isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ES.1.1	chr1	-	179	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	3427622	3427443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_3427400_3427600
ES.10.1	chr1	-	299	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGTGAGAGAAATAT	NA	False	NA	NA	False	AAAACA	-27	NA	4837649	4837350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4837400_4837600
ES.100.1	chr1	+	233	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGTTTAAACTATTGC	NA	False	NA	NA	False	AAGAAA	-34	NA	12705425	12705658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_12705400_12705700
ES.1000.1	chr1	-	2068	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-4	-4	-4	1	multi-exon	FALSE	canonical	3	59	junction_8	12	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAATTTGGTCACTGGA	NA	False	NA	0	True	AATAAA	-21	NA	90017870	89969852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ES.1000.2	chr1	-	2074	12	NNC	ENSMUSG00000026301.17	novel	2060	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	22.6412919060188	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTAATTTGGTCACTG	NA	False	NA	-2	True	AATAAA	-19	NA	90017868	89969854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017643
ES.1000.4	chr1	-	2114	12	NNC	ENSMUSG00000026301.17	novel	2060	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.1524086371361	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGACTCAGTAATTTG	NA	False	NA	-9	True	AATAAA	-12	NA	90017868	89969861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017320_90017643
ES.1000.5	chr1	-	1721	10	NIC	ENSMUSG00000026301.17	novel	2060	12	NA	NA	-2	-28	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.1607603308052	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACATAATGAAATAAAGCT	NA	False	NA	-37	True	AATAAA	-23	NA	90017868	89969889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ES.1000.6	chr1	-	2195	11	NNC	ENSMUSG00000026301.17	novel	3210	19	NA	NA	-2	-3928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3724259778209	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCCCCTCCAAGACCT	NA	False	NA	NA	False	NA	NA	NA	90017868	89974275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_89974541_89974795_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ES.1000.7	chr1	-	1341	10	ISM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	5528	-2	-5037	5prime_fragment	FALSE	canonical	3	59	junction_6	13.200261875442	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGTAGCTATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	90017868	89975384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ES.1000.8	chr1	-	1576	9	ISM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	-2	9714	-2	7608	5prime_fragment	FALSE	canonical	3	59	junction_5	13.5346776836392	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACGGGCTTGTTATTC	NA	False	NA	NA	False	NA	NA	NA	90017868	89979570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ES.10000.1	chr13	+	862	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-23	-44	-23	44	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAAAAAATGCAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	108807113	108807975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108807100_108808000
ES.10001.1	chr13	+	2620	1	Intergenic	novelGene_8349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109420708	109423328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109420700_109423300
ES.10002.1	chr13	+	1362	1	Intergenic	novelGene_8350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATATCATGAATCGTA	NA	False	NA	NA	False	AATAAA	-29	NA	109508955	109510317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109509000_109510300
ES.10003.1	chr13	+	645	1	Intergenic	novelGene_8351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109536028	109536673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109536000_109536700
ES.10004.1	chr13	-	1690	6	Antisense	novelGene_ENSMUSG00000021699.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.979795897113271	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGGACATTTCTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	109543286	109518361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_109518673_109520176_109520318_109520588_109520872_109522243_109522959_109535660_109535775_109543160
ES.10005.1	chr13	+	4028	1	Intergenic	novelGene_8352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAAGCTCACACACGG	NA	False	NA	NA	False	NA	NA	NA	109573946	109577974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109573900_109578000
ES.10006.1	chr13	-	175	1	Intergenic	novelGene_8353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	109598128	109597953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_109598000_109598100
ES.10007.1	chr13	+	1156	1	Intergenic	novelGene_8354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAATCACAACATAGAAC	NA	False	NA	NA	False	NA	NA	NA	109721026	109722182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109721000_109722200
ES.10008.1	chr13	+	7041	16	NNC	ENSMUSG00000021699.18	novel	2123	15	NA	NA	-221	2505	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.3952980824131	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATTTTGTCTCTTACA	NA	False	NA	5	True	AATAAA	-24	NA	109769092	110092500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_109769445_109832709_109832805_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.10	chr13	+	3195	1	Intergenic	novelGene_8360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTGTATGCT	9043	False	NA	NA	False	NA	NA	NA	109961150	109964345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109961200_109964300
ES.10008.11	chr13	+	3307	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	-519	1419	-515	568	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTACCACTGGTTTTTG	NA	False	NA	NA	False	TTTAAA	-28	NA	110039120	110088576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.12	chr13	+	3205	11	FSM	ENSMUSG00000021699.18	ENSMUST00000119672.8	2051	11	-497	-657	-497	570	multi-exon	FALSE	canonical	3	11	junction_1	6.78896162899747	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCACTGGTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-30	NA	110039138	110088578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110040025_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.13	chr13	+	5741	11	FSM	ENSMUSG00000021699.18	ENSMUST00000119672.8	2051	11	-409	-3281	-409	1207	multi-exon	FALSE	canonical	3	11	junction_1	6.78896162899747	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGTGAGAGAATGAAT	NA	False	NA	NA	False	ATTAAA	-41	NA	110039226	110091202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110040025_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.14	chr13	+	4264	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	-27	-30	-23	30	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAGGCTAGTGACTG	NA	False	NA	NA	False	AATAAA	-12	NA	110039612	110090025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.15	chr13	+	6070	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	139	-2002	139	2002	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTGTGTCCACGT	NA	False	NA	NA	False	AATAAA	-21	NA	110039778	110091997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.16	chr13	+	4889	9	NNC	ENSMUSG00000021699.18	novel	4207	10	NA	NA	72	2505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	10.3433251423321	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATTTTGTCTCTTACA	NA	False	NA	5	True	AATAAA	-24	NA	110071917	110092500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464_110088981_110090047
ES.10008.2	chr13	+	3005	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-218	-664	-218	554	multi-exon	FALSE	canonical	1	3	junction_1	7.84544583871199	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCAGAACTTCATCT	NA	False	NA	NA	False	ATTAAA	-37	NA	109769095	110088562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.3	chr13	+	2983	15	NNC	ENSMUSG00000021699.18	novel	2123	15	NA	NA	-218	538	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	10.2710709256233	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAACAAAACTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	109769095	110088546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087470
ES.10008.4	chr13	+	6944	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-218	-4603	-218	2506	multi-exon	FALSE	canonical	1	3	junction_1	7.84544583871199	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATTTTGTCTCTTACAA	NA	False	NA	6	True	AATAAA	-25	NA	109769095	110092501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.5	chr13	+	5620	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	-161	-3336	-161	1239	multi-exon	FALSE	canonical	1	3	junction_1	7.84544583871199	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTTGTACATTTTTCT	NA	False	NA	NA	False	AATGAA	-14	NA	109769152	110091234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.6	chr13	+	3391	15	FSM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	-651	-573	-651	573	multi-exon	FALSE	canonical	2	10	junction_1	6.47640931002824	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTGGTTTTTGTTTTT	NA	False	NA	NA	False	TTTAAA	-33	NA	109822038	110088581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_109822755_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.7	chr13	+	4466	1	Genic_Genomic	ENSMUSG00000021699.18	novel	NA	NA	NA	NA	-553	-71544	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACTCGTGAAACTTTC	NA	False	NA	NA	False	NA	NA	NA	109822136	109826602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_109822100_109826600
ES.10008.8	chr13	+	6534	15	FSM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	-378	-3989	-378	2002	multi-exon	FALSE	canonical	2	10	junction_1	6.47640931002824	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTGTGTCCACGT	NA	False	NA	NA	False	AATAAA	-21	NA	109822311	110091997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_109822755_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ES.10008.9	chr13	+	4152	1	Intergenic	novelGene_8358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109862670	109866822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_109862700_109866800
ES.10009.1	chr13	-	177	1	Intergenic	novelGene_8355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATATAAACTG	NA	False	NA	NA	False	NA	NA	NA	109794889	109794712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_109794700_109794900
ES.1001.1	chr1	+	2015	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	19	1031	-7	-1031	multi-exon	FALSE	canonical	3	47	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCATGTGTGCTTTG	NA	False	NA	6	True	AATAAA	-14	NA	90131720	90143442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90131810_90141516
ES.10010.1	chr13	-	5538	15	Antisense	novelGene_ENSMUSG00000084651.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	110090692	109822002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_109822754_109876919_109877113_109894110_109894146_109906065_109906142_109909164_109909212_110040107_110040222_110070399_110070495_110071838_110072009_110073206_110073308_110074498_110074664_110075793_110075896_110084773_110084929_110085947_110086066_110086737_110086923_110087461
ES.10010.2	chr13	-	173	1	Intergenic	novelGene_8356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	109825553	109825380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_109825400_109825600
ES.10010.3	chr13	-	197	1	Intergenic	novelGene_8357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATGGTACATCTGTGTG	3438	False	NA	NA	False	NA	NA	NA	109834221	109834024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_109834000_109834200
ES.10010.4	chr13	-	1568	4	Antisense	novelGene_ENSMUSG00000021699.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGGACTCACAACACT	NA	False	NA	NA	False	AATAAA	-18	NA	109941529	109929779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_109931130_109936968_109937073_109938747_109938826_109941493
ES.10010.5	chr13	-	301	1	Intergenic	novelGene_8359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCAATGAGGACCTGC	NA	False	NA	NA	False	NA	NA	NA	109951729	109951428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_109951400_109951700
ES.10010.6	chr13	-	2641	1	Antisense	novelGene_ENSMUSG00000021699.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAATGCTGGGTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110039721	110037080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_110037100_110039700
ES.10011.1	chr13	+	176	1	Intergenic	novelGene_8361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTCATAGACTCAA	NA	False	NA	NA	False	NA	NA	NA	110300821	110300997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_110300800_110301000
ES.10012.1	chr13	+	2833	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	-33	0	-33	0	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531546	110537378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ES.10012.2	chr13	+	3006	13	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_2	11.4842887846348	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531581	110537378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ES.10012.3	chr13	+	3628	10	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_2	13.1571695706604	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531581	110537378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110535343_110535554_110536408_110536566
ES.10012.4	chr13	+	2794	13	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	1	-90	intron_retention	FALSE	canonical	3	65	junction_2	11.5190060335083	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCCAAGAGCAGTATTTA	NA	False	NA	-84	True	AATAAA	-16	NA	110531582	110537288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ES.10012.5	chr13	+	3047	13	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	1	-3	intron_retention	FALSE	canonical	3	65	junction_2	11.4842887846348	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTCCTGTCCT	NA	False	NA	3	True	AATAAA	-14	NA	110531582	110537375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536408_110536566
ES.10012.6	chr13	+	2744	14	NNC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	25.5143537743112	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531582	110537378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536400_110536611
ES.10012.7	chr13	+	3045	13	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	1	-3	intron_retention	FALSE	canonical	3	65	junction_2	11.5277443105271	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTCCTGTCCT	NA	False	NA	3	True	AATAAA	-14	NA	110531582	110537375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ES.10012.8	chr13	+	2915	12	NIC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	1	-87	intron_retention	FALSE	canonical	3	65	junction_2	12.0103261356342	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGAGCAGTATTTATTA	NA	False	NA	-81	True	AATAAA	-19	NA	110531582	110537291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534656_110534906_110535005_110535212_110535343_110535554_110536044_110536296_110536408_110536566
ES.10012.9	chr13	+	2632	14	NNC	ENSMUSG00000021701.9	novel	2800	14	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.8267368759031	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTCCTGTCCT	NA	False	NA	3	True	AATAAA	-14	NA	110531583	110537375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535276_110535648_110535796_110535913_110536044_110536296_110536408_110536566
ES.10013.1	chr13	-	1588	1	Antisense	novelGene_ENSMUSG00000021701.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGCAGTTGGGTAGAA	7390	False	NA	NA	False	NA	NA	NA	110538062	110536474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_110536500_110538100
ES.10014.1	chr13	+	180	1	Intergenic	novelGene_8362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	110666456	110666636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_110666500_110666600
ES.10015.1	chr13	+	178	1	Intergenic	novelGene_8363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111349471	111349649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111349500_111349600
ES.10016.1	chr13	+	173	1	Intergenic	novelGene_8364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCAAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	111533201	111533374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111533200_111533400
ES.10017.1	chr13	+	172	1	Intergenic	novelGene_8365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAACAAACAA	2139	False	NA	NA	False	NA	NA	NA	111580180	111580352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111580200_111580400
ES.10018.1	chr13	+	157	1	Intergenic	novelGene_8366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	111599789	111599946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111599800_111599900
ES.10019.1	chr13	+	519	2	Antisense	novelGene_ENSMUSG00000116016.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCTATCAAGATTCCAAC	NA	False	NA	NA	False	AATAAA	-18	NA	111654257	111657683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_111654348_111657254
ES.1002.1	chr1	+	3036	3	Genic_Genomic	ENSMUSG00000103292.2	novel	2802	1	NA	NA	-4596	-478	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	90443621	90450541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_90444000_90445862_90446049_90448069
ES.1002.2	chr1	+	3067	1	FSM	ENSMUSG00000103292.2	ENSMUST00000192105.2	2802	1	-720	455	-720	-455	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACGATAGCTAAACTT	NA	False	NA	NA	False	AAAAAG	-37	NA	90447497	90450564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90447500_90450600
ES.1002.3	chr1	+	5185	2	Genic_Genomic	ENSMUSG00000103292.2	novel	2802	1	NA	NA	-697	5155	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAAGTTCACGCTTGCTT	NA	False	NA	NA	False	TTTAAA	-15	NA	90447520	90456174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_90448253_90451721
ES.10020.1	chr13	+	177	1	Intergenic	novelGene_8368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGGCTGGTAGAAG	NA	False	NA	NA	False	NA	NA	NA	111681201	111681378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111681200_111681400
ES.10021.1	chr13	+	964	2	Intergenic	novelGene_8370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGAAAACCAAACCCAGGAA	251	False	NA	NA	False	NA	NA	NA	111686575	111688714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111686713_111687887
ES.10021.2	chr13	+	619	2	Intergenic	novelGene_8371	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGTAAAATTAAAAAAA	254	False	NA	NA	False	NA	NA	NA	111686578	111688372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111686713_111687887
ES.10021.3	chr13	+	463	2	Intergenic	novelGene_8372	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAGATACATGAAAGGA	255	False	NA	NA	False	AATATA	-16	NA	111686579	111688217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111686713_111687887
ES.10022.1	chr13	+	1218	1	Intergenic	novelGene_8373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTCTCAGGGGCGTTA	3300	False	NA	NA	False	NA	NA	NA	111691069	111692287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111691100_111692300
ES.10023.1	chr13	+	2566	1	Intergenic	novelGene_8374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAGTAGAGACTGCAG	5435	False	NA	NA	False	NA	NA	NA	111693204	111695770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111693200_111695800
ES.10024.1	chr13	+	670	4	FSM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	-38	-11	-38	11	multi-exon	FALSE	canonical	3	14	junction_3	8.73053390247253	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTTGTGTACAGATT	823	False	NA	8	True	NA	NA	NA	111716756	111781375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111716936_111717450_111717511_111778756_111779023_111781210
ES.10024.10	chr13	+	5082	13	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-50	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.1432134680532	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTTTGTATTTGTTG	NA	False	NA	2	True	CATAAA	-15	NA	111822661	111855059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841937_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111852115_111852264
ES.10024.11	chr13	+	3622	14	NNC	ENSMUSG00000032727.15	novel	5165	14	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	34.1659715135902	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	8	True	AATAAA	-16	NA	111822687	111855129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111851371_111853050
ES.10024.12	chr13	+	4187	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	54	1038	-16	-78	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGACTTATTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	111822765	111854092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.13	chr13	+	3625	14	NNC	ENSMUSG00000032727.15	novel	5165	14	NA	NA	-15	-77	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	33.6740378986894	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGACTTATTTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	111822766	111854093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111851703_111852264
ES.10024.15	chr13	+	4259	13	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-14	13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTTGCAATCGTATGA	NA	False	NA	NA	False	ATTAAA	-27	NA	111822767	111854183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111822872_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.17	chr13	+	4262	12	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-13	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.5246435544121	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTTGCAATCGTATGA	NA	False	NA	NA	False	ATTAAA	-27	NA	111822768	111854183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111827757_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.18	chr13	+	4659	14	NNC	ENSMUSG00000032727.15	novel	5165	14	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	33.6740378986894	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	8	True	AATAAA	-16	NA	111822768	111855129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111851703_111852264
ES.10024.19	chr13	+	5293	12	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	88	junction_1	13.7930393272947	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCTGGGTCGTGTGA	NA	False	NA	5	True	AATAAA	-13	NA	111822769	111855126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111851122_111851217
ES.10024.2	chr13	+	5151	12	Fusion	ENSMUSG00000086649.2_ENSMUSG00000032727.15	novel	621	4	NA	NA	-18	1	multi-exon	FALSE	canonical	0	0	junction_2	42.9423984748973	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCGTGTGACTATT	843	False	NA	10	True	AATAAA	-18	NA	111716776	111855131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_111716936_111717450_111717511_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.20	chr13	+	5071	14	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	33.9198498377831	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111822769	111855130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111852115_111852264
ES.10024.21	chr13	+	5233	13	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-7	34	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCAGTCTTTTTTTTTT	NA	False	NA	43	True	AAAAAG	-4	NA	111822774	111855164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111822872_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.22	chr13	+	4994	12	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-10	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	37.0652763478677	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTCGTGTGACT	NA	False	NA	7	True	AATAAA	-15	NA	111822848	111855128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111822889_111824361_111824387_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.23	chr13	+	3971	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	138	1170	-9	-210	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATTCAATATTTTCTG	NA	False	NA	NA	False	AGTAAA	-19	NA	111822849	111853960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.24	chr13	+	1878	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	141	3260	-6	-2300	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCGCAGAGTTGGGAAC	NA	False	NA	NA	False	CATAAA	-16	NA	111822852	111851870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.26	chr13	+	6592	12	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	97	junction_8	10.436743737139	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111822871	111855130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.28	chr13	+	3080	13	NIC	ENSMUSG00000032727.15	novel	4243	13	NA	NA	11	-1610	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGTTTGTTCCGAGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	111822895	111852560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111823444_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.29	chr13	+	5497	13	NIC	ENSMUSG00000032727.15	novel	16	2	NA	NA	164	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.9757852743231	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111823048	111855130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111823444_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.3	chr13	+	1261	3	ISM	ENSMUSG00000086649.2	ENSMUST00000156236.2	621	4	26	1522	26	473	5prime_fragment	FALSE	canonical	3	32	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAAAGTGTATGAGTT	887	False	NA	NA	False	NA	NA	NA	111716820	111779842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_111716936_111717450_111717511_111778756
ES.10024.30	chr13	+	4539	13	NNC	ENSMUSG00000032727.15	novel	5165	14	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	34.446415714201	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCTGGGTCGTGTGAC	NA	False	NA	6	True	AATAAA	-14	NA	111824359	111855127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111851703_111852264
ES.10024.31	chr13	+	5098	12	ISM	ENSMUSG00000032727.15	ENSMUST00000047412.11	4243	13	1475	-957	327	0	3prime_fragment	FALSE	canonical	3	8	junction_8	34.0048611012072	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCTGGGTCGTGTGAC	NA	False	NA	6	True	AATAAA	-14	NA	111824359	111855127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848222_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.32	chr13	+	3279	9	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	5265	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.8455551437363	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111842583	111855130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111851703_111853050
ES.10024.4	chr13	+	178	1	Intergenic	novelGene_8375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	111731958	111732136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111732000_111732100
ES.10024.5	chr13	+	5569	12	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-265	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.5246435544121	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTTTTTTTTTTTTTT	NA	False	NA	47	True	AAAAAG	-8	NA	111822446	111855168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822889_111827757_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.6	chr13	+	5424	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	-145	0	-145	0	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111822566	111855130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.7	chr13	+	2853	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	-144	2570	-144	-1610	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGTTTGTTCCGAGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	111822567	111852560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10024.8	chr13	+	6736	13	NNC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	-125	-1	intron_retention	FALSE	canonical	0	0	junction_1	46.1832100323147	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGGTCGTGTGACTA	NA	False	NA	8	True	AATAAA	-16	NA	111822586	111855129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111822872_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217_111852115_111852264
ES.10024.9	chr13	+	4528	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	-125	876	-125	84	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGATGAATTCTTTG	NA	False	NA	NA	False	AAAACA	-43	NA	111822586	111854254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ES.10025.1	chr13	-	5598	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	270	-2174	187	2174	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATCATCCTCTGTCTT	NA	False	NA	NA	False	AATATA	-25	NA	111626375	111560039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.10	chr13	-	3666	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	28	0	28	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626617	111562213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.11	chr13	-	7655	6	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	7954	0	intron_retention	TRUE	non_canonical	0	0	junction_5	486.862608956572	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111581962	111562213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111577702_111577802
ES.10025.14	chr13	-	3419	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	324.420594633297	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626376	111562213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563180_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.15	chr13	-	3391	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	149	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	326.935646063054	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626413	111562213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624963_111626380
ES.10025.16	chr13	-	3401	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	163	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	328.27591503016	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626399	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574614_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.17	chr13	-	3581	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	153	-2	intron_retention	FALSE	canonical	3	874	junction_7	128.213471269114	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626409	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.18	chr13	-	5354	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	-124	-2	intron_retention	FALSE	canonical	3	20	junction_6	335.743974672556	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111624370	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956
ES.10025.19	chr13	-	3309	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	-187277	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	415.481626848313	959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111813922	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589673_111589906_111590031_111603384_111603505_111623956_111624905_111626251_111626354_111813904
ES.10025.2	chr13	-	5680	14	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	185	2168	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	408.363554812875	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTATTTCATCATCCTC	NA	False	NA	NA	False	AATATA	-19	NA	111626377	111560045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.20	chr13	-	3223	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	162	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	340.23314806368	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626400	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.21	chr13	-	3511	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	164	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	417.62088920526	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626398	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111597457_111597524_111603384_111603505_111623956_111624905_111626251
ES.10025.22	chr13	-	3444	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	149	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	475.732819948689	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626413	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577296_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111620304_111620420_111623956_111624905_111626251
ES.10025.23	chr13	-	3283	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	329.778924264254	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTCTTTGTAG	NA	False	NA	-6	True	AATAAA	-13	NA	111626404	111562215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111624124_111624905_111626251
ES.10025.24	chr13	-	3342	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	185	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	387.730565903099	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGTTGTTCTTTGTA	NA	False	NA	-7	True	AATAAA	-12	NA	111626377	111562216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589927_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.26	chr13	-	3349	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	449	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_11	383.30008958737	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGTTGTTCTTTGTA	NA	False	NA	-7	True	AATAAA	-12	NA	111626113	111562216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626001
ES.10025.28	chr13	-	3418	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	440	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_12	325.395400500171	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGTTGTTCTTTGTA	NA	False	NA	-7	True	AATAAA	-12	NA	111626122	111562216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626001
ES.10025.3	chr13	-	5091	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	206	-1998	206	1746	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTTGGCTTTTGGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	111626356	111560467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.30	chr13	-	3376	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	185	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	330.115752005599	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626377	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111589985_111603384_111603505_111623956_111624905_111626251
ES.10025.31	chr13	-	3425	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	172	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	327.350506592959	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626390	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584476_111585462_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.32	chr13	-	3615	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	184	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	400.212798425623	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626378	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111564191_111564384_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.33	chr13	-	3499	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	163	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	460.975437704295	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626399	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111620304_111620420_111623956_111624905_111626251
ES.10025.34	chr13	-	3288	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	188	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	322.697183474263	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626374	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577296_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.36	chr13	-	3508	14	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	185	-4	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	408.363554812875	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626377	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.37	chr13	-	3475	13	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	426.250480612306	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	111626404	111562217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.38	chr13	-	3251	11	NIC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	174	-6	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	404.668123281288	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATATTGTTGTTCTTT	NA	False	NA	-10	True	AATAAA	-9	NA	111626388	111562219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ES.10025.39	chr13	-	3052	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	149	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	417.62088920526	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCTTAAAATGTTCAG	NA	False	NA	0	True	AATAAA	-25	NA	111626413	111562689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111597457_111597524_111603384_111603505_111623956_111624905_111626251
ES.10025.4	chr13	-	4907	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	269	-1482	186	1482	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTCTGATGTTGGAAGC	NA	False	NA	NA	False	NA	NA	NA	111626376	111560731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.40	chr13	-	3211	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	5	478	5	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626640	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.41	chr13	-	2955	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	184	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	461.032258150724	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626378	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111597457_111597524_111603384_111603505_111623956_111624905_111626251
ES.10025.42	chr13	-	6545	6	NNC	ENSMUSG00000032745.19	novel	1940	11	NA	NA	8585	0	intron_retention	TRUE	canonical	0	0	junction_5	486.862608956572	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111581331	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111577703_111577804
ES.10025.43	chr13	-	7497	4	NIC	ENSMUSG00000032745.19	novel	1940	11	NA	NA	8699	0	intron_retention	FALSE	canonical	3	1188	junction_2	24.4994331000173	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111581217	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111575779_111577165
ES.10025.45	chr13	-	3070	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	3	226	3	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626559	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.46	chr13	-	2809	11	NIC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	144	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	404.668123281288	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626418	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ES.10025.47	chr13	-	5751	1	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	21474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	909	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111568442	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111562700_111568400
ES.10025.48	chr13	-	3061	14	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	408.363554812875	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626404	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.5	chr13	-	4723	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	260	-1289	177	1289	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGATAAGGATTTAGAA	NA	False	NA	NA	False	AATATA	-12	NA	111626385	111560924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.50	chr13	-	2951	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	432	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_12	325.395400500171	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626130	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626001
ES.10025.51	chr13	-	2864	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	149	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	340.73585901668	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626413	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ES.10025.52	chr13	-	4038	12	ISM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	525	478	442	0	3prime_fragment	FALSE	canonical	3	874	junction_7	126.242518802973	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626120	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956
ES.10025.54	chr13	-	3012	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	434.970656737006	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626376	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579413_111579539_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.56	chr13	-	2733	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	176	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	340.23314806368	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626386	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.57	chr13	-	3001	13	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	158	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	426.250480612306	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626404	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.59	chr13	-	3061	14	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	187	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	417.823962818464	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626375	111562691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111620304_111620420_111623956_111624905_111626251
ES.10025.6	chr13	-	4370	12	ISM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	1739	-1068	-660	1068	3prime_fragment	FALSE	canonical	3	874	junction_7	126.242518802973	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTACAAATGCAGAGTGGT	NA	False	NA	NA	False	AGTAAA	-22	NA	111624906	111561145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956
ES.10025.60	chr13	-	4025	13	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	169	-2	intron_retention	FALSE	canonical	3	20	junction_7	424.40435383671	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGTCTTAAAATGT	NA	False	NA	-4	True	AATAAA	-21	NA	111626393	111562693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.61	chr13	-	11134	10	NIC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	177	-3	intron_retention	FALSE	canonical	3	984	junction_7	99.5902717248137	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626385	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111585534_111589557_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.62	chr13	-	2641	12	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	201	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	344.78406225749	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626361	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111624124_111624905_111626251
ES.10025.63	chr13	-	6969	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	185	-3	intron_retention	FALSE	canonical	3	874	junction_7	127.6532622846	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626377	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.64	chr13	-	4153	10	NIC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	184	-3	intron_retention	FALSE	canonical	3	15	junction_8	416.419926943411	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626378	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ES.10025.65	chr13	-	5129	4	ISM	ENSMUSG00000032745.19	ENSMUST00000136471.9	1940	11	45409	3	11079	-3	intron_retention	FALSE	canonical	3	1188	junction_2	41.1528316833187	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111578837	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490
ES.10025.68	chr13	-	2954	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	185	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	326.935646063054	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626377	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624914_111626251
ES.10025.69	chr13	-	2967	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	115	-3	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	323.920214799193	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626447	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574611_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.7	chr13	-	4256	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	252	-814	169	814	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGGAGCATCTTTGT	NA	False	NA	NA	False	AATAGA	-12	NA	111626393	111561399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.70	chr13	-	2860	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	185	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	341.116712534358	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626377	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577326_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.71	chr13	-	9944	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	163	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	329.780314081292	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626399	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577703_111577804_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.72	chr13	-	8854	5	NNC	ENSMUSG00000032745.19	novel	1940	11	NA	NA	7252	-3	intron_retention	FALSE	canonical	0	0	junction_4	535.668915935954	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111582664	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111577703_111577804
ES.10025.73	chr13	-	2933	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	187	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	329.780314081292	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626375	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584439_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.75	chr13	-	2831	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	177	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	513.440107316962	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626385	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111564191_111564354_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.76	chr13	-	3085	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	168	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	443.182641996126	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTCTGTCTTAAAATG	NA	False	NA	-5	True	AATAAA	-20	NA	111626394	111562694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111564191_111564375_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.77	chr13	-	2861	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	158	-6	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	382.366402964097	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAGCTTCTGTCTTAAA	NA	False	NA	-8	True	AATAAA	-17	NA	111626404	111562697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574611_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.78	chr13	-	2788	12	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	186	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	341.116712534358	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAGCTTCTGTCTTAAA	NA	False	NA	-8	True	AATAAA	-17	NA	111626376	111562697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577258_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10025.79	chr13	-	3867	11	NNC	ENSMUSG00000032745.19	novel	3299	12	NA	NA	547	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	401.093517773599	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAAGCTTCTGTCTTAA	NA	False	NA	-9	True	AATAAA	-16	NA	111626015	111562698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589783_111589906_111590031_111603384_111603505_111623956
ES.10025.8	chr13	-	3367	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	149	25	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	340.73585901668	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGGTCTCTACACATG	NA	False	NA	21	True	AATAAA	-40	NA	111626413	111562188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ES.10025.80	chr13	-	4063	11	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	-519	-7	intron_retention	FALSE	canonical	3	874	junction_6	122.981340047993	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAAAGCTTCTGTCTTAA	NA	False	NA	-9	True	AATAAA	-16	NA	111624765	111562698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956
ES.10025.81	chr13	-	1944	2	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	149	60657	149	-45847	5prime_fragment	FALSE	canonical	3	1177	junction_1	0	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGAAACATCTTATTG	NA	False	NA	NA	False	NA	NA	NA	111626413	111623122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_111624905_111626251
ES.10025.82	chr13	-	3469	1	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	29	-45872	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	857	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111626616	111623147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111623100_111626600
ES.10025.83	chr13	-	174	1	Intergenic	novelGene_8367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAACTCTGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	111647113	111646939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111646900_111647100
ES.10025.84	chr13	-	450	2	FSM	ENSMUSG00000085634.3	ENSMUST00000132880.3	663	2	212	1	212	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTTTTTTTTGTTTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	111686233	111658884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111659245_111686143
ES.10025.85	chr13	-	152	1	Intergenic	novelGene_8369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAATCGGATTGAGCGT	NA	False	NA	NA	False	NA	NA	NA	111683753	111683601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111683600_111683800
ES.10025.86	chr13	-	5811	1	Antisense	novelGene_ENSMUSG00000086649.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111755402	111749591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_111749600_111755400
ES.10025.87	chr13	-	159	1	Intergenic	novelGene_8376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	2709	False	NA	NA	False	NA	NA	NA	111806816	111806657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111806700_111806800
ES.10025.88	chr13	-	267	1	Intergenic	novelGene_8377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAACTTAGGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	111813397	111813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111813100_111813400
ES.10025.9	chr13	-	3626	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	-74	-253	9	1	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTCTTTGTAGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	111626636	111562212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ES.10026.1	chr13	-	176	1	Intergenic	novelGene_8378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	111840660	111840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111840500_111840700
ES.10027.1	chr13	-	1213	1	Genic_Genomic	ENSMUSG00000084217.3	novel	NA	NA	NA	NA	-802	-2445	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCAGACTTTTAATT	NA	False	NA	NA	False	AATAAA	-19	NA	111861670	111860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_111860500_111861700
ES.10028.1	chr13	+	3491	2	NNC	ENSMUSG00000086480.2	novel	751	2	NA	NA	67	2763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACCCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	111862117	111874421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_111865103_111873915
ES.10028.2	chr13	+	4937	1	Genic_Genomic	ENSMUSG00000086480.2	novel	NA	NA	NA	NA	6842	2171	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTGAGTACGGTCTC	881	False	NA	NA	False	NA	NA	NA	111868892	111873829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_111868900_111873800
ES.10029.1	chr13	+	612	1	Antisense	novelGene_ENSMUSG00000021754.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCAAAAACCTAACCCAA	NA	False	NA	NA	False	NA	NA	NA	111884390	111885002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_111884400_111885000
ES.1003.2	chr1	-	2908	6	Antisense	novelGene_ENSMUSG00000103292.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.4	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTGCCTTGTGCC	NA	False	NA	NA	False	AATAAA	-19	NA	90498128	90444600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_90446135_90447893_90448025_90466844_90466910_90473038_90473165_90475374_90476243_90497944
ES.1003.3	chr1	-	1565	3	Antisense	novelGene_ENSMUSG00000103292.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTTCTCTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	90449056	90444894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_90446135_90447893_90448025_90448862
ES.1003.4	chr1	-	2328	6	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCAGGTCCCTGCGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	90499438	90461494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_90462406_90466844_90466910_90473038_90473165_90475374_90476243_90497944_90498130_90499265
ES.10030.1	chr13	+	172	1	Intergenic	novelGene_8379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111907517	111907689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_111907500_111907700
ES.10031.1	chr13	+	1562	1	NIC	ENSMUSG00000085204.2	novel	347	2	NA	NA	38	-183	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCCGGCAAAAGGTGA	8620	False	NA	NA	False	NA	NA	NA	111945712	111947274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_111945700_111947300
ES.10032.1	chr13	-	6980	20	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	14.9662593745929	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTATTTTGGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	111945532	111882961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912404_111912553_111945036
ES.10032.10	chr13	-	6808	20	FSM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	8	162	8	-162	multi-exon	FALSE	canonical	3	32	junction_8	9.29659038560826	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGGTTAAAAAAATTTG	NA	False	NA	NA	False	NA	NA	NA	111945519	111883123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ES.10032.11	chr13	-	1615	3	ISM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	15	25381	15	-3825	5prime_fragment	FALSE	canonical	3	52	junction_2	6.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATTTGAGGTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	111945512	111908342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_111909331_111912401_111912553_111945036
ES.10032.4	chr13	-	3381	7	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	-441	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	23.4976358148834	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTATTTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	111891679	111882964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891172_111891330_111891644
ES.10032.5	chr13	-	7257	19	NIC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	7	-5	intron_retention	FALSE	canonical	3	39	junction_10	7.87557562074193	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	111945520	111882966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ES.10032.6	chr13	-	6906	20	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.7998652385869	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	111945540	111882966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111885584_111886976_111887109_111887752_111887823_111888905_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ES.10032.8	chr13	-	6614	20	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	-758	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	15.2947042416431	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGGTATTTTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	111946285	111882966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111946153
ES.10032.9	chr13	-	6963	20	NNC	ENSMUSG00000021754.18	novel	6978	20	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.7364661606183	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGTTAACTGGTATTT	NA	False	NA	NA	False	AATAAA	-10	NA	111945525	111882972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890443_111891185_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ES.10033.1	chr13	-	213	1	Intergenic	novelGene_8380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	111961405	111961192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_111961200_111961400
ES.10034.1	chr13	+	178	1	Intergenic	novelGene_8381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAATTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	112133959	112134137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_112134000_112134100
ES.10035.1	chr13	-	2699	1	Intergenic	novelGene_8382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGCTTTGTATGTGGT	NA	False	NA	NA	False	NA	NA	NA	112490790	112488091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_112488100_112490800
ES.10036.1	chr13	-	1496	2	FSM	ENSMUSG00000114656.2	ENSMUST00000224082.2	1622	2	111	15	111	-15	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAATAAAAACAAAAA	8245	False	NA	NA	False	NA	NA	NA	112553788	112551486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_112552875_112553680
ES.10037.1	chr13	+	5598	19	NNC	ENSMUSG00000021756.13	novel	5207	15	NA	NA	-37688	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.436337814301	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	NA	False	NA	24	True	AATAAA	-25	NA	112562915	112643383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112563005_112565196_112565318_112566252_112566381_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.10	chr13	+	5321	16	FSM	ENSMUSG00000021756.13	ENSMUST00000184311.8	2985	16	10	-2346	10	-23	multi-exon	FALSE	canonical	2	7	junction_1	97.956770510715	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTCGTATTCTTTCG	NA	False	NA	12	True	AATAAA	-13	NA	112600624	112643371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.11	chr13	+	5090	15	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	12	-23	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	102.955037739386	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTCGTATTCTTTCG	NA	False	NA	12	True	AATAAA	-13	NA	112600626	112643371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.12	chr13	+	5359	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	12	-18	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	97.6395635744036	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600626	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631272_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.13	chr13	+	5072	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	12	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	125.406588742378	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCGTGTGTAAAAAT	NA	False	NA	23	True	AATAAA	-24	NA	112600626	112643382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238_112641598_112641855
ES.10037.14	chr13	+	7755	16	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	12	-745	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	98.6561706128917	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGCTGCTGTCTTTTC	NA	False	NA	7	True	AATAAA	-7	NA	112600626	112645875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.15	chr13	+	5316	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	12	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	95.8251363025634	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600626	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635311_112635405_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.16	chr13	+	5362	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	12	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	126.970945864595	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGCTCGTATTCTTTC	NA	False	NA	11	True	AATAAA	-12	NA	112600626	112643370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616563_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633816_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.17	chr13	+	7817	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	12	-742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	95.8251363025634	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGCTGTCTTTTCTGT	NA	False	NA	10	True	AATAAA	-10	NA	112600626	112645878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238_112645020_112645115
ES.10037.18	chr13	+	5955	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	23	2700	12	526	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGACTGTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	112600626	112643920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.19	chr13	+	3901	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	25	4752	14	789	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACCTTGTTTTGATTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	112600628	112641868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.2	chr13	+	5453	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	-12	3237	-12	-11	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	NA	False	NA	24	True	AATAAA	-25	NA	112600591	112643383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.21	chr13	+	3920	14	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-10	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	106.629758160861	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCGTATTCTTTCGTG	NA	False	NA	14	True	AATAAA	-15	NA	112600635	112643373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634291_112641285
ES.10037.22	chr13	+	2286	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-10	497	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTCTTCTGCATAGCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	112600635	112620647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
ES.10037.23	chr13	+	4642	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	32	4004	-10	-778	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTTTCTGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	112600635	112642616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.24	chr13	+	2817	5	ISM	ENSMUSG00000021756.13	ENSMUST00000184276.8	3009	18	-139	20926	-10	3	5prime_fragment	FALSE	canonical	3	401	junction_2	8.38152730712011	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCCAATATTATTGCTGG	NA	False	NA	NA	False	AATAAA	-22	NA	112600635	112620153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957
ES.10037.25	chr13	+	5401	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-10	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.8193388481867	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCGTGTGTAAAAATG	NA	False	NA	24	True	AATAAA	-25	NA	112600635	112643383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616817_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.26	chr13	+	5707	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	-9	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	122.479035703467	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTCGTATTCTTTCG	NA	False	NA	12	True	AATAAA	-13	NA	112600636	112643371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607087_112607399_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.27	chr13	+	7886	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-4	-745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.756533509275	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGCTGCTGTCTTTTC	NA	False	NA	7	True	AATAAA	-7	NA	112600641	112645875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609199_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.28	chr13	+	5386	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-4	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.5614389756527	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCGTATTCTTTCGTGT	NA	False	NA	15	True	AATAAA	-16	NA	112600641	112643374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600777_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.3	chr13	+	5360	16	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-4	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	101.559703294827	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTCGTGTGTAAAAA	NA	False	NA	22	True	AATAAA	-23	NA	112600599	112643381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.30	chr13	+	5453	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	-2	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.738338725668	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600643	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112622274_112622335_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.31	chr13	+	7810	16	FSM	ENSMUSG00000021756.13	ENSMUST00000184311.8	2985	16	31	-4856	0	-739	multi-exon	FALSE	canonical	2	7	junction_1	97.956770510715	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	112600645	112645881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.32	chr13	+	6011	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	1	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	122.757053229731	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600646	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112611988_112612610_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.33	chr13	+	3299	5	ISM	ENSMUSG00000021756.13	ENSMUST00000184276.8	3009	18	-128	20433	1	496	5prime_fragment	FALSE	canonical	3	401	junction_2	8.38152730712011	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTCTTCTGCATAGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	112600646	112620646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957
ES.10037.34	chr13	+	1247	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	163.571880223955	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACACCGTTCCAATATTA	NA	False	NA	NA	False	AATAAA	-15	NA	112600646	112620146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619630
ES.10037.35	chr13	+	5790	16	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	1	-19	intron_retention	FALSE	canonical	3	291	junction_15	43.7990360117156	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600646	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.36	chr13	+	7950	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	1	-745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.738338725668	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGCTGCTGTCTTTTC	NA	False	NA	7	True	AATAAA	-7	NA	112600646	112645875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112622274_112622335_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.37	chr13	+	5412	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	1	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	97.2165752328275	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600646	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635261_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.39	chr13	+	3470	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	2	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	95.8251363025634	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTCGTATTCTTTCGT	NA	False	NA	13	True	AATAAA	-14	NA	112600647	112643372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238_112641140_112643055
ES.10037.4	chr13	+	5564	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	3	-13	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	120.181840310774	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTCGTGTGTAAAAA	NA	False	NA	22	True	AATAAA	-23	NA	112600606	112643381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607087_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.40	chr13	+	3025	5	NNC	ENSMUSG00000021756.13	novel	3004	6	NA	NA	6	-1823	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	201.757744584935	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAAACCCAGCGT	NA	False	NA	NA	False	NA	NA	NA	112600651	112614768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112611972_112614555_112614624
ES.10037.41	chr13	+	8508	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	10	-739	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	122.757053229731	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	112600655	112645881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112611988_112612610_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.42	chr13	+	7837	15	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	11	-20	intron_retention	FALSE	canonical	3	291	junction_14	44.9800976396614	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCGTATTCTTTCGTGT	NA	False	NA	15	True	AATAAA	-16	NA	112600656	112643374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.43	chr13	+	5332	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	11	-19	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	98.1131163186146	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600656	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627064_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.44	chr13	+	5317	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	15	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.3644173151552	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600660	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624399_112625092_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.45	chr13	+	3592	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	58	5028	16	513	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCCGAGTCAATTTC	NA	False	NA	NA	False	AAGAAA	-18	NA	112600661	112641592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.46	chr13	+	5515	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	17	-23	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	121.721248283679	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTCGTATTCTTTCG	NA	False	NA	12	True	AATAAA	-13	NA	112600662	112643371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607070_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.47	chr13	+	5561	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	18	-13	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	141.442616777372	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTCGTGTGTAAAAA	NA	False	NA	22	True	AATAAA	-23	NA	112600663	112643381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607087_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112626962_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.49	chr13	+	8429	15	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	18	-18	intron_retention	FALSE	canonical	3	298	junction_12	36.4146331878282	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600663	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112637744_112639324
ES.10037.5	chr13	+	8064	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	-3	-734	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	120.181840310774	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTCTGTCTGCGGTC	NA	False	NA	18	True	AATAAA	-18	NA	112600611	112645886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607087_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.50	chr13	+	6010	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	19	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.911001081479	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600664	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112611972_112612610_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.52	chr13	+	1757	6	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCGTTCCAATATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	112600664	112620147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
ES.10037.54	chr13	+	5472	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	19	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.618170452103	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTCGTGTGTAAAAA	NA	False	NA	22	True	AATAAA	-23	NA	112600664	112643381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112605891_112605985_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631722_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.55	chr13	+	5210	15	NIC	ENSMUSG00000021756.13	novel	2985	16	NA	NA	21	-13	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	99.5390652467868	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTCGTGTGTAAAAA	NA	False	NA	22	True	AATAAA	-23	NA	112600666	112643381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.56	chr13	+	5355	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	21	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5614389756527	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600666	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600770_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.57	chr13	+	1634	5	ISM	ENSMUSG00000021756.13	ENSMUST00000184276.8	3009	18	-105	22075	24	-1146	5prime_fragment	FALSE	canonical	3	401	junction_2	8.38152730712011	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGGGTTGGATTACT	NA	False	NA	NA	False	NA	NA	NA	112600669	112619004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957
ES.10037.58	chr13	+	10319	15	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	24	-751	intron_retention	FALSE	canonical	3	291	junction_14	44.9800976396614	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAAAGAAGCTGCTGT	NA	False	NA	1	True	AATAAA	-1	NA	112600669	112645869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.59	chr13	+	3669	6	NNC	ENSMUSG00000021756.13	novel	2985	16	NA	NA	41	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.845163211237	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTCGTATTCTTTCGT	NA	False	NA	13	True	AATAAA	-14	NA	112600686	112643372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600755_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.6	chr13	+	5288	17	NNC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	-1	-18	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	95.059767383473	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTATTCTTTCGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	112600613	112643376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616689_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.60	chr13	+	7988	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	41	-752	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	121.721248283679	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAGAAAGAAGCTGCTG	NA	False	NA	0	True	CATAAA	-35	NA	112600686	112645868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112607070_112607216_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.61	chr13	+	5293	17	NNC	ENSMUSG00000021756.13	novel	5207	15	NA	NA	-81	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5614389756527	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTATTCTTTCGTGTGTA	NA	False	NA	18	True	AATAAA	-19	NA	112604045	112643377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112604085_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.62	chr13	+	6665	12	ISM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	10693	21	10655	-21	3prime_fragment	FALSE	canonical	3	291	junction_11	36.3713628155153	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCGTATTCTTTCGTG	NA	False	NA	14	True	AATAAA	-15	NA	112622234	112643373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.63	chr13	+	8711	10	NIC	ENSMUSG00000021756.13	novel	5207	15	NA	NA	11069	-19	intron_retention	FALSE	canonical	3	291	junction_9	38.4518297337922	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112622648	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.64	chr13	+	4350	10	NIC	ENSMUSG00000021756.13	novel	5207	15	NA	NA	13531	-12	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	114.902857521763	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCGTGTGTAAAAAT	NA	False	NA	23	True	AATAAA	-24	NA	112625110	112643382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112640238
ES.10037.65	chr13	+	7426	9	ISM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	17841	-2484	17803	-742	3prime_fragment	FALSE	canonical	3	291	junction_8	38.9661311269158	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGCTGTCTTTTCTGT	NA	False	NA	10	True	AATAAA	-10	NA	112629382	112645878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.66	chr13	+	4297	3	ISM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	23740	12	23702	-12	intron_retention	FALSE	canonical	3	312	junction_1	13.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCGTGTGTAAAAAT	NA	False	NA	23	True	AATAAA	-24	NA	112635281	112643382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112635424_112637646_112637744_112639324
ES.10037.67	chr13	+	4692	3	ISM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	24729	19	24691	-19	3prime_fragment	FALSE	canonical	3	291	junction_2	24	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112636270	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112637744_112639324_112639407_112640238
ES.10037.7	chr13	+	5617	18	NNC	ENSMUSG00000021756.13	novel	3009	18	NA	NA	-1	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	141.942505052167	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGTATTCTTTCGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	112600613	112643375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112600785_112602260_112602461_112609120_112609208_112611564_112611644_112616524_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.8	chr13	+	7918	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	21	739	10	-739	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	112600624	112645881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10037.9	chr13	+	5262	16	NIC	ENSMUSG00000021756.13	novel	8678	17	NA	NA	10	-14	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	98.6561706128917	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTTTCGTGTGTAAAA	NA	False	NA	21	True	AATAAA	-22	NA	112600624	112643380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ES.10038.1	chr13	-	178	1	Intergenic	novelGene_8383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAAAGATT	9703	False	NA	NA	False	NA	NA	NA	112592106	112591928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_112591900_112592100
ES.10039.1	chr13	-	173	1	Intergenic	novelGene_8384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATATTTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	112661846	112661673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_112661700_112661800
ES.1004.1	chr1	+	1600	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	472	215	-23	2	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCTCTAGAAATTTCA	NA	False	NA	27	True	AATAAA	-32	NA	90531174	90540848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.10	chr1	+	1485	7	FSM	ENSMUSG00000034432.12	ENSMUST00000186750.2	508	7	-33	-944	-4	0	multi-exon	FALSE	canonical	3	6	junction_1	273.658800130544	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCTCTAGAAATTT	NA	False	NA	25	True	AATAAA	-30	NA	90531216	90540846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.11	chr1	+	1536	8	NNC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-4	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	261.131290772301	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTCATCTAAAGCTG	NA	False	NA	12	True	AATAAA	-17	NA	90531216	90540833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537916_90538696_90538760_90539261_90539310_90539895
ES.1004.12	chr1	+	1663	8	NNC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.130579454525	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCTGACTTTGTAGTGG	NA	False	NA	12	True	ATTAAA	-13	NA	90531217	90541054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_90531278_90532124_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.15	chr1	+	2182	7	ISM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	851	1	304	-1	3prime_fragment	FALSE	canonical	3	708	junction_6	26.7830792354676	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGTGGGTTACCTA	NA	False	NA	20	True	ATTAAA	-21	NA	90531553	90541062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.16	chr1	+	2572	3	ISM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	3096	-216	3044	-1	intron_retention	FALSE	canonical	3	717	junction_2	28.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGTGGGTTACCTA	NA	False	NA	20	True	ATTAAA	-21	NA	90534293	90541062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_90534392_90537814_90537923_90538696
ES.1004.17	chr1	+	4650	1	NIC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-1188	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATCTAAAGCTGGCTC	NA	False	NA	16	True	AATAAA	-21	NA	90536187	90540837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90536200_90540800
ES.1004.2	chr1	+	2610	7	FSM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	-18	1	-18	-1	multi-exon	FALSE	canonical	3	708	junction_6	25.9293913027925	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTGGCTCTAGAAATT	NA	False	NA	24	True	AATAAA	-29	NA	90531179	90540845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90532096_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.3	chr1	+	1797	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	489	1	-6	-1	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGTGGGTTACCTA	NA	False	NA	20	True	ATTAAA	-21	NA	90531191	90541062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.4	chr1	+	3608	6	NIC	ENSMUSG00000034432.12	novel	2593	7	NA	NA	-3	-12	intron_retention	FALSE	canonical	3	708	junction_5	23.6862829502647	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTCATCTAAAGCTGG	NA	False	NA	13	True	AATAAA	-18	NA	90531194	90540834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90531350_90532096_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.5	chr1	+	6016	6	NIC	ENSMUSG00000034432.12	novel	2287	8	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	708	junction_5	16.9988234887006	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATCTAAAGCTGGCTC	NA	False	NA	16	True	AATAAA	-21	NA	90531194	90540837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90531350_90532096_90532168_90533185_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.6	chr1	+	5109	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	497	-3319	0	3319	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATCTTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	90531199	90544382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.7	chr1	+	2805	7	FSM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	3	-215	1	-2	multi-exon	FALSE	canonical	3	708	junction_6	25.9293913027925	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTAGTGGGTTACCT	NA	False	NA	19	True	ATTAAA	-20	NA	90531200	90541061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90531350_90532096_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ES.1004.8	chr1	+	4890	4	NIC	ENSMUSG00000034432.12	novel	2593	7	NA	NA	4	3	intron_retention	FALSE	canonical	3	708	junction_3	27.0102861065105	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTCTAGAAATTTCAT	NA	False	NA	28	True	AATAAA	-33	NA	90531203	90540849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90531350_90532096_90534392_90537814_90539310_90539895
ES.1004.9	chr1	+	3821	5	NIC	ENSMUSG00000034432.12	novel	2593	7	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	708	junction_4	29.7237278954037	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGCTGGCTCTAGAAA	NA	False	NA	22	True	AATAAA	-27	NA	90531215	90540843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90533235_90534258_90534392_90537814_90537923_90538696_90539310_90539895
ES.10040.1	chr13	-	1612	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	-102	-168	-102	168	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATACATAGCATATTTG	NA	False	NA	NA	False	AGTAAA	-24	NA	112731720	112730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_112730100_112731700
ES.10041.1	chr13	-	3025	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.8457652522171	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCAACAGCATTTTTC	NA	False	NA	1	True	AATAAA	-24	NA	112789005	112734866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761372_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10041.2	chr13	-	2922	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	90	0	-84	0	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112788919	112734868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10041.3	chr13	-	2723	19	NIC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	14.7091136609708	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112788858	112734868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10041.4	chr13	-	2913	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_19	12.5835079052629	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112788895	112734868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777777_112781042_112781101_112787865_112787953_112788809
ES.10041.5	chr13	-	2844	22	NNC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	13.7975317389078	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTCCAACAGCATTT	NA	False	NA	-2	True	AATAAA	-21	NA	112788884	112734869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762897_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10041.6	chr13	-	2105	13	NIC	ENSMUSG00000021758.15	novel	2762	21	NA	NA	26915	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.1804152064689	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCCTAAGTTTTCCAAC	788	False	NA	-9	True	AATAAA	-14	NA	112761920	112734876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878
ES.10041.7	chr13	-	2644	19	NIC	ENSMUSG00000021758.15	novel	3012	22	NA	NA	-73	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	14.5317872096371	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGATGAAACACAT	NA	False	NA	-29	True	AATATA	-15	NA	112788908	112734896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10041.8	chr13	-	2534	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	113	365	-61	-365	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTAGTATATTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	112788896	112735233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ES.10042.1	chr13	+	5248	15	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	-72	-3680	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	12.5633090662404	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGTCTACTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	112797212	112871597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797344_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.10	chr13	+	2083	3	NNC	ENSMUSG00000047789.6	novel	2063	3	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCTTCAGTTCTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	112797300	112810222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797407_112806120_112806266_112808390
ES.10042.11	chr13	+	2260	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	1	6649	1	-6643	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTTCCATGGCAT	NA	False	NA	12	True	AGTAAA	-18	NA	112797300	112868634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.12	chr13	+	5174	3	FSM	ENSMUSG00000047789.6	ENSMUST00000223674.2	2063	3	-11	-3100	2	3100	multi-exon	FALSE	canonical	0	0	junction_2	23	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAATTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	112797303	112813319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112808393
ES.10042.13	chr13	+	3225	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	9	5676	-2	-5670	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGGTTTTGTGAATC	NA	False	NA	NA	False	NA	NA	NA	112797308	112869607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.14	chr13	+	4884	14	NIC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	4	-7003	intron_retention	FALSE	canonical	3	26	junction_2	7.50857497963842	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCTGTAATTCTAAGT	NA	False	NA	16	True	CATAAA	-18	NA	112797318	112868274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112865822_112868032
ES.10042.15	chr13	+	2227	15	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	5	-6643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.9640397457973	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTTCCATGGCAT	NA	False	NA	12	True	AGTAAA	-18	NA	112797319	112868634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797407_112806120_112806266_112822613_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.16	chr13	+	1128	3	FSM	ENSMUSG00000047789.6	ENSMUST00000223674.2	2063	3	20	915	20	-915	multi-exon	FALSE	canonical	0	0	junction_2	23	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAATGAAACAACTCTTC	NA	False	NA	NA	False	NA	NA	NA	112797334	112809304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112808393
ES.10042.17	chr13	+	4886	14	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	26	-7005	intron_retention	FALSE	canonical	0	0	junction_5	14.1918386414047	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTGCTGTAATTCTAA	NA	False	NA	14	True	CATAAA	-16	NA	112797340	112868272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826666_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112865822_112868032
ES.10042.18	chr13	+	3861	15	NIC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	27	-7005	intron_retention	FALSE	canonical	1	3	junction_2	12.2582750059888	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTGCTGTAATTCTAA	NA	False	NA	14	True	CATAAA	-16	NA	112797341	112868272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112797407_112806120_112806266_112820595_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.19	chr13	+	3532	1	FSM	ENSMUSG00000047789.6	ENSMUST00000224703.2	1768	1	-1245	-519	-1245	519	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAAAAGAAAAGAAA	2490	False	NA	NA	False	NA	NA	NA	112803659	112807191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112803700_112807200
ES.10042.2	chr13	+	1856	15	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	-5	-7005	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	12.5633090662404	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTGCTGTAATTCTAA	NA	False	NA	14	True	CATAAA	-16	NA	112797279	112868272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797344_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.20	chr13	+	924	2	ISM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	68200	6649	-6644	-6643	3prime_fragment	FALSE	canonical	3	57	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTTCCATGGCAT	NA	False	NA	12	True	AGTAAA	-18	NA	112865499	112868634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112865822_112868032
ES.10042.3	chr13	+	1972	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	-18	6956	-3	-6950	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTCTCATAAGTATTT	NA	False	NA	69	True	NA	NA	NA	112797281	112868327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.4	chr13	+	4220	15	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	-3	-6643	intron_retention	FALSE	canonical	1	3	junction_2	15.6532907148651	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTTCCATGGCAT	NA	False	NA	12	True	AGTAAA	-18	NA	112797281	112868634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797344_112806120_112806266_112820595_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.5	chr13	+	5324	16	NIC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	0	-3680	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.0019443263068	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGTCTACTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	112797284	112871597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112797407_112806120_112806266_112820595_112820681_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.6	chr13	+	5229	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	-5	3686	-5	-3680	multi-exon	FALSE	canonical	3	26	junction_2	7.31122983038101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGTCTACTTTGACTT	NA	False	NA	NA	False	NA	NA	NA	112797294	112871597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.7	chr13	+	2874	3	NNC	ENSMUSG00000047789.6	novel	2063	3	NA	NA	-3	790	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGTCTAGAAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	112797296	112811009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797407_112806120_112806266_112808390
ES.10042.8	chr13	+	3838	14	NIC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	1	-7005	intron_retention	FALSE	canonical	0	0	junction_4	17.1619504829346	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTGCTGTAATTCTAA	NA	False	NA	14	True	CATAAA	-16	NA	112797300	112868272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112797407_112806120_112806266_112820595_112822733_112825806_112825929_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10042.9	chr13	+	2252	16	NNC	ENSMUSG00000047789.6	novel	8910	15	NA	NA	1	-6955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.818508323339	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATGGTCTCTCATAAG	NA	False	NA	64	True	NA	NA	NA	112797300	112868322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850947_112857701_112857841_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ES.10043.1	chr13	-	985	1	Antisense	novelGene_ENSMUSG00000047789.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	4256	False	NA	NA	False	NA	NA	NA	112869872	112868887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_112868900_112869900
ES.10044.1	chr13	+	998	5	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	-1571	125	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	139.925873232937	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGTCCCACCTGTA	8066	False	NA	NA	False	ATTAAA	-20	NA	112935754	113004301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112935912_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.10	chr13	+	3083	4	ISM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-48	5801	23	-5801	5prime_fragment	FALSE	canonical	3	38	junction_1	134.179813020522	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGATAGGTTCCTTATA	9660	False	NA	NA	False	NA	NA	NA	112937348	112998375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177
ES.10044.11	chr13	+	1713	7	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	26	-11	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	133.866123006864	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	9663	False	NA	3	True	AATAAA	-18	NA	112937351	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112937801_112971392_112971548_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.12	chr13	+	8501	4	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	27	-9	intron_retention	FALSE	canonical	3	68	junction_1	132.288405471614	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGAAGCGTTTGTAGT	9664	False	NA	5	True	AATAAA	-20	NA	112937352	113004419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112937801_112993279_112993561_112996177_113003507_113003976
ES.10044.13	chr13	+	1411	6	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	569	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.750755255945	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	408	False	NA	3	True	AATAAA	-18	NA	112937965	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112938265_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.14	chr13	+	2986	1	Intergenic	novelGene_8385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGCCAAGCATGGTGGC	NA	False	NA	NA	False	NA	NA	NA	112973365	112976351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_112973400_112976400
ES.10044.15	chr13	+	205	1	Intergenic	novelGene_8386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATCTGAGCAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	112976556	112976761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_112976600_112976800
ES.10044.16	chr13	+	2453	1	Intergenic	novelGene_8387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACCCTTAGCAAAGTA	1178	False	NA	NA	False	NA	NA	NA	112989142	112991595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_112989100_112991600
ES.10044.2	chr13	+	1265	6	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	-1567	-11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	128.577758574335	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	8070	False	NA	3	True	AATAAA	-18	NA	112935758	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112935912_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.3	chr13	+	1617	7	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	6	125	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	133.866123006864	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGTCCCACCTGTA	9643	False	NA	NA	False	ATTAAA	-20	NA	112937331	113004301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112937801_112971392_112971548_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.4	chr13	+	1580	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	7	11	7	-11	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	9644	False	NA	3	True	AATAAA	-18	NA	112937332	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.5	chr13	+	1416	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	16	-11	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	9653	False	NA	3	True	AATAAA	-18	NA	112937341	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.6	chr13	+	1453	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	18	127	18	125	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTGTCCCACCTGTA	9655	False	NA	NA	False	ATTAAA	-20	NA	112937343	113004301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.7	chr13	+	1377	5	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	18	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.615654408504	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTGGGAAGCGTTTG	9655	False	NA	1	True	AATAAA	-16	NA	112937343	113004415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112937766_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10044.8	chr13	+	5146	5	NNC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	18	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.914088425161	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCCCACCTGTACATT	9655	False	NA	NA	False	ATTAAA	-24	NA	112937343	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_112937801_112993279_112993561_112996177_112998203_113001452_113003507_113003976
ES.10044.9	chr13	+	1566	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	-53	-241	18	-11	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGGAAGCGTTTGTA	9655	False	NA	3	True	AATAAA	-18	NA	112937343	113004417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ES.10045.1	chr13	+	2870	2	Antisense	novelGene_ENSMUSG00000016018.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTACAAC	NA	False	NA	NA	False	NA	NA	NA	113022454	113025444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113023578_113023697
ES.10046.1	chr13	+	168	1	Intergenic	novelGene_8388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAATGGGTAGTAGGA	7295	False	NA	NA	False	NA	NA	NA	113044907	113045075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113044900_113045100
ES.10047.1	chr13	+	3029	1	Antisense	novelGene_ENSMUSG00000016018.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAACCTACTACA	1848	False	NA	NA	False	NA	NA	NA	113050243	113053272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113050200_113053300
ES.10048.1	chr13	+	4692	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	-8	-2	-8	2	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCATCTCTGTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	113063979	113105968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.11	chr13	+	4357	26	NIC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	31	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	63.6720849352367	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTCCATCTCTG	NA	False	NA	15	True	AATAAA	-15	NA	113064212	113105963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113105668
ES.10048.12	chr13	+	4440	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	61.8418124193786	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTCCATCTCTG	NA	False	NA	15	True	AATAAA	-15	NA	113064213	113105963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069180_113069639_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.13	chr13	+	6519	24	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	34	-1	intron_retention	FALSE	canonical	1	1	junction_9	66.1791405122596	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTCCATCTCTGTG	NA	False	NA	17	True	AATAAA	-17	NA	113064215	113105965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081190_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.15	chr13	+	3610	12	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	228	19684	34	8019	5prime_fragment	FALSE	canonical	3	261	junction_10	30.4028054381894	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGTTCTTGAAGAGT	NA	False	NA	NA	False	AATAAA	-12	NA	113064215	113086282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745
ES.10048.18	chr13	+	4325	26	NIC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	64.2396263999099	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064215	113105966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.2	chr13	+	4615	25	NIC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	14	-1	intron_retention	FALSE	canonical	1	1	junction_6	65.2239597889882	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTCCATCTCTGTG	NA	False	NA	17	True	AATAAA	-17	NA	113064001	113105965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.20	chr13	+	4500	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	35	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_25	61.9055995402506	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATATTTTGTCCATCTC	NA	False	NA	13	True	AATAAA	-13	NA	113064216	113105961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101933_113103069_113103167_113105668
ES.10048.21	chr13	+	5786	26	NIC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	35	0	intron_retention	FALSE	canonical	3	222	junction_12	28.732587770683	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064216	113105966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.24	chr13	+	1106	6	ISM	ENSMUSG00000042426.7	ENSMUST00000224176.2	1272	8	232	5907	38	118	5prime_fragment	FALSE	canonical	3	272	junction_5	27.1617377941839	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTACGGGTAAATAGTA	NA	False	NA	NA	False	AATGAA	-14	NA	113064219	113072356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002
ES.10048.26	chr13	+	4214	26	NIC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	64.248094135157	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064230	113105966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.27	chr13	+	4471	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	52	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.980754550791	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATATTTTGTCCATCTC	NA	False	NA	13	True	AATAAA	-13	NA	113064233	113105961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076866_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.28	chr13	+	4517	28	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	61	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.1235911251286	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCATCTCTGTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	113064242	113105968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113064747_113064836_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.3	chr13	+	4542	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	61.9373609898786	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTCCATCTCTG	NA	False	NA	15	True	AATAAA	-15	NA	113064163	113105963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089297_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.30	chr13	+	3974	24	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	5051	2	-17	-2	3prime_fragment	FALSE	canonical	3	222	junction_9	28.0371748898387	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTGTCCATCTCTGT	NA	False	NA	16	True	AATAAA	-16	NA	113069038	113105964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.31	chr13	+	3695	22	NNC	ENSMUSG00000042426.7	novel	1272	8	NA	NA	1814	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.9411637670932	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113070869	113105966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113070994_113072002_113072132_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.32	chr13	+	3753	23	NNC	ENSMUSG00000042426.7	novel	1272	8	NA	NA	1853	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.2161853104448	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTCCATCTCTGTG	NA	False	NA	17	True	AATAAA	-17	NA	113070908	113105965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113070965_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.33	chr13	+	2991	17	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	19306	5	14238	-5	3prime_fragment	FALSE	canonical	3	222	junction_2	26.8071090151475	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATATTTTGTCCATCTC	NA	False	NA	13	True	AATAAA	-13	NA	113083293	113105961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.34	chr13	+	2377	16	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	20757	5	15689	-5	3prime_fragment	FALSE	canonical	3	222	junction_1	26.5500784681828	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATATTTTGTCCATCTC	NA	False	NA	13	True	AATAAA	-13	NA	113084744	113105961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.5	chr13	+	2540	8	ISM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	207	26253	13	1450	5prime_fragment	FALSE	canonical	3	263	junction_6	31.9853282692205	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAACTTCTTTTCTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	113064194	113079713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206
ES.10048.6	chr13	+	1067	3	FSM	ENSMUSG00000042426.7	ENSMUST00000223866.2	1736	3	23	646	23	-646	multi-exon	FALSE	canonical	3	291	junction_2	16	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATAGAAAAATGTGTAC	NA	False	NA	NA	False	ATTAAA	-21	NA	113064204	113068065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113064508_113066160_113066235_113067375
ES.10048.7	chr13	+	4455	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	62.9550064747569	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTCCATCTCTGTG	NA	False	NA	17	True	AATAAA	-17	NA	113064205	113105965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084753_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10048.9	chr13	+	4577	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	63.0476127961237	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCATCTCTGTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	113064208	113105968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097480_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ES.10049.1	chr13	-	3178	1	Antisense	novelGene_ENSMUSG00000021759.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAAAGGGACCGAGATTC	NA	False	NA	NA	False	NA	NA	NA	112971477	112968299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_112968300_112971500
ES.10049.2	chr13	-	721	1	Antisense	novelGene_ENSMUSG00000021759.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	112971477	112970756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_112970800_112971500
ES.1005.1	chr1	-	4648	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	90555458	90550810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_90550800_90555500
ES.1005.2	chr1	-	2168	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGGATCTAGACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	90555434	90553266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_90553300_90555400
ES.10050.1	chr13	-	5108	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	13	-1432	-13	1432	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATAGTGTGCTGACTAG	7249	False	NA	NA	False	AATAAA	-38	NA	113063919	113002519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.10	chr13	-	3303	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-2	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	131.508706711109	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGACAGGCTTCATTTT	7260	False	NA	-20	True	AATAAA	-23	NA	113063908	113004303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009578_113011121_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.13	chr13	-	5010	28	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	7	83	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	201.314289290905	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7243	False	NA	-22	True	AATAAA	-21	NA	113063925	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013071_113017512_113018106_113018307_113019464_113019531_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.15	chr13	-	3461	28	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	5	83	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	167.672356709118	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7241	False	NA	-22	True	AATAAA	-21	NA	113063927	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113005650_113005870_113006002_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.16	chr13	-	5695	28	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-228	83	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	200.182063908239	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7008	False	NA	-22	True	AATAAA	-21	NA	113064160	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113018106_113018307_113019466_113019537_113019823_113023288_113023579_113023698_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.17	chr13	-	5720	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	10	83	intron_retention	FALSE	canonical	1	1	junction_2	130.910585366298	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7272	False	NA	-22	True	AATAAA	-21	NA	113063896	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113008071_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.18	chr13	-	6391	5	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-1404	83	intron_retention	FALSE	canonical	3	630	junction_3	24.4374200765956	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	2555	False	NA	-22	True	AATAAA	-21	NA	113019465	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113009596_113011129_113011187_113012969_113013076_113017512
ES.10050.19	chr13	-	3206	26	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-8	83	combination_of_known_splicesites	FALSE	canonical	1	16	junction_14	132.377544923601	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7254	False	NA	-22	True	AATAAA	-21	NA	113063914	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.2	chr13	-	3961	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	18	-290	-8	290	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAAGGATTACTCAGTT	7254	False	NA	NA	False	NA	NA	NA	113063914	113003661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.20	chr13	-	3211	26	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-25	83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	133.736301728439	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7211	False	NA	-22	True	AATAAA	-21	NA	113063957	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113024006_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.21	chr13	-	3325	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-9	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	132.936458772625	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7253	False	NA	-22	True	AATAAA	-21	NA	113063915	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027805_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.22	chr13	-	3739	8	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	16738	83	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	302.151806689476	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	9277	False	NA	-22	True	AATAAA	-21	NA	113037470	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113018106_113018307_113018942_113035613
ES.10050.24	chr13	-	5377	11	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-14049	83	intron_retention	FALSE	canonical	3	542	junction_9	59.1476119551753	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	NA	False	NA	-22	True	AATAAA	-21	NA	113032110	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006
ES.10050.25	chr13	-	3271	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	4	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	132.286117426982	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7266	False	NA	-22	True	AATAAA	-21	NA	113063902	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049691_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.26	chr13	-	3291	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	11	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	132.953238431666	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7273	False	NA	-22	True	AATAAA	-21	NA	113063895	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054129_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.27	chr13	-	5524	28	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	11	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	169.156448230779	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7247	False	NA	-22	True	AATAAA	-21	NA	113063921	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113005870_113008071_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.28	chr13	-	3207	26	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-11	83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	134.396130896689	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7251	False	NA	-22	True	AATAAA	-21	NA	113063917	113004305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.30	chr13	-	3285	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	11	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	132.980784526391	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTGACAGGCTTCAT	7273	False	NA	-23	True	AATAAA	-20	NA	113063895	113004306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046361_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.33	chr13	-	3479	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-234	81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.477898788437	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	7002	False	NA	-24	True	AATAAA	-19	NA	113064166	113004307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023362_113024018_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.34	chr13	-	5113	28	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-102	81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	201.314289290905	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	7134	False	NA	-24	True	AATAAA	-19	NA	113064034	113004307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013071_113017512_113018106_113018307_113019466_113019537_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.35	chr13	-	3930	8	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-6763	81	intron_retention	FALSE	canonical	3	544	junction_6	52.6055789700628	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	NA	False	NA	-24	True	AATAAA	-19	NA	113024824	113004307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113019823_113023288_113023400_113023968
ES.10050.36	chr13	-	3273	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-8	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	132.980784526391	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	7254	False	NA	-24	True	AATAAA	-19	NA	113063914	113004307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047527_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.38	chr13	-	3271	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-6886	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	133.012417670073	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGACAGGCTTCA	8376	False	NA	-24	True	AATAAA	-19	NA	113070818	113004307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113070711
ES.10050.43	chr13	-	6238	26	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-4	77	intron_retention	FALSE	non_canonical	0	0	junction_14	135.173961989726	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTTTTAGTGACAGGC	7258	False	NA	-28	True	AATAAA	-15	NA	113063910	113004311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038167_113038535_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.44	chr13	-	2652	22	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	6	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.772350709222	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTTTAGTGACAGG	7242	False	NA	-29	True	AATAAA	-14	NA	113063926	113004312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046385_113056932_113056961_113058163_113058302_113063763
ES.10050.45	chr13	-	2959	25	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	6	76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	135.48907679424	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTTTAGTGACAGG	7268	False	NA	-29	True	AATAAA	-14	NA	113063900	113004312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032085_113039968_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.46	chr13	-	5546	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	9	76	intron_retention	FALSE	non_canonical	0	0	junction_6	174.341330178142	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTTTAGTGACAGG	7245	False	NA	-29	True	AATAAA	-14	NA	113063923	113004312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113018106_113018307_113019464_113019531_113019823_113023288_113023400_113023968_113024098_113027812_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.47	chr13	-	3289	27	NNC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	7	76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	173.570373497936	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTTTAGTGACAGG	7243	False	NA	-29	True	AATAAA	-14	NA	113063925	113004312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023978_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051039_113054118_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.48	chr13	-	3103	25	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	13	5371	-13	-201	5prime_fragment	FALSE	canonical	3	524	junction_19	58.7018715393489	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTGCTGCTCAAAG	7249	False	NA	NA	False	NA	NA	NA	113063919	113009322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.49	chr13	-	1107	8	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	31905	8873	-13966	-1700	internal_fragment	FALSE	canonical	3	542	junction_6	61.7156084514332	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTATTGTGCTTAACA	NA	False	NA	NA	False	AATAAA	-12	NA	113032027	113012824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006
ES.10050.50	chr13	-	6284	22	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	46	9911	20	-2738	5prime_fragment	FALSE	canonical	3	524	junction_16	59.0887721415607	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAAACTGTTACTTGGT	7282	False	NA	NA	False	NA	NA	NA	113063886	113013862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.51	chr13	-	3527	21	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	2	14669	2	-7496	5prime_fragment	FALSE	canonical	3	524	junction_15	58.4739258131349	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTAATATTGTGTC	7238	False	NA	NA	False	ATTAAA	-18	NA	113063930	113018620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.52	chr13	-	4684	16	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	18	25198	-8	-18025	5prime_fragment	FALSE	canonical	3	524	junction_10	56.7108063384357	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTTATGTTTTTGTA	7254	False	NA	NA	False	AATAAA	-11	NA	113063914	113029149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.53	chr13	-	2130	16	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	23	27747	-3	17217	5prime_fragment	FALSE	canonical	3	524	junction_10	56.7108063384357	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGATGTCTCACAAGA	7259	False	NA	NA	False	TATAAA	-11	NA	113063909	113031698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.54	chr13	-	1682	12	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	23	37218	-3	7746	5prime_fragment	FALSE	canonical	3	524	junction_6	51.3403808979228	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATATTTTTCCTTTCAC	7259	False	NA	NA	False	AATAAA	-22	NA	113063909	113041169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.55	chr13	-	3278	1	Intergenic	novelGene_8389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCTGTGTGGTGTAC	8991	False	NA	NA	False	NA	NA	NA	113062177	113058899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113058900_113062200
ES.10050.6	chr13	-	3850	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	0	-161	0	161	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGCAAATAGCTTCA	7236	False	NA	NA	False	AAGAAA	-27	NA	113063932	113003790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.7	chr13	-	3573	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	-228	344	-228	93	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCATTTTCTTTAATT	7008	False	NA	-12	True	AATAAA	-31	NA	113064160	113004295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10050.9	chr13	-	3246	26	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	-5	88	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	134.718349158531	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACAGGCTTCATTTTCTT	7231	False	NA	-17	True	AATAAA	-26	NA	113063937	113004300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ES.10051.1	chr13	-	1464	1	Intergenic	novelGene_8390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGATGCTGTTGTGCTT	9122	False	NA	NA	False	NA	NA	NA	113089224	113087760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113087800_113089200
ES.10052.1	chr13	+	176	1	Intergenic	novelGene_8391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	113121458	113121634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113121500_113121600
ES.10053.1	chr13	-	156	1	Intergenic	novelGene_8392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	113121815	113121659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113121700_113121800
ES.10054.1	chr13	+	234	1	Intergenic	novelGene_8393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATATGACTAGTAAAGG	NA	False	NA	NA	False	NA	NA	NA	113132005	113132239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113132000_113132200
ES.10055.1	chr13	-	763	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	-4	10	-4	-4	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAGTGCATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	113182931	113179296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113179834_113182705
ES.10055.2	chr13	-	911	3	NNC	ENSMUSG00000021760.6	novel	1042	3	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAGTGCATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	113182920	113179296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113179834_113182068_113182228_113182705
ES.10055.3	chr13	-	1036	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	-1	7	-1	-7	multi-exon	FALSE	canonical	3	23	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAATATAAAGTGCATT	NA	False	NA	NA	False	AATAAA	-16	NA	113182945	113179299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113179834_113181965_113182228_113182705
ES.10056.1	chr13	-	169	1	Intergenic	novelGene_8394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGGGAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	113185209	113185040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113185000_113185200
ES.10057.1	chr13	+	5785	8	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4595	-17991	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.3371342165866	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTCATCCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	113425097	113489055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130
ES.10057.10	chr13	+	8068	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	11	195	11	-192	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTCTACTTGAAC	NA	False	NA	15	True	AATAAA	-23	NA	113429703	113506854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.11	chr13	+	7952	11	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	11	-201	intron_retention	FALSE	non_canonical	0	0	junction_3	16.4805946494658	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTGAATTGTC	NA	False	NA	6	True	AATAAA	-14	NA	113429703	113506845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113455306_113455413_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483043_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.12	chr13	+	4544	4	ISM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	12	47120	12	-47117	5prime_fragment	FALSE	canonical	3	41	junction_1	2.35702260395516	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCATGACTTCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	113429704	113459929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268
ES.10057.13	chr13	+	5465	4	ISM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	15	46196	15	-46193	5prime_fragment	FALSE	canonical	3	41	junction_1	2.35702260395516	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAAGTCATGGGATT	NA	False	NA	NA	False	NA	NA	NA	113429707	113460853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268
ES.10057.14	chr13	+	5136	4	ISM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	29	46511	29	-46508	5prime_fragment	FALSE	canonical	3	41	junction_1	2.35702260395516	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAGACTCTCTGGGTTG	NA	False	NA	NA	False	NA	NA	NA	113429721	113460538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268
ES.10057.15	chr13	+	7927	10	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	30	-198	intron_retention	FALSE	canonical	0	0	junction_9	13.2086765348565	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGAATTGTCTAC	NA	False	NA	9	True	AATAAA	-17	NA	113429722	113506848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504119
ES.10057.16	chr13	+	6058	9	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	32	-16918	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	13.5462171841441	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTGCTGCCCCTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	113429724	113490128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113489082
ES.10057.17	chr13	+	4959	6	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	37	-37477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.7020956768904	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	113429729	113469569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113469116
ES.10057.19	chr13	+	8143	10	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	59	0	intron_retention	FALSE	canonical	0	0	junction_5	12.8908044553539	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTCTGTCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	113429751	113507049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478975_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.2	chr13	+	8028	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4564	-198	intron_retention	FALSE	canonical	3	10	junction_1	10.3923048454133	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGAATTGTCTAC	NA	False	NA	9	True	AATAAA	-17	NA	113425128	113506848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.20	chr13	+	4603	10	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	69	-201	intron_retention	FALSE	canonical	0	0	junction_3	12.7888840621673	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTGAATTGTC	NA	False	NA	6	True	AATAAA	-14	NA	113429761	113506845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113454356_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.21	chr13	+	10488	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	80	-2294	80	2294	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTATTCATTCTTTG	NA	False	NA	14	True	ATTAAA	-26	NA	113429772	113509343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.22	chr13	+	5510	8	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	90	-19685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.7634407803015	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTACATTGCAATCT	NA	False	NA	NA	False	AATAAA	-27	NA	113429782	113487361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113486635
ES.10057.23	chr13	+	7945	9	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	23954	-5	intron_retention	FALSE	canonical	0	0	junction_8	13.8603526289918	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTACACATGGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	113453646	113507041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504119
ES.10057.24	chr13	+	9440	8	NNC	ENSMUSG00000021763.18	novel	8274	10	NA	NA	-24131	2286	intron_retention	FALSE	canonical	0	0	junction_2	18.749693875052	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAAATGCTTTCTATTC	NA	False	NA	6	True	ATTAAA	-18	NA	113454950	113509335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113457754_113459268_113459740_113464047_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504092
ES.10057.25	chr13	+	6149	3	ISM	ENSMUSG00000021763.18	ENSMUST00000078163.14	3546	6	6099	198	-2956	-198	intron_retention	FALSE	canonical	3	29	junction_2	6	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGAATTGTCTAC	NA	False	NA	9	True	AATAAA	-17	NA	113485180	113506848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_113488301_113502617_113502802_113504003
ES.10057.26	chr13	+	2879	2	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	18275	2288	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATGCTTTCTATTCAT	NA	False	NA	8	True	ATTAAA	-20	NA	113506411	113509337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113508559_113508605
ES.10057.3	chr13	+	5822	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4556	8189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.2274930047555	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTGATCATAGTGTT	NA	False	NA	NA	False	NA	NA	NA	113425136	113524434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113523787
ES.10057.4	chr13	+	8215	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4551	-1	intron_retention	FALSE	canonical	3	10	junction_1	10.3923048454133	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCTCTGTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	113425141	113507048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.5	chr13	+	8199	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4549	-202	intron_retention	FALSE	canonical	0	0	junction_3	14.4204929625846	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGTATTTGAATTGT	NA	False	NA	5	True	AATAAA	-13	NA	113425143	113506844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459078_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.6	chr13	+	5097	6	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4541	-27521	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	13.2755414202209	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	113425151	113479525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903
ES.10057.7	chr13	+	331	2	Intergenic	novelGene_8395	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAAACCCTGA	NA	False	NA	NA	False	CATAAA	-16	NA	113425153	113426125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113425260_113425900
ES.10057.8	chr13	+	7925	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4536	-201	intron_retention	FALSE	canonical	0	0	junction_5	14.5373083249043	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTGAATTGTC	NA	False	NA	6	True	AATAAA	-14	NA	113425156	113506845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478975_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10057.9	chr13	+	8425	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	-151	0	-151	0	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTCTGTCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	113429541	113507049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ES.10058.1	chr13	-	972	1	Intergenic	novelGene_8396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	113441895	113440923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113440900_113441900
ES.10059.1	chr13	+	179	1	Intergenic	novelGene_8397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATAGGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	113658895	113659074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113658900_113659100
ES.1006.2	chr1	-	10108	46	NNC	ENSMUSG00000048126.17	novel	9001	41	NA	NA	-14238	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.17924436990414	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGAGTTTTGGTGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	90785931	90694589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_90695328_90696045_90696211_90700673_90700773_90701158_90701423_90703252_90704008_90705162_90705266_90706477_90707177_90707709_90707807_90709356_90709851_90710053_90710100_90710180_90710214_90711947_90712011_90712928_90712992_90713443_90713480_90713611_90713663_90714359_90714423_90715644_90715708_90715936_90716000_90716752_90716816_90717265_90717302_90719645_90719700_90720131_90720198_90720735_90720799_90721731_90721786_90721897_90721943_90722045_90722073_90722733_90722806_90723636_90723691_90724201_90724295_90725773_90725920_90727717_90727797_90728931_90729270_90729813_90730414_90731360_90731976_90735192_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90757864_90757981_90771467_90771692_90771864_90771966_90775541_90775716_90784423_90784512_90784971_90785037_90785858
ES.10060.1	chr13	+	3547	1	Antisense	novelGene_ENSMUSG00000114715.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTTTAAGTGAGTT	1466	False	NA	NA	False	NA	NA	NA	113662305	113665852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113662300_113665900
ES.10061.1	chr13	+	177	1	Intergenic	novelGene_8398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTAAAGAAAGATTTTAA	8547	False	NA	NA	False	NA	NA	NA	113669386	113669563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113669400_113669600
ES.10062.1	chr13	+	8112	1	Antisense	novelGene_ENSMUSG00000042364.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGCGTTTTCTTTATC	2647	False	NA	NA	False	AATAAA	-15	NA	113721217	113729329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113721200_113729300
ES.10062.2	chr13	+	918	1	Antisense	novelGene_ENSMUSG00000042364.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAACCACCATCAAAACAA	4470	False	NA	NA	False	ATTAAA	-13	NA	113728266	113729184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113728300_113729200
ES.10063.1	chr13	+	5408	1	Intergenic	novelGene_8401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCGTCTAGATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	113854999	113860407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855000_113860400
ES.10063.10	chr13	+	2870	1	Intergenic	novelGene_8409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1536	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGCTATTTAGTGCATT	NA	False	NA	NA	False	NA	NA	NA	113855140	113858010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113858000
ES.10063.11	chr13	+	5196	2	Intergenic	novelGene_8415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	113855140	113860377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855914_113855954
ES.10063.12	chr13	+	4561	2	Intergenic	novelGene_8414	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	131	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	113855140	113860376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113859492_113860166
ES.10063.13	chr13	+	3169	1	Intergenic	novelGene_8410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACTTGTCATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	113855140	113858309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113858300
ES.10063.14	chr13	+	3928	3	Intergenic	novelGene_8413	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	62.5	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAACTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	113855140	113860374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113858712_113859342_113859492_113860166
ES.10063.15	chr13	+	2532	1	Intergenic	novelGene_8408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGTATATTAATACT	NA	False	NA	NA	False	NA	NA	NA	113855140	113857672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113857700
ES.10063.16	chr13	+	1917	1	Intergenic	novelGene_8416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1490	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGATTTTTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	113855141	113857058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113857100
ES.10063.17	chr13	+	661	4	Intergenic	novelGene_8417	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855142	113860378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855377_113858642_113858712_113858798_113858945_113860166
ES.10063.18	chr13	+	2419	2	Intergenic	novelGene_8418	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	113855147	113860376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855377_113858186
ES.10063.19	chr13	+	533	3	Intergenic	novelGene_8420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	26.5	1647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855204	113860378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855377_113859342_113859492_113860166
ES.10063.2	chr13	+	3791	1	Intergenic	novelGene_8403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTGCTTTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	113855098	113858889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113858900
ES.10063.20	chr13	+	325	3	Intergenic	novelGene_8421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	14.5	1647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855326	113860378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855377_113858648_113858712_113860166
ES.10063.21	chr13	+	3637	2	Intergenic	novelGene_8422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	1646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855519	113860378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113858945_113860166
ES.10063.22	chr13	+	2161	2	Intergenic	novelGene_8423	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTCTGATCATTCTTG	1478	False	NA	15	True	AATAAA	-26	NA	113872157	113876389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113873083_113875153
ES.10063.23	chr13	+	1664	2	Intergenic	novelGene_8424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTTTGTAACTTAGT	1707	False	NA	2	True	AATAAA	-13	NA	113872386	113876376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113872828_113875153
ES.10063.24	chr13	+	1725	3	Intergenic	novelGene_8425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTTGTAACTTAGTC	1781	False	NA	3	True	AATAAA	-14	NA	113872460	113876377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113872828_113872948_113873083_113875153
ES.10063.25	chr13	+	4146	2	Intergenic	novelGene_8426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATTTTAAAGATAATTG	2093	False	NA	NA	False	TTTAAA	-4	NA	113872772	113878989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113873083_113875153
ES.10063.3	chr13	+	613	2	Intergenic	novelGene_8404	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	113855114	113860378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855677_113860327
ES.10063.4	chr13	+	2231	1	Intergenic	novelGene_8405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTCAGAGACAATAT	NA	False	NA	NA	False	NA	NA	NA	113855129	113857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113857400
ES.10063.5	chr13	+	3796	2	Intergenic	novelGene_8406	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	113855129	113860380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113858712_113860166
ES.10063.6	chr13	+	3935	3	Intergenic	novelGene_8407	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	1.5	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	113855139	113860383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113858712_113858798_113858945_113860166
ES.10063.7	chr13	+	4632	2	Intergenic	novelGene_8412	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAGAGTAACTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	113855140	113860371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113859218_113859816
ES.10063.8	chr13	+	4371	1	Intergenic	novelGene_8411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1619	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAAATATTCTCC	NA	False	NA	NA	False	NA	NA	NA	113855140	113859511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113855100_113859500
ES.10063.9	chr13	+	5203	2	Antisense	novelGene_ENSMUSG00000114962.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTGCCAAAATAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	113855140	113899574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_113860320_113899550
ES.10064.1	chr13	-	5197	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-36	-714	-36	714	multi-exon	FALSE	canonical	3	496	junction_1	0	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTAGGGTGATGTGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	113755136	113728000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113731399_113753337
ES.10064.10	chr13	-	2996	3	NNC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113755144	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113729767_113731255_113731399_113753337
ES.10064.11	chr13	-	4181	2	NNC	ENSMUSG00000042364.12	novel	3269	2	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113755093	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113753590
ES.10064.12	chr13	-	4000	3	NNC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113755067	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113730265_113730672_113731399_113753337
ES.10064.13	chr13	-	2923	3	NNC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	-117932	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCATCGCTTGTCTTT	8053	False	NA	-8	True	AATAAA	-13	NA	113873032	113728722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113828487_113828644_113872941
ES.10064.15	chr13	-	5615	2	ISM	ENSMUSG00000042364.12	ENSMUST00000224883.2	549	4	-1786	-2563	-1786	-4	intron_retention	FALSE	canonical	0	0	junction_1	0	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCATCGCTTGTCT	NA	False	NA	-10	True	AATAAA	-11	NA	113752336	113728724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_113731399_113749395
ES.10064.16	chr13	-	4065	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-36	418	-36	-412	multi-exon	FALSE	canonical	3	496	junction_1	0	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCACCTGAGGTGTCT	NA	False	NA	NA	False	AATAAA	-32	NA	113755136	113729132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113731399_113753337
ES.10064.17	chr13	-	3204	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	10	1233	10	-1227	multi-exon	FALSE	canonical	3	496	junction_1	0	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATATCGC	NA	False	NA	NA	False	GATAAA	-25	NA	113755090	113729947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113731399_113753337
ES.10064.18	chr13	-	2310	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-14	2151	-14	422	multi-exon	FALSE	canonical	3	496	junction_1	0	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGGGTATATTAGT	NA	False	NA	NA	False	NA	NA	NA	113755114	113730865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113731399_113753337
ES.10064.19	chr13	-	4045	1	NIC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	10	-19758	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTGGCTCTCCAGTA	NA	False	NA	NA	False	NA	NA	NA	113755090	113751045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_113751000_113755100
ES.10064.2	chr13	-	9317	1	Genic_Genomic	ENSMUSG00000042364.12	novel	NA	NA	NA	NA	12849	703	mono-exon	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTCGGCTTCAGTAGG	NA	False	NA	NA	False	AATAAA	-12	NA	113737328	113728011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_113728000_113737300
ES.10064.20	chr13	-	1253	3	Intergenic	novelGene_8399	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCATTTTGTTGTTG	8361	False	NA	NA	False	AATATA	-15	NA	113872724	113827767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113828644_113853427_113853581_113872500
ES.10064.21	chr13	-	1067	2	Intergenic	novelGene_8400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTATAGAAAAAATATA	8360	False	NA	NA	False	AATAAA	-22	NA	113872725	113827801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113828644_113872500
ES.10064.22	chr13	-	2943	1	Intergenic	novelGene_8402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGTGCACGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	113858005	113855062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113855100_113858000
ES.10064.23	chr13	-	2835	1	Intergenic	novelGene_8419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCCAAGACAGTTACTC	NA	False	NA	NA	False	NA	NA	NA	113858006	113855171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113855200_113858000
ES.10064.3	chr13	-	4592	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	-145	0	-145	0	multi-exon	FALSE	canonical	3	496	junction_1	0	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGTCTTTTATTTCTA	NA	False	NA	0	True	AATAAA	-21	NA	113755245	113728714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_113731399_113753337
ES.10064.5	chr13	-	3271	3	NNC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	929	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCGCTTGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	113754171	113728718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113730264_113730506_113731399_113753337
ES.10064.6	chr13	-	4008	3	NNC	ENSMUSG00000042364.12	novel	4447	2	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCGCTTGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	113755065	113728718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113753337_113753486_113753885
ES.10064.7	chr13	-	2876	2	NNC	ENSMUSG00000042364.12	novel	3269	2	NA	NA	6089	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113744088	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113743890
ES.10064.8	chr13	-	2954	2	NNC	ENSMUSG00000042364.12	novel	3269	2	NA	NA	7306	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113742871	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113742595
ES.10064.9	chr13	-	2759	2	NNC	ENSMUSG00000042364.12	novel	3269	2	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113755111	113728720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_113731399_113755030
ES.10065.1	chr13	+	2425	1	Intergenic	novelGene_8427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	113901643	113904068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113901600_113904100
ES.10065.2	chr13	+	711	2	Intergenic	novelGene_8428	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTTAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	113903104	113904231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113903781_113904196
ES.10066.1	chr13	-	177	1	Intergenic	novelGene_8429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGCAAGCT	NA	False	NA	NA	False	NA	NA	NA	113926698	113926521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113926500_113926700
ES.10067.1	chr13	+	3607	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	-243	0	-243	0	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCTGACTGACTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	113930797	114293997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.10	chr13	+	2636	6	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	21	673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.6550812331	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTGCTCTCCCTGCAA	NA	False	NA	NA	False	AATAAA	-24	NA	113931061	114293209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114056027_114056109_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.11	chr13	+	2494	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	21	849	21	612	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCCCTCCCGTGCTC	NA	False	NA	NA	False	NA	NA	NA	113931061	114293148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.12	chr13	+	2446	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	21	669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	179.350138617795	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGCTTTGCTCTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	113931061	114293205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040_114292962_114293002
ES.10067.14	chr13	+	3487	6	FSM	ENSMUSG00000042348.11	ENSMUST00000224858.2	1966	6	-65	-1456	23	-5	multi-exon	FALSE	canonical	3	25	junction_1	177.959995504608	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCGTTTCCTGACTGAC	NA	False	NA	12	True	AATAAA	-12	NA	113931063	114293992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113931233_114037538_114037690_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.15	chr13	+	1973	6	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	24	3	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_4	173.431946307478	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCACTTAATTTAA	NA	False	NA	NA	False	NA	NA	NA	113931064	114292539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114172539_114172631_114291239
ES.10067.17	chr13	+	3332	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.469363482615	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTTTCCTGACTGACT	NA	False	NA	13	True	AATAAA	-13	NA	113931071	114293993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114021074_114021142_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040
ES.10067.18	chr13	+	2474	6	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	34	669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	152.769892321753	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGCTTTGCTCTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	113931074	114293205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040
ES.10067.19	chr13	+	3382	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	-28	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	186.027477062455	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACAGGCGTTTCCTGAC	NA	False	NA	8	True	AATAAA	-8	NA	113931100	114293988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114037538_114037690_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040
ES.10067.2	chr13	+	3501	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	-240	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	179.350138617795	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTTTCCTGACTGACT	NA	False	NA	13	True	AATAAA	-13	NA	113930800	114293993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291993_114292053_114292984_114293021
ES.10067.21	chr13	+	262	1	Intergenic	novelGene_8436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATAGCCCTAATACAT	NA	False	NA	NA	False	NA	NA	NA	113935414	113935676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113935400_113935700
ES.10067.22	chr13	+	3254	7	NNC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	20692	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.202966738897	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACAGGCGTTTCCTGAC	NA	False	NA	8	True	AATAAA	-8	NA	113951849	114293988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113951924_114058782_114058928_114070599_114070660_114076929_114077011_114104117_114104327_114291239_114291977_114292040
ES.10067.23	chr13	+	5136	1	Intergenic	novelGene_8437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGTAAAATA	6656	False	NA	NA	False	ATTAAA	-42	NA	113988144	113993280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_113988100_113993300
ES.10067.24	chr13	+	3159	1	Intergenic	novelGene_8439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCCCAAAGAACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	114009538	114012697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114009500_114012700
ES.10067.25	chr13	+	3681	1	Intergenic	novelGene_8440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTATTTGTAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	114077600	114081281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114077600_114081300
ES.10067.26	chr13	+	2434	1	Intergenic	novelGene_8442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTAAGAGCTGTGCCAA	7757	False	NA	NA	False	NA	NA	NA	114121323	114123757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114121300_114123800
ES.10067.27	chr13	+	205	1	Intergenic	novelGene_8444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGATATTTATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	114135900	114136105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114135900_114136100
ES.10067.28	chr13	+	6172	1	Intergenic	novelGene_8445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTTGCTCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	114156468	114162640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114156500_114162600
ES.10067.29	chr13	+	2470	3	Intergenic	novelGene_8448	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAGAAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	114208675	114211570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114208952_114209150_114210168_114210393
ES.10067.3	chr13	+	3394	6	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	152.769892321753	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGACTGACTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	113930948	114293999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040
ES.10067.30	chr13	+	4319	1	Intergenic	novelGene_8451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCTGAATTCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	114227210	114231529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114227200_114231500
ES.10067.31	chr13	+	781	1	Intergenic	novelGene_8452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGTCTCATTTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	114234864	114235645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114234900_114235600
ES.10067.32	chr13	+	1391	1	Intergenic	novelGene_8454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	114275747	114277138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114275700_114277100
ES.10067.4	chr13	+	2653	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	-26	737	-26	724	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGTGGCCGAACGCTC	NA	False	NA	NA	False	ATTAAA	-22	NA	113931014	114293260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.5	chr13	+	3228	5	NNC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	188.06182494063	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCTGACTGACTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	113931052	114293997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114104117_114104327_114291239_114291977_114292040
ES.10067.6	chr13	+	3225	5	NNC	ENSMUSG00000042348.11	novel	3364	5	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	188.06182494063	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCGTTTCCTGACTGAC	NA	False	NA	12	True	AATAAA	-12	NA	113931053	114293992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114104117_114104327_114291239_114291993_114292053
ES.10067.7	chr13	+	3456	6	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	187.245934535306	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGCGTTTCCTGACTG	NA	False	NA	10	True	AATAAA	-10	NA	113931053	114293990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_113944138_113944251_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ES.10067.8	chr13	+	3357	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	189.011169570008	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTTTCCTGACTGACT	NA	False	NA	13	True	AATAAA	-13	NA	113931060	114293993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114076929_114077011_114104117_114104327_114291239_114291977_114292040
ES.10067.9	chr13	+	3236	7	NNC	ENSMUSG00000042348.11	novel	1966	6	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	179.350138617795	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTTCCTGACTGACTTT	NA	False	NA	15	True	AATAAA	-15	NA	113931060	114293995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239_114291977_114292040_114292963_114293004
ES.10068.1	chr13	-	2550	6	Intergenic	novelGene_8430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAAGATCGCCGAGAGCA	NA	False	NA	NA	False	AAAAAG	-9	NA	114293157	113931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_114058779_114058926_114070597_114070658_114086037_114086107_114104115_114104325_114291237
ES.10068.10	chr13	-	283	1	Intergenic	novelGene_8446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	114191356	114191073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114191100_114191400
ES.10068.11	chr13	-	795	1	Intergenic	novelGene_8447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGGTCTTGACTTCAA	NA	False	NA	NA	False	NA	NA	NA	114208075	114207280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114207300_114208100
ES.10068.12	chr13	-	176	1	Intergenic	novelGene_8449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTATAGTA	NA	False	NA	NA	False	NA	NA	NA	114209152	114208976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114209000_114209200
ES.10068.13	chr13	-	5511	2	Antisense	novelGene_ENSMUSG00000042348.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTACAAAGCCCTTGAAA	NA	False	NA	NA	False	GATAAA	-44	NA	114220729	114215093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_114218808_114218932
ES.10068.14	chr13	-	5625	1	Intergenic	novelGene_8450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAACCTGTACAA	NA	False	NA	NA	False	GATAAA	-33	NA	114220729	114215104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114215100_114220700
ES.10068.15	chr13	-	1279	1	Intergenic	novelGene_8453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACGAAATTCCAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	114248965	114247686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114247700_114249000
ES.10068.16	chr13	-	4395	1	FSM	ENSMUSG00000114696.2	ENSMUST00000223997.2	1976	1	-355	-2064	-355	2064	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCCCATGTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	114257307	114252912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114252900_114257300
ES.10068.17	chr13	-	1313	1	Antisense	novelGene_ENSMUSG00000042348.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACCCCTAAGAGATC	NA	False	NA	NA	False	NA	NA	NA	114293157	114291844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_114291800_114293200
ES.10068.2	chr13	-	2433	5	Intergenic	novelGene_8434	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGCGTCTCGGGCTGC	NA	False	NA	NA	False	NA	NA	NA	114293159	113931133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_114058779_114058926_114070597_114070658_114104115_114104325_114291237
ES.10068.3	chr13	-	2582	6	Intergenic	novelGene_8431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGCGTCTCGGGCTGC	NA	False	NA	NA	False	NA	NA	NA	114293157	113931133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_114037535_114037690_114058782_114058926_114070597_114070658_114104115_114104325_114291237
ES.10068.4	chr13	-	2542	6	Intergenic	novelGene_8432	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGCGTCTCGGGCTGC	NA	False	NA	NA	False	NA	NA	NA	114293157	113931133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_113944136_113944248_114058779_114058926_114070597_114070658_114104115_114104325_114291237
ES.10068.5	chr13	-	2522	6	Intergenic	novelGene_8433	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGCGTCTCGGGCTGC	NA	False	NA	NA	False	NA	NA	NA	114293157	113931133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_114058779_114058926_114070597_114070658_114104115_114104322_114172534_114172629_114291237
ES.10068.6	chr13	-	2682	7	Intergenic	novelGene_8435	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	114293157	113931146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_113931230_113944136_113944258_114037543_114037690_114058782_114058926_114070597_114070658_114104115_114104325_114291237
ES.10068.7	chr13	-	4299	1	Intergenic	novelGene_8438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCTTAGCTGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	114008103	114003804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114003800_114008100
ES.10068.8	chr13	-	9715	1	Intergenic	novelGene_8441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCGTGGGGTCAGCCA	NA	False	NA	NA	False	AATAAA	-41	NA	114127702	114117987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114118000_114127700
ES.10068.9	chr13	-	7036	1	Intergenic	novelGene_8443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTCACAAAAAGTCACTC	NA	False	NA	NA	False	NA	NA	NA	114133298	114126262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114126300_114133300
ES.10069.1	chr13	+	2906	1	Intergenic	novelGene_8455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATACTGTTTAAACACT	NA	False	NA	NA	False	AATAAA	-30	NA	114296172	114299078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114296200_114299100
ES.1007.1	chr1	+	96	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATGGTGTGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	90792399	90792495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_90792400_90792500
ES.10070.1	chr13	+	3225	2	Intergenic	novelGene_8456	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	118	False	NA	NA	False	CATAAA	-28	NA	114335192	114343749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114335276_114340607
ES.10071.1	chr13	-	985	1	Intergenic	novelGene_8457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTACGGATTCTCTTATA	NA	False	NA	NA	False	NA	NA	NA	114346472	114345487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114345500_114346500
ES.10072.1	chr13	-	158	1	Intergenic	novelGene_8458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	6924	False	NA	NA	False	NA	NA	NA	114381149	114380991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114381000_114381100
ES.10073.1	chr13	-	6157	1	Intergenic	novelGene_8459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	114417733	114411576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114411600_114417700
ES.10074.1	chr13	+	933	1	Intergenic	novelGene_8460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGAACTTTATATAGA	NA	False	NA	NA	False	NA	NA	NA	114472755	114473688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_114472800_114473700
ES.10075.1	chr13	-	1439	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-24	-699	6	-1	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGCTGTTATGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	114524610	114424331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
ES.10075.10	chr13	-	914	6	NNC	ENSMUSG00000021764.9	novel	686	6	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	782.00373400643	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGTACACTTGGCAGTT	NA	False	NA	-22	True	AATAAA	-15	NA	114524609	114425187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_114425403_114441257_114441516_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ES.10075.11	chr13	-	5228	3	ISM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-24	23502	6	-23349	5prime_fragment	FALSE	canonical	3	1521	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTCATTACAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	114524610	114448532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_114453566_114487983_114488063_114524494
ES.10075.12	chr13	-	1006	1	NIC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	-1	-26308	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTCTGGCACACTGG	NA	False	NA	NA	False	NA	NA	NA	114524617	114523611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_114523600_114524600
ES.10075.2	chr13	-	1511	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	9	0	-9	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTTAGTGTTGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	114524616	114424339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ES.10075.3	chr13	-	684	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	164	850	-14	3	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGGCAGTTTCTATTT	NA	False	NA	-15	True	AATAAA	-22	NA	114524630	114425180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ES.10075.4	chr13	-	5623	1	NIC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	93779	0	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114430806	114425183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_114425200_114430800
ES.10075.5	chr13	-	8275	2	NNC	ENSMUSG00000021764.9	novel	571	4	NA	NA	87940	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114436645	114425183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_114429926_114433112
ES.10075.6	chr13	-	809	5	NNC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	-523	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	793.382789074732	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACACTTGGCAGTTTCT	NA	False	NA	-19	True	AATAAA	-18	NA	114525317	114425184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494_114524723_114525201
ES.10075.7	chr13	-	490	5	NNC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_2	663.870657583237	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTACACTTGGCAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	114524600	114425186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_114425403_114444352_114444391_114453514_114453566_114487983_114488063_114524494
ES.10075.8	chr13	-	590	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-30	156	0	-3	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTACACTTGGCAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	114524616	114425186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
ES.10075.9	chr13	-	4645	5	NNC	ENSMUSG00000021764.9	novel	1698	5	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	693.07913509209	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTACACTTGGCAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	114524609	114425186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_114429391_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ES.10076.1	chr13	-	3398	4	NIC	ENSMUSG00000021765.10	novel	1851	6	NA	NA	109	28	intron_retention	FALSE	canonical	3	13	junction_1	2.86744175568088	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCTCAGTTTCTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	114595376	114588797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_114590042_114590815_114592439_114592898_114593091_114595037
ES.10076.2	chr13	-	2556	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	-1	-704	-1	24	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCGGTCTCAGTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	114595486	114588801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ES.10076.4	chr13	-	2827	6	FSM	ENSMUSG00000021765.10	ENSMUST00000223640.3	2833	6	6	0	4	0	multi-exon	FALSE	canonical	1	3	junction_1	6.97423830966508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	TATAAA	-36	NA	114595481	114588825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_114590342_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ES.10076.5	chr13	-	3807	4	NIC	ENSMUSG00000021765.10	novel	2833	6	NA	NA	108	0	intron_retention	FALSE	canonical	3	17	junction_3	2.44948974278318	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	TATAAA	-36	NA	114595377	114588825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_114591882_114592219_114592439_114592898_114593091_114595037
ES.10077.1	chr13	-	241	1	Intergenic	novelGene_8461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAACGAATCATCCAGGA	5771	False	NA	NA	False	AATATA	-14	NA	114601330	114601089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114601100_114601300
ES.10078.1	chr13	-	182	1	Intergenic	novelGene_8462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAACCCT	1567	False	NA	NA	False	NA	NA	NA	114605534	114605352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114605400_114605500
ES.10079.1	chr13	-	175	1	Intergenic	novelGene_8463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAACCATGATTA	NA	False	NA	NA	False	NA	NA	NA	114609881	114609706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114609700_114609900
ES.1008.1	chr1	-	3072	2	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAGAGGCAATATCTTA	NA	False	NA	NA	False	NA	NA	NA	90833661	90816378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_90819382_90833592
ES.10080.1	chr13	-	4296	1	Intergenic	novelGene_8464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	114763089	114758793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_114758800_114763100
ES.10081.1	chr13	+	1208	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	-14	-1	-14	1	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGATCCTGTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	114954757	114965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ES.10081.2	chr13	+	1066	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	-17	806	-2	1	multi-exon	FALSE	canonical	3	20	junction_1	59.3450924677011	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGATCCTGTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	114954777	114965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ES.10081.3	chr13	+	1979	6	NIC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	3	1	intron_retention	FALSE	canonical	3	133	junction_2	18.6010752377383	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGATCCTGTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	114954782	114965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114962818_114964824
ES.10081.4	chr13	+	1460	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	18	-285	-4	2	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATCCAGTTTTTGATT	NA	False	NA	NA	False	ATTAAA	-22	NA	114954789	114965544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ES.10081.5	chr13	+	1337	7	NNC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.3650280425803	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGATCCTGTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	114954798	114965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_114954860_114955871_114955994_114957337_114957653_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ES.10081.7	chr13	+	1640	3	ISM	ENSMUSG00000015536.15	ENSMUST00000170985.8	2116	5	6292	282	5657	1	3prime_fragment	FALSE	canonical	3	159	junction_1	15.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGATCCTGTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	114961097	114965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_114961231_114961746_114962818_114964824
ES.10081.8	chr13	+	831	4	ISM	ENSMUSG00000015536.15	ENSMUST00000184672.8	1447	7	6260	14	5661	0	3prime_fragment	FALSE	canonical	3	158	junction_2	14.8548533034381	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGTCTAAAAATAGATC	NA	False	NA	NA	False	AATAAA	-10	NA	114961101	114965251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_114961231_114961746_114961898_114962693_114962818_114964824
ES.10082.1	chr13	-	3795	1	ISM	ENSMUSG00000042284.11	ENSMUST00000061673.9	10967	29	145024	50	144770	-50	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAATGTGATTAC	8663	False	NA	NA	False	AATAAA	-17	NA	115093476	115089681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_115089700_115093500
ES.10083.1	chr13	-	6318	28	NIC	ENSMUSG00000042284.11	novel	10967	29	NA	NA	-23	-4497	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.908729196028541	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATATTTTGAAACTTTT	NA	False	NA	NA	False	ATTAAA	-9	NA	115238437	115094128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115171808_115171922_115185818_115185940_115238006
ES.10083.2	chr13	-	5525	29	FSM	ENSMUSG00000042284.11	ENSMUST00000061673.9	10967	29	-39	5481	-39	-5481	multi-exon	FALSE	canonical	0	0	junction_1	0.920292766194652	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTCTGAGAATTATC	NA	False	NA	NA	False	TTTAAA	-4	NA	115238539	115095112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ES.10083.3	chr13	-	5320	29	FSM	ENSMUSG00000042284.11	ENSMUST00000061673.9	10967	29	1	5646	1	-5646	multi-exon	FALSE	canonical	0	0	junction_1	0.920292766194652	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGCTGTAAAATGTGCT	NA	False	NA	NA	False	AATGAA	-28	NA	115238499	115095277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ES.10083.4	chr13	-	4326	30	NNC	ENSMUSG00000042284.11	novel	10967	29	NA	NA	1	-6586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.913630434447708	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCCGAGTGACACTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	115238499	115096217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115128979_115129032_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ES.10083.5	chr13	-	3982	29	FSM	ENSMUSG00000042284.11	ENSMUST00000061673.9	10967	29	398	6587	144	-6587	multi-exon	FALSE	canonical	0	0	junction_1	0.920292766194652	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCCGAGTGACACTCA	NA	False	NA	NA	False	AATAAA	-18	NA	115238102	115096218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ES.10083.6	chr13	-	4767	30	NNC	ENSMUSG00000042284.11	novel	10967	29	NA	NA	-175	-6588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.887219333121973	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCCGAGTGACACTC	NA	False	NA	NA	False	AATAAA	-17	NA	115238675	115096219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115177986_115178200_115185818_115185940_115238006
ES.10083.7	chr13	-	3139	17	ISM	ENSMUSG00000042284.11	ENSMUST00000224865.2	3321	19	-241	3500	-6	-3500	5prime_fragment	FALSE	canonical	0	0	junction_2	0.75	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGGCAGTTCACAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	115238506	115122254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ES.10083.8	chr13	-	1972	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-24	-348	-24	348	multi-exon	FALSE	canonical	3	85	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTCAGGGATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	115226746	115224542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_115225498_115225729
ES.10083.9	chr13	-	1688	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	-30	-58	-30	58	multi-exon	FALSE	canonical	3	85	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAGAAAAAAAAAAAAAAA	NA	False	NA	57	True	TTTAAA	-28	NA	115226752	115224832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_115225498_115225729
ES.10084.1	chr13	+	100	1	FSM	ENSMUSG00000061669.7	ENSMUST00000081679.7	354	1	295	-41	295	41	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	116290611	116290711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_116290600_116290700
ES.10085.1	chr13	+	188	1	Intergenic	novelGene_8465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTTTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	116385137	116385325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_116385100_116385300
ES.10086.1	chr13	-	2536	6	FSM	ENSMUSG00000042258.14	ENSMUST00000036060.13	2516	6	-13	-7	-13	7	multi-exon	FALSE	canonical	1	2	junction_1	0.4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATGATTCAGGGTCCCT	NA	False	NA	NA	False	AATAAA	-26	NA	116446238	116434809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_116436133_116438146_116438315_116439581_116439869_116441753_116442014_116444809_116445000_116445930
ES.10087.1	chr13	+	3022	1	Intergenic	novelGene_8466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTATGTTTTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	116446327	116449349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_116446300_116449300
ES.10088.1	chr13	+	127	1	Intergenic	novelGene_8467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116868501	116868628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_116868500_116868600
ES.10089.1	chr13	+	1193	2	FSM	ENSMUSG00000021728.9	ENSMUST00000224821.2	996	2	-167	-30	-145	-14	multi-exon	FALSE	canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATCTTAAAACTGTGC	NA	False	NA	NA	False	NA	NA	NA	117357106	117366683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117357494_117365877
ES.10089.10	chr13	+	6361	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	428	-3866	-16	3866	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTGGGAAATGTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	117357235	117414817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.11	chr13	+	4124	8	NIC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	-5	-1157	intron_retention	FALSE	canonical	3	356	junction_7	31.184768652635	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTGTGTTCTGTGAGC	NA	False	NA	1	True	ATTAAA	-15	NA	117357246	117409794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.12	chr13	+	166	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	175	1795	175	-1751	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	117364736	117364902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117364700_117364900
ES.10089.13	chr13	+	177	1	Intergenic	novelGene_8469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACATATGTTAA	NA	False	NA	NA	False	NA	NA	NA	117370690	117370867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_117370700_117370900
ES.10089.2	chr13	+	6355	10	NNC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	-124	3868	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	132.855625714347	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGGGAAATGTATTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	117357127	117414819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580_117414073_117414188
ES.10089.3	chr13	+	1504	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	332	1087	-112	-1087	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACTTAATAATCCAC	NA	False	NA	-67	True	AATAAA	-33	NA	117357139	117409864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.4	chr13	+	2277	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	332	314	-112	-314	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTTGTGCTGCTGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	117357139	117410637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.6	chr13	+	5056	8	NIC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	-97	-317	intron_retention	FALSE	canonical	3	356	junction_7	31.184768652635	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCCCTTGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-23	NA	117357154	117410634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.7	chr13	+	4362	8	NIC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	-91	-1005	intron_retention	FALSE	canonical	3	356	junction_7	31.184768652635	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAAGTGTTTGCC	NA	False	NA	15	True	ATTAAA	-16	NA	117357160	117409946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117404136_117405465_117405500_117408580_117408636_117409580
ES.10089.8	chr13	+	6228	6	NIC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	-90	-319	intron_retention	FALSE	canonical	3	359	junction_2	19.3762741516526	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGTCCCTTGTGCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	117357161	117410632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_117357494_117369262_117369353_117385807_117386323_117400930_117404136_117405465_117405500_117408580
ES.1009.1	chr1	+	2242	16	FSM	ENSMUSG00000026303.7	ENSMUST00000027528.7	4499	16	-18	2275	-18	-2275	multi-exon	FALSE	canonical	0	0	junction_5	0.718021974284601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTTCTCTGCCTAC	NA	False	NA	NA	False	AATACA	-20	NA	90842788	90876589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90842976_90849566_90849701_90855704_90855927_90856044_90856158_90857811_90857916_90859215_90859339_90861038_90861244_90863034_90863175_90865375_90865460_90867080_90867234_90867441_90867598_90869409_90869503_90870593_90870681_90871416_90871472_90873335_90873437_90876304
ES.1009.2	chr1	+	4207	11	NIC	ENSMUSG00000026303.7	novel	4499	16	NA	NA	44	2396	intron_retention	FALSE	canonical	0	0	junction_5	0.7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCATACCATGGCAAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	90842850	90870357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90842976_90849566_90849701_90855704_90855927_90856044_90856158_90857811_90857916_90859215_90861244_90863034_90863175_90865375_90865460_90867080_90867234_90867441_90867598_90869409
ES.1009.3	chr1	+	179	1	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAATCAGCAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	90851615	90851794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_90851600_90851800
ES.10090.1	chr13	-	176	1	Intergenic	novelGene_8468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	117359797	117359621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_117359600_117359800
ES.10091.1	chr13	-	179	1	Intergenic	novelGene_8470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	117378417	117378238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_117378200_117378400
ES.10092.1	chr13	-	206	1	Intergenic	novelGene_8471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAATTCTGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	117384779	117384573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_117384600_117384800
ES.10093.1	chr13	-	174	1	Intergenic	novelGene_8472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	117407388	117407214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_117407200_117407400
ES.10094.1	chr13	-	158	1	Intergenic	novelGene_8473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	117487893	117487735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_117487700_117487900
ES.10095.1	chr13	+	4314	8	FSM	ENSMUSG00000021730.9	ENSMUST00000006991.9	14141	8	-2	9829	-2	-9829	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTTTGGAAATACACAT	NA	False	NA	NA	False	AATAAA	-17	NA	117739013	118114125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_117739632_117793141_117793566_117946442_117946605_118010401_118010621_118039282_118039430_118062079_118062321_118108102_118108268_118111787
ES.10095.2	chr13	+	4649	1	ISM	ENSMUSG00000021730.9	ENSMUST00000006991.9	14141	8	373897	6393	373897	-6393	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATATGCAGTGATGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	118112912	118117561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_118112900_118117600
ES.10096.1	chr13	-	6701	2	Antisense	novelGene_ENSMUSG00000021730.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCTGAGCAGAGTGTC	NA	False	NA	NA	False	AAAAAG	-18	NA	118080089	118073348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_118079015_118079054
ES.10097.1	chr13	-	128	1	Intergenic	novelGene_8474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	118180706	118180578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_118180600_118180700
ES.10098.1	chr13	+	3409	2	Genic_Genomic	ENSMUSG00000097411.3	novel	1494	1	NA	NA	34	2827	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGAGAGTTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	118523199	118527487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_118524112_118524990
ES.10099.1	chr13	-	4486	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	1	-1168	1	1168	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTCCAGTTCTTAATG	NA	False	NA	NA	False	ATTAAA	-27	NA	118523787	118513748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.10	chr13	-	1833	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	11	1475	11	-1475	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATACACATAAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	118523777	118516391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.11	chr13	-	1646	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	-7	1680	-7	-1680	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTTGCTATTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	118523795	118516596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.12	chr13	-	3454	3	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1698	0	-1698	intron_retention	FALSE	canonical	3	1977	junction_1	31	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTGGGCTATCTTTAA	NA	False	NA	NA	False	AATATA	-43	NA	118523788	118516614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_118517206_118519411_118519589_118521102
ES.10099.13	chr13	-	5588	3	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	0	-1721	intron_retention	FALSE	non_canonical	0	0	junction_1	1019.5	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTTGTGTATCGCTAA	NA	False	NA	NA	False	AATATA	-20	NA	118523788	118516637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118518749_118518797_118519589_118521102
ES.10099.14	chr13	-	2922	4	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	-52	1721	-52	-1721	intron_retention	FALSE	canonical	3	1748	junction_3	125.151463790436	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTTGTGTATCGCTAA	NA	False	NA	NA	False	AATATA	-20	NA	118523840	118516637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769
ES.10099.15	chr13	-	1529	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	-51	1841	-51	-1841	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTGACTGAAAGATT	NA	False	NA	-13	True	ATTAAA	-16	NA	118523839	118516757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.16	chr13	-	2750	4	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1841	0	-1841	intron_retention	FALSE	canonical	3	1748	junction_3	125.151463790436	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTGACTGAAAGATT	NA	False	NA	-13	True	ATTAAA	-16	NA	118523788	118516757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769
ES.10099.17	chr13	-	3311	3	ISM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1841	0	-1841	intron_retention	FALSE	canonical	3	1977	junction_1	31	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTTGACTGAAAGATT	NA	False	NA	-13	True	ATTAAA	-16	NA	118523788	118516757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_118517206_118519411_118519589_118521102
ES.10099.18	chr13	-	5465	2	NIC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	10	-1883	intron_retention	FALSE	canonical	3	2039	junction_1	0	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTATGTTGACCTGT	NA	False	NA	-7	True	ATTAAA	-23	NA	118523778	118516799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_118519589_118521102
ES.10099.19	chr13	-	1360	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	10	-1891	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	780.334543641379	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAGATTTCTTATGT	NA	False	NA	-15	True	ATTAAA	-15	NA	118523778	118516807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187_118523307_118523364
ES.10099.2	chr13	-	4434	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	1	1166	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	780.334543641379	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTTCCAGTTCTTAA	NA	False	NA	NA	False	ATTAAA	-25	NA	118523787	118513750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515224_118515273_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.21	chr13	-	1933	5	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	3	-1891	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	835.556999850998	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAGATTTCTTATGT	NA	False	NA	-15	True	ATTAAA	-15	NA	118523785	118516807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118522679
ES.10099.22	chr13	-	1399	5	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	15	-1891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	865.247074539984	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAGATTTCTTATGT	NA	False	NA	-15	True	ATTAAA	-15	NA	118523773	118516807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118517206_118519411_118519589_118521102_118521178_118521752_118521916_118523187
ES.10099.24	chr13	-	2414	5	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	0	-1922	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1004.23926431902	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCTGCTATTAAACAC	NA	False	NA	-46	True	AATAAA	-19	NA	118523788	118516838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118517206_118519411_118519589_118521102_118521205_118521769_118521916_118522166
ES.10099.25	chr13	-	1708	5	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	34	-1925	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	836.415716016862	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACTGTCTGCTATTAAA	NA	False	NA	-49	True	AATAAA	-16	NA	118523754	118516841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118522839
ES.10099.3	chr13	-	4287	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	-968	0	968	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAGTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	118523788	118513948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.4	chr13	-	4236	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	1	967	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	780.334543641379	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCAGTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	118523787	118513949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515218_118515266_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.5	chr13	-	3719	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	11	461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	780.334543641379	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGTCTAGCATTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	118523777	118514455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515224_118515273_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.6	chr13	-	3318	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	2	-1	2	1	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGAGGCCTGAGTGTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	118523786	118514915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.7	chr13	-	1539	2	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	6712	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGAGGCCTGAGTGTT	NA	False	NA	NA	False	TTTAAA	-19	NA	118516505	118514916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515224_118515273
ES.10099.8	chr13	-	3206	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	18	-47	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	780.334543641379	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	118523770	118514963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515220_118515267_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.10099.9	chr13	-	3145	6	NNC	ENSMUSG00000021731.11	novel	3319	5	NA	NA	11	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	780.334543641379	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATCGTATGTTTGCTT	NA	False	NA	NA	False	TTTAAA	-30	NA	118523777	118515029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_118515224_118515273_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ES.101.1	chr1	+	4807	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	-24	815	-24	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGCTTGCTAGAT	NA	False	NA	18	True	AATAAA	-42	NA	12762476	12930601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.11	chr1	+	5279	21	FSM	ENSMUSG00000016918.16	ENSMUST00000180062.8	4636	21	175	-818	-34	-3	multi-exon	FALSE	canonical	0	0	junction_1	11.3950647211852	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACTCGTTTCAGAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	12762721	12931413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.12	chr1	+	4246	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	221	1131	-34	-310	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTTGGTTCAATGAT	NA	False	NA	NA	False	NA	NA	NA	12762721	12930285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.13	chr1	+	3171	22	NNC	ENSMUSG00000016918.16	novel	4563	22	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	12.8048318544549	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGCAAGAATGACCGGC	NA	False	NA	-2	True	AATAAA	-22	NA	12762755	12930581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12930372
ES.101.14	chr1	+	5437	23	NNC	ENSMUSG00000016918.16	novel	5598	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1530358755224	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	12762758	12931414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12762909_12788908_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.15	chr1	+	5065	23	NNC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	-227	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1530358755224	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTAGTTGAGTCCTT	NA	False	NA	NA	False	AGTAAA	-21	NA	12788455	12931131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12788517_12788908_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.16	chr1	+	5617	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	-170	-817	-100	2	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGTTTCAGAGAAATGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	12788582	12931418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.17	chr1	+	4654	22	NNC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	12.0734712275713	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCTCTCTGTGCTTGCT	NA	False	NA	14	True	AATAAA	-38	NA	12788650	12930597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878151_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.18	chr1	+	4644	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	-19	5	-19	1	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTCTCTGTGCTTGC	NA	False	NA	13	True	AATAAA	-37	NA	12788733	12930596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.19	chr1	+	5404	21	NIC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	11.8726576637247	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTCGTTTCAGAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	12788755	12931412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12929035
ES.101.2	chr1	+	3008	14	ISM	ENSMUSG00000016918.16	ENSMUST00000186051.7	4563	22	-253	13350	2	-1358	5prime_fragment	FALSE	canonical	2	8	junction_1	10.3226068905946	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCCTGGAATCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	12762502	12909363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582
ES.101.20	chr1	+	4611	21	NIC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	150	226	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.3950647211852	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGTGTTACGTTATT	NA	False	NA	NA	False	AAAACA	-15	NA	12788902	12930827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_12789008_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.21	chr1	+	4983	21	NNC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	161	-288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	11.8726576637247	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTGTAGTTGAGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	12788913	12931128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918691_12929026
ES.101.22	chr1	+	5169	21	NNC	ENSMUSG00000016918.16	novel	747	4	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3950647211852	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCGTTTCAGAGAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	12855693	12931415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12855769_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.23	chr1	+	4586	18	NNC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	11452	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	11.7823397256981	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	12867118	12931414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12867230_12875403_12875556_12878151_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.24	chr1	+	3822	18	NNC	ENSMUSG00000016918.16	novel	747	4	NA	NA	17818	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1618269434356	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATGACCGGCTCTCTC	NA	False	NA	4	True	AATAAA	-28	NA	12873484	12930587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12873585_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.25	chr1	+	4517	17	NNC	ENSMUSG00000016918.16	novel	4630	22	NA	NA	19856	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	12.2007940315375	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCGTTTCAGAGAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	12875522	12931415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920897_12921018_12929035
ES.101.26	chr1	+	3773	12	ISM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	102263	-812	-15236	-3	3prime_fragment	FALSE	canonical	3	34	junction_6	7.58314791042644	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACTCGTTTCAGAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	12891015	12931413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.27	chr1	+	3591	10	ISM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	117580	-816	81	1	3prime_fragment	FALSE	canonical	3	34	junction_4	8.14376986747053	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGTTTCAGAGAAATGAA	NA	False	NA	NA	False	AATAAA	-18	NA	12906332	12931417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.28	chr1	+	2944	7	NNC	ENSMUSG00000016918.16	novel	2682	4	NA	NA	-2081	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8451290494093	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	12910933	12931414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12910956_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.3	chr1	+	5590	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	10	-2	10	2	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGTTTCAGAGAAATGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	12762510	12931418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.4	chr1	+	4584	21	NIC	ENSMUSG00000016918.16	novel	5598	22	NA	NA	104	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	12.7499019604074	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAATGACCGGCTCTCT	NA	False	NA	3	True	AATAAA	-27	NA	12762650	12930586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12929035
ES.101.5	chr1	+	5138	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	175	285	-80	-285	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTAGTTGAGTCCTT	NA	False	NA	NA	False	AGTAAA	-21	NA	12762675	12931131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.101.6	chr1	+	5357	21	NIC	ENSMUSG00000016918.16	novel	5598	22	NA	NA	-50	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	12.7499019604074	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCGTTTCAGAGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	12762705	12931414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12929035
ES.101.7	chr1	+	6802	21	NNC	ENSMUSG00000016918.16	novel	5598	22	NA	NA	-43	0	intron_retention	FALSE	canonical	2	2	junction_6	12.916655913974	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGCTTGCTAGAT	NA	False	NA	18	True	AATAAA	-42	NA	12762712	12930601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878151_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12921018_12929035
ES.101.8	chr1	+	924	6	NNC	ENSMUSG00000016918.16	novel	5598	22	NA	NA	-39	10440	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	17.1697408250678	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	12762716	12869482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12869389
ES.101.9	chr1	+	4121	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	219	1258	-36	-437	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCTAGAATTGTGCCT	NA	False	NA	NA	False	TATAAA	-14	NA	12762719	12930158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ES.1010.1	chr1	-	2750	7	NNC	ENSMUSG00000026304.14	novel	1557	6	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.63299316185545	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTCATGAGGTTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	90897147	90885856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90895229_90896387_90896951
ES.1010.2	chr1	-	1872	6	FSM	ENSMUSG00000026304.14	ENSMUST00000027529.12	1831	6	-44	3	-44	-1	multi-exon	FALSE	canonical	1	2	junction_1	1.2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTTCATGAGGTTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	90897427	90885857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90896951
ES.10100.1	chr13	+	4189	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	-70	-5	-70	5	multi-exon	FALSE	canonical	3	7	junction_2	4	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCTTATTTTATTT	NA	False	NA	NA	False	AATAAA	-33	NA	118851164	118928656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_118852248_118918041_118918146_118925654
ES.10100.2	chr13	+	3873	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	-46	287	-46	-287	multi-exon	FALSE	canonical	3	7	junction_2	4	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGAATTCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	118851188	118928364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_118852248_118918041_118918146_118925654
ES.10100.3	chr13	+	4056	4	NNC	ENSMUSG00000021732.15	novel	4114	3	NA	NA	-27	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.12825877028341	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCTTATTTTATTT	NA	False	NA	NA	False	AATAAA	-33	NA	118851207	118928656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_118851467_118851556_118852248_118918041_118918146_118925654
ES.10101.1	chr13	-	180	1	Intergenic	novelGene_8475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118936150	118935970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_118936000_118936200
ES.10102.1	chr13	+	177	1	Intergenic	novelGene_8476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAC	NA	False	NA	NA	False	NA	NA	NA	119402067	119402244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_119402100_119402200
ES.10103.1	chr13	+	1268	1	Antisense	novelGene_ENSMUSG00000116207.2_AS_novelGene_ENSMUSG00000025453.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	7740	False	NA	NA	False	NA	NA	NA	119474135	119475403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_119474100_119475400
ES.10104.1	chr13	+	2867	1	Intergenic	novelGene_8478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	119513578	119516445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_119513600_119516400
ES.10104.2	chr13	+	2317	4	Antisense	novelGene_ENSMUSG00000116207.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGCTCTATAAAATAAAA	NA	False	NA	NA	False	AAAACA	-40	NA	119516074	119525844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_119516586_119516797_119518400_119523114_119523204_119525729
ES.10104.3	chr13	+	3948	1	Antisense	novelGene_ENSMUSG00000116207.2_AS_novelGene_ENSMUSG00000025453.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGCTCTATAAAATAAAA	NA	False	NA	NA	False	AAAACA	-40	NA	119521896	119525844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_119521900_119525800
ES.10105.1	chr13	-	4674	1	Intergenic	novelGene_8477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTGTTTTGAACAT	NA	False	NA	NA	False	AATAAA	-15	NA	119471274	119466600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_119466600_119471300
ES.10105.2	chr13	-	2049	2	ISM	ENSMUSG00000025453.19	ENSMUST00000069902.13	3122	15	70604	-1072	70604	1072	3prime_fragment	FALSE	canonical	3	237	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGTTTTAGTTTATGG	NA	False	NA	NA	False	NA	NA	NA	119474929	119470911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_119472943_119474911
ES.10105.3	chr13	-	2041	9	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	36447	0	36447	0	3prime_fragment	FALSE	canonical	3	207	junction_7	11.2998893799895	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTTCGTCTCTGATG	NA	False	NA	NA	False	AATAAA	-17	NA	119509041	119472063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931
ES.10105.4	chr13	-	5984	3	ISM	ENSMUSG00000025453.19	ENSMUST00000069902.13	3122	15	64180	82	64180	-82	3prime_fragment	FALSE	canonical	3	214	junction_2	11.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTAGCTTCGTCTCTGA	7053	False	NA	NA	False	AATAAA	-15	NA	119481353	119472065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_119472943_119474911_119475028_119476362
ES.10105.5	chr13	-	6279	1	NIC	ENSMUSG00000025453.19	novel	3122	15	NA	NA	67189	-82	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTAGCTTCGTCTCTGA	10017	False	NA	NA	False	AATAAA	-15	NA	119478344	119472065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_119472100_119478300
ES.10105.6	chr13	-	3227	4	ISM	ENSMUSG00000025453.19	ENSMUST00000069902.13	3122	15	52219	87	52219	-87	3prime_fragment	FALSE	canonical	3	214	junction_2	10.8423039781937	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGATGTAGCTTCGTC	NA	False	NA	NA	False	AATAAA	-10	NA	119493314	119472070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194
ES.10105.7	chr13	-	2013	9	NNC	ENSMUSG00000025453.19	novel	3122	15	NA	NA	5	-87	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	69.7311802567546	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGATGTAGCTTCGTC	NA	False	NA	NA	False	AATAAA	-10	NA	119545528	119472070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_119472943_119474911_119474947_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
ES.10105.8	chr13	-	3595	1	NIC	ENSMUSG00000025453.19	novel	3122	15	NA	NA	41628	-10044	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTTGG	NA	False	NA	NA	False	TTTAAA	-33	NA	119503905	119500310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_119500300_119503900
ES.10105.9	chr13	-	2110	4	FSM	ENSMUSG00000025453.19	ENSMUST00000144599.2	1885	4	-224	-1	-224	1	multi-exon	FALSE	canonical	3	169	junction_3	27.3536509852382	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGTTGAGACTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	119545757	119530006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_119531365_119533282_119533513_119541087_119541291_119545438
ES.10106.1	chr13	+	1457	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-229	297	-229	75	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCAGTTTTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	119564907	119593630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.10	chr13	+	2814	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-292	29	29	-29	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	17	True	AATAAA	-2	NA	119565165	119594725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.11	chr13	+	2637	12	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	-62	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.19259872614	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTAAAATGGTATCT	NA	False	NA	34	True	AATAAA	-19	NA	119565395	119594742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565607_119565815_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586446_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.12	chr13	+	1772	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-52	831	-52	-4	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGCTAGCTGGTTA	NA	False	NA	105	True	AATAAA	-32	NA	119565405	119593923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.13	chr13	+	2425	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	-43	169	-43	-169	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATGTGCATGTAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	119565414	119594585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.14	chr13	+	2831	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-245	-855	-34	-6	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGGTATCTTAAAGA	NA	False	NA	40	True	AATAAA	-25	NA	119565423	119594748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.15	chr13	+	1998	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-241	-26	-30	-8	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTTTGCTAGCTG	NA	False	NA	101	True	AATAAA	-28	NA	119565427	119593919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.16	chr13	+	2489	12	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	-28	-38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.098582265575	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119565429	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565509_119565812_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.17	chr13	+	1908	12	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	-26	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.105661132025	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGAAATGTTGAAA	NA	False	NA	84	True	AATAAA	-11	NA	119565431	119593902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565606_119565812_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.18	chr13	+	2814	10	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	-24	-38	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	151.935658896931	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119565433	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.19	chr13	+	1849	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	-24	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	133.11051799163	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGAAATGTTGAAA	NA	False	NA	84	True	AATAAA	-11	NA	119565433	119593902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582146_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.2	chr13	+	1731	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-210	4	-210	-4	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGCTAGCTGGTTA	NA	False	NA	105	True	AATAAA	-32	NA	119564926	119593923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.20	chr13	+	1905	11	NIC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	142.732617155295	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGCTAGCTGGTTA	NA	False	NA	105	True	AATAAA	-32	NA	119565443	119593923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584296_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.21	chr13	+	1698	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-224	257	-13	81	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	119565444	119593636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.22	chr13	+	2119	11	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTTTGCTAGCTG	NA	False	NA	101	True	AATAAA	-28	NA	119565444	119593919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.24	chr13	+	1713	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	162.969966558259	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTTTGCTAGCTG	NA	False	NA	101	True	AATAAA	-28	NA	119565458	119593919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565697_119566695_119566866_119574504_119574691_119577296_119577414_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.25	chr13	+	2925	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAAATGGTATCTTA	NA	False	NA	36	True	AATAAA	-21	NA	119565463	119594744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.26	chr13	+	1996	11	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	7	-39	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAACTTAAAATGTGTAT	NA	False	NA	-2	True	AATAAA	-10	NA	119565464	119593816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.27	chr13	+	1756	12	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.098582265575	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGCTAGCTGGTTA	NA	False	NA	105	True	AATAAA	-32	NA	119565464	119593923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565607_119565815_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.28	chr13	+	1765	12	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	160.39749178806	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTTTGCTAGCTG	NA	False	NA	101	True	AATAAA	-28	NA	119565466	119593919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119590484_119590543_119592231_119592326_119593523
ES.10106.29	chr13	+	2763	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	9	-169	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATGTGCATGTAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	119565466	119594585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.3	chr13	+	2440	10	NNC	ENSMUSG00000025451.16	novel	1525	11	NA	NA	-173	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	151.165186402977	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119564963	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587358_119592231_119592326_119593523
ES.10106.30	chr13	+	1891	12	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.105661132025	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTTTGCTAGCTG	NA	False	NA	101	True	AATAAA	-28	NA	119565467	119593919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565602_119565806_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.31	chr13	+	2332	10	NIC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	11	-38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	125.413488947069	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119565468	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119565697_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.33	chr13	+	1573	10	NIC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	13	9	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	133.180746022505	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGAAATGTTGAAA	NA	False	NA	84	True	AATAAA	-11	NA	119565470	119593902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119565697_119566695_119566866_119574504_119574691_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.34	chr13	+	2678	12	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	15	-38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.105661132025	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119565472	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565606_119565815_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.35	chr13	+	2548	12	NNC	ENSMUSG00000025451.16	novel	1731	11	NA	NA	17	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.098582265575	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTTGTTTCTTCTAAC	NA	False	NA	17	True	AATAAA	-2	NA	119565474	119594725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565607_119565815_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.38	chr13	+	2360	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	63	-692	38	-169	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATGTGCATGTAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	119565731	119594585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.39	chr13	+	2178	10	NNC	ENSMUSG00000025451.16	novel	568	8	NA	NA	-5205	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.413488947069	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTAGTTTGTT	NA	False	NA	8	True	ATTAAA	-12	NA	119572197	119594716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119572272_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.4	chr13	+	1454	10	NIC	ENSMUSG00000025451.16	novel	1525	11	NA	NA	-143	-29	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	145.953569481683	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGTATATATATATAA	NA	False	NA	8	True	AATAAA	-20	NA	119564993	119593826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119565177_119566695_119566866_119574504_119574691_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.5	chr13	+	2459	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-111	-823	-111	-4	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGTATCTTAAAGAAT	NA	False	NA	42	True	AATAAA	-27	NA	119565025	119594750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.6	chr13	+	1357	10	NIC	ENSMUSG00000025451.16	novel	1525	11	NA	NA	-104	-30	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	125.413488947069	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGTATATATATATA	NA	False	NA	7	True	AATAAA	-19	NA	119565032	119593825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119565177_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ES.10106.7	chr13	+	5390	11	NNC	ENSMUSG00000025451.16	novel	1525	11	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	145.480032994222	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	False	NA	109	True	AATAAA	-36	NA	119565032	119593927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119589249_119589336_119592326_119593523
ES.10107.1	chr13	-	5848	1	Antisense	novelGene_ENSMUSG00000025451.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAACTTACGGGTCACC	3337	False	NA	NA	False	AAAAAG	-8	NA	119598185	119592337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_119592300_119598200
ES.10107.2	chr13	-	4542	1	Antisense	novelGene_ENSMUSG00000025451.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGGTATCCTCAAAT	3337	False	NA	NA	False	NA	NA	NA	119598185	119593643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_119593600_119598200
ES.10108.1	chr13	+	7020	10	NIC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	-9	1	intron_retention	FALSE	canonical	3	76	junction_1	21.3564689364159	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCATTTCTTACAT	NA	False	NA	10	True	AATAAA	-20	NA	119599294	119622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.10	chr13	+	3444	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_1	21.4818778131747	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCATTTCTTACATCA	NA	False	NA	12	True	AATAAA	-22	NA	119599303	119622656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.11	chr13	+	3377	12	NIC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_1	28.4982238101005	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599304	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.12	chr13	+	974	4	ISM	ENSMUSG00000062822.9	ENSMUST00000225726.2	2795	13	0	16357	0	-65	5prime_fragment	FALSE	canonical	3	76	junction_1	22.7596133534821	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTCTGCAGATGTGG	NA	False	NA	4	True	AATAAA	-16	NA	119599311	119606296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050
ES.10108.13	chr13	+	2620	14	FSM	ENSMUSG00000062822.9	ENSMUST00000225186.2	2627	14	4	3	0	0	multi-exon	FALSE	canonical	1	1	junction_2	45.7272593593877	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599311	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119599656_119601100_119601227_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.14	chr13	+	2493	13	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	29.2546292633035	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599312	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.15	chr13	+	2678	14	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	45.0708843421628	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599316	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119601100_119601227_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.17	chr13	+	7527	12	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_3	49.7818381034557	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599323	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119602841_119603402_119603493_119606050_119608575_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622048
ES.10108.18	chr13	+	2436	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	40.7832407647152	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGAACTATTTCATT	NA	False	NA	2	True	AATAAA	-12	NA	119599323	119622646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.19	chr13	+	6309	11	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	89	junction_3	17.895250766614	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599326	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.2	chr13	+	2798	14	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	45.5583376581885	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599299	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119602193_119602486_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.20	chr13	+	2444	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	35.5078852841925	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTATTTCATTTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	119599327	119622652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119620988_119621030_119622262
ES.10108.21	chr13	+	2372	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	38.7978443637366	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599337	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119620988_119621030_119622262
ES.10108.22	chr13	+	2998	14	NNC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	52.0283263767165	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599337	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119602193_119602486_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610731_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.23	chr13	+	5319	11	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	25	0	intron_retention	FALSE	canonical	3	11	junction_9	36.3737542742016	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599344	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119620988_119621030_119622262
ES.10108.24	chr13	+	4412	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	51	0	intron_retention	FALSE	canonical	3	42	junction_1	29.7596432041173	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599370	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.27	chr13	+	6231	11	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	58	1	intron_retention	FALSE	canonical	3	16	junction_3	35.6775839989201	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCATTTCTTACAT	NA	False	NA	10	True	AATAAA	-20	NA	119599377	119622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119602841_119603402_119603493_119606050_119606698_119608702_119608777_119610368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.28	chr13	+	4356	11	NNC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.6944441208827	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599377	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119602546_119602841_119603402_119603493_119603994_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119620988_119621030_119622262
ES.10108.29	chr13	+	2653	13	NIC	ENSMUSG00000062822.9	novel	2795	13	NA	NA	62	-9	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	40.8880585664486	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTTTGAACTATTTCA	NA	False	NA	0	True	AATAAA	-10	NA	119599381	119622644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610731_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.3	chr13	+	3027	16	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.2043868663373	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTATTTCATTTCTTA	NA	False	NA	7	True	AATAAA	-17	NA	119599302	119622651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119601100_119601227_119601815_119601924_119602193_119602486_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.30	chr13	+	3294	13	NNC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	62	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.5109113900783	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGAACTATTTCATT	NA	False	NA	2	True	AATAAA	-12	NA	119599381	119622646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608702_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119621420
ES.10108.31	chr13	+	6215	3	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	115	2	intron_retention	FALSE	non_canonical	0	0	junction_1	1	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGATCTTGAAATCTAAA	NA	False	NA	1	True	AATAAA	-17	NA	119599434	119606363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119603169_119603380_119603493_119603994
ES.10108.32	chr13	+	3826	3	ISM	ENSMUSG00000062822.9	ENSMUST00000224081.2	978	4	724	-618	714	618	3prime_fragment	FALSE	canonical	3	115	junction_1	7.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTGGCTTTTCCTA	NA	False	NA	NA	False	AGTAAA	-14	NA	119600033	119606979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_119602841_119603402_119603493_119606050
ES.10108.33	chr13	+	3070	3	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	1140	-59	intron_retention	FALSE	non_canonical	0	0	junction_1	65	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAGATGTGGAAATTT	NA	False	NA	10	True	AATAAA	-22	NA	119600459	119606302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119603168_119603382_119603493_119606050
ES.10108.34	chr13	+	2621	12	ISM	ENSMUSG00000062822.9	ENSMUST00000224312.2	3406	14	2819	0	2819	0	3prime_fragment	FALSE	canonical	3	76	junction_5	21.4818778131747	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119602138	119622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.36	chr13	+	1644	10	NNC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	8791	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1580500480573	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTATTTCATTTCTTA	NA	False	NA	7	True	AATAAA	-17	NA	119608110	119622651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119608575_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.4	chr13	+	2567	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	-1	-1	-1	1	multi-exon	FALSE	canonical	3	76	junction_1	23.5189049253763	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCATTTCTTACAT	NA	False	NA	10	True	AATAAA	-20	NA	119599302	119622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.5	chr13	+	3874	3	NIC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-1	-65	intron_retention	FALSE	canonical	3	115	junction_1	7.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTCTGCAGATGTGG	NA	False	NA	4	True	AATAAA	-16	NA	119599302	119606296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119602841_119603402_119603493_119606050
ES.10108.6	chr13	+	2273	12	NIC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	39.2994437745846	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCATTTCTTACAT	NA	False	NA	10	True	AATAAA	-20	NA	119599302	119622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_119599656_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10108.7	chr13	+	4294	3	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	-1	5	intron_retention	FALSE	non_canonical	0	0	junction_1	65	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCTTGAAATCTAAAAAC	NA	False	NA	4	True	AATAAA	-20	NA	119599302	119606366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119603169_119603380_119603493_119606050
ES.10108.8	chr13	+	6781	2	NNC	ENSMUSG00000062822.9	novel	2565	13	NA	NA	0	-65	intron_retention	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTCTGCAGATGTGG	NA	False	NA	4	True	AATAAA	-16	NA	119599303	119606296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119603169_119603380
ES.10108.9	chr13	+	3267	13	NNC	ENSMUSG00000062822.9	novel	3406	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	45.7046678870623	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTATTTCATTTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	119599303	119622652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_119599656_119601815_119602841_119603402_119603493_119606050_119606698_119608702_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ES.10109.1	chr13	-	209	1	Intergenic	novelGene_8479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAAATATCTGAAAATCA	NA	False	NA	NA	False	NA	NA	NA	119603383	119603174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_119603200_119603400
ES.1011.1	chr1	+	3601	9	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.5951045123867	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90926460	91045036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.10	chr1	+	3784	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.0634846669321	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTGTTCTGGTCTTTG	NA	False	NA	11	True	AATAAA	-25	NA	90981177	91045044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91040374_91040437_91042317
ES.1011.11	chr1	+	3793	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.1368940782395	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTACTGGTTGTTCTGG	NA	False	NA	5	True	AATAAA	-19	NA	90981178	91045038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91021281_91021360_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.12	chr1	+	2133	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981179	91056666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.13	chr1	+	2294	14	NNC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.0058211751529	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981180	91056666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035022_91035113_91038076_91038170_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.14	chr1	+	3775	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.5136654661293	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACTGGTTGTTCTGGTC	NA	False	NA	7	True	AATAAA	-21	NA	90981180	91045040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91012667_91012728_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.18	chr1	+	3524	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-20	-160	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCACTATGTGACTGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	90981208	91044877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.2	chr1	+	3597	9	NNC	ENSMUSG00000026305.16	novel	1031	13	NA	NA	-9080	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	28.7616824090664	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGCCTACTGGTTGTTC	NA	False	NA	2	True	AATAAA	-16	NA	90972085	91045035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_90972238_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.20	chr1	+	2163	13	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-7	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	31.9255862210165	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAACGTTAAAGAG	NA	False	NA	NA	False	TTTAAA	-28	NA	90981221	91056645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.21	chr1	+	3833	11	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.2454252350571	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981230	91045037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91021281_91021360_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91042317
ES.1011.22	chr1	+	3483	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	2	-158	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	33.0319447656356	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACTATGTGACTGCTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	90981230	91044879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91006752_91006804_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.23	chr1	+	3682	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	34.2247473815854	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGCCTACTGGTTGTTC	NA	False	NA	2	True	AATAAA	-16	NA	90981301	91045035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91036301_91036395_91039877_91040020_91042317
ES.1011.24	chr1	+	1375	6	NNC	ENSMUSG00000026305.16	novel	483	2	NA	NA	3410	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7813411800185	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	91042364	91056666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91042528_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.25	chr1	+	2144	5	ISM	ENSMUSG00000026305.16	ENSMUST00000097650.10	2760	23	65694	-18	-759	-4	3prime_fragment	FALSE	canonical	3	22	junction_3	4.7169905660283	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGAGCTGTGTGGGTTTT	2430	False	NA	NA	False	AATGAA	-5	NA	91046922	91056658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.3	chr1	+	3970	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	-318	-7	-308	7	multi-exon	FALSE	canonical	3	45	junction_4	18.7823190848223	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTGTTCTGGTCTTTG	NA	False	NA	11	True	AATAAA	-25	NA	90980857	91045044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.4	chr1	+	4029	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-295	7	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTGTTCTGGTCTTTG	NA	False	NA	11	True	AATAAA	-25	NA	90980870	91045044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ES.1011.5	chr1	+	3804	9	NIC	ENSMUSG00000026305.16	novel	3645	8	NA	NA	-82	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	36.3969006235421	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGGTTGTTCTGGTCTT	NA	False	NA	9	True	AATAAA	-23	NA	90981083	91045042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91040374_91040437_91042317
ES.1011.6	chr1	+	9561	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_8	32.9986321265325	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981119	91056666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91040374_91047743_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.1011.7	chr1	+	3760	9	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.5237508342175	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGCCTACTGGTTGTTC	NA	False	NA	2	True	AATAAA	-16	NA	90981151	91045035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91036301_91036395_91039877_91040020_91042317
ES.1011.8	chr1	+	3828	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	32.7395257022742	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTACTGGTTGTTCT	NA	False	NA	3	True	AATAAA	-17	NA	90981156	91045036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91042317
ES.1011.9	chr1	+	2208	13	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981176	91056666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ES.10110.1	chr13	+	4217	2	FSM	ENSMUSG00000074634.13	ENSMUST00000178948.2	1648	2	-2568	-1	-2568	1	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTTTCTTTTGTTC	NA	False	NA	NA	False	AATAAA	-33	NA	120065617	120071995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120068567_120070727
ES.10110.2	chr13	+	1767	3	NNC	ENSMUSG00000074634.13	novel	4531	3	NA	NA	3054	1804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120071239	120074399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120071396_120072021_120072195_120072961
ES.10111.1	chr13	+	1482	3	NNC	ENSMUSG00000074715.4	novel	1396	2	NA	NA	-5815	-351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGCTTATATTTGTA	NA	False	NA	NA	False	NA	NA	NA	120105236	120112341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120105367_120107404_120107532_120111116
ES.10112.1	chr13	+	299	1	Intergenic	novelGene_8480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120117435	120117734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_120117400_120117700
ES.10112.2	chr13	+	150	1	Intergenic	novelGene_8481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGTGAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	120117436	120117586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_120117400_120117600
ES.10113.1	chr13	+	3386	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-137	-4	-70	4	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTTGAGTGTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	120151844	120169622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.13	chr13	+	3361	11	NNC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.174460904468	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCTCTTTGAGTGT	NA	False	NA	13	True	AATAAA	-13	NA	120151964	120169616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120156482_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.14	chr13	+	3059	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	-16	-360	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGTGATAAGTAATGT	NA	False	NA	NA	False	AATAAA	-18	NA	120151965	120169258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.15	chr13	+	3437	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-16	-176	-16	-2	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTTATGCCTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	120151965	120169794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.16	chr13	+	2138	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-34	1360	-16	-1182	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACTTTTCTAGGTT	NA	False	NA	-99	True	NA	NA	NA	120151965	120168436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.17	chr13	+	2969	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-34	529	-16	-351	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTAATGTAGCATTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	120151965	120169267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.18	chr13	+	3241	10	NNC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	209.175099431606	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCAGCTCTTTGAG	NA	False	NA	10	True	AATAAA	-10	NA	120151965	120169613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120161199_120161643_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.2	chr13	+	3447	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	-155	172	-70	6	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGAGTGTTTTTTTTT	NA	False	NA	21	True	AATAAA	-21	NA	120151844	120169624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.20	chr13	+	3319	11	NNC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.174460904468	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCAGCTCTTTGAGTG	NA	False	NA	12	True	AATAAA	-12	NA	120151983	120169615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120156504_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.21	chr13	+	3006	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	4	235	4	-235	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAAGTTCAGATTTAA	NA	False	NA	NA	False	NA	NA	NA	120151985	120169383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.22	chr13	+	3560	12	NNC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	264.315176251184	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151997	120169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120155468_120155741_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.23	chr13	+	3116	10	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	253.227804531126	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCAGCTCTTTGAG	NA	False	NA	10	True	AATAAA	-10	NA	120151999	120169613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.24	chr13	+	3011	9	NNC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	220.168365972498	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120152000	120169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120161199_120161592_120162634_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.25	chr13	+	3099	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	19	127	1	-127	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGTGGGTTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	120152000	120169491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.26	chr13	+	3350	11	NNC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.174460904468	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCAGCTCTTTGAG	NA	False	NA	10	True	AATAAA	-10	NA	120152048	120169613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152168_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.28	chr13	+	3243	7	NIC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	9957	-5	intron_retention	FALSE	canonical	3	589	junction_4	39.8514603106196	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCAGCTCTTTGAG	NA	False	NA	10	True	AATAAA	-10	NA	120161956	120169613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.3	chr13	+	3529	11	NIC	ENSMUSG00000093930.3	novel	3464	11	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151855	120169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.4	chr13	+	2838	9	NIC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	215.385120191716	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGCTCTTTGAGTGTT	NA	False	NA	14	True	AATAAA	-14	NA	120151929	120169617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_120152050_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.5	chr13	+	2114	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-52	1183	15	-1183	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAACTTTTCTAGGT	NA	False	NA	NA	False	NA	NA	NA	120151929	120168435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.6	chr13	+	4152	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	-52	-855	15	677	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCACTAGTTCAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	120151929	120170473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10113.7	chr13	+	3259	10	NNC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.620749888286	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151929	120169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_120152050_120161237_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ES.10114.1	chr13	-	2867	1	Genic_Genomic	ENSMUSG00000095930.2	novel	NA	NA	NA	NA	27085	1651	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-37	NA	120172845	120169978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_120170000_120172800
ES.10115.1	chr13	-	2297	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	-5	1811	-5	-1811	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGTGTGTCTTGCC	NA	False	NA	NA	False	AATAAA	-42	NA	120217423	120173440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
ES.10115.2	chr13	-	154	1	Intergenic	novelGene_8482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	120206919	120206765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_120206800_120206900
ES.10116.1	chr13	+	176	1	Intergenic	novelGene_8483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGGTGAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	120233728	120233904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_120233700_120233900
ES.10117.1	chr13	+	173	1	Intergenic	novelGene_8484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTATTT	NA	False	NA	NA	False	NA	NA	NA	120249259	120249432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_120249300_120249400
ES.10118.1	chr13	-	3003	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-31	-6	-31	6	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTGTTTTGTTT	NA	False	NA	82	True	AGTAAA	-24	NA	120252373	120226716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.10	chr13	-	3187	8	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	61.7407350729398	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252282	120226722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237620_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10118.11	chr13	-	3394	7	FSM	ENSMUSG00000094870.9	ENSMUST00000223722.2	3109	7	-285	0	-285	0	multi-exon	FALSE	canonical	3	13	junction_6	57.4207182895589	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGTGTATGGGTGT	NA	False	NA	75	True	AGTAAA	-17	NA	120252710	120226723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.12	chr13	-	3199	8	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-656	-73	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	56.5021220479228	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120253081	120226796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252746
ES.10118.13	chr13	-	3027	8	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-206	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.4023422615922	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252631	120226796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237873_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.14	chr13	-	3232	9	NNC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	21	-73	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	67.9540285781498	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252320	120226796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120239968_120240057_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10118.16	chr13	-	3244	7	NNC	ENSMUSG00000094870.9	novel	3067	7	NA	NA	-599	-73	intron_retention	FALSE	canonical	2	6	junction_6	59.9666574022598	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120253024	120226796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252746
ES.10118.17	chr13	-	3147	8	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-599	-74	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	57.786376475104	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGCTATTTTCTTTACC	NA	False	NA	1	True	AATAAA	-22	NA	120253024	120226797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252740
ES.10118.19	chr13	-	2998	9	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-22	-77	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	69.6992422842602	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252364	120226800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120239968_120240057_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.2	chr13	-	3203	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	-37	-605	-31	0	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252305	120226722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10118.20	chr13	-	3165	8	NNC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	-228	-77	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	68.6582783331585	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252653	120226800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237620_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.21	chr13	-	3284	8	NNC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	0	-77	intron_retention	FALSE	canonical	2	8	junction_4	72.6388887804963	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252274	120226800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237986_120239968_120240057_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10118.22	chr13	-	4149	5	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	518	78	414	-77	intron_retention	FALSE	canonical	3	154	junction_3	13.1719398723195	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120251823	120226800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395
ES.10118.23	chr13	-	3258	8	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	25	-81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	58.4304924588146	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATATTGCTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	120252316	120226804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251822_120251912
ES.10118.25	chr13	-	3660	6	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	32	-81	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	61.7362130357864	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATATTGCTATTTT	NA	False	NA	-6	True	AATAAA	-15	NA	120244414	120226804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120229551_120230241_120230373_120237302_120237526_120237620_120237986_120239968_120240057_120244307
ES.10118.26	chr13	-	3241	9	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-228	-82	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	72.3390454733818	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCAATATTGCTATTT	NA	False	NA	-7	True	AATAAA	-14	NA	120252653	120226805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120239968_120240057_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.27	chr13	-	2812	9	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	7	-82	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72.8813247684206	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCAATATTGCTATTT	NA	False	NA	-7	True	AATAAA	-14	NA	120252334	120226805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120227050_120227119_120228563_120230241_120230373_120237302_120237526_120237620_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.28	chr13	-	3111	8	NNC	ENSMUSG00000094870.9	novel	3109	7	NA	NA	3	-83	intron_retention	FALSE	canonical	2	8	junction_4	77.2855822549704	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATCAATATTGCTATT	NA	False	NA	-8	True	AATAAA	-13	NA	120252422	120226806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120228563_120230241_120230373_120237302_120237986_120239968_120240057_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.29	chr13	-	2891	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	-29	104	-29	-103	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	False	NA	-28	True	NA	NA	NA	120252371	120226826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.32	chr13	-	2992	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-29	104	-28	-103	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	False	NA	-28	True	NA	NA	NA	120252370	120226826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.33	chr13	-	3208	2	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	20628	104	5991	-103	3prime_fragment	FALSE	canonical	3	189	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	False	NA	-28	True	NA	NA	NA	120231713	120226826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_120228563_120230241
ES.10118.34	chr13	-	3184	7	NIC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	-14	-103	intron_retention	FALSE	canonical	3	47	junction_6	45.1568254961405	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	False	NA	-28	True	NA	NA	NA	120252288	120226826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10118.35	chr13	-	3916	6	NNC	ENSMUSG00000094870.9	novel	3067	7	NA	NA	414	-103	intron_retention	FALSE	non_canonical	0	0	junction_1	62.9399714013281	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	False	NA	-28	True	NA	NA	NA	120251823	120226826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120229543_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684
ES.10118.5	chr13	-	3384	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-317	0	-233	0	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252658	120226722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ES.10118.7	chr13	-	3273	8	NIC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	-265	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	54.2684182972914	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252690	120226722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ES.10118.8	chr13	-	3315	7	NIC	ENSMUSG00000094870.9	novel	3067	7	NA	NA	26	0	intron_retention	FALSE	canonical	3	47	junction_6	45.1568254961405	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252315	120226722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ES.10119.1	chr13	-	1113	2	Intergenic	novelGene_8485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATTTGTGTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120368886	120367251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_120368181_120368702
ES.1012.1	chr1	+	3551	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-122	422	-108	80	multi-exon	TRUE	canonical	3	84	junction_2	27.1317771871533	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTGTCCAGAAAAA	4142	False	NA	112	True	TATAAA	-23	NA	91072702	91098095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.10	chr1	+	3901	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.6793565078906	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4218	False	NA	12	True	AATAAA	-18	NA	91072778	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084759_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.11	chr1	+	3111	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-31	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	48.0025886875912	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTACTCAAGACTCCA	4219	False	NA	24	True	ATTAAA	-40	NA	91072779	91098007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.12	chr1	+	3289	14	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-29	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.0779928582064	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	4221	False	NA	22	True	ATTAAA	-38	NA	91072781	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084584_91084785_91084871_91090079_91090195_91090775_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.13	chr1	+	5073	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-29	1	intron_retention	FALSE	canonical	3	84	junction_2	27.9297512684442	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4221	False	NA	12	True	AATAAA	-18	NA	91072781	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.14	chr1	+	3897	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-43	-3	-29	3	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGTGCTTTCTGTAGT	4221	False	NA	14	True	AATAAA	-20	NA	91072781	91098520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.16	chr1	+	3671	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-24	-127	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTACTTTTCAGATG	4226	False	NA	NA	False	NA	NA	NA	91072786	91098390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.17	chr1	+	3797	14	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.2980147092204	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4227	False	NA	12	True	AATAAA	-18	NA	91072787	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084763_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.18	chr1	+	7404	10	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	84	junction_2	24.7521042876493	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGACTCCAAGCTGTAT	4227	False	NA	32	True	TATAAA	-20	NA	91072787	91098015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520
ES.1012.19	chr1	+	5865	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-37	-1977	-23	1977	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTTACTTAAGTTCT	4227	False	NA	NA	False	NA	NA	NA	91072787	91100494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.2	chr1	+	3396	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-39	85	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTCCAGAAAAAGTTTA	4211	False	NA	117	True	TATAAA	-28	NA	91072771	91098100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.20	chr1	+	4730	13	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-20	46	intron_retention	FALSE	canonical	3	84	junction_2	29.0156806265547	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTTATAAATCATCATT	4230	False	NA	78	True	TTTAAA	-15	NA	91072790	91098061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.22	chr1	+	4841	14	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	8	junction_10	46.3168914961898	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCACTCCAGTGCTTTC	4249	False	NA	8	True	AATAAA	-14	NA	91072809	91098514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094550_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.23	chr1	+	4037	17	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.8832824713317	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4250	False	NA	12	True	AATAAA	-18	NA	91072810	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91073691_91073863_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.24	chr1	+	6272	13	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	84	junction_2	29.0635080470338	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGACTCCAAGCTGTA	4251	False	NA	31	True	TATAAA	-19	NA	91072811	91098014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.25	chr1	+	3053	13	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	49.958037947417	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	4252	False	NA	22	True	ATTAAA	-38	NA	91072812	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.26	chr1	+	3847	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	2	-4	intron_retention	FALSE	canonical	3	55	junction_1	31.9720662102323	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCACTCCAGTGCTTT	4252	False	NA	7	True	AATAAA	-13	NA	91072812	91098513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.27	chr1	+	4947	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	2	-22	intron_retention	FALSE	canonical	3	84	junction_2	26.5588487886729	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTCATTTCAAAATTAT	4252	False	NA	10	True	ATTAAA	-26	NA	91072812	91097993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91096561_91096678_91096819_91097809
ES.1012.28	chr1	+	2214	13	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	44.1124667437928	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCACTCCAGTGCTTTC	4252	False	NA	8	True	AATAAA	-14	NA	91072812	91098514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.29	chr1	+	4281	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-12	-418	2	418	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCAGGAGTTTTGAGT	4252	False	NA	NA	False	AATATA	-18	NA	91072812	91098935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.3	chr1	+	3815	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-37	4	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4213	False	NA	15	True	AATAAA	-21	NA	91072773	91098521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.30	chr1	+	2989	13	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	44.0999496094446	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCAAGCTGTATTTTGA	4252	False	NA	37	True	TATAAA	-25	NA	91072812	91098020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91097809
ES.1012.31	chr1	+	3610	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	4	-44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.0568210934143	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGATGCCTTTGTGT	4254	False	NA	-33	True	NA	NA	NA	91072814	91098473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.32	chr1	+	3356	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8913583771598	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGACTCCAAGCTGTAT	4254	False	NA	32	True	TATAAA	-20	NA	91072814	91098015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077806_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084763_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.33	chr1	+	3746	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.5185940440673	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTCCAGTGCTTTCTG	4254	False	NA	10	True	AATAAA	-16	NA	91072814	91098516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083255_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.34	chr1	+	4533	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	84	junction_2	27.9297512684442	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGACTCCAAGCTGTA	4257	False	NA	31	True	TATAAA	-19	NA	91072817	91098014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.35	chr1	+	4262	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-2	-6	intron_retention	FALSE	canonical	0	0	junction_2	46.5185940440673	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTACTCAAGACTCCAAG	4260	False	NA	26	True	ATTAAA	-42	NA	91072820	91098009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91079965_91080057_91081383_91081615_91081675_91083106_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.36	chr1	+	4537	12	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-1	-25	intron_retention	FALSE	canonical	3	55	junction_1	33.4503455861776	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAACTTCATTTCAAAAT	4261	False	NA	7	True	ATTAAA	-23	NA	91072821	91097990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.37	chr1	+	4359	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	55	junction_1	30.8032504240444	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGACTCCAAGCTGTA	4261	False	NA	31	True	TATAAA	-19	NA	91072821	91098014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.38	chr1	+	3696	16	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.1611179157639	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4261	False	NA	15	True	AATAAA	-21	NA	91072821	91098521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083146_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094550_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.39	chr1	+	4626	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	1	100	intron_retention	FALSE	canonical	3	84	junction_2	27.9297512684442	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGCCACTATTTCAA	4265	False	NA	132	True	TATAAA	-43	NA	91072825	91098115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.4	chr1	+	6299	12	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-37	-10	intron_retention	FALSE	canonical	3	84	junction_2	28.645453102911	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	4213	False	NA	22	True	ATTAAA	-38	NA	91072773	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91096561_91096678_91096819_91097809
ES.1012.40	chr1	+	5053	12	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	9	1	intron_retention	FALSE	canonical	3	55	junction_1	33.4503455861776	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4273	False	NA	12	True	AATAAA	-18	NA	91072833	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.41	chr1	+	6656	11	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	9	1	intron_retention	FALSE	canonical	3	55	junction_1	31.0523751104485	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4273	False	NA	12	True	AATAAA	-18	NA	91072833	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91096819_91097809
ES.1012.42	chr1	+	3316	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	9	526	9	-24	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACTTCATTTCAAAATT	4273	False	NA	8	True	ATTAAA	-24	NA	91072833	91097991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.43	chr1	+	3718	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_11	44.965746600573	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCACTCCAGTGCTTTC	4273	False	NA	8	True	AATAAA	-14	NA	91072833	91098514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094550_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.44	chr1	+	3405	17	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	9	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.8832824713317	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	4273	False	NA	22	True	ATTAAA	-38	NA	91072833	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077195_91077271_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.46	chr1	+	3619	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	48.1672382458937	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCCAGTGCTTTCTGT	4276	False	NA	11	True	AATAAA	-17	NA	91072836	91098517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.47	chr1	+	6671	10	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	7062	-10	intron_retention	FALSE	canonical	3	98	junction_2	22.2998643632037	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	6184	False	NA	22	True	ATTAAA	-38	NA	91079886	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.49	chr1	+	2421	14	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	7799	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.3018851141364	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	6921	False	NA	22	True	ATTAAA	-38	NA	91080623	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91081383_91081615_91081675_91083106_91083255_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.5	chr1	+	3265	16	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.1537818607928	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAAGACTCCAAGCTGT	4214	False	NA	30	True	TATAAA	-18	NA	91072774	91098013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083146_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.50	chr1	+	3830	8	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	11090	-10	intron_retention	FALSE	canonical	3	131	junction_2	15.1253267800759	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	429	False	NA	22	True	ATTAAA	-38	NA	91083914	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91084663_91084785_91084871_91090079_91090195_91090773_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.51	chr1	+	5161	3	ISM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	18344	454	-5182	48	intron_retention	FALSE	canonical	3	146	junction_1	1.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTATAAATCATCATTAA	7683	False	NA	80	True	TTTAAA	-17	NA	91091168	91098063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91092716_91092816_91092888_91094520
ES.1012.6	chr1	+	3770	16	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.1537818607928	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGTGCTTTCTGTA	4214	False	NA	12	True	AATAAA	-18	NA	91072774	91098518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083146_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.7	chr1	+	3281	15	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-33	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.9953615854862	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTACTCAAGACTC	4217	False	NA	22	True	ATTAAA	-38	NA	91072777	91098005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084352_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.8	chr1	+	3872	16	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	-33	4	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	41.5785200955173	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGCTTTCTGTAGTG	4217	False	NA	15	True	AATAAA	-21	NA	91072777	91098521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094550_91094807_91096414_91096561_91096678_91096819_91097809
ES.1012.9	chr1	+	4204	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	-46	-307	-32	307	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTAGTCATTTGTTTC	4218	False	NA	NA	False	AATATA	-17	NA	91072778	91098824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ES.10120.1	chr13	-	908	2	NNC	ENSMUSG00000096175.4	novel	1374	3	NA	NA	-738	61	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGTTCTTCTTAAA	NA	False	NA	-2	True	AATAAA	-16	NA	120375026	120373569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_120374317_120374865
ES.10121.1	chr13	+	3486	1	Intergenic	novelGene_8486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGTGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	120438178	120441664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_120438200_120441700
ES.10122.1	chr13	-	171	1	Intergenic	novelGene_8487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120501302	120501131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_120501100_120501300
ES.10123.1	chr13	-	192	1	FSM	ENSMUSG00000078180.5	ENSMUST00000078729.9	472	1	325	-45	325	45	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTACTTTA	NA	False	NA	NA	False	AATATA	-16	NA	120765876	120765684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_120765700_120765900
ES.10124.1	chr14	+	3384	4	Genic_Genomic	ENSMUSG00000114877.2_ENSMUSG00000114919.2	novel	679	1	NA	NA	-19211	2384	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTTTGTATTACAAATG	NA	False	NA	NA	False	AAAAAG	-11	NA	3157964	3181558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_3158014_3158862_3159030_3177200_3177318_3178507
ES.10125.1	chr14	+	1648	7	NNC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	-34	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.5674792172546	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGCTTTGTGTCCTA	NA	False	NA	20	True	AATAAA	-32	NA	3575885	3896132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_3576112_3581246_3581431_3598151_3598203_3651056_3651132_3839261_3839398_3882697_3882846_3895304
ES.10125.2	chr14	+	1492	7	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	89.5674792172546	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3575989	3896116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_3576112_3581246_3581431_3598151_3598203_3742290_3742333_3839264_3839398_3882697_3882846_3895304
ES.10125.3	chr14	+	1777	7	NNC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	47	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	94.9656370600557	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3576097	3896116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_3576469_3581246_3581431_3598151_3598203_3651056_3651132_3839261_3839398_3882697_3882846_3895304
ES.10125.4	chr14	+	1555	7	NNC	ENSMUSG00000058317.13	novel	757	6	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.9656370600557	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTTCTGTACCAGCC	NA	False	NA	4	True	AATAAA	-16	NA	3576309	3896116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_3576469_3581246_3581431_3598151_3598203_3813012_3813081_3839264_3839398_3882697_3882846_3895304
ES.10125.5	chr14	+	6178	1	Intergenic	novelGene_8488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACTTCCCAATGACGC	NA	False	NA	NA	False	TATAAA	-23	NA	3677618	3683796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_3677600_3683800
ES.10125.6	chr14	+	1944	1	NIC	ENSMUSG00000058317.13	novel	647	5	NA	NA	-62774	-87526	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAGAGCTCACTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	3741771	3743715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_3741800_3743700
ES.10126.1	chr14	-	4445	1	Antisense	novelGene_ENSMUSG00000058317.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTAATGTAGTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	3886765	3882320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_3882300_3886800
ES.10127.1	chr14	-	2170	6	Intergenic	novelGene_8489	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	1.89736659610103	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGAGTGTGTGTGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	3922764	3913816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_3914448_3914492_3915427_3916727_3916822_3917624_3917756_3921334_3921514_3922563
ES.10127.2	chr14	-	3468	5	Intergenic	novelGene_8490	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	1.80277563773199	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTAGAGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	3922764	3913819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_3914448_3914492_3916822_3917624_3917756_3921334_3921514_3922563
ES.10127.4	chr14	-	2273	7	Intergenic	novelGene_8491	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTGTAGAGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	3922763	3913820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_3914448_3914492_3915427_3916010_3916119_3916727_3916822_3917624_3917756_3921334_3921514_3922563
ES.10127.5	chr14	-	1918	6	Intergenic	novelGene_8492	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	2.24499443206436	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	3922761	3914048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_3914448_3914492_3915427_3916727_3916818_3917637_3917756_3921334_3921514_3922563
ES.10128.1	chr14	-	178	1	Intergenic	novelGene_8493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGGTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	3932521	3932343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_3932300_3932500
ES.10129.1	chr14	+	176	1	Intergenic	novelGene_8494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAATCTCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	3994115	3994291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_3994100_3994300
ES.1013.1	chr1	+	1254	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	-134	243	-119	9	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTCTTAGCTTCTTCC	185	False	NA	NA	False	TATAAA	-15	NA	91177906	91213504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.10	chr1	+	1285	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-11	4380	7	30	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTTGTATTCATTGT	326	False	NA	NA	False	NA	NA	NA	91178047	91213679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.12	chr1	+	1164	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	21	-31	-5	-2	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGGATGCACACTCTCT	332	False	NA	NA	False	TATAAA	-4	NA	91178053	91213493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.13	chr1	+	1268	10	NIC	ENSMUSG00000034343.15	novel	1154	11	NA	NA	-5	-22	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	148.446024609022	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATTTGTAATTTGTAC	332	False	NA	NA	False	NA	NA	NA	91178053	91213627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91178160_91181481_91181550_91181981_91182116_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.14	chr1	+	1129	10	NNC	ENSMUSG00000034343.15	novel	1363	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	102.971169403844	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGCACACTCTCTTA	332	False	NA	NA	False	TATAAA	-6	NA	91178053	91213495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202940_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.15	chr1	+	4248	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-33	-3105	-5	-1459	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGACTCATTTGCTCT	332	False	NA	NA	False	CATAAA	-24	NA	91178053	91216600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.16	chr1	+	883	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-2	4773	-2	173	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGAGTTGTCTGCTTC	335	False	NA	NA	False	AATACA	-22	NA	91178056	91213286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.17	chr1	+	1299	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	24	-169	-2	-18	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAATTTGTACAATT	335	False	NA	NA	False	NA	NA	NA	91178056	91213631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.18	chr1	+	5704	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-30	-4564	-2	0	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGTGTTTTAGTTAGGA	335	False	NA	NA	False	NA	NA	NA	91178056	91218059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.19	chr1	+	5662	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	16	-4315	-2	3	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTTTTAGTTAGGATTT	335	False	NA	NA	False	NA	NA	NA	91178056	91218062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.2	chr1	+	1941	9	NIC	ENSMUSG00000034343.15	novel	1363	10	NA	NA	-103	490	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	108.195136212309	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGCCTGCCTAGCAT	201	False	NA	4	True	AATAAA	-16	NA	91177922	91214237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91178160_91181981_91182116_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.20	chr1	+	4909	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	0	745	0	-745	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGTCTCTGCTTTCCT	337	False	NA	NA	False	GATAAA	-18	NA	91178058	91217314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.22	chr1	+	4184	10	NNC	ENSMUSG00000034343.15	novel	5654	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	127.789564673749	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTTGATGCTTTAATTA	338	False	NA	NA	False	NA	NA	NA	91178059	91213645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207777_91209240_91211732_91213026
ES.1013.23	chr1	+	4021	9	NIC	ENSMUSG00000034343.15	novel	1363	10	NA	NA	2	9	intron_retention	FALSE	canonical	3	274	junction_8	30.6265305739974	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTCTTAGCTTCTTCC	339	False	NA	NA	False	TATAAA	-15	NA	91178060	91213504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91178160_91181981_91182116_91189988_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.24	chr1	+	994	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	28	132	2	-132	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAGGCTGTCTGGTGGA	339	False	NA	NA	False	NA	NA	NA	91178060	91213330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.25	chr1	+	4190	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	23	-2850	5	-1462	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTTGGACTCATTTGC	342	False	NA	NA	False	CATAAA	-21	NA	91178063	91216597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.27	chr1	+	1914	2	ISM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	28	29943	10	-9155	5prime_fragment	FALSE	canonical	3	280	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	347	False	NA	NA	False	NA	NA	NA	91178068	91183804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91178160_91181981
ES.1013.29	chr1	+	4147	9	NIC	ENSMUSG00000034343.15	novel	5654	10	NA	NA	-11	-1460	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	128.977468962606	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGACTCATTTGCTC	354	False	NA	NA	False	CATAAA	-23	NA	91178075	91216599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91178160_91181984_91182116_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.3	chr1	+	1285	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-164	-11	-103	11	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTAGCTTCTTCCAC	201	False	NA	NA	False	TATAAA	-17	NA	91177922	91213506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.30	chr1	+	4051	2	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTTGCTAACAAGAGC	NA	False	NA	NA	False	NA	NA	NA	91197372	91201764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_91197954_91198294
ES.1013.31	chr1	+	8538	1	FSM	ENSMUSG00000034343.15	ENSMUST00000185697.2	1365	1	712	-7885	712	2564	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCCCTACAAATATTCA	NA	False	NA	NA	False	NA	NA	NA	91212085	91220623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91212100_91220600
ES.1013.32	chr1	+	4011	1	Genic_Genomic	ENSMUSG00000034343.15	novel	NA	NA	NA	NA	4800	2125	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCAGACTAACTCAGGAA	1606	False	NA	NA	False	NA	NA	NA	91216173	91220184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_91216200_91220200
ES.1013.4	chr1	+	1972	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	-113	-496	-98	496	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCCTAGCATTCACAC	206	False	NA	10	True	AATAAA	-22	NA	91177927	91214243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.6	chr1	+	1422	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-130	-182	-69	28	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTTTGTATTCATT	235	False	NA	NA	False	NA	NA	NA	91177956	91213677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.7	chr1	+	1052	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	-107	165	-46	-132	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAGGCTGTCTGGTGGA	258	False	NA	NA	False	NA	NA	NA	91177979	91213330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.1013.8	chr1	+	5804	1	NIC	ENSMUSG00000034343.15	novel	639	5	NA	NA	-2	-9117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGTAAGGAAAGAAAA	317	False	NA	NA	False	NA	NA	NA	91178038	91183842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91178000_91183800
ES.1013.9	chr1	+	3415	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	-12	2251	6	2061	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGGTTGTTTTGTTTGT	325	False	NA	NA	False	NA	NA	NA	91178046	91215808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ES.10130.1	chr14	+	177	2	Antisense	novelGene_ENSMUSG00000114894.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1068	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4101266	4233698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_4101305_4233559
ES.10130.10	chr14	+	1901	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	22	-1	-16	1	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTATCTTTTATGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	4198650	4201874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ES.10130.12	chr14	+	1234	3	FSM	ENSMUSG00000012405.17	ENSMUST00000112598.9	802	3	-395	-37	8	2	multi-exon	FALSE	canonical	3	10327	junction_1	2922.5	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTGCTTAAAGGTGT	NA	False	NA	-1	True	AATAAA	-14	NA	4198674	4200733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4199418_4199652_4199790_4200379
ES.10130.13	chr14	+	873	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	10	0	10	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198676	4200736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ES.10130.15	chr14	+	966	3	NIC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	15	-1	intron_retention	FALSE	canonical	3	8735	junction_1	3718.5	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTTAAAGGTGTTA	NA	False	NA	1	True	AATAAA	-16	NA	4198681	4200735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4198738_4199235_4199790_4200379
ES.10130.17	chr14	+	748	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6686.17593745982	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTTAAAGGTGTTA	NA	False	NA	1	True	AATAAA	-16	NA	4198700	4200735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4198738_4199199_4199418_4199652_4199790_4200379
ES.10130.18	chr14	+	1958	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-20	-1136	-20	-1	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTTATCTTTTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	4198705	4201872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ES.10130.2	chr14	+	1580	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	-178	6	-178	-6	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGACCCTGCTGTGTT	NA	False	NA	18	True	AATAAA	-15	NA	4137658	4186968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ES.10130.20	chr14	+	1432	2	FSM	ENSMUSG00000012405.17	ENSMUST00000224196.2	565	2	-864	-3	-13	-2	multi-exon	FALSE	canonical	3	16172	junction_1	0	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTGCTTAAAGGTGTT	NA	False	NA	0	True	AATAAA	-15	NA	4198712	4200734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4199790_4200379
ES.10130.23	chr14	+	814	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198713	4200736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ES.10130.27	chr14	+	1946	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	71	-1134	12	-3	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTATGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	4198737	4201870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ES.10130.28	chr14	+	800	4	NNC	ENSMUSG00000012405.17	novel	883	4	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6686.17593745982	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTTAAAGGTGTTA	NA	False	NA	1	True	AATAAA	-16	NA	4198741	4200735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4198865_4199233_4199418_4199652_4199790_4200379
ES.10130.29	chr14	+	895	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	94	-106	35	106	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTGTTTCTGATGTAC	NA	False	NA	-99	True	NA	NA	NA	4198760	4200842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ES.10130.3	chr14	+	1294	6	FSM	ENSMUSG00000021774.14	ENSMUST00000225612.2	550	6	-104	-640	11	-7	multi-exon	FALSE	canonical	1	3	junction_1	122.433002086856	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGACCCTGCTGTGT	NA	False	NA	17	True	AATAAA	-14	NA	4137847	4186967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4138010_4138657_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ES.10130.30	chr14	+	1803	3	FSM	ENSMUSG00000012405.17	ENSMUST00000112598.9	802	3	164	-1165	164	-12	multi-exon	FALSE	canonical	3	10327	junction_1	2922.5	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGTGGACCTATGTT	NA	False	NA	NA	False	AATAAA	-6	NA	4199233	4201861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4199418_4199652_4199790_4200379
ES.10130.31	chr14	+	840	1	NIC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	317	2	mono-exon	FALSE	NA	NA	NA	NA	NA	841	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTGCTTAAAGGTGT	NA	False	NA	-1	True	AATAAA	-14	NA	4199893	4200733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4199900_4200700
ES.10130.32	chr14	+	2063	1	Genic_Genomic	ENSMUSG00000012405.17	novel	NA	NA	NA	NA	1902	1668	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4201478	4203541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_4201500_4203500
ES.10130.33	chr14	+	4721	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	42.8714261912695	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGTTTTGTTCT	NA	False	NA	25	True	TATAAA	-15	NA	4230545	4265639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254861_4257731_4257918_4261566_4261778_4262814
ES.10130.34	chr14	+	4686	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGTTTTGTTCTCTG	NA	False	NA	28	True	TATAAA	-18	NA	4230545	4265642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.35	chr14	+	7585	7	NIC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	101	junction_6	13.5328817658653	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230550	4265637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4257918_4261566_4261778_4262814
ES.10130.36	chr14	+	4061	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	4	598	4	-598	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATATGCCACATGTAG	NA	False	NA	NA	False	AATAAA	-33	NA	4230572	4265044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.37	chr14	+	5739	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	42.2026210618463	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230578	4265637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4255914_4257731_4257918_4261566_4261778_4262814
ES.10130.38	chr14	+	3634	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	10	1019	10	-1019	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGTGTGTCTGTCATT	NA	False	NA	NA	False	GATAAA	-22	NA	4230578	4264623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.39	chr14	+	4579	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.8714261912695	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTATTGTTTTGTTC	NA	False	NA	24	True	TATAAA	-14	NA	4230579	4265638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254754_4257731_4257918_4261566_4261778_4262814
ES.10130.4	chr14	+	2924	4	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	27	5	27	-5	intron_retention	FALSE	canonical	3	247	junction_1	33.2298393348843	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGACCCTGCTGTGTTC	NA	False	NA	19	True	AATAAA	-16	NA	4137863	4186969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427
ES.10130.40	chr14	+	4412	6	NIC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	42.8830969030922	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTGTTTTGTTCTC	NA	False	NA	26	True	TATAAA	-16	NA	4230583	4265640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4230886_4247442_4247710_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.41	chr14	+	4515	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	20	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.0912516966145	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTATTGTTTTG	NA	False	NA	21	True	TATAAA	-11	NA	4230588	4265635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247563_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.42	chr14	+	3894	5	FSM	ENSMUSG00000021775.12	ENSMUST00000143308.2	1680	5	-74	-2140	22	2140	multi-exon	FALSE	canonical	3	105	junction_4	13.5462171841441	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGGCTATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	4230590	4257300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202
ES.10130.43	chr14	+	4558	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.2744349184244	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGTTTTGTTCTCTG	NA	False	NA	28	True	TATAAA	-18	NA	4230590	4265642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247563_4247710_4249639_4249729_4252901_4253047_4254202_4254861_4257731_4257918_4261566_4261778_4262814
ES.10130.44	chr14	+	4536	7	NIC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	34	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.2022663816634	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTATTGTTTTGTTC	NA	False	NA	24	True	TATAAA	-14	NA	4230602	4265638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4230886_4247442_4247710_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.45	chr14	+	4004	7	NIC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	34	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	45.544849690534	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230602	4265637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4257731_4257918_4261566_4261778_4262814
ES.10130.46	chr14	+	4705	9	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.0843359064205	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGTTTTGTTCT	NA	False	NA	25	True	TATAAA	-15	NA	4230603	4265639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4239176_4239257_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ES.10130.47	chr14	+	4568	7	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.6322465992803	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230607	4265637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4252901_4253047_4254202_4254861_4257731_4257918_4261566_4261778_4262814
ES.10130.48	chr14	+	4459	8	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	46	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.9280366023257	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTATGAGTTTATTGT	NA	False	NA	17	True	TATAAA	-7	NA	4230614	4265631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261631_4262814
ES.10130.49	chr14	+	4785	9	NNC	ENSMUSG00000021775.12	novel	4663	8	NA	NA	46	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.9013487300667	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTTATTGTTTTGTT	NA	False	NA	23	True	TATAAA	-13	NA	4230614	4265637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262226_4262400_4262814
ES.10130.5	chr14	+	1493	6	NNC	ENSMUSG00000021774.14	novel	492	3	NA	NA	209	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.626857923349	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAACTACTGACCCTG	NA	False	NA	11	True	AATAAA	-8	NA	4138160	4186961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_4138528_4138657_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ES.10130.50	chr14	+	256	1	Intergenic	novelGene_8495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTTTAAAAGATCTGT	NA	False	NA	NA	False	AAAACA	-13	NA	4233521	4233777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_4233500_4233800
ES.10130.6	chr14	+	1291	5	NIC	ENSMUSG00000021774.14	novel	370	3	NA	NA	15	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	134.882356147867	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGACCCTGCTGTGT	NA	False	NA	17	True	AATAAA	-14	NA	4142419	4186967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4142668_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ES.10130.7	chr14	+	1267	1	Genic_Genomic	ENSMUSG00000021774.14	novel	NA	NA	NA	NA	2235	27	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCACATTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	4144639	4145906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_4144600_4145900
ES.10130.8	chr14	+	1756	1	NIC	ENSMUSG00000021774.14	novel	1408	6	NA	NA	40965	342	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAATGTAAAGA	NA	False	NA	NA	False	NA	NA	NA	4183369	4185125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_4183400_4185100
ES.10130.9	chr14	+	845	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	-59	1136	-59	1	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTAAAGGTGTTATT	NA	False	NA	3	True	AATAAA	-18	NA	4198569	4200737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ES.10131.1	chr14	-	4434	4	NNC	ENSMUSG00000021772.16	novel	4598	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	45.0653845971483	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAGTCCCAATAAGATT	NA	False	NA	NA	False	AATAAA	-22	NA	4198562	4185692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191150_4191227_4192889_4193001_4198372
ES.10131.2	chr14	-	4525	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	11	62	11	-62	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTAGTTAAATTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	4198549	4185754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ES.10131.3	chr14	-	4425	4	NNC	ENSMUSG00000021772.16	novel	4598	4	NA	NA	1	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.4494946749214	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTAGTTAAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	4198457	4185756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191150_4191387_4192889_4193001_4198372
ES.10131.4	chr14	-	4491	5	NNC	ENSMUSG00000021772.16	novel	1199	5	NA	NA	3	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.2026970199801	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGGAATGCCTAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	4198429	4185762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191150_4191393_4191758_4191853_4192889_4193001_4198372
ES.10131.5	chr14	-	1041	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	11	3546	11	20	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTGTCAGGACTCTCA	NA	False	NA	-19	True	AATAAA	-34	NA	4198549	4189238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ES.10131.6	chr14	-	5700	5	NNC	ENSMUSG00000021772.16	novel	1199	5	NA	NA	950	13	intron_retention	TRUE	non_canonical	0	0	junction_2	46.7653718043597	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCCAGCTTGTCAGG	NA	False	NA	-26	True	AATAAA	-27	NA	4197482	4189245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191150_4193593_4194052_4194224_4194429_4196515_4196984
ES.10131.7	chr14	-	2245	4	NNC	ENSMUSG00000021772.16	novel	619	4	NA	NA	12	5	intron_retention	FALSE	non_canonical	0	0	junction_2	49.5580467734555	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGGAACTCTTCCAGC	NA	False	NA	-34	True	AATAAA	-19	NA	4198446	4189253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191150_4192105_4192149_4192871_4198372
ES.10131.8	chr14	-	1160	5	NNC	ENSMUSG00000021772.16	novel	1199	5	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4497884337834	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCATGGGAACTCTTC	NA	False	NA	-38	True	AATAAA	-15	NA	4198425	4189257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4189750_4191146_4191393_4191594_4191853_4192889_4193001_4198372
ES.10132.1	chr14	-	4472	1	Intergenic	novelGene_8496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGTGAAGGTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	4247041	4242569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_4242600_4247000
ES.10133.1	chr14	-	180	1	Intergenic	novelGene_8497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4286210	4286030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_4286000_4286200
ES.10134.1	chr14	-	6130	10	NIC	ENSMUSG00000021779.20	novel	1758	10	NA	NA	-102	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGCCTGTCTCTTTC	NA	False	NA	NA	False	AATAGA	-1	NA	4809266	4431607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_4436272_4439294_4439554_4442912_4443060_4458425_4458632_4460979_4461128_4467067_4467169_4506374_4506636_4544036_4544101_4642727_4642803_4809061
ES.10134.2	chr14	-	4684	11	NNC	ENSMUSG00000021779.20	novel	4532	10	NA	NA	-39	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.916515138991168	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCATGATTCTGCTGA	NA	False	NA	NA	False	TTTAAA	-44	NA	4809203	4433120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_4436272_4439294_4439554_4442912_4443060_4458425_4458632_4460979_4461128_4467067_4467169_4506374_4506636_4544036_4544101_4642720_4642803_4656295_4656419_4809061
ES.10135.1	chr14	+	1605	2	Intergenic	novelGene_8498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	4822382	4824354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_4823033_4823399
ES.10136.1	chr14	-	88	1	Intergenic	novelGene_8499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTCTTGTGGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	5498155	5498067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_5498100_5498200
ES.10137.1	chr14	+	804	1	NIC	ENSMUSG00000017491.10	novel	2756	8	NA	NA	-23	-26244	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAAGGGTTTAATGAT	NA	False	NA	NA	False	AATAAA	-28	NA	5894196	5895000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_5894200_5895000
ES.10137.2	chr14	+	3041	8	FSM	ENSMUSG00000017491.10	ENSMUST00000063750.8	3108	8	67	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_4	0.880630571852711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTCACT	NA	False	NA	NA	False	AATAAA	-16	NA	5894286	6038924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_5894906_5921200_5921350_5960687_5960830_6025924_6026086_6032852_6033030_6034504_6034710_6035439_6035599_6037495
ES.10138.1	chr14	-	5812	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-70	4593	-70	2041	multi-exon	TRUE	canonical	3	144	junction_31	34.1687767724051	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCCATGGAAAAAGGTA	3773	False	NA	81	True	AATAAA	-21	NA	6104654	6038893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.11	chr14	-	5654	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	2	1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	54.1678720954307	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGACTCTTTACTG	3845	False	NA	-3	True	ATTAAA	-11	NA	6104582	6038977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040420_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057568_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.13	chr14	-	5252	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-50864	1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	48.2265910223048	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGACTCTTTACTG	NA	False	NA	-3	True	ATTAAA	-11	NA	6155448	6038977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6155306
ES.10138.15	chr14	-	5512	35	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-10	1957	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	48.0362554109917	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGACTCTTTACTG	3833	False	NA	-3	True	ATTAAA	-11	NA	6104594	6038977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.17	chr14	-	5253	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-50871	1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	56.2183353052169	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGACTCTTTACTG	NA	False	NA	-3	True	ATTAAA	-11	NA	6155455	6038977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040420_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6155306
ES.10138.18	chr14	-	5656	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	0	1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	48.0510272990057	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAGACTCTTTACTG	3843	False	NA	-3	True	ATTAAA	-11	NA	6104584	6038977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063028_6069262_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.21	chr14	-	5664	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-21	1954	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.5153387034199	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTCTTAGACTCTTTA	3822	False	NA	-6	True	ATTAAA	-8	NA	6104605	6038980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040414_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.23	chr14	-	2028	13	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-65	1951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.6008483102716	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTTCTTAGACTCT	NA	False	NA	-9	True	ATTAAA	-5	NA	6056111	6038983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044403_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006
ES.10138.24	chr14	-	5291	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	840	1951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	48.2265910223048	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTTCTTAGACTCT	4683	False	NA	-9	True	ATTAAA	-5	NA	6103744	6038983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6103557
ES.10138.25	chr14	-	7959	34	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-1	1951	intron_retention	TRUE	non_canonical	0	0	junction_14	48.8476201141597	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTTCTTAGACTCT	3842	False	NA	-9	True	ATTAAA	-5	NA	6104585	6038983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6059382_6059430_6059970_6060445_6060595_6060814_6060937_6062357_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.29	chr14	-	5555	35	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	2	1948	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	48.1993499503898	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAACTGTGTTCTTAGAC	3845	False	NA	-12	True	ATTAAA	-2	NA	6104582	6038986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.3	chr14	-	6541	35	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-1	1964	intron_retention	FALSE	canonical	3	144	junction_30	34.6577932038061	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTTTACTGAAGGTGA	3842	False	NA	4	True	ATTAAA	-18	NA	6104585	6038970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.33	chr14	-	6511	35	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	0	1944	intron_retention	FALSE	canonical	3	144	junction_30	33.7000302896376	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGAACTGTGTTCTT	3843	False	NA	-16	True	AATGAA	-12	NA	6104584	6038990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.34	chr14	-	5154	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	491	1944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	56.1952572622949	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGAACTGTGTTCTT	4334	False	NA	-16	True	AATGAA	-12	NA	6104093	6038990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040420_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069629_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.35	chr14	-	5497	35	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	13	1944	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	46.8957099579135	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGAACTGTGTTCTT	3856	False	NA	-16	True	AATGAA	-12	NA	6104571	6038990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.36	chr14	-	5656	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	4	1944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.2270480463537	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGAACTGTGTTCTT	3847	False	NA	-16	True	AATGAA	-12	NA	6104580	6038990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044424_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.38	chr14	-	5629	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	4	1944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	48.2312118437674	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGAACTGTGTTCTT	3847	False	NA	-16	True	AATGAA	-12	NA	6104580	6038990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069647_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.4	chr14	-	4482	23	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	9122	1959	intron_retention	FALSE	canonical	0	0	junction_10	54.9122703775443	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	NA	False	NA	-1	True	ATTAAA	-13	NA	6071064	6038975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998
ES.10138.41	chr14	-	5486	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	9	4840	9	1794	multi-exon	FALSE	canonical	3	144	junction_31	34.1687767724051	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTATGCTCTTTTT	3852	False	NA	NA	False	NA	NA	NA	6104575	6039140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.42	chr14	-	5372	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-2	4965	-2	1669	multi-exon	FALSE	canonical	3	144	junction_31	34.1687767724051	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGTGTTGTCCTTTGT	3841	False	NA	NA	False	NA	NA	NA	6104586	6039265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.43	chr14	-	4368	31	NIC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-2304	1664	combination_of_known_splicesites	FALSE	canonical	1	1	junction_26	50.2675066242819	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACCTTGTGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	6082490	6039270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344
ES.10138.44	chr14	-	5448	31	ISM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	-1	11951	-1	-511	5prime_fragment	FALSE	canonical	3	144	junction_26	31.6467481215158	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTGTGTTCATGTATT	3842	False	NA	NA	False	ATTAAA	-20	NA	6104585	6046251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.45	chr14	-	4674	30	ISM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	0	14481	0	-3041	5prime_fragment	FALSE	canonical	3	144	junction_25	31.2656524414916	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATACTGTTTTTTAAGA	3843	False	NA	NA	False	AATAAA	-32	NA	6104584	6048781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.46	chr14	-	3965	26	ISM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	6	18750	6	3	5prime_fragment	FALSE	canonical	3	144	junction_21	30.486298561813	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAACATTTGTGGGTTA	3849	False	NA	NA	False	ATTAAA	-16	NA	6104578	6053050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.47	chr14	-	8949	1	Intergenic	novelGene_8500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCCCCCCCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6096727	6087778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_6087800_6096700
ES.10138.48	chr14	-	1444	4	Antisense	novelGene_ENSMUSG00000114243.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTATGTATA	NA	False	NA	NA	False	TTTAAA	-37	NA	6155448	6106573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_6107115_6109855_6110307_6110832_6111143_6155306
ES.10138.49	chr14	-	1172	3	Antisense	novelGene_ENSMUSG00000114243.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGTTTGTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	6155518	6109656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_6110307_6110832_6111143_6155306
ES.10138.5	chr14	-	5664	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	11	1959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.3885889993249	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	3854	False	NA	-1	True	ATTAAA	-13	NA	6104573	6038975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039480_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10138.8	chr14	-	5628	36	NNC	ENSMUSG00000017485.12	novel	10335	36	NA	NA	-1	1959	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	47.6147293280093	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	3842	False	NA	-1	True	ATTAAA	-13	NA	6104585	6038975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047109_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ES.10139.1	chr14	-	2752	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	6	177	6	-177	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTTGTATGAGAAGATT	NA	False	NA	NA	False	AATAAA	-19	NA	6220477	6158013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.10	chr14	-	1756	10	ISM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	24	17162	-23	11342	5prime_fragment	FALSE	canonical	3	46	junction_3	12.4255809412838	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATAATTGTTTTGGGTA	NA	False	NA	NA	False	NA	NA	NA	6220459	6174998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.11	chr14	-	4408	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	-40	8980	7	3334	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTCTTTCTTTTTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	6220476	6195443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.12	chr14	-	3034	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	2	10312	2	2002	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCTTGGTCCCACCGT	NA	False	NA	NA	False	ATTAAA	-28	NA	6220434	6196775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.13	chr14	-	2796	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	-1	10553	-1	1761	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGTCCTATTTTTCAGTA	NA	False	NA	NA	False	AATATA	-16	NA	6220437	6197016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.14	chr14	-	1905	4	ISM	ENSMUSG00000021785.9	ENSMUST00000153109.2	3296	5	-20	11463	-20	851	5prime_fragment	FALSE	canonical	3	70	junction_2	8.52447456836295	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTGGTTTTTTTATTG	NA	False	NA	NA	False	AATATA	-18	NA	6220456	6197926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.3	chr14	-	2139	10	NIC	ENSMUSG00000021785.9	novel	2329	11	NA	NA	8	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	23.1009593088178	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCAGTGCTTACC	NA	False	NA	-2	True	AATAAA	-19	NA	6220428	6158226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_6158905_6159271_6159450_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.4	chr14	-	2544	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	1	390	1	4	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCAGTGCTTACC	NA	False	NA	-2	True	AATAAA	-19	NA	6220482	6158226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.5	chr14	-	2484	12	NNC	ENSMUSG00000021785.9	novel	2935	12	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.4094286790572	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCAGTGCTTACC	NA	False	NA	-2	True	AATAAA	-19	NA	6220439	6158226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6158905_6159271_6159450_6175089_6175276_6178844_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.6	chr14	-	2302	11	FSM	ENSMUSG00000021785.9	ENSMUST00000224656.2	2329	11	31	-4	31	4	multi-exon	FALSE	canonical	0	0	junction_3	22.3660456943108	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCAGTGCTTACC	NA	False	NA	-2	True	AATAAA	-19	NA	6220405	6158226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.8	chr14	-	2418	12	NNC	ENSMUSG00000021785.9	novel	2935	12	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	21.1632770978566	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTTTTCAGTGCTTA	NA	False	NA	-4	True	AATAAA	-17	NA	6220427	6158228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199191_6199289_6208962_6209200_6215006_6215122_6220265
ES.10139.9	chr14	-	2188	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	35	712	-12	-318	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCAATTAAATGCTAACT	NA	False	NA	NA	False	ATTAAA	-31	NA	6220448	6158548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ES.1014.1	chr1	+	911	5	NNC	ENSMUSG00000026307.13	novel	648	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.170016581244	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGAAGTGGCCTGGG	NA	False	NA	14	True	ATTAAA	-23	NA	91226060	91248796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233044_91248257
ES.1014.10	chr1	+	2027	11	NIC	ENSMUSG00000026307.13	novel	2202	12	NA	NA	14	-18	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	27.3495886623547	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAACATGTCTGCACC	NA	False	NA	-3	True	ATTAAA	-6	NA	91226105	91248779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91226171_91228249_91228363_91230494_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ES.1014.11	chr1	+	6117	5	NIC	ENSMUSG00000026307.13	novel	2301	7	NA	NA	14	445	intron_retention	FALSE	canonical	3	66	junction_3	6.87386354243376	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-41	NA	91226105	91239497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91226171_91228249_91228363_91230490_91233177_91236035_91236164_91236372
ES.1014.12	chr1	+	3728	6	ISM	ENSMUSG00000026307.13	ENSMUST00000154045.8	819	7	23	-1951	-12	472	intron_retention	FALSE	canonical	2	3	junction_2	28.1666469427939	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTGGCATATGAAAG	NA	False	NA	NA	False	NA	NA	NA	91226113	91239524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91226171_91228249_91228363_91230494_91230592_91232995_91233177_91236035_91236164_91236372
ES.1014.13	chr1	+	168	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	91231405	91231573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_91231400_91231600
ES.1014.14	chr1	+	3361	2	ISM	ENSMUSG00000026307.13	ENSMUST00000137074.3	655	6	5436	-1930	5436	472	intron_retention	FALSE	canonical	3	69	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTGGCATATGAAAG	NA	False	NA	NA	False	NA	NA	NA	91235954	91239524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91236164_91236372
ES.1014.2	chr1	+	2217	12	NIC	ENSMUSG00000026307.13	novel	2202	12	NA	NA	7	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	21.6283407585266	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGGCCTGGGCTTTCT	NA	False	NA	20	True	ATTAAA	-29	NA	91226066	91248802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91226171_91228232_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ES.1014.3	chr1	+	2797	7	FSM	ENSMUSG00000026307.13	ENSMUST00000153621.8	2301	7	-24	-472	8	472	multi-exon	FALSE	canonical	3	66	junction_4	6.51707159867238	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTGGCATATGAAAG	NA	False	NA	NA	False	NA	NA	NA	91226067	91239524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518
ES.1014.4	chr1	+	2190	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	17	-5	-5	5	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGGCCTGGGCTTTCT	NA	False	NA	20	True	ATTAAA	-29	NA	91226076	91248802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ES.1014.5	chr1	+	2256	13	NIC	ENSMUSG00000026307.13	novel	2202	12	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.0846153542724	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGGCCTGGGCTTTCT	NA	False	NA	20	True	ATTAAA	-29	NA	91226076	91248802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91226171_91227125_91227192_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ES.1014.6	chr1	+	8209	4	NNC	ENSMUSG00000026307.13	novel	648	6	NA	NA	4	445	intron_retention	FALSE	canonical	0	0	junction_2	39.5979797464467	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-41	NA	91226095	91239497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91226171_91228249_91233177_91236188_91236271_91236372
ES.1014.7	chr1	+	2220	12	NNC	ENSMUSG00000026307.13	novel	2202	12	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.8858798209528	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCTGAAGTGGCCTGG	NA	False	NA	13	True	ATTAAA	-22	NA	91226097	91248795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91226229_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ES.1014.8	chr1	+	2650	6	NIC	ENSMUSG00000026307.13	novel	819	7	NA	NA	6	472	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.8223787162884	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTGGCATATGAAAG	NA	False	NA	NA	False	NA	NA	NA	91226097	91239524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91226171_91230494_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518
ES.1014.9	chr1	+	1709	6	NNC	ENSMUSG00000026307.13	novel	648	6	NA	NA	11	-1628	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.889587295316	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTGATATGGTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	91226102	91234803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91226171_91228249_91228363_91230490_91230592_91232267_91232345_91232995_91233177_91233634
ES.10140.1	chr14	+	1520	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112624.3	1586	3	-27	93	-27	-93	multi-exon	FALSE	canonical	1	1	junction_1	10	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTATATATGTAGATA	NA	False	NA	NA	False	CATAAA	-6	NA	6220561	6229124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_6220642_6226964_6227973_6228692
ES.10140.2	chr14	+	3479	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112624.3	1586	3	1	-1894	1	0	multi-exon	FALSE	canonical	1	1	junction_1	10	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATCAGCTGATTCTG	NA	False	NA	NA	False	AATAAA	-28	NA	6220589	6231111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_6220642_6226964_6227973_6228692
ES.10140.3	chr14	+	3496	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	-26	-36	-26	1	multi-exon	FALSE	canonical	3	8	junction_1	6.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCAGCTGATTCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	6226405	6231112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_6226474_6226964_6227973_6228692
ES.10140.4	chr14	+	2035	2	ISM	ENSMUSG00000021786.14	ENSMUST00000112624.3	1586	3	5831	43	-12	-43	3prime_fragment	FALSE	canonical	3	21	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGTATTTGTATAGT	NA	False	NA	NA	False	NA	NA	NA	6226419	6229174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_6227973_6228692
ES.10140.5	chr14	+	1506	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	-10	1938	-10	-79	multi-exon	FALSE	canonical	3	8	junction_1	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATATGTCTTATATCAAT	NA	False	NA	NA	False	TATAAA	-12	NA	6226421	6229138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_6226474_6226964_6227973_6228692
ES.10140.6	chr14	+	3032	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	-10	412	-10	-412	multi-exon	FALSE	canonical	3	8	junction_1	6.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGAGGATTGTTGTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	6226421	6230664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_6226474_6226964_6227973_6228692
ES.10141.1	chr14	+	158	1	Intergenic	novelGene_8501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	6517492	6517650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_6517500_6517600
ES.10142.1	chr14	+	1686	2	FSM	ENSMUSG00000045201.7	ENSMUST00000055211.6	1655	2	-32	1	-32	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAACAGTGTGCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	7030743	7112240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_7031191_7111001
ES.10143.1	chr14	+	3528	1	Antisense	novelGene_ENSMUSG00000021733.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AGTAAA	-13	NA	7749257	7752785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_7749300_7752800
ES.10144.1	chr14	+	132	1	Intergenic	novelGene_8502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAGAAATTAAATA	NA	False	NA	NA	False	NA	NA	NA	7761292	7761424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_7761300_7761400
ES.10145.1	chr14	-	7468	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	669	-5	-77	5	multi-exon	FALSE	canonical	3	66	junction_19	12.4782449576141	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGTTGTTTTTTACCT	NA	False	NA	0	True	AATAAA	-19	NA	7766815	7669817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.10	chr14	-	6930	23	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	10408	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.6098598722266	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCTGTTGTTTTTTA	NA	False	NA	-3	True	AATAAA	-16	NA	7740530	7669820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690864_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479
ES.10145.11	chr14	-	7269	24	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.2816968322565	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGGCTGTTGTTTTTT	NA	False	NA	-4	True	AATAAA	-15	NA	7766736	7669821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7697065_7697228_7698448_7698555_7702777_7703022_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.13	chr14	-	7190	26	NNC	ENSMUSG00000021733.12	novel	3723	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.210806440086	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTTGGCTGTTGTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	7766694	7669822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697096_7697208_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.15	chr14	-	7259	25	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.5662219921723	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGGCCTTGGCTGTTGTT	NA	False	NA	-8	True	AATAAA	-11	NA	7766692	7669825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694791_7696408_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.16	chr14	-	7240	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	732	160	-14	-160	multi-exon	FALSE	canonical	3	66	junction_19	12.4782449576141	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTGATATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	7766752	7669982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.17	chr14	-	7002	25	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	5	-160	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	22.5128049982424	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTGATATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	7766733	7669982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694553_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.19	chr14	-	7183	25	FSM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-50	-3470	4	-160	multi-exon	FALSE	canonical	0	0	junction_19	22.1114208172057	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTGATATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	7766734	7669982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.2	chr14	-	7361	25	FSM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-63	-3635	-9	5	multi-exon	TRUE	canonical	0	0	junction_19	22.1114208172057	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGTTGTTTTTTACCT	NA	False	NA	0	True	AATAAA	-19	NA	7766747	7669817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.20	chr14	-	7029	24	NIC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	-18	-160	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	23.0457751111259	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTGATATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	7766716	7669982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.21	chr14	-	5611	4	ISM	ENSMUSG00000021733.12	ENSMUST00000224952.3	7297	26	65939	160	-1204	-160	3prime_fragment	FALSE	canonical	3	81	junction_1	15.1730755689881	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGACCTGATATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	7685040	7669982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339
ES.10145.23	chr14	-	7062	26	NNC	ENSMUSG00000021733.12	novel	4070	26	NA	NA	1	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.2650937568203	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTGTAGACCTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	7766694	7669989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697096_7697208_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.24	chr14	-	7084	24	FSM	ENSMUSG00000021733.12	ENSMUST00000226079.3	3594	24	-27	-3463	-13	-167	multi-exon	FALSE	canonical	3	7	junction_1	21.3588477702294	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTGTAGACCTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	7766711	7669989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.25	chr14	-	7046	24	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	12	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.6829049659377	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAATTGCGATGGTATT	NA	False	NA	NA	False	AATACA	-19	NA	7766672	7670038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7694323_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.26	chr14	-	4593	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	784	2755	-2	610	multi-exon	FALSE	canonical	3	66	junction_19	12.4782449576141	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGGTGCTTGTATTT	NA	False	NA	NA	False	AGTAAA	-28	NA	7766700	7672577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.27	chr14	-	3416	19	FSM	ENSMUSG00000021733.12	ENSMUST00000225496.2	3025	19	44	-435	1	435	multi-exon	FALSE	canonical	3	66	junction_13	11.9872617575677	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATCTAGTCTGAAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	7766694	7693815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.28	chr14	-	2998	19	FSM	ENSMUSG00000021733.12	ENSMUST00000225496.2	3025	19	34	-7	-6	7	multi-exon	FALSE	canonical	3	66	junction_13	11.9872617575677	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAATCAACTTTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	7766704	7694243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.4	chr14	-	7267	24	FSM	ENSMUSG00000021733.12	ENSMUST00000226079.3	3594	24	-39	-3634	15	4	multi-exon	FALSE	canonical	3	7	junction_1	21.3588477702294	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTGTTTTTTACC	NA	False	NA	-1	True	AATAAA	-18	NA	7766723	7669818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.8	chr14	-	7685	26	NIC	ENSMUSG00000021733.12	novel	4037	26	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	28.210806440086	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTGTTTTTTACC	NA	False	NA	-1	True	AATAAA	-18	NA	7766703	7669818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726980_7727350_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10145.9	chr14	-	7265	25	NNC	ENSMUSG00000021733.12	novel	8132	25	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.5662219921723	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTGTTGTTTTTTAC	NA	False	NA	-2	True	AATAAA	-17	NA	7766746	7669819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697096_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ES.10146.1	chr14	-	2640	5	Intergenic	novelGene_8505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.707106781186548	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTAGTGTGTTTGAGG	5646	False	NA	NA	False	NA	NA	NA	7802666	7785959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788356_7788522_7799004_7799162_7799386_7799485_7801690
ES.10146.10	chr14	-	2162	1	Intergenic	novelGene_8512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7792762	7790600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7790600_7792800
ES.10146.11	chr14	-	1755	1	Intergenic	novelGene_8513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGAGGAGAGGAGAGG	5638	False	NA	NA	False	NA	NA	NA	7802674	7800919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7800900_7802700
ES.10146.12	chr14	-	180	1	Intergenic	novelGene_8514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	6301	False	NA	NA	False	NA	NA	NA	7802011	7801831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7801800_7802000
ES.10146.13	chr14	-	384	1	Intergenic	novelGene_8515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGTGTACTGGCTAAT	5718	False	NA	NA	False	AATAAA	-19	NA	7802594	7802210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7802200_7802600
ES.10146.2	chr14	-	2263	6	Intergenic	novelGene_8503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.01980390271856	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTAGTGTGTTTGAGG	5681	False	NA	NA	False	NA	NA	NA	7802631	7785959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788356_7788522_7798998_7799162_7799386_7799485_7801690_7801758_7802105
ES.10146.3	chr14	-	1823	6	Intergenic	novelGene_8504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	1.01980390271856	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTAGTGTGTTTGAGG	5667	False	NA	NA	False	NA	NA	NA	7802645	7785959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788356_7788522_7799004_7799162_7799386_7799485_7801690_7801758_7802553
ES.10146.4	chr14	-	2584	5	Intergenic	novelGene_8506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.22474487139159	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATCGAAAAAAA	5650	False	NA	NA	False	NA	NA	NA	7802662	7785983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788384_7788522_7799004_7799162_7799386_7799485_7801690
ES.10146.5	chr14	-	2444	4	Intergenic	novelGene_8507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATCGAAAAAAA	5633	False	NA	NA	False	NA	NA	NA	7802679	7785983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788384_7788522_7799386_7799485_7801690
ES.10146.6	chr14	-	1795	3	Intergenic	novelGene_8508	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTATTCATTTGTTT	5683	False	NA	NA	False	NA	NA	NA	7802629	7786484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788384_7788522_7801690
ES.10146.7	chr14	-	2090	5	Intergenic	novelGene_8510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.22474487139159	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTGTATTCATTTGT	5641	False	NA	NA	False	NA	NA	NA	7802671	7786486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788384_7788522_7799004_7799162_7799386_7799485_7801690
ES.10146.8	chr14	-	1156	5	Intergenic	novelGene_8509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTGTATTCATTTGT	5650	False	NA	NA	False	NA	NA	NA	7802662	7786486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788356_7788522_7799386_7799485_7801690_7801758_7802553
ES.10146.9	chr14	-	1935	4	Intergenic	novelGene_8511	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACCATTTTGTATTCAT	5635	False	NA	NA	False	NA	NA	NA	7802677	7786490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7787204_7788384_7788522_7799386_7799485_7801690
ES.10147.1	chr14	-	125	1	Intergenic	novelGene_8516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	7952978	7952853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_7952900_7953000
ES.10148.1	chr14	+	4303	2	Intergenic	novelGene_8517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	6872	False	NA	NA	False	NA	NA	NA	8013468	8018480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8017543_8018251
ES.10148.2	chr14	+	4074	3	Intergenic	novelGene_8518	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	12.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGCTTTGTCTTGGTTC	6878	False	NA	NA	False	NA	NA	NA	8013474	8018478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8017175_8017395_8017543_8018251
ES.10148.3	chr14	+	651	3	Intergenic	novelGene_8519	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	6879	False	NA	NA	False	NA	NA	NA	8013475	8018480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8013751_8017395_8017543_8018251
ES.10148.4	chr14	+	4144	1	Intergenic	novelGene_8520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGCTTTGTCTTGGTTC	7738	False	NA	NA	False	NA	NA	NA	8014334	8018478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8014300_8018500
ES.10149.1	chr14	+	636	2	NNC	ENSMUSG00000114883.2	novel	1104	3	NA	NA	81	-16526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCCCTGGTATTTT	4363	False	NA	NA	False	NA	NA	NA	8122579	8125233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8122621_8124638
ES.1015.1	chr1	+	2105	3	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	7407	3	7407	-3	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGCTCTGTCTGCTACA	NA	False	NA	NA	False	AATAAA	-22	NA	91286144	91290135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91286699_91287057_91287204_91288730
ES.10150.1	chr14	-	1733	9	ISM	ENSMUSG00000068758.9	ENSMUST00000224877.2	1128	10	-42	-66	-42	-1	intron_retention	FALSE	canonical	2	2	junction_8	10.2705586508232	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8123387	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8122574
ES.10150.10	chr14	-	1553	11	NNC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	10.7242715370322	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCTGTGCTGCTATCA	NA	False	NA	-1	True	AATAAA	-17	NA	8123329	8114271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574_8122970_8123250
ES.10150.2	chr14	-	1152	11	NNC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.2853887837327	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8123357	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119575_8120390_8120521_8120818_8120943_8121694_8121850_8123250
ES.10150.3	chr14	-	1272	11	FSM	ENSMUSG00000068758.9	ENSMUST00000224163.2	2315	11	524	519	65	-1	multi-exon	FALSE	canonical	3	7	junction_10	8.68849814409832	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8122647	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574
ES.10150.5	chr14	-	1433	10	NNC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	10.434983894999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8123368	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8122574_8122970_8123250
ES.10150.6	chr14	-	918	8	NIC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	12.4752816826405	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8123367	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8119495_8119729_8120390_8120521_8123250
ES.10150.7	chr14	-	1213	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	11.1664676599182	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8123330	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8122574_8122664_8123250
ES.10150.8	chr14	-	682	5	NIC	ENSMUSG00000068758.9	novel	1128	10	NA	NA	373	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	12.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTGCTGCTATCAG	NA	False	NA	0	True	AATAAA	-18	NA	8119769	8114270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8119495
ES.10151.1	chr14	+	2141	1	Antisense	novelGene_ENSMUSG00000072707.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACTAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	8136934	8139075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_8136900_8139100
ES.10152.1	chr14	+	868	1	Intergenic	novelGene_8521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	8325265	8326133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8325300_8326100
ES.10153.1	chr14	+	1463	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	12	-88	12	88	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATCTGTGTGGTCCAC	NA	False	NA	113	True	AATGAA	-22	NA	8348790	8357677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.10	chr14	+	4263	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	416.973057417676	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTAATTTTTTTTC	NA	False	NA	14	True	AATAAA	-16	NA	8348829	8357578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349025_8349570_8349769_8349846_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.12	chr14	+	3494	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	430.220541450213	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTTTAATTTTTTT	NA	False	NA	12	True	AATAAA	-14	NA	8348838	8357576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349025_8349570_8349777_8350612_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.14	chr14	+	5017	7	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	11	-10	intron_retention	FALSE	canonical	1	2	junction_2	457.196073911402	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTAATTTTTTTTCT	NA	False	NA	15	True	AATAAA	-17	NA	8348840	8357579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349025_8349570_8349777_8350609_8352939_8353159_8353380_8353506_8353616_8355471_8357238_8357376
ES.10153.2	chr14	+	1879	7	NIC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-9	-12	intron_retention	FALSE	canonical	3	1215	junction_2	21.7025344142107	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTAATTTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	8348820	8357577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.3	chr14	+	4826	7	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	38	junction_1	448.406344736557	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTTCTTAAACAT	NA	False	NA	22	True	AATAAA	-24	NA	8348820	8357586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349769_8349846_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.4	chr14	+	3781	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-3	-12	intron_retention	FALSE	canonical	0	0	junction_3	610.022716204663	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTAATTTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	8348826	8357577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349045_8349570_8349769_8349846_8350544_8351268_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.6	chr14	+	1347	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	432.626812834888	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTAATTTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	8348826	8357577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8349045_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.7	chr14	+	1290	8	NNC	ENSMUSG00000021737.5	novel	1387	8	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	429.131348523636	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTAATTTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	8348826	8357577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8348988_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10153.9	chr14	+	1324	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	50	13	-1	-13	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTTTAATTTTTTT	NA	False	NA	12	True	AATAAA	-14	NA	8348828	8357576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ES.10154.1	chr14	+	6914	1	Intergenic	novelGene_8524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCCTGGTCTACAAAG	NA	False	NA	NA	False	NA	NA	NA	8448685	8455599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8448700_8455600
ES.10155.1	chr14	+	179	1	Intergenic	novelGene_8526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGAAATCTT	NA	False	NA	NA	False	NA	NA	NA	8462649	8462828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8462600_8462800
ES.10156.1	chr14	+	1408	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	-472	1	103	1	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGTGCTCATTCAAAA	NA	False	NA	21	True	AATAAA	-15	NA	8508013	8520750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.10	chr14	+	785	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	21	131	4	7	multi-exon	FALSE	canonical	3	370	junction_1	118.776758531907	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGTCGTTCATATT	NA	False	NA	NA	False	NA	NA	NA	8508506	8520620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.11	chr14	+	1900	7	FSM	ENSMUSG00000053453.10	ENSMUST00000223832.2	1918	7	16	2	-10	-2	multi-exon	FALSE	canonical	3	370	junction_1	120.431169830184	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTGTGCTCATTCA	NA	False	NA	18	True	AATAAA	-12	NA	8508518	8520747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8508579_8515106_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.14	chr14	+	4591	8	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	67	junction_1	221.462578033824	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508554	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.15	chr14	+	864	8	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	243.518678829316	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508571	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8508594_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.16	chr14	+	986	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	149	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508751	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.2	chr14	+	1436	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	246	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	272.312292001298	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508156	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.3	chr14	+	1148	9	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	248	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.137330500695	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTTGTGCTCATTCA	NA	False	NA	18	True	AATAAA	-12	NA	8508158	8520747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8508221_8508332_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.4	chr14	+	1306	9	FSM	ENSMUSG00000053453.10	ENSMUST00000225401.2	951	9	-354	-1	283	1	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGTGCTCATTCAAAA	NA	False	NA	21	True	AATAAA	-15	NA	8508193	8520750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.5	chr14	+	1055	9	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-267	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.137330500695	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTTTGTGCTCATTCAA	NA	False	NA	19	True	AATAAA	-13	NA	8508218	8520748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8508397_8508542_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.6	chr14	+	907	9	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-197	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.692829698835	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTGTGCTCATTCAAAA	NA	False	NA	21	True	AATAAA	-15	NA	8508288	8520750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8508345_8508543_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.7	chr14	+	909	9	NNC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.137330500695	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508360	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8508390_8508540_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.8	chr14	+	894	8	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_2	184.198207352397	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508499	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10156.9	chr14	+	1071	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508501	8520749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ES.10157.1	chr14	-	6793	13	NNC	ENSMUSG00000021738.6	novel	2954	13	NA	NA	-666	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.6421930087218	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGCCTTGTCTAG	NA	False	NA	NA	False	AATAAA	-34	NA	8508989	8362446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8474667_8474757_8508892
ES.10157.10	chr14	-	6071	8	NIC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	-30	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.5675668622325	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTGCTTTATGAG	NA	False	NA	NA	False	AATAAA	-27	NA	8456649	8362529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8382230_8382481_8416739_8416845_8456393
ES.10157.11	chr14	-	7163	12	NNC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	-153	-77	intron_retention	FALSE	canonical	0	0	junction_7	9.8080756067354	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAAGTTGTGTTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	8457425	8362537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380405_8382230_8382481_8383670_8383746_8416739_8416845_8456107_8456177_8456393
ES.10157.12	chr14	-	6214	9	NNC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	-19715	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.88095013307406	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAAAGTTGTGTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	8402009	8362538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8401839
ES.10157.13	chr14	-	6397	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	193	263	193	-263	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTAGTTTGATCCATG	NA	False	NA	NA	False	ATTAAA	-22	NA	8457079	8362723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10157.15	chr14	-	5452	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	120	1281	120	-1281	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGAAGTGGTTCACT	NA	False	NA	NA	False	AATAAA	-16	NA	8457152	8363741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10157.16	chr14	-	2514	1	Intergenic	novelGene_8522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTGTGTGTAG	NA	False	NA	NA	False	TATAAA	-27	NA	8410807	8408293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8408300_8410800
ES.10157.17	chr14	-	157	1	Intergenic	novelGene_8523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	8428314	8428157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8428200_8428300
ES.10157.18	chr14	-	175	1	Intergenic	novelGene_8525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	8461914	8461739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8461700_8461900
ES.10157.19	chr14	-	351	1	Intergenic	novelGene_8527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	8470498	8470147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8470100_8470500
ES.10157.2	chr14	-	6747	13	NNC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	193	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.46397595039641	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTTTCTGCCTTGTCT	NA	False	NA	NA	False	AATAAA	-32	NA	8457079	8362448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8383670_8383746_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10157.20	chr14	-	195	1	Intergenic	novelGene_8528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGGTAAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	8470501	8470306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8470300_8470500
ES.10157.3	chr14	-	7344	12	ISM	ENSMUSG00000021738.6	ENSMUST00000223714.2	2954	13	17382	-3795	-102	0	3prime_fragment	TRUE	canonical	1	2	junction_2	8.54158519748825	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTGGCTGCATGCGTT	NA	False	NA	NA	False	AATAAA	-20	NA	8457374	8362460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_8366457_8368094_8368162_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393
ES.10157.6	chr14	-	6702	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	145	6	145	-6	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATACGGCTGGCTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	8457127	8362466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10157.7	chr14	-	6651	12	NNC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	194	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.99793361742646	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATACGGCTGGCTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	8457078	8362466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366455_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10157.9	chr14	-	6790	13	NNC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	208	-69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.46397595039641	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTGCTTTATGAG	NA	False	NA	NA	False	AATAAA	-27	NA	8457064	8362529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8397643_8397858_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ES.10158.1	chr14	+	2792	17	NNC	ENSMUSG00000084902.3	novel	2952	19	NA	NA	-45	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.07649861855974	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGATCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	8555239	8654568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_8555366_8564494_8564692_8570082_8570255_8572801_8572891_8597527_8597623_8601671_8601780_8603579_8603777_8605339_8605518_8607289_8607453_8608744_8608848_8624296_8624530_8638044_8638217_8639871_8640114_8641095_8641300_8644296_8644382_8645968_8646018_8654189
ES.10159.1	chr14	-	156	1	Intergenic	novelGene_8529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	8611654	8611498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8611500_8611700
ES.1016.1	chr1	+	5032	5	NIC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-54	-4	intron_retention	FALSE	canonical	3	23	junction_4	6.09815545882523	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGGCATTCTCTGTC	NA	False	NA	4	True	ATTAAA	-16	NA	91294097	91301935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91294371_91296086_91298065_91298136_91298246_91298346_91299183_91300099
ES.1016.10	chr1	+	3345	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-19	-511	-19	511	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACATTCACCAAATGAG	NA	False	NA	NA	False	NA	NA	NA	91294132	91302450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.11	chr1	+	2486	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-15	344	-15	-219	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAAAAGTATTTATTGT	NA	False	NA	NA	False	NA	NA	NA	91294136	91301595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.12	chr1	+	3098	7	NNC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	1919	-4	intron_retention	FALSE	canonical	0	0	junction_6	13.6676828890473	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGGCATTCTCTGTC	63	False	NA	4	True	ATTAAA	-16	NA	91296070	91301935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91299183_91300099_91300154_91300329
ES.1016.2	chr1	+	1526	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-44	1333	-44	-1208	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTGTCTACCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	91294107	91300606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.3	chr1	+	6531	5	NIC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-39	2327	intron_retention	FALSE	canonical	3	23	junction_4	6.29980158417708	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATATGTGTAATCTCAG	NA	False	NA	NA	False	NA	NA	NA	91294112	91304266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91294371_91296086_91296204_91297092_91298246_91298346_91299183_91300099
ES.1016.4	chr1	+	2484	7	NNC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-39	-5	intron_retention	FALSE	canonical	0	0	junction_6	13.2161517343993	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTTGGCATTCTCTGT	NA	False	NA	3	True	ATTAAA	-15	NA	91294112	91301934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91294371_91296086_91296204_91297092_91298246_91298346_91298438_91299103_91299183_91300099_91300154_91301202
ES.1016.5	chr1	+	2237	5	NNC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-38	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	13.0096118312577	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGAGTTGGCATTCTCTG	NA	False	NA	2	True	ATTAAA	-14	NA	91294113	91301933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91294266_91298164_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.6	chr1	+	1289	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-33	1559	-33	-1434	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTGGCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91294118	91300380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.7	chr1	+	2840	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	-28	3	-28	-3	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGCATTCTCTGTCT	NA	False	NA	5	True	ATTAAA	-17	NA	91294123	91301936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ES.1016.8	chr1	+	3235	7	NIC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-26	-6	intron_retention	FALSE	canonical	1	1	junction_6	12.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGAGTTGGCATTCTCTG	NA	False	NA	2	True	ATTAAA	-14	NA	91294125	91301933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91294371_91296086_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099_91300154_91301254
ES.1016.9	chr1	+	4108	6	NIC	ENSMUSG00000047443.15	novel	2815	8	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	23	junction_5	5.65685424949238	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGGCATTCTCTGTC	NA	False	NA	4	True	ATTAAA	-16	NA	91294132	91301935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91294371_91296086_91296204_91297092_91298065_91298136_91298246_91298346_91299183_91300099
ES.10160.1	chr14	-	6515	2	Intergenic	novelGene_8530	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACCTGAACCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	8828753	8822032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8828263_8828468
ES.10160.2	chr14	-	7236	2	Intergenic	novelGene_8531	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8829499	8822059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_8829118_8829321
ES.10161.1	chr14	+	2602	1	Intergenic	novelGene_8532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTTGCATTGCTATTT	NA	False	NA	NA	False	NA	NA	NA	8830742	8833344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_8830700_8833300
ES.10162.1	chr14	+	5214	7	NNC	ENSMUSG00000054423.15	novel	7857	29	NA	NA	114	-46787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.46249406456535	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAGCTTTTGGACCC	NA	False	NA	NA	False	AATAAA	-14	NA	9646831	9886903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9883201
ES.10162.2	chr14	+	1150	3	ISM	ENSMUSG00000054423.15	ENSMUST00000067491.14	5421	29	147	332818	147	-169331	5prime_fragment	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAAAGATTGACTATT	NA	False	NA	NA	False	TATAAA	-19	NA	9646864	9764359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_9647460_9754367_9754482_9763918
ES.10162.3	chr14	+	5141	28	NIC	ENSMUSG00000054423.15	novel	5421	29	NA	NA	152	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.11234499390231	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTGTGTGTGTGA	NA	False	NA	5	True	AATAAA	-17	NA	9646869	10097196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960668_9963791_9963980_9977899_9978002_9980222_9980287_9980658_9980783_9983169_9983239_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10093053_10093159_10095969
ES.10162.4	chr14	+	3763	27	NNC	ENSMUSG00000054423.15	novel	5421	29	NA	NA	607	23773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.10137085102126	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACGTGTTAGAACTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	9647324	10058673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960667_9963791_9963980_9966354_9966514_9977899_9978002_9980222_9980287_9980658_9980783_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10058353
ES.10162.5	chr14	+	133	1	Intergenic	novelGene_8533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGCAGACTG	NA	False	NA	NA	False	NA	NA	NA	9671631	9671764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_9671600_9671800
ES.10163.1	chr14	+	181	1	Intergenic	novelGene_8534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAGAATTAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	10109412	10109593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10109400_10109600
ES.10164.1	chr14	-	2462	6	FSM	ENSMUSG00000033111.17	ENSMUST00000112669.10	2477	6	15	0	-2	0	multi-exon	FALSE	canonical	3	8	junction_2	65.4785461048121	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	10185539	10166531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10169980_10170042_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.12	chr14	-	683	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	62	1707	0	54	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTATGTGTGCTTAAAA	NA	False	NA	NA	False	ATTAAA	-3	NA	10185528	10168238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.13	chr14	-	517	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	50	1885	1	-2	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGAAGTTTCATTTTGT	NA	False	NA	NA	False	TATAAA	-28	NA	10185540	10168416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.2	chr14	-	2379	5	NIC	ENSMUSG00000033111.17	novel	2452	5	NA	NA	140	13	intron_retention	FALSE	canonical	1	6	junction_4	62.3232500757141	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTGTTTTCTTTCTCC	NA	False	NA	5	True	AATACA	-32	NA	10185322	10166626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185215
ES.10164.3	chr14	-	2295	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	3	-6	-1	6	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAAGCTTTGTGTTTTC	NA	False	NA	-2	True	AATACA	-25	NA	10185538	10166633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
ES.10164.4	chr14	-	2291	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	50	103	3	5	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAAAGCTTTGTGTTTT	NA	False	NA	-3	True	AATACA	-24	NA	10185459	10166634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
ES.10164.5	chr14	-	1692	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	60	700	1	-306	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGATGACAATTTCATC	NA	False	NA	NA	False	AATAAA	-15	NA	10185530	10167231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.6	chr14	-	909	7	NNC	ENSMUSG00000033111.17	novel	809	6	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	62.9885351119992	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAGTCTCCAGTTCC	NA	False	NA	-1	True	AATAAA	-25	NA	10185530	10167776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_10168192_10168274_10168362_10168516_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.7	chr14	-	1147	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	60	1245	1	1	multi-exon	FALSE	canonical	3	65	junction_4	38.2295697072306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAGTCTCCAGTTCC	NA	False	NA	-1	True	AATAAA	-25	NA	10185530	10167776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ES.10164.8	chr14	-	1189	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	2	1253	-2	-1	multi-exon	FALSE	canonical	3	13	junction_4	59.4011784394889	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGCCCTCTTGAGTCT	NA	False	NA	-9	True	AATAAA	-17	NA	10185507	10167784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
ES.10165.1	chr14	+	8206	1	Intergenic	novelGene_8544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCCTGGTGGCGCACA	NA	False	NA	NA	False	NA	NA	NA	10415534	10423740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10415500_10423700
ES.10166.1	chr14	+	2083	3	Intergenic	novelGene_8545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACTGTCTCCATGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	10507078	10518745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10507223_10515194_10515292_10516903
ES.10167.1	chr14	+	619	1	Intergenic	novelGene_8546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	10650969	10651588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10651000_10651600
ES.10167.2	chr14	+	786	1	Intergenic	novelGene_8547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	10650969	10651755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10651000_10651800
ES.10168.1	chr14	+	5588	1	Antisense	novelGene_ENSMUSG00000114310.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	10696177	10701765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_10696200_10701800
ES.10169.1	chr14	+	4416	1	Intergenic	novelGene_8548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAAAATACCTGGAA	NA	False	NA	NA	False	NA	NA	NA	10713293	10717709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10713300_10717700
ES.10169.2	chr14	+	4373	2	Intergenic	novelGene_8549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAAAATACCTGGAA	NA	False	NA	NA	False	NA	NA	NA	10713293	10717709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10716750_10716792
ES.1017.1	chr1	+	2707	1	Antisense	novelGene_ENSMUSG00000026309.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGCCTAAACACACGCA	NA	False	NA	NA	False	NA	NA	NA	91318902	91321609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_91318900_91321600
ES.10170.1	chr14	+	3024	1	Intergenic	novelGene_8550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGCTGCACAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	10733536	10736560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10733500_10736600
ES.10171.1	chr14	+	178	1	Intergenic	novelGene_8551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGATTTCCACCTT	NA	False	NA	NA	False	NA	NA	NA	10800773	10800951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10800800_10801000
ES.10171.2	chr14	+	178	2	Intergenic	novelGene_8552	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	10800773	10886122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10800845_10886015
ES.10171.3	chr14	+	3085	1	Intergenic	novelGene_8553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGCACACACTGTCTG	NA	False	NA	NA	False	NA	NA	NA	10848087	10851172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10848100_10851200
ES.10172.1	chr14	-	4914	1	Intergenic	novelGene_8535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCATGACTGCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	10231774	10226860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10226900_10231800
ES.10172.10	chr14	-	4074	21	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_16	11.4903220146348	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTCTACTTAAGATTGA	4610	False	NA	NA	False	AATAAA	-15	NA	10327245	10230890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194
ES.10172.11	chr14	-	4833	28	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	22.7324752743463	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAACTCTACTTAAGATT	NA	False	NA	NA	False	AATAAA	-13	NA	10507104	10230892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10231316_10231353_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040
ES.10172.12	chr14	-	5734	30	Intergenic	novelGene_8540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_27	21.9631081881455	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	1	True	AATAAA	-31	NA	10916238	10231198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877_10517058_10677309_10677398_10748553_10748659_10915440
ES.10172.13	chr14	-	4613	27	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	18.8720779312663	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGTGGACAGTGTGTG	NA	False	NA	0	True	AATAAA	-30	NA	10507153	10231199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040
ES.10172.18	chr14	-	4296	24	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_23	19.2214239325868	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTATGTGGACAGTGTG	NA	False	NA	-2	True	AATAAA	-28	NA	10362265	10231201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10362217
ES.10172.19	chr14	-	4837	24	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_23	19.2214239325868	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCTATGTGGACAGTGT	NA	False	NA	-3	True	AATAAA	-27	NA	10360818	10231202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10360228
ES.10172.2	chr14	-	6618	18	Intergenic	novelGene_8536	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_16	11.2409902407081	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATAGTATTGGGCATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	10315690	10227721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336
ES.10172.20	chr14	-	4450	25	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_24	24.0043037229207	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACAGTAGCTATGTGG	NA	False	NA	-10	True	AATAAA	-20	NA	10360351	10231209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10360228
ES.10172.21	chr14	-	4080	27	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_26	12.5460099977605	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCATTTTCTGTCT	NA	False	NA	NA	False	GATAAA	-15	NA	10516946	10231750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877
ES.10172.22	chr14	-	2563	19	Intergenic	novelGene_8541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	21.6216769372833	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTGCCATTTTCTGT	NA	False	NA	NA	False	GATAAA	-13	NA	10315579	10231752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336
ES.10172.23	chr14	-	5975	1	Intergenic	novelGene_8542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10304546	10298571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10298600_10304500
ES.10172.24	chr14	-	3474	1	Intergenic	novelGene_8543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10354673	10351199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10351200_10354700
ES.10172.25	chr14	-	2903	1	Intergenic	novelGene_8554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10891490	10888587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10888600_10891500
ES.10172.3	chr14	-	7815	27	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	18	junction_1	15.8351343312882	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATAGTATTGGGCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	10507186	10227722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10229143_10229363_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040
ES.10172.4	chr14	-	7322	24	Antisense	novelGene_ENSMUSG00000114246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	24.5190408629563	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATAGTATTGGGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	10347675	10227724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_10229145_10229366_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592
ES.10172.5	chr14	-	6077	18	Intergenic	novelGene_8537	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	21.429049261438	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATAGTATTGGGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	10302923	10227724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10230097_10230185_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885
ES.10172.8	chr14	-	4744	11	Intergenic	novelGene_8538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	9.45304183847718	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACTAATAAA	NA	False	NA	NA	False	TATAAA	-12	NA	10258151	10228582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043
ES.10172.9	chr14	-	5431	19	Intergenic	novelGene_8539	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	18	junction_1	17.4511664331225	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGAACTCATAATACTTT	NA	False	NA	NA	False	NA	NA	NA	10315841	10228838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10229143_10229363_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336
ES.10173.1	chr14	+	834	2	Intergenic	novelGene_8555	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTGTAAGCGTCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	10933544	10938505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_10933671_10937797
ES.10174.1	chr14	-	182	1	Intergenic	novelGene_8556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGTCTCTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	10953274	10953092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_10953100_10953300
ES.10175.1	chr14	+	143	1	ISM	ENSMUSG00000097148.3	ENSMUST00000181173.2	1712	4	75832	17	75832	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	11188878	11189021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_11188900_11189000
ES.10176.1	chr14	+	5676	1	Intergenic	novelGene_8557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAACCCTCACC	NA	False	NA	NA	False	NA	NA	NA	11310512	11316188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_11310500_11316200
ES.10177.1	chr14	+	176	1	Intergenic	novelGene_8558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTAGATTTA	7108	False	NA	NA	False	NA	NA	NA	11568373	11568549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_11568400_11568500
ES.10178.1	chr14	+	3764	1	Intergenic	novelGene_8559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAACCAATCATGAGCA	NA	False	NA	NA	False	NA	NA	NA	12203574	12207338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_12203600_12207300
ES.10179.1	chr14	-	118	1	Intergenic	novelGene_8560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	12215537	12215419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_12215400_12215500
ES.1018.1	chr1	-	2846	12	NIC	ENSMUSG00000026309.15	novel	2683	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	41	junction_1	137.159495743923	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTTGTTGGAAGGTAAG	NA	False	NA	-17	True	AATAAA	-22	NA	91326561	91301586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303261_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.10	chr1	-	4912	10	NNC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-1037	3	intron_retention	FALSE	canonical	0	0	junction_9	209.645085152014	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91327574	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91318386_91318830_91318920_91327068
ES.1018.12	chr1	-	1440	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_10	138.850118371937	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326551	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318830_91318920_91326372
ES.1018.13	chr1	-	1464	13	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	188.2070926459	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326468	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91325472_91325603_91326372
ES.1018.14	chr1	-	1837	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	2	3	intron_retention	FALSE	canonical	3	29	junction_8	147.522744009187	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326513	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318920_91326372
ES.1018.15	chr1	-	2442	11	NNC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-14	2	intron_retention	FALSE	canonical	2	36	junction_9	145.477455298063	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTGACTGGTCCTG	NA	False	NA	-6	True	AATAAA	-20	NA	91326551	91303550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91316187_91318328_91318386_91318830_91318920_91326372
ES.1018.16	chr1	-	1753	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-1048	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	147.929567784109	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGACTGGTCCT	NA	False	NA	-7	True	AATAAA	-19	NA	91327585	91303551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91327068
ES.1018.17	chr1	-	8070	5	NIC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-10	1	intron_retention	FALSE	canonical	3	426	junction_3	39.3382765255419	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGACTGGTCCT	NA	False	NA	-7	True	AATAAA	-19	NA	91326547	91303551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91304122_91306187_91306308_91309572_91316187_91318328_91318920_91326372
ES.1018.18	chr1	-	1371	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	147.082087610517	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326514	91303552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316072_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.2	chr1	-	2603	2	ISM	ENSMUSG00000026309.15	ENSMUST00000187231.2	780	5	6038	-2092	382	-2	3prime_fragment	FALSE	canonical	3	510	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTTGTTGGAAGGTA	NA	False	NA	-19	True	AATAAA	-20	NA	91306257	91301588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_91304122_91306187
ES.1018.20	chr1	-	3710	10	NIC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	426	junction_7	37.1274082645752	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326514	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91311114_91312286_91312381_91312961_91313069_91314936_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.21	chr1	-	6218	10	ISM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	3070	1	2987	0	intron_retention	FALSE	canonical	3	426	junction_9	41.1879162430493	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91323435	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328
ES.1018.22	chr1	-	3503	11	NNC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-9	0	intron_retention	FALSE	canonical	2	29	junction_8	195.242310988167	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326486	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91318386_91318830_91318920_91326372
ES.1018.23	chr1	-	2874	10	NIC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	426	junction_8	35.0188661674578	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326541	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91316187_91318328_91318920_91326372
ES.1018.25	chr1	-	1744	10	NIC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	5	junction_4	201.905918684916	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326512	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318920_91326372
ES.1018.26	chr1	-	4854	11	NNC	ENSMUSG00000026309.15	novel	2342	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	8	junction_10	197.772217462413	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326486	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91323091
ES.1018.27	chr1	-	1193	10	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	153.926950768342	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326541	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.28	chr1	-	1333	13	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	203.452082810671	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326441	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318705_91318754_91318853_91318920_91326372
ES.1018.29	chr1	-	4618	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	190.018398413252	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326485	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91323091
ES.1018.3	chr1	-	2391	12	NNC	ENSMUSG00000026309.15	novel	2683	12	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.377942413554	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACAGTTGTTGGAAGG	NA	False	NA	-21	True	AATAAA	-18	NA	91326462	91301590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91302919_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.30	chr1	-	1371	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_8	209.751052755955	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326514	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316169_91318328_91318386_91318830_91318920_91326372
ES.1018.31	chr1	-	4911	8	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	426	junction_6	37.3734599710019	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326496	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91313069_91314936_91315064_91316066_91316187_91318328_91318920_91326372
ES.1018.32	chr1	-	1611	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	426	junction_8	40.7165813889133	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326514	91303553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.33	chr1	-	1453	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.698888606364	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATTTGAGTGACTGGT	NA	False	NA	-10	True	AATAAA	-16	NA	91326551	91303554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303823_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318830_91318920_91326372
ES.1018.36	chr1	-	1333	13	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	911	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	231.420417686561	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATTTGAGTGACTGGT	NA	False	NA	-10	True	AATAAA	-16	NA	91325511	91303554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91311744_91311816_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318853_91318920_91325472
ES.1018.37	chr1	-	4048	11	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	4698	-4	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_8	193.085706358601	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTTATTTGAGTGACT	NA	False	NA	-13	True	AATAAA	-13	NA	91321724	91303557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318830
ES.1018.4	chr1	-	2176	12	NIC	ENSMUSG00000026309.15	novel	2683	12	NA	NA	-4	-636	combination_of_known_junctions	FALSE	canonical	2	41	junction_1	137.159495743923	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACACTGTGGGCCCA	NA	False	NA	NA	False	AATAAA	-9	NA	91326527	91302222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303261_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.5	chr1	-	1392	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGACTGGTCCTGAGT	NA	False	NA	-3	True	AATAAA	-23	NA	91326542	91303547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
ES.1018.6	chr1	-	1518	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-11	5	intron_retention	FALSE	canonical	3	85	junction_8	130.66923892026	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGACTGGTCCTGAGT	NA	False	NA	-3	True	AATAAA	-23	NA	91326433	91303547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
ES.1018.7	chr1	-	1418	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_8	186.161353633822	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326539	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316187_91318328_91318386_91318830_91318920_91326372
ES.1018.8	chr1	-	1419	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	-48	-3	-16	3	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326553	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ES.1018.9	chr1	-	1332	12	NNC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	182.344964148762	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGACTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-21	NA	91326490	91303549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316072_91316169_91318328_91318386_91318853_91318920_91326372
ES.10180.1	chr14	+	3976	2	Antisense	novelGene_ENSMUSG00000114391.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12280153	12291231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_12283906_12291007
ES.10181.1	chr14	+	2965	1	Intergenic	novelGene_8561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	12328817	12331782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_12328800_12331800
ES.10182.1	chr14	+	8726	3	Intergenic	novelGene_8562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTGTCAATAGGACAAA	NA	False	NA	NA	False	NA	NA	NA	12350938	12372333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_12351287_12357499_12361864_12368319
ES.10183.1	chr14	-	177	1	Intergenic	novelGene_8563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13262133	13261956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_13262000_13262100
ES.10184.1	chr14	+	1521	1	Intergenic	novelGene_8564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13444915	13446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_13444900_13446400
ES.10185.1	chr14	+	1210	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-182	-692	-182	692	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATATTT	NA	False	NA	NA	False	AATAAA	-32	NA	13669255	13670465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_13669300_13670500
ES.10185.2	chr14	+	967	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	-179	-452	-179	452	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAAAAAAACAATCT	NA	False	NA	NA	False	NA	NA	NA	13669258	13670225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_13669300_13670200
ES.10186.1	chr14	+	7192	1	Intergenic	novelGene_8565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTTTT	NA	False	NA	NA	False	NA	NA	NA	13719169	13726361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_13719200_13726400
ES.10187.1	chr14	+	2903	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-82	41397	-82	29832	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTTGTTAACATAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13803450	13997184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
ES.10187.10	chr14	+	3318	5	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-31	-120240	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	70.9977992616673	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTATTTCTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	13803501	13847112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345
ES.10187.11	chr14	+	6498	16	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-29	-34695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	73.291988344945	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGCCTGTTTCAAATG	NA	False	NA	NA	False	CATAAA	-37	NA	13803503	14003886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951764_13951935_13953188_13953323_13954397_13954521_13958579_13958912_13966754_13966911_13987152_13987357_13996360_13996423_13999665
ES.10187.12	chr14	+	5000	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-23	5256	-22	-5256	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAGATTCGGTGGTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	13803510	13962096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.14	chr14	+	1952	13	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-15	-8367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.4761273304023	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGGGGAATCAATTG	NA	False	NA	NA	False	ATTAAA	-11	NA	13803517	13958985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13943492_13943563_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.15	chr14	+	3553	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-15	6695	-14	-6695	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAAGACTTTCAGCTC	NA	False	NA	NA	False	AATAAA	-25	NA	13803518	13960657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.16	chr14	+	2683	4	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-14	-147680	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	75.7011668778406	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTTAAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-8	NA	13803518	13819672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13817450
ES.10187.17	chr14	+	3042	12	NIC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_11	47.6864760702655	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTTGTCAAAACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	13803518	13967352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13966754
ES.10187.18	chr14	+	2482	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-9	208	-9	-208	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTCTTAGTTGTTCA	NA	False	NA	NA	False	AATACA	-22	NA	13803523	14038373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.19	chr14	+	5729	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-9	4513	-8	-4513	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTTGGAAAATGTGC	NA	False	NA	NA	False	AAAAAG	-11	NA	13803524	13962839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.20	chr14	+	5453	13	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-6	-4897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.2581231917181	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAGGACTCTTAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	13803526	13962455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803836_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13943492_13943563_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.21	chr14	+	3409	16	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-4	-4	intron_retention	FALSE	canonical	0	0	junction_9	53.193817518789	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGAGTGCTTCCTTTT	NA	False	NA	10	True	AATAAA	-10	NA	13803528	14038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951935_13953205_13953323_13953711_13953803_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.22	chr14	+	2895	17	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	51.9798263151196	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGCTTCCTTTTGTTCA	NA	False	NA	15	True	AATAAA	-15	NA	13803531	14038582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13967735_13967948_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.23	chr14	+	3673	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-2	6562	-1	-6562	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTAATTCATCATGCA	NA	False	NA	NA	False	NA	NA	NA	13803531	13960790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.24	chr14	+	1928	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	3	8302	3	-8302	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGGTTGTTATGGTAACT	NA	False	NA	NA	False	TATAAA	-35	NA	13803536	13959050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.25	chr14	+	2278	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	3	7952	3	-7952	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCATGAATTAGAATTG	NA	False	NA	NA	False	ATTAAA	-11	NA	13803536	13959400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.26	chr14	+	3018	14	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	4	21075	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	44.1664415163031	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTGTCTGCAATCACA	NA	False	NA	NA	False	AATAAA	-21	NA	13803537	13988427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987558_13987602
ES.10187.27	chr14	+	2654	16	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	8	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	41.5753131878362	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGAGTGCTTCCTTTT	NA	False	NA	10	True	AATAAA	-10	NA	13803541	14038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891324_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.28	chr14	+	3440	11	NIC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	20	-6700	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	46.3611906663321	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAAGTGAAGACTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	13803553	13960652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_13803796_13807424_13807515_13810290_13810385_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.29	chr14	+	4216	5	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	20	-119290	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	70.9977992616673	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCTGCACCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	13803553	13848062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345
ES.10187.3	chr14	+	2751	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-49	-21	-49	21	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTGTCCTTACCACAT	NA	False	NA	35	True	AATAAA	-35	NA	13803483	14038602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.30	chr14	+	2722	17	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.606042221333	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGAGTGCTTCCTTTT	NA	False	NA	10	True	AATAAA	-10	NA	13803558	14038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13858945_13859017_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.31	chr14	+	6440	5	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	25	-117061	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	70.9977992616673	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATCCACAGTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	13803558	13850291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345
ES.10187.32	chr14	+	3103	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	29	7101	29	-7101	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTAAGTGTTGGTATTA	NA	False	NA	NA	False	NA	NA	NA	13803562	13960251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.33	chr14	+	3061	16	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	32	-31930	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	53.2015037381464	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTAGTTATTGTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	13803565	14006651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14005498_14005930_14006047
ES.10187.34	chr14	+	2292	15	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	69.8939794785426	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTGCTTCCTTTTGT	NA	False	NA	12	True	AATAAA	-12	NA	13803570	14038579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953188_13953323_13954397_13954521_13987152_13987285_13996360_13996423_14026822_14026956_14038054
ES.10187.35	chr14	+	4580	13	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	74	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.7574371611387	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGACTTGTCAAAACTT	NA	False	NA	NA	False	AATAAA	-20	NA	13803607	13967351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13964489
ES.10187.36	chr14	+	10147	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	79	7	79	-7	intron_retention	FALSE	canonical	3	126	junction_9	19.2418277168334	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCGTATTGACTTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	13803612	13967345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.37	chr14	+	2373	15	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	91	-32677	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	42.1745643433459	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAACACAAAATGC	NA	False	NA	NA	False	NA	NA	NA	13803624	14005904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14005498
ES.10187.38	chr14	+	4642	2	Intergenic	novelGene_8566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCAGAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	13835839	13840522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_13837852_13837892
ES.10187.39	chr14	+	5752	1	Intergenic	novelGene_8567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATCATGTTTTATCACA	NA	False	NA	NA	False	NA	NA	NA	13845329	13851081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_13845300_13851100
ES.10187.4	chr14	+	2250	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-48	42016	-48	29213	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGCACCTCCCAGAGTC	NA	False	NA	NA	False	CATAAA	-20	NA	13803484	13996565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
ES.10187.40	chr14	+	1997	7	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	107878	7773	107878	-7773	internal_fragment	FALSE	canonical	3	126	junction_4	7.71722460186015	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATTTGAGAAGGGT	NA	False	NA	NA	False	ACTAAA	-23	NA	13911411	13959579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.41	chr14	+	3902	3	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	149755	5028	149755	-5028	internal_fragment	FALSE	canonical	3	141	junction_1	3.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACTCACCTCTACATT	NA	False	NA	NA	False	AATAAA	-18	NA	13953288	13962324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13953323_13954397_13954521_13958579
ES.10187.42	chr14	+	888	4	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	183655	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	57.3120115391762	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTGCTTCCTTTTGT	NA	False	NA	12	True	AATAAA	-12	NA	13987188	14038579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13987357_13996360_13996423_14026822_14026956_14038054
ES.10187.5	chr14	+	2514	12	ISM	ENSMUSG00000021747.13	ENSMUST00000225744.2	2390	13	-48	7767	-47	-7767	5prime_fragment	FALSE	canonical	3	126	junction_9	19.2418277168334	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAGAAGGGTATATTT	NA	False	NA	NA	False	ACTAAA	-29	NA	13803485	13959585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579
ES.10187.6	chr14	+	3627	13	NNC	ENSMUSG00000021747.13	novel	2390	13	NA	NA	-47	-6707	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_12	58.1078379681548	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTCTGAGGAAGTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	13803485	13960645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13957406_13957460_13958579
ES.10187.7	chr14	+	2363	14	ISM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	-45	41900	-45	29329	5prime_fragment	FALSE	canonical	3	123	junction_12	20.0638035531091	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCTGTCCTGAAACTT	NA	False	NA	NA	False	NA	NA	NA	13803487	13996681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360
ES.10187.8	chr14	+	2771	17	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1361310544491	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTGCTTCCTTTTGT	NA	False	NA	12	True	AATAAA	-12	NA	13803492	14038579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345_13844398_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10187.9	chr14	+	2788	17	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.6646336965627	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTGCTTCCTTTTGT	NA	False	NA	12	True	AATAAA	-12	NA	13803493	14038579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13943492_13943563_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ES.10188.1	chr14	-	1072	6	NNC	ENSMUSG00000097898.9	novel	848	6	NA	NA	-935	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAATATAACCTGTCA	NA	False	NA	NA	False	AATATA	-4	NA	13804322	13796593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_13796943_13797365_13797435_13802001_13802328_13802761_13802839_13803792_13803940_13804218
ES.10189.1	chr14	+	2290	5	NNC	ENSMUSG00000021750.17	novel	2093	4	NA	NA	411	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCCATTGTAAGTCTG	NA	False	NA	0	True	AATAAA	-17	NA	14152160	14173494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14152269_14168539_14168715_14170106_14170264_14170975_14171975_14172643
ES.1019.1	chr1	-	1333	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	2	0	2	0	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	False	NA	-1	True	AATAAA	-35	NA	91340942	91339204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ES.1019.2	chr1	-	1552	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	4	17	4	-17	multi-exon	FALSE	canonical	3	120	junction_1	9	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGGTGTACTGTCATT	NA	False	NA	-18	True	AATAAA	-18	NA	91340940	91339221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91340525_91340614_91340702_91340778
ES.1019.3	chr1	-	1630	2	ISM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	1	19	1	-19	intron_retention	FALSE	canonical	3	120	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCCTGGTGTACTGTCA	NA	False	NA	-20	True	AATAAA	-16	NA	91340943	91339223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_91340525_91340614
ES.1019.4	chr1	-	1599	2	NIC	ENSMUSG00000067071.9	novel	1573	3	NA	NA	29	-21	intron_retention	FALSE	canonical	3	138	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCCTGGTGTACTGT	NA	False	NA	-22	True	AATAAA	-14	NA	91340901	91339225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91340702_91340778
ES.10190.1	chr14	-	178	1	Intergenic	novelGene_8568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	14163025	14162847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14162800_14163000
ES.10191.1	chr14	-	3114	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	3	-1467	3	1467	multi-exon	FALSE	canonical	3	225	junction_1	7.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAATGAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	14255630	14244742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14247587_14249552_14249623_14255430
ES.10191.10	chr14	-	1769	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-139	20	106	-18	multi-exon	FALSE	canonical	3	225	junction_1	7.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATGGAATATGAA	NA	False	NA	NA	False	AAGAAA	-6	NA	14255772	14246229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14247587_14249552_14249623_14255430
ES.10191.11	chr14	-	3243	1	NIC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	6149	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATCTAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	14249484	14246241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14246200_14249500
ES.10191.12	chr14	-	1280	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	37	333	37	-331	multi-exon	FALSE	canonical	3	225	junction_1	7.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGATGTCTTTGAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	14255596	14246542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14247587_14249552_14249623_14255430
ES.10191.13	chr14	-	7165	2	ISM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-113	406	-113	-404	intron_retention	FALSE	canonical	3	225	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTTCTGAGAACGT	NA	False	NA	NA	False	NA	NA	NA	14255746	14246615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14247587_14249552
ES.10191.2	chr14	-	4123	3	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	159	866	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	103.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTAATTAGTCATGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14255474	14245343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14247587_14249552_14249623_14253664
ES.10191.3	chr14	-	1754	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-11	-93	-11	93	multi-exon	FALSE	canonical	3	225	junction_1	7.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGATAGGGTTGAC	NA	False	NA	NA	False	ATTAAA	-12	NA	14255644	14246116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14247587_14249552_14249623_14255430
ES.10191.4	chr14	-	3160	4	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	188	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	102.088197163041	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTATTTATTGCTATAT	NA	False	NA	NA	False	AATAAA	-22	NA	14255445	14246202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14247587_14249552_14249623_14253664_14255290_14255364
ES.10191.5	chr14	-	1724	4	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	100.784699015057	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTATTTATTGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	14255600	14246205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14247587_14249552_14249623_14253664_14253768_14255430
ES.10191.6	chr14	-	7570	2	ISM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	-108	-4	-108	4	intron_retention	FALSE	canonical	3	225	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTATTTATTGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	14255741	14246205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14247587_14249552
ES.10191.7	chr14	-	3463	3	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	103.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	14255680	14246209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14247587_14249552_14249623_14253664
ES.10191.9	chr14	-	1761	4	NNC	ENSMUSG00000021752.15	novel	1650	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.066017177982	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAAGGTTGTATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	14255630	14246211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14247587_14249552_14249623_14250861_14250978_14255430
ES.10192.1	chr14	+	212	1	Intergenic	novelGene_8569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACATCCATTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	14288454	14288666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14288500_14288700
ES.10193.1	chr14	+	1472	10	NNC	ENSMUSG00000021748.10	novel	620	2	NA	NA	-3318	2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	809.329641824518	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14293429	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14293522_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.10	chr14	+	2266	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	2290	junction_4	160.750662549814	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296776	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.12	chr14	+	1501	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	785.462936548478	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296776	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298578_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.13	chr14	+	2441	1	FSM	ENSMUSG00000021748.10	ENSMUST00000225735.2	2377	1	-34	-30	-15	30	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCAAACCATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	14296776	14299217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296800_14299200
ES.10193.14	chr14	+	951	5	ISM	ENSMUSG00000021748.10	ENSMUST00000224466.2	459	6	-15	843	-15	30	5prime_fragment	FALSE	canonical	3	2463	junction_1	124.760771078092	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCAAACCATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	14296776	14299217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597
ES.10193.15	chr14	+	2510	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	2317	junction_5	168.496714677595	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296782	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.16	chr14	+	1597	11	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-7	376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	775.033263802271	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGCCCAAATTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	14296784	14304153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291_14303857_14304111
ES.10193.17	chr14	+	1175	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	100	junction_5	826.422703206416	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296797	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.19	chr14	+	617	3	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1231.5	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14296807	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14303291
ES.10193.2	chr14	+	176	1	Intergenic	novelGene_8570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14295698	14295874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14295700_14295900
ES.10193.20	chr14	+	3813	6	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-3	2	intron_retention	FALSE	canonical	3	2317	junction_3	146.911674144705	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14296807	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.21	chr14	+	1437	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	815.391945441797	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296809	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299965_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.22	chr14	+	2150	4	FSM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	63	-299	0	30	multi-exon	FALSE	canonical	3	2463	junction_1	144.03008944893	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCAAACCATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	14296810	14299217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597
ES.10193.23	chr14	+	1425	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	815.77154269841	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296810	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302941_14303061_14303291
ES.10193.25	chr14	+	3985	6	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2399	junction_4	158.83526056893	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296812	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597_14300429_14302918_14303061_14303291
ES.10193.26	chr14	+	3197	5	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	5	84	intron_retention	FALSE	non_canonical	0	0	junction_3	1117.39124191127	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACTCTGCTTTGTCTGT	NA	False	NA	71	True	NA	NA	NA	14296815	14303611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14298351_14298443_14298743_14301944_14303061_14303291
ES.10193.27	chr14	+	2236	3	ISM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	68	-299	5	30	intron_retention	FALSE	canonical	3	2463	junction_1	145	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCAAACCATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	14296815	14299217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14296883_14296955_14298351_14298443
ES.10193.28	chr14	+	605	5	ISM	ENSMUSG00000021748.10	ENSMUST00000224466.2	459	6	24	1150	5	-8	5prime_fragment	FALSE	canonical	3	2463	junction_1	124.760771078092	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	14296815	14298910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597
ES.10193.29	chr14	+	1388	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	816.93696207235	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296816	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14300007_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.3	chr14	+	1524	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	-9	-2	-9	2	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14296738	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.30	chr14	+	1716	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	72	-275	9	275	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGATTTCAGTGTGTCTT	NA	False	NA	NA	False	TATAAA	-28	NA	14296819	14304052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.31	chr14	+	1093	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	79	341	-9	-91	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCGGACTTTGAATGTAAA	NA	False	NA	NA	False	AGTAAA	-19	NA	14296826	14303436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.32	chr14	+	1426	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	52	junction_2	788.889092331742	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296826	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297004_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.33	chr14	+	1165	9	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	1067.27631585031	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296826	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298578_14298634_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.34	chr14	+	1325	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	866.32816205812	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14296826	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14300336_14300429_14302918_14303061_14303291
ES.10193.35	chr14	+	3218	7	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	17	intron_retention	FALSE	canonical	3	2290	junction_3	152.252440228574	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTGTCTGAACTGTAA	NA	False	NA	4	True	CATAAA	-18	NA	14296826	14303544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.36	chr14	+	1817	10	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	924	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1051.41743246151	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCACAGATTACATGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	14296826	14304701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299953_14300065_14300336_14300429_14302918_14303061_14303291_14303857_14304111
ES.10193.37	chr14	+	1523	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	2290	junction_5	153.567574702474	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296826	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.38	chr14	+	1419	9	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	834.7358770144	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296826	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298530_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.39	chr14	+	3358	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	2290	junction_4	182.404461993401	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296826	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.4	chr14	+	1270	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	28	215	-16	35	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTTTCAATGTGCTTA	NA	False	NA	22	True	CATAAA	-36	NA	14296775	14303562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.40	chr14	+	3451	7	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	2290	junction_3	152.252440228574	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296826	14303777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.41	chr14	+	6623	3	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	2485	junction_2	134	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296828	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14298351_14298443_14303061_14303291
ES.10193.42	chr14	+	2123	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	2290	junction_5	180.02113591187	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296828	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.43	chr14	+	1502	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	2290	junction_5	179.446327282004	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAAGTCTTGGAGTACT	NA	False	NA	NA	False	AATAAA	-13	NA	14296828	14303774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.45	chr14	+	2110	11	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-6	934	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	775.033263802271	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATGAATCTATACACAA	NA	False	NA	NA	False	AATAAA	-27	NA	14296829	14304711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291_14303857_14304111
ES.10193.46	chr14	+	3396	7	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-6	-52	intron_retention	FALSE	canonical	3	2317	junction_4	174.268391345712	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGTTGGGACTTCAC	NA	False	NA	-65	True	NA	NA	NA	14296829	14303475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.47	chr14	+	2731	7	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	2399	junction_5	149.309149827538	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296833	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14300429_14302918_14303061_14303291
ES.10193.48	chr14	+	2688	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	41	-2	intron_retention	FALSE	canonical	3	2290	junction_4	183.599497576121	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14296876	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.49	chr14	+	5165	2	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	855	-2	intron_retention	FALSE	canonical	3	2317	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14298338	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14300065_14300336
ES.10193.5	chr14	+	6787	1	FSM	ENSMUSG00000021748.10	ENSMUST00000225735.2	2377	1	-35	-4375	-16	35	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTTTCAATGTGCTTA	NA	False	NA	22	True	CATAAA	-36	NA	14296775	14303562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296800_14303600
ES.10193.50	chr14	+	3689	1	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-2590	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	615	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTCTTGGAGTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	14300086	14303775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14300100_14303800
ES.10193.51	chr14	+	650	1	Intergenic	novelGene_8571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAGGAGTATACTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	14303937	14304587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14303900_14304600
ES.10193.6	chr14	+	2369	2	ISM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	28	-299	-16	30	intron_retention	FALSE	canonical	3	2463	junction_1	0	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCCAAACCATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	14296775	14299217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14296883_14296955
ES.10193.7	chr14	+	2718	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	2290	junction_5	172.591099133182	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296775	14303777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.8	chr14	+	2407	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	28	-922	-16	922	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATCACAGATTACATGA	NA	False	NA	NA	False	AATAAA	-15	NA	14296775	14304699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ES.10193.9	chr14	+	3754	7	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	-16	2	intron_retention	FALSE	canonical	3	2317	junction_4	174.268391345712	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTTGGAGTACTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	14296775	14303779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597_14300065_14300336_14300429_14302918_14303061_14303291
ES.10194.1	chr14	+	999	1	Intergenic	novelGene_8572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAAAAGCTTGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	14376729	14377728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14376700_14377700
ES.10195.1	chr14	-	4527	18	NNC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	33.4575080406574	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTAGCTTTGCTAGGT	NA	False	NA	-1	True	AATAAA	-16	NA	14371549	14304656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14321771_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.10	chr14	-	3692	23	Fusion	ENSMUSG00000033885.16_ENSMUSG00000023156.5	novel	2840	19	NA	NA	-30	0	multi-exon	FALSE	canonical	0	0	junction_17	58.1126719797679	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTTGTAGCTTTGC	NA	False	NA	-6	True	AATAAA	-11	NA	14389436	14304661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14379280_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.11	chr14	-	3046	22	Fusion	ENSMUSG00000033885.16_ENSMUSG00000023156.5	novel	2812	18	NA	NA	27	-1	multi-exon	FALSE	canonical	2	9	junction_17	53.2403100314498	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTTGTAGCTTTG	NA	False	NA	-7	True	AATAAA	-10	NA	14389379	14304662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.12	chr14	-	2395	15	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.2361866714724	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTTGTAGCTTTG	NA	False	NA	-7	True	AATAAA	-10	NA	14371511	14304662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.13	chr14	-	2931	18	NNC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	33.5855051944965	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAAGTATGTTGTAGCTT	NA	False	NA	-9	True	AATAAA	-8	NA	14371565	14304664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347255_14347429_14349901_14349953_14371356
ES.10195.14	chr14	-	2725	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-70	110	-26	-110	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACATCAGTGTTGGTT	NA	False	NA	-116	True	AATAAA	-44	NA	14371588	14304771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.15	chr14	-	2029	1	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	27616	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACACACATCAGTGTTG	NA	False	NA	NA	False	AATAAA	-41	NA	14306803	14304774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14304800_14306800
ES.10195.17	chr14	-	2752	19	NNC	ENSMUSG00000033885.16	novel	2840	19	NA	NA	1	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.562372532033	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATTTTAAAATTCAAATA	NA	False	NA	NA	False	AATAAA	-26	NA	14371559	14304789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14312265_14312340_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.19	chr14	-	2597	18	NNC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	250	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	33.5931283136327	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATTTTAAAATTCAAATA	NA	False	NA	NA	False	AATAAA	-26	NA	14371268	14304789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371143
ES.10195.2	chr14	-	2834	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-64	-5	-20	-1	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTAGCTTTGCTAGGT	NA	False	NA	-1	True	AATAAA	-16	NA	14371582	14304656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.20	chr14	-	2859	19	NNC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	-16	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	41.4806588873465	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATTTTAAAATTCAAATA	NA	False	NA	NA	False	AATAAA	-26	NA	14371578	14304789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14348276_14348442_14349901_14349953_14371356
ES.10195.21	chr14	-	2594	17	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	-4	-134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.6381678407352	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCCATTTTAAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	14371554	14304795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14305839_14314427_14314488_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.22	chr14	-	2932	22	Fusion	ENSMUSG00000033885.16_ENSMUSG00000023156.5	novel	2840	19	NA	NA	8	-137	multi-exon	FALSE	canonical	2	9	junction_17	54.2896406265973	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAAAATCCATTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	14389398	14304798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.23	chr14	-	2153	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	-64	676	-20	-676	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAAAGCAATGGCAG	NA	False	NA	NA	False	AAGAAA	-9	NA	14371582	14305337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.24	chr14	-	5620	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-40	-3179	-40	3179	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCACCCTGCCTAGG	NA	False	NA	NA	False	AATAAA	-14	NA	14389446	14374759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.25	chr14	-	4028	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	159	1383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.4518452520232	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATTGATATTCCCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	14389247	14376555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14388857
ES.10195.26	chr14	-	3823	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-40	-1382	-40	1382	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGATTGATATTCCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	14389446	14376556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.27	chr14	-	2457	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-42	-14	-42	14	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTATGTGTGTGTGTG	NA	False	NA	-1	True	NA	NA	NA	14389448	14377924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.28	chr14	-	2415	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	8	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	91.7330910849515	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATACCTTTATGTGTGT	NA	False	NA	-6	True	NA	NA	NA	14389398	14377929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385965_14386066_14389260
ES.10195.29	chr14	-	2454	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	89.2891930750861	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTATATACCTTTA	NA	False	NA	-13	True	NA	NA	NA	14389398	14377936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14379866_14380916_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.30	chr14	-	1908	5	NIC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	-11	-417	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	100.178278583733	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTCTGTAACTTGCC	NA	False	NA	-11	True	NA	NA	NA	14389417	14378355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14389260
ES.10195.31	chr14	-	1939	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	17	445	17	-445	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAAAATGACA	NA	False	NA	-39	True	NA	NA	NA	14389389	14378383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.32	chr14	-	1374	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-20	1047	-20	233	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAGATGGCTTATCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	14389426	14378985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.33	chr14	-	1993	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	8	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	91.0046152675786	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGTGCTCTTATTA	NA	False	NA	-5	True	AATACA	-20	NA	14389398	14379193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14379866_14380975_14381228_14381550_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.34	chr14	-	1220	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	-74	1255	-74	25	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGTGCTCTTATTA	NA	False	NA	-5	True	AATACA	-20	NA	14389480	14379193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.35	chr14	-	1334	6	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	27	25	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	87.8621647809795	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGTGCTCTTATTA	NA	False	NA	-5	True	AATACA	-20	NA	14389379	14379193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389045
ES.10195.36	chr14	-	961	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	8	1432	8	-152	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGAGAGGTGGTCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	14389398	14379370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.37	chr14	-	602	4	NNC	ENSMUSG00000023156.5	novel	2401	6	NA	NA	29	-2791	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	105.894077056064	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAGTTTCCAGGTAAT	NA	False	NA	NA	False	NA	NA	NA	14389377	14382009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14382310_14385771_14385857_14385965_14386066_14389260
ES.10195.4	chr14	-	5286	16	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	-6	-3	intron_retention	FALSE	canonical	0	0	junction_1	33.7399203055108	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14371568	14304658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14305839_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.5	chr14	-	4586	1	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	25175	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14309244	14304658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14304700_14309200
ES.10195.6	chr14	-	2783	17	NIC	ENSMUSG00000033885.16	novel	2812	18	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.6869622326701	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14371596	14304658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14305839_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ES.10195.7	chr14	-	3050	20	Fusion	ENSMUSG00000033885.16_ENSMUSG00000023156.5	novel	2840	19	NA	NA	-69	-3	multi-exon	FALSE	canonical	0	0	junction_15	57.9160726236167	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14389475	14304658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10195.8	chr14	-	2946	19	NNC	ENSMUSG00000033885.16	novel	2840	19	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	42.4398266830685	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTAGCTTTGCTAG	NA	False	NA	-3	True	AATAAA	-14	NA	14371540	14304658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14348276_14348433_14349901_14349953_14371356
ES.10195.9	chr14	-	3944	23	Fusion	ENSMUSG00000033885.16_ENSMUSG00000023156.5	novel	2840	19	NA	NA	-30	0	multi-exon	FALSE	canonical	0	0	junction_17	58.1126719797679	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTTGTAGCTTTGC	NA	False	NA	-6	True	AATAAA	-11	NA	14389436	14304661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14379028_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ES.10196.1	chr14	-	1729	1	Intergenic	novelGene_8573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	14397468	14395739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14395700_14397500
ES.10197.1	chr14	+	3956	3	Antisense	novelGene_ENSMUSG00000025277.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAACAC	NA	False	NA	NA	False	NA	NA	NA	14421400	14429588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_14423427_14423605_14423732_14427784
ES.10198.1	chr14	-	3982	1	Intergenic	novelGene_8574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGGACAGCAGA	NA	False	NA	NA	False	ATTAAA	-6	NA	14412057	14408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14408100_14412100
ES.10198.10	chr14	-	1377	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	-5	854	-5	-756	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAAGTCTTCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	14466876	14413863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.11	chr14	-	1281	1	Intergenic	novelGene_8575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6841	False	NA	NA	False	NA	NA	NA	14416384	14415103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14415100_14416400
ES.10198.12	chr14	-	1800	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	45	-3035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5473354659312	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGATTGTTTTCTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	14466809	14416142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14416931_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466668
ES.10198.13	chr14	-	1518	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	1	-5761	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.1144256354789	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGACAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	14466870	14418868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14419082_14419491_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.14	chr14	-	1042	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	-4	-6126	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.7991935352745	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTAGCTAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14466875	14419233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14419339_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.2	chr14	-	4703	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	28	-2505	11	2505	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATGCTAATTAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	14466843	14410504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.3	chr14	-	2238	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	-4	-8	-4	8	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCCAGGTACTTTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	14466875	14413001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.4	chr14	-	2079	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	-15	-106	2	8	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCCAGGTACTTTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	14466869	14413001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
ES.10198.5	chr14	-	2871	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.1396101799531	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGCAACACCCAGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	14466803	14413009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466096
ES.10198.6	chr14	-	1948	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	10	0	10	0	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTGAATTCAGTGAA	NA	False	NA	NA	False	AGTAAA	-18	NA	14466844	14413107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
ES.10198.7	chr14	-	3696	9	NNC	ENSMUSG00000025277.15	novel	2226	9	NA	NA	-8	-634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.1731503789256	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGCTTCCGATG	NA	False	NA	-1	True	ATTAAA	-17	NA	14466862	14413741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14414303_14419864_14419966_14420144_14422411_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10198.8	chr14	-	1325	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	-4	637	-4	-637	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGTTGTTGCTTCCG	NA	False	NA	-4	True	ATTAAA	-14	NA	14466858	14413744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
ES.10198.9	chr14	-	1473	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	18	735	1	-637	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGTTGTTGCTTCCG	NA	False	NA	-4	True	ATTAAA	-14	NA	14466853	14413744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ES.10199.1	chr14	-	3829	2	FSM	ENSMUSG00000109649.2	ENSMUST00000211339.2	676	2	14	-3167	14	3167	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGGGTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	14512471	14505969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14509256_14511928
ES.10199.2	chr14	-	323	1	Intergenic	novelGene_8576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTAAGCTTGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	14506396	14506073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14506100_14506400
ES.10199.3	chr14	-	2834	2	FSM	ENSMUSG00000109649.2	ENSMUST00000211339.2	676	2	14	-2172	14	2172	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTCTGGCATGGTACTT	NA	False	NA	NA	False	ATTAAA	-13	NA	14512471	14506964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14509256_14511928
ES.102.1	chr1	-	158	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	12778815	12778657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_12778700_12778800
ES.1020.1	chr1	-	5834	23	FSM	ENSMUSG00000055866.10	ENSMUST00000069620.10	5833	23	-3	2	-3	-2	multi-exon	FALSE	canonical	0	0	junction_5	0.642824346533225	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATGCTTTGTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	91387049	91343705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91345743_91347096_91347248_91348127_91348321_91349089_91349277_91351411_91352209_91355460_91355701_91357105_91357271_91358495_91358603_91358699_91358863_91360529_91360615_91361117_91361244_91362343_91362453_91362738_91362893_91363371_91363479_91366055_91366135_91367608_91367752_91368553_91368606_91372306_91372509_91373222_91373345_91376429_91376585_91377534_91377601_91378326_91378566_91386894
ES.10200.1	chr14	+	1556	1	Antisense	novelGene_ENSMUSG00000025278.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	14583973	14585529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_14584000_14585500
ES.10201.1	chr14	+	179	1	Intergenic	novelGene_8579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAATCGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	14658288	14658467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14658300_14658500
ES.10202.10	chr14	-	8949	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	130.440590516606	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651759	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575946_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.16	chr14	-	12142	44	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	75	0	intron_retention	FALSE	canonical	3	255	junction_38	113.095804067979	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651741	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.2	chr14	-	7564	19	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	30544	0	intron_retention	FALSE	canonical	0	0	junction_5	142.918445621149	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14554488	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530683_14533723_14533840_14535071_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388
ES.10202.22	chr14	-	4216	21	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	31218	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	137.888578207189	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14553814	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14539852_14539981_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669
ES.10202.23	chr14	-	6449	29	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_27	132.746593791575	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651759	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565205_14602119_14602237_14651329
ES.10202.25	chr14	-	9069	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	138.241199126029	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651791	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588077_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.27	chr14	-	9035	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	138.762787198554	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651759	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576048_14576812_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.29	chr14	-	4068	20	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	32620	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	179.933490328589	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14552412	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543328_14543446_14543544_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389
ES.10202.30	chr14	-	9028	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	130.114358057977	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651759	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576048_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.31	chr14	-	7085	35	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	8145	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	145.918060738988	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14576887	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14534667_14534835_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786
ES.10202.36	chr14	-	5177	25	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	22410	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	132.408767070849	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14562622	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543418_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446
ES.10202.38	chr14	-	9266	4	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	50630	0	intron_retention	FALSE	canonical	3	557	junction_3	38.870154217457	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14534402	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14527729_14530593
ES.10202.40	chr14	-	12916	45	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	130	0	intron_retention	TRUE	non_canonical	0	0	junction_16	131.484145730626	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651686	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14548402_14548480_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.41	chr14	-	5031	25	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	21178	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	130.805596847637	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14563854	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14563797
ES.10202.44	chr14	-	9307	49	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-13547	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	156.512091297197	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14665363	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329_14651623_14652594_14652698_14662927_14663131_14665268
ES.10202.45	chr14	-	3265	7	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	50008	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	229.343992000372	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14535024	14518187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14534222_14534271
ES.10202.47	chr14	-	13878	28	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	9393	-3	intron_retention	FALSE	canonical	3	297	junction_27	104.956166956341	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14575639	14518187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515
ES.10202.49	chr14	-	5297	7	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	47443	-3	intron_retention	FALSE	canonical	3	557	junction_4	35.0844219941938	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14537589	14518187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14535210_14535792
ES.10202.5	chr14	-	9096	48	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-9483	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	147.781870380702	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14661299	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329_14651623_14652594_14652698_14661212
ES.10202.50	chr14	-	6034	28	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	11642	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_26	129.828894465502	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14573390	14518187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14567771_14567890_14573217
ES.10202.53	chr14	-	9013	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.002708364717	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTCCCTGTCATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14651759	14518187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538620_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.54	chr14	-	4768	23	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	22417	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	135.658304647503	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14562615	14518188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553748_14560003_14560165_14561088_14561252_14562446
ES.10202.55	chr14	-	8700	44	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	137.582661125992	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCCCTGTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	14651759	14518188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.57	chr14	-	4228	5	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	118874	5	52090	-5	3prime_fragment	FALSE	canonical	3	557	junction_4	35.6826288269236	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14532942	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593
ES.10202.59	chr14	-	2124	6	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	52469	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	247.863349448845	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14532563	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14532451
ES.10202.6	chr14	-	9034	45	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	69	junction_16	126.962452557849	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651822	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.60	chr14	-	3042	12	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	39443	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	172.871375295895	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14545589	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538703_14542253_14542428_14543261_14543391_14545459
ES.10202.62	chr14	-	6274	3	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57614	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	322	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14527418	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521770_14523067
ES.10202.65	chr14	-	9587	49	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-12216	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	150.070654656028	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14664032	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329_14651623_14652594_14652698_14662927_14663131_14663619
ES.10202.67	chr14	-	8930	45	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	130.03696232321	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14651813	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.68	chr14	-	7230	6	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	48432	-5	intron_retention	FALSE	canonical	3	557	junction_3	34.9685573050991	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14536600	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14519469_14521125_14521330_14523759_14527729_14530593_14530727_14533723_14533840_14535071
ES.10202.69	chr14	-	7602	38	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	53	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	135.194797640237	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14651763	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14538883_14552471_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.7	chr14	-	9002	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	129.533590667097	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651759	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585033_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.71	chr14	-	6753	13	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	41681	-5	intron_retention	FALSE	canonical	0	0	junction_6	217.713672183342	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	14543351	14518189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14534667_14534835_14535071_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261
ES.10202.79	chr14	-	8730	47	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.0342875111	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAACGCTCCCTGTCATT	NA	False	NA	NA	False	AATAAA	-11	NA	14651761	14518190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14518491_14518766_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.8	chr14	-	6292	29	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	11642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	130.375727638019	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14573390	14518184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561096_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217
ES.10202.82	chr14	-	7992	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-5	-1080	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_40	115.220754303303	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGACGTGTCCCTTCCG	NA	False	NA	-6	True	NA	NA	NA	14651821	14519264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.83	chr14	-	7962	46	FSM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	57	1081	57	-1081	multi-exon	FALSE	canonical	3	76	junction_16	125.273027256567	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGACGTGTCCCTTCC	NA	False	NA	-7	True	NA	NA	NA	14651759	14519265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.84	chr14	-	7952	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	-1082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	130.418062825328	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGGACGTGTCCCTTC	NA	False	NA	-8	True	NA	NA	NA	14651761	14519266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564414_14565044_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.85	chr14	-	4518	6	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	50677	-1083	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	249.450115253531	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGGACGTGTCCCTT	NA	False	NA	-9	True	NA	NA	NA	14534355	14519267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14533336_14533380
ES.10202.86	chr14	-	4034	7	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	45157	-13509	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	282.297370791078	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTTAACCACATTC	NA	False	NA	NA	False	AAAACA	-4	NA	14539875	14531693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14533336_14533380_14534228_14534276_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539806
ES.10202.87	chr14	-	4635	6	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	45107	-13536	intron_retention	TRUE	canonical	0	0	junction_1	269.77427601608	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	14539925	14531720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14533336_14533380_14534320_14534369_14536060_14538626_14538750_14538857_14539011_14539810
ES.10202.88	chr14	-	7272	29	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	57	30206	57	-30206	5prime_fragment	FALSE	canonical	3	255	junction_23	54.1387460746055	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	14651759	14548390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.89	chr14	-	4362	1	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	32204	-30282	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	14552828	14548466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14548500_14552800
ES.10202.90	chr14	-	7726	12	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	9839	-30351	intron_retention	FALSE	canonical	3	315	junction_10	44.2940960190945	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	TTTAAA	-36	NA	14575193	14548535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14567890_14573217_14573388_14573592_14573684_14575085
ES.10202.91	chr14	-	6184	29	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	50	31301	50	-31301	5prime_fragment	FALSE	canonical	3	255	junction_23	54.1387460746055	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGAGTTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	14651766	14549485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.92	chr14	-	4223	23	NNC	ENSMUSG00000025278.10	novel	111	3	NA	NA	57	20592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.6038019991426	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCATTTTCTGATTGTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	14651759	14561638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14561826_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.93	chr14	-	3411	18	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	25	54537	25	9509	5prime_fragment	FALSE	canonical	3	255	junction_12	33.849964094577	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTACCTTTTCTGTAC	NA	False	NA	NA	False	AATAAA	-6	NA	14651791	14572721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ES.10202.94	chr14	-	6868	2	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	-9233	-5110	intron_retention	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAATCCCTAATAAATCA	NA	False	NA	NA	False	NA	NA	NA	14594265	14587340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_14590344_14590400
ES.10202.95	chr14	-	205	1	Intergenic	novelGene_8577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTACATTTGTAATTA	NA	False	NA	NA	False	CATAAA	-10	NA	14640828	14640623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14640600_14640800
ES.10202.96	chr14	-	1906	1	Intergenic	novelGene_8578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	CATAAA	-19	NA	14644788	14642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14642900_14644800
ES.10203.1	chr14	+	2061	7	NNC	ENSMUSG00000072723.13	novel	1471	7	NA	NA	3	1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.86338998124982	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTCTGAATATGTGT	NA	False	NA	NA	False	NA	NA	NA	14678200	14714442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14678366_14679640_14679756_14698470_14698633_14703524_14703559_14704918_14704992_14712667_14712748_14713010
ES.10203.2	chr14	+	3118	12	NNC	ENSMUSG00000072723.13	novel	1296	8	NA	NA	31	1032	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.66639116180212	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCTGAATATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	14678250	14714444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14678366_14679640_14679756_14683659_14683767_14685857_14685920_14692960_14693263_14695376_14695916_14698470_14698633_14702442_14702538_14703524_14703559_14704918_14704992_14712667_14712748_14713010
ES.10204.1	chr14	+	1503	4	Intergenic	novelGene_8580	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATATTTTTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	14729114	14751678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14730315_14747796_14747953_14749311_14749355_14751574
ES.10205.1	chr14	+	2518	2	Antisense	novelGene_ENSMUSG00000114236.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	14772063	14882269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_14773596_14881283
ES.10205.10	chr14	+	5016	8	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90209	2755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4010804035633	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTACAGAGTATGGGCT	6859	False	NA	NA	False	AATAAA	-15	NA	14810997	14927377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14907121_14907273_14913640_14913739_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.11	chr14	+	2248	9	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90091	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3289775984143	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	6977	False	NA	NA	False	AATAAA	-11	NA	14811115	14924616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14913640_14913739_14917014_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.12	chr14	+	5203	8	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90040	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4010804035633	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	7028	False	NA	NA	False	AATAAA	-15	NA	14811166	14924620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14907121_14907273_14913640_14916855_14917014_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.13	chr14	+	4746	7	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90038	2754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6519180571966	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTACAGAGTATGGGC	7030	False	NA	NA	False	AATAAA	-14	NA	14811168	14927376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14907121_14907273_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.14	chr14	+	6073	6	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90026	-10	intron_retention	FALSE	canonical	0	0	junction_1	2.4	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAACACAGCAGTGTA	7042	False	NA	NA	False	AATAAA	-7	NA	14811180	14924612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14907121_14907273_14913640_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.15	chr14	+	7147	2	Genic_Genomic	ENSMUSG00000094706.9	novel	984	5	NA	NA	1301	11	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	14875481	14889167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_14875790_14882328
ES.10205.16	chr14	+	6337	6	Fusion	ENSMUSG00000091617.9_ENSMUSG00000079364.4	novel	1817	6	NA	NA	-155	-1	intron_retention	FALSE	canonical	0	0	junction_1	2.4	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTGTATGCTTCTGC	7642	False	NA	NA	False	AATAAA	-16	NA	14901051	15003410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_14901354_14985916_14986068_14992395_14996828_14997777_14997910_14998585_14998769_15002273
ES.10205.17	chr14	+	4826	7	Fusion	ENSMUSG00000096904.8_ENSMUSG00000079364.4	novel	1745	5	NA	NA	-102	-6	intron_retention	FALSE	canonical	0	0	junction_1	0.74535599249993	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	7695	False	NA	NA	False	AATAAA	-11	NA	14901104	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_14901354_15869298_15869450_16056997_16057134_16057290_16057426_16058159_16058323_16059272_16059405_16060080
ES.10205.18	chr14	+	1023	4	Fusion	ENSMUSG00000091617.9_ENSMUSG00000079364.4	novel	1817	6	NA	NA	-89	-9804	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTATTCTCCTCAAGT	7708	False	NA	NA	False	AATAAA	-24	NA	14901117	14993607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_14901354_14985916_14986068_14992395_14992494_14993069
ES.10205.19	chr14	+	10817	4	NIC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	7477	0	intron_retention	FALSE	canonical	0	0	junction_1	2.82842712474619	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	14908683	14924622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.2	chr14	+	2478	9	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90283	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3289775984143	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	6785	False	NA	NA	False	AATAAA	-11	NA	14810923	14924616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14916718_14916855_14917014_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.20	chr14	+	6036	6	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	11373	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.5601418435257	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTATGCTTCTGCGTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	14912579	14924626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14916855_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.21	chr14	+	5408	5	ISM	ENSMUSG00000079364.4	ENSMUST00000163790.2	2055	7	12146	8	12146	-8	3prime_fragment	FALSE	canonical	0	0	junction_2	24.802973612049	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	14913352	14924614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.22	chr14	+	4942	6	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	12435	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1170932428798	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	14913641	14924619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14916855_14917036_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.23	chr14	+	8074	4	ISM	ENSMUSG00000079364.4	ENSMUST00000163790.2	2055	7	12982	2	12982	-2	intron_retention	FALSE	canonical	0	0	junction_2	26.5120517668642	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	14914188	14924620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_14917147_14917878_14918042_14918991_14919124_14919799
ES.10205.25	chr14	+	4891	6	NNC	ENSMUSG00000091472.3	novel	2011	7	NA	NA	-161368	-54	intron_retention	TRUE	non_canonical	0	0	junction_1	1.2	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTGTATGCTTCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	14993355	15176071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14993470_15167066_15168805_15168856_15170446_15171398_15171531_15172205_15172389_15174936
ES.10205.26	chr14	+	1135	4	Fusion	ENSMUSG00000091472.3_ENSMUSG00000093985.8	novel	1813	6	NA	NA	152	-9308	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAGTACCAAGTTCAA	6083	False	NA	NA	False	AATAAA	-25	NA	15154875	15454350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_15154994_15156188_15156303_15447079_15447231_15453598
ES.10205.27	chr14	+	7387	5	ISM	ENSMUSG00000091472.3	ENSMUST00000165744.2	2011	7	9061	56	9061	-56	3prime_fragment	FALSE	canonical	0	0	junction_1	9.95929214352105	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	15163784	15176069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_15169551_15170282_15170446_15171398_15171531_15172205_15172389_15174926
ES.10205.28	chr14	+	5564	4	NNC	ENSMUSG00000091472.3	novel	2011	7	NA	NA	11702	-55	intron_retention	FALSE	canonical	0	0	junction_1	10.8423039781937	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	15166425	15176070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15170446_15171398_15171531_15172120_15172389_15174926
ES.10205.29	chr14	+	1878	5	NNC	ENSMUSG00000093985.8	novel	1955	7	NA	NA	-217323	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.36121593216773	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	15225000	15463655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15225176_15457868_15458032_15458981_15459114_15459704_15459973_15462515
ES.10205.3	chr14	+	825	3	Intergenic	novelGene_8582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	6811	False	NA	NA	False	AATAAA	-35	NA	14810949	14823452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_14811253_14815931_14816083_14823081
ES.10205.30	chr14	+	2560	4	NNC	ENSMUSG00000092167.9	novel	1814	6	NA	NA	-5020	-6	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	5954	False	NA	NA	False	AATAAA	-11	NA	15364131	15386559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15364401_15379821_15379985_15380934_15381924_15385420
ES.10205.31	chr14	+	1890	6	NNC	ENSMUSG00000093985.8	novel	1813	6	NA	NA	-78057	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.8	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	6089	False	NA	NA	False	AATAAA	-11	NA	15364266	15463652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15364401_15447079_15447231_15457868_15458032_15458981_15459114_15459789_15459973_15462525
ES.10205.32	chr14	+	1688	5	NNC	ENSMUSG00000093985.8	novel	1955	7	NA	NA	-78006	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	6140	False	NA	NA	False	AATAAA	-11	NA	15364317	15463652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15364401_15457868_15458032_15458981_15459114_15459789_15459973_15462525
ES.10205.33	chr14	+	1792	6	NNC	ENSMUSG00000092167.9	novel	1814	6	NA	NA	-4773	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.09918027279076	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	6201	False	NA	NA	False	AATAAA	-14	NA	15364378	15386562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15364401_15369057_15369209_15379821_15379985_15380934_15381067_15381741_15381924_15385420
ES.10205.34	chr14	+	4105	4	NIC	ENSMUSG00000094021.8	novel	984	5	NA	NA	-3247	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.54247233265651	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	15421555	15433244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_15424996_15425726_15425890_15427652_15427837_15432926
ES.10205.35	chr14	+	3150	5	FSM	ENSMUSG00000094021.8	ENSMUST00000169215.8	984	5	-2153	-13	-2153	13	multi-exon	FALSE	canonical	0	0	junction_3	8	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGTGTATGCTTCAGC	NA	False	NA	NA	False	AATAAA	-16	NA	15422649	15433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_15424996_15425726_15425890_15426844_15426977_15427652_15427837_15432926
ES.10205.36	chr14	+	1940	5	NNC	ENSMUSG00000094021.8	novel	984	5	NA	NA	-915	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.92820323027551	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	15423887	15433246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15424996_15425726_15425890_15426811_15426977_15427652_15427837_15432926
ES.10205.37	chr14	+	2052	6	NNC	ENSMUSG00000093985.8	novel	1813	6	NA	NA	-211	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.8	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	4450	False	NA	NA	False	AATAAA	-11	NA	15442112	15463652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15442409_15447079_15447231_15457868_15458032_15458981_15459114_15459789_15459973_15462525
ES.10205.38	chr14	+	1762	4	NNC	ENSMUSG00000090691.4	novel	2053	7	NA	NA	-137	-9080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.88561808316413	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAAGATATCAA	NA	False	NA	NA	False	AATATA	-34	NA	15579673	15592191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15579954_15584666_15584865_15588330_15588610_15591186
ES.10205.39	chr14	+	1469	3	NNC	ENSMUSG00000090691.4	novel	2053	7	NA	NA	-130	-9040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	15579680	15592231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15579954_15584666_15584818_15591186
ES.10205.4	chr14	+	4920	8	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90237	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.4010804035633	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	6831	False	NA	NA	False	AATAAA	-14	NA	14810969	14924619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14914393_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.40	chr14	+	1319	3	NNC	ENSMUSG00000090691.4	novel	2053	7	NA	NA	210	123802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	15580020	15725073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_15580145_15584666_15584818_15724029
ES.10205.41	chr14	+	9140	4	NIC	ENSMUSG00000091754.9	novel	1746	5	NA	NA	-6662	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.2565175405668	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	15720778	15734088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_15728471_15729420_15729553_15730228_15730412_15732955
ES.10205.42	chr14	+	3609	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-33227	-1	intron_retention	TRUE	canonical	0	0	junction_1	11.4318633651737	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGTGTATGCTTCAGC	NA	False	NA	NA	False	AATAAA	-16	NA	16024063	16063945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16024158_16056253_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.43	chr14	+	2180	7	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14849	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.46337971105226	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	16042441	16063938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.44	chr14	+	1884	5	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14816	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6624340560681	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042474	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.45	chr14	+	2002	6	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14796	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.4383906805599	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	16042494	16063943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.46	chr14	+	3391	6	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14683	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.3344085462111	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042607	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16044244_16047431_16047583_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.47	chr14	+	2138	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14667	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	16042623	16063943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.48	chr14	+	2070	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14627	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042663	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057315_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.49	chr14	+	1934	7	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14626	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.21108319357027	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042664	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044240_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062818
ES.10205.5	chr14	+	5520	9	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90237	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1143761342085	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	6831	False	NA	NA	False	AATAAA	-18	NA	14810969	14924623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14913640_14916855_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.50	chr14	+	2314	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14625	215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.16292440618547	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTATTTGATATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	16042665	16064161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.51	chr14	+	2074	8	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14621	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.21179368294486	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042669	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16056997_16057134_16057290_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.52	chr14	+	2784	9	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14618	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.97217922246318	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	16042672	16063943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16056997_16057134_16057293_16057426_16058159_16058323_16059272_16059405_16059518_16060263_16062813
ES.10205.53	chr14	+	2225	9	NNC	ENSMUSG00000096904.8	novel	1745	5	NA	NA	-14617	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.8423695919137	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16042673	16063940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16042755_16044129_16044244_16047431_16047583_16051200_16051366_16057315_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ES.10205.54	chr14	+	1356	1	Intergenic	novelGene_8584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	16053631	16054987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_16053600_16055000
ES.10205.6	chr14	+	2085	6	NNC	ENSMUSG00000063277.8	novel	615	5	NA	NA	-14828	4557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.54919333848297	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATACAATCACTGGTAA	6834	False	NA	NA	False	AATAAA	-44	NA	14810972	14833435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14815931_14816083_14826662_14826826_14827775_14827908_14828576_14828760_14832259
ES.10205.7	chr14	+	2290	8	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90232	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.4010804035633	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAACACAGCAGTGTA	6836	False	NA	NA	False	AATAAA	-7	NA	14810974	14924612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.8	chr14	+	6400	7	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90228	1	intron_retention	FALSE	non_canonical	0	0	junction_1	2.23606797749979	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	6840	False	NA	NA	False	AATAAA	-18	NA	14810978	14924623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14913640_14918042_14918991_14919124_14919799_14919983_14923478
ES.10205.9	chr14	+	5678	9	NNC	ENSMUSG00000079364.4	novel	2055	7	NA	NA	-90213	183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1143761342085	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTGATATTTTCT	6855	False	NA	NA	False	TATAAA	-16	NA	14810993	14924805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_14811253_14902732_14902847_14907121_14907273_14913640_14916855_14917011_14917147_14917878_14918042_14918991_14919124_14919799_14919983_14923478
ES.10206.1	chr14	-	222	1	Intergenic	novelGene_8581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGCTCAGAACTGAACAA	NA	False	NA	NA	False	NA	NA	NA	14785462	14785240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_14785200_14785500
ES.10207.1	chr14	-	2420	2	Antisense	novelGene_ENSMUSG00000079364.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGTTCCCCCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	14901756	14899298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_14900244_14900281
ES.10208.1	chr14	-	169	1	Intergenic	novelGene_8583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGATGAAGCGCGGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	15295674	15295505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_15295500_15295700
ES.10209.1	chr14	+	2063	6	NNC	ENSMUSG00000079396.5	novel	1991	6	NA	NA	-277	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.9674669249697	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	8557	False	NA	NA	False	AATAAA	-11	NA	16182245	16209837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16182557_16202250_16202386_16203117_16203281_16204230_16204363_16205037_16205221_16208698
ES.10209.2	chr14	+	4323	4	ISM	ENSMUSG00000079396.5	ENSMUST00000170104.3	1991	6	17896	182	17896	-182	3prime_fragment	FALSE	canonical	0	0	junction_1	19.3275853524323	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	NA	False	NA	NA	False	AATAAA	-18	NA	16200418	16209844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_16203281_16204230_16204363_16205037_16205221_16208698
ES.1021.1	chr1	-	3527	2	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTT	8249	False	NA	NA	False	NA	NA	NA	91404949	91399015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_91402364_91404770
ES.10210.1	chr14	+	2237	9	Fusion	ENSMUSG00000094370.8_ENSMUSG00000094634.9	novel	1955	7	NA	NA	-1	-6	multi-exon	FALSE	canonical	0	0	junction_2	7.18396652275051	60	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16361106	16751431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16361193_16362573_16362688_16733915_16734067_16743531_16743668_16743824_16743960_16744691_16744855_16745804_16745937_16746611_16746795_16750294
ES.10210.10	chr14	+	1892	7	Fusion	ENSMUSG00000094370.8_ENSMUSG00000090707.9	novel	2051	7	NA	NA	-81452	-6	multi-exon	FALSE	canonical	0	0	junction_1	6.70820393249937	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16507938	16751431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16508004_16589364_16589536_16740435_16740534_16744738_16744855_16745804_16745937_16746611_16746795_16750304
ES.10210.11	chr14	+	1997	7	Fusion	ENSMUSG00000094370.8_ENSMUSG00000090707.9	novel	2051	7	NA	NA	-81452	-1	multi-exon	FALSE	canonical	0	0	junction_1	6.70820393249937	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTGTATGCTTCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	16507938	16751436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16508004_16589364_16589536_16733915_16734067_16744691_16744855_16745804_16745937_16746611_16746795_16750304
ES.10210.12	chr14	+	454	2	NNC	ENSMUSG00000090512.9	novel	1758	5	NA	NA	2844	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16642287	16647835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16642422_16647515
ES.10210.13	chr14	+	1822	1	Genic_Genomic	ENSMUSG00000096629.8	novel	NA	NA	NA	NA	-867	-16448	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAATGTCCTCATAGTT	NA	False	NA	NA	False	AAGAAA	-9	NA	16660947	16662769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_16660900_16662800
ES.10210.14	chr14	+	5206	5	ISM	ENSMUSG00000096629.8	ENSMUST00000112758.10	1813	6	6337	6	6337	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	10.2225241501304	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16668151	16679211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_16671743_16672474_16672638_16673586_16673719_16674393_16674577_16678074
ES.10210.15	chr14	+	2925	4	NIC	ENSMUSG00000096629.8	novel	1813	6	NA	NA	9539	183	intron_retention	FALSE	canonical	0	0	junction_1	9.7410927974683	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTGATATTTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	16671353	16679400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_16672638_16673586_16673719_16674393_16674577_16678074
ES.10210.16	chr14	+	1179	2	Fusion	ENSMUSG00000094370.8_ENSMUSG00000096629.8	novel	1813	6	NA	NA	12720	-6	multi-exon	FALSE	canonical	1	5	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16674534	16751431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16674577_16750294
ES.10210.17	chr14	+	3532	5	ISM	ENSMUSG00000094370.8	ENSMUST00000177556.8	1955	7	13847	6	13847	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	7.79422863405995	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16742042	16751431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_16743960_16744691_16744855_16745804_16745937_16746611_16746795_16750294
ES.10210.2	chr14	+	1129	7	Fusion	ENSMUSG00000094634.9_ENSMUSG00000090643.9	novel	1756	5	NA	NA	1	-6	multi-exon	FALSE	canonical	0	0	junction_2	12.953978367882	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16361108	16499023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16361193_16362573_16362688_16490638_16490771_16491501_16491665_16492619_16492752_16493428_16493613_16498703
ES.10210.3	chr14	+	2981	10	Fusion	ENSMUSG00000094634.9_ENSMUSG00000090643.9	novel	1756	5	NA	NA	3	-6	multi-exon	FALSE	non_canonical	0	0	junction_3	12.212117034697	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16361110	16499023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16361193_16362573_16362688_16437386_16437538_16440912_16440954_16477334_16478994_16490635_16490771_16491501_16491665_16492619_16492752_16493428_16493613_16498703
ES.10210.4	chr14	+	1803	2	NNC	ENSMUSG00000094634.9	novel	1955	7	NA	NA	28	106029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAAAGATCCATTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	16361135	16488507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16361193_16486761
ES.10210.5	chr14	+	1228	8	Fusion	ENSMUSG00000094634.9_ENSMUSG00000090643.9	novel	1756	5	NA	NA	63	1	multi-exon	FALSE	canonical	0	0	junction_3	12.5779204017458	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGTATGCTTCAGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	16361170	16499030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16361193_16362573_16362688_16437386_16437538_16490635_16490771_16491501_16491665_16492619_16492752_16493428_16493613_16498703
ES.10210.6	chr14	+	3210	6	NNC	ENSMUSG00000091568.9	novel	1956	7	NA	NA	138	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	12.416118556135	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	16431701	16453008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_16433145_16437386_16437538_16447189_16447353_16448308_16448441_16449113_16449297_16451870
ES.10210.7	chr14	+	2191	8	Fusion	ENSMUSG00000094370.8_ENSMUSG00000090707.9	novel	2051	7	NA	NA	-81508	-8	multi-exon	TRUE	canonical	0	0	junction_1	6.29868791001389	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	16507882	16751429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16508004_16589364_16589536_16733915_16734067_16743824_16743960_16744691_16744855_16745804_16745937_16746611_16746795_16750294
ES.10210.8	chr14	+	1871	6	Fusion	ENSMUSG00000094370.8_ENSMUSG00000090707.9	novel	2051	7	NA	NA	-81479	-3	multi-exon	FALSE	canonical	0	0	junction_1	7.2	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	16507911	16751434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16508004_16589364_16589536_16744691_16744855_16745804_16745937_16746611_16746795_16750304
ES.10210.9	chr14	+	2191	9	Fusion	ENSMUSG00000094370.8_ENSMUSG00000096629.8	novel	1813	6	NA	NA	-153876	-8	multi-exon	FALSE	canonical	0	0	junction_1	5.95294044989533	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	16507938	16751429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_16508007_16661720_16661872_16740435_16740534_16743531_16743668_16743824_16743960_16744691_16744855_16745804_16745937_16746611_16746795_16750304
ES.10211.1	chr14	-	175	1	Intergenic	novelGene_8585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGAATTT	NA	False	NA	NA	False	NA	NA	NA	16559195	16559020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_16559000_16559200
ES.10212.1	chr14	-	964	4	NNC	ENSMUSG00000095295.9	novel	1945	7	NA	NA	-322	-8929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.48331477354788	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	16968421	16955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_16956067_16963189_16963341_16966519_16966634_16968014
ES.10213.1	chr14	+	11838	3	NIC	ENSMUSG00000094825.9	novel	1813	6	NA	NA	3943	2	intron_retention	FALSE	canonical	0	0	junction_1	8	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTATGCTTCTGCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	17018248	17031710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_17025129_17026077_17026210_17026884
ES.10213.2	chr14	+	2397	7	NNC	ENSMUSG00000094825.9	novel	1813	6	NA	NA	9147	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.96284793999944	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17023452	17031702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_17023942_17024098_17024234_17024965_17025129_17026077_17026210_17026884_17027068_17030116_17030275_17030565
ES.10214.1	chr14	+	5213	1	Antisense	novelGene_ENSMUSG00000094628.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTACTTATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	17742549	17747762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_17742500_17747800
ES.10215.1	chr14	-	6776	4	ISM	ENSMUSG00000094132.8	ENSMUST00000166776.8	882	7	10380	-1057	10380	1057	intron_retention	FALSE	canonical	0	0	junction_3	13.589211407093	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17603817	17592864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489
ES.10215.10	chr14	-	1972	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-4	1049	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACACAGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-9	NA	17614201	17592872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17614118
ES.10215.11	chr14	-	4674	7	NNC	ENSMUSG00000094628.8	novel	1949	7	NA	NA	58	2746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.73353657780945	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTGTGTTGATTACA	NA	False	NA	NA	False	AATACA	-14	NA	17742940	17719533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17723423_17725968_17726152_17726826_17726959_17727908_17728072_17728803_17728939_17738076_17738228_17742919
ES.10215.12	chr14	-	791	3	NNC	ENSMUSG00000094628.8	novel	1949	7	NA	NA	-190	-8987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGGACAGAATGA	NA	False	NA	NA	False	AATAAA	-35	NA	17743188	17731266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17731638_17738076_17738228_17742919
ES.10215.2	chr14	-	5064	4	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	2	1055	intron_retention	FALSE	canonical	0	0	junction_1	0	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGTGTATGCTTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	17614195	17592866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17597540_17598489_17598653_17609286_17609438_17614118
ES.10215.4	chr14	-	3039	9	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	178	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.1488915650922	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGTGTATGCTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	17614019	17592867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17611986_17612055_17612629_17612744_17613056
ES.10215.5	chr14	-	2083	9	Fusion	ENSMUSG00000094628.8_ENSMUSG00000094132.8	novel	882	7	NA	NA	1	1051	multi-exon	TRUE	non_canonical	0	0	junction_3	10.1488915650922	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17742997	17592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17609286_17609438_17612629_17612744_17614118_17614127_17742927
ES.10215.6	chr14	-	2235	9	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-15	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.1488915650922	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17614212	17592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386_17599522_17599678_17599815_17609286_17609438_17612629_17612744_17614118
ES.10215.7	chr14	-	1837	6	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-2	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.0565334984812	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17614199	17592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17614118
ES.10215.8	chr14	-	1953	7	NNC	ENSMUSG00000094132.8	novel	882	7	NA	NA	-4	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3284303119776	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17614201	17592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17609286_17609438_17612629_17612744_17614118
ES.10215.9	chr14	-	5967	5	ISM	ENSMUSG00000094132.8	ENSMUST00000166776.8	882	7	10449	-1051	10449	1051	3prime_fragment	FALSE	canonical	0	0	junction_3	12.8646803302686	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17603748	17592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_17593998_17596548_17596732_17597407_17597540_17598489_17598653_17599386
ES.10216.1	chr14	-	375	2	ISM	ENSMUSG00000091700.8	ENSMUST00000169465.8	984	5	2980	-8	2922	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17757555	17752100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_17752421_17757500
ES.10217.1	chr14	+	2511	1	FSM	ENSMUSG00000090865.3	ENSMUST00000167284.3	556	1	399	-2354	399	2354	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAGTACACAGAATTAAA	NA	False	NA	NA	False	AAAACA	-43	NA	17940864	17943375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_17940900_17943400
ES.10218.1	chr14	-	6636	9	Fusion	ENSMUSG00000090472.9_ENSMUSG00000079386.9_ENSMUSG00000091894.2	novel	516	4	NA	NA	-15739	900	multi-exon	TRUE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGATTATTATCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	17970754	17906125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_17910746_17930160_17930984_17931652_17931785_17932710_17932874_17952946_17953130_17953805_17953938_17954887_17955051_17965695_17965847_17970485
ES.10218.2	chr14	-	4885	4	FSM	ENSMUSG00000079386.9	ENSMUST00000112776.4	519	4	-3308	-1058	-3308	1058	multi-exon	FALSE	canonical	0	0	junction_2	16.0277537068951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	17958323	17949262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_17950397_17952946_17953130_17953805_17953938_17954887
ES.10218.3	chr14	-	5975	5	NNC	ENSMUSG00000079386.9	novel	519	4	NA	NA	-5137	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.1084400165827	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	17960152	17949269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_17950397_17952946_17953130_17953805_17953938_17954887_17955051_17955782
ES.10218.4	chr14	-	1745	4	Intergenic	novelGene_8586	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATCCATTATTCTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	17970758	17958118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_17959326_17965695_17965847_17968999_17969114_17970485
ES.10218.5	chr14	-	1572	4	Intergenic	novelGene_8587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	17970748	17958281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_17959326_17965695_17965847_17968999_17969114_17970485
ES.10219.1	chr14	-	2103	6	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-91736	194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.8	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCTTTACTTACATT	NA	False	NA	NA	False	TATAAA	-27	NA	18450983	18336794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18354336_18354488_18450852
ES.10219.10	chr14	-	1983	7	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-91681	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.21108319357027	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450928	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18354336_18354488_18450852
ES.10219.12	chr14	-	2089	8	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-542	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.41593350361254	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18359789	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18354336_18354488_18357666_18357781_18359721
ES.10219.13	chr14	-	2074	8	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-91683	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.32992949004287	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450930	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344585_18354336_18354488_18357666_18357781_18450852
ES.10219.14	chr14	-	707	1	Intergenic	novelGene_8588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTATGTATTTCTTACT	NA	False	NA	NA	False	AATGAA	-18	NA	18359106	18358399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_18358400_18359100
ES.10219.15	chr14	-	3110	6	NNC	ENSMUSG00000096775.2	novel	1817	6	NA	NA	-4865	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.1271911209377	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	NA	False	NA	NA	False	AATAAA	-18	NA	18450697	18428403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18429550_18433049_18433233_18433907_18434040_18434989_18435153_18445775_18445927_18449362
ES.10219.16	chr14	-	2074	8	NNC	ENSMUSG00000096775.2	novel	1817	6	NA	NA	-5077	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.85944670497923	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450909	18428410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18429550_18433049_18433233_18433907_18434040_18434989_18435153_18435884_18436020_18445775_18445927_18449362_18449477_18450852
ES.10219.17	chr14	-	898	5	NNC	ENSMUSG00000096775.2	novel	1817	6	NA	NA	-5152	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.06828373317832	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450984	18428410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18428731_18433907_18434040_18434989_18435153_18445775_18445927_18450852
ES.10219.18	chr14	-	2150	4	NNC	ENSMUSG00000096775.2	novel	1817	6	NA	NA	-4962	-9246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTGAGTGCTGA	NA	False	NA	NA	False	AATAAA	-33	NA	18450794	18437648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18439407_18445775_18445927_18449362_18449477_18450667
ES.10219.19	chr14	-	179	1	Intergenic	novelGene_8589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGCGCCA	NA	False	NA	NA	False	NA	NA	NA	18447085	18446906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_18446900_18447100
ES.10219.2	chr14	-	2154	5	ISM	ENSMUSG00000091563.9	ENSMUST00000170207.8	1961	7	14427	-181	14427	181	3prime_fragment	FALSE	canonical	0	0	junction_2	2.44948974278318	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTATTTGATATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	18344820	18336807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474
ES.10219.3	chr14	-	1985	6	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	59	181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.8	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTATTTGATATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	18359188	18336807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18354336_18354488_18359162
ES.10219.4	chr14	-	5600	6	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	10643	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.33238075793812	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	18348604	18336988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18344766
ES.10219.5	chr14	-	3133	5	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	13776	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.59807621135332	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	18345471	18336990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338128_18341636_18342630_18343579_18343743_18344474_18344610_18344766
ES.10219.6	chr14	-	4808	10	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	148	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.26623089493013	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGTGTATGCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	18359099	18336991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18344766_18347336_18347911_18348010_18354336_18354488_18357666_18357781_18358982
ES.10219.7	chr14	-	2152	8	NNC	ENSMUSG00000091563.9	novel	1961	7	NA	NA	-91736	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.32992949004287	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450983	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18354336_18354488_18357666_18357781_18450852
ES.10219.8	chr14	-	2219	9	Fusion	ENSMUSG00000096775.2_ENSMUSG00000091563.9	novel	1961	7	NA	NA	-5101	-6	multi-exon	FALSE	canonical	0	0	junction_2	4.09267638593623	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18450933	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344607_18344766_18344903_18347911_18348010_18445775_18445927_18450852
ES.10219.9	chr14	-	8253	5	ISM	ENSMUSG00000091563.9	ENSMUST00000170207.8	1961	7	8141	6	8141	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	2.44948974278318	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18351106	18336994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474
ES.1022.1	chr1	-	177	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTCTCTTTATAAC	NA	False	NA	NA	False	NA	NA	NA	91415079	91414902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_91414900_91415100
ES.10220.1	chr14	-	8624	7	Fusion	ENSMUSG00000091756.2_ENSMUSG00000095686.8	novel	1568	4	NA	NA	-7041	-222	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18513267	18462988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_18463101_18499688_18500704_18503255_18503439_18504113_18504246_18505196_18505360_18506091_18506227_18506383
ES.10221.1	chr14	-	1804	7	Fusion	ENSMUSG00000096793.8_ENSMUSG00000079402.10	novel	1955	7	NA	NA	20	-6	multi-exon	TRUE	non_canonical	0	0	junction_1	2.60874597374975	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18817723	18639093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_18640221_18642105_18642289_18642964_18643097_18644049_18644213_18658123_18658238_18659614_18659623_18817646
ES.10221.3	chr14	-	3223	7	NNC	ENSMUSG00000096793.8	novel	1955	7	NA	NA	244	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.86338998124982	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	5693	False	NA	NA	False	AATAAA	-11	NA	18659455	18639093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18640221_18642105_18642289_18642964_18643097_18644049_18644213_18644944_18645080_18654751_18654903_18658123
ES.10222.1	chr14	-	3306	8	NNC	ENSMUSG00000095195.8	novel	1955	7	NA	NA	244	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTGTATGCTTCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	18897506	18875553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18883030_18883166_18892819_18892971_18895531_18895600_18896174
ES.10222.2	chr14	-	3271	7	NNC	ENSMUSG00000095195.8	novel	1955	7	NA	NA	210	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	18897540	18875554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18883030_18883166_18892819_18892971_18896174
ES.10222.3	chr14	-	3289	7	NNC	ENSMUSG00000095195.8	novel	1955	7	NA	NA	163	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18897587	18875558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18883030_18883141_18892819_18892971_18896174
ES.10222.4	chr14	-	1979	7	Fusion	ENSMUSG00000096488.2_ENSMUSG00000095195.8	novel	1955	7	NA	NA	6	-6	multi-exon	FALSE	canonical	0	0	junction_3	7.22072634081149	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19057153	18875558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18892819_18892971_19055566_19055681_19057054
ES.10222.5	chr14	-	3076	6	NNC	ENSMUSG00000095195.8	novel	1955	7	NA	NA	266	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.54919333848297	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	18897484	18875558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18892819_18892971_18896174
ES.10222.6	chr14	-	772	4	NNC	ENSMUSG00000096488.2	novel	1933	7	NA	NA	-31	-8848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42809041582063	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	19057190	19044820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19045192_19052238_19052390_19055566_19055681_19057054
ES.10223.1	chr14	-	2703	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-539	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.4142135623731	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTCTTTTTTATTT	NA	False	NA	NA	False	TATAAA	-6	NA	19137685	19114801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19137061
ES.10223.10	chr14	-	1669	6	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-43	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.6	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACACAGCAGTGTATGC	NA	False	NA	NA	False	AATAAA	-10	NA	19137189	19114980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19115930_19119615_19119799_19120474_19120607_19121556_19121720_19135569_19135684_19137061
ES.10223.11	chr14	-	2056	6	NIC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-237	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.54919333848297	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAGCTGTCAGAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	19137383	19114995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19137061
ES.10223.12	chr14	-	1301	3	NNC	ENSMUSG00000096039.9	novel	1695	7	NA	NA	-20	110584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGACAGAATGT	NA	False	NA	NA	False	AATAAA	-35	NA	19261216	19124837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19125883_19132241_19132393_19261111
ES.10223.2	chr14	-	2102	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-536	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.38505138783324	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCGT	NA	False	NA	NA	False	AATAAA	-18	NA	19137682	19114972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122562_19132241_19132393_19135569_19135684_19137577
ES.10223.3	chr14	-	2031	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-582	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.46249406456535	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGTGTATGCTTCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	19137728	19114974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137582
ES.10223.4	chr14	-	1774	5	NIC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-74	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.6393596310755	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137220	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19137061
ES.10223.5	chr14	-	2403	8	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-303	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.38505138783324	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137449	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19135569_19135684_19137061
ES.10223.6	chr14	-	2003	7	FSM	ENSMUSG00000096574.8	ENSMUST00000177786.8	1955	7	-54	6	-54	-6	multi-exon	FALSE	canonical	0	0	junction_3	1.46249406456535	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137200	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19135569_19135684_19137061
ES.10223.7	chr14	-	2256	7	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-291	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46249406456535	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137437	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19135569_19135684_19137061
ES.10223.8	chr14	-	2105	7	Fusion	ENSMUSG00000096574.8_ENSMUSG00000096039.9	novel	1955	7	NA	NA	-40	-6	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	46	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19261325	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_19116107_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19132241_19132393_19261111
ES.10223.9	chr14	-	1894	6	NNC	ENSMUSG00000096574.8	novel	1955	7	NA	NA	-43	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.46969384566991	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	19137189	19114979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19132241_19132393_19137061
ES.10224.1	chr14	-	1567	8	Fusion	ENSMUSG00000093979.9_ENSMUSG00000079409.9	novel	984	5	NA	NA	-325	-6	multi-exon	FALSE	canonical	0	0	junction_1	8.13157112614726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCAGTGTATGCT	7663	False	NA	NA	False	AATAAA	-11	NA	19635528	19273097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_19273418_19278483_19278668_19437654_19437787_19438741_19438905_19439636_19439747_19451173_19451315_19633632_19633747_19635125
ES.10225.1	chr14	+	5758	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-419	0	intron_retention	FALSE	canonical	3	1309	junction_13	134.013064232714	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19800913	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.10	chr14	+	4994	22	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	475.201258234513	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801313	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19856579_19856679_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.100	chr14	+	4827	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	133	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	478.25844776349	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801484	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19804126_19804233_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.102	chr14	+	4375	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	1241	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	572.092483782124	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19802592	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829658_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847430_19847485_19847643_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.103	chr14	+	4067	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-4371	6989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	375.270598582762	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAACTTACTGCC	2649	False	NA	NA	False	TTTAAA	-3	NA	19813933	19868844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861835_19868822
ES.10225.104	chr14	+	3878	19	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	383.73117841003	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	7053	False	NA	21	True	AATAAA	-13	NA	19818337	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852464_19852555_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.105	chr14	+	3958	18	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	389.904530946481	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	7079	False	NA	22	True	AATAAA	-14	NA	19818363	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860034_19860172_19861021_19861135_19861253
ES.10225.107	chr14	+	3491	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	369	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	501.12235804096	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	7389	False	NA	23	True	AATAAA	-15	NA	19818673	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831252_19831317_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861446_19861524
ES.10225.108	chr14	+	3952	1	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	9224	-24718	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1870	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCTTTCTTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	19827528	19831480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19827500_19831500
ES.10225.109	chr14	+	3306	17	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	26729	1	9757	-1	3prime_fragment	FALSE	canonical	3	1309	junction_10	128.941832210303	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19828061	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.11	chr14	+	4415	6	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	-38	24718	-19	-24718	intron_retention	FALSE	canonical	3	1333	junction_3	77.0755473545274	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCTTTCTTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	19801313	19831480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805
ES.10225.110	chr14	+	3109	17	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	9892	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	405.224860417028	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19828196	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19828214_19828805_19829066_19829681_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.112	chr14	+	2949	16	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	10697	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	415.032764436202	2041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19829001	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860055_19860172_19861021_19861135_19861253
ES.10225.113	chr14	+	2921	16	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	10726	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	415.644955327126	2041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19829030	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861262
ES.10225.114	chr14	+	2909	15	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	28269	3	11297	-3	3prime_fragment	FALSE	canonical	3	1309	junction_8	132.530031252066	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19829601	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.116	chr14	+	5478	13	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	12075	-1	intron_retention	FALSE	canonical	2	28	junction_6	450.996389182392	2031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19830379	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852536_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.117	chr14	+	9948	12	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	17463	-1	intron_retention	TRUE	non_canonical	0	0	junction_9	624.143605005628	2012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	5087	False	NA	23	True	AATAAA	-15	NA	19835767	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856045_19857994_19858501_19858935_19860172_19861021_19861135_19861253
ES.10225.118	chr14	+	4130	15	NNC	ENSMUSG00000021806.5	novel	543	3	NA	NA	17912	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	575.475810232946	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	5536	False	NA	21	True	AATAAA	-13	NA	19836216	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19836930_19837090_19837482_19839186_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.119	chr14	+	6962	12	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-16520	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	473.502284285029	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	8103	False	NA	22	True	AATAAA	-14	NA	19838783	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858365_19858806_19860172_19861021_19861135_19861253
ES.10225.12	chr14	+	4461	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	365.846402196331	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801314	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801411_19802518_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.120	chr14	+	2122	13	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-14937	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	462.21585866346	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	9686	False	NA	21	True	AATAAA	-13	NA	19840366	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861392_19861578
ES.10225.121	chr14	+	6152	9	NIC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-10086	-1	intron_retention	FALSE	canonical	3	1309	junction_3	137.546299023274	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19845217	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.122	chr14	+	4036	10	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-8073	0	intron_retention	FALSE	canonical	1	1	junction_3	526.400987841018	2012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19847230	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19847352_19848464_19848714_19852405_19852433_19852536_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.124	chr14	+	1634	8	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-2848	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	584.98055087153	2010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19852455	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861027_19861135_19861253
ES.10225.125	chr14	+	4379	5	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	-1152	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	729.860603129118	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19854151	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19856083_19857994_19858365_19858806_19860172_19861021_19861135_19861253
ES.10225.126	chr14	+	4141	4	NNC	ENSMUSG00000021806.5	novel	4105	19	NA	NA	999	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	818.368431019238	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19856302	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19858362_19858803_19860172_19861021_19861135_19861253
ES.10225.127	chr14	+	1196	2	ISM	ENSMUSG00000021806.5	ENSMUST00000224263.2	4105	19	42234	2	5235	-2	3prime_fragment	FALSE	canonical	3	1731	junction_1	0	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19860538	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19861135_19861253
ES.10225.13	chr14	+	4772	19	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	370.227707709128	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGTCTAAATATCTATA	NA	False	NA	25	True	AATAAA	-17	NA	19801317	19861856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858247_19861230
ES.10225.15	chr14	+	4903	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	366.340265327195	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801317	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841734_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.16	chr14	+	4470	18	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	393.829982814059	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801318	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.17	chr14	+	4849	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	365.415828201243	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801318	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856045_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.19	chr14	+	4739	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	373.701711969702	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801319	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.2	chr14	+	5299	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-413	-10	-413	10	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTATATTGTCTCCA	NA	False	NA	34	True	AATAAA	-26	NA	19800919	19861865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.20	chr14	+	2425	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	-13	-35434	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	1788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATTTTGTGGTACAG	NA	False	NA	NA	False	TTTAAA	-23	NA	19801319	19820764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
ES.10225.21	chr14	+	4316	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-13	-744	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_20	466.114092792741	2042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTACCCGTACTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	19801319	19861111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19860785_19860838_19861021
ES.10225.22	chr14	+	4612	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-13	-329	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_20	460.456049197565	2049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAGGCCAAATTCAT	NA	False	NA	23	True	ATTAAA	-20	NA	19801319	19861526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19860785_19860838_19861021_19861135_19861253
ES.10225.23	chr14	+	4805	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	363.22191563836	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801319	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813814_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.25	chr14	+	4879	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	484.142809509756	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801320	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852632_19853121_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860166_19861021_19861135_19861253
ES.10225.26	chr14	+	4731	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801320	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861466_19861622
ES.10225.27	chr14	+	4686	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	372.355242467187	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801320	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.28	chr14	+	5056	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-12	-168	-12	168	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATCTCTAGAACATAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	19801320	19862023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.3	chr14	+	4942	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	-392	326	-392	-326	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGGCCAAATTCATTCA	NA	False	NA	26	True	ATTAAA	-23	NA	19800940	19861529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.31	chr14	+	4030	15	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	-30	2470	-11	-2470	5prime_fragment	FALSE	canonical	3	1309	junction_14	114.833952882821	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGAGGAGGTGGTCATT	NA	False	NA	NA	False	NA	NA	NA	19801321	19853728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116
ES.10225.32	chr14	+	2336	8	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	-11	-25860	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	527.969812062186	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGTTGCATACGGTATA	NA	False	NA	NA	False	AATAAA	-15	NA	19801321	19830338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19830181
ES.10225.33	chr14	+	4057	17	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	405.516563895669	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801321	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.34	chr14	+	4856	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_2	360.781984029136	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801321	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802588_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.36	chr14	+	4751	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_13	359.100442077144	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801326	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852536_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.37	chr14	+	4523	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-329	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_2	360.781984029136	2049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAGGCCAAATTCAT	NA	False	NA	23	True	ATTAAA	-20	NA	19801326	19861526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802588_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.38	chr14	+	3499	14	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	-25	3485	-6	-3485	5prime_fragment	FALSE	canonical	3	1333	junction_3	104.320965799428	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTGGGTTGACTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	19801326	19852713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405
ES.10225.39	chr14	+	6276	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	1309	junction_13	135.159001471121	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801326	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.4	chr14	+	5288	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-360	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_20	460.456049197565	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19800972	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19860785_19860838_19861021_19861135_19861253
ES.10225.40	chr14	+	4545	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	362.19570331521	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801326	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861149_19861601
ES.10225.42	chr14	+	3422	10	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	-6	-22530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	634.80976055726	1884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCACATAGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	19801326	19833668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19832611_19833434_19833473
ES.10225.43	chr14	+	4644	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	370.540923755103	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801326	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19860126_19860172_19861021_19861135_19861253
ES.10225.44	chr14	+	4924	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	361.655416107653	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801326	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858198_19860047_19860172_19861021_19861135_19861253
ES.10225.48	chr14	+	4812	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801329	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861556_19861622
ES.10225.49	chr14	+	1696	8	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	590.498751489115	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801345	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802419_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.50	chr14	+	4846	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	487.069633112145	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801351	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841712_19847231_19847352_19848464_19848714_19852407_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.51	chr14	+	3668	14	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	0	-6482	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	415.133257282255	1970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	19801351	19849716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19849214
ES.10225.52	chr14	+	4425	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801351	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861291_19861720
ES.10225.53	chr14	+	6599	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	-337	intron_retention	FALSE	canonical	3	1309	junction_14	132.951118836962	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTATTTAAAAGGCC	NA	False	NA	15	True	ATTAAA	-12	NA	19801351	19861518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.54	chr14	+	4628	22	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	-328	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	475.201258234513	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGGCCAAATTCATT	NA	False	NA	24	True	ATTAAA	-21	NA	19801351	19861527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19856579_19856679_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.55	chr14	+	4878	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_18	356.350263083949	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801352	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858175_19860047_19860172_19861021_19861135_19861253
ES.10225.57	chr14	+	3401	10	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	1	-22523	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	634.80976055726	1884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTCTTTATCATCTGT	NA	False	NA	NA	False	NA	NA	NA	19801352	19833675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19832611_19833448_19833489
ES.10225.6	chr14	+	4043	17	FSM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	-53	-14	-34	14	multi-exon	FALSE	canonical	3	1309	junction_14	123.598391979831	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGGGTGTCAAGCATT	NA	False	NA	NA	False	AATAAA	-37	NA	19801298	19856212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
ES.10225.60	chr14	+	3289	16	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	415.811495752583	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19818485_19840418_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.62	chr14	+	3405	14	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	2	-6705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	415.650854848266	1970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAGTAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	19801353	19849493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19849252
ES.10225.63	chr14	+	4802	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861573_19861625
ES.10225.64	chr14	+	1973	10	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	531.254792280491	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801440_19848517_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.65	chr14	+	8331	19	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	1309	junction_13	135.178585582185	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.66	chr14	+	4732	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801353	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861408_19861528
ES.10225.67	chr14	+	6934	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	1309	junction_14	132.951118836962	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.68	chr14	+	4786	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801353	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861408_19861474
ES.10225.69	chr14	+	2425	8	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	2	24718	2	-24718	5prime_fragment	FALSE	canonical	3	1333	junction_3	105.114708965094	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCTTTCTTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	19801353	19831480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202
ES.10225.7	chr14	+	4791	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	357.346291266729	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801312	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852433_19852536_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.72	chr14	+	4862	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	364.050491003652	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801353	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840337_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.73	chr14	+	4716	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	478.773043831835	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801353	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858155_19860043_19860172_19861021_19861135_19861397
ES.10225.74	chr14	+	4790	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801353	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861573_19861634
ES.10225.75	chr14	+	4465	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	373.921088746567	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801353	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19818433_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.76	chr14	+	2218	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	2	-35607	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	1788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTTCGCCTTGATGA	NA	False	NA	NA	False	ATTAAA	-17	NA	19801353	19820591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
ES.10225.78	chr14	+	4851	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	481.568943662276	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829812_19831218_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858155_19860043_19860172_19861021_19861135_19861253
ES.10225.79	chr14	+	4555	19	ISM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	21	1269	2	-1269	5prime_fragment	FALSE	canonical	3	1309	junction_14	126.412903701411	2039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTTGACTCCCCGCTA	NA	False	NA	NA	False	AATAAA	-24	NA	19801353	19860586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047
ES.10225.8	chr14	+	4892	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-19	6989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATAAACTTACTGCC	NA	False	NA	NA	False	TTTAAA	-3	NA	19801313	19868844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861838_19868829
ES.10225.80	chr14	+	3822	7	ISM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	2	24718	2	-24718	intron_retention	FALSE	canonical	3	1333	junction_3	98.4046351663489	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCTTTCTTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	19801353	19831480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604
ES.10225.81	chr14	+	5530	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	1309	junction_13	136.259773087191	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801353	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.83	chr14	+	4526	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	364.697473942445	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801353	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19828880_19829760_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.84	chr14	+	4969	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	477.8887715824	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801353	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19843149_19843263_19847228_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.85	chr14	+	4718	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	375.338030472684	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801353	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19848479_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.87	chr14	+	4753	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	357.544751650904	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801353	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253_19861641_19861739
ES.10225.88	chr14	+	4847	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	366.34217270197	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801355	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819010_19828072_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.89	chr14	+	5859	23	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	596.937385104616	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801355	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858365_19858806_19859549_19860047_19860172_19860785_19860838_19861021_19861135_19861253
ES.10225.9	chr14	+	4504	20	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	373.921088746567	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801313	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802606_19818423_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.90	chr14	+	4662	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	472.816533047336	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTGGTCTAAATATC	NA	False	NA	21	True	AATAAA	-13	NA	19801358	19861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858155_19860043_19860172_19861021_19861135_19861253_19861310_19861500
ES.10225.91	chr14	+	5898	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	365.882696365925	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801367	19861855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847430_19847485_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.95	chr14	+	4597	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	36	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	372.019650688798	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTGGTCTAAATATCT	NA	False	NA	22	True	AATAAA	-14	NA	19801387	19861853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.96	chr14	+	5055	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	477.123737854752	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801387	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847430_19847485_19847643_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.97	chr14	+	4666	21	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	364.784302705037	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801393	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829658_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10225.98	chr14	+	7307	19	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1309	junction_14	132.443279264077	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGTCTAAATATCTA	NA	False	NA	23	True	AATAAA	-15	NA	19801394	19861854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ES.10226.1	chr14	-	4246	20	Antisense	novelGene_ENSMUSG00000021806.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGCCAGACTCCAACTTG	147	False	NA	NA	False	NA	NA	NA	19861117	19801351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_19801636_19802308_19802618_19813731_19813966_19818275_19819004_19828061_19828212_19828803_19829049_19829601_19829804_19831200_19831431_19839734_19839882_19840344_19840475_19841575_19841717_19847223_19847349_19848461_19848712_19852403_19852631_19853122_19853287_19855365_19855493_19855907_19856081_19857992_19858151_19860045_19860170_19861019
ES.10226.2	chr14	-	2750	1	Intergenic	novelGene_8590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAATTCTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	19826588	19823838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_19823800_19826600
ES.10227.1	chr14	-	1074	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	-58	546	-58	-546	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTCCATGTATTCTG	1630	False	NA	-4	True	AATAAA	-36	NA	19873950	19861964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.10	chr14	-	946	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	3	-570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1014.18134746975	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTTTGTTTTGC	1691	False	NA	-28	True	AATAAA	-12	NA	19873889	19861988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862306_19864598_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.12	chr14	-	915	7	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1014.18134746975	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTTTGTTTTGC	1688	False	NA	-28	True	AATAAA	-12	NA	19873892	19861988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862272_19864598_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.14	chr14	-	3743	7	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	7	-571	intron_retention	FALSE	canonical	3	2008	junction_3	354.337292232509	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTTTGTTTTG	1695	False	NA	-29	True	AATAAA	-11	NA	19873885	19861989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19870075_19872633_19872759_19873736
ES.10227.15	chr14	-	918	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	1	-574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	902.815347133847	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAAGGCTTGTTTGTT	1689	False	NA	-32	True	AATAAA	-8	NA	19873891	19861992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872690_19873736
ES.10227.16	chr14	-	901	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	75	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	974.359109091401	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTAAAAGGCTTGTTTG	1763	False	NA	-34	True	AATAAA	-6	NA	19873817	19861994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862306_19862416_19862468_19864616_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.17	chr14	-	172	1	Intergenic	novelGene_8591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCATAAGTCACCC	4427	False	NA	NA	False	NA	NA	NA	19871153	19870981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_19871000_19871200
ES.10227.2	chr14	-	1735	7	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	64	-550	intron_retention	FALSE	canonical	3	1848	junction_4	452.088118254248	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTGAGTCCATGTAT	1752	False	NA	-8	True	AATAAA	-32	NA	19873828	19861968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.3	chr14	-	5893	6	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	1	-566	intron_retention	FALSE	canonical	3	2008	junction_2	362.646384236766	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1689	False	NA	-24	True	AATAAA	-16	NA	19873891	19861984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19862306_19862416_19864674_19866252_19866342_19867128_19870075_19872633_19872759_19873736
ES.10227.4	chr14	-	6087	5	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	34	-566	intron_retention	FALSE	canonical	3	2316	junction_2	279.548743513542	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1722	False	NA	-24	True	AATAAA	-16	NA	19873858	19861984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19862306_19862416_19862466_19864604_19870075_19872633_19872759_19873736
ES.10227.5	chr14	-	1002	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	-1	-570	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	945.86932263934	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTTTGTTTTGC	1687	False	NA	-28	True	AATAAA	-12	NA	19873893	19861988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867119_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.8	chr14	-	983	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	7	-570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	974.359109091401	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTTTGTTTTGC	1695	False	NA	-28	True	AATAAA	-12	NA	19873885	19861988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19862306_19862416_19862460_19864600_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ES.10227.9	chr14	-	3386	6	NIC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	-28	-570	intron_retention	FALSE	canonical	3	1848	junction_3	438.969976194272	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTTTGTTTTGC	1660	False	NA	-28	True	AATAAA	-12	NA	19873920	19861988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_19862306_19862416_19862466_19864604_19867216_19869974_19870075_19872633_19872759_19873736
ES.10228.1	chr14	-	3349	1	Intergenic	novelGene_8592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	19903004	19899655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_19899700_19903000
ES.10229.1	chr14	-	3389	2	Intergenic	novelGene_8593	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTCTTTATCTTTGCTA	NA	False	NA	NA	False	AATAAA	-11	NA	19910678	19904811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_19907019_19909496
ES.10229.2	chr14	-	2470	1	Intergenic	novelGene_8594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATTAGCATGGTTAAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	19907996	19905526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_19905500_19908000
ES.1023.1	chr1	+	2251	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	-88	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.1149442096734	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACAGTGCTTACTACTT	8849	False	NA	4	True	ATTAAA	-22	NA	91422280	91455677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.10	chr1	+	3495	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.1149442096734	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8954	False	NA	6	True	ATTAAA	-22	NA	91422385	91457027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91447285_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.11	chr1	+	2363	5	ISM	ENSMUSG00000034292.14	ENSMUST00000189341.7	2257	16	24	25176	-23	-25176	5prime_fragment	FALSE	canonical	3	49	junction_3	4.55521678957215	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTATTACTTACTG	8961	False	NA	NA	False	NA	NA	NA	91422392	91430502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726
ES.1023.13	chr1	+	3206	15	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.9382724466966	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGTATGGACTGTCA	8966	False	NA	3	True	ATTAAA	-19	NA	91422397	91457024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339_91455502_91455778
ES.1023.14	chr1	+	2215	15	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	21.8754591788542	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCAGCTACAGTGCTT	8980	False	NA	-3	True	ATTAAA	-15	NA	91422411	91455670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91454139_91454240_91455339
ES.1023.15	chr1	+	2071	2	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	10	-31093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGCCCAGCCCA	8994	False	NA	NA	False	NA	NA	NA	91422425	91424585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91423129_91423217
ES.1023.17	chr1	+	2448	8	FSM	ENSMUSG00000034292.14	ENSMUST00000187588.2	2374	8	-76	2	-76	-2	multi-exon	FALSE	canonical	3	45	junction_4	5.67486401886892	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	3016	False	NA	6	True	ATTAAA	-22	NA	91445907	91457027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.3	chr1	+	3691	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.6492919606843	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAGTGTATGGACTGTC	8940	False	NA	2	True	ATTAAA	-18	NA	91422371	91457023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455156
ES.1023.4	chr1	+	5019	13	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	10	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	15.7206516687092	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTATGGACTGTCAAA	8947	False	NA	5	True	ATTAAA	-21	NA	91422378	91457026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600
ES.1023.5	chr1	+	3503	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.1149442096734	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8949	False	NA	6	True	ATTAAA	-22	NA	91422380	91457027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.6	chr1	+	3486	14	NIC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	15.1149442096734	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8949	False	NA	6	True	ATTAAA	-22	NA	91422380	91457027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.7	chr1	+	4998	13	NIC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	13	-4	intron_retention	FALSE	canonical	0	0	junction_7	15.7206516687092	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTATGGACTGTCAA	8950	False	NA	4	True	ATTAAA	-20	NA	91422381	91457025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600
ES.1023.8	chr1	+	3492	14	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.6492919606843	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTATGGACTGTCAA	8950	False	NA	4	True	ATTAAA	-20	NA	91422381	91457025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435306_91447299_91447385_91447777_91447862_91448605_91448734_91448918_91448946_91450552_91450630_91453600_91453825_91455339
ES.1023.9	chr1	+	2871	11	NNC	ENSMUSG00000034292.14	novel	3474	15	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.1695737442108	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTATGGACTGTCAAAT	8951	False	NA	6	True	ATTAAA	-22	NA	91422382	91457027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91422611_91425674_91425744_91427223_91427386_91435214_91435306_91447297_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ES.10230.1	chr14	+	2317	2	NNC	ENSMUSG00000114436.2	novel	1474	3	NA	NA	1897	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACTAAACAACCAAACA	NA	False	NA	NA	False	AAAACA	-7	NA	19918944	19922881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_19920450_19922069
ES.10231.1	chr14	+	178	1	Intergenic	novelGene_8595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	20022972	20023150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20023000_20023200
ES.10232.1	chr14	-	3673	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	157	-4	-33	4	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGGGTCACTTTCATTG	NA	False	NA	0	True	AATAAA	-22	NA	20027160	19922622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ES.10232.2	chr14	-	3449	5	NNC	ENSMUSG00000043004.14	novel	3826	4	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.4235520779314	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	-4	True	AATAAA	-18	NA	20027056	19922626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19925652_19925767_19926004_19941353_19941470_20010721_20010763_20027025
ES.10232.3	chr14	-	3620	5	NNC	ENSMUSG00000043004.14	novel	960	5	NA	NA	71	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.9913786695919	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTTCCTACGGGGTCA	NA	False	NA	-9	True	AATAAA	-13	NA	20027056	19922631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19926004_19941353_19941470_19941788_19941849_20010721_20010763_20027025
ES.10232.4	chr14	-	3066	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	185	575	-5	-575	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGACGTATCATACTT	NA	False	NA	NA	False	AATATA	-18	NA	20027132	19923201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ES.10232.5	chr14	-	2534	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	261	1031	71	-1031	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGACTTGTGAGCATG	NA	False	NA	NA	False	ATTAAA	-13	NA	20027056	19923657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ES.10232.6	chr14	-	720	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	200	2906	10	190	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACATTCTGGTAATGAG	NA	False	NA	-16	True	AATAAA	-32	NA	20027117	19925532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ES.10232.7	chr14	-	697	3	NNC	ENSMUSG00000043004.14	novel	458	3	NA	NA	41437	183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	66.5	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGGCTGACATTCTGG	NA	False	NA	-23	True	AATAAA	-25	NA	19985324	19925539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19926004_19941353_19941470_19985207
ES.10232.8	chr14	-	683	2	NNC	ENSMUSG00000043004.14	novel	458	3	NA	NA	100379	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAGCTGAGATATGGC	2949	False	NA	-34	True	AATAAA	-14	NA	19926382	19925550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_19926004_19926152
ES.10233.1	chr14	-	177	1	Intergenic	novelGene_8596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	20071023	20070846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20070800_20071000
ES.10234.1	chr14	-	2229	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	67	19	67	-19	multi-exon	FALSE	canonical	3	53	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTTTGAAAAAACTTAC	5372	False	NA	NA	False	AATAAA	-22	NA	20133184	20125722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20127713_20132945
ES.10234.2	chr14	-	3528	1	NIC	ENSMUSG00000045107.6	novel	2315	2	NA	NA	2525	329	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGAGGCTGGTTTG	7830	False	NA	NA	False	TATAAA	-7	NA	20130726	20127198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20127200_20130700
ES.10234.3	chr14	-	765	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	55	1495	55	329	multi-exon	FALSE	canonical	3	53	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGAGGCTGGTTTG	5360	False	NA	NA	False	TATAAA	-7	NA	20133196	20127198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20127713_20132945
ES.10234.4	chr14	-	2121	1	Intergenic	novelGene_8597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGAAAATAATGGAGATC	8140	False	NA	NA	False	ATTAAA	-10	NA	20130416	20128295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20128300_20130400
ES.10235.1	chr14	+	3826	1	Intergenic	novelGene_8598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGGTTGTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	20177764	20181590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20177800_20181600
ES.10235.2	chr14	+	2172	7	Antisense	novelGene_ENSMUSG00000023243.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAATAATAATT	NA	False	NA	NA	False	NA	NA	NA	20180067	20193596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_20180098_20180481_20180825_20181453_20181553_20191251_20191384_20191695_20191892_20192070_20192127_20192280
ES.10236.1	chr14	+	1637	1	Intergenic	novelGene_8599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	20210540	20212177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20210500_20212200
ES.10237.1	chr14	-	3436	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	-43	-1	-43	1	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGGTATGTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	20231920	20190123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
ES.10237.10	chr14	-	3158	5	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.0394900050896	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTGTGGTATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	20231849	20190126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20192526_20194702_20194872_20195023_20195051_20196632_20196681_20231334
ES.10237.11	chr14	-	2518	6	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.4484983956289	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTGTGTGGTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	20231851	20190127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20190980_20191824_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
ES.10237.12	chr14	-	4892	3	NIC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	27	-3	intron_retention	FALSE	canonical	3	118	junction_2	3	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGTGTGTGGTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	20231850	20190127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20192526_20194702_20196681_20231334
ES.10237.13	chr14	-	2879	2	Genic_Genomic	ENSMUSG00000023243.10	novel	3392	5	NA	NA	28	-27453	multi-exon	FALSE	canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGAGTTTATTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	20231849	20219672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_20221813_20231110
ES.10237.14	chr14	-	198	1	Intergenic	novelGene_8600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAAGCA	NA	False	NA	NA	False	NA	NA	NA	20226454	20226256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20226300_20226500
ES.10237.2	chr14	-	3527	4	NIC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	17	0	intron_retention	FALSE	canonical	3	94	junction_2	12.9614813968157	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231860	20190124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20192526_20194702_20195191_20196568_20196681_20231334
ES.10237.4	chr14	-	4741	4	NIC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	28	-1	intron_retention	FALSE	canonical	3	118	junction_3	3.09120616516523	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTGTGGTATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	20231849	20190125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20192526_20194702_20194872_20195023_20196681_20231334
ES.10237.5	chr14	-	3056	5	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	-4261	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.0508325103519	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTGTGGTATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	20199623	20190125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20199415
ES.10237.6	chr14	-	3326	5	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.7795138586146	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTGTGGTATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	20231849	20190125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20192526_20194702_20194872_20195060_20195191_20196568_20196681_20231334
ES.10237.9	chr14	-	2229	6	NNC	ENSMUSG00000023243.10	novel	3392	5	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.4484983956289	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTGTGGTATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	20231847	20190126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20190834_20191964_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
ES.10238.1	chr14	+	335	1	Intergenic	novelGene_8601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATATTGCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	20236160	20236495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20236200_20236500
ES.10239.1	chr14	+	2683	1	Genic_Genomic	ENSMUSG00000114439.2	novel	NA	NA	NA	NA	-509	-3750	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	20265060	20267743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_20265100_20267700
ES.10239.2	chr14	+	3959	1	Genic_Genomic	ENSMUSG00000114439.2	novel	NA	NA	NA	NA	2131	166	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCCGTTCCAAAGGCAT	NA	False	NA	NA	False	TTTAAA	-2	NA	20267700	20271659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_20267700_20271700
ES.1024.1	chr1	-	1500	1	Antisense	novelGene_ENSMUSG00000034292.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCCTCCCACAAAGGCG	2065	False	NA	NA	False	NA	NA	NA	91457230	91455730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_91455700_91457200
ES.10240.1	chr14	-	3251	2	Antisense	novelGene_ENSMUSG00000114439.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAAAGGGGG	2127	False	NA	NA	False	NA	NA	NA	20267137	20263846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20264784_20264823
ES.10241.1	chr14	+	1876	10	NIC	ENSMUSG00000021809.11	novel	1633	10	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	5.20920363099157	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGTATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	20344773	20366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20345155_20345335_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.10	chr14	+	2663	10	NNC	ENSMUSG00000021809.11	novel	1589	10	NA	NA	0	-2	intron_retention	FALSE	canonical	2	2	junction_2	5.97732340280567	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTGTGAAGGTATATT	NA	False	NA	NA	False	NA	NA	NA	20344807	20366828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20344861_20345155_20345335_20350654_20350748_20354020_20354161_20356299_20356435_20357300_20357868_20359739_20359866_20360689_20360802_20361172_20361694_20366091
ES.10241.12	chr14	+	1342	5	ISM	ENSMUSG00000021809.11	ENSMUST00000223663.2	1633	10	12654	-27	-3139	-1	3prime_fragment	FALSE	canonical	3	14	junction_3	1.08972473588517	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGACTGATGAGATGC	9104	False	NA	NA	False	NA	NA	NA	20357418	20366591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.2	chr14	+	1730	9	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	4.29934588047996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTGTGAAGGTATATT	NA	False	NA	NA	False	NA	NA	NA	20344774	20366828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.3	chr14	+	1583	8	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3.04389653609465	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCGTGTGAAGGTATAT	NA	False	NA	NA	False	NA	NA	NA	20344788	20366827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.4	chr14	+	2539	9	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	4.29934588047996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTTCTTCTCCTCCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	20344788	20367651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.5	chr14	+	3051	8	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	-1	46	intron_retention	FALSE	canonical	2	6	junction_1	3.88087934491604	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGTGTGTATGTCTC	NA	False	NA	NA	False	NA	NA	NA	20344788	20366876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.6	chr14	+	1865	11	NNC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.9194594347795	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTGTGAAGGTATATT	NA	False	NA	NA	False	NA	NA	NA	20344789	20366828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689_20360802_20361172_20361230_20361538_20361694_20366091
ES.10241.7	chr14	+	2135	9	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	0	-2	intron_retention	FALSE	canonical	2	6	junction_1	4.18330013267038	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGTGTGAAGGTATATT	NA	False	NA	NA	False	NA	NA	NA	20344790	20366828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357300_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10241.8	chr14	+	1943	11	NNC	ENSMUSG00000021809.11	novel	1589	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.66408283261845	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCGTGTGAAGGTATAT	NA	False	NA	NA	False	NA	NA	NA	20344790	20366827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20344861_20345155_20345335_20354020_20354161_20356299_20356435_20357300_20357433_20357760_20357868_20359739_20359866_20360689_20360802_20361172_20361224_20361538_20361694_20366091
ES.10241.9	chr14	+	2488	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	5	1	4	-1	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGACTCTTTTCTTCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	20344794	20367645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ES.10242.1	chr14	-	178	1	Intergenic	novelGene_8602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	20352392	20352214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20352200_20352400
ES.10243.1	chr14	+	1950	8	ISM	ENSMUSG00000039599.17	ENSMUST00000051915.7	1981	12	-69	7086	-9	116	5prime_fragment	FALSE	canonical	3	59	junction_5	87.5522001728229	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTACTTGTCCATGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	20398220	20426471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577
ES.10243.10	chr14	+	3814	14	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	8	1359	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	91.380147520929	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGACCTTTGTCATTTC	NA	False	NA	NA	False	AATAAA	-42	NA	20398237	20434918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402906_20404839_20405037_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.11	chr14	+	2707	6	FSM	ENSMUSG00000039599.17	ENSMUST00000224930.2	2716	6	10	-1	10	1	multi-exon	FALSE	canonical	3	59	junction_5	79.7004391455907	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGTTAAATGTTCTCC	NA	False	NA	8	True	NA	NA	NA	20398239	20415313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330
ES.10243.12	chr14	+	1812	7	ISM	ENSMUSG00000039599.17	ENSMUST00000090503.12	2053	12	-88	7090	10	114	5prime_fragment	FALSE	canonical	3	15	junction_4	94.4694248009493	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398239	20426469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20413330_20413519_20424397_20424523_20425577
ES.10243.13	chr14	+	4668	14	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	10	8	intron_retention	FALSE	canonical	0	0	junction_7	95.2522654997782	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTTTAGATGTATTTT	NA	False	NA	19	True	AATAAA	-28	NA	20398239	20433567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20419711_20419791_20424397_20424523_20425577_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.14	chr14	+	2196	10	NNC	ENSMUSG00000039599.17	novel	2151	14	NA	NA	-10	114	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	82.0799068658774	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398241	20426469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913_20418021_20424397_20424523_20425577
ES.10243.15	chr14	+	1793	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-85	2775	-9	500	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTTCTTTAATATT	NA	False	NA	17	True	NA	NA	NA	20398242	20418635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
ES.10243.16	chr14	+	2410	14	FSM	ENSMUSG00000039599.17	ENSMUST00000090499.13	2370	14	-43	3	-5	-1	multi-exon	FALSE	canonical	3	48	junction_9	83.3254828649349	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTTATTACATTTT	NA	False	NA	8	True	AATAAA	-17	NA	20398246	20433556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.17	chr14	+	6266	10	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	73	junction_8	77.0194780558788	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398249	20433559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20428952_20431816_20431890_20432984
ES.10243.19	chr14	+	2139	12	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	73.4740073227677	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398251	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.2	chr14	+	1648	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-8	496	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398221	20418631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
ES.10243.20	chr14	+	1636	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	1	496	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	87.7415712951012	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398252	20418631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20408091_20408209_20409822_20409985_20413330_20413519_20417913
ES.10243.21	chr14	+	2967	8	NNC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.820870354471	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGCACCAGTTAAATG	NA	False	NA	2	True	NA	NA	NA	20398252	20415307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413054_20413172_20413330
ES.10243.22	chr14	+	2588	15	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.8264778852828	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	False	NA	2	True	AATAAA	-11	NA	20398259	20433550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20404839_20405037_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.23	chr14	+	1194	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-68	7752	2	-1654	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTTCTGCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	20398259	20413658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
ES.10243.24	chr14	+	4697	9	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	2	-4	intron_retention	FALSE	canonical	2	6	junction_1	102.208656066891	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTCTTTATTACAT	NA	False	NA	5	True	AATAAA	-14	NA	20398259	20433553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398315_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20424397_20424523_20425577_20428952_20431816_20431890_20432984
ES.10243.25	chr14	+	4959	12	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	70	junction_9	79.7026498724742	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398261	20433559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.26	chr14	+	3736	15	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	5	1334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.7216468075571	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAATGGAGTCATTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	20398262	20434893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398315_20401423_20401485_20402771_20402908_20404839_20405037_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.27	chr14	+	2555	16	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	94.4689484551523	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398264	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913_20418021_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20429465_20429521_20431816_20431890_20432984
ES.10243.28	chr14	+	1951	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	-24	6989	8	0	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTGGCTCACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20398265	20426355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
ES.10243.29	chr14	+	1136	8	NNC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	86.4754300365138	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGCACCAGTTAAATG	NA	False	NA	2	True	NA	NA	NA	20398266	20415307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20415218
ES.10243.3	chr14	+	1828	8	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-8	496	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	84.7177787764548	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398221	20418631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401361_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
ES.10243.30	chr14	+	1485	6	FSM	ENSMUSG00000039599.17	ENSMUST00000037698.13	924	6	-66	-495	9	495	multi-exon	FALSE	canonical	3	15	junction_4	92.6792317620296	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAATATGTTCTTTA	NA	False	NA	12	True	NA	NA	NA	20398266	20418630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20413330_20413519_20417913
ES.10243.31	chr14	+	1973	12	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	96.8976626384424	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398269	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20424397_20424523_20425577_20425682_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.32	chr14	+	5853	7	NNC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	12	497	intron_retention	TRUE	non_canonical	0	0	junction_3	109.572527984385	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAATATGTTCTTTAAT	NA	False	NA	14	True	NA	NA	NA	20398269	20418632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402997_20403123_20405392_20406053_20408209_20413330_20413519_20417913
ES.10243.33	chr14	+	1302	5	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	16	495	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	120.400114202604	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAATATGTTCTTTA	NA	False	NA	12	True	NA	NA	NA	20398273	20418630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20402771_20402908_20406422_20406566_20408091_20408209_20417913
ES.10243.34	chr14	+	2252	10	NNC	ENSMUSG00000039599.17	novel	2151	14	NA	NA	16	114	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	102.060983948052	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398273	20426469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402906_20404839_20405037_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
ES.10243.35	chr14	+	1992	12	NIC	ENSMUSG00000039599.17	novel	1981	12	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	91.8154815084477	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTTCTTTATTACATT	NA	False	NA	6	True	AATAAA	-15	NA	20398273	20433554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.36	chr14	+	5132	11	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	16	0	intron_retention	FALSE	canonical	3	14	junction_7	91.8130709648686	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398273	20433559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913_20418021_20424397_20424523_20425577_20428952_20431816_20431890_20432984
ES.10243.37	chr14	+	2438	15	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	93.6131858844072	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398274	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20429465_20429521_20431816_20431890_20432984
ES.10243.38	chr14	+	2771	7	NNC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.226211352284	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACAGCACCAGTTAAA	NA	False	NA	0	True	NA	NA	NA	20398283	20415305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401423_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20413330
ES.10243.41	chr14	+	1583	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	8	489	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	101.144561011565	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTAGTCTGAATATGT	NA	False	NA	6	True	NA	NA	NA	20398297	20418624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401361_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
ES.10243.43	chr14	+	2134	13	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	86.6052667118012	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398298	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.44	chr14	+	5014	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-29	3893	-8	-618	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGGAAAGTTCCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	20398298	20417517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
ES.10243.45	chr14	+	1382	6	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-7	496	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	100.594234427227	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398299	20418631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20417913
ES.10243.46	chr14	+	5557	12	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	-3	-7	intron_retention	FALSE	canonical	0	0	junction_2	82.3611277964358	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	False	NA	2	True	AATAAA	-11	NA	20398303	20433550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20406422_20406566_20408091_20408209_20409822_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.47	chr14	+	4671	15	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_12	95.4691156385997	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTTATTACATTTT	NA	False	NA	8	True	AATAAA	-17	NA	20398308	20433556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913_20418021_20424397_20424523_20425577_20428068_20428467_20428592_20428831_20428952_20429465_20429521_20431816_20431890_20432984
ES.10243.48	chr14	+	5014	13	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_8	84.6264668344891	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398311	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913_20418021_20424397_20424523_20425577_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.49	chr14	+	1985	12	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	5	-11	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	94.976987208342	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAACTTTAAGTTCTTT	NA	False	NA	-2	True	AATAAA	-7	NA	20398311	20433546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.5	chr14	+	8012	7	NNC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	-1	495	intron_retention	FALSE	canonical	1	2	junction_6	93.2781086619768	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAATATGTTCTTTA	NA	False	NA	12	True	NA	NA	NA	20398228	20418630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20415218
ES.10243.51	chr14	+	1987	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	54	6875	1	114	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGTACTTGTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	20398343	20426469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
ES.10243.52	chr14	+	2743	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	43	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	89.1714951963662	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTAAATGTTCTCCTC	NA	False	NA	10	True	NA	NA	NA	20398385	20415315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20398463_20401361_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
ES.10243.53	chr14	+	600	1	Intergenic	novelGene_8604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAACCAAAATATGATTA	NA	False	NA	NA	False	AATGAA	-9	NA	20405058	20405658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20405100_20405700
ES.10243.54	chr14	+	3426	1	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	6277	1117	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGCTTGAAATTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	20415826	20419252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20415800_20419300
ES.10243.55	chr14	+	4917	3	FSM	ENSMUSG00000039599.17	ENSMUST00000223898.2	420	3	-2654	-1843	-2090	1333	multi-exon	FALSE	canonical	3	73	junction_1	2	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAATGGAGTCATTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	20426015	20434892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20428952_20431816_20431890_20432984
ES.10243.56	chr14	+	3584	1	NIC	ENSMUSG00000039599.17	novel	1981	12	NA	NA	1297	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	False	NA	2	True	AATAAA	-11	NA	20429966	20433550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20430000_20433600
ES.10243.6	chr14	+	5332	12	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_8	89.6041800972984	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTTATTACATTTTA	NA	False	NA	9	True	AATAAA	-18	NA	20398231	20433557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913_20418021_20424397_20424523_20425577_20428952_20431816_20431890_20432984
ES.10243.7	chr14	+	1622	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	-52	7346	8	176	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAGACCGTTTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	20398237	20425998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
ES.10243.8	chr14	+	2103	13	NNC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	84.7155370768681	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	False	NA	2	True	AATAAA	-11	NA	20398237	20433550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20398315_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ES.10243.9	chr14	+	2883	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-90	6085	8	13	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCTCTGTTAGAGTT	NA	False	NA	20	True	NA	NA	NA	20398237	20415325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
ES.10244.1	chr14	+	3289	1	Antisense	novelGene_ENSMUSG00000021811.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGGGCGCCTGCGTC	NA	False	NA	NA	False	NA	NA	NA	20435655	20438944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_20435700_20438900
ES.10245.1	chr14	-	3472	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	-377	-14	377	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGGGGAGCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	20398152	20369542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.10	chr14	-	2552	13	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	6	-401	combination_of_known_junctions	FALSE	canonical	2	24	junction_11	141.925939215572	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCAGTCTGTGACATT	NA	False	NA	-2	True	AATAGA	-15	NA	20398128	20370320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20396678_20396890_20397861
ES.10245.16	chr14	-	5925	13	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	17	-408	intron_retention	FALSE	canonical	3	477	junction_7	32.1432341247734	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTAGTGTTCAGTCTG	NA	False	NA	-9	True	AATAGA	-8	NA	20398101	20370327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.17	chr14	-	2509	15	NNC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	-14	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.50192528843	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTAGTGTTCAGTCTG	NA	False	NA	-9	True	AATAGA	-8	NA	20398152	20370327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20370543_20370721_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380109_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.18	chr14	-	2472	13	NNC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	57	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	148.12914316756	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTAGTGTTCAGTCT	NA	False	NA	-10	True	AATAGA	-7	NA	20398061	20370328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379012_20383387_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.20	chr14	-	2907	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	-289	514	-289	-514	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGAATATTCAGTTTC	NA	False	NA	-7	True	AGTAAA	-26	NA	20398478	20370433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.21	chr14	-	3594	13	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	-2	-523	intron_retention	FALSE	canonical	3	477	junction_8	30.5435708819749	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTGTAATTCTGAATA	NA	False	NA	-16	True	AGTAAA	-17	NA	20398120	20370442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.22	chr14	-	2313	14	NNC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	376	-525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	140.043104099835	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGGTGTAATTCTGAA	NA	False	NA	-18	True	AGTAAA	-15	NA	20397742	20370444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397708
ES.10245.23	chr14	-	2435	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	23	674	23	-674	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATCTGTCTTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	20398166	20370593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.25	chr14	-	2279	13	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	6	-674	combination_of_known_junctions	FALSE	canonical	2	24	junction_11	141.925939215572	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATCTGTCTTCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	20398128	20370593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20396678_20396890_20397861
ES.10245.26	chr14	-	2235	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	101	796	30	-796	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGACAGAGGCAGGCGGA	NA	False	NA	NA	False	AATAAA	-37	NA	20398088	20370715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.27	chr14	-	157	1	Intergenic	novelGene_8603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGTTGTGTT	1036	False	NA	NA	False	NA	NA	NA	20377827	20377670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20377700_20377800
ES.10245.28	chr14	-	3782	7	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	13644	-14	1303	5prime_fragment	FALSE	canonical	3	477	junction_1	39.4859327975026	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGTAACATAATAAAAAT	NA	False	NA	NA	False	AAGAAA	-42	NA	20398152	20383563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.29	chr14	-	3541	6	NNC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	-2	1275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.458428252118	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-14	NA	20398120	20383591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20386266_20386949_20387143_20388476_20388565_20393323_20393442_20396678_20396888_20397861
ES.10245.3	chr14	-	3094	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	37	1	-14	-1	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTGCTTCCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	20398152	20369920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.30	chr14	-	11000	2	NNC	ENSMUSG00000021810.4	novel	389	2	NA	NA	3	365	intron_retention	FALSE	non_canonical	0	0	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTTAGTGCTCC	NA	False	NA	NA	False	NA	NA	NA	20398131	20386711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20393953_20394372
ES.10245.31	chr14	-	2894	3	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	70	21097	-1	2309	5prime_fragment	FALSE	canonical	3	536	junction_1	28	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAACCAAGAAT	NA	False	NA	NA	False	NA	NA	NA	20398119	20391016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20393442_20396678_20396890_20397861
ES.10245.4	chr14	-	3207	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	-362	287	-362	-287	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGGTACTTGCTTGG	NA	False	NA	NA	False	ATTAAA	-39	NA	20398551	20370206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.5	chr14	-	2765	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	-32	399	-32	-399	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTCTGTGACATTCT	NA	False	NA	0	True	AATAGA	-17	NA	20398221	20370318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10245.7	chr14	-	6271	11	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	1562	-401	intron_retention	FALSE	canonical	3	477	junction_7	26.3258428165178	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCAGTCTGTGACATT	797	False	NA	-2	True	AATAGA	-15	NA	20396556	20370320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323
ES.10245.8	chr14	-	2569	15	NNC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	-3	-401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.101504373428	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCAGTCTGTGACATT	NA	False	NA	-2	True	AATAGA	-15	NA	20398121	20370320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20370620_20370713_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ES.10246.1	chr14	-	4745	1	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGTGCTATGGTGCA	NA	False	NA	NA	False	NA	NA	NA	20404437	20399692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20399700_20404400
ES.10246.2	chr14	-	3318	3	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTGTGCTATGGTG	NA	False	NA	NA	False	NA	NA	NA	20404437	20399694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20401483_20402769_20403023_20403160
ES.10246.3	chr14	-	4565	2	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20404437	20399734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20403023_20403160
ES.10246.4	chr14	-	3009	2	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20404436	20399737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20402396_20404085
ES.10247.1	chr14	-	266	1	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAAGGGTTTGTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	20421491	20421225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20421200_20421500
ES.10248.1	chr14	-	3941	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	64	-2374	-25	2374	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTATGCATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	20438914	20432331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ES.10248.10	chr14	-	3811	3	FSM	ENSMUSG00000021811.8	ENSMUST00000223950.2	1164	3	-44	-2603	-10	-221	multi-exon	FALSE	canonical	3	933	junction_1	10.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGTGGATTATTTAAAT	NA	False	NA	-15	True	AATAAA	-16	NA	20438988	20434926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20438280_20438367_20438509_20438671
ES.10248.11	chr14	-	3604	3	NIC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	4	-222	intron_retention	FALSE	canonical	3	933	junction_2	65	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGGTGGATTATTTAAA	NA	False	NA	-16	True	AATAAA	-15	NA	20438940	20434927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20435547_20435867_20438280_20438367
ES.10248.12	chr14	-	1231	5	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	4	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	424.708355816082	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGTCTGGTGGATTAT	NA	False	NA	-21	True	AATAAA	-10	NA	20438940	20434932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435547_20435867_20435955_20438024_20438145_20438367_20438509_20438671
ES.10248.13	chr14	-	4531	6	Fusion	ENSMUSG00000021811.8_ENSMUSG00000049960.5	novel	1631	5	NA	NA	1	-227	intron_retention	FALSE	canonical	3	896	junction_2	332.401203367256	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGTCTGGTGGATTAT	8528	False	NA	-21	True	AATAAA	-10	NA	20443701	20434932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20441529_20441960_20442222_20443548
ES.10248.14	chr14	-	1369	5	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	3	-227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	424.708355816082	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGTCTGGTGGATTAT	NA	False	NA	-21	True	AATAAA	-10	NA	20438941	20434932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435547_20435867_20435955_20438024_20438282_20438367_20438509_20438671
ES.10248.15	chr14	-	1149	4	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	-9	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	444.852784637795	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACAAAGGTCTGGTG	NA	False	NA	-27	True	AATAAA	-4	NA	20438987	20434938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435409_20438057_20438280_20438367_20438509_20438671
ES.10248.17	chr14	-	1337	5	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	11	-243	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	426.925344761821	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAGAAATGACAA	NA	False	NA	-37	True	NA	NA	NA	20438933	20434948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435547_20435867_20435949_20438024_20438280_20438367_20438509_20438671
ES.10248.19	chr14	-	3451	5	FSM	ENSMUSG00000021811.8_ENSMUSG00000049960.5	ENSMUST00000022345.7	1631	5	-2155	335	-2155	257	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTACTGTTAGGTTT	NA	False	NA	-129	True	AATAAA	-45	NA	20441133	20435040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ES.10248.2	chr14	-	4235	1	Genic_Genomic	ENSMUSG00000021811.8	novel	NA	NA	NA	NA	1903	2374	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTATGCATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	20436566	20432331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_20432300_20436600
ES.10248.20	chr14	-	3313	4	NIC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	3	241	intron_retention	FALSE	canonical	3	933	junction_2	56.9814784722974	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGATCTTCTTTTCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	20438941	20435056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20435547_20435867_20438280_20438367_20438509_20438671
ES.10248.21	chr14	-	982	4	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	5	240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	444.852784637795	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGGATCTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-28	NA	20438939	20435057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435409_20438057_20438280_20438367_20438509_20438671
ES.10248.22	chr14	-	965	2	NNC	ENSMUSG00000021811.8	novel	781	3	NA	NA	4	240	intron_retention	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGGATCTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-28	NA	20438940	20435057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435409_20438326
ES.10248.23	chr14	-	7616	4	Fusion	ENSMUSG00000021811.8_ENSMUSG00000049960.5	novel	1631	5	NA	NA	28	231	intron_retention	FALSE	canonical	3	933	junction_2	321.663730556548	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATCCTACACGGATCT	8706	False	NA	NA	False	AATAAA	-19	NA	20443523	20435066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_20435547_20435867_20438280_20438367_20441529_20441960
ES.10248.24	chr14	-	767	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	-94	1899	-94	24	multi-exon	FALSE	canonical	3	1591	junction_2	40	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGTCAGACAGAGGT	8433	False	NA	-12	True	AATAAA	-38	NA	20443796	20441270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20441529_20441960_20442222_20443548
ES.10248.25	chr14	-	1852	2	ISM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	-24	-3	-24	3	intron_retention	FALSE	canonical	3	1671	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTCCTCTGGCATAGCCT	8654	False	NA	-33	True	AATAAA	-17	NA	20443575	20441291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20441529_20441960
ES.10248.26	chr14	-	864	3	FSM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	-61	-2	-61	2	multi-exon	FALSE	canonical	3	91	junction_2	790	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCCTCTGGCATAGCC	8617	False	NA	-34	True	AATAAA	-16	NA	20443612	20441292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20441529_20441960_20442222_20443245
ES.10248.28	chr14	-	1651	3	NNC	ENSMUSG00000049960.5	novel	801	3	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	834	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACGGTCCTCTGGCAT	8662	False	NA	-38	True	AATAAA	-12	NA	20443567	20441296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20441529_20441960_20442222_20442409
ES.10248.29	chr14	-	907	4	NNC	ENSMUSG00000049960.5	novel	801	3	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	787.010800434149	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACGGTCCTCTGGCAT	8677	False	NA	-38	True	AATAAA	-12	NA	20443552	20441296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20441529_20441960_20442222_20442409_20442517_20443245
ES.10248.3	chr14	-	3093	4	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	3	1778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	444.852784637795	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACATGCCGTGGACTTT	NA	False	NA	NA	False	AATAAA	-2	NA	20438941	20432927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20435382_20438051_20438280_20438367_20438509_20438671
ES.10248.31	chr14	-	1940	1	NIC	ENSMUSG00000049960.5	novel	2572	3	NA	NA	5	-463	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGGACAACTGT	8532	False	NA	NA	False	NA	NA	NA	20443697	20441757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20441800_20443700
ES.10248.4	chr14	-	2680	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	217	-1266	128	1266	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCAGTGATCTGAATCA	NA	False	NA	NA	False	TATAAA	-13	NA	20438761	20433439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ES.10248.5	chr14	-	1592	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	37	2	3	-2	multi-exon	FALSE	canonical	3	896	junction_2	62.1711347813437	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTTATGTGTTTTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	20438941	20434707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ES.10248.6	chr14	-	4287	7	Fusion	ENSMUSG00000021811.8_ENSMUSG00000049960.5	novel	1631	5	NA	NA	-51	-209	multi-exon	TRUE	canonical	3	896	junction_2	320.494756414031	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATGACTCCATTGGT	8627	False	NA	-3	True	AATAAA	-28	NA	20443602	20434914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671_20441529_20441960_20442222_20443548
ES.10248.7	chr14	-	3128	4	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	-26	-218	intron_retention	FALSE	canonical	1	1	junction_1	444.381467760402	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGATTATTTAAATGAC	NA	False	NA	-12	True	AATAAA	-19	NA	20438915	20434923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20437412_20438024_20438280_20438367_20438509_20438671
ES.10248.8	chr14	-	3406	4	NIC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	-14	-220	intron_retention	FALSE	canonical	3	933	junction_2	56.9814784722974	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGGATTATTTAAATG	NA	False	NA	-14	True	AATAAA	-17	NA	20438903	20434925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20435547_20435867_20438280_20438367_20438509_20438671
ES.10248.9	chr14	-	4038	1	NIC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	15	-220	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGGATTATTTAAATG	NA	False	NA	-14	True	AATAAA	-17	NA	20438963	20434925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20434900_20439000
ES.10249.1	chr14	-	3692	29	NIC	ENSMUSG00000039543.17	novel	3615	29	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	0.7319250547114	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCATGTTTCTGGAGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	20502305	20444260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20444470_20444700_20444749_20444981_20445084_20447250_20447341_20450424_20450587_20451157_20451311_20453136_20453259_20454165_20454325_20454655_20454725_20458536_20458750_20459134_20459251_20459368_20459503_20462414_20462541_20466564_20466697_20470692_20470888_20471142_20471204_20474440_20474533_20475207_20475289_20475429_20475598_20479462_20479598_20481991_20482092_20486790_20486886_20489732_20489916_20490691_20490872_20493670_20493751_20493928_20494028_20497502_20497690_20498622_20498788_20502269
ES.10249.2	chr14	-	3534	28	NIC	ENSMUSG00000039543.17	novel	3615	29	NA	NA	-11	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	0.738886568268889	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATATAAACCCCAAA	NA	False	NA	NA	False	NA	NA	NA	20502305	20444287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20444470_20444700_20444749_20444981_20445084_20447250_20447341_20450424_20450587_20451157_20451311_20453136_20453259_20454165_20454325_20458536_20458750_20459134_20459251_20459368_20459503_20462414_20462541_20466564_20466697_20470692_20470888_20471142_20471204_20474440_20474533_20475207_20475289_20475429_20475598_20479462_20479598_20481991_20482092_20486790_20486886_20489732_20489916_20490691_20490872_20493670_20493751_20493928_20494028_20497502_20497690_20498622_20498726_20502269
ES.1025.1	chr1	+	5989	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	-162	-1	8	1	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGCTCTCTAGCTCT	8793	False	NA	8	True	AATAAA	-20	NA	91468273	91487312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
ES.1025.10	chr1	+	178	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	91481490	91481668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_91481500_91481700
ES.1025.2	chr1	+	5372	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	-162	616	8	-616	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTAATTTTGTGGCCC	8793	False	NA	22	True	AATAAA	-31	NA	91468273	91486695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
ES.1025.6	chr1	+	1401	6	NIC	ENSMUSG00000026311.17	novel	5826	5	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.0751673029449	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTCTGTTTTGGA	8804	False	NA	NA	False	NA	NA	NA	91468284	91482836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_91468375_91468475_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
ES.1025.7	chr1	+	1047	4	FSM	ENSMUSG00000026311.17	ENSMUST00000190484.7	735	4	-22	-290	-4	-3	multi-exon	FALSE	canonical	1	2	junction_2	11.2644968324772	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTCTGTTTTGGA	8951	False	NA	NA	False	NA	NA	NA	91468431	91482836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91468587_91471877_91472020_91479775_91480162_91482472
ES.1025.8	chr1	+	2341	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	168	-19	-2	19	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAGTGTACCATTTTG	8953	False	NA	NA	False	CATAAA	-22	NA	91468433	91483829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
ES.1025.9	chr1	+	5935	6	NNC	ENSMUSG00000026311.17	novel	5826	5	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5705563629499	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGAGTGTCTGGCTC	8975	False	NA	-1	True	AATAAA	-11	NA	91468455	91487303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_91468587_91471872_91472020_91472092_91472230_91474649_91474953_91479775_91480162_91482472
ES.10250.1	chr14	+	178	1	Intergenic	novelGene_8605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACATACAAAT	NA	False	NA	NA	False	NA	NA	NA	20505126	20505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20505100_20505300
ES.10251.1	chr14	-	2777	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	57	17	45	0	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8035	False	NA	-1	True	AATAAA	-24	NA	20530144	20505344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.10	chr14	-	1679	12	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-1869	359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	274.723452232625	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8456	False	NA	-20	True	AATAAA	-17	NA	20523400	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521624_20523351
ES.10251.13	chr14	-	3436	13	NNC	ENSMUSG00000021814.18	novel	2727	13	NA	NA	33	359	intron_retention	FALSE	canonical	0	0	junction_3	381.615171198537	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8236	False	NA	-20	True	AATAAA	-17	NA	20529943	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512274_20512437_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ES.10251.17	chr14	-	1779	13	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	0	359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	266.939274721591	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8170	False	NA	-20	True	AATAAA	-17	NA	20530009	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506700_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.18	chr14	-	1840	12	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-13	359	intron_retention	FALSE	canonical	3	603	junction_11	125.510066765595	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8157	False	NA	-20	True	AATAAA	-17	NA	20530022	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20508751_20510226_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.19	chr14	-	3199	12	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-4	359	intron_retention	FALSE	canonical	3	603	junction_11	110.911475384204	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8196	False	NA	-20	True	AATAAA	-17	NA	20529983	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.2	chr14	-	4112	12	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	603	junction_11	110.911475384204	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8176	False	NA	-1	True	AATAAA	-24	NA	20530003	20505344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.20	chr14	-	1965	14	FSM	ENSMUSG00000021814.18	ENSMUST00000100844.6	2904	14	30	909	30	359	multi-exon	FALSE	canonical	2	9	junction_9	337.357184335068	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8020	False	NA	-20	True	AATAAA	-17	NA	20530159	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517525_20517592_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.22	chr14	-	3273	12	NIC	ENSMUSG00000021814.18	novel	2727	13	NA	NA	33	358	intron_retention	FALSE	canonical	3	93	junction_11	241.581292034704	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTGTTTAATGTTAAA	8236	False	NA	-21	True	AATAAA	-16	NA	20529943	20506238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ES.10251.23	chr14	-	4354	7	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-1604	358	intron_retention	FALSE	canonical	3	837	junction_4	58.0277711291949	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTGTTTAATGTTAAA	NA	False	NA	-21	True	AATAAA	-16	NA	20516618	20506238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911
ES.10251.24	chr14	-	5327	4	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-247	358	intron_retention	FALSE	canonical	3	852	junction_3	65.3214274866134	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTGTTTAATGTTAAA	NA	False	NA	-21	True	AATAAA	-16	NA	20515261	20506238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20513089_20514676_20514772_20514911
ES.10251.26	chr14	-	6332	9	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-1869	356	intron_retention	FALSE	canonical	3	720	junction_7	81.5405382309928	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTCTGTTTAATGTTA	8456	False	NA	-23	True	AATAAA	-14	NA	20523400	20506240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20519558_20521435
ES.10251.27	chr14	-	1731	13	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-5	349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	269.992733955729	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTCTAATTCTGTTT	8165	False	NA	-30	True	AATAAA	-7	NA	20530014	20506247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523355_20523398_20529962
ES.10251.28	chr14	-	902	1	Intergenic	novelGene_8606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20516438	20515536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20515500_20516400
ES.10251.3	chr14	-	2679	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	39	9	36	0	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCACAGCTCTTTTGA	8239	False	NA	-10	True	AATAAA	-15	NA	20529940	20505353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ES.10251.5	chr14	-	1961	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	28	862	16	407	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACGCTGTTCTGGTTG	8006	False	NA	28	True	NA	NA	NA	20530173	20506189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.6	chr14	-	3213	12	NIC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-10	361	intron_retention	FALSE	canonical	3	603	junction_11	125.395704251095	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8160	False	NA	-18	True	AATAAA	-19	NA	20530019	20506235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.7	chr14	-	1742	13	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	2	360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	273.099328185837	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTTTAATGTTAAAAG	8172	False	NA	-19	True	AATAAA	-18	NA	20530007	20506236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514766_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ES.10251.8	chr14	-	1927	13	NNC	ENSMUSG00000021814.18	novel	2851	13	NA	NA	-7	359	intron_retention	FALSE	canonical	0	0	junction_11	350.235188837444	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8193	False	NA	-20	True	AATAAA	-17	NA	20529986	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20506670_20508637_20508751_20510226_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20525987_20526111_20529962
ES.10251.9	chr14	-	1864	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	-30	893	0	359	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTTTAATGTTAAAA	8170	False	NA	-20	True	AATAAA	-17	NA	20530009	20506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ES.10252.1	chr14	+	173	1	Intergenic	novelGene_8607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTATGAC	NA	False	NA	NA	False	NA	NA	NA	20532361	20532534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20532400_20532500
ES.10253.1	chr14	-	2601	7	FSM	ENSMUSG00000021815.5	ENSMUST00000022353.5	1826	7	-772	-3	-772	3	multi-exon	FALSE	canonical	1	1	junction_1	0.372677996249965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAACATTACCAGACTC	NA	False	NA	NA	False	AATAAA	-18	NA	20547741	20532931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214_20536340_20537092_20537249_20537511_20537754_20546702
ES.10253.2	chr14	-	1667	2	ISM	ENSMUSG00000021815.5	ENSMUST00000022353.5	1826	7	12058	2	12058	-2	intron_retention	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGTTAACATTACCA	9781	False	NA	NA	False	AATAAA	-13	NA	20534911	20532936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20533310_20533617
ES.10254.1	chr14	+	177	1	Intergenic	novelGene_8608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAAACCTATTCATT	NA	False	NA	NA	False	NA	NA	NA	20594731	20594908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20594700_20594900
ES.10255.1	chr14	-	3861	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-7	-556	-7	52	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTTATGAAAATTAC	NA	False	NA	50	True	TATAAA	-20	NA	20596622	20549379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.10	chr14	-	3669	13	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.1480129146734	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCATTAGCTGTCTCTA	NA	False	NA	-9	True	ATTAAA	-9	NA	20596622	20549438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574160_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.11	chr14	-	3481	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	6	-189	6	189	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTTAGAAGAGATGT	NA	False	NA	1	True	AATAAA	-19	NA	20596609	20549746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.12	chr14	-	3380	13	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	11	189	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	69.3253200497481	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTTAGAAGAGATGT	NA	False	NA	1	True	AATAAA	-19	NA	20596630	20549746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.13	chr14	-	6769	1	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	-2679	187	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGGGTTAGAAGAGAT	NA	False	NA	-1	True	AATAAA	-17	NA	20556517	20549748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20549700_20556500
ES.10255.15	chr14	-	6174	13	NIC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	11	187	intron_retention	FALSE	canonical	3	82	junction_1	51.0138189339146	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGGGTTAGAAGAGAT	NA	False	NA	-1	True	AATAAA	-17	NA	20596630	20549748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20581137_20581727_20581929_20596423
ES.10255.17	chr14	-	3596	15	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	-13	186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.0647752986845	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTCTGGGTTAGAAGAGA	NA	False	NA	-2	True	AATAAA	-16	NA	20596593	20549749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20553314_20553345_20556548_20556683_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.18	chr14	-	5102	2	FSM	ENSMUSG00000021816.12	ENSMUST00000162217.2	635	2	-2712	-1755	-2712	71	multi-exon	FALSE	canonical	3	82	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATTTTCCAAAATATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	20556550	20549864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314
ES.10255.20	chr14	-	3294	13	NIC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	9	9	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	55.7529271777625	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTATACTTTTTTAT	NA	False	NA	NA	False	CATAAA	-19	NA	20596632	20549926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.21	chr14	-	3288	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	48	495	-13	9	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTATACTTTTTTAT	NA	False	NA	NA	False	CATAAA	-19	NA	20596593	20549926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.22	chr14	-	3179	13	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	4	7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	69.3253200497481	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGTTATACTTTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	20596611	20549928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.23	chr14	-	3306	14	NNC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	65.8989723456521	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAACTTTTGTTATACTT	NA	False	NA	NA	False	CATAAA	-13	NA	20596623	20549932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573737_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.24	chr14	-	3147	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	19	665	-7	1	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596622	20550096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.26	chr14	-	3114	13	NIC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	55.7529271777625	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTTGGGTTTTATT	NA	False	NA	0	True	AATAAA	-26	NA	20596622	20550096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.27	chr14	-	2994	12	NIC	ENSMUSG00000021816.12	novel	3074	13	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	76.1327678933811	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596625	20550097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.28	chr14	-	3037	13	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	69.3253200497481	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596638	20550097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.3	chr14	-	7743	2	FSM	ENSMUSG00000021816.12	ENSMUST00000162217.2	635	2	-4920	-2188	-4920	0	multi-exon	FALSE	canonical	3	82	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTGTCTCTAAAATTAC	NA	False	NA	-2	True	ATTAAA	-16	NA	20558758	20549431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314
ES.10255.30	chr14	-	3043	14	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	68.9140619104264	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596268	20550097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596169
ES.10255.33	chr14	-	6562	13	NNC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	-7650	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	70.8735180131166	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTCTGTGTTGGGTTTT	NA	False	NA	-3	True	AATAAA	-23	NA	20581761	20550099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20566837_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727
ES.10255.34	chr14	-	3007	13	NNC	ENSMUSG00000021816.12	novel	3074	13	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	72.1519904245352	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTATCTCTGTGTTGGGT	NA	False	NA	-6	True	AATAAA	-20	NA	20596524	20550102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573737_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.35	chr14	-	2764	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	11	1056	11	-390	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAGCCTAGAAGCAATG	NA	False	NA	NA	False	ATTAAA	-28	NA	20596630	20550487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.36	chr14	-	2253	9	NIC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	3	-412	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	87.0039510597076	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATGTTTTTGACTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	20596612	20550509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.37	chr14	-	2442	12	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	-16	7803	10	0	5prime_fragment	FALSE	canonical	3	105	junction_2	32.0745515869534	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	-7	True	AATAAA	-19	NA	20596631	20557738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.38	chr14	-	5635	11	ISM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	11182	0	11182	0	3prime_fragment	FALSE	canonical	3	102	junction_2	34.294168600507	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	-7	True	AATAAA	-19	NA	20585326	20557738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727
ES.10255.39	chr14	-	5028	11	NNC	ENSMUSG00000021816.12	novel	2322	12	NA	NA	221	-1	intron_retention	FALSE	canonical	0	0	junction_10	67.7967550845909	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTAATCTGGCTCGT	NA	False	NA	-8	True	AATAAA	-18	NA	20596287	20557739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20581137_20581727_20581929_20596169
ES.10255.4	chr14	-	6568	5	ISM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	26994	1	-772	-1	3prime_fragment	FALSE	canonical	3	82	junction_1	53.0377224247045	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGCTGTCTCTAAAATTA	1560	False	NA	-3	True	ATTAAA	-15	NA	20569647	20549432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590
ES.10255.40	chr14	-	2293	11	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	83.6952208910401	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTAATCTGGCTCGT	NA	False	NA	-8	True	AATAAA	-18	NA	20596612	20557739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574164_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10255.42	chr14	-	2003	4	NNC	ENSMUSG00000021816.12	novel	2322	12	NA	NA	1248	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	86.1665054801845	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTAATCTGGCTCGT	3580	False	NA	-8	True	AATAAA	-18	NA	20567627	20557739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20558790_20559483_20559569_20565590_20565669_20566837
ES.10255.44	chr14	-	8591	8	NIC	ENSMUSG00000021816.12	novel	2322	12	NA	NA	-4910	-26	intron_retention	FALSE	canonical	3	191	junction_7	13.9357124551511	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAATTATACGT	NA	False	NA	-33	True	TATAAA	-21	NA	20579021	20557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20558790_20559483_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225
ES.10255.45	chr14	-	5040	4	ISM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	22139	7829	-365	-26	intron_retention	FALSE	canonical	3	105	junction_2	48.2562603883337	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAATTATACGT	NA	False	NA	-33	True	TATAAA	-21	NA	20574476	20557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621
ES.10255.46	chr14	-	2379	12	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	10	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.8713759779072	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAATTATACGT	NA	False	NA	-33	True	TATAAA	-21	NA	20596605	20557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573914_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.48	chr14	-	1248	1	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	11	-24707	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAACCCTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	20596630	20595382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20595400_20596600
ES.10255.6	chr14	-	3703	13	NNC	ENSMUSG00000021816.12	novel	3298	14	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	72.6370352429729	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGCTGTCTCTAAAATTA	NA	False	NA	-3	True	ATTAAA	-15	NA	20596543	20549432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20551731_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574023_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ES.10255.7	chr14	-	2407	3	NIC	ENSMUSG00000021816.12	novel	3074	13	NA	NA	469	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGCTGTCTCTAAAATT	5592	False	NA	-4	True	ATTAAA	-14	NA	20565615	20549433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20559483_20559569_20565590
ES.10255.9	chr14	-	3603	13	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	-35	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	69.3253200497481	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTAGCTGTCTCTAAA	NA	False	NA	-7	True	ATTAAA	-11	NA	20596543	20549436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
ES.10256.1	chr14	+	1414	1	Antisense	novelGene_ENSMUSG00000034235.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTATT	NA	False	NA	NA	False	AATAAA	-19	NA	20635720	20637134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_20635700_20637100
ES.10257.1	chr14	+	170	1	Intergenic	novelGene_8610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTAAAAAATAAA	4480	False	NA	NA	False	NA	NA	NA	20687234	20687404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20687200_20687400
ES.10258.1	chr14	+	2224	1	FSM	ENSMUSG00000099966.2	ENSMUST00000190699.2	3040	1	-7	823	-7	-823	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCAGTCTATCCAGAG	2584	False	NA	NA	False	NA	NA	NA	20691069	20693293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20691100_20693300
ES.10258.2	chr14	+	570	2	Genic_Genomic	ENSMUSG00000099966.2	novel	3040	1	NA	NA	-2	-856	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGGAAAAAA	2589	False	NA	NA	False	NA	NA	NA	20691074	20693260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_20691599_20693214
ES.10258.3	chr14	+	2999	1	FSM	ENSMUSG00000099966.2	ENSMUST00000190699.2	3040	1	11	30	11	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAATAAAAA	2602	False	NA	NA	False	NA	NA	NA	20691087	20694086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20691100_20694100
ES.10259.1	chr14	-	6522	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	58	0	58	0	multi-exon	FALSE	canonical	3	44	junction_20	12.721929885045	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20691073	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.10	chr14	-	6353	22	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	121	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.5724133688047	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691010	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600180_20600283_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.11	chr14	-	6542	22	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	120	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.1190382081672	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691011	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602139_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627523_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20668360_20668444_20690984
ES.10259.13	chr14	-	5716	15	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	127	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	21.6522846039726	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691004	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20654119_20654213_20657149_20657974_20690984
ES.10259.14	chr14	-	7323	20	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	127	-2	intron_retention	FALSE	canonical	0	0	junction_14	19.9453547101884	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691004	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638500_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.15	chr14	-	6524	22	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	23.2245276552023	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691011	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614466_20614533_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.16	chr14	-	6312	20	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	116	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	20.5464139122558	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691015	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.18	chr14	-	4422	12	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	30.1234375130613	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691011	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623973_20626540_20626773_20627002_20627194_20657872_20657974_20690984
ES.10259.20	chr14	-	6804	22	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	-141	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	23.6806991071649	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTCTTTTACTTT	NA	False	NA	0	True	AATAAA	-21	NA	20691272	20598981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20639895_20639981_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.21	chr14	-	6443	21	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	118	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.591207778391	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTTGTCTTTTACTT	NA	False	NA	-1	True	AATAAA	-20	NA	20691013	20598982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602298_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616146_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.22	chr14	-	6434	20	NIC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-2576	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	25.9034003479174	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTTGTCTTTTACTT	6611	False	NA	-1	True	AATAAA	-20	NA	20657974	20598982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ES.10259.23	chr14	-	11521	19	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-3	intron_retention	FALSE	canonical	3	44	junction_18	13.1370975992924	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTTGTCTTTTACTT	NA	False	NA	-1	True	AATAAA	-20	NA	20691011	20598982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.27	chr14	-	6219	21	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-2576	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3087415436636	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCTTGTCTTTTAC	6611	False	NA	-3	True	AATAAA	-18	NA	20657974	20598984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600180_20600389_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ES.10259.28	chr14	-	6288	20	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	119	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.302559095276	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCTTGTCTTTTAC	NA	False	NA	-3	True	AATAAA	-18	NA	20691012	20598984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.29	chr14	-	6659	22	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	86	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_12	21.0907766968883	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCTCTTGTCTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	20691045	20598985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.3	chr14	-	10160	19	NIC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-2117	0	intron_retention	TRUE	canonical	3	56	junction_4	11.4283867930412	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	7070	False	NA	2	True	AATAAA	-23	NA	20657515	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ES.10259.30	chr14	-	7311	19	NIC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	115	-6	intron_retention	FALSE	canonical	3	44	junction_18	10.8781125813871	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCTCTTGTCTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	20691016	20598985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.31	chr14	-	6551	21	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	680	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	19.130865113737	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCTCTTGTCTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	20690451	20598985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690327
ES.10259.33	chr14	-	6468	21	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.0136828195113	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691011	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616146_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.35	chr14	-	5262	2	ISM	ENSMUSG00000034235.18	ENSMUST00000035340.14	6495	21	62561	7	30267	-7	3prime_fragment	FALSE	canonical	3	87	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	9656	False	NA	-5	True	AATAAA	-16	NA	20605861	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20600529_20602141
ES.10259.36	chr14	-	6555	22	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	127	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	25.2622525894998	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691004	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641620_20654119_20654213_20657149_20657974_20690984
ES.10259.37	chr14	-	7629	24	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	123	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.7800213066843	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691008	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612145_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20631903_20631962_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20655931_20656017_20656118_20657974_20690984
ES.10259.38	chr14	-	7770	23	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-2576	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.4067639098297	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	6611	False	NA	-5	True	AATAAA	-16	NA	20657974	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627378_20627521_20627655_20631524_20631696_20631903_20631962_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20655931_20656017_20656118
ES.10259.39	chr14	-	3505	13	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.9791589103985	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691011	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20611149_20612041_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627178_20657872_20657974_20690984
ES.10259.4	chr14	-	6723	23	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	24.5629567229844	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20691045	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20631903_20631962_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.40	chr14	-	6418	21	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	128	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	27.725935511719	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691003	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614466_20614533_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20657149_20657974_20690984
ES.10259.41	chr14	-	6391	21	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	120	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.0556101876757	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATCTCTTGTCTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	20691011	20598986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641620_20654119_20654213_20657149_20657974_20690984
ES.10259.44	chr14	-	133	2	Intergenic	novelGene_8609	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	20688041	20608047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20608114_20687974
ES.10259.5	chr14	-	6079	20	NNC	ENSMUSG00000034235.18	novel	6580	21	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.2391135571989	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20691045	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627230_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ES.10259.6	chr14	-	5294	17	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-5484	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.2338173675861	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20641612	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616146_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546
ES.10259.8	chr14	-	6119	20	NNC	ENSMUSG00000034235.18	novel	6495	21	NA	NA	-2576	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.2675793312773	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	6611	False	NA	2	True	AATAAA	-23	NA	20657974	20598979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20620315_20620484_20623835_20623970_20626540_20626773_20627230_20627381_20627522_20627655_20631524_20631696_20631903_20631962_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ES.1026.1	chr1	-	162	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	91475254	91475092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_91475100_91475300
ES.10260.1	chr14	+	168	1	Intergenic	novelGene_8611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCACCTTTCT	NA	False	NA	NA	False	NA	NA	NA	20720370	20720538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20720400_20720500
ES.10261.1	chr14	+	160	1	Intergenic	novelGene_8612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-35	NA	20724029	20724189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20724000_20724200
ES.10262.1	chr14	+	4517	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	-56	0	-56	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724319	20744920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.10	chr14	+	2622	16	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	-404	intron_retention	FALSE	canonical	3	56	junction_6	100.113136001226	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCATTGTCACTGTCGT	NA	False	NA	NA	False	AATGAA	-36	NA	20724390	20741214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771
ES.10262.12	chr14	+	7161	1	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-1245	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGCAAAGACTATACCTA	NA	False	NA	NA	False	NA	NA	NA	20724391	20731552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724400_20731600
ES.10262.13	chr14	+	4464	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_20	77.904953746099	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTCATTACTCGCGA	NA	False	NA	14	True	AATAAA	-17	NA	20724391	20744919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742614_20742787_20742980_20743211_20743302_20743718
ES.10262.14	chr14	+	4460	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_6	77.7485351035233	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724391	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736558_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.15	chr14	+	3654	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	16	791	1	-789	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGTATATGATTCGGT	NA	False	NA	NA	False	AATGAA	-14	NA	20724391	20744129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.16	chr14	+	5567	2	FSM	ENSMUSG00000039367.12	ENSMUST00000224718.2	971	2	-11	-4585	2	-1269	multi-exon	FALSE	canonical	3	348	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20724392	20731528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20724457_20726025
ES.10262.17	chr14	+	9490	11	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_8	109.106415943335	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724392	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20733531_20733952_20736689_20736922_20737051_20738453_20738593_20738798_20740550_20740716_20742980_20743211_20743302_20743718
ES.10262.18	chr14	+	5022	20	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	3	-2	intron_retention	FALSE	canonical	3	291	junction_9	31.6897180035862	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724393	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.19	chr14	+	4635	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	3	0	intron_retention	FALSE	canonical	3	291	junction_9	30.4226464162141	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724393	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.20	chr14	+	4679	23	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	3	-1	intron_retention	FALSE	canonical	3	56	junction_6	87.6613506437941	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724393	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.21	chr14	+	4076	21	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	6	1	intron_retention	FALSE	canonical	0	0	junction_16	127.871067876983	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTCATTACTCGCGA	NA	False	NA	14	True	AATAAA	-17	NA	20724396	20744919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20742054_20742174_20742413_20742498_20742787_20742980_20743211_20743302_20743718
ES.10262.22	chr14	+	4798	20	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	6	-2	intron_retention	FALSE	canonical	3	291	junction_9	31.4617122099236	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724396	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.23	chr14	+	5977	21	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	56	junction_6	70.1861097368988	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724397	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.24	chr14	+	4442	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_9	77.6120890302301	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724397	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738600_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.25	chr14	+	4728	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1	junction_20	110.314501568009	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724400	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742614_20742787_20742980_20743211_20743302_20743718
ES.10262.26	chr14	+	4426	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_16	78.0184471722781	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724401	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741425_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.27	chr14	+	4678	20	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_13	83.3232200696185	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724403	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740886_20740943_20741333_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.28	chr14	+	4560	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	98.5648817623407	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724403	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.29	chr14	+	4135	23	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	0	1	intron_retention	FALSE	canonical	1	10	junction_4	76.1409632260568	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTCATTACTCGCGA	NA	False	NA	14	True	AATAAA	-17	NA	20724403	20744919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732844_20733376_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.3	chr14	+	4561	24	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	-33	0	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724342	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.30	chr14	+	4421	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	103.132196718581	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724403	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737045_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743722
ES.10262.31	chr14	+	4314	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_13	79.1686394312025	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724403	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.32	chr14	+	4890	23	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	56	junction_6	87.4363641089624	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724404	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.33	chr14	+	4921	20	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	297	junction_6	28.4521272615313	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724404	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.34	chr14	+	4302	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_7	79.5459051140168	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724404	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.35	chr14	+	3637	24	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	1	-862	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAAGGTGCCTCAGGCCC	NA	False	NA	NA	False	AATACA	-25	NA	20724404	20744056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.36	chr14	+	4834	21	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	291	junction_8	31.0267626413069	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724404	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.37	chr14	+	4600	24	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	100.202347262803	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724404	20744920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20728825_20728994_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.38	chr14	+	7313	16	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	93.736415312063	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724404	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20738593_20738798_20738915_20739066_20739192_20739339_20740550_20740716_20740943_20741333_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.39	chr14	+	4598	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	291	junction_9	30.2922275116745	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724404	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.4	chr14	+	6939	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	6	-1	intron_retention	FALSE	canonical	3	291	junction_8	28.4581086085887	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724381	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.40	chr14	+	5329	18	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	291	junction_9	33.2068071564023	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724404	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.41	chr14	+	4334	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_20	77.3276943536375	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724404	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742498_20742787_20742980_20743211_20743302_20743718
ES.10262.42	chr14	+	4365	23	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	119.369045435843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724406	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.43	chr14	+	4833	21	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	-3	intron_retention	FALSE	canonical	3	56	junction_6	91.6649333169452	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATCCCTCTCATTACTC	NA	False	NA	10	True	AATAAA	-13	NA	20724406	20744915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.45	chr14	+	5176	24	NNC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_7	94.6928374237317	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724407	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20735895_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.46	chr14	+	4543	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	291	junction_9	30.1719185866894	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724407	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.47	chr14	+	4811	20	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	291	junction_9	31.6108610669833	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724407	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.48	chr14	+	4604	25	NNC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2	junction_3	121.031217277013	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724409	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20730984_20731097_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.49	chr14	+	4978	19	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	-2	intron_retention	FALSE	canonical	3	291	junction_9	32.1917959796446	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724410	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.5	chr14	+	4459	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	6	0	intron_retention	FALSE	canonical	3	22	junction_20	73.8804176741204	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724381	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
ES.10262.50	chr14	+	4622	25	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	119.911425644098	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724410	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.51	chr14	+	7728	18	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	291	junction_7	30.7662242342673	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724410	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.52	chr14	+	4343	24	NNC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_4	107.994696362109	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724411	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732844_20733226_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.53	chr14	+	4287	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	103.53728317985	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724412	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740886_20740943_20741333_20741431_20741505_20741652_20741788_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.54	chr14	+	4284	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	77.9435518751331	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724414	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.55	chr14	+	4765	21	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	4	-1	intron_retention	FALSE	canonical	3	291	junction_9	30.6650860099886	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724414	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.56	chr14	+	4893	20	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	291	junction_9	31.3336083758385	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATCCCTCTCATTACT	NA	False	NA	9	True	AATAAA	-12	NA	20724418	20744914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.57	chr14	+	2194	3	FSM	ENSMUSG00000039367.12	ENSMUST00000224061.2	605	3	29	-1618	-2	-1245	multi-exon	FALSE	canonical	3	348	junction_1	29.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGCAAAGACTATACCTA	NA	False	NA	NA	False	NA	NA	NA	20724419	20731552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20724457_20726025_20726226_20729595
ES.10262.58	chr14	+	4605	21	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	291	junction_9	30.9164600172788	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724419	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.59	chr14	+	3840	21	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	79.7796183244818	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724419	20744920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726060_20733257_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.6	chr14	+	4525	24	NNC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	-6	0	intron_retention	FALSE	canonical	3	22	junction_21	105.407966110113	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724384	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
ES.10262.60	chr14	+	4467	24	NNC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_17	122.442332400625	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724426	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741520_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
ES.10262.61	chr14	+	5495	17	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	10	-2	intron_retention	FALSE	canonical	3	291	junction_9	34.0860583670216	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724431	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.62	chr14	+	4587	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	12	-1	intron_retention	FALSE	canonical	1	2	junction_3	102.144050364147	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCTCTCATTACTCGC	NA	False	NA	12	True	AATAAA	-15	NA	20724433	20744917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20730984_20731097_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.63	chr14	+	4923	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	23	-2	intron_retention	FALSE	canonical	3	56	junction_6	89.3073370642902	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724444	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.64	chr14	+	4864	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-25	0	intron_retention	FALSE	canonical	1	1	junction_1	99.6595148673306	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724448	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724806_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.65	chr14	+	4736	23	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-25	1	intron_retention	FALSE	canonical	3	25	junction_1	73.2329578516564	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTCATTACTCGCGA	NA	False	NA	14	True	AATAAA	-17	NA	20724448	20744919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.66	chr14	+	4004	21	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-24	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	106.358544555668	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724449	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724806_20725798_20725850_20733425_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.67	chr14	+	4680	24	NIC	ENSMUSG00000039367.12	novel	724	8	NA	NA	74	-2	intron_retention	FALSE	canonical	3	25	junction_1	104.892419457916	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724570	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.68	chr14	+	4615	23	NNC	ENSMUSG00000039367.12	novel	724	8	NA	NA	76	-2	intron_retention	FALSE	canonical	3	22	junction_20	97.5388881971894	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724572	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
ES.10262.69	chr14	+	4884	23	NNC	ENSMUSG00000039367.12	novel	724	8	NA	NA	107	-2	intron_retention	FALSE	canonical	1	2	junction_3	118.469265812483	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724603	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724806_20726025_20726226_20729595_20729732_20730984_20731097_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.70	chr14	+	4538	23	NNC	ENSMUSG00000039367.12	novel	724	8	NA	NA	110	-2	intron_retention	FALSE	non_canonical	0	0	junction_17	120.115337134256	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724606	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741628_20741768_20741895_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.72	chr14	+	8143	16	NNC	ENSMUSG00000039367.12	novel	724	8	NA	NA	3964	-2	intron_retention	FALSE	canonical	0	0	junction_1	91.5009653865284	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20728460	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20728994_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.73	chr14	+	5967	6	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-1983	-2	intron_retention	FALSE	canonical	3	347	junction_1	14.7431339951857	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20737158	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20738915_20739066_20739192_20739339_20740089_20740771_20740943_20741333_20743302_20743718
ES.10262.74	chr14	+	5884	9	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-1831	-4	intron_retention	FALSE	canonical	0	0	junction_2	120.246036836979	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATCCCTCTCATTACT	NA	False	NA	9	True	AATAAA	-12	NA	20737310	20744914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20738593_20738798_20740550_20740716_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.75	chr14	+	4847	9	NIC	ENSMUSG00000039367.12	novel	4196	24	NA	NA	-1551	0	intron_retention	FALSE	canonical	3	326	junction_2	23.7667703948181	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20737590	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.76	chr14	+	3239	14	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-635	1	intron_retention	FALSE	canonical	0	0	junction_9	98.1389547420892	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTCATTACTCGCGA	NA	False	NA	14	True	AATAAA	-17	NA	20738506	20744919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741788_20741908_20742054_20742174_20742413_20742980_20743211_20743302_20743718
ES.10262.8	chr14	+	3384	17	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_2	88.6405795544569	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCCCTCTCATTACTCG	NA	False	NA	11	True	AATAAA	-14	NA	20724387	20744916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20724457_20726025_20726226_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10262.9	chr14	+	4440	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	78.0184471722781	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTCATTACTCGCG	NA	False	NA	13	True	AATAAA	-16	NA	20724388	20744918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20724451_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ES.10263.1	chr14	+	4163	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	-1	1	-1	-1	multi-exon	FALSE	canonical	3	28	junction_1	5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTTTCTTTATTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	20745034	20751083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20745767_20745855_20746482_20748278
ES.10263.10	chr14	+	7154	3	FSM	ENSMUSG00000039357.3_ENSMUSG00000063787.5	ENSMUST00000048016.3	4163	3	418	-3409	409	0	multi-exon	FALSE	canonical	3	28	junction_1	5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20745453	20754493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20745767_20745855_20746482_20748278
ES.10263.11	chr14	+	580	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	28	8	-24	-2	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTTGGCCATTTC	NA	False	NA	25	True	AATAAA	-8	NA	20753101	20754485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20753266_20753357_20753477_20754188
ES.10263.12	chr14	+	579	3	FSM	ENSMUSG00000063787.5	ENSMUST00000226072.2	578	3	-9	8	-9	-2	multi-exon	FALSE	canonical	3	132	junction_1	962	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTTGGCCATTTC	NA	False	NA	25	True	AATAAA	-8	NA	20753116	20754485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20753266_20753343_20753477_20754188
ES.10263.13	chr14	+	641	2	FSM	ENSMUSG00000063787.5	ENSMUST00000224633.2	557	2	-86	2	7	-2	multi-exon	FALSE	canonical	3	2056	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTTGGCCATTTC	NA	False	NA	25	True	AATAAA	-8	NA	20753132	20754485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20753477_20754188
ES.10263.14	chr14	+	540	1	NIC	ENSMUSG00000063787.5	novel	616	3	NA	NA	10	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	20753135	20753675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20753100_20753700
ES.10263.2	chr14	+	7473	3	Fusion	ENSMUSG00000039357.3_ENSMUSG00000063787.5	novel	4163	3	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	19	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTTGGCCATTTC	NA	False	NA	25	True	AATAAA	-8	NA	20745038	20754485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_20746482_20748278_20753530_20753706
ES.10263.3	chr14	+	4244	2	FSM	ENSMUSG00000039357.3	ENSMUST00000225804.2	3422	2	-1	-821	-1	0	multi-exon	FALSE	canonical	3	38	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCTTTATTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	20745043	20751084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20746482_20748278
ES.10263.4	chr14	+	3288	2	FSM	ENSMUSG00000039357.3	ENSMUST00000225804.2	3422	2	-1	135	-1	-135	multi-exon	FALSE	canonical	3	38	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTGCTTAACCTATTT	NA	False	NA	NA	False	AGTAAA	-22	NA	20745043	20750128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20746482_20748278
ES.10263.5	chr14	+	3196	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	12	955	3	-134	multi-exon	FALSE	canonical	3	28	junction_1	5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGCTTAACCTATTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	20745047	20750129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20745767_20745855_20746482_20748278
ES.10263.6	chr14	+	4810	3	Fusion	ENSMUSG00000039357.3_ENSMUSG00000119862.1	novel	4163	3	NA	NA	19	58	multi-exon	FALSE	canonical	0	0	junction_1	19	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTACCCATGTGTGCGT	NA	False	NA	NA	False	ATTAAA	-17	NA	20745063	20751755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_20745771_20745855_20746482_20748278
ES.10263.7	chr14	+	1219	2	FSM	ENSMUSG00000039357.3	ENSMUST00000225804.2	3422	2	374	1829	374	-1829	multi-exon	FALSE	canonical	3	38	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGAGCTGTTAACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20745418	20748434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20746482_20748278
ES.10263.9	chr14	+	3797	3	NNC	ENSMUSG00000039357.3	novel	4163	3	NA	NA	407	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACATGGTTTCTTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	20745451	20751079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20745767_20745855_20746482_20748223
ES.10264.1	chr14	-	1489	2	NIC	ENSMUSG00000097577.3	novel	1554	3	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGGCTCTGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	20753088	20737301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20738682_20752979
ES.10264.2	chr14	-	1535	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	19	0	19	0	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTAGGCTCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	20753061	20737303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20738682_20738832_20738908_20752979
ES.10264.3	chr14	-	560	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	4	990	4	-990	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTCCAGCTCGCTCT	NA	False	NA	NA	False	NA	NA	NA	20753076	20738293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20738682_20738832_20738908_20752979
ES.10264.4	chr14	-	3982	1	Antisense	novelGene_ENSMUSG00000039367.12_AS_novelGene_ENSMUSG00000039357.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTT	NA	False	NA	NA	False	NA	NA	NA	20747365	20743383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20743400_20747400
ES.10265.1	chr14	+	6076	26	FSM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	-3	0	-3	0	multi-exon	TRUE	canonical	3	22	junction_9	13.1390106172421	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGGTCTTTGCCTTC	NA	False	NA	17	True	TATAAA	-25	NA	20757616	20773687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.10	chr14	+	6031	26	FSM	ENSMUSG00000021819.12	ENSMUST00000224751.2	5951	26	-82	2	19	-1	multi-exon	FALSE	canonical	2	3	junction_11	15.0973375136148	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20757638	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766131_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.11	chr14	+	4161	18	NNC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	-641	-1	intron_retention	FALSE	canonical	0	0	junction_1	15.8559693713719	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20761525	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20761699_20764417_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.13	chr14	+	4143	14	NIC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	-552	-1	intron_retention	FALSE	canonical	3	24	junction_1	11.6049367173207	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20764790	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20770105_20771238_20771728_20771937_20772098_20772210_20773075_20773206
ES.10265.14	chr14	+	1834	7	NIC	ENSMUSG00000021819.12	novel	4288	15	NA	NA	1060	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	19.4486503387767	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20769898	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20770105_20771238_20771728_20771937_20772122_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.15	chr14	+	1540	6	FSM	ENSMUSG00000021819.12	ENSMUST00000225911.2	1098	6	-443	1	-3	0	multi-exon	FALSE	canonical	2	3	junction_4	22.2081066279861	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGGGTCTTTGCCTT	NA	False	NA	16	True	TATAAA	-24	NA	20771235	20773686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772963_20773075_20773206
ES.10265.16	chr14	+	1683	4	NNC	ENSMUSG00000021819.12	novel	1816	5	NA	NA	97	56166	intron_retention	FALSE	non_canonical	0	0	junction_3	26.4491125665032	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCAGGGGAGGGTATA	NA	False	NA	NA	False	NA	NA	NA	20771775	20829853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20772098_20772210_20773075_20773206_20773685_20829834
ES.10265.2	chr14	+	5586	24	NNC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	15.6301777810401	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20757627	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766617_20768613_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.3	chr14	+	6163	27	NNC	ENSMUSG00000021819.12	novel	5674	27	NA	NA	9	0	intron_retention	FALSE	canonical	3	10	junction_15	15.2548857243028	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGGGTCTTTGCCTT	NA	False	NA	16	True	TATAAA	-24	NA	20757628	20773686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768228_20768329_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.4	chr14	+	5879	28	NNC	ENSMUSG00000021819.12	novel	5674	27	NA	NA	12	0	intron_retention	FALSE	canonical	1	4	junction_1	16.3261511041808	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGGTCTTTGCCTTC	NA	False	NA	17	True	TATAAA	-25	NA	20757631	20773687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20757734_20758015_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768228_20768329_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.5	chr14	+	6996	22	NIC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	14	-1	intron_retention	FALSE	canonical	3	22	junction_7	12.7968604426323	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20757633	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20758125_20760704_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.6	chr14	+	7138	25	NIC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	17	-1	intron_retention	FALSE	canonical	3	22	junction_9	12.9292277633104	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20757636	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.7	chr14	+	6105	25	NNC	ENSMUSG00000021819.12	novel	6073	26	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_10	15.2779797966441	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCTGGGTCTTTGCCT	NA	False	NA	15	True	TATAAA	-23	NA	20757636	20773685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764847_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10265.9	chr14	+	5953	27	FSM	ENSMUSG00000021819.12	ENSMUST00000223840.2	5674	27	-279	0	18	0	multi-exon	FALSE	canonical	1	2	junction_10	14.9155909058611	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGGTCTTTGCCTTC	NA	False	NA	17	True	TATAAA	-25	NA	20757637	20773687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764637_20764738_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ES.10266.1	chr14	-	3626	20	NNC	ENSMUSG00000021820.19	novel	3604	20	NA	NA	-6	18146	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.17602560934632	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCCTATCCCCCAAGT	NA	False	NA	NA	False	TTTAAA	-25	NA	20844162	20766796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20766821_20784947_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.10	chr14	-	3883	13	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	237	0	intron_retention	FALSE	canonical	3	47	junction_8	9.23309265630969	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9660	False	NA	-1	True	AATAAA	-15	NA	20784393	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.11	chr14	-	3873	14	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	223	0	intron_retention	FALSE	canonical	3	50	junction_12	7.97926306454765	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9646	False	NA	-1	True	AATAAA	-15	NA	20784407	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.12	chr14	-	3960	12	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	1	1	junction_2	20.1605129148972	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774889_20774975_20775048_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.13	chr14	-	4589	10	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	224	0	intron_retention	FALSE	canonical	3	50	junction_8	8.78269904238645	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9647	False	NA	-1	True	AATAAA	-15	NA	20784406	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774889_20774975_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.14	chr14	-	3030	11	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	-362	0	intron_retention	FALSE	canonical	3	60	junction_1	6.67008245826092	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	NA	False	NA	-1	True	AATAAA	-15	NA	20779652	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20779032_20779233
ES.10266.15	chr14	-	3808	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	21.958332526559	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9410	False	NA	-1	True	AATAAA	-15	NA	20784643	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778255_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.16	chr14	-	3846	13	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	233	0	intron_retention	FALSE	canonical	1	3	junction_8	19.4629277231242	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9656	False	NA	-1	True	AATAAA	-15	NA	20784397	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778255_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.17	chr14	-	4075	12	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	2	2	junction_7	19.9109588164843	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774429_20774528_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777684_20778143_20778359_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.18	chr14	-	3956	14	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	3	47	junction_10	9.4530919145834	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.19	chr14	-	3675	14	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	233	0	intron_retention	FALSE	canonical	1	1	junction_3	19.4957133810663	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9656	False	NA	-1	True	AATAAA	-15	NA	20784397	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774632_20774778_20774889_20774975_20775048_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.2	chr14	-	3847	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	227	-167	227	167	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGCCCTCTCCCAGACAA	9650	False	NA	NA	False	AATAAA	-15	NA	20784403	20773630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.20	chr14	-	3962	13	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	223	0	intron_retention	FALSE	canonical	2	13	junction_2	16.344384016808	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9646	False	NA	-1	True	AATAAA	-15	NA	20784407	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777684_20778143_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.21	chr14	-	3725	15	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	209	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	18.3854700838483	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTCTGCTTCATT	9632	False	NA	-3	True	AATAAA	-13	NA	20784421	20773799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778359_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.22	chr14	-	4390	11	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	-2	intron_retention	FALSE	canonical	3	50	junction_9	8.44334057112468	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTGTCTGCTTCATT	9644	False	NA	-3	True	AATAAA	-13	NA	20784409	20773799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.23	chr14	-	3604	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	-40	0	-3	0	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844159	20784942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.24	chr14	-	3729	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	-117	-8	-59	0	multi-exon	FALSE	canonical	2	6	junction_6	9.18507762457831	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844215	20784942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.25	chr14	-	3708	20	NIC	ENSMUSG00000021820.19	novel	3703	21	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.0912962904471	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844141	20784942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788908_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.26	chr14	-	3723	21	NIC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	11.7867510366513	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844097	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.27	chr14	-	3518	18	NIC	ENSMUSG00000021820.19	novel	3604	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	11.4942440838371	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844122	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788908_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20829271_20829332_20842586_20842682_20843968
ES.10266.28	chr14	-	6363	20	NNC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	11.9056773160778	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844097	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20819003_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.29	chr14	-	3716	20	NIC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844159	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.3	chr14	-	3927	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	-16	-4	-16	4	multi-exon	FALSE	canonical	3	47	junction_10	9.23281636117516	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGCTTCATTGCAGTA	9407	False	NA	3	True	AATAAA	-19	NA	20784646	20773793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.30	chr14	-	3107	19	NNC	ENSMUSG00000021820.19	novel	3604	20	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5277443105271	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844145	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20786616_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.31	chr14	-	6838	18	NIC	ENSMUSG00000021820.19	novel	3564	19	NA	NA	0	-2	intron_retention	FALSE	canonical	3	16	junction_5	6.41742869095249	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844093	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.32	chr14	-	3650	20	NIC	ENSMUSG00000021820.19	novel	3604	20	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	11.2212698705149	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTGTTATTGCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	20844130	20784944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788908_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.33	chr14	-	4197	6	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	47670	-5	-6963	-3	intron_retention	FALSE	canonical	3	28	junction_1	2.24499443206436	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGTGTTATTGCTGT	NA	False	NA	-3	True	AATAAA	-15	NA	20796428	20784945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671
ES.10266.35	chr14	-	1922	20	NIC	ENSMUSG00000021820.19	novel	1937	22	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATTGTTTAAAAAAACG	NA	False	NA	NA	False	NA	NA	NA	20844118	20786697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.36	chr14	-	4052	13	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	0	17779	0	1875	5prime_fragment	FALSE	canonical	3	21	junction_10	6.06160503130611	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTAGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	20844098	20802729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ES.10266.4	chr14	-	3810	15	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	18.7868006204095	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGCTTCATTGCA	9422	False	NA	0	True	AATAAA	-16	NA	20784631	20773796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775048_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.5	chr14	-	3844	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	18.1518537873785	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9411	False	NA	-1	True	AATAAA	-15	NA	20784642	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778255_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.6	chr14	-	4032	13	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	211	0	intron_retention	FALSE	canonical	3	50	junction_11	8.25084170790404	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9634	False	NA	-1	True	AATAAA	-15	NA	20784419	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.7	chr14	-	3963	13	NNC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	220	0	intron_retention	FALSE	canonical	2	2	junction_8	19.7151591421424	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9643	False	NA	-1	True	AATAAA	-15	NA	20784410	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778359_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.8	chr14	-	3870	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	16.2331545339299	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9423	False	NA	-1	True	AATAAA	-15	NA	20784630	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10266.9	chr14	-	3786	14	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	3	47	junction_9	9.4530919145834	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ES.10267.1	chr14	-	227	1	Intergenic	novelGene_8613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGCGTTTCTTTGCATA	NA	False	NA	NA	False	NA	NA	NA	20941540	20941313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_20941300_20941500
ES.10268.1	chr14	+	179	1	Intergenic	novelGene_8614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAAGACAAAGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	20948287	20948466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_20948300_20948500
ES.10269.1	chr14	+	5502	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-227	-8	-227	8	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGTTATTTTACTAACA	NA	False	NA	NA	False	AATAAA	-27	NA	20979238	21083752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.11	chr14	+	5708	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	4	-445	4	445	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTTTGCCTAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	20979469	21084189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.12	chr14	+	4196	20	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	28	2743	28	-2743	5prime_fragment	FALSE	canonical	3	265	junction_11	15.6812077662503	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATACTTGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	20979493	21081001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849
ES.10269.13	chr14	+	1783	10	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	28	30070	28	4825	5prime_fragment	FALSE	canonical	3	268	junction_5	9.75249255888519	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCATGTTTAAGCTCT	NA	False	NA	NA	False	AATATA	-19	NA	20979493	21053674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162
ES.10269.18	chr14	+	4776	19	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.8739072394585	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATGCTCTAATTGAG	NA	False	NA	NA	False	AATAAA	-12	NA	20979505	21083737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069441_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.2	chr14	+	3767	21	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	-23	-1402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	65.5937497022392	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTGTGAGGAAATCATTA	NA	False	NA	NA	False	NA	NA	NA	20979442	21082342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060186_21065050_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.21	chr14	+	5147	21	NNC	ENSMUSG00000021823.11	novel	446	3	NA	NA	37873	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.5389006621259	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATGCTCTAATTGAG	NA	False	NA	NA	False	AATAAA	-12	NA	21017338	21083737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21017517_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.22	chr14	+	4971	20	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	38139	6	38139	-6	3prime_fragment	FALSE	canonical	3	265	junction_10	16.0212808615046	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGCTCTAATTGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	21017604	21083738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.23	chr14	+	4751	18	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	53968	5	-38637	-5	3prime_fragment	FALSE	canonical	3	265	junction_8	16.8904469222053	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTCTAATTGAGGT	919	False	NA	NA	False	AATAAA	-14	NA	21033433	21083739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.24	chr14	+	4425	16	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	-36379	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	74.5575393013119	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTCTAATTGAGGTTA	3177	False	NA	NA	False	AATAAA	-16	NA	21035691	21083741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059057_21064997_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.25	chr14	+	3965	12	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	73695	5	-18910	-5	3prime_fragment	FALSE	canonical	3	265	junction_2	17.9866801038164	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTCTAATTGAGGT	547	False	NA	NA	False	AATAAA	-14	NA	21053160	21083739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.26	chr14	+	3345	9	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	-14891	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	99.5181359099938	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCTCTAATTGAGGT	4566	False	NA	NA	False	AATAAA	-14	NA	21057179	21083739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069441_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.27	chr14	+	3267	8	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	85511	7	-7094	-7	3prime_fragment	FALSE	canonical	3	285	junction_2	13.8018040820165	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATGCTCTAATTGAG	NA	False	NA	NA	False	AATAAA	-12	NA	21064976	21083737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.28	chr14	+	4664	3	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	97510	3	4905	-3	3prime_fragment	FALSE	canonical	3	294	junction_1	8	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTCTAATTGAGGTTA	780	False	NA	NA	False	AATAAA	-16	NA	21076975	21083741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21079448_21079849_21079955_21081654
ES.10269.29	chr14	+	4190	2	NIC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	5781	-3	intron_retention	FALSE	canonical	3	310	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTCTAATTGAGGTTA	828	False	NA	NA	False	AATAAA	-16	NA	21077851	21083741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21079955_21081654
ES.10269.3	chr14	+	5480	22	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	87.0078840225768	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATGCTCTAATTGAG	NA	False	NA	NA	False	AATAAA	-12	NA	20979449	21083737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21077150_21077355_21079243_21079448_21079849_21079955_21081654
ES.10269.30	chr14	+	5997	1	Genic_Genomic	ENSMUSG00000021823.11	novel	NA	NA	NA	NA	10446	4769	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5493	False	NA	NA	False	CATAAA	-24	NA	21082516	21088513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_21082500_21088500
ES.10269.4	chr14	+	3653	16	NNC	ENSMUSG00000021823.11	novel	5267	21	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.9135256466331	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGCTCTAATTGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	20979452	21083738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069385_21082280
ES.10269.5	chr14	+	3531	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-13	1749	-13	-1749	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGCACTCTCTCCCATG	NA	False	NA	NA	False	TATAAA	-19	NA	20979452	21081995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.7	chr14	+	4631	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-11	647	-11	-647	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGAGTATGGTATCT	NA	False	NA	NA	False	CATAAA	-15	NA	20979454	21083097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.10269.8	chr14	+	3876	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	-6	1397	-6	-1397	multi-exon	FALSE	canonical	3	265	junction_11	15.7968351260624	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAAATCATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	20979459	21082347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ES.1027.1	chr1	+	1456	4	Antisense	novelGene_ENSMUSG00000026313.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91912213	91920348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_91912295_91912381_91912502_91915268_91915382_91919206
ES.1027.2	chr1	+	5318	3	Antisense	novelGene_ENSMUSG00000026313.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGCCAACATGCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	91912213	91920385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_91912295_91912381_91912502_91915268
ES.1027.3	chr1	+	5088	2	Antisense	novelGene_ENSMUSG00000026313.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGCCAACATGCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	91912213	91920385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_91917233_91920316
ES.1027.4	chr1	+	2234	4	Antisense	novelGene_ENSMUSG00000026313.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGCCAACATGCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	91912213	91920385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_91912295_91912381_91912502_91915268_91917233_91920316
ES.10270.1	chr14	+	1630	10	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	120.221811459557	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGATTTTTTTTCTGTC	NA	False	NA	9	True	AATAAA	-12	NA	21102615	21498630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.10	chr14	+	1623	9	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	116.534262665535	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTCTGTCTTGCTT	NA	False	NA	15	True	AATAAA	-18	NA	21102670	21498636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21102769_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.11	chr14	+	888	8	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-6	-954	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	132.803675877329	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTATAATCTATTTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	21102672	21368776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
ES.10270.12	chr14	+	1188	8	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-2	-650	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	132.803675877329	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATGCAAATTA	NA	False	NA	NA	False	NA	NA	NA	21102676	21369080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
ES.10270.14	chr14	+	747	6	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-2	-946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.266282384614	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTATTTTACTGAGGTAA	NA	False	NA	NA	False	AATAAA	-24	NA	21102692	21368784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21102769_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21368645
ES.10270.15	chr14	+	1738	11	NNC	ENSMUSG00000039197.11	novel	261	2	NA	NA	-1269	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.10944555305	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTCTGTCTTGCT	NA	False	NA	14	True	AATAAA	-17	NA	21124950	21498635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21125036_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.16	chr14	+	1452	11	NNC	ENSMUSG00000039197.11	novel	1818	11	NA	NA	-11	-23001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	139.055708261114	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21126208	21475629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21475257
ES.10270.17	chr14	+	1819	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	1	-2	1	2	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGATTTTTTTTCTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	21126220	21498632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.18	chr14	+	2181	8	NIC	ENSMUSG00000039197.11	novel	1818	11	NA	NA	50	1198	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	159.195938826264	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATACTAAAATACCAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	21126269	21378059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
ES.10270.19	chr14	+	3496	1	Intergenic	novelGene_8618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2889	False	NA	NA	False	ATTAAA	-8	NA	21316361	21319857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21316400_21319900
ES.10270.2	chr14	+	1637	9	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	127.467397792534	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTCTGTCTTGCTT	NA	False	NA	15	True	AATAAA	-18	NA	21102634	21498636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21473570_21473658_21497881
ES.10270.20	chr14	+	343	1	Intergenic	novelGene_8625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	21449910	21450253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21449900_21450300
ES.10270.21	chr14	+	161	1	Intergenic	novelGene_8627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	944	False	NA	NA	False	NA	NA	NA	21461887	21462048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21461900_21462000
ES.10270.3	chr14	+	332	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	-39	-4	-2	4	multi-exon	FALSE	canonical	3	60	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGATCCATTTTAACAG	NA	False	NA	8	True	AATAAA	-19	NA	21102639	21103992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21102769_21103789
ES.10270.4	chr14	+	1783	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTGTCTTGCTTG	NA	False	NA	16	True	AATAAA	-19	NA	21102640	21498637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.5	chr14	+	1554	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	0	228	0	-221	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTGTGTGTGCACATGT	NA	False	NA	NA	False	TATAAA	-15	NA	21102641	21498409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.6	chr14	+	504	5	NNC	ENSMUSG00000039197.11	novel	2224	7	NA	NA	-17	62918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	173.833792744679	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAATCTATATATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	21102661	21220883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21220694
ES.10270.7	chr14	+	1932	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	21	-171	-16	171	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTGTTTTCATT	NA	False	NA	NA	False	NA	NA	NA	21102662	21498808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.8	chr14	+	1673	10	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	113.660312627877	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGATTTTTTTTCTGTCT	NA	False	NA	10	True	AATAAA	-13	NA	21102669	21498631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21102769_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ES.10270.9	chr14	+	3270	8	NNC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	-9	-9663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.263849698641	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	21102669	21410739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21408229
ES.10271.1	chr14	-	1786	2	Antisense	novelGene_ENSMUSG00000021823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTGGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20994314	20992468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_20992933_20992992
ES.10272.1	chr14	-	3254	1	Intergenic	novelGene_8615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGAAGAAAGCGAT	3162	False	NA	NA	False	NA	NA	NA	21008185	21004931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21004900_21008200
ES.10273.1	chr14	-	6439	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-20	-11	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCTTGTATATCAATGA	NA	False	NA	NA	False	CATAAA	-18	NA	21102551	21081520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.10	chr14	-	3273	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	248	3211	-7	1361	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATCTTCTGGTAACAGA	NA	False	NA	NA	False	AATAGA	-15	NA	21102270	21084720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.11	chr14	-	3055	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-6	1316	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	107.347043532191	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGAAGAGGCCTCT	NA	False	NA	NA	False	CATAAA	-18	NA	21102269	21084765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095832_21102207
ES.10273.12	chr14	-	3430	10	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	5	1315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	127.576362995116	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAAGAGGCCTC	NA	False	NA	NA	False	CATAAA	-17	NA	21102285	21084766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21097543_21097732_21102207
ES.10273.13	chr14	-	3402	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	-20	3350	-7	1222	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGATGGAATATTCT	NA	False	NA	7	True	AATAAA	-32	NA	21102538	21084859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.14	chr14	-	2687	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	4	1207	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102286	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
ES.10273.15	chr14	-	3470	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-360	1207	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102936	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.16	chr14	-	3245	10	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	3	1207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.987993988739	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102260	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21089485_21089622_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.17	chr14	-	3883	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	17	1207	intron_retention	FALSE	canonical	3	26	junction_7	101.618132722262	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102559	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.18	chr14	-	3198	10	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-2	1207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	127.576362995116	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102257	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21095916_21096009_21102207
ES.10273.19	chr14	-	3780	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-5	1207	intron_retention	FALSE	canonical	3	207	junction_7	45.0165502445308	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102268	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21095832_21102207
ES.10273.2	chr14	-	6482	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	237	13	9	-13	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGCTTGTATATCAAT	NA	False	NA	NA	False	CATAAA	-16	NA	21102281	21081522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.20	chr14	-	2920	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	18	1207	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	133.925199957564	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102558	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095832_21102522
ES.10273.21	chr14	-	3313	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-32	1207	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	101.806188417011	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTAAAGTTTGATTG	NA	False	NA	-8	True	AATAAA	-17	NA	21102220	21084874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21101963
ES.10273.23	chr14	-	3043	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	6	1204	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	101.806188417011	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102249	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095780_21102207
ES.10273.24	chr14	-	3136	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-4	1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.5740930162058	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102267	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087349_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.25	chr14	-	2849	8	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-11	1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	139.700116138032	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102542	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095780_21102522
ES.10273.26	chr14	-	3579	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-1	1204	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	104.450272259099	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102532	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21088994_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.27	chr14	-	2930	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-1	1204	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	107.347043532191	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102256	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095832_21102207
ES.10273.29	chr14	-	3323	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-15	1204	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	128.939908484534	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102591	21084877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21088994_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.3	chr14	-	4918	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-7	-1519	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATAGTTCCTACTGATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21102538	21083028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.33	chr14	-	2433	6	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	8	1200	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	145.275462484206	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATGATTTTTAAAGT	NA	False	NA	-15	True	AATAAA	-10	NA	21102247	21084881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21089195_21089330_21090119_21090206_21091020_21091159_21102207
ES.10273.35	chr14	-	2295	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	17	409	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCCCTTCATTTGG	NA	False	NA	NA	False	TTTAAA	-13	NA	21102559	21085672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.36	chr14	-	2320	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	241	4171	13	401	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGCTTGTGTGCCCT	NA	False	NA	NA	False	TTTAAA	-5	NA	21102277	21085680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.37	chr14	-	2404	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	20	4308	20	264	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCATTCTCATGTTT	NA	False	NA	4	True	ATTAAA	-27	NA	21102498	21085817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.38	chr14	-	1731	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	13	260	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTGCCATTCTCAT	NA	False	NA	0	True	ATTAAA	-23	NA	21102277	21085821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
ES.10273.39	chr14	-	2131	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-12	260	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	123.451850431656	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTGCCATTCTCAT	NA	False	NA	0	True	ATTAAA	-23	NA	21102543	21085821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087319_21088037_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.4	chr14	-	4171	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-15	-2274	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTAAAGTTGTTAGTAA	NA	False	NA	27	True	AATACA	-10	NA	21102546	21083783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.40	chr14	-	2146	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	17	260	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTGCCATTCTCAT	NA	False	NA	0	True	ATTAAA	-23	NA	21102559	21085821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
ES.10273.41	chr14	-	2132	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	22	258	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	99.5740930162058	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACCTTTGCCATTCTC	NA	False	NA	-2	True	ATTAAA	-21	NA	21102233	21085823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087319_21088039_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.42	chr14	-	2020	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-6	243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	111.565300728007	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAATCAAGCAAA	NA	False	NA	-17	True	ATTAAA	-6	NA	21102269	21085838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.43	chr14	-	2058	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-360	243	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	118.11670311838	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAATCAAGCAAA	NA	False	NA	-17	True	ATTAAA	-6	NA	21102936	21085838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102522
ES.10273.44	chr14	-	601	1	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	15870	4538	15497	34	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCAGATTTTGATTTA	NA	False	NA	NA	False	TATAAA	-15	NA	21086648	21086047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_21086000_21086600
ES.10273.45	chr14	-	1530	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	228	4974	0	153	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTATTTTGTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	21102290	21086483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.46	chr14	-	6657	2	NNC	ENSMUSG00000021824.14	novel	673	3	NA	NA	798	-580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATGGTATAC	NA	False	NA	NA	False	NA	NA	NA	21101347	21091661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21095502_21098530
ES.10273.5	chr14	-	4422	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	8	2302	8	2270	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATTAGCTTCAATACAA	NA	False	NA	-1	True	AATAAA	-21	NA	21102510	21083811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10273.7	chr14	-	3960	8	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	-11	2263	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	133.925199957564	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTGAGAATTAGCTTC	NA	False	NA	-8	True	AATAAA	-14	NA	21102542	21083818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095832_21102522
ES.10273.8	chr14	-	4106	9	NNC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	6	2261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	103.394194106826	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACCTTGAGAATTAGCT	NA	False	NA	-10	True	AATAAA	-12	NA	21102570	21083820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095780_21102522
ES.10273.9	chr14	-	3484	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	232	3016	4	1556	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGAGGTAGCCCCACCC	NA	False	NA	NA	False	AATAAA	-17	NA	21102286	21084525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ES.10274.1	chr14	-	3610	1	Antisense	novelGene_ENSMUSG00000039197.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	21157610	21154000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21154000_21157600
ES.10275.1	chr14	-	2347	1	Intergenic	novelGene_8616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAACTGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	21212245	21209898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21209900_21212200
ES.10276.1	chr14	-	166	1	Intergenic	novelGene_8617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	21247098	21246932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21246900_21247100
ES.10277.1	chr14	-	3533	1	Intergenic	novelGene_8619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTTCAACCAAATCCAT	NA	False	NA	NA	False	AAAACA	-28	NA	21355745	21352212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21352200_21355700
ES.10278.1	chr14	-	4719	1	Intergenic	novelGene_8620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21366595	21361876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21361900_21366600
ES.10278.2	chr14	-	3089	1	Intergenic	novelGene_8621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGATTGGGGTAGAAGA	NA	False	NA	NA	False	NA	NA	NA	21366595	21363506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21363500_21366600
ES.10279.1	chr14	-	4472	1	Intergenic	novelGene_8622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCTACTGCATTAAAACA	NA	False	NA	NA	False	NA	NA	NA	21391328	21386856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21386900_21391300
ES.1028.1	chr1	+	4687	1	Antisense	novelGene_ENSMUSG00000026313.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCACCCCTTAACGAGTC	NA	False	NA	NA	False	NA	NA	NA	92037680	92042367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_92037700_92042400
ES.10280.1	chr14	-	230	1	Intergenic	novelGene_8623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAGTACTTTTAATAAAGA	NA	False	NA	NA	False	AATAAA	-25	NA	21394495	21394265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21394300_21394500
ES.10281.1	chr14	-	176	1	Intergenic	novelGene_8624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGAACAATATAGCTTC	NA	False	NA	NA	False	NA	NA	NA	21449464	21449288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21449300_21449500
ES.10282.1	chr14	-	155	1	Intergenic	novelGene_8626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	21456570	21456415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21456400_21456600
ES.10283.1	chr14	-	174	1	Intergenic	novelGene_8628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	21485746	21485572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21485600_21485700
ES.10284.1	chr14	-	5269	1	Genic_Genomic	ENSMUSG00000114875.2	novel	NA	NA	NA	NA	17537	1333	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTCTTTCTTCCTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	21503952	21498683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_21498700_21504000
ES.10284.2	chr14	-	3058	5	NNC	ENSMUSG00000114875.2	novel	1040	3	NA	NA	-4935	-1634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.91547594742265	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCCTTCTCATGCCTCC	NA	False	NA	NA	False	AATAAA	-21	NA	21528363	21501650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21504060_21508311_21508373_21515874_21515969_21526738_21527123_21528253
ES.10284.3	chr14	-	2895	3	NNC	ENSMUSG00000114875.2	novel	1040	3	NA	NA	-169	-1634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCCTTCTCATGCCTCC	NA	False	NA	NA	False	AATAAA	-21	NA	21521658	21501650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21504060_21515878_21515969_21521262
ES.10284.4	chr14	-	2628	5	NNC	ENSMUSG00000114875.2	novel	1040	3	NA	NA	-4941	-2070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.91547594742265	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGCCATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	21528369	21502086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21504060_21508311_21508373_21515874_21515969_21526738_21527123_21528253
ES.10284.5	chr14	-	9823	1	FSM	ENSMUSG00000114875.2	ENSMUST00000225719.2	4503	1	1900	-7220	-39	7220	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTGTTTTATTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	21521528	21511705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21511700_21521500
ES.10284.6	chr14	-	3015	1	Intergenic	novelGene_8629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAAGAACCTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	21526997	21523982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21524000_21527000
ES.10284.7	chr14	-	1580	2	Intergenic	novelGene_8630	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATTTACACTCCAAA	NA	False	NA	NA	False	AATAAA	-23	NA	21528363	21525652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21527123_21528253
ES.10284.8	chr14	-	681	1	Intergenic	novelGene_8631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGTAAAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	21528363	21527682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21527700_21528400
ES.10285.1	chr14	+	7040	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-116	3	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTCCTGTCATGTTA	NA	False	NA	13	True	AATAAA	-23	NA	21531385	21722204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.10	chr14	+	7039	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69.2251729320631	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGCCTCTCGTGTCCTGT	NA	False	NA	6	True	AATAAA	-16	NA	21531503	21722197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21542100_21542221_21566693_21567567_21659821_21659931_21668958_21669079_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.12	chr14	+	7385	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	61.0775217884622	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATCTTCATTTTGCC	NA	False	NA	14	True	AATAAA	-24	NA	21531503	21722547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21542100_21542221_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.13	chr14	+	7175	19	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.42072590646	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCCTCTCGTGTCC	NA	False	NA	3	True	AATAAA	-13	NA	21531503	21722194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21608804_21608897_21659821_21659931_21661135_21661307_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.14	chr14	+	7590	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	47.1299732123836	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21531503	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.15	chr14	+	2594	6	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	1273	combination_of_known_junctions	FALSE	canonical	3	106	junction_5	10.1113797278116	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTGAAGTAGAAATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	21531503	21673318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022
ES.10285.16	chr14	+	7014	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.4790593656444	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21531503	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21537353_21537450_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.18	chr14	+	2885	13	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	12866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	52.0055419055401	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAATATTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	21531503	21697523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21696761
ES.10285.19	chr14	+	6950	17	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.656065276989	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531503	21722201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669079_21669285_21669368_21672022_21672156_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21707945_21708029_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.2	chr14	+	7289	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-21	2	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATCTTCATTTTGCCC	NA	False	NA	15	True	AATAAA	-25	NA	21531480	21722548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.20	chr14	+	7007	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.9394726317249	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGCCTCTCGTGTCCTGT	NA	False	NA	6	True	AATAAA	-16	NA	21531503	21722197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21608804_21608897_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.21	chr14	+	7710	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.2170071924312	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21531503	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21542100_21542221_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.22	chr14	+	6996	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	60.0333817173015	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTAGCCTCTCGTGTCCT	NA	False	NA	4	True	AATAAA	-14	NA	21531503	21722195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21707945_21708029_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.24	chr14	+	6943	17	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.227281549971	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21531503	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681363_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.25	chr14	+	6732	15	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	52.6413064318995	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTCCTGTCATGTT	NA	False	NA	12	True	AATAAA	-22	NA	21531503	21722203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.26	chr14	+	7449	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.4790593656444	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTTGATCTTCATTTT	NA	False	NA	11	True	AATAAA	-21	NA	21531503	21722544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21562332_21562520_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.27	chr14	+	11494	15	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	106	junction_5	35.2923649024568	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531503	21722201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.28	chr14	+	7036	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.9394726317249	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTAGCCTCTCGTGTCCT	NA	False	NA	4	True	AATAAA	-14	NA	21531503	21722195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21637741_21637865_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.29	chr14	+	5398	2	FSM	ENSMUSG00000021767.20	ENSMUST00000182996.2	606	2	2	-4794	2	1601	multi-exon	FALSE	canonical	3	107	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACACAGTCCCATCCTA	NA	False	NA	NA	False	NA	NA	NA	21531503	21571973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21531622_21566693
ES.10285.3	chr14	+	7353	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.9394726317249	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGACTTTGATCTTC	NA	False	NA	6	True	AATAAA	-16	NA	21531499	21722539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21588003_21588096_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.30	chr14	+	6940	17	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	52.2912143074723	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21531503	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669263_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.31	chr14	+	6041	16	NIC	ENSMUSG00000021767.20	novel	535	6	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	53.5377748261294	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21531506	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.33	chr14	+	7659	18	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	65.0639823505137	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTTGATCTTCAT	NA	False	NA	8	True	AATAAA	-18	NA	21531513	21722541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21707945_21708029_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.35	chr14	+	6834	16	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-7715	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.921352643921	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTAGCCTCTCGTGTCCT	5404	False	NA	4	True	AATAAA	-14	NA	21542122	21722195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21542221_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718401
ES.10285.36	chr14	+	7018	17	FSM	ENSMUSG00000021767.20	ENSMUST00000182405.9	6977	17	-42	1	-27	-1	multi-exon	FALSE	canonical	3	3	junction_1	51.5338177801723	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21549810	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21550029_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.37	chr14	+	7317	17	FSM	ENSMUSG00000021767.20	ENSMUST00000069648.14	7649	17	-19	351	-4	-6	multi-exon	FALSE	canonical	3	3	junction_1	58.5543284053365	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTAGCCTCTCGTGTCCT	NA	False	NA	4	True	AATAAA	-14	NA	21549833	21722195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21550029_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.38	chr14	+	7184	17	FSM	ENSMUSG00000021767.20	ENSMUST00000182855.8	6791	17	8	-401	-7	-6	multi-exon	FALSE	canonical	1	1	junction_1	51.8893052564784	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGACTTTGATCTTCA	NA	False	NA	7	True	AATAAA	-17	NA	21549845	21722540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21549890_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.39	chr14	+	7019	17	NIC	ENSMUSG00000021767.20	novel	7699	17	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	51.8893052564784	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21550927	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.4	chr14	+	7040	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-2	117	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGAGATTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	21531499	21722318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.40	chr14	+	7861	17	NIC	ENSMUSG00000021767.20	novel	7699	17	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	59.1131066261959	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21550958	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675830_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.41	chr14	+	7305	17	NIC	ENSMUSG00000021767.20	novel	7699	17	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	68.1824012759158	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGCCTCTCGTGTCCTG	NA	False	NA	5	True	AATAAA	-15	NA	21550968	21722196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669079_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.42	chr14	+	6746	16	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-51	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.9612676263131	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	5810	False	NA	9	True	AATAAA	-19	NA	21566767	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674977_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.43	chr14	+	6779	16	ISM	ENSMUSG00000021767.20	ENSMUST00000182964.3	7699	17	16239	228	217	117	3prime_fragment	FALSE	canonical	3	25	junction_6	47.2320042155975	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGAGATTTTTTTTTTC	6202	False	NA	NA	False	AATAAA	-20	NA	21567159	21722318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.44	chr14	+	8105	2	ISM	ENSMUSG00000021767.20	ENSMUST00000183055.2	2680	5	16519	2838	533	-2838	internal_fragment	FALSE	canonical	3	130	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAGGGTTGTGTGGAG	6518	False	NA	NA	False	NA	NA	NA	21567475	21667835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21567567_21659821
ES.10285.45	chr14	+	6613	17	NNC	ENSMUSG00000021767.20	novel	7649	17	NA	NA	544	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.1165992526785	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	6529	False	NA	8	True	AATAAA	-18	NA	21567486	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21567567_21608616_21608897_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.46	chr14	+	7166	16	FSM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	599	-1600	599	-5	multi-exon	FALSE	canonical	3	23	junction_6	47.5975723003694	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTTGATCTTCAT	6584	False	NA	8	True	AATAAA	-18	NA	21567541	21722541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675830_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.47	chr14	+	4177	2	NNC	ENSMUSG00000021767.20	novel	3873	2	NA	NA	624	1602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACACAGTCCCATCCTAT	6609	False	NA	NA	False	NA	NA	NA	21567566	21571974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21571616_21571846
ES.10285.48	chr14	+	3676	1	Intergenic	novelGene_8632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21576568	21580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21576600_21580200
ES.10285.49	chr14	+	2104	2	Intergenic	novelGene_8633	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21585129	21589576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21585661_21588003
ES.10285.5	chr14	+	7134	17	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-2	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.1630556524443	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTATTTAATAAATTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	21531499	21722418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687620_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.50	chr14	+	4118	1	Intergenic	novelGene_8634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAGGAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	21585494	21589612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21585500_21589600
ES.10285.51	chr14	+	1863	5	NNC	ENSMUSG00000021767.20	novel	4671	4	NA	NA	37076	1251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.1150662720885	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTTTTTATTTTAG	NA	False	NA	NA	False	TATAAA	-10	NA	21604018	21673296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21604301_21659821_21659931_21668958_21669075_21669285_21669368_21672022
ES.10285.52	chr14	+	2428	2	Intergenic	novelGene_8635	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAAAAAAGAAAGAGCC	NA	False	NA	NA	False	NA	NA	NA	21614333	21616811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21615320_21615369
ES.10285.53	chr14	+	1175	1	Intergenic	novelGene_8636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21615789	21616964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21615800_21617000
ES.10285.54	chr14	+	1799	1	Intergenic	novelGene_8638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTGGAGAAAGGCCTC	NA	False	NA	NA	False	NA	NA	NA	21651748	21653547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21651700_21653500
ES.10285.55	chr14	+	6265	16	NNC	ENSMUSG00000021767.20	novel	6977	17	NA	NA	-12748	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.2895771841792	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	2311	False	NA	12	True	AATAAA	-22	NA	21659861	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21673368_21673402_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.56	chr14	+	6677	12	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	-3652	-6	intron_retention	FALSE	canonical	0	0	junction_3	72.4071363087213	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGACTTTGATCTTCA	NA	False	NA	7	True	AATAAA	-17	NA	21668957	21722540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21669079_21669285_21669368_21672022_21672156_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21712535_21714524_21714817_21718398
ES.10285.57	chr14	+	5813	14	NIC	ENSMUSG00000021767.20	novel	6977	17	NA	NA	-3652	-11	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	56.0076072601385	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTTCTAGCCTCTCGT	NA	False	NA	-1	True	AATAAA	-9	NA	21668957	21722190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21669079_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.58	chr14	+	6134	8	NNC	ENSMUSG00000021767.20	novel	6791	17	NA	NA	-562	8845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.1939019325891	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCCATGCTTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	21672047	21693502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21689004_21689463
ES.10285.59	chr14	+	5421	13	NNC	ENSMUSG00000021767.20	novel	6977	17	NA	NA	-487	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.6678308703938	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGCCTCTCGTGTCCTG	NA	False	NA	5	True	AATAAA	-15	NA	21672122	21722196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398_21718714_21718808
ES.10285.6	chr14	+	7794	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	47.4657771452233	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531501	21722201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675830_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.60	chr14	+	9933	10	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	20	-1	intron_retention	FALSE	canonical	3	166	junction_5	13.1412083928645	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21672629	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.61	chr14	+	7010	11	ISM	ENSMUSG00000021767.20	ENSMUST00000182405.9	6977	17	123872	-346	1115	1	3prime_fragment	FALSE	canonical	3	97	junction_1	29.6182376248149	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATCTTCATTTTGCC	NA	False	NA	14	True	AATAAA	-24	NA	21673724	21722547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.62	chr14	+	5507	11	NNC	ENSMUSG00000021767.20	novel	6977	17	NA	NA	-920	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	71.8445544213338	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21674899	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711679_21712225_21712535_21714524_21714817_21718401
ES.10285.63	chr14	+	5815	10	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	109664	-1463	787	-142	3prime_fragment	FALSE	canonical	3	166	junction_5	13.1412083928645	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCTATACCAAATACCTA	NA	False	NA	NA	False	AATAAA	-5	NA	21676606	21722404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.64	chr14	+	5860	11	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	966	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	73.9841199177229	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21676785	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21707945_21708029_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.65	chr14	+	5653	9	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	111936	-1601	3059	-4	3prime_fragment	FALSE	canonical	3	166	junction_4	11.8532695911297	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTTTGATCTTCATT	NA	False	NA	9	True	AATAAA	-19	NA	21678878	21722542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.66	chr14	+	8073	7	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	5701	-2	intron_retention	FALSE	canonical	3	166	junction_2	12.5797456254091	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21681520	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.67	chr14	+	5397	7	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	117595	-1599	8718	-6	3prime_fragment	FALSE	canonical	3	166	junction_2	12.5797456254091	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGACTTTGATCTTCA	NA	False	NA	7	True	AATAAA	-17	NA	21684537	21722540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.68	chr14	+	4995	8	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	8741	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.2924873386949	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTCCTGTCATGTT	NA	False	NA	12	True	AATAAA	-22	NA	21684560	21722203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712412_21712453_21712535_21714524_21714817_21718398
ES.10285.69	chr14	+	7542	2	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	9680	8844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGCCATGCTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	21685499	21693501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21689004_21689463
ES.10285.70	chr14	+	7442	5	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	141215	-1253	32338	-7	3prime_fragment	FALSE	canonical	3	181	junction_1	9.8836987003854	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCCTCTCGTGTCC	NA	False	NA	3	True	AATAAA	-13	NA	21708157	21722194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.71	chr14	+	9718	3	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	32628	-1	intron_retention	FALSE	canonical	3	181	junction_1	2	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21708447	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21711043_21711495_21714817_21718398
ES.10285.72	chr14	+	4566	4	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	144550	-1259	35673	-1	3prime_fragment	FALSE	canonical	3	185	junction_3	8.60232526704263	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCGTGTCCTGTCAT	NA	False	NA	9	True	AATAAA	-19	NA	21711492	21722200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.73	chr14	+	4912	4	ISM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	144550	-1605	35673	0	3prime_fragment	FALSE	canonical	3	185	junction_3	8.60232526704263	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGATCTTCATTTTGC	NA	False	NA	13	True	AATAAA	-23	NA	21711492	21722546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.74	chr14	+	4405	5	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	35695	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	85.1968309269776	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21711514	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21711656_21712225_21712535_21714524_21714817_21718398_21720825_21720962
ES.10285.75	chr14	+	3869	4	NNC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	36629	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.5574896423239	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGATCTTCATTTTG	NA	False	NA	12	True	AATAAA	-22	NA	21712448	21722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21712535_21714524_21714817_21718398_21719769_21720424
ES.10285.76	chr14	+	5864	1	NIC	ENSMUSG00000021767.20	novel	6977	17	NA	NA	40509	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	543	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCTAGCCTCTCGTGT	NA	False	NA	1	True	AATAAA	-11	NA	21716328	21722192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21716300_21722200
ES.10285.77	chr14	+	4390	2	Genic_Genomic	ENSMUSG00000021767.20	novel	6791	17	NA	NA	41946	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTCGTGTCCTGTCA	NA	False	NA	8	True	AATAAA	-18	NA	21717765	21722199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_21718341_21718384
ES.10285.8	chr14	+	7248	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	47.1299732123836	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531501	21722201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10285.9	chr14	+	7467	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	-126	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	47.1299732123836	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATTTAATAAATTAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	21531501	21722420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ES.10286.1	chr14	-	3658	1	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	21582138	21578480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21578500_21582100
ES.10287.1	chr14	-	3362	16	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCCCACAGTCACTG	NA	False	NA	NA	False	NA	NA	NA	21719608	21608873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21608895_21659819_21659930_21668957_21669074_21669283_21669366_21672020_21672156_21674900_21674954_21676783_21676907_21678878_21678995_21681387_21681530_21684541_21684704_21687612_21687709_21710810_21711041_21711493_21711654_21712220_21712533_21714522_21714817_21718398
ES.10287.2	chr14	-	1419	1	Intergenic	novelGene_8637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATTATAGTTGAAATCAA	NA	False	NA	NA	False	AGTAAA	-35	NA	21634109	21632690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21632700_21634100
ES.10287.3	chr14	-	7369	3	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAATATTACATTAGCA	NA	False	NA	NA	False	AAGAAA	-29	NA	21684955	21672602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21676907_21678878_21681530_21684541
ES.10287.4	chr14	-	6120	11	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAATATTACATTAGCA	NA	False	NA	NA	False	AAGAAA	-29	NA	21720070	21672602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21675417_21676784_21676907_21678878_21678995_21681387_21681530_21684541_21684704_21687612_21687709_21710810_21711041_21711493_21711654_21712220_21712533_21714522_21714817_21718398
ES.10287.5	chr14	-	9520	10	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAATATTACATTAGCA	NA	False	NA	NA	False	AAGAAA	-29	NA	21719237	21672602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21676907_21678878_21678995_21681387_21681530_21684541_21684704_21687612_21687709_21707945_21711041_21711493_21711654_21712220_21712533_21714522_21714817_21718398
ES.10287.6	chr14	-	7001	10	Antisense	novelGene_ENSMUSG00000021767.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	21719608	21672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21676907_21678878_21678995_21681387_21681530_21684541_21684704_21687612_21687709_21710810_21711041_21711493_21711654_21712220_21712533_21714522_21714817_21718398
ES.10288.1	chr14	-	4746	6	NNC	ENSMUSG00000021768.16	novel	1745	8	NA	NA	-187	-3	intron_retention	FALSE	canonical	0	0	junction_3	0.748331477354788	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCTGGTTTGTATGA	NA	False	NA	NA	False	AATAAA	-12	NA	21796740	21783468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21783920_21784963_21785185_21790171_21793598_21793787_21793878_21794815_21795011_21796377
ES.10289.1	chr14	+	5253	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	-47	-3593	-30	-1831	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGGTTTTGCAATG	2584	False	NA	NA	False	NA	NA	NA	21800568	21846963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.2	chr14	+	5239	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	-15	-3650	-15	-1774	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCAAGGATTTGGTGGT	2599	False	NA	NA	False	ATTAAA	-19	NA	21800583	21847020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.3	chr14	+	7065	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	-28	-5424	-11	0	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTTGTTATAACCCTT	2603	False	NA	14	True	AATAAA	-18	NA	21800587	21848794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.4	chr14	+	1665	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	5	-57	5	57	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTGAGAAAGGCCGTGA	2636	False	NA	NA	False	NA	NA	NA	21800620	21843427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.5	chr14	+	1548	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	6	59	6	-59	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTCTCTGTAATGAGT	2637	False	NA	NA	False	AATGAA	-19	NA	21800621	21843311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.6	chr14	+	1538	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	26	10	9	-10	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGAATACTTTGTCC	2640	False	NA	NA	False	AATATA	-15	NA	21800624	21843360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.7	chr14	+	4548	5	NIC	ENSMUSG00000021770.12	novel	1574	6	NA	NA	9	-1831	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.6604597633658	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGGTTTTGCAATG	2640	False	NA	NA	False	NA	NA	NA	21800624	21846963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21800849_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.8	chr14	+	6971	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	27	-5424	10	0	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTTGTTATAACCCTT	2641	False	NA	14	True	AATAAA	-18	NA	21800625	21848794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ES.10289.9	chr14	+	3591	4	ISM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	29	6943	12	-6616	5prime_fragment	FALSE	canonical	3	20	junction_1	2.94392028877595	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATTAAAAATTA	2643	False	NA	NA	False	AAAAAG	-36	NA	21800627	21836427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746
ES.1029.1	chr1	+	169	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAAACAAAACAAAC	902	False	NA	NA	False	NA	NA	NA	92050045	92050214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_92050000_92050200
ES.10290.1	chr14	-	178	1	Intergenic	novelGene_8639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGAAGAC	9970	False	NA	NA	False	NA	NA	NA	21838877	21838699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21838700_21838900
ES.10291.1	chr14	+	178	1	Intergenic	novelGene_8640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	8553	False	NA	NA	False	NA	NA	NA	21865583	21865761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_21865600_21865800
ES.10292.1	chr14	-	176	1	Intergenic	novelGene_8641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAACAATAA	NA	False	NA	NA	False	NA	NA	NA	21869512	21869336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_21869300_21869500
ES.10293.1	chr14	+	1668	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	-22	308	-22	52	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATGGATCAGTGGCT	NA	False	NA	74	True	NA	NA	NA	21881314	21895639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.11	chr14	+	1641	9	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-49	-1	intron_retention	FALSE	canonical	2	2	junction_5	780.924732288586	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTGTGCATGTTTGT	NA	False	NA	21	True	AATAGA	-17	NA	21881584	21895586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21888314_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.12	chr14	+	1324	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	739.342350410898	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881588	21895587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888094_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.14	chr14	+	5395	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	741.794088097096	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	False	NA	12	True	AATAAA	-22	NA	21881589	21895947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21886520_21886718_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.15	chr14	+	1274	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_8	710.149280081308	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTGTGCATGTTTGT	NA	False	NA	21	True	AATAGA	-17	NA	21881590	21895586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890573_21893949_21894008_21895213
ES.10293.16	chr14	+	1781	11	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	939.65227611069	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21881591	21895945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21886811_21886896_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.18	chr14	+	1377	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-40	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	954.133593151529	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGATGGATCAGTGG	NA	False	NA	72	True	NA	NA	NA	21881593	21895637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888462_21888687_21890486_21890632_21893949_21894008_21895213
ES.10293.19	chr14	+	3131	9	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	2055	junction_4	148.129799500303	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTGTGCATGTTTG	NA	False	NA	20	True	AATAGA	-16	NA	21881597	21895585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21890638_21893949_21894008_21895213
ES.10293.2	chr14	+	5303	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-17	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	741.794088097096	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTGTGCATGTTTG	NA	False	NA	20	True	AATAGA	-16	NA	21881319	21895585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21886520_21886718_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.20	chr14	+	1324	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-36	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	730.683393969113	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTGTGCATGTTTG	NA	False	NA	20	True	AATAGA	-16	NA	21881597	21895585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883875_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.26	chr14	+	1579	11	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-22	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	939.65227611069	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGGCTCACGTATGT	NA	False	NA	14	True	AATAAA	-13	NA	21881611	21895763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21886811_21886896_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.28	chr14	+	5461	9	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-18	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	784.793036013317	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21881615	21895945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21886520_21886718_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.29	chr14	+	1443	11	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	-8	176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	703.754680268629	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGGCTCACGTATGT	NA	False	NA	14	True	AATAAA	-13	NA	21881625	21895763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213_21895528_21895565
ES.10293.3	chr14	+	1772	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	2	180	0	180	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTCACGTATGTGCAG	NA	False	NA	18	True	AATAAA	-17	NA	21881338	21895767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.32	chr14	+	1524	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	737.345656584448	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21881648	21895945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890602_21890638_21893949_21894008_21895213
ES.10293.34	chr14	+	1374	9	ISM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	579	184	122	176	3prime_fragment	FALSE	canonical	3	2055	junction_3	147.721391054241	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGGCTCACGTATGT	NA	False	NA	14	True	AATAAA	-13	NA	21881915	21895763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.35	chr14	+	2339	8	NNC	ENSMUSG00000021771.15	novel	1291	8	NA	NA	334	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	825.908479388928	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTCTGCAGTTTCT	NA	False	NA	7	True	AATAAA	-17	NA	21882127	21895942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890462_21890638_21893949_21894008_21895213
ES.10293.36	chr14	+	6001	5	NNC	ENSMUSG00000021771.15	novel	663	3	NA	NA	233	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	1027.61383189406	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTGTGCATGTTTG	NA	False	NA	20	True	AATAGA	-16	NA	21883918	21895585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21886512_21886718_21888112_21888458_21888687_21890486_21890638_21893949
ES.10293.37	chr14	+	4874	6	NNC	ENSMUSG00000021771.15	novel	663	3	NA	NA	343	179	intron_retention	FALSE	non_canonical	0	0	junction_1	955.985648427841	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCACGTATGTGCA	NA	False	NA	17	True	AATAAA	-16	NA	21884028	21895766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21886520_21886718_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.38	chr14	+	1163	4	ISM	ENSMUSG00000021771.15	ENSMUST00000172727.2	1291	8	5943	-633	559	-9	3prime_fragment	FALSE	canonical	3	2297	junction_1	97.6968099103889	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTAATACTCTGCAGT	NA	False	NA	3	True	AATAAA	-13	NA	21888457	21895938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.39	chr14	+	2822	1	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	781	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	639	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21893123	21895945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21893100_21895900
ES.10293.4	chr14	+	1459	11	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	686.96809241769	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGCATGTTTGTTT	NA	False	NA	23	True	AATAGA	-19	NA	21881339	21895588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21881513_21881645_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.5	chr14	+	2490	9	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	35	-2	intron_retention	FALSE	canonical	3	57	junction_1	764.93557735276	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGGTGTGCATGTTTG	NA	False	NA	20	True	AATAGA	-16	NA	21881373	21895585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21881513_21881645_21881736_21881918_21883021_21883868_21883919_21887811_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.6	chr14	+	5342	9	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	39	1	intron_retention	FALSE	non_canonical	0	0	junction_4	784.793036013317	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGCATGTTTGTTT	NA	False	NA	23	True	AATAGA	-19	NA	21881377	21895588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21886520_21886718_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.7	chr14	+	1314	10	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	2	28	junction_1	727.515406480623	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881393	21895587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21881513_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.8	chr14	+	1578	11	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	57	176	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	686.96809241769	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGGCTCACGTATGT	NA	False	NA	14	True	AATAAA	-13	NA	21881395	21895763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_21881513_21881645_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10293.9	chr14	+	1769	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	183	2	-114	-2	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGCAGTTTCTAAG	NA	False	NA	10	True	AATAAA	-20	NA	21881519	21895945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ES.10294.1	chr14	+	3764	3	NNC	ENSMUSG00000090564.10	novel	3835	3	NA	NA	13	-5	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGGCTGAATTCT	NA	False	NA	NA	False	NA	NA	NA	21898527	21906994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21899095_21899701_21899806_21903901
ES.10294.2	chr14	+	2413	4	NNC	ENSMUSG00000090564.10	novel	3835	3	NA	NA	36	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGGCTGAATTCT	NA	False	NA	NA	False	NA	NA	NA	21898550	21906994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_21899148_21899701_21899806_21903901_21904406_21905786
ES.10295.1	chr14	-	1809	1	Antisense	novelGene_ENSMUSG00000021771.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCGTGGG	1465	False	NA	NA	False	NA	NA	NA	21888351	21886542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_21886500_21888400
ES.10296.1	chr14	-	4498	4	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-21	1861	intron_retention	FALSE	canonical	3	276	junction_3	6.94422221866655	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGATTTGAGAGGGAGC	NA	False	NA	NA	False	NA	NA	NA	21898983	21894061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.10	chr14	-	1126	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	266	junction_1	10.0747208398049	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21898983	21897247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21897496_21897681_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.2	chr14	-	3398	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-2	905	intron_retention	FALSE	canonical	3	276	junction_4	6.05702071979286	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTTCTAAAAACCGTC	NA	False	NA	NA	False	AATAAA	-25	NA	21898964	21895017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.3	chr14	-	2841	5	NNC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-21	891	intron_retention	FALSE	canonical	0	0	junction_1	123.41089903246	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCCCTAAAAGCCATG	NA	False	NA	NA	False	AATAAA	-11	NA	21898983	21895031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21896995_21897681_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.4	chr14	-	1772	7	NNC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	9	876	intron_retention	FALSE	canonical	1	2	junction_1	104.159199732375	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAACAAGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	21898953	21895046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_21895324_21896723_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.5	chr14	-	1043	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	67	1204	-16	120	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTGAGTAGAGTTCCA	NA	False	NA	-8	True	AATAAA	-14	NA	21898978	21897126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.6	chr14	-	1050	6	FSM	ENSMUSG00000021773.12	ENSMUST00000022295.4	981	6	-68	-1	15	1	multi-exon	FALSE	canonical	3	266	junction_1	9.09065454189081	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAGCATCCTCTTCCA	NA	False	NA	-9	True	AATAAA	-18	NA	21899030	21897245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.7	chr14	-	1048	6	NIC	ENSMUSG00000021773.12	novel	2314	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	244	junction_2	16.9870538940689	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21898979	21897247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21897496_21897681_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.8	chr14	-	974	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	15	1325	15	-1	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21899030	21897247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ES.10296.9	chr14	-	1257	5	NIC	ENSMUSG00000021773.12	novel	981	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	276	junction_4	6.05702071979286	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGAGCATCCTCTTC	NA	False	NA	-11	True	AATAAA	-16	NA	21899053	21897247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ES.10297.1	chr14	-	2890	2	ISM	ENSMUSG00000039081.11	ENSMUST00000043409.9	4216	3	1727	339	1727	-339	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATGAAAACGAC	NA	False	NA	NA	False	NA	NA	NA	22037942	22034365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_22036585_22037271
ES.10297.2	chr14	-	4394	2	ISM	ENSMUSG00000039081.11	ENSMUST00000043409.9	4216	3	120	442	120	-442	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGTCTTCTCTTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	22039549	22034468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_22036585_22037271
ES.10298.1	chr14	+	1474	1	Intergenic	novelGene_8642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	22771811	22773285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_22771800_22773300
ES.10299.1	chr14	+	176	1	Intergenic	novelGene_8643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	23099903	23100079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_23099900_23100100
ES.103.1	chr1	-	3895	1	Antisense	novelGene_ENSMUSG00000016918.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	12877955	12874060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_12874100_12878000
ES.1030.1	chr1	-	8326	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_23	30.5727621745607	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	6596	False	NA	0	True	AATAAA	-23	NA	92108021	91856500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940539_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.11	chr1	-	8241	26	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	29.6994545404457	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCTGCTACCTCCTTG	6609	False	NA	-3	True	AATAAA	-20	NA	92108008	91856503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_92075977_92076217_92107723
ES.1030.12	chr1	-	5307	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	967	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTTGTGTATTTTAC	6607	False	NA	NA	False	AAAAAG	-14	NA	92108010	91859511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.13	chr1	-	4788	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	694	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTAGCTCTGAGGTG	6597	False	NA	NA	False	NA	NA	NA	92108020	91859784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.15	chr1	-	5085	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	692	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGTTAGCTCTGAGG	6554	False	NA	NA	False	NA	NA	NA	92108063	91859786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.16	chr1	-	5045	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	8	689	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGTGTGTTAGCTCTG	6606	False	NA	NA	False	NA	NA	NA	92108011	91859789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.17	chr1	-	5013	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	10	689	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGTGTGTTAGCTCTG	6608	False	NA	NA	False	NA	NA	NA	92108009	91859789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.18	chr1	-	3665	19	NNC	ENSMUSG00000026313.17	novel	3937	26	NA	NA	4965	687	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	24.287374152219	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACGTGTGTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	91915383	91859791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266
ES.1030.19	chr1	-	4838	11	ISM	ENSMUSG00000026313.17	ENSMUST00000189303.7	3287	23	39505	-888	8151	687	3prime_fragment	FALSE	canonical	3	98	junction_9	9.35093578204877	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACGTGTGTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	91895072	91859791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501
ES.1030.2	chr1	-	8304	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	6606	False	NA	0	True	AATAAA	-23	NA	92108011	91856500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.20	chr1	-	4999	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-22	685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	29.6994545404457	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAAGACGTGTGTTAGC	6576	False	NA	NA	False	NA	NA	NA	92108041	91859793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_92075977_92076217_92107723
ES.1030.21	chr1	-	4684	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	1	577	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	27.7003460555574	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAAACTTGATTCTTA	6599	False	NA	NA	False	NA	NA	NA	92108018	91859901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.22	chr1	-	4906	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	571	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAGCTAAGAAACTTGA	6597	False	NA	NA	False	NA	NA	NA	92108020	91859907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.23	chr1	-	4771	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	571	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	35.5333308317698	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAAGCTAAGAAACTTGA	6607	False	NA	NA	False	NA	NA	NA	92108010	91859907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923897_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.24	chr1	-	4930	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-5	561	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTGTATTCCAAGCTA	6593	False	NA	NA	False	NA	NA	NA	92108024	91859917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.25	chr1	-	4889	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	19	559	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCACTGTATTCCAAGC	6617	False	NA	NA	False	NA	NA	NA	92108000	91859919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.27	chr1	-	4683	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	7	553	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATATTCCACTGTATT	6561	False	NA	NA	False	NA	NA	NA	92108056	91859925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.29	chr1	-	4406	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	12	25	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6566	False	NA	NA	False	AAGAAA	-35	NA	92108051	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.3	chr1	-	7044	21	NNC	ENSMUSG00000026313.17	novel	3287	23	NA	NA	-3495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.8669107382564	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	7331	False	NA	0	True	AATAAA	-23	NA	91923843	91856500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903265_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778
ES.1030.30	chr1	-	6268	25	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-530	25	intron_retention	FALSE	canonical	0	0	junction_24	37.0759121787838	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6024	False	NA	NA	False	AAGAAA	-35	NA	92108593	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92108362
ES.1030.31	chr1	-	4360	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	25	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6597	False	NA	NA	False	AAGAAA	-35	NA	92108020	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.32	chr1	-	4214	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	31.5504928646131	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6607	False	NA	NA	False	AAGAAA	-35	NA	92108010	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.33	chr1	-	4383	29	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	273	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	42.5746043877745	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6871	False	NA	NA	False	AAGAAA	-35	NA	92107746	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92019453_92019541_92069241_92069304_92075977_92076217_92107590
ES.1030.34	chr1	-	3775	1	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1642	25	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	NA	False	NA	NA	False	AAGAAA	-35	NA	91864228	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91860500_91864200
ES.1030.35	chr1	-	4433	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6554	False	NA	NA	False	AAGAAA	-35	NA	92108063	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.36	chr1	-	4208	28	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-3	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	38.6259186456562	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6595	False	NA	NA	False	AAGAAA	-35	NA	92108022	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92019453_92019541_92075977_92076217_92107979
ES.1030.39	chr1	-	4456	28	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	5	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	34.889635912424	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6603	False	NA	NA	False	AAGAAA	-35	NA	92108014	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92019453_92019541_92075977_92076217_92107723
ES.1030.4	chr1	-	8074	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	29.6698799314714	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6594	False	NA	-1	True	AATAAA	-22	NA	92108023	91856501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.40	chr1	-	4424	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-6	25	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	23.5064198709189	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6548	False	NA	NA	False	AAGAAA	-35	NA	92108069	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.42	chr1	-	4002	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	34.2229396750192	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6597	False	NA	NA	False	AAGAAA	-35	NA	92108020	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.43	chr1	-	4189	28	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	1	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	39.8212053441596	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6599	False	NA	NA	False	AAGAAA	-35	NA	92108018	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92019453_92019541_92075977_92076217_92107979
ES.1030.44	chr1	-	4187	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1891	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	29.3440366208724	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	4663	False	NA	NA	False	AAGAAA	-35	NA	92109954	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92109860
ES.1030.46	chr1	-	4140	27	FSM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	7	3953	7	25	multi-exon	FALSE	canonical	3	12	junction_26	29.6698799314714	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6561	False	NA	NA	False	AAGAAA	-35	NA	92108056	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.47	chr1	-	4558	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	29.3350367086565	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6607	False	NA	NA	False	AAGAAA	-35	NA	92108010	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075784_92076217_92107723
ES.1030.48	chr1	-	4154	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	8	25	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	29.6698799314714	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6562	False	NA	NA	False	AAGAAA	-35	NA	92108055	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.49	chr1	-	4155	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	7	25	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6561	False	NA	NA	False	AAGAAA	-35	NA	92108056	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.50	chr1	-	4632	26	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	11	25	intron_retention	FALSE	canonical	3	55	junction_10	20.9633585095519	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6609	False	NA	NA	False	AAGAAA	-35	NA	92108008	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.51	chr1	-	4293	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	9	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	31.5243144255351	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6607	False	NA	NA	False	AAGAAA	-35	NA	92108010	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_92075977_92076217_92107723
ES.1030.53	chr1	-	4134	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	25	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	27.7003460555574	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6597	False	NA	NA	False	AAGAAA	-35	NA	92108020	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.54	chr1	-	4296	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-532	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	31.1969312707205	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGACAGAACAGAAATGTG	6022	False	NA	NA	False	AAGAAA	-35	NA	92108595	91860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92108362
ES.1030.55	chr1	-	4373	28	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	35.4562656861384	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6621	False	NA	NA	False	AAGAAA	-10	NA	92107996	91860478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92069241_92069304_92075977_92076217_92107723
ES.1030.56	chr1	-	4412	26	NIC	ENSMUSG00000026313.17	novel	3937	26	NA	NA	9	0	intron_retention	FALSE	canonical	3	32	junction_11	23.6072531227163	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6607	False	NA	NA	False	AAGAAA	-10	NA	92108010	91860478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.57	chr1	-	4087	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	29.3440366208724	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6597	False	NA	NA	False	AAGAAA	-10	NA	92108020	91860478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107986
ES.1030.59	chr1	-	3750	2	NIC	ENSMUSG00000026313.17	novel	3937	26	NA	NA	-2446	0	intron_retention	FALSE	canonical	3	113	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	91865032	91860478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861520_91862323
ES.1030.6	chr1	-	8071	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6597	False	NA	-1	True	AATAAA	-22	NA	92108020	91856501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.61	chr1	-	4184	26	NIC	ENSMUSG00000026313.17	novel	3937	26	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_22	31.5504928646131	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6597	False	NA	NA	False	AAGAAA	-10	NA	92108020	91860478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.62	chr1	-	4413	28	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	34.0370571877585	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	6595	False	NA	NA	False	AAGAAA	-9	NA	92108022	91860479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92069241_92069304_92075977_92076217_92107723
ES.1030.63	chr1	-	4209	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-530	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	37.3257230338543	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACGAAAAAAAAAAAAAAAAA	6024	False	NA	NA	False	AAGAAA	-7	NA	92108593	91860481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_92075977_92076217_92108362
ES.1030.64	chr1	-	4157	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	29.6863605044472	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACGAAAAAAAAAAAAAAAAA	6651	False	NA	NA	False	AAGAAA	-7	NA	92107966	91860481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.65	chr1	-	3928	26	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	36.2101864121134	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACGAAAAAAAAAAAAAAAAA	6609	False	NA	NA	False	AAGAAA	-7	NA	92108008	91860481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ES.1030.66	chr1	-	4254	26	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	18	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	29.6994545404457	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACGAAAAAAAAAAAAAAA	6616	False	NA	NA	False	AAGAAA	-5	NA	92108001	91860483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_92075977_92076217_92107723
ES.1030.67	chr1	-	5200	3	FSM	ENSMUSG00000026313.17	ENSMUST00000191327.2	589	3	-4170	-441	-4170	-5	multi-exon	FALSE	canonical	3	113	junction_2	7.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-5	NA	91866756	91860483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_91861109_91861377_91861520_91862323
ES.1030.68	chr1	-	4395	28	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	35.1354033795646	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACGAAAAAAAAAAAAAAA	6617	False	NA	NA	False	AAGAAA	-5	NA	92108000	91860483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91976556_91976612_91982622_91982695_92075977_92076217_92107723
ES.1030.7	chr1	-	6286	16	NNC	ENSMUSG00000026313.17	novel	3937	26	NA	NA	-51	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	41.0022221620027	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	NA	False	NA	-1	True	AATAAA	-22	NA	91903274	91856501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91897860_91898002_91898664_91898799_91900421_91900609_91903160
ES.1030.70	chr1	-	4199	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-1	35	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGTCTCCGTGTAAA	6597	False	NA	NA	False	ATTAAA	-33	NA	92108020	91860644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.71	chr1	-	4157	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGCTTAACATTTGATT	6593	False	NA	NA	False	ATTAAA	-2	NA	92108024	91860675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.72	chr1	-	4112	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	23.5064198709189	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGTGCTTAACATTT	6619	False	NA	NA	False	AATACA	-15	NA	92107998	91860679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.73	chr1	-	3859	25	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	37.6083619543432	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGGTGCTTAACATT	6663	False	NA	NA	False	AATACA	-14	NA	92107954	91860680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91957676_91957919_92075977_92076217_92107723
ES.1030.74	chr1	-	3504	20	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-8	-2550	combination_of_known_junctions	FALSE	canonical	3	55	junction_4	23.6065393071696	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGGAGTGGCTGATTTT	6546	False	NA	NA	False	AATGAA	-20	NA	92108071	91885645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.75	chr1	-	3264	5	NNC	ENSMUSG00000026313.17	novel	3287	23	NA	NA	8123	-13246	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_4	19.1115148536164	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAATGTGATGTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	91912225	91896341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099
ES.1030.76	chr1	-	2891	11	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	1	5720	combination_of_known_junctions	FALSE	canonical	3	81	junction_10	16.2345310988645	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCGGACTCTCCTGC	6555	False	NA	NA	False	NA	NA	NA	92108062	91911052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.77	chr1	-	2472	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92014744	92012272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92012300_92014700
ES.1030.8	chr1	-	8343	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6596	False	NA	-1	True	AATAAA	-22	NA	92108021	91856501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.1030.9	chr1	-	8329	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	6595	False	NA	-1	True	AATAAA	-22	NA	92108022	91856501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
ES.10300.1	chr14	-	175	1	Intergenic	novelGene_8644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTAATTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	23232535	23232360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_23232400_23232500
ES.10301.1	chr14	+	1980	1	Intergenic	novelGene_8645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGTTGGCCTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	23482666	23484646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_23482700_23484600
ES.10302.1	chr14	+	3251	1	Intergenic	novelGene_8646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTCCATCCCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	23508100	23511351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_23508100_23511400
ES.10303.1	chr14	+	2989	1	Antisense	novelGene_ENSMUSG00000063142.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-25	NA	23520703	23523692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_23520700_23523700
ES.10304.1	chr14	-	4679	18	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	293442	-2403	33424	2403	3prime_fragment	FALSE	canonical	0	0	junction_9	1.40439251603686	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTGTTTATTTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	23559930	23356679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857
ES.10305.1	chr14	-	176	1	Intergenic	novelGene_8647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATTTATTTTTG	687	False	NA	NA	False	NA	NA	NA	23988697	23988521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_23988500_23988700
ES.10306.1	chr14	+	409	1	FSM	ENSMUSG00000090381.3	ENSMUST00000109467.4	904	1	733	-238	733	238	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAATTTTTGTCTG	1505	False	NA	5	True	AATATA	-3	NA	24120534	24120943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_24120500_24120900
ES.10307.1	chr14	+	1619	1	Intergenic	novelGene_8648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAATCCACAGGGAAGC	NA	False	NA	NA	False	NA	NA	NA	24177628	24179247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_24177600_24179200
ES.10308.1	chr14	+	711	1	NIC	ENSMUSG00000118519.2	novel	1190	4	NA	NA	73355	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24205543	24206254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24205500_24206300
ES.10309.1	chr14	+	3213	3	Antisense	novelGene_ENSMUSG00000021782.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24206662	24210868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_24206684_24207012_24207145_24207808
ES.10309.2	chr14	+	3994	1	Antisense	novelGene_ENSMUSG00000021782.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGTGCTTTGGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	24206897	24210891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_24206900_24210900
ES.10309.3	chr14	+	2319	2	Antisense	novelGene_ENSMUSG00000021782.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGTGCTTTGGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	24207082	24210891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_24208820_24210309
ES.1031.1	chr1	-	122	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTGCTTCCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	92236806	92236684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92236700_92236800
ES.10310.1	chr14	-	4814	1	Genic_Genomic	ENSMUSG00000021782.15	novel	NA	NA	NA	NA	7894	472	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24188362	24183548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_24183500_24188400
ES.10310.10	chr14	-	4233	18	NNC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	-772	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.5607466456847	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24208105	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199530_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802
ES.10310.11	chr14	-	7711	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7380794632887	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24295840	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186630_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.12	chr14	-	7649	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	232	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	34.2009425967432	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24295756	24184022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214450_24214642_24215312_24215441_24216228_24216377_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.14	chr14	-	7208	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	-393	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	34.4575324140083	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24295326	24184022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214450_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241211_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.17	chr14	-	5060	5	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	36189	2	4588	0	3prime_fragment	FALSE	canonical	3	145	junction_4	6.49519052838329	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24191668	24184022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675
ES.10310.18	chr14	-	2019	4	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	7861	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	73.1406559688629	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24188395	24184022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186647_24186747_24187197_24187308_24188304
ES.10310.19	chr14	-	2479	1	NIC	ENSMUSG00000021782.15	novel	2334	6	NA	NA	9755	0	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24186501	24184022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24184000_24186500
ES.10310.2	chr14	-	7800	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	53	-2	53	0	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24295935	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.23	chr14	-	7608	31	NIC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	132	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	26.0743594786568	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTGTGTGTAGACCC	NA	False	NA	-7	True	AATAAA	-13	NA	24295856	24184023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24185742_24186636_24186747_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.27	chr14	-	7421	10	NIC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	-2237	-1	intron_retention	FALSE	canonical	3	90	junction_9	27.0038863229575	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTGTGTGTAGACCC	NA	False	NA	-7	True	AATAAA	-13	NA	24202851	24184023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24199581_24200206_24200341_24200579
ES.10310.28	chr14	-	6663	28	NNC	ENSMUSG00000021782.15	novel	7784	31	NA	NA	-12660	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_23	30.9517523564806	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTGTGTGTAGACCC	5402	False	NA	-7	True	AATAAA	-13	NA	24240517	24184023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216377_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385
ES.10310.3	chr14	-	7015	23	ISM	ENSMUSG00000021782.15	ENSMUST00000073687.13	7784	31	78247	0	10116	0	3prime_fragment	FALSE	canonical	3	79	junction_16	23.9785113854981	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24217741	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228
ES.10310.31	chr14	-	7544	31	FSM	ENSMUSG00000021782.15	ENSMUST00000073687.13	7784	31	237	3	237	-1	multi-exon	FALSE	canonical	2	6	junction_30	29.8062074071828	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTGTGTGTAGACCC	NA	False	NA	-7	True	AATAAA	-13	NA	24295751	24184023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24295214
ES.10310.33	chr14	-	4921	18	NIC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	-1456	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	37.5607466456847	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATCCCTGTGTGTAGACC	NA	False	NA	-8	True	AATAAA	-12	NA	24208789	24184024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199538_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802
ES.10310.34	chr14	-	7521	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	238	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.7831396715568	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAATCCCTGTGTGTAGA	NA	False	NA	-10	True	AATAAA	-10	NA	24295750	24184026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198457_24199429_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220583_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.35	chr14	-	2013	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33310	378	1709	-376	3prime_fragment	FALSE	canonical	3	145	junction_4	6.05309838016862	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTCTTTGTAACTCT	NA	False	NA	NA	False	AAGAAA	-12	NA	24194547	24184398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
ES.10310.36	chr14	-	6984	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	248	619	248	-619	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCCCCATTCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	24295740	24184641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.37	chr14	-	6734	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	380	-726	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	28.4139535711633	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGAAATGAGAGCTT	NA	False	NA	NA	False	CATAAA	-15	NA	24295608	24184748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186647_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.38	chr14	-	6314	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	241	1296	241	-1296	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTCTATGTTTACT	NA	False	NA	NA	False	NA	NA	NA	24295747	24185318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.39	chr14	-	5045	31	NIC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	489	-1297	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	30.5010200193735	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTTGTCTATGTTTAC	NA	False	NA	NA	False	NA	NA	NA	24295499	24185319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.4	chr14	-	12077	23	NNC	ENSMUSG00000021782.15	novel	7784	31	NA	NA	1108	0	intron_retention	FALSE	canonical	2	11	junction_9	32.240188462013	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24226749	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198457_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463
ES.10310.41	chr14	-	2480	1	NIC	ENSMUSG00000021782.15	novel	2334	6	NA	NA	1587	2262	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCTCCCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	24194669	24192189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24192200_24194700
ES.10310.42	chr14	-	3392	14	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	436	-4976	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	26.0336605050066	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTGTCCTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	24295552	24209351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216377_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ES.10310.43	chr14	-	163	1	Intergenic	novelGene_8649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTTTTTTTAAAGGG	NA	False	NA	NA	False	NA	NA	NA	24216577	24216414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_24216400_24216600
ES.10310.5	chr14	-	7666	31	NIC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_28	29.5535107897522	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24295945	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24242859_24243023_24252365_24252435_24295214
ES.10310.7	chr14	-	3430	13	NNC	ENSMUSG00000021782.15	novel	6336	27	NA	NA	-1562	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_12	42.4231331023797	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24202176	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24202104
ES.10310.9	chr14	-	7265	32	NNC	ENSMUSG00000021782.15	novel	7851	32	NA	NA	19291	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	30.0773197158644	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24275642	24184020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24275456
ES.10311.1	chr14	-	162	1	Intergenic	novelGene_8650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAGAGGAATCAA	NA	False	NA	NA	False	NA	NA	NA	24299930	24299768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_24299800_24299900
ES.10312.1	chr14	+	220	1	Intergenic	novelGene_8651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	24390102	24390322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_24390100_24390300
ES.10313.1	chr14	-	4060	1	Genic_Genomic	ENSMUSG00000114575.2	novel	NA	NA	NA	NA	3830	473	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACTATTTTCTTGGATA	NA	False	NA	NA	False	AATAAA	-22	NA	24492641	24488581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_24488600_24492600
ES.10314.1	chr14	+	174	1	Intergenic	novelGene_8652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTCACTATGT	NA	False	NA	NA	False	NA	NA	NA	24531026	24531200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_24531000_24531200
ES.10315.1	chr14	-	4867	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	26	-206	-17	206	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTAGCCTGTGGCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	24537094	24498557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.10	chr14	-	5766	30	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	105	junction_22	15.9718092911634	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24537096	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.11	chr14	-	4629	31	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.6195130877527	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24537100	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502297_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.12	chr14	-	5267	14	NIC	ENSMUSG00000025280.9	novel	4835	30	NA	NA	10033	-1	intron_retention	FALSE	canonical	3	119	junction_13	15.662490525694	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24519460	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502744_24503238_24503404_24504637_24504731_24504922_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24517176_24519332
ES.10315.13	chr14	-	4794	30	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	105	junction_22	16.0996451242638	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24537081	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.14	chr14	-	4511	31	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	38.0811414394754	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24537074	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519512_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529801_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.15	chr14	-	5473	30	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_17	29.7492093640881	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTAAGTGTTTTTTGT	NA	False	NA	-4	True	AATACA	-25	NA	24537103	24498764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519512_24520601_24520741_24520887_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.17	chr14	-	4832	31	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	29.3174957244911	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGATATTAAGTGTTTT	NA	False	NA	-8	True	AATACA	-21	NA	24537115	24498768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502105_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.2	chr14	-	4768	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	-68	-13	-62	13	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTAACTTTGAGTCAG	NA	False	NA	10	True	AATACA	-39	NA	24537188	24498750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.23	chr14	-	4697	31	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	29.6231140984348	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGGGATATTAAGTGTT	NA	False	NA	-10	True	AATACA	-19	NA	24537123	24498770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519512_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.24	chr14	-	5843	30	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	2	2	intron_retention	FALSE	canonical	3	105	junction_23	16.0922577968044	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGGGATATTAAGTGTT	NA	False	NA	-10	True	AATACA	-19	NA	24537124	24498770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24534324_24534454_24534591_24536940
ES.10315.28	chr14	-	4654	31	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	29.5719273786625	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGGGATATTAAGTGT	NA	False	NA	-11	True	AATACA	-18	NA	24537103	24498771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525815_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.3	chr14	-	4617	32	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-10	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_28	29.221889647101	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGTTTTTTGTTAA	NA	False	NA	-1	True	AATACA	-28	NA	24537087	24498761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24532916_24532954_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.30	chr14	-	4799	32	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.326246787905	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGAGGGATATTAAGT	NA	False	NA	-13	True	AATACA	-16	NA	24537137	24498773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24502831_24502937_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.31	chr14	-	6738	28	NIC	ENSMUSG00000025280.9	novel	4835	30	NA	NA	19	-1	intron_retention	FALSE	canonical	3	105	junction_20	15.4003723255011	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGAGGGATATTAAGT	NA	False	NA	-13	True	AATACA	-16	NA	24537101	24498773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24520741_24520887_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.33	chr14	-	4789	32	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	37.3578749671385	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTTCTGAGGGATAT	NA	False	NA	-18	True	AATACA	-11	NA	24537074	24498778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24516599_24516763_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.34	chr14	-	4454	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	-30	263	-24	132	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGCCCTCAGCAGGAG	NA	False	NA	NA	False	CATAAA	-20	NA	24537150	24499026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.35	chr14	-	3853	4	ISM	ENSMUSG00000025280.9	ENSMUST00000223718.2	4835	30	2754	28964	2754	6134	intron_retention	FALSE	canonical	3	128	junction_2	7.84573486395988	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGTGTCTTTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	24534323	24527736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_24529311_24529426_24529590_24529703_24529944_24532447
ES.10315.4	chr14	-	5733	28	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	36	2	intron_retention	FALSE	canonical	3	105	junction_20	15.549999007582	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGTTTTTTGTTAA	NA	False	NA	-1	True	AATACA	-28	NA	24537041	24498761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.7	chr14	-	5411	30	NNC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	21	1	intron_retention	FALSE	canonical	0	0	junction_1	28.6489681652276	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAAGTGTTTTTTGTTA	NA	False	NA	-2	True	AATACA	-27	NA	24537056	24498762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_24499288_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.8	chr14	-	5797	29	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	-2	1	intron_retention	FALSE	canonical	3	105	junction_21	16.3402517278839	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAAGTGTTTTTTGTTA	NA	False	NA	-2	True	AATACA	-27	NA	24537128	24498762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502744_24503238_24503404_24504637_24504731_24504922_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10315.9	chr14	-	4852	30	NIC	ENSMUSG00000025280.9	novel	4687	31	NA	NA	21	0	intron_retention	FALSE	canonical	3	105	junction_22	16.1661262683911	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTAAGTGTTTTTTGTT	NA	False	NA	-3	True	AATACA	-26	NA	24537099	24498763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_24499291_24500762_24500896_24502260_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ES.10316.1	chr14	+	156	1	Intergenic	novelGene_8653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	24537270	24537426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_24537300_24537400
ES.10317.1	chr14	+	637	6	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	-1425	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5866.68211513118	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24539323	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24539455_24540804_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.11	chr14	+	4090	3	FSM	ENSMUSG00000025290.18	ENSMUST00000225994.2	4059	3	-31	0	6	0	multi-exon	FALSE	canonical	3	9630	junction_1	1373	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540754	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_24540827_24541817_24541884_24541974
ES.10317.12	chr14	+	579	6	NNC	ENSMUSG00000025290.18	novel	525	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5845.6342136675	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540754	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24544119_24544156_24545842
ES.10317.13	chr14	+	566	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24540756	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545815
ES.10317.15	chr14	+	606	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6383.72126486582	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACACGTCTGCTCTGCTG	NA	False	NA	12	True	AATAAA	-11	NA	24540784	24545921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541732_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.16	chr14	+	790	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	0	265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTGAGGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	24540785	24546191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.17	chr14	+	2230	5	ISM	ENSMUSG00000025290.18	ENSMUST00000223999.2	525	7	-11	-9	1	-4	intron_retention	FALSE	canonical	3	88	junction_4	5211.03993340101	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACGTCTGCTCTGCTGC	NA	False	NA	13	True	AATAAA	-12	NA	24540786	24545922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24544119
ES.10317.18	chr14	+	3030	4	ISM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	-19	-36	17	1	intron_retention	FALSE	canonical	3	776	junction_1	5669.1234086252	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTCTGCTGCTTATT	NA	False	NA	18	True	AATAAA	-17	NA	24540815	24545927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450
ES.10317.19	chr14	+	3751	3	ISM	ENSMUSG00000025290.18	ENSMUST00000223931.2	461	4	3626	-2365	-16	0	3prime_fragment	FALSE	canonical	3	12376	junction_1	405.5	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540818	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_24541884_24541974_24542185_24543450
ES.10317.2	chr14	+	590	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	-23	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTGCTTATTGGGC	NA	False	NA	22	True	AATAAA	-21	NA	24540725	24545931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.20	chr14	+	2697	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	776	junction_1	5253.22793028248	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24540820	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24545518_24545842
ES.10317.21	chr14	+	779	6	NNC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6131.80233210432	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540820	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24544119_24544156_24545842
ES.10317.22	chr14	+	741	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	776	junction_1	5312.66281515212	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24540820	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.23	chr14	+	1463	4	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	4092	junction_3	4109.62828813832	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACACGTCTGCTCTGCTG	NA	False	NA	12	True	AATAAA	-11	NA	24540820	24545921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.24	chr14	+	751	5	NNC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6209.44423338353	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24540823	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.25	chr14	+	997	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	-3	265	combination_of_known_junctions	FALSE	canonical	3	776	junction_1	5312.66281515212	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTGAGGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	24540831	24546191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.26	chr14	+	905	5	NNC	ENSMUSG00000025290.18	novel	714	6	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5566.68781121234	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24540859	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24541296_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.27	chr14	+	1542	4	ISM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	1059	3	628	-3	3prime_fragment	FALSE	canonical	3	4092	junction_3	4109.62828813832	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACATCTTGGGACTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	24541844	24547024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.28	chr14	+	3951	1	NIC	ENSMUSG00000025290.18	novel	4059	3	NA	NA	757	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	878	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTCTGCTCTGCTGCTT	NA	False	NA	15	True	AATAAA	-14	NA	24541973	24545924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_24542000_24545900
ES.10317.3	chr14	+	573	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-57	1097	-20	4	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCTGCTTATTGGG	NA	False	NA	21	True	AATAAA	-20	NA	24540728	24545930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.4	chr14	+	821	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-44	836	-7	265	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTGAGGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	24540741	24546191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ES.10317.5	chr14	+	1560	4	NNC	ENSMUSG00000025290.18	novel	686	4	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	6034.34674730137	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540741	24545926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24541884_24541974_24542185_24543450_24543567_24545834
ES.10317.6	chr14	+	2833	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	-48	-16	0	3	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGCTGCTTATTGG	NA	False	NA	20	True	AATAAA	-19	NA	24540748	24545929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
ES.10317.7	chr14	+	2912	4	NNC	ENSMUSG00000025290.18	novel	468	5	NA	NA	0	-3	intron_retention	FALSE	canonical	3	54	junction_1	6008.92941102379	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTCTGCTCTGCTGCT	NA	False	NA	14	True	AATAAA	-13	NA	24540748	24545923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541732_24541884_24541974_24542185_24543450
ES.10317.9	chr14	+	1663	5	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5247.91465131627	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGGACTGGAGAGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	24540751	24547030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543567_24545834
ES.10318.1	chr14	-	3268	1	Antisense	novelGene_ENSMUSG00000025290.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGAAGTCCTCATGTC	NA	False	NA	NA	False	NA	NA	NA	24546146	24542878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_24542900_24546100
ES.10319.1	chr14	-	274	1	Antisense	novelGene_ENSMUSG00000025290.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	24546489	24546215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_24546200_24546500
ES.1032.1	chr1	-	4055	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAGGAATGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	92269076	92265021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92265000_92269100
ES.10320.1	chr14	+	7492	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	-10	0	-10	0	multi-exon	FALSE	canonical	3	6	junction_3	25.4924281726925	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	311	False	NA	NA	False	AATAAA	-16	NA	25459637	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.10	chr14	+	6933	22	NNC	ENSMUSG00000007817.16	novel	460	2	NA	NA	-38212	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8045709134166	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	5286	False	NA	13	True	AATAAA	-24	NA	25569568	25667026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25569679_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.11	chr14	+	1747	2	ISM	ENSMUSG00000007817.16	ENSMUST00000159766.8	4314	11	111661	72873	-36404	4671	internal_fragment	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7094	False	NA	NA	False	NA	NA	NA	25571376	25577125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25572553_25576554
ES.10320.12	chr14	+	6899	22	NNC	ENSMUSG00000007817.16	novel	460	2	NA	NA	-35934	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.5645985339428	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAGGTGTTCATGTGG	425	False	NA	11	True	AATAAA	-22	NA	25571846	25667024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25571943_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.13	chr14	+	4563	1	NIC	ENSMUSG00000007817.16	novel	7482	24	NA	NA	-35192	4697	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTAAGCTTGATTTCT	1167	False	NA	NA	False	NA	NA	NA	25572588	25577151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25572600_25577200
ES.10320.14	chr14	+	2980	1	Intergenic	novelGene_8655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAGAAAG	610	False	NA	NA	False	NA	NA	NA	25598220	25601200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25598200_25601200
ES.10320.15	chr14	+	5118	19	NNC	ENSMUSG00000007817.16	novel	460	2	NA	NA	-2960	167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5566366950506	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGGTTATAGCCTTTG	7210	False	NA	NA	False	NA	NA	NA	25604820	25665310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25605161_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.16	chr14	+	6784	19	NNC	ENSMUSG00000007817.16	novel	460	2	NA	NA	-595	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5566366950506	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCTGGTGAGTTAGCT	9575	False	NA	NA	False	AATAAA	-14	NA	25607185	25667165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25607337_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.17	chr14	+	6954	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-223	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.0973971017322	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	133	False	NA	NA	False	AATAAA	-16	NA	25607557	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.18	chr14	+	3558	18	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-217	-2784	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.482566699667	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGTCTTGCTGGTCTTGT	139	False	NA	NA	False	NA	NA	NA	25607563	25662359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690
ES.10320.19	chr14	+	5147	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-217	223	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.0973971017322	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGTCCTTTTTTAAAAA	139	False	NA	NA	False	TTTAAA	-23	NA	25607563	25665366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.2	chr14	+	7338	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	2	142	2	-142	multi-exon	FALSE	canonical	3	6	junction_3	25.4924281726925	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAGGTGTTCATGTGGT	323	False	NA	12	True	AATAAA	-23	NA	25459649	25667025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.20	chr14	+	6721	19	NNC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-199	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.2432785983389	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	157	False	NA	13	True	AATAAA	-24	NA	25607581	25667026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25607823_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653962_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.21	chr14	+	6875	19	NNC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-198	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	18.0263866951741	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	158	False	NA	NA	False	AATAAA	-16	NA	25607582	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25607823_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.22	chr14	+	6255	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-198	-692	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTGTTTTTATTTTA	158	False	NA	NA	False	AATAGA	-34	NA	25607582	25666475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.23	chr14	+	6671	18	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-198	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	21.7583456525613	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTCTGGTGAGTTAGC	158	False	NA	NA	False	AATAAA	-13	NA	25607582	25667164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25663363
ES.10320.24	chr14	+	5142	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-194	223	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGTCCTTTTTTAAAAA	162	False	NA	NA	False	TTTAAA	-23	NA	25607586	25665366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.25	chr14	+	4855	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-178	-48	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGACCCCTAGCTGTT	3	True	NA	NA	False	AATATA	-12	NA	25607602	25665095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.26	chr14	+	4059	20	NNC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-160	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	20.2103892539212	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAGGTGTTCATGTGG	-17	True	NA	11	True	AATAAA	-22	NA	25607620	25667024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363_25663495_25666201
ES.10320.27	chr14	+	6755	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-149	-143	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAGGTGTTCATGTGG	-6	True	NA	11	True	AATAAA	-22	NA	25607631	25667024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.28	chr14	+	3488	18	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-136	-2791	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.7077549004891	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACCATCGTCTTGCTG	7	True	NA	NA	False	NA	NA	NA	25607644	25662352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690
ES.10320.29	chr14	+	6817	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	75	False	NA	NA	False	AATAAA	-16	NA	25607712	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.3	chr14	+	7313	24	FSM	ENSMUSG00000007817.16	ENSMUST00000007961.15	5397	24	-37	-1879	6	-145	multi-exon	FALSE	canonical	3	6	junction_3	26.0591881194375	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTAGGTGTTCATGT	327	False	NA	9	True	AATAAA	-20	NA	25459653	25667022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.30	chr14	+	4861	19	NNC	ENSMUSG00000007817.16	novel	359	3	NA	NA	-7	219	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.4536486152198	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCGAGTCCTTTTTTA	-1	True	NA	NA	False	TTTAAA	-19	NA	25607773	25665362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25607823_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.31	chr14	+	6566	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	20	-145	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.0973971017322	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTAGGTGTTCATGT	-3	True	NA	9	True	AATAAA	-20	NA	25607800	25667022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.32	chr14	+	7257	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	234	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	67	False	NA	NA	False	AATAAA	-16	NA	25608014	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.33	chr14	+	7094	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	238	-141	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	71	False	NA	13	True	AATAAA	-24	NA	25608018	25667026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.34	chr14	+	5427	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-236	223	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGTCCTTTTTTAAAAA	78	False	NA	NA	False	TTTAAA	-23	NA	25608025	25665366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.35	chr14	+	5413	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-204	223	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGTCCTTTTTTAAAAA	110	False	NA	NA	False	TTTAAA	-23	NA	25608057	25665366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.36	chr14	+	7072	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-203	-141	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	111	False	NA	13	True	AATAAA	-24	NA	25608058	25667026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.38	chr14	+	6911	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	19.8931401297395	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	158	False	NA	NA	False	AATAAA	-16	NA	25608105	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25663363
ES.10320.39	chr14	+	6742	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-152	-147	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	21.187905409458	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATATTAGGTGTTCAT	162	False	NA	7	True	AATAAA	-18	NA	25608109	25667020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25663363
ES.10320.4	chr14	+	5605	24	FSM	ENSMUSG00000007817.16	ENSMUST00000007961.15	5397	24	9	-217	9	217	multi-exon	FALSE	canonical	3	6	junction_3	26.0591881194375	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCCGAGTCCTTTTT	373	False	NA	NA	False	TTTAAA	-17	NA	25459699	25665360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.40	chr14	+	3694	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	-76	-2786	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.7971286843441	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCGTCTTGCTGGTCTT	238	False	NA	NA	False	NA	NA	NA	25608185	25662357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690
ES.10320.41	chr14	+	6901	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	91	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	405	False	NA	NA	False	AATAAA	-16	NA	25608352	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.42	chr14	+	4994	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	91	117	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.3386234819201	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTGTGAATATTTTAG	405	False	NA	NA	False	NA	NA	NA	25608352	25665260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.43	chr14	+	5011	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	92	117	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTGTGAATATTTTAG	406	False	NA	NA	False	NA	NA	NA	25608353	25665260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.44	chr14	+	4720	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	99	106	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	21.187905409458	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTAAATATCTTTGT	413	False	NA	NA	False	NA	NA	NA	25608360	25665249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25663363
ES.10320.45	chr14	+	3473	18	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	123	-2790	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	16.6866086001438	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCATCGTCTTGCTGG	437	False	NA	NA	False	NA	NA	NA	25608384	25662353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690
ES.10320.46	chr14	+	4109	14	ISM	ENSMUSG00000007817.16	ENSMUST00000007961.15	5397	24	187449	-174	-10114	174	3prime_fragment	FALSE	canonical	3	49	junction_1	9.62061396261961	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATAGCCTTTGCTGGTGT	2405	False	NA	NA	False	NA	NA	NA	25647139	25665317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.47	chr14	+	8000	13	ISM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	187970	141	-9636	-141	3prime_fragment	FALSE	canonical	3	52	junction_12	8.5146931829632	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	2883	False	NA	13	True	AATAAA	-24	NA	25647617	25667026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.48	chr14	+	4402	1	NIC	ENSMUSG00000007817.16	novel	7482	24	NA	NA	5502	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGAAGGTTCTGGTG	1335	False	NA	NA	False	AATAAA	-6	NA	25662755	25667157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25662800_25667200
ES.10320.5	chr14	+	3873	24	NNC	ENSMUSG00000007817.16	novel	5397	24	NA	NA	9	-2786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	27.8674285282806	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATCGTCTTGCTGGTCTT	373	False	NA	NA	False	NA	NA	NA	25459699	25662357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661740_25661886
ES.10320.6	chr14	+	5394	23	NIC	ENSMUSG00000007817.16	novel	5397	24	NA	NA	9	115	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	25.6341069283977	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTTGTGAATATTTT	373	False	NA	NA	False	NA	NA	NA	25459699	25665258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25459981_25503078_25503184_25537168_25537249_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.7	chr14	+	7410	24	FSM	ENSMUSG00000007817.16	ENSMUST00000007961.15	5397	24	11	-2024	11	0	multi-exon	FALSE	canonical	3	6	junction_3	26.0591881194375	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	375	False	NA	NA	False	AATAAA	-16	NA	25459701	25667167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.8	chr14	+	5622	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	59	1801	-9	223	multi-exon	FALSE	canonical	3	6	junction_3	25.4924281726925	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAGTCCTTTTTTAAAAA	380	False	NA	NA	False	TTTAAA	-23	NA	25459706	25665366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ES.10320.9	chr14	+	198	1	Intergenic	novelGene_8654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGGAGTTTATAAACC	28	False	NA	NA	False	GGGGCT	-6	NA	25529844	25530042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25529800_25530000
ES.10321.1	chr14	-	2912	18	Antisense	novelGene_ENSMUSG00000007817.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGATGTCGCAGCAGC	NA	False	NA	NA	False	GGGGCT	-37	NA	25663498	25636356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_25636439_25643978_25644094_25645076_25645296_25646080_25646281_25647139_25647430_25650089_25650273_25650946_25651029_25651641_25651813_25652265_25652411_25653741_25653958_25654922_25655027_25655518_25655677_25656438_25656515_25656747_25656817_25657169_25657413_25658528_25658696_25661688_25661946_25663363
ES.10322.1	chr14	+	1483	5	NIC	ENSMUSG00000021868.8	novel	1549	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_3	185.642633842552	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGCTGTCTCTGGTTT	357	False	NA	NA	False	AATAAA	-14	NA	25694558	25700888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25694848_25695896_25695928_25696427_25696517_25698689_25698766_25699890
ES.10322.2	chr14	+	1580	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-34	3	-18	1	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	358	False	NA	NA	False	AATAAA	-15	NA	25694559	25700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ES.10322.3	chr14	+	4758	3	ISM	ENSMUSG00000021868.8	ENSMUST00000125881.2	3637	4	4	0	4	0	intron_retention	FALSE	canonical	3	475	junction_1	12.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGCTGTCTCTGGTTT	380	False	NA	NA	False	AATAAA	-14	NA	25694581	25700888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25694848_25695896_25695928_25696427
ES.10322.4	chr14	+	3035	5	NIC	ENSMUSG00000021868.8	novel	1549	6	NA	NA	4	-2	intron_retention	FALSE	canonical	3	446	junction_3	21.1009478460092	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAATGGCTGTCTCTGGT	380	False	NA	NA	False	AATAAA	-12	NA	25694581	25700886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25694848_25695896_25695928_25696427_25698094_25698689_25698766_25699890
ES.10322.5	chr14	+	6308	1	FSM	ENSMUSG00000021868.8	ENSMUST00000223872.2	1664	1	-36	-4608	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGTCTCTGGTTTT	380	False	NA	NA	False	AATAAA	-15	NA	25694581	25700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25694600_25700900
ES.10322.6	chr14	+	3277	4	ISM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	-12	5	4	-1	intron_retention	FALSE	canonical	3	443	junction_3	23.3285709425636	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGGCTGTCTCTGGTT	380	False	NA	NA	False	AATAAA	-13	NA	25694581	25700887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996
ES.10322.7	chr14	+	3582	4	FSM	ENSMUSG00000021868.8	ENSMUST00000125881.2	3637	4	55	0	15	0	multi-exon	FALSE	canonical	3	453	junction_3	19.2006944318862	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGCTGTCTCTGGTTT	431	False	NA	NA	False	AATAAA	-14	NA	25694632	25700888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25694848_25695896_25695928_25696427_25698766_25699890
ES.10322.8	chr14	+	5211	2	ISM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	39	0	15	0	intron_retention	FALSE	canonical	3	475	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	431	False	NA	NA	False	AATAAA	-18	NA	25694632	25700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25694848_25695896
ES.10323.1	chr14	+	182	1	Intergenic	novelGene_8656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACCTATGTG	NA	False	NA	NA	False	NA	NA	NA	25704671	25704853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25704700_25704900
ES.10324.1	chr14	+	177	1	Intergenic	novelGene_8657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAAAGAGAAAGAAGA	2789	False	NA	NA	False	NA	NA	NA	25754207	25754384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25754200_25754400
ES.10325.1	chr14	-	4685	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-127	-2	-127	2	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGTGAGTTTGTATATG	NA	False	NA	1	True	ATTAAA	-20	NA	25769590	25712063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
ES.10325.3	chr14	-	5706	1	NIC	ENSMUSG00000055538.8	novel	4556	4	NA	NA	2441	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGGCTCGTGAGTTTG	NA	False	NA	-5	True	ATTAAA	-14	NA	25717775	25712069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_25712100_25717800
ES.10325.4	chr14	-	4503	5	NNC	ENSMUSG00000055538.8	novel	4556	4	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.4862758938759	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGAGGCTCGTGAGT	NA	False	NA	-8	True	ATTAAA	-11	NA	25769480	25712072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_25715221_25715283_25715827_25720050_25720216_25757434_25757636_25769034
ES.10325.5	chr14	-	4666	5	NNC	ENSMUSG00000055538.8	novel	4556	4	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.511624764299	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGAGGCTCGTGAGT	NA	False	NA	-8	True	ATTAAA	-11	NA	25769480	25712072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_25715827_25720050_25720216_25722684_25722785_25757434_25757636_25769034
ES.10325.6	chr14	-	3442	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	-33	1147	-33	-1145	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGCATGCGTTTAAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	25769496	25713212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
ES.10326.1	chr14	+	178	1	Intergenic	novelGene_8658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATTGGGATTTTA	NA	False	NA	NA	False	NA	NA	NA	25811938	25812116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25811900_25812100
ES.10327.1	chr14	-	311	1	Intergenic	novelGene_8659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAGACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	25837094	25836783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_25836800_25837100
ES.10328.1	chr14	+	177	1	Intergenic	novelGene_8660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATAATTGAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	25838005	25838182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25838000_25838200
ES.10329.1	chr14	-	181	1	Intergenic	novelGene_8661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	8797	False	NA	NA	False	NA	NA	NA	25839545	25839364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_25839400_25839500
ES.1033.1	chr1	-	137	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92361049	92360912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92360900_92361000
ES.10330.1	chr14	+	2445	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	-37	-14	-37	14	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTTCCGCTTTATG	299	False	NA	40	True	NA	NA	NA	25842542	25887242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.10	chr14	+	2422	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGGTGCCAGCATGT	23	False	NA	24	True	AATAAA	-32	NA	25842627	25887226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.11	chr14	+	2744	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	25	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.348898059795	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAAATGTCTTT	27	False	NA	9	True	AATAAA	-17	NA	25842631	25887211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25842720_25869287_25869351_25869450_25869517_25870139_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.12	chr14	+	5394	12	NIC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	34	-17	intron_retention	FALSE	canonical	3	387	junction_5	25.0935439986707	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAAATGTCTTT	36	False	NA	9	True	AATAAA	-17	NA	25842640	25887211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25874456_25874633_25874729_25875094_25875209_25877084_25877613_25877774_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.13	chr14	+	1086	1	Intergenic	novelGene_8662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCTAGTTGCTTTCA	5601	False	NA	NA	False	NA	NA	NA	25848205	25849291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25848200_25849300
ES.10330.14	chr14	+	7492	12	NIC	ENSMUSG00000021866.16	novel	2733	14	NA	NA	22854	0	intron_retention	FALSE	canonical	3	396	junction_3	21.3216221298459	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	3389	False	NA	26	True	AATAAA	-34	NA	25865460	25887228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25869351_25870492_25870606_25872935_25874456_25874633_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.15	chr14	+	4852	14	ISM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	24110	0	24083	0	3prime_fragment	FALSE	canonical	3	387	junction_5	26.0831624031049	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	4618	False	NA	26	True	AATAAA	-34	NA	25866689	25887228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.16	chr14	+	2661	14	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	26455	-4	intron_retention	FALSE	canonical	0	0	junction_1	117.850371485081	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCTGGTGCCAGCAT	220	False	NA	22	True	AATAAA	-30	NA	25869061	25887224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25869107_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.17	chr14	+	2185	14	ISM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	26660	117	26633	-117	3prime_fragment	FALSE	canonical	3	387	junction_5	26.0831624031049	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCGCCAATGACAAGGC	398	False	NA	-91	True	ATTAAA	-17	NA	25869239	25887111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.19	chr14	+	1587	10	ISM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	32053	17	32026	-17	3prime_fragment	FALSE	canonical	3	387	junction_1	24.4348466006043	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAAATGTCTTT	1769	False	NA	9	True	AATAAA	-17	NA	25874632	25887211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.2	chr14	+	7149	9	NIC	ENSMUSG00000021866.16	novel	2733	14	NA	NA	-9	-18	intron_retention	FALSE	canonical	3	417	junction_2	18.533331459832	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTCTGGAAATGTCTT	327	False	NA	8	True	AATAAA	-16	NA	25842570	25887210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25842720_25869287_25870606_25872935_25875209_25877084_25877613_25877774_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.20	chr14	+	2542	1	NIC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	42070	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAATGTCTTTCTGGTGC	NA	False	NA	16	True	AATAAA	-24	NA	25884676	25887218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25884700_25887200
ES.10330.4	chr14	+	2028	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	10	356	10	-356	multi-exon	FALSE	canonical	3	387	junction_6	25.4603533329122	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGAGCGTATTTACTGTA	-15	True	NA	NA	False	TTTAAA	-22	NA	25842589	25886872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.5	chr14	+	2332	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	12	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	110.374997168743	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTTTTCTTCCGCTTT	-13	True	NA	37	True	AATAAA	-45	NA	25842591	25887239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873128_25873188_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.6	chr14	+	3775	13	NIC	ENSMUSG00000021866.16	novel	2733	14	NA	NA	13	-17	intron_retention	FALSE	canonical	3	396	junction_4	20.5472017559569	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAAATGTCTTT	-12	True	NA	9	True	AATAAA	-17	NA	25842592	25887211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25874456_25874633_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.7	chr14	+	3491	14	NIC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	0	-18	intron_retention	FALSE	canonical	3	387	junction_5	26.2080885477259	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTCTGGAAATGTCTT	2	True	NA	8	True	AATAAA	-16	NA	25842606	25887210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25842720_25869287_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.8	chr14	+	6008	11	NIC	ENSMUSG00000021866.16	novel	2733	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	396	junction_4	21.7034559460009	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGGTGCCAGCATGT	3	True	NA	24	True	AATAAA	-32	NA	25842607	25887226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25874456_25874633_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10330.9	chr14	+	2508	17	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	6	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	167.283710634807	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAAATGTCTTT	8	True	NA	9	True	AATAAA	-17	NA	25842612	25887211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25842720_25843130_25843189_25848243_25848350_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ES.10331.1	chr14	-	199	1	Intergenic	novelGene_8663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAAAACATT	NA	False	NA	NA	False	NA	NA	NA	25862248	25862049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_25862000_25862200
ES.10332.1	chr14	+	3061	1	Antisense	novelGene_ENSMUSG00000095304.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	25889117	25892178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_25889100_25892200
ES.10333.1	chr14	+	156	1	Intergenic	novelGene_8664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25899767	25899923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25899800_25899900
ES.10334.1	chr14	-	891	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	147	517	147	381	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATGCATTTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	25903377	25888446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
ES.10334.2	chr14	-	919	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183431.8	536	4	-2	-381	0	381	multi-exon	TRUE	canonical	3	49	junction_3	71.4624998785299	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATGCATTTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	25902900	25888446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902704
ES.10334.3	chr14	-	452	5	NNC	ENSMUSG00000095304.10	novel	536	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.0378715441724	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25902882	25888827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25895014_25895086_25902843
ES.10334.4	chr14	-	440	4	FSM	ENSMUSG00000095304.10	ENSMUST00000183725.2	439	4	0	-1	0	0	multi-exon	FALSE	canonical	3	8	junction_3	90.5796150724139	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25902900	25888827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25902802
ES.10334.5	chr14	-	624	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	33	898	33	0	multi-exon	FALSE	canonical	3	143	junction_3	28.7170100579198	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25903491	25888827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
ES.10334.6	chr14	-	827	6	NNC	ENSMUSG00000095304.10	novel	536	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.6761997622758	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTAGCCATGACCTCT	NA	False	NA	-14	True	AATAAA	-18	NA	25902900	25888827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_25888951_25889319_25889444_25891184_25891280_25892009_25892123_25894574_25894751_25902704
ES.10335.1	chr14	+	177	1	Intergenic	novelGene_8665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATCAATTT	NA	False	NA	NA	False	NA	NA	NA	25906613	25906790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25906600_25906800
ES.10336.1	chr14	+	216	1	Intergenic	novelGene_8666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGGGCTACCTTGC	NA	False	NA	NA	False	NA	NA	NA	25913447	25913663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25913400_25913700
ES.10337.1	chr14	-	221	1	Intergenic	novelGene_8667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	25914760	25914539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_25914500_25914800
ES.10338.1	chr14	+	651	1	Intergenic	novelGene_8668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25915181	25915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25915200_25915800
ES.10339.1	chr14	-	2056	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	75	16	46	-16	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATACTCTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	25928021	25923739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ES.10339.2	chr14	-	1508	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	-59	698	-59	172	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCACATGCATCTGAGT	NA	False	NA	-6	True	AGTAAA	-17	NA	25928155	25924421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ES.10339.3	chr14	-	1269	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	13	865	13	5	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGATCGTGATGTCT	NA	False	NA	-8	True	NA	NA	NA	25928083	25924588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ES.10339.4	chr14	-	300	2	NNC	ENSMUSG00000072676.13	novel	1108	4	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTCTTGATCGTGA	NA	False	NA	-13	True	NA	NA	NA	25928015	25924593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_25924792_25927913
ES.1034.1	chr1	-	1956	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	56	8	-37	-8	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTCAGTTCCCTGGTAG	NA	False	NA	-7	True	NA	NA	NA	92401526	92366739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.10	chr1	-	3552	9	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	0	-207	intron_retention	FALSE	canonical	1	2	junction_8	438.211974248765	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401489	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401108
ES.1034.11	chr1	-	1377	10	FSM	ENSMUSG00000026260.13	ENSMUST00000189503.7	1514	10	-70	207	33	-207	multi-exon	FALSE	canonical	2	32	junction_8	396.495325583892	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401549	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398672_92398708_92401384
ES.1034.12	chr1	-	4143	9	ISM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	78	476	-15	-207	intron_retention	FALSE	canonical	3	1166	junction_5	88.6297600978362	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401504	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538
ES.1034.13	chr1	-	4265	8	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-1	-207	intron_retention	FALSE	canonical	1	2	junction_7	466.665199220239	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401470	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401108
ES.1034.14	chr1	-	6053	9	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	2	-207	intron_retention	FALSE	canonical	0	0	junction_6	556.997980247685	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401467	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92395411_92395534_92397584_92397801_92398538
ES.1034.15	chr1	-	1473	11	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-3	-207	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	519.217189622994	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401472	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390671_92390711_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.16	chr1	-	1659	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	14	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	414.122305545858	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401455	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401142
ES.1034.18	chr1	-	3630	9	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-10	-207	intron_retention	FALSE	canonical	2	8	junction_6	423.295109822922	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401384
ES.1034.19	chr1	-	3382	9	NIC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	2	-207	intron_retention	FALSE	canonical	1	6	junction_3	436.051889114128	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401467	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390671_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.2	chr1	-	1539	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	23	458	23	-189	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGCCTGGTGCCTA	NA	False	NA	-2	True	AATAAA	-38	NA	92401559	92367189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.20	chr1	-	1453	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-10	-208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	414.296488335242	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTGTCTGCGTGGCA	NA	False	NA	-21	True	AATAAA	-19	NA	92401499	92367208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388181_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.21	chr1	-	3881	9	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	3	-209	intron_retention	FALSE	canonical	1	2	junction_8	556.56620226169	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTCTGCGTGGC	NA	False	NA	-22	True	AATAAA	-18	NA	92401476	92367209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401108
ES.1034.23	chr1	-	1377	9	NIC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-15	-209	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	413.509295542434	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTCTGCGTGGC	NA	False	NA	-22	True	AATAAA	-18	NA	92401504	92367209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92397584_92397801_92398538_92398708_92401384
ES.1034.24	chr1	-	1448	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-7	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	414.122305545858	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTCTGCGTGGC	NA	False	NA	-22	True	AATAAA	-18	NA	92401496	92367209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401392
ES.1034.25	chr1	-	4755	8	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-2	-209	intron_retention	FALSE	canonical	1	2	junction_7	468.362627693978	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTCTGCGTGGC	NA	False	NA	-22	True	AATAAA	-18	NA	92401491	92367209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401108
ES.1034.26	chr1	-	1824	7	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-1395	-210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	577.789008972037	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCTGTGTCTGCGTGG	NA	False	NA	-23	True	AATAAA	-17	NA	92392106	92367210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92376071_92376447_92379732_92379842_92388101_92388188_92389464_92390068_92390671_92390880_92392082
ES.1034.27	chr1	-	1653	10	NNC	ENSMUSG00000026260.13	novel	1514	10	NA	NA	0	-215	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	511.55089774885	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTCCTCCTGTGTCTG	NA	False	NA	-28	True	AATAAA	-12	NA	92401489	92367215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398672_92398708_92401384
ES.1034.28	chr1	-	1342	10	NNC	ENSMUSG00000026260.13	novel	675	6	NA	NA	2	2606	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	411.765845003093	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCATAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	92401487	92377168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92377484_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.29	chr1	-	3646	9	ISM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	37	10440	37	2603	5prime_fragment	FALSE	canonical	3	1166	junction_4	92.3186567005825	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTCATAGTGT	NA	False	NA	NA	False	NA	NA	NA	92401545	92377171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.30	chr1	-	3405	10	NNC	ENSMUSG00000026260.13	novel	675	6	NA	NA	1	2603	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	412.687398509924	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTCATAGTGT	NA	False	NA	NA	False	NA	NA	NA	92401468	92377171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92377484_92377647_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.31	chr1	-	2158	9	ISM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	107	11858	4	1185	5prime_fragment	FALSE	canonical	3	1166	junction_4	92.3186567005825	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTAGTTATTCTGAGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	92401475	92378589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.32	chr1	-	4581	8	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-1	1168	intron_retention	FALSE	canonical	1	2	junction_7	583.076429337509	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAACAAAACCC	NA	False	NA	NA	False	NA	NA	NA	92401470	92378606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401108
ES.1034.33	chr1	-	1731	1	FSM	ENSMUSG00000026260.13	ENSMUST00000189582.2	989	1	-10	-732	-10	732	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92401499	92399768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_92399800_92401500
ES.1034.4	chr1	-	3290	9	NIC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-13	-206	intron_retention	FALSE	canonical	3	1166	junction_4	87.1040146893356	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTCTGCGTGGCACA	NA	False	NA	-19	True	AATAAA	-21	NA	92401502	92367206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.5	chr1	-	1842	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	46	-207	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	399.927771256539	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401536	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401384
ES.1034.7	chr1	-	1621	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-10	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	414.296488335242	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401499	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388348_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.1034.8	chr1	-	2050	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	1	-207	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	529.831000309428	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401468	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401108
ES.1034.9	chr1	-	1496	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	-22	-207	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	412.380203330331	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401511	92367207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92367653_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ES.10340.1	chr14	+	173	1	Intergenic	novelGene_8669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAATTGATTCA	NA	False	NA	NA	False	NA	NA	NA	25930193	25930366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_25930200_25930400
ES.10341.1	chr14	-	176	1	Intergenic	novelGene_8670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTATTTCT	NA	False	NA	NA	False	NA	NA	NA	25935762	25935586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_25935600_25935800
ES.10342.1	chr14	+	4567	5	NNC	ENSMUSG00000095975.4	novel	570	3	NA	NA	-1717	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.69966214673719	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTATGTAGACTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	25937010	25956798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25937059_25937551_25940466_25952339_25952543_25955303_25955421_25955513
ES.10342.2	chr14	+	1638	4	NNC	ENSMUSG00000095975.4	novel	570	3	NA	NA	-1706	14	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.94392028877595	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCTGTATGTAGACT	NA	False	NA	NA	False	AATAAA	-20	NA	25937021	25956794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25937059_25952339_25952543_25955303_25955421_25955513
ES.10342.3	chr14	+	1787	5	NNC	ENSMUSG00000095975.4	novel	570	3	NA	NA	3	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.69966214673719	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCTGTATGTAGACT	NA	False	NA	NA	False	AATAAA	-20	NA	25938730	25956794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_25938819_25940367_25940466_25952339_25952543_25955303_25955421_25955513
ES.10343.1	chr14	-	2020	4	Antisense	novelGene_ENSMUSG00000095975.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTTTCCCTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	25959827	25955097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_25956023_25956990_25957056_25958559_25959304_25959541
ES.10344.1	chr14	+	177	1	Intergenic	novelGene_8671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAATATCTCA	NA	False	NA	NA	False	NA	NA	NA	26003650	26003827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26003600_26003800
ES.10345.1	chr14	-	176	1	Intergenic	novelGene_8672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	26013787	26013611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26013600_26013800
ES.10346.1	chr14	-	4712	1	NIC	ENSMUSG00000114753.2	novel	5711	2	NA	NA	5056	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTGTCTTGGCTTC	1657	False	NA	NA	False	NA	NA	NA	26041053	26036341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26036300_26041100
ES.10347.1	chr14	-	176	1	Intergenic	novelGene_8673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGAGCGACTGGGGC	1577	False	NA	NA	False	NA	NA	NA	26065786	26065610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26065600_26065800
ES.10348.1	chr14	-	5555	25	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	61.4828340993556	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256102	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.10	chr14	-	5438	24	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.4058748156112	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGTTGTACATCAT	NA	False	NA	0	True	AATAAA	-22	NA	26256051	26134323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163788_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.11	chr14	-	5423	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	54.2318256108985	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGTTGTACATCAT	NA	False	NA	0	True	AATAAA	-22	NA	26256085	26134323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.12	chr14	-	5229	25	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	70.220078147208	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGTTGTACATCAT	NA	False	NA	0	True	AATAAA	-22	NA	26256096	26134323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149496_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26254764_26255043_26255780_26256002
ES.10348.17	chr14	-	5413	24	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	73.409872985831	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGAGTTGTACATCA	NA	False	NA	-1	True	AATAAA	-21	NA	26256052	26134324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.18	chr14	-	5435	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	49.6311394187157	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGAGTTGTACATCA	NA	False	NA	-1	True	AATAAA	-21	NA	26256098	26134324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.19	chr14	-	5361	22	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	55.7781481770322	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTGAGTTGTACATC	NA	False	NA	-2	True	AATAAA	-20	NA	26256052	26134325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149496_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.20	chr14	-	5498	24	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.8851964538886	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	False	NA	-3	True	AATAAA	-19	NA	26256071	26134326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137483_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181101_26181196_26181381_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.21	chr14	-	5419	22	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	56.014008613897	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	False	NA	-3	True	AATAAA	-19	NA	26256100	26134326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191591_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.22	chr14	-	5357	23	NIC	ENSMUSG00000021870.18	novel	4508	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	75.9585576438813	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256051	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.23	chr14	-	5479	24	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	63.4664968253461	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256083	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.24	chr14	-	5242	21	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	56.59558286651	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256083	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.25	chr14	-	5372	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	60.0496351170093	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256078	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.26	chr14	-	3769	17	NNC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	-1955	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.7176272746454	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26186804	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26141959_26142077_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722
ES.10348.27	chr14	-	5475	22	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.0560134507524	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256079	26134328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26255888
ES.10348.28	chr14	-	4140	21	NNC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	-14543	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	57.4293261322123	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26209652	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26209498
ES.10348.29	chr14	-	4363	1	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	12564	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26138692	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26134300_26138700
ES.10348.3	chr14	-	5364	24	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	73.3779093483881	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256034	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.30	chr14	-	5224	25	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	58.4169490007443	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256069	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26254892_26255119_26255780_26256002
ES.10348.31	chr14	-	5339	22	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	56.0995228374095	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256069	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183543_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.32	chr14	-	5086	23	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	54.8551247445834	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256085	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26254764_26255043_26255780_26256002
ES.10348.33	chr14	-	5395	23	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.4119337306287	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256052	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143564_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.36	chr14	-	9100	6	NNC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	-4076	0	intron_retention	FALSE	canonical	0	0	junction_5	110.25787953702	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26155332	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26154871_26154952
ES.10348.37	chr14	-	5152	21	NIC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	312	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	68.3213729370246	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26255738	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ES.10348.39	chr14	-	5534	24	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	59.4897967455277	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256037	26134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26255888
ES.10348.4	chr14	-	5491	24	FSM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	-15	0	-15	0	multi-exon	FALSE	canonical	3	93	junction_11	42.4199902941944	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256101	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.40	chr14	-	5258	21	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	57.2179167743811	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCATGTTTGAGTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	26256051	26134330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26203973_26204122_26254482_26255780_26256002
ES.10348.41	chr14	-	5352	23	NNC	ENSMUSG00000021870.18	novel	4501	23	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	85.3795730113667	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCATGTTTGAGTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	26256034	26134330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137444_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186816_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255771_26255999
ES.10348.43	chr14	-	5288	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	19	-3	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	60.0399316157984	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCATGTTTGAGTT	NA	False	NA	-9	True	AATAAA	-13	NA	26256031	26134332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.44	chr14	-	5179	23	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	54.8551247445834	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGATGTGCATGATTT	NA	False	NA	-47	True	ATTAAA	-15	NA	26256050	26134370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255245_26255355_26255780_26256002
ES.10348.47	chr14	-	4469	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-13	246	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTTTTTCTGTCA	NA	False	NA	NA	False	TTTAAA	-38	NA	26256063	26135204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.48	chr14	-	4507	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	245	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	49.6311394187157	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGATTTTTTTTTCTGTC	NA	False	NA	NA	False	TTTAAA	-37	NA	26256051	26135205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.49	chr14	-	3882	24	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	15	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	63.4664968253461	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAAGTTGTGAATTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	26256035	26135877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.5	chr14	-	5225	21	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	57.3247546876565	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256078	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.50	chr14	-	4255	22	ISM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	19	4236	-17	-2674	5prime_fragment	FALSE	canonical	3	93	junction_9	43.6711583087421	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATTGCCTTTGTGGGC	NA	False	NA	NA	False	AATAAA	-21	NA	26256067	26138558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.51	chr14	-	1863	2	ISM	ENSMUSG00000021870.18	ENSMUST00000136635.8	886	8	16181	-1641	3458	1641	3prime_fragment	FALSE	canonical	3	230	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATGTCTGAATTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	26147798	26141963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26143748_26147719
ES.10348.52	chr14	-	4640	19	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	17	1358	combination_of_known_junctions	FALSE	canonical	3	90	junction_8	34.1011567089577	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGTAAATATCTTAATA	NA	False	NA	NA	False	ATTAAA	-15	NA	26256069	26142246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.53	chr14	-	3302	18	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	3	833	combination_of_known_junctions	FALSE	canonical	3	90	junction_7	34.861862844215	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTATCACCCTATCC	NA	False	NA	NA	False	AATAAA	-16	NA	26256083	26147570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.54	chr14	-	6800	1	Genic_Genomic	ENSMUSG00000021870.18	novel	NA	NA	NA	NA	1655	-2493	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTTGTTAAAAAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	26158721	26151921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_26151900_26158700
ES.10348.55	chr14	-	3419	1	Genic_Genomic	ENSMUSG00000021870.18	novel	NA	NA	NA	NA	732	2089	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	26159644	26156225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_26156200_26159600
ES.10348.56	chr14	-	3546	12	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	16	1269	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	38.7769634262662	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTTGATTCAGCAGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	26256034	26162509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.57	chr14	-	3884	2	ISM	ENSMUSG00000021870.18	ENSMUST00000112331.9	3796	19	5063	51540	5063	-4913	intron_retention	FALSE	canonical	3	227	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCAAGCAAGCAAGCAT	NA	False	NA	NA	False	NA	NA	NA	26190046	26185867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26186428_26186722
ES.10348.58	chr14	-	2803	1	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-3831	-4923	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGAAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	26188680	26185877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26185900_26188700
ES.10348.59	chr14	-	5968	1	Intergenic	novelGene_8674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGTGTGAACTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	26243246	26237278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26237300_26243200
ES.10348.6	chr14	-	5346	22	NNC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	55.8827733182731	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256101	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256045
ES.10348.60	chr14	-	2969	1	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	17	-72146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAAGATCCCCAAGT	NA	False	NA	NA	False	AGTAAA	-23	NA	26256069	26253100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26253100_26256100
ES.10348.61	chr14	-	2728	2	ISM	ENSMUSG00000021870.18	ENSMUST00000102956.8	5476	24	35	118778	-1	-72146	5prime_fragment	FALSE	canonical	3	219	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAAGATCCCCAAGT	NA	False	NA	NA	False	AGTAAA	-23	NA	26256051	26253100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26255780_26256002
ES.10348.7	chr14	-	5444	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256156	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.8	chr14	-	5436	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	61.0146304091645	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTTGTACATCATT	NA	False	NA	1	True	AATAAA	-23	NA	26256085	26134322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10348.9	chr14	-	6552	21	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	90	junction_10	32.9336833652114	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGTTGTACATCAT	NA	False	NA	0	True	AATAAA	-22	NA	26256051	26134323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ES.10349.1	chr14	+	4123	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	-72	2587	-55	1152	multi-exon	TRUE	canonical	3	24	junction_11	139.009495679959	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCTTGTGTTATGTGTC	NA	False	NA	24	True	ATTAAA	-24	NA	26300660	26352890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.10	chr14	+	4382	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	34	2222	34	1517	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTGTGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	26300766	26353255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.11	chr14	+	235	1	Intergenic	novelGene_8676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATTTTAGCTCATTAA	NA	False	NA	NA	False	NA	NA	NA	26323842	26324077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26323800_26324100
ES.10349.12	chr14	+	158	1	Intergenic	novelGene_8677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	6083	False	NA	NA	False	NA	NA	NA	26337153	26337311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26337200_26337300
ES.10349.13	chr14	+	357	1	ISM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	54381	7	29288	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGTTTTGATATTA	NA	False	NA	NA	False	ATTAAA	-6	NA	26355113	26355470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_26355100_26355500
ES.10349.14	chr14	+	1871	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	-128	422	-128	22	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGATTGTGTGTTC	1558	False	NA	0	True	AATAAA	-10	NA	26359100	26377991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.10349.15	chr14	+	998	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	-48	-692	at_least_one_novel_splicesite	FALSE	non_canonical	3	73	junction_4	702.002450138174	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTTGTTGCCAA	1638	False	NA	27	True	ATTAAA	-40	NA	26359180	26377264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374301_26375025_26375118_26377050
ES.10349.17	chr14	+	997	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	19	1149	19	-692	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTTGTTGCCAA	1705	False	NA	27	True	ATTAAA	-40	NA	26359247	26377264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.10349.18	chr14	+	3413	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	24	-1272	24	1272	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTAAGCAGTTTCTG	1710	False	NA	NA	False	AATAAA	-25	NA	26359252	26379685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.10349.19	chr14	+	1618	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	58	21	at_least_one_novel_splicesite	FALSE	non_canonical	3	73	junction_4	702.002450138174	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATGATTGTGTGTT	1744	False	NA	-1	True	AATAAA	-9	NA	26359286	26377990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374301_26375025_26375118_26377050
ES.10349.2	chr14	+	3964	18	NNC	ENSMUSG00000040818.11	novel	6638	20	NA	NA	0	1142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.257592404568	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTAGGTAGCTTGT	NA	False	NA	14	True	ATTAAA	-14	NA	26300732	26352880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26301018_26320765_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.20	chr14	+	1673	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	60	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	707.057847704132	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACATGATTGTGTG	1746	False	NA	-3	True	AATAAA	-7	NA	26359288	26377988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374267_26374333_26374991_26375118_26377050
ES.10349.24	chr14	+	3091	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	90	-1016	-62	1016	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTCTTTTCTTGTTTG	1776	False	NA	NA	False	GATAAA	-17	NA	26359318	26379429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.10349.25	chr14	+	3004	6	NNC	ENSMUSG00000021877.13	novel	2165	6	NA	NA	-47	1010	at_least_one_novel_splicesite	FALSE	non_canonical	3	73	junction_4	702.002450138174	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTATTTCTTTTCT	1791	False	NA	NA	False	TATAAA	-43	NA	26359333	26379423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374301_26375025_26375118_26377050
ES.10349.26	chr14	+	221	1	Intergenic	novelGene_8679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTCCTTTCTCCCCCC	7532	False	NA	NA	False	NA	NA	NA	26365074	26365295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26365100_26365300
ES.10349.27	chr14	+	1391	5	ISM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	8523	423	-6414	21	3prime_fragment	FALSE	canonical	3	1593	junction_3	113.420401603944	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATGATTGTGTGTT	NA	False	NA	-1	True	AATAAA	-9	NA	26367751	26377990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.10349.28	chr14	+	1139	3	ISM	ENSMUSG00000021877.13	ENSMUST00000112318.10	1367	5	14758	-21	-26	21	3prime_fragment	FALSE	canonical	3	1593	junction_1	135	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATGATTGTGTGTT	NA	False	NA	-1	True	AATAAA	-9	NA	26374259	26377990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_26374333_26374991_26375118_26377050
ES.10349.5	chr14	+	3186	20	NNC	ENSMUSG00000040818.11	novel	6638	20	NA	NA	12	305	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	140.814724739997	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATTGATTGAAAATTTA	NA	False	NA	NA	False	AATGAA	-14	NA	26300744	26352043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26301012_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.6	chr14	+	3433	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	16	3189	16	550	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGAAGTTTATTTTGC	NA	False	NA	NA	False	AATATA	-16	NA	26300748	26352288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.7	chr14	+	2843	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	18	3777	18	-38	multi-exon	FALSE	canonical	3	24	junction_11	139.009495679959	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTTGTACTACCTTG	NA	False	NA	NA	False	NA	NA	NA	26300750	26351700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ES.10349.8	chr14	+	2973	23	Fusion	ENSMUSG00000021877.13_ENSMUSG00000040818.11	novel	6638	20	NA	NA	30	21	multi-exon	FALSE	canonical	0	0	junction_13	636.929826045056	776	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATGATTGTGTGTT	NA	False	NA	-1	True	AATAAA	-9	NA	26300762	26377990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321602_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ES.1035.1	chr1	-	431	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	4	3	4	-3	multi-exon	FALSE	canonical	3	610	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGTGCTTTTAGAT	NA	False	NA	-22	True	AATAAA	-27	NA	92569703	92564869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_92565126_92567408_92567482_92569601
ES.1035.2	chr1	-	4800	1	NIC	ENSMUSG00000073616.11	novel	438	3	NA	NA	29	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGATTTTAATTCCTGTG	NA	False	NA	-31	True	AATAAA	-18	NA	92569678	92564878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92564900_92569700
ES.1035.3	chr1	-	462	4	NNC	ENSMUSG00000073616.11	novel	649	3	NA	NA	21	-20	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	277.022662530623	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGCAGGGTGATTTTAA	NA	False	NA	-39	True	AATAAA	-10	NA	92569686	92564886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92565126_92567408_92567482_92569328_92569394_92569601
ES.10350.1	chr14	-	149	1	Intergenic	novelGene_8675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	26316426	26316277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26316300_26316400
ES.10351.1	chr14	-	3487	1	Antisense	novelGene_ENSMUSG00000040818.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACTTTTCTAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	26329770	26326283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_26326300_26329800
ES.10351.2	chr14	-	3164	2	Antisense	novelGene_ENSMUSG00000040818.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACTTTTCTAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	26329770	26326283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_26329366_26329688
ES.10352.1	chr14	-	139	1	ISM	ENSMUSG00000090861.2	ENSMUST00000166902.2	566	2	9638	0	9638	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAATCTTTATTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	26349700	26349561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26349600_26349700
ES.10353.1	chr14	-	3350	1	NIC	ENSMUSG00000090861.2	novel	566	2	NA	NA	112	-6315	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTACCAACTGAGCTAT	NA	False	NA	NA	False	NA	NA	NA	26359226	26355876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26355900_26359200
ES.10353.2	chr14	-	158	1	Intergenic	novelGene_8678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	26356375	26356217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26356200_26356400
ES.10354.1	chr14	-	178	1	Intergenic	novelGene_8680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACCTTGTTATTAATA	NA	False	NA	NA	False	NA	NA	NA	26380392	26380214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26380200_26380400
ES.10355.1	chr14	-	7500	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	225	0	225	0	multi-exon	FALSE	canonical	3	278	junction_2	18	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGGGTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	26390813	26381112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.10	chr14	-	2679	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	-10	5056	-10	-5056	multi-exon	FALSE	canonical	3	278	junction_2	18	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTCTTCGTTTTTCAG	NA	False	NA	-2	True	ATTAAA	-21	NA	26391048	26386168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.11	chr14	-	4218	2	ISM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	237	5061	237	-5061	intron_retention	FALSE	canonical	3	314	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATAGCTTCTTCGTTT	NA	False	NA	-7	True	ATTAAA	-16	NA	26390801	26386173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26387123_26387532
ES.10355.12	chr14	-	2294	4	NNC	ENSMUSG00000043702.10	novel	7725	3	NA	NA	235	-5063	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	140.307598590462	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTATAGCTTCTTCGT	NA	False	NA	-9	True	ATTAAA	-14	NA	26390803	26386175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26387123_26387532_26387612_26389402_26389661_26389793
ES.10355.13	chr14	-	2348	2	NIC	ENSMUSG00000043702.10	novel	7725	3	NA	NA	235	-5063	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTATAGCTTCTTCGT	NA	False	NA	-9	True	ATTAAA	-14	NA	26390803	26386175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26387123_26389402
ES.10355.2	chr14	-	4095	1	ISM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	5198	633	5198	-633	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTATCATACATAAAGC	NA	False	NA	NA	False	NA	NA	NA	26385840	26381745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26381700_26385800
ES.10355.3	chr14	-	5867	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	43	1815	43	-1815	multi-exon	FALSE	canonical	3	278	junction_2	18	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTGTTAAATAAGAGGT	NA	False	NA	NA	False	AATAAA	-15	NA	26390995	26382927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.4	chr14	-	4845	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	237	2643	237	-2643	multi-exon	FALSE	canonical	3	278	junction_2	18	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGGATTGGTTAGTT	NA	False	NA	NA	False	AATACA	-14	NA	26390801	26383755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.5	chr14	-	4610	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	235	2880	235	-2880	multi-exon	FALSE	canonical	3	278	junction_2	18	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTTGTATTTAATACAT	NA	False	NA	NA	False	NA	NA	NA	26390803	26383992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.6	chr14	-	3775	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	236	3714	236	-3714	multi-exon	FALSE	canonical	3	278	junction_2	18	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCATGTCCTAAATCCTT	NA	False	NA	NA	False	NA	NA	NA	26390802	26384826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.7	chr14	-	3621	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	-43	4147	-43	-4147	multi-exon	FALSE	canonical	3	278	junction_2	18	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCCTTCATAAATATGG	NA	False	NA	NA	False	AATAAA	-30	NA	26391081	26385259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10355.8	chr14	-	3141	4	NNC	ENSMUSG00000043702.10	novel	7725	3	NA	NA	236	-4162	intron_retention	FALSE	canonical	0	0	junction_3	140.307598590462	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGTTACCAAATTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	26390802	26385274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26387123_26387532_26387612_26389402_26389661_26389846
ES.10355.9	chr14	-	3240	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	236	4249	236	-4249	multi-exon	FALSE	canonical	3	278	junction_2	18	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTGAACCTTTATTCA	NA	False	NA	NA	False	AATATA	-18	NA	26390802	26385361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26387123_26387532_26387612_26389402
ES.10356.1	chr14	+	5568	33	ISM	ENSMUSG00000021879.14	ENSMUST00000022433.12	12009	74	13488	90039	13488	27892	internal_fragment	FALSE	canonical	0	0	junction_2	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTACAGAAAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	26427916	26523621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_26428077_26428281_26428478_26430290_26430480_26431269_26431427_26432132_26432225_26437707_26437887_26439063_26439200_26443242_26443369_26444651_26444787_26445009_26445204_26445545_26445790_26455627_26455814_26456770_26456972_26460311_26460507_26488028_26488151_26488246_26488530_26491902_26492023_26492317_26492475_26492853_26493027_26494489_26494643_26494882_26495123_26495552_26495799_26496174_26496295_26500758_26500869_26503302_26503487_26503622_26503764_26507216_26507301_26507814_26508004_26514095_26514216_26518127_26518317_26520744_26520897_26521902_26522042_26523365
ES.10357.1	chr14	-	178	1	Intergenic	novelGene_8681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2990	False	NA	NA	False	NA	NA	NA	26439885	26439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26439700_26439900
ES.10358.1	chr14	+	178	1	Intergenic	novelGene_8682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATTTAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	26579502	26579680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26579500_26579700
ES.10359.1	chr14	+	1636	8	NIC	ENSMUSG00000021879.14	novel	12009	74	NA	NA	93842	-11821	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.728431359084683	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTTCTGTTTTTGG	7254	False	NA	NA	False	ATTAAA	-14	NA	26586827	26601839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_26587142_26590730_26590876_26593675_26593827_26594178_26594433_26597166_26597305_26598725_26598960_26599857_26600047_26601628
ES.1036.1	chr1	-	180	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTCTTCAGTCTG	NA	False	NA	NA	False	NA	NA	NA	92588501	92588321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92588300_92588500
ES.10360.1	chr14	+	3635	1	Intergenic	novelGene_8685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGAGA	1120	False	NA	NA	False	NA	NA	NA	26657613	26661248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26657600_26661200
ES.10360.2	chr14	+	2875	1	Intergenic	novelGene_8684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACAGGGCTTAGACCCA	1120	False	NA	NA	False	AATAAA	-26	NA	26657613	26660488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26657600_26660500
ES.10360.3	chr14	+	3624	2	Intergenic	novelGene_8686	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	118	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	1120	False	NA	NA	False	NA	NA	NA	26657613	26734943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26661202_26734907
ES.10360.4	chr14	+	199	1	Intergenic	novelGene_8687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAGTACAAATC	NA	False	NA	NA	False	NA	NA	NA	26686428	26686627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26686400_26686600
ES.10360.5	chr14	+	175	1	Intergenic	novelGene_8689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAATCTAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	26708071	26708246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26708100_26708200
ES.10360.6	chr14	+	828	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	312	1	312	-1	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGTATTTTAATATACTT	NA	False	NA	NA	False	AATAAA	-17	NA	26722630	26724285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
ES.10360.7	chr14	+	183	1	Intergenic	novelGene_8693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26733155	26733338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26733200_26733300
ES.10360.8	chr14	+	138	1	Intergenic	novelGene_8694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAAACAAATAC	NA	False	NA	NA	False	NA	NA	NA	26733404	26733542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26733400_26733500
ES.10361.1	chr14	-	8234	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	665	-1257	-62	1257	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTGATTTGGAAACAC	NA	False	NA	NA	False	NA	NA	NA	26692524	26639687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.11	chr14	-	6791	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-63	2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692525	26640942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.12	chr14	-	7088	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	99.6590468539345	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTATGAAATATTTA	NA	False	NA	-11	True	AATAAA	-21	NA	26692526	26640943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26676961_26677070_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.14	chr14	-	2570	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3590852886179	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTATGAAATATTTA	NA	False	NA	-11	True	AATAAA	-21	NA	26692479	26640943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26641343_26645705_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.16	chr14	-	6847	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	78.0284563476685	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	-12	True	AATAAA	-20	NA	26692482	26640944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.17	chr14	-	6927	22	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	76.3516747117738	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	-12	True	AATAAA	-20	NA	26692526	26640944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671536_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.18	chr14	-	6931	21	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	103.897593812369	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	-12	True	AATAAA	-20	NA	26692536	26640944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682991_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.2	chr14	-	8024	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	0	1181	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTCTTATGTTGGTA	NA	False	NA	NA	False	AATAAA	-22	NA	26692462	26639763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10361.20	chr14	-	6984	22	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.8418811060565	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTGTATGAAATATT	NA	False	NA	-13	True	AATAAA	-19	NA	26692504	26640945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645853_26647369_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.22	chr14	-	6136	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3590852886179	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTTTGTATGAAATAT	NA	False	NA	-14	True	AATAAA	-18	NA	26692482	26640946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26641664_26642460_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.24	chr14	-	9139	18	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-54	-6	intron_retention	FALSE	canonical	2	8	junction_8	82.7132035919472	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTATTTTTGTATGAA	NA	False	NA	-18	True	AATAAA	-14	NA	26692516	26640950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.25	chr14	-	6823	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	676	143	-51	-143	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGTTTGTGATCATGG	NA	False	NA	NA	False	ATTAAA	-21	NA	26692513	26641087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.26	chr14	-	4382	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	664	2596	-63	-2596	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCAGCTCTCTGCTTGAA	NA	False	NA	NA	False	ATTAAA	-27	NA	26692525	26643540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.27	chr14	-	4301	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	-2606	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCTGTAGTCAGCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	26692526	26643550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10361.29	chr14	-	3962	22	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	1	-2942	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	76.5491557277439	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGGTTTTCAGTTTCA	NA	False	NA	NA	False	ACTAAA	-22	NA	26692456	26643886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682991_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.3	chr14	-	8115	21	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-67	1181	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.1748391120258	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTCTTATGTTGGTA	NA	False	NA	NA	False	AATAAA	-22	NA	26692529	26639763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645853_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10361.31	chr14	-	3901	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	694	3047	-33	-3047	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTTCTTGTTTTGTTG	NA	False	NA	NA	False	TTTAAA	-18	NA	26692495	26643991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.32	chr14	-	3134	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	662	3846	-65	-3846	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAATTTCAGACTGA	NA	False	NA	NA	False	AATAAA	-27	NA	26692527	26644790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.33	chr14	-	3320	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-65	-3846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	97.3426681436374	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAATTTCAGACTGA	NA	False	NA	NA	False	AATAAA	-27	NA	26692527	26644790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26689309_26689496_26692357
ES.10361.34	chr14	-	2921	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-44	-3849	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTTGAATTTCAGAC	NA	False	NA	NA	False	AATAAA	-24	NA	26692506	26644793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.36	chr14	-	3221	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-34	-3853	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	97.5312198374203	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATCTTTTGAATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	26692496	26644797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26672913_26673039_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.37	chr14	-	3151	22	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-65	-3853	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.645970977773	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATCTTTTGAATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	26692527	26644797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645853_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.39	chr14	-	3321	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-74	-3855	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	99.7694967379251	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACAATCTTTTGAATT	NA	False	NA	NA	False	AATAAA	-18	NA	26692536	26644799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680551_26680815_26680921_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.4	chr14	-	7900	1	Genic_Genomic	ENSMUSG00000040760.12	novel	NA	NA	NA	NA	32788	1164	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAACTAAAATCT	NA	False	NA	NA	False	AATAAA	-5	NA	26647680	26639780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_26639800_26647700
ES.10361.40	chr14	-	3116	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-1	-3856	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	97.0854292801572	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACAATCTTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	26692463	26644800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684066_26684123_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.41	chr14	-	2438	7	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	28730	-3856	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	127.158365827813	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAACAATCTTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	26651738	26644800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26651254_26651391
ES.10361.42	chr14	-	2506	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	661	4475	-66	-4475	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTGAACATTTTATC	NA	False	NA	80	True	NA	NA	NA	26692528	26645419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.44	chr14	-	2240	21	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-14	-4558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	115.684257788171	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGCTTTCCTAAACAA	NA	False	NA	-3	True	AATAAA	-20	NA	26692476	26645502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665898_26667501_26667559_26669077_26669121_26671394_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10361.45	chr14	-	2957	21	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-74	-4558	intron_retention	FALSE	canonical	0	0	junction_14	78.8578467877484	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGCTTTCCTAAACAA	NA	False	NA	-3	True	AATAAA	-20	NA	26692536	26645502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675044_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.46	chr14	-	3938	13	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	5388	-4560	intron_retention	FALSE	canonical	3	262	junction_4	27.2931615366682	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCTGCTTTCCTAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	26675080	26645504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26647464_26647915_26647967_26649685_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934
ES.10361.47	chr14	-	2329	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	-4562	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	78.0284563476685	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAACTCTGCTTTCCTAA	NA	False	NA	-7	True	AATAAA	-16	NA	26692526	26645506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.48	chr14	-	3055	20	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-52	-4562	intron_retention	FALSE	canonical	0	0	junction_9	80.0657624443149	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAACTCTGCTTTCCTAA	NA	False	NA	-7	True	AATAAA	-16	NA	26692514	26645506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671394_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.49	chr14	-	2355	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-74	-4562	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAACTCTGCTTTCCTAA	NA	False	NA	-7	True	AATAAA	-16	NA	26692536	26645506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10361.50	chr14	-	2362	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	-4564	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	77.6938060594279	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCAACTCTGCTTTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	26692526	26645508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.51	chr14	-	2437	22	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-62	-4564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.645970977773	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCAACTCTGCTTTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	26692524	26645508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645853_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.52	chr14	-	2176	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-14	-4564	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCAACTCTGCTTTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	26692476	26645508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.53	chr14	-	2506	17	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-42	-8813	intron_retention	FALSE	canonical	3	262	junction_1	31.7824022652474	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGCGGAAGAAGTGAGAG	NA	False	NA	NA	False	AATAAA	-28	NA	26692504	26649757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.54	chr14	-	4663	2	Intergenic	novelGene_8683	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26659082	26654212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26655030_26655236
ES.10361.55	chr14	-	3589	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	735	19190	3	12948	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTAACTGTATGATATT	NA	False	NA	NA	False	TATAAA	-18	NA	26692454	26660134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.56	chr14	-	3471	16	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-11	12814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	86.9633383801601	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAAAAATGGGTATTA	NA	False	NA	NA	False	TATAAA	-8	NA	26692473	26660268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671401_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.57	chr14	-	3201	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	663	19650	-64	12488	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAACCATAAGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	26692526	26660594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.58	chr14	-	1743	16	NNC	ENSMUSG00000040760.12	novel	1226	8	NA	NA	-11	12472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.912411088717	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	26692473	26660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26661001_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.59	chr14	-	3209	17	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	2	12472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.205824027521	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	26692460	26660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26678673_26678764_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.6	chr14	-	7022	23	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-11	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	117.533896992097	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTAGTTACTTTGAT	NA	False	NA	0	True	AATAAA	-32	NA	26692473	26640932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675044_26680446_26680469_26681381_26681424_26682289_26682449_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.60	chr14	-	1704	16	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	618	21192	-109	10946	5prime_fragment	FALSE	canonical	3	283	junction_1	27.6115917686757	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTCTGCTGCTGTCC	NA	False	NA	NA	False	AGTAAA	-20	NA	26692571	26662136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.61	chr14	-	4124	1	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	8268	5006	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGAATATTGTTTTCT	NA	False	NA	NA	False	AAAAAG	-5	NA	26672200	26668076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26668100_26672200
ES.10361.62	chr14	-	1344	12	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	692	27970	-35	4168	5prime_fragment	FALSE	canonical	3	309	junction_7	26.6690770260519	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATTAGTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	26692497	26668914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.63	chr14	-	1107	10	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	650	31448	-77	690	5prime_fragment	FALSE	canonical	3	309	junction_5	27.4671520992702	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCACTTTATGTATGTA	NA	False	NA	NA	False	ACTAAA	-18	NA	26692539	26672392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.7	chr14	-	7003	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	642	-3	-85	3	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTATGAAATATTTAGT	NA	False	NA	-9	True	AATAAA	-23	NA	26692547	26640941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ES.10361.8	chr14	-	5531	7	NNC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-64	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	153.866464471271	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692526	26640942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_26645853_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650643_26692357
ES.10361.9	chr14	-	6924	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-79	2	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATGAAATATTTAG	NA	False	NA	-10	True	AATAAA	-22	NA	26692541	26640942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
ES.10362.1	chr14	-	250	1	Intergenic	novelGene_8688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGGGTCACACATCC	NA	False	NA	NA	False	NA	NA	NA	26707573	26707323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26707300_26707600
ES.10363.1	chr14	-	366	1	Intergenic	novelGene_8690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	26717397	26717031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26717000_26717400
ES.10363.2	chr14	-	159	2	Antisense	novelGene_ENSMUSG00000040726.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	26717398	26717031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_26717067_26717274
ES.10363.3	chr14	-	243	1	Intergenic	novelGene_8691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGGTCCGAAGGTCCGA	NA	False	NA	NA	False	NA	NA	NA	26717396	26717153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26717200_26717400
ES.10364.1	chr14	-	311	1	Intergenic	novelGene_8692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	26720094	26719783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26719800_26720100
ES.10365.1	chr14	+	171	1	Intergenic	novelGene_8695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGCCCAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	26735097	26735268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26735100_26735300
ES.10366.1	chr14	-	169	1	Intergenic	novelGene_8696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26759095	26758926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26758900_26759100
ES.10367.1	chr14	+	3420	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	-1	4861	-1	-84	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCTGTTTCCAAAGG	NA	False	NA	NA	False	AGTAAA	-30	NA	26760896	26824382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
ES.10367.10	chr14	+	10062	2	NIC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	6065	0	intron_retention	FALSE	canonical	3	23	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTGGCTCCTTATT	NA	False	NA	5	True	AATAAA	-15	NA	26815786	26829243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_26818045_26821439
ES.10367.11	chr14	+	3433	2	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	15654	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGCAGTGGCTCCTT	NA	False	NA	2	True	AATAAA	-12	NA	26825375	26829240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26826722_26827153
ES.10367.12	chr14	+	4023	13	NIC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-360	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	15.3622914957372	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26836495	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.13	chr14	+	3853	14	FSM	ENSMUSG00000021895.11	ENSMUST00000225949.2	3198	14	-59	-596	-59	0	multi-exon	FALSE	canonical	0	0	junction_1	19.9769097479296	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26836796	27125861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26836881_26865949_26866088_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.14	chr14	+	3845	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-58	6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	17.0588955433745	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGTGTACAGTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	26836797	27125874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26836881_26837154_26837273_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.15	chr14	+	4108	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	13.9363633069112	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26836802	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26837273_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.16	chr14	+	1752	6	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	-12	-15206	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	16.0124951209985	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	26836843	27086398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27085860_27086020
ES.10367.17	chr14	+	3703	12	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	282	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3454887217743	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTCCTCCTGTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	26837137	27125865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26837273_26874918_26875013_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.18	chr14	+	3917	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	286	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.27444831402	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	26837141	27125873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26837273_26840404_26840548_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.2	chr14	+	2379	12	ISM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	44	6708	44	-398	5prime_fragment	FALSE	canonical	2	9	junction_1	4.66036567926411	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAATGGTTGTTCTGGT	NA	False	NA	NA	False	AATAGA	-40	NA	26760941	26822535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439
ES.10367.20	chr14	+	1415	11	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	15996	-8939	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.3410402745508	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTGTGTGTTTGTGT	NA	False	NA	NA	False	TATAAA	-32	NA	26852851	27116326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26852950_26860617_26860758_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889
ES.10367.21	chr14	+	3697	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	16032	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.1664644001029	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTCCTCCTGTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	26852887	27125865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26852950_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.22	chr14	+	3783	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	26177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26863032	27125861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26863185_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.23	chr14	+	3941	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	26796	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	26863651	27125873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26863950_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.24	chr14	+	3954	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	26909	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.5139155324677	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26863764	27125861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26863950_26865949_26866088_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.25	chr14	+	3938	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	26931	137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAAGCTGTTACAGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	26863786	27126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26863950_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.26	chr14	+	3816	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	30221	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTCCTCCTGTGTAC	NA	False	NA	NA	False	AATAAA	-13	NA	26867076	27125866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26867257_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.27	chr14	+	3945	13	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	30273	179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3773479628573	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGATTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	26867128	27126047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26867257_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.28	chr14	+	3817	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	34772	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	23.0111884286624	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	26871627	27125861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26871746_26874918_26875013_26930845_26930913_26958607_26958676_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.29	chr14	+	4641	1	Intergenic	novelGene_8700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCCTCAAAGAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	26883776	26888417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_26883800_26888400
ES.10367.3	chr14	+	7569	14	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	6.40451024507651	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTGGCTCCTTATT	NA	False	NA	5	True	AATAAA	-15	NA	26760948	26829243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233_26824460_26825119
ES.10367.31	chr14	+	3476	12	NNC	ENSMUSG00000021895.11	novel	3585	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.0142703529677	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26959975	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26960111_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586_27125499_27125634
ES.10367.32	chr14	+	177	1	Intergenic	novelGene_8705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	27013211	27013388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27013200_27013400
ES.10367.33	chr14	+	158	1	Intergenic	novelGene_8707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	9235	False	NA	NA	False	NA	NA	NA	27048306	27048464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27048300_27048500
ES.10367.34	chr14	+	3674	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-56	0	-56	0	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	27057966	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.35	chr14	+	2723	7	ISM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	-43	8019	-43	-7416	5prime_fragment	FALSE	canonical	3	20	junction_1	15.4775823549919	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACCAAGTACTCAGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	27057979	27117849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889
ES.10367.36	chr14	+	3475	9	NIC	ENSMUSG00000021895.11	novel	3618	10	NA	NA	-28	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	20.6155281280883	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	27057994	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27058227_27084746_27084855_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10367.37	chr14	+	7466	1	Intergenic	novelGene_8708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTCTCTGTGTAGCC	NA	False	NA	NA	False	NA	NA	NA	27060982	27068448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27061000_27068400
ES.10367.38	chr14	+	159	1	Intergenic	novelGene_8709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	9400	False	NA	NA	False	NA	NA	NA	27076794	27076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27076800_27077000
ES.10367.39	chr14	+	5760	1	Intergenic	novelGene_8710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTATTGCTATAACTAT	NA	False	NA	NA	False	NA	NA	NA	27086564	27092324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27086600_27092300
ES.10367.4	chr14	+	3582	14	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	51	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.0333104311769	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGCAGTGGCTCCTT	NA	False	NA	2	True	AATAAA	-12	NA	26760948	26829240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233_26823645_26828267
ES.10367.5	chr14	+	8218	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	62	0	62	0	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTGGCTCCTTATT	NA	False	NA	5	True	AATAAA	-15	NA	26760959	26829243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
ES.10367.6	chr14	+	7805	14	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	7.0333104311769	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTGGCTCCTTATT	NA	False	NA	5	True	AATAAA	-15	NA	26760964	26829243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233_26826823_26827209
ES.10367.7	chr14	+	8171	13	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	5.67646212197547	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGCAGTGGCTCCTT	NA	False	NA	2	True	AATAAA	-12	NA	26760982	26829240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233
ES.10367.8	chr14	+	3292	13	NNC	ENSMUSG00000040717.7	novel	8280	13	NA	NA	-44	-96	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	5.67646212197547	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTGTACAGAAATTC	NA	False	NA	NA	False	AGTAAA	-18	NA	26760991	26824370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817880_26818045_26821439_26822383_26823233
ES.10367.9	chr14	+	5810	24	Fusion	ENSMUSG00000040717.7_ENSMUSG00000021895.11	novel	8280	13	NA	NA	-40	0	multi-exon	FALSE	canonical	0	0	junction_12	18.4384737896058	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26760995	27125868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ES.10368.1	chr14	+	7590	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-60	0	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8868	False	NA	16	True	AATAAA	-20	NA	27150730	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.10	chr14	+	6516	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-17	1091	-17	-1091	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTTGTCATTGTGTG	8911	False	NA	NA	False	TATAAA	-44	NA	27150773	27204421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.11	chr14	+	7195	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_1	85.0934127232472	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8911	False	NA	16	True	AATAAA	-20	NA	27150773	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27150817_27150954_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.12	chr14	+	4588	17	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	2947	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_15	72.6918797046823	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTATTTTGCTTT	8912	False	NA	NA	False	AATAAA	-26	NA	27150774	27191120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188157_27188269_27189462
ES.10368.13	chr14	+	11658	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	0	intron_retention	FALSE	canonical	3	136	junction_16	47.2684657170049	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8912	False	NA	16	True	AATAAA	-20	NA	27150774	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.14	chr14	+	5439	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	-2107	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	44.9305478737062	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTATTGATGATTTAT	8912	False	NA	NA	False	ATTAAA	-19	NA	27150774	27203405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.15	chr14	+	7332	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	0	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8912	False	NA	16	True	AATAAA	-20	NA	27150774	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.16	chr14	+	6544	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-16	-1002	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	44.9305478737062	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTATGAGATTCGTT	8912	False	NA	NA	False	ACTAAA	-21	NA	27150774	27204510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.17	chr14	+	4628	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-15	14385	-15	2954	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGCTTTATTTAAT	8913	False	NA	NA	False	AATAAA	-33	NA	27150775	27191127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
ES.10368.18	chr14	+	4990	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-11	14019	-11	3320	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGTTTCCCAGTGTA	8917	False	NA	NA	False	AATAAA	-19	NA	27150779	27191493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
ES.10368.19	chr14	+	8090	22	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-10	0	intron_retention	FALSE	canonical	3	154	junction_16	43.6998627519029	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8918	False	NA	16	True	AATAAA	-20	NA	27150780	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.2	chr14	+	7637	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-47	0	-47	0	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8881	False	NA	16	True	AATAAA	-20	NA	27150743	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.20	chr14	+	4448	15	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-10	-4565	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	97.3032551839236	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTGGAGATCCAGATC	8918	False	NA	NA	False	NA	NA	NA	27150780	27183608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172127_27178977_27180995_27181735_27181809_27181897_27181970_27183040
ES.10368.21	chr14	+	5137	17	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-10	2943	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	70.1239694665811	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAGAAATTTATTTTG	8918	False	NA	NA	False	AATAAA	-22	NA	27150780	27191116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27188937
ES.10368.23	chr14	+	6232	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5	-1089	combination_of_known_junctions	FALSE	canonical	3	82	junction_23	68.3154033064469	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTCATTGTGTGCT	8923	False	NA	NA	False	AATACA	-20	NA	27150785	27204423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.24	chr14	+	6157	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	3	-1096	combination_of_known_splicesites	FALSE	canonical	3	82	junction_22	59.3898035047312	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTAAAGTTTGTCATT	8931	False	NA	NA	False	TATAAA	-39	NA	27150793	27204416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.25	chr14	+	7042	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	4	1094	4	-1094	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAAGTTTGTCATTGT	8932	False	NA	NA	False	TATAAA	-41	NA	27150794	27204418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.26	chr14	+	5672	24	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_22	89.3121794965682	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8937	False	NA	16	True	AATAAA	-20	NA	27150799	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27204254_27204318_27204510
ES.10368.27	chr14	+	5179	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	15	-2062	combination_of_known_splicesites	FALSE	canonical	3	82	junction_22	59.3898035047312	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCCTTTCCTGTTT	8943	False	NA	NA	False	TATAAA	-23	NA	27150805	27203450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.28	chr14	+	7430	23	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	16	0	intron_retention	FALSE	canonical	1	9	junction_20	70.2901454362882	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8944	False	NA	16	True	AATAAA	-20	NA	27150806	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201669_27201765_27201880_27202049_27202598
ES.10368.29	chr14	+	7142	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	18	0	intron_retention	FALSE	canonical	1	2	junction_14	84.8468800578758	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8946	False	NA	16	True	AATAAA	-20	NA	27150808	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183233_27183388_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.3	chr14	+	7341	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-33	-222	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGTTTTAAATGTAC	8895	False	NA	NA	False	ATTAAA	-44	NA	27150757	27205290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.30	chr14	+	12536	22	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_15	80.0792124843198	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8946	False	NA	16	True	AATAAA	-20	NA	27150808	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186338_27188098_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.31	chr14	+	6147	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	22	1421	22	-1421	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTACTGTTACTA	8950	False	NA	NA	False	GATAAA	-15	NA	27150812	27204091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.32	chr14	+	7332	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	30	-3	intron_retention	FALSE	canonical	0	0	junction_18	94.7893772617305	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8958	False	NA	13	True	AATAAA	-17	NA	27150820	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27192312_27192362_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.33	chr14	+	4657	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	33	-2840	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	44.9305478737062	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTTTAGCATCGGATT	8961	False	NA	NA	False	ATTAAA	-18	NA	27150823	27202672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.34	chr14	+	7311	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	33	246	33	-246	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGCACTTTAT	8961	False	NA	NA	False	ATTAAA	-20	NA	27150823	27205266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.35	chr14	+	5493	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	33	2064	33	-2064	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTTCCTTTCCTGT	8961	False	NA	NA	False	TATAAA	-21	NA	27150823	27203448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.36	chr14	+	6131	22	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	33	-1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.6300838795778	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGTCATTGTGTGC	8961	False	NA	NA	False	TATAAA	-45	NA	27150823	27204422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168494_27170108_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.37	chr14	+	11335	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	33	0	intron_retention	FALSE	canonical	3	82	junction_22	61.0979433179706	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8961	False	NA	16	True	AATAAA	-20	NA	27150823	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.38	chr14	+	6368	23	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	33	-1096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	72.3857321222631	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTAAAGTTTGTCATT	8961	False	NA	NA	False	TATAAA	-39	NA	27150823	27204416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199101_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.39	chr14	+	4436	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	33	14529	33	2810	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGACCTCTGTTAAAT	8961	False	NA	NA	False	AGTAAA	-16	NA	27150823	27190983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
ES.10368.4	chr14	+	7288	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-32	0	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8896	False	NA	16	True	AATAAA	-20	NA	27150758	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.40	chr14	+	5727	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-1769	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	44.9305478737062	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGGTATAAGCCAGCAG	8962	False	NA	NA	False	ATTAAA	-20	NA	27150824	27203743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.41	chr14	+	7857	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	34	249	34	-249	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGTTTTAGCACTT	8962	False	NA	NA	False	ATTAAA	-17	NA	27150824	27205263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.42	chr14	+	5798	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-1424	combination_of_known_splicesites	FALSE	canonical	3	82	junction_22	59.3898035047312	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCTTGCCTACTGTTA	8962	False	NA	NA	False	GATAAA	-12	NA	27150824	27204088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.43	chr14	+	4998	24	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	103.079300322662	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8962	False	NA	16	True	AATAAA	-20	NA	27150824	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598_27202800_27204510_27204588_27205342
ES.10368.44	chr14	+	7269	1	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-7677	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTGTCATTGTTT	8962	False	NA	NA	False	ATTAAA	-43	NA	27150824	27158093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27150800_27158100
ES.10368.45	chr14	+	1514	2	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-7701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAGGTTATTAGGA	8962	False	NA	NA	False	ATTAAA	-19	NA	27150824	27158069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27152283_27158013
ES.10368.46	chr14	+	7037	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-245	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTAGCACTTTATT	8962	False	NA	NA	False	ATTAAA	-21	NA	27150824	27205267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.47	chr14	+	4884	2	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-7680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTGTTGTCATTG	8962	False	NA	NA	False	ATTAAA	-40	NA	27150824	27158090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27155155_27157536
ES.10368.48	chr14	+	6991	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	0	intron_retention	FALSE	canonical	1	3	junction_18	84.7240516651296	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8962	False	NA	16	True	AATAAA	-20	NA	27150824	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27193740_27194030_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.49	chr14	+	6976	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-246	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGCACTTTAT	8962	False	NA	NA	False	ATTAAA	-20	NA	27150824	27205266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.5	chr14	+	10022	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-31	-3	intron_retention	FALSE	canonical	0	0	junction_23	88.7724052313305	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8897	False	NA	13	True	AATAAA	-17	NA	27150759	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598_27202800_27204254_27204318_27204510
ES.10368.50	chr14	+	5707	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	0	intron_retention	FALSE	canonical	0	0	junction_23	93.1306952024352	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8962	False	NA	16	True	AATAAA	-20	NA	27150824	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27204254_27204318_27204510
ES.10368.51	chr14	+	7867	21	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	0	intron_retention	FALSE	canonical	2	8	junction_20	69.1650923515613	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8962	False	NA	16	True	AATAAA	-20	NA	27150824	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201880
ES.10368.52	chr14	+	5366	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	34	-1856	combination_of_known_splicesites	FALSE	canonical	3	82	junction_22	59.3898035047312	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACGTTCTTTAATGTC	8962	False	NA	NA	False	TATAAA	-15	NA	27150824	27203656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.53	chr14	+	7788	22	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	46	-246	intron_retention	FALSE	canonical	3	154	junction_16	43.6998627519029	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGCACTTTAT	8974	False	NA	NA	False	ATTAAA	-20	NA	27150836	27205266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.54	chr14	+	5688	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	49	1853	49	-1853	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTTCTTTAATGTCAGA	8977	False	NA	NA	False	TATAAA	-18	NA	27150839	27203659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.55	chr14	+	6380	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	50	-886	combination_of_known_junctions	FALSE	canonical	3	82	junction_23	68.3154033064469	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATACAAAATATCAT	8978	False	NA	NA	False	NA	NA	NA	27150840	27204626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.58	chr14	+	6856	23	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	51	-251	intron_retention	FALSE	non_canonical	0	0	junction_13	90.6680554605189	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTGGTTTTAGCAC	8979	False	NA	NA	False	ATTAAA	-15	NA	27150841	27205261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183379_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199101_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.59	chr14	+	8077	23	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	52	-3	intron_retention	FALSE	canonical	0	0	junction_9	80.7399790368813	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8980	False	NA	13	True	AATAAA	-17	NA	27150842	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170210_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.6	chr14	+	7320	25	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-27	-6	intron_retention	FALSE	canonical	1	3	junction_18	77.4762956580197	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACTGTCTCGGGACTT	8901	False	NA	10	True	AATAAA	-14	NA	27150763	27205506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27193740_27194030_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.61	chr14	+	7166	23	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	53	-3	intron_retention	FALSE	canonical	2	10	junction_15	80.002066089023	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	8981	False	NA	13	True	AATAAA	-17	NA	27150843	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188157_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.63	chr14	+	7106	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	59	-246	intron_retention	FALSE	canonical	2	8	junction_21	74.7330372693639	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGCACTTTAT	8987	False	NA	NA	False	ATTAAA	-20	NA	27150849	27205266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201880_27202049_27202598
ES.10368.64	chr14	+	4999	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	96	3045	96	-3045	5prime_fragment	FALSE	canonical	3	108	junction_17	57.5939763838414	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTGGTGAAAAGCAGAG	9024	False	NA	NA	False	AATAAA	-16	NA	27150886	27202467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.65	chr14	+	5452	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	96	-1768	combination_of_known_junctions	FALSE	canonical	3	82	junction_23	68.3154033064469	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGTATAAGCCAGCAGT	9024	False	NA	NA	False	ATTAAA	-21	NA	27150886	27203744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.66	chr14	+	4552	17	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	132	2942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	70.3509061775326	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAGAAATTTATTTT	9060	False	NA	NA	False	AATAAA	-21	NA	27150922	27191115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189379
ES.10368.67	chr14	+	5638	16	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	157	14397	157	2942	intron_retention	FALSE	canonical	3	228	junction_8	25.2398274338175	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAGAAATTTATTTT	9085	False	NA	NA	False	AATAAA	-21	NA	27150947	27191115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123
ES.10368.68	chr14	+	5586	17	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	208	13204	208	4135	5prime_fragment	FALSE	canonical	3	136	junction_16	41.1035278291292	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAGAATGCACAGCTA	9136	False	NA	NA	False	AATAAA	-16	NA	27150998	27192308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462
ES.10368.69	chr14	+	11208	22	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	333	-1295	intron_retention	FALSE	canonical	3	213	junction_21	36.8575119951984	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTGTGTTAATAGTAC	9261	False	NA	NA	False	AATGAA	-19	NA	27151123	27204217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.7	chr14	+	5030	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-26	-2526	combination_of_known_splicesites	FALSE	canonical	3	154	junction_16	44.9305478737062	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGGATCAAGTGGAACA	8902	False	NA	NA	False	NA	NA	NA	27150764	27202986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.70	chr14	+	7078	23	NNC	ENSMUSG00000040651.10	novel	3038	4	NA	NA	1629	0	intron_retention	FALSE	canonical	2	6	junction_1	72.2144419062746	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27152419	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27152519_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.71	chr14	+	2196	2	Intergenic	novelGene_8712	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTTTTTGTTGTCAT	NA	False	NA	NA	False	ATTAAA	-38	NA	27153453	27158088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27155091_27157529
ES.10368.72	chr14	+	4763	24	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	894	-1767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	79.5398391458152	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTATAAGCCAGCAGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	27160581	27203745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27193740_27194222_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.73	chr14	+	11978	21	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	901	0	intron_retention	FALSE	canonical	3	82	junction_20	56.1746161535617	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27160588	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.74	chr14	+	6895	22	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	11315	0	2418	0	3prime_fragment	FALSE	canonical	3	108	junction_15	59.7742920191829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27162105	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.75	chr14	+	4782	19	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	13623	1855	4726	-1855	3prime_fragment	FALSE	canonical	3	108	junction_12	62.3019578393591	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACGTTCTTTAATGTCA	NA	False	NA	NA	False	TATAAA	-16	NA	27164413	27203657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.76	chr14	+	4906	18	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	8652	-1295	combination_of_known_junctions	FALSE	canonical	3	82	junction_17	76.5790181496292	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTGTGTTAATAGTAC	NA	False	NA	NA	False	AATGAA	-19	NA	27168339	27204217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.77	chr14	+	5985	15	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	10421	0	intron_retention	FALSE	canonical	3	82	junction_14	70.459171851216	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27170108	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.78	chr14	+	6108	14	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	21110	0	12213	0	3prime_fragment	FALSE	canonical	3	108	junction_7	72.403618857545	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27171900	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.79	chr14	+	5771	13	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	12213	-3	intron_retention	FALSE	canonical	3	82	junction_12	76.0601005053825	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	NA	False	NA	13	True	AATAAA	-17	NA	27171900	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.8	chr14	+	8165	23	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	-25	0	-25	0	intron_retention	FALSE	canonical	3	108	junction_17	57.5939763838414	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8903	False	NA	16	True	AATAAA	-20	NA	27150765	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.81	chr14	+	4565	8	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	250	0	intron_retention	FALSE	canonical	2	8	junction_6	120.722146827721	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27186079	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201880_27202049_27202872
ES.10368.82	chr14	+	3657	8	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	305	-1856	intron_retention	FALSE	canonical	3	154	junction_2	62.6646402914526	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACGTTCTTTAATGTC	NA	False	NA	NA	False	TATAAA	-15	NA	27186134	27203656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880
ES.10368.83	chr14	+	9605	7	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	2719	-3	intron_retention	FALSE	canonical	3	213	junction_6	46.9411570183589	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	NA	False	NA	13	True	AATAAA	-17	NA	27188548	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.84	chr14	+	7029	7	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	39242	1095	4203	-1095	3prime_fragment	FALSE	canonical	3	213	junction_6	46.9411570183589	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAAAGTTTGTCATTG	NA	False	NA	NA	False	TATAAA	-40	NA	27190032	27204417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.85	chr14	+	5208	8	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	5405	-3	intron_retention	FALSE	canonical	0	0	junction_7	116.588409127396	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	NA	False	NA	13	True	AATAAA	-17	NA	27191234	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598_27202800_27204510
ES.10368.86	chr14	+	5261	6	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-6410	0	intron_retention	FALSE	canonical	2	8	junction_4	119.242609833901	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27192716	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201880_27202049_27202598
ES.10368.87	chr14	+	3098	8	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5917	0	intron_retention	FALSE	canonical	0	0	junction_6	149.374751301987	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27193209	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27204254_27204318_27204510
ES.10368.88	chr14	+	4325	7	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5554	0	intron_retention	FALSE	canonical	0	0	junction_1	140.768624187194	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27193572	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27194519_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ES.10368.89	chr14	+	2496	7	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5381	-3	intron_retention	FALSE	canonical	1	8	junction_6	120.878727105586	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCGGGACTTTGA	NA	False	NA	13	True	AATAAA	-17	NA	27193745	27205509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27204510
ES.10368.9	chr14	+	7259	24	NNC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-20	0	intron_retention	FALSE	canonical	1	3	junction_17	71.1079745553804	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8908	False	NA	16	True	AATAAA	-20	NA	27150770	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27193740_27194030_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ES.10368.91	chr14	+	4435	3	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	-5	1297	intron_retention	FALSE	canonical	2	8	junction_1	102.5	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTCACCTATCTGATT	NA	False	NA	NA	False	NA	NA	NA	27199121	27206809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27199178_27201880_27202049_27202598
ES.10368.93	chr14	+	130	1	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	46	-6210	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTATACTCTCTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	27199172	27199302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27199200_27199300
ES.10368.94	chr14	+	4953	2	ISM	ENSMUSG00000040651.10	ENSMUST00000225139.2	3038	4	1317	0	1317	0	intron_retention	FALSE	canonical	3	367	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27200443	27205512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27201765_27201880
ES.10369.1	chr14	+	2582	1	Antisense	novelGene_ENSMUSG00000046753.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGCTGGGGAGATATGA	NA	False	NA	NA	False	NA	NA	NA	27221563	27224145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_27221600_27224100
ES.1037.1	chr1	-	177	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCAAGCAAGCAAACA	NA	False	NA	NA	False	NA	NA	NA	92677770	92677593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_92677600_92677800
ES.10370.1	chr14	-	153	1	Intergenic	novelGene_8697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATCCTAGATATGGAAGA	NA	False	NA	NA	False	NA	NA	NA	26787196	26787043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26787000_26787200
ES.10371.1	chr14	-	177	1	Intergenic	novelGene_8698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATTCCA	NA	False	NA	NA	False	NA	NA	NA	26819452	26819275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26819300_26819500
ES.10372.1	chr14	-	155	1	Intergenic	novelGene_8699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	26820517	26820362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26820400_26820500
ES.10373.1	chr14	-	5159	1	Intergenic	novelGene_8701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAATCGGCTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	26901736	26896577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26896600_26901700
ES.10374.1	chr14	-	176	1	Intergenic	novelGene_8702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	26929437	26929261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26929300_26929400
ES.10375.1	chr14	-	189	1	Intergenic	novelGene_8703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACAAATAAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26940619	26940430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26940400_26940600
ES.10376.1	chr14	-	157	1	Intergenic	novelGene_8704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	26998654	26998497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_26998500_26998700
ES.10377.1	chr14	-	171	1	Intergenic	novelGene_8706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	27028618	27028447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27028400_27028600
ES.10378.1	chr14	-	5683	5	Antisense	novelGene_ENSMUSG00000021895.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTGCCTCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	27126375	27109569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27110824_27112226_27112257_27119606_27119670_27120487_27120623_27122174
ES.10378.2	chr14	-	842	6	Antisense	novelGene_ENSMUSG00000021895.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.4	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATATAGGTTCATGGA	NA	False	NA	NA	False	ATTAAA	-24	NA	27150609	27113778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27114015_27119606_27119670_27122174_27122345_27125651_27125768_27140915_27141062_27150498
ES.10378.3	chr14	-	178	1	Intergenic	novelGene_8711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27132539	27132361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27132400_27132500
ES.10378.4	chr14	-	4914	1	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTTTACATGATTCA	NA	False	NA	NA	False	AATAAA	-20	NA	27151287	27146373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27146400_27151300
ES.10378.5	chr14	-	4838	2	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAATGTTTTTACATGA	NA	False	NA	NA	False	AATAAA	-16	NA	27151267	27146377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27147227_27147278
ES.10378.6	chr14	-	936	2	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTTATGGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	27151273	27146774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27146936_27150498
ES.10378.7	chr14	-	4433	2	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTTATGGAGT	NA	False	NA	NA	False	NA	NA	NA	27151262	27146777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27147227_27147278
ES.10378.8	chr14	-	4514	1	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATGGAG	NA	False	NA	NA	False	NA	NA	NA	27151292	27146778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27146800_27151300
ES.10378.9	chr14	-	3318	1	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTCTGTTTGTGCCT	NA	False	NA	NA	False	GATAAA	-15	NA	27151282	27147964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27148000_27151300
ES.10379.1	chr14	-	274	1	Intergenic	novelGene_8713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	27178326	27178052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27178100_27178300
ES.10379.2	chr14	-	147	1	Intergenic	novelGene_8714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	27178326	27178179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27178200_27178300
ES.1038.1	chr1	+	3903	10	NNC	ENSMUSG00000034220.8	novel	4176	9	NA	NA	-336	-569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.6969761969749	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAACTGGTAAGACTCG	6847	False	NA	19	True	ATTAAA	-30	NA	92759030	92787932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785617_92785656_92785753_92786053
ES.1038.2	chr1	+	3920	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-299	555	-299	-555	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGTGTGTACATGTGA	6884	False	NA	33	True	ATTAAA	-44	NA	92759067	92787946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ES.1038.3	chr1	+	4182	8	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-289	584	-289	-584	intron_retention	FALSE	canonical	3	30	junction_7	7.45872998983235	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACATGACCTCATTTA	6894	False	NA	4	True	ATTAAA	-15	NA	92759077	92787917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576
ES.1038.4	chr1	+	4224	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	-67	19	-67	-19	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCCCTGCTCAGCCA	7116	False	NA	NA	False	NA	NA	NA	92759299	92788482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ES.1038.5	chr1	+	3489	10	NNC	ENSMUSG00000034220.8	novel	4176	9	NA	NA	28	-584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	15.6969761969749	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACATGACCTCATTTA	7211	False	NA	4	True	ATTAAA	-15	NA	92759394	92787917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053_92786810_92786884
ES.10380.1	chr14	-	3076	17	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	1	9628	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5336143233435	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTATCTGCTCTACTTA	7542	False	NA	NA	False	AATAAA	-15	NA	27230401	27193418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27193788_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
ES.10380.10	chr14	-	2986	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-35	1311	-35	6	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7491	False	NA	NA	False	AATAAA	-26	NA	27230452	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.11	chr14	-	3491	5	ISM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	19114	-11	-5456	6	3prime_fragment	FALSE	canonical	3	90	junction_4	4.03112887414927	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	NA	False	NA	NA	False	AATAAA	-26	NA	27211288	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419
ES.10380.12	chr14	-	2811	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	24.9846828076724	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	AATAAA	-26	NA	27230402	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.13	chr14	-	2522	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_14	24.638559084289	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7513	False	NA	NA	False	AATAAA	-26	NA	27230430	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27227594_27227621_27228607_27228673_27230378
ES.10380.15	chr14	-	3035	19	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3637067127824	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	AATAAA	-26	NA	27230402	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291_27209391_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.16	chr14	-	2632	6	NNC	ENSMUSG00000046753.11	novel	2457	16	NA	NA	-4981	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.7680280643728	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	NA	False	NA	NA	False	AATAAA	-26	NA	27210813	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291
ES.10380.17	chr14	-	4221	14	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	6542	6	intron_retention	FALSE	canonical	3	78	junction_8	10.9587715806204	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	NA	False	NA	NA	False	AATAAA	-26	NA	27223860	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220847_27222197
ES.10380.19	chr14	-	2972	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-47	6	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	19.957767911267	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7479	False	NA	NA	False	AATAAA	-26	NA	27230464	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
ES.10380.2	chr14	-	3130	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	9627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8995212638627	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTATCTGCTCTACTT	7513	False	NA	NA	False	AATAAA	-14	NA	27230430	27193419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27193788_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.20	chr14	-	3500	13	NNC	ENSMUSG00000046753.11	novel	2457	16	NA	NA	9944	6	intron_retention	FALSE	canonical	0	0	junction_5	41.0710766030467	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	NA	False	NA	NA	False	AATAAA	-26	NA	27220458	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291_27209391_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216421_27219295_27219409_27220397
ES.10380.21	chr14	-	2631	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-23	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.9606542880118	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7503	False	NA	NA	False	AATAAA	-26	NA	27230440	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27209291_27209391_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27227594_27227621_27228607_27228673_27230378
ES.10380.22	chr14	-	2953	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_16	23.975766311887	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7545	False	NA	NA	False	AATAAA	-26	NA	27230398	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227642_27228607_27228673_27230378
ES.10380.23	chr14	-	2996	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	24.6001941084417	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7513	False	NA	NA	False	AATAAA	-26	NA	27230430	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228575_27228673_27230378
ES.10380.24	chr14	-	6398	15	NNC	ENSMUSG00000046753.11	novel	2457	16	NA	NA	0	6	intron_retention	TRUE	non_canonical	0	0	junction_13	26.9515816808966	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	AATAAA	-26	NA	27230402	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27224067_27228084_27228673_27230378
ES.10380.25	chr14	-	3825	17	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-23	6	intron_retention	FALSE	canonical	2	3	junction_9	25.0280311600813	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7503	False	NA	NA	False	AATAAA	-26	NA	27230440	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.26	chr14	-	2985	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	24.8093073281744	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7513	False	NA	NA	False	AATAAA	-26	NA	27230430	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222661_27227594_27227621_27228607_27228673_27230378
ES.10380.27	chr14	-	2999	17	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	32.9407019316529	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTGTCA	7513	False	NA	NA	False	AATAAA	-16	NA	27230430	27204367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219448_27220397_27220502_27220680_27220847_27222197_27222640_27228575_27228673_27230378
ES.10380.28	chr14	-	3911	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	74	junction_15	11.6737887487311	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7542	False	NA	NA	False	AATAAA	-15	NA	27230401	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27228673_27230378
ES.10380.3	chr14	-	3111	1	Antisense	novelGene_ENSMUSG00000040651.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	ATTAAA	-25	NA	27196638	27193527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27193500_27196600
ES.10380.30	chr14	-	3177	18	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.4933672978335	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7513	False	NA	NA	False	AATAAA	-15	NA	27230430	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27204897_27205148_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
ES.10380.31	chr14	-	3855	10	NIC	ENSMUSG00000046753.11	novel	2457	16	NA	NA	10991	0	intron_retention	FALSE	canonical	3	78	junction_6	12.838983845026	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	27219411	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295
ES.10380.32	chr14	-	2833	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	24.3114167151765	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7504	False	NA	NA	False	AATAAA	-15	NA	27230439	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.33	chr14	-	2987	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	24.7169443022421	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7503	False	NA	NA	False	AATAAA	-15	NA	27230440	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213931_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.34	chr14	-	4679	13	NIC	ENSMUSG00000046753.11	novel	2457	16	NA	NA	7943	0	intron_retention	FALSE	canonical	3	88	junction_11	10.2153887183341	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	27222459	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197
ES.10380.35	chr14	-	3933	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	0	intron_retention	FALSE	canonical	3	74	junction_14	12.6229887011753	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7513	False	NA	NA	False	AATAAA	-15	NA	27230430	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.36	chr14	-	2981	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	24.8158616537765	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7637	False	NA	NA	False	AATAAA	-15	NA	27230306	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230226
ES.10380.37	chr14	-	2770	17	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	29.0277345826367	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7541	False	NA	NA	False	AATAAA	-15	NA	27230402	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
ES.10380.38	chr14	-	3079	19	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1891464528753	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7546	False	NA	NA	False	AATAAA	-15	NA	27230397	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27204897_27205036_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222661_27227594_27227621_27228607_27228673_27230378
ES.10380.39	chr14	-	2923	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.9245227418708	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7537	False	NA	NA	False	AATAAA	-15	NA	27230406	27204368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215474_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.4	chr14	-	4134	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	24.3114167151765	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGATATTCTTTTTTT	7541	False	NA	NA	False	AATAAA	-33	NA	27230402	27203030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.40	chr14	-	3005	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	24.8242263632298	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAATCTCTTG	7498	False	NA	NA	False	AATAAA	-13	NA	27230445	27204370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219448_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.41	chr14	-	2453	16	FSM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	2	2	2	-2	multi-exon	FALSE	canonical	1	3	junction_14	25.3941375561806	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAATCTCTTG	7543	False	NA	NA	False	AATAAA	-13	NA	27230400	27204370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27228607_27228673_27230378
ES.10380.42	chr14	-	2799	16	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.294474633047	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAATCTCTTG	7513	False	NA	NA	False	AATAAA	-13	NA	27230430	27204370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27206021_27206276_27207049_27207087_27208416_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
ES.10380.43	chr14	-	2923	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.2764872050472	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAATCTCTTG	7503	False	NA	NA	False	AATAAA	-13	NA	27230440	27204370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213903_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220813_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.44	chr14	-	4416	11	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-4	-6549	intron_retention	FALSE	canonical	3	74	junction_8	15.0283066245003	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAGGAGTTGGAGTTT	7522	False	NA	NA	False	TATAAA	-15	NA	27230421	27210917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.46	chr14	-	1861	11	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	-8971	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	29.9814942923131	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGATGAAATTCCTT	7526	False	NA	NA	False	ATTAAA	-19	NA	27230417	27213339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.47	chr14	-	2013	11	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-25	10295	-25	-8973	5prime_fragment	FALSE	canonical	3	74	junction_8	15.0283066245003	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTGTGATGAAATTCC	7501	False	NA	NA	False	ATTAAA	-17	NA	27230442	27213341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.5	chr14	-	4274	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	-14	2	-14	-2	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGACTGCAATTCAA	7512	False	NA	NA	False	AATAAA	-15	NA	27230431	27203048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.6	chr14	-	4414	19	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.5919262429034	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGACTGCAATTCAA	7513	False	NA	NA	False	AATAAA	-15	NA	27230430	27203048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27217492_27217634_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ES.10380.7	chr14	-	2881	18	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-27	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	31.6027461467171	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7499	False	NA	NA	False	AATAAA	-26	NA	27230444	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215351_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228575_27228673_27230378
ES.10380.8	chr14	-	3922	16	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	6	intron_retention	FALSE	canonical	1	1	junction_14	25.8984341010975	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	7541	False	NA	NA	False	AATAAA	-26	NA	27230402	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228575_27228673_27230378
ES.10380.9	chr14	-	2893	17	NNC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	1731	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.6703105503225	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTCATGTTAGGGTA	9272	False	NA	NA	False	AATAAA	-26	NA	27228671	27204357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213889_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607
ES.10381.1	chr14	-	171	1	Intergenic	novelGene_8715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGAGAGAGAGCTTA	1504	False	NA	NA	False	NA	NA	NA	27269921	27269750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27269800_27269900
ES.10382.1	chr14	+	2646	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-92	1406	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGTTTGTTTGTTTGT	2234	False	NA	NA	False	AATAAA	-25	NA	27344292	27377165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
ES.10382.10	chr14	+	3252	16	NNC	ENSMUSG00000040640.12	novel	2874	16	NA	NA	92	-14151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.41008944227766	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTAATAGCTTTGGTA	1060	False	NA	NA	False	AATAAA	-28	NA	27345647	28025081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27345707_27374643_27375441_27498782_27499200_27598543_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27757372_27757477_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832
ES.10382.11	chr14	+	5350	16	NNC	ENSMUSG00000040640.12	novel	638	2	NA	NA	14048	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.06956384885902	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTTACCTTTTACAAA	9143	False	NA	15	True	AATAAA	-23	NA	27388831	28200494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27388931_27498782_27499200_27598543_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832_28024968_28105862_28106001_28197559
ES.10382.12	chr14	+	565	1	Intergenic	novelGene_8716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAATCTGTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	27392194	27392759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27392200_27392800
ES.10382.13	chr14	+	3064	1	Genic_Genomic	ENSMUSG00000040640.12	novel	NA	NA	NA	NA	-2045	-51557	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGGTGTCTGTTTATTAC	5713	False	NA	NA	False	AATAAA	-24	NA	27444547	27447611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_27444500_27447600
ES.10382.14	chr14	+	1796	1	Intergenic	novelGene_8718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	27599199	27600995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27599200_27601000
ES.10382.15	chr14	+	4394	11	NNC	ENSMUSG00000040640.12	novel	6083	16	NA	NA	-79914	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.19530906173409	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTCATCTTACCTTTT	NA	False	NA	10	True	AATAAA	-18	NA	27688470	28200489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832_28024968_28105780_28106001_28197559
ES.10382.16	chr14	+	1189	1	Intergenic	novelGene_8719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	27736283	27737472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_27736300_27737500
ES.10382.17	chr14	+	153	1	Intergenic	novelGene_8721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	28082469	28082622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_28082500_28082600
ES.10382.2	chr14	+	2618	4	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-84	1399	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.3448241713959	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACATTCTTGTTTGTT	2242	False	NA	NA	False	AATAAA	-18	NA	27344300	27377158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27344572_27350368_27350423_27374643_27375441_27375662
ES.10382.3	chr14	+	3324	15	ISM	ENSMUSG00000040640.12	ENSMUST00000090302.6	6083	16	-95	175446	-81	-14184	5prime_fragment	FALSE	canonical	0	0	junction_2	8.52277860219546	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAGCATAGAGTGAT	2245	False	NA	NA	False	AATAAA	-16	NA	27344303	28025048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_27344572_27374643_27375441_27498782_27499200_27598543_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832
ES.10382.4	chr14	+	677	4	NNC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-69	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.4710223230453	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTGTCTGTTTAT	2257	False	NA	16	True	ATTAAA	-13	NA	27344315	27375760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27344572_27374643_27374852_27375325_27375441_27375662
ES.10382.5	chr14	+	1144	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-62	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTGTCTGTTTAT	2264	False	NA	16	True	ATTAAA	-13	NA	27344322	27375760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27344572_27374643_27375441_27375662
ES.10382.6	chr14	+	2531	3	NIC	ENSMUSG00000040640.12	novel	1356	4	NA	NA	-44	1406	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGTTTGTTTGTTTGT	2282	False	NA	NA	False	AATAAA	-25	NA	27344340	27377165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27344572_27374643_27375441_27375662
ES.10382.7	chr14	+	1154	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTGTCTGTTTAT	2321	False	NA	16	True	ATTAAA	-13	NA	27344379	27375760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
ES.10382.8	chr14	+	6101	16	FSM	ENSMUSG00000040640.12	ENSMUST00000090302.6	6083	16	-19	1	-5	1	multi-exon	FALSE	canonical	0	0	junction_2	8.37191070717365	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATCTTACCTTTTACAA	2321	False	NA	14	True	AATAAA	-22	NA	27344379	28200493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_27344572_27374643_27375441_27498782_27499200_27598543_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832_28024968_28197559
ES.10382.9	chr14	+	6137	17	NNC	ENSMUSG00000040640.12	novel	6083	16	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.38357266740185	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTTACCTTTTACAAA	2355	False	NA	15	True	AATAAA	-23	NA	27344413	28200494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_27344572_27345639_27345707_27374643_27375441_27498782_27499200_27598541_27598619_27620522_27620679_27634769_27634938_27688352_27688521_27733592_27733731_27743918_27744060_27746989_27747131_27762299_27762494_27802088_27802225_27863177_27863339_27993534_27993683_28024832_28024968_28197559
ES.10383.1	chr14	-	6987	2	Antisense	novelGene_ENSMUSG00000040640.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGTTTCTGTACAAGAC	NA	False	NA	NA	False	NA	NA	NA	27412479	27405447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27412412_27412456
ES.10384.1	chr14	-	177	1	Intergenic	novelGene_8717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAAATCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	27568741	27568564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27568600_27568700
ES.10385.1	chr14	-	4771	1	Antisense	novelGene_ENSMUSG00000040640.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	27756018	27751247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_27751200_27756000
ES.10385.2	chr14	-	232	1	Intergenic	novelGene_8720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATGTGTACATACA	NA	False	NA	NA	False	NA	NA	NA	27755335	27755103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_27755100_27755300
ES.10386.1	chr14	-	4412	5	NNC	ENSMUSG00000021991.10	novel	918	8	NA	NA	13481	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACCTTGTTTGGCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	28677889	28626901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_28627315_28629944_28630025_28630239_28630356_28665513_28665626_28674198
ES.10387.1	chr14	-	175	1	Intergenic	novelGene_8722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAGACCCACAA	NA	False	NA	NA	False	NA	NA	NA	29105509	29105334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_29105300_29105500
ES.10388.1	chr14	-	446	4	Antisense	novelGene_ENSMUSG00000114606.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATGTGCTTGCAT	NA	False	NA	NA	False	ATTAAA	-45	NA	29671805	29469339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_29469516_29477126_29477213_29671472_29671539_29671687
ES.10389.1	chr14	-	5761	1	Intergenic	novelGene_8723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29690116	29684355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_29684400_29690100
ES.1039.1	chr1	-	4194	14	NIC	ENSMUSG00000034212.15	novel	1809	3	NA	NA	13851	-33	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.0537589601968	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAATTA	NA	False	NA	NA	False	NA	NA	NA	92816777	92787557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92789125_92798530_92798692_92799394_92799471_92804256_92804423_92804732_92804847_92806052_92806185_92807036_92807145_92808701_92808843_92809472_92809614_92811463_92811636_92812556_92812988_92813857_92814017_92814344_92814562_92816168
ES.1039.3	chr1	-	6939	12	NIC	ENSMUSG00000034212.15	novel	1809	3	NA	NA	13658	-34	intron_retention	FALSE	canonical	0	0	junction_2	3.28281274277596	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTAAAATT	NA	False	NA	NA	False	NA	NA	NA	92816970	92787558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_92789125_92798530_92799471_92804256_92804423_92804732_92804847_92806052_92806185_92807036_92807145_92808701_92808843_92809472_92811636_92812556_92812988_92813857_92814017_92814344_92814562_92816168
ES.1039.4	chr1	-	1864	4	ISM	ENSMUSG00000034212.15	ENSMUST00000160548.8	3246	18	13869	14240	13869	-14240	internal_fragment	FALSE	canonical	1	2	junction_2	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTTTGTCATAGT	NA	False	NA	NA	False	NA	NA	NA	92816759	92812090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_92812988_92813857_92814017_92814344_92814562_92816168
ES.10390.1	chr14	+	864	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	-9	823	-9	-1	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGTTGGTTTT	NA	False	NA	10	True	AATAAA	-21	NA	29690255	29696796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ES.10390.2	chr14	+	1042	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	48	588	48	234	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTCTGATTTACTATT	NA	False	NA	91	True	AATATA	-17	NA	29690312	29697031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ES.10390.3	chr14	+	2213	4	NIC	ENSMUSG00000042682.11	novel	1678	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	996	junction_3	6.68331255192114	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGTTGGTTTT	NA	False	NA	10	True	AATAAA	-21	NA	29690395	29696796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_29690494_29691982_29692074_29693744_29695405_29696432
ES.10390.5	chr14	+	570	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	138	970	10	-148	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTTTTGTATAGTTT	NA	False	NA	NA	False	TATAAA	-20	NA	29690402	29696649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ES.10390.6	chr14	+	4569	1	Genic_Genomic	ENSMUSG00000042682.11	novel	NA	NA	NA	NA	5280	2622	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTCCAACCCTGTCA	NA	False	NA	NA	False	NA	NA	NA	29695672	29700241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_29695700_29700200
ES.10391.1	chr14	+	2107	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	14	-2	14	2	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGATTTGAGATAATCT	NA	False	NA	23	True	ATTAAA	-27	NA	29700307	29715178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.10	chr14	+	2180	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	59	-120	-9	120	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTGTGGCATCTTCT	NA	False	NA	NA	False	NA	NA	NA	29700352	29715296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.11	chr14	+	3456	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	59	-1396	-9	-1252	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTACTTACCGGATC	NA	False	NA	7	True	ATTAAA	-20	NA	29700352	29716572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.12	chr14	+	5670	10	NIC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	289	junction_3	21.0765799460496	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACACTGATTTGAGAT	NA	False	NA	18	True	ATTAAA	-22	NA	29700352	29715173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_29700546_29704555_29704727_29705986_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ES.10391.13	chr14	+	3881	11	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	60	6	-8	-6	intron_retention	FALSE	canonical	3	289	junction_4	20.0199900099875	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700353	29715170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ES.10391.14	chr14	+	3853	11	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	5	junction_5	96.4788059627606	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700353	29715170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708906_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ES.10391.15	chr14	+	4141	12	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-6	-1251	intron_retention	FALSE	canonical	3	17	junction_11	88.8925435428679	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTACTTACCGGATCA	NA	False	NA	8	True	ATTAAA	-21	NA	29700355	29716573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29715103_29716243
ES.10391.16	chr14	+	2607	12	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_5	126.724011957527	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACACTGATTTGAGATAA	NA	False	NA	20	True	ATTAAA	-24	NA	29700362	29715175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704592_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708906_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29713713_29714917
ES.10391.18	chr14	+	4332	10	NIC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	6	-12	intron_retention	FALSE	canonical	3	289	junction_4	20.9973543306982	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTAAAGTATGACACTG	NA	False	NA	9	True	ATTAAA	-13	NA	29700367	29715164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660
ES.10391.19	chr14	+	3124	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	77	-1082	-3	1082	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGGCTCTGTTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	29700370	29716258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.2	chr14	+	3422	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	15	-1226	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	89.4443068264752	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTTTGTTTTGTT	NA	False	NA	8	True	AATACA	-40	NA	29700308	29716598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29715206
ES.10391.20	chr14	+	2001	13	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	92.4828437543358	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700377	29715170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708906_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.21	chr14	+	1558	11	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-30	117	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	101.481032710551	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCAGCTGTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	29707922	29715293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29715206
ES.10391.3	chr14	+	2189	14	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.106188015857	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	False	NA	21	True	ATTAAA	-25	NA	29700326	29715176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29700996_29701100_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.4	chr14	+	1943	13	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	92.1244252205799	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACACTGATTTGAGATAA	NA	False	NA	20	True	ATTAAA	-24	NA	29700339	29715175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712789_29712926_29713548_29713713_29714917
ES.10391.5	chr14	+	2688	12	NIC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	289	junction_4	27.7366601098544	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700341	29715170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29713713_29714917
ES.10391.6	chr14	+	2324	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-20	-1254	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTGCTACTTACCGGA	NA	False	NA	5	True	ATTAAA	-18	NA	29700341	29716570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
ES.10391.7	chr14	+	2028	13	NNC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	-20	-11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	122.289274536513	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAAGTATGACACTGA	NA	False	NA	10	True	ATTAAA	-14	NA	29700341	29715165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704592_29704727_29705986_29706103_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ES.10391.8	chr14	+	4805	10	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	48	-3	-20	3	intron_retention	FALSE	canonical	3	289	junction_4	15.4208452795494	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGATTTGAGATAATCTA	NA	False	NA	24	True	ATTAAA	-28	NA	29700341	29715179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616
ES.10391.9	chr14	+	2102	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	116.332669275782	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGACACTGATTTGA	NA	False	NA	15	True	ATTAAA	-19	NA	29700347	29715170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29713995_29714039_29714917
ES.10392.1	chr14	-	6506	1	Genic_Genomic	ENSMUSG00000015966.18	novel	NA	NA	NA	NA	-679	1867	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATGTTCGAGCATTTGT	NA	False	NA	NA	False	NA	NA	NA	29722730	29716224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_29716200_29722700
ES.10393.1	chr14	-	924	1	ISM	ENSMUSG00000015968.19	ENSMUST00000225717.2	4918	17	41886	10	5106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTTGAAGTTGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	29762829	29761905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_29761900_29762800
ES.10394.1	chr14	+	181	1	Intergenic	novelGene_8724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTGCACTGTC	NA	False	NA	NA	False	NA	NA	NA	29765206	29765387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_29765200_29765400
ES.10395.1	chr14	+	2598	2	Antisense	novelGene_ENSMUSG00000015968.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30150150	30153793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_30150401_30151445
ES.10396.1	chr14	+	5366	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-160	370	-83	-51	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAATGCAAAGTTGTGT	NA	False	NA	NA	False	AATACA	-17	NA	30201408	30248650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.10	chr14	+	3196	11	FSM	ENSMUSG00000021962.10	ENSMUST00000225196.2	3194	11	5	-7	5	0	multi-exon	FALSE	canonical	2	9	junction_10	46.3676611443795	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201573	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182_30245769_30248143
ES.10396.11	chr14	+	5523	10	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	49.4974746830583	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201582	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201735_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.12	chr14	+	5495	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-8	0	intron_retention	FALSE	canonical	2	2	junction_7	53.7655500762338	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201583	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30244684_30244904_30245182
ES.10396.14	chr14	+	5464	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-20	0	intron_retention	FALSE	canonical	2	3	junction_3	51.7729417746375	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201613	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.16	chr14	+	2782	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-20	692	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	46.725093632865	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTCGTTTCTATGATA	NA	False	NA	NA	False	AATGAA	-3	NA	30201613	30246385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.17	chr14	+	5418	8	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_1	65.1826319674504	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAATTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-33	NA	30201613	30249019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201778_30206376_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.18	chr14	+	4595	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	46	935	-19	608	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCTTTATTGCTCTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	30201614	30248085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.19	chr14	+	8514	8	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	125	junction_5	17.3369959500321	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201614	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30244904_30245182
ES.10396.2	chr14	+	5734	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	-158	0	-81	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201410	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.20	chr14	+	5541	10	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-17	2	intron_retention	FALSE	canonical	0	0	junction_4	50.0644029670228	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAATTGTGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	30201616	30249015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227484_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.21	chr14	+	2666	7	NNC	ENSMUSG00000021962.10	novel	1317	8	NA	NA	-17	-2326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.2211557448286	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTGACATGTATGT	NA	False	NA	NA	False	AATAAA	-10	NA	30201616	30239101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30237081
ES.10396.22	chr14	+	5499	10	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-17	-15	intron_retention	FALSE	canonical	0	0	junction_3	51.3552141918555	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTAGCACCTACTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	30201616	30248998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201774_30204149_30204191_30206415_30206537_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.23	chr14	+	2906	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	49	2621	-16	706	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATACAGGTCATTTTCTA	NA	False	NA	NA	False	AATGAA	-17	NA	30201617	30246399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.24	chr14	+	5524	9	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_1	50.9593894684777	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201622	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201778_30206376_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.25	chr14	+	175	1	Intergenic	novelGene_8725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTCTAGGATAT	NA	False	NA	NA	False	NA	NA	NA	30230468	30230643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30230500_30230600
ES.10396.26	chr14	+	5242	3	NIC	ENSMUSG00000021962.10	novel	1841	5	NA	NA	-3852	-2	intron_retention	FALSE	canonical	3	153	junction_2	0.5	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAAAAATTCTAATTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	30241578	30249011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30241635_30243546_30244904_30245182
ES.10396.27	chr14	+	4321	4	NIC	ENSMUSG00000021962.10	novel	3194	11	NA	NA	-3837	-21	intron_retention	FALSE	canonical	1	1	junction_3	71.8903486027312	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGTTTTAGCACCT	NA	False	NA	NA	False	AATAAA	-6	NA	30241593	30248992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30241635_30243546_30244904_30245182_30247257_30248143
ES.10396.3	chr14	+	5607	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-68	0	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201423	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10396.4	chr14	+	4950	4	NIC	ENSMUSG00000021962.10	novel	960	6	NA	NA	-68	5616	intron_retention	FALSE	canonical	0	0	junction_3	82.1705543366966	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTGTGAATTCATAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	30201423	30213852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30209421
ES.10396.6	chr14	+	4720	11	NIC	ENSMUSG00000021962.10	novel	3194	11	NA	NA	-37	1	intron_retention	FALSE	canonical	1	1	junction_10	48.6312656631513	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTCTAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	30201531	30249014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182_30247257_30248143
ES.10396.7	chr14	+	5552	10	NNC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1	junction_9	51.0252902678033	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201547	30249020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245227
ES.10396.8	chr14	+	4885	3	FSM	ENSMUSG00000021962.10	ENSMUST00000225518.2	2044	3	-43	-2798	-20	2798	multi-exon	FALSE	canonical	3	168	junction_2	6	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGATGTTACCATCCA	NA	False	NA	NA	False	NA	NA	NA	30201548	30211034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30201774_30204149_30204191_30206415
ES.10396.9	chr14	+	4540	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	-19	602	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCATGCAGCTTTATTG	NA	False	NA	NA	False	AGTAAA	-10	NA	30201549	30248079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ES.10397.1	chr14	-	2077	1	Antisense	novelGene_ENSMUSG00000021962.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGGTACTGTGAGTCAA	NA	False	NA	NA	False	NA	NA	NA	30235569	30233492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_30233500_30235600
ES.10398.1	chr14	+	2772	1	Intergenic	novelGene_8726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	30249094	30251866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30249100_30251900
ES.10399.1	chr14	-	135	1	Intergenic	novelGene_8727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	30254472	30254337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30254300_30254500
ES.104.1	chr1	-	8553	10	FSM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-90	0	-90	0	multi-exon	FALSE	canonical	1	1	junction_1	2.330686329267	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTCTAGATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	13062964	12936772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_12991261_12991427_13009212_13009425_13014203_13014337_13059803_13061188_13062751
ES.104.2	chr1	-	8341	9	NIC	ENSMUSG00000025938.17	novel	8463	10	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	2.90473750965556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTCTAGATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	13062964	12936772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_12991261_12991427_13014203_13014337_13059803_13061188_13062751
ES.104.3	chr1	-	3799	4	ISM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-91	70584	-91	38686	5prime_fragment	FALSE	canonical	2	5	junction_2	0.471404520791032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCAGAATAATTTTTTG	NA	False	NA	NA	False	AGTAAA	-39	NA	13062965	13007356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13009425_13014203_13014337_13059803_13061188_13062751
ES.104.4	chr1	-	8082	3	NNC	ENSMUSG00000025938.17	novel	8463	10	NA	NA	-112	7810	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAATAGTAAAAC	NA	False	NA	NA	False	CATAAA	-14	NA	13062986	13038232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13044696_13059803_13061188_13062751
ES.104.5	chr1	-	1770	2	ISM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	-88	122856	-88	-13586	5prime_fragment	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATTTCACAGTTGTCT	NA	False	NA	NA	False	GATAAA	-11	NA	13062962	13059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13061188_13062751
ES.1040.1	chr1	+	1313	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	-6	7	-6	-7	multi-exon	FALSE	canonical	3	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAACCCCCGAGTTGCT	2849	False	NA	NA	False	AATAAA	-7	NA	92834696	92836150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92835146_92835286
ES.10400.1	chr14	-	160	1	Intergenic	novelGene_8728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAACCTCACAT	NA	False	NA	NA	False	NA	NA	NA	30255315	30255155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30255200_30255300
ES.10401.1	chr14	+	204	1	Intergenic	novelGene_8729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGGTTTAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	30259575	30259779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30259600_30259800
ES.10402.1	chr14	+	155	1	Intergenic	novelGene_8730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	30264549	30264704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30264500_30264700
ES.10402.2	chr14	+	319	1	Intergenic	novelGene_8731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30264549	30264868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30264500_30264900
ES.10403.1	chr14	+	2145	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	-22	1100	-22	-4	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	34	True	AATATA	-17	NA	30271065	30295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.11	chr14	+	1579	12	NNC	ENSMUSG00000021957.8	novel	1619	13	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	627.752385779011	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30271138	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30290295_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.12	chr14	+	2155	13	NIC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	1	-11	intron_retention	FALSE	canonical	3	1855	junction_3	151.131197602907	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30271138	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.13	chr14	+	3912	15	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	1	1805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	557.507266356965	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACCAAGCTGTGCGACA	NA	False	NA	NA	False	NA	NA	NA	30271138	30298482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293_30296699_30297763
ES.10403.14	chr14	+	3318	12	NIC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	1	-4	intron_retention	FALSE	canonical	3	1855	junction_3	159.268264777668	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	34	True	AATATA	-17	NA	30271138	30295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30291097_30291912_30292070_30292159_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.15	chr14	+	2652	16	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	1	1809	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	724.74610420171	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCTGTGCGACATATT	NA	False	NA	NA	False	NA	NA	NA	30271138	30298486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293_30295414_30296677_30296699_30297763
ES.10403.17	chr14	+	4946	11	NIC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	5	-11	intron_retention	FALSE	canonical	3	1855	junction_3	147.274607451522	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30271142	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30289018_30290120_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164
ES.10403.19	chr14	+	4861	16	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	5	3634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	724.74610420171	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	30271142	30300311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293_30296699_30297763_30298834_30299709
ES.10403.20	chr14	+	2051	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	5	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	574.72205785665	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30271142	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292060_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.22	chr14	+	4647	13	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	6820	1096	-1658	0	3prime_fragment	FALSE	canonical	3	1855	junction_2	151.898792146467	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30277907	30295581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.23	chr14	+	2904	14	NIC	ENSMUSG00000021957.8	novel	1962	14	NA	NA	-957	-10	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	577.765938153108	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATCCTCAGACT	NA	False	NA	28	True	AATATA	-11	NA	30278608	30295571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30279646_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.25	chr14	+	1635	11	ISM	ENSMUSG00000021957.8	ENSMUST00000225857.2	1962	14	2977	11	896	-11	3prime_fragment	FALSE	canonical	3	1879	junction_3	145.587808555524	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30282542	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.26	chr14	+	4126	10	ISM	ENSMUSG00000021957.8	ENSMUST00000225857.2	1962	14	5286	14	3205	-14	3prime_fragment	FALSE	canonical	3	1879	junction_2	142.417834227925	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAATTAATCCTCA	NA	False	NA	24	True	AATATA	-7	NA	30284851	30295567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.27	chr14	+	6706	7	NIC	ENSMUSG00000021957.8	novel	2438	11	NA	NA	3361	-4	intron_retention	FALSE	canonical	3	2015	junction_2	114.332482990035	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	34	True	AATATA	-17	NA	30285007	30295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30287637_30288898_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164
ES.10403.28	chr14	+	1599	11	NNC	ENSMUSG00000021957.8	novel	1401	8	NA	NA	-3327	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	868.326067787902	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30286628	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30286694_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292289_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.29	chr14	+	1610	11	NNC	ENSMUSG00000021957.8	novel	1401	8	NA	NA	-3326	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	655.70411772384	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTAATCCTCAGA	NA	False	NA	26	True	AATATA	-9	NA	30286629	30295569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30286705_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.3	chr14	+	2745	13	NIC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	1855	junction_3	152.488159831801	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	34	True	AATATA	-17	NA	30271082	30295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.30	chr14	+	4261	4	ISM	ENSMUSG00000021957.8	ENSMUST00000225857.2	1962	14	9215	4	-1175	-4	intron_retention	FALSE	canonical	3	1879	junction_1	106.182233291011	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTCAGACTCTTTTT	NA	False	NA	34	True	AATATA	-17	NA	30288780	30295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30289018_30290120_30290315_30290931_30291097_30291912
ES.10403.31	chr14	+	1229	8	FSM	ENSMUSG00000021957.8	ENSMUST00000225039.2	1401	8	161	11	161	-11	multi-exon	FALSE	canonical	3	2015	junction_2	113.794838662052	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30290116	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.32	chr14	+	773	7	NNC	ENSMUSG00000021957.8	novel	1401	8	NA	NA	265	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	836.871306314975	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30291926	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293_30295474_30295552
ES.10403.33	chr14	+	1740	1	Intergenic	novelGene_8734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAACCAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	30299107	30300847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30299100_30300800
ES.10403.34	chr14	+	248	1	Intergenic	novelGene_8735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTCGGGCAGTGG	NA	False	NA	NA	False	AAGAAA	-3	NA	30300455	30300703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30300500_30300700
ES.10403.7	chr14	+	3190	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	37	-4	-13	4	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGAGGATTAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	30271124	30296681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10403.8	chr14	+	2058	14	NNC	ENSMUSG00000021957.8	novel	3223	14	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	576.204270156639	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATCCTCAGAC	NA	False	NA	27	True	AATATA	-10	NA	30271135	30295570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30271338_30280677_30280796_30281718_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ES.10404.1	chr14	-	2811	1	Intergenic	novelGene_8732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAGCGACAGTT	343	False	NA	NA	False	NA	NA	NA	30277685	30274874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30274900_30277700
ES.10405.1	chr14	-	366	1	Intergenic	novelGene_8733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTGAACTTATATT	NA	False	NA	NA	False	NA	NA	NA	30285106	30284740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30284700_30285100
ES.10406.1	chr14	-	178	1	Intergenic	novelGene_8736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGAGGTAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	30310093	30309915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30309900_30310100
ES.10407.1	chr14	+	7320	1	Intergenic	novelGene_8737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGATCAGCCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	30332797	30340117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30332800_30340100
ES.10408.10	chr14	-	2854	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112211.9	2851	18	-1	-2	-1	0	multi-exon	FALSE	canonical	3	7	junction_8	28.1631431086409	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5422	False	NA	-3	True	AATAAA	-17	NA	30348166	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.11	chr14	-	4300	16	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_15	16.0684646296887	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5421	False	NA	-3	True	AATAAA	-17	NA	30348167	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.12	chr14	-	3685	15	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	87	junction_12	14.8454624415018	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	NA	False	NA	-5	True	AATAAA	-15	NA	30331261	30317312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30329152_30329244_30329408_30329564_30329626_30331058
ES.10408.15	chr14	-	5938	14	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-10	0	intron_retention	FALSE	canonical	3	76	junction_13	16.8044795380392	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	5449	False	NA	-5	True	AATAAA	-15	NA	30348139	30317312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30323189_30323716_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30331259_30332144_30332268_30347936
ES.10408.17	chr14	-	2468	12	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	450	0	intron_retention	FALSE	canonical	1	1	junction_11	34.722274747435	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	1350	False	NA	-5	True	AATAAA	-15	NA	30328852	30317312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327859_30328595
ES.10408.18	chr14	-	2013	13	NIC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	-45	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	33.8685161896545	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGGCTGTGGGGACAT	855	False	NA	-6	True	AATAAA	-14	NA	30329347	30317313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30329119_30329152_30329244
ES.10408.19	chr14	-	2258	15	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	156	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	30.3758765725538	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGGCTGTGGGGACAT	579	False	NA	-6	True	AATAAA	-14	NA	30329623	30317313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329524
ES.10408.2	chr14	-	6590	12	NNC	ENSMUSG00000021948.18	novel	2851	18	NA	NA	-4598	1	intron_retention	TRUE	canonical	0	0	junction_11	34.6970358607282	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTGGGGACATTTAT	8946	False	NA	-2	True	AATAAA	-18	NA	30336857	30317309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30324164_30324270_30324785_30326063_30326165_30327396_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30336772
ES.10408.20	chr14	-	2302	15	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	30.3758765725538	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTGGCTGTGGGGACA	457	False	NA	-7	True	AATAAA	-13	NA	30329745	30317314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329601
ES.10408.22	chr14	-	3008	17	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	7	-2	intron_retention	FALSE	canonical	3	76	junction_16	15.7806002341483	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAACCTGGCTGTGGGGA	5430	False	NA	-9	True	AATAAA	-11	NA	30348158	30317316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.24	chr14	-	4283	15	NIC	ENSMUSG00000021948.18	novel	2612	17	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	87	junction_11	15.5307463321198	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAACCTGGCTGTGGGG	NA	False	NA	-10	True	AATAAA	-10	NA	30332269	30317317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30323189_30323716_30323809_30323989_30324164_30324270_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144
ES.10408.25	chr14	-	3320	16	NIC	ENSMUSG00000021948.18	novel	2851	18	NA	NA	16	-3	intron_retention	FALSE	canonical	3	76	junction_15	16.2966935978505	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAACCTGGCTGTGGGG	5439	False	NA	-10	True	AATAAA	-10	NA	30348149	30317317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.26	chr14	-	2787	17	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	0	4	intron_retention	FALSE	canonical	3	76	junction_16	15.7806002341483	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCTGTATATATTG	5423	False	NA	-3	True	NA	NA	NA	30348165	30317544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.29	chr14	-	2023	15	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	157	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	30.3758765725538	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAATAGGCTGTATATA	580	False	NA	-6	True	NA	NA	NA	30329622	30317547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329524
ES.10408.3	chr14	-	6436	12	NIC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	157	1	intron_retention	FALSE	canonical	3	87	junction_10	11.9869074582739	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTGGGGACATTTAT	580	False	NA	-2	True	AATAAA	-18	NA	30329622	30317309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30320804_30321274_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564
ES.10408.31	chr14	-	2071	15	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	30.3758765725538	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATAATAGGCTGTAT	452	False	NA	-9	True	NA	NA	NA	30329750	30317550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329601
ES.10408.32	chr14	-	3212	13	NIC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	23	-2	intron_retention	FALSE	canonical	3	87	junction_12	15.8559049638367	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATATAATAGGCTGT	923	False	NA	-11	True	NA	NA	NA	30329279	30317552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244
ES.10408.33	chr14	-	2545	19	NNC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-14	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	36.2786285420065	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAATGTAGTTATTGAA	5445	False	NA	-50	True	NA	NA	NA	30348143	30317591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332003_30332077_30332144_30332268_30347936
ES.10408.4	chr14	-	4170	17	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-11	0	intron_retention	FALSE	canonical	3	76	junction_16	16.4235920248891	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5448	False	NA	-3	True	AATAAA	-17	NA	30348140	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.5	chr14	-	2841	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	-64	0	-64	0	multi-exon	FALSE	canonical	3	76	junction_17	15.936508975905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5357	False	NA	-3	True	AATAAA	-17	NA	30348231	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.6	chr14	-	4103	17	NNC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-2359	0	intron_retention	FALSE	canonical	1	3	junction_16	29.1943246839176	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	NA	False	NA	-3	True	AATAAA	-17	NA	30334618	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30334481
ES.10408.7	chr14	-	4860	14	NIC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	76	junction_13	16.6157407369243	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5429	False	NA	-3	True	AATAAA	-17	NA	30348159	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30317983_30320674_30320804_30321274_30323189_30323716_30323809_30323989_30324164_30324270_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ES.10408.8	chr14	-	3453	17	NNC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_15	38.5534835488312	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5422	False	NA	-3	True	AATAAA	-17	NA	30348166	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30344278_30344388_30347936
ES.10408.9	chr14	-	3054	17	NNC	ENSMUSG00000021948.18	novel	2777	18	NA	NA	7	0	intron_retention	FALSE	canonical	2	6	junction_13	29.010706536553	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5430	False	NA	-3	True	AATAAA	-17	NA	30348158	30317310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327859_30329119_30329152_30329244_30329408_30329524_30329626_30331058_30331259_30332144_30332268_30347936
ES.10409.1	chr14	+	2403	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	-16	0	-16	0	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376300	30413274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.10	chr14	+	5809	12	NNC	ENSMUSG00000052395.18	novel	2347	13	NA	NA	7	-32	intron_retention	FALSE	canonical	0	0	junction_5	18.5053041312953	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376350	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30388774_30396144_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.11	chr14	+	2530	14	NNC	ENSMUSG00000052395.18	novel	2347	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.1995957543475	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376350	30413274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30385211_30385382_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.12	chr14	+	3379	20	Fusion	ENSMUSG00000052395.18_ENSMUSG00000006527.17	novel	2960	19	NA	NA	7	-6374	multi-exon	TRUE	canonical	0	0	junction_11	29.4848662998532	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAGTAAAACAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	30376350	30513689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690
ES.10409.13	chr14	+	2088	11	NNC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	-8	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.1057205789795	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376355	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30396126_30396210_30399686_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.14	chr14	+	3699	13	NNC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	-2	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.2282568499839	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376361	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30409309_30410837_30411661_30411912_30412398
ES.10409.15	chr14	+	2170	12	NIC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	0	-32	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	14.9450785177204	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376363	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.16	chr14	+	3571	6	ISM	ENSMUSG00000052395.18	ENSMUST00000228686.2	2347	13	20441	-3	-7504	3	3prime_fragment	FALSE	canonical	3	5	junction_1	18.8	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCCCTGTGTCAGT	NA	False	NA	NA	False	NA	NA	NA	30396804	30413277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.17	chr14	+	3544	5	NIC	ENSMUSG00000052395.18	novel	2347	13	NA	NA	-6701	0	intron_retention	FALSE	canonical	3	31	junction_3	9.65336728815391	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30397607	30413274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.18	chr14	+	9041	14	NNC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_1	37.5646188815483	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCGTGCTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	30437117	30544680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437358_30487919_30488059_30491755_30491851_30495841_30496083_30518349_30518410_30519532_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.19	chr14	+	3281	21	NIC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.2978908549693	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437117	30540302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437199_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.2	chr14	+	2471	14	NNC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.2808934536456	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376316	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30377068_30377139_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398890_30398988_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.20	chr14	+	3272	21	NNC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.3005990358012	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437118	30540302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437199_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507865_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.21	chr14	+	4405	21	NIC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	18	1147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.2978908549693	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAATTTTTTTTTCTTT	NA	False	NA	NA	False	AATATA	-25	NA	30437141	30541450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437199_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.22	chr14	+	3413	21	NNC	ENSMUSG00000006527.17	novel	2960	19	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.2978908549693	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGGCTCTAGGGTTTT	NA	False	NA	28	True	ATTAAA	-20	NA	30437146	30540304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437358_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.23	chr14	+	4430	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	-12	864	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGGTGAATTTTCACT	NA	False	NA	NA	False	ATTAAA	-17	NA	30437559	30541167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.24	chr14	+	3474	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	-9	4372	-9	3	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCTAGGGTTTTGA	NA	False	NA	30	True	ATTAAA	-22	NA	30437562	30540306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.25	chr14	+	4179	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-879	-1	-3	1	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGGCTCTAGGGTTTT	NA	False	NA	28	True	ATTAAA	-20	NA	30437568	30540304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.26	chr14	+	2416	10	ISM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	-2	30988	-2	-6373	5prime_fragment	FALSE	canonical	3	68	junction_1	12.8360987881352	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAGTAAAACAAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	30437569	30513690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690
ES.10409.27	chr14	+	4609	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	0	3228	0	1147	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAATTTTTTTTTCTTT	NA	False	NA	NA	False	AATATA	-25	NA	30437571	30541450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.28	chr14	+	3845	23	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5708569453612	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTAAGTGGCTCTAGG	NA	False	NA	23	True	ATTAAA	-15	NA	30437574	30540299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437833_30438247_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.29	chr14	+	3270	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	4	4563	4	-187	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAATTTGGTTATTTTCA	NA	False	NA	NA	False	AAAACA	-26	NA	30437575	30540115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.3	chr14	+	2422	13	NNC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	19.1528936020992	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376327	30413274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398890_30398988_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.30	chr14	+	4691	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	4	1141	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGTGAATTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	30437575	30541444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.31	chr14	+	3547	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437577	30540302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.32	chr14	+	7830	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	-1	8	1	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATGCGTGCTTTTCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	30437579	30544679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.33	chr14	+	6162	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	8	1667	8	-1667	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCATTAGACCAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	30437579	30543011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.34	chr14	+	3860	23	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3223935712645	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAGTGGCTCTAGGGT	NA	False	NA	25	True	ATTAAA	-17	NA	30437579	30540301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437833_30438247_30438546_30457079_30457190_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.35	chr14	+	3295	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	8	132	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGTCTGAATTACCAT	NA	False	NA	NA	False	AAAAAG	-14	NA	30437579	30540052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.36	chr14	+	4314	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	10	3513	10	862	multi-exon	FALSE	canonical	3	68	junction_1	13.3913218167588	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCAGGTGAATTTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	30437581	30541165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.37	chr14	+	3622	22	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.4170111367162	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30437590	30540302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437833_30438365_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.38	chr14	+	7878	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	41	-10	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAGTGAATATATGC	NA	False	NA	NA	False	ATTAAA	-14	NA	30437612	30544668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.39	chr14	+	3111	19	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	96	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	25.760770251501	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAGTGGCTCTAGGGT	NA	False	NA	25	True	ATTAAA	-17	NA	30437667	30540301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.4	chr14	+	2358	13	FSM	ENSMUSG00000052395.18	ENSMUST00000228686.2	2347	13	-17	6	3	-6	multi-exon	FALSE	canonical	3	5	junction_8	13.9351175093718	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGATGTGTCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30376346	30413268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.40	chr14	+	4190	19	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	125	1147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.2829712141135	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAATTTTTTTTTCTTT	NA	False	NA	NA	False	AATATA	-25	NA	30437696	30541450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437833_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524548_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.41	chr14	+	4463	22	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	172	1141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.6477315100485	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGTGAATTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	30437743	30541444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524548_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.42	chr14	+	2274	11	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	202	-6403	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	29.4429957714904	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30437773	30513660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690
ES.10409.43	chr14	+	4888	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-442	-1147	434	1147	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAATTTTTTTTTCTTT	NA	False	NA	NA	False	AATATA	-25	NA	30438005	30541450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.44	chr14	+	3847	23	NNC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-383	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.9352033940982	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAGTGGCTCTAGGGT	NA	False	NA	25	True	ATTAAA	-17	NA	30438064	30540301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30511106_30511182_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.45	chr14	+	3736	22	NIC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-346	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	25.9699809260048	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGGCTCTAGGGTT	NA	False	NA	26	True	ATTAAA	-18	NA	30438101	30540302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.46	chr14	+	3735	22	NNC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-330	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8611843326321	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTAAGTGGCTCTAGG	NA	False	NA	23	True	ATTAAA	-15	NA	30438117	30540299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30438546_30457079_30457190_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.47	chr14	+	4408	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	-321	-788	-321	788	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGCTCATTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	30438126	30541091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.48	chr14	+	4847	22	NIC	ENSMUSG00000006527.17	novel	3299	21	NA	NA	-312	1144	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	25.9699809260048	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGAATTTTTTTTTC	NA	False	NA	NA	False	AATATA	-22	NA	30438135	30541447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30438546_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.49	chr14	+	4919	17	NNC	ENSMUSG00000006527.17	novel	633	2	NA	NA	13738	1144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7066675897612	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGAATTTTTTTTTC	NA	False	NA	NA	False	AATATA	-22	NA	30501768	30541447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30502907_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ES.10409.5	chr14	+	2132	12	NIC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	6	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.8228833138476	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376349	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30376433_30380265_30380352_30382153_30382271_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.50	chr14	+	3518	7	ISM	ENSMUSG00000006527.17	ENSMUST00000227303.2	2960	19	17676	18244	-12601	1995	intron_retention	FALSE	canonical	3	88	junction_2	8.34665601703261	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAAATATATCAAGATGT	NA	False	NA	NA	False	NA	NA	NA	30505706	30522058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532
ES.10409.51	chr14	+	1492	1	NIC	ENSMUSG00000006527.17	novel	2936	21	NA	NA	-6107	-6371	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTAAAACAAAGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	30512200	30513692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30512200_30513700
ES.10409.52	chr14	+	5365	3	ISM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	99791	26	19055	-26	3prime_fragment	FALSE	canonical	3	104	junction_1	8	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAACAAAAATATT	NA	False	NA	NA	False	ATTAAA	-41	NA	30537362	30544652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30537611_30538704_30538834_30539664
ES.10409.53	chr14	+	6121	2	NNC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	22011	1861	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCAGACTGGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	30540318	30546539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30545303_30545402
ES.10409.6	chr14	+	2260	14	NNC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	6	-32	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	20.8715428700216	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376349	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30381072_30381136_30382153_30382271_30383352_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.7	chr14	+	2311	13	NNC	ENSMUSG00000052395.18	novel	2347	13	NA	NA	6	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	18.5522909636519	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376349	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396144_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.10409.8	chr14	+	2494	14	NNC	ENSMUSG00000052395.18	novel	2347	13	NA	NA	6	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.6010282962746	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376349	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404328_30404494_30404707_30404814_30411661_30411912_30412398
ES.10409.9	chr14	+	2014	11	NIC	ENSMUSG00000052395.18	novel	2387	13	NA	NA	7	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.3245214324953	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30376350	30413242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30376433_30380265_30380352_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ES.1041.1	chr1	+	3199	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-124	262	-124	7	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6533	False	NA	26	True	ATTAAA	-20	NA	92838380	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.10	chr1	+	5342	6	NIC	ENSMUSG00000026269.15	novel	4345	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	45	junction_1	6.33719180710194	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGACCTCCCTTCCTG	6705	False	NA	19	True	ATTAAA	-13	NA	92838552	92848294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92844194_92844432_92845469_92845739_92846826_92846905_92847049_92847283
ES.1041.11	chr1	+	3034	11	NNC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2976682529263	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTGACCTCCCTTCCT	6705	False	NA	18	True	ATTAAA	-12	NA	92838552	92848293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92839221_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.12	chr1	+	4345	8	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	52	1	10	-1	intron_retention	FALSE	canonical	3	45	junction_1	8.7084289452161	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACTTTAGTCTCTGT	6709	False	NA	NA	False	AAAAAG	-17	NA	92838556	92848562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739
ES.1041.13	chr1	+	1696	8	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	58	2644	-12	124	5prime_fragment	FALSE	canonical	3	45	junction_1	8.7084289452161	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTCCAGTCTAAAGGATC	6715	False	NA	NA	False	AGTAAA	-11	NA	92838562	92845919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739
ES.1041.14	chr1	+	3149	11	NNC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-11	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.5048711864498	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6716	False	NA	26	True	ATTAAA	-20	NA	92838563	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845222_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.15	chr1	+	3386	10	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-8	7	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	7.57350808353421	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6719	False	NA	26	True	ATTAAA	-20	NA	92838566	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.16	chr1	+	1200	1	FSM	ENSMUSG00000026269.15	ENSMUST00000180306.2	2556	1	-5	1361	-5	-1361	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTTTCCGCACAGAGC	6722	False	NA	NA	False	AATAGA	-16	NA	92838569	92839769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92838600_92839800
ES.1041.17	chr1	+	3619	9	NNC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-5	7	intron_retention	FALSE	canonical	0	0	junction_1	24.6563886244519	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6722	False	NA	26	True	ATTAAA	-20	NA	92838569	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92839221_92842780_92842922_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92846826_92846905_92847049_92847283
ES.1041.18	chr1	+	3511	9	NNC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	3	8	intron_retention	FALSE	canonical	0	0	junction_6	21.1763429326218	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTTCCTGTCTGTCAC	6730	False	NA	27	True	ATTAAA	-21	NA	92838577	92848302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844669_92844868_92845469_92845739_92845849_92846698_92846826_92846905_92847049_92847283
ES.1041.19	chr1	+	2844	10	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	18.3632752128592	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGACCTCCCTTCCTGTC	6731	False	NA	21	True	ATTAAA	-15	NA	92838578	92848296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92842922_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.2	chr1	+	4521	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-21	-1163	-21	1163	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTCCCAGGGTGTTG	6636	False	NA	NA	False	NA	NA	NA	92838483	92849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.20	chr1	+	3435	5	NIC	ENSMUSG00000026269.15	novel	2504	8	NA	NA	-436	7	intron_retention	FALSE	canonical	3	54	junction_2	3.53553390593274	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	NA	False	NA	26	True	ATTAAA	-20	NA	92844076	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92844194_92844432_92844669_92844868_92845469_92845739_92846826_92846905
ES.1041.21	chr1	+	1846	1	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-887	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGACCTCCCTTCCTG	NA	False	NA	19	True	ATTAAA	-13	NA	92846448	92848294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92846400_92848300
ES.1041.22	chr1	+	5194	2	NIC	ENSMUSG00000026269.15	novel	1844	7	NA	NA	-658	0	intron_retention	FALSE	canonical	3	57	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCCTGATGTCTATGG	NA	False	NA	NA	False	NA	NA	NA	92846677	92852106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92847049_92847283
ES.1041.3	chr1	+	3356	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTAGTCTCTGTG	6638	False	NA	NA	False	AAAAAG	-18	NA	92838485	92848563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.4	chr1	+	4207	9	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-13	7	intron_retention	FALSE	canonical	3	45	junction_1	7.64750776397121	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTTCCTGTCTGTCA	6644	False	NA	26	True	ATTAAA	-20	NA	92838491	92848301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92845469_92845739_92846826_92846905_92847049_92847283
ES.1041.5	chr1	+	3108	11	NNC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	18.7800425984607	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCCCTTCCTGTCTGT	6652	False	NA	24	True	ATTAAA	-18	NA	92838499	92848299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846564_92846826_92846905_92847049_92847283
ES.1041.6	chr1	+	3152	10	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	18.3632752128592	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGACTTTAGTCTCT	6687	False	NA	NA	False	AAAAAG	-15	NA	92838534	92848560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92842922_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.7	chr1	+	3088	9	NIC	ENSMUSG00000026269.15	novel	3337	11	NA	NA	-9	5	intron_retention	FALSE	canonical	1	2	junction_2	19.4422220952236	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCCCTTCCTGTCTGT	6690	False	NA	24	True	ATTAAA	-18	NA	92838537	92848299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92839206_92842780_92842922_92844076_92844194_92844432_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ES.1041.8	chr1	+	4347	8	FSM	ENSMUSG00000026269.15	ENSMUST00000179854.8	4345	8	-2	0	-2	0	multi-exon	FALSE	canonical	3	45	junction_1	7.85324578679129	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGACCTCCCTTCCTG	6697	False	NA	19	True	ATTAAA	-13	NA	92838544	92848294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92845469_92845739_92846826_92846905_92847049_92847283
ES.1041.9	chr1	+	2648	1	FSM	ENSMUSG00000026269.15	ENSMUST00000180306.2	2556	1	-24	-68	4	68	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAGAAAAGAAGA	6703	False	NA	NA	False	NA	NA	NA	92838550	92841198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92838600_92841200
ES.10410.1	chr14	-	1185	1	Intergenic	novelGene_8738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCGTAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	30502711	30501526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30501500_30502700
ES.10411.1	chr14	-	177	1	Intergenic	novelGene_8739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30533981	30533804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30533800_30534000
ES.10412.1	chr14	+	3761	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGGTGGTTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	30547527	30599167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.10	chr14	+	3140	7	NIC	ENSMUSG00000006526.14	novel	3822	9	NA	NA	8	120	intron_retention	FALSE	canonical	3	211	junction_6	9.60902353693305	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACATGGATTTGTTTG	NA	False	NA	4	True	TTTAAA	-16	NA	30547558	30597077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.11	chr14	+	5237	7	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	8	141	intron_retention	FALSE	canonical	3	200	junction_2	12.4554762610223	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTTGTTTGTTTGTT	NA	False	NA	11	True	NA	NA	NA	30547558	30596668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.13	chr14	+	1343	7	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	22	-49	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	80.3563245108242	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTTTGTAACTCT	NA	False	NA	-39	True	NA	NA	NA	30547572	30596872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30594506_30594657_30596334
ES.10412.14	chr14	+	3509	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	32	201	28	-201	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGTGTGGAATGCTGA	NA	False	NA	NA	False	NA	NA	NA	30547578	30598966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.15	chr14	+	6365	7	NNC	ENSMUSG00000006526.14	novel	3822	9	NA	NA	30	119	intron_retention	FALSE	canonical	0	0	junction_2	101.802777739881	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGACATGGATTTGTTT	NA	False	NA	3	True	TTTAAA	-15	NA	30547580	30597076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30547848_30584836_30584931_30585144_30585225_30586385_30586482_30588579_30593516_30594506_30594657_30596334
ES.10412.16	chr14	+	5622	7	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	36	124	intron_retention	FALSE	canonical	3	200	junction_2	12.4554762610223	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGATTTGTTTGCCTT	NA	False	NA	8	True	TTTAAA	-20	NA	30547586	30597081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.17	chr14	+	3912	8	NNC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	77.5028636732284	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGGTGGTTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	30547631	30599167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594912_30596334
ES.10412.18	chr14	+	2467	1	Intergenic	novelGene_8740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5765	False	NA	NA	False	NA	NA	NA	30554940	30557407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30554900_30557400
ES.10412.19	chr14	+	3446	4	ISM	ENSMUSG00000006526.14	ENSMUST00000227776.2	1156	6	4031	-2243	-36	-3	3prime_fragment	FALSE	canonical	3	211	junction_3	13.2245562832516	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACATGGTGGTTGCTTT	NA	False	NA	NA	False	AATAAA	-29	NA	30592432	30599164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.2	chr14	+	1661	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	-8	2089	-8	121	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGGATTTGTTTGC	NA	False	NA	5	True	TTTAAA	-17	NA	30547538	30597078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.20	chr14	+	7594	1	Genic_Genomic	ENSMUSG00000042485.8_ENSMUSG00000006526.14	novel	NA	NA	NA	NA	1247	-415	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGACGTTGCCATGGC	2118	False	NA	NA	False	AATAAA	-22	NA	30595558	30603152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_30595600_30603200
ES.10412.3	chr14	+	1248	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	-5	2499	-5	141	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTTTGTTTGTTTGTT	NA	False	NA	11	True	NA	NA	NA	30547541	30596668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.4	chr14	+	3341	4	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	3	-14	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	99.4697050474275	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTAACTCGGAGACATG	NA	False	NA	NA	False	AATAAA	-18	NA	30547553	30599153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30593437_30593516_30594506_30594657_30596334
ES.10412.5	chr14	+	3809	9	FSM	ENSMUSG00000006526.14	ENSMUST00000227246.2	3822	9	7	6	3	-6	multi-exon	FALSE	canonical	1	2	junction_2	95.194209382714	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGACATGGTGGTTGC	NA	False	NA	NA	False	AATAAA	-26	NA	30547553	30599161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30585144_30585225_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.6	chr14	+	3546	9	NNC	ENSMUSG00000006526.14	novel	3822	9	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.9001886142965	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGGAGACATGGTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	30547554	30599159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334_30597143_30597322
ES.10412.7	chr14	+	1488	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	8	2246	4	0	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTACTGTTTTTTG	NA	False	NA	10	True	NA	NA	NA	30547554	30596921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ES.10412.8	chr14	+	6440	6	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	4	-45	intron_retention	FALSE	canonical	3	200	junction_2	13.4372616257927	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTGTAACTCTTTAT	NA	False	NA	-35	True	NA	NA	NA	30547554	30596876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30592821_30593437_30594657_30596334
ES.10412.9	chr14	+	5445	7	NIC	ENSMUSG00000006526.14	novel	3742	8	NA	NA	4	-49	intron_retention	FALSE	canonical	3	200	junction_2	12.4554762610223	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTTTGTAACTCT	NA	False	NA	-39	True	NA	NA	NA	30547554	30596872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30592821_30593437_30593516_30594506_30594657_30596334
ES.10413.1	chr14	+	189	1	Intergenic	novelGene_8741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTTGTTTTTTTG	9746	False	NA	NA	False	NA	NA	NA	30606396	30606585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30606400_30606600
ES.10414.1	chr14	+	2835	22	NNC	ENSMUSG00000021922.18	novel	795	4	NA	NA	2218	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.663256584627815	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGGCAGTTGATGTCA	2778	False	NA	NA	False	AATAAA	-14	NA	30610695	30623801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30610813_30611529_30611635_30611753_30611917_30612055_30612167_30612605_30612735_30613337_30613455_30613660_30613830_30613909_30614036_30614222_30614405_30614492_30614679_30616984_30617125_30617360_30617516_30617767_30617798_30618059_30618120_30618514_30618728_30619479_30619531_30619813_30619847_30619936_30620054_30621276_30621446_30622841_30622997_30623091_30623189_30623591
ES.10414.2	chr14	+	4850	15	NIC	ENSMUSG00000021922.18	novel	2928	22	NA	NA	3967	0	intron_retention	FALSE	canonical	0	0	junction_1	0.728431359084684	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTTGATGTCATGATT	4527	False	NA	NA	False	AATAAA	-19	NA	30612444	30623806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30612735_30613337_30613455_30613660_30613830_30613909_30614036_30614222_30614405_30614492_30617125_30617360_30617516_30617767_30617798_30618059_30618120_30618514_30618728_30619813_30620054_30621276_30621446_30622841_30622997_30623091_30623189_30623591
ES.10415.1	chr14	+	3861	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	43	341	9	-338	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCCAGGGAGTGACAC	NA	False	NA	NA	False	AATAAA	-27	NA	30673376	30710437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.10	chr14	+	3255	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	86	904	5	330	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTGTCTAAGTCCAGG	NA	False	NA	NA	False	TTTAAA	-21	NA	30673419	30709874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.11	chr14	+	2782	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	86	1377	5	0	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATCTTTGTTACTGT	NA	False	NA	NA	False	AAGAAA	-37	NA	30673419	30709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.12	chr14	+	3566	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	88	591	7	-588	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGCTGTAAGGCTGGA	NA	False	NA	NA	False	AATAAA	-28	NA	30673421	30710187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.13	chr14	+	4122	15	NNC	ENSMUSG00000021918.11	novel	4245	15	NA	NA	-4	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	16.9809316828119	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTAAATTTTCACTTAT	NA	False	NA	1	True	NA	NA	NA	30673451	30710752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681274_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.14	chr14	+	3918	1	NIC	ENSMUSG00000021918.11	novel	4098	14	NA	NA	-4	1512	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTGTTTTCTACAGCA	NA	False	NA	NA	False	NA	NA	NA	30673451	30677369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30673500_30677400
ES.10415.15	chr14	+	4368	14	NIC	ENSMUSG00000021918.11	novel	4245	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	18	junction_8	13.3828469211889	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATCTTTGTTACTGT	NA	False	NA	NA	False	AAGAAA	-37	NA	30673451	30709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.16	chr14	+	1211	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	19	22	-2	-22	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTTTCTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	30673453	30681513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
ES.10415.17	chr14	+	3392	14	NIC	ENSMUSG00000021918.11	novel	4245	15	NA	NA	5	-346	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.6728990532608	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGTTTGGCCCAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	30673477	30710429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30673676_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696264_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.18	chr14	+	180	1	Genic_Genomic	ENSMUSG00000021918.11	novel	NA	NA	NA	NA	2657	173	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTTTATGCTT	4253	False	NA	NA	False	NA	NA	NA	30681528	30681708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_30681500_30681700
ES.10415.19	chr14	+	174	1	ISM	ENSMUSG00000021918.11	ENSMUST00000228392.2	6686	12	25251	10752	19747	-10579	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATAGTTTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	30698618	30698792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30698600_30698800
ES.10415.2	chr14	+	2956	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	60	1229	-21	5	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCATGCTGATGCTTGC	NA	False	NA	NA	False	ATTAAA	-40	NA	30673393	30709549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.3	chr14	+	2453	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	72	1573	-9	-169	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTTTCATCTTAAAA	NA	False	NA	NA	False	ACTAAA	-12	NA	30673405	30709202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.4	chr14	+	4161	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	82	2	1	1	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGTGTATGGTGTG	NA	False	NA	25	True	AGTAAA	-16	NA	30673415	30710776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.5	chr14	+	4019	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	82	-3	1	0	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTATGGTGTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	30673415	30710778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.6	chr14	+	3672	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	82	344	1	-344	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTTGGCCCAGGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	30673415	30710431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.7	chr14	+	4068	15	NIC	ENSMUSG00000021918.11	novel	4245	15	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	16.4001306615004	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGTGTATGGTGTG	NA	False	NA	25	True	AGTAAA	-16	NA	30673415	30710776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696264_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.8	chr14	+	4052	14	NIC	ENSMUSG00000021918.11	novel	4245	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.9414609592343	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTATGGTGT	NA	False	NA	24	True	AGTAAA	-15	NA	30673415	30710775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30673676_30675759_30676027_30678837_30679036_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ES.10415.9	chr14	+	1523	7	ISM	ENSMUSG00000021918.11	ENSMUST00000228392.2	6686	12	50	17030	3	6239	5prime_fragment	FALSE	canonical	3	40	junction_5	8.09149072929224	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGTGAGTGGTACAC	NA	False	NA	NA	False	AATAAA	-12	NA	30673417	30692514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119
ES.10416.1	chr14	-	6095	1	Antisense	novelGene_ENSMUSG00000021918.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGACTGTCCAGACAG	NA	False	NA	NA	False	NA	NA	NA	30682335	30676240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_30676200_30682300
ES.10417.1	chr14	-	154	1	Intergenic	novelGene_8742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAGAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	30695680	30695526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30695500_30695700
ES.10418.1	chr14	+	224	1	Intergenic	novelGene_8744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTACCTGGGTCTTTCT	2877	False	NA	NA	False	NA	NA	NA	30719757	30719981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30719800_30720000
ES.10419.1	chr14	-	3844	1	Intergenic	novelGene_8743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGGTGAAGAATTCCA	NA	False	NA	NA	False	NA	NA	NA	30721662	30717818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30717800_30721700
ES.1042.10	chr1	+	4043	9	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	-13	0	intron_retention	FALSE	canonical	2	2	junction_3	38.0983513422825	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	2637	False	NA	NA	False	AATAAA	-14	NA	92862474	92875663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92862737_92865666_92865799_92867044_92867242_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92874983_92875230
ES.1042.11	chr1	+	1998	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-9	-721	-9	721	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAATAATCCAGAAC	2641	False	NA	NA	False	AATAAA	-7	NA	92862478	92869415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
ES.1042.13	chr1	+	3483	8	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	13	37	intron_retention	FALSE	canonical	2	2	junction_3	40.9843175582354	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTAGTAGCCAGCTT	2663	False	NA	NA	False	AAAAAG	-15	NA	92862500	92875700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92862737_92865666_92865799_92867044_92867242_92870203_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495
ES.1042.14	chr1	+	3775	1	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	2784	419	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGTACGCTATCAC	144	False	NA	NA	False	NA	NA	NA	92865338	92869113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92865300_92869100
ES.1042.15	chr1	+	2411	10	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	-2426	-5	intron_retention	FALSE	canonical	3	87	junction_3	16.7427891241072	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGATTAGTCTTGTT	560	False	NA	NA	False	AATAAA	-9	NA	92865754	92875658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874983_92875230
ES.1042.2	chr1	+	3210	10	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	51	-1	intron_retention	FALSE	canonical	3	87	junction_4	17.3169438184073	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTAGTCTTGTTCCAA	2311	False	NA	NA	False	AATAAA	-13	NA	92862148	92875662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92873001_92874495_92874983_92875230
ES.1042.3	chr1	+	2869	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	78	-45	78	45	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCCAGCTTCAACTGGA	2338	False	NA	NA	False	AAAAAG	-23	NA	92862175	92875708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ES.1042.4	chr1	+	1324	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-56	0	-56	0	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCGGACCTGCTGTGGT	2594	False	NA	18	True	CATAAA	-18	NA	92862431	92868694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
ES.1042.5	chr1	+	2357	11	NIC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	-46	17	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	34.5259322828508	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCCAAGGCCAAATT	2604	False	NA	NA	False	AATAAA	-31	NA	92862441	92875680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_92862737_92865666_92865799_92867044_92867242_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ES.1042.6	chr1	+	4880	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	344	-2322	-46	2322	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACCAGAAGTTGCCTCT	2604	False	NA	NA	False	NA	NA	NA	92862441	92877985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ES.1042.7	chr1	+	2487	3	ISM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-37	-419	-37	419	intron_retention	FALSE	canonical	3	122	junction_1	8.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGTACGCTATCAC	2613	False	NA	NA	False	NA	NA	NA	92862450	92869113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_92862737_92865666_92865799_92867044
ES.1042.8	chr1	+	5162	11	NNC	ENSMUSG00000026270.12	novel	2902	12	NA	NA	-35	36	intron_retention	FALSE	canonical	0	0	junction_4	36.6225340466768	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTAGTAGCCAGCT	2615	False	NA	NA	False	AAAAAG	-14	NA	92862452	92875699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92869307_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92874696_92874936_92874983_92875230
ES.1042.9	chr1	+	1710	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	-23	-419	-23	419	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTGTACGCTATCAC	2627	False	NA	NA	False	NA	NA	NA	92862464	92869113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
ES.10420.1	chr14	+	2401	6	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_1	35.3553390593274	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	8	True	AATAAA	-19	NA	30723356	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30733191_30733441
ES.10420.10	chr14	+	5150	9	NIC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	-40	71	intron_retention	FALSE	canonical	3	12	junction_1	40.1053300697052	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTGCTCCCCCCCCC	3762	False	NA	80	True	AATAAA	-19	NA	30723592	30734019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732988_30733077_30733191_30733441
ES.10420.11	chr14	+	1780	11	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49.2309861774066	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3789	False	NA	8	True	AATAAA	-19	NA	30723619	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723835_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.12	chr14	+	1754	10	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	-11	71	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	35.7536150291732	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTGCTCCCCCCCCC	3791	False	NA	80	True	AATAAA	-19	NA	30723621	30734019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723835_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.13	chr14	+	1899	9	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	37.6023602982579	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3802	False	NA	8	True	AATAAA	-19	NA	30723632	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723835_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.14	chr14	+	1925	11	NIC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	6	66	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	49.4368283772331	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGATCTATTTGCTCCCC	3808	False	NA	75	True	AATAAA	-14	NA	30723638	30734014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30723955_30726674_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.15	chr14	+	1706	10	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	46.9675485551881	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	3809	False	NA	3	True	AATAAA	-14	NA	30723639	30733942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733150_30733191_30733441
ES.10420.16	chr14	+	3931	8	NIC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	31	junction_1	35.9125923001151	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTATTTGCTTCCCCA	3809	False	NA	5	True	AATAAA	-16	NA	30723639	30733944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30723955_30728415_30728470_30728589_30730825_30731691_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.17	chr14	+	3094	10	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.4192655120242	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	3819	False	NA	3	True	AATAAA	-14	NA	30723649	30733942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30724174_30727309_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.18	chr14	+	1608	9	NNC	ENSMUSG00000021916.17	novel	1923	9	NA	NA	232	0	intron_retention	FALSE	canonical	3	11	junction_5	48.1222401806067	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	4034	False	NA	8	True	AATAAA	-19	NA	30723864	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731728_30732037_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.19	chr14	+	2874	2	ISM	ENSMUSG00000021916.17	ENSMUST00000228255.2	1692	8	-18	2553	-18	510	intron_retention	FALSE	canonical	3	128	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8567	False	NA	NA	False	NA	NA	NA	30728397	30731391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30728470_30728589
ES.10420.2	chr14	+	2067	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	-50	1	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	8	True	AATAAA	-19	NA	30723356	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.20	chr14	+	1387	2	ISM	ENSMUSG00000021916.17	ENSMUST00000227783.2	955	3	-187	6	-187	-2	intron_retention	FALSE	canonical	3	110	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	NA	False	NA	3	True	AATAAA	-14	NA	30732101	30733942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30732367_30732820
ES.10420.3	chr14	+	1570	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	-72	0	71	multi-exon	FALSE	canonical	3	45	junction_1	28.2055944017416	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTGCTCCCCCCCCC	3526	False	NA	80	True	AATAAA	-19	NA	30723356	30734019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.4	chr14	+	3087	6	NIC	ENSMUSG00000021916.17	novel	1692	8	NA	NA	0	0	intron_retention	TRUE	canonical	3	31	junction_1	39.7763748976701	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTATTTGCTTCCCCA	3526	False	NA	5	True	AATAAA	-16	NA	30723356	30733944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30732123_30732253
ES.10420.5	chr14	+	4859	10	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	12	junction_1	37.8300292242963	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3527	False	NA	8	True	AATAAA	-19	NA	30723357	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.6	chr14	+	1595	11	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.6193377165917	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGCTTCCCCATTTTT	3527	False	NA	10	True	AATAAA	-21	NA	30723357	30733949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30723386_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.7	chr14	+	1488	11	NNC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.4889369699944	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3527	False	NA	8	True	AATAAA	-19	NA	30723357	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723386_30726674_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731728_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.8	chr14	+	1620	11	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	1	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2005411223722	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTGCTCCCCCCCCC	3527	False	NA	80	True	AATAAA	-19	NA	30723357	30734019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723386_30723903_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10420.9	chr14	+	1414	10	NNC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	43.7670601657863	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3528	False	NA	8	True	AATAAA	-19	NA	30723358	30733947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731728_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ES.10421.1	chr14	-	958	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	-5	-4	-5	4	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTCTTTTTGCAGT	NA	False	NA	0	True	AATAAA	-21	NA	30723571	30721778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ES.10421.2	chr14	-	1435	2	FSM	ENSMUSG00000021917.17	ENSMUST00000226290.2	1241	2	-193	-1	47	0	multi-exon	FALSE	canonical	3	1787	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723519	30721783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30722861_30723161
ES.10421.3	chr14	-	595	3	NIC	ENSMUSG00000021917.17	novel	702	4	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	892	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723300	30721783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30722180_30722800_30722861_30723161
ES.10421.4	chr14	-	768	3	FSM	ENSMUSG00000021917.17	ENSMUST00000227838.2	378	3	0	-390	0	0	multi-exon	FALSE	canonical	3	1787	junction_2	3.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723307	30721783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30722180_30722634_30722861_30723161
ES.10421.7	chr14	-	1036	4	NNC	ENSMUSG00000021917.17	novel	1005	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	826.394982237106	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTTGTTTTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	30723580	30721784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30722180_30722559_30722722_30722800_30722861_30723161
ES.10421.8	chr14	-	669	4	NNC	ENSMUSG00000021917.17	novel	1005	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_3	784.81122995703	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTTGTTTTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	30723571	30721784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30722180_30722634_30722722_30722800_30722861_30723444
ES.10422.1	chr14	+	7964	31	NNC	ENSMUSG00000042323.18	novel	6212	30	NA	NA	-134	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.7327233215994	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGTGGTTCTGTTTAA	8081	False	NA	27	True	AATAAA	-34	NA	30740960	30843562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741092_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.10	chr14	+	7811	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_14	51.5069466728087	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8216	False	NA	14	True	AATAAA	-21	NA	30741095	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.101	chr14	+	5101	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTTTCCTTTGTTTA	8247	False	NA	NA	False	AATACA	-16	NA	30741126	30841071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.102	chr14	+	7042	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	553	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTGCAGAGTATGCCAG	8247	False	NA	NA	False	AATAAA	-21	NA	30741126	30842551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.104	chr14	+	6987	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	550	combination_of_known_junctions	FALSE	canonical	3	38	junction_14	53.6666591262116	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTACTGCAGAGTATGC	8248	False	NA	NA	False	AATAAA	-18	NA	30741127	30842548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.105	chr14	+	6472	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	58.8497822850688	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8248	False	NA	NA	False	AAGAAA	-28	NA	30741127	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.106	chr14	+	5372	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	52.0857839423474	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCCTTTGTTTAAAA	8248	False	NA	NA	False	AATACA	-19	NA	30741127	30841074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.107	chr14	+	7785	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	58.9409214571864	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8248	False	NA	11	True	AATAAA	-18	NA	30741127	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.108	chr14	+	8031	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	57.9358481425792	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8248	False	NA	13	True	AATAAA	-20	NA	30741127	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.109	chr14	+	5147	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_26	44.4163396115641	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCCTTTGTTTAAAA	8248	False	NA	NA	False	AATACA	-19	NA	30741127	30841074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.11	chr14	+	7775	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	51.6846746007462	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8216	False	NA	14	True	AATAAA	-21	NA	30741095	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.110	chr14	+	7908	32	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_23	60.9451058848989	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8248	False	NA	13	True	AATAAA	-20	NA	30741127	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809479_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.111	chr14	+	8047	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	57.153261651263	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8248	False	NA	14	True	AATAAA	-21	NA	30741127	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.112	chr14	+	3099	20	ISM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	33	45062	1	-7619	5prime_fragment	FALSE	canonical	3	38	junction_15	52.0642049823409	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGTTCCTTTTTATT	8248	False	NA	NA	False	NA	NA	NA	30741127	30796936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727
ES.10422.113	chr14	+	6964	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	33	-431	1	431	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGCATTCCCTGGTAG	8248	False	NA	NA	False	AATAAA	-25	NA	30741127	30842429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.114	chr14	+	3607	22	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_14	54.2526214921962	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTATGTGGGTGGTAG	8250	False	NA	4	True	AATACA	-44	NA	30741129	30807001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742
ES.10422.115	chr14	+	7943	32	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.7403124710573	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8251	False	NA	14	True	AATAAA	-21	NA	30741130	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744766_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.117	chr14	+	7673	30	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	70.2006636349822	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGATTTGGATCAGCCA	8258	False	NA	7	True	AATAAA	-14	NA	30741137	30843542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772204_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829050_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.119	chr14	+	6695	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	-9	547	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	41.5514808978429	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACGTACTGCAGAGTA	8267	False	NA	NA	False	AATAAA	-15	NA	30741146	30842545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.12	chr14	+	7851	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	61.6234172661299	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8216	False	NA	14	True	AATAAA	-21	NA	30741095	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804509_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.121	chr14	+	4880	27	ISM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	54	13947	-7	-6300	5prime_fragment	FALSE	canonical	3	98	junction_2	35.082236439678	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACCTGAATGCGGC	8269	False	NA	NA	False	NA	NA	NA	30741148	30829602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065
ES.10422.122	chr14	+	2748	17	NIC	ENSMUSG00000042323.18	novel	3137	20	NA	NA	-7	-7668	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	48.6575646097295	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCCTAAAGAAATAGAGGA	8269	False	NA	NA	False	AAAACA	-38	NA	30741148	30796887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
ES.10422.123	chr14	+	7958	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	59.5072202441541	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGATTTGGATCAGCCA	8270	False	NA	7	True	AATAAA	-14	NA	30741149	30843542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.125	chr14	+	6248	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_13	56.4751764543995	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8278	False	NA	NA	False	AAGAAA	-9	NA	30741157	30841979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.126	chr14	+	6518	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	55.6636715995046	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8319	False	NA	NA	False	AAGAAA	-28	NA	30741198	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.127	chr14	+	7777	30	FSM	ENSMUSG00000042323.18	ENSMUST00000090214.11	6212	30	-14	-1551	-10	0	multi-exon	FALSE	canonical	3	74	junction_25	40.7196850028347	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	3648	False	NA	14	True	AATAAA	-21	NA	30747453	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.129	chr14	+	7447	28	NIC	ENSMUSG00000042323.18	novel	6212	30	NA	NA	63	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_25	50.0905627027616	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	3725	False	NA	13	True	AATAAA	-20	NA	30747530	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.13	chr14	+	7619	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	1	9	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTTTGGTGGTTCTGT	8216	False	NA	23	True	AATAAA	-30	NA	30741095	30843558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.130	chr14	+	3903	15	ISM	ENSMUSG00000042323.18	ENSMUST00000146325.8	3137	20	6461	13097	107	-13097	internal_fragment	FALSE	canonical	3	61	junction_8	40.2736177380961	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGGTGATATGCCTTGG	3769	False	NA	NA	False	AATAAA	-18	NA	30747574	30791458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278
ES.10422.131	chr14	+	3007	1	Intergenic	novelGene_8746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGATATAGCGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	30754520	30757527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30754500_30757500
ES.10422.132	chr14	+	6188	27	ISM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	16891	-547	8551	547	3prime_fragment	FALSE	canonical	3	38	junction_9	53.2131473721902	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACGTACTGCAGAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	30757985	30842545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.133	chr14	+	4636	12	ISM	ENSMUSG00000042323.18	ENSMUST00000022471.12	5871	28	19836	32807	17868	-827	internal_fragment	FALSE	canonical	3	107	junction_1	35.5253372507125	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTCTTGTACTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	30767302	30809170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742
ES.10422.135	chr14	+	5091	21	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	18852	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	71.4492127318419	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	NA	False	NA	NA	False	AAGAAA	-28	NA	30768286	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804509_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811424_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.137	chr14	+	6264	18	ISM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	37096	-1548	-27970	-3	3prime_fragment	FALSE	canonical	3	59	junction_1	53.1429488303069	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	NA	False	NA	11	True	AATAAA	-18	NA	30778190	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.138	chr14	+	6056	16	NNC	ENSMUSG00000042323.18	novel	6212	30	NA	NA	-22737	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.0907336270883	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	NA	False	NA	11	True	AATAAA	-18	NA	30783423	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835964_30838969_30839041_30839156_30839374_30840685
ES.10422.139	chr14	+	5778	15	ISM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	45606	2	-19460	-2	3prime_fragment	FALSE	canonical	3	94	junction_11	34.85362979955	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	NA	False	NA	12	True	AATAAA	-19	NA	30786700	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.14	chr14	+	6216	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	56.4757690088124	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8216	False	NA	NA	False	AAGAAA	-28	NA	30741095	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.140	chr14	+	144	1	Intergenic	novelGene_8747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30787552	30787696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_30787600_30787700
ES.10422.142	chr14	+	4390	10	NNC	ENSMUSG00000042323.18	novel	6212	30	NA	NA	621	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	68.5225023866856	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	NA	False	NA	13	True	AATAAA	-20	NA	30806781	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30807007_30809472_30809619_30811421_30811580_30827346_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.143	chr14	+	4367	10	ISM	ENSMUSG00000042323.18	ENSMUST00000090214.11	6212	30	62003	-1542	3310	-9	3prime_fragment	FALSE	canonical	3	74	junction_5	53.6782826168215	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTGATTTGGATCAGC	NA	False	NA	5	True	AATAAA	-12	NA	30809470	30843540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.144	chr14	+	3908	7	ISM	ENSMUSG00000042323.18	ENSMUST00000022471.12	5871	28	63953	-1571	5259	-1	3prime_fragment	FALSE	canonical	3	58	junction_4	56.6374924900066	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	NA	False	NA	13	True	AATAAA	-20	NA	30811419	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.145	chr14	+	3746	6	ISM	ENSMUSG00000042323.18	ENSMUST00000022471.12	5871	28	79836	-1568	21142	-4	3prime_fragment	FALSE	canonical	3	58	junction_3	62.009676664211	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTGGATCAGCCAGGT	1461	False	NA	10	True	AATAAA	-17	NA	30827302	30843545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.146	chr14	+	3347	5	NNC	ENSMUSG00000042323.18	novel	6212	30	NA	NA	22099	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.7452314837125	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	2418	False	NA	11	True	AATAAA	-18	NA	30828259	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30828306_30829065_30829268_30835805_30835894_30839223_30839374_30840685
ES.10422.147	chr14	+	7538	1	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	28300	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8619	False	NA	NA	False	AAGAAA	-28	NA	30834460	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30834500_30842000
ES.10422.148	chr14	+	5599	3	ISM	ENSMUSG00000042323.18	ENSMUST00000090214.11	6212	30	89055	-1551	30362	0	3prime_fragment	FALSE	canonical	3	217	junction_1	5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	30836522	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30839041_30839156_30839374_30840685
ES.10422.15	chr14	+	8115	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	1	-1550	1	-1	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8216	False	NA	13	True	AATAAA	-20	NA	30741095	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.16	chr14	+	8027	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_29	58.5598051605113	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8216	False	NA	13	True	AATAAA	-20	NA	30741095	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.17	chr14	+	7879	31	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_26	64.1957423302616	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8216	False	NA	14	True	AATAAA	-21	NA	30741095	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829050_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.18	chr14	+	7519	28	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	52.7301799663788	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGTTTGGTGGTTCTG	8216	False	NA	22	True	AATAAA	-29	NA	30741095	30843557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.19	chr14	+	7789	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	56.8188251276713	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8217	False	NA	12	True	AATAAA	-19	NA	30741096	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.2	chr14	+	13012	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	76	junction_26	40.481172500209	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8181	False	NA	13	True	AATAAA	-20	NA	30741060	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30811580_30827303_30827488_30828094_30828306_30829065_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.20	chr14	+	7669	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.6827821471332	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8217	False	NA	14	True	AATAAA	-21	NA	30741096	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.21	chr14	+	6444	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	4	26	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	51.8998608433159	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTGACCTTGTCTTTC	8219	False	NA	NA	False	NA	NA	NA	30741098	30842024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.22	chr14	+	5423	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	6	2478	-5	-5	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTTTCCTTTGTTTA	8221	False	NA	NA	False	AATACA	-16	NA	30741100	30841071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.23	chr14	+	7929	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-3	5	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	45.903473603736	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCCAGGTTTGGTGGTT	8223	False	NA	19	True	AATAAA	-26	NA	30741102	30843554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.24	chr14	+	7871	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	38	junction_13	56.4751764543995	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8224	False	NA	13	True	AATAAA	-20	NA	30741103	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.25	chr14	+	7645	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_14	54.1897840848961	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8224	False	NA	12	True	AATAAA	-19	NA	30741103	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.26	chr14	+	6186	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	41.828936499227	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8226	False	NA	NA	False	AAGAAA	-9	NA	30741105	30841979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.28	chr14	+	7643	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_26	44.4163396115641	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8226	False	NA	13	True	AATAAA	-20	NA	30741105	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.3	chr14	+	7927	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	-14	9	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	46.1102543427767	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTTTGGTGGTTCTGT	8201	False	NA	23	True	AATAAA	-30	NA	30741080	30843558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.31	chr14	+	8173	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.7727332012936	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8226	False	NA	13	True	AATAAA	-20	NA	30741105	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.33	chr14	+	6345	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	11	1551	0	0	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8226	False	NA	NA	False	AAGAAA	-28	NA	30741105	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.34	chr14	+	7174	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	551	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.7727332012936	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTACTGCAGAGTATGCC	8226	False	NA	NA	False	AATAAA	-19	NA	30741105	30842549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.36	chr14	+	7904	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_28	48.6832848339368	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8227	False	NA	14	True	AATAAA	-21	NA	30741106	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.37	chr14	+	8020	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	56.5724421169527	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8227	False	NA	13	True	AATAAA	-20	NA	30741106	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745128_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.38	chr14	+	1685	6	ISM	ENSMUSG00000042323.18	ENSMUST00000112094.8	5154	30	-19	85556	2	1348	5prime_fragment	FALSE	canonical	3	98	junction_2	45.391629184245	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTGGTGTTTGTCTG	8228	False	NA	NA	False	TTTAAA	-24	NA	30741107	30755368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365
ES.10422.39	chr14	+	7963	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	45.4904629809614	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.41	chr14	+	7543	29	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.7168381816404	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	13	True	AATAAA	-20	NA	30741107	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.42	chr14	+	7902	32	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	56.6883698823379	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	13	True	AATAAA	-20	NA	30741107	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789901_30796742_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.43	chr14	+	6621	33	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.7727332012936	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8228	False	NA	NA	False	AAGAAA	-28	NA	30741107	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.44	chr14	+	7797	30	FSM	ENSMUSG00000042323.18	ENSMUST00000112094.8	5154	30	-19	-2624	2	-1	multi-exon	FALSE	canonical	3	61	junction_10	41.3660323524055	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8228	False	NA	13	True	AATAAA	-20	NA	30741107	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.45	chr14	+	8004	32	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	53.2193740003641	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.46	chr14	+	7813	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	61.3491012340215	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8228	False	NA	11	True	AATAAA	-18	NA	30741107	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.47	chr14	+	6132	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	55.8888824537249	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8228	False	NA	NA	False	AAGAAA	-9	NA	30741107	30841979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.48	chr14	+	2675	18	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-14729	combination_of_known_splicesites	FALSE	canonical	3	38	junction_14	58.2671333045432	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGGAAAAATGTTGAAAG	8228	False	NA	NA	False	AATAAA	-22	NA	30741107	30789826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278
ES.10422.49	chr14	+	7841	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	38	junction_14	51.1345610456698	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8228	False	NA	12	True	AATAAA	-19	NA	30741107	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.50	chr14	+	7754	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	41.828936499227	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.51	chr14	+	8011	32	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	59.8075999472175	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839044_30839156_30839374_30840685
ES.10422.53	chr14	+	6187	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	41.5514808978429	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8228	False	NA	NA	False	AAGAAA	-28	NA	30741107	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.54	chr14	+	7867	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	52.0857839423474	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8228	False	NA	14	True	AATAAA	-21	NA	30741107	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.55	chr14	+	3788	23	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	55.8036144745997	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGGGTGGTAGCTAC	8228	False	NA	8	True	AATAGA	-27	NA	30741107	30807005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742
ES.10422.56	chr14	+	6711	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	551	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	54.7644398888338	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTACTGCAGAGTATGCC	8228	False	NA	NA	False	AATAAA	-19	NA	30741107	30842549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.57	chr14	+	6971	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	620	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	54.9256163673503	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGACCATTGACTCATCA	8228	False	NA	NA	False	AATAAA	-18	NA	30741107	30842618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.58	chr14	+	6578	34	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.0208909056495	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8228	False	NA	NA	False	AAGAAA	-28	NA	30741107	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30741760_30741786_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.59	chr14	+	7945	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	48.5930884119871	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGGTTTGGTGGTTC	8228	False	NA	20	True	AATAAA	-27	NA	30741107	30843555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.6	chr14	+	7822	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	62.7283738741001	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTTTGGTGGTTCTGT	8215	False	NA	23	True	AATAAA	-30	NA	30741094	30843558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.61	chr14	+	7905	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	55.6911024212027	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8228	False	NA	11	True	AATAAA	-18	NA	30741107	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.62	chr14	+	6524	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	56.1585943656341	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8229	False	NA	NA	False	AAGAAA	-28	NA	30741108	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.63	chr14	+	5422	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	60.6986209122181	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTTTCCTTTGTTTAA	8229	False	NA	NA	False	AATACA	-17	NA	30741108	30841072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745128_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.64	chr14	+	7848	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.929882460675	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8229	False	NA	12	True	AATAAA	-19	NA	30741108	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.65	chr14	+	8058	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8229	False	NA	14	True	AATAAA	-21	NA	30741108	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.66	chr14	+	5624	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	17	925	-2	-3	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTCCTTTGTTTAAA	8232	False	NA	NA	False	AATACA	-18	NA	30741111	30841073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.67	chr14	+	2880	18	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	-1	-7668	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	43.8212000960114	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCCTAAAGAAATAGAGGA	8233	False	NA	NA	False	AAAACA	-38	NA	30741112	30796887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
ES.10422.68	chr14	+	7817	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	48.5772366355259	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8234	False	NA	14	True	AATAAA	-21	NA	30741113	30843549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.69	chr14	+	3019	19	ISM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	19	46662	0	-7668	5prime_fragment	FALSE	canonical	3	98	junction_2	38.2001308898281	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCCTAAAGAAATAGAGGA	8234	False	NA	NA	False	AAAACA	-38	NA	30741113	30796887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727
ES.10422.7	chr14	+	6316	29	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_27	41.41112625311	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8215	False	NA	NA	False	AAGAAA	-28	NA	30741094	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839374_30840685
ES.10422.70	chr14	+	3742	20	NNC	ENSMUSG00000042323.18	novel	3137	20	NA	NA	1	624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	62.6353824585918	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTGACTCATCATGGA	8235	False	NA	NA	False	AATAAA	-22	NA	30741114	30842622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804534_30841878
ES.10422.71	chr14	+	6094	29	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	58.137723536093	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8235	False	NA	NA	False	AAGAAA	-28	NA	30741114	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804509_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.72	chr14	+	6338	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	60.3318433461142	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8235	False	NA	NA	False	AAGAAA	-28	NA	30741114	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.73	chr14	+	6361	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	45.903473603736	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8235	False	NA	NA	False	AAGAAA	-28	NA	30741114	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.74	chr14	+	7604	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	57.3872897112955	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8236	False	NA	11	True	AATAAA	-18	NA	30741115	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.78	chr14	+	5722	34	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	60.3572620463052	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTTTCCTTTGTTTA	8236	False	NA	NA	False	AATACA	-16	NA	30741115	30841071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.79	chr14	+	3947	18	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	3	-13492	combination_of_known_junctions	FALSE	canonical	3	38	junction_14	57.6621828900029	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTCAGCTTTTTA	8237	False	NA	NA	False	AATAAA	-12	NA	30741116	30791063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278
ES.10422.80	chr14	+	3331	7	ISM	ENSMUSG00000042323.18	ENSMUST00000146325.8	3137	20	3	47645	3	2890	5prime_fragment	FALSE	canonical	3	22	junction_3	77.0355257152323	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTTGCCTGTGAAT	8237	False	NA	NA	False	AATAAA	-17	NA	30741116	30756910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365
ES.10422.81	chr14	+	6192	30	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	54.6538126666492	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8237	False	NA	NA	False	AAGAAA	-9	NA	30741116	30841979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.82	chr14	+	7685	30	NNC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	60.2704171769411	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGGATCAGCCAGGTT	8237	False	NA	11	True	AATAAA	-18	NA	30741116	30843546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766619_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796938_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.83	chr14	+	7688	31	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	58.2336672381192	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTGGATCAGCCAGGT	8238	False	NA	10	True	AATAAA	-17	NA	30741117	30843545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839237_30839374_30840685
ES.10422.84	chr14	+	6676	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	-6	625	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	57.3872897112955	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGACTCATCATGGAC	8241	False	NA	NA	False	AATAAA	-23	NA	30741120	30842623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.86	chr14	+	6492	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8244	False	NA	NA	False	AAGAAA	-28	NA	30741123	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.87	chr14	+	7685	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_13	54.0851928499138	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATCAGCCAGGTTT	8244	False	NA	12	True	AATAAA	-19	NA	30741123	30843547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.88	chr14	+	6195	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	55.7825317122937	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8244	False	NA	NA	False	AAGAAA	-28	NA	30741123	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.89	chr14	+	11366	32	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-2	8	intron_retention	FALSE	non_canonical	0	0	junction_21	56.2197265048758	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGTTTGGTGGTTCTG	8245	False	NA	22	True	AATAAA	-29	NA	30741124	30843557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806028_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.9	chr14	+	7747	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_19	51.0539571417685	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8215	False	NA	13	True	AATAAA	-20	NA	30741094	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804509_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.90	chr14	+	6231	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_14	51.5069466728087	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8245	False	NA	NA	False	AAGAAA	-28	NA	30741124	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.91	chr14	+	7663	30	NNC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	61.597172441552	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8245	False	NA	13	True	AATAAA	-20	NA	30741124	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776120_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.92	chr14	+	7979	32	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	52.4439743674197	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8246	False	NA	13	True	AATAAA	-20	NA	30741125	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.93	chr14	+	5163	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.6827821471332	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTTTCCTTTGTTTAA	8246	False	NA	NA	False	AATACA	-17	NA	30741125	30841072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.94	chr14	+	7929	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_29	56.1744903054955	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGATCAGCCAGGTTTG	8246	False	NA	13	True	AATAAA	-20	NA	30741125	30843548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30838969_30839041_30839156_30839374_30840685
ES.10422.95	chr14	+	6274	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_14	51.1345610456698	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8246	False	NA	NA	False	AAGAAA	-28	NA	30741125	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ES.10422.97	chr14	+	5983	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	-24	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATACTTTAAGAAAAT	8247	False	NA	NA	False	TTTAAA	-30	NA	30741126	30841953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10422.98	chr14	+	5932	28	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	47.7330827406807	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8247	False	NA	NA	False	AAGAAA	-28	NA	30741126	30841998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ES.10423.1	chr14	-	5694	5	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	25	0	intron_retention	TRUE	canonical	3	793	junction_2	102.394763049679	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740921	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30736984_30737231_30739125_30739232_30739371_30739764
ES.10423.10	chr14	-	1978	14	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_9	225.913739625281	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740975	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.11	chr14	-	1780	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_10	218.114789100808	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741005	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.12	chr14	-	5639	6	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	775	junction_3	113.939633139659	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740994	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30736984_30737231_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.13	chr14	-	2917	14	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	91	1	-17	0	intron_retention	FALSE	canonical	3	775	junction_10	85.3513448693453	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741018	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764
ES.10423.14	chr14	-	1677	8	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	476	0	intron_retention	FALSE	canonical	3	793	junction_6	93.4678816383424	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30738411	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278
ES.10423.16	chr14	-	1935	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	775	junction_9	85.8071320189962	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740994	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.19	chr14	-	3853	9	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	164	0	intron_retention	FALSE	canonical	3	51	junction_5	297.376208488507	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740782	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764
ES.10423.2	chr14	-	3632	10	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	24	0	intron_retention	FALSE	canonical	3	775	junction_6	96.9879717628257	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740922	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764
ES.10423.21	chr14	-	2655	11	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	13	0	intron_retention	FALSE	canonical	3	775	junction_6	88.0184071657741	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741037	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735753_30736009_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.22	chr14	-	2774	8	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-199	0	intron_retention	FALSE	canonical	3	775	junction_5	97.0297661040368	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30739323	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.23	chr14	-	2730	11	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-19	0	intron_retention	FALSE	canonical	3	51	junction_6	270.580561016493	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741069	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.24	chr14	-	3825	10	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	793	junction_6	87.3562310949317	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740969	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738865_30739013_30739125_30739232
ES.10423.25	chr14	-	1778	15	NNC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	242.811172119659	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740969	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30734592_30734679_30734747_30735123_30735254_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.26	chr14	-	1747	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	249.473457339974	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740969	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30740885
ES.10423.27	chr14	-	2056	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	775	junction_9	81.2119733498984	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740971	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.28	chr14	-	4260	8	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	10	0	intron_retention	FALSE	canonical	3	108	junction_5	299.234260834455	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740991	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232
ES.10423.29	chr14	-	2195	14	NNC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_11	251.106050346681	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740983	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738865_30739013_30739128_30739232_30739371_30739764_30739824_30740885
ES.10423.3	chr14	-	3284	13	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	119	0	11	0	intron_retention	FALSE	canonical	3	775	junction_10	86.8860604470015	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740990	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.30	chr14	-	5100	6	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	793	junction_3	93.1892697685737	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740975	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735282_30735385_30736984_30737231_30737342_30738278_30739125_30739232
ES.10423.31	chr14	-	1974	10	NNC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	650	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	294.437106826811	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30738237	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30737463
ES.10423.32	chr14	-	2900	9	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	24	0	intron_retention	FALSE	canonical	2	8	junction_8	377.984105981984	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741026	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30740885
ES.10423.34	chr14	-	2202	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	51	junction_9	238.796836231309	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740989	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.35	chr14	-	4366	8	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-357	0	intron_retention	FALSE	canonical	3	775	junction_5	91.4450877938922	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740211	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735753_30736009_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.36	chr14	-	2327	13	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	793	junction_8	81.4416543026697	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740969	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.37	chr14	-	3139	13	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	51	junction_8	247.671769799377	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740989	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736635_30736862_30736984_30737231_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.38	chr14	-	2458	13	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	51	junction_8	248.304025116165	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30741018	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.39	chr14	-	2201	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	775	junction_10	84.0654858854677	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30740971	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739824_30740885
ES.10423.4	chr14	-	2197	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	-250	0	-250	0	multi-exon	FALSE	canonical	3	775	junction_10	82.9678140200482	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741359	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.44	chr14	-	5060	9	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	8	-1	intron_retention	FALSE	canonical	3	775	junction_6	91.6248294677813	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30740993	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.45	chr14	-	1852	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	10	-1	intron_retention	FALSE	canonical	3	108	junction_9	226.227382079108	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30740991	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.46	chr14	-	2172	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	108	junction_10	224.029346133479	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30741004	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739824_30740885
ES.10423.47	chr14	-	2783	10	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	108	junction_5	267.901492859863	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30740971	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.48	chr14	-	4562	5	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	122	-1	intron_retention	FALSE	canonical	3	108	junction_2	380.029604109996	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTAAGATTTATTT	NA	False	NA	-3	True	AATAAA	-18	NA	30739732	30734391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30738350_30738783_30738865_30739013_30739125_30739232
ES.10423.49	chr14	-	1834	13	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	-2	intron_retention	FALSE	canonical	1	12	junction_5	334.591573165454	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30740969	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735523_30735609_30735753_30736009_30736185_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.5	chr14	-	3729	8	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_7	330.160505184484	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740975	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736984_30737231_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30740885
ES.10423.50	chr14	-	5030	5	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	793	junction_2	109.602691572789	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30740969	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30736984_30737231_30738865_30739013_30739824_30740885
ES.10423.51	chr14	-	3226	9	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	51	junction_4	297.656655183451	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30740971	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.52	chr14	-	4125	9	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	775	junction_6	92.13169921368	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30741018	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30736185_30736546_30736635_30736862_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.54	chr14	-	3840	10	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	6	-2	intron_retention	FALSE	canonical	3	51	junction_6	286.454572702588	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30740995	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764
ES.10423.55	chr14	-	3622	10	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	24	-2	intron_retention	FALSE	canonical	3	51	junction_5	283.849247069159	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGTTTAAGATTTATT	NA	False	NA	-4	True	AATAAA	-17	NA	30741026	30734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30736635_30736862_30736984_30737231_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.56	chr14	-	2150	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	108	junction_9	224.500471131937	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTTTAAGATTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	30741016	30734393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.57	chr14	-	1754	15	NNC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	-2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	316.229677898317	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTTTAAGATTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	30740972	30734393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738769_30738865_30739013_30739121_30739232_30739371_30739764_30739824_30740885
ES.10423.58	chr14	-	2733	11	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	1	-3	intron_retention	FALSE	canonical	3	775	junction_6	89.562045532692	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTTTAAGATTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	30740969	30734393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.59	chr14	-	3200	13	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	108	junction_10	233.121689729253	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTTTAAGATTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	30740972	30734393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232
ES.10423.6	chr14	-	3627	11	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	775	junction_6	91.0415289854031	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741005	30734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30736984_30737231_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.61	chr14	-	3842	1	FSM	ENSMUSG00000042354.8	ENSMUST00000227389.2	1656	1	652	-2838	652	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTTTAAGATTTAT	NA	False	NA	-5	True	AATAAA	-16	NA	30738235	30734393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30734400_30738200
ES.10423.63	chr14	-	5591	6	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	11	-4	intron_retention	FALSE	canonical	3	775	junction_3	104.725546071625	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGTGTTTAAGATTTA	NA	False	NA	-6	True	AATAAA	-15	NA	30740959	30734394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30735753_30736009_30738412_30738783_30738865_30739013_30739125_30739232
ES.10423.64	chr14	-	1859	14	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	37	junction_9	234.126350351672	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGTGTTTAAGATTTA	NA	False	NA	-6	True	AATAAA	-15	NA	30740986	30734394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.65	chr14	-	3788	11	NIC	ENSMUSG00000042354.8	novel	1765	15	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	108	junction_8	252.579987330746	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGTGTTTAAGATTTA	NA	False	NA	-6	True	AATAAA	-15	NA	30740971	30734394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736984_30737231_30737342_30738278_30738350_30738783_30738865_30739013_30739125_30739232
ES.10423.8	chr14	-	1760	14	NNC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.647295463989	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741021	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30734547_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ES.10423.9	chr14	-	4610	10	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	108	junction_6	268.317712910886	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30740989	30734390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30736984_30737231_30738350_30738783_30738865_30739013_30739125_30739232_30739371_30739764
ES.10424.1	chr14	-	932	1	Intergenic	novelGene_8745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGCCTT	NA	False	NA	NA	False	AAGAAA	-32	NA	30742561	30741629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30741600_30742600
ES.10425.1	chr14	-	1433	1	Intergenic	novelGene_8748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30816891	30815458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_30815500_30816900
ES.10426.1	chr14	-	444	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	-134	1	-16	-1	multi-exon	FALSE	canonical	3	152	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATTTCAGCCATTT	NA	False	NA	-12	True	AATAAA	-17	NA	30850929	30846462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30846567_30850589
ES.10426.2	chr14	-	502	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	-58	-18	-5	18	multi-exon	FALSE	canonical	3	53	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	30850918	30846617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30846791_30850589
ES.10427.1	chr14	+	1639	14	NNC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	-282	11	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	168.357959024407	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGCTCATCATTTGAC	NA	False	NA	31	True	AATAAA	-33	NA	30852727	30861092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30852832_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.10	chr14	+	6904	9	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	36	-2	intron_retention	FALSE	canonical	3	592	junction_4	24.1709407140061	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30853045	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857062_30857294_30857545_30857642_30858125_30858224_30858327_30858552_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.11	chr14	+	2093	11	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	-3	intron_retention	FALSE	canonical	3	592	junction_5	22.7211355350035	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGCCTCTGCTTCATT	NA	False	NA	14	True	AATAAA	-16	NA	30853047	30861075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.12	chr14	+	1783	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	168.767092055729	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	False	NA	17	True	AATAAA	-19	NA	30853047	30861078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857748_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.13	chr14	+	1796	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	167.657900492739	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30853047	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860574_30860631_30860737
ES.10427.15	chr14	+	2224	11	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	0	intron_retention	FALSE	canonical	3	592	junction_6	27.1707563383871	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853047	30861080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.16	chr14	+	3887	8	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	38	-2	intron_retention	FALSE	canonical	3	604	junction_5	25.6013392506832	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30853047	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30860430_30860565_30860631_30860737
ES.10427.18	chr14	+	5496	10	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	38	0	intron_retention	FALSE	canonical	3	592	junction_5	23.6256817786529	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853047	30861080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860631_30860737
ES.10427.19	chr14	+	1757	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	168.577585600411	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	False	NA	17	True	AATAAA	-19	NA	30853054	30861078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857685_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.22	chr14	+	1875	13	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	56	0	intron_retention	FALSE	canonical	3	592	junction_7	25.4110649564756	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	False	NA	17	True	AATAAA	-19	NA	30853065	30861078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.23	chr14	+	5384	12	NNC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	56	0	intron_retention	FALSE	canonical	0	0	junction_3	180.667174935497	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	30853065	30861081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30856881_30856986_30857062_30857294_30857355_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.24	chr14	+	1926	12	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	67	0	intron_retention	FALSE	canonical	1	5	junction_5	181.590493798592	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853076	30861080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857685_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.25	chr14	+	7083	8	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	107	1	intron_retention	FALSE	canonical	3	592	junction_5	30.1269423118448	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGCTTCATTCCAG	NA	False	NA	18	True	AATAAA	-20	NA	30853116	30861079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30860430_30860565_30860631_30860737
ES.10427.26	chr14	+	5241	8	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	464	1	intron_retention	FALSE	canonical	3	528	junction_4	36.8355418428607	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGCTTCATTCCAG	NA	False	NA	18	True	AATAAA	-20	NA	30853771	30861079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857545_30857642_30857772_30857874_30857936_30858021_30858635_30860080_30860168_30860288_30860631_30860737
ES.10427.27	chr14	+	4413	12	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	618	1	intron_retention	FALSE	canonical	3	528	junction_6	39.0037082365042	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTGCTTCATTCCAG	NA	False	NA	18	True	AATAAA	-20	NA	30853925	30861079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860430_30860565_30860631_30860737
ES.10427.28	chr14	+	4394	11	NIC	ENSMUSG00000071547.5	novel	1858	13	NA	NA	700	-4	intron_retention	FALSE	canonical	3	592	junction_5	27.5189025943986	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGCCTCTGCTTCAT	NA	False	NA	13	True	AATAAA	-15	NA	30854007	30861074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.29	chr14	+	981	8	ISM	ENSMUSG00000071547.5	ENSMUST00000090212.5	1407	13	1064	2	1064	-2	3prime_fragment	FALSE	canonical	3	528	junction_1	42.6547602434778	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30857873	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.3	chr14	+	1908	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	-59	-1	-59	1	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTCATTCCAGCTC	NA	False	NA	21	True	AATAAA	-23	NA	30852950	30861082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.5	chr14	+	1868	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	169.373261688933	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30853010	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856960_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.6	chr14	+	2743	14	NNC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	168.995430770485	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTCTGCTTCATTC	NA	False	NA	15	True	AATAAA	-17	NA	30853014	30861076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30859175_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.7	chr14	+	2029	12	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	592	junction_6	26.239519749687	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	False	NA	17	True	AATAAA	-19	NA	30853014	30861078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ES.10427.9	chr14	+	3257	13	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	36	0	intron_retention	FALSE	canonical	3	528	junction_7	37.3365883997632	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGCTTCATTCCAGC	NA	False	NA	19	True	AATAAA	-21	NA	30853045	30861080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30860168_30860288_30860430_30860565_30860631_30860737
ES.10428.1	chr14	+	2872	1	Antisense	novelGene_ENSMUSG00000021910.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACTTTCGTCAAAAGT	4168	False	NA	NA	False	NA	NA	NA	30902920	30905792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_30902900_30905800
ES.10429.1	chr14	-	5589	22	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	-8	14316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.066235753036	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCCTGGCGTGGTGGCG	9313	False	NA	NA	False	NA	NA	NA	30928766	30878570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30878591_30892884_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.10	chr14	-	6781	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	883	junction_8	72.100115067854	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9432	False	NA	-4	True	AATAAA	-17	NA	30928647	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.13	chr14	-	5263	19	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	241.218722785405	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9439	False	NA	-4	True	AATAAA	-17	NA	30928640	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902952_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.15	chr14	-	5421	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	227.266891561441	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9433	False	NA	-4	True	AATAAA	-17	NA	30928646	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925357_30926414_30926483_30928523
ES.10429.16	chr14	-	5334	20	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	235.003318182503	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9422	False	NA	-4	True	AATAAA	-17	NA	30928657	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901847_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.17	chr14	-	10222	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	0	intron_retention	TRUE	canonical	3	57	junction_8	222.764350107171	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9439	False	NA	-4	True	AATAAA	-17	NA	30928640	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30906355_30906898_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.19	chr14	-	5302	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	233.809686559573	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9422	False	NA	-4	True	AATAAA	-17	NA	30928657	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.2	chr14	-	5468	22	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	14315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.882608865376	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGCGTGGTGGC	9439	False	NA	NA	False	NA	NA	NA	30928640	30878571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30878591_30892884_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.20	chr14	-	9450	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	931	junction_9	68.6191464360912	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9422	False	NA	-4	True	AATAAA	-17	NA	30928657	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.22	chr14	-	6789	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	228.914189973429	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9430	False	NA	-4	True	AATAAA	-17	NA	30928649	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.23	chr14	-	5303	20	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	-1121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	226.324002298962	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	NA	False	NA	-4	True	AATAAA	-17	NA	30926468	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909613_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398
ES.10429.24	chr14	-	5708	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	883	junction_7	73.5198166136386	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9430	False	NA	-4	True	AATAAA	-17	NA	30928649	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.25	chr14	-	5411	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	363.246373003228	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9440	False	NA	-4	True	AATAAA	-17	NA	30928639	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30904469_30904598_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.26	chr14	-	7885	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	403.9	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9446	False	NA	-4	True	AATAAA	-17	NA	30928633	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30900640_30901792_30901843_30902778_30902907_30904455_30904598_30906898_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.27	chr14	-	3981	10	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	308.042926301586	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9433	False	NA	-5	True	AATAAA	-16	NA	30928646	30892887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30906967_30928621
ES.10429.28	chr14	-	5392	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	228.324084362557	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9422	False	NA	-5	True	AATAAA	-16	NA	30928657	30892887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896779_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.30	chr14	-	5391	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	226.228264149288	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9440	False	NA	-5	True	AATAAA	-16	NA	30928639	30892887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925319_30926398_30926483_30928523
ES.10429.31	chr14	-	7884	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_20	298.525057574737	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTCTTCAAGGTTAT	9440	False	NA	-5	True	AATAAA	-16	NA	30928639	30892887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30904455_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928521
ES.10429.34	chr14	-	5702	22	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	299.92330841351	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9318	False	NA	-6	True	AATAAA	-15	NA	30928761	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30904455_30904598_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.35	chr14	-	6355	8	NNC	ENSMUSG00000021910.16	novel	4990	17	NA	NA	-656	-2	intron_retention	FALSE	canonical	2	5	junction_2	344.460121799613	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	8696	False	NA	-6	True	AATAAA	-15	NA	30905442	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894488_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778
ES.10429.36	chr14	-	5523	22	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	302.011089883631	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9439	False	NA	-6	True	AATAAA	-15	NA	30928640	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30895961_30896046_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.40	chr14	-	5479	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.062104024214	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9444	False	NA	-6	True	AATAAA	-15	NA	30928635	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902952_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.42	chr14	-	5389	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	228.511947171258	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9421	False	NA	-6	True	AATAAA	-15	NA	30928658	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894488_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.44	chr14	-	5366	22	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	293.646856258459	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9439	False	NA	-6	True	AATAAA	-15	NA	30928640	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30893408_30893477_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926478_30928521
ES.10429.45	chr14	-	5165	18	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	334.568047707358	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9440	False	NA	-6	True	AATAAA	-15	NA	30928639	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30902778_30902907_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.46	chr14	-	5456	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.584510583794	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9428	False	NA	-6	True	AATAAA	-15	NA	30928651	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896206_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.48	chr14	-	5504	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	229.551404918376	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9450	False	NA	-6	True	AATAAA	-15	NA	30928629	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907459_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.5	chr14	-	5577	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	-14	-4	11	4	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTCAAGGTTATAGAGA	9307	False	NA	0	True	AATAAA	-21	NA	30928772	30892882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.50	chr14	-	2682	6	NNC	ENSMUSG00000021910.16	novel	4990	17	NA	NA	-88	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	390.930479753114	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	30898633	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896853_30898286
ES.10429.51	chr14	-	5749	23	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	342.598061608909	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9428	False	NA	-6	True	AATAAA	-15	NA	30928651	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30904455_30904598_30906197_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.52	chr14	-	2762	9	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	354.267355785147	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9440	False	NA	-6	True	AATAAA	-15	NA	30928639	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30898334_30925177_30925367_30926398_30926483_30928523
ES.10429.53	chr14	-	5349	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	234.873597171328	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9433	False	NA	-6	True	AATAAA	-15	NA	30928646	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.57	chr14	-	5571	22	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	299.072951611288	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9448	False	NA	-6	True	AATAAA	-15	NA	30928631	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30904469_30904611_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.60	chr14	-	5374	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	32	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	235.517253574556	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTCTTCAAGGTTA	9454	False	NA	-6	True	AATAAA	-15	NA	30928625	30892888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.61	chr14	-	5456	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.564647757445	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9449	False	NA	-8	True	AATAAA	-13	NA	30928630	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894165_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.62	chr14	-	5354	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	436	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	220.621457478641	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9858	False	NA	-8	True	AATAAA	-13	NA	30928221	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928187
ES.10429.63	chr14	-	5444	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	229.551404918376	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9422	False	NA	-8	True	AATAAA	-13	NA	30928657	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907373_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.65	chr14	-	5247	19	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	318.114409887037	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9422	False	NA	-8	True	AATAAA	-13	NA	30928657	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30925183_30925367_30926398_30926483_30928523
ES.10429.67	chr14	-	2675	8	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	374.097008045469	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9449	False	NA	-8	True	AATAAA	-13	NA	30928630	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896815_30925177_30925367_30926398_30926483_30928523
ES.10429.68	chr14	-	5419	21	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	308.673755768125	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATGAGTCTTCAAGGT	9439	False	NA	-8	True	AATAAA	-13	NA	30928640	30892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907373_30908715_30908837_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.69	chr14	-	2827	7	NNC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	371.355475102884	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACATGAGTCTTCAAGG	9440	False	NA	-9	True	AATAAA	-12	NA	30928639	30892891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30898673_30928521
ES.10429.7	chr14	-	10767	19	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	1	intron_retention	FALSE	canonical	3	935	junction_14	68.1705377873919	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTCTTCAAGGTTATAG	9439	False	NA	-3	True	AATAAA	-18	NA	30928640	30892885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.70	chr14	-	5249	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	18	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	232.059668513709	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACAACATGAGTCTTCA	9440	False	NA	-12	True	AATAAA	-9	NA	30928639	30892894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30926398_30926483_30928523
ES.10429.72	chr14	-	5323	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	119	117	18	-117	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTCCCAGGTCATGGGT	9440	False	NA	NA	False	NA	NA	NA	30928639	30893003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.73	chr14	-	2030	7	NNC	ENSMUSG00000021910.16	novel	1204	6	NA	NA	-451	134	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	489.150283655238	1187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGCAAGCTCCCACGT	NA	False	NA	NA	False	NA	NA	NA	30896690	30893080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30894136_30894393_30894556_30894840_30894944_30895020_30895150_30895543_30895701_30896212_30896494_30896547
ES.10429.74	chr14	-	5197	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	101	261	0	67	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTCGTTGCTGTTTGC	9422	False	NA	NA	False	NA	NA	NA	30928657	30893147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.75	chr14	-	2038	16	NNC	ENSMUSG00000021910.16	novel	2415	11	NA	NA	0	1575	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	262.563736177629	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTGCTACTTTTTGT	9422	False	NA	NA	False	NA	NA	NA	30928657	30901231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30901523_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.76	chr14	-	5527	13	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	127	10028	26	-108	5prime_fragment	FALSE	canonical	3	931	junction_2	79.5558853189938	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGGTATCATGTTTG	9448	False	NA	NA	False	NA	NA	NA	30928631	30902914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.77	chr14	-	4523	12	NIC	ENSMUSG00000021910.16	novel	2780	14	NA	NA	4	-4	intron_retention	FALSE	canonical	3	935	junction_7	78.4282585267402	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCACATCTTTTTC	9426	False	NA	-1	True	AATAAA	-16	NA	30928653	30905273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.78	chr14	-	5308	11	NIC	ENSMUSG00000021910.16	novel	2780	14	NA	NA	0	-4	intron_retention	FALSE	canonical	3	57	junction_1	302.461650461674	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCACATCTTTTTC	9422	False	NA	-1	True	AATAAA	-16	NA	30928657	30905273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30906355_30906898_30907008_30907268_30908845_30909015_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.79	chr14	-	2735	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	41	4	16	-4	multi-exon	FALSE	canonical	3	57	junction_1	267.283529621824	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCACATCTTTTTC	9337	False	NA	-1	True	AATAAA	-16	NA	30928742	30905273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.8	chr14	-	5548	21	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	223.150061617737	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9338	False	NA	-4	True	AATAAA	-17	NA	30928741	30892886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896850_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.80	chr14	-	3181	13	ISM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	112	12389	11	-6	5prime_fragment	FALSE	canonical	3	931	junction_2	79.5558853189938	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGCACATCTTTT	9433	False	NA	-3	True	AATAAA	-14	NA	30928646	30905275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.81	chr14	-	3955	13	NIC	ENSMUSG00000021910.16	novel	2780	14	NA	NA	26	-6	intron_retention	FALSE	canonical	3	57	junction_1	278.169113230703	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGCACATCTTTT	9448	False	NA	-3	True	AATAAA	-14	NA	30928631	30905275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30906355_30906898_30907008_30907268_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.82	chr14	-	3850	13	NIC	ENSMUSG00000021910.16	novel	2780	14	NA	NA	24	-10	intron_retention	FALSE	canonical	1	3	junction_4	380.926684401197	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGTGTGTGCACATC	9446	False	NA	-7	True	AATAAA	-10	NA	30928633	30905279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30906355_30906898_30907008_30907268_30908845_30909015_30909099_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.83	chr14	-	3002	9	NIC	ENSMUSG00000021910.16	novel	2415	11	NA	NA	8	19	intron_retention	FALSE	canonical	3	935	junction_4	86.1915562859843	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGGAGGGAAAAAGA	9430	False	NA	NA	False	NA	NA	NA	30928649	30907627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.84	chr14	-	2804	10	NIC	ENSMUSG00000021910.16	novel	2415	11	NA	NA	27	11	intron_retention	FALSE	canonical	3	935	junction_5	81.6298480873598	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAAGGAGG	9449	False	NA	NA	False	NA	NA	NA	30928630	30907635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30908845_30909015_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.85	chr14	-	2408	11	FSM	ENSMUSG00000021910.16	ENSMUST00000165981.8	2415	11	18	-11	18	11	multi-exon	FALSE	canonical	3	935	junction_6	81.5207948930824	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAAGGAGG	9440	False	NA	NA	False	NA	NA	NA	30928639	30907635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.86	chr14	-	1268	8	ISM	ENSMUSG00000021910.16	ENSMUST00000164989.8	2276	11	6	2601	6	13	5prime_fragment	FALSE	canonical	3	935	junction_3	91.9329835771023	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATTAAATTGCAAA	9428	False	NA	NA	False	NA	NA	NA	30928651	30910283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ES.10429.87	chr14	-	589	4	NNC	ENSMUSG00000021910.16	novel	1763	3	NA	NA	18	5524	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	532.482863574031	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAACTCTCTGTGTTTT	9440	False	NA	NA	False	ATTAAA	-15	NA	30928639	30917376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30917583_30925183_30925367_30926398_30926483_30928523
ES.10429.88	chr14	-	3661	2	FSM	ENSMUSG00000021910.16	ENSMUST00000164617.2	3716	2	24	31	24	-31	multi-exon	FALSE	canonical	3	1229	junction_1	0	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGAAGAATGAAACCTGA	9446	False	NA	NA	False	AATAAA	-22	NA	30928633	30922931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30926483_30928523
ES.1043.1	chr1	+	2693	2	FSM	ENSMUSG00000026271.16	ENSMUST00000169198.3	4214	2	174	1347	174	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTGCCTATGGTTC	NA	False	NA	NA	False	NA	NA	NA	92906817	92912766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_92907024_92910279
ES.10430.1	chr14	+	1710	1	Antisense	novelGene_ENSMUSG00000021902.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTTTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	30962301	30964011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_30962300_30964000
ES.10431.1	chr14	-	1837	9	FSM	ENSMUSG00000021902.8	ENSMUST00000228930.2	1382	9	-333	-122	-24	0	multi-exon	FALSE	canonical	0	0	junction_3	10.3892973775901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGAATTGGCTCT	NA	False	NA	3	True	AATAAA	-20	NA	30973298	30959645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ES.10431.2	chr14	-	1998	10	NIC	ENSMUSG00000021902.8	novel	1809	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	9.89325746202314	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	False	NA	-4	True	AATAAA	-13	NA	30973280	30959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962967_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ES.10431.3	chr14	-	1660	8	NIC	ENSMUSG00000021902.8	novel	1809	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	11.0951359079701	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	False	NA	-4	True	AATAAA	-13	NA	30973253	30959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30960111_30960293_30960440_30961587_30961695_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ES.10431.4	chr14	-	739	4	NNC	ENSMUSG00000021902.8	novel	1809	11	NA	NA	-184	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0724477007517	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	False	NA	-4	True	AATAAA	-13	NA	30962135	30959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_30960111_30960293_30960440_30961587_30961695_30962107
ES.10431.5	chr14	-	2103	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	-20	1	-20	0	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	False	NA	-4	True	AATAAA	-13	NA	30973294	30959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ES.10431.6	chr14	-	1828	9	NIC	ENSMUSG00000021902.8	novel	2084	11	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.61769203083567	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	False	NA	-4	True	AATAAA	-13	NA	30973282	30959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_30960111_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ES.10431.7	chr14	-	6213	1	Genic_Genomic	ENSMUSG00000021902.8	novel	NA	NA	NA	NA	-23	4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCATTGTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	30973297	30967084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_30967100_30973300
ES.10431.8	chr14	-	2639	1	Genic_Genomic	ENSMUSG00000021902.8	novel	NA	NA	NA	NA	-6	-3553	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGTTTTAATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	30973280	30970641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_30970600_30973300
ES.10432.1	chr14	+	3405	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	98.1559465531763	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973419	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30974991_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.12	chr14	+	3921	15	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-22	-9	intron_retention	FALSE	canonical	3	13	junction_10	100.516853089927	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973437	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.13	chr14	+	3468	16	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	13	junction_11	97.1540815177394	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTTGCTATCTCGA	NA	False	NA	11	True	AATAAA	-18	NA	30973442	30981887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.15	chr14	+	3069	17	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	94.0883062606613	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973445	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.16	chr14	+	3086	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	96.4245171105357	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973445	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979557_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.17	chr14	+	3499	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	305	junction_11	28.5467258289905	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCTGGTTGCTATCTC	NA	False	NA	9	True	AATAAA	-16	NA	30973446	30981885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.18	chr14	+	3144	15	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-13	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	104.206134019773	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973446	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.19	chr14	+	3765	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	305	junction_11	32.9635488920043	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATCTTCTGGTTGCTA	NA	False	NA	5	True	AATAAA	-12	NA	30973446	30981881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.2	chr14	+	3437	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	23	0	23	0	multi-exon	FALSE	canonical	3	305	junction_12	31.9899886683318	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973429	30981901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.20	chr14	+	3411	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	98.0385566690473	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973446	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980496_30980662
ES.10432.21	chr14	+	4772	15	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	305	junction_10	33.1400860910537	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973447	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.22	chr14	+	3459	17	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-10	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	98.0738720302202	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973449	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975598_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.23	chr14	+	3523	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	305	junction_11	32.6737407306438	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTTGCTATCTCGA	NA	False	NA	11	True	AATAAA	-18	NA	30973449	30981887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.24	chr14	+	3522	16	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-10	-9	intron_retention	FALSE	canonical	0	0	junction_15	100.630589561801	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973449	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980496_30980662
ES.10432.25	chr14	+	3821	15	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	13	junction_10	100.303824168658	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973453	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.27	chr14	+	3379	16	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.0588032197461	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973456	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973834_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.28	chr14	+	6468	8	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	365	junction_6	23.2668635354126	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973456	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30976052_30976123_30976597_30977042_30980334_30980414_30980488_30980662
ES.10432.29	chr14	+	3365	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	98.0588032197461	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973456	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.3	chr14	+	3206	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_12	93.8549204557225	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973429	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979461_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.32	chr14	+	3412	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	98.1580358401695	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973457	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977451_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.33	chr14	+	3850	14	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_9	107.601720141988	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973458	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30978067_30978749_30979245_30979725_30979837_30980334_30980414_30980488_30980662
ES.10432.34	chr14	+	3523	18	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.658000674841	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973458	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974076_30974207_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.35	chr14	+	4128	15	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	1	-3	intron_retention	FALSE	canonical	3	339	junction_7	26.4181446613296	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973460	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30979725_30979837_30980334_30980414_30980488_30980662
ES.10432.37	chr14	+	3252	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	99.6108874013724	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTTGCTATCTCGA	NA	False	NA	11	True	AATAAA	-18	NA	30973467	30981887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.38	chr14	+	3990	13	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_11	111.448885892442	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973467	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978620_30978749_30979245
ES.10432.4	chr14	+	3913	15	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	23	-3	intron_retention	FALSE	canonical	3	305	junction_11	31.875715278089	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973429	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30980334_30980414_30980488_30980662
ES.10432.40	chr14	+	3776	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	305	junction_11	32.3247411264018	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973468	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.41	chr14	+	4956	12	NNC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	1	-3	intron_retention	TRUE	canonical	1	7	junction_5	113.909925267205	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973468	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976128_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30979725_30979837_30980488_30980662
ES.10432.42	chr14	+	3986	14	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	2	-9	intron_retention	FALSE	canonical	0	0	junction_8	107.758001940684	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973469	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30978067_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.43	chr14	+	5005	11	NNC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	9	-9	intron_retention	FALSE	canonical	0	0	junction_3	117.458928992223	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973476	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_30973737_30973856_30973912_30974884_30975533_30975991_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30979999_30980240_30980334_30980414
ES.10432.45	chr14	+	4180	13	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	374	-8	intron_retention	FALSE	canonical	3	13	junction_8	104.329472772026	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGATCTTCTGGTTGC	NA	False	NA	3	True	AATAAA	-10	NA	30973910	30981879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.46	chr14	+	4349	12	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	998	-9	intron_retention	FALSE	canonical	3	305	junction_7	31.1896359137094	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30974534	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.47	chr14	+	4864	8	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	1831	-9	intron_retention	FALSE	canonical	3	362	junction_4	19.1897081259508	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30975367	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30975533_30975989_30976052_30976123_30976597_30977042_30977167_30977469_30979725_30979837_30980334_30980414_30980488_30980662
ES.10432.5	chr14	+	4392	14	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	26	-3	intron_retention	FALSE	canonical	3	339	junction_7	26.9485593691204	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973432	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.6	chr14	+	3315	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-24	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	100.580978983769	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGATCTTCTGGTTG	NA	False	NA	2	True	AATAAA	-9	NA	30973435	30981878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980414_30980488_30980662
ES.10432.7	chr14	+	4304	15	NIC	ENSMUSG00000021901.11	novel	3855	16	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	339	junction_6	25.2558338380886	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973437	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.8	chr14	+	3911	16	FSM	ENSMUSG00000021901.11	ENSMUST00000190788.7	3855	16	-57	1	-22	-1	multi-exon	FALSE	canonical	3	339	junction_7	25.7505986985416	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGGTTGCTATCTCG	NA	False	NA	10	True	AATAAA	-17	NA	30973437	30981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10432.9	chr14	+	3350	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	-22	-3	combination_of_known_splicesites	FALSE	canonical	3	41	junction_5	90.8951532750173	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGGTTGCTATCT	NA	False	NA	8	True	AATAAA	-15	NA	30973437	30981884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ES.10433.1	chr14	-	3498	20	ISM	ENSMUSG00000019027.9	ENSMUST00000048603.8	12872	78	54369	14	-16	-14	3prime_fragment	FALSE	canonical	0	0	junction_4	1.18391809254758	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTCCTGTTGTACCGT	9865	False	NA	NA	False	ATTAAA	-9	NA	30991484	30982345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_30982505_30983002_30983238_30983445_30983798_30984109_30984241_30984369_30984541_30985075_30985253_30985324_30985505_30985806_30985978_30986271_30986404_30986479_30986639_30986867_30987013_30987219_30987417_30987835_30987988_30988271_30988468_30988596_30988823_30989411_30989573_30989668_30989819_30989942_30990063_30990741_30990868_30991326
ES.10434.1	chr14	+	3651	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	3	-6	3	4	multi-exon	FALSE	canonical	3	214	junction_6	22.7354348979737	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAATGTCCAGAATTTG	NA	False	NA	21	True	AATAAA	-26	NA	31058597	31093947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.10	chr14	+	6874	20	NIC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	4	-3	intron_retention	FALSE	canonical	3	214	junction_6	22.7963402807097	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTAGTTTAATGTC	NA	False	NA	12	True	AATAAA	-17	NA	31058598	31093938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.11	chr14	+	3797	23	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.6874854220047	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTAGTTTAATGTC	NA	False	NA	12	True	AATAAA	-17	NA	31058598	31093938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31062184_31062278_31062457_31062521_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.12	chr14	+	3727	20	ISM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	4	0	4	0	intron_retention	FALSE	canonical	3	214	junction_6	21.6393250313321	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058598	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658
ES.10434.13	chr14	+	2878	20	ISM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	5	848	5	-848	intron_retention	FALSE	canonical	3	214	junction_6	21.6393250313321	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTGGTGCTCGTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	31058599	31093093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658
ES.10434.15	chr14	+	4819	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	90.7677668558613	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058601	31093943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31062184_31062278_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658
ES.10434.16	chr14	+	3702	22	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	89.91578322276	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACTATGTAGTTTAAT	NA	False	NA	9	True	AATAAA	-14	NA	31058601	31093935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31062457_31062521_31066398_31066561_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.17	chr14	+	2793	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	7	848	7	-848	multi-exon	FALSE	canonical	3	214	junction_6	22.7354348979737	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTGGTGCTCGTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	31058601	31093093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.18	chr14	+	3574	20	NIC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	60.9273669570689	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATGTCCAGA	NA	False	NA	16	True	AATAAA	-21	NA	31058601	31093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.19	chr14	+	3744	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	15	-111	15	109	multi-exon	FALSE	canonical	3	214	junction_6	22.7354348979737	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCACATGAGCTTACTA	NA	False	NA	NA	False	AATAAA	-27	NA	31058609	31094052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.2	chr14	+	9236	16	NIC	ENSMUSG00000021893.15	novel	4662	20	NA	NA	3	-847	intron_retention	FALSE	canonical	3	214	junction_6	21.9721035254555	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGGTGCTCGTTGTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	31058597	31093094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31085581_31086404_31086505_31087412_31087549_31088124_31090159_31091154
ES.10434.20	chr14	+	3602	19	NIC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	16	-4	intron_retention	FALSE	canonical	0	0	junction_1	62.2306541905808	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATGTAGTTTAATGT	NA	False	NA	11	True	AATAAA	-16	NA	31058610	31093937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658
ES.10434.22	chr14	+	3544	21	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	60.0744538052574	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATGTCCAGA	NA	False	NA	16	True	AATAAA	-21	NA	31058621	31093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076118_31077279_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.23	chr14	+	3644	22	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.6178101094525	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATGTCCAGA	NA	False	NA	16	True	AATAAA	-21	NA	31058621	31093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31072506_31072525_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091813_31092658_31092752_31092834
ES.10434.24	chr14	+	3831	22	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_12	86.1583997139562	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058622	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061995_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31082987_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.26	chr14	+	3118	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	28	502	-9	-502	multi-exon	FALSE	canonical	3	214	junction_6	22.7354348979737	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAATTTGAATTTTTCA	NA	False	NA	NA	False	AATGAA	-12	NA	31058622	31093439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.28	chr14	+	3938	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	-1	-851	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	77.0099181923991	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGAGTCTGGTGCTCGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	31058630	31093090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062278_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.3	chr14	+	4722	20	FSM	ENSMUSG00000021893.15	ENSMUST00000152182.2	4662	20	-66	6	3	-6	multi-exon	TRUE	canonical	3	18	junction_12	56.8136868531731	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACTATGTAGTTTAAT	NA	False	NA	9	True	AATAAA	-14	NA	31058597	31093935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658
ES.10434.30	chr14	+	4498	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1021400481206	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058643	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069715_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.31	chr14	+	3502	20	NIC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	59.8224056822078	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTAGTTTAATGTC	NA	False	NA	12	True	AATAAA	-17	NA	31058644	31093938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092834
ES.10434.32	chr14	+	6714	19	NIC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	-14	-3	intron_retention	FALSE	canonical	0	0	junction_1	63.3228061426354	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTAGTTTAATGTC	NA	False	NA	12	True	AATAAA	-17	NA	31058649	31093938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.36	chr14	+	3591	21	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.1094626494032	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATGTCCAGA	NA	False	NA	16	True	AATAAA	-21	NA	31058658	31093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062107_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.37	chr14	+	5084	22	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	100.976816449705	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATGTCCAGA	NA	False	NA	16	True	AATAAA	-21	NA	31058659	31093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062521_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31079128_31079209_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.38	chr14	+	3513	21	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	58.4863231875624	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058666	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087486_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.39	chr14	+	9306	16	NIC	ENSMUSG00000021893.15	novel	4662	20	NA	NA	5	-6	intron_retention	FALSE	canonical	3	214	junction_6	20.4119790537049	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACTATGTAGTTTAAT	NA	False	NA	9	True	AATAAA	-14	NA	31058668	31093935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31085581_31086404_31086505_31087412_31088201_31090012_31091218_31091677
ES.10434.4	chr14	+	3657	21	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.982497447172	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058597	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066569_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.41	chr14	+	3441	20	NIC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	7	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	60.9753140186058	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATGTAGTTTAATGT	NA	False	NA	11	True	AATAAA	-16	NA	31058670	31093937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.42	chr14	+	5602	13	NIC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	13149	0	intron_retention	FALSE	canonical	3	214	junction_1	22.2928737990915	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31071812	31093943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31091218_31091677_31091809_31092658
ES.10434.43	chr14	+	1701	15	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	-13121	-847	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	68.1027135423893	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGGTGCTCGTTGTGG	2230	False	NA	NA	False	ATTAAA	-17	NA	31074391	31093094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087486_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.5	chr14	+	3625	21	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	60.1103984348798	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTAGTTTAATGTC	NA	False	NA	12	True	AATAAA	-17	NA	31058597	31093938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090029_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.6	chr14	+	3542	20	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.4232570654056	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058597	31093943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31066398_31066561_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.7	chr14	+	3800	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	4	-850	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	89.7200646455407	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGAGTCTGGTGCTCGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	31058598	31093091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066561_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092754_31092834
ES.10434.8	chr14	+	3740	22	NNC	ENSMUSG00000021893.15	novel	3648	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	87.9530899499616	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058598	31093943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069619_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31090958_31091058_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10434.9	chr14	+	4644	21	FSM	ENSMUSG00000021893.15	ENSMUST00000143472.8	4613	21	-33	2	4	0	multi-exon	FALSE	canonical	3	18	junction_12	56.4505092979683	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058598	31093941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ES.10435.1	chr14	-	2571	8	NIC	ENSMUSG00000021892.15	novel	2684	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3.06394436993246	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAAGTCCACTGTTGT	5892	False	NA	NA	False	AATAAA	-26	NA	31158038	31095741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31156039_31156103_31157767
ES.10435.2	chr14	-	774	3	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	40073	1118	29781	-1118	3prime_fragment	FALSE	canonical	3	7	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAATAGTATGCATTT	NA	False	NA	NA	False	NA	NA	NA	31099561	31096859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_31097159_31097560_31097822_31099347
ES.10436.1	chr14	+	2384	1	Intergenic	novelGene_8749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAATTTGAACATTGAG	NA	False	NA	NA	False	NA	NA	NA	31192176	31194560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31192200_31194600
ES.10437.1	chr14	+	5857	2	Antisense	novelGene_ENSMUSG00000021891.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAACAATGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	31198920	31212537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_31201768_31209527
ES.10438.1	chr14	-	1528	7	NNC	ENSMUSG00000021891.9	novel	2388	5	NA	NA	2	9135	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	131.38926473989	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACGTGTAGGAGTGTTT	NA	False	NA	NA	False	AAAAAG	-15	NA	31216985	31186399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31186842_31187293_31187437_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.11	chr14	-	1981	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	-9	1974	-9	791	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31217006	31200750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.12	chr14	-	2069	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	2	791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	132.328400411837	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216976	31200750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216604_31216723_31216858
ES.10438.13	chr14	-	2113	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	791	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	123.583642391162	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216987	31200750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31214414_31215553_31215922_31216858
ES.10438.14	chr14	-	1827	5	FSM	ENSMUSG00000021891.9	ENSMUST00000227595.2	1027	5	-9	-791	0	791	multi-exon	FALSE	canonical	3	12	junction_3	105.354164606816	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216987	31200750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31215553_31215922_31216858
ES.10438.15	chr14	-	1829	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-47	-989	1	791	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGTGAATGTGTTTGT	NA	False	NA	0	True	NA	NA	NA	31216996	31200750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.16	chr14	-	3082	5	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	-5	788	intron_retention	FALSE	canonical	3	247	junction_4	13.3603892158874	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACCGGGTGAATGTGTT	NA	False	NA	-3	True	NA	NA	NA	31216970	31200753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31215922_31216858
ES.10438.18	chr14	-	5862	4	NIC	ENSMUSG00000021891.9	novel	2388	5	NA	NA	1	581	intron_retention	FALSE	canonical	3	247	junction_3	13.5728487143349	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAACAGAATTGTAAGT	NA	False	NA	-8	True	AATAAA	-22	NA	31216977	31200960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31204890_31209527_31209699_31214278_31215922_31216858
ES.10438.19	chr14	-	2890	5	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	2	581	intron_retention	FALSE	canonical	3	247	junction_4	13.3603892158874	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAACAGAATTGTAAGT	NA	False	NA	-8	True	AATAAA	-22	NA	31216985	31200960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31215922_31216858
ES.10438.2	chr14	-	2776	6	FSM	ENSMUSG00000021891.9	ENSMUST00000227777.2	2762	6	-10	-4	3	4	multi-exon	FALSE	canonical	0	0	junction_1	112.925816357465	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGCTTATGTGTATGG	NA	False	NA	NA	False	NA	NA	NA	31216975	31195530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31197374_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.20	chr14	-	1760	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	1	2185	1	580	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAACAGAATTGTAAG	NA	False	NA	-9	True	AATAAA	-21	NA	31216996	31200961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.21	chr14	-	1625	5	FSM	ENSMUSG00000021891.9	ENSMUST00000227595.2	1027	5	-18	-580	1	580	multi-exon	FALSE	canonical	3	12	junction_3	105.354164606816	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAACAGAATTGTAAG	NA	False	NA	-9	True	AATAAA	-21	NA	31216996	31200961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31215553_31215922_31216858
ES.10438.22	chr14	-	2471	4	NNC	ENSMUSG00000021891.9	novel	1027	5	NA	NA	-175	574	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	121.114271110661	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACTGTAGAAAAACAGAAT	NA	False	NA	-15	True	AATAAA	-15	NA	31215826	31200967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214468
ES.10438.25	chr14	-	1590	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-28	-769	1	571	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCACACTGTAGAAAAACAG	NA	False	NA	-18	True	AATAAA	-12	NA	31216977	31200970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.26	chr14	-	1162	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	19	2765	0	0	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCATGTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31216978	31201541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.27	chr14	-	2185	5	NIC	ENSMUSG00000021891.9	novel	2388	5	NA	NA	0	3	intron_retention	FALSE	canonical	3	3	junction_1	113.91306992615	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCTTTATATGTATGC	NA	False	NA	NA	False	NA	NA	NA	31216978	31203301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31203411_31204747_31204890_31209527_31209699_31214278_31215922_31216858
ES.10438.28	chr14	-	1041	6	NIC	ENSMUSG00000021891.9	novel	2388	5	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	111.748646524242	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCTTTATATGTATGC	NA	False	NA	NA	False	NA	NA	NA	31216974	31203301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31203411_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.29	chr14	-	2385	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	2	1	2	0	multi-exon	FALSE	canonical	3	247	junction_4	24.3823706804732	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACCTCTTTATATGT	NA	False	NA	NA	False	NA	NA	NA	31216985	31203305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.3	chr14	-	2128	6	FSM	ENSMUSG00000021891.9	ENSMUST00000227777.2	2762	6	-10	644	3	-644	multi-exon	FALSE	canonical	0	0	junction_1	112.925816357465	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATGCCTACAGCT	NA	False	NA	NA	False	NA	NA	NA	31216975	31196178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31197374_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.30	chr14	-	2146	6	NNC	ENSMUSG00000021891.9	novel	2388	5	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.925816357465	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGACCTCTTTATAT	NA	False	NA	NA	False	NA	NA	NA	31216981	31203307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31204515_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.4	chr14	-	1184	6	NNC	ENSMUSG00000021891.9	novel	2762	6	NA	NA	1	-644	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	112.533372827797	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATGCCTACAGCT	NA	False	NA	NA	False	NA	NA	NA	31216986	31196178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31196419_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.5	chr14	-	3937	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	12	-3	2	3	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTTGATGTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	31216985	31198773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.6	chr14	-	6912	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	1	-4525	1	-3	multi-exon	FALSE	canonical	3	247	junction_4	24.3823706804732	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTGTTTCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	31216986	31198779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.7	chr14	-	4605	2	NNC	ENSMUSG00000021891.9	novel	1027	5	NA	NA	-1248	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTGTTTCTTGATGT	946	False	NA	NA	False	NA	NA	NA	31205852	31198779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31202864_31205331
ES.10438.8	chr14	-	3307	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	4	635	4	-635	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTTCGTGCGTTATTG	NA	False	NA	NA	False	NA	NA	NA	31216993	31199411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ES.10438.9	chr14	-	3260	6	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	-3	793	intron_retention	FALSE	canonical	2	9	junction_4	119.332476719458	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216992	31200748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31215922_31216858
ES.10439.1	chr14	+	4071	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	674	173	-123	-173	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTCTTGTTTTATTTT	6276	False	NA	NA	False	AATAAA	-21	NA	31217029	31231642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.10	chr14	+	1164	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	740	3014	-57	-308	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGAAATCTCTTTTATT	6342	False	NA	NA	False	NA	NA	NA	31217095	31228801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.11	chr14	+	3931	7	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-57	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.1816857133762	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTTAATGTCTTGTT	6342	False	NA	NA	False	AATAAA	-14	NA	31217095	31231635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527_31230123_31230189
ES.10439.12	chr14	+	8046	4	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-45	-176	intron_retention	FALSE	canonical	3	223	junction_3	19.2006944318862	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATGTCTTGTTTTAT	6354	False	NA	NA	False	AATAAA	-18	NA	31217107	31231639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31217329_31219665_31219761_31222076_31224411_31226243
ES.10439.13	chr14	+	8219	4	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-41	1	intron_retention	FALSE	canonical	3	223	junction_3	19.2006944318862	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATC	6358	False	NA	NA	False	NA	NA	NA	31217111	31231816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31217329_31219665_31219761_31222076_31224411_31226243
ES.10439.14	chr14	+	1746	7	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-27	539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.1816857133762	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGTCACTAGTCAGG	6372	False	NA	NA	False	AATAAA	-12	NA	31217125	31229648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527_31228703_31228937
ES.10439.16	chr14	+	3814	6	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-20	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.6477471745	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6379	False	NA	NA	False	AATAAA	-19	NA	31217132	31231640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217167_31219655_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.18	chr14	+	10595	3	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	10	-175	intron_retention	FALSE	canonical	3	223	junction_1	18	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6409	False	NA	NA	False	AATAAA	-19	NA	31217162	31231640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31224411_31226243_31226478_31228527
ES.10439.19	chr14	+	7060	4	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	1534	-180	intron_retention	FALSE	canonical	3	223	junction_2	18.8384948679264	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTTAATGTCTTGTT	828	False	NA	NA	False	AATAAA	-14	NA	31218686	31231635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.2	chr14	+	4267	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	675	-24	-122	24	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATAAGTCTAATGCAT	6277	False	NA	NA	False	AAAAAG	-8	NA	31217030	31231839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.4	chr14	+	6044	5	NIC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-90	-173	intron_retention	FALSE	canonical	3	223	junction_3	17.0788612032536	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTCTTGTTTTATTTT	6309	False	NA	NA	False	AATAAA	-21	NA	31217062	31231642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31217329_31219665_31219761_31222076_31224411_31226243_31226478_31228527
ES.10439.5	chr14	+	4027	6	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-69	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.016421668003	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTAATGTCTTGTTT	6330	False	NA	NA	False	AATAAA	-15	NA	31217083	31231636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217349_31219665_31219761_31222080_31222214_31224219_31224411_31226243_31226478_31228527
ES.10439.6	chr14	+	3914	5	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-68	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.527774822066	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTAATGTCTTGTTTT	6331	False	NA	NA	False	AATAAA	-16	NA	31217084	31231637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217329_31222076_31222214_31224219_31224411_31226245_31226478_31228527
ES.10439.7	chr14	+	6055	5	ISM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	738	175	-59	-175	intron_retention	FALSE	canonical	3	223	junction_4	18.0138835346518	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6340	False	NA	NA	False	AATAAA	-19	NA	31217093	31231640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243
ES.10439.8	chr14	+	4014	7	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-59	6702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	124.004928217479	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATGGGGGCTGGAGAG	6340	False	NA	NA	False	TATAAA	-9	NA	31217093	31238517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226245_31226478_31228527_31231637_31238502
ES.10439.9	chr14	+	3929	6	NNC	ENSMUSG00000021890.7	novel	4918	6	NA	NA	-58	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	102.049791768528	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTCTTGTTTTATT	6341	False	NA	NA	False	AATAAA	-19	NA	31217094	31231640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31217329_31219665_31219747_31222137_31222214_31224219_31224411_31226243_31226478_31228527
ES.1044.1	chr1	-	8286	1	Genic_Genomic	ENSMUSG00000100021.2	novel	NA	NA	NA	NA	2141	7051	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTGCTTGTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	92928352	92920066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_92920100_92928400
ES.10440.1	chr14	+	3528	1	Antisense	novelGene_ENSMUSG00000021884.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCCAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	31320771	31324299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_31320800_31324300
ES.10441.1	chr14	+	1917	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	13	394	13	-394	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGCAGAATACTGGCT	NA	False	NA	3	True	AATAAA	-19	NA	31363026	31390142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
ES.10441.2	chr14	+	178	1	Intergenic	novelGene_8751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	31366056	31366234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31366100_31366200
ES.10442.10	chr14	-	3835	1	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	5	-1477	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	6950	False	NA	NA	False	NA	NA	NA	31362916	31359081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31359100_31362900
ES.10442.2	chr14	-	6726	15	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	-12	114	intron_retention	FALSE	canonical	0	0	junction_14	13.9941678814382	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGTTTTGTTTTGTT	6640	False	NA	NA	False	AGTAAA	-30	NA	31363226	31329811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31352085_31352917_31352996_31354852_31356237_31357700_31357742_31362450_31362556_31363122
ES.10442.3	chr14	-	2263	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-275	656	18	114	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGTTTTGTTTTGTT	6670	False	NA	NA	False	AGTAAA	-30	NA	31363196	31329811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ES.10442.4	chr14	-	2175	15	NIC	ENSMUSG00000021884.19	novel	1699	16	NA	NA	8	109	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.7716434482347	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAACTTTGGTTTTGTT	6631	False	NA	NA	False	AGTAAA	-25	NA	31363235	31329816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31362450_31362556_31362745
ES.10442.5	chr14	-	4005	1	NIC	ENSMUSG00000115022.2	novel	1739	16	NA	NA	21681	-62288	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTTAGTACGGTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	31341154	31337149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31337100_31341200
ES.10442.6	chr14	-	1403	13	NIC	ENSMUSG00000021884.19	novel	2644	17	NA	NA	-3	-8210	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	14.8405881135336	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCATTTACTTTATGTA	6649	False	NA	NA	False	CATAAA	-26	NA	31363217	31338177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31363122
ES.10442.7	chr14	-	2442	8	ISM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	56	17405	3	1822	5prime_fragment	FALSE	canonical	3	46	junction_3	2.77010277566647	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTGTTGTTTGGT	7001	False	NA	NA	False	ACTAAA	-18	NA	31362865	31346560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ES.10442.8	chr14	-	1286	8	ISM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-316	18933	6	294	5prime_fragment	FALSE	canonical	3	46	junction_3	2.77010277566647	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAGACTTTGGAAAAT	6629	False	NA	NA	False	AGTAAA	-14	NA	31363237	31348088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ES.10442.9	chr14	-	214	1	Intergenic	novelGene_8750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGAAGTAGCTGAAGTGA	NA	False	NA	NA	False	GATAAA	-10	NA	31358737	31358523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31358500_31358700
ES.10443.1	chr14	+	3022	2	Intergenic	novelGene_8753	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTACCATATCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	31411773	31415220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31412209_31412633
ES.10444.1	chr14	-	3158	2	Intergenic	novelGene_8752	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	3470	False	NA	NA	False	NA	NA	NA	31414202	31410619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31412205_31412629
ES.10445.1	chr14	-	6780	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-68	0	-68	0	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5212	False	NA	NA	False	AATAAA	-19	NA	31552676	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.10	chr14	-	5690	21	NNC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	1991	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	40.0594558125794	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	9778	False	NA	NA	False	AATAAA	-19	NA	31462795	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31462613
ES.10445.11	chr14	-	4922	18	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.954325130424	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5263	False	NA	NA	False	AATAAA	-19	NA	31552625	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31423672_31441308_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.13	chr14	-	6221	24	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-31	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	49.6866932470084	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAAGTGTCTTTCT	5249	False	NA	NA	False	AATAAA	-13	NA	31552639	31420730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31477689_31477761_31486210_31486290_31552283
ES.10445.14	chr14	-	4943	32	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	61.4637444633398	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAAGTGTCTTTCT	5272	False	NA	NA	False	AATAAA	-13	NA	31552616	31420730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31527083_31527211_31538036_31538143_31539171_31539295_31552283
ES.10445.15	chr14	-	5225	29	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-52	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3428096030096	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAAGTGTCTTTCT	5228	False	NA	NA	False	AATAAA	-13	NA	31552660	31420730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31422433_31423965_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.16	chr14	-	6521	28	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-82	-7	combination_of_known_junctions	FALSE	canonical	3	5	junction_19	34.102162336053	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCAAGTGTCTTTC	5471	False	NA	NA	False	AATAAA	-12	NA	31552417	31420731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.17	chr14	-	6673	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-52	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	35.5259093717021	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCAAGTGTCTTTC	5228	False	NA	NA	False	AATAAA	-12	NA	31552660	31420731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31552283
ES.10445.18	chr14	-	5049	20	NNC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	5989	-7	intron_retention	FALSE	canonical	3	11	junction_1	38.8241293449136	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCAAGTGTCTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	31458797	31420731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928
ES.10445.2	chr14	-	8391	28	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_10	44.734639024691	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5241	False	NA	NA	False	AATAAA	-19	NA	31552647	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433335_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.20	chr14	-	4611	29	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-31	-12	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	43.419333486457	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGTAAAAAATCAAGTGT	5249	False	NA	NA	False	AATAAA	-7	NA	31552639	31420736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.21	chr14	-	5767	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-51	996	-51	-996	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATACCATATGTGTG	5229	False	NA	NA	False	AAAAAG	-19	NA	31552659	31421720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.23	chr14	-	5610	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-43	1145	-43	-1145	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATCTCCATCTTTTC	5237	False	NA	NA	False	NA	NA	NA	31552651	31421869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.24	chr14	-	4592	22	NNC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	-2029	-1244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.8316326246113	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTATCTGTGCATA	5353	False	NA	NA	False	AATAAA	-31	NA	31467220	31421968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429309_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177
ES.10445.25	chr14	-	5731	30	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-29	-1244	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	51.9016952428764	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTATCTGTGCATA	5251	False	NA	NA	False	AATAAA	-31	NA	31552637	31421968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31538036_31538148_31539171_31539295_31552283
ES.10445.28	chr14	-	5554	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-89	1247	-89	-1247	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATTTGTATCTGTGC	5191	False	NA	NA	False	AATAAA	-28	NA	31552697	31421971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.3	chr14	-	6970	30	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	51.8037777695889	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5251	False	NA	NA	False	AATAAA	-19	NA	31552637	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31538036_31538143_31539171_31539295_31552283
ES.10445.30	chr14	-	5510	28	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-29	-1247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	34.9680630304106	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATTTGTATCTGTGC	5251	False	NA	NA	False	AATAAA	-28	NA	31552637	31421971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486306_31500878_31500963_31552283
ES.10445.31	chr14	-	5518	30	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-85	-1247	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	57.9944849565418	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATTTGTATCTGTGC	5468	False	NA	NA	False	AATAAA	-28	NA	31552420	31421971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31538036_31538148_31539171_31539295_31552283
ES.10445.32	chr14	-	5358	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	23	-1247	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	35.5259093717021	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATTTGTATCTGTGC	5303	False	NA	NA	False	AATAAA	-28	NA	31552585	31421971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31552283
ES.10445.33	chr14	-	5145	1	NIC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	2542	-1249	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTATTTGTATCTGT	9080	False	NA	NA	False	AATAAA	-26	NA	31427118	31421973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31422000_31427100
ES.10445.35	chr14	-	6423	23	NIC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	-1239	-1249	intron_retention	FALSE	canonical	3	136	junction_10	16.4606342325818	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTATTTGTATCTGT	1927	False	NA	NA	False	AATAAA	-26	NA	31470646	31421973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599
ES.10445.36	chr14	-	5556	29	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-26	-1249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.2726857103549	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTATTTGTATCTGT	5254	False	NA	NA	False	AATAAA	-26	NA	31552634	31421973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433335_31433403_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.38	chr14	-	5472	27	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-8	-1250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.5573750869904	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTATTTGTATCTG	5272	False	NA	NA	False	AATAAA	-25	NA	31552616	31421974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31443773_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.4	chr14	-	4659	29	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.5250884326395	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5206	False	NA	NA	False	AATAAA	-19	NA	31552682	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31421683_31423809_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.40	chr14	-	5416	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-31	-1256	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	35.2117222614201	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGAATAATGTATTTG	5249	False	NA	NA	False	AATAAA	-19	NA	31552639	31421980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31486210_31486290_31500878_31500963_31552283
ES.10445.42	chr14	-	5188	27	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-35	-1259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	35.4819105507491	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAATGAATAATGTAT	5245	False	NA	NA	False	AATAAA	-16	NA	31552643	31421983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31467264_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.43	chr14	-	5155	26	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	6	-1259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	36.0662945144078	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAATGAATAATGTAT	5286	False	NA	NA	False	AATAAA	-16	NA	31552602	31421983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465332_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.44	chr14	-	6538	27	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-32	-1412	intron_retention	FALSE	non_canonical	0	0	junction_7	35.2449585131224	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCTATTTGATAATTT	5248	False	NA	NA	False	TATAAA	-23	NA	31552640	31422136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432707_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.45	chr14	-	5330	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-32	1414	-32	-1414	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATCTATTTGATAAT	5248	False	NA	NA	False	TATAAA	-21	NA	31552640	31422138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.46	chr14	-	4413	22	NIC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	-2092	-1421	combination_of_known_junctions	FALSE	canonical	3	5	junction_19	38.2672307905988	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTATTTTGATCTATT	5290	False	NA	NA	False	TATAAA	-14	NA	31467283	31422145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177
ES.10445.47	chr14	-	5247	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-42	-1423	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	35.5259093717021	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACAGTATTTTGATCTA	5238	False	NA	NA	False	TATAAA	-12	NA	31552650	31422147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31552283
ES.10445.48	chr14	-	3772	25	NNC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	-1362	-1429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.8973802141381	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACAGAACAGTATTTT	1804	False	NA	NA	False	TATAAA	-6	NA	31470769	31422153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31422564_31423484_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599
ES.10445.49	chr14	-	4825	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-31	1918	-31	1160	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCAGATGTTTTCTTT	5249	False	NA	NA	False	NA	NA	NA	31552639	31422642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.5	chr14	-	6265	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	35.4819105507491	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5514	False	NA	NA	False	AATAAA	-19	NA	31552374	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.50	chr14	-	4382	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	173	2157	-100	921	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTACCTGCTTCCTC	5453	False	NA	NA	False	AAGAAA	-7	NA	31552435	31422881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.51	chr14	-	3920	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	-52	2844	-52	234	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTATGTACACATCAAAT	5228	False	NA	NA	False	AATAAA	-16	NA	31552660	31423568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.52	chr14	-	1522	1	Intergenic	novelGene_8754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGTTTATCTTAATGG	8048	False	NA	NA	False	NA	NA	NA	31464525	31463003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31463000_31464500
ES.10445.53	chr14	-	1262	1	Intergenic	novelGene_8755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAACATGAT	NA	False	NA	NA	False	NA	NA	NA	31508051	31506789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31506800_31508100
ES.10445.54	chr14	-	3209	1	Intergenic	novelGene_8756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTTTATCAGCTGAG	7301	False	NA	NA	False	NA	NA	NA	31522330	31519121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31519100_31522300
ES.10445.55	chr14	-	4190	1	Genic_Genomic	ENSMUSG00000014496.9	novel	NA	NA	NA	NA	-28	-49389	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAAATTACTTAGACCA	5252	False	NA	NA	False	NA	NA	NA	31552636	31548446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_31548400_31552600
ES.10445.6	chr14	-	6415	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	35.2117222614201	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5506	False	NA	NA	False	AATAAA	-19	NA	31552382	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31486210_31486290_31500878_31500963_31552283
ES.10445.7	chr14	-	8351	28	NNC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-29	0	intron_retention	FALSE	non_canonical	0	0	junction_1	34.9460882064472	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5251	False	NA	NA	False	AATAAA	-19	NA	31552637	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31423775_31423837_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ES.10445.8	chr14	-	6701	27	NIC	ENSMUSG00000014496.9	novel	6712	28	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	46.145720438551	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5227	False	NA	NA	False	AATAAA	-19	NA	31552661	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458709_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31486210_31486290_31500878_31500963_31552283
ES.10445.9	chr14	-	6215	26	NNC	ENSMUSG00000014496.9	novel	6616	28	NA	NA	16070	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	36.1524328365326	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	8743	False	NA	NA	False	AATAAA	-19	NA	31486280	31420724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470722_31477689_31477761_31486210
ES.10446.1	chr14	+	2673	1	Intergenic	novelGene_8757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACCCATGAGCCCAT	NA	False	NA	NA	False	AATAAA	-13	NA	31552857	31555530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31552900_31555500
ES.10447.1	chr14	+	99	2	Intergenic	novelGene_8758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTAGTGTCGTCACT	6476	False	NA	NA	False	NA	NA	NA	31582003	31588980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31582036_31588913
ES.10448.1	chr14	+	3719	2	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	17492	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTGATGTCACCTT	4910	False	NA	NA	False	AATAAA	-28	NA	31645976	31653688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31646028_31650020
ES.10448.2	chr14	+	1248	6	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	23061	12309	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1.46969384566991	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTTCATCACGTGTC	NA	False	NA	NA	False	NA	NA	NA	31651545	31665982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31651667_31654187_31654314_31662356_31662492_31662576_31662765_31665088_31665134_31665349
ES.10448.3	chr14	+	3255	9	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	23080	14686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.11763429326218	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGATGTTTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	31651564	31668359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31651667_31654187_31654314_31662356_31662492_31662576_31662765_31663984_31664150_31664874_31664976_31665088_31665134_31665349_31665949_31666565
ES.10448.4	chr14	+	2987	7	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	23082	14686	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGATGTTTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	31651566	31668359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31651667_31654187_31654314_31662356_31662492_31662576_31662765_31665088_31665134_31665349_31665949_31666565
ES.10448.5	chr14	+	3486	6	NNC	ENSMUSG00000046005.5	novel	3897	2	NA	NA	23845	15115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.24499443206436	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCCTTTTTCCTTGGG	NA	False	NA	NA	False	GATAAA	-13	NA	31652329	31668788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31652545_31654187_31654314_31662356_31662492_31662576_31662765_31665349_31665949_31666565
ES.10449.1	chr14	-	166	1	Intergenic	novelGene_8759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTGTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	31800912	31800746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31800700_31800900
ES.1045.1	chr1	-	8229	46	NNC	ENSMUSG00000014602.16	novel	5391	47	NA	NA	-12	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	3.60630449335125	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTATGTCTCTGTCTGT	NA	False	NA	-2	True	AATAAA	-23	NA	93029581	92943179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990300_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ES.1045.3	chr1	-	5422	46	NNC	ENSMUSG00000014602.16	novel	5391	47	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	3.47946356018664	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTGCGTGTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	93029597	92946000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ES.1045.4	chr1	-	5439	46	NNC	ENSMUSG00000014602.16	novel	5391	47	NA	NA	1172	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	3.61232458243842	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTGCGTGTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	93028372	92946000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971308_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93028244
ES.1045.7	chr1	-	5722	47	NNC	ENSMUSG00000014602.16	novel	6141	49	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	3.6444016677732	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTGTGCGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	93029616	92946002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92979120_92979404_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ES.1045.8	chr1	-	5403	46	NNC	ENSMUSG00000014602.16	novel	5391	47	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	3.61232458243842	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTGTGCGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	93029584	92946002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993904_92994773_92994857_92996206_92996303_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ES.10450.1	chr14	+	2157	9	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	64.0858798800485	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807307	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31807524_31807805_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ES.10450.10	chr14	+	1814	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-6	-95	combination_of_known_junctions	FALSE	canonical	2	23	junction_5	70.5948486297777	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGAATACTTCTTTAA	NA	False	NA	14	True	ATTAAA	-19	NA	31807776	31825064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821405_31821589_31822942_31823052_31824213
ES.10450.11	chr14	+	1559	6	NNC	ENSMUSG00000021906.15	novel	4086	5	NA	NA	9	-824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	113.607394125559	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCCTGCAGATTTAGC	NA	False	NA	NA	False	NA	NA	NA	31807799	31820633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31808011_31813577_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31819737
ES.10450.12	chr14	+	1907	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	78.6555393952074	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTTTAATGTTTCA	NA	False	NA	19	True	AATACA	-18	NA	31807868	31825158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822911_31823052_31824213
ES.10450.13	chr14	+	175	1	Intergenic	novelGene_8760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31809743	31809918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31809700_31809900
ES.10450.14	chr14	+	3690	3	ISM	ENSMUSG00000021906.15	ENSMUST00000170519.8	821	5	1599	-548	1536	1	3prime_fragment	FALSE	canonical	3	171	junction_1	14	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31818954	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31821589_31822942_31823052_31824213
ES.10450.2	chr14	+	1913	9	NNC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-21	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.8121560110528	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCTTTAAATTATTG	NA	False	NA	21	True	ATTAAA	-26	NA	31807309	31825071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31807524_31807958_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ES.10450.3	chr14	+	5413	6	NNC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-3	-81	intron_retention	TRUE	non_canonical	0	0	junction_1	91.6414753264045	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGACTCCTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	31807327	31824531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31807520_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31823052_31824213
ES.10450.4	chr14	+	6533	6	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-3	1	intron_retention	FALSE	canonical	3	199	junction_5	17.9555005499708	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807327	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31823052_31824213
ES.10450.5	chr14	+	2407	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	-30	-1	7	1	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807339	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ES.10450.6	chr14	+	1881	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	74.5727969223116	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807720	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821490_31821589_31822942_31823052_31824213
ES.10450.7	chr14	+	1738	7	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	81.7851181790156	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807765	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31822942_31823052_31824213
ES.10450.8	chr14	+	1997	9	NNC	ENSMUSG00000021906.15	novel	1864	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.696341900742	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTAATGTTTCAGT	NA	False	NA	21	True	AATACA	-20	NA	31807767	31825160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821490_31821589_31822445_31822609_31822942_31823052_31824213
ES.10450.9	chr14	+	1349	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	399	628	1	-81	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGACTCCTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	31807768	31824531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ES.10451.1	chr14	-	3108	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	-104	-51	16	48	multi-exon	FALSE	canonical	3	570	junction_1	6	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGTTTTGGTGTCAT	NA	False	NA	45	True	ACTAAA	-9	NA	31807670	31802474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31805204_31806863_31806939_31807366
ES.10451.2	chr14	-	2853	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	148	-2192	28	0	multi-exon	FALSE	canonical	3	69	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTTCTTGAAGCTT	NA	False	NA	-3	True	AATAAA	-16	NA	31807538	31802522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31805204_31807366
ES.10451.3	chr14	-	3731	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	5	-3250	5	-877	multi-exon	FALSE	canonical	3	582	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGAAGTGTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	31807561	31803402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31806939_31807366
ES.10451.4	chr14	-	4089	1	NIC	ENSMUSG00000021905.15	novel	1057	4	NA	NA	3	-949	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGGTTTGAATTAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	31807563	31803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31803500_31807600
ES.10451.5	chr14	-	715	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	-21	2259	-21	44	multi-exon	FALSE	canonical	3	570	junction_1	6	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTGTGTATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	31807587	31804784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31805204_31806863_31806939_31807366
ES.10451.6	chr14	-	2304	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	4	-1822	4	2	multi-exon	FALSE	canonical	3	582	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGTGTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31807562	31804830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31806939_31807366
ES.10451.8	chr14	-	2719	1	NIC	ENSMUSG00000021905.15	novel	1057	4	NA	NA	17	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGTGTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31807549	31804830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31804800_31807500
ES.10451.9	chr14	-	572	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	121	116	1	2	multi-exon	FALSE	canonical	3	69	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGAGTGTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	31807565	31804830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31805204_31807366
ES.10452.1	chr14	-	182	1	Intergenic	novelGene_8761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGATTCTGG	NA	False	NA	NA	False	NA	NA	NA	31810509	31810327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31810300_31810500
ES.10453.1	chr14	-	174	1	Intergenic	novelGene_8762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	7082	False	NA	NA	False	NA	NA	NA	31823611	31823437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31823400_31823600
ES.10454.1	chr14	+	3053	1	Intergenic	novelGene_8763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTAACTACCAGATTTG	NA	False	NA	NA	False	NA	NA	NA	31826733	31829786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31826700_31829800
ES.10455.1	chr14	+	4023	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	-490	532	-490	76	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTAAACTACACATATAT	NA	False	NA	74	True	AATAAA	-15	NA	31881331	31901280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.11	chr14	+	2139	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	73	1853	0	74	multi-exon	FALSE	canonical	3	533	junction_6	51.0289194210886	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAGGCTTCAAGTGGA	NA	False	NA	NA	False	AGTAAA	-30	NA	31881894	31899959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.13	chr14	+	4321	9	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	2	420	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	203.686608236771	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGGAGAGTAAGTGG	NA	False	NA	NA	False	AATAAA	-11	NA	31881896	31902232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.14	chr14	+	1440	5	Fusion	ENSMUSG00000021911.17_ENSMUSG00000056234.16	novel	791	7	NA	NA	5	-3	multi-exon	FALSE	canonical	0	0	junction_1	191.735983842366	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31881899	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_31881968_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.16	chr14	+	4142	10	NNC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.967954489109	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTGTGTTTGTGTTA	NA	False	NA	-1	True	ATTAAA	-14	NA	31881966	31901205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31882797_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.17	chr14	+	4251	10	NNC	ENSMUSG00000056234.16	novel	443	4	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.967954489109	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCAGTTGTGTTTGTG	NA	False	NA	-4	True	ATTAAA	-11	NA	31881969	31901202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31882912_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.18	chr14	+	3909	1	FSM	ENSMUSG00000056234.16	ENSMUST00000228143.2	4733	1	843	-19	773	19	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTTAAAGAACTCGTG	NA	False	NA	NA	False	AGTAAA	-33	NA	31882710	31886619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31882700_31886600
ES.10455.19	chr14	+	7583	11	NNC	ENSMUSG00000056234.16	novel	3343	10	NA	NA	1644	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	248.435182693595	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTGTGTTTGTGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	31883581	31901204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31887780_31888153_31888228_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.20	chr14	+	7422	10	NIC	ENSMUSG00000056234.16	novel	3343	10	NA	NA	2185	6	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	197.137540505463	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTGTGTTATCTGT	NA	False	NA	4	True	ATTAAA	-19	NA	31884122	31901210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31888228_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.21	chr14	+	160	1	Intergenic	novelGene_8764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	31886911	31887071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31886900_31887100
ES.10455.22	chr14	+	3766	10	FSM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	-420	-3	-218	3	multi-exon	FALSE	canonical	1	1	junction_1	198.662813783171	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTGTTTGTGTTATC	NA	False	NA	1	True	ATTAAA	-16	NA	31887327	31901207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31887780_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.25	chr14	+	3905	9	NIC	ENSMUSG00000056234.16	novel	443	4	NA	NA	53	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	203.697040663334	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTTTGTGTTATCTG	NA	False	NA	3	True	ATTAAA	-18	NA	31887801	31901209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31888228_31892704_31892860_31894259_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.26	chr14	+	3312	9	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	4956	0	-2	0	3prime_fragment	FALSE	canonical	3	533	junction_5	50.457283914218	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTGTGTTTGTGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	31892703	31901204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.27	chr14	+	4009	7	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	1496	5	intron_retention	FALSE	canonical	3	559	junction_5	42.2561632585512	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTTTGTGTTATCTG	NA	False	NA	3	True	ATTAAA	-18	NA	31894310	31901209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31894401_31894563_31894653_31894845_31894955_31895357_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.28	chr14	+	4120	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	-23	316	-23	14	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTATTCATACATATA	NA	False	NA	29	True	AATAAA	-42	NA	31923882	32019191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.29	chr14	+	3832	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-23	6	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACTTATATTTTATTCA	NA	False	NA	21	True	AATAAA	-34	NA	31923882	32019183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.30	chr14	+	4424	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	-13	2	-13	1	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTTAGATGCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	31923892	32019505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.31	chr14	+	4136	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGCTTTTGTTAGATG	NA	False	NA	NA	False	AATAAA	-17	NA	31923896	32019501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.32	chr14	+	4109	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	20	junction_2	123.492375400293	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923899	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.34	chr14	+	4516	15	ISM	ENSMUSG00000021911.17	ENSMUST00000163350.8	3374	17	1	18991	1	13875	5prime_fragment	FALSE	canonical	3	299	junction_1	53.9200560921406	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGATCTAAATTTGAT	NA	False	NA	NA	False	NA	NA	NA	31923906	31998615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806
ES.10455.36	chr14	+	3993	17	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	130.907827783521	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923908	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.37	chr14	+	3408	15	ISM	ENSMUSG00000021911.17	ENSMUST00000163350.8	3374	17	3	20097	3	12769	5prime_fragment	FALSE	canonical	3	299	junction_1	53.9200560921406	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATTCTATTCTGTA	NA	False	NA	NA	False	AATATA	-17	NA	31923908	31997509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806
ES.10455.38	chr14	+	4378	15	ISM	ENSMUSG00000021911.17	ENSMUST00000163350.8	3374	17	3	19127	3	13739	5prime_fragment	FALSE	canonical	3	299	junction_1	53.9200560921406	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATAAGTTTCCCATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	31923908	31998479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806
ES.10455.41	chr14	+	3871	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	6	536	6	-206	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCAAGAGCGTTGGGGTT	NA	False	NA	NA	False	AATAAA	-32	NA	31923911	32018971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.42	chr14	+	1732	7	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	164.976176731336	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923911	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_32019094
ES.10455.43	chr14	+	3817	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	20	junction_2	134.888086381826	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923911	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.44	chr14	+	3889	16	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	65	junction_13	103.111374520736	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923911	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_32006055_32006162_32017155_32017285_32018146
ES.10455.45	chr14	+	3665	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.326921969073	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923915	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924018_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.46	chr14	+	2673	9	NIC	ENSMUSG00000021911.17	novel	3013	9	NA	NA	10	-70	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	161.314134532594	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACTTTCCAAATGAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	31923915	31964982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145
ES.10455.47	chr14	+	3844	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	157.889485103261	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923915	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976300_31976352_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.49	chr14	+	5579	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	10	-1176	10	1176	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTGTTTTCCTGGAG	NA	False	NA	NA	False	AATAAA	-32	NA	31923915	32020683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.5	chr14	+	4429	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	58	-422	12	422	multi-exon	FALSE	canonical	3	533	junction_6	51.0289194210886	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGAGAGTAAGTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	31881879	31902234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.50	chr14	+	4142	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	141.023988853311	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923915	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_31998641_31998714_32006055_32006162_32017155_32017285_32018146
ES.10455.51	chr14	+	5368	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	10	1163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	123.470294323157	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTGTTGGAAATGCT	NA	False	NA	NA	False	AATAAA	-19	NA	31923915	32020670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146_32019321_32019518
ES.10455.52	chr14	+	6483	14	ISM	ENSMUSG00000021911.17	ENSMUST00000163350.8	3374	17	10	20156	10	12710	intron_retention	FALSE	canonical	3	299	junction_1	55.7320300329858	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGTTCAAATCTTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	31923915	31997450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586
ES.10455.53	chr14	+	3844	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	171.245482953854	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923916	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939339_31939396_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996915_32006055_32006162_32017155_32017285_32018146
ES.10455.54	chr14	+	3642	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	124.963551779535	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923916	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31923993_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.56	chr14	+	4300	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	151.116217233992	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923919	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31933085_31933320_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.59	chr14	+	3903	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.631821811958	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCACTTATATTTTAT	NA	False	NA	18	True	AATAAA	-31	NA	31923919	32019180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31925630_31925742_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.6	chr14	+	3588	9	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	533	junction_5	54.1057991346584	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCAGTTGTGTTTGTG	NA	False	NA	-4	True	ATTAAA	-11	NA	31881881	31901202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.60	chr14	+	4243	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-8	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	123.470294323157	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGGGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	31923919	32019549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146_32019321_32019518
ES.10455.61	chr14	+	4125	19	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	150.881688586181	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923919	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939339_31939396_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.62	chr14	+	7023	14	NIC	ENSMUSG00000021911.17	novel	3374	17	NA	NA	-8	-16392	combination_of_known_splicesites	TRUE	canonical	1	1	junction_13	124.349669226285	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAGGAGGAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	31923919	32001214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31996806
ES.10455.63	chr14	+	5284	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-8	1165	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTTGGAAATGCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	31923919	32020672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.64	chr14	+	3710	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.468255558157	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923921	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932488_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.66	chr14	+	4042	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	120.901973504289	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	31923922	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964166_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.67	chr14	+	3980	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-5	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	174.328647986068	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCATTTGTCAGAAA	NA	False	NA	-5	True	AATAAA	-8	NA	31923922	32019157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931591_31932411_31932596_31936280_31936404_31936523_31936612_31939640_31939687_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.69	chr14	+	4064	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	142.10557019197	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCATGCCACTTATATT	NA	False	NA	14	True	AATAAA	-27	NA	31923922	32019176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996895_32006055_32006162_32017155_32017285_32018146
ES.10455.7	chr14	+	3756	8	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	3	533	junction_4	51.4833042086937	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTTTGTGTTATCTG	NA	False	NA	3	True	ATTAAA	-18	NA	31881883	31901209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31881968_31892704_31892860_31894259_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ES.10455.70	chr14	+	3565	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-3	-219	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAAGCCAGGTTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	31923924	32018958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.72	chr14	+	4178	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	149.224745573105	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCACTTATATTTTATT	NA	False	NA	19	True	AATAAA	-32	NA	31923925	32019181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31925630_31925742_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.73	chr14	+	6627	14	NIC	ENSMUSG00000021911.17	novel	3374	17	NA	NA	-2	16433	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	138.769571891104	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	31923925	32001173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31993586_31993666_31996806
ES.10455.74	chr14	+	3309	15	NIC	ENSMUSG00000021911.17	novel	3374	17	NA	NA	-1	12711	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	179.978867807148	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGTTCAAATCTTCACT	NA	False	NA	NA	False	ATTAAA	-16	NA	31923926	31997451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939339_31939396_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31996806
ES.10455.76	chr14	+	3933	17	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	155.568199975927	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923927	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924423_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.79	chr14	+	3049	15	NIC	ENSMUSG00000021911.17	novel	3374	17	NA	NA	1	12710	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	85.1357859000334	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGTTCAAATCTTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	31923928	31997450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806
ES.10455.81	chr14	+	3170	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	134.148445967725	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCACTTATATTTTAT	NA	False	NA	18	True	AATAAA	-31	NA	31923935	32019180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146_32018290_32018895
ES.10455.83	chr14	+	4337	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	110.877375453892	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923936	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32005770_32006162_32017155_32017285_32018146
ES.10455.84	chr14	+	5364	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	123.877772106804	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCCCATGCCACTTA	NA	False	NA	10	True	AATAAA	-23	NA	31923938	32019172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31925742_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.85	chr14	+	5061	19	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	14	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	134.148445967725	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCCTGTTGGAAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	31923941	32020669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146_32019321_32019518
ES.10455.87	chr14	+	3285	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	37	1091	15	115	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCAGTCTCTTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	31923942	32018416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.88	chr14	+	2905	9	FSM	ENSMUSG00000021911.17	ENSMUST00000164137.8	3013	9	38	70	16	-70	multi-exon	FALSE	canonical	3	299	junction_1	64.7586866759974	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACTTTCCAAATGAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	31923943	31964982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145
ES.10455.89	chr14	+	3851	18	NNC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	18	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.382235796935	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGAAACTCCCATGC	NA	False	NA	4	True	AATAAA	-17	NA	31923945	32019166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31924423_31930113_31930181_31930648_31931431_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.9	chr14	+	2917	6	NNC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.023088347415	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCAGTTGTGTTTGTG	NA	False	NA	-4	True	ATTAAA	-11	NA	31881884	31901202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31881968_31892704_31892860_31894259_31894378_31897915_31898913_31899189_31899331_31899779
ES.10455.90	chr14	+	3559	17	ISM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	6207	338	5720	-8	3prime_fragment	FALSE	canonical	1	134	junction_14	81.96776710238	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAAACTCCCATGCCAC	484	False	NA	7	True	AATAAA	-20	NA	31930112	32019169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.91	chr14	+	3040	15	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	-5310	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	136.828881662984	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	1417	False	NA	12	True	AATAAA	-25	NA	31931045	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.92	chr14	+	2300	14	NNC	ENSMUSG00000021911.17	novel	2894	15	NA	NA	179	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	172.97600476613	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCCCATGCCACTTA	6906	False	NA	10	True	AATAAA	-23	NA	31936534	32019172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976264_31976352_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.93	chr14	+	2127	12	ISM	ENSMUSG00000021911.17	ENSMUST00000170129.8	2786	15	15626	20	3259	-20	3prime_fragment	FALSE	canonical	1	134	junction_9	96.5941496782601	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCATTTGTCAGAAA	9986	False	NA	-5	True	AATAAA	-8	NA	31939614	32019157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.94	chr14	+	4980	1	Intergenic	novelGene_8766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	31947026	31952006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_31947000_31952000
ES.10455.95	chr14	+	3746	5	ISM	ENSMUSG00000021911.17	ENSMUST00000170129.8	2786	15	67301	5	-6374	-5	3prime_fragment	FALSE	canonical	1	134	junction_2	131.694722749243	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCCCATGCCACTTA	NA	False	NA	10	True	AATAAA	-23	NA	31991289	32019172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ES.10455.96	chr14	+	4954	3	ISM	ENSMUSG00000021911.17	ENSMUST00000170129.8	2786	15	78376	3	4701	-3	3prime_fragment	FALSE	canonical	3	433	junction_1	5.5	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCCATGCCACTTATA	NA	False	NA	12	True	AATAAA	-25	NA	32002364	32019174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32006162_32017155_32017285_32018146
ES.10455.97	chr14	+	10190	2	ISM	ENSMUSG00000021911.17	ENSMUST00000171871.2	587	5	10462	-876	10462	0	3prime_fragment	FALSE	canonical	3	444	junction_1	0	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	32008125	32019177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32017285_32018146
ES.10455.98	chr14	+	1680	1	Intergenic	novelGene_8767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	559	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTCAATGACTTGATAT	NA	False	NA	NA	False	AAGAAA	-7	NA	32013183	32014863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_32013200_32014900
ES.10455.99	chr14	+	4605	1	Genic_Genomic	ENSMUSG00000021911.17	novel	NA	NA	NA	NA	19979	2740	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32017642	32022247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_32017600_32022200
ES.10456.1	chr14	-	2218	10	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTCGCGATAGGATGG	NA	False	NA	NA	False	NA	NA	NA	31900024	31881880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31881966_31892702_31892858_31894257_31894400_31894562_31894651_31894843_31894955_31895357_31895446_31896344_31896489_31897893_31898910_31899186_31899329_31899777
ES.10456.10	chr14	-	2834	6	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	31900027	31894046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894400_31894562_31894955_31895357_31895446_31896344_31896489_31897893_31898910_31899186
ES.10456.11	chr14	-	5575	2	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	31900024	31894046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894955_31895357
ES.10456.12	chr14	-	6783	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	20	-5630	1	5630	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTCTCTGAAGTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	31923835	31896488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.13	chr14	-	5978	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	9	-4814	9	4814	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTTGGACCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	31923846	31897304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.14	chr14	-	4349	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	14	-3190	-5	3190	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTCTACTCACCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	31923841	31898928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.15	chr14	-	3013	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	32	-1872	3	1872	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTTGTGTGAAATATT	NA	False	NA	NA	False	AATATA	-17	NA	31923823	31900246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.16	chr14	-	3164	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	3717	junction_3	323.099736923446	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTATCTCCATTTAATAA	NA	False	NA	NA	False	AATAAA	-41	NA	31923843	31902117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31911100_31911212_31913298_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.17	chr14	-	1197	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	-28	4	-28	-4	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTATCTCCATTT	NA	False	NA	NA	False	AATAAA	-36	NA	31923883	31902122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.18	chr14	-	1145	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1620.99120053818	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGTATCTCCATTT	NA	False	NA	NA	False	AATAAA	-36	NA	31923819	31902122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915457_31915810_31915905_31920925_31920985_31923599
ES.10456.2	chr14	-	4702	5	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894400_31894562_31894955_31895357_31898910_31899186_31899329_31899777
ES.10456.20	chr14	-	1244	8	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1892.69480705503	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATAGTATCTCCATT	NA	False	NA	NA	False	AATAAA	-35	NA	31923850	31902123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31902628_31903663_31903745_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.21	chr14	-	894	4	FSM	ENSMUSG00000013701.14	ENSMUST00000170331.8	777	4	7	-124	7	-5	multi-exon	FALSE	canonical	3	72	junction_2	1998.03753718492	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATAGTATCTCCATT	NA	False	NA	NA	False	AATAAA	-35	NA	31923819	31902123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31920925_31920985_31923599
ES.10456.22	chr14	-	1093	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-4	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	1674.27851924344	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACATAGTATCTCCAT	NA	False	NA	NA	False	AATAAA	-34	NA	31923840	31902124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31923599
ES.10456.24	chr14	-	1085	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	2	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1620.99120053818	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTCATAATTCCAACATA	NA	False	NA	NA	False	AATAAA	-17	NA	31923834	31902141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915401_31915810_31915905_31920925_31920985_31923599
ES.10456.25	chr14	-	3747	6	ISM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	16	25	-3	-25	intron_retention	FALSE	canonical	3	3717	junction_4	320.088362800024	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGTCATAATTCCAACA	NA	False	NA	NA	False	AATAAA	-15	NA	31923839	31902143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925
ES.10456.26	chr14	-	5242	5	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-5	-25	intron_retention	FALSE	canonical	3	3717	junction_2	360.630957489786	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGTCATAATTCCAACA	NA	False	NA	NA	False	AATAAA	-15	NA	31923860	31902143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31911100_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.27	chr14	-	6154	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-7	-28	intron_retention	FALSE	canonical	3	3717	junction_4	262.474074910266	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAAAGTCATAATTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	31923843	31902146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31920985_31923599
ES.10456.28	chr14	-	1036	6	FSM	ENSMUSG00000013701.14	ENSMUST00000163379.2	682	6	-38	-316	-5	27	multi-exon	FALSE	canonical	2	27	junction_4	1693.07502491768	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAAAGTCATAATTCC	NA	False	NA	NA	False	AATAAA	-11	NA	31923841	31902147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31920925_31920985_31923599
ES.10456.29	chr14	-	1073	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-7	27	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	1721.78379595116	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAAAGTCATAATTCC	NA	False	NA	NA	False	AATAAA	-11	NA	31923843	31902147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31911100_31911212_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.3	chr14	-	3287	4	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894955_31895357_31895446_31896344_31896489_31897893
ES.10456.30	chr14	-	1122	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	-3	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1572.23210931324	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAAAGTCATAATTCC	NA	False	NA	NA	False	AATAAA	-11	NA	31923839	31902147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_31902628_31911106_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.32	chr14	-	759	3	NIC	ENSMUSG00000013701.14	novel	777	4	NA	NA	2	22	combination_of_known_splicesites	FALSE	canonical	1	16	junction_1	2027.5	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAGAACCAAAGTCATA	NA	False	NA	NA	False	AATAAA	-6	NA	31923824	31902152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31902628_31920925_31920985_31923599
ES.10456.34	chr14	-	902	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	7	264	7	71	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGATCATGGATGGTTA	NA	False	NA	NA	False	NA	NA	NA	31923848	31902382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.35	chr14	-	3642	6	ISM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	13	5991	-6	5134	5prime_fragment	FALSE	canonical	3	3717	junction_3	293.578609575017	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGTATCATCAATTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	31923842	31908109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ES.10456.36	chr14	-	146	1	Intergenic	novelGene_8765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	31921663	31921517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_31921500_31921700
ES.10456.37	chr14	-	1844	1	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	8	-1223	mono-exon	FALSE	NA	NA	NA	NA	NA	691	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31923847	31922003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_31922000_31923800
ES.10456.4	chr14	-	10009	1	Genic_Genomic	ENSMUSG00000013701.14	novel	NA	NA	NA	NA	9875	8088	mono-exon	FALSE	NA	NA	NA	NA	NA	714	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31904039	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_31894000_31904000
ES.10456.5	chr14	-	2206	8	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894400_31894562_31894651_31894843_31894955_31895357_31895446_31896344_31896491_31897894_31898910_31899186_31899329_31899777
ES.10456.6	chr14	-	2368	7	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894651_31894843_31894955_31895357_31895446_31896344_31896489_31897893_31898910_31899186_31899329_31899777
ES.10456.8	chr14	-	3267	6	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATACCTAACTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	31900024	31894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894651_31894843_31894955_31895357_31896489_31897893_31898910_31899186_31899329_31899777
ES.10456.9	chr14	-	4677	3	Antisense	novelGene_ENSMUSG00000056234.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	31900024	31894045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_31894955_31895357_31895446_31896344
ES.10457.1	chr14	-	5111	3	NNC	ENSMUSG00000090459.2	novel	391	2	NA	NA	-4499	0	intron_retention	FALSE	canonical	0	0	junction_2	21.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCATTGACAAAGTTT	NA	False	NA	-13	True	ATTAAA	-17	NA	32021430	32014880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32015223_32016561_32016786_32016885
ES.10457.2	chr14	-	4078	1	Genic_Genomic	ENSMUSG00000090459.2	novel	NA	NA	NA	NA	-2030	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAAGTCATTGACAAAG	NA	False	NA	-16	True	ATTAAA	-14	NA	32018961	32014883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_32014900_32019000
ES.10458.1	chr14	-	4054	3	NNC	ENSMUSG00000115691.2	novel	1833	2	NA	NA	9042	2158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.5	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGAGTCTTATTTCTT	NA	False	NA	-3	True	ATTAAA	-20	NA	32030900	32023460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32027353_32029146_32029250_32030841
ES.10458.2	chr14	-	2411	1	NIC	ENSMUSG00000115691.2	novel	1833	2	NA	NA	11905	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32028037	32025626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_32025600_32028000
ES.10459.1	chr14	+	3802	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	-76	-3	-76	3	multi-exon	TRUE	canonical	3	463	junction_11	40.4855688541514	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTCCTTTCCTACCG	NA	False	NA	15	True	AATAAA	-21	NA	32043899	32070111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.10	chr14	+	3582	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.656294041667	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043957	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32043983_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.11	chr14	+	3674	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	154.435480315698	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043957	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045846_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066409_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.12	chr14	+	5086	22	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	463	junction_11	41.2709645756772	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043962	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32068811_32069462
ES.10459.13	chr14	+	7093	20	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-13	0	intron_retention	FALSE	canonical	3	463	junction_11	41.7580420041716	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043962	32070108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32066460_32066670_32066743_32066839_32066966_32067066_32068811_32069462
ES.10459.14	chr14	+	3576	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-13	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	114.413786157132	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043962	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32069462
ES.10459.15	chr14	+	3843	22	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-12	1	intron_retention	FALSE	canonical	2	5	junction_1	120.866542469103	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043963	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32043983_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.16	chr14	+	3846	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-12	-9	intron_retention	FALSE	canonical	1	3	junction_5	118.276439393915	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAAGCCCTGCTGGCCT	NA	False	NA	3	True	AATAAA	-9	NA	32043963	32070099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054459_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.17	chr14	+	3824	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	463	junction_11	41.2876675001544	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043966	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.18	chr14	+	3872	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-8	-9	intron_retention	FALSE	canonical	1	8	junction_19	117.192502510306	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAAGCCCTGCTGGCCT	NA	False	NA	3	True	AATAAA	-9	NA	32043967	32070099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066826_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.2	chr14	+	3764	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-57	-5	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	114.227925235433	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043918	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045846_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.22	chr14	+	3789	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	114.037154426933	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043967	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044134_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.23	chr14	+	3550	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	118.297356110819	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043967	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.24	chr14	+	3660	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	116.114968675073	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCCTCCTTTCCT	NA	False	NA	11	True	AATAAA	-17	NA	32043968	32070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.25	chr14	+	3850	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.327213419536	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCCTCCTTTCCT	NA	False	NA	11	True	AATAAA	-17	NA	32043969	32070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32044278_32044401_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.26	chr14	+	4734	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	463	junction_11	40.1243933555233	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043971	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.27	chr14	+	6057	21	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	2	intron_retention	FALSE	canonical	3	463	junction_11	40.5875596704212	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTTCCTACC	NA	False	NA	14	True	AATAAA	-20	NA	32043971	32070110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32068519_32068655_32068811_32069462
ES.10459.28	chr14	+	4809	20	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-5	intron_retention	FALSE	canonical	1	1	junction_16	196.902186158832	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043971	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054459_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066670_32066743_32066839_32066966_32067066_32068811_32069462
ES.10459.29	chr14	+	4665	22	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	13	junction_1	117.773755974631	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043971	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.3	chr14	+	3687	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-54	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	115.755707172092	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043921	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32043983_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.30	chr14	+	3966	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-8	intron_retention	FALSE	canonical	0	0	junction_20	205.794738708625	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAAGCCCTGCTGGCCTC	NA	False	NA	4	True	AATAAA	-10	NA	32043971	32070100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32067446_32067547_32068155_32068235_32068354_32068811_32069462
ES.10459.31	chr14	+	3852	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-8	intron_retention	FALSE	canonical	1	3	junction_5	157.530562428925	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAAGCCCTGCTGGCCTC	NA	False	NA	4	True	AATAAA	-10	NA	32043971	32070100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054459_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066826_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.32	chr14	+	3879	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	152.418352460151	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043971	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32046205_32046363_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.34	chr14	+	4085	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	152.556182729147	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043971	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32064519_32064880_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.35	chr14	+	4697	21	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_16	122.474446314323	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043971	32070108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.36	chr14	+	6923	21	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	463	junction_10	41.5416658308258	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043971	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32068811_32069462
ES.10459.37	chr14	+	3733	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_19	114.937494314274	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGCCCTGCTGGCCTCC	NA	False	NA	5	True	AATAAA	-11	NA	32043971	32070101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066826_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.38	chr14	+	6092	21	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	1	intron_retention	FALSE	canonical	3	463	junction_11	40.9808186838672	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043971	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32068811_32069462
ES.10459.39	chr14	+	4063	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_20	159.686599053757	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32043971	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32067140_32067446_32067547_32068354_32068811_32069462
ES.10459.4	chr14	+	3339	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	-41	425	-41	-94	multi-exon	FALSE	canonical	3	463	junction_11	40.4855688541514	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTTATTTCAGGATTA	NA	False	NA	NA	False	NA	NA	NA	32043934	32069683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.40	chr14	+	4688	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_5	181.476812109243	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043977	32070108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32049600_32050241_32050458_32050649_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.41	chr14	+	4496	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_16	118.036002702075	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043980	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32064519_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.42	chr14	+	4625	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	116.656395263036	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32043982	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32067446_32068519_32068655_32068811_32069462
ES.10459.43	chr14	+	6564	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	8	-2849	8	2849	multi-exon	FALSE	canonical	3	463	junction_11	40.4855688541514	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAGTACATCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	32043983	32072957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.44	chr14	+	4959	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	9	-1245	9	1245	multi-exon	FALSE	canonical	3	463	junction_11	40.4855688541514	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTCTTATTTAAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	32043984	32071353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.45	chr14	+	3806	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	13	-5	intron_retention	FALSE	canonical	3	463	junction_11	40.8649509344626	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043988	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.47	chr14	+	3662	22	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	14	-5	intron_retention	FALSE	canonical	1	1	junction_17	120.698082879905	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043989	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.49	chr14	+	3467	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	16	240	16	91	multi-exon	FALSE	canonical	3	463	junction_11	40.4855688541514	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGAGCCGTATAGGG	NA	False	NA	NA	False	NA	NA	NA	32043991	32069868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.5	chr14	+	4907	22	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-27	-5	intron_retention	FALSE	canonical	1	8	junction_18	118.864716639035	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043948	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066826_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.50	chr14	+	5618	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	116.504103142977	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043994	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32059367_32059463_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.51	chr14	+	4061	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	41	-2	intron_retention	FALSE	canonical	0	0	junction_17	155.871160018522	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32044016	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32065632_32065877_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.52	chr14	+	3774	25	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	44	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	153.425826949051	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32044019	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32067446_32067547_32068354_32068519_32068655_32068811_32069462
ES.10459.53	chr14	+	3501	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	46	-5	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	118.331068344443	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32044021	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.54	chr14	+	4277	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	46	2	intron_retention	FALSE	canonical	0	0	junction_14	159.268394503126	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTTCCTACC	NA	False	NA	14	True	AATAAA	-20	NA	32044021	32070110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062795_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32067547_32068354_32068519_32068655_32068811_32069462
ES.10459.55	chr14	+	3625	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.26966569437	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCCTCCTTTCCT	NA	False	NA	11	True	AATAAA	-17	NA	32044021	32070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066409_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.56	chr14	+	3623	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-1515	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.244661332063	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAAGCCCTGCTGGCCTC	NA	False	NA	4	True	AATAAA	-10	NA	32045833	32070100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062017_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.57	chr14	+	3429	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	468	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.656294041667	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTGGCCTCCTTT	NA	False	NA	8	True	AATAAA	-14	NA	32047816	32070104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066878_32066934_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.58	chr14	+	3210	18	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	7093	-5	intron_retention	FALSE	canonical	3	463	junction_6	45.540886226984	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32054441	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.59	chr14	+	5360	14	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	7422	0	intron_retention	FALSE	canonical	3	463	junction_5	47.3822426978391	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32054770	32070108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32068811_32069462
ES.10459.6	chr14	+	3986	22	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-25	0	intron_retention	FALSE	canonical	3	463	junction_11	41.6864442857412	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043950	32070108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32067140_32068354_32068811_32069462
ES.10459.60	chr14	+	5750	11	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	9826	-7	intron_retention	FALSE	canonical	3	463	junction_3	49.2837701479909	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGCCCTGCTGGCCTCC	NA	False	NA	5	True	AATAAA	-11	NA	32057174	32070101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32057383_32059398_32059579_32059711_32059841_32061163_32062013_32062601_32062705_32063158_32063288_32063996_32065288_32066280_32066460_32066670_32066743_32066839_32068811_32069462
ES.10459.61	chr14	+	2561	15	ISM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	15421	9	12048	-9	3prime_fragment	FALSE	canonical	3	463	junction_2	48.3402587109843	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAAGCCCTGCTGGCCT	NA	False	NA	3	True	AATAAA	-9	NA	32059396	32070099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.62	chr14	+	2356	15	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	12197	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	147.501435482465	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32059545	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068459_32068655_32068811_32069462
ES.10459.63	chr14	+	2075	12	ISM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	17883	5	14510	-5	3prime_fragment	FALSE	canonical	3	496	junction_9	41.6314010540002	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32061858	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ES.10459.64	chr14	+	2820	7	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	16669	-2	intron_retention	FALSE	canonical	3	496	junction_5	54.1902512757907	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32064017	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.65	chr14	+	5643	4	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	16706	-2	intron_retention	FALSE	canonical	3	506	junction_3	24.0739601136904	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTGGCCTCCTTTCC	NA	False	NA	10	True	AATAAA	-16	NA	32064054	32070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32066460_32066670_32066743_32066839_32066966_32067066
ES.10459.66	chr14	+	3750	6	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	16761	1	intron_retention	TRUE	non_canonical	0	0	junction_4	236.785472527349	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCCTTTCCTAC	NA	False	NA	13	True	AATAAA	-19	NA	32064109	32070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32065288_32066280_32066460_32066670_32066743_32066839_32067181_32067477_32068811_32069462
ES.10459.7	chr14	+	3883	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-21	2	intron_retention	FALSE	canonical	3	463	junction_11	41.2351651260815	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTCCTTTCCTACC	NA	False	NA	14	True	AATAAA	-20	NA	32043954	32070110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.10459.8	chr14	+	6670	20	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	463	junction_10	42.7544687528444	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043954	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32068811_32069462
ES.10459.9	chr14	+	3865	23	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	-21	-5	intron_retention	FALSE	canonical	2	13	junction_1	116.489464993816	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTGCTGGCCTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	32043954	32070103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32044074_32045846_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
ES.1046.1	chr1	-	182	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGATGCGTGTAG	1458	False	NA	NA	False	NA	NA	NA	93100408	93100226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93100200_93100400
ES.10460.1	chr14	-	186	1	Intergenic	novelGene_8768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32050453	32050267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_32050300_32050500
ES.10461.1	chr14	-	5547	13	Antisense	novelGene_ENSMUSG00000021913.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCAGATATGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	32065239	32051126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_32053190_32053382_32054240_32054441_32054557_32054702_32054858_32055664_32055811_32057288_32057381_32059396_32059577_32059709_32059838_32061160_32061341_32061856_32062011_32062599_32062702_32063155_32063286_32063994
ES.10461.2	chr14	-	4736	13	Antisense	novelGene_ENSMUSG00000021913.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCAGATATGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	32065239	32051126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_32053190_32053382_32054557_32054702_32054858_32055664_32055813_32057291_32057381_32059396_32059577_32059709_32059838_32061160_32061341_32061856_32062011_32062599_32062702_32063155_32063286_32063994_32064145_32065156
ES.10462.1	chr14	+	216	1	Intergenic	novelGene_8769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTTAAATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	32234981	32235197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_32235000_32235200
ES.10463.1	chr14	+	5962	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-27	1394	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	29.9439476355406	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCCTGTATTGTC	NA	False	NA	8	True	AATAAA	-14	NA	32235450	32300455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.10	chr14	+	5190	17	ISM	ENSMUSG00000054051.8	ENSMUST00000066807.8	8423	21	12625	2492	-9336	1394	3prime_fragment	FALSE	canonical	2	7	junction_7	32.3288159967234	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCCTGTATTGTC	NA	False	NA	8	True	AATAAA	-14	NA	32248102	32300455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.11	chr14	+	2205	7	NIC	ENSMUSG00000054051.8	novel	2899	14	NA	NA	105	2219	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.4477413649119	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTTACTGCGGAGAATG	NA	False	NA	NA	False	GATAAA	-3	NA	32257543	32282714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32257626_32263182_32263312_32268701_32270163_32274531_32274668_32279795_32279967_32280384_32280562_32282665
ES.10463.12	chr14	+	8354	14	NIC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-5552	1394	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	34.4416151199534	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCCTGTATTGTC	NA	False	NA	8	True	AATAAA	-14	NA	32264555	32300455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.13	chr14	+	5129	6	NIC	ENSMUSG00000054051.8	novel	2899	14	NA	NA	13300	1386	intron_retention	FALSE	canonical	2	7	junction_1	5.12249938994628	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATACTGGTTTTTCCT	NA	False	NA	0	True	AATAAA	-6	NA	32287831	32300447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.3	chr14	+	8069	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-13	-371	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	29.9439476355406	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGTGTTCTCATTTATA	NA	False	NA	NA	False	AGTAAA	-17	NA	32235464	32302576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.4	chr14	+	7548	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-13	-723	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	30.4043993527253	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGAGCAACTCTTGGAT	NA	False	NA	NA	False	AATAAA	-41	NA	32235464	32302224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32242950_32248207_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.5	chr14	+	5775	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-9	1394	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	30.4043993527253	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTTCCTGTATTGTC	NA	False	NA	8	True	AATAAA	-14	NA	32235468	32300455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32242950_32248207_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.6	chr14	+	2308	11	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	-9	2219	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	17.48742405273	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTTACTGCGGAGAATG	NA	False	NA	NA	False	GATAAA	-3	NA	32235468	32282714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665
ES.10463.7	chr14	+	6038	22	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	1	1387	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	30.4233917642315	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTTTCCTG	NA	False	NA	1	True	AATAAA	-7	NA	32235478	32300448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238903_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32263871_32263987_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.8	chr14	+	4723	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	1	183	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	29.9439476355406	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGAGGGTTTTTGTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	32235478	32299244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238899_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10463.9	chr14	+	7852	21	NNC	ENSMUSG00000054051.8	novel	8423	21	NA	NA	16	-377	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	30.4891374099039	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCCACGTGTTCTCA	NA	False	NA	NA	False	AGTAAA	-11	NA	32235502	32302570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32235557_32238903_32239336_32240899_32241021_32242904_32242950_32248207_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ES.10464.1	chr14	+	2096	4	NNC	ENSMUSG00000041730.15	novel	1629	8	NA	NA	5815	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTCCTTGTTCTTGCT	1029	False	NA	NA	False	NA	NA	NA	32327729	32352319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32327906_32330032_32330212_32330297_32330411_32350691
ES.10464.2	chr14	+	1925	4	NNC	ENSMUSG00000041730.15	novel	1629	8	NA	NA	7489	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	2703	False	NA	NA	False	NA	NA	NA	32329403	32352273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_32329455_32330032_32330212_32330297_32330411_32350691
ES.10465.1	chr14	-	158	1	Intergenic	novelGene_8770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATTTAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	32338308	32338150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_32338200_32338300
ES.10466.1	chr14	+	5898	2	ISM	ENSMUSG00000041673.13	ENSMUST00000120951.2	1511	5	3699	2	-108	-2	intron_retention	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACTGAAAAGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	32717113	32736110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32717266_32730364
ES.10466.2	chr14	+	2481	3	ISM	ENSMUSG00000041673.13	ENSMUST00000038956.12	2587	4	3776	-1	-107	1	3prime_fragment	FALSE	canonical	3	4	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAACATGGCTTC	NA	False	NA	NA	False	AATAGA	-9	NA	32717114	32737249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32717266_32730364_32731227_32735781
ES.10466.3	chr14	+	2387	2	ISM	ENSMUSG00000041673.13	ENSMUST00000120866.8	1231	3	3880	-1367	13	1367	3prime_fragment	FALSE	canonical	3	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGTCCACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	32717234	32732720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32717266_32730364
ES.10466.4	chr14	+	6924	2	ISM	ENSMUSG00000041673.13	ENSMUST00000038956.12	2587	4	3896	-9	13	9	intron_retention	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTCTGTGTCTA	NA	False	NA	NA	False	AATAGA	-17	NA	32717234	32737257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_32717266_32730364
ES.10467.1	chr14	-	2500	16	NNC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	22805	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	5.63560112144215	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGGTTTCATCTG	NA	False	NA	-1	True	ATTAAA	-36	NA	32722489	32681504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693720_32695492_32695644_32696111_32696325_32697111_32697204_32699046_32699201_32707613_32707724_32708587_32708706_32710842_32710963_32711869_32711913_32722351
ES.10467.2	chr14	-	2610	17	NNC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	-67517	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	5.61248608016091	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGCTTGAGCGTTACC	NA	False	NA	-18	True	ATTAAA	-19	NA	32812811	32681521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693720_32695492_32695644_32696111_32696325_32697111_32697204_32699046_32699201_32707613_32707724_32708587_32708646_32805632_32805762_32809900_32810027_32811809_32811980_32812748
ES.10467.3	chr14	-	10106	62	NIC	ENSMUSG00000051506.18	novel	10158	62	NA	NA	-30	-19	combination_of_known_junctions	TRUE	canonical	0	0	junction_25	4.35430327386669	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTGCTTGAGCGTTAC	NA	False	NA	-19	True	ATTAAA	-18	NA	32907495	32681522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693720_32695492_32695644_32696111_32696325_32697111_32697204_32699046_32699201_32707613_32707724_32708587_32708706_32710842_32710963_32711869_32711913_32740498_32740562_32742201_32742288_32745264_32745386_32750903_32751053_32760513_32760696_32763110_32763163_32764421_32764626_32769202_32769281_32790780_32790918_32792536_32792723_32795418_32795541_32798204_32798444_32800163_32800322_32801853_32801969_32802555_32802760_32805596_32805762_32809900_32810027_32811809_32811980_32812748_32812955_32815196_32815297_32817225_32817318_32817888_32818051_32819739_32819814_32820973_32821127_32822861_32823053_32823459_32823572_32824484_32824631_32825862_32826095_32826349_32826529_32827944_32828167_32829060_32829138_32829577_32829795_32830570_32830666_32831459_32831675_32847800_32847895_32855156_32855735_32862492_32862684_32864284_32864390_32866898_32867352_32868897_32869056_32871438_32871629_32873526_32873717_32874495_32874631_32875966_32876074_32877613_32877729_32884666_32884917_32907329
ES.10467.4	chr14	-	1896	11	NNC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	46128	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.76281181368956	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGGCTGCTTGAGCGTT	8603	False	NA	-21	True	ATTAAA	-16	NA	32699166	32681524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32681962_32682698_32682811_32686495_32686581_32688320_32688504_32689429_32689610_32692779_32692939_32693534_32693699_32695492_32695644_32696111_32696325_32697111_32697204_32699046
ES.10467.6	chr14	-	8020	43	NIC	ENSMUSG00000051506.18	novel	10158	62	NA	NA	-41	-19607	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.46094275777547	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCCAGCCCTGCAATG	NA	False	NA	NA	False	CATAAA	-43	NA	32907506	32759847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_32760696_32763110_32763163_32764421_32764626_32769202_32769281_32790780_32790918_32792536_32792723_32795418_32795541_32798204_32798444_32800163_32800322_32801853_32801969_32802555_32802760_32805596_32805762_32809900_32810027_32811809_32811980_32812748_32812955_32815196_32815297_32817225_32817318_32817888_32818051_32819739_32819814_32820973_32821127_32822861_32823053_32823459_32823572_32824484_32824631_32825862_32826095_32826349_32826529_32827944_32828167_32829060_32829138_32829577_32829795_32830570_32830666_32831459_32831675_32847800_32847895_32855156_32855735_32862492_32862684_32864284_32864390_32866898_32867352_32868897_32869056_32871438_32871629_32873526_32873717_32874495_32874631_32875966_32876074_32877613_32877729_32884666_32884917_32907329
ES.10467.7	chr14	-	3868	13	NIC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	-41	38030	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	1.10554159678513	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATCAGGTGCCTTGTAG	NA	False	NA	NA	False	ATTAAA	-12	NA	32907506	32846675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_32847895_32855156_32855735_32862492_32862684_32864284_32864390_32866898_32867352_32868897_32869056_32871438_32871629_32873526_32873717_32874495_32874631_32875966_32876074_32877613_32877729_32884666_32884917_32907329
ES.10467.8	chr14	-	3699	9	NIC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	-41	19731	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	1.21834929310112	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGTTCTTAATGCTC	NA	False	NA	NA	False	AATAAA	-20	NA	32907506	32864974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_32867352_32868897_32869056_32871438_32871629_32873526_32873717_32874495_32874631_32875966_32876074_32877613_32877729_32884666_32884917_32907329
ES.10467.9	chr14	-	3662	3	NNC	ENSMUSG00000051506.18	novel	9681	59	NA	NA	-4501	-21090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	32911966	32905795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_32906972_32907329_32909756_32911906
ES.10468.1	chr14	-	2883	1	Intergenic	novelGene_8771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCGAAAAATCAAAAGGCTA	NA	False	NA	NA	False	NA	NA	NA	32950254	32947371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_32947400_32950300
ES.10469.1	chr14	+	186	1	Intergenic	novelGene_8772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32971034	32971220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_32971000_32971200
ES.1047.1	chr1	+	3057	6	NNC	ENSMUSG00000084989.4	novel	7132	32	NA	NA	48924	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTAAGGCGTGTGCA	NA	False	NA	NA	False	AATATA	-16	NA	93145370	93158789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93145612_93151281_93151381_93151806_93151933_93154322_93154455_93155253_93155434_93156510
ES.10470.1	chr14	+	2362	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-60	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	5.48839220351387	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCCTGTCACCAGCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33041599	33091890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084481_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ES.10470.2	chr14	+	5519	7	NNC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	-41	1	intron_retention	FALSE	non_canonical	0	0	junction_3	6.09416843292741	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCTGTCACCAGCCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	33041618	33091892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_33041890_33065185_33065315_33081074_33084537_33085231_33085307_33086349_33086472_33088526_33089401_33091306
ES.10470.3	chr14	+	2402	8	NNC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.43333157097012	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCCTGTCACCAGCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33041659	33091890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_33041890_33065185_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ES.10470.4	chr14	+	2314	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCCTGTCACCAGCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33041699	33091890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ES.10470.5	chr14	+	2126	7	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	42	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.42555646998182	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGGCGCCTGTCACC	NA	False	NA	NA	False	ATTAAA	-9	NA	33041701	33091885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33041890_33081074_33081283_33084399_33084481_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ES.10470.6	chr14	+	9827	3	NIC	ENSMUSG00000063506.15	novel	2596	11	NA	NA	-5138	0	intron_retention	FALSE	canonical	3	15	junction_2	0.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCACCAGCCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	33079115	33091891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33085307_33086349_33089401_33091306
ES.10470.7	chr14	+	1966	4	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	146141	1	588	1	3prime_fragment	FALSE	canonical	3	14	junction_2	0.816496580927726	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCCTGTCACCAGCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33084920	33091890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_33085307_33086349_33086472_33088526_33089401_33091306
ES.10471.1	chr14	-	5765	12	NIC	ENSMUSG00000021936.15	novel	5756	12	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.14655787270487	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTTCTTCATTGAAA	NA	False	NA	0	True	AATAAA	-21	NA	33169124	33099854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33104282_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112198_33112271_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
ES.10471.2	chr14	-	1937	1	ISM	ENSMUSG00000021936.15	ENSMUST00000111945.9	5756	12	66909	415	8979	-415	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATACATTACTTTTGT	NA	False	NA	NA	False	AGTAAA	-8	NA	33102206	33100269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_33100300_33102200
ES.10471.3	chr14	-	3526	1	ISM	ENSMUSG00000021936.15	ENSMUST00000111945.9	5756	12	65011	724	7081	-724	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTACCTCACACTGATT	8152	False	NA	NA	False	ATTAAA	-13	NA	33104104	33100578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_33100600_33104100
ES.10471.4	chr14	-	1356	1	ISM	ENSMUSG00000021936.15	ENSMUST00000111945.9	5756	12	65007	2898	7077	253	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTCTGAAATGATGTC	8148	False	NA	-15	True	AGTAAA	-17	NA	33104108	33102752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_33102800_33104100
ES.10472.1	chr14	-	130	1	Intergenic	novelGene_8773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	33251814	33251684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_33251700_33251800
ES.10473.1	chr14	+	2006	4	NIC	ENSMUSG00000021940.11	novel	3153	12	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCCTGGAGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	33311174	33362709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33311247_33354862_33355079_33360276_33360340_33361054
ES.10473.2	chr14	+	3058	12	NNC	ENSMUSG00000021940.11	novel	3153	12	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16661368869327	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATTGCCTGGAGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	33311203	33362706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_33311247_33322448_33322714_33325064_33325146_33326890_33327042_33329489_33329585_33329855_33329967_33334252_33334351_33336389_33336524_33344438_33344588_33354862_33355079_33360276_33360340_33361054
ES.10473.3	chr14	+	4901	3	NIC	ENSMUSG00000021940.11	novel	1467	11	NA	NA	6440	-4	intron_retention	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTGCCTGGAGTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	33333338	33362707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_33336524_33360276_33360340_33361054
ES.10474.1	chr14	+	5164	1	Intergenic	novelGene_8774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTTGCAGCGTCGT	NA	False	NA	NA	False	NA	NA	NA	33704128	33709292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_33704100_33709300
ES.10475.1	chr14	+	1330	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	-12	562	-12	-12	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAAAGAAGCTTGCAG	NA	False	NA	NA	False	NA	NA	NA	33807925	33821966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ES.10475.2	chr14	+	1861	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	12	7	12	-7	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAGTGTCTGTGGATT	NA	False	NA	NA	False	CATAAA	-12	NA	33807949	33822521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ES.10476.1	chr14	+	2720	1	Intergenic	novelGene_8775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGTTTGGTCACTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	33825234	33827954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_33825200_33828000
ES.10477.1	chr14	-	3573	2	FSM	ENSMUSG00000048337.4	ENSMUST00000052164.4	3627	2	-34	88	-34	-88	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTGTTTTTGGGACT	NA	False	NA	NA	False	AATAAA	-14	NA	33874480	33866036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33869346_33874216
ES.10478.1	chr14	+	552	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	-14	-70	-14	70	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTACTTCATGATTA	2260	False	NA	NA	False	AATATA	-38	NA	33892597	33893149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_33892600_33893100
ES.10479.1	chr14	-	3433	1	ISM	ENSMUSG00000071531.4	ENSMUST00000226613.2	10354	2	12512	1	12512	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTGTTTATTTAAG	NA	False	NA	0	True	AATAAA	-16	NA	33911078	33907645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_33907600_33911100
ES.1048.1	chr1	+	2116	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	20	8179	20	-8179	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGTTGCAGTCATTT	NA	False	NA	60	True	NA	NA	NA	93270595	93293032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.11	chr1	+	3599	9	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-16	-5875	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	212.049190932199	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAATCTGATAGACTT	NA	False	NA	14	True	AATAAA	-16	NA	93271360	93295336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93271434_93273877_93274010_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.13	chr1	+	3595	11	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-10	-5881	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	197.651713880755	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTTGTAGAATCTGAT	NA	False	NA	8	True	AATAAA	-10	NA	93271366	93295330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611_93293278_93293325
ES.1048.14	chr1	+	1334	10	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-9	-8184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	206.341380803994	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGGCCTTGTTGCAGT	NA	False	NA	55	True	NA	NA	NA	93271367	93293027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282160_93285475_93285584_93288447_93288535_93292611
ES.1048.15	chr1	+	3368	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	796	6151	-5	-6151	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATATATTCCTGGATTT	NA	False	NA	NA	False	AGTAAA	-36	NA	93271371	93295060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.16	chr1	+	2714	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	796	6805	-5	-6805	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTCGTCTGCTTGGTTG	NA	False	NA	NA	False	AATAGA	-11	NA	93271371	93294406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.17	chr1	+	4485	9	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-5	-9109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	213.666467596111	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCTTGGGCGGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	93271371	93292102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93271434_93273877_93274010_93278048_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447
ES.1048.18	chr1	+	5286	9	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-3	-5880	intron_retention	FALSE	canonical	3	583	junction_5	43.0755150868797	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTGTAGAATCTGATA	NA	False	NA	9	True	AATAAA	-11	NA	93271373	93295331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.19	chr1	+	4401	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	799	5115	-2	-5115	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTAGCAGTAAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	93271374	93296096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.2	chr1	+	6556	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	58	3701	58	-3701	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGAGTACTTTGTCCC	NA	False	NA	NA	False	AGTAAA	-25	NA	93270633	93297510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.20	chr1	+	1157	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	801	8357	0	-8357	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGCTCCTGATGTCGT	NA	False	NA	NA	False	NA	NA	NA	93271376	93292854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.21	chr1	+	3628	10	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	0	-5880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	206.341380803994	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTGTAGAATCTGATA	NA	False	NA	9	True	AATAAA	-11	NA	93271376	93295331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282162_93285478_93285584_93288447_93288535_93292611
ES.1048.22	chr1	+	2891	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	801	6623	0	-6623	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAATCTTAACAAATAC	NA	False	NA	NA	False	NA	NA	NA	93271376	93294588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.23	chr1	+	3525	9	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	0	-5872	combination_of_known_splicesites	FALSE	canonical	3	27	junction_6	208.918307898087	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCTGATAGACTTGAG	NA	False	NA	17	True	AATAAA	-19	NA	93271376	93295339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93285478_93285584_93288447_93288535_93292611
ES.1048.24	chr1	+	3824	10	NIC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	1	-5869	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	206.720960610083	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGATAGACTTGAGCTG	NA	False	NA	20	True	AATAAA	-22	NA	93271377	93295342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279047_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.25	chr1	+	3241	10	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	69	-8217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.585090045634	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGATGAAAGTTATTG	NA	False	NA	22	True	ATTAAA	-23	NA	93271497	93292994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93273499_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.26	chr1	+	2921	3	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	14900	5874	14047	-5874	3prime_fragment	FALSE	canonical	3	622	junction_1	31	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAATCTGATAGACTTG	NA	False	NA	15	True	AATAAA	-17	NA	93285475	93295337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93285584_93288447_93288535_93292611
ES.1048.27	chr1	+	3702	1	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	22512	4422	21659	-4422	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTACTGAGTACAGT	NA	False	NA	NA	False	NA	NA	NA	93293087	93296789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93293100_93296800
ES.1048.28	chr1	+	6428	1	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	24202	6	23349	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACAACTGTTCGTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93294777	93301205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93294800_93301200
ES.1048.3	chr1	+	4061	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	395	5859	395	-5859	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAGCTGTGGAGAAAAG	NA	False	NA	30	True	AATAAA	-32	NA	93270970	93295352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.4	chr1	+	1600	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	764	7951	-37	-7951	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGTAATCCTCAGTG	NA	False	NA	NA	False	AGTAAA	-16	NA	93271339	93293260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.5	chr1	+	3684	10	NNC	ENSMUSG00000026275.14	novel	10315	10	NA	NA	-29	-5880	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	207.956607534562	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTGTAGAATCTGATA	NA	False	NA	9	True	AATAAA	-11	NA	93271347	93295331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280217_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.6	chr1	+	2261	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	775	7279	-26	-7279	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAACTGTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	93271350	93293932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ES.1048.8	chr1	+	2771	6	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	784	18661	-17	2179	intron_retention	FALSE	canonical	3	583	junction_5	50.4816798452666	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTATATTTTATATTG	NA	False	NA	NA	False	NA	NA	NA	93271359	93282550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238
ES.1048.9	chr1	+	540	6	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	785	20891	-16	18	5prime_fragment	FALSE	canonical	3	583	junction_5	50.4816798452666	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAATAAAATCAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	93271360	93280320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238
ES.10480.1	chr14	-	3066	2	FSM	ENSMUSG00000071531.4	ENSMUST00000226511.2	438	2	-1	-2627	-1	2627	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTAGAGCTTTGACAG	NA	False	NA	NA	False	AATAAA	-17	NA	33923611	33914745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33917775_33923574
ES.10480.2	chr14	-	3258	2	FSM	ENSMUSG00000071531.4	ENSMUST00000226613.2	10354	2	-6	7102	-6	2626	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTAGAGCTTTGACA	NA	False	NA	NA	False	AATAAA	-16	NA	33923596	33914746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33917775_33923366
ES.10481.1	chr14	+	176	1	Intergenic	novelGene_8777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	33977300	33977476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_33977300_33977500
ES.10482.1	chr14	+	4837	1	Intergenic	novelGene_8780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAGTAAAGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	34014257	34019094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34014300_34019100
ES.10482.2	chr14	+	4469	2	Antisense	novelGene_ENSMUSG00000041471.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAGTAAAGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	34014260	34019094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34016341_34016705
ES.10482.3	chr14	+	153	1	Intergenic	novelGene_8781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	455	False	NA	NA	False	NA	NA	NA	34017536	34017689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34017500_34017700
ES.10483.1	chr14	+	215	1	Intergenic	novelGene_8782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGGAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	34027339	34027554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34027300_34027600
ES.10484.1	chr14	+	3277	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-166	279	-166	-279	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTATGTCACTGC	NA	False	NA	95	True	AGTAAA	-33	NA	34032517	34066943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.10	chr14	+	2348	14	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-59	-1013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	406.030429966981	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCCTTCAACCAC	NA	False	NA	10	True	AATAAA	-18	NA	34032624	34066209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34032686_34032773_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.12	chr14	+	2366	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-58	-1001	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	428.224452615894	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCACTTAAGCCTAACC	NA	False	NA	22	True	AATAAA	-30	NA	34032625	34066221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.13	chr14	+	3024	14	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-55	-358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	406.030429966981	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032628	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34032887_34032949_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.15	chr14	+	2910	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	27	-358	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	437.834604041147	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032710	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.16	chr14	+	2910	14	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	32	-358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	406.030429966981	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032715	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033011_34033100_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.17	chr14	+	4767	12	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	46	-1	46	1	intron_retention	FALSE	canonical	3	1379	junction_7	84.5118212671121	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCTCTATGGGGACG	NA	False	NA	14	True	AATAAA	-23	NA	34032729	34067223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075
ES.10484.18	chr14	+	6694	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	46	-362	intron_retention	FALSE	canonical	3	1379	junction_6	96.3077024630897	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTATGTTTCTTTTCT	NA	False	NA	12	True	ATTAAA	-15	NA	34032729	34066860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.19	chr14	+	2965	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	47	-362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	422.256109751206	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTATGTTTCTTTTCT	NA	False	NA	12	True	ATTAAA	-15	NA	34032730	34066860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047518_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.2	chr14	+	2622	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-135	903	-135	-903	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATTGGCCCTGCATCA	NA	False	NA	120	True	TATAAA	-15	NA	34032548	34066319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.20	chr14	+	2329	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	48	1013	48	-1013	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCCTTCAACCAC	NA	False	NA	10	True	AATAAA	-18	NA	34032731	34066209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.21	chr14	+	2999	14	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	51	15099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	406.030429966981	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCCACCTCCACCTCTC	NA	False	NA	NA	False	NA	NA	NA	34032734	34082321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560_34066848_34082286
ES.10484.23	chr14	+	2720	11	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	96	-358	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	441.053556838623	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032779	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34064075_34064139_34065560
ES.10484.24	chr14	+	2821	12	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	96	-358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	437.834604041147	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032779	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047514_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.25	chr14	+	1410	8	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	96	8897	96	2145	5prime_fragment	FALSE	canonical	3	1379	junction_7	47.8505325925193	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTTGGTAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-12	NA	34032779	34058325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049
ES.10484.26	chr14	+	3287	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	96	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	413.99566389302	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTAGAAGTTCTCTATG	NA	False	NA	8	True	AATAAA	-17	NA	34032779	34067217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061980_34064081_34064139_34065560
ES.10484.27	chr14	+	2953	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	96	-358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	421.99996708794	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032779	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047452_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.28	chr14	+	2819	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	111	-379	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	438.440474393933	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTACCTTTTCCAAA	NA	False	NA	-5	True	GATAAA	-11	NA	34032794	34066843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.29	chr14	+	2478	13	NNC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	539	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	420.117270334526	1246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTATGTTTCTTTT	NA	False	NA	10	True	ATTAAA	-13	NA	34033222	34066858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058525_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.3	chr14	+	3525	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-130	-5	-130	5	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTATGGGGACGCCCC	NA	False	NA	18	True	AATAAA	-27	NA	34032553	34067227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.30	chr14	+	2449	1	Intergenic	novelGene_8783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTTCAAAGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34033424	34035873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34033400_34035900
ES.10484.31	chr14	+	1609	1	Intergenic	novelGene_8784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTAGCGATCAACTGAC	NA	False	NA	NA	False	NA	NA	NA	34034855	34036464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34034900_34036500
ES.10484.32	chr14	+	1760	12	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	9153	1016	-8782	-1016	3prime_fragment	FALSE	canonical	3	1379	junction_6	95.5999757944573	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATAAATTGCCTTCAAC	785	False	NA	7	True	AATAAA	-15	NA	34041836	34066206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.33	chr14	+	1699	11	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	11040	995	-6895	-995	3prime_fragment	FALSE	canonical	3	1379	junction_5	97.3065259887537	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGCCTAACCTTTACT	2672	False	NA	28	True	AATAAA	-36	NA	34043723	34066227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.34	chr14	+	6669	6	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-208	-362	intron_retention	FALSE	canonical	3	1379	junction_1	101.86147456227	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTATGTTTCTTTTCT	478	False	NA	12	True	ATTAAA	-15	NA	34053947	34066860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075
ES.10484.35	chr14	+	4253	8	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	21609	1	137	-1	3prime_fragment	FALSE	canonical	3	1379	junction_2	109.986826669453	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAAGTTCTCTATGGGGA	823	False	NA	12	True	AATAAA	-21	NA	34054292	34067221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.36	chr14	+	3132	8	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	22373	358	901	-358	3prime_fragment	FALSE	canonical	3	1379	junction_2	109.986826669453	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	1587	False	NA	16	True	ATTAAA	-19	NA	34055056	34066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.37	chr14	+	210	1	FSM	ENSMUSG00000115431.2	ENSMUST00000226608.2	303	1	163	-70	163	70	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	34067400	34067610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34067400_34067600
ES.10484.4	chr14	+	1137	1	Genic_Genomic	ENSMUSG00000021794.17	novel	NA	NA	NA	NA	-94	-22454	mono-exon	FALSE	NA	NA	NA	NA	NA	1109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTTTTTGTGTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	34032589	34033726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_34032600_34033700
ES.10484.5	chr14	+	3362	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	-93	121	-93	-121	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCCTTCAAAGTTATT	NA	False	NA	NA	False	NA	NA	NA	34032590	34067101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.6	chr14	+	3397	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-87	1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	428.224452615894	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCTCTATGGGGACG	NA	False	NA	14	True	AATAAA	-23	NA	34032596	34067223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.7	chr14	+	2305	1	Genic_Genomic	ENSMUSG00000021794.17	novel	NA	NA	NA	NA	-72	-21264	mono-exon	FALSE	NA	NA	NA	NA	NA	1110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTTATTATTTTAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	34032611	34034916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_34032600_34034900
ES.10484.8	chr14	+	3097	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-72	-284	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	428.224452615894	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATAACTGTCTATGTC	NA	False	NA	90	True	AGTAAA	-28	NA	34032611	34066938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10484.9	chr14	+	3358	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	-62	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	437.834604041147	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCTCTATGGGGACG	NA	False	NA	14	True	AATAAA	-23	NA	34032621	34067223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ES.10485.1	chr14	+	4527	10	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-13103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.8824017459885	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	NA	False	NA	6	True	AATAAA	-16	NA	34084318	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34084883_34087565_34087676_34088315_34088446_34097672_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.10	chr14	+	4567	8	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-9948	-545	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.9825841162441	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	1456	False	NA	NA	False	NA	NA	NA	34087473	34125699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087676_34096485_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.11	chr14	+	769	3	Antisense	novelGene_ENSMUSG00000023064.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	2	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCAGTGTCCCAGGCT	1458	False	NA	16	True	AAGAAA	-17	NA	34087475	34096924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34087676_34088315_34088446_34096485
ES.10485.12	chr14	+	3860	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-9946	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9424752984303	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	1458	False	NA	6	True	AATAAA	-16	NA	34087475	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087676_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.13	chr14	+	2962	1	Genic_Genomic	ENSMUSG00000041445.10	novel	NA	NA	NA	NA	-910	-20412	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGCCTCCTGCTTTCT	3980	False	NA	NA	False	ATTAAA	-15	NA	34096511	34099473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_34096500_34099500
ES.10485.14	chr14	+	4204	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	46	-276	46	276	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCAGTGTTGGTTGGC	4936	False	NA	NA	False	AATAAA	-13	NA	34097467	34126520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.15	chr14	+	3559	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	605	-215	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.9424752984303	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTTTGTCTTTGTTTA	5751	False	NA	NA	False	NA	NA	NA	34098282	34126029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34098397_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.16	chr14	+	3002	1	Intergenic	novelGene_8788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTCTGACTGCGTGT	7156	False	NA	11	True	AAAAAG	-36	NA	34099687	34102689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34099700_34102700
ES.10485.17	chr14	+	4195	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3051	283	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTGGCTGATTTG	8197	False	NA	NA	False	AATAAA	-20	NA	34100728	34126527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.18	chr14	+	3905	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3058	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	8204	False	NA	6	True	AATAAA	-16	NA	34100735	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.19	chr14	+	3382	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3064	-517	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAAATGA	8210	False	NA	NA	False	NA	NA	NA	34100741	34125727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.2	chr14	+	4947	11	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-13073	-500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.5807440090002	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTTTTTTTTTACCC	NA	False	NA	NA	False	NA	NA	NA	34084348	34125744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34084622_34084803_34084883_34087561_34087676_34088374_34088446_34096485_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.20	chr14	+	3443	6	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3081	-517	intron_retention	FALSE	canonical	3	7	junction_1	20.4450483002609	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAAATGA	8227	False	NA	NA	False	NA	NA	NA	34100758	34125727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34100981_34118121_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.21	chr14	+	3580	5	ISM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	20858	0	20602	0	3prime_fragment	FALSE	canonical	3	26	junction_1	17.1664644001029	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	NA	False	NA	6	True	AATAAA	-16	NA	34118279	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.3	chr14	+	5273	9	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-12753	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8168660205559	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	NA	False	NA	6	True	AATAAA	-16	NA	34084668	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34084883_34096485_34097736_34100831_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.4	chr14	+	2700	1	Intergenic	novelGene_8787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTTAGTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	34085892	34088592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34085900_34088600
ES.10485.5	chr14	+	3930	8	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-10144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.3449838374706	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	1260	False	NA	6	True	AATAAA	-16	NA	34087277	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087319_34097506_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.6	chr14	+	5300	8	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-10136	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.9825841162441	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	1268	False	NA	6	True	AATAAA	-16	NA	34087285	34126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087676_34096485_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.7	chr14	+	4170	8	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-10131	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.87254359386	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCTCTGCCTGTTTAC	1273	False	NA	1	True	AATAAA	-11	NA	34087290	34126239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087676_34088315_34088446_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10485.8	chr14	+	694	2	Antisense	novelGene_ENSMUSG00000023064.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCAGTGTCCCAGGCT	1403	False	NA	16	True	AAGAAA	-17	NA	34087420	34096924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34087676_34096485
ES.10485.9	chr14	+	5441	10	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	-10001	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	21.0102855469751	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTGCCTGTTTACTG	1403	False	NA	3	True	AATAAA	-13	NA	34087420	34126241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34087676_34088315_34088446_34096485_34097736_34100831_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ES.10486.1	chr14	-	1302	1	FSM	ENSMUSG00000115124.2	ENSMUST00000227403.2	1110	1	-193	1	-193	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGGTGCATGCCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	33953878	33952576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33952600_33953900
ES.10486.10	chr14	-	3612	10	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	31.8134997356798	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032527	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34030996_34031052_34032123
ES.10486.11	chr14	-	3386	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	31.7587355533972	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032500	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.12	chr14	-	3520	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	32.0132784950245	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032544	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
ES.10486.14	chr14	-	3405	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.6551680442775	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032419	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34015811_34015870_34030996_34031052_34032123
ES.10486.15	chr14	-	3341	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	29.4270388806613	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032431	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.17	chr14	-	3356	9	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	34.2563862659213	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032536	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_34030996_34031052_34032123
ES.10486.18	chr14	-	4440	12	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-833	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.0072011482124	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34033283	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33973632_33973796_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.19	chr14	-	2724	4	ISM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	63376	4	27269	-4	3prime_fragment	FALSE	canonical	3	69	junction_3	9.7410927974683	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGTGAAGCTTTTA	9859	False	NA	-18	True	AATATA	-29	NA	33968947	33958993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118
ES.10486.2	chr14	-	3689	12	Fusion	ENSMUSG00000115124.2_ENSMUSG00000041471.10	novel	3317	11	NA	NA	-28	-3	multi-exon	FALSE	canonical	0	0	junction_1	28.1148765067844	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGTGGTGCATGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	34032478	33952578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_33953155_33959372_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.20	chr14	-	2046	8	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-77	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.0504182092417	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTCTGTGAAGCTTT	NA	False	NA	-20	True	AATATA	-27	NA	34032527	33958995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_34030996_34031052_34032123
ES.10486.21	chr14	-	3539	10	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-52	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	34.3025752191678	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTCTGTGAAGCTTT	NA	False	NA	-20	True	AATATA	-27	NA	34032502	33958995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.22	chr14	-	3511	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-53	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.2083322207387	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTCTGTGAAGCT	NA	False	NA	-22	True	AATATA	-25	NA	34032503	33958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970998_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.23	chr14	-	3568	12	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-50	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.1712311877687	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTCTGTGAAGCT	NA	False	NA	-22	True	AATATA	-25	NA	34032500	33958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34015811_34015870_34030996_34031052_34032123
ES.10486.25	chr14	-	1960	9	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-42	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	26.1745940751714	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTCTGTGAAGCT	NA	False	NA	-22	True	AATATA	-25	NA	34032492	33958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_34030996_34031052_34032123
ES.10486.26	chr14	-	3454	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	20.0858158908221	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAATTCTGTGAAGC	NA	False	NA	-23	True	AATATA	-24	NA	34032445	33958998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.27	chr14	-	3217	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	-170	270	-43	-270	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAATGTTTTGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	34032493	33959259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.28	chr14	-	200	1	Intergenic	novelGene_8778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAAACTTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	33982086	33981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_33981900_33982100
ES.10486.29	chr14	-	3281	4	NIC	ENSMUSG00000041471.10	novel	774	3	NA	NA	26	3	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.7332502076846	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCATTTAATGTGAACT	NA	False	NA	NA	False	NA	NA	NA	34032424	33988074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.3	chr14	-	1726	1	Intergenic	novelGene_8776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGCAGTGAAGCACAATTC	NA	False	NA	NA	False	NA	NA	NA	33958352	33956626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_33956600_33958400
ES.10486.30	chr14	-	3242	3	FSM	ENSMUSG00000041471.10	ENSMUST00000227375.2	774	3	-28	-2440	-28	0	multi-exon	FALSE	canonical	2	5	junction_1	42	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACCCATTTAATGTGA	NA	False	NA	NA	False	NA	NA	NA	34032478	33988077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33990910_34030996_34031052_34032123
ES.10486.31	chr14	-	1770	5	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	6	846	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	29.4904645605999	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAGTATAACTG	NA	False	NA	NA	False	AATAAA	-14	NA	34032444	33989671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
ES.10486.32	chr14	-	1765	4	NIC	ENSMUSG00000041471.10	novel	774	3	NA	NA	-56	845	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.7332502076846	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATCAGAAGTATAACT	NA	False	NA	NA	False	AATAAA	-13	NA	34032506	33989672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.33	chr14	-	158	1	Intergenic	novelGene_8779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	34004399	34004241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34004200_34004400
ES.10486.4	chr14	-	3646	11	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-86	92	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	20.0858158908221	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTACTGGGCTAGGGA	NA	False	NA	78	True	TATAAA	-26	NA	34032536	33958897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.5	chr14	-	3619	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	-220	-82	-93	82	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATAACTGTGTCTACT	NA	False	NA	68	True	TATAAA	-16	NA	34032543	33958907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ES.10486.6	chr14	-	3677	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-49	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	27.4082104486958	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCTTTTATTATTTG	NA	False	NA	-11	True	AATATA	-36	NA	34032499	33958986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
ES.10486.7	chr14	-	3632	12	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	25.9930060523281	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032548	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
ES.10486.8	chr14	-	3429	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	24.9131825880731	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032501	33958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34030996_34031052_34032123
ES.10487.1	chr14	-	174	1	Intergenic	novelGene_8785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAGTAAATGTAAAA	NA	False	NA	NA	False	NA	NA	NA	34039937	34039763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34039800_34039900
ES.10488.1	chr14	-	7927	7	Antisense	novelGene_ENSMUSG00000021794.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTGGTGGCATGCACC	NA	False	NA	NA	False	NA	NA	NA	34059547	34040486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_34041919_34043723_34043781_34047469_34047533_34051244_34056245_34057254_34057395_34058047_34058186_34058450
ES.10489.1	chr14	-	170	1	Intergenic	novelGene_8786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	34061240	34061070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34061100_34061200
ES.1049.1	chr1	-	3751	4	NNC	ENSMUSG00000026273.14	novel	1525	3	NA	NA	1	55237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5270067514739	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTCATCAGTGTATC	NA	False	NA	NA	False	NA	NA	NA	93233584	93171695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93174725_93230439_93230625_93232329_93232829_93233546
ES.1049.10	chr1	-	5763	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	2	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.5297285872582	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTATGAGTGTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	93271185	93236431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238511_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259276_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.12	chr1	-	5846	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	0	-67	0	59	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCCTTATGAGTGTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	93270511	93236432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.13	chr1	-	7316	11	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-9905	57	intron_retention	FALSE	canonical	3	119	junction_10	42.8402847796324	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGATGCCTTATGAGTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	93255040	93236434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937
ES.1049.14	chr1	-	5794	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	27	56	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	50.745582929465	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGATGCCTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	93270484	93236435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238511_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.16	chr1	-	5604	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	2	28	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	52.6961650706082	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCATTAAAGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	93270509	93236463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270456
ES.1049.17	chr1	-	5119	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	-4	664	-4	396	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTGTTT	NA	False	NA	-3	True	GATAAA	-19	NA	93270515	93237163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.18	chr1	-	5120	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-54	394	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGTTTGT	NA	False	NA	-5	True	GATAAA	-17	NA	93271258	93237165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.2	chr1	-	171	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAACATTAAGACA	NA	False	NA	NA	False	NA	NA	NA	93218029	93217858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93217900_93218000
ES.1049.20	chr1	-	4987	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-10	354	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	53.0259452065864	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAGGACTATATGAGA	NA	False	NA	-45	True	ATTAAA	-22	NA	93271214	93237205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93271036
ES.1049.21	chr1	-	7860	17	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	26	354	intron_retention	FALSE	canonical	3	108	junction_16	39.2681088798531	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAGGACTATATGAGA	NA	False	NA	-45	True	ATTAAA	-22	NA	93270485	93237205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.22	chr1	-	2397	4	NNC	ENSMUSG00000026274.12	novel	2489	6	NA	NA	1774	351	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	106.715613769599	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCCAGGACTATATG	NA	False	NA	-48	True	ATTAAA	-19	NA	93243361	93237208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240646_93242002
ES.1049.23	chr1	-	5066	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	2	351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.3706675779579	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCCAGGACTATATG	NA	False	NA	-48	True	ATTAAA	-19	NA	93270509	93237208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240646_93241998_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.24	chr1	-	4537	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-2	25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	52.6961650706082	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTTGTTTTTG	NA	False	NA	16	True	NA	NA	NA	93270513	93237534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270456
ES.1049.25	chr1	-	3567	8	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-4057	16	intron_retention	FALSE	canonical	3	113	junction_5	43.0130497521344	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTCTATTTTTGTTGT	NA	False	NA	7	True	ATTAAA	-43	NA	93249192	93237543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496
ES.1049.26	chr1	-	4811	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	-85	1053	-85	7	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTTAAGTTCTCTAT	NA	False	NA	-2	True	ATTAAA	-34	NA	93270596	93237552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.27	chr1	-	5036	8	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-3878	7	intron_retention	FALSE	canonical	0	0	junction_6	77.790666246678	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTTAAGTTCTCTAT	NA	False	NA	-2	True	ATTAAA	-34	NA	93249013	93237552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93245039_93248398_93248496
ES.1049.28	chr1	-	4680	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.5798082093513	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTTAAGTTCTCTAT	NA	False	NA	-2	True	ATTAAA	-34	NA	93270480	93237552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247696_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.29	chr1	-	8450	16	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-64	5	intron_retention	FALSE	canonical	3	33	junction_15	49.9341788980476	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTGTTTAAGTTCTCT	NA	False	NA	-4	True	ATTAAA	-32	NA	93271268	93237554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93263568_93265066_93265303_93270987
ES.1049.3	chr1	-	5049	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	34	-3717	-2	1723	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGGATTTTTTATC	NA	False	NA	NA	False	TATAAA	-16	NA	93233603	93225209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ES.1049.30	chr1	-	4732	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-55	5	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTGTTTAAGTTCTCT	NA	False	NA	-4	True	ATTAAA	-32	NA	93271259	93237554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.32	chr1	-	7297	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	59.6576159586394	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTGTTTAAGTTCTC	NA	False	NA	-5	True	ATTAAA	-31	NA	93271183	93237555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93245039_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.33	chr1	-	4652	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	49	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	50.745582929465	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTGTTTAAGTTCTC	NA	False	NA	-5	True	ATTAAA	-31	NA	93270462	93237555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238511_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.34	chr1	-	4502	17	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	21	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	49.0393655648195	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAGTGTTTAAGTTCTC	NA	False	NA	-5	True	ATTAAA	-31	NA	93270490	93237555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.35	chr1	-	4642	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	259	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	53.3578375079933	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAGTGTTTAAGTTCT	NA	False	NA	-6	True	ATTAAA	-30	NA	93270928	93237556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270744
ES.1049.36	chr1	-	4695	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	47.0275631465392	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAGTGTTTAAGTTCT	NA	False	NA	-6	True	ATTAAA	-30	NA	93270516	93237556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238605_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.37	chr1	-	5715	16	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	2	3	intron_retention	FALSE	canonical	3	108	junction_15	41.0863589149597	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAGTGTTTAAGTTCT	NA	False	NA	-6	True	ATTAAA	-30	NA	93270509	93237556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93263568_93265066_93265303_93270247
ES.1049.38	chr1	-	4677	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	43	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.3706675779579	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAGTGTTTAAGTTCT	NA	False	NA	-6	True	ATTAAA	-30	NA	93270468	93237556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240646_93241998_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.4	chr1	-	1330	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	18	18	-18	-18	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGTGCAACCCTTCCAG	NA	False	NA	-17	True	AATAAA	-21	NA	93233619	93228944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ES.1049.40	chr1	-	4640	18	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.1719676227896	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGGAGTGTTTAAGTT	NA	False	NA	-8	True	ATTAAA	-28	NA	93270456	93237558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255170_93258472_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.42	chr1	-	8795	16	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	2	junction_15	51.6485559656157	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAAGGAGTGTTTAAG	NA	False	NA	-10	True	ATTAAA	-26	NA	93271213	93237560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93242203_93244506_93244642_93244742_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93271036
ES.1049.43	chr1	-	11621	15	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	102	-3	intron_retention	FALSE	canonical	3	108	junction_14	37.1736822639515	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACAAGGAGTGTTTA	NA	False	NA	-12	True	ATTAAA	-24	NA	93270409	93237562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93242203_93244506_93244642_93244742_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.44	chr1	-	4478	17	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	54.999396303505	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACAAGGAGTGTTTA	NA	False	NA	-12	True	ATTAAA	-24	NA	93270509	93237562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93270247
ES.1049.46	chr1	-	7863	16	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	33	junction_15	50.1537192594483	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACAAGGAGTGTTTA	NA	False	NA	-12	True	ATTAAA	-24	NA	93271219	93237562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.47	chr1	-	4210	5	NIC	ENSMUSG00000026274.12	novel	2489	6	NA	NA	-911	-3	intron_retention	FALSE	canonical	3	168	junction_4	22.92787604642	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACAAGGAGTGTTTA	NA	False	NA	-12	True	ATTAAA	-24	NA	93246046	93237562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93240652_93242002_93242203_93244506_93244642_93244742
ES.1049.48	chr1	-	7596	16	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	32	-3	intron_retention	FALSE	canonical	3	108	junction_15	39.6408319231012	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACAAGGAGTGTTTA	NA	False	NA	-12	True	ATTAAA	-24	NA	93270479	93237562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93247850_93248215_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.5	chr1	-	5383	21	Fusion	ENSMUSG00000026273.14_ENSMUSG00000026274.12	novel	5779	18	NA	NA	43	-21	multi-exon	FALSE	canonical	0	0	junction_2	60.6299224805706	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGGGTGCAACCCTTC	NA	False	NA	-20	True	AATAAA	-18	NA	93270468	93228947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_93229518_93230439_93230625_93233931_93233991_93237666_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.50	chr1	-	4726	17	NNC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-55	-5	intron_retention	FALSE	canonical	0	0	junction_6	61.3126911312006	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGACACAAGGAGTGTT	NA	False	NA	-14	True	ATTAAA	-22	NA	93271259	93237564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247776_93247850_93248215_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.1049.53	chr1	-	6203	16	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	5330	-12	intron_retention	FALSE	canonical	3	113	junction_5	34.4063301669265	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCCTCAGAAAGACACAAG	NA	False	NA	-21	True	ATTAAA	-15	NA	93265181	93237571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066
ES.1049.54	chr1	-	11233	4	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	11972	2630	intron_retention	FALSE	canonical	3	131	junction_2	16.9901932498329	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTTGGAAGTATA	NA	False	NA	NA	False	NA	NA	NA	93258539	93242919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93244642_93244742_93252078_93253085_93255199_93258476
ES.1049.55	chr1	-	5192	12	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	5265	2630	intron_retention	FALSE	canonical	3	113	junction_2	15.8234056160251	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTTGGAAGTATA	NA	False	NA	NA	False	NA	NA	NA	93265246	93242919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93244642_93244742_93244869_93247681_93247850_93248215_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066
ES.1049.56	chr1	-	3962	15	NNC	ENSMUSG00000026274.12	novel	5641	12	NA	NA	8	2595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.0196182995797	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93270503	93242954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93243099_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ES.1049.57	chr1	-	6335	12	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-9	2595	intron_retention	FALSE	canonical	3	33	junction_11	34.8531749149614	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93271213	93242954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93244642_93244742_93244869_93247681_93247850_93248215_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93263568_93265066_93265303_93270987
ES.1049.6	chr1	-	1098	4	FSM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	-20	2019	-4	-25	multi-exon	FALSE	canonical	3	13	junction_1	30.4448499567478	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCAGGGGGTGCAACC	NA	False	NA	-24	True	AATAAA	-14	NA	93233605	93228951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93229307_93230439_93230625_93232329_93232829_93233546
ES.1049.7	chr1	-	3915	2	FSM	ENSMUSG00000026273.14	ENSMUST00000152307.2	1664	2	17	-2268	1	-25	multi-exon	FALSE	canonical	3	72	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCAGGGGGTGCAACC	NA	False	NA	-24	True	AATAAA	-14	NA	93233584	93228951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93232829_93233546
ES.1049.8	chr1	-	2202	3	FSM	ENSMUSG00000026273.14	ENSMUST00000112942.2	1525	3	8	-685	7	-27	multi-exon	FALSE	canonical	3	72	junction_2	5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATCCAGGGGGTGCAA	NA	False	NA	-26	True	AATAAA	-12	NA	93233578	93228953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93230625_93232329_93232829_93233546
ES.1049.9	chr1	-	5856	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-55	61	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTATGAGTGTTCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	93271259	93236430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
ES.10490.1	chr14	-	508	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-101	1	-101	-1	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGAGTTTACCTCTGT	NA	False	NA	-7	True	AATAAA	-20	NA	34077491	34073838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34074035_34075654_34075718_34077242
ES.10490.2	chr14	-	329	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	431	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1292.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTCCTGAGTTTACC	NA	False	NA	-12	True	AATAAA	-15	NA	34076959	34073843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34074035_34075654_34075718_34076884
ES.10490.3	chr14	-	449	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	-6932	-6	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	1267.5	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTCCTGAGTTTACC	NA	False	NA	-12	True	AATAAA	-15	NA	34084322	34073843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34074035_34075654_34075718_34084127
ES.10490.4	chr14	-	1940	2	ISM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	-15	8	-15	-8	intron_retention	FALSE	canonical	3	2585	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGTCCTGAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	34077405	34073845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_34074035_34075654
ES.10491.1	chr14	-	3924	1	Genic_Genomic	ENSMUSG00000023064.5	novel	NA	NA	NA	NA	1380	788	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATTAAGGGACTGAG	7334	False	NA	NA	False	NA	NA	NA	34095366	34091442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_34091400_34095400
ES.10491.2	chr14	-	4922	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	-4072	2	-4072	-2	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCAGTGCTTCTTCTTTGT	1882	False	NA	NA	False	AATAAA	-17	NA	34100818	34092232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
ES.10492.1	chr14	-	1702	2	Antisense	novelGene_ENSMUSG00000041445.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGTTTTACTCTAGAG	5253	False	NA	NA	False	NA	NA	NA	34112517	34105519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_34105811_34111106
ES.10493.1	chr14	-	178	1	Intergenic	novelGene_8789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	34122614	34122436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34122400_34122600
ES.10494.1	chr14	+	5257	3	Antisense	novelGene_ENSMUSG00000021796.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTGGGGATAAGGGTA	NA	False	NA	NA	False	NA	NA	NA	34132651	34139272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34136847_34137662_34138518_34139065
ES.10494.2	chr14	+	6620	1	Antisense	novelGene_ENSMUSG00000021796.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTGGGGATAAGGGTA	NA	False	NA	NA	False	NA	NA	NA	34132652	34139272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34132700_34139300
ES.10494.3	chr14	+	3010	13	Genic_Genomic	ENSMUSG00000090779.2	novel	735	3	NA	NA	-88048	-10	multi-exon	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTTCGCGGGGCGGGGG	NA	False	NA	NA	False	NA	NA	NA	34135623	34224631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_34136627_34136716_34136847_34137662_34137840_34144516_34144813_34146900_34147094_34151610_34151764_34156341_34156434_34156592_34156691_34163054_34163159_34165775_34165941_34169730_34169936_34182455_34182570_34224351
ES.10494.4	chr14	+	174	1	Intergenic	novelGene_8792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCAATCAATCAATCAA	NA	False	NA	NA	False	NA	NA	NA	34194373	34194547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34194400_34194500
ES.10494.5	chr14	+	156	1	Intergenic	novelGene_8793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34204635	34204791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34204600_34204800
ES.10494.6	chr14	+	175	1	Intergenic	novelGene_8794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAACATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34206366	34206541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34206400_34206500
ES.10494.7	chr14	+	185	1	Intergenic	novelGene_8795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAGTGTTACA	NA	False	NA	NA	False	NA	NA	NA	34217036	34217221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34217000_34217200
ES.10495.1	chr14	+	4948	1	Antisense	novelGene_ENSMUSG00000021796.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGGGAGGGAGGGAG	4726	False	NA	NA	False	NA	NA	NA	34224769	34229717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34224800_34229700
ES.10496.1	chr14	-	3614	1	Genic_Genomic	ENSMUSG00000021796.16	novel	NA	NA	NA	NA	49071	2862	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAACCTCGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	34133442	34129828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_34129800_34133400
ES.10496.10	chr14	-	5506	12	NIC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	6	-330	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	38.1107563827604	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	-3	True	AGTAAA	-21	NA	34224638	34133020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34224351
ES.10496.11	chr14	-	6431	11	NIC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	9	-332	intron_retention	FALSE	canonical	3	65	junction_10	21.7108267921791	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224476	34133022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_34136627_34136716_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.12	chr14	-	6358	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-20	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.3282537761216	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224664	34133022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34183064_34223318_34223539_34224351
ES.10496.13	chr14	-	5470	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-76	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0057002820498	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224561	34133022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34133385_34133458_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
ES.10496.15	chr14	-	5294	12	NIC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	5	-335	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	39.3257218203839	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTCAGTGATGTGTTTT	NA	False	NA	-8	True	AGTAAA	-16	NA	34224480	34133025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34169728_34169936_34182455_34182570_34224351
ES.10496.16	chr14	-	7852	11	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	22114	-335	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	57.1560145566501	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTCAGTGATGTGTTTT	NA	False	NA	-8	True	AGTAAA	-16	NA	34160399	34133025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156856_34157057_34157837_34158075_34160157_34160312
ES.10496.17	chr14	-	5356	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	144	456	-15	-456	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTTGTACAGCAT	NA	False	NA	NA	False	AATATA	-24	NA	34224500	34133146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.18	chr14	-	5378	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	53	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.5868393859992	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTAAGTGTATTTTGT	NA	False	NA	NA	False	AATATA	-17	NA	34224432	34133153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182573_34224351
ES.10496.19	chr14	-	4652	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	168	1136	9	-1136	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTCCTGGAATGTGC	NA	False	NA	NA	False	CATAAA	-21	NA	34224476	34133826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.2	chr14	-	5936	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	26	-6	26	6	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACATTGGAAAGTTTC	NA	False	NA	-5	True	AATAAA	-28	NA	34224618	34132684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.21	chr14	-	4559	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	26	-1374	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCGTCATGTGTGGTTT	NA	False	NA	NA	False	AATAAA	-45	NA	34224618	34134064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
ES.10496.23	chr14	-	3855	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	18	2083	18	1669	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATATACCTAAGGAATA	NA	False	NA	NA	False	AATAAA	-29	NA	34224626	34134773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.24	chr14	-	3546	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	-20	2430	-20	1322	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTGGTTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34224664	34135120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.25	chr14	-	3598	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-11	1322	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTGGTTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34224496	34135120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
ES.10496.26	chr14	-	3595	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	25	1322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8682782684743	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTGGTTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34224619	34135120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182570_34224351
ES.10496.28	chr14	-	3210	11	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-37	1322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.8005580322388	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTGGTTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34224522	34135120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
ES.10496.29	chr14	-	3355	12	NIC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	57	1322	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	38.1107563827604	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTGGTTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34224587	34135120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34224351
ES.10496.30	chr14	-	3571	2	ISM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	85857	2436	43726	1316	intron_retention	FALSE	canonical	3	141	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAGATCTGGTTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	34138787	34135126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_34136627_34136716
ES.10496.32	chr14	-	3525	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	75	1298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	44.8216716390711	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGCCTTGTTATCTCAA	NA	False	NA	NA	False	AATAAA	-28	NA	34225223	34135144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34225130
ES.10496.33	chr14	-	3234	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	138	2584	-21	1168	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAATTTGGTTTTA	NA	False	NA	NA	False	AGTAAA	-20	NA	34224506	34135274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.35	chr14	-	2996	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	-12	2972	-12	780	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTCTGTCTTGAACCA	NA	False	NA	NA	False	TATAAA	-21	NA	34224656	34135662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10496.36	chr14	-	3154	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	46	773	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	42.7092828344926	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGAGCTCTCTGTCT	NA	False	NA	NA	False	TATAAA	-14	NA	34224598	34135669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34223318_34223539_34224351
ES.10496.37	chr14	-	2758	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	6	625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8682782684743	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTTCTCCACTGACTT	NA	False	NA	NA	False	CATAAA	-22	NA	34224479	34135817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182570_34224351
ES.10496.38	chr14	-	170	1	Intergenic	novelGene_8790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTATAGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	34164277	34164107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34164100_34164300
ES.10496.39	chr14	-	183	1	Intergenic	novelGene_8791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATTGCTCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	34173215	34173032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34173000_34173200
ES.10496.4	chr14	-	6066	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	44.0043031784944	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCACTATTGACATTGG	NA	False	NA	-13	True	AATAAA	-20	NA	34225315	34132692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34225130
ES.10496.5	chr14	-	5851	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-1	-326	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTTTGTGATGCTG	NA	False	NA	1	True	AGTAAA	-25	NA	34224645	34133016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
ES.10496.7	chr14	-	5643	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	-76	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.5868393859992	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGTTTTGTGATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	34224561	34133017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182361_34182573_34224351
ES.10496.9	chr14	-	5651	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	-23	328	-23	-328	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTGTTTTGTGATGC	NA	False	NA	-1	True	AGTAAA	-23	NA	34224667	34133018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ES.10497.1	chr14	+	178	2	Antisense	novelGene_ENSMUSG00000115007.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1105	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	4600	False	NA	NA	False	NA	NA	NA	34263400	34420880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_34263503_34420804
ES.10497.102	chr14	+	3913	20	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_3	295.445613951746	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395888	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34413895_34414542_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.104	chr14	+	4621	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_4	317.295121150353	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395888	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34440825_34440868_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.108	chr14	+	4960	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	16	1375	16	389	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAATCCGTTTTTCCAG	NA	False	NA	NA	False	AGTAAA	-26	NA	34395900	34468565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.109	chr14	+	4322	19	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	17	-3	intron_retention	FALSE	canonical	2	6	junction_2	302.540625779272	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTTTGGTTGTTGT	NA	False	NA	4	True	AATAAA	-16	NA	34395901	34468171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.11	chr14	+	6168	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-54	-3	intron_retention	FALSE	non_canonical	0	0	junction_16	318.215859650856	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395830	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396086_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461394_34463013_34463103_34466765_34466862_34467581
ES.10497.111	chr14	+	3461	11	ISM	ENSMUSG00000041408.19	ENSMUST00000169910.8	4066	20	-177	13930	17	7193	5prime_fragment	FALSE	canonical	3	756	junction_1	93.794669358125	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCATGTCATGGCTTT	NA	False	NA	NA	False	AATACA	-44	NA	34395901	34453979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465
ES.10497.114	chr14	+	4539	19	NNC	ENSMUSG00000041408.19	novel	1820	11	NA	NA	232	0	intron_retention	FALSE	canonical	0	0	junction_1	242.4003231571	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34396361	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396747_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.115	chr14	+	5916	18	ISM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	3025	3	2780	-3	3prime_fragment	FALSE	canonical	3	770	junction_2	83.4594155769312	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34398909	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.117	chr14	+	8166	16	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	2841	0	intron_retention	FALSE	canonical	3	770	junction_2	85.1585710438017	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34398970	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34458803_34459227_34459344_34459812_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.118	chr14	+	5663	17	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	2887	-1	intron_retention	FALSE	canonical	3	770	junction_2	84.6846863001216	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTTTGGTTGTTGTTC	NA	False	NA	6	True	AATAAA	-18	NA	34399016	34468173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34463103_34466765_34466862_34467581
ES.10497.119	chr14	+	5424	18	NNC	ENSMUSG00000041408.19	novel	1820	11	NA	NA	6927	-1	intron_retention	FALSE	canonical	1	14	junction_1	246.202226497203	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34403056	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34403085_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.120	chr14	+	228	1	Intergenic	novelGene_8803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	988	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTACATTAAAGTACTACA	NA	False	NA	NA	False	AATAAA	-41	NA	34408213	34408441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34408200_34408400
ES.10497.121	chr14	+	5399	17	ISM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	17752	0	-2657	0	3prime_fragment	FALSE	canonical	3	770	junction_1	83.176746111819	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34413636	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.123	chr14	+	4721	17	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-2072	-4	intron_retention	FALSE	canonical	0	0	junction_6	318.780041476486	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACGTTGTCTTTAACA	NA	False	NA	10	True	AATAAA	-15	NA	34414221	34469936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451207_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.124	chr14	+	4498	17	FSM	ENSMUSG00000041408.19	ENSMUST00000111895.8	2688	17	-45	-1765	-45	-1	multi-exon	FALSE	canonical	1	1	junction_1	252.830971204083	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34416248	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34416404_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.125	chr14	+	4450	17	NNC	ENSMUSG00000041408.19	novel	2688	17	NA	NA	-34	-7	intron_retention	FALSE	canonical	0	0	junction_1	253.066683097064	1229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34416259	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34416391_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.126	chr14	+	160	1	Intergenic	novelGene_8804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1073	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	34420699	34420859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34420700_34420900
ES.10497.127	chr14	+	181	1	Intergenic	novelGene_8805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1069	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34423138	34423319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34423100_34423300
ES.10497.128	chr14	+	180	1	Intergenic	novelGene_8806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1080	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACTCATCC	NA	False	NA	NA	False	NA	NA	NA	34439787	34439967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34439800_34440000
ES.10497.129	chr14	+	159	1	Intergenic	novelGene_8807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	34441317	34441476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34441300_34441500
ES.10497.13	chr14	+	6373	19	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-53	-7	intron_retention	FALSE	non_canonical	0	0	junction_14	302.060189407163	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395831	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459818_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.131	chr14	+	3338	9	NNC	ENSMUSG00000041408.19	novel	2688	17	NA	NA	5587	-2	intron_retention	FALSE	canonical	0	0	junction_3	353.14798597755	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTGTCTTTAACATA	NA	False	NA	12	True	AATAAA	-17	NA	34453533	34469938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34453567_34455687_34455765_34458626_34458803_34459206_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.132	chr14	+	5326	7	ISM	ENSMUSG00000041408.19	ENSMUST00000111895.8	2688	17	40216	-1766	-2718	0	3prime_fragment	FALSE	canonical	3	970	junction_3	47.8379788684913	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34456509	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.133	chr14	+	2167	2	NNC	ENSMUSG00000041408.19	novel	1820	11	NA	NA	8437	-7	intron_retention	FALSE	canonical	0	0	junction_1	0	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34467664	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34469709_34469810
ES.10497.14	chr14	+	6388	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-298	-1905	-53	2	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCTTTAACATAAGTC	NA	False	NA	16	True	AATAAA	-21	NA	34395831	34469942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.16	chr14	+	6281	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-53	-2	intron_retention	FALSE	canonical	2	32	junction_2	233.021083777337	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTGTCTTTAACATA	NA	False	NA	12	True	AATAAA	-17	NA	34395831	34469938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34399327_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.17	chr14	+	5061	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-53	-2	intron_retention	FALSE	canonical	3	756	junction_1	100.934148939521	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395831	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.2	chr14	+	192	1	Intergenic	novelGene_8798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	34358195	34358387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34358200_34358400
ES.10497.23	chr14	+	6247	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-49	0	intron_retention	FALSE	canonical	2	46	junction_5	241.869248901165	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395835	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.24	chr14	+	6391	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-49	0	intron_retention	FALSE	non_canonical	0	0	junction_5	321.966526900615	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395835	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444309_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461395_34463013_34463103_34466765_34466862_34467581
ES.10497.25	chr14	+	4410	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-48	0	intron_retention	FALSE	canonical	2	6	junction_2	244.809506442141	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34395836	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.27	chr14	+	6290	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-47	-7	intron_retention	FALSE	canonical	0	0	junction_10	247.927701817929	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395837	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.28	chr14	+	6275	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-47	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	239.556492334043	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTGTCTTTAACATA	NA	False	NA	12	True	AATAAA	-17	NA	34395837	34469938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395987_34396107_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.29	chr14	+	6382	19	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-45	-5	intron_retention	FALSE	canonical	0	0	junction_3	242.972214282992	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACGTTGTCTTTAAC	NA	False	NA	9	True	AATAAA	-14	NA	34395839	34469935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414701_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.32	chr14	+	7487	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-40	0	intron_retention	FALSE	canonical	3	756	junction_1	97.4498717733919	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGGTTGTTGTTCC	NA	False	NA	7	True	AATAAA	-19	NA	34395844	34468174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.34	chr14	+	4472	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-40	0	intron_retention	FALSE	canonical	2	46	junction_5	241.869248901165	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGGTTGTTGTTCC	NA	False	NA	7	True	AATAAA	-19	NA	34395844	34468174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.36	chr14	+	6404	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-36	-7	intron_retention	FALSE	canonical	0	0	junction_6	245.486139006756	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395848	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447060_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.37	chr14	+	6316	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_8	245.432781021607	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395848	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451207_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.38	chr14	+	4089	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-34	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	316.582644798565	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395850	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581_34467675_34469810
ES.10497.39	chr14	+	6044	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-34	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	318.247205723188	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395850	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34399327_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446764_34447886_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.4	chr14	+	6723	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-370	-2	-370	2	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCTTTAACATAAGTC	NA	False	NA	16	True	AATAAA	-21	NA	34395514	34469942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.40	chr14	+	5992	18	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-33	-7	intron_retention	FALSE	canonical	2	27	junction_1	320.137373195107	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395851	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396086_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.41	chr14	+	6355	19	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-33	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	298.447117759186	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395851	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453571_34455699_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.42	chr14	+	6213	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-33	0	intron_retention	FALSE	canonical	2	46	junction_5	302.196182755462	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395851	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.43	chr14	+	6347	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-33	-3	intron_retention	FALSE	canonical	0	0	junction_17	241.921474863229	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395851	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466799_34466862_34467581
ES.10497.44	chr14	+	6166	17	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-33	-3	intron_retention	FALSE	canonical	0	0	junction_3	257.082056148907	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395851	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.47	chr14	+	6251	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-32	-3	intron_retention	FALSE	non_canonical	0	0	junction_19	239.556492334043	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395852	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581_34468263_34468391
ES.10497.5	chr14	+	4686	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-95	1760	-95	4	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGTTGTTCCCTGAAC	NA	False	NA	13	True	AATAAA	-25	NA	34395789	34468180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.50	chr14	+	4493	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_1	239.556492334043	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34395854	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395984_34396107_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.51	chr14	+	4198	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-30	0	intron_retention	FALSE	canonical	2	6	junction_1	241.105613096557	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34395854	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395899_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.52	chr14	+	5857	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-29	-2	intron_retention	FALSE	canonical	0	0	junction_1	249.31672717615	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTGTCTTTAACATA	NA	False	NA	12	True	AATAAA	-17	NA	34395855	34469938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.54	chr14	+	7572	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-29	0	intron_retention	FALSE	canonical	3	148	junction_3	217.515238300064	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395855	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.55	chr14	+	5446	12	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-29	-7	intron_retention	FALSE	canonical	0	0	junction_11	282.352923756279	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395855	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34467581
ES.10497.56	chr14	+	6804	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-28	0	intron_retention	FALSE	canonical	3	756	junction_1	100.934148939521	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395856	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.57	chr14	+	4469	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_1	239.556492334043	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34395856	34468176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395968_34396113_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.58	chr14	+	4445	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-28	-3	intron_retention	FALSE	canonical	0	0	junction_14	252.011931941387	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTTTGGTTGTTGT	NA	False	NA	4	True	AATAAA	-16	NA	34395856	34468171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.6	chr14	+	4669	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-340	-144	-95	5	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTGTTCCCTGAACT	NA	False	NA	14	True	AATAAA	-26	NA	34395789	34468181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.60	chr14	+	1923	3	ISM	ENSMUSG00000041408.19	ENSMUST00000169910.8	4066	20	-221	53329	-27	-32206	5prime_fragment	FALSE	canonical	3	756	junction_1	78	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34395857	34414580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34396318_34398910_34399432_34413638
ES.10497.62	chr14	+	6320	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-27	-2	intron_retention	FALSE	canonical	0	0	junction_17	241.921474863229	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTGTCTTTAACATA	NA	False	NA	12	True	AATAAA	-17	NA	34395857	34469938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463107_34466825_34466862_34467581
ES.10497.63	chr14	+	4235	20	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	239.556492334043	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395857	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581_34467668_34469810
ES.10497.64	chr14	+	3314	18	NNC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-27	-2	intron_retention	FALSE	canonical	0	0	junction_2	249.911167608616	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395857	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.66	chr14	+	3955	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-20	-2	intron_retention	TRUE	canonical	0	0	junction_3	239.556492334043	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395864	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34413895_34414542_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.67	chr14	+	2803	6	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_3	398.019899000037	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395864	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34463013_34463103_34466765_34466862_34467581
ES.10497.69	chr14	+	9950	17	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	756	junction_1	100.101179282514	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395866	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765
ES.10497.7	chr14	+	4433	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-81	-1	intron_retention	FALSE	canonical	2	27	junction_1	236.581205227014	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTTTGGTTGTTGTTC	NA	False	NA	6	True	AATAAA	-18	NA	34395803	34468173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396086_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.70	chr14	+	6137	17	NIC	ENSMUSG00000041408.19	novel	4185	19	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	2	junction_9	315.056716124256	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395866	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.73	chr14	+	6372	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-17	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	323.68768764938	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395867	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447848_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461184_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.74	chr14	+	6401	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_13	245.617865397591	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395867	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459193_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.75	chr14	+	7513	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-16	-1146	-16	1146	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTTCTAAAATGTTTC	NA	False	NA	NA	False	CATAAA	-25	NA	34395868	34471086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.77	chr14	+	6358	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_17	319.588489262576	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395868	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466622_34466711_34467581
ES.10497.78	chr14	+	7984	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	756	junction_1	99.3686296950604	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395868	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34463103_34466765_34466862_34467581
ES.10497.79	chr14	+	6379	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_8	245.432781021607	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395868	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451124_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.8	chr14	+	5986	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-55	-1	intron_retention	FALSE	canonical	2	6	junction_1	241.105613096557	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395829	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395899_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.80	chr14	+	5600	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-15	-3	intron_retention	FALSE	non_canonical	0	0	junction_18	319.438072400216	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTTGTCTTTAACAT	NA	False	NA	11	True	AATAAA	-16	NA	34395869	34469937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34413848_34414542_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463125_34467575
ES.10497.83	chr14	+	4166	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-260	279	-15	-151	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGTTTGGATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	34395869	34467758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.85	chr14	+	4480	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-15	1	intron_retention	FALSE	canonical	2	32	junction_2	233.021083777337	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGGTTGTTGTTCCC	NA	False	NA	8	True	AATAAA	-20	NA	34395869	34468175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34399327_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.88	chr14	+	6224	20	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-12	0	intron_retention	FALSE	canonical	2	32	junction_2	290.361661961152	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395872	34469940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34399327_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.89	chr14	+	6170	20	NNC	ENSMUSG00000041408.19	novel	4066	20	NA	NA	-10	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	239.556492334043	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATACACACGTTGTCTT	NA	False	NA	5	True	AATAAA	-10	NA	34395874	34469931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34395966_34396147_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.9	chr14	+	5271	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	-55	1135	-55	629	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGGTTATACATTTTC	NA	False	NA	NA	False	NA	NA	NA	34395829	34468805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.92	chr14	+	4468	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	10	junction_3	247.800888369708	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTTTGGTTGTTGTTC	NA	False	NA	6	True	AATAAA	-18	NA	34395881	34468173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.93	chr14	+	4489	18	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_10	325.51343526772	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGGTTGTTGTTCC	NA	False	NA	7	True	AATAAA	-19	NA	34395881	34468174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461398_34463013_34463103_34466765_34466862_34467581
ES.10497.97	chr14	+	6296	20	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	239.556492334043	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTCTTTAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	34395884	34469939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581_34468339_34468392
ES.10497.98	chr14	+	6118	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	1	-7	intron_retention	FALSE	canonical	2	6	junction_2	244.809506442141	1243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	False	NA	7	True	AATAAA	-12	NA	34395885	34469933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_34396318_34398910_34399207_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10497.99	chr14	+	4470	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	252.769394472525	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTTTTGGTTGTTGTT	NA	False	NA	5	True	AATAAA	-17	NA	34395885	34468172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ES.10498.1	chr14	-	4085	8	NNC	ENSMUSG00000021798.15	novel	5119	14	NA	NA	21476	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.72554057547699	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTATTCTGTGTAAAG	NA	False	NA	NA	False	AATAAA	-31	NA	34277475	34248655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34270133_34270183_34274133_34274280_34277299
ES.10498.2	chr14	-	5041	14	Fusion	ENSMUSG00000021798.15_ENSMUSG00000021799.10	novel	5119	14	NA	NA	0	16	multi-exon	FALSE	canonical	0	0	junction_7	2.6779838746968	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATGGCGATGTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	34313796	34248665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34274133_34274280_34277299_34277486_34288813_34288851_34289354_34289525_34298942_34299302_34300551_34300628_34301132_34301285_34310333_34310453_34313704
ES.10498.3	chr14	-	2998	17	Fusion	ENSMUSG00000021798.15_ENSMUSG00000021799.10	novel	5119	14	NA	NA	4014	-111	multi-exon	FALSE	canonical	0	0	junction_7	2.51246890528022	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGACTCCCTAGCCATG	NA	False	NA	NA	False	AAGAAA	-40	NA	34317901	34251105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34274133_34274280_34277299_34277486_34288813_34288851_34289354_34289525_34298942_34299302_34300551_34300628_34301132_34301285_34310333_34310453_34314909_34315027_34315786_34315968_34316723_34316832_34317818
ES.10498.4	chr14	-	158	1	Intergenic	novelGene_8796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8460	False	NA	NA	False	NA	NA	NA	34302114	34301956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34302000_34302100
ES.10498.5	chr14	-	1391	5	ISM	ENSMUSG00000021799.10	ENSMUST00000168444.9	2075	10	3938	29	3938	-19	3prime_fragment	FALSE	canonical	0	0	junction_3	0.866025403784439	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	34317977	34312603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_34313288_34314909_34315027_34315786_34315968_34316723_34316832_34317676
ES.10498.6	chr14	-	1243	4	ISM	ENSMUSG00000021799.10	ENSMUST00000022331.3	2156	9	4178	18	3994	-18	3prime_fragment	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGTGCCTATGGAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	34317921	34314317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_34315027_34315786_34315968_34316723_34316832_34317676
ES.10499.1	chr14	-	170	1	Intergenic	novelGene_8797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAAGAAG	6975	False	NA	NA	False	NA	NA	NA	34356263	34356093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34356100_34356300
ES.105.1	chr1	-	154	2	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATATAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	13072000	13070971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13071075_13071949
ES.105.2	chr1	-	212	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAGTCCAGGACCCCCT	NA	False	NA	NA	False	NA	NA	NA	13071997	13071785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13071800_13072000
ES.1050.1	chr1	-	1966	1	Antisense	novelGene_ENSMUSG00000106302.3_AS_novelGene_ENSMUSG00000026275.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCAAAAAGACATAGGCCA	NA	False	NA	NA	False	NA	NA	NA	93274665	93272699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93272700_93274700
ES.1050.2	chr1	-	2491	5	Antisense	novelGene_ENSMUSG00000098689.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93281197	93272734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93274013_93278047_93278109_93278674_93278735_93279225_93279359_93280238
ES.10500.1	chr14	-	180	1	Intergenic	novelGene_8799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAAAAAAGGGAGAG	6171	False	NA	NA	False	NA	NA	NA	34373035	34372855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34372900_34373000
ES.10501.1	chr14	-	230	2	Intergenic	novelGene_8800	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGATTCATTTGTGCC	2418	False	NA	NA	False	NA	NA	NA	34458074	34393459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34393501_34457885
ES.10501.2	chr14	-	220	2	Intergenic	novelGene_8801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGGATTCATTTGTGC	2420	False	NA	NA	False	NA	NA	NA	34458072	34393460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34393494_34457885
ES.10501.3	chr14	-	700	1	FSM	ENSMUSG00000115007.2	ENSMUST00000228874.2	1299	1	-2	601	-2	-601	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGATGTTGGAGCTGTGG	8021	False	NA	NA	False	AATAAA	-16	NA	34395722	34395022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34395000_34395700
ES.10501.4	chr14	-	3829	1	Intergenic	novelGene_8802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCACAATCCAATTATTA	NA	False	NA	NA	False	NA	NA	NA	34407012	34403183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34403200_34407000
ES.10502.1	chr14	-	4715	1	Antisense	novelGene_ENSMUSG00000041408.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	34473509	34468794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_34468800_34473500
ES.10503.1	chr14	+	1384	1	Genic_Genomic	ENSMUSG00000097310.3	novel	NA	NA	NA	NA	8966	23	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGCTTACAGGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	34491149	34492533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_34491100_34492500
ES.10503.2	chr14	+	925	1	ISM	ENSMUSG00000097310.3	ENSMUST00000181044.2	3415	3	8999	403	8999	-403	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCACATGTATAAAACG	NA	False	NA	NA	False	AATAAA	-21	NA	34491182	34492107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_34491200_34492100
ES.10504.1	chr14	-	403	1	FSM	ENSMUSG00000115109.2	ENSMUST00000228194.2	1100	1	679	18	679	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTTACCTTGAATA	NA	False	NA	NA	False	AATAAA	-18	NA	34491333	34490930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_34490900_34491300
ES.10505.1	chr14	+	1359	3	Intergenic	novelGene_8808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	17	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGCAGTTTTTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	34496475	34500222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34496610_34498763_34498915_34499148
ES.10505.2	chr14	+	1382	4	Intergenic	novelGene_8809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	26.7124606795322	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGCTTGCAGTTTTTT	NA	False	NA	10	True	AATAAA	-10	NA	34496515	34500219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34496610_34498763_34498875_34498960_34499067_34499148
ES.10505.3	chr14	+	1255	3	Intergenic	novelGene_8810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	29.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCAGTTTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	34496542	34500225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_34496610_34498763_34498875_34499148
ES.10506.1	chr14	-	214	1	Intergenic	novelGene_8811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCCAAGGCTCAGGGGT	NA	False	NA	NA	False	NA	NA	NA	34892885	34892671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_34892700_34892900
ES.10507.1	chr14	-	177	1	Intergenic	novelGene_8812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTAACAAATCAA	NA	False	NA	NA	False	NA	NA	NA	35413603	35413426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_35413400_35413600
ES.10508.1	chr14	+	174	1	Intergenic	novelGene_8813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	35786697	35786871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_35786700_35786900
ES.10509.1	chr14	+	158	1	Intergenic	novelGene_8814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	35837652	35837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_35837700_35837800
ES.1051.1	chr1	+	2778	13	NNC	ENSMUSG00000034107.11	novel	3984	24	NA	NA	-7524	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCTCCGAGCCAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	93322058	93332025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93322203_93322269_93322408_93323008_93323108_93323186_93323274_93324998_93325111_93325353_93325409_93326806_93326905_93328165_93328297_93329152_93329359_93329482_93329626_93329858_93329950_93330362_93330483_93330671
ES.1051.2	chr1	+	2395	3	ISM	ENSMUSG00000034107.11	ENSMUST00000186641.7	3984	24	27622	0	-309	0	intron_retention	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCTCCGAGCCAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	93329273	93332025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93329359_93329482_93329626_93329858
ES.10510.1	chr14	+	2270	1	Intergenic	novelGene_8815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAATAAACAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	36642129	36644399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_36642100_36644400
ES.10511.1	chr14	+	168	1	Intergenic	novelGene_8816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	36670854	36671022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_36670900_36671000
ES.10512.1	chr14	+	2690	1	Intergenic	novelGene_8817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATGACTA	NA	False	NA	NA	False	NA	NA	NA	36684185	36686875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_36684200_36686900
ES.10513.1	chr14	-	7452	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-117	-1	-27	1	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCCACAGCTTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	36690761	36596891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.10	chr14	-	4185	12	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9905533060739	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTTGTCTCCACAGCT	NA	False	NA	NA	False	AATAAA	-24	NA	36690711	36596895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36597259_36600556_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.11	chr14	-	7332	12	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	27.9905533060739	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGCTTGTCTCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	36690709	36596899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36662239_36662383_36663222_36690498
ES.10513.12	chr14	-	7223	1	NIC	ENSMUSG00000058690.15	novel	7334	10	NA	NA	4193	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAAGTGTGCTTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	36604124	36596901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36596900_36604100
ES.10513.13	chr14	-	7514	11	NIC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	34	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.7070029369431	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAAGTGTGCTTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	36690700	36596901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36601720_36612250_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.14	chr14	-	4452	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	44	3013	44	891	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGGTTTCCTAAGTT	NA	False	NA	NA	False	TATAAA	-21	NA	36690690	36599905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.15	chr14	-	4379	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-70	3025	20	879	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAAGTCACTTTTTGG	NA	False	NA	NA	False	TATAAA	-44	NA	36690714	36599917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.16	chr14	-	3449	10	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	-44	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	23.3370367431389	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTCTTCCATTTTGTA	NA	False	NA	NA	False	ATTAAA	-20	NA	36690688	36600791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661798_36663222_36690498
ES.10513.17	chr14	-	3326	8	NIC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	20	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	25.4486277245203	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTCTTCCATTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	36690714	36600793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36601720_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.18	chr14	-	3453	10	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	34	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	23.247992081091	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTCTTCCATTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	36690700	36600793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640518_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.19	chr14	-	3559	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	45	3905	45	0	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTCTTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	36690689	36600797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.2	chr14	-	3883	11	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4688673501803	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690665	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36597259_36600730_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.20	chr14	-	3550	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	-121	3905	-31	0	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTCTTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	36690765	36600797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.21	chr14	-	3411	11	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.4688673501803	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTCTTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	36690709	36600797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36662449_36662531_36663222_36690498
ES.10513.22	chr14	-	4639	6	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	26	-5862	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	29.369371801249	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGGCTTTCCTGAGA	NA	False	NA	NA	False	AATAAA	-20	NA	36690708	36628608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36631170_36640390_36640518_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.23	chr14	-	4677	6	ISM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	20	31720	20	-5866	5prime_fragment	FALSE	canonical	3	53	junction_2	9.2	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTGCTGGCTTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	36690714	36628612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.24	chr14	-	3013	5	NIC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	42	-7345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.9232921921325	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTGATAATTGTGCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	36690692	36630091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36631170_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.3	chr14	-	7374	10	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	23.3370367431389	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690714	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661798_36663222_36690498
ES.10513.4	chr14	-	4108	11	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4688673501803	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690716	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36597259_36600556_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.5	chr14	-	7537	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	-28	0	-28	0	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690762	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.6	chr14	-	4026	12	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7729548697792	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690759	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36597259_36600730_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640518_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.7	chr14	-	7389	10	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	23.247992081091	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690735	36596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640518_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.8	chr14	-	7474	11	NNC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.743868911474	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCTCCACAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	36690714	36596894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36643537_36643610_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10513.9	chr14	-	7312	9	NIC	ENSMUSG00000058690.15	novel	7509	11	NA	NA	20	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.6119889484779	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCTCCACAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	36690714	36596894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36601720_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ES.10514.1	chr14	-	4167	16	NIC	ENSMUSG00000021803.11	novel	4332	17	NA	NA	73	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	5.55937646383717	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTCCCGGTCCTCTTG	NA	False	NA	NA	False	AATAAA	-22	NA	36820231	36799809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36820045
ES.10514.2	chr14	-	4318	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	18	-4	18	4	multi-exon	TRUE	canonical	2	4	junction_16	5.32351798625683	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTCCCGGTCCTCTTG	NA	False	NA	NA	False	AATAAA	-22	NA	36820286	36799809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ES.10514.5	chr14	-	4199	16	NNC	ENSMUSG00000021803.11	novel	4332	17	NA	NA	66	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	4.06283972938469	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGACCTCCCGGTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	36820238	36799812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36811002_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36820045
ES.10514.7	chr14	-	6079	15	NIC	ENSMUSG00000021803.11	novel	4332	17	NA	NA	74	-1	intron_retention	FALSE	canonical	3	8	junction_3	5.26443593505379	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGACCTCCCGGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	36820230	36799814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36818300_36819218
ES.10514.8	chr14	-	2699	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	74	1559	74	-1559	multi-exon	FALSE	canonical	2	4	junction_16	5.32351798625683	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATCTAGAGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	36820230	36801372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ES.10514.9	chr14	-	169	1	Intergenic	novelGene_8818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTACGACCTTAGCC	NA	False	NA	NA	False	NA	NA	NA	36819796	36819627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_36819600_36819800
ES.10515.1	chr14	-	1721	10	Fusion	ENSMUSG00000096001.3_ENSMUSG00000041028.17	novel	1102	6	NA	NA	-23	-6	multi-exon	FALSE	canonical	2	3	junction_2	2279.6872592529	2056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTATGCCTGGAGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	36857252	36824104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_36824649_36829330_36829412_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.10	chr14	-	3015	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-45	218	-25	-218	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTACACACATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	36857254	36842266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.11	chr14	-	1522	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-265	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	1819.95631815711	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGGTGTTGGGTAGAA	NA	False	NA	NA	False	TATAAA	-15	NA	36857252	36842313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36842740_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.12	chr14	-	2906	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-63	345	-43	-345	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTATTGTTTTCAGTAAC	NA	False	NA	43	True	CATAAA	-29	NA	36857272	36842393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.14	chr14	-	2930	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	13	-370	13	-362	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTGAAAACTTAAAAGAC	NA	False	NA	26	True	CATAAA	-12	NA	36857083	36842410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ES.10515.15	chr14	-	5735	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-8	336	intron_retention	FALSE	canonical	3	4955	junction_3	355.695581837581	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTTTAGTCTCCAT	NA	False	NA	-8	True	AGTAAA	-20	NA	36857219	36842444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.16	chr14	-	2820	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-25	334	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_8	1759.69576560836	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTCTTTAGTCTCC	NA	False	NA	-10	True	AGTAAA	-18	NA	36857254	36842446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857166
ES.10515.17	chr14	-	5461	1	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	9189	334	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2053	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTCTTTAGTCTCC	NA	False	NA	-10	True	AGTAAA	-18	NA	36847907	36842446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36842400_36847900
ES.10515.18	chr14	-	3403	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	334	intron_retention	FALSE	canonical	3	4955	junction_3	274.730888733848	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTCTTTAGTCTCC	NA	False	NA	-10	True	AGTAAA	-18	NA	36857252	36842446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.19	chr14	-	1392	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-26	334	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	1819.95631815711	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTCTTTAGTCTCC	NA	False	NA	-10	True	AGTAAA	-18	NA	36857255	36842446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36842740_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.2	chr14	-	2000	10	Fusion	ENSMUSG00000096001.3_ENSMUSG00000041028.17	novel	1102	6	NA	NA	-28	-7	multi-exon	FALSE	canonical	2	3	junction_2	2551.02324180845	2056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACTATGCCTGGAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	36857124	36824105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_36824649_36829330_36829412_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856743
ES.10515.21	chr14	-	2555	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-83	716	-63	16	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCTCCCTGATACG	NA	False	NA	-2	True	AATAAA	-27	NA	36857292	36842764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.22	chr14	-	3489	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	9	intron_retention	FALSE	canonical	1	1	junction_4	2345.62875033007	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTACTTTTTTCTCCC	NA	False	NA	-9	True	AATAAA	-20	NA	36857252	36842771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36848458_36848680_36849543_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.23	chr14	-	2808	9	NIC	ENSMUSG00000041028.17	novel	2573	9	NA	NA	-50	7	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	1786.95934131138	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857146	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856743
ES.10515.25	chr14	-	2498	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	7	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	1786.95934131138	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857252	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857151
ES.10515.26	chr14	-	2607	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	-27	-7	-27	7	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857123	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ES.10515.3	chr14	-	4282	1	NIC	ENSMUSG00000096001.3	novel	705	3	NA	NA	3670	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACTATGCCTGGAGC	NA	False	NA	NA	False	AATAAA	-13	NA	36828388	36824106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36824100_36828400
ES.10515.30	chr14	-	5352	6	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-43	7	intron_retention	FALSE	canonical	3	4955	junction_2	316.602590008357	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857272	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.31	chr14	-	2495	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1816.792877401	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857223	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848066_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.32	chr14	-	2520	9	NNC	ENSMUSG00000041028.17	novel	2573	9	NA	NA	42	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1794.42713264568	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857054	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855743_36856921
ES.10515.33	chr14	-	3035	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	0	7	intron_retention	FALSE	canonical	3	4955	junction_3	274.730888733848	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857211	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.34	chr14	-	5438	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-22	7	intron_retention	FALSE	canonical	3	4955	junction_3	355.695581837581	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857251	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.35	chr14	-	2868	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	7	intron_retention	FALSE	canonical	3	4955	junction_4	388.751743876921	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857252	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855761_36857151
ES.10515.36	chr14	-	3273	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-30	7	intron_retention	FALSE	canonical	3	4955	junction_4	391.517143263724	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857259	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.37	chr14	-	2460	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1794.42713264568	2055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857221	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857158
ES.10515.38	chr14	-	4049	8	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1937.79902498285	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857237	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36851013_36853154_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.39	chr14	-	3984	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-5	7	intron_retention	FALSE	canonical	3	4955	junction_3	391.483520647773	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857234	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.4	chr14	-	6144	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-25	-2931	-5	2931	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTTCTGAGAAGTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	36857234	36839117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.40	chr14	-	4762	7	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	7	intron_retention	FALSE	canonical	3	4955	junction_3	422.789545755332	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTACTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	36857252	36842773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.41	chr14	-	5031	5	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	3532	6	intron_retention	FALSE	canonical	3	4973	junction_1	394.465698762262	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCTGTACTTTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	36853564	36842774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36852735_36853494
ES.10515.43	chr14	-	2506	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-15	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1827.1261544773	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCTGTACTTTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	36857244	36842774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853616_36855127_36855228_36855589_36855761_36857151
ES.10515.44	chr14	-	4542	7	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	6	6	intron_retention	FALSE	canonical	3	4955	junction_2	294.880437164323	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCTGTACTTTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	36857223	36842774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.46	chr14	-	2467	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	438	5	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_8	1773.32554822853	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGCTGTACTTTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	36856658	36842775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856594
ES.10515.48	chr14	-	7267	7	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-8	5	intron_retention	FALSE	canonical	1	56	junction_2	2049.89908288189	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGCTGTACTTTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	36857237	36842775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36847289_36847858_36848048_36848458_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.49	chr14	-	2483	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1794.42713264568	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGCTGTACTTTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	36857249	36842775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855743_36857151
ES.10515.5	chr14	-	3493	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-43	-262	-23	262	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGCAAACACCTTTGT	NA	False	NA	NA	False	NA	NA	NA	36857252	36841786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.50	chr14	-	2484	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_8	1759.69576560836	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGCTGTACTTTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	36857247	36842775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857166
ES.10515.51	chr14	-	9060	5	NNC	ENSMUSG00000041028.17	novel	601	4	NA	NA	-23	4	intron_retention	FALSE	non_canonical	0	0	junction_1	2362.39575166821	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATTGCTGTACTTTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	36857252	36842776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36851013_36853154_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.53	chr14	-	2222	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1817.11680967405	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857211	36842780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36847883_36849614_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.54	chr14	-	2483	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	74	junction_1	1804.35168412369	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857254	36842780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847134_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.55	chr14	-	1616	3	NNC	ENSMUSG00000041028.17	novel	2573	9	NA	NA	9203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2486.5	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36847893	36842780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847295_36847858
ES.10515.56	chr14	-	2484	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1764.91145316132	2054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTATTGCTGTACT	NA	False	NA	-19	True	AATAAA	-10	NA	36857257	36842781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847877_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.57	chr14	-	1544	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-78	1722	-58	-990	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGAAGCCTGCAGAATA	NA	False	NA	-5	True	AGTAAA	-27	NA	36857287	36843770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.58	chr14	-	7610	2	NNC	ENSMUSG00000041028.17	novel	1102	6	NA	NA	4837	-1005	intron_retention	FALSE	canonical	1	1	junction_1	0	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTGTCTTCATATTGTG	NA	False	NA	-20	True	AGTAAA	-12	NA	36852259	36843785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36848680_36849543
ES.10515.59	chr14	-	4407	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-7	-1009	intron_retention	FALSE	canonical	3	4955	junction_3	355.695581837581	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCGTGTCTTCATAT	NA	False	NA	-24	True	AGTAAA	-8	NA	36857236	36843789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.6	chr14	-	3358	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-44	-126	-24	126	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTTTTAGGCAAGACT	NA	False	NA	NA	False	AATAAA	-17	NA	36857253	36841922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.60	chr14	-	1571	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	-39	1041	-39	-1041	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTATGTATTGGATAA	NA	False	NA	-3	True	AATATA	-20	NA	36857135	36843821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ES.10515.61	chr14	-	5147	7	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-18	-1047	intron_retention	FALSE	canonical	3	4973	junction_1	380.052481755992	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATTGTTTTATGTATT	NA	False	NA	-9	True	AATATA	-14	NA	36857247	36843827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.62	chr14	-	1472	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-116	1832	-96	-1100	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTAAAACTGCTTTGA	NA	False	NA	-11	True	AATAAA	-45	NA	36857325	36843880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.63	chr14	-	1408	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-17	-1119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1810.12354550732	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTCTTATGCTTTCA	NA	False	NA	-30	True	AATAAA	-26	NA	36857246	36843899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855262_36855589_36855761_36857151
ES.10515.64	chr14	-	8529	4	NIC	ENSMUSG00000041028.17	novel	1102	6	NA	NA	-23	-1120	intron_retention	FALSE	canonical	3	4955	junction_1	236.051312689047	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATCTCTTATGCTTTC	NA	False	NA	-31	True	AATAAA	-25	NA	36857252	36843900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36849653_36852592_36853607_36855127_36855228_36855589
ES.10515.65	chr14	-	3290	6	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-13	-1123	intron_retention	FALSE	canonical	2	6	junction_2	2141.31243866933	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCATCTCTTATGCT	NA	False	NA	-34	True	AATAAA	-22	NA	36857242	36843903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36849653_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.66	chr14	-	6553	6	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-11	-1123	intron_retention	FALSE	canonical	3	4955	junction_2	418.258962844791	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCATCTCTTATGCT	NA	False	NA	-34	True	AATAAA	-22	NA	36857240	36843903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.67	chr14	-	4284	8	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-7	-1124	intron_retention	FALSE	canonical	1	23	junction_7	1906.26204378932	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCATCTCTTATGC	NA	False	NA	-35	True	AATAAA	-21	NA	36857236	36843904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857151
ES.10515.68	chr14	-	1357	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-1127	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_8	1759.69576560836	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857252	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857166
ES.10515.69	chr14	-	4944	6	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-8	-1127	intron_retention	FALSE	canonical	3	4955	junction_2	304.312076658157	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857237	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36849653_36852592_36852735_36853494_36855228_36855589_36855761_36857151
ES.10515.7	chr14	-	3324	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	-19	-732	-19	0	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTAGTTGGGTAGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	36857115	36842048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ES.10515.70	chr14	-	1364	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-1127	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	1786.95934131138	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857252	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857151
ES.10515.71	chr14	-	4151	7	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-11	-1127	intron_retention	FALSE	canonical	2	6	junction_3	2086.51826548972	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857240	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.73	chr14	-	4308	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-26	-1127	intron_retention	FALSE	canonical	3	4955	junction_3	355.695581837581	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857255	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.74	chr14	-	1568	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-1127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1828.66440332829	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857252	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849849_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.75	chr14	-	1354	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-1127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1794.42713264568	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857252	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855743_36857151
ES.10515.76	chr14	-	1364	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-23	-1127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1827.1261544773	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857252	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855135_36855228_36855589_36855761_36857151
ES.10515.77	chr14	-	1211	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	3	-1127	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1827.43518609416	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857226	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844049_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.79	chr14	-	2114	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-5	-1127	intron_retention	FALSE	canonical	3	4955	junction_4	391.517143263724	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857234	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.8	chr14	-	3210	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-28	6	-8	-6	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTACTTAGTTGGG	NA	False	NA	NA	False	AATAAA	-19	NA	36857237	36842054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.81	chr14	-	1299	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-51	-1127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1794.42713264568	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857280	36843907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857252
ES.10515.83	chr14	-	10074	4	FSM	ENSMUSG00000041028.17	ENSMUST00000223921.2	601	4	-28	-9445	-28	-1129	multi-exon	FALSE	canonical	3	5046	junction_1	285.925786797126	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATATTTTCATCTCT	NA	False	NA	-40	True	AATAAA	-16	NA	36857257	36843909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.84	chr14	-	1312	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-1	-1134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1764.91145316132	2025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCCAAATATATTTTCA	NA	False	NA	-45	True	AATAAA	-11	NA	36857210	36843914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36844184_36847116_36847289_36847869_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.85	chr14	-	1162	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-2	2028	0	-1296	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGATGTCTTGCTTG	NA	False	NA	NA	False	AAGAAA	-26	NA	36857211	36844076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.86	chr14	-	2673	8	ISM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-64	3512	-44	-2780	5prime_fragment	FALSE	canonical	3	4955	junction_3	355.695581837581	2013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTTGGTTAATTGTTT	NA	False	NA	NA	False	NA	NA	NA	36857273	36845560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10515.87	chr14	-	488	5	NNC	ENSMUSG00000041028.17	novel	601	4	NA	NA	-25	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2362.39575166821	1948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCGTCTCTAGTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	36857254	36853432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_36853607_36855127_36855228_36855589_36855668_36855727_36855761_36857151
ES.10515.9	chr14	-	6114	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	4955	junction_3	355.695581837581	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATAAAATGTACTTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	36857212	36842058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ES.10516.1	chr14	+	159	1	Intergenic	novelGene_8819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	36865339	36865498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_36865300_36865500
ES.10517.1	chr14	+	177	1	Intergenic	novelGene_8820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	37450172	37450349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_37450200_37450300
ES.10518.1	chr14	-	179	1	Intergenic	novelGene_8821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTAGTAATTATAT	NA	False	NA	NA	False	NA	NA	NA	38384836	38384657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_38384700_38384800
ES.10519.1	chr14	+	178	1	Intergenic	novelGene_8822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCACTATTTCG	2235	False	NA	NA	False	NA	NA	NA	39222375	39222553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_39222400_39222600
ES.1052.1	chr1	-	177	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAATCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	93328006	93327829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93327800_93328000
ES.10520.1	chr14	+	2035	2	Intergenic	novelGene_8823	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAGATAAATGCGAA	NA	False	NA	NA	False	AATAAA	-17	NA	40171748	40179732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40172121_40178069
ES.10521.1	chr14	+	4604	1	Intergenic	novelGene_8824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCGAATCCAAGAACACA	NA	False	NA	NA	False	NA	NA	NA	40268634	40273238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40268600_40273200
ES.10522.1	chr14	+	195	1	Intergenic	novelGene_8825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTTAATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	40431515	40431710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40431500_40431700
ES.10523.1	chr14	-	3461	1	Intergenic	novelGene_8826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTGTGTCTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	40529010	40525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40525500_40529000
ES.10524.1	chr14	+	1681	1	Intergenic	novelGene_8828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACTAAACTAACATTC	NA	False	NA	NA	False	NA	NA	NA	40602197	40603878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40602200_40603900
ES.10525.1	chr14	+	3137	1	Intergenic	novelGene_8829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATGGA	NA	False	NA	NA	False	NA	NA	NA	40616527	40619664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40616500_40619700
ES.10526.1	chr14	-	5974	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-789	2268	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	6.40190401365094	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCCTCCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	40616012	40533477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615685
ES.10526.11	chr14	-	5769	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-160	2259	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	8.16911102874725	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATAAAGGAATGGCCTC	NA	False	NA	NA	False	AATAAA	-12	NA	40615383	40533486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615252
ES.10526.12	chr14	-	3507	8	FSM	ENSMUSG00000037833.15	ENSMUST00000096000.4	1597	8	175	-2085	175	6	multi-exon	FALSE	canonical	3	14	junction_2	5.69998209807429	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGTGTTCTGGACTTG	NA	False	NA	NA	False	TATAAA	-17	NA	40615048	40535739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738
ES.10526.13	chr14	-	2497	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-704	960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.94427190999916	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATGGCTTCAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	40615927	40536864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615690
ES.10526.14	chr14	-	3590	10	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-748	436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.3064165558269	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACCAGGCTTGTGACTA	NA	False	NA	NA	False	CATAAA	-13	NA	40615971	40537388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40574911_40576480_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615685
ES.10526.15	chr14	-	5411	1	Intergenic	novelGene_8827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGTGTTAATCAACAT	NA	False	NA	NA	False	AATAAA	-13	NA	40561853	40556442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40556400_40561900
ES.10526.16	chr14	-	864	4	NNC	ENSMUSG00000037833.15	novel	1150	4	NA	NA	19129	6370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.142135623731	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCTTTGGTTAACTTC	NA	False	NA	NA	False	NA	NA	NA	40596094	40575969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40576480_40582548_40582697_40594486_40594635_40596036
ES.10526.17	chr14	-	3624	6	NNC	ENSMUSG00000037833.15	novel	1150	4	NA	NA	-5582	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2245654319489	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCCAATAATTTCCTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	40620805	40582335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40582697_40593137_40593496_40594486_40594635_40596036_40596197_40614738_40617176_40620645
ES.10526.18	chr14	-	10410	6	NNC	ENSMUSG00000037833.15	novel	1150	4	NA	NA	-9005	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.8995798245148	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTGCCAATAATTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	40624228	40582338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40582697_40593137_40593496_40594486_40594635_40596036_40596197_40614738_40614927_40615030
ES.10526.19	chr14	-	1129	5	NNC	ENSMUSG00000037833.15	novel	1150	4	NA	NA	-746	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	7.91754381105656	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTACTGAGTTGCCA	NA	False	NA	NA	False	ATTAAA	-6	NA	40615969	40582347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615685
ES.10526.3	chr14	-	8067	10	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-2524	2268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.83735058895475	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCCTCCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	40617747	40533477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40593137_40593496_40594486_40594635_40596036_40596197_40614738_40614927_40615685
ES.10526.4	chr14	-	5970	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-130	2268	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	8.42244026396151	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCCTCCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	40615353	40533477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615030
ES.10526.5	chr14	-	5744	8	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	1380	2268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3137084989848	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCCTCCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	40613843	40533477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40540380_40540520_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40613537
ES.10526.7	chr14	-	5683	8	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	838	2262	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	8.99886614172778	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGCCTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	40614385	40533483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614155
ES.10526.8	chr14	-	5797	9	NNC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-159	2261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.94427190999916	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAATGGCCTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	40615382	40533484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40582548_40582697_40594486_40594635_40596036_40596197_40614738_40614927_40615225
ES.10526.9	chr14	-	5073	5	NIC	ENSMUSG00000037833.15	novel	1597	8	NA	NA	-19301	2261	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	7.39932429347437	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAATGGCCTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	40594563	40533484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40594486
ES.10527.1	chr14	+	1799	1	Antisense	novelGene_ENSMUSG00000037824.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCCAAACAACAGCATTAA	NA	False	NA	NA	False	NA	NA	NA	40626660	40628459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_40626700_40628500
ES.10528.1	chr14	+	4596	2	Antisense	novelGene_ENSMUSG00000037824.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	40647778	40652420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_40648890_40648935
ES.10529.1	chr14	-	5859	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-65	-3319	-65	3319	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAAGGTGCCTCAGTAT	NA	False	NA	NA	False	AATAAA	-26	NA	40688829	40625082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.10	chr14	-	2344	10	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-136	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.869663035413	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688900	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40628618_40628864_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.11	chr14	-	1963	8	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-142	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.562068143709	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688906	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40629573_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.12	chr14	-	2869	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	25	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	215.771870270432	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688739	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688293
ES.10529.13	chr14	-	2547	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	3081	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	215.771870270432	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40685683	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40685559
ES.10529.14	chr14	-	2536	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-179	-18	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	223.728607459838	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688943	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40688732
ES.10529.15	chr14	-	2306	7	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-148	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	241.915733721935	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688912	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.18	chr14	-	4443	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-152	-74	intron_retention	FALSE	canonical	3	610	junction_1	28.4346727121115	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688916	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.19	chr14	-	2478	10	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-44	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	267.721985889084	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688808	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40645243_40645279_40656144_40656243_40688732
ES.10529.2	chr14	-	5200	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-65	-2660	-65	2660	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAAAGTATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	40688829	40625741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.20	chr14	-	2415	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	7336	-74	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_8	215.11435912091	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40681428	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40681380
ES.10529.21	chr14	-	2413	7	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-163	-74	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	237.969477501259	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688927	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40688732
ES.10529.22	chr14	-	7805	4	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-51	-74	intron_retention	FALSE	canonical	2	13	junction_3	288.254902627672	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688815	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40637508_40638759_40638907_40688732
ES.10529.23	chr14	-	2545	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-152	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	215.771870270432	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688916	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688738
ES.10529.25	chr14	-	1960	5	NNC	ENSMUSG00000037824.7	novel	2477	8	NA	NA	20489	-74	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	284.033448734476	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40635784	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40635724
ES.10529.26	chr14	-	2539	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-125	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	214.050811724693	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688889	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633130_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.27	chr14	-	2560	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-47	-74	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	213.512294727962	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTTGTTTGGGTCTT	NA	False	NA	-27	True	AATATA	-11	NA	40688811	40628477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637222_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.28	chr14	-	2112	6	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-83	-75	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	259.261721046513	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTGTTGTTTGGGTCT	NA	False	NA	-28	True	AATATA	-10	NA	40688847	40628478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40656144_40656243_40688732
ES.10529.29	chr14	-	4679	3	NNC	ENSMUSG00000037824.7	novel	2477	8	NA	NA	21466	-82	intron_retention	TRUE	canonical	0	0	junction_2	305	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTAATGCTGTTGTT	NA	False	NA	-35	True	AATATA	-3	NA	40634807	40628485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40634407_40634594
ES.10529.3	chr14	-	4316	1	Genic_Genomic	ENSMUSG00000037824.7	novel	NA	NA	NA	NA	25299	1743	mono-exon	FALSE	NA	NA	NA	NA	NA	548	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCATAGCGTCAGACAT	NA	False	NA	NA	False	NA	NA	NA	40630974	40626658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_40626700_40631000
ES.10529.30	chr14	-	1648	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-54	881	-54	-879	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCATAGCCTCTTCCGT	NA	False	NA	NA	False	NA	NA	NA	40688818	40629282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.31	chr14	-	1125	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-37	1387	-37	-1385	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTTTATGTGGA	NA	False	NA	NA	False	NA	NA	NA	40688801	40629788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.32	chr14	-	1529	3	ISM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-175	11012	-175	-2216	5prime_fragment	FALSE	canonical	3	610	junction_2	25.5	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGTTGTCCCTAGCC	NA	False	NA	NA	False	AATAAA	-12	NA	40688939	40639413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_40640638_40656144_40656243_40688732
ES.10529.4	chr14	-	3702	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-72	-1155	-72	1155	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCGAGAAAGCCATATTC	NA	False	NA	NA	False	AATAAA	-21	NA	40688836	40627246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.5	chr14	-	2915	10	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-143	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	266.278096529471	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTCAGGTGTGACT	NA	False	NA	68	True	ATTAAA	-37	NA	40688907	40628382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40640831_40641110_40656144_40656243_40688732
ES.10529.6	chr14	-	2729	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	-237	-17	-237	17	multi-exon	FALSE	canonical	3	610	junction_1	26.6868413267663	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTGAGTCAGGTGTGA	NA	False	NA	66	True	ATTAAA	-35	NA	40689001	40628384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.7	chr14	-	3399	9	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-28	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	215.771870270432	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAGCCACTGAGTCAG	NA	False	NA	60	True	ATTAAA	-29	NA	40688792	40628390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40687847
ES.10529.8	chr14	-	4711	8	NIC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-34	0	intron_retention	FALSE	canonical	3	610	junction_1	28.2272122287002	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTGGTGATAAATTGA	NA	False	NA	47	True	ATTAAA	-16	NA	40688798	40628403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40630087_40631541_40631662_40633069_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ES.10529.9	chr14	-	2815	11	NNC	ENSMUSG00000037824.7	novel	2475	9	NA	NA	-59	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	297.342294334324	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAAGCATTAAGC	NA	False	NA	29	True	NA	NA	NA	40688823	40628421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40667145_40667204_40671350_40671594_40688732
ES.1053.1	chr1	+	2026	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGTATGAAAACAACATCAA	NA	False	NA	NA	False	AAAAAG	-5	NA	93359556	93361582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93359600_93361600
ES.10530.1	chr14	+	1115	2	Intergenic	novelGene_8830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGTGTGTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	40698906	40700068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40699074_40699120
ES.10530.2	chr14	+	6921	1	Intergenic	novelGene_8831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAATGTGCCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	40699104	40706025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40699100_40706000
ES.10531.1	chr14	-	2790	5	FSM	ENSMUSG00000021792.16	ENSMUST00000153830.8	1003	5	-402	-1385	44	599	multi-exon	FALSE	canonical	3	270	junction_1	30.6706292729706	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCATTCTGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	40726892	40715097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997
ES.10531.10	chr14	-	1508	6	NNC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.409967446343	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735714	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40716595_40719669_40719835_40720800_40720928_40724392_40724485_40725997_40726161_40735654
ES.10531.11	chr14	-	1656	6	NIC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	-14	3	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	123.38816799029	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735759	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735582
ES.10531.12	chr14	-	1498	7	NNC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.888505831757	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735739	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40716145_40716193_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ES.10531.2	chr14	-	168	1	Intergenic	novelGene_8832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40715529	40715361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40715400_40715500
ES.10531.3	chr14	-	1648	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	-62	-19	-62	19	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTCTTGTCCTTGTT	NA	False	NA	-3	True	AATAAA	-30	NA	40735807	40715677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
ES.10531.4	chr14	-	1589	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	-49	-3	-36	3	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735781	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ES.10531.5	chr14	-	1683	7	NNC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.734672745568	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735737	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40716595_40719241_40719363_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
ES.10531.6	chr14	-	1483	7	NNC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.888505831757	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735751	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40716595_40719669_40719699_40719774_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ES.10531.7	chr14	-	7568	5	FSM	ENSMUSG00000021792.16	ENSMUST00000153830.8	1003	5	-5776	-789	-2043	3	multi-exon	FALSE	canonical	3	270	junction_1	30.6706292729706	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40732266	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997
ES.10531.8	chr14	-	1454	5	NIC	ENSMUSG00000021792.16	novel	1003	5	NA	NA	-5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	138.539705499904	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735737	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40735582
ES.10531.9	chr14	-	1616	6	NIC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	-4	3	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	120.659852477947	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTCTGTGCACAAGT	NA	False	NA	-19	True	AATAAA	-14	NA	40735736	40715693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735582
ES.10532.1	chr14	-	171	1	Intergenic	novelGene_8833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAGTAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	40769012	40768841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40768800_40769000
ES.10533.1	chr14	-	849	5	NNC	ENSMUSG00000021791.8	novel	818	4	NA	NA	-3857	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTGAAGCCTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	40795022	40771075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_40771408_40783851_40783975_40784305_40784462_40791493_40791545_40794835
ES.10534.1	chr14	-	159	1	Intergenic	novelGene_8834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	40803542	40803383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40803400_40803500
ES.10535.1	chr14	-	237	1	Intergenic	novelGene_8835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAGGATCCAGGTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	40851611	40851374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_40851400_40851600
ES.10536.1	chr14	+	198	1	Intergenic	novelGene_8836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAATATATTTATATATT	NA	False	NA	NA	False	NA	NA	NA	40888396	40888594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_40888400_40888600
ES.10537.1	chr14	+	2080	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-61824	-338	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_4	8.12403840463596	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40938937	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40939274_40986925_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.10	chr14	+	3348	8	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14066	-330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.27832182540024	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	40986695	41010442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986778_40986911_40987404_40998200_40999591_41000807_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.11	chr14	+	1944	7	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14066	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.65216018883266	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40986695	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986825_40986925_40987404_40998230_40998303_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.12	chr14	+	2185	7	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14066	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.1325819325039	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40986695	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_40998200_40998303_41000807_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.13	chr14	+	4577	7	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14039	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.1325819325039	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40986722	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986824_40986910_40987404_40998200_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.14	chr14	+	2183	8	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-308204	-338	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.53085635819064	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40986963	41302924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_41068056_41068130_41293748_41294008_41295213_41295362_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.15	chr14	+	2162	8	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-308191	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.99489633121898	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40986976	41302924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_41068026_41068130_41293748_41294008_41295213_41295324_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.16	chr14	+	2153	8	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-308182	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.29556065197599	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40986985	41302924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_41292619_41292723_41293748_41294008_41295213_41295324_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.17	chr14	+	3043	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-13776	-339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.35703296631047	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40986985	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_40998230_40999591_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.18	chr14	+	1589	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-13761	-338	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.19178633370093	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40987000	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_40998200_40998303_41001646_41001810_41002809_41002942_41009645
ES.10537.19	chr14	+	1846	7	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-308134	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.38152730712011	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40987033	41302924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_41068026_41068130_41295213_41295324_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.2	chr14	+	1906	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-61824	-330	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	5.30919014539883	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	40938937	41010442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40939274_40986925_40987404_41001646_41001810_41002809_41002942_41009645
ES.10537.20	chr14	+	2824	7	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-13443	-335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.13770374382247	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCACTCTTAAGAAACCT	NA	False	NA	NA	False	AATAAA	-16	NA	40987318	41010437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40987404_40998230_40999591_41000807_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.21	chr14	+	8394	4	NIC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-6236	-331	intron_retention	FALSE	canonical	3	3	junction_2	9.2736184954957	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	40994525	41010441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.22	chr14	+	4744	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-4539	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.90842298052804	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40996222	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40999591_41000807_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.23	chr14	+	2287	7	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-3104	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.91471941354422	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTAAGAAACCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	40997657	41010441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40998303_40999331_40999591_41000807_41000918_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.24	chr14	+	4561	3	NIC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-2592	-338	intron_retention	FALSE	canonical	3	6	junction_1	4.5	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	40998169	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_41001810_41002809_41002942_41009645
ES.10537.25	chr14	+	2891	3	NIC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	260	-338	intron_retention	FALSE	canonical	3	3	junction_1	10.5	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41001021	41010434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_41002942_41003619_41003802_41009645
ES.10537.26	chr14	+	1542	1	Intergenic	novelGene_8837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGCACAGCGTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	41020411	41021953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41020400_41022000
ES.10537.27	chr14	+	2026	9	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-271441	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.70957197255464	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	41023726	41302923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41023853_41257593_41257738_41292619_41292723_41293748_41294008_41295191_41295324_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.28	chr14	+	2146	9	NNC	ENSMUSG00000079266.3	novel	461	3	NA	NA	-215444	12874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.53602571593056	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGCTGTTAAAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	41023729	41254046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41023853_41027141_41027295_41089911_41090056_41239174_41239307_41240202_41240335_41241014_41241196_41242019_41242111_41252647_41252702_41252910
ES.10537.29	chr14	+	1538	6	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-271438	-330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.06862723900371	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	41023729	41302932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41023853_41257593_41257738_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.3	chr14	+	1576	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-61815	-339	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.24819974072532	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40938946	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40939274_40998230_40998303_41000807_41000918_41001646_41001810_41002809_41002942_41009661
ES.10537.30	chr14	+	1668	8	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-271437	-330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.27832182540024	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	41023730	41302932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41023853_41257593_41257738_41292619_41292723_41293748_41293777_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.31	chr14	+	1600	7	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-271435	-338	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.72576007513895	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41023732	41302924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41023853_41257593_41257738_41292649_41292723_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.32	chr14	+	178	1	Intergenic	novelGene_8838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATGAAGTACA	NA	False	NA	NA	False	NA	NA	NA	41045656	41045834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41045700_41045800
ES.10537.33	chr14	+	1046	2	Antisense	novelGene_ENSMUSG00000092142.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGGTAAAGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	41058645	41153327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41058727_41152362
ES.10537.34	chr14	+	908	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGTCAAGAGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	41085316	41102145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41085450_41089611_41090056_41101814
ES.10537.35	chr14	+	1025	3	Antisense	novelGene_ENSMUSG00000091847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	5	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTATGATCCATTTC	NA	False	NA	NA	False	NA	NA	NA	41085324	41102270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41085450_41089611_41090056_41101814
ES.10537.36	chr14	+	1268	3	Antisense	novelGene_ENSMUSG00000092142.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	18	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTTGACAATGGTAA	NA	False	NA	NA	False	NA	NA	NA	41085325	41153318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41085450_41089611_41090056_41152618
ES.10537.37	chr14	+	158	1	Intergenic	novelGene_8839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAATAGATCTTTAA	833	False	NA	NA	False	NA	NA	NA	41107686	41107844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41107700_41107800
ES.10537.38	chr14	+	4664	1	Antisense	novelGene_ENSMUSG00000091131.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATAATTAAAATATATT	1411	False	NA	NA	False	NA	NA	NA	41108264	41112928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41108300_41112900
ES.10537.39	chr14	+	3861	1	Intergenic	novelGene_8840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTTTGCAGTTTT	3612	False	NA	NA	False	AATAAA	-22	NA	41141490	41145351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41141500_41145400
ES.10537.4	chr14	+	1770	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14195	-339	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	8.12403840463596	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40986566	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986594_40986925_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.40	chr14	+	6159	2	Intergenic	novelGene_8841	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTTGACAATGGTAA	8682	False	NA	NA	False	NA	NA	NA	41146560	41153318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146812_41147410
ES.10537.41	chr14	+	1105	2	Intergenic	novelGene_8842	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTGCAAGAATGTGT	8691	False	NA	NA	False	AATAAA	-15	NA	41146569	41148273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146812_41147410
ES.10537.42	chr14	+	5225	2	Intergenic	novelGene_8843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	8836	False	NA	NA	False	NA	NA	NA	41146714	41152559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146778_41147397
ES.10537.43	chr14	+	938	2	Intergenic	novelGene_8844	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8838	False	NA	NA	False	AATAAA	-16	NA	41146716	41148274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146778_41147397
ES.10537.44	chr14	+	5240	2	Intergenic	novelGene_8845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	8842	False	NA	NA	False	NA	NA	NA	41146720	41152559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146812_41147410
ES.10537.45	chr14	+	3319	2	Intergenic	novelGene_8846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATAGTACTCCATTGT	8856	False	NA	NA	False	NA	NA	NA	41146734	41150673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146778_41147397
ES.10537.46	chr14	+	740	3	Intergenic	novelGene_8847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	8860	False	NA	NA	False	NA	NA	NA	41146738	41152561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41146812_41147410_41147894_41152377
ES.10537.47	chr14	+	2165	8	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-138740	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.27832182540024	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTTAAAAGCTCTAGAA	4896	False	NA	NA	False	AATAAA	-14	NA	41156427	41303265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41156587_41257540_41257738_41292649_41292723_41295191_41295324_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.48	chr14	+	1529	5	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-37767	-330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.73205080756888	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	41257400	41302932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41257738_41292619_41292723_41296051_41296215_41297159_41297292_41302138
ES.10537.49	chr14	+	1546	1	Intergenic	novelGene_8848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	41257401	41258947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41257400_41258900
ES.10537.5	chr14	+	1521	4	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14098	-330	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.11805216802087	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	40986663	41010442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986778_40986925_40987404_41002809_41002942_41009645
ES.10537.50	chr14	+	2209	6	NNC	ENSMUSG00000090440.3	novel	1757	5	NA	NA	-37754	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.06862723900371	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACAGTGTGTAGTTCAC	NA	False	NA	NA	False	AATACA	-28	NA	41257413	41303473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41257738_41292649_41292723_41296051_41296215_41297159_41297292_41297971_41298154_41302138
ES.10537.6	chr14	+	2187	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14084	5	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	7.7614431647729	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAAGCTGGTAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	40986677	41010777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986778_40986925_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.7	chr14	+	1706	5	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14082	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.87386354243376	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	40986679	41010433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986825_40986925_40987404_41001646_41001810_41002809_41002942_41009645
ES.10537.8	chr14	+	1386	6	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14070	-782	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	7.7614431647729	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAAAGACTTTGAG	NA	False	NA	NA	False	NA	NA	NA	40986691	41009990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986778_40986925_40987404_41001646_41001810_41002809_41002942_41003619_41003802_41009645
ES.10537.9	chr14	+	1360	3	NNC	ENSMUSG00000091110.2	novel	1760	5	NA	NA	-14069	-330	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	4	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	40986692	41010442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_40986778_40986925_40987404_41009645
ES.10538.1	chr14	+	863	5	Antisense	novelGene_ENSMUSG00000091657.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	1.80277563773199	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTGAAGTGAAGGCTC	NA	False	NA	NA	False	ATTAAA	-25	NA	41308687	41342332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41308811_41314264_41314409_41325617_41325689_41328588_41328763_41341981
ES.10538.2	chr14	+	478	3	Antisense	novelGene_ENSMUSG00000091657.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTCTAAATACTTGATA	NA	False	NA	NA	False	AGTAAA	-16	NA	41308694	41342246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41308764_41314264_41314409_41341981
ES.10538.3	chr14	+	1733	7	NNC	ENSMUSG00000091281.2	novel	605	4	NA	NA	-81637	12347	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.52752523165195	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATACAAACAAATAAAAAA	NA	False	NA	NA	False	AATGAA	-12	NA	41314070	41411139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41314284_41328637_41328763_41395718_41395851_41397821_41397954_41398633_41398816_41399638_41399730_41410281
ES.10538.4	chr14	+	1359	9	NNC	ENSMUSG00000091281.2	novel	605	4	NA	NA	-81635	8080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.30182751511212	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTGTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-11	NA	41314072	41406872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41314409_41325617_41325689_41328588_41328763_41395718_41395851_41396702_41396866_41397821_41397954_41398633_41398816_41399638_41399730_41406794
ES.10538.5	chr14	+	3518	12	NNC	ENSMUSG00000091281.2	novel	605	4	NA	NA	-81547	43119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.88038746598893	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAACTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	41314160	41441911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41314409_41325617_41325689_41328588_41328763_41395718_41395851_41396702_41396866_41397821_41397954_41398633_41398816_41399638_41399730_41410312_41410457_41436787_41436903_41437001_41437244_41440087
ES.10538.6	chr14	+	4234	1	Intergenic	novelGene_8849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCCAGTAGCTGCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	41405212	41409446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41405200_41409400
ES.10538.7	chr14	+	3793	3	Antisense	novelGene_ENSMUSG00000095518.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	41410139	41441913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41410457_41436787_41438438_41440087
ES.10538.8	chr14	+	5508	1	Intergenic	novelGene_8850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGCTTCATTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	41437243	41442751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41437200_41442800
ES.10539.1	chr14	+	1683	9	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-41148	4	multi-exon	TRUE	non_canonical	0	0	junction_1	7.2876179235742	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCTTAAGAAACTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	41705757	41825782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41705846_41709243_41709388_41744387_41744461_41746951_41747062_41747789_41747953_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.10	chr14	+	1338	3	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4506	353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.5	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAGACATGTATGCT	NA	False	NA	NA	False	AATAAA	-32	NA	41761445	41826131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41825013
ES.10539.11	chr14	+	5050	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4500	-45709	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	93.667259784599	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAGTTTCCAAGACG	NA	False	NA	NA	False	NA	NA	NA	41761451	41780067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41775406
ES.10539.12	chr14	+	914	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-40076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.924999662645	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTGTGTATCAGT	NA	False	NA	NA	False	AGTAAA	-39	NA	41761472	41785700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765844_41766287_41785421
ES.10539.13	chr14	+	1615	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	6	intron_retention	TRUE	canonical	3	21	junction_4	63.2262252198845	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	41761472	41825784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ES.10539.14	chr14	+	1356	3	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-58772	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	76	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGTTTGTATAAAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	41761472	41767004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841
ES.10539.15	chr14	+	1564	5	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4479	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	79.3772637472469	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41761472	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41825013
ES.10539.16	chr14	+	1912	7	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4479	0	intron_retention	FALSE	canonical	2	3	junction_4	66.6893711338038	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41761472	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819210_41819378_41820058_41820240_41825013
ES.10539.17	chr14	+	1885	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	6	intron_retention	FALSE	canonical	3	21	junction_4	63.0672040146241	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	41761472	41825784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ES.10539.18	chr14	+	2860	5	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-4445	intron_retention	FALSE	canonical	3	16	junction_2	77.2346263019379	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAGTTTTAGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	41761472	41821331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41818127_41819378_41820058
ES.10539.19	chr14	+	1326	3	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-58501	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	104.5	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AAAAAG	-10	NA	41761472	41767275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766142
ES.10539.2	chr14	+	1626	8	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-41123	0	multi-exon	FALSE	non_canonical	0	0	junction_1	7.86363368258451	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41705782	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41705869_41709212_41709388_41744357_41744461_41747789_41747953_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.20	chr14	+	2530	6	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-1	intron_retention	FALSE	canonical	3	16	junction_2	69.5775825966956	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	41761472	41825775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41818127_41819378_41820058_41820240_41825013
ES.10539.21	chr14	+	995	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	-40007	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	91.9710099252295	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGAAGGCTCTTATTA	NA	False	NA	NA	False	ATTAAA	-31	NA	41761472	41785769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41785412
ES.10539.22	chr14	+	3193	6	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4479	359	intron_retention	FALSE	canonical	3	69	junction_4	59.7394342122521	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACATGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-38	NA	41761472	41826137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41819378_41820058_41820240_41825013
ES.10539.23	chr14	+	542	3	Antisense	novelGene_ENSMUSG00000095044.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	112.5	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTCTTATTATT	NA	False	NA	NA	False	ATTAAA	-33	NA	41761473	41785771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41761595_41761988_41762060_41785421
ES.10539.24	chr14	+	2147	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	-1	intron_retention	FALSE	canonical	0	0	junction_1	31.956567747839	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	41761473	41825775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761867_41761988_41762060_41765841_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ES.10539.25	chr14	+	1099	4	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4478	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.503116483787	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41761473	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41825013
ES.10539.26	chr14	+	3512	2	Antisense	novelGene_ENSMUSG00000095044.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTCTTATTATTTC	NA	False	NA	NA	False	ATTAAA	-35	NA	41761473	41785773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41761505_41782292
ES.10539.27	chr14	+	1977	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4478	353	intron_retention	FALSE	canonical	1	1	junction_4	67.2458177138177	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAGACATGTATGCT	NA	False	NA	NA	False	AATAAA	-32	NA	41761473	41826131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766111_41766287_41818127_41818291_41819229_41819378_41820058_41820240_41825013
ES.10539.28	chr14	+	3511	5	NNC	ENSMUSG00000052334.12	novel	1573	6	NA	NA	-4477	0	intron_retention	FALSE	canonical	3	73	junction_2	63.5073814607405	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41761474	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41820240_41825013
ES.10539.29	chr14	+	5296	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4477	-45710	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	93.3714208000618	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACAGTTTCCAAGAC	NA	False	NA	NA	False	NA	NA	NA	41761474	41780066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41775406
ES.10539.3	chr14	+	2171	10	Fusion	ENSMUSG00000052334.12_ENSMUSG00000094157.8	novel	1239	4	NA	NA	-60166	0	multi-exon	TRUE	non_canonical	0	0	junction_1	19.2013374019804	134	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41705785	42147351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41705869_41765841_41766176_41965689_41965801_42041268_42041401_42042082_42042264_42043087_42043179_42132167_42132331_42133285_42133418_42134097_42134279_42146588
ES.10539.31	chr14	+	692	4	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4474	-40004	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	101.21594077351	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGCTCTTATTATTT	NA	False	NA	NA	False	ATTAAA	-34	NA	41761477	41785772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41766142_41766287_41785412
ES.10539.32	chr14	+	2256	7	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4468	353	intron_retention	FALSE	canonical	2	3	junction_4	66.6893711338038	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAGACATGTATGCT	NA	False	NA	NA	False	AATAAA	-32	NA	41761483	41826131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841_41766287_41818127_41818291_41819210_41819378_41820058_41820240_41825013
ES.10539.33	chr14	+	1625	3	NNC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	-4446	-58470	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_2	76	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	41761505	41767306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41761595_41761988_41762060_41765841
ES.10539.34	chr14	+	3332	1	NIC	ENSMUSG00000052334.12	novel	1576	5	NA	NA	56495	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41822446	41825778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_41822400_41825800
ES.10539.35	chr14	+	903	2	Antisense	novelGene_ENSMUSG00000091031.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	41845084	41858754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_41845338_41858104
ES.10539.36	chr14	+	744	3	Intergenic	novelGene_8851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	41955822	41961649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41955869_41956485_41956982_41961447
ES.10539.37	chr14	+	1880	2	Intergenic	novelGene_8853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	41955851	41961649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41955902_41959819
ES.10539.38	chr14	+	2531	4	Intergenic	novelGene_8852	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	12.7279220613579	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	41955851	41961647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41955902_41956497_41956982_41958007_41958177_41959819
ES.10539.39	chr14	+	5770	1	Intergenic	novelGene_8854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	41955880	41961650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41955900_41961600
ES.10539.4	chr14	+	1448	5	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-37867	0	multi-exon	FALSE	non_canonical	0	0	junction_1	8.8140512819021	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41709038	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41709388_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.40	chr14	+	3343	1	Intergenic	novelGene_8855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTTTGACAATGGTA	NA	False	NA	NA	False	NA	NA	NA	41959062	41962405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_41959100_41962400
ES.10539.41	chr14	+	3399	9	Fusion	ENSMUSG00000079273.3_ENSMUSG00000094157.8	novel	1239	4	NA	NA	-74667	0	intron_retention	FALSE	canonical	0	0	junction_1	20.1788874817221	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41965574	42147351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41965801_42040240_42040373_42041268_42041401_42042082_42042264_42043087_42043179_42062684_42063128_42132167_42133418_42134097_42134279_42146588
ES.10539.42	chr14	+	2296	7	NNC	ENSMUSG00000094157.8	novel	1239	4	NA	NA	-25212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.6568606239552	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42106954	42147351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42107078_42114313_42115142_42117804_42117911_42132167_42132331_42133285_42133418_42134097_42134279_42146588
ES.10539.43	chr14	+	1361	5	NNC	ENSMUSG00000094157.8	novel	1239	4	NA	NA	-25212	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.0798724079689	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42106954	42147350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42107078_42132167_42132331_42133285_42133418_42134097_42134279_42146588
ES.10539.44	chr14	+	2992	2	Antisense	novelGene_ENSMUSG00000095371.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTCTTATTATT	NA	False	NA	NA	False	ATTAAA	-33	NA	42106954	42114977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_42107078_42112108
ES.10539.5	chr14	+	1683	7	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-37866	0	multi-exon	FALSE	non_canonical	0	0	junction_1	8.18535277187245	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41709039	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41709388_41744387_41744461_41747789_41747953_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.6	chr14	+	1804	8	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-37847	0	multi-exon	FALSE	non_canonical	0	0	junction_1	7.51053681605424	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41709058	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41709388_41744357_41744461_41746951_41747062_41747789_41747953_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.7	chr14	+	1694	6	NNC	ENSMUSG00000079271.5	novel	1761	5	NA	NA	-37833	-342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.47112743381895	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41709072	41754656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_41709388_41744344_41744461_41747789_41747953_41748897_41749030_41749709_41749892_41753870
ES.10539.8	chr14	+	1863	8	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	-37751	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	8.0862695417628	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	41709154	41825775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41709388_41745486_41745746_41746951_41747062_41747789_41747953_41748897_41749030_41749709_41749892_41753870_41754607_41825727
ES.10539.9	chr14	+	1552	4	Fusion	ENSMUSG00000079271.5_ENSMUSG00000052334.12	novel	1761	5	NA	NA	412	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1.69967317119759	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41747317	41825776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_41747953_41748897_41749030_41753870_41754607_41825727
ES.1054.1	chr1	+	1757	4	Antisense	novelGene_ENSMUSG00000034088.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93364421	93369582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_93364636_93364827_93365034_93365949_93366106_93368401
ES.1054.2	chr1	+	5193	1	Antisense	novelGene_ENSMUSG00000034088.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCATTACAATAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	93364421	93369614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_93364400_93369600
ES.10540.1	chr14	+	1422	4	NNC	ENSMUSG00000094954.2	novel	1751	5	NA	NA	-37955	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.78423336480244	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42247882	42293740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42248212_42287840_42287973_42288667_42288850_42292961
ES.10540.2	chr14	+	4575	8	Fusion	ENSMUSG00000114402.2_ENSMUSG00000094954.2	novel	1751	5	NA	NA	-357	-339	multi-exon	TRUE	canonical	0	0	junction_1	3.68117106477861	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42274504	42293740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42275065_42280769_42283403_42284419_42284448_42285895_42285994_42286712_42286876_42287840_42287973_42288667_42288850_42292961
ES.10541.1	chr14	+	1028	3	Antisense	novelGene_ENSMUSG00000090481.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	11.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATATCTATGATCCA	NA	False	NA	NA	False	NA	NA	NA	42300581	42317522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_42300714_42304885_42305330_42317070
ES.10541.2	chr14	+	3426	13	Fusion	ENSMUSG00000091788.4_ENSMUSG00000114938.2	novel	574	4	NA	NA	-64829	35558	multi-exon	TRUE	canonical	0	0	junction_2	9.21464715668605	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	42300599	42417530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42300714_42304885_42305330_42365191_42365661_42376460_42376534_42379029_42379140_42379867_42380031_42381000_42381133_42381814_42381996_42382819_42382911_42388950_42389194_42390385_42390721_42402434_42402879_42416903
ES.10541.3	chr14	+	2854	13	Fusion	ENSMUSG00000091788.4_ENSMUSG00000093948.8_ENSMUSG00000114938.2	novel	1239	4	NA	NA	-64804	0	multi-exon	TRUE	canonical	0	0	junction_2	23.6584492776307	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42300624	42485562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42300714_42304885_42305330_42365328_42365661_42376460_42376534_42379029_42379140_42379867_42380031_42381000_42381133_42381814_42381996_42382819_42382911_42477895_42478059_42479014_42479147_42479826_42480008_42484799
ES.10541.4	chr14	+	2097	10	NNC	ENSMUSG00000091788.4	novel	574	4	NA	NA	-78342	35568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.381607668265	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTCTTATTATT	NA	False	NA	NA	False	ATTAAA	-33	NA	42300665	42417540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42300714_42304885_42305330_42376430_42376534_42379007_42379140_42379867_42380031_42381000_42381133_42381814_42381996_42382819_42382911_42402434_42402879_42417181
ES.10541.5	chr14	+	4874	1	Antisense	novelGene_ENSMUSG00000095318.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	42337061	42341935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_42337100_42341900
ES.10541.6	chr14	+	4630	1	Intergenic	novelGene_8856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGTGTAGTCACACTA	NA	False	NA	NA	False	AAAAAG	-4	NA	42359315	42363945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_42359300_42363900
ES.10541.7	chr14	+	3477	8	Fusion	ENSMUSG00000091788.4_ENSMUSG00000093948.8_ENSMUSG00000114938.2	novel	1239	4	NA	NA	-203	-1	intron_retention	FALSE	canonical	1	1	junction_1	29.4756904334845	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42365225	42485561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42365661_42381000_42381133_42381814_42381996_42382819_42382911_42402434_42402879_42477895_42479147_42479826_42480008_42484799
ES.10541.8	chr14	+	2282	9	Fusion	ENSMUSG00000091788.4_ENSMUSG00000114938.2	novel	574	4	NA	NA	-197	35560	multi-exon	FALSE	canonical	1	1	junction_8	3.9350190596743	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTGAAGTGAAGGCTC	NA	False	NA	NA	False	ATTAAA	-25	NA	42365231	42417532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42365661_42376430_42376534_42379029_42379140_42379867_42380031_42381000_42381133_42381814_42381996_42382819_42382911_42402434_42402879_42416903
ES.10541.9	chr14	+	3603	9	Fusion	ENSMUSG00000091788.4_ENSMUSG00000093948.8_ENSMUSG00000114938.2	novel	1239	4	NA	NA	197	362	intron_retention	FALSE	canonical	1	2	junction_5	27.8228211186429	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGTATGCTTCTGCTT	NA	False	NA	NA	False	AATAAA	-39	NA	42365625	42485924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42365661_42379867_42380031_42381000_42381133_42381814_42381996_42382819_42382911_42402434_42402879_42477895_42479147_42479826_42480008_42484799
ES.10542.1	chr14	-	4993	5	NNC	ENSMUSG00000095318.2	novel	1408	5	NA	NA	-10512	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACATCATCTCTAATT	NA	False	NA	NA	False	AATAAA	-19	NA	42356751	42340834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_42341608_42342740_42342925_42343577_42343710_42344962_42345126_42353010
ES.10543.1	chr14	-	3939	1	Intergenic	novelGene_8857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCGGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	42390624	42386685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_42386700_42390600
ES.10544.1	chr14	-	7609	1	Genic_Genomic	ENSMUSG00000090351.2	novel	NA	NA	NA	NA	-2389	3005	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCCAATTCCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	42409548	42401939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42401900_42409500
ES.10544.2	chr14	-	3547	1	Genic_Genomic	ENSMUSG00000090351.2	novel	NA	NA	NA	NA	-541	791	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAACTGTTTTTCTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	42407700	42404153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42404200_42407700
ES.10544.3	chr14	-	3331	1	Genic_Genomic	ENSMUSG00000090351.2	novel	NA	NA	NA	NA	-1912	-796	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTGAGTGACTAACAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	42409071	42405740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42405700_42409100
ES.10544.4	chr14	-	3289	1	Genic_Genomic	ENSMUSG00000090351.2	novel	NA	NA	NA	NA	-2615	-1541	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCATTCTGATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	42409774	42406485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42406500_42409800
ES.10545.1	chr14	+	3814	5	NNC	ENSMUSG00000096446.2	novel	1761	5	NA	NA	-59327	-330	intron_retention	TRUE	non_canonical	0	0	junction_1	7.26291952316697	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	42898730	42972317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42898741_42956412_42959105_42966542_42966675_42967358_42967541_42971519
ES.10545.10	chr14	+	1433	4	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-292	-338	multi-exon	FALSE	canonical	0	0	junction_1	11.6714276000077	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42988568	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43039360_43039493_43040175_43040358_43044317
ES.10545.11	chr14	+	1255	3	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-291	-333	multi-exon	FALSE	canonical	0	0	junction_1	8.5	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTCTTAAGAAACTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	42988569	43045112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43039360_43039493_43044317
ES.10545.12	chr14	+	2727	10	Fusion	ENSMUSG00000115262.2_ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-290	-324	multi-exon	FALSE	canonical	0	0	junction_1	11.1432867461164	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTCTTTATTCAGC	NA	False	NA	NA	False	AATAAA	-27	NA	42988570	43045121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43026084_43026491_43027534_43027704_43034755_43034871_43035898_43036158_43037347_43037518_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.13	chr14	+	2517	9	Fusion	ENSMUSG00000115262.2_ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-288	-341	multi-exon	FALSE	canonical	0	0	junction_1	11.0905365064094	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTCTTCACTCTTAAG	NA	False	NA	NA	False	AATAAA	-10	NA	42988572	43045104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43026084_43026491_43034755_43034871_43035898_43036158_43037369_43037518_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.14	chr14	+	2495	9	Fusion	ENSMUSG00000115262.2_ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-276	-338	multi-exon	FALSE	canonical	0	0	junction_1	10.9765374777295	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42988584	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43026084_43026491_43034768_43034871_43035898_43036158_43037369_43037518_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.15	chr14	+	1841	9	Fusion	ENSMUSG00000114544.2_ENSMUSG00000090634.2	novel	1764	5	NA	NA	-119419	-338	multi-exon	TRUE	canonical	0	0	junction_1	20.7409618870485	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42988627	43123918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988820_43066926_43067007_43113556_43113660_43114627_43114714_43116151_43116262_43116990_43117154_43118142_43118275_43118957_43119140_43123125
ES.10545.16	chr14	+	3258	7	Fusion	ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1241	3	NA	NA	-635	-339	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43025449	43045106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_43025647_43026084_43026491_43034768_43036158_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.17	chr14	+	4134	4	Fusion	ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-1983	-338	intron_retention	FALSE	canonical	3	19	junction_2	3.68178700572909	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43035340	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.18	chr14	+	1267	3	NNC	ENSMUSG00000090634.2	novel	1764	5	NA	NA	-49443	-340	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	2	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTCTTCACTCTTAAGA	NA	False	NA	NA	False	AATAAA	-11	NA	43066662	43123916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43067007_43118142_43118275_43123125
ES.10545.19	chr14	+	1331	3	NNC	ENSMUSG00000114544.2	novel	674	3	NA	NA	-624	7657	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43107422	43123918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43107473_43108019_43108508_43123125
ES.10545.2	chr14	+	3776	5	NNC	ENSMUSG00000096446.2	novel	1761	5	NA	NA	-59297	-338	intron_retention	TRUE	non_canonical	0	0	junction_1	7.26291952316697	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42898760	42972309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42898770_42956441_42959105_42966542_42966675_42967358_42967541_42971519
ES.10545.20	chr14	+	2860	6	NNC	ENSMUSG00000090634.2	novel	1764	5	NA	NA	-2873	-339	intron_retention	FALSE	canonical	0	0	junction_1	22.4107117245303	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43113232	43123917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43114714_43116151_43116262_43116990_43117154_43118142_43118275_43118957_43119140_43123125
ES.10545.21	chr14	+	4219	2	NIC	ENSMUSG00000090634.2	novel	1764	5	NA	NA	-390	529	intron_retention	FALSE	canonical	3	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGGACTTTTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	43115715	43124785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_43118275_43123125
ES.10545.3	chr14	+	1381	5	NNC	ENSMUSG00000094151.2	novel	1761	5	NA	NA	-126514	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.1732288239399	67	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42910809	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42910941_42915451_42915598_43039360_43039493_43040175_43040358_43044317
ES.10545.4	chr14	+	3138	6	Fusion	ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-115247	-339	intron_retention	FALSE	non_canonical	0	0	junction_1	6.58483105326173	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	42910837	43045106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42910965_42915422_42915598_43034768_43034871_43037369_43038813_43038990_43039493_43044317
ES.10545.5	chr14	+	1717	7	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-73611	-338	multi-exon	TRUE	non_canonical	0	0	junction_1	11.5433963806152	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42915249	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42915440_42988739_42988898_43034768_43034871_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.6	chr14	+	3545	2	NNC	ENSMUSG00000114317.2	novel	594	2	NA	NA	-31650	2792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGAATAGTACTCCA	NA	False	NA	NA	False	NA	NA	NA	42915251	42950034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42915598_42946835
ES.10545.7	chr14	+	1660	7	Fusion	ENSMUSG00000114619.2_ENSMUSG00000094151.2	novel	1761	5	NA	NA	-110668	-338	multi-exon	FALSE	canonical	0	0	junction_1	10.3440804327886	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42915416	43045107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42915598_43034768_43034871_43037369_43037480_43038207_43038371_43039360_43039493_43040175_43040358_43044317
ES.10545.8	chr14	+	1502	5	Fusion	ENSMUSG00000115262.2_ENSMUSG00000094151.2	novel	690	2	NA	NA	-300	-360	multi-exon	FALSE	canonical	0	0	junction_1	9.67923034130297	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAATAAAACAGTGATCT	NA	False	NA	NA	False	AGTAAA	-14	NA	42988560	43045085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_42988898_43034768_43034871_43038207_43038371_43039360_43039493_43044317
ES.10545.9	chr14	+	1125	3	NNC	ENSMUSG00000090634.2	novel	1764	5	NA	NA	-127538	-338	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42988567	43123918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_42988820_43066926_43067007_43123125
ES.10546.1	chr14	-	6360	1	Genic_Genomic	ENSMUSG00000090389.3	novel	NA	NA	NA	NA	-1257	3568	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATAGTCGTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	42981185	42974825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42974800_42981200
ES.10546.2	chr14	-	3357	1	Genic_Genomic	ENSMUSG00000090389.3	novel	NA	NA	NA	NA	329	2151	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATCAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	42979599	42976242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_42976200_42979600
ES.10547.1	chr14	-	175	1	Intergenic	novelGene_8858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43067765	43067590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_43067600_43067800
ES.10548.1	chr14	+	900	3	NNC	ENSMUSG00000115483.2	novel	1188	2	NA	NA	-3317	-211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	43129175	43146864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129282_43132375_43132821_43146515
ES.10548.10	chr14	+	1640	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3284	-338	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	21.2779228309532	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43129208	43163123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129304_43132375_43132821_43157302_43157435_43158114_43158297_43162337
ES.10548.11	chr14	+	4261	2	FSM	ENSMUSG00000115483.2	ENSMUST00000228840.2	1188	2	-3273	200	-3273	-200	multi-exon	FALSE	canonical	2	4	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGCTCTTATTATTT	NA	False	NA	NA	False	ATTAAA	-34	NA	43129219	43146875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_43132821_43146215
ES.10548.12	chr14	+	2826	6	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-10	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.4620482956252	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACATGTATGTTTCTG	NA	False	NA	NA	False	AATAAA	-36	NA	43132482	43163486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43132821_43146215_43147039_43147845_43148048_43157302_43157435_43158114_43158297_43162337
ES.10548.13	chr14	+	5477	3	ISM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	-190	345	-8	-338	intron_retention	FALSE	canonical	3	45	junction_2	14	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43132484	43163123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_43132821_43157302_43157435_43158114
ES.10548.14	chr14	+	4756	1	Genic_Genomic	ENSMUSG00000115483.2	novel	NA	NA	NA	NA	-9269	4740	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGATTTACAACCCCAT	NA	False	NA	NA	False	NA	NA	NA	43147059	43151815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_43147100_43151800
ES.10548.15	chr14	+	178	1	Intergenic	novelGene_8859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGATGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	43150635	43150813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43150600_43150800
ES.10548.16	chr14	+	882	3	Intergenic	novelGene_8860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	72	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGTTTTGTCTCATAT	NA	False	NA	NA	False	NA	NA	NA	43169925	43173760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43170061_43170454_43170526_43173084
ES.10548.17	chr14	+	2945	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73732	858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.2261890928809	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGGACTTTTGTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	43169938	43252339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43170061_43170454_43170526_43173084_43173568_43243646_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
ES.10548.18	chr14	+	1723	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73732	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	49.2250143810678	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTAAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	43169938	43251479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43170061_43170454_43170526_43173424_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
ES.10548.19	chr14	+	1752	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73732	-4	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_5	47.8321896566208	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTCTTCACTCTAAGAA	NA	False	NA	NA	False	AATAAA	-11	NA	43169938	43251477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43170061_43170454_43170526_43173393_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
ES.10548.2	chr14	+	643	3	NNC	ENSMUSG00000115483.2	novel	1188	2	NA	NA	-3317	-211	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	7.5	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	43129175	43146864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129304_43132645_43132821_43146524
ES.10548.20	chr14	+	2923	8	NNC	ENSMUSG00000090788.3	novel	1387	5	NA	NA	-73731	859	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	48.8128454154336	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGACTTTTGTCCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	43169939	43252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43170061_43170454_43170526_43173084_43173568_43243668_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
ES.10548.21	chr14	+	1355	3	Intergenic	novelGene_8861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	72	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAATAAATAAA	NA	False	NA	NA	False	AATGAA	-9	NA	43169939	43174247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43170061_43170454_43170526_43173084
ES.10548.22	chr14	+	4307	1	Intergenic	novelGene_8862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAATAAATAAA	NA	False	NA	NA	False	AATGAA	-9	NA	43169940	43174247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43169900_43174200
ES.10548.23	chr14	+	3953	2	Intergenic	novelGene_8863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	162	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTGTATAAAATTATAGA	NA	False	NA	NA	False	AATAAA	-25	NA	43169940	43174287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43170061_43170454
ES.10548.24	chr14	+	1731	4	Antisense	novelGene_ENSMUSG00000095384.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	72.4982758415674	52	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTCCAAAATGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	43169942	43212200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_43170061_43170454_43170526_43173084_43173568_43211141
ES.10548.25	chr14	+	3488	2	Intergenic	novelGene_8864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	162	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGCCTGCTTTGCGAT	NA	False	NA	NA	False	NA	NA	NA	43169959	43173841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_43170061_43170454
ES.10548.3	chr14	+	1195	3	NNC	ENSMUSG00000115483.2	novel	1188	2	NA	NA	-3312	-211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTTTGAAGTGAAGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	43129180	43146864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129282_43132375_43132821_43146215
ES.10548.4	chr14	+	1346	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3309	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.98548731039	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43129183	43163123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129255_43132645_43132821_43157302_43157435_43158114_43158297_43162337
ES.10548.5	chr14	+	1680	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3309	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.3874967965144	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATTTAAAAGCTCTA	NA	False	NA	NA	False	AATAAA	-11	NA	43129183	43163461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129282_43132676_43132821_43157302_43157435_43158114_43158297_43162337
ES.10548.6	chr14	+	1513	4	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3309	8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	29.0631496343164	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAGAAAACACAGACATG	NA	False	NA	NA	False	AATAAA	-26	NA	43129183	43163476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129282_43132676_43132821_43157302_43157435_43162337
ES.10548.7	chr14	+	1023	4	Fusion	ENSMUSG00000090788.3_ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3306	-3	multi-exon	TRUE	non_canonical	0	0	junction_3	3.68178700572909	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTTCACTCTAAGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	43129186	43251478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_43129282_43132676_43132821_43162337_43163074_43251430
ES.10548.8	chr14	+	1370	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3285	-339	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	20.897069172494	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43129207	43163122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129304_43132645_43132821_43157302_43157435_43158114_43158297_43162337
ES.10548.9	chr14	+	1983	5	NNC	ENSMUSG00000115483.2	novel	1591	4	NA	NA	-3284	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	21.2779228309532	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGCTCTAGAAAACACA	NA	False	NA	NA	False	AATAAA	-20	NA	43129208	43163470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43129300_43132375_43132821_43157302_43157435_43158114_43158297_43162337
ES.10549.1	chr14	-	5237	7	NNC	ENSMUSG00000095384.2	novel	884	5	NA	NA	-14700	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.11803398874989	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTATTATCAATGTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	43219968	43199846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_43200189_43201960_43202146_43202805_43202938_43204090_43204248_43206286_43206466_43214652_43218863_43219936
ES.1055.1	chr1	+	3453	13	NNC	ENSMUSG00000026276.21	novel	418	2	NA	NA	-516	-527	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	276.37831358886	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406169	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406476_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.11	chr1	+	4442	13	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	9	-982	intron_retention	FALSE	canonical	3	36	junction_1	350.984834667634	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACATTTGCTCGCTT	NA	False	NA	NA	False	TATAAA	-11	NA	93406723	93437000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.12	chr1	+	3281	14	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	12	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	407.636498357175	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406726	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423363_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.13	chr1	+	5415	11	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	13	5	intron_retention	FALSE	canonical	3	766	junction_1	73.6967434830061	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACGTTTTTCTACCT	NA	False	NA	NA	False	NA	NA	NA	93406727	93437987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.17	chr1	+	3307	14	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	352.83928654584	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406733	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93407185_93407289_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.18	chr1	+	1554	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	51	2174	-6	740	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTAATAGTGAATTT	NA	False	NA	NA	False	NA	NA	NA	93406736	93435808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.19	chr1	+	3194	13	NNC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	373.422785042489	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406736	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416853_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431242_93433265_93433324_93434684_93434805_93435434
ES.1055.2	chr1	+	3744	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	-492	527	-492	-527	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406193	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.20	chr1	+	2939	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	52	788	-5	-788	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGTGAGTCCCATGT	NA	False	NA	NA	False	AATGAA	-14	NA	93406737	93437194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.21	chr1	+	3726	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	52	1	-5	-1	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGATTTTTACGTTTTT	NA	False	NA	NA	False	NA	NA	NA	93406737	93437981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.23	chr1	+	3795	14	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.026131797686	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACGTTTTTCTACCTT	NA	False	NA	NA	False	NA	NA	NA	93406737	93437988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416693_93416756_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.24	chr1	+	3108	14	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-2	-535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	268.867557197981	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAATGAGTAGTCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	93406740	93437447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434_93436314_93436394
ES.1055.25	chr1	+	3122	12	NNC	ENSMUSG00000116048.2	novel	3192	12	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	366.282079801171	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406740	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426828_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.26	chr1	+	8127	10	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-2	-530	intron_retention	FALSE	canonical	3	766	junction_1	81.1433725795289	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406740	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93434805_93435434
ES.1055.27	chr1	+	4744	12	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	26	0	intron_retention	FALSE	canonical	3	766	junction_1	76.2177177293296	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406740	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.31	chr1	+	4866	11	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-1	-530	intron_retention	FALSE	canonical	3	766	junction_1	73.6967434830061	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406741	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.33	chr1	+	3004	12	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	0	-531	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	367.429467004404	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406742	93437451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426828_93426994_93427113_93428179_93428282_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.34	chr1	+	3189	13	NNC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	279.767599486113	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427107_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.35	chr1	+	3184	13	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	1	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	279.282712199186	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406743	93437451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433318_93434684_93434805_93435434
ES.1055.36	chr1	+	1762	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	59	1958	2	956	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAATTTTGCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	93406744	93436024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.37	chr1	+	5214	12	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	2	-531	intron_retention	FALSE	canonical	3	766	junction_1	78.8300819369219	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406744	93437451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93433324_93434684_93434805_93435434
ES.1055.38	chr1	+	3289	14	NNC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	5	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	359.177050834479	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406747	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93431647_93431750_93433265_93433324_93434684_93434805_93435434
ES.1055.4	chr1	+	1177	9	ISM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	0	8400	0	1332	5prime_fragment	FALSE	canonical	3	766	junction_1	91.141030825858	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTCCCCTCTTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	93406685	93429582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228
ES.1055.41	chr1	+	3082	13	NNC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	278.173344737094	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406769	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429289_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.42	chr1	+	3079	12	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	288.167909042025	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406771	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.43	chr1	+	3152	13	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	-8	-530	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	416.819705228372	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406772	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.45	chr1	+	3268	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	-1	0	-1	0	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406781	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.47	chr1	+	3328	14	NNC	ENSMUSG00000116048.2	novel	3267	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.026131797686	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406783	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93406903_93416693_93416756_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.48	chr1	+	1573	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	2	1692	2	-1692	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCACTAATGTTAGAATT	NA	False	NA	NA	False	TTTAAA	-36	NA	93406784	93435763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.49	chr1	+	2982	13	NIC	ENSMUSG00000026276.21	novel	552	6	NA	NA	-5	-788	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	275.834491437649	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGTGAGTCCCATGT	NA	False	NA	NA	False	AATGAA	-14	NA	93406936	93437194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93407037_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.5	chr1	+	3093	12	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	9	-531	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	287.720939180615	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAGTAGTCCTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93406694	93437451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.50	chr1	+	3532	13	NIC	ENSMUSG00000026276.21	novel	779	8	NA	NA	-5	-527	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	262.793962386252	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406936	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.51	chr1	+	3590	14	NNC	ENSMUSG00000026276.21	novel	779	8	NA	NA	-4	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.026131797686	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406937	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93407322_93416693_93416756_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.52	chr1	+	3246	13	NIC	ENSMUSG00000026276.21	novel	477	6	NA	NA	-4	-527	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	275.56259371612	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406937	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93407037_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.54	chr1	+	3207	13	NNC	ENSMUSG00000026276.21	novel	552	6	NA	NA	8	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.194113193063	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406952	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93407020_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.55	chr1	+	221	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	665	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATATCACTTTCTATAG	NA	False	NA	NA	False	NA	NA	NA	93414271	93414492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93414300_93414500
ES.1055.56	chr1	+	3145	12	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	10062	3	10062	-3	3prime_fragment	FALSE	canonical	3	896	junction_9	51.6805188930786	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93416844	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.57	chr1	+	2529	6	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	21396	3	21396	-3	3prime_fragment	FALSE	canonical	3	896	junction_3	40.4148487563668	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	6506	False	NA	NA	False	AATAAA	-20	NA	93428178	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.58	chr1	+	3145	2	FSM	ENSMUSG00000026276.21	ENSMUST00000157021.2	418	2	-343	-2384	32	-530	multi-exon	FALSE	canonical	3	953	junction_1	0	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTAGTCCTCTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	93432946	93437452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93433324_93434684
ES.1055.6	chr1	+	3208	12	FSM	ENSMUSG00000116048.2	ENSMUST00000172165.8	3192	12	-16	0	-16	0	multi-exon	FALSE	canonical	2	28	junction_1	279.729178354959	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406698	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.7	chr1	+	3359	14	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	343.313233551171	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.1055.8	chr1	+	1310	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	29	2440	0	474	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTGGTTGTTTTTTG	NA	False	NA	NA	False	AATGAA	-18	NA	93406714	93435542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ES.10550.1	chr14	-	167	1	Intergenic	novelGene_8865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTCTGG	NA	False	NA	NA	False	NA	NA	NA	43242020	43241853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_43241900_43242000
ES.10551.1	chr14	+	1903	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45976	-51	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	6.78232998312527	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAATAAAACAGTGATCT	NA	False	NA	NA	False	AGTAAA	-14	NA	43735056	43788619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43769911_43770400_43781959_43782123_43783111_43783244_43787849
ES.10551.10	chr14	+	2128	9	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11757	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5881714663109	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43769275	43788641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43769365_43769911_43770400_43778540_43778627_43779598_43779685_43781120_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.11	chr14	+	2026	8	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11729	-30	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.183077594732	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43769303	43788640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43769402_43769911_43770400_43778540_43778627_43779598_43779685_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.12	chr14	+	2030	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11729	309	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	11.056672193748	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAATATAAAAGCTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	43769303	43788979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43769402_43769911_43770400_43783111_43783244_43783926_43784109_43787849
ES.10551.13	chr14	+	2179	7	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11326	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.4309521329882	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	43769706	43788640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43770400_43778540_43778627_43781098_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.14	chr14	+	1638	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11020	-47	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.8714074525794	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACAGTGATCTCTAA	NA	False	NA	NA	False	AGTAAA	-18	NA	43770012	43788623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43770400_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.15	chr14	+	1504	6	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-10782	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.280065146407	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43770250	43788641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43770400_43778540_43778627_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.2	chr14	+	2053	6	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45972	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5123938556936	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGTAGAAAACACAGACA	NA	False	NA	NA	False	AATAAA	-25	NA	43735060	43788993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43778540_43778627_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.3	chr14	+	2297	8	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45964	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.287698221365	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCTTAAGAAACTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	43735068	43788647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43769911_43770400_43778540_43778627_43781120_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.4	chr14	+	1607	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45964	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.8714074525794	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43735068	43788641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.5	chr14	+	1774	6	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45955	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5123938556936	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTCTTTATTCAGG	NA	False	NA	NA	False	AATAAA	-27	NA	43735077	43788655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43749900_43750063_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.6	chr14	+	3832	8	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45940	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.9727581941468	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43735092	43788641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43776009_43778087_43778540_43778627_43779598_43779685_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.7	chr14	+	1581	3	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45940	314	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAAGCTGGTAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	43735092	43788984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43783111_43783244_43787849
ES.10551.8	chr14	+	1846	7	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-45914	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6249253283145	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTAAGAAACTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	43735118	43788649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43735407_43749891_43750063_43781120_43781231_43781959_43782123_43783111_43783244_43783926_43784109_43787849
ES.10551.9	chr14	+	1738	5	NNC	ENSMUSG00000091477.2	novel	1314	4	NA	NA	-11775	-29	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	11.056672193748	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	43769257	43788641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43769402_43769911_43770400_43783111_43783244_43783926_43784109_43787849
ES.10552.1	chr14	+	832	3	NNC	ENSMUSG00000115050.2	novel	1232	3	NA	NA	-89801	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTCTAATTACTTGATA	NA	False	NA	NA	False	AGTAAA	-16	NA	43793906	43910431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43794029_43888316_43888461_43909865
ES.10552.2	chr14	+	4025	1	Antisense	novelGene_ENSMUSG00000095743.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAGGCTATTATTATT	NA	False	NA	NA	False	ATTAAA	-33	NA	43808380	43812405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_43808400_43812400
ES.10553.1	chr14	+	1963	3	NNC	ENSMUSG00000049235.9	novel	660	2	NA	NA	-3247	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGGAAGAGAAAG	6696	False	NA	NA	False	NA	NA	NA	43932037	43952830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_43932162_43935486_43935631_43951135
ES.10554.1	chr14	+	169	1	Intergenic	novelGene_8866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACAGGATAGAACA	NA	False	NA	NA	False	NA	NA	NA	44358306	44358475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_44358300_44358500
ES.10555.1	chr14	-	1852	3	NNC	ENSMUSG00000115794.2	novel	1067	2	NA	NA	-39151	750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTGTACCTCAGCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	44380523	44329340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_44330684_44369824_44369989_44380178
ES.10555.2	chr14	-	1799	4	Fusion	ENSMUSG00000115794.2_ENSMUSG00000115056.2	novel	1067	2	NA	NA	-55	748	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGTTGTACCTCAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	44354289	44329342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_44330684_44330884_44330992_44343079_44343153_44354011
ES.10555.3	chr14	-	1907	5	Fusion	ENSMUSG00000115794.2_ENSMUSG00000115056.2	novel	1067	2	NA	NA	-30	587	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTATTAGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	44354264	44329503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_44330684_44330884_44330992_44341206_44341377_44342282_44342480_44354011
ES.10555.4	chr14	-	1543	3	Fusion	ENSMUSG00000115794.2_ENSMUSG00000115056.2	novel	1067	2	NA	NA	-35	587	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTATTAGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	44354269	44329503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_44330684_44347348_44347454_44354011
ES.10556.1	chr14	+	171	1	Antisense	novelGene_ENSMUSG00000115294.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATAGGATT	NA	False	NA	NA	False	NA	NA	NA	44429296	44429467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_44429300_44429500
ES.10557.1	chr14	-	1536	6	Fusion	ENSMUSG00000115294.2_ENSMUSG00000072595.4	novel	1287	4	NA	NA	44	-44	multi-exon	TRUE	canonical	0	0	junction_5	2.85657137141714	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTGATCTCCAGCTC	NA	False	NA	NA	False	AATAAA	-21	NA	44450650	44400669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_44401420_44406622_44406755_44407738_44407902_44408630_44408741_44411217_44411316_44450367
ES.10558.1	chr14	-	159	1	ISM	ENSMUSG00000115536.2	ENSMUST00000226371.2	1072	2	85823	2	6435	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	44463834	44463675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_44463700_44463800
ES.10559.1	chr14	-	653	2	Antisense	novelGene_ENSMUSG00000092144.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTGAAGTAAAGGCTC	NA	False	NA	NA	False	ATTAAA	-25	NA	44621872	44607200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_44607543_44621561
ES.1056.1	chr1	-	10130	24	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	10	intron_retention	FALSE	canonical	0	0	junction_21	117.130547755021	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCATTTTATTCTGT	NA	False	NA	0	True	AATAAA	-24	NA	93406537	93333651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336528_93336672_93336859_93340084_93340229_93341212_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366085_93368401_93368515_93369907_93369973_93406434
ES.1056.10	chr1	-	6382	29	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	145.011558300766	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406532	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93370371_93370514_93406434
ES.1056.11	chr1	-	6501	29	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	143.474607545043	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406537	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93389065_93389322_93406434
ES.1056.12	chr1	-	6318	28	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	108.478339167721	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406104	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93405928
ES.1056.13	chr1	-	4869	4	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	29539	-2062	29539	0	3prime_fragment	FALSE	canonical	3	627	junction_1	20.154955277108	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	4536	False	NA	-10	True	AATAAA	-14	NA	93338975	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672
ES.1056.14	chr1	-	9112	1	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	25740	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	698	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGTGATGGGACTCA	-6	True	NA	-11	True	AATAAA	-13	NA	93342774	93333662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93333700_93342800
ES.1056.15	chr1	-	6167	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	116.355911860344	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGTGATGGGACTCA	NA	False	NA	-11	True	AATAAA	-13	NA	93406568	93333662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.16	chr1	-	6274	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	112.669077335595	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGTGATGGGACTCA	NA	False	NA	-11	True	AATAAA	-13	NA	93406578	93333662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93369907_93369973_93406434
ES.1056.17	chr1	-	4895	20	NNC	ENSMUSG00000034088.16	novel	3808	25	NA	NA	11368	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	133.565363665851	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGTGATGGGACTCA	NA	False	NA	-11	True	AATAAA	-13	NA	93357146	93333662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353122_93355275_93355359_93355869_93355975_93357099
ES.1056.2	chr1	-	6353	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-115	-7	-101	7	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGACTCATTTTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	93406638	93333654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.21	chr1	-	8387	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	30	-2	intron_retention	FALSE	canonical	0	0	junction_27	172.264925012536	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93406069	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93389065_93389322_93402502_93402616_93405928
ES.1056.22	chr1	-	8499	12	NIC	ENSMUSG00000034088.16	novel	3808	25	NA	NA	14494	-2	intron_retention	FALSE	canonical	1	1	junction_5	173.091864015701	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93354020	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93341654_93344222_93344362_93344893_93345412_93347790_93348010_93348805_93348938_93349064_93351100_93351491_93351597_93352988
ES.1056.23	chr1	-	6198	28	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	140.311010609349	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93373370	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93369907_93369973_93373301
ES.1056.24	chr1	-	6185	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	147.590143573715	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93406529	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349137_93350985_93351065_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.26	chr1	-	6007	17	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	14045	-2060	14045	-2	3prime_fragment	FALSE	canonical	3	454	junction_10	63.2245193239933	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93354469	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988
ES.1056.27	chr1	-	6354	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-117	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.757822806421	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93406654	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336853_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.28	chr1	-	6294	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	114.235491855427	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTGATGGGACTC	NA	False	NA	-12	True	AATAAA	-12	NA	93406559	93333663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358922_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.29	chr1	-	6195	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	113.738322634305	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	-13	True	AATAAA	-11	NA	93406532	93333664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349110_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.3	chr1	-	6277	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-44	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	147.90098827243	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGACTCATTTTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	93406581	93333654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345368_93347794_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358922_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.30	chr1	-	6572	7	NIC	ENSMUSG00000034088.16	novel	3808	25	NA	NA	22687	-3	intron_retention	FALSE	canonical	3	484	junction_6	63.355259362494	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	-13	True	AATAAA	-11	NA	93345827	93333664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533
ES.1056.31	chr1	-	6391	29	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	144.38230059287	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAGTGTGATGGGACT	NA	False	NA	-13	True	AATAAA	-11	NA	93406586	93333664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369462_93369563_93369907_93369973_93406434
ES.1056.32	chr1	-	4129	11	NIC	ENSMUSG00000034088.16	novel	3808	25	NA	NA	20539	-4	intron_retention	FALSE	canonical	3	484	junction_7	64.6529968369603	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCAGTGTGATGGGAC	NA	False	NA	-14	True	AATAAA	-10	NA	93347975	93333665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345412_93347790
ES.1056.34	chr1	-	7440	27	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-62	-21	intron_retention	FALSE	canonical	0	0	junction_21	116.360488627409	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACCCAAAACCAG	NA	False	NA	-31	True	TATAAA	-5	NA	93406599	93333682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93357208_93357819_93358027_93358676_93358922_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.36	chr1	-	6114	27	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	1	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	114.99356812474	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACCCAAAACCAG	NA	False	NA	-31	True	TATAAA	-5	NA	93373370	93333682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93373301
ES.1056.39	chr1	-	4517	29	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	145.011558300766	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406020	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93378600_93378706_93405928
ES.1056.4	chr1	-	6250	27	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_26	113.819416038985	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGGACTCATTTTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	93406105	93333654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93405928
ES.1056.40	chr1	-	4457	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	114.235491855427	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406542	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358922_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.41	chr1	-	4547	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	-138	1822	-124	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406661	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.42	chr1	-	4646	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	-219	0	-219	0	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93373627	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ES.1056.43	chr1	-	5077	17	ISM	ENSMUSG00000034088.16	ENSMUST00000186164.7	3808	25	13155	-240	13155	0	intron_retention	FALSE	canonical	3	454	junction_10	63.2245193239933	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93355359	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988
ES.1056.44	chr1	-	5514	27	NIC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	1	0	intron_retention	FALSE	canonical	3	54	junction_26	106.71864796035	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93373370	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ES.1056.45	chr1	-	4647	29	NIC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	143.714121520781	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93405999	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93389065_93389322_93405928
ES.1056.46	chr1	-	5585	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-37	0	intron_retention	FALSE	canonical	3	431	junction_26	60.2562206761884	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406574	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.47	chr1	-	6517	9	NIC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	19119	0	intron_retention	FALSE	canonical	3	474	junction_8	64.1243908353132	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93349395	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336859_93340084_93341654_93342533_93342689_93344222_93344362_93344893_93348010_93348805_93348938_93349064
ES.1056.48	chr1	-	4496	28	NIC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	108.478339167721	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406104	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93405928
ES.1056.5	chr1	-	6287	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	-33	-1827	-33	5	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGGGACTCATTTTAT	NA	False	NA	-5	True	AATAAA	-19	NA	93373441	93333656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ES.1056.50	chr1	-	4395	28	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	141.360147700916	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93373375	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349141_93350973_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ES.1056.51	chr1	-	4500	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	114.189359734361	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406581	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359274_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.52	chr1	-	6760	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-41	0	intron_retention	FALSE	canonical	3	431	junction_26	60.3024551297421	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406578	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93368515_93369907_93369973_93406434
ES.1056.53	chr1	-	3614	23	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	9422	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	124.809143551463	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93359092	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358887_93359033
ES.1056.54	chr1	-	4405	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	113.877560412191	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406537	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366088_93368401_93368515_93369907_93369973_93406434
ES.1056.55	chr1	-	4350	27	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	114.99356812474	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406540	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93406434
ES.1056.56	chr1	-	4707	29	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	143.474607545043	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406565	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93389065_93389322_93406434
ES.1056.57	chr1	-	4645	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-31	0	intron_retention	FALSE	canonical	3	431	junction_26	51.6826914132379	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406568	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.58	chr1	-	4388	27	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_26	113.819416038985	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406072	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93405928
ES.1056.6	chr1	-	8110	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-31	0	intron_retention	FALSE	canonical	3	431	junction_26	60.4063165316598	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406568	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.60	chr1	-	4554	29	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	144.38230059287	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406568	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369462_93369563_93369907_93369973_93406434
ES.1056.61	chr1	-	4011	26	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	118.195593826504	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93406566	93335483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.63	chr1	-	4412	28	NNC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	141.239049613775	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGTTTGCCCTCTTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	93373405	93335487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345105_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ES.1056.65	chr1	-	3318	22	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	9779	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.739310931278	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGTTTGCCCTCTTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	93358735	93335487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335893_93336083_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676
ES.1056.69	chr1	-	4635	28	NIC	ENSMUSG00000034088.16	novel	4427	28	NA	NA	40	-6	combination_of_known_junctions	FALSE	canonical	1	8	junction_27	112.193065519297	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACGTTTGCCCTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	93373331	93335489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373010
ES.1056.7	chr1	-	7386	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-16	0	intron_retention	FALSE	canonical	3	431	junction_26	60.2562206761884	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406553	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.71	chr1	-	4586	29	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-28	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	145.011558300766	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406565	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93370371_93370514_93406434
ES.1056.72	chr1	-	6832	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-37	-7	intron_retention	FALSE	canonical	3	431	junction_26	60.4934956648355	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406574	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.73	chr1	-	4369	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	113.738322634305	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406532	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349110_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.74	chr1	-	4419	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.153596336751	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406568	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336119_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349153_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.75	chr1	-	4358	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	115	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	142.975244147221	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93405984	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93369907_93369973_93405928
ES.1056.77	chr1	-	4357	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	114.222234231637	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406523	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93351030_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.78	chr1	-	4797	30	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	166.407283694517	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAACGTTTGCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	93406537	93335490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93389065_93389322_93390520_93390646_93406434
ES.1056.79	chr1	-	4538	27	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	-67	-11	intron_retention	FALSE	canonical	0	0	junction_18	150.652996796569	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAAAACGTTTGCCC	NA	False	NA	NA	False	AATAAA	-16	NA	93406604	93335494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357146_93357208_93357819_93358027_93358676_93358922_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.8	chr1	-	7041	27	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	431	junction_26	60.1760730133964	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406537	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ES.1056.82	chr1	-	4401	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	112.669077335595	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAAAACGTTTGCCC	NA	False	NA	NA	False	AATAAA	-16	NA	93406537	93335494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93369907_93369973_93406434
ES.1056.84	chr1	-	4824	31	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	115	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	184.544029675546	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTGACTTTATAAAAG	NA	False	NA	NA	False	AATAAA	-1	NA	93405984	93335509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93378600_93378706_93389065_93389322_93402502_93402616_93405928
ES.1056.85	chr1	-	2461	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTGTATCTGTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	93387933	93385472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93385500_93387900
ES.1056.86	chr1	-	1558	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGCTTCATGTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	93400958	93399400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93399400_93401000
ES.1056.9	chr1	-	8498	15	NIC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	12741	0	intron_retention	FALSE	canonical	3	454	junction_8	67.4205503703796	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93355773	93333661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988
ES.10560.1	chr14	-	176	1	Intergenic	novelGene_8867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGTACATG	NA	False	NA	NA	False	NA	NA	NA	44671716	44671540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_44671500_44671700
ES.10561.1	chr14	-	1664	7	Fusion	ENSMUSG00000092165.10_ENSMUSG00000072574.5	novel	1734	6	NA	NA	42	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTTCACTCTAAGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	44865328	44709975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_44710176_44794789_44795368_44797289_44797472_44798155_44798288_44799238_44799402_44800129_44800261_44865050
ES.10561.2	chr14	-	1595	5	NNC	ENSMUSG00000092165.10	novel	1734	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.48746859276655	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTAAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	44865373	44794588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_44795368_44797289_44797472_44798155_44798304_44799238_44799402_44865050
ES.10561.3	chr14	-	2536	4	NIC	ENSMUSG00000092165.10	novel	1734	6	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTAAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	44865379	44794588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_44795368_44797289_44797472_44798155_44799402_44865050
ES.10561.4	chr14	-	3213	3	NIC	ENSMUSG00000092165.10	novel	1734	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTAAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	44865372	44794588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_44795368_44797289_44799402_44865050
ES.10562.1	chr14	-	176	1	Intergenic	novelGene_8868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGATGAAGT	NA	False	NA	NA	False	NA	NA	NA	44924426	44924250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_44924200_44924400
ES.10563.1	chr14	+	4673	1	Genic_Genomic	ENSMUSG00000115747.2	novel	NA	NA	NA	NA	10411	2864	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGAGACAGTGGCCG	NA	False	NA	NA	False	NA	NA	NA	45069790	45074463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_45069800_45074500
ES.10564.1	chr14	+	1635	2	FSM	ENSMUSG00000037759.7	ENSMUST00000046891.6	3684	2	897	1152	426	-1152	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTGTTCTTCAGTTTT	6789	False	NA	NA	False	ATTAAA	-13	NA	45226548	45240125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45227265_45239206
ES.10565.1	chr14	+	3051	2	Antisense	novelGene_ENSMUSG00000021830.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	45385099	45390952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_45385638_45388439
ES.10566.1	chr14	+	185	1	Intergenic	novelGene_8870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	45454678	45454863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_45454700_45454900
ES.10567.1	chr14	+	4222	7	FSM	ENSMUSG00000049092.12	ENSMUST00000146150.3	3917	7	-303	-2	-27	2	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCATTTGAAGGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	45457146	45520184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45457876_45481611_45481656_45483744_45483974_45514841_45514992_45516116_45516243_45516388_45516508_45517359
ES.10567.2	chr14	+	1834	2	FSM	ENSMUSG00000049092.12	ENSMUST00000227056.2	509	2	-296	-1029	2	544	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACCAAACTTTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	45457177	45459158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45457876_45458022
ES.10567.3	chr14	+	4157	2	FSM	ENSMUSG00000049092.12	ENSMUST00000226915.2	735	2	-233	-3189	-32	-367	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTGGTTTGTTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	45457394	45461803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45457876_45458127
ES.10567.4	chr14	+	1661	1	FSM	ENSMUSG00000049092.12	ENSMUST00000227086.2	4997	1	1579	1757	1125	-531	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAAAAGTGTGGATTT	NA	False	NA	NA	False	NA	NA	NA	45458752	45460413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45458800_45460400
ES.10568.1	chr14	+	7539	2	Antisense	novelGene_ENSMUSG00000021831.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAGGAAGACAGAAGG	NA	False	NA	NA	False	NA	NA	NA	45540076	45548794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_45542787_45543965
ES.10568.2	chr14	+	2149	1	Antisense	novelGene_ENSMUSG00000021831.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCAAAGTTGTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	45541541	45543690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_45541500_45543700
ES.10569.1	chr14	+	1543	1	Intergenic	novelGene_8872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	8968	False	NA	NA	False	NA	NA	NA	45552651	45554194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_45552700_45554200
ES.1057.1	chr1	-	1641	1	Antisense	novelGene_ENSMUSG00000026276.21_AS_novelGene_ENSMUSG00000116048.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGGAAAAGAAAAA	8353	False	NA	NA	False	NA	NA	NA	93437298	93435657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93435700_93437300
ES.10570.1	chr14	-	5151	22	NNC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	-20	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	11.1978698978615	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	45456902	45370899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45430387_45430452_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.11	chr14	-	3534	21	NNC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	9	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.56679636737094	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	45456873	45372355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379523_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.12	chr14	-	3744	21	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	0	8	intron_retention	FALSE	canonical	0	0	junction_3	11.2172857679565	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	45456882	45372355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
ES.10570.13	chr14	-	2989	16	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-2446	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	9.81970807441172	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45423014	45372363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45422894
ES.10570.14	chr14	-	3151	17	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	1391	0	intron_retention	FALSE	non_canonical	0	0	junction_4	11.3688170009021	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45455430	45372363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382527_45398780_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227
ES.10570.15	chr14	-	3701	23	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	11.5315772003344	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456896	45372363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45372472_45372659_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
ES.10570.16	chr14	-	3758	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-13	0	intron_retention	FALSE	canonical	2	4	junction_20	11.0091695444732	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456895	45372363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456803
ES.10570.17	chr14	-	3829	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	3	0	intron_retention	FALSE	canonical	2	4	junction_20	9.63859400177566	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456836	45372363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
ES.10570.2	chr14	-	4996	21	NNC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	3	22	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	8.56679636737094	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	45456879	45370899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379523_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.20	chr14	-	3638	23	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-13	-26	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	13.0965896765923	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCTGACTATTAAAAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	45456895	45372389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455320_45455410_45455500_45456452_45456507_45456803
ES.10570.21	chr14	-	2324	16	NIC	ENSMUSG00000021830.15	novel	4028	21	NA	NA	9	-544	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	12.7156945893211	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTTTCCTCACTAAGG	NA	False	NA	NA	False	NA	NA	NA	45456873	45372907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45456452_45456507_45456803
ES.10570.22	chr14	-	2507	20	ISM	ENSMUSG00000021830.15	ENSMUST00000022377.11	4028	21	97	5871	67	-5412	5prime_fragment	FALSE	canonical	3	25	junction_18	5.2547300944626	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCGGGATGGAGACAC	NA	False	NA	NA	False	AATGAA	-21	NA	45456754	45377775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.23	chr14	-	202	1	Intergenic	novelGene_8869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5514	False	NA	NA	False	NA	NA	NA	45383290	45383088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45383100_45383300
ES.10570.24	chr14	-	3846	5	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	0	-3	intron_retention	FALSE	canonical	2	4	junction_3	14.5322916293336	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTATCCCCAGTGATT	NA	False	NA	NA	False	NA	NA	NA	45456847	45445588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
ES.10570.3	chr14	-	4239	22	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	1	5	intron_retention	FALSE	canonical	0	0	junction_3	11.2838053438788	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTATCTGAGTC	NA	False	NA	NA	False	ATTAAA	-39	NA	45456850	45371899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379523_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
ES.10570.4	chr14	-	4041	21	FSM	ENSMUSG00000021830.15	ENSMUST00000022377.11	4028	21	-8	-5	0	5	multi-exon	FALSE	canonical	3	11	junction_1	7.23100961138899	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTTATCTGAGTC	NA	False	NA	NA	False	ATTAAA	-39	NA	45456859	45371899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.5	chr14	-	4110	23	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	5	-197	intron_retention	FALSE	canonical	0	0	junction_15	13.7210250683256	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTTACAATGTATGTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	45456877	45372101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45438094_45438203_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456803
ES.10570.6	chr14	-	4015	22	NNC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-14	-198	intron_retention	FALSE	canonical	1	1	junction_20	11.3696895854654	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTTACAATGTATGTAA	NA	False	NA	NA	False	AATAAA	-13	NA	45456896	45372102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455495_45456452_45456507_45456803
ES.10570.7	chr14	-	4133	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-238	10	intron_retention	FALSE	canonical	0	0	junction_21	9.9968248927601	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGCATTGTACATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	45458023	45372353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673_45457009_45457626
ES.10570.8	chr14	-	3649	21	NNC	ENSMUSG00000021830.15	novel	5045	21	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.7669633602051	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	45456859	45372355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45373431_45377874_45378066_45379429_45379587_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406629_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ES.10570.9	chr14	-	3488	21	NIC	ENSMUSG00000021830.15	novel	4028	21	NA	NA	-10	8	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	9.22212014669078	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTTGCATTGTACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	45456892	45372355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456803
ES.10571.1	chr14	-	2004	1	Intergenic	novelGene_8871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATGTGTGAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	45466366	45464362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45464400_45466400
ES.10572.1	chr14	-	6407	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	2024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATCTTGTAGAGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	45555994	45518519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.11	chr14	-	4380	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGGTCTTTGGTCAG	NA	False	NA	87	True	AATAAA	-18	NA	45555996	45520545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536493_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.12	chr14	-	4332	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.192225519798	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTGGTCTTTGGTCA	NA	False	NA	86	True	AATAAA	-17	NA	45555995	45520546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523497_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.14	chr14	-	4271	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTTTGGTCTTTGGT	NA	False	NA	84	True	AATAAA	-15	NA	45555992	45520548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45520673_45520777_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.18	chr14	-	4370	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	223.557427676621	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATCTTTGGTCTTTG	NA	False	NA	82	True	AATAAA	-13	NA	45556191	45520550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536367_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45556159
ES.10572.19	chr14	-	4370	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	232.509249322276	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATCTTTGGTCTTTG	NA	False	NA	82	True	AATAAA	-13	NA	45555995	45520550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536534_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.2	chr14	-	4377	14	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	180.091199775798	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTGGTCAGTTAC	NA	False	NA	91	True	AATAAA	-22	NA	45555994	45520541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531881_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.21	chr14	-	4375	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	276.654987705305	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATCTTTGGTCTTTG	NA	False	NA	82	True	AATAAA	-13	NA	45556212	45520550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45528280_45528388_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45556159
ES.10572.22	chr14	-	4177	13	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	48	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.29838317366	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTGCAGGTACCTTC	NA	False	NA	-3	True	NA	NA	NA	45555981	45520635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45542693_45542790_45543968_45544089_45555833
ES.10572.23	chr14	-	4432	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTGCAGGTACCTT	NA	False	NA	-4	True	NA	NA	NA	45556194	45520636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45522754_45522811_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.24	chr14	-	4234	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	-39	-96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	223.557427676621	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTGACTGCAGGTAC	NA	False	NA	-7	True	NA	NA	NA	45556267	45520639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45556159
ES.10572.28	chr14	-	4480	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	38	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTCTGACTGCAGG	NA	False	NA	-10	True	NA	NA	NA	45556190	45520642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.3	chr14	-	4593	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTGGTCAGTTAC	NA	False	NA	91	True	AATAAA	-22	NA	45556202	45520541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.30	chr14	-	4270	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	110	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	232.341859758241	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTCTGACTGCAGG	NA	False	NA	-10	True	NA	NA	NA	45555919	45520642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536602_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.32	chr14	-	4206	14	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	236.844517445068	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACAGCTGTTCTGACT	NA	False	NA	-15	True	NA	NA	NA	45555995	45520647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.34	chr14	-	4120	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACATGACAGCTGTTC	NA	False	NA	-20	True	NA	NA	NA	45555994	45520652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45522345_45522498_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.36	chr14	-	4296	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	5	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	227.876991970203	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	-22	True	NA	NA	NA	45556024	45520654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525318_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.37	chr14	-	4232	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	37	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	-22	True	NA	NA	NA	45555992	45520654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523099_45523136_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.38	chr14	-	4297	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	2	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	-22	True	NA	NA	NA	45556027	45520654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.41	chr14	-	4267	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	34	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	230.88304310156	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	-22	True	NA	NA	NA	45555995	45520654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539218_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.42	chr14	-	4309	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	-14	-116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	232.509249322276	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCTTCACATGACA	NA	False	NA	-27	True	NA	NA	NA	45556043	45520659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536534_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.43	chr14	-	3250	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555994	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45521622_45522637_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.47	chr14	-	4272	14	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	180.091199775798	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555994	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531899_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.48	chr14	-	4196	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555994	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45522939_45523008_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.49	chr14	-	4210	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	31	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555998	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45521567_45521626_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.51	chr14	-	4373	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	257.201814405212	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555994	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45528280_45528388_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.52	chr14	-	4915	14	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	144	-117	intron_retention	FALSE	non_canonical	0	0	junction_7	183.304480426362	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555885	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.53	chr14	-	4260	14	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	39	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	180.091199775798	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555990	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531856_45536467_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.54	chr14	-	4222	16	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	14	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.823684003463	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45556015	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523327_45523383_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.55	chr14	-	4252	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	37	-117	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCTTCACATGAC	NA	False	NA	-28	True	NA	NA	NA	45555992	45520660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.56	chr14	-	3212	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	-23	-1229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCAGTTTTCTTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	45556052	45521772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.6	chr14	-	7842	9	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	224.229792846535	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGGTCTTTGGTCAG	NA	False	NA	87	True	AATAAA	-18	NA	45555994	45520545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45528736_45538296_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.60	chr14	-	3146	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	32	-1232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.639737711466	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTCAGTTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	45555997	45521775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.61	chr14	-	3333	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	37	-1233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	232.228698414617	660	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTAGGTCAGTTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	45556191	45521776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530629_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.62	chr14	-	1829	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	31	2092	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	619	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGTTATCAGCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	45555998	45523101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.63	chr14	-	1681	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	2	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.639737711466	612	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATATACAAATTTTAATA	NA	False	NA	41	True	AATAGA	-13	NA	45556027	45523278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45532003_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.65	chr14	-	4661	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	1866	intron_retention	FALSE	canonical	2	351	junction_7	99.7495844193686	611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGTTCATGTTTA	NA	False	NA	-8	True	AGTAAA	-11	NA	45555994	45523327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.66	chr14	-	1591	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	35	1866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.639737711466	611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGTTCATGTTTA	NA	False	NA	-8	True	AGTAAA	-11	NA	45555994	45523327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10572.7	chr14	-	4511	15	NNC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	96	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.639737711466	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGGTCTTTGGTCAG	NA	False	NA	87	True	AATAAA	-18	NA	45556132	45520545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536498_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ES.10573.1	chr14	+	2269	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	-45	10	-45	-10	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGACTAACCATAAATGA	NA	False	NA	NA	False	AATAAA	-29	NA	45567199	45587152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.10	chr14	+	2333	15	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	607.179074550028	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACCAAAGGACTAACCA	NA	False	NA	NA	False	AATAAA	-22	NA	45567284	45587145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45567822_45567979_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.11	chr14	+	1639	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-632	intron_retention	FALSE	canonical	3	1632	junction_4	88.2680183053611	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567284	45586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.12	chr14	+	1997	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	197	0	-197	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGAGAGTGTCTACTCT	NA	False	NA	NA	False	AGTAAA	-5	NA	45567284	45586965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.14	chr14	+	1480	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-885	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	461.412777759015	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567284	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.15	chr14	+	4453	12	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-886	intron_retention	FALSE	canonical	3	1632	junction_5	94.4590514280882	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATAATAGTATGTAATT	NA	False	NA	18	True	AATAAA	-11	NA	45567284	45586276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.16	chr14	+	1287	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	636.161910468837	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAACATAATAGTATGT	NA	False	NA	14	True	AATAAA	-7	NA	45567286	45586272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567384_45568290_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581180_45584200_45584273_45586039
ES.10573.17	chr14	+	1459	15	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-880	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	610.83850449315	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGTAATTCAGTAA	NA	False	NA	24	True	AATAAA	-17	NA	45567286	45586282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45567822_45567970_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.18	chr14	+	4376	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-880	intron_retention	FALSE	canonical	3	1632	junction_5	92.9194319468933	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGTAATTCAGTAA	NA	False	NA	24	True	AATAAA	-17	NA	45567286	45586282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.19	chr14	+	1550	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	477.345086243639	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATACTCTTGTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	45567286	45586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574941_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.2	chr14	+	1409	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	-16	841	-16	-841	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGTCATGTTTGGTG	NA	False	NA	63	True	TTTAAA	-11	NA	45567228	45586321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.20	chr14	+	5243	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2	-13	intron_retention	FALSE	canonical	3	1632	junction_5	92.9194319468933	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAGGACTAACCATAAA	NA	False	NA	NA	False	AATAAA	-26	NA	45567286	45587149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.21	chr14	+	4005	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-880	intron_retention	FALSE	canonical	3	1632	junction_4	89.7804033925741	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGTAATTCAGTAA	NA	False	NA	24	True	AATAAA	-17	NA	45567287	45586282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.22	chr14	+	1438	15	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	611.188374882766	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567287	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45567822_45567955_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.23	chr14	+	5704	11	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-17	intron_retention	FALSE	canonical	3	1632	junction_5	97.0626601737249	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACCAAAGGACTAACCA	NA	False	NA	NA	False	AATAAA	-22	NA	45567287	45587145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.25	chr14	+	1547	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	475.117089274539	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567287	45586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575011_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.26	chr14	+	1387	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-885	intron_retention	FALSE	canonical	3	1632	junction_5	95.5156691624759	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567287	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.27	chr14	+	1294	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	479.407832458425	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACATAATAGTATGTAAT	NA	False	NA	17	True	AATAAA	-10	NA	45567287	45586275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572383_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.28	chr14	+	4703	12	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-633	intron_retention	FALSE	canonical	3	1632	junction_5	94.4590514280882	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATACTCTTGTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	45567287	45586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.29	chr14	+	2345	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-17	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	461.412777759015	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACCAAAGGACTAACCA	NA	False	NA	NA	False	AATAAA	-22	NA	45567287	45587145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.3	chr14	+	3014	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	7	-885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	477.579089766552	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567251	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584948_45585042
ES.10573.31	chr14	+	1284	13	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-3	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	492.430282713536	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567289	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568387_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.32	chr14	+	1727	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-3	-633	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	461.412777759015	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATACTCTTGTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	45567289	45586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.33	chr14	+	5417	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	39	junction_1	474.703152858008	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAACCATAAATGATCC	NA	False	NA	NA	False	AATAAA	-32	NA	45567289	45587155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.36	chr14	+	1235	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	3	-941	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	475.117089274539	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTATGTATTGGC	NA	False	NA	-37	True	AATAAA	-8	NA	45567295	45586221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578093_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.38	chr14	+	1547	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-4	-885	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	471.129060572553	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567297	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567641_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.4	chr14	+	1591	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	11	632	11	-632	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567255	45586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.40	chr14	+	1216	9	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	5127	634	285	-634	3prime_fragment	FALSE	canonical	3	1685	junction_4	56.7472466292418	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATACTCTTGTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	45572371	45586528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.41	chr14	+	4196	8	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	363	-640	intron_retention	FALSE	canonical	3	1685	junction_3	47.6256662067068	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTATATATACTCTTGT	NA	False	NA	22	True	AATAAA	-14	NA	45572449	45586522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45572489_45574934_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.42	chr14	+	4378	3	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	2962	-20	intron_retention	FALSE	canonical	3	1732	junction_1	23.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAATACCAAAGGACTAA	7335	False	NA	NA	False	AATAAA	-19	NA	45580872	45587142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45580979_45581103_45584273_45586039
ES.10573.43	chr14	+	3437	2	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	14083	631	3417	-631	3prime_fragment	FALSE	canonical	3	1779	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	7790	False	NA	31	True	AATAAA	-23	NA	45581327	45586531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_45584273_45586039
ES.10573.5	chr14	+	1470	15	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-5	-885	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	607.179074550028	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567279	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45567822_45567979_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.6	chr14	+	1296	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-5	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	479.408054625949	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567279	45586277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569398_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.7	chr14	+	2167	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	-4	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	475.117089274539	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAGGACTAACCATAA	NA	False	NA	NA	False	AATAAA	-25	NA	45567280	45587148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575015_45578095_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.8	chr14	+	1559	14	NNC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	475.117089274539	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567284	45586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575027_45578093_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10573.9	chr14	+	7072	12	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-632	intron_retention	FALSE	canonical	3	1632	junction_5	96.3586619642323	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTCTTGTCTTTTCTA	NA	False	NA	30	True	AATAAA	-22	NA	45567284	45586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ES.10574.1	chr14	+	4423	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	-64	8615	-64	9	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGAGAAGCTCATTCAT	NA	False	NA	4	True	ATTAAA	-25	NA	45588485	45614349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.11	chr14	+	2878	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	90	10006	6	1200	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGAGGTTATTGACA	NA	False	NA	NA	False	TATAAA	-34	NA	45588639	45612958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.12	chr14	+	4223	10	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	78.5098877157254	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588643	45614340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605183_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.13	chr14	+	3587	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	129	9258	0	-634	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAATTATGAAGTTG	NA	False	NA	NA	False	NA	NA	NA	45588678	45613706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.14	chr14	+	4003	8	NIC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	0	-33	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	94.6337731489565	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTGGTTGTATTAAAAC	NA	False	NA	-38	True	ATTAAA	-15	NA	45588678	45614307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.15	chr14	+	3904	11	NNC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	0	-321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.189118404086	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGGTTTACATGTTCT	NA	False	NA	NA	False	NA	NA	NA	45588678	45614019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605180_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.16	chr14	+	4185	11	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	1	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.3004413606885	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGTGGTTGTATTAA	NA	False	NA	-41	True	ATTAAA	-12	NA	45588679	45614304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596823_45604063_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.17	chr14	+	4447	10	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	1	267	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	77.5313556640867	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGGAAAAGGCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	45588679	45614607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.18	chr14	+	3712	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	130	9132	1	-508	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATTTACAGTATCTTT	NA	False	NA	NA	False	TTTAAA	-40	NA	45588679	45613832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.19	chr14	+	4277	12	FSM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	1	-2548	1	-34	multi-exon	FALSE	canonical	2	2	junction_3	88.5079255917908	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGGTTGTATTAAAA	NA	False	NA	-39	True	ATTAAA	-14	NA	45588679	45614306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45595673_45595765_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.2	chr14	+	4591	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	27	8356	27	268	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGGGAAAAGGCTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	45588576	45614608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.20	chr14	+	1946	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	131	10897	2	309	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTTGGAATGAGACA	NA	False	NA	NA	False	ATTAAA	-20	NA	45588680	45612067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.21	chr14	+	4259	10	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-2	-33	intron_retention	FALSE	canonical	3	78	junction_6	61.2894367874954	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTGGTTGTATTAAAAC	NA	False	NA	-38	True	ATTAAA	-15	NA	45588681	45614307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.22	chr14	+	2118	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	133	10723	-1	483	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGCATTAGCAAAATCA	NA	False	NA	NA	False	NA	NA	NA	45588682	45612241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.23	chr14	+	1385	10	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	5	-150	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	63.4402606131679	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTATCTTTAAATCATGA	NA	False	NA	NA	False	TTTAAA	-10	NA	45588688	45611608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45610968
ES.10574.24	chr14	+	3951	8	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.1509698973874	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACTCTTGTGCCATTG	NA	False	NA	-25	True	ATTAAA	-28	NA	45588697	45614320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605791_45610968
ES.10574.25	chr14	+	4067	9	NIC	ENSMUSG00000053205.10	novel	4168	10	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	98.0012755019035	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATTGAGAAGCTCATT	NA	False	NA	1	True	ATTAAA	-22	NA	45588700	45614346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45604055_45604117_45605138_45605176_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.26	chr14	+	4150	12	NNC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.8986414971881	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGATTGAGAAGCT	NA	False	NA	-3	True	ATTAAA	-18	NA	45588701	45614342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588837_45588886_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.27	chr14	+	2211	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	152	10611	3	595	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAAGTGTTTTTAACT	NA	False	NA	NA	False	AAAACA	-29	NA	45588701	45612353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.29	chr14	+	2024	12	FSM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	32	-326	12	326	multi-exon	FALSE	canonical	2	2	junction_3	88.5079255917908	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCCTTCTATTTTCTG	NA	False	NA	NA	False	ATTAAA	-37	NA	45588710	45612084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45595673_45595765_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.3	chr14	+	4274	10	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-41	7	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	77.5313556640867	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGAGAAGCTCATTC	NA	False	NA	2	True	ATTAAA	-23	NA	45588592	45614347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.30	chr14	+	4062	12	NNC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	14	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.8986414971881	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGTGGTTGTATTAA	NA	False	NA	-41	True	ATTAAA	-12	NA	45588712	45614304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588830_45588918_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.31	chr14	+	3988	7	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	89.6872652919887	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGATTGAGAAGCT	NA	False	NA	-3	True	ATTAAA	-18	NA	45588712	45614342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45609841_45609936_45610968
ES.10574.32	chr14	+	3989	7	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	7729	-31	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	76.8542993809282	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGTTGTATTAAAACTC	NA	False	NA	-36	True	ATTAAA	-17	NA	45596427	45614309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45610968
ES.10574.33	chr14	+	5720	5	NIC	ENSMUSG00000053205.10	novel	4168	10	NA	NA	-3134	-38	intron_retention	FALSE	canonical	3	151	junction_1	51.8025095917177	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTGGTGGTTGTATT	NA	False	NA	-43	True	ATTAAA	-10	NA	45602687	45614302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45604117_45605138_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.34	chr14	+	6350	4	NIC	ENSMUSG00000053205.10	novel	4168	10	NA	NA	-2432	1	intron_retention	FALSE	canonical	3	151	junction_1	59.6340693079235	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCAATGATTGAGAAGC	NA	False	NA	-4	True	ATTAAA	-17	NA	45603389	45614341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45604117_45605138_45605929_45608475_45609936_45610968
ES.10574.35	chr14	+	4068	7	ISM	ENSMUSG00000053205.10	ENSMUST00000226785.2	4168	10	15046	36	-2142	-36	3prime_fragment	FALSE	canonical	3	78	junction_2	76.0606483158159	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGTGGTTGTATTAA	NA	False	NA	-41	True	ATTAAA	-12	NA	45603679	45614304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.36	chr14	+	3598	5	ISM	ENSMUSG00000053205.10	ENSMUST00000226785.2	4168	10	17128	34	-60	-34	3prime_fragment	FALSE	canonical	3	106	junction_1	68.7618171662152	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGGTTGTATTAAAA	NA	False	NA	-39	True	ATTAAA	-14	NA	45605761	45614306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.4	chr14	+	4337	11	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_3	78.8901134490248	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588618	45614340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594280_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.5	chr14	+	4324	11	NIC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	-14	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	93.1337210681502	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGAGAAGCTCATTC	NA	False	NA	2	True	ATTAAA	-23	NA	45588619	45614347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45595673_45595765_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.6	chr14	+	4419	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	70	8485	-14	139	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCTACAACTGTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	45588619	45614479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.7	chr14	+	4190	10	FSM	ENSMUSG00000053205.10	ENSMUST00000226785.2	4168	10	-13	-9	-13	9	multi-exon	FALSE	canonical	1	1	junction_3	83.3410366809877	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGAGAAGCTCATTCAT	NA	False	NA	4	True	ATTAAA	-25	NA	45588620	45614349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10574.8	chr14	+	4192	10	NIC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-13	7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	63.4402606131679	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGAGAAGCTCATTC	NA	False	NA	2	True	ATTAAA	-23	NA	45588620	45614347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45610968
ES.10574.9	chr14	+	4597	11	NNC	ENSMUSG00000053205.10	novel	12974	11	NA	NA	-8	267	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	78.8901134490248	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGGAAAAGGCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	45588625	45614607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45588987_45592402_45592436_45594169_45594280_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ES.10575.1	chr14	-	1181	1	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	1285	False	NA	NA	False	NA	NA	NA	45597373	45596192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596200_45597400
ES.10575.10	chr14	-	3188	5	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45603230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45604112_45605133_45605174_45605761_45605926_45608472_45609934_45610966
ES.10575.11	chr14	-	6776	1	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	AATACA	-3	NA	45611608	45604832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45604800_45611600
ES.10575.12	chr14	-	1843	1	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-45	NA	45611608	45609765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45609800_45611600
ES.10575.2	chr14	-	1617	8	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	NA	False	NA	NA	False	NA	NA	NA	45611608	45596192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596812_45604053_45604112_45605133_45605174_45605761_45605802_45605875_45605926_45608472_45608547_45609839_45609934_45610966
ES.10575.3	chr14	-	2279	6	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	NA	False	NA	NA	False	NA	NA	NA	45611608	45596192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596812_45604053_45604112_45605133_45605926_45608472_45608547_45609839_45609934_45610966
ES.10575.4	chr14	-	1603	7	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	NA	False	NA	NA	False	NA	NA	NA	45611608	45596192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596812_45604053_45604120_45605743_45605802_45605875_45605926_45608472_45608547_45609839_45609934_45610966
ES.10575.5	chr14	-	3546	5	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45596218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596812_45604053_45604112_45605133_45605926_45608472_45609934_45610966
ES.10575.6	chr14	-	1665	7	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45596218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45596812_45604053_45604112_45605133_45605174_45605761_45605926_45608472_45608547_45609839_45609934_45610966
ES.10575.7	chr14	-	5067	4	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCTAAAAGGGACGGAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45603193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45604112_45605133_45608547_45609839_45609934_45610966
ES.10575.8	chr14	-	3151	6	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCTAAAAGGGACGGAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45603193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45604112_45605133_45605174_45605761_45605802_45605875_45605926_45608472_45609934_45610966
ES.10575.9	chr14	-	1821	7	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45611608	45603230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45604112_45605133_45605174_45605761_45605802_45605875_45605926_45608472_45608547_45609839_45609934_45610966
ES.10576.1	chr14	-	2759	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	33	-4	33	4	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCATCAGGTAACTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	45626385	45613786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.10	chr14	-	375	5	NNC	ENSMUSG00000037722.9	novel	1490	5	NA	NA	3	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	593.6330411121	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	45620897	45613933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45613998_45615867_45615944_45618393_45618454_45619012_45619141_45620850
ES.10576.11	chr14	-	2046	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	21	721	21	-721	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCGTCTTACAGAAACAG	NA	False	NA	-2	True	AATAAA	-25	NA	45626397	45614511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.12	chr14	-	1913	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-30	-721	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCGTCTTACAGAAACAG	NA	False	NA	-2	True	AATAAA	-25	NA	45626448	45614511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ES.10576.13	chr14	-	2026	7	NNC	ENSMUSG00000037722.9	novel	710	7	NA	NA	-30	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	577.563560715759	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTAAATCGTCTTACAG	NA	False	NA	-8	True	AATAAA	-19	NA	45626280	45614517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616128_45616232_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.14	chr14	-	1938	7	NNC	ENSMUSG00000037722.9	novel	710	7	NA	NA	-12	-774	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	576.624564937091	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGTGATGTTAGTAT	NA	False	NA	-6	True	ATTAAA	-13	NA	45626262	45614564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616334_45616415_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.15	chr14	-	2316	6	NIC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-1	-777	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	486.765898559051	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTCTGTGATGTTAG	NA	False	NA	-9	True	ATTAAA	-10	NA	45626248	45614567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45625729
ES.10576.16	chr14	-	1653	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	19	1116	19	704	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTCTTGTGTTTTTC	NA	False	NA	0	True	ATTAAA	-31	NA	45626399	45614906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.18	chr14	-	1524	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-29	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	593.891033776399	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGTCTTGTGTTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	45626279	45614908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618389_45618456_45619012_45619141_45620850_45620903_45622037_45622206_45626204
ES.10576.2	chr14	-	2618	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	571.773171808542	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	45626434	45613790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618393_45618454_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ES.10576.20	chr14	-	1729	7	NNC	ENSMUSG00000037722.9	novel	710	7	NA	NA	-23	702	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	575.212617695019	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGTCTTGTGTTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	45626273	45614908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616334_45616539_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.21	chr14	-	1798	8	NNC	ENSMUSG00000037722.9	novel	710	7	NA	NA	54	701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	606.019060790019	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCTTGTCTTGTGTTT	NA	False	NA	-3	True	ATTAAA	-28	NA	45626364	45614909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616128_45616232_45616334_45616415_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.23	chr14	-	5222	5	FSM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	-3040	-692	217	692	multi-exon	FALSE	canonical	3	1091	junction_1	77.5387000148958	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATGTTAGAATCTTGT	NA	False	NA	-12	True	ATTAAA	-19	NA	45625981	45614918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037
ES.10576.24	chr14	-	7193	4	NIC	ENSMUSG00000037722.9	novel	1490	5	NA	NA	-1	686	intron_retention	FALSE	canonical	3	1091	junction_1	78.1636459970718	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTCTTTCATGTTAGAA	NA	False	NA	-18	True	ATTAAA	-13	NA	45626248	45614924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45615944_45618393_45618456_45619012_45620914_45622037
ES.10576.26	chr14	-	2158	1	NIC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	3817	685	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTCTTTCATGTTAGA	NA	False	NA	-19	True	ATTAAA	-12	NA	45617083	45614925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45614900_45617100
ES.10576.27	chr14	-	1035	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	114	1639	-54	181	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGACTTAAGGTGCAC	NA	False	NA	NA	False	CATAAA	-22	NA	45626304	45615429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.28	chr14	-	3644	5	NNC	ENSMUSG00000037722.9	novel	1490	5	NA	NA	1231	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	514.291259890735	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATAAGGGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	45624967	45615480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618393_45618454_45619012_45619141_45620850_45620914_45622037
ES.10576.3	chr14	-	4689	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	489.203597697319	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	45626260	45613790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616334_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.30	chr14	-	933	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-21	128	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGAATAAGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	45626439	45615482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ES.10576.31	chr14	-	918	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	62	1808	62	12	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTCTTGCATTGTAT	NA	False	NA	NA	False	AATAAA	-40	NA	45626356	45615598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.32	chr14	-	4821	5	FSM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	-3341	10	-32	0	multi-exon	FALSE	canonical	3	1091	junction_1	77.5387000148958	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATATTTTCAACT	NA	False	NA	NA	False	AATAAA	-18	NA	45626282	45615620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037
ES.10576.5	chr14	-	2666	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-97	-113	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	606.566401970963	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCAGCTATTTCCTAC	NA	False	NA	NA	False	AATAAA	-25	NA	45622206	45613903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45616334_45616539_45618393_45618456_45619012_45619141_45620850_45620914_45622037
ES.10576.6	chr14	-	2648	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	27	113	27	-113	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCAGCTATTTCCTAC	NA	False	NA	NA	False	AATAAA	-25	NA	45626391	45613903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ES.10576.7	chr14	-	2790	6	NIC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-1	-114	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	483.994628069362	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTCAGCTATTTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	45626248	45613904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45625918
ES.10576.9	chr14	-	2486	6	NNC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-25	-143	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	472.912930675405	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	45626443	45613933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626388
ES.10577.1	chr14	-	165	1	Intergenic	novelGene_8873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	45687682	45687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45687500_45687700
ES.10578.1	chr14	+	2685	1	Antisense	novelGene_ENSMUSG00000037712.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAATCTCAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	45714861	45717546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_45714900_45717500
ES.10579.1	chr14	+	6740	1	Antisense	novelGene_ENSMUSG00000037712.18_AS_novelGene_ENSMUSG00000115275.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGAGAGAAACCCTGT	NA	False	NA	NA	False	NA	NA	NA	45720551	45727291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_45720600_45727300
ES.1058.1	chr1	+	3932	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	2	3	2	-3	multi-exon	FALSE	canonical	0	0	junction_19	3.25017068281892	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTCAGGAAGTTCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	93439802	93549695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
ES.1058.2	chr1	+	14819	13	FSM	ENSMUSG00000034066.14	ENSMUST00000122402.3	2816	13	-2	-12001	-2	12001	multi-exon	FALSE	canonical	1	2	junction_10	3.685557397916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATGGGCTTTTTAG	NA	False	NA	NA	False	AATAAA	-23	NA	93439831	93521019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461
ES.1058.3	chr1	+	3713	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	34	190	1	-190	multi-exon	FALSE	canonical	0	0	junction_19	3.25017068281892	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCATCCCCTTTGCCCTA	NA	False	NA	NA	False	NA	NA	NA	93439834	93549508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
ES.1058.4	chr1	+	163	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACATTCATACACA	6092	False	NA	NA	False	NA	NA	NA	93496025	93496188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93496000_93496200
ES.10580.1	chr14	-	3448	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	-149	-6	-149	6	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTACTTCTGATCTCT	NA	False	NA	1	True	AATAAA	-26	NA	45767724	45696245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.11	chr14	-	3360	15	NNC	ENSMUSG00000037712.18	novel	3293	15	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	99.6376342717214	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTCTTTTGTACTTC	NA	False	NA	-7	True	AATAAA	-18	NA	45767629	45696253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706847_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.13	chr14	-	2987	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	54	252	54	-252	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTGCTAAATTACGAAT	NA	False	NA	NA	False	AATATA	-20	NA	45767521	45696503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.14	chr14	-	2484	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	-149	958	-149	-958	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTATCATGATACCT	NA	False	NA	-1	True	AATAAA	-16	NA	45767724	45697209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.16	chr14	-	179	1	Intergenic	novelGene_8874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACAC	NA	False	NA	NA	False	NA	NA	NA	45698005	45697826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45697800_45698000
ES.10580.2	chr14	-	3108	12	NIC	ENSMUSG00000037712.18	novel	3293	15	NA	NA	14259	4	intron_retention	FALSE	canonical	3	310	junction_10	27.1965603075459	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTACTTCTGATCT	NA	False	NA	-1	True	AATAAA	-24	NA	45742138	45696247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713571_45719888_45720024_45741953
ES.10580.5	chr14	-	3783	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	65591	0	13334	0	3prime_fragment	FALSE	canonical	3	392	junction_2	11	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	-5	True	AATAAA	-20	NA	45701984	45696251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_45697481_45699223_45699366_45699572
ES.10580.6	chr14	-	4969	14	NIC	ENSMUSG00000037712.18	novel	3293	15	NA	NA	67	0	intron_retention	FALSE	canonical	3	310	junction_10	30.125771860278	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	-5	True	AATAAA	-20	NA	45767508	45696251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.7	chr14	-	3172	15	NNC	ENSMUSG00000037712.18	novel	3293	15	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.8310051629089	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTCTTTTGTACTTC	NA	False	NA	-7	True	AATAAA	-18	NA	45767463	45696253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45697481_45699223_45699366_45699572_45699698_45702187_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ES.10580.9	chr14	-	3328	15	NNC	ENSMUSG00000037712.18	novel	3293	15	NA	NA	-120	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	99.4473504433581	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTCTTTTGTACTTC	NA	False	NA	-7	True	AATAAA	-18	NA	45767695	45696253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713567_45719967_45720024_45741953_45742188_45766881_45767049_45767390
ES.10581.1	chr14	+	2958	2	NNC	ENSMUSG00000115324.2	novel	721	5	NA	NA	-17	-7165	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAAAAAGACCCAATTCA	NA	False	NA	NA	False	NA	NA	NA	45767797	45775179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_45769166_45773589
ES.10582.1	chr14	-	310	1	Intergenic	novelGene_8875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACATCTGAGCCAACAG	NA	False	NA	NA	False	NA	NA	NA	45774878	45774568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45774600_45774900
ES.10582.2	chr14	-	176	1	Intergenic	novelGene_8876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTGGC	NA	False	NA	NA	False	NA	NA	NA	45774878	45774702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45774700_45774900
ES.10583.1	chr14	-	2252	4	Fusion	ENSMUSG00000115702.2_ENSMUSG00000115391.2	novel	1035	2	NA	NA	231	-20	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTGCAGCAGACTGTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	45795399	45789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_45789705_45791234_45792542_45793198_45793475_45795120
ES.10584.1	chr14	-	174	1	Intergenic	novelGene_8877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45807114	45806940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45806900_45807100
ES.10585.1	chr14	-	5904	1	Genic_Genomic	ENSMUSG00000037697.20	novel	NA	NA	NA	NA	11066	2709	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGATGGGTTTAGTGGA	NA	False	NA	NA	False	NA	NA	NA	45829118	45823214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_45823200_45829100
ES.10586.1	chr14	-	5047	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	-11	4	intron_retention	TRUE	canonical	3	14	junction_1	39.0799572102575	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCTCTTGAGTCCT	NA	False	NA	1	True	ATTAAA	-24	NA	45895529	45830626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.10	chr14	-	3634	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-15	6183	-14	72	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTCCACTCTGTATG	NA	False	NA	NA	False	AAGAAA	-18	NA	45895614	45832106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.11	chr14	-	3679	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-108	6249	-26	3	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAATTATTTTTTTAA	NA	False	NA	63	True	ATTAAA	-21	NA	45895626	45832175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.12	chr14	-	3465	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	1	1546	0	2	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCAATTATTTTTTTA	NA	False	NA	62	True	ATTAAA	-20	NA	45895599	45832176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.13	chr14	-	3465	14	NNC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_6	40.5283157643915	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTCAATTATTTTTTTA	NA	False	NA	62	True	ATTAAA	-20	NA	45895594	45832176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45848129_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.14	chr14	-	3305	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	3	-1	intron_retention	FALSE	canonical	2	3	junction_11	42.3969825840402	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTCAATTATTTTT	NA	False	NA	59	True	ATTAAA	-17	NA	45895596	45832179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848148_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
ES.10586.15	chr14	-	3684	14	NNC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_12	35.7208109001034	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTCAATTATTTTT	NA	False	NA	59	True	ATTAAA	-17	NA	45895610	45832179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867011_45867211_45894678
ES.10586.16	chr14	-	3295	12	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_5	42.5526411956681	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTCAATTATTTTT	NA	False	NA	59	True	ATTAAA	-17	NA	45895585	45832179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.17	chr14	-	3359	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	12	-2	intron_retention	FALSE	canonical	2	3	junction_11	32.6810279332958	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895587	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
ES.10586.18	chr14	-	3600	14	NNC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_1	42.1177554654066	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895552	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45835776_45835879_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.19	chr14	-	3506	13	NNC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	-21	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	33.5865383086074	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895576	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45854002_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.2	chr14	-	5129	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-34	4707	-33	0	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895633	45830630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.20	chr14	-	2514	11	NIC	ENSMUSG00000037697.20	novel	5012	12	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	3	junction_10	42.981391322292	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45894826	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
ES.10586.22	chr14	-	3237	15	NIC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_12	42.5544668990369	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895168	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45866310_45866332_45867036_45867211_45894678
ES.10586.23	chr14	-	3594	13	NNC	ENSMUSG00000037697.20	novel	5012	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_11	47.430358304454	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTAGTTCAATTATTTT	NA	False	NA	58	True	ATTAAA	-16	NA	45895603	45832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45867735_45867865_45894678
ES.10586.24	chr14	-	3599	14	NNC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	-21	0	intron_retention	FALSE	canonical	3	3	junction_12	39.6766516529625	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACTAGTTCAATTATT	NA	False	NA	56	True	ATTAAA	-14	NA	45895576	45832182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45893994_45894074_45894678
ES.10586.25	chr14	-	3560	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_1	39.0799572102575	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACTAGTTCAATTATT	NA	False	NA	56	True	ATTAAA	-14	NA	45895598	45832182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.26	chr14	-	6867	13	NNC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	-4107	0	intron_retention	FALSE	non_canonical	0	0	junction_3	45.2130757881193	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACTAGTTCAATTATT	NA	False	NA	56	True	ATTAAA	-14	NA	45864754	45832182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840067_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45863551_45863616
ES.10586.27	chr14	-	3280	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	-15	-43	intron_retention	FALSE	canonical	3	14	junction_1	39.0799572102575	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATAATTTATAATCTCT	NA	False	NA	NA	False	AAAAAG	-19	NA	45895570	45832434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.28	chr14	-	2996	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-48	6854	-47	6	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTATGTTTCTGTCGT	NA	False	NA	1	True	TTTAAA	-34	NA	45895647	45832777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.29	chr14	-	2863	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	1	2148	0	5	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTATGTTTCTGTCG	NA	False	NA	0	True	TTTAAA	-33	NA	45895599	45832778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.3	chr14	-	3311	2	NIC	ENSMUSG00000037697.20	novel	5012	12	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895498	45830630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45894678
ES.10586.30	chr14	-	3046	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-80	6854	1	3	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTATTTATGTTTCTGT	NA	False	NA	-2	True	TTTAAA	-31	NA	45895598	45832780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.32	chr14	-	2746	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	32.6810279332958	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTTATTTATGTTTC	NA	False	NA	-5	True	TTTAAA	-28	NA	45895577	45832783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
ES.10586.33	chr14	-	3113	16	NNC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	82	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	50.0988356484792	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGAGTTATTTATGTTT	NA	False	NA	-6	True	TTTAAA	-27	NA	45895436	45832784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867011_45867211_45867735_45867865_45893994_45894074_45894678
ES.10586.34	chr14	-	2966	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.0799572102575	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGAGTTATTTATGTTT	NA	False	NA	-6	True	TTTAAA	-27	NA	45895606	45832784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.35	chr14	-	2628	1	Antisense	novelGene_ENSMUSG00000085913.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACATATCCTCATGT	NA	False	NA	NA	False	NA	NA	NA	45836137	45833509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_45833500_45836100
ES.10586.36	chr14	-	3322	2	ISM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	-35	34215	-35	1018	5prime_fragment	FALSE	canonical	3	117	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	45895635	45864845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_45867211_45894678
ES.10586.37	chr14	-	5892	1	FSM	ENSMUSG00000037697.20	ENSMUST00000226559.2	2671	1	-921	-2300	-921	1014	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	45870741	45864849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45864800_45870700
ES.10586.38	chr14	-	2494	3	FSM	ENSMUSG00000093167.3_ENSMUSG00000037697.20	ENSMUST00000153547.3	1143	3	-339	-1012	0	1012	multi-exon	FALSE	canonical	1	2	junction_1	57.5	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAGAGAGAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	45895518	45864851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45866332_45867036_45867211_45894678
ES.10586.39	chr14	-	4347	1	Intergenic	novelGene_8878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTCTAGAATTTATTTC	NA	False	NA	NA	False	TATAAA	-19	NA	45894442	45890095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_45890100_45894400
ES.10586.4	chr14	-	4914	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	98	0	16	0	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895502	45830630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ES.10586.5	chr14	-	5120	14	NIC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_12	40.7780832188802	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895603	45830630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45866310_45866332_45867036_45867211_45894678
ES.10586.6	chr14	-	6309	11	ISM	ENSMUSG00000037697.20	ENSMUST00000129599.8	2802	12	40	-1547	40	-1	intron_retention	FALSE	canonical	3	102	junction_6	8.17557337438788	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGCTGAGTCTCTTGA	NA	False	NA	-4	True	ATTAAA	-19	NA	45860607	45830631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168
ES.10586.7	chr14	-	5193	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-79	4706	2	-2	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGCTGAGTCTCTTG	NA	False	NA	-5	True	ATTAAA	-18	NA	45895597	45830632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10586.8	chr14	-	4836	12	NIC	ENSMUSG00000037697.20	novel	9802	13	NA	NA	-4	-8	intron_retention	FALSE	canonical	2	3	junction_11	32.6810279332958	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTCCATGCTGAGT	NA	False	NA	-11	True	ATTAAA	-12	NA	45895522	45830638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45894678
ES.10586.9	chr14	-	4970	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	12	-131	intron_retention	FALSE	canonical	3	14	junction_1	39.0799572102575	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAATTTTGATGATTTA	NA	False	NA	NA	False	AATATA	-8	NA	45895587	45830761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ES.10587.1	chr14	+	173	1	Intergenic	novelGene_8879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGAACCTGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	45922657	45922830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_45922700_45922800
ES.10588.1	chr14	+	333	1	Genic_Genomic	ENSMUSG00000082475.3	novel	NA	NA	NA	NA	8943	88	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	45950935	45951268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_45950900_45951300
ES.10589.1	chr14	-	180	1	Intergenic	novelGene_8880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	46060868	46060688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_46060700_46060900
ES.1059.1	chr1	-	167	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	93447253	93447086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93447100_93447300
ES.10590.1	chr14	+	480	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	0	-37	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	46321484	46322420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_46321631_46322086
ES.10590.2	chr14	+	700	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	2	-43	intron_retention	TRUE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGCATAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	46321486	46322414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_46322034_46322261
ES.10590.3	chr14	+	728	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	2	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	False	NA	NA	False	AATAAA	-45	NA	46321486	46322442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_46321631_46321858
ES.10591.1	chr14	-	2023	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	43	-2	43	2	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTTTCTATCTTATTT	6408	False	NA	NA	False	AATAAA	-27	NA	46628083	46620974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
ES.10591.10	chr14	-	3742	1	NIC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	-2	185	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	6482	False	NA	NA	False	NA	NA	NA	46628009	46624267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_46624300_46628000
ES.10591.2	chr14	-	1709	4	NNC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	-866	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.4419672692682	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAAACTAAGACCTTT	8864	False	NA	NA	False	AATAAA	-16	NA	46625627	46620985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_46622170_46623171_46623499_46624612_46624738_46625554
ES.10591.3	chr14	-	2027	4	NNC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	-8619	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.2497987105808	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAAACTAAGACCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	46636745	46620985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_46622170_46623171_46623552_46624612_46624738_46636407
ES.10591.5	chr14	-	1829	4	NNC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	-8195	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	16.779617264871	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAAACTAAGACCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	46636321	46620985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_46622170_46623171_46623552_46624612_46624738_46636181
ES.10591.7	chr14	-	1841	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	61	162	-58	25	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAGACAGAAAAGAAAAA	6426	False	NA	NA	False	NA	NA	NA	46628065	46621138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
ES.10591.8	chr14	-	1604	4	NNC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	-8362	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.9133717900592	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAATGAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	46636488	46621147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_46622170_46623171_46623552_46624616_46624738_46636407
ES.10591.9	chr14	-	2580	4	NNC	ENSMUSG00000021835.16	novel	2064	4	NA	NA	33	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.6914697279198	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6398	False	NA	NA	False	NA	NA	NA	46628093	46621179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_46622170_46623171_46623902_46624210_46624738_46627760
ES.10592.1	chr14	+	173	1	Intergenic	novelGene_8881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46748108	46748281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_46748100_46748300
ES.10593.1	chr14	+	170	1	Intergenic	novelGene_8882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATCAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	46959182	46959352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_46959200_46959400
ES.10594.1	chr14	+	827	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-15	-63	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTGAGTCATGAATT	NA	False	NA	9	True	NA	NA	NA	46998027	47009063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.10	chr14	+	3756	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	21	2911	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTTCCAGAAAACACTG	NA	False	NA	NA	False	AATAAA	-24	NA	46998072	47012037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.11	chr14	+	1151	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	22	307	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCGTATCTAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	46998073	47009433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.12	chr14	+	4548	8	NNC	ENSMUSG00000037628.11	novel	917	8	NA	NA	23	2465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.3244948916853	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCAGGTTGGAGCATT	NA	False	NA	NA	False	NA	NA	NA	46998074	47011591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47008634_47008857
ES.10594.13	chr14	+	709	8	NNC	ENSMUSG00000037628.11	novel	917	8	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	93.4646064190142	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAGTTCTCCAGCATA	NA	False	NA	1	True	AATAAA	-16	NA	46998074	47008976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_46998106_46999984_47000087_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ES.10594.14	chr14	+	207	1	Intergenic	novelGene_8883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTTCCAGGATAAAAT	2473	False	NA	NA	False	NA	NA	NA	47003859	47004066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47003900_47004100
ES.10594.2	chr14	+	3182	7	FSM	ENSMUSG00000037628.11	ENSMUST00000226621.2	634	7	-11	-2537	-2	2388	multi-exon	FALSE	canonical	3	26	junction_1	78.2254576351089	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGGCTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	46998040	47011514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.3	chr14	+	1896	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	-1	1020	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCTGTCCACTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	46998041	47010146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.4	chr14	+	355	4	ISM	ENSMUSG00000037628.11	ENSMUST00000227149.2	1952	5	32	3700	1	-3700	5prime_fragment	FALSE	canonical	3	194	junction_1	32.2628096868343	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCTCGAATGTGAAGAG	NA	False	NA	NA	False	AATAAA	-20	NA	46998043	47002606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452
ES.10594.5	chr14	+	4561	1	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	2	-3701	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCTCGAATGTGAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	46998044	47002605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998000_47002600
ES.10594.6	chr14	+	1091	7	FSM	ENSMUSG00000037628.11	ENSMUST00000226621.2	634	7	1	-458	1	309	multi-exon	FALSE	canonical	3	26	junction_1	78.2254576351089	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCGTATCTAACTTTAATG	NA	False	NA	NA	False	NA	NA	NA	46998052	47009435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_46998106_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10594.7	chr14	+	1590	8	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	9	733	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTTGCCAGCTTCTA	NA	False	NA	NA	False	NA	NA	NA	46998060	47009859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ES.10595.1	chr14	+	679	1	FSM	ENSMUSG00000115003.2	ENSMUST00000226700.2	898	1	218	1	218	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTAGTCTTGTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	47025307	47025986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47025300_47026000
ES.10596.1	chr14	+	182	1	Intergenic	novelGene_8884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAAAAATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	47028748	47028930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47028700_47028900
ES.10597.1	chr14	-	1517	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	17	4	17	-4	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATTACATTGTCTAT	NA	False	NA	NA	False	AATAAA	-27	NA	47025851	47013027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ES.10597.10	chr14	-	4680	6	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_3	231.362572599805	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059677	47045605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052446_47053054_47053685_47054842_47054940_47059557
ES.10597.11	chr14	-	3875	3	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	284	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059679	47045605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47059553
ES.10597.18	chr14	-	4171	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	270.945105141244	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	-5	True	AATAAA	-15	NA	47059699	47045608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052430_47053041_47053106_47053630_47053685_47054842_47054940_47059557
ES.10597.19	chr14	-	4013	5	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	22	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	235.594991457798	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	-5	True	AATAAA	-15	NA	47059677	47045608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47053634_47053685_47054842_47054940_47059557
ES.10597.2	chr14	-	1415	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	18	105	18	-105	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTTTGCTGTGCATT	NA	False	NA	NA	False	AATAAA	-12	NA	47025850	47013128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ES.10597.22	chr14	-	4021	6	FSM	ENSMUSG00000062014.14	ENSMUST00000226937.2	761	6	-8	-3252	-8	-3	multi-exon	FALSE	canonical	0	0	junction_3	274.359326431598	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	-5	True	AATAAA	-15	NA	47059649	47045608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47059557
ES.10597.23	chr14	-	6972	3	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	546	junction_2	11	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	-5	True	AATAAA	-15	NA	47059618	47045608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47054940_47059557
ES.10597.24	chr14	-	4550	1	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	3438	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTAGTGTTTTATTT	NA	False	NA	-5	True	AATAAA	-15	NA	47050158	47045608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47045600_47050200
ES.10597.29	chr14	-	4472	9	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	56	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	270.198538115957	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTCTAGTGTTTTA	NA	False	NA	-8	True	AATAAA	-12	NA	47059557	47045611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47055872_47056033_47056918_47057030_47059379
ES.10597.3	chr14	-	5330	4	ISM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	105	105	28	-105	intron_retention	FALSE	canonical	3	517	junction_2	12.657891697365	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTTTGCTGTGCATT	NA	False	NA	NA	False	AATAAA	-12	NA	47025763	47013128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568
ES.10597.30	chr14	-	3979	5	NIC	ENSMUSG00000062014.14	novel	761	6	NA	NA	-19	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	303.90901187691	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTCTAGTGTTTTA	NA	False	NA	-8	True	AATAAA	-12	NA	47059660	47045611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47059557
ES.10597.32	chr14	-	4326	8	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.835072393177	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTCTAGTGTTTTA	NA	False	NA	-8	True	AATAAA	-12	NA	47059700	47045611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47055872_47056033_47059557
ES.10597.35	chr14	-	3983	4	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	262.725881650227	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTCTAGTGTTTTA	NA	False	NA	-8	True	AATAAA	-12	NA	47059700	47045611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47054842_47054940_47059557
ES.10597.37	chr14	-	4408	8	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	271.960006063317	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACTTCTAGTGTTT	NA	False	NA	-10	True	AATAAA	-10	NA	47059646	47045613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052446_47053054_47053106_47053634_47053685_47054842_47054940_47056918_47057215_47059557
ES.10597.39	chr14	-	4166	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	1003	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	261.05661369817	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACTTCTAGTGTTT	NA	False	NA	-10	True	AATAAA	-10	NA	47058610	47045613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47058465
ES.10597.4	chr14	-	3651	4	NIC	ENSMUSG00000015759.12	novel	1538	5	NA	NA	44	-105	intron_retention	FALSE	canonical	3	505	junction_3	18.1169043222683	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTTTGCTGTGCATT	NA	False	NA	NA	False	AATAAA	-12	NA	47025747	47013128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47016490_47017569_47017683_47021568_47021638_47025639
ES.10597.40	chr14	-	4366	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-221	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.409074918045	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACTTCTAGTGTTT	NA	False	NA	-10	True	AATAAA	-10	NA	47059920	47045613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049267_47051704_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.41	chr14	-	3144	5	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	12	-882	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	235.594991457798	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGTGTTAGCATTT	NA	False	NA	NA	False	TATAAA	-13	NA	47059687	47046487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47053634_47053685_47054842_47054940_47059557
ES.10597.42	chr14	-	3287	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	-885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.21091447478	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAATATGTGTTAGCA	NA	False	NA	NA	False	TATAAA	-10	NA	47059699	47046490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052446_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.43	chr14	-	2950	3	NNC	ENSMUSG00000062014.14	novel	280	3	NA	NA	2	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	284	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAATATGTGTTAGCA	NA	False	NA	NA	False	TATAAA	-10	NA	47059639	47046490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47059553
ES.10597.44	chr14	-	3151	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	27	993	27	-993	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGGAGTTTACTGGAT	NA	False	NA	NA	False	NA	NA	NA	47059672	47046598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.47	chr14	-	654	7	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-26	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.21091447478	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAATTCTTCATTTG	NA	False	NA	36	True	NA	NA	NA	47059667	47049092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052446_47053054_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.48	chr14	-	1132	6	NNC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	-12	1	intron_retention	FALSE	non_canonical	0	0	junction_3	231.362572599805	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCACTGTTACTTAC	NA	False	NA	-1	True	CATAAA	-16	NA	47059653	47049129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47049281_47051700_47051775_47052361_47052446_47053054_47053685_47054842_47054940_47059557
ES.10597.5	chr14	-	1672	10	Fusion	ENSMUSG00000062014.14_ENSMUSG00000015759.12	novel	610	7	NA	NA	26	-107	multi-exon	FALSE	canonical	0	0	junction_4	227.6775389194	600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGCTTTGCTGTGCA	NA	False	NA	NA	False	AATAAA	-10	NA	47059673	47013130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.6	chr14	-	785	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	46	707	-31	13	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGGTTGAACTTGCAC	NA	False	NA	NA	False	TATAAA	-27	NA	47025822	47013730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ES.10597.7	chr14	-	7539	1	Genic_Genomic	ENSMUSG00000015759.12	novel	NA	NA	NA	NA	-5755	-10341	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGCAATTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	47031623	47024084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_47024100_47031600
ES.10597.8	chr14	-	4183	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	-11	-1	-11	1	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTTTTATTTTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	47059710	47045604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ES.10597.9	chr14	-	4097	6	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	287.74321886015	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059675	47045605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47054842_47054940_47059557
ES.10598.1	chr14	+	417	2	FSM	ENSMUSG00000055128.16	ENSMUST00000140114.3	419	2	0	2	0	-2	multi-exon	FALSE	canonical	3	59	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGTAGACGTGAAGAT	631	False	NA	NA	False	ATTAAA	-21	NA	47069675	47077869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47069837_47077613
ES.10598.2	chr14	+	1208	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	120	-4	1	4	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTGTCTTTGTCGATA	657	False	NA	18	True	AATAAA	-28	NA	47069701	47091654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ES.10599.1	chr14	+	178	1	Intergenic	novelGene_8885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	47142356	47142534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47142400_47142500
ES.106.1	chr1	+	177	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTTTTTTGTT	8264	False	NA	NA	False	NA	NA	NA	13078161	13078338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13078200_13078300
ES.1060.1	chr1	-	176	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93451913	93451737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93451700_93451900
ES.10600.1	chr14	+	161	1	Intergenic	novelGene_8886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	47260412	47260573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47260400_47260600
ES.10601.1	chr14	+	174	1	Intergenic	novelGene_8887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGAGTGAGCGGGGTT	812	False	NA	NA	False	NA	NA	NA	47368594	47368768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47368600_47368800
ES.10602.1	chr14	-	2717	5	NIC	ENSMUSG00000037580.11	novel	2775	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.1350367722943	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGGATGTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	47426868	47391351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47393382_47394865_47394951_47396319_47396352_47406668_47406779_47426408
ES.10602.2	chr14	-	2772	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	2	1	2	-1	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGTGGATGTTGTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	47426868	47391352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ES.10602.3	chr14	-	1076	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	-36	1735	-36	-1735	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGAGCTTCCGCTTTC	NA	False	NA	-3	True	AATAAA	-12	NA	47426906	47393086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ES.10603.1	chr14	+	160	1	Intergenic	novelGene_8888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAATGGGTAA	8526	False	NA	NA	False	NA	NA	NA	47430403	47430563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47430400_47430600
ES.10604.1	chr14	+	175	1	Intergenic	novelGene_8889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTTTTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	47447921	47448096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47447900_47448100
ES.10605.1	chr14	+	286	1	Intergenic	novelGene_8890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAATAAACAATCAAA	NA	False	NA	NA	False	NA	NA	NA	47463921	47464207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47463900_47464200
ES.10606.1	chr14	+	2952	4	Antisense	novelGene_ENSMUSG00000084648.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAAGAAAAGGAAGG	NA	False	NA	NA	False	AATAAA	-45	NA	47508362	47512833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_47509689_47510323_47510378_47510571_47510682_47511371
ES.10606.2	chr14	+	3205	3	Antisense	novelGene_ENSMUSG00000037572.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	AATAAA	-19	NA	47508849	47512807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_47509831_47509894_47510681_47511369
ES.10607.1	chr14	+	6890	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	-13	0	-13	0	multi-exon	FALSE	canonical	3	35	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCGTTTTTAAAGAT	NA	False	NA	NA	False	AATAAA	-28	NA	47514374	47533559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.2	chr14	+	1812	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	4	5061	4	1005	multi-exon	FALSE	canonical	3	35	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCAGATCAATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	47514391	47528498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.3	chr14	+	2088	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	9	4780	9	1286	multi-exon	FALSE	canonical	3	35	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCATTATAATGTAATTG	NA	False	NA	NA	False	AGTAAA	-14	NA	47514396	47528779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.4	chr14	+	2564	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	19	4294	19	1772	multi-exon	FALSE	canonical	3	35	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCTCAATATTTAGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	47514406	47529265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.5	chr14	+	2314	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	22	4541	22	1525	multi-exon	FALSE	canonical	3	35	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGCTCCTTTCTTAC	NA	False	NA	NA	False	AATAAA	-27	NA	47514409	47529018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.6	chr14	+	4528	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	40	2309	40	-2309	multi-exon	FALSE	canonical	3	35	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGACTTGGGAAGAGAA	NA	False	NA	9	True	AATAAA	-25	NA	47514427	47531250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47514679_47526973
ES.10607.7	chr14	+	2215	1	Intergenic	novelGene_8891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGAGGGGGAGTTTCT	4837	False	NA	NA	False	NA	NA	NA	47520148	47522363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47520100_47522400
ES.10608.1	chr14	+	4654	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-30	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCATGTGACCTGCAT	9597	False	NA	17	True	AATAAA	-22	NA	47535692	47560667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
ES.10608.12	chr14	+	3047	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	4	-1454	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	99.1548662446781	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGGATAGTTTTTGTG	9634	False	NA	NA	False	AATAAA	-15	NA	47535729	47559098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557358_47557394
ES.10608.13	chr14	+	3842	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	5	-659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGTGTGTGTGTATAT	9635	False	NA	NA	False	AATAAA	-1	NA	47535730	47559893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
ES.10608.15	chr14	+	4642	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.03108891324554	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTTTCTTTGTGTA	9635	False	NA	4	True	AAGAAA	-15	NA	47535730	47560549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47550941_47551083_47556868_47557354_47557391
ES.10608.16	chr14	+	4620	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	5	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTGCATGTGACCT	9635	False	NA	13	True	AATAAA	-18	NA	47535730	47560663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535867_47547842_47548571_47556868_47557368_47557406
ES.10608.17	chr14	+	6439	3	NNC	ENSMUSG00000021840.18	novel	840	2	NA	NA	6	2732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTTGCCAATCAATTAC	9636	False	NA	NA	False	NA	NA	NA	47535731	47554347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535867_47547842_47549008_47549208
ES.10608.18	chr14	+	3087	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	7	1448	7	-1448	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTTTTTGTGAAGTTG	9637	False	NA	NA	False	AATAAA	-21	NA	47535732	47559104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.2	chr14	+	4543	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-30	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.1548662446781	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTGTGTATTTTATT	9597	False	NA	11	True	AAGAAA	-22	NA	47535692	47560556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557354_47557389
ES.10608.20	chr14	+	12589	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.502283081222	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATGGTTTCTTTGTGT	9639	False	NA	3	True	AAGAAA	-14	NA	47535734	47560548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47549008_47549208_47557358_47557394
ES.10608.21	chr14	+	1162	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	9	3371	9	-3371	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATCTTAATTGACAACA	9639	False	NA	123	True	NA	NA	NA	47535734	47557181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.22	chr14	+	4644	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	9	-111	9	2	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTGCATGTGACCT	9639	False	NA	13	True	AATAAA	-18	NA	47535734	47560663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.23	chr14	+	4614	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	9640	False	NA	11	True	AATAAA	-16	NA	47535735	47560661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547839_47548571_47556868_47557362_47557398
ES.10608.24	chr14	+	4616	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	9640	False	NA	11	True	AATAAA	-16	NA	47535735	47560661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547836_47548571_47556868_47557354_47557391
ES.10608.25	chr14	+	4499	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATGGTTTCTTTGTGT	9645	False	NA	3	True	AAGAAA	-14	NA	47535740	47560548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547837_47548571_47556868_47557354_47557389
ES.10608.26	chr14	+	6399	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	16	2713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	103.240818800834	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAACAAAACAAAAC	9646	False	NA	NA	False	NA	NA	NA	47535741	47554328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47549008_47549208
ES.10608.27	chr14	+	4604	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	9646	False	NA	11	True	AATAAA	-16	NA	47535741	47560661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47556868_47557354_47557389
ES.10608.28	chr14	+	1043	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	16	3483	16	-3483	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCAAGTGTGCTTAA	9646	False	NA	11	True	GATAAA	-11	NA	47535741	47557069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.29	chr14	+	4688	6	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.010188189626	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACCTGTTTGCATGTGA	9646	False	NA	10	True	AATAAA	-15	NA	47535741	47560660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47550941_47551032_47556868_47557354_47557389
ES.10608.3	chr14	+	4534	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTTTCTTTGTGTATT	9604	False	NA	6	True	AAGAAA	-17	NA	47535699	47560551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47556868_47557354_47557391
ES.10608.30	chr14	+	4579	6	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.010188189626	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTTTCTTTGTGTATT	9646	False	NA	6	True	AAGAAA	-17	NA	47535741	47560551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47550941_47551032_47556868_47557354_47557389
ES.10608.31	chr14	+	4324	6	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.93855457348	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCATGGTTTCTTTGT	9647	False	NA	1	True	AAGAAA	-12	NA	47535742	47560546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548391_47548549_47548571_47556868_47557354_47557389
ES.10608.32	chr14	+	2672	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	18	1852	18	-1852	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACTGAATAATTGGGAG	9648	False	NA	NA	False	ATTAAA	-20	NA	47535743	47558700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.33	chr14	+	4486	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	18	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCATGGTTTCTTTGT	9648	False	NA	1	True	AAGAAA	-12	NA	47535743	47560546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47556868_47557360_47557396
ES.10608.35	chr14	+	4593	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	20	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	99.1548662446781	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACCTGTTTGCATGTGA	9650	False	NA	10	True	AATAAA	-15	NA	47535745	47560660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557380_47557416
ES.10608.36	chr14	+	1159	4	NIC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	20	-353	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	99.9410937613864	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATAGTGTAATGTTG	9650	False	NA	NA	False	NA	NA	NA	47535745	47551262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47535863_47546023_47546046_47547871_47548571_47550941
ES.10608.37	chr14	+	4478	5	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	24	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	99.1548662446781	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTTTCTTTGTGTA	9654	False	NA	4	True	AAGAAA	-15	NA	47535749	47560549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868_47557368_47557404
ES.10608.38	chr14	+	3394	4	NIC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	26	1888	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	99.9410937613864	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAACCCTGTCCCTCC	9656	False	NA	NA	False	ATTAAA	-15	NA	47535751	47553503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47535863_47546023_47546046_47547871_47548571_47550941
ES.10608.4	chr14	+	4571	3	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTCTTTGTGTATTTT	9605	False	NA	8	True	AAGAAA	-19	NA	47535700	47560553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547846_47548571_47556868
ES.10608.40	chr14	+	7219	2	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	26	3337	intron_retention	FALSE	canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTGTGGCTGTTTC	9656	False	NA	NA	False	NA	NA	NA	47535751	47554952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844
ES.10608.41	chr14	+	3830	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	27	-659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.494107593803	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGTGTGTGTGTATAT	9657	False	NA	NA	False	AATAAA	-1	NA	47535752	47559893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547839_47548571_47556868_47557354_47557389
ES.10608.42	chr14	+	4465	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	37	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	115.494107593803	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCATGGTTTCTTTGT	9667	False	NA	1	True	AAGAAA	-12	NA	47535762	47560546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47556868_47557380_47557418
ES.10608.44	chr14	+	3282	4	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	74	-346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	103.240818800834	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTAATGTTGTTCTGCC	9704	False	NA	NA	False	NA	NA	NA	47535799	47551269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47546023_47546046_47547871_47549008_47549208
ES.10608.45	chr14	+	3925	4	NIC	ENSMUSG00000021840.18	novel	4531	3	NA	NA	-24	-666	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	109.685408732834	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAACTGGTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	47536203	47559886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47536390_47546023_47546046_47547871_47548571_47556868
ES.10608.46	chr14	+	4402	3	FSM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	16	113	16	-4	multi-exon	FALSE	canonical	3	218	junction_1	13.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATGGTTTCTTTGTGT	NA	False	NA	3	True	AAGAAA	-14	NA	47546022	47560548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47546046_47547871_47548571_47556868
ES.10608.47	chr14	+	7738	2	NNC	ENSMUSG00000021840.18	novel	840	2	NA	NA	402	2732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTTGCCAATCAATTAC	NA	False	NA	NA	False	NA	NA	NA	47546408	47554347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47549008_47549208
ES.10608.49	chr14	+	4931	1	NIC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	3668	-3549	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTTCATGTGTTTG	NA	False	NA	-55	True	NA	NA	NA	47552072	47557003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47552100_47557000
ES.10608.5	chr14	+	3280	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	-6	1268	-3	-1268	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCTGGTAAGATACT	9624	False	NA	NA	False	NA	NA	NA	47535719	47559284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.50	chr14	+	6874	2	NNC	ENSMUSG00000021840.18	novel	4531	3	NA	NA	5235	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTTTCTTTGTGTA	NA	False	NA	4	True	AAGAAA	-15	NA	47553639	47560549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47557354_47557389
ES.10608.6	chr14	+	4663	3	NNC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTGCATGTGACCT	9625	False	NA	13	True	AATAAA	-18	NA	47535720	47560663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47535863_47547844_47548571_47556868
ES.10608.7	chr14	+	4545	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	-3	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	9627	False	NA	7	True	AAGAAA	-18	NA	47535722	47560552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ES.10608.8	chr14	+	4870	4	NIC	ENSMUSG00000021840.18	novel	4542	4	NA	NA	-1	3337	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	99.9410937613864	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTGTGGCTGTTTC	9629	False	NA	NA	False	NA	NA	NA	47535724	47554952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47535863_47546023_47546046_47547871_47548571_47550941
ES.10609.1	chr14	-	4639	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	-377	-2	-352	2	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTGCTATGGTTTTA	NA	False	NA	2	True	AATAAA	-22	NA	47514666	47478398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.10	chr14	-	5760	26	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_20	104.48196016538	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514290	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47507890_47508050_47508252_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.11	chr14	-	4313	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	81.9528573835796	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514316	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493744_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.12	chr14	-	4205	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_24	89.7974572765473	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514285	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47514028
ES.10609.13	chr14	-	4206	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_24	87.1525542272476	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514322	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47514064
ES.10609.14	chr14	-	4613	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	3	-1	intron_retention	FALSE	canonical	1	12	junction_19	88.9334567090598	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514286	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509235_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.15	chr14	-	6252	23	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	2	-1	intron_retention	FALSE	canonical	1	98	junction_11	70.8477736050568	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514262	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.17	chr14	-	4416	26	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_5	103.036117939293	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514293	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47483481_47483635_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.21	chr14	-	4262	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_7	88.6477012141632	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514298	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485350_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.23	chr14	-	3660	18	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	6229	-1	combination_of_known_junctions	FALSE	canonical	1	16	junction_9	97.7352188843951	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47508035	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591
ES.10609.24	chr14	-	4070	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_13	91.5904420435015	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514285	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.26	chr14	-	4242	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	114.829697269478	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514292	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495978_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511524_47512200_47512292_47513977
ES.10609.27	chr14	-	4255	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_19	90.490292603989	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514278	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509585_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.28	chr14	-	4132	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_17	92.2752519216408	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514269	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.29	chr14	-	6140	24	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_18	91.2635519625672	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514291	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47508050_47508252_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.3	chr14	-	4172	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	2	0	2	0	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514312	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.30	chr14	-	6318	24	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-3	-1	intron_retention	TRUE	non_canonical	0	0	junction_18	91.229037263777	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514267	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47508051_47508252_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.31	chr14	-	4229	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_11	81.9528573835796	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514286	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493691_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.34	chr14	-	4211	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	106.761774005909	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTCTTGCTATGGTT	NA	False	NA	-1	True	AATAAA	-19	NA	47514293	47478401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501067_47503130_47503278_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.35	chr14	-	7193	22	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	98	junction_9	69.9226329822798	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTCTTGCTATGGT	NA	False	NA	-2	True	AATAAA	-18	NA	47514272	47478402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482915_47483289_47483334_47484837_47484892_47485242_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.36	chr14	-	4422	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	10	-2	intron_retention	FALSE	canonical	1	98	junction_10	69.0560168222674	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTCTTGCTATGGT	NA	False	NA	-2	True	AATAAA	-18	NA	47514279	47478402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.37	chr14	-	4286	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_16	90.5746699322351	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTCTTGCTATGGT	NA	False	NA	-2	True	AATAAA	-18	NA	47514311	47478402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504620_47505511_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.38	chr14	-	4809	23	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	98	junction_9	69.315320358227	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTCTTGCTATGGT	NA	False	NA	-2	True	AATAAA	-18	NA	47514291	47478402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.39	chr14	-	4044	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_7	90.0275110231356	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTTGTCTTGCTATGG	NA	False	NA	-3	True	AATAAA	-17	NA	47514294	47478403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.4	chr14	-	7343	22	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	12	0	intron_retention	FALSE	canonical	1	98	junction_8	70.5020222929264	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514277	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47483334_47484837_47484892_47485242_47485356_47485452_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.41	chr14	-	5407	10	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-3507	-3	intron_retention	FALSE	canonical	1	1	junction_9	119.286562322071	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTTGTCTTGCTATGG	NA	False	NA	-3	True	AATAAA	-17	NA	47497225	47478403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47496116_47496902
ES.10609.43	chr14	-	4106	11	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	4	-4	intron_retention	TRUE	non_canonical	0	0	junction_5	107.132628083138	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATTTGTCTTGCTATG	NA	False	NA	-4	True	AATAAA	-16	NA	47514285	47478404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47483334_47484837_47484892_47485242_47486385_47509409_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.44	chr14	-	4067	24	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	12	-9	intron_retention	FALSE	non_canonical	0	0	junction_10	99.3631517053691	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGCATATTTGTCTTG	NA	False	NA	-9	True	AATAAA	-11	NA	47514277	47478409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495978_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.45	chr14	-	3519	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	2	653	2	-65	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAAGTAGTGAGACCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	47514312	47479053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.46	chr14	-	3223	2	ISM	ENSMUSG00000037572.18	ENSMUST00000228810.2	706	3	-2107	1580	-2107	-1580	5prime_fragment	FALSE	canonical	3	309	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47484834	47480568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47481399_47482441
ES.10609.47	chr14	-	2584	5	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	-3427	-1587	intron_retention	FALSE	canonical	3	309	junction_1	37.5399786893919	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47486154	47480575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47481399_47482441_47483334_47484837_47484892_47485242_47485356_47485452
ES.10609.48	chr14	-	2156	14	FSM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	20	786	-5	-786	multi-exon	FALSE	canonical	3	222	junction_2	24.3235099460311	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGTCTTCATTGATTT	NA	False	NA	NA	False	AATAAA	-12	NA	47514269	47495921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.49	chr14	-	4093	13	ISM	ENSMUSG00000037572.18	ENSMUST00000111790.2	2962	14	-3	1553	-3	-1553	5prime_fragment	FALSE	canonical	3	222	junction_1	23.4763474350012	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTCAGAGTGTTCAACCA	NA	False	NA	NA	False	NA	NA	NA	47514292	47496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.5	chr14	-	3800	7	ISM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	26652	0	-4910	0	intron_retention	FALSE	canonical	3	309	junction_2	30.8094502096714	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47487637	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242
ES.10609.6	chr14	-	4321	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_24	90.5746699322351	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514284	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512379_47513977
ES.10609.7	chr14	-	3875	23	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	93.4664389319052	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514312	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510635_47514075
ES.10609.8	chr14	-	4073	24	NIC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	92.3183650705566	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514287	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.10609.9	chr14	-	4226	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_13	89.7273261362198	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514279	47478400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499015_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ES.1061.1	chr1	-	3153	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	103	993	10	-993	multi-exon	TRUE	canonical	3	133	junction_7	20.1461601451751	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGTAAACATTACTTG	NA	False	NA	NA	False	AAAACA	-2	NA	93563341	93548465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.10	chr1	-	2697	10	ISM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	281	6	131	-6	3prime_fragment	FALSE	canonical	3	161	junction_5	14.9451672687648	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCTGATGTACAGAG	NA	False	NA	-42	True	AATAAA	-13	NA	93563070	93549629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019
ES.1061.11	chr1	-	2719	10	NIC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	133	junction_5	21.9898966699609	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCTGATGTACAGAG	NA	False	NA	-42	True	AATAAA	-13	NA	93563350	93549629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93550249_93551117_93551255_93552274_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.12	chr1	-	2039	12	NNC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	-34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.7946809116234	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCTGATGTACAGAG	NA	False	NA	-42	True	AATAAA	-13	NA	93563385	93549629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93550249_93551117_93551255_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553905_93554746_93554856_93555375_93555431_93555984_93556091_93556755_93556987_93563019_93563106_93563268
ES.1061.13	chr1	-	2073	12	NNC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	53.4045839491036	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCTGATGTACAGA	NA	False	NA	-43	True	AATAAA	-12	NA	93563387	93549630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553368_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.15	chr1	-	1939	12	NNC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	54.0660752770882	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTTCTGATGTACAG	NA	False	NA	-44	True	AATAAA	-11	NA	93563478	93549631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563453
ES.1061.16	chr1	-	1543	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	102	2604	9	4	multi-exon	FALSE	canonical	3	133	junction_7	20.1461601451751	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCAGGTTACCTTCTT	NA	False	NA	NA	False	NA	NA	NA	93563342	93550076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.17	chr1	-	734	5	ISM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	1	4954	1	798	5prime_fragment	FALSE	canonical	3	169	junction_1	12.1037184369102	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAATGGCCACACTGA	NA	False	NA	NA	False	NA	NA	NA	93563350	93554577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.2	chr1	-	4929	1	NIC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	48	-1061	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCAGAAGTCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	93553462	93548533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93548500_93553500
ES.1061.3	chr1	-	2167	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	-33	2115	-33	36	multi-exon	FALSE	canonical	3	133	junction_7	20.1461601451751	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTGAGCTATTGTCAT	NA	False	NA	0	True	NA	NA	NA	93563477	93549587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.4	chr1	-	1895	11	NIC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	3	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	56.028564143658	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCCTGGCCAGACAGG	NA	False	NA	-28	True	AATAAA	-27	NA	93563348	93549615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93550249_93551117_93551255_93552274_93552347_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.5	chr1	-	3382	9	NIC	ENSMUSG00000026277.15	novel	2821	11	NA	NA	18	0	intron_retention	FALSE	canonical	3	169	junction_5	13.4018422241123	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563426	93549623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.7	chr1	-	3028	10	NIC	ENSMUSG00000026277.15	novel	2821	11	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	169	junction_6	13.6137185711081	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGATGTACAGAGCCT	NA	False	NA	-39	True	AATAAA	-16	NA	93563387	93549626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.8	chr1	-	4853	6	NIC	ENSMUSG00000026277.15	novel	2821	11	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	169	junction_2	12.3773987574126	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGATGTACAGAGCCT	NA	False	NA	-39	True	AATAAA	-16	NA	93563387	93549626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93550249_93551117_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ES.1061.9	chr1	-	2086	6	NNC	ENSMUSG00000026277.15	novel	2821	11	NA	NA	-824	-6	intron_retention	FALSE	canonical	0	0	junction_3	95.2189056857933	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCTGATGTACAGAG	NA	False	NA	-42	True	AATAAA	-13	NA	93554334	93549629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552652_93552871_93553182_93553661_93553772
ES.10610.1	chr14	-	3857	3	Genic_Genomic	ENSMUSG00000114977.2	novel	1035	1	NA	NA	145	10798	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAGTGGTTTAATTTA	NA	False	NA	NA	False	NA	NA	NA	47535854	47524166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_47527952_47534349_47534390_47535822
ES.10611.1	chr14	-	284	1	Intergenic	novelGene_8892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47540085	47539801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47539800_47540100
ES.10612.1	chr14	-	3719	1	Antisense	novelGene_ENSMUSG00000021840.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCAAAATGCCATTTT	4971	False	NA	NA	False	NA	NA	NA	47563460	47559741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47559700_47563500
ES.10612.2	chr14	-	172	1	Intergenic	novelGene_8893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAGGAAACA	6973	False	NA	NA	False	NA	NA	NA	47561458	47561286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47561300_47561500
ES.10613.1	chr14	+	886	1	Intergenic	novelGene_8894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTGTCTCAGGA	NA	False	NA	NA	False	NA	NA	NA	47564680	47565566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47564700_47565600
ES.10614.1	chr14	-	390	4	Intergenic	novelGene_8895	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47602589	47594639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47594780_47600014_47600062_47601149_47601315_47602551
ES.10615.1	chr14	+	970	5	NNC	ENSMUSG00000050335.18	novel	646	5	NA	NA	-173	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	40.4907396820557	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611096	47623254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47611173_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ES.10615.2	chr14	+	982	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	24	292	-3	2	multi-exon	FALSE	canonical	3	42	junction_1	20.2286924935845	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCCATCGCTTTGGGGGT	NA	False	NA	3	True	AATAAA	-16	NA	47611369	47623253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ES.10615.3	chr14	+	951	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	105	363	2	3	multi-exon	FALSE	canonical	3	33	junction_1	23.7941169199447	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611374	47623254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ES.10615.4	chr14	+	956	5	NIC	ENSMUSG00000050335.18	novel	1298	6	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.4907396820557	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATCGCTTTGGGGGTT	NA	False	NA	4	True	AATAAA	-17	NA	47611374	47623254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47611437_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ES.10616.1	chr14	-	2006	1	Intergenic	novelGene_8896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	47614541	47612535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47612500_47614500
ES.10617.1	chr14	+	238	1	Intergenic	novelGene_8897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACGATACTAAAACTACA	NA	False	NA	NA	False	AAGAAA	-41	NA	47638340	47638578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47638300_47638600
ES.10618.1	chr14	-	5059	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	-50	-942	-20	3	multi-exon	FALSE	canonical	3	355	junction_10	53.3282508971558	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCGCATTGTTAATT	NA	False	NA	NA	False	NA	NA	NA	47655684	47625232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.10	chr14	-	2726	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	123.84410002544	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655655	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47648998_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.11	chr14	-	3754	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	355	junction_11	51.7367571608667	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655672	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.12	chr14	-	4706	18	NNC	ENSMUSG00000037544.15	novel	4067	17	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	124.828851691157	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655664	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625800_47626127_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.16	chr14	-	4825	17	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	355	junction_10	53.0506464970032	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655684	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.19	chr14	-	2719	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	102.855729242771	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655672	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.20	chr14	-	2759	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	123.980285171115	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655676	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645108_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.22	chr14	-	2344	16	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	38	-36	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	154.064777141161	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47653926	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47649115_47649201_47650434_47650498_47651102_47651297_47653792
ES.10618.23	chr14	-	2604	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-36	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	126.996171917349	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655672	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.24	chr14	-	2722	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-9	-36	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_8	121.800902609723	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655673	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637132_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.25	chr14	-	4478	16	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	2	-36	intron_retention	FALSE	canonical	0	0	junction_9	129.816691274017	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655655	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.26	chr14	-	6060	17	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	0	-36	intron_retention	FALSE	canonical	3	355	junction_10	52.2658095101377	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655664	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47628120_47629178_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.27	chr14	-	2719	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-20	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	123.331443929472	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655684	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654005_47655561
ES.10618.28	chr14	-	3938	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-1	-36	intron_retention	FALSE	canonical	3	355	junction_11	55.2976219164927	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47655665	47625280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.3	chr14	-	2683	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	64	junction_9	138.956989686374	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655672	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.33	chr14	-	2715	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-33	-37	combination_of_known_junctions	FALSE	canonical	3	64	junction_10	111.61232785134	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655697	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.34	chr14	-	5271	5	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-1902	-37	intron_retention	FALSE	canonical	3	484	junction_1	35.1452343853331	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47635320	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47631775_47633211
ES.10618.35	chr14	-	2647	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	31	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	124.678760059108	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655603	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637119_47638968_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.36	chr14	-	2677	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	3	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	124.599915284437	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655631	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643870_47645095_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.38	chr14	-	4714	2	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	24581	46	427	-37	intron_retention	FALSE	canonical	3	484	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47631283	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47625581_47626868
ES.10618.39	chr14	-	2731	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	55	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	123.331443929472	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655579	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655467
ES.10618.4	chr14	-	2782	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	123.927908653418	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655672	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633444_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.40	chr14	-	2770	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-9	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.163828422422	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655673	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635632_47635727_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.41	chr14	-	2629	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-2	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.27400282351	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47655666	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628029_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.42	chr14	-	2027	14	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-17	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	161.160436802996	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACCAAAATAAATAAA	99	False	NA	NA	False	NA	NA	NA	47649140	47625281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633444_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115
ES.10618.44	chr14	-	4051	17	NIC	ENSMUSG00000037544.15	novel	4067	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	64	junction_8	114.705448186867	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAATACAAGCCG	NA	False	NA	NA	False	AATAAA	-8	NA	47655655	47626175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.45	chr14	-	2432	18	ISM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	232	1588	2	471	5prime_fragment	FALSE	canonical	3	355	junction_11	56.3759010086125	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTTGAGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	47655632	47626823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.46	chr14	-	3328	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	-50	789	-20	331	multi-exon	FALSE	canonical	3	355	junction_10	53.3282508971558	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGATCAAAACAATGTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	47655684	47626963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.47	chr14	-	2945	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	2	1120	2	0	multi-exon	FALSE	canonical	3	355	junction_10	53.3282508971558	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGTCATTTAATGTCTT	NA	False	NA	NA	False	AATGAA	-13	NA	47655632	47627294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.48	chr14	-	1270	8	ISM	ENSMUSG00000037544.15	ENSMUST00000178661.8	4414	16	32	17643	2	-1988	5prime_fragment	FALSE	canonical	3	355	junction_1	66.2715502108328	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACAATTGTTGAGAAA	NA	False	NA	NA	False	AGTAAA	-19	NA	47655632	47644937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.5	chr14	-	3679	20	Fusion	ENSMUSG00000115436.2_ENSMUSG00000037544.15	novel	2964	19	NA	NA	244	-2	multi-exon	FALSE	canonical	0	0	junction_19	156.379767166176	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47657402	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_47625577_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565_47656075_47656891
ES.10618.6	chr14	-	5404	17	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	2	-2	intron_retention	FALSE	canonical	3	19	junction_1	127.2184237591	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655655	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625577_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.7	chr14	-	2735	15	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	176.255279266715	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655684	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628538_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47653792_47654029_47655565
ES.10618.8	chr14	-	3049	19	NNC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	123.786766579659	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655649	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631291_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10618.9	chr14	-	3823	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	355	junction_11	56.2468607351606	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTCTTCGCATTGT	NA	False	NA	NA	False	NA	NA	NA	47655666	47625237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_47625581_47626868_47626916_47627899_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ES.10619.1	chr14	-	172	1	Intergenic	novelGene_8898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTATCT	NA	False	NA	NA	False	NA	NA	NA	47691532	47691360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47691400_47691500
ES.1062.1	chr1	+	219	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGAAATGAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	93567376	93567595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93567400_93567600
ES.10620.1	chr14	-	186	1	Intergenic	novelGene_8899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTGT	NA	False	NA	NA	False	NA	NA	NA	47691918	47691732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47691700_47691900
ES.10621.1	chr14	+	3112	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-115	-4	-57	0	multi-exon	FALSE	canonical	3	71	junction_1	10.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47709960	47769419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47710175_47763661_47763772_47766631
ES.10621.10	chr14	+	3397	5	NNC	ENSMUSG00000037536.15	novel	3132	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.3886376418857	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	False	NA	7	True	AATAAA	-15	NA	47709995	47769412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738328_47740311_47740562_47763661_47763772_47766631
ES.10621.11	chr14	+	3315	5	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	-22	14	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	35.4436171968946	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTTACTAACTTTAT	NA	False	NA	28	True	AATAAA	-36	NA	47709995	47769433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47763661_47763772_47766631
ES.10621.12	chr14	+	3721	9	NNC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	-5	-430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.9254502709046	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAACTCTTGCCTGTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	47710012	47768927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744073_47744196_47744721_47744904_47746513_47746687_47753051_47753504_47763661_47763772_47766631
ES.10621.13	chr14	+	3634	7	NNC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.9698282650757	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710017	47769415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738332_47742442_47742590_47744721_47744904_47746513_47746687_47763661_47763772_47766631
ES.10621.14	chr14	+	3579	7	NNC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.5480583972042	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710017	47769415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744073_47744196_47744721_47744904_47763661_47763772_47766631
ES.10621.15	chr14	+	3364	5	NNC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.4374044340273	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGATTTTACTAACT	NA	False	NA	24	True	AATAAA	-32	NA	47710018	47769429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738332_47742442_47742590_47744721_47744904_47766631
ES.10621.16	chr14	+	3458	6	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	33.4269352468933	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCTGGTCTTAAAATAAG	NA	False	NA	12	True	AATAAA	-20	NA	47710018	47769417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47763661_47763772_47766631
ES.10621.18	chr14	+	3015	3	FSM	ENSMUSG00000037536.15	ENSMUST00000227162.2	373	3	-25	-2617	3	0	multi-exon	FALSE	canonical	3	11	junction_2	19	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710020	47769415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47710175_47738250_47738328_47766631
ES.10621.2	chr14	+	5958	2	ISM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	-108	3	-50	0	intron_retention	FALSE	canonical	3	71	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	False	NA	7	True	AATAAA	-15	NA	47709967	47769412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47710175_47763661
ES.10621.20	chr14	+	3541	1	NIC	ENSMUSG00000037536.15	novel	2937	2	NA	NA	2	-50118	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCCATGGGTTGTACTT	NA	False	NA	NA	False	AATAAA	-28	NA	47710034	47713575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710000_47713600
ES.10621.22	chr14	+	2767	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	43	127	1	-73	multi-exon	FALSE	canonical	3	19	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAACAGCTGACTAAACA	NA	False	NA	NA	False	ATTAAA	-17	NA	47710060	47769284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47710175_47766631
ES.10621.23	chr14	+	3262	3	NNC	ENSMUSG00000037536.15	novel	2993	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGGTCTGGTCTTAA	NA	False	NA	6	True	AATAAA	-14	NA	47710081	47769411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710454_47763661_47763772_47766631
ES.10621.24	chr14	+	3419	2	NIC	ENSMUSG00000037536.15	novel	2937	2	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGGTCTGGTCTTAA	NA	False	NA	6	True	AATAAA	-14	NA	47710082	47769411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710722_47766631
ES.10621.25	chr14	+	3501	5	NNC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.9318314493423	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710090	47769419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47742442_47742590_47753131_47753504_47763661_47763772_47766631
ES.10621.26	chr14	+	3189	4	NIC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.29983164553722	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTGGTCTTAAAATAAGA	NA	False	NA	13	True	AATAAA	-21	NA	47710092	47769418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47742442_47742590_47746513_47746687_47766631
ES.10621.27	chr14	+	4050	6	NNC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.024436151035	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710110	47769415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47738250_47738328_47742442_47742590_47752635_47753504_47763661_47763772_47766631
ES.10621.3	chr14	+	3422	5	NIC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	36.4623093070091	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCTGGTCTTAAAATAAG	NA	False	NA	12	True	AATAAA	-20	NA	47709977	47769417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47742442_47742590_47744721_47744904_47763661_47763772_47766631
ES.10621.4	chr14	+	3267	4	NIC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	40.0027776813339	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	False	NA	7	True	AATAAA	-15	NA	47709980	47769412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47744721_47744904_47763661_47763772_47766631
ES.10621.5	chr14	+	3160	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	-23	-5	-23	5	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAATAAGATTTTAC	NA	False	NA	19	True	AATAAA	-27	NA	47709994	47769424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
ES.10621.7	chr14	+	2964	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	-23	-4	-23	0	multi-exon	FALSE	canonical	3	19	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47709994	47769415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47710175_47766631
ES.10621.8	chr14	+	3224	4	NIC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	40.5490101262931	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47709995	47769419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47710175_47742442_47742590_47763661_47763772_47766631
ES.10621.9	chr14	+	3770	7	NNC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	-22	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.8854278742681	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGGTTAAAAATTTTT	NA	False	NA	-45	True	ATTAAA	-16	NA	47709995	47769360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47710175_47740311_47740562_47742442_47742590_47744721_47744904_47746513_47746687_47763661_47763772_47766631
ES.10622.1	chr14	+	799	1	Antisense	novelGene_ENSMUSG00000037526.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACCAAAAAAAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	47783240	47784039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_47783200_47784000
ES.10623.1	chr14	+	181	1	Intergenic	novelGene_8900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAGAAAAAAA	4604	False	NA	NA	False	NA	NA	NA	47790940	47791121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47790900_47791100
ES.10624.1	chr14	+	176	1	Intergenic	novelGene_8901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAAATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	47802491	47802667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47802500_47802700
ES.10625.1	chr14	+	281	1	Intergenic	novelGene_8902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47808133	47808414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47808100_47808400
ES.10626.1	chr14	+	179	1	Intergenic	novelGene_8903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	47811516	47811695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47811500_47811700
ES.10626.2	chr14	+	366	1	Intergenic	novelGene_8904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAACCTA	NA	False	NA	NA	False	NA	NA	NA	47811516	47811882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47811500_47811900
ES.10627.1	chr14	+	176	1	Intergenic	novelGene_8905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGACATTT	NA	False	NA	NA	False	NA	NA	NA	47812747	47812923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47812700_47812900
ES.10628.1	chr14	-	177	2	Antisense	novelGene_ENSMUSG00000115571.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAACACA	NA	False	NA	NA	False	NA	NA	NA	47821139	47705893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47706016_47821084
ES.10628.10	chr14	-	4190	14	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6170	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	58.3169264049936	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814276	47778349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47809102_47809269_47812373_47812595_47813988_47814069_47814201
ES.10628.11	chr14	-	3829	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	62.0727060255418	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814228	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47804990_47805062_47805642_47806089_47813984_47814069_47814201
ES.10628.12	chr14	-	3633	13	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	-6128	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	62.0727060255418	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814234	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47798232_47798379_47799415_47799589_47813988_47814069_47814201
ES.10628.13	chr14	-	5469	3	ISM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	19511	0	11716	0	intron_retention	FALSE	canonical	3	128	junction_2	22.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47786380	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47780601_47783084_47783171_47783247
ES.10628.14	chr14	-	3942	10	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.2174444650581	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47805869	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784183_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ES.10628.16	chr14	-	3748	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6239	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	50.2037172243301	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814345	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814324
ES.10628.17	chr14	-	3478	12	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	-9669	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.2710962755724	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47817775	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47813988_47814069_47814388_47814538_47817727
ES.10628.18	chr14	-	3929	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6128	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	55.750685097933	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814234	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47809102_47809272_47813988_47814069_47814201
ES.10628.19	chr14	-	6434	14	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	60.2011421386081	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814275	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47809102_47809272_47810993_47813458_47813988_47814069_47814201
ES.10628.2	chr14	-	4850	1	Antisense	novelGene_ENSMUSG00000037536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGCCAACTAAATTAT	8251	False	NA	NA	False	NA	NA	NA	47715792	47710942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47710900_47715800
ES.10628.21	chr14	-	4119	14	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6149	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	60.2011421386081	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814255	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47809102_47809269_47812373_47812546_47813988_47814069_47814201
ES.10628.22	chr14	-	3603	10	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.2706538362926	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47805871	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792272_47796630_47796674_47798077_47798141_47805642
ES.10628.24	chr14	-	4032	14	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	60.3181898242034	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814260	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47808025_47808100_47812373_47812546_47813988_47814069_47814201
ES.10628.25	chr14	-	4003	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6336	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.942161200838	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814442	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812595_47813988_47814069_47814387
ES.10628.27	chr14	-	3783	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6164	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.6783857940233	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47814270	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798128_47805642_47806089_47813988_47814069_47814201
ES.10628.28	chr14	-	4946	10	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.226688774992	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47805886	47778350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47785108_47785166_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ES.10628.3	chr14	-	1707	1	Antisense	novelGene_ENSMUSG00000037536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	47765258	47763551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47763600_47765300
ES.10628.30	chr14	-	3976	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6180	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.7956864559273	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47814286	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812595_47813988_47814069_47814257
ES.10628.31	chr14	-	4191	11	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6427	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	38.0820167533181	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47814533	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988
ES.10628.32	chr14	-	3376	10	NNC	ENSMUSG00000037526.8	novel	3450	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.2313668067844	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47805869	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805693
ES.10628.33	chr14	-	3658	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6149	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	62.0727060255418	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47814255	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47798982_47799146_47799415_47799577_47813988_47814069_47814201
ES.10628.34	chr14	-	3841	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6139	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.058478446705	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47814245	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47802365_47802437_47805642_47806089_47813988_47814069_47814201
ES.10628.35	chr14	-	3590	11	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.606564360694	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGGCTGTGTGTGTCTG	NA	False	NA	-6	True	AATAAA	-12	NA	47805869	47778351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47798982_47799146_47805642
ES.10628.36	chr14	-	3578	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.2710962755724	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGGCTGTGTGTGTCT	NA	False	NA	-7	True	AATAAA	-11	NA	47814275	47778352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47812373_47812595_47813984_47814069_47814201
ES.10628.37	chr14	-	3915	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	59.0288888784316	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGGCTGTGTGTGTCT	NA	False	NA	-7	True	AATAAA	-11	NA	47814275	47778352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812546_47813988_47814069_47814257
ES.10628.38	chr14	-	3832	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6131	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.6696427841433	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTGGCTGTGTGTGTCT	NA	False	NA	-7	True	AATAAA	-11	NA	47814237	47778352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784183_47784255_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814201
ES.10628.39	chr14	-	3673	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6143	-323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.9554214143491	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCTGGTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	47814249	47778673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812595_47813988_47814069_47814201
ES.10628.4	chr14	-	3550	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	22	-122	-8	121	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTGCTAGGTAAGAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	47805869	47778228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ES.10628.40	chr14	-	3206	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6138	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.8129994633052	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTAGAAAAAAAAAAATGAA	NA	False	NA	NA	False	ATTAAA	-40	NA	47814244	47778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47812373_47812595_47813988_47814069_47814201
ES.10628.41	chr14	-	1857	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	22	1571	-8	-1571	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTATTGTCAGTCAT	NA	False	NA	NA	False	AATGAA	-12	NA	47805869	47779921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ES.10628.42	chr14	-	174	1	Intergenic	novelGene_8906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	47821143	47820969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_47821000_47821100
ES.10628.5	chr14	-	5820	9	ISM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	5134	-2	-2661	1	3prime_fragment	FALSE	canonical	3	110	junction_3	18.6342259028917	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTGTGTCTGTCC	NA	False	NA	-3	True	AATAAA	-15	NA	47800757	47778348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077
ES.10628.6	chr14	-	4023	13	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6169	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.9554214143491	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814275	47778349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47812373_47812595_47813988_47814069_47814201
ES.10628.7	chr14	-	3787	12	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6154	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	46.0637359383175	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814260	47778349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47813988_47814069_47814201
ES.10628.8	chr14	-	3455	10	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.2313668067844	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47805869	47778349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798167_47805642
ES.10628.9	chr14	-	3341	11	NNC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	-6154	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	47.2847755625423	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47814260	47778349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47813988_47814069_47814201
ES.10629.1	chr14	+	231	1	Intergenic	novelGene_8907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAGGGCTGCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	47828682	47828913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47828700_47828900
ES.1063.1	chr1	+	157	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	93585192	93585349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93585200_93585300
ES.10630.1	chr14	+	159	1	Intergenic	novelGene_8908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	47831720	47831879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_47831700_47831900
ES.10631.1	chr14	+	4398	40	NIC	ENSMUSG00000021843.18	novel	7945	43	NA	NA	-64	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	178.978517327344	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47885840	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886035_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.10	chr14	+	4481	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	142.486178072921	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886565	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.100	chr14	+	4134	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	-89	combination_of_known_junctions	FALSE	canonical	3	145	junction_38	176.407304781434	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTGTCAGACACTG	NA	False	NA	7	True	ATTAAA	-22	NA	47886763	47973647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.101	chr14	+	4324	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_39	198.455396446401	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886763	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.102	chr14	+	4599	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	223.836362372563	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886763	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904764_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.103	chr14	+	4221	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-4	111	combination_of_known_junctions	FALSE	canonical	3	70	junction_39	179.139509432116	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886763	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.104	chr14	+	4169	38	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	181.502490691175	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886763	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938552_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.106	chr14	+	4713	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	433	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	172.138359927265	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTTTGATTTTAAGT	NA	False	NA	NA	False	ATTAAA	-30	NA	47886763	47974454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.107	chr14	+	4603	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	198.242723700014	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886763	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901947_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.108	chr14	+	4197	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-3	114	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.349273439967	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886764	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.109	chr14	+	4395	41	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_40	206.348515865756	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886764	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.11	chr14	+	4734	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-201	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	230.268454147783	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886566	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928364_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.110	chr14	+	4677	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	219.97542637444	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886764	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.112	chr14	+	4372	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	188.969502077237	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886766	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.114	chr14	+	4871	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	215.248192501122	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTGATTTTGATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	47886767	47974449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932103_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.115	chr14	+	4173	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	111	combination_of_known_junctions	FALSE	canonical	3	329	junction_35	142.357057734826	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886767	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.116	chr14	+	4799	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.989041701277	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886767	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.117	chr14	+	4052	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	109	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	176.559070180939	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886767	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.119	chr14	+	4378	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	197.094389959692	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886767	47974015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.12	chr14	+	4460	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-201	1	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886566	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.120	chr14	+	5758	36	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	-2	intron_retention	FALSE	canonical	3	129	junction_1	157.083121113554	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886767	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.121	chr14	+	4316	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	194.220226505784	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886767	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.122	chr14	+	3855	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	-88	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	168.59969349972	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886768	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.123	chr14	+	8506	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_21	170.748598831504	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886768	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940622_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.125	chr14	+	4150	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	187.294191757054	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGTTGTAAAGATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	47886768	47964299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946354_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927
ES.10631.126	chr14	+	7068	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	201.082610054878	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGACTCACTCTGATT	NA	False	NA	16	True	AATAAA	-16	NA	47886768	47974013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928348_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683
ES.10631.127	chr14	+	4372	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	179.305136416308	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886768	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.129	chr14	+	4231	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	182.114355271056	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886768	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.13	chr14	+	4648	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	203.252352354585	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886568	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.130	chr14	+	4410	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	168.511683571199	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886768	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.131	chr14	+	3984	38	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	114	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	169.00240531481	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886768	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.132	chr14	+	6238	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	-1	intron_retention	FALSE	canonical	3	129	junction_1	175.448833647133	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCACTCTGATTGTCG	NA	False	NA	20	True	AATAAA	-20	NA	47886768	47974017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611
ES.10631.133	chr14	+	4409	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	204.990237572427	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886768	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.134	chr14	+	4544	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_41	203.072028259706	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886768	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.135	chr14	+	4474	39	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	1	2628	1	-2350	5prime_fragment	FALSE	canonical	3	329	junction_35	144.074205641752	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCACAGATTATAGAGT	NA	False	NA	NA	False	AATACA	-10	NA	47886768	47971386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683
ES.10631.136	chr14	+	4343	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	111	combination_of_known_junctions	FALSE	canonical	3	145	junction_38	176.407304781434	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886768	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.137	chr14	+	4195	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	191.058461923507	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886768	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941938_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.138	chr14	+	4335	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	221.140899654496	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886768	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949641_47949696_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.139	chr14	+	4715	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	241.923063612139	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886768	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.14	chr14	+	4479	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-196	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	167.513152162066	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886571	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.140	chr14	+	4269	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	170.257186912303	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886768	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.142	chr14	+	3971	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	-88	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	171.166493338546	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886768	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.143	chr14	+	4275	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_35	180.114306580302	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886768	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.144	chr14	+	4034	38	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	114	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	141.712210556787	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886768	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.145	chr14	+	4303	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	111	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	178.133594529499	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886768	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.146	chr14	+	4402	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	218.348789628391	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886768	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927452_47927500_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.147	chr14	+	4381	42	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	227.049203628929	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAAGTGGTATAGACAA	NA	False	NA	NA	False	ATTAAA	-11	NA	47886768	47973857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.148	chr14	+	4202	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	104	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	166.916953527795	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATCAAAGTGGTATAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	47886768	47973854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.149	chr14	+	4099	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	-95	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	197.039703750928	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	NA	False	NA	1	True	ATTAAA	-16	NA	47886768	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.15	chr14	+	4652	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-194	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	173.452039480659	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886573	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.150	chr14	+	4327	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	1	101	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	195.773166340874	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGATCAAAGTGGTAT	NA	False	NA	NA	False	ATTAAA	-5	NA	47886768	47973851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.151	chr14	+	4397	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	224.164311155438	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886768	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47887988_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.152	chr14	+	4379	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	216.774192708886	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886768	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.153	chr14	+	4125	38	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	202.390913362091	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886771	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920845_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.154	chr14	+	4599	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_16	267.225162550236	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886771	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904755_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932109_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943529_47943639_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.156	chr14	+	4445	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	212.517291943503	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886771	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.157	chr14	+	4293	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	204.278905267797	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.159	chr14	+	4186	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	215.695075629857	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886773	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932109_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961451_47962122_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.160	chr14	+	4529	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	232.107755148336	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACATGACTCACTCTG	NA	False	NA	13	True	AATAAA	-13	NA	47886774	47974010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.162	chr14	+	4524	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.851722630466	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886774	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.163	chr14	+	4128	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	111	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	191.410175691672	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886774	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.164	chr14	+	4299	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_38	187.9007093994	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886774	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.165	chr14	+	3031	28	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	165.652999742628	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886774	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944733_47973873
ES.10631.166	chr14	+	4416	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	218.574955511507	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886774	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930957_47931340_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.167	chr14	+	4381	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	182.114355271056	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886774	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.169	chr14	+	4129	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	109	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	204.278905267797	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886774	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.17	chr14	+	4614	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-194	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886573	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.170	chr14	+	4665	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	222.145920496923	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886774	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.172	chr14	+	4253	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	114	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886774	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.173	chr14	+	4261	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	2	107	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAAGTGGTATAGACAA	NA	False	NA	NA	False	ATTAAA	-11	NA	47886774	47973857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.174	chr14	+	4015	41	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	2	-88	combination_of_known_splicesites	FALSE	canonical	3	21	junction_40	206.348515865756	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886774	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.175	chr14	+	3984	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	3	-94	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	174.327531101471	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCTACTTTGTCAGA	NA	False	NA	2	True	ATTAAA	-17	NA	47886775	47973642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.176	chr14	+	4449	41	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	178.133594529499	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886775	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.177	chr14	+	4176	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	3	110	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	171.166493338546	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTGGTATAGACAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	47886775	47973860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.178	chr14	+	4435	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	211.466748222521	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886775	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.18	chr14	+	4128	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-193	-88	combination_of_known_junctions	FALSE	canonical	3	70	junction_38	187.9007093994	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886574	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.180	chr14	+	4616	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	221.220759367199	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886777	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887563_47887758_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.181	chr14	+	4112	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	5	114	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	142.486178072921	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886777	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.182	chr14	+	4433	28	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	-3114	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	118.840488590358	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGGAGTATATGATATT	NA	False	NA	NA	False	ATTAAA	-30	NA	47886778	47949819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298
ES.10631.183	chr14	+	4346	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	188.61873581381	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886778	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.185	chr14	+	4512	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	204.715751628696	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCACTCTGATTGTCG	NA	False	NA	20	True	AATAAA	-20	NA	47886778	47974017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.186	chr14	+	4463	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	224.536433569254	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886778	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.187	chr14	+	4452	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	220.103213004717	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886778	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.188	chr14	+	4528	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	260.429697807297	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886778	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944741_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.189	chr14	+	7576	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	161.23728020007	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCCTGTGGATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	47886778	47977353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.19	chr14	+	4654	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-193	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	238.131955181418	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886574	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.190	chr14	+	4442	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	201.105679618951	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886778	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.192	chr14	+	4537	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	225.564602719487	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886778	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.193	chr14	+	4279	41	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	112	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	184.939434342706	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTATAGACAATGTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	47886778	47973862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.194	chr14	+	4133	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.559149363838	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886778	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.195	chr14	+	4188	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	-86	combination_of_known_junctions	FALSE	canonical	3	70	junction_42	220.186047904062	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGTCAGACACTGGAC	NA	False	NA	10	True	ATTAAA	-25	NA	47886778	47973650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.196	chr14	+	4687	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	237.662821619296	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886778	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.197	chr14	+	4362	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_26	217.20803554078	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886778	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944735_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.198	chr14	+	7620	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	175.748048995823	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTCCTGTGGATTAC	NA	False	NA	NA	False	AATAAA	-15	NA	47886778	47977351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.199	chr14	+	4348	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	199.592398590927	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886778	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.2	chr14	+	4416	41	NIC	ENSMUSG00000021843.18	novel	7945	43	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	178.063893027194	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47885909	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886035_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.20	chr14	+	4384	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-193	114	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886574	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.200	chr14	+	4203	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	174.327531101471	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886778	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.201	chr14	+	3897	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	6	-90	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	167.513152162066	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTGTCAGACACT	NA	False	NA	6	True	ATTAAA	-21	NA	47886778	47973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.202	chr14	+	4346	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	197.223691211274	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886778	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914154_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.204	chr14	+	4435	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	80	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	223.100679395954	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGCTCAATTAAATTG	NA	False	NA	NA	False	AGTAAA	-16	NA	47886778	47973830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.205	chr14	+	4363	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	230.017110531825	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886778	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.206	chr14	+	3877	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	7	-90	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTGTCAGACACT	NA	False	NA	6	True	ATTAAA	-21	NA	47886779	47973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.207	chr14	+	4291	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	210.865109430176	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886780	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914209_47914251_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.208	chr14	+	4346	39	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	225.054982509507	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886780	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.21	chr14	+	5079	2	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	-193	-10053	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTGGAGTTTTCCAAT	NA	False	NA	NA	False	NA	NA	NA	47886574	47891719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47890208_47890273
ES.10631.210	chr14	+	4204	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	199.908982059419	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886780	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.213	chr14	+	4263	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	220.570117779655	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886781	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954408_47957657_47957743_47962104_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.215	chr14	+	4225	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	9	81	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	203.744269858075	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCTCAATTAAATTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	47886781	47973831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.216	chr14	+	4432	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	198.118373706226	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886785	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.217	chr14	+	3795	38	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	14	-93	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	141.712210556787	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCTACTTTGTCAGAC	NA	False	NA	3	True	ATTAAA	-18	NA	47886786	47973643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.219	chr14	+	5892	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-2	intron_retention	FALSE	canonical	3	405	junction_35	133.654205604988	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886786	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.22	chr14	+	4543	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-193	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.349273439967	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886574	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.221	chr14	+	4051	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	14	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	206.706410157015	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTGTCAGACACT	NA	False	NA	6	True	ATTAAA	-21	NA	47886786	47973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904750_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.222	chr14	+	4998	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	14	0	intron_retention	FALSE	canonical	3	145	junction_36	178.418831465272	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886786	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.224	chr14	+	4872	44	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.244190003915	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886786	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887563_47887758_47887855_47888029_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.226	chr14	+	4391	38	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-2	intron_retention	FALSE	canonical	3	256	junction_23	144.115270193671	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886786	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.227	chr14	+	3983	37	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	123	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	170.46252212911	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGTGAAATTTAACATT	NA	False	NA	NA	False	ATTAAA	-27	NA	47886786	47973873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.228	chr14	+	4105	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	202.382958628003	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886786	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912307_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.229	chr14	+	4425	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	105	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_42	224.367046217958	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCAAAGTGGTATAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	47886786	47973855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.23	chr14	+	4530	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	177.302124613624	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886575	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.231	chr14	+	4025	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-88	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886786	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.232	chr14	+	4476	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	225.96039475979	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886786	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.233	chr14	+	4233	39	NNC	ENSMUSG00000021843.18	novel	3962	39	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_38	224.679556362148	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886786	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.234	chr14	+	3939	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	14	-90	combination_of_known_junctions	FALSE	canonical	3	329	junction_35	142.357057734826	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTGTCAGACACT	NA	False	NA	6	True	ATTAAA	-21	NA	47886786	47973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.235	chr14	+	4354	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.851722630466	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAAAGTGGTATAGACA	NA	False	NA	NA	False	ATTAAA	-10	NA	47886786	47973856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.237	chr14	+	4523	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_41	217.159612824298	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886786	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.238	chr14	+	9672	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-1	intron_retention	FALSE	canonical	3	145	junction_37	190.532569394316	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATTTTCCTGTGGATTA	NA	False	NA	NA	False	AATAAA	-14	NA	47886786	47977350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611
ES.10631.239	chr14	+	4367	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_39	190.811382164286	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886786	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.24	chr14	+	4418	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-192	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	236.272044526946	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTTTGTCAGACACT	NA	False	NA	6	True	ATTAAA	-21	NA	47886575	47973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.240	chr14	+	4399	40	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	230.467900132433	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886787	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47889718_47889844_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.241	chr14	+	4271	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	35	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	204.715751628696	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTTACATTCCTAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	47886787	47973785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.243	chr14	+	4497	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	207.517445049808	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886787	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.244	chr14	+	4336	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	109	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	219.532854887372	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886787	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.245	chr14	+	4275	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	111	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	201.105679618951	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886787	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.246	chr14	+	3809	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	189.209832734253	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886787	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931340_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.247	chr14	+	4258	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	114	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	184.773021231456	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886787	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.248	chr14	+	4322	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	-114	combination_of_known_splicesites	FALSE	canonical	3	21	junction_40	195.738906135188	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGTACACTGCTTTA	NA	False	NA	-97	True	NA	NA	NA	47886787	47973900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.249	chr14	+	4702	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	-2	intron_retention	FALSE	non_canonical	0	0	junction_35	224.511123054071	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886787	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961506_47962108_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.25	chr14	+	4447	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-192	106	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAAAGTGGTATAGACA	NA	False	NA	NA	False	ATTAAA	-10	NA	47886575	47973856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.250	chr14	+	4326	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	114	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	220.353800738721	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886787	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.251	chr14	+	4677	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	433	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTTTGATTTTAAGT	NA	False	NA	NA	False	ATTAAA	-30	NA	47886787	47974454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.254	chr14	+	4148	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	-95	combination_of_known_junctions	FALSE	canonical	3	70	junction_41	203.072028259706	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	NA	False	NA	1	True	ATTAAA	-16	NA	47886787	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.256	chr14	+	4246	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	180.901958801061	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886787	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.257	chr14	+	4675	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	220.797251576769	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886787	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.258	chr14	+	4319	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	205.625848279356	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886787	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.259	chr14	+	4428	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	219.359395456406	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886787	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928364_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.26	chr14	+	4717	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-190	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	179.305136416308	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886577	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.261	chr14	+	4212	40	NIC	ENSMUSG00000021843.18	novel	3962	39	NA	NA	16	109	combination_of_known_junctions	FALSE	canonical	3	70	junction_39	186.688805393284	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886788	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.262	chr14	+	4099	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	16	43	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	186.073836729721	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTCCTAAAGATGAAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	47886788	47973793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.263	chr14	+	4163	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	16	-95	combination_of_known_junctions	FALSE	canonical	3	128	junction_42	216.882482782424	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	NA	False	NA	1	True	ATTAAA	-16	NA	47886788	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.265	chr14	+	4432	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	217.222741385427	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACATGACTCACTCTG	NA	False	NA	13	True	AATAAA	-13	NA	47886789	47974010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940622_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.266	chr14	+	4410	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	225.857122978223	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886789	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907684_47910393_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.267	chr14	+	3853	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	17	-95	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	161.23728020007	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	NA	False	NA	1	True	ATTAAA	-16	NA	47886789	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.268	chr14	+	4102	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	18	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	173.096764845563	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATTAGACCTTTACA	NA	False	NA	NA	False	AATAAA	-7	NA	47886790	47973776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963432_47963706_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.27	chr14	+	2887	21	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-189	-2482	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	149.513410769737	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACTTAAATTATTTATA	NA	False	NA	NA	False	AATAAA	-25	NA	47886578	47939412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131
ES.10631.270	chr14	+	3864	39	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	19	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	169.8056592442	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	NA	False	NA	1	True	ATTAAA	-16	NA	47886791	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904745_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.271	chr14	+	4441	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	171.767770252475	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886791	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.273	chr14	+	4424	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	19	114	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	217.338681140858	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886791	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.274	chr14	+	7725	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	19	2	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCCTGTGGATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	47886791	47977353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.277	chr14	+	4423	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	217.91636010176	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886792	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.278	chr14	+	4477	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	20	1	intron_retention	FALSE	canonical	3	64	junction_2	199.452512416217	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886792	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.279	chr14	+	5219	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	20	9516	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_38	193.352103715166	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTTGCAGCGTCGT	NA	False	NA	NA	False	NA	NA	NA	47886792	47986867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47985369
ES.10631.28	chr14	+	4669	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-189	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_41	225.688816734038	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTGATTGTCGTTGAG	NA	False	NA	25	True	AATAAA	-25	NA	47886578	47974022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.281	chr14	+	4415	41	FSM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	27	-6	22	0	multi-exon	FALSE	canonical	3	128	junction_40	180.470106596633	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886794	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.282	chr14	+	4470	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	195.773166340874	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886794	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.283	chr14	+	4586	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_42	202.732909644836	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886795	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.285	chr14	+	4605	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	242.776219352157	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886796	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.286	chr14	+	4670	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	248.487323848479	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886797	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.287	chr14	+	4361	40	NNC	ENSMUSG00000021843.18	novel	3962	39	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_39	206.349078368009	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGATTGTCGTTGAGT	NA	False	NA	26	True	AATAAA	-26	NA	47886797	47974023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.288	chr14	+	4292	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	171.583252747097	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886797	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929932_47930879_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.289	chr14	+	4279	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	27	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	227.801025096125	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886799	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.29	chr14	+	4820	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	219.665989484825	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886578	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.290	chr14	+	4215	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	293.441684429232	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886800	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47889718_47889844_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914170_47914228_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.293	chr14	+	7754	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	30	1	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	173.452039480659	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTCCTGTGGATTACT	NA	False	NA	NA	False	AATAAA	-16	NA	47886802	47977352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.294	chr14	+	4511	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	30	0	intron_retention	FALSE	canonical	3	145	junction_36	179.233553406349	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886802	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.295	chr14	+	4122	37	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	182.101643286529	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886802	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931409_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.297	chr14	+	4323	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	208.229589948637	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886806	47974015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.298	chr14	+	4014	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	34	-94	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCTACTTTGTCAGA	NA	False	NA	2	True	ATTAAA	-17	NA	47886806	47973642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.299	chr14	+	4520	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	34	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_42	216.882482782424	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886806	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.3	chr14	+	4093	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	205.229647422477	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886000	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886035_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.300	chr14	+	3288	24	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	34	335	intron_retention	FALSE	canonical	2	18	junction_1	233.404044556051	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTCGCTGGA	NA	False	NA	NA	False	NA	NA	NA	47886806	47942229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643
ES.10631.301	chr14	+	3718	34	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	241.789726433939	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886806	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.303	chr14	+	4561	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	210.086244461099	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886806	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.304	chr14	+	4458	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	218.724575665379	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886806	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.305	chr14	+	4439	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	34	1	intron_retention	FALSE	canonical	3	405	junction_35	133.611648873448	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	47886806	47974015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.306	chr14	+	4451	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_36	196.750674912501	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886807	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963391_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.307	chr14	+	4462	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	246.779451129951	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886807	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.308	chr14	+	3885	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	233.56947307699	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886807	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938073_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.309	chr14	+	4366	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	1	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	226.814504331182	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886807	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.31	chr14	+	4624	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	184.773021231456	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886578	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.311	chr14	+	4102	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	108	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	209.919084793796	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTGGTATAGACAAT	NA	False	NA	NA	False	ATTAAA	-12	NA	47886807	47973858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.313	chr14	+	4578	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	220.508133035255	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886807	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.314	chr14	+	4097	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	34	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	188.969502077237	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCTTTACATTCCTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	47886807	47973784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.315	chr14	+	4472	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	213.319125666219	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.316	chr14	+	4490	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.415269488758	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887096_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961509_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.317	chr14	+	4292	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	235.525667679882	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTACTTTGTCAGACAC	NA	False	NA	5	True	ATTAAA	-20	NA	47886807	47973645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.32	chr14	+	4559	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	174.327531101471	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886578	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.321	chr14	+	4424	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	227.581963257197	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886807	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.322	chr14	+	4546	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	199.574431225666	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886807	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.323	chr14	+	3973	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-88	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	209.190732720518	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886807	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.324	chr14	+	4167	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	198.491215083625	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886807	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.325	chr14	+	4236	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	189.953144850668	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886807	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.326	chr14	+	4219	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	174.026791327436	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886807	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.327	chr14	+	4490	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	219.951976803894	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886807	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.328	chr14	+	4436	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	202.765783891642	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886807	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938590_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.329	chr14	+	4256	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	175.748048995823	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886807	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.33	chr14	+	4537	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886578	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.330	chr14	+	4303	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	intron_retention	FALSE	canonical	0	0	junction_6	203.047076838624	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886807	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912307_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.331	chr14	+	4420	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	111	combination_of_known_junctions	FALSE	canonical	3	70	junction_42	206.342273387806	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886807	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.334	chr14	+	4153	37	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	178.64000111957	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886807	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932109_47938493_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.335	chr14	+	4284	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	170.817033426449	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944741_47946283_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.336	chr14	+	4189	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	209.190732720518	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886807	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.337	chr14	+	4105	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_38	183.198953731181	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886807	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.339	chr14	+	7724	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	2	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCCTGTGGATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	47886807	47977353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.34	chr14	+	4175	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-186	-77	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.349273439967	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGGACAGTTTTGTC	NA	False	NA	19	True	ATTAAA	-34	NA	47886581	47973659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.340	chr14	+	4523	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	230.698113072041	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886807	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.341	chr14	+	4143	38	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	170.698123965089	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.342	chr14	+	4436	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	210.909453320613	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886807	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.343	chr14	+	4346	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	204.676926826157	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886808	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938590_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.345	chr14	+	4344	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	234.961548362289	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886809	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932102_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.347	chr14	+	4026	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	169.080700380017	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886809	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929923_47931349_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.348	chr14	+	4418	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	219.852446137318	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886809	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901331_47901405_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.35	chr14	+	7779	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-186	2	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCCTGTGGATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	47886581	47977353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.350	chr14	+	4513	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	0	intron_retention	FALSE	canonical	3	329	junction_35	144.186452450806	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886809	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.352	chr14	+	4368	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	178.076947904551	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886809	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930868_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.353	chr14	+	4278	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	189.26521818321	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886809	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930944_47931340_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.354	chr14	+	4336	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	248.603637490096	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886809	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949948_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.356	chr14	+	4162	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	37	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	199.592398590927	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886809	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.357	chr14	+	4343	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	114	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	199.259384223355	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886809	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.359	chr14	+	4774	44	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.683689066795	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886809	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47889718_47889844_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.36	chr14	+	4395	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.488430792916	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886582	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.360	chr14	+	4492	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	219.91872220209	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886809	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.361	chr14	+	4915	42	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	37	420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	251.624745389963	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTATTTTAAATTTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	47886809	47974441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932109_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971639_47973556
ES.10631.362	chr14	+	4285	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	168.257566872915	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886809	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941888_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.363	chr14	+	4561	42	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	222.965057831227	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886810	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.366	chr14	+	4232	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	221.743144562949	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886811	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.367	chr14	+	4551	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	208.105296894771	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886811	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.37	chr14	+	4449	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886582	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.370	chr14	+	4469	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	219.532854887372	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886811	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.371	chr14	+	4245	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-39	39	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	195.016608267091	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTACATTCCTAAAGATGA	NA	False	NA	NA	False	AATAAA	-20	NA	47886811	47973789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.373	chr14	+	6015	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-39	111	intron_retention	FALSE	canonical	1	4	junction_31	190.574537732964	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886811	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957657_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611
ES.10631.374	chr14	+	4383	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	204.173821473273	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886811	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.375	chr14	+	4201	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-39	104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	224.301742150807	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATCAAAGTGGTATAGA	NA	False	NA	NA	False	ATTAAA	-8	NA	47886811	47973854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943851_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.377	chr14	+	4421	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	213.91498165159	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886811	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.379	chr14	+	3857	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-34	-88	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	142.486178072921	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886816	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.38	chr14	+	4132	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-184	-88	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	194.220226505784	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886583	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.381	chr14	+	4343	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-34	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.697204751115	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886816	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.382	chr14	+	3979	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-32	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	230.863668083562	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTTACATTCCTAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	47886818	47973785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929923_47930882_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.383	chr14	+	4119	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-31	-91	combination_of_known_splicesites	FALSE	canonical	3	21	junction_41	217.159612824298	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTACTTTGTCAGACAC	NA	False	NA	5	True	ATTAAA	-20	NA	47886819	47973645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.385	chr14	+	4376	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	221.568272622924	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886820	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556_47973908_47973961
ES.10631.386	chr14	+	4365	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	222.045828603016	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886820	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.39	chr14	+	4682	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-181	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_38	176.407304781434	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886586	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.391	chr14	+	4280	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	161.030168971125	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886820	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.392	chr14	+	4170	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-30	102	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	214.968792744536	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGATCAAAGTGGTATA	NA	False	NA	NA	False	ATTAAA	-6	NA	47886820	47973852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.394	chr14	+	4125	38	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	181.36649149352	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886821	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922301_47923708_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.396	chr14	+	4267	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	169.140795818139	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886822	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.398	chr14	+	3932	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-27	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	199.592398590927	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTACTTTGTCAGACAC	NA	False	NA	5	True	ATTAAA	-20	NA	47886823	47973645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.399	chr14	+	4468	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	198.369105964288	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886823	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.4	chr14	+	4161	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	100	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	171.976035903866	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886004	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886035_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.40	chr14	+	4151	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-181	-93	combination_of_known_junctions	FALSE	canonical	3	405	junction_36	132.185085310088	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCTACTTTGTCAGAC	NA	False	NA	3	True	ATTAAA	-18	NA	47886586	47973643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.400	chr14	+	4243	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-26	117	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	194.426134337095	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGACAATGTGAAATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	47886824	47973867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.402	chr14	+	4162	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-18	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	249.510078797297	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886832	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910480_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.403	chr14	+	4217	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-17	-88	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	214.948992495894	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTGTCAGACACTGG	NA	False	NA	8	True	ATTAAA	-23	NA	47886833	47973648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
ES.10631.405	chr14	+	4381	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	222.39119671201	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886833	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929932_47930862_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.407	chr14	+	3840	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-16	-69	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTTTGTCTTTTCTAA	NA	False	NA	27	True	ATTAAA	-42	NA	47886834	47973667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.408	chr14	+	7527	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTCCTGTGGATTAC	NA	False	NA	NA	False	AATAAA	-15	NA	47886834	47977351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.41	chr14	+	4405	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-181	1	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	193.53636376589	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886586	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.410	chr14	+	5546	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-15	-2	intron_retention	FALSE	non_canonical	0	0	junction_23	199.182289593063	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47886835	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47943077_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961510_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.412	chr14	+	4927	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-12	430	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	230.698113072041	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGATTTTGATTTTA	NA	False	NA	NA	False	ATTAAA	-27	NA	47886838	47974451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.413	chr14	+	4476	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	259.55682301762	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886838	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887520_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923711_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.414	chr14	+	4260	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	171.795017221523	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886838	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932974_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.417	chr14	+	4713	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-3	419	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	188.969502077237	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTATTTTAAATTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	47886847	47974440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.418	chr14	+	4287	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	25	35	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	177.876635621433	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTTACATTCCTAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	47886875	47973785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.419	chr14	+	4221	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	180.942104797451	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886948	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.42	chr14	+	4533	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-181	4	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	186.073836729721	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCGTTGAGTTT	NA	False	NA	28	True	AATAAA	-28	NA	47886586	47974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.420	chr14	+	4362	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.62501361732	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886951	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887096_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.421	chr14	+	4773	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	114	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	186.810961417471	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886964	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.422	chr14	+	4136	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	512	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.669312905636	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTACATTCCTAAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	47887362	47973786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887521_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.423	chr14	+	4204	38	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	526	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.348608349175	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47887376	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.424	chr14	+	4436	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	558	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	202.309093653746	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47887408	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.425	chr14	+	4235	39	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	560	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.184644899184	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47887410	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887521_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.426	chr14	+	4725	43	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	803	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.540796557371	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47887653	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887758_47887855_47888029_47889718_47889844_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939130_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.427	chr14	+	4196	39	NNC	ENSMUSG00000021843.18	novel	3902	39	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	181.510536311928	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	2351	False	NA	18	True	AATAAA	-18	NA	47901210	47974015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923797_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.43	chr14	+	4558	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-181	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	189.94031792908	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886586	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.430	chr14	+	3905	38	NNC	ENSMUSG00000021843.18	novel	3902	39	NA	NA	169	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	190.044595127898	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	2553	False	NA	19	True	AATAAA	-19	NA	47901412	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962174_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.432	chr14	+	4120	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	247	35	intron_retention	FALSE	canonical	0	0	junction_7	229.142476147483	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTTACATTCCTAAAG	2631	False	NA	NA	False	AATAAA	-16	NA	47901490	47973785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922164_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.435	chr14	+	3466	40	NIC	ENSMUSG00000021843.18	novel	4112	41	NA	NA	429	-95	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	187.047210022284	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTCTACTTTGTCAG	2813	False	NA	1	True	ATTAAA	-16	NA	47901672	47973641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.436	chr14	+	3730	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	3508	1	combination_of_known_junctions	FALSE	canonical	3	329	junction_34	142.825196319141	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	5892	False	NA	22	True	AATAAA	-22	NA	47904751	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.437	chr14	+	3460	38	NNC	ENSMUSG00000021843.18	novel	3902	39	NA	NA	3527	111	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_1	170.835064990303	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	5911	False	NA	NA	False	ATTAAA	-15	NA	47904770	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.438	chr14	+	4800	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	3559	9518	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_39	206.940081276341	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	5943	False	NA	NA	False	NA	NA	NA	47904802	47986869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47985369
ES.10631.439	chr14	+	3476	37	NNC	ENSMUSG00000021843.18	novel	3902	39	NA	NA	3593	1	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_1	162.210661212853	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTCACTCTGATTGT	5977	False	NA	18	True	AATAAA	-18	NA	47904836	47974015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.44	chr14	+	4626	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-179	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	194.426134337095	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886588	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.441	chr14	+	3295	36	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	10961	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_32	179.189299060963	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47912204	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.442	chr14	+	2732	34	NNC	ENSMUSG00000021843.18	novel	3902	39	NA	NA	11038	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	187.309558014043	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGTCAGACACTGGA	NA	False	NA	9	True	ATTAAA	-24	NA	47912281	47973649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941962_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.443	chr14	+	4673	32	NIC	ENSMUSG00000021843.18	novel	4112	41	NA	NA	12955	-2	intron_retention	FALSE	canonical	3	145	junction_28	182.14757712997	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47914198	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.444	chr14	+	2954	33	NNC	ENSMUSG00000021843.18	novel	3913	39	NA	NA	-17260	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	181.615321490231	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47920837	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941875_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.445	chr14	+	3166	32	NNC	ENSMUSG00000021843.18	novel	3913	39	NA	NA	-15818	419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	188.844820646794	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTATTTTAAATTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	47922279	47974440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940622_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.446	chr14	+	6076	32	NNC	ENSMUSG00000021843.18	novel	7945	43	NA	NA	-14346	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_23	193.223146085407	1310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTCCTGTGGATTAC	NA	False	NA	NA	False	AATAAA	-15	NA	47923751	47977351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957657_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.447	chr14	+	5802	29	ISM	ENSMUSG00000021843.18	ENSMUST00000185343.7	3846	38	26252	-3604	-10602	1	3prime_fragment	FALSE	canonical	3	256	junction_13	158.857046505623	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTCCTGTGGATTACT	NA	False	NA	NA	False	AATAAA	-16	NA	47927495	47977352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.448	chr14	+	2156	24	ISM	ENSMUSG00000021843.18	ENSMUST00000188553.7	3918	39	30974	-266	-5880	0	3prime_fragment	FALSE	canonical	3	256	junction_7	182.24603739848	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47932217	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.449	chr14	+	2056	23	ISM	ENSMUSG00000021843.18	ENSMUST00000186761.2	3902	39	31714	-264	-5140	0	3prime_fragment	FALSE	canonical	3	329	junction_18	171.933655280698	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47932957	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.45	chr14	+	4670	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-179	-2346	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	173.150167800722	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGATTATAGAGTTTTC	NA	False	NA	NA	False	AATACA	-14	NA	47886588	47971390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683
ES.10631.450	chr14	+	987	3	ISM	ENSMUSG00000021843.18	ENSMUST00000188330.7	3819	38	31728	34316	-5126	-2474	intron_retention	FALSE	canonical	3	696	junction_1	10	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTATATTTTATGT	NA	False	NA	NA	False	AATAAA	-33	NA	47932971	47939420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47933029_47938076_47938112_47938525
ES.10631.453	chr14	+	4750	16	NIC	ENSMUSG00000021843.18	novel	3918	39	NA	NA	-1389	-2	intron_retention	FALSE	canonical	3	329	junction_11	193.935888604685	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47941722	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.454	chr14	+	1752	17	NIC	ENSMUSG00000021843.18	novel	4112	41	NA	NA	1585	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_16	281.662412905503	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47944696	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.455	chr14	+	1028	11	ISM	ENSMUSG00000021843.18	ENSMUST00000189101.7	3761	37	47053	-28	-3837	28	3prime_fragment	FALSE	canonical	3	354	junction_3	190.099447658324	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTAGACCTTTACATT	NA	False	NA	NA	False	AATAAA	-9	NA	47948296	47973778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.456	chr14	+	4102	9	NIC	ENSMUSG00000021843.18	novel	3846	38	NA	NA	-2910	111	intron_retention	FALSE	canonical	3	405	junction_5	217.159467615391	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47949223	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.457	chr14	+	3386	10	NIC	ENSMUSG00000021843.18	novel	3846	38	NA	NA	-2169	1	intron_retention	FALSE	canonical	3	405	junction_6	206.370097843536	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTGATTGTCGTTGAG	NA	False	NA	25	True	AATAAA	-25	NA	47949964	47974022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.458	chr14	+	2768	10	NNC	ENSMUSG00000021843.18	novel	3984	40	NA	NA	-1572	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	338.772329681786	1263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATGACTCACTCTGAT	NA	False	NA	15	True	AATAAA	-15	NA	47950561	47974012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962420_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.459	chr14	+	4413	10	NIC	ENSMUSG00000021843.18	novel	4112	41	NA	NA	-229	0	intron_retention	FALSE	canonical	3	213	junction_9	251.139083987684	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47951904	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611
ES.10631.46	chr14	+	4593	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	177.511436251302	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886590	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.460	chr14	+	1491	11	NIC	ENSMUSG00000021843.18	novel	4112	41	NA	NA	10	0	intron_retention	FALSE	canonical	3	145	junction_7	274.241298859235	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47952143	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.461	chr14	+	4632	9	ISM	ENSMUSG00000021843.18	ENSMUST00000186761.2	3902	39	56262	-3601	-4719	0	3prime_fragment	FALSE	canonical	3	329	junction_4	218.02375873973	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTCCTGTGGATTAC	NA	False	NA	NA	False	AATAAA	-15	NA	47957505	47977351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.462	chr14	+	4067	2	FSM	ENSMUSG00000021843.18	ENSMUST00000190857.2	4100	2	33	0	33	0	multi-exon	FALSE	canonical	3	1071	junction_1	0	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47967148	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_47967881_47970683
ES.10631.47	chr14	+	4663	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_41	200.929168207421	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886590	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.48	chr14	+	4638	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-175	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	224.97127455522	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886592	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.49	chr14	+	4579	43	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-175	105	combination_of_known_junctions	FALSE	canonical	3	70	junction_42	220.186047904062	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCAAAGTGGTATAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	47886592	47973855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.5	chr14	+	4652	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-319	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_35	142.357057734826	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886448	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.50	chr14	+	4489	37	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-175	0	intron_retention	FALSE	canonical	0	0	junction_16	176.742565370033	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886592	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.51	chr14	+	4309	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-175	-120	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTGATGTTGTACACT	NA	False	NA	NA	False	NA	NA	NA	47886592	47973894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.52	chr14	+	4602	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-175	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	196.413677415477	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886592	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.53	chr14	+	4539	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-175	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	196.097705238996	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886592	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.54	chr14	+	4314	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-173	114	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.321878224553	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886594	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.56	chr14	+	4614	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	205.785561932804	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886599	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.57	chr14	+	4600	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886599	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.58	chr14	+	4332	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-164	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	209.669725568226	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886603	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901247_47901375_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.59	chr14	+	4504	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-161	1	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	171.166493338546	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886606	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.6	chr14	+	4606	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-236	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	166.916953527795	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886531	47974021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.60	chr14	+	4370	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-161	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	176.559070180939	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886606	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.61	chr14	+	4687	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-154	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_41	183.663945762989	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886613	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ES.10631.62	chr14	+	4202	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-154	-87	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGTCAGACACTGGA	NA	False	NA	9	True	ATTAAA	-24	NA	47886613	47973649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.63	chr14	+	4754	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-154	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	217.338681140858	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886613	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.65	chr14	+	4180	38	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	-154	114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.406130866429	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886613	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901218_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.66	chr14	+	4260	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-153	114	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	152.220744725066	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886614	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.67	chr14	+	4480	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	179.099449342444	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886647	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.68	chr14	+	4408	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-111	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_38	183.198953731181	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886656	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.69	chr14	+	4164	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-110	114	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.488430792916	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886657	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.7	chr14	+	4421	38	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-230	0	combination_of_known_junctions	FALSE	canonical	3	256	junction_23	141.712210556787	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886537	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.70	chr14	+	4113	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-110	-86	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	188.969502077237	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGTCAGACACTGGAC	NA	False	NA	10	True	ATTAAA	-25	NA	47886657	47973650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.71	chr14	+	4090	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-93	-85	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	196.097705238996	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTCAGACACTGGACA	NA	False	NA	11	True	ATTAAA	-26	NA	47886674	47973651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.72	chr14	+	4162	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	216.002599847751	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886675	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901384_47901735_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.73	chr14	+	4047	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-54	105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	206.832745536191	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCAAAGTGGTATAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	47886713	47973855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957696_47961434_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.74	chr14	+	4775	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-47	416	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	230.854975523305	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCTATTTTAAATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	47886720	47974437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904755_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.75	chr14	+	4325	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-45	114	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	200.109088998976	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886722	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.76	chr14	+	4291	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-33	111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	256.114328718641	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886734	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929932_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.77	chr14	+	4153	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-32	109	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	167.513152162066	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886735	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.78	chr14	+	4285	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	178.144586691016	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886735	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.79	chr14	+	4329	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.321878224553	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886735	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.8	chr14	+	4540	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-224	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	226.768511752446	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886543	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.81	chr14	+	4315	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	191.410175691672	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACTCTGATTGTCGTT	NA	False	NA	22	True	AATAAA	-22	NA	47886745	47974019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.82	chr14	+	4063	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-15	114	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	184.137634074484	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTATAGACAATGTGAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	47886752	47973864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.83	chr14	+	4453	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	201.792020097426	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886753	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949948_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.84	chr14	+	3271	36	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	188.018987317336	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886758	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47901212_47901350_47920872_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.85	chr14	+	3867	37	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-9	111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	183.581423049526	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886758	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.86	chr14	+	4467	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	187.609374765762	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886758	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.87	chr14	+	4627	42	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	239.140584003032	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886759	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973558
ES.10631.88	chr14	+	4327	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	206.899474395009	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886759	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.89	chr14	+	4713	43	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	253.989961993876	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886762	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887417_47887521_47887855_47888029_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.9	chr14	+	4609	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	192.694810516526	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	NA	False	NA	23	True	AATAAA	-23	NA	47886565	47974020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.90	chr14	+	4115	39	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-5	105	combination_of_known_junctions	FALSE	canonical	3	145	junction_35	180.114306580302	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCAAAGTGGTATAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	47886762	47973855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ES.10631.91	chr14	+	4631	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	177.876635621433	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTCACTCTGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	47886762	47974016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47887108_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.92	chr14	+	3926	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	-91	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.321878224553	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTACTTTGTCAGACAC	NA	False	NA	5	True	ATTAAA	-20	NA	47886763	47973645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.93	chr14	+	4477	41	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	198.278030805231	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886763	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886897_47887855_47887988_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.94	chr14	+	2997	28	ISM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	-4	27664	-4	4456	5prime_fragment	FALSE	canonical	3	462	junction_23	103.499879061313	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGACTACTAAAATTCT	NA	False	NA	NA	False	ATTAAA	-45	NA	47886763	47946350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258
ES.10631.95	chr14	+	4292	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	196.955789884349	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886763	47974014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.96	chr14	+	4143	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	109	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	175.748048995823	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGGTATAGACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	47886763	47973859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10631.97	chr14	+	4302	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	111	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	173.452039480659	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTATAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	47886763	47973861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.98	chr14	+	4038	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	-4	-89	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	192.694810516526	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTGTCAGACACTG	NA	False	NA	7	True	ATTAAA	-22	NA	47886763	47973647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ES.10631.99	chr14	+	4143	38	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	169.00240531481	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCACTCTGATTGTCGT	NA	False	NA	21	True	AATAAA	-21	NA	47886763	47974018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ES.10632.1	chr14	-	2418	2	Antisense	novelGene_ENSMUSG00000021843.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATCACCCCTAAGTCA	NA	False	NA	NA	False	AAAACA	-37	NA	47890311	47887827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47890215_47890280
ES.10633.1	chr14	-	3268	1	Antisense	novelGene_ENSMUSG00000021843.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCATTTTTGAATAAGAGA	NA	False	NA	NA	False	NA	NA	NA	47962748	47959480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_47959500_47962700
ES.10634.1	chr14	-	4190	1	NIC	ENSMUSG00000115215.2	novel	736	3	NA	NA	6560	-3474	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	48036216	48032026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_48032000_48036200
ES.10635.1	chr14	+	3217	4	Intergenic	novelGene_8909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTCTCCGTGATTGT	NA	False	NA	NA	False	AATAGA	-12	NA	48093219	48116653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_48093447_48112209_48112413_48113040_48113324_48114149
ES.10636.1	chr14	-	2925	1	Intergenic	novelGene_8910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	48247200	48244275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48244300_48247200
ES.10637.1	chr14	-	702	1	FSM	ENSMUSG00000062081.7	ENSMUST00000180532.2	378	1	-59	-265	-59	265	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGGAGGAGAAGGGAG	NA	False	NA	NA	False	AATAAA	-42	NA	48317268	48316566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_48316600_48317300
ES.10638.1	chr14	+	2003	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-172	4069	-172	-5	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTGGATCTCAACTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	48358107	48494276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.10	chr14	+	5420	4	NNC	ENSMUSG00000021846.10	novel	1320	3	NA	NA	-22	3977	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	25.7725090401036	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	48358356	48421452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48416250_48416352_48416597
ES.10638.11	chr14	+	1850	7	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.4316534061922	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTGGATCTCAACTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	48358361	48494276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48416250_48416352_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.12	chr14	+	2466	10	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.0457281022125	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTGGATCTCAACTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	48358379	48494276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48416250_48416352_48416597_48416734_48477666_48477769_48481266_48481421_48482259_48482604_48487966_48488162_48490033_48490223_48493472
ES.10638.13	chr14	+	5270	5	ISM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	47373	220	-77	-220	3prime_fragment	FALSE	canonical	3	56	junction_3	6.97764286847643	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCTTTAGACTCTTC	NA	False	NA	9	True	ATTAAA	-20	NA	48405652	48498125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.14	chr14	+	1413	2	ISM	ENSMUSG00000021846.10	ENSMUST00000228519.2	1629	5	67151	5	53441	-5	3prime_fragment	FALSE	canonical	3	72	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTGGATCTCAACTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	48489613	48494276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48490223_48493472
ES.10638.15	chr14	+	2959	1	ISM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	135772	1335	57879	862	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTACTTTTGTGGCCCGAA	NA	False	NA	NA	False	NA	NA	NA	48494051	48497010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48494100_48497000
ES.10638.2	chr14	+	5744	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	-64	220	-64	-220	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCTTTAGACTCTTC	NA	False	NA	9	True	ATTAAA	-20	NA	48358215	48498125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.3	chr14	+	5664	6	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	-36	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.4589866255513	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTAAGTTGTCTTTAG	NA	False	NA	2	True	ATTAAA	-13	NA	48358243	48498118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48477666_48477724_48487966_48488162_48490033_48490223_48493472
ES.10638.4	chr14	+	5585	5	FSM	ENSMUSG00000021846.10	ENSMUST00000226828.2	3527	5	-81	-1977	-35	-220	multi-exon	FALSE	canonical	0	0	junction_1	29.5972971738975	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCTTTAGACTCTTC	NA	False	NA	9	True	ATTAAA	-20	NA	48358244	48498125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48358691_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.5	chr14	+	5791	7	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	-8	-218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.4316534061922	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTTAGACTCTTCTT	NA	False	NA	11	True	ATTAAA	-22	NA	48358271	48498127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48416250_48416352_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.6	chr14	+	3378	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	10	2512	10	-315	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGTCTTTTTACTGATA	NA	False	NA	NA	False	NA	NA	NA	48358289	48495833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.7	chr14	+	6311	11	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	-21	-224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.2074494123552	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTTGTCTTTAGACT	NA	False	NA	5	True	ATTAAA	-16	NA	48358304	48498121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48395368_48395546_48396676_48396801_48405653_48405784_48416250_48416352_48416597_48416734_48438025_48438148_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.8	chr14	+	5867	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	31	2	-15	-2	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTATTGGTGCTTTTTT	NA	False	NA	9	True	ATTAAA	-22	NA	48358310	48498343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ES.10638.9	chr14	+	5628	6	NNC	ENSMUSG00000021846.10	novel	5900	6	NA	NA	25	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.4589866255513	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGTTGTCTTTAGAC	NA	False	NA	4	True	ATTAAA	-15	NA	48358350	48498120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493448
ES.10639.1	chr14	-	178	1	Intergenic	novelGene_8911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	48562833	48562655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48562700_48562800
ES.1064.1	chr1	-	172	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTTACAAGAGAATAC	NA	False	NA	NA	False	NA	NA	NA	93588728	93588556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93588600_93588700
ES.10640.1	chr14	+	165	1	Intergenic	novelGene_8912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAATCTTGCCT	NA	False	NA	NA	False	NA	NA	NA	48579069	48579234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_48579100_48579200
ES.10641.1	chr14	-	177	1	Intergenic	novelGene_8913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	48681129	48680952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48681000_48681100
ES.10642.1	chr14	+	2218	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	-177	240	-4	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGATATGTTCTGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	48683576	48685794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48683600_48685800
ES.10642.10	chr14	+	3010	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-13	2488	-13	178	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAATAATAGCTCTTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	48683825	48750425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.11	chr14	+	5223	18	NNC	ENSMUSG00000036339.19	novel	6333	17	NA	NA	1	-811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.8144229731597	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTATTGCCCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	48683839	48760892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48755655_48755744_48757546_48757652_48757792
ES.10642.12	chr14	+	5156	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	1	328	1	-328	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAAGCTTACAATAGAG	NA	False	NA	NA	False	AATAAA	-29	NA	48683839	48752585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.13	chr14	+	2692	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	3	2790	3	-124	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAGTTTTATCATCT	NA	False	NA	NA	False	NA	NA	NA	48683841	48750123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.14	chr14	+	5243	17	NNC	ENSMUSG00000036339.19	novel	5485	16	NA	NA	3	-316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	13.1646721854363	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGAGTTTGTAAATGTC	NA	False	NA	NA	False	AATAAA	-41	NA	48683841	48752597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48746680_48746758_48749359
ES.10642.15	chr14	+	1968	11	ISM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	43	4528	2	608	5prime_fragment	FALSE	canonical	3	30	junction_9	4.62709412050371	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGTGTGCAAATAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	48683851	48734441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748
ES.10642.16	chr14	+	5031	16	FSM	ENSMUSG00000036339.19_ENSMUSG00000115756.2	ENSMUST00000227440.2	2222	16	273	-3082	-1	-796	multi-exon	FALSE	canonical	1	4	junction_15	10.2254584249314	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGTCATCTTTTG	NA	False	NA	NA	False	NA	NA	NA	48683853	48760907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48757792
ES.10642.17	chr14	+	3030	12	FSM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	46	-80	0	80	multi-exon	FALSE	canonical	3	30	junction_9	4.93595344018117	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	48683854	48739049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463
ES.10642.18	chr14	+	1477	10	ISM	ENSMUSG00000036339.19	ENSMUST00000133744.8	2996	12	77	14366	31	4350	5prime_fragment	FALSE	canonical	3	30	junction_9	4.84067131350933	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTGAAAGATTTGGGG	NA	False	NA	NA	False	ATTAAA	-14	NA	48683885	48724603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197
ES.10642.19	chr14	+	5392	15	ISM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	4407	225	-2273	-225	3prime_fragment	FALSE	canonical	3	23	junction_11	6.79135104228841	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTTTGTTTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-1	NA	48688245	48752688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.2	chr14	+	2442	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	-164	3	5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTGTTAAGTTTTCCT	NA	False	NA	NA	False	AATAAA	-43	NA	48683589	48686031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48683600_48686000
ES.10642.20	chr14	+	3457	1	Intergenic	novelGene_8914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATAGTGTTAAATTAAA	189	False	NA	NA	False	AATAAA	-17	NA	48695107	48698564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_48695100_48698600
ES.10642.21	chr14	+	3998	1	NIC	ENSMUSG00000036339.19	novel	2222	16	NA	NA	-8373	98	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	48735069	48739067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_48735100_48739100
ES.10642.22	chr14	+	4938	4	NNC	ENSMUSG00000036339.19	novel	1826	14	NA	NA	-734	-223	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.0277457017791	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTGTTTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-3	NA	48742708	48752690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48742879_48744599_48744654_48746491_48747875_48749359
ES.10642.3	chr14	+	5458	17	FSM	ENSMUSG00000036339.19	ENSMUST00000124720.8	3035	17	20	-2443	8	-223	multi-exon	FALSE	canonical	0	0	junction_3	14.4339822554276	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTGTTTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-3	NA	48683604	48752690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48683793_48688599_48688632_48689362_48689515_48692537_48692768_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.4	chr14	+	1846	8	NNC	ENSMUSG00000036339.19	novel	2996	12	NA	NA	-2	-4234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.5646495037371	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCCAACAGACCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	48683806	48716019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48707885_48708055_48709780_48709959_48711422_48711537_48714971_48715462_48715562
ES.10642.5	chr14	+	4074	10	NNC	ENSMUSG00000036339.19	novel	2996	12	NA	NA	-1	4361	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	13.0988643367881	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGGTTCTTGTATGT	NA	False	NA	NA	False	ATTAAA	-25	NA	48683807	48724614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715462_48715562_48717802_48720706_48720791_48722395_48722511_48724197
ES.10642.6	chr14	+	1398	4	NNC	ENSMUSG00000036339.19	novel	2996	12	NA	NA	11	-1069	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	19.7989898732233	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACAATTTATTCGTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	48683819	48691991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48691018
ES.10642.7	chr14	+	2837	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-18	2666	12	0	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTTGTCCTTCTC	NA	False	NA	NA	False	ATTAAA	-31	NA	48683820	48750247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.8	chr14	+	5278	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	-18	225	12	-225	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTTTGTTTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-1	NA	48683820	48752688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ES.10642.9	chr14	+	1826	9	NNC	ENSMUSG00000036339.19	novel	2996	12	NA	NA	13	1397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.7426116513565	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAACAAAAAACAA	NA	False	NA	NA	False	TATAAA	-25	NA	48683821	48721650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48721147_48721200
ES.10643.1	chr14	-	155	1	Intergenic	novelGene_8915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGACAATAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	48824063	48823908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48823900_48824100
ES.10644.1	chr14	+	177	1	Intergenic	novelGene_8916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48861302	48861479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_48861300_48861500
ES.10645.1	chr14	-	1419	1	Intergenic	novelGene_8917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTACTTATAATAGCCA	NA	False	NA	NA	False	NA	NA	NA	48892980	48891561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48891600_48893000
ES.10646.1	chr14	-	3114	4	NNC	ENSMUSG00000021848.17	novel	723	4	NA	NA	-109	1013	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	16.0485374896143	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGATGGCTAGATCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	48900438	48894120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_48896784_48898755_48898932_48899900_48900117_48900379
ES.10646.2	chr14	-	2209	4	FSM	ENSMUSG00000021848.17	ENSMUST00000118578.9	2144	4	-65	0	-65	0	multi-exon	FALSE	canonical	2	4	junction_3	16.8720676464584	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	-3	True	ATTAAA	-14	NA	48902628	48895135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48902435
ES.10646.3	chr14	-	2244	5	FSM	ENSMUSG00000021848.17	ENSMUST00000152018.8	1033	5	63	-1274	63	0	multi-exon	FALSE	canonical	0	0	junction_3	19.6389281784928	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	-3	True	ATTAAA	-14	NA	48905038	48895135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48904656_48904731_48904884
ES.10646.4	chr14	-	2088	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	-3	True	ATTAAA	-14	NA	48900451	48895135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
ES.10646.7	chr14	-	1924	4	NNC	ENSMUSG00000021848.17	novel	723	4	NA	NA	-99	7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	16.0485374896143	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48900428	48895300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_48896784_48898755_48898932_48899900_48900117_48900379
ES.10646.8	chr14	-	1874	4	NNC	ENSMUSG00000021848.17	novel	2144	4	NA	NA	-73	7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	13.7194104181711	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48900402	48895300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_48896784_48898755_48898908_48899900_48900117_48900379
ES.10646.9	chr14	-	1947	1	NIC	ENSMUSG00000021848.17	novel	2592	6	NA	NA	124	556	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAAAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	48900205	48898258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_48898300_48900200
ES.10647.1	chr14	+	2711	1	Intergenic	novelGene_8918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAATGCCTCTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	48945229	48947940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_48945200_48947900
ES.10648.1	chr14	-	319	1	Intergenic	novelGene_8919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48956064	48955745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48955700_48956100
ES.10648.2	chr14	-	207	1	Intergenic	novelGene_8920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	48956064	48955857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_48955900_48956100
ES.10649.1	chr14	-	2152	1	Intergenic	novelGene_8921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	49037717	49035565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_49035600_49037700
ES.1065.1	chr1	+	4009	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAGGAAGAAAAGCAAAGA	NA	False	NA	NA	False	NA	NA	NA	93595731	93599740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93595700_93599700
ES.10650.1	chr14	+	195	1	Intergenic	novelGene_8922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTACTCAGCCGCTCA	NA	False	NA	NA	False	NA	NA	NA	49226722	49226917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49226700_49226900
ES.10651.1	chr14	+	1027	1	Antisense	novelGene_ENSMUSG00000061244.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	49276365	49277392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_49276400_49277400
ES.10652.1	chr14	+	3216	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	-83	3188	-83	272	multi-exon	TRUE	canonical	3	109	junction_2	12.7487494384703	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTCTTTTTTTTCC	NA	False	NA	34	True	ATTAAA	-19	NA	49303868	49325148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.10	chr14	+	3832	10	NNC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	46.0622230798919	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAAATTTGTGACATA	NA	False	NA	NA	False	NA	NA	NA	49303982	49328335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49326046
ES.10652.11	chr14	+	3988	9	NNC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-5	9	intron_retention	FALSE	canonical	2	3	junction_8	41.2583324917525	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATGCTTTTTCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	49303982	49328264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49326046
ES.10652.12	chr14	+	2824	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	31	659	-4	-659	multi-exon	FALSE	canonical	3	152	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCATCCTGTATTTGT	NA	False	NA	NA	False	CATAAA	-17	NA	49303983	49313491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005
ES.10652.13	chr14	+	5664	3	NNC	ENSMUSG00000036291.7	novel	3514	2	NA	NA	-4	-4366	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCTCACAGGTGTATCC	NA	False	NA	NA	False	NA	NA	NA	49303983	49309784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49307704_49307766_49309142_49309215
ES.10652.14	chr14	+	1114	6	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	0	-783	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	46.8042733091755	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCGCTTTAGACTAGT	NA	False	NA	NA	False	TATAAA	-10	NA	49303987	49324039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.15	chr14	+	5566	7	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	0	8	intron_retention	FALSE	canonical	0	0	junction_1	44.4809572239127	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTATGCTTTTTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	49303987	49328263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.16	chr14	+	2859	7	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	4	266	intron_retention	FALSE	canonical	3	8	junction_2	45.2683357571517	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTTTTTGTCTTTT	NA	False	NA	28	True	AATAAA	-45	NA	49303991	49325142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49311005_49311652_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.17	chr14	+	13438	6	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	4	9	intron_retention	FALSE	canonical	3	117	junction_5	13.3326666499992	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATGCTTTTTCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	49303991	49328264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49311005_49316380_49317692_49317833_49318292_49318379_49318467_49321413_49323701
ES.10652.18	chr14	+	2333	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	41	3947	5	-433	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATGTTCTAGAACTCC	NA	False	NA	NA	False	AATAAA	-14	NA	49303992	49324389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.19	chr14	+	2151	9	NNC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_7	54.4700318982833	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACGGCTTTTGCTAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	49303994	49331688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321407_49323701_49323817_49331289
ES.10652.2	chr14	+	6391	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	-58	-12	-58	12	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATAATAGCCTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	49303893	49328348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.20	chr14	+	2515	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	8	21	-3	-21	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAGGTAAACAACCAAA	NA	False	NA	NA	False	AATAAA	-21	NA	49303995	49324801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.21	chr14	+	2950	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	44	520	-2	-520	multi-exon	FALSE	canonical	3	152	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTTGTATATTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	49303996	49313630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005
ES.10652.22	chr14	+	2012	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	45	1457	-1	-1457	multi-exon	FALSE	canonical	3	152	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATTAGACAGGGAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	49303997	49312693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005
ES.10652.24	chr14	+	2830	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	39	-325	28	271	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49304026	49325147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.25	chr14	+	3009	10	NNC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	29	268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	54.9787837867178	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTTTTGTCTTTTTT	NA	False	NA	30	True	ATTAAA	-15	NA	49304027	49325144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49320730_49320914_49321315_49321413_49323701
ES.10652.26	chr14	+	5293	6	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	29	3	intron_retention	FALSE	canonical	1	1	junction_1	46.8042733091755	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTTCTTATGCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	49304027	49328258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.27	chr14	+	8759	6	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	29	13	intron_retention	FALSE	canonical	3	8	junction_2	49.1349163019537	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAATAGCCTCCTGTAG	NA	False	NA	NA	False	NA	NA	NA	49304027	49328349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49311005_49311652_49317692_49317833_49318292_49318379_49318467_49321413_49323701
ES.10652.28	chr14	+	3766	10	NNC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	29	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.5215405030019	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATGCTTTTTCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	49304027	49328264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49304322_49311005_49311250_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49326046
ES.10652.29	chr14	+	2952	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	76	3293	29	167	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTAAAGATCCTGGGAAC	NA	False	NA	-71	True	TTTAAA	-11	NA	49304027	49325043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.3	chr14	+	6135	7	NIC	ENSMUSG00000036291.7	novel	6321	8	NA	NA	-43	-1	intron_retention	FALSE	canonical	3	8	junction_2	45.2683357571517	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAAATTTGTGACATA	NA	False	NA	NA	False	NA	NA	NA	49303908	49328335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49311005_49311652_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.30	chr14	+	3280	2	NNC	ENSMUSG00000036291.7	novel	936	4	NA	NA	3676	35889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATTAAGGCTGGGGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	49324989	49367580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49328255_49367565
ES.10652.4	chr14	+	2507	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAAATTTGTGACATA	NA	False	NA	NA	False	NA	NA	NA	49303924	49328335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
ES.10652.5	chr14	+	6221	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	-27	127	-27	-46	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTTCATTATTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	49303924	49328209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.6	chr14	+	6042	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	-56	-3442	-20	9	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTATGCTTTTTCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	49303931	49328264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.7	chr14	+	5860	8	FSM	ENSMUSG00000036291.7	ENSMUST00000227608.2	2362	8	-38	-3460	8	0	multi-exon	FALSE	canonical	2	5	junction_2	43.4276315687774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAATTTGTGACATAA	NA	False	NA	NA	False	NA	NA	NA	49303960	49328336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311200_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.8	chr14	+	2848	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	13	3460	12	0	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTCCCTGTCGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	49303964	49324876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10652.9	chr14	+	1794	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	14	4513	13	-999	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATCATAGAATCATAGTA	NA	False	NA	NA	False	NA	NA	NA	49303965	49323823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ES.10653.1	chr14	-	4429	1	ISM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	55976	2159	9115	-2159	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGAATTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	49248134	49243705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_49243700_49248100
ES.10653.10	chr14	-	4409	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	237	8053	-20	1612	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303873	49249599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.11	chr14	-	4512	19	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	19	1612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.8172951472022	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303834	49249599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49258739_49258882_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.12	chr14	-	4278	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-6	1612	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303859	49249599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.13	chr14	-	3865	6	ISM	ENSMUSG00000061244.15	ENSMUST00000161504.8	2582	17	42072	-1611	-790	1611	3prime_fragment	FALSE	canonical	3	148	junction_5	17.5795335546766	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTTTTTTATTTTTT	NA	False	NA	-5	True	AATAAA	-13	NA	49261781	49249600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655
ES.10653.14	chr14	-	4356	17	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	17	1608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	42.5506591458934	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTGTTTTTTTTATTT	NA	False	NA	-8	True	AATAAA	-10	NA	49303836	49249603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49279924_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.15	chr14	-	4266	19	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	15	1362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.8172951472022	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAAATGAAACATCAGAT	NA	False	NA	NA	False	NA	NA	NA	49303838	49249849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49258739_49258882_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.16	chr14	-	4169	19	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	8	1360	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	52.6416079626078	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATCAAATGAAACATCAG	NA	False	NA	NA	False	NA	NA	NA	49303845	49249851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276035_49276076_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.17	chr14	-	4151	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	239	8309	-18	1356	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATATCAAATGAAACA	NA	False	NA	NA	False	NA	NA	NA	49303871	49249855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.19	chr14	-	4068	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-56	1352	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAATATCAAATGA	NA	False	NA	NA	False	NA	NA	NA	49303909	49249859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.2	chr14	-	7190	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	46	4576	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGGGGCAAATAGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	49303807	49246635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.20	chr14	-	8473	1	NIC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-1085	1350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAATATCAAAT	NA	False	NA	NA	False	NA	NA	NA	49258334	49249861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_49249900_49258300
ES.10653.21	chr14	-	4108	17	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	17	1350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.5506591458934	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAATATCAAAT	NA	False	NA	NA	False	NA	NA	NA	49303836	49249861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49279914_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.22	chr14	-	4145	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-11	1350	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	40.9673682278417	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAATATCAAAT	NA	False	NA	NA	False	NA	NA	NA	49303864	49249861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275122_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.25	chr14	-	6465	17	NIC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	51	1318	intron_retention	FALSE	canonical	3	137	junction_14	16.582652833609	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49303802	49249893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49288925_49289754_49289850_49303582
ES.10653.26	chr14	-	3798	17	NIC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	175	1317	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	42.3253304033176	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49303678	49249894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.27	chr14	-	3607	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	175	8917	-82	748	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCTCATAGACCTATC	NA	False	NA	NA	False	AATAAA	-13	NA	49303935	49250463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.28	chr14	-	3394	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	14	748	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCTCATAGACCTATC	NA	False	NA	NA	False	AATAAA	-13	NA	49303839	49250463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.29	chr14	-	3109	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	254	9336	-3	329	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGAAGACTTTTAAGG	NA	False	NA	NA	False	AATAAA	-25	NA	49303856	49250882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.3	chr14	-	4692	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	250	7757	-7	1908	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCAAAATGGTTGTCAG	NA	False	NA	78	True	CATAAA	-18	NA	49303860	49249303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.30	chr14	-	3845	17	NIC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-24	-23	intron_retention	FALSE	canonical	3	137	junction_13	15.3948043183407	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTATTTATCAGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	49303877	49251234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.31	chr14	-	2764	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	244	9691	-13	-26	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTTCTTATTTATCAG	NA	False	NA	NA	False	ATTAAA	-23	NA	49303866	49251237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.32	chr14	-	2750	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	5	-29	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	40.9673682278417	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATATTTCTTATTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	49303848	49251240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275122_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.33	chr14	-	2679	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-49	-30	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATATTTCTTATTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	49303902	49251241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.34	chr14	-	2655	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	229	9815	-28	-150	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTGGTGTCAGAAAA	NA	False	NA	NA	False	TATAAA	-41	NA	49303881	49251361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.35	chr14	-	3123	1	NIC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	1	-28426	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	49303852	49300729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_49300700_49303900
ES.10653.4	chr14	-	4505	18	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	-11	1834	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.1734991580529	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTTATTCTTTGCATT	NA	False	NA	4	True	AATAAA	-20	NA	49303864	49249377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252990_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10653.5	chr14	-	5046	6	NNC	ENSMUSG00000061244.15	novel	2582	17	NA	NA	-30	1833	intron_retention	FALSE	canonical	0	0	junction_5	89.3836674118935	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTATTTATTCTTTGCAT	NA	False	NA	3	True	AATAAA	-19	NA	49260757	49249378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49256980_49258739_49258882_49260655
ES.10653.7	chr14	-	4392	19	NNC	ENSMUSG00000061244.15	novel	12699	18	NA	NA	38	1613	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	52.6416079626078	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTTATTTTTTAT	NA	False	NA	-3	True	AATAAA	-15	NA	49303815	49249598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276035_49276076_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ES.10654.1	chr14	-	1770	3	FSM	ENSMUSG00000115737.2	ENSMUST00000226439.2	1758	3	-22	10	-22	-10	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAGATTGTATTG	NA	False	NA	NA	False	AATAAA	-11	NA	49360191	49349587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49351160_49359878_49360008_49360122
ES.10655.1	chr14	+	4540	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-89	-5	-89	5	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGCATTCTATAAT	NA	False	NA	42	True	AATAAA	-39	NA	49409593	49428347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.10	chr14	+	1451	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	2997	-2	-2	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTGTTGGTACCAG	NA	False	NA	9	True	ATTAAA	-20	NA	49409680	49425345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.11	chr14	+	4624	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	-176	-2	30	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTAGTCAACTGGGC	NA	False	NA	NA	False	AATAAA	-24	NA	49409680	49428518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.12	chr14	+	4440	5	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-2	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	131.409664789162	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGCATTTTTCTTTA	NA	False	NA	16	True	AATAAA	-13	NA	49409680	49428321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410851_49415508_49415633_49418149_49418219_49425006
ES.10655.13	chr14	+	3983	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	465	-2	-465	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGGAGTTTGTCATGT	NA	False	NA	NA	False	AATACA	-18	NA	49409680	49427877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.14	chr14	+	4513	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	125.502191215931	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAAAAACTTGA	NA	False	NA	NA	False	AGTAAA	-6	NA	49409680	49428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410215_49410295_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.15	chr14	+	2685	5	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-2	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.822797724825	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAACTTCCTGCTG	NA	False	NA	-3	True	NA	NA	NA	49409680	49426801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410629_49415508_49415633_49418162_49418219_49425006
ES.10655.16	chr14	+	3154	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-1	-19	intron_retention	FALSE	canonical	3	313	junction_3	7.58653778449403	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGGTGGGATCAT	NA	False	NA	7	True	NA	NA	NA	49409681	49426811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.18	chr14	+	2908	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	7	1531	7	-19	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGGTGGGATCAT	NA	False	NA	7	True	NA	NA	NA	49409689	49426811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.19	chr14	+	2143	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	144.652072996629	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTATAGTTCCTTATTT	NA	False	NA	23	True	NA	NA	NA	49409692	49426827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49409835_49415508_49415633_49418162_49418219_49425006
ES.10655.2	chr14	+	3061	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-12	1397	-12	115	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTTTTGGTCAAACTT	NA	False	NA	NA	False	NA	NA	NA	49409670	49426945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.20	chr14	+	3265	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	10	1171	10	341	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAATTCAAAAGTTTTG	NA	False	NA	NA	False	AATAGA	-13	NA	49409692	49427171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.21	chr14	+	4354	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	125.502191215931	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAGCTGTGTGCATTC	NA	False	NA	36	True	AATAAA	-33	NA	49409692	49428341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410215_49410295_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.22	chr14	+	4232	5	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.305693042015	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAAAAACTTGA	NA	False	NA	NA	False	AGTAAA	-6	NA	49409694	49428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409731_49410316_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.23	chr14	+	3653	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	144.652072996629	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACAGCTGTGTGCATT	NA	False	NA	35	True	AATAAA	-32	NA	49409695	49428340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49409835_49415508_49415633_49418162_49418219_49425006
ES.10655.24	chr14	+	10068	3	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	25	-29	intron_retention	FALSE	canonical	3	239	junction_1	37	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAACTTCCTGCTG	NA	False	NA	-3	True	NA	NA	NA	49409707	49426801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49409835_49410072_49418219_49425006
ES.10655.25	chr14	+	1925	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	26	2495	26	136	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGGACAGTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	49409708	49425847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.26	chr14	+	2849	5	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	41	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.305693042015	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAAAATAAAAACTTCC	NA	False	NA	-8	True	NA	NA	NA	49409723	49426796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410082_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.27	chr14	+	2604	4	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-55	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.715376793374	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAACTTCCTGCTG	NA	False	NA	-3	True	NA	NA	NA	49409999	49426801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49410629_49415508_49415633_49418162_49418219_49425006
ES.10655.28	chr14	+	7280	3	FSM	ENSMUSG00000036282.16	ENSMUST00000138478.2	2157	3	-5152	29	149	-29	multi-exon	FALSE	canonical	3	313	junction_2	8.5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAACTTCCTGCTG	NA	False	NA	-3	True	NA	NA	NA	49410203	49426801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49415633_49418162_49418219_49425006
ES.10655.29	chr14	+	9004	2	FSM	ENSMUSG00000036282.16	ENSMUST00000134984.2	2944	2	-3448	-2612	1770	-19	multi-exon	FALSE	canonical	3	313	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCATTTTTCTTTAAG	NA	False	NA	18	True	AATAAA	-15	NA	49412531	49428323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49418219_49425006
ES.10655.3	chr14	+	4691	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	313	junction_3	7.58653778449403	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGCTGTGTGCATTCT	NA	False	NA	37	True	AATAAA	-34	NA	49409675	49428342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.30	chr14	+	3471	4	NNC	ENSMUSG00000036282.16	novel	4464	4	NA	NA	191	4132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	155.328326099552	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATTGTTCTAACCCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	49415546	49432620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49415633_49418162_49418219_49429080_49431135_49431345
ES.10655.31	chr14	+	2711	1	Genic_Genomic	ENSMUSG00000036282.16	novel	NA	NA	NA	NA	10336	538	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCCAAAAAGCACTA	NA	False	NA	NA	False	TATAAA	-8	NA	49426315	49429026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_49426300_49429000
ES.10655.32	chr14	+	4088	2	NNC	ENSMUSG00000036282.16	novel	4464	4	NA	NA	12285	4075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGATTGTATGTTG	NA	False	NA	NA	False	NA	NA	NA	49428264	49432563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49431135_49431345
ES.10655.4	chr14	+	6620	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-6	141	intron_retention	FALSE	canonical	3	239	junction_1	39.5052739095259	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACAGTTTTTCTAGGT	NA	False	NA	NA	False	AATAAA	-20	NA	49409676	49425852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_49409835_49410072_49415633_49418162_49418219_49425006
ES.10655.5	chr14	+	4218	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-6	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.67249289023	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCATTTTTCTTTAAG	NA	False	NA	18	True	AATAAA	-15	NA	49409676	49428323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409701_49410072_49410215_49410295_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.6	chr14	+	2952	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-6	93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	125.502191215931	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTGCTGACCATTT	NA	False	NA	119	True	ATTAAA	-24	NA	49409676	49426923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410215_49410295_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.7	chr14	+	4346	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	125.502191215931	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGCTGTGTGCATTCT	NA	False	NA	37	True	AATAAA	-34	NA	49409676	49428342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410190_49410295_49410851_49415508_49415633_49418162_49418219_49425006
ES.10655.8	chr14	+	2987	6	NNC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	-6	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.244830129957	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGGTGGGATCAT	NA	False	NA	7	True	NA	NA	NA	49409676	49426811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_49409835_49410072_49410851_49410960_49411027_49415508_49415633_49418162_49418219_49425006
ES.10655.9	chr14	+	2783	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	-2	1665	-2	-153	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTGCGCTTTTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	49409680	49426677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ES.10656.1	chr14	+	227	1	Intergenic	novelGene_8923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGCAGGGAGT	NA	False	NA	NA	False	NA	NA	NA	49473854	49474081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49473900_49474100
ES.10657.1	chr14	-	617	3	NNC	ENSMUSG00000021852.15	novel	1931	8	NA	NA	-2137	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTTTGTTTTGTTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	49538867	49535976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49536418_49538353_49538444_49538781
ES.10658.1	chr14	-	188	1	Intergenic	novelGene_8924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGATTAGTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	49612094	49611906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_49611900_49612100
ES.10659.1	chr14	+	2492	1	Intergenic	novelGene_8925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTGTAAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	49839691	49842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49839700_49842200
ES.10659.11	chr14	+	2092	2	Intergenic	novelGene_8935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTATTGTAAAGT	NA	False	NA	NA	False	NA	NA	NA	49839816	49842177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49840096_49840364
ES.10659.12	chr14	+	437	3	Intergenic	novelGene_8936	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	18	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAAATTGCCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	49839976	49846580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49840055_49845546_49845696_49846370
ES.10659.2	chr14	+	93	1	Intergenic	novelGene_8926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	49839736	49839829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49839700_49839800
ES.10659.3	chr14	+	5398	2	Intergenic	novelGene_8927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	49839749	49846586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49843313_49844751
ES.10659.4	chr14	+	6792	1	Intergenic	novelGene_8929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	49839797	49846589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49839800_49846600
ES.10659.5	chr14	+	5661	2	Intergenic	novelGene_8931	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTTAGCTCCGTTTCT	NA	False	NA	NA	False	NA	NA	NA	49839801	49846588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49843021_49844146
ES.10659.6	chr14	+	5325	2	Intergenic	novelGene_8930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49839801	49846584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49843317_49844774
ES.10659.7	chr14	+	6093	2	Intergenic	novelGene_8934	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	49839815	49846583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49845696_49846370
ES.10659.8	chr14	+	2661	1	Intergenic	novelGene_8933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACATGTAACTCTTAA	NA	False	NA	NA	False	NA	NA	NA	49839815	49842476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49839800_49842500
ES.10659.9	chr14	+	2209	2	Intergenic	novelGene_8932	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	49839815	49842170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_49840068_49840213
ES.1066.1	chr1	+	4619	1	Genic_Genomic	ENSMUSG00000026278.15	novel	NA	NA	NA	NA	-187	-3979	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCCCTAAGTCAGAGA	NA	False	NA	NA	False	NA	NA	NA	93613194	93617813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_93613200_93617800
ES.1066.2	chr1	+	1656	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	-185	-3	-185	3	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTACTCTGCTTTC	NA	False	NA	9	True	AATAAA	-19	NA	93613196	93623489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
ES.1066.3	chr1	+	2109	4	NIC	ENSMUSG00000026278.15	novel	1468	5	NA	NA	-80	-2	intron_retention	FALSE	canonical	3	47	junction_2	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAGACTCTACTCTG	NA	False	NA	4	True	AATAAA	-14	NA	93613301	93623484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93614392_93616878_93617008_93621781_93621946_93622758
ES.10660.1	chr14	-	2893	1	Intergenic	novelGene_8928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAGGGGGAGGGGACC	NA	False	NA	NA	False	NA	NA	NA	49842681	49839788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_49839800_49842700
ES.10661.1	chr14	-	5432	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	0	3399	0	2317	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGGATGTTGGAAGAC	NA	False	NA	NA	False	NA	NA	NA	50020840	49916807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.10	chr14	-	6560	1	Intergenic	novelGene_8937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50005822	49999262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_49999300_50005800
ES.10661.2	chr14	-	4566	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	46	4219	34	1497	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGACTAAAGTCGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	50020794	49917627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.3	chr14	-	3176	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	-57	5712	-57	4	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCTTGCTTTCTTAAC	NA	False	NA	NA	False	CATAAA	-14	NA	50020897	49919120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.4	chr14	-	2535	7	ISM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	9257	6067	9245	-351	3prime_fragment	FALSE	canonical	3	15	junction_3	7.92499561864583	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50011583	49919475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318
ES.10661.6	chr14	-	2515	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	14	6302	2	-586	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTATCTCACCACCTT	NA	False	NA	NA	False	AATAAA	-12	NA	50020826	49919710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.7	chr14	-	3764	6	NNC	ENSMUSG00000036242.16	novel	8831	8	NA	NA	-1	-13496	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	12.2245654319489	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAATAATAAGTATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	50020829	49979841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49981418_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.8	chr14	-	2389	7	NNC	ENSMUSG00000036242.16	novel	8831	8	NA	NA	0	-14737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.9266726217049	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTGTTCACCTTGCC	NA	False	NA	NA	False	AATAAA	-17	NA	50020840	49981082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_49981229_49981373_49981418_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10661.9	chr14	-	3576	5	ISM	ENSMUSG00000036242.16	ENSMUST00000118129.2	3100	8	-5	68367	-5	-21146	5prime_fragment	FALSE	canonical	3	28	junction_3	3.57071421427143	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGATTTGTGAAC	NA	False	NA	NA	False	AATAAA	-11	NA	50020833	49987491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ES.10662.1	chr14	-	148	1	Intergenic	novelGene_8938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTATAAAAAATAAATAA	NA	False	NA	NA	False	AATAAA	-13	NA	50208972	50208824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_50208800_50209000
ES.10663.1	chr14	+	209	1	Intergenic	novelGene_8939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGATTTCAAATAACTT	NA	False	NA	NA	False	NA	NA	NA	50221865	50222074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_50221900_50222100
ES.10664.1	chr14	+	1765	1	FSM	ENSMUSG00000102189.2	ENSMUST00000193092.2	3031	1	86	1180	86	-1180	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATGCATAGAGCATTC	NA	False	NA	NA	False	NA	NA	NA	50298902	50300667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_50298900_50300700
ES.10664.2	chr14	+	5500	1	FSM	ENSMUSG00000102189.2	ENSMUST00000193092.2	3031	1	171	-2640	171	2640	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTCTTTATATTGGC	NA	False	NA	NA	False	NA	NA	NA	50298987	50304487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_50299000_50304500
ES.10664.3	chr14	+	4851	1	FSM	ENSMUSG00000102189.2	ENSMUST00000193092.2	3031	1	2302	-4122	2302	4122	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCTGTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	50301118	50305969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_50301100_50306000
ES.10665.1	chr14	+	176	1	Intergenic	novelGene_8940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGCTTGGCT	2496	False	NA	NA	False	NA	NA	NA	51011517	51011693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51011500_51011700
ES.10666.1	chr14	-	1864	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	-16	-6	-16	6	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTCTCTTTATTGTC	NA	False	NA	0	True	ATTAAA	-27	NA	51022992	51002865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.10	chr14	-	1720	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-1	-11	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	273.975820100972	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022957	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.11	chr14	-	4030	8	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	0	-11	intron_retention	FALSE	canonical	3	810	junction_5	38.3283344862492	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022952	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51015426_51018931_51019065_51022894
ES.10666.12	chr14	-	1810	10	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	4	-11	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	261.669049293234	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022972	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004728_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.14	chr14	-	5625	8	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-1	-11	intron_retention	FALSE	canonical	2	6	junction_2	294.515929370656	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022951	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004728_51009572_51009788_51009930_51010078_51010733_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.15	chr14	-	6007	7	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	4	-11	intron_retention	FALSE	canonical	3	816	junction_3	37.9945171483115	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022972	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51015426_51018931_51019065_51022894
ES.10666.16	chr14	-	1487	10	NNC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	4	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	262.552757778859	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022972	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51003250_51004709_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.17	chr14	-	2130	9	NNC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-1	-11	intron_retention	FALSE	canonical	2	6	junction_2	359.425561660547	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	False	NA	-17	True	ATTAAA	-10	NA	51022951	51002882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51003480_51004599_51004728_51009572_51009788_51009930_51010078_51010733_51010788_51012747_51012840_51014718_51015426_51018931_51019065_51022894
ES.10666.18	chr14	-	3177	3	FSM	ENSMUSG00000006288.9	ENSMUST00000227934.2	2058	3	-22	-1097	4	447	multi-exon	FALSE	canonical	3	834	junction_2	1.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAGTAAAATAATACTTG	NA	False	NA	NA	False	AAAACA	-28	NA	51022972	51012459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51015426_51018931_51019065_51022894
ES.10666.19	chr14	-	2814	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-20	-428	4	428	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCAAAACCCAAAAAAAAC	NA	False	NA	NA	False	AAAACA	-9	NA	51022972	51012478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.2	chr14	-	6335	7	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	5	6	intron_retention	FALSE	canonical	3	816	junction_3	36.2096518747266	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTCTCTTTATTGTC	NA	False	NA	0	True	ATTAAA	-27	NA	51022971	51002865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.20	chr14	-	2709	4	NNC	ENSMUSG00000006288.9	novel	2366	4	NA	NA	1	408	intron_retention	FALSE	canonical	2	6	junction_1	391.031968002617	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	51022955	51012498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51014870_51015281_51015426_51018931_51019065_51022894
ES.10666.21	chr14	-	2382	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	-19	3	5	-3	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTCCGAGAGCTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	51022971	51012909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.4	chr14	-	1848	10	NNC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	268.066925492889	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTCTGTCTCTTTATTG	NA	False	NA	-2	True	ATTAAA	-25	NA	51022953	51002867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014693_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.5	chr14	-	1707	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	358.726371173071	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATAGTTCTGTCTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	51022951	51002872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004728_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.6	chr14	-	1777	9	NNC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	364.856735582612	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATAGTTCTGTCTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	51022972	51002872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015181_51015426_51018931_51019065_51022894
ES.10666.7	chr14	-	5668	8	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	4	-6	intron_retention	FALSE	canonical	3	816	junction_3	35.5917899269492	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCCTATAGTTCTGT	NA	False	NA	-12	True	ATTAAA	-15	NA	51022972	51002877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.8	chr14	-	3781	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	788	junction_5	39.3253655418484	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTACCCTATAGTTCTG	NA	False	NA	-13	True	ATTAAA	-14	NA	51022965	51002878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ES.10666.9	chr14	-	2596	2	ISM	ENSMUSG00000006288.9	ENSMUST00000227751.2	497	3	3168	-422	3168	-8	3prime_fragment	FALSE	canonical	3	913	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTACCCTATAGTTCT	NA	False	NA	-14	True	ATTAAA	-13	NA	51006595	51002879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51003480_51004599
ES.10667.1	chr14	+	201	1	Intergenic	novelGene_8941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATTATGTGATGACGGA	NA	False	NA	NA	False	NA	NA	NA	51028757	51028958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51028800_51029000
ES.10668.1	chr14	+	1785	1	Intergenic	novelGene_8942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	51033728	51035513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51033700_51035500
ES.10669.1	chr14	-	1500	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	8	1	8	-1	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8884	False	NA	0	True	AATAAA	-19	NA	51033177	51026705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
ES.10669.10	chr14	-	3243	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	35	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.5164091102855	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCTTTTTTCTTTTC	8911	False	NA	-7	True	AATAAA	-12	NA	51033150	51026712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51027470_51027592_51028245_51028304_51029764_51031014_51031332_51033092
ES.10669.11	chr14	-	5971	3	ISM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	-2710	9	-2710	-9	intron_retention	FALSE	canonical	3	174	junction_1	20	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTCTTTTTTCTTTT	6166	False	NA	-8	True	AATAAA	-11	NA	51035895	51026713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51027470_51029429_51029764_51031014
ES.10669.12	chr14	-	4697	3	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	398	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTATTTGTTGATTT	9274	False	NA	-27	True	NA	NA	NA	51032787	51026767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51028233_51028304_51029764_51031014
ES.10669.13	chr14	-	1138	2	Intergenic	novelGene_8943	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTATGAGTTGTTC	2976	False	NA	-2	True	AATAAA	-14	NA	51039085	51035572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51036183_51038557
ES.10669.14	chr14	-	877	1	Intergenic	novelGene_8944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGTATGAGTTGTT	5611	False	NA	-3	True	AATAAA	-13	NA	51036450	51035573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51035600_51036400
ES.10669.2	chr14	-	4259	2	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	2161	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8342	False	NA	0	True	AATAAA	-19	NA	51031024	51026705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51028245_51028304
ES.10669.3	chr14	-	1560	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTTCTTTTTGG	8894	False	NA	0	True	AATAAA	-19	NA	51033167	51026705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
ES.10669.4	chr14	-	1868	2	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	4545	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	NA	False	NA	-1	True	AATAAA	-18	NA	51028640	51026706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51028239_51028304
ES.10669.5	chr14	-	3374	4	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.0720763859051	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8912	False	NA	-1	True	AATAAA	-18	NA	51033149	51026706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51028248_51028304_51029764_51031014_51031332_51033092
ES.10669.6	chr14	-	1160	3	NIC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	30	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	87	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCTTTTCTTTTTG	8906	False	NA	-1	True	AATAAA	-18	NA	51033155	51026706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51027470_51029429_51029764_51033092
ES.10669.7	chr14	-	5100	4	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	-1766	-6	intron_retention	FALSE	canonical	3	30	junction_2	83.2239281830786	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTCTT	7110	False	NA	-5	True	AATAAA	-14	NA	51034951	51026710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014
ES.10669.8	chr14	-	1536	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	90.8745701502901	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTCTT	8912	False	NA	-5	True	AATAAA	-14	NA	51033149	51026710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51027470_51029429_51029764_51031014_51031332_51032164_51032234_51033092
ES.10669.9	chr14	-	3368	4	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.0720763859051	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCTTTTTTCTTTTCT	8907	False	NA	-6	True	AATAAA	-13	NA	51033154	51026711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51028242_51028304_51029764_51031014_51031332_51033092
ES.1067.1	chr1	+	157	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	93657864	93658021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93657900_93658000
ES.10670.1	chr14	-	138	1	Intergenic	novelGene_8945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	6563	False	NA	NA	False	NA	NA	NA	51044105	51043967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51044000_51044100
ES.10671.1	chr14	+	2225	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	-51	-1	-30	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045351	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.10	chr14	+	3636	13	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	708	junction_5	47.7080240164645	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.11	chr14	+	5835	13	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_4	227.48748439322	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51050545_51050590_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51058034_51058251_51058377_51058491
ES.10671.12	chr14	+	3208	11	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	40.0426023130366	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51058377_51058491
ES.10671.14	chr14	+	4140	13	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	39.4443172924398	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.16	chr14	+	3607	12	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	36.9064038430744	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51058034_51058251_51058377_51058491
ES.10671.17	chr14	+	2261	15	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_1	203.259811621501	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.19	chr14	+	2331	15	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_7	276.466184225862	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054650_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.2	chr14	+	1837	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	62	-5	-22	5	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTGGGTTTTACTTC	NA	False	NA	NA	False	AATAAA	-21	NA	51045359	51058763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.20	chr14	+	4851	15	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	692	junction_4	51.8055626987162	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045382	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.21	chr14	+	3839	12	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	2	-2	intron_retention	FALSE	canonical	3	749	junction_2	38.1824675269459	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTGGCTTCTTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	51045384	51058755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.22	chr14	+	4454	11	NNC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_9	246.09022735574	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTCTTTGGCTTCTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	51045384	51058752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51056731_51056810_51057499_51057934_51058034_51058255_51058377_51058491
ES.10671.23	chr14	+	3169	13	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	749	junction_2	38.3480949838305	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045384	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.24	chr14	+	1492	13	NNC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	224.224713674078	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTGGCTTCTTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	51045384	51058755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048019_51053732_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.25	chr14	+	1847	16	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	271.206981227745	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045385	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054581_51054736_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.26	chr14	+	5522	13	NNC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_2	226.797312226872	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGCTTCTTTGGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	51045385	51058756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047819_51048028_51049232_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.27	chr14	+	6922	8	NNC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	6	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	288.876076813401	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTGGCTTCTTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	51045388	51058755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51053180_51055287_51056946_51057117_51057246_51057398_51057499_51057934
ES.10671.28	chr14	+	1119	1	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	8	-1518	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51045390	51046509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045400_51046500
ES.10671.29	chr14	+	1792	15	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	279.284143218087	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045391	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.3	chr14	+	1884	16	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_8	267.411459905683	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045364	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054650_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.30	chr14	+	1723	15	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	2126	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	211.800649919028	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51047528	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054555_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.32	chr14	+	5813	5	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	-223	0	intron_retention	FALSE	canonical	3	766	junction_4	37.1643310177918	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51052103	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934
ES.10671.33	chr14	+	2020	6	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	-648	0	intron_retention	FALSE	canonical	3	766	junction_3	35.653891793183	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	2165	False	NA	NA	False	AATAAA	-15	NA	51055716	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51056731_51056810_51056946_51057117_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.4	chr14	+	2414	14	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	-11	0	intron_retention	FALSE	canonical	3	749	junction_2	38.1001483169705	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045370	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.5	chr14	+	1910	16	NNC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	205.600216169363	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045371	51058757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052706_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.6	chr14	+	4919	10	NIC	ENSMUSG00000036023.7	novel	2173	15	NA	NA	-2	6	intron_retention	FALSE	canonical	3	749	junction_2	41.1366287172663	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTGGGTTTTACTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	51045379	51058764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51056731_51056810_51056946_51057117_51057246_51057398
ES.10671.7	chr14	+	1800	16	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	203.499997269997	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTGGCTTCTTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	51045379	51058755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51045445_51047530_51047672_51047956_51048019_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.8	chr14	+	1801	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	194.893064696173	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045379	51058758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052413_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ES.10671.9	chr14	+	2243	15	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	692	junction_5	53.3932274234652	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTGGCTTCTTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	51045381	51058755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51058034_51058251_51058377_51058491
ES.10672.1	chr14	-	158	1	Intergenic	novelGene_8946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGATAAATAAATCTT	4690	False	NA	NA	False	NA	NA	NA	51056188	51056030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51056000_51056200
ES.10673.1	chr14	+	174	1	Intergenic	novelGene_8947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	51065812	51065986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51065800_51066000
ES.10674.1	chr14	+	3220	2	FSM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	-11	-696	1	696	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCAGCTCTTAGTTT	2373	False	NA	NA	False	GATAAA	-10	NA	51107821	51117156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51108014_51114128
ES.10674.2	chr14	+	478	3	NNC	ENSMUSG00000097431.3	novel	971	4	NA	NA	2	-134	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGATGGAGGCAATTTC	2374	False	NA	NA	False	NA	NA	NA	51107822	51110157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51108014_51109207_51109284_51109946
ES.10674.3	chr14	+	632	3	NNC	ENSMUSG00000097431.3	novel	971	4	NA	NA	4	22	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGTAACTTTTTTGT	2376	False	NA	NA	False	NA	NA	NA	51107824	51110313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51108014_51109207_51109284_51109946
ES.10674.4	chr14	+	179	1	ISM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	6972	1477	6964	202	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGTAACATGAAATA	344	False	NA	NA	False	NA	NA	NA	51114804	51114983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51114800_51115000
ES.10675.1	chr14	-	8118	54	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	11.0773840398467	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATGCCCGATTGTGTTC	NA	False	NA	-4	True	TATAAA	-24	NA	51107768	51061515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51103406_51103542_51104145_51104326_51105451_51106043_51107496
ES.10675.10	chr14	-	3872	26	NIC	ENSMUSG00000006281.9	novel	5690	42	NA	NA	-5517	2	intron_retention	FALSE	canonical	2	9	junction_24	10.7261176573819	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGTATGCCCGATTGT	NA	False	NA	-8	True	TATAAA	-20	NA	51079376	51061519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51061748_51061961_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321
ES.10675.13	chr14	-	6440	46	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	-1569	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	10.8881178865363	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGAGTGTATGCCCGA	348	False	NA	-12	True	TATAAA	-16	NA	51093178	51061523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084141_51084289_51084373_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046
ES.10675.15	chr14	-	3362	8	NIC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	29	junction_5	7.85064666516234	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTAGAGTGTATGCCC	NA	False	NA	-14	True	TATAAA	-14	NA	51067555	51061525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51066487_51066624_51066762_51067119_51067250_51067328
ES.10675.17	chr14	-	7379	53	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	4550	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_51	10.9662439293114	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTAGAGTGTATGCC	1953	False	NA	-15	True	TATAAA	-13	NA	51103467	51061526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51101243_51101456_51103406
ES.10675.2	chr14	-	8154	55	FSM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	15	2	15	-2	multi-exon	FALSE	canonical	2	4	junction_54	10.7386492216491	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATGCCCGATTGTGT	NA	False	NA	-6	True	TATAAA	-22	NA	51108002	51061517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51103406_51103542_51104145_51104326_51105451_51106043_51107869
ES.10675.4	chr14	-	1462	10	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.1141728961781	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51067523	51061518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067226_51067328
ES.10675.5	chr14	-	4654	9	NIC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	-1560	-3	intron_retention	FALSE	canonical	3	25	junction_8	8.78830899547803	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51069088	51061518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51066487_51066624_51066762_51067119_51067406_51067586
ES.10675.6	chr14	-	1514	10	NNC	ENSMUSG00000006281.9	novel	5690	42	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5646599662505	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTATGCCCGATTGTG	NA	False	NA	-7	True	TATAAA	-21	NA	51067523	51061518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062095_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328
ES.10675.7	chr14	-	6466	47	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	-1818	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.8060754458149	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGTATGCCCGATTGT	99	False	NA	-8	True	TATAAA	-20	NA	51093427	51061519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064364_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51093386
ES.10675.9	chr14	-	8344	55	NNC	ENSMUSG00000006281.9	novel	8171	55	NA	NA	192	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_54	10.8442806352736	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGTATGCCCGATTGT	NA	False	NA	-8	True	TATAAA	-20	NA	51107825	51061519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51103406_51103542_51104145_51104326_51105451_51106043_51107500
ES.10676.1	chr14	+	4384	1	Genic_Genomic	ENSMUSG00000097431.3	novel	NA	NA	NA	NA	10036	4200	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTTTGGTCTGTGGT	1277	False	NA	NA	False	NA	NA	NA	51117876	51122260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_51117900_51122300
ES.10677.1	chr14	-	177	1	Intergenic	novelGene_8948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATTAATTAATTAA	4427	False	NA	NA	False	NA	NA	NA	51142357	51142180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51142200_51142400
ES.10678.1	chr14	+	1259	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	-13	-7	-13	7	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCCCTTTGTGAA	166	False	NA	21	True	AATAAA	-22	NA	51162411	51164603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ES.10678.10	chr14	+	1869	3	NIC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	5	-3	intron_retention	FALSE	canonical	3	716	junction_1	252	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTGGCTTTCTTTGTC	194	False	NA	11	True	AATAAA	-12	NA	51162439	51164593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51162487_51162669_51163811_51163912
ES.10678.12	chr14	+	1216	5	NNC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	468.227241838832	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	195	False	NA	13	True	AATAAA	-14	NA	51162440	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51162487_51162669_51162782_51162979_51163162_51163617_51163811_51163912
ES.10678.14	chr14	+	1765	3	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	31	1	21	-1	intron_retention	FALSE	canonical	3	716	junction_1	222	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	210	False	NA	13	True	AATAAA	-14	NA	51162455	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51162487_51162669_51162782_51162973
ES.10678.15	chr14	+	2140	1	NIC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	21	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	210	False	NA	13	True	AATAAA	-14	NA	51162455	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51162500_51164600
ES.10678.16	chr14	+	1392	4	FSM	ENSMUSG00000035960.15	ENSMUST00000154288.3	935	4	22	-479	22	2	multi-exon	FALSE	canonical	3	1054	junction_2	68.6310587286997	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTTCTTTGTCCCTTT	211	False	NA	16	True	AATAAA	-17	NA	51162456	51164598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
ES.10678.3	chr14	+	1163	5	NNC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	451.564156571356	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTGGCTTTCTTTGTC	169	False	NA	11	True	AATAAA	-12	NA	51162414	51164593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163728_51163912
ES.10678.4	chr14	+	1445	4	NIC	ENSMUSG00000035960.15	novel	655	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	124	junction_1	482.317553300958	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	169	False	NA	13	True	AATAAA	-14	NA	51162414	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51162492_51162669_51163162_51163617_51163811_51163912
ES.10678.5	chr14	+	1397	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	0	-158	0	158	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTGCAACTGGAAGTAA	179	False	NA	NA	False	NA	NA	NA	51162424	51164754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ES.10678.6	chr14	+	1516	3	ISM	ENSMUSG00000035960.15	ENSMUST00000128395.2	1036	4	-310	1	-3	-1	intron_retention	FALSE	canonical	3	1054	junction_2	53	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	186	False	NA	13	True	AATAAA	-14	NA	51162431	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51162782_51162973_51163162_51163617
ES.10678.7	chr14	+	1969	2	ISM	ENSMUSG00000035960.15	ENSMUST00000128395.2	1036	4	-307	1	0	-1	intron_retention	FALSE	canonical	3	1160	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	189	False	NA	13	True	AATAAA	-14	NA	51162434	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51162782_51162973
ES.10678.9	chr14	+	1035	4	NIC	ENSMUSG00000035960.15	novel	1239	5	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	499.703912332093	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTTTCTTTGTCCC	194	False	NA	13	True	AATAAA	-14	NA	51162439	51164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51162487_51162669_51162782_51163617_51163811_51163912
ES.10679.1	chr14	-	5411	6	ISM	ENSMUSG00000006289.15	ENSMUST00000160890.8	1812	9	3939	-1130	-3559	-962	intron_retention	FALSE	canonical	3	624	junction_4	15.8113883008419	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATCATCAAGTTTCGC	NA	False	NA	NA	False	ATTAAA	-12	NA	51158390	51152012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154961_51155292
ES.10679.10	chr14	-	1795	9	NIC	ENSMUSG00000006289.15	novel	1812	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	62	junction_7	187.571319769308	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162340	51153142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.11	chr14	-	1179	10	NIC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	240.470577754186	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162312	51153142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.12	chr14	-	1165	10	NIC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	242.573598351684	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTAGGTTGTGTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	51162286	51153143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.13	chr14	-	2353	16	Fusion	ENSMUSG00000035953.15_ENSMUSG00000006289.15	novel	3388	11	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_9	247.188942579019	748	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTAGGTTGTGTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	51168312	51153143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_51153356_51153608_51153708_51153798_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51165193_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.14	chr14	-	1419	10	NIC	ENSMUSG00000006289.15	novel	1308	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	62	junction_8	179.925155907658	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTAGGTTGTGTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	51162331	51153143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.15	chr14	-	3531	8	NNC	ENSMUSG00000006289.15	novel	1812	9	NA	NA	-7	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	220.249116841334	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTAGGTTGTGTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	51162307	51153144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154961_51155292_51156009_51156059_51157507_51162120
ES.10679.16	chr14	-	1031	2	NNC	ENSMUSG00000006289.15	novel	2004	12	NA	NA	-7	-3405	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTTTGTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	51162307	51157955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51158800_51162120
ES.10679.17	chr14	-	173	1	Intergenic	novelGene_8949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAGAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	51161036	51160863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51160900_51161000
ES.10679.18	chr14	-	4500	7	FSM	ENSMUSG00000006289.15_ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-37	-1708	-30	1708	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCGGTTGTATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	51168343	51161816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.19	chr14	-	2672	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	65	18	16	-18	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTTGTATGTGAG	NA	False	NA	NA	False	NA	NA	NA	51168241	51163542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.2	chr14	-	1574	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	42	1772	-8	316	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATGTACTACTACTATA	NA	False	NA	NA	False	AGTAAA	-21	NA	51162308	51152822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.20	chr14	-	2680	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	14	-1100	-4	-47	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAAGGCATTCGAGCA	NA	False	NA	NA	False	ATTAAA	-22	NA	51168299	51163571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.21	chr14	-	4134	2	NIC	ENSMUSG00000035953.15	novel	3232	3	NA	NA	1	-338	intron_retention	FALSE	canonical	3	258	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAGAGTTAACTGAAGA	NA	False	NA	NA	False	AATAAA	-38	NA	51168305	51163862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51167782_51168090
ES.10679.22	chr14	-	2448	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-44	351	-37	-351	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCTAAGAAAAAGTAGTAG	NA	False	NA	NA	False	AATAAA	-25	NA	51168350	51163875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.23	chr14	-	2448	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	-64	-790	-64	-357	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGTCTAAGAAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	51168377	51163881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.24	chr14	-	3278	5	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	9	-357	intron_retention	FALSE	canonical	3	258	junction_4	234.118025790412	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGTCTAAGAAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	51168281	51163881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.25	chr14	-	3675	3	FSM	ENSMUSG00000035953.15	ENSMUST00000163043.2	735	3	-30	-2910	3	-357	multi-exon	FALSE	canonical	3	698	junction_2	41.5	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGTCTAAGAAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	51168287	51163881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51167148_51167590_51167782_51168069
ES.10679.26	chr14	-	1695	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-82	1142	-75	5	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTTAACAACTTTTGTG	NA	False	NA	-4	True	AATAAA	-23	NA	51168388	51164666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.27	chr14	-	2117	4	NIC	ENSMUSG00000035953.15	novel	1465	6	NA	NA	-3	4	intron_retention	FALSE	canonical	3	698	junction_3	67.7692162170013	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTAACAACTTTTGT	NA	False	NA	-5	True	AATAAA	-22	NA	51168298	51164667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51167148_51167590_51167782_51168069
ES.10679.28	chr14	-	1780	6	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-18	4	intron_retention	FALSE	canonical	3	698	junction_5	55.1049906995728	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTAACAACTTTTGT	NA	False	NA	-5	True	AATAAA	-22	NA	51168331	51164667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.29	chr14	-	2900	3	FSM	ENSMUSG00000035953.15	ENSMUST00000163043.2	735	3	-42	-2123	-4	3	multi-exon	FALSE	canonical	3	698	junction_2	41.5	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCACTTAACAACTTTTG	NA	False	NA	-6	True	AATAAA	-21	NA	51168299	51164668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51167148_51167590_51167782_51168069
ES.10679.3	chr14	-	1324	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	-26	2090	-26	-2	multi-exon	FALSE	canonical	3	62	junction_9	170.895289578151	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTTGTGTTTTTCAG	NA	False	NA	-3	True	AATAAA	-22	NA	51162376	51153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.30	chr14	-	3201	2	ISM	ENSMUSG00000035953.15	ENSMUST00000162935.8	829	3	-18	-2045	0	2	intron_retention	FALSE	canonical	3	781	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCACTTAACAACTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	51168313	51164669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51167148_51167590
ES.10679.31	chr14	-	1654	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	-60	0	-60	0	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168373	51164671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.32	chr14	-	3535	2	ISM	ENSMUSG00000035953.15	ENSMUST00000159745.2	3232	3	8	-2	-5	0	intron_retention	FALSE	canonical	3	824	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168300	51164671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51166369_51166462
ES.10679.33	chr14	-	3705	1	Genic_Genomic	ENSMUSG00000035953.15	novel	NA	NA	NA	NA	-63	0	mono-exon	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168376	51164671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_51164700_51168400
ES.10679.34	chr14	-	1549	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	305.11550636148	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168299	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167640_51167782_51168069
ES.10679.35	chr14	-	1693	6	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	698	junction_5	59.8244097338202	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168299	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.36	chr14	-	2810	4	NIC	ENSMUSG00000035953.15	novel	877	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	698	junction_3	52.2961651451508	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168308	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51167148_51167590_51167782_51168069
ES.10679.37	chr14	-	2801	4	NNC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	15	junction_1	319.606355102996	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168300	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51166389_51166462_51167148_51167590_51167782_51168090
ES.10679.38	chr14	-	1715	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	258	junction_5	224.377717253742	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168293	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.39	chr14	-	1933	5	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	698	junction_4	66.6609893415932	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168263	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166516_51166658_51167148_51167590_51167782_51168069
ES.10679.4	chr14	-	1112	9	NNC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	254.75674672126	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTTGTGTTTTTCAG	NA	False	NA	-3	True	AATAAA	-22	NA	51162307	51153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154164_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ES.10679.40	chr14	-	1600	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.854364114784	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168306	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51165489_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.41	chr14	-	1524	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	-61	2	-17	0	multi-exon	FALSE	canonical	3	65	junction_3	295.870647412007	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168330	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ES.10679.42	chr14	-	1822	5	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	5	0	intron_retention	FALSE	canonical	3	698	junction_4	58.7473403653306	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168285	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.43	chr14	-	1691	7	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	298.976030254378	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168359	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51166516_51166626_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.44	chr14	-	1550	6	FSM	ENSMUSG00000035953.15	ENSMUST00000161166.8	1445	6	-107	2	-64	0	multi-exon	FALSE	canonical	3	65	junction_3	330.807859640608	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168377	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168090
ES.10679.45	chr14	-	2027	5	NIC	ENSMUSG00000035953.15	novel	1465	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	698	junction_4	61.5726197266285	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168308	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51167148_51167590_51167782_51168069
ES.10679.46	chr14	-	3154	4	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	787	junction_3	27.4023518860861	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCCCACTTAACAAC	NA	False	NA	-11	True	AATAAA	-16	NA	51168340	51164673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166516_51166658_51166765_51167040
ES.10679.47	chr14	-	2827	5	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	698	junction_4	58.5720709895083	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168302	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166516_51166658_51166765_51167040_51167782_51168069
ES.10679.48	chr14	-	1617	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_3	294.935821644114	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168325	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51165495_51166277_51166369_51166462_51166509_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.49	chr14	-	3255	3	ISM	ENSMUSG00000035953.15	ENSMUST00000160538.2	877	5	-39	-1608	-4	-1	intron_retention	FALSE	canonical	3	787	junction_2	18.5	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168299	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51166369_51166462_51166765_51167040
ES.10679.50	chr14	-	2239	5	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	65	junction_2	328.035821214696	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168284	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168090
ES.10679.51	chr14	-	2275	5	NIC	ENSMUSG00000035953.15	novel	1465	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	65	junction_2	307.615831842251	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168299	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ES.10679.52	chr14	-	1666	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	258	junction_5	227.911737301965	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168294	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.53	chr14	-	1674	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	297.854364114784	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168299	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51165495_51166201_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.54	chr14	-	1490	6	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	314.716761549175	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168282	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.55	chr14	-	2531	5	FSM	ENSMUSG00000035953.15	ENSMUST00000160538.2	877	5	-46	-1608	0	-1	multi-exon	FALSE	canonical	3	698	junction_4	46.0570298651574	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168306	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.56	chr14	-	2342	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	9	-1	intron_retention	FALSE	canonical	3	258	junction_5	222.97210587874	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168281	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.58	chr14	-	3304	2	NIC	ENSMUSG00000035953.15	novel	3232	3	NA	NA	3	-1	intron_retention	FALSE	canonical	3	258	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168287	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51167782_51168090
ES.10679.59	chr14	-	3353	2	NIC	ENSMUSG00000035953.15	novel	735	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	698	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168315	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51167782_51168069
ES.10679.6	chr14	-	2069	16	Fusion	ENSMUSG00000035953.15_ENSMUSG00000006289.15	novel	3388	11	NA	NA	-5	-2	multi-exon	FALSE	canonical	0	0	junction_9	288.052418069274	748	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTTGTGTTTTTCAG	NA	False	NA	-3	True	AATAAA	-22	NA	51168300	51153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51165193_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.60	chr14	-	3394	2	NIC	ENSMUSG00000035953.15	novel	321	3	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	787	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTCCCACTTAACAA	NA	False	NA	-12	True	AATAAA	-15	NA	51168344	51164674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51166765_51167040
ES.10679.61	chr14	-	1617	7	NNC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	296.433663180595	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTTCCCACTTAACA	NA	False	NA	-13	True	AATAAA	-14	NA	51168299	51164675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51165495_51166277_51166389_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.62	chr14	-	1609	7	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	332.498955721	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTTCCCACTTAACA	NA	False	NA	-13	True	AATAAA	-14	NA	51168300	51164675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51166516_51166626_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.63	chr14	-	2372	5	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	-30	4	-30	-2	intron_retention	FALSE	canonical	3	787	junction_4	29.9864552756741	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCTTTCCCACTTAACA	NA	False	NA	-13	True	AATAAA	-14	NA	51168343	51164675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040
ES.10679.64	chr14	-	2255	4	NIC	ENSMUSG00000035953.15	novel	1465	6	NA	NA	161	-3	intron_retention	FALSE	canonical	3	698	junction_3	70.7358152250722	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACCTTTCCCACTTAAC	NA	False	NA	-14	True	AATAAA	-13	NA	51168096	51164676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51166277_51166369_51166462_51167782_51168069
ES.10679.65	chr14	-	1473	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	6	1276	-5	-127	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGAATTCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	51168300	51164800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ES.10679.66	chr14	-	1209	4	NIC	ENSMUSG00000035953.15	novel	2755	7	NA	NA	0	-147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	350.246579807236	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCCCCTAATCCTGT	NA	False	NA	NA	False	NA	NA	NA	51168306	51164820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51165495_51167040_51167148_51167590_51167782_51168069
ES.10679.67	chr14	-	1376	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	68	150	12	-148	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTCCCCTAATCCTG	NA	False	NA	NA	False	NA	NA	NA	51168245	51164821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ES.10679.7	chr14	-	1328	11	NIC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	186.264355151489	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTTGTGTTTTTCAG	NA	False	NA	-3	True	AATAAA	-22	NA	51162352	51153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157277_51157386_51157507_51162120
ES.10679.8	chr14	-	1390	4	NIC	ENSMUSG00000006289.15	novel	586	6	NA	NA	-138	-2	intron_retention	FALSE	canonical	3	624	junction_3	19.8158185969358	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTTGTGTTTTTCAG	NA	False	NA	-3	True	AATAAA	-22	NA	51154969	51153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_51153356_51153608_51153708_51153798_51154162_51154256
ES.10679.9	chr14	-	1227	11	NNC	ENSMUSG00000006289.15	novel	3388	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	239.350287236093	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTTGTGTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	51162286	51153141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162126
ES.1068.1	chr1	+	3810	1	Antisense	novelGene_ENSMUSG00000026279.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAACCTTTAGCCGG	NA	False	NA	NA	False	NA	NA	NA	93659271	93663081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_93659300_93663100
ES.10680.1	chr14	+	1471	7	NIC	ENSMUSG00000115338.3	novel	671	6	NA	NA	-14	1118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.2051318902425	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTGGTTCGGTA	6279	False	NA	5	True	AATAAA	-17	NA	51168524	51189469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_51168610_51172680_51172817_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ES.10680.2	chr14	+	185	1	Intergenic	novelGene_8950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAATGA	6124	False	NA	NA	False	NA	NA	NA	51178852	51179037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51178900_51179000
ES.10680.4	chr14	+	1318	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	225	1399	4	1119	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGGTTCGGTAT	9255	False	NA	6	True	AATAAA	-18	NA	51181983	51189470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ES.10680.5	chr14	+	1662	5	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	260	1401	1	1117	intron_retention	FALSE	canonical	3	117	junction_1	42.0081837265074	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTGTGTGGTTCGGT	9290	False	NA	4	True	AATAAA	-16	NA	51182018	51189468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288
ES.10681.1	chr14	+	1067	5	ISM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	3592	-1	3340	1	3prime_fragment	FALSE	canonical	2	7	junction_2	39.0280347955159	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTGCTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	51197040	51202207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
ES.10682.1	chr14	-	190	1	Intergenic	novelGene_8951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAATAAATAAGT	1187	False	NA	NA	False	NA	NA	NA	51197756	51197566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51197600_51197800
ES.10683.1	chr14	-	183	1	Intergenic	novelGene_8952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAAAAAAACACATT	3410	False	NA	NA	False	AATAAA	-13	NA	51215826	51215643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51215600_51215800
ES.10684.1	chr14	+	156	1	Intergenic	novelGene_8953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTCCCTTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	51238707	51238863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51238700_51238900
ES.10685.1	chr14	-	181	1	Intergenic	novelGene_8954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATTAGCAAG	NA	False	NA	NA	False	NA	NA	NA	51280306	51280125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51280100_51280300
ES.10686.1	chr14	-	132	1	Intergenic	novelGene_8955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	51323434	51323302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51323300_51323400
ES.10687.1	chr14	+	2105	2	NNC	ENSMUSG00000072115.12	novel	728	2	NA	NA	104	-8597	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	51328710	51330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51330652_51330701
ES.10688.1	chr14	+	3039	1	Genic_Genomic	ENSMUSG00000021876.16_ENSMUSG00000072115.12	novel	NA	NA	NA	NA	-2015	-4982	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCCGGAATCAGGAA	NA	False	NA	NA	False	NA	NA	NA	51331441	51334480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_51331400_51334500
ES.10689.1	chr14	-	3848	1	Antisense	novelGene_ENSMUSG00000072115.12_AS_novelGene_ENSMUSG00000021876.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CACAAAAAAAAAAAAAAAAA	8916	False	NA	NA	False	NA	NA	NA	51336572	51332724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_51332700_51336600
ES.1069.1	chr1	+	4725	1	Genic_Genomic	ENSMUSG00000026280.18_ENSMUSG00000101952.2	novel	NA	NA	NA	NA	-3681	1471	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93675540	93680265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_93675500_93680300
ES.1069.10	chr1	+	4052	12	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	21	1181	21	-1181	intron_retention	FALSE	canonical	3	280	junction_10	29.4396707671134	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGTCTTGTGTGTGTGT	NA	False	NA	NA	False	GATAAA	-17	NA	93682647	93717151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232
ES.1069.11	chr1	+	1769	14	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	120.038553964424	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682662	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713465_93713529_93713631_93713689_93714232_93714327_93715407
ES.1069.12	chr1	+	1731	14	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	119.519798562919	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682676	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712350_93712390_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.13	chr1	+	4481	11	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	-20	-1184	intron_retention	FALSE	canonical	3	287	junction_1	28.6048946860498	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGTCTTGTGTGTG	NA	False	NA	NA	False	GATAAA	-14	NA	93682689	93717148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93714327_93715407
ES.1069.15	chr1	+	4007	12	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	280	junction_9	29.2927655864461	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAAAGACATGAATTTCT	NA	False	NA	13	True	ATTAAA	-19	NA	93682713	93715900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.16	chr1	+	1556	12	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	92.2174935448935	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682713	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.17	chr1	+	1476	13	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	93.4008684232766	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACATGAATTTCTGGG	NA	False	NA	16	True	ATTAAA	-22	NA	93682718	93715903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715583
ES.1069.18	chr1	+	4234	12	FSM	ENSMUSG00000026280.18	ENSMUST00000135762.8	4186	12	-48	0	9	0	multi-exon	FALSE	canonical	3	280	junction_9	30.7520072582787	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682718	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.19	chr1	+	6393	11	NNC	ENSMUSG00000026280.18	novel	4186	12	NA	NA	16	6	intron_retention	FALSE	canonical	1	1	junction_6	102.98257134098	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAATTTCTGGGGCAC	NA	False	NA	20	True	ATTAAA	-26	NA	93682725	93715907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93706087_93707290_93708634_93712133_93712213_93712474_93713689_93714232_93714327_93715407
ES.1069.2	chr1	+	1060	1	Genic_Genomic	ENSMUSG00000026280.18_ENSMUSG00000101952.2	novel	NA	NA	NA	NA	-579	908	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93678642	93679702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_93678600_93679700
ES.1069.20	chr1	+	2033	12	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	19	0	intron_retention	FALSE	canonical	3	280	junction_9	30.4017180897711	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682728	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.21	chr1	+	3033	5	NNC	ENSMUSG00000026280.18	novel	420	6	NA	NA	19	-3399	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	163.192179653315	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCACCACCTAACCAGGA	NA	False	NA	NA	False	NA	NA	NA	93682728	93699771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93698088_93698876_93699189_93699313
ES.1069.22	chr1	+	2972	13	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	-10	-1176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	94.1694689848514	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93682746	93717156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703518_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.23	chr1	+	2916	14	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	-10	-1176	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	119.519798562919	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93682746	93717156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712350_93712390_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.24	chr1	+	2797	12	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	-3	-1176	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	98.2800855036847	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93682753	93717156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.25	chr1	+	1637	12	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	13145	2389	-27	42	3prime_fragment	FALSE	canonical	3	280	junction_9	28.3639277374311	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGATCTGCAGGTTATGT	2044	False	NA	56	True	NA	NA	NA	93695771	93715943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.26	chr1	+	2845	12	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	13145	1181	-27	-1181	3prime_fragment	FALSE	canonical	3	280	junction_9	28.3639277374311	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGTCTTGTGTGTGTGT	2044	False	NA	NA	False	GATAAA	-17	NA	93695771	93717151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.3	chr1	+	2934	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	-13	-1184	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGTCTTGTGTGTG	NA	False	NA	NA	False	GATAAA	-14	NA	93679208	93717148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.4	chr1	+	1711	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	5	42	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGATCTGCAGGTTATGT	NA	False	NA	56	True	NA	NA	NA	93679226	93715943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.5	chr1	+	3135	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	-138	1176	-138	-1176	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93682488	93717156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.6	chr1	+	1789	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	-5	2389	-5	42	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGATCTGCAGGTTATGT	NA	False	NA	56	True	NA	NA	NA	93682621	93715943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ES.1069.7	chr1	+	2808	12	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	15	2431	15	0	intron_retention	FALSE	canonical	3	280	junction_10	29.4396707671134	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682641	93715901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232
ES.1069.8	chr1	+	4200	12	NNC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	16	-1184	intron_retention	TRUE	canonical	1	1	junction_6	128.236352035884	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGTCTTGTGTGTG	NA	False	NA	NA	False	GATAAA	-14	NA	93682642	93717148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703518_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93713689_93714232_93714448_93715407
ES.1069.9	chr1	+	4305	6	ISM	ENSMUSG00000026280.18	ENSMUST00000135762.8	4186	12	-124	8756	16	1135	5prime_fragment	FALSE	canonical	3	287	junction_1	32.5785205311721	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93682642	93707145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349
ES.10690.1	chr14	+	1216	3	NNC	ENSMUSG00000021880.8	novel	1072	2	NA	NA	1975	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTCCATTCTTGCTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	51363339	51368595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_51363464_51366520_51366622_51367604
ES.10691.1	chr14	+	127	1	Intergenic	novelGene_8956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTG	NA	False	NA	NA	False	NA	NA	NA	51384854	51384981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51384900_51385000
ES.10692.1	chr14	-	177	1	Intergenic	novelGene_8957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTTTAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	51393694	51393517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_51393500_51393700
ES.10693.1	chr14	-	3345	1	Antisense	novelGene_ENSMUSG00000089761.4_AS_novelGene_ENSMUSG00000115374.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGTTGATTTTATCA	NA	False	NA	NA	False	AATAAA	-27	NA	51672010	51668665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_51668700_51672000
ES.10694.1	chr14	+	1937	1	Intergenic	novelGene_8958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	51672303	51674240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_51672300_51674200
ES.10695.1	chr14	+	158	1	Intergenic	novelGene_8959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	52014856	52015014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52014900_52015000
ES.10696.1	chr14	+	5339	1	Intergenic	novelGene_8960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTTTCCAGAGGGTA	NA	False	NA	NA	False	NA	NA	NA	52106939	52112278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52106900_52112300
ES.10697.1	chr14	+	173	1	Intergenic	novelGene_8961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAAAGTTG	6717	False	NA	NA	False	NA	NA	NA	52117663	52117836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52117700_52117800
ES.10698.1	chr14	+	4182	8	NIC	ENSMUSG00000004561.15	novel	3404	11	NA	NA	-77	4	intron_retention	FALSE	canonical	3	141	junction_6	19.5552592226569	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGGTGGATGTTCTGA	NA	False	NA	NA	False	AATAAA	-12	NA	52122221	52129321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52129009_52129083
ES.10698.10	chr14	+	1544	12	FSM	ENSMUSG00000004561.15	ENSMUST00000163603.8	1513	12	36	-67	7	0	multi-exon	FALSE	canonical	3	48	junction_6	39.3664706097011	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122381	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52122481_52122607_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.11	chr14	+	4224	7	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	156	junction_6	14.7648230602334	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122387	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134
ES.10698.12	chr14	+	1651	12	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_11	52.0532149831559	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122387	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52129083
ES.10698.13	chr14	+	2311	11	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	141	junction_9	17.0926884953772	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122387	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52129009_52129083
ES.10698.14	chr14	+	1608	13	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	73.158313874015	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122387	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122860_52122980_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.15	chr14	+	1710	14	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	42.8658289309892	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGGATGTTCTGATTG	NA	False	NA	NA	False	AATAAA	-15	NA	52122390	52129324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.16	chr14	+	3395	12	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	21	junction_6	46.5860973125021	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGGATGTTCTGATTG	NA	False	NA	NA	False	AATAAA	-15	NA	52122390	52129324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52124437_52124679_52124762_52125429_52125504_52126198_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.17	chr14	+	1598	13	FSM	ENSMUSG00000004561.15	ENSMUST00000164902.8	1461	13	-12	-125	-1	0	multi-exon	FALSE	canonical	0	0	junction_8	49.8556248916141	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122390	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823
ES.10698.18	chr14	+	1509	14	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.7277864767855	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGGTGGATGTTCTGA	NA	False	NA	NA	False	AATAAA	-12	NA	52122392	52129321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122860_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.19	chr14	+	3598	10	NIC	ENSMUSG00000004561.15	novel	3404	11	NA	NA	3	4	intron_retention	FALSE	canonical	3	141	junction_7	17.8207813216363	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGGTGGATGTTCTGA	NA	False	NA	NA	False	AATAAA	-12	NA	52122397	52129321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.2	chr14	+	2304	12	NIC	ENSMUSG00000004561.15	novel	1426	13	NA	NA	-73	0	intron_retention	FALSE	canonical	0	0	junction_11	52.0322531887754	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122225	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129005_52129083
ES.10698.20	chr14	+	4060	9	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	45	0	intron_retention	FALSE	canonical	3	156	junction_6	13.6656503687164	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122455	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52124437_52124679_52124762_52125429_52125504_52126198_52127389_52128134_52128659_52128823_52129009_52129083
ES.10698.21	chr14	+	3462	10	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	-71	0	intron_retention	FALSE	canonical	3	21	junction_4	48.8575657231821	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122526	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52124437_52124679_52124762_52125429_52125504_52126198_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.22	chr14	+	3679	7	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	492	0	intron_retention	FALSE	canonical	3	141	junction_4	16.709943812659	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52123350	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.23	chr14	+	2534	9	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	761	0	intron_retention	FALSE	canonical	3	21	junction_4	51.7391292930215	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52123619	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52124437_52124679_52124762_52125429_52125504_52126198_52126855_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52129009_52129083
ES.10698.24	chr14	+	1264	5	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	2205	0	intron_retention	FALSE	canonical	3	156	junction_2	13.9171656597168	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52126840	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52127093_52127319_52127389_52128134_52128659_52128823_52129009_52129083
ES.10698.25	chr14	+	2369	1	NIC	ENSMUSG00000004561.15	novel	1623	14	NA	NA	2313	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52126948	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52126900_52129300
ES.10698.26	chr14	+	1523	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	-126	937	-126	2	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGCAATTCTGCCTC	NA	False	NA	16	True	AATAAA	-27	NA	52130940	52133265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
ES.10698.27	chr14	+	1759	3	FSM	ENSMUSG00000072572.10	ENSMUST00000160668.2	2508	3	749	0	28	0	multi-exon	FALSE	canonical	3	12	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTGCAATTCTGCC	NA	False	NA	14	True	AATAAA	-25	NA	52131094	52133263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52131372_52131545_52131677_52131912
ES.10698.3	chr14	+	3054	11	NNC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	-58	0	intron_retention	FALSE	canonical	1	6	junction_2	61.5555846369767	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122240	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52122481_52122607_52124437_52124685_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.4	chr14	+	3913	9	NIC	ENSMUSG00000004561.15	novel	3404	11	NA	NA	-45	2	intron_retention	FALSE	canonical	3	141	junction_7	18.3059928711884	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGATGTTCTGATTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	52122253	52129327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52129009_52129083
ES.10698.5	chr14	+	1629	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	-9	3	-9	-3	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGGTGGATGTTCTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	52122289	52129322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.6	chr14	+	2225	13	NNC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	-10	6323	intron_retention	FALSE	non_canonical	0	0	junction_12	50.0673851479739	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAGAGCTGTGCTCA	NA	False	NA	NA	False	NA	NA	NA	52122322	52136819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083_52129312_52136799
ES.10698.7	chr14	+	3126	11	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_5	41.0073164203658	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122334	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.8	chr14	+	3571	11	NIC	ENSMUSG00000004561.15	novel	1430	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	141	junction_8	17.0202820188151	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122337	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52122762_52122844_52124437_52124679_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ES.10698.9	chr14	+	4398	7	NIC	ENSMUSG00000004561.15	novel	1844	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	156	junction_5	14.9415527974839	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	False	NA	NA	False	AATAAA	-8	NA	52122381	52129317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52122481_52122607_52124762_52125429_52125504_52126198_52127093_52127319_52127389_52128134_52129009_52129083
ES.10699.1	chr14	+	5338	23	NIC	ENSMUSG00000004562.17	novel	5108	24	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_22	7.39569340844626	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	9	True	ATTAAA	-21	NA	52221993	52243086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242615
ES.10699.10	chr14	+	7738	19	NNC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	9.82516924115223	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGACTCTGAGGAGCTC	NA	False	NA	2	True	ATTAAA	-14	NA	52222174	52243079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52232844_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52242493_52242797
ES.10699.11	chr14	+	6380	16	NIC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-1	-2578	intron_retention	FALSE	canonical	3	11	junction_2	7.03199039311694	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52222174	52238842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224859_52227396_52227504_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305
ES.10699.12	chr14	+	5308	22	ISM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	-213	-34	-1	2	intron_retention	FALSE	canonical	3	11	junction_3	6.62332852315387	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTGGTTGAACTGACT	NA	False	NA	37	True	AATATA	-45	NA	52222174	52243114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445
ES.10699.13	chr14	+	5840	22	NNC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_6	8.98221977624927	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGACTCTGAGGAGC	NA	False	NA	0	True	ATTAAA	-12	NA	52222174	52243077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229144_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52242493_52242797
ES.10699.14	chr14	+	5237	25	NIC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	10.012145402238	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCTGAGGAGCTCGCG	NA	False	NA	5	True	ATTAAA	-17	NA	52222174	52243082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52222761_52222884_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
ES.10699.15	chr14	+	4971	23	NNC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	8.13331583342741	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGAGGAGCTCGCGC	NA	False	NA	6	True	ATTAAA	-18	NA	52222189	52243083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242204_52242435_52242493_52242797
ES.10699.16	chr14	+	4930	22	NIC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	41	-1	intron_retention	FALSE	canonical	0	0	junction_9	8.27503416767511	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGCTCGCGCAGGCCT	NA	False	NA	12	True	ATTAAA	-24	NA	52222216	52243089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242335_52242493_52242797
ES.10699.17	chr14	+	5178	25	NIC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_22	9.53356643071673	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGGAGCTCGCGCA	NA	False	NA	7	True	ATTAAA	-19	NA	52222220	52243084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224572_52224680_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
ES.10699.18	chr14	+	4799	22	NIC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	8.1209675149384	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGACTCTGAGGAGCTC	NA	False	NA	2	True	ATTAAA	-14	NA	52222238	52243079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52242068_52242200_52242445_52242493_52242797
ES.10699.19	chr14	+	3778	19	NNC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_10	9.07989231458416	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGGAGCTCGCGCA	NA	False	NA	7	True	ATTAAA	-19	NA	52222262	52243084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231831_52235256_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242335_52242493_52242797
ES.10699.2	chr14	+	6295	20	NNC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-77	0	intron_retention	FALSE	non_canonical	0	0	junction_8	9.37167300153209	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52222098	52243080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231737_52231865_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068
ES.10699.20	chr14	+	4885	23	NNC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	9.30486853815768	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGACTCTGAGGAGC	NA	False	NA	0	True	ATTAAA	-12	NA	52222281	52243077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242056_52242204_52242435_52242493_52242797
ES.10699.22	chr14	+	5005	24	NNC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	9.53473403504747	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGAGGAGCTCGCGC	NA	False	NA	6	True	ATTAAA	-18	NA	52222299	52243083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242204_52242435_52242493_52242797
ES.10699.23	chr14	+	7829	21	NNC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_15	9.74884608556315	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	9	True	ATTAAA	-21	NA	52222300	52243086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52236338_52236477_52237279_52237496_52238305_52238477_52239741_52242200_52242335_52242493_52242797
ES.10699.24	chr14	+	7440	19	ISM	ENSMUSG00000004562.17	ENSMUST00000100639.11	4843	24	-18	-5	2	0	intron_retention	FALSE	canonical	3	11	junction_3	6.83310749400969	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGGAGCTCGCGCA	NA	False	NA	7	True	ATTAAA	-19	NA	52222302	52243084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741
ES.10699.25	chr14	+	4939	24	NIC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	8.23726605038815	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGACTCTGAGGAGC	NA	False	NA	0	True	ATTAAA	-12	NA	52222308	52243077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224572_52224680_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242797
ES.10699.26	chr14	+	7149	21	NNC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_2	8.97482590360393	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGACTCTGAGGAGC	NA	False	NA	0	True	ATTAAA	-12	NA	52222385	52243077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224572_52224680_52224862_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52242493_52242797
ES.10699.27	chr14	+	9086	16	NIC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	2113	0	intron_retention	FALSE	canonical	0	0	junction_13	8.77015139866785	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52224540	52243080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52237279_52238477_52239741_52242493_52242797
ES.10699.28	chr14	+	6505	16	NIC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-2052	-2	intron_retention	FALSE	canonical	3	11	junction_1	6.53401357002978	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGACTCTGAGGAGC	NA	False	NA	0	True	ATTAAA	-12	NA	52227038	52243077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235688_52237279_52237496_52238305_52238477_52239741
ES.10699.3	chr14	+	6991	20	NNC	ENSMUSG00000004562.17	novel	4756	23	NA	NA	-62	-16	intron_retention	FALSE	non_canonical	0	0	junction_10	10.4069548447792	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTACTCTCACTG	NA	False	NA	-14	True	NA	NA	NA	52222113	52243063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231852_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52237279_52237496_52238305_52238477_52239741_52242221_52242441_52242493_52242797
ES.10699.30	chr14	+	4759	3	ISM	ENSMUSG00000004562.17	ENSMUST00000182644.8	1429	9	1042	1	1042	1	intron_retention	FALSE	canonical	3	23	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGAGGAGCTCGCGCAG	NA	False	NA	8	True	ATTAAA	-20	NA	52236251	52243085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52237496_52238305_52238477_52239741
ES.10699.31	chr14	+	4369	1	Genic_Genomic	ENSMUSG00000004562.17	novel	NA	NA	NA	NA	-114	1574	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52240913	52245282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_52240900_52245300
ES.10699.4	chr14	+	6042	23	NIC	ENSMUSG00000004562.17	novel	5108	24	NA	NA	-62	3	intron_retention	FALSE	canonical	2	3	junction_2	8.91743579494828	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGGTTGAACTGACTT	NA	False	NA	38	True	NA	NA	NA	52222113	52243115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224572_52224680_52224859_52225058_52226158_52227396_52227504_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242615
ES.10699.5	chr14	+	5333	24	FSM	ENSMUSG00000004562.17	ENSMUST00000182909.8	5108	24	-225	0	-35	0	multi-exon	FALSE	canonical	2	2	junction_21	8.94173536736366	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGGAGCTCGCGCA	NA	False	NA	7	True	ATTAAA	-19	NA	52222140	52243084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242615
ES.10699.6	chr14	+	5127	24	FSM	ENSMUSG00000004562.17	ENSMUST00000093813.12	5621	24	-134	628	-15	0	multi-exon	FALSE	canonical	2	2	junction_21	8.41571129479579	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52222160	52243080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
ES.10699.7	chr14	+	4989	23	FSM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	-227	-6	-15	0	multi-exon	FALSE	canonical	3	11	junction_3	6.51951932518073	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGAGCTCGCGCAGG	NA	False	NA	9	True	ATTAAA	-21	NA	52222160	52243086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242797
ES.10699.8	chr14	+	5238	24	NIC	ENSMUSG00000004562.17	novel	5621	24	NA	NA	-13	0	intron_retention	FALSE	canonical	2	2	junction_21	8.82105232289072	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGAGGAGCTCGCGC	NA	False	NA	6	True	ATTAAA	-18	NA	52222162	52243083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242335_52242493_52242797
ES.10699.9	chr14	+	4938	24	NNC	ENSMUSG00000004562.17	novel	4843	24	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	9.42987249511371	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52222172	52243080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52222449_52224859_52225058_52226158_52226282_52226435_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229459_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242335_52242493_52242797
ES.107.1	chr1	-	3825	2	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTGGGTTTGCTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	13085571	13081701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13082710_13082754
ES.1070.1	chr1	+	1483	1	Antisense	novelGene_ENSMUSG00000026281.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	5947	False	NA	NA	False	NA	NA	NA	93725602	93727085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_93725600_93727100
ES.10700.1	chr14	+	1308	7	FSM	ENSMUSG00000072571.4	ENSMUST00000100638.4	1234	7	-79	5	-79	-5	multi-exon	TRUE	canonical	3	12	junction_4	6.83130051063973	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTGAGTGACGCCAGG	NA	False	NA	18	True	AATAAA	-32	NA	52254242	52257246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52254399_52254512_52254655_52255207_52255319_52255410_52255468_52255998_52256110_52256188_52256336_52256662
ES.10700.2	chr14	+	1885	6	NNC	ENSMUSG00000072571.4	novel	1234	7	NA	NA	-34	-5	intron_retention	FALSE	canonical	0	0	junction_3	10.6470653233649	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTGAGTGACGCCAGG	NA	False	NA	18	True	AATAAA	-32	NA	52254287	52257246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52254399_52254512_52255319_52255410_52255468_52255929_52256110_52256188_52256336_52256662
ES.10700.3	chr14	+	3765	3	Fusion	ENSMUSG00000072571.4_ENSMUSG00000115454.2	novel	704	6	NA	NA	-32	-2	intron_retention	FALSE	canonical	0	0	junction_2	16.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATAATGGTGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	52254289	52259363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_52254399_52254512_52255468_52256662
ES.10700.4	chr14	+	1181	2	ISM	ENSMUSG00000072571.4	ENSMUST00000227295.2	704	6	1346	-422	1346	-22	3prime_fragment	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGGGGGCGCTGTGCATC	NA	False	NA	1	True	AATAAA	-15	NA	52255721	52257229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52256336_52256662
ES.10700.5	chr14	+	2696	2	ISM	ENSMUSG00000072571.4_ENSMUSG00000115454.2	ENSMUST00000227295.2	704	6	1565	-2156	1565	-402	3prime_fragment	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCGTAAAGCCTCACTCA	NA	False	NA	NA	False	NA	NA	NA	52255940	52258963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52256336_52256662
ES.10701.1	chr14	-	2048	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	39	12	-11	0	multi-exon	FALSE	canonical	3	23	junction_14	42.8779145429854	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	False	NA	-11	True	AATAAA	-16	NA	52150848	52142739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
ES.10701.10	chr14	-	2513	13	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	127	junction_5	10.5234526442397	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGCATTGTTAATCCG	NA	False	NA	-13	True	AATAAA	-14	NA	52150826	52142741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52148243_52148922_52149004_52150779
ES.10701.11	chr14	-	2114	17	NNC	ENSMUSG00000004558.16	novel	2099	16	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	59.9184015453517	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGCATTGTTAATCCG	NA	False	NA	-13	True	AATAAA	-14	NA	52150758	52142741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150050_52150157_52150727
ES.10701.12	chr14	-	3690	14	ISM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	187	2	53	-2	3prime_fragment	FALSE	canonical	3	127	junction_6	10.4626696221042	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGCATTGTTAATCCG	NA	False	NA	-13	True	AATAAA	-14	NA	52150758	52142741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922
ES.10701.13	chr14	-	2135	16	NIC	ENSMUSG00000004558.16	novel	2099	16	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	50.5896783499911	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAACAGCATTGTTAA	9385	False	NA	-17	True	AATAAA	-10	NA	52151542	52142745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52151380
ES.10701.15	chr14	-	166	1	Intergenic	novelGene_8962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGATTATCTGTCG	5706	False	NA	NA	False	NA	NA	NA	52232093	52231927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52231900_52232100
ES.10701.16	chr14	-	2849	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	-30	-7	2	2	multi-exon	FALSE	canonical	3	96	junction_3	140.753527684231	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGCCTGTGTTTC	4696	False	NA	0	True	AATAAA	-27	NA	52258188	52243531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
ES.10701.17	chr14	-	3069	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-92	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	158.033817583453	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGCCTGTGTTTC	5340	False	NA	0	True	AATAAA	-27	NA	52257544	52243531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257204
ES.10701.18	chr14	-	2918	5	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	155.633182515812	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	5742	False	NA	-2	True	AATAAA	-25	NA	52257142	52243533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52256951
ES.10701.19	chr14	-	3051	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	-247	0	83	0	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	5518	False	NA	-2	True	AATAAA	-25	NA	52252286	52243533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
ES.10701.2	chr14	-	2029	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	74	0	16	0	multi-exon	FALSE	canonical	3	127	junction_6	11.1385064766607	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	False	NA	-11	True	AATAAA	-16	NA	52150871	52142739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ES.10701.20	chr14	-	3734	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	5774	False	NA	-2	True	AATAAA	-25	NA	52257110	52243533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52255799_52256327_52256951
ES.10701.21	chr14	-	6532	3	ISM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	1026	0	1026	0	intron_retention	FALSE	canonical	3	352	junction_2	36	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	6791	False	NA	-2	True	AATAAA	-25	NA	52251013	52243533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52244605_52244820_52244953_52245684
ES.10701.22	chr14	-	2837	4	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	179.668831155793	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTCTGCCTGTGT	5733	False	NA	-3	True	AATAAA	-24	NA	52257151	52243534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52256951
ES.10701.23	chr14	-	3484	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	164.069009870847	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGCCTGTG	5393	False	NA	-4	True	AATAAA	-23	NA	52257491	52243535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257053
ES.10701.24	chr14	-	3174	5	NNC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	159.637675690922	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGCCTGTG	5747	False	NA	-4	True	AATAAA	-23	NA	52252057	52243535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251608
ES.10701.25	chr14	-	3603	4	NNC	ENSMUSG00000049295.18	novel	495	4	NA	NA	3	2	intron_retention	TRUE	non_canonical	0	0	junction_1	106.289959805974	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	4744	False	NA	-5	True	AATAAA	-22	NA	52258140	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52245266_52245495_52247120_52247426_52247516_52257979
ES.10701.26	chr14	-	2969	5	FSM	ENSMUSG00000049295.18	ENSMUST00000067549.15	2933	5	-34	-2	-34	2	multi-exon	FALSE	canonical	3	82	junction_4	128.195895020082	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	4660	False	NA	-5	True	AATAAA	-22	NA	52258224	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257979
ES.10701.27	chr14	-	3184	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-89	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	175.29928693523	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	5625	False	NA	-5	True	AATAAA	-22	NA	52257259	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52256174_52256327_52256951
ES.10701.28	chr14	-	4278	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-39	2	intron_retention	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	5393	False	NA	-5	True	AATAAA	-22	NA	52257491	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252937_52255844_52256327_52256951
ES.10701.29	chr14	-	3599	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	5742	False	NA	-5	True	AATAAA	-22	NA	52257142	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252937_52256174_52256327_52256951
ES.10701.30	chr14	-	3250	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	6	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	164.327234504814	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	4700	False	NA	-5	True	AATAAA	-22	NA	52258184	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257979
ES.10701.31	chr14	-	5760	4	ISM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	1488	3	1488	2	3prime_fragment	FALSE	canonical	3	255	junction_3	69.2451362110646	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGTCTGCCTGT	7253	False	NA	-5	True	AATAAA	-22	NA	52250551	52243536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426
ES.10701.32	chr14	-	3134	6	FSM	ENSMUSG00000049295.18	ENSMUST00000166169.4	3017	6	-112	-5	-87	1	multi-exon	FALSE	canonical	3	13	junction_5	162.277540035582	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGTCTGCCTG	5627	False	NA	-6	True	AATAAA	-21	NA	52257257	52243537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52256951
ES.10701.33	chr14	-	3310	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-89	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	165.365776386772	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGTCTGCCTG	5625	False	NA	-6	True	AATAAA	-21	NA	52257259	52243537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252937_52257204
ES.10701.34	chr14	-	2911	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-278	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	165.626809424078	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGTCTGCCTG	10	True	NA	-6	True	AATAAA	-21	NA	52257730	52243537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52257647
ES.10701.35	chr14	-	3135	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-1012	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	165.626809424078	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGTCTGCCTG	9289	False	NA	-6	True	AATAAA	-21	NA	52253595	52243537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52253504
ES.10701.36	chr14	-	3448	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	164.069009870847	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5355	False	NA	-7	True	AATAAA	-20	NA	52257529	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52256951
ES.10701.37	chr14	-	3458	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	165.365776386772	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5627	False	NA	-7	True	AATAAA	-20	NA	52257257	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252937_52257053
ES.10701.38	chr14	-	3368	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	170.485010745487	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5760	False	NA	-7	True	AATAAA	-20	NA	52257124	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52256174_52256327_52256951
ES.10701.39	chr14	-	3159	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	164.586026138309	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5391	False	NA	-7	True	AATAAA	-20	NA	52257493	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52257204
ES.10701.4	chr14	-	2196	14	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	17	0	intron_retention	TRUE	canonical	3	127	junction_6	10.610924369551	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	False	NA	-11	True	AATAAA	-16	NA	52150794	52142739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52148243_52148922_52149004_52150779
ES.10701.40	chr14	-	3445	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	165.365776386772	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5742	False	NA	-7	True	AATAAA	-20	NA	52257142	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252937_52256951
ES.10701.41	chr14	-	3359	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	164.327234504814	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5364	False	NA	-7	True	AATAAA	-20	NA	52257520	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257204
ES.10701.42	chr14	-	3609	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	162.023948847076	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5367	False	NA	-7	True	AATAAA	-20	NA	52257517	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52256951
ES.10701.43	chr14	-	3192	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	175.30385049964	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5731	False	NA	-7	True	AATAAA	-20	NA	52257153	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52255844_52256113_52256951
ES.10701.44	chr14	-	3103	6	NIC	ENSMUSG00000049295.18	novel	2933	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	174.623022537121	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	4708	False	NA	-7	True	AATAAA	-20	NA	52258176	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257647_52257832_52257979
ES.10701.45	chr14	-	5735	4	NNC	ENSMUSG00000049295.18	novel	2933	5	NA	NA	1593	0	intron_retention	FALSE	non_canonical	0	0	junction_1	185.251780618223	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	7358	False	NA	-7	True	AATAAA	-20	NA	52250446	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52243653_52243877_52244605_52244820_52244953_52245684
ES.10701.46	chr14	-	2831	5	NNC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	139.047428958611	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	5737	False	NA	-7	True	AATAAA	-20	NA	52252067	52243538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244600_52244811_52244953_52245684_52247120_52247426_52247516_52251962
ES.10701.47	chr14	-	3447	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	55	-1	intron_retention	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCCTGTGTGTGTCTGCC	5794	False	NA	-8	True	AATAAA	-19	NA	52257090	52243539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52255844_52256327_52256951
ES.10701.48	chr14	-	2878	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-87	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	165.365776386772	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5627	False	NA	-9	True	AATAAA	-18	NA	52257257	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52257204
ES.10701.49	chr14	-	2909	5	NNC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	158.835410094853	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5728	False	NA	-9	True	AATAAA	-18	NA	52252076	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251887
ES.10701.5	chr14	-	1030	1	NIC	ENSMUSG00000004558.16	novel	2099	16	NA	NA	2629	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	False	NA	-11	True	AATAAA	-16	NA	52143769	52142739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52142700_52143800
ES.10701.50	chr14	-	3110	6	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-264	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	165.626809424078	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	24	True	NA	-9	True	AATAAA	-18	NA	52257716	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252726_52257647
ES.10701.51	chr14	-	2812	5	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	159.637675690922	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5739	False	NA	-9	True	AATAAA	-18	NA	52257145	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257053
ES.10701.52	chr14	-	3505	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	-684	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	155.633182515812	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	8781	False	NA	-9	True	AATAAA	-18	NA	52249023	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52248238
ES.10701.53	chr14	-	2762	5	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	160.440604274604	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5455	False	NA	-9	True	AATAAA	-18	NA	52252349	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252307
ES.10701.54	chr14	-	2869	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-965	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	165.626809424078	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	9336	False	NA	-9	True	AATAAA	-18	NA	52253548	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52253504
ES.10701.56	chr14	-	3050	5	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	192.937003967616	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5733	False	NA	-9	True	AATAAA	-18	NA	52257151	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252726_52257053
ES.10701.57	chr14	-	2877	5	NNC	ENSMUSG00000049295.18	novel	2933	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.440604274604	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	4708	False	NA	-9	True	AATAAA	-18	NA	52258176	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52258019
ES.10701.58	chr14	-	3166	4	NIC	ENSMUSG00000049295.18	novel	2933	5	NA	NA	25	-2	intron_retention	FALSE	canonical	3	82	junction_3	147.214129756624	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	4766	False	NA	-9	True	AATAAA	-18	NA	52258118	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247516_52257979
ES.10701.59	chr14	-	1729	3	NNC	ENSMUSG00000049295.18	novel	2812	4	NA	NA	-1123	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	NA	False	NA	-9	True	AATAAA	-18	NA	52246256	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244566_52244820_52244953_52245684
ES.10701.6	chr14	-	1982	15	NNC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.273504596169	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	NA	False	NA	-11	True	AATAAA	-16	NA	52150862	52142739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150817
ES.10701.60	chr14	-	2944	4	NIC	ENSMUSG00000049295.18	novel	2812	4	NA	NA	-65	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	185.251780618223	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5367	False	NA	-9	True	AATAAA	-18	NA	52257517	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52257204
ES.10701.61	chr14	-	2956	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	165.105299733231	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5743	False	NA	-9	True	AATAAA	-18	NA	52257141	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52257053
ES.10701.62	chr14	-	2704	4	NNC	ENSMUSG00000049295.18	novel	2812	4	NA	NA	-264	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	185.251780618223	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	24	True	NA	-9	True	AATAAA	-18	NA	52257716	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52257643
ES.10701.63	chr14	-	3099	4	NIC	ENSMUSG00000049295.18	novel	2804	5	NA	NA	5	-2	intron_retention	FALSE	canonical	3	80	junction_3	148.138073731532	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5770	False	NA	-9	True	AATAAA	-18	NA	52252034	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247516_52251962
ES.10701.64	chr14	-	3252	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5701	False	NA	-9	True	AATAAA	-18	NA	52257183	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52256174_52256327_52256951
ES.10701.65	chr14	-	3260	5	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-89	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	190.980856370475	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5625	False	NA	-9	True	AATAAA	-18	NA	52257259	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252726_52256951
ES.10701.66	chr14	-	3354	5	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	194.180972291314	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5742	False	NA	-9	True	AATAAA	-18	NA	52257142	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252937_52256951
ES.10701.67	chr14	-	3474	7	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	70	-2	intron_retention	FALSE	canonical	0	0	junction_5	170.836585334901	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	5809	False	NA	-9	True	AATAAA	-18	NA	52257075	52243540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252553_52255844_52256327_52256951
ES.10701.68	chr14	-	3004	5	NIC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-87	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	193.184497307626	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCCTGTGTGTGTCTG	5627	False	NA	-10	True	AATAAA	-17	NA	52257257	52243541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252726_52257204
ES.10701.69	chr14	-	3294	6	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	189.820336107594	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCCTGTGTGTGTCTG	5742	False	NA	-10	True	AATAAA	-17	NA	52257142	52243541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252726_52256174_52256327_52256951
ES.10701.70	chr14	-	3070	5	NNC	ENSMUSG00000049295.18	novel	3017	6	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	194.431703947684	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGCCCTGTGTGTGTCT	5367	False	NA	-11	True	AATAAA	-16	NA	52257517	52243542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52244605_52244820_52244953_52245684_52247120_52252404_52252553_52257224
ES.10701.8	chr14	-	1157	2	NNC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	-134256	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGCATTGTTAATCCG	NA	False	NA	-13	True	AATAAA	-14	NA	52285871	52142741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52143753_52285725
ES.10701.9	chr14	-	2159	15	NIC	ENSMUSG00000004558.16	novel	2103	15	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	33.5830526988156	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGCATTGTTAATCCG	9323	False	NA	-13	True	AATAAA	-14	NA	52151604	52142741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52151380
ES.10702.1	chr14	-	175	1	Intergenic	novelGene_8963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCACAAGG	5232	False	NA	NA	False	NA	NA	NA	52291201	52291026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52291000_52291200
ES.10703.1	chr14	+	158	1	Intergenic	novelGene_8964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	52295002	52295160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52295000_52295200
ES.10703.2	chr14	+	299	1	Intergenic	novelGene_8965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACATACACACAC	NA	False	NA	NA	False	NA	NA	NA	52295002	52295301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52295000_52295300
ES.10704.1	chr14	+	157	1	Intergenic	novelGene_8966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	52298107	52298264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52298100_52298300
ES.10705.1	chr14	-	176	1	Intergenic	novelGene_8967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAACAGTGAATA	3563	False	NA	NA	False	NA	NA	NA	52301530	52301354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52301400_52301500
ES.10706.1	chr14	+	120	1	Intergenic	novelGene_8968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTCCCAGGC	9141	False	NA	NA	False	NA	NA	NA	52314045	52314165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52314000_52314200
ES.10707.1	chr14	+	178	1	Intergenic	novelGene_8969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	52316594	52316772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52316600_52316800
ES.10707.10	chr14	+	4349	19	NNC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-428	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	4.63381292481928	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCTAGAAATGGTTAGT	NA	False	NA	NA	False	AGTAAA	-8	NA	52351808	52398788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242_52371317_52374136_52374276_52376195_52376360_52378012_52378157_52378579_52378731_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.11	chr14	+	2541	8	NNC	ENSMUSG00000057132.17	novel	1826	8	NA	NA	-428	389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3.52252228741084	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	52351808	52372708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52352004_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242
ES.10707.12	chr14	+	11667	6	NNC	ENSMUSG00000057132.17	novel	1826	8	NA	NA	-427	389	intron_retention	FALSE	non_canonical	0	0	junction_3	4.14728827066554	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	52351809	52372708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52358030_52358449_52358579_52363735_52363950_52364130_52365198_52366191_52368763_52371242
ES.10707.13	chr14	+	1206	7	NNC	ENSMUSG00000057132.17	novel	1826	8	NA	NA	-416	-5054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.24893144826965	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTTTCTAATAAGGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	52351820	52367265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52352016_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363842_52366970
ES.10707.14	chr14	+	2279	1	Intergenic	novelGene_8975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52353653	52355932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52353700_52355900
ES.10707.15	chr14	+	3894	22	NNC	ENSMUSG00000057132.17	novel	3212	12	NA	NA	-1346	4	intron_retention	FALSE	non_canonical	0	0	junction_1	4.96153001052614	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCCTGTGCTATCTTG	NA	False	NA	NA	False	TATAAA	-23	NA	52355087	52397757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52355126_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242_52371317_52374114_52374276_52376195_52376360_52378012_52378157_52378579_52378731_52382489_52382943_52383188_52383341_52384666_52385010_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.16	chr14	+	5824	21	NNC	ENSMUSG00000057132.17	novel	3212	12	NA	NA	-85	-885	intron_retention	FALSE	non_canonical	0	0	junction_1	4.91833305094318	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGACAAATTTTTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	52356348	52400118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52356409_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242_52371317_52374114_52374276_52376195_52376360_52378012_52378157_52378579_52378731_52383188_52383341_52384666_52385010_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.17	chr14	+	1609	9	NNC	ENSMUSG00000057132.17	novel	757	8	NA	NA	-25	-1325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.63790805271381	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTTTTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	52356408	52376726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52356536_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242_52371317_52374136_52374276_52376195
ES.10707.18	chr14	+	3101	1	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-6875	-2105	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52367113	52370214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52367100_52370200
ES.10707.19	chr14	+	3971	2	ISM	ENSMUSG00000057132.17	ENSMUST00000181297.8	902	5	4024	4455	3979	4355	internal_fragment	FALSE	canonical	3	7	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTTCCGTTTATCC	NA	False	NA	NA	False	AATAAA	-23	NA	52378012	52382406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52378157_52378579
ES.10707.2	chr14	+	174	2	Antisense	novelGene_ENSMUSG00000035726.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTATTATGAAACA	NA	False	NA	NA	False	NA	NA	NA	52316596	52431438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52316721_52431388
ES.10707.20	chr14	+	4132	9	ISM	ENSMUSG00000057132.17	ENSMUST00000180901.8	3212	12	4402	-1323	-4385	-885	3prime_fragment	FALSE	canonical	0	0	junction_1	4.58087055045217	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGACAAATTTTTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	52378435	52400118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52378731_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.21	chr14	+	3136	11	NNC	ENSMUSG00000057132.17	novel	966	7	NA	NA	-4362	-4	intron_retention	FALSE	canonical	0	0	junction_1	5.62227711874824	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGAAATGGTTAGTGGT	NA	False	NA	NA	False	AGTAAA	-11	NA	52378458	52398791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52378481_52378579_52378731_52382489_52382943_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.22	chr14	+	1943	6	NIC	ENSMUSG00000057132.17	novel	3963	24	NA	NA	-4339	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.19523539268061	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAGTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52378481	52398764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52378698_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.23	chr14	+	2998	8	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-4339	0	intron_retention	FALSE	canonical	0	0	junction_1	4.16496563917521	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAGTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52378481	52398764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52378731_52386672_52387089_52387344_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.24	chr14	+	5847	8	NNC	ENSMUSG00000057132.17	novel	3212	12	NA	NA	-4308	1028	intron_retention	FALSE	non_canonical	0	0	junction_1	5.948760803902	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAACTTCTGTATTTTC	NA	False	NA	NA	False	ACTAAA	-19	NA	52378512	52402031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52378731_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52397552
ES.10707.25	chr14	+	1616	9	ISM	ENSMUSG00000057132.17	ENSMUST00000180901.8	3212	12	4550	1045	-4237	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	4.58087055045217	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAACCTGGTCTCCTGTGC	NA	False	NA	NA	False	TATAAA	-16	NA	52378583	52397750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52378731_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.26	chr14	+	1558	9	NNC	ENSMUSG00000057132.17	novel	7878	22	NA	NA	-3407	6	intron_retention	TRUE	canonical	0	0	junction_1	4.58087055045217	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTGTGCTATCTTGCT	NA	False	NA	NA	False	TATAAA	-25	NA	52379413	52397759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52379494_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.27	chr14	+	2696	1	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	-2506	-3753	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTTCTGGTAATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	52380314	52383010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52380300_52383000
ES.10707.28	chr14	+	4730	9	NNC	ENSMUSG00000057132.17	novel	3963	24	NA	NA	-988	2	intron_retention	FALSE	canonical	0	0	junction_3	4.65698400254929	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGTGCTATCT	NA	False	NA	NA	False	TATAAA	-21	NA	52381832	52397755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52385010_52386672_52387089_52387344_52387549_52387735_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.29	chr14	+	180	1	Intergenic	novelGene_8978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATCTAATATT	NA	False	NA	NA	False	NA	NA	NA	52384103	52384283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52384100_52384300
ES.10707.3	chr14	+	1148	1	Intergenic	novelGene_8970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAAAAAAGAGACAA	NA	False	NA	NA	False	CATAAA	-19	NA	52319855	52321003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52319900_52321000
ES.10707.30	chr14	+	1488	2	NNC	ENSMUSG00000057132.17	novel	834	2	NA	NA	14	-728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	52384470	52386035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52385436_52385512
ES.10707.31	chr14	+	1938	8	ISM	ENSMUSG00000057132.17	ENSMUST00000180901.8	3212	12	12806	409	-135	-378	3prime_fragment	FALSE	canonical	2	7	junction_1	2.97609523657138	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52386839	52398386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ES.10707.32	chr14	+	1358	1	NIC	ENSMUSG00000057132.17	novel	5380	25	NA	NA	1149	-350	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACGAGTGCCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	52397056	52398414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52397100_52398400
ES.10707.33	chr14	+	4036	1	Antisense	novelGene_ENSMUSG00000035726.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATATCACGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	52413338	52417374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52413300_52417400
ES.10707.34	chr14	+	4048	2	Antisense	novelGene_ENSMUSG00000035726.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGGGGAAAGGGACA	NA	False	NA	NA	False	NA	NA	NA	52424406	52428516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52428172_52428233
ES.10707.35	chr14	+	157	1	Intergenic	novelGene_8983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATAAATAAATCTTT	3320	False	NA	NA	False	NA	NA	NA	52431261	52431418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52431300_52431400
ES.10707.4	chr14	+	233	1	Intergenic	novelGene_8971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATACACATGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	52321091	52321324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52321100_52321300
ES.10707.5	chr14	+	2071	1	Intergenic	novelGene_8972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCAGCCTTACCCTG	NA	False	NA	NA	False	ACTAAA	-25	NA	52324225	52326296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52324200_52326300
ES.10707.6	chr14	+	178	2	Antisense	novelGene_ENSMUSG00000035726.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	363	junction_1	0	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTATTATGAAACA	1271	False	NA	NA	False	NA	NA	NA	52329380	52431438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52329433_52431312
ES.10707.7	chr14	+	5173	1	Antisense	novelGene_ENSMUSG00000060373.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGCCAGGAGTGGT	6140	False	NA	NA	False	NA	NA	NA	52334249	52339422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52334200_52339400
ES.10707.8	chr14	+	1378	10	NNC	ENSMUSG00000057132.17	novel	3963	24	NA	NA	-6416	444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.70518488900735	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCATTCATCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	52341744	52372763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52341835_52349597_52349687_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363852_52368608_52368763_52371242_52371317_52372518
ES.10707.9	chr14	+	199	1	Intergenic	novelGene_8973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGAGTACACTGTAGCT	NA	False	NA	16	True	NA	NA	NA	52350427	52350626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52350400_52350600
ES.10708.1	chr14	+	5008	4	NNC	ENSMUSG00000097533.3	novel	643	3	NA	NA	-773	-3668	intron_retention	FALSE	canonical	0	0	junction_1	1.88561808316413	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTCATGGTGTTTC	6244	False	NA	NA	False	NA	NA	NA	52434185	52446995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52434330_52439496_52439748_52442282_52442453_52442552
ES.10708.2	chr14	+	1575	6	NNC	ENSMUSG00000097533.3	novel	1277	4	NA	NA	13	3	intron_retention	FALSE	canonical	0	0	junction_1	1.54919333848297	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACCGTGGTCATGGTAT	7030	False	NA	NA	False	NA	NA	NA	52434971	52451312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52435009_52439496_52439748_52442282_52442453_52442552_52442594_52443037_52443121_52450319
ES.10708.3	chr14	+	4895	4	NNC	ENSMUSG00000097533.3	novel	643	3	NA	NA	13	-3674	intron_retention	FALSE	canonical	0	0	junction_1	1.88561808316413	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCTTTTGGTCATGG	7030	False	NA	NA	False	NA	NA	NA	52434971	52446989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52435009_52439496_52439748_52442282_52442453_52442552
ES.10708.4	chr14	+	3465	1	Genic_Genomic	ENSMUSG00000097533.3	novel	NA	NA	NA	NA	8231	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGTGGTCATGGTATTT	NA	False	NA	NA	False	NA	NA	NA	52447849	52451314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_52447800_52451300
ES.10709.1	chr14	+	2794	1	Antisense	novelGene_ENSMUSG00000053754.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTTAAAAGTA	NA	False	NA	NA	False	AAAAAG	-10	NA	52455192	52457986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52455200_52458000
ES.1071.1	chr1	+	515	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAACCAAA	7535	False	NA	NA	False	NA	NA	NA	93727190	93727705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93727200_93727700
ES.10710.1	chr14	-	3073	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-12	-444	-10	276	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGAGATTTTGTTCATT	8736	False	NA	NA	False	NA	NA	NA	52341474	52310557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.100	chr14	-	1605	10	NIC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1463.29137710881	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8735	False	NA	42	True	AATAAA	-18	NA	52341475	52312255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.101	chr14	-	1300	8	NNC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	126	junction_4	1313.49222941542	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8755	False	NA	42	True	AATAAA	-18	NA	52341455	52312255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315012_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.102	chr14	-	1227	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1337.90924313166	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8749	False	NA	42	True	AATAAA	-18	NA	52341461	52312255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.103	chr14	-	2629	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	157	junction_7	1589.25125484311	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8748	False	NA	41	True	AATAAA	-17	NA	52341462	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.104	chr14	-	3067	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	157	junction_7	1610.44522934954	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8739	False	NA	41	True	AATAAA	-17	NA	52341471	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.105	chr14	-	2264	10	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	13	junction_7	1655.59254992224	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8754	False	NA	41	True	AATAAA	-17	NA	52341456	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334771_52335498_52335772_52336002_52341345
ES.10710.106	chr14	-	4228	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	157	junction_7	1587.25710017023	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8755	False	NA	41	True	AATAAA	-17	NA	52341455	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.107	chr14	-	1392	8	NNC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1537.42788116904	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8755	False	NA	41	True	AATAAA	-17	NA	52341455	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312918_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.108	chr14	-	2597	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	157	junction_8	1603.03828225498	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8749	False	NA	41	True	AATAAA	-17	NA	52341461	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.109	chr14	-	2570	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	157	junction_8	1608.14391749464	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8755	False	NA	41	True	AATAAA	-17	NA	52341455	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.11	chr14	-	2752	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-30	-1421	0	-1	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTTGGTATATACATC	8754	False	NA	-32	True	AATAAA	-21	NA	52341456	52310834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.110	chr14	-	1385	10	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	1500.17288715602	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8752	False	NA	41	True	AATAAA	-17	NA	52341458	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341037_52341086_52341345
ES.10710.111	chr14	-	2552	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228232.2	2535	9	-15	-2	9	-1	multi-exon	FALSE	canonical	3	157	junction_8	1522.21910380865	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8734	False	NA	41	True	AATAAA	-17	NA	52341476	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.113	chr14	-	1383	9	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1266.77251682179	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8748	False	NA	41	True	AATAAA	-17	NA	52341462	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312915_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.114	chr14	-	1857	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	157	junction_8	1271.17308026877	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8736	False	NA	41	True	AATAAA	-17	NA	52341474	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52336002_52341345
ES.10710.115	chr14	-	1284	8	Fusion	ENSMUSG00000060373.16_ENSMUSG00000053754.15	novel	1301	8	NA	NA	12	-1	multi-exon	FALSE	canonical	0	0	junction_7	1358.28724682887	3159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	9254	False	NA	41	True	AATAAA	-17	NA	52481954	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52481889
ES.10710.116	chr14	-	1329	8	NNC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1529.61586480971	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8754	False	NA	41	True	AATAAA	-17	NA	52341456	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321872_52341345
ES.10710.118	chr14	-	1473	9	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1584.88252226309	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8758	False	NA	41	True	AATAAA	-17	NA	52341452	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52329616_52329785_52341345
ES.10710.119	chr14	-	1896	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	9	-1	intron_retention	FALSE	canonical	3	1744	junction_2	910.892139496175	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8734	False	NA	41	True	AATAAA	-17	NA	52341476	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.12	chr14	-	2734	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATAGTTGGTATATACA	8749	False	NA	-34	True	AATAAA	-19	NA	52341461	52310836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.121	chr14	-	2735	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	157	junction_7	1588.13430522377	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8748	False	NA	41	True	AATAAA	-17	NA	52341462	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.122	chr14	-	3079	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	157	junction_7	1602.25482698984	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	8748	False	NA	41	True	AATAAA	-17	NA	52341462	52312256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.123	chr14	-	1622	10	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1535.83615381265	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTGTCTCCAAAATA	8755	False	NA	40	True	AATAAA	-16	NA	52341455	52312257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.124	chr14	-	1322	8	NNC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1335.67515603495	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTGTCTCCAAAATA	8755	False	NA	40	True	AATAAA	-16	NA	52341455	52312257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318722_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.125	chr14	-	4403	7	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	157	junction_6	1689.67022587907	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTGTCTCCAAAATA	8755	False	NA	40	True	AATAAA	-16	NA	52341455	52312257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.126	chr14	-	1376	8	NNC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1360.46509154264	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTGTCTCCAAAATA	8731	False	NA	40	True	AATAAA	-16	NA	52341479	52312257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312918_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.127	chr14	-	1779	10	NNC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	1543.01809435475	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACTGTCTCCAAAATA	8748	False	NA	40	True	AATAAA	-16	NA	52341462	52312257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335669_52335772_52336002_52341345
ES.10710.128	chr14	-	5037	3	NNC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	17472	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2055.5	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	NA	False	NA	39	True	AATAAA	-15	NA	52317604	52312258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52316592_52316806
ES.10710.13	chr14	-	2770	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCATAGTTGGTATAT	8749	False	NA	-37	True	AATAAA	-16	NA	52341461	52310839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.130	chr14	-	189	1	Intergenic	novelGene_8974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGTCATCCTTGATGT	NA	False	NA	NA	False	NA	NA	NA	52352547	52352358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52352400_52352500
ES.10710.131	chr14	-	199	1	Intergenic	novelGene_8976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	6534	False	NA	NA	False	NA	NA	NA	52363174	52362975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52363000_52363200
ES.10710.132	chr14	-	237	1	Intergenic	novelGene_8977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATACCACTTAAC	2096	False	NA	NA	False	AGTAAA	-29	NA	52367612	52367375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52367400_52367600
ES.10710.133	chr14	-	179	1	Intergenic	novelGene_8979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	52391650	52391471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52391500_52391600
ES.10710.134	chr14	-	175	1	Intergenic	novelGene_8980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAAAAGAGCCG	NA	False	NA	NA	False	NA	NA	NA	52394978	52394803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52394800_52395000
ES.10710.135	chr14	-	1457	2	Antisense	novelGene_ENSMUSG00000057132.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAATAGCTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	52397558	52395190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_52395542_52396452
ES.10710.136	chr14	-	4751	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	-74	-4	-74	4	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTATGACCATTTCTTT	NA	False	NA	3	True	AATAAA	-44	NA	52434947	52397866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.137	chr14	-	4413	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	174	1	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_23	233.216205268845	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTCTTATGACCATTTC	NA	False	NA	0	True	AATAAA	-41	NA	52434699	52397869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420555_52420640_52421384_52421478_52434541
ES.10710.139	chr14	-	7054	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	10474	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	236.77262003872	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52424399	52397870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52423220_52423428
ES.10710.14	chr14	-	2994	10	NNC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	1537.71531665056	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTTTCATAGTTGGTAT	8734	False	NA	-39	True	AATAAA	-14	NA	52341476	52310841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52335837_52336002_52341345
ES.10710.140	chr14	-	4517	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	236.220236220354	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434964	52397870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434788
ES.10710.142	chr14	-	2618	11	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	346.506984056599	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434679	52397870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408306_52418478_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.143	chr14	-	4348	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	241.779327188152	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434695	52397870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.146	chr14	-	5004	24	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-12	0	intron_retention	FALSE	canonical	3	979	junction_19	84.7519677072205	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434885	52397870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.149	chr14	-	4473	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	182	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	237.606565565853	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTCTCTTATGACCAT	NA	False	NA	-3	True	AATAAA	-38	NA	52434691	52397872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411345_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.15	chr14	-	2723	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-85	9	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1401.10168023857	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGTGTGTACAAAATGC	8640	False	NA	-29	True	AATAAA	-28	NA	52341570	52310992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.151	chr14	-	4524	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	173	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	237.942850281323	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTCTTATGACCA	NA	False	NA	-4	True	AATAAA	-37	NA	52434700	52397873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414529_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.158	chr14	-	4303	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	-5	combination_of_known_splicesites	FALSE	canonical	1	14	junction_23	239.907953992545	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434679	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52421384_52421478_52434541
ES.10710.159	chr14	-	5742	24	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	12	-5	intron_retention	FALSE	canonical	3	979	junction_19	81.1671942446583	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434861	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.16	chr14	-	2654	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-29	-8	-6	8	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGTGTGTACAAAATG	8719	False	NA	-30	True	AATAAA	-27	NA	52341491	52310993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.162	chr14	-	4713	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	178	-5	intron_retention	FALSE	canonical	3	979	junction_20	83.3119034945721	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434695	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.163	chr14	-	4427	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	262	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	238.05058286003	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434611	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419162_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.165	chr14	-	4503	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	195	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	236.774201297354	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434678	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418656_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.169	chr14	-	4559	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-17	-5	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	237.484294071325	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434890	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.17	chr14	-	2657	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-20	-139	9	8	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGTGTGTACAAAATG	8734	False	NA	-30	True	AATAAA	-27	NA	52341476	52310993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.171	chr14	-	4440	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	240	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	236.115056699059	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	NA	False	NA	-6	True	AATAAA	-35	NA	52434633	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401866_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.172	chr14	-	4902	14	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-15463	-5	intron_retention	FALSE	canonical	3	1017	junction_9	79.9007520459901	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTGTCTCTTATGAC	1256	False	NA	-6	True	AATAAA	-35	NA	52416050	52397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52414502_52414611_52414678_52415500
ES.10710.176	chr14	-	3695	21	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	193	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.20728829718	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTTTGTAAACTTG	NA	False	NA	-17	True	AATAAA	-24	NA	52434680	52397886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400704_52411014_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.177	chr14	-	4390	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	176	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	237.157615100169	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTTTTTGTAAA	NA	False	NA	-21	True	AATAAA	-20	NA	52434697	52397890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52411014_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.179	chr14	-	4272	25	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	163	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	242.546902680698	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTTTGT	NA	False	NA	-24	True	AATAAA	-17	NA	52434710	52397893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52421428_52421478_52434541
ES.10710.18	chr14	-	3177	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-10	7	intron_retention	FALSE	canonical	3	1744	junction_2	910.892139496175	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8715	False	NA	-31	True	AATAAA	-26	NA	52341495	52310994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.180	chr14	-	5331	25	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	178	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	241.267108633426	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTTTG	NA	False	NA	-25	True	AATAAA	-16	NA	52434695	52397894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418622_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.185	chr14	-	5947	24	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	174	-25	intron_retention	FALSE	canonical	1	38	junction_3	237.674739220465	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434699	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401883_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.186	chr14	-	4340	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	178	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	240.951409203645	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434695	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.187	chr14	-	4755	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-11	-25	intron_retention	FALSE	canonical	3	979	junction_20	83.921093891822	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434884	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.188	chr14	-	4822	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	-25	intron_retention	FALSE	canonical	3	989	junction_17	77.4526625143097	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434679	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.19	chr14	-	6025	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	7	intron_retention	FALSE	canonical	3	157	junction_7	1542.06168647624	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGGTGTGTACAAAAT	8755	False	NA	-31	True	AATAAA	-26	NA	52341455	52310994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52321849_52334778_52336002_52341345
ES.10710.191	chr14	-	4553	27	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-29	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.515099672693	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434902	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399014_52399137_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.193	chr14	-	4448	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	-25	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	235.318725136781	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434679	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414177_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.194	chr14	-	4423	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	218	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	236.77262003872	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434655	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421471_52434541
ES.10710.195	chr14	-	4488	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	178	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	238.05058286003	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTT	NA	False	NA	-26	True	AATAAA	-15	NA	52434695	52397895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419595_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.197	chr14	-	4467	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	169	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	237.230520802025	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434704	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411032_52411229_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.198	chr14	-	4456	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	185	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	238.126870386355	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434688	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414496_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.2	chr14	-	3090	9	NNC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-15	273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1303.37763138701	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTGAGATTTTGTTC	8710	False	NA	NA	False	NA	NA	NA	52341500	52310560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319290_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.20	chr14	-	2636	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-75	-1260	-16	6	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8709	False	NA	-32	True	AATAAA	-25	NA	52341501	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.200	chr14	-	4161	24	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-17	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	246.397069925868	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434890	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419775_52434788
ES.10710.202	chr14	-	4440	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	238.093709282711	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434679	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409917_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.204	chr14	-	4402	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	194	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	237.646783272991	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434679	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419779_52420531_52420640_52421384_52421478_52434541
ES.10710.21	chr14	-	2781	10	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	1465.50247566247	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8754	False	NA	-32	True	AATAAA	-25	NA	52341456	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335837_52336002_52341345
ES.10710.210	chr14	-	4553	27	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-11	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	233.515099672693	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	-27	True	AATAAA	-14	NA	52434884	52397896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541_52434747_52434851
ES.10710.213	chr14	-	4407	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	210	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	319.220385313971	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	-28	True	AATAAA	-13	NA	52434663	52397897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414079_52414177_52414415_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.214	chr14	-	4398	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	241	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	237.81520220541	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	-28	True	AATAAA	-13	NA	52434632	52397897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417724_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.215	chr14	-	4295	25	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	13403	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	322.266183543287	1424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTT	NA	False	NA	-29	True	AATAAA	-12	NA	52421470	52397898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412819_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420471_52420640_52421384
ES.10710.216	chr14	-	4463	26	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	170	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	320.384983418387	1427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTT	NA	False	NA	-29	True	AATAAA	-12	NA	52434703	52397898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414071_52414183_52414405_52414502_52414611_52414678_52415500_52415607_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.217	chr14	-	3893	24	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	15169	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.397069925868	1424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAATAAACTGGGATTT	NA	False	NA	-51	True	ACTAAA	-1	NA	52419704	52397920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52398028_52398099_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613
ES.10710.218	chr14	-	3924	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	194	555	194	-555	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGGCTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	52434679	52398425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.219	chr14	-	3506	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	-4	1171	-4	134	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCCATTTGTGTTTAT	NA	False	NA	2	True	NA	NA	NA	52434877	52399041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.222	chr14	-	3796	25	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	145	105	intron_retention	FALSE	canonical	1	38	junction_3	233.719383021606	1401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTTTTCCTTTTGGT	NA	False	NA	-27	True	NA	NA	NA	52434728	52399070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401883_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.223	chr14	-	175	1	Intergenic	novelGene_8981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGTTATTGG	6461	False	NA	NA	False	NA	NA	NA	52404578	52404403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52404400_52404600
ES.10710.224	chr14	-	4246	15	NNC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	-15228	-6258	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	307.455886996785	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAATGTTTTGCTTA	1491	False	NA	NA	False	TTTAAA	-29	NA	52415815	52405433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52406880_52407098_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740
ES.10710.225	chr14	-	178	1	Intergenic	novelGene_8982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9981	False	NA	NA	False	NA	NA	NA	52407325	52407147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52407100_52407300
ES.10710.226	chr14	-	1556	8	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	257	18559	257	-17254	5prime_fragment	FALSE	canonical	3	979	junction_3	74.9699259431298	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACTTTTTTGTTTGTT	NA	False	NA	NA	False	AAAACA	-29	NA	52434616	52416429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ES.10710.227	chr14	-	4216	17	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	24121	-203	-428	203	3prime_fragment	FALSE	canonical	3	26	junction_15	9.64992713703062	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTACTTCACATTCT	NA	False	NA	NA	False	GATAAA	-15	NA	52450908	52435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709
ES.10710.228	chr14	-	4507	21	NNC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.62305031922	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTATGTTCTGTTT	NA	False	NA	-6	True	AATAAA	-20	NA	52453415	52435604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444474_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339
ES.10710.23	chr14	-	2589	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	10	6	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8735	False	NA	-32	True	AATAAA	-25	NA	52341475	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.230	chr14	-	3594	8	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	-124	3	intron_retention	FALSE	canonical	2	3	junction_2	17.6126114370542	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTATGTTCTGTTT	NA	False	NA	-6	True	AATAAA	-20	NA	52445284	52435604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307
ES.10710.231	chr14	-	8564	38	FSM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	-55	0	-55	0	multi-exon	FALSE	canonical	3	26	junction_15	11.5591027376411	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	376	False	NA	-9	True	AATAAA	-17	NA	52495292	52435607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.233	chr14	-	8457	38	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	12.4723214376991	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	507	False	NA	-9	True	AATAAA	-17	NA	52495161	52435607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450201_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.234	chr14	-	4631	12	NNC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	-2191	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	15.6806982472293	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTCTTCCTATGTTCT	NA	False	NA	-10	True	AATAAA	-16	NA	52447351	52435608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52445852
ES.10710.236	chr14	-	3630	11	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	2433	-4	intron_retention	FALSE	canonical	3	42	junction_2	5.44426303552648	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCATTCTTCCTATGT	NA	False	NA	-13	True	AATAAA	-13	NA	52448047	52435611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942
ES.10710.237	chr14	-	3134	14	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	426	121	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	14.451305708703	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGAGCAGCTGGTGTG	NA	False	NA	NA	False	AATAAA	-33	NA	52450054	52435785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019
ES.10710.238	chr14	-	8254	37	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	-219	120	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	12.1455931143261	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTAGAGCAGCTGGTGT	NA	False	NA	NA	False	AATAAA	-32	NA	52475248	52435786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450201_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186
ES.10710.239	chr14	-	4119	19	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	22924	183	-156	116	3prime_fragment	FALSE	canonical	3	26	junction_15	9.92331709773613	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGCTTAGAGCAGCTG	NA	False	NA	NA	False	AATAAA	-28	NA	52452105	52435790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925
ES.10710.24	chr14	-	2642	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8742	False	NA	-32	True	AATAAA	-25	NA	52341468	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.242	chr14	-	8584	37	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	-23	16	intron_retention	FALSE	canonical	1	1	junction_27	14.7629415918524	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACCCAATTGCTCCCA	408	False	NA	NA	False	NA	NA	NA	52495260	52435890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450201_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52461976_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.243	chr14	-	8201	38	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	23	16	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	12.8934499596762	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACCCAATTGCTCCCA	9265	False	NA	NA	False	NA	NA	NA	52481943	52435890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450201_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481889
ES.10710.244	chr14	-	1694	5	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	-288	0	intron_retention	FALSE	canonical	2	3	junction_2	22.59424705539	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	52442372	52435932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52436610_52439087_52439205_52439960_52440075_52441333_52441637_52441889
ES.10710.245	chr14	-	9179	37	ISM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	-35	1843	-35	-228	5prime_fragment	FALSE	canonical	3	26	junction_14	11.6903199377482	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTAGAGGTTTGTGTGT	396	False	NA	NA	False	AATAAA	-44	NA	52495272	52437450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.246	chr14	-	1717	1	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	684	28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGGAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	52442870	52441153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52441200_52442900
ES.10710.247	chr14	-	10126	5	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	3834	-1359	intron_retention	FALSE	canonical	3	34	junction_1	17.3403431338598	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	52460284	52446651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52450907_52451669_52453910_52455172_52455429_52455629_52455774_52457053
ES.10710.248	chr14	-	7285	26	NIC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	-142	-1360	intron_retention	FALSE	canonical	3	26	junction_3	13.1706340014443	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAAAAAATG	289	False	NA	NA	False	NA	NA	NA	52495379	52446652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52448073_52449272_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.249	chr14	-	6416	25	NNC	ENSMUSG00000053754.15	novel	8509	38	NA	NA	11	1523	intron_retention	FALSE	canonical	0	0	junction_12	16.436536199036	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCTTGAGAAATCTAAT	9253	False	NA	NA	False	AATAAA	-14	NA	52481955	52448733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457418_52458366_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481889
ES.10710.25	chr14	-	2565	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1301.76539470718	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8737	False	NA	-32	True	AATAAA	-25	NA	52341473	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312733_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.250	chr14	-	3595	16	ISM	ENSMUSG00000053754.15	ENSMUST00000200169.6	8509	38	16	19586	16	-2780	5prime_fragment	FALSE	canonical	3	27	junction_15	11.5750689942748	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCCGTACCTCATCAAT	447	False	NA	NA	False	NA	NA	NA	52495221	52455193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52495134
ES.10710.251	chr14	-	4602	1	NIC	ENSMUSG00000053754.15	novel	8190	37	NA	NA	3626	-3477	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52460492	52455890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52455900_52460500
ES.10710.252	chr14	-	3130	2	Genic_Genomic	ENSMUSG00000053754.15	novel	360	2	NA	NA	25	-3273	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAACCAACCAACC	9267	False	NA	NA	False	NA	NA	NA	52481941	52478235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_52479295_52479870
ES.10710.253	chr14	-	2432	1	Intergenic	novelGene_8984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9490	False	NA	NA	False	NA	NA	NA	52481718	52479286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52479300_52481700
ES.10710.254	chr14	-	3326	1	FSM	ENSMUSG00000053754.15	ENSMUST00000199135.2	3329	1	35	-32	35	32	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGGTAAATAAATA	523	False	NA	NA	False	NA	NA	NA	52495145	52491819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52491800_52495100
ES.10710.26	chr14	-	2467	9	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1333.42462643188	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGGTGTGTACAAAA	8748	False	NA	-32	True	AATAAA	-25	NA	52341462	52310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52311752_52311860_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.28	chr14	-	2718	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	-34	163	-34	5	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCTGGTGTGTACAAA	8691	False	NA	-33	True	AATAAA	-24	NA	52341519	52310996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.29	chr14	-	3856	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-16	3	intron_retention	FALSE	canonical	3	157	junction_8	1513.80290989283	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGAAGCTGGTGTGTACA	8709	False	NA	-35	True	AATAAA	-22	NA	52341501	52310998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.3	chr14	-	3031	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-35	-1305	-14	230	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACAGGTTTATTCCAC	8711	False	NA	NA	False	ATTAAA	-33	NA	52341499	52310603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.30	chr14	-	2863	10	NIC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1560.5251964928	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGAAGCTGGTGTGTAC	8709	False	NA	-36	True	AATAAA	-21	NA	52341501	52310999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.31	chr14	-	3827	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	1	2	intron_retention	FALSE	canonical	3	157	junction_8	1608.14391749464	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGAAGCTGGTGTGTAC	8755	False	NA	-36	True	AATAAA	-21	NA	52341455	52310999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.32	chr14	-	2841	10	NIC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1463.29137710881	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGAAGCTGGTGTGTAC	8755	False	NA	-36	True	AATAAA	-21	NA	52341455	52310999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.33	chr14	-	3788	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228232.2	2535	9	6	-1259	1	2	multi-exon	FALSE	canonical	3	157	junction_8	1522.21910380865	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGAAGCTGGTGTGTAC	8755	False	NA	-36	True	AATAAA	-21	NA	52341455	52310999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.34	chr14	-	3638	5	NIC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	14452	1	intron_retention	FALSE	canonical	3	3077	junction_4	411.911018910638	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAGAAGCTGGTGTGTA	7837	False	NA	-37	True	AATAAA	-20	NA	52320624	52311000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52313184_52314859_52315021_52318716_52318765_52319284
ES.10710.35	chr14	-	3866	9	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	9	-1	intron_retention	FALSE	canonical	3	157	junction_8	1603.03828225498	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTAGAAGCTGGTGTG	8734	False	NA	-39	True	AATAAA	-18	NA	52341476	52311002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.37	chr14	-	3830	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-14	-4	intron_retention	FALSE	canonical	1	13	junction_7	1652.02034926178	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTGTTAGAAGCTGGT	8711	False	NA	-42	True	AATAAA	-15	NA	52341499	52311005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334771_52336002_52341345
ES.10710.38	chr14	-	2602	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-10	-901	-10	-6	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8736	False	NA	-44	True	AATAAA	-13	NA	52341474	52311007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.4	chr14	-	2561	6	NIC	ENSMUSG00000060373.16	novel	2843	8	NA	NA	15761	226	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1527.76655284765	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTCACAGGTTTATT	9146	False	NA	NA	False	ATTAAA	-29	NA	52319315	52310607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319245
ES.10710.42	chr14	-	3114	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	3	-6	intron_retention	FALSE	canonical	3	157	junction_8	1271.17308026877	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8728	False	NA	-44	True	AATAAA	-13	NA	52341482	52311007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52336002_52341345
ES.10710.43	chr14	-	2646	9	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1266.77251682179	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8737	False	NA	-44	True	AATAAA	-13	NA	52341473	52311007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312918_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.45	chr14	-	2577	9	NNC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	1301.99250549878	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	8754	False	NA	-44	True	AATAAA	-13	NA	52341456	52311007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321842_52335471_52335498_52341345
ES.10710.47	chr14	-	2597	9	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	169	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	1298.48882720453	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGCTGTTAGAAGCT	8953	False	NA	-45	True	AATAAA	-12	NA	52341257	52311008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341153
ES.10710.48	chr14	-	2601	8	NNC	ENSMUSG00000060373.16	novel	2843	8	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1668.56824852926	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAATATGCTGTTAGAA	8755	False	NA	-48	True	AATAAA	-9	NA	52341455	52311011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319280_52319361_52321571_52321872_52341345
ES.10710.49	chr14	-	2135	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	5	707	5	368	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGCCTCAAAAGTTT	8730	False	NA	NA	False	ATTAAA	-26	NA	52341480	52311540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.5	chr14	-	3026	10	NIC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	1	19	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1463.29137710881	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAGACTCAGGAGCCT	8755	False	NA	-12	True	AATAAA	-41	NA	52341455	52310814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.50	chr14	-	2019	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	296	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTTTTGACACGGAG	8748	False	NA	NA	False	AATAAA	-27	NA	52341462	52311612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.51	chr14	-	1964	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	13	-286	-1	286	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTAACTTTAAATATTTT	8759	False	NA	NA	False	AATAAA	-17	NA	52341451	52311622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.52	chr14	-	3167	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	285	intron_retention	FALSE	canonical	3	157	junction_8	1624.95249449792	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTAACTTTAAATATTT	8749	False	NA	NA	False	AATAAA	-16	NA	52341461	52311623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.53	chr14	-	1939	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-3	285	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTAACTTTAAATATTT	8757	False	NA	NA	False	AATAAA	-16	NA	52341453	52311623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.54	chr14	-	3206	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	9	285	intron_retention	FALSE	canonical	3	157	junction_8	1513.80290989283	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTAACTTTAAATATTT	8734	False	NA	NA	False	AATAAA	-16	NA	52341476	52311623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.55	chr14	-	1851	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-131	897	-108	10	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAATTTTTTTTTTTC	8617	False	NA	-7	True	AATAAA	-31	NA	52341593	52311898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.56	chr14	-	1782	9	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	-16	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1266.77251682179	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACAATTTTTTTTTTT	8709	False	NA	-8	True	AATAAA	-30	NA	52341501	52311899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312918_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.57	chr14	-	3406	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-3	2	intron_retention	FALSE	canonical	1	13	junction_6	1642.15084196157	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAGGAAAGACAATTTT	8757	False	NA	-15	True	AATAAA	-23	NA	52341453	52311906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52334771_52336002_52341345
ES.10710.58	chr14	-	2907	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_8	1513.80290989283	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8748	False	NA	-17	True	AATAAA	-21	NA	52341462	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.59	chr14	-	1703	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-12	0	9	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8734	False	NA	-17	True	AATAAA	-21	NA	52341476	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.6	chr14	-	2763	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	3	-1075	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	8749	False	NA	-31	True	AATAAA	-22	NA	52341461	52310833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.60	chr14	-	1742	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	30	1075	1	0	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8755	False	NA	-17	True	AATAAA	-21	NA	52341455	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.62	chr14	-	1717	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-69	-347	-10	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8715	False	NA	-17	True	AATAAA	-21	NA	52341495	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.63	chr14	-	1677	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8734	False	NA	-17	True	AATAAA	-21	NA	52341476	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.64	chr14	-	1702	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1675.94252495089	1536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8736	False	NA	-17	True	AATAAA	-21	NA	52341474	52311908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319280_52319361_52321571_52321872_52341345
ES.10710.65	chr14	-	1719	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTGAAGGAAAGACAAT	8730	False	NA	-18	True	AATAAA	-20	NA	52341480	52311909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.70	chr14	-	2174	11	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	1684.18964490345	1536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTGAAGGAAAGACAA	8756	False	NA	-19	True	AATAAA	-19	NA	52341454	52311910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52335024_52335471_52335498_52335772_52336002_52341345
ES.10710.72	chr14	-	2918	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228232.2	2535	9	-35	-348	-11	-1	multi-exon	FALSE	canonical	3	157	junction_8	1522.21910380865	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTGAAGGAAAGACAA	8714	False	NA	-19	True	AATAAA	-19	NA	52341496	52311910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.74	chr14	-	1746	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATTTGAAGGAAAGACA	8722	False	NA	-20	True	AATAAA	-18	NA	52341488	52311911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.76	chr14	-	1898	10	NIC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	1560.5251964928	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGGAATTTGAAGGAA	8757	False	NA	-25	True	AATAAA	-13	NA	52341453	52311916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335772_52336002_52341345
ES.10710.77	chr14	-	1732	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-18	784	-10	-7	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGGAATTTGAAGGAA	8736	False	NA	-25	True	AATAAA	-13	NA	52341474	52311916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.78	chr14	-	1559	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-29	-229	1	-117	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTGTAATAGTCTTA	8755	False	NA	NA	False	NA	NA	NA	52341455	52312026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.79	chr14	-	1622	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	32	1193	-3	-117	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTGTAATAGTCTTA	8757	False	NA	NA	False	NA	NA	NA	52341453	52312026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.8	chr14	-	4506	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	157	junction_7	1602.25482698984	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	8744	False	NA	-31	True	AATAAA	-22	NA	52341466	52310833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.80	chr14	-	5518	6	NNC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	4	intron_retention	FALSE	non_canonical	0	0	junction_3	1520.6901064977	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	8748	False	NA	46	True	AATAAA	-22	NA	52341462	52312251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52313184_52314859_52316592_52316806_52319361_52321571_52321849_52341345
ES.10710.82	chr14	-	2597	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	-11	3	intron_retention	FALSE	canonical	3	157	junction_8	1513.80290989283	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8714	False	NA	45	True	AATAAA	-21	NA	52341496	52312252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ES.10710.83	chr14	-	1371	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-24	344	-3	3	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8722	False	NA	45	True	AATAAA	-21	NA	52341488	52312252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.84	chr14	-	1397	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-19	1120	10	3	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCTCCAAAATAATCTC	8735	False	NA	45	True	AATAAA	-21	NA	52341475	52312252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.85	chr14	-	1400	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-35	1252	-12	2	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8713	False	NA	44	True	AATAAA	-20	NA	52341497	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.87	chr14	-	1455	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-152	-2	-93	2	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8632	False	NA	44	True	AATAAA	-20	NA	52341578	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.88	chr14	-	1371	8	NIC	ENSMUSG00000060373.16	novel	2498	9	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8734	False	NA	44	True	AATAAA	-20	NA	52341476	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.9	chr14	-	2855	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-70	-168	-47	0	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	8678	False	NA	-31	True	AATAAA	-22	NA	52341532	52310833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.90	chr14	-	1418	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	9	1420	9	2	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8734	False	NA	44	True	AATAAA	-20	NA	52341476	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ES.10710.92	chr14	-	1307	8	NNC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1301.76539470718	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8736	False	NA	44	True	AATAAA	-20	NA	52341474	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312612_52312728_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.93	chr14	-	1445	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	-44	2	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8681	False	NA	44	True	AATAAA	-20	NA	52341529	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
ES.10710.94	chr14	-	3010	7	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	7	2	intron_retention	FALSE	canonical	3	1620	junction_2	999.100039479976	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8732	False	NA	44	True	AATAAA	-20	NA	52341478	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.95	chr14	-	1352	8	NIC	ENSMUSG00000060373.16	novel	1691	9	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8714	False	NA	44	True	AATAAA	-20	NA	52341496	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ES.10710.96	chr14	-	1499	10	NNC	ENSMUSG00000060373.16	novel	1683	9	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	1562.49337776374	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCTCCAAAATAATCT	8754	False	NA	44	True	AATAAA	-20	NA	52341456	52312253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335837_52336002_52341345
ES.10710.97	chr14	-	1867	7	NIC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	-7	1	intron_retention	FALSE	canonical	3	1725	junction_6	975.829163099544	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTCCAAAATAATC	8739	False	NA	43	True	AATAAA	-19	NA	52341471	52312254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52341345
ES.10711.1	chr14	+	2628	5	Genic_Genomic	ENSMUSG00000105868.2	novel	5417	1	NA	NA	4190	5871	multi-exon	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAATTTGTTCACAATC	NA	False	NA	NA	False	AAAAAG	-14	NA	52500457	52507555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_52501277_52502157_52502224_52503645_52504173_52505058_52506041_52507321
ES.10711.2	chr14	+	161	1	Intergenic	novelGene_8985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	52507320	52507481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52507300_52507500
ES.10712.1	chr14	+	4356	1	FSM	ENSMUSG00000088979.3	ENSMUST00000158354.3	90	1	-4062	-204	-4062	204	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	52509925	52514281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52509900_52514300
ES.10713.1	chr14	+	3508	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	-22	1864	-22	-1864	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGCATAGGCCAATTT	NA	False	NA	33	True	AGTAAA	-45	NA	52516580	52531994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.10	chr14	+	2980	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	2	1114	intron_retention	FALSE	canonical	3	458	junction_3	40.0871499590172	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCGGCCAAAAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	52517023	52530928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.12	chr14	+	3314	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	437	1754	18	-1754	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAAAAGTTTAGAGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	52517039	52532104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.13	chr14	+	2803	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	24	959	intron_retention	FALSE	canonical	3	458	junction_3	40.0871499590172	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	52517045	52530773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.14	chr14	+	2060	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	24	1123	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	192.004783103687	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTTTTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	52517045	52530937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528931_52529676_52529976_52530141_52530657
ES.10713.15	chr14	+	1830	7	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	443	4050	24	-6	internal_fragment	FALSE	canonical	3	458	junction_4	43.6746175967486	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAAATATTAAGAAT	NA	False	NA	NA	False	TATAAA	-9	NA	52517045	52529808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931
ES.10713.16	chr14	+	3998	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	25	-1889	intron_retention	FALSE	canonical	3	458	junction_3	40.0871499590172	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52517046	52531969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.17	chr14	+	2558	8	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-26	-1894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	189.533153634214	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATCTTTTAAATGTG	NA	False	NA	3	True	AGTAAA	-15	NA	52517047	52531964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529495_52530920
ES.10713.18	chr14	+	5846	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-23	-37	intron_retention	FALSE	canonical	3	458	junction_3	40.0871499590172	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATTTTTAA	NA	False	NA	-16	True	NA	NA	NA	52517050	52533821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.19	chr14	+	2199	8	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-22	-1892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	189.533153634214	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTTTTAAATGTGCA	NA	False	NA	5	True	AGTAAA	-17	NA	52517051	52531966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529155_52530937
ES.10713.2	chr14	+	2461	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	-10	2899	-10	1145	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCTTCTGTAGTGCC	NA	False	NA	NA	False	TTTAAA	-5	NA	52516592	52530959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.21	chr14	+	3143	9	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-20	-1893	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	179.791545963652	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATCTTTTAAATGTGC	NA	False	NA	4	True	AGTAAA	-16	NA	52517053	52531965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529994_52530141_52530657
ES.10713.23	chr14	+	3049	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	459	1997	-12	-1997	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTATTTCTTTACCTG	NA	False	NA	NA	False	NA	NA	NA	52517061	52531861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.24	chr14	+	4053	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	472	980	1	-980	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCTGGGATTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	52517074	52532878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.25	chr14	+	3298	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	11	-1889	intron_retention	FALSE	canonical	3	458	junction_3	38.4659934625537	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52517084	52531969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.27	chr14	+	4983	8	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	673	13	87	-13	3prime_fragment	FALSE	canonical	3	458	junction_3	38.4659934625537	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCAAGATTGCAATTCT	NA	False	NA	8	True	AAAAAG	-1	NA	52517275	52533845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.28	chr14	+	2064	8	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	673	2932	87	1112	3prime_fragment	FALSE	canonical	3	458	junction_3	38.4659934625537	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCCGGCCAAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	52517275	52530926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.29	chr14	+	154	1	Intergenic	novelGene_8988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	52519906	52520060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_52519900_52520100
ES.10713.3	chr14	+	3490	10	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	8	-1892	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	171.624122739704	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTTTTAAATGTGCA	NA	False	NA	5	True	AGTAAA	-17	NA	52516610	52531966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52516690_52516804_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.30	chr14	+	2650	7	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	1070	-1894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	200.02888680277	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATCTTTTAAATGTG	NA	False	NA	3	True	AGTAAA	-15	NA	52524260	52531964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657_52531405_52531467
ES.10713.31	chr14	+	4683	5	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	7883	10	1295	-10	3prime_fragment	FALSE	canonical	3	506	junction_1	22.6163657557973	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGATTGCAATTCTAGT	NA	False	NA	11	True	AAAAAG	-4	NA	52524485	52533848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.32	chr14	+	1932	5	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	8154	2490	1566	1554	3prime_fragment	FALSE	canonical	3	506	junction_1	22.6163657557973	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGAACTATTATTGATA	NA	False	NA	NA	False	AATAAA	-19	NA	52524756	52531368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.4	chr14	+	2464	10	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	26	1144	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	171.624122739704	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGGCTTCTGTAGTGC	NA	False	NA	NA	False	TTTAAA	-4	NA	52516628	52530958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52516690_52516804_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.5	chr14	+	4350	7	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-12	-1885	intron_retention	FALSE	canonical	3	506	junction_3	23.2355092237913	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTGCATTCATTT	NA	False	NA	12	True	AGTAAA	-24	NA	52517009	52531973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_52517114_52517277_52517347_52523116_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.6	chr14	+	5095	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	407	3	-12	-3	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAATTCTAGTCTGGTCT	NA	False	NA	18	True	AAAAAG	-11	NA	52517009	52533855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.7	chr14	+	4915	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	407	183	-12	-183	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAGATTGCTTAATAGA	NA	False	NA	17	True	AATAAA	-21	NA	52517009	52533675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.8	chr14	+	3150	9	NNC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	-12	-1894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	182.675087245087	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATCTTTTAAATGTG	NA	False	NA	3	True	AGTAAA	-15	NA	52517009	52531964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524935_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10713.9	chr14	+	4215	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	420	870	1	-870	3prime_fragment	FALSE	canonical	3	458	junction_4	39.6389959509572	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGGTGGTCCTAAGA	NA	False	NA	NA	False	AATACA	-20	NA	52517022	52532988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ES.10714.1	chr14	+	207	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCCACATTTTCATAT	NA	False	NA	NA	False	NA	NA	NA	52534429	52534636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52534400_52534600
ES.10715.1	chr14	+	1538	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTTTGATAGGGACT	NA	False	NA	NA	False	NA	NA	NA	52537808	52539346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52537800_52539300
ES.10716.1	chr14	+	182	1	Antisense	novelGene_ENSMUSG00000022160.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGTGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	52541197	52541379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_52541200_52541400
ES.10717.1	chr14	-	3582	7	NNC	ENSMUSG00000022159.17	novel	2906	8	NA	NA	-22	-1	intron_retention	FALSE	canonical	1	1	junction_4	54.7408033879259	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGTCATTTCTGA	NA	False	NA	0	True	ATTAAA	-26	NA	52516720	52499216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52502225_52503646_52503759_52506098_52506192_52506374_52506536_52512899_52512968_52516370_52516443_52516652
ES.10717.10	chr14	-	2685	8	NNC	ENSMUSG00000022159.17	novel	2906	8	NA	NA	211	0	intron_retention	FALSE	canonical	0	0	junction_5	64.6125027390526	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516487	52499227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52511021_52511118_52512899_52512968_52516370
ES.10717.11	chr14	-	2535	7	ISM	ENSMUSG00000022159.17	ENSMUST00000174020.8	607	8	213	-1931	213	-8	3prime_fragment	FALSE	canonical	2	5	junction_5	51.6196022198286	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATCCAAGCTACTTTTA	NA	False	NA	-19	True	ATTAAA	-7	NA	52516485	52499235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506414_52512899_52512968_52516370
ES.10717.12	chr14	-	158	1	Intergenic	novelGene_8986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	52508018	52507860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52507900_52508000
ES.10717.2	chr14	-	2790	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	114	2	-92	-2	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATGTGTCATTTCTG	NA	False	NA	-1	True	ATTAAA	-25	NA	52516888	52499217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ES.10717.5	chr14	-	3527	6	NIC	ENSMUSG00000022159.17	novel	1573	9	NA	NA	159	0	intron_retention	FALSE	canonical	3	132	junction_4	8.23164625090267	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTATTTCATGTGTCAT	NA	False	NA	-6	True	ATTAAA	-20	NA	52516539	52499222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370
ES.10717.6	chr14	-	2409	5	ISM	ENSMUSG00000022159.17	ENSMUST00000172488.8	475	6	220	-1944	220	0	3prime_fragment	FALSE	canonical	0	0	junction_3	62.6951951907002	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTATTTCATGTGTCAT	NA	False	NA	-6	True	ATTAAA	-20	NA	52516478	52499222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52501275_52502155_52502225_52503646_52503759_52512899_52512968_52516370
ES.10717.7	chr14	-	4916	6	NIC	ENSMUSG00000022159.17	novel	2619	7	NA	NA	-21	0	intron_retention	FALSE	canonical	3	132	junction_3	10.3266645147405	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTTATTTCATGTGT	NA	False	NA	-9	True	ATTAAA	-17	NA	52516719	52499225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ES.10717.8	chr14	-	2619	9	NNC	ENSMUSG00000022159.17	novel	1573	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.3037265643139	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516762	52499227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52500644_52500678_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ES.10717.9	chr14	-	1548	9	FSM	ENSMUSG00000022159.17	ENSMUST00000167116.8	1573	9	20	5	20	0	multi-exon	FALSE	canonical	0	0	junction_1	48.3037265643139	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTTTATTTCATGT	NA	False	NA	-11	True	ATTAAA	-15	NA	52516735	52499227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52500075_52501153_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ES.10718.1	chr14	-	173	1	Intergenic	novelGene_8987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52519742	52519569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52519600_52519700
ES.10719.1	chr14	-	2006	12	NNC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	8	3967	intron_retention	TRUE	non_canonical	0	0	junction_1	49.8314514510566	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAAGGCATCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	52542573	52528330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52528338_52532311_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.10	chr14	-	4819	4	NIC	ENSMUSG00000022160.19	novel	1091	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_1	3.68178700572909	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542581	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.11	chr14	-	1882	9	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	11	junction_6	54.3103063423509	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542552	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
ES.10719.12	chr14	-	2966	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	126	junction_6	20.5666636652858	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542562	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.13	chr14	-	4010	7	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	150	junction_6	14.0998423947062	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542552	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534230_52534375_52535116_52535325_52537563_52537640_52537859_52542344
ES.10719.14	chr14	-	4095	7	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	34	0	intron_retention	FALSE	canonical	3	140	junction_3	15.8919965880803	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542509	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52537563_52537640_52537859_52542344
ES.10719.15	chr14	-	1671	8	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	-54	0	intron_retention	FALSE	canonical	3	11	junction_7	58.1623343999976	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52537859	52532313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157
ES.10719.16	chr14	-	2484	3	NNC	ENSMUSG00000022160.19	novel	2159	9	NA	NA	723	-1	intron_retention	FALSE	canonical	0	0	junction_2	90	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTCTGAAGTGAAATTA	NA	False	NA	-33	True	AATAAA	-22	NA	52535190	52532314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52533644_52533972_52534058_52534120
ES.10719.17	chr14	-	2902	11	NNC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	67.9423284852676	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTCTGAAGTGAAATTA	NA	False	NA	-33	True	AATAAA	-22	NA	52542585	52532314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535474_52535833_52537306_52537490_52537563_52537640_52537859_52542344
ES.10719.18	chr14	-	1825	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	11	junction_7	51.3181795814656	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTTCTGAAGTGAAATT	NA	False	NA	-34	True	AATAAA	-21	NA	52542579	52532315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
ES.10719.19	chr14	-	3348	2	ISM	ENSMUSG00000022160.19	ENSMUST00000127797.9	963	3	1359	-2129	39	-3	3prime_fragment	FALSE	canonical	3	185	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTTCTGAAGTGAAAT	NA	False	NA	-35	True	AATAAA	-20	NA	52535874	52532316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52535116_52535325
ES.10719.2	chr14	-	3474	1	Genic_Genomic	ENSMUSG00000022160.19	novel	NA	NA	NA	NA	1812	3457	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTCATAGAAAGATAAGG	NA	False	NA	NA	False	NA	NA	NA	52532314	52528840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_52528800_52532300
ES.10719.20	chr14	-	3557	8	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	43	-6	intron_retention	FALSE	canonical	3	126	junction_4	19.688388787842	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGAATTTCTGAAGTGA	NA	False	NA	-38	True	AATAAA	-17	NA	52542500	52532319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52533644_52533972_52534039_52534120_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.21	chr14	-	1952	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	8	-6	intron_retention	FALSE	canonical	2	7	junction_4	50.0017283651893	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGAATTTCTGAAGTGA	NA	False	NA	-38	True	AATAAA	-17	NA	52542573	52532319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.22	chr14	-	2320	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	8	-6	intron_retention	FALSE	canonical	3	126	junction_6	19.5056180574333	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGAATTTCTGAAGTGA	NA	False	NA	-38	True	AATAAA	-17	NA	52542573	52532319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.23	chr14	-	2337	10	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	11	657	7	9	5prime_fragment	FALSE	canonical	3	126	junction_6	20.5666636652858	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATTTGCTCTGATCTT	NA	False	NA	NA	False	ATTAAA	-30	NA	52542574	52532954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.24	chr14	-	1425	1	FSM	ENSMUSG00000022160.19	ENSMUST00000197394.2	1504	1	61	18	23	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAACAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	52542520	52541095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52541100_52542500
ES.10719.3	chr14	-	3453	9	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	140	junction_3	16.0857079421454	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTTTCCACTTAGTG	NA	False	NA	-16	True	AATAAA	-39	NA	52542574	52532297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52537563_52537640_52537859_52542344
ES.10719.4	chr14	-	3117	8	NIC	ENSMUSG00000022160.19	novel	2159	9	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	11	junction_5	56.3205113613149	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGGCTTTCCACTTA	NA	False	NA	-19	True	AATAAA	-36	NA	52542547	52532300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
ES.10719.5	chr14	-	2022	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	0	3	0	-3	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGGCTTTCCACTTA	NA	False	NA	-19	True	AATAAA	-36	NA	52542585	52532300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ES.10719.6	chr14	-	3077	10	NNC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	54.6302950367511	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGGCTTTCCACTTA	NA	False	NA	-19	True	AATAAA	-36	NA	52542561	52532300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535474_52535833_52537563_52537640_52537859_52542344
ES.10719.8	chr14	-	3220	7	NIC	ENSMUSG00000022160.19	novel	2159	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	11	junction_4	60.8187197059151	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAGTGAAATTATGG	NA	False	NA	-30	True	AATAAA	-25	NA	52542579	52532311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
ES.10719.9	chr14	-	5242	5	NIC	ENSMUSG00000022160.19	novel	2159	9	NA	NA	15	2	intron_retention	FALSE	canonical	3	140	junction_2	14.7648230602334	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAAGTGAAATTATGG	NA	False	NA	-30	True	AATAAA	-25	NA	52542528	52532311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52533644_52533972_52534039_52534120_52537563_52537640_52537859_52542344
ES.1072.1	chr1	+	1688	9	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-2005	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.5108429367799	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATAATTCAGTGGCC	NA	False	NA	42	True	TTTAAA	-20	NA	93729681	93746144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93730019_93731195_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.10	chr1	+	6241	6	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_4	87.2756552539137	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	93731696	93749823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740245_93740387_93740482_93744096
ES.1072.12	chr1	+	4434	7	NIC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	78.4870831552697	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	93731697	93749823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93744096_93744233_93744359_93744422_93746002
ES.1072.13	chr1	+	3271	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	11	1251	-7	-1251	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATTCGTGAGTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	93731697	93748566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.14	chr1	+	6109	7	ISM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	11	-6	-7	0	intron_retention	FALSE	canonical	0	0	junction_4	80.6494471979401	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	93731697	93749823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359
ES.1072.16	chr1	+	4504	8	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	97.6856683240606	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAACATTTGAAAGTA	NA	False	NA	NA	False	AATAAA	-10	NA	93731706	93749815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744415_93746002
ES.1072.17	chr1	+	6707	5	NIC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	208	junction_4	6.01560470775798	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGTAGATCATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	93731706	93749825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93731762_93733769_93733842_93739503_93740482_93744096_93744233_93744359
ES.1072.18	chr1	+	3831	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	22	680	4	-680	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGATCTGTGAACATGTTA	NA	False	NA	NA	False	AGTAAA	-12	NA	93731708	93749137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.2	chr1	+	5317	9	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-1952	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.5108429367799	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGTAGATCATTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	93729734	93749826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93730019_93731195_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.3	chr1	+	4722	8	NNC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-408	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.8463907105787	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGAAAGTAGATCATT	NA	False	NA	NA	False	AATAAA	-17	NA	93731278	93749822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93731538_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.7	chr1	+	5155	6	NIC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-14	3	intron_retention	FALSE	canonical	3	185	junction_5	13.4253491574707	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTGAAAGTAGATCA	NA	False	NA	NA	False	AATAAA	-15	NA	93731672	93749820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93731762_93733769_93733842_93739503_93740482_93744096_93744233_93744359_93744422_93746002
ES.1072.9	chr1	+	6569	6	NIC	ENSMUSG00000026283.14	novel	4533	8	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_3	86.4675661736816	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	93731695	93749823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93731762_93733769_93733842_93739503_93740241_93740387_93740482_93744096_93744233_93744359
ES.10720.1	chr14	-	223	1	Intergenic	novelGene_8989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	52548126	52547903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52547900_52548100
ES.10721.1	chr14	-	4761	2	FSM	ENSMUSG00000049532.12	ENSMUST00000135523.5	4773	2	7	5	7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTTCTCCTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	52553773	52548633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_52553121_52553499
ES.10721.2	chr14	-	5028	1	NIC	ENSMUSG00000049532.12	novel	4773	2	NA	NA	111	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTTTTTGTGTGTTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	52553669	52548641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_52548600_52553700
ES.10722.1	chr14	-	177	1	Intergenic	novelGene_8990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTTCTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	52574983	52574806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52574800_52575000
ES.10723.1	chr14	-	244	1	Intergenic	novelGene_8991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAAATATCAAGTAGATA	NA	False	NA	NA	False	NA	NA	NA	52617539	52617295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_52617300_52617500
ES.10724.1	chr14	-	1752	1	FSM	ENSMUSG00000115785.2	ENSMUST00000228343.2	1768	1	0	16	0	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACAAAAAAAAATAATAGT	NA	False	NA	NA	False	AATAAA	-18	NA	53100209	53098457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_53098500_53100200
ES.10725.1	chr14	+	699	2	Fusion	ENSMUSG00000093939.2_ENSMUSG00000096505.3	novel	331	2	NA	NA	-78	290	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCATTTGGGTCATTTT	NA	False	NA	NA	False	TATAAA	-17	NA	53137347	53229136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_53137478_53228567
ES.10726.1	chr14	+	6330	2	Intergenic	novelGene_8992	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGACTAAGACAATAAAG	NA	False	NA	NA	False	NA	NA	NA	53250030	53256771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_53250046_53250456
ES.10727.1	chr14	+	4501	2	FSM	ENSMUSG00000076795.7	ENSMUST00000198439.5	337	2	-69	-4095	-69	4095	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53279815	53284443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_53279937_53280063
ES.10728.1	chr14	+	2026	5	Fusion	ENSMUSG00000094619.3_ENSMUSG00000096329.3	novel	331	2	NA	NA	-103	2729	multi-exon	FALSE	non_canonical	0	0	junction_1	0.866025403784439	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACAATAGATGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	53310116	53319231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_53310265_53313234_53313324_53316193_53316232_53317432_53318084_53318131
ES.10728.2	chr14	+	703	2	Fusion	ENSMUSG00000094619.3_ENSMUSG00000096827.3	novel	456	2	NA	NA	85	329	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTGTCAATAATGTT	NA	False	NA	NA	False	TATAAA	-22	NA	53315993	53404964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_53316056_53404323
ES.10728.3	chr14	+	1129	2	Fusion	ENSMUSG00000094619.3_ENSMUSG00000096827.3	novel	456	2	NA	NA	85	755	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAAAAGGTCCTCTTA	NA	False	NA	NA	False	AATAAA	-31	NA	53315993	53405390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_53316056_53404323
ES.10729.1	chr14	+	3597	4	Fusion	ENSMUSG00000076840.5_ENSMUSG00000076848.4	novel	399	2	NA	NA	-69	3137	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGCGAGTTCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	53791409	53890588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_53791566_53878370_53878507_53887151_53887655_53887786
ES.10729.2	chr14	+	7816	2	Intergenic	novelGene_8994	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGTG	537	False	NA	NA	False	NA	NA	NA	53801361	53809391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_53801582_53801795
ES.10729.3	chr14	+	8028	1	Intergenic	novelGene_8995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGTG	539	False	NA	NA	False	NA	NA	NA	53801363	53809391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_53801400_53809400
ES.10729.4	chr14	+	6071	1	Intergenic	novelGene_8996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCCTTCTATGTCTGCC	542	False	NA	NA	False	NA	NA	NA	53801366	53807437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_53801400_53807400
ES.10729.5	chr14	+	2093	1	Intergenic	novelGene_8997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCTAGCGTCTTATGTA	4684	False	NA	NA	False	NA	NA	NA	53805508	53807601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_53805500_53807600
ES.1073.1	chr1	-	2218	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	-116	3456	-32	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTGTAGACTGTACA	NA	False	NA	-2	True	AATAAA	-37	NA	93682618	93633112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ES.1073.10	chr1	-	4901	2	ISM	ENSMUSG00000026279.15	ENSMUST00000189173.2	2001	3	-198	21828	16	-21828	5prime_fragment	FALSE	canonical	3	388	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGTTGTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	93682570	93674198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93678708_93682178
ES.1073.11	chr1	-	214	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATATGTCTATTTTCCTG	NA	False	NA	NA	False	AAGAAA	-8	NA	93676161	93675947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93675900_93676200
ES.1073.12	chr1	-	2157	2	ISM	ENSMUSG00000026279.15	ENSMUST00000189173.2	2001	3	-198	24572	16	-24572	5prime_fragment	FALSE	canonical	3	388	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGTATTGATATTGTT	NA	False	NA	NA	False	AATACA	-16	NA	93682570	93676942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_93678708_93682178
ES.1073.2	chr1	-	2014	6	NNC	ENSMUSG00000026279.15	novel	2096	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.857987293876	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTGTAGACTGTACA	NA	False	NA	-2	True	AATAAA	-37	NA	93682584	93633112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93652976_93677675_93678708_93682178
ES.1073.3	chr1	-	3265	6	NNC	ENSMUSG00000026279.15	novel	5558	6	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	157.240707197596	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTGTAGACTGTACA	NA	False	NA	-2	True	AATAAA	-37	NA	93682419	93633112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93633378_93642619_93643308_93643691_93644464_93652878_93653039_93677568_93678708_93682178
ES.1073.4	chr1	-	2482	6	NNC	ENSMUSG00000026279.15	novel	5558	6	NA	NA	-590	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	162.636281315087	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGTGTAGACTGTAC	NA	False	NA	-3	True	AATAAA	-36	NA	93683176	93633113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682471
ES.1073.5	chr1	-	2216	7	NIC	ENSMUSG00000026279.15	novel	5558	6	NA	NA	-64	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	186.192030501368	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGTGTAGACTGTAC	NA	False	NA	-3	True	AATAAA	-36	NA	93682436	93633113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93633378_93634955_93635137_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ES.1073.8	chr1	-	2173	6	NNC	ENSMUSG00000026279.15	novel	5558	6	NA	NA	11	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.857987293876	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGATTTTGAATATTAT	NA	False	NA	-20	True	AATAAA	-19	NA	93682575	93633130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677552_93678708_93682178
ES.1073.9	chr1	-	3032	2	NNC	ENSMUSG00000026279.15	novel	600	4	NA	NA	-2054	1101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGAACATGTGCCTTT	9447	False	NA	NA	False	NA	NA	NA	93644758	93641400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93643266_93643591
ES.10730.1	chr14	-	1700	4	Intergenic	novelGene_8993	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGCTCTGTGTCAGCT	NA	False	NA	NA	False	ATTAAA	-18	NA	53961661	53561520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_53562543_53959292_53959489_53960808_53960939_53961309
ES.10731.1	chr14	+	4073	1	Intergenic	novelGene_8998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCATTCAAAAAATAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	54006790	54010863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54006800_54010900
ES.10732.1	chr14	+	498	3	NNC	ENSMUSG00000087666.4	novel	426	2	NA	NA	5	2092	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCCTTAGTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	54032818	54035512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54032964_54033144_54033246_54035260
ES.10733.1	chr14	+	3724	1	Intergenic	novelGene_8999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTAAAAGGTTTGAAT	7999	False	NA	NA	False	AAAAAG	-7	NA	54131140	54134864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54131100_54134900
ES.10734.1	chr14	-	4402	1	Intergenic	novelGene_9000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGGAAAGGAAA	9821	False	NA	NA	False	NA	NA	NA	54171418	54167016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54167000_54171400
ES.10734.2	chr14	-	5718	2	Intergenic	novelGene_9001	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	37	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTCAAGAAAAATGAAGA	7471	False	NA	NA	False	NA	NA	NA	54173768	54167622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54173060_54173487
ES.10734.3	chr14	-	3738	1	Intergenic	novelGene_9002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTACTCTACCCAACT	7506	False	NA	NA	False	NA	NA	NA	54173733	54169995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54170000_54173700
ES.10735.1	chr14	+	137	1	Intergenic	novelGene_9003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAAAC	9	True	NA	NA	False	NA	NA	NA	54467976	54468113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54468000_54468100
ES.10736.1	chr14	+	2243	1	Intergenic	novelGene_9004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGACAGATGGGATG	NA	False	NA	NA	False	NA	NA	NA	54487552	54489795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54487600_54489800
ES.10737.1	chr14	-	854	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	23	1	23	-1	multi-exon	FALSE	canonical	3	1530	junction_1	8	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTTCCTTCATGTTTGT	NA	False	NA	-12	True	ATTAAA	-23	NA	54491538	54472936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54473171_54480155_54480326_54491088
ES.10737.2	chr14	-	7663	2	FSM	ENSMUSG00000022174.9	ENSMUST00000128231.2	3491	2	3	-4175	3	-7	multi-exon	FALSE	canonical	3	1546	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATTCGTTCCTTCAT	NA	False	NA	-18	True	ATTAAA	-17	NA	54491368	54472942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54480326_54491088
ES.10738.1	chr14	+	4628	6	NIC	ENSMUSG00000040997.15	novel	2508	7	NA	NA	-70	-1	intron_retention	FALSE	canonical	3	19	junction_1	142.913400351402	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACTGTTTAATATTGA	NA	False	NA	15	True	AATAAA	-22	NA	54491574	54506625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54502850_54504451_54504639_54505224
ES.10738.10	chr14	+	3111	8	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	162.675588023451	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496693	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500215_54500318_54500481_54500625_54500781_54501918_54502850_54504451_54504639_54505224
ES.10738.11	chr14	+	4342	6	NIC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	14	-2	intron_retention	FALSE	canonical	3	303	junction_1	39.5808034279245	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGACACTGTTTAA	NA	False	NA	9	True	AATAAA	-16	NA	54496702	54506619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54502850_54504451_54504639_54505224
ES.10738.12	chr14	+	4121	9	NNC	ENSMUSG00000040997.15	novel	2406	7	NA	NA	16	227	intron_retention	FALSE	non_canonical	0	0	junction_8	179.557616101351	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAAGCTATATATATTT	NA	False	NA	NA	False	AGTAAA	-3	NA	54496704	54508321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54503458_54503728_54504451_54504639_54505224_54507446_54507678
ES.10738.13	chr14	+	2595	8	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_5	163.559887303379	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496709	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54501918_54502134_54502737_54502850_54504451_54504639_54505224
ES.10738.14	chr14	+	4980	8	NNC	ENSMUSG00000040997.15	novel	2406	7	NA	NA	-19	1361	intron_retention	FALSE	non_canonical	0	0	junction_7	131.104880900439	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACATCCACAGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	54496710	54509455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224_54507446_54507678
ES.10738.16	chr14	+	4470	5	NIC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	303	junction_1	43.0406784333147	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496721	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54496777_54499082_54499172_54500107_54502850_54504451_54504639_54505224
ES.10738.17	chr14	+	6773	4	NIC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	334	junction_2	32.0312347560939	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGATGACACTGTTTA	NA	False	NA	8	True	AATAAA	-15	NA	54496721	54506618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54499172_54500107_54502850_54504451_54504639_54505224
ES.10738.18	chr14	+	2433	8	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_4	164.001244395478	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496725	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502386_54502456_54502737_54502850_54504451_54504639_54505224
ES.10738.19	chr14	+	4714	6	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	154.544491975612	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496738	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54499172_54500107_54500481_54500568_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.2	chr14	+	2639	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	-42	-89	-42	0	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54491602	54506621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.20	chr14	+	3165	7	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	4	-4	intron_retention	FALSE	canonical	1	2	junction_4	136.57079970965	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGATGACACTGTTT	NA	False	NA	7	True	AATAAA	-14	NA	54496739	54506617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54501918_54502850_54504451_54504639_54505224
ES.10738.21	chr14	+	2453	7	NIC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	6	-2	intron_retention	FALSE	canonical	1	3	junction_1	140.486555307696	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGACACTGTTTAA	NA	False	NA	9	True	AATAAA	-16	NA	54496741	54506619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54496884_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.22	chr14	+	3463	7	NIC	ENSMUSG00000040997.15	novel	2406	7	NA	NA	6	-465	intron_retention	FALSE	canonical	1	3	junction_1	140.486555307696	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCACACAGGCACAC	NA	False	NA	NA	False	NA	NA	NA	54496741	54507629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54496884_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.23	chr14	+	4647	6	ISM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	5102	-87	11	-2	3prime_fragment	FALSE	canonical	3	334	junction_4	30.6763752747941	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGACACTGTTTAA	NA	False	NA	9	True	AATAAA	-16	NA	54496746	54506619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.24	chr14	+	1197	6	NNC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	12	-1937	intron_retention	FALSE	canonical	0	0	junction_5	147.977565867262	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAATATGCATTTA	NA	False	NA	NA	False	AATACA	-15	NA	54496747	54503374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54502935
ES.10738.3	chr14	+	3489	1	NIC	ENSMUSG00000040997.15	novel	2508	7	NA	NA	3	-5482	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54491647	54495136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54491600_54495100
ES.10738.5	chr14	+	2730	6	NIC	ENSMUSG00000040997.15	novel	2508	7	NA	NA	10	-2	intron_retention	FALSE	canonical	3	19	junction_1	147.050195511601	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGACACTGTTTAA	NA	False	NA	9	True	AATAAA	-16	NA	54491654	54506619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54491929_54499082_54499172_54500107_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.6	chr14	+	3035	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	10	-537	10	443	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTAGTGGCTAAGAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	54491654	54507069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.7	chr14	+	3435	7	NNC	ENSMUSG00000040997.15	novel	2406	7	NA	NA	-22	-459	intron_retention	FALSE	canonical	0	0	junction_2	135.035077747311	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACAGGCACACATACAT	NA	False	NA	NA	False	NA	NA	NA	54496666	54507635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54496777_54499082_54499170_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.8	chr14	+	2403	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	2	1	2	-1	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACTGTTTAATATTGA	NA	False	NA	15	True	AATAAA	-22	NA	54496690	54506625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10738.9	chr14	+	2841	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	2	-437	2	437	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAGGTTAGTGGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	54496690	54507063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ES.10739.1	chr14	+	138	1	Intergenic	novelGene_9005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATTAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54515252	54515390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54515300_54515400
ES.1074.1	chr1	-	1194	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTAACGCTGCTGAGGG	NA	False	NA	NA	False	NA	NA	NA	93684672	93683478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93683500_93684700
ES.10740.1	chr14	+	179	1	Intergenic	novelGene_9006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	54529197	54529376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54529200_54529400
ES.10741.1	chr14	+	538	3	Intergenic	novelGene_9007	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	54548157	54556563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54548255_54551949_54552075_54556247
ES.10742.1	chr14	+	1551	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-27	1014	-20	22	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATGTTTGTTAAGTAT	NA	False	NA	43	True	AGTAAA	-20	NA	54598270	54606116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.10	chr14	+	1668	9	NIC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	5	-1	intron_retention	FALSE	canonical	3	521	junction_8	25.2537125983488	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCCCTGTCTTGTCTGG	NA	False	NA	20	True	ATTAAA	-43	NA	54598302	54606093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.11	chr14	+	1386	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	9	-27	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	225.107272096255	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCCTTCCATCCACAG	NA	False	NA	-6	True	ATTAAA	-17	NA	54598306	54606067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54598375_54598778_54598926_54600738_54600877_54604165_54604310_54604481_54604568_54604722_54604888_54605048_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.12	chr14	+	2929	9	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	13	junction_3	181.137896366277	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	54598308	54607130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54598926_54600738_54600953_54604165_54604308_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.13	chr14	+	2330	4	NIC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	-1680	-1	intron_retention	FALSE	canonical	3	499	junction_1	36.021598459196	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCCCTGTCTTGTCTGG	NA	False	NA	20	True	ATTAAA	-43	NA	54603407	54606093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54604310_54604481_54605150_54605249_54605691_54605774
ES.10742.14	chr14	+	1219	1	NIC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	594	-230	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACATAACTTTTTTATT	2080	False	NA	3	True	AATAAA	-15	NA	54605681	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54605700_54606900
ES.10742.2	chr14	+	2328	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	-12	222	-5	-222	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTTATTGTTTTGCA	NA	False	NA	11	True	AATAAA	-23	NA	54598285	54606908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.3	chr14	+	1415	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	1123	0	-87	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTTGTTTCCACTAC	NA	False	NA	-10	True	NA	NA	NA	54598297	54606007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.4	chr14	+	1799	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	739	0	297	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACGAAGCAGATATACTG	NA	False	NA	NA	False	NA	NA	NA	54598297	54606391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.5	chr14	+	1985	1	FSM	ENSMUSG00000000959.8	ENSMUST00000228567.2	1059	1	7	-933	0	933	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	54598297	54600282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598300_54600300
ES.10742.7	chr14	+	729	3	FSM	ENSMUSG00000000959.8	ENSMUST00000198107.2	1438	3	1	708	1	-708	multi-exon	FALSE	canonical	3	527	junction_1	34.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTTTACAGTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	54598298	54601244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738
ES.10742.8	chr14	+	2536	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	2	0	2	0	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	54598299	54607130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10742.9	chr14	+	1922	9	NIC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	5	21	intron_retention	FALSE	canonical	3	499	junction_3	30.0333148353624	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATGTTTGTTAAGTA	NA	False	NA	42	True	AGTAAA	-19	NA	54598302	54606115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ES.10743.1	chr14	+	187	1	Intergenic	novelGene_9009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATCACTACTGGG	1260	False	NA	NA	False	NA	NA	NA	54626746	54626933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54626700_54626900
ES.10744.1	chr14	+	4542	2	Antisense	novelGene_ENSMUSG00000000958.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACATCATCATTCCCAC	3477	False	NA	NA	False	NA	NA	NA	54628963	54635158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_54632958_54634610
ES.10744.2	chr14	+	1176	1	Intergenic	novelGene_9010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACATCATCATTCCCAC	8496	False	NA	NA	False	NA	NA	NA	54633982	54635158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54634000_54635200
ES.10745.1	chr14	+	173	1	Intergenic	novelGene_9011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATCATGTACC	NA	False	NA	NA	False	NA	NA	NA	54637268	54637441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54637300_54637400
ES.10746.1	chr14	+	160	1	Intergenic	novelGene_9012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54644445	54644605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54644400_54644600
ES.10747.1	chr14	+	198	1	Intergenic	novelGene_9013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACAAGTGTGTGGTGC	NA	False	NA	NA	False	AAAAAG	-5	NA	54660054	54660252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54660100_54660300
ES.10748.1	chr14	+	2532	1	FSM	ENSMUSG00000010406.13	ENSMUST00000199153.2	856	1	-1653	-23	-1640	23	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGACTGAAGGATGCC	NA	False	NA	NA	False	NA	NA	NA	54662725	54665257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54662700_54665300
ES.10748.2	chr14	+	1356	4	ISM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	-11	6	-11	1	intron_retention	FALSE	canonical	3	1056	junction_1	200.931718639829	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGACTCTCTCTGGCTTT	NA	False	NA	21	True	AATAAA	-22	NA	54664354	54667207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040
ES.10748.3	chr14	+	424	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	-7	1	-7	-1	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTCTGGCTTTCTTTT	NA	False	NA	26	True	AATAAA	-27	NA	54664358	54667212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ES.10748.4	chr14	+	2760	2	ISM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	-23	4	-2	-1	intron_retention	FALSE	canonical	3	1331	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCCAGACTCTCTCTG	NA	False	NA	16	True	AATAAA	-17	NA	54664363	54667202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54664549_54664627
ES.10748.5	chr14	+	492	4	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1056	junction_1	226.233409459248	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGACTCTCTCTGGCTTT	NA	False	NA	21	True	AATAAA	-22	NA	54664364	54667207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54664418_54664490_54664696_54666040_54666106_54667038
ES.10748.6	chr14	+	2830	1	FSM	ENSMUSG00000010406.13	ENSMUST00000199153.2	856	1	4	-1978	3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTCTGGCTTTCTTTT	NA	False	NA	26	True	AATAAA	-27	NA	54664382	54667212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54664400_54667200
ES.10748.7	chr14	+	467	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	-4	0	3	0	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664382	54667206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
ES.10748.8	chr14	+	1810	3	NIC	ENSMUSG00000010406.13	novel	418	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1056	junction_1	234	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCCAGACTCTCTCTG	NA	False	NA	16	True	AATAAA	-17	NA	54664386	54667202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54664418_54664490_54666106_54667038
ES.10749.1	chr14	+	2598	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-6	4	-6	-4	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	54669062	54678718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ES.10749.2	chr14	+	3607	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-6	-1005	-6	1005	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAATCGTTCCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	54669062	54679727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ES.10749.3	chr14	+	3774	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	-4	-1174	-4	1174	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGTGACTCGAGCT	NA	False	NA	5	True	AATAAA	-13	NA	54669064	54679896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ES.10749.4	chr14	+	3458	6	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	5362	-1177	-1618	1177	3prime_fragment	FALSE	canonical	0	0	junction_1	7.02566722810012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGACTCGAGCTGGG	NA	False	NA	8	True	AATAAA	-16	NA	54674430	54679899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ES.1075.1	chr1	-	175	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93695107	93694932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93694900_93695100
ES.10750.1	chr14	-	3462	11	NNC	ENSMUSG00000000958.11	novel	638	6	NA	NA	-145	6582	intron_retention	FALSE	canonical	0	0	junction_1	68.0944197420024	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATCTTTCTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	54655382	54600316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54600966_54601165_54601216_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045
ES.10750.10	chr14	-	3352	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-45	0	intron_retention	FALSE	canonical	3	13	junction_10	52.3909335415525	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655282	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045
ES.10750.11	chr14	-	2340	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	53.460785212673	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655400	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655357
ES.10750.12	chr14	-	3153	4	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	7881	0	intron_retention	FALSE	canonical	3	143	junction_1	10.5303793326209	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	4262	False	NA	-6	True	AATAAA	-15	NA	54613743	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607734_54610396_54610547_54611298_54611396_54611670
ES.10750.13	chr14	-	2289	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-224	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_12	59.9680470472957	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655461	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654116_54655357
ES.10750.14	chr14	-	2298	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	49.5403667112416	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655420	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655357
ES.10750.15	chr14	-	2341	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-360	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_9	44.7447203589429	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655597	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655357
ES.10750.16	chr14	-	2161	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	67.6868091449982	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655271	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607666_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655205
ES.10750.17	chr14	-	2094	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	60.5690644656819	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655400	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654116_54655357
ES.10750.18	chr14	-	2218	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	53.915118473393	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655322	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655205
ES.10750.19	chr14	-	2212	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-169	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	53.1871792169678	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655406	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655357
ES.10750.2	chr14	-	163	1	Intergenic	novelGene_9008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	3395	False	NA	NA	False	NA	NA	NA	54602527	54602364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54602400_54602500
ES.10750.20	chr14	-	2048	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-147	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.4086385732038	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655384	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54645959_54646506_54650184_54650242_54651336_54651471_54654045_54654228_54655357
ES.10750.21	chr14	-	2587	14	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	66.2715410999572	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655155	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650180_54650242_54651024_54651105_54651336_54651471_54654045_54654228_54654944
ES.10750.22	chr14	-	2494	11	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	51.7787601242054	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655337	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54654944
ES.10750.23	chr14	-	2311	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	56.7676138609954	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655281	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655205
ES.10750.24	chr14	-	2317	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.2501788266211	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655382	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651336_54651471_54654045_54654228_54655357
ES.10750.25	chr14	-	2635	13	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	57.8001225488897	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655282	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54654944
ES.10750.26	chr14	-	1575	10	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	55.7257393373238	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655377	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54654045_54654228_54655357
ES.10750.28	chr14	-	3069	9	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-84	0	intron_retention	FALSE	canonical	3	3	junction_7	61.2489795833367	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655321	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54645959_54646506_54654045
ES.10750.29	chr14	-	3432	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-46	0	intron_retention	FALSE	canonical	3	8	junction_10	64.2033985774031	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655283	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650180_54650242_54651024_54651105_54651336_54651471_54654045
ES.10750.3	chr14	-	3245	11	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-66	4	intron_retention	FALSE	canonical	3	22	junction_10	51.423827162124	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTTTATTCTACTT	NA	False	NA	0	True	AATAAA	-21	NA	54655303	54606894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045
ES.10750.30	chr14	-	2314	12	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	59.5727210299235	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655265	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655113
ES.10750.31	chr14	-	3344	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-43	0	intron_retention	FALSE	canonical	0	0	junction_9	57.9840388411378	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655280	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651336_54651471_54654045
ES.10750.32	chr14	-	2086	11	NNC	ENSMUSG00000000958.11	novel	2057	10	NA	NA	-14051	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	64.4919374805875	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54669288	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54667749_54667815_54669185
ES.10750.33	chr14	-	3412	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-88	0	intron_retention	FALSE	canonical	0	0	junction_9	60.6811201866564	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655325	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651024_54651105_54651336_54651471_54654045
ES.10750.34	chr14	-	1669	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.7908530916942	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655420	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607729_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54650184_54650242_54654045_54654228_54655357
ES.10750.35	chr14	-	2402	14	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-169	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.949582309274	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655406	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54650184_54650242_54651336_54651471_54654045_54654228_54655357
ES.10750.36	chr14	-	2144	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-142	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	57.6696204597095	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655379	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654116_54655357
ES.10750.37	chr14	-	3288	11	ISM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	-125	1	-44	0	intron_retention	FALSE	canonical	3	20	junction_9	46.7208732795097	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655281	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045
ES.10750.38	chr14	-	2824	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	65.3611229163705	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655304	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651336_54651471_54654045_54654228_54654771
ES.10750.39	chr14	-	2374	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	907	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	66.1010905104195	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54654229	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54647144_54647221_54649041_54649104_54651336_54651471_54654045
ES.10750.4	chr14	-	2682	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	56.9462556544138	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54655278	54606898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54654833
ES.10750.40	chr14	-	2032	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	55.0135437869621	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655401	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654116_54655357
ES.10750.41	chr14	-	2457	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.2710219786453	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	54655280	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650185_54650242_54651336_54651471_54654045_54654228_54655113
ES.10750.43	chr14	-	4182	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	1673	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.9120891648037	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	757	False	NA	-7	True	AATAAA	-14	NA	54653463	54606901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651024_54651105_54651336
ES.10750.44	chr14	-	2251	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.7848484180988	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	54655281	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54647144_54647221_54654045_54654228_54655205
ES.10750.45	chr14	-	2050	11	NNC	ENSMUSG00000000958.11	novel	2126	11	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.3866118861561	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	54655276	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54655205
ES.10750.46	chr14	-	4465	9	ISM	ENSMUSG00000000958.11	ENSMUST00000195970.5	2057	10	-1380	1	597	-1	intron_retention	FALSE	canonical	3	127	junction_5	17.3349358233597	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	5167	False	NA	-8	True	AATAAA	-13	NA	54649053	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959
ES.10750.47	chr14	-	2879	14	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.6049095632724	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	54655280	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54651024_54651105_54651336_54651471_54654045_54654228_54654771
ES.10750.48	chr14	-	2424	12	FSM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	-148	2	-67	-1	multi-exon	FALSE	canonical	3	16	junction_11	56.5898685556036	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	54655304	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655113
ES.10750.49	chr14	-	2439	15	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-160	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.4792863153772	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCTGAGTGGCTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	54655397	54606902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54646706_54646736_54650184_54650242_54651024_54651105_54651336_54651471_54654045_54654228_54655357
ES.10750.5	chr14	-	3381	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-9076	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	66.6414535655798	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54664313	54606898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54657239_54657531_54663460
ES.10750.50	chr14	-	2681	13	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-95	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	61.5261913515067	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGTCTGAGTGGCTTT	NA	False	NA	-9	True	AATAAA	-12	NA	54655332	54606903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654116_54654833
ES.10750.51	chr14	-	3191	10	ISM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	-185	6	-84	-3	intron_retention	FALSE	canonical	3	45	junction_9	39.09279874325	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAAGGTCTGAGTGGCTT	NA	False	NA	-10	True	AATAAA	-11	NA	54655321	54606904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045
ES.10750.6	chr14	-	2208	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-169	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.5801443272026	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655406	54606899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54650184_54650242_54654045_54654228_54655357
ES.10750.7	chr14	-	2461	13	NIC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	59.075516643248	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655276	54606899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54651336_54651471_54654045_54654228_54655113
ES.10750.8	chr14	-	2289	12	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-93	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	59.7364736236726	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGAGTGGCTTTATTC	NA	False	NA	-5	True	AATAAA	-16	NA	54655330	54606899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54649041_54649104_54654045_54654228_54655205
ES.10750.9	chr14	-	2133	11	NNC	ENSMUSG00000000958.11	novel	2278	12	NA	NA	-221	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.7472336243791	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655458	54606900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54645959_54646506_54650184_54650242_54654045_54654228_54655357
ES.10751.1	chr14	+	172	1	ISM	ENSMUSG00000000957.12	ENSMUST00000225641.2	3238	10	13557	3	6598	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAGGAGGCATCAAAG	1547	False	NA	NA	False	NA	NA	NA	54682646	54682818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54682600_54682800
ES.10752.1	chr14	+	3237	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	-214	1205	-214	549	multi-exon	TRUE	canonical	3	169	junction_1	20.8306664959782	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTGAGCCTGCATCC	NA	False	NA	16	True	AATAAA	-29	NA	54701379	54707749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.10	chr14	+	3141	8	NNC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	54	537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.6628513693462	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701647	54707737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54702069_54702360_54702406_54703030_54703167_54703746_54703931_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.11	chr14	+	4984	5	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	69	537	intron_retention	FALSE	canonical	3	178	junction_2	22.6936114358204	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701662	54707737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702406_54703030_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.2	chr14	+	3025	7	NNC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	10	536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.0909726095037	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTGGTAAATCAGCTG	NA	False	NA	3	True	AATAAA	-16	NA	54701603	54707736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54702069_54702360_54702406_54703005_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.3	chr14	+	3248	6	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	16	536	intron_retention	FALSE	canonical	3	169	junction_1	22.7543402453246	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTGGTAAATCAGCTG	NA	False	NA	3	True	AATAAA	-16	NA	54701609	54707736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706623_54706721
ES.10752.4	chr14	+	2996	7	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	26	536	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	73.7346970940788	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTGGTAAATCAGCTG	NA	False	NA	3	True	AATAAA	-16	NA	54701619	54707736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702069_54702360_54702406_54703030_54703179_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.5	chr14	+	3528	5	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	28	536	intron_retention	FALSE	canonical	3	178	junction_3	22.5111083689809	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTGGTAAATCAGCTG	NA	False	NA	3	True	AATAAA	-16	NA	54701621	54707736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702406_54703030_54703167_54704916_54705108_54705220_54706623_54706721
ES.10752.6	chr14	+	2770	7	NNC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	28	547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.535599249993	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTGTGAGCCTGCAT	NA	False	NA	14	True	AATAAA	-27	NA	54701621	54707747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54701846_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.7	chr14	+	3262	6	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	38	534	intron_retention	FALSE	canonical	3	178	junction_3	20.4899975597851	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCCTTGGTAAATCAGC	NA	False	NA	1	True	AATAAA	-14	NA	54701631	54707734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ES.10752.8	chr14	+	5266	4	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	41	537	intron_retention	FALSE	canonical	3	178	junction_2	25.5081686262787	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701634	54707737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54702406_54703030_54705108_54705220_54706623_54706721
ES.10752.9	chr14	+	2908	7	NNC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	54	549	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	73.3772595714927	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTGAGCCTGCATCC	NA	False	NA	16	True	AATAAA	-29	NA	54701647	54707749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54702069_54702360_54702406_54703030_54703167_54704977_54705108_54705220_54706239_54706492_54706623_54706721
ES.10753.1	chr14	+	1768	5	NNC	ENSMUSG00000022176.12	novel	513	3	NA	NA	-2383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.03108891324554	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTTATCTTGGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	54711173	54717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54711333_54714927_54715273_54715484_54715559_54716410_54716619_54716906
ES.10753.2	chr14	+	1863	5	NNC	ENSMUSG00000022176.12	novel	1884	5	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.91547594742265	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCACTAAGTTTATCT	NA	False	NA	NA	False	AATAAA	-10	NA	54713574	54717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54713832_54714927_54715273_54715484_54715559_54716410_54716623_54716906
ES.10754.1	chr14	+	159	1	Intergenic	novelGene_9014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	54745635	54745794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54745600_54745800
ES.10755.1	chr14	+	168	1	Intergenic	novelGene_9015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54775859	54776027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54775900_54776000
ES.10756.1	chr14	+	159	1	Intergenic	novelGene_9016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	54777304	54777463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54777300_54777500
ES.10757.1	chr14	+	175	1	Intergenic	novelGene_9017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCGAGGAGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	54777767	54777942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54777800_54777900
ES.10758.1	chr14	+	177	1	Intergenic	novelGene_9018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	54785925	54786102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54785900_54786100
ES.10759.1	chr14	+	177	1	Intergenic	novelGene_9019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGAGGCTCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	54796001	54796178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54796000_54796200
ES.1076.1	chr1	-	819	5	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	41	10690	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	1017.54373370386	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTGGGACTTTTAA	2379	False	NA	NA	False	NA	NA	NA	93729587	93709607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93709933_93722447_93722574_93726101_93726193_93728523_93728633_93729419
ES.1076.10	chr1	-	6716	3	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	45	-1	intron_retention	FALSE	canonical	3	1566	junction_1	472.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGCTTTGGTTCTGCCCC	2383	False	NA	-21	True	AATAAA	-23	NA	93729583	93720298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93720666_93722447_93728633_93729419
ES.1076.11	chr1	-	4149	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	-2962	-147	-29	-1	multi-exon	FALSE	canonical	3	1366	junction_2	100	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGCTTTGGTTCTGCCCC	2281	False	NA	-21	True	AATAAA	-23	NA	93729685	93720298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93720666_93722447_93722646_93726101
ES.1076.12	chr1	-	3385	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-54	-3	intron_retention	FALSE	canonical	3	1366	junction_2	499.33845124213	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGAGCTTTGGTTCTGCC	2256	False	NA	-23	True	AATAAA	-21	NA	93729710	93720300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729419
ES.1076.13	chr1	-	1005	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	-5	3	-5	-3	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGAGCTTTGGTTCTGCC	2305	False	NA	-23	True	AATAAA	-21	NA	93729661	93720300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ES.1076.15	chr1	-	3262	4	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-9	-9	intron_retention	FALSE	canonical	3	42	junction_2	1017.16173738496	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2301	False	NA	-29	True	AATAAA	-15	NA	93729665	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722574_93726101_93728633_93729419
ES.1076.16	chr1	-	3016	6	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	55	-9	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	995.811347595517	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2393	False	NA	-29	True	AATAAA	-15	NA	93729573	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93720770_93720850_93722447_93722646_93726101_93726193_93726497_93728633_93729419
ES.1076.18	chr1	-	5077	3	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	-9	intron_retention	FALSE	canonical	3	1366	junction_1	572.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2340	False	NA	-29	True	AATAAA	-15	NA	93729626	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93722646_93726101_93728633_93729419
ES.1076.19	chr1	-	2713	6	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	943.443183238927	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2329	False	NA	-29	True	AATAAA	-15	NA	93729637	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728127_93728414_93728633_93729419
ES.1076.2	chr1	-	3939	1	Antisense	novelGene_ENSMUSG00000026280.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTGGGACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	93713546	93709607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93709600_93713500
ES.1076.20	chr1	-	3321	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	55	-9	intron_retention	FALSE	canonical	3	10	junction_2	1045.54973578496	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2393	False	NA	-29	True	AATAAA	-15	NA	93729573	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93720770_93720850_93722447_93722646_93726101_93728633_93729419
ES.1076.21	chr1	-	3256	4	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	61	-9	intron_retention	FALSE	canonical	1	1	junction_2	1035.07111940302	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2399	False	NA	-29	True	AATAAA	-15	NA	93729567	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722666_93726101_93728633_93729419
ES.1076.22	chr1	-	3173	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	1021.43636610412	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2341	False	NA	-29	True	AATAAA	-15	NA	93729625	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720850_93722447_93722646_93726101_93726193_93726497_93728633_93729419
ES.1076.23	chr1	-	6748	3	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	13	-9	intron_retention	FALSE	canonical	3	131	junction_2	717.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2351	False	NA	-29	True	AATAAA	-15	NA	93729615	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93728633_93729411
ES.1076.24	chr1	-	3319	4	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	14	-9	intron_retention	FALSE	canonical	3	131	junction_3	634.599611303589	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCACGAGCTTTGGT	2324	False	NA	-29	True	AATAAA	-15	NA	93729642	93720306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729411
ES.1076.25	chr1	-	959	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	10	-14	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_4	555.767656039824	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATCTCACGAGCT	2348	False	NA	-34	True	AATAAA	-10	NA	93729618	93720311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729411
ES.1076.26	chr1	-	3030	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_3	674.231599674771	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATCTCACGAGCT	2303	False	NA	-34	True	AATAAA	-10	NA	93729663	93720311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728633_93729411
ES.1076.27	chr1	-	1002	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	18	-14	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	893.748671327684	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATCTCACGAGCT	2356	False	NA	-34	True	AATAAA	-10	NA	93729610	93720311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93728464_93728633_93729419
ES.1076.28	chr1	-	3207	4	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-9	-15	intron_retention	FALSE	canonical	3	18	junction_3	687.459736194702	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2329	False	NA	-35	True	AATAAA	-9	NA	93729637	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729512
ES.1076.29	chr1	-	2470	6	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	43	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	943.443183238927	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2381	False	NA	-35	True	AATAAA	-9	NA	93729585	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93727792_93728264_93728633_93729419
ES.1076.3	chr1	-	2490	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	2	-1489	2	1489	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGCTCACATCTGTCA	2312	False	NA	NA	False	NA	NA	NA	93729654	93718808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ES.1076.30	chr1	-	4121	3	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	48	-15	intron_retention	FALSE	canonical	0	0	junction_1	1255.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2386	False	NA	-35	True	AATAAA	-9	NA	93729580	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93722946_93727305_93728633_93729419
ES.1076.32	chr1	-	2687	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	55	-15	intron_retention	FALSE	canonical	3	1212	junction_2	579.476967234726	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2393	False	NA	-35	True	AATAAA	-9	NA	93729573	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93722646_93726101_93726193_93728523_93728633_93729419
ES.1076.34	chr1	-	865	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	603.535210240463	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2340	False	NA	-35	True	AATAAA	-9	NA	93729626	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729512
ES.1076.35	chr1	-	1050	6	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-34	-15	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	1011.92833738363	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2276	False	NA	-35	True	AATAAA	-9	NA	93729690	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93720770_93720850_93722447_93722646_93726101_93726142_93728523_93728633_93729419
ES.1076.38	chr1	-	902	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	14	-15	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	883.642284807602	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2324	False	NA	-35	True	AATAAA	-9	NA	93729642	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722574_93726101_93726193_93728523_93728633_93729419
ES.1076.39	chr1	-	1004	6	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	35	-15	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	939.98106363905	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2373	False	NA	-35	True	AATAAA	-9	NA	93729593	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93720770_93720850_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ES.1076.4	chr1	-	2463	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	1482	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_4	555.767656039824	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTCCCTTATGCTCACA	2340	False	NA	NA	False	NA	NA	NA	93729626	93718815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729411
ES.1076.40	chr1	-	1647	3	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	31	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1255.5	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATATATCTCACGAGC	2369	False	NA	-35	True	AATAAA	-9	NA	93729597	93720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720958_93727808_93728633_93729419
ES.1076.41	chr1	-	5765	2	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	41	-636	intron_retention	TRUE	non_canonical	0	0	junction_1	0	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	2379	False	NA	NA	False	NA	NA	NA	93729587	93721081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93725408_93728148
ES.1076.42	chr1	-	606	3	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	16	39	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1255.5	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGGTTTGGTTTGG	2354	False	NA	NA	False	NA	NA	NA	93729612	93727747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93727757_93728228_93728633_93729419
ES.1076.43	chr1	-	1037	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	18	0	18	0	multi-exon	FALSE	canonical	3	2511	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGGCTTGTTTTGTTT	2356	False	NA	NA	False	NA	NA	NA	93729610	93727786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93728633_93729419
ES.1076.44	chr1	-	2602	3	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	-2321	-431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1255.5	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTGGTTTTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	93731977	93728217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93728633_93729419_93729817_93730187
ES.1076.45	chr1	-	694	2	NNC	ENSMUSG00000026281.16	novel	1055	2	NA	NA	-34	-431	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTGGTTTTGTT	2276	False	NA	-7	True	ATTAAA	-15	NA	93729690	93728217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93728633_93729411
ES.1076.46	chr1	-	1443	1	Genic_Genomic	ENSMUSG00000026281.16	novel	NA	NA	NA	NA	-5	-432	mono-exon	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTTTTTGGTTTTGT	2305	False	NA	-8	True	ATTAAA	-14	NA	93729661	93728218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_93728200_93729700
ES.1076.47	chr1	-	503	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	2	550	2	-550	multi-exon	FALSE	canonical	3	2511	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCGTCGTATTTGAG	2340	False	NA	-126	True	GATAAA	-21	NA	93729626	93728336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93728633_93729419
ES.1076.5	chr1	-	1780	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	41	-818	13	818	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTCTCGTGAGATCTT	2351	False	NA	-13	True	NA	NA	NA	93729615	93719479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ES.1076.6	chr1	-	4120	4	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	2	816	intron_retention	FALSE	canonical	3	1366	junction_2	499.33845124213	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTCTCTCGTGAGATC	2340	False	NA	-15	True	NA	NA	NA	93729626	93719481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729419
ES.1076.7	chr1	-	3837	5	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	8	816	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	852.002494127805	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTCTCTCGTGAGATC	2318	False	NA	-15	True	NA	NA	NA	93729648	93719481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728633_93729419
ES.1076.8	chr1	-	4138	4	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-8	816	intron_retention	FALSE	canonical	3	131	junction_3	634.599611303589	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTCTCTCGTGAGATC	2330	False	NA	-15	True	NA	NA	NA	93729636	93719481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_93720666_93722447_93722646_93726101_93728633_93729411
ES.1076.9	chr1	-	3063	5	NIC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	852.002494127805	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2276	False	NA	-20	True	AATAAA	-24	NA	93729690	93720297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_93720666_93722447_93722646_93726101_93726193_93726497_93728633_93729419
ES.10760.1	chr14	-	2576	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	122	-7	-10	7	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGCCTGCCTGTT	4817	False	NA	-4	True	AATAAA	-32	NA	54754860	54744636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.10	chr14	-	2610	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	189.02272308839	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4796	False	NA	-21	True	AATAAA	-15	NA	54754881	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752375_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.11	chr14	-	3503	13	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	-10	intron_retention	FALSE	canonical	3	95	junction_12	192.782890982461	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4859	False	NA	-21	True	AATAAA	-15	NA	54754818	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54754703
ES.10760.12	chr14	-	2691	16	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	-10	intron_retention	FALSE	canonical	0	0	junction_11	196.336853392327	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4859	False	NA	-21	True	AATAAA	-15	NA	54754818	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750781_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54754073_54754703
ES.10760.13	chr14	-	2511	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	194.046376141762	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4858	False	NA	-21	True	AATAAA	-15	NA	54754819	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749605_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.14	chr14	-	2560	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	191.984984764434	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4852	False	NA	-21	True	AATAAA	-15	NA	54754825	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753917_54754073_54754703
ES.10760.15	chr14	-	3280	6	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	17	-10	intron_retention	FALSE	canonical	3	694	junction_5	53.8865474863625	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	8781	False	NA	-21	True	AATAAA	-15	NA	54750896	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54749037_54749449_54749612_54750747
ES.10760.16	chr14	-	2596	17	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	2	32	junction_16	184.440327409707	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4859	False	NA	-21	True	AATAAA	-15	NA	54754818	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ES.10760.17	chr14	-	2838	11	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-2	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	242.43986883349	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4857	False	NA	-21	True	AATAAA	-15	NA	54754820	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54748188_54751759_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.2	chr14	-	4600	14	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	685	junction_11	62.5373734411918	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTACCCTGCTTCTT	4854	False	NA	-18	True	AATAAA	-18	NA	54754823	54744650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54746414_54746745_54746863_54747000_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.20	chr14	-	3938	14	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	694	junction_5	48.1074979701371	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4826	False	NA	-21	True	AATAAA	-15	NA	54754851	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54754073_54754703
ES.10760.21	chr14	-	4589	9	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-739	-10	intron_retention	FALSE	canonical	3	685	junction_8	62.0945599469068	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	5823	False	NA	-21	True	AATAAA	-15	NA	54753854	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54748721_54748804_54748864_54748958_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562
ES.10760.22	chr14	-	2457	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	191.093962080831	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGCTTTACCCTGCT	4851	False	NA	-22	True	AATAAA	-14	NA	54754826	54744654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746812_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.23	chr14	-	2675	18	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	252.439804054908	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGCTTTACCCTGCT	4848	False	NA	-22	True	AATAAA	-14	NA	54754829	54744654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746084_54746233_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.24	chr14	-	2929	15	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-13	-11	intron_retention	FALSE	canonical	3	685	junction_13	60.848465176089	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGCTTTACCCTGCT	4846	False	NA	-22	True	AATAAA	-14	NA	54754831	54744654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54754073_54754703
ES.10760.25	chr14	-	2932	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	685	junction_13	60.3178985781906	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGCTTTACCCTGC	4855	False	NA	-23	True	AATAAA	-13	NA	54754822	54744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.26	chr14	-	3585	16	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-8	-12	intron_retention	FALSE	canonical	0	0	junction_4	200.33611756246	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGCTTTACCCTGC	4851	False	NA	-23	True	AATAAA	-13	NA	54754826	54744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54746414_54746745_54746863_54747000_54747095_54747290_54747519_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.27	chr14	-	3880	15	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-8	-12	intron_retention	FALSE	canonical	3	685	junction_12	62.0235307552459	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGCTTTACCCTGC	4851	False	NA	-23	True	AATAAA	-13	NA	54754826	54744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.29	chr14	-	2506	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	193.985018751449	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGCTTTACCCTGC	4859	False	NA	-23	True	AATAAA	-13	NA	54754818	54744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748712_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.3	chr14	-	2406	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	3	95	junction_15	172.951425422156	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTACCCTGCTTCT	4853	False	NA	-19	True	AATAAA	-17	NA	54754824	54744651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54754703
ES.10760.30	chr14	-	4834	13	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-8	-12	intron_retention	FALSE	canonical	3	694	junction_4	60.1130878705572	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGCTTTACCCTGC	4851	False	NA	-23	True	AATAAA	-13	NA	54754826	54744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54752104_54752231_54752345_54752759_54754073_54754703
ES.10760.31	chr14	-	2279	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	150	262	-14	-262	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGAGGACACAAGCCA	4845	False	NA	NA	False	NA	NA	NA	54754832	54744905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.32	chr14	-	2781	1	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	3227	-262	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	531	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGAGGACACAAGCCA	4502	False	NA	NA	False	NA	NA	NA	54747686	54744905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54744900_54747700
ES.10760.33	chr14	-	2245	17	NNC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-14	-287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.093962080831	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACGAAAAAAAAAAAA	4845	False	NA	NA	False	NA	NA	NA	54754832	54744930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54745405_54746348_54746405_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.34	chr14	-	1935	9	NNC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	1218	56798	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	132.943597062815	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	54813797	54748130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54748170_54805211_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.35	chr14	-	1794	1	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	14	565	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAGTGAGCGAGGTCAG	4841	False	NA	NA	False	NA	NA	NA	54754836	54753042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54753000_54754800
ES.10760.36	chr14	-	4610	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	19	-1	intron_retention	FALSE	canonical	3	402	junction_4	35.3568858215765	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791799	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.37	chr14	-	1607	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	-21	1	-21	-1	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791839	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.38	chr14	-	3395	8	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	58	-1	intron_retention	FALSE	canonical	3	8	junction_4	158.266502186299	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791760	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54786322_54786458_54787125_54787258_54787350_54787494_54789593
ES.10760.39	chr14	-	1716	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	401	junction_4	39.3904731502428	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791823	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.4	chr14	-	3765	15	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	685	junction_13	58.2604987473135	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTACCCTGCTTCT	4853	False	NA	-19	True	AATAAA	-17	NA	54754824	54744651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54754073_54754703
ES.10760.40	chr14	-	2692	10	NNC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	142.108722071831	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791398	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54790105
ES.10760.41	chr14	-	2932	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	29	-1	intron_retention	FALSE	canonical	3	401	junction_4	35.5387112878337	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	False	NA	-2	True	AATAAA	-19	NA	54791789	54779242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.44	chr14	-	3079	8	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	3	-5	intron_retention	FALSE	canonical	3	401	junction_3	37.9580864445326	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGAGTTTTAGTCATTT	NA	False	NA	-6	True	AATAAA	-15	NA	54791815	54779246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779909_54781235_54781367_54781661_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.45	chr14	-	1447	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	36	-7	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	152.528224847075	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTAGAGTTTTAGTCAT	NA	False	NA	-8	True	AATAAA	-13	NA	54791782	54779248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.46	chr14	-	1504	10	NNC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	140.721948063075	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTAGAGTTTTAGTCAT	NA	False	NA	-8	True	AATAAA	-13	NA	54791799	54779248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787201_54787350_54787494_54789593_54789668_54791631
ES.10760.47	chr14	-	1463	10	NNC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	96	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	145.090606004032	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTAGAGTTTTAGTCAT	NA	False	NA	-8	True	AATAAA	-13	NA	54791722	54779248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789614_54789668_54791631
ES.10760.48	chr14	-	3713	8	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	60	-7	intron_retention	FALSE	canonical	3	401	junction_5	31.190003631462	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTAGAGTTTTAGTCAT	NA	False	NA	-8	True	AATAAA	-13	NA	54791758	54779248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54789668_54791631
ES.10760.49	chr14	-	1362	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	9	3338	9	638	5prime_fragment	FALSE	canonical	3	401	junction_1	42.1492585937167	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTAGGAGGACTGCTGG	NA	False	NA	NA	False	NA	NA	NA	54791809	54782579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ES.10760.5	chr14	-	4145	13	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	-8	intron_retention	FALSE	canonical	3	685	junction_11	63.4800931176241	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTACCCTGCTTCT	4859	False	NA	-19	True	AATAAA	-17	NA	54754818	54744651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54749037_54749449_54749612_54750747_54752104_54752231_54752345_54752759_54752895_54753562_54754073_54754703
ES.10760.50	chr14	-	3998	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	67	-668	67	668	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTTGAGAATATTTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	54814948	54804260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.51	chr14	-	5952	7	ISM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	839	-656	839	656	intron_retention	FALSE	canonical	3	297	junction_5	59.0604680720437	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCAAAAAGTGGTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	54814176	54804272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848
ES.10760.52	chr14	-	3617	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	-208	-12	-208	12	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGGTTCTTCTTTGCTG	NA	False	NA	6	True	AGTAAA	-30	NA	54815223	54804916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.53	chr14	-	4076	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	24	3	intron_retention	FALSE	canonical	3	297	junction_4	44.6930891998106	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTATTGTGGTTCT	NA	False	NA	-3	True	AGTAAA	-21	NA	54814991	54804925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.55	chr14	-	4512	6	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	6	2	intron_retention	FALSE	canonical	3	297	junction_3	32.994545003682	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGTATTGTGGTTC	NA	False	NA	-4	True	AGTAAA	-20	NA	54815009	54804926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.56	chr14	-	3473	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	5	1	intron_retention	FALSE	canonical	3	297	junction_4	59.2239159649396	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	-5	True	AGTAAA	-19	NA	54815010	54804927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807002_54807701_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.57	chr14	-	3483	9	NNC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.960693113401	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	-5	True	AGTAAA	-19	NA	54814978	54804927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54806514_54806664_54806787_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.59	chr14	-	4467	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	24	1	intron_retention	FALSE	canonical	3	297	junction_4	52.5750785913715	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGTGTATTGTGGTT	NA	False	NA	-5	True	AGTAAA	-19	NA	54814991	54804927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.6	chr14	-	2670	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	-14	-9	intron_retention	FALSE	canonical	3	685	junction_13	60.9588567988461	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTTACCCTGCTTC	4845	False	NA	-20	True	AATAAA	-16	NA	54754832	54744652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54745405_54746348_54746414_54746745_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ES.10760.60	chr14	-	3328	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	147.662245983491	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	False	NA	-6	True	AGTAAA	-18	NA	54815048	54804928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54813688
ES.10760.62	chr14	-	4992	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	297	junction_5	58.5787693812547	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGAGTGTATTGTGG	NA	False	NA	-7	True	AGTAAA	-17	NA	54815053	54804929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54810951_54813688
ES.10760.63	chr14	-	3843	8	NNC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	140.749451733445	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGAGTGTATTGTGG	NA	False	NA	-7	True	AGTAAA	-17	NA	54815068	54804929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809685_54810848_54810951_54813688
ES.10760.65	chr14	-	3389	7	NNC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.356052658098	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTGAGTGTATTGT	NA	False	NA	-9	True	AGTAAA	-15	NA	54815039	54804931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54806514_54806932_54807002_54807701_54807754_54809057_54809121_54809222_54809393_54810848_54810951_54813688
ES.10760.66	chr14	-	2734	9	NNC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.943597062815	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTTTGTGAGTGTATT	NA	False	NA	-11	True	AGTAAA	-13	NA	54814991	54804933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54805804_54806437_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.67	chr14	-	7287	5	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	297	junction_3	29.508473359359	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTTTGTGAGTGTATT	NA	False	NA	-11	True	AGTAAA	-13	NA	54815053	54804933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848
ES.10760.68	chr14	-	3257	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	152.223154903874	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTTTGTGAGTGTATT	NA	False	NA	-11	True	AGTAAA	-13	NA	54815011	54804933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54806514_54806932_54807002_54807701_54807754_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.69	chr14	-	3117	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	5	275	5	-272	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTGTCCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	54815010	54805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10760.7	chr14	-	3461	15	ISM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	156	10	-8	-10	intron_retention	FALSE	canonical	3	685	junction_14	57.1482586732768	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTTACCCTGCTT	4851	False	NA	-21	True	AATAAA	-15	NA	54754826	54744653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562
ES.10760.70	chr14	-	2198	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	25	1174	25	-1171	multi-exon	FALSE	canonical	3	297	junction_5	54.835933399886	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTATATACGTCAC	NA	False	NA	NA	False	NA	NA	NA	54814990	54806102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ES.10761.1	chr14	+	3698	1	Antisense	novelGene_ENSMUSG00000022179.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACTAAACAAAAAACT	7878	False	NA	NA	False	NA	NA	NA	54822028	54825726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_54822000_54825700
ES.10762.1	chr14	-	2639	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	32	-1	32	1	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTTGGGCTTAGTG	NA	False	NA	0	True	NA	NA	NA	54843418	54821118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
ES.10762.2	chr14	-	203	1	Intergenic	novelGene_9020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGACATGGGTTAGAT	NA	False	NA	NA	False	NA	NA	NA	54824568	54824365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54824400_54824600
ES.10763.1	chr14	+	182	1	Intergenic	novelGene_9021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTTTTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	54846171	54846353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_54846200_54846400
ES.10764.1	chr14	-	3727	5	NNC	ENSMUSG00000022193.8	novel	899	3	NA	NA	-4	4495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	929.255447925919	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGCATCACCAATGTTTT	8634	False	NA	NA	False	AATAAA	-13	NA	54855469	54847080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54849635_54850935_54851189_54851544_54851939_54853971_54854279_54855250
ES.10764.2	chr14	-	917	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	-12	-6	-12	6	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCACAGTTATTTCAGTG	8612	False	NA	-11	True	AATAAA	-24	NA	54855491	54851569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54851939_54853971_54854279_54855250
ES.10764.3	chr14	-	884	3	NNC	ENSMUSG00000022193.8	novel	899	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	927	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGTCCACAGTTAT	8629	False	NA	-18	True	AATAAA	-17	NA	54855474	54851576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54851939_54853980_54854279_54855250
ES.10764.4	chr14	-	627	3	FSM	ENSMUSG00000022193.8	ENSMUST00000227257.2	622	3	-4	-1	-4	1	multi-exon	FALSE	canonical	2	118	junction_1	868	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGTCCACAGTTAT	8634	False	NA	-18	True	AATAAA	-17	NA	54855469	54851576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54851939_54854232_54854279_54855250
ES.10764.5	chr14	-	908	3	NNC	ENSMUSG00000022193.8	novel	899	3	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	927	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGTGGAGTCCACAGTT	8630	False	NA	-20	True	AATAAA	-15	NA	54855473	54851578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54851957_54853971_54854279_54855250
ES.10764.6	chr14	-	1408	3	NNC	ENSMUSG00000022193.8	novel	899	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	927	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGTGGAGTCCACAGTT	8634	False	NA	-20	True	AATAAA	-15	NA	54855469	54851578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54852064_54853574_54854279_54855250
ES.10765.2	chr14	-	3363	13	NNC	ENSMUSG00000059674.8	novel	3489	12	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.9537935951883	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGAGCCCGCTTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	54878788	54868690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54868991_54869080_54870070_54870503_54870753_54870915_54871028_54871106_54871229_54873789_54873927_54874777_54875032_54875460_54875649_54875783_54875952_54876024_54876145_54876327_54876623_54876800_54877119_54878677
ES.10765.4	chr14	-	2140	5	NIC	ENSMUSG00000059674.8	novel	3489	12	NA	NA	9	-3077	intron_retention	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAATATAATGTAT	NA	False	NA	NA	False	NA	NA	NA	54878812	54873086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54873927_54874777_54875032_54876024_54876145_54876327_54877119_54878677
ES.10766.1	chr14	+	3006	5	NNC	ENSMUSG00000040840.8	novel	968	6	NA	NA	358	12883	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTAAAAAAAACA	4743	False	NA	NA	False	NA	NA	NA	54888325	54904947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54889316_54899624_54899743_54901045_54901263_54901828_54903091_54904528
ES.10766.2	chr14	+	1105	2	NNC	ENSMUSG00000040840.8	novel	968	6	NA	NA	3226	491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTTGTATTTTTG	7611	False	NA	NA	False	NA	NA	NA	54891193	54892555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54891404_54891660
ES.10767.1	chr14	+	6031	2	Antisense	novelGene_ENSMUSG00000022185.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCAACTGTCTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	54916203	54922316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_54917639_54917720
ES.10768.1	chr14	+	1875	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	-35	3	-35	-3	multi-exon	FALSE	canonical	3	385	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTACTGGTGATTCA	NA	False	NA	NA	False	AATAAA	-23	NA	54923637	54928195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54924578_54927260
ES.10768.2	chr14	+	4640	1	Genic_Genomic	ENSMUSG00000040822.8	novel	NA	NA	NA	NA	-35	79	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCCTCGGCGTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	54923637	54928277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_54923600_54928300
ES.10768.3	chr14	+	1486	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-54	-621	-33	-7	multi-exon	FALSE	canonical	3	26	junction_1	179.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATAATTACTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	54923639	54928191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54924111_54924493_54924578_54927260
ES.10768.4	chr14	+	1384	2	NIC	ENSMUSG00000040822.8	novel	811	3	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATAATTACTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	54923657	54928191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_54924111_54927260
ES.10768.5	chr14	+	1943	3	FSM	ENSMUSG00000040822.8	ENSMUST00000227269.2	893	3	-843	-207	-15	-7	multi-exon	FALSE	canonical	0	0	junction_1	2	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATAATTACTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	54923657	54928191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_54924578_54926642_54926735_54927260
ES.10768.6	chr14	+	4132	2	ISM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-21	-617	0	-11	intron_retention	FALSE	canonical	3	26	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAGAAATAATTACTG	NA	False	NA	NA	False	AATAAA	-15	NA	54923672	54928187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_54924111_54924493
ES.10768.7	chr14	+	1833	3	NNC	ENSMUSG00000040822.8	novel	893	3	NA	NA	11	-7	intron_retention	FALSE	canonical	0	0	junction_1	2	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATAATTACTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	54923704	54928191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_54924578_54926705_54926735_54927260
ES.10769.1	chr14	-	2439	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	-70	0	-1	0	multi-exon	FALSE	canonical	3	94	junction_11	105.5899600787	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3753	False	NA	0	True	AATAAA	-25	NA	54891143	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
ES.10769.11	chr14	-	2303	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-1	0	intron_retention	FALSE	canonical	2	44	junction_11	118.32012885626	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3743	False	NA	-1	True	AATAAA	-24	NA	54891153	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
ES.10769.14	chr14	-	4799	19	FSM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	-65	1	-65	0	multi-exon	FALSE	canonical	3	51	junction_16	154.301732625911	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2565	False	NA	-1	True	AATAAA	-24	NA	54924453	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ES.10769.18	chr14	-	4564	17	NIC	ENSMUSG00000022185.20	novel	4048	18	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_16	161.204729594854	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2614	False	NA	-1	True	AATAAA	-24	NA	54924404	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54923925
ES.10769.19	chr14	-	4631	18	NIC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	-53	0	intron_retention	FALSE	canonical	3	59	junction_15	155.382305619572	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2577	False	NA	-1	True	AATAAA	-24	NA	54924441	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.21	chr14	-	2453	13	NNC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_12	158.407088084958	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3760	False	NA	-1	True	AATAAA	-24	NA	54891136	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890998
ES.10769.22	chr14	-	2362	13	NNC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	165.012352231246	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3744	False	NA	-1	True	AATAAA	-24	NA	54891152	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880497_54881176_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ES.10769.23	chr14	-	8390	5	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-1177	0	intron_retention	FALSE	canonical	3	336	junction_4	46.2189084682882	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	5994	False	NA	-1	True	AATAAA	-24	NA	54888902	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54882013_54882140_54882249_54882667_54882814_54883061_54884061_54884159
ES.10769.25	chr14	-	2501	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_12	154.077429127912	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3758	False	NA	-1	True	AATAAA	-24	NA	54891138	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
ES.10769.28	chr14	-	2769	12	FSM	ENSMUSG00000022185.20	ENSMUST00000167015.8	1746	12	-457	-566	-1	0	multi-exon	FALSE	canonical	3	134	junction_11	95.7414735214897	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3743	False	NA	-1	True	AATAAA	-24	NA	54891153	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670
ES.10769.29	chr14	-	2497	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	2	-5	1	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
ES.10769.3	chr14	-	4623	12	NIC	ENSMUSG00000022185.20	novel	2381	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	11	junction_10	165.810107458916	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3751	False	NA	0	True	AATAAA	-25	NA	54891145	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54886988_54889316_54890991
ES.10769.30	chr14	-	2404	12	NIC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	-3	0	intron_retention	FALSE	canonical	3	94	junction_11	134.131858154209	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3751	False	NA	-1	True	AATAAA	-24	NA	54891145	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890991
ES.10769.31	chr14	-	6566	18	NIC	ENSMUSG00000022185.20	novel	4048	18	NA	NA	-65	0	intron_retention	FALSE	canonical	3	11	junction_10	159.34613365695	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2863	False	NA	-1	True	AATAAA	-24	NA	54924155	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54886988_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.32	chr14	-	3569	10	ISM	ENSMUSG00000022185.20	ENSMUST00000147714.8	4383	19	37025	0	316	0	3prime_fragment	FALSE	canonical	3	97	junction_8	114.141238044023	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	7848	False	NA	-1	True	AATAAA	-24	NA	54887048	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544
ES.10769.33	chr14	-	3866	14	NNC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	188.564618591653	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3759	False	NA	-1	True	AATAAA	-24	NA	54891137	54879618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54886978_54888345_54889173_54889316_54890670_54890775_54890991
ES.10769.34	chr14	-	3881	14	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_11	177.18632589125	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTGCCTTTCCTTG	3760	False	NA	-2	True	AATAAA	-23	NA	54891136	54879619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54886988_54888375_54889173_54889316_54890670_54890736_54890991
ES.10769.35	chr14	-	2536	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	25	junction_12	135.990706381805	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTGCCTTTCCTTG	3758	False	NA	-2	True	AATAAA	-23	NA	54891138	54879619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
ES.10769.37	chr14	-	2461	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	46	junction_12	150.58939759049	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTGCCTTTCCTTG	3758	False	NA	-2	True	AATAAA	-23	NA	54891138	54879619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
ES.10769.38	chr14	-	4410	19	NNC	ENSMUSG00000022185.20	novel	4735	19	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	163.65177762856	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2943	False	NA	-3	True	AATAAA	-22	NA	54924075	54879620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901250_54901824_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ES.10769.4	chr14	-	4765	19	FSM	ENSMUSG00000022185.20	ENSMUST00000147714.8	4383	19	-381	-1	-66	0	multi-exon	FALSE	canonical	3	51	junction_16	159.32330861072	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	2564	False	NA	0	True	AATAAA	-25	NA	54924454	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ES.10769.41	chr14	-	4525	17	NIC	ENSMUSG00000022185.20	novel	4048	18	NA	NA	-66	-2	intron_retention	FALSE	canonical	0	0	junction_7	162.128421320878	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2564	False	NA	-3	True	AATAAA	-22	NA	54924454	54879620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.42	chr14	-	4206	17	NIC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_16	173.147144341886	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGAGTGCCTTTCCTT	2931	False	NA	-3	True	AATAAA	-22	NA	54924087	54879620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884291_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54923925
ES.10769.43	chr14	-	2329	13	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-1	2	intron_retention	FALSE	canonical	1	2	junction_12	158.053964061505	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3743	False	NA	-4	True	AATAAA	-21	NA	54891153	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ES.10769.44	chr14	-	4132	13	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	2	2	intron_retention	FALSE	canonical	2	4	junction_11	178.793390227069	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3760	False	NA	-4	True	AATAAA	-21	NA	54891136	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54886988_54888375_54889173_54889316_54890670
ES.10769.45	chr14	-	3791	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	-1	2	intron_retention	FALSE	canonical	1	1	junction_11	172.259554645502	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3753	False	NA	-4	True	AATAAA	-21	NA	54891143	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54886988_54888345_54889173_54889316_54890991
ES.10769.49	chr14	-	2264	12	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	-1	2	intron_retention	FALSE	canonical	2	44	junction_11	143.681063240374	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3743	False	NA	-4	True	AATAAA	-21	NA	54891153	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54891136
ES.10769.51	chr14	-	7689	10	ISM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	4	-2	3	2	intron_retention	FALSE	canonical	3	314	junction_9	57.3173965792	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3761	False	NA	-4	True	AATAAA	-21	NA	54891135	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544
ES.10769.52	chr14	-	3324	12	NNC	ENSMUSG00000022185.20	novel	1746	12	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_11	129.806913185484	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGAGTGCCTTTCCT	3759	False	NA	-4	True	AATAAA	-21	NA	54891137	54879621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890096
ES.10769.54	chr14	-	5493	6	NIC	ENSMUSG00000022185.20	novel	2369	12	NA	NA	-173	1	intron_retention	FALSE	canonical	3	362	junction_1	32.8243811822858	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTGAGTGCCTTTCC	8688	False	NA	-5	True	AATAAA	-20	NA	54886208	54879622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061
ES.10769.55	chr14	-	3824	13	NNC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_10	173.462031548373	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTGAGTGCCTTTCC	3759	False	NA	-5	True	AATAAA	-20	NA	54891137	54879622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54886978_54888375_54889173_54889316_54890991
ES.10769.56	chr14	-	4904	12	NIC	ENSMUSG00000022185.20	novel	1746	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	11	junction_10	161.337795626197	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTGAGTGCCTTTCC	3753	False	NA	-5	True	AATAAA	-20	NA	54891143	54879622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54886988_54889316_54890670
ES.10769.58	chr14	-	4640	18	NNC	ENSMUSG00000022185.20	novel	4048	18	NA	NA	-54	1	intron_retention	FALSE	non_canonical	0	0	junction_8	168.409473798394	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTTGAGTGCCTTTCC	2576	False	NA	-5	True	AATAAA	-20	NA	54924442	54879622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884063_54884182_54884291_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.6	chr14	-	4110	11	ISM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	1	-6	0	0	intron_retention	FALSE	canonical	3	314	junction_9	54.4140606828786	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3758	False	NA	0	True	AATAAA	-25	NA	54891138	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173
ES.10769.64	chr14	-	3841	14	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	1	-1	intron_retention	FALSE	canonical	2	4	junction_11	184.842712602815	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATTTGAGTGCCTTT	3759	False	NA	-7	True	AATAAA	-18	NA	54891137	54879624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54886988_54888375_54889173_54889316_54890670_54890736_54890991
ES.10769.67	chr14	-	2997	15	NNC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	-957	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	161.977149434034	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGCATTTGAGTGCCTT	10017	False	NA	-8	True	AATAAA	-17	NA	54903091	54879625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54902045_54902888
ES.10769.69	chr14	-	2359	13	FSM	ENSMUSG00000022185.20	ENSMUST00000148754.10	2373	13	6	8	0	-3	multi-exon	FALSE	canonical	1	2	junction_12	140.751628172939	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCATTTGAGTGCCT	3744	False	NA	-9	True	AATAAA	-16	NA	54891152	54879626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ES.10769.7	chr14	-	4684	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	-69	-567	-69	0	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	2561	False	NA	0	True	AATAAA	-25	NA	54924457	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.74	chr14	-	1675	11	NIC	ENSMUSG00000022185.20	novel	2373	13	NA	NA	0	-176	intron_retention	FALSE	canonical	2	44	junction_10	118.638990218225	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGAATCTTGCGTGTGG	3744	False	NA	NA	False	TATAAA	-35	NA	54891152	54880920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54891136
ES.10769.75	chr14	-	4110	18	NIC	ENSMUSG00000022185.20	novel	4735	19	NA	NA	-8	-178	intron_retention	FALSE	canonical	3	51	junction_15	154.850234600111	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGAATCTTGCGTGT	2622	False	NA	NA	False	TATAAA	-33	NA	54924396	54880922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ES.10769.76	chr14	-	1617	11	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	0	-195	intron_retention	FALSE	canonical	2	44	junction_10	162.229128087406	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTACGTTGGCATTTCT	3744	False	NA	NA	False	TATAAA	-16	NA	54891152	54880939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884291_54885544_54885588_54889173_54889316_54891136
ES.10769.77	chr14	-	158	1	Intergenic	novelGene_9022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	8685	False	NA	NA	False	NA	NA	NA	54898902	54898744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54898700_54898900
ES.10769.78	chr14	-	3034	6	ISM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	292	19745	-6	-665	5prime_fragment	FALSE	canonical	3	59	junction_3	31.052214091752	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACTAATTTATATAGGA	2922	False	NA	NA	False	NA	NA	NA	54924096	54899929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ES.10769.8	chr14	-	3687	13	NIC	ENSMUSG00000022185.20	novel	2365	13	NA	NA	-1	0	intron_retention	FALSE	canonical	2	4	junction_11	187.462199893442	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3743	False	NA	0	True	AATAAA	-25	NA	54891153	54879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54886988_54888375_54889173_54889316_54891136
ES.1077.1	chr1	+	3172	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	0	-309	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	14.4640892054498	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCTTGTTCTTAAAG	NA	False	NA	NA	False	NA	NA	NA	93752961	93779761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753303_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.10	chr1	+	2751	9	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	7	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.5080624192708	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTACCTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	93752968	93779757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93766542_93766686_93775824_93775991_93778288
ES.1077.11	chr1	+	3212	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9625045767704	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCTCCACACATTTAG	NA	False	NA	NA	False	CATAAA	-26	NA	93752968	93780069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754018_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.12	chr1	+	3442	10	NIC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	7	-14	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16.0516142798055	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGCTCATTACATCTC	NA	False	NA	NA	False	CATAAA	-13	NA	93752968	93780056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93753042_93754006_93754594_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.13	chr1	+	5598	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	7	-96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.0516142798055	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGCTATCAGTTTCTG	NA	False	NA	NA	False	AATACA	-16	NA	93752968	93779974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754006_93756832_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.14	chr1	+	4814	9	Fusion	ENSMUSG00000101660.2_ENSMUSG00000073609.10	novel	3459	10	NA	NA	8	357	intron_retention	FALSE	canonical	0	0	junction_6	18.4691465693464	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGCGAGGCTGCCACCAG	NA	False	NA	NA	False	NA	NA	NA	93752969	93844847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_93753303_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93763178_93765661_93765806_93838938_93839082_93841769_93841936_93844233
ES.1077.17	chr1	+	2989	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	14	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9625045767704	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACCTTGTTCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	93752975	93779762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753303_93754188_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.18	chr1	+	2902	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	15	315	15	-315	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCAGCTTACCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	93752976	93779755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.19	chr1	+	2714	9	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	-8	-309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.1894339416253	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCTTGTTCTTAAAG	NA	False	NA	NA	False	NA	NA	NA	93752987	93779761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754006_93754363_93756916_93756986_93757478_93757619_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.2	chr1	+	1548	9	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	2	-3963	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	14.2121207073399	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAGAAAGCTTAACTT	NA	False	NA	NA	False	NA	NA	NA	93752963	93776107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824
ES.1077.20	chr1	+	2981	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	27	-173	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACTATTCTCTATCAC	NA	False	NA	NA	False	AATAGA	-23	NA	93753022	93779897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.21	chr1	+	4474	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	278	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.3525534464272	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTATTCTCTATCACT	NA	False	NA	NA	False	AATAGA	-24	NA	93753273	93779898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753303_93754006_93754363_93755462_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.22	chr1	+	2010	5	Fusion	ENSMUSG00000101660.2_ENSMUSG00000073609.10	novel	3232	10	NA	NA	5575	1216	multi-exon	FALSE	canonical	0	0	junction_2	21.2647007973308	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCTTGTTCTTAAAG	7910	False	NA	NA	False	NA	NA	NA	93763093	93845706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_93763178_93765661_93765806_93838938_93839082_93841769_93841936_93844233
ES.1077.23	chr1	+	206	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGGAAGGACCGAG	NA	False	NA	NA	False	NA	NA	NA	93791972	93792178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93792000_93792200
ES.1077.24	chr1	+	2406	3	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGCATTATTGTTTTT	6596	False	NA	NA	False	AATAAA	-13	NA	93818423	93828955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93818536_93826550_93826737_93826847
ES.1077.25	chr1	+	3198	1	Genic_Genomic	ENSMUSG00000101660.2_ENSMUSG00000093805.8	novel	NA	NA	NA	NA	-1698	3042	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTTTTCCTCAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	93844334	93847532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_93844300_93847500
ES.1077.26	chr1	+	1611	1	Genic_Genomic	ENSMUSG00000101660.2	novel	NA	NA	NA	NA	10422	1508	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTGGCTCATTACAT	NA	False	NA	NA	False	CATAAA	-10	NA	93844387	93845998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_93844400_93846000
ES.1077.3	chr1	+	2468	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	2	-1006	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.0365109321456	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTAAAACTAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	93752963	93779064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753303_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.4	chr1	+	3509	10	FSM	ENSMUSG00000073609.10	ENSMUST00000112881.8	3459	10	-32	-18	2	18	multi-exon	FALSE	canonical	2	4	junction_1	13.9761701954911	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTCTGAATTCCCAAT	NA	False	NA	NA	False	CATAAA	-45	NA	93752963	93780088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93753303_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.5	chr1	+	3219	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	2	11	2	-11	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATTACATCTCTCC	NA	False	NA	NA	False	CATAAA	-16	NA	93752963	93780059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.6	chr1	+	3446	9	NIC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	2	410	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	16.5151445649137	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCAGCGTGTAGCTGTAA	NA	False	NA	NA	False	AATAGA	-12	NA	93752963	93780480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.7	chr1	+	2753	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	5	65632	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	16.8266396665863	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTACCTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	93752966	93845702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93766542_93766686_93775824_93775991_93778288_93779542_93845486
ES.1077.8	chr1	+	2905	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	5	-305	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTTCTTAAAGACCT	NA	False	NA	NA	False	NA	NA	NA	93752966	93779765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.1077.9	chr1	+	2370	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	7	855	7	-855	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTCCAAAGCCTGGTC	NA	False	NA	NA	False	NA	NA	NA	93752968	93779215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ES.10770.1	chr14	-	2360	14	NNC	ENSMUSG00000114865.3	novel	2342	14	NA	NA	132	1551	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.737820234355803	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATTTTAAACCCTGTT	8632	False	NA	NA	False	NA	NA	NA	54936125	54928503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54928713_54929983_54930426_54931151_54931332_54931468_54931699_54932154_54932419_54932506_54932604_54932684_54932755_54933073_54933246_54933334_54933481_54933611_54933697_54933875_54934002_54934299_54934444_54934863_54934916_54935982
ES.10770.2	chr14	-	3343	8	NNC	ENSMUSG00000114865.3	novel	2342	14	NA	NA	149	-164	intron_retention	FALSE	canonical	0	0	junction_1	0.880630571852711	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTGCCGGATGCCAGA	8649	False	NA	NA	False	AATAAA	-13	NA	54936108	54930218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54930426_54931151_54931699_54932154_54932419_54932506_54932604_54933073_54933246_54933334_54934002_54934299_54934444_54934863
ES.10771.1	chr14	-	126	1	Intergenic	novelGene_9023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAAAATAAAACAAA	9613	False	NA	NA	False	NA	NA	NA	54937586	54937460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_54937500_54937600
ES.10772.1	chr14	-	4093	11	FSM	ENSMUSG00000022180.8	ENSMUST00000022787.8	4084	11	-16	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_10	10.5375518978556	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAGTGATGGAGTTAA	NA	False	NA	NA	False	AATAAA	-12	NA	55019403	54959672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ES.10772.2	chr14	-	3197	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27026	-7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGAGTGATGGAGTTAA	2188	False	NA	NA	False	AATAAA	-12	NA	54992361	54959672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
ES.10772.3	chr14	-	3184	10	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27206	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	10.5069054306392	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAGTGATGGAGTTA	2368	False	NA	NA	False	AATAAA	-11	NA	54992181	54959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54986289_54986458_54992133
ES.10772.4	chr14	-	4670	2	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	39248	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAGTGATGGAGTTA	9232	False	NA	NA	False	AATAAA	-11	NA	54980139	54959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_54961475_54977270
ES.10772.5	chr14	-	153	1	Intergenic	novelGene_9024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAGTATATAATAC	NA	False	NA	NA	False	AAAAAG	-3	NA	55016173	55016020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55016000_55016200
ES.10773.1	chr14	+	1341	16	NNC	ENSMUSG00000112858.3	novel	1233	16	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	7.46964226422896	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTGTATGAGGGTAT	NA	False	NA	14	True	ATTAAA	-18	NA	55051598	55091565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55060459_55060585_55075566_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
ES.10773.2	chr14	+	1129	14	FSM	ENSMUSG00000112858.3	ENSMUST00000220122.2	1095	14	-41	7	3	4	multi-exon	FALSE	canonical	1	1	junction_2	6.68478799458475	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTTAAAAACTG	NA	False	NA	-6	True	NA	NA	NA	55051609	55091545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55051743_55053942_55054044_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
ES.10773.4	chr14	+	1186	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	30	-15	21	2	multi-exon	FALSE	canonical	3	13	junction_1	4.37525509460387	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTATGAGGGTATAC	NA	False	NA	16	True	ATTAAA	-20	NA	55051627	55091567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
ES.10773.5	chr14	+	4224	1	Antisense	novelGene_ENSMUSG00000086420.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGGCTGTTATTTCTC	6512	False	NA	NA	False	NA	NA	NA	55062374	55066598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_55062400_55066600
ES.10773.6	chr14	+	176	1	Intergenic	novelGene_9026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6118	False	NA	NA	False	NA	NA	NA	55069057	55069233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55069100_55069200
ES.10774.1	chr14	+	183	2	Antisense	novelGene_ENSMUSG00000057156.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3603	False	NA	NA	False	NA	NA	NA	55098677	55109258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_55098827_55109224
ES.10774.2	chr14	+	179	1	Intergenic	novelGene_9028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACACTTGTGA	3604	False	NA	NA	False	NA	NA	NA	55098678	55098857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55098700_55098900
ES.10774.3	chr14	+	142	1	Intergenic	novelGene_9029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAGA	7169	False	NA	NA	False	NA	NA	NA	55102243	55102385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55102200_55102400
ES.10775.1	chr14	-	231	1	Intergenic	novelGene_9025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTTTCAACAA	6494	False	NA	NA	False	NA	NA	NA	55057539	55057308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55057300_55057500
ES.10776.1	chr14	-	285	1	Intergenic	novelGene_9027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGGCAGGTGTTGAG	9241	False	NA	NA	False	AATAAA	-26	NA	55083150	55082865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55082900_55083200
ES.10777.1	chr14	-	5721	2	FSM	ENSMUSG00000057156.11	ENSMUST00000142283.4	4713	2	43	-1051	43	0	multi-exon	FALSE	canonical	3	19	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTCATGTTTACAGTT	5571	False	NA	NA	False	AGTAAA	-23	NA	55101572	55090192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55095739_55101397
ES.10777.2	chr14	-	1849	3	NIC	ENSMUSG00000057156.11	novel	4713	2	NA	NA	50	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCACTTCTGTGTTT	5578	False	NA	-5	True	AATAAA	-34	NA	55101565	55093008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55093169_55094217_55095739_55101397
ES.10777.3	chr14	-	2935	2	FSM	ENSMUSG00000057156.11	ENSMUST00000142283.4	4713	2	12	1766	12	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGCCACTTCTGTGTT	5540	False	NA	-6	True	AATAAA	-33	NA	55101603	55093009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55095739_55101397
ES.10778.1	chr14	+	135	1	Intergenic	novelGene_9030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	55112567	55112702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55112600_55112700
ES.10779.1	chr14	-	989	2	FSM	ENSMUSG00000072494.8	ENSMUST00000168622.2	1852	2	399	464	399	-464	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGATTGCTTCTTACTG	2366	False	NA	NA	False	TATAAA	-19	NA	55114596	55113517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55114254_55114343
ES.1078.1	chr1	-	2183	2	Antisense	novelGene_ENSMUSG00000073609.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGGCAT	-8	True	NA	NA	False	NA	NA	NA	93754627	93751265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93753115_93754293
ES.10780.1	chr14	-	178	1	Intergenic	novelGene_9031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTATACACTTG	NA	False	NA	NA	False	NA	NA	NA	55117016	55116838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55116800_55117000
ES.10781.1	chr14	+	3520	4	FSM	ENSMUSG00000089682.11	ENSMUST00000022806.10	3509	4	-5	-6	-5	6	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTTGTGACTTCT	NA	False	NA	31	True	AATAAA	-35	NA	55120828	55125697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55122840
ES.10781.10	chr14	+	2607	1	Genic_Genomic	ENSMUSG00000089682.11	novel	NA	NA	NA	NA	2261	140	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	55123224	55125831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_55123200_55125800
ES.10781.11	chr14	+	1675	7	NIC	ENSMUSG00000022194.16	novel	680	6	NA	NA	-4	749	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	925.636837834124	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55129952	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55130196_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.12	chr14	+	1638	6	FSM	ENSMUSG00000022194.16	ENSMUST00000140691.8	680	6	-4	-954	-4	3	multi-exon	FALSE	canonical	3	16	junction_1	1013.88019016055	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	NA	False	NA	2	True	NA	NA	NA	55129952	55135594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55130196_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.13	chr14	+	1894	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-114	-750	-114	750	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGGCCCTTTGGATG	NA	False	NA	14	True	AATAAA	-13	NA	55131490	55136376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.14	chr14	+	1138	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-94	-14	-94	14	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTGTGGAAGGGGGG	NA	False	NA	48	True	NA	NA	NA	55131510	55135640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.15	chr14	+	4394	3	NIC	ENSMUSG00000022194.16	novel	1775	5	NA	NA	-90	755	intron_retention	FALSE	canonical	3	2245	junction_1	155	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131514	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55131952_55132304_55133154_55133273
ES.10781.16	chr14	+	1906	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	-96	-35	-89	-3	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACAGAAGATGACCTT	NA	False	NA	-4	True	NA	NA	NA	55131515	55135588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
ES.10781.17	chr14	+	1922	6	NIC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	-62	749	intron_retention	FALSE	canonical	3	2071	junction_5	223.846018503792	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131542	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134730_55135473
ES.10781.18	chr14	+	2561	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-32	-768	-32	755	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131572	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.19	chr14	+	4456	2	ISM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-32	-755	-32	755	intron_retention	FALSE	canonical	3	2245	junction_1	0	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131572	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55131952_55132304
ES.10781.2	chr14	+	1649	8	NIC	ENSMUSG00000092232.2	novel	1245	9	NA	NA	-63	781	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1114.29847978036	1639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55120834	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55120964_55121253_55121342_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.20	chr14	+	1751	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	-9	19	-9	3	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	NA	False	NA	2	True	NA	NA	NA	55131595	55135594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.21	chr14	+	2619	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	-16	-828	-9	755	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131595	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
ES.10781.22	chr14	+	937	2	NNC	ENSMUSG00000022194.16	novel	1775	5	NA	NA	-9	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131595	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131820_55135662
ES.10781.23	chr14	+	1605	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	-7	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131597	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131659_55131839_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.24	chr14	+	2543	6	NNC	ENSMUSG00000022194.16	novel	1761	6	NA	NA	-6	749	intron_retention	FALSE	canonical	0	0	junction_4	982.400203583041	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131598	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134394_55134497_55134577
ES.10781.25	chr14	+	787	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAGAGGAAAGAAG	NA	False	NA	24	True	AAAAAG	-22	NA	55131598	55135540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131664_55131826_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.26	chr14	+	1736	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	-5	749	intron_retention	FALSE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131599	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131654_55131701_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.29	chr14	+	2443	7	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	-5	749	intron_retention	FALSE	non_canonical	0	0	junction_1	934.730561296795	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131599	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131620_55131704_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.30	chr14	+	3642	4	ISM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	-4	-755	-4	755	intron_retention	FALSE	canonical	3	2245	junction_1	150.813350425838	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131600	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273
ES.10781.32	chr14	+	1623	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	-3	747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAATTGGCCCTTTGG	NA	False	NA	11	True	AATAAA	-10	NA	55131601	55136373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131665_55131821_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.33	chr14	+	1690	7	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	-3	749	intron_retention	TRUE	non_canonical	0	0	junction_1	931.472430557603	1613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131601	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131889_55132333_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.37	chr14	+	2202	3	NNC	ENSMUSG00000022194.16	novel	1761	6	NA	NA	-3	749	intron_retention	FALSE	non_canonical	0	0	junction_2	1122.5	1613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131601	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131952_55132304_55132359_55134577
ES.10781.4	chr14	+	1666	8	Fusion	ENSMUSG00000022194.16_ENSMUSG00000089682.11	novel	903	5	NA	NA	52	749	multi-exon	FALSE	canonical	3	17	junction_2	1110.05826285775	1639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55121015	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55121162_55121253_55121342_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.40	chr14	+	1684	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	1	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131605	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131781_55131874_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.41	chr14	+	2466	7	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	1	749	intron_retention	FALSE	non_canonical	0	0	junction_1	934.730561296795	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131605	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131680_55131735_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.42	chr14	+	1724	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	1	749	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131605	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131796_55131849_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.44	chr14	+	3583	4	NNC	ENSMUSG00000022194.16	novel	1775	5	NA	NA	3	747	intron_retention	FALSE	non_canonical	0	0	junction_3	1143.76289306637	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAATTGGCCCTTTGG	NA	False	NA	11	True	AATAAA	-10	NA	55131607	55136373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131952_55132304_55132420_55133085_55133591_55133754
ES.10781.45	chr14	+	1647	7	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	3	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	934.730561296795	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGGAAAGAAGGA	NA	False	NA	26	True	AAAAAG	-24	NA	55131607	55135542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131808_55131847_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.46	chr14	+	1784	2	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	-3	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131608	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131765_55134747
ES.10781.47	chr14	+	2466	7	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	9	749	intron_retention	FALSE	canonical	0	0	junction_1	1200.42502889602	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131621	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131774_55131874_55132013_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.48	chr14	+	1665	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	12	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131624	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131775_55131868_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.49	chr14	+	796	8	NNC	ENSMUSG00000022194.16	novel	826	8	NA	NA	15	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	865.393127605092	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAATTAAAAAAAAAAAAGAA	NA	False	NA	-21	True	NA	NA	NA	55131627	55135571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131664_55131819_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.5	chr14	+	2086	9	Fusion	ENSMUSG00000022194.16_ENSMUSG00000089682.11	novel	903	5	NA	NA	70	747	multi-exon	FALSE	canonical	2	4	junction_2	1190.24923204134	1639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAATTGGCCCTTTGG	NA	False	NA	11	True	AATAAA	-10	NA	55121033	55136373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55121162_55121253_55121342_55121830_55122271_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.50	chr14	+	3531	5	NIC	ENSMUSG00000022194.16	novel	1761	6	NA	NA	18	755	intron_retention	FALSE	canonical	3	2245	junction_1	135.462863914801	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131630	55136381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55134497_55134577
ES.10781.51	chr14	+	1724	7	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	159	749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	907.725806005805	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55131771	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55131952_55132304_55132420_55132973_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.52	chr14	+	1523	7	FSM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	-38	-785	7	750	multi-exon	FALSE	canonical	3	24	junction_1	922.719651657834	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGGCCCTTTGGATG	NA	False	NA	14	True	AATAAA	-13	NA	55132036	55136376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.53	chr14	+	2246	6	FSM	ENSMUSG00000022194.16	ENSMUST00000141446.8	912	6	24	-1358	-5	746	multi-exon	FALSE	canonical	3	24	junction_1	1010.69342532738	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAAATTGGCCCTTTG	NA	False	NA	10	True	AATAAA	-9	NA	55132053	55136372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.54	chr14	+	1653	6	ISM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	479	-749	9	749	3prime_fragment	FALSE	canonical	3	2071	junction_5	209.02210409428	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55132083	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10781.55	chr14	+	2060	4	ISM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	1010	-782	795	747	intron_retention	FALSE	canonical	3	2375	junction_3	116.584733134317	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAATTGGCCCTTTGG	NA	False	NA	11	True	AATAAA	-10	NA	55133084	55136373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.56	chr14	+	657	3	NNC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	2406	749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1035.5	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55134695	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55134730_55135473_55135660_55135938
ES.10781.6	chr14	+	2453	6	Fusion	ENSMUSG00000022194.16_ENSMUSG00000089682.11	novel	903	5	NA	NA	90	749	intron_retention	FALSE	canonical	3	17	junction_2	1261.87393982125	1639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55121053	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55121162_55121253_55121342_55132304_55132420_55133085_55133154_55133273_55133381_55134408
ES.10781.7	chr14	+	2362	7	Fusion	ENSMUSG00000022194.16_ENSMUSG00000089682.11	novel	903	5	NA	NA	100	749	intron_retention	FALSE	canonical	3	17	junction_2	1190.78680804845	1639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55121063	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55121162_55121253_55121342_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.8	chr14	+	2355	6	ISM	ENSMUSG00000092232.2	ENSMUST00000134077.2	1245	9	1194	-781	1194	781	intron_retention	FALSE	canonical	2	7	junction_1	1017.46539990311	1637	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGGCCCTTTGGAT	NA	False	NA	13	True	AATAAA	-12	NA	55122091	55136375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55122271_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ES.10781.9	chr14	+	786	7	ISM	ENSMUSG00000092232.2	ENSMUST00000134077.2	1245	9	1232	6	1232	-6	3prime_fragment	FALSE	canonical	2	7	junction_1	928.919159860295	1595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACAGAAGATGACCTT	NA	False	NA	-4	True	NA	NA	NA	55122129	55135588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55122271_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ES.10782.1	chr14	-	135	1	Intergenic	novelGene_9032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	55131125	55130990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55131000_55131100
ES.10783.1	chr14	+	168	1	Intergenic	novelGene_9033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAACAACAACAAT	NA	False	NA	NA	False	NA	NA	NA	55139305	55139473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55139300_55139500
ES.10784.1	chr14	-	3245	6	NIC	ENSMUSG00000022199.13	novel	2294	9	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_4	3.87814388593306	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCCTCCCTGTGTTGTC	NA	False	NA	-2	True	AATAAA	-36	NA	55150531	55144188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55147283_55149698_55150191_55150323
ES.10784.2	chr14	-	2359	8	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	-7	3	intron_retention	FALSE	canonical	1	1	junction_4	3.10365156891435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCCCTCCCTGTGTT	NA	False	NA	-5	True	AATAAA	-33	NA	55150567	55144191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
ES.10784.3	chr14	-	2367	10	FSM	ENSMUSG00000022199.13	ENSMUST00000228495.3	2340	10	-15	-12	-10	-1	multi-exon	FALSE	canonical	2	4	junction_6	2.24982852570184	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGACTTCCCTCCCTG	NA	False	NA	-9	True	AATAAA	-29	NA	55150570	55144195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55144817_55144975_55145088_55145342_55145561_55145717_55145824_55145958_55146105_55146279_55146446_55147127_55147283_55149505_55149610_55149698_55150191_55150323
ES.10784.5	chr14	-	3355	7	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	2	-1	intron_retention	FALSE	canonical	2	6	junction_2	1.88561808316413	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATAGCCTGGACTTCCCT	NA	False	NA	-14	True	AATAAA	-24	NA	55150549	55144200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55147283_55149505_55149610_55149698_55150191_55150323
ES.10784.6	chr14	-	4004	3	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	NA	False	NA	-15	True	AATAAA	-23	NA	55150563	55144201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55145824_55145958_55147283_55149505
ES.10784.7	chr14	-	3322	5	NIC	ENSMUSG00000022199.13	novel	2595	7	NA	NA	-23	2	intron_retention	FALSE	canonical	0	0	junction_3	4.32290411644765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATCATAGCCTGGACT	NA	False	NA	-19	True	AATAAA	-19	NA	55150370	55144205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55144817_55144975_55145824_55145958_55147283_55149698_55150191_55150323
ES.10784.8	chr14	-	2174	9	NIC	ENSMUSG00000022199.13	novel	2340	10	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.93417364857638	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATGAGCATATCATAG	NA	False	NA	-27	True	AATAAA	-11	NA	55150561	55144213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55144817_55144975_55145088_55145342_55145561_55145717_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
ES.10785.1	chr14	-	3451	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	-841	95	-629	3	multi-exon	TRUE	canonical	3	20	junction_2	3.32264954516723	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTTCTTGAAAGCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55164212	55154086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
ES.10785.2	chr14	-	3137	7	NNC	ENSMUSG00000022203.8	novel	2705	6	NA	NA	-384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.94009836749896	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTGCTTCTTGAAAGC	NA	False	NA	NA	False	AATAAA	-18	NA	55163967	55154089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158492_55158557_55158639_55162894
ES.10785.3	chr14	-	3328	7	NNC	ENSMUSG00000022203.8	novel	2705	6	NA	NA	-624	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.94009836749896	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCTGCTTCTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	55164207	55154092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158446_55158557_55158639_55162894
ES.10785.4	chr14	-	3240	6	NIC	ENSMUSG00000022203.8	novel	2705	6	NA	NA	-592	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.507140429251	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTCTGCTTCTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	55164175	55154093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158472_55162894
ES.10785.5	chr14	-	3358	7	NIC	ENSMUSG00000022203.8	novel	2705	6	NA	NA	-629	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	9.58586922969894	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACTCTGCTTCTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	55164212	55154093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158472_55158557_55158639_55162894
ES.10786.1	chr14	-	3651	21	ISM	ENSMUSG00000040752.17	ENSMUST00000226297.2	6008	39	9657	-1	959	1	3prime_fragment	FALSE	canonical	0	0	junction_4	1.06183802907976	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCACCCTGTCCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	55194405	55179381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55179459_55179809_55179945_55180604_55180701_55181734_55182011_55182117_55182244_55183769_55183974_55184370_55184680_55185537_55185663_55185748_55185915_55186068_55186253_55186794_55186992_55187301_55187421_55187508_55187636_55187720_55188111_55189702_55189794_55190030_55190177_55190410_55190588_55190745_55190989_55191154_55191411_55193958_55194096_55194335
ES.10787.2	chr14	-	5857	34	ISM	ENSMUSG00000053093.17	ENSMUST00000102803.11	6135	41	2952	4	2017	-4	3prime_fragment	TRUE	canonical	0	0	junction_7	1.35857647099757	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGCCTCTAGACTC	NA	False	NA	NA	False	AATAAA	-19	NA	55229131	55208144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55208268_55208833_55208969_55209081_55209178_55210144_55210421_55210527_55210654_55210758_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761_55225933_55226231_55226382_55226500_55226620_55226711_55226851_55227434_55227539_55227761_55227861_55228198_55228263_55228372_55228466_55228548
ES.10787.3	chr14	-	183	1	Intergenic	novelGene_9034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAGGAAAAGCCCC	NA	False	NA	NA	False	NA	NA	NA	55218335	55218152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55218200_55218300
ES.10788.1	chr14	+	1183	12	NNC	ENSMUSG00000022204.10	novel	427	3	NA	NA	-23726	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	578.158432917586	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	7177	False	NA	12	True	AATAAA	-17	NA	55229184	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55229249_55234110_55234171_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.10	chr14	+	1035	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	101	-6	combination_of_known_splicesites	FALSE	canonical	2	17	junction_9	477.441354423326	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253011	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55261445
ES.10788.13	chr14	+	5779	8	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	110	-6	intron_retention	FALSE	canonical	2	17	junction_7	507.441602149288	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253020	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55261445
ES.10788.14	chr14	+	6083	8	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	111	-6	intron_retention	TRUE	canonical	0	0	junction_5	517.706125763508	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253021	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55253046_55253625_55253686_55254522_55258649_55258850_55259402_55259494_55260377_55260424_55260664_55260792_55260851_55261445
ES.10788.15	chr14	+	5909	8	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	112	-9	intron_retention	FALSE	canonical	3	1001	junction_1	185.557626232557	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGTGAAAGACATTTTTT	NA	False	NA	9	True	AATAAA	-14	NA	55253022	55261585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55258649_55258850_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.16	chr14	+	1338	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	118	-256	118	256	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTGTTGACCTGTCCA	NA	False	NA	NA	False	AATAAA	-20	NA	55253028	55261850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.17	chr14	+	1199	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	118	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	455.430302022164	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253028	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55253169_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.18	chr14	+	1216	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	125	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	454.845907973239	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253035	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55253193_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.19	chr14	+	3756	7	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	-2443	3	intron_retention	FALSE	canonical	3	1280	junction_3	107.690399861001	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGCCATACATTGT	NA	False	NA	21	True	AATAAA	-26	NA	55255902	55261597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55258649_55258850_55258936_55259012_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.2	chr14	+	1166	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	36	-2	36	2	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTTGCCATACATTG	NA	False	NA	20	True	AATAAA	-25	NA	55252946	55261596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.3	chr14	+	5035	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	82	1	intron_retention	FALSE	canonical	3	1001	junction_1	180.577468755718	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTTTGCCATACATT	NA	False	NA	19	True	AATAAA	-24	NA	55252992	55261595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55253686_55254522_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.4	chr14	+	1102	11	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	95	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	461.781376844065	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGCCATACATTGTA	NA	False	NA	22	True	AATAAA	-27	NA	55253005	55261598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260513_55260664_55260792_55260851_55261445
ES.10788.5	chr14	+	1176	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	95	-6	intron_retention	FALSE	canonical	3	1001	junction_1	184.940230585151	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACATTTTTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	55253005	55261588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.6	chr14	+	5304	8	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	96	-5	intron_retention	FALSE	canonical	3	1001	junction_1	196.895807938294	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGACATTTTTTGCCA	NA	False	NA	13	True	AATAAA	-18	NA	55253006	55261589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55253046_55253625_55253686_55254522_55258649_55258850_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10788.7	chr14	+	4749	10	NNC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	98	-7	intron_retention	FALSE	canonical	0	0	junction_3	477.07009604796	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAAGACATTTTTTGC	NA	False	NA	11	True	AATAAA	-16	NA	55253008	55261587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55253046_55253625_55253686_55254522_55258172_55258510_55258649_55258850_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ES.10789.1	chr14	-	177	1	Intergenic	novelGene_9035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACACAGCC	NA	False	NA	NA	False	NA	NA	NA	55283440	55283263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55283300_55283400
ES.1079.1	chr1	-	177	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGATAGAAGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	93755363	93755186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93755200_93755400
ES.10790.1	chr14	+	2090	2	NNC	ENSMUSG00000093452.5	novel	4375	5	NA	NA	19568	7323	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAATCCCCTGACTACA	NA	False	NA	NA	False	NA	NA	NA	55310971	55320653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55311850_55319441
ES.10791.1	chr14	+	2591	1	Antisense	novelGene_ENSMUSG00000040721.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCAACCCAGCAGCATC	NA	False	NA	NA	False	NA	NA	NA	55326835	55329426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_55326800_55329400
ES.10792.1	chr14	-	10466	10	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	-55	-19	intron_retention	TRUE	canonical	1	2	junction_9	15.3767501262277	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTGGGATAATTAGAAG	NA	False	NA	NA	False	NA	NA	NA	55329836	55297737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329431
ES.10792.12	chr14	-	1323	1	NIC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	8647	-2003	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGGCAAAAAAGTGGGG	NA	False	NA	NA	False	AAAACA	-29	NA	55301044	55299721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55299700_55301000
ES.10792.13	chr14	-	6908	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	18209	2003	-1881	-2003	3prime_fragment	FALSE	canonical	3	30	junction_7	9.50986330080512	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGGCAAAAAAGTGGGG	NA	False	NA	NA	False	AAAACA	-29	NA	55311572	55299721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669
ES.10792.14	chr14	-	4536	8	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	17042	5775	-3048	170	internal_fragment	FALSE	canonical	3	30	junction_6	5.44358825235933	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCGCTTTCTGCCCTTT	NA	False	NA	NA	False	NA	NA	NA	55312739	55303493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669
ES.10792.15	chr14	-	4733	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-52	5949	-52	-4	5prime_fragment	FALSE	canonical	3	30	junction_6	5.85101486923423	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGGCTTTGAGTTA	NA	False	NA	NA	False	AATGAA	-32	NA	55329833	55303667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
ES.10792.16	chr14	-	4744	9	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	-30	-4	intron_retention	FALSE	canonical	1	2	junction_8	13.1666007382316	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGGCTTTGAGTTA	NA	False	NA	NA	False	AATGAA	-32	NA	55329811	55303667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329431
ES.10792.17	chr14	-	4581	8	NIC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	7	-262	intron_retention	FALSE	canonical	3	30	junction_7	5.44358825235933	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACAACAGCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	55329492	55303925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55310522_55310669_55312742_55329464
ES.10792.18	chr14	-	3883	9	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	5	-707	intron_retention	FALSE	canonical	3	8	junction_7	11.4673449411797	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTCTCTCACCTTCA	NA	False	NA	NA	False	NA	NA	NA	55329776	55304370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310432_55310669_55312742_55329464
ES.10792.19	chr14	-	4051	9	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-73	6652	-73	-707	5prime_fragment	FALSE	canonical	3	30	junction_6	5.85101486923423	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTCTCTCACCTTCA	NA	False	NA	NA	False	NA	NA	NA	55329854	55304370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
ES.10792.2	chr14	-	10183	10	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	-44	-168	intron_retention	FALSE	canonical	3	8	junction_8	14.0396264591018	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGTGTATAAGGAAAAGG	NA	False	NA	NA	False	TATAAA	-16	NA	55329825	55297886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310432_55310669_55312742_55329464
ES.10792.20	chr14	-	3716	9	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	7	-709	intron_retention	FALSE	canonical	0	0	junction_8	13.7789468030035	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCCGTCTCTCACCTT	NA	False	NA	NA	False	NA	NA	NA	55329492	55304372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329435
ES.10792.21	chr14	-	3121	1	FSM	ENSMUSG00000040721.10	ENSMUST00000188534.2	2471	1	978	-1628	978	1628	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACCAGGGCTTACGGC	NA	False	NA	NA	False	AATAAA	-19	NA	55328521	55325400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55325400_55328500
ES.10792.3	chr14	-	7271	8	ISM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	19684	313	-406	-313	3prime_fragment	FALSE	canonical	3	30	junction_7	9.53190132434987	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGTTAACAGATGTCGA	NA	False	NA	NA	False	NA	NA	NA	55310097	55298031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003
ES.10792.4	chr14	-	9101	10	FSM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	-78	1374	-78	-1374	multi-exon	FALSE	canonical	3	30	junction_7	9.6966329907873	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTGTTTTACTGTTT	NA	False	NA	-3	True	AAAAAG	-38	NA	55329859	55299092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
ES.10792.5	chr14	-	5498	9	NIC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	29	-1393	intron_retention	FALSE	canonical	0	0	junction_1	13.2611980982112	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTTTTTGTTTTGTTT	NA	False	NA	-22	True	AATATA	-42	NA	55329752	55299111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55301029_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
ES.10792.6	chr14	-	8876	10	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	36	-1395	intron_retention	FALSE	canonical	3	8	junction_8	14.0396264591018	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTCTTTTTGTTTTGT	NA	False	NA	-24	True	AATATA	-40	NA	55329745	55299113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310432_55310669_55312742_55329464
ES.10792.7	chr14	-	6888	10	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	-48	-1396	intron_retention	FALSE	canonical	0	0	junction_2	18.0664069955372	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTCTTTTTGTTTTG	NA	False	NA	-25	True	AATATA	-39	NA	55329829	55299114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55301029_55301261_55302668_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310432_55310669_55312742_55329464
ES.10792.9	chr14	-	9896	10	NNC	ENSMUSG00000040721.10	novel	10397	10	NA	NA	-774	-1399	intron_retention	FALSE	canonical	0	0	junction_9	15.8916081589166	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTGTTCTTTTTGTT	NA	False	NA	-28	True	AATATA	-36	NA	55318683	55299117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55317468
ES.10793.1	chr14	+	2828	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	1	1	1	-1	multi-exon	FALSE	canonical	3	37	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGGTCTTTATTTCCGT	NA	False	NA	6	True	AATAAA	-17	NA	55332241	55336442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55333464_55334836
ES.10793.2	chr14	+	4155	1	NIC	ENSMUSG00000100162.3	novel	4242	7	NA	NA	39334	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGTGGGTCTTTATTT	NA	False	NA	2	True	AATAAA	-13	NA	55332283	55336438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55332300_55336400
ES.10793.3	chr14	+	2504	2	NNC	ENSMUSG00000045691.15	novel	2830	2	NA	NA	308	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGGGTCTTTATTTCCG	NA	False	NA	5	True	AATAAA	-16	NA	55332548	55336441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55333448_55334836
ES.10794.1	chr14	+	5687	2	Antisense	novelGene_ENSMUSG00000022208.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTTATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	55337651	55344326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_55342466_55343453
ES.10795.1	chr14	-	2965	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	-16	-276	-16	1	multi-exon	TRUE	canonical	3	99	junction_4	12.8308372870802	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGTTTTGATGGCTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	55344066	55336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.10	chr14	-	3014	20	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	4	intron_retention	FALSE	canonical	3	99	junction_4	13.0194825245766	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTGTGAAGTGGCATAA	NA	False	NA	-18	True	AATAAA	-20	NA	55344018	55336302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.11	chr14	-	2851	19	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	9	junction_14	30.4434813310757	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGCTGTGAAGTGGC	NA	False	NA	-22	True	AATAAA	-16	NA	55344008	55336306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.12	chr14	-	3788	15	NIC	ENSMUSG00000040701.17	novel	3031	20	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	9	junction_10	33.7055073317373	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55344021	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55340240_55340393_55340508_55340659_55340965_55341268_55341350_55341819_55341916_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.14	chr14	-	2978	20	NNC	ENSMUSG00000040701.17	novel	2596	22	NA	NA	-52	-2	intron_retention	FALSE	canonical	0	0	junction_17	31.8996001155912	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55343776	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342369_55342484_55342627_55342762_55342888_55343381
ES.10795.15	chr14	-	4032	15	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	99	junction_4	13.7694204226434	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55343993	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338980_55339054_55339145_55339767_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55342116_55342287_55342385_55342484_55343587_55343964
ES.10795.16	chr14	-	2620	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_21	29.2612751298063	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55343752	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343717
ES.10795.17	chr14	-	3755	17	NIC	ENSMUSG00000040701.17	novel	3031	20	NA	NA	7	-2	intron_retention	FALSE	canonical	3	9	junction_12	31.2507499910002	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55343998	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.18	chr14	-	4406	16	NIC	ENSMUSG00000040701.17	novel	3031	20	NA	NA	0	-2	intron_retention	FALSE	canonical	3	99	junction_4	13.0581604966226	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55344018	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55342385_55342484_55343587_55343964
ES.10795.19	chr14	-	2523	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	30.3714915669284	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55344027	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55343381_55343587_55343964
ES.10795.2	chr14	-	2793	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	30.3714915669284	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGTTTTGATGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	55344021	55336032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55343381_55343587_55343964
ES.10795.20	chr14	-	2789	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	99	junction_4	12.7022635778038	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55344018	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.21	chr14	-	2840	21	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-29	-2	intron_retention	FALSE	canonical	1	6	junction_20	29.9230262506986	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTTAGCTGTGAAGTG	NA	False	NA	-24	True	AATAAA	-14	NA	55343753	55336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343717
ES.10795.22	chr14	-	2596	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.1655305114951	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTAGCTGTGAAGT	NA	False	NA	-25	True	AATAAA	-13	NA	55344018	55336309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338620_55338851_55338980_55339083_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.23	chr14	-	2598	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.1732713482459	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTAGCTGTGAAGT	NA	False	NA	-25	True	AATAAA	-13	NA	55343990	55336309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340008_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.24	chr14	-	5063	9	NIC	ENSMUSG00000040701.17	novel	3031	20	NA	NA	-3	2	intron_retention	FALSE	canonical	3	108	junction_7	11.8736841376213	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTAGCTGTGAAGT	NA	False	NA	-25	True	AATAAA	-13	NA	55344021	55336309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55339145_55339767_55339891_55339964_55340240_55340393_55340508_55340659_55340965_55341268_55341350_55341819_55342888_55343381_55343587_55343964
ES.10795.25	chr14	-	3921	17	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-6	0	intron_retention	FALSE	canonical	3	99	junction_4	12.8737863505652	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGGTGTTAGCTGTGAA	NA	False	NA	-27	True	AATAAA	-11	NA	55344011	55336311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55343587_55343964
ES.10795.26	chr14	-	2758	20	FSM	ENSMUSG00000040701.17	ENSMUST00000151314.9	3031	20	-8	281	6	-1	multi-exon	FALSE	canonical	3	9	junction_15	29.9717318342013	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAGGTGTTAGCTGTGA	NA	False	NA	-28	True	AATAAA	-10	NA	55343999	55336312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.27	chr14	-	2584	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	30.0171201150277	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAGGTGTTAGCTGTGA	NA	False	NA	-28	True	AATAAA	-10	NA	55344066	55336312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.28	chr14	-	3394	18	NIC	ENSMUSG00000040701.17	novel	2551	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	9	junction_15	31.3528859948747	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAGGTGTTAGCTGTGA	NA	False	NA	-28	True	AATAAA	-10	NA	55344005	55336312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342287_55342385_55342484_55343587_55343964
ES.10795.3	chr14	-	2913	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.9304383809776	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGGGAGTTTTGATGGC	NA	False	NA	NA	False	AATAAA	-10	NA	55344005	55336034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337333_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343590_55343964
ES.10795.30	chr14	-	2586	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	-17	104	-17	-99	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGCGTACAAATTAGAAG	NA	False	NA	3	True	AATAAA	-42	NA	55344067	55336410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.31	chr14	-	2879	20	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	6	76	intron_retention	FALSE	canonical	0	0	junction_5	42.134332070868	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAACTTTATTTAAAGG	NA	False	NA	-21	True	AATAAA	-18	NA	55343999	55336434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338525_55339234_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.32	chr14	-	2481	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-15	76	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_21	29.2612751298063	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAACTTTATTTAAAGG	NA	False	NA	-21	True	AATAAA	-18	NA	55343739	55336434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343717
ES.10795.33	chr14	-	2720	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-2	75	intron_retention	FALSE	canonical	3	99	junction_4	13.1273569312333	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAACTTTATTTAAAG	NA	False	NA	-22	True	AATAAA	-17	NA	55344007	55336435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.4	chr14	-	2430	19	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-216	-5	intron_retention	FALSE	canonical	0	0	junction_1	32.492401770868	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGGGGAGTTTTGATG	NA	False	NA	NA	False	AATAAA	-8	NA	55342564	55336036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336254_55336507_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484
ES.10795.5	chr14	-	3044	19	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-2	19	intron_retention	FALSE	canonical	3	99	junction_4	13.2045867451848	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTGAGTGATTCTCT	NA	False	NA	-3	True	AATAAA	-35	NA	55344007	55336287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.6	chr14	-	2709	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	-17	-19	-17	19	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTGAGTGATTCTCT	NA	False	NA	-3	True	AATAAA	-35	NA	55344067	55336287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10795.7	chr14	-	2609	22	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-5	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	30.4217519744882	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCATAATTTGAGTGATT	NA	False	NA	-7	True	AATAAA	-31	NA	55344010	55336291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342801_55342888_55343381_55343587_55343964
ES.10795.8	chr14	-	3017	20	NNC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	-1	6	intron_retention	FALSE	non_canonical	0	0	junction_9	41.2887943991622	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGAAGTGGCATAATT	NA	False	NA	-16	True	AATAAA	-22	NA	55343992	55336300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338980_55339054_55339145_55339767_55339887_55339964_55340029_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ES.10796.1	chr14	-	3276	2	NNC	ENSMUSG00000022208.13	novel	4017	3	NA	NA	208	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	55352801	55348948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55351636_55352212
ES.10797.1	chr14	-	391	1	Intergenic	novelGene_9036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGGTATTTCTAACCC	NA	False	NA	NA	False	NA	NA	NA	55359352	55358961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55359000_55359400
ES.10797.2	chr14	-	179	1	Intergenic	novelGene_9037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	55359355	55359176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55359200_55359400
ES.10798.1	chr14	-	170	1	Intergenic	novelGene_9038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAACAAAATGT	NA	False	NA	NA	False	NA	NA	NA	55375748	55375578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55375600_55375700
ES.10799.1	chr14	-	159	1	Intergenic	novelGene_9039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55392214	55392055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55392100_55392200
ES.108.1	chr1	-	171	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGAGAGCTGT	7703	False	NA	NA	False	NA	NA	NA	13088404	13088233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13088200_13088400
ES.1080.1	chr1	-	1923	1	Antisense	novelGene_ENSMUSG00000073609.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCAGAGAAAAGAGATAAA	NA	False	NA	NA	False	NA	NA	NA	93760788	93758865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_93758900_93760800
ES.1080.2	chr1	-	174	1	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCCCATAATTATACT	NA	False	NA	NA	False	NA	NA	NA	93759336	93759162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93759200_93759300
ES.10800.1	chr14	-	226	1	Intergenic	novelGene_9040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTGTTTTTTTTGT	3112	False	NA	NA	False	NA	NA	NA	55678685	55678459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55678500_55678700
ES.10801.1	chr14	-	148	1	Intergenic	novelGene_9041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAAATAGGGCCG	9850	False	NA	NA	False	NA	NA	NA	55712123	55711975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55712000_55712100
ES.10802.1	chr14	+	1389	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	1	2	1	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCGTGTTTATTTC	NA	False	NA	9	True	AATAAA	-24	NA	55716215	55727795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ES.10802.3	chr14	+	1349	7	NIC	ENSMUSG00000022210.8	novel	1392	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	56	junction_3	11.6285090283416	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCGTGTTTATTTC	NA	False	NA	9	True	AATAAA	-24	NA	55716351	55727795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724769_55725040_55725176_55725616_55725673_55727275
ES.10802.4	chr14	+	1775	6	NIC	ENSMUSG00000022210.8	novel	1392	8	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	56	junction_3	9.77752524926425	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAATCAGTGCGTGT	NA	False	NA	2	True	AATAAA	-17	NA	55716359	55727788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724769_55725040_55725673_55727275
ES.10802.5	chr14	+	887	4	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	31	6	0	0	intron_retention	FALSE	canonical	3	56	junction_3	6.12825877028341	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCCTAGTCTCTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	55716362	55725028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549
ES.10803.1	chr14	+	4632	40	NNC	ENSMUSG00000022211.10	novel	4602	40	NA	NA	-47	-18	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.14325624664656	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCACTGTCTG	NA	False	NA	NA	False	GGGGCT	-23	NA	55728500	55745703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55728741_55730328_55730424_55730676_55730728_55730834_55730895_55730980_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740384_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141_55745262_55745376
ES.10803.2	chr14	+	2465	14	NNC	ENSMUSG00000022211.10	novel	3332	21	NA	NA	2156	-18	intron_retention	FALSE	canonical	0	0	junction_1	0.910166120476864	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCACTGTCTG	NA	False	NA	NA	False	GGGGCT	-23	NA	55737244	55745703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55737323_55737749_55737926_55738688_55738777_55738915_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744839_55745015_55745141_55745262_55745344
ES.10804.1	chr14	+	118	1	Intergenic	novelGene_9042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCCCTCTTTTGGCCTC	795	False	NA	NA	False	NA	NA	NA	55765502	55765620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55765500_55765600
ES.10805.1	chr14	+	168	1	Antisense	novelGene_ENSMUSG00000115778.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCTTTTAAAAAAAAAAGA	293	False	NA	NA	False	NA	NA	NA	55769124	55769292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_55769100_55769300
ES.10806.1	chr14	+	157	1	Intergenic	novelGene_9043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATACATTTAAA	4104	False	NA	NA	False	NA	NA	NA	55772935	55773092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55772900_55773100
ES.10807.1	chr14	+	2325	8	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	-23	4	intron_retention	FALSE	canonical	3	50	junction_4	552.35750771265	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTCTGCATAGGCTT	8868	False	NA	35	True	NA	NA	NA	55777699	55786395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.10	chr14	+	3378	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	24	-2	24	2	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAAGTTTATTTTA	8915	False	NA	10	True	NA	NA	NA	55777746	55787476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.11	chr14	+	4608	10	FSM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	30	-13	30	13	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTTCAAATAAAATGGAAT	8921	False	NA	NA	False	NA	NA	NA	55777752	55788712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.12	chr14	+	2896	7	ISM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	-93	2926	30	1532	5prime_fragment	FALSE	canonical	3	1356	junction_5	98.772465798926	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTAATTTCTCTTT	8921	False	NA	NA	False	NA	NA	NA	55777752	55784355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663
ES.10807.13	chr14	+	2920	8	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	30	0	intron_retention	FALSE	canonical	3	1534	junction_5	88.3409443518666	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	8921	False	NA	31	True	NA	NA	NA	55777752	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.14	chr14	+	2694	10	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	31	6	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	667.109019909373	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGAAGAATGGCTCAGT	8922	False	NA	10	True	TTTAAA	-6	NA	55777753	55787287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ES.10807.15	chr14	+	2100	10	NNC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	32	-14	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_9	476.067092480892	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGTTTGTTTCCACTTCC	8923	False	NA	17	True	NA	NA	NA	55777754	55786377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785932
ES.10807.16	chr14	+	2197	10	NNC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	505.574285367335	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	8923	False	NA	25	True	ATTAAA	-22	NA	55777754	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785264_55785492_55785593_55785761
ES.10807.17	chr14	+	2386	9	NNC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	41	-8	intron_retention	FALSE	canonical	2	18	junction_5	528.178103839036	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCAAGCCACAGGACTC	8932	False	NA	19	True	ATTAAA	-16	NA	55777763	55786321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782051_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.18	chr14	+	2512	9	FSM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	-97	2	43	-2	multi-exon	FALSE	canonical	3	1491	junction_4	96.0676031500734	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	8934	False	NA	25	True	ATTAAA	-22	NA	55777765	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.19	chr14	+	3056	9	ISM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	-78	275	45	-275	intron_retention	FALSE	canonical	3	1356	junction_5	110.491444804564	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTCTTAAAATCC	8936	False	NA	11	True	AATACA	-17	NA	55777767	55787006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.2	chr14	+	2345	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	-22	1077	-22	6	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGCATAGGCTTCC	8869	False	NA	37	True	NA	NA	NA	55777700	55786397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.20	chr14	+	4306	10	FSM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	55	264	55	-264	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCACATGAACTGAAGTAT	8946	False	NA	NA	False	AATAAA	-13	NA	55777777	55788435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.21	chr14	+	2977	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	56	367	56	-174	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGAATGCCCCACAT	8947	False	NA	NA	False	NA	NA	NA	55777778	55787107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.22	chr14	+	2959	9	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	58	-2	intron_retention	FALSE	canonical	3	50	junction_4	532.016447114185	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGGCAGTTGGAAGAAT	8949	False	NA	2	True	NA	NA	NA	55777780	55787279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.23	chr14	+	2451	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	121	828	-2	255	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCTCTGTGTTTGAGT	9012	False	NA	NA	False	AAAAAG	-25	NA	55777843	55786646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.24	chr14	+	2972	7	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-14	intron_retention	FALSE	canonical	3	1534	junction_4	95.2505468050796	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGTTTGTTTCCACTTCC	9014	False	NA	17	True	NA	NA	NA	55777845	55786377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.25	chr14	+	2128	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.589630100012	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	9014	False	NA	25	True	ATTAAA	-22	NA	55777845	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777975_55779868_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.26	chr14	+	4114	4	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1534	junction_2	95.2202126068247	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	9014	False	NA	25	True	ATTAAA	-22	NA	55777845	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55782883_55785153_55785292_55785496
ES.10807.27	chr14	+	3173	5	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-6	intron_retention	FALSE	canonical	3	1534	junction_3	82.6177190437983	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGCCACAGGACTCCC	9014	False	NA	21	True	ATTAAA	-18	NA	55777845	55786323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55782883_55785153_55785292_55785496
ES.10807.28	chr14	+	2080	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	516.755858490207	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCCACAGGACTCCCCA	9014	False	NA	23	True	ATTAAA	-20	NA	55777845	55786325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785201_55785292_55785496_55785593_55785761
ES.10807.29	chr14	+	1843	8	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	47	junction_4	563.329243635278	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9014	False	NA	31	True	NA	NA	NA	55777845	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.3	chr14	+	3051	7	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	-14	1	intron_retention	FALSE	canonical	3	1534	junction_4	87.5323749630196	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCTGTGTCTGCATAGG	8877	False	NA	32	True	NA	NA	NA	55777708	55786392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.30	chr14	+	4888	6	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1534	junction_4	78.2646791343324	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9014	False	NA	31	True	NA	NA	NA	55777845	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.31	chr14	+	2979	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	-195	0	2	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAAGTTTATTTTA	9014	False	NA	10	True	NA	NA	NA	55777845	55787476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ES.10807.32	chr14	+	2509	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	275	0	-275	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTCTTAAAATCC	9014	False	NA	11	True	AATACA	-17	NA	55777845	55787006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ES.10807.33	chr14	+	2709	8	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6	junction_2	740.75491003077	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGGCAGTTGGAAGAAT	9014	False	NA	2	True	NA	NA	NA	55777845	55787279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.34	chr14	+	3912	8	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	1534	junction_5	88.3409443518666	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAAGTTTATTTTA	9014	False	NA	10	True	NA	NA	NA	55777845	55787476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.35	chr14	+	2782	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGGCAGTTGGAAGAAT	9014	False	NA	2	True	NA	NA	NA	55777845	55787279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ES.10807.36	chr14	+	2604	9	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-2	intron_retention	FALSE	canonical	1	9	junction_4	545.415423668051	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	9014	False	NA	25	True	ATTAAA	-22	NA	55777845	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782183_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.37	chr14	+	1967	9	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	541.690178976876	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGTTTGTTTCCACTTCC	9014	False	NA	17	True	NA	NA	NA	55777845	55786377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781344_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.38	chr14	+	2518	8	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1491	junction_3	98.9988662066596	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	9014	False	NA	25	True	ATTAAA	-22	NA	55777845	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.39	chr14	+	2522	9	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-10	intron_retention	FALSE	non_canonical	0	0	junction_8	698.947422915344	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCACTTCCCTGT	9014	False	NA	21	True	NA	NA	NA	55777845	55786381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782051_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785765
ES.10807.4	chr14	+	2885	8	NNC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	66	junction_4	556.763570530066	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	8878	False	NA	25	True	ATTAAA	-22	NA	55777709	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782491_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.40	chr14	+	3605	9	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	516	intron_retention	FALSE	canonical	3	50	junction_4	532.016447114185	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACCTGAATTCTGAAAT	9014	False	NA	NA	False	AATGAA	-16	NA	55777845	55787990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.41	chr14	+	3111	9	FSM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	-17	-677	0	-275	multi-exon	FALSE	canonical	3	1491	junction_4	96.0676031500734	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACATGTCTTAAAATCC	9014	False	NA	11	True	AATACA	-17	NA	55777845	55787006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.42	chr14	+	3561	8	ISM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	-17	-958	0	6	intron_retention	FALSE	canonical	3	1491	junction_4	81.2770520114594	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGAAGAATGGCTCAGT	9014	False	NA	10	True	TTTAAA	-6	NA	55777845	55787287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.44	chr14	+	2969	1	FSM	ENSMUSG00000040618.8	ENSMUST00000226270.2	2799	1	-78	-92	0	92	mono-exon	FALSE	NA	NA	NA	NA	NA	857	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTGGCCAGGCTTAG	9014	False	NA	NA	False	NA	NA	NA	55777845	55780814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777800_55780800
ES.10807.46	chr14	+	2738	7	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	-13	intron_retention	FALSE	canonical	3	1491	junction_3	85.4731926785625	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTTTGTTTCCACTTCCC	9014	False	NA	18	True	NA	NA	NA	55777845	55786378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.47	chr14	+	5610	7	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	1534	junction_4	90.992673697758	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAGTTGGAAGAATGGC	9014	False	NA	5	True	TTTAAA	-1	NA	55777845	55787282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.48	chr14	+	2005	9	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	532.016447114185	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9015	False	NA	31	True	NA	NA	NA	55777846	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.49	chr14	+	1435	7	NNC	ENSMUSG00000040618.8	novel	2631	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	21	junction_4	615.596571537634	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9015	False	NA	31	True	NA	NA	NA	55777846	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781434_55785254_55785292_55785496_55785593_55785761
ES.10807.5	chr14	+	3868	8	FSM	ENSMUSG00000040618.8	ENSMUST00000226664.2	2631	8	-152	-1085	-5	2	multi-exon	FALSE	canonical	3	1491	junction_4	101.915130758642	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAAGTTTATTTTA	8886	False	NA	10	True	NA	NA	NA	55777717	55787476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.50	chr14	+	2343	9	ISM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	2	908	1	-18	intron_retention	FALSE	canonical	3	1356	junction_5	110.491444804564	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACGCGTTTGTTTCCAC	9016	False	NA	13	True	NA	NA	NA	55777847	55786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.51	chr14	+	5097	6	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1574	junction_1	75.9410297533553	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCCACAGGACTCCCCA	9035	False	NA	23	True	ATTAAA	-20	NA	55777866	55786325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55782505_55782663_55785292_55785496_55785593_55785761
ES.10807.52	chr14	+	2270	9	NNC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	1	-3	intron_retention	FALSE	canonical	1	18	junction_5	674.182827113684	961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCACAGGACTCCCCAT	9039	False	NA	24	True	ATTAAA	-21	NA	55777870	55786326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782051_55782341_55782491_55782663_55782883_55785153_55785292_55785496
ES.10807.53	chr14	+	3820	6	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	1534	junction_3	95.3066629360193	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9044	False	NA	31	True	NA	NA	NA	55777875	55786391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.54	chr14	+	2248	9	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	17	-2	intron_retention	FALSE	canonical	3	1356	junction_5	128.414307516725	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	9055	False	NA	25	True	ATTAAA	-22	NA	55777886	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.55	chr14	+	2174	10	NNC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	516.249939467309	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTCTGCATAGGCT	9055	False	NA	34	True	NA	NA	NA	55777886	55786394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781298_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.56	chr14	+	3651	7	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	22	-16	intron_retention	FALSE	canonical	3	6	junction_1	782.187903682144	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTTTGTTTCCACTT	9060	False	NA	15	True	NA	NA	NA	55777891	55786375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55780109_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.57	chr14	+	3156	9	ISM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	865	955	787	-3	internal_fragment	FALSE	canonical	3	1356	junction_4	130.261215927842	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCACAGGACTCCCCAT	9879	False	NA	24	True	ATTAAA	-21	NA	55778710	55786326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.58	chr14	+	3449	6	NNC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	169	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	676.934265641798	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	NA	False	NA	25	True	ATTAAA	-22	NA	55780030	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55780683_55780726_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.59	chr14	+	2795	4	ISM	ENSMUSG00000040618.8	ENSMUST00000228240.2	1656	9	2189	-1171	646	2	intron_retention	FALSE	canonical	3	1534	junction_2	89.4961203380099	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAAGTTTATTTTA	NA	False	NA	10	True	NA	NA	NA	55782046	55787476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.6	chr14	+	4158	10	FSM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	1	466	1	-466	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGCTGCCTGAATGTGT	8892	False	NA	NA	False	NA	NA	NA	55777723	55788233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10807.7	chr14	+	3184	8	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	11	7	intron_retention	FALSE	canonical	3	50	junction_4	552.35750771265	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAAGAATGGCTCAGTG	8902	False	NA	11	True	TTTAAA	-7	NA	55777733	55787288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.8	chr14	+	3043	7	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	12	-2	intron_retention	FALSE	canonical	3	1534	junction_5	73.9113583212275	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGGACTCCCCATG	8903	False	NA	25	True	ATTAAA	-22	NA	55777734	55786327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496
ES.10807.9	chr14	+	3200	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	21	179	21	14	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCTCAGTGGTTAAGA	8912	False	NA	18	True	TTTAAA	-14	NA	55777743	55787295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ES.10808.1	chr14	-	175	1	Intergenic	novelGene_9044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAACCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	55796309	55796134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55796100_55796300
ES.10809.1	chr14	+	3799	14	NNC	ENSMUSG00000022214.16	novel	2593	15	NA	NA	-148	0	intron_retention	TRUE	canonical	1	2	junction_6	55.3795937894458	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797314	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802275_55802380_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.10	chr14	+	2565	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.9189023390625	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797940	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798085_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.11	chr14	+	4958	12	NNC	ENSMUSG00000022214.16	novel	2538	15	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	61.7905018243296	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797941	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55800477_55800828_55800957_55801178_55801242_55801509_55801611_55801827_55801975_55802277_55802380_55802554_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.12	chr14	+	2698	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	27.5910366989435	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797942	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.13	chr14	+	5178	11	NNC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	4	0	intron_retention	FALSE	canonical	1	2	junction_4	55.3751749432902	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797942	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55800477_55800828_55801242_55801509_55801611_55801827_55801975_55802275_55802380_55802554_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.15	chr14	+	2882	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	37.1563848991732	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGTGTCACTTTC	NA	False	NA	15	True	AATAAA	-20	NA	55797951	55807523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798276_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.16	chr14	+	2718	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	38.3214119291669	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797953	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798276_55798692_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.17	chr14	+	2743	15	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	37.1563848991732	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797953	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798276_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.18	chr14	+	2712	15	NNC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	42.2871621373751	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797963	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798085_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802661_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.19	chr14	+	3173	14	NNC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_6	50.8766927956455	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797963	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802275_55802380_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.2	chr14	+	3613	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	-952	-1	1	0	multi-exon	TRUE	canonical	3	97	junction_1	16.6800735031656	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797475	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.20	chr14	+	5409	10	NIC	ENSMUSG00000022214.16	novel	4413	12	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	111	junction_9	14.2395727498674	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	False	NA	7	True	AATAAA	-12	NA	55797963	55807515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.21	chr14	+	3402	13	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	32	junction_1	32.2260893273344	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTGGCTCTGTGTCTG	NA	False	NA	5	True	AATAAA	-10	NA	55797963	55807513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.22	chr14	+	3177	14	NNC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_7	51.2195644942657	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797976	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802275_55802399_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.23	chr14	+	6122	9	NNC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_6	51.0941227050627	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGTCTGTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	55797976	55807518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798085_55798531_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55803251_55803314_55804475_55804704_55804858_55806479
ES.10809.24	chr14	+	2639	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	-14	-1	2	0	multi-exon	FALSE	canonical	3	32	junction_2	36.5692661191033	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797976	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.25	chr14	+	3089	14	ISM	ENSMUSG00000022214.16	ENSMUST00000150019.8	2593	15	458	-1	2	0	3prime_fragment	FALSE	canonical	3	32	junction_1	30.9676295967295	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797976	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.26	chr14	+	4969	9	NIC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	97	junction_1	15.6359961307235	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797976	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55804475_55804704_55804858_55806479
ES.10809.27	chr14	+	3194	15	NNC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_1	49.5257611794929	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797981	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798900_55799709_55799798_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.28	chr14	+	2985	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	-382	-2	13	0	multi-exon	FALSE	canonical	3	17	junction_1	34.3960278912243	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798003	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.29	chr14	+	2598	15	NNC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	49.5488318196693	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	False	NA	7	True	AATAAA	-12	NA	55798382	55807515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55798433_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804571_55804858_55806479_55806587_55806684
ES.10809.3	chr14	+	5375	12	FSM	ENSMUSG00000022214.16	ENSMUST00000153638.8	4413	12	-964	2	-1	0	multi-exon	FALSE	canonical	3	111	junction_11	13.2121907143015	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55797476	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.30	chr14	+	4845	9	NIC	ENSMUSG00000022214.16	novel	2538	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	125	junction_1	8.88731539892672	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55798422	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55800477_55800828_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55803280_55804320_55804475_55804704_55804858_55806479
ES.10809.31	chr14	+	4420	12	NIC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	111	junction_11	13.2515397514826	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55798423	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.32	chr14	+	3279	11	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	6	0	intron_retention	FALSE	canonical	3	97	junction_1	16.6099367849489	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798529	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.33	chr14	+	3437	13	NNC	ENSMUSG00000022214.16	novel	2601	15	NA	NA	623	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	52.681959804936	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55799146	55807519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802275_55802380_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.34	chr14	+	4087	9	NIC	ENSMUSG00000022214.16	novel	4413	12	NA	NA	988	0	intron_retention	FALSE	canonical	3	111	junction_8	14.4303283053436	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55799511	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55800477_55800828_55801242_55801509_55801611_55801827_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.4	chr14	+	2570	15	NNC	ENSMUSG00000022214.16	novel	2538	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	56.094854069346	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTGTCTGTGTCACT	NA	False	NA	12	True	AATAAA	-17	NA	55797477	55807520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802275_55802380_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.5	chr14	+	2479	15	NNC	ENSMUSG00000022214.16	novel	2593	15	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.863568693522	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	False	NA	7	True	AATAAA	-12	NA	55797488	55807515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55797579_55798669_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.7	chr14	+	2655	16	NIC	ENSMUSG00000022214.16	novel	2538	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.580205619507	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797506	55807522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55797579_55797897_55798085_55798692_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.8	chr14	+	2558	15	NIC	ENSMUSG00000022214.16	novel	2624	15	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	39.769296432996	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTGGCTCTGTGTCTGT	NA	False	NA	6	True	AATAAA	-11	NA	55797917	55807514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55798085_55798666_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.10809.9	chr14	+	4604	13	NIC	ENSMUSG00000022214.16	novel	2660	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	111	junction_12	13.0583625823965	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55797932	55807521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ES.1081.1	chr1	-	172	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGCGACCTCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	93773518	93773346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93773300_93773500
ES.10810.1	chr14	-	181	1	Intergenic	novelGene_9045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTTACAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	55810687	55810506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55810500_55810700
ES.10811.1	chr14	+	1105	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	8	-1	8	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTTTATTGTATGT	NA	False	NA	15	True	AATAAA	-19	NA	55815824	55818986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ES.10812.1	chr14	-	3456	4	NNC	ENSMUSG00000022217.15	novel	855	5	NA	NA	-42	2	intron_retention	FALSE	canonical	0	0	junction_3	44.2292010127045	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTATTTATTGTGTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	55822801	55818975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55819201_55819337_55819433_55819512_55822213_55822365
ES.10812.2	chr14	-	885	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	-28	-2	-28	1	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTATTTATTGTGTTT	NA	False	NA	-3	True	AATAAA	-19	NA	55822787	55818976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ES.10812.3	chr14	-	3139	1	NIC	ENSMUSG00000022217.15	novel	340	3	NA	NA	287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTATTTATTGTGTT	NA	False	NA	-4	True	AATAAA	-18	NA	55822116	55818977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55819000_55822100
ES.10812.5	chr14	-	786	5	NNC	ENSMUSG00000022217.15	novel	855	5	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.9839907768875	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTATTTATTGTGTT	NA	False	NA	-4	True	AATAAA	-18	NA	55822732	55818977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55819201_55819337_55819390_55819512_55819583_55822135_55822213_55822368
ES.10812.6	chr14	-	737	4	NIC	ENSMUSG00000022217.15	novel	855	5	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.73352769638	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACTATGTATTTATTGT	NA	False	NA	-7	True	AATAAA	-15	NA	55822738	55818980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55819201_55819512_55819583_55822135_55822213_55822368
ES.10813.1	chr14	+	4017	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	-550	18	-550	2	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGGTCCTTCTTCCT	3624	False	NA	20	True	AATAAA	-23	NA	55828614	55841132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.10	chr14	+	3611	19	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	24	0	intron_retention	FALSE	canonical	3	102	junction_4	30.3268715136011	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTTGGTGGTCCTTC	4234	False	NA	15	True	AATAAA	-18	NA	55829224	55841127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829773_55829917_55830074_55830289_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.12	chr14	+	3022	20	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	46.7324559345337	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTTGGTGGTCCTTC	4235	False	NA	15	True	AATAAA	-18	NA	55829225	55841127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.13	chr14	+	11349	23	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	32	6331	intron_retention	FALSE	canonical	3	18	junction_17	61.2540435501173	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACCTTGGTCATGTGG	4242	False	NA	3	True	NA	NA	NA	55829232	55847481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55840882_55840988_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55846258_55846377
ES.10813.14	chr14	+	3401	21	NNC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.9126848517541	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTCTTGGTGGTCCTT	4243	False	NA	14	True	AATAAA	-17	NA	55829233	55841126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830359_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.15	chr14	+	3379	21	NNC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	47.2963793540267	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGGCTTCTTGGTGGTC	4247	False	NA	11	True	AATAAA	-14	NA	55829237	55841123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833979_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.17	chr14	+	6011	26	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	59	5854	intron_retention	FALSE	canonical	3	21	junction_18	66.4325944096721	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCGGCTGGAGAGATG	4269	False	NA	NA	False	AATAAA	-13	NA	55829259	55847004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55830074_55830289_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.19	chr14	+	4155	18	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	112	0	intron_retention	FALSE	canonical	0	0	junction_6	46.7369877159541	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTTGGTGGTCCTTC	4322	False	NA	15	True	AATAAA	-18	NA	55829312	55841127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55840882_55840988
ES.10813.20	chr14	+	5078	20	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	127	0	intron_retention	FALSE	canonical	3	102	junction_6	31.2812281641413	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTTGGTGGTCCTTC	4337	False	NA	15	True	AATAAA	-18	NA	55829327	55841127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.21	chr14	+	1386	11	ISM	ENSMUSG00000047098.19	ENSMUST00000140178.2	2817	20	4374	-8	1524	-1	3prime_fragment	FALSE	canonical	3	154	junction_1	19.565275362233	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTGGTGGTCCTTCTT	9115	False	NA	17	True	AATAAA	-20	NA	55834105	55841129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ES.10813.22	chr14	+	3645	16	NIC	ENSMUSG00000002325.16	novel	2959	10	NA	NA	-2498	-1	combination_of_known_splicesites	TRUE	canonical	1	2	junction_7	84.0054495586778	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGTGGTGTCT	NA	False	NA	8	True	NA	NA	NA	55838529	55847486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988_55841701_55841924_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.23	chr14	+	3938	10	NIC	ENSMUSG00000002325.16	novel	2959	10	NA	NA	-923	0	intron_retention	FALSE	canonical	3	25	junction_6	66.0130926033747	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGGTCATGTGGTGT	NA	False	NA	6	True	NA	NA	NA	55840104	55847484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55840157_55840712_55840882_55840988_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.24	chr14	+	1804	1	NIC	ENSMUSG00000002325.16	novel	2959	10	NA	NA	158	-328	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAACCAACCATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	55841185	55842989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55841200_55843000
ES.10813.25	chr14	+	2702	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	-244	1	170	-1	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGTGGTGTCT	NA	False	NA	8	True	NA	NA	NA	55841197	55847486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.26	chr14	+	3179	8	NIC	ENSMUSG00000002325.16	novel	2459	9	NA	NA	185	0	intron_retention	FALSE	canonical	3	21	junction_1	15.4629247174112	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841626	55847487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55845313_55846141_55846258_55846377
ES.10813.27	chr14	+	1976	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	191	292	191	-289	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCGCTCACATGTTGACT	NA	False	NA	NA	False	NA	NA	NA	55841632	55847195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.28	chr14	+	1883	9	FSM	ENSMUSG00000002325.16	ENSMUST00000138037.2	2343	9	-19	479	-17	224	multi-exon	FALSE	canonical	0	0	junction_1	18.7945304543636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCTGGAGAGATGGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	55842016	55847008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55842179_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.29	chr14	+	1817	5	ISM	ENSMUSG00000002325.16	ENSMUST00000138037.2	2343	9	1677	6	436	-3	3prime_fragment	FALSE	canonical	3	25	junction_1	17.4427635425124	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACCTTGGTCATGTGG	NA	False	NA	3	True	NA	NA	NA	55843712	55847481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.3	chr14	+	3400	20	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	-40	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_18	53.5325515179518	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGGCTTCTTGGTGGTCCT	4134	False	NA	13	True	AATAAA	-16	NA	55829124	55841125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832929_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840712_55840882_55840988
ES.10813.30	chr14	+	2721	4	NIC	ENSMUSG00000002325.16	novel	2459	9	NA	NA	442	-1	intron_retention	FALSE	canonical	3	25	junction_1	19.5106808355492	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGTGGTGTCT	NA	False	NA	8	True	NA	NA	NA	55843718	55847486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55843896_55843993_55845313_55846141_55846258_55846377
ES.10813.4	chr14	+	9210	23	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	-36	6336	intron_retention	FALSE	canonical	3	13	junction_15	68.0500544992829	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGTGGTGTCT	4138	False	NA	8	True	NA	NA	NA	55829128	55847486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55829530_55829625_55830074_55830289_55830533_55831751_55831930_55832379_55832759_55832929_55833218_55833463_55833713_55833798_55833985_55834108_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840712_55840882_55840988_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55845313_55846141_55846258_55846377
ES.10813.6	chr14	+	5591	29	Fusion	ENSMUSG00000047098.19_ENSMUSG00000002325.16	novel	3485	21	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_20	66.5756436433822	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	4211	False	NA	9	True	NA	NA	NA	55829201	55847487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840901_55841924_55842011_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ES.10813.7	chr14	+	3778	11	ISM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	45	5300	9	737	5prime_fragment	FALSE	canonical	3	102	junction_6	17.0235131509333	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGTTGCTTTTCTTTA	4219	False	NA	NA	False	AATAAA	-16	NA	55829209	55835850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108
ES.10814.1	chr14	-	856	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	108	-2	-6	2	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTTGTTCATTGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	55828436	55824895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ES.10814.3	chr14	-	1231	10	NIC	ENSMUSG00000079197.11	novel	962	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	941	junction_9	58.5531308795906	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	AATAAA	-20	NA	55828415	55824898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827985_55828298
ES.10814.4	chr14	-	2296	9	ISM	ENSMUSG00000079197.11	ENSMUST00000111378.10	795	11	-608	0	-596	0	intron_retention	FALSE	canonical	3	956	junction_8	57.655767274402	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	AATAAA	-20	NA	55829166	55824898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489
ES.10814.5	chr14	-	783	11	NNC	ENSMUSG00000079197.11	novel	962	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	305.173000116327	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	AATAAA	-20	NA	55828377	55824898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55825023_55825110_55825198_55825496_55825541_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ES.10814.6	chr14	-	1248	9	NIC	ENSMUSG00000079197.11	novel	962	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	915	junction_7	48.2051280985747	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTGTGTTGTTCATTG	NA	False	NA	NA	False	AATAAA	-20	NA	55828422	55824898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826969_55827075_55827553_55827951_55827985_55828298
ES.10814.8	chr14	-	894	10	NIC	ENSMUSG00000079197.11	novel	962	11	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	915	junction_8	46.1979102728711	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTATGTATATTACCT	NA	False	NA	NA	False	AATAAA	-7	NA	55828408	55824911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ES.10815.1	chr14	+	2312	19	ISM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	-34	2	-34	-2	intron_retention	FALSE	canonical	3	23	junction_6	6.67337625323823	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCCTCTTTTTTTTT	1294	False	NA	7	True	ATTAAA	-19	NA	55855459	55862850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529
ES.10815.2	chr14	+	2174	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	9	1	9	-1	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTCTTTTTTTTTT	1337	False	NA	8	True	ATTAAA	-20	NA	55855502	55862851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
ES.10815.3	chr14	+	3070	15	NIC	ENSMUSG00000002324.9	novel	2184	20	NA	NA	90	-5	intron_retention	FALSE	canonical	3	23	junction_3	6.76764511541225	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTTTGCCTCTTTTTT	1418	False	NA	4	True	ATTAAA	-16	NA	55855583	55862847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55855811_55856002_55856116_55856198_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55862244_55862341_55862459_55862529_55862637_55862732
ES.10815.4	chr14	+	2014	20	NNC	ENSMUSG00000002324.9	novel	2184	20	NA	NA	117	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.984753977427	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGACTTTGCCTCTTT	1445	False	NA	1	True	ATTAAA	-13	NA	55855610	55862844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858732_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
ES.10815.5	chr14	+	3870	6	NIC	ENSMUSG00000002324.9	novel	2184	20	NA	NA	2620	-6	intron_retention	FALSE	canonical	3	31	junction_2	5.8172158288996	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACTTTGCCTCTTTTT	3948	False	NA	3	True	ATTAAA	-15	NA	55858113	55862846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55859752_55859883_55860343_55860620_55861092_55861377_55862459_55862529_55862637_55862732
ES.10815.6	chr14	+	313	1	Intergenic	novelGene_9046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAG	4863	False	NA	NA	False	NA	NA	NA	55859028	55859341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55859000_55859300
ES.10816.1	chr14	+	2914	1	FSM	ENSMUSG00000115222.2	ENSMUST00000228007.2	2749	1	-169	4	-169	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTGGTCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	55880891	55883805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55880900_55883800
ES.10817.1	chr14	+	2091	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	-550	452	-256	432	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACGTTCTTCTATACTT	NA	False	NA	25	True	ATTAAA	-26	NA	55909141	55916205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ES.10817.10	chr14	+	1715	8	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	35	425	intron_retention	FALSE	canonical	3	97	junction_1	17.5731706453506	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909749	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55913190_55914211_55914492_55914662_55914706_55915327_55915488_55915680
ES.10817.11	chr14	+	1312	8	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	49	425	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	49.3223466346748	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909763	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55915327_55915488_55915680
ES.10817.12	chr14	+	3743	9	NIC	ENSMUSG00000002326.7	novel	773	7	NA	NA	8	425	intron_retention	FALSE	canonical	3	14	junction_1	41.6561445047426	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909847	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909950_55910162_55910259_55910406_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ES.10817.13	chr14	+	1476	10	NIC	ENSMUSG00000002326.7	novel	773	7	NA	NA	17	424	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGCTTAGACGTTCTT	NA	False	NA	17	True	ATTAAA	-18	NA	55909856	55916197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ES.10817.14	chr14	+	1668	4	ISM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	4756	-444	34	444	3prime_fragment	FALSE	canonical	3	126	junction_1	15.2970585407784	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGGTGGCCCACACC	NA	False	NA	NA	False	ATTAAA	-15	NA	55914447	55917101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_55914492_55914662_55914706_55915327_55915488_55915680
ES.10817.2	chr14	+	2069	10	Fusion	ENSMUSG00000115154.2_ENSMUSG00000002326.7	novel	1993	10	NA	NA	56	8652	multi-exon	FALSE	canonical	1	1	junction_9	41.2903001792054	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGTGTGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	55909453	55925309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55924494
ES.10817.4	chr14	+	2373	7	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	22	425	intron_retention	FALSE	canonical	3	97	junction_1	19.0146142626022	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909736	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55915488_55915680
ES.10817.5	chr14	+	1402	11	NNC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	24	425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	42.0843201204439	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909738	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680_55915880_55915964
ES.10817.6	chr14	+	1745	8	NNC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	31	434	intron_retention	FALSE	canonical	1	4	junction_6	48.0174288085874	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTTCTTCTATACTTGA	NA	False	NA	27	True	ATTAAA	-28	NA	55909745	55916207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914706_55915333_55915488_55915680
ES.10817.7	chr14	+	4621	6	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	31	425	intron_retention	FALSE	canonical	3	97	junction_1	20.819221887477	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909745	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909842_55910162_55910259_55910406_55912868_55913015_55913190_55914211_55915488_55915680
ES.10817.8	chr14	+	1310	3	FSM	ENSMUSG00000002326.7	ENSMUST00000226735.2	1658	3	348	0	31	0	multi-exon	FALSE	canonical	3	97	junction_1	16.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGT	NA	False	NA	NA	False	AATATA	-41	NA	55909745	55911524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55909842_55910162_55910259_55910406
ES.10817.9	chr14	+	1287	8	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	35	425	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	49.6008558188181	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTAGACGTTCTTC	NA	False	NA	18	True	ATTAAA	-19	NA	55909749	55916198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914662_55914706_55915327_55915488_55915680
ES.10818.1	chr14	+	1584	1	Intergenic	novelGene_9049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55935792	55937376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_55935800_55937400
ES.10819.1	chr14	+	3696	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	-2	0	-2	0	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCAGTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	55983147	55992957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.11	chr14	+	2028	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	19	1298	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	217.679569692997	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGATCCAAAAGTCTTA	NA	False	NA	-88	True	NA	NA	NA	55983168	55991313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991100
ES.10819.12	chr14	+	5130	7	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	24	1430	intron_retention	FALSE	canonical	0	0	junction_1	266.518083605764	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTATGTCCATCTGCT	NA	False	NA	44	True	NA	NA	NA	55983173	55991445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55986900_55987486_55987591_55988509_55988703_55989514_55989656_55989993_55990506_55990716_55990823_55991097
ES.10819.13	chr14	+	2281	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	25	-1441	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	218.394139115499	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATATTTTTATTTTATT	NA	False	NA	22	True	NA	NA	NA	55983174	55991516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990663_55990823_55991097
ES.10819.14	chr14	+	2218	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	25	-1445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	220.67964603207	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGAAATATTTTTATTT	NA	False	NA	18	True	NA	NA	NA	55983174	55991512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988515_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.15	chr14	+	1877	1	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	25	-4964	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	448	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATTACTGATGGGAGCA	NA	False	NA	NA	False	TTTAAA	-34	NA	55983174	55985051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983200_55985100
ES.10819.16	chr14	+	2380	9	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	27	-1436	intron_retention	FALSE	canonical	3	658	junction_1	26.9953699733862	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	27	True	NA	NA	NA	55983176	55991521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990506_55990716_55990823_55991097
ES.10819.18	chr14	+	5088	8	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	-1439	intron_retention	FALSE	canonical	3	675	junction_1	17.8199612908716	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	24	True	NA	NA	NA	55983177	55991518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.19	chr14	+	2125	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	28	1541	28	1401	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTCTGTGGCAGCTA	NA	False	NA	15	True	AAAACA	-23	NA	55983177	55991416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.2	chr14	+	2258	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	0	1436	0	-1436	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	27	True	NA	NA	NA	55983149	55991521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.21	chr14	+	1970	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	1430	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	288.767153838179	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTATGTCCATCTGCT	NA	False	NA	44	True	NA	NA	NA	55983177	55991445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990774_55990844_55991244
ES.10819.22	chr14	+	2351	9	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	-1439	intron_retention	FALSE	canonical	0	0	junction_3	232.426567704727	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	24	True	NA	NA	NA	55983177	55991518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987473_55987591_55988509_55988703_55989514_55989656_55989993_55990506_55990716_55990823_55991097
ES.10819.23	chr14	+	2722	7	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	-1444	intron_retention	FALSE	canonical	3	659	junction_1	22.1409625405542	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAAATATTTTTATTTT	NA	False	NA	19	True	NA	NA	NA	55983177	55991513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990823_55991097
ES.10819.24	chr14	+	2370	9	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	-1436	intron_retention	FALSE	canonical	3	659	junction_1	23.4464149711635	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATTTTTTA	NA	False	NA	27	True	NA	NA	NA	55983177	55991521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.25	chr14	+	3701	11	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	28	143	intron_retention	FALSE	canonical	0	0	junction_10	210.768332535986	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATGGTAGCTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	55983177	55993100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097_55992076_55992183
ES.10819.27	chr14	+	3142	9	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	32	-1439	intron_retention	FALSE	canonical	3	658	junction_1	27.7387364528379	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	24	True	NA	NA	NA	55983181	55991518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.29	chr14	+	6266	7	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	37	1636	intron_retention	FALSE	canonical	3	658	junction_1	29.8593927154142	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATCCCCTGTCCATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	55983186	55994593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55987591_55988509_55988703_55989514_55989656_55989993_55990506_55990716
ES.10819.3	chr14	+	1734	9	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	4	1436	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	235.024333846519	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCATCTGCTATTCTC	NA	False	NA	-43	True	NA	NA	NA	55983153	55991451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.33	chr14	+	5456	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	57	-1819	57	1819	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTGAGGCATGCGTCT	NA	False	NA	NA	False	NA	NA	NA	55983206	55994776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.34	chr14	+	2556	8	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	59	-1439	intron_retention	FALSE	canonical	3	658	junction_1	24.3075532058894	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	24	True	NA	NA	NA	55983208	55991518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990823_55991097
ES.10819.35	chr14	+	6626	11	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	62	3513	intron_retention	FALSE	canonical	1	2	junction_10	210.172524369861	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCAGTGGTGGCGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	55983211	55996470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097_55995468_55995986
ES.10819.37	chr14	+	3077	7	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	68	-1458	intron_retention	FALSE	canonical	3	658	junction_1	25.408331966765	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTATTTTTCTTGGA	NA	False	NA	5	True	NA	NA	NA	55983217	55991499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55987591_55988509_55988703_55989514_55989656_55989993_55990823_55991097
ES.10819.38	chr14	+	2006	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	228	-1439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	219.851352699843	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTATTTTATTTT	NA	False	NA	24	True	NA	NA	NA	55983377	55991518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989535_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.5	chr14	+	5321	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	12	-1639	12	1639	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCCTGTCCATGTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	55983161	55994596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.6	chr14	+	5374	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	14	1641	intron_retention	FALSE	canonical	1	2	junction_8	218.394139115499	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTGTCCATGTCTGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	55983163	55994598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990663_55990823_55991097
ES.10819.7	chr14	+	3301	8	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	17	1436	intron_retention	FALSE	canonical	3	658	junction_1	25.668212693079	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCATCTGCTATTCTC	NA	False	NA	-43	True	NA	NA	NA	55983166	55991451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55988703_55989514_55989656_55989993_55990120_55990268_55990823_55991097
ES.10819.8	chr14	+	7197	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	17	-3520	17	3520	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCGCACACCTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	55983166	55996477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.10819.9	chr14	+	3820	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	17	-143	17	143	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATGGTAGCTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	55983166	55993100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ES.1082.1	chr1	-	228	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTAAATTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	93814019	93813791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_93813800_93814000
ES.10820.1	chr14	+	175	1	Intergenic	novelGene_9051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAACAACAAAATC	NA	False	NA	NA	False	NA	NA	NA	56031836	56032011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56031800_56032000
ES.10821.1	chr14	+	191	1	Intergenic	novelGene_9052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTTTGTGCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	56052548	56052739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56052500_56052700
ES.10822.1	chr14	+	235	1	Intergenic	novelGene_9053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCATATACTAAATAGAT	NA	False	NA	NA	False	CATAAA	-17	NA	56058830	56059065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56058800_56059100
ES.10823.1	chr14	+	3897	10	NIC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	31	1	intron_retention	FALSE	canonical	0	0	junction_1	13.7688142885864	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCTCCAGAGCTCTTT	NA	False	NA	19	True	AATAAA	-19	NA	56060631	56071401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56060723_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.10	chr14	+	3860	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_1	13.7688142885864	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	16	True	AATAAA	-16	NA	56062206	56071398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062264_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.11	chr14	+	2402	9	FSM	ENSMUSG00000023411.13	ENSMUST00000172271.9	3775	9	-199	1572	43	114	multi-exon	FALSE	canonical	3	29	junction_5	5.95818764390649	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTCAGAAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	56062294	56069826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.12	chr14	+	5239	7	NIC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	69	-1	intron_retention	FALSE	canonical	3	26	junction_6	7.62488615579858	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCAGGCTCCAGAGCT	NA	False	NA	15	True	AATAAA	-15	NA	56062320	56071397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56062594_56063614_56064711_56066059_56067022_56067350_56069166_56069404_56069532_56069679_56070262_56071013
ES.10823.13	chr14	+	5988	6	NIC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	75	0	intron_retention	FALSE	canonical	3	34	junction_1	4.88262224629348	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062326	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56062594_56063614_56064711_56066059_56067022_56067350_56069166_56069404_56069532_56069679
ES.10823.14	chr14	+	4989	8	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	75	1	intron_retention	FALSE	canonical	0	0	junction_5	19.2481114896596	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	17	True	AATAAA	-17	NA	56062326	56071399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062594_56063614_56064711_56066059_56067022_56067350_56068054_56068182_56068241_56069109_56069166_56069404_56069532_56069679
ES.10823.15	chr14	+	4076	8	ISM	ENSMUSG00000023411.13	ENSMUST00000024179.6	3267	10	91	0	91	0	intron_retention	FALSE	canonical	3	29	junction_5	6.16110247224224	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062342	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404
ES.10823.16	chr14	+	3589	6	NIC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	194	0	intron_retention	FALSE	canonical	3	41	junction_3	2.75680975041804	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	16	True	AATAAA	-16	NA	56064688	56071398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56064711_56066059_56067022_56067350_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.2	chr14	+	3851	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	511	1	intron_retention	FALSE	canonical	0	0	junction_1	13.7688142885864	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGGCTCCAGAGCTCT	NA	False	NA	17	True	AATAAA	-17	NA	56061111	56071399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56061159_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.3	chr14	+	4278	10	FSM	ENSMUSG00000023411.13	ENSMUST00000024179.6	3267	10	-1011	0	640	0	multi-exon	FALSE	canonical	3	26	junction_9	7.13537527022325	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56061240	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
ES.10823.4	chr14	+	4855	9	FSM	ENSMUSG00000023411.13	ENSMUST00000172271.9	3775	9	-1077	-3	816	1	multi-exon	FALSE	canonical	3	29	junction_5	5.95818764390649	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCTCCAGAGCTCTTT	NA	False	NA	19	True	AATAAA	-19	NA	56061416	56071401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.5	chr14	+	4932	8	NIC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-524	0	intron_retention	FALSE	canonical	3	34	junction_1	4.56249126362038	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56061727	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.6	chr14	+	3838	10	NNC	ENSMUSG00000023411.13	novel	3775	9	NA	NA	-187	1	intron_retention	FALSE	canonical	0	0	junction_1	13.7688142885864	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGCTCCAGAGCTCTTT	NA	False	NA	19	True	AATAAA	-19	NA	56062064	56071401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062097_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.7	chr14	+	4319	9	NNC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-187	0	intron_retention	FALSE	canonical	0	0	junction_1	18.7399973319102	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062064	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062097_56062465_56062594_56063614_56064711_56066059_56067022_56067350_56067407_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ES.10823.8	chr14	+	3745	9	NNC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-186	0	intron_retention	FALSE	canonical	0	0	junction_1	18.5388106414624	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062065	56071400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062264_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067407_56069109_56069166_56069404_56069532_56069679
ES.10823.9	chr14	+	3081	11	NNC	ENSMUSG00000023411.13	novel	3267	10	NA	NA	-186	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3731073427233	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCAGGCTCCAGAGCT	NA	False	NA	15	True	AATAAA	-15	NA	56062065	56071397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56062097_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
ES.10824.1	chr14	-	2852	12	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	419	8188	intron_retention	FALSE	canonical	0	0	junction_1	121.43896198339	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATTGGGGGCCCTGGT	NA	False	NA	NA	False	NA	NA	NA	55867248	55854668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55855833_55863062_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205
ES.10824.10	chr14	-	4870	27	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_25	75.2930075255898	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTAGCTTTCTGCACAA	9798	False	NA	78	True	AATAAA	-21	NA	55873088	55863091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.100	chr14	-	2480	6	NNC	ENSMUSG00000002320.16	novel	2517	6	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	159.974497967645	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	4771	False	NA	40	True	AATAAA	-8	NA	55881232	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878203_55879046_55880050_55880413_55881053
ES.10824.101	chr14	-	2264	6	NNC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	165.150113533113	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5198	False	NA	40	True	AATAAA	-8	NA	55880805	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875554_55877841_55878028_55878423_55879046_55880050_55880413_55880586
ES.10824.103	chr14	-	2217	5	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	136.560426185627	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAATATATATATTTGAA	5200	False	NA	-51	True	ATTAAA	-15	NA	55880803	55873523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875590_55877841_55878028_55878423_55879046_55880050
ES.10824.104	chr14	-	2082	6	NNC	ENSMUSG00000002320.16	novel	2148	6	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_1	162.246232621901	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAATATATATATTTGAA	5222	False	NA	-51	True	ATTAAA	-15	NA	55880781	55873523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875651_55877841_55878028_55878423_55879046_55880050_55880413_55880586
ES.10824.105	chr14	-	2440	1	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	332	12	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAGGGTCAAAGTGGA	7818	False	NA	NA	False	AATAAA	-35	NA	55878185	55875745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55875700_55878200
ES.10824.106	chr14	-	4654	2	FSM	ENSMUSG00000002320.16	ENSMUST00000146588.2	760	2	-1749	-2145	6	2	multi-exon	FALSE	canonical	3	352	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATGAGCTATAAAAGGG	5198	False	NA	NA	False	AATAAA	-25	NA	55880805	55875755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55878028_55878423
ES.10824.107	chr14	-	2108	4	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-5	786	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	163.960022227642	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGAACCACTGTCTCTAG	5201	False	NA	NA	False	NA	NA	NA	55880802	55876766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55878028_55878726_55879046_55880050_55880413_55880636
ES.10824.108	chr14	-	156	1	Antisense	novelGene_ENSMUSG00000115222.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	4346	False	NA	NA	False	NA	NA	NA	55881657	55881501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_55881500_55881700
ES.10824.109	chr14	-	174	1	Intergenic	novelGene_9047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8873	False	NA	NA	False	NA	NA	NA	55891377	55891203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55891200_55891400
ES.10824.11	chr14	-	5942	20	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	298	junction_19	34.1348150070843	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACACTAGCTTTCTGCA	9788	False	NA	75	True	AATAAA	-18	NA	55873098	55863094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55865451_55865562_55865689_55866048_55866097_55866250_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872907_55872986
ES.10824.111	chr14	-	1684	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	35	14	-22	1	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGACAATTTTCT	2320	False	NA	-22	True	AATAAA	-15	NA	55897930	55895349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ES.10824.112	chr14	-	1774	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	-43	-1	14	1	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGACAATTTTCT	2299	False	NA	-22	True	AATAAA	-15	NA	55897951	55895349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
ES.10824.113	chr14	-	1597	5	NIC	ENSMUSG00000002329.8	novel	1733	6	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	196.050216781313	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGACAATTTTCT	2346	False	NA	-22	True	AATAAA	-15	NA	55897904	55895349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897794
ES.10824.114	chr14	-	1354	1	NIC	ENSMUSG00000002329.8	novel	1733	6	NA	NA	1182	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGGAAAGACAATTTT	3545	False	NA	-24	True	AATAAA	-13	NA	55896705	55895351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55895400_55896700
ES.10824.115	chr14	-	703	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	40	990	-17	889	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGTTTCCATTTTTC	2325	False	NA	-14	True	ATTAAA	-36	NA	55897925	55896325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ES.10824.116	chr14	-	739	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	16	975	-5	889	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGTTTCCATTTTTC	2358	False	NA	-14	True	ATTAAA	-36	NA	55897892	55896325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
ES.10824.117	chr14	-	848	4	NIC	ENSMUSG00000002329.8	novel	1730	5	NA	NA	6	884	intron_retention	FALSE	canonical	3	428	junction_2	21.4009345590327	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTATGGGTTGTTTCCAT	2369	False	NA	-19	True	ATTAAA	-31	NA	55897881	55896330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55896743_55896826_55896935_55897444_55897686_55897794
ES.10824.118	chr14	-	824	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	3	-3	3	3	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTTCTTCTTGACAC	NA	False	NA	-8	True	AATAAA	-18	NA	55909578	55899716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ES.10824.119	chr14	-	3288	1	NIC	ENSMUSG00000010376.16	novel	824	4	NA	NA	-1254	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55903007	55899719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55899700_55903000
ES.10824.12	chr14	-	3553	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	141.335350608926	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGACACTAGCTTTCTGC	9756	False	NA	74	True	AATAAA	-17	NA	55873130	55863095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865685_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872174_55872257_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.122	chr14	-	557	4	NNC	ENSMUSG00000010376.16	novel	824	4	NA	NA	9	0	intron_retention	FALSE	canonical	1	2	junction_3	881.782034039907	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGACTCTTTCTTCTTG	NA	False	NA	-12	True	AATAAA	-14	NA	55909321	55899720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55900083_55900871_55900955_55901268_55901317_55909257
ES.10824.123	chr14	-	838	4	FSM	ENSMUSG00000010376.16	ENSMUST00000228414.2	516	4	-201	-121	46	0	multi-exon	FALSE	canonical	3	19	junction_3	873.770501269578	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909535	55899721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55900083_55900871_55900955_55901268_55901379_55909251
ES.10824.124	chr14	-	3480	2	ISM	ENSMUSG00000010376.16	ENSMUST00000227157.2	791	3	-2237	-138	-2237	0	intron_retention	FALSE	canonical	3	1846	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55903990	55899721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55900083_55900871
ES.10824.125	chr14	-	1090	3	NIC	ENSMUSG00000010376.16	novel	514	5	NA	NA	46	0	intron_retention	FALSE	canonical	3	1795	junction_2	25.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909535	55899721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55900083_55900871_55901317_55909251
ES.10824.126	chr14	-	7052	3	NNC	ENSMUSG00000010376.16	novel	514	5	NA	NA	1619	0	intron_retention	TRUE	non_canonical	0	0	junction_2	949	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55907711	55899721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55900955_55901268_55905088_55905711
ES.10824.127	chr14	-	4064	1	Intergenic	novelGene_9048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55907078	55903014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55903000_55907100
ES.10824.128	chr14	-	3805	10	NNC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	111.727843938345	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55919242	55912145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55912363_55914655_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.129	chr14	-	5165	3	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	146	410	intron_retention	FALSE	canonical	3	280	junction_2	53	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGTTGTTAGTTTG	NA	False	NA	0	True	AATAAA	-18	NA	55919030	55913664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55918360_55918456
ES.10824.13	chr14	-	4470	30	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	92.2380469910489	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCAGCTGTGACGTCAT	9789	False	NA	-2	True	AATAAA	-26	NA	55873097	55863171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55863813_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.130	chr14	-	4600	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	14	-1658	-2	410	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGTTGTTAGTTTG	NA	False	NA	0	True	AATAAA	-18	NA	55919263	55913664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.131	chr14	-	4451	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	10	410	intron_retention	FALSE	canonical	2	15	junction_5	121.452434629986	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGTTGTTAGTTTG	NA	False	NA	0	True	AATAAA	-18	NA	55919222	55913664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
ES.10824.132	chr14	-	5180	5	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	1	409	intron_retention	FALSE	canonical	3	280	junction_2	15.1554445662277	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTGTTGTTAGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	55919242	55913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.134	chr14	-	4916	6	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-1	407	intron_retention	FALSE	canonical	3	313	junction_4	34.9365138501253	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTTTTTGTTGTTAGT	NA	False	NA	-3	True	AATAAA	-15	NA	55919244	55913667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918547_55918681_55918769_55918846
ES.10824.135	chr14	-	2515	1	NIC	ENSMUSG00000007589.10	novel	2001	9	NA	NA	943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCAAAGGACCTAGATT	NA	False	NA	NA	False	AATAAA	-31	NA	55916589	55914074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55914100_55916600
ES.10824.136	chr14	-	3006	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	13	-63	-3	9	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGTGTGAGTCTCACT	NA	False	NA	NA	False	TATAAA	-17	NA	55919264	55915259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.137	chr14	-	3161	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-29	-2	5	2	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACAGCTTGTGTGAG	NA	False	NA	NA	False	TATAAA	-10	NA	55919272	55915266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.138	chr14	-	3240	7	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-6	2	intron_retention	FALSE	canonical	3	280	junction_4	36.8404970409225	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACAGCTTGTGTGAG	NA	False	NA	NA	False	TATAAA	-10	NA	55919267	55915266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.139	chr14	-	1755	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	-4	1124	intron_retention	FALSE	canonical	3	280	junction_5	41.0435308979555	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAACAGGCTTCTCTT	NA	False	NA	-6	True	AATAAA	-34	NA	55919206	55916539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.140	chr14	-	2009	7	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-29	1124	intron_retention	FALSE	canonical	3	280	junction_4	42.7034346784112	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAACAGGCTTCTCTT	NA	False	NA	-6	True	AATAAA	-34	NA	55919306	55916539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.141	chr14	-	1871	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	-132	1217	-132	1124	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAACAGGCTTCTCTT	NA	False	NA	-6	True	AATAAA	-34	NA	55919409	55916539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.142	chr14	-	1599	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	-3	1105	combination_of_known_junctions	FALSE	canonical	2	15	junction_5	121.452434629986	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919264	55916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
ES.10824.143	chr14	-	2219	6	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	2	1105	intron_retention	FALSE	canonical	3	280	junction_3	45.7934493131933	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919275	55916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917388_55917471_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.145	chr14	-	1647	9	NNC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	0	1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.865156000413	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919243	55916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55916867_55916970_55917024_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.146	chr14	-	1906	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-66	1290	-32	1105	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919309	55916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.148	chr14	-	2012	6	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-1	1105	intron_retention	FALSE	canonical	3	280	junction_3	37.711536696348	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919244	55916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.149	chr14	-	1582	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	0	1104	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	117.416057727403	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTAGGTCATTCCTCCG	NA	False	NA	-26	True	AATAAA	-14	NA	55919232	55916559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.15	chr14	-	4506	25	NIC	ENSMUSG00000002319.17	novel	3824	30	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_23	83.3353228929166	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCAGCTGTGACGTC	9748	False	NA	-4	True	AATAAA	-24	NA	55873138	55863173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.151	chr14	-	2211	6	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	5	1103	intron_retention	FALSE	canonical	3	280	junction_3	36.1386219991853	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919272	55916560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.152	chr14	-	2506	3	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-6	1103	intron_retention	FALSE	canonical	3	280	junction_2	53	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919267	55916560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55918360_55918456
ES.10824.154	chr14	-	2300	5	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-3	1103	intron_retention	FALSE	canonical	3	297	junction_2	34.0174587528228	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919264	55916560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55918165_55918251_55918547_55918681_55918769_55918846
ES.10824.155	chr14	-	2068	7	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	14	1098	intron_retention	FALSE	canonical	3	280	junction_4	44.7167008323885	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTCTGTGTAGGTCATT	NA	False	NA	28	True	AATAAA	-8	NA	55919218	55916565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.156	chr14	-	1949	7	NIC	ENSMUSG00000007589.10	novel	3130	8	NA	NA	-20	1076	intron_retention	FALSE	canonical	3	280	junction_4	36.8404970409225	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGGGAATAAAGACTT	NA	False	NA	6	True	ATTAAA	-27	NA	55919297	55916587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55916867_55916970_55917063_55917322_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ES.10824.157	chr14	-	2882	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	-119	-33	-119	8	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATGGAGTCACATT	277	False	NA	10	True	AATAAA	-33	NA	55951070	55937457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ES.10824.158	chr14	-	2749	15	NNC	ENSMUSG00000022218.17	novel	2730	15	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	57.8384449504455	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTTAGTAGTCCTG	402	False	NA	-22	True	AATAAA	-23	NA	55950945	55937489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946503_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ES.10824.159	chr14	-	3090	14	NIC	ENSMUSG00000022218.17	novel	2852	15	NA	NA	0	-5	intron_retention	FALSE	canonical	3	107	junction_13	37.3956931988496	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGCTGTTTAGTA	398	False	NA	-28	True	AATAAA	-17	NA	55950949	55937495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55937886_55941760_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ES.10824.16	chr14	-	3452	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	98.9389487345323	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCAGCTGTGACGTC	9783	False	NA	-4	True	AATAAA	-24	NA	55873103	55863173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871613_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.161	chr14	-	2928	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	-107	31	-105	-6	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGATGCTGTTTAGT	291	False	NA	-29	True	AATAAA	-16	NA	55951056	55937496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
ES.10824.164	chr14	-	2914	14	NNC	ENSMUSG00000022218.17	novel	2852	15	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_5	70.651406934152	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	401	False	NA	-30	True	AATAAA	-15	NA	55950946	55937497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943924_55943986_55946110_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
ES.10824.166	chr14	-	2726	15	NNC	ENSMUSG00000022218.17	novel	2730	15	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	59.9176305354241	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	402	False	NA	-30	True	AATAAA	-15	NA	55950945	55937497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948053_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ES.10824.167	chr14	-	3353	13	NIC	ENSMUSG00000022218.17	novel	2852	15	NA	NA	509	-7	intron_retention	FALSE	canonical	3	144	junction_11	31.612563430805	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGATGCTGTTTAG	1311	False	NA	-30	True	AATAAA	-15	NA	55950036	55937497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55949747_55949890
ES.10824.169	chr14	-	2740	16	NNC	ENSMUSG00000022218.17	novel	2791	15	NA	NA	53	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	70.1264255153188	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATAAAGATGCTGTTTA	451	False	NA	-31	True	AATAAA	-14	NA	55950896	55937498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950391_55950465_55950843
ES.10824.17	chr14	-	3133	23	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-120	-1	intron_retention	FALSE	canonical	3	313	junction_10	41.4140801305287	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCAGCTGTGACGTC	7123	False	NA	-4	True	AATAAA	-24	NA	55871235	55863173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168
ES.10824.170	chr14	-	2789	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-909	0	0	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTGACCTGCCCAGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	55959714	55952872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.171	chr14	-	2365	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	-18	-461	-18	13	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959738	55953320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.172	chr14	-	2429	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	5	448	5	13	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959654	55953320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.173	chr14	-	4080	1	NIC	ENSMUSG00000040472.16	novel	2882	17	NA	NA	190	13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55957400	55953320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953300_55957400
ES.10824.175	chr14	-	3638	10	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	2	13	intron_retention	FALSE	canonical	3	306	junction_9	94.6284482060048	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959657	55953320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.176	chr14	-	2529	16	NIC	ENSMUSG00000040472.16	novel	2882	17	NA	NA	5	13	intron_retention	FALSE	canonical	3	103	junction_15	119.640275641423	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTCACCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	55959654	55953320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.18	chr14	-	3484	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	76.4571487859417	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCAGCTGTGACGT	9795	False	NA	-5	True	AATAAA	-23	NA	55873091	55863174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872813_55872907_55872986
ES.10824.182	chr14	-	2044	6	NIC	ENSMUSG00000040472.16	novel	2435	15	NA	NA	259	1	intron_retention	FALSE	canonical	3	495	junction_1	15.357083056362	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	55957331	55953332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547
ES.10824.183	chr14	-	2492	15	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	18	1	intron_retention	FALSE	canonical	3	119	junction_14	121.801046374648	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	55959696	55953332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.184	chr14	-	2512	16	FSM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	-19	-1	7	1	multi-exon	FALSE	canonical	3	103	junction_15	120.970777003741	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	55959652	55953332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.185	chr14	-	1425	10	NNC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	244	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	161.162060909332	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	55957346	55953332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956733_55957080_55957164_55957252
ES.10824.19	chr14	-	3568	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_27	77.589801494258	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAAGCAGCTGTGACG	9783	False	NA	-6	True	AATAAA	-22	NA	55873103	55863175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.190	chr14	-	2390	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	23	1	intron_retention	FALSE	canonical	3	119	junction_15	118.381792894384	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAAGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	55959691	55953332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.191	chr14	-	1899	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	6	-19	0	-1	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGCCCTGACAACACT	NA	False	NA	0	True	AATAAA	-38	NA	55959714	55953762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.192	chr14	-	1915	16	NNC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	272	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	139.82649566119	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCTGCCCTGACAAC	NA	False	NA	-3	True	AATAAA	-35	NA	55959361	55953765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957409_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.193	chr14	-	2472	15	NIC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	272	-4	intron_retention	FALSE	canonical	3	306	junction_11	88.9980795481864	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCTGCCCTGACAAC	NA	False	NA	-3	True	AATAAA	-35	NA	55959361	55953765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.195	chr14	-	1990	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	-1	893	-1	-4	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCTGCCCTGACAAC	NA	False	NA	-3	True	AATAAA	-35	NA	55959660	55953765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.196	chr14	-	2352	15	NNC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	12	-5	intron_retention	FALSE	canonical	0	0	junction_10	144.094516175449	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTGCTGCCCTGACAA	NA	False	NA	-4	True	AATAAA	-34	NA	55959702	55953766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957409_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.197	chr14	-	1254	10	NIC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	243	-7	intron_retention	FALSE	canonical	3	454	junction_9	30.7466750184692	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTACTGCTGCCCTGAC	NA	False	NA	-6	True	AATAAA	-32	NA	55957347	55953768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55957164_55957252
ES.10824.198	chr14	-	1828	16	NNC	ENSMUSG00000040472.16	novel	2547	16	NA	NA	272	9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	138.569260660509	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACCATTACTGCTGCCC	NA	False	NA	-10	True	AATAAA	-28	NA	55959361	55953772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55953988_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.2	chr14	-	4738	31	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	8178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.517337964402	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTGCATCAGAATTGG	9795	False	NA	NA	False	NA	NA	NA	55873091	55854678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55855833_55863062_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.20	chr14	-	1371	11	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	797	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	127.345239408468	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAAGCAGCTGTGACG	NA	False	NA	-6	True	AATAAA	-22	NA	55866870	55863175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866609_55866716_55866775_55866850
ES.10824.201	chr14	-	2159	14	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	119	junction_13	123.897934707775	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959712	55953781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.202	chr14	-	2059	16	FSM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	-15	448	-10	0	multi-exon	FALSE	canonical	3	103	junction_15	120.970777003741	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959648	55953781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.203	chr14	-	2271	13	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	119	junction_12	123.217851340173	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959712	55953781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.205	chr14	-	1869	15	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	314	0	intron_retention	FALSE	canonical	3	306	junction_11	90.0166651237425	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959319	55953781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ES.10824.206	chr14	-	2115	13	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	319	0	intron_retention	FALSE	canonical	3	306	junction_10	86.9439075240787	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959314	55953781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051
ES.10824.209	chr14	-	1974	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	0	-3	intron_retention	FALSE	canonical	3	119	junction_15	118.227389193687	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGCTGCCAAGCTACCA	NA	False	NA	-22	True	AATAAA	-16	NA	55959714	55953784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.210	chr14	-	2146	15	FSM	ENSMUSG00000040472.16	ENSMUST00000228899.2	2153	15	-17	24	4	-4	multi-exon	FALSE	canonical	3	103	junction_14	124.625418346175	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGGCTGCCAAGCTACC	NA	False	NA	-23	True	AATAAA	-15	NA	55959655	55953785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.211	chr14	-	2007	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	119	junction_15	116.886953934132	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGGCTGCCAAGCTACC	NA	False	NA	-23	True	AATAAA	-15	NA	55959745	55953785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ES.10824.214	chr14	-	2243	14	NIC	ENSMUSG00000040472.16	novel	2153	15	NA	NA	6	-5	intron_retention	FALSE	canonical	3	103	junction_13	126.82140449882	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGGCTGCCAAGCTAC	NA	False	NA	-24	True	AATAAA	-14	NA	55959653	55953786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956209_55956320_55956410_55956547_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ES.10824.215	chr14	-	155	1	Intergenic	novelGene_9050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	55974674	55974519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_55974500_55974700
ES.10824.216	chr14	-	3495	8	NIC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	27	-2	intron_retention	FALSE	canonical	3	126	junction_6	13.8652406383439	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	55983029	55976478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55980991_55981114_55981259_55982374_55982546_55982897
ES.10824.217	chr14	-	1558	9	NNC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	53.2598289050951	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	55983091	55976478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978470_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ES.10824.218	chr14	-	1461	9	NNC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.7324849586795	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	55983064	55976478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982615_55982897
ES.10824.219	chr14	-	1447	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	28	2	28	-2	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	55983119	55976478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ES.10824.220	chr14	-	1310	9	NNC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.6456836567491	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	55982988	55976478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981253_55982374_55982546_55982897
ES.10824.221	chr14	-	2607	8	NNC	ENSMUSG00000002332.17	novel	2502	8	NA	NA	-40	-4	intron_retention	FALSE	canonical	0	0	junction_7	55.2419538882157	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATGTGAGTTCTCATT	NA	False	NA	-4	True	AATAAA	-16	NA	55983096	55976480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55982615_55982897
ES.10824.222	chr14	-	1520	8	NIC	ENSMUSG00000002332.17	novel	1477	9	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	126	junction_6	16.1813699881647	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATATGTGAGTTCTCAT	NA	False	NA	-5	True	AATAAA	-15	NA	55983064	55976481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ES.10824.223	chr14	-	3452	26	FSM	ENSMUSG00000022220.15	ENSMUST00000002398.9	3444	26	23	-31	2	1	multi-exon	FALSE	canonical	0	0	junction_6	1.03072789813801	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCTTCCTAGGCCTCTC	NA	False	NA	NA	False	NA	NA	NA	56021497	56006512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56006745_56006829_56006955_56007248_56007364_56007481_56007590_56007828_56007976_56008833_56008993_56009411_56009497_56009702_56009888_56010117_56010244_56010878_56011017_56011122_56011208_56011929_56012028_56012425_56012496_56012671_56012759_56012870_56012906_56015384_56015559_56015737_56015871_56016098_56016258_56016391_56016520_56017159_56017272_56017353_56017503_56018276_56018427_56019036_56019199_56019291_56019490_56020976_56021168_56021396
ES.10824.224	chr14	-	2154	9	ISM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	-27	0	-27	0	intron_retention	FALSE	canonical	3	118	junction_2	9.25928587959136	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCTGAGGTGTCAATC	NA	False	NA	-1	True	AATAAA	-20	NA	56026349	56022451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
ES.10824.225	chr14	-	1892	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	-1	1	-1	0	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026323	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ES.10824.226	chr14	-	2483	9	NNC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_2	56.7515142969771	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026276	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56022809_56022939_56023154_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024618_56024738_56024897_56025280_56025591_56025694
ES.10824.227	chr14	-	2493	7	NIC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	118	junction_2	10.0829889748361	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026276	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56022809_56023318_56023377_56023482_56024108_56024213_56024618_56024738_56024897_56025280_56025591_56025694
ES.10824.228	chr14	-	2816	6	NIC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	118	junction_2	7.94984276574072	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026318	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56025591_56025694
ES.10824.229	chr14	-	2075	9	NNC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	-33	0	intron_retention	FALSE	non_canonical	0	0	junction_1	56.9649014745045	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026278	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56022810_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024376_56024572_56024618_56024738_56024897_56025280_56025591_56025694
ES.10824.23	chr14	-	3474	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	99.171010972765	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGGAAGCAGCTGTGAC	9795	False	NA	-7	True	AATAAA	-21	NA	55873091	55863176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867541_55867747_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.230	chr14	-	2307	8	NIC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	-34	0	intron_retention	FALSE	canonical	3	118	junction_2	9.8519655140381	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTGAGGTGTCAAT	NA	False	NA	-2	True	AATAAA	-19	NA	56026279	56022452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56022809_56023318_56023377_56023482_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694
ES.10824.232	chr14	-	1776	11	NNC	ENSMUSG00000022221.15	novel	1892	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.3266661156114	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAGTCTGAGGTGTCA	NA	False	NA	-4	True	AATAAA	-17	NA	56026313	56022454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073_56026192_56026295
ES.10824.233	chr14	-	1644	7	NIC	ENSMUSG00000022221.15	novel	1964	10	NA	NA	198	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	48.6201261481978	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGAGTCTGAGGTGTCA	NA	False	NA	-4	True	AATAAA	-17	NA	56026047	56022454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56025280_56025591_56025694
ES.10824.234	chr14	-	1713	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	46	133	-31	-131	multi-exon	FALSE	canonical	3	118	junction_2	8.73194786861711	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGGACTGGCTAAGACA	NA	False	NA	NA	False	AATAAA	-16	NA	56026276	56022584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ES.10824.235	chr14	-	2298	1	Antisense	novelGene_ENSMUSG00000023411.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTCAATATAAATTCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	56067525	56065227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_56065200_56067500
ES.10824.24	chr14	-	5633	34	Fusion	ENSMUSG00000002319.17_ENSMUSG00000002320.16	novel	3846	30	NA	NA	577	1	multi-exon	FALSE	canonical	0	0	junction_28	93.1115724383749	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	5872	False	NA	-8	True	AATAAA	-20	NA	55880131	55863177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880033
ES.10824.25	chr14	-	4275	29	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	12	1	intron_retention	FALSE	canonical	0	0	junction_3	112.146377333285	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	9757	False	NA	-8	True	AATAAA	-20	NA	55873129	55863177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55863813_55864292_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.26	chr14	-	7823	29	Fusion	ENSMUSG00000002319.17_ENSMUSG00000002320.16	novel	3846	30	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_23	94.0528170655148	837	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGGAAGCAGCTGTGA	5200	False	NA	-8	True	AATAAA	-20	NA	55880803	55863177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986_55874070_55875479_55875590_55877841_55878028_55878423_55879046_55880050
ES.10824.27	chr14	-	3947	27	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_25	78.4947610659011	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9795	False	NA	-9	True	AATAAA	-19	NA	55873091	55863178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.29	chr14	-	3434	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	116.238632727707	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9788	False	NA	-9	True	AATAAA	-19	NA	55873098	55863178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866858_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871613_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.3	chr14	-	3867	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	-18	-3	-18	3	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGAGGCAGGATATG	9727	False	NA	NA	False	AAAAAG	-8	NA	55873159	55862853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.30	chr14	-	3873	28	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_26	98.66453951661	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9777	False	NA	-9	True	AATAAA	-19	NA	55873109	55863178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.32	chr14	-	3523	31	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.44320678947	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9818	False	NA	-9	True	AATAAA	-19	NA	55873068	55863178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55863813_55863925_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871613_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.33	chr14	-	4476	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.958212795755	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGGAAGCAGCTGT	9801	False	NA	-10	True	AATAAA	-18	NA	55873085	55863179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55863813_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866659_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.34	chr14	-	3460	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	99.221356202956	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGGAAGCAGCTGT	9787	False	NA	-10	True	AATAAA	-18	NA	55873099	55863179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870982_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.35	chr14	-	3482	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.0878854192624	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGGAAGCAGCTGT	9780	False	NA	-10	True	AATAAA	-18	NA	55873106	55863179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867319_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.36	chr14	-	5286	25	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_23	78.2009519691985	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAGGAAGCAGCTGT	9753	False	NA	-10	True	AATAAA	-18	NA	55873133	55863179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55867325_55867434_55867547_55867751_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.37	chr14	-	3478	29	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	77.2505448762238	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	9787	False	NA	-11	True	AATAAA	-17	NA	55873099	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872754_55872986
ES.10824.38	chr14	-	3993	31	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.510132655383	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	9752	False	NA	-11	True	AATAAA	-17	NA	55873134	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55863813_55864292_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.39	chr14	-	7260	33	Fusion	ENSMUSG00000002319.17_ENSMUSG00000002320.16	novel	3846	30	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_26	89.5820536488057	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	5201	False	NA	-11	True	AATAAA	-17	NA	55880802	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_55863499_55863610_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ES.10824.4	chr14	-	3792	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAAAGTCCAGTGAGGC	9788	False	NA	NA	False	NA	NA	NA	55873098	55862861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.40	chr14	-	2500	5	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-1015	0	intron_retention	FALSE	canonical	3	360	junction_3	39.1503512117069	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	NA	False	NA	-11	True	AATAAA	-17	NA	55866396	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865689_55866048_55866097_55866250
ES.10824.41	chr14	-	3506	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.7594514509462	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	9755	False	NA	-11	True	AATAAA	-17	NA	55873131	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865445_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.42	chr14	-	4712	28	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_26	74.023983063512	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATAAGGAAGCAGCTG	9788	False	NA	-11	True	AATAAA	-17	NA	55873098	55863180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.44	chr14	-	4581	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_27	74.7942330391747	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTATAAGGAAGCAGC	9800	False	NA	-13	True	AATAAA	-44	NA	55873086	55863182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.45	chr14	-	3899	28	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_26	79.2092088423568	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTATAAGGAAGCAGC	9753	False	NA	-13	True	AATAAA	-44	NA	55873133	55863182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.47	chr14	-	3469	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTGTGACATCATACT	9777	False	NA	-26	True	AATAAA	-31	NA	55873109	55863195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.49	chr14	-	3333	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	100.787232954033	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCTGTGACATCATAC	9788	False	NA	-27	True	AATAAA	-30	NA	55873098	55863196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.5	chr14	-	3857	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-1	-16	intron_retention	FALSE	canonical	0	0	junction_27	77.589801494258	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGCAAAG	9797	False	NA	NA	False	NA	NA	NA	55873089	55862872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.50	chr14	-	5292	25	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	14	-6	intron_retention	FALSE	canonical	0	0	junction_23	80.3989941721219	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGAGCTGTGACA	9812	False	NA	-33	True	AATAAA	-24	NA	55873074	55863202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55867325_55867434_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.52	chr14	-	3459	30	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	96.4677097529027	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGAGCTGTGACA	9799	False	NA	-33	True	AATAAA	-24	NA	55873087	55863202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863694_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.54	chr14	-	3516	13	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-272	-8	intron_retention	FALSE	canonical	3	313	junction_8	39.8882988969057	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAAGCAGAGCTGTGA	9969	False	NA	-35	True	AATAAA	-22	NA	55868389	55863204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273
ES.10824.55	chr14	-	3421	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	20	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.5116469752388	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAAGCAGAGCTGTGA	9818	False	NA	-35	True	AATAAA	-22	NA	55873068	55863204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864898_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.56	chr14	-	4708	28	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-16	-9	intron_retention	FALSE	canonical	0	0	junction_26	75.9899278575948	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAAAGCAGAGCTGTG	9729	False	NA	-36	True	AATAAA	-21	NA	55873157	55863205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.58	chr14	-	4552	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	-11	intron_retention	FALSE	canonical	0	0	junction_27	91.795135703236	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATAATAAAGCAGAGCTG	9788	False	NA	-38	True	AATAAA	-19	NA	55873098	55863207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55863813_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.59	chr14	-	3812	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	-11	intron_retention	FALSE	canonical	0	0	junction_27	77.7668135898493	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATAATAAAGCAGAGCTG	9788	False	NA	-38	True	AATAAA	-19	NA	55873098	55863207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.6	chr14	-	3454	26	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-194054	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	81.6325817305811	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAAAATAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	56067468	55862892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_56067330
ES.10824.60	chr14	-	2898	27	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	119.192127733376	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATAATAAAGCAGAGCTG	9795	False	NA	-38	True	AATAAA	-19	NA	55873091	55863207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865102_55866397_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872455_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.61	chr14	-	4287	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-1	-12	intron_retention	TRUE	canonical	0	0	junction_2	96.4677097529027	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTATAATAAAGCAGAGCT	9797	False	NA	-39	True	AATAAA	-18	NA	55873089	55863208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55864526_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.62	chr14	-	4836	28	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-3	-13	intron_retention	FALSE	canonical	0	0	junction_26	76.0393732389929	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTATAATAAAGCAGAGC	9795	False	NA	-40	True	AATAAA	-17	NA	55873091	55863209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.63	chr14	-	3558	29	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-1	-13	intron_retention	FALSE	canonical	0	0	junction_27	75.9666531970389	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTATAATAAAGCAGAGC	9797	False	NA	-40	True	AATAAA	-17	NA	55873089	55863209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.65	chr14	-	4761	27	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-10	-14	intron_retention	FALSE	canonical	0	0	junction_25	75.2930075255898	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACTATAATAAAGCAGAG	9788	False	NA	-41	True	AATAAA	-16	NA	55873098	55863210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55864902_55864991_55865451_55865562_55865689_55866048_55866097_55866250_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.68	chr14	-	3363	28	ISM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	-5	1716	-5	182	5prime_fragment	FALSE	canonical	0	0	junction_26	72.2164100225372	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCTTCTACTCTTGT	9740	False	NA	NA	False	NA	NA	NA	55873146	55864572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.69	chr14	-	5980	3	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	352	junction_1	8	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5201	False	NA	51	True	AATAAA	-19	NA	55880802	55873421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55878028_55878423_55879046_55880050
ES.10824.7	chr14	-	3643	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	-17	220	-17	14	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAAGGCTAGAGGTATGT	9728	False	NA	93	True	AATAAA	-36	NA	55873158	55863076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.70	chr14	-	2052	6	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	133.851260733696	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCGTTGGAAGTTTT	5200	False	NA	50	True	AATAAA	-18	NA	55880803	55873422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880207_55880636
ES.10824.71	chr14	-	2964	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	-488	-94	-22	-1	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCGTTGGAAGTTTT	4718	False	NA	50	True	AATAAA	-18	NA	55881285	55873422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
ES.10824.72	chr14	-	2318	5	NNC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	136.560426185627	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCGTTGGAAGTTTT	5200	False	NA	50	True	AATAAA	-18	NA	55880803	55873422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875590_55877841_55878028_55878423_55879046_55880050
ES.10824.73	chr14	-	2366	6	NNC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.714682006416	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5190	False	NA	48	True	AATAAA	-16	NA	55880813	55873424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880536
ES.10824.74	chr14	-	4710	4	NIC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	338	junction_1	12.2565175405668	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5222	False	NA	48	True	AATAAA	-16	NA	55880781	55873424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55878028_55878423_55879046_55880050
ES.10824.75	chr14	-	2356	5	NNC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	165.610235190945	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5221	False	NA	48	True	AATAAA	-16	NA	55880782	55873424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875651_55877841_55878028_55878423_55879046_55880050
ES.10824.76	chr14	-	2204	4	NIC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	6	-4	combination_of_known_splicesites	TRUE	canonical	1	6	junction_1	167.004989945411	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTCGTTGGA	5198	False	NA	44	True	AATAAA	-12	NA	55880805	55873428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55877841_55878028_55878423_55879046_55880050
ES.10824.77	chr14	-	2875	4	NIC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	4	-5	intron_retention	FALSE	canonical	3	260	junction_2	45.5192267069642	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGATCCTGTCGTTGG	5196	False	NA	43	True	AATAAA	-11	NA	55880807	55873429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55879046_55880050
ES.10824.78	chr14	-	2075	7	NNC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	152.295400091037	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5201	False	NA	40	True	AATAAA	-8	NA	55880802	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55878505_55878726_55879046_55880050_55880413_55880586
ES.10824.79	chr14	-	2168	6	NNC	ENSMUSG00000002320.16	novel	2148	6	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	130.396318966449	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5198	False	NA	40	True	AATAAA	-8	NA	55880805	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880718
ES.10824.8	chr14	-	3698	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-86	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTGCACAAAGGCTAG	9659	False	NA	85	True	AATAAA	-28	NA	55873227	55863084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.80	chr14	-	2305	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	201	11	-45	-8	multi-exon	FALSE	canonical	2	8	junction_5	133.851260733696	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	4941	False	NA	40	True	AATAAA	-8	NA	55881062	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
ES.10824.81	chr14	-	2112	4	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.85589258066	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5215	False	NA	40	True	AATAAA	-8	NA	55880788	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875651_55878643_55879046_55880050
ES.10824.82	chr14	-	2297	6	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	2	29	junction_5	125.802384715076	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5201	False	NA	40	True	AATAAA	-8	NA	55880802	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880586
ES.10824.83	chr14	-	2244	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	-91	11	-2	-8	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5204	False	NA	40	True	AATAAA	-8	NA	55880799	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ES.10824.84	chr14	-	2541	5	NNC	ENSMUSG00000002320.16	novel	2148	6	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	139.257854356586	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5192	False	NA	40	True	AATAAA	-8	NA	55880811	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875651_55877841_55878028_55878423_55879046_55880050
ES.10824.85	chr14	-	2147	6	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	158.238301305341	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5222	False	NA	40	True	AATAAA	-8	NA	55880781	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875590_55877841_55878028_55878423_55878505_55878643_55879046_55880050
ES.10824.86	chr14	-	3873	3	ISM	ENSMUSG00000002320.16	ENSMUST00000121791.8	2148	6	8	-36	-6	-8	intron_retention	FALSE	canonical	3	260	junction_2	39	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5200	False	NA	40	True	AATAAA	-8	NA	55880803	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_55874070_55875315_55875590_55877841
ES.10824.87	chr14	-	2355	6	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.928594530142	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5178	False	NA	40	True	AATAAA	-8	NA	55880825	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55878505_55878643_55879046_55880050
ES.10824.88	chr14	-	2001	6	NNC	ENSMUSG00000002320.16	novel	2148	6	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	154.004675253708	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5201	False	NA	40	True	AATAAA	-8	NA	55880802	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875479_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880718
ES.10824.89	chr14	-	2088	6	NIC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	135.389216705024	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5204	False	NA	40	True	AATAAA	-8	NA	55880799	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880207_55880586
ES.10824.9	chr14	-	5607	23	NIC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	-15	5	intron_retention	FALSE	canonical	0	0	junction_21	82.4273283736038	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTCTGCACAAAGGCTA	9783	False	NA	84	True	AATAAA	-27	NA	55873103	55863085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55863499_55863610_55865125_55865241_55865451_55865562_55865689_55866048_55866445_55866523_55866633_55866716_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ES.10824.90	chr14	-	2276	6	NIC	ENSMUSG00000002320.16	novel	2517	6	NA	NA	15	-8	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	134.620057940858	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	4755	False	NA	40	True	AATAAA	-8	NA	55881248	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55881053
ES.10824.92	chr14	-	1998	6	NNC	ENSMUSG00000002320.16	novel	2148	6	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	135.773929750891	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5162	False	NA	40	True	AATAAA	-8	NA	55880841	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880207_55880718
ES.10824.93	chr14	-	1738	6	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	-5	-8	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	156.867332481942	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5201	False	NA	40	True	AATAAA	-8	NA	55880802	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878726_55879046_55880050_55880207_55880636
ES.10824.94	chr14	-	5098	3	NIC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	338	junction_1	15	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5222	False	NA	40	True	AATAAA	-8	NA	55880781	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_55874070_55875315_55879046_55880050
ES.10824.95	chr14	-	2249	6	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	136.543619404204	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5201	False	NA	40	True	AATAAA	-8	NA	55880802	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55878505_55878726_55879046_55880050
ES.10824.97	chr14	-	2469	5	NNC	ENSMUSG00000002320.16	novel	2382	5	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	138.176517541875	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5220	False	NA	40	True	AATAAA	-8	NA	55880783	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880033
ES.10824.98	chr14	-	2448	4	NNC	ENSMUSG00000002320.16	novel	2089	6	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.85589258066	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5196	False	NA	40	True	AATAAA	-8	NA	55880807	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875528_55878203_55879046_55880050
ES.10824.99	chr14	-	2161	6	NNC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	53	-8	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	158.11691876583	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGATCCTGTCGT	5348	False	NA	40	True	AATAAA	-8	NA	55880655	55873432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_55874070_55875315_55875651_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ES.10825.1	chr14	+	227	1	Intergenic	novelGene_9054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTGGCTTCATCAGA	NA	False	NA	NA	False	NA	NA	NA	56074250	56074477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56074200_56074500
ES.10826.1	chr14	+	7415	9	NIC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.7182254533038	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091434	56112193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56091534_56091668_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.10	chr14	+	4858	3	NIC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	153	4553	intron_retention	FALSE	canonical	3	80	junction_1	7	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	56091645	56105150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56091884_56100409_56103547_56103667
ES.10826.11	chr14	+	7142	8	NNC	ENSMUSG00000075592.11	novel	470	3	NA	NA	7958	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8372610655291	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	56099450	56112192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56099493_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.12	chr14	+	3595	7	ISM	ENSMUSG00000075592.11	ENSMUST00000100529.10	6990	9	8911	3067	8911	-3067	3prime_fragment	FALSE	canonical	3	84	junction_4	6.66874967458085	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATGAGTTGTGTGCTGGC	NA	False	NA	2	True	NA	NA	NA	56100403	56108681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.13	chr14	+	6523	8	NNC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	9395	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.8372610655291	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGTTTAATTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	56100887	56112192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584_56110001_56110099
ES.10826.14	chr14	+	4804	3	NNC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	14454	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAATGTTTAATTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	56105946	56112191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56105973_56107256_56107428_56107584
ES.10826.15	chr14	+	3068	1	ISM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	16335	1317	16316	-872	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTACATTCTGCATCTGGC	NA	False	NA	NA	False	NA	NA	NA	56107808	56110876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56107800_56110900
ES.10826.2	chr14	+	7497	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	14	0	-5	0	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091487	56112193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.3	chr14	+	4008	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	38	3465	19	-3020	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCAGTCTCCCTTGC	NA	False	NA	49	True	NA	NA	NA	56091511	56108728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.4	chr14	+	3939	8	NNC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	86	-3015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.2844500384584	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTCCCTTGCCTTTT	NA	False	NA	54	True	NA	NA	NA	56091578	56108733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103540_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.5	chr14	+	5205	4	NNC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	96	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.9444048184931	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAATGTTTAATTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	56091588	56112191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56091884_56100409_56101069_56101189_56101391_56108141
ES.10826.6	chr14	+	7309	8	NNC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8372610655291	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091591	56112193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56091800_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ES.10826.7	chr14	+	4790	4	NIC	ENSMUSG00000075592.11	novel	7511	8	NA	NA	100	4553	intron_retention	FALSE	canonical	3	80	junction_1	5.79271573232759	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	56091592	56105150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56091884_56100409_56101069_56101189_56103547_56103667
ES.10826.8	chr14	+	3546	7	ISM	ENSMUSG00000075592.11	ENSMUST00000100529.10	6990	9	127	4986	127	-4986	internal_fragment	FALSE	canonical	3	80	junction_1	7.56453714527348	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGGTCTTAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	56091619	56106762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870
ES.10826.9	chr14	+	4053	4	ISM	ENSMUSG00000075592.11	ENSMUST00000100529.10	6990	9	141	6590	141	4561	intron_retention	FALSE	canonical	3	80	junction_1	4.08248290463863	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAAGAAATTACCCA	NA	False	NA	NA	False	NA	NA	NA	56091633	56105158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415
ES.10827.1	chr14	+	6278	8	NNC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	-8	4	intron_retention	FALSE	canonical	0	0	junction_7	28.3397751780577	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGCTACTACTCATTT	NA	False	NA	10	True	NA	NA	NA	56122395	56136236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319_56134857_56134982
ES.10827.10	chr14	+	3723	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	30	145	3	-145	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTCTTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	56122433	56134093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.11	chr14	+	3908	8	NNC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	3	-146	intron_retention	FALSE	canonical	2	3	junction_6	37.3860172486223	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCAGTGTCTTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	56122433	56134092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123636_56123687_56123948_56125076_56125170_56125475_56131448_56131617_56131743_56131846_56132319
ES.10827.12	chr14	+	3486	8	FSM	ENSMUSG00000047153.5	ENSMUST00000228462.2	5882	8	-39	2435	4	-95	multi-exon	FALSE	canonical	2	3	junction_6	26.9996220684056	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTTTGAACTCTGTC	NA	False	NA	NA	False	NA	NA	NA	56122434	56133797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131617_56131743_56131846_56132319
ES.10827.13	chr14	+	3605	8	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	4	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.3397751780577	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGATTGTGTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	56122434	56133856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123828_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.14	chr14	+	4038	7	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	12	-35	intron_retention	FALSE	canonical	2	3	junction_5	29.1299769233612	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATTGTGTTAAGCAG	NA	False	NA	NA	False	NA	NA	NA	56122442	56133857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131617_56131743_56131846_56132319
ES.10827.15	chr14	+	3847	7	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	15	-145	intron_retention	FALSE	canonical	2	3	junction_5	28.4175219812628	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTCTTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	56122445	56134093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125475_56131448_56131617_56131743_56131846_56132319
ES.10827.16	chr14	+	3854	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	42	2	15	-2	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGATTGGTGTCTTCTCT	NA	False	NA	NA	False	GGGGCT	-21	NA	56122445	56134236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.17	chr14	+	3681	7	NNC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	18	-324	intron_retention	FALSE	canonical	0	0	junction_2	29.8872882677569	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACCAAACTCACGATGT	NA	False	NA	NA	False	NA	NA	NA	56122448	56133568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56125074_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.18	chr14	+	3494	10	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	21	3	intron_retention	FALSE	canonical	0	0	junction_8	31.6091094855444	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGCTACTACTCATT	NA	False	NA	9	True	NA	NA	NA	56122451	56136235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319_56132475_56134285_56134441_56134982
ES.10827.19	chr14	+	3400	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	48	450	21	-104	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTGTATCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	56122451	56133788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.2	chr14	+	5915	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	-8	-2009	-8	15	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTTAATTGTTTGC	NA	False	NA	21	True	NA	NA	NA	56122395	56136247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.20	chr14	+	5833	8	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_7	28.39445188693	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGGTGGCTACTAC	NA	False	NA	4	True	NA	NA	NA	56122453	56136230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132326
ES.10827.22	chr14	+	6946	5	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	2	3	junction_4	34.7562943939655	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATGGTGGCTACTACT	NA	False	NA	5	True	NA	NA	NA	56122458	56136231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56125076_56125170_56125475_56131448_56131617_56131743
ES.10827.23	chr14	+	5319	9	NNC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	26.5609558374694	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGGTGGCTACTACTC	NA	False	NA	6	True	NA	NA	NA	56122549	56136232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319_56135212_56135638
ES.10827.24	chr14	+	6225	7	NNC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	88	-2	intron_retention	FALSE	canonical	1	1	junction_3	29.7040962382856	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGGTGGCTACTAC	NA	False	NA	4	True	NA	NA	NA	56122561	56136230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56125076_56125170_56125295_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.25	chr14	+	4868	5	NIC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	2177	-3	intron_retention	FALSE	canonical	3	67	junction_4	7.26291952316697	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTATGGTGGCTACTA	NA	False	NA	3	True	NA	NA	NA	56124650	56136229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.3	chr14	+	5617	11	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_7	37.9406114869015	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGGTGGCTACTAC	NA	False	NA	4	True	NA	NA	NA	56122406	56136230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123636_56123687_56123948_56125076_56125170_56125302_56125377_56125475_56126005_56126056_56131448_56131557_56131743_56131846_56132319_56135770_56136139
ES.10827.4	chr14	+	6392	7	NIC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	3	3	intron_retention	FALSE	canonical	3	67	junction_6	6.15539510420646	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGCTACTACTCATT	NA	False	NA	9	True	NA	NA	NA	56122406	56136235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.5	chr14	+	5939	9	NIC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	8	5	intron_retention	FALSE	canonical	0	0	junction_6	32.8433783280588	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTACTACTCATTTT	NA	False	NA	11	True	NA	NA	NA	56122411	56136237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56126005_56126056_56131448_56131557_56131743_56131846_56132319
ES.10827.6	chr14	+	3547	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	10	341	10	5	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTTCTCTGTGACTT	NA	False	NA	NA	False	NA	NA	NA	56122413	56133897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ES.10827.7	chr14	+	3702	7	NIC	ENSMUSG00000047153.5	novel	5882	8	NA	NA	-7	-390	intron_retention	FALSE	canonical	2	3	junction_5	29.1299769233612	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCAAGTGTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	56122423	56133502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131617_56131743_56131846_56132319
ES.10827.8	chr14	+	5708	9	NNC	ENSMUSG00000047153.5	novel	3898	8	NA	NA	2	3	intron_retention	FALSE	non_canonical	0	0	junction_8	26.5609558374694	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGCTACTACTCATT	NA	False	NA	9	True	NA	NA	NA	56122432	56136235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319_56134308_56134465
ES.10827.9	chr14	+	5927	8	FSM	ENSMUSG00000047153.5	ENSMUST00000228462.2	5882	8	-40	-5	3	5	multi-exon	FALSE	canonical	2	3	junction_6	26.9996220684056	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTACTACTCATTTT	NA	False	NA	11	True	NA	NA	NA	56122433	56136237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131617_56131743_56131846_56132319
ES.10828.1	chr14	-	456	3	Antisense	novelGene_ENSMUSG00000068289.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTTTAGGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	56199366	56073205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_56073459_56139221_56139377_56199318
ES.10828.10	chr14	-	1267	5	NIC	ENSMUSG00000022223.10	novel	792	6	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	92.1479788166838	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	False	NA	-9	True	AATAAA	-17	NA	56137650	56134742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270_56137378_56137483
ES.10828.11	chr14	-	2417	2	ISM	ENSMUSG00000022223.10	ENSMUST00000226746.2	501	3	1	-1648	-1	-3	intron_retention	FALSE	canonical	3	17	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	False	NA	-9	True	AATAAA	-17	NA	56137667	56134742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_56136763_56137270
ES.10828.12	chr14	-	1518	4	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	98	junction_3	38.7556447501522	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	False	NA	-9	True	AATAAA	-17	NA	56137667	56134742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56135844_56136640_56136763_56137103_56137378_56137646
ES.10828.13	chr14	-	2585	1	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	-16	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137328	56134743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56134700_56137300
ES.10828.14	chr14	-	2269	4	NIC	ENSMUSG00000022223.10	novel	909	5	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	161	junction_2	15.7550697307953	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137667	56134743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56135470_56135699_56136763_56137103_56137187_56137270
ES.10828.16	chr14	-	1367	6	FSM	ENSMUSG00000022223.10	ENSMUST00000227163.2	792	6	-27	-548	0	-4	multi-exon	FALSE	canonical	2	4	junction_5	71.6753793153549	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137668	56134743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137483
ES.10828.17	chr14	-	1295	6	FSM	ENSMUSG00000022223.10	ENSMUST00000227032.2	1023	6	0	-272	0	-4	multi-exon	FALSE	canonical	3	22	junction_2	63.0441115410472	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137668	56134743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56135470_56135699_56135935_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ES.10828.18	chr14	-	2316	4	FSM	ENSMUSG00000022223.10	ENSMUST00000228151.2	385	4	-84	-1847	-3	-4	multi-exon	FALSE	canonical	3	98	junction_3	32.0312347560939	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCACTGGCTTCCGCTG	NA	False	NA	-10	True	AATAAA	-16	NA	56137753	56134743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56136763_56137103_56137187_56137270_56137378_56137646
ES.10828.19	chr14	-	2145	3	FSM	ENSMUSG00000022223.10	ENSMUST00000226746.2	501	3	1	-1645	-1	-6	multi-exon	FALSE	canonical	3	17	junction_1	40.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATCACTGGCTTCCGC	NA	False	NA	-12	True	AATAAA	-14	NA	56137667	56134745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56136763_56137270_56137378_56137646
ES.10828.2	chr14	-	6131	7	Antisense	novelGene_ENSMUSG00000075592.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTCACGGGTCCCA	9751	False	NA	NA	False	NA	NA	NA	56110874	56091657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_56091882_56100407_56101068_56101188_56102591_56103413_56103762_56105474_56105579_56105869_56105971_56107582
ES.10828.20	chr14	-	175	1	Intergenic	novelGene_9055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56199369	56199194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56199200_56199400
ES.10828.3	chr14	-	4473	2	ISM	ENSMUSG00000040380.15	ENSMUST00000063871.13	4866	3	-853	1571	-853	-1571	intron_retention	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGCTCTTTATTTATTT	9890	False	NA	NA	False	AATAAA	-31	NA	56122702	56117940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_56120635_56120923
ES.10828.4	chr14	-	3332	3	FSM	ENSMUSG00000040380.15	ENSMUST00000063871.13	4866	3	-52	1586	-52	1562	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCGGGAGGTACACGAT	NA	False	NA	NA	False	AATAAA	-16	NA	56121901	56117955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56120635_56120923_56121044_56121368
ES.10828.6	chr14	-	1250	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	4	1	4	-1	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTTCCGCTGTCT	NA	False	NA	-7	True	AATAAA	-19	NA	56137711	56134740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ES.10828.7	chr14	-	1124	5	NNC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.617538414417	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTTCCGCTGTCT	NA	False	NA	-7	True	AATAAA	-19	NA	56137660	56134740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137262_56137378_56137646
ES.10828.8	chr14	-	1919	4	NIC	ENSMUSG00000022223.10	novel	1023	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	17	junction_2	74.028523031479	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	False	NA	-9	True	AATAAA	-17	NA	56137668	56134742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56135470_56135699_56136763_56137270_56137378_56137646
ES.10828.9	chr14	-	1302	5	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	4	-3	intron_retention	FALSE	canonical	3	98	junction_4	39.4778418863038	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	False	NA	-9	True	AATAAA	-17	NA	56137681	56134742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137378_56137646
ES.10829.1	chr14	-	955	5	NNC	ENSMUSG00000040314.3	novel	1002	5	NA	NA	94	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAATGTGTTTGAACT	NA	False	NA	NA	False	ATTAAA	-14	NA	56339937	56337345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56337608_56337999_56338255_56338375_56338567_56339053_56339202_56339838
ES.1083.1	chr1	+	2302	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTTTGTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	93850369	93852671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_93850400_93852700
ES.10830.1	chr14	+	4207	26	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-66218	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.04890108547986	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTCATTGTGGCAT	NA	False	NA	6	True	AGTAAA	-15	NA	56536306	56626008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56536398_56538712_56538850_56544557_56544619_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ES.10830.2	chr14	+	4087	24	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-407	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.08174698202945	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAAGTGTCATTGTGGC	NA	False	NA	4	True	AGTAAA	-13	NA	56602117	56626006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56602289_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ES.10830.3	chr14	+	4069	24	NNC	ENSMUSG00000022229.4	novel	3950	23	NA	NA	-254	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5956194011477	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTGTGGCATTATAA	NA	False	NA	11	True	AGTAAA	-20	NA	56602270	56626013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56602417_56602557_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ES.10830.4	chr14	+	4089	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	-138	-1	-138	1	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTCATTGTGGCAT	NA	False	NA	6	True	AGTAAA	-15	NA	56602386	56626008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ES.10830.5	chr14	+	3728	22	ISM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	880	1	880	-1	3prime_fragment	FALSE	canonical	2	6	junction_17	2.56171002977386	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAAGTGTCATTGTGGC	NA	False	NA	4	True	AGTAAA	-13	NA	56603404	56626006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ES.10830.6	chr14	+	157	1	Intergenic	novelGene_9056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	56620719	56620876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56620700_56620900
ES.10831.1	chr14	+	3579	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	56	13	combination_of_known_junctions	TRUE	canonical	3	349	junction_12	57.9852946875326	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	21	True	ATTAAA	-29	NA	56640093	56726905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.10	chr14	+	5176	37	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	214.004146434965	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640118	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761775_56761869_56762269
ES.10831.100	chr14	+	6127	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	1	461	intron_retention	FALSE	canonical	3	35	junction_1	107.474124792901	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAACAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56640154	56727353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.101	chr14	+	3410	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	112.713377890806	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640155	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.102	chr14	+	2654	10	ISM	ENSMUSG00000000365.10	ENSMUST00000223627.2	2077	14	21820	2	21817	-2	intron_retention	FALSE	canonical	3	349	junction_9	55.669882364427	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATTTTAGAGTCAATTT	NA	False	NA	NA	False	AATAAA	-36	NA	56661973	56700887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337
ES.10831.103	chr14	+	3641	21	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-22631	743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	158.245150004668	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGCACATTTG	NA	False	NA	NA	False	NA	NA	NA	56665398	56725266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56673820_56673902_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.104	chr14	+	4361	30	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-19010	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	223.871502127722	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATTTTAGTTCATGTT	724	False	NA	11	True	AATAAA	-12	NA	56669019	56762483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720676_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.105	chr14	+	2793	20	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-18988	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_9	123.110247193274	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	746	False	NA	8	True	ATTAAA	-16	NA	56669041	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705127_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.106	chr14	+	3322	18	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-16255	719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	131.261512923958	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3479	False	NA	NA	False	NA	NA	NA	56671774	56725242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720818_56720940_56722610_56722702_56724418
ES.10831.107	chr14	+	2499	17	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-11907	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	131.707476534174	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCTATTGGTTTCCT	1498	False	NA	3	True	ATTAAA	-11	NA	56676122	56726887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720924_56722610_56722702_56724418_56724535_56726767
ES.10831.108	chr14	+	2062	15	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	9494	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	143.956200821993	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56697523	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712878_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.109	chr14	+	3522	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	9514	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	221.566859579426	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGTTATTAAGATTC	NA	False	NA	21	True	AATAAA	-22	NA	56697543	56762493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56761762_56761863_56762269
ES.10831.11	chr14	+	4579	32	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-31	-12486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	198.823098129055	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCATGTATGTATGTG	NA	False	NA	NA	False	NA	NA	NA	56640122	56750003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705260_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667
ES.10831.110	chr14	+	1481	11	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-14513	1	combination_of_known_junctions	FALSE	canonical	3	417	junction_10	68.0687887361014	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56705119	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.111	chr14	+	4991	3	NIC	ENSMUSG00000000365.10	novel	621	6	NA	NA	-1118	1	intron_retention	FALSE	canonical	3	515	junction_2	27	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56718514	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56720940_56722610_56722702_56724418
ES.10831.112	chr14	+	1344	1	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	4266	719	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56723898	56725242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56723900_56725200
ES.10831.113	chr14	+	5856	11	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	6714	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	21.0211797956252	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56726346	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56759830_56760021_56761762_56761863_56762269
ES.10831.114	chr14	+	3359	1	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	8779	4878	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAGCCAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	56728411	56731770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56728400_56731800
ES.10831.115	chr14	+	3037	11	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	9500	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	21.6388539437744	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56729132	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.116	chr14	+	2181	12	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	10522	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.7312595846693	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56730154	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760018_56761762_56761863_56762269
ES.10831.117	chr14	+	4867	1	Intergenic	novelGene_9057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	56732668	56737535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56732700_56737500
ES.10831.118	chr14	+	835	3	ISM	ENSMUSG00000000365.10	ENSMUST00000225737.2	680	5	12763	3	12763	-3	3prime_fragment	FALSE	canonical	3	63	junction_2	1	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56759502	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56760021_56761762_56761863_56762269
ES.10831.12	chr14	+	3425	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	115.170043365837	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640123	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.15	chr14	+	4154	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	86	37212	-30	754	5prime_fragment	FALSE	canonical	3	349	junction_12	56.9559862964377	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTGTTTTGTGAACA	NA	False	NA	NA	False	NA	NA	NA	56640123	56725277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.18	chr14	+	4482	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-29	0	intron_retention	FALSE	canonical	2	15	junction_14	112.546533585989	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640124	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56700650_56703083_56703275_56705127_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.2	chr14	+	3524	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-38	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	108.5905631259	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGGTTTCCTTTTTTTT	NA	False	NA	10	True	ATTAAA	-18	NA	56640115	56726894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724513_56726767
ES.10831.20	chr14	+	6148	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-29	1	intron_retention	FALSE	canonical	0	0	junction_17	168.404521436441	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640124	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56711424_56711628_56712103_56712280_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.21	chr14	+	5110	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	112.860437709589	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640126	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56714547_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.22	chr14	+	4932	35	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	218.501353990088	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTTAGTTCATGTTAT	NA	False	NA	13	True	AATAAA	-14	NA	56640127	56762485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.23	chr14	+	4030	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	752	combination_of_known_splicesites	FALSE	canonical	2	7	junction_19	112.132617946615	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACATTTGTTTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	56640127	56725275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.25	chr14	+	4955	35	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_28	217.777037897236	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640127	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.26	chr14	+	4682	34	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	201.022103595769	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCATGTTATTAAGATT	NA	False	NA	20	True	AATAAA	-21	NA	56640127	56762492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56761762_56761863_56762269
ES.10831.27	chr14	+	5051	36	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_27	209.148079560089	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640127	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.28	chr14	+	3149	23	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-26	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	149.32299701659	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGGTTTCCTTTTT	NA	False	NA	7	True	ATTAAA	-15	NA	56640127	56726891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56722610_56722702_56724418_56724535_56726767
ES.10831.29	chr14	+	4235	32	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-24	-8553	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	193.219974062443	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGTTGATTAAGG	NA	False	NA	NA	False	AATAAA	-12	NA	56640129	56753936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724513_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56749667_56749785_56751492_56751662_56753792
ES.10831.3	chr14	+	5189	37	FSM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	79	-4	-37	4	multi-exon	FALSE	canonical	3	48	junction_25	208.622769314721	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGTTATTAAGATTC	NA	False	NA	21	True	AATAAA	-22	NA	56640116	56762493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.31	chr14	+	2725	10	NNC	ENSMUSG00000000365.10	novel	1609	11	NA	NA	-18	-1455	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	150.871378463598	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGGAAACAATATGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	56640135	56677915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060
ES.10831.32	chr14	+	3509	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	109.965085368039	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTTTTCTATTGGTT	NA	False	NA	-1	True	ATTAAA	-7	NA	56640135	56726883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699343_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.33	chr14	+	4064	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-18	748	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	114.719317201291	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640135	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.35	chr14	+	3649	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	143.018908833845	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGGTTTCCTTTTT	NA	False	NA	7	True	ATTAAA	-15	NA	56640135	56726891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56725082_56725209_56726767
ES.10831.36	chr14	+	3807	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	142.232022501447	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640136	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56657766_56658050_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.38	chr14	+	998	10	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-20	3253	-17	-3253	5prime_fragment	FALSE	canonical	3	453	junction_4	32.6602412425979	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACTCTGTTGTGATG	NA	False	NA	NA	False	AAGAAA	-41	NA	56640136	56676117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060
ES.10831.39	chr14	+	3359	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.402674865572	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTTTCCTTTTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	56640136	56726895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.4	chr14	+	1647	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-39	1	-36	-1	multi-exon	FALSE	canonical	3	453	junction_4	33.16700167335	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCCTCCTGCCTCTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	56640117	56679369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
ES.10831.43	chr14	+	5088	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	748	intron_retention	FALSE	canonical	3	349	junction_12	58.1597760167093	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640136	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.44	chr14	+	4388	33	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	198.668654736977	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTATTAAGATTCT	NA	False	NA	22	True	AATAAA	-23	NA	56640136	56762494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56761762_56761863_56762269
ES.10831.45	chr14	+	3602	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	143.503133792555	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640136	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712521_56712600_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.46	chr14	+	3619	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	142.28012206944	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTTTCCTTTTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	56640136	56726895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726026_56726120_56726767
ES.10831.47	chr14	+	422	3	NNC	ENSMUSG00000000365.10	novel	1609	11	NA	NA	-17	-31450	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	14	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTGGATCCCATTGT	NA	False	NA	NA	False	AATACA	-29	NA	56640136	56647920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56647666
ES.10831.48	chr14	+	3439	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	140.557461559321	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640136	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678999_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.50	chr14	+	5781	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	3	intron_retention	TRUE	canonical	1	1	junction_16	114.407410404901	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTTTCCTTTTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	56640136	56726895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708725_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.51	chr14	+	4922	35	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	209.028104019283	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640136	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.52	chr14	+	4672	34	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	99	8544	-17	-8544	5prime_fragment	FALSE	canonical	3	48	junction_25	197.550932628912	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTAAGGTGTTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	56640136	56753945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792
ES.10831.53	chr14	+	3526	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	99	37827	-17	139	5prime_fragment	FALSE	canonical	3	349	junction_12	56.9559862964377	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCACCTCAGAAATAGAG	NA	False	NA	NA	False	NA	NA	NA	56640136	56724662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.54	chr14	+	5093	37	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	212.179145933656	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640136	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.56	chr14	+	5107	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	111.461462398445	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640137	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56726120_56726767
ES.10831.57	chr14	+	3432	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	112.817699556999	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640138	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.58	chr14	+	4834	35	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	205.209330628904	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640138	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56761762_56761863_56762269
ES.10831.61	chr14	+	4586	34	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-12	-8553	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	203.649584707897	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGTTGATTAAGG	NA	False	NA	NA	False	AATAAA	-12	NA	56640141	56753936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792
ES.10831.62	chr14	+	3395	25	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	104	37953	-12	13	5prime_fragment	FALSE	canonical	3	349	junction_12	56.9559862964377	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTTTGAGATAACTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	56640141	56724536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.63	chr14	+	3511	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.844842150627	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640141	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663063_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.64	chr14	+	5320	23	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-11	1	intron_retention	FALSE	canonical	1	2	junction_12	147.445689679145	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640142	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.65	chr14	+	3957	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	719	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	116.902945543509	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56640143	56725242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.66	chr14	+	1273	10	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-13	2971	-10	-2971	5prime_fragment	FALSE	canonical	3	453	junction_4	32.6602412425979	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAATGTTCATGTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	56640143	56676399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060
ES.10831.67	chr14	+	3889	23	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	754	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	147.92312192487	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTGTTTTGTGAACA	NA	False	NA	NA	False	NA	NA	NA	56640143	56725277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.68	chr14	+	3248	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_21	111.484924849995	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGGTTTCCTTTTTTTT	NA	False	NA	10	True	ATTAAA	-18	NA	56640143	56726894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56722610_56722702_56724418_56724535_56726767
ES.10831.7	chr14	+	3470	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	105.930165675316	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640118	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.70	chr14	+	2902	21	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	106	42850	-10	-4884	5prime_fragment	FALSE	canonical	3	349	junction_12	54.252188895933	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTTAATAGGTATACTA	NA	False	NA	NA	False	NA	NA	NA	56640143	56719639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423
ES.10831.71	chr14	+	5057	23	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	-508	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.749902131321	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAGTCAATATTTATAG	NA	False	NA	NA	False	AAAACA	-6	NA	56640143	56726384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.72	chr14	+	3892	23	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	748	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	115.881173108455	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640143	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.73	chr14	+	4016	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-10	748	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	116.970162450053	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640143	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.74	chr14	+	5083	37	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	216.094734812258	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640144	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712925_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.75	chr14	+	4243	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-8	748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	114.39487532228	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640145	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679195_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.76	chr14	+	3866	23	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-8	718	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	151.317246508483	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56640145	56725241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.77	chr14	+	4036	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-8	748	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	114.545192540829	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640145	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.79	chr14	+	4875	35	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	218.485256009246	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640147	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.8	chr14	+	3798	23	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-35	752	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	115.984120101428	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACATTTGTTTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	56640118	56725275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.80	chr14	+	3530	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	111.301392623812	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640147	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722592_56722702_56724418_56724535_56726767
ES.10831.81	chr14	+	3405	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	114.957208222113	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640147	56726892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712982_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.82	chr14	+	4543	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-6	1	intron_retention	FALSE	canonical	3	349	junction_11	58.5564631360194	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGGTTTCCTTTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	56640147	56726893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.83	chr14	+	5147	35	ISM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	110	2156	-6	-2156	5prime_fragment	FALSE	canonical	3	48	junction_25	202.137530693533	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGTCATATAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	56640147	56760333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830
ES.10831.84	chr14	+	3527	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-6	5966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	110.742144124119	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACATACATTTAGTAA	NA	False	NA	NA	False	AATAAA	-8	NA	56640147	56732858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767_56726890_56732840
ES.10831.85	chr14	+	4568	35	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	224.465393329948	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTCATGTTATT	NA	False	NA	14	True	AATAAA	-15	NA	56640148	56762486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730645_56730731_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56759830_56760021_56761762_56761863_56762269
ES.10831.86	chr14	+	4638	3	NNC	ENSMUSG00000000365.10	novel	1609	11	NA	NA	-5	-27294	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	273.5	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGCTGTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	56640148	56652076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56647666
ES.10831.87	chr14	+	5147	37	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_15	215.170281405216	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640148	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705127_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.88	chr14	+	3814	27	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	166.844628854257	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTGGTTTCCTTTT	NA	False	NA	6	True	ATTAAA	-14	NA	56640148	56726890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56657766_56658050_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708725_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.89	chr14	+	4586	34	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	206.185630520755	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640148	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.9	chr14	+	5062	36	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-35	5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_29	208.710102627485	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTATTAAGATTCT	NA	False	NA	22	True	AATAAA	-23	NA	56640118	56762494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.90	chr14	+	4023	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	720	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	107.474124792901	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56640148	56725243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.91	chr14	+	5063	36	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	216.975623572073	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640148	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.92	chr14	+	5058	36	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	213.938282154991	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640148	56762489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ES.10831.93	chr14	+	5671	25	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	35	junction_1	107.474124792901	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGGTTTCCTTTTT	NA	False	NA	7	True	ATTAAA	-15	NA	56640148	56726891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.94	chr14	+	1469	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-6	146	-3	-146	multi-exon	FALSE	canonical	3	453	junction_4	33.16700167335	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTATAGTTTCTCACA	NA	False	NA	NA	False	NA	NA	NA	56640150	56679224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
ES.10831.95	chr14	+	3449	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	110.177355205142	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGGTTTCCTTTTT	NA	False	NA	7	True	ATTAAA	-15	NA	56640150	56726891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719593_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
ES.10831.96	chr14	+	2930	21	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-3	-4840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.103431940478	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTCTTTGTATTCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	56640150	56719683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662018_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423
ES.10831.97	chr14	+	4212	30	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-3	-8525	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	212.953026925131	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATATTTATATGTGTG	NA	False	NA	NA	False	AATAAA	-40	NA	56640150	56753964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792
ES.10831.98	chr14	+	4529	21	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	-3	748	intron_retention	FALSE	canonical	0	0	junction_3	158.04670195863	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCACATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56640150	56725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56720682_56720820_56720940_56722610_56722702_56724418
ES.10831.99	chr14	+	3109	10	ISM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	-4	1126	-1	-1126	5prime_fragment	FALSE	canonical	3	453	junction_4	32.6602412425979	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAGTGTTGTGAATA	NA	False	NA	NA	False	NA	NA	NA	56640152	56678244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060
ES.10832.1	chr14	+	1982	1	Antisense	novelGene_ENSMUSG00000064128.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCAAATTCAGTGCTG	NA	False	NA	NA	False	AATAAA	-38	NA	56768882	56770864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_56768900_56770900
ES.10833.1	chr14	+	210	1	Intergenic	novelGene_9058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCCCTAAAGAAGCTAG	NA	False	NA	NA	False	AAGAAA	-7	NA	56777537	56777747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56777500_56777700
ES.10834.1	chr14	+	159	1	Intergenic	novelGene_9059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATTTAATATGGAA	NA	False	NA	NA	False	NA	NA	NA	56811037	56811196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56811000_56811200
ES.10835.1	chr14	-	4795	18	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-50	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.0145275956964	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACACAAAAGTAAGTGGC	NA	False	NA	NA	False	ATTAAA	-34	NA	56812932	56764200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809244_56809659_56812801
ES.10835.10	chr14	-	4504	17	NNC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	17.6191257941477	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTTTTACCATACTGC	2394	False	NA	NA	False	AATAAA	-24	NA	56809301	56764238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809009
ES.10835.12	chr14	-	6612	12	NNC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	1	906	intron_retention	FALSE	canonical	1	1	junction_3	17.7293705052491	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAACAGAAAC	2393	False	NA	NA	False	NA	NA	NA	56809302	56768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56769807_56770032_56772298_56772807_56773053_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
ES.10835.2	chr14	-	4396	17	NNC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.8180912277382	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTACATTCTTTGAA	2393	False	NA	NA	False	AATAAA	-45	NA	56809302	56764217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809139
ES.10835.3	chr14	-	4376	17	NIC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	11.6039796513955	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTACATTCTTTGAA	2358	False	NA	NA	False	AATAAA	-45	NA	56809337	56764217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
ES.10835.4	chr14	-	4376	17	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	22.5304481480063	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTTTACATTCTTTGA	NA	False	NA	NA	False	AATAAA	-44	NA	56812932	56764218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796303_56801405_56801534_56802125_56802625_56812801
ES.10835.6	chr14	-	4231	18	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.9074900723703	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTTTTACATTCTTT	2394	False	NA	NA	False	AATAAA	-42	NA	56809301	56764220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780259_56780364_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
ES.10835.7	chr14	-	4374	16	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-11	-4	intron_retention	FALSE	canonical	2	14	junction_15	15.3536097818504	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTTTTACATTCTT	2381	False	NA	NA	False	AATAAA	-41	NA	56809314	56764221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809244
ES.10835.8	chr14	-	4168	16	NNC	ENSMUSG00000064128.9	novel	4756	18	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.2316325849479	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTTTTACATTCTT	2379	False	NA	NA	False	AATAAA	-41	NA	56809316	56764221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809244
ES.10835.9	chr14	-	4330	17	NNC	ENSMUSG00000064128.9	novel	4363	17	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	18.4577219612822	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTTTTACATTCTT	2394	False	NA	NA	False	AATAAA	-41	NA	56809301	56764221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787014_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796288_56801409_56801534_56802125_56802625_56809194
ES.10836.1	chr14	+	6103	36	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	5.02759730824552	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTAGATGCTGTCTCAG	1087	False	NA	2	True	AATAAA	-14	NA	56813075	56897249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56885204_56885485_56886407_56889704_56889805_56892938_56893072_56896694
ES.10836.2	chr14	+	5996	35	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	5.54409814320177	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTAGATGCTGTCTCA	1097	False	NA	1	True	AATAAA	-13	NA	56813085	56897248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56875304_56875428_56878711_56878775_56884630_56885204_56885485_56886407_56889704_56889805_56892938_56893072_56896694
ES.10836.4	chr14	+	562	4	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	11	-73778	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.0332779621949	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTGCTTATGTGTG	1098	False	NA	NA	False	NA	NA	NA	56813086	56823471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56823339
ES.10836.5	chr14	+	6361	35	FSM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	30	-4	30	4	multi-exon	FALSE	canonical	2	8	junction_14	4.43757157942172	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTCTCAGTGTCTT	1117	False	NA	8	True	AATAAA	-20	NA	56813105	56897255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56886407_56889704_56889805_56892938_56893072_56896694
ES.10836.7	chr14	+	5815	37	NNC	ENSMUSG00000054509.8	novel	6387	35	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	5.49719344779399	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGATGCTGTCTCAGTG	1128	False	NA	4	True	AATAAA	-16	NA	56813116	56897251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56885204_56885485_56885934_56886182_56886407_56889704_56889805_56892938_56893072_56896694
ES.10836.8	chr14	+	652	3	ISM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	51	73780	51	-73778	5prime_fragment	FALSE	canonical	3	20	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTGCTTATGTGTG	1138	False	NA	NA	False	NA	NA	NA	56813126	56823471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56813188_56821615_56821749_56823013
ES.10836.9	chr14	+	4847	23	ISM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	26642	3	26642	-1	3prime_fragment	FALSE	canonical	2	8	junction_2	4.22115882408869	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTAGATGCTGTCTCA	NA	False	NA	1	True	AATAAA	-13	NA	56839717	56897248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56886407_56889704_56889805_56892938_56893072_56896694
ES.10837.1	chr14	-	223	1	Intergenic	novelGene_9060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGCATCAAGAGAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	56827209	56826986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56827000_56827200
ES.10838.1	chr14	+	2975	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	-29	-7	-29	7	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCGTTGTGAGTTTGTA	1749	False	NA	39	True	ATTAAA	-25	NA	56905675	56934894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.10	chr14	+	4707	13	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	14	0	intron_retention	FALSE	canonical	3	627	junction_3	86.674799297912	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1792	False	NA	32	True	ATTAAA	-18	NA	56905718	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.12	chr14	+	3687	1	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	15	-2028	mono-exon	FALSE	NA	NA	NA	NA	NA	498	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAGAAAAAAATCTAAA	1793	False	NA	NA	False	NA	NA	NA	56905719	56909406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56905700_56909400
ES.10838.13	chr14	+	3452	2	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	18	-2060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACTAAAAAAAAAA	1796	False	NA	NA	False	NA	NA	NA	56905722	56909374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56908202_56908401
ES.10838.14	chr14	+	3336	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.51058660476	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1797	False	NA	32	True	ATTAAA	-18	NA	56905723	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912613_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.15	chr14	+	3028	15	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	307.945462969119	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1803	False	NA	29	True	ATTAAA	-15	NA	56905729	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56914492_56914610_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.16	chr14	+	2748	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.643093456827	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1803	False	NA	32	True	ATTAAA	-18	NA	56905729	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56905856_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.17	chr14	+	4243	13	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	26	0	intron_retention	FALSE	canonical	3	627	junction_3	91.3343978040159	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1804	False	NA	32	True	ATTAAA	-18	NA	56905730	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.18	chr14	+	2903	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	238.03087662077	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1806	False	NA	32	True	ATTAAA	-18	NA	56905732	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916268_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.2	chr14	+	3198	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	-259	0	259	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAAGCTTGGGCTTGT	1778	False	NA	NA	False	AATAAA	-15	NA	56905704	56935146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.20	chr14	+	3438	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	238.02645171488	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1810	False	NA	29	True	ATTAAA	-15	NA	56905736	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914610_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.21	chr14	+	6131	11	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	32	0	intron_retention	FALSE	canonical	3	627	junction_4	96.2816701143058	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1810	False	NA	32	True	ATTAAA	-18	NA	56905736	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56928519_56930880_56931036_56933077_56934200_56934587
ES.10838.22	chr14	+	2875	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.643093456827	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1812	False	NA	29	True	ATTAAA	-15	NA	56905738	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906012_56909878_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.23	chr14	+	2746	13	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	34	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_9	250.613192434521	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTCTACTAGTCGTT	1812	False	NA	28	True	ATTAAA	-14	NA	56905738	56934883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.24	chr14	+	6263	12	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	35	0	intron_retention	FALSE	canonical	1	2	junction_4	341.573485916269	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1813	False	NA	32	True	ATTAAA	-18	NA	56905739	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56914474_56914610_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56928519_56930880_56931036_56933077_56934200_56934587
ES.10838.25	chr14	+	7576	11	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	36	0	intron_retention	FALSE	canonical	3	627	junction_4	96.752726059786	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1814	False	NA	29	True	ATTAAA	-15	NA	56905740	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.26	chr14	+	2888	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	236.691495211225	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1816	False	NA	29	True	ATTAAA	-15	NA	56905742	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906012_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.27	chr14	+	7964	11	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	38	0	intron_retention	FALSE	canonical	3	627	junction_4	96.2478571190029	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1816	False	NA	32	True	ATTAAA	-18	NA	56905742	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56931036_56933077_56934200_56934587
ES.10838.28	chr14	+	2869	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	92	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	300.960867534273	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTCTACTAGTCGTT	1870	False	NA	28	True	ATTAAA	-14	NA	56905796	56934883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912233_56913978_56914066_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.29	chr14	+	6254	14	NNC	ENSMUSG00000079184.11	novel	950	4	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.643093456827	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	2103	False	NA	32	True	ATTAAA	-18	NA	56906029	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56908202_56908401_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.3	chr14	+	2975	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_3	214.971059012644	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	32	True	ATTAAA	-18	NA	56905704	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56911347_56912233_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.30	chr14	+	2698	14	NNC	ENSMUSG00000079184.11	novel	950	4	NA	NA	905	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.643093456827	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	2683	False	NA	29	True	ATTAAA	-15	NA	56906609	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906689_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.31	chr14	+	4646	15	NNC	ENSMUSG00000079184.11	novel	950	4	NA	NA	-1883	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	386.698934995341	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	3879	False	NA	29	True	ATTAAA	-15	NA	56907805	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56908202_56908401_56910018_56911347_56912233_56913978_56914076_56914474_56914610_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.32	chr14	+	14237	6	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	-882	0	intron_retention	FALSE	canonical	3	627	junction_2	122.670941954482	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	255	False	NA	32	True	ATTAAA	-18	NA	56908806	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56910018_56911347_56914076_56916020_56916276_56922414_56931036_56933077_56934200_56934587
ES.10838.33	chr14	+	2101	12	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	5885	123	1901	-120	3prime_fragment	FALSE	canonical	3	627	junction_2	94.9921266854859	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTACATATATTTGTG	3038	False	NA	-91	True	NA	NA	NA	56911589	56934764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.34	chr14	+	3873	11	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	2039	-1	intron_retention	FALSE	canonical	3	627	junction_2	95.7846021028432	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTTCTACTAGTCGTT	3176	False	NA	28	True	ATTAAA	-14	NA	56911727	56934883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.35	chr14	+	3996	10	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	3689	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	282.086187687293	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAATTTTCTACTAGT	4826	False	NA	24	True	ATTAAA	-10	NA	56913377	56934879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56928519_56930880_56931036_56933077_56933206_56934115_56934195_56934587
ES.10838.36	chr14	+	10028	5	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	6540	0	intron_retention	TRUE	non_canonical	0	0	junction_4	381.63496957171	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	7677	False	NA	32	True	ATTAAA	-18	NA	56916228	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56916276_56922414_56922541_56922618_56928519_56930880_56931742_56931793
ES.10838.37	chr14	+	4480	2	ISM	ENSMUSG00000079184.11	ENSMUST00000138174.8	950	4	-2229	-3	-2229	0	intron_retention	FALSE	canonical	3	940	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	3449	False	NA	32	True	ATTAAA	-18	NA	56928365	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56931036_56933077
ES.10838.38	chr14	+	3525	2	NIC	ENSMUSG00000079184.11	novel	950	4	NA	NA	91	0	intron_retention	FALSE	canonical	3	933	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1806	False	NA	29	True	ATTAAA	-15	NA	56930971	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56934200_56934587
ES.10838.4	chr14	+	6508	12	NIC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	627	junction_3	85.1344100149583	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1779	False	NA	29	True	ATTAAA	-15	NA	56905705	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_56906022_56909861_56910018_56911347_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.5	chr14	+	2924	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.643093456827	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTCTACTAGTCGT	1786	False	NA	27	True	ATTAAA	-13	NA	56905712	56934882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906026_56909867_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.6	chr14	+	3120	15	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	358.563695135729	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTACTAGTCGTTG	1786	False	NA	29	True	ATTAAA	-15	NA	56905712	56934884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_56906022_56909861_56910018_56910301_56910500_56911347_56912197_56913978_56914076_56916026_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ES.10838.7	chr14	+	4226	12	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	11	0	11	0	intron_retention	FALSE	canonical	3	627	junction_4	91.4263466376303	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1789	False	NA	32	True	ATTAAA	-18	NA	56905715	56934887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077
ES.10838.9	chr14	+	541	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	13	23459	13	-6	5prime_fragment	FALSE	canonical	3	870	junction_1	10.5	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAGAAAAAGAAAAAAAT	1791	False	NA	-43	True	NA	NA	NA	56905717	56911428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_56906022_56909861_56910018_56911347
ES.10839.1	chr14	+	12786	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTACTAAATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	56960860	56973646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_56960900_56973600
ES.1084.1	chr1	+	179	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	94010165	94010344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_94010200_94010300
ES.10840.1	chr14	+	157	1	Intergenic	novelGene_9065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACACAAGGGCTT	NA	False	NA	NA	False	NA	NA	NA	56974474	56974631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_56974500_56974600
ES.10841.1	chr14	+	2247	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTATTTTAAGAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	57007884	57010131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57007900_57010100
ES.10841.2	chr14	+	246	2	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57009904	57018750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57010110_57018709
ES.10841.3	chr14	+	2802	1	Intergenic	novelGene_9066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATGCGACTTGCAATT	NA	False	NA	NA	False	NA	NA	NA	57011630	57014432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57011600_57014400
ES.10841.4	chr14	+	183	1	Intergenic	novelGene_9067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTACCAAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	57012148	57012331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57012100_57012300
ES.10841.5	chr14	+	1249	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGTCTGCTGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	57015104	57016353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57015100_57016400
ES.10842.1	chr14	-	281	1	Intergenic	novelGene_9061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTTATTTATTATT	NA	False	NA	NA	False	ATTAAA	-32	NA	56908393	56908112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56908100_56908400
ES.10842.2	chr14	-	153	1	Intergenic	novelGene_9062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	56908395	56908242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56908200_56908400
ES.10843.1	chr14	-	3425	9	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	601	5	NA	NA	-1	5	intron_retention	FALSE	canonical	1	3	junction_2	158.133596604264	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCATTTTCTTTTAT	NA	False	NA	2	True	AATAAA	-20	NA	57015774	56933731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936764_56938276_56938464_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.10	chr14	-	7586	1	Intergenic	novelGene_9063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAACCAAACCCATGCA	NA	False	NA	NA	False	NA	NA	NA	56953161	56945575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56945600_56953200
ES.10843.11	chr14	-	4115	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	1	-2	1	2	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTTATTGGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	57015772	56958164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.12	chr14	-	2752	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	-341	1703	-341	1573	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCTGGTTTTAA	NA	False	NA	28	True	AGTAAA	-15	NA	57016114	56959869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.13	chr14	-	2632	3	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	48175	1731	31726	1545	3prime_fragment	FALSE	canonical	3	362	junction_2	8.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAAGTAAATCTCTT	NA	False	NA	0	True	AATAAA	-22	NA	56967598	56959897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_56960738_56962762_56962933_56965976
ES.10843.14	chr14	-	2234	10	NNC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	3	1537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	112.283481629818	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTTGAAAGTA	NA	False	NA	-8	True	AATAAA	-14	NA	57015770	56959905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247_57015279_57015416
ES.10843.16	chr14	-	2108	10	NNC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	1	1537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.283481629818	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTTGAAAGTA	NA	False	NA	-8	True	AATAAA	-14	NA	57015772	56959905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56960025_56960290_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.18	chr14	-	2848	1	NIC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	36571	1537	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTTGAAAGTA	NA	False	NA	-8	True	AATAAA	-14	NA	56962753	56959905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56959900_56962800
ES.10843.19	chr14	-	2144	7	NIC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	1	1535	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	125.40334923757	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATGTTTGAAAG	NA	False	NA	-10	True	AATAAA	-12	NA	57015772	56959907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56960738_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.2	chr14	-	3651	11	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	2863	8	NA	NA	1	5	intron_retention	FALSE	canonical	1	3	junction_2	156.241127748106	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCATTTTCTTTTAT	NA	False	NA	2	True	AATAAA	-20	NA	57015772	56933731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936764_56938276_56938464_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.20	chr14	-	4040	8	FSM	ENSMUSG00000021938.13	ENSMUST00000163924.2	2863	8	20	-1197	20	1197	multi-exon	FALSE	canonical	3	306	junction_7	28.9750068232634	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTTAGTGGTATTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	57015753	56960245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.22	chr14	-	2092	10	NNC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	-1788	1193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	112.283481629818	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTCTTAGTGGTAT	NA	False	NA	-5	True	AATAAA	-20	NA	57017561	56960249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247_57015684_57017410
ES.10843.23	chr14	-	3231	1	NIC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	35840	1189	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAAATGTTCTTAGTG	NA	False	NA	-9	True	AATAAA	-16	NA	56963484	56960253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56960300_56963500
ES.10843.24	chr14	-	2012	9	NNC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	36	1188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.032323082838	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAAAATGTTCTTAGT	NA	False	NA	-10	True	AATAAA	-15	NA	57015737	56960254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56960760_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.25	chr14	-	1440	1	NIC	ENSMUSG00000021938.13	novel	4114	9	NA	NA	36442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACTGTTTTCTTAC	NA	False	NA	NA	False	ATTAAA	-10	NA	56962882	56961442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56961400_56962900
ES.10843.26	chr14	-	3037	1	Intergenic	novelGene_9064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTAATGGACAGTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	56969183	56966146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_56966100_56969200
ES.10843.27	chr14	-	5591	7	NNC	ENSMUSG00000021938.13	novel	601	5	NA	NA	-25	11172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.40334923757	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATGTGTCCAAATATTA	NA	False	NA	NA	False	AATAAA	-13	NA	57015798	56974819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_56979071_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.3	chr14	-	3519	9	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	601	5	NA	NA	-29	3	intron_retention	FALSE	canonical	3	7	junction_1	157.487648325194	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGATCATTTTCTTTT	NA	False	NA	0	True	AATAAA	-18	NA	57015802	56933733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936832_56938276_56938464_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.4	chr14	-	3545	10	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	601	5	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_3	158.878010505615	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGGATCATTTTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	57015772	56933735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936832_56938276_56938464_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.6	chr14	-	3402	9	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	601	5	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	158.623571703578	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGGATCATTTTCT	NA	False	NA	-3	True	AATAAA	-15	NA	57015784	56933736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936832_56938372_56938464_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.7	chr14	-	3726	11	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	2863	8	NA	NA	-11	0	intron_retention	FALSE	canonical	1	3	junction_3	155.637559734146	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGGATCATTTTCT	NA	False	NA	-3	True	AATAAA	-15	NA	57015784	56933736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936832_56938276_56938464_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ES.10843.8	chr14	-	3402	2	NIC	ENSMUSG00000097743.2	novel	1299	3	NA	NA	-2461	-200	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAAAAGGTTCATGT	NA	False	NA	NA	False	AGTAAA	-12	NA	56941186	56935003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_56935496_56938276
ES.10843.9	chr14	-	6961	6	Fusion	ENSMUSG00000097743.2_ENSMUSG00000021938.13	novel	1299	3	NA	NA	27188	-366	multi-exon	TRUE	non_canonical	0	0	junction_5	143.124281657586	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAAGCCCAAGCTTATA	NA	False	NA	NA	False	NA	NA	NA	56972136	56935169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_56935496_56936605_56936832_56938276_56938464_56962762_56962933_56965976_56971359_56971466
ES.10844.1	chr14	-	168	1	Intergenic	novelGene_9068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57018544	57018376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57018400_57018500
ES.10845.1	chr14	+	165	1	Intergenic	novelGene_9069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATTAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	57042772	57042937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57042800_57042900
ES.10846.1	chr14	-	6007	6	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_5	17.1464281994822	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTGGTGAAAATGAGAT	8905	False	NA	-10	True	AATAAA	-31	NA	57049089	57028041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ES.10846.10	chr14	-	3051	9	NNC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	61	404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.3692574844313	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8965	False	NA	0	True	NA	NA	NA	57049029	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57043376_57043439_57048196_57048317_57048930
ES.10846.11	chr14	-	3710	6	NNC	ENSMUSG00000040123.18	novel	2455	7	NA	NA	-28	404	intron_retention	FALSE	canonical	1	1	junction_5	31.192306743811	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8793	False	NA	0	True	NA	NA	NA	57049201	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049118
ES.10846.12	chr14	-	3770	6	NIC	ENSMUSG00000040123.18	novel	2455	7	NA	NA	-18	404	intron_retention	FALSE	canonical	3	42	junction_5	17.1464281994822	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8803	False	NA	0	True	NA	NA	NA	57049191	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ES.10846.13	chr14	-	2944	8	NNC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-6	404	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	32.5526261519367	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8834	False	NA	0	True	NA	NA	NA	57049160	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57043376_57043439_57049048
ES.10846.14	chr14	-	2840	7	NNC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-15	404	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.8963665535998	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8806	False	NA	0	True	NA	NA	NA	57049188	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049118
ES.10846.15	chr14	-	3158	8	NNC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-19	404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.4401284692667	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTGTTTTCTTGT	8802	False	NA	0	True	NA	NA	NA	57049192	57030380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57046860_57047105_57049048
ES.10846.16	chr14	-	3320	11	NNC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	66	402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.7324782235993	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	8970	False	NA	-2	True	NA	NA	NA	57049024	57030382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57043376_57043439_57046860_57046941_57047997_57048054_57048196_57048317_57048790
ES.10846.17	chr14	-	3059	8	FSM	ENSMUSG00000040123.18	ENSMUST00000173954.3	5357	8	-40	2338	-40	402	multi-exon	FALSE	canonical	2	5	junction_7	29.0123126571166	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	9033	False	NA	-2	True	NA	NA	NA	57048961	57030382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57048790
ES.10846.18	chr14	-	2957	8	NNC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	-78	402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.2924520806954	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	8995	False	NA	-2	True	NA	NA	NA	57048999	57030382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57048930
ES.10846.19	chr14	-	3737	6	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	19	402	intron_retention	FALSE	canonical	1	1	junction_5	31.192306743811	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	9092	False	NA	-2	True	NA	NA	NA	57048902	57030382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048790
ES.10846.2	chr14	-	5359	8	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.1707206613219	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTTGGTGAAAATGAGA	8803	False	NA	-11	True	AATAAA	-30	NA	57049191	57028042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034069_57034268_57035127_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ES.10846.20	chr14	-	3816	7	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	60	402	intron_retention	FALSE	canonical	2	5	junction_6	30.5323143934786	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTATTTTTGTTTTCTT	9133	False	NA	-2	True	NA	NA	NA	57048861	57030382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57048790
ES.10846.21	chr14	-	3270	7	NNC	ENSMUSG00000040123.18	novel	2455	7	NA	NA	-1	401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.4698527689268	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTATTTTTGTTTTCT	8903	False	NA	-3	True	NA	NA	NA	57049091	57030383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034349_57034745_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ES.10846.22	chr14	-	2885	7	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	13	401	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	28.8963665535998	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTATTTTTGTTTTCT	9086	False	NA	-3	True	NA	NA	NA	57048908	57030383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048790
ES.10846.23	chr14	-	2970	8	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-30	399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.2924520806954	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTTATTTTTGTTTT	8791	False	NA	-5	True	NA	NA	NA	57049203	57030385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049118
ES.10846.24	chr14	-	3134	9	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-17	398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.4453824917071	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGATTTATTTTTGTTT	8804	False	NA	-6	True	NA	NA	NA	57049190	57030386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035286_57036366_57036650_57041605_57041697_57041871_57042321_57043376_57043487_57048196_57048317_57049048
ES.10846.25	chr14	-	3919	7	ISM	ENSMUSG00000040123.18	ENSMUST00000039812.16	5290	8	13	2353	-6	390	intron_retention	FALSE	canonical	1	3	junction_6	28.2055944017416	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAGACTTGATTTAT	8834	False	NA	-14	True	NA	NA	NA	57049160	57030394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57047997
ES.10846.26	chr14	-	3920	1	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	14607	390	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAGACTTGATTTAT	NA	False	NA	-14	True	NA	NA	NA	57034314	57030394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57030400_57034300
ES.10846.28	chr14	-	2975	9	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-4	381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.0614644082269	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTCTTCAGAC	8900	False	NA	-23	True	NA	NA	NA	57049094	57030403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57043376_57043439_57048196_57048317_57049048
ES.10846.3	chr14	-	5375	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	-22	-2	-22	-1	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTTGGTGAAAATGAGA	8799	False	NA	-11	True	AATAAA	-30	NA	57049195	57028042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ES.10846.30	chr14	-	2508	7	NIC	ENSMUSG00000040123.18	novel	5357	8	NA	NA	20	31	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	28.8963665535998	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATTCAAACAGCTTAAG	9093	False	NA	NA	False	AAAAAG	-7	NA	57048901	57030753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048790
ES.10846.31	chr14	-	1659	6	ISM	ENSMUSG00000040123.18	ENSMUST00000039812.16	5290	8	13	6578	-6	23	5prime_fragment	FALSE	canonical	0	0	junction_5	38.8103079091109	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTTGTAATAATTCA	8834	False	NA	NA	False	NA	NA	NA	57049160	57034619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57047997_57048054_57049048
ES.10846.5	chr14	-	5252	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTCTTTGGTGAAAATG	8799	False	NA	-14	True	AATAAA	-27	NA	57049195	57028045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ES.10846.6	chr14	-	2915	7	NIC	ENSMUSG00000040123.18	novel	5290	8	NA	NA	-18	406	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	15.7630016882008	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGTTTTCTTGTGT	8803	False	NA	2	True	NA	NA	NA	57049191	57030378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ES.10846.7	chr14	-	3891	7	NIC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	-17	406	intron_retention	FALSE	canonical	3	22	junction_5	25.7983634278525	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGTTTTCTTGTGT	8804	False	NA	2	True	NA	NA	NA	57049190	57030378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57031958_57034060_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ES.10846.8	chr14	-	3014	9	NNC	ENSMUSG00000040123.18	novel	5351	8	NA	NA	29	405	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	32.7175411667809	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8869	False	NA	1	True	NA	NA	NA	57049125	57030379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57046015_57046062_57048196_57048317_57049048
ES.10846.9	chr14	-	3049	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	-33	2335	-33	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8788	False	NA	1	True	NA	NA	NA	57049206	57030379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ES.10847.1	chr14	+	6170	3	Antisense	novelGene_ENSMUSG00000088180.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGCCATCCACTTTGC	NA	False	NA	NA	False	NA	NA	NA	57072662	57092837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57072790_57086006_57087062_57087849
ES.10847.2	chr14	+	4869	4	Genic_Genomic	ENSMUSG00000114500.2	novel	943	1	NA	NA	-30180	840	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAAGCATTTTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	57072689	57104652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_57072790_57086006_57087062_57087849_57087942_57101030
ES.10847.3	chr14	+	1672	2	Genic_Genomic	ENSMUSG00000114500.2	novel	943	1	NA	NA	-302	1203	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	57102567	57105015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_57102954_57103729
ES.10847.4	chr14	+	2056	1	Intergenic	novelGene_9071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCCAGCTCCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	57104002	57106058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57104000_57106100
ES.10848.1	chr14	-	403	1	Intergenic	novelGene_9070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCCTAGGTG	NA	False	NA	NA	False	ATTAAA	-8	NA	57078145	57077742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57077700_57078100
ES.10849.1	chr14	-	175	1	Intergenic	novelGene_9072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	57114548	57114373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57114400_57114500
ES.1085.1	chr1	+	181	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATAACACTATA	1084	False	NA	NA	False	NA	NA	NA	94017994	94018175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_94018000_94018200
ES.10850.1	chr14	+	5011	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-127	183	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	40.829910570833	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTGACTTTCTGCA	NA	False	NA	22	True	ATTAAA	-16	NA	57123982	57197992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165801_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.10	chr14	+	4393	23	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-96	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	40.8737473586714	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTATGTCCGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	57124013	57194920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179453_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ES.10850.11	chr14	+	8528	24	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-87	-5	intron_retention	FALSE	canonical	2	100	junction_11	26.5001337514904	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGTTTTTTGTTTG	NA	False	NA	16	True	AATAAA	-12	NA	57124022	57197804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.15	chr14	+	4088	24	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	184	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	41.8473687157389	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124043	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.16	chr14	+	4669	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	49.4290843026654	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGCTGGGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-11	NA	57124043	57197803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165755_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193682_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.17	chr14	+	4939	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	184	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	40.1466063322916	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124043	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.18	chr14	+	4627	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41.1382957230851	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124043	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140279_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.19	chr14	+	4680	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	49.635076626898	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124043	57197806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.2	chr14	+	6281	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-119	-882	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTGTCTTGCTATTTAG	NA	False	NA	NA	False	CATAAA	-23	NA	57123990	57199276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.21	chr14	+	4752	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	40.1466063322916	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124043	57197806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.22	chr14	+	4822	24	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	187	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	41.085093125447	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTCTGCATCAC	NA	False	NA	26	True	ATTAAA	-20	NA	57124043	57197996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.23	chr14	+	3965	23	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-140	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	25.5741104237653	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGGTGTCTTCCTTATG	NA	False	NA	NA	False	AATAAA	-13	NA	57124043	57194523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ES.10850.24	chr14	+	6841	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	-347	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	47.0193832371289	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACGCTCAGTCTTTTT	NA	False	NA	11	True	ATTAAA	-13	NA	57124043	57199811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.25	chr14	+	4777	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-65	183	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	40.7808335972781	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTGACTTTCTGCA	NA	False	NA	22	True	ATTAAA	-16	NA	57124044	57197992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194474_57194561_57195638_57195760_57197171
ES.10850.26	chr14	+	6761	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-65	-343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.9974999374969	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57124044	57199815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148533_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.27	chr14	+	4041	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-62	-138	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	46.8552047049152	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGTCTTCCTTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	57124047	57194525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ES.10850.28	chr14	+	4703	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-60	-6	combination_of_known_junctions	FALSE	canonical	2	9	junction_21	39.5124584783078	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGCTGGGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-11	NA	57124049	57197803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193682_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.29	chr14	+	4888	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-55	184	combination_of_known_junctions	FALSE	canonical	2	9	junction_21	39.5124584783078	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124054	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193682_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.3	chr14	+	4882	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-115	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	54.3406146450332	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGTTTTTTGTTTG	NA	False	NA	16	True	AATAAA	-12	NA	57123994	57197804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169718_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.32	chr14	+	6623	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-54	-343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	41.395871140103	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57124055	57199815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.34	chr14	+	4869	24	NIC	ENSMUSG00000021945.10	novel	741	7	NA	NA	-53	184	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.9394869032539	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124056	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.35	chr14	+	4521	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-48	-222	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGATTAGGTATGTT	NA	False	NA	NA	False	AATACA	-22	NA	57124061	57197587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.36	chr14	+	4794	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-47	169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	40.3088079704672	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTCCTTTTCTCACT	NA	False	NA	8	True	ATTAAA	-2	NA	57124062	57197978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194389_57194505_57194561_57195638_57195760_57197171
ES.10850.38	chr14	+	6717	24	NIC	ENSMUSG00000021945.10	novel	741	7	NA	NA	-33	-297	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.9394869032539	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAACTCATGTTTTTCTT	NA	False	NA	35	True	CATAAA	-18	NA	57124076	57199861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.39	chr14	+	4782	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-33	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	41.1278494453576	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGGGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-13	NA	57124076	57197805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158253_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.4	chr14	+	6860	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-113	-297	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAACTCATGTTTTTCTT	NA	False	NA	35	True	CATAAA	-18	NA	57123996	57199861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.40	chr14	+	3977	22	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-30	2	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	25.909400845141	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGTTTTTTTTAAGAA	NA	False	NA	NA	False	AATAAA	-21	NA	57124079	57194014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636
ES.10850.41	chr14	+	4585	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	48.8670121567367	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124090	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169715_57174963_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57197171
ES.10850.42	chr14	+	1119	3	FSM	ENSMUSG00000021945.10	ENSMUST00000223669.2	1281	3	-14	176	-14	-176	multi-exon	FALSE	canonical	3	109	junction_1	21.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTTGTGAAGTAGAATA	NA	False	NA	NA	False	ATTAAA	-20	NA	57124095	57141148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_57124156_57125251_57125315_57140152
ES.10850.43	chr14	+	4967	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-11	183	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	47.0193832371289	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTGACTTTCTGCA	NA	False	NA	22	True	ATTAAA	-16	NA	57124098	57197992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.44	chr14	+	6208	22	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-11	-7	intron_retention	FALSE	canonical	1	2	junction_17	41.9828817290648	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124098	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57195760_57197171
ES.10850.46	chr14	+	2855	16	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	4	1218	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	23.9484631842816	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTTAACCCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	57124113	57180829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709
ES.10850.47	chr14	+	5045	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	39	183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	53.1533257818047	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTGTGACTTTCTGCA	NA	False	NA	22	True	ATTAAA	-16	NA	57124148	57197992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193682_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.48	chr14	+	4910	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	40	-3	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124149	57197806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.49	chr14	+	4502	23	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	51	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	46.5336455190141	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTATGTCCGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	57124160	57194920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163414_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308
ES.10850.5	chr14	+	4808	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTGTTTGTTTGT	NA	False	NA	21	True	AATAAA	-17	NA	57123996	57197809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.50	chr14	+	4741	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	65	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	39.2976533085063	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124174	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124274_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.51	chr14	+	6811	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	93	-345	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	40.0775073728672	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGCTCAGTCTTTTTTT	NA	False	NA	13	True	ATTAAA	-15	NA	57124202	57199813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124361_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.52	chr14	+	3961	23	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	98	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	48.9717408814377	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGGTGTCTTCCTTATG	NA	False	NA	NA	False	AATAAA	-13	NA	57124207	57194523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124361_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187678_57187786_57193636_57193752_57194308
ES.10850.53	chr14	+	4873	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	138	184	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	47.1002630842832	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124247	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.54	chr14	+	4870	26	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	154	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	51.7347078855192	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57124263	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57182142_57182221_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.55	chr14	+	4980	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	160	187	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTTTCTGCATCAC	NA	False	NA	26	True	ATTAAA	-20	NA	57124269	57197996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.56	chr14	+	6832	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	170	-300	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAACTCATGTTTTT	NA	False	NA	32	True	CATAAA	-15	NA	57124279	57199858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.57	chr14	+	4581	24	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	190	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.4322338186552	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57124299	57197806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124361_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.58	chr14	+	4700	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	192	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.4564901807349	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGCTGGGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-11	NA	57124301	57197803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124361_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165794_57169545_57169718_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.6	chr14	+	5000	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-112	193	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTGCATCACCCCATC	NA	False	NA	32	True	ATTAAA	-26	NA	57123997	57198002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.60	chr14	+	4533	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	193	-227	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTATTTGATTAGGT	NA	False	NA	NA	False	AATACA	-17	NA	57124302	57197582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.63	chr14	+	5551	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	230	828	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTTATTTAGC	NA	False	NA	NA	False	AGTAAA	-11	NA	57124339	57198637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.65	chr14	+	4707	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	232	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	46.0900198584851	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGGCTGGGTTTTTTGT	NA	False	NA	13	True	AATAAA	-9	NA	57124341	57197801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.66	chr14	+	5534	20	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	13175	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	41.5062655884927	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGTTTTTTTTAAGAA	NA	False	NA	NA	False	AATAAA	-21	NA	57138450	57194014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185409_57185499_57186966_57187136_57187633_57187786_57193636
ES.10850.67	chr14	+	4758	22	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	15255	-7	intron_retention	FALSE	canonical	2	100	junction_10	26.3622075402376	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57140530	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57194561_57195638_57195760_57197171
ES.10850.70	chr14	+	6256	16	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	33689	343	743	-343	intron_retention	FALSE	canonical	2	100	junction_4	27.0732340144283	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57158964	57199815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638
ES.10850.71	chr14	+	5127	17	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	33752	-3	806	3	3prime_fragment	FALSE	canonical	2	100	junction_4	28.0122740954746	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATGTTTTTATCTGGC	NA	False	NA	NA	False	CATAAA	-9	NA	57159027	57200161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.72	chr14	+	5406	16	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	35524	2169	2578	180	3prime_fragment	FALSE	canonical	2	100	junction_3	28.882905363246	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCACTTGTGACTTTCT	NA	False	NA	19	True	ATTAAA	-13	NA	57160799	57197989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.73	chr14	+	4665	15	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	40366	297	7420	-297	3prime_fragment	FALSE	canonical	2	100	junction_2	26.4560667784868	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAACTCATGTTTTTCTT	NA	False	NA	35	True	CATAAA	-18	NA	57165641	57199861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.74	chr14	+	3908	11	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-19	-7	intron_retention	FALSE	canonical	3	136	junction_2	18.1229136730273	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57174973	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57195760_57197171
ES.10850.75	chr14	+	209	1	Intergenic	novelGene_9076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATTAGAAAAAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	57176580	57176789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57176600_57176800
ES.10850.76	chr14	+	5535	8	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	4914	-343	intron_retention	FALSE	canonical	3	161	junction_2	14.4518906326177	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTCAGTCTTTTTTTTT	NA	False	NA	-11	True	ATTAAA	-17	NA	57180771	57199815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57195760_57197171
ES.10850.77	chr14	+	7176	2	NIC	ENSMUSG00000021945.10	novel	2829	18	NA	NA	3675	-885	intron_retention	FALSE	canonical	3	199	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACCGTGTCTTGCTATT	NA	False	NA	NA	False	CATAAA	-20	NA	57190685	57199273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57195760_57197171
ES.10850.78	chr14	+	7017	1	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	3975	193	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTGCATCACCCCATC	NA	False	NA	32	True	ATTAAA	-26	NA	57190985	57198002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57191000_57198000
ES.10850.79	chr14	+	5319	2	NIC	ENSMUSG00000021945.10	novel	2829	18	NA	NA	4065	-3	intron_retention	FALSE	canonical	3	199	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTTTTTTGTTTGTT	NA	False	NA	18	True	AATAAA	-14	NA	57191075	57197806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57195760_57197171
ES.10850.8	chr14	+	5061	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-98	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	41.0991348922199	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTGACTTTCTGCAT	NA	False	NA	23	True	ATTAAA	-17	NA	57124011	57197993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179669_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.80	chr14	+	3523	4	ISM	ENSMUSG00000021945.10	ENSMUST00000224922.2	2829	18	33011	7	4222	-7	3prime_fragment	FALSE	canonical	3	170	junction_1	11.8602979164381	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGCTGGGTTTTTTGTT	NA	False	NA	14	True	AATAAA	-10	NA	57191232	57197802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57193752_57194308_57194561_57195638_57195760_57197171
ES.10850.81	chr14	+	8784	2	ISM	ENSMUSG00000021945.10	ENSMUST00000224922.2	2829	18	36617	-7225	7828	4876	3prime_fragment	FALSE	canonical	3	199	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATTTTCTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	57194838	57205034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57195760_57197171
ES.10850.9	chr14	+	5625	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-97	833	combination_of_known_junctions	FALSE	canonical	2	100	junction_12	26.7082683306541	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTATTTAGCTGACT	NA	False	NA	NA	False	AGTAAA	-16	NA	57124012	57198642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ES.10851.1	chr14	-	3369	2	Antisense	novelGene_ENSMUSG00000021945.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57139256	57133747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57133832_57135971
ES.10851.2	chr14	-	178	1	Intergenic	novelGene_9073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57134550	57134372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57134400_57134600
ES.10851.3	chr14	-	3411	1	Intergenic	novelGene_9074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAAAGAGTTTAAGCTA	NA	False	NA	NA	False	NA	NA	NA	57139256	57135845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57135800_57139300
ES.10852.1	chr14	-	515	1	Intergenic	novelGene_9075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57146522	57146007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57146000_57146500
ES.10853.1	chr14	-	5082	4	Antisense	novelGene_ENSMUSG00000021945.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGGGGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	57180828	57170334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57175132_57175860_57175897_57179454_57179582_57180706
ES.10853.2	chr14	-	6427	1	Antisense	novelGene_ENSMUSG00000021945.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCATGGTGATCATA	NA	False	NA	NA	False	NA	NA	NA	57182412	57175985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57176000_57182400
ES.10854.1	chr14	+	834	4	Intergenic	novelGene_9077	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTTTCATGTTGAATT	NA	False	NA	NA	False	AATAAA	-13	NA	57235203	57242443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57235231_57240305_57240393_57241366_57241670_57242026
ES.10855.1	chr14	-	4277	1	Intergenic	novelGene_9078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	57292735	57288458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57288500_57292700
ES.10855.2	chr14	-	4798	1	Genic_Genomic	ENSMUSG00000048582.8	novel	NA	NA	NA	NA	-15	-16097	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCAGCATGGTGTCACAC	NA	False	NA	NA	False	AATACA	-44	NA	57295195	57290397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_57290400_57295200
ES.10856.1	chr14	-	2399	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	0	7	0	-7	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGACCAATGGTAAGTT	NA	False	NA	NA	False	ATTAAA	-29	NA	57342159	57336063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57338229_57341925
ES.10856.2	chr14	-	2330	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	-40	116	-40	-116	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGTCACTGATATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	57342199	57336172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57338229_57341925
ES.10857.1	chr14	+	185	1	Intergenic	novelGene_9082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57628439	57628624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57628400_57628600
ES.10858.1	chr14	-	1464	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	-3	36	-3	-36	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGCTTATTCTGAATAA	NA	False	NA	1	True	AATAAA	-19	NA	57635989	57512485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
ES.10858.2	chr14	-	1250	6	NNC	ENSMUSG00000021947.12	novel	1497	8	NA	NA	35585	-42	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	9.57914401186244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGGTGCTTATTCT	NA	False	NA	-5	True	AATAAA	-13	NA	57600328	57512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600176
ES.10858.3	chr14	-	1925	1	Intergenic	novelGene_9079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57555930	57554005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57554000_57555900
ES.10858.4	chr14	-	5367	4	FSM	ENSMUSG00000021947.12	ENSMUST00000225765.2	899	4	26	-4494	-14	4494	multi-exon	FALSE	canonical	0	0	junction_1	10.3387082795139	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAGTAGTCTTGATAGC	NA	False	NA	NA	False	AATAAA	-28	NA	57635927	57574586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57579656_57600378_57600506_57620214_57620323_57635864
ES.10858.5	chr14	-	1580	1	Intergenic	novelGene_9080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAAAAGAACACT	NA	False	NA	NA	False	AATAAA	-12	NA	57579021	57577441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57577400_57579000
ES.10858.6	chr14	-	6074	1	Intergenic	novelGene_9081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACCTGTCATAAGA	NA	False	NA	NA	False	NA	NA	NA	57610826	57604752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57604800_57610800
ES.10859.1	chr14	-	6426	3	Intergenic	novelGene_9083	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTTGTGTATGCCTGT	3751	False	NA	NA	False	AATAAA	-13	NA	57661475	57654738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57656653_57656764_57659024_57659222
ES.10859.2	chr14	-	168	1	Intergenic	novelGene_9084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCTTTTTTAAAAAA	6014	False	NA	NA	False	NA	NA	NA	57659212	57659044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57659000_57659200
ES.1086.1	chr1	+	177	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	94105369	94105546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_94105400_94105500
ES.10860.1	chr14	+	3161	26	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_3	13.7506945279139	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661495	57755393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674633_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10860.10	chr14	+	5174	23	ISM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	15	18778	-3	11547	5prime_fragment	FALSE	canonical	3	32	junction_12	10.5282971710678	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAGTTAGTTCTTTCC	NA	False	NA	NA	False	AATAAA	-12	NA	57661533	57736615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629
ES.10860.12	chr14	+	2881	25	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	0	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	14.1710164890643	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGGTTTGTGCTGTCAT	NA	False	NA	-39	True	NA	NA	NA	57661562	57755341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754793
ES.10860.13	chr14	+	4954	23	ISM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	44	18969	0	11356	5prime_fragment	FALSE	canonical	3	32	junction_12	10.5282971710678	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTTCTGAGACG	NA	False	NA	NA	False	AATAAA	-18	NA	57661562	57736424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629
ES.10860.14	chr14	+	2584	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	45	459	1	-459	multi-exon	FALSE	canonical	3	32	junction_12	10.0195009855781	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTGTCAG	NA	False	NA	NA	False	TATAAA	-14	NA	57661563	57754934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10860.15	chr14	+	2980	26	NNC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	18.9420167880825	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661563	57755393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57694705_57694754_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754793
ES.10860.16	chr14	+	4817	28	NNC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	1	2230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	16.1263869683494	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCAGGAATTTGGTC	NA	False	NA	NA	False	NA	NA	NA	57661563	57757623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793_57755776_57755872_57757147_57757505
ES.10860.17	chr14	+	181	1	Intergenic	novelGene_9086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57714394	57714575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57714400_57714600
ES.10860.18	chr14	+	177	2	Antisense	novelGene_ENSMUSG00000086486.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTTTTTAAGAATCA	NA	False	NA	NA	False	NA	NA	NA	57714396	57754322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57714555_57754303
ES.10860.2	chr14	+	3107	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	-18	-1	-18	1	multi-exon	FALSE	canonical	3	32	junction_12	10.0195009855781	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGCTAATGACTTCC	NA	False	NA	14	True	AATAAA	-16	NA	57661500	57755394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10860.3	chr14	+	3503	26	NNC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.5772856644265	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCTGAGGCTAATGACT	NA	False	NA	11	True	AATAAA	-13	NA	57661514	57755391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674633_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713950_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10860.4	chr14	+	1678	15	NNC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	2	-10011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	16.8712108368677	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTGATTCTCAGTCAT	NA	False	NA	NA	False	NA	NA	NA	57661520	57705415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57705069
ES.10860.5	chr14	+	5031	23	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	-9	11348	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	14.6061942028343	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGAATGGTTTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	57661527	57736416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57661645_57667994_57668091_57672251_57672315_57674633_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629
ES.10860.6	chr14	+	3615	23	ISM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	9	20343	-9	9982	5prime_fragment	FALSE	canonical	3	32	junction_12	10.5282971710678	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCACTATGTAGCCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	57661527	57735050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629
ES.10860.8	chr14	+	2114	16	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.4751127418369	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGAGGCTAATGACTT	NA	False	NA	12	True	AATAAA	-14	NA	57661529	57755392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57661645_57667994_57668091_57672251_57672315_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10860.9	chr14	+	3010	25	NIC	ENSMUSG00000040040.17	novel	3088	26	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.1563074870062	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCTGAGGCTAATGACTT	NA	False	NA	12	True	AATAAA	-14	NA	57661532	57755392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_57661645_57667994_57668091_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ES.10861.1	chr14	-	156	1	Intergenic	novelGene_9085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	57689050	57688894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57688900_57689000
ES.10862.1	chr14	-	153	1	Intergenic	novelGene_9087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAATAATTTAA	NA	False	NA	NA	False	NA	NA	NA	57722962	57722809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57722800_57723000
ES.10863.1	chr14	-	197	1	Intergenic	novelGene_9088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTGTAAGG	7115	False	NA	NA	False	NA	NA	NA	57738979	57738782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57738800_57739000
ES.10864.1	chr14	+	1269	3	FSM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	3	2	3	-2	multi-exon	FALSE	canonical	3	15	junction_1	7	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAAAGCCACTGGT	NA	False	NA	8	True	ATTAAA	-20	NA	57762236	57780621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_57762379_57762760_57763057_57779790
ES.10864.2	chr14	+	1258	3	NNC	ENSMUSG00000050222.12	novel	1274	3	NA	NA	340	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGTCTTAATTT	NA	False	NA	16	True	ATTAAA	-28	NA	57762573	57780629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_57762602_57762665_57763057_57779790
ES.10864.3	chr14	+	1316	2	ISM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	346	-6	346	6	3prime_fragment	FALSE	canonical	3	29	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGTCTTAATTT	NA	False	NA	16	True	ATTAAA	-28	NA	57762579	57780629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_57763057_57779790
ES.10865.1	chr14	-	1598	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTTGACTCGCACAT	NA	False	NA	NA	False	AGTAAA	-17	NA	57762940	57761342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57761300_57762900
ES.10865.2	chr14	-	1497	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGCAAAATATTTT	NA	False	NA	-1	True	AATAAA	-33	NA	57763068	57761571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57761600_57763100
ES.10865.3	chr14	-	1337	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAGGACTCTATTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	57763068	57761731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_57761700_57763100
ES.10866.1	chr14	-	1847	1	Intergenic	novelGene_9089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTGGGAAGGAAGTCC	NA	False	NA	NA	False	NA	NA	NA	57775910	57774063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57774100_57775900
ES.10867.1	chr14	-	178	1	Intergenic	novelGene_9090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGGGGGGGACTACA	NA	False	NA	NA	False	NA	NA	NA	57785757	57785579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57785600_57785800
ES.10868.2	chr14	-	871	5	FSM	ENSMUSG00000021951.8	ENSMUST00000239099.2	880	5	9	0	9	0	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809060	57787053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ES.10868.3	chr14	-	2505	5	NIC	ENSMUSG00000021951.8	novel	880	5	NA	NA	12	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	107.459294618939	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809014	57787053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57807319
ES.10868.4	chr14	-	207	1	Intergenic	novelGene_9091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAAAGTGCACCAAG	NA	False	NA	NA	False	NA	NA	NA	57804693	57804486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57804500_57804700
ES.10869.1	chr14	+	4816	23	Antisense	novelGene_ENSMUSG00000114942.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCGCCATGCGCTGCATT	NA	False	NA	NA	False	NA	NA	NA	57818388	57902427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819929_57822056_57822149_57823323_57823441_57824036_57824168_57825409_57825529_57827397_57827581_57828244_57828535_57831282_57831466_57834435_57834602_57835342_57835505_57839947_57840129_57841046_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851298_57855580_57855701_57866813_57866967_57867671_57867790_57875675_57875815_57880538_57880681_57885876_57885989_57902350
ES.10869.10	chr14	+	4319	2	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	57818392	57823885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57822156_57823329
ES.10869.11	chr14	+	3459	11	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAGGAAGAACAGGTT	NA	False	NA	NA	False	NA	NA	NA	57818392	57836102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819639_57819754_57819928_57822059_57822156_57823329_57823442_57824036_57824168_57825409_57825529_57827397_57827581_57828244_57828535_57831282_57831466_57834435_57834602_57835342
ES.10869.12	chr14	+	10310	18	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCCCCCCCCCATTGTC	NA	False	NA	NA	False	NA	NA	NA	57818392	57873053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819925_57822055_57822156_57823329_57823442_57824036_57824168_57825409_57825529_57827397_57827581_57828244_57828535_57831282_57831466_57834435_57834602_57835342_57835505_57839947_57840123_57841041_57841188_57841818_57841964_57842579_57842757_57850729_57850905_57851143_57851298_57855580_57855701_57866813
ES.10869.14	chr14	+	6111	8	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGAAGAACAGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	57818392	57836105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819925_57822055_57822156_57823329_57823442_57824036_57824168_57825409_57828535_57831282_57831466_57834436_57834602_57835342
ES.10869.15	chr14	+	4026	8	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57821914	57836075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57822156_57823329_57823442_57824036_57824168_57825409_57827581_57828244_57828535_57831282_57831466_57834435_57834602_57835343
ES.10869.17	chr14	+	3342	2	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5813	False	NA	NA	False	NA	NA	NA	57832207	57836075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57833672_57834197
ES.10869.18	chr14	+	6723	4	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCCCCCCCCCATTGTC	NA	False	NA	NA	False	NA	NA	NA	57850695	57873053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57850905_57851143_57851298_57855580_57855701_57866813
ES.10869.19	chr14	+	2473	1	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTGGGACCAAGGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	57850695	57853168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57850700_57853200
ES.10869.2	chr14	+	3956	2	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGCTATATTATACATA	NA	False	NA	NA	False	TTTAAA	-28	NA	57818389	57823519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57822156_57823329
ES.10869.20	chr14	+	178	1	Intergenic	novelGene_9093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	870	False	NA	NA	False	NA	NA	NA	57890864	57891042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57890900_57891000
ES.10869.21	chr14	+	219	1	Intergenic	novelGene_9094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTCTTTATTTGTTG	6514	False	NA	NA	False	AAGAAA	-7	NA	57896508	57896727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57896500_57896700
ES.10869.22	chr14	+	158	1	Intergenic	novelGene_9095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	8019	False	NA	NA	False	NA	NA	NA	57898013	57898171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57898000_57898200
ES.10869.23	chr14	+	3083	1	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTTAAATAATTAGTT	NA	False	NA	NA	False	NA	NA	NA	57902024	57905107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57902000_57905100
ES.10869.24	chr14	+	2127	1	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	57902527	57904654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57902500_57904700
ES.10869.3	chr14	+	3581	10	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGAAGAACAGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	57818390	57836105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819925_57822055_57822156_57823329_57823442_57824036_57824168_57825409_57825529_57827397_57827581_57828244_57828535_57831282_57831466_57834435_57834602_57835342
ES.10869.4	chr14	+	1802	3	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-8	NA	57818392	57823499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819925_57822055_57822156_57823329
ES.10869.5	chr14	+	5493	1	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	57818392	57823885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57818400_57823900
ES.10869.6	chr14	+	4802	23	Antisense	novelGene_ENSMUSG00000114942.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCGCCATGCGCTGCATT	NA	False	NA	NA	False	NA	NA	NA	57818392	57902427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819921_57822056_57822156_57823329_57823442_57824036_57824167_57825407_57825529_57827397_57827581_57828244_57828535_57831282_57831466_57834437_57834602_57835342_57835505_57839947_57840121_57841040_57841189_57841818_57841964_57842579_57842757_57850729_57850905_57851143_57851298_57855580_57855701_57866813_57866967_57867671_57867794_57875680_57875815_57880538_57880677_57885874_57885989_57902350
ES.10869.7	chr14	+	2236	3	Antisense	novelGene_ENSMUSG00000021952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAATTAAAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	57818392	57823933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_57819925_57822055_57822156_57823329
ES.1087.1	chr1	+	2608	2	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCCAAGCAG	1949	False	NA	NA	False	NA	NA	NA	94153450	94161735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_94156000_94161676
ES.10870.1	chr14	-	5615	1	Genic_Genomic	ENSMUSG00000021952.17	novel	NA	NA	NA	NA	66932	1410	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTCTCCAGGCTACTT	7012	False	NA	NA	False	NA	NA	NA	57819182	57813567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_57813600_57819200
ES.10870.12	chr14	-	8377	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	10	-253	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGACTTTTAAGTTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	57902682	57815230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.13	chr14	-	6292	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	194	2194	-1	-2194	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATTTGATTTTTTCA	NA	False	NA	NA	False	AATACA	-17	NA	57902693	57817171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.14	chr14	-	5075	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	194	3411	-1	1339	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCCTCTTAATTTTTG	NA	False	NA	NA	False	NA	NA	NA	57902693	57818388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.15	chr14	-	4620	22	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-4	1338	combination_of_known_splicesites	FALSE	canonical	2	23	junction_10	77.2766329787676	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGCTCCTCTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	57902417	57818389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.16	chr14	-	4284	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	194	4202	-1	548	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTGTGCTTTCCAAC	NA	False	NA	NA	False	AATACA	-22	NA	57902693	57819179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.17	chr14	-	4434	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	4	548	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTGTGCTTTCCAAC	NA	False	NA	NA	False	AATACA	-22	NA	57902688	57819179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.18	chr14	-	3943	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	8	61	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGAGTCTTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	57902684	57819666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.19	chr14	-	3796	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	175	4709	-20	41	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACTGAATTGCTGAAAG	NA	False	NA	NA	False	AATAAA	-41	NA	57902712	57819686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.2	chr14	-	8488	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	195	-3	0	3	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTGACCATGTGTGA	NA	False	NA	-15	True	ACTAAA	-16	NA	57902692	57814974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.20	chr14	-	1173	1	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	65252	38	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCACTGAATTGCTGA	5332	False	NA	NA	False	AATAAA	-38	NA	57820862	57819689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819700_57820900
ES.10870.21	chr14	-	3492	23	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	3	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	79.634093471171	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCACTGAATTGCTGA	NA	False	NA	NA	False	AATAAA	-38	NA	57902418	57819689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866961_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.23	chr14	-	6120	22	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	0	27	intron_retention	FALSE	canonical	2	4	junction_13	116.460050277585	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCTGCAAAGTGCAC	NA	False	NA	NA	False	AATAAA	-27	NA	57902421	57819700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57831460_57834431_57834602_57835342_57835503_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850809_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.24	chr14	-	3335	22	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	3	27	combination_of_known_splicesites	FALSE	canonical	2	23	junction_10	77.2766329787676	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCTGCAAAGTGCAC	NA	False	NA	NA	False	AATAAA	-27	NA	57902443	57819700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.25	chr14	-	4027	20	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	5167	27	intron_retention	FALSE	canonical	2	23	junction_9	93.8601836351398	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCTGCAAAGTGCAC	9383	False	NA	NA	False	AATAAA	-27	NA	57880947	57819700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57835503_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791
ES.10870.26	chr14	-	3626	23	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	1	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	74.741551942523	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902420	57819701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855838_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.27	chr14	-	3490	23	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-3	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	74.741551942523	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTTCTGCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	57902427	57819701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855694_57866812_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.28	chr14	-	4306	23	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	2	25	intron_retention	FALSE	canonical	2	67	junction_21	80.5608952981512	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCTTTCTGCAAAGTGC	NA	False	NA	NA	False	AATAAA	-25	NA	57902419	57819702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.29	chr14	-	3811	23	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-3	24	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	90.7318271766304	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCCTTTCTGCAAAGTG	NA	False	NA	NA	False	AATAAA	-24	NA	57902695	57819703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57902344
ES.10870.3	chr14	-	8507	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-109	1	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTTGACCATGTGT	NA	False	NA	-17	True	ACTAAA	-14	NA	57902558	57814976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.31	chr14	-	3569	24	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-1	20	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	99.5980200378659	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGATCCTTTCTGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	57902447	57819707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850809_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.32	chr14	-	3544	22	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	63	14	combination_of_known_splicesites	TRUE	canonical	1	2	junction_20	80.642347489497	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTAACTTAGATCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	57902629	57819713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57885875_57885982_57902344
ES.10870.33	chr14	-	3515	23	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	20	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	101.229344388321	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGCTTAACTTAGATCC	NA	False	NA	NA	False	AATAAA	-11	NA	57902393	57819716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819926_57822056_57822150_57823323_57823486_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.34	chr14	-	3394	22	NNC	ENSMUSG00000021952.17	novel	2323	16	NA	NA	3	-2459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.2774587235539	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTTATGGATGTATC	NA	False	NA	NA	False	NA	NA	NA	57902418	57822186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57822411_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.35	chr14	-	3578	8	NNC	ENSMUSG00000021952.17	novel	1765	4	NA	NA	-31	-21784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.424180258721	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTAATTGTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	57902480	57856230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57856475_57857252_57857392_57864412_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.36	chr14	-	2728	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	-22	-1999	3	1999	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTAGTTCTTGCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	57902443	57877236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
ES.10870.37	chr14	-	2883	5	FSM	ENSMUSG00000021952.17	ENSMUST00000172524.2	1078	5	444	-2249	3	1999	multi-exon	FALSE	canonical	3	7	junction_1	126.317061397105	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTAGTTCTTGCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	57902443	57877236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57879618_57880538_57880681_57880791_57880947_57885875_57885982_57902344
ES.10870.38	chr14	-	1674	3	FSM	ENSMUSG00000021952.17	ENSMUST00000173940.8	1893	3	-1	220	-1	24	multi-exon	FALSE	canonical	3	257	junction_1	39	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATCTGCTACAGGAGC	NA	False	NA	NA	False	NA	NA	NA	57902693	57879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57880681_57885875_57885982_57902344
ES.10870.39	chr14	-	6557	2	FSM	ENSMUSG00000021952.17	ENSMUST00000173638.2	665	2	25	-5917	0	-16	multi-exon	FALSE	canonical	3	335	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAGAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57902421	57879501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57885982_57902344
ES.10870.4	chr14	-	8376	24	NNC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.8880491741756	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTTGACCATGTGT	NA	False	NA	-17	True	ACTAAA	-14	NA	57902698	57814976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57819639_57819754_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10870.40	chr14	-	3098	1	Intergenic	novelGene_9092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAACTTAA	NA	False	NA	NA	False	NA	NA	NA	57890335	57887237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57887200_57890300
ES.10870.41	chr14	-	5413	1	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	-20	-11881	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGATGGAAGAGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	57902712	57897299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57897300_57902700
ES.10870.7	chr14	-	7932	21	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	82.628445465227	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTTTGACCATGTG	NA	False	NA	-18	True	ACTAAA	-13	NA	57902420	57814977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57885875_57885982_57902344
ES.10870.9	chr14	-	8102	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	328	250	-110	-250	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTTAAGTTTTTTT	NA	False	NA	-1	True	ATTAAA	-16	NA	57902559	57815227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ES.10871.1	chr14	-	385	1	Intergenic	novelGene_9096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	57903810	57903425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57903400_57903800
ES.10871.2	chr14	-	216	1	Intergenic	novelGene_9097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTCAATAGAAACAATAGT	NA	False	NA	NA	False	NA	NA	NA	57903811	57903595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57903600_57903800
ES.10872.1	chr14	+	5299	1	Intergenic	novelGene_9098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCAAATGAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	57906996	57912295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57907000_57912300
ES.10873.1	chr14	+	203	1	Intergenic	novelGene_9099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTTCTAGTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	57914651	57914854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_57914700_57914900
ES.10874.1	chr14	-	189	1	Intergenic	novelGene_9100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTATTAAAAAAAAAAAAAA	8716	False	NA	NA	False	NA	NA	NA	57916758	57916569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_57916600_57916800
ES.10875.1	chr14	-	5397	9	FSM	ENSMUSG00000021959.17	ENSMUST00000174213.8	4001	9	40	-1436	24	0	multi-exon	FALSE	canonical	0	0	junction_6	9.18898797474455	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	57983538	57927118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57962030_57962279_57971334_57971876_57983346
ES.10875.2	chr14	-	5204	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	-13	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	57983593	57927118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ES.10875.3	chr14	-	5235	8	NNC	ENSMUSG00000021959.17	novel	5191	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	7.14856914468389	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTCATTTGTGGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	57983581	57927119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_57929228_57931770_57931922_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ES.10875.5	chr14	-	5099	8	NIC	ENSMUSG00000021959.17	novel	5191	8	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	8.49969987465344	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCTCTTCATTTGTGGT	NA	False	NA	NA	False	ATTAAA	-11	NA	57983530	57927121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936753_57938016_57940378_57940512_57971334_57971876_57983346
ES.10875.6	chr14	-	4276	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	-8	923	-8	513	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAAGTGTGATTTTTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	57983588	57928041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ES.10876.1	chr14	-	181	1	Intergenic	novelGene_9101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	58011259	58011078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58011100_58011300
ES.10877.1	chr14	-	159	1	Intergenic	novelGene_9102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	58014814	58014655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58014700_58014800
ES.10878.1	chr14	+	170	1	Intergenic	novelGene_9103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58019138	58019308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58019100_58019300
ES.10879.1	chr14	+	183	1	Intergenic	novelGene_9104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAAAATGAATGGC	NA	False	NA	NA	False	NA	NA	NA	58020489	58020672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58020500_58020700
ES.1088.1	chr1	+	1343	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	10	759	5	-759	multi-exon	FALSE	canonical	3	133	junction_2	1	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACATGTGTTTTATA	NA	False	NA	54	True	AATAAA	-15	NA	95241357	95262250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95241976_95252833_95252969_95261660
ES.1088.2	chr1	+	1161	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	25	926	20	-926	multi-exon	FALSE	canonical	3	133	junction_2	1	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTCCCGTTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	95241372	95262083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95241976_95252833_95252969_95261660
ES.1088.3	chr1	+	1859	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	26	227	21	-227	multi-exon	FALSE	canonical	3	133	junction_2	1	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTACCTCAAAAGC	NA	False	NA	NA	False	AGTAAA	-9	NA	95241373	95262782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95241976_95252833_95252969_95261660
ES.1088.4	chr1	+	2080	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	30	2	25	-2	multi-exon	FALSE	canonical	3	133	junction_2	1	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAACAGCGTTCTAGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	95241377	95263007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95241976_95252833_95252969_95261660
ES.1088.5	chr1	+	7923	1	FSM	ENSMUSG00000103973.2	ENSMUST00000193380.2	2538	1	-5361	-24	-5361	24	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCTTCAGAGAAAATA	NA	False	NA	NA	False	ACTAAA	-44	NA	95251044	95258967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95251000_95259000
ES.10880.1	chr14	+	860	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	-33	4298	-33	5	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTAATGGAGGCTTGA	NA	False	NA	9	True	TATAAA	-41	NA	58035603	58039797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ES.10880.11	chr14	+	601	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	38	4486	0	5	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCCATTAAGCCTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	58035674	58039609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ES.10880.12	chr14	+	3798	2	FSM	ENSMUSG00000021963.18	ENSMUST00000131455.2	453	2	-43	-3302	3	4	multi-exon	FALSE	canonical	3	2836	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCCATTAAGCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	58035677	58039608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944
ES.10880.13	chr14	+	2958	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	8	-387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1278.09944350978	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGGTTTTTCTGTACTG	NA	False	NA	NA	False	AGTAAA	-18	NA	58035682	58042039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378_58040732_58040796
ES.10880.14	chr14	+	5108	2	FSM	ENSMUSG00000021963.18	ENSMUST00000131455.2	453	2	-32	-4623	14	1137	multi-exon	FALSE	canonical	3	2836	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAGTGACTGCCTATC	NA	False	NA	NA	False	NA	NA	NA	58035688	58040929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944
ES.10880.15	chr14	+	1802	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	-5	1124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1278.09944350978	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAGCAGA	NA	False	NA	NA	False	NA	NA	NA	58035715	58040916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378_58040732_58040796
ES.10880.16	chr14	+	740	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	2	11080	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1278.09944350978	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTTAAAATCGGGGG	NA	False	NA	NA	False	AAAAAG	-14	NA	58035722	58055175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378_58039769_58055147
ES.10880.17	chr14	+	568	1	Antisense	novelGene_ENSMUSG00000021965.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8718	False	NA	NA	False	NA	NA	NA	58045403	58045971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_58045400_58046000
ES.10880.18	chr14	+	2162	2	Antisense	novelGene_ENSMUSG00000021965.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTTAAAATCGGGGG	NA	False	NA	NA	False	AAAAAG	-14	NA	58048034	58055175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_58049123_58054101
ES.10880.19	chr14	+	3172	1	Intergenic	novelGene_9105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCGAGTTACTAACCTTT	NA	False	NA	NA	False	AATAAA	-2	NA	58054422	58057594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58054400_58057600
ES.10880.3	chr14	+	3516	3	NIC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	19	5	intron_retention	FALSE	canonical	3	2836	junction_1	140.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCCATTAAGCCTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	58035655	58039609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_58035812_58035944_58039074_58039378
ES.10880.4	chr14	+	3679	3	NIC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	-4	3	intron_retention	FALSE	canonical	3	2836	junction_1	140.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGTGTAAAAGTTAAT	NA	False	NA	-1	True	TATAAA	-31	NA	58035670	58039787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_58035812_58035944_58039074_58039378
ES.10880.5	chr14	+	1925	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	34	3166	-4	1137	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGAGTGACTGCCTATC	NA	False	NA	NA	False	NA	NA	NA	58035670	58040929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ES.10880.6	chr14	+	875	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	-1	-16	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1484.07974431969	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATGTGTTCAATCAG	NA	False	NA	-20	True	TATAAA	-12	NA	58035673	58039768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58035812_58035944_58036055_58038016_58038131_58038950_58039074_58039378
ES.10880.7	chr14	+	3430	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	37	1658	-1	11	multi-exon	FALSE	canonical	3	2836	junction_1	125.222468697381	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCGCAGTTTTAATCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	58035673	58042437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ES.10880.9	chr14	+	472	3	NIC	ENSMUSG00000021963.18	novel	459	3	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	52	junction_2	1392	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGACTTTGCCATTAAG	NA	False	NA	NA	False	AATAAA	-20	NA	58035674	58039603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_58035812_58035944_58036055_58039378
ES.10881.1	chr14	+	764	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	-234	2347	-234	1	multi-exon	FALSE	canonical	3	956	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTCTCATACGGAAT	NA	False	NA	26	True	ATTAAA	-18	NA	58063456	58064406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063780_58063965
ES.10881.10	chr14	+	2813	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-158	-2136	38	-212	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACATGCATTCTTAATG	NA	False	NA	NA	False	AATAAA	-21	NA	58063728	58066541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063700_58066500
ES.10881.12	chr14	+	2242	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	600	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATAGTCACTGTCCTCC	NA	False	NA	NA	False	AATAAA	-25	NA	58064486	58066766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58065509_58065546
ES.10881.2	chr14	+	533	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_1	0	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTCATACGGAATAC	NA	False	NA	28	True	ATTAAA	-20	NA	58063680	58064408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_58063771_58063965
ES.10881.3	chr14	+	2878	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	2	-3	2	3	multi-exon	FALSE	canonical	3	956	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGACCTACAAATAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	58063692	58066756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063780_58063965
ES.10881.4	chr14	+	1558	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	6	1313	6	1035	multi-exon	FALSE	canonical	3	956	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTTTTTGGTTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	58063696	58065440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063780_58063965
ES.10881.5	chr14	+	703	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-184	0	12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGTCTCATACGGAA	NA	False	NA	25	True	ATTAAA	-17	NA	58063702	58064405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063700_58064400
ES.10881.6	chr14	+	2643	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	12	222	12	-222	multi-exon	FALSE	canonical	3	956	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGTCAGTATACATGC	NA	False	NA	NA	False	AATAAA	-11	NA	58063702	58066531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063780_58063965
ES.10881.7	chr14	+	2315	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	12	550	12	-550	multi-exon	FALSE	canonical	3	956	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATAATGTAATTT	NA	False	NA	NA	False	AGTAAA	-21	NA	58063702	58066203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063780_58063965
ES.10881.8	chr14	+	3046	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-177	-2350	19	2	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCTGACCTACAAATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	58063709	58066755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063700_58066800
ES.10881.9	chr14	+	1714	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	-166	-1029	30	1029	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCGTTTTTGGTTT	NA	False	NA	NA	False	TTTAAA	-9	NA	58063720	58065434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58063700_58065400
ES.10882.1	chr14	-	5172	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-27	-2885	-5	2885	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTTGGGTTTTTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	58063647	58041132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.10	chr14	-	2196	8	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.9039716027899	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063631	58044017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58044989_58045431_58045536_58047399_58047601_58054090_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.11	chr14	-	5564	7	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	189	junction_2	23.185843381972	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063624	58044017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044989_58045431_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.13	chr14	-	4422	8	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_2	78.7416338283578	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063624	58044017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58044989_58045431_58046258_58047399_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.14	chr14	-	3735	8	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	155	junction_3	30.2884095835691	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTTATGTTGCCAAC	NA	False	NA	-9	True	AATAAA	-17	NA	58063624	58044019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58059659_58060357_58060420_58063466
ES.10882.15	chr14	-	2441	11	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	103.744349243706	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTTATGTTGCCAAC	NA	False	NA	-9	True	AATAAA	-17	NA	58063597	58044019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58053870_58054006_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58060531_58060603_58063466
ES.10882.16	chr14	-	6749	1	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-3017	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTTATGTTGCCAAC	NA	False	NA	-9	True	AATAAA	-17	NA	58050768	58044019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044000_58050800
ES.10882.18	chr14	-	1945	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-37	352	-15	-352	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGGCAGCTTTAGGAAA	NA	False	NA	NA	False	NA	NA	NA	58063657	58044369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.19	chr14	-	2056	1	Intergenic	novelGene_9106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTATTAATGAAGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	58056630	58054574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58054600_58056600
ES.10882.2	chr14	-	4690	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-24	-2406	-2	2406	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTCTTATCTTACACATA	NA	False	NA	NA	False	ATTAAA	-20	NA	58063644	58041611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.3	chr14	-	4580	9	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-6	2402	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	72.2253418129676	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGTGGTCTTATCTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	58063626	58041615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58044989_58045431_58045536_58047399_58047513_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.4	chr14	-	5065	3	FSM	ENSMUSG00000021965.4	ENSMUST00000224108.2	518	3	-1236	-3311	-1236	2402	multi-exon	FALSE	canonical	3	200	junction_2	26.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGTGGTCTTATCTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	58048987	58041615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58044989_58045431_58045536_58047399
ES.10882.5	chr14	-	2373	10	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-5	19	combination_of_known_junctions	TRUE	canonical	0	0	junction_9	88.6964583757157	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATTTCTTTCAGCCCT	NA	False	NA	12	True	AATAAA	-38	NA	58063647	58043998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58060531_58060599_58063466
ES.10882.6	chr14	-	2304	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	-37	-7	-15	7	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGCCAACTCTGAAATT	NA	False	NA	0	True	AATAAA	-26	NA	58063657	58044010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.7	chr14	-	2309	9	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	7	6	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	72.8590248356372	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTGCCAACTCTGAAAT	NA	False	NA	-1	True	AATAAA	-25	NA	58063607	58044011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044989_58045431_58045536_58047399_58047601_58048980_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.8	chr14	-	3730	8	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-7	5	intron_retention	FALSE	canonical	3	189	junction_3	22.2288652202399	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTGCCAACTCTGAAA	NA	False	NA	-2	True	AATAAA	-24	NA	58063649	58044012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58044989_58045431_58045536_58047399_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10882.9	chr14	-	3859	9	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	-5	1	intron_retention	FALSE	canonical	1	1	junction_4	95.6862548906581	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGTTGCCAACTCT	NA	False	NA	-6	True	AATAAA	-20	NA	58063647	58044016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58044989_58045431_58045536_58047399_58049123_58053870_58054006_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ES.10883.1	chr14	+	186	1	Intergenic	novelGene_9107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTATGCAAACAGG	7960	False	NA	NA	False	NA	NA	NA	58093575	58093761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58093600_58093800
ES.10884.1	chr14	-	3326	1	Genic_Genomic	ENSMUSG00000021969.9	novel	NA	NA	NA	NA	4247	1114	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAATGAATTTCATGTC	NA	False	NA	NA	False	AATAAA	-19	NA	58072371	58069045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_58069000_58072400
ES.10884.11	chr14	-	5104	14	NIC	ENSMUSG00000021969.9	novel	2179	14	NA	NA	-2	-75	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	76.5916707199199	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTTGTTTTTTAAT	NA	False	NA	-17	True	AATAAA	-10	NA	58127681	58070234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.12	chr14	-	3910	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	17	-79	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	93.8518335818042	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATTGTCTTGTTTTT	NA	False	NA	-21	True	AATAAA	-6	NA	58127660	58070238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.13	chr14	-	2890	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-78	692	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	58127811	58072456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.14	chr14	-	2963	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-82	2305	-82	684	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127815	58072464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.15	chr14	-	1706	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-2	676	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	83.5355463261	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127681	58072472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
ES.10884.16	chr14	-	2025	15	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.1266965364394	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127733	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58073900_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.17	chr14	-	2859	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-32	672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.570282340357	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127765	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094108_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.18	chr14	-	1506	11	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	17	672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.567943228437	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127660	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58111349_58111454_58115889_58115917_58127519
ES.10884.19	chr14	-	1744	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	1	672	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	93.8518335818042	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127732	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.2	chr14	-	5130	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-77	-56	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGTTGCCATTATAT	NA	False	NA	2	True	AATAAA	-29	NA	58127810	58070215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.20	chr14	-	1732	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-32	672	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127765	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.21	chr14	-	2772	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-24	672	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	70.1463641017424	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127757	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58111349_58111454_58115889_58115917_58127519
ES.10884.22	chr14	-	1846	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-69	672	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.7296808576838	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127802	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.23	chr14	-	2904	14	NIC	ENSMUSG00000021969.9	novel	2179	14	NA	NA	10	672	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	76.5916707199199	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127723	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.24	chr14	-	2875	13	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-38	672	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	91.279333184827	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127771	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.25	chr14	-	4515	1	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-373	672	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58076991	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58072500_58077000
ES.10884.26	chr14	-	4523	11	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-39	672	intron_retention	FALSE	canonical	0	0	junction_10	72.8315865541868	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127772	58072476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58127500
ES.10884.27	chr14	-	4533	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-45	668	intron_retention	FALSE	canonical	3	200	junction_2	22.070510597096	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127778	58072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.28	chr14	-	2816	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-13	668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	69.4422883044523	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127692	58072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58127500
ES.10884.29	chr14	-	1496	9	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-24	668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.555255332578	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127757	58072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.3	chr14	-	5198	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-70	58	-70	-58	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTTGTTGCCATTAT	NA	False	NA	0	True	AATAAA	-27	NA	58127803	58070217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.30	chr14	-	2830	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	8	664	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	63.4039080463938	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127725	58072484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
ES.10884.31	chr14	-	2811	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	14	635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.3708641278508	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58127719	58072513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58096003_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.33	chr14	-	2639	11	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	2	635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	72.8099581101376	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58127675	58072513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58127523
ES.10884.34	chr14	-	2788	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-11	635	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	101.550856170142	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58127744	58072513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
ES.10884.35	chr14	-	2657	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	15	635	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	68.6591774246393	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58127662	58072513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58115889_58115917_58127519
ES.10884.36	chr14	-	4273	11	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-14	635	intron_retention	FALSE	canonical	1	3	junction_4	71.3680600829251	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58127693	58072513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.37	chr14	-	1826	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-39	3399	-39	152	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGATTCAGGTACCT	NA	False	NA	NA	False	AATAAA	-34	NA	58127772	58073558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.38	chr14	-	1759	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-49	152	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGATTCAGGTACCT	NA	False	NA	NA	False	AATAAA	-34	NA	58127782	58073558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.39	chr14	-	1633	11	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-27	152	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	88.7864854580921	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGATTCAGGTACCT	NA	False	NA	NA	False	AATAAA	-34	NA	58127760	58073558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58115889_58115917_58127519
ES.10884.4	chr14	-	6756	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-5	-58	intron_retention	FALSE	canonical	3	200	junction_2	22.070510597096	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTTGTTGCCATTAT	NA	False	NA	0	True	AATAAA	-27	NA	58127738	58070217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.40	chr14	-	3317	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	25	140	intron_retention	FALSE	canonical	3	200	junction_2	22.070510597096	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACACTCAAAGAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	58127652	58073570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.41	chr14	-	1712	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	8	140	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	101.550856170142	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACACTCAAAGAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	58127725	58073570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
ES.10884.42	chr14	-	2149	13	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	16	140	intron_retention	FALSE	canonical	3	16	junction_3	63.3996911138637	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACACTCAAAGAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	58127717	58073570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.43	chr14	-	1270	7	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-15418	140	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	90.0203680656032	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACACTCAAAGAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	58096181	58073570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58095996
ES.10884.44	chr14	-	4808	11	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	10	138	intron_retention	FALSE	canonical	3	203	junction_8	20.5243757517738	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATAACACTCAAAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	58127723	58073572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.45	chr14	-	3294	11	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	24	137	intron_retention	FALSE	canonical	3	34	junction_1	63.9637397280678	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAATAACACTCAAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	58127709	58073573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.46	chr14	-	1644	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	-47	3589	-47	-38	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTGTGGTGAAGTATA	NA	False	NA	NA	False	CATAAA	-29	NA	58127780	58073748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.47	chr14	-	3891	7	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-6712	-55	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	101.930804415981	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAACTAAAAAGTT	NA	False	NA	NA	False	CATAAA	-12	NA	58087475	58073765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377
ES.10884.48	chr14	-	1545	3	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	50002	618	-1059	-56	3prime_fragment	FALSE	canonical	3	200	junction_2	15.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACAAACTAAAAAGT	NA	False	NA	NA	False	CATAAA	-11	NA	58077677	58073766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_58074104_58075047_58075125_58076546
ES.10884.49	chr14	-	1425	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-14	-147	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTCACGTGTTAACATG	NA	False	NA	NA	False	NA	NA	NA	58127747	58073857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.5	chr14	-	5164	14	NNC	ENSMUSG00000021969.9	novel	2179	14	NA	NA	-27	-71	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	90.6940366508387	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTTTTTAATGGTT	NA	False	NA	-13	True	AATAAA	-14	NA	58127760	58070230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58074104_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127542
ES.10884.50	chr14	-	1428	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	58	3700	2	-149	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCGTCACGTGTTAACA	NA	False	NA	NA	False	NA	NA	NA	58127675	58073859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.51	chr14	-	3248	10	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	14	545	intron_retention	FALSE	canonical	3	203	junction_7	21.5767364435763	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	58127719	58076072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.52	chr14	-	2566	1	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-2020	545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	58078638	58076072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58076100_58078600
ES.10884.53	chr14	-	1586	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	10	513	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	82.7227771006249	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58127667	58076104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.54	chr14	-	2433	4	FSM	ENSMUSG00000021969.9	ENSMUST00000225955.2	2356	4	-64	-13	-8	13	multi-exon	FALSE	canonical	3	203	junction_1	20.4015249974658	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGCAAGAAAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	58127741	58101018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.6	chr14	-	3977	11	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	-59	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	92.301733461512	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127792	58070231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58127519
ES.10884.7	chr14	-	4059	14	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	8	-72	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	90.5715579008759	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127725	58070231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58077007_58077053_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.8	chr14	-	4012	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	10	-72	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.7296808576838	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127723	58070231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10884.9	chr14	-	3936	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	9	-72	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127724	58070231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ES.10885.1	chr14	+	174	1	Intergenic	novelGene_9108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	58129453	58129627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58129500_58129600
ES.10886.1	chr14	+	178	1	Intergenic	novelGene_9109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	58132280	58132458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58132300_58132500
ES.10887.1	chr14	+	224	1	Intergenic	novelGene_9110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTTAAAAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	58157629	58157853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58157600_58157900
ES.10888.1	chr14	+	208	1	Intergenic	novelGene_9113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATGAACAGTAGGGCC	NA	False	NA	NA	False	NA	NA	NA	58196286	58196494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58196300_58196500
ES.10888.2	chr14	+	357	1	Intergenic	novelGene_9114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58196288	58196645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58196300_58196600
ES.10889.1	chr14	+	1275	3	FSM	ENSMUSG00000097303.3	ENSMUST00000224786.2	907	3	-362	-6	-301	6	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTTACTGTTGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	58236478	58241160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_58236920_58239766_58239877_58240436
ES.1089.1	chr1	+	499	2	Genic_Genomic	ENSMUSG00000081051.5	novel	531	1	NA	NA	-36	62	multi-exon	FALSE	non_canonical	0	0	junction_1	0	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAACCAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	95426309	95426938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_95426544_95426673
ES.1089.2	chr1	+	629	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	-36	-62	-36	62	mono-exon	FALSE	NA	NA	NA	NA	NA	748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAACCAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	95426309	95426938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_95426300_95426900
ES.10890.1	chr14	-	2329	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	-1	1	-1	-1	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTCTCTCATCCATT	NA	False	NA	-2	True	NA	NA	NA	58236720	58153718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.10	chr14	-	1661	12	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	12	-647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	101.469288599682	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTGTGTACAAAGTG	NA	False	NA	NA	False	AATACA	-13	NA	58236707	58154364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169703_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.11	chr14	-	177	1	Intergenic	novelGene_9111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	58158119	58157942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58157900_58158100
ES.10890.12	chr14	-	1114	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	1	7511	1	174	5prime_fragment	FALSE	canonical	3	228	junction_1	35.692261065951	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTACGTGTCTTACT	NA	False	NA	NA	False	AAAACA	-45	NA	58236718	58161228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.13	chr14	-	910	9	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	4	7712	4	-27	5prime_fragment	FALSE	canonical	3	228	junction_1	35.692261065951	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACGTGAGAGAAAAGTT	NA	False	NA	-11	True	AATAAA	-13	NA	58236715	58161429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.14	chr14	-	3530	11	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	17	-29	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	144.949784408256	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAACGTGAGAGAAAAG	NA	False	NA	-13	True	AATAAA	-11	NA	58236702	58161431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58162450_58162485_58163116_58163317_58164430_58164641_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.15	chr14	-	1051	10	NNC	ENSMUSG00000021973.10	novel	637	8	NA	NA	-12	-1752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.507498730005	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58236731	58163154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58163332_58163491_58163579_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.16	chr14	-	961	8	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	16	10734	16	-3049	5prime_fragment	FALSE	canonical	3	276	junction_1	23.3168065864036	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58236703	58164451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.17	chr14	-	139	1	Intergenic	novelGene_9112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	58172263	58172124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58172100_58172300
ES.10890.18	chr14	-	134	1	Intergenic	novelGene_9115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58209006	58208872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_58208900_58209000
ES.10890.3	chr14	-	1966	8	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.893900182089	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTCTCTCATCCATT	NA	False	NA	-2	True	NA	NA	NA	58236701	58153718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161520_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.4	chr14	-	2242	11	NIC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	98.991716825197	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGGTCTCTCATCCA	NA	False	NA	-4	True	NA	NA	NA	58236701	58153720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.5	chr14	-	2141	11	NIC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	7	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	102.144994982623	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTACTTTGGTCTCT	NA	False	NA	-10	True	NA	NA	NA	58236712	58153726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_58154833_58156279_58156438_58156800_58156910_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.7	chr14	-	2241	12	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	14	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.264158279552	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTAGACTTGGGTGAT	NA	False	NA	-28	True	NA	NA	NA	58236705	58153744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58154833_58156326_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.8	chr14	-	1683	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	-1	647	-1	-647	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTGTGTACAAAGTG	NA	False	NA	NA	False	AATACA	-13	NA	58236720	58154364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10890.9	chr14	-	1637	12	NNC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	12	-647	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	100.818714647334	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTGTGTACAAAGTG	NA	False	NA	NA	False	AATACA	-13	NA	58236707	58154364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_58154833_58156312_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ES.10891.1	chr14	+	131	1	Intergenic	novelGene_9116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACCAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	58857043	58857174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_58857000_58857200
ES.10892.1	chr14	+	388	1	Intergenic	novelGene_9117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTGTTAGAGATTTC	NA	False	NA	NA	False	NA	NA	NA	59374360	59374748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_59374400_59374700
ES.10893.1	chr14	+	3830	14	NNC	ENSMUSG00000035469.18	novel	852	3	NA	NA	-6551	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.91757599271	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTACAGTTGTGGTTGT	NA	False	NA	7	True	AATAAA	-17	NA	59432106	59474715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59432218_59436638_59436737_59437875_59437950_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.10	chr14	+	4345	13	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-167	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.911118768039	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438490	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59453857_59454115_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.12	chr14	+	3993	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-163	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	92.2668605389769	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438494	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.13	chr14	+	2415	13	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-159	-53	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	115.851557319413	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTGAGTCCATTTC	NA	False	NA	1	True	AATATA	-13	NA	59438498	59472921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.14	chr14	+	4132	13	NNC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	-77	13	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	113.215962508238	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTTTTCTCTTTAGT	NA	False	NA	19	True	AATAAA	-29	NA	59438580	59474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59443073_59443197_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.16	chr14	+	4567	5	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-17	382	intron_retention	FALSE	canonical	3	56	junction_1	115.901628547661	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCACTATCTGTTTAA	NA	False	NA	NA	False	ATTAAA	-11	NA	59438640	59462554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865
ES.10893.17	chr14	+	3954	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	93.9149430544768	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438642	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465685_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.18	chr14	+	3788	11	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	98.7633535275104	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438663	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59467335_59467488_59467858_59467990_59472667
ES.10893.2	chr14	+	4270	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	-360	-7	-341	7	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTGGTTGTTTTCTC	NA	False	NA	13	True	AATAAA	-23	NA	59438316	59474721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.20	chr14	+	3719	12	NNC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	7	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	122.487105072701	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTGGTTGTTTTCT	NA	False	NA	12	True	AATAAA	-22	NA	59438664	59474720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447465_59447544_59447883_59448035_59455154_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.21	chr14	+	3728	13	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	117.321377231754	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438668	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59438754_59443073_59443172_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.22	chr14	+	3941	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_5	85.0297954584302	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438668	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460611_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.24	chr14	+	3740	13	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.617489635513	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438679	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59438754_59443073_59443197_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.25	chr14	+	3796	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	92.9098914749355	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGTTGTGGTTGTTTTC	NA	False	NA	11	True	AATAAA	-21	NA	59438681	59474719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455151_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.26	chr14	+	8582	11	ISM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	5	-6	-1	6	intron_retention	FALSE	canonical	3	265	junction_1	28.0658155057002	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTGGTTGTTTTCT	NA	False	NA	12	True	AATAAA	-22	NA	59438681	59474720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858
ES.10893.27	chr14	+	8696	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	3	intron_retention	FALSE	canonical	3	20	junction_2	115.436720170128	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438681	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59443073_59443197_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858
ES.10893.28	chr14	+	2869	10	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	1724	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	104.090890957119	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGACTGTGGAGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	59438681	59469134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59467335_59467488_59467858
ES.10893.29	chr14	+	3466	10	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	101.88337559299	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438682	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59455154_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.3	chr14	+	4333	13	FSM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	-374	-2	-341	2	multi-exon	FALSE	canonical	2	5	junction_1	116.922338897806	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59438316	59474716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59439034_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.31	chr14	+	3616	13	NNC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.360120032797	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGTACAGTTGTGGT	NA	False	NA	4	True	AATAAA	-14	NA	59438685	59474712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59438754_59443073_59443172_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465705_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.32	chr14	+	3778	14	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	133.244936180522	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438687	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59438754_59443073_59443172_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.33	chr14	+	5393	11	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-2	3	intron_retention	FALSE	canonical	3	265	junction_1	29.3327462062453	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438688	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59467488_59467858_59467990_59472667
ES.10893.34	chr14	+	4018	13	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	115.851557319413	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438688	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.35	chr14	+	4055	13	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	116.792878159967	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438688	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59444212_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.36	chr14	+	8283	11	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-2	3	intron_retention	FALSE	canonical	1	1	junction_1	98.4634449935609	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438688	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59438754_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858
ES.10893.37	chr14	+	2985	11	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-1	1724	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	82.491211653121	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGACTGTGGAGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	59438689	59469134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858
ES.10893.38	chr14	+	3564	13	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	117.675637051837	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438689	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465755_59465797_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.39	chr14	+	4140	14	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.124431013313	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59438691	59474716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59443073_59443197_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.42	chr14	+	4107	14	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	127.976190463085	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438697	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59443073_59443172_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.43	chr14	+	3821	13	NNC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.967456535042	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTTGTACAGTTGTG	NA	False	NA	2	True	AATAAA	-12	NA	59438700	59474710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439027_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59466079_59466125_59467335_59467488_59467858_59467990_59472667
ES.10893.44	chr14	+	1361	5	NIC	ENSMUSG00000035469.18	novel	765	6	NA	NA	13	-86	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	158.070395710266	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTACCCTTCTCTCTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	59438703	59459889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59459066
ES.10893.45	chr14	+	3865	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	120.512816094286	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438711	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59459066_59459223_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.46	chr14	+	3900	13	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	118.92046244818	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGTACAGTTGTGGT	NA	False	NA	4	True	AATAAA	-14	NA	59438712	59474712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59444252_59444380_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.47	chr14	+	8611	12	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	25	-1	25	1	intron_retention	FALSE	canonical	2	5	junction_1	122.052759219355	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTACAGTTGTGGTTGT	NA	False	NA	7	True	AATAAA	-17	NA	59438715	59474715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59439034_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858
ES.10893.48	chr14	+	4044	14	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.124431013313	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTTGTACAGTTGTG	NA	False	NA	2	True	AATAAA	-12	NA	59438731	59474710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59443073_59443147_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.49	chr14	+	1693	5	NIC	ENSMUSG00000035469.18	novel	1499	5	NA	NA	43	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	148.426749610709	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTGGCCTCTTTGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	59438733	59459974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59459066
ES.10893.50	chr14	+	2580	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	65	499	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAGAACTAAAAGA	NA	False	NA	13	True	NA	NA	NA	59438755	59473473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.53	chr14	+	2037	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	205	1661	-43	79	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGATGAGAGGATGTT	NA	False	NA	NA	False	NA	NA	NA	59438881	59473053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.54	chr14	+	3980	9	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-28	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	106.193146553815	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438896	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59462225_59463756_59463948_59465703_59466806_59474393
ES.10893.58	chr14	+	2391	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.3996252969171	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59438912	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59468440_59474392
ES.10893.59	chr14	+	3667	12	NNC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	115.290792963483	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTTGTACAGTTGTGG	NA	False	NA	3	True	AATAAA	-13	NA	59438912	59474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465837_59467335_59467488_59467858_59467990_59472667
ES.10893.6	chr14	+	4239	13	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	-209	10	combination_of_known_splicesites	FALSE	canonical	2	16	junction_2	111.314463221193	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGTTGTTTTCTCTTT	NA	False	NA	16	True	AATAAA	-26	NA	59438448	59474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59443073_59443172_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.60	chr14	+	5055	11	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	94.3894061852282	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438940	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59459066_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.61	chr14	+	3802	14	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	128.806859679878	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438943	59474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59439034_59443073_59443172_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.62	chr14	+	1820	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	292	1791	17	-51	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGAGTCCATTTCTT	NA	False	NA	3	True	AATATA	-15	NA	59438968	59472923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.63	chr14	+	6510	13	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	1382	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	116.603911693486	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59440333	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59443172_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.64	chr14	+	8939	11	ISM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	3306	-2	-1079	2	3prime_fragment	FALSE	canonical	3	278	junction_10	25.9453271322603	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	1011	False	NA	8	True	AATAAA	-18	NA	59441982	59474716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.65	chr14	+	3643	4	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	2158	1	intron_retention	FALSE	canonical	1	2	junction_2	151.847145365185	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGCCTCTTTGTTTT	4248	False	NA	NA	False	AGTAAA	-18	NA	59445219	59459976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59447544_59447883_59448035_59455154_59455212_59458865
ES.10893.66	chr14	+	2793	6	ISM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	23388	1	2042	-1	3prime_fragment	FALSE	canonical	3	278	junction_5	32.659454986267	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTACAGTTGTGGTT	NA	False	NA	5	True	AATAAA	-15	NA	59462078	59474713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10893.67	chr14	+	9675	2	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	4634	2	intron_retention	FALSE	canonical	3	369	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTACAGTTGTGGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	59464670	59474716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59467488_59467858
ES.10893.7	chr14	+	3841	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	-193	6	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	90.3297906251319	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTGGTTGTTTTCT	NA	False	NA	12	True	AATAAA	-22	NA	59438464	59474720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ES.10894.1	chr14	-	6226	8	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5077	210	intron_retention	FALSE	canonical	3	300	junction_1	38.7329949520972	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTTGTTGATTTTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	59607996	59584645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.10	chr14	-	4693	8	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5079	0	intron_retention	FALSE	canonical	3	300	junction_1	38.7329949520972	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607998	59586180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.11	chr14	-	1535	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5073	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	106.982989302038	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607992	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607693
ES.10894.12	chr14	-	1126	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5077	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	114.076728564594	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607996	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.13	chr14	-	1624	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5078	-1	intron_retention	FALSE	canonical	2	2	junction_6	145.200723138695	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607997	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593476_59593600_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.14	chr14	-	1185	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5077	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.649475837174	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607996	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597020_59599182_59599305_59607902
ES.10894.15	chr14	-	5226	7	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5078	-1	intron_retention	FALSE	canonical	3	329	junction_3	34.8684033984287	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59607997	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.16	chr14	-	1305	8	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5086	-1	intron_retention	FALSE	canonical	3	27	junction_1	121.308175608191	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTGCACCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	59608005	59586181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.17	chr14	-	3169	8	NNC	ENSMUSG00000068245.15	novel	2973	9	NA	NA	-5085	-2	intron_retention	FALSE	canonical	3	330	junction_4	29.9278042861109	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGTGTGCACCGTTT	NA	False	NA	-3	True	AATAAA	-14	NA	59608004	59586182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590831_59591756_59591825_59592588_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.18	chr14	-	3592	4	ISM	ENSMUSG00000068245.15	ENSMUST00000160425.8	1281	8	7500	2	7466	-2	intron_retention	FALSE	canonical	3	27	junction_1	160.06734693733	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGTGTGCACCGTTT	2575	False	NA	-3	True	AATAAA	-14	NA	59595393	59586182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588
ES.10894.19	chr14	-	4797	1	NIC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	11879	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAAGTGTGCACCGTT	6988	False	NA	-4	True	AATAAA	-13	NA	59590980	59586183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59586200_59591000
ES.10894.2	chr14	-	3836	2	NNC	ENSMUSG00000068245.15	novel	2973	9	NA	NA	13107	210	intron_retention	FALSE	canonical	2	2	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTTGTTGATTTTTGT	8216	False	NA	NA	False	AATAAA	-33	NA	59589752	59584645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59587325_59588595
ES.10894.20	chr14	-	1320	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5085	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.339639195947	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59608004	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586495_59586670_59586838_59588595_59588668_59590099_59590226_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.22	chr14	-	1094	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5077	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	113.487265254741	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59607996	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59607902
ES.10894.23	chr14	-	2193	2	ISM	ENSMUSG00000068245.15	ENSMUST00000161031.2	1130	10	12721	-314	12721	-7	intron_retention	FALSE	canonical	3	352	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	7830	False	NA	-8	True	AATAAA	-9	NA	59590138	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_59586838_59588595
ES.10894.24	chr14	-	2404	7	NNC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	-5064	-7	intron_retention	FALSE	canonical	3	27	junction_1	130.847769904148	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59607983	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59590766_59590831_59591756_59591825_59592588_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.25	chr14	-	1261	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5086	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	109.915568045502	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59608005	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.26	chr14	-	1528	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-4902	-7	intron_retention	FALSE	canonical	3	15	junction_9	112.089690718782	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59607821	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607693
ES.10894.27	chr14	-	4564	31	Fusion	ENSMUSG00000068245.15_ENSMUSG00000071350.13	novel	2666	11	NA	NA	-3	-7	multi-exon	FALSE	canonical	0	0	junction_10	134.805971677816	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59678329	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59644090_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.29	chr14	-	1200	10	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5085	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	114.002923939111	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59608004	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.3	chr14	-	2920	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5137	204	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTTAACTTGTTGAT	NA	False	NA	NA	False	AATAAA	-27	NA	59608056	59584651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.30	chr14	-	6238	3	NIC	ENSMUSG00000068245.15	novel	1281	8	NA	NA	8744	-7	intron_retention	FALSE	canonical	3	330	junction_2	32	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	3853	False	NA	-8	True	AATAAA	-9	NA	59594115	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59590831_59591756_59591825_59592588
ES.10894.31	chr14	-	1850	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5079	-7	intron_retention	FALSE	canonical	0	0	junction_9	145.566101823192	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTGAAGTGTGCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59607998	59586187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59599720_59600075_59607902
ES.10894.32	chr14	-	1962	6	ISM	ENSMUSG00000068245.15	ENSMUST00000161031.2	1130	10	5853	2166	5853	-2166	internal_fragment	FALSE	canonical	3	300	junction_1	45.466471162825	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAGGGATCGAGACC	962	False	NA	NA	False	AATAAA	-26	NA	59597006	59588667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924
ES.10894.33	chr14	-	8184	6	NIC	ENSMUSG00000091144.3	novel	3459	10	NA	NA	-1381	1	intron_retention	FALSE	canonical	2	13	junction_3	6.60302960768767	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGTTCACAGTTTATT	9328	False	NA	0	True	AATAAA	-17	NA	59634211	59618280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59618934_59620759_59620832_59622232_59623798_59624795_59626849_59628314_59628423_59630478
ES.10894.34	chr14	-	3981	22	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	3459	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	5	junction_9	49.8120276162103	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGAGTTCACAGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59678328	59618281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.35	chr14	-	4082	23	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	2995	14	NA	NA	-13	0	intron_retention	FALSE	canonical	2	9	junction_9	48.8120023175441	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGAGTTCACAGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59678346	59618281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.36	chr14	-	3954	22	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	3459	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	2	junction_6	50.3876132062817	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGAGTTCACAGTTT	NA	False	NA	-3	True	AATAAA	-14	NA	59678325	59618283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626739_59626849_59628314_59628423_59630478_59630601_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.37	chr14	-	4075	23	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	2995	14	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_17	49.883438514366	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGAAGAGTTCACAGTT	NA	False	NA	-4	True	AATAAA	-13	NA	59678329	59618284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656436_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.38	chr14	-	3883	21	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	3034	15	NA	NA	-2	-7	intron_retention	FALSE	canonical	0	0	junction_7	50.9260247810488	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACTGAAGAGTTCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59678328	59618288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.39	chr14	-	4152	9	NNC	ENSMUSG00000091144.3	novel	3459	10	NA	NA	-560	-7	intron_retention	FALSE	canonical	0	0	junction_1	8.50643139042454	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACTGAAGAGTTCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59633390	59618288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59618926_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626739_59626849_59628314_59628423_59630478
ES.10894.4	chr14	-	2280	1	NIC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	15722	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCATGTTGCATCAAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	59587137	59584857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59584900_59587100
ES.10894.40	chr14	-	3271	10	NNC	ENSMUSG00000091144.3	novel	3459	10	NA	NA	159	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	40.0456529599363	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACTGAAGAGTTCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59632671	59618288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59618597_59618766_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626739_59626849_59628314_59628423_59630478
ES.10894.41	chr14	-	3992	22	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	3034	15	NA	NA	-3	-7	intron_retention	FALSE	canonical	2	9	junction_9	50.2554472403168	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACTGAAGAGTTCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59678329	59618288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.42	chr14	-	4039	22	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	3459	10	NA	NA	28	-7	intron_retention	FALSE	canonical	1	1	junction_9	51.9518790076577	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACTGAAGAGTTCAC	NA	False	NA	-8	True	AATAAA	-9	NA	59678294	59618288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59638418_59638584_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.43	chr14	-	3873	24	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	2995	14	NA	NA	7	-8	multi-exon	FALSE	canonical	2	9	junction_10	49.6814807288411	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACCACTGAAGAGTTCA	NA	False	NA	-9	True	AATAAA	-8	NA	59678315	59618289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_59618597_59618766_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.44	chr14	-	6724	2	NNC	ENSMUSG00000091144.3	novel	3459	10	NA	NA	2241	-3690	intron_retention	FALSE	canonical	2	2	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTCAGAAACAGGAGTC	NA	False	NA	NA	False	NA	NA	NA	59630589	59621971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59624846_59626739
ES.10894.45	chr14	-	4660	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	1	1732	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTTCTCTCTATAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	59678332	59637725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.46	chr14	-	2930	14	NNC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-8	1724	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.1106171230339	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTCCCCCTTTTCTCTC	NA	False	NA	NA	False	AATAAA	-8	NA	59678341	59637733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59637741_59639471_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.47	chr14	-	4260	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	5	-1270	-2	1270	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTCTATTTTCTTAG	NA	False	NA	NA	False	ATTAAA	-24	NA	59678328	59638187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.49	chr14	-	3006	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	-11	0	-11	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	TATAAA	-13	NA	59678344	59639457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.5	chr14	-	4584	5	NIC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	9433	-4	intron_retention	FALSE	canonical	3	300	junction_2	34.2636833980236	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCCATGTTGCATCAAA	4542	False	NA	NA	False	AATAAA	-23	NA	59593426	59584859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59586838_59588595_59590232_59590766_59590831_59591756_59591825_59592588
ES.10894.51	chr14	-	2926	13	NIC	ENSMUSG00000071350.13	novel	3034	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTGTGATTATT	NA	False	NA	NA	False	TATAAA	-11	NA	59678332	59639459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
ES.10894.52	chr14	-	2579	12	NIC	ENSMUSG00000071350.13	novel	3034	15	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	43.7604296895217	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTGTGATTATT	NA	False	NA	NA	False	TATAAA	-11	NA	59678314	59639459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59678035
ES.10894.53	chr14	-	3246	15	NNC	ENSMUSG00000071350.13	novel	3034	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.4170550495758	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTGTGATTATT	NA	False	NA	NA	False	TATAAA	-11	NA	59678328	59639459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660468_59660727_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.54	chr14	-	3204	15	NNC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.2820685488684	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATTTGTTTTTGTGAT	NA	False	NA	NA	False	TATAAA	-7	NA	59678340	59639463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59655719_59655928_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ES.10894.6	chr14	-	2776	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5085	-58	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTATCTTTTCTCATGA	NA	False	NA	NA	False	AATAAA	-17	NA	59608004	59584913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.7	chr14	-	2596	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5078	-61	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGGTATCTTTTCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	59607997	59584916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.8	chr14	-	1352	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5097	1	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGCACCGTTTATT	NA	False	NA	0	True	AATAAA	-17	NA	59608016	59586179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10894.9	chr14	-	1511	10	NNC	ENSMUSG00000068245.15	novel	1130	10	NA	NA	-5086	1	intron_retention	FALSE	canonical	3	300	junction_3	34.2669260690571	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTGCACCGTTTATT	NA	False	NA	0	True	AATAAA	-17	NA	59608005	59586179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
ES.10895.1	chr14	+	1512	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-28	1553	-19	-1553	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGATTGCTTATGG	NA	False	NA	7	True	AATATA	-13	NA	59678401	59784799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.10	chr14	+	831	7	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-3	6417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	118.751374261054	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTTGTGTTGTTTTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	59678426	59746559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59746411
ES.10895.11	chr14	+	3177	12	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	123.863894912157	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	59678428	59786353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59678472_59681645_59681780_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.13	chr14	+	3030	11	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	98.0426437832028	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678429	59786352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678468_59696542_59696691_59699090_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.14	chr14	+	3139	12	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.863894912157	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTGGTCTCATTCCT	NA	False	NA	3	True	AATAAA	-10	NA	59678429	59786350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678468_59689879_59689984_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.15	chr14	+	1508	12	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	-1596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.863894912157	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAAAAATCAACCT	NA	False	NA	-36	True	TATAAA	-9	NA	59678429	59784756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678472_59681645_59681709_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.16	chr14	+	1001	9	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	6	22241	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	137.528178930719	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59678435	59762383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59760901_59760999_59762322
ES.10895.17	chr14	+	2967	10	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	125.516709821619	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678435	59786352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59678472_59696542_59696691_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.18	chr14	+	1619	13	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	8	-1593	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	131.701340371143	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAATCAACCTAGA	NA	False	NA	-33	True	TATAAA	-12	NA	59678437	59784759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59678468_59696542_59696691_59699083_59699152_59715480_59715523_59716492_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.19	chr14	+	4250	1	Intergenic	novelGene_9119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCCATATTGGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-38	NA	59730001	59734251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_59730000_59734300
ES.10895.2	chr14	+	3061	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	-22	-2	-13	2	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTCATTCCTCTTC	NA	False	NA	7	True	AATAAA	-14	NA	59678407	59786354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.20	chr14	+	1049	7	ISM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	58561	1594	20726	-1594	3prime_fragment	FALSE	canonical	3	235	junction_5	42.1109645262767	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAATCAACCTAG	NA	False	NA	-34	True	TATAAA	-11	NA	59736990	59784758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.21	chr14	+	4296	1	Intergenic	novelGene_9120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59758115	59762411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_59758100_59762400
ES.10895.22	chr14	+	4977	2	Intergenic	novelGene_9121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTGACATTAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59770889	59776196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_59773985_59774314
ES.10895.4	chr14	+	3170	12	NNC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	123.463984108325	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	False	NA	6	True	AATAAA	-13	NA	59678414	59786353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59758778_59758896_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10895.5	chr14	+	1919	3	ISM	ENSMUSG00000021981.11	ENSMUST00000224281.2	3546	5	-15	39341	-6	1679	5prime_fragment	FALSE	canonical	3	224	junction_1	58	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGATAGATGGAGCCG	NA	False	NA	NA	False	NA	NA	NA	59678414	59700801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_59678468_59696542_59696691_59699083
ES.10895.6	chr14	+	2986	10	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	104.740950285295	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678414	59786352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59776510_59776655_59784434
ES.10895.9	chr14	+	3189	12	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	119.008785008044	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678418	59786352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59678468_59696542_59696691_59699083_59699152_59716492_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ES.10896.1	chr14	-	178	1	Intergenic	novelGene_9118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACATGCTCAG	NA	False	NA	NA	False	NA	NA	NA	59699535	59699357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_59699400_59699500
ES.10897.1	chr14	+	171	1	Intergenic	novelGene_9122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATTTTAAAAAAAAAAAAG	NA	False	NA	3	True	NA	NA	NA	59816624	59816795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_59816600_59816800
ES.10898.1	chr14	-	2417	11	NNC	ENSMUSG00000021982.15	novel	2202	10	NA	NA	58	29	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	42.8579047551324	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTGTTGTTGTTGT	NA	False	NA	-3	True	NA	NA	NA	59835227	59801395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.10	chr14	-	2134	11	NNC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.8702316016278	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGGAACAGCTTCATA	NA	False	NA	NA	False	AATAAA	-22	NA	59835392	59805184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59805469_59806396_59806458_59811095_59811203_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.11	chr14	-	5245	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	4	-2670	2	2670	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTTTGGATTGGTT	NA	False	NA	NA	False	NA	NA	NA	59835391	59819351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.12	chr14	-	2575	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	1	3	-1	-3	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAAATAGGGTCGTT	NA	False	NA	NA	False	TATAAA	-34	NA	59835394	59822024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.13	chr14	-	1679	6	NNC	ENSMUSG00000021982.15	novel	2579	5	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	45.1734435260364	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGATTTCAAGGAAAAA	NA	False	NA	NA	False	TATAAA	-22	NA	59835399	59822036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59822599_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.14	chr14	-	1690	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	-5	894	-5	-894	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGGTAAAAACGTTACTA	NA	False	NA	NA	False	AAGAAA	-5	NA	59835400	59822915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.15	chr14	-	488	1	NIC	ENSMUSG00000021982.15	novel	3189	11	NA	NA	11578	-1198	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACTAAATATTT	NA	False	NA	NA	False	AGTAAA	-9	NA	59823707	59823219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59823200_59823700
ES.10898.16	chr14	-	3874	4	NIC	ENSMUSG00000021982.15	novel	2579	5	NA	NA	33	-1741	intron_retention	FALSE	canonical	3	110	junction_2	8.33999733546454	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGTTTCAAATGAAG	NA	False	NA	0	True	AATAAA	-16	NA	59835252	59823762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.17	chr14	-	861	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	-23	1741	-10	-1741	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGTTTCAAATGAAG	NA	False	NA	0	True	AATAAA	-16	NA	59835418	59823762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.2	chr14	-	2232	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	-1	-29	-1	29	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTGTTGTTGTTGT	NA	False	NA	-3	True	NA	NA	NA	59835394	59801395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.3	chr14	-	2203	10	NNC	ENSMUSG00000021982.15	novel	2202	10	NA	NA	8	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	37.7686263425408	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTGTTGTTGTTGT	NA	False	NA	-3	True	NA	NA	NA	59835376	59801395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827409_59829914_59829985_59834310_59834409_59835203
ES.10898.4	chr14	-	2427	11	NNC	ENSMUSG00000021982.15	novel	3189	11	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.470429951783	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTGTTGTTGTTGT	NA	False	NA	-3	True	NA	NA	NA	59835388	59801395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822910_59823112_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.5	chr14	-	2546	11	NNC	ENSMUSG00000021982.15	novel	2202	10	NA	NA	-1	23	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	43.6555838352896	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTAAATGTGGTGTTGT	NA	False	NA	-9	True	NA	NA	NA	59835394	59801401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835235
ES.10898.6	chr14	-	2244	7	NNC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	7899	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.0722272043767	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTCATAGTGTATA	NA	False	NA	NA	False	AATAAA	-29	NA	59827386	59805177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59806231_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236
ES.10898.7	chr14	-	7437	8	NIC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	45	junction_3	29.8950545360648	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAGCTTCATAGTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	59835393	59805179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.8	chr14	-	1887	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	2	3	2	-3	multi-exon	FALSE	canonical	3	10	junction_1	37.821543276319	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAACAGCTTCATAGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	59835391	59805180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10898.9	chr14	-	7782	9	NNC	ENSMUSG00000021982.15	novel	1892	10	NA	NA	2	-7	intron_retention	FALSE	canonical	2	6	junction_4	44.8230897529387	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGGAACAGCTTCATA	NA	False	NA	NA	False	AATAAA	-22	NA	59835391	59805184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59811286_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ES.10899.1	chr14	-	177	1	Intergenic	novelGene_9123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	59851719	59851542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_59851500_59851700
ES.109.1	chr1	+	187	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13121892	13122079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13121900_13122100
ES.1090.1	chr1	-	6252	1	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAGCTGTTAATAAGC	NA	False	NA	NA	False	NA	NA	NA	95445378	95439126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_95439100_95445400
ES.10900.1	chr14	+	3168	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	-39	-10	-39	10	multi-exon	TRUE	canonical	3	42	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTATTTTGTGATTAG	NA	False	NA	15	True	AATAAA	-27	NA	59862717	59869119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_59863850_59867083
ES.10900.2	chr14	+	6349	1	NIC	ENSMUSG00000044461.7	novel	3119	2	NA	NA	1	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCGGGGAATGCTT	NA	False	NA	2	True	AATAAA	-14	NA	59862757	59869106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_59862800_59869100
ES.10900.3	chr14	+	5902	2	NNC	ENSMUSG00000044461.7	novel	3119	2	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCGGGGAATGCTTATT	NA	False	NA	5	True	AATAAA	-17	NA	59862762	59869109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_59863850_59864294
ES.10901.2	chr14	-	3921	37	NNC	ENSMUSG00000021983.17	novel	12886	36	NA	NA	-34431	-8991	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.640095478989051	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTAAACATCAATACCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	60359235	59884979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59885374_59891997_59892090_59922363_59922469_59928900_59928990_60009087_60009196_60011149_60011207_60011409_60011472_60028629_60028709_60031315_60031439_60039692_60039768_60094477_60094589_60097578_60097763_60162455_60162629_60235449_60235515_60243677_60243817_60245803_60245944_60247251_60247337_60249827_60249898_60253322_60253373_60254237_60254321_60255008_60255115_60258207_60258284_60260571_60260617_60260897_60260987_60263589_60263668_60264373_60264502_60265397_60265564_60271158_60271271_60272633_60272762_60274416_60274487_60276422_60276497_60281765_60281807_60282416_60282463_60283452_60283552_60284109_60284210_60324030_60324176_60359101
ES.10901.3	chr14	-	1723	14	NNC	ENSMUSG00000021983.17	novel	12886	36	NA	NA	158925	-8992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.421325044234743	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTTAAACATCAATACCA	578	False	NA	NA	False	ATTAAA	-16	NA	60165358	59884980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_59885374_59891997_59892090_59922363_59922469_59928900_59928990_60009087_60009196_60011149_60011207_60011409_60011472_60028629_60028709_60031315_60031439_60039692_60039768_60094477_60094589_60097578_60097763_60162455_60162629_60165286
ES.10902.1	chr14	+	4265	1	Antisense	novelGene_ENSMUSG00000021983.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAACAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	60414740	60419005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_60414700_60419000
ES.10903.1	chr14	-	5989	1	FSM	ENSMUSG00000114584.2	ENSMUST00000225931.2	5446	1	-538	-5	-538	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATGGTTTGTTTTCTTT	NA	False	NA	NA	False	GATAAA	-26	NA	60454406	60448417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60448400_60454400
ES.10904.1	chr14	-	7188	1	NIC	ENSMUSG00000063895.8	novel	3602	16	NA	NA	26693	-32939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGTCCCAACAACAGC	NA	False	NA	NA	False	NA	NA	NA	60462187	60454999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60455000_60462200
ES.10904.11	chr14	-	6571	1	NIC	ENSMUSG00000063895.8	novel	3602	16	NA	NA	26785	-33464	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	-14	True	AATAAA	-20	NA	60462095	60455524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60455500_60462100
ES.10904.12	chr14	-	3870	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	59.493954417612	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	-14	True	AATAAA	-20	NA	60488962	60455524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460816_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.13	chr14	-	3761	14	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	64.7098210996257	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	-14	True	AATAAA	-20	NA	60488901	60455524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60457608_60459031_60459128_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.14	chr14	-	3817	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.7505417202144	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	-14	True	AATAAA	-20	NA	60488867	60455524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470106_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.16	chr14	-	6887	13	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-13	0	intron_retention	FALSE	canonical	3	198	junction_6	17.271524413194	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488868	60455526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.17	chr14	-	2230	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	64.0231144484042	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488837	60455526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60456044_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.19	chr14	-	3868	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	65.1182597671501	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488877	60455526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480978_60481962_60482113_60484772_60484916_60488611
ES.10904.2	chr14	-	5723	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	57	-2844	18	505	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60488837	60455021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.20	chr14	-	5522	14	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-13	0	intron_retention	FALSE	canonical	3	19	junction_2	61.1951964700328	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488868	60455526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460816_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.22	chr14	-	3682	14	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	65.7695456582655	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488868	60455526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60488611
ES.10904.24	chr14	-	3787	14	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	66.3346366815153	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTGTAGGTCTCAG	NA	False	NA	-18	True	AATAAA	-16	NA	60488857	60455528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.26	chr14	-	3785	14	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.3346366815153	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTGTAGGTCTCAG	NA	False	NA	-18	True	AATAAA	-16	NA	60488857	60455528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476990_60479991_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.29	chr14	-	3714	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	93	106	-8	-106	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACTTGTAGCATTCAT	NA	False	NA	-122	True	NA	NA	NA	60488863	60455632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.3	chr14	-	7448	13	NIC	ENSMUSG00000114797.2	novel	2936	14	NA	NA	4	505	intron_retention	FALSE	canonical	3	198	junction_6	17.271524413194	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60488924	60455021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.30	chr14	-	3526	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	55	332	-7	-332	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATATTTTTGTAAT	NA	False	NA	NA	False	ATTAAA	-33	NA	60488901	60455858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.31	chr14	-	3502	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	18	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.2210135787914	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATATTTTTGTAAT	NA	False	NA	NA	False	ATTAAA	-33	NA	60488876	60455858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457603_60459025_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.33	chr14	-	3305	14	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	12	-345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	67.5328541565699	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCACTAAACATTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	60488843	60455871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60484772_60484916_60488611
ES.10904.34	chr14	-	3828	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	57	-949	18	949	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCCTCAGACTGTTAT	NA	False	NA	2	True	CATAAA	-23	NA	60488837	60456916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.35	chr14	-	2467	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	54	1392	-8	947	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCCTCAGACTGTT	NA	False	NA	0	True	CATAAA	-21	NA	60488902	60456918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.36	chr14	-	2383	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-14	947	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	59.493954417612	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCCTCAGACTGTT	NA	False	NA	0	True	CATAAA	-21	NA	60488869	60456918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460816_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.37	chr14	-	2102	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	80	1731	18	608	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCAGTTTTGGTTGCTC	NA	False	NA	NA	False	NA	NA	NA	60488876	60457257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.38	chr14	-	6267	11	NIC	ENSMUSG00000114797.2	novel	2936	14	NA	NA	-19	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	74.1792423795229	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTTTTTATCTATT	NA	False	NA	NA	False	NA	NA	NA	60488874	60461420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.39	chr14	-	3989	13	Fusion	ENSMUSG00000114797.2_ENSMUSG00000076270.3	novel	3080	6	NA	NA	-11	13	multi-exon	FALSE	canonical	1	1	junction_1	68.7432825001024	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTTGTTTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	60488939	60461423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_60463793_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.4	chr14	-	4021	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	-19	-89	-19	89	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATAGTCTTGTTCTCT	NA	False	NA	73	True	NA	NA	NA	60488975	60455437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.40	chr14	-	6340	12	ISM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	-31	3558	3	13	5prime_fragment	FALSE	canonical	3	198	junction_5	17.8552490140959	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTTGTTTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	60488925	60461423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.41	chr14	-	3822	12	Fusion	ENSMUSG00000114797.2_ENSMUSG00000076270.3	novel	3080	6	NA	NA	-7	0	multi-exon	FALSE	canonical	0	0	junction_10	95.5172088687826	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAACATTGTC	NA	False	NA	NA	False	NA	NA	NA	60488935	60461436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_60463793_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60484772_60484916_60488611
ES.10904.42	chr14	-	5611	12	Fusion	ENSMUSG00000114797.2_ENSMUSG00000076270.3	novel	3080	6	NA	NA	27	0	intron_retention	FALSE	non_canonical	0	0	junction_11	92.6669144020313	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAACATTGTC	NA	False	NA	NA	False	NA	NA	NA	60488828	60461436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_60463793_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60480107_60480805_60480944_60481962_60482113_60484772_60484914_60488611
ES.10904.6	chr14	-	3884	14	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.3346366815153	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTCTCAGCAGTTGTA	NA	False	NA	-10	True	AATAAA	-24	NA	60488926	60455520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60479975_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.7	chr14	-	5277	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	4	-2345	4	6	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTCTCAGCAGTTGTA	NA	False	NA	-10	True	AATAAA	-24	NA	60488890	60455520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10904.9	chr14	-	5465	14	NIC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	-13	2	intron_retention	FALSE	canonical	3	198	junction_7	19.4626025856843	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	False	NA	-14	True	AATAAA	-20	NA	60488868	60455524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_60457608_60459031_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ES.10905.1	chr14	+	3914	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	-99	-2	-99	2	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTTTTCTTTTGG	NA	False	NA	11	True	ATTAAA	-15	NA	60502577	60539821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.3	chr14	+	6137	13	NIC	ENSMUSG00000021987.10	novel	3813	14	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	64	junction_3	12.9034879005639	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTGAGTGTTTTTC	NA	False	NA	5	True	ATTAAA	-9	NA	60502664	60539815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.4	chr14	+	4224	13	NIC	ENSMUSG00000021987.10	novel	3813	14	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	64	junction_3	13.4308930786039	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTGTTTTTCTT	NA	False	NA	7	True	ATTAAA	-11	NA	60502667	60539817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.5	chr14	+	3618	13	NIC	ENSMUSG00000021987.10	novel	3813	14	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	26.8664392049925	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTGTTTTTCTT	NA	False	NA	7	True	ATTAAA	-11	NA	60502706	60539817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60502811_60514577_60514695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.6	chr14	+	3284	11	NNC	ENSMUSG00000021987.10	novel	2877	4	NA	NA	-11977	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7290793448032	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTGAGTGTTTTTC	NA	False	NA	5	True	ATTAAA	-9	NA	60521726	60539815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60521774_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.7	chr14	+	3298	11	ISM	ENSMUSG00000021987.10	ENSMUST00000224366.2	1968	15	19636	-1849	-11281	0	3prime_fragment	FALSE	canonical	0	0	junction_2	37.1603283085605	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTTTCTTTT	NA	False	NA	9	True	ATTAAA	-13	NA	60522422	60539819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_60522495_60526991_60527127_60528154_60528269_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ES.10905.8	chr14	+	273	1	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	36424	446	5397	-446	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGATTTTATCTAGTCC	NA	False	NA	NA	False	AAAAAG	-14	NA	60539100	60539373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_60539100_60539400
ES.10906.1	chr14	-	177	1	Intergenic	novelGene_9124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTCTTTAACCAA	NA	False	NA	NA	False	NA	NA	NA	60791002	60790825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_60790800_60791000
ES.10907.1	chr14	+	172	1	Intergenic	novelGene_9125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAGCGAACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	60830924	60831096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_60830900_60831100
ES.10908.1	chr14	-	174	1	Intergenic	novelGene_9126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGAGACCACA	NA	False	NA	NA	False	NA	NA	NA	60839412	60839238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_60839200_60839400
ES.10909.1	chr14	+	7536	13	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-54	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	3.66192875711997	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTCTAGTGATGCATC	NA	False	NA	6	True	ATTAAA	-14	NA	60872123	61002000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60872314_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.10	chr14	+	5853	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTAGTGATGCATCTC	NA	False	NA	8	True	ATTAAA	-16	NA	60940401	61002002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.11	chr14	+	4480	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	1	515	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATTTTCAGTT	NA	False	NA	NA	False	AATACA	-18	NA	60940402	61000630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.12	chr14	+	5727	12	NNC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.73376255680781	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTAGTGATGCATCT	NA	False	NA	7	True	ATTAAA	-15	NA	60940415	61002001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993771_60994034_60997031_60997107_60998324
ES.10909.13	chr14	+	178	1	Intergenic	novelGene_9127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTACAGAAGATG	NA	False	NA	NA	False	NA	NA	NA	60950570	60950748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_60950600_60950700
ES.10909.14	chr14	+	4054	10	NNC	ENSMUSG00000021990.17	novel	3161	5	NA	NA	-9048	512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.08327886689299	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAGTTTTTATTTTCA	NA	False	NA	NA	False	AATACA	-15	NA	60961306	61000627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60961589_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991335_60993660_60994034_60997031_60997107_60998324
ES.10909.15	chr14	+	5443	10	NNC	ENSMUSG00000021990.17	novel	3161	5	NA	NA	-9039	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.51764845241562	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTCTAGTGATGCATC	NA	False	NA	6	True	ATTAAA	-14	NA	60961315	61002000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60961589_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.16	chr14	+	5515	9	ISM	ENSMUSG00000021990.17	ENSMUST00000162945.2	5469	10	12392	0	-5779	0	3prime_fragment	FALSE	canonical	3	12	junction_1	2.82566363886433	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	4	True	ATTAAA	-12	NA	60982746	61001998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.17	chr14	+	4859	7	ISM	ENSMUSG00000021990.17	ENSMUST00000162945.2	5469	10	14527	0	-3644	0	3prime_fragment	FALSE	canonical	3	13	junction_6	2.60874597374975	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	4	True	ATTAAA	-12	NA	60984881	61001998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.2	chr14	+	7812	14	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-49	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.61064077809553	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTAGTGATGCATCTC	NA	False	NA	8	True	ATTAAA	-16	NA	60872128	61002002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60872314_60873816_60874096_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.3	chr14	+	5642	13	NNC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-29	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.60124146573119	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATAGTCTTTGGTCCTG	NA	False	NA	NA	False	TTTAAA	-4	NA	60872148	61000208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60872314_60928302_60929998_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993771_60994034_60997031_60997107_60998320
ES.10909.4	chr14	+	7538	13	FSM	ENSMUSG00000021990.17	ENSMUST00000022566.14	7517	13	-24	3	-24	-3	multi-exon	FALSE	canonical	2	7	junction_3	4.19242040936842	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTAGTGATGCATCTC	NA	False	NA	8	True	ATTAAA	-16	NA	60872153	61002002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_60872314_60928302_60929998_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.5	chr14	+	5969	14	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-6	87	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.61064077809553	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTGAATAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	60872171	61000202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60872314_60873816_60874096_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.6	chr14	+	6164	13	NNC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	-3	515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.24603024517905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATTTTCAGTT	NA	False	NA	NA	False	AATACA	-18	NA	60872174	61000630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_60872363_60928302_60929998_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.7	chr14	+	6133	13	FSM	ENSMUSG00000021990.17	ENSMUST00000022566.14	7517	13	10	1374	5	516	multi-exon	FALSE	canonical	2	7	junction_3	4.19242040936842	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTTATTTTCAGTTC	NA	False	NA	NA	False	AATACA	-19	NA	60872187	61000631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_60872314_60928302_60929998_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.8	chr14	+	6403	14	NIC	ENSMUSG00000021990.17	novel	7517	13	NA	NA	10	512	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.76666609661271	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAGTTTTTATTTTCA	NA	False	NA	NA	False	AATACA	-15	NA	60872192	61000627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60872314_60873816_60874096_60928302_60929998_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.10909.9	chr14	+	5827	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	3.46648653907957	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTCTAGTGATGCATC	NA	False	NA	6	True	ATTAAA	-14	NA	60940395	61002000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_60940572_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ES.1091.1	chr1	-	5260	5	FSM	ENSMUSG00000040710.11	ENSMUST00000043336.11	5390	5	128	2	92	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTCTTATCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	95595168	95515408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_95519690_95555231_95555526_95581237_95581496_95588588_95588721_95594873
ES.10910.1	chr14	+	1021	4	FSM	ENSMUSG00000071347.4	ENSMUST00000025940.7	1903	4	-285	1167	-285	-1167	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAATGAACTGAACCACT	NA	False	NA	NA	False	ATTAAA	-15	NA	61005297	61017151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61005618_61009724_61009912_61014473_61014537_61016700
ES.10911.1	chr14	+	2465	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	-65	615	-65	-615	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTCACCTGCTTGGCA	NA	False	NA	NA	False	AATAAA	-21	NA	61021956	61141063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10911.10	chr14	+	2190	17	NIC	ENSMUSG00000021993.11	novel	3015	19	NA	NA	27	-619	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	61.9635729683174	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGTGTCTCACCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	61022113	61141059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10911.11	chr14	+	2365	20	NNC	ENSMUSG00000021993.11	novel	3442	20	NA	NA	53	-619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.4564221470939	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGTGTCTCACCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	61022139	61141059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61035678_61035766_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10911.2	chr14	+	2173	10	ISM	ENSMUSG00000021993.11	ENSMUST00000223709.2	2821	17	-92	48802	-27	16819	5prime_fragment	FALSE	canonical	3	207	junction_1	12.2836838484589	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTTTTTTTTTGAG	NA	False	NA	NA	False	AGTAAA	-18	NA	61021994	61053385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401
ES.10911.3	chr14	+	2755	20	NNC	ENSMUSG00000021993.11	novel	3442	20	NA	NA	-19	-619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	76.2267356998649	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGTGTCTCACCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	61022002	61141059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61063748_61064089_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10911.4	chr14	+	2235	19	NNC	ENSMUSG00000021993.11	novel	3015	19	NA	NA	-3	-623	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	58.4302897941821	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACACCGTGTCTCACCT	NA	False	NA	NA	False	AATAAA	-13	NA	61022018	61141055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61022160_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10911.5	chr14	+	4933	8	NNC	ENSMUSG00000021993.11	novel	3172	16	NA	NA	-1	17122	intron_retention	FALSE	canonical	0	0	junction_4	110.877575436577	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATACAAAAGAATA	NA	False	NA	NA	False	AATGAA	-31	NA	61022020	61053688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61035596_61035766_61039569_61039753_61040261_61040419_61052401
ES.10911.6	chr14	+	2423	19	NNC	ENSMUSG00000021993.11	novel	3015	19	NA	NA	-1	-620	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	59.1384909438101	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGTGTCTCACCTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	61022020	61141058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046389_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ES.10912.1	chr14	-	1924	1	Intergenic	novelGene_9128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	7685	False	NA	NA	False	NA	NA	NA	61039183	61037259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61037300_61039200
ES.10913.1	chr14	-	149	1	Intergenic	novelGene_9129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	3341	False	NA	NA	False	NA	NA	NA	61170153	61170004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61170000_61170200
ES.10914.1	chr14	-	211	1	Intergenic	novelGene_9130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGATAGAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	61186777	61186566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61186600_61186800
ES.10915.1	chr14	-	176	1	Intergenic	novelGene_9131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	61193330	61193154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61193200_61193300
ES.10916.1	chr14	-	4609	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	-352	-206	-331	45	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTAGTTGTGGTTA	NA	False	NA	19	True	AATAAA	-40	NA	61284270	61201278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
ES.10916.10	chr14	-	595	5	ISM	ENSMUSG00000060548.14	ENSMUST00000224371.2	1239	6	282	22212	261	-22051	5prime_fragment	FALSE	canonical	3	46	junction_4	15.833114033569	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61283657	61234021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
ES.10916.11	chr14	-	2621	2	Antisense	novelGene_ENSMUSG00000115627.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61279610	61276763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_61276882_61277107
ES.10916.2	chr14	-	3814	8	NNC	ENSMUSG00000060548.14	novel	3958	10	NA	NA	-29586	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.0630405399191	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGTCAAGTCAAAATG	NA	False	NA	1	True	AATAAA	-22	NA	61242920	61201296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61242786
ES.10916.3	chr14	-	4424	11	NNC	ENSMUSG00000060548.14	novel	4051	10	NA	NA	-117	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.5569326773056	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61284056	61201297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61280043_61280092_61283563
ES.10916.4	chr14	-	4021	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	-37	-26	-37	26	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGTCAAGTCAAAAT	NA	False	NA	0	True	AATAAA	-21	NA	61275436	61201297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
ES.10916.5	chr14	-	2746	11	NNC	ENSMUSG00000060548.14	novel	3958	10	NA	NA	-37	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.9246986482003	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATGTGTCAAGTCAAAA	NA	False	NA	-1	True	AATAAA	-20	NA	61275436	61201298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61202533_61203806_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
ES.10916.7	chr14	-	3712	8	NNC	ENSMUSG00000060548.14	novel	3958	10	NA	NA	-29305	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.9617117878277	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTATGTGTCAAGTCAAA	NA	False	NA	-2	True	AATAAA	-19	NA	61242639	61201299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61219532_61219631_61234053_61234140_61242523
ES.10916.8	chr14	-	3416	11	NNC	ENSMUSG00000060548.14	novel	4051	10	NA	NA	-28	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.1117502376875	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTATGTGTCAAGTCAAA	NA	False	NA	-2	True	AATAAA	-19	NA	61283967	61201299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61202703_61203571_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
ES.10916.9	chr14	-	3246	4	NNC	ENSMUSG00000060548.14	novel	1087	6	NA	NA	-6262	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.0083324654586	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTATGTGTCAAGTCAA	NA	False	NA	-3	True	AATAAA	-18	NA	61219596	61201300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61203915_61208277_61208681_61212038_61212204_61219532
ES.10917.1	chr14	-	234	1	Intergenic	novelGene_9132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTAAATTCAAACTAT	9524	False	NA	NA	False	NA	NA	NA	61361386	61361152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61361200_61361400
ES.10918.1	chr14	+	15208	9	NIC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.93700393700591	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTGGTTATTTTTA	NA	False	NA	17	True	AATAAA	-20	NA	61410429	61452948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440146
ES.10918.2	chr14	+	15150	9	NNC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.89259644769523	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGACTGGTTATTT	NA	False	NA	14	True	AATAAA	-17	NA	61410438	61452945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427152_61428546_61430042_61430836_61430929_61440146
ES.10918.3	chr14	+	3432	10	NNC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	18	-7537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4.81766297526196	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATATGTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	61410456	61470607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61469467_61469713_61469799
ES.10918.4	chr14	+	3241	9	NNC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	24	-7534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.65132727772866	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATATGTGCTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	61410462	61470610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61427050_61427198_61428546_61430042_61430836_61430929_61469543_61469713_61469799
ES.10918.5	chr14	+	8816	1	ISM	ENSMUSG00000048279.20	ENSMUST00000119943.8	14991	9	58207	423	12786	-423	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACTGTCTTTCAATATG	NA	False	NA	NA	False	NA	NA	NA	61443707	61452523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_61443700_61452500
ES.10919.1	chr14	+	181	1	Intergenic	novelGene_9133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGGGGGGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	61481332	61481513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61481300_61481500
ES.1092.1	chr1	+	1861	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAATCTAATTTTTGGT	NA	False	NA	NA	False	AGTAAA	-19	NA	95692182	95694043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_95692200_95694000
ES.10920.1	chr14	-	189	1	Intergenic	novelGene_9134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGACAATTAGACA	NA	False	NA	NA	False	NA	NA	NA	61485340	61485151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61485200_61485300
ES.10921.1	chr14	+	1622	2	FSM	ENSMUSG00000043157.9	ENSMUST00000055159.8	1482	2	-131	-9	-131	9	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGTGTGTGCATGTGT	NA	False	NA	NA	False	AATAAA	-27	NA	61547070	61549394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61547387_61548088
ES.10922.1	chr14	+	1530	3	Antisense	novelGene_ENSMUSG00000101505.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAATGGTTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	61549908	61552404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_61550599_61551492_61551767_61551838
ES.10923.1	chr14	+	1692	1	Intergenic	novelGene_9135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAAACCTCTGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	61592926	61594618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61592900_61594600
ES.10924.1	chr14	-	4514	3	NNC	ENSMUSG00000021928.10	novel	10092	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGCCTGTGGTCCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	61597846	61569190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61573457_61584820_61584891_61597668
ES.10924.2	chr14	-	1044	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	8	9040	8	-1017	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	61597880	61578230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ES.10924.3	chr14	-	866	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	-25	9251	-25	-1228	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGGGTGTGACTTAGT	NA	False	NA	-7	True	ATTAAA	-16	NA	61597913	61578441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ES.10924.4	chr14	-	6000	3	NIC	ENSMUSG00000021928.10	novel	10092	4	NA	NA	-16	-1230	intron_retention	FALSE	canonical	3	296	junction_1	22.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGGGGTGTGACTTA	NA	False	NA	-9	True	ATTAAA	-14	NA	61597904	61578443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61578854_61579536_61584891_61597668
ES.10924.5	chr14	-	3244	2	Genic_Genomic	ENSMUSG00000021928.10	novel	10092	4	NA	NA	7	-4451	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	61597881	61585750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_61586798_61595684
ES.10924.6	chr14	-	158	1	Intergenic	novelGene_9136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAATTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	61595453	61595295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61595300_61595500
ES.10925.1	chr14	+	3547	1	Antisense	novelGene_ENSMUSG00000021929.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-37	NA	61627030	61630577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_61627000_61630600
ES.10926.1	chr14	+	158	1	Intergenic	novelGene_9137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAATAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61637271	61637429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61637300_61637400
ES.10927.1	chr14	+	180	1	Intergenic	novelGene_9139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAACCTGAAAC	9125	False	NA	NA	False	NA	NA	NA	61657585	61657765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61657600_61657800
ES.10928.10	chr14	-	4168	16	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-227	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	159.771865135539	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6319	False	NA	-8	True	AATAAA	-26	NA	61677550	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.11	chr14	-	4064	16	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	157.770212651185	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6547	False	NA	-8	True	AATAAA	-26	NA	61677322	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628923_61629204_61629295_61640446_61640492_61677171
ES.10928.12	chr14	-	4132	18	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	193.598736019209	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6579	False	NA	-8	True	AATAAA	-26	NA	61677290	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61648541_61648634_61677171
ES.10928.16	chr14	-	4281	17	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-202	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	150.394156614378	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6344	False	NA	-8	True	AATAAA	-26	NA	61677525	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677165
ES.10928.18	chr14	-	4270	17	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-190	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	200.099350323783	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6356	False	NA	-8	True	AATAAA	-26	NA	61677513	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608318_61608425_61610406_61610536_61611732_61611871_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.19	chr14	-	4180	18	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-195	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	150.789594236817	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6351	False	NA	-8	True	AATAAA	-26	NA	61677518	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607880_61607967_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.2	chr14	-	5263	17	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	59	1262	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	154.03266698983	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGGTGTTGGGTAAC	6605	False	NA	NA	False	AATAGA	-17	NA	61677264	61601397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622560_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.21	chr14	-	3750	13	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	173.176852443455	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6596	False	NA	-12	True	AATAAA	-22	NA	61677273	61602659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61640446_61640492_61677171
ES.10928.23	chr14	-	4150	16	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	203.71007720669	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6445	False	NA	-12	True	AATAAA	-22	NA	61677424	61602659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628962_61629027_61629204_61629295_61640446_61640492_61677172
ES.10928.27	chr14	-	7922	16	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-201	-2	intron_retention	FALSE	canonical	2	379	junction_15	75.2953886739125	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACATTGAAAGACTTA	6345	False	NA	-14	True	AATAAA	-20	NA	61677524	61602661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.35	chr14	-	3865	14	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	19	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	166.397755446855	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGATAAAACATTGAAAGA	6565	False	NA	-18	True	AATAAA	-16	NA	61677304	61602665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61629204_61629295_61640446_61640492_61677171
ES.10928.37	chr14	-	3990	16	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	56	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	202.546411690972	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATGATAAAACATTGAA	6602	False	NA	-21	True	AATAAA	-13	NA	61677267	61602668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628923_61629204_61629295_61640446_61640492_61677177
ES.10928.38	chr14	-	4195	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-201	75	-201	-75	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTAAACGTGTTCCTAAT	6345	False	NA	-87	True	AAAAAG	-25	NA	61677524	61602734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.39	chr14	-	4158	17	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-172	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	198.523918190605	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATCTAAACGTGTTCCT	6374	False	NA	-90	True	AAAAAG	-22	NA	61677495	61602737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607837_61607995_61608150_61608223_61608318_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.4	chr14	-	4445	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-348	-28	-348	28	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTTAGCTTTGTTTT	6198	False	NA	16	True	GATAAA	-26	NA	61677671	61602631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.41	chr14	-	4060	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-318	327	-318	-327	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTCGCGTCTTAAG	6228	False	NA	0	True	ATTAAA	-27	NA	61677641	61602986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.43	chr14	-	3806	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-279	542	-279	-542	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGTAGTGTTCACTA	6267	False	NA	NA	False	NA	NA	NA	61677602	61603201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.44	chr14	-	3161	16	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-158	-1057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	202.546411690972	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTTGTTGCTCTTG	6388	False	NA	NA	False	ACTAAA	-19	NA	61677481	61603716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628923_61629204_61629295_61640446_61640492_61677172
ES.10928.45	chr14	-	3075	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-235	1229	-235	-1229	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAATGGTCTGCAGTTA	6311	False	NA	7	True	ATTAAA	-22	NA	61677558	61603888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.47	chr14	-	2431	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-203	1841	-203	-1841	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACCTACCATTAATTG	6343	False	NA	-1	True	ATTAAA	-23	NA	61677526	61604500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.48	chr14	-	1996	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	-169	2242	-169	-2242	multi-exon	FALSE	canonical	2	379	junction_16	73.5790391347971	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCATATGCATGATTTC	6377	False	NA	NA	False	NA	NA	NA	61677492	61604901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ES.10928.49	chr14	-	4889	1	Intergenic	novelGene_9138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAAGACAGGTTTTGG	3112	False	NA	NA	False	TATAAA	-44	NA	61653702	61648813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61648800_61653700
ES.10928.50	chr14	-	176	1	Intergenic	novelGene_9140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	61663360	61663184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61663200_61663400
ES.10928.8	chr14	-	4279	16	NNC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-205	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	157.770212651185	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6341	False	NA	-8	True	AATAAA	-26	NA	61677528	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628932_61629204_61629295_61640446_61640492_61677171
ES.10928.9	chr14	-	4244	16	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-201	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	157.549935646519	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	6345	False	NA	-8	True	AATAAA	-26	NA	61677524	61602655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61629204_61629295_61640446_61640492_61677171
ES.10929.1	chr14	+	189	1	Intergenic	novelGene_9141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCTAGATACTCTCA	NA	False	NA	NA	False	NA	NA	NA	61703915	61704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61703900_61704100
ES.1093.1	chr1	-	982	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAAGTCTCATTCTTG	NA	False	NA	NA	False	TATAAA	-14	NA	95759471	95758489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_95758500_95759500
ES.10930.1	chr14	+	181	1	Intergenic	novelGene_9143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACAAGGTCCCATTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	61782349	61782530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61782300_61782500
ES.10931.1	chr14	-	4099	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	138	-235	10	235	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTCTTGACTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	61794197	61769206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.11	chr14	-	693	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	234	3075	106	-763	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTCGAACACATGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	61794101	61772516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.12	chr14	-	175	1	Intergenic	novelGene_9142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGTCTTCATAACATA	NA	False	NA	NA	False	NA	NA	NA	61778171	61777996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61778000_61778200
ES.10931.2	chr14	-	2159	5	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	96	715	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	61.8117100556197	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATATATAGAATTCAGAC	NA	False	NA	NA	False	CATAAA	-18	NA	61794111	61771038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61772691_61783130_61783298_61787192_61787310_61792219_61792301_61793969
ES.10931.3	chr14	-	2009	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	109	1884	-19	428	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTTTCATGGTGTCTT	NA	False	NA	3	True	AATAAA	-24	NA	61794226	61771325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.4	chr14	-	2075	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	-37	420	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	71.0278818493132	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCAGTGATTTTCAT	NA	False	NA	-5	True	AATAAA	-16	NA	61794244	61771333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61772691_61776533_61776590_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.5	chr14	-	1656	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	108	2238	-20	74	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGTCTTCATGGTCTT	NA	False	NA	NA	False	NA	NA	NA	61794227	61771679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.6	chr14	-	1608	6	NNC	ENSMUSG00000021930.15	novel	4002	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	71.0278818493132	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCAGTATTATATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	61794197	61771753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61772691_61776533_61776590_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.7	chr14	-	1179	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	148	2675	20	-363	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTTCTTTTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	61794187	61772116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10931.8	chr14	-	917	4	FSM	ENSMUSG00000021930.15	ENSMUST00000100496.5	1459	4	1	541	1	-541	multi-exon	FALSE	canonical	3	20	junction_1	60.8075287736277	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAATTGAGTGATTATTT	NA	False	NA	-5	True	TATAAA	-44	NA	61794206	61772294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61783130_61783298_61787192_61787310_61793969
ES.10931.9	chr14	-	1039	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	109	2854	-19	-542	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAATTGAGTGATTATT	NA	False	NA	-6	True	TATAAA	-43	NA	61794226	61772295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ES.10932.1	chr14	-	590	1	Intergenic	novelGene_9144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAACCCAAATACAAGCA	NA	False	NA	NA	False	NA	NA	NA	61798169	61797579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61797600_61798200
ES.10933.1	chr14	+	174	2	Genic_Genomic	ENSMUSG00000098088.2	novel	352	2	NA	NA	-59708	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	2054	False	NA	NA	False	NA	NA	NA	61807224	61867860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_61807255_61867716
ES.10933.10	chr14	+	1659	3	NNC	ENSMUSG00000035235.14	novel	1550	3	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	103	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	False	NA	15	True	AATAAA	-13	NA	61837010	61843392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_61837154_61837242_61837345_61841978
ES.10933.11	chr14	+	6360	1	NIC	ENSMUSG00000035235.14	novel	1619	3	NA	NA	43	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGCCTGAGTTTGTGC	NA	False	NA	14	True	AATAAA	-12	NA	61837031	61843391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_61837000_61843400
ES.10933.12	chr14	+	3317	1	Antisense	novelGene_ENSMUSG00000097589.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGTTCTCCATTATG	NA	False	NA	NA	False	NA	NA	NA	61857191	61860508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_61857200_61860500
ES.10933.13	chr14	+	178	1	Antisense	novelGene_ENSMUSG00000098183.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATACTTGGCAC	1889	False	NA	NA	False	NA	NA	NA	61863569	61863747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_61863600_61863700
ES.10933.14	chr14	+	4311	1	FSM	ENSMUSG00002075574.1	ENSMUST00020182777.1	114	1	-2969	-1228	-2969	1228	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTTCCTTTGAAATAA	1892	False	NA	NA	False	NA	NA	NA	61863572	61867883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61863600_61867900
ES.10933.2	chr14	+	1666	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-50	3	-50	-3	multi-exon	FALSE	canonical	3	46	junction_1	100	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	False	NA	15	True	AATAAA	-13	NA	61835645	61843392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61835796_61837242_61837345_61841978
ES.10933.3	chr14	+	6263	2	ISM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	-13	3	-13	-3	intron_retention	FALSE	canonical	3	46	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	False	NA	15	True	AATAAA	-13	NA	61835682	61843392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_61835796_61837242
ES.10933.4	chr14	+	4385	4	Fusion	ENSMUSG00000046168.10_ENSMUSG00000035235.14	novel	1619	3	NA	NA	-6	-537	multi-exon	FALSE	canonical	1	1	junction_3	106.484218966422	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTCTCCAGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	61835689	61849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_61835796_61837242_61837345_61841978_61845522_61849100
ES.10933.5	chr14	+	1390	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	54	175	54	-175	multi-exon	FALSE	canonical	3	46	junction_1	100	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTTCTGCTTCTTGAT	NA	False	NA	NA	False	TATAAA	-12	NA	61835749	61843220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61835796_61837242_61837345_61841978
ES.10933.6	chr14	+	1589	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	-42	3	-42	-3	multi-exon	FALSE	canonical	3	148	junction_1	49	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	False	NA	15	True	AATAAA	-13	NA	61836946	61843392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_61837020_61837242_61837345_61841978
ES.10933.7	chr14	+	6207	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	-30	7	-30	-7	intron_retention	FALSE	canonical	3	148	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAAATTGCCTGAGTTTG	NA	False	NA	11	True	AATAAA	-9	NA	61836958	61843388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_61837020_61837242
ES.10933.9	chr14	+	1750	2	ISM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	1313	3	20	-3	3prime_fragment	FALSE	canonical	3	246	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	False	NA	15	True	AATAAA	-13	NA	61837008	61843392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_61837345_61841978
ES.10934.1	chr14	-	279	1	Intergenic	novelGene_9145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTATCACTTATTAAT	NA	False	NA	NA	False	AATAGA	-11	NA	61832235	61831956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61832000_61832200
ES.10935.1	chr14	-	136	1	Intergenic	novelGene_9146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	61833301	61833165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61833200_61833300
ES.10936.1	chr14	-	789	5	FSM	ENSMUSG00000097589.10	ENSMUST00000182325.8	463	5	26	-352	1	100	multi-exon	FALSE	canonical	1	2	junction_1	6.28490254498827	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACTCATTTTATCA	NA	False	NA	NA	False	NA	NA	NA	61886210	61840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61841256_61869885_61869933_61872973_61873041_61880808_61880905_61886066
ES.10936.10	chr14	-	3609	3	FSM	ENSMUSG00000097589.10	ENSMUST00000182286.2	666	3	-14	-2929	-3	1	multi-exon	FALSE	canonical	0	0	junction_2	9.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTTTCTGTACGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	61919777	61869746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61873041_61880808_61880905_61919558
ES.10936.11	chr14	-	4119	1	FSM	ENSMUSG00000102151.2	ENSMUST00000192342.2	4052	1	1382	-1449	1382	1449	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGTATAACACTATCCTA	NA	False	NA	NA	False	NA	NA	NA	61917561	61913442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61913400_61917600
ES.10936.2	chr14	-	1372	1	Antisense	novelGene_ENSMUSG00000046168.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGAATCCAATGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	61845194	61843822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_61843800_61845200
ES.10936.3	chr14	-	5866	5	NNC	ENSMUSG00000097589.10	novel	1165	7	NA	NA	1	98	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATAGGACTAAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	61869340	61856823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61860238_61863495_61863563_61863760_61864210_61867195_61867679_61867887
ES.10936.4	chr14	-	3389	1	FSM	ENSMUSG00000097589.10	ENSMUST00000191650.2	1557	1	-3043	1211	-3043	67	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	61860243	61856854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61856900_61860200
ES.10936.5	chr14	-	6438	3	Fusion	ENSMUSG00000098183.2_ENSMUSG00000097589.10	novel	863	2	NA	NA	1	136	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTTGTGATTGGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	61869340	61862495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_61863563_61863760_61867679_61867887
ES.10936.6	chr14	-	4012	1	FSM	ENSMUSG00000097589.10	ENSMUST00000193208.2	4098	1	2833	-2747	2833	135	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTGTTTGTGATTGGAA	NA	False	NA	NA	False	AATAAA	-13	NA	61866508	61862496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61862500_61866500
ES.10936.7	chr14	-	3288	1	FSM	ENSMUSG00000097589.10	ENSMUST00000193208.2	4098	1	1	809	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTGTATGTTTCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	61869340	61866052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61866100_61869300
ES.10936.8	chr14	-	3079	2	NNC	ENSMUSG00000097589.10	novel	637	5	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTGTATGTTTCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	61869340	61866052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_61867679_61867887
ES.10936.9	chr14	-	3601	3	FSM	ENSMUSG00000097589.10	ENSMUST00000180917.9	3544	3	36	-93	1	43	multi-exon	FALSE	canonical	2	7	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTATTCTGCTGAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	61886235	61869704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_61873041_61880808_61880905_61886066
ES.10937.1	chr14	-	153	1	Intergenic	novelGene_9147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACATCAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	61941490	61941337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61941300_61941500
ES.10938.1	chr14	+	975	4	Intergenic	novelGene_9148	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTCATCAGTGTCAAAAT	4872	False	NA	NA	False	TATAAA	-18	NA	61964779	62002573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61964909_61999327_61999430_61999682_61999806_62001952
ES.10938.2	chr14	+	766	3	Intergenic	novelGene_9150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCACTCGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	61975744	62054066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_61975908_61978027_61978177_62053612
ES.10939.1	chr14	-	84	1	Intergenic	novelGene_9149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCGTTTCTTGTGGATG	NA	False	NA	NA	False	NA	NA	NA	61972249	61972165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_61972200_61972200
ES.1094.1	chr1	-	231	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTTTATGTAGTCA	7406	False	NA	NA	False	NA	NA	NA	96549317	96549086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_96549100_96549300
ES.10940.1	chr14	-	230	1	Intergenic	novelGene_9151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTATAAAGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	62078293	62078063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_62078100_62078300
ES.10941.1	chr14	+	2972	1	Intergenic	novelGene_9152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62079724	62082696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_62079700_62082700
ES.10942.1	chr14	-	131	1	Intergenic	novelGene_9153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAAAAGTAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	62325470	62325339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_62325300_62325500
ES.10943.1	chr14	+	163	1	Intergenic	novelGene_9154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	62456758	62456921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_62456800_62456900
ES.10944.1	chr14	+	1114	11	NIC	ENSMUSG00000021932.14	novel	362	5	NA	NA	-149	-486	combination_of_known_junctions	TRUE	canonical	2	10	junction_1	256.284704966957	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTGCCTCTTGCCTA	NA	False	NA	10	True	AATAAA	-19	NA	62529888	62609955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62530104_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.10	chr14	+	1093	12	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	317.681658840476	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTGCCTCTTGCCTA	NA	False	NA	10	True	AATAAA	-19	NA	62569541	62609955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62608801_62608912_62609808
ES.10944.11	chr14	+	1742	12	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	25	5562	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	247.149702016028	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTTGTGCAATATGT	NA	False	NA	NA	False	TATAAA	-16	NA	62569541	62616003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808_62610044_62615332
ES.10944.12	chr14	+	1362	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	2	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATAGTTTTGTTGCTTT	NA	False	NA	7	True	AATAAA	-19	NA	62569542	62610443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.13	chr14	+	1261	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	-99	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	-10	True	NA	NA	NA	62569542	62610342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.14	chr14	+	1317	9	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	5562	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	317.824415951638	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTTGTGCAATATGT	NA	False	NA	NA	False	TATAAA	-16	NA	62569542	62616003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62615332
ES.10944.15	chr14	+	5119	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	2	intron_retention	FALSE	canonical	3	753	junction_1	49.7160688309122	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATAGTTTTGTTGCTTT	NA	False	NA	7	True	AATAAA	-19	NA	62569542	62610443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.16	chr14	+	937	11	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	26	-490	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.549995070006	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAACTTGCCTCTTG	NA	False	NA	6	True	AATAAA	-15	NA	62569542	62609951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62586010_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.17	chr14	+	4628	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-23	-481	intron_retention	FALSE	canonical	3	753	junction_1	49.7160688309122	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569550	62609960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.18	chr14	+	2776	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	35	490	-22	-490	intron_retention	FALSE	canonical	3	538	junction_2	119.060623628324	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAACTTGCCTCTTG	NA	False	NA	6	True	AATAAA	-15	NA	62569551	62609951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ES.10944.19	chr14	+	4741	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-20	-490	intron_retention	FALSE	canonical	0	0	junction_7	348.376162527352	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAACTTGCCTCTTG	NA	False	NA	6	True	AATAAA	-15	NA	62569553	62609951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62606041_62606167_62607920_62608002_62609808
ES.10944.2	chr14	+	1587	11	NIC	ENSMUSG00000021932.14	novel	362	5	NA	NA	-137	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	256.284704966957	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCATAGTTTTGTTGC	NA	False	NA	4	True	AATAAA	-16	NA	62529900	62610440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62530104_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.20	chr14	+	2858	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-18	-490	intron_retention	FALSE	canonical	2	20	junction_6	262.342627723723	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAACTTGCCTCTTG	NA	False	NA	6	True	AATAAA	-15	NA	62569555	62609951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62598063_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ES.10944.21	chr14	+	1037	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-12	-2111	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	201.905879991148	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGCGTTCTCCTGCAG	NA	False	NA	NA	False	AATAAA	-18	NA	62569561	62608330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ES.10944.23	chr14	+	3326	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	1	-74	intron_retention	FALSE	canonical	2	20	junction_5	258.189422280964	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAATCTTGCCCCTTTCC	NA	False	NA	15	True	AATAAA	-17	NA	62569574	62610367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62586078_62587848_62587926_62590971_62591087_62597911_62598063_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.24	chr14	+	1320	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	263.056394460706	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATAGTTTTGTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	62569575	62610441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.25	chr14	+	3657	7	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	963	-484	intron_retention	FALSE	canonical	3	774	junction_6	47.6818157745231	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCCTCTTGCCTATT	NA	False	NA	12	True	AATAAA	-21	NA	62585710	62609957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62587926_62590971_62591087_62597911_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.26	chr14	+	913	6	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	28393	99	13162	-99	3prime_fragment	FALSE	canonical	3	774	junction_5	50.0903184258196	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	-10	True	NA	NA	NA	62597909	62610342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.3	chr14	+	2846	10	NIC	ENSMUSG00000021932.14	novel	362	5	NA	NA	-78	-490	intron_retention	FALSE	canonical	2	10	junction_1	268.91055927369	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAACTTGCCTCTTG	NA	False	NA	6	True	AATAAA	-15	NA	62529959	62609951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62530104_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920
ES.10944.4	chr14	+	3387	10	NNC	ENSMUSG00000021932.14	novel	362	5	NA	NA	-71	-99	intron_retention	FALSE	canonical	2	10	junction_1	337.846703493949	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	-10	True	NA	NA	NA	62529966	62610342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62530104_62584016_62586078_62587848_62587926_62590971_62591087_62597911_62598063_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.5	chr14	+	1020	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	-10	484	-10	-484	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCCTCTTGCCTATT	NA	False	NA	12	True	AATAAA	-21	NA	62569506	62609957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.6	chr14	+	1499	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	-3	-2	-3	2	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATAGTTTTGTTGCTTT	NA	False	NA	7	True	AATAAA	-19	NA	62569513	62610443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.7	chr14	+	903	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	-3	-486	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTGCCTCTTGCCTA	NA	False	NA	10	True	AATAAA	-19	NA	62569513	62609955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10944.8	chr14	+	1509	11	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	23	5562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	258.45432865402	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTTGTGCAATATGT	NA	False	NA	NA	False	TATAAA	-16	NA	62569539	62616003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62615332
ES.10944.9	chr14	+	1371	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	24	99	24	-99	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATCAATAAAA	NA	False	NA	-10	True	NA	NA	NA	62569540	62610342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ES.10945.1	chr14	-	1590	2	FSM	ENSMUSG00000048281.10	ENSMUST00000063169.10	1314	2	-271	-5	-187	5	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCTTCTCTTACTGACT	396	False	NA	NA	False	ATTAAA	-18	NA	62530683	62513674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_62514558_62529976
ES.10946.1	chr14	-	4103	1	Intergenic	novelGene_9155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTGGTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	62569434	62565331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_62565300_62569400
ES.10947.1	chr14	+	3571	4	FSM	ENSMUSG00000035184.16	ENSMUST00000039064.8	3558	4	-16	3	-16	-3	multi-exon	TRUE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGCTGAGTTGCAATC	NA	False	NA	NA	False	NA	NA	NA	62793169	62845932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_62793364_62801936_62801969_62824601_62825336_62843321
ES.10948.1	chr14	+	4983	1	NIC	ENSMUSG00000091155.2	novel	1402	9	NA	NA	16348	-7246	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62917463	62922446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_62917500_62922400
ES.10949.1	chr14	-	5031	19	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	1	10	intron_retention	FALSE	canonical	3	4	junction_1	115.455258289377	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTATTCTTTGTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	62998586	62913768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.10	chr14	-	7340	4	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1621	-3605	intron_retention	FALSE	canonical	3	165	junction_3	176.352550937666	558	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAATCATTCCTGTGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	62940726	62926857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109
ES.10949.11	chr14	-	6373	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-4509	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTTGGCTTGATTTTT	NA	False	NA	1	True	AATAAA	-30	NA	62998587	62927761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.12	chr14	-	6417	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	15	-4511	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCACCTTGGCTTGATTT	NA	False	NA	-1	True	AATAAA	-28	NA	62998603	62927763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.13	chr14	-	7906	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-4513	intron_retention	FALSE	canonical	3	358	junction_3	52.7458158885612	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCCACCTTGGCTTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	62998586	62927765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.16	chr14	-	6620	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-4514	intron_retention	FALSE	canonical	3	18	junction_14	145.868239208803	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCACCTTGGCTTGA	NA	False	NA	-4	True	AATAAA	-25	NA	62998586	62927766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.17	chr14	-	5750	16	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	17136	-4514	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	169.959001592214	561	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCACCTTGGCTTGA	3082	False	NA	-4	True	AATAAA	-25	NA	62981425	62927766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357
ES.10949.19	chr14	-	5933	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-4517	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.27942346343	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGGTCCACCTTGGCT	NA	False	NA	-7	True	AATAAA	-22	NA	62998586	62927769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996_62998083_62998543
ES.10949.2	chr14	-	4874	19	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	1	-117	intron_retention	FALSE	canonical	3	4	junction_1	129.875533958431	567	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTGTTTGATTGGGTT	NA	False	NA	NA	False	NA	NA	NA	62998586	62913895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.22	chr14	-	5918	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	134	-4837	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.956563467456	564	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTCTTAGTGACCAG	NA	False	NA	NA	False	NA	NA	NA	62998427	62928089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939966_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.23	chr14	-	4799	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-6082	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	562	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	62998586	62929334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.24	chr14	-	4732	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-6180	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGGAAGTAAATGAAGATA	NA	False	NA	NA	False	ATTAAA	-23	NA	62998587	62929432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.25	chr14	-	4952	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-6182	intron_retention	FALSE	canonical	3	18	junction_14	145.868239208803	562	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTGGAAGTAAATGAAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	62998586	62929434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.27	chr14	-	4693	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-6188	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	562	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAATTTCTGGAAGTAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	62998586	62929440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.28	chr14	-	3997	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-6914	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATGAGTTGGGGCATTA	NA	False	NA	NA	False	TTTAAA	-14	NA	62998586	62930166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.29	chr14	-	3857	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7055	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCTTTTTAACTATTA	NA	False	NA	NA	False	NA	NA	NA	62998587	62930307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.3	chr14	-	3986	20	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	1	-1258	intron_retention	FALSE	canonical	3	4	junction_1	168.922608449637	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	62998586	62915036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.30	chr14	-	7862	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7083	intron_retention	FALSE	canonical	3	165	junction_3	85.7582904155627	559	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGTAATTATATGTTAC	NA	False	NA	NA	False	ATTAAA	-27	NA	62998586	62930335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.32	chr14	-	3785	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7096	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	559	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTGTTAAACTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	62998586	62930348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.34	chr14	-	3953	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7151	intron_retention	FALSE	canonical	3	18	junction_14	156.302502290342	559	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACAATGGAATTTTAAA	NA	False	NA	48	True	TTTAAA	-21	NA	62998586	62930403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.35	chr14	-	3713	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7199	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTTTAGGAAATAATCA	NA	False	NA	0	True	AATAAA	-19	NA	62998587	62930451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.36	chr14	-	3934	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7201	intron_retention	FALSE	canonical	3	18	junction_14	145.868239208803	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGGTTTAGGAAATAAT	NA	False	NA	-2	True	AATAAA	-17	NA	62998587	62930453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.37	chr14	-	4370	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7201	intron_retention	FALSE	canonical	3	358	junction_3	51.7904054217574	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGGTTTAGGAAATAAT	NA	False	NA	-2	True	AATAAA	-17	NA	62998586	62930453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.4	chr14	-	3814	19	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	-20	-1259	intron_retention	FALSE	canonical	3	4	junction_1	115.455258289377	567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	62998638	62915037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.40	chr14	-	7771	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7204	intron_retention	FALSE	canonical	3	358	junction_3	53.1721481957425	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGGTTTAGGAAAT	NA	False	NA	-5	True	AATAAA	-14	NA	62998586	62930456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.41	chr14	-	3707	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7205	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	558	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998617	62930457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.42	chr14	-	7740	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7205	intron_retention	FALSE	canonical	3	165	junction_3	85.7582904155627	558	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998586	62930457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.43	chr14	-	7380	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7206	intron_retention	FALSE	canonical	3	362	junction_13	47.2469823771847	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998586	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.44	chr14	-	3556	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7206	intron_retention	FALSE	canonical	0	0	junction_15	123.021069714704	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998587	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62997614_62997693_62997996
ES.10949.45	chr14	-	3341	6	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-24	-7206	intron_retention	FALSE	canonical	3	165	junction_3	141.748509692342	552	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62942371	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62939963_62940622_62940750_62942132
ES.10949.47	chr14	-	3844	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7206	intron_retention	FALSE	canonical	0	0	junction_11	118.878117920899	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998587	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947208_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.48	chr14	-	5346	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7206	intron_retention	FALSE	canonical	3	358	junction_3	52.1889221363116	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998586	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.49	chr14	-	3722	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-2	-7206	intron_retention	FALSE	canonical	0	0	junction_14	133.5704005501	558	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTGTGGTTTAGGAA	NA	False	NA	-7	True	AATAAA	-12	NA	62998563	62930458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953988_62981343_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.5	chr14	-	3729	19	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	2	-1260	intron_retention	FALSE	non_canonical	0	0	junction_1	130.590491779493	567	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAATGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	62998580	62915038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915621_62930980_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.50	chr14	-	9410	16	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7207	intron_retention	FALSE	canonical	3	358	junction_3	53.218042053424	558	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTGTGGTTTAGGA	NA	False	NA	-8	True	AATAAA	-11	NA	62998587	62930459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62945149_62946339_62946473_62946916_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.51	chr14	-	3576	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7306	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTATTTTGGATATAT	NA	False	NA	-107	True	ATTAAA	-22	NA	62998587	62930558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.52	chr14	-	3602	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7310	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACAGTTATTTTGGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	62998587	62930562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.53	chr14	-	5018	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7372	intron_retention	FALSE	canonical	3	165	junction_3	86.0921562919643	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTACTTTGTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	62998587	62930624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.55	chr14	-	5794	1	NIC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	5929	-7372	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTACTTTGTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	62936418	62930624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_62930600_62936400
ES.10949.58	chr14	-	3524	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	2	-7379	intron_retention	FALSE	non_canonical	0	0	junction_2	116.316505328198	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAAGTTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	62998580	62930631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933236_62934037_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.59	chr14	-	13374	16	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7379	intron_retention	FALSE	canonical	3	18	junction_11	157.452158518777	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAAGTTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	62998586	62930631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62951292_62951741_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.6	chr14	-	3826	20	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	1	-1263	intron_retention	FALSE	canonical	0	0	junction_12	172.539352771615	567	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATAATGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	62998586	62915041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62947139_62947208_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.61	chr14	-	3382	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7379	intron_retention	FALSE	canonical	0	0	junction_15	123.021069714704	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAAGTTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	62998586	62930631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62997614_62997693_62997996
ES.10949.62	chr14	-	4316	2	NIC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	6600	-7379	intron_retention	FALSE	canonical	3	544	junction_1	0	551	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAAGTTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	62935747	62930631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_62933242_62934041
ES.10949.63	chr14	-	7541	17	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7405	intron_retention	FALSE	canonical	3	165	junction_3	85.7582904155627	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAGAA	NA	False	NA	NA	False	TTTAAA	-32	NA	62998587	62930657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.64	chr14	-	3700	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7405	intron_retention	FALSE	canonical	3	18	junction_14	156.302502290342	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAGAA	NA	False	NA	NA	False	TTTAAA	-32	NA	62998587	62930657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.65	chr14	-	3377	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7504	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTGTCATTGGCTCT	NA	False	NA	NA	False	ACTAAA	-16	NA	62998586	62930756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.66	chr14	-	3414	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-6	-7504	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTGTCATTGGCTCT	NA	False	NA	NA	False	ACTAAA	-16	NA	62998593	62930756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.67	chr14	-	3499	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7636	intron_retention	FALSE	canonical	3	18	junction_14	145.868239208803	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTACAGTGCCCTTTT	NA	False	NA	65	True	ACTAAA	-23	NA	62998587	62930888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.68	chr14	-	3314	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-9	-7638	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTTTACAGTGCCCTT	NA	False	NA	63	True	ACTAAA	-21	NA	62998627	62930890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.69	chr14	-	3275	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7638	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTTTACAGTGCCCTT	NA	False	NA	63	True	ACTAAA	-21	NA	62998618	62930890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.7	chr14	-	3766	1	Genic_Genomic	ENSMUSG00000035161.8	novel	NA	NA	NA	NA	16881	1552	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCAGTGGTCTGATG	NA	False	NA	NA	False	ACTAAA	-13	NA	62925466	62921700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_62921700_62925500
ES.10949.74	chr14	-	7150	9	NIC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-3766	-7718	intron_retention	FALSE	canonical	3	358	junction_3	57.5704731177363	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTAATCTTGTATT	NA	False	NA	-17	True	AGTAAA	-6	NA	62950234	62930970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916
ES.10949.77	chr14	-	3384	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-7720	intron_retention	FALSE	canonical	3	18	junction_14	156.302502290342	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTTGTAATCTTGTA	NA	False	NA	-19	True	AGTAAA	-4	NA	62998586	62930972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.78	chr14	-	3015	11	ISM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	50286	7726	-1807	-7726	3prime_fragment	FALSE	canonical	3	358	junction_3	55.7064628207536	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAGACTGTTGTAAT	NA	False	NA	-25	True	AATACA	-5	NA	62948275	62930978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916
ES.10949.79	chr14	-	3157	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7755	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	557	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATTGTCTTCTCCAA	NA	False	NA	-54	True	ATTAAA	-22	NA	62998587	62931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.8	chr14	-	10879	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	567	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACTGTGTCATTGAGT	NA	False	NA	NA	False	TTTAAA	-3	NA	62998586	62923254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.80	chr14	-	3121	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7761	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTATTTCATTGTCTT	NA	False	NA	-60	True	ATTAAA	-16	NA	62998587	62931013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.81	chr14	-	3065	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	-1	-7779	intron_retention	FALSE	canonical	0	0	junction_16	119.393826528631	557	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAATAGAATGAGGC	NA	False	NA	-78	True	NA	NA	NA	62998562	62931031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997657_62997693_62997996
ES.10949.82	chr14	-	2949	16	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	2	5768	intron_retention	FALSE	canonical	0	0	junction_9	119.016338747623	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCCGAAGAGAATATACCA	NA	False	NA	NA	False	AATAAA	-8	NA	62998580	62934170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947208_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.83	chr14	-	2842	12	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	2087	intron_retention	FALSE	canonical	3	18	junction_7	169.442449821917	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGCTTTAAAAGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	62998587	62942551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ES.10949.84	chr14	-	4800	1	Intergenic	novelGene_9156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAAAGGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	62990654	62985854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_62985900_62990700
ES.10949.85	chr14	-	3917	2	Intergenic	novelGene_9157	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAAGTAAAATGGGCTTG	NA	False	NA	NA	False	NA	NA	NA	62994665	62990527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_62991782_62992002
ES.10949.86	chr14	-	3268	2	NIC	ENSMUSG00000035161.8	novel	2402	3	NA	NA	1	47	intron_retention	FALSE	canonical	3	422	junction_1	0	490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAAACATGCTTCTGG	NA	False	NA	NA	False	AATAAA	-31	NA	62998586	62995014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_62997693_62997996
ES.10949.9	chr14	-	6430	3	ISM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	64435	1620	8221	-1620	3prime_fragment	FALSE	canonical	3	534	junction_1	5	560	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGAGGTTTTTCCTG	NA	False	NA	NA	False	AATGAA	-9	NA	62934126	62924872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_62931124_62933147_62933242_62934041
ES.1095.1	chr1	-	4613	12	NIC	ENSMUSG00000040693.8	novel	4908	13	NA	NA	34	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	7.27727130770527	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTACTCTTTATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	96799862	96743991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96799491
ES.1095.3	chr1	-	4881	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	27	0	27	0	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTTATTACTCTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	96799869	96743994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
ES.1095.4	chr1	-	6271	3	ISM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	45174	6	45174	-6	3prime_fragment	FALSE	canonical	3	12	junction_2	3.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTACACTGTTTTATTAC	NA	False	NA	NA	False	ATTAAA	-12	NA	96754722	96744000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_96746833_96748907_96749046_96751421
ES.1095.5	chr1	-	4372	11	NIC	ENSMUSG00000040693.8	novel	4908	13	NA	NA	41	-35	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	8.17312669668102	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTATAATTTTTATTAAATC	NA	False	NA	NA	False	NA	NA	NA	96799855	96744029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96799491
ES.1095.6	chr1	-	4743	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	34	131	34	-131	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACATTTGACTTTGC	NA	False	NA	NA	False	AATAAA	-32	NA	96799862	96744125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
ES.10950.1	chr14	-	174	1	Intergenic	novelGene_9158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATGAGGGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	63013737	63013563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63013600_63013700
ES.10951.1	chr14	+	1818	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	9	4819	9	-4819	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTCTCCTCGTTCTTGC	NA	False	NA	NA	False	AAAAAG	-37	NA	63075135	63194139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.10	chr14	+	1365	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	352	4929	316	-4929	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTGTGGATGTTTA	NA	False	NA	NA	False	NA	NA	NA	63075478	63194029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.11	chr14	+	3820	1	Intergenic	novelGene_9159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63093548	63097368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63093500_63097400
ES.10951.12	chr14	+	5572	4	ISM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	114235	2	114199	-2	3prime_fragment	FALSE	canonical	3	23	junction_1	4.49691252107735	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63189361	63198956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.2	chr14	+	6637	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	9	0	9	0	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTTGTATCCTTGTCA	NA	False	NA	22	True	AATAAA	-22	NA	63075135	63198958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.3	chr14	+	6498	11	NIC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	15	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	11.8747631555328	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTCAGTTGTATCC	NA	False	NA	16	True	AATAAA	-16	NA	63075141	63198952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.4	chr14	+	1624	10	NNC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	-8	32195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.1360599297006	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	63075154	63231153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63230677
ES.10951.5	chr14	+	6547	11	NNC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	13.0368707901858	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63075154	63198956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63075507_63123258_63123327_63162578_63162634_63167676_63167828_63171733_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.6	chr14	+	7608	11	NIC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	28	junction_9	4.93558507170123	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63075157	63198956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63190592_63192309_63192419_63193728
ES.10951.7	chr14	+	6338	10	NIC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.8018621673566	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTATCTCAGTTGTATCC	NA	False	NA	16	True	AATAAA	-16	NA	63075164	63198952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.8	chr14	+	4005	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	38	2603	2	-2603	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTTCTCGTTTAGTT	NA	False	NA	NA	False	TATAAA	-15	NA	63075164	63196355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ES.10951.9	chr14	+	6290	9	NIC	ENSMUSG00000014547.11	novel	6646	12	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	14.5209977274291	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCAGTTGTATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63075166	63198956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63075507_63123258_63123327_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63193728
ES.10952.1	chr14	-	2097	1	Intergenic	novelGene_9160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCAGAGACTAGATAGTA	8772	False	NA	NA	False	NA	NA	NA	63127751	63125654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63125700_63127800
ES.10953.1	chr14	-	173	1	Intergenic	novelGene_9161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCACTCTACCTT	NA	False	NA	NA	False	NA	NA	NA	63219252	63219079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63219100_63219300
ES.10954.1	chr14	-	192	1	Intergenic	novelGene_9162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATATGACTAGAATTGT	5761	False	NA	NA	False	NA	NA	NA	63239761	63239569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63239600_63239800
ES.10955.1	chr14	+	552	4	NIC	ENSMUSG00000054763.10	novel	618	3	NA	NA	-34	-10	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	14.3527000944073	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATAAATTTCCCGTTT	NA	False	NA	18	True	AATAAA	-27	NA	63284405	63286049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63284500_63284892_63285068_63285676_63285752_63285841
ES.10955.2	chr14	+	1638	1	Genic_Genomic	ENSMUSG00000054763.10	novel	NA	NA	NA	NA	-28	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATAAATTTCCCGTTT	NA	False	NA	18	True	AATAAA	-27	NA	63284411	63286049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_63284400_63286000
ES.10955.3	chr14	+	2727	4	NNC	ENSMUSG00000054763.10	novel	1909	4	NA	NA	-22	2	intron_retention	FALSE	canonical	0	0	junction_3	17.1464281994822	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGAGTCCGGGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	63284417	63295600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63284500_63284892_63285068_63285676_63285762_63293215
ES.10956.1	chr14	-	661	3	FSM	ENSMUSG00000075571.9	ENSMUST00000111209.2	721	3	59	1	59	-1	multi-exon	FALSE	canonical	2	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCGAAGTATTGAGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	63287345	63271922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63272277_63273378_63273551_63287210
ES.10957.1	chr14	+	621	1	Intergenic	novelGene_9163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGGTATCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	63314242	63314863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63314200_63314900
ES.10958.1	chr14	+	3526	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-42	1294	intron_retention	FALSE	canonical	3	6333	junction_1	614.086605760946	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGCAGTTTCAAGGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	63359868	63380606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.10	chr14	+	3567	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	8	1168	8	-1168	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTCTTATTTGCTAA	NA	False	NA	17	True	TATAAA	-27	NA	63359918	63382204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.11	chr14	+	1966	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	8	1310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2344.2559955857	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTCTCTCCCCCTGG	NA	False	NA	5	True	NA	NA	NA	63359918	63380622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379699
ES.10958.12	chr14	+	1823	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	9	1269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGGCAGGGTGCACG	NA	False	NA	23	True	AATAAA	-18	NA	63359919	63380581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63380189_63380308
ES.10958.13	chr14	+	1942	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	10	1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2965.53763928229	2606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTGCTTTTTG	NA	False	NA	-67	True	AATGAA	-11	NA	63359920	63380491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.15	chr14	+	1944	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	10	1291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2336.48131034259	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359920	63380603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376571_63379208_63379312_63379680
ES.10958.16	chr14	+	4573	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	11	159	11	-159	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGTTGGCCTCAGGTA	NA	False	NA	NA	False	CATAAA	-19	NA	63359921	63383213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.19	chr14	+	3650	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	12	-1171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2965.53763928229	2613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGGGTCTTATTTGC	NA	False	NA	14	True	TATAAA	-24	NA	63359922	63382201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.2	chr14	+	2021	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	-31	2753	-31	1307	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTTTTGTCTCTCCCCC	NA	False	NA	2	True	NA	NA	NA	63359879	63380619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.21	chr14	+	1953	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	20	1293	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2369.69959548452	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAGTTTCAAGGCT	NA	False	NA	-12	True	AATAAA	-42	NA	63359930	63380605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360022_63370774_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.22	chr14	+	5905	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	23	-1177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2336.48131034259	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGAACTTGGGGTCTT	NA	False	NA	8	True	TATAAA	-18	NA	63359933	63382195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376710_63376965_63379312_63379680
ES.10958.23	chr14	+	1820	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-22	1176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2344.2559955857	2606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAAAAAACTTGCTTT	NA	False	NA	-70	True	AATGAA	-8	NA	63359940	63380488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379303_63379680
ES.10958.24	chr14	+	4798	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2965.53763928229	2613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACTGGTTTTCCTGTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	63359940	63383367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.25	chr14	+	4286	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-21	1272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2336.48131034259	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCAGGGTGCACGGTT	NA	False	NA	26	True	AATAAA	-21	NA	63359941	63380584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376710_63376965_63379312_63379680
ES.10958.26	chr14	+	1904	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-17	1293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2369.71039018133	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAGTTTCAAGGCT	NA	False	NA	-12	True	AATAAA	-42	NA	63359945	63380605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373892_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.27	chr14	+	1860	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-14	1292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTGCAGTTTCAAGGC	NA	False	NA	-13	True	AATAAA	-41	NA	63359948	63380604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63380112_63380188
ES.10958.29	chr14	+	4826	6	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	-7	1267	intron_retention	FALSE	canonical	3	6333	junction_1	490.484902927705	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACATTGGCAGGGTGCA	NA	False	NA	21	True	AATAAA	-16	NA	63359955	63380579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63371500_63373056_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.3	chr14	+	4754	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	-11	0	-11	0	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCTGTCATCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	63359899	63383372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.30	chr14	+	1861	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	1	1271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2336.48131034259	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCAGGGTGCACGGT	NA	False	NA	25	True	AATAAA	-20	NA	63359963	63380583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376536_63379193_63379312_63379680
ES.10958.32	chr14	+	1913	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2344.52056221878	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359964	63380603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373063_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.33	chr14	+	4217	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2249.16024551387	2613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTTTCCTGTCATCA	NA	False	NA	NA	False	ATTAAA	-16	NA	63359964	63383370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63381960_63382429
ES.10958.34	chr14	+	1900	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2336.48131034259	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359964	63380603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379202_63379312_63379680
ES.10958.35	chr14	+	3505	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1279	intron_retention	FALSE	non_canonical	0	0	junction_2	3098.85271880409	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGCACGGTTCTGTGCT	NA	False	NA	-26	True	AATAAA	-28	NA	63359964	63380591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.36	chr14	+	1909	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1290	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2355.85194676188	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	NA	False	NA	-15	True	AATAAA	-39	NA	63359964	63380602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370774_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.37	chr14	+	4134	7	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	1268	intron_retention	FALSE	canonical	3	6333	junction_1	570.951082746052	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGGCAGGGTGCAC	NA	False	NA	22	True	AATAAA	-17	NA	63359964	63380580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63371500_63373056_63373172_63373855_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.38	chr14	+	1815	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2344.2559955857	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	NA	False	NA	-15	True	AATAAA	-39	NA	63359965	63380602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379296_63379767
ES.10958.4	chr14	+	1869	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	2	2872	2	1188	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGTTGTAGTTA	NA	False	NA	-58	True	AATGAA	-20	NA	63359912	63380500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.41	chr14	+	1902	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2369.71039018133	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTGCAGTTTCAAGG	NA	False	NA	-14	True	AATAAA	-40	NA	63359965	63380603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373155_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.42	chr14	+	2131	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1271	intron_retention	FALSE	canonical	3	6333	junction_1	617.398359549975	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCAGGGTGCACGGT	NA	False	NA	25	True	AATAAA	-20	NA	63359965	63380583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.44	chr14	+	1708	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTGCTTTTTG	NA	False	NA	-67	True	AATGAA	-11	NA	63359965	63380491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63380079_63380177
ES.10958.45	chr14	+	4960	8	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1268	intron_retention	FALSE	canonical	3	6333	junction_1	648.470004656172	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATTGGCAGGGTGCAC	NA	False	NA	22	True	AATAAA	-17	NA	63359965	63380580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.46	chr14	+	1477	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2344.2559955857	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCAGGGTGCACGGT	NA	False	NA	25	True	AATAAA	-20	NA	63359965	63380583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63380102
ES.10958.47	chr14	+	1830	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGGCAGGGTGCACG	NA	False	NA	23	True	AATAAA	-18	NA	63359965	63380581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63380401_63380467
ES.10958.49	chr14	+	1877	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2249.16024551387	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTGCTGCAGTTTCA	NA	False	NA	-17	True	AATAAA	-37	NA	63359965	63380600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370798_63370836_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.50	chr14	+	1924	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2354.79383386317	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	NA	False	NA	-15	True	AATAAA	-39	NA	63359965	63380602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375574_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.52	chr14	+	1890	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2294.59022942826	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCAGGGTGCACGGT	NA	False	NA	25	True	AATAAA	-20	NA	63359965	63380583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370907_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.53	chr14	+	4349	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3375.73035653027	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGGCAGGGTGCACG	NA	False	NA	23	True	AATAAA	-18	NA	63359965	63380581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376710_63376965_63379312_63379680
ES.10958.54	chr14	+	4239	7	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	1188	intron_retention	FALSE	canonical	3	6333	junction_1	571.599145672326	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGTTGTAGTTA	NA	False	NA	-58	True	AATGAA	-20	NA	63359965	63380500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.55	chr14	+	4580	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2249.16024551387	2613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACTGGTTTTCCTGTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	63359965	63383367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680_63382173_63382275
ES.10958.56	chr14	+	5016	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	3	-1179	intron_retention	FALSE	canonical	3	6333	junction_1	614.086605760946	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTGGAACTTGGGGTC	NA	False	NA	6	True	TATAAA	-16	NA	63359965	63382193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.57	chr14	+	5242	8	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	4	-1184	intron_retention	FALSE	canonical	3	6333	junction_1	656.341374590997	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCAAGTGGAACTTG	NA	False	NA	1	True	TATAAA	-11	NA	63359966	63382188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.59	chr14	+	1892	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	5	1290	at_least_one_novel_splicesite	FALSE	canonical	1	105	junction_6	2322.8339013656	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	NA	False	NA	-15	True	AATAAA	-39	NA	63359967	63380602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375544_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.6	chr14	+	3797	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	2	-1176	intron_retention	FALSE	canonical	3	6333	junction_1	617.398359549975	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAACTTGGGGTCTTA	NA	False	NA	9	True	TATAAA	-19	NA	63359912	63382196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.60	chr14	+	1791	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	6	1176	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2355.85194676188	2606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAAAAAACTTGCTTT	NA	False	NA	-70	True	AATGAA	-8	NA	63359968	63380488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370774_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.61	chr14	+	2065	10	NNC	ENSMUSG00000021939.9	novel	801	6	NA	NA	132	1285	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	2359.23660492641	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTTCTGTGCTGCAGTT	NA	False	NA	-20	True	AATAAA	-34	NA	63360094	63380597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360296_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.62	chr14	+	1723	8	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	11500	2768	-1556	1292	3prime_fragment	FALSE	canonical	3	6334	junction_2	420.491791761475	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTGCAGTTTCAAGGC	795	False	NA	-13	True	AATAAA	-41	NA	63371410	63380604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.63	chr14	+	1533	6	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	13944	2755	888	1305	3prime_fragment	FALSE	canonical	3	7088	junction_1	206.547234307313	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGCTTTTGTCTCTCCC	3239	False	NA	0	True	NA	NA	NA	63373854	63380617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.64	chr14	+	4741	5	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	1534	1290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3203.63960988124	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTGCAGTTTCAAG	3885	False	NA	-15	True	AATAAA	-39	NA	63374500	63380602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63375568_63375799_63375944_63376447_63376710_63376965_63379312_63379680
ES.10958.65	chr14	+	900	1	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	6713	1267	mono-exon	FALSE	NA	NA	NA	NA	NA	2606	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACATTGGCAGGGTGCA	9064	False	NA	21	True	AATAAA	-16	NA	63379679	63380579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63379700_63380600
ES.10958.7	chr14	+	4141	8	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	4	1271	intron_retention	FALSE	canonical	3	6333	junction_1	530.847531821347	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCAGGGTGCACGGT	NA	False	NA	25	True	AATAAA	-20	NA	63359914	63380583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10958.8	chr14	+	3572	3	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3166.5	2613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTTCCTGTCATC	NA	False	NA	NA	False	ATTAAA	-15	NA	63359914	63383369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63370764_63370876_63380008
ES.10958.9	chr14	+	2058	11	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	8	1293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2965.53763928229	2608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAGTTTCAAGGCT	NA	False	NA	-12	True	AATAAA	-42	NA	63359918	63380605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63360015_63367085_63367176_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ES.10959.1	chr14	-	4999	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-30	-2109	-26	2106	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGACTAGTTTCATTGTG	4281	False	NA	NA	False	AAAAAG	-13	NA	63415272	63380492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ES.10959.10	chr14	-	3912	7	NIC	ENSMUSG00000021273.12	novel	2860	8	NA	NA	-33	-1252	intron_retention	FALSE	canonical	3	727	junction_4	75.6299470374592	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	4274	False	NA	-36	True	AATAGA	-11	NA	63415279	63383853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63396596_63400750_63400935_63401980_63402079_63415131
ES.10959.11	chr14	-	1581	9	NNC	ENSMUSG00000021273.12	novel	3698	10	NA	NA	-59	-1252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	281.570567309511	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	4248	False	NA	-36	True	AATAGA	-11	NA	63415305	63383853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63384253_63384342_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ES.10959.15	chr14	-	1824	9	NNC	ENSMUSG00000021273.12	novel	3698	10	NA	NA	-63	-1263	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	368.754999966102	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAAGCAACTGGTCC	4244	False	NA	-47	True	NA	NA	NA	63415309	63383864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63396686_63396847_63400750_63400935_63401980_63402079_63415131
ES.10959.16	chr14	-	2326	9	NNC	ENSMUSG00000021273.12	novel	3698	10	NA	NA	-854	-1263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	281.570567309511	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAAGCAACTGGTCC	3453	False	NA	-47	True	NA	NA	NA	63416100	63383864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131_63415941_63416069
ES.10959.17	chr14	-	1647	8	NNC	ENSMUSG00000021273.12	novel	2860	8	NA	NA	-51	-1263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	298.873941073927	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAAGCAACTGGTCC	4256	False	NA	-47	True	NA	NA	NA	63415297	63383864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394191_63396462_63396596_63400750_63400935_63401980_63402079_63415131
ES.10959.18	chr14	-	6747	2	NNC	ENSMUSG00000035121.7	novel	3580	3	NA	NA	4268	-17	intron_retention	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCTTCGTTAGGCAA	9729	False	NA	-22	True	AATAAA	-16	NA	63426706	63419908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63420289_63420339
ES.10959.2	chr14	-	2678	10	NNC	ENSMUSG00000021273.12	novel	3698	10	NA	NA	-1099	-1209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	349.709862106177	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCGTGTTGTTCTGCGCG	1427	False	NA	7	True	NA	NA	NA	63418126	63383810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131_63415941_63416341_63416427_63417882
ES.10959.5	chr14	-	5893	7	NIC	ENSMUSG00000021273.12	novel	2860	8	NA	NA	-124	-1250	intron_retention	FALSE	canonical	3	738	junction_3	61.5214506403164	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	4183	False	NA	-34	True	AATAGA	-13	NA	63415370	63383851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63400935_63401980_63402079_63415131
ES.10959.6	chr14	-	5399	3	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	7919	1253	7919	-1250	intron_retention	FALSE	canonical	3	821	junction_1	40	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	NA	False	NA	-34	True	AATAGA	-13	NA	63394455	63383851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63384418_63388598_63388752_63389775
ES.10959.8	chr14	-	3419	15	Fusion	ENSMUSG00000035121.7_ENSMUSG00000021273.12	novel	3698	10	NA	NA	33	-1251	multi-exon	FALSE	canonical	0	0	junction_9	419.262137326898	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTCCTTGTCTTTCTCA	7134	False	NA	-35	True	AATAGA	-12	NA	63430941	63383852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63396686_63396809_63400750_63400935_63401980_63402079_63415131_63415941_63416341_63416427_63420869_63421014_63423486_63423684_63425889_63426231_63429153_63429308_63430872
ES.10959.9	chr14	-	6071	7	NIC	ENSMUSG00000021273.12	novel	3048	7	NA	NA	-214	-1252	intron_retention	FALSE	canonical	2	3	junction_5	312.326974321606	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	2668	False	NA	-36	True	AATAGA	-11	NA	63402588	63383853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63396686_63400935_63401980
ES.1096.1	chr1	+	3997	3	NNC	ENSMUSG00000097814.6	novel	410	3	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATCTCTATTATTTCA	NA	False	NA	7	True	NA	NA	NA	96799947	96808961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_96800394_96802123_96802249_96805535
ES.1096.10	chr1	+	1990	3	FSM	ENSMUSG00000097814.6	ENSMUST00000202118.2	410	3	11	-1591	11	1591	multi-exon	FALSE	canonical	3	11	junction_1	4.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAAAATGTCATCCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	96799968	96807217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_96800116_96800209_96800394_96805558
ES.1096.11	chr1	+	1884	3	NNC	ENSMUSG00000097814.6	novel	410	3	NA	NA	37	1593	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAATGTCATCCTTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	96799994	96807219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_96800116_96800209_96800394_96805640
ES.1096.12	chr1	+	4153	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	59	-363	47	363	multi-exon	FALSE	canonical	3	20	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGTATGTGTGTGTGT	NA	False	NA	NA	False	AAGAAA	-1	NA	96800004	96809322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_96800394_96805558
ES.1096.13	chr1	+	5732	1	Genic_Genomic	ENSMUSG00000097814.6	novel	NA	NA	NA	NA	8089	4819	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTGATTTTGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	96808046	96813778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_96808000_96813800
ES.1096.2	chr1	+	3739	2	NNC	ENSMUSG00000097814.6	novel	3849	2	NA	NA	11	-5	intron_retention	FALSE	canonical	1	1	junction_1	0	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAACATAATCATCTCTAT	NA	False	NA	0	True	NA	NA	NA	96799968	96808954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_96800394_96805640
ES.1096.3	chr1	+	2086	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	23	1740	11	1593	multi-exon	FALSE	canonical	3	20	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAATGTCATCCTTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	96799968	96807219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_96800394_96805558
ES.1096.4	chr1	+	3550	2	NIC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATCTCTATTATTTCA	NA	False	NA	7	True	NA	NA	NA	96799968	96808961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_96800116_96805558
ES.1096.5	chr1	+	3523	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	23	303	11	-303	multi-exon	FALSE	canonical	3	20	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCTAAATGATGGT	NA	False	NA	NA	False	NA	NA	NA	96799968	96808656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_96800394_96805558
ES.1096.6	chr1	+	3838	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	23	-12	11	12	multi-exon	FALSE	canonical	3	20	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTCATCAAAGTGAC	NA	False	NA	17	True	NA	NA	NA	96799968	96808971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_96800394_96805558
ES.1096.7	chr1	+	3730	3	NNC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTCTATTATTTCAT	NA	False	NA	8	True	NA	NA	NA	96799968	96808962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_96800116_96800214_96800394_96805558
ES.1096.8	chr1	+	2340	3	NNC	ENSMUSG00000097814.6	novel	410	3	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_2	10	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAATCATCTCTATTAT	NA	False	NA	3	True	NA	NA	NA	96799968	96808957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_96800394_96805558_96806261_96807744
ES.10960.1	chr14	-	3457	7	FSM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	-76	-7	-53	7	multi-exon	FALSE	canonical	2	8	junction_5	3.67045259092421	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTTCTAACGGGCCT	NA	False	NA	NA	False	AATAAA	-26	NA	63482773	63436363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
ES.10960.2	chr14	-	3834	7	NNC	ENSMUSG00000021944.16	novel	3374	7	NA	NA	-16	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.60977222864644	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTTCTAACGGGCCT	NA	False	NA	NA	False	AATAAA	-26	NA	63482736	63436363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63438415_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
ES.10960.4	chr14	-	173	1	Intergenic	novelGene_9164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAAAAGGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	63452038	63451865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63451900_63452000
ES.10960.5	chr14	-	3357	1	Genic_Genomic	ENSMUSG00000021944.16	novel	NA	NA	NA	NA	-38	-838	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	63482758	63479401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_63479400_63482800
ES.10961.1	chr14	-	251	1	Intergenic	novelGene_9165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACACATTAAGAATAATAG	7189	False	NA	NA	False	NA	NA	NA	63492987	63492736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63492700_63493000
ES.10962.1	chr14	+	175	1	Intergenic	novelGene_9166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAATCAC	NA	False	NA	NA	False	NA	NA	NA	63525992	63526167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63526000_63526200
ES.10963.1	chr14	+	160	1	Intergenic	novelGene_9167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	63574450	63574610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63574400_63574600
ES.10964.1	chr14	+	2422	1	NIC	ENSMUSG00000114892.2	novel	1799	2	NA	NA	13994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATGCATAT	NA	False	NA	NA	False	NA	NA	NA	63580662	63583084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63580700_63583100
ES.10965.1	chr14	+	4170	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	76	-15	61	15	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACTGCCTTGTTACC	NA	False	NA	NA	False	AATAAA	-31	NA	63673918	63702962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
ES.10965.2	chr14	+	4096	3	NNC	ENSMUSG00000035095.12	novel	4231	4	NA	NA	14978	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCCAAATAGAGACATT	NA	False	NA	NA	False	AATAAA	-16	NA	63688835	63702947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63689041_63689319_63690089_63699825
ES.10965.3	chr14	+	4079	3	NNC	ENSMUSG00000035095.12	novel	4231	4	NA	NA	15021	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATATCCAAATAGAGAC	NA	False	NA	NA	False	AATAAA	-13	NA	63688878	63702944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63689070_63689319_63690089_63699825
ES.10965.4	chr14	+	3349	2	NNC	ENSMUSG00000035095.12	novel	4231	4	NA	NA	24549	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGATATCCAAATAG	NA	False	NA	NA	False	AATAAA	-9	NA	63698406	63702940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63698641_63699825
ES.10966.1	chr14	+	4649	5	Antisense	novelGene_ENSMUSG00000021953.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTATTTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	63746252	63754233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_63747245_63748106_63748240_63748318_63748371_63750719_63753608_63753649
ES.10966.2	chr14	+	2425	2	Antisense	novelGene_ENSMUSG00000021953.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGTGTGGCCTTGT	NA	False	NA	NA	False	NA	NA	NA	63746533	63749094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_63748805_63748940
ES.10966.3	chr14	+	454	3	Antisense	novelGene_ENSMUSG00000021953.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	7	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGTGTGGCCTTGT	NA	False	NA	NA	False	NA	NA	NA	63746536	63749094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_63746691_63747098_63747245_63748940
ES.10966.4	chr14	+	2558	5	Intergenic	novelGene_9168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	5.8309518948453	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	63746546	63754230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63746691_63747098_63747241_63750719_63751139_63752335_63753608_63753649
ES.10966.5	chr14	+	153	1	Intergenic	novelGene_9169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATGAATAAATA	571	False	NA	NA	False	NA	NA	NA	63748891	63749044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63748900_63749000
ES.10967.1	chr14	-	1523	10	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-92	15807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1020.87146262881	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAAATTGGGGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	63746297	63713988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63714012_63729932_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.10	chr14	-	2242	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	212	-573	-124	573	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTATTTTTCATACG	NA	False	NA	NA	False	AATACA	-17	NA	63746329	63729222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.11	chr14	-	1728	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	163	-10	163	10	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGATTTATCTAGGTG	NA	False	NA	-6	True	ATTAAA	-28	NA	63746378	63729785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.12	chr14	-	4116	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-91	0	intron_retention	FALSE	canonical	3	2964	junction_2	199.365319482213	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746296	63729795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63737770_63746158
ES.10967.13	chr14	-	1657	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	1139	-1	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_8	1027.11737857705	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTTTTACTTAGGAT	NA	False	NA	-17	True	ATTAAA	-17	NA	63745066	63729796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63744906
ES.10967.16	chr14	-	1517	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-124	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1144.84954897834	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746329	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.17	chr14	-	1533	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	1013.63834156962	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746273	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730218_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.18	chr14	-	1787	8	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	116	-2	at_least_one_novel_splicesite	FALSE	canonical	2	63	junction_6	1428.50365553524	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746089	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63737569_63737770_63745755
ES.10967.2	chr14	-	1654	9	NNC	ENSMUSG00000021953.15	novel	619	3	NA	NA	-114	5204	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1042.59301143831	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGGTTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	63746319	63724591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63725087_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.20	chr14	-	2556	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-118	-2	intron_retention	FALSE	canonical	3	2964	junction_1	110.913645394486	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746323	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.21	chr14	-	1600	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-59	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1077.25100806404	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746264	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746152
ES.10967.23	chr14	-	1561	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1077.87971847512	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746216	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735039_63735090_63737569_63737770_63746158
ES.10967.24	chr14	-	1830	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	116	-2	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	1031.02108823001	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746089	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63745755
ES.10967.25	chr14	-	7907	6	ISM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	5423	2	-3410	-2	intron_retention	FALSE	canonical	3	2964	junction_2	228.696654982096	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63741118	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393
ES.10967.26	chr14	-	2917	8	ISM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	7351	2	-1482	-2	3prime_fragment	FALSE	canonical	3	2964	junction_2	198.16711150348	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63739190	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569
ES.10967.27	chr14	-	1621	5	ISM	ENSMUSG00000021953.15	ENSMUST00000168669.8	1041	7	2785	-303	-335	-2	3prime_fragment	FALSE	canonical	2	2	junction_2	1436.07562039748	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63734923	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63730296_63731190_63731461_63733168_63733342_63733438_63733589_63734393
ES.10967.28	chr14	-	1298	8	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	102	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1141.17533396807	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63737606	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733554_63734393_63734465_63735046_63735090_63737569
ES.10967.29	chr14	-	1546	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_8	1052.17462310208	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTTTACTTAGGA	NA	False	NA	-18	True	ATTAAA	-16	NA	63746216	63729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746158
ES.10967.3	chr14	-	3429	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	319	-1867	-17	1867	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTAGGGTTCTACTGCTG	NA	False	NA	NA	False	AATAAA	-20	NA	63746222	63727928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.30	chr14	-	1475	8	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-101	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1143.46962159482	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGCTTTTTACTTAGG	NA	False	NA	-19	True	ATTAAA	-15	NA	63746306	63729798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733324_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.31	chr14	-	1535	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	1072.42254236611	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGCTTTTTACTTAG	NA	False	NA	-20	True	ATTAAA	-14	NA	63746217	63729799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733324_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.33	chr14	-	1624	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	152	105	152	-105	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTATTCTCTTGCCCAG	NA	False	NA	-6	True	ATTAAA	-23	NA	63746389	63729900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.35	chr14	-	7648	8	ISM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	2511	111	2175	-111	3prime_fragment	FALSE	canonical	3	2964	junction_2	198.16711150348	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63744030	63729906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569
ES.10967.36	chr14	-	2447	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-119	-112	intron_retention	FALSE	canonical	3	2964	junction_1	110.913645394486	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746324	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.37	chr14	-	1515	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-125	-112	combination_of_known_splicesites	FALSE	canonical	2	63	junction_6	1121.56388628576	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746330	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63737569_63737770_63746158
ES.10967.38	chr14	-	1353	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-11	-112	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1136.03106094357	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746216	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.39	chr14	-	1512	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	1173	-112	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_8	1027.11737857705	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63745032	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63744906
ES.10967.4	chr14	-	3049	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	145	-1313	145	1313	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGTTACGAGCAAATGA	NA	False	NA	-4	True	ATTAAA	-20	NA	63746396	63728482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.40	chr14	-	1799	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	37	-112	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	1031.02108823001	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746168	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63745755
ES.10967.43	chr14	-	1540	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-111	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1404.6858578967	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746316	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737571_63737762_63746152
ES.10967.44	chr14	-	2068	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-53	-112	intron_retention	FALSE	canonical	3	2964	junction_2	197.154347491233	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746258	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63735090_63737569_63737770_63746158
ES.10967.47	chr14	-	4865	6	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-50	-112	intron_retention	FALSE	canonical	3	2964	junction_2	224.912960942672	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746255	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63734465_63735046_63737770_63746158
ES.10967.49	chr14	-	1562	10	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	1156	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1345.3894107903	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63745049	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63743187_63743221_63744906
ES.10967.5	chr14	-	2446	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	2	946	combination_of_known_splicesites	FALSE	canonical	2	63	junction_6	1121.56388628576	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAGTTGCAGTCTTTTT	NA	False	NA	16	True	NA	NA	NA	63746203	63728849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63737569_63737770_63746158
ES.10967.50	chr14	-	1519	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-2474	-112	at_least_one_novel_splicesite	FALSE	canonical	1	39	junction_8	1064.54767389723	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63740182	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63740049
ES.10967.51	chr14	-	1469	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-114	-112	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	1013.63834156962	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746319	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730218_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.53	chr14	-	2298	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-60	-112	intron_retention	FALSE	canonical	3	2964	junction_2	199.636608642313	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63746265	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.54	chr14	-	3479	2	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-70	-112	intron_retention	FALSE	canonical	3	3357	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGAGACTTATTCTCT	NA	False	NA	-13	True	ATTAAA	-16	NA	63734658	63729907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63731897_63733168
ES.10967.57	chr14	-	1639	10	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-114	-113	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_9	1300.67618691582	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCTGAGACTTATTCTC	NA	False	NA	-14	True	ATTAAA	-15	NA	63746319	63729908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63745124_63745218_63746158
ES.10967.58	chr14	-	1421	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	3	-113	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_8	1052.17462310208	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCTGAGACTTATTCTC	NA	False	NA	-14	True	ATTAAA	-15	NA	63746202	63729908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746158
ES.10967.6	chr14	-	2680	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	145	-944	145	944	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAAAGTTGCAGTCTTT	NA	False	NA	14	True	NA	NA	NA	63746396	63728851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.61	chr14	-	1424	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-11	-114	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	1072.42254236611	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCCTGAGACTTATTCT	NA	False	NA	-15	True	ATTAAA	-14	NA	63746216	63729909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733324_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.62	chr14	-	1460	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-11	-114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1081.86395141672	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCCTGAGACTTATTCT	NA	False	NA	-15	True	ATTAAA	-14	NA	63746216	63729909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63730296_63731190_63731479_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ES.10967.7	chr14	-	3300	7	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-25	943	intron_retention	FALSE	canonical	3	2964	junction_1	119.781282158589	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAAAGTTGCAGTCTT	NA	False	NA	13	True	NA	NA	NA	63737733	63728852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569
ES.10968.1	chr14	+	173	1	Intergenic	novelGene_9170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	7690	False	NA	NA	False	NA	NA	NA	63756010	63756183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63756000_63756200
ES.10969.1	chr14	+	3299	3	Antisense	novelGene_ENSMUSG00000035078.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCTGTAGACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	63758326	63762661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_63759071_63760057_63761030_63761078
ES.1097.1	chr1	+	3179	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	96816498	96819677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_96816500_96819700
ES.10970.1	chr14	-	5696	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	1542	875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.7767826091749	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCTTGTGTATCTTCTT	NA	False	NA	NA	False	NA	NA	NA	63779889	63756224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796
ES.10970.10	chr14	-	6697	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	58	0	intron_retention	FALSE	non_canonical	0	0	junction_1	86.1536418266808	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781373	63757099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.12	chr14	-	6037	10	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	275	0	intron_retention	FALSE	canonical	2	5	junction_1	66.8881506050065	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781156	63757099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.15	chr14	-	4892	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	83	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTATGGAATCTGGTTT	NA	False	NA	-10	True	AATAAA	-17	NA	63781348	63757100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63758972_63760343_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.19	chr14	-	5282	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7595128304267	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGCCGTATGGAATC	NA	False	NA	-16	True	AATAAA	-11	NA	63781442	63757106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.2	chr14	-	6517	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	269	-4216	269	390	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTGTGTGTTATTA	NA	False	NA	NA	False	NA	NA	NA	63781162	63756709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.20	chr14	-	6196	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	259	-7	intron_retention	FALSE	canonical	1	2	junction_10	85.7820494042897	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGCCGTATGGAATC	NA	False	NA	-16	True	AATAAA	-11	NA	63781172	63757106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780506_63780573_63780906
ES.10970.22	chr14	-	5033	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-49	-378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCGTGAAATGTATGCTT	NA	False	NA	-4	True	AATGAA	-20	NA	63781480	63757477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.24	chr14	-	4503	4	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	14183	-3314	-1640	-512	3prime_fragment	FALSE	canonical	3	205	junction_2	7.48331477354788	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAGAAAAAGAATGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	63767248	63757611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173
ES.10970.25	chr14	-	4871	13	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	42	-515	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.481799134404	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAATTTAGAAAAAGAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	63781389	63757614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780506_63780573_63780906
ES.10970.27	chr14	-	5521	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	-57	-2894	-57	-932	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATAATCTACTGTTCATA	NA	False	NA	-7	True	AATAAA	-23	NA	63781488	63758031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.29	chr14	-	4451	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-27	-938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63781458	63758037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.32	chr14	-	4036	13	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	454	-938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.481799134404	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63780977	63758037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780506_63780573_63780906
ES.10970.34	chr14	-	4262	13	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	10	-938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.581070023091	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTCATAATCTACTG	NA	False	NA	-13	True	AATAAA	-17	NA	63781421	63758037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63758438_63758589_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.36	chr14	-	4308	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	99	-939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.4911677540771	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63781332	63758038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767783_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.39	chr14	-	5361	10	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	12	-939	intron_retention	FALSE	canonical	2	5	junction_1	66.8881506050065	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63781419	63758038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.4	chr14	-	5414	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-51	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTATGGAATCTGGTTTTT	NA	False	NA	-8	True	AATAAA	-19	NA	63781482	63757098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.41	chr14	-	5311	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	42	-939	intron_retention	FALSE	non_canonical	0	0	junction_1	107.568815183584	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63781389	63758038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767261_63767636_63767783_63771775_63771994_63774440_63774615_63777702_63777829_63779796
ES.10970.45	chr14	-	4378	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	42	-939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63781389	63758038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759067_63760055_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.46	chr14	-	3413	8	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	6915	-939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.377840258012	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTCATAATCTACT	NA	False	NA	-14	True	AATAAA	-16	NA	63774516	63758038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440
ES.10970.48	chr14	-	3999	4	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	301	-941	intron_retention	FALSE	non_canonical	0	0	junction_3	98.0827315189693	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTCATAATCTA	NA	False	NA	-16	True	AATAAA	-14	NA	63781130	63758040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764239_63764392_63765559_63765710_63781059
ES.10970.5	chr14	-	5237	11	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.9407824664186	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781458	63757099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.50	chr14	-	4296	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	41	-941	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.7595128304267	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTCATAATCTA	NA	False	NA	-16	True	AATAAA	-14	NA	63781390	63758040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.52	chr14	-	3925	14	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	14	-1684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.060292036387	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACATTTATTTTAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	63781417	63758783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759071_63760056_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63774962_63775036_63775749_63775938_63777702_63777829_63779796_63779906_63780906
ES.10970.53	chr14	-	4322	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	12	-1764	12	1764	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATGGCTCTAAAACCT	NA	False	NA	NA	False	NA	NA	NA	63781419	63759161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.54	chr14	-	4414	1	NIC	ENSMUSG00000035078.7	novel	1467	5	NA	NA	2031	1762	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACCATGGCTCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	63763577	63759163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_63759200_63763600
ES.10970.55	chr14	-	4195	10	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	25	1734	intron_retention	FALSE	canonical	2	5	junction_1	66.8881506050065	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCAGTGTGTTGCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	63781406	63759191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.56	chr14	-	4151	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	38	-1619	38	1619	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGTCGGTTAAACACG	NA	False	NA	NA	False	AATAAA	-25	NA	63781393	63759306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.57	chr14	-	2563	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	-50	57	-50	-57	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGTGTGGTCCTCTGAT	NA	False	NA	33	True	GATAAA	-15	NA	63781481	63760982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.58	chr14	-	1022	5	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	-1582	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.4591125849691	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACAGGTGTGGTCCTCTG	NA	False	NA	31	True	GATAAA	-13	NA	63767190	63760984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761028_63761077_63761667_63764239_63764392_63765559_63765781_63767173
ES.10970.59	chr14	-	4209	6	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	6732	133	6732	-133	intron_retention	FALSE	canonical	3	201	junction_4	7.44043009509531	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGACTAACAAAGCCT	NA	False	NA	-43	True	TATAAA	-23	NA	63774699	63761058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775
ES.10970.60	chr14	-	2309	10	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	38	-139	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	66.8881506050065	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGTTTTGGACTAACA	NA	False	NA	-49	True	TATAAA	-17	NA	63781393	63761064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63761667_63764323_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.61	chr14	-	2009	8	ISM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	59	4243	59	-4243	5prime_fragment	FALSE	canonical	3	201	junction_2	9.28681312179715	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	63781372	63765168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.7	chr14	-	6367	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	29	-3826	29	0	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781402	63757099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10970.8	chr14	-	5338	12	NNC	ENSMUSG00000035078.7	novel	2570	10	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.467814354144	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTATGGAATCTGGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	63781405	63757099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_63759063_63760046_63761028_63761075_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ES.10971.1	chr14	-	179	1	Intergenic	novelGene_9171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	63796862	63796683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63796700_63796900
ES.10972.1	chr14	+	4935	3	FSM	ENSMUSG00000035067.10	ENSMUST00000176510.2	4315	3	-620	0	-448	0	multi-exon	FALSE	canonical	2	12	junction_1	1.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAAATTTTTTTTGGT	8406	False	NA	18	True	AATAAA	-31	NA	63843503	63903631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63844734_63898268_63898376_63900033
ES.10972.2	chr14	+	1274	5	NNC	ENSMUSG00000035067.10	novel	4315	3	NA	NA	-447	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.83282518435822	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGAAATTTTTTTTG	8407	False	NA	16	True	AATAAA	-29	NA	63843504	63903629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63843748_63844527_63844734_63898268_63898376_63900033_63900146_63903023
ES.10972.3	chr14	+	3906	3	FSM	ENSMUSG00000035067.10	ENSMUST00000119973.3	2963	3	-136	-807	-136	807	multi-exon	FALSE	canonical	0	0	junction_1	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAAAG	8718	False	NA	NA	False	NA	NA	NA	63843815	64059065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_63844734_64035655_64035853_64056274
ES.10972.4	chr14	+	1922	4	NNC	ENSMUSG00000035067.10	novel	4315	3	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.48074069840786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAACACTTGAAATT	8866	False	NA	9	True	AATAAA	-44	NA	63843963	63903622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63844734_63898268_63898376_63900033_63900480_63903023
ES.10972.5	chr14	+	1191	1	Intergenic	novelGene_9176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATCACATTCTACAAC	NA	False	NA	NA	False	NA	NA	NA	63875719	63876910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_63875700_63876900
ES.10972.6	chr14	+	2455	3	NNC	ENSMUSG00000035067.10	novel	4315	3	NA	NA	414	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGAAATTTTTTTTG	NA	False	NA	16	True	AATAAA	-29	NA	63897019	63903629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63898376_63900033_63900146_63902642
ES.10972.7	chr14	+	4189	2	ISM	ENSMUSG00000035067.10	ENSMUST00000176862.2	796	4	1177	-3083	1177	-2	3prime_fragment	FALSE	canonical	3	15	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGAAATTTTTTTTG	NA	False	NA	16	True	AATAAA	-29	NA	63897782	63903629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_63898376_63900033
ES.10972.8	chr14	+	4583	1	NIC	ENSMUSG00000035067.10	novel	4315	3	NA	NA	2430	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAACCCAACACTTGA	NA	False	NA	5	True	AATAAA	-40	NA	63899035	63903618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_63899000_63903600
ES.10972.9	chr14	+	1260	2	NNC	ENSMUSG00000035067.10	novel	4315	3	NA	NA	3594	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAACACTTGAAATT	433	False	NA	9	True	AATAAA	-44	NA	63900199	63903622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_63900480_63902642
ES.10973.1	chr14	-	4225	2	Antisense	novelGene_ENSMUSG00000035067.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCCTTGCAAATACTG	9383	False	NA	NA	False	NA	NA	NA	63850897	63846515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_63847053_63847209
ES.10973.2	chr14	-	4369	1	Intergenic	novelGene_9172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTTC	9381	False	NA	NA	False	NA	NA	NA	63850899	63846530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63846500_63850900
ES.10974.1	chr14	-	5381	1	Intergenic	novelGene_9173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAATGTAAAAGGCAACT	1602	False	NA	NA	False	NA	NA	NA	63858678	63853297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63853300_63858700
ES.10974.2	chr14	-	470	1	Intergenic	novelGene_9174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTTAAAAATCAAGGGAGT	1602	False	NA	NA	False	NA	NA	NA	63858678	63858208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63858200_63858700
ES.10975.1	chr14	-	1206	1	Intergenic	novelGene_9175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGCTCTTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	63865106	63863900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_63863900_63865100
ES.10976.1	chr14	+	1363	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	-70	2	-70	-2	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	4017	False	NA	NA	False	AATAAA	-37	NA	64097742	64157302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ES.10976.3	chr14	+	1243	6	NIC	ENSMUSG00000021958.6	novel	1295	7	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.5440009539709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	4044	False	NA	NA	False	AATAAA	-37	NA	64097769	64157302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64115560_64115638_64156545
ES.10977.1	chr14	-	3489	1	Antisense	novelGene_ENSMUSG00000021958.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACACACGTAACCAACT	NA	False	NA	NA	False	ATTAAA	-12	NA	64107543	64104054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_64104100_64107500
ES.10978.1	chr14	+	3254	2	NNC	ENSMUSG00000063060.7	novel	3299	2	NA	NA	-10372	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCCTTTGAAATAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	64170749	64188185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64171022_64185203
ES.10978.2	chr14	+	3426	2	FSM	ENSMUSG00000063060.7	ENSMUST00000079652.7	3299	2	-122	-5	-122	5	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCCTTTGAAATAGTAT	4561	False	NA	NA	False	AATAAA	-21	NA	64180999	64188186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64181443_64185203
ES.10979.1	chr14	+	177	1	Intergenic	novelGene_9177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGAAGAGAAAAG	8611	False	NA	NA	False	NA	NA	NA	64449706	64449883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64449700_64449900
ES.1098.1	chr1	+	182	1	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAGTGAGGAGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	97560526	97560708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_97560500_97560700
ES.10980.1	chr14	+	775	1	Intergenic	novelGene_9178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTACCTGGCCACCTTC	1069	False	NA	NA	False	GATAAA	-30	NA	64676504	64677279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64676500_64677300
ES.10981.1	chr14	-	4307	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14902	-2885	-84	2885	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTGCAGAATATGCGT	NA	False	NA	NA	False	AATACA	-14	NA	64678450	64357188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ES.10981.2	chr14	-	1224	6	NNC	ENSMUSG00000054733.10	novel	1180	6	NA	NA	955	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.7748087302145	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCCTGCTGTGAGTCTG	NA	False	NA	-2	True	AATAAA	-22	NA	64677411	64360071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64677319
ES.10981.3	chr14	-	1216	5	NIC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.7686952832501	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	NA	False	NA	-4	True	AATAAA	-20	NA	64678364	64360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_64360803_64447876_64447984_64471277_64471383_64551135_64551205_64678158
ES.10981.4	chr14	-	1330	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14994	0	8	0	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	NA	False	NA	-4	True	AATAAA	-20	NA	64678358	64360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ES.10981.5	chr14	-	1200	5	NIC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	27	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.0935935757603	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCAACCGCCTGCTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	64678339	64360077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_64360803_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ES.10981.6	chr14	-	781	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14988	555	2	-269	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTCCCTGAAGGT	NA	False	NA	-3	True	ATTAAA	-16	NA	64678364	64360628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
ES.10982.1	chr14	+	5544	1	Intergenic	novelGene_9179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTGTTATTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	64742536	64748080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64742500_64748100
ES.10983.1	chr14	+	168	1	Intergenic	novelGene_9180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATTTTAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	64808068	64808236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64808100_64808200
ES.10984.1	chr14	+	459	1	FSM	ENSMUSG00000065597.3	ENSMUST00000083663.3	85	1	75	-449	75	449	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGCCCCAAAGCCTAGA	NA	False	NA	NA	False	NA	NA	NA	64828180	64828639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64828200_64828600
ES.10985.1	chr14	+	2700	1	FSM	ENSMUSG00000092972.3	ENSMUST00000175231.3	87	1	75	-2688	75	2688	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCATCTATAGTTCTT	NA	False	NA	19	True	AATAAA	-19	NA	64828708	64831408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64828700_64831400
ES.10986.1	chr14	-	4054	1	Antisense	novelGene_ENSMUSG00000092972.3_AS_novelGene_ENSMUSG00000065597.3_AS_novelGene_ENSMUSG00000097545.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAACCGAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	64830023	64825969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_64826000_64830000
ES.10986.2	chr14	-	3142	2	Antisense	novelGene_ENSMUSG00000092972.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64830021	64826006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_64826412_64827284
ES.10987.1	chr14	+	657	1	Intergenic	novelGene_9181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	64840974	64841631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64841000_64841600
ES.10988.1	chr14	-	174	1	Intergenic	novelGene_9182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	64859116	64858942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64858900_64859100
ES.10989.1	chr14	+	167	1	Intergenic	novelGene_9183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTTTTTTAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	64862823	64862990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64862800_64863000
ES.1099.1	chr1	+	172	1	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGGAGGGAGGGAGG	6804	False	NA	NA	False	NA	NA	NA	97570527	97570699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_97570500_97570700
ES.10990.1	chr14	-	171	1	Intergenic	novelGene_9184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATACATCACCACC	NA	False	NA	NA	False	NA	NA	NA	64869048	64868877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64868900_64869000
ES.10991.1	chr14	-	198	1	Intergenic	novelGene_9185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGATGGACA	NA	False	NA	NA	False	AATAAA	-20	NA	64869590	64869392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64869400_64869600
ES.10992.1	chr14	-	177	1	Intergenic	novelGene_9186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	64883276	64883099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64883100_64883300
ES.10993.1	chr14	+	162	1	Intergenic	novelGene_9187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	64883354	64883516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64883400_64883500
ES.10994.1	chr14	+	8908	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-36	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	16.4292315516919	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCAAGCATAACTGTTC	NA	False	NA	16	True	AATAAA	-26	NA	64889943	65047072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
ES.10994.10	chr14	+	4255	30	NNC	ENSMUSG00000060012.10	novel	5603	40	NA	NA	4	-32071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.0311091463131	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGTCTCGTGGTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	64889983	65009318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65008780
ES.10994.13	chr14	+	5494	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-1	-306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5413442322854	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGGCTCCATGATGCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	64889989	65043439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043214
ES.10994.14	chr14	+	9101	40	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	21.8624292329515	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTCCGAGGTCAAGCAT	NA	False	NA	8	True	AATAAA	-18	NA	64889990	65047064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65030094_65030280_65037793_65037857_65040422_65041180_65043479
ES.10994.15	chr14	+	2753	20	NNC	ENSMUSG00000060012.10	novel	5603	40	NA	NA	0	27423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17.5374549712838	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGCCCGTCTTCAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	64889990	64989632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416
ES.10994.18	chr14	+	6112	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	0	581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.4725931654541	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTAATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	64889990	65044326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959758_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
ES.10994.2	chr14	+	8952	39	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.9090773700674	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCGAGGTCAAGCATAAC	NA	False	NA	11	True	AATAAA	-21	NA	64889957	65047067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.20	chr14	+	4087	19	NNC	ENSMUSG00000060012.10	novel	5603	40	NA	NA	3	27425	intron_retention	FALSE	non_canonical	0	0	junction_2	17.9203484589137	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCCGTCTTCAGAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	64889993	64989634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907172_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416
ES.10994.21	chr14	+	8554	2	FSM	ENSMUSG00000060012.10	ENSMUST00000224507.2	3045	2	3	-5512	3	5512	multi-exon	FALSE	canonical	3	66	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	AATAAA	-39	NA	64889993	64915514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64890106_64907072
ES.10994.22	chr14	+	4050	10	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6278807381119	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	64889993	65047066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965754_65043991
ES.10994.23	chr14	+	7591	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	3	-306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.0434881468463	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGGCTCCATGATGCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	64889993	65043439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907167_64951515_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985892_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422
ES.10994.25	chr14	+	5541	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.9617797486736	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTCTTGAGTCCTT	NA	False	NA	NA	False	TATAAA	-18	NA	64889993	65041392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422
ES.10994.26	chr14	+	2068	2	Intergenic	novelGene_9188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTCCCAACAACCACAT	NA	False	NA	NA	False	NA	NA	NA	64898350	64901180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64899568_64900329
ES.10994.27	chr14	+	282	1	Intergenic	novelGene_9189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAACAAATTAA	NA	False	NA	NA	False	NA	NA	NA	64922051	64922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_64922100_64922300
ES.10994.28	chr14	+	8147	32	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	74471	-1	-60930	1	3prime_fragment	FALSE	canonical	3	39	junction_29	13.9046103644099	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCGAGGTCAAGCATAAC	NA	False	NA	11	True	AATAAA	-21	NA	64964521	65047067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.30	chr14	+	3446	1	NIC	ENSMUSG00000060012.10	novel	5603	40	NA	NA	-40048	26640	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64985403	64988849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_64985400_64988800
ES.10994.31	chr14	+	6678	22	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	97609	2	-37792	-2	3prime_fragment	FALSE	canonical	3	39	junction_19	14.6405147177896	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTCCGAGGTCAAGCAT	NA	False	NA	8	True	AATAAA	-18	NA	64987659	65047064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.32	chr14	+	2631	14	NIC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-22289	375	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	15.1637999328126	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGGACTTCCCCTGC	NA	False	NA	NA	False	NA	NA	NA	65003162	65044120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
ES.10994.33	chr14	+	5210	10	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	120307	0	-15094	0	3prime_fragment	FALSE	canonical	3	39	junction_7	20.2417488143127	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	65010357	65047066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.34	chr14	+	1191	1	Intergenic	novelGene_9192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAATCACAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	65017445	65018636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65017400_65018600
ES.10994.35	chr14	+	2685	5	NIC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-5633	1390	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	17.9513230710162	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACCAGAGGCTGCTTA	NA	False	NA	NA	False	TATAAA	-26	NA	65019818	65045135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
ES.10994.36	chr14	+	4766	5	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	135692	1	291	-1	3prime_fragment	FALSE	canonical	3	39	junction_2	22.8842194535885	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCGAGGTCAAGCATA	NA	False	NA	9	True	AATAAA	-19	NA	65025742	65047065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.37	chr14	+	4346	2	ISM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	150370	0	14969	0	3prime_fragment	FALSE	canonical	3	81	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	65040420	65047066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_65041180_65043479
ES.10994.38	chr14	+	3851	1	NIC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	17762	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTCCGAGGTCAAGCAT	NA	False	NA	8	True	AATAAA	-18	NA	65043213	65047064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65043200_65047100
ES.10994.4	chr14	+	6194	39	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-1	584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.9090773700674	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAATTTATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	64889978	65044329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907167_64951515_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.5	chr14	+	6265	2	FSM	ENSMUSG00000060012.10	ENSMUST00000224507.2	3045	2	-12	-3208	-1	3208	multi-exon	FALSE	canonical	3	66	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	64889978	64913210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_64890106_64907072
ES.10994.6	chr14	+	5494	37	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6249361090412	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTCTTGAGTCCTT	NA	False	NA	NA	False	TATAAA	-18	NA	64889978	65041392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989106_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422
ES.10994.8	chr14	+	9079	40	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.2721529658773	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCGAGGTCAAGCATAAC	NA	False	NA	11	True	AATAAA	-21	NA	64889981	65047067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002428_65002599_65003159_65003190_65003977_65004106_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10994.9	chr14	+	8856	38	NNC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.1715433577032	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	64889983	65047066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_64890106_64907072_64907171_64951520_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65008003_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ES.10995.1	chr14	-	173	1	Intergenic	novelGene_9190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAATGGAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	64949740	64949567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64949600_64949700
ES.10996.1	chr14	-	186	1	Intergenic	novelGene_9191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTTCTGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	64998516	64998330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_64998300_64998500
ES.10997.1	chr14	-	156	1	Intergenic	novelGene_9193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	65035954	65035798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65035800_65036000
ES.10998.1	chr14	+	214	1	Intergenic	novelGene_9195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	8866	False	NA	NA	False	NA	NA	NA	65085332	65085546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65085300_65085500
ES.10999.1	chr14	+	1432	1	Intergenic	novelGene_9196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCACTCTTTCTGACA	NA	False	NA	NA	False	NA	NA	NA	65095886	65097318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65095900_65097300
ES.11.1	chr1	+	227	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	4842537	4842764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_4842500_4842800
ES.110.1	chr1	+	178	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAGAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	13122114	13122292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13122100_13122300
ES.1100.1	chr1	-	3217	3	FSM	ENSMUSG00000044768.17	ENSMUST00000153115.8	3495	3	279	-1	279	1	multi-exon	FALSE	canonical	0	0	junction_2	30	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTCGTGGTGTTTTAA	NA	False	NA	0	True	AATAAA	-19	NA	97589122	97571626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97582324_97582415_97588455
ES.1100.2	chr1	-	2759	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	35	37584	35	1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTCGTGGTGTTTTAA	NA	False	NA	0	True	AATAAA	-19	NA	97589764	97571626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97582324_97582415_97589555
ES.1100.3	chr1	-	2746	3	FSM	ENSMUSG00000044768.17	ENSMUST00000142234.2	639	3	-81	-2026	-81	-6	multi-exon	FALSE	canonical	1	1	junction_2	29.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCATTGTTTCGTGGT	NA	False	NA	-7	True	AATAAA	-12	NA	97589482	97571633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97582324_97582415_97589279
ES.1100.4	chr1	-	2625	2	FSM	ENSMUSG00000044768.17	ENSMUST00000149927.2	2703	2	69	9	69	-9	multi-exon	FALSE	canonical	3	9	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACATCCATTGTTTCGT	NA	False	NA	-10	True	AATAAA	-9	NA	97589730	97571636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97589555
ES.1100.5	chr1	-	1580	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	88	38710	88	907	multi-exon	FALSE	canonical	3	49	junction_2	5.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTAAATTTGGGAT	NA	False	NA	NA	False	ATTAAA	-10	NA	97589711	97572752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97582324_97582415_97589555
ES.1100.6	chr1	-	1833	3	FSM	ENSMUSG00000044768.17	ENSMUST00000153115.8	3495	3	315	1347	315	685	multi-exon	FALSE	canonical	0	0	junction_2	30	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGACCACTTTTTATT	NA	False	NA	NA	False	TTTAAA	-15	NA	97589086	97572974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97574087_97582324_97582415_97588455
ES.11000.1	chr14	+	3031	1	Intergenic	novelGene_9198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCACACGTCCT	2666	False	NA	NA	False	NA	NA	NA	65176732	65179763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65176700_65179800
ES.11001.1	chr14	+	2744	17	FSM	ENSMUSG00000021975.10	ENSMUST00000239450.2	2677	17	-61	-6	-61	6	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGCACTACAGTCTAA	NA	False	NA	26	True	AATAAA	-26	NA	65187432	65277290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ES.11001.10	chr14	+	3025	16	NIC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	1	-4	intron_retention	FALSE	canonical	3	162	junction_11	28.6844905828917	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCCCAGTTCTATTG	NA	False	NA	13	True	AATAAA	-13	NA	65187762	65277277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ES.11001.11	chr14	+	2972	16	NNC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_7	63.5874201395213	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCCCAGTTCTATTG	NA	False	NA	13	True	AATAAA	-13	NA	65187766	65277277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65245575_65254027_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ES.11001.12	chr14	+	5770	15	NIC	ENSMUSG00000021975.10	novel	2677	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	162	junction_12	30.1625697221722	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTCTATTGCACTACA	NA	False	NA	20	True	AATAAA	-20	NA	65187772	65277284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65271545_65273846_65273946_65274794
ES.11001.13	chr14	+	963	6	ISM	ENSMUSG00000021975.10	ENSMUST00000224593.2	3476	8	23	15291	12	-15291	5prime_fragment	FALSE	canonical	3	241	junction_5	12.419339757008	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTTTGCTGTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	65187773	65232958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430
ES.11001.14	chr14	+	5994	1	Intergenic	novelGene_9199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATGTTCACTATATGT	6638	False	NA	NA	False	AAAAAG	-4	NA	65234340	65240334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65234300_65240300
ES.11001.15	chr14	+	106	2	NNC	ENSMUSG00000021975.10	novel	3476	8	NA	NA	60415	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAAAACAAAACCACCAG	NA	False	NA	NA	False	NA	NA	NA	65248176	65273040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65248247_65273004
ES.11001.16	chr14	+	6509	1	NIC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	78769	30	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAACAAAACAAAACCACCA	NA	False	NA	NA	False	NA	NA	NA	65266530	65273039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65266500_65273000
ES.11001.4	chr14	+	4712	16	NIC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	162	junction_12	27.6188341535265	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGTTCTATTGCACT	NA	False	NA	17	True	AATAAA	-17	NA	65187757	65277281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65273946_65274794_65274933_65276721
ES.11001.5	chr14	+	2345	17	NNC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	61.9272506655996	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCCCAGTTCTATTG	NA	False	NA	13	True	AATAAA	-13	NA	65187758	65277277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276781
ES.11001.6	chr14	+	2466	18	NNC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.0338082432431	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCCCAGTTCTATT	NA	False	NA	12	True	AATAAA	-12	NA	65187761	65277276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65187817_65197774_65197840_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ES.11001.7	chr14	+	1322	9	NNC	ENSMUSG00000021975.10	novel	3074	14	NA	NA	1	3300	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	82.0646658130038	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTGTATGCCTTTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	65187762	65251549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65251016
ES.11001.9	chr14	+	2435	17	NNC	ENSMUSG00000021975.10	novel	2674	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.0815990100098	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCCCAGTTCTATTG	NA	False	NA	13	True	AATAAA	-13	NA	65187762	65277277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269666_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276689
ES.11002.1	chr14	-	3483	12	NNC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.0470520905359	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGTCCGGGATTTCTT	7665	False	NA	NA	False	AATAAA	-15	NA	65187319	65049047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65050869_65054465_65054586_65062747_65062820_65063049_65063139_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.10	chr14	-	3277	10	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.16873414375	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGGCTGTCCGGGAT	7680	False	NA	NA	False	AATAAA	-10	NA	65187304	65049052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65050869_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.11	chr14	-	3415	11	NNC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.6354756102579	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGCAAGGCTGTCCGG	7680	False	NA	NA	False	AATAAA	-7	NA	65187304	65049055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65050869_65054465_65054586_65063049_65063139_65064220_65064317_65066034_65066145_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.12	chr14	-	3773	1	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	5932	-992	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTATTTTTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	65053813	65050040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65050000_65053800
ES.11002.13	chr14	-	3167	11	NNC	ENSMUSG00000021972.15	novel	2958	10	NA	NA	-2	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6916225842362	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTCCTGGAGCCC	7677	False	NA	NA	False	AAGAAA	-24	NA	65187307	65059549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65061148_65062714_65062820_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.14	chr14	-	3066	11	NNC	ENSMUSG00000021972.15	novel	2958	10	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6916225842362	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAACAGTGAACTTGCG	7665	False	NA	NA	False	GATAAA	-28	NA	65187319	65059662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65061148_65062714_65062820_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.15	chr14	-	3016	11	NIC	ENSMUSG00000021972.15	novel	2958	10	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.6916225842362	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAACAGTGAACTTGCG	7682	False	NA	NA	False	GATAAA	-28	NA	65187302	65059662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65061148_65062747_65062820_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.16	chr14	-	3070	1	Intergenic	novelGene_9194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAATACTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	65073100	65070030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65070000_65073100
ES.11002.17	chr14	-	4785	4	FSM	ENSMUSG00000021972.15	ENSMUST00000176657.2	4740	4	-25	-20	-1	20	multi-exon	FALSE	canonical	3	40	junction_1	3.09120616516523	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACCAGTATTGCTGTCT	7663	False	NA	NA	False	AATATA	-41	NA	65187321	65121177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.18	chr14	-	5780	1	Antisense	novelGene_ENSMUSG00000114686.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATAATGACCTTGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	65164047	65158267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_65158300_65164000
ES.11002.19	chr14	-	175	1	Intergenic	novelGene_9197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	65163592	65163417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65163400_65163600
ES.11002.2	chr14	-	5800	1	Genic_Genomic	ENSMUSG00000021972.15	novel	NA	NA	NA	NA	4898	1	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGTCCGGGATTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	65054847	65049047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_65049000_65054800
ES.11002.3	chr14	-	3416	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	-20	0	1	0	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCGGGATTTCT	7665	False	NA	NA	False	AATAAA	-14	NA	65187319	65049048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.4	chr14	-	2921	10	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	18.039736660091	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCGGGATTTCT	7680	False	NA	NA	False	AATAAA	-14	NA	65187304	65049048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65050869_65054465_65054586_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65140687_65140768_65187025
ES.11002.5	chr14	-	3271	12	NNC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	-415	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.1034382726099	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCTGTCCGGGATTTC	7249	False	NA	NA	False	AATAAA	-13	NA	65187735	65049049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65050869_65054465_65054586_65062747_65062820_65063049_65063139_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187651
ES.11002.8	chr14	-	3234	10	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	59	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.0999961659377	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGGCTGTCCGGGAT	7747	False	NA	NA	False	AATAAA	-10	NA	65187237	65049052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65050869_65054465_65054586_65063049_65063145_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ES.11002.9	chr14	-	3335	10	NIC	ENSMUSG00000021972.15	novel	3396	11	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	16.904963110808	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGGCTGTCCGGGAT	7656	False	NA	NA	False	AATAAA	-10	NA	65187328	65049052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65134098_65134576_65140687_65140768_65187025
ES.11003.1	chr14	-	4701	1	Antisense	novelGene_ENSMUSG00000021975.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGCCTAACCCAAGTCT	8038	False	NA	NA	False	ATTAAA	-11	NA	65254402	65249701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_65249700_65254400
ES.11004.1	chr14	-	4047	1	Intergenic	novelGene_9200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65281862	65277815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65277800_65281900
ES.11005.1	chr14	+	997	3	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5.5	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCTGGCCACGGTAATA	NA	False	NA	NA	False	CATAAA	-12	NA	65335125	65350041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_65335830_65338153_65338226_65349820
ES.11005.2	chr14	+	5795	3	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	5.5	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCACATCAGCTAATAGATA	NA	False	NA	NA	False	NA	NA	NA	65335170	65343514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_65335830_65338153_65340666_65340890
ES.11005.3	chr14	+	2160	3	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	3	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGGTAGCACACAATA	NA	False	NA	NA	False	ATTAAA	-16	NA	65335588	65350120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_65335830_65338153_65338226_65348273
ES.11005.4	chr14	+	464	3	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	3	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTTCCACGAGTCTG	NA	False	NA	NA	False	AGTAAA	-24	NA	65335628	65348464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_65335830_65338153_65338226_65348273
ES.11005.5	chr14	+	2370	4	Antisense	novelGene_ENSMUSG00000021978.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_3	2.86744175568088	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTCCTGTGTGTGAC	NA	False	NA	NA	False	CATAAA	-15	NA	65335667	65350287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_65335830_65338153_65338226_65338376_65338499_65348273
ES.11005.6	chr14	+	2096	1	Intergenic	novelGene_9201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACCCAGGGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65338797	65340893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65338800_65340900
ES.11006.1	chr14	-	6647	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	11	757	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	52.5346446536844	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTCAAATGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	65335543	65288751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65317925_65335445
ES.11006.10	chr14	-	6164	8	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.5292340778418	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335554	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65326265_65326457_65335445
ES.11006.11	chr14	-	5962	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387356	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
ES.11006.12	chr14	-	5788	6	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	68.5390399699325	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335501	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294373_65296433_65296579_65304131_65304260_65313032_65315639_65335445
ES.11006.13	chr14	-	5851	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	62.4864785373604	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387341	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65387258
ES.11006.14	chr14	-	5868	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	52.5346446536844	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335524	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65317925_65335445
ES.11006.15	chr14	-	5833	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	64.559189035248	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335525	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294373_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65317925_65335445
ES.11006.16	chr14	-	6293	7	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	56.8870713685358	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335544	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65318255_65335445
ES.11006.17	chr14	-	6651	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-3133	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.1162542313011	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	False	NA	-4	True	NA	NA	NA	65390437	65289512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65387575_65387727_65389704
ES.11006.18	chr14	-	4776	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.3895864283277	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	False	NA	-4	True	NA	NA	NA	65335577	65289512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296580_65304131_65304260_65313032_65314143_65315362_65315639_65317828_65317925_65335445
ES.11006.19	chr14	-	3593	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.5717056153018	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	False	NA	-4	True	NA	NA	NA	65387318	65289512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65315362_65315639_65317828_65317925_65387258
ES.11006.2	chr14	-	6715	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	11	755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.1904385171672	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATGTATTTCAAATGC	NA	False	NA	NA	False	AATAAA	-15	NA	65335543	65288753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317920_65335445
ES.11006.20	chr14	-	3333	5	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-62	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	71.0633520177595	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	False	NA	-4	True	NA	NA	NA	65335617	65289512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65335445
ES.11006.21	chr14	-	4725	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	66.432411563351	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTGGAGGTGTTT	NA	False	NA	-5	True	NA	NA	NA	65387341	65289513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65314143_65315362_65315639_65317828_65317925_65387258
ES.11006.22	chr14	-	6172	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	72.5292340778418	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65387333	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65318018_65318255_65387258
ES.11006.23	chr14	-	3610	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.9481881730803	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65335524	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65315362_65315639_65317828_65317925_65335445
ES.11006.24	chr14	-	5766	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.8079798258717	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65335518	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65314143_65314310_65315639_65317828_65317925_65335445
ES.11006.25	chr14	-	6011	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.837079002638	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65335510	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65292510_65292601_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317920_65335445
ES.11006.26	chr14	-	4690	9	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.0913556279794	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65335524	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65290629_65290869_65290990_65291998_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ES.11006.27	chr14	-	5988	7	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-2527	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.1904385171672	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGTTTGGAGGTGTT	NA	False	NA	-6	True	NA	NA	NA	65389831	65289514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65389704
ES.11006.28	chr14	-	6129	7	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	54	-45	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	69.3823945008146	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	-48	True	NA	NA	NA	65335500	65289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65318255_65335445
ES.11006.3	chr14	-	3115	4	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	79.3319327607462	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGAGGTGTTTTGTTA	NA	False	NA	0	True	NA	NA	NA	65387336	65289508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65387258
ES.11006.31	chr14	-	5335	4	ISM	ENSMUSG00000021978.10	ENSMUST00000225633.2	6013	7	29077	45	29077	-45	3prime_fragment	FALSE	canonical	3	155	junction_1	10.8730042868667	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	-48	True	NA	NA	NA	65306477	65289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131
ES.11006.32	chr14	-	4791	6	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-33	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	65.6579012762364	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	-48	True	NA	NA	NA	65387337	65289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65314648_65387278
ES.11006.33	chr14	-	6228	7	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	-33	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.1904385171672	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	-48	True	NA	NA	NA	65387337	65289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65318255_65387258
ES.11006.34	chr14	-	3464	6	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	22277	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	80.0939448397942	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	-48	True	NA	NA	NA	65313277	65289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65303213_65303316_65304131_65304260_65313032
ES.11006.35	chr14	-	4794	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-62	1245	-62	-1242	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGCAGTGGGAAACTTA	NA	False	NA	NA	False	AATAAA	-14	NA	65335617	65290753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ES.11006.36	chr14	-	3632	6	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	-2217	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	62.4864785373604	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGCTTATTTATATGT	NA	False	NA	NA	False	TTTAAA	-22	NA	65387339	65291728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65387258
ES.11006.37	chr14	-	3725	7	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	-2220	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	49.9355139710763	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCAAGGCTTATTTATA	NA	False	NA	NA	False	TTTAAA	-45	NA	65387339	65291731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65387258
ES.11006.38	chr14	-	3811	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-64	2230	-64	-2227	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCCATTCAAGGCTT	NA	False	NA	NA	False	TTTAAA	-38	NA	65335619	65291738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ES.11006.39	chr14	-	3580	6	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	21	-2227	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.6905352631387	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCCATTCAAGGCTT	NA	False	NA	NA	False	TTTAAA	-38	NA	65335533	65291738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ES.11006.4	chr14	-	6227	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.5549431294505	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGAGGTGTTTTGTTA	NA	False	NA	0	True	NA	NA	NA	65335569	65289508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65318018_65318255_65335445
ES.11006.40	chr14	-	2926	3	ISM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-61	23471	-61	2219	5prime_fragment	FALSE	canonical	3	124	junction_2	10.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCCTCTAGTTTTTATC	NA	False	NA	NA	False	NA	NA	NA	65335616	65312979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65315639_65317828_65317925_65335445
ES.11006.41	chr14	-	2813	3	FSM	ENSMUSG00000021978.10	ENSMUST00000223989.2	582	3	-34	-2197	-34	2197	multi-exon	FALSE	canonical	3	28	junction_2	58.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAGTACCCCACACTT	NA	False	NA	NA	False	AATAAA	-24	NA	65387338	65313001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65315639_65317828_65317925_65387258
ES.11006.42	chr14	-	5715	1	Intergenic	novelGene_9202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGTGTTGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	65350260	65344545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65344500_65350300
ES.11006.43	chr14	-	1630	3	NNC	ENSMUSG00000021978.10	novel	582	3	NA	NA	3	-31486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGCAGTATTAACTT	NA	False	NA	NA	False	NA	NA	NA	65387301	65346684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65347444_65347664_65348493_65387258
ES.11006.44	chr14	-	167	1	Intergenic	novelGene_9203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65376214	65376047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65376000_65376200
ES.11006.45	chr14	-	3312	1	Intergenic	novelGene_9204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGCTTATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	65386234	65382922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65382900_65386200
ES.11006.5	chr14	-	6058	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	-81	0	-81	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGAGGTGTTTTGTTA	NA	False	NA	0	True	NA	NA	NA	65335636	65289508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ES.11006.6	chr14	-	6037	8	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	26	1	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	69.6313909974869	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGGAGGTGTTTTGT	NA	False	NA	-2	True	NA	NA	NA	65335528	65289510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65290629_65290869_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65318255_65335445
ES.11006.7	chr14	-	5946	6	NIC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-67	1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTGGAGGTGTTTTGT	NA	False	NA	-2	True	NA	NA	NA	65335622	65289510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
ES.11006.8	chr14	-	5815	6	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	74.4166648002986	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387341	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294373_65296433_65296579_65304131_65304260_65313032_65315639_65387258
ES.11006.9	chr14	-	6102	8	NNC	ENSMUSG00000021978.10	novel	5977	7	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.305756679393	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65387339	65289511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65363080_65363238_65387258
ES.11007.1	chr14	+	1096	4	NNC	ENSMUSG00000114693.2	novel	589	3	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTTATGGCAGAATTAT	NA	False	NA	NA	False	TATAAA	-16	NA	65409788	65422785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65409884_65412146_65412735_65413951_65414128_65422548
ES.11008.1	chr14	-	6485	1	Genic_Genomic	ENSMUSG00000007989.8	novel	NA	NA	NA	NA	29169	6	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATTAGCATATTATT	NA	False	NA	-6	True	AATAAA	-22	NA	65436376	65429891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_65429900_65436400
ES.11009.1	chr14	+	1229	1	Intergenic	novelGene_9205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GATAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65492097	65493326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65492100_65493300
ES.1101.1	chr1	+	3836	1	Antisense	novelGene_ENSMUSG00000040648.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGCATGCAAAGTTAGA	NA	False	NA	NA	False	NA	NA	NA	97645211	97649047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_97645200_97649000
ES.11010.1	chr14	-	4959	7	NNC	ENSMUSG00000007989.8	novel	12734	7	NA	NA	24	-7329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.1417632755722	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGATTTTAGCAATAT	NA	False	NA	NA	False	ATTAAA	-15	NA	65499888	65437226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490814_65490913_65499780
ES.11010.2	chr14	-	5381	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	22	7331	22	-7331	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTGATTTTAGCAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	65499890	65437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.3	chr14	-	3487	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	43	9204	43	8066	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGATCGACCTGGGTTCT	NA	False	NA	NA	False	AATATA	-18	NA	65499869	65439101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.4	chr14	-	3287	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	10	9437	10	7833	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTACAAATG	NA	False	NA	NA	False	AGTAAA	-35	NA	65499902	65439334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.5	chr14	-	2850	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	3	9881	3	7389	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGCAAGGTTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	65499909	65439778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.6	chr14	-	2709	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	32	9993	32	7277	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTATGTGTGGTGACTG	NA	False	NA	NA	False	TATAAA	-26	NA	65499880	65439890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.7	chr14	-	1492	4	ISM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	36	42804	36	-25534	5prime_fragment	FALSE	canonical	3	18	junction_2	4.49691252107735	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTAGTGGCGTGTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	65499876	65472701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65473381_65477166_65477364_65490392_65490913_65499780
ES.11010.8	chr14	-	799	2	ISM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	10	60338	10	-43068	5prime_fragment	FALSE	canonical	3	24	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGGTTCTGCTCCTGA	NA	False	NA	NA	False	AATAGA	-17	NA	65499902	65490235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65490913_65499780
ES.11010.9	chr14	-	4101	1	Intergenic	novelGene_9206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGGACAATAATTGGAA	NA	False	NA	NA	False	TTTAAA	-16	NA	65499737	65495636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65495600_65499700
ES.11011.1	chr14	+	1288	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	23	2470	-14	0	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGTGAAAGGTCCT	2561	False	NA	NA	False	ATTAAA	-17	NA	65504089	65558950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
ES.11011.2	chr14	+	3670	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	111	0	-3	0	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCTATTGTAGGTAT	2649	False	NA	NA	False	AATAAA	-13	NA	65504177	65561420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
ES.11012.1	chr14	+	4452	10	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	64	3	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	16.9297750708808	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGCCTCTCTACTGA	NA	False	NA	NA	False	AATAAA	-20	NA	65595901	65636382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.10	chr14	+	3701	8	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-9353	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.7965893131056	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65623775	65636378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630550_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.11	chr14	+	3972	7	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-6847	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	30.3447780607398	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTAGTGTGTGCCTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	65626281	65636376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65626349_65628735_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65634218_65634388
ES.11012.3	chr14	+	4292	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28.7821125006487	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65595911	65636378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65596205_65622844_65622886_65623034_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.4	chr14	+	4957	9	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	41	junction_1	18.1929759797566	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTAGTGTGTGCCTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	65595932	65636377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.5	chr14	+	5148	10	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.5981521268891	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTCTCTACTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	65595974	65636384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65632539_65633408_65633667
ES.11012.6	chr14	+	1945	10	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	35	-208	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	16.9297750708808	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATAGGAGAGAGCCAA	NA	False	NA	NA	False	AATGAA	-14	NA	65596017	65633991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.7	chr14	+	4251	10	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6472802664872	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65596081	65636378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65596188_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11012.8	chr14	+	1801	11	NNC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.0282620905903	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGTGTGCCTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	65596090	65636378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667_65633794_65636254
ES.11012.9	chr14	+	4585	10	NNC	ENSMUSG00000034522.11	novel	811	2	NA	NA	8707	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6472802664872	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTCTCTACTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	65621548	65636384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65621980_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ES.11013.1	chr14	-	11437	15	NNC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	-8	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	126.809112529061	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTGTGGTGCTTTTT	3436	False	NA	NA	False	AATAAA	-18	NA	65830532	65767895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65793412_65793480_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.11	chr14	-	2613	16	NNC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_1	122.059912429193	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3484	False	NA	NA	False	AATAAA	-16	NA	65830484	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65768186_65768383_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.15	chr14	-	2816	15	NNC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	126.328370300804	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGTCGTCGTGTGGTG	3495	False	NA	NA	False	AATAAA	-12	NA	65830473	65767901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788945_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.16	chr14	-	3507	14	NIC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	26	2	intron_retention	FALSE	canonical	3	390	junction_13	28.4432373593318	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGTCGTCGTGTGGTG	3495	False	NA	NA	False	AATAAA	-12	NA	65830473	65767901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.18	chr14	-	2585	16	NNC	ENSMUSG00000022031.7	novel	2771	15	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_1	140.355675181147	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGAGTCGTCGTGTGGT	3450	False	NA	NA	False	AATAAA	-11	NA	65830518	65767902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65768186_65768383_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
ES.11013.19	chr14	-	2888	16	NNC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	163.170449394354	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGAGTCGTCGTGTGG	3444	False	NA	NA	False	AATAAA	-10	NA	65830524	65767903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815195_65815239_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.2	chr14	-	2866	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	-15	0	-15	0	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3429	False	NA	NA	False	AATAAA	-16	NA	65830539	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.22	chr14	-	2450	1	Intergenic	novelGene_9207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGGGGTCATTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	65795846	65793396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_65793400_65795800
ES.11013.3	chr14	-	2806	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	-35	0	-12	0	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3432	False	NA	NA	False	AATAAA	-16	NA	65830536	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
ES.11013.4	chr14	-	8776	5	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	34420	0	34418	0	3prime_fragment	FALSE	canonical	3	434	junction_3	14.5838095160352	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	65796081	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833
ES.11013.5	chr14	-	4150	14	NIC	ENSMUSG00000022031.7	novel	2851	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	390	junction_13	47.0855949780596	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3471	False	NA	NA	False	AATAAA	-16	NA	65830497	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65769050_65784582_65784665_65785314_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ES.11013.6	chr14	-	3454	2	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	43617	0	43615	0	intron_retention	FALSE	canonical	3	473	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3839	False	NA	NA	False	AATAAA	-16	NA	65786884	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_65769050_65784582
ES.11013.7	chr14	-	6657	1	NIC	ENSMUSG00000022031.7	novel	2771	15	NA	NA	55945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	65774554	65767897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_65767900_65774600
ES.11014.1	chr14	+	2627	6	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	20067	-5023	intron_retention	TRUE	non_canonical	0	0	junction_5	14.3944433723573	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	6283	False	NA	NA	False	NA	NA	NA	65862782	65880870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65862807_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65879998_65880039
ES.11014.2	chr14	+	1137	8	NNC	ENSMUSG00000061356.14	novel	2745	19	NA	NA	21172	-23	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.9952373391401	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTGGACTTTCTATAT	7388	False	NA	NA	False	AATAAA	-12	NA	65863887	65885870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65863975_65872451_65872617_65875999_65876158_65877431_65877571_65878687_65878797_65879306_65879444_65882458_65882550_65885619
ES.11015.1	chr14	+	3989	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	-196	1	-196	-1	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCTGATAAGTGGTCC	622	False	NA	NA	False	AATAAA	-18	NA	65903655	66002274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
ES.11015.2	chr14	+	3113	8	NIC	ENSMUSG00000022032.15	novel	3794	9	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.7829667938676	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	824	False	NA	NA	False	AATAAA	-19	NA	65903857	66002275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65904196_65908005_65908124_65927216_65927346_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
ES.11015.3	chr14	+	3942	10	NNC	ENSMUSG00000022032.15	novel	3794	9	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	19.0833131165994	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGATGTTGCTGATAAG	865	False	NA	NA	False	AATAAA	-12	NA	65903898	66002268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_65999137_65999340_66000170
ES.11015.4	chr14	+	6454	8	ISM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	282	0	248	0	intron_retention	FALSE	canonical	3	27	junction_2	7.92309978506403	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	1100	False	NA	NA	False	AATAAA	-19	NA	65904133	66002275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033
ES.11015.5	chr14	+	3408	8	NNC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	50	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.5047921303271	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTGCTGATAAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	65913975	66002270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_65914057_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
ES.11015.6	chr14	+	3553	8	NIC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	58	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.8172541453592	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTGATAAGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	65913983	66002272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_65914208_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
ES.11015.7	chr14	+	176	1	Intergenic	novelGene_9208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	65947900	65948076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_65947900_65948100
ES.11016.1	chr14	+	2066	9	NNC	ENSMUSG00000022033.10	novel	1720	8	NA	NA	-1997	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	353.027066065762	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCATTATCTGTTTT	NA	False	NA	24	True	AATAAA	-40	NA	66041288	66055270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66041853_66043178_66043260_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ES.11016.10	chr14	+	181	1	Intergenic	novelGene_9209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	3838	False	NA	NA	False	NA	NA	NA	66048802	66048983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_66048800_66049000
ES.11016.11	chr14	+	1848	4	NIC	ENSMUSG00000022033.10	novel	1720	8	NA	NA	6835	-2	intron_retention	FALSE	canonical	3	729	junction_1	19.2930615046504	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCAGCATTATCTGTTT	5551	False	NA	23	True	AATAAA	-39	NA	66050515	66055269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66051426_66052620_66052751_66054048_66054226_66054638
ES.11016.2	chr14	+	1731	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	-9	-2	-9	2	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTATCTGTTTTTAA	NA	False	NA	27	True	AATAAA	-43	NA	66043276	66055273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ES.11016.3	chr14	+	857	6	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	4	2570	4	1378	5prime_fragment	FALSE	canonical	3	729	junction_5	61.7847877717485	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGATGTAGGAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	66043289	66052701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620
ES.11016.6	chr14	+	2862	7	NIC	ENSMUSG00000022033.10	novel	1720	8	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	739	junction_5	56.3964143856288	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCATTATCTGTTTT	NA	False	NA	24	True	AATAAA	-40	NA	66043337	66055270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66052751_66054048_66054226_66054638
ES.11016.7	chr14	+	4857	5	NIC	ENSMUSG00000022033.10	novel	1720	8	NA	NA	-48	-2	intron_retention	FALSE	canonical	3	759	junction_1	44.6339276783928	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCAGCATTATCTGTTT	NA	False	NA	23	True	AATAAA	-39	NA	66043337	66055269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66054226_66054638
ES.11016.9	chr14	+	1523	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCATTATCTGTTTT	NA	False	NA	24	True	AATAAA	-40	NA	66043649	66055270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ES.11017.1	chr14	-	3528	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	52	-667	-34	667	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGGTGGCGCATGCCTT	6396	False	NA	NA	False	AATAAA	-18	NA	66071391	66055819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.10	chr14	-	5032	10	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	11	intron_retention	TRUE	non_canonical	1	6	junction_7	323.146337679318	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGCTTGTGAGAAATCAA	6419	False	NA	0	True	ATTAAA	-25	NA	66071368	66056475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.11	chr14	-	4978	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-9	11	intron_retention	FALSE	canonical	3	933	junction_6	66.0449657430451	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGCTTGTGAGAAATCAA	6421	False	NA	0	True	ATTAAA	-25	NA	66071366	66056475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.13	chr14	-	2255	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	464.458867931273	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGCTTGTGAGAAATC	6420	False	NA	-2	True	ATTAAA	-23	NA	66071367	66056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059221_66061566_66061708_66062294_66062385_66063928_66064061_66065917_66065973_66067110_66067202_66068453_66068583_66069082_66069244_66070112_66070191_66071250
ES.11017.14	chr14	-	6194	8	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	5	intron_retention	FALSE	canonical	3	934	junction_5	65.4859386682768	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGTGGCTTGTGAGA	6420	False	NA	-6	True	ATTAAA	-19	NA	66071367	66056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66064738_66065917_66065973_66067110_66069244_66070112_66070191_66071250
ES.11017.15	chr14	-	7905	7	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	5	intron_retention	FALSE	canonical	3	933	junction_4	75.8655609175424	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGTGGCTTGTGAGA	6420	False	NA	-6	True	ATTAAA	-19	NA	66071367	66056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.17	chr14	-	4474	10	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-42	4	intron_retention	FALSE	non_canonical	1	6	junction_7	320.540785332738	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCAGTGGCTTGTGAG	6388	False	NA	-7	True	ATTAAA	-18	NA	66071399	66056482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66065973_66067110_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.18	chr14	-	5532	8	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-14	4	intron_retention	FALSE	canonical	3	933	junction_5	70.2398224162136	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCAGTGGCTTGTGAG	6416	False	NA	-7	True	ATTAAA	-18	NA	66071371	66056482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.2	chr14	-	3464	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	10	-561	10	561	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTACTGGTTTATTGT	6354	False	NA	0	True	NA	NA	NA	66071433	66055925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.20	chr14	-	3866	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_8	306.66789854825	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCAGTGGCTTGTGA	6439	False	NA	-8	True	ATTAAA	-17	NA	66071348	66056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.22	chr14	-	6222	8	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	2	intron_retention	FALSE	canonical	3	934	junction_5	63.1299275708601	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTCAGTGGCTTGTG	6420	False	NA	-9	True	ATTAAA	-16	NA	66071367	66056484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66064061_66064616_66064738_66065917_66065973_66067110_66069244_66070112_66070191_66071250
ES.11017.23	chr14	-	3460	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	11	2	intron_retention	FALSE	canonical	3	933	junction_7	64.172991511275	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTCAGTGGCTTGTG	6355	False	NA	-9	True	ATTAAA	-16	NA	66071432	66056484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.24	chr14	-	6567	8	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-9	0	intron_retention	TRUE	non_canonical	0	0	junction_5	362.915124726295	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6421	False	NA	-11	True	ATTAAA	-14	NA	66071366	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66064738_66065917_66065973_66067110_66067432_66067639_66069244_66070112_66070191_66071250
ES.11017.25	chr14	-	4573	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	933	junction_6	64.7721969675261	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.26	chr14	-	7304	7	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	933	junction_4	63.8531300894656	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6371	False	NA	-11	True	ATTAAA	-14	NA	66071416	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.27	chr14	-	8888	6	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	0	intron_retention	FALSE	non_canonical	1	6	junction_3	424.36182674694	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6419	False	NA	-11	True	ATTAAA	-14	NA	66071368	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.28	chr14	-	6756	8	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	0	intron_retention	FALSE	non_canonical	1	6	junction_5	362.547224228677	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.29	chr14	-	5214	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	933	junction_7	64.7841620638948	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6419	False	NA	-11	True	ATTAAA	-14	NA	66071368	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.3	chr14	-	5209	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	1	561	intron_retention	FALSE	canonical	3	933	junction_6	64.7721969675261	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTACTGGTTTATTGT	6345	False	NA	0	True	NA	NA	NA	66071442	66055925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.30	chr14	-	4089	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	934	junction_7	60.0316788798698	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66069244_66070112_66070191_66071250
ES.11017.31	chr14	-	4531	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	933	junction_6	63.4389470278314	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.32	chr14	-	5982	9	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	0	intron_retention	FALSE	non_canonical	1	6	junction_6	338.992417872436	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6420	False	NA	-11	True	ATTAAA	-14	NA	66071367	66056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66064738_66065917_66065973_66067110_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.37	chr14	-	2963	12	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	384.162930310556	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6420	False	NA	-12	True	ATTAAA	-13	NA	66071367	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66070749_66070877_66071250
ES.11017.38	chr14	-	2829	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	301.292565457563	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6416	False	NA	-12	True	ATTAAA	-13	NA	66071371	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069233_66070112_66070191_66071250
ES.11017.39	chr14	-	2776	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	308.436768236214	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6414	False	NA	-12	True	ATTAAA	-13	NA	66071373	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067136_66068453_66069244_66070112_66070191_66071250
ES.11017.4	chr14	-	5498	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	560	intron_retention	FALSE	canonical	3	933	junction_6	66.8767523134908	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTACTGGTTTATTG	6419	False	NA	-1	True	NA	NA	NA	66071368	66055926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.42	chr14	-	3975	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	933	junction_7	60.1738222891723	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6419	False	NA	-12	True	ATTAAA	-13	NA	66071368	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.44	chr14	-	2801	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	306.492022734687	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6476	False	NA	-12	True	ATTAAA	-13	NA	66071311	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059212_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.46	chr14	-	2845	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	306.785935140449	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6441	False	NA	-12	True	ATTAAA	-13	NA	66071346	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059221_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.48	chr14	-	2569	8	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	364.62482815371	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6420	False	NA	-12	True	ATTAAA	-13	NA	66071367	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66068453_66069244_66070112_66070191_66071250
ES.11017.50	chr14	-	3930	10	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	42	1	42	-1	intron_retention	FALSE	canonical	3	933	junction_8	49.161864172231	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTCAGTGGCTT	6386	False	NA	-12	True	ATTAAA	-13	NA	66071401	66056487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112
ES.11017.51	chr14	-	5573	9	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-9	-2	intron_retention	FALSE	non_canonical	1	6	junction_6	339.698188654282	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTGTTCAGTGGCT	6421	False	NA	-13	True	ATTAAA	-12	NA	66071366	66056488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66067432_66067638_66069244_66070112_66070191_66071250
ES.11017.54	chr14	-	4934	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	933	junction_6	66.8767523134908	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCATTGTTCAGTGGC	6420	False	NA	-14	True	ATTAAA	-11	NA	66071367	66056489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.55	chr14	-	2627	11	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-31	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	302.76684098494	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCATTGTTCAGTGGC	6399	False	NA	-14	True	ATTAAA	-11	NA	66071388	66056489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069016_66070112_66070191_66071250
ES.11017.56	chr14	-	2333	12	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	294.161169069661	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCATTGTTCAGTGG	6420	False	NA	-15	True	ATTAAA	-10	NA	66071367	66056490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66068583_66069082_66069244_66070112_66070191_66071250
ES.11017.57	chr14	-	3027	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	-1026	912	-1026	-912	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTACTATGTGGGA	5318	False	NA	NA	False	ACTAAA	-16	NA	66072469	66057398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.58	chr14	-	1961	11	NNC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-16	-912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	306.785935140449	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTACTATGTGGGA	6414	False	NA	NA	False	ACTAAA	-16	NA	66071373	66057398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66057548_66059029_66059221_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.59	chr14	-	2637	5	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	5419	912	370	-912	intron_retention	FALSE	canonical	3	966	junction_4	28.8129745080233	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTACTATGTGGGA	NA	False	NA	NA	False	ACTAAA	-16	NA	66066024	66057398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928
ES.11017.6	chr14	-	6265	8	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-10	554	intron_retention	FALSE	canonical	3	933	junction_5	62.6952460522408	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTTAGTACTGGT	6420	False	NA	-7	True	NA	NA	NA	66071367	66055932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66067202_66068453_66069244_66070112_66070191_66071250
ES.11017.60	chr14	-	4197	3	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	-14	27	intron_retention	FALSE	canonical	3	1081	junction_1	21	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATTTTTTTTTTTTTT	6416	False	NA	NA	False	NA	NA	NA	66071371	66065245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66069244_66070112_66070191_66071250
ES.11017.8	chr14	-	3787	3	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	7865	-553	1078	553	intron_retention	FALSE	canonical	3	1010	junction_2	13	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCATTTTAGTACTGG	NA	False	NA	-8	True	NA	NA	NA	66063578	66055933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_66057548_66059029_66059191_66061566
ES.11017.9	chr14	-	2912	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	13	-12	13	12	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTGTGAGAAATCAAT	6357	False	NA	1	True	ATTAAA	-26	NA	66071430	66056474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ES.11018.1	chr14	+	181	1	Intergenic	novelGene_9210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTGGTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	66074260	66074441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_66074300_66074400
ES.11019.1	chr14	+	4106	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	2	-1878	2	1878	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGTCTATCTCAAATTC	NA	False	NA	NA	False	GATAAA	-25	NA	66074752	66105934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.10	chr14	+	4058	8	NIC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	18	2008	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	86.2975393978441	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGATTTCCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	66074826	66106064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66094142_66094346_66097618_66097665_66102578
ES.11019.11	chr14	+	1906	5	ISM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	16798	3	16740	-3	3prime_fragment	FALSE	canonical	3	243	junction_2	9.20597631976098	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCATTGATATCTGAA	NA	False	NA	28	True	AATAAA	-17	NA	66091548	66104053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.12	chr14	+	4521	1	Genic_Genomic	ENSMUSG00000022035.7	novel	NA	NA	NA	NA	28821	4094	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66103629	66108150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_66103600_66108200
ES.11019.2	chr14	+	2201	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	44	-15	-11	15	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTAGAACTTGTTTTC	NA	False	NA	46	True	AATAAA	-35	NA	66074794	66104071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.3	chr14	+	2123	8	NIC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	86.3017960415657	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCATTGATATCTGAA	NA	False	NA	28	True	AATAAA	-17	NA	66074806	66104053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66074934_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.4	chr14	+	2171	9	NNC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.8850861132448	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATATCTGAATTCTT	NA	False	NA	33	True	AATAAA	-22	NA	66074809	66104058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093981_66094148_66094346_66097618_66097665_66102578
ES.11019.5	chr14	+	4179	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	61	-2010	3	2010	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATTTCCTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	66074811	66106066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.6	chr14	+	1099	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	61	1070	3	-17	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCTACTTCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	66074811	66102986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.7	chr14	+	2255	10	NNC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.512755386566	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCATTGATATCTGAA	NA	False	NA	28	True	AATAAA	-17	NA	66074820	66104053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093388_66093487_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.8	chr14	+	917	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	74	1239	16	-186	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTAGGGAAAGGAGAA	NA	False	NA	NA	False	AATATA	-21	NA	66074824	66102817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.11019.9	chr14	+	2189	9	NNC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	82.8996946616814	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGGGCATTGATATC	NA	False	NA	24	True	AATAAA	-13	NA	66074824	66104049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66074934_66077896_66077985_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ES.1102.1	chr1	+	2417	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	-387	16	-387	-16	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATAACATAAATGAAAC	NA	False	NA	NA	False	AATAAA	-39	NA	97697509	97720678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.2	chr1	+	1838	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	4	204	-3	-204	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATGCGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	97697900	97720490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.3	chr1	+	1707	8	NIC	ENSMUSG00000026333.15	novel	2046	8	NA	NA	-2	-123	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	18.8148877222268	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTTCTATATGGGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	97697901	97720571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_97697981_97703171_97703318_97705050_97705245_97710862_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.4	chr1	+	1708	9	NNC	ENSMUSG00000026333.15	novel	2046	8	NA	NA	2	-205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.580904176062	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCATGCGTAGAATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	97697905	97720489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710795_97710918_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.5	chr1	+	1557	8	FSM	ENSMUSG00000026333.15	ENSMUST00000027571.13	2494	8	-11	948	7	-208	multi-exon	FALSE	canonical	3	8	junction_3	17.1939714162035	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATACCATGCGTAGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	97697910	97720486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710918_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.6	chr1	+	3022	6	NNC	ENSMUSG00000026333.15	novel	2046	8	NA	NA	812	-208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.1864823710294	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATACCATGCGTAGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	97705935	97720486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_97706312_97709419_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ES.1102.7	chr1	+	3961	2	ISM	ENSMUSG00000026333.15	ENSMUST00000027571.13	2494	8	15906	-2392	8704	2392	3prime_fragment	FALSE	canonical	3	53	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAGATGGTCCTTCGT	NA	False	NA	NA	False	NA	NA	NA	97713827	97723826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_97713984_97720021
ES.11020.1	chr14	-	178	1	Intergenic	novelGene_9211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACTTTGTA	NA	False	NA	NA	False	NA	NA	NA	66129728	66129550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_66129600_66129700
ES.11021.1	chr14	+	1758	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	55	-3	55	3	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTGTTTTTTATTT	NA	False	NA	16	True	AATAAA	-23	NA	66205986	66218999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
ES.11022.1	chr14	-	2279	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	-23	7	-23	-7	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATATCTTTTTGCCCTT	NA	False	NA	NA	False	ATTAAA	-9	NA	66246679	66224241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
ES.11022.2	chr14	-	178	1	Intergenic	novelGene_9212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGAAAAGTATAT	5064	False	NA	NA	False	NA	NA	NA	66239057	66238879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_66238900_66239100
ES.11023.1	chr14	+	172	1	Intergenic	novelGene_9213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	66248258	66248430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_66248300_66248400
ES.11024.1	chr14	-	170	1	Intergenic	novelGene_9214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGGAGCAAAGCA	6055	False	NA	NA	False	NA	NA	NA	66268693	66268523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_66268500_66268700
ES.11025.1	chr14	-	1979	18	NIC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	51.9626562740861	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	-2	True	AATAAA	-19	NA	66361986	66321822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ES.11025.2	chr14	-	5127	18	NIC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	171	junction_14	18.9877031779075	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	-2	True	AATAAA	-19	NA	66361947	66321822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ES.11025.5	chr14	-	2075	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	-37	-3	-37	0	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	-2	True	AATAAA	-19	NA	66361986	66321822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ES.11025.6	chr14	-	5268	18	NNC	ENSMUSG00000022040.9	novel	2035	19	NA	NA	-63	-1	intron_retention	FALSE	canonical	3	6	junction_17	49.1630294042954	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTTTCTTGTGTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	66362012	66321826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361703
ES.11025.8	chr14	-	1825	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	16	194	16	-194	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAGATCGGGAAGAGA	NA	False	NA	NA	False	AATGAA	-19	NA	66361933	66322019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ES.11026.1	chr14	+	2619	5	Antisense	novelGene_ENSMUSG00000059456.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATCCAAAGGAGTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	66412140	66430154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_66412257_66420442_66420491_66422232_66422355_66427064_66428124_66428880
ES.11026.2	chr14	+	3548	6	Antisense	novelGene_ENSMUSG00000059456.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAAAGGAGTAGAATTA	NA	False	NA	NA	False	AATAAA	-20	NA	66412150	66430158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_66412257_66413118_66413215_66416076_66416159_66420442_66420491_66422232_66422355_66427064
ES.11026.3	chr14	+	2878	6	Antisense	novelGene_ENSMUSG00000059456.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.894427190999916	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCCAAAGGAGTAGAATT	NA	False	NA	NA	False	AATAAA	-19	NA	66412166	66430157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_66412257_66420442_66420491_66422232_66422355_66427064_66428483_66428880_66428970_66429046
ES.11026.4	chr14	+	3331	4	Antisense	novelGene_ENSMUSG00000059456.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAAAGGAGTAGAATTA	NA	False	NA	NA	False	AATAAA	-20	NA	66412189	66430158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_66412257_66420442_66420491_66422232_66422355_66427064
ES.11027.1	chr14	-	4018	31	FSM	ENSMUSG00000059456.14	ENSMUST00000022622.14	4034	31	16	0	16	0	multi-exon	FALSE	canonical	2	2	junction_25	4.30103346753881	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGACTGTGTCGGTTATT	NA	False	NA	1	True	ATTAAA	-26	NA	66518485	66390705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
ES.11027.2	chr14	-	3483	28	NNC	ENSMUSG00000059456.14	novel	3863	30	NA	NA	-17460	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	4.53790619036936	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTGACTGTGTCGGTT	NA	False	NA	-2	True	ATTAAA	-23	NA	66425191	66390708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66425061
ES.11027.3	chr14	-	3305	26	NNC	ENSMUSG00000059456.14	novel	3863	30	NA	NA	-17199	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.67606672321942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTAGCTTGACTGT	NA	False	NA	-9	True	ATTAAA	-16	NA	66424930	66390715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395807_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891
ES.11027.4	chr14	-	1767	10	NNC	ENSMUSG00000059456.14	novel	3863	30	NA	NA	-2872	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.4165793143004	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGGTTAGCTTGACT	NA	False	NA	-11	True	ATTAAA	-14	NA	66404227	66390717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66391719_66393420_66393502_66393750_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115
ES.11027.5	chr14	-	3780	19	NIC	ENSMUSG00000059456.14	novel	3863	30	NA	NA	-5060	-2	intron_retention	FALSE	canonical	3	7	junction_11	3.31895045138752	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGGTTAGCTTGACT	NA	False	NA	-11	True	ATTAAA	-14	NA	66412791	66390717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621
ES.11027.6	chr14	-	7787	26	NIC	ENSMUSG00000059456.14	novel	4034	31	NA	NA	16	-2	intron_retention	FALSE	canonical	0	0	junction_16	4.41379655172279	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGGTTAGCTTGACT	NA	False	NA	-11	True	ATTAAA	-14	NA	66518415	66390717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66395869_66395979_66396127_66400473_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66413072_66413191_66414511_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
ES.11027.7	chr14	-	3239	26	NNC	ENSMUSG00000059456.14	novel	3863	30	NA	NA	-17203	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	4.62791529740984	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGGTTAGCTTGAC	NA	False	NA	-12	True	ATTAAA	-13	NA	66424934	66390718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415212_66415484_66415626_66416040_66416096_66424891
ES.11027.8	chr14	-	1666	1	Intergenic	novelGene_9215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGCCTTTGGTGACTAA	NA	False	NA	NA	False	NA	NA	NA	66503618	66501952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_66502000_66503600
ES.11028.1	chr14	+	3754	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	-76	0	-76	0	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTTTATTGTC	NA	False	NA	31	True	NA	NA	NA	66534403	66548873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ES.11028.11	chr14	+	4453	5	FSM	ENSMUSG00000022043.20	ENSMUST00000121006.2	1296	5	-34	-3123	-10	-4	multi-exon	FALSE	canonical	3	340	junction_4	9.12414379544733	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGAGTTGTTTTTTAT	NA	False	NA	27	True	NA	NA	NA	66534504	66548869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260
ES.11028.12	chr14	+	3776	7	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	166.608739933481	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGAGTTGTTTTTTATT	NA	False	NA	28	True	NA	NA	NA	66534514	66548870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66544721_66544858_66545260_66545380_66546183
ES.11028.13	chr14	+	3628	6	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	139.239362250766	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTGAGTTGTTTTTT	NA	False	NA	25	True	NA	NA	NA	66534514	66548867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545371_66546183
ES.11028.14	chr14	+	6425	5	NIC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	2	-6	intron_retention	FALSE	canonical	3	340	junction_3	11.27774356864	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTGAGTTGTTTTTT	NA	False	NA	25	True	NA	NA	NA	66534516	66548867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66534999_66540629_66540726_66541453_66544498_66545260_66545380_66546183
ES.11028.15	chr14	+	3630	5	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.546716238165	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAATTCAGTGAGTTGT	NA	False	NA	20	True	NA	NA	NA	66534516	66548862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66534999_66540629_66540726_66541453_66541685_66545237_66545380_66546183
ES.11028.16	chr14	+	5997	4	NIC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	6039	-4	intron_retention	FALSE	canonical	3	340	junction_2	10.8730042868667	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGAGTTGTTTTTTAT	NA	False	NA	27	True	NA	NA	NA	66540577	66548869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66540726_66541453_66544498_66545260_66545380_66546183
ES.11028.2	chr14	+	3264	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	6	408	6	-408	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGGCTGTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	66534485	66548465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ES.11028.3	chr14	+	1106	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	-29	-20	6	20	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACATTTTCGATAACA	NA	False	NA	NA	False	AAAAAG	-36	NA	66534485	66535591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534500_66535600
ES.11028.4	chr14	+	3661	5	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	154.546716238165	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGAGTTGTTTTTTAT	NA	False	NA	27	True	NA	NA	NA	66534485	66548869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66534999_66540629_66540726_66541453_66541701_66545260_66545380_66546183
ES.11028.5	chr14	+	2624	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	24	1030	-11	-1030	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATACCATCTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	66534503	66547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ES.11028.6	chr14	+	4240	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	24	-586	-11	586	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCGGACAAAGAAATTACT	NA	False	NA	NA	False	NA	NA	NA	66534503	66549459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ES.11028.7	chr14	+	9285	5	NIC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	340	junction_3	9.54921462739214	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTTTATTGTC	NA	False	NA	31	True	NA	NA	NA	66534503	66548873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ES.11028.8	chr14	+	4648	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	-10	-3581	-10	3581	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAATTGATATATATGTG	NA	False	NA	NA	False	NA	NA	NA	66534504	66539152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_66534500_66539200
ES.11028.9	chr14	+	3735	7	NNC	ENSMUSG00000022043.20	novel	3678	6	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	166.373074744683	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTGAGTTGTTTTTT	NA	False	NA	25	True	NA	NA	NA	66534504	66548867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66544769_66544858_66545260_66545380_66546183
ES.11029.1	chr14	-	3232	3	FSM	ENSMUSG00000085984.8	ENSMUST00000153646.8	764	3	203	-2671	14	2671	multi-exon	FALSE	canonical	3	12	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTTCTTTTAAAACT	NA	False	NA	NA	False	NA	NA	NA	66534375	66530111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66533036_66533403_66533594_66534257
ES.11029.2	chr14	-	1602	1	Genic_Genomic	ENSMUSG00000085984.8	novel	NA	NA	NA	NA	6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGCAAGGCCTTACT	NA	False	NA	NA	False	TTTAAA	-41	NA	66534383	66532781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_66532800_66534400
ES.11029.3	chr14	-	1136	3	FSM	ENSMUSG00000085984.8	ENSMUST00000153646.8	764	3	-372	0	-372	0	multi-exon	FALSE	canonical	3	12	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGGCAAGGCCTTAC	NA	False	NA	NA	False	TTTAAA	-40	NA	66534950	66532782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_66533036_66533403_66533594_66534257
ES.1103.1	chr1	-	5569	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	321	-8	321	8	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATTGTCCTCTGC	9155	False	NA	86	True	AATAAA	-23	NA	97697815	97633764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.10	chr1	-	3515	1	NIC	ENSMUSG00000040648.16	novel	4055	3	NA	NA	5494	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTGTTCTTTCT	8137	False	NA	-15	True	ATTAAA	-37	NA	97637380	97633865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97633900_97637400
ES.1103.11	chr1	-	5767	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	22	93	22	-93	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTGTTCTTTCT	8856	False	NA	-15	True	ATTAAA	-37	NA	97698114	97633865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.14	chr1	-	5114	26	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	382	-99	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	61.1607717413703	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCATTTTATTTGTGTT	9216	False	NA	-21	True	ATTAAA	-31	NA	97697754	97633871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97689149_97689547_97697579
ES.1103.16	chr1	-	5625	30	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	337	-103	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	69.3342384617281	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAAGCATTTTATTTG	9171	False	NA	-25	True	ATTAAA	-27	NA	97697799	97633875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.17	chr1	-	5477	29	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	354	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	82.2304501919788	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTAAAGCATTTTATT	9188	False	NA	-27	True	ATTAAA	-25	NA	97697782	97633877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.18	chr1	-	5558	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	338	-106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	63.8298419588345	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATTTAAAGCATTTTAT	9172	False	NA	-28	True	ATTAAA	-24	NA	97697798	97633878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.19	chr1	-	8315	26	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	-100	-107	intron_retention	FALSE	canonical	0	0	junction_17	68.8482389026764	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATTTAAAGCATTTTA	NA	False	NA	-29	True	ATTAAA	-23	NA	97689363	97633879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97687090_97689149
ES.1103.2	chr1	-	5604	30	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	466	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	69.3342384617281	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCAGTGTATTGTCCTC	9300	False	NA	83	True	AATAAA	-20	NA	97697670	97633767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.20	chr1	-	5340	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	1	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.0708811397651	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAATTTAAAGCATTTT	8835	False	NA	-30	True	ATTAAA	-22	NA	97698135	97633880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97698012
ES.1103.22	chr1	-	6452	27	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	362	-110	intron_retention	FALSE	canonical	0	0	junction_16	45.9843039853573	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTGAATTTAAAGCATT	9196	False	NA	-32	True	ATTAAA	-20	NA	97697774	97633882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.24	chr1	-	5638	30	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	352	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.7181944071964	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9186	False	NA	-33	True	ATTAAA	-19	NA	97697784	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644366_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.25	chr1	-	4585	4	ISM	ENSMUSG00000040648.16	ENSMUST00000171129.8	3425	27	39059	-1506	-1172	-111	3prime_fragment	FALSE	canonical	3	195	junction_3	8.25967446224258	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	NA	False	NA	-33	True	ATTAAA	-19	NA	97650204	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558
ES.1103.26	chr1	-	5607	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	338	-111	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	65.6063068614596	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9172	False	NA	-33	True	ATTAAA	-19	NA	97697798	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.29	chr1	-	5056	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	445	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.5519829464687	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9279	False	NA	-33	True	ATTAAA	-19	NA	97697691	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.3	chr1	-	5658	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	403	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	65.6063068614596	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCAGTGTATTGTCCTC	9237	False	NA	83	True	AATAAA	-20	NA	97697733	97633767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.31	chr1	-	5373	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	382	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.9068596072586	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9216	False	NA	-33	True	ATTAAA	-19	NA	97697754	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668354_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.32	chr1	-	5369	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	404	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.2326708589218	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9238	False	NA	-33	True	ATTAAA	-19	NA	97697732	97633883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672994_97673113_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.33	chr1	-	5660	29	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	331	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	66.2908711048266	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9165	False	NA	-34	True	ATTAAA	-18	NA	97697805	97633884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697128_97697350_97697579
ES.1103.34	chr1	-	5261	3	FSM	ENSMUSG00000040648.16	ENSMUST00000137758.2	4055	3	-1318	112	79	-112	multi-exon	FALSE	canonical	3	196	junction_2	8.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	1325	False	NA	-34	True	ATTAAA	-18	NA	97644192	97633884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97635556_97639447_97639574_97640728
ES.1103.35	chr1	-	5054	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	388	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	75.8772693235596	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9222	False	NA	-34	True	ATTAAA	-18	NA	97697748	97633884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97689149_97689547_97697579
ES.1103.36	chr1	-	5277	27	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	364	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.1267527324606	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9198	False	NA	-34	True	ATTAAA	-18	NA	97697772	97633884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.37	chr1	-	5855	31	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	319	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	80.4552049279597	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTTGAATTTAAAGCA	9153	False	NA	-34	True	ATTAAA	-18	NA	97697817	97633884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697128_97697350_97697579
ES.1103.38	chr1	-	7636	27	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	367	-113	intron_retention	FALSE	canonical	0	0	junction_16	45.9388743605543	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACTTGAATTTAAAGC	9201	False	NA	-35	True	ATTAAA	-17	NA	97697769	97633885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97687090_97689149_97689547_97697579
ES.1103.40	chr1	-	5360	27	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	318	-113	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	58.0792281763638	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACTTGAATTTAAAGC	9152	False	NA	-35	True	ATTAAA	-17	NA	97697818	97633885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.41	chr1	-	5555	29	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	659	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	82.7421615992865	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACTTGAATTTAAAGC	9493	False	NA	-35	True	ATTAAA	-17	NA	97697477	97633885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97686991_97687090_97689149_97689547_97697128
ES.1103.44	chr1	-	5067	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	402	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.0684563453388	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACTTGAATTTAAAGC	9236	False	NA	-35	True	ATTAAA	-17	NA	97697734	97633885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640741_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97689149_97689547_97697579
ES.1103.45	chr1	-	4853	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	319	-114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	66.2297093455799	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGACTTGAATTTAAAG	9153	False	NA	-36	True	ATTAAA	-16	NA	97697817	97633886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
ES.1103.46	chr1	-	5599	29	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	328	-115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	67.7961379912648	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTGACTTGAATTTAAA	9162	False	NA	-37	True	ATTAAA	-15	NA	97697808	97633887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97663205_97663367_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673120_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.5	chr1	-	4968	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	321	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	66.2297093455799	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGCAGTGTATTGTCC	9155	False	NA	81	True	AATAAA	-18	NA	97697815	97633769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
ES.1103.51	chr1	-	4640	4	ISM	ENSMUSG00000040648.16	ENSMUST00000112845.8	6239	31	51162	118	2058	-118	intron_retention	FALSE	canonical	3	19	junction_3	87.720515781024	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	NA	False	NA	-40	True	ATTAAA	-12	NA	97646974	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266
ES.1103.52	chr1	-	5338	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	396	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.1349390385174	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9230	False	NA	-40	True	ATTAAA	-12	NA	97697740	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686923_97687090_97689149_97689547_97697579
ES.1103.55	chr1	-	5483	28	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	372	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0708811397651	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9206	False	NA	-40	True	ATTAAA	-12	NA	97697764	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635647_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.58	chr1	-	5188	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	340	-118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	87.1132487756306	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9174	False	NA	-40	True	ATTAAA	-12	NA	97697796	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
ES.1103.59	chr1	-	5458	28	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	351	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	80.090089877404	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9185	False	NA	-40	True	ATTAAA	-12	NA	97697785	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.63	chr1	-	3286	13	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	352	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	62.2139565442425	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9186	False	NA	-40	True	ATTAAA	-12	NA	97697784	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662814_97689449_97689547_97697579
ES.1103.65	chr1	-	5192	27	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	376	-118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	60.2041030467911	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9210	False	NA	-40	True	ATTAAA	-12	NA	97697760	97633890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97689149_97689547_97697579
ES.1103.66	chr1	-	7605	27	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	347	-119	intron_retention	FALSE	canonical	0	0	junction_12	57.8634512804312	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGAGTGACTTGAATT	9181	False	NA	-41	True	ATTAAA	-11	NA	97697789	97633891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668325_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672994_97673115_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97687090_97689149_97689547_97697579
ES.1103.68	chr1	-	5284	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	329	269	329	-269	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAATGTAAATGGATTA	9163	False	NA	NA	False	AATAAA	-19	NA	97697807	97634041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.69	chr1	-	4940	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	361	581	361	-581	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGATGCACAAGTAATT	9195	False	NA	NA	False	AATAAA	-29	NA	97697775	97634353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.7	chr1	-	4809	25	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	390	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	62.3041375476425	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATAGCAGTGTATTGT	9224	False	NA	79	True	AATAAA	-16	NA	97697746	97633771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97697579
ES.1103.70	chr1	-	4336	26	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	359	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	66.2297093455799	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTTTCTCCCTGATGC	9193	False	NA	NA	False	AATAAA	-19	NA	97697777	97634363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
ES.1103.71	chr1	-	4144	28	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	319	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	67.5849716657611	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTTTTTTATCTTCC	9153	False	NA	NA	False	AATAAA	-15	NA	97697817	97639146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97639574_97640728_97640870_97644266_97644330_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.72	chr1	-	3743	27	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	416	-1504	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	66.0571296583361	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGATGTAAACGCAG	9250	False	NA	NA	False	AATAAA	-23	NA	97697720	97640662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97640870_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.73	chr1	-	3860	28	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	362	-1504	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	71.5843244061566	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGATGTAAACGCAG	9196	False	NA	NA	False	AATAAA	-23	NA	97697774	97640662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.74	chr1	-	3558	25	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	352	-1504	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	70.6422791055202	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGATGTAAACGCAG	9186	False	NA	NA	False	AATAAA	-23	NA	97697784	97640662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.75	chr1	-	3711	26	ISM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	328	6890	328	-1504	5prime_fragment	FALSE	canonical	0	0	junction_14	46.9395526182344	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGATGTAAACGCAG	9162	False	NA	NA	False	AATAAA	-23	NA	97697808	97640662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.1103.76	chr1	-	3126	24	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	319	-1505	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	62.2272194710658	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAGATGTAAACGCA	9153	False	NA	NA	False	AATAAA	-22	NA	97697817	97640663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
ES.1103.8	chr1	-	5373	27	NNC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	378	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.1267527324606	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACACATAGCAGTGTAT	9212	False	NA	76	True	AATAAA	-13	NA	97697758	97633774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683648_97683697_97686893_97687090_97689149_97689547_97697579
ES.1103.9	chr1	-	5621	29	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	373	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	76.1625795283232	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATACACATAGCAGTG	9207	False	NA	73	True	AATAAA	-10	NA	97697763	97633777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673120_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683609_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ES.11030.1	chr14	+	3756	1	Intergenic	novelGene_9216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	66703478	66707234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_66703500_66707200
ES.11031.1	chr14	-	4102	15	NNC	ENSMUSG00000022048.9	novel	4520	14	NA	NA	70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.728431359084683	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTCTGTATTGAG	NA	False	NA	-2	True	AATAAA	-19	NA	67106067	67040313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67042349_67042695_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ES.11031.2	chr14	-	3752	13	NNC	ENSMUSG00000022048.9	novel	4520	14	NA	NA	6108	-81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.372677996249965	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGTGTTTATTATTC	NA	False	NA	-82	True	NA	NA	NA	67100029	67040393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67042349_67042510_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921
ES.11031.3	chr14	-	4537	3	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	33	55672	33	-55672	5prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGATTAGTTGATTTATC	NA	False	NA	NA	False	NA	NA	NA	67106104	67095984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_67100107_67102530_67102620_67105778
ES.11032.1	chr14	+	4609	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	-53	962	-53	-962	multi-exon	FALSE	canonical	3	15	junction_1	6.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTTTTCTGCTTCCTA	NA	False	NA	20	True	AATAAA	-20	NA	67148565	67157510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67148743_67152770_67152900_67153207
ES.11032.2	chr14	+	4734	4	NNC	ENSMUSG00000046204.15	novel	5518	3	NA	NA	-2	-963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.7756811551038	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTTCTGCTTCCT	NA	False	NA	19	True	AATAAA	-19	NA	67148616	67157509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_67148743_67151755_67151933_67152770_67152900_67153207
ES.11032.3	chr14	+	2713	4	NNC	ENSMUSG00000046204.15	novel	5518	3	NA	NA	1	-969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.4406682011537	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTGAGTTGTTTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	67148619	67157503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_67148743_67152770_67152900_67153207_67154803_67156637
ES.11032.4	chr14	+	4718	1	NIC	ENSMUSG00000046204.15	novel	5518	3	NA	NA	1021	-969	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTGAGTTGTTTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	67152785	67157503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67152800_67157500
ES.11033.1	chr14	-	181	1	Intergenic	novelGene_9217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGATTTGAAC	NA	False	NA	NA	False	NA	NA	NA	67189124	67188943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67188900_67189100
ES.11034.1	chr14	+	283	1	Intergenic	novelGene_9218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	67205877	67206160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67205900_67206200
ES.11035.1	chr14	+	2233	1	Intergenic	novelGene_9219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTCTGAAATATCAAAA	NA	False	NA	NA	False	NA	NA	NA	67213445	67215678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67213400_67215700
ES.11036.1	chr14	+	2701	1	Intergenic	novelGene_9220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTTGGAAGAATCAATAA	3479	False	NA	NA	False	NA	NA	NA	67241205	67243906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67241200_67243900
ES.11037.1	chr14	+	2073	1	Antisense	novelGene_ENSMUSG00000022052.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGGCAAGCA	979	False	NA	NA	False	NA	NA	NA	67298971	67301044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67299000_67301000
ES.11037.2	chr14	+	1350	1	Antisense	novelGene_ENSMUSG00000022052.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGGAAAAAAAAATATATAT	979	False	NA	NA	False	NA	NA	NA	67298971	67300321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67299000_67300300
ES.11038.1	chr14	-	3255	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-6	-11	-6	11	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTTGACTTCACTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	67246332	67222676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.10	chr14	-	1361	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-34	1911	-34	123	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCCGCTCTTTTCCT	NA	False	NA	-3	True	AATAAA	-18	NA	67246360	67224598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.11	chr14	-	1240	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	376	120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	293.262067100401	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGAGCCGCTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	67245929	67224601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245823
ES.11038.12	chr14	-	4227	1	NIC	ENSMUSG00000022051.16	novel	3259	7	NA	NA	-1589	69	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAGACACAAGAAAAAAAA	NA	False	NA	-57	True	NA	NA	NA	67228879	67224652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67224700_67228900
ES.11038.13	chr14	-	3979	12	Fusion	ENSMUSG00000022051.16_ENSMUSG00000022052.10	novel	770	7	NA	NA	-4	69	intron_retention	FALSE	canonical	0	0	junction_3	216.471019952646	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAGACACAAGAAAAAAAA	NA	False	NA	-57	True	NA	NA	NA	67309897	67224652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67226959_67231325_67231399_67236969_67237154_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.14	chr14	-	2600	5	NIC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	1	38	intron_retention	FALSE	canonical	3	688	junction_4	44.0078118065418	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACCAAAAAAAGA	NA	False	NA	-88	True	AAAACA	-36	NA	67246325	67224683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.15	chr14	-	1225	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	375	32	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	291.678864506841	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAAACAAAACCAAA	NA	False	NA	-94	True	AAAACA	-30	NA	67245930	67224689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245751
ES.11038.17	chr14	-	1691	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	375	32	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	292.074647992598	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAAACAAAACCAAA	NA	False	NA	-94	True	AAAACA	-30	NA	67245930	67224689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245285
ES.11038.18	chr14	-	1180	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	18	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.433239279804	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAGTTATAAAATGAAAA	NA	False	NA	-104	True	AAAACA	-20	NA	67246287	67224699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226952_67231325_67231399_67236969_67237154_67246136
ES.11038.19	chr14	-	1135	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	13	2090	-8	-56	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAACAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	67246313	67224777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.2	chr14	-	3730	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	349	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	292.074647992598	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTTGACTTCACTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	67245956	67222676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245285
ES.11038.20	chr14	-	1050	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-4	2192	-4	-158	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCCTCTTAGTAC	NA	False	NA	NA	False	NA	NA	NA	67246330	67224879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.21	chr14	-	903	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-5	2340	-5	-306	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTTGGGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	67246331	67225027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.22	chr14	-	171	1	Intergenic	novelGene_9221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATTATTTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	67249002	67248831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67248800_67249000
ES.11038.23	chr14	-	3628	8	ISM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	33539	-115	4624	115	3prime_fragment	FALSE	canonical	3	602	junction_4	76.7247931085579	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTGTTGTGTTGTTGT	NA	False	NA	NA	False	AAAAAG	-43	NA	67276354	67251389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323
ES.11038.24	chr14	-	4014	10	NNC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	233.725384919045	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAGACTTCATAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	67309895	67251506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276319_67276422_67307683_67307759_67309538
ES.11038.25	chr14	-	3845	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	10	155	1	-155	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTATTTTGCTAATCTC	NA	False	NA	NA	False	AATAAA	-29	NA	67309883	67251659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.26	chr14	-	3911	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	1	-169	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTCAACTTGATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	67309892	67251673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.27	chr14	-	3745	9	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	-8	-175	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	243.613904313773	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTCTTGTCAACTT	NA	False	NA	NA	False	AATAAA	-9	NA	67309901	67251679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67307683_67307759_67309538
ES.11038.28	chr14	-	3554	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-8	464	-8	154	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAATTTCTCATATCCTT	NA	False	NA	NA	False	AATACA	-12	NA	67309901	67251968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.29	chr14	-	3466	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-33	577	-33	41	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGCACTTTTACTAATT	NA	False	NA	33	True	TTTAAA	-20	NA	67309926	67252081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.3	chr14	-	3247	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	356	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	291.678864506841	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCATATATCATTTTG	NA	False	NA	-11	True	ATTAAA	-17	NA	67245949	67222686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245751
ES.11038.31	chr14	-	3284	11	NNC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	344.378004524099	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAATTTGTATTTAA	NA	False	NA	-7	True	AATAAA	-22	NA	67309688	67252121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67254103_67257164_67257257_67259719_67259893_67260474_67260640_67261081_67261260_67261976_67262112_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.32	chr14	-	3466	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAATTTGTATTTAA	NA	False	NA	-7	True	AATAAA	-22	NA	67309895	67252121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.33	chr14	-	3382	10	NNC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	231.298641864571	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTTGAATTTGTATTT	NA	False	NA	-9	True	AATAAA	-20	NA	67309893	67252123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67254103_67257173_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.35	chr14	-	3790	9	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	31	-4	intron_retention	FALSE	canonical	3	643	junction_3	60.1477347869394	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAAATTTGAATTTGTA	NA	False	NA	-12	True	AATAAA	-17	NA	67309853	67252126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.36	chr14	-	3297	9	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	-8	-5	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	243.613904313773	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTAAATTTGAATTTGT	NA	False	NA	-13	True	AATAAA	-16	NA	67309901	67252127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67307683_67307759_67309538
ES.11038.37	chr14	-	3319	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-4	695	-4	-77	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATGTCTTGTACGTTA	NA	False	NA	-85	True	ATTAAA	-35	NA	67309897	67252199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.38	chr14	-	3223	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-11	798	-11	-180	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGAGGACTCTGCGTG	NA	False	NA	NA	False	AATATA	-10	NA	67309904	67252302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.39	chr14	-	3291	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	-8	-180	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGAGGACTCTGCGTG	NA	False	NA	NA	False	AATATA	-10	NA	67309901	67252302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.4	chr14	-	3227	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	292.567667386538	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCCATATATCATTT	NA	False	NA	-13	True	ATTAAA	-15	NA	67246296	67222688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226754_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.40	chr14	-	2514	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-26	1522	-26	96	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCTTGGTTTTTTTTG	NA	False	NA	91	True	AATGAA	-18	NA	67309919	67253026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.42	chr14	-	2289	9	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	243.613904313773	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTTTCTTTTTCTT	NA	False	NA	0	True	AATAAA	-18	NA	67309883	67253117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67307683_67307759_67309538
ES.11038.43	chr14	-	2466	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTTTCTTTTTCTT	NA	False	NA	0	True	AATAAA	-18	NA	67309891	67253117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.46	chr14	-	2934	10	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	-26	3	intron_retention	FALSE	canonical	3	23	junction_7	297.026415252961	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTGGTTTTCTTTTTC	NA	False	NA	-2	True	AATAAA	-16	NA	67309919	67253119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
ES.11038.48	chr14	-	2412	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-26	1624	-26	-6	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGGAGAATCTGGTT	NA	False	NA	-11	True	AATAAA	-7	NA	67309919	67253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.49	chr14	-	2237	10	NNC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	227.869087389348	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGGAGAATCTGGTT	NA	False	NA	-11	True	AATAAA	-7	NA	67309883	67253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67254103_67257164_67257257_67259861_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.50	chr14	-	2143	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	-11	1878	-11	-260	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCATTCCTCCTCTCTGGC	NA	False	NA	-11	True	ATTAAA	-26	NA	67309904	67253382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.51	chr14	-	5192	9	ISM	ENSMUSG00000022052.10	ENSMUST00000225380.2	1988	10	-17	1270	-8	-270	5prime_fragment	FALSE	canonical	3	602	junction_3	70.9911966373296	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTTGTAGCATTCCT	NA	False	NA	-21	True	ATTAAA	-16	NA	67309901	67253392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.53	chr14	-	2564	9	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	-2	-272	intron_retention	FALSE	canonical	3	643	junction_3	60.1477347869394	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGCTTGTAGCATTC	NA	False	NA	-23	True	ATTAAA	-14	NA	67309895	67253394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ES.11038.54	chr14	-	7367	1	Intergenic	novelGene_9222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGCCTGAAATTTCCC	8460	False	NA	NA	False	NA	NA	NA	67299738	67292371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67292400_67299700
ES.11038.6	chr14	-	2919	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	18	-907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.433239279804	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGTGAGTTATTTTC	NA	False	NA	NA	False	GATAAA	-15	NA	67246287	67223594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67230698_67231399_67236969_67237154_67246136
ES.11038.7	chr14	-	2334	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	-4	908	-4	-908	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGTGAGTTATTTT	NA	False	NA	NA	False	GATAAA	-14	NA	67246330	67223595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ES.11038.9	chr14	-	2766	6	NNC	ENSMUSG00000022051.16	novel	3238	6	NA	NA	391	-911	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	292.074647992598	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTTGTGAGTTAT	NA	False	NA	NA	False	GATAAA	-11	NA	67245914	67223598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67245285
ES.11039.1	chr14	+	421	3	Intergenic	novelGene_9223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACATAGCATTCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	67421832	67433918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67421894_67422521_67422651_67433687
ES.1104.1	chr1	+	156	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97788591	97788747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_97788600_97788700
ES.11040.1	chr14	+	158	1	Intergenic	novelGene_9224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	67459646	67459804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67459600_67459800
ES.11041.1	chr14	-	177	1	Intergenic	novelGene_9225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATAAAGGCTAT	NA	False	NA	NA	False	NA	NA	NA	67603820	67603643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67603600_67603800
ES.11042.1	chr14	-	181	1	Intergenic	novelGene_9226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATTACAGTAA	NA	False	NA	NA	False	NA	NA	NA	67751363	67751182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67751200_67751400
ES.11043.1	chr14	-	130	1	Intergenic	novelGene_9227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67836094	67835964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_67836000_67836100
ES.11044.1	chr14	+	6340	3	Antisense	novelGene_ENSMUSG00000093726.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGTCTTTACAGTCCA	NA	False	NA	NA	False	NA	NA	NA	67911326	67933100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67915469_67917607_67917779_67931073
ES.11044.2	chr14	+	3908	4	Antisense	novelGene_ENSMUSG00000093726.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67912518	67933071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67915469_67917607_67917783_67931078_67931204_67932413
ES.11044.3	chr14	+	1252	1	Intergenic	novelGene_9228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATTACCTATCTGATA	NA	False	NA	NA	False	NA	NA	NA	67926295	67927547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_67926300_67927500
ES.11044.4	chr14	+	4502	2	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGTCTTTACAGTCCA	NA	False	NA	NA	False	NA	NA	NA	67927388	67933100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67931204_67932413
ES.11044.5	chr14	+	1470	2	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGGTCTTTACAGTCC	NA	False	NA	NA	False	NA	NA	NA	67931152	67933099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67931856_67932332
ES.11045.1	chr14	+	2978	2	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67935442	67941969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67937867_67941415
ES.11045.2	chr14	+	3583	1	Antisense	novelGene_ENSMUSG00000048922.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67938386	67941969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_67938400_67942000
ES.11046.1	chr14	-	6006	1	FSM	ENSMUSG00000093726.2	ENSMUST00000175674.2	1930	1	-2257	-1819	-2257	1819	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCTTGGGTGTTTACAA	NA	False	NA	NA	False	ATTAAA	-20	NA	67914812	67908806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67908800_67914800
ES.11046.13	chr14	-	7984	14	Fusion	ENSMUSG00000093726.2_ENSMUSG00000048922.19	novel	3841	15	NA	NA	2	-8	intron_retention	FALSE	canonical	0	0	junction_2	113.369480254848	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCATGCTCCTGTGTC	NA	False	NA	-10	True	NA	NA	NA	67952822	67910633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67915472_67917610_67917780_67931074_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.14	chr14	-	3747	1	FSM	ENSMUSG00000093726.2	ENSMUST00000175674.2	1930	1	-2227	410	-2227	-410	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGAATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	67914782	67911035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67911000_67914800
ES.11046.15	chr14	-	6135	15	Fusion	ENSMUSG00000093726.2_ENSMUSG00000048922.19	novel	3841	15	NA	NA	-40	-686	multi-exon	FALSE	canonical	0	0	junction_2	125.363145969407	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTACTTAGAGCTAGAAT	NA	False	NA	NA	False	AATACA	-20	NA	67952864	67911311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.16	chr14	-	5298	15	FSM	ENSMUSG00000093726.2_ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	237	-1694	2	-1484	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGTCATGCCTCTTC	NA	False	NA	NA	False	TATAAA	-21	NA	67952822	67912109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.17	chr14	-	5243	15	Fusion	ENSMUSG00000093726.2_ENSMUSG00000048922.19	novel	3841	15	NA	NA	19	-1489	multi-exon	FALSE	canonical	0	0	junction_2	137.085274369567	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCAGCTGTCATGCC	NA	False	NA	NA	False	TATAAA	-16	NA	67953040	67912114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.18	chr14	-	4429	14	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-23	950	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	142.59903648728	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGAATGGCTTGGCTGA	NA	False	NA	NA	False	NA	NA	NA	67952847	67912829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952390_67952455_67952672
ES.11046.19	chr14	-	4850	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	1	918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.866246923663	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTATGTTCATTCTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	67953129	67912861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.2	chr14	-	7138	15	FSM	ENSMUSG00000093726.2_ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	-118	-3179	-47	1	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGGGCCTTA	NA	False	NA	-1	True	NA	NA	NA	67953177	67910624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.20	chr14	-	4503	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	12	918	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	137.085274369567	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTATGTTCATTCTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	67953047	67912861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.26	chr14	-	4497	16	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	2	916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.329241992399	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAAATTATGTTCATTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	67952822	67912863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67913825_67913871_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.27	chr14	-	3734	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	34	97	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTGTAGTTGCCGA	NA	False	NA	87	True	NA	NA	NA	67953096	67913682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.29	chr14	-	3562	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	19	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.202933302675	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTTTCATTCATT	NA	False	NA	-3	True	NA	NA	NA	67953040	67913772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937657_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.30	chr14	-	3874	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	-9	-24	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGTAATCTGAGTTTC	NA	False	NA	-10	True	ATTAAA	-40	NA	67953068	67913779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.34	chr14	-	3660	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-5	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTTCAAATCGGTCAC	NA	False	NA	-26	True	ATTAAA	-24	NA	67953135	67913795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.36	chr14	-	5020	14	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-25	1	intron_retention	FALSE	canonical	0	0	junction_2	141.195445557404	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCCAGATTGTTCAAAT	NA	False	NA	-33	True	ATTAAA	-17	NA	67953084	67913802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.37	chr14	-	3469	16	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	42	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	163.554272337961	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCCAGATTGTTCAAAT	NA	False	NA	-33	True	ATTAAA	-17	NA	67953017	67913802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937692_67937748_67937859_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.39	chr14	-	3664	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.190858733745	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTTCCAGATTGTTCA	NA	False	NA	-36	True	ATTAAA	-14	NA	67953179	67913805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932470_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.40	chr14	-	3568	15	NNC	ENSMUSG00000048922.19	novel	3568	15	NA	NA	163	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.642639483253	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCTTCCAGATTGTTCA	NA	False	NA	-36	True	ATTAAA	-14	NA	67952661	67913805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952545
ES.11046.42	chr14	-	3664	16	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	19	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	169.161382511888	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAACTGTGCAGTCAT	NA	False	NA	-52	True	AATGAA	-10	NA	67953040	67913821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67938341_67938470_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.43	chr14	-	3554	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-12	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.611810621859	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAACTGTGCAGTCAT	NA	False	NA	-52	True	AATGAA	-10	NA	67953071	67913821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932484_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.46	chr14	-	3680	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	-37	198	34	-198	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTTTAGAATGACTTAT	NA	False	NA	NA	False	ACTAAA	-22	NA	67953096	67914001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.47	chr14	-	3444	16	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-2	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	157.717130754187	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGACCTTTAGAATGAC	NA	False	NA	NA	False	ACTAAA	-18	NA	67952826	67914005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67931800_67931839_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.50	chr14	-	3445	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-63	-265	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTTTCTGCAGTTT	NA	False	NA	83	True	NA	NA	NA	67953193	67914068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.54	chr14	-	4749	14	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-24	-272	intron_retention	FALSE	canonical	0	0	junction_2	128.647723207177	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCAGCAATGTGTTTCT	NA	False	NA	76	True	NA	NA	NA	67953083	67914075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.55	chr14	-	3310	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-14	-304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	110.056131318597	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTTGTTTTGTTAAA	NA	False	NA	44	True	AATATA	-18	NA	67952838	67914107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917769_67931069_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.56	chr14	-	3602	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	-68	307	3	-307	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCCTTTGTTTTGTT	NA	False	NA	41	True	AATATA	-15	NA	67953127	67914110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.57	chr14	-	3278	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-30	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.562831102952	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTTGTTTGTCTTT	NA	False	NA	20	True	AATACA	-23	NA	67952854	67914131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932470_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.59	chr14	-	6291	13	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-6	-328	intron_retention	FALSE	canonical	0	0	junction_2	133.287179511843	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTTGTTTGTCTTT	NA	False	NA	20	True	AATACA	-23	NA	67953065	67914131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67934192_67935387_67935621_67936137_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.6	chr14	-	6923	16	Fusion	ENSMUSG00000093726.2_ENSMUSG00000048922.19	novel	3841	15	NA	NA	-42	0	multi-exon	TRUE	canonical	0	0	junction_2	157.212156725306	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGTGTCTGGGCCTT	NA	False	NA	-2	True	NA	NA	NA	67952866	67910625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67915472_67917610_67917780_67931074_67931201_67931800_67931901_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.60	chr14	-	3158	14	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-29	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.259047891888	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTTGTTTGTCTTT	NA	False	NA	20	True	AATACA	-23	NA	67952853	67914131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931201_67934115_67934192_67935387_67935621_67936137_67936151_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.61	chr14	-	4729	14	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-34	-329	intron_retention	FALSE	canonical	0	0	junction_2	142.141025062848	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATATTTGTTTGTCTT	NA	False	NA	19	True	AATACA	-22	NA	67952858	67914132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.65	chr14	-	6085	13	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-14	-361	intron_retention	FALSE	canonical	0	0	junction_2	117.809491930357	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACATTAATTTCT	NA	False	NA	-13	True	AATAAA	-27	NA	67952838	67914164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.7	chr14	-	6798	15	Fusion	ENSMUSG00000093726.2_ENSMUSG00000048922.19	novel	3841	15	NA	NA	26	-1	multi-exon	FALSE	canonical	0	0	junction_2	124.651514230674	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCCTGTGTCTGGGCCT	NA	False	NA	-3	True	NA	NA	NA	67953104	67910626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.70	chr14	-	3194	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-33	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.67615509476	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGAAATACATTAATT	NA	False	NA	-16	True	AATAAA	-24	NA	67952857	67914167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944869_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.72	chr14	-	3329	15	NNC	ENSMUSG00000048922.19	novel	3568	15	NA	NA	-143	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.967303344587	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGAAATACATTAATT	NA	False	NA	-16	True	AATAAA	-24	NA	67953433	67914167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67953194
ES.11046.76	chr14	-	3327	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-48	-368	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAGTAGAAATACATT	NA	False	NA	-20	True	AATAAA	-20	NA	67953178	67914171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.77	chr14	-	3242	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	3	-368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	140.940952319815	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAGTAGAAATACATT	NA	False	NA	-20	True	AATAAA	-20	NA	67952821	67914171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931072_67931201_67932405_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.79	chr14	-	3332	16	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	2	-370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.808601517955	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTAAGTAGAAATACA	NA	False	NA	-22	True	AATAAA	-18	NA	67952822	67914173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67915472_67917610_67917780_67931074_67931201_67931800_67931905_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.80	chr14	-	3266	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-33	-370	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTAAGTAGAAATACA	NA	False	NA	-22	True	AATAAA	-18	NA	67952857	67914173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.82	chr14	-	7515	12	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	-36	-374	intron_retention	FALSE	canonical	0	0	junction_2	122.632488650958	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGACTTTAAGTAGAAA	NA	False	NA	-26	True	AATAAA	-14	NA	67952860	67914177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67915472_67917610_67917780_67931074_67934192_67935387_67935621_67936137_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.87	chr14	-	2625	14	NNC	ENSMUSG00000048922.19	novel	2419	8	NA	NA	4	1851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.049375107336	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAAGTTGATTTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	67952820	67929730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67930594_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.89	chr14	-	2602	14	NNC	ENSMUSG00000048922.19	novel	1124	8	NA	NA	-25	1850	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.733245592233	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAAGTTGATTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	67953084	67929731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67930573_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.90	chr14	-	3070	13	NIC	ENSMUSG00000048922.19	novel	2034	14	NA	NA	12	1850	combination_of_known_junctions	FALSE	canonical	3	113	junction_12	75.845237160945	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAAGTTGATTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	67953047	67929731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.91	chr14	-	2610	14	NNC	ENSMUSG00000048922.19	novel	1124	8	NA	NA	-15	1844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.268155673291	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTTATTAAAAGTTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	67953074	67929737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67930594_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.92	chr14	-	3028	13	NNC	ENSMUSG00000048922.19	novel	2034	14	NA	NA	1	1766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.569138993231	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATCAGTGCAAACTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	67952823	67929815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67931201_67932413_67932500_67934115_67934192_67935383_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11046.93	chr14	-	5596	1	NIC	ENSMUSG00000048922.19	novel	3568	15	NA	NA	-8322	-436	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCTTATAAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	67943752	67938156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67938200_67943800
ES.11046.94	chr14	-	4205	7	NNC	ENSMUSG00000048922.19	novel	1124	8	NA	NA	29	-436	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	155.873256917992	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCTTATAAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	67953101	67938156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
ES.11046.95	chr14	-	827	5	NNC	ENSMUSG00000048922.19	novel	3568	15	NA	NA	2	-12249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.072644854985	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCTTTTGGAAGGTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	67952822	67949969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67950254_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ES.11047.1	chr14	+	3166	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-172	-1692	-8	0	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953538	67979610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ES.11047.10	chr14	+	3113	12	FSM	ENSMUSG00000034327.18	ENSMUST00000156700.2	3098	12	-19	4	4	-4	multi-exon	FALSE	canonical	3	8	junction_4	31.9689932422906	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACGGCCTGTTTCTGCTCT	NA	False	NA	6	True	AATAAA	-18	NA	67953714	67979606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ES.11047.11	chr14	+	1600	11	ISM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	6	1481	6	-673	5prime_fragment	FALSE	canonical	3	52	junction_9	23.5253055240522	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAATGGGTTAGATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	67953716	67976437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825
ES.11047.14	chr14	+	2388	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	18	-1104	-5	-588	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGTCATTATCTGTG	NA	False	NA	NA	False	AATGAA	-15	NA	67953728	67979022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ES.11047.15	chr14	+	9634	4	NIC	ENSMUSG00000034327.18	novel	3098	12	NA	NA	13825	1	intron_retention	FALSE	canonical	3	84	junction_2	10.1980390271856	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTTTCCTGACTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	67967558	67979760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67970678_67970795_67975161_67975825_67975960_67977744
ES.11047.16	chr14	+	3812	2	ISM	ENSMUSG00000034327.18	ENSMUST00000152243.8	2528	11	18576	672	18228	-672	3prime_fragment	FALSE	canonical	3	84	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGGGTTAGATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	67971961	67976438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_67975161_67975825
ES.11047.17	chr14	+	1995	2	ISM	ENSMUSG00000034327.18	ENSMUST00000156700.2	3098	12	22091	6	22091	-6	3prime_fragment	FALSE	canonical	3	90	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACGGCCTGTTTCTGCT	NA	False	NA	4	True	AATAAA	-16	NA	67975824	67979604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_67975960_67977744
ES.11047.2	chr14	+	2940	12	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	33.5164940275803	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953559	67979608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ES.11047.3	chr14	+	2910	11	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	37.6256561404582	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGTTTCCTGACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	67953590	67979759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
ES.11047.5	chr14	+	2932	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	74	151	21	-2	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953620	67979608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
ES.11047.6	chr14	+	3059	11	NIC	ENSMUSG00000034327.18	novel	3098	12	NA	NA	21	-2	intron_retention	FALSE	canonical	3	8	junction_4	36.0976453525711	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953620	67979608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
ES.11047.7	chr14	+	9939	10	NIC	ENSMUSG00000034327.18	novel	3098	12	NA	NA	33	-2	intron_retention	FALSE	canonical	3	8	junction_4	31.0964251051626	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCCTGTTTCTGCTCTTG	NA	False	NA	8	True	AATAAA	-20	NA	67953632	67979608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67970678_67970795_67970892_67971589_67975161_67975825_67975960_67977744
ES.11047.8	chr14	+	3181	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-39	-1840	-39	-1	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGGTTTCCTGACTG	NA	False	NA	NA	False	ATTAAA	-15	NA	67953671	67979758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ES.11047.9	chr14	+	4795	11	ISM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	-19	-1689	-19	-3	intron_retention	FALSE	canonical	3	52	junction_9	23.5253055240522	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCTGTTTCTGCTCTT	NA	False	NA	7	True	AATAAA	-19	NA	67953691	67979607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825
ES.11048.1	chr14	+	6198	1	Genic_Genomic	ENSMUSG00000015812.9	novel	NA	NA	NA	NA	-1947	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCAAGTCCCACGAAC	NA	False	NA	NA	False	AATAAA	-11	NA	67980682	67986880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_67980700_67986900
ES.11048.2	chr14	+	2688	3	NNC	ENSMUSG00000015812.9	novel	411	3	NA	NA	-1053	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAGTCCCACGAACGTG	NA	False	NA	NA	False	AATAAA	-14	NA	67981576	67986883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_67981898_67983165_67985348_67986698
ES.11049.1	chr14	+	3718	1	Antisense	novelGene_ENSMUSG00000044447.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAATAAGAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	68010655	68014373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_68010700_68014400
ES.1105.1	chr1	-	4275	24	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	7	559	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	5.92422216983633	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGACTTGCTAAAAGAA	NA	False	NA	NA	False	ATTAAA	-10	NA	98023339	97748259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.11	chr1	-	3862	26	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	7.4946380833233	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGTCAGAGTGTATTTT	NA	False	NA	-8	True	AATAAA	-16	NA	98023328	97748820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_97983585_97983691_98023209
ES.1105.12	chr1	-	3557	24	NNC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	103	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.8938287051144	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCAGTCAGAGTGTATT	NA	False	NA	-10	True	AATAAA	-14	NA	98023243	97748822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97749714_97759179_97759274_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_97983585_97983691_98023209
ES.1105.13	chr1	-	3421	22	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	7.5439753860846	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAGCAGTCAGAGTGTA	NA	False	NA	-12	True	AATAAA	-12	NA	98023335	97748824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.14	chr1	-	5097	7	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	-4	97884	-4	14493	5prime_fragment	FALSE	canonical	3	17	junction_2	3.29983164553722	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAACCTCCCTCAATG	NA	False	NA	NA	False	NA	NA	NA	98023350	97846702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.3	chr1	-	3821	25	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	5.09884927105017	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTATTTTTGTGA	NA	False	NA	-3	True	AATAAA	-21	NA	98023387	97748815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.4	chr1	-	3740	24	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.92422216983633	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGAGTGTATTTTTGTG	NA	False	NA	-4	True	AATAAA	-20	NA	98023361	97748816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.5	chr1	-	3697	24	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	6.78790205930593	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGAGTGTATTTTTGTG	NA	False	NA	-4	True	AATAAA	-20	NA	98023345	97748816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.7	chr1	-	3516	23	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.87560441765162	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTGTATTTTTG	NA	False	NA	-6	True	AATAAA	-18	NA	98023343	97748818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_97749714_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.1105.8	chr1	-	3864	26	NNC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	7.4946380833233	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTGTATTTTTG	NA	False	NA	-6	True	AATAAA	-18	NA	98023250	97748818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98013034_98013218_98023209
ES.1105.9	chr1	-	4099	26	FSM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	-5	1	-5	0	multi-exon	FALSE	canonical	1	3	junction_12	6.89301095313216	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAGAGTGTATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	98023351	97748819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ES.11050.1	chr14	+	180	1	Intergenic	novelGene_9229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACTAA	4765	False	NA	NA	False	NA	NA	NA	68091479	68091659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_68091500_68091700
ES.11051.1	chr14	-	5283	1	Genic_Genomic	ENSMUSG00000044447.6	novel	NA	NA	NA	NA	8577	1035	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATAAGGTCTGATGCT	NA	False	NA	NA	False	AATAAA	-3	NA	67993831	67988548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_67988500_67993800
ES.11051.10	chr14	-	8585	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-151	1554	-141	-1554	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCGTGATATTGTTAC	NA	False	NA	NA	False	AATGAA	-18	NA	68171032	67991137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.12	chr14	-	6768	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-140	3360	-130	124	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGAGTTAGATGGGTT	NA	False	NA	NA	False	CATAAA	-21	NA	68171021	67992943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.16	chr14	-	7980	50	NIC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-192	0	intron_retention	FALSE	canonical	3	67	junction_19	9.73822295163377	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68171083	67993067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.17	chr14	-	6801	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-297	3484	-287	0	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68171178	67993067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.18	chr14	-	4420	39	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-59721	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.9265154478929	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68062129	67993067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67993367_67995428_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048
ES.11051.2	chr14	-	5792	9	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	163122	-350	-5351	350	3prime_fragment	FALSE	canonical	3	80	junction_2	10.4731800328267	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCCACTTAATCTATT	NA	False	NA	NA	False	GATAAA	-15	NA	68007759	67989233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680
ES.11051.21	chr14	-	6634	51	NIC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-163	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_49	15.3341970771215	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGAGTGAATTTTAT	NA	False	NA	-1	True	NA	NA	NA	68171054	67993069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68118647_68118732_68170740
ES.11051.22	chr14	-	6543	52	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	39477	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_51	14.5111817045914	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGAGTGAATTTTAT	NA	False	NA	-1	True	NA	NA	NA	68131404	67993069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68131222
ES.11051.23	chr14	-	8543	51	NIC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-131	-2	intron_retention	FALSE	canonical	3	67	junction_21	9.61299120981602	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGAGTGAATTTTAT	NA	False	NA	-1	True	NA	NA	NA	68171022	67993069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.25	chr14	-	6478	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-325	3835	-315	-351	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTGTCTCCTTTGAGG	NA	False	NA	1	True	NA	NA	NA	68171206	67993418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.27	chr14	-	6186	52	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	39481	-355	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_51	14.5111817045914	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCTACTGTCTCCTTT	NA	False	NA	-3	True	NA	NA	NA	68131400	67993422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68131222
ES.11051.28	chr14	-	6295	52	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-129	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.9842926859159	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGTCTACTGTCTCCT	NA	False	NA	-5	True	NA	NA	NA	68171020	67993424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000785_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.3	chr14	-	10504	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-291	-225	-281	225	multi-exon	TRUE	canonical	3	67	junction_21	9.78869405661972	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATCGCTGTCTGAGC	NA	False	NA	NA	False	AATAAA	-39	NA	68171172	67989358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.30	chr14	-	4833	44	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	0	17889	0	-14405	5prime_fragment	FALSE	canonical	3	67	junction_13	9.14583486045719	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGTCGCTTTGTAAAAC	NA	False	NA	NA	False	AATAAA	-16	NA	68170881	68007472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.31	chr14	-	2388	20	ISM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-124	61718	-114	1717	5prime_fragment	FALSE	canonical	3	71	junction_9	8.31911991935968	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACTCATATACTTCT	NA	False	NA	NA	False	CATAAA	-12	NA	68171005	68051301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.32	chr14	-	2243	3	ISM	ENSMUSG00000044447.6	ENSMUST00000224823.2	3954	18	-162	48657	-162	-48657	5prime_fragment	FALSE	canonical	3	73	junction_2	1.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	NA	False	NA	NA	False	TTTAAA	-11	NA	68171053	68101675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_68103522_68118647_68118732_68170740
ES.11051.4	chr14	-	8383	28	NIC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	-41532	206	intron_retention	FALSE	canonical	3	67	junction_20	10.2932316249053	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCTCTGCCCATCTA	NA	False	NA	NA	False	AATAAA	-20	NA	68043940	67989377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_67993972_67994556_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871
ES.11051.6	chr14	-	9961	53	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	39542	53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.5045472581949	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGGCTTTTCCCTACT	NA	False	NA	41	True	AATAAA	-14	NA	68131339	67989530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67992676_67992731_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68131222
ES.11051.7	chr14	-	10182	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-143	-51	-133	51	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTATGGCTTTTCCCTA	NA	False	NA	39	True	AATAAA	-12	NA	68171024	67989532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ES.11051.9	chr14	-	8492	52	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	39466	-1548	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_51	14.5111817045914	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATATTGTTACATGTCT	NA	False	NA	NA	False	AATGAA	-24	NA	68131415	67991131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68131222
ES.11052.1	chr14	-	150	1	Intergenic	novelGene_9230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68204207	68204057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_68204100_68204200
ES.11053.1	chr14	-	174	1	Intergenic	novelGene_9231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	68215080	68214906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_68214900_68215100
ES.11054.1	chr14	-	212	1	Intergenic	novelGene_9232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCAATAAAGGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	68224911	68224699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_68224700_68224900
ES.11055.1	chr14	+	2228	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-52	1204	-52	-1204	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTGTGGTTTTTACT	NA	False	NA	15	True	AATAAA	-29	NA	68321259	68325340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ES.11055.2	chr14	+	3421	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	-46	5	-46	-5	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGGTGTGCAGTCTT	NA	False	NA	7	True	AATAAA	-21	NA	68321265	68326539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ES.11055.3	chr14	+	2828	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	1	551	1	-551	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATTGCTCTGCATGT	NA	False	NA	NA	False	AATAAA	-13	NA	68321312	68325993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ES.11056.1	chr14	-	176	1	Intergenic	novelGene_9233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	68327260	68327084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_68327100_68327300
ES.11057.1	chr14	-	3116	3	FSM	ENSMUSG00000022054.12	ENSMUST00000022638.6	3334	3	-45	263	-45	-263	multi-exon	FALSE	canonical	3	13	junction_2	6.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAATGTGTGGTGATGT	NA	False	NA	-4	True	AATAAA	-19	NA	68362340	68356994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_68358834_68360269_68360395_68361188
ES.11057.3	chr14	-	2154	2	NNC	ENSMUSG00000022054.12	novel	3334	3	NA	NA	1	-270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGCCAAATGTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	68362294	68357001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_68358755_68361893
ES.11057.4	chr14	-	2251	4	NNC	ENSMUSG00000022054.12	novel	3334	3	NA	NA	1601	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGCCAAATGTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	68360694	68357001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_68358834_68359379_68359564_68360269_68360395_68360584
ES.11058.1	chr14	+	4317	1	Intergenic	novelGene_9234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGAGTCACTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	68364502	68368819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_68364500_68368800
ES.11059.1	chr14	+	186	1	Intergenic	novelGene_9235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAACTTAACGGAG	NA	False	NA	NA	False	NA	NA	NA	68574568	68574754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_68574600_68574800
ES.1106.1	chr1	+	1278	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATACAG	NA	False	NA	NA	False	NA	NA	NA	98299512	98300790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_98299500_98300800
ES.11060.1	chr14	+	159	1	Intergenic	novelGene_9236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	68760488	68760647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_68760500_68760600
ES.11061.1	chr14	+	172	1	Intergenic	novelGene_9237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGGGGTACAGAG	NA	False	NA	NA	False	NA	NA	NA	68923772	68923944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_68923800_68923900
ES.11062.1	chr14	+	3058	2	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481426	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031
ES.11062.10	chr14	+	1666	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481429	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485086_69486474
ES.11062.11	chr14	+	1809	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481429	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485087_69486332
ES.11062.12	chr14	+	5281	1	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481429	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69481400_69486700
ES.11062.13	chr14	+	1781	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	69481430	69486692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485085_69486339
ES.11062.4	chr14	+	1811	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481428	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485086_69486330
ES.11062.5	chr14	+	1923	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481428	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485086_69486218
ES.11062.7	chr14	+	1703	3	Antisense	novelGene_ENSMUSG00000034248.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCGTTCACGTGACCGC	NA	False	NA	NA	False	AAGAAA	-12	NA	69481429	69486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_69482806_69485031_69485086_69486437
ES.11063.1	chr14	-	5848	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	82	-3	-48	0	multi-exon	FALSE	canonical	3	50	junction_2	78	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTGGGGTCTTTGTGG	624	False	NA	-4	True	AATAAA	-16	NA	69522479	69479296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69482804_69485029_69487072_69522180
ES.11063.2	chr14	-	4640	4	FSM	ENSMUSG00000034248.8	ENSMUST00000184914.2	2212	4	-103	-2325	42	0	multi-exon	FALSE	canonical	3	36	junction_2	77.0512095225564	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGTGGGGTCTTTG	584	False	NA	-7	True	AATAAA	-13	NA	69522519	69479299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69482804_69485029_69485087_69486331_69487072_69522180
ES.11063.3	chr14	-	4533	4	NNC	ENSMUSG00000034248.8	novel	2212	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	82.4257241399795	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGTGGGGTCTTTG	584	False	NA	-7	True	AATAAA	-13	NA	69522519	69479299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69482804_69485029_69485087_69486438_69487072_69522180
ES.11063.4	chr14	-	4127	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	42	5	42	-2	multi-exon	FALSE	canonical	3	26	junction_2	79.79974937304	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCATTGTGGGGTCTT	584	False	NA	-9	True	AATAAA	-11	NA	69522519	69479301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
ES.11063.5	chr14	-	3568	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	42	2317	42	8	multi-exon	FALSE	canonical	3	50	junction_2	78	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCTTTTCATGGGGA	584	False	NA	0	True	NA	NA	NA	69522519	69481616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69482804_69485029_69487072_69522180
ES.11063.6	chr14	-	3361	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	42	2524	42	-199	multi-exon	FALSE	canonical	3	50	junction_2	78	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGACCTGTTTTGTTTTT	584	False	NA	NA	False	TATAAA	-20	NA	69522519	69481823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69482804_69485029_69487072_69522180
ES.11064.1	chr14	+	3079	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	-46	556	-46	498	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGACAACCAGGGACAT	7255	False	NA	NA	False	AATAAA	-44	NA	69574576	69604163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.11	chr14	+	2945	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-2	466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.5161209487452	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGACTTGACATTTTA	7323	False	NA	NA	False	AATAAA	-12	NA	69574644	69604131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594226_69594451_69594575_69596270_69596438_69599087_69599407_69601016_69601103_69601771_69601934_69602968
ES.11064.12	chr14	+	2891	12	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	1	465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.8694579332764	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGACTTGACATTTT	7326	False	NA	NA	False	AATAAA	-11	NA	69574647	69604130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.13	chr14	+	3201	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	2	470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.5826727037162	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTGACATTTTAAACA	7327	False	NA	NA	False	AATAAA	-16	NA	69574648	69604135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586563_69586720_69588151_69588646_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.14	chr14	+	4072	4	NIC	ENSMUSG00000095463.9	novel	1842	12	NA	NA	-4296	472	intron_retention	FALSE	canonical	3	160	junction_1	18.0800688297608	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	AATAAA	-18	NA	69595711	69604137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69596438_69599087_69601103_69601771_69601934_69602968
ES.11064.2	chr14	+	2994	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-43	473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	56.5456428226103	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGACATTTTAAACAGAA	7258	False	NA	NA	False	AATAAA	-19	NA	69574579	69604138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594556_69596284_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.3	chr14	+	3017	13	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-33	473	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7096334974091	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGACATTTTAAACAGAA	7268	False	NA	NA	False	AATAAA	-19	NA	69574589	69604138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.4	chr14	+	3079	14	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-23	473	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	72.1607344587979	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGACATTTTAAACAGAA	7278	False	NA	NA	False	AATAAA	-19	NA	69574599	69604138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584173_69584246_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.5	chr14	+	6971	10	NIC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-21	470	intron_retention	FALSE	canonical	3	160	junction_8	15.6568132922743	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTGACATTTTAAACA	7280	False	NA	NA	False	AATAAA	-16	NA	69574601	69604135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69596438_69599087_69601934_69602968
ES.11064.6	chr14	+	3118	10	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-19	-2243	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	26.1491448766069	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAAGTGGAAAAGCCAT	7282	False	NA	NA	False	NA	NA	NA	69574603	69600945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087
ES.11064.7	chr14	+	4689	12	NIC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-12	470	intron_retention	FALSE	canonical	3	160	junction_8	20.4692876167489	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTGACATTTTAAACA	7289	False	NA	NA	False	AATAAA	-16	NA	69574610	69604135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.8	chr14	+	3083	14	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-5	471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.1680484324889	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTGACATTTTAAACAG	7296	False	NA	NA	False	AATAAA	-17	NA	69574617	69604136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584173_69584246_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ES.11064.9	chr14	+	3647	12	NNC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	-5	462	intron_retention	FALSE	canonical	3	116	junction_8	29.8392386848133	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAAACAGACTTGACAT	7296	False	NA	NA	False	AATAAA	-8	NA	69574617	69604127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601934_69602968
ES.11065.1	chr14	+	184	1	Intergenic	novelGene_9238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTTAGTACCACCAT	NA	False	NA	NA	False	NA	NA	NA	69671678	69671862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69671700_69671900
ES.11066.1	chr14	+	3045	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	-38	582	-38	472	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	AATAAA	-18	NA	69792834	69822387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.10	chr14	+	6276	11	NIC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	8	473	intron_retention	FALSE	canonical	3	160	junction_8	15.1802503273167	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGACATTTTAAACAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	69792880	69822388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69814688_69817337_69819353_69820021_69820184_69821218
ES.11066.11	chr14	+	2940	12	NIC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	8	473	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	64.1411150871896	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGACATTTTAAACAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	69792880	69822388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.12	chr14	+	4612	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	1	464	intron_retention	FALSE	canonical	2	6	junction_2	56.8250904890693	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACAGACTTGACATTT	NA	False	NA	NA	False	AATAAA	-10	NA	69792889	69822379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804813_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.13	chr14	+	4542	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	1	466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.5862174031804	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGACTTGACATTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	69792897	69822381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69812930_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.14	chr14	+	5652	3	NIC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-5209	470	intron_retention	FALSE	canonical	3	160	junction_1	20.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTGACATTTTAAACA	5242	False	NA	NA	False	AATAAA	-16	NA	69813048	69822385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69814688_69817337_69820184_69821218
ES.11066.2	chr14	+	3019	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-36	472	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7614711414806	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	AATAAA	-18	NA	69792836	69822387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.3	chr14	+	3938	13	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-22	351	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_8	28.7614711414806	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTACCTTCTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	69792850	69823320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.4	chr14	+	3674	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-22	472	intron_retention	FALSE	canonical	3	116	junction_8	29.8962392947164	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	AATAAA	-18	NA	69792850	69822387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69820184_69821218
ES.11066.5	chr14	+	2938	14	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-22	472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.8386398529057	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGACATTTTAAACAGA	NA	False	NA	NA	False	AATAAA	-18	NA	69792850	69822387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811096_69811197_69812411_69812472_69812693_69812825_69814520_69814591_69814653_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.6	chr14	+	2933	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-21	466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.9147859486111	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGACTTGACATTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	69792851	69822381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803189_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11066.8	chr14	+	4586	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	-5	466	intron_retention	FALSE	canonical	3	116	junction_8	25.1159295538782	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGACTTGACATTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	69792867	69822381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69819353_69820021_69820184_69821218
ES.11066.9	chr14	+	4673	12	NIC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	5	471	intron_retention	FALSE	canonical	3	160	junction_8	20.520499728099	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTGACATTTTAAACAG	NA	False	NA	NA	False	AATAAA	-17	NA	69792877	69822386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ES.11067.1	chr14	+	3081	14	FSM	ENSMUSG00000034205.17	ENSMUST00000022660.14	5316	14	99	2136	99	0	multi-exon	FALSE	canonical	0	0	junction_1	1.66410058867569	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTTTGGTTTTTTGT	6136	False	NA	NA	False	NA	NA	NA	69846615	69931147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_69846744_69871332_69871740_69882144_69882321_69898087_69898300_69901348_69901572_69904715_69904900_69910830_69910983_69913124_69913293_69915261_69915425_69919543_69919788_69926476_69926593_69927582_69927720_69929762_69929875_69930488
ES.11067.2	chr14	+	5012	15	NNC	ENSMUSG00000034205.17	novel	5316	14	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.68426087465023	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCGTCTCGGATTT	6136	False	NA	NA	False	AATAAA	-20	NA	69846615	69933283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_69846744_69871332_69871740_69882144_69882321_69898087_69898300_69901348_69901572_69904715_69904900_69910830_69910983_69913124_69913293_69915261_69915425_69919543_69919788_69926476_69926593_69927582_69927720_69929762_69929875_69930488_69932947_69933151
ES.11067.3	chr14	+	182	1	Intergenic	novelGene_9239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGCTTTAGTACCACC	NA	False	NA	NA	False	NA	NA	NA	69889953	69890135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69890000_69890100
ES.11068.1	chr14	+	122	1	Intergenic	novelGene_9240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	69935355	69935477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69935400_69935500
ES.11069.10	chr14	-	1729	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.9922122755392	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944984	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935102_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.12	chr14	-	1354	7	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	81.5953770476953	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTGCGTCCAAGTGC	NA	False	NA	-5	True	AATAAA	-16	NA	69944975	69934754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69942724_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.13	chr14	-	3005	6	NNC	ENSMUSG00000034194.19	novel	1958	7	NA	NA	-21	1	intron_retention	FALSE	canonical	0	0	junction_3	83.0252973496632	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTGCGTCCAAGTGC	NA	False	NA	-5	True	AATAAA	-16	NA	69944963	69934754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942539_69943328_69943995_69944134_69944502
ES.11069.14	chr14	-	7560	4	NIC	ENSMUSG00000034194.19	novel	1958	7	NA	NA	311	1	intron_retention	FALSE	canonical	3	195	junction_3	13.8804418757713	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTGCGTCCAAGTGC	NA	False	NA	-5	True	AATAAA	-16	NA	69944631	69934754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69936129_69937408_69943328_69943995_69944134_69944502
ES.11069.15	chr14	-	1820	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	70.5801035732321	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	False	NA	-6	True	AATAAA	-15	NA	69944960	69934755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944787
ES.11069.2	chr14	-	1724	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.9280002666328	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCGTCCAAGTGCGGT	NA	False	NA	-2	True	AATAAA	-19	NA	69944984	69934751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942539_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.3	chr14	-	1730	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	-1	-3	-1	3	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCGTCCAAGTGCGG	NA	False	NA	-3	True	AATAAA	-18	NA	69945034	69934752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.4	chr14	-	1763	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.2609461695506	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944959	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944845
ES.11069.5	chr14	-	1310	8	NNC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	71.6234484463499	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944985	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943041_69944078_69944134_69944502_69944631_69944954
ES.11069.6	chr14	-	1522	6	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	84.5567265213123	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944994	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69935052_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.7	chr14	-	2698	7	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	11	2	intron_retention	FALSE	canonical	3	88	junction_6	45.1651291251214	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69945022	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ES.11069.9	chr14	-	1583	7	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	18	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	78.1984654580894	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGCGTCCAAGTGCG	NA	False	NA	-4	True	AATAAA	-17	NA	69944984	69934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69935052_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ES.1107.1	chr1	+	500	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAATAA	NA	False	NA	NA	False	AATAAA	-21	NA	99117574	99118074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_99117600_99118100
ES.11070.1	chr14	-	3090	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-14	-427	-7	427	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGTTGTCCCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	69969997	69954021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.10	chr14	-	2547	9	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	-7	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	92.291318659991	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAAACACCAGGT	NA	False	NA	-19	True	AAGAAA	-41	NA	69969997	69954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.13	chr14	-	1702	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-36	983	-29	-983	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATAGCCTGCAGTTC	NA	False	NA	NA	False	NA	NA	NA	69970019	69955431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.2	chr14	-	2726	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	-75	-2	-68	2	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTCTATTCTT	NA	False	NA	0	True	ATTAAA	-17	NA	69970058	69954446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.3	chr14	-	3684	8	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	245	junction_5	16.4043299410956	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGTTGTTGTCTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	69970002	69954449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69957317_69957560_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.4	chr14	-	4050	6	NIC	ENSMUSG00000034190.10	novel	3115	8	NA	NA	-25	-2	intron_retention	FALSE	canonical	3	274	junction_2	11.9733036376766	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTTGTTGTCTAT	NA	False	NA	-4	True	ATTAAA	-13	NA	69970015	69954450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69955750_69955963_69956147_69956577_69957317_69957560_69958842_69967571_69967744_69969639
ES.11070.6	chr14	-	2907	9	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	-18	-17	intron_retention	FALSE	canonical	3	245	junction_6	15.4495145554804	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAAACACCAGGT	NA	False	NA	-19	True	AAGAAA	-41	NA	69970008	69954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11070.7	chr14	-	3233	7	NIC	ENSMUSG00000034190.10	novel	3115	8	NA	NA	3	-17	intron_retention	FALSE	canonical	3	270	junction_4	11.8380272380532	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAAACACCAGGT	NA	False	NA	-19	True	AAGAAA	-41	NA	69969980	69954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_69955750_69955963_69956147_69956577_69957317_69957560_69957610_69958376_69958842_69967571_69967744_69969639
ES.11070.9	chr14	-	3110	8	FSM	ENSMUSG00000034190.10	ENSMUST00000225036.2	3115	8	-12	17	-12	-17	multi-exon	FALSE	canonical	3	245	junction_5	16.4788051875178	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAAACACCAGGT	NA	False	NA	-19	True	AAGAAA	-41	NA	69970002	69954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_69955750_69955963_69956147_69956577_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ES.11071.1	chr14	+	1418	3	Intergenic	novelGene_9241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTCCACCTTATTT	NA	False	NA	NA	False	NA	NA	NA	69970227	69976463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69970738_69972044_69972176_69975686
ES.11071.2	chr14	+	3197	4	Intergenic	novelGene_9242	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_2	0.471404520791032	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTGGTCGTGATG	NA	False	NA	NA	False	NA	NA	NA	69970274	69983320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69970738_69975686_69975837_69978173_69978299_69980861
ES.11071.3	chr14	+	2779	3	Intergenic	novelGene_9243	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAGGAAAGAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	69970283	69977515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69971118_69972044_69972161_69975686
ES.11071.4	chr14	+	2411	3	Intergenic	novelGene_9244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAGGAAAGAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	69970286	69977515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69970738_69972044_69972176_69975686
ES.11072.1	chr14	+	175	1	Intergenic	novelGene_9245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	69993210	69993385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_69993200_69993400
ES.11073.1	chr14	-	125	1	Intergenic	novelGene_9246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69998221	69998096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_69998100_69998200
ES.11074.1	chr14	+	2247	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	0	797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTATTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	70004920	70020920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015161_70015265_70017952_70018023_70019680
ES.11074.10	chr14	+	2513	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	5	-657	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCGGCCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	70004938	70021203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680
ES.11074.11	chr14	+	1848	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	8	419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGCCACTGCTGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	70004941	70020542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015161_70015265_70017952_70018023_70019680
ES.11074.12	chr14	+	2974	9	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	17	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.2277604206414	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAGAGCAGTGTAC	NA	False	NA	-5	True	NA	NA	NA	70004950	70021851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010830_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680_70021043_70021212
ES.11074.2	chr14	+	1447	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTATCATATTATTGT	NA	False	NA	NA	False	NA	NA	NA	70004926	70020126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015161_70015265_70017952_70018023_70019680
ES.11074.3	chr14	+	2910	9	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	6	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	23.1179043167844	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	False	NA	-4	True	NA	NA	NA	70004926	70021852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015161_70015265_70017952_70018023_70019680_70021021_70021283
ES.11074.4	chr14	+	3182	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTGTACGTGGCCCTC	NA	False	NA	4	True	NA	NA	NA	70004926	70021860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680
ES.11074.5	chr14	+	2276	9	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.1179043167844	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	False	NA	-4	True	NA	NA	NA	70004926	70021852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680_70020242_70021139
ES.11074.6	chr14	+	1556	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	-2	117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.7556501863572	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGCATCCCGGATTA	NA	False	NA	NA	False	NA	NA	NA	70004931	70020240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015161_70015265_70017952_70018023_70019680
ES.11074.7	chr14	+	3166	8	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.7556501863572	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	False	NA	-4	True	NA	NA	NA	70004931	70021852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013724_70015169_70015265_70017952_70018023_70019680
ES.11074.8	chr14	+	1019	6	NNC	ENSMUSG00000022074.7	novel	2787	6	NA	NA	1	-1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	22.5831795812724	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTGTCTGTGTATCC	NA	False	NA	NA	False	NA	NA	NA	70004934	70015359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160
ES.11074.9	chr14	+	3550	9	NNC	ENSMUSG00000022074.7	novel	3179	8	NA	NA	1	651	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	23.1179043167844	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGGGTTGTGGGTTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	70004934	70022511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015160_70015265_70017952_70018023_70019680_70020999_70021273
ES.11075.1	chr14	+	5658	7	Antisense	novelGene_ENSMUSG00000022075.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAACTGCACCCAGG	NA	False	NA	NA	False	NA	NA	NA	70028041	70043050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_70031500_70033342_70033470_70033724_70034745_70035591_70035776_70037128_70037229_70038064_70038267_70042483
ES.11076.1	chr14	-	5342	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-16	-4	-16	4	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTACTGTTTTATA	NA	False	NA	0	True	AATACA	-23	NA	70043101	70022434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11076.10	chr14	-	2993	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	367	1962	-44	-1962	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCCTGTAAGGACTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	70042718	70024400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11076.11	chr14	-	3153	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-37	2206	-37	-2206	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGGCTTGTCTGTATTG	NA	False	NA	NA	False	AATAGA	-26	NA	70043122	70024644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11076.12	chr14	-	3413	13	NNC	ENSMUSG00000022075.8	novel	5322	10	NA	NA	-11152	-2212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.7696778504074	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTACTCGGGCTTGTCT	2755	False	NA	NA	False	AATAGA	-20	NA	70054237	70024650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70047704_70047784_70050860_70051216_70053295_70053439_70053911
ES.11076.13	chr14	-	3037	12	NNC	ENSMUSG00000022075.8	novel	5322	10	NA	NA	-10278	-2215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.9140237011782	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTGTACTCGGGCTTG	3629	False	NA	NA	False	AATAGA	-17	NA	70053363	70024653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70047704_70047812_70050860_70051216_70053295
ES.11076.2	chr14	-	5633	13	NNC	ENSMUSG00000022075.8	novel	5322	10	NA	NA	-11132	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.3228451689028	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCTTGTACTGTTT	2775	False	NA	-4	True	AATACA	-19	NA	70054217	70022438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70047704_70047812_70050860_70051216_70053295_70053439_70053911
ES.11076.3	chr14	-	8827	3	ISM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	11030	0	6216	0	intron_retention	FALSE	canonical	3	93	junction_1	13.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCTTGTACTGTTT	NA	False	NA	-4	True	AATACA	-19	NA	70032055	70022438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_70025185_70025306_70025413_70026080
ES.11076.5	chr14	-	5808	13	NNC	ENSMUSG00000022075.8	novel	5322	10	NA	NA	-11128	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.4376711965009	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACAAGTCTTGTACTG	2779	False	NA	-7	True	AATACA	-16	NA	70054213	70022441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70047704_70047812_70050860_70051216_70053295_70053439_70053729
ES.11076.6	chr14	-	4033	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	400	889	-11	-889	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTACAATTGTGTGGTAC	NA	False	NA	NA	False	ATTAAA	-21	NA	70042685	70023327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11076.7	chr14	-	4050	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-5	1277	-5	-1277	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGGAGAACAGGCTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	70043090	70023715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11076.8	chr14	-	3773	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	-37	1586	-37	-1586	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTGAATGGAGGCCTC	NA	False	NA	-1	True	AAAAAG	-28	NA	70043122	70024024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ES.11077.1	chr14	+	7067	3	Intergenic	novelGene_9247	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAAGCAGCTTTAG	NA	False	NA	NA	False	AAGAAA	-45	NA	70054317	70061500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70059248_70059329_70059706_70059739
ES.11078.1	chr14	-	174	1	Intergenic	novelGene_9248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGGAAAAGAAAAAA	1281	False	NA	NA	False	NA	NA	NA	70055711	70055537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70055500_70055700
ES.11079.1	chr14	-	312	1	Intergenic	novelGene_9249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTGACACGTCGAAA	3709	False	NA	NA	False	AATAAA	-14	NA	70065418	70065106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70065100_70065400
ES.1108.1	chr1	-	473	1	FSM	ENSMUSG00000082431.4	ENSMUST00000117372.2	597	1	382	-258	382	258	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	99718368	99717895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_99717900_99718400
ES.11080.1	chr14	+	2136	1	FSM	ENSMUSG00000033730.5	ENSMUST00000223747.2	3876	1	1738	2	1738	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTTGTCTTGTTTTCT	NA	False	NA	75	True	TATAAA	-18	NA	70317925	70320061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70317900_70320100
ES.11081.1	chr14	+	1548	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	-30	249	-30	-249	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACAGTGTACTTTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	70337523	70375406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ES.11081.2	chr14	+	3800	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	-14	249	-14	-249	intron_retention	FALSE	canonical	3	54	junction_3	8.9511143987546	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACAGTGTACTTTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	70337539	70375406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184
ES.11081.3	chr14	+	1570	10	NNC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	-8	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.8817258699156	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACAGTGTACTTTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	70337563	70375406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70337646_70347848_70347911_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ES.11081.4	chr14	+	3791	8	NIC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	-8	-242	intron_retention	FALSE	canonical	3	6	junction_5	24.8825814003061	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTACTTTAACTGACAC	NA	False	NA	NA	False	AGTAAA	-18	NA	70337563	70375413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366444_70366966_70367008_70371898_70372041_70372184
ES.11081.5	chr14	+	3148	9	NNC	ENSMUSG00000022089.10	novel	1767	9	NA	NA	-4	-245	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.2855566480155	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTGTACTTTAACTGA	NA	False	NA	NA	False	AGTAAA	-15	NA	70337567	70375410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70372947
ES.11081.6	chr14	+	604	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	26	3405	-7	275	5prime_fragment	FALSE	canonical	3	54	junction_3	8.9511143987546	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCGGTTCTATGGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	70337579	70372250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184
ES.11082.1	chr14	-	3753	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	-28	0	-28	0	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391288	70375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.11	chr14	-	4160	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	334	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	50.6865613353283	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGTGTGAGTCTTTGT	NA	False	NA	42	True	AATAAA	-16	NA	70390926	70375618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70390304
ES.11082.12	chr14	-	3599	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	102	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.2165988718501	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGTGTGAGTCTTTG	NA	False	NA	41	True	AATAAA	-15	NA	70391158	70375619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389030_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.13	chr14	-	6650	18	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	90	-5	intron_retention	FALSE	canonical	0	0	junction_7	54.0229990750768	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCAAGTGTGAGTCTT	NA	False	NA	39	True	AATAAA	-13	NA	70391170	70375621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377994_70378316_70379297_70379391_70379620_70379808_70380538_70380847_70380962_70381036_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.14	chr14	-	5968	15	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	101	-9	intron_retention	FALSE	canonical	0	0	junction_5	45.0938364040215	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391159	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70379297_70379391_70379620_70379808_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389914_70390112_70390207_70391075
ES.11082.15	chr14	-	4342	20	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	-28	-9	intron_retention	FALSE	canonical	0	0	junction_7	39.4028838743781	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391288	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.16	chr14	-	4038	20	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	155	-9	intron_retention	FALSE	canonical	0	0	junction_7	51.1010080075783	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391105	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70379981_70380494_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.19	chr14	-	3504	20	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	118	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	51.7712312757929	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391142	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70391075
ES.11082.20	chr14	-	4327	19	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	92	-9	intron_retention	FALSE	canonical	0	0	junction_8	40.3914870018699	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391168	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.22	chr14	-	3449	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	146	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	49.9135252211262	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391114	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380494_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.23	chr14	-	4594	19	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	113	-9	intron_retention	FALSE	canonical	0	0	junction_7	40.4815534884657	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391147	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.24	chr14	-	4166	10	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	-2788	-9	intron_retention	FALSE	canonical	0	0	junction_7	54.2069650665705	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70381333	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70380962_70381036
ES.11082.25	chr14	-	3669	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	99	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.7763724580636	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391161	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376449_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.26	chr14	-	4454	19	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	134	-9	intron_retention	FALSE	canonical	0	0	junction_5	61.3685486664961	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391126	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377577_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70379981_70380494_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389914_70390112_70390207_70391075
ES.11082.27	chr14	-	3948	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	333	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.6865613353283	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70390927	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70390510
ES.11082.28	chr14	-	3595	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	105	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.9200108012557	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391155	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376634_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.29	chr14	-	3097	9	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	-1925	-9	intron_retention	FALSE	canonical	0	0	junction_6	69.895345875101	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70380470	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377583_70377913_70377994_70378316_70379297_70379391_70379620_70379808_70379981_70380373
ES.11082.3	chr14	-	3832	20	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	115	0	intron_retention	FALSE	canonical	0	0	junction_7	39.2359154820161	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391145	70375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.30	chr14	-	3462	20	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	90	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	52.3541107133648	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCAAGTGTGAG	NA	False	NA	35	True	AATAAA	-9	NA	70391170	70375625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.32	chr14	-	3125	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	90	510	90	-510	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCATTTTGCCCTCA	NA	False	NA	NA	False	AATACA	-18	NA	70391170	70376126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.33	chr14	-	203	1	Intergenic	novelGene_9250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGGAACACTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	70385897	70385694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70385700_70385900
ES.11082.6	chr14	-	6306	15	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	119	0	intron_retention	TRUE	canonical	0	0	junction_6	44.9578600877919	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391141	70375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377997_70378316_70379297_70379391_70379620_70379808_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821
ES.11082.7	chr14	-	3690	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.9444795831698	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391159	70375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388624_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11082.9	chr14	-	3597	21	NNC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.3652658088886	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391159	70375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70376397_70376618_70376825_70376940_70377103_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ES.11083.1	chr14	-	2122	6	NIC	ENSMUSG00000044551.14	novel	1986	7	NA	NA	67	-1	intron_retention	FALSE	canonical	2	3	junction_1	2.87054001888146	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGACTGTTAAATGAC	NA	False	NA	NA	False	NA	NA	NA	70396884	70391854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70392726_70393298_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
ES.11084.1	chr14	+	176	1	Intergenic	novelGene_9251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70406377	70406553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70406400_70406600
ES.11085.1	chr14	-	1108	6	NNC	ENSMUSG00000022090.11	novel	1523	10	NA	NA	1307	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.09544511501033	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAGTAGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	70408128	70401687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70407046_70407230_70408084
ES.11086.1	chr14	+	202	1	Intergenic	novelGene_9252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCAGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	70409645	70409847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70409600_70409800
ES.11087.1	chr14	+	220	1	Intergenic	novelGene_9253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGCACAGAACCTCC	NA	False	NA	NA	False	AAGAAA	-9	NA	70427588	70427808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70427600_70427800
ES.11088.1	chr14	-	1891	10	NNC	ENSMUSG00000022091.7	novel	3061	21	NA	NA	12658	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.37027731190089	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTGCTTCATT	-22	False	NA	NA	False	AATAAA	-15	NA	70429414	70417917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429287
ES.11088.4	chr14	-	3101	21	NNC	ENSMUSG00000022091.7	novel	3061	21	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.2927158709448	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTGCTTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	70443541	70417917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70418681_70421114_70421222_70421455_70421555_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534_70429597_70430055_70430143_70430854_70430909_70431009_70431097_70431309_70431401_70432861_70432929_70433371_70433411_70436730_70436795_70438797_70438992_70440379_70440498_70440720_70440866_70443210
ES.11088.6	chr14	-	2775	6	NIC	ENSMUSG00000022091.7	novel	3061	21	NA	NA	12380	-2	intron_retention	FALSE	canonical	0	0	junction_4	8.93084542470644	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCCTGTCTGCTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	70429692	70417918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70418681_70421114_70422586_70424307_70424434_70428176_70428292_70428881_70429025_70429534
ES.11088.7	chr14	-	2626	9	NNC	ENSMUSG00000022091.7	novel	3061	21	NA	NA	12642	-2	intron_retention	FALSE	canonical	1	1	junction_8	7.806247497998	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCCTGTCTGCTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	70429430	70417918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70418681_70421114_70421222_70421455_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429287
ES.11089.1	chr14	-	2800	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	26	-856	5	823	multi-exon	TRUE	canonical	2	11	junction_1	4.03827838412513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATAATAATCCTGAG	9212	False	NA	NA	False	AATAAA	-24	NA	70526894	70454490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ES.11089.2	chr14	-	2033	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	-31	-32	-31	-1	multi-exon	FALSE	canonical	2	11	junction_1	4.03827838412513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTTGTCCTAATTTT	9155	False	NA	NA	False	NA	NA	NA	70526951	70455314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ES.11089.3	chr14	-	2395	13	FSM	ENSMUSG00000022092.12	ENSMUST00000228265.2	2494	13	-43	142	-22	-142	multi-exon	FALSE	canonical	2	5	junction_1	4.93006648591635	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGGAAGATAGGTAGG	9164	False	NA	NA	False	AATAAA	-14	NA	70526942	70460567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70461381_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ES.11089.4	chr14	-	1228	8	ISM	ENSMUSG00000022092.12	ENSMUST00000228265.2	2494	13	-52	17740	-31	-17740	5prime_fragment	FALSE	canonical	2	12	junction_1	4.29047354790892	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATATCTTAGTGTGAAT	9155	False	NA	NA	False	AATAAA	-14	NA	70526951	70478165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ES.11089.5	chr14	-	2972	1	NIC	ENSMUSG00000022092.12	novel	1970	14	NA	NA	1	-63522	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAGGAAAGCAGAGC	9187	False	NA	NA	False	NA	NA	NA	70526919	70523947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70523900_70526900
ES.1109.1	chr1	+	160	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	100311831	100311991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_100311800_100312000
ES.11090.1	chr14	-	4821	10	NNC	ENSMUSG00000022094.16	novel	4926	10	NA	NA	-372	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	3.80058475033046	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCAAGTGTCGGCTTGCT	NA	False	NA	9	True	AATAAA	-22	NA	70572019	70540908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70568717_70568816_70571987
ES.11090.2	chr14	-	4927	10	FSM	ENSMUSG00000022094.16	ENSMUST00000068044.14	4926	10	1	-2	1	2	multi-exon	FALSE	canonical	2	7	junction_9	2.18298696715428	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAGTCCCAAGTGTCG	NA	False	NA	2	True	AATAAA	-15	NA	70588873	70540915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70568717_70568816_70588728
ES.11090.3	chr14	-	4233	6	NIC	ENSMUSG00000022094.16	novel	4926	10	NA	NA	-2697	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	4.4988887516808	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAGTCCCAAGTGTCG	NA	False	NA	2	True	AATAAA	-15	NA	70554071	70540915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70553886
ES.11090.4	chr14	-	4882	10	FSM	ENSMUSG00000022094.16	ENSMUST00000022688.10	2098	10	44	-2828	13	0	multi-exon	TRUE	canonical	1	1	junction_5	4.44999653211129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGAGTCCCAAGTGT	NA	False	NA	0	True	AATAAA	-13	NA	70588830	70540917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70553112_70553283_70553886_70554074_70556110_70556390_70568717_70568816_70588728
ES.11090.5	chr14	-	4832	9	NIC	ENSMUSG00000022094.16	novel	4926	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGAGTCCCAAGTG	NA	False	NA	-1	True	AATAAA	-12	NA	70588879	70540918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70588728
ES.11091.1	chr14	+	2848	7	NNC	ENSMUSG00000003469.10	novel	2838	5	NA	NA	-14238	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.54405625374562	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCTCCGTCTGTCTTGG	NA	False	NA	1	True	AATAAA	-13	NA	70680677	70706260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70680846_70692310_70692410_70694414_70694498_70699178_70699364_70700679_70700855_70702889_70703008_70704240
ES.11091.2	chr14	+	2618	5	NNC	ENSMUSG00000003469.10	novel	2838	5	NA	NA	-14186	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.6393596310755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCTGTCTTGGTCCA	NA	False	NA	5	True	AATAAA	-17	NA	70680729	70706264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70680846_70699178_70699364_70700679_70700855_70702889_70703008_70704240
ES.11091.3	chr14	+	2849	5	FSM	ENSMUSG00000003469.10	ENSMUST00000003561.10	2838	5	-21	10	-21	-10	multi-exon	FALSE	canonical	1	1	junction_1	2.17944947177034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCCGTCTGTCTTGGTC	NA	False	NA	3	True	AATAAA	-15	NA	70694894	70706262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70695244_70699178_70699364_70700679_70700855_70702889_70703008_70704240
ES.11092.1	chr14	-	6345	22	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-22	1611	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	16.3899476963024	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTGTGTAGCTCTGG	NA	False	NA	NA	False	NA	NA	NA	70666854	70608314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.10	chr14	-	5427	23	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	16.0948248959022	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTGTCTGAGAGAATAT	NA	False	NA	-15	True	AATAAA	-17	NA	70666888	70609926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628443_70628643_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.11	chr14	-	2564	4	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	47838	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.7672653471886	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTGTCTGAGAGAATAT	8779	False	NA	-15	True	AATAAA	-17	NA	70618675	70609926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613387_70613496_70614111_70614366_70618432
ES.11092.13	chr14	-	4817	23	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.333022849095	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTGTCTGAGAGAAT	NA	False	NA	-17	True	AATAAA	-15	NA	70666852	70609928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613406_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646828_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.14	chr14	-	4294	17	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	8361	-3	intron_retention	FALSE	canonical	0	0	junction_5	16.7349512622535	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGTGTCTGAGAGAAT	1653	False	NA	-17	True	AATAAA	-15	NA	70658152	70609928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628841_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646835_70647830_70647956_70648582_70648701_70658088
ES.11092.15	chr14	-	4756	22	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-42	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.6256638487821	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGTGTCTGAGAGAA	NA	False	NA	-18	True	AATAAA	-14	NA	70666874	70609929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.16	chr14	-	4535	22	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.627982316516	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGTGTCTGAGAGAA	NA	False	NA	-18	True	AATAAA	-14	NA	70666826	70609929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613387_70613496_70627367_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.17	chr14	-	4694	22	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.4805939615131	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGTGTCTGAGAGAA	NA	False	NA	-18	True	AATAAA	-14	NA	70666845	70609929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.18	chr14	-	4644	23	NNC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-45	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	16.1856481677927	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTCTTAAGTTCCACTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	70666877	70610146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648695_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.19	chr14	-	3084	21	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-43	-3903	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	10.4661358676448	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCCAGAGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	70666875	70613828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.20	chr14	-	173	1	Intergenic	novelGene_9254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	7320	False	NA	NA	False	NA	NA	NA	70628637	70628464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70628500_70628600
ES.11092.21	chr14	-	2608	16	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-15	17626	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	10.7049313662235	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACATTTACAAGTAATG	NA	False	NA	NA	False	AATAAA	-26	NA	70666847	70630956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.22	chr14	-	1440	7	FSM	ENSMUSG00000033644.6	ENSMUST00000226229.2	962	7	-49	-429	-49	429	multi-exon	FALSE	canonical	3	61	junction_5	6.67499479816693	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	70666881	70648153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.23	chr14	-	1967	9	NNC	ENSMUSG00000000776.14	novel	2032	8	NA	NA	79	25143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.8585289736958	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTAGGGCAGGTTCAA	1967	False	NA	NA	False	NA	NA	NA	70680651	70651053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70651073_70676240_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ES.11092.24	chr14	-	1909	5	ISM	ENSMUSG00000033644.6	ENSMUST00000226229.2	962	7	2637	8382	2318	6993	internal_fragment	FALSE	canonical	3	61	junction_4	7.72576857018122	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTGCATTTTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	70664195	70656964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955
ES.11092.25	chr14	-	2106	5	NIC	ENSMUSG00000033644.6	novel	962	7	NA	NA	-15	6988	intron_retention	FALSE	canonical	3	61	junction_3	7.72576857018122	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAACCTGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	70666847	70656969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70658200_70658897_70659105_70660076_70660432_70663955_70664193_70666770
ES.11092.26	chr14	-	3224	1	FSM	ENSMUSG00000088717.4	ENSMUST00000158092.4	110	1	-464	-2650	-464	2650	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAACCTGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	70660193	70656969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70657000_70660200
ES.11092.27	chr14	-	4399	4	NIC	ENSMUSG00000033644.6	novel	962	7	NA	NA	-24	6983	intron_retention	FALSE	canonical	3	61	junction_3	8.73053390247253	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAACCTGCA	NA	False	NA	NA	False	NA	NA	NA	70666567	70656974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70658200_70658897_70659105_70660076_70660432_70663955
ES.11092.28	chr14	-	1293	6	ISM	ENSMUSG00000033644.6	ENSMUST00000226229.2	962	7	-13	9070	-13	6305	5prime_fragment	FALSE	canonical	3	61	junction_4	6.99714227381436	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATAACTCAGAATCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	70666845	70657652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.3	chr14	-	5049	22	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-41	290	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.6256638487821	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGATTGATTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	70666873	70609635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.30	chr14	-	2052	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	-29	-7	-29	7	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTCTGCTCACATCC	1702	False	NA	0	True	AATAAA	-24	NA	70680916	70676189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ES.11092.31	chr14	-	2175	8	NIC	ENSMUSG00000000776.14	novel	2016	9	NA	NA	-14	3	intron_retention	FALSE	canonical	3	137	junction_3	17.1951583123784	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGGTTCTGCTCAC	1717	False	NA	-4	True	AATAAA	-20	NA	70680901	70676193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678896_70679791_70679836_70680390_70680561_70680772
ES.11092.32	chr14	-	2347	8	NIC	ENSMUSG00000000776.14	novel	2016	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	150	junction_7	12.5519329351365	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTAAGTGGTTCTGCT	1719	False	NA	-7	True	AATAAA	-17	NA	70680899	70676196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70677019_70677157_70677311_70677453_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ES.11092.33	chr14	-	2303	7	NIC	ENSMUSG00000000776.14	novel	2016	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	137	junction_2	16.4460397124117	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTAAGTGGTTCTGCT	1729	False	NA	-7	True	AATAAA	-17	NA	70680889	70676196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70677019_70677157_70677720_70678038_70678208_70678476_70678896_70679791_70679836_70680390_70680561_70680772
ES.11092.34	chr14	-	2576	5	NIC	ENSMUSG00000000776.14	novel	2032	8	NA	NA	95	-1	intron_retention	FALSE	canonical	3	161	junction_2	4.32290411644765	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGTAAGTGGTTCTGC	1983	False	NA	-8	True	AATAAA	-16	NA	70680635	70676197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ES.11092.35	chr14	-	2450	7	NIC	ENSMUSG00000000776.14	novel	2016	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	150	junction_6	11.5385826204473	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTCTATTTCCAAAT	1720	False	NA	-10	True	AATAAA	-17	NA	70680898	70676235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70677019_70677157_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ES.11092.37	chr14	-	3958	4	NIC	ENSMUSG00000000776.14	novel	2016	9	NA	NA	45	-2	intron_retention	FALSE	canonical	3	150	junction_3	15.542057635833	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGAGTCTATTTCCAA	1803	False	NA	-12	True	AATAAA	-15	NA	70680815	70676237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70677019_70677157_70678208_70678476_70680561_70680772
ES.11092.4	chr14	-	5224	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	-19	-289	-19	289	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGATTGATTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	70666562	70609636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
ES.11092.5	chr14	-	5000	22	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	3	288	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	16.1537398350226	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTGATTGATTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	70666829	70609637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.8	chr14	-	4885	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	-58	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTGAGAGAATATTG	NA	False	NA	-13	True	AATAAA	-19	NA	70666890	70609924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
ES.11092.9	chr14	-	4972	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	-56	0	-56	0	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666599	70609925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
ES.11093.1	chr14	-	158	1	Intergenic	novelGene_9255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	70684704	70684546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70684500_70684700
ES.11094.1	chr14	-	3932	20	FSM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	-248	0	-202	0	multi-exon	FALSE	canonical	1	1	junction_3	1.84885979686845	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	8745	False	NA	NA	False	AATAAA	-20	NA	70757876	70711997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70712690_70715292_70715544_70716984_70717199_70717593_70717722_70723586_70723713_70727459_70727641_70727986_70728148_70728790_70728917_70729515_70729712_70729844_70729991_70730218_70730336_70732152_70732256_70742121_70742238_70742771_70742897_70744892_70744999_70745438_70745618_70745895_70746014_70746189_70746355_70749020_70749135_70757308
ES.11095.1	chr14	+	3156	8	FSM	ENSMUSG00000033595.8	ENSMUST00000047331.8	3174	8	17	1	17	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.989743318610787	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCAGGTGTCCTCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	70768284	70775763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70768711_70769507_70769580_70770214_70770287_70770616_70770689_70770784_70770857_70771808_70771979_70772120_70772286_70773656
ES.11096.1	chr14	+	1693	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	-128	0	-25	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6439	False	NA	30	True	AATAAA	-26	NA	70782665	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11096.11	chr14	+	1468	6	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	167	0	intron_retention	FALSE	canonical	3	225	junction_2	43.2462715155885	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	7561	False	NA	30	True	AATAAA	-26	NA	70783787	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70783990_70784369_70784447_70784554_70784676_70785106_70785516_70785624_70785780_70785869
ES.11096.2	chr14	+	3113	4	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	251	junction_1	37.5854581808798	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6455	False	NA	30	True	AATAAA	-26	NA	70782681	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70783990_70784369_70785516_70785624_70785780_70785869
ES.11096.3	chr14	+	1278	8	NNC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.254398429211	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCTCCTAATTTGT	6458	False	NA	17	True	AATAAA	-13	NA	70782684	70786360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70782796_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11096.4	chr14	+	1775	7	FSM	ENSMUSG00000033589.5	ENSMUST00000226563.2	1444	7	1	-332	1	0	multi-exon	FALSE	canonical	3	251	junction_2	32.9313258497471	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6465	False	NA	30	True	AATAAA	-26	NA	70782691	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70783179_70783916_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11096.5	chr14	+	2992	4	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	43	0	intron_retention	FALSE	canonical	3	251	junction_1	34.7658836600865	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6507	False	NA	30	True	AATAAA	-26	NA	70782733	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70783990_70784369_70785221_70785379_70785516_70785624
ES.11096.6	chr14	+	2837	5	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-46	0	intron_retention	FALSE	canonical	3	261	junction_1	31.5475831086947	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6521	False	NA	30	True	AATAAA	-26	NA	70782747	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11096.8	chr14	+	1679	8	NNC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.254398429211	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6528	False	NA	30	True	AATAAA	-26	NA	70782754	70786373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_70783179_70783841_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11096.9	chr14	+	2435	6	NIC	ENSMUSG00000033589.5	novel	1565	8	NA	NA	-39	-15	intron_retention	FALSE	canonical	3	251	junction_1	34.2426634478102	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTCTCCTAATTT	6528	False	NA	15	True	AATAAA	-11	NA	70782754	70786358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ES.11097.1	chr14	+	5729	19	FSM	ENSMUSG00000022096.15	ENSMUST00000161069.8	5607	19	526	-648	157	0	multi-exon	FALSE	canonical	0	0	junction_1	6.15539510420646	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTCCGAGCATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	70791652	70810988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70792548_70793787_70794441_70795068_70795850_70797078_70797230_70797312_70797504_70799251_70799417_70800768_70800859_70801006_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
ES.11097.3	chr14	+	2888	12	ISM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	7580	-2	7580	2	3prime_fragment	FALSE	canonical	2	7	junction_11	3.66804381851491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGTTCCGAGCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	70800919	70810986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
ES.11097.4	chr14	+	5238	9	NIC	ENSMUSG00000022096.15	novel	5278	18	NA	NA	7611	2	intron_retention	FALSE	canonical	2	7	junction_8	3.56852560590505	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGTTCCGAGCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	70800950	70810986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
ES.11098.1	chr14	+	1490	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	144	2292	-66	-2	multi-exon	FALSE	canonical	3	39	junction_1	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCCTGCTTGCCTAAA	NA	False	NA	NA	False	AGTAAA	-13	NA	70815220	70817719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70815551_70816351_70816566_70816773
ES.11098.2	chr14	+	1026	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	217	2683	7	-393	multi-exon	FALSE	canonical	3	39	junction_1	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACTCCAGGAATCTTCT	NA	False	NA	NA	False	NA	NA	NA	70815293	70817328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70815551_70816351_70816566_70816773
ES.11098.3	chr14	+	2742	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	218	966	8	-966	multi-exon	FALSE	canonical	3	39	junction_1	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGAGTGCTGTGGGT	NA	False	NA	NA	False	AATGAA	-15	NA	70815294	70819045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_70815551_70816351_70816566_70816773
ES.11099.1	chr14	-	4521	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-18	6	intron_retention	TRUE	non_canonical	0	0	junction_1	23.953079134007	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTCCCCAGTCTGCTT	NA	False	NA	-1	True	AATAAA	-23	NA	70837293	70820729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821106_70821230_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827875_70829014_70829188_70831408_70831488_70837181
ES.11099.10	chr14	-	3787	19	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-22	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8365096466055	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837297	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821214_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826452_70826545_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.11	chr14	-	3793	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-13	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8511052332403	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837288	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829091_70829188_70831408_70831488_70837181
ES.11099.12	chr14	-	3875	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837294	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.13	chr14	-	3894	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	5	0	intron_retention	TRUE	non_canonical	0	0	junction_1	23.4146555334474	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837270	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821218_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829091_70829188_70831408_70831488_70837181
ES.11099.16	chr14	-	4032	16	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_1	19.7371617907833	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837258	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821240_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.18	chr14	-	4900	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	0	intron_retention	TRUE	non_canonical	0	0	junction_1	19.4293592277254	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837264	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821112_70821240_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.19	chr14	-	4008	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	15	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.1595888199617	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837260	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821113_70821244_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.20	chr14	-	4444	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.3067345763078	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837264	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.21	chr14	-	3881	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.4088085629983	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837264	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821110_70821240_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827875_70829014_70829188_70831408_70831488_70837181
ES.11099.23	chr14	-	3840	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.4088085629983	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837220	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821099_70821226_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827875_70829014_70829188_70831408_70831488_70837181
ES.11099.26	chr14	-	3862	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	False	NA	-7	True	AATAAA	-17	NA	70837278	70820735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821232_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.28	chr14	-	3749	19	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	15	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8365096466055	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837260	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821057_70821230_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826452_70826545_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.3	chr14	-	4049	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-20	2	intron_retention	TRUE	non_canonical	0	0	junction_1	19.1595888199617	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGACTCTCCCCAGTCT	NA	False	NA	-5	True	AATAAA	-19	NA	70837295	70820733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821099_70821226_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.30	chr14	-	3927	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837295	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821126_70821250_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.31	chr14	-	3183	6	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	12440	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	30.2364019023428	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70824835	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245
ES.11099.32	chr14	-	3828	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-41	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	27.2694884440468	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837316	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821113_70821244_70822624_70822778_70822880_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826452_70826545_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.33	chr14	-	3734	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.7617569583985	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837246	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821099_70821226_70822624_70822778_70822880_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.34	chr14	-	4010	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-33	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	19.1595888199617	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837308	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.36	chr14	-	3897	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTGACTCTCCCCAG	NA	False	NA	-8	True	AATAAA	-16	NA	70837315	70820736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821214_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.38	chr14	-	4123	19	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1742145282879	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCTGACTCTCCCCA	NA	False	NA	-9	True	AATAAA	-15	NA	70837295	70820737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70830504_70830754_70831408_70831488_70837181
ES.11099.39	chr14	-	3973	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_1	23.9992675669488	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCTGACTCTCCCCA	NA	False	NA	-9	True	AATAAA	-15	NA	70837287	70820737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821240_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827875_70829014_70829188_70831408_70831488_70837181
ES.11099.4	chr14	-	3922	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-19	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGACTCTCCCCAGTCT	NA	False	NA	-5	True	AATAAA	-19	NA	70837294	70820733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821113_70821244_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.43	chr14	-	3696	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.7617569583985	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70837259	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.44	chr14	-	3226	13	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	10772	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.6914921877987	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70826503	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821037_70821208_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315
ES.11099.45	chr14	-	4083	19	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1742145282879	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70837264	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821060_70821244_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70830504_70830754_70831408_70831488_70837181
ES.11099.46	chr14	-	5033	15	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_1	25.4373981470157	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70837264	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821232_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826194_70826240_70826315_70826562_70827568_70829188_70831408_70831488_70837181
ES.11099.47	chr14	-	4099	16	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	6	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	19.6185852927495	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70837269	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821114_70821248_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.48	chr14	-	4498	14	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	26.0232031193648	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATGCTGACTCTCCCC	NA	False	NA	-10	True	AATAAA	-14	NA	70837264	70820738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821040_70821216_70822624_70822778_70822880_70823514_70823659_70823796_70824139_70824245_70825181_70825401_70825479_70825701_70825811_70826042_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.49	chr14	-	3999	17	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-37	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	19.3946472963547	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGTGATTGTGTGGA	NA	False	NA	-26	True	NA	NA	NA	70837312	70820754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821099_70821226_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.5	chr14	-	4061	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-154	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGACTCTCCCCAGTCT	NA	False	NA	-5	True	AATAAA	-19	NA	70837429	70820733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821099_70821226_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.6	chr14	-	4127	19	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1742145282879	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837251	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821113_70821244_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70830504_70830754_70831408_70831488_70837181
ES.11099.7	chr14	-	3876	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837299	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821240_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.8	chr14	-	3890	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837260	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821108_70821236_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.11099.9	chr14	-	3835	18	NNC	ENSMUSG00000022095.10	novel	4033	17	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8496142792766	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGACTCTCCCCAGTC	NA	False	NA	-6	True	AATAAA	-18	NA	70837264	70820734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70821059_70821246_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ES.111.1	chr1	+	1782	2	Genic_Genomic	ENSMUSG00000069620.7	novel	321	1	NA	NA	-5767	182	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	13126481	13132751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_13126671_13131158
ES.1110.1	chr1	+	152	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	8160	False	NA	NA	False	NA	NA	NA	101616554	101616706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_101616600_101616700
ES.11100.1	chr14	+	2406	11	Antisense	novelGene_ENSMUSG00000022099.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70841606	70855158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_70842297_70842409_70842988_70843131_70843178_70843326_70843399_70850107_70850216_70850737_70850861_70852282_70852436_70852673_70852734_70853056_70853152_70853511_70853561_70854726
ES.11101.1	chr14	+	2596	1	Antisense	novelGene_ENSMUSG00000022099.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70865537	70868133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_70865500_70868100
ES.11102.1	chr14	+	2065	1	Antisense	novelGene_ENSMUSG00000022099.18_AS_novelGene_ENSMUSG00000022101.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGCAGTTCTTAGGGA	NA	False	NA	NA	False	NA	NA	NA	70873295	70875360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_70873300_70875400
ES.11103.1	chr14	-	2766	2	ISM	ENSMUSG00000022099.18	ENSMUST00000228001.2	2437	13	13554	-1557	12401	72	3prime_fragment	FALSE	canonical	3	214	junction_1	0	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGGCTTCATAAAACCA	NA	False	NA	NA	False	NA	NA	NA	70842431	70839552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_70842295_70842407
ES.11103.11	chr14	-	2746	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.7670042417792	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70873633	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
ES.11103.13	chr14	-	2519	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.7771494535236	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70866442	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70866359
ES.11103.17	chr14	-	2677	16	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.4179901256301	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70873370	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178_70864309_70873259
ES.11103.18	chr14	-	2466	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	743	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.6606189961783	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70872675	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70872581
ES.11103.2	chr14	-	3167	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-2	427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGGATCTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	70864496	70840635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.20	chr14	-	2807	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.2585476433873	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864492	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852788_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.21	chr14	-	2514	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.0381820064992	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70873337	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
ES.11103.22	chr14	-	2739	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.2955904982194	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATCTATTGTTTCTATC	NA	False	NA	-5	True	ATTAAA	-17	NA	70864491	70841114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850859_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.24	chr14	-	3057	16	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.9962962083599	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATCTATTGTTTCTATC	NA	False	NA	-5	True	ATTAAA	-17	NA	70864531	70841114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70853665_70853936_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.25	chr14	-	2660	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	89	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.4984565054474	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAATCTATTGTTTCTA	NA	False	NA	-7	True	ATTAAA	-15	NA	70864405	70841116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843125_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.27	chr14	-	2617	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	211	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.6606189961783	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAATCTATTGTTTCT	NA	False	NA	-8	True	ATTAAA	-14	NA	70864283	70841117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855994_70864178
ES.11103.29	chr14	-	2962	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	211	-7	intron_retention	FALSE	canonical	2	74	junction_2	38.011209807186	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCTAAATCTATTGTTT	NA	False	NA	-10	True	ATTAAA	-12	NA	70864283	70841119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70842295_70842407_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.31	chr14	-	3944	14	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	-34	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	61.4499363267059	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCCTAAATCTATTGTT	NA	False	NA	-11	True	ATTAAA	-11	NA	70864528	70841120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.32	chr14	-	2469	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	-142	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.4856357853925	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCCCTAAATCTATTG	NA	False	NA	-13	True	ATTAAA	-9	NA	70873630	70841122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842496_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873522
ES.11103.33	chr14	-	2442	15	NNC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	45	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.0381820064992	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGGTTTCGTTTTTA	NA	False	NA	-19	True	NA	NA	NA	70873373	70841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70842736_70842809_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
ES.11103.34	chr14	-	2390	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	181	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCCCAGGTCTGGGTT	NA	False	NA	-28	True	NA	NA	NA	70864313	70841229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.35	chr14	-	2368	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	45	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.7670042417792	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCCAGGTCTGGGT	NA	False	NA	-29	True	NA	NA	NA	70873373	70841230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
ES.11103.36	chr14	-	2462	13	NNC	ENSMUSG00000022099.18	novel	2377	14	NA	NA	-203	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.2787738062147	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCCAGGTCTGGGT	NA	False	NA	-29	True	NA	NA	NA	70866642	70841230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70866359
ES.11103.37	chr14	-	1653	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	164	-871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGTCACGAGGCGTGGA	NA	False	NA	NA	False	NA	NA	NA	70864330	70841983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.4	chr14	-	2829	14	NNC	ENSMUSG00000022099.18	novel	2643	16	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864632	70841109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.5	chr14	-	2744	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.6901001518264	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTTTCTATCCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	70864492	70841111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852788_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.6	chr14	-	2512	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.765773443168	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864318	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842489_70843124_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ES.11103.7	chr14	-	2442	13	NNC	ENSMUSG00000022099.18	novel	2377	14	NA	NA	171	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.8671614083156	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70864323	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70864178
ES.11103.8	chr14	-	2382	13	NNC	ENSMUSG00000022099.18	novel	2377	14	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.6079295575293	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70873344	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70873259
ES.11103.9	chr14	-	2470	14	NNC	ENSMUSG00000022099.18	novel	2377	14	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.7914899612117	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70866457	70841112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70842295_70842407_70842497_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70866359
ES.11104.2	chr14	-	4289	4	NIC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-48	0	intron_retention	FALSE	canonical	3	49	junction_3	6.37704215656966	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879756	70873642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70874464_70875906_70876014_70876241_70879009_70879162
ES.11104.4	chr14	-	1386	6	NNC	ENSMUSG00000022101.7	novel	1336	5	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	21.2377023239333	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGGGTCCGCTGAAGAAA	NA	False	NA	-2	True	AATAAA	-14	NA	70879676	70873644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162_70879349_70879584
ES.11104.5	chr14	-	1483	6	NNC	ENSMUSG00000022101.7	novel	1689	5	NA	NA	-114	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	18.6826122370508	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGGGTCCGCTGAAGAAA	NA	False	NA	-2	True	AATAAA	-14	NA	70879822	70873644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162_70879267_70879584
ES.11104.6	chr14	-	2991	4	NIC	ENSMUSG00000022101.7	novel	1336	5	NA	NA	91	-3	intron_retention	FALSE	canonical	3	35	junction_2	11.4309521329882	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCGGGTCCGCTGAAGAA	NA	False	NA	-3	True	AATAAA	-13	NA	70879603	70873645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70876014_70876241_70876387_70878971_70879009_70879162
ES.11105.1	chr14	-	1043	9	FSM	ENSMUSG00000047911.7	ENSMUST00000062629.5	997	9	-46	0	-46	0	multi-exon	FALSE	canonical	1	3	junction_7	2.75850956133924	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCCCTCTGCCTCCCCC	NA	False	NA	NA	False	AATAAA	-15	NA	70890570	70884741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_70884990_70885076_70885111_70885484_70885526_70885699_70885852_70886910_70887005_70889562_70889677_70889768_70889855_70889971_70890136_70890460
ES.11106.1	chr14	+	3999	1	Antisense	novelGene_ENSMUSG00000022100.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCTTTATTTGTGCCA	NA	False	NA	NA	False	NA	NA	NA	70903131	70907130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_70903100_70907100
ES.11107.1	chr14	+	178	1	Intergenic	novelGene_9256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	70913520	70913698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70913500_70913700
ES.11108.1	chr14	+	231	1	Intergenic	novelGene_9259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTACAGCTGTCTAGGAAC	NA	False	NA	NA	False	AATATA	-25	NA	70998284	70998515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_70998300_70998500
ES.11109.1	chr14	+	2002	7	NNC	ENSMUSG00000022102.14	novel	404	3	NA	NA	25	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.92498812913071	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTGTGGCCTGTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	71003513	71015933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_71003553_71008984_71009188_71010743_71010805_71012905_71013188_71013293_71013512_71014255_71014438_71014916
ES.11109.2	chr14	+	5351	4	NIC	ENSMUSG00000022102.14	novel	1795	5	NA	NA	-1571	-3	intron_retention	FALSE	canonical	1	3	junction_1	2.05480466765633	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTCTGTGGCCTGTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	71009140	71015932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_71013188_71013423_71013512_71014255_71014438_71014898
ES.11109.3	chr14	+	1441	4	NNC	ENSMUSG00000022102.14	novel	247	2	NA	NA	-69	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.55902608401044	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTGTGGCCTGTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	71010642	71015933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_71010805_71013423_71013512_71014255_71014438_71014924
ES.1111.1	chr1	+	205	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAAAATTCTAGGTAGG	NA	False	NA	NA	False	NA	NA	NA	102020974	102021179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_102021000_102021200
ES.11110.1	chr14	-	7243	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	6	2703	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	585	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGATTTTACTCAG	NA	False	NA	NA	False	AATAAA	-30	NA	71004062	70899554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.10	chr14	-	4759	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	88.9139008020113	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTCAGCAGTCACGTG	NA	False	NA	-11	True	AATAAA	-21	NA	71004066	70901974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71004019
ES.11110.11	chr14	-	4453	24	NIC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	7	283	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_8	93.4393245502169	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTCAGCAGTCACGTG	NA	False	NA	-11	True	AATAAA	-21	NA	71004061	70901974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.15	chr14	-	4724	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-32	282	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_14	133.313980076924	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTCAGCAGTCACGT	NA	False	NA	-12	True	AATAAA	-20	NA	71004026	70901975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70921337_70921449_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.16	chr14	-	4781	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	282	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_10	88.4685896690158	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTCAGCAGTCACGT	NA	False	NA	-12	True	AATAAA	-20	NA	71004066	70901975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918741_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.17	chr14	-	4742	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	13	282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	88.8509332544799	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTCAGCAGTCACGT	NA	False	NA	-12	True	AATAAA	-20	NA	71003977	70901975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920291_70921084_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.19	chr14	-	4812	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-31	282	at_least_one_novel_splicesite	FALSE	non_canonical	2	15	junction_23	86.3685439105528	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTCAGCAGTCACGT	NA	False	NA	-12	True	AATAAA	-20	NA	71004025	70901975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939132_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.21	chr14	-	4967	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	23	282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	88.2795783328018	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTCAGCAGTCACGT	NA	False	NA	-12	True	AATAAA	-20	NA	71004045	70901975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939388_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.23	chr14	-	4728	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	3	281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	117.899490842108	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004065	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919880_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70944726_70944874_71003951
ES.11110.26	chr14	-	4798	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	23	281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	88.6034924547078	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004045	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922992_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.27	chr14	-	6717	26	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	281	intron_retention	FALSE	non_canonical	3	332	junction_17	44.6532238477806	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004066	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70906199_70906756_70906918_70907990_70908130_70908491_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.29	chr14	-	5734	26	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-31	281	intron_retention	FALSE	non_canonical	1	5	junction_16	88.764263079237	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004025	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.3	chr14	-	5153	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-312	295	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGTGTAGTGTGTTCAG	NA	False	NA	1	True	AATAAA	-33	NA	71004380	70901962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.30	chr14	-	5789	28	NNC	ENSMUSG00000022100.15	novel	15121	28	NA	NA	0	281	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_13	88.1366783698709	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004068	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70921337_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.32	chr14	-	5166	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	23	281	intron_retention	FALSE	non_canonical	3	332	junction_18	43.8549248986909	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTCAGCAGTCACG	NA	False	NA	-13	True	AATAAA	-19	NA	71004045	70901976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.35	chr14	-	4893	29	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-35	280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	150.239298916014	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTTTCAGCAGTCAC	NA	False	NA	-14	True	AATAAA	-18	NA	71004029	70901977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920288_70921095_70921177_70921337_70921449_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944722_70944874_71003951
ES.11110.38	chr14	-	4713	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	16	279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	133.621150260661	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004052	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70929016_70929091_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936490_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.4	chr14	-	4738	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	5	291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116.097352838369	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCACGTGTAGTGTGT	NA	False	NA	-3	True	AATAAA	-29	NA	71003985	70901966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906114_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921096_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.40	chr14	-	5638	25	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	3324	279	intron_retention	FALSE	non_canonical	3	332	junction_18	44.1611435225835	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	70942151	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103
ES.11110.41	chr14	-	4653	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-1	279	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_17	87.2556266305974	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004069	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.43	chr14	-	4698	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	8	279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	88.1918044871417	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004060	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914239_70918692_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.45	chr14	-	5694	27	NNC	ENSMUSG00000022100.15	novel	3663	27	NA	NA	-16	279	intron_retention	FALSE	non_canonical	3	332	junction_18	43.2188766834025	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004010	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.48	chr14	-	4673	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	5	279	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_26	90.1018572203493	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004063	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_71003951
ES.11110.49	chr14	-	4824	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-1	279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	88.8920987074781	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTTTCAGCAGTCA	NA	False	NA	-15	True	AATAAA	-17	NA	71004069	70901978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919876_70920228_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.52	chr14	-	4709	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-5	158	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCGACTGTGTGGT	NA	False	NA	-136	True	NA	NA	NA	71004073	70902099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.53	chr14	-	4566	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	1	21	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGCCTTGTACTTTCC	NA	False	NA	NA	False	ATTAAA	-42	NA	71004067	70902236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.55	chr14	-	4474	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_26	88.5828682883085	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGAACATTGGATGG	NA	False	NA	NA	False	AATAAA	-44	NA	71003991	70902262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944716_70944874_71003951
ES.11110.57	chr14	-	5673	26	NIC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	22	11	intron_retention	FALSE	canonical	3	332	junction_17	44.7198568870698	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACCTACAGAGGAACAT	NA	False	NA	NA	False	AATAAA	-37	NA	71004046	70902269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.59	chr14	-	5658	27	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-1	11	intron_retention	FALSE	non_canonical	3	332	junction_18	42.7148242770323	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACCTACAGAGGAACAT	NA	False	NA	NA	False	AATAAA	-37	NA	71004069	70902269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.6	chr14	-	4921	29	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	23	287	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_14	113.699702941475	584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCAGTCACGTGTAGT	NA	False	NA	-7	True	AATAAA	-25	NA	71004045	70901970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70921337_70921449_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.61	chr14	-	4311	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-15	-153	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCTGCACTCATGAATG	NA	False	NA	NA	False	NA	NA	NA	71004009	70902433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.62	chr14	-	4134	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	-3	-315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	88.7987660414271	579	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTTGGTCTCTATAGG	NA	False	NA	NA	False	ATTAAA	-19	NA	71003997	70902595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918783_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.64	chr14	-	3769	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	-752	at_least_one_novel_splicesite	FALSE	non_canonical	3	332	junction_19	43.0746632232567	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTACAGAGTCTAGTGC	NA	False	NA	-8	True	TTTAAA	-21	NA	71004066	70903032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.66	chr14	-	3918	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	2	-765	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	88.2795783328018	577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGACTGAAAACTTTTTA	NA	False	NA	-21	True	TTTAAA	-8	NA	71004066	70903045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939388_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.7	chr14	-	4917	28	NNC	ENSMUSG00000022100.15	novel	4472	28	NA	NA	13	287	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_24	88.113952283992	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCAGTCACGTGTAGT	NA	False	NA	-7	True	AATAAA	-25	NA	71004055	70901970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920294_70921092_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939323_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ES.11110.70	chr14	-	160	1	Intergenic	novelGene_9257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	496	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTGAGCGAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	70940214	70940054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70940100_70940200
ES.11110.71	chr14	-	3075	1	Intergenic	novelGene_9258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAG	1600	False	NA	NA	False	NA	NA	NA	70993026	70989951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_70990000_70993000
ES.11110.72	chr14	-	6600	3	Genic_Genomic	ENSMUSG00000022100.15	novel	15121	28	NA	NA	-3	-79298	multi-exon	TRUE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGACCCTTAGTAATTCT	NA	False	NA	NA	False	NA	NA	NA	71004071	70997104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_70998705_70998890_71001753_71001933
ES.11111.1	chr14	-	218	1	Intergenic	novelGene_9260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGACAGGCAAGACCAAA	NA	False	NA	NA	False	NA	NA	NA	71008525	71008307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_71008300_71008500
ES.11112.1	chr14	-	172	1	Intergenic	novelGene_9261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	71011431	71011259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_71011300_71011400
ES.11113.1	chr14	-	176	1	Intergenic	novelGene_9262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGACTGTGAG	NA	False	NA	NA	False	NA	NA	NA	71062364	71062188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_71062200_71062400
ES.11114.1	chr14	+	3126	1	Genic_Genomic	ENSMUSG00000099528.2	novel	NA	NA	NA	NA	-11	-17907	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71090361	71093487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_71090400_71093500
ES.11115.1	chr14	+	3312	10	NNC	ENSMUSG00000022103.11	novel	3472	9	NA	NA	-1033	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.58198889747161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCCCGTGCTTCACT	NA	False	NA	9	True	AATAAA	-14	NA	71126526	71217261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_71126695_71127870_71128335_71133211_71133527_71138928_71139013_71163157_71163513_71203646_71203757_71204436_71204578_71205683_71205857_71214695_71214750_71215813
ES.11115.2	chr14	+	3463	9	FSM	ENSMUSG00000022103.11	ENSMUST00000022699.10	3472	9	10	-1	10	1	multi-exon	FALSE	canonical	0	0	junction_6	2.43669858620224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTGTGTCTTTGCCTA	NA	False	NA	27	True	AATAAA	-32	NA	71127569	71217279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_71128335_71133211_71133527_71138928_71139013_71163157_71163513_71203646_71203757_71204436_71204578_71205683_71205857_71214695_71214750_71215813
ES.11116.1	chr14	-	177	1	Intergenic	novelGene_9263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGCATTGTAGATGT	NA	False	NA	NA	False	NA	NA	NA	72624017	72623840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_72623800_72624000
ES.11117.1	chr14	-	6034	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	4	35797	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.8263931629801	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATCTCCAAATGTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	72947433	72739588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72739609_72775504_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.10	chr14	-	5925	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-571	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	39.4906368649583	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72948014	72775385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947946
ES.11117.12	chr14	-	6017	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_24	38.9581105162969	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTTTTGTATTTATA	NA	False	NA	-2	True	AATAAA	-23	NA	72947456	72775386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72947157
ES.11117.14	chr14	-	5657	23	NIC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-52	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	40.8225600000622	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	7093	False	NA	-3	True	AATAAA	-22	NA	72840454	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72840361
ES.11117.15	chr14	-	5930	24	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	40.0443987997859	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947446	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72947157
ES.11117.16	chr14	-	5888	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8263931629801	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947448	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776728_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.17	chr14	-	5961	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-433	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	39.6605597539924	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947876	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947770
ES.11117.18	chr14	-	6075	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	42.1178694921236	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947454	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72889455_72889532_72921073_72921212_72947157
ES.11117.19	chr14	-	6011	28	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.3617919998358	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947446	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776728_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72939381_72939503_72947153
ES.11117.2	chr14	-	5819	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-133	-1586	-133	2	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTTGTATTTATAAAC	7012	False	NA	1	True	AATAAA	-26	NA	72840535	72775383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.20	chr14	-	5792	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-715	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9214100216337	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72948158	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776762_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.21	chr14	-	8450	25	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	4	-2	intron_retention	FALSE	canonical	1	5	junction_6	41.250231480832	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTTTTTTGTATTTAT	NA	False	NA	-3	True	AATAAA	-22	NA	72947433	72775387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795004_72795188_72796419_72796596_72796681_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.23	chr14	-	5495	25	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-38	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.0994340461045	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	7107	False	NA	-4	True	AATAAA	-21	NA	72840440	72775388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776762_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.26	chr14	-	5455	25	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.0994340461045	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	7130	False	NA	-4	True	AATAAA	-21	NA	72840417	72775388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776752_72776992_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.27	chr14	-	5873	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	41.9834416764514	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	NA	False	NA	-4	True	AATAAA	-21	NA	72947446	72775388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.3	chr14	-	4677	18	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.0769210566588	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTTGTATTTATAAAC	NA	False	NA	1	True	AATAAA	-26	NA	72947448	72775383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776761_72776987_72777922_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72889455_72889532_72921073_72921212_72947157
ES.11117.30	chr14	-	5759	25	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-697	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	49.3851079667635	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	NA	False	NA	-4	True	AATAAA	-21	NA	72948140	72775388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.32	chr14	-	5928	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8263931629801	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATATGTTTTTTGTATTT	NA	False	NA	-5	True	AATAAA	-20	NA	72947456	72775389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776762_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.34	chr14	-	5894	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8263931629801	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATATGTTTTTTGTATTT	NA	False	NA	-5	True	AATAAA	-20	NA	72947448	72775389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776736_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.35	chr14	-	6123	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-690	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	40.8263931629801	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATATGTTTTTTGTATTT	NA	False	NA	-5	True	AATAAA	-20	NA	72948133	72775389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157_72947292_72947997
ES.11117.36	chr14	-	6461	26	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	39.6605597539924	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	False	NA	-6	True	AATAAA	-19	NA	72947442	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72946833
ES.11117.38	chr14	-	6137	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.2526784002504	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	False	NA	-6	True	AATAAA	-19	NA	72947443	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796417_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806400_72808870_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.39	chr14	-	5749	25	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-589	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	39.6715464435434	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	False	NA	-6	True	AATAAA	-19	NA	72948032	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72947997
ES.11117.40	chr14	-	5361	22	NIC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_19	50.7602519162698	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	7134	False	NA	-6	True	AATAAA	-19	NA	72840413	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72827193_72827432_72836505_72836583_72840361
ES.11117.41	chr14	-	5491	23	NIC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-82	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	49.7564315374288	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	7063	False	NA	-6	True	AATAAA	-19	NA	72840484	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72827193_72827432_72836505_72836583_72840361
ES.11117.42	chr14	-	5644	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-578	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9214100216337	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	False	NA	-6	True	AATAAA	-19	NA	72948021	72775390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776754_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.45	chr14	-	5736	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-671	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9214100216337	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATATGTTTTTTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	72948114	72775392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776762_72776992_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.47	chr14	-	5745	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-698	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9214100216337	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGATATGTTTTTTGT	NA	False	NA	-9	True	AATAAA	-16	NA	72948141	72775393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776738_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.50	chr14	-	5590	9	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	3635	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.3836286039226	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAGATATGTTTTTTG	NA	False	NA	-10	True	AATAAA	-15	NA	72798523	72775394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796692
ES.11117.52	chr14	-	6095	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	41.3949562144955	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGAGATATGTTTTTT	NA	False	NA	-11	True	AATAAA	-14	NA	72947434	72775395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802156_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.53	chr14	-	6038	27	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-691	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	57.186720538226	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGAGATATGTTTT	NA	False	NA	-13	True	AATAAA	-12	NA	72948134	72775397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72844943_72845000_72889455_72889532_72921073_72921212_72947997
ES.11117.54	chr14	-	5447	25	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-9	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.0994340461045	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTTTGAGATATGTT	7136	False	NA	-15	True	AATAAA	-10	NA	72840411	72775399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776754_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.55	chr14	-	5510	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-4	637	-4	-637	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTATGTCAATGAT	NA	False	NA	NA	False	AATAGA	-16	NA	72947447	72776022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.56	chr14	-	5293	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	1	849	1	735	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTATCACATGTT	NA	False	NA	NA	False	AATACA	-24	NA	72947442	72776234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.57	chr14	-	4592	23	NIC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-51	510	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	49.9792518935079	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTAATGTATAATGTC	7094	False	NA	NA	False	AGTAAA	-30	NA	72840453	72776459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.58	chr14	-	3819	26	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	83	-520	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	39.6605597539924	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGGCTTTGGCATTTC	NA	False	NA	82	True	NA	NA	NA	72946899	72777489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72946833
ES.11117.59	chr14	-	3964	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-5	-612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	40.4234387453616	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	NA	False	NA	-10	True	AATATA	-19	NA	72947448	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808941_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.6	chr14	-	5552	25	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-115	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.0994340461045	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTTTGTATTTATAAA	7030	False	NA	0	True	AATAAA	-25	NA	72840517	72775384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72776738_72776985_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.60	chr14	-	3624	24	FSM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-136	612	-136	-612	multi-exon	FALSE	canonical	3	32	junction_23	34.1903931941048	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	7009	False	NA	-10	True	AATATA	-19	NA	72840538	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.61	chr14	-	3863	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	138	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	39.6605597539924	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	NA	False	NA	-10	True	AATATA	-19	NA	72946844	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72946642
ES.11117.62	chr14	-	3952	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	-5	2196	-5	-612	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	NA	False	NA	-10	True	AATATA	-19	NA	72947448	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.63	chr14	-	3881	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-5	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	41.586074592344	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	NA	False	NA	-10	True	AATATA	-19	NA	72947448	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822214_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.64	chr14	-	3678	25	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	1	-612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.930706798816	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATTTTATTTTGTCA	NA	False	NA	-10	True	AATATA	-19	NA	72947442	72777581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794431_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.65	chr14	-	3163	22	ISM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	1	18447	1	5054	5prime_fragment	FALSE	canonical	3	104	junction_21	24.8095695091435	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAACTTGTTTTTTGT	NA	False	NA	NA	False	CATAAA	-9	NA	72947442	72793832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.66	chr14	-	2149	9	ISM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-9	30861	-9	4175	5prime_fragment	FALSE	canonical	3	32	junction_8	50.8281418114021	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCAGTGCCTGTCTCA	7136	False	NA	NA	False	NA	NA	NA	72840411	72807830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11117.67	chr14	-	2976	5	ISM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	0	49647	0	10782	5prime_fragment	FALSE	canonical	3	104	junction_4	19.3002590656188	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATACCTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	72947443	72825032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ES.11117.68	chr14	-	4633	1	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-17	28	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAGAAAAAAAG	7128	False	NA	NA	False	NA	NA	NA	72840419	72835786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_72835800_72840400
ES.11117.69	chr14	-	910	2	ISM	ENSMUSG00000033487.15	ENSMUST00000162825.8	4100	24	-101	58845	-101	0	5prime_fragment	FALSE	canonical	3	32	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	7044	False	NA	NA	False	NA	NA	NA	72840503	72835814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_72836583_72840361
ES.11117.7	chr14	-	6055	26	NNC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	-752	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_25	35.8196817406297	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72948195	72775385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947997
ES.11117.70	chr14	-	6854	1	Intergenic	novelGene_9264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72849748	72842894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_72842900_72849700
ES.11117.8	chr14	-	5774	24	NNC	ENSMUSG00000033487.15	novel	4100	24	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.0846265862108	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	7068	False	NA	-1	True	AATAAA	-24	NA	72840479	72775385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799024_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ES.11118.1	chr14	-	6591	2	Intergenic	novelGene_9265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGTTTGTTTCTTTTGT	NA	False	NA	NA	False	ATTAAA	-45	NA	73084898	73059595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73066080_73084791
ES.11118.2	chr14	-	3267	1	Intergenic	novelGene_9266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGAGAGTGTATCCAC	NA	False	NA	NA	False	AATAAA	-24	NA	73067772	73064505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73064500_73067800
ES.11118.3	chr14	-	2347	1	Intergenic	novelGene_9267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTTATGGTTATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	73074635	73072288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73072300_73074600
ES.11119.1	chr14	+	104	1	Intergenic	novelGene_9268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGAGATATGTGTGTGT	NA	False	NA	5	True	AATAAA	-15	NA	73264214	73264318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73264200_73264300
ES.1112.1	chr1	+	176	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGAACACTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	102024828	102025004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_102024800_102025000
ES.11120.1	chr14	+	1981	15	NIC	ENSMUSG00000022106.15	novel	3531	15	NA	NA	-3	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.2978923451592	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGACGAACAACTTCT	9683	False	NA	NA	False	NA	NA	NA	73379972	73420129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380034_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.10	chr14	+	3205	9	ISM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	8432	15183	46	2195	intron_retention	FALSE	canonical	1	2	junction_4	15.7594217850783	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTCTTTTTTATTT	3922	False	NA	NA	False	AATAAA	-24	NA	73388970	73406475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204
ES.11120.2	chr14	+	3271	14	NIC	ENSMUSG00000022106.15	novel	3531	15	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.9089246033007	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACTGCCTTCTTAAAT	9695	False	NA	NA	False	AATAAA	-12	NA	73379984	73421489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380034_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.3	chr14	+	2423	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	4	7	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGACGAACAACTTCT	9861	False	NA	NA	False	NA	NA	NA	73380150	73420129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.4	chr14	+	3542	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-32	8	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	10.9274042327218	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTTCTTAAATTGTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	73380399	73421495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380629_73388972_73389056_73391754_73391851_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.5	chr14	+	2128	16	FSM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	-42	1536	-5	0	multi-exon	FALSE	canonical	1	2	junction_5	12.7774106227444	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCATTGACGAAC	NA	False	NA	NA	False	NA	NA	NA	73380496	73420122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.6	chr14	+	1908	14	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.9089246033007	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAGCCATTGACGAA	NA	False	NA	NA	False	NA	NA	NA	73380574	73420121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380629_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.7	chr14	+	1829	9	ISM	ENSMUSG00000022106.15	ENSMUST00000171767.8	2692	15	283	40167	-11	836	5prime_fragment	FALSE	canonical	3	24	junction_5	7.36545993132812	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACTAGAAGAAAGGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	73380585	73405116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204
ES.11120.8	chr14	+	2990	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCTGGAATCCTATGC	NA	False	NA	NA	False	AATAAA	-17	NA	73380585	73421131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11120.9	chr14	+	1790	14	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	11.7940913900129	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAGCCATTGACGAA	NA	False	NA	NA	False	NA	NA	NA	73380608	73420121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ES.11121.1	chr14	-	4067	1	Antisense	novelGene_ENSMUSG00000022106.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	73406630	73402563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_73402600_73406600
ES.11122.1	chr14	-	1771	1	Intergenic	novelGene_9269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	73426582	73424811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73424800_73426600
ES.11122.2	chr14	-	604	3	Intergenic	novelGene_9270	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	43	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	73431988	73424811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73425028_73425702_73425852_73431749
ES.11123.1	chr14	+	1803	1	FSM	ENSMUSG00000033446.8	ENSMUST00000044405.8	5400	1	84	3513	84	-3513	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCCATTTTACTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	73475418	73477221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73475400_73477200
ES.11124.1	chr14	+	176	1	Intergenic	novelGene_9271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGCTTAATCTTG	1947	False	NA	NA	False	NA	NA	NA	73511981	73512157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73512000_73512200
ES.11125.1	chr14	+	175	1	Intergenic	novelGene_9272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCTAGCAGGGCT	6389	False	NA	NA	False	NA	NA	NA	73531369	73531544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73531400_73531500
ES.11126.1	chr14	-	4910	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-101	-153	-101	153	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTTTTATGAAATGA	NA	False	NA	NA	False	AATATA	-16	NA	73563363	73432788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.2	chr14	-	6238	3	NIC	ENSMUSG00000022105.7	novel	4656	27	NA	NA	-2573	0	intron_retention	FALSE	canonical	3	21	junction_2	3.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGATATGATCTCTG	1831	False	NA	-13	True	AATAAA	-20	NA	73443279	73432941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_73436022_73436621_73436765_73440264
ES.11126.3	chr14	-	4931	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-276	1	-276	-1	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTGATATGATCTCT	NA	False	NA	-14	True	AATAAA	-19	NA	73563538	73432942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.4	chr14	-	4731	27	NNC	ENSMUSG00000022105.7	novel	4656	27	NA	NA	-95	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	11.736064378683	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTGTGATATGATCTC	NA	False	NA	-15	True	AATAAA	-18	NA	73563357	73432943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450552_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.5	chr14	-	4795	27	NNC	ENSMUSG00000022105.7	novel	4656	27	NA	NA	-169	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.7406011761039	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGTGATATGATCT	NA	False	NA	-16	True	AATAAA	-17	NA	73563431	73432944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454193_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.6	chr14	-	4645	26	NNC	ENSMUSG00000022105.7	novel	4656	27	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	11.6245257967798	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGTGATATGATCT	NA	False	NA	-16	True	AATAAA	-17	NA	73563266	73432944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73532323_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.8	chr14	-	3189	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-127	1594	-127	-122	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGTGTGGGTGATTC	NA	False	NA	NA	False	TATAAA	-19	NA	73563389	73434535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11126.9	chr14	-	2543	17	ISM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	-170	66512	-170	386	5prime_fragment	FALSE	canonical	3	27	junction_5	7.88194138521722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGTTTTATCTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	73563432	73499453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ES.11127.1	chr14	-	1810	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-15	1	-15	-1	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTGGATGCTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	73622744	73599666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ES.11127.2	chr14	-	3977	4	NIC	ENSMUSG00000022108.9	novel	1796	6	NA	NA	45	-3	intron_retention	FALSE	canonical	3	633	junction_1	112.002976150934	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTTGTGGATGCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	73622684	73599668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_73600584_73601981_73602133_73603191_73605868_73622449
ES.11127.4	chr14	-	1634	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-22	184	-22	-184	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGAGACTGTGCGTTGT	NA	False	NA	-6	True	TATAAA	-15	NA	73622751	73599849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ES.11127.5	chr14	-	1199	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	-43	640	-43	19	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTGTCTTTGATGT	NA	False	NA	0	True	ATTAAA	-44	NA	73622772	73600305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ES.11127.6	chr14	-	2894	5	NIC	ENSMUSG00000022108.9	novel	1796	6	NA	NA	2	-12	intron_retention	FALSE	canonical	3	633	junction_1	97.8634252415068	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAACAAAACCT	NA	False	NA	-31	True	ATTAAA	-13	NA	73622727	73600336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73605868_73622449
ES.11127.8	chr14	-	3865	4	ISM	ENSMUSG00000022108.9	ENSMUST00000226722.2	935	5	-1171	12	-552	-12	intron_retention	FALSE	canonical	3	633	junction_1	112.529502304457	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAACAAAACCT	NA	False	NA	-31	True	ATTAAA	-13	NA	73607116	73600336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760
ES.11127.9	chr14	-	1244	2	NNC	ENSMUSG00000022108.9	novel	783	2	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCTCCTTAATTATGG	NA	False	NA	NA	False	AATAAA	-18	NA	73622751	73617630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73618227_73622103
ES.11128.1	chr14	+	163	1	Intergenic	novelGene_9273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAAAACAAAGT	NA	False	NA	NA	False	NA	NA	NA	73666072	73666235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73666100_73666200
ES.11129.1	chr14	+	185	1	Intergenic	novelGene_9274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73681854	73682039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73681900_73682000
ES.1113.1	chr1	+	233	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTACTTCAGTGCACA	NA	False	NA	NA	False	NA	NA	NA	103498244	103498477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_103498200_103498500
ES.11130.1	chr14	+	1340	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	-8	-4	-8	4	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCAATTTTTTAAA	NA	False	NA	19	True	AATAAA	-21	NA	73747456	73755989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ES.11130.2	chr14	+	2605	6	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	317	junction_5	16.1170716943246	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCACAATTAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	73747460	73756289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ES.11130.3	chr14	+	5363	4	NIC	ENSMUSG00000022109.7	novel	2103	6	NA	NA	-1	5	intron_retention	FALSE	canonical	3	317	junction_3	16.9901932498329	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTCAATTTTTTAAAA	NA	False	NA	20	True	AATAAA	-22	NA	73747470	73755990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73751416_73752729_73752788_73754075_73754779_73755333
ES.11130.4	chr14	+	2290	6	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	317	junction_5	16.1170716943246	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTTTTTCAATTTT	NA	False	NA	14	True	AATAAA	-16	NA	73747470	73755984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ES.11130.5	chr14	+	1307	7	NNC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	130.274070072802	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTCAATTTTTTAA	NA	False	NA	18	True	AATAAA	-20	NA	73747476	73755988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754767_73755333
ES.11130.6	chr14	+	1801	6	FSM	ENSMUSG00000022109.7	ENSMUST00000228141.2	2103	6	0	302	0	2	multi-exon	FALSE	canonical	3	317	junction_5	13.5735036007657	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTTTCAATTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	73747477	73755987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754779_73755333
ES.11130.7	chr14	+	5652	4	NIC	ENSMUSG00000022109.7	novel	2103	6	NA	NA	11	8	intron_retention	FALSE	canonical	3	317	junction_3	16.9901932498329	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGTCTCTGAGATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	73747488	73756297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73751416_73752729_73752788_73754075_73754779_73755333
ES.11130.8	chr14	+	4855	5	NIC	ENSMUSG00000022109.7	novel	1328	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	317	junction_4	18.0138835346518	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	False	NA	15	True	AATAAA	-17	NA	73747489	73755985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ES.11130.9	chr14	+	4138	2	NIC	ENSMUSG00000022109.7	novel	2103	6	NA	NA	3078	-4	intron_retention	FALSE	canonical	3	352	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTAATTTTTTTCAAT	NA	False	NA	11	True	AATAAA	-13	NA	73750555	73755981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73752788_73754075
ES.11131.1	chr14	-	4799	2	NIC	ENSMUSG00000033405.5	novel	3579	5	NA	NA	-29	0	intron_retention	FALSE	canonical	3	20	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCAGAGACTTAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	73762680	73756316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_73760935_73762499
ES.11131.2	chr14	-	3042	3	NNC	ENSMUSG00000033405.5	novel	3579	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCAGAGACTTAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	73762679	73756316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73759115_73760870_73760935_73762499
ES.11131.3	chr14	-	3171	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23005	2	-26	-2	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAGAGACTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	73762677	73756318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_73759115_73760737_73760935_73762499
ES.11131.4	chr14	-	2402	3	NNC	ENSMUSG00000033405.5	novel	3579	5	NA	NA	-10	-622	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTTGTCAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	73762661	73756938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_73759115_73760870_73760935_73762499
ES.11131.5	chr14	-	2501	3	ISM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	23011	666	-20	-666	3prime_fragment	FALSE	canonical	2	19	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACAATGTGCTGTAT	NA	False	NA	NA	False	AATAAA	-29	NA	73762671	73756982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_73759115_73760737_73760935_73762499
ES.11132.1	chr14	+	1671	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	86	472	-15	-113	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTTTTTTTGCTTCC	NA	False	NA	37	True	TATAAA	-40	NA	73790190	73833110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.10	chr14	+	1758	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	22	-4	intron_retention	FALSE	canonical	1	1	junction_5	500.121675195147	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAAAGCTTTATTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	73790227	73833219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819103_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.11	chr14	+	2063	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	23	0	intron_retention	FALSE	canonical	3	12	junction_6	493.082346064022	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790228	73833582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828238_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.13	chr14	+	1560	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	24	-4	intron_retention	FALSE	canonical	3	74	junction_1	503.772435397836	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAAAGCTTTATTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	73790229	73833219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.14	chr14	+	1431	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	24	-133	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGGTCTCTTTTCTTGC	NA	False	NA	17	True	TATAAA	-20	NA	73790229	73833090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.15	chr14	+	1922	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	25	0	intron_retention	FALSE	canonical	3	74	junction_1	503.772435397836	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790230	73833582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.16	chr14	+	1956	10	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	32	0	intron_retention	FALSE	canonical	0	0	junction_4	685.171511375072	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790237	73833582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819077_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.17	chr14	+	1871	10	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	33	-1	intron_retention	FALSE	canonical	3	12	junction_5	675.844492304093	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGGAGTTATGGGTTT	NA	False	NA	10	True	AATAAA	-13	NA	73790238	73833581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828238_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.18	chr14	+	4289	10	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	33	0	intron_retention	FALSE	canonical	3	1524	junction_2	72.5224528876368	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790238	73833582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.19	chr14	+	1508	12	FSM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	33	4	33	-4	multi-exon	FALSE	canonical	3	6	junction_11	475.849184386179	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAAAGCTTTATTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	73790238	73833219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832914_73833137
ES.11132.2	chr14	+	1548	12	NNC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	472.438355767184	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAAAGCTTTATTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	73790209	73833219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832900_73833112
ES.11132.21	chr14	+	2365	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	34	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	500.418824585966	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAAAGCTTTATTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	73790239	73833219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73818484_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.22	chr14	+	9694	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	34	17607	34	8934	5prime_fragment	FALSE	canonical	3	1524	junction_2	49.4120992830254	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTATTTTTCAGTGA	NA	False	NA	NA	False	NA	NA	NA	73790239	73815616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301
ES.11132.23	chr14	+	1684	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	34	2	intron_retention	FALSE	canonical	0	0	junction_2	665.490195269622	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTATTCTTTAGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	73790239	73833225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806121_73806174_73806306_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.24	chr14	+	5624	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	141	-3536	40	3536	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTCCCAACTTAATTT	NA	False	NA	NA	False	NA	NA	NA	73790245	73837118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.26	chr14	+	1506	10	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	7673	133	7673	-133	internal_fragment	FALSE	canonical	3	1524	junction_1	75.5735272743793	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGGTCTCTTTTCTTGC	NA	False	NA	17	True	TATAAA	-20	NA	73797878	73833090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.27	chr14	+	3868	7	NNC	ENSMUSG00000022110.14	novel	435	2	NA	NA	5718	2	intron_retention	FALSE	canonical	3	7	junction_1	633.274470948858	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTTATGGGTTTTTT	NA	False	NA	13	True	AATAAA	-16	NA	73811811	73833584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73811932_73816795_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.28	chr14	+	1651	8	NNC	ENSMUSG00000022110.14	novel	435	2	NA	NA	7021	0	intron_retention	FALSE	canonical	3	52	junction_1	572.614982660554	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73813114	73833582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73813214_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.29	chr14	+	375	2	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	26591	13858	10703	-9108	internal_fragment	FALSE	canonical	3	1557	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACAGGAGCTGTGCTGC	NA	False	NA	NA	False	AATAAA	-8	NA	73816796	73819365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73816925_73819118
ES.11132.3	chr14	+	1774	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	106	349	5	10	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTTTAGTATAAAAATAT	NA	False	NA	NA	False	AATAAA	-23	NA	73790210	73833233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.31	chr14	+	1413	6	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	28425	139	-9317	-139	internal_fragment	FALSE	canonical	3	1617	junction_3	47.8890384117284	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTACGGTGGTCTCTTT	NA	False	NA	11	True	TATAAA	-14	NA	73818630	73833084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.4	chr14	+	2124	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	106	-1	5	1	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGTTATGGGTTTTT	NA	False	NA	12	True	AATAAA	-15	NA	73790210	73833583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11132.5	chr14	+	1601	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	5	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	494.517583104989	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTACGGTGGTCTCTT	NA	False	NA	10	True	TATAAA	-13	NA	73790210	73833083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831139_73831206_73832813
ES.11132.6	chr14	+	1607	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	17	-139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	499.18233141809	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTACGGTGGTCTCTTT	NA	False	NA	11	True	TATAAA	-14	NA	73790222	73833084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830077_73830193_73831116_73831206_73832813
ES.11132.7	chr14	+	5164	1	NIC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	17	1119	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGATTGATTTTTATG	NA	False	NA	NA	False	NA	NA	NA	73790222	73795386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_73790200_73795400
ES.11132.8	chr14	+	3360	10	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	22	-5	22	5	intron_retention	FALSE	canonical	3	1524	junction_2	74.1816256241862	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATTCTTTAGTATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	73790227	73833228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116
ES.11132.9	chr14	+	1608	11	NNC	ENSMUSG00000022110.14	novel	2229	11	NA	NA	22	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	500.418824585966	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGGTCTCTTTTCTTGC	NA	False	NA	17	True	TATAAA	-20	NA	73790227	73833090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816919_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ES.11133.1	chr14	-	178	1	Intergenic	novelGene_9275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	73820500	73820322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_73820300_73820500
ES.11134.1	chr14	+	178	1	Intergenic	novelGene_9276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTAGAGGGTGC	NA	False	NA	NA	False	NA	NA	NA	73923061	73923239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_73923100_73923200
ES.11135.1	chr14	-	205	1	FSM	ENSMUSG00000075581.6	ENSMUST00000100510.6	747	1	585	-43	585	43	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAGTAACTATG	NA	False	NA	NA	False	AATAAA	-19	NA	74034145	74033940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74033900_74034100
ES.11136.1	chr14	-	1733	1	FSM	ENSMUSG00000057886.6	ENSMUST00000181108.2	552	1	-75	-1106	-75	1106	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	AATAAA	-42	NA	74193066	74191333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74191300_74193100
ES.11136.2	chr14	-	1519	2	Genic_Genomic	ENSMUSG00000057886.6	novel	552	1	NA	NA	-73	1082	multi-exon	FALSE	canonical	1	1	junction_1	0	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	74193064	74191357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_74192702_74192889
ES.11137.1	chr14	-	327	1	Intergenic	novelGene_9277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTAATCATTTACAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	74969427	74969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_74969100_74969400
ES.11138.1	chr14	+	1101	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	-4	891	-4	26	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACGTAGGAGTTTAATG	NA	False	NA	39	True	AATAAA	-40	NA	74969732	74987314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ES.11138.11	chr14	+	931	8	NIC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	-12	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	454.208169482331	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTATTTTACCACCA	NA	False	NA	20	True	AATAAA	-21	NA	74969784	74987295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982989_74983158_74987084
ES.11138.12	chr14	+	3678	10	NNC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	8	1813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	417.227829522906	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCTCTGTCTCTCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	74969804	74990018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084_74988746_74988800
ES.11138.13	chr14	+	1131	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	-7	-7	-7	7	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTATTTTACCACCA	NA	False	NA	20	True	AATAAA	-21	NA	74969816	74987295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ES.11138.14	chr14	+	1031	8	NIC	ENSMUSG00000021996.17	novel	1117	9	NA	NA	-6	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	586.630572482741	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTATTTTACCACCA	NA	False	NA	20	True	AATAAA	-21	NA	74969817	74987295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_74969962_74973399_74973475_74975868_74975958_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ES.11138.2	chr14	+	3072	10	NNC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	1	1140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	417.227829522906	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTAAGGTATTTTTGG	NA	False	NA	NA	False	CATAAA	-45	NA	74969737	74989345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084_74988746_74988800
ES.11138.4	chr14	+	942	8	NIC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	460.685469752212	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969745	74987288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74982087_74982187_74982989_74983158_74987084
ES.11138.6	chr14	+	1644	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	15	329	-7	-329	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGCTAAGAAGCCAGTT	NA	False	NA	NA	False	AATAGA	-14	NA	74969751	74987876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ES.11138.7	chr14	+	4980	8	ISM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	17	918	-5	-1	intron_retention	FALSE	canonical	3	1089	junction_1	106.603978177483	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTTAAATTGTTATTT	NA	False	NA	12	True	AATAAA	-13	NA	74969753	74987287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989
ES.11138.9	chr14	+	4348	9	NIC	ENSMUSG00000021996.17	novel	1117	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	441.979337045297	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969770	74987288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_74973140_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ES.11139.1	chr14	+	2014	1	Antisense	novelGene_ENSMUSG00000068015.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-20	NA	75041950	75043964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_75042000_75044000
ES.1114.1	chr1	+	177	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAGTGAATTT	NA	False	NA	NA	False	NA	NA	NA	104132653	104132830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_104132700_104132800
ES.11140.1	chr14	+	3600	1	Intergenic	novelGene_9279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAGCTTAGAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	75045296	75048896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75045300_75048900
ES.11141.1	chr14	+	1382	1	Intergenic	novelGene_9280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAACAAATC	NA	False	NA	NA	False	NA	NA	NA	75069853	75071235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75069900_75071200
ES.11142.1	chr14	+	1672	5	Antisense	novelGene_ENSMUSG00000068015.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTCTTTTGCTTTGT	NA	False	NA	NA	False	GATAAA	-15	NA	75172072	75181841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_75172133_75172856_75172919_75175511_75175628_75177034_75177116_75180488
ES.11143.1	chr14	-	3622	12	ISM	ENSMUSG00000068015.9	ENSMUST00000228134.2	2777	19	71599	-1706	-7598	254	3prime_fragment	FALSE	canonical	3	71	junction_4	17.0797836129286	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGAAAAATAATCTTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	75051096	74991860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045
ES.11143.11	chr14	-	4701	20	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.387048513749	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTGGATTGATTGAC	570	False	NA	-2	True	ATTAAA	-19	NA	75185315	74992115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044976_75049034_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.12	chr14	-	3691	10	NIC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	189	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.6304133537604	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTGGATTGATTGAC	768	False	NA	-2	True	ATTAAA	-19	NA	75185117	74992115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.13	chr14	-	4860	21	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.9922213818486	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTTTGGATTGATTGA	555	False	NA	-3	True	ATTAAA	-18	NA	75185330	74992116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75180125_75180270_75184823
ES.11143.14	chr14	-	4612	19	NNC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	28.008431270284	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTTTGGATTGATTGA	584	False	NA	-3	True	ATTAAA	-18	NA	75185301	74992116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064150_75073088_75073216_75095416_75095562_75184823
ES.11143.15	chr14	-	4487	18	NIC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_16	27.3493356257433	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTTTGGATTGATTG	575	False	NA	-4	True	ATTAAA	-17	NA	75185310	74992117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75095416_75095562_75184823
ES.11143.18	chr14	-	4905	21	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.2696399187743	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTTTGGATTGATTG	554	False	NA	-4	True	ATTAAA	-17	NA	75185331	74992117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75035090_75035280_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.19	chr14	-	4464	21	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	16959	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	45.2241915350623	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCACCTTTGGATTGATT	8318	False	NA	-5	True	ATTAAA	-16	NA	75168347	74992118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049038_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75084826_75084994_75095416_75095562_75167308_75167411_75168279
ES.11143.2	chr14	-	4947	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-9	-244	1	244	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATCATATATATGAAAA	570	False	NA	NA	False	ATTAAA	-2	NA	75185315	74991870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.21	chr14	-	4715	20	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.8197185497242	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCACCTTTGGATTGA	583	False	NA	-7	True	ATTAAA	-14	NA	75185302	74992120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032319_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.22	chr14	-	4242	20	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	23645	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.2477367601492	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCACCTTTGGATTGA	NA	False	NA	-7	True	ATTAAA	-14	NA	75099050	74992120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75099013
ES.11143.25	chr14	-	4407	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	-18	-1264	-18	-234	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTATTTTCATGAAA	551	False	NA	NA	False	ATTAAA	-20	NA	75185334	74992348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.26	chr14	-	3332	20	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	1	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.8197185497242	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATTCATGTTTCTTTC	570	False	NA	NA	False	ATTAAA	-31	NA	75185315	74993516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032319_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.27	chr14	-	3317	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-32	1409	-22	43	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTGGATTCATGT	547	False	NA	NA	False	ATTAAA	-24	NA	75185338	74993523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.28	chr14	-	3451	21	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	1	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	39.8515683505681	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTTTTTTTCTGGAT	570	False	NA	NA	False	ATTAAA	-18	NA	75185315	74993529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75084826_75084994_75095416_75095562_75184827
ES.11143.29	chr14	-	3230	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	-22	-83	-22	37	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTTTTTTTCTGGAT	547	False	NA	NA	False	ATTAAA	-18	NA	75185338	74993529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.3	chr14	-	4722	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	-26	-2	-16	2	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGATTGATTGACTTA	553	False	NA	1	True	ATTAAA	-22	NA	75185332	74992112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.30	chr14	-	3078	18	NIC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	1	35	combination_of_known_splicesites	FALSE	canonical	2	4	junction_16	27.3493356257433	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTTTTTTTTCTGG	570	False	NA	NA	False	ATTAAA	-16	NA	75185315	74993531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75095416_75095562_75184823
ES.11143.31	chr14	-	3196	19	NNC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	-3	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.3087584056443	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTTTTTTTTCTGG	576	False	NA	NA	False	ATTAAA	-16	NA	75185309	74993531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044976_75049036_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.32	chr14	-	3060	18	NIC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	1	35	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	28.0855095690084	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTTTTTTTTCTGG	570	False	NA	NA	False	ATTAAA	-16	NA	75185315	74993531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75184823
ES.11143.33	chr14	-	3484	21	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-8	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.2696399187743	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTTTTTTTTCTGG	561	False	NA	NA	False	ATTAAA	-16	NA	75185324	74993531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75035090_75035280_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.34	chr14	-	3147	19	NIC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	1	33	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	31.1091269208536	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTTTTTTTTTTCT	580	False	NA	NA	False	ATTAAA	-14	NA	75185305	74993533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75095416_75095562_75184823
ES.11143.35	chr14	-	3218	19	NNC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.0234139318367	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTTTTTTTTTTCT	569	False	NA	NA	False	ATTAAA	-14	NA	75185316	74993533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013113_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.37	chr14	-	3106	19	NNC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	27.4631065653946	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCACCCCAAAGTTATT	570	False	NA	NA	False	AATAAA	-15	NA	75185315	74993604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073114_75073216_75095416_75095562_75184823
ES.11143.39	chr14	-	5419	5	NNC	ENSMUSG00000068015.9	novel	2777	19	NA	NA	4253	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.6826457785523	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAGAGAGCACCCCAA	NA	False	NA	NA	False	AATAAA	-8	NA	75028178	74993611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75027034_75027260
ES.11143.4	chr14	-	4601	19	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	31.7581524480499	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGATTGATTGACTTA	569	False	NA	1	True	ATTAAA	-22	NA	75185316	74992112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054596_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.40	chr14	-	3527	1	Genic_Genomic	ENSMUSG00000068015.9	novel	NA	NA	NA	NA	29019	877	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	75003412	74999885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_74999900_75003400
ES.11143.41	chr14	-	4062	19	NIC	ENSMUSG00000068015.9	novel	2678	10	NA	NA	1	-16	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	27.4246442294355	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCTTTTTATTTTTTT	570	False	NA	NA	False	AATAAA	-18	NA	75185315	75000778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75002688_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.42	chr14	-	4163	20	NIC	ENSMUSG00000068015.9	novel	2678	10	NA	NA	-19	-16	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	30.6701692166573	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCTTTTTATTTTTTT	550	False	NA	NA	False	AATAAA	-18	NA	75185335	75000778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75002688_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.44	chr14	-	5505	1	Intergenic	novelGene_9278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75010741	75005236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75005200_75010700
ES.11143.45	chr14	-	2074	5	NNC	ENSMUSG00000068015.9	novel	3125	19	NA	NA	41	622	intron_retention	FALSE	canonical	1	3	junction_2	35.3093472043877	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAT	620	False	NA	NA	False	NA	NA	NA	75185265	75055790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75057071_75064037_75064144_75073114_75073216_75095416_75095562_75184823
ES.11143.46	chr14	-	1645	5	ISM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	1	62683	1	117	5prime_fragment	FALSE	canonical	3	67	junction_3	12.2754836971909	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTTTGTCAGAATTT	570	False	NA	NA	False	AATAAA	-22	NA	75185315	75056295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.47	chr14	-	260	1	Intergenic	novelGene_9281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTGCAAGGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	75145810	75145550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75145600_75145800
ES.11143.48	chr14	-	4417	1	NIC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	20	-124457	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGAAAAGATGGTTT	599	False	NA	NA	False	NA	NA	NA	75185286	75180869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75180900_75185300
ES.11143.5	chr14	-	4649	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	-25	-1499	-25	1	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGGATTGATTGACTT	544	False	NA	0	True	ATTAAA	-21	NA	75185341	74992113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.6	chr14	-	4610	19	NIC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	31.1091269208536	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	536	False	NA	-1	True	ATTAAA	-20	NA	75185349	74992114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75095416_75095562_75184823
ES.11143.7	chr14	-	3395	12	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	-7595	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.8992186457651	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	NA	False	NA	-1	True	ATTAAA	-20	NA	75051093	74992114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042878_75042993_75044913_75044982_75049039_75049156_75051045
ES.11143.8	chr14	-	4420	19	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.3087584056443	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	771	False	NA	-1	True	ATTAAA	-20	NA	75185114	74992114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044976_75049034_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ES.11143.9	chr14	-	4321	19	NNC	ENSMUSG00000068015.9	novel	4694	20	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	27.9713257055935	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	642	False	NA	-1	True	ATTAAA	-20	NA	75185243	74992114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75185052
ES.11144.1	chr14	+	2514	1	Genic_Genomic	ENSMUSG00000115019.2	novel	NA	NA	NA	NA	-43	-9548	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1985	False	NA	NA	False	NA	NA	NA	75212482	75214996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_75212500_75215000
ES.11145.1	chr14	+	3905	1	Intergenic	novelGene_9283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTCTCAGCCAAGCC	8780	False	NA	NA	False	NA	NA	NA	75300980	75304885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75301000_75304900
ES.11146.1	chr14	-	3154	4	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTAGTTGTCTCGGGTA	NA	False	NA	NA	False	NA	NA	NA	75304563	75277266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_75279993_75280449_75280622_75281108_75281256_75304454
ES.11146.2	chr14	-	5797	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	75304630	75280188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_75285810_75304454
ES.11146.3	chr14	-	5229	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATCGCACTTATTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	75304595	75280721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_75285810_75304454
ES.11146.4	chr14	-	2433	2	Intergenic	novelGene_9282	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCACTTGTGGGAAATG	NA	False	NA	NA	False	NA	NA	NA	75304563	75296063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75298388_75304454
ES.11147.1	chr14	+	170	1	Intergenic	novelGene_9284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCCGGTTTGTTGT	135	False	NA	NA	False	NA	NA	NA	75331919	75332089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75331900_75332100
ES.11148.1	chr14	-	160	1	Intergenic	novelGene_9285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACAATGGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	75362413	75362253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75362300_75362400
ES.11149.1	chr14	+	3967	16	FSM	ENSMUSG00000021998.17	ENSMUST00000124499.8	2523	16	-424	-1020	-29	0	multi-exon	TRUE	canonical	0	0	junction_1	6.22325388272798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCCCCCAATTC	NA	False	NA	NA	False	AATAAA	-23	NA	75368569	75468256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_75369152_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.2	chr14	+	4210	15	NIC	ENSMUSG00000021998.17	novel	3841	17	NA	NA	446	0	intron_retention	TRUE	canonical	2	7	junction_1	4.99183005990176	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCCCCCAATTC	NA	False	NA	NA	False	AATAAA	-23	NA	75414093	75468256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.3	chr14	+	3561	17	NIC	ENSMUSG00000021998.17	novel	692	3	NA	NA	476	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.34921254960015	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCATATGCTTAAAGG	NA	False	NA	NA	False	AATAAA	-21	NA	75414123	75468282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75414155_75414254_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.4	chr14	+	3601	16	ISM	ENSMUSG00000021998.17	ENSMUST00000145303.8	3841	17	40393	19	517	7	3prime_fragment	FALSE	canonical	2	7	junction_1	5.24679796532027	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCCCAATTCTGGTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	75414164	75468263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.5	chr14	+	2469	16	ISM	ENSMUSG00000021998.17	ENSMUST00000145303.8	3841	17	40497	1047	621	-1	3prime_fragment	FALSE	canonical	2	7	junction_1	5.24679796532027	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTCACAGCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	75414268	75467235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75414374_75435516_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.6	chr14	+	3591	15	ISM	ENSMUSG00000021998.17	ENSMUST00000131802.2	3594	16	7566	-24	-5	-2	3prime_fragment	FALSE	canonical	2	7	junction_11	4.86396579606663	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGCATATGCTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	75435334	75468280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.11149.7	chr14	+	2523	15	ISM	ENSMUSG00000021998.17	ENSMUST00000131802.2	3594	16	7596	1014	25	6	3prime_fragment	FALSE	canonical	2	7	junction_11	4.86396579606663	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGCCCCTCCTTGCATC	NA	False	NA	NA	False	AATAAA	-18	NA	75435364	75467242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75435604_75436719_75436884_75437819_75437950_75440075_75440209_75442004_75442087_75443558_75443725_75445859_75446003_75447878_75447975_75449770_75449967_75451924_75452004_75452548_75452664_75453767_75453902_75461510_75461635_75464406_75464532_75466645
ES.1115.1	chr1	+	2971	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	-30	82	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTTAAAGTTAAATAC	NA	False	NA	NA	False	AATACA	-31	NA	105383665	105386636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_105383700_105386600
ES.1115.2	chr1	+	2743	2	NNC	ENSMUSG00000067017.6	novel	2858	2	NA	NA	-9	82	intron_retention	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTTAAAGTTAAATAC	NA	False	NA	NA	False	AATACA	-31	NA	105383686	105386636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105383927_105384133
ES.1115.3	chr1	+	1506	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	-9	-1362	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCCTGCTGCACATGA	NA	False	NA	NA	False	NA	NA	NA	105383686	105385192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_105383700_105385200
ES.1115.4	chr1	+	2094	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	-4	-769	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAGTTTTCATTCTTA	NA	False	NA	NA	False	NA	NA	NA	105383691	105385785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_105383700_105385800
ES.1115.5	chr1	+	2891	2	NNC	ENSMUSG00000067017.6	novel	2858	2	NA	NA	-2	82	intron_retention	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTTAAAGTTAAATAC	NA	False	NA	NA	False	AATACA	-31	NA	105383693	105386636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105383811_105383862
ES.1115.6	chr1	+	1026	1	NIC	ENSMUSG00000067017.6	novel	2858	2	NA	NA	4	-1829	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTCTTGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	105383699	105384725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105383700_105384700
ES.11150.1	chr14	-	176	1	Intergenic	novelGene_9286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACACAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	75502010	75501834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75501800_75502000
ES.11151.1	chr14	+	6225	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-71	-10	-58	10	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCCTTGCTCTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	75521754	75581876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.10	chr14	+	5218	12	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-4	10	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	43.7432403278514	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCCTTGCTCTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	75521808	75581876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.12	chr14	+	5157	17	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-17	6863	-4	-6470	5prime_fragment	FALSE	canonical	3	74	junction_1	24.455316395418	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGGTGACTTCCTTTG	NA	False	NA	NA	False	AAGAAA	-24	NA	75521808	75575003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809
ES.11151.13	chr14	+	6138	17	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-4	-5486	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	25.2690985939348	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATATTGTAATTGTGA	NA	False	NA	NA	False	AGTAAA	-16	NA	75521808	75575987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809
ES.11151.14	chr14	+	6988	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-3	51857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	37.26481808176	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATTTGGTTTGTCAAGG	NA	False	NA	NA	False	NA	NA	NA	75521809	75633723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75632059
ES.11151.15	chr14	+	5965	14	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-3	-5313	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	37.982711732215	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGTCTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	75521809	75576160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809
ES.11151.17	chr14	+	2783	12	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-16	16500	-3	6085	5prime_fragment	FALSE	canonical	3	74	junction_1	17.8339447901147	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGGAACGGGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75521809	75565366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983
ES.11151.18	chr14	+	6147	19	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-3	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.3442474263487	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCCTTGCTCTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	75521809	75581876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529031_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.19	chr14	+	5405	13	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.5460534793377	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75521810	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.2	chr14	+	6050	20	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-58	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	40.8638032433652	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75521754	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565227_75565387_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.20	chr14	+	6029	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	-15	130	-2	-130	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTTTTTTTTACACGT	NA	False	NA	NA	False	AATAAA	-10	NA	75521810	75581736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.21	chr14	+	6031	20	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	36.9537406410829	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTTGTAGATTTTCC	NA	False	NA	12	True	AATAAA	-13	NA	75521810	75581864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565307_75565429_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.22	chr14	+	6166	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	41.6531830034751	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75521810	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576754_75576930_75581033
ES.11151.25	chr14	+	6328	20	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	42.9545272671273	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCCTTGCTCTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	75521812	75581876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75524927_75525092_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.26	chr14	+	7902	18	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_6	41.4210384001334	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75521815	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546503_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75576913_75581033
ES.11151.27	chr14	+	6166	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	40.1140349811526	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521817	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576930_75581033
ES.11151.28	chr14	+	6107	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	36.9838553365594	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521817	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559078_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.30	chr14	+	6116	20	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	1	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	40.8638032433652	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTCCTTGCTCTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	75521817	75581875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565289_75565330_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.31	chr14	+	5806	17	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	1	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	35.7558998628198	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTTCCTTGCTCTTTA	NA	False	NA	22	True	AATAAA	-23	NA	75521817	75581874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75576748_75576913_75581033
ES.11151.32	chr14	+	6088	20	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	1	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	36.9537406410829	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCCTTGCTCTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	75521817	75581876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565335_75565405_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.33	chr14	+	6098	20	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.5187312010132	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75521817	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565114_75565168_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.35	chr14	+	6409	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	2718	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	35.9950699642103	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75524543	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75525092_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.36	chr14	+	5900	19	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	3100	-127	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	36.1509182302316	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTACACGTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	75524925	75581739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75525092_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.37	chr14	+	9818	18	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	3228	1	3228	-1	3prime_fragment	FALSE	canonical	3	83	junction_14	24.0928136136083	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75525053	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.38	chr14	+	5517	15	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	21402	0	21402	0	3prime_fragment	FALSE	canonical	3	83	junction_11	22.433575419947	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75543227	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.39	chr14	+	9939	15	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	24528	27434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.8855833740714	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTTGTGTCGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	75546353	75609300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75603587_75603835_75604174
ES.11151.4	chr14	+	6137	20	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.5187312010132	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75521775	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565348_75565405_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.40	chr14	+	5235	13	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	25283	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	40.262334204012	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTTGTAGATTTTCC	NA	False	NA	12	True	AATAAA	-13	NA	75547108	75581864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576754_75576913_75581033
ES.11151.41	chr14	+	4841	13	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-22031	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	52.5284975566174	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75553480	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565260_75565381_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576930_75581033
ES.11151.42	chr14	+	4920	11	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	37209	-7	-16477	7	3prime_fragment	FALSE	canonical	3	83	junction_7	23.7926459226375	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATTTTCCTTGCTCTTT	NA	False	NA	21	True	AATAAA	-22	NA	75559034	75581873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.43	chr14	+	3942	11	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-14304	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.7825822288595	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTCCTTGCTCTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	75561207	75581875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75561315_75561852_75562045_75564983_75565208_75565330_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.44	chr14	+	4083	8	ISM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	42846	-1	-10853	1	3prime_fragment	FALSE	canonical	3	74	junction_4	27.7995742149158	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75564658	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.45	chr14	+	3867	9	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-10759	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.1737237261468	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75564752	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75565335_75565457_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.46	chr14	+	2263	7	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-10380	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.5200164105003	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75565131	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75565232_75568401_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.47	chr14	+	3530	9	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-10356	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.1737237261468	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTAGATTTTCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	75565155	75581867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75565299_75565357_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.49	chr14	+	5176	4	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-6296	72	intron_retention	FALSE	canonical	3	142	junction_3	7.03957069398096	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATCACCATGCAGAAACT	NA	False	NA	NA	False	AATAAA	-18	NA	75569215	75581545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.5	chr14	+	5844	16	NIC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	37.5933800318915	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521777	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75522106_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11151.51	chr14	+	6429	1	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	-74	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75575437	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_75575400_75581900
ES.11151.52	chr14	+	1548	2	NNC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	4676	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75580187	75581866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75580830_75580960
ES.11151.53	chr14	+	6648	2	Antisense	novelGene_ENSMUSG00000115615.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCCTCAGAACCCAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	75607008	75616281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_75613277_75615901
ES.11151.54	chr14	+	4264	1	Intergenic	novelGene_9289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGATCAGCTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	75611578	75615842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75611600_75615800
ES.11151.7	chr14	+	6014	20	NNC	ENSMUSG00000022000.12	novel	6144	19	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.5187312010132	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTGTAGATTTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	75521790	75581865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565218_75565381_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ES.11152.1	chr14	-	901	1	Intergenic	novelGene_9287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	TATAAA	-29	NA	75533669	75532768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75532800_75533700
ES.11153.1	chr14	-	4899	1	Antisense	novelGene_ENSMUSG00000022000.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTCTGAGGCTGCCGA	NA	False	NA	NA	False	AAAAAG	-4	NA	75579362	75574463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_75574500_75579400
ES.11154.1	chr14	-	3317	1	Genic_Genomic	ENSMUSG00000115615.2	novel	NA	NA	NA	NA	39322	1174	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75598564	75595247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_75595200_75598600
ES.11155.1	chr14	-	4136	1	Intergenic	novelGene_9288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGACTAGTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	75614032	75609896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75609900_75614000
ES.11156.1	chr14	+	134	1	Intergenic	novelGene_9290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTCTAGTTTCATGAC	NA	False	NA	NA	False	NA	NA	NA	75635200	75635334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75635200_75635300
ES.11157.1	chr14	+	208	1	Intergenic	novelGene_9291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGACATATGTCCACTC	NA	False	NA	NA	False	NA	NA	NA	75737695	75737903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75737700_75737900
ES.11158.1	chr14	+	134	1	Intergenic	novelGene_9292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75779577	75779711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_75779600_75779700
ES.11159.1	chr14	-	4174	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	32	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	31.855562457821	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTTTGTTATGTTAT	NA	False	NA	NA	False	AATAAA	-45	NA	75991966	75939782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977012_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.10	chr14	-	4226	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	25.9946354923504	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991975	75939791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977016_75977958_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.11	chr14	-	4135	22	NIC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	26	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	26.1363076191668	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991972	75939791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.12	chr14	-	6751	22	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	23	-2	intron_retention	FALSE	canonical	3	20	junction_19	22.5902071773913	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991975	75939791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.13	chr14	-	6497	22	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	47	-2	intron_retention	FALSE	canonical	3	20	junction_19	22.6728682992713	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991951	75939791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.15	chr14	-	6406	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	65	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.9712173806197	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTGCCACGTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	75991933	75939792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75957355_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.17	chr14	-	4577	25	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	39.0547825709818	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTGCCACGTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	75991983	75939792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75985341_75985516_75985779_75985913_75991704
ES.11159.18	chr14	-	4290	24	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	40.0421800289954	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTGCCACGTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	75991996	75939792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979910_75981005_75981068_75984492_75984640_75985471_75985516_75991704
ES.11159.19	chr14	-	4408	24	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	37.6699927712699	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTCCTACTTTGCT	NA	False	NA	NA	False	AATAAA	-24	NA	75991989	75939803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75985341_75985516_75991704
ES.11159.2	chr14	-	4299	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	-11	-20	-11	0	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCCACGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-38	NA	75992009	75939789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.20	chr14	-	4138	22	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.6409033488439	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTGCTTCCTACTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	75991988	75939805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.21	chr14	-	6686	21	NIC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	24	4	intron_retention	FALSE	canonical	0	0	junction_14	26.9571419108184	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTGCTTCCTACTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	75991974	75939805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.22	chr14	-	4146	22	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.5081170985199	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTGCTTCCTACTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	75991989	75939805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975493_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.23	chr14	-	6533	20	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	73	-1	intron_retention	FALSE	canonical	3	20	junction_17	23.6798826455129	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATCTTTGCTTCCTA	NA	False	NA	NA	False	AATAAA	-17	NA	75991925	75939810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.24	chr14	-	4071	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	67	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	33.8971463242206	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATCTTTGCTTCCTA	NA	False	NA	NA	False	AATAAA	-17	NA	75991931	75939810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979822_75981005_75981068_75984496_75984640_75991704
ES.11159.25	chr14	-	3652	4	ISM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	39618	6	18047	-6	3prime_fragment	FALSE	canonical	3	109	junction_2	6.48074069840786	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGATCTTTGCT	6050	False	NA	NA	False	AATAAA	-12	NA	75952380	75939815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640
ES.11159.26	chr14	-	3949	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	255	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	25.8028123267008	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGATCTTTGCT	NA	False	NA	NA	False	AATAAA	-12	NA	75991743	75939815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977012_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.28	chr14	-	4140	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	9	119	9	-119	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTCACGTGTTTA	NA	False	NA	NA	False	AATGAA	-15	NA	75991989	75939928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.29	chr14	-	2883	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	10	1375	10	-1375	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTGACTAGTGTGATGC	NA	False	NA	NA	False	AATAAA	-10	NA	75991988	75941184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.11159.3	chr14	-	4484	25	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	76	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	42.1885442257598	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75991922	75939790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75985341_75985516_75985779_75985910_75991704
ES.11159.30	chr14	-	3400	18	NNC	ENSMUSG00000034893.10	novel	514	3	NA	NA	-1897	-12824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8408725950034	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	75981051	75952633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75953135_75953225_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005
ES.11159.4	chr14	-	4247	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	22.2812599611096	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75991989	75939790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.5	chr14	-	3804	20	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	-761	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.1493254534284	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75979915	75939790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944680_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780
ES.11159.6	chr14	-	3592	19	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	1150	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.798961673489	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75978004	75939790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75956288_75956402_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975
ES.11159.7	chr14	-	4170	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	110	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.0556076758977	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCCACGTGTTTGT	NA	False	NA	NA	False	AATAAA	-37	NA	75991888	75939790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969532_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
ES.11159.8	chr14	-	4169	22	NIC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	26.542824679188	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGCCACGTGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	75991974	75939791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ES.1116.1	chr1	+	198	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTCATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	105418589	105418787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_105418600_105418800
ES.11160.1	chr14	-	194	1	Intergenic	novelGene_9293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTTAAAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	75993141	75992947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_75992900_75993100
ES.11161.1	chr14	+	200	1	Intergenic	novelGene_9294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAACCATCAGGGGC	NA	False	NA	NA	False	NA	NA	NA	76001849	76002049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76001800_76002000
ES.11162.1	chr14	+	147	1	Intergenic	novelGene_9295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	76008492	76008639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76008500_76008600
ES.11163.1	chr14	+	6607	1	Antisense	novelGene_ENSMUSG00000022003.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	76014428	76021035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_76014400_76021000
ES.11164.1	chr14	-	3588	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	3	-3	3	3	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTACAGTCATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	76024474	75997553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
ES.11164.2	chr14	-	4057	10	NNC	ENSMUSG00000022003.8	novel	3588	10	NA	NA	-4799	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.6886655485621	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTTACAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	76014567	75997555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76013551_76014132_76014435
ES.11164.3	chr14	-	3497	9	NNC	ENSMUSG00000022003.8	novel	3588	10	NA	NA	-3903	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.7466663703177	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	76013671	75997556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76000131_76000768_76000850_76004342_76004482_76006222_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76013551
ES.11164.5	chr14	-	3489	9	NNC	ENSMUSG00000022003.8	novel	3588	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.5400748380367	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGGCTTACAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	76024477	75997557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76000131_76000768_76000850_76004342_76004482_76006222_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76024364
ES.11164.6	chr14	-	3592	10	NNC	ENSMUSG00000022003.8	novel	3588	10	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.1613279700932	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGGCTTACAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	76024379	75997557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024261
ES.11164.7	chr14	-	2605	3	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	20018	167	5309	-167	3prime_fragment	FALSE	canonical	3	43	junction_1	2	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGGCTCCTGTGCTCC	6438	False	NA	NA	False	NA	NA	NA	76004459	75997723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_76000131_76000768_76000850_76004342
ES.11165.1	chr14	-	199	1	Intergenic	novelGene_9296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTGGGCGTGGTGACA	3076	False	NA	NA	False	NA	NA	NA	76047129	76046930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76046900_76047100
ES.11166.1	chr14	+	180	1	Intergenic	novelGene_9297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTTTCGAGATAGGGT	NA	False	NA	NA	False	NA	NA	NA	76068556	76068736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76068600_76068700
ES.11167.1	chr14	+	1065	1	Intergenic	novelGene_9298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	76075586	76076651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76075600_76076700
ES.11168.1	chr14	+	1077	1	FSM	ENSMUSG00000115458.2	ENSMUST00000228454.2	229	1	-719	-129	-719	129	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	76078206	76079283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76078200_76079300
ES.11169.1	chr14	+	1028	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	27	114	27	4	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTCTTTGCTGTGATT	865	False	NA	8	True	AATAAA	-19	NA	76082559	76085741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ES.11169.10	chr14	+	2985	1	FSM	ENSMUSG00000065147.3	ENSMUST00000083213.3	130	1	-2592	-263	-2592	263	mono-exon	FALSE	NA	NA	NA	NA	NA	565	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1058	False	NA	4	True	AATAAA	-15	NA	76082752	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76082800_76085700
ES.11169.11	chr14	+	2012	4	FSM	ENSMUSG00000060126.15_ENSMUSG00000065147.3	ENSMUST00000154533.8	762	4	-41	-1209	12	0	multi-exon	FALSE	canonical	3	5160	junction_2	155.938021876214	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1059	False	NA	4	True	AATAAA	-15	NA	76082753	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133
ES.11169.13	chr14	+	760	5	ISM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	451	118	189	0	3prime_fragment	FALSE	canonical	3	5160	junction_1	187.817730792383	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1289	False	NA	4	True	AATAAA	-15	NA	76082983	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ES.11169.14	chr14	+	4112	1	Intergenic	novelGene_9299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAACTCTTCTCCTTT	1776	False	NA	NA	False	NA	NA	NA	76086176	76090288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76086200_76090300
ES.11169.2	chr14	+	944	7	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-77	11597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2038.82032885032	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCTTCTGGAGAGGCT	970	False	NA	NA	False	ACTAAA	-28	NA	76082664	76097562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538_76085736_76097535
ES.11169.3	chr14	+	1625	4	NIC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-39	0	intron_retention	FALSE	canonical	3	5160	junction_2	210.911250424333	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1008	False	NA	4	True	AATAAA	-15	NA	76082702	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76082897_76083056_76083131_76083642_76084801_76085538
ES.11169.4	chr14	+	864	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-21	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2186.55348894099	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTGCTGTGATTGTGC	1026	False	NA	12	True	AATAAA	-23	NA	76082720	76085745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084690_76084801_76085538
ES.11169.7	chr14	+	737	5	NIC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	2327.03506365933	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1035	False	NA	4	True	AATAAA	-15	NA	76082729	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76085538
ES.11169.8	chr14	+	2494	2	Fusion	ENSMUSG00000060126.15_ENSMUSG00000065147.3	novel	890	3	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	5160	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAAGAACTCTTTGCTG	1036	False	NA	3	True	AATAAA	-14	NA	76082730	76085736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_+_76083131_76083642
ES.11169.9	chr14	+	842	6	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2163.72133141031	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1039	False	NA	4	True	AATAAA	-15	NA	76082733	76085737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085546
ES.1117.1	chr1	+	2871	1	Antisense	novelGene_ENSMUSG00000056536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAATAGTTAAGGTGGG	NA	False	NA	NA	False	NA	NA	NA	105513280	105516151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_105513300_105516200
ES.11170.1	chr14	+	184	1	Intergenic	novelGene_9300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	76097988	76098172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76098000_76098200
ES.11171.1	chr14	+	198	1	Intergenic	novelGene_9301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGAGCAGAGGTCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	76147620	76147818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76147600_76147800
ES.11172.1	chr14	+	5983	3	NNC	ENSMUSG00000046523.6	novel	3998	2	NA	NA	-3054	-7755	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACGTCTTCATCCCTA	NA	False	NA	NA	False	NA	NA	NA	76189394	76195891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76193658_76194010_76194676_76194836
ES.11172.3	chr14	+	2914	3	NNC	ENSMUSG00000046523.6	novel	3998	2	NA	NA	-3	-7775	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76192445	76195871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76193660_76194010_76194676_76194836
ES.11172.4	chr14	+	2926	3	NNC	ENSMUSG00000046523.6	novel	3998	2	NA	NA	-3	-7755	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACGTCTTCATCCCTA	NA	False	NA	NA	False	NA	NA	NA	76192445	76195891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76193652_76194010_76194676_76194836
ES.11173.1	chr14	+	2522	1	Intergenic	novelGene_9303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGTGTAGTGGCCAACA	NA	False	NA	NA	False	NA	NA	NA	76235133	76237655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76235100_76237700
ES.11174.1	chr14	-	2769	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-43	-1259	-43	1259	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGACTGGTCTCTCGA	NA	False	NA	NA	False	AATAGA	-18	NA	76248348	76133117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.10	chr14	-	1287	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-43	223	-43	-223	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGCAAGCGTAAATGG	NA	False	NA	-1	True	ATTAAA	-23	NA	76248348	76134599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.11	chr14	-	1102	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-56	421	-56	-421	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAGACTAAACTCATG	NA	False	NA	8	True	CATAAA	-35	NA	76248361	76134797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.12	chr14	-	1086	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-59	-435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	207.983706626799	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGATGTTATTTAT	NA	False	NA	-6	True	AGTAAA	-45	NA	76248364	76134811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233020_76245144_76245219_76248119
ES.11174.13	chr14	-	175	1	Intergenic	novelGene_9302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGCGTTTATAAGA	NA	False	NA	NA	False	NA	NA	NA	76185922	76185747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76185700_76185900
ES.11174.2	chr14	-	2466	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-36	-963	-36	963	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATGCATGTATTCAT	NA	False	NA	NA	False	TTTAAA	-21	NA	76248341	76133413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.3	chr14	-	1515	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	-43	-5	-43	5	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACTGTTATCACTGG	NA	False	NA	-12	True	AATAAA	-24	NA	76248348	76134371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.4	chr14	-	1525	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-69	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	261.028521217297	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACTGTTATCACTGG	NA	False	NA	-12	True	AATAAA	-24	NA	76248374	76134371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186958_76232860_76233006_76245139_76245219_76248119
ES.11174.5	chr14	-	1520	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-41	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.983706626799	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACTGTTATCACTGG	NA	False	NA	-12	True	AATAAA	-24	NA	76248346	76134371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233032_76245144_76245219_76248119
ES.11174.6	chr14	-	1581	9	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-44	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	227.909213010356	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAACTGTTATCACTGG	NA	False	NA	-12	True	AATAAA	-24	NA	76248349	76134371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76216128_76216194_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ES.11174.7	chr14	-	1511	7	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	207.983706626799	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCAACTGTTATCACT	NA	False	NA	-14	True	AATAAA	-22	NA	76248351	76134373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233020_76245144_76245219_76248119
ES.11174.8	chr14	-	1719	8	NNC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	192.569626952149	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248359	76134376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234150_76234368_76245144_76245219_76248119
ES.11175.1	chr14	-	3929	1	Intergenic	novelGene_9304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAACACCTGAAATAAAA	NA	False	NA	NA	False	AAAACA	-6	NA	76293102	76289173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76289200_76293100
ES.11176.1	chr14	+	7305	2	Antisense	novelGene_ENSMUSG00000022008.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGACCAAGCATCAAGTG	NA	False	NA	NA	False	NA	NA	NA	76334484	76342230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_76336058_76336498
ES.11177.1	chr14	+	1693	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	-9	2290	-9	-2290	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTCTGTGTCATTGG	NA	False	NA	27	True	AATAAA	-23	NA	76348321	76372529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ES.11177.11	chr14	+	2206	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	29	1739	29	-1739	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGAATGATCCTGT	NA	False	NA	NA	False	NA	NA	NA	76348359	76373080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ES.11177.12	chr14	+	4380	5	ISM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	10147	2293	10147	-2293	3prime_fragment	FALSE	canonical	3	441	junction_2	41.2454542949887	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTGTGTCTGTGTCAT	NA	False	NA	24	True	AATAAA	-20	NA	76358477	76372526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ES.11177.2	chr14	+	1283	1	NIC	ENSMUSG00000022009.2	novel	3974	10	NA	NA	6	-25200	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTATAGGAAAAGAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	76348336	76349619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76348300_76349600
ES.11177.4	chr14	+	3251	9	ISM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	16	2294	16	-2294	intron_retention	FALSE	canonical	3	441	junction_7	37.976760986161	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTGTGTCTGTGTCA	NA	False	NA	23	True	AATAAA	-19	NA	76348346	76372525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411
ES.11177.5	chr14	+	4411	8	NIC	ENSMUSG00000022009.2	novel	3974	10	NA	NA	16	-2293	intron_retention	FALSE	canonical	3	441	junction_6	41.1120916718263	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTGTGTCTGTGTCAT	NA	False	NA	24	True	AATAAA	-20	NA	76348346	76372526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76348767_76349363_76349438_76351614_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76370639_76372225
ES.11177.6	chr14	+	2369	9	NIC	ENSMUSG00000022009.2	novel	3974	10	NA	NA	16	-2293	intron_retention	FALSE	canonical	3	441	junction_6	38.4569564578374	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTGTGTCTGTGTCAT	NA	False	NA	24	True	AATAAA	-20	NA	76348346	76372526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76348767_76349363_76349438_76351614_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ES.11177.7	chr14	+	5150	7	NIC	ENSMUSG00000022009.2	novel	3974	10	NA	NA	19	-2294	intron_retention	FALSE	canonical	3	441	junction_5	37.1158097491262	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGTGTGTCTGTGTCA	NA	False	NA	23	True	AATAAA	-19	NA	76348349	76372525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76348767_76349363_76349438_76351614_76353301_76361925_76362019_76363577_76363772_76368252_76370639_76372225
ES.11177.9	chr14	+	4207	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	20	-253	20	253	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGCTTCTGCTATGAC	NA	False	NA	NA	False	AATAAA	-33	NA	76348350	76375072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ES.11178.1	chr14	-	5729	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-325	-15	-325	15	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTTTCTTTGT	NA	False	NA	6	True	AATAAA	-32	NA	76348525	76323660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.10	chr14	-	2207	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-44	3226	-44	-3226	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCATTGTGTCAGGCTGT	NA	False	NA	NA	False	AATATA	-15	NA	76348244	76326901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.11	chr14	-	2052	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-43	3380	-43	-3380	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCATGTAATTATTT	NA	False	NA	NA	False	NA	NA	NA	76348243	76327055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.12	chr14	-	1875	7	NNC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-64	-3465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.2427440864184	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTCTGTATCCTTTA	NA	False	NA	NA	False	TATAAA	-4	NA	76348264	76327140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336625_76343493_76343593_76344760_76344894_76348056
ES.11178.13	chr14	-	1282	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-64	4171	-64	-4171	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTATAAATTGTGA	NA	False	NA	32	True	TATAAA	-15	NA	76348264	76327846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.14	chr14	-	1095	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-41	4335	-41	-4335	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCCGGTTTTCACATG	NA	False	NA	NA	False	AATAAA	-16	NA	76348241	76328010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.2	chr14	-	3766	9	NNC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7197872870612	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTTGGAATCTTCCT	NA	False	NA	-11	True	AATAAA	-15	NA	76348233	76323677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76326314_76327967_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.3	chr14	-	5561	9	NNC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	55.2900024868873	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTTGGAATCTTCCT	NA	False	NA	-11	True	AATAAA	-15	NA	76348235	76323677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76342490_76342630_76343493_76343593_76344760_76344894_76348056
ES.11178.4	chr14	-	5395	8	NNC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.0392801555362	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTTGGAATCTTCCT	NA	False	NA	-11	True	AATAAA	-15	NA	76348236	76323677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339913_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.5	chr14	-	4118	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-66	1337	-66	-1337	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCCTTGCTTTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	76348266	76325012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.6	chr14	-	3942	7	NIC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-37	-1378	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	50.2427440864184	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATCTTAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	76348237	76325053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76343493_76343593_76344760_76344894_76348056
ES.11178.7	chr14	-	3424	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-64	2029	-64	-2029	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGACTAGCATGGTCA	NA	False	NA	NA	False	TATAAA	-19	NA	76348264	76325704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.8	chr14	-	3286	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	-56	2159	-56	-2159	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCTTCTTAAAACCTG	NA	False	NA	NA	False	TATAAA	-16	NA	76348256	76325834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ES.11178.9	chr14	-	3185	7	NIC	ENSMUSG00000022008.5	novel	5389	8	NA	NA	-64	-2162	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	50.2427440864184	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGCTGCTTCTTAAAAC	NA	False	NA	NA	False	TATAAA	-13	NA	76348264	76325837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76343493_76343593_76344760_76344894_76348056
ES.11179.1	chr14	-	5001	2	Antisense	novelGene_ENSMUSG00000022009.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAGGGGAGAGA	NA	False	NA	NA	False	AAAAAG	-22	NA	76370186	76360894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_76361003_76365293
ES.1118.1	chr1	-	6808	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-43	-6	-28	2	multi-exon	TRUE	canonical	3	42	junction_6	10.8119789534057	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATAAGACATTTT	NA	False	NA	1	True	AATAAA	-21	NA	105591430	105446144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.10	chr1	-	5555	32	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.4035945048498	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTTTCTTGTGATAA	NA	False	NA	-7	True	AATAAA	-13	NA	105591379	105446152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105448312_105449507_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519489_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.11	chr1	-	6741	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	15.9861398300736	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTTTCTTGTGATAA	NA	False	NA	-7	True	AATAAA	-13	NA	105591370	105446152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565284_105565899_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.12	chr1	-	6797	32	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.6378134629933	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTTTCTTGTGATAA	NA	False	NA	-7	True	AATAAA	-13	NA	105591376	105446152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515754_105516773_105516867_105516950_105517051_105519346_105519487_105525397_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575511_105575611_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.13	chr1	-	6715	31	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	15.7841340873958	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGGTTTTCTTGTGAT	NA	False	NA	-9	True	AATAAA	-11	NA	105591376	105446154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586640_105586732_105587017_105587092_105591224
ES.1118.16	chr1	-	6622	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	-148	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	15.9861398300736	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTAAAGTGTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	105591396	105446298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565283_105565897_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.17	chr1	-	6483	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	8	-148	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTAAAGTGTGTTCAT	NA	False	NA	NA	False	NA	NA	NA	105591379	105446298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.19	chr1	-	6306	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	-346	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAGAAGGTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-45	NA	105591400	105446496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.2	chr1	-	6493	30	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	16.1886911688317	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTGATAAGACATT	NA	False	NA	-1	True	AATAAA	-19	NA	105591392	105446146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585421_105587017_105587092_105591224
ES.1118.20	chr1	-	6403	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-11	367	0	-367	multi-exon	FALSE	canonical	3	42	junction_6	10.8119789534057	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTAGGAAACATC	NA	False	NA	NA	False	AATAAA	-24	NA	105591398	105446517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.22	chr1	-	6117	30	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	-376	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	16.1886911688317	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGATGAAGTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	105591396	105446526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585421_105587017_105587092_105591224
ES.1118.24	chr1	-	6086	30	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	14	-509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	18.2150582542496	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTAATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	105591354	105446659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574529_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.25	chr1	-	6244	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	7	-509	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.1103976487628	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTAATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	105591380	105446659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105478970_105479092_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.26	chr1	-	6259	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-9	509	1	-509	multi-exon	FALSE	canonical	3	42	junction_6	10.8119789534057	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTAATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	105591396	105446659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.27	chr1	-	6141	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	0	-509	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTAATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	105591398	105446659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.28	chr1	-	5629	23	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	6	-510	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.2222348114531	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCACTAATTTTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	105591362	105446660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.29	chr1	-	6275	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-2	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.0111308554145	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCACTAATTTTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	105591389	105446660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105478970_105479092_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105516773_105516867_105516950_105517051_105519346_105519487_105525397_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.31	chr1	-	5063	32	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	0	-511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.4881430907059	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCACTAATTTTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	105591401	105446661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105448312_105449511_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575832_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.32	chr1	-	3962	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	0	19	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAGCTAGACCAAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	105591402	105448842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.33	chr1	-	6994	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	16.1216210930125	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTCTTTTGTCTTGATA	NA	False	NA	NA	False	AATAAA	-4	NA	105591386	105448860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105509202_105511213_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.34	chr1	-	4055	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	-9	2713	1	-2	multi-exon	FALSE	canonical	3	42	junction_6	10.8119789534057	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTACTCTTTTGTCTTG	NA	False	NA	NA	False	AATAAA	-1	NA	105591396	105448863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.35	chr1	-	8406	6	ISM	ENSMUSG00000056536.15	ENSMUST00000190139.2	1967	10	-3617	29851	-3617	1633	intron_retention	FALSE	canonical	3	42	junction_3	7.98498591107085	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAACAATAACTTAT	NA	False	NA	NA	False	NA	NA	NA	105500507	105478721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872
ES.1118.36	chr1	-	3915	1	NIC	ENSMUSG00000056536.15	novel	6528	29	NA	NA	14033	1629	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAACAATAAC	NA	False	NA	NA	False	NA	NA	NA	105482640	105478725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105478700_105482600
ES.1118.37	chr1	-	5070	26	NNC	ENSMUSG00000056536.15	novel	4006	26	NA	NA	0	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.6417160112189	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCAATACTAGAATA	NA	False	NA	NA	False	AATAAA	-18	NA	105591401	105480587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105481625_105485187_105485275_105485712_105485816_105493872_105493976_105494541_105495926_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.38	chr1	-	2903	26	FSM	ENSMUSG00000056536.15	ENSMUST00000187537.7	4006	26	3	1100	3	-1100	multi-exon	FALSE	canonical	1	1	junction_1	16.138599691423	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGCCACTCTGTTCTT	NA	False	NA	NA	False	GATAAA	-32	NA	105591365	105481454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105481625_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.39	chr1	-	3609	26	NNC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	3	661	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	15.9749804381727	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCAATGAGCCATTAG	NA	False	NA	NA	False	AGTAAA	-16	NA	105591384	105483869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105484727_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.4	chr1	-	6654	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTGATAAGACATT	NA	False	NA	-1	True	AATAAA	-19	NA	105591398	105446146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.40	chr1	-	2940	26	NNC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	15.9749804381727	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTATAACTTGTTGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	105591375	105484529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105484727_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.41	chr1	-	3039	26	NNC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.302932251592	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTATAACTTGTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	105591425	105484530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105484777_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.42	chr1	-	2807	25	NNC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0246550560056	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTATAACTTGTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	105591370	105484530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105484720_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.43	chr1	-	9954	1	FSM	ENSMUSG00000100672.2	ENSMUST00000190242.2	453	1	-7326	-2175	-7326	2175	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105499629	105489675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_105489700_105499600
ES.1118.44	chr1	-	3024	22	NIC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	4	-8769	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	13.8526420443891	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGCATCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	105591393	105493299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.45	chr1	-	3887	23	NNC	ENSMUSG00000056536.15	novel	1362	10	NA	NA	28	-19729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2222348114531	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGAAATATTGGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	105591340	105504259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105505732_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.46	chr1	-	3630	23	NNC	ENSMUSG00000056536.15	novel	1362	10	NA	NA	-8	-20022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2222348114531	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTACTTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	105591376	105504552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105505732_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.47	chr1	-	6089	21	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	17	24430	-2	-24430	5prime_fragment	FALSE	canonical	3	50	junction_5	9.35735005223167	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCGA	NA	False	NA	NA	False	NA	NA	NA	105591370	105508960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.48	chr1	-	4464	20	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	-19	28973	-4	-28973	5prime_fragment	FALSE	canonical	3	50	junction_4	9.5028789922462	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGGATTTGTACTTTC	NA	False	NA	NA	False	AATAAA	-36	NA	105591406	105513503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.49	chr1	-	4147	16	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	-9	38543	1	32979	5prime_fragment	FALSE	canonical	3	56	junction_13	8.37827879433214	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTCCTGGTGTGAGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	105591396	105523073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.5	chr1	-	6656	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	16.4035030045552	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTGTGATAAGACAT	NA	False	NA	-2	True	AATAAA	-18	NA	105591373	105446147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.50	chr1	-	4023	16	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	7	38651	7	32871	5prime_fragment	FALSE	canonical	3	56	junction_13	8.37827879433214	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCCATGATTTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	105591380	105523181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.51	chr1	-	176	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	105548827	105548651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_105548700_105548800
ES.1118.52	chr1	-	6927	15	NNC	ENSMUSG00000056536.15	novel	1362	10	NA	NA	1	-3160	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.3175052702876	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCTGCTTCTTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	105591386	105559212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105564584_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.53	chr1	-	1557	14	NNC	ENSMUSG00000056536.15	novel	1362	10	NA	NA	1	-8420	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.4944142889955	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAACCAGAAAAGTTTG	NA	False	NA	NA	False	TATAAA	-14	NA	105591396	105564472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105564584_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.54	chr1	-	1494	13	ISM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	14	81370	-5	8453	5prime_fragment	FALSE	canonical	3	56	junction_10	9.23610066833161	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAAATGAACTATAC	NA	False	NA	NA	False	NA	NA	NA	105591373	105565900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.55	chr1	-	2633	9	NIC	ENSMUSG00000056536.15	novel	3015	26	NA	NA	-5	-23	intron_retention	FALSE	canonical	3	56	junction_6	10.2095237401164	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACTAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	105591373	105574376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.56	chr1	-	1242	9	NIC	ENSMUSG00000056536.15	novel	1362	10	NA	NA	1	-23	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	20.2079037755033	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACTAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	105591396	105574376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.1118.57	chr1	-	159	1	ISM	ENSMUSG00000056536.15	ENSMUST00000187909.2	996	3	4857	399	192	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	105586541	105586382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_105586400_105586500
ES.1118.6	chr1	-	6551	31	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.7951733735496	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTGTGATAAGACAT	NA	False	NA	-2	True	AATAAA	-18	NA	105591373	105446147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481823_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585421_105586611_105586732_105587017_105587092_105591224
ES.1118.7	chr1	-	3895	33	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.228859129899	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCTTGTGATAAGA	NA	False	NA	-5	True	AATAAA	-15	NA	105591373	105446150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105446535_105448188_105448312_105449507_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ES.1118.8	chr1	-	6611	30	NNC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.2616487940888	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCTTGTGATAAGA	NA	False	NA	-5	True	AATAAA	-15	NA	105591390	105446150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519461_105525392_105525576_105526773_105526853_105564479_105564584_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
ES.11180.1	chr14	+	168	1	Intergenic	novelGene_9305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	76375688	76375856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76375700_76375900
ES.11181.1	chr14	-	176	1	Intergenic	novelGene_9306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTAGG	NA	False	NA	NA	False	NA	NA	NA	76379691	76379515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76379500_76379700
ES.11182.1	chr14	-	159	1	Intergenic	novelGene_9307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	76422295	76422136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76422100_76422300
ES.11183.1	chr14	-	609	1	FSM	ENSMUSG00000095427.3	ENSMUST00000095471.6	855	1	290	-44	290	44	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	76474695	76474086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76474100_76474700
ES.11184.1	chr14	+	155	1	Intergenic	novelGene_9308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	549	False	NA	NA	False	NA	NA	NA	76479850	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76479800_76480000
ES.11185.1	chr14	+	125	1	Intergenic	novelGene_9309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGTAAATAAATAGATAAA	NA	False	NA	NA	False	NA	NA	NA	76627349	76627474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76627300_76627500
ES.11186.1	chr14	-	4610	1	Intergenic	novelGene_9310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAAACAAA	NA	False	NA	NA	False	AGTAAA	-33	NA	76650406	76645796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76645800_76650400
ES.11187.1	chr14	+	6252	4	NNC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	-999	1	intron_retention	FALSE	canonical	0	0	junction_1	1081.92000115022	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTTTCTATATGACGCC	5739	False	NA	32	True	AATAAA	-22	NA	76651401	76745206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76653158_76653352_76656450_76742688_76742738_76743856
ES.11187.11	chr14	+	5685	4	NIC	ENSMUSG00000022010.20	novel	917	3	NA	NA	-1	-12	intron_retention	FALSE	canonical	1	1	junction_2	7.11805216802087	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTTACTGATAAATGGC	6737	False	NA	NA	False	AATAAA	-21	NA	76652399	76679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76653158_76653356_76656450_76676375_76676549_76677395
ES.11187.12	chr14	+	5503	5	NNC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	17	-18	intron_retention	FALSE	canonical	0	0	junction_2	1.29903810567666	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCACTTACTGATA	6755	False	NA	NA	False	AATAAA	-15	NA	76652417	76679050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76653158_76653315_76654430_76654675_76656450_76676375_76676549_76677348
ES.11187.13	chr14	+	6033	4	NNC	ENSMUSG00000022010.20	novel	2278	5	NA	NA	47	-12	intron_retention	FALSE	canonical	1	2	junction_1	7.31816613336672	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTTACTGATAAATGGC	6785	False	NA	NA	False	AATAAA	-21	NA	76652447	76679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76656450_76675105_76675256_76676375_76676549_76677348
ES.11187.14	chr14	+	5149	4	NNC	ENSMUSG00000022010.20	novel	2278	5	NA	NA	-84	-18	intron_retention	FALSE	canonical	1	2	junction_2	6.84754619472471	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCACTTACTGATA	7280	False	NA	NA	False	AATAAA	-15	NA	76652942	76679050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76653158_76653315_76656450_76676403_76676549_76677395
ES.11187.16	chr14	+	4715	3	NNC	ENSMUSG00000022010.20	novel	917	3	NA	NA	35	-11	intron_retention	FALSE	canonical	1	2	junction_1	0.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTACTGATAAATGGCT	7926	False	NA	NA	False	AATAAA	-22	NA	76653588	76679057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76656450_76676403_76676549_76677348
ES.11187.17	chr14	+	4755	4	NIC	ENSMUSG00000022010.20	novel	2278	5	NA	NA	120	-17	intron_retention	FALSE	canonical	1	2	junction_1	7.31816613336672	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCACTTACTGATAA	8011	False	NA	NA	False	AATAAA	-16	NA	76653673	76679051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76656450_76675105_76675256_76676375_76676549_76677395
ES.11187.18	chr14	+	1937	2	NNC	ENSMUSG00000022010.20	novel	4818	3	NA	NA	1065	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACACACGTGTTTCTATA	8956	False	NA	25	True	AATAAA	-15	NA	76654618	76745199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76655500_76744143
ES.11187.19	chr14	+	2535	1	NIC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	-662	3583	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTTTATAAAGAGAAAAC	9469	False	NA	NA	False	NA	NA	NA	76655131	76657666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76655100_76657700
ES.11187.2	chr14	+	4810	5	NNC	ENSMUSG00000022010.20	novel	2278	5	NA	NA	-963	-8	intron_retention	FALSE	canonical	0	0	junction_1	1.29903810567666	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGATAAATGGCTTAT	5775	False	NA	NA	False	AATAAA	-25	NA	76651437	76679060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76651540_76653352_76654430_76654675_76656450_76676403_76676549_76677348
ES.11187.20	chr14	+	3075	3	NNC	ENSMUSG00000022010.20	novel	603	2	NA	NA	6815	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCACTTACTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	76663082	76679050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76664330_76676375_76676549_76677395
ES.11187.21	chr14	+	6423	2	FSM	ENSMUSG00000022010.20	ENSMUST00000175655.2	603	2	-4586	-1234	-3419	-12	multi-exon	FALSE	canonical	3	17	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTTACTGATAAATGGC	124	False	NA	NA	False	AATAAA	-21	NA	76671786	76679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76676549_76677395
ES.11187.22	chr14	+	6621	1	NIC	ENSMUSG00000022010.20	novel	2278	5	NA	NA	-2766	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGATAAATGGCTTAT	777	False	NA	NA	False	AATAAA	-25	NA	76672439	76679060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76672400_76679100
ES.11187.23	chr14	+	2998	3	NNC	ENSMUSG00000022010.20	novel	650	3	NA	NA	-1067	-12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	7.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTTACTGATAAATGGC	2476	False	NA	NA	False	AATAAA	-21	NA	76674138	76679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76675256_76676375_76676549_76677348
ES.11187.24	chr14	+	1956	3	NNC	ENSMUSG00000022010.20	novel	786	2	NA	NA	1951	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.5	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	NA	False	NA	28	True	AATAAA	-18	NA	76716307	76745202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76716869_76742688_76742738_76743856
ES.11187.25	chr14	+	2123	3	NNC	ENSMUSG00000022010.20	novel	786	2	NA	NA	3055	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.5	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACACACGTGTTTCTATA	NA	False	NA	25	True	AATAAA	-15	NA	76717411	76745199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76718143_76742688_76742738_76743856
ES.11187.26	chr14	+	1597	3	FSM	ENSMUSG00000022010.20	ENSMUST00000142683.8	797	3	-36	-764	-36	0	multi-exon	FALSE	canonical	3	75	junction_1	1130	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	3067	False	NA	28	True	AATAAA	-18	NA	76725162	76745202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76725365_76742688_76742738_76743856
ES.11187.27	chr14	+	1546	3	FSM	ENSMUSG00000022010.20	ENSMUST00000101618.9	1043	3	89	-592	89	0	multi-exon	FALSE	canonical	2	49	junction_1	1143	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	3869	False	NA	28	True	AATAAA	-18	NA	76725964	76745202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76726116_76742688_76742738_76743856
ES.11187.28	chr14	+	1493	3	FSM	ENSMUSG00000022010.20	ENSMUST00000177207.2	1476	3	-16	-1	-16	1	multi-exon	FALSE	canonical	3	21	junction_1	1157	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGTTTCTATATGACG	6259	False	NA	30	True	AATAAA	-20	NA	76741637	76745204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76741734_76742688_76742738_76743856
ES.11187.29	chr14	+	1993	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	-208	-23	56	23	multi-exon	FALSE	canonical	3	2255	junction_1	40	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACATTCATTTCCACAG	6331	False	NA	54	True	AATAAA	-44	NA	76741709	76745228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76742282_76742688_76742738_76743856
ES.11187.3	chr14	+	6078	5	NNC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	-960	-3	intron_retention	FALSE	canonical	0	0	junction_1	999.357043303343	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACACACGTGTTTCTATA	5778	False	NA	25	True	AATAAA	-15	NA	76651440	76745199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76651540_76651704_76653158_76653315_76656450_76742688_76742738_76743856
ES.11187.30	chr14	+	2130	2	FSM	ENSMUSG00000022010.20	ENSMUST00000133224.2	786	2	-584	-760	-16	0	multi-exon	FALSE	canonical	3	2335	junction_1	0	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6575	False	NA	28	True	AATAAA	-18	NA	76741953	76745202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76742738_76743856
ES.11187.32	chr14	+	862	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	38	862	-14	-27	multi-exon	FALSE	canonical	3	2255	junction_1	40	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGATGTGCCCTGTGC	6577	False	NA	11	True	ATTAAA	-17	NA	76741955	76744343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76742282_76742688_76742738_76743856
ES.11187.33	chr14	+	1380	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	38	344	-14	251	multi-exon	FALSE	canonical	3	2255	junction_1	40	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAAAGGTGTGGCTT	6577	False	NA	NA	False	NA	NA	NA	76741955	76744861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76742282_76742688_76742738_76743856
ES.11187.34	chr14	+	1712	2	NNC	ENSMUSG00000022010.20	novel	801	2	NA	NA	488	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACGTGTTTCTATAT	7647	False	NA	26	True	AATAAA	-16	NA	76743025	76745200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76743394_76743856
ES.11187.35	chr14	+	1782	1	NIC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1007	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	8042	False	NA	28	True	AATAAA	-18	NA	76743420	76745202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76743400_76745200
ES.11187.4	chr14	+	1925	3	NNC	ENSMUSG00000022010.20	novel	603	2	NA	NA	-958	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCACTTACTGATA	5780	False	NA	NA	False	AATAAA	-15	NA	76651442	76679050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76651540_76676375_76676549_76677395
ES.11187.5	chr14	+	6045	3	NIC	ENSMUSG00000022010.20	novel	917	3	NA	NA	-186	-8	intron_retention	FALSE	canonical	1	2	junction_1	7.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTGATAAATGGCTTAT	6552	False	NA	NA	False	AATAAA	-25	NA	76652214	76679060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_76656450_76676403_76676549_76677395
ES.11187.6	chr14	+	6060	3	FSM	ENSMUSG00000022010.20	ENSMUST00000175984.2	917	3	-3866	-1277	-176	-11	multi-exon	FALSE	canonical	1	1	junction_1	8	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTACTGATAAATGGCT	6562	False	NA	NA	False	AATAAA	-22	NA	76652224	76679057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76656450_76676375_76676549_76677395
ES.11187.7	chr14	+	5603	3	FSM	ENSMUSG00000022010.20	ENSMUST00000048371.15	4818	3	-781	-4	-155	1	multi-exon	FALSE	canonical	3	82	junction_1	1126.5	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTTTCTATATGACGCC	6583	False	NA	32	True	AATAAA	-22	NA	76652245	76745206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_76656450_76742688_76742738_76743856
ES.11187.9	chr14	+	5739	4	NNC	ENSMUSG00000022010.20	novel	917	3	NA	NA	-4	-12	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTTACTGATAAATGGC	6734	False	NA	NA	False	AATAAA	-21	NA	76652396	76679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76653158_76653352_76656450_76676375_76676549_76677348
ES.11188.1	chr14	-	3340	1	Intergenic	novelGene_9311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGTAGAAAAAACAAGGCT	1370	False	NA	NA	False	NA	NA	NA	76672484	76669144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76669100_76672500
ES.11188.2	chr14	-	5606	1	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGTCCTCAAATTTA	NA	False	NA	NA	False	NA	NA	NA	76676605	76670999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_76671000_76676600
ES.11189.1	chr14	-	1802	3	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGATACTTACAGTGGG	NA	False	NA	NA	False	ACTAAA	-19	NA	76732489	76689343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_76690955_76706434_76706535_76732398
ES.11189.2	chr14	-	2438	1	Intergenic	novelGene_9312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	76702053	76699615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76699600_76702100
ES.11189.3	chr14	-	455	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAATGGACTCGGAGA	NA	False	NA	NA	False	NA	NA	NA	76732446	76708764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_76709172_76732398
ES.11189.4	chr14	-	175	1	Intergenic	novelGene_9313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGAAGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	76711932	76711757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76711800_76711900
ES.11189.5	chr14	-	1834	1	Intergenic	novelGene_9314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAACAAAAATTACTT	NA	False	NA	NA	False	ATTAAA	-25	NA	76721079	76719245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76719200_76721100
ES.11189.6	chr14	-	1714	2	Antisense	novelGene_ENSMUSG00000022010.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGGCTTCTGCTTAAG	NA	False	NA	NA	False	NA	NA	NA	76732570	76719613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_76721156_76732398
ES.1119.1	chr1	+	953	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	-77	-2	-1	2	multi-exon	FALSE	canonical	3	51	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTGCTTCATAGAAT	NA	False	NA	13	True	AATAAA	-15	NA	105591584	105592877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105592359_105592698
ES.1119.10	chr1	+	4961	5	ISM	ENSMUSG00000026319.14	ENSMUST00000191293.7	5109	22	-572	47238	8	4118	5prime_fragment	FALSE	canonical	3	95	junction_1	9.12071817347735	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACATCTTATTAACGG	NA	False	NA	NA	False	NA	NA	NA	105591593	105618984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006
ES.1119.11	chr1	+	5445	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACATTTTAGAAATCT	NA	False	NA	84	True	AATAAA	-14	NA	105591593	105682912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.12	chr1	+	4961	30	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	10	-66	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26.7922824176339	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	105591595	105682845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105591709_105592132_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.13	chr1	+	5313	28	NIC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	28.7172011276093	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTAGAAATCTAATC	NA	False	NA	88	True	AATAAA	-18	NA	105591597	105682916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.16	chr1	+	5433	29	FSM	ENSMUSG00000026319.14	ENSMUST00000186807.7	4338	29	24	-1119	2	0	multi-exon	FALSE	canonical	1	1	junction_6	37.2331834386961	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTAGAAATCTAATC	NA	False	NA	88	True	AATAAA	-18	NA	105591609	105682916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.17	chr1	+	5319	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	6	-65	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.2922746721159	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591613	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619679_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.18	chr1	+	4310	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAGAATAATGCAGACT	NA	False	NA	NA	False	AATAAA	-28	NA	105591613	105681797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.19	chr1	+	5230	30	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	6	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.4071930648471	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTGTGTATTTTGT	NA	False	NA	15	True	AATAAA	-15	NA	105591613	105682843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592006_105592091_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619679_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.2	chr1	+	5470	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	-22	-1120	0	4	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAAATCTAATCTCTA	NA	False	NA	92	True	AATAAA	-22	NA	105591585	105682920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.20	chr1	+	5326	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	6	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.2128164174384	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591613	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646541_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.21	chr1	+	4949	26	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	6	-5184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	31.9393425104525	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCACTGCTGTGTGTCTTG	NA	False	NA	NA	False	TATAAA	-5	NA	105591613	105673530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105672044
ES.1119.23	chr1	+	4489	26	NIC	ENSMUSG00000026319.14	novel	3852	28	NA	NA	9	-65	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.0719032845382	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591616	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105591709_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.24	chr1	+	5357	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	9	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	34.1554631540154	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTGTGTATTTTGT	NA	False	NA	15	True	AATAAA	-15	NA	105591616	105682843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658937_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673786_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.25	chr1	+	4711	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	9	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	34.0965578189653	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTGTATTTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	105591616	105682844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105591709_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671073_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.26	chr1	+	5299	30	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	9	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	27.9974094266178	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	105591616	105682845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227_105682016_105682080
ES.1119.28	chr1	+	3054	6	NNC	ENSMUSG00000026319.14	novel	5109	22	NA	NA	10	4118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.6687531308143	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACATCTTATTAACGG	NA	False	NA	NA	False	NA	NA	NA	105591617	105618984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615804_105617686
ES.1119.29	chr1	+	5341	28	NNC	ENSMUSG00000026319.14	novel	3852	28	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	34.1862886543946	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACATTTTAGAAATCT	NA	False	NA	84	True	AATAAA	-14	NA	105591625	105682912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.3	chr1	+	5470	30	NNC	ENSMUSG00000026319.14	novel	5414	29	NA	NA	2	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.449701594651	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	105591587	105682845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614670_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.30	chr1	+	4481	19	ISM	ENSMUSG00000026319.14	ENSMUST00000191293.7	5109	22	-538	8913	-10	-4996	5prime_fragment	FALSE	canonical	3	86	junction_7	10.7186234605424	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCTTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	105591627	105657309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664
ES.1119.31	chr1	+	5373	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-9	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.4910476451528	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	NA	False	NA	17	True	AATAAA	-17	NA	105591628	105682845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648971_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.32	chr1	+	4228	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	28.3452430951377	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAAGAATAATGCAGAC	NA	False	NA	NA	False	AATAAA	-27	NA	105591631	105681796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646569_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.33	chr1	+	5297	28	NIC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-3	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	28.7260844646361	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAAATCTAATCTCTA	NA	False	NA	92	True	AATAAA	-22	NA	105591634	105682920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.34	chr1	+	5290	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-3	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.4910476451528	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591634	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105649049_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.36	chr1	+	9491	27	NIC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	-2	0	intron_retention	FALSE	canonical	3	86	junction_7	19.5734468728736	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATAATGCAGACTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	105591635	105681800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.38	chr1	+	5123	27	NIC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	1	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	35.7870923145673	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTGTGTATTTTG	NA	False	NA	14	True	AATAAA	-14	NA	105591638	105682842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.39	chr1	+	5422	30	NIC	ENSMUSG00000026319.14	novel	5414	29	NA	NA	1	-69	combination_of_known_junctions	FALSE	canonical	3	15	junction_24	31.2103827353577	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTGTGTATTTTG	NA	False	NA	14	True	AATAAA	-14	NA	105591638	105682842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.40	chr1	+	6129	28	NIC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	4	-55	intron_retention	FALSE	canonical	3	86	junction_7	19.249570212365	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTCACTTTGAAT	NA	False	NA	28	True	AATAAA	-28	NA	105591641	105682856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.41	chr1	+	9745	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	169	-69	intron_retention	FALSE	canonical	0	0	junction_2	35.0932249697219	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTGTGTATTTTG	NA	False	NA	14	True	AATAAA	-14	NA	105591830	105682842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592359_105605887_105605978_105610650_105610739_105614673_105614746_105614854_105614911_105615006_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.43	chr1	+	3649	2	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105615121	105618965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_105617532_105617726
ES.1119.44	chr1	+	4710	22	NNC	ENSMUSG00000026319.14	novel	3852	28	NA	NA	-4360	0	intron_retention	FALSE	canonical	3	12	junction_12	29.9692207941971	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTAGAAATCTAATC	NA	False	NA	88	True	AATAAA	-18	NA	105619954	105682916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.45	chr1	+	3325	17	ISM	ENSMUSG00000026319.14	ENSMUST00000185692.7	3720	21	20185	68	13016	-68	3prime_fragment	FALSE	canonical	3	90	junction_1	20.3377727394127	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTGTGTATTTTGT	NA	False	NA	15	True	AATAAA	-15	NA	105644499	105682843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.46	chr1	+	308	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGTCTCAATTTCT	NA	False	NA	NA	False	AAGAAA	-10	NA	105646765	105647073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_105646800_105647100
ES.1119.47	chr1	+	157	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATTTTTGG	NA	False	NA	NA	False	NA	NA	NA	105658352	105658509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_105658400_105658500
ES.1119.48	chr1	+	4339	7	FSM	ENSMUSG00000026319.14	ENSMUST00000190459.7	809	7	-1935	-1595	-1935	-66	multi-exon	FALSE	canonical	3	120	junction_1	14.8735410115487	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTGTATTTTGTTT	2107	False	NA	17	True	AATAAA	-17	NA	105666001	105682845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.49	chr1	+	4746	6	NIC	ENSMUSG00000026319.14	novel	809	7	NA	NA	-1485	7	intron_retention	FALSE	canonical	3	134	junction_4	11.61034021896	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATCTAATCTCTATAA	2557	False	NA	95	True	AATAAA	-25	NA	105666451	105682923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.5	chr1	+	5466	29	FSM	ENSMUSG00000026319.14	ENSMUST00000086721.10	5414	29	-50	-2	2	2	multi-exon	FALSE	canonical	2	6	junction_22	32.829491470385	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAGAAATCTAATCTC	NA	False	NA	90	True	AATAAA	-20	NA	105591587	105682918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.50	chr1	+	5567	1	NIC	ENSMUSG00000026319.14	novel	5414	29	NA	NA	8571	-69	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTGTGTATTTTG	1623	False	NA	14	True	AATAAA	-14	NA	105677275	105682842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105677300_105682800
ES.1119.6	chr1	+	4351	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	-20	-3	2	3	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGCAGACTTTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	105591587	105681803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.7	chr1	+	4661	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	2	-67	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	39.0101210048921	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTGTATTTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	105591587	105682844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105591709_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646569_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.8	chr1	+	5990	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	2	-65	intron_retention	FALSE	canonical	1	1	junction_1	28.2986983186614	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591587	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105591709_105591891_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.1119.9	chr1	+	5402	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	2	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.7897724835459	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTATTTTGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	105591587	105682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105592376_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ES.11190.1	chr14	+	2957	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10679	2	intron_retention	FALSE	canonical	2	3	junction_2	7.48331477354788	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGCCACCCTCCTG	NA	False	NA	8	True	AATAAA	-24	NA	76753352	76768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032_76764102_76764243_76766669_76767910
ES.11190.10	chr14	+	2058	3	Intergenic	novelGene_9317	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGAGTGTTTTGCCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	76761142	76763324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76762573_76762660_76763062_76763097
ES.11190.11	chr14	+	6234	1	Genic_Genomic	ENSMUSG00000115092.2	novel	NA	NA	NA	NA	-592	1487	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAATTAAATAACTACC	NA	False	NA	NA	False	NA	NA	NA	76763439	76769673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_76763400_76769700
ES.11190.2	chr14	+	4339	2	NNC	ENSMUSG00000115092.2	novel	3733	2	NA	NA	-10677	2	intron_retention	FALSE	canonical	3	21	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGCCACCCTCCTG	NA	False	NA	8	True	AATAAA	-24	NA	76753354	76768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032
ES.11190.3	chr14	+	4565	2	NNC	ENSMUSG00000115092.2	novel	3733	2	NA	NA	-10676	229	intron_retention	FALSE	canonical	3	21	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGGAGTTCAGTTTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	76753355	76768415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032
ES.11190.4	chr14	+	4142	3	NNC	ENSMUSG00000115092.2	novel	3733	2	NA	NA	-10646	229	intron_retention	FALSE	canonical	0	0	junction_2	10.5	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGGAGTTCAGTTTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	76753385	76768415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032_76764413_76764805
ES.11190.5	chr14	+	2622	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.60232526704263	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCATAAAAACACGCCACC	NA	False	NA	2	True	AATAAA	-18	NA	76753425	76768182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032_76764408_76764805_76766669_76767910
ES.11190.6	chr14	+	3385	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	1487	intron_retention	FALSE	canonical	2	12	junction_2	4.5	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAATTAAATAACTACC	NA	False	NA	NA	False	NA	NA	NA	76753425	76769673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032_76764202_76766569
ES.11190.7	chr14	+	1524	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	228	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATGGAGTTCAGTTTA	NA	False	NA	NA	False	AGTAAA	-14	NA	76753425	76768414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76766569_76766669_76767101
ES.11190.8	chr14	+	630	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10598	2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	4.24264068711928	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGCCACCCTCCTG	NA	False	NA	8	True	AATAAA	-24	NA	76753433	76768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767930
ES.11190.9	chr14	+	1275	3	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10583	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGCCACCCTCCTG	NA	False	NA	8	True	AATAAA	-24	NA	76753448	76768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_76753538_76766569_76766669_76767101
ES.11191.1	chr14	-	974	2	Intergenic	novelGene_9315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTTGGCTAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	76752939	76751832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76752575_76752707
ES.11191.2	chr14	-	1644	3	Intergenic	novelGene_9316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATAAACTTTATTTCTT	NA	False	NA	-19	True	NA	NA	NA	76755629	76752001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76752575_76753317_76754112_76755352
ES.11192.1	chr14	-	5333	1	Genic_Genomic	ENSMUSG00000052584.11	novel	NA	NA	NA	NA	23424	5078	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTGTGCCAGATACT	NA	False	NA	NA	False	AATAAA	-17	NA	76770508	76765175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_76765200_76770500
ES.11192.3	chr14	-	7528	4	NIC	ENSMUSG00000052584.11	novel	865	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	14	junction_1	8.04155872120988	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	-2	True	AATAAA	-18	NA	76794300	76770253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_76777495_76787421_76787495_76793870_76793989_76794204
ES.11192.4	chr14	-	911	5	FSM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	-44	-2	-13	0	multi-exon	FALSE	canonical	3	14	junction_2	35.7587401903367	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	-2	True	AATAAA	-18	NA	76794342	76770253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870_76793989_76794204
ES.11192.6	chr14	-	745	4	NIC	ENSMUSG00000052584.11	novel	865	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	9.8770215933527	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	-2	True	AATAAA	-18	NA	76794325	76770253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_76770687_76787421_76787495_76793870_76793989_76794204
ES.11192.8	chr14	-	917	3	FSM	ENSMUSG00000052584.11	ENSMUST00000227957.2	620	3	-195	-102	-15	102	multi-exon	FALSE	canonical	3	14	junction_1	7	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAGCAGAGTCCCAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	76794127	76776907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_76777495_76787421_76787495_76793870
ES.11193.1	chr14	-	1244	6	Intergenic	novelGene_9318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	2.33238075793812	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGGCTCTGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	76867662	76844108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_76844476_76844629_76845025_76845729_76845903_76857718_76857883_76862305_76862394_76867605
ES.11194.1	chr14	+	2971	2	Intergenic	novelGene_9319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAATTTGCGTGCATCT	NA	False	NA	NA	False	AATAAA	-17	NA	76977346	76990649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_76978019_76988350
ES.11195.1	chr14	-	205	1	Intergenic	novelGene_9320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77229697	77229492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77229500_77229700
ES.11196.1	chr14	+	3509	4	ISM	ENSMUSG00000034795.15	ENSMUST00000048208.10	1721	6	-18	17453	-18	-16944	intron_retention	FALSE	canonical	0	0	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTTCCTGTATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	77274193	77332191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_77274412_77305299_77305394_77306276_77306390_77329107
ES.11197.1	chr14	-	7365	9	NNC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	10	4975	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.2510080426634	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTGGATTCATTGT	NA	False	NA	NA	False	AATAAA	-21	NA	77274071	77256664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_77258218_77258261_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
ES.11197.10	chr14	-	1749	3	NIC	ENSMUSG00000044350.15	novel	2391	5	NA	NA	-7	962	intron_retention	FALSE	canonical	3	38	junction_2	17	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTTGTTCTCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	77274088	77271427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_77272846_77273251_77273431_77273936
ES.11197.3	chr14	-	2933	1	Genic_Genomic	ENSMUSG00000044350.15	novel	NA	NA	NA	NA	11407	2458	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACATTATCTCAGTTC	NA	False	NA	NA	False	NA	NA	NA	77262114	77259181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_77259200_77262100
ES.11197.4	chr14	-	2364	6	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	23.0599219426259	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	0	True	NA	NA	NA	77274342	77261640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_77262415_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
ES.11197.5	chr14	-	2552	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	-25	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTATCCATTCCTT	NA	False	NA	0	True	NA	NA	NA	77274369	77261640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
ES.11197.6	chr14	-	2715	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	-273	2	-10	-2	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274354	77261641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
ES.11197.8	chr14	-	2699	8	NNC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.9965983983955	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274056	77261641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_77262415_77266967_77267129_77268176_77268685_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
ES.11197.9	chr14	-	3048	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	38	junction_3	15.088627063675	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTATCCATTCCT	NA	False	NA	-1	True	NA	NA	NA	77274078	77261641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77272846_77273251_77273431_77273936
ES.11198.1	chr14	+	3199	16	NIC	ENSMUSG00000022012.10	novel	3142	19	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.09125161884775	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGATTTTGTGTAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	77394213	77959201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_77394483_77506246_77506318_77549498_77549565_77618018_77618129_77679197_77679340_77744243_77744388_77745576_77745715_77815051_77815226_77816403_77816611_77819835_77820070_77830219_77830433_77875055_77875241_77902058_77902167_77936634_77936738_77945039_77945126_77958252
ES.11198.2	chr14	+	3535	20	NIC	ENSMUSG00000022012.10	novel	3142	19	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.3181805837416	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGATTTTGTGTAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	77394220	77959201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_77394483_77506246_77506318_77549498_77549569_77618018_77618129_77679197_77679340_77744243_77744388_77745576_77745715_77815051_77815226_77816403_77816611_77819835_77820070_77830219_77830433_77848726_77848834_77852878_77852997_77870002_77870060_77875055_77875241_77902058_77902167_77906176_77906234_77936634_77936738_77945039_77945126_77958252
ES.11198.3	chr14	+	642	3	NNC	ENSMUSG00000022012.10	novel	3142	19	NA	NA	-52694	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTCTTCTGTCTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	77757601	77816643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_77757830_77815051_77815226_77816403
ES.11198.4	chr14	+	1282	1	Antisense	novelGene_ENSMUSG00002076975.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	77777179	77778461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_77777200_77778500
ES.11199.1	chr14	-	529	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	-13	-48	-13	48	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGGATT	NA	False	NA	NA	False	AATATA	-16	NA	77489767	77489238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_77489200_77489800
ES.112.1	chr1	+	187	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGTGTGCCTGTGTGTG	NA	False	NA	10	True	NA	NA	NA	13140119	13140306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13140100_13140300
ES.1120.1	chr1	-	1838	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105599372	105597534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_105597500_105599400
ES.11200.1	chr14	-	158	1	Intergenic	novelGene_9321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	77624072	77623914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77623900_77624100
ES.11201.1	chr14	-	162	1	Intergenic	novelGene_9322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATAAATCTAAAA	9524	False	NA	NA	False	NA	NA	NA	77726083	77725921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77725900_77726100
ES.11202.1	chr14	-	178	1	Intergenic	novelGene_9323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77775972	77775794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77775800_77776000
ES.11202.2	chr14	-	177	2	Intergenic	novelGene_9324	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	278	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77811152	77775794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77775922_77811102
ES.11202.3	chr14	-	168	1	Intergenic	novelGene_9325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCCCCATAG	NA	False	NA	NA	False	NA	NA	NA	77811153	77810985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_77811000_77811200
ES.11203.1	chr14	-	1794	1	ISM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	52440	12	17723	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAATTGAATTTACACT	NA	False	NA	-10	True	AATAAA	-10	NA	78059926	78058132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78058100_78059900
ES.11204.1	chr14	-	1872	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	3	4318	3	1216	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCGCCCCGGACTCTGC	NA	False	NA	NA	False	AATACA	-15	NA	78112363	78062438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ES.11204.2	chr14	-	883	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	-221	5531	-22	3	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGCTTTTCCACATCA	NA	False	NA	-4	True	NA	NA	NA	78112587	78063651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ES.11204.3	chr14	-	4812	5	NIC	ENSMUSG00000022013.5	novel	6193	6	NA	NA	6	2	intron_retention	FALSE	canonical	3	520	junction_2	43.8805195958298	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATGCTTTTCCACATC	NA	False	NA	-5	True	NA	NA	NA	78112360	78063652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78063911_78077607_78081913_78090337_78090412_78094378_78094431_78112237
ES.11205.1	chr14	-	815	2	Intergenic	novelGene_9326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGCCAACTC	NA	False	NA	NA	False	NA	NA	NA	78138346	78137419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_78137997_78138108
ES.11206.1	chr14	-	164	1	Intergenic	novelGene_9327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAATCTCTTACT	NA	False	NA	NA	False	NA	NA	NA	78167692	78167528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_78167500_78167700
ES.11207.1	chr14	-	4039	8	NNC	ENSMUSG00000022015.9	novel	2236	5	NA	NA	-126227	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGCTTTTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	78671710	78514889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78516438_78521678_78521778_78521859_78521906_78537277_78537440_78582222_78582865_78659162_78659958_78660025_78660754_78671691
ES.11208.1	chr14	-	9373	13	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-14	12096	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.4297916887747	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGGCAGCTTGTAAAGT	NA	False	NA	NA	False	NA	NA	NA	78774262	78717589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78717603_78729684_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752244_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.10	chr14	-	6664	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-176	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.3680705138462	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTCTTTTTTATTT	NA	False	NA	-1	True	AATAAA	-23	NA	78774424	78732393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774322
ES.11208.11	chr14	-	6725	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-66	-129	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	12.2271882389781	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTCTTTTTTATTT	NA	False	NA	-1	True	AATAAA	-23	NA	78774314	78732393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.13	chr14	-	6652	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-18	-130	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	22.3366429848962	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTGTCTTTTTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	78774266	78732394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740466_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.15	chr14	-	2490	4	ISM	ENSMUSG00000022016.18	ENSMUST00000227722.2	760	6	5763	-792	-258	-131	3prime_fragment	FALSE	canonical	3	52	junction_2	6.68331255192114	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTGTCTTTTTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	78741669	78732395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378
ES.11208.17	chr14	-	3436	1	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	5579	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATTTTGTCTTTTTTA	NA	False	NA	-4	True	AATAAA	-20	NA	78735832	78732396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78732400_78735800
ES.11208.18	chr14	-	6588	11	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-30	-143	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	21.5566695015719	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTGCAGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-9	NA	78774278	78732407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78733387_78736274_78736436_78739629_78739677_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.19	chr14	-	6441	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-14	2937	-14	-358	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGTGACGTTATTTGC	NA	False	NA	NA	False	CATAAA	-19	NA	78774262	78732622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.2	chr14	-	9414	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-49	-1	-49	1	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTTTTCCTTCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	78774297	78729684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.20	chr14	-	6259	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-14	3119	-14	383	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTGTTTATTTAT	NA	False	NA	NA	False	AAGAAA	-15	NA	78774262	78732804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.22	chr14	-	6397	7	ISM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	-29	16481	-29	-12853	5prime_fragment	FALSE	canonical	3	71	junction_2	3.39934634239519	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGGCAAAAAAACCAAA	NA	False	NA	NA	False	TATAAA	-9	NA	78774277	78746166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.23	chr14	-	4731	1	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	9848	-26356	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78764400	78759669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78759700_78764400
ES.11208.4	chr14	-	5385	1	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	6341	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTTTCCTTCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	78735070	78729685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78729700_78735100
ES.11208.5	chr14	-	3201	8	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4691521360708	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATGGTTTTCCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	78774262	78729687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78731988_78751623_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.6	chr14	-	9311	11	NIC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-35	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	21.5566695015719	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATGGTTTTCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	78774283	78729689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78733387_78736274_78736436_78739629_78739677_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.8	chr14	-	9350	12	NNC	ENSMUSG00000022016.18	novel	9364	12	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	24.8313318475331	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCATGGTTTTCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	78774262	78729689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753786_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ES.11208.9	chr14	-	3363	3	FSM	ENSMUSG00000022016.18	ENSMUST00000227808.2	3065	3	-363	65	-363	-65	multi-exon	FALSE	canonical	3	52	junction_2	8	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAATGTAGAAATGC	NA	False	NA	63	True	AATAAA	-11	NA	78741774	78732329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_78733387_78736274_78736436_78739629
ES.11209.1	chr14	+	1265	1	Intergenic	novelGene_9328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCGTTTGACATCCACT	NA	False	NA	NA	False	NA	NA	NA	78828234	78829499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_78828200_78829500
ES.1121.1	chr1	-	2883	1	Antisense	novelGene_ENSMUSG00000026319.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGCTAAATTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	105631983	105629100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_105629100_105632000
ES.11210.1	chr14	+	351	1	Intergenic	novelGene_9329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-22	NA	78950747	78951098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_78950700_78951100
ES.11211.1	chr14	-	10004	1	ISM	ENSMUSG00000034731.12	ENSMUST00000226342.3	15257	30	163422	601	59920	-601	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCCTGCACTCTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	78806794	78796790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78796800_78806800
ES.11211.11	chr14	-	4786	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-23	285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGAATGTTTGTCTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	78970239	78806763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969971
ES.11211.12	chr14	-	4734	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	18	280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTCTGGGAATGTTTG	NA	False	NA	NA	False	AGTAAA	-12	NA	78970198	78806768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969977
ES.11211.13	chr14	-	4091	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-4	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	8.609580124905	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTGTGATTTACT	NA	False	NA	0	True	AATACA	-19	NA	78970220	78807433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969977
ES.11211.14	chr14	-	3876	30	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	18	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	10.5794092518867	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTGTTGTGATTTAC	NA	False	NA	-1	True	AATACA	-18	NA	78970198	78807434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78962346_78962542_78969797_78969921_78969977
ES.11211.15	chr14	-	3848	31	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-705	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	8.74452209481265	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGTTGTTGTGATTTA	3341	False	NA	-2	True	AATACA	-17	NA	78963234	78807435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78963109
ES.11211.16	chr14	-	3763	31	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-1236	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	8.74452209481265	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTGTTGTGATTT	2810	False	NA	-3	True	AATACA	-16	NA	78963765	78807436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78963724
ES.11211.17	chr14	-	3492	28	NNC	ENSMUSG00000034731.12	novel	3308	28	NA	NA	1113	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	9.03050765943452	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTTGTTGTGATTT	NA	False	NA	-3	True	AATACA	-16	NA	78888071	78807436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78887914
ES.11211.18	chr14	-	3939	31	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	9.83446321192299	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGTTGTTGTGAT	NA	False	NA	-5	True	AATACA	-14	NA	78970204	78807438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969977
ES.11211.19	chr14	-	4120	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	8.609580124905	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGTTGTTGTGA	NA	False	NA	-6	True	AATACA	-13	NA	78970249	78807439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969971
ES.11211.2	chr14	-	3992	1	ISM	ENSMUSG00000034731.12	ENSMUST00000226342.3	15257	30	165141	4894	61639	-4894	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGACAGAGCTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	78805075	78801083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78801100_78805100
ES.11211.21	chr14	-	2934	16	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	4441	4591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.86891866191811	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCTAAAACCATTTAAT	NA	False	NA	NA	False	NA	NA	NA	78862273	78830908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78832066_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245
ES.11211.22	chr14	-	4250	16	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-41	-6641	intron_retention	FALSE	non_canonical	0	0	junction_15	10.0810052408808	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTTTTTATTCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	78970257	78842140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969971
ES.11211.23	chr14	-	3636	3	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	20	-123754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAGCTGACCTTGACC	NA	False	NA	NA	False	NA	NA	NA	78970196	78959253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78962542_78969797_78969921_78969971
ES.11211.24	chr14	-	2791	1	NIC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-1552	-125791	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAAAAACCAACCAAAC	2494	False	NA	NA	False	NA	NA	NA	78964081	78961290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_78961300_78964100
ES.11211.25	chr14	-	1601	3	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	2	-125807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAC	NA	False	NA	NA	False	ACTAAA	-36	NA	78970214	78961306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78962542_78969797_78969921_78969971
ES.11211.3	chr14	-	3165	1	ISM	ENSMUSG00000034731.12	ENSMUST00000226342.3	15257	30	165085	5777	61583	5082	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTATGTTGTGAAA	NA	False	NA	NA	False	TATAAA	-10	NA	78805131	78801966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78802000_78805100
ES.11211.4	chr14	-	5713	20	ISM	ENSMUSG00000034731.12	ENSMUST00000228362.2	3308	28	12968	-3355	12968	2893	3prime_fragment	FALSE	canonical	3	21	junction_18	6.45075099237685	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTCATGCTTGTCATGC	NA	False	NA	NA	False	AATAAA	-14	NA	78853746	78804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666
ES.11211.5	chr14	-	5314	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-29	813	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTCTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78970245	78806235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969977
ES.11211.6	chr14	-	5273	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	12	813	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTCTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78970204	78806235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969915_78969971
ES.11211.7	chr14	-	5322	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	-31	813	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTCTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78970247	78806235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969921_78969971
ES.11211.8	chr14	-	4094	24	ISM	ENSMUSG00000034731.12	ENSMUST00000074729.6	3967	29	100250	-813	4435	813	3prime_fragment	FALSE	canonical	2	3	junction_1	8.82597986655957	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTCTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78862279	78806235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_78807598_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245
ES.11211.9	chr14	-	5276	32	NNC	ENSMUSG00000034731.12	novel	15257	30	NA	NA	12	813	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	8.609580124905	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTCTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	78970204	78806235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78889120_78889202_78891125_78891237_78962346_78962542_78969797_78969933_78969986
ES.11212.1	chr14	+	3596	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	-188	-2	14	2	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCCGTCCTTTTGTT	9220	False	NA	5	True	AATAAA	-21	NA	79086505	79302710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ES.11212.10	chr14	+	5722	34	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	148	104261	8	32781	5prime_fragment	FALSE	canonical	2	24	junction_28	14.2462277319776	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTTTCTTACCCTAAT	9354	False	NA	NA	False	AATAAA	-15	NA	79086639	79335489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824
ES.11212.11	chr14	+	5947	44	NNC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	20	-760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.8980908226975	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAACATGTTCCTGT	9366	False	NA	24	True	AATAAA	-37	NA	79086651	79438990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79086889_79145561_79145694_79149608_79149721_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246225_79246310_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.12	chr14	+	6575	45	NNC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	24	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	15.5586566746831	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTTTCAAAGTCTT	9370	False	NA	NA	False	ACTAAA	-16	NA	79086655	79439437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256152_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.13	chr14	+	3321	14	NNC	ENSMUSG00000058997.9	novel	3236	13	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.0917900828578	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACAGGTTTGTTTTAT	9371	False	NA	NA	False	AATAAA	-11	NA	79086656	79195725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79188129_79188188_79193951
ES.11212.15	chr14	+	6047	44	NIC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	-21	-760	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	14.9478632408723	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAACATGTTCCTGT	9377	False	NA	24	True	AATAAA	-37	NA	79086662	79438990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.17	chr14	+	7257	1	Intergenic	novelGene_9330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79154231	79161488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79154200_79161500
ES.11212.19	chr14	+	3236	1	Intergenic	novelGene_9331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTCATCTCTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	79216056	79219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79216100_79219300
ES.11212.2	chr14	+	6302	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	20	732	20	-732	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCTTTCTCTGCAGT	9226	False	NA	52	True	NA	NA	NA	79086511	79439018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.20	chr14	+	1777	13	NIC	ENSMUSG00000058997.9	novel	3406	26	NA	NA	133087	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.9495733136937	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCGTCCTTTTGTTGA	NA	False	NA	7	True	AATAAA	-23	NA	79219780	79302712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ES.11212.21	chr14	+	4202	30	NIC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	145144	-766	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	15.1642611325313	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAACCCTCCCAACATGT	NA	False	NA	18	True	AATAAA	-31	NA	79231837	79438984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79434851_79434951_79435661_79435901_79438537
ES.11212.22	chr14	+	1034	6	ISM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	188868	-1	-105799	1	3prime_fragment	FALSE	canonical	3	47	junction_1	11.1462998344742	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGTCTCCGTCCTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	79275561	79302709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ES.11212.23	chr14	+	2602	1	Intergenic	novelGene_9332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGGAAATTATTATTT	NA	False	NA	NA	False	NA	NA	NA	79281425	79284027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79281400_79284000
ES.11212.24	chr14	+	3153	19	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	232114	503	-62755	-503	3prime_fragment	FALSE	canonical	3	24	junction_2	9.8801459478399	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTCAGCCCTTTT	NA	False	NA	NA	False	GATAAA	-17	NA	79318605	79439247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.25	chr14	+	2879	19	NNC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	-62744	-777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.9080317612956	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACAAGTCTGCAAACCC	NA	False	NA	7	True	AATAAA	-20	NA	79318616	79438973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394632_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.26	chr14	+	2679	17	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	237567	783	-57302	-783	3prime_fragment	FALSE	canonical	3	24	junction_3	9.47694571051243	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAGGGACAAGTCTGC	NA	False	NA	1	True	AATAAA	-14	NA	79324058	79438967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.27	chr14	+	104	1	Intergenic	novelGene_9334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAGTCTCTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	79378604	79378708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79378600_79378700
ES.11212.28	chr14	+	2426	9	NNC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	-2597	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	14.9493938004188	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATGAGTATGTGTGTG	NA	False	NA	20	True	AATAAA	-29	NA	79378763	79439744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79378985_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.3	chr14	+	6961	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	97	-4	-43	4	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGTGGTTTGTAT	9303	False	NA	30	True	AATAAA	-39	NA	79086588	79439754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.4	chr14	+	8700	45	NNC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	-14	-6	intron_retention	FALSE	canonical	0	0	junction_16	16.530775206433	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATGAGTATGTGTGTG	9332	False	NA	20	True	AATAAA	-29	NA	79086617	79439744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246225_79246310_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.5	chr14	+	3553	27	NNC	ENSMUSG00000058997.9	novel	3406	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.9819343619788	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGTCTCCGTCCTTTTGT	9346	False	NA	4	True	AATAAA	-20	NA	79086631	79302709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246225_79246310_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ES.11212.6	chr14	+	5536	2	ISM	ENSMUSG00000058997.9	ENSMUST00000227676.2	3823	5	3	41574	3	-41574	5prime_fragment	FALSE	canonical	3	64	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCTGATTGGCC	9349	False	NA	NA	False	NA	NA	NA	79086634	79111505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79086884_79106218
ES.11212.7	chr14	+	8602	44	NIC	ENSMUSG00000058997.9	novel	7054	45	NA	NA	4	-2	intron_retention	FALSE	canonical	2	24	junction_28	13.6497958984458	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTATGTGTGTGTGGT	9350	False	NA	24	True	AATAAA	-33	NA	79086635	79439748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ES.11212.8	chr14	+	4521	35	ISM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	148	103768	8	33274	5prime_fragment	FALSE	canonical	2	24	junction_28	14.4855255281605	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGCTAAAAACACCTC	9354	False	NA	NA	False	AATAAA	-15	NA	79086639	79335982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673
ES.11212.9	chr14	+	3301	13	FSM	ENSMUSG00000058997.9	ENSMUST00000228884.2	3236	13	-44	-21	8	21	multi-exon	FALSE	canonical	0	0	junction_12	18.263503375737	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTGTAAATGTTTCG	9354	False	NA	NA	False	AATAAA	-32	NA	79086639	79195746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79193951
ES.11213.1	chr14	-	179	1	Intergenic	novelGene_9333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	79330455	79330276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79330300_79330500
ES.11214.1	chr14	-	3790	1	Intergenic	novelGene_9335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTCCCCTCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	79444623	79440833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79440800_79444600
ES.11215.1	chr14	+	158	1	Intergenic	novelGene_9336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1650	False	NA	NA	False	NA	NA	NA	79518220	79518378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79518200_79518400
ES.11216.1	chr14	-	918	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	11	-11	11	11	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGCCTTATTTCCGTC	NA	False	NA	0	True	AATAAA	-25	NA	79539074	79526184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ES.11216.2	chr14	-	827	5	NNC	ENSMUSG00000022018.8	novel	918	5	NA	NA	235	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	64.6968894151798	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTGTACTTTGAAAGCT	NA	False	NA	-14	True	AATAAA	-11	NA	79538850	79526198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538741
ES.11217.1	chr14	+	183	1	Intergenic	novelGene_9337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAAACGAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	79560503	79560686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79560500_79560700
ES.11218.1	chr14	+	143	1	Antisense	novelGene_ENSMUSG00000022020.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATATATTCAGTCCA	NA	False	NA	NA	False	NA	NA	NA	79570031	79570174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_79570000_79570200
ES.11219.1	chr14	+	3330	7	Antisense	novelGene_ENSMUSG00000022020.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	79572894	79584543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_79573372_79573827_79573924_79576971_79577118_79577477_79577579_79578428_79578534_79580563_79580760_79582334
ES.1122.1	chr1	-	1845	1	Antisense	novelGene_ENSMUSG00000026319.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACAAAATCATTTGAGA	NA	False	NA	NA	False	NA	NA	NA	105666360	105664515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_105664500_105666400
ES.11220.1	chr14	+	241	1	Intergenic	novelGene_9339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCCTGCTTACCCCAT	NA	False	NA	NA	False	AGTAAA	-20	NA	79613189	79613430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79613200_79613400
ES.11221.1	chr14	-	4045	20	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	12	-300	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	67.7929060915926	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTATATCTTTTATT	NA	False	NA	-15	True	AATAAA	-18	NA	79628206	79571943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.10	chr14	-	3988	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	111	-306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	50.2906235237189	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628019	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79627796
ES.11221.11	chr14	-	4124	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	0	-306	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628218	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.12	chr14	-	3708	18	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	11	-306	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	52.6241488108101	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628207	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79624461_79624547_79628001
ES.11221.13	chr14	-	3509	17	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-11	-306	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	53.8870346187281	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628143	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79624461_79624547_79628001
ES.11221.14	chr14	-	3855	19	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-34	-306	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	64.779111859714	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628166	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622197_79624461_79624547_79628001
ES.11221.15	chr14	-	4093	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	12	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	50.0959190756417	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTTGCTTGTTTATAT	NA	False	NA	-23	True	AATAAA	-10	NA	79628206	79571951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588687_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.16	chr14	-	2904	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	-40	10359	-40	8	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTGTTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	79628258	79573067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.17	chr14	-	2757	19	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	64.779111859714	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	79628187	79573068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622197_79624461_79624547_79628001
ES.11221.18	chr14	-	2496	17	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	19	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	54.4247975995318	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	79628199	79573068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79628001
ES.11221.19	chr14	-	3770	22	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	73.4494133845234	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	79628116	79573069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79575878_79575937_79576163_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.2	chr14	-	6350	14	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	13815	-300	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	67.1558286781109	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTATATCTTTTATT	NA	False	NA	-15	True	AATAAA	-18	NA	79610731	79571943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441
ES.11221.20	chr14	-	4519	14	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14520	6	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	67.1558286781109	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	79610026	79573069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441
ES.11221.21	chr14	-	2992	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	12	6	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	79628206	79573069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.22	chr14	-	2876	20	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-33	4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	67.7929060915926	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTTTGTTTGTTTGT	NA	False	NA	-6	True	AATAAA	-15	NA	79628165	79573071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.23	chr14	-	8292	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_16	77.30813978136	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGTTTTTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-13	NA	79628126	79573073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79619070_79619520_79619672_79620675_79622199_79624461_79624547_79628001
ES.11221.24	chr14	-	2786	20	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	57.1243480114572	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGTTTTTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-13	NA	79628218	79573073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.25	chr14	-	8785	17	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-12	2	intron_retention	FALSE	canonical	1	1	junction_15	53.9836491449031	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGTTTTTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-13	NA	79628144	79573073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79624461_79624547_79628001
ES.11221.26	chr14	-	2702	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	48.9853276693114	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGTTTTTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-13	NA	79628146	79573073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614878_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.29	chr14	-	2576	18	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	52.8671377705978	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGGGTTTTTTGTTTGTT	NA	False	NA	-9	True	AATAAA	-12	NA	79628117	79573074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.3	chr14	-	3996	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	-9	9236	-9	-301	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTATATCTTTTAT	NA	False	NA	-16	True	AATAAA	-17	NA	79628227	79571944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.30	chr14	-	2562	18	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	53.0217687226436	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGGGTTTTTTGTTTGT	NA	False	NA	-10	True	AATAAA	-11	NA	79628163	79573075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596929_79612171_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.32	chr14	-	5316	22	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.560480860322	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAAGGGGTTTTTTGTTT	NA	False	NA	-12	True	AATAAA	-9	NA	79628198	79573077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79597629_79599970_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.35	chr14	-	5121	1	NIC	ENSMUSG00000022020.16	novel	1287	8	NA	NA	20	-4704	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAGTCACCTTA	NA	False	NA	NA	False	AATAAA	-13	NA	79588241	79583120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79583100_79588200
ES.11221.36	chr14	-	5228	2	ISM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	35043	21020	-4914	-5312	internal_fragment	FALSE	canonical	3	180	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAACTAATATGAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	79593175	79583728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_79588942_79593160
ES.11221.37	chr14	-	3467	14	NNC	ENSMUSG00000022020.16	novel	2154	16	NA	NA	163	-8043	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	60.6166536376337	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATTATGAATGTCA	NA	False	NA	NA	False	AATAAA	-13	NA	79627967	79586459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79627796
ES.11221.38	chr14	-	3187	14	NIC	ENSMUSG00000022020.16	novel	2154	16	NA	NA	40	-8329	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	42.6480019579572	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAGAAATCAACACC	NA	False	NA	NA	False	NA	NA	NA	79628178	79586745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.39	chr14	-	2041	14	NIC	ENSMUSG00000022020.16	novel	2154	16	NA	NA	-2	-9517	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	42.6480019579572	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTTGTCATTTCC	NA	False	NA	NA	False	TTTAAA	-14	NA	79628220	79587933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.4	chr14	-	2884	7	NIC	ENSMUSG00000022020.16	novel	1287	8	NA	NA	-681	-302	intron_retention	FALSE	canonical	1	3	junction_6	79.2515334587007	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGTTTATATCTTTTA	NA	False	NA	-17	True	AATAAA	-16	NA	79588942	79571945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79588128
ES.11221.40	chr14	-	172	1	Intergenic	novelGene_9338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGTCTAACCAT	NA	False	NA	NA	False	NA	NA	NA	79609442	79609270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79609300_79609400
ES.11221.41	chr14	-	201	1	Intergenic	novelGene_9340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGGATTGAAGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	79620635	79620434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79620400_79620600
ES.11221.42	chr14	-	175	1	Intergenic	novelGene_9341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCATTCATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	79625935	79625760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79625800_79625900
ES.11221.5	chr14	-	3897	20	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	3	-304	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	48.9853276693114	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	-19	True	AATAAA	-14	NA	79628215	79571947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614878_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.6	chr14	-	3731	18	NNC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14	-304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	53.0217687226436	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTGTTTATATCTTT	NA	False	NA	-19	True	AATAAA	-14	NA	79628204	79571947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596929_79612171_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.8	chr14	-	3809	20	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	14	-305	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	57.1243480114572	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTTGTTTATATCTT	NA	False	NA	-20	True	AATAAA	-13	NA	79628116	79571948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11221.9	chr14	-	4431	20	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	-33	-306	intron_retention	FALSE	canonical	3	27	junction_7	56.5892034767985	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628165	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79573372_79573827_79573926_79576973_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ES.11222.1	chr14	+	177	1	Intergenic	novelGene_9342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTCTCTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	79632550	79632727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79632600_79632700
ES.11223.1	chr14	-	228	1	Intergenic	novelGene_9343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCATAACAGG	7589	False	NA	NA	False	TATAAA	-9	NA	79634556	79634328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79634300_79634600
ES.11224.1	chr14	+	1857	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	0	-58	0	58	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCATAGAGTTTATTTTA	NA	False	NA	59	True	AATAAA	-15	NA	79635211	79661085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
ES.11224.2	chr14	+	2843	11	NNC	ENSMUSG00000022022.4	novel	1799	11	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6334654771107	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCCTACAGAGTTTT	NA	False	NA	4	True	AATAAA	-15	NA	79635442	79661030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79636753_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650430_79650545_79653317_79653455_79656627_79656727_79660836
ES.11225.1	chr14	-	222	1	Intergenic	novelGene_9344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATCCAGGTATTTTCT	9712	False	NA	NA	False	NA	NA	NA	79652448	79652226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79652200_79652400
ES.11226.1	chr14	+	4647	1	FSM	ENSMUSG00000043881.10	ENSMUST00000061222.9	4526	1	-118	-3	-118	3	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCTGGCTTTATGTTT	3091	False	NA	NA	False	AATAAA	-18	NA	79663832	79668479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79663800_79668500
ES.11226.2	chr14	+	4461	2	Genic_Genomic	ENSMUSG00000043881.10	novel	4526	1	NA	NA	87	44807	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGAAGCATTAAAAGCAA	3296	False	NA	NA	False	AATAAA	-31	NA	79664037	79713283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_79668473_79713257
ES.11226.3	chr14	+	2999	1	FSM	ENSMUSG00000075502.3	ENSMUST00000226192.2	2984	1	-13	-2	-13	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTTCGTATGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	79689261	79692260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79689300_79692300
ES.11226.4	chr14	+	176	1	Intergenic	novelGene_9345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7712	False	NA	NA	False	NA	NA	NA	79712019	79712195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79712000_79712200
ES.11227.1	chr14	+	4317	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-82	0	-82	0	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTGTTTGTAATTCT	NA	False	NA	NA	False	ATTAAA	-39	NA	79718551	79819934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.10	chr14	+	3692	1	Intergenic	novelGene_9351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATCTAATAAAAAGAAAAAA	9447	False	NA	NA	False	NA	NA	NA	79779377	79783069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79779400_79783100
ES.11227.11	chr14	+	3601	8	NNC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	44552	-26	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.507528884819	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATATTTCTGTTTTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	79797689	79819908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79797826_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.12	chr14	+	172	1	Intergenic	novelGene_9352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCAAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	79807508	79807680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79807500_79807700
ES.11227.13	chr14	+	3177	2	ISM	ENSMUSG00000036461.17	ENSMUST00000227192.2	3765	8	57044	22	57032	-22	3prime_fragment	FALSE	canonical	3	39	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79810169	79819912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79811059_79817624
ES.11227.2	chr14	+	3972	8	NIC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	-59	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.3856336258122	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79718574	79819912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79719078_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.3	chr14	+	4116	8	NIC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	-14	-22	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	10.5133539959852	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79718619	79819912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79719078_79773562_79773863_79798186_79798368_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.4	chr14	+	4360	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	-14	-111	-14	111	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCCATGTTCTTATA	NA	False	NA	NA	False	NA	NA	NA	79718619	79820045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.5	chr14	+	213	1	Intergenic	novelGene_9346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTCTGTTCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	79729921	79730134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79729900_79730100
ES.11227.6	chr14	+	4523	1	Intergenic	novelGene_9347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTTATTTATTTGTAC	NA	False	NA	NA	False	NA	NA	NA	79742600	79747123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79742600_79747100
ES.11227.7	chr14	+	165	1	Intergenic	novelGene_9348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACCACTTGT	NA	False	NA	NA	False	NA	NA	NA	79749927	79750092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79749900_79750100
ES.11227.8	chr14	+	3870	9	FSM	ENSMUSG00000036461.17	ENSMUST00000110835.3	3888	9	-4	22	-4	-22	multi-exon	FALSE	canonical	3	8	junction_1	8.6854763830201	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGTTTTCAAGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	79753109	79819912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79753211_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ES.11227.9	chr14	+	150	1	Intergenic	novelGene_9350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGACCTCTCTG	NA	False	NA	13	True	NA	NA	NA	79766457	79766607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_79766500_79766600
ES.11228.1	chr14	-	3780	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	488	-564	-70	564	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGAATTGTTGAAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	79718472	79696812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.10	chr14	-	2311	11	FSM	ENSMUSG00000022023.7	ENSMUST00000227584.2	1512	11	-83	-716	-83	14	multi-exon	FALSE	canonical	0	0	junction_1	143.182436073703	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718485	79698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79701363_79701445_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.12	chr14	-	3190	9	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	-1	1000	-1	13	intron_retention	FALSE	canonical	3	326	junction_1	16.2399007078245	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATCGGGGTCTCTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	79718961	79698376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812
ES.11228.13	chr14	-	2851	10	NNC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	145.676540050166	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCATAAAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	79718444	79698389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79699570_79703622_79703790_79704712_79704925_79707544_79707621_79708126_79708174_79709791_79710621_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.15	chr14	-	4203	8	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-12	78	intron_retention	FALSE	canonical	3	326	junction_1	17.7350109175297	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAATGCATTATTTCCA	NA	False	NA	NA	False	TATAAA	-16	NA	79718972	79699013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.16	chr14	-	1992	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	4	1708	4	7	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATCTGTTATTTAAAA	NA	False	NA	98	True	NA	NA	NA	79718956	79699084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.18	chr14	-	1444	9	NIC	ENSMUSG00000022023.7	novel	1512	11	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	118.711835972661	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTATGTATCTGTTA	NA	False	NA	91	True	NA	NA	NA	79718462	79699091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.19	chr14	-	1887	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	5	1812	5	-97	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATTTTTGTTCCTTA	NA	False	NA	-6	True	AATAAA	-15	NA	79718955	79699188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.2	chr14	-	3725	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	-17	-4	-17	4	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTTCTTCTGAG	NA	False	NA	NA	False	AATAAA	-22	NA	79718977	79697372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.20	chr14	-	1752	8	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	17	-97	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	112.21899144448	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATTTTTGTTCCTTA	NA	False	NA	-6	True	AATAAA	-15	NA	79718943	79699188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.22	chr14	-	2324	9	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	39	1826	39	-111	intron_retention	FALSE	canonical	3	326	junction_1	16.2399007078245	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTCATGTGAAATTT	NA	False	NA	-20	True	AATAAA	-1	NA	79718921	79699202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812
ES.11228.24	chr14	-	3959	6	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-83	352	intron_retention	FALSE	canonical	3	39	junction_1	131.566561101216	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTAGACATATGGCA	NA	False	NA	NA	False	GATAAA	-17	NA	79718485	79701499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79704904_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.3	chr14	-	4298	9	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	28	17	intron_retention	FALSE	canonical	3	326	junction_1	16.9443021396574	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGGGTCTCTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	79718932	79698372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.4	chr14	-	2721	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	-13	996	-13	17	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGGGTCTCTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	79718973	79698372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.5	chr14	-	4324	8	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-50	17	intron_retention	FALSE	canonical	3	326	junction_1	17.7350109175297	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGGGTCTCTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	79718452	79698372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.6	chr14	-	2698	9	NNC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-50	14	intron_retention	FALSE	canonical	2	3	junction_1	118.224825544384	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718452	79698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79699565_79703622_79703790_79704712_79704904_79707544_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.7	chr14	-	2535	8	NIC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	47	14	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	112.21899144448	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718913	79698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_79699570_79703622_79703790_79704712_79704904_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11228.9	chr14	-	3870	9	NNC	ENSMUSG00000022023.7	novel	3704	10	NA	NA	-84	14	intron_retention	FALSE	canonical	2	3	junction_3	117.35922417944	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGGGTCTCTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	79718486	79698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_79699570_79703622_79703790_79704712_79704925_79707544_79707621_79708126_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ES.11229.1	chr14	-	219	1	Intergenic	novelGene_9349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGCAAATGGCA	NA	False	NA	NA	False	NA	NA	NA	79751706	79751487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79751500_79751700
ES.1123.1	chr1	+	1099	4	FSM	ENSMUSG00000026321.9	ENSMUST00000187812.2	1041	4	-64	6	-32	-6	multi-exon	FALSE	canonical	3	7	junction_1	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAAATGGTTGGCTTG	7004	False	NA	NA	False	CATAAA	-12	NA	105708410	105742122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105708555_105735867_105735950_105737054_105737181_105741375
ES.11230.1	chr14	-	4234	2	Antisense	novelGene_ENSMUSG00000036461.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCTCCTGTGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	79820731	79816444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_79820066_79820118
ES.11231.1	chr14	+	1317	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	-46	6121	-46	98	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATGATTTTTCCTGCA	NA	False	NA	26	True	ATTAAA	-22	NA	79825084	79866515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.12	chr14	+	7324	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	81	-13	-37	13	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAATTGTAGCGTATCT	NA	False	NA	NA	False	AATAAA	-31	NA	79825211	79872649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.13	chr14	+	4914	12	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	87	6220	-31	0	intron_retention	FALSE	canonical	3	1684	junction_8	88.4524432152318	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCGTGTGTTCGAGAGAG	NA	False	NA	30	True	AATAAA	-19	NA	79825217	79866416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280
ES.11231.15	chr14	+	1655	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	87	5650	-31	569	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACACAGATGTAACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	79825217	79866986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.16	chr14	+	3601	12	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	103	7517	-15	-1297	5prime_fragment	FALSE	canonical	3	1684	junction_8	88.4524432152318	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCCGTGTTCTGAGAA	NA	False	NA	NA	False	AATACA	-18	NA	79825233	79865119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280
ES.11231.17	chr14	+	4196	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	113	3083	-5	-3083	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTCAGGAAATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	79825243	79869553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.18	chr14	+	1131	12	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	1684	junction_7	89.8103603513886	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCGTGTGTTCGAGAGAG	NA	False	NA	30	True	AATAAA	-19	NA	79825258	79866416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.19	chr14	+	2944	12	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	10	1812	intron_retention	FALSE	canonical	3	1684	junction_7	89.8103603513886	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTTTAAGAGTTTTCAT	NA	False	NA	24	True	AATAAA	-17	NA	79825258	79868229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.2	chr14	+	3023	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	-30	4399	-30	1820	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTTTCATATCTGATA	NA	False	NA	32	True	AATAAA	-25	NA	79825100	79868237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.21	chr14	+	6868	6	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	19554	-12	3776	12	3prime_fragment	FALSE	canonical	3	1684	junction_1	101.611023024079	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAATTGTAGCGTATC	NA	False	NA	NA	False	AATAAA	-30	NA	79844684	79872648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.22	chr14	+	6286	1	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-130	1817	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAGTTTTCATATCTG	NA	False	NA	29	True	AATAAA	-22	NA	79861948	79868234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79861900_79868200
ES.11231.3	chr14	+	1276	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-18	89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTTTAGAAATGATT	NA	False	NA	17	True	ATTAAA	-13	NA	79825112	79866506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.5	chr14	+	1068	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	712.517977154679	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCGTGTGTTCGAGAGA	NA	False	NA	29	True	AATAAA	-18	NA	79825195	79866415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840345_79844685_79844718_79846395_79846493_79847679_79847788_79857173_79857240_79862280_79862463_79866291
ES.11231.6	chr14	+	2917	12	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-53	1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	532.160061051666	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTAAGAGTTTTCATA	NA	False	NA	25	True	AATAAA	-18	NA	79825195	79868230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840354_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.7	chr14	+	1097	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	73	6222	-45	-2	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGCGTGTGTTCGAGAG	NA	False	NA	28	True	AATAAA	-17	NA	79825203	79866414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11231.8	chr14	+	3340	6	NIC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-41	-19825	intron_retention	FALSE	canonical	3	1711	junction_5	76.9066967175161	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTGCAGGTCAGAGG	NA	False	NA	NA	False	NA	NA	NA	79825207	79842518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_79825307_79825393_79825452_79832808_79834258_79834835_79834907_79840286_79840341_79840909
ES.11231.9	chr14	+	1108	13	NNC	ENSMUSG00000022024.11	novel	7392	13	NA	NA	-40	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	507.714233654677	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCATTGTGTGCTTTA	NA	False	NA	46	True	AATAAA	-35	NA	79825208	79866432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834911_79840292_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ES.11232.1	chr14	-	414	1	Intergenic	novelGene_9353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTTAATTAATACTAA	NA	False	NA	NA	False	NA	NA	NA	79828517	79828103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79828100_79828500
ES.11233.1	chr14	-	160	1	Intergenic	novelGene_9354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79835109	79834949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79834900_79835100
ES.11234.1	chr14	-	4172	6	Antisense	novelGene_ENSMUSG00000022024.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79863159	79841497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_79843702_79843927_79844718_79846395_79846491_79847677_79847786_79857146_79857236_79862273
ES.11234.2	chr14	-	156	1	Intergenic	novelGene_9355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	79843921	79843765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79843800_79843900
ES.11235.1	chr14	-	187	1	Intergenic	novelGene_9356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTATCAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	79864262	79864075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79864100_79864300
ES.11236.1	chr14	-	176	1	Intergenic	novelGene_9357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCTATGTG	NA	False	NA	NA	False	NA	NA	NA	79917304	79917128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_79917100_79917300
ES.11237.1	chr14	-	3698	3	FSM	ENSMUSG00000036422.11	ENSMUST00000195355.2	3704	3	2	4	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGAATCTGCTAATTG	NA	False	NA	1	True	AATAAA	-15	NA	80008750	80004223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_80005188_80005550_80005762_80006227
ES.11237.2	chr14	-	3557	3	FSM	ENSMUSG00000036422.11	ENSMUST00000039568.11	4000	3	432	11	324	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAGAATCTGCTAAT	NA	False	NA	-1	True	AATAAA	-13	NA	80008320	80004225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_80005188_80005550_80005762_80005936
ES.11238.1	chr14	-	3630	4	Antisense	novelGene_ENSMUSG00000097927.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTACATAGCTCTGTCT	NA	False	NA	NA	False	AATACA	-12	NA	80217733	80212570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_80212892_80213991_80214312_80214644_80217521_80217620
ES.11239.1	chr14	-	2439	1	Intergenic	novelGene_9358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80921831	80919392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_80919400_80921800
ES.1124.1	chr1	+	6548	1	Antisense	novelGene_ENSMUSG00000099843.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAAGATAATGTCT	NA	False	NA	NA	False	NA	NA	NA	105906338	105912886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_105906300_105912900
ES.11240.1	chr14	-	179	1	Intergenic	novelGene_9359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACTTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	81100378	81100199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_81100200_81100400
ES.11241.1	chr14	-	174	1	Intergenic	novelGene_9360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	81412235	81412061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_81412100_81412200
ES.11242.1	chr14	+	207	1	Intergenic	novelGene_9361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTCTTGGAGAGATC	NA	False	NA	NA	False	NA	NA	NA	81711412	81711619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_81711400_81711600
ES.11243.1	chr14	+	177	1	Intergenic	novelGene_9362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTGATCTGCACTA	NA	False	NA	NA	False	NA	NA	NA	81881951	81882128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_81882000_81882100
ES.11244.1	chr14	-	6864	1	Intergenic	novelGene_9363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGCTTAACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	82035202	82028338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_82028300_82035200
ES.11245.1	chr14	+	201	1	Intergenic	novelGene_9364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTAATACATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	82458432	82458633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_82458400_82458600
ES.11246.1	chr14	-	195	1	Intergenic	novelGene_9365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGTGGAAAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	83619180	83618985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_83619000_83619200
ES.11247.1	chr14	-	5575	1	Intergenic	novelGene_9366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACCATGTGTTAAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	83704039	83698464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_83698500_83704000
ES.11248.1	chr14	+	307	1	Intergenic	novelGene_9367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATTTAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85998122	85998429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_85998100_85998400
ES.11249.1	chr14	+	159	1	Intergenic	novelGene_9368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86241246	86241405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_86241200_86241400
ES.1125.1	chr1	-	5213	1	NIC	ENSMUSG00000099843.2	novel	471	3	NA	NA	5620	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTTAGTCTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	105912362	105907149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_105907100_105912400
ES.11250.1	chr14	-	181	1	Genic_Genomic	ENSMUSG00000115664.2	novel	NA	NA	NA	NA	6034	72	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGATTTTAGAGT	NA	False	NA	NA	False	NA	NA	NA	86640501	86640320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_86640300_86640500
ES.11251.1	chr14	+	179	1	Intergenic	novelGene_9369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86799134	86799313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_86799100_86799300
ES.11252.1	chr14	+	3855	1	Intergenic	novelGene_9373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGTCCACACTGTTAC	NA	False	NA	NA	False	NA	NA	NA	87123689	87127544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87123700_87127500
ES.11253.1	chr14	+	4105	1	Intergenic	novelGene_9375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCAGGTATCACATGG	NA	False	NA	NA	False	NA	NA	NA	87251623	87255728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87251600_87255700
ES.11254.1	chr14	+	8845	1	Intergenic	novelGene_9376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTCCAGGTTTATATAC	NA	False	NA	NA	False	ATTAAA	-14	NA	87281283	87290128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87281300_87290100
ES.11255.1	chr14	+	4154	1	Intergenic	novelGene_9377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGGAGGAGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	87332471	87336625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87332500_87336600
ES.11256.1	chr14	+	2851	1	Antisense	novelGene_ENSMUSG00000022021.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87351025	87353876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_87351000_87353900
ES.11257.1	chr14	+	4862	2	Antisense	novelGene_ENSMUSG00000022021.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGCAAATGGGTGTTC	NA	False	NA	NA	False	ATTAAA	-36	NA	87361521	87366508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_87362998_87363122
ES.11257.2	chr14	+	4987	1	Intergenic	novelGene_9378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGCAAATGGGTGTTC	NA	False	NA	NA	False	ATTAAA	-36	NA	87361521	87366508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87361500_87366500
ES.11258.1	chr14	+	8329	1	Intergenic	novelGene_9379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	87368775	87377104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87368800_87377100
ES.11259.1	chr14	+	153	1	Intergenic	novelGene_9380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	87377226	87377379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87377200_87377400
ES.1126.1	chr1	+	2647	1	Genic_Genomic	ENSMUSG00000038866.16	novel	NA	NA	NA	NA	-9	-30215	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTACTCACTAAATCTAC	NA	False	NA	NA	False	AATAAA	-18	NA	105918126	105920773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_105918100_105920800
ES.1126.10	chr1	+	5675	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	34	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	21.9291789378647	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTATGCCTTATTGC	NA	False	NA	13	True	AATAAA	-17	NA	105918169	105961801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.11	chr1	+	5683	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	44	3	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTTATTGCAAGTTT	NA	False	NA	19	True	AATAAA	-23	NA	105918179	105961807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.12	chr1	+	3866	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	45	1885	45	-259	multi-exon	FALSE	canonical	3	33	junction_13	14.3605310511487	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTGTGGGGAGTCAT	NA	False	NA	NA	False	AGTAAA	-18	NA	105918180	105959919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.13	chr1	+	5463	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-44	-18	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	23.9629343408152	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918374	105961779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
ES.1126.14	chr1	+	4529	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	-41	1880	-41	-261	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCAAGTGTGGGGAGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	105918377	105959917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
ES.1126.15	chr1	+	5504	14	NNC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.324764058019	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAATTATGCCTTATTG	NA	False	NA	12	True	AATAAA	-16	NA	105918401	105961800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105919438_105928660_105928773_105931829_105931885_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.16	chr1	+	2249	1	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-16	-30337	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTAATAAGACTAATAC	NA	False	NA	NA	False	TATAAA	-15	NA	105918402	105920651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105918400_105920700
ES.1126.17	chr1	+	5458	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	22.4590677059895	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGAATTATGCCTTATT	NA	False	NA	11	True	AATAAA	-15	NA	105918411	105961799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
ES.1126.2	chr1	+	5823	14	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	17.8706728117763	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTTATTGCAAGTTT	NA	False	NA	19	True	AATAAA	-23	NA	105918126	105961807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
ES.1126.20	chr1	+	3440	13	NNC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	8	2026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	21.5786674493327	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTACCCTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	105918426	105957257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105955861
ES.1126.21	chr1	+	5350	15	NNC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	12	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1144838575663	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918430	105961779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105918635_105918760_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.22	chr1	+	6269	12	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	12	-18	intron_retention	FALSE	canonical	1	4	junction_6	24.1099410243648	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918430	105961779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481
ES.1126.23	chr1	+	3831	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	313	1652	30	-26	multi-exon	FALSE	canonical	3	33	junction_13	14.3605310511487	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGTGTGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	105918448	105960152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.24	chr1	+	6255	12	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	38	-18	intron_retention	FALSE	canonical	3	10	junction_3	22.3199869664348	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGAAAAACAG	NA	False	NA	-9	True	NA	NA	NA	105918456	105961779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481
ES.1126.25	chr1	+	3383	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	421	-26	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	22.4590677059895	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGTGTGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	105918839	105960152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
ES.1126.26	chr1	+	3676	14	NNC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	621	8064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.2225342363233	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTCACTTTTTATTG	NA	False	NA	NA	False	AATAGA	-21	NA	105919039	105969868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825_105959966_105969188
ES.1126.27	chr1	+	4472	8	ISM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	27357	9	6019	-2	3prime_fragment	FALSE	canonical	3	33	junction_7	11.4749060731561	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTAAGAATTATGCCT	NA	False	NA	7	True	AATAAA	-11	NA	105945492	105961795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.28	chr1	+	6703	1	Genic_Genomic	ENSMUSG00000038866.16	novel	NA	NA	NA	NA	18656	3028	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	105958129	105964832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_105958100_105964800
ES.1126.29	chr1	+	1666	1	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	19005	-34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGAAAACATTGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	105958478	105960144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105958500_105960100
ES.1126.3	chr1	+	5783	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	13	0	13	0	multi-exon	FALSE	canonical	3	33	junction_13	14.3605310511487	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGCCTTATTGCAAG	NA	False	NA	16	True	AATAAA	-20	NA	105918148	105961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.1126.4	chr1	+	6648	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	-270	-10	13	3	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTTATTGCAAGTTT	NA	False	NA	19	True	AATAAA	-23	NA	105918148	105961807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
ES.1126.5	chr1	+	6660	13	NIC	ENSMUSG00000038866.16	novel	6368	13	NA	NA	14	1	intron_retention	FALSE	canonical	3	22	junction_11	16.9016764454496	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGCCTTATTGCAAGT	NA	False	NA	17	True	AATAAA	-21	NA	105918149	105961805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481
ES.1126.6	chr1	+	6570	12	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	16	0	intron_retention	FALSE	canonical	3	10	junction_3	19.1988291654026	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGCCTTATTGCAAG	NA	False	NA	16	True	AATAAA	-20	NA	105918151	105961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
ES.1126.7	chr1	+	2185	1	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	19	-30649	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGTGGATCAGATC	NA	False	NA	NA	False	AGTAAA	-18	NA	105918154	105920339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105918200_105920300
ES.1126.8	chr1	+	4138	14	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	26	-21	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	17.8706728117763	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGCTTTTTTACACTG	NA	False	NA	NA	False	AAAACA	-4	NA	105918161	105960157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955117_105955262_105957481_105958964_105959825
ES.1126.9	chr1	+	3806	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	34	-258	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTGTGGGGAGTCATG	NA	False	NA	NA	False	AGTAAA	-19	NA	105918169	105959920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ES.11260.1	chr14	-	4653	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-61	-10	-50	10	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTCTCTTGCTCATA	NA	False	NA	NA	False	AATAAA	-34	NA	87378721	86892792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.10	chr14	-	4578	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	-14	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	54.2548773473531	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378685	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87378433
ES.11260.11	chr14	-	4518	28	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.8622917516342	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378667	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066569_87072391_87072503_87089544_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.13	chr14	-	4502	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	-7	4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	55.8337690229991	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378678	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.17	chr14	-	4348	29	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	1	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.1917772774597	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378599	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86893115_86893291_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.19	chr14	-	4470	27	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	54373	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.1767276110578	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87324206	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87313242_87313377_87324019
ES.11260.20	chr14	-	4039	25	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	54424	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.5791335154804	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87324155	86892802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219124_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87324019
ES.11260.25	chr14	-	2106	8	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	-72042	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	87.0660082691194	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87099367	86892802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87099189
ES.11260.27	chr14	-	4550	28	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	42.6759570646689	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGACGTATGTCTCTTC	NA	False	NA	NA	False	AATAAA	-23	NA	87378630	86892803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066596_87072416_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.37	chr14	-	4434	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-19	167	-8	-167	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAGGATTTCATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	87378679	86892969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.38	chr14	-	3886	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	30	666	-24	139	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATGTGTTCAACTGT	NA	False	NA	NA	False	ATTAAA	-30	NA	87378630	86893468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.39	chr14	-	3754	26	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	54289	139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.5204339725021	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATGTGTTCAACTGT	NA	False	NA	NA	False	ATTAAA	-30	NA	87324290	86893468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143368_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87324019
ES.11260.4	chr14	-	4337	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	9	4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	56.1237010761515	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378651	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.40	chr14	-	3783	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	27	135	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	55.8337690229991	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAGCCATGTGTTCAA	NA	False	NA	NA	False	ATTAAA	-26	NA	87378633	86893472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.41	chr14	-	3791	28	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	3	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.8622917516342	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAAGTTTTTGCATTA	NA	False	NA	NA	False	AGTAAA	-33	NA	87378668	86893592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072529_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.42	chr14	-	3784	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-2	800	-2	5	multi-exon	FALSE	non_canonical	0	0	junction_5	42.6759570646689	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTATGCTTGAAGT	NA	False	NA	NA	False	AGTAAA	-23	NA	87378662	86893602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.43	chr14	-	3511	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	-26	2	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	56.1237010761515	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTCCTGTATGCTTGA	NA	False	NA	NA	False	AGTAAA	-20	NA	87378632	86893605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.45	chr14	-	2448	1	Intergenic	novelGene_9370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-12	NA	87006337	87003889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_87003900_87006300
ES.11260.46	chr14	-	3409	27	ISM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-13	116689	-2	5	5prime_fragment	FALSE	non_canonical	0	0	junction_4	43.0116951207432	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTACCTGCTTTTATCC	NA	False	NA	NA	False	AATAAA	-23	NA	87378673	87009491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.48	chr14	-	3336	27	NNC	ENSMUSG00000022021.15	novel	3337	27	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	55.694180270261	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATGCTATTCTTACCTG	NA	False	NA	NA	False	AATAAA	-14	NA	87378619	87009500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87009582_87010042_87010139_87047771_87047908_87066427_87066593_87072413_87072529_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.49	chr14	-	4014	1	Intergenic	novelGene_9371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGGTACTAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	87034250	87030236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_87030200_87034200
ES.11260.50	chr14	-	5958	26	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	-18	14649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.7106871064365	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTATTCAGTAAATTCA	NA	False	NA	NA	False	AATAAA	-25	NA	87378624	87033193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87036034_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206968_87216083_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.51	chr14	-	6009	26	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	-17	14645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.1945762507379	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCTGTATTCAGTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	87378623	87033197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87036034_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.52	chr14	-	4677	25	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	-23	4733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.3490080765032	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGTCTTTACGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	87378629	87043109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87044710_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.53	chr14	-	4778	26	NNC	ENSMUSG00000022021.15	novel	3046	24	NA	NA	-24	4731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.4425938454285	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTTTAGTCTTTACGT	NA	False	NA	NA	False	AATAAA	-18	NA	87378630	87043111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87044710_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.54	chr14	-	5343	25	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	50098	2187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	80.3932068543937	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCGAAACCCACTCG	NA	False	NA	NA	False	NA	NA	NA	87328481	87045655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87047908_87066427_87066591_87072410_87072538_87074061_87074226_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87153926_87154149_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413
ES.11260.55	chr14	-	5308	25	ISM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	-17	152888	-6	2152	5prime_fragment	FALSE	non_canonical	0	0	junction_2	44.5059101880488	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87378677	87045690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.56	chr14	-	4594	22	NNC	ENSMUSG00000022021.15	novel	2090	16	NA	NA	-24	-50171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.8041221511539	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTACAATTATACCTTAA	NA	False	NA	NA	False	NA	NA	NA	87378630	87098013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87099984_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.57	chr14	-	550	1	Intergenic	novelGene_9372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCCATTGTTCCATCT	NA	False	NA	NA	False	AAGAAA	-13	NA	87099569	87099019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_87099000_87099600
ES.11260.58	chr14	-	4896	1	Intergenic	novelGene_9374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACAGCTGTTTGGCTGA	NA	False	NA	NA	False	NA	NA	NA	87163992	87159096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_87159100_87164000
ES.11260.59	chr14	-	1735	14	NNC	ENSMUSG00000022021.15	novel	2090	16	NA	NA	54342	-926	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	53.7996502485277	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAATTTAAGCCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	87324237	87203812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87324019
ES.11260.7	chr14	-	4516	28	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.8622917516342	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378599	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072529_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11260.8	chr14	-	4422	26	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	54287	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.772197326746	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87324292	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87324019
ES.11260.9	chr14	-	4232	25	NNC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.7695108232472	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTATGTCTCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-28	NA	87378598	86892798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_86894019_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222332_87223052_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ES.11261.1	chr14	+	197	1	Intergenic	novelGene_9381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGGTCTATTTAATAAC	NA	False	NA	NA	False	NA	NA	NA	87652435	87652632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87652400_87652600
ES.11262.1	chr14	+	5956	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-676	0	-676	0	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTGTTTTTATTACAA	NA	False	NA	NA	False	ATTAAA	-22	NA	87653398	87752202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.12	chr14	+	4180	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-16	1116	-16	-1116	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGGTTTTGCCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	87654058	87751086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.13	chr14	+	2596	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	1	2683	1	-2683	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCCAAAAGTTGTCAAAT	NA	False	NA	NA	False	TTTAAA	-13	NA	87654075	87749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.15	chr14	+	5208	11	NIC	ENSMUSG00000022019.17	novel	5280	12	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.9948328883493	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAACTTTTGTTTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	87654075	87752197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_87654285_87694469_87694555_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.16	chr14	+	5264	13	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	9	4443	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	28.009918878061	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTTAAGTTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	87654083	87756645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87753656
ES.11262.17	chr14	+	4698	12	NNC	ENSMUSG00000022019.17	novel	5280	12	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.4290012691984	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTTGAACTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	87654085	87752193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87743481_87749080
ES.11262.18	chr14	+	2595	3	ISM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	163	53547	136	-19617	5prime_fragment	FALSE	canonical	3	105	junction_2	4	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGGGGAAGCCATGAGT	NA	False	NA	NA	False	NA	NA	NA	87654237	87698655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_87654285_87694469_87694555_87696192
ES.11262.19	chr14	+	6907	1	FSM	ENSMUSG00000115564.2	ENSMUST00000226140.2	966	1	-201	-5740	-201	5740	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87665584	87672491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87665600_87672500
ES.11262.2	chr14	+	3371	15	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	-566	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.8778668719394	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCTCTGGTTCACTT	NA	False	NA	4	True	AATAAA	-18	NA	87653508	87782937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724533_87724724_87743194_87744043_87749080_87749207_87760875_87760963_87776832_87776958_87782692
ES.11262.20	chr14	+	5124	12	NNC	ENSMUSG00000022019.17	novel	636	7	NA	NA	-10494	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.6766859155085	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTTGAACTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	87684022	87752193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87684122_87694469_87694555_87696192_87696259_87709511_87709636_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724596_87724724_87743194_87744043_87749080
ES.11262.21	chr14	+	2296	11	ISM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	55435	2	167	0	3prime_fragment	FALSE	canonical	3	57	junction_9	15.7990506043876	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTCTGGTTCACTTG	NA	False	NA	5	True	AATAAA	-19	NA	87709509	87782938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
ES.11262.22	chr14	+	176	1	Intergenic	novelGene_9382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	87716721	87716897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87716700_87716900
ES.11262.23	chr14	+	4549	6	ISM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	64092	-2	8824	2	3prime_fragment	FALSE	canonical	3	80	junction_3	8.07465169527454	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTTTTTATTACAACT	NA	False	NA	NA	False	ATTAAA	-24	NA	87718166	87752204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.24	chr14	+	4724	4	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	15272	5095	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	46.7332857821917	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCAAGTGCTCCTTGCA	NA	False	NA	NA	False	AATAAA	-11	NA	87724614	87757297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87724724_87743194_87744043_87749080_87749207_87753656
ES.11262.25	chr14	+	999	3	NNC	ENSMUSG00000022019.17	novel	669	2	NA	NA	-16200	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTCTGGTTCACTTG	NA	False	NA	5	True	AATAAA	-19	NA	87760334	87782938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87760963_87776832_87776958_87782692
ES.11262.26	chr14	+	10858	2	FSM	ENSMUSG00000022019.17	ENSMUST00000227304.2	669	2	-10183	-6	-10183	4	multi-exon	FALSE	canonical	3	58	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTTCACTTGTCTGTT	NA	False	NA	11	True	AATAAA	-25	NA	87766351	87782944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87776958_87782692
ES.11262.3	chr14	+	3168	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	-508	-3	-508	3	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGTTCACTTGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	87653566	87782943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
ES.11262.4	chr14	+	6104	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-389	-435	-389	435	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTTATTTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	87653685	87752637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.5	chr14	+	4277	13	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	-247	3200	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	28.009918878061	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCCAGAACCTCATCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	87653827	87755402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87753656
ES.11262.8	chr14	+	5278	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	-208	210	-208	-210	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAATGTTTTTCTCATG	NA	False	NA	NA	False	AATAAA	-21	NA	87653866	87751992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11262.9	chr14	+	4299	12	NNC	ENSMUSG00000022019.17	novel	5280	12	NA	NA	-168	-1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.3353367710527	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGCCATTCTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	87653906	87751090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709636_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ES.11263.1	chr14	+	3773	4	Intergenic	novelGene_9383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTATCTAATTTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	87785337	87793432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_87785518_87787734_87787919_87788764_87791972_87793230
ES.11264.1	chr14	-	2269	1	Intergenic	novelGene_9384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTGAAGATAGC	NA	False	NA	NA	False	NA	NA	NA	88059391	88057122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_88057100_88059400
ES.11265.1	chr14	-	869	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	-25	-52	-25	52	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTGATGT	NA	False	NA	NA	False	AATAAA	-21	NA	88361269	88360400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_88360400_88361300
ES.11266.1	chr14	+	276	1	Intergenic	novelGene_9385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAATCATGAATTAAA	NA	False	NA	NA	False	NA	NA	NA	89163653	89163929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_89163700_89163900
ES.11267.1	chr14	-	177	1	Intergenic	novelGene_9386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTTAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	89342953	89342776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_89342800_89343000
ES.11268.1	chr14	-	176	1	Intergenic	novelGene_9387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAACTTTTG	NA	False	NA	NA	False	NA	NA	NA	89628025	89627849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_89627800_89628000
ES.11269.1	chr14	-	174	1	Intergenic	novelGene_9388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTGGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	89930360	89930186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_89930200_89930400
ES.1127.1	chr1	-	2911	1	Antisense	novelGene_ENSMUSG00000038866.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAATCTAAGTATACA	NA	False	NA	NA	False	NA	NA	NA	105956990	105954079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_105954100_105957000
ES.11270.1	chr14	-	239	1	FSM	ENSMUSG00000062093.6	ENSMUST00000228705.2	3220	1	2983	-2	2002	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGAGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	90133900	90133661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_90133700_90133900
ES.11271.1	chr14	-	106	1	FSM	ENSMUSG00000062093.6	ENSMUST00000228705.2	3220	1	149	2965	149	-2617	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	5	True	AATACA	-18	NA	90136734	90136628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_90136600_90136700
ES.11272.1	chr14	-	1447	1	Intergenic	novelGene_9389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTCTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	90317383	90315936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_90315900_90317400
ES.11272.2	chr14	-	1417	2	NNC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-14852	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAAGTGCATTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	90322672	90317050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_90318195_90322399
ES.11272.3	chr14	-	4455	1	Intergenic	novelGene_9390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTCATCTCTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	90321517	90317062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_90317100_90321500
ES.11272.4	chr14	-	716	2	NNC	ENSMUSG00000115313.2	novel	429	3	NA	NA	656	-15553	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAATCTACTGTTATG	NA	False	NA	NA	False	NA	NA	NA	90322672	90317751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_90318195_90322399
ES.11273.1	chr14	-	3744	2	Intergenic	novelGene_9391	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACACATTAAAGCAATC	NA	False	NA	NA	False	NA	NA	NA	93453699	93449313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_93452552_93453193
ES.11274.1	chr14	-	181	1	Intergenic	novelGene_9392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGATAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	93941985	93941804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_93941800_93942000
ES.11275.1	chr14	-	196	1	Intergenic	novelGene_9393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGCATAAACTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	93969518	93969322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_93969300_93969500
ES.11276.1	chr14	-	3649	3	Intergenic	novelGene_9394	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCATTGAATTTAACTAA	NA	False	NA	NA	False	AATAAA	-17	NA	94168457	94145678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_94149108_94153430_94153519_94168325
ES.11277.1	chr14	-	269	1	Intergenic	novelGene_9395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAACACACTCAAATAA	NA	False	NA	NA	False	AATAAA	-33	NA	94527546	94527277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_94527300_94527500
ES.11278.1	chr14	+	172	1	Intergenic	novelGene_9396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAACACTACA	NA	False	NA	NA	False	NA	NA	NA	95788881	95789053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_95788900_95789100
ES.11279.1	chr14	-	3795	5	Intergenic	novelGene_9397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATAGTTTGTTCTGCA	NA	False	NA	NA	False	AATAAA	-23	NA	95898532	95859945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_95863274_95863493_95863560_95894674_95894775_95898109_95898293_95898414
ES.11279.2	chr14	-	3691	5	Intergenic	novelGene_9398	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	95898481	95859983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_95863274_95863493_95863560_95894689_95894775_95898109_95898293_95898414
ES.1128.1	chr1	+	180	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACACTGT	NA	False	NA	NA	False	NA	NA	NA	105971970	105972150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_105972000_105972200
ES.11280.1	chr14	-	136	1	Intergenic	novelGene_9399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	95975335	95975199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_95975200_95975300
ES.11281.1	chr14	+	1713	3	Antisense	novelGene_ENSMUSG00000022076.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAATAAAGACTATA	NA	False	NA	NA	False	NA	NA	NA	96345182	96356147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_96345261_96347378_96347551_96354684
ES.11282.1	chr14	-	178	1	Intergenic	novelGene_9400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAAGCAACATG	NA	False	NA	NA	False	NA	NA	NA	96425470	96425292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_96425300_96425500
ES.11283.1	chr14	-	2676	1	Intergenic	novelGene_9401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGGATTATGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	97616840	97614164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_97614200_97616800
ES.11284.1	chr14	+	177	1	Intergenic	novelGene_9402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAGATC	NA	False	NA	NA	False	NA	NA	NA	99186987	99187164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99187000_99187200
ES.11285.1	chr14	+	178	1	Intergenic	novelGene_9403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGTCAGCCCA	2842	False	NA	NA	False	NA	NA	NA	99229011	99229189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99229000_99229200
ES.11286.1	chr14	+	207	1	Intergenic	novelGene_9404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCTCCGGCATAGAA	6770	False	NA	NA	False	NA	NA	NA	99232939	99233146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99232900_99233100
ES.11287.1	chr14	+	1334	1	Antisense	novelGene_ENSMUSG00000033186.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAAAACATAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	99273638	99274972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_99273600_99275000
ES.11288.1	chr14	+	2898	12	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	93.6248006982398	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283666	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310212_99311081
ES.11288.10	chr14	+	2659	11	NIC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	96.6821596779882	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283832	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99284736_99284905_99287428_99287536_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.11	chr14	+	2061	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	20	645	20	-644	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCTTGTTTAACAAGTA	NA	False	NA	16	True	AATAAA	-20	NA	99283832	99311331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.12	chr14	+	5880	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	21	0	intron_retention	FALSE	canonical	3	218	junction_1	50.785923246506	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283833	99311976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.13	chr14	+	2298	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	21	407	21	-406	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGGGGAAATTACT	NA	False	NA	27	True	AGTAAA	-20	NA	99283833	99311569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.14	chr14	+	3370	11	NIC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	24	0	intron_retention	FALSE	canonical	3	218	junction_1	49.7723819000055	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283836	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.15	chr14	+	1937	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	26	-645	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	91.9262190676094	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGCTTGTTTAACAAGT	NA	False	NA	15	True	AATAAA	-19	NA	99283838	99311330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310068_99311081
ES.11288.16	chr14	+	2688	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.4175685955905	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCGTTTTCCTTGTTCT	NA	False	NA	3	True	AATAAA	-14	NA	99283857	99311974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287419_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.17	chr14	+	4865	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	114.637350903718	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283859	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99288662_99288825_99288928_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.18	chr14	+	2548	10	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-30	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	101.637700791696	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTCGTTTTCCTTGTTC	NA	False	NA	2	True	AATAAA	-13	NA	99283859	99311973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99284736_99284905_99287428_99287536_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.19	chr14	+	2705	12	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	92.8183153769852	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283859	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298928_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.2	chr14	+	2857	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	-124	-7	31	7	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTCTGTATGGTAC	NA	False	NA	12	True	AATAAA	-23	NA	99283688	99311983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.20	chr14	+	2840	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	115.152405050389	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283859	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99288662_99288825_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.21	chr14	+	2588	11	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-30	-642	intron_retention	FALSE	canonical	2	7	junction_10	95.7724386240635	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTTGTTTAACAAGTAAA	NA	False	NA	18	True	AATAAA	-22	NA	99283859	99311333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310068_99311081
ES.11288.22	chr14	+	2521	10	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-29	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	104.134528375559	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGTCGTTTTCCTTGTT	NA	False	NA	1	True	AATAAA	-12	NA	99283860	99311972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99284736_99284905_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.23	chr14	+	3378	14	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	-29	-438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.857238561054	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAGTAAAATGGACT	NA	False	NA	-5	True	TATAAA	-13	NA	99283860	99311537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99301769_99302978_99304107_99304156_99305443_99305998_99310037_99310068_99311081
ES.11288.26	chr14	+	2247	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-10	-438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	92.8183153769852	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAGTAAAATGGACT	NA	False	NA	-5	True	TATAAA	-13	NA	99283879	99311537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298928_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.27	chr14	+	2487	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	97.5676688252825	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCGTTTTCCTTGTTCT	NA	False	NA	3	True	AATAAA	-14	NA	99283881	99311974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99284117_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.28	chr14	+	2693	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	114.968926961448	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283881	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99292444_99292482_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.29	chr14	+	817	2	FSM	ENSMUSG00000022070.8	ENSMUST00000226823.2	1071	2	226	28	-6	-28	multi-exon	FALSE	canonical	3	218	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGAGCAAAGTCCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	99283883	99285320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99284117_99284736
ES.11288.3	chr14	+	2562	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	90.4921727738556	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283813	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305672_99305833_99305998_99310037_99310185_99311081
ES.11288.30	chr14	+	4924	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	94.0426314440723	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGTCGTTTTCCTTGTT	NA	False	NA	1	True	AATAAA	-12	NA	99283901	99311972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99288662_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.31	chr14	+	5010	9	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	4277	1	4174	0	3prime_fragment	FALSE	canonical	3	218	junction_3	45.7595618423079	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99288089	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.32	chr14	+	6366	3	NNC	ENSMUSG00000022070.8	novel	704	7	NA	NA	10226	2232	intron_retention	FALSE	non_canonical	0	0	junction_2	165.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99294141	99301210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99298468_99298955_99299985_99300199
ES.11288.33	chr14	+	1836	6	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	14069	646	13966	-645	3prime_fragment	FALSE	canonical	3	315	junction_3	8.00999375780031	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGCTTGTTTAACAAGT	3123	False	NA	15	True	AATAAA	-19	NA	99297881	99311330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.34	chr14	+	1862	1	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	15433	2232	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	381	False	NA	NA	False	NA	NA	NA	99299348	99301210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99299300_99301200
ES.11288.4	chr14	+	2741	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_6	85.6688801420527	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTCGTTTTCCTTGTTC	NA	False	NA	2	True	AATAAA	-13	NA	99283818	99311973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297766_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ES.11288.5	chr14	+	758	3	NNC	ENSMUSG00000022070.8	novel	704	7	NA	NA	13	-28	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	107.5	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGAGCAAAGTCCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	99283825	99285320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99285021
ES.11288.6	chr14	+	2577	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.6555675098657	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283828	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305702_99305833_99305998_99310037_99310185_99311081
ES.11288.7	chr14	+	5993	12	NNC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_11	117.473612299856	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283828	99311976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99284117_99284736_99284905_99287428_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305672_99305833_99305998_99310037_99310212_99311081
ES.11288.8	chr14	+	2348	13	NNC	ENSMUSG00000022070.8	novel	3834	13	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	114.703240291342	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTCGTTTTCCTTGTTC	NA	False	NA	2	True	AATAAA	-13	NA	99283829	99311973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99283921_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305672_99305833_99305998_99310037_99310185_99311081
ES.11288.9	chr14	+	3602	11	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	20	1	20	0	intron_retention	FALSE	canonical	3	218	junction_1	52.1736523544212	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGTTTTCCTTGTTCTG	NA	False	NA	4	True	AATAAA	-15	NA	99283832	99311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037
ES.11289.1	chr14	+	3023	17	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-488	11413	-5	0	5prime_fragment	FALSE	canonical	2	66	junction_8	17.3285124505827	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTTTTAAACTAATT	NA	False	NA	NA	False	AATATA	-18	NA	99336854	99480516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274
ES.11289.10	chr14	+	2954	19	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	38.0946271445719	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGACTGTAGAGTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	99337336	99491928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99465288_99465441_99480274_99480446_99491596
ES.11289.11	chr14	+	2683	17	NIC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	31.7120220697136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	15	True	AATAAA	-17	NA	99337336	99491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ES.11289.12	chr14	+	964	4	FSM	ENSMUSG00000022064.11	ENSMUST00000228246.2	1546	4	478	104	-5	-104	multi-exon	FALSE	canonical	3	99	junction_3	7.25718035235908	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAGACTGAAGTTGGCT	NA	False	NA	NA	False	AGTAAA	-24	NA	99337337	99345096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734
ES.11289.13	chr14	+	2995	19	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.0469576662093	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGACTGTAGAGTTTTT	NA	False	NA	14	True	AATAAA	-16	NA	99337337	99491928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99341243_99341438_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ES.11289.14	chr14	+	4560	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-4	30587	-4	228	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATTGTCAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	99337338	99461342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
ES.11289.15	chr14	+	2650	17	NIC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	32.1653443165156	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	15	True	AATAAA	-17	NA	99337338	99491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ES.11289.17	chr14	+	2421	16	NIC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	32.0808700353064	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTGTTTTAAACT	NA	False	NA	NA	False	AATATA	-14	NA	99337351	99480512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274
ES.11289.18	chr14	+	2865	18	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	3	602	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	30.2365529607476	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTCCTGTTGATTATAA	NA	False	NA	NA	False	AGTAAA	-17	NA	99337369	99481118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99480690
ES.11289.2	chr14	+	4823	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-488	30808	-5	7	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAACTCTGTGGGAA	NA	False	NA	NA	False	AATAAA	-23	NA	99336854	99461121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
ES.11289.20	chr14	+	2255	15	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-3	-4634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	40.7293831657346	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	99337377	99487295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99448375_99448507_99458994_99459080_99480274_99480446_99487124
ES.11289.21	chr14	+	5516	18	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-3	3261	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	30.2365529607476	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAAAGAACTTATGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	99337377	99483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99480690
ES.11289.22	chr14	+	5740	17	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-3	3264	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	29.9280386928379	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAACTTATGTGAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	99337377	99483780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374636_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274
ES.11289.23	chr14	+	4235	9	ISM	ENSMUSG00000022064.11	ENSMUST00000228354.2	2653	11	0	36971	0	29251	5prime_fragment	FALSE	canonical	2	66	junction_8	18.9868375460475	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGACAATTTACGTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	99337380	99380904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972
ES.11289.24	chr14	+	5762	17	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	39	8147	1	3266	5prime_fragment	FALSE	canonical	2	66	junction_8	17.3285124505827	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTTATGTGAGTGGT	NA	False	NA	NA	False	AATAAA	-20	NA	99337381	99483782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274
ES.11289.25	chr14	+	1533	6	ISM	ENSMUSG00000022064.11	ENSMUST00000228354.2	2653	11	6	46543	6	19679	5prime_fragment	FALSE	canonical	3	99	junction_3	7.30479294709987	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACATTTTATAATT	NA	False	NA	NA	False	AATAAA	-11	NA	99337386	99371332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671
ES.11289.26	chr14	+	6588	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	44	28511	6	2304	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTTCCATCAGAGCAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	99337386	99463418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
ES.11289.27	chr14	+	1851	11	NIC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	37.1084895947006	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	15	True	AATAAA	-17	NA	99337390	99491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99491596
ES.11289.28	chr14	+	161	1	Intergenic	novelGene_9407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAGATCTCAATT	6429	False	NA	NA	False	NA	NA	NA	99345586	99345747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99345600_99345700
ES.11289.29	chr14	+	4036	1	Intergenic	novelGene_9408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGATTTTTAAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	99391893	99395929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99391900_99395900
ES.11289.3	chr14	+	2816	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-17	-2	-17	2	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTAGAGTTTTTATA	NA	False	NA	17	True	AATAAA	-19	NA	99337325	99491931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ES.11289.30	chr14	+	249	1	Intergenic	novelGene_9409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATCCCCAGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	99408850	99409099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99408800_99409100
ES.11289.31	chr14	+	6703	1	Intergenic	novelGene_9411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTGTGCGTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	99473400	99480103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99473400_99480100
ES.11289.32	chr14	+	173	1	Intergenic	novelGene_9412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	99481582	99481755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99481600_99481800
ES.11289.33	chr14	+	364	1	Intergenic	novelGene_9413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	99481585	99481949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99481600_99481900
ES.11289.34	chr14	+	980	1	Intergenic	novelGene_9414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGTTTCTCTATAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	99482650	99483630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99482600_99483600
ES.11289.4	chr14	+	3559	16	ISM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	-10	31594	-10	-779	5prime_fragment	FALSE	canonical	2	66	junction_8	17.8940089291236	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGTGTCAATATGTAAA	NA	False	NA	NA	False	NA	NA	NA	99337332	99460335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
ES.11289.6	chr14	+	5438	18	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-7	3269	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	37.8006059891742	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTATGTGAGTGGTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	99337335	99483785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338610_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99480690
ES.11289.7	chr14	+	3988	13	NIC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	35.0985715125591	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAAGTCTGTCAACTC	NA	False	NA	NA	False	AATAAA	-15	NA	99337336	99461113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99448375_99448507_99458994
ES.11289.8	chr14	+	3089	4	NIC	ENSMUSG00000022064.11	novel	1993	5	NA	NA	-6	1140	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.9565484926248	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTAGGTTTGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	99337336	99352793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99337566_99338464_99338738_99344734_99344934_99350405
ES.11289.9	chr14	+	2686	18	NNC	ENSMUSG00000022064.11	novel	2797	18	NA	NA	-6	-4589	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	29.8465510402214	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGATCTCTCTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	99337336	99487340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99487124
ES.1129.1	chr1	+	175	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAAAGTTGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	106065802	106065977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_106065800_106066000
ES.11290.1	chr14	-	2695	5	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	-189	126470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	408.61740968784	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTATTTGCCTAGCAGT	NA	False	NA	NA	False	NA	NA	NA	99283759	99145509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99145532_99271695_99271753_99271806_99273947_99277950_99278097_99283429
ES.11290.10	chr14	-	2492	4	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	-9	284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.421270242777	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGACAATTCAGATAAATA	NA	False	NA	NA	False	GATAAA	-2	NA	99283579	99271695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99271753_99271807_99273947_99277950_99278097_99283429
ES.11290.11	chr14	-	2481	4	NNC	ENSMUSG00000033186.10	novel	952	3	NA	NA	-16	284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.182881509964	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGACAATTCAGATAAATA	NA	False	NA	NA	False	GATAAA	-2	NA	99283586	99271695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99271753_99271806_99273947_99277950_99278097_99283448
ES.11290.12	chr14	-	2465	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-202	-23	-188	23	multi-exon	FALSE	canonical	3	792	junction_1	24.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCTGTGGGTTCAGTT	NA	False	NA	NA	False	AATAAA	-41	NA	99283758	99271956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283429
ES.11290.13	chr14	-	6220	2	ISM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	1350	3	1182	-3	3prime_fragment	FALSE	canonical	3	792	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTCCTTTTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	99282206	99271982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_99273947_99277950
ES.11290.14	chr14	-	2247	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	-57	-1238	-16	-4	multi-exon	FALSE	canonical	3	18	junction_2	387	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCCTTGTCCTTTTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	99283586	99271983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283448
ES.11290.15	chr14	-	6152	2	NIC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	61	-4	intron_retention	FALSE	canonical	3	841	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCCTTGTCCTTTTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	99283468	99271983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99278097_99283429
ES.11290.16	chr14	-	11567	1	NIC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	5	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCCTTGTCCTTTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	99283551	99271984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99272000_99283600
ES.11290.17	chr14	-	2093	2	FSM	ENSMUSG00000033186.10	ENSMUST00000228445.2	818	2	9	-1284	-5	-6	multi-exon	FALSE	canonical	1	2	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGCCTTGTCCTTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	99283561	99271985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99283429
ES.11290.18	chr14	-	2181	3	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	417.5	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGCCTTGTCCTTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	99283520	99271985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99273947_99277967_99278097_99283429
ES.11290.2	chr14	-	284	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	158	7	158	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATTTTTATTTA	NA	False	NA	-8	True	ATTAAA	-20	NA	99231596	99231312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99231300_99231600
ES.11290.20	chr14	-	1333	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-15	922	-1	320	multi-exon	FALSE	canonical	3	792	junction_1	24.5	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGGATGGAGTTGCT	NA	False	NA	NA	False	ATTAAA	-40	NA	99283571	99272901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283429
ES.11290.21	chr14	-	1319	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	-48	-319	-7	319	multi-exon	FALSE	canonical	3	18	junction_2	387	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCTGGATGGAGTTGC	NA	False	NA	NA	False	ATTAAA	-39	NA	99283577	99272902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283448
ES.11290.22	chr14	-	1149	2	FSM	ENSMUSG00000033186.10	ENSMUST00000228445.2	818	2	12	-343	-2	295	multi-exon	FALSE	canonical	1	2	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGATGGTCAAAGATAA	NA	False	NA	NA	False	ATTAAA	-15	NA	99283558	99272926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99283429
ES.11290.23	chr14	-	706	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-5	1539	-5	186	multi-exon	FALSE	canonical	3	792	junction_1	24.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGGCTGTGTGTTCC	NA	False	NA	NA	False	TATAAA	-26	NA	99283561	99273518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283429
ES.11290.3	chr14	-	3059	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-9	-810	5	810	multi-exon	FALSE	canonical	3	792	junction_1	24.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTGTTTTCCTTGTT	NA	False	NA	NA	False	AATGAA	-3	NA	99283565	99271169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283429
ES.11290.5	chr14	-	2834	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	-60	-534	-46	534	multi-exon	FALSE	canonical	3	792	junction_1	24.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACCTGCCATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	99283616	99271445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99273947_99277950_99278097_99283429
ES.11290.7	chr14	-	2597	4	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	16	489	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.421270242777	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATGAGTTCTAGTGA	NA	False	NA	NA	False	AATATA	-9	NA	99283513	99271490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99271702_99271790_99273947_99277950_99278097_99283429
ES.11290.8	chr14	-	6704	2	NIC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	-14	432	intron_retention	FALSE	canonical	3	841	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTTCCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	99283584	99271547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99278097_99283429
ES.11290.9	chr14	-	2522	4	NNC	ENSMUSG00000033186.10	novel	2240	3	NA	NA	5	376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.421270242777	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGAACATTTCCCA	NA	False	NA	NA	False	CATAAA	-17	NA	99283551	99271603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99271702_99271790_99273947_99277950_99278097_99283429
ES.11291.1	chr14	-	180	1	Intergenic	novelGene_9405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	99300192	99300012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99300000_99300200
ES.11292.1	chr14	-	8138	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	55	-3043	25	3043	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATCGAATTCTTCATAG	2582	False	NA	NA	False	AATAAA	-16	NA	99337151	99309598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.11	chr14	-	5832	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	16	-15	intron_retention	FALSE	canonical	3	393	junction_12	28.5575668788288	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAACCAGC	2573	False	NA	NA	False	NA	NA	NA	99337160	99312656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.12	chr14	-	4589	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	28	182	intron_retention	FALSE	canonical	3	393	junction_12	28.5575668788288	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTTTTTCAGCTTTC	2585	False	NA	NA	False	AATACA	-19	NA	99337148	99313887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.13	chr14	-	4477	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-9	3	intron_retention	FALSE	canonical	3	393	junction_12	28.5575668788288	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGCCAGATTGCCC	2518	False	NA	NA	False	ATTAAA	-20	NA	99337215	99314066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.14	chr14	-	3708	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	17	1425	11	3	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGCCAGATTGCCC	2544	False	NA	NA	False	ATTAAA	-20	NA	99337189	99314066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.15	chr14	-	3435	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	0	1715	0	-287	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTACCGTGGTCCTCCG	2527	False	NA	NA	False	NA	NA	NA	99337206	99314356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.16	chr14	-	3333	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	52	209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	127.858020747186	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTCAGCGTTTGGCA	2609	False	NA	NA	False	NA	NA	NA	99337124	99314442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336275_99336554_99336623_99336881
ES.11292.17	chr14	-	3281	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	51	1818	21	192	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCTTTCTAAATCTTCA	2578	False	NA	NA	False	AAAACA	-44	NA	99337155	99314459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.18	chr14	-	3145	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	56	1949	26	61	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATCTGTGATGATCAT	2583	False	NA	NA	False	NA	NA	NA	99337150	99314590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.19	chr14	-	3376	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-1	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	150.943698112906	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAGATCTGTGATGAT	2532	False	NA	NA	False	NA	NA	NA	99337201	99314593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323663_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.2	chr14	-	3605	2	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	2738	3037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATACTCATCGAATTCT	NA	False	NA	NA	False	AATAAA	-10	NA	99313381	99309604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99310346_99310517
ES.11292.20	chr14	-	4787	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	12	58	intron_retention	FALSE	canonical	3	37	junction_18	126.917907029125	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAGATCTGTGATGAT	2545	False	NA	NA	False	NA	NA	NA	99337188	99314593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.22	chr14	-	3651	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	-554	2053	-554	11	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTGACTGAATCTATC	1973	False	NA	0	True	AATACA	-35	NA	99337760	99314694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.23	chr14	-	4697	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-3	7	intron_retention	FALSE	canonical	3	37	junction_18	126.917907029125	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTTGCTGACTGAATC	2530	False	NA	-4	True	AATACA	-31	NA	99337203	99314698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.24	chr14	-	4738	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	393	junction_12	29.2441827073731	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2518	False	NA	-15	True	AATACA	-20	NA	99337215	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99336277_99336881
ES.11292.25	chr14	-	3803	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	393	junction_12	28.5575668788288	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2549	False	NA	-15	True	AATACA	-20	NA	99337184	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.26	chr14	-	4784	20	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-10	-4	intron_retention	FALSE	canonical	0	0	junction_8	156.325340838796	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2547	False	NA	-15	True	AATACA	-20	NA	99337186	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323663_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.27	chr14	-	2920	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-57	-4	combination_of_known_junctions	FALSE	canonical	2	11	junction_21	129.308416843865	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2900	False	NA	-15	True	AATACA	-20	NA	99336833	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336738
ES.11292.28	chr14	-	3868	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	19	-4	intron_retention	FALSE	canonical	2	5	junction_12	153.160047009656	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2576	False	NA	-15	True	AATACA	-20	NA	99337157	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327082_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.29	chr14	-	3317	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	133.003162630974	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2550	False	NA	-15	True	AATACA	-20	NA	99337183	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314868_99314971_99315264_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.3	chr14	-	5617	1	Genic_Genomic	ENSMUSG00000033166.12	novel	NA	NA	NA	NA	898	3037	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATACTCATCGAATTCT	NA	False	NA	NA	False	AATAAA	-10	NA	99315221	99309604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_99309600_99315200
ES.11292.30	chr14	-	3837	21	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	37	junction_19	125.170883195734	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2549	False	NA	-15	True	AATACA	-20	NA	99337184	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.31	chr14	-	4570	19	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-8	-4	intron_retention	FALSE	canonical	2	5	junction_11	105.863366983748	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2549	False	NA	-15	True	AATACA	-20	NA	99337184	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327082_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.32	chr14	-	3128	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	122.265648850725	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2549	False	NA	-15	True	AATACA	-20	NA	99337184	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.33	chr14	-	6085	17	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	15	-4	intron_retention	FALSE	canonical	3	393	junction_11	29.0183131832297	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2572	False	NA	-15	True	AATACA	-20	NA	99337161	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020
ES.11292.34	chr14	-	5174	18	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	12	-4	intron_retention	FALSE	canonical	3	423	junction_15	24.5215814840216	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTTTATTGAGTTG	2545	False	NA	-15	True	AATACA	-20	NA	99337188	99314709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118
ES.11292.35	chr14	-	2142	17	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	7525	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	151.441394914832	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCATTTTTATTGAG	NA	False	NA	-18	True	AATACA	-17	NA	99328841	99314712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314868_99314971_99315075_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763
ES.11292.38	chr14	-	4783	18	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	0	-9	intron_retention	FALSE	canonical	1	2	junction_9	110.203586374614	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGCATTTTTATTG	2533	False	NA	-20	True	AATACA	-15	NA	99337200	99314714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323546_99324824_99324927_99325169_99325287_99326197_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.39	chr14	-	3052	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	101.418575714708	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2522	False	NA	-21	True	AATACA	-14	NA	99337211	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327082_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.4	chr14	-	7585	10	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-9709	1837	intron_retention	FALSE	canonical	3	427	junction_8	25.6115328960207	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	99325828	99310804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169
ES.11292.40	chr14	-	4638	20	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-10	intron_retention	FALSE	canonical	0	0	junction_10	155.508797659761	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2528	False	NA	-21	True	AATACA	-14	NA	99337205	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325243_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.41	chr14	-	5307	18	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-10	intron_retention	FALSE	canonical	3	415	junction_17	25.9249649224136	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2544	False	NA	-21	True	AATACA	-14	NA	99337189	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.42	chr14	-	3179	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	102.848966936961	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2539	False	NA	-21	True	AATACA	-14	NA	99337194	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323663_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.43	chr14	-	2921	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	137.488354052261	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2518	False	NA	-21	True	AATACA	-14	NA	99337215	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316698_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327082_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.45	chr14	-	3041	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.369477873046	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2528	False	NA	-21	True	AATACA	-14	NA	99337205	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314868_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.46	chr14	-	3819	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	147.996659887541	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2544	False	NA	-21	True	AATACA	-14	NA	99337189	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314868_99314971_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.48	chr14	-	3751	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	98.8100576864522	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2544	False	NA	-21	True	AATACA	-14	NA	99337189	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314868_99314971_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.49	chr14	-	3875	21	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	6	-10	intron_retention	FALSE	canonical	3	37	junction_19	124.511485413997	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2539	False	NA	-21	True	AATACA	-14	NA	99337194	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.5	chr14	-	5172	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	122.265648850725	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCTATGCTGAATGT	2573	False	NA	NA	False	NA	NA	NA	99337160	99312641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.50	chr14	-	7580	16	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-10	intron_retention	FALSE	canonical	3	415	junction_15	26.9077436190155	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2528	False	NA	-21	True	AATACA	-14	NA	99337205	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.51	chr14	-	4592	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	393	junction_11	28.7967011999639	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2550	False	NA	-21	True	AATACA	-14	NA	99337183	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.52	chr14	-	5243	18	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	28	-10	intron_retention	FALSE	canonical	2	3	junction_5	109.113540433268	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2585	False	NA	-21	True	AATACA	-14	NA	99337148	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320150_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.54	chr14	-	4290	4	NIC	ENSMUSG00000033166.12	novel	2971	20	NA	NA	-4441	-10	intron_retention	FALSE	canonical	3	472	junction_3	14.9666295470958	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	NA	False	NA	-21	True	AATACA	-14	NA	99320560	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661
ES.11292.56	chr14	-	5545	18	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-19	-10	intron_retention	FALSE	canonical	3	393	junction_10	29.3440396734986	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2508	False	NA	-21	True	AATACA	-14	NA	99337225	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.59	chr14	-	3303	6	NIC	ENSMUSG00000033166.12	novel	2971	20	NA	NA	-5461	-10	intron_retention	FALSE	canonical	3	428	junction_4	28.1112077293026	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	NA	False	NA	-21	True	AATACA	-14	NA	99321580	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99318819_99320085_99320173_99321462
ES.11292.6	chr14	-	5129	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	21	0	-9	0	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCTATGCTGAATGT	2548	False	NA	NA	False	NA	NA	NA	99337185	99312641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.60	chr14	-	2706	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	176	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	134.16780537819	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	3133	False	NA	-21	True	AATACA	-14	NA	99336600	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332686_99334192_99334267_99335020_99335215_99336118_99336277_99336554
ES.11292.61	chr14	-	3218	21	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-3	-10	intron_retention	FALSE	canonical	3	37	junction_19	123.94808388999	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2554	False	NA	-21	True	AATACA	-14	NA	99337179	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.65	chr14	-	3814	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	28	-10	intron_retention	FALSE	canonical	3	393	junction_12	28.6464744534988	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2585	False	NA	-21	True	AATACA	-14	NA	99337148	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.66	chr14	-	4713	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-10	intron_retention	FALSE	canonical	3	393	junction_11	29.1079832925269	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2544	False	NA	-21	True	AATACA	-14	NA	99337189	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.67	chr14	-	1680	13	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	-6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	131.192183032713	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2551	False	NA	-21	True	AATACA	-14	NA	99337182	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99337095
ES.11292.68	chr14	-	3778	15	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	3589	-10	intron_retention	FALSE	canonical	3	427	junction_9	22.6666166466035	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	6956	False	NA	-21	True	AATACA	-14	NA	99332777	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99327192_99327400_99327515_99328763_99328929_99332608
ES.11292.69	chr14	-	4661	19	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	5	-10	intron_retention	FALSE	canonical	3	415	junction_18	26.0131139767124	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2562	False	NA	-21	True	AATACA	-14	NA	99337171	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.7	chr14	-	5047	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.37317197883	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCTATGCTGAATGT	2579	False	NA	NA	False	NA	NA	NA	99337154	99312641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99313271_99313323_99314902_99315697_99315823_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.70	chr14	-	2934	21	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	101.69477616869	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2534	False	NA	-21	True	AATACA	-14	NA	99337199	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316698_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.72	chr14	-	3057	22	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	28	-10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	150.460969694338	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTGCATTTTTATT	2585	False	NA	-21	True	AATACA	-14	NA	99337148	99314715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327082_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.73	chr14	-	2911	20	NNC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	26	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.248367381946	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAAATTTGCATTTTTAT	2583	False	NA	-22	True	AATACA	-13	NA	99337150	99314716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327198_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.74	chr14	-	6283	18	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	11	-13	intron_retention	FALSE	canonical	3	37	junction_16	133.378613995199	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACAAATTTGCATTTTT	2544	False	NA	-24	True	AATACA	-11	NA	99337189	99314718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
ES.11292.75	chr14	-	1606	8	ISM	ENSMUSG00000033166.12	ENSMUST00000228643.2	2971	20	-47	12095	-17	-4689	5prime_fragment	FALSE	canonical	3	415	junction_7	16.9597362320652	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAAAGTATATGTTGC	2510	False	NA	NA	False	AATAAA	-21	NA	99337223	99326800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ES.11292.76	chr14	-	171	1	Intergenic	novelGene_9406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGGCAGGTGT	5189	False	NA	NA	False	NA	NA	NA	99334544	99334373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99334400_99334500
ES.11292.77	chr14	-	172	2	Antisense	novelGene_ENSMUSG00000115071.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGGCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	99456643	99334373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_99334394_99456491
ES.11292.78	chr14	-	175	1	Intergenic	novelGene_9410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAAAAGAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	99456643	99456468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99456500_99456600
ES.11293.1	chr14	+	2305	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-6588	-1523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1546.46483956151	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTGGTCATTTTGA	NA	False	NA	NA	False	AATACA	-14	NA	99529538	99550949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99529675_99535786_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.10	chr14	+	3232	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1546.46483956151	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGTGGTGCCTTCTT	NA	False	NA	17	True	AATAAA	-13	NA	99536106	99552467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539309_99539443_99539691_99540853_99540914_99550586
ES.11293.12	chr14	+	1318	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-18	-1629	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	1700.4160928693	2359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	99536108	99550843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99539239_99539691_99540853_99540914_99550586
ES.11293.13	chr14	+	1460	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-4	-1629	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	1541.71160970527	2359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	99536122	99550843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539174_99539440_99539691_99540853_99540914_99550586
ES.11293.14	chr14	+	3921	3	NIC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-4	-1593	intron_retention	FALSE	canonical	3	3503	junction_2	111	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAGGAACTGGAA	NA	False	NA	NA	False	NA	NA	NA	99536122	99550879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99539691_99540853_99540914_99550586
ES.11293.15	chr14	+	3149	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGGTGCCTTCTTG	NA	False	NA	18	True	AATAAA	-14	NA	99536122	99552468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536192_99536394_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.16	chr14	+	3102	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGATGTATGTGGTGC	NA	False	NA	11	True	AATAAA	-7	NA	99536123	99552461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536165_99536406_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.17	chr14	+	3230	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGCCTTCTTGACC	NA	False	NA	21	True	AATAAA	-17	NA	99536123	99552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536209_99536332_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.18	chr14	+	3197	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-3	-26	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAAAAGTGCCTAAA	NA	False	NA	-4	True	NA	NA	NA	99536123	99552446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536489_99536620_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.19	chr14	+	1682	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-3	-1588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99536123	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536209_99536293_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.2	chr14	+	2949	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-6581	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1705.59419427822	2426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99529545	99552472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99529675_99538816_99539691_99540853_99540914_99550586
ES.11293.21	chr14	+	1766	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1629	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1697.33994499891	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	99536125	99550843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539691_99540853_99540956_99550586
ES.11293.22	chr14	+	4515	3	NIC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	3464	junction_1	19.5	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGCCTTCTTGACC	NA	False	NA	21	True	AATAAA	-17	NA	99536125	99552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99536659_99538816_99540914_99550586
ES.11293.23	chr14	+	3257	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536173_99536259_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.24	chr14	+	2720	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	1681.11629579872	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99539440_99539691_99540853_99540914_99550586
ES.11293.25	chr14	+	3386	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1697.33994499891	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539691_99540853_99540956_99550586
ES.11293.26	chr14	+	2977	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536202_99536568_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.27	chr14	+	3075	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	1541.71160970527	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGATGTATGTGGTGC	NA	False	NA	11	True	AATAAA	-7	NA	99536125	99552461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539174_99539440_99539691_99540853_99540914_99550586
ES.11293.28	chr14	+	2810	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-1	543	-1	-543	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGACTCGTCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	99536125	99551929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.29	chr14	+	2925	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	1700.4160928693	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGTGGTGCCTTCTT	NA	False	NA	17	True	AATAAA	-13	NA	99536125	99552467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99539239_99539691_99540853_99540914_99550586
ES.11293.3	chr14	+	2191	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-427	1588	-427	-1588	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99535699	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.31	chr14	+	11053	4	NNC	ENSMUSG00000005148.9	novel	2852	3	NA	NA	-1	-1589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1697.8104199887	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGGAACTGGAAATGT	NA	False	NA	NA	False	NA	NA	NA	99536125	99550883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539691_99540853_99549495_99549878
ES.11293.32	chr14	+	3151	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536385_99536577_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.33	chr14	+	1641	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	99536125	99550843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536205_99536287_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.34	chr14	+	1533	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-19	NA	99536125	99550843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536165_99536355_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.35	chr14	+	12704	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1696.86947052506	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99538816_99539691_99540853_99549611_99549923
ES.11293.36	chr14	+	2152	2	NNC	ENSMUSG00000005148.9	novel	2852	3	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536125	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536598_99550783
ES.11293.37	chr14	+	1141	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1588	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	1681.11629579872	2364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99536125	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536659_99539440_99539691_99540853_99540914_99550586
ES.11293.39	chr14	+	1590	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-1	-1588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99536125	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536373_99536547_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.4	chr14	+	3686	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-333	-1	-333	1	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCTTCTTGACCCT	NA	False	NA	23	True	AATAAA	-19	NA	99535793	99552473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.41	chr14	+	3341	3	FSM	ENSMUSG00000005148.9	ENSMUST00000226784.2	2852	3	-464	-25	-1	25	multi-exon	FALSE	canonical	3	3464	junction_1	130.5	2318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACGATGAAGGATCCAG	NA	False	NA	NA	False	NA	NA	NA	99536125	99542787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853
ES.11293.42	chr14	+	3137	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99536128	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536372_99536575_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.43	chr14	+	3246	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGGTGCCTTCTTG	NA	False	NA	18	True	AATAAA	-14	NA	99536143	99552468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536213_99536297_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.45	chr14	+	3232	3	NIC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	56	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1732	2423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGGTGCCTTCTTG	NA	False	NA	18	True	AATAAA	-14	NA	99536182	99552468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99536659_99538816_99539691_99550586
ES.11293.46	chr14	+	2370	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	70	912	70	-912	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAATGAGATTTTATTT	NA	False	NA	NA	False	AGTAAA	-20	NA	99536196	99551560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.47	chr14	+	2821	3	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	2688	1	2225	-1	3prime_fragment	FALSE	canonical	3	3503	junction_2	111	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGCCTTCTTGACC	NA	False	NA	21	True	AATAAA	-17	NA	99538814	99552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99539691_99540853_99540914_99550586
ES.11293.48	chr14	+	4250	2	Genic_Genomic	ENSMUSG00000005148.9	novel	3352	4	NA	NA	9732	-1588	multi-exon	FALSE	canonical	1	2	junction_1	0	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99546321	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_99549611_99549923
ES.11293.49	chr14	+	7021	2	Genic_Genomic	ENSMUSG00000005148.9	novel	3352	4	NA	NA	9750	1201	multi-exon	FALSE	canonical	1	2	junction_1	0	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGCTTGTAACCCCAAG	NA	False	NA	NA	False	NA	NA	NA	99546339	99553673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_99549611_99549923
ES.11293.5	chr14	+	2874	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	1681.58701496202	2423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGCCTTCTTGACC	NA	False	NA	21	True	AATAAA	-17	NA	99536081	99552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536137_99538816_99539691_99540853_99540914_99550586
ES.11293.50	chr14	+	3500	1	NIC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	10795	-1588	mono-exon	FALSE	NA	NA	NA	NA	NA	2357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99547384	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99547400_99550900
ES.11293.51	chr14	+	2570	2	Genic_Genomic	ENSMUSG00000005148.9	novel	3352	4	NA	NA	11378	-1588	multi-exon	FALSE	canonical	0	0	junction_1	0	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99547967	99550884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_99549577_99549923
ES.11293.52	chr14	+	3981	1	NIC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	11893	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	99548482	99552463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_99548500_99552500
ES.11293.53	chr14	+	4938	1	Genic_Genomic	ENSMUSG00000005148.9	novel	NA	NA	NA	NA	12115	1170	mono-exon	FALSE	NA	NA	NA	NA	NA	2418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99548704	99553642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_99548700_99553600
ES.11293.54	chr14	+	1011	1	ISM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	15071	264	14608	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	1653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTTCTCAACGTG	NA	False	NA	NA	False	GATAAA	-20	NA	99551197	99552208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_99551200_99552200
ES.11293.6	chr14	+	1277	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-41	-1594	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	1681.58701496202	2364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAGGAACTGGA	NA	False	NA	NA	False	NA	NA	NA	99536085	99550878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536137_99538816_99539691_99540853_99540914_99550586
ES.11293.7	chr14	+	2961	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	-40	431	-40	-431	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGCCAAAAGCGATCT	NA	False	NA	NA	False	NA	NA	NA	99536086	99552041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ES.11293.8	chr14	+	1608	5	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	-40	-1591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.46483956151	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAAGGAACTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	99536086	99550881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_99536385_99536577_99536659_99538816_99539691_99540853_99540914_99550586
ES.11294.1	chr14	-	1176	2	Antisense	novelGene_ENSMUSG00000005148.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACTTGACGCCCGCCTC	NA	False	NA	NA	False	NA	NA	NA	99539455	99536121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_99536657_99538814
ES.11295.1	chr14	+	311	2	Intergenic	novelGene_9415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGAGTCTTGATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	99576614	99588762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99576681_99588517
ES.11295.2	chr14	+	232	2	Intergenic	novelGene_9416	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTCCCCTTTATGTG	2893	False	NA	NA	False	AATAAA	-14	NA	99587376	99588702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99587424_99588517
ES.11296.1	chr14	+	2338	1	Intergenic	novelGene_9417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	7031	False	NA	NA	False	NA	NA	NA	99591514	99593852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99591500_99593900
ES.11297.1	chr14	-	160	1	Intergenic	novelGene_9418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATCCTTGAA	NA	False	NA	NA	False	NA	NA	NA	99591963	99591803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99591800_99592000
ES.11298.1	chr14	-	178	1	Intergenic	novelGene_9419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	99599003	99598825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99598800_99599000
ES.11299.1	chr14	-	177	1	Intergenic	novelGene_9420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTATTTGAGTGCC	NA	False	NA	NA	False	NA	NA	NA	99607698	99607521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99607500_99607700
ES.113.1	chr1	+	3079	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAACAAAAAGTACGAA	NA	False	NA	NA	False	NA	NA	NA	13141612	13144691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13141600_13144700
ES.113.2	chr1	+	2271	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATAAGTTATGAATGA	NA	False	NA	NA	False	NA	NA	NA	13141642	13143913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13141600_13143900
ES.1130.1	chr1	+	6302	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	-76	0	-76	0	multi-exon	TRUE	canonical	3	23	junction_9	5.5589876551401	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTGCTTTTGTCTCAG	NA	False	NA	23	True	AATAAA	-23	NA	106099405	106321980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
ES.1130.10	chr1	+	1409	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	2996	False	NA	NA	False	NA	NA	NA	106247980	106249389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_106248000_106249400
ES.1130.11	chr1	+	8258	1	NIC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	28230	34710	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTATCCACAGAAATTGA	NA	False	NA	NA	False	NA	NA	NA	106273197	106281455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_106273200_106281500
ES.1130.12	chr1	+	6432	1	NIC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	29034	33688	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	106274001	106280433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_106274000_106280400
ES.1130.13	chr1	+	173	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCGTTAC	NA	False	NA	NA	False	NA	NA	NA	106291439	106291612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_106291400_106291600
ES.1130.2	chr1	+	8352	9	NIC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	-70	34710	intron_retention	FALSE	canonical	3	23	junction_8	5.45292352779681	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTATCCACAGAAATTGA	NA	False	NA	NA	False	NA	NA	NA	106099411	106281455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106274911_106278261
ES.1130.3	chr1	+	6178	10	ISM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	-60	40525	-60	34710	5prime_fragment	FALSE	canonical	3	23	junction_9	5.41146473861596	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTATCCACAGAAATTGA	NA	False	NA	NA	False	NA	NA	NA	106099421	106281455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261
ES.1130.4	chr1	+	6135	16	NIC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	-21	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	10.1709826904232	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATCTATCTGCTTTT	NA	False	NA	16	True	AATAAA	-16	NA	106099460	106321973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106314056_106314252_106317403_106317633_106319858
ES.1130.5	chr1	+	3502	1	NIC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	53	-112116	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTATTCTTGAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	106099534	106103036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_106099500_106103000
ES.1130.6	chr1	+	4814	10	ISM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	53	41776	53	33459	5prime_fragment	FALSE	canonical	3	23	junction_9	5.41146473861596	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTAGATGGATGTGA	NA	False	NA	NA	False	AATAAA	-35	NA	106099534	106280204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261
ES.1130.8	chr1	+	4271	15	NNC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	5614	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	10.3107334603216	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAATCTATCTGCTTT	337	False	NA	15	True	AATAAA	-15	NA	106214768	106321972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314246_106317403_106317633_106319858
ES.1130.9	chr1	+	4348	16	NNC	ENSMUSG00000044340.8	novel	6226	17	NA	NA	5617	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.9769025580067	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCTATCTGCTTTTGT	340	False	NA	18	True	AATAAA	-18	NA	106214771	106321975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106272910_106272982_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
ES.11300.1	chr14	+	177	1	Intergenic	novelGene_9421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	99624189	99624366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99624200_99624400
ES.11301.1	chr14	-	171	1	Intergenic	novelGene_9422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAGTAAATCT	NA	False	NA	NA	False	NA	NA	NA	99688014	99687843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99687800_99688000
ES.11302.1	chr14	-	176	1	Intergenic	novelGene_9423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCACTGAATGA	NA	False	NA	NA	False	NA	NA	NA	99782622	99782446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_99782400_99782600
ES.11303.1	chr14	+	175	1	Intergenic	novelGene_9424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGATATG	NA	False	NA	NA	False	NA	NA	NA	99792524	99792699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_99792500_99792700
ES.11304.1	chr14	-	2798	1	Intergenic	novelGene_9425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAACAAGACTCCCTAAT	3386	False	NA	NA	False	AATAAA	-10	NA	100106420	100103622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_100103600_100106400
ES.11305.1	chr14	+	3272	10	Intergenic	novelGene_9426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGCAACCCAGGGAACT	NA	False	NA	NA	False	AATGAA	-2	NA	100111105	100521924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_100112750_100137516_100137676_100179469_100179528_100224858_100225003_100260057_100260605_100300347_100300504_100347207_100347297_100387167_100387231_100393509_100393688_100521690
ES.11305.2	chr14	+	1052	1	Intergenic	novelGene_9428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	100161848	100162900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_100161800_100162900
ES.11305.3	chr14	+	5219	2	Antisense	novelGene_ENSMUSG00000072294.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAACCAACCTTT	NA	False	NA	NA	False	NA	NA	NA	100512769	100518036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_100517601_100517648
ES.11306.1	chr14	-	1240	1	Genic_Genomic	ENSMUSG00000072294.6	novel	NA	NA	NA	NA	28685	165	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCATGTCTTTTTC	664	False	NA	NA	False	AATGAA	-12	NA	100109142	100107902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_100107900_100109100
ES.11306.10	chr14	-	8024	2	Intergenic	novelGene_9429	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACAGCCTTCTCGACT	NA	False	NA	NA	False	NA	NA	NA	100365644	100357307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_100360431_100360743
ES.11306.11	chr14	-	3808	1	Intergenic	novelGene_9430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCGTACCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	100386335	100382527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_100382500_100386300
ES.11306.2	chr14	-	6048	8	FSM	ENSMUSG00000072294.6	ENSMUST00000228216.2	5890	8	-145	-13	-145	13	multi-exon	FALSE	canonical	2	17	junction_2	8.24126005820341	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTGTGTATGGATGA	NA	False	NA	NA	False	AATAAA	-24	NA	100522260	100108054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_100112751_100137517_100137676_100179469_100179533_100224866_100225003_100260057_100260605_100347206_100347297_100387167_100387232_100521966
ES.11306.3	chr14	-	5982	8	NIC	ENSMUSG00000072294.6	novel	5890	8	NA	NA	-4	9	combination_of_known_junctions	FALSE	canonical	2	16	junction_7	8.72481799120141	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATATGCCTTGTGTATGG	NA	False	NA	NA	False	AATAAA	-20	NA	100521924	100108058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_100112751_100137517_100137676_100179469_100179533_100224866_100225003_100260057_100260605_100347206_100347297_100387167_100387232_100521692
ES.11306.4	chr14	-	7657	1	Intergenic	novelGene_9427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTGTTGTGCAAGACA	NA	False	NA	NA	False	NA	NA	NA	100136848	100129191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_100129200_100136800
ES.11306.5	chr14	-	1668	7	NNC	ENSMUSG00000072294.6	novel	719	4	NA	NA	-4	-40874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.4067885233162	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATAGCCTGGTTCTCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	100521924	100178510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_100179050_100179469_100179533_100224866_100225003_100260057_100260605_100347206_100347297_100347601_100347663_100521692
ES.11306.6	chr14	-	1581	7	NNC	ENSMUSG00000072294.6	novel	719	4	NA	NA	38	-40922	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	9.3571125650788	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGATCAGTTTGCCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	100521882	100178558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_100179050_100179469_100179533_100224866_100225003_100260057_100260605_100347206_100347297_100387167_100387232_100521692
ES.11306.7	chr14	-	9084	5	ISM	ENSMUSG00000072294.6	ENSMUST00000228216.2	5890	8	-327	109028	-327	43172	5prime_fragment	FALSE	canonical	3	19	junction_4	7.96868872525461	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCAGTGGTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	100522442	100217095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_100225003_100260057_100260605_100347206_100347297_100387167_100387232_100521966
ES.11306.8	chr14	-	8695	4	NIC	ENSMUSG00000072294.6	novel	5890	8	NA	NA	-19	43155	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.5848929700813	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGAAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	100522134	100217112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_100225003_100260057_100260605_100347206_100347297_100521966
ES.11306.9	chr14	-	4043	7	NNC	ENSMUSG00000072294.6	novel	5890	8	NA	NA	-20	38135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.8710078094899	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTTTGGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	100522135	100222132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_100225003_100260057_100260605_100300347_100300502_100302848_100302998_100347206_100347297_100387167_100387232_100521966
ES.11307.1	chr14	+	2842	3	NNC	ENSMUSG00000110273.2	novel	449	3	NA	NA	-744	2325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTAGTCAATTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	100522856	100532336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_100522950_100529498_100529661_100529749
ES.11307.2	chr14	+	2812	3	NNC	ENSMUSG00000110273.2	novel	449	3	NA	NA	-57	2327	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTAGTCAATTTTGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	100523543	100532338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_100523605_100529498_100529661_100529749
ES.11307.3	chr14	+	2878	3	NNC	ENSMUSG00000110273.2	novel	449	3	NA	NA	4410	2319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCATGATGTAGTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	100528010	100532330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_100528125_100529498_100529661_100529728
ES.11308.1	chr14	-	3595	2	Intergenic	novelGene_9431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGACTATCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	101319971	101313874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_101317351_101319852
ES.11309.1	chr14	-	5840	19	NNC	ENSMUSG00000033083.17	novel	6483	19	NA	NA	144	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.26589360481856	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	101845778	101679794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714690_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ES.11309.2	chr14	-	6727	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	-243	-1	-85	1	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	101846712	101679794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ES.11309.3	chr14	-	3796	11	NNC	ENSMUSG00000033083.17	novel	674	2	NA	NA	-40	-6767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.02807573457052	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTTGAAGTTTATG	NA	False	NA	NA	False	AATAAA	-27	NA	101846308	101707176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101708507_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ES.1131.1	chr1	-	2927	1	ISM	ENSMUSG00000057329.8	ENSMUST00000112751.2	7191	2	173170	0	172075	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGTCCTCTGGAACTG	NA	False	NA	NA	False	AATAAA	-21	NA	106468834	106465907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106465900_106468800
ES.11310.1	chr14	+	151	1	Intergenic	novelGene_9432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	101855272	101855423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_101855300_101855400
ES.11311.1	chr14	+	204	1	Intergenic	novelGene_9433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGACACCCTGAGA	NA	False	NA	NA	False	NA	NA	NA	101857547	101857751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_101857500_101857800
ES.11312.1	chr14	+	1563	1	Intergenic	novelGene_9434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAGCTATTGAGTTAC	2978	False	NA	NA	False	NA	NA	NA	101872403	101873966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_101872400_101874000
ES.11313.1	chr14	-	3537	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	7	1913	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAACTAGTACCTCATA	NA	False	NA	NA	False	NA	NA	NA	101877877	101868503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874545_101877820
ES.11313.10	chr14	-	774	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	14	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTTAAAAACAATTTTT	NA	False	NA	11	True	AATAAA	-27	NA	101878108	101871497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874545_101877820
ES.11313.12	chr14	-	1239	2	FSM	ENSMUSG00000075486.11	ENSMUST00000131022.2	542	2	232	-929	3	929	multi-exon	FALSE	canonical	3	419	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTACTGGGCTGTACGT	NA	False	NA	NA	False	ATTAAA	-16	NA	101877890	101876562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_101877736_101877824
ES.11313.3	chr14	-	2015	4	NNC	ENSMUSG00000075486.11	novel	1090	4	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.894912158666	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGTGGTGAGCTGAC	NA	False	NA	-1	True	NA	NA	NA	101878087	101870417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874543_101877547_101877736_101877824
ES.11313.4	chr14	-	4804	3	NIC	ENSMUSG00000075486.11	novel	1090	4	NA	NA	7	-7	intron_retention	FALSE	canonical	3	419	junction_2	9	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCACTCCTGTGGTGA	NA	False	NA	-7	True	NA	NA	NA	101877877	101870423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_101871829_101874389_101877736_101877824
ES.11313.5	chr14	-	1621	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACCACTCCTGTGGTGA	NA	False	NA	-7	True	NA	NA	NA	101877881	101870423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874545_101877820
ES.11313.6	chr14	-	4037	3	NIC	ENSMUSG00000075486.11	novel	1090	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	419	junction_2	9	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	101877888	101871201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_101871829_101874389_101877736_101877824
ES.11313.7	chr14	-	849	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATGACGTGTCTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	101877888	101871202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874545_101877820
ES.11313.8	chr14	-	1085	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAGTTTTATGACGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	101878121	101871208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_101871829_101874389_101874543_101877809
ES.11313.9	chr14	-	908	3	ISM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	218	53	-11	-53	intron_retention	FALSE	canonical	3	437	junction_1	2.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAGTTAAGAAGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	101877904	101871254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_101871829_101874389_101874543_101877723
ES.11314.1	chr14	+	181	1	Intergenic	novelGene_9435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTATTCTATTATC	583	False	NA	NA	False	NA	NA	NA	101884903	101885084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_101884900_101885100
ES.11315.1	chr14	+	938	8	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1532.99751720448	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	83	False	NA	21	True	AATAAA	-17	NA	101891395	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.12	chr14	+	1075	9	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-6	-13	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	2072.07229829825	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTACCTGTATTTTGT	111	False	NA	8	True	AATAAA	-4	NA	101891423	101933547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
ES.11315.13	chr14	+	998	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-5	-11	intron_retention	FALSE	canonical	3	3225	junction_4	499.407567390951	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTACCTGTATTTTGTGT	112	False	NA	10	True	AATAAA	-6	NA	101891424	101933549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.14	chr14	+	712	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	25	533	-2	-533	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTTTAAACATTCATG	115	False	NA	NA	False	ATTAAA	-29	NA	101891427	101904725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ES.11315.15	chr14	+	5417	7	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	1615.8078131043	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	115	False	NA	21	True	AATAAA	-17	NA	101891427	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101932654_101933337
ES.11315.16	chr14	+	894	8	NNC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1970.84140324246	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	116	False	NA	21	True	AATAAA	-17	NA	101891428	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906002_101928007_101928084_101932594_101932654_101933337
ES.11315.17	chr14	+	1092	9	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2079.10599402123	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	121	False	NA	21	True	AATAAA	-17	NA	101891433	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
ES.11315.18	chr14	+	4505	5	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	5	4718	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1871.68059508026	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAACTAACCAGGACACTA	122	False	NA	NA	False	NA	NA	NA	101891434	101909976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964
ES.11315.19	chr14	+	1652	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	34	-416	7	416	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATTAAGGAAGCTAAAT	124	False	NA	NA	False	AATAAA	-18	NA	101891436	101905674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ES.11315.2	chr14	+	5961	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	2	-4693	2	4693	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	92	False	NA	NA	False	NA	NA	NA	101891404	101909951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ES.11315.20	chr14	+	6895	2	ISM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	38	-4718	11	4718	intron_retention	FALSE	canonical	0	0	junction_1	0	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAACTAACCAGGACACTA	128	False	NA	NA	False	NA	NA	NA	101891440	101909976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_101891556_101903196
ES.11315.21	chr14	+	3130	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	43	-1903	-6	1903	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTGCCTTCTTCTTGT	133	False	NA	NA	False	AATAAA	-31	NA	101891445	101907161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ES.11315.22	chr14	+	835	7	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-5	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1952.70333981722	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGACTCTACCTGTA	134	False	NA	2	True	ATTAAA	-13	NA	101891446	101933541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928110_101933337
ES.11315.23	chr14	+	730	7	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1906.64499550621	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	134	False	NA	21	True	AATAAA	-17	NA	101891446	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.25	chr14	+	3632	5	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	-4	-11	intron_retention	FALSE	canonical	0	0	junction_1	1832.76517522022	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTACCTGTATTTTGTGT	135	False	NA	10	True	AATAAA	-6	NA	101891447	101933549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101904105_101904427_101906013_101928007_101928084_101932594
ES.11315.26	chr14	+	901	8	NNC	ENSMUSG00000022111.10	novel	935	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1982.22874974775	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	138	False	NA	21	True	AATAAA	-17	NA	101891450	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905946_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.28	chr14	+	2312	7	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	1	-22	intron_retention	FALSE	non_canonical	0	0	junction_1	2052.12312820974	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTTGACTCTACCT	140	False	NA	-1	True	ATTAAA	-10	NA	101891452	101933538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101906013_101928007_101928084_101932594_101932654_101933335
ES.11315.29	chr14	+	766	7	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	4	-22	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	2020.75126293828	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTTGACTCTACCT	143	False	NA	-1	True	ATTAAA	-10	NA	101891455	101933538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101932594_101932654_101933337
ES.11315.3	chr14	+	1042	9	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2073.6511278419	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGTATTTTGTGTTGT	94	False	NA	13	True	AATAAA	-9	NA	101891406	101933552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101911571_101911695_101928007_101928084_101932594_101932654_101933337
ES.11315.30	chr14	+	963	9	NNC	ENSMUSG00000022111.10	novel	935	8	NA	NA	2370	-22	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2073.3283477298	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTTGACTCTACCT	2518	False	NA	-1	True	ATTAAA	-10	NA	101893830	101933538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101893915_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101911571_101911695_101928007_101928084_101932594_101932654_101933337
ES.11315.31	chr14	+	2030	8	NNC	ENSMUSG00000022111.10	novel	935	8	NA	NA	2456	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.99751720448	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	2604	False	NA	21	True	AATAAA	-17	NA	101893916	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101895169_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.32	chr14	+	873	8	NNC	ENSMUSG00000022111.10	novel	935	8	NA	NA	2464	-11	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	1531.00580518501	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTACCTGTATTTTGTGT	2612	False	NA	10	True	AATAAA	-6	NA	101893924	101933549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101894031_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.33	chr14	+	4857	3	ISM	ENSMUSG00000022111.10	ENSMUST00000226340.2	935	8	20267	10	20267	-10	3prime_fragment	FALSE	canonical	3	4383	junction_1	57.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCTGTATTTTGTGTT	4402	False	NA	11	True	AATAAA	-7	NA	101923498	101933550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_101928084_101932594_101932654_101933337
ES.11315.34	chr14	+	5903	2	NIC	ENSMUSG00000022111.10	novel	3270	5	NA	NA	23720	-22	intron_retention	FALSE	canonical	3	4498	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTTGACTCTACCT	7855	False	NA	-1	True	ATTAAA	-10	NA	101926951	101933538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101932654_101933337
ES.11315.35	chr14	+	2859	3	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	26611	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	2245.5	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	NA	False	NA	21	True	AATAAA	-17	NA	101929842	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101932420_101932594_101932654_101933337
ES.11315.4	chr14	+	6606	3	NIC	ENSMUSG00000022111.10	novel	1270	4	NA	NA	4	4718	intron_retention	FALSE	canonical	0	0	junction_1	2230	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAACTAACCAGGACACTA	94	False	NA	NA	False	NA	NA	NA	101891406	101909976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101904105_101904427
ES.11315.5	chr14	+	915	8	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.99751720448	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGTTGTTTTTGCT	97	False	NA	20	True	AATAAA	-16	NA	101891409	101933559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101891548_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.6	chr14	+	872	7	NIC	ENSMUSG00000022111.10	novel	935	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2089.29429872066	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	101	False	NA	21	True	AATAAA	-17	NA	101891413	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
ES.11315.7	chr14	+	906	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1518.39837745338	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	101	False	NA	21	True	AATAAA	-17	NA	101891413	101933560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ES.11315.8	chr14	+	1195	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	14	61	-13	-61	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTCTCGTTTTCACT	104	False	NA	NA	False	AGTAAA	-18	NA	101891416	101905197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ES.11316.1	chr14	-	160	1	Intergenic	novelGene_9436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	101898327	101898167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_101898200_101898300
ES.11317.1	chr14	-	289	1	Intergenic	novelGene_9437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGTGGGTAATTGTTA	NA	False	NA	NA	False	NA	NA	NA	101908375	101908086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_101908100_101908400
ES.11317.2	chr14	-	176	1	Intergenic	novelGene_9438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGACTGAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	101908375	101908199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_101908200_101908400
ES.11318.1	chr14	+	5051	28	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-75	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	5.95755448303927	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTATTGTTTCTAATTA	NA	False	NA	34	True	AATAAA	-34	NA	101967317	102172141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.10	chr14	+	4876	28	NNC	ENSMUSG00000033060.17	novel	5774	27	NA	NA	18112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.29864598375336	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGCTTTTTAAAACT	NA	False	NA	16	True	AATAAA	-16	NA	101985504	102172123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101985692_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.11	chr14	+	4993	29	NNC	ENSMUSG00000033060.17	novel	5774	27	NA	NA	47450	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.48310144959269	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTGTTTCTAATTAT	NA	False	NA	35	True	AATAAA	-35	NA	102014842	102172142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_102015019_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
ES.11318.14	chr14	+	4304	23	NNC	ENSMUSG00000033060.17	novel	5774	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.97666856425014	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGCTTTTTAAAACT	NA	False	NA	16	True	AATAAA	-16	NA	102118272	102172123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102153328_102153371_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.15	chr14	+	3909	21	NNC	ENSMUSG00000033060.17	novel	3845	22	NA	NA	12403	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.651760417884	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAATGCTTTTTAAAAC	NA	False	NA	15	True	AATAAA	-15	NA	102133957	102172122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102153328_102153371_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
ES.11318.16	chr14	+	1555	1	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	14211	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCATTTGAGACTCTCC	NA	False	NA	NA	False	NA	NA	NA	102135765	102137320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_102135800_102137300
ES.11318.2	chr14	+	5019	30	NNC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.25428220936953	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTTTTTAAAACTCT	NA	False	NA	18	True	AATAAA	-18	NA	101967348	102172125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101967497_101967590_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
ES.11318.3	chr14	+	4902	27	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-36	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	7.36013570752171	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTTATTGTTTCT	NA	False	NA	29	True	AATAAA	-29	NA	101967356	102172136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.5	chr14	+	5103	29	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_26	7.55751754404655	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTTTTAAAACTCTT	NA	False	NA	19	True	AATAAA	-19	NA	101967359	102172126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
ES.11318.6	chr14	+	6220	27	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-33	4	intron_retention	FALSE	canonical	3	14	junction_7	6.06486144760935	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAAAACTCTTTAT	NA	False	NA	22	True	AATAAA	-22	NA	101967359	102172129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005
ES.11318.7	chr14	+	4866	29	NNC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.06772991295288	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAATGCTTTTTAAAAC	NA	False	NA	15	True	AATAAA	-15	NA	101967372	102172122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101967480_101967590_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.8	chr14	+	5057	28	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	7.22307687250889	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTTTTTAAAACTCT	NA	False	NA	18	True	AATAAA	-18	NA	101967376	102172125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150594_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11318.9	chr14	+	4949	28	NNC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	8.35593642420628	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAATGCTTTTTAAAAC	NA	False	NA	15	True	AATAAA	-15	NA	101967385	102172122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153328_102153371_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ES.11319.1	chr14	-	2258	1	Intergenic	novelGene_9439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGGTCCAGGTCTAC	6918	False	NA	NA	False	NA	NA	NA	102065418	102063160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_102063200_102065400
ES.1132.1	chr1	+	4718	1	Antisense	novelGene_ENSMUSG00000009905.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	106646211	106650929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_106646200_106650900
ES.11320.1	chr14	-	181	1	Intergenic	novelGene_9440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	102096442	102096261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_102096300_102096400
ES.11321.1	chr14	-	3951	1	FSM	ENSMUSG00000098557.2	ENSMUST00000184744.2	6057	1	2104	2	1018	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCCTGGTTCCTGGGT	1200	False	NA	NA	False	AATAAA	-19	NA	103217969	103214018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103214000_103218000
ES.11321.2	chr14	-	3287	2	NNC	ENSMUSG00000098557.2	novel	539	2	NA	NA	1617	-30	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAAAACATTCACTC	1799	False	NA	NA	False	ATTAAA	-5	NA	103217370	103214046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103217226_103217262
ES.11321.3	chr14	-	2734	1	FSM	ENSMUSG00000098557.2	ENSMUST00000184744.2	6057	1	2922	401	1836	-401	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTGTTTGTAAT	2018	False	NA	NA	False	ATTAAA	-16	NA	103217151	103214417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103214400_103217200
ES.11322.1	chr14	+	2446	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	-4	3	-4	-3	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	3	True	NA	NA	NA	103307647	103315061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.10	chr14	+	3044	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	88	-687	88	687	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103307739	103315751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.11	chr14	+	2619	5	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	93	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.258284332826	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAATAAAAAACATAAACAA	NA	False	NA	-45	True	NA	NA	NA	103307744	103315013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309069_103309236_103310211_103310530_103310622_103310849_103313263
ES.11322.12	chr14	+	2706	4	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	101	-49	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	119.973145143218	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACATAAACAAAA	NA	False	NA	-43	True	NA	NA	NA	103307752	103315015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309069_103309236_103310211_103310849_103313263
ES.11322.13	chr14	+	1504	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	111	830	111	-830	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGCTGTTGTGACAGA	NA	False	NA	NA	False	AATACA	-15	NA	103307762	103314234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.14	chr14	+	2394	5	NIC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	120	-49	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	128.250487328509	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACATAAACAAAA	NA	False	NA	-43	True	NA	NA	NA	103307771	103315015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_103307904_103309069_103309236_103309433_103309552_103310622_103310849_103313263
ES.11322.15	chr14	+	5894	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	120	-3569	120	3569	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATATACCATCAACTC	NA	False	NA	NA	False	AATAAA	-18	NA	103307771	103318633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.16	chr14	+	2747	5	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	133	-49	intron_retention	FALSE	canonical	0	0	junction_2	129.000968988609	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACATAAACAAAA	NA	False	NA	-43	True	NA	NA	NA	103307784	103315015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309069_103309552_103309803_103309972_103310622_103310849_103313263
ES.11322.17	chr14	+	4667	3	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	168	-3	intron_retention	FALSE	canonical	1	1	junction_1	123.5	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	3	True	NA	NA	NA	103307819	103315061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309091_103309236_103310622
ES.11322.2	chr14	+	2630	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	29	-214	29	214	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCAACAGTGTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	103307680	103315278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.3	chr14	+	2388	4	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	119.114324168935	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	3	True	NA	NA	NA	103307683	103315061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309091_103309236_103310622_103310849_103313263
ES.11322.4	chr14	+	2552	5	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.25048355809	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTTGCATCTTGTAT	NA	False	NA	3	True	NA	NA	NA	103307704	103315061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309069_103309236_103310366_103310530_103310622_103310849_103313263
ES.11322.5	chr14	+	5732	3	NIC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	58	3571	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	129	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATACCATCAACTCCA	NA	False	NA	NA	False	AATAAA	-20	NA	103307709	103318635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_103307904_103309069_103309236_103313263
ES.11322.6	chr14	+	3771	3	NIC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	62	1	intron_retention	FALSE	canonical	3	258	junction_1	0.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCATCTTGTATCTTT	NA	False	NA	7	True	NA	NA	NA	103307713	103315065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_103307904_103309069_103310849_103313263
ES.11322.7	chr14	+	5167	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	77	-2799	77	2799	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCTTCTGTTTTAATT	NA	False	NA	NA	False	AATAAA	-41	NA	103307728	103317863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ES.11322.8	chr14	+	397	2	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	80	5770	80	-1438	5prime_fragment	FALSE	canonical	3	258	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTAGTCAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	103307731	103309294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_103307904_103309069
ES.11322.9	chr14	+	3049	4	NNC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	83	-49	intron_retention	FALSE	canonical	1	1	junction_2	121.387350613187	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACATAAACAAAA	NA	False	NA	-43	True	NA	NA	NA	103307734	103315015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103307904_103309069_103309972_103310622_103310849_103313263
ES.11323.1	chr14	+	2004	1	Intergenic	novelGene_9442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAACAGCATGATAGCAC	NA	False	NA	NA	False	ATTAAA	-14	NA	103322001	103324005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_103322000_103324000
ES.11324.1	chr14	-	155	1	Intergenic	novelGene_9441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAAATACATACT	NA	False	NA	NA	False	NA	NA	NA	103312026	103311871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_103311900_103312000
ES.11325.1	chr14	-	4660	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	0	-1308	0	513	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTATTTTCACTCT	9922	False	NA	NA	False	ATTAAA	-19	NA	103336435	103317161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ES.11325.10	chr14	-	3458	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	-74	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATTTTTATAACTT	9727	False	NA	-2	True	AATAAA	-15	NA	103337076	103318467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
ES.11325.11	chr14	-	12146	2	FSM	ENSMUSG00000022124.16	ENSMUST00000127113.2	922	2	-9152	-2072	6	1	multi-exon	FALSE	canonical	3	200	junction_1	0	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGTATTTTTATAACT	9952	False	NA	-3	True	AATAAA	-14	NA	103336405	103318468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737
ES.11325.12	chr14	-	6290	4	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	6	0	intron_retention	FALSE	canonical	3	60	junction_3	58.1740682969846	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9867	False	NA	-4	True	AATAAA	-13	NA	103336936	103318469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103329863_103332628_103332978_103336597
ES.11325.13	chr14	-	3252	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-68	-650	-44	0	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9878	False	NA	-4	True	AATAAA	-13	NA	103336479	103318469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
ES.11325.14	chr14	-	6991	4	ISM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-580	-650	-1	0	intron_retention	FALSE	canonical	3	39	junction_3	69.9062864761739	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9812	False	NA	-4	True	AATAAA	-13	NA	103336991	103318469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772
ES.11325.15	chr14	-	3124	5	NNC	ENSMUSG00000022124.16	novel	3352	5	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	72.973882314154	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9909	False	NA	-6	True	AATAAA	-11	NA	103336448	103318471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332867_103332978_103336204
ES.11325.16	chr14	-	3165	5	NIC	ENSMUSG00000022124.16	novel	2534	5	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	78.4808893935332	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9822	False	NA	-6	True	AATAAA	-11	NA	103336981	103318471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336791
ES.11325.17	chr14	-	7104	4	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-527	2	-20	-2	intron_retention	FALSE	canonical	3	153	junction_3	19.4307888557196	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTGTATTTTTATA	9841	False	NA	-6	True	AATAAA	-11	NA	103336962	103318471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628
ES.11325.18	chr14	-	3068	5	NNC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	85.7642116503148	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTTGTATTTTTAT	9823	False	NA	-7	True	AATAAA	-10	NA	103336980	103318472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332867_103332978_103336791
ES.11325.19	chr14	-	6117	4	NIC	ENSMUSG00000022124.16	novel	3352	5	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	110	junction_3	37.4165738677394	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTTGTATTTTTAT	9920	False	NA	-7	True	AATAAA	-10	NA	103336437	103318472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103332978_103336204
ES.11325.2	chr14	-	4178	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-16	-810	-16	15	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTATATTTGATGCAA	9906	False	NA	NA	False	AATAAA	-27	NA	103336451	103317659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ES.11325.20	chr14	-	3207	4	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	86.6653846059018	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTTGTATTTTTAT	9768	False	NA	-7	True	AATAAA	-10	NA	103337035	103318472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103336597
ES.11325.21	chr14	-	2707	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-5	650	-5	0	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTTTTGGTTATATT	9917	False	NA	NA	False	AATAAA	-32	NA	103336440	103319119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ES.11325.22	chr14	-	5864	4	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	59	656	35	-6	intron_retention	FALSE	canonical	3	153	junction_3	19.4307888557196	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACTAAGTTTTGGT	9981	False	NA	NA	False	AATAAA	-26	NA	103336376	103319125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628
ES.11325.23	chr14	-	2680	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	-20	-12	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATATAAAAATACTAAGT	9841	False	NA	NA	False	AATAAA	-20	NA	103336962	103319131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
ES.11325.24	chr14	-	2381	5	NNC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	19	-225	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	78.1036970955921	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCATCTGTACAGTTT	9832	False	NA	NA	False	AATAAA	-17	NA	103336971	103319344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332867_103332978_103336597
ES.11325.25	chr14	-	2506	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-29	875	-29	-225	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCATCTGTACAGTTT	9893	False	NA	NA	False	AATAAA	-17	NA	103336464	103319344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ES.11325.26	chr14	-	2633	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-1	1677	-1	-232	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAAGAGCATCTGT	9812	False	NA	NA	False	AATAAA	-10	NA	103336991	103319351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
ES.11325.27	chr14	-	2316	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	13	-341	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATTGTTTATGAACAG	9826	False	NA	NA	False	ATTAAA	-44	NA	103336977	103319460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
ES.11325.28	chr14	-	2013	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	16	-641	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGAACGTTGATGAATG	9829	False	NA	-4	True	AATAAA	-18	NA	103336974	103319760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
ES.11325.29	chr14	-	1917	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-24	641	0	-641	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGAACGTTGATGAATG	9922	False	NA	-4	True	AATAAA	-18	NA	103336435	103319760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
ES.11325.3	chr14	-	4330	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-10	-11	2	11	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTATATTTGAT	9803	False	NA	NA	False	AATAAA	-23	NA	103337000	103317663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
ES.11325.30	chr14	-	4516	5	NNC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	-12	319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	81.1121908223419	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGATACAATGCTACT	9849	False	NA	NA	False	ACTAAA	-15	NA	103336954	103320221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103320947_103326737_103328933_103328964_103329855_103332628_103332978_103336597
ES.11325.4	chr14	-	3889	5	NNC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	72.973882314154	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTTGCAAAACTTGT	9941	False	NA	NA	False	AATAAA	-12	NA	103336416	103317674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332867_103332978_103336204
ES.11325.5	chr14	-	5259	2	NNC	ENSMUSG00000022124.16	novel	922	2	NA	NA	3689	268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103323564	103318201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103321825_103321928
ES.11325.6	chr14	-	3575	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-219	-4	-219	4	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTTATAACTTTA	9996	False	NA	0	True	AATAAA	-17	NA	103336654	103318465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ES.11325.7	chr14	-	3622	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-105	792	-93	3	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTATTTTTATAACTTT	9708	False	NA	-1	True	AATAAA	-16	NA	103337095	103318466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
ES.11325.8	chr14	-	9889	3	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	-542	-2	13	2	intron_retention	FALSE	canonical	3	170	junction_2	15	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATTTTTATAACTT	9826	False	NA	-2	True	AATAAA	-15	NA	103336977	103318467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103320947_103326737_103326910_103329739
ES.11325.9	chr14	-	3331	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	68.4945253286713	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATTTTTATAACTT	9804	False	NA	-2	True	AATAAA	-15	NA	103336999	103318467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336791
ES.11326.1	chr14	+	2919	1	Intergenic	novelGene_9443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACCAACCAACCACCTGG	NA	False	NA	NA	False	NA	NA	NA	103557661	103560580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_103557700_103560600
ES.11327.1	chr14	-	15044	83	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_50	7.71426053396959	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTAAAGTATTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	103584257	103350846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.10	chr14	-	11045	61	NNC	ENSMUSG00000033004.17	novel	15247	85	NA	NA	32726	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.78263768111648	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTGTGTAAAGTATT	NA	False	NA	NA	False	AATAAA	-33	NA	103480505	103350849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103358051_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103407292_103407473_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450048_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466871_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479
ES.11327.11	chr14	-	3799	16	NIC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	12870	-11	intron_retention	FALSE	canonical	3	10	junction_14	8.59353762363841	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAATATTTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	103376780	103350857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672
ES.11327.12	chr14	-	12345	70	NNC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	-6968	-18	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	8.13491570959309	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTGATAAAGTCTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	103520199	103350864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103393852_103394004_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033
ES.11327.14	chr14	-	7058	27	NNC	ENSMUSG00000033004.17	novel	5099	28	NA	NA	-1286	-19	intron_retention	FALSE	canonical	3	12	junction_14	7.9870457246897	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGTGATAAAGTCTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	103393985	103350865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559
ES.11327.15	chr14	-	7656	1	NIC	ENSMUSG00000033004.17	novel	5099	28	NA	NA	-8297	-1905	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAAAAAAAAAAGGCAAG	NA	False	NA	NA	False	GATAAA	-30	NA	103361129	103353473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103353500_103361100
ES.11327.16	chr14	-	6504	2	NNC	ENSMUSG00000033004.17	novel	2613	10	NA	NA	-6552	46	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAAATTCGGCCAAGGG	NA	False	NA	NA	False	AATAAA	-33	NA	103399251	103392702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103395538_103395582
ES.11327.17	chr14	-	9953	56	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-21	46	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	4.88803565473734	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAAATTCGGCCAAGGG	NA	False	NA	NA	False	AATAAA	-33	NA	103584271	103392702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.18	chr14	-	10057	57	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	5.16682781732443	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGAATAAAAAAACAA	NA	False	NA	NA	False	AAAAAG	-12	NA	103584264	103392747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103394204_103407292_103407449_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.19	chr14	-	6713	37	NNC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	15514	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.35686418151452	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGAATAAAAAAACAA	NA	False	NA	NA	False	AAAAAG	-12	NA	103497717	103392747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432200_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452749_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631
ES.11327.2	chr14	-	15195	84	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_29	7.93129885480108	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTAAAGTATTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	103584252	103350846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103407292_103407449_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.20	chr14	-	9862	56	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	5.34916383362935	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAGAATAAAAAAACA	NA	False	NA	NA	False	AAAAAG	-11	NA	103584220	103392748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452749_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.21	chr14	-	8786	56	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-2	-14341	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.46314473661674	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTAGATCTGACCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	103584252	103407089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103407449_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460615_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.22	chr14	-	7075	48	NNC	ENSMUSG00000033004.17	novel	14620	83	NA	NA	-21570	-19254	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	4.77231718532394	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTTGCATTGTTTATA	NA	False	NA	NA	False	CATAAA	-14	NA	103534801	103412002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615
ES.11327.23	chr14	-	5175	33	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	108	42946	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_30	4.13823633931171	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGGTTGGTGCCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	103584128	103457303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.24	chr14	-	4012	24	ISM	ENSMUSG00000033004.17	ENSMUST00000159855.8	15233	85	-3	129496	-3	19907	5prime_fragment	FALSE	canonical	2	6	junction_21	4.19018567066322	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAAGTTTGTCCTCTAT	NA	False	NA	NA	False	AATAAA	-10	NA	103584239	103480342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.25	chr14	-	3190	16	ISM	ENSMUSG00000033004.17	ENSMUST00000239305.2	15247	85	-7	162589	-7	-13186	5prime_fragment	FALSE	canonical	2	6	junction_13	4.9620784175809	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGTTTTCTGCTAGCT	NA	False	NA	NA	False	AATAAA	-12	NA	103584243	103513435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.3	chr14	-	15041	83	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_50	7.74247154054934	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGTGTAAAGTATTTT	NA	False	NA	NA	False	AATAAA	-35	NA	103584264	103350847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11327.4	chr14	-	7884	44	NNC	ENSMUSG00000033004.17	novel	15247	85	NA	NA	-8486	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	9.13080238480568	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTAAAGTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	103437537	103350848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376164_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103393435_103394004_103394204_103407292_103407449_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509
ES.11327.5	chr14	-	5203	30	NNC	ENSMUSG00000033004.17	novel	15247	85	NA	NA	17774	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	10.3110944255244	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTAAAGTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	103411277	103350848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103394124_103394204_103407292_103407449_103410002_103410126_103411222
ES.11327.6	chr14	-	2011	1	NIC	ENSMUSG00000033004.17	novel	5099	28	NA	NA	-28	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTGTGTAAAGTATT	NA	False	NA	NA	False	AATAAA	-33	NA	103352860	103350849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_103350800_103352900
ES.11327.7	chr14	-	15039	83	NNC	ENSMUSG00000033004.17	novel	15233	85	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	8.50971380425564	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTGTGTAAAGTATT	NA	False	NA	NA	False	AATAAA	-33	NA	103584269	103350849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392350_103392559_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457576_103460345_103460621_103461702_103461893_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ES.11328.1	chr14	+	3855	2	NNC	ENSMUSG00000115762.2	novel	486	3	NA	NA	39933	-3388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACTAGACCAGTGATGA	NA	False	NA	NA	False	ATTAAA	-22	NA	103741419	103746667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103741527_103742919
ES.11328.2	chr14	+	726	2	NNC	ENSMUSG00000115762.2	novel	486	3	NA	NA	39951	-6499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGGTTATAATTTAT	NA	False	NA	NA	False	NA	NA	NA	103741437	103743556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103741527_103742919
ES.11329.1	chr14	+	3073	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-474	-601	-56	4	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACGCATGAATGTGCA	NA	False	NA	31	True	AATAAA	-21	NA	103887607	103942347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ES.11329.2	chr14	+	2936	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-42	-31	-42	31	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGGCTCCCACGCCCG	NA	False	NA	58	True	NA	NA	NA	103887621	103942374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ES.11329.4	chr14	+	2771	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	-13	105	-13	0	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTTGCACTAATGAATG	NA	False	NA	-78	True	AATAAA	-27	NA	103887650	103942238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ES.11329.5	chr14	+	2918	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-428	-492	-10	0	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTTGCACTAATGAATG	NA	False	NA	-78	True	AATAAA	-27	NA	103887653	103942238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ES.11329.6	chr14	+	2269	5	NIC	ENSMUSG00000055717.14	novel	2863	7	NA	NA	-10	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	24.6208752890713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACCCATTTGCACTA	NA	False	NA	-85	True	AATAAA	-20	NA	103887653	103942231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_103888345_103894368_103894509_103932603_103932760_103939952_103940275_103941271
ES.11329.7	chr14	+	8351	8	NNC	ENSMUSG00000055717.14	novel	1998	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	22.6517557998564	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	27	True	AATAAA	-17	NA	103887665	103942343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103934220_103936072_103940275_103941271
ES.11329.8	chr14	+	2331	7	ISM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	6286	-595	1161	-2	3prime_fragment	FALSE	canonical	3	18	junction_1	16.9574631226359	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCAGCTCACGCATGAA	NA	False	NA	25	True	AATAAA	-15	NA	103894367	103942341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ES.1133.1	chr1	+	1643	5	Antisense	novelGene_ENSMUSG00000009905.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGGGACTGGGAGCCAG	NA	False	NA	NA	False	ATTAAA	-12	NA	106652104	106672124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_106652750_106655356_106655461_106662276_106662361_106667060_106667143_106671396
ES.1133.2	chr1	+	1534	1	Antisense	novelGene_ENSMUSG00000009905.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGGGACTGGGAGCCAG	NA	False	NA	NA	False	ATTAAA	-12	NA	106670590	106672124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_106670600_106672100
ES.11330.1	chr14	-	179	1	Intergenic	novelGene_9444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGGATATTTGGAG	NA	False	NA	NA	False	NA	NA	NA	103916549	103916370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_103916400_103916500
ES.11331.1	chr14	-	179	1	Intergenic	novelGene_9445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	103948026	103947847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_103947800_103948000
ES.11332.1	chr14	+	4678	1	Intergenic	novelGene_9446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCACGATCATGGAATTCA	NA	False	NA	NA	False	NA	NA	NA	103972523	103977201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_103972500_103977200
ES.11333.1	chr14	-	157	1	Intergenic	novelGene_9447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	104178346	104178189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_104178200_104178300
ES.11334.1	chr14	-	4058	2	NNC	ENSMUSG00000115424.2	novel	4192	2	NA	NA	8722	-1294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGGTTTAAGCTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	104688030	104683805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104686316_104686482
ES.11335.1	chr14	-	3079	1	NIC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATTGTATCGGTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	104702190	104699111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_104699100_104702200
ES.11335.2	chr14	-	3112	1	NIC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-33	-611	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTTTGCAGGGTTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	104702834	104699722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_104699700_104702800
ES.11335.3	chr14	-	695	3	NNC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-10	445	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGCAGTTTTATGA	NA	False	NA	-19	True	AATAAA	-10	NA	104705445	104700963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104701176_104701896_104701981_104705046
ES.11335.4	chr14	-	1842	1	NIC	ENSMUSG00000048349.10	novel	4445	3	NA	NA	-4	445	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGCAGTTTTATGA	NA	False	NA	-19	True	AATAAA	-10	NA	104702805	104700963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_104701000_104702800
ES.11336.1	chr14	+	3722	1	Intergenic	novelGene_9448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	104755550	104759272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_104755600_104759300
ES.11337.1	chr14	-	3515	6	FSM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	-93	-2	-80	2	multi-exon	FALSE	canonical	3	75	junction_2	11.8490505948789	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGATGTCATCATGG	NA	False	NA	1	True	AATAAA	-20	NA	104760161	104714969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ES.11337.2	chr14	-	3367	6	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.1902901179392	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTTTGATGTCATCA	NA	False	NA	-2	True	AATAAA	-17	NA	104760081	104714972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104717734_104738859_104738931_104740782_104740872_104743528_104743778_104745374_104745467_104759976
ES.11337.4	chr14	-	3452	6	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.7274435921651	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTTTGATGTCATCA	NA	False	NA	-2	True	AATAAA	-17	NA	104760114	104714972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104717721_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ES.11337.5	chr14	-	3303	5	NIC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	35.6405667743935	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTTTTGATGTCATCA	NA	False	NA	-2	True	AATAAA	-17	NA	104760088	104714972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104759976
ES.11337.6	chr14	-	3581	8	NNC	ENSMUSG00000022120.5	novel	3420	6	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.2940506072063	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTTTTGATGTCATC	NA	False	NA	-3	True	AATAAA	-16	NA	104760110	104714973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104717734_104734005_104734056_104738859_104738931_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ES.11337.7	chr14	-	1829	7	NNC	ENSMUSG00000022120.5	novel	1056	6	NA	NA	-15	556	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.7051357266957	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGGCTTGAATCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	104760096	104739265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104740323_104740364_104740451_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ES.11337.8	chr14	-	2001	2	NNC	ENSMUSG00000022120.5	novel	1632	5	NA	NA	18188	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTTGAGCTGATTA	NA	False	NA	NA	False	AATAAA	-15	NA	104741870	104739827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_104740323_104740364
ES.11338.1	chr14	+	200	1	Intergenic	novelGene_9449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCGAGAACGCCAGC	NA	False	NA	NA	False	NA	NA	NA	104953222	104953422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_104953200_104953400
ES.11339.1	chr14	+	4558	1	Antisense	novelGene_ENSMUSG00000022119.16_AS_novelGene_ENSMUSG00000091509.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAACAAAGAAAGAAA	8347	False	NA	NA	False	NA	NA	NA	105348228	105352786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_105348200_105352800
ES.1134.1	chr1	-	5552	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	13	-47	13	47	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGGCATATGATATCG	8274	False	NA	62	True	TTTAAA	-17	NA	106687444	106648141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.10	chr1	-	3329	11	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	19	-2848	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	74.0964911449928	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACCCCAACAAAC	8324	False	NA	NA	False	NA	NA	NA	106687394	106651036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106674268_106674991_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.11	chr1	-	4118	20	Fusion	ENSMUSG00000009905.6_ENSMUSG00000009907.18	novel	4633	11	NA	NA	-28	-2848	multi-exon	TRUE	canonical	0	0	junction_9	185.585350816472	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACCCCAACAAAC	57	False	NA	NA	False	NA	NA	NA	106724425	106651036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106700127_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.12	chr1	-	5156	2	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	29691	-2855	intron_retention	TRUE	non_canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAACAAAAAAAACCCC	6549	False	NA	NA	False	NA	NA	NA	106657722	106651043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106655831_106657353
ES.1134.14	chr1	-	2435	11	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	2	-2895	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.89639707398	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAACCCAAAA	8307	False	NA	NA	False	NA	NA	NA	106687411	106651083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106651119_106651260_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.16	chr1	-	2083	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	-4	3439	-4	-3439	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCTTACTCTCAGAGCA	8257	False	NA	NA	False	AATAAA	-16	NA	106687461	106651627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.17	chr1	-	2943	12	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	45	-3441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	89.1595283051862	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	8350	False	NA	NA	False	AATAAA	-14	NA	106687368	106651629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106674268_106674991_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106683384_106683618_106687273
ES.1134.18	chr1	-	3596	6	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	13009	-3441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.9373771323146	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	NA	False	NA	NA	False	AATAAA	-14	NA	106674404	106651629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106672392
ES.1134.19	chr1	-	3502	20	Fusion	ENSMUSG00000009905.6_ENSMUSG00000009907.18	novel	4633	11	NA	NA	-10	-3442	multi-exon	FALSE	canonical	1	1	junction_9	185.485303417639	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTTCTTACTCTCAGA	75	False	NA	NA	False	AATAAA	-13	NA	106724407	106651630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106700131_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.2	chr1	-	2976	1	ISM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	36239	54	36195	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAATGGTGAGTTTTATA	NA	False	NA	-39	True	TTTAAA	-18	NA	106651218	106648242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106648200_106651200
ES.1134.20	chr1	-	2715	11	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	19	-3462	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	74.0964911449928	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATGAAAAGC	8324	False	NA	NA	False	NA	NA	NA	106687394	106651650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106674268_106674991_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.21	chr1	-	1980	10	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	19	-3462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	57.7551237639368	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATGAAAAGC	8324	False	NA	NA	False	NA	NA	NA	106687394	106651650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662352_106667064_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.22	chr1	-	2116	11	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	7	-3462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	74.8895853907604	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATGAAAAGC	8312	False	NA	NA	False	NA	NA	NA	106687406	106651650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106674879_106674991_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.23	chr1	-	4194	21	Fusion	ENSMUSG00000009905.6_ENSMUSG00000009907.18	novel	4633	11	NA	NA	0	-3462	multi-exon	FALSE	canonical	1	1	junction_10	206.621392890475	522	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATGAAAAGC	85	False	NA	NA	False	NA	NA	NA	106724397	106651650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106674268_106674991_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106700131_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.24	chr1	-	1121	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	31	4366	3	-4366	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTGTATCTTGTTTT	8292	False	NA	NA	False	NA	NA	NA	106687426	106652554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.25	chr1	-	2563	2	ISM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	29713	4386	29669	-4386	3prime_fragment	FALSE	canonical	3	185	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAAGTTTTGGCCTCC	6527	False	NA	NA	False	NA	NA	NA	106657744	106652574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106652752_106655358
ES.1134.26	chr1	-	9987	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	29	-5383	29	24	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCACAGGTATCTGAGT	53	False	NA	NA	False	AATAAA	-39	NA	106724429	106691776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.27	chr1	-	5031	9	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	6724	-899	-55	899	3prime_fragment	FALSE	canonical	3	455	junction_4	35.6896343494858	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCAGTAGAGGGAGAAGC	6748	False	NA	NA	False	AATAAA	-27	NA	106717734	106696260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658
ES.1134.28	chr1	-	5299	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	104	-770	43	770	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAACATGTTAGAGTGTA	128	False	NA	NA	False	ATTAAA	-26	NA	106724354	106696389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.29	chr1	-	4679	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	33	-79	-28	79	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTCACAGTGCCTTTG	57	False	NA	NA	False	TATAAA	-16	NA	106724425	106697080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.3	chr1	-	4120	1	NIC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	34658	-447	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATAGATTTTCTGACCCT	NA	False	NA	NA	False	AATAAA	-28	NA	106652755	106648635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106648600_106652800
ES.1134.30	chr1	-	4089	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	51	493	-10	-493	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATAAGTCTCTGGTTAA	75	False	NA	NA	False	AATAAA	-17	NA	106724407	106697652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.31	chr1	-	3138	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	53	1442	-8	-1442	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAATTTGTGTAGCAT	77	False	NA	NA	False	NA	NA	NA	106724405	106698601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.32	chr1	-	2929	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	-11	1715	-11	-1715	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTTTTTTTTTTTTA	13	False	NA	11	True	AGTAAA	-26	NA	106724469	106698874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.33	chr1	-	4336	10	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	-11	-1726	intron_retention	FALSE	canonical	3	455	junction_3	36.9744656636321	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	74	False	NA	0	True	AGTAAA	-15	NA	106724408	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.34	chr1	-	3812	8	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	1662	-1726	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	180.628607583492	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	8465	False	NA	0	True	AGTAAA	-15	NA	106716017	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705185_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432
ES.1134.35	chr1	-	6033	10	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	-29	-1726	intron_retention	FALSE	canonical	3	455	junction_4	36.5026635253435	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	56	False	NA	0	True	AGTAAA	-15	NA	106724426	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106717816_106719407_106719520_106724150
ES.1134.36	chr1	-	6311	10	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	1227	1726	1076	-1726	3prime_fragment	FALSE	canonical	3	455	junction_4	33.9349413866236	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	1251	False	NA	0	True	AGTAAA	-15	NA	106723231	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407
ES.1134.37	chr1	-	2851	11	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	21	-1726	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	158.821944327602	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	45	False	NA	0	True	AGTAAA	-15	NA	106724437	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705185_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.38	chr1	-	4810	8	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	-3058	-1726	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	181.381208666011	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTTATATGTTTT	691	False	NA	0	True	AGTAAA	-15	NA	106713582	106698885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106712071_106712589
ES.1134.39	chr1	-	7692	5	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	2810	-1727	intron_retention	FALSE	canonical	3	455	junction_2	34.8640215695206	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	9613	False	NA	-1	True	AGTAAA	-14	NA	106714869	106698886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106706781_106707691_106708391_106710395_106710516_106714432
ES.1134.4	chr1	-	5079	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	-11	450	-11	-450	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAATAGATTTTCTGAC	8250	False	NA	NA	False	AATAAA	-25	NA	106687468	106648638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.40	chr1	-	3184	11	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	-27	-1728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.870755577265	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGCTTTTATATGTT	58	False	NA	-2	True	AGTAAA	-13	NA	106724424	106698887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705533_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.41	chr1	-	7423	10	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	17	-1728	intron_retention	FALSE	canonical	1	7	junction_3	164.171996529385	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGCTTTTATATGTT	102	False	NA	-2	True	AGTAAA	-13	NA	106724380	106698887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705185_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407
ES.1134.42	chr1	-	2800	11	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	24	-1728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	160.187889679588	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGCTTTTATATGTT	109	False	NA	-2	True	AGTAAA	-13	NA	106724373	106698887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714495_106717672_106717816_106719407_106719520_106724150
ES.1134.44	chr1	-	5233	9	NIC	ENSMUSG00000009907.18	novel	4539	12	NA	NA	0	-1729	intron_retention	FALSE	canonical	3	474	junction_3	29.687697367765	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	85	False	NA	-3	True	AGTAAA	-12	NA	106724397	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.45	chr1	-	7442	9	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	2	-1729	intron_retention	FALSE	canonical	3	455	junction_2	35.460365198345	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	87	False	NA	-3	True	AGTAAA	-12	NA	106724395	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.46	chr1	-	7490	9	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	-10	-1729	intron_retention	FALSE	canonical	3	455	junction_3	38.7161142161762	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	75	False	NA	-3	True	AGTAAA	-12	NA	106724407	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106717816_106719407_106719520_106724150
ES.1134.48	chr1	-	5087	12	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	548	-1729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	235.460863376099	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	723	False	NA	-3	True	AGTAAA	-12	NA	106723759	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707212_106707320_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106721375
ES.1134.49	chr1	-	7246	1	NIC	ENSMUSG00000009907.18	novel	4539	12	NA	NA	2220	-1729	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	8139	False	NA	-3	True	AGTAAA	-12	NA	106706134	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106698900_106706100
ES.1134.5	chr1	-	5526	11	NNC	ENSMUSG00000009905.6	novel	5518	10	NA	NA	15	-452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	74.7994652387301	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCAAATAGATTTTCTG	8320	False	NA	NA	False	AATAAA	-23	NA	106687398	106648640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106683384_106683618_106686987
ES.1134.50	chr1	-	6371	9	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	23	-1729	intron_retention	FALSE	canonical	3	455	junction_4	34.4083928715074	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	108	False	NA	-3	True	AGTAAA	-12	NA	106724374	106698888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106708391_106710395_106710516_106714432_106717816_106719407_106719520_106724150
ES.1134.51	chr1	-	2903	12	NNC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	14	-1740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	202.155328545908	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTATAACCTACTTTTGG	38	False	NA	-14	True	AGTAAA	-1	NA	106724444	106698899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106723764_106723789_106724150
ES.1134.52	chr1	-	2540	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	97	1996	36	-1996	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATACTTGTGTACCAAC	121	False	NA	NA	False	AATACA	-18	NA	106724361	106699155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.53	chr1	-	2434	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	23	2176	23	-2176	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGAGTCATGTCTTTCA	47	False	NA	NA	False	TTTAAA	-6	NA	106724435	106699335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.54	chr1	-	6109	2	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	17548	2184	1444	-2184	intron_retention	FALSE	canonical	3	534	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTAGCGAGAGTCAT	7363	False	NA	NA	False	NA	NA	NA	106706910	106699343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106700279_106701736
ES.1134.55	chr1	-	6169	9	NIC	ENSMUSG00000009907.18	novel	4633	11	NA	NA	29	-2443	intron_retention	FALSE	canonical	3	474	junction_4	29.6687440752048	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTTTTATAACTCCAT	114	False	NA	1	True	ATTAAA	-18	NA	106724368	106699602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106707841_106708233_106708391_106710395_106710516_106714432_106717816_106719407_106719520_106724150
ES.1134.56	chr1	-	2168	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	21	2444	21	-2444	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGCTTTTATAACTCCA	45	False	NA	0	True	ATTAAA	-17	NA	106724437	106699603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.57	chr1	-	1958	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	97	2578	36	-2578	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTCTCAGGGATG	121	False	NA	NA	False	ATTAAA	-13	NA	106724361	106699737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.58	chr1	-	1675	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	77	2881	16	-2881	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTGTGTTGTCCTTTT	101	False	NA	NA	False	NA	NA	NA	106724381	106700040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ES.1134.6	chr1	-	4464	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	9	1045	9	-1045	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCTTTGTGTCTTTCTT	8270	False	NA	NA	False	NA	NA	NA	106687448	106649233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.7	chr1	-	4135	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	36	1347	8	-1347	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTAATTTATACAGTTT	8297	False	NA	NA	False	ATTAAA	-21	NA	106687421	106649535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.8	chr1	-	2681	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	-11	2848	-11	-2848	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACCCCAACAAAC	8250	False	NA	NA	False	NA	NA	NA	106687468	106651036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ES.1134.9	chr1	-	5118	3	ISM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	21880	2848	21836	-2848	3prime_fragment	FALSE	canonical	3	165	junction_2	10	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACCCCAACAAAC	NA	False	NA	NA	False	NA	NA	NA	106665577	106651036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_106652752_106655358_106655461_106662276
ES.11340.1	chr14	+	4231	2	Antisense	novelGene_ENSMUSG00000022119.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	NA	False	NA	NA	False	AATAAA	-44	NA	105357387	105365131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_105358507_105362019
ES.11341.1	chr14	+	3411	1	Intergenic	novelGene_9450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGTTACCAGAGTAG	NA	False	NA	NA	False	NA	NA	NA	105372436	105375847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_105372400_105375800
ES.11341.2	chr14	+	4014	1	Intergenic	novelGene_9451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGATGCCACCTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	105372452	105376466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_105372500_105376500
ES.11342.1	chr14	-	7770	1	Genic_Genomic	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	NA	NA	NA	NA	4725	4784	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACATAATTTTCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	105347172	105339402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_105339400_105347200
ES.11342.10	chr14	-	5767	15	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-13913	0	multi-exon	FALSE	canonical	3	40	junction_2	69.9154372606432	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105381686	105344186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614
ES.11342.101	chr14	-	5305	20	NIC	ENSMUSG00000022119.16	novel	3634	21	NA	NA	28	0	intron_retention	FALSE	canonical	3	161	junction_10	27.5201261029128	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAATAGGACATATGCAA	NA	False	NA	NA	False	AGTAAA	-16	NA	105414731	105352421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.102	chr14	-	4307	20	ISM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	34	992	-25	157	5prime_fragment	FALSE	canonical	3	161	junction_10	27.5201261029128	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATTTGTCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	105414725	105353413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.103	chr14	-	4151	21	NNC	ENSMUSG00000022119.16	novel	3633	22	NA	NA	-201	155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	62.8831455956205	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATGATTTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	105414497	105353415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392389_105397273_105397411_105397930_105398050_105414217
ES.11342.104	chr14	-	4353	20	NNC	ENSMUSG00000022119.16	novel	3634	21	NA	NA	15	154	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	51.1405103665775	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACATGATTTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	105414744	105353416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.105	chr14	-	3747	17	ISM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	0	12763	0	-11614	5prime_fragment	FALSE	canonical	3	161	junction_7	21.8846407327148	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTATTACCTGATATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	105414759	105365184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.106	chr14	-	2895	17	ISM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	15	13600	15	-12451	5prime_fragment	FALSE	canonical	3	161	junction_7	21.8846407327148	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGAATTACAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	105414744	105366021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.107	chr14	-	4506	9	NNC	ENSMUSG00000022119.16	novel	3634	21	NA	NA	-26	-31501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.9975585471821	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAATAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105414726	105385071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390816_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.108	chr14	-	2432	8	NIC	ENSMUSG00000022119.16	novel	4212	21	NA	NA	3	-33867	intron_retention	FALSE	canonical	3	168	junction_5	18.4191559557557	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTATTTGTTTCTTATG	NA	False	NA	NA	False	NA	NA	NA	105414697	105387437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.109	chr14	-	4133	6	NIC	ENSMUSG00000022119.16	novel	4212	21	NA	NA	-1	-34324	intron_retention	FALSE	canonical	3	168	junction_3	16.375591592367	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTAAAAGTCACCAAG	NA	False	NA	NA	False	NA	NA	NA	105414764	105387894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105388326_105388754_105388995_105389727_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.11	chr14	-	7979	1	NIC	ENSMUSG00000022119.16	novel	3664	6	NA	NA	15608	0	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105352165	105344186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105344200_105352200
ES.11342.110	chr14	-	2031	8	NNC	ENSMUSG00000022119.16	novel	3634	21	NA	NA	-25	-34330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.2027088861205	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATCAATGTTTAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	105414725	105387900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_105388326_105388754_105388995_105389727_105389989_105390816_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.12	chr14	-	6468	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	0	-4	multi-exon	FALSE	canonical	3	18	junction_1	68.3180835812721	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTTAATGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	105414759	105344190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.13	chr14	-	7641	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-26	-6	multi-exon	FALSE	canonical	3	11	junction_2	61.7122415420447	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAGTTGTTAATGTT	NA	False	NA	NA	False	AATAAA	-11	NA	105414726	105344192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350961_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.14	chr14	-	8184	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	11	-8	intron_retention	FALSE	canonical	3	72	junction_1	38.0145574216473	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACAGTTGTTAATG	NA	False	NA	NA	False	AATAAA	-9	NA	105414748	105344194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.18	chr14	-	6792	26	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-25	-8	multi-exon	FALSE	non_canonical	0	0	junction_17	85.6004299054625	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACAGTTGTTAATG	NA	False	NA	NA	False	AATAAA	-9	NA	105414725	105344194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105351716_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377380_105377453_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381729_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.19	chr14	-	10998	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-24	-19	intron_retention	FALSE	canonical	3	49	junction_1	42.6432878657357	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAGTCTTAATAAAAAC	NA	False	NA	NA	False	ATTAAA	-41	NA	105414724	105344205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.2	chr14	-	7237	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-51	23	multi-exon	FALSE	canonical	3	18	junction_15	57.6097587004204	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTCTTATAACAGTT	NA	False	NA	NA	False	AATAAA	-40	NA	105414347	105344163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.20	chr14	-	3960	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	11	225	multi-exon	FALSE	canonical	3	18	junction_1	48.0837550530322	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTATTAAATTTGTCTAA	NA	False	NA	NA	False	AATAAA	-31	NA	105414748	105346600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.21	chr14	-	5300	25	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	22	225	multi-exon	FALSE	canonical	0	0	junction_23	77.7715672123602	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTATTAAATTTGTCTAA	NA	False	NA	NA	False	AATAAA	-31	NA	105414678	105346600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397409_105397930_105398050_105414217
ES.11342.22	chr14	-	4690	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	16888	225	multi-exon	FALSE	canonical	3	40	junction_2	65.7243806732025	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTATTAAATTTGTCTAA	NA	False	NA	NA	False	AATAAA	-31	NA	105397408	105346600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273
ES.11342.23	chr14	-	4015	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	25	222	multi-exon	FALSE	canonical	3	18	junction_1	58.9837211871154	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTATTAAATTTGTC	NA	False	NA	NA	False	AATAAA	-28	NA	105414734	105346603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.24	chr14	-	4260	20	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-23166	220	multi-exon	FALSE	canonical	3	40	junction_2	61.1601141005043	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105390939	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850
ES.11342.25	chr14	-	5192	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	15	220	multi-exon	FALSE	canonical	3	18	junction_15	57.6097587004204	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105414744	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.26	chr14	-	5162	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	21	220	multi-exon	FALSE	canonical	3	56	junction_11	53.0006237293721	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105414738	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.27	chr14	-	5280	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	11	220	multi-exon	FALSE	canonical	3	18	junction_16	65.0795064133822	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105414748	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.28	chr14	-	2611	1	NIC	ENSMUSG00000022119.16	novel	3664	6	NA	NA	18557	-2419	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105349216	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105346600_105349200
ES.11342.29	chr14	-	5255	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	9	220	multi-exon	FALSE	canonical	3	64	junction_11	55.5897067895234	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCTATTAAATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	105414750	105346605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.3	chr14	-	6443	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-25	20	multi-exon	FALSE	canonical	3	18	junction_1	58.9837211871154	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTATCTCTTATAACA	NA	False	NA	NA	False	AATAAA	-37	NA	105414725	105344166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.30	chr14	-	4968	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	8	4	multi-exon	FALSE	canonical	3	71	junction_2	45.2615904520371	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTTAATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	105414751	105346821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.31	chr14	-	5044	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-1	4	multi-exon	FALSE	canonical	3	56	junction_12	61.0485567068742	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTTAATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	105414764	105346821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.32	chr14	-	5106	25	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	25	3	multi-exon	FALSE	canonical	3	40	junction_2	62.9322828302154	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCTTTAATTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	105414734	105346822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.33	chr14	-	3774	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	3	3	multi-exon	FALSE	canonical	3	18	junction_1	68.3180835812721	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCTTTAATTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	105414697	105346822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.34	chr14	-	3856	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-25	0	multi-exon	FALSE	canonical	1	3	junction_9	73.9457585437567	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTGGCTTTAATTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	105414725	105346825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377380_105377453_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.35	chr14	-	5515	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	56	junction_10	47.9548162241601	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTTTGGCTTTAATTT	NA	False	NA	NA	False	ATTAAA	-9	NA	105414720	105346826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.36	chr14	-	3797	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	15	-2	multi-exon	FALSE	canonical	0	0	junction_1	61.4310446161416	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGTTTGGCTTTAATT	NA	False	NA	NA	False	ATTAAA	-8	NA	105414744	105346827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347235_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.37	chr14	-	2786	18	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-23151	-4	multi-exon	FALSE	canonical	1	4	junction_2	70.7788602537758	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGTTTGGCTTTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	105390924	105346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850
ES.11342.38	chr14	-	3708	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-25	-4	multi-exon	FALSE	canonical	3	18	junction_1	48.0837550530322	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGTTTGGCTTTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	105414725	105346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.39	chr14	-	5052	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	0	-4	multi-exon	FALSE	canonical	3	40	junction_2	55.9794048004688	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGTTTGGCTTTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	105414759	105346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.4	chr14	-	6445	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-4	16	multi-exon	FALSE	canonical	1	4	junction_2	67.8380424245865	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGGTATCTCTTAT	NA	False	NA	NA	False	AATAAA	-33	NA	105414704	105344170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.40	chr14	-	2282	2	ISM	ENSMUSG00000091509.8	ENSMUST00000165350.8	1113	4	485	4	270	-4	intron_retention	FALSE	canonical	3	49	junction_1	0	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGTTTGGCTTTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	105351627	105346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_105347239_105349754
ES.11342.41	chr14	-	4887	15	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-19939	-4	intron_retention	FALSE	canonical	3	40	junction_2	69.6375455849935	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGTTTGGCTTTAA	NA	False	NA	NA	False	ATTAAA	-6	NA	105387712	105346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688
ES.11342.42	chr14	-	5174	25	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	10	7	multi-exon	FALSE	canonical	0	0	junction_23	74.4358294662814	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTAAACATAAGTTT	NA	False	NA	NA	False	AAGAAA	-8	NA	105414749	105346837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105409481_105409622_105414217
ES.11342.44	chr14	-	5804	22	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000022715.14	3633	22	-2	-2169	-2	2071	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATTGCAG	NA	False	NA	NA	False	NA	NA	NA	105414765	105350329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.45	chr14	-	4625	22	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000022715.14	3633	22	19	-1011	15	913	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGATTTTTTTTTTAA	NA	False	NA	-1	True	TATAAA	-22	NA	105414744	105351487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.46	chr14	-	4568	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	15	913	multi-exon	FALSE	canonical	3	18	junction_13	48.1751751423905	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGATTTTTTTTTTAA	NA	False	NA	-1	True	TATAAA	-22	NA	105414744	105351487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.47	chr14	-	4572	21	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000100327.10	3634	21	-4	-934	0	913	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGATTTTTTTTTTAA	NA	False	NA	-1	True	TATAAA	-22	NA	105414763	105351487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.48	chr14	-	4526	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-26	913	multi-exon	FALSE	canonical	3	56	junction_9	41.0393408816467	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGATTTTTTTTTTAA	NA	False	NA	-1	True	TATAAA	-22	NA	105414726	105351487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.49	chr14	-	4574	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	21	910	multi-exon	FALSE	canonical	3	7	junction_14	49.9634616494894	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGTGATTTTTTTTT	NA	False	NA	-4	True	TATAAA	-19	NA	105414738	105351490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.5	chr14	-	6340	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-20	3	multi-exon	FALSE	canonical	3	18	junction_1	56.3227085641307	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAATGTTTTAAAATTA	NA	False	NA	NA	False	AATAAA	-20	NA	105414720	105344183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.50	chr14	-	4608	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	20	910	multi-exon	FALSE	canonical	3	56	junction_10	54.4124252183322	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGTGATTTTTTTTT	NA	False	NA	-4	True	TATAAA	-19	NA	105414739	105351490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.51	chr14	-	4587	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-24	908	multi-exon	FALSE	canonical	0	0	junction_2	69.5408654877771	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATACTGTGATTTTTTT	NA	False	NA	-6	True	TATAAA	-17	NA	105414724	105351492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105353318_105353387_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.53	chr14	-	4472	21	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000100327.10	3634	21	-5	-833	-1	812	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGATACTACTTTAGG	NA	False	NA	-29	True	AATAAA	-8	NA	105414764	105351588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.54	chr14	-	4315	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	11	680	multi-exon	FALSE	canonical	3	56	junction_9	41.0393408816467	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCTGATTAGTTT	NA	False	NA	NA	False	TATAAA	-25	NA	105414748	105351720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.55	chr14	-	4214	21	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000100327.10	3634	21	-52	-528	-48	507	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAGACCATTCCAGAT	NA	False	NA	NA	False	NA	NA	NA	105414811	105351893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.57	chr14	-	4164	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-7	507	multi-exon	FALSE	canonical	3	56	junction_9	41.0393408816467	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAGACCATTCCAGAT	NA	False	NA	NA	False	NA	NA	NA	105414770	105351893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.59	chr14	-	4240	22	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000022715.14	3633	22	-9	-598	-9	500	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414772	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.6	chr14	-	7663	24	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	21	1	multi-exon	FALSE	canonical	3	11	junction_3	67.040940571157	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGTTAATGTTTTAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	105414738	105344185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105349754_105349839_105350904_105350961_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.60	chr14	-	4208	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-25	500	multi-exon	FALSE	canonical	3	18	junction_14	59.1403649501752	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414725	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.61	chr14	-	4234	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	25	500	multi-exon	FALSE	canonical	0	0	junction_17	72.3656625454798	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414734	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390816_105391069_105392297_105392387_105397273_105397409_105397930_105398050_105414217
ES.11342.62	chr14	-	4064	8	ISM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000163545.8	3270	22	42487	-500	-4036	500	3prime_fragment	FALSE	canonical	3	206	junction_1	17.0353773551587	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105371809	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317
ES.11342.63	chr14	-	4229	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-7	500	multi-exon	FALSE	canonical	3	56	junction_10	54.4124252183322	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414770	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.64	chr14	-	4191	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-2	500	multi-exon	FALSE	canonical	3	7	junction_14	49.9634616494894	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414765	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.65	chr14	-	4176	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	0	500	multi-exon	FALSE	canonical	3	7	junction_14	57.8502160756552	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414759	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.66	chr14	-	4170	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	0	500	multi-exon	FALSE	canonical	3	18	junction_13	48.1751751423905	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414759	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.67	chr14	-	5058	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	23	500	multi-exon	FALSE	canonical	1	3	junction_9	55.3168158282695	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATGAAACAGACCAT	NA	False	NA	NA	False	NA	NA	NA	105414736	105351900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105377453_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.69	chr14	-	2417	13	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-15195	491	multi-exon	FALSE	non_canonical	0	0	junction_8	97.4187695809522	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	105382968	105351909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369465_105377751_105377884_105378631_105378797_105380126_105380294_105381614_105381727_105382837
ES.11342.7	chr14	-	6386	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	0	1	multi-exon	FALSE	canonical	3	18	junction_1	48.0837550530322	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGTTAATGTTTTAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	105414759	105344185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.70	chr14	-	4866	20	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	28	491	intron_retention	FALSE	canonical	3	161	junction_10	26.2549823790265	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	105414731	105351909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.71	chr14	-	4140	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-20	491	multi-exon	FALSE	canonical	0	0	junction_8	51.290228114135	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	105414720	105351909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377718_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.72	chr14	-	4275	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	11	491	multi-exon	FALSE	canonical	0	0	junction_2	70.4902695354015	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	105414748	105351909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105353318_105353387_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.73	chr14	-	4255	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3270	22	NA	NA	-100	490	multi-exon	FALSE	canonical	3	18	junction_13	56.449512841122	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAGAGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	105414863	105351910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.74	chr14	-	5346	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	23	489	intron_retention	FALSE	canonical	3	77	junction_8	37.7907396064168	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAGAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	105414736	105351911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.76	chr14	-	5648	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	191	481	intron_retention	FALSE	canonical	3	56	junction_9	55.5490774000793	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105414509	105351919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.77	chr14	-	3173	18	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-23114	481	multi-exon	FALSE	canonical	0	0	junction_9	61.4260745104047	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105390887	105351919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377718_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850
ES.11342.78	chr14	-	5202	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	0	447	multi-exon	FALSE	canonical	0	0	junction_4	59.1357637031334	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105414759	105351953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105364972_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.8	chr14	-	6375	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	4212	21	NA	NA	-19	0	multi-exon	FALSE	canonical	3	7	junction_14	62.40294464206	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105414719	105344186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.80	chr14	-	7338	6	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	1113	4	NA	NA	-1782	447	intron_retention	FALSE	canonical	3	209	junction_4	16.8641631870662	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105369555	105351953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317
ES.11342.81	chr14	-	4046	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	27	447	multi-exon	FALSE	non_canonical	0	0	junction_5	65.2931083652785	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105414732	105351953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366081_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387826_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.83	chr14	-	5862	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-25	447	multi-exon	FALSE	canonical	1	3	junction_9	63.7890158942183	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105414725	105351953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105375658_105377453_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.86	chr14	-	4197	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	-7	424	multi-exon	FALSE	canonical	0	0	junction_2	77.7814404555408	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGACAATGTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	105414707	105351976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105353318_105353387_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.87	chr14	-	3956	22	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000163545.8	3270	22	-262	-424	142	424	multi-exon	FALSE	canonical	3	18	junction_14	64.8996085016964	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGACAATGTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	105414558	105351976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.88	chr14	-	4029	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	19	407	multi-exon	FALSE	non_canonical	0	0	junction_16	66.0159829132309	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATGACAAAAAAAAATTC	NA	False	NA	NA	False	AATAAA	-43	NA	105414740	105351993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389985_105390850_105391069_105392297_105392387_105397273_105397411_105397940_105398050_105414217
ES.11342.89	chr14	-	4083	22	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000022715.14	3633	22	28	-478	24	380	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414735	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.9	chr14	-	7611	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	0	0	multi-exon	FALSE	canonical	3	71	junction_2	45.2615904520371	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105414759	105344186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105347239_105350904_105350964_105351555_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.91	chr14	-	4015	21	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	11	380	multi-exon	FALSE	canonical	3	56	junction_9	41.0393408816467	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414748	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.92	chr14	-	5240	19	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3634	21	NA	NA	-56	380	intron_retention	FALSE	non_canonical	0	0	junction_8	68.8840724122693	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414352	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377886_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105397273_105397411_105397930_105398050_105414217
ES.11342.93	chr14	-	4035	21	FSM	ENSMUSG00000022119.16_ENSMUSG00000091509.8	ENSMUST00000100327.10	3634	21	0	-401	0	380	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414759	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.94	chr14	-	4046	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	17	380	multi-exon	FALSE	canonical	3	18	junction_14	59.1403649501752	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414683	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.95	chr14	-	4090	22	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	8	380	multi-exon	FALSE	canonical	3	56	junction_10	54.4124252183322	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414751	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.96	chr14	-	4138	23	Fusion	ENSMUSG00000022119.16_ENSMUSG00000091509.8	novel	3633	22	NA	NA	18	380	multi-exon	FALSE	canonical	0	0	junction_21	71.1666069896073	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105414741	105352020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105403359_105403409_105414217
ES.11342.97	chr14	-	3799	22	FSM	ENSMUSG00000022119.16	ENSMUST00000022715.14	3633	22	-80	-86	-80	9	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATATGCAATGTTTTTAT	NA	False	NA	NA	False	AGTAAA	-25	NA	105414843	105352412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.98	chr14	-	3606	21	FSM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	34	-6	-25	6	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGACATATGCAATGTTTT	NA	False	NA	NA	False	AGTAAA	-22	NA	105414725	105352415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11342.99	chr14	-	3701	22	NIC	ENSMUSG00000022119.16	novel	3633	22	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	54.4124252183322	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGACATATGCAATGTT	NA	False	NA	NA	False	AGTAAA	-20	NA	105414759	105352417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ES.11343.1	chr14	+	2747	3	Antisense	novelGene_ENSMUSG00000115247.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTCTTTCTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	105428378	105438897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_105428504_105435320_105435542_105436496
ES.11343.2	chr14	+	2785	3	Antisense	novelGene_ENSMUSG00000115247.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTTTGTTGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	105428557	105438903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_105428715_105435320_105435542_105436496
ES.11344.1	chr14	+	2399	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	131	2	-49	-2	multi-exon	TRUE	canonical	3	271	junction_7	54.1807255433901	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	8	True	AATAAA	-15	NA	105496138	105546730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.10	chr14	+	6362	8	NNC	ENSMUSG00000053253.17	novel	2532	8	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	148.84864247734	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGTATTTTATGAT	NA	False	NA	17	True	AATAAA	-24	NA	105496187	105546739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105536124_105536291_105539800_105542164_105542271_105545319
ES.11344.11	chr14	+	2119	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	1	-425	1	-2	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	8	True	AATAAA	-15	NA	105496188	105546730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
ES.11344.12	chr14	+	4289	7	NIC	ENSMUSG00000053253.17	novel	2532	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	271	junction_6	56.5520900488115	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTACAATCATTTTTCTT	NA	False	NA	-62	True	AATAAA	-17	NA	105496188	105546237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_105496438_105525050_105525214_105529665_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.13	chr14	+	1825	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	182	525	2	-30	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCCAATAAAGATATC	NA	False	NA	-92	True	AATATA	-23	NA	105496189	105546207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.14	chr14	+	1921	8	NNC	ENSMUSG00000053253.17	novel	2532	8	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	147.481164483981	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGCCTCGTTTAGTGA	NA	False	NA	4	True	AATAAA	-14	NA	105496212	105546303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545296
ES.11344.15	chr14	+	5322	7	ISM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	257	2	12	-2	intron_retention	FALSE	canonical	3	401	junction_1	17.1949605020386	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	8	True	AATAAA	-15	NA	105496264	105546730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164
ES.11344.16	chr14	+	1647	4	NNC	ENSMUSG00000053253.17	novel	7759	4	NA	NA	6314	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.607411588386	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTTGTATTTCTTGTA	NA	False	NA	8	True	AATAAA	-15	NA	105538293	105546730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_105538357_105539732_105539800_105542164_105542271_105545319
ES.11344.17	chr14	+	862	2	ISM	ENSMUSG00000053253.17	ENSMUST00000127286.8	3198	5	11978	4	10113	-4	3prime_fragment	FALSE	canonical	3	137	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACTACAATCATTTT	NA	False	NA	-66	True	AATAAA	-13	NA	105542092	105546233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_105542271_105545549
ES.11344.2	chr14	+	1960	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	148	424	-32	3	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCGTTTAGTGATTCCA	NA	False	NA	9	True	AATAAA	-19	NA	105496155	105546308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.3	chr14	+	1725	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-27	-3	-27	3	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCGTTTAGTGATTCCA	NA	False	NA	9	True	AATAAA	-19	NA	105496160	105546308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
ES.11344.4	chr14	+	2250	9	NNC	ENSMUSG00000053253.17	novel	2532	8	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.002160887697	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTCTTGTATTTCTTG	NA	False	NA	6	True	AATAAA	-13	NA	105496178	105546728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_105496244_105496350_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.5	chr14	+	1099	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	174	1259	-6	-764	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTTCTGTTCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	105496181	105545473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.7	chr14	+	1599	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	179	754	-1	-259	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGTTTAGGATGGGC	NA	False	NA	NA	False	TTTAAA	-2	NA	105496186	105545978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ES.11344.8	chr14	+	5506	7	NNC	ENSMUSG00000053253.17	novel	1695	8	NA	NA	-1	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	185.861657034353	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTCTTTAAATGTTT	NA	False	NA	-53	True	AATAAA	-26	NA	105496186	105546246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_105496438_105525050_105525214_105532232_105532327_105535436_105536124_105536291_105539800_105542164_105542271_105545549
ES.11344.9	chr14	+	4973	7	ISM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	-1	2	-1	0	intron_retention	FALSE	canonical	3	401	junction_1	17.1949605020386	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGCCTCGTTTAGTGA	NA	False	NA	4	True	AATAAA	-14	NA	105496186	105546303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164
ES.11345.1	chr14	-	1758	1	Intergenic	novelGene_9452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTAGTTATTTCCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	105664970	105663212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_105663200_105665000
ES.11346.1	chr14	+	399	1	FSM	ENSMUSG00000060143.8	ENSMUST00000227553.2	383	1	0	-16	0	16	mono-exon	FALSE	NA	NA	NA	NA	NA	580	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACTGCAAGCATGCA	NA	False	NA	NA	False	AATAAA	-37	NA	105919262	105919661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_105919300_105919700
ES.11347.1	chr14	-	397	1	Intergenic	novelGene_9453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTGGTGACGGGTCTG	6922	False	NA	NA	False	AATAAA	-21	NA	106094262	106093865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_106093900_106094300
ES.11348.1	chr14	-	890	2	Intergenic	novelGene_9454	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAAAAAATTCAT	5612	False	NA	NA	False	NA	NA	NA	106095572	106094646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_106094925_106094960
ES.11348.2	chr14	-	1062	2	Intergenic	novelGene_9455	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGTTTTGGTTTGTTTT	4571	False	NA	NA	False	ATTAAA	-17	NA	106096613	106095073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_106096114_106096591
ES.11349.1	chr14	-	158	1	Intergenic	novelGene_9456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	2059	False	NA	NA	False	NA	NA	NA	106099125	106098967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_106099000_106099100
ES.1135.1	chr1	+	1401	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTGTGTACATATT	NA	False	NA	NA	False	CATAAA	-8	NA	106724506	106725907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_106724500_106725900
ES.11350.1	chr14	+	2924	1	Antisense	novelGene_ENSMUSG00000022114.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAGAGAAA	6226	False	NA	NA	False	NA	NA	NA	106127135	106130059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_106127100_106130100
ES.11351.1	chr14	-	2391	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-306	2	-306	-2	multi-exon	FALSE	canonical	3	119	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGCTTGTTTTGTCT	NA	False	NA	-6	True	TATAAA	-28	NA	106134559	106129382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_106131236_106134021
ES.11351.2	chr14	-	2054	2	NNC	ENSMUSG00000022114.6	novel	2087	2	NA	NA	759	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGAGCTTGTTTTGTC	NA	False	NA	-7	True	TATAAA	-27	NA	106133494	106129383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_106131236_106133292
ES.11351.3	chr14	-	2211	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-306	182	-306	-182	multi-exon	FALSE	canonical	3	119	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTAGTGTAAAGAAT	NA	False	NA	-3	True	AGTAAA	-32	NA	106134559	106129562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_106131236_106134021
ES.11351.4	chr14	-	1311	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	-307	1083	-307	-1083	multi-exon	FALSE	canonical	3	119	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCTTGCAGCCAGTCC	NA	False	NA	NA	False	NA	NA	NA	106134560	106130463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_106131236_106134021
ES.11351.5	chr14	-	2863	1	Genic_Genomic	ENSMUSG00000022114.6	novel	NA	NA	NA	NA	-304	-2314	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTTGA	NA	False	NA	NA	False	AAAAAG	-39	NA	106134557	106131694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_106131700_106134600
ES.11352.1	chr14	+	124	1	Intergenic	novelGene_9457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGTGTTTGATG	NA	False	NA	NA	False	NA	NA	NA	106163540	106163664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_106163500_106163700
ES.11353.1	chr14	+	3178	1	FSM	ENSMUSG00000022113.7	ENSMUST00000022708.7	3075	1	-22	-81	-22	81	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGTTGAAAGAAGTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	106343609	106346787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_106343600_106346800
ES.11353.2	chr14	+	2593	2	NNC	ENSMUSG00000022113.7	novel	584	2	NA	NA	5	48	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGATTGAATAAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	106343637	106346754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_106343774_106344297
ES.11354.1	chr14	+	7664	2	Genic_Genomic	ENSMUSG00000022113.7	novel	584	2	NA	NA	21925	-2	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTCTCGTGATTC	NA	False	NA	NA	False	NA	NA	NA	106365557	106373291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_106369957_106370026
ES.11354.2	chr14	+	6024	1	NIC	ENSMUSG00000022113.7	novel	584	2	NA	NA	23637	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTCTCGTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	106367269	106373293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_106367300_106373300
ES.11355.1	chr14	-	131	1	Intergenic	novelGene_9458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108316510	108316379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_108316400_108316500
ES.11356.1	chr14	+	4621	1	Intergenic	novelGene_9459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	109292343	109296964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_109292300_109297000
ES.11357.1	chr14	-	3310	1	Intergenic	novelGene_9460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	112573615	112570305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112570300_112573600
ES.11358.1	chr14	+	2740	1	Intergenic	novelGene_9467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGGCCGCCAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	112606043	112608783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_112606000_112608800
ES.11358.2	chr14	+	2928	1	Intergenic	novelGene_9468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTGGTCCAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	112606043	112608971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_112606000_112609000
ES.11359.1	chr14	-	5389	1	Intergenic	novelGene_9461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCGTCTAGATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	112609031	112603642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112603600_112609000
ES.11359.2	chr14	-	3477	2	Intergenic	novelGene_9462	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	112608908	112603671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112603718_112605477
ES.11359.3	chr14	-	5005	2	Intergenic	novelGene_9463	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	51	junction_1	0	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	112608908	112603671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112605106_112605337
ES.11359.4	chr14	-	5165	2	Intergenic	novelGene_9464	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAACTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	112608908	112603675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112608405_112608472
ES.11359.5	chr14	-	2976	1	Intergenic	novelGene_9465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGATCTACTTATTG	NA	False	NA	NA	False	NA	NA	NA	112608909	112605933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112605900_112608900
ES.11359.6	chr14	-	2868	1	Intergenic	novelGene_9466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCATGCTATTTAGTGC	NA	False	NA	NA	False	NA	NA	NA	112608909	112606041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112606000_112608900
ES.11359.7	chr14	-	2367	1	Intergenic	novelGene_9469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTAAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	112608909	112606542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112606500_112608900
ES.1136.1	chr1	-	174	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	106746533	106746359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_106746400_106746500
ES.11360.1	chr14	-	175	1	Intergenic	novelGene_9470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAAAACCTTAC	NA	False	NA	NA	False	NA	NA	NA	112770749	112770574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_112770600_112770700
ES.11361.1	chr14	-	171	1	Intergenic	novelGene_9471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAGAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	113332176	113332005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_113332000_113332200
ES.11362.1	chr14	+	4880	2	Intergenic	novelGene_9472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	113525813	113530752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_113530644_113530702
ES.11362.2	chr14	+	4424	1	Intergenic	novelGene_9473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	113526330	113530754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_113526300_113530800
ES.11363.1	chr14	+	2134	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	0	13	0	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAAGAAGATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	113552039	113554173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_113552000_113554200
ES.11363.2	chr14	+	1767	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	1	379	1	-379	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-29	True	NA	NA	NA	113552040	113553807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_113552000_113553800
ES.11363.3	chr14	+	2069	2	Genic_Genomic	ENSMUSG00000058126.8	novel	2147	1	NA	NA	2	-13	multi-exon	FALSE	canonical	0	0	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAAGAAGATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	113552041	113554173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_113552246_113552308
ES.11364.1	chr14	-	181	1	Intergenic	novelGene_9474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGGTCTATG	NA	False	NA	NA	False	NA	NA	NA	114184556	114184375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_114184400_114184600
ES.11365.1	chr14	-	159	1	Intergenic	novelGene_9475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	114772208	114772049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_114772000_114772200
ES.11366.1	chr14	+	179	1	Intergenic	novelGene_9476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATCAGTAATAAAC	NA	False	NA	NA	False	NA	NA	NA	114902957	114903136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_114903000_114903100
ES.11367.1	chr14	+	2442	1	FSM	ENSMUSG00000076256.3	ENSMUST00000102301.3	87	1	-18	-2337	-18	2337	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTATCTTGTTTTTT	NA	False	NA	8	True	AATAAA	-20	NA	115281718	115284160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_115281700_115284200
ES.11368.1	chr14	-	3479	1	Antisense	novelGene_ENSMUSG00000076062.3_AS_novelGene_ENSMUSG00000065416.3_AS_novelGene_ENSMUSG00000065403.3_AS_novelGene_ENSMUSG00000065442.3_AS_novelGene_ENSMUSG00000076256.3_AS_novelGene_ENSMUSG00000065508.3_AS_novelGene_ENSMUSG00000089726.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGCCAGGACCACAAG	NA	False	NA	NA	False	NA	NA	NA	115283637	115280158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_115280200_115283600
ES.11369.1	chr14	+	4159	1	Intergenic	novelGene_9477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACAGCCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	115286172	115290331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_115286200_115290300
ES.1137.1	chr1	+	1332	7	FSM	ENSMUSG00000067006.13	ENSMUST00000086701.13	2572	7	-2	1242	-2	-1241	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGTCCACATTTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	106788900	106809836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_106788991_106798011_106798181_106799979_106800118_106802772_106802891_106803739_106803883_106807905_106808074_106809330
ES.11370.1	chr14	+	2344	1	Intergenic	novelGene_9478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGGAGGGGAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	117995418	117997762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_117995400_117997800
ES.11371.1	chr14	+	4921	5	NNC	ENSMUSG00000058571.12	novel	1668	9	NA	NA	962627	2984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	3	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGCGCTTCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	118125974	118216940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118126078_118188549_118188687_118202110_118202287_118212295_118214264_118214403
ES.11371.2	chr14	+	4493	3	NNC	ENSMUSG00000058571.12	novel	1668	9	NA	NA	1038918	2976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTACTGTTGCGCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	118202265	118216932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118202287_118212295_118214291_118214455
ES.11372.1	chr14	+	164	1	Intergenic	novelGene_9479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	118331658	118331822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_118331700_118331800
ES.11373.1	chr14	-	2214	14	NNC	ENSMUSG00000022130.11	novel	350	2	NA	NA	1	4992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.1254261637934	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	251	False	NA	NA	False	NA	NA	NA	118370158	118344330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118345039_118345283_118345412_118345864_118346244_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ES.11373.10	chr14	-	2312	4	NIC	ENSMUSG00000022130.11	novel	2153	11	NA	NA	15617	-6	intron_retention	FALSE	canonical	3	179	junction_1	5.71547606649408	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAGTAATGTCTTT	NA	False	NA	-10	True	ATTAAA	-14	NA	118354539	118349893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118351823_118352528_118352588_118353490_118353657_118354381
ES.11373.11	chr14	-	1589	11	NIC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	7	-16	combination_of_known_splicesites	FALSE	canonical	3	3	junction_10	53.9929625043857	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGGCTTTTTTTTAG	260	False	NA	-20	True	ATTAAA	-4	NA	118370149	118349903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118370055
ES.11373.13	chr14	-	1813	12	NNC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.416189083445	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCAGATTGTGGCTTTT	251	False	NA	-26	True	AATATA	-13	NA	118370158	118349909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354227_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ES.11373.2	chr14	-	3740	2	NIC	ENSMUSG00000022130.11	novel	2153	11	NA	NA	14866	3	intron_retention	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTTTTTATTTTGTTG	NA	False	NA	1	True	ATTAAA	-25	NA	118355290	118349882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118351823_118353490
ES.11373.3	chr14	-	3693	8	NNC	ENSMUSG00000022130.11	novel	2153	11	NA	NA	8697	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.6799450398936	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	8950	False	NA	-2	True	ATTAAA	-22	NA	118361459	118349885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354227_118354426_118355148_118355209_118357051_118357151_118359130
ES.11373.4	chr14	-	3033	8	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	9206	-2	9203	0	3prime_fragment	FALSE	canonical	3	165	junction_7	8.2931001564	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	9456	False	NA	-2	True	ATTAAA	-22	NA	118360953	118349885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130
ES.11373.5	chr14	-	1713	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	-29	-2	-21	0	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	221	False	NA	-2	True	ATTAAA	-22	NA	118370188	118349885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ES.11373.6	chr14	-	1625	11	NIC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	56.1053473387341	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	250	False	NA	-2	True	ATTAAA	-22	NA	118370159	118349885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118350570_118351724_118351823_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ES.11373.7	chr14	-	3131	10	NIC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	141	junction_6	16.3985847025563	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	251	False	NA	-2	True	ATTAAA	-22	NA	118370158	118349885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ES.11373.8	chr14	-	1530	10	NIC	ENSMUSG00000022130.11	novel	2153	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	76.5062734456672	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATGTCTTTTTATTTT	253	False	NA	-3	True	ATTAAA	-21	NA	118370156	118349886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118350570_118351724_118351823_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118365634_118365704_118368018_118368086_118370055
ES.11373.9	chr14	-	807	2	NIC	ENSMUSG00000022130.11	novel	1682	12	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTCTTTTTATTT	229	False	NA	-4	True	ATTAAA	-20	NA	118370180	118349887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118350570_118370055
ES.11374.1	chr14	+	2067	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	-194	2	-194	-2	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATTAGCATTTGTTTA	NA	False	NA	3	True	AATAAA	-22	NA	118374375	118400671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.10	chr14	+	2306	10	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	75.0631010270857	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGAATTAGCATTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	118374570	118400669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118375354_118375791_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.11	chr14	+	2061	10	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.6533680596273	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGAATTAGCATTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	118374570	118400669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390257_118390449_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.12	chr14	+	5601	8	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	2	-4	intron_retention	TRUE	non_canonical	0	0	junction_4	80.4943907286434	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGAATTAGCATTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	118374571	118400669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118393180_118393519_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.13	chr14	+	4187	7	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	5	-3	intron_retention	FALSE	canonical	1	1	junction_3	71.8781762583207	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	2	True	AATAAA	-21	NA	118374574	118400670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118377308_118385496_118385698_118390980_118391162_118395334_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.14	chr14	+	1777	8	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	11	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.5708154478203	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTTAAACGAATTAGC	NA	False	NA	-6	True	AATAAA	-13	NA	118374580	118400662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395334_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.15	chr14	+	4253	8	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	15	-3	intron_retention	FALSE	canonical	3	145	junction_4	22.2049819745434	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	2	True	AATAAA	-21	NA	118374584	118400670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.16	chr14	+	3957	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	14309	7711	14309	-7711	internal_fragment	FALSE	canonical	3	168	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAGCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118388878	118392962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_118391162_118391288
ES.11374.17	chr14	+	2727	3	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	20480	-5	intron_retention	FALSE	canonical	3	163	junction_2	11.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGAATTAGCATTTGT	NA	False	NA	0	True	AATAAA	-19	NA	118395049	118400668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_118395467_118397404_118399047_118400000
ES.11374.2	chr14	+	1899	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-52	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	53.8678939629164	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	2	True	AATAAA	-21	NA	118374517	118400670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.3	chr14	+	2950	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	60.6460015170003	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAATTAGCATTTGTTT	NA	False	NA	2	True	AATAAA	-21	NA	118374529	118400670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118375791_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.5	chr14	+	2886	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	78.9571679773281	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGAATTAGCATTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	118374541	118400669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118375791_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395334_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.6	chr14	+	1852	8	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-25	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.9044399246616	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCATTTGTTTATTCA	NA	False	NA	7	True	AATAAA	-26	NA	118374544	118400675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.7	chr14	+	2970	8	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	-19	1152	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.5708154478203	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAACCCAGTGAATGCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	118374550	118401825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395334_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.8	chr14	+	3036	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	-9	-1152	-9	1152	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAACCCAGTGAATGCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	118374560	118401825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ES.11374.9	chr14	+	939	1	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	1	-25164	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGGCATGGGAAGGAAA	NA	False	NA	1	True	NA	NA	NA	118374570	118375509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_118374600_118375500
ES.11375.1	chr14	+	3142	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	-1185	365	-1185	-365	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAAATTACTGTCTCTG	NA	False	NA	NA	False	ATTAAA	-23	NA	118472458	118475806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_118474357_118474562
ES.11375.2	chr14	+	668	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	483	1171	-165	-1171	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTTGTCTTCTGTCT	NA	False	NA	0	True	AATACA	-10	NA	118474126	118475000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_118474357_118474562
ES.11375.3	chr14	+	1693	2	FSM	ENSMUSG00000090534.2	ENSMUST00000164755.2	2322	2	538	91	-110	-91	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTGTATATATGACT	NA	False	NA	NA	False	AATAAA	-15	NA	118474181	118476080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_118474357_118474562
ES.11376.1	chr14	-	3842	1	FSM	ENSMUSG00000061517.9	ENSMUST00000170662.2	3799	1	-43	0	-43	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTATTTCTTGTTGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	118474485	118470643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118470600_118474500
ES.11376.2	chr14	-	3548	1	FSM	ENSMUSG00000061517.9	ENSMUST00000170662.2	3799	1	105	146	105	-146	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTAAATGGTTTTCTT	NA	False	NA	NA	False	GATAAA	-33	NA	118474337	118470789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118470800_118474300
ES.11377.1	chr14	-	169	1	Intergenic	novelGene_9480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAGGAACTTTGG	2636	False	NA	NA	False	NA	NA	NA	118691156	118690987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_118691000_118691200
ES.11378.1	chr14	+	3617	2	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGACAAAGGGCACGG	NA	False	NA	NA	False	NA	NA	NA	118756429	118760118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_118758238_118758309
ES.11379.1	chr14	+	1677	1	Intergenic	novelGene_9481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACAATTCACTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	118928604	118930281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_118928600_118930300
ES.1138.1	chr1	+	178	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAATATAGAGC	NA	False	NA	NA	False	NA	NA	NA	107488429	107488607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_107488400_107488600
ES.11380.1	chr14	+	1871	1	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAAAAAATC	5343	False	NA	NA	False	NA	NA	NA	118943301	118945172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_118943300_118945200
ES.11380.2	chr14	+	634	1	Intergenic	novelGene_9482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTAGCTTGTCCGA	5869	False	NA	NA	False	AATAAA	-10	NA	118943827	118944461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_118943800_118944500
ES.11381.1	chr14	-	5922	32	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	32	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_31	65.6549013935984	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGTTTGTTCGCTGAG	NA	False	NA	-2	True	AATAAA	-24	NA	118943585	118720097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118934380_118934614_118943447
ES.11381.10	chr14	-	5977	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.185513900769	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943839	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771595_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.11	chr14	-	3383	16	NNC	ENSMUSG00000032849.15	novel	5504	30	NA	NA	-62898	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.456155943503	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118834565	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721006_118721043_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550
ES.11381.14	chr14	-	5642	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	2478	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	53.0189588732182	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACAGATCTGTTTGT	3329	False	NA	-10	True	AATAAA	-16	NA	118934426	118720105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118934327
ES.11381.15	chr14	-	5556	30	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	50.8782323820418	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACAGATCTGTTTGT	NA	False	NA	-10	True	AATAAA	-16	NA	118943595	118720105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.16	chr14	-	5585	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	754	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	53.0189588732182	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACAGATCTGTTTGT	9498	False	NA	-10	True	AATAAA	-16	NA	118913589	118720105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118913547
ES.11381.17	chr14	-	5430	29	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	51.0329400425623	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACAGATCTGTTTGT	NA	False	NA	-10	True	AATAAA	-16	NA	118943613	118720105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.19	chr14	-	5663	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	7964	-80	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_30	52.7191826778662	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTATTTCATTTCTAT	8815	False	NA	-6	True	ATTAAA	-17	NA	118928940	118720183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118928742
ES.11381.2	chr14	-	6026	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-306	-5	-292	5	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTGTTTGTTCGCTGA	NA	False	NA	-3	True	AATAAA	-23	NA	118943923	118720098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.20	chr14	-	5565	29	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-179	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	69.9090881949185	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTATTTCATTTCTAT	NA	False	NA	-6	True	ATTAAA	-17	NA	118943810	118720183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868524_118869509_118869600_118891561_118891787_118943447
ES.11381.22	chr14	-	6124	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-227	-81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.7013937394771	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTATTTCATTTCTA	NA	False	NA	-7	True	ATTAAA	-16	NA	118943858	118720184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118734993_118735385_118737377_118737484_118738119_118738293_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836884_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.23	chr14	-	5162	28	NIC	ENSMUSG00000032849.15	novel	5504	30	NA	NA	14	-82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	55.1947791809517	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTATTTCATTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	118943603	118720185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118943447
ES.11381.26	chr14	-	5884	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-247	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	53.2318722404371	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTATTTCATTTCT	NA	False	NA	-8	True	ATTAAA	-15	NA	118943878	118720185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765454_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.27	chr14	-	6085	32	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	2477	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.7558788067125	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTATTTCATTTCT	3328	False	NA	-8	True	ATTAAA	-15	NA	118934427	118720185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118734993_118735569_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118934380
ES.11381.3	chr14	-	5999	32	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-145	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.4603188784995	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGATCTGTTTGTTCG	NA	False	NA	-7	True	AATAAA	-19	NA	118943776	118720102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118743584_118743709_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.30	chr14	-	4904	26	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	53	-83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	57.3229447952563	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCCTATTTCATTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	118943564	118720186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.31	chr14	-	5631	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	38	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.0823783273591	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTTCCTATTTCATT	NA	False	NA	-11	True	ATTAAA	-12	NA	118943579	118720188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767429_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.33	chr14	-	5602	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-7113	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	53.0189588732182	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTTCCTATTTCATT	NA	False	NA	-11	True	ATTAAA	-12	NA	118950744	118720188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118950602
ES.11381.34	chr14	-	4981	29	NIC	ENSMUSG00000032849.15	novel	5504	30	NA	NA	-5	-424	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	67.5812813716693	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTGTGTATATATA	NA	False	NA	1	True	AATAAA	-17	NA	118943622	118720527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118905758_118905880_118906408_118906520_118943447
ES.11381.35	chr14	-	5596	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-306	425	-292	-425	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTGTGTGTATATAT	NA	False	NA	0	True	AATAAA	-16	NA	118943923	118720528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.36	chr14	-	5201	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-6785	-426	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	53.0189588732182	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTGTGTGTATATA	4342	False	NA	-1	True	AATAAA	-15	NA	118921128	118720529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118921046
ES.11381.37	chr14	-	5429	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	7852	-426	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_30	52.7191826778662	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTGTGTGTATATA	8703	False	NA	-1	True	AATAAA	-15	NA	118929052	118720529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118928742
ES.11381.38	chr14	-	5077	28	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-158	-426	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	55.8578442605163	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGTGTGTGTATATA	NA	False	NA	-1	True	AATAAA	-15	NA	118943789	118720529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.40	chr14	-	5317	29	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-247	-427	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	54.4243999151341	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATGTGTGTGTGTATAT	NA	False	NA	-2	True	AATAAA	-14	NA	118943878	118720530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118943447
ES.11381.44	chr14	-	5179	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	2462	-428	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_30	51.0840701415052	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATGTGTGTGTGTATA	3313	False	NA	-3	True	AATAAA	-13	NA	118934442	118720531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118934380
ES.11381.45	chr14	-	5161	30	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	11	-428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.3530064938741	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATGTGTGTGTGTATA	NA	False	NA	-3	True	AATAAA	-13	NA	118943606	118720531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728033_118737389_118737484_118738119_118738293_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.49	chr14	-	4275	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	3	1437	3	204	multi-exon	FALSE	canonical	3	201	junction_24	29.291276668812	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTCCTGCTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	118943614	118721540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.5	chr14	-	5672	31	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	53.0800234446905	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGATCTGTTTGTTCG	NA	False	NA	-7	True	AATAAA	-19	NA	118943600	118720102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868528_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.50	chr14	-	5946	29	NNC	ENSMUSG00000032849.15	novel	4592	31	NA	NA	-124	-13486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	52.0870542888518	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTTTTAAAAGATTTG	8620	False	NA	NA	False	NA	NA	NA	118914467	118735230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118914329
ES.11381.51	chr14	-	6315	30	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-230	-13486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.7531537186664	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTTTTAAAAGATTTG	NA	False	NA	NA	False	NA	NA	NA	118943861	118735230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118737484_118738119_118738293_118743584_118743709_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868524_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.52	chr14	-	5953	29	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-7	15159	-7	-13518	5prime_fragment	FALSE	canonical	3	201	junction_22	26.4269304509855	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118943624	118735262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.53	chr14	-	3598	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-276	45051	-262	15	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATGTCAGCAGGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	118943893	118765154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.54	chr14	-	3409	24	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	7890	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	52.6724371305365	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTCATGTATGCT	8741	False	NA	NA	False	AATAAA	-15	NA	118929014	118765169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118928742
ES.11381.55	chr14	-	3440	24	ISM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	-226	45159	-212	-93	5prime_fragment	FALSE	canonical	3	201	junction_17	22.6862382608316	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCGCGGCTAACAGAGGT	NA	False	NA	NA	False	ATTAAA	-14	NA	118943843	118765262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.56	chr14	-	11067	23	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	23	-15346	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.5848284900975	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGTCTGCTCTCTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	118943594	118781580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118784644_118785126_118785676_118785745_118785823_118785925_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.57	chr14	-	3430	21	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-293	-15346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.9802420502091	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCGTCTGCTCTCTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	118943924	118781580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118782073_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.58	chr14	-	7999	1	FSM	ENSMUSG00000098433.3	ENSMUST00000184391.3	104	1	-5156	-2739	-5156	2739	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAAACAACCCCTTTC	NA	False	NA	NA	False	NA	NA	NA	118835040	118827041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118827000_118835000
ES.11381.59	chr14	-	2404	14	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-230	-80671	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	63.4257708062493	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAATGAATGCCC	NA	False	NA	NA	False	NA	NA	NA	118943861	118846905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118847243_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.6	chr14	-	5896	30	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-257	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_4	51.1320595601552	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943888	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ES.11381.7	chr14	-	5534	30	NNC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	7989	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	53.487727375408	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118906354	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906254
ES.11381.8	chr14	-	5790	29	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-293	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	54.4243999151341	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943924	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118943447
ES.11381.9	chr14	-	5733	30	FSM	ENSMUSG00000032849.15	ENSMUST00000166646.2	5504	30	-229	0	-229	0	multi-exon	FALSE	canonical	2	5	junction_27	53.1124264689735	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943860	118720103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118905758_118905880_118906408_118906520_118943447
ES.11382.1	chr14	+	201	1	Antisense	novelGene_ENSMUSG00000042156.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCAAGGCCACACAAAG	NA	False	NA	NA	False	NA	NA	NA	119154067	119154268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_119154100_119154300
ES.11383.1	chr14	-	3505	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	55	84	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	12.9735471313773	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCCTGCAAACAGTGTC	NA	False	NA	NA	False	AAAAAG	-24	NA	119162744	119112847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119113122_119114405_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.10	chr14	-	4033	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	546	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	11.5259738227344	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162253	119113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162052
ES.11383.11	chr14	-	4182	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	21	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	11.0719845996644	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162778	119113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161430_119161836_119161931_119162552
ES.11383.13	chr14	-	6845	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	55	3	intron_retention	FALSE	canonical	0	0	junction_6	12.7590615169632	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162744	119113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124036_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.14	chr14	-	4365	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	9.99721035469561	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162883	119113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.15	chr14	-	7592	27	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	24	3	intron_retention	FALSE	canonical	0	0	junction_2	18.3490563741704	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGTGGCTGCTTATT	NA	False	NA	-3	True	AGTAAA	-17	NA	119162775	119113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116016_119116127_119116755_119116925_119117262_119118268_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119150524_119152687_119156301_119156339_119158018_119158125_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.16	chr14	-	4062	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	538	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	12.5071880159417	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGACTGTGGCTGCTTAT	NA	False	NA	-4	True	AGTAAA	-16	NA	119162261	119113667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162232
ES.11383.17	chr14	-	3930	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	49	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8456738970161	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGACTGTGGCTGCTTAT	NA	False	NA	-4	True	AGTAAA	-16	NA	119162750	119113667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116759_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160106_119160322_119160580_119161836_119161931_119162552
ES.11383.18	chr14	-	7066	16	NIC	ENSMUSG00000042156.17	novel	4476	20	NA	NA	-1263	2	intron_retention	FALSE	canonical	3	31	junction_9	5.70224127475816	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGACTGTGGCTGCTTAT	NA	False	NA	-4	True	AGTAAA	-16	NA	119152425	119113667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119148916_119149853
ES.11383.19	chr14	-	3847	21	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-72	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.2551744991073	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGACTGTGGCTGCTTAT	NA	False	NA	-4	True	AGTAAA	-16	NA	119162944	119113667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162871
ES.11383.2	chr14	-	3399	16	ISM	ENSMUSG00000042156.17	ENSMUST00000047208.12	4476	20	11728	-3	1716	3	3prime_fragment	FALSE	canonical	3	31	junction_9	5.72945605329744	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTTTTTTTTGTTTGT	NA	False	NA	NA	False	AATATA	-20	NA	119148851	119112928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753
ES.11383.20	chr14	-	3982	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	75	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	11.9483013337422	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGACTGTGGCTGCTTA	NA	False	NA	-5	True	AGTAAA	-15	NA	119162724	119113668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149959_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.24	chr14	-	4362	24	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	14.0319645896698	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	-6	True	AGTAAA	-14	NA	119162785	119113669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119150524_119150623_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.25	chr14	-	4368	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	11.2165020106703	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	-6	True	AGTAAA	-14	NA	119162880	119113669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160589_119161308_119161508_119161836_119161931_119162552
ES.11383.26	chr14	-	4343	22	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	54	0	intron_retention	FALSE	canonical	3	9	junction_19	10.1869152656918	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	-6	True	AGTAAA	-14	NA	119162745	119113669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.27	chr14	-	3905	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	10.2647493571484	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGACTGTGGCTGCT	NA	False	NA	-7	True	AGTAAA	-13	NA	119162945	119113670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162871
ES.11383.28	chr14	-	4000	21	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1278330275792	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGACTGTGGCTGCT	NA	False	NA	-7	True	AGTAAA	-13	NA	119162774	119113670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116751_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.3	chr14	-	3765	24	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6245087480897	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTTTTTTTTGTTTG	NA	False	NA	NA	False	AATATA	-19	NA	119162777	119112929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119113122_119114405_119114675_119116016_119116127_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.31	chr14	-	5229	7	NIC	ENSMUSG00000042156.17	novel	4226	17	NA	NA	-745	-2	intron_retention	FALSE	canonical	3	37	junction_6	3.41565025531987	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTGCGACTGTGGCTG	NA	False	NA	-9	True	AGTAAA	-11	NA	119127820	119113672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667
ES.11383.32	chr14	-	3467	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	-83	695	-10	-573	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTAGTGTTAAATGTAT	NA	False	NA	NA	False	CATAAA	-23	NA	119162882	119114364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.35	chr14	-	3659	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-8	-575	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	11.4989219760624	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTAGTGTTAAATGT	NA	False	NA	NA	False	CATAAA	-21	NA	119162880	119114366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.36	chr14	-	5886	21	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	104	-575	intron_retention	FALSE	canonical	0	0	junction_4	10.6437775249204	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTAGTGTTAAATGT	NA	False	NA	NA	False	CATAAA	-21	NA	119162695	119114366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120965_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.37	chr14	-	3329	22	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	551	-577	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	9.94064014692275	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTCTAGTGTTAAAT	NA	False	NA	NA	False	CATAAA	-19	NA	119162248	119114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162052
ES.11383.38	chr14	-	3476	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	14	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.4379451413344	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTCTAGTGTTAAAT	NA	False	NA	NA	False	CATAAA	-19	NA	119162785	119114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116016_119116127_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.4	chr14	-	5076	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	868	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.1495736807614	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTGGTTTTTTTTGTTT	NA	False	NA	NA	False	AATATA	-18	NA	119161931	119112930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119126881_119127001_119129181_119129245_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152128_119152372_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836
ES.11383.41	chr14	-	6287	22	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	-13	-578	intron_retention	FALSE	canonical	3	9	junction_19	10.2255737382625	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACTCTCTAGTGTTAAA	NA	False	NA	NA	False	CATAAA	-18	NA	119162885	119114369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11383.42	chr14	-	3541	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	533	-579	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	13.2481871518301	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTCTCTAGTGTTAA	NA	False	NA	NA	False	CATAAA	-17	NA	119162266	119114370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146981_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162052
ES.11383.43	chr14	-	4965	4	NIC	ENSMUSG00000042156.17	novel	729	4	NA	NA	868	4674	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	10.8423039781937	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCGATCCTAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	119161931	119155789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119160204_119160322_119160580_119161308_119161508_119161836
ES.11383.44	chr14	-	2486	2	NNC	ENSMUSG00000042156.17	novel	729	4	NA	NA	538	990	intron_retention	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGACTTATGGAGTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	119162261	119159473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119161931_119162232
ES.11383.5	chr14	-	3506	23	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.205431222946	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTAATTGGTTTTTTTT	NA	False	NA	NA	False	AATATA	-14	NA	119162775	119112934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119113122_119114405_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.6	chr14	-	4165	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	-81	-5	-8	5	multi-exon	FALSE	canonical	3	20	junction_20	6.55588223176215	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGTGGCTGCTTATTAA	NA	False	NA	-1	True	AGTAAA	-19	NA	119162880	119113664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ES.11383.8	chr14	-	4331	24	NNC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	115	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4431697971544	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGTGGCTGCTTATTAA	NA	False	NA	-1	True	AGTAAA	-19	NA	119162684	119113664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119114675_119116758_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119150524_119150691_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
ES.11384.1	chr14	+	5126	13	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-10887	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.5717366086496	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTATTCATGTT	8127	False	NA	21	True	AATAAA	-23	NA	119164500	119219115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119164549_119171567_119171694_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.10	chr14	+	5155	13	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-46	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.2535249725563	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGCTTCTTATTCATG	2283	False	NA	19	True	AATAAA	-21	NA	119175341	119219113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119175583_119190520_119190632_119195279_119195319_119195354_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.11	chr14	+	1461	11	ISM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-46	4894	-46	-4894	5prime_fragment	FALSE	canonical	3	143	junction_10	14.129401968944	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGAAAAAGTTCATTGA	2283	False	NA	NA	False	AAGAAA	-9	NA	119175341	119214215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121
ES.11384.12	chr14	+	3145	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-43	2039	-43	-2039	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTCAGCTTTCATTTT	2286	False	NA	NA	False	AAAACA	-21	NA	119175344	119217070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.13	chr14	+	4757	13	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-32	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	49.2535249725562	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTCTTAAGTTTATA	2297	False	NA	NA	False	NA	NA	NA	119175355	119218915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438_119216690_119216911
ES.11384.15	chr14	+	5022	12	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.0726269457573	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTACTTGCTTCTTAT	2331	False	NA	14	True	AATAAA	-16	NA	119175389	119219108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210215_119212648_119212677_119214121_119214271_119215438
ES.11384.19	chr14	+	4839	10	ISM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	19891	-3	19891	3	3prime_fragment	FALSE	canonical	3	143	junction_8	14.6295827472291	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTGCTTCTTATTCAT	NA	False	NA	18	True	AATAAA	-20	NA	119195278	119219112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.2	chr14	+	5119	12	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-3865	2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	47.5606615694696	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACTTGCTTCTTATTCA	1561	False	NA	17	True	AATAAA	-19	NA	119171522	119219111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119171694_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.3	chr14	+	3241	12	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-3815	-1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8577663360692	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTAGTAATCTTATGT	1611	False	NA	4	True	AATAAA	-23	NA	119171572	119217303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119171674_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.4	chr14	+	3260	12	NNC	ENSMUSG00000022136.9	novel	5141	12	NA	NA	-3815	-1807	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	47.5606615694696	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTTAGTAATCTTATG	1611	False	NA	3	True	AATAAA	-22	NA	119171572	119217302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_119171694_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.5	chr14	+	5254	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-106	-7	-106	7	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTATTCATGTTT	2223	False	NA	22	True	AATAAA	-24	NA	119175281	119219116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.6	chr14	+	5114	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-72	99	-72	-99	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGGGCTTACATGTG	2257	False	NA	-84	True	AATAAA	-19	NA	119175315	119219010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.7	chr14	+	1771	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-68	3438	-68	-3438	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAAATGGAACAAATC	2261	False	NA	79	True	ATTAAA	-27	NA	119175319	119215671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11384.9	chr14	+	3395	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	-53	1799	-53	-1799	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATCTTATGTTAACTAC	2276	False	NA	11	True	AATAAA	-30	NA	119175334	119217310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ES.11385.1	chr14	-	1017	3	NNC	ENSMUSG00000115220.2	novel	673	2	NA	NA	290	937	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTATTTTGTTTTTCCTTC	NA	False	NA	NA	False	TATAAA	-17	NA	119220882	119219468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_119219699_119220043_119220121_119220172
ES.11386.1	chr14	-	7681	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	7	-1232	7	1232	multi-exon	TRUE	canonical	0	0	junction_5	1.51355829942615	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTTGACAAAAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	119336835	119221218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ES.11386.2	chr14	-	5802	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	25	629	25	525	multi-exon	FALSE	canonical	0	0	junction_5	1.51355829942615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTCACTCAGGATTT	NA	False	NA	NA	False	NA	NA	NA	119336817	119223079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ES.11386.3	chr14	-	5302	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	0	1154	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.51355829942615	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATACTCTATATTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	119336842	119223604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ES.11386.5	chr14	-	4502	35	ISM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	10117	1381	10117	-2	3prime_fragment	FALSE	canonical	0	0	junction_5	1.51349180356101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATTTATCTTAAGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	119326725	119223831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576
ES.11386.6	chr14	-	5796	38	NIC	ENSMUSG00000042104.19	novel	6456	39	NA	NA	-2	-18	intron_retention	FALSE	canonical	0	0	junction_5	1.49114748369013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCATATTGCACTGTAA	NA	False	NA	NA	False	ATTAAA	-3	NA	119336844	119223847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ES.11386.7	chr14	-	5112	38	ISM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	25	9351	25	3725	5prime_fragment	FALSE	canonical	0	0	junction_4	1.52744552983187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACTGAATTTTCCAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	119336817	119231801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ES.11387.1	chr14	-	2541	1	Intergenic	novelGene_9483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATTATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	119409889	119407348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_119407300_119409900
ES.11388.1	chr14	-	162	1	Intergenic	novelGene_9484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAAAAAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	119540250	119540088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_119540100_119540200
ES.11389.1	chr14	-	2159	1	Intergenic	novelGene_9485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTAGACACGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	119543621	119541462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_119541500_119543600
ES.1139.1	chr1	+	1706	7	FSM	ENSMUSG00000026315.14	ENSMUST00000112706.4	4581	7	1	2874	1	285	multi-exon	FALSE	canonical	0	0	junction_5	1.34370962471642	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCCAAGGTGATTTC	6207	False	NA	NA	False	ATTAAA	-14	NA	107517736	107535340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_107518018_107525184_107525368_107526629_107526768_107530529_107530648_107532333_107532477_107533513_107533667_107534650
ES.11390.1	chr14	-	2799	1	Intergenic	novelGene_9486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGAGTAGACCTAGCAGC	NA	False	NA	NA	False	NA	NA	NA	119581962	119579163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_119579200_119582000
ES.11391.1	chr14	+	2330	1	Intergenic	novelGene_9487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATTTAAGATTGG	8160	False	NA	NA	False	NA	NA	NA	119652215	119654545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_119652200_119654500
ES.11392.1	chr14	+	4565	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	-11	-2	-11	2	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGCGGTCTTCCTTCT	6818	False	NA	9	True	AATAAA	-19	NA	120513069	120669111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.10	chr14	+	2174	9	NNC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	14	2331	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	11.7360289280489	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGTGAGTGCTTGGC	6843	False	NA	NA	False	AATAAA	-15	NA	120513094	120644409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120644010
ES.11392.11	chr14	+	3913	8	NIC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.9812779121496	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6843	False	NA	1	True	AATAAA	-11	NA	120513094	120669103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_120513318_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.12	chr14	+	4534	9	NNC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.8597153000874	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6869	False	NA	1	True	AATAAA	-11	NA	120513120	120669103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120513318_120562205_120562825_120616561_120616727_120622758_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642065_120642145_120666346
ES.11392.13	chr14	+	4439	9	NNC	ENSMUSG00000022139.18	novel	4534	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.1047462775897	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTGTTGCGGTCTTCC	6869	False	NA	5	True	AATAAA	-15	NA	120513120	120669107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626518_120633136_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.14	chr14	+	4406	9	FSM	ENSMUSG00000022139.18	ENSMUST00000227594.2	2334	9	0	-2072	0	1	multi-exon	FALSE	canonical	1	1	junction_1	11.1292126855407	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTGCGGTCTTCCTTC	NA	False	NA	8	True	AATAAA	-18	NA	120543863	120669110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120543954_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.15	chr14	+	4435	10	NIC	ENSMUSG00000022139.18	novel	2334	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	16.1451747177498	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTTGCGGTCTTCCT	NA	False	NA	6	True	AATAAA	-16	NA	120543868	120669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_120543954_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120642049_120642145_120666346
ES.11392.16	chr14	+	2320	2	NNC	ENSMUSG00000022139.18	novel	5561	5	NA	NA	18822	9783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTCCCTCGGTTTAC	NA	False	NA	NA	False	NA	NA	NA	120562689	120575601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120562825_120573416
ES.11392.2	chr14	+	4455	8	NIC	ENSMUSG00000022139.18	novel	4552	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	13.4952750612795	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTGTTGCGGTCTTCC	6829	False	NA	5	True	AATAAA	-15	NA	120513080	120669107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120666346
ES.11392.3	chr14	+	4854	2	FSM	ENSMUSG00000022139.18	ENSMUST00000227508.2	3789	2	-59	-1006	2	1006	multi-exon	FALSE	canonical	3	49	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAAAACAATTATAA	6831	False	NA	NA	False	NA	NA	NA	120513082	120566824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120513318_120562205
ES.11392.4	chr14	+	4636	10	NNC	ENSMUSG00000022139.18	novel	4534	10	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.8804418757713	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6832	False	NA	1	True	AATAAA	-11	NA	120513083	120669103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120513318_120523898_120523992_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.5	chr14	+	3693	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	3	856	3	143	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGCCTAAAACACTCAT	6832	False	NA	NA	False	NA	NA	NA	120513083	120668253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ES.11392.6	chr14	+	3928	5	NIC	ENSMUSG00000022139.18	novel	4534	10	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	21.2529409729571	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6833	False	NA	1	True	AATAAA	-11	NA	120513084	120669103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_120513318_120562205_120562825_120616561_120616727_120633862_120634017_120666346
ES.11392.7	chr14	+	1483	4	ISM	ENSMUSG00000022139.18	ENSMUST00000227484.2	5561	5	-33	7419	5	6597	5prime_fragment	FALSE	canonical	3	31	junction_3	7.58653778449403	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGTGGCCTGTGTTTGT	6834	False	NA	NA	False	AATAAA	-13	NA	120513085	120623269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802
ES.11392.9	chr14	+	4484	8	FSM	ENSMUSG00000022139.18	ENSMUST00000227012.2	2390	8	-29	-2065	8	-4	multi-exon	FALSE	canonical	0	0	junction_5	13.9430327857789	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATTGTGTTGCGGTC	6837	False	NA	1	True	AATAAA	-11	NA	120513088	120669103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120642049_120642145_120666346
ES.11393.1	chr14	-	1746	1	Intergenic	novelGene_9488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGATCTTTTTGC	NA	False	NA	NA	False	AATAAA	-6	NA	120710537	120708791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_120708800_120710500
ES.11394.1	chr14	+	4749	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	-558	0	-558	0	multi-exon	FALSE	canonical	3	102	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGTTTGTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	120715297	120744606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120716453_120741012
ES.11394.2	chr14	+	1783	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	-546	2954	-546	-2954	multi-exon	FALSE	canonical	3	102	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTACTGAAGTCAGGAA	NA	False	NA	7	True	AATAAA	-20	NA	120715309	120741652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_120716453_120741012
ES.11394.3	chr14	+	1849	1	Genic_Genomic	ENSMUSG00000051615.15	novel	NA	NA	NA	NA	-535	-27437	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-26	NA	120715320	120717169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_120715300_120717200
ES.11394.4	chr14	+	4314	3	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-78	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATCTGGCTTGTGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	120715777	120744600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120716453_120720984_120721036_120741012
ES.11394.5	chr14	+	2469	3	NNC	ENSMUSG00000051615.15	novel	4191	2	NA	NA	-60	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGCTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	120715795	120744602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_120716453_120741012_120741527_120743304
ES.11394.6	chr14	+	590	1	Intergenic	novelGene_9489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGTGGTAGCGCACG	NA	False	NA	NA	False	AAAACA	-11	NA	120722105	120722695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_120722100_120722700
ES.11394.7	chr14	+	4142	2	Genic_Genomic	ENSMUSG00000051615.15	novel	4191	2	NA	NA	24152	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGCTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	120740007	120744602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_+_120740072_120740524
ES.11395.1	chr14	+	172	1	Intergenic	novelGene_9490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCTAAGTGAGTGGGATT	NA	False	NA	NA	False	NA	NA	NA	120747385	120747557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_120747400_120747600
ES.11396.1	chr14	-	2970	5	Intergenic	novelGene_9491	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	5.80409338312195	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCTGCAAATATTATG	NA	False	NA	NA	False	NA	NA	NA	121035410	121006041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121008256_121011802_121011957_121027263_121027675_121029923_121030020_121035315
ES.11396.3	chr14	-	3230	5	Antisense	novelGene_ENSMUSG00000119265.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_4	5.59016994374947	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATTTTCCTGCAAATA	NA	False	NA	NA	False	NA	NA	NA	121042000	121006046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_121007962_121008149_121008256_121011802_121011957_121027263_121027672_121041353
ES.11396.4	chr14	-	2703	4	Intergenic	novelGene_9492	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.84754619472471	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATTTTCCTGCAAATA	NA	False	NA	NA	False	NA	NA	NA	121027518	121006046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121008256_121008962_121009048_121011802_121011957_121027263
ES.11396.5	chr14	-	2791	6	Intergenic	novelGene_9493	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	5.23832034148352	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATATTTTCCTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	121035428	121006047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121007962_121008149_121008256_121011802_121011957_121027263_121027672_121029923_121030020_121035315
ES.11396.6	chr14	-	2817	6	Antisense	novelGene_ENSMUSG00000119265.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	5.35163526410386	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATATTTTCCTGCAAA	NA	False	NA	NA	False	NA	NA	NA	121041490	121006048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_121007962_121008149_121008256_121011802_121011957_121027263_121027675_121029923_121030020_121041353
ES.11396.7	chr14	-	287	1	Intergenic	novelGene_9494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAGTAGAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	121010575	121010288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121010300_121010600
ES.11396.8	chr14	-	4468	1	Intergenic	novelGene_9495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGCAGCGTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	121035434	121030966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121031000_121035400
ES.11397.1	chr14	-	178	1	Intergenic	novelGene_9496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	121054753	121054575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121054600_121054800
ES.11398.1	chr14	+	176	1	Intergenic	novelGene_9497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGGGGGA	NA	False	NA	NA	False	NA	NA	NA	121057280	121057456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121057300_121057500
ES.11399.1	chr14	+	178	1	Intergenic	novelGene_9498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121075876	121076054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121075900_121076100
ES.114.1	chr1	+	497	3	NNC	ENSMUSG00000099498.2	novel	288	4	NA	NA	9610	15837	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAAGCCTGCCTCCAT	NA	False	NA	NA	False	AATAAA	-33	NA	13148671	13164723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_13148745_13148829_13148887_13164356
ES.114.2	chr1	+	468	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	13151468	13151936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13151500_13151900
ES.114.3	chr1	+	467	2	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTGTGTGTGAAGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	13159973	13164709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13160088_13164356
ES.114.4	chr1	+	169	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTTTTTTGTTTT	NA	False	NA	11	True	NA	NA	NA	13160436	13160605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13160400_13160600
ES.1140.1	chr1	-	5111	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTGTTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	108341748	108336637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_108336600_108341700
ES.11400.1	chr14	+	172	1	Intergenic	novelGene_9499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAAAACAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	121083058	121083230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121083100_121083200
ES.11401.1	chr14	+	3660	29	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-15442	-550	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	371.208004564909	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTTTTGTTTTTGA	NA	False	NA	12	True	AATAAA	-21	NA	121133193	121184280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121133308_121134645_121134726_121145379_121145485_121148661_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.103	chr14	+	3462	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	1	-553	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	326.203518078976	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	1841	False	NA	9	True	AATAAA	-18	NA	121148645	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121153493_121153582_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.104	chr14	+	3928	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	252.701512460848	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTCAGTACTGTCTG	1842	False	NA	26	True	AATAAA	-28	NA	121148646	121184838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180066_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.107	chr14	+	3827	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	256.124357295436	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCTGTGTAGAACTT	1844	False	NA	14	True	AATAAA	-16	NA	121148648	121184826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166727_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.108	chr14	+	4422	25	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	13	583	4	-2	intron_retention	FALSE	canonical	3	890	junction_17	107.834484473505	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1844	False	NA	16	True	AATAAA	-18	NA	121148648	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488
ES.11401.11	chr14	+	4081	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-125	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.483449758459	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1706	False	NA	16	True	AATAAA	-18	NA	121148510	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160430_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.111	chr14	+	3905	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.145721026138	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1846	False	NA	13	True	AATAAA	-15	NA	121148650	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154779_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.114	chr14	+	4403	25	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	334.282056137561	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1857	False	NA	16	True	ATTAAA	-17	NA	121148661	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166720_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.115	chr14	+	7345	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	17	-2	intron_retention	FALSE	canonical	3	890	junction_16	127.476114320379	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1857	False	NA	16	True	AATAAA	-18	NA	121148661	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.116	chr14	+	3461	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	17	-552	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	327.299785224928	1454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	1857	False	NA	10	True	AATAAA	-19	NA	121148661	121184278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121172943_121173046_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.117	chr14	+	4462	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	39	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	255.534432904844	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGATTTGCATTACT	1879	False	NA	10	True	ATTAAA	-11	NA	121148683	121185405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180188_121181097_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.118	chr14	+	5679	26	NNC	ENSMUSG00000030662.11	novel	4140	26	NA	NA	-1545	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	330.261607820225	1467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	4909	False	NA	13	True	AATAAA	-15	NA	121151713	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121153582_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176968_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.12	chr14	+	3223	19	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-123	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	298.461962752168	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1708	False	NA	16	True	AATAAA	-18	NA	121148512	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159572_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.120	chr14	+	5593	26	FSM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	-875	-578	-875	-3	multi-exon	FALSE	canonical	3	7	junction_1	254.949231024532	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	5579	False	NA	13	True	ATTAAA	-14	NA	121152383	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121153582_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.121	chr14	+	3815	25	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	1508	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	261.309997762343	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	7962	False	NA	13	True	AATAAA	-15	NA	121154766	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170555_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.122	chr14	+	3734	24	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	4074	4	4074	-4	3prime_fragment	FALSE	canonical	3	890	junction_15	128.999904749309	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCTGTGTAGAACTT	NA	False	NA	14	True	AATAAA	-16	NA	121157332	121184826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.123	chr14	+	4354	24	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	4074	-616	4074	35	3prime_fragment	FALSE	canonical	3	890	junction_15	128.999904749309	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATTGAAAATGAAATGG	NA	False	NA	51	True	ATTAAA	-14	NA	121157332	121185446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.124	chr14	+	2993	23	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	6276	553	6276	-553	3prime_fragment	FALSE	canonical	3	890	junction_14	130.847302337211	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	NA	False	NA	9	True	AATAAA	-18	NA	121159534	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.125	chr14	+	4162	23	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	6276	-616	6276	35	3prime_fragment	FALSE	canonical	3	890	junction_14	130.847302337211	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATTGAAAATGAAATGG	NA	False	NA	51	True	ATTAAA	-14	NA	121159534	121185446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.127	chr14	+	8760	14	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	12611	0	intron_retention	FALSE	canonical	3	890	junction_7	152.356052928347	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	NA	False	NA	16	True	ATTAAA	-17	NA	121165869	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121165958_121166712_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.128	chr14	+	7129	16	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	12611	40	intron_retention	FALSE	canonical	0	0	junction_7	319.553827842648	1470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGAAATGGATTTT	NA	False	NA	56	True	ATTAAA	-19	NA	121165869	121185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121165958_121166712_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176306_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.129	chr14	+	3487	17	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	13451	-578	13451	-3	3prime_fragment	FALSE	canonical	3	890	junction_8	145.347858601357	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	NA	False	NA	13	True	ATTAAA	-14	NA	121166709	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.131	chr14	+	5368	16	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	15005	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	323.832851260578	1470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	NA	False	NA	13	True	ATTAAA	-14	NA	121168263	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176968_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.132	chr14	+	3192	15	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	16681	-7	intron_retention	FALSE	canonical	0	0	junction_1	335.948375832493	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGGCCTGTGTAGAA	NA	False	NA	11	True	AATAAA	-13	NA	121169939	121184823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121170555_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.133	chr14	+	2033	14	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	17381	553	17381	-553	3prime_fragment	FALSE	canonical	3	890	junction_5	140.725381989514	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	NA	False	NA	9	True	AATAAA	-18	NA	121170639	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.134	chr14	+	3164	14	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	17381	-578	17381	-3	3prime_fragment	FALSE	canonical	3	890	junction_5	140.725381989514	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	NA	False	NA	13	True	ATTAAA	-14	NA	121170639	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.135	chr14	+	3100	14	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	17705	-11	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	346.617245377231	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	NA	False	NA	7	True	AATAAA	-9	NA	121170963	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121171665_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.136	chr14	+	1856	13	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	19180	556	19180	-556	3prime_fragment	FALSE	canonical	3	890	junction_4	139.123945538582	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGTTTCTTTGTTTTGT	NA	False	NA	6	True	AATAAA	-15	NA	121172438	121184274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.139	chr14	+	2021	6	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	25822	37	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	508.513362656283	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTGAAAATGAAATGGAT	NA	False	NA	53	True	ATTAAA	-16	NA	121179080	121185448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121184130
ES.11401.140	chr14	+	2050	6	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	25981	-578	25981	-3	3prime_fragment	FALSE	canonical	3	1201	junction_2	101.704670492559	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	NA	False	NA	13	True	ATTAAA	-14	NA	121179239	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.141	chr14	+	1467	6	ISM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	25981	5	25981	-5	3prime_fragment	FALSE	canonical	3	1201	junction_2	101.704670492559	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	NA	False	NA	13	True	AATAAA	-15	NA	121179239	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.16	chr14	+	3420	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-115	-551	combination_of_known_splicesites	FALSE	canonical	1	39	junction_1	253.201336226069	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTTGTTTTGTTTTTG	1716	False	NA	11	True	AATAAA	-20	NA	121148520	121184279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.2	chr14	+	4773	29	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-14352	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.403021099227	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTATTCAGATGGCT	NA	False	NA	68	True	ATTAAA	-31	NA	121134283	121185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121134324_121134645_121134726_121145375_121145485_121148661_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.23	chr14	+	3961	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-107	-2	combination_of_known_splicesites	FALSE	canonical	1	39	junction_1	253.201336226069	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1724	False	NA	16	True	AATAAA	-18	NA	121148528	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.24	chr14	+	3435	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-102	-574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	254.840329618371	1454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGTTTACCCTTTTGTT	1729	False	NA	-12	True	NA	NA	NA	121148533	121184256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183518_121183631_121184130
ES.11401.25	chr14	+	5474	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-101	-855	-101	855	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGACTCTGTAATGTGAA	1730	False	NA	NA	False	AATAAA	-17	NA	121148534	121186266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.27	chr14	+	3898	25	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-101	-5	at_least_one_novel_splicesite	FALSE	canonical	1	39	junction_1	322.443492034737	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1730	False	NA	13	True	AATAAA	-15	NA	121148534	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
ES.11401.3	chr14	+	4136	29	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-14330	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.403021099227	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTCTGTCGTTGATTC	NA	False	NA	36	True	AATAAA	-38	NA	121134305	121184848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121134324_121134645_121134726_121145375_121145485_121148661_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.30	chr14	+	4597	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-93	40	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_24	242.151014038761	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGAAATGGATTTT	1738	False	NA	56	True	ATTAAA	-19	NA	121148542	121185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
ES.11401.32	chr14	+	4522	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-89	40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	259.443903163842	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGAAATGGATTTT	1742	False	NA	56	True	ATTAAA	-19	NA	121148546	121185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.33	chr14	+	4112	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-84	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	327.299785224928	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	1747	False	NA	7	True	AATAAA	-9	NA	121148551	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121172943_121173046_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.34	chr14	+	4731	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-82	-553	intron_retention	FALSE	canonical	3	890	junction_17	126.137463595168	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	1749	False	NA	9	True	AATAAA	-18	NA	121148553	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.36	chr14	+	4519	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	1	39	junction_1	253.201336226069	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1749	False	NA	16	True	ATTAAA	-17	NA	121148553	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.37	chr14	+	3960	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-82	-5	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_24	242.151014038761	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1749	False	NA	13	True	AATAAA	-15	NA	121148553	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
ES.11401.38	chr14	+	3950	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-82	-11	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_13	248.785369344743	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	1749	False	NA	7	True	AATAAA	-9	NA	121148553	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172498_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.41	chr14	+	4081	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-73	-11	intron_retention	FALSE	canonical	3	890	junction_16	123.037906308946	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	1758	False	NA	7	True	AATAAA	-9	NA	121148562	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.42	chr14	+	3980	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-67	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	388.104212808879	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1764	False	NA	16	True	AATAAA	-18	NA	121148568	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160539_121160897_121160998_121163612_121163736_121163824_121163946_121165877_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178232_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.45	chr14	+	4700	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-54	40	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	326.203518078976	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGAAATGGATTTT	1777	False	NA	56	True	ATTAAA	-19	NA	121148581	121185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121153493_121153582_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.46	chr14	+	5495	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-54	-11	intron_retention	FALSE	canonical	3	890	junction_17	127.900942301715	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	1777	False	NA	7	True	AATAAA	-9	NA	121148581	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121183631_121184130
ES.11401.49	chr14	+	3980	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-54	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.145721026138	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1777	False	NA	13	True	AATAAA	-15	NA	121148581	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148750_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.5	chr14	+	4039	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-711	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	251.505361266042	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1120	False	NA	16	True	AATAAA	-18	NA	121147924	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148055_121148661_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.50	chr14	+	5645	27	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-47	978	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	327.299785224928	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAGTTTGGTAGACAT	1784	False	NA	NA	False	AATAAA	-13	NA	121148588	121186389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121172943_121173046_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.51	chr14	+	4507	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_13	248.785369344743	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1784	False	NA	16	True	ATTAAA	-17	NA	121148588	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172498_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.52	chr14	+	3939	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-46	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	256.482432926702	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAAGAGGCCTGTGT	1785	False	NA	7	True	AATAAA	-9	NA	121148589	121184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163857_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.54	chr14	+	4059	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-46	-2	intron_retention	FALSE	canonical	3	890	junction_16	129.38162221377	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1785	False	NA	16	True	AATAAA	-18	NA	121148589	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.55	chr14	+	3969	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-45	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	255.02078346676	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGGCCTGTGTAGAA	1786	False	NA	11	True	AATAAA	-13	NA	121148590	121184823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181306_121181744_121181974_121183488_121183631_121184130
ES.11401.57	chr14	+	3962	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-40	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	256.483449758459	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1791	False	NA	13	True	AATAAA	-15	NA	121148595	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160461_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.6	chr14	+	4143	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-189	564	-189	17	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGTCTGTCGTTGATT	1642	False	NA	35	True	AATAAA	-37	NA	121148446	121184847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.63	chr14	+	3956	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-34	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	256.444102291318	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGGCCTGTGTAGAA	1797	False	NA	11	True	AATAAA	-13	NA	121148601	121184823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166720_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.64	chr14	+	2582	19	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-33	-553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	298.461962752168	1454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	1798	False	NA	9	True	AATAAA	-18	NA	121148602	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159572_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.66	chr14	+	3359	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-29	-553	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_24	242.151014038761	1454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTTTGTTTTGTTTT	1802	False	NA	9	True	AATAAA	-18	NA	121148606	121184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
ES.11401.7	chr14	+	4725	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-160	-47	-160	47	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGGATTTTATTCAGA	1671	False	NA	63	True	ATTAAA	-26	NA	121148475	121185458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.71	chr14	+	4477	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	322.801447332567	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	1806	False	NA	13	True	ATTAAA	-14	NA	121148610	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173842_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
ES.11401.72	chr14	+	3948	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	331.045364867113	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGCCTGTGTAGAACT	1809	False	NA	13	True	AATAAA	-15	NA	121148613	121184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163728_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176971_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.73	chr14	+	4516	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	329.598752424823	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATTTGCATTACTTC	1809	False	NA	12	True	ATTAAA	-13	NA	121148613	121185407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176968_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180165_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.74	chr14	+	4619	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	890	junction_16	123.037906308946	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	1809	False	NA	13	True	ATTAAA	-14	NA	121148613	121185408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.77	chr14	+	3185	20	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	446.677212152082	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1834	False	NA	16	True	AATAAA	-18	NA	121148638	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121153493_121153582_121154767_121154849_121157334_121157528_121159537_121159572_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.79	chr14	+	3783	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	243.957091309107	1468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1834	False	NA	16	True	AATAAA	-18	NA	121148638	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184279
ES.11401.8	chr14	+	3543	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	-155	1130	-155	-549	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTTTGTTTTTGAG	1676	False	NA	13	True	AATAAA	-22	NA	121148480	121184281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.81	chr14	+	3393	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	3	-554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	256.201483211944	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTTCTTTGTTTTGTTT	1834	False	NA	8	True	AATAAA	-17	NA	121148638	121184276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160562_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.82	chr14	+	4593	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	3	0	intron_retention	FALSE	canonical	3	890	junction_16	129.38162221377	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1834	False	NA	16	True	ATTAAA	-17	NA	121148638	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.83	chr14	+	4413	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	5	100	-4	-100	multi-exon	FALSE	canonical	3	890	junction_17	126.92017018583	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTAACGTTTTCATAGT	1836	False	NA	-84	True	AATAGA	-17	NA	121148640	121185311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.88	chr14	+	4402	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	261.687419559205	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATTTGCATTACTTC	1840	False	NA	12	True	ATTAAA	-13	NA	121148644	121185407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121154767_121154849_121157334_121157528_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.9	chr14	+	3869	19	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	-146	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	298.461962752168	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGAAATGGATTTT	1685	False	NA	56	True	ATTAAA	-19	NA	121148489	121185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159572_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.92	chr14	+	3748	24	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	340.65815316192	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGTGTAGAACTTCA	1840	False	NA	16	True	AATAAA	-18	NA	121148644	121184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.96	chr14	+	3672	18	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	399.539665911506	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1840	False	NA	16	True	ATTAAA	-17	NA	121148644	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157561_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176968_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11401.98	chr14	+	4448	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	255.950482711012	1472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1840	False	NA	16	True	ATTAAA	-17	NA	121148644	121185411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179104_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ES.11402.1	chr14	-	2975	24	Antisense	novelGene_ENSMUSG00000030662.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGGAGCTGTGAGGCG	NA	False	NA	NA	False	NA	NA	NA	121181857	121148644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_121148754_121154765_121154847_121157332_121157525_121159534_121159640_121160450_121160548_121160891_121160996_121163610_121163734_121163822_121163946_121165869_121165955_121166709_121166820_121170253_121170381_121170462_121170551_121170639_121170814_121172438_121172660_121173833_121173911_121175969_121176110_121176184_121176308_121176869_121176969_121178233_121178405_121179041_121179154_121179239_121179296_121180058_121180184_121181091_121181311_121181743
ES.11403.1	chr14	-	176	1	Intergenic	novelGene_9500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAGCAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	121183365	121183189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121183200_121183400
ES.11404.1	chr14	-	175	1	Intergenic	novelGene_9501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	121195555	121195380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121195400_121195600
ES.11405.1	chr14	+	158	1	Intergenic	novelGene_9502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	121219668	121219826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121219700_121219800
ES.11406.1	chr14	+	4731	27	NIC	ENSMUSG00000025555.15	novel	797	8	NA	NA	-67	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	30.9907649920569	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCTCTTTGTG	NA	False	NA	37	True	NA	NA	NA	121272544	121521158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121272751_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.10	chr14	+	4871	28	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-71	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4133904154533	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121272904	121521149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273048_121273125_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.11	chr14	+	4321	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-46	610	-46	-610	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGGGTCGTCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	121272929	121520546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.13	chr14	+	3938	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-18	-935	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCCAATCTTTCT	NA	False	NA	24	True	AGTAAA	-21	NA	121272957	121520221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.16	chr14	+	5842	26	NIC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	49	-20	intron_retention	FALSE	canonical	3	58	junction_13	26.1625686812285	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTCTGAGGCAAAACCA	NA	False	NA	15	True	AATAAA	-28	NA	121273024	121521136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.17	chr14	+	4803	28	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	201	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4012102575627	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCCAGCACATACAAGT	NA	False	NA	1	True	AATAAA	-14	NA	121273176	121521122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121316426_121316610_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.18	chr14	+	5340	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	204	-31	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	31.1790970792061	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGCACATACAAGTCTG	NA	False	NA	4	True	AATAAA	-17	NA	121273179	121521125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481711_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.19	chr14	+	5100	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	211	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.7234211495838	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTCTCTTTGT	NA	False	NA	36	True	NA	NA	NA	121273186	121521157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273793_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.2	chr14	+	4673	27	NNC	ENSMUSG00000025555.15	novel	797	8	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.5172112115461	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCTCTTTGTG	NA	False	NA	37	True	NA	NA	NA	121272572	121521158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121272751_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.20	chr14	+	4653	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	217	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.3385360502881	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121273192	121521149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479776_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.21	chr14	+	5803	13	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	217	35921	217	9164	5prime_fragment	FALSE	canonical	3	59	junction_1	12.4127510604575	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGGCCTGAAGAACCTA	NA	False	NA	NA	False	TTTAAA	-29	NA	121273192	121485235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764
ES.11406.23	chr14	+	4665	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	230	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	32.0107461616015	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTCTCTTTGT	NA	False	NA	36	True	NA	NA	NA	121273205	121521157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472468_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.25	chr14	+	3572	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	242	1071	242	-1071	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTCGTCCTGCAGCAT	NA	False	NA	NA	False	NA	NA	NA	121273217	121520085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.26	chr14	+	6430	1	Intergenic	novelGene_9504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGTAAAAGCAGTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	121282104	121288534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121282100_121288500
ES.11406.27	chr14	+	4109	2	Intergenic	novelGene_9505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAGATAAAGAATTTCG	NA	False	NA	NA	False	NA	NA	NA	121300189	121307515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121303759_121306975
ES.11406.28	chr14	+	4359	26	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	22588	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.1567916624939	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACCTGTGTCTTCTCT	NA	False	NA	32	True	AATAAA	-45	NA	121362078	121521153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121362142_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.29	chr14	+	157	1	Intergenic	novelGene_9506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAACCTT	NA	False	NA	NA	False	NA	NA	NA	121464145	121464302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121464100_121464300
ES.11406.3	chr14	+	5009	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-151	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCTCTTTGTGT	NA	False	NA	38	True	NA	NA	NA	121272824	121521159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.30	chr14	+	3067	1	Intergenic	novelGene_9507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGGTAATTCTAAG	NA	False	NA	NA	False	NA	NA	NA	121464783	121467850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121464800_121467800
ES.11406.31	chr14	+	3403	15	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	-10571	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	37.1928921232242	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGTGTCTTCTCTTT	NA	False	NA	34	True	NA	NA	NA	121481748	121521155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121482073_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.32	chr14	+	3488	13	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	-10522	-936	intron_retention	FALSE	canonical	0	0	junction_1	39.2520346252551	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCCAATCTTTC	NA	False	NA	23	True	AGTAAA	-20	NA	121481797	121520220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121482073_121492849_121493008_121494128_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.33	chr14	+	2528	1	Intergenic	novelGene_9508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTTTAACATTGGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	121482857	121485385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121482900_121485400
ES.11406.34	chr14	+	7598	14	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	214383	943	-4961	-943	3prime_fragment	FALSE	canonical	3	68	junction_3	24.085891669498	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTCATTTTTTTTTCCA	NA	False	NA	16	True	AGTAAA	-13	NA	121487358	121520213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.35	chr14	+	3705	1	ISM	ENSMUSG00000085133.3	ENSMUST00000130256.3	4715	2	1560	1	1560	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGGCCTTTTTCTCCG	NA	False	NA	NA	False	AATAAA	-19	NA	121487677	121491382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121487700_121491400
ES.11406.36	chr14	+	8058	14	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	214863	3	-4481	-3	3prime_fragment	FALSE	canonical	3	68	junction_3	24.085891669498	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACCTGTGTCTTCTCT	NA	False	NA	32	True	AATAAA	-45	NA	121487838	121521153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.37	chr14	+	5455	1	NIC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-3867	-11426	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCTTTTAACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	121488452	121493907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121488500_121493900
ES.11406.38	chr14	+	3501	15	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	-649	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5967459512449	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121491670	121521156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121492092_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.39	chr14	+	4258	13	NIC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-603	2	intron_retention	FALSE	canonical	3	68	junction_3	24.5338485000259	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCTCTTTGTG	NA	False	NA	37	True	NA	NA	NA	121491716	121521158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.4	chr14	+	4113	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-150	922	-150	-922	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTACTTTTATAATAG	NA	False	NA	37	True	AGTAAA	-34	NA	121272825	121520234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.40	chr14	+	3873	13	NIC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-207	-940	intron_retention	FALSE	canonical	3	68	junction_2	22.9140907643213	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTTTCCAATC	NA	False	NA	19	True	AGTAAA	-16	NA	121492112	121520216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121493008_121494128_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.41	chr14	+	3244	15	NNC	ENSMUSG00000025555.15	novel	961	4	NA	NA	-193	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5967459512449	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACCTGTGTCTTCTCT	NA	False	NA	32	True	AATAAA	-45	NA	121492126	121521153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121492294_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.42	chr14	+	2787	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	10296	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	35.1415085025488	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTCTCTTTGT	NA	False	NA	36	True	NA	NA	NA	121502615	121521157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121502734_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.43	chr14	+	1780	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	10366	-936	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	35.1415085025488	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCCAATCTTTC	NA	False	NA	23	True	AGTAAA	-20	NA	121502685	121520220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121502734_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.44	chr14	+	3001	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	10615	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.9000425216186	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGTGTCTTCTCTTT	NA	False	NA	34	True	NA	NA	NA	121502934	121521155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121503269_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.45	chr14	+	1896	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11436	-936	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCCAATCTTTC	NA	False	NA	23	True	AGTAAA	-20	NA	121503755	121520220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.46	chr14	+	2767	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	11494	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.2427536216917	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121503813	121521149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121503920_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.47	chr14	+	2921	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	12233	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0706272533751	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACCTGTGTCTTCTCT	NA	False	NA	32	True	AATAAA	-45	NA	121504552	121521153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121504809_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.48	chr14	+	1509	1	Intergenic	novelGene_9509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCCCTCCCCCTTCTTA	NA	False	NA	NA	False	AAAAAG	-41	NA	121510831	121512340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121510800_121512300
ES.11406.49	chr14	+	1430	1	NIC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	27400	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCACCTGTGTCTT	NA	False	NA	28	True	AATAAA	-41	NA	121519719	121521149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_121519700_121521100
ES.11406.5	chr14	+	5022	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	-137	0	-137	0	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121272838	121521156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.6	chr14	+	4963	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-137	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.1790970792061	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTCTCTTTGT	NA	False	NA	36	True	NA	NA	NA	121272838	121521157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121480991_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11406.9	chr14	+	4946	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	-92	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	30.8283326612802	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGTGTCTTCTCTTT	NA	False	NA	34	True	NA	NA	NA	121272883	121521155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121480991_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ES.11407.1	chr14	-	1220	1	Intergenic	novelGene_9503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	9729	False	NA	NA	False	NA	NA	NA	121278280	121277060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121277100_121278300
ES.11408.1	chr14	+	1405	1	Antisense	novelGene_ENSMUSG00000063410.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCCAAAGGAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	121524039	121525444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_121524000_121525400
ES.11409.1	chr14	+	7178	2	Antisense	novelGene_ENSMUSG00000063410.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCTCACTGGTAAAC	NA	False	NA	NA	False	NA	NA	NA	121562718	121571073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_121565200_121566376
ES.1141.1	chr1	+	190	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	108705929	108706119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_108705900_108706100
ES.11410.1	chr14	-	4824	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	9	-2157	9	2157	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCGTGTTGTGGGA	7312	False	NA	-7	True	AATAAA	-18	NA	121616737	121521597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.10	chr14	-	4611	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	285	2154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	118.646429388379	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGTCTCGTGTTGTG	7721	False	NA	-10	True	AATAAA	-15	NA	121616328	121521600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121610237_121610437_121616309
ES.11410.12	chr14	-	5431	10	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-35	2153	intron_retention	FALSE	canonical	3	248	junction_6	28.4722086720835	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGTCTCGTGTTGT	7401	False	NA	-11	True	AATAAA	-14	NA	121616648	121521601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121524777_121529391_121529529_121530832_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.13	chr14	-	4604	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	258	2153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.272622458202	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGTCTCGTGTTGT	7694	False	NA	-11	True	AATAAA	-14	NA	121616355	121521601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121599643_121599810_121616309
ES.11410.15	chr14	-	4538	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-8578	2152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.086325056245	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTGTCTCGTGTTG	NA	False	NA	-12	True	AATAAA	-13	NA	121605858	121521602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121592646_121592771_121605835
ES.11410.16	chr14	-	4477	11	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	29	2152	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	93.8301124373194	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTGTCTCGTGTTG	6655	False	NA	-12	True	AATAAA	-13	NA	121617394	121521602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121617308
ES.11410.17	chr14	-	4905	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-47	2152	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	117.710318189462	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTGTCTCGTGTTG	7389	False	NA	-12	True	AATAAA	-13	NA	121616660	121521602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121600708_121600872_121616309
ES.11410.18	chr14	-	4492	11	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-8566	2152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	94.39962923656	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTGTCTCGTGTTG	NA	False	NA	-12	True	AATAAA	-13	NA	121605846	121521602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121605745
ES.11410.19	chr14	-	4643	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	241	2149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	134.951904502773	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGCTGTGTCTCGTG	7677	False	NA	-15	True	AATAAA	-10	NA	121616372	121521605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531727_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121600680_121600872_121616309
ES.11410.2	chr14	-	9307	9	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	16	2156	intron_retention	FALSE	canonical	0	0	junction_2	103.623115181894	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTCGTGTTGTGGG	7319	False	NA	-8	True	AATAAA	-17	NA	121616730	121521598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121529529_121530832_121530902_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.20	chr14	-	4638	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	91	-2053	-42	2053	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGGCTTCTGTGTT	7394	False	NA	-111	True	NA	NA	NA	121616655	121521701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.21	chr14	-	4141	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	63	-1528	63	1528	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGCAAGCTGTATTCA	7366	False	NA	NA	False	AATAAA	-32	NA	121616683	121522226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.22	chr14	-	2674	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	6	-4	6	4	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCATACTATTCTTGA	7309	False	NA	-7	True	AATAAA	-16	NA	121616740	121523750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.23	chr14	-	2340	11	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	220	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.3380951166243	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGCATACTATTCTT	7656	False	NA	-9	True	AATAAA	-14	NA	121616393	121523752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531741_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.24	chr14	-	2785	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	118.646429388379	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTTTGCATACTATTC	7389	False	NA	-11	True	AATAAA	-12	NA	121616660	121523754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121600680_121600876_121616309
ES.11410.25	chr14	-	2708	12	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	117.710318189462	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATTTTGCATACTAT	7432	False	NA	-13	True	AATAAA	-10	NA	121616617	121523756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121600708_121600872_121616309
ES.11410.26	chr14	-	2222	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	51	403	51	-403	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGATTTGGATTTTAT	7354	False	NA	51	True	NA	NA	NA	121616695	121524157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.27	chr14	-	1885	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	85	706	-48	-706	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACACAAAAAACCCTGAAA	7388	False	NA	NA	False	AAGAAA	-9	NA	121616661	121524460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.28	chr14	-	8016	1	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	15592	1161	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGGTGATACTGCTTT	NA	False	NA	NA	False	AATAAA	-3	NA	121581688	121573672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121573700_121581700
ES.11410.4	chr14	-	4530	11	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-8344	2156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	94.39962923656	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTCGTGTTGTGGG	NA	False	NA	-8	True	AATAAA	-17	NA	121605624	121521598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121605489
ES.11410.6	chr14	-	4733	11	NNC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	-20	2155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.3380951166243	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTCTCGTGTTGTGG	7416	False	NA	-9	True	AATAAA	-16	NA	121616633	121521599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531741_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ES.11410.9	chr14	-	4624	10	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	16	2154	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	92.4062421065099	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGTCTCGTGTTGTG	7452	False	NA	-10	True	AATAAA	-15	NA	121616597	121521600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121574833_121575065_121616309
ES.11411.1	chr14	-	177	1	Intergenic	novelGene_9510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTAATGGTTTA	NA	False	NA	NA	False	NA	NA	NA	121634557	121634380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121634400_121634600
ES.11412.1	chr14	-	2644	1	Intergenic	novelGene_9511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121638041	121635397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121635400_121638000
ES.11413.1	chr14	+	309	1	Intergenic	novelGene_9513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTCAAAATT	NA	False	NA	NA	False	NA	NA	NA	121740705	121741014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121740700_121741000
ES.11414.1	chr14	-	3413	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-289	-3	-289	3	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTGTTTGTGTGTCTT	2849	False	NA	-3	True	AATAAA	-15	NA	121742953	121697029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ES.11414.10	chr14	-	169	1	Intergenic	novelGene_9512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	121724973	121724804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_121724800_121725000
ES.11414.4	chr14	-	3247	22	NIC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-32	0	intron_retention	FALSE	canonical	3	25	junction_3	5.76446224233542	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	3106	False	NA	-6	True	AATAAA	-12	NA	121742696	121697032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728723_121729085_121729103_121742630
ES.11414.5	chr14	-	2567	23	NNC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0157933136861	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	3102	False	NA	-6	True	AATAAA	-12	NA	121742700	121697032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121697635_121699917_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ES.11414.6	chr14	-	3375	23	NNC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	9.86353162910461	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	3046	False	NA	-6	True	AATAAA	-12	NA	121742756	121697032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729265_121742630
ES.11414.7	chr14	-	3296	22	NNC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	9.77664392518769	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	2960	False	NA	-6	True	AATAAA	-12	NA	121742842	121697032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121742616
ES.11414.8	chr14	-	3339	20	NIC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-4	-4642	intron_retention	FALSE	canonical	3	32	junction_7	4.96692662627538	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3134	False	NA	NA	False	NA	NA	NA	121742668	121701674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ES.11414.9	chr14	-	2201	21	NNC	ENSMUSG00000025557.11	novel	3121	23	NA	NA	-46	-4984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.492378186093	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTCTGACCAGAGTCCA	3092	False	NA	NA	False	NA	NA	NA	121742710	121702016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710420_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ES.11415.1	chr14	+	1119	1	Intergenic	novelGene_9514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAATTCCCTTAAGTA	2840	False	NA	NA	False	AATACA	-36	NA	121833832	121834951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121833800_121835000
ES.11416.1	chr14	+	8862	2	Antisense	novelGene_ENSMUSG00000025558.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCTCAAATATGTCAAATA	6662	False	NA	NA	False	NA	NA	NA	121837654	121848037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_121842702_121844222
ES.11417.1	chr14	+	4900	1	Intergenic	novelGene_9515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACCTAGAAATGGTACAA	6787	False	NA	NA	False	NA	NA	NA	121984625	121989525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121984600_121989500
ES.11417.2	chr14	+	165	1	Intergenic	novelGene_9516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGACTGTAAAATCC	NA	False	NA	NA	False	NA	NA	NA	121989033	121989198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_121989000_121989200
ES.11418.1	chr14	-	5554	40	NNC	ENSMUSG00000025558.20	novel	738	5	NA	NA	-29384	6840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.267002938937	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAAATTTTTATTTCA	7688	False	NA	NA	False	AGTAAA	-11	NA	121872040	121772617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121773522_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915
ES.11418.10	chr14	-	7670	53	NNC	ENSMUSG00000025558.20	novel	6996	56	NA	NA	89	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	13.7428168434604	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGACAGGGTACCTA	NA	False	NA	-6	True	AATAAA	-29	NA	122035160	121779531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121876952_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.13	chr14	-	7923	54	NNC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	-19	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.6461936675309	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGCCATCCTAAAAAA	NA	False	NA	-20	True	AATAAA	-15	NA	122035268	121779545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798114_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846189_121846232_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.15	chr14	-	7895	53	NIC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	-40	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_19	9.86634048450655	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGTTGTTTGGCCAT	NA	False	NA	-29	True	AATAAA	-6	NA	122035289	121779554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.16	chr14	-	7612	52	NIC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	151	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_31	12.4338464786452	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	NA	False	NA	-34	True	AATAAA	-1	NA	122035098	121779559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.18	chr14	-	7831	53	NIC	ENSMUSG00000025558.20	novel	6996	56	NA	NA	-50	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	11.1448737121231	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	NA	False	NA	-34	True	AATAAA	-1	NA	122035299	121779559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.19	chr14	-	7930	53	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_52	12.8038224691881	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	NA	False	NA	-34	True	AATAAA	-1	NA	122035287	121779559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034856
ES.11418.2	chr14	-	3686	25	NNC	ENSMUSG00000025558.20	novel	738	5	NA	NA	-4583	6574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.1023705828662	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGATTTGTTACTGTGTC	NA	False	NA	NA	False	NA	NA	NA	121847239	121772883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121773522_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173
ES.11418.20	chr14	-	6141	41	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-34241	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	13.9803209905925	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	2831	False	NA	-34	True	AATAAA	-1	NA	121876897	121779559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821206_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878
ES.11418.21	chr14	-	8171	56	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_53	17.999816344334	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTGTTGTTTG	NA	False	NA	-34	True	AATAAA	-1	NA	122035277	121779559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122024800_122024926_122025051_122025145_122034901
ES.11418.23	chr14	-	7874	53	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-39	-8	combination_of_known_splicesites	FALSE	canonical	1	5	junction_32	14.5410432180715	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACACTGAATGTTTGT	NA	False	NA	-40	True	ATTAAA	-24	NA	122035288	121779565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.26	chr14	-	7574	54	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	165	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6829790100029	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCTGGTAATAAACA	NA	False	NA	-52	True	ATTAAA	-37	NA	122035084	121779577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780504_121780593_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.27	chr14	-	7677	55	NNC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-24	-20	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.220161166995	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCTGGTAATAAACA	NA	False	NA	-52	True	ATTAAA	-37	NA	122035273	121779577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780334_121780482_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846189_121846232_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.28	chr14	-	7743	53	NIC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-41	-78	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	11.191448552804	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCCTGCTGTAATTA	NA	False	NA	2	True	AATAAA	-21	NA	122035290	121779635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.29	chr14	-	7809	53	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-38	-78	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	9.91970351126884	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCCCTGCTGTAATTA	NA	False	NA	2	True	AATAAA	-21	NA	122035287	121779635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.3	chr14	-	6882	54	NNC	ENSMUSG00000025558.20	novel	738	5	NA	NA	132	6572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.4532333442007	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGATTTGTTACTGTG	NA	False	NA	NA	False	NA	NA	NA	122035117	121772885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121773522_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.31	chr14	-	7894	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-44	-80	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5346085513012	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTGCCCTGCTGTAAT	NA	False	NA	0	True	AATAAA	-19	NA	122035293	121779637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.32	chr14	-	7756	55	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-21	-80	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.4523583063907	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTGCCCTGCTGTAAT	NA	False	NA	0	True	AATAAA	-19	NA	122035270	121779637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780504_121780549_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.33	chr14	-	4552	25	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-3221	-81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	18.8014109990595	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCACTGCCCTGCTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	121845877	121779638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121845672
ES.11418.34	chr14	-	7579	55	NNC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	151	-82	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.4819688032463	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCACTGCCCTGCTGTA	NA	False	NA	-2	True	AATAAA	-17	NA	122035098	121779639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780527_121780572_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.35	chr14	-	8104	56	NNC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-39	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6018216472216	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCACTGCCCTGCTGT	NA	False	NA	-3	True	AATAAA	-16	NA	122035288	121779640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780504_121780549_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_121975712_121976049_122034901
ES.11418.36	chr14	-	7493	52	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	150	-83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_40	12.8304532486256	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCACTGCCCTGCTGT	NA	False	NA	-3	True	AATAAA	-16	NA	122035099	121779640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.37	chr14	-	7568	54	NNC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	-38	-83	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	12.6437339636662	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCACTGCCCTGCTGT	NA	False	NA	-3	True	AATAAA	-16	NA	122035287	121779640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121780334_121780572_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.39	chr14	-	5221	46	NIC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	155	17876	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	11.508451001088	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCGGAGGGATTTCGA	NA	False	NA	NA	False	NA	NA	NA	122035094	121799487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.4	chr14	-	7904	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	132	9	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	12.5739676944609	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGTTATCGAAGCTG	NA	False	NA	77	True	AATAAA	-25	NA	122035117	121779448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.40	chr14	-	4069	5	ISM	ENSMUSG00000025558.20	ENSMUST00000211803.2	3667	18	4874	36297	-824	1541	internal_fragment	FALSE	canonical	3	50	junction_2	5.5	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTGACCCTCAGCACG	NA	False	NA	NA	False	NA	NA	NA	121824982	121815822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638
ES.11418.41	chr14	-	4448	35	NIC	ENSMUSG00000025558.20	novel	399	3	NA	NA	-38	-855	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.4473212881596	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTTTTTTTTCCACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	122035287	121835908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121836272_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.42	chr14	-	4199	34	NNC	ENSMUSG00000025558.20	novel	8107	55	NA	NA	-57	-3945	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.211009127509	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACCCATCCCTGTGA	NA	False	NA	NA	False	NA	NA	NA	122035306	121838998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121839228_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.43	chr14	-	5667	19	ISM	ENSMUSG00000025558.20	ENSMUST00000212181.2	7368	53	63789	59112	-29384	-3976	internal_fragment	FALSE	canonical	3	42	junction_17	9.9604154804511	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7688	False	NA	NA	False	NA	NA	NA	121872040	121839029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915
ES.11418.44	chr14	-	3064	23	ISM	ENSMUSG00000025558.20	ENSMUST00000100299.11	6476	53	-37	81478	-37	-27262	5prime_fragment	FALSE	canonical	3	42	junction_7	7.66566348688846	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTACTGCGTTTTTT	NA	False	NA	NA	False	AATACA	-19	NA	122035286	121862315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.5	chr14	-	7985	52	NNC	ENSMUSG00000025558.20	novel	7368	53	NA	NA	-22	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.611066889971	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGCAGTTATCGAAGC	NA	False	NA	75	True	AATAAA	-23	NA	122035271	121779450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_121781129_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.6	chr14	-	7851	52	NIC	ENSMUSG00000025558.20	novel	6996	56	NA	NA	-51	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	13.4547242260279	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGCAGTTATCGAAGC	NA	False	NA	75	True	AATAAA	-23	NA	122035300	121779450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11418.7	chr14	-	7949	54	NIC	ENSMUSG00000025558.20	novel	7803	54	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	13.5083271392276	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGGTACCTAGTGGTG	NA	False	NA	0	True	AATAAA	-35	NA	122035305	121779525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829292_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ES.11419.1	chr14	+	2210	10	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-8108	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.460249865532	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATACTTCTCC	778	False	NA	23	True	AATAAA	-23	NA	122107923	122258453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122108039_122111718_122111823_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.10	chr14	+	5552	11	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	0	-797	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.730596537121	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTTTTTACTGGGC	8886	False	NA	21	True	ATTAAA	-18	NA	122116031	122257649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122191605_122191834_122211020_122211145_122220679_122220728_122231636_122235816_122238255_122238305_122246202_122246326_122257361
ES.11419.11	chr14	+	1249	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	8	-792	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTACTGGGCATTTC	8936	False	NA	26	True	ATTAAA	-23	NA	122116081	122257654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
ES.11419.12	chr14	+	2444	11	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	185.452419773914	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCAGTAGTTTTTAT	8980	False	NA	15	True	AATAAA	-15	NA	122116125	122258445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122234882_122235114_122235646_122235816_122246202_122246326_122257361
ES.11419.13	chr14	+	1708	12	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	52	-798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	195.700775134974	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTTTTTACTGGG	8980	False	NA	20	True	ATTAAA	-17	NA	122116125	122257648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122188961_122189056_122191516_122191834_122192687_122192738_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.14	chr14	+	1997	10	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	131.034158208018	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCAGTAGTTTTTAT	8986	False	NA	15	True	AATAAA	-15	NA	122116131	122258445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231717_122231757_122231883_122246202_122246326_122257361
ES.11419.15	chr14	+	2056	9	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-17650	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.982406710346	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	NA	False	NA	16	True	AATAAA	-16	NA	122135964	122258446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122136037_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.16	chr14	+	1013	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	10	-798	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTTTTTACTGGG	2020	False	NA	20	True	ATTAAA	-17	NA	122183735	122257648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.17	chr14	+	925	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	56	-798	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTTTTTACTGGG	2066	False	NA	20	True	ATTAAA	-17	NA	122183781	122257648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.18	chr14	+	1782	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	60	63	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCCAGACAACGTCTTG	2070	False	NA	79	True	AATAAA	-30	NA	122183785	122258509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.19	chr14	+	1708	5	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	190.873485586658	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	2075	False	NA	16	True	AATAAA	-16	NA	122183790	122258446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122183921_122211020_122211145_122231636_122231883_122246202_122246326_122257361
ES.11419.2	chr14	+	1321	1	Intergenic	novelGene_9519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	3673	False	NA	NA	False	NA	NA	NA	122110818	122112139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122110800_122112100
ES.11419.20	chr14	+	1763	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	7	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATACTTCTCC	2075	False	NA	23	True	AATAAA	-23	NA	122183790	122258453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.21	chr14	+	1693	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	69	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.55073438524	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATACTTCTCC	2079	False	NA	23	True	AATAAA	-23	NA	122183794	122258453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231859_122246202_122246326_122257361
ES.11419.22	chr14	+	3906	1	Intergenic	novelGene_9522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCCCGTCTTCCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	122246366	122250272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122246400_122250300
ES.11419.23	chr14	+	5710	1	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	69011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	NA	False	NA	16	True	AATAAA	-16	NA	122252736	122258446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122252700_122258400
ES.11419.3	chr14	+	2218	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-72	-7	-72	7	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTTTATACTTCTCC	8814	False	NA	23	True	AATAAA	-23	NA	122115959	122258453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.4	chr14	+	2214	8	ISM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-60	11021	-60	1106	5prime_fragment	FALSE	canonical	3	342	junction_2	42.9679519870238	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCTTTAATATGTGAAA	8826	False	NA	NA	False	AATAAA	-15	NA	122115971	122247425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202
ES.11419.5	chr14	+	1417	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	-58	780	-58	-780	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTCTCAGTGTGGAGA	8828	False	NA	38	True	ATTAAA	-35	NA	122115973	122257666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ES.11419.7	chr14	+	2150	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-50	9	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTTATACTTCTCCAA	8836	False	NA	25	True	AATAAA	-25	NA	122115981	122258455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
ES.11419.8	chr14	+	2624	5	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-30	-57869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	156.999203819637	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAGTGACAAAAGG	8856	False	NA	NA	False	AATAAA	-20	NA	122116001	122173851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122171770
ES.11419.9	chr14	+	2680	8	NNC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	-9	-75701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	177.798785606835	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGCCCTGGGCTCGGGT	8877	False	NA	NA	False	NA	NA	NA	122116022	122156019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122153083_122153177_122153280_122153743_122154319_122154430_122154526
ES.1142.1	chr1	+	221	1	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCTTAAGATAATTGCAA	NA	False	NA	NA	False	CATAAA	-12	NA	109113455	109113676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_109113500_109113700
ES.11420.1	chr14	-	135	1	Intergenic	novelGene_9517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	122108967	122108832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122108800_122109000
ES.11421.1	chr14	-	171	1	Intergenic	novelGene_9518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAACACATCTCCCCCA	NA	False	NA	NA	False	NA	NA	NA	122110478	122110307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122110300_122110500
ES.11422.1	chr14	-	3297	1	Genic_Genomic	ENSMUSG00000050350.9	novel	NA	NA	NA	NA	-1467	-2699	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122154660	122151363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr14_-_122151400_122154700
ES.11423.1	chr14	-	157	1	Intergenic	novelGene_9520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	122217415	122217258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122217300_122217400
ES.11424.1	chr14	-	2904	1	Intergenic	novelGene_9521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122237767	122234863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122234900_122237800
ES.11425.1	chr14	-	176	1	Intergenic	novelGene_9523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122248993	122248817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122248800_122249000
ES.11426.1	chr14	+	933	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	-30	10	-30	-10	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGGAACCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	122272055	122275822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122272425_122275258
ES.11427.1	chr14	+	6340	6	Intergenic	novelGene_9524	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATAAAATAA	160	False	NA	NA	False	NA	NA	NA	122280933	122298020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122284553_122284739_122286596_122287404_122287462_122288068_122288157_122289212_122289399_122297486
ES.11427.2	chr14	+	6291	7	Antisense	novelGene_ENSMUSG00000115121.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGTAGTCCATCTGTC	759	False	NA	NA	False	AGTAAA	-20	NA	122281532	122305930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_122284553_122284739_122286596_122287404_122287462_122288068_122288157_122289212_122289399_122300788_122301205_122305262
ES.11427.3	chr14	+	1280	4	Intergenic	novelGene_9525	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATAAAATAA	6216	False	NA	NA	False	NA	NA	NA	122286989	122298020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122287462_122288068_122288157_122289212_122289399_122297486
ES.11428.1	chr14	+	3314	19	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2074	-211	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	322.759035600444	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTATTTTATTGGATGA	NA	False	NA	91	True	AATACA	-15	NA	122342375	122396805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122342444_122343455_122343556_122344199_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.10	chr14	+	5984	16	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	1	271	1	-271	intron_retention	FALSE	canonical	3	817	junction_12	63.2945144191466	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344450	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739
ES.11428.11	chr14	+	4125	16	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	2	-273	intron_retention	FALSE	canonical	0	0	junction_10	273.308177704217	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATCACTCCCT	NA	False	NA	29	True	AATAAA	-14	NA	122344451	122396743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122383986_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.12	chr14	+	2971	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	10	-210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.832660320816	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTATTGGATGAT	NA	False	NA	92	True	AATACA	-16	NA	122344459	122396806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122357700_122357775_122361117_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.14	chr14	+	3039	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	29	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	341.048200405749	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTACGTTCCAAAG	NA	False	NA	8	True	ATTAAA	-10	NA	122344478	122397006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379847_122380833_122380923_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.15	chr14	+	2698	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	33	-272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	261.976911852457	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTATCACTCCCTG	NA	False	NA	30	True	AATAAA	-15	NA	122344482	122396744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389454_122392809_122392912_122396060
ES.11428.16	chr14	+	3854	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	35	-271	intron_retention	FALSE	canonical	3	817	junction_11	129.716854040723	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344484	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.17	chr14	+	2806	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	37	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	233.792701647742	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344486	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392919_122396060
ES.11428.18	chr14	+	2611	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	44	-280	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	236.89769005956	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTCTTCATTGTATC	NA	False	NA	22	True	AATAAA	-7	NA	122344493	122396736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122396060
ES.11428.19	chr14	+	2743	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	48	-272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	256.731235605721	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTATCACTCCCTG	NA	False	NA	30	True	AATAAA	-15	NA	122344497	122396744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060_122396634_122396677
ES.11428.2	chr14	+	4326	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2073	-210	intron_retention	FALSE	canonical	3	10	junction_1	254.662664449188	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTATTGGATGAT	NA	False	NA	92	True	AATACA	-16	NA	122342376	122396806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122343556_122344199_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.21	chr14	+	2014	4	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	52	24819	-48	-2693	5prime_fragment	FALSE	canonical	3	857	junction_3	71.5867771775393	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTAATGGGATATAGT	NA	False	NA	NA	False	AATAAA	-22	NA	122344501	122372197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691
ES.11428.22	chr14	+	2154	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-48	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	264.559510082325	697	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTTTGTGACTACCTT	NA	False	NA	16	True	AATAAA	-21	NA	122344501	122396183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387396_122388187_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.23	chr14	+	4749	15	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-48	54	intron_retention	FALSE	canonical	3	849	junction_5	127.78579413876	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTTTTGTGACTACCT	NA	False	NA	15	True	AATAAA	-20	NA	122344501	122396182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.24	chr14	+	2767	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-48	-280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	263.470794159429	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTCTTCATTGTATC	NA	False	NA	22	True	AATAAA	-7	NA	122344501	122396736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382516_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.25	chr14	+	3417	16	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	52	2787	-48	-1899	5prime_fragment	FALSE	canonical	3	817	junction_12	63.2945144191466	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGATTGACTAGATG	NA	False	NA	NA	False	NA	NA	NA	122344501	122394229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739
ES.11428.26	chr14	+	4206	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-48	-273	intron_retention	FALSE	canonical	3	817	junction_11	129.531909410599	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATCACTCCCT	NA	False	NA	29	True	AATAAA	-14	NA	122344501	122396743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.27	chr14	+	2715	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-47	-271	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	270.049295911362	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344502	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.3	chr14	+	3688	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2061	52	intron_retention	FALSE	canonical	3	10	junction_1	254.662664449188	697	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGTTTTGTGACTAC	NA	False	NA	13	True	AATAAA	-18	NA	122342388	122396180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122343556_122344199_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.30	chr14	+	3087	15	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-33	-2146	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	244.664117949986	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTGTTTGGTGTAT	NA	False	NA	NA	False	NA	NA	NA	122344516	122393982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739
ES.11428.32	chr14	+	4213	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	263.683692790718	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACTTACGTTCCAAAGT	NA	False	NA	9	True	ATTAAA	-11	NA	122344537	122397007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122386058_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.33	chr14	+	2821	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-1	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	333.491023830895	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344548	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122386419_122386504_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.35	chr14	+	2696	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	1	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	264.356581805239	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344550	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363573_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.36	chr14	+	2271	18	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	22	-271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	256.731235605721	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344571	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060_122396284_122396726
ES.11428.37	chr14	+	2622	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	23	-281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	264.254309035349	707	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTCTTCATTGTAT	NA	False	NA	21	True	AATAAA	-6	NA	122344572	122396735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374833_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.38	chr14	+	2579	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	32	-271	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	272.827874105431	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344581	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.39	chr14	+	2566	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	255	-280	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	255.74760965403	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTCTTCATTGTATC	NA	False	NA	22	True	AATAAA	-7	NA	122344934	122396736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122345072_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.4	chr14	+	3503	19	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2051	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	322.759035600444	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCAAAGTGTAGTAATTT	NA	False	NA	19	True	ATTAAA	-21	NA	122342398	122397017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122342444_122343455_122343556_122344199_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.40	chr14	+	6198	14	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	22319	272	22089	-272	3prime_fragment	FALSE	canonical	3	817	junction_9	133.927561450122	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTATCACTCCCTG	NA	False	NA	30	True	AATAAA	-15	NA	122366768	122396744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.41	chr14	+	4821	14	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	23475	-273	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	291.105584863055	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATCACTCCCT	NA	False	NA	29	True	AATAAA	-14	NA	122368154	122396743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122370820_122374783_122374914_122377061_122377187_122378600_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.42	chr14	+	4344	5	NIC	ENSMUSG00000025544.14	novel	1494	13	NA	NA	38953	51	intron_retention	FALSE	canonical	3	928	junction_1	176.869125344137	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTGTTTTGTGACTA	7827	False	NA	12	True	AATAAA	-17	NA	122383632	122396179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.43	chr14	+	3295	5	NIC	ENSMUSG00000025544.14	novel	1494	13	NA	NA	39840	-273	intron_retention	FALSE	canonical	3	817	junction_1	212.890083141512	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATCACTCCCT	448	False	NA	29	True	AATAAA	-14	NA	122384519	122396743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122385458_122387261_122387422_122388145_122389488_122392739_122392912_122396060
ES.11428.44	chr14	+	4244	4	NIC	ENSMUSG00000025544.14	novel	1494	13	NA	NA	40341	-273	intron_retention	FALSE	canonical	3	989	junction_1	174.264167286336	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATCACTCCCT	949	False	NA	29	True	AATAAA	-14	NA	122385020	122396743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.5	chr14	+	3768	19	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2027	-271	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	322.465157463218	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122342422	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122343005_122343455_122343556_122344199_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.7	chr14	+	2794	17	NNC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-27	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	342.104881578735	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTATCACTCCCTGC	NA	False	NA	31	True	AATAAA	-16	NA	122344422	122396745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122344848_122361127_122361196_122363517_122363616_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388225_122389375_122389488_122392739_122392912_122396060
ES.11428.8	chr14	+	2209	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-3	55	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	270.049295911362	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTTTGTGACTACCTT	NA	False	NA	16	True	AATAAA	-21	NA	122344446	122396183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ES.11428.9	chr14	+	3717	15	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	-2	-7	intron_retention	FALSE	canonical	0	0	junction_8	281.341647199592	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTACGTTCCAAAGTGT	NA	False	NA	11	True	ATTAAA	-13	NA	122344447	122397009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122388298_122389375_122389488_122392739_122392912_122396060
ES.11429.1	chr14	-	4361	1	Antisense	novelGene_ENSMUSG00000025544.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122380051	122375690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_122375700_122380100
ES.1143.1	chr1	-	157	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	109436494	109436337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_109436300_109436500
ES.11430.1	chr14	+	986	5	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-17	24038	-17	-24031	5prime_fragment	FALSE	canonical	3	648	junction_1	14.6180539060437	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTATGGGGTCTACT	NA	False	NA	13	True	AATAAA	-26	NA	122419098	122615608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195
ES.11430.10	chr14	+	838	5	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	324.77482584092	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122419123	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122608652_122608842_122616614_122616783_122621609_122621735_122639358
ES.11430.11	chr14	+	543	3	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	324	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122419123	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122548655_122548843_122639358
ES.11430.12	chr14	+	1508	2	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-29549	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122419123	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122608652
ES.11430.13	chr14	+	1820	4	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-29549	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	303.362269682086	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122419123	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122576019_122576145_122608652
ES.11430.14	chr14	+	4341	6	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	643	junction_5	15.8290871499275	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	122419123	122639639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122616783_122621609_122621735_122639358
ES.11430.15	chr14	+	1323	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.579888135035	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122419123	122639643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122497159_122497263_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.16	chr14	+	1209	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	242.857310924312	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	122419123	122639639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122608659_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.17	chr14	+	1095	6	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	8	-24031	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	325.227059144838	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTATGGGGTCTACT	NA	False	NA	13	True	AATAAA	-26	NA	122419123	122615608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122514620_122514755_122548655_122548843_122608652_122608842_122613293_122613396_122615195
ES.11430.18	chr14	+	1028	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	249.458357691664	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122419129	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.19	chr14	+	2197	6	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	14	21471	14	-21464	5prime_fragment	FALSE	canonical	3	648	junction_1	50.4245971724118	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGAGTACTGACATAA	NA	False	NA	NA	False	AATAAA	-20	NA	122419129	122618175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614
ES.11430.2	chr14	+	1250	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	-15	-4	-15	4	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTTGCTATTGTCTAT	NA	False	NA	16	True	AATAAA	-26	NA	122419100	122639650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.20	chr14	+	3013	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	16	-2	intron_retention	FALSE	canonical	3	643	junction_6	48.8455616089004	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122419131	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.22	chr14	+	1823	1	Intergenic	novelGene_9527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCCCAAAATCAAATAACA	NA	False	NA	NA	False	NA	NA	NA	122461745	122463568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122461700_122463600
ES.11430.23	chr14	+	159	1	Intergenic	novelGene_9528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAATTCTTTAAA	14	False	NA	NA	False	NA	NA	NA	122474465	122474624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122474500_122474600
ES.11430.24	chr14	+	4132	4	Intergenic	novelGene_9529	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTTTAAAAGAGTGTA	299	False	NA	NA	False	NA	NA	NA	122475120	122523785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122475499_122475708_122475901_122476015_122479401_122523608
ES.11430.25	chr14	+	1076	7	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	-2368	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.820500216784	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	8631	False	NA	9	True	AATAAA	-19	NA	122493084	122639643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122493198_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.26	chr14	+	3704	1	Intergenic	novelGene_9530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTATGGTTGGAGGTCC	NA	False	NA	NA	False	NA	NA	NA	122495798	122499502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122495800_122499500
ES.11430.27	chr14	+	278	1	Intergenic	novelGene_9531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAATTTTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	122497597	122497875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122497600_122497900
ES.11430.28	chr14	+	163	1	Intergenic	novelGene_9532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	122497601	122497764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122497600_122497800
ES.11430.29	chr14	+	1271	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19423	-2	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122514875	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.3	chr14	+	1124	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	-13	-16985	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	243.57448678432	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAAACA	NA	False	NA	NA	False	NA	NA	NA	122419102	122622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122622486
ES.11430.30	chr14	+	2057	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19425	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	295.291778373527	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	122514877	122639639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122518287_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.31	chr14	+	1418	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19432	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	295.938654960787	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	122514884	122639639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122517655_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.32	chr14	+	1725	3	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19443	-29549	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	284	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122514895	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122548655_122548843_122608652
ES.11430.33	chr14	+	2241	3	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19458	-79296	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	44	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122514910	122560343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122548655_122548843_122558374
ES.11430.34	chr14	+	1397	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19458	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	297.438622870333	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTAAGCTTATGGTTTT	NA	False	NA	4	True	AATAAA	-14	NA	122514910	122639638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122518119_122518287_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.35	chr14	+	2010	5	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-29574	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	286.831287519336	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122514913	122610065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122517655_122518119_122518287_122548655_122548843_122608652
ES.11430.37	chr14	+	1495	2	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-29574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122514913	122610065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122608652
ES.11430.38	chr14	+	1332	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	296.587439678419	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122514913	122639643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122517594_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.39	chr14	+	1500	10	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	322.287579578576	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122514913	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122517594_122518119_122518287_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.4	chr14	+	1236	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.750374149373	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTTTGCTATTGTCT	NA	False	NA	14	True	AATAAA	-24	NA	122419122	122639648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419204_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.40	chr14	+	4512	7	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-14340	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	225.089920303469	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTTGACCCTGTGTAT	NA	False	NA	NA	False	TATAAA	-2	NA	122514913	122625299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609
ES.11430.41	chr14	+	2500	4	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	-29549	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	310.659871170313	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122514913	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122514996_122517493_122518287_122548655_122548843_122608652
ES.11430.42	chr14	+	1211	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	22990	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	243.406018405294	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122518442	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122518503_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.43	chr14	+	1135	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	72369	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.308194198079	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122567821	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122567863_122576014_122576145_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.44	chr14	+	10853	1	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	114519	-18815	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTACATAGATACAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	122609971	122620824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122610000_122620800
ES.11430.45	chr14	+	4648	1	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	115499	-24040	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATGTTCAAGAATGTATG	NA	False	NA	4	True	AATAAA	-17	NA	122610951	122615599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122611000_122615600
ES.11430.46	chr14	+	4550	3	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	117190	-3	intron_retention	FALSE	canonical	3	643	junction_2	21	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTATGGTTTTGCTAT	NA	False	NA	9	True	AATAAA	-19	NA	122612642	122639643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122616783_122621609_122621735_122639358
ES.11430.5	chr14	+	1193	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.750374149373	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTATGGTTTTGCTATT	NA	False	NA	10	True	AATAAA	-20	NA	122419122	122639644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419165_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ES.11430.6	chr14	+	1302	9	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	299.424447899633	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	122419122	122639639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122638888_122638974_122639358
ES.11430.7	chr14	+	4450	7	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	7	0	intron_retention	FALSE	canonical	1	5	junction_3	305.431798169957	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419122	122639646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122558374_122558476_122608652_122608842_122613293_122616783_122621609_122621735_122639358
ES.11430.8	chr14	+	1797	4	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	7	-29549	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	301.245193599278	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122419122	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122419194_122548655_122548843_122558374_122558476_122608652
ES.11430.9	chr14	+	1696	3	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	7	29556	7	-29549	5prime_fragment	FALSE	canonical	3	648	junction_1	10.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTCACTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	122419122	122610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122419194_122548655_122548843_122608652
ES.11431.1	chr14	-	177	1	Intergenic	novelGene_9526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTTAAAAAGG	8731	False	NA	NA	False	NA	NA	NA	122430518	122430341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122430300_122430500
ES.11432.1	chr14	-	3364	1	Intergenic	novelGene_9533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	122503924	122500560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122500600_122503900
ES.11433.1	chr14	-	173	1	Intergenic	novelGene_9534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAACCCAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	122511190	122511017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122511000_122511200
ES.11434.1	chr14	-	274	1	Intergenic	novelGene_9535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	122536962	122536688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122536700_122537000
ES.11435.1	chr14	-	2433	1	Antisense	novelGene_ENSMUSG00000025545.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	122548778	122546345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_122546300_122548800
ES.11435.2	chr14	-	2169	2	Antisense	novelGene_ENSMUSG00000025545.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122548778	122546348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_122546469_122546729
ES.11436.1	chr14	-	1041	1	Intergenic	novelGene_9536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	122618841	122617800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122617800_122618800
ES.11437.1	chr14	+	311	1	Intergenic	novelGene_9537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	122652758	122653069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122652800_122653100
ES.11438.1	chr14	+	1580	2	Intergenic	novelGene_9538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATCCGTTTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-44	NA	122657021	122658994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122657050_122657442
ES.11439.1	chr14	+	1459	1	Intergenic	novelGene_9539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	122683304	122684763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122683300_122684800
ES.1144.1	chr1	+	5966	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	109542244	109548210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_109542200_109548200
ES.11440.1	chr14	+	1638	1	Antisense	novelGene_ENSMUSG00000041703.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAACAGTCTTGCTTAG	NA	False	NA	NA	False	AATAAA	-10	NA	122701921	122703559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_122701900_122703600
ES.11440.2	chr14	+	369	3	Antisense	novelGene_ENSMUSG00000041703.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTTGCTTAGACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	122702346	122703564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_+_122702409_122703127_122703265_122703394
ES.11441.1	chr14	-	5823	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	808	-1864	808	1864	multi-exon	FALSE	canonical	3	83	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	122702281	122692342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.2	chr14	-	4040	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	796	-69	796	69	multi-exon	FALSE	canonical	3	83	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTGCCTTTCCCTGAT	NA	False	NA	43	True	TTTAAA	-22	NA	122702293	122694137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.4	chr14	-	4518	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	206	43	206	-43	multi-exon	FALSE	canonical	3	83	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATGGTGATGGACA	NA	False	NA	-69	True	AATAAA	-32	NA	122702883	122694249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.5	chr14	-	2979	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1425	363	1425	-363	multi-exon	FALSE	canonical	3	83	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGTTTATTTGATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	122701664	122694569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.6	chr14	-	3374	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	819	574	819	-574	multi-exon	FALSE	canonical	3	83	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATGTGAAAACTCGACT	NA	False	NA	NA	False	NA	NA	NA	122702270	122694780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.7	chr14	-	3260	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	829	678	829	-678	multi-exon	FALSE	canonical	3	83	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAAGATTGTCATTTATGA	NA	False	NA	NA	False	AATATA	-14	NA	122702260	122694884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11441.8	chr14	-	2283	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	837	1647	837	751	multi-exon	FALSE	canonical	3	83	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGTCAAGCCAAGTGC	NA	False	NA	NA	False	AAAAAG	-13	NA	122702252	122695853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_122697188_122701303
ES.11442.1	chr14	+	2441	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	-29	28	-29	-28	multi-exon	FALSE	canonical	2	3	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGGCAACTTGATTG	629	False	NA	NA	False	ATTAAA	-15	NA	122712817	122717236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122714160_122715951_122716116_122716301
ES.11442.2	chr14	+	2871	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	48	-479	48	479	multi-exon	FALSE	canonical	2	3	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTTTTCCCCCCCT	706	False	NA	23	True	AATAAA	-19	NA	122712894	122717743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122714160_122715951_122716116_122716301
ES.11442.3	chr14	+	1302	1	NIC	ENSMUSG00000061524.9	novel	2440	3	NA	NA	71	-2243	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGTGTGTGTGTGTG	729	False	NA	NA	False	AATAAA	-14	NA	122712917	122714219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122712900_122714200
ES.11443.1	chr14	-	241	1	Antisense	novelGene_ENSMUSG00000061524.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	122717068	122716827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr14_-_122716800_122717100
ES.11444.1	chr14	+	1583	1	FSM	ENSMUSG00000075465.3	ENSMUST00000100294.3	1536	1	-16	-31	-16	31	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122727981	122729564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122728000_122729600
ES.11445.1	chr14	-	216	1	Intergenic	novelGene_9540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGAAAAAAGTTCATCT	NA	False	NA	NA	False	NA	NA	NA	122755398	122755182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122755200_122755400
ES.11446.1	chr14	+	177	1	Intergenic	novelGene_9541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	122770464	122770641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122770500_122770600
ES.11446.2	chr14	+	366	1	Intergenic	novelGene_9542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACAATTGGATATT	NA	False	NA	NA	False	NA	NA	NA	122770465	122770831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122770500_122770800
ES.11447.1	chr14	+	2697	24	NNC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	-212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.1084277677059	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771523	123127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896197_122901672_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.10	chr14	+	2507	25	NNC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.5512652526005	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771772	123127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122899069_122899126_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.11	chr14	+	4607	1	Intergenic	novelGene_9545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122938684	122943291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_122938700_122943300
ES.11447.2	chr14	+	2508	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-32	116	-17	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771718	123127240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.3	chr14	+	2699	25	NNC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	31.5765988862357	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771722	123127240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123065775_123065971_123114175_123114317_123124458_123124537_123126898
ES.11447.4	chr14	+	2556	25	NNC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.7050818805162	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771723	123127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122815832_122815889_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.5	chr14	+	1151	10	ISM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	-22	230870	-7	-5253	5prime_fragment	FALSE	canonical	3	76	junction_1	11.3409560421782	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAACAGCAGT	NA	False	NA	NA	False	NA	NA	NA	122771728	122896486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089
ES.11447.6	chr14	+	2252	21	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	35.7349968518258	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771743	123127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122771872_122795126_122795205_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.7	chr14	+	2559	24	NNC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	36.0216276139021	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTT	NA	False	NA	13	True	AATAAA	-16	NA	122771748	123127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123065775_123065971_123114175_123114317_123124458_123124537_123126898
ES.11447.8	chr14	+	2361	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	27.256245019481	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATTAGTTTGCCCTTT	NA	False	NA	12	True	AATAAA	-15	NA	122771750	123127236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11447.9	chr14	+	2596	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	10	-14	4	14	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTAGCTTTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	122771760	123127370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ES.11448.1	chr14	-	2273	1	Intergenic	novelGene_9543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTCTCCACCAGGACCA	NA	False	NA	NA	False	AAAAAG	-27	NA	122881046	122878773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122878800_122881000
ES.11449.1	chr14	-	173	1	Intergenic	novelGene_9544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2165	False	NA	NA	False	NA	NA	NA	122915428	122915255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_122915300_122915400
ES.1145.1	chr1	+	162	1	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	109935036	109935198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_109935000_109935200
ES.11450.1	chr14	-	2365	1	Intergenic	novelGene_9546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123107622	123105257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_123105300_123107600
ES.11451.1	chr14	-	1180	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	-115	11	-115	0	multi-exon	FALSE	canonical	3	34	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTGTTGCTGTTTGG	NA	False	NA	-13	True	ATTAAA	-18	NA	123150689	123128282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123129229_123137887_123137945_123150512
ES.11451.2	chr14	-	1515	4	NNC	ENSMUSG00000041625.16	novel	524	4	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_3	17.9876500843094	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTGTTGCTGTTTGG	NA	False	NA	-13	True	ATTAAA	-18	NA	123150568	123128282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123129229_123137887_123137945_123142951_123143408_123150512
ES.11451.3	chr14	-	5078	1	NIC	ENSMUSG00000041625.16	novel	686	4	NA	NA	17129	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACGAGTTTGCTGTTG	NA	False	NA	-21	True	ATTAAA	-10	NA	123133368	123128290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123128300_123133400
ES.11451.4	chr14	-	1252	3	FSM	ENSMUSG00000041625.16	ENSMUST00000162164.2	609	3	-36	-607	-1	-8	multi-exon	TRUE	canonical	3	7	junction_2	16.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACGAGTTTGCTGTTG	NA	False	NA	-21	True	ATTAAA	-10	NA	123150533	123128290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123129229_123137887_123137945_123150276
ES.11452.1	chr14	+	178	1	Intergenic	novelGene_9547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCACATTTTC	NA	False	NA	NA	False	NA	NA	NA	123209611	123209789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_123209600_123209800
ES.11453.1	chr14	-	3505	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	4	-93	-4	93	multi-exon	TRUE	canonical	3	136	junction_13	13.8696352514015	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGCCCACTGTCCATT	NA	False	NA	97	True	AGTAAA	-14	NA	123220691	123156289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.11	chr14	-	3313	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	38.2839509410142	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220686	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.12	chr14	-	3287	18	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.1194526545947	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220641	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163475_123165024_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.13	chr14	-	3177	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	55.6505559271424	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220638	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.14	chr14	-	4621	2	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-2767	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123162101	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158653
ES.11453.15	chr14	-	3271	17	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.2694786019752	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220642	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123209151_123209369_123210581_123210694_123215485_123215699_123220583
ES.11453.16	chr14	-	3404	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	41.7303918689524	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220661	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182273_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.17	chr14	-	3740	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	142	0	intron_retention	FALSE	canonical	0	0	junction_17	64.5657305698142	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123221305	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182273_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220797
ES.11453.18	chr14	-	3130	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	13	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	44.70877989836	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220616	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.19	chr14	-	3214	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	16	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	53.9361601803465	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220613	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.2	chr14	-	3236	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	44.1076453123492	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220647	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.20	chr14	-	5204	2	FSM	ENSMUSG00000041594.19	ENSMUST00000228661.2	856	2	-3345	-1003	-3345	3	multi-exon	FALSE	canonical	3	190	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123162679	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123157556_123158644
ES.11453.21	chr14	-	3291	18	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.7135629907844	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220638	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158681_123163402_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.22	chr14	-	4589	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	5	3	intron_retention	FALSE	canonical	3	7	junction_10	43.0130339984289	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220682	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123180770_123182085_123182273_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.24	chr14	-	3291	19	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.2345429867558	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220634	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157131_123157187_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.25	chr14	-	3644	18	FSM	ENSMUSG00000041594.19	ENSMUST00000148661.2	2719	18	-140	-785	1	3	multi-exon	FALSE	canonical	3	7	junction_17	41.7946868363775	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220694	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220350
ES.11453.26	chr14	-	3148	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	54.2087616880334	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220647	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123220583
ES.11453.27	chr14	-	3289	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	60.385153655571	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220647	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182273_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.28	chr14	-	3053	16	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-11	3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	61.1804616596581	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTTGGTTTCTTT	NA	False	NA	0	True	AGTAAA	-22	NA	123220640	123156386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123209151_123209369_123210581_123210698_123220583
ES.11453.29	chr14	-	3703	19	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	63.61732138535	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220672	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123192042_123192453_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.3	chr14	-	3092	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_9	66.4638059397745	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220646	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123182085_123182273_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.30	chr14	-	3364	18	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	42.0616617717781	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220658	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158653_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.31	chr14	-	3256	17	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	57.966821059551	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220638	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158653_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.32	chr14	-	3302	18	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	43.4097719931615	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220638	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179348_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.34	chr14	-	2737	14	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	48.2518050065542	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220656	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123220583
ES.11453.36	chr14	-	3444	19	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	56.1860061220818	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGGTTTCT	NA	False	NA	-2	True	AGTAAA	-20	NA	123220638	123156388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123216369_123216461_123220583
ES.11453.38	chr14	-	3480	19	NIC	ENSMUSG00000041594.19	novel	2952	19	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	63.6673695908452	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220656	123156389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123217282_123217487_123220583
ES.11453.39	chr14	-	3342	17	NIC	ENSMUSG00000041594.19	novel	3274	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	58.9657938448216	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220629	123156389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170932_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.4	chr14	-	4002	20	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	77.3612241550642	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220671	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170932_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123192042_123192453_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123216369_123216461_123220583
ES.11453.41	chr14	-	2767	19	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.1890586131839	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220643	123156389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123156743_123157332_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.42	chr14	-	3415	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	-7	8	-7	-1	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAACTGTCTTGGTTT	NA	False	NA	-4	True	AGTAAA	-18	NA	123220702	123156390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.43	chr14	-	3667	20	NNC	ENSMUSG00000041594.19	novel	2952	19	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	64.6335933168004	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGAAAACTGTCTTGGTT	NA	False	NA	-5	True	AGTAAA	-17	NA	123220660	123156391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123216369_123216461_123217282_123217487_123220583
ES.11453.46	chr14	-	3261	16	NIC	ENSMUSG00000041594.19	novel	2719	18	NA	NA	5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	45.8144082140106	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAAAACTGTCTTGG	NA	False	NA	-7	True	AGTAAA	-15	NA	123220647	123156393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123220350
ES.11453.47	chr14	-	3573	19	NIC	ENSMUSG00000041594.19	novel	2952	19	NA	NA	-8	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	56.0337200065976	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATGAAAACTGTCTTG	NA	False	NA	-8	True	AGTAAA	-14	NA	123220660	123156394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123217282_123217487_123220583
ES.11453.49	chr14	-	3166	19	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.1890586131839	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACTGTCATGAAAACTG	NA	False	NA	-13	True	AGTAAA	-9	NA	123220659	123156399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157014_123157210_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.50	chr14	-	3273	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	23	120	15	-113	multi-exon	FALSE	canonical	3	136	junction_13	13.8696352514015	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTAGATCTCAACAATT	NA	False	NA	-116	True	TATAAA	-21	NA	123220672	123156502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ES.11453.51	chr14	-	3383	13	NIC	ENSMUSG00000041594.19	novel	2237	14	NA	NA	0	1329	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	72.8336670472904	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTATGATGTTTCG	NA	False	NA	NA	False	NA	NA	NA	123220629	123168567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182273_123182919_123183013_123187900_123188005_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.6	chr14	-	3217	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	44.1045898263435	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220713	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123210581_123210698_123215485_123215699_123220583
ES.11453.7	chr14	-	3216	18	NNC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	60.592118664812	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220657	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178781_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
ES.11453.9	chr14	-	6682	4	ISM	ENSMUSG00000041594.19	ENSMUST00000126494.8	1054	8	3154	-935	3154	0	intron_retention	FALSE	canonical	3	156	junction_2	14.9888847706114	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123170289	123156382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963
ES.11454.1	chr14	-	6711	43	NIC	ENSMUSG00000000197.9	novel	7122	44	NA	NA	38	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.46074872858838	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTATTGTGACCT	NA	False	NA	NA	False	AATAAA	-13	NA	123864335	123514052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr14_-_123515774_123518511_123518630_123520995_123521149_123522624_123522776_123525121_123525280_123528378_123528495_123529143_123529277_123530839_123530934_123531745_123531895_123532804_123532874_123535437_123535558_123536282_123536358_123536559_123536667_123537311_123537406_123540109_123540209_123540291_123540413_123545740_123545848_123551443_123551549_123553395_123553564_123554406_123554539_123554632_123554754_123555245_123555303_123558665_123558789_123558871_123558964_123560711_123560782_123561202_123561305_123586173_123586248_123607349_123607492_123608889_123609027_123633618_123633694_123647107_123647246_123697648_123697841_123702075_123702244_123723797_123723930_123744892_123744980_123752712_123752818_123753042_123753186_123809351_123809507_123830093_123830223_123830323_123830464_123831897_123831982_123837254_123837402_123864227
ES.11454.2	chr14	-	5386	34	ISM	ENSMUSG00000000197.9	ENSMUST00000000201.7	7122	44	269	19990	1	2804	5prime_fragment	FALSE	canonical	0	0	junction_1	1.53800939884237	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTTCTAACTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	123864287	123534035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr14_-_123535558_123536282_123536358_123536559_123536667_123537311_123537406_123540109_123540209_123540291_123540413_123545740_123545848_123551443_123551549_123553395_123553564_123554406_123554539_123554632_123554754_123555245_123555303_123558665_123558789_123558871_123558964_123560711_123560782_123561202_123561305_123586173_123586248_123607349_123607492_123608889_123609027_123633618_123633694_123647107_123647246_123697648_123697841_123702075_123702244_123723797_123723930_123744892_123744980_123752712_123752818_123753042_123753186_123809351_123809507_123830093_123830223_123830323_123830464_123831897_123831982_123833882_123834066_123837254_123837402_123864227
ES.11454.3	chr14	-	2474	12	NNC	ENSMUSG00000000197.9	novel	2327	11	NA	NA	47	5703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.852802865422442	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGATTTGTTTTGAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	123864501	123717363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr14_-_123718259_123723797_123723930_123744892_123744980_123752712_123752818_123753042_123753186_123809351_123809507_123830093_123830223_123830323_123830464_123831897_123831982_123833882_123834066_123837254_123837402_123864227
ES.11454.4	chr14	-	4038	1	Intergenic	novelGene_9548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTTAACAACTGGGAT	NA	False	NA	NA	False	NA	NA	NA	123817601	123813563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_123813600_123817600
ES.11455.1	chr14	+	96	1	Intergenic	novelGene_9549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	124267304	124267400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_+_124267300_124267400
ES.11456.1	chr14	-	3262	1	Intergenic	novelGene_9550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAACAAGTAATTCGAGAA	NA	False	NA	NA	False	GATAAA	-31	NA	124292156	124288894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_124288900_124292200
ES.11457.1	chr14	-	185	1	Intergenic	novelGene_9551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAACTTCCTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	124698190	124698005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr14_-_124698000_124698200
ES.11458.1	chr15	-	325	1	Intergenic	novelGene_9552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAACAAGACAAGA	817	False	NA	NA	False	NA	NA	NA	3302728	3302403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_3302400_3302700
ES.11459.1	chr15	-	1418	10	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-29	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5950180872841	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAACTGGAA	8067	False	NA	NA	False	NA	NA	NA	3333037	3309583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3310232_3310504_3310589_3312299_3312428_3312938_3313005_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
ES.11459.2	chr15	-	1208	7	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-29	127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.996295838936	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8067	False	NA	NA	False	AATAAA	-21	NA	3333037	3309981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3310232_3310504_3310589_3312299_3312428_3323334_3323404_3327585_3327689_3330586_3330676_3332552
ES.11459.3	chr15	-	955	9	FSM	ENSMUSG00000091119.3	ENSMUST00000165386.2	798	9	-30	-127	-30	127	multi-exon	FALSE	canonical	2	12	junction_4	8.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8066	False	NA	NA	False	AATAAA	-21	NA	3333038	3309981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
ES.11459.4	chr15	-	3094	4	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	3	127	intron_retention	FALSE	canonical	2	5	junction_3	9.10433352249844	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGCATTTATTTTGA	8099	False	NA	NA	False	AATAAA	-21	NA	3333005	3309981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3312428_3327582_3327689_3330586_3330676_3332552
ES.11459.5	chr15	-	3246	6	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-16	126	intron_retention	FALSE	canonical	1	3	junction_1	8.5463442476886	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTGCATTTATTTTG	8080	False	NA	NA	False	AATAAA	-20	NA	3333024	3309982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3312428_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332552
ES.11459.6	chr15	-	3881	1	NIC	ENSMUSG00000091119.3	novel	1327	8	NA	NA	16813	124	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	3313865	3309984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_3310000_3313900
ES.11459.7	chr15	-	1187	2	NNC	ENSMUSG00000091119.3	novel	798	9	NA	NA	-29	-19757	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATTATACTAAAATGT	8067	False	NA	NA	False	NA	NA	NA	3333037	3329973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3330676_3332552
ES.1146.1	chr1	-	2745	4	NNC	ENSMUSG00000047216.9	novel	3914	12	NA	NA	71637	327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTTTTATGGAACC	NA	False	NA	NA	False	AATAAA	-33	NA	110833456	110815728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_110817919_110820914_110821167_110823112_110823231_110833271
ES.11460.1	chr15	-	4174	11	FSM	ENSMUSG00000055737.13	ENSMUST00000069451.11	4175	11	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	1.02469507659596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATCTTATGTTTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	3612711	3347241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_3350205_3350470_3350541_3355379_3355471_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
ES.11460.2	chr15	-	4180	10	NNC	ENSMUSG00000055737.13	novel	4175	11	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	1.06574033851394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTGATCTTATGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	3612718	3347243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3350205_3350470_3350541_3355379_3355471_3357455_3357625_3362828_3363008_3370400_3370577_3376931_3377084_3418129_3418196_3487411_3487491_3612481
ES.11461.1	chr15	-	3733	11	Fusion	ENSMUSG00000022184.9_ENSMUSG00000041935.11	novel	1565	7	NA	NA	4	1873	multi-exon	FALSE	canonical	1	1	junction_6	103.370982388676	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTATTGGTGTGCCTT	2184	False	NA	NA	False	NA	NA	NA	4025222	3993053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.10	chr15	-	5388	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.283597861265	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTCTTACTTTCTT	2188	False	NA	-12	True	AATAAA	-18	NA	4025218	4011518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021517_4021947_4025096
ES.11461.12	chr15	-	5576	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2170	False	NA	-13	True	AATAAA	-17	NA	4025236	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
ES.11461.13	chr15	-	5254	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	22	-3	intron_retention	FALSE	canonical	3	21	junction_4	92.0921277851696	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2202	False	NA	-13	True	AATAAA	-17	NA	4025204	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021550_4021839_4021947_4025096
ES.11461.14	chr15	-	5154	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	118.670411925916	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2178	False	NA	-13	True	AATAAA	-17	NA	4025228	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
ES.11461.15	chr15	-	5535	5	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	12	junction_2	106.259999529456	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2178	False	NA	-13	True	AATAAA	-17	NA	4025228	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021947_4025096
ES.11461.16	chr15	-	5183	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2182	False	NA	-13	True	AATAAA	-17	NA	4025224	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
ES.11461.17	chr15	-	7096	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	8	-3	intron_retention	FALSE	canonical	3	175	junction_3	37.6961536499415	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2188	False	NA	-13	True	AATAAA	-17	NA	4025218	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4015962_4018072_4018188_4019036_4021347_4021839_4021947_4025096
ES.11461.18	chr15	-	5477	6	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	91.7029988604517	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2178	False	NA	-13	True	AATAAA	-17	NA	4025228	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021947_4025096
ES.11461.19	chr15	-	5037	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	95.3217708605962	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2183	False	NA	-13	True	AATAAA	-17	NA	4025223	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.2	chr15	-	1347	7	NNC	ENSMUSG00000022184.9	novel	1565	7	NA	NA	68	-22	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	4.11298755975102	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATTTTGTGGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	4008987	3994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005332_4007243_4007480_4008723
ES.11461.20	chr15	-	4975	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.283597861265	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2172	False	NA	-13	True	AATAAA	-17	NA	4025234	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021241_4021839_4021947_4025096
ES.11461.21	chr15	-	5250	8	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	118.295893281834	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2208	False	NA	-13	True	AATAAA	-17	NA	4025198	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4024776_4024870_4025096
ES.11461.22	chr15	-	5164	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	110.859896566191	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCTTACTTTCT	2182	False	NA	-13	True	AATAAA	-17	NA	4025224	4011519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4024776_4024870_4025096
ES.11461.23	chr15	-	5077	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	86.6071590574359	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGTTTCTTACTTTC	2165	False	NA	-14	True	AATAAA	-16	NA	4025241	4011520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015952_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.26	chr15	-	5153	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	111.908320612107	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGTTTCTTACTTTC	2178	False	NA	-14	True	AATAAA	-16	NA	4025228	4011520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021470_4021550_4021839_4021947_4025096
ES.11461.27	chr15	-	7180	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	2	-5	intron_retention	FALSE	canonical	3	175	junction_3	27.6541136180497	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTTGTTTCTTACTTT	2182	False	NA	-15	True	AATAAA	-15	NA	4025224	4011521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.28	chr15	-	5069	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	99.048271060125	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACTTGTTTCTTACTTT	2176	False	NA	-15	True	AATAAA	-15	NA	4025230	4011521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021941_4025096
ES.11461.3	chr15	-	1572	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	-32	25	-32	-25	multi-exon	FALSE	canonical	3	8	junction_6	2.40947204913349	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAATTTTGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	4009087	3994951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
ES.11461.30	chr15	-	5078	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-162	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	98.6744141102444	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTACTTGTTTCTTACTT	2018	False	NA	-16	True	AATAAA	-14	NA	4025388	4011522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025250
ES.11461.31	chr15	-	4978	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-2	100	-2	-100	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGTGTTTCCTAGTTTT	2178	False	NA	-110	True	ATTAAA	-19	NA	4025228	4011616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.32	chr15	-	5127	8	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	21	-100	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	120.730937144021	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGTGTTTCCTAGTTTT	2201	False	NA	-110	True	ATTAAA	-19	NA	4025205	4011616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021470_4021550_4021839_4021947_4024776_4024870_4025096
ES.11461.33	chr15	-	4739	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-16	353	-16	-353	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTTCCAGTTATCTTC	2164	False	NA	1	True	ATTAAA	-19	NA	4025242	4011869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.34	chr15	-	5224	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-10	-355	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTTCCAGTTATCT	2170	False	NA	-1	True	ATTAAA	-17	NA	4025236	4011871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
ES.11461.35	chr15	-	4832	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	1	-355	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTTCCAGTTATCT	2181	False	NA	-1	True	ATTAAA	-17	NA	4025225	4011871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
ES.11461.36	chr15	-	4609	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-17	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.965609145319	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTTTTCCAGTTAT	2163	False	NA	-3	True	ATTAAA	-15	NA	4025243	4011873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4012385_4012501_4015952_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.38	chr15	-	4463	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	11	-569	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	95.3217708605962	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGCCTGTCTCTCT	2191	False	NA	NA	False	NA	NA	NA	4025215	4012085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.39	chr15	-	4440	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	1	635	1	-635	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAAACGTTTATCACTC	2181	False	NA	NA	False	ATTAAA	-29	NA	4025225	4012151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.4	chr15	-	4589	4	NNC	ENSMUSG00000022184.9	novel	583	2	NA	NA	3136	26	intron_retention	FALSE	non_canonical	0	0	junction_2	5.65685424949238	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCATATT	NA	False	NA	NA	False	NA	NA	NA	4005919	4000739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4000995_4001110_4002278_4002698_4003439_4003492
ES.11461.40	chr15	-	4519	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	21	-648	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCCCACAATCCTTAA	2201	False	NA	NA	False	ATTAAA	-16	NA	4025205	4012164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
ES.11461.41	chr15	-	5788	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	8	-1391	intron_retention	FALSE	canonical	3	175	junction_3	27.6541136180497	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTAAATTGTTTTATT	2188	False	NA	NA	False	TATAAA	-30	NA	4025218	4012907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.42	chr15	-	3706	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-22	1392	-22	-1392	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAGTAAATTGTTTTAT	2158	False	NA	NA	False	TATAAA	-29	NA	4025248	4012908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.43	chr15	-	4173	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	1	-1395	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGTAAATTGTTT	2181	False	NA	NA	False	TATAAA	-26	NA	4025225	4012911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
ES.11461.44	chr15	-	3793	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-2	-1397	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGATGAGTAAATTGT	2178	False	NA	NA	False	TATAAA	-24	NA	4025228	4012913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
ES.11461.45	chr15	-	3623	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	21	-1399	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	95.3217708605962	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCTTGATGAGTAAATT	2201	False	NA	NA	False	TATAAA	-22	NA	4025205	4012915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.46	chr15	-	4357	3	ISM	ENSMUSG00000041935.11	ENSMUST00000228421.2	767	5	362	-1830	362	1830	3prime_fragment	FALSE	canonical	3	219	junction_2	31	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCACACACTCTGAT	6208	False	NA	NA	False	AATAGA	-20	NA	4021198	4013881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_4015962_4018072_4018188_4019036
ES.11461.47	chr15	-	1401	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-2	3677	-2	518	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGAAACTTATTTAT	2178	False	NA	NA	False	ATTAAA	-14	NA	4025228	4015193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.5	chr15	-	5107	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	-17	9629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.8799034972646	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTGATCATTAATAAAAC	2163	False	NA	NA	False	NA	NA	NA	4025243	4001887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4001906_4011520_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.6	chr15	-	3162	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	0	9629	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.783423156686	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTGATCATTAATAAAAC	2180	False	NA	NA	False	NA	NA	NA	4025226	4001887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_4001906_4011520_4014201_4019088_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.7	chr15	-	6106	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	3	-1033	3	1033	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCCCAAAAA	2183	False	NA	NA	False	ATTAAA	-24	NA	4025223	4010483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11461.8	chr15	-	9705	3	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	16	10	intron_retention	FALSE	canonical	3	219	junction_1	5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTTATATTTTATT	2196	False	NA	0	True	AATAAA	-30	NA	4025210	4011506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_4018188_4019036_4021947_4025096
ES.11461.9	chr15	-	5104	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	-22	-6	-22	6	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTTTCTTTTATATTT	2158	False	NA	-4	True	AATAAA	-26	NA	4025248	4011510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ES.11462.1	chr15	+	4214	4	NNC	ENSMUSG00000097662.2	novel	3526	3	NA	NA	-35	542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.05480466765633	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGGCAGCAGTTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	4025485	4045882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4025611_4026886_4026967_4028795_4028863_4041940
ES.11462.2	chr15	+	2139	1	ISM	ENSMUSG00000097662.2	ENSMUST00000180518.2	3526	3	17681	0	17681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTTTTTATGACTGC	7736	False	NA	NA	False	NA	NA	NA	4043201	4045340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_4043200_4045300
ES.11463.1	chr15	+	2280	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	11	1236	11	128	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCATGTGCATTTGTG	NA	False	NA	23	True	ATTAAA	-23	NA	4055875	4183590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.10	chr15	+	1820	16	ISM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	8875	1242	8574	122	3prime_fragment	FALSE	canonical	3	193	junction_6	28.1917245540838	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAATTTTCATGTGCA	NA	False	NA	17	True	ATTAAA	-17	NA	4064739	4183584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.11	chr15	+	2860	14	ISM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	21081	1	205	-1	3prime_fragment	FALSE	canonical	3	193	junction_4	30.0380429400558	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTGTGTGTCCTCTT	7593	False	NA	15	True	AATAAA	-19	NA	4076945	4184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.12	chr15	+	3445	1	Intergenic	novelGene_9554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAGA	3743	False	NA	NA	False	NA	NA	NA	4116566	4120011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_4116600_4120000
ES.11463.13	chr15	+	2407	10	ISM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	64783	1	43907	-1	3prime_fragment	FALSE	canonical	3	223	junction_5	20.3415284031898	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTGTGTGTCCTCTT	684	False	NA	15	True	AATAAA	-19	NA	4120647	4184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.14	chr15	+	4579	6	ISM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	72203	1	-43937	-1	3prime_fragment	FALSE	canonical	3	223	junction_1	26.6278050165612	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTGTGTGTCCTCTT	8104	False	NA	15	True	AATAAA	-19	NA	4128067	4184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.2	chr15	+	3487	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	44	-4	44	4	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCCTCTTATTTG	NA	False	NA	20	True	AATAAA	-24	NA	4055908	4184830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.3	chr15	+	3369	18	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	88	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.4783304972407	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGAATGTGTGTGTCCT	NA	False	NA	12	True	AATAAA	-16	NA	4055952	4184822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4056181_4056246_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.4	chr15	+	2070	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	93	1364	93	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACATTTTATTGTGGT	NA	False	NA	NA	False	NA	NA	NA	4055957	4183462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.6	chr15	+	3577	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.0493055519593	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACGAATGTGTGTGTC	NA	False	NA	10	True	AATAAA	-14	NA	4056153	4184820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123937_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.7	chr15	+	2834	18	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	65.4783304972407	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTGTGTGTCCTCTT	NA	False	NA	15	True	AATAAA	-19	NA	4056154	4184825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209_4183323_4183724
ES.11463.8	chr15	+	3195	17	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.3827395832939	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGAATGTGTGTGTCCT	NA	False	NA	12	True	AATAAA	-16	NA	4056174	4184822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121910_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ES.11463.9	chr15	+	2734	18	NNC	ENSMUSG00000022186.15	novel	3527	17	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	65.4783304972407	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAATGTGTGTGTCCTC	NA	False	NA	13	True	AATAAA	-17	NA	4056181	4184823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209_4184012_4184484
ES.11464.1	chr15	-	4965	1	Intergenic	novelGene_9553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAACGCTGGAGAGATA	NA	False	NA	NA	False	NA	NA	NA	4119450	4114485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_4114500_4119400
ES.11465.1	chr15	+	3673	1	Intergenic	novelGene_9555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-44	NA	4189937	4193610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_4189900_4193600
ES.11466.1	chr15	-	173	1	Intergenic	novelGene_9556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTCCCTGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	4465201	4465028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_4465000_4465200
ES.11467.1	chr15	-	120	1	Intergenic	novelGene_9557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	5016662	5016542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5016500_5016700
ES.11468.1	chr15	+	2830	1	Intergenic	novelGene_9558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAGCTAAAAATTGT	NA	False	NA	NA	False	NA	NA	NA	5053386	5056216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5053400_5056200
ES.11469.1	chr15	+	5703	1	FSM	ENSMUSG00000065714.3	ENSMUST00000083780.3	103	1	-4445	-1155	-4445	1155	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	5060396	5066099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5060400_5066100
ES.1147.1	chr1	+	99	1	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTGCTTGAGAATGA	NA	False	NA	NA	False	NA	NA	NA	110848810	110848909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_110848800_110848900
ES.11470.1	chr15	-	178	1	Intergenic	novelGene_9559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAACTTTAGAC	NA	False	NA	NA	False	NA	NA	NA	5072208	5072030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5072000_5072200
ES.11471.1	chr15	+	177	1	Intergenic	novelGene_9560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	5132680	5132857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5132700_5132900
ES.11472.1	chr15	-	4642	4	NNC	ENSMUSG00000041849.8	novel	5995	4	NA	NA	-7905	-1462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTACTGATTTGTGTATG	NA	False	NA	NA	False	AATAAA	-20	NA	5145926	5126924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_5130578_5134384_5134919_5137569_5137859_5145760
ES.11472.2	chr15	-	4579	4	FSM	ENSMUSG00000041849.8	ENSMUST00000118365.3	5995	4	-48	1464	-48	-1464	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTACTGATTTGTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	5138069	5126926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_5130578_5134384_5134919_5137569_5137859_5137964
ES.11472.3	chr15	-	4564	4	NNC	ENSMUSG00000041849.8	novel	5995	4	NA	NA	-8	-1466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.29983164553722	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGGTACTGATTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	5138029	5126928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_5130576_5134384_5134919_5137569_5137888_5137964
ES.11472.4	chr15	-	1701	3	ISM	ENSMUSG00000041849.8	ENSMUST00000118365.3	5995	4	-50	8151	-50	1005	5prime_fragment	FALSE	canonical	0	0	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGATCTAGAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	5138071	5133613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_5134919_5137569_5137859_5137964
ES.11473.1	chr15	+	446	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-49	438	-49	25	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCGGTTCAGAGTTCGG	2199	False	NA	61	True	AATAAA	-42	NA	5146077	5148184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ES.11473.2	chr15	+	991	3	FSM	ENSMUSG00000041841.9	ENSMUST00000227635.2	925	3	-70	4	-21	-2	multi-exon	FALSE	canonical	3	15185	junction_2	4434.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2227	False	NA	32	True	AATAAA	-13	NA	5146105	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5146905_5147100_5147186_5148048
ES.11473.4	chr15	+	2029	1	FSM	ENSMUSG00000077737.3	ENSMUST00000104549.3	81	1	-1759	-189	-1759	189	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2248	False	NA	32	True	AATAAA	-13	NA	5146126	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5146100_5148200
ES.11473.5	chr15	+	1420	2	ISM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	5	469	5	-4	intron_retention	FALSE	canonical	3	16622	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAATTCTGTGGTGATC	2253	False	NA	30	True	AATAAA	-11	NA	5146131	5148153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_5146167_5146768
ES.11473.6	chr15	+	1213	3	ISM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	18	467	18	-2	intron_retention	FALSE	canonical	3	16622	junction_1	3716	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2266	False	NA	32	True	AATAAA	-13	NA	5146144	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_5146167_5146768_5146905_5147100
ES.11473.7	chr15	+	1140	2	NIC	ENSMUSG00000041841.9	novel	925	3	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	15185	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2274	False	NA	32	True	AATAAA	-13	NA	5146152	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5147186_5148048
ES.11473.8	chr15	+	582	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	-28	2	-21	-2	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2276	False	NA	32	True	AATAAA	-13	NA	5146154	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
ES.11473.9	chr15	+	561	4	NNC	ENSMUSG00000041841.9	novel	556	4	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	9909.82187304876	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGTGGTGATCTA	2278	False	NA	32	True	AATAAA	-13	NA	5146156	5148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5146390_5146768_5146905_5147100_5147186_5148048
ES.11474.1	chr15	-	1400	3	Genic_Genomic	ENSMUSG00000068706.4	novel	482	1	NA	NA	-14132	414	multi-exon	FALSE	canonical	0	0	junction_2	0.5	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTTCATGCCCATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	5164749	5149721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_5150946_5164168_5164323_5164727
ES.11474.2	chr15	-	556	1	FSM	ENSMUSG00000068706.4	ENSMUST00000090488.4	482	1	-22	-52	-22	52	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAG	NA	False	NA	NA	False	NA	NA	NA	5150639	5150083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_5150100_5150600
ES.11474.3	chr15	-	202	1	Intergenic	novelGene_9561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAACATGCCCAATCAAA	NA	False	NA	NA	False	NA	NA	NA	5157800	5157598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5157600_5157800
ES.11474.4	chr15	-	173	1	Intergenic	novelGene_9562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5158682	5158509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5158500_5158700
ES.11475.1	chr15	+	1962	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	-218	2911	-218	-2904	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTCCACTTACCAAG	NA	False	NA	NA	False	AATAAA	-9	NA	5173124	5208469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.10	chr15	+	4170	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-8	-362	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTTTCTTAAGAT	NA	False	NA	9	True	AATAAA	-21	NA	5173364	5211011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.11	chr15	+	4264	10	NNC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-2	-446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.8383729904126	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACCAAGTCGGGAGACGC	NA	False	NA	-75	True	ATTAAA	-26	NA	5173370	5210927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5173478_5188705_5188796_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.12	chr15	+	4118	6	NNC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.3875764414223	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTATTTCTTATTTC	NA	False	NA	16	True	AATAAA	-25	NA	5173370	5211378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5173478_5190083_5190230_5203872_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.13	chr15	+	3512	5	NNC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-2	-452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.6637111793689	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCTACCAAGTCGGG	NA	False	NA	-81	True	ATTAAA	-20	NA	5173370	5210921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5173478_5203875_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.14	chr15	+	4035	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-1	-490	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTTTGCCATTAAAG	NA	False	NA	NA	False	AATATA	-19	NA	5173371	5210883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.15	chr15	+	5075	7	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	13092	-2963	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	48.6018403858217	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCTAAAATTTTGCTTA	743	False	NA	NA	False	ATTAAA	-13	NA	5186464	5208410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.16	chr15	+	4022	8	NNC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	19133	-369	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	55.3427170143517	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATTCTATTTTTTTC	6784	False	NA	2	True	AATAAA	-14	NA	5192505	5211004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5192526_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.17	chr15	+	4277	6	ISM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	24674	2	24674	-2	3prime_fragment	FALSE	canonical	3	154	junction_5	9.76524449258696	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTACACAGTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	5198046	5211371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.18	chr15	+	5361	4	ISM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	28999	0	28999	0	3prime_fragment	FALSE	canonical	3	154	junction_3	12.2836838484589	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5202371	5211373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.19	chr15	+	3814	1	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	34192	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTATTTCTTATTTC	NA	False	NA	16	True	AATAAA	-25	NA	5207564	5211378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5207600_5211400
ES.11475.2	chr15	+	4836	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	-181	0	-181	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATTTCTTATTTCAT	NA	False	NA	18	True	AATAAA	-27	NA	5173161	5211380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.3	chr15	+	4449	9	FSM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	-163	369	-163	-362	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTTTCTTAAGAT	NA	False	NA	9	True	AATAAA	-21	NA	5173179	5211011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.4	chr15	+	4548	8	NIC	ENSMUSG00000050697.10	novel	4618	9	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173348	5211373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.5	chr15	+	4151	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	13	-357	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	56.1513988413177	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTAAGATGCTTT	NA	False	NA	14	True	AATAAA	-26	NA	5173355	5211016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5208168
ES.11475.6	chr15	+	3736	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-14	-802	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACTATTGCAGTCAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	5173358	5210571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.7	chr15	+	4279	9	NNC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-10	-369	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	52.736224504604	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATTCTATTTTTTTC	NA	False	NA	2	True	AATAAA	-14	NA	5173362	5211004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5173478_5190083_5190226_5194172_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.8	chr15	+	1572	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-10	-2962	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAAAATTTTGCTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	5173362	5208411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11475.9	chr15	+	4359	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	-9	-174	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCCTCCCTCTGCCTG	NA	False	NA	NA	False	CATAAA	-10	NA	5173363	5211199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ES.11476.1	chr15	-	160	1	Intergenic	novelGene_9563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	5181156	5180996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5181000_5181200
ES.11477.1	chr15	-	8556	8	Intergenic	novelGene_9564	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGGAAAAGATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	5208611	5183284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5190224_5194189_5194286_5198047_5198193_5199408_5199504_5203692_5203912_5205964_5206452_5206557_5206686_5208164
ES.11478.1	chr15	+	3984	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	-338	-1975	-338	1975	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTTCTGGTTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	5214667	5249792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.10	chr15	+	1382	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	177	273	10	-273	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGATGTATGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	5215217	5247544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.11	chr15	+	3600	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4019	-1974	2225	1974	3prime_fragment	FALSE	canonical	3	119	junction_1	10.4986771653491	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTGTTCTGGTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	5219059	5249791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.12	chr15	+	3396	1	Intergenic	novelGene_9565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCATTCTGTTTATG	6194	False	NA	NA	False	NA	NA	NA	5248305	5251701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5248300_5251700
ES.11478.13	chr15	+	6151	2	Antisense	novelGene_ENSMUSG00000039942.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTTCCTTCTCTCTGT	8552	False	NA	NA	False	TTTAAA	-21	NA	5250663	5258365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_5255036_5256586
ES.11478.14	chr15	+	2207	1	Intergenic	novelGene_9566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGACTCTCAAATTC	NA	False	NA	NA	False	AATAAA	-25	NA	5257295	5259502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5257300_5259500
ES.11478.2	chr15	+	1661	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	4	6	4	-6	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTCTTTCCTTTT	NA	False	NA	25	True	AGTAAA	-25	NA	5215009	5247811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.3	chr15	+	1845	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-19	6	16	-6	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTCTTTCCTTTT	NA	False	NA	25	True	AGTAAA	-25	NA	5215021	5247811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.4	chr15	+	3826	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-19	-1975	16	1975	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTTCTGGTTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	5215021	5249792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.5	chr15	+	1425	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	-14	421	-14	-421	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTGTTGTCATTCT	NA	False	NA	NA	False	GATAAA	-29	NA	5215026	5247396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.6	chr15	+	5641	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	23	-3993	-12	3993	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCAAAGTTTGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	5215028	5251810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.7	chr15	+	3518	6	NNC	ENSMUSG00000022151.17	novel	1671	5	NA	NA	-6	1972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.9842835088563	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTGTGTTGTTCTGGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5215034	5249789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630_5248495_5248590
ES.11478.8	chr15	+	4430	5	FSM	ENSMUSG00000022151.17	ENSMUST00000144653.8	727	5	-596	-3107	2	1975	multi-exon	FALSE	canonical	0	0	junction_1	58.5891414854323	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTTCTGGTTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	5215042	5249792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215875_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11478.9	chr15	+	2674	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	152	-994	-15	994	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGATGGTATTTTTGA	NA	False	NA	NA	False	TATAAA	-16	NA	5215192	5248811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ES.11479.1	chr15	-	5713	1	Antisense	novelGene_ENSMUSG00000022151.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAT	NA	False	NA	NA	False	AAGAAA	-4	NA	5223779	5218066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_5218100_5223800
ES.1148.1	chr1	-	226	1	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCTTAGAGCCTGAAAC	NA	False	NA	NA	False	NA	NA	NA	111220439	111220213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_111220200_111220400
ES.11480.1	chr15	-	3357	3	FSM	ENSMUSG00000039942.16	ENSMUST00000120563.2	3312	3	-46	1	-31	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAGTCTCAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	5273699	5262880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_5264704_5271741_5272677_5273100
ES.11481.1	chr15	+	168	1	Intergenic	novelGene_9567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATCTGCCAA	8028	False	NA	NA	False	NA	NA	NA	5274888	5275056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5274900_5275100
ES.11482.1	chr15	+	179	1	Intergenic	novelGene_9568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	5279289	5279468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_5279300_5279500
ES.11483.1	chr15	-	133	1	Intergenic	novelGene_9569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5953369	5953236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_5953200_5953400
ES.11484.1	chr15	+	511	4	Intergenic	novelGene_9570	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAAAAATCTGTCGCCT	NA	False	NA	NA	False	TATAAA	-15	NA	6063882	6077910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_6063976_6075831_6076076_6076425_6076490_6077800
ES.11484.2	chr15	+	2477	2	Intergenic	novelGene_9571	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGCAAATACCATGTT	NA	False	NA	NA	False	AATAAA	-36	NA	6063892	6078225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_6063976_6075831
ES.11484.3	chr15	+	5867	1	Intergenic	novelGene_9572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAATGTCTTTTGCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	6076149	6082016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_6076100_6082000
ES.11485.1	chr15	-	3640	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTGTTGTATTATCT	NA	False	NA	NA	False	NA	NA	NA	6074122	6054170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6057514_6073729_6073988_6074083
ES.11485.2	chr15	-	1439	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGGTGTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	6074122	6054173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6055316_6073729_6073988_6074083
ES.11485.3	chr15	-	1419	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGGTGTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	6074122	6054173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6055316_6073729_6073968_6074083
ES.11485.4	chr15	-	3187	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCGAACTCATATACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	6074123	6054624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6057514_6073729_6073988_6074083
ES.11485.5	chr15	-	1122	2	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATGGTCTGGTCAGT	NA	False	NA	NA	False	AATAAA	-10	NA	6074053	6056715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6057514_6073729
ES.11485.6	chr15	-	2783	1	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAACATATTTG	NA	False	NA	NA	False	AATAAA	-8	NA	6065359	6062576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6062600_6065400
ES.11486.1	chr15	+	904	1	Intergenic	novelGene_9573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATGGCCTATTTCTGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	6082081	6082985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_6082100_6083000
ES.11487.1	chr15	+	223	1	Intergenic	novelGene_9574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTCAGTAGTTTG	NA	False	NA	NA	False	NA	NA	NA	6163717	6163940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_6163700_6163900
ES.11488.1	chr15	+	3132	14	FSM	ENSMUSG00000022150.17	ENSMUST00000110663.9	2754	14	-355	-23	-177	3	multi-exon	FALSE	canonical	3	5	junction_9	3.86610211480894	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGGCTGTTCCATTTTC	7937	False	NA	NA	False	AATAAA	-36	NA	6415901	6469132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.2	chr15	+	3666	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	-78	1075	-78	2	multi-exon	FALSE	canonical	2	3	junction_9	4.17230910471721	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTGATCTCTCCCAG	8036	False	NA	NA	False	AATAAA	-15	NA	6416000	6469111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.3	chr15	+	2899	13	FSM	ENSMUSG00000022150.17	ENSMUST00000161812.8	2710	13	-221	32	-42	-12	multi-exon	FALSE	canonical	0	0	junction_8	4.76678321535836	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATTTCTCTCATTCTG	8072	False	NA	NA	False	AATAAA	-36	NA	6416036	6469097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.4	chr15	+	4633	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	37	-7	37	0	multi-exon	FALSE	canonical	2	3	junction_9	4.17230910471721	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCGCTGTTAGCTC	8151	False	NA	NA	False	AATAAA	-16	NA	6416115	6470193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.5	chr15	+	3876	13	FSM	ENSMUSG00000022150.17	ENSMUST00000161812.8	2710	13	-99	-1067	-70	3	multi-exon	FALSE	canonical	0	0	junction_8	4.76678321535836	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCGCTGTTAGCTCATT	8194	False	NA	NA	False	AATAAA	-19	NA	6416158	6470196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.6	chr15	+	4488	14	FSM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	-31	-7	-31	0	multi-exon	FALSE	canonical	0	0	junction_8	4.6651166769404	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCGCTGTTAGCTC	8233	False	NA	NA	False	AATAAA	-16	NA	6416197	6470193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11488.7	chr15	+	1245	10	NIC	ENSMUSG00000022150.17	novel	1374	10	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	5.71115434484284	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTCTTTCTTGTGATGA	8233	False	NA	NA	False	ATTAAA	-13	NA	6416197	6457245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6457001
ES.11488.8	chr15	+	2751	15	NNC	ENSMUSG00000022150.17	novel	4663	15	NA	NA	90	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.04110072413825	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAAGTATAAT	8385	False	NA	NA	False	AATAAA	-23	NA	6416349	6469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6416414_6418530_6418646_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ES.11489.1	chr15	-	167	1	Intergenic	novelGene_9575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAAGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	6482987	6482820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_6482800_6483000
ES.1149.1	chr1	+	169	1	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111478218	111478387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_111478200_111478400
ES.11490.1	chr15	-	162	1	Intergenic	novelGene_9576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAATATTT	8293	False	NA	NA	False	NA	NA	NA	6572793	6572631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_6572600_6572800
ES.11491.1	chr15	-	4109	1	Antisense	novelGene_ENSMUSG00000022148.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCACTACCTTCACTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	6616727	6612618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6612600_6616700
ES.11492.1	chr15	-	2977	1	Intergenic	novelGene_9577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGCCTGTGGTATAGTG	NA	False	NA	NA	False	NA	NA	NA	6632155	6629178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_6629200_6632200
ES.11493.1	chr15	+	1030	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-66	-145	-66	145	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTATTCCAGAAAGAT	NA	False	NA	NA	False	AATAAA	-39	NA	6683337	6684367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6683300_6684400
ES.11494.1	chr15	+	7922	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	-146	1536	-142	-1536	multi-exon	TRUE	canonical	3	15	junction_28	25.9902212323754	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTCTAAAATGTCTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	6737717	6828346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.10	chr15	+	7837	39	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	4	-1543	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	27.7495227180637	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATAGGCTCTAAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	6737867	6828339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.11	chr15	+	9376	39	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	27.7495227180637	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6737871	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.12	chr15	+	1324	7	FSM	ENSMUSG00000050310.10	ENSMUST00000226201.2	2633	7	10	1299	8	-1299	multi-exon	FALSE	canonical	3	76	junction_1	4.31083905212585	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGAGCCACTCTA	NA	False	NA	NA	False	AATAAA	-18	NA	6737871	6786797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941
ES.11494.13	chr15	+	6405	39	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	8	-2971	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	27.7495227180637	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTAGACTGCTTACGCG	NA	False	NA	NA	False	ATTAAA	-39	NA	6737871	6826911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.14	chr15	+	699	8	FSM	ENSMUSG00000050310.10	ENSMUST00000226181.2	4695	8	10	3986	8	976	multi-exon	FALSE	canonical	3	60	junction_7	8.20900451346208	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTGCACCTTCTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	6737871	6789072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968
ES.11494.15	chr15	+	9218	37	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	29.4591551302418	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6738114	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6785973_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.16	chr15	+	5079	33	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	37081	-5464	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	28.3590263408319	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTAGATTTCTCAATG	NA	False	NA	NA	False	NA	NA	NA	6774944	6824418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925
ES.11494.17	chr15	+	12077	27	NIC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	56125	0	intron_retention	FALSE	canonical	3	15	junction_17	29.3283038766994	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6793988	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_6797618_6798726_6798815_6799225_6799317_6799408_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.19	chr15	+	6795	13	ISM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	73272	0	73272	0	3prime_fragment	FALSE	canonical	3	15	junction_3	16.4612339216179	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6811135	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.2	chr15	+	6338	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	-11	2985	-7	-2985	multi-exon	FALSE	canonical	3	15	junction_28	25.9902212323754	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCATGAACATCATTACT	NA	False	NA	NA	False	ATTAAA	-25	NA	6737852	6826897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.20	chr15	+	6682	12	ISM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	73779	3	73779	-3	3prime_fragment	FALSE	canonical	3	15	junction_2	7.68813618613308	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	3	True	AATAAA	-18	NA	6811642	6829879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.21	chr15	+	5232	8	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	79266	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	8.34461820943442	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6817129	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.22	chr15	+	5162	7	ISM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	81045	0	81045	0	3prime_fragment	FALSE	canonical	3	26	junction_1	4.49691252107735	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6818908	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.23	chr15	+	2468	1	NIC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	84087	-5464	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTAGATTTCTCAATG	NA	False	NA	NA	False	NA	NA	NA	6821950	6824418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_6822000_6824400
ES.11494.24	chr15	+	4504	3	ISM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	86061	0	86061	0	3prime_fragment	FALSE	canonical	3	29	junction_1	1.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6823924	6829882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_6824050_6825376_6825516_6825642
ES.11494.25	chr15	+	5274	1	NIC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	86742	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	3	True	AATAAA	-18	NA	6824605	6829879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_6824600_6829900
ES.11494.3	chr15	+	9323	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	-10	-1	-6	1	multi-exon	FALSE	canonical	3	15	junction_28	25.9902212323754	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTGTTGACATTA	NA	False	NA	7	True	AATAAA	-22	NA	6737853	6829883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.4	chr15	+	9355	38	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	27.3566387368821	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	3	True	AATAAA	-18	NA	6737859	6829879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820148_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.5	chr15	+	7813	38	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	1	-1542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	27.3566387368821	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATAGGCTCTAAAATG	NA	False	NA	NA	False	AATAAA	-25	NA	6737862	6828340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820148_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.7	chr15	+	9195	38	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	27.3566387368821	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGTGGTGGTGTTGA	NA	False	NA	2	True	AATAAA	-17	NA	6737862	6829878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821187_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11494.8	chr15	+	1672	16	ISM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	-1	27918	1	7066	5prime_fragment	FALSE	canonical	3	58	junction_8	10.1552394796425	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGAAAGGTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	6737862	6801964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612
ES.11494.9	chr15	+	11544	37	NNC	ENSMUSG00000050310.10	novel	9312	38	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_16	27.8889442230527	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGGTGGTGTTGAC	NA	False	NA	3	True	AATAAA	-18	NA	6737866	6829879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803265_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ES.11495.1	chr15	-	4856	1	Intergenic	novelGene_9578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCATGCTTGCTATGGAA	NA	False	NA	NA	False	NA	NA	NA	6746516	6741660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_6741700_6746500
ES.11496.1	chr15	-	1242	3	Antisense	novelGene_ENSMUSG00000050310.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCTATAGTCCTGTCA	NA	False	NA	NA	False	AATAAA	-23	NA	6776164	6769864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6770686_6771862_6772037_6775917
ES.11497.1	chr15	-	2881	2	Antisense	novelGene_ENSMUSG00000050310.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAAAACAAAA	8399	False	NA	NA	False	NA	NA	NA	6823467	6820543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6821697_6821739
ES.11497.2	chr15	-	1577	3	Antisense	novelGene_ENSMUSG00000050310.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAACAAAACAA	7285	False	NA	NA	False	NA	NA	NA	6824581	6820545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_6821307_6823453_6823613_6823924
ES.11498.1	chr15	-	177	1	Intergenic	novelGene_9579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	7089696	7089519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_7089500_7089700
ES.11499.1	chr15	+	6486	22	NNC	ENSMUSG00000054263.13	novel	4143	20	NA	NA	-35	2415	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	10.5211157940126	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGGCTTTTTGAGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	7159004	7223639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026_7222198_7222263_7222810_7222850
ES.11499.10	chr15	+	4462	19	ISM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	34	-1	21	1	intron_retention	FALSE	canonical	3	17	junction_15	6.45401588064782	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGGTTATCAAACAGTT	NA	False	NA	NA	False	GATAAA	-26	NA	7159073	7221225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595
ES.11499.2	chr15	+	9896	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	-8	-5745	-8	-1	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTTGGACATTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	7159031	7226969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ES.11499.3	chr15	+	5902	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	-8	-1751	-8	1751	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	7159031	7222975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ES.11499.5	chr15	+	4138	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	7	-2	-1	2	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGTTATCAAACAGTTG	NA	False	NA	NA	False	GATAAA	-27	NA	7159046	7221226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ES.11499.6	chr15	+	3866	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	10	267	2	258	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTTTTCTGTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	7159049	7220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ES.11499.7	chr15	+	9764	22	NNC	ENSMUSG00000054263.13	novel	4143	20	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	10.5211157940126	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGTAAATTTGGACATT	NA	False	NA	NA	False	AATAAA	-20	NA	7159052	7226965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026_7222198_7222263_7222810_7222850
ES.11499.8	chr15	+	2701	16	NIC	ENSMUSG00000054263.13	novel	2844	17	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.17964954424495	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACATGCGGCACAGGTT	NA	False	NA	NA	False	NA	NA	NA	7159055	7214822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
ES.11499.9	chr15	+	3609	1	NIC	ENSMUSG00000054263.13	novel	4143	20	NA	NA	20	547	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAATCTTGCCTGAT	NA	False	NA	NA	False	AATAAA	-11	NA	7159072	7162681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_7159100_7162700
ES.115.1	chr1	+	163	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13188445	13188608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13188400_13188600
ES.1150.1	chr1	-	5701	3	NIC	ENSMUSG00000038702.7	novel	622	2	NA	NA	1	103	intron_retention	FALSE	canonical	3	7	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTTTGTTTCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	111792647	111786328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_111791371_111791824_111791962_111792125
ES.1150.2	chr1	-	6217	1	Genic_Genomic	ENSMUSG00000038702.7	novel	NA	NA	NA	NA	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTATAGTGTTTATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	111792647	111786430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_111786400_111792600
ES.1150.3	chr1	-	5791	2	FSM	ENSMUSG00000038702.7	ENSMUST00000035462.7	5759	2	-32	0	-32	0	multi-exon	FALSE	canonical	3	14	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTGTATAGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	111792680	111786435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_111791371_111791824
ES.1150.4	chr1	-	5571	3	NIC	ENSMUSG00000038702.7	novel	622	2	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	7	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACGTTGTATAGTGT	NA	False	NA	NA	False	AATAAA	-12	NA	111792626	111786437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_111791371_111791824_111791962_111792125
ES.1150.5	chr1	-	5544	4	NNC	ENSMUSG00000038702.7	novel	622	2	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	5.71547606649408	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACGTTGTATAGTGT	NA	False	NA	NA	False	AATAAA	-12	NA	111792647	111786437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_111787455_111787502_111791371_111791824_111791962_111792125
ES.11500.1	chr15	-	4687	1	Antisense	novelGene_ENSMUSG00000054263.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGGCCTTAGTCCT	NA	False	NA	NA	False	NA	NA	NA	7227661	7222974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_7223000_7227700
ES.11501.1	chr15	-	4231	22	FSM	ENSMUSG00000042961.14	ENSMUST00000058593.10	4778	22	17	530	17	-67	multi-exon	TRUE	canonical	0	0	junction_2	0.65291948575248	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGGTCATTACCGTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	7427768	7236130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_7237284_7237982_7238087_7241611_7241696_7249105_7249250_7252228_7252308_7261068_7261250_7263665_7263783_7267217_7267330_7271882_7272127_7273263_7273390_7276480_7276671_7279510_7279656_7280674_7280776_7281886_7281988_7282908_7283228_7283909_7284026_7319264_7319432_7333405_7333542_7334582_7334701_7345879_7345964_7347721_7347832_7427468
ES.11502.1	chr15	+	177	1	Intergenic	novelGene_9580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	7657919	7658096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_7657900_7658100
ES.11503.1	chr15	+	111	1	FSM	ENSMUSG00000115497.2	ENSMUST00000228223.2	279	1	150	18	150	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGCAAAAAAAAAAAATA	NA	False	NA	-12	True	AGTAAA	-10	NA	7790344	7790455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_7790300_7790500
ES.11504.1	chr15	+	4778	1	Intergenic	novelGene_9581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCACTGTGGGTGGC	NA	False	NA	NA	False	AATAAA	-37	NA	7919250	7924028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_7919200_7924000
ES.11505.1	chr15	+	2088	1	Intergenic	novelGene_9582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTCATTTCAAAGAGAG	7577	False	NA	NA	False	NA	NA	NA	7982639	7984727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_7982600_7984700
ES.11506.1	chr15	+	2751	8	Antisense	novelGene_ENSMUSG00000039828.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8006527	8121410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_8006624_8049069_8049146_8065210_8065366_8072191_8072324_8075910_8075973_8108643_8108845_8111941_8112069_8119508
ES.11506.2	chr15	+	260	1	Intergenic	novelGene_9583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCCTCTTATTTAATAA	NA	False	NA	NA	False	NA	NA	NA	8036211	8036471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8036200_8036500
ES.11506.3	chr15	+	181	1	Intergenic	novelGene_9584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAATACTTCAAGTC	NA	False	NA	NA	False	NA	NA	NA	8050536	8050717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8050500_8050700
ES.11506.4	chr15	+	1616	1	Intergenic	novelGene_9585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	8073288	8074904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8073300_8074900
ES.11506.5	chr15	+	208	1	Intergenic	novelGene_9586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATGGCCAAAACATC	NA	False	NA	NA	False	NA	NA	NA	8074344	8074552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8074300_8074600
ES.11506.6	chr15	+	642	1	Intergenic	novelGene_9587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAACAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-41	NA	8089672	8090314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8089700_8090300
ES.11506.7	chr15	+	152	2	Antisense	novelGene_ENSMUSG00000039828.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGGAATGTGCTC	NA	False	NA	NA	False	AATAAA	-7	NA	8098013	8098332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_8098082_8098248
ES.11506.8	chr15	+	3420	2	Antisense	novelGene_ENSMUSG00000039828.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTCCTATGTTTTG	63	False	NA	NA	False	NA	NA	NA	8103080	8106777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_8104241_8104517
ES.11506.9	chr15	+	182	1	Intergenic	novelGene_9589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTAAAAATTTT	1988	False	NA	NA	False	NA	NA	NA	8115661	8115843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8115700_8115800
ES.11507.1	chr15	+	4708	36	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-6920	862	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	55.8216986557766	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTGCCAAATGATTTA	NA	False	NA	86	True	AATGAA	-21	NA	8131836	8187382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8132062_8138756_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.10	chr15	+	4480	36	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-7	794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.7314732910967	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8138812	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149407_8149529_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.11	chr15	+	4260	34	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-6	789	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	56.916174083998	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCAGGTGTTGTATAT	NA	False	NA	13	True	AATAAA	-16	NA	8138813	8187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.14	chr15	+	3153	20	ISM	ENSMUSG00000022142.9	ENSMUST00000230017.2	4391	34	-5	18236	-5	3866	5prime_fragment	FALSE	canonical	3	205	junction_4	24.3576763853198	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTTCTTTGGGGTTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	8138814	8168284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337
ES.11507.15	chr15	+	7775	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	59	-2	-4	2	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGTTTGTATACTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	8138815	8190733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.17	chr15	+	7098	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	61	673	-2	-673	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACATCTTGAGAAAGTG	NA	False	NA	NA	False	AATGAA	-12	NA	8138817	8190058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.19	chr15	+	6290	33	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	5	1032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.5471274261366	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTGTGTTTCCAT	NA	False	NA	9	True	AATGAA	-19	NA	8138824	8189340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8145828_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.2	chr15	+	7486	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	30	316	30	-316	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTGAAAGAGATTAGT	NA	False	NA	10	True	AATAAA	-23	NA	8138786	8190415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.20	chr15	+	4343	35	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	11	790	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	56.636498007684	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAGGTGTTGTATATC	NA	False	NA	14	True	AATAAA	-17	NA	8138830	8187310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176787_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.21	chr15	+	4328	35	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	12	789	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_34	55.1006392869174	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCAGGTGTTGTATAT	NA	False	NA	13	True	AATAAA	-16	NA	8138831	8187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186270_8187109
ES.11507.22	chr15	+	4493	36	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	12	794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.0320465120422	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8138831	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143229_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170849_8172451_8172644_8173259_8173404_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.24	chr15	+	6507	36	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	15	1032	combination_of_known_junctions	FALSE	canonical	1	1	junction_24	68.9228850356154	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTGTGTTTCCAT	NA	False	NA	9	True	AATGAA	-19	NA	8138834	8189340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173259_8173404_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.26	chr15	+	5522	35	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	16	199	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_34	55.1006392869174	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGACAAAAAAACCTGAGA	NA	False	NA	NA	False	ACTAAA	-23	NA	8138835	8188507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186270_8187109
ES.11507.27	chr15	+	5095	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	79	2658	16	-235	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAATGGTGCTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	8138835	8188073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.28	chr15	+	7085	34	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	17	1029	intron_retention	FALSE	canonical	3	205	junction_4	36.1499021713371	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATCTAGTTGTGTTTC	NA	False	NA	6	True	AATGAA	-16	NA	8138836	8189337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.3	chr15	+	4336	35	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-29	794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	66.2652737502103	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8138790	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181288_8182618_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187112
ES.11507.30	chr15	+	4602	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	91	3139	28	-716	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTGACTTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	8138847	8187592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.32	chr15	+	5044	34	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	35	794	intron_retention	FALSE	canonical	3	205	junction_4	36.1499021713371	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8138854	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.37	chr15	+	4488	35	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	36	791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	55.7230236376473	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGTGTTGTATATCT	NA	False	NA	15	True	AATAAA	-18	NA	8138855	8187311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8182948_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.38	chr15	+	4432	33	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	36	-714	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	57.6089999479248	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGACTTTGTATTATT	NA	False	NA	NA	False	NA	NA	NA	8138855	8187594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.4	chr15	+	6276	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	36	1520	-27	903	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCACTACCTCGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	8138792	8189211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.40	chr15	+	4091	34	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	61	786	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	56.959509082603	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAATCAGGTGTTGTA	NA	False	NA	10	True	AATAAA	-13	NA	8138880	8187306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.41	chr15	+	5920	31	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	4948	789	intron_retention	FALSE	canonical	3	214	junction_15	36.0929202045067	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCAGGTGTTGTATAT	NA	False	NA	13	True	AATAAA	-16	NA	8143767	8187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.42	chr15	+	5649	32	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	6205	1619	6142	804	3prime_fragment	FALSE	canonical	3	205	junction_1	36.9243961382837	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGATTACGGATTTCT	NA	False	NA	NA	False	AATATA	-18	NA	8144961	8189112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.43	chr15	+	3499	29	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	8657	791	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.2963173478486	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGTGTTGTATATCT	NA	False	NA	15	True	AATAAA	-18	NA	8147476	8187311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8147566_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.44	chr15	+	5440	28	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	9905	1391	9842	1032	3prime_fragment	FALSE	canonical	3	214	junction_12	37.5598653382166	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTGTGTTTCCAT	NA	False	NA	9	True	AATGAA	-19	NA	8148661	8189340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.45	chr15	+	3203	26	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-9667	794	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	64.287155793362	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8149914	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.46	chr15	+	5273	26	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	12188	1393	-8637	1030	3prime_fragment	FALSE	canonical	3	214	junction_10	38.1144801879811	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTAGTTGTGTTTCC	NA	False	NA	7	True	AATGAA	-17	NA	8150944	8189338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.47	chr15	+	5176	25	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	12780	1393	-8045	1030	3prime_fragment	FALSE	canonical	3	214	junction_9	38.8189350990238	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTAGTTGTGTTTCC	NA	False	NA	7	True	AATGAA	-17	NA	8151536	8189338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.48	chr15	+	2907	24	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-5857	794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	66.7205327436991	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8153724	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172651_8173612_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.49	chr15	+	3191	24	NNC	ENSMUSG00000022142.9	novel	2419	6	NA	NA	-2138	789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.7928264375454	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCAGGTGTTGTATAT	NA	False	NA	13	True	AATAAA	-16	NA	8157443	8187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8157745_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.5	chr15	+	6454	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	39	1339	-24	1084	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTAAGCGTGTTTAC	NA	False	NA	61	True	NA	NA	NA	8138795	8189392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.50	chr15	+	5141	24	NNC	ENSMUSG00000022142.9	novel	2419	6	NA	NA	-2056	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.7928264375454	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	10	True	AATGAA	-20	NA	8157525	8189341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8157745_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.51	chr15	+	4926	23	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	19133	1388	-1692	1035	3prime_fragment	FALSE	canonical	3	214	junction_7	38.6173482618481	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTGTTTCCATTTC	NA	False	NA	12	True	AATGAA	-22	NA	8157889	8189343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.52	chr15	+	4784	22	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-1690	1031	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	69.7767089768947	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTAGTTGTGTTTCCA	NA	False	NA	8	True	AATGAA	-18	NA	8157891	8189339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.53	chr15	+	2701	22	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	42	794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.9333043855779	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTTGTATATCTAAG	NA	False	NA	18	True	AATAAA	-21	NA	8159623	8187314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8159720_8160945_8161041_8163558_8163640_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.54	chr15	+	3106	15	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	5374	791	intron_retention	FALSE	canonical	0	0	junction_3	105.785810745591	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGTGTTGTATATCT	NA	False	NA	15	True	AATAAA	-18	NA	8164955	8187311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8166184_8167337_8167454_8169334_8169433_8172451_8172644_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.55	chr15	+	4201	17	NIC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	5660	1033	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	77.7483922663356	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	10	True	AATGAA	-20	NA	8165241	8189341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.57	chr15	+	4550	17	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	6405	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.8927570955158	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	10	True	AATGAA	-20	NA	8165986	8189341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8182948_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.58	chr15	+	3837	13	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	33693	1388	-80	1035	3prime_fragment	FALSE	canonical	3	241	junction_2	32.7145694692068	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTGTTTCCATTTC	3363	False	NA	12	True	AATGAA	-22	NA	8172449	8189343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.59	chr15	+	3571	10	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	37914	1141	-3896	-1141	3prime_fragment	FALSE	canonical	3	250	junction_1	32.1401253003312	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTAAACACACTCTCCT	7584	False	NA	NA	False	ATTAAA	-18	NA	8176670	8189590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.60	chr15	+	1139	8	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	38959	3423	-2851	788	3prime_fragment	FALSE	canonical	3	256	junction_2	30.3879675435619	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATCAGGTGTTGTATA	8629	False	NA	12	True	AATAAA	-15	NA	8177715	8187308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.61	chr15	+	4241	8	ISM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	38959	321	-2851	-321	3prime_fragment	FALSE	canonical	3	256	junction_2	30.3879675435619	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTTTTTTGAAAGAGA	8629	False	NA	5	True	AATAAA	-18	NA	8177715	8190410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.62	chr15	+	1287	4	NIC	ENSMUSG00000022142.9	novel	2419	6	NA	NA	-434	789	intron_retention	FALSE	canonical	3	301	junction_2	4.64279609239471	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCAGGTGTTGTATAT	NA	False	NA	13	True	AATAAA	-16	NA	8182391	8187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.63	chr15	+	2710	5	ISM	ENSMUSG00000022142.9	ENSMUST00000230925.2	2419	6	2031	-1033	-228	1033	3prime_fragment	FALSE	canonical	3	301	junction_3	4.27200187265877	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTAGTTGTGTTTCCATT	NA	False	NA	10	True	AATGAA	-20	NA	8182597	8189341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.7	chr15	+	5307	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	56	2469	-7	-46	multi-exon	FALSE	canonical	3	205	junction_4	36.1069753346922	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTGGCTCTCTGGTC	NA	False	NA	NA	False	ATTAAA	-10	NA	8138812	8188262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ES.11507.9	chr15	+	4354	36	NNC	ENSMUSG00000022142.9	novel	7832	35	NA	NA	-7	-835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	55.8216986557766	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTATAGTGTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	8138812	8187473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109_8187297_8187460
ES.11508.1	chr15	-	2384	19	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	-10091	1	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_18	99.2611594621873	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTTTCTGTTATGGA	NA	False	NA	2	True	AATAAA	-22	NA	8138784	7902534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602_8128877_8138735
ES.11508.12	chr15	-	3173	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.235016647826	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAACAGATTTTGTCCTT	NA	False	NA	-9	True	AATAAA	-11	NA	8128684	7902545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7912628_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.13	chr15	-	2418	7	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	5	50854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.839312310394	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGAACTTATTACCTAT	NA	False	NA	NA	False	NA	NA	NA	8128670	8070856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8072622_8075771_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.14	chr15	-	9494	3	Genic_Genomic	ENSMUSG00000039828.8	novel	2126	18	NA	NA	19426	22444	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8109249	8099266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_8104246_8104522_8106576_8106787
ES.11508.15	chr15	-	206	1	Intergenic	novelGene_9588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8115559	8115353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8115400_8115600
ES.11508.16	chr15	-	3968	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	20	-2858	2	2858	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGTAAGATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	8128673	8118852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ES.11508.17	chr15	-	1747	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	-8	-609	-8	609	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTACCCCTCTTCCGTT	NA	False	NA	40	True	NA	NA	NA	8128701	8121101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ES.11508.19	chr15	-	1375	5	NNC	ENSMUSG00000039828.8	novel	1130	4	NA	NA	-10108	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	184.472897738394	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTGCATTATTCAGC	NA	False	NA	NA	False	NA	NA	NA	8138801	8121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602_8128877_8138735
ES.11508.2	chr15	-	5990	1	NIC	ENSMUSG00000039828.8	novel	1177	3	NA	NA	7331	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTCCTTTCTGTTAT	NA	False	NA	-1	True	AATAAA	-19	NA	7908527	7902537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_7902500_7908500
ES.11508.20	chr15	-	285	2	Antisense	novelGene_ENSMUSG00000022142.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCATTGTGTCCTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	8138784	8133010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_8133247_8138735
ES.11508.21	chr15	-	4467	1	Intergenic	novelGene_9590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCAGGTGGAGGAATAG	NA	False	NA	NA	False	NA	NA	NA	8137997	8133530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8133500_8138000
ES.11508.22	chr15	-	324	1	Intergenic	novelGene_9591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTTTCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	8136037	8135713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8135700_8136000
ES.11508.3	chr15	-	3159	17	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	4	junction_13	104.286245947153	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTCCTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-18	NA	8128677	7902538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7913761_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.4	chr15	-	4088	17	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	3	3	intron_retention	FALSE	canonical	3	4	junction_13	103.466914246777	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCCTTTCTGTT	NA	False	NA	-3	True	AATAAA	-17	NA	8128672	7902539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.5	chr15	-	2029	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_14	101.173084758669	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128670	7902542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.6	chr15	-	4189	17	NIC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	158	junction_1	89.7106459680232	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128684	7902542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11508.8	chr15	-	3332	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.343407263881	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128672	7902542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_7902735_7913761_7913925_7915043_7916370_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ES.11509.1	chr15	-	344	1	Intergenic	novelGene_9592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTACA	NA	False	NA	NA	False	NA	NA	NA	8155780	8155436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8155400_8155800
ES.11509.2	chr15	-	235	1	Intergenic	novelGene_9593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTGGGAGAC	NA	False	NA	NA	False	NA	NA	NA	8155781	8155546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8155500_8155800
ES.1151.1	chr1	+	179	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111824482	111824661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_111824500_111824700
ES.11510.1	chr15	-	177	1	Intergenic	novelGene_9594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGGCCTGGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	8161847	8161670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8161700_8161800
ES.11511.1	chr15	-	1979	1	Antisense	novelGene_ENSMUSG00000022142.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	8190860	8188881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_8188900_8190900
ES.11512.1	chr15	+	10730	53	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-264	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_28	13.4246059301083	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198325	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251269_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.10	chr15	+	4562	22	ISM	ENSMUSG00000039801.8	ENSMUST00000110617.2	10469	53	-49	60850	-49	7702	5prime_fragment	FALSE	canonical	3	15	junction_2	6.49227693986829	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTGCTTGCTTGTTTA	NA	False	NA	NA	False	ATTAAA	-30	NA	8198540	8239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445
ES.11512.12	chr15	+	10439	54	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	15.3854938544824	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198557	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258110_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276652_8280460_8280549_8281643_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.14	chr15	+	7800	22	ISM	ENSMUSG00000039801.8	ENSMUST00000110617.2	10469	53	-32	57595	-32	-5068	intron_retention	FALSE	canonical	3	15	junction_2	6.49227693986829	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCTGATTTCTGGTAGC	NA	False	NA	NA	False	AATAAA	-18	NA	8198557	8243047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445
ES.11512.15	chr15	+	10492	52	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_45	13.6999762864723	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTCCTTGCCCACAGT	NA	False	NA	4	True	AATAAA	-11	NA	8198558	8300638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8289190_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.16	chr15	+	4175	19	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-31	-882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.1478271103586	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCGGGAGTCCGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	8198558	8231208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8199983_8200127_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617
ES.11512.17	chr15	+	5375	24	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-26	-5074	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	7.8552596373229	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGATGCTGATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	8198563	8243041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207933_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112
ES.11512.18	chr15	+	10419	52	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.3836861325232	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8198569	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8201176_8201306_8204209_8204402_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.19	chr15	+	10457	53	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	13.9945440552241	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8198569	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.2	chr15	+	10972	55	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-81	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	14.6876953625042	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8198508	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199078_8199179_8199789_8200127_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251269_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.20	chr15	+	10418	55	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.5282056744417	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198570	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8204789_8204886_8205602_8205836_8207820_8207933_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251269_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258543_8258710_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.21	chr15	+	3960	17	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-19	-882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.11643433585741	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCGGGAGTCCGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	8198570	8231208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204402_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617
ES.11512.24	chr15	+	10308	51	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.567429423203	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8198581	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281800_8289190_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.25	chr15	+	10542	53	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	15.4247912916361	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8198614	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199078_8199179_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207933_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281803_8289193_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.26	chr15	+	10289	52	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	14.3972582720334	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198633	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198947_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.27	chr15	+	8960	46	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-3952	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	14.4616308012651	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATCTGCTACTTCCTTG	NA	False	NA	-4	True	AATAAA	-3	NA	8211742	8300630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259560_8259588_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.28	chr15	+	207	1	Intergenic	novelGene_9596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCTAGGACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	8214207	8214414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8214200_8214400
ES.11512.29	chr15	+	4760	11	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	332	7685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.92468486838611	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATTGTGACAACTA	NA	False	NA	NA	False	ATTAAA	-13	NA	8216026	8239775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8235522_8239445
ES.11512.30	chr15	+	7664	43	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	1282	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	13.4570156365098	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8216976	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258543_8258710_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.31	chr15	+	2342	1	NIC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-8019	7685	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATTGTGACAACTA	NA	False	NA	NA	False	ATTAAA	-13	NA	8237433	8239775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8237400_8239800
ES.11512.32	chr15	+	6417	28	ISM	ENSMUSG00000039801.8	ENSMUST00000110617.2	10469	53	46571	0	-292	0	3prime_fragment	FALSE	canonical	2	15	junction_3	13.1045181163494	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8245160	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.33	chr15	+	5622	29	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	509	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.9778748390377	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8245961	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273774_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.34	chr15	+	5581	27	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	2461	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	15.6131108613636	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTCCTTGCCCACAGT	NA	False	NA	4	True	AATAAA	-11	NA	8247913	8300638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8289166_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.35	chr15	+	5160	28	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	2846	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	17.5991021095319	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8248298	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8248880_8250341_8250452_8251269_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273708_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281643_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.37	chr15	+	4254	24	NIC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-78	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	12.8983227467233	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTCCTTGCCCACAGTC	NA	False	NA	5	True	AATAAA	-12	NA	8252548	8300639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.39	chr15	+	3673	19	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	5762	-1	intron_retention	FALSE	canonical	0	0	junction_2	18.3398136695033	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8258388	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8258815_8259698_8259858_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273898_8274045_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.4	chr15	+	10413	55	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	16.1635163024405	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	False	NA	7	True	AATAAA	-14	NA	8198528	8300641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207933_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8246438_8246492_8247906_8248880_8250341_8250452_8251269_8251434_8251823_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258543_8258710_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.40	chr15	+	1523	7	NNC	ENSMUSG00000039801.8	novel	2153	2	NA	NA	-3790	-582	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.8959232426708	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGGTTGTGAGTTAAT	NA	False	NA	NA	False	ATTAAA	-35	NA	8272796	8281878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8273180_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632
ES.11512.41	chr15	+	9147	7	NIC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	8552	-2	intron_retention	FALSE	canonical	3	48	junction_5	6.8414585839246	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8285138	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8299282_8300162
ES.11512.42	chr15	+	3643	8	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	10311	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	20.9790955233917	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCCCACAGTCT	NA	False	NA	6	True	AATAAA	-13	NA	8286897	8300640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8287829_8289217_8289350_8290003_8290492_8290700_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.43	chr15	+	176	1	Intergenic	novelGene_9599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8290496	8290672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8290500_8290700
ES.11512.5	chr15	+	10690	55	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-55	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	14.7938393176291	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGTGTTTCCAGAAAC	NA	False	NA	20	True	AATAAA	-27	NA	8198534	8300654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198947_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245614_8245718_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.6	chr15	+	10697	55	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	14.3503224991602	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198535	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199078_8199179_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11512.8	chr15	+	10600	54	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-53	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	14.6146661147676	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTGTGTTTCCAGAAA	NA	False	NA	19	True	AATAAA	-26	NA	8198536	8300653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8254822_8254901_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271758_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293814_8293926_8299102_8299282_8300162
ES.11512.9	chr15	+	10350	54	NNC	ENSMUSG00000039801.8	novel	10469	53	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	13.9809156401143	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198536	8300642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_8198974_8199789_8199875_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258543_8258710_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ES.11513.1	chr15	-	158	1	Intergenic	novelGene_9595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	8205367	8205209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8205200_8205400
ES.11514.1	chr15	-	219	1	Intergenic	novelGene_9597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATCCTTAGTCAT	NA	False	NA	NA	False	NA	NA	NA	8227519	8227300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8227300_8227500
ES.11515.1	chr15	-	1036	1	Intergenic	novelGene_9598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGACCTGCAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	8265383	8264347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8264300_8265400
ES.11516.1	chr15	+	149	1	Intergenic	novelGene_9601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAACATTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	8416068	8416217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8416100_8416200
ES.11517.1	chr15	-	10370	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-149	-798	-149	798	multi-exon	TRUE	canonical	2	7	junction_43	23.7522658356028	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTACTTCCTATGTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	8474096	8319302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.10	chr15	-	9725	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-168	-134	-168	134	multi-exon	FALSE	canonical	2	7	junction_43	23.7522658356028	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGGCTGACTTCTGAA	NA	False	NA	NA	False	CATAAA	-18	NA	8474115	8319966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.11	chr15	-	7767	39	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	85742	134	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.550862515683	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGGCTGACTTCTGAA	9814	False	NA	NA	False	CATAAA	-18	NA	8388205	8319966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321579_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123
ES.11517.12	chr15	-	7086	38	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	93110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9617203025507	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGTTTCCATTTGAA	6242	False	NA	0	True	AATAAA	-22	NA	8380837	8320100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321586_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
ES.11517.14	chr15	-	9053	46	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	70392	0	70392	0	3prime_fragment	FALSE	canonical	2	7	junction_43	23.4544370489669	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGTTTCCATTTGAA	NA	False	NA	0	True	AATAAA	-22	NA	8403555	8320100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443
ES.11517.15	chr15	-	9612	47	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	-149	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_43	24.23853576966	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTGTTTCCATTTGA	NA	False	NA	-1	True	AATAAA	-21	NA	8474096	8320101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321579_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.17	chr15	-	9280	48	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	75	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_38	24.387359897506	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCTGTTTCCATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	8473872	8320102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8380524_8380589_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.18	chr15	-	6599	37	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	93414	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.6390853361226	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCTGTTTCCATTTG	6546	False	NA	-2	True	AATAAA	-20	NA	8380533	8320102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
ES.11517.19	chr15	-	4985	31	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	109541	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	20.832026625687	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCTGTTTCCATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	8364406	8320102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354122_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333
ES.11517.2	chr15	-	4852	18	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	120988	790	intron_retention	FALSE	canonical	3	42	junction_16	15.1504565007108	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCCGAGCTCTACTTC	8800	False	NA	NA	False	ATTAAA	-11	NA	8352959	8319310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892
ES.11517.20	chr15	-	6286	36	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	100965	-3	intron_retention	FALSE	canonical	3	23	junction_24	19.4561568871226	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTCTGTTTCCATTT	NA	False	NA	-3	True	AATAAA	-19	NA	8372982	8320103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958
ES.11517.21	chr15	-	9516	48	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	-162	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_38	24.387359897506	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTCTGTTTCCATTT	NA	False	NA	-3	True	AATAAA	-19	NA	8474109	8320103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8380530_8380595_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.22	chr15	-	4176	24	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	117364	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	24.5937886943847	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTCTGTTTCCATTT	5176	False	NA	-3	True	AATAAA	-19	NA	8356583	8320103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340630_8340766_8341817_8341927_8347846_8347894_8348956_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482
ES.11517.23	chr15	-	9287	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-130	266	-130	-266	multi-exon	FALSE	canonical	2	7	junction_43	23.7522658356028	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGGATGGCTTTCTTTA	NA	False	NA	1	True	AATAAA	-22	NA	8474077	8320366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.24	chr15	-	9275	48	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	-144	-267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	24.8266785050939	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCGGATGGCTTTCTTT	NA	False	NA	0	True	AATAAA	-21	NA	8474091	8320367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321579_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8380524_8380589_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.26	chr15	-	5653	26	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	93441	-268	intron_retention	FALSE	canonical	0	0	junction_21	21.9477925997126	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGCGGATGGCTTTCTT	6573	False	NA	-1	True	AATAAA	-20	NA	8380506	8320368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
ES.11517.28	chr15	-	9860	46	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	-162	-271	intron_retention	FALSE	canonical	2	7	junction_42	24.0098333764612	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCAGCGGATGGCTTT	NA	False	NA	-4	True	AATAAA	-17	NA	8474109	8320371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.33	chr15	-	7801	39	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	85697	-315	intron_retention	TRUE	non_canonical	0	0	junction_37	21.2381301376828	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGTCTGTTAATGTTC	9769	False	NA	-5	True	AATAAA	-15	NA	8388250	8320415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8380514_8380580_8381296_8388123
ES.11517.34	chr15	-	9104	46	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	-155	1020	-155	-1020	5prime_fragment	FALSE	canonical	2	7	junction_42	24.0098333764612	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGTAACACTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	8474102	8321120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.36	chr15	-	6855	37	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	92693	1160	92693	-1160	internal_fragment	FALSE	canonical	3	23	junction_24	19.3411542290935	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTTTTACAAGTATAC	5825	False	NA	NA	False	ATTAAA	-5	NA	8381254	8321260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
ES.11517.37	chr15	-	5315	37	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	94095	1298	94095	-1298	internal_fragment	FALSE	canonical	3	23	junction_24	19.3411542290935	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAATAATTTTTTGGAT	7227	False	NA	NA	False	AATAAA	-31	NA	8379852	8321398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687
ES.11517.38	chr15	-	4147	1	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	145485	-4215	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACCAAGTCAAATAATAT	NA	False	NA	NA	False	AAGAAA	-10	NA	8328462	8324315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8324300_8328500
ES.11517.39	chr15	-	3621	26	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	109395	9852	109395	-9852	internal_fragment	FALSE	canonical	3	23	junction_20	17.1718839968129	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGAAATGTTATCACTG	NA	False	NA	NA	False	AATAAA	-23	NA	8364552	8329952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333
ES.11517.4	chr15	-	3647	20	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	120981	310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.7377978635298	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTATGCTTCCATT	8793	False	NA	NA	False	TATAAA	-16	NA	8352966	8319790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8320459_8320644_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892
ES.11517.40	chr15	-	161	1	Intergenic	novelGene_9600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	8334084	8333923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8333900_8334100
ES.11517.41	chr15	-	4514	1	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	83999	-65334	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACTAAGTTATCTTATA	8071	False	NA	NA	False	NA	NA	NA	8389948	8385434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8385400_8389900
ES.11517.42	chr15	-	282	1	Intergenic	novelGene_9602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAACCAACAACAAA	294	False	NA	NA	False	NA	NA	NA	8444577	8444295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8444300_8444600
ES.11517.43	chr15	-	243	1	Intergenic	novelGene_9603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTATAGAATACATAATG	NA	False	NA	NA	False	NA	NA	NA	8451006	8450763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8450800_8451000
ES.11517.44	chr15	-	1227	1	Intergenic	novelGene_9604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCGCTTAGGATATTA	NA	False	NA	NA	False	AATAGA	-39	NA	8454467	8453240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8453200_8454500
ES.11517.45	chr15	-	3145	1	Intergenic	novelGene_9605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTATGCAATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	8472496	8469351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8469400_8472500
ES.11517.5	chr15	-	6359	34	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	105728	309	intron_retention	FALSE	canonical	3	23	junction_24	19.4981574792911	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTGTATGCTTCCAT	NA	False	NA	NA	False	TATAAA	-15	NA	8368219	8319791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164
ES.11517.6	chr15	-	13410	34	NIC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	85716	309	intron_retention	FALSE	canonical	3	22	junction_33	19.1835175655865	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTGTATGCTTCCAT	9788	False	NA	NA	False	TATAAA	-15	NA	8388231	8319791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123
ES.11517.7	chr15	-	9439	47	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	132	309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	24.0845333108514	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTGTATGCTTCCAT	NA	False	NA	NA	False	TATAAA	-15	NA	8473815	8319791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395322_8396168_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ES.11517.8	chr15	-	4486	24	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	117432	309	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	19.7402796064645	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTGTATGCTTCCAT	5244	False	NA	NA	False	TATAAA	-15	NA	8356515	8319791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321075_8321579_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482
ES.11517.9	chr15	-	4132	17	NNC	ENSMUSG00000022141.8	novel	9423	47	NA	NA	121842	136	intron_retention	FALSE	canonical	0	0	junction_11	22.1444123877785	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTGACTTCTGAATA	9654	False	NA	NA	False	CATAAA	-20	NA	8352105	8319964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337139_8337325_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969
ES.11518.1	chr15	+	168	1	Intergenic	novelGene_9606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	8483253	8483421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8483300_8483400
ES.11519.1	chr15	-	265	1	Intergenic	novelGene_9607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATAACATAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	8494264	8493999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8494000_8494300
ES.1152.1	chr1	+	82	1	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTACTTAACATGTAAG	NA	False	NA	NA	False	AATAAA	-10	NA	111996216	111996298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_111996200_111996300
ES.11520.1	chr15	+	155	1	Intergenic	novelGene_9608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8844	False	NA	NA	False	NA	NA	NA	8520970	8521125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8521000_8521100
ES.11521.1	chr15	+	179	1	Intergenic	novelGene_9609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8547267	8547446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8547300_8547400
ES.11522.1	chr15	+	175	1	Intergenic	novelGene_9610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACATTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8568701	8568876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8568700_8568900
ES.11523.1	chr15	-	181	1	Intergenic	novelGene_9611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGGAAGACTGC	8787	False	NA	NA	False	NA	NA	NA	8634440	8634259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8634300_8634400
ES.11524.1	chr15	-	2958	4	Intergenic	novelGene_9612	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAGAAGTTGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	8645937	8641162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8643442_8644116_8644524_8645181_8645291_8645774
ES.11525.1	chr15	+	161	1	Intergenic	novelGene_9613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAGACAAGACAG	NA	False	NA	NA	False	NA	NA	NA	8650713	8650874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8650700_8650900
ES.11526.1	chr15	+	4479	1	Antisense	novelGene_ENSMUSG00000103047.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTTGCAGCCCTCAG	NA	False	NA	NA	False	NA	NA	NA	8683257	8687736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_8683300_8687700
ES.11527.1	chr15	+	1665	1	Intergenic	novelGene_9614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8711467	8713132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8711500_8713100
ES.11528.1	chr15	+	290	3	Antisense	novelGene_ENSMUSG00000005360.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGAACCGAAAGTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	8739757	8742552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_8739870_8740493_8740557_8742437
ES.11529.1	chr15	-	4201	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	-38	0	-38	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8740286	8663607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ES.11529.10	chr15	-	3869	11	NNC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.0252035821619	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACATTTGTATGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	8739891	8663611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672583_8675143_8675437_8679026_8679070_8680332_8680538_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ES.11529.11	chr15	-	3213	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	297	653	14	-51	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTGGAGTGTGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	8739951	8664260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ES.11529.12	chr15	-	2199	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	280	1684	-3	-1082	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGTTTTAAAAT	NA	False	NA	NA	False	AGTAAA	-26	NA	8739968	8665291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ES.11529.13	chr15	-	5595	2	NNC	ENSMUSG00000005360.15	novel	1252	5	NA	NA	24685	1254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	8714387	8708750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8710991_8711032
ES.11529.14	chr15	-	2202	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	-45	-905	20	905	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGGTTGCACATA	NA	False	NA	NA	False	AATAAA	-13	NA	8739945	8709099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ES.11529.15	chr15	-	3006	1	NIC	ENSMUSG00000005360.15	novel	1252	5	NA	NA	21623	1056	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATGCTTTATACTTT	NA	False	NA	NA	False	NA	NA	NA	8717449	8714443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8714400_8717400
ES.11529.16	chr15	-	3263	2	FSM	ENSMUSG00000005360.15	ENSMUST00000133309.2	1373	2	-3	-1887	-3	1887	multi-exon	FALSE	canonical	3	64	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGGAGAAGGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	8739968	8735206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_8738324_8739822
ES.11529.2	chr15	-	5097	9	NNC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	19.6433035663556	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8739911	8663607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8665824_8668539_8668675_8671657_8671861_8672383_8672618_8675143_8675437_8679026_8680538_8717771_8717910_8738045_8738324_8739822
ES.11529.3	chr15	-	3809	10	NNC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	17.358955421722	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8740341	8663607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8740269
ES.11529.4	chr15	-	3981	11	NIC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	19.3225257148231	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8739964	8663607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ES.11529.5	chr15	-	3796	10	NNC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.6432409329262	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTGTATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	8740267	8663608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8740207
ES.11529.7	chr15	-	5215	10	NIC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	28	-2	intron_retention	FALSE	canonical	1	3	junction_6	20.3579086461366	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTGTATGTTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	8739937	8663609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8680538_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ES.11529.8	chr15	-	3806	11	NNC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.6604076963132	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACATTTGTATGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	8739978	8663610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8664213_8664296_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ES.11529.9	chr15	-	2693	4	NNC	ENSMUSG00000005360.15	novel	4435	6	NA	NA	226	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.3026129524645	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACATTTGTATGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	8672505	8663610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_8665824_8668539_8668675_8671665_8671889_8672383
ES.1153.1	chr1	-	202	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAAAAATAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	112215542	112215340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_112215300_112215500
ES.11530.1	chr15	+	4471	1	Intergenic	novelGene_9615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATGCTGTGCTCCTGA	NA	False	NA	NA	False	NA	NA	NA	8742855	8747326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8742900_8747300
ES.11531.1	chr15	+	1457	1	Intergenic	novelGene_9616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTGGTCACAGTG	NA	False	NA	NA	False	NA	NA	NA	8758591	8760048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8758600_8760000
ES.11532.1	chr15	+	3547	1	Intergenic	novelGene_9617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGGTGGTGATGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	8801255	8804802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8801300_8804800
ES.11533.1	chr15	+	176	1	Intergenic	novelGene_9618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	2440	False	NA	NA	False	NA	NA	NA	8834767	8834943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8834800_8834900
ES.11534.1	chr15	-	177	1	Intergenic	novelGene_9619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACCT	NA	False	NA	NA	False	NA	NA	NA	8835157	8834980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8835000_8835200
ES.11535.1	chr15	+	189	1	Intergenic	novelGene_9620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	5413	False	NA	NA	False	NA	NA	NA	8843487	8843676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8843500_8843700
ES.11536.1	chr15	+	194	1	Intergenic	novelGene_9621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTAATGTAAGACGGG	5796	False	NA	NA	False	NA	NA	NA	8843870	8844064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_8843900_8844100
ES.11537.1	chr15	-	181	1	Intergenic	novelGene_9622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCATATCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	8872331	8872150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_8872200_8872300
ES.11538.1	chr15	+	3724	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-43	-388	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCGTTCAGAAATGAAGG	0	True	NA	NA	False	AGTAAA	-32	NA	9071296	9110591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.10	chr15	+	2839	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	35	-164	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTGTCTGGGTTTGTG	41	False	NA	NA	False	AAGAAA	-27	NA	9071374	9109784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.11	chr15	+	1786	10	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	39	441	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	112.290078494919	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTTGATGATGG	45	False	NA	-19	True	AGTAAA	-6	NA	9071378	9108845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9106816_9106941_9108306
ES.11538.12	chr15	+	3359	13	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	39	304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	124.125020980193	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTTTTCTTATTTC	45	False	NA	0	True	AATAAA	-20	NA	9071378	9110252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091329_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.13	chr15	+	3202	11	FSM	ENSMUSG00000022253.18	ENSMUST00000189437.8	2533	11	-363	-306	58	306	multi-exon	FALSE	canonical	2	11	junction_4	109.380254159515	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	-35	True	NA	2	True	AATAAA	-22	NA	9071397	9110254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.14	chr15	+	2661	9	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	62	304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.007936257999	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTTTTCTTATTTC	-31	True	NA	0	True	AATAAA	-20	NA	9071401	9110252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098923_9108620
ES.11538.15	chr15	+	3682	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	62	391	62	-391	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTCGTTCAGAAATGA	-31	True	NA	NA	False	AGTAAA	-29	NA	9071401	9110588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.17	chr15	+	3180	11	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	82	303	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	106.053948535639	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTGTTTTCTTATTT	-11	True	NA	-1	True	AATAAA	-19	NA	9071421	9110251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.18	chr15	+	3095	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	103	160	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTAACTTCTACTCTG	10	True	NA	NA	False	ATTAAA	-22	NA	9071442	9110108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.19	chr15	+	3256	14	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	103	304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	120.261352476214	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTTTTCTTATTTC	10	True	NA	0	True	AATAAA	-20	NA	9071442	9110252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306_9108871_9108919
ES.11538.2	chr15	+	2025	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-41	490	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAGTTGGTAAATGTG	2	True	NA	30	True	GATAAA	-16	NA	9071298	9108894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.20	chr15	+	2830	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	111	1194	111	-163	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGTCTGGGTTTGTGT	18	True	NA	NA	False	AAGAAA	-28	NA	9071450	9109785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.21	chr15	+	3572	13	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	146	304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	115.69605174287	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTTTTCTTATTTC	53	False	NA	0	True	AATAAA	-20	NA	9071485	9110252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9099274_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.22	chr15	+	1901	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	149	2085	149	490	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAGTTGGTAAATGTG	56	False	NA	30	True	GATAAA	-16	NA	9071488	9108894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.23	chr15	+	8071	9	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-136	350	intron_retention	FALSE	canonical	0	0	junction_5	117.603146216417	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTGTTTTCTTCCTA	86	False	NA	NA	False	AATAAA	-35	NA	9071518	9108754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091329_9092802_9092940_9096102_9096182_9100194_9106941_9108306
ES.11538.24	chr15	+	7504	10	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-135	341	intron_retention	FALSE	canonical	3	134	junction_7	70.7192327202665	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGTACAAGTGTTGTT	87	False	NA	NA	False	AATAAA	-26	NA	9071519	9108745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9098964_9100194_9103468_9106816_9106941_9108306
ES.11538.25	chr15	+	1657	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-135	343	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAAGTGTTGTTTT	87	False	NA	NA	False	AATAAA	-28	NA	9071519	9108747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.26	chr15	+	2983	10	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-133	302	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	114.096234018849	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTTGTTTTCTTATT	89	False	NA	-2	True	AATAAA	-18	NA	9071521	9110250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.28	chr15	+	4638	7	NIC	ENSMUSG00000022253.18	novel	2533	11	NA	NA	-114	340	intron_retention	FALSE	canonical	0	0	junction_1	141.96908896736	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTGTACAAGTGTTGT	108	False	NA	NA	False	AATAAA	-25	NA	9071540	9108744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9106941_9108306
ES.11538.29	chr15	+	3053	10	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-1639	-422	combination_of_known_junctions	FALSE	canonical	3	231	junction_5	46.6883547486501	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAACAAATAATTATAT	NA	False	NA	NA	False	AAAACA	-20	NA	9084240	9110557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.3	chr15	+	3449	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	-39	725	-39	306	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	4	True	NA	2	True	AATAAA	-22	NA	9071300	9110254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.30	chr15	+	2493	7	ISM	ENSMUSG00000022253.18	ENSMUST00000189437.8	2533	11	21041	-304	504	304	3prime_fragment	FALSE	canonical	3	231	junction_2	56.5530724187466	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTTTTCTTATTTC	560	False	NA	0	True	AATAAA	-20	NA	9092801	9110252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.31	chr15	+	2605	7	NIC	ENSMUSG00000022253.18	novel	420	4	NA	NA	-72	306	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	152.528321595987	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	2422	False	NA	2	True	AATAAA	-22	NA	9094663	9110254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9094925_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.32	chr15	+	2875	7	NIC	ENSMUSG00000022253.18	novel	420	4	NA	NA	2	-394	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	141.542396475402	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGTGTCGTTCAGAAA	2496	False	NA	NA	False	AGTAAA	-26	NA	9094737	9110585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9094925_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.33	chr15	+	2521	7	NIC	ENSMUSG00000022253.18	novel	420	4	NA	NA	22	303	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	141.542396475402	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTGTTTTCTTATTT	2516	False	NA	-1	True	AATAAA	-19	NA	9094757	9110251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9094925_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.34	chr15	+	4150	3	NIC	ENSMUSG00000022253.18	novel	2533	11	NA	NA	1147	307	intron_retention	FALSE	canonical	3	361	junction_1	16.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	9149	False	NA	3	True	AATAAA	-23	NA	9101390	9110255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9103468_9106816_9106941_9108306
ES.11538.4	chr15	+	3383	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	-38	307	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	5	True	NA	3	True	AATAAA	-23	NA	9071301	9110255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.5	chr15	+	3501	14	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	8	306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	137.608139294157	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	14	False	NA	2	True	AATAAA	-22	NA	9071347	9110254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9099174_9099274_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ES.11538.6	chr15	+	3278	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	8	306	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	124.272694021409	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTCTTATTTCCT	14	False	NA	2	True	AATAAA	-22	NA	9071347	9110254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9108306
ES.11538.7	chr15	+	1708	11	FSM	ENSMUSG00000022253.18	ENSMUST00000190874.8	1289	11	-419	0	8	0	multi-exon	FALSE	canonical	3	231	junction_7	42.2233347806636	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATATCTGGTCTATCT	14	False	NA	NA	False	AATAAA	-10	NA	9071347	9107260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816
ES.11538.8	chr15	+	2833	12	NNC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	8	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	107.049691095474	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGTCTGGGTTTGTGT	14	False	NA	NA	False	AAGAAA	-28	NA	9071347	9109785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106850_9106941_9108306
ES.11538.9	chr15	+	3184	11	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	33	303	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	108.76322908042	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTGTTTTCTTATTT	39	False	NA	-1	True	AATAAA	-19	NA	9071372	9110251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9108306
ES.11539.1	chr15	-	4994	1	Antisense	novelGene_ENSMUSG00000022253.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAAGGATATCAGTCAA	NA	False	NA	NA	False	NA	NA	NA	9078229	9073235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_9073200_9078200
ES.1154.1	chr1	-	1978	4	Genic_Genomic	ENSMUSG00000101054.2	novel	669	1	NA	NA	-12005	8944	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGAACTGTATGTCT	NA	False	NA	NA	False	AATAAA	-34	NA	112344590	112322972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_112324114_112328725_112328771_112331911_112332587_112344473
ES.11540.1	chr15	-	2124	1	Antisense	novelGene_ENSMUSG00000022253.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGATAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	9094568	9092444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_9092400_9094600
ES.11541.1	chr15	+	7875	2	Antisense	novelGene_ENSMUSG00000054115.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGACAGCA	NA	False	NA	NA	False	NA	NA	NA	9118525	9126455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_9119180_9119234
ES.11542.1	chr15	-	3905	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-42	-745	32	745	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGTCCACCTTCCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	9140494	9111327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ES.11542.2	chr15	-	3242	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	-121	-3	-47	3	multi-exon	FALSE	canonical	3	163	junction_7	20.0690167197789	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTGCTTTTTATATC	NA	False	NA	NA	False	AATAAA	-23	NA	9140573	9112069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ES.11542.3	chr15	-	3088	10	NNC	ENSMUSG00000054115.13	novel	3118	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	62.9504998558293	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	9140437	9112072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127987_9128085_9139518_9139791_9140270
ES.11542.4	chr15	-	6136	9	FSM	ENSMUSG00000054115.13	ENSMUST00000110585.10	6184	9	46	2	-28	-2	multi-exon	FALSE	canonical	3	163	junction_6	21.2863659416068	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTTGAGCTGCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	9140480	9112074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ES.11542.5	chr15	-	2986	9	NIC	ENSMUSG00000054115.13	novel	3118	10	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	65.7419196555744	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTACTTGAGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	9140467	9112075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9127972_9128085_9139518_9139791_9140270
ES.11542.8	chr15	-	602	1	ISM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	26939	839	26926	478	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAATGTGATATTATTCT	NA	False	NA	NA	False	AATATA	-40	NA	9113513	9112911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_9112900_9113500
ES.11543.1	chr15	+	6908	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	-11	1201	-11	-1201	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTGCTACTATCTTAA	21	False	NA	NA	False	AATAAA	-12	NA	9140625	9201368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.11	chr15	+	2797	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	15	5286	15	-648	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTATGATTCAGACATAA	47	False	NA	NA	False	ACTAAA	-18	NA	9140651	9197283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.12	chr15	+	5783	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	19	2296	19	-2296	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACATTTCAGGCTGTAAA	51	False	NA	NA	False	AATAAA	-8	NA	9140655	9200273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.13	chr15	+	172	1	Intergenic	novelGene_9623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAGAAAAGAAATAA	8101	False	NA	NA	False	NA	NA	NA	9148705	9148877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_9148700_9148900
ES.11543.2	chr15	+	3077	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	-11	5032	-11	-394	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTGACTTAATGCTA	21	False	NA	NA	False	NA	NA	NA	9140625	9197537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.3	chr15	+	8106	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	-9	1	-9	-1	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTGATTATTTATG	23	False	NA	10	True	AATAAA	-20	NA	9140627	9202568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.4	chr15	+	7209	18	FSM	ENSMUSG00000039704.9	ENSMUST00000090380.6	3210	18	-124	-3875	-9	-763	multi-exon	FALSE	canonical	2	6	junction_9	7.56242761411209	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTCTAATTATTGAT	23	False	NA	NA	False	TATAAA	-20	NA	9140627	9201806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.5	chr15	+	6453	18	NNC	ENSMUSG00000039704.9	novel	8098	18	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.5859474652496	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTCTTGTTGATTATT	27	False	NA	6	True	AATAAA	-16	NA	9140631	9202564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175931_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742_9199572_9200975
ES.11543.6	chr15	+	7961	18	FSM	ENSMUSG00000039704.9	ENSMUST00000090380.6	3210	18	-117	-4634	-2	-4	multi-exon	FALSE	canonical	2	6	junction_9	7.56242761411209	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCTTGTTGATTATTT	30	False	NA	7	True	AATAAA	-17	NA	9140634	9202565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.7	chr15	+	2923	18	NNC	ENSMUSG00000039704.9	novel	3210	18	NA	NA	-1	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.95213458002664	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATATTGACTTAATGCT	31	False	NA	NA	False	NA	NA	NA	9140635	9197536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9140820_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.8	chr15	+	4215	18	NNC	ENSMUSG00000039704.9	novel	8098	18	NA	NA	0	927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	9.64705882352941	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAACTAGTTTGTCTG	32	False	NA	NA	False	NA	NA	NA	9140636	9198858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175345_9175393_9175872_9176007_9177738_9177845_9178385_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11543.9	chr15	+	4461	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	10	3627	10	1011	multi-exon	FALSE	canonical	2	16	junction_6	5.43473386468287	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGGTTTTTTTCCCCT	42	False	NA	NA	False	NA	NA	NA	9140646	9198942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ES.11544.1	chr15	-	4545	1	Genic_Genomic	ENSMUSG00000054115.13	novel	NA	NA	NA	NA	2094	3491	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTATTTATTATAGAAT	2005	False	NA	NA	False	NA	NA	NA	9153417	9148872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_9148900_9153400
ES.11544.2	chr15	-	4619	4	Antisense	novelGene_ENSMUSG00000039704.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTATTTATTATAGAAT	NA	False	NA	NA	False	NA	NA	NA	9160887	9148872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_9149638_9151568_9151666_9156291_9156460_9157298
ES.11545.1	chr15	-	930	1	Intergenic	novelGene_9624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	9168234	9167304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9167300_9168200
ES.11546.1	chr15	-	179	1	Intergenic	novelGene_9625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	9170419	9170240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9170200_9170400
ES.11547.1	chr15	-	175	1	Intergenic	novelGene_9626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTC	NA	False	NA	NA	False	NA	NA	NA	9191572	9191397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9191400_9191600
ES.11548.1	chr15	-	5052	1	Intergenic	novelGene_9627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCTGTGTTGATCTGT	NA	False	NA	NA	False	NA	NA	NA	9218090	9213038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9213000_9218100
ES.11549.1	chr15	-	7028	2	Intergenic	novelGene_9629	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226308	9219242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9220283_9220320
ES.11549.2	chr15	-	7064	1	Intergenic	novelGene_9628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226306	9219242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9219200_9226300
ES.11549.3	chr15	-	7068	2	Intergenic	novelGene_9630	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	117	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	9226346	9219242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_9220307_9220342
ES.1155.1	chr1	-	4193	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	112372108	112367915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_112367900_112372100
ES.11550.1	chr15	-	3407	4	NNC	ENSMUSG00000115409.2	novel	1208	4	NA	NA	-6758	2582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGGCTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	9268171	9248025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_9250883_9253932_9254153_9255199_9255429_9268070
ES.11551.1	chr15	-	471	2	Antisense	novelGene_ENSMUSG00000049152.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACCGTCTTGGCTAC	NA	False	NA	-2	True	NA	NA	NA	9357183	9354836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_9355049_9356924
ES.11552.1	chr15	+	925	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	24	0	24	0	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCCTCCTTTGAAGCT	21	False	NA	9	True	AATAAA	-22	NA	9436137	9466124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
ES.11553.1	chr15	-	5327	36	NNC	ENSMUSG00000072663.13	novel	5313	35	NA	NA	19	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.06127891108089	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGTTTGTTGTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	9748887	9578278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_9578438_9583800_9583924_9584071_9584312_9589540_9589721_9592797_9592891_9596598_9596782_9597388_9597496_9607258_9607489_9609594_9609734_9612538_9612668_9614283_9614438_9626057_9626239_9630572_9630725_9634634_9634773_9647289_9647429_9647508_9647637_9653010_9653160_9659417_9659469_9663159_9663313_9667219_9667378_9668875_9668988_9676372_9676630_9679395_9679500_9681167_9681221_9682696_9682755_9684897_9685050_9687846_9688067_9704458_9704628_9713186_9713375_9716417_9716607_9717536_9717724_9723679_9723745_9725200_9725342_9729702_9729956_9740597_9740701_9748797
ES.11553.2	chr15	-	4226	18	FSM	ENSMUSG00000072663.13	ENSMUST00000041840.14	4247	18	19	2	-11	-2	multi-exon	FALSE	canonical	0	0	junction_1	3.72683154387227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGACTGACTGTACCTG	NA	False	NA	NA	False	AATAAA	-13	NA	9748935	9661633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_9663313_9667219_9667378_9668875_9668988_9676372_9676630_9679395_9679500_9681167_9681221_9682696_9682755_9684897_9685050_9687846_9688067_9704458_9704628_9713186_9713375_9716417_9716607_9717536_9717724_9723679_9723745_9725200_9725342_9729702_9729956_9740597_9740701_9748797
ES.11553.3	chr15	-	1898	9	FSM	ENSMUSG00000072663.13	ENSMUST00000159368.2	1422	9	-89	-387	2	384	multi-exon	FALSE	canonical	2	4	junction_2	3.23795846174715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGCATAGTCTGTATA	NA	False	NA	NA	False	AATAAA	-11	NA	9748952	9704010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_9704628_9713186_9713375_9716417_9716607_9717536_9717724_9723679_9723745_9725200_9725342_9729702_9729956_9740597_9740701_9748797
ES.11553.4	chr15	-	1375	6	ISM	ENSMUSG00000072663.13	ENSMUST00000159368.2	1422	9	23142	5	23142	-5	3prime_fragment	FALSE	canonical	2	4	junction_2	0.748331477354788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAATTTGTGGCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	9725721	9704402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_9704628_9713186_9713375_9716417_9716607_9717536_9717724_9723679_9723745_9725200
ES.11553.5	chr15	-	3579	1	NIC	ENSMUSG00000072663.13	novel	5313	35	NA	NA	33948	-6939	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CATCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9714915	9711336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_9711300_9714900
ES.11554.1	chr15	+	2034	3	Intergenic	novelGene_9631	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCAGATACTGTCA	NA	False	NA	NA	False	NA	NA	NA	9836109	9861751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_9836216_9836285_9836331_9859868
ES.11555.1	chr15	+	217	1	Intergenic	novelGene_9632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTGAGATCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	9899882	9900099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_9899900_9900100
ES.11556.1	chr15	+	8911	10	FSM	ENSMUSG00000005268.21	ENSMUST00000124470.8	9900	10	-271	1260	-30	-1260	multi-exon	FALSE	canonical	0	0	junction_1	0.314269680527354	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTATGCTAGGTTTTATG	88	False	NA	NA	False	AATAAA	-23	NA	10177469	10335835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_10177958_10293736_10293797_10314250_10314360_10317588_10317722_10319260_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366
ES.11557.1	chr15	-	2373	1	Intergenic	novelGene_9633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTTGTCTTCAGTCAT	NA	False	NA	NA	False	AATACA	-25	NA	10443965	10441592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_10441600_10444000
ES.11558.1	chr15	-	3342	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-88	-1194	-88	1194	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCTCTCTGTCTGTGT	NA	False	NA	NA	False	AATAAA	-3	NA	10470690	10445647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.10	chr15	-	4485	11	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-50	1	intron_retention	FALSE	non_canonical	0	0	junction_7	252.894226901288	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470652	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10454944_10460040_10460193_10461205_10461511_10461983_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.11	chr15	-	2097	12	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	243.609225082825	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470658	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470361
ES.11558.14	chr15	-	1948	13	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	233.972027649081	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470658	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350_10470455_10470614
ES.11558.15	chr15	-	2528	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-7	1	intron_retention	FALSE	canonical	3	806	junction_8	35.435716445417	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470609	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.19	chr15	-	6472	8	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-2062	1	intron_retention	FALSE	canonical	3	660	junction_1	74.7613891398658	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	6491	False	NA	-23	True	ATTAAA	-15	NA	10464076	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10451684_10452291_10454944_10460040_10460193_10461205_10462085_10462308_10462433_10463972
ES.11558.2	chr15	-	2270	12	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-44	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.667919198778	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTTCCATGCTACTT	NA	False	NA	NA	False	GATAAA	-20	NA	10470646	10446673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447311_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.20	chr15	-	1940	11	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	254.04794823025	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470648	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462408_10470389
ES.11558.21	chr15	-	1973	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-44	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	254.779826516936	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	NA	False	NA	-23	True	ATTAAA	-15	NA	10470646	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10462308_10462433_10463972_10464067_10470350
ES.11558.22	chr15	-	4444	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	13	1	intron_retention	FALSE	canonical	3	660	junction_1	62.5872191425693	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCTTTCTGCTTCA	-22	True	NA	-23	True	ATTAAA	-15	NA	10470589	10446849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.24	chr15	-	8403	11	ISM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-68	9	-68	0	intron_retention	FALSE	canonical	3	660	junction_1	63.7435486931815	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGCCTTTCTGCTTC	NA	False	NA	-24	True	ATTAAA	-14	NA	10470670	10446850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972
ES.11558.25	chr15	-	2558	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-56	0	intron_retention	FALSE	canonical	3	660	junction_1	63.7162459660015	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGCCTTTCTGCTTC	NA	False	NA	-24	True	ATTAAA	-14	NA	10470658	10446850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.26	chr15	-	4098	10	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-56	0	intron_retention	FALSE	canonical	3	660	junction_1	67.1151580825408	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGCCTTTCTGCTTC	NA	False	NA	-24	True	ATTAAA	-14	NA	10470658	10446850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10462085_10462308_10464067_10470350
ES.11558.28	chr15	-	2001	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-81	140	-81	-130	multi-exon	FALSE	canonical	3	660	junction_1	60.8163473021321	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGATTGAATTCTACT	NA	False	NA	NA	False	TATAAA	-36	NA	10470683	10446981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.29	chr15	-	4365	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-44	-134	intron_retention	FALSE	canonical	3	660	junction_1	62.5872191425693	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACTAGTGATTGAATTC	NA	False	NA	NA	False	TATAAA	-32	NA	10470646	10446985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.3	chr15	-	2168	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-99	-9	-99	9	multi-exon	FALSE	canonical	3	660	junction_1	60.8163473021321	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGATTTAATCCTGGAG	NA	False	NA	-6	True	ATTAAA	-32	NA	10470701	10446832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.30	chr15	-	2208	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-80	-391	intron_retention	FALSE	canonical	3	806	junction_8	35.435716445417	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTACTGGTCATGCA	NA	False	NA	NA	False	AATAAA	-14	NA	10470682	10447242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.31	chr15	-	1739	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	-80	401	-80	-391	multi-exon	FALSE	canonical	3	660	junction_1	60.8163473021321	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTACTGGTCATGCA	NA	False	NA	NA	False	AATAAA	-14	NA	10470682	10447242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.5	chr15	-	1730	10	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-56	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	262.829945491212	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGATTTAATCCTGGA	NA	False	NA	-7	True	ATTAAA	-31	NA	10470658	10446833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10461359_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.7	chr15	-	1783	11	NIC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	195	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	244.214024986281	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTCTGCTTCAGT	160	False	NA	-21	True	ATTAAA	-17	NA	10470407	10446847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10447313_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11558.9	chr15	-	2064	12	NNC	ENSMUSG00000044224.17	novel	2060	12	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.667919198778	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTCTGCTTCAG	NA	False	NA	-22	True	ATTAAA	-16	NA	10470625	10446848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10447313_10447793_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ES.11559.1	chr15	+	882	1	Intergenic	novelGene_9634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATGTTCAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	10482021	10482903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_10482000_10482900
ES.1156.1	chr1	-	5175	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGTCAACATGAAGAAATA	NA	False	NA	NA	False	AAAACA	-10	NA	112718726	112713551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_112713600_112718700
ES.11560.1	chr15	-	2659	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	7	-2	7	2	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGCTTTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	10486026	10474862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ES.11560.10	chr15	-	5403	5	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	3088	-1400	intron_retention	FALSE	canonical	3	2074	junction_1	114.383947737434	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTATTCTTTTCAG	3578	False	NA	-9	True	AATAAA	-16	NA	10482383	10476264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10476683_10476892_10478857_10478978_10479233_10479334_10479385_10479666
ES.11560.13	chr15	-	3253	10	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	19	-1402	intron_retention	FALSE	canonical	3	21	junction_9	756.239641292182	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10486014	10476266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10485503_10485820
ES.11560.14	chr15	-	1163	10	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	-3	-1403	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_2	755.343842887234	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTACTTTATTCTTTT	NA	False	NA	-12	True	AATAAA	-13	NA	10485998	10476267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10476683_10476892_10476959_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ES.11560.16	chr15	-	5281	8	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	1	-1405	intron_retention	FALSE	canonical	3	2074	junction_1	209.263333761896	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGCTACTTTATTCTT	NA	False	NA	-14	True	AATAAA	-11	NA	10485994	10476269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10476683_10476892_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380
ES.11560.2	chr15	-	2537	9	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	804.566643836917	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTAGCAATAAGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	10486027	10474873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10485820
ES.11560.3	chr15	-	1304	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	-31	1391	-31	-1391	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTCAGAGCCTCACT	NA	False	NA	0	True	AATAAA	-25	NA	10486064	10476255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ES.11560.7	chr15	-	1287	11	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	-10	-1397	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	953.243935202317	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTCTTTTCAGAGC	NA	False	NA	-6	True	AATAAA	-19	NA	10485983	10476261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485432_10485503_10485820
ES.11560.8	chr15	-	1218	10	NNC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	1	-1397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	770.983354770603	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTCTTTTCAGAGC	NA	False	NA	-6	True	AATAAA	-19	NA	10485994	10476261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479223_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ES.11560.9	chr15	-	3234	7	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	15	-1399	intron_retention	FALSE	canonical	3	2074	junction_1	231.626135543178	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTATTCTTTTCAGA	NA	False	NA	-8	True	AATAAA	-17	NA	10486018	10476263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10476683_10476892_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ES.11561.1	chr15	+	1512	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	-3	5	-3	0	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGTACTGTCCTGTG	1	True	NA	22	True	AATAAA	-27	NA	10486100	10493770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.10	chr15	+	7631	1	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	35	False	NA	17	True	AATAAA	-22	NA	10486134	10493765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10486100_10493800
ES.11561.11	chr15	+	7339	2	NIC	ENSMUSG00000022248.15	novel	1073	5	NA	NA	0	3	intron_retention	FALSE	canonical	3	837	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	35	False	NA	15	True	AATAAA	-20	NA	10486134	10493763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10492950_10493239
ES.11561.12	chr15	+	1482	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	222	junction_1	230.452251019598	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTATCCGACTTACTG	36	False	NA	10	True	AATAAA	-15	NA	10486135	10493758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.13	chr15	+	2853	5	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_4	352.075986116634	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	36	False	NA	18	True	AATAAA	-23	NA	10486135	10493766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ES.11561.14	chr15	+	1212	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	365.593315341271	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATCCGACTTACTGT	36	False	NA	11	True	AATAAA	-16	NA	10486135	10493759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486178_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ES.11561.15	chr15	+	1640	5	FSM	ENSMUSG00000022248.15	ENSMUST00000170100.2	1073	5	-559	-8	1	-2	multi-exon	FALSE	canonical	3	38	junction_3	311.961836608262	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTTACTGTACTGTCCTG	36	False	NA	20	True	AATAAA	-25	NA	10486135	10493768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_10486803_10488075_10488185_10490341_10490601_10492873_10492950_10493239
ES.11561.16	chr15	+	5177	3	NIC	ENSMUSG00000022248.15	novel	1073	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	719	junction_1	59	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATCCGACTTACTGT	36	False	NA	11	True	AATAAA	-16	NA	10486135	10493759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10488185_10490341_10492950_10493239
ES.11561.17	chr15	+	5384	3	NNC	ENSMUSG00000022248.15	novel	4206	3	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_2	359.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTATCCGACTTACTG	37	False	NA	10	True	AATAAA	-15	NA	10486136	10493758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10488185_10490341_10493477_10493557
ES.11561.18	chr15	+	4990	4	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	345	junction_1	209.725746843083	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTACTGTACTGTCCTGT	45	False	NA	21	True	AATAAA	-26	NA	10486144	10493769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10486351_10486538_10488185_10490341_10492950_10493239
ES.11561.19	chr15	+	2879	4	NIC	ENSMUSG00000022248.15	novel	1073	5	NA	NA	4	-3	intron_retention	FALSE	canonical	3	38	junction_2	352.149904948951	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATTATCCGACTTACT	59	False	NA	9	True	AATAAA	-14	NA	10486158	10493757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10488185_10490341_10490601_10492873_10492950_10493239
ES.11561.2	chr15	+	1484	6	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	3	38	junction_4	293.090839160831	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	1	True	NA	17	True	AATAAA	-22	NA	10486100	10493765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492873_10492950_10493239
ES.11561.20	chr15	+	1114	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	4	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	316.528039832177	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTTTTTTTTTTTTT	59	False	NA	NA	False	NA	NA	NA	10486158	10493433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486348_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.21	chr15	+	1530	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	331.385334618175	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGTACTGTCCTGTG	59	False	NA	22	True	AATAAA	-27	NA	10486158	10493770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486351_10486538_10486879_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.22	chr15	+	1265	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	57	192	-5	134	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACCGGCGAATATTTGTG	61	False	NA	NA	False	NA	NA	NA	10486160	10493583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.23	chr15	+	2911	4	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	719	junction_1	60.6025302002042	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTACTGTACTGTCCTGT	62	False	NA	21	True	AATAAA	-26	NA	10486161	10493769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.24	chr15	+	4419	4	NNC	ENSMUSG00000022248.15	novel	1073	5	NA	NA	119	0	intron_retention	FALSE	canonical	0	0	junction_3	369.902990285591	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCGACTTACTGTA	714	False	NA	12	True	AATAAA	-17	NA	10486813	10493760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10488185_10490341_10492950_10493239_10493477_10493557
ES.11561.3	chr15	+	1698	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	683	junction_1	74.1598779664584	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGTACTGTCCTGTG	3	True	NA	22	True	AATAAA	-27	NA	10486102	10493770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ES.11561.4	chr15	+	1654	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	2	5	intron_retention	FALSE	canonical	0	0	junction_4	373.221971486139	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	6	False	NA	17	True	AATAAA	-22	NA	10486105	10493765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492995_10493239_10493477_10493557
ES.11561.5	chr15	+	1618	6	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_5	316.528039832177	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTACTGTCCTGTGTCTT	6	False	NA	26	True	AATAAA	-31	NA	10486105	10493774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ES.11561.7	chr15	+	3837	5	NNC	ENSMUSG00000022248.15	novel	1073	5	NA	NA	-9	3	intron_retention	FALSE	canonical	0	0	junction_4	328.153451147478	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCGACTTACTGTACTG	26	False	NA	15	True	AATAAA	-20	NA	10486125	10493763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486803_10488075_10488185_10490341_10492950_10493239_10493477_10493557
ES.11561.8	chr15	+	1413	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.625639091486	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTTACTGTACTGTCC	32	False	NA	18	True	AATAAA	-23	NA	10486131	10493766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486368_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ES.11561.9	chr15	+	1200	7	NNC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	359.073653849581	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGACTTACTGTACTGTC	35	False	NA	17	True	AATAAA	-22	NA	10486134	10493765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_10486159_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239_10493477_10493557
ES.11562.1	chr15	+	3191	1	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	10570329	10573520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10570300_10573500
ES.11563.1	chr15	+	3248	4	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10575175	10590242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10575930_10578452_10578571_10583865_10583925_10587925
ES.11563.2	chr15	+	1952	5	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCCTATCATTTACT	NA	False	NA	NA	False	NA	NA	NA	10575175	10590280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10575930_10578452_10578571_10583865_10583925_10587925_10588011_10589344
ES.11563.3	chr15	+	4709	1	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCCTATCATTTACT	NA	False	NA	NA	False	NA	NA	NA	10585571	10590280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10585600_10590300
ES.11563.4	chr15	+	4445	2	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10585603	10590242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10588898_10589091
ES.11563.5	chr15	+	4557	2	Antisense	novelGene_ENSMUSG00000022246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCTATCATTT	NA	False	NA	NA	False	NA	NA	NA	10585605	10590277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_10588912_10589026
ES.11564.1	chr15	+	3075	1	Intergenic	novelGene_9636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAACCAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	10628510	10631585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_10628500_10631600
ES.11565.1	chr15	+	4967	1	Intergenic	novelGene_9638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10658848	10663815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_10658800_10663800
ES.11566.1	chr15	+	9779	1	Intergenic	novelGene_9639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGACTCTCTTACCC	NA	False	NA	NA	False	NA	NA	NA	10701278	10711057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_10701300_10711100
ES.11566.2	chr15	+	181	1	Intergenic	novelGene_9640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAATTATATTG	NA	False	NA	NA	False	NA	NA	NA	10705521	10705702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_10705500_10705700
ES.11567.1	chr15	+	3532	1	NIC	ENSMUSG00000096971.3	novel	2468	7	NA	NA	-11	-69	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATATCTCCCAGT	92	False	NA	NA	False	ATTAAA	-13	NA	10714952	10718484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10715000_10718500
ES.11568.1	chr15	-	5222	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-489	4	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTGTTTGTGAGCAG	8351	False	NA	1	True	AATAAA	-30	NA	10715199	10569050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.10	chr15	-	5221	21	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	-20699	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	67.108475619701	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGATTTGTGGTGTT	NA	False	NA	-8	True	AATAAA	-21	NA	10735409	10569059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10719306_10719422_10731845_10731891_10732871_10732998_10735183
ES.11568.11	chr15	-	4738	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22515	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	53.8056585210969	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGATTTGTGGTGTT	NA	False	NA	-8	True	AATAAA	-21	NA	10691111	10569059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
ES.11568.12	chr15	-	4889	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22299	-6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_17	45.2047246206376	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	10691327	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10691146
ES.11568.13	chr15	-	4837	17	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22502	-6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	49.8494216992534	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	10691124	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
ES.11568.14	chr15	-	4448	3	ISM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	138628	6	25175	-6	intron_retention	FALSE	canonical	3	191	junction_2	4.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	NA	False	NA	-9	True	AATAAA	-20	NA	10574998	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_10570861_10571579_10571646_10572416
ES.11568.15	chr15	-	4897	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	-1107	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	46.1092429317271	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	7733	False	NA	-9	True	AATAAA	-20	NA	10715817	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10715628
ES.11568.17	chr15	-	4755	17	NNC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-165	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	54.155411490912	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	8675	False	NA	-9	True	AATAAA	-20	NA	10714875	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608_10714709_10714754
ES.11568.18	chr15	-	4871	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	-918	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	55.4186490873484	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	7922	False	NA	-9	True	AATAAA	-20	NA	10715628	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10715291
ES.11568.2	chr15	-	5367	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-606	-2	-549	2	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTGTTTGTGAGC	8291	False	NA	-1	True	AATAAA	-28	NA	10715259	10569052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.21	chr15	-	5040	19	NNC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-119	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	55.9148658428349	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATGGATTTGTGGTGT	8721	False	NA	-9	True	AATAAA	-20	NA	10714829	10569060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10648305_10648417_10690456_10690539_10714608
ES.11568.22	chr15	-	4663	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-32	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	53.6065501801993	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	0	True	NA	-12	True	AATAAA	-17	NA	10714742	10569063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10633221_10633353_10690456_10690539_10714608
ES.11568.23	chr15	-	4100	10	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	7853	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	60.9099720190219	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	NA	False	NA	-12	True	AATAAA	-17	NA	10592320	10569063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571660_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157
ES.11568.24	chr15	-	4703	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22502	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.6093354771386	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	NA	False	NA	-12	True	AATAAA	-17	NA	10691124	10569063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10690456_10690539_10690908
ES.11568.25	chr15	-	4579	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22432	-9	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_15	54.7655203775352	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	NA	False	NA	-12	True	AATAAA	-17	NA	10691194	10569063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10691146
ES.11568.26	chr15	-	4923	18	NNC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-125	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.0130315617669	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTATGGATTTGTGG	8715	False	NA	-12	True	AATAAA	-17	NA	10714835	10569063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571637_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.27	chr15	-	5097	21	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	-20774	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	67.0171619810926	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10735484	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10719306_10719422_10731845_10731891_10732871_10732998_10735377
ES.11568.28	chr15	-	5029	15	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	26113	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	57.7588671520995	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10687513	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10686932
ES.11568.29	chr15	-	4689	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	-1077	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	55.5835307342822	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	7763	False	NA	-13	True	AATAAA	-16	NA	10715787	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10715628
ES.11568.3	chr15	-	4650	16	NIC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	55.915173849919	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	9361	False	NA	-3	True	AATAAA	-26	NA	10714189	10569054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714079
ES.11568.30	chr15	-	4792	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-102	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	45.1454931920735	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	-5	True	NA	-13	True	AATAAA	-16	NA	10714812	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.32	chr15	-	4289	12	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	3422	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	64.8972487287557	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10596751	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10596625
ES.11568.33	chr15	-	4947	14	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	26106	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	70.2666939881454	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10687520	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10633221_10633353_10686932
ES.11568.34	chr15	-	5068	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22876	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.5420411976349	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10690750	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10630684_10630837_10633221_10633353_10690456
ES.11568.35	chr15	-	4957	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22465	-10	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	44.1362313798451	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10691161	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690908
ES.11568.36	chr15	-	4731	17	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	26925	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	47.8563932510589	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10686701	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10686592
ES.11568.37	chr15	-	4672	17	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22425	-10	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	50.8483883102503	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTTATGGATTTGTG	NA	False	NA	-13	True	AATAAA	-16	NA	10691201	10569064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10691146
ES.11568.38	chr15	-	4927	18	NNC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-62	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.6761212957925	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTTTATGGATTTGT	-30	True	NA	-14	True	AATAAA	-15	NA	10714772	10569065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10630684_10630832_10633221_10633353_10690456_10690539_10714608
ES.11568.39	chr15	-	4716	17	FSM	ENSMUSG00000022246.15	ENSMUST00000227506.2	4732	17	5	11	5	-11	multi-exon	FALSE	canonical	0	0	junction_16	52.0408493397254	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTTTTATGGATTTGT	9371	False	NA	-14	True	AATAAA	-15	NA	10714179	10569065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714079
ES.11568.4	chr15	-	4868	18	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	22482	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_17	45.3846307232124	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	NA	False	NA	-3	True	AATAAA	-26	NA	10691144	10569054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690990
ES.11568.40	chr15	-	4330	17	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-99	-498	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	36.5957114119947	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTAGCGGTCTACTCTG	-2	True	NA	NA	False	AATAAA	-21	NA	10714809	10569552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.41	chr15	-	3779	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-59	1039	-2	-1039	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCCTCATAGTTCTTA	30	True	NA	NA	False	AGTAAA	-21	NA	10714712	10570093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.42	chr15	-	3349	14	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-22	-1045	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	59.8500097630656	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGACATGCCTCATAG	8875	False	NA	NA	False	AGTAAA	-15	NA	10714675	10570099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10714608
ES.11568.43	chr15	-	3773	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-203	1189	-146	-1189	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTGAAGTCTCCTTAA	8694	False	NA	NA	False	ACTAAA	-17	NA	10714856	10570243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.46	chr15	-	3332	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	-281	1708	-224	-1708	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCCCCTCGTTGCCTC	8616	False	NA	-5	True	AGTAAA	-20	NA	10714934	10570762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.5	chr15	-	5192	17	NNC	ENSMUSG00000022246.15	novel	4909	18	NA	NA	26134	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	47.8563932510589	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	NA	False	NA	-3	True	AATAAA	-26	NA	10687492	10569054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10686932
ES.11568.50	chr15	-	3093	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-162	-1711	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACACTTGCCCCTCGTTGC	8678	False	NA	-8	True	AGTAAA	-17	NA	10714872	10570765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11568.51	chr15	-	177	1	Intergenic	novelGene_9635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAATAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	10604844	10604667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_10604700_10604800
ES.11568.52	chr15	-	3575	3	NNC	ENSMUSG00000022246.15	novel	594	3	NA	NA	26092	14645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAAGTTGCCAGCCC	NA	False	NA	NA	False	AATAAA	-14	NA	10687534	10618414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10621257_10633221_10633353_10686932
ES.11568.53	chr15	-	1503	1	Intergenic	novelGene_9637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10645288	10643785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_10643800_10645300
ES.11568.54	chr15	-	4039	1	NIC	ENSMUSG00000022246.15	novel	2375	6	NA	NA	-22	-21260	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGAACTTTCTTCCTCC	8875	False	NA	NA	False	NA	NA	NA	10714675	10710636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10710600_10714700
ES.11568.6	chr15	-	3626	5	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	-144	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.6090188780862	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	8696	False	NA	-5	True	AATAAA	-24	NA	10714854	10569056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575841_10714691
ES.11568.7	chr15	-	4747	15	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	26461	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.9074238965521	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	NA	False	NA	-5	True	AATAAA	-24	NA	10687165	10569056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10686932
ES.11568.8	chr15	-	4675	16	NNC	ENSMUSG00000022246.15	novel	4732	17	NA	NA	22499	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_15	54.927831439687	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	NA	False	NA	-5	True	AATAAA	-24	NA	10691127	10569056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10690990
ES.11568.9	chr15	-	4847	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-207	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTGTGGTGTTTGT	8633	False	NA	-5	True	AATAAA	-24	NA	10714917	10569056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ES.11569.1	chr15	-	196	1	Intergenic	novelGene_9641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTGTATTTAATTGAT	NA	False	NA	NA	False	NA	NA	NA	10861762	10861566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_10861600_10861800
ES.1157.1	chr1	+	160	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	113308305	113308465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_113308300_113308500
ES.11570.1	chr15	+	1568	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	-13	1022	-13	597	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGCAGTGGTTTTAA	36	False	NA	32	True	AATAAA	-42	NA	10981828	10995690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ES.11570.2	chr15	+	3317	4	ISM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	16	5138	16	-3519	5prime_fragment	FALSE	canonical	3	110	junction_2	6.68331255192114	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTGTTTCAGTAAAG	65	False	NA	NA	False	AATAAA	-19	NA	10981857	10991574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844
ES.11570.3	chr15	+	1263	4	NIC	ENSMUSG00000022244.8	novel	2577	5	NA	NA	129	595	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	57.3313953160822	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGAGCAGTGGTTTT	178	False	NA	30	True	AATAAA	-40	NA	10981970	10995688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_10982140_10983435_10983580_10988844_10989032_10994925
ES.11571.1	chr15	+	176	1	Intergenic	novelGene_9642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	11334619	11334795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_11334600_11334800
ES.11572.1	chr15	+	182	1	Antisense	novelGene_ENSMUSG00000022241.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTACACAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	11383233	11383415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_11383200_11383400
ES.11573.1	chr15	-	3930	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	70	5	6	-5	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCATGTGTGACTCCAGA	-2	True	NA	NA	False	AATAAA	-22	NA	11399681	11382391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.10	chr15	-	3816	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	343	intron_retention	FALSE	canonical	3	2899	junction_8	224.695488383723	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	False	NA	-7	True	AATAAA	-16	NA	11399729	11383747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.11	chr15	-	3209	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-23	343	intron_retention	FALSE	canonical	3	2899	junction_10	221.796393429668	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	False	NA	-7	True	AATAAA	-16	NA	11399710	11383747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.12	chr15	-	4542	17	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-28	343	intron_retention	FALSE	non_canonical	0	0	junction_13	797.527446138219	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	False	NA	-7	True	AATAAA	-16	NA	11399715	11383747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393240_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.13	chr15	-	3902	16	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-31	343	intron_retention	FALSE	canonical	3	2899	junction_10	227.627414869123	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGACCTCTGTCCTCA	NA	False	NA	-7	True	AATAAA	-16	NA	11399718	11383747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391979_11392055_11392121_11392317_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.16	chr15	-	2592	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-25	342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	759.760872467998	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAAGACCTCTGTCCTC	NA	False	NA	-8	True	AATAAA	-15	NA	11399712	11383748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387647_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.18	chr15	-	4393	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	342	intron_retention	FALSE	canonical	3	2945	junction_10	218.908481949393	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAAGACCTCTGTCCTC	NA	False	NA	-8	True	AATAAA	-15	NA	11399729	11383748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11389661_11389829_11390397_11391979_11392055_11392121_11392317_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.19	chr15	-	4510	16	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-24	341	intron_retention	FALSE	canonical	3	2945	junction_10	220.590863112888	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAAGACCTCTGTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	11399775	11383749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.20	chr15	-	2724	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	20	341	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	753.850349051741	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAAGACCTCTGTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	11399731	11383749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384348_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.21	chr15	-	3511	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	177	341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	760.317715022988	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAAGACCTCTGTCCT	169	False	NA	-9	True	AATAAA	-14	NA	11399510	11383749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11398461
ES.11573.22	chr15	-	2699	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	21	340	intron_retention	FALSE	canonical	3	2899	junction_9	218.038709619952	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATCAAGACCTCTGTCC	NA	False	NA	-10	True	AATAAA	-13	NA	11399730	11383750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.23	chr15	-	5445	12	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	11	340	intron_retention	FALSE	canonical	3	2945	junction_7	244.675227479508	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATCAAGACCTCTGTCC	NA	False	NA	-10	True	AATAAA	-13	NA	11399740	11383750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11389829_11390397_11391294_11391899_11391979_11392055_11392121_11392317_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.28	chr15	-	2507	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	27	338	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	780.371400354568	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399724	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.29	chr15	-	3732	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	338	intron_retention	FALSE	canonical	3	2899	junction_9	221.962573608807	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399729	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.3	chr15	-	2883	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	33	1089	-31	615	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCAGCTAATCATTTTA	NA	False	NA	NA	False	NA	NA	NA	11399718	11383475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.31	chr15	-	2544	20	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	167	338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	1000.07923231818	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	159	False	NA	-12	True	AATAAA	-11	NA	11399520	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11398461_11398489_11399462
ES.11573.32	chr15	-	3851	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	338	intron_retention	FALSE	canonical	3	2945	junction_11	217.248094065287	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399707	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.33	chr15	-	4363	16	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-29	338	intron_retention	FALSE	canonical	1	53	junction_13	812.080822469182	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399716	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393363_11394309_11394501_11397266_11397348_11399571
ES.11573.34	chr15	-	2610	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	759.991666620979	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399729	11383752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387355_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.35	chr15	-	2543	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	140	337	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_18	758.336849808697	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGATATCAAGACCTCTG	132	False	NA	-13	True	AATAAA	-10	NA	11399547	11383753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399462
ES.11573.36	chr15	-	2531	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-5	336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1021.79776211669	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGATATCAAGACCTCT	NA	False	NA	-14	True	AATAAA	-9	NA	11399692	11383754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389681_11389802_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.39	chr15	-	2467	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-18	300	intron_retention	FALSE	canonical	1	27	junction_7	792.505352899903	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399705	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.4	chr15	-	2791	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	-138	1352	-138	352	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCTCACGGTTATAT	NA	False	NA	2	True	AATAAA	-25	NA	11399889	11383738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.40	chr15	-	6635	8	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-23	300	intron_retention	FALSE	canonical	3	2948	junction_4	126.155071403477	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399710	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11392436_11392872_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.42	chr15	-	2539	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-16	300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	759.61901797489	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399703	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389675_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.43	chr15	-	4364	16	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-22	300	intron_retention	FALSE	non_canonical	0	0	junction_11	824.597426357587	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399709	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391979_11392055_11392121_11392317_11392436_11392867_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.45	chr15	-	2563	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	25	300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	758.108611391974	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399726	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392978_11393238_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.46	chr15	-	5626	16	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	300	intron_retention	FALSE	canonical	3	2899	junction_7	232.064263130328	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399729	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.47	chr15	-	4519	2	ISM	ENSMUSG00000022241.7	ENSMUST00000226944.2	859	6	-1137	-300	-1137	300	intron_retention	FALSE	canonical	3	3318	junction_1	0	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11389233	11383790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_11384246_11385169
ES.11573.5	chr15	-	3161	2	NNC	ENSMUSG00000022241.7	novel	617	4	NA	NA	474	347	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCTCTGTCCTCACGGT	NA	False	NA	-3	True	AATAAA	-20	NA	11386957	11383743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686
ES.11573.51	chr15	-	4796	13	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	55	294	intron_retention	FALSE	canonical	3	2945	junction_9	118.089978641524	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACAGAGTTGAATTAT	2	True	NA	-14	True	AATAAA	-23	NA	11399632	11383796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11388305_11388383_11388547_11389661_11389829_11390397_11392121_11392317_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.52	chr15	-	1606	11	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-778	294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	949.749356409363	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACAGAGTTGAATTAT	8408	False	NA	-14	True	AATAAA	-23	NA	11391271	11383796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388298_11388383_11388547_11389661_11389829_11390397_11390497_11391146
ES.11573.53	chr15	-	2546	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-24	292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	758.108611391974	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAACAGAGTTGAATT	NA	False	NA	-16	True	AATAAA	-21	NA	11399711	11383798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393249_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.54	chr15	-	4099	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	290	intron_retention	FALSE	canonical	3	2899	junction_9	220.865122515417	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAGAAAACAGAGTTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	11399707	11383800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.55	chr15	-	3022	9	NNC	ENSMUSG00000022241.7	novel	4093	17	NA	NA	-592	289	intron_retention	FALSE	non_canonical	0	0	junction_1	1045.42203648814	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAGAAAACAGAGTTGA	8594	False	NA	-19	True	AATAAA	-18	NA	11391085	11383801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11389661_11389829_11390397
ES.11573.56	chr15	-	4669	14	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	32	289	intron_retention	FALSE	canonical	1	4	junction_1	846.860446227485	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAGAAAACAGAGTTGA	NA	False	NA	-19	True	AATAAA	-18	NA	11399719	11383801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385025_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.57	chr15	-	2532	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-23	287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	760.317715022988	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399710	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399586
ES.11573.58	chr15	-	3796	17	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	287	intron_retention	FALSE	non_canonical	0	0	junction_1	796.239795852983	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399707	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.6	chr15	-	2597	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	760.204764488238	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACCTCTGTCCTCACGG	NA	False	NA	-4	True	AATAAA	-19	NA	11399707	11383744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392878_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.60	chr15	-	2635	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	30	287	intron_retention	FALSE	canonical	3	2899	junction_10	129.12058150223	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399721	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.61	chr15	-	2382	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-25	287	combination_of_known_splicesites	FALSE	canonical	1	27	junction_8	773.926621343983	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399712	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.62	chr15	-	4984	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	24	287	intron_retention	FALSE	canonical	3	2899	junction_6	236.631343775804	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399727	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.64	chr15	-	3983	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-23	287	intron_retention	FALSE	canonical	3	2899	junction_6	239.410639031837	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399710	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.65	chr15	-	4563	18	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	11	287	intron_retention	FALSE	non_canonical	0	0	junction_1	777.679589067757	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399740	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.66	chr15	-	2549	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-19	287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	759.402250311242	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399706	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385291_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.67	chr15	-	2925	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	287	intron_retention	FALSE	canonical	3	2899	junction_8	224.656369540238	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399707	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.69	chr15	-	4250	16	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	31	287	intron_retention	FALSE	canonical	3	2945	junction_11	214.680682772241	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399720	11383803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11391979_11392055_11392121_11392317_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.7	chr15	-	4508	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-5	345	intron_retention	FALSE	canonical	3	2945	junction_9	114.196684072092	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399692	11383745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11391294_11391899_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.72	chr15	-	7151	13	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-23	286	intron_retention	FALSE	canonical	3	2945	junction_7	246.006930232102	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAAGGAGAAAACAGAGT	NA	False	NA	-22	True	AATAAA	-15	NA	11399710	11383804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11387211_11387348_11387454_11387557_11387659_11387786_11389829_11390397_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.73	chr15	-	2810	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	24	285	intron_retention	FALSE	canonical	3	2899	junction_10	221.311316841091	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGGAGAAAACAGAG	NA	False	NA	-23	True	AATAAA	-14	NA	11399727	11383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.74	chr15	-	5213	16	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	-20	285	intron_retention	FALSE	non_canonical	0	0	junction_1	824.82013123401	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGGAGAAAACAGAG	NA	False	NA	-23	True	AATAAA	-14	NA	11399707	11383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.75	chr15	-	7177	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	19	285	intron_retention	FALSE	canonical	3	2945	junction_10	227.91835272791	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGGAGAAAACAGAG	NA	False	NA	-23	True	AATAAA	-14	NA	11399732	11383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11397348_11399571
ES.11573.76	chr15	-	5014	15	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	285	intron_retention	FALSE	canonical	3	2945	junction_9	228.119150749724	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGGAGAAAACAGAG	NA	False	NA	-23	True	AATAAA	-14	NA	11399729	11383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.77	chr15	-	3677	17	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	14	285	intron_retention	FALSE	non_canonical	0	0	junction_9	798.429412874895	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAGGAGAAAACAGAG	6	False	11399679	-23	True	AATAAA	-14	NA	11399673	11383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391294_11391924_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.78	chr15	-	2546	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	22	282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1014.38929660251	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGTCTAAGGAGAAAACA	NA	False	NA	-26	True	AATAAA	-11	NA	11399729	11383808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385177_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388298_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.79	chr15	-	2489	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	21	1495	21	209	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGGGATGTTTTATG	NA	False	NA	-39	True	ATTAAA	-27	NA	11399730	11383881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11573.8	chr15	-	4614	6	NNC	ENSMUSG00000022241.7	novel	859	6	NA	NA	590	345	intron_retention	FALSE	non_canonical	0	0	junction_2	1279.07106917481	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	8185	False	NA	-5	True	AATAAA	-18	NA	11391494	11383745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384246_11385169_11385297_11387137_11387211_11387348_11387454_11387557_11387659_11387786
ES.11573.9	chr15	-	7128	9	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	25	345	intron_retention	FALSE	non_canonical	0	0	junction_1	1036.96316683622	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399726	11383745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11384634_11384686_11385285_11387137_11389829_11390397_11392121_11392317_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ES.11574.1	chr15	-	174	1	Intergenic	novelGene_9643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAATTAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	11471889	11471715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_11471700_11471900
ES.11575.1	chr15	-	4352	1	NIC	ENSMUSG00000115076.2	novel	312	3	NA	NA	22	36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGCTGTAAATTGACAAT	NA	False	NA	NA	False	AATAAA	-17	NA	11630804	11626452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11626500_11630800
ES.11576.1	chr15	+	168	1	Intergenic	novelGene_9644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCACATCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	11726853	11727021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_11726900_11727000
ES.11577.1	chr15	-	6934	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	-42	0	-7	0	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCCTGTCTATAATTC	1438	False	NA	-1	True	ATTAAA	-18	NA	11905767	11839981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.12	chr15	-	1848	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	4	585	4	-585	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACGCAATGCTGTTAA	1449	False	NA	NA	False	AATATA	-4	NA	11905756	11845053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.3	chr15	-	6234	5	NIC	ENSMUSG00000022206.8	novel	6892	8	NA	NA	336	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	14.4048602908879	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTTCCTGTCTATAA	1816	False	NA	-4	True	ATTAAA	-15	NA	11905389	11839984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11845375_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.4	chr15	-	6431	8	NIC	ENSMUSG00000022206.8	novel	1969	9	NA	NA	-84	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	10.9897911810954	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGTTTCCTGTCTAT	NA	False	NA	-6	True	ATTAAA	-13	NA	11907457	11839986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11907156
ES.11577.5	chr15	-	6540	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	241	-4344	206	-143	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGTCATTTAAGCAA	1686	False	NA	NA	False	NA	NA	NA	11905519	11840124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.6	chr15	-	3800	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	87	-1450	52	-673	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCCTGGAGTCATTTCC	1532	False	NA	NA	False	AATAAA	-19	NA	11905673	11843018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.7	chr15	-	2461	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	-56	4487	-21	0	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	1424	False	NA	NA	False	ATTAAA	-22	NA	11905781	11844468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ES.11577.8	chr15	-	2037	8	NIC	ENSMUSG00000022206.8	novel	1969	9	NA	NA	-169	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	11.4481974340852	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	NA	False	NA	NA	False	ATTAAA	-22	NA	11907542	11844468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11907156
ES.11577.9	chr15	-	1916	8	ISM	ENSMUSG00000022206.8	ENSMUST00000228489.2	1969	9	406	0	320	0	3prime_fragment	FALSE	canonical	1	1	junction_7	10.9897911810954	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	238	False	NA	NA	False	ATTAAA	-22	NA	11906967	11844468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11906699
ES.11578.1	chr15	-	2980	1	Intergenic	novelGene_9645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11974376	11971396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_11971400_11974400
ES.11578.2	chr15	-	221	1	Intergenic	novelGene_9646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAAAACGGATGGGAAAG	NA	False	NA	NA	False	AAAAAG	-14	NA	11971892	11971671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_11971700_11971900
ES.11579.1	chr15	-	6502	2	ISM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	6063	-3	5755	3	3prime_fragment	FALSE	canonical	3	7728	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGTTATCCCATGT	6872	False	NA	NA	False	AATAAA	-14	NA	11990081	11981421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_11984384_11986541
ES.11579.10	chr15	-	673	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	9	64	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_3	3385.52362087462	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTACCCTTTTTTG	864	False	NA	77	True	AATAAA	-20	NA	11996089	11984062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11984384_11986541_11986651_11991044_11991162_11993874_11993948_11996036
ES.11579.13	chr15	-	2770	4	ISM	ENSMUSG00000022205.16	ENSMUST00000110504.2	675	5	978	-64	7	64	3prime_fragment	FALSE	canonical	3	7728	junction_1	254.309959607475	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTACCCTTTTTTG	862	False	NA	77	True	AATAAA	-20	NA	11996091	11984062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874
ES.11579.15	chr15	-	522	4	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	9	63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3677.90967202235	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGGTACCCTTTTTT	864	False	NA	76	True	AATAAA	-19	NA	11996089	11984063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11984384_11986541_11986618_11993874_11993948_11996036
ES.11579.17	chr15	-	554	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	55	2763	9	-61	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTTTTTTAATGTG	864	False	NA	-48	True	NA	NA	NA	11996089	11984187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ES.11579.2	chr15	-	3323	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	52	-3	6	3	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGTTATCCCATGT	861	False	NA	NA	False	AATAAA	-14	NA	11996092	11981421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ES.11579.4	chr15	-	2726	6	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	6	-16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3915.91003982471	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAGAAACACAC	861	False	NA	NA	False	AATGAA	-35	NA	11996092	11981440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_11982533_11983114_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996032
ES.11579.6	chr15	-	5078	4	NIC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	6	66	intron_retention	FALSE	canonical	3	7728	junction_1	257.772940567642	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	861	False	NA	79	True	AATAAA	-22	NA	11996092	11984060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_11984384_11986541_11991168_11993874_11993948_11996036
ES.11579.7	chr15	-	735	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	0	2637	0	65	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTACCCTTTTTTGA	809	False	NA	78	True	AATAAA	-21	NA	11996144	11984061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ES.11579.9	chr15	-	2839	4	FSM	ENSMUSG00000022205.16	ENSMUST00000129533.8	689	4	7	-2157	7	64	multi-exon	FALSE	canonical	3	7874	junction_3	189.203594046202	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTACCCTTTTTTG	862	False	NA	77	True	AATAAA	-20	NA	11996091	11984062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_11986651_11991044_11991168_11993874_11993948_11996036
ES.1158.1	chr1	+	167	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAGAAATATTA	NA	False	NA	NA	False	NA	NA	NA	113451359	113451526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_113451400_113451500
ES.11580.1	chr15	+	2377	1	Intergenic	novelGene_9647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATCACACACAAACCAATA	NA	False	NA	NA	False	AATAGA	-31	NA	12028776	12031153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12028800_12031200
ES.11581.1	chr15	-	1167	2	Genic_Genomic	ENSMUSG00000107344.2	novel	363	1	NA	NA	-4844	620	multi-exon	FALSE	canonical	2	12	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATGAAAAGGAG	NA	False	NA	NA	False	AATAAA	-11	NA	12036857	12031030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_12032054_12036713
ES.11581.2	chr15	-	1700	2	Genic_Genomic	ENSMUSG00000107344.2	novel	363	1	NA	NA	-5366	620	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATGAAAAGGAG	NA	False	NA	NA	False	AATAAA	-11	NA	12037379	12031030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_12032054_12036702
ES.11581.3	chr15	-	1099	2	Genic_Genomic	ENSMUSG00000107344.2	novel	363	1	NA	NA	-705	620	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATGAAAAGGAG	NA	False	NA	NA	False	AATAAA	-11	NA	12032718	12031030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_12032054_12032642
ES.11582.1	chr15	+	4635	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-207	-230	combination_of_known_splicesites	TRUE	canonical	1	10	junction_6	165.91817111508	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	111	False	NA	22	True	AATAAA	-22	NA	12117709	12185539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.10	chr15	+	4636	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-30	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	162.785381199941	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	10	True	NA	13	True	AATAAA	-13	NA	12117886	12185530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12170990_12171839_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.100	chr15	+	2466	1	Intergenic	novelGene_9649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTACTTCTTCTCCAT	5777	False	NA	NA	False	NA	NA	NA	12128636	12131102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12128600_12131100
ES.11582.101	chr15	+	3657	2	Intergenic	novelGene_9651	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGAACGTCATATCC	462	False	NA	NA	False	AATAAA	-2	NA	12129970	12135093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12130619_12132084
ES.11582.102	chr15	+	226	1	Intergenic	novelGene_9652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGTGCTCTGTGCAGG	3177	False	NA	NA	False	AGTAAA	-27	NA	12139755	12139981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12139800_12140000
ES.11582.103	chr15	+	3481	13	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-13459	-232	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	229.066705471475	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTGTGTTATGTGGT	67	False	NA	20	True	AATAAA	-20	NA	12146246	12185537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.104	chr15	+	180	1	Intergenic	novelGene_9653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	697	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTTAGCAGCT	1552	False	NA	NA	False	NA	NA	NA	12147832	12148012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12147800_12148000
ES.11582.105	chr15	+	8805	7	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-904	-243	intron_retention	FALSE	canonical	3	577	junction_2	17.1018192664471	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTAATGACTTACTTG	9488	False	NA	9	True	AATAAA	-9	NA	12158801	12185526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12159848_12160570_12160777_12162199_12162351_12166230_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.106	chr15	+	6387	2	NNC	ENSMUSG00000022201.17	novel	666	2	NA	NA	440	69234	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTAGCCGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	12166684	12255003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12173035_12254966
ES.11582.107	chr15	+	5497	2	NNC	ENSMUSG00000022201.17	novel	666	2	NA	NA	1814	1652	intron_retention	FALSE	canonical	0	0	junction_1	0	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACTGAATATACATACAA	NA	False	NA	NA	False	NA	NA	NA	12168058	12187421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12173367_12187232
ES.11582.108	chr15	+	4573	5	NNC	ENSMUSG00000022201.17	novel	897	8	NA	NA	1975	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.332541042051	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	NA	False	NA	13	True	AATAAA	-13	NA	12168219	12185530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12171000_12171843_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.109	chr15	+	1189	4	ISM	ENSMUSG00000022201.17	ENSMUST00000157034.8	939	5	5222	0	1105	0	3prime_fragment	FALSE	canonical	3	607	junction_1	10.8012344973464	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGATTTGTGCTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	12171466	12184549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.11	chr15	+	4540	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-22	-232	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTGTGTTATGTGGT	18	True	NA	20	True	AATAAA	-20	NA	12117894	12185537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.110	chr15	+	5512	1	Genic_Genomic	ENSMUSG00000022201.17	novel	NA	NA	NA	NA	2192	1652	mono-exon	FALSE	NA	NA	NA	NA	NA	712	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACTGAATATACATACAA	2182	False	NA	NA	False	NA	NA	NA	12181909	12187421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_12181900_12187400
ES.11582.111	chr15	+	4435	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-89	2494	-89	8	multi-exon	TRUE	canonical	3	174	junction_5	33.0552399611452	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGAAGTGTCTGTTAA	0	True	NA	36	True	ATTAAA	-39	NA	12205024	12272088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.112	chr15	+	4665	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-78	2253	-78	3	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTGTGCACGGTCTG	11	True	NA	12	True	ATTAAA	-23	NA	12205035	12272329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.114	chr15	+	4381	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-143	121	-67	4	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTTTGGAAGTGTCTG	22	False	NA	32	True	ATTAAA	-35	NA	12205046	12272084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.115	chr15	+	4620	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-139	-122	-63	1	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTGGTGTGCACGGTC	-6	True	NA	10	True	ATTAAA	-21	NA	12205050	12272327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.117	chr15	+	4393	15	NIC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-28	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	86.2561444129031	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTAGACTGAGTCAGCTT	-8	True	NA	NA	False	ATTAAA	-24	NA	12205085	12272208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.118	chr15	+	4501	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-25	2364	-25	13	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGCTTCACTGTGCAG	-5	True	NA	-99	True	ATTAAA	-34	NA	12205088	12272218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.119	chr15	+	4240	17	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.1499902546771	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	-2	True	NA	21	True	ATTAAA	-24	NA	12205091	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205197_12205309_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.121	chr15	+	4462	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-97	-6	-21	6	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGAGTCAGCTTCAC	-1	True	NA	NA	False	ATTAAA	-27	NA	12205092	12272211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.122	chr15	+	4128	14	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	75.3737825811583	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTGTGCAAGTTTGGAA	5	True	NA	25	True	ATTAAA	-28	NA	12205098	12272077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.123	chr15	+	4467	17	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.3802434235806	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTGTGCAAGTTTGGA	8	True	NA	24	True	ATTAAA	-27	NA	12205101	12272076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12230523_12230645_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.124	chr15	+	4317	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	99.2838803073736	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACACACTGTGCAAGT	8	True	NA	19	True	ATTAAA	-22	NA	12205101	12272071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245060_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266697_12266855_12269587
ES.11582.125	chr15	+	4449	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-12	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.0961354641223	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGAGTCAGCTTCAC	8	True	NA	NA	False	ATTAAA	-27	NA	12205101	12272211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232972_12233927_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.126	chr15	+	3665	8	FSM	ENSMUSG00000039458.16	ENSMUST00000071993.13	3351	8	-69	-245	-12	-1	multi-exon	FALSE	canonical	0	0	junction_2	94.4772945403999	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTGGTGTGCACGG	8	True	NA	8	True	ATTAAA	-19	NA	12205101	12272325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12259704_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.127	chr15	+	3111	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-12	3741	-12	-1239	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCTTCCACAGGGGAG	8	True	NA	NA	False	ATTAAA	-13	NA	12205101	12270841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.129	chr15	+	4174	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-11	-7	combination_of_known_splicesites	FALSE	canonical	3	13	junction_13	73.1399622753024	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	9	True	NA	21	True	ATTAAA	-24	NA	12205102	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12266692_12266855_12269587
ES.11582.131	chr15	+	4272	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	75.2973696589132	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGCAAGTTTGGAAG	11	True	NA	26	True	ATTAAA	-29	NA	12205104	12272078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.132	chr15	+	2052	16	NNC	ENSMUSG00000039458.16	novel	4489	16	NA	NA	-8	-4395	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_15	93.4093499959542	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGAGTGACAAGCATTG	12	True	NA	NA	False	AATAAA	-8	NA	12205105	12267685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266697_12266855_12267481
ES.11582.134	chr15	+	2239	15	ISM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-6	7340	-6	-4838	5prime_fragment	FALSE	canonical	3	174	junction_5	32.4575861388241	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCATCTGTATTTTATC	14	True	NA	NA	False	AATAAA	-15	NA	12205107	12267242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692
ES.11582.135	chr15	+	4420	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_13	73.1399622753024	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGGTTGGTGTGCACG	14	True	NA	7	True	ATTAAA	-18	NA	12205107	12272324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12266692_12266855_12269587
ES.11582.136	chr15	+	4511	17	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	93.8981953700389	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTGTGCAAGTTTGGAA	14	True	NA	25	True	ATTAAA	-28	NA	12205107	12272077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12246662_12246833_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.137	chr15	+	4995	15	NIC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	72	junction_5	56.2387857302073	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGCAAGTTTGGAAG	17	True	NA	26	True	ATTAAA	-29	NA	12205110	12272078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.138	chr15	+	4168	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	-2	2674	-2	-172	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCTGTGTGGTTATGA	18	True	NA	NA	False	AGTAAA	-9	NA	12205111	12271908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.139	chr15	+	4504	16	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	73.6161214227789	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCATGGTTGGTGTGCAC	18	True	NA	6	True	ATTAAA	-17	NA	12205111	12272323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258582_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.140	chr15	+	4508	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	75.2973696589132	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCATGGTTGGTGTGCAC	20	True	NA	6	True	ATTAAA	-17	NA	12205113	12272323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.141	chr15	+	4319	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.1026569633535	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAGTTTGGAAGTGT	21	True	NA	29	True	ATTAAA	-32	NA	12205114	12272081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236094_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.144	chr15	+	3361	14	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-25	-723	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	75.3737825811583	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTTCTGATTGCACT	4	True	NA	NA	False	NA	NA	NA	12205145	12271357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.147	chr15	+	6683	14	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-6	-722	intron_retention	TRUE	non_canonical	0	0	junction_12	78.1417313444922	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTCTGATTGCACTG	23	False	NA	NA	False	NA	NA	NA	12205164	12271358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12261998_12263810_12265129_12265235_12266855_12269587
ES.11582.148	chr15	+	3560	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	52	3228	-5	-726	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCCTTTCTGATTGC	24	False	NA	NA	False	NA	NA	NA	12205165	12271354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.149	chr15	+	4513	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.7851750344627	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCGCCATGGTTGGTG	26	False	NA	1	True	ATTAAA	-12	NA	12205167	12272318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245050_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.151	chr15	+	4468	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.4268465711876	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTTGGTGTGCACGGT	27	False	NA	9	True	ATTAAA	-20	NA	12205168	12272326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.152	chr15	+	3481	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	-2	-729	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	75.2973696589132	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAAGAATCCTTTCTGAT	27	False	NA	NA	False	NA	NA	NA	12205168	12271351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.153	chr15	+	6765	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-19	-2387	0	10	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGCCTTTGAGTCCTA	29	False	NA	NA	False	AATAAA	-25	NA	12205170	12274592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.154	chr15	+	4081	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	-18	296	1	-171	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTGGTTATGAC	30	False	NA	NA	False	AGTAAA	-10	NA	12205171	12271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.155	chr15	+	7017	14	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	4	-3	intron_retention	FALSE	canonical	3	174	junction_5	34.9958577430472	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCATGGTTGGTGTGCAC	33	False	NA	6	True	ATTAAA	-17	NA	12205174	12272323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.157	chr15	+	5291	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	5	-5	intron_retention	FALSE	canonical	3	174	junction_5	33.3356461782646	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAAGCTATTAGACTGA	34	False	NA	NA	False	ATTAAA	-16	NA	12205175	12272200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12266855_12269587
ES.11582.158	chr15	+	4144	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	75.644610798504	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGCAAGTTTGGAAG	34	False	NA	26	True	ATTAAA	-29	NA	12205175	12272078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.159	chr15	+	4241	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.7851750344627	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGCAAGTTTGGAAG	35	False	NA	26	True	ATTAAA	-29	NA	12205176	12272078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230425_12232849_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.16	chr15	+	3658	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-11	1203	-11	17	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCTGTGTATTTT	29	False	NA	NA	False	ATTAAA	-32	NA	12117905	12184566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.161	chr15	+	4221	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.6200921767402	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAGTTTGGAAGTGT	46	False	NA	29	True	ATTAAA	-32	NA	12205187	12272081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205350_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.162	chr15	+	4931	15	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_9	76.4131159272692	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	49	False	NA	21	True	ATTAAA	-24	NA	12205190	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259660_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.163	chr15	+	4938	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	1	-7	intron_retention	FALSE	canonical	3	174	junction_5	33.7249529129336	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	49	False	NA	21	True	ATTAAA	-24	NA	12205190	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.164	chr15	+	4150	15	NIC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	86.2561444129031	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	52	False	NA	21	True	ATTAAA	-24	NA	12205193	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.165	chr15	+	5414	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	11	-1066	-3	945	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGTGTTAGATATGT	59	False	NA	NA	False	NA	NA	NA	12205200	12273271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.166	chr15	+	3309	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	102	3429	12	-927	multi-exon	FALSE	canonical	3	174	junction_5	33.0552399611452	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCTTTGTAAGGCTCAG	74	False	NA	NA	False	NA	NA	NA	12205215	12271153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.168	chr15	+	4686	13	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	19	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	102.13971232255	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	81	False	NA	21	True	ATTAAA	-24	NA	12205222	12272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230423_12232841_12232988_12233939_12234013_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.17	chr15	+	4620	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	-230	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	198.774110020406	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	29	False	NA	22	True	AATAAA	-22	NA	12117905	12185539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146249_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154656_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.171	chr15	+	3475	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	37	847	23	-722	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTCTGATTGCACTG	85	False	NA	NA	False	NA	NA	NA	12205226	12271358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.172	chr15	+	4357	16	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.1528151859388	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGACTGAGTCAGCT	86	False	NA	NA	False	ATTAAA	-23	NA	12205227	12272207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205372_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.173	chr15	+	4277	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	25	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	75.2973696589132	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGACTGAGTCAGCT	87	False	NA	NA	False	ATTAAA	-23	NA	12205228	12272207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.174	chr15	+	4187	16	NNC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	84.8825593917201	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGCAAGTTTGGAAG	101	False	NA	26	True	ATTAAA	-29	NA	12205242	12272078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12262006_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.175	chr15	+	4209	16	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	47	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	74.496413038183	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAGTTTGGAAGTGT	109	False	NA	29	True	ATTAAA	-32	NA	12205250	12272081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234020_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.176	chr15	+	4505	16	NNC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	274	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	70.8197712506896	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGCAAGTTTGGAAGT	336	False	NA	27	True	ATTAAA	-30	NA	12205477	12272079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12205898_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.177	chr15	+	4203	15	ISM	ENSMUSG00000039458.16	ENSMUST00000174160.3	4489	16	25155	125	6919	-4	3prime_fragment	FALSE	canonical	3	15	junction_13	72.2214917981553	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAGCTATTAGACTGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	12230358	12272201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266697_12266855_12269587
ES.11582.178	chr15	+	4770	13	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	9478	12	intron_retention	FALSE	canonical	3	174	junction_3	34.6509379382435	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAGCTTCACTGTGCA	2435	False	NA	NA	False	ATTAAA	-33	NA	12232917	12272217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.179	chr15	+	6440	8	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	27071	-1	intron_retention	FALSE	canonical	3	228	junction_7	24.5165500119775	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTTGGTGTGCACGG	1708	False	NA	8	True	ATTAAA	-19	NA	12250510	12272325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.18	chr15	+	4534	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	-229	combination_of_known_junctions	FALSE	canonical	1	32	junction_15	161.528195757556	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTATGTGGTAGG	29	False	NA	23	True	AATAAA	-23	NA	12117905	12185540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.180	chr15	+	1898	2	ISM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	45891	13029	27641	-12904	intron_retention	FALSE	canonical	3	299	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACATTCCAACTAC	2278	False	NA	NA	False	NA	NA	NA	12251080	12259176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12251515_12257712
ES.11582.181	chr15	+	3790	9	ISM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	46156	-118	27906	-3	3prime_fragment	FALSE	canonical	3	228	junction_8	22.9401394939089	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCATGGTTGGTGTGCAC	2543	False	NA	6	True	ATTAAA	-17	NA	12251345	12272323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ES.11582.182	chr15	+	7030	1	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	28707	-12904	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACATTCCAACTAC	3344	False	NA	NA	False	NA	NA	NA	12252146	12259176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12252100_12259200
ES.11582.183	chr15	+	2691	1	Genic_Genomic	ENSMUSG00000039458.16	novel	NA	NA	NA	NA	50434	1982	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	12273873	12276564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_12273900_12276600
ES.11582.2	chr15	+	4447	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-94	-232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.478261916996	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTGTGTTATGTGGT	-7	True	NA	20	True	AATAAA	-20	NA	12117822	12185537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118366_12136687_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.20	chr15	+	3610	18	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	207.343854619429	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTGTTTCTGCAGAT	29	False	NA	NA	False	TATAAA	-27	NA	12117905	12184779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.21	chr15	+	4628	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	226.587401272693	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	29	False	NA	12	True	AATAAA	-12	NA	12117905	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12176626_12176734_12180707_12180820_12180928_12181027_12184044
ES.11582.22	chr15	+	4545	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	-242	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	159.146407271319	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAATGACTTACTTGT	29	False	NA	10	True	AATAAA	-10	NA	12117905	12185527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12117960_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.23	chr15	+	9148	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-11	-242	intron_retention	FALSE	canonical	1	184	junction_8	104.90055549524	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAATGACTTACTTGT	29	False	NA	10	True	AATAAA	-10	NA	12117905	12185527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.25	chr15	+	4578	21	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-10	-237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	159.317379780111	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTACTTGTGTTAT	30	False	NA	15	True	AATAAA	-15	NA	12117906	12185532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138060_12138104_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.26	chr15	+	3867	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-10	993	-10	227	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATAGCTGTTTCTGCA	30	False	NA	NA	False	TATAAA	-24	NA	12117906	12184776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.28	chr15	+	4453	20	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-10	-239	combination_of_known_splicesites	FALSE	canonical	1	10	junction_7	219.72141767484	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	30	False	NA	13	True	AATAAA	-13	NA	12117906	12185530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.29	chr15	+	4138	18	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-10	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.80879214217	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	30	False	NA	13	True	AATAAA	-13	NA	12117906	12185530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12138090_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.3	chr15	+	4683	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-40	-231	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTGTGTTATGTGGTA	0	True	NA	21	True	AATAAA	-21	NA	12117876	12185538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.30	chr15	+	4583	21	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-10	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	212.732525721856	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	30	False	NA	12	True	AATAAA	-12	NA	12117906	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140755_12146311_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.33	chr15	+	4648	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-8	-231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.478261916996	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTGTGTTATGTGGTA	32	False	NA	21	True	AATAAA	-21	NA	12117908	12185538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136460_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.34	chr15	+	3536	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	1	32	junction_15	161.528195757556	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGATTTGTGCTTCAGT	38	False	NA	NA	False	ATTAAA	-17	NA	12117914	12184551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.36	chr15	+	4345	19	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	165.205595815907	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	40	False	NA	18	True	AATAAA	-18	NA	12117916	12185535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12117985_12136603_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.37	chr15	+	9983	18	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-240	intron_retention	FALSE	canonical	1	184	junction_8	107.615360167332	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	41	False	NA	12	True	AATAAA	-12	NA	12117917	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.38	chr15	+	3649	21	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	231.837933695071	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACAGGATTTGTGCTTC	41	False	NA	NA	False	ATTAAA	-14	NA	12117917	12184548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150550_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162201_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.39	chr15	+	4658	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	10	junction_6	165.91817111508	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTATATTATCTGT	41	False	NA	NA	False	AATACA	-18	NA	12117917	12185770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.40	chr15	+	4312	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-240	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	201.67309880389	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	41	False	NA	12	True	AATAAA	-12	NA	12117917	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118387_12136744_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154656_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.41	chr15	+	3901	18	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-240	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	217.096218682155	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	41	False	NA	12	True	AATAAA	-12	NA	12117917	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.42	chr15	+	1061	5	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	920	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	286.718067097279	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGATTGATTCTTTGT	41	False	NA	NA	False	AATAAA	-15	NA	12117917	12150556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12150258
ES.11582.43	chr15	+	389	3	NNC	ENSMUSG00000022201.17	novel	513	3	NA	NA	1	-156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.5	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGCAGAAATACAACCT	41	False	NA	NA	False	AATAAA	-21	NA	12117917	12122267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12122094
ES.11582.44	chr15	+	4678	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.924369336556	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	41	False	NA	18	True	AATAAA	-18	NA	12117917	12185535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118261_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.49	chr15	+	4491	19	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	2	-240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	228.336530120904	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	42	False	NA	12	True	AATAAA	-12	NA	12117918	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146249_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166371_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.5	chr15	+	4735	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-33	148	-33	-148	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTATGTGTATATGTGTT	7	True	NA	104	True	NA	NA	NA	12117883	12185621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.50	chr15	+	3534	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCTTCAGTTGCTC	43	False	NA	NA	False	ATTAAA	-22	NA	12117919	12184556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.53	chr15	+	4619	20	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	7	-239	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	163.250228542301	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGACTTACTTGTGTT	47	False	NA	13	True	AATAAA	-13	NA	12117923	12185530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162184_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.54	chr15	+	4411	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	8	431	8	-431	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAACAGAA	48	False	NA	NA	False	GATAAA	-32	NA	12117924	12185338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.56	chr15	+	617	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	-27	-77	8	77	multi-exon	FALSE	canonical	3	26	junction_2	305.5	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCATTTGGAAACAT	48	False	NA	NA	False	AATAAA	-11	NA	12117924	12122500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12122092
ES.11582.57	chr15	+	2648	14	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	8	101	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	184.855708962679	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTGTTTTCCATTTCC	48	False	NA	NA	False	ATTAAA	-18	NA	12117924	12166407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230
ES.11582.58	chr15	+	3730	16	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	8	-242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.550056172655	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAATGACTTACTTGT	48	False	NA	10	True	AATAAA	-10	NA	12117924	12185527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12117976_12146299_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.6	chr15	+	4635	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-32	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.924369336556	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	8	True	NA	12	True	AATAAA	-12	NA	12117884	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118331_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.61	chr15	+	4573	1	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-9	77	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCATTTGGAAACAT	51	False	NA	NA	False	AATAAA	-11	NA	12117927	12122500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12117900_12122500
ES.11582.62	chr15	+	2745	15	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	11	19362	-9	101	5prime_fragment	FALSE	canonical	1	184	junction_8	115.967469928565	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTGTTTTCCATTTCC	51	False	NA	NA	False	ATTAAA	-18	NA	12117927	12166407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230
ES.11582.63	chr15	+	4905	5	ISM	ENSMUSG00000022201.17	ENSMUST00000128475.9	1115	7	-6	4843	-6	-1509	5prime_fragment	FALSE	canonical	3	539	junction_4	37.3187285421141	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATTTTTCTTAAGACC	54	False	NA	NA	False	AATAAA	-13	NA	12117930	12144793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519
ES.11582.64	chr15	+	4834	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	16	0	-4	0	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	56	False	NA	NA	False	AATACA	-17	NA	12117932	12185769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.65	chr15	+	4252	18	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-4	-234	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	201.864029745743	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	56	False	NA	18	True	AATAAA	-18	NA	12117932	12185535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.68	chr15	+	4742	22	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	216.340539485653	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTATGTGGTAG	61	False	NA	22	True	AATAAA	-22	NA	12117937	12185539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12127397_12127517_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.7	chr15	+	4907	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-32	1	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTATATTATCTGT	8	True	NA	NA	False	AATACA	-18	NA	12117884	12185770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.70	chr15	+	4339	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	1	-242	combination_of_known_splicesites	FALSE	canonical	1	26	junction_5	160.332948332486	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAATGACTTACTTGT	61	False	NA	10	True	AATAAA	-10	NA	12117937	12185527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.73	chr15	+	1013	6	ISM	ENSMUSG00000022201.17	ENSMUST00000128475.9	1115	7	7	3226	-1	108	5prime_fragment	FALSE	canonical	3	539	junction_4	43.3755691605309	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAACAGCCTCCCAAACC	67	False	NA	NA	False	AATAAA	-10	NA	12117943	12146410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234
ES.11582.74	chr15	+	3544	15	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	1180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	180.543397462624	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCGTTTGTATGAAC	67	False	NA	NA	False	AATACA	-11	NA	12117943	12167486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140565_12146324_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230
ES.11582.75	chr15	+	4255	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	-236	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	217.851279673546	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTACTTGTGTTATG	67	False	NA	16	True	AATAAA	-16	NA	12117943	12185533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138064_12146299_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.77	chr15	+	3621	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.478261916996	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGATTTGTGCTTCA	67	False	NA	NA	False	ATTAAA	-15	NA	12117943	12184549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136463_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.79	chr15	+	3961	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	140.040971448396	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTTAAAGCCTCTGC	67	False	NA	NA	False	TATAAA	-27	NA	12117943	12184926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150523_12152877_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.8	chr15	+	3912	17	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-32	-238	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	149.859400251536	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTACTTGTGTTA	8	True	NA	14	True	AATAAA	-14	NA	12117884	12185531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.80	chr15	+	5481	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	758	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAAGTTGGCTTTATCT	67	False	NA	NA	False	NA	NA	NA	12117943	12186527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.82	chr15	+	4526	17	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	-242	intron_retention	FALSE	canonical	1	26	junction_4	204.762018878014	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAATGACTTACTTGT	67	False	NA	10	True	AATAAA	-10	NA	12117943	12185527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.84	chr15	+	4391	18	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	-1	-234	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	203.665085687331	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	67	False	NA	18	True	AATAAA	-18	NA	12117943	12185535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.87	chr15	+	3840	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	2	216	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGTGCTCAGAAATAG	70	False	NA	NA	False	TATAAA	-13	NA	12117946	12184765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.89	chr15	+	3896	19	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	6	406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	200.144800976755	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGCATGACATTTT	81	False	NA	NA	False	TTTAAA	-18	NA	12117957	12184955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146233_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.9	chr15	+	4045	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	-32	837	-32	383	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGCCTCTGCATAATT	8	True	NA	NA	False	TATAAA	-33	NA	12117884	12184932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.91	chr15	+	4196	19	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	20	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	165.016918324556	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTACTTGTGTTATG	95	False	NA	16	True	AATAAA	-16	NA	12117971	12185533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138057_12146299_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.92	chr15	+	8483	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	20	379	intron_retention	FALSE	canonical	1	184	junction_8	104.90055549524	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTAAAGCCTCTGCAT	95	False	NA	NA	False	TATAAA	-29	NA	12117971	12184928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.93	chr15	+	4493	20	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	20	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	160.617954861288	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGACTTACTTGTGT	95	False	NA	12	True	AATAAA	-12	NA	12117971	12185529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146296_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.94	chr15	+	4723	19	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	184	234	149	-234	3prime_fragment	FALSE	canonical	1	184	junction_7	103.709530259599	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	47	False	NA	18	True	AATAAA	-18	NA	12118100	12185535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.96	chr15	+	4753	19	NNC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	179	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	227.310822172072	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTACTTGTGTTATGTGG	77	False	NA	19	True	AATAAA	-19	NA	12118130	12185536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12144333_12144491_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.97	chr15	+	4673	20	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	220	-237	combination_of_known_splicesites	FALSE	canonical	1	46	junction_2	187.796185270671	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTACTTGTGTTAT	118	False	NA	15	True	AATAAA	-15	NA	12118171	12185532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ES.11582.98	chr15	+	1415	7	ISM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	474	35217	439	916	internal_fragment	FALSE	canonical	3	539	junction_3	44.6056797579262	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACTAAAGATTGATTCT	337	False	NA	NA	False	AATAAA	-11	NA	12118390	12150552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258
ES.11582.99	chr15	+	5298	2	Intergenic	novelGene_9648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGAACGTCATATCC	2576	False	NA	NA	False	AATAAA	-2	NA	12125435	12135093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12125510_12129869
ES.11583.1	chr15	-	4429	1	Intergenic	novelGene_9650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12129600_12134000
ES.11583.2	chr15	-	3272	2	Antisense	novelGene_ENSMUSG00000022201.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12130934_12132090
ES.11583.3	chr15	-	3280	2	Antisense	novelGene_ENSMUSG00000022201.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12130931_12132079
ES.11583.4	chr15	-	2963	2	Antisense	novelGene_ENSMUSG00000022201.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12130620_12132085
ES.11583.5	chr15	-	3220	2	Antisense	novelGene_ENSMUSG00000022201.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12130872_12132080
ES.11584.1	chr15	-	204	1	Intergenic	novelGene_9654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAACGTGGAATCTACT	NA	False	NA	NA	False	NA	NA	NA	12203623	12203419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12203400_12203600
ES.11585.1	chr15	-	177	1	Intergenic	novelGene_9655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTTTGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	12229706	12229529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12229500_12229700
ES.11586.1	chr15	-	6885	1	Antisense	novelGene_ENSMUSG00000039458.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTTGAGTTAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	12241268	12234383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12234400_12241300
ES.11587.1	chr15	-	9322	1	Antisense	novelGene_ENSMUSG00000039458.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATGTGTATGAGTGT	NA	False	NA	NA	False	NA	NA	NA	12258181	12248859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12248900_12258200
ES.11587.2	chr15	-	3849	3	Antisense	novelGene_ENSMUSG00000039458.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATGTGTATGAGTGT	NA	False	NA	NA	False	NA	NA	NA	12259931	12248859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12251515_12257712_12258627_12259651
ES.11588.1	chr15	+	143	1	Intergenic	novelGene_9656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12301171	12301314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12301200_12301300
ES.11589.1	chr15	-	181	1	Intergenic	novelGene_9657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAACAAAGT	NA	False	NA	NA	False	NA	NA	NA	12310082	12309901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12309900_12310100
ES.1159.1	chr1	+	4271	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCAGTAACATTAACAC	NA	False	NA	NA	False	NA	NA	NA	113886496	113890767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_113886500_113890800
ES.1159.2	chr1	+	3788	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCAAGCAATTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	113886496	113890284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_113886500_113890300
ES.11590.1	chr15	-	177	1	Intergenic	novelGene_9658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAGAGAGAGAGAGAGA	4458	False	NA	NA	False	NA	NA	NA	12316860	12316683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12316700_12316900
ES.11591.1	chr15	+	3045	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	-53	-340	-53	14	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTATGAGTGTTTTTCC	1	True	NA	25	True	AATAAA	-27	NA	12321482	12351691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ES.11591.10	chr15	+	2765	5	NNC	ENSMUSG00000022200.9	novel	2842	5	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.50870052042	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCAAGCATGCCATTT	26	False	NA	20	True	AATAAA	-28	NA	12321566	12351353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12322043_12327656_12327799_12339713_12339846_12343122_12343238_12349453
ES.11591.2	chr15	+	815	4	FSM	ENSMUSG00000022200.9	ENSMUST00000228301.2	912	4	-17	114	-17	5	multi-exon	FALSE	canonical	2	24	junction_3	175.150094363536	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTATGTTTGTTTGTT	4	True	NA	NA	False	AATAAA	-23	NA	12321518	12343402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12343358
ES.11591.3	chr15	+	2691	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	-16	-23	-16	23	multi-exon	FALSE	canonical	3	392	junction_2	32.4174164437712	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGCTCTCGTTCTC	5	True	NA	41	True	AATAAA	-45	NA	12321519	12351374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ES.11591.4	chr15	+	2404	2	FSM	ENSMUSG00000022200.9	ENSMUST00000226517.2	2359	2	-45	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAGCAAGCATGCCAT	-4	True	NA	18	True	AATAAA	-26	NA	12321536	12351351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12349453
ES.11591.5	chr15	+	2844	3	NIC	ENSMUSG00000022200.9	novel	2842	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	226	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTTATTTTATGAG	-4	True	NA	10	True	AATAAA	-12	NA	12321536	12351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12322043_12343122_12343238_12349453
ES.11591.6	chr15	+	2516	3	NIC	ENSMUSG00000022200.9	novel	2652	4	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	226	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATCAGAGCAAGCATGC	-4	True	NA	15	True	AATAAA	-23	NA	12321536	12351348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12322043_12343122_12343238_12349453
ES.11591.7	chr15	+	2688	5	FSM	ENSMUSG00000022200.9	ENSMUST00000228671.2	2842	5	-182	336	3	-10	multi-exon	FALSE	canonical	0	0	junction_4	191.953607676438	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGCCTGAATCAGAGCA	-2	True	NA	8	True	AATAAA	-16	NA	12321538	12351341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12343358_12343408_12349453
ES.11591.8	chr15	+	4152	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	3	-1503	3	1177	multi-exon	FALSE	canonical	3	392	junction_2	32.4174164437712	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGTCTGCAGGGGATG	-2	True	NA	NA	False	NA	NA	NA	12321538	12352854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ES.11591.9	chr15	+	3047	5	NNC	ENSMUSG00000022200.9	novel	2842	5	NA	NA	6	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.50870052042	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGAGTATGAGTGTT	9	False	NA	20	True	AATAAA	-22	NA	12321549	12351686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12322043_12330661_12330736_12339713_12339846_12343122_12343238_12349453
ES.11592.1	chr15	-	2516	1	Intergenic	novelGene_9659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACTAGAAAAAGACAGG	NA	False	NA	NA	False	ATTAAA	-41	NA	12329270	12326754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12326800_12329300
ES.11593.1	chr15	-	158	1	Intergenic	novelGene_9660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	12329712	12329554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12329600_12329700
ES.11594.1	chr15	-	173	1	Intergenic	novelGene_9661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	12337612	12337439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12337400_12337600
ES.11595.1	chr15	+	179	1	Antisense	novelGene_ENSMUSG00000022197.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACTACAGCTACT	NA	False	NA	NA	False	NA	NA	NA	12412351	12412530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_12412400_12412500
ES.11596.1	chr15	+	182	1	Intergenic	novelGene_9663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATCCCAAACCC	NA	False	NA	NA	False	NA	NA	NA	12508031	12508213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12508000_12508200
ES.11597.1	chr15	+	1279	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	-74	-203	-74	203	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCATAGAGAGTCAGAGAC	88	False	NA	NA	False	AATAAA	-37	NA	12574900	12576179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12574900_12576200
ES.11598.1	chr15	+	2313	1	Intergenic	novelGene_9666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	12726101	12728414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12726100_12728400
ES.11599.1	chr15	-	6350	1	Genic_Genomic	ENSMUSG00000022197.17	novel	NA	NA	NA	NA	50692	4372	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGCCTCTAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	12361774	12355424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_12355400_12361800
ES.11599.2	chr15	-	11282	24	NIC	ENSMUSG00000022197.17	novel	10756	24	NA	NA	-13	7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	1.31013210202777	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTGTGCGATGAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	12740023	12359789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12362326_12365713_12365849_12367895_12368167_12368704_12368807_12371674_12371793_12372532_12376467_12382684_12382830_12385246_12386035_12387622_12387780_12388629_12388665_12390053_12390136_12399264_12399398_12401521_12401640_12402380_12402610_12402723_12402798_12406552_12406668_12407345_12407466_12411093_12411240_12419543_12419659_12442565_12442699_12445608_12445752_12457883_12458386_12592166_12592997_12739702
ES.11599.3	chr15	-	155	1	Intergenic	novelGene_9662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTACCTTGTACATAA	NA	False	NA	NA	False	NA	NA	NA	12369136	12368981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12369000_12369100
ES.11599.4	chr15	-	178	1	Intergenic	novelGene_9664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATGCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12566739	12566561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12566600_12566700
ES.11599.5	chr15	-	2185	3	NNC	ENSMUSG00000022197.17	novel	10756	24	NA	NA	46	13971	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCCTGTCTAATT	NA	False	NA	NA	False	AATATA	-14	NA	12739964	12574629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12575723_12592166_12592997_12739702
ES.11599.6	chr15	-	3334	1	Intergenic	novelGene_9665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCACTCTGTAGCCCA	NA	False	NA	NA	False	NA	NA	NA	12700112	12696778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12696800_12700100
ES.116.1	chr1	-	4704	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-834	23081	intron_retention	FALSE	non_canonical	0	0	junction_1	147.165462895979	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTATTTATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	13198221	13160599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13160629_13183656_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.116.11	chr1	-	5176	6	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-834	-32	-834	32	intron_retention	FALSE	canonical	3	343	junction_5	37.7888872553824	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198221	13183648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842
ES.116.12	chr1	-	3470	7	NIC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-928	32	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	162.05391763923	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198315	13183648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13195389_13196081_13197333
ES.116.13	chr1	-	3010	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	656	30	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTCCTCTTTTCTT	NA	False	NA	-28	True	AATAAA	-40	NA	13196731	13183650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
ES.116.14	chr1	-	3992	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-859	29	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	145.804593863968	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198246	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196793
ES.116.15	chr1	-	2754	9	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-833	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.667648369573	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198220	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333_13197445_13198116
ES.116.16	chr1	-	1982	4	NIC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-75	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	187.06683297688	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13197462	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13184712_13186003_13186106_13195389_13196081_13197333
ES.116.17	chr1	-	2977	5	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1460	-29	1460	29	intron_retention	FALSE	canonical	3	384	junction_4	25.6904651573303	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13195927	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586
ES.116.18	chr1	-	5326	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-44	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.653466459765	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13197431	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13188440_13188631_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.19	chr1	-	3287	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-752	29	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	157.186357615437	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198139	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194687_13194842_13194897_13195389_13196081_13197333
ES.116.2	chr1	-	4932	3	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTATTTATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	13166142	13160599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13161527_13161724_13162988_13163400
ES.116.20	chr1	-	3012	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	46	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	147.165462895979	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13197341	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196868
ES.116.21	chr1	-	3527	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-962	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	163.318111535603	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198349	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194771_13195389_13196081_13197333
ES.116.22	chr1	-	3310	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-734	29	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_5	151.87575480622	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198121	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194728_13194842_13194897_13195389_13196081_13197333
ES.116.23	chr1	-	3120	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-765	29	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGTTCCTCTTTTCT	NA	False	NA	-29	True	AATAAA	-39	NA	13198152	13183651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197571
ES.116.25	chr1	-	3930	6	NIC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-101	27	intron_retention	FALSE	canonical	2	4	junction_4	162.653496734623	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGGTTCCTCTTTT	NA	False	NA	-31	True	AATAAA	-37	NA	13197488	13183653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13195389_13196081_13197333
ES.116.26	chr1	-	2606	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-833	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	195.608239431097	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAAGCTGGTTCCTCT	NA	False	NA	-34	True	AATAAA	-34	NA	13198220	13183656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194771_13195389_13196081_13198120
ES.116.27	chr1	-	4389	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	1879	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	156.269798745631	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAAAGCTGGTTCCTC	NA	False	NA	-35	True	AATAAA	-33	NA	13195508	13183657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13191618_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.116.29	chr1	-	3432	7	NIC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-752	18	intron_retention	FALSE	canonical	3	189	junction_6	89.7323179734531	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTTTTAAAGCTGGT	NA	False	NA	-40	True	AATAAA	-28	NA	13198139	13183662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194897_13195389_13196081_13197333
ES.116.3	chr1	-	559	3	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	13176145	13160628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13161041_13174549_13174641_13176089
ES.116.31	chr1	-	3202	9	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-752	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.667648369573	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATGCTACTCTGGTTT	NA	False	NA	-50	True	AATAAA	-18	NA	13198139	13183672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333_13197445_13197566
ES.116.32	chr1	-	3089	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-752	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	147.165462895979	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTATGCTACTCTGGT	NA	False	NA	-52	True	AATAAA	-16	NA	13198139	13183674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197566
ES.116.33	chr1	-	2611	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-834	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	143.424871893096	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACACTTATGCTAC	NA	False	NA	-58	True	AATAAA	-10	NA	13198221	13183680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13198120
ES.116.34	chr1	-	4552	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-752	0	intron_retention	FALSE	canonical	2	20	junction_5	151.545830984851	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACACTTATGCTAC	NA	False	NA	-58	True	AATAAA	-10	NA	13198139	13183680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194728_13194842_13194897_13195389
ES.116.35	chr1	-	2487	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.653466459765	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACACTTATGCTAC	NA	False	NA	-58	True	AATAAA	-10	NA	13197384	13183680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186032_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.36	chr1	-	2246	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	261	-597	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	145.804593863968	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGTCTGCCTTGAACA	NA	False	NA	-2	True	AATAAA	-39	NA	13197126	13184277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196793
ES.116.37	chr1	-	4044	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-833	606	-833	-606	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCTCTCCTGTCTG	NA	False	NA	-11	True	AATAAA	-30	NA	13198220	13184286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.116.38	chr1	-	2915	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-957	606	-957	-606	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCTCTCCTGTCTG	NA	False	NA	-11	True	AATAAA	-30	NA	13198344	13184286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.39	chr1	-	2436	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	583	-617	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAAAAGGTTCCCCC	NA	False	NA	-22	True	AATAAA	-19	NA	13196804	13184297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
ES.116.4	chr1	-	5155	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-48	2548	intron_retention	TRUE	non_canonical	0	0	junction_1	163.318111535603	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGATGGTACATAGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	13197435	13181132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13182679_13183274_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13196081_13197333
ES.116.40	chr1	-	2248	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-455	771	-455	-771	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGACTCTCATTCCTG	NA	False	NA	NA	False	CATAAA	-42	NA	13197842	13184451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.41	chr1	-	1832	7	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-75	-779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	163.318111535603	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGAACGCTGACTCT	NA	False	NA	NA	False	CATAAA	-34	NA	13197462	13184459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194771_13195389_13196081_13197333
ES.116.42	chr1	-	212	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTGATGTCCAGTGC	NA	False	NA	NA	False	NA	NA	NA	13185316	13185104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13185100_13185300
ES.116.43	chr1	-	3847	6	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	-833	-2689	intron_retention	FALSE	canonical	0	0	junction_1	160.967822871529	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTCAGTATGGCTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	13198220	13186369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13186700_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.116.44	chr1	-	3220	5	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-51	6963	-51	-6963	5prime_fragment	FALSE	canonical	3	189	junction_4	92.9257095749072	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	13197438	13190643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.45	chr1	-	4848	2	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	93	7035	93	-7035	intron_retention	FALSE	canonical	3	384	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTGCCAGGCCAGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	13197294	13190715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13192856_13194586
ES.116.46	chr1	-	2165	4	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-232	9930	-232	-9930	5prime_fragment	FALSE	canonical	3	189	junction_3	102.973567266341	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAGGAACTGGAGAAATG	NA	False	NA	NA	False	NA	NA	NA	13197619	13193610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.5	chr1	-	2883	8	NNC	ENSMUSG00000042414.8	novel	2564	8	NA	NA	1029	276	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	145.124436401374	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCGTAATTGGATGGCT	NA	False	NA	-5	True	AATAAA	-16	NA	13196358	13183404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13196261
ES.116.6	chr1	-	3700	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-860	-276	-860	276	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCGTAATTGGATGGCT	NA	False	NA	-5	True	AATAAA	-16	NA	13198247	13183404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.7	chr1	-	4804	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-713	-274	-713	274	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTCGTAATTGGATGG	NA	False	NA	-7	True	AATAAA	-14	NA	13198100	13183406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.116.8	chr1	-	3694	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-1098	-32	-1098	32	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198485	13183648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ES.116.9	chr1	-	4798	7	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	-949	-32	-949	32	intron_retention	FALSE	canonical	3	343	junction_5	37.0135110466435	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTCCTCTTTTCTTTC	NA	False	NA	-26	True	AATAAA	-42	NA	13198336	13183648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ES.1160.1	chr1	-	564	3	FSM	ENSMUSG00000097648.2	ENSMUST00000180837.2	1009	3	9	436	9	-436	multi-exon	FALSE	canonical	1	2	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGTACTCCTTCCTT	NA	False	NA	NA	False	AATATA	-7	NA	113891855	113819550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_113819779_113837064_113837094_113891548
ES.1160.2	chr1	-	5485	2	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTGTGTCTTTAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	113864731	113858606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_113859939_113860578
ES.1160.3	chr1	-	571	3	NNC	ENSMUSG00000097648.2	novel	1009	3	NA	NA	-33	-39494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACACTGTGTCTTTAG	NA	False	NA	NA	False	ATTAAA	-16	NA	113891897	113858608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_113858740_113868043_113868135_113891548
ES.1160.4	chr1	-	2252	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTAGAAGGAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	113867037	113864785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_113864800_113867000
ES.1160.5	chr1	-	127	2	Genic_Genomic	ENSMUSG00000097648.2	novel	1009	3	NA	NA	-36	-66661	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	113891900	113885775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_113885837_113891834
ES.11600.1	chr15	-	178	1	Intergenic	novelGene_9667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAAAAGTATCA	NA	False	NA	NA	False	NA	NA	NA	12758426	12758248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_12758200_12758400
ES.11601.1	chr15	+	177	1	Intergenic	novelGene_9668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCTGGATCAAGA	NA	False	NA	NA	False	NA	NA	NA	12791029	12791206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12791000_12791200
ES.11602.1	chr15	+	2958	1	Antisense	novelGene_ENSMUSG00000022195.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAAATATTAATGAGTG	NA	False	NA	NA	False	AAGAAA	-8	NA	12818707	12821665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_12818700_12821700
ES.11603.1	chr15	-	3768	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	-21	219	-21	-219	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGTGTTGCATGT	NA	False	NA	10	True	AATAAA	-33	NA	12824756	12808481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.10	chr15	-	8315	6	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	-21	232	intron_retention	FALSE	canonical	3	60	junction_5	110.404710044454	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	NA	False	NA	-8	True	AATAAA	-15	NA	12824756	12808499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12816058_12816405_12816469_12817943_12821640_12824552
ES.11603.11	chr15	-	4339	5	NNC	ENSMUSG00000022195.8	novel	836	5	NA	NA	-2037	232	intron_retention	TRUE	non_canonical	0	0	junction_1	141.40434045672	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	4646	False	NA	-8	True	AATAAA	-15	NA	12820023	12808499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12809984_12813753_12814344_12815935_12816058_12816405_12816469_12817943
ES.11603.12	chr15	-	3692	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	110.502757318539	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	NA	False	NA	-8	True	AATAAA	-15	NA	12824726	12808499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823765_12824552
ES.11603.13	chr15	-	3636	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	22	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.262116681116	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	-6	False	NA	-8	True	AATAAA	-15	NA	12824675	12808499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821625_12823664_12823793_12824552
ES.11603.14	chr15	-	3635	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	232	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	108.224015357036	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTAATTTTTTATTA	NA	False	NA	-8	True	AATAAA	-15	NA	12824726	12808499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823708_12824552
ES.11603.15	chr15	-	3562	9	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	231	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	102.879708276219	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824726	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12823646_12823793_12824552
ES.11603.16	chr15	-	6592	6	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	4	231	intron_retention	FALSE	canonical	3	13	junction_2	146.032051276424	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824693	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12821640_12824552
ES.11603.17	chr15	-	4042	10	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	154.835954608438	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824704	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12812709_12813140_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823708_12824552
ES.11603.18	chr15	-	3858	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	109.565904824448	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824704	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818532_12821489_12821640_12823646_12823793_12824552
ES.11603.19	chr15	-	3626	8	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	279	231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	169.783415454117	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	251	False	NA	-9	True	AATAAA	-14	NA	12824418	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816053_12816405_12816469_12817943_12818371_12823646_12823793_12824182
ES.11603.2	chr15	-	4781	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	3	-232	intron_retention	FALSE	canonical	3	264	junction_7	26.7574136207794	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTTTATTATTTTA	NA	False	NA	-3	True	AATAAA	-20	NA	12824694	12808494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.20	chr15	-	4228	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	50	231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	144.964435293626	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	-18	True	NA	-9	True	AATAAA	-14	NA	12824647	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816053_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823765_12823931
ES.11603.22	chr15	-	6647	7	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	16	231	intron_retention	FALSE	canonical	3	60	junction_6	103.56908590673	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824681	12808500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12821640_12824552
ES.11603.23	chr15	-	4236	8	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	142.712927206461	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824704	12808501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12823646_12823793_12823862
ES.11603.24	chr15	-	8224	6	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-8	230	intron_retention	FALSE	canonical	3	13	junction_2	121.522672781667	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824705	12808501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12821640_12823646_12823793_12824552
ES.11603.26	chr15	-	3629	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	230	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	109.959547292704	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824704	12808501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.27	chr15	-	3543	8	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-6	230	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	144.250207795274	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824703	12808501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823708_12824552
ES.11603.28	chr15	-	4385	9	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-6	230	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	97.504406951686	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTTAATTTTTTAT	NA	False	NA	-10	True	AATAAA	-13	NA	12824703	12808501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12823862
ES.11603.29	chr15	-	3332	8	NNC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	-7	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	117.659834840501	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTATTTGGAAGCTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	12824704	12808717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821638_12824552
ES.11603.3	chr15	-	3802	10	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	18	-234	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	134.25496289422	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824679	12808496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815022_12815149_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.31	chr15	-	3618	10	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	134.25496289422	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTAAATCCTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	12824726	12808727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815022_12815149_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.32	chr15	-	3184	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	-24	-4	-5	4	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTAAATCCTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	12824721	12808727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
ES.11603.33	chr15	-	5053	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	2	4	intron_retention	FALSE	canonical	3	264	junction_7	29.8923237706299	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTAAATCCTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	12824695	12808727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.35	chr15	-	3231	7	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	18	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	140.23512002665	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATTAAATCCTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	12824679	12808728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.36	chr15	-	3521	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	-21	466	-21	3	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATTAAATCCTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	12824756	12808728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.37	chr15	-	5992	7	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	14	-2	intron_retention	FALSE	canonical	1	9	junction_3	113.012413280823	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATGAAATTAAATCCT	NA	False	NA	NA	False	AATAAA	-12	NA	12824683	12808733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12812159_12814276_12816058_12816405_12816469_12818074_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.38	chr15	-	3382	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	5	579	-3	16	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTCTTCCAAACT	NA	False	NA	4	True	AATAAA	-35	NA	12824730	12808841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.39	chr15	-	4241	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	31	8	intron_retention	FALSE	canonical	3	21	junction_5	105.535176454999	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAAGATTTGTGTTCT	3	True	NA	-4	True	AATAAA	-27	NA	12824666	12808849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12823646_12823793_12824552
ES.11603.4	chr15	-	3410	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	-19	-235	0	-234	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824716	12808496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
ES.11603.40	chr15	-	3224	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	-10	-8	1	8	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAAGATTTGTGTTCT	NA	False	NA	-4	True	AATAAA	-27	NA	12824726	12808849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.41	chr15	-	3106	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	9	851	1	-256	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGTCTTCACAGCCC	NA	False	NA	2	True	AATAAA	-27	NA	12824726	12809113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.42	chr15	-	4690	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	-264	intron_retention	FALSE	canonical	3	264	junction_7	29.8923237706299	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGTAGCTTTTGTCTT	NA	False	NA	-6	True	AATAAA	-19	NA	12824726	12809121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.43	chr15	-	2788	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	-23	391	-4	-265	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGTAGCTTTTGTCT	NA	False	NA	-7	True	AATAAA	-18	NA	12824720	12809122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
ES.11603.44	chr15	-	4158	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-7	-270	intron_retention	FALSE	canonical	3	264	junction_7	26.7574136207794	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGAGCACAGTAGCTTT	NA	False	NA	-12	True	AATAAA	-13	NA	12824704	12809127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.45	chr15	-	5978	8	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	16	-270	intron_retention	FALSE	non_canonical	0	0	junction_1	155.833637090904	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGAGCACAGTAGCTTT	NA	False	NA	-12	True	AATAAA	-13	NA	12824681	12809127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12812159_12812743_12813000_12814276_12816053_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.46	chr15	-	6210	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	-271	intron_retention	FALSE	canonical	3	264	junction_7	30.6999966761947	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCGAGCACAGTAGCTT	NA	False	NA	-13	True	AATAAA	-12	NA	12824726	12809128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12821640_12823646_12823793_12824552
ES.11603.47	chr15	-	2944	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	-10	272	1	-272	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCGAGCACAGTAGCT	NA	False	NA	-14	True	AATAAA	-11	NA	12824726	12809129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.48	chr15	-	2613	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	36	557	17	-557	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCTGTCACTGCATAG	NA	False	NA	NA	False	NA	NA	NA	12824680	12809414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.49	chr15	-	2794	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	20	1152	1	-557	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCTGTCACTGCATAG	NA	False	NA	NA	False	NA	NA	NA	12824715	12809414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.5	chr15	-	3499	7	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	1	-234	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	140.23512002665	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824715	12808496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.50	chr15	-	2070	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	30	1866	-8	-1271	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTGTTGTTGTAGGT	NA	False	NA	NA	False	AATACA	-11	NA	12824705	12810128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.51	chr15	-	6337	7	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	0	-1726	intron_retention	FALSE	canonical	3	264	junction_6	31.9304800395415	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGTTATCTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	12824716	12810583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12816058_12816405_12816469_12817943_12821640_12823646_12823793_12824552
ES.11603.52	chr15	-	1582	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	52	2332	14	-1737	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGATGGAGACTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	12824683	12810594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.53	chr15	-	1140	6	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	-2627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.382259361341	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGGTGAGTTGCTCTG	NA	False	NA	NA	False	AATACA	-10	NA	12824726	12815872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12816053_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ES.11603.54	chr15	-	627	3	NNC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	1	-2506	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	123.5	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGTAAAATATTAAATTA	NA	False	NA	NA	False	NA	NA	NA	12824726	12822495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_12822803_12823646_12823793_12824552
ES.11603.6	chr15	-	6833	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-1	-234	intron_retention	FALSE	canonical	3	264	junction_7	30.6999966761947	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824717	12808496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12821640_12823646_12823793_12824552
ES.11603.7	chr15	-	3607	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	-40	-361	-21	-234	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTTTTTATTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	12824756	12808496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11603.8	chr15	-	6776	7	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	-1	234	intron_retention	FALSE	canonical	3	13	junction_2	116.134141788231	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAATTTTTTATTATT	NA	False	NA	-6	True	AATAAA	-17	NA	12824728	12808497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12821640_12823646_12823793_12824552
ES.11603.9	chr15	-	5137	7	NIC	ENSMUSG00000022195.8	novel	3206	8	NA	NA	1	233	intron_retention	FALSE	canonical	3	60	junction_6	102.702509976902	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTAATTTTTTATTAT	NA	False	NA	-7	True	AATAAA	-16	NA	12824696	12808498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_12810931_12812018_12812159_12814276_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ES.11604.1	chr15	+	4880	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-49	96	intron_retention	FALSE	canonical	2	2	junction_3	176.431414667662	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGTAGTTGCTTTCTG	-11	True	NA	12	True	AATAAA	-19	NA	12824851	12935473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833307_12833476_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.10	chr15	+	4569	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-20	-47	intron_retention	FALSE	canonical	1	3	junction_9	200.49383928649	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	33	False	NA	-18	True	AATAAA	-10	NA	12824928	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851301_12851404_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.100	chr15	+	5251	2	ISM	ENSMUSG00000022191.17	ENSMUST00000150211.8	3248	20	2913	58166	2913	11024	internal_fragment	FALSE	canonical	3	538	junction_1	0	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGAGGTCTGCTTTTT	6736	False	NA	NA	False	NA	NA	NA	12840348	12845731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12842254_12842385
ES.11604.101	chr15	+	2515	25	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	5128	-10217	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	183.334147725464	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGCACCATTTGTC	8951	False	NA	NA	False	AATAAA	-17	NA	12842563	12925159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12925051
ES.11604.103	chr15	+	1784	17	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	60123	46	6278	-45	3prime_fragment	FALSE	canonical	3	608	junction_3	80.9113857485459	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	NA	False	NA	-16	True	AATAAA	-12	NA	12885071	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.104	chr15	+	3294	9	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	85386	46	31541	-45	3prime_fragment	FALSE	canonical	3	681	junction_3	82.2685199514371	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	NA	False	NA	-16	True	AATAAA	-12	NA	12910334	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.105	chr15	+	185	1	Intergenic	novelGene_9669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	740	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTCTGCTTAATAGGC	NA	False	NA	NA	False	NA	NA	NA	12912197	12912382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_12912200_12912400
ES.11604.106	chr15	+	764	6	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	99150	48	45305	-47	3prime_fragment	FALSE	canonical	3	696	junction_1	82.7284715197857	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	0	True	NA	-18	True	AATAAA	-10	NA	12924098	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.107	chr15	+	1062	5	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	100691	2	46846	-1	3prime_fragment	FALSE	canonical	3	718	junction_1	74.1092942889082	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTTTGCTACAGAGT	1541	False	NA	28	True	ATTAAA	-18	NA	12925639	12935375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.11	chr15	+	4454	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-20	-45	intron_retention	FALSE	canonical	1	2	junction_6	173.774067313245	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	33	False	NA	-16	True	AATAAA	-12	NA	12824928	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842400_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.12	chr15	+	4482	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-19	-47	intron_retention	FALSE	canonical	0	0	junction_6	145.601868048589	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	34	False	NA	-18	True	AATAAA	-10	NA	12824929	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842246_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.16	chr15	+	3421	32	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-10	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.271934072581	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	43	False	NA	-15	True	AATAAA	-13	NA	12824938	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827369_12842400_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.18	chr15	+	3901	26	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-4	27441	-4	4039	5prime_fragment	FALSE	canonical	3	495	junction_3	77.8602440273597	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGGGTTGTTTTTTTGT	49	False	NA	NA	False	AATAAA	-29	NA	12824944	12907936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409
ES.11604.2	chr15	+	4714	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-97	-98	-49	98	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTAGTTGCTTTCTGCT	-11	True	NA	14	True	AATAAA	-21	NA	12824851	12935475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.21	chr15	+	4483	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-3	-47	intron_retention	FALSE	non_canonical	0	0	junction_9	182.228422856825	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	50	False	NA	-18	True	AATAAA	-10	NA	12824945	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851879_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890565_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.22	chr15	+	4611	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-3	-44	intron_retention	FALSE	canonical	3	44	junction_3	169.480343812418	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	50	False	NA	-15	True	AATAAA	-13	NA	12824945	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.23	chr15	+	4519	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-3	3	-3	-2	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGTCTTTGCTACAGAG	50	False	NA	27	True	ATTAAA	-17	NA	12824945	12935374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.24	chr15	+	2793	15	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-2	67126	-2	-17065	5prime_fragment	FALSE	canonical	3	495	junction_3	75.662010255599	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTAATTTAGTTTATG	51	False	NA	NA	False	ATTAAA	-16	NA	12824946	12868251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681
ES.11604.26	chr15	+	4719	37	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-2	-45	intron_retention	FALSE	canonical	0	0	junction_4	217.641700329285	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	51	False	NA	-16	True	AATAAA	-12	NA	12824946	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12832524_12832659_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.28	chr15	+	4516	33	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-1	-47	intron_retention	FALSE	canonical	0	0	junction_10	211.797568354638	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	52	False	NA	-18	True	AATAAA	-10	NA	12824947	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859467_12859546_12861779_12861826_12866614_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.29	chr15	+	4456	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-1	-45	intron_retention	FALSE	canonical	1	1	junction_1	146.1653593836	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	52	False	NA	-16	True	AATAAA	-12	NA	12824947	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826168_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.3	chr15	+	4532	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-32	-42	intron_retention	FALSE	canonical	3	79	junction_17	136.664317995404	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTGTTGTCTTAATGAT	6	True	NA	-13	True	AATAAA	-15	NA	12824868	12935334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.30	chr15	+	4520	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-1	-47	intron_retention	FALSE	canonical	1	1	junction_3	177.424186741313	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	52	False	NA	-18	True	AATAAA	-10	NA	12824947	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12831797_12831846_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.31	chr15	+	4073	33	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-1	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.659988898643	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGGTTGTTGTCTTAA	52	False	NA	-17	True	AATAAA	-11	NA	12824947	12935330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825008_12834128_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.32	chr15	+	4260	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	0	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	144.494142073046	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	53	False	NA	-15	True	AATAAA	-13	NA	12824948	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827365_12834114_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.33	chr15	+	3322	7	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	1	90952	1	9718	5prime_fragment	FALSE	canonical	3	495	junction_3	36.4756387500236	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTATTTTTATTGTA	54	False	NA	NA	False	AGTAAA	-37	NA	12824949	12844425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385
ES.11604.34	chr15	+	4390	34	NIC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	2	-45	intron_retention	FALSE	canonical	0	0	junction_9	148.52646293788	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	55	False	NA	-16	True	AATAAA	-12	NA	12824950	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.36	chr15	+	4532	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	3	-44	intron_retention	FALSE	canonical	0	0	junction_27	178.913272799067	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	56	False	NA	-15	True	AATAAA	-13	NA	12824951	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913393_12913455_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.39	chr15	+	4452	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	9	-45	intron_retention	FALSE	canonical	1	1	junction_6	145.472039192593	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	62	False	NA	-16	True	AATAAA	-12	NA	12824957	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842397_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.41	chr15	+	4610	20	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	10	1576	intron_retention	FALSE	canonical	3	44	junction_3	210.804303309085	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAAGAGCCCGTGTGT	63	False	NA	NA	False	ATTAAA	-19	NA	12824958	12886892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073
ES.11604.42	chr15	+	4607	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	10	-44	intron_retention	FALSE	non_canonical	0	0	junction_24	196.001366092699	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	63	False	NA	-15	True	AATAAA	-13	NA	12824958	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902661_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.43	chr15	+	4492	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	10	-44	intron_retention	TRUE	canonical	0	0	junction_14	220.561051266175	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	63	False	NA	-15	True	AATAAA	-13	NA	12824958	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.45	chr15	+	4437	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-13	-46	intron_retention	FALSE	non_canonical	0	0	junction_9	146.544609809982	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGGTTGTTGTCTTAA	67	False	NA	-17	True	AATAAA	-11	NA	12824962	12935330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848285_12851893_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.46	chr15	+	4432	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-13	-47	intron_retention	FALSE	non_canonical	0	0	junction_21	146.572634544214	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	67	False	NA	-18	True	AATAAA	-10	NA	12824962	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890231_12890569_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.47	chr15	+	4413	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-13	-45	intron_retention	FALSE	canonical	0	0	junction_27	146.06321805239	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	67	False	NA	-16	True	AATAAA	-12	NA	12824962	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12914030_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.48	chr15	+	4709	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-13	94	intron_retention	FALSE	canonical	3	44	junction_3	192.622735852617	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGGAGTAGTTGCTTTC	67	False	NA	10	True	AATAAA	-17	NA	12824962	12935471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.5	chr15	+	4462	24	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	-68	31480	-20	0	5prime_fragment	FALSE	canonical	3	495	junction_3	78.4572174605027	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATGTTGTGTTGTACA	18	True	NA	NA	False	AATATA	-18	NA	12824880	12903897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670
ES.11604.51	chr15	+	4411	25	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-77	intron_retention	FALSE	canonical	3	44	junction_3	202.371834440962	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCACTGGCTTGTT	69	False	NA	NA	False	TATAAA	-15	NA	12824964	12903820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670
ES.11604.53	chr15	+	3664	33	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-45	intron_retention	TRUE	non_canonical	0	0	junction_4	149.414400530663	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	69	False	NA	-16	True	AATAAA	-12	NA	12824964	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834294_12842519_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.56	chr15	+	4448	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-47	intron_retention	FALSE	non_canonical	0	0	junction_27	146.06321805239	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	69	False	NA	-18	True	AATAAA	-10	NA	12824964	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912635_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.57	chr15	+	7850	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-45	intron_retention	FALSE	canonical	0	0	junction_34	144.638246388495	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	69	False	NA	-16	True	AATAAA	-12	NA	12824964	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12932367_12934253
ES.11604.58	chr15	+	5079	33	NIC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-44	intron_retention	FALSE	canonical	3	495	junction_3	97.7154470580266	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	69	False	NA	-15	True	AATAAA	-13	NA	12824964	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.6	chr15	+	5984	33	NIC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	14	-43	intron_retention	FALSE	canonical	3	495	junction_3	97.245802447972	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTGTTGTCTTAATGA	19	False	NA	-14	True	AATAAA	-14	NA	12824914	12935333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12914143_12915424_12915531_12924141_12924284_12926076_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.62	chr15	+	4440	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-52	intron_retention	FALSE	canonical	0	0	junction_32	140.235281780497	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACACTGCGGTTGTTG	69	False	NA	16	True	AATAAA	-5	NA	12824964	12935324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928958_12929042_12929750_12929798_12935077
ES.11604.65	chr15	+	3250	32	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	151.76413870914	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGGTTGTTGTCTTAA	69	False	NA	-17	True	AATAAA	-11	NA	12824964	12935330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834090_12846264_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.66	chr15	+	4347	24	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-5	intron_retention	FALSE	canonical	0	0	junction_4	182.410606845115	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCATGTTGTGTT	69	False	NA	NA	False	AATATA	-13	NA	12824964	12903892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837370_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670
ES.11604.67	chr15	+	4464	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-47	intron_retention	FALSE	non_canonical	0	0	junction_3	180.921535689162	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	69	False	NA	-18	True	AATAAA	-10	NA	12824964	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827376_12833910_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861755_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.68	chr15	+	5833	34	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-41	intron_retention	FALSE	canonical	0	0	junction_26	148.147514155362	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTTGTCTTAATGATT	69	False	NA	-12	True	AATAAA	-16	NA	12824964	12935335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12914030_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.69	chr15	+	4452	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-11	-44	intron_retention	FALSE	non_canonical	0	0	junction_34	144.638246388495	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	69	False	NA	-15	True	AATAAA	-13	NA	12824964	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929792_12935077
ES.11604.7	chr15	+	4775	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	20	94	intron_retention	FALSE	canonical	3	44	junction_3	169.480343812418	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGGAGTAGTTGCTTTC	25	False	NA	10	True	AATAAA	-17	NA	12824920	12935471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.71	chr15	+	4462	35	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-8	-44	intron_retention	FALSE	canonical	0	0	junction_3	144.494142073046	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	72	False	NA	-15	True	AATAAA	-13	NA	12824967	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827386_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.72	chr15	+	4314	34	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	8	-52	intron_retention	FALSE	canonical	0	0	junction_26	181.903237680883	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACACTGCGGTTGTTG	88	False	NA	16	True	AATAAA	-5	NA	12824983	12935324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12912596_12912642_12914030_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.73	chr15	+	4241	33	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	8	-45	intron_retention	FALSE	non_canonical	0	0	junction_25	149.682812426603	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	88	False	NA	-16	True	AATAAA	-12	NA	12824983	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905716_12913993_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.74	chr15	+	4598	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	8	-44	intron_retention	FALSE	canonical	0	0	junction_1	179.300272601862	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	88	False	NA	-15	True	AATAAA	-13	NA	12824983	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12825309_12825469_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.77	chr15	+	7956	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	14	-44	intron_retention	FALSE	canonical	0	0	junction_5	221.474292053991	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	94	False	NA	-15	True	AATAAA	-13	NA	12824989	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834745_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12932367_12934253
ES.11604.78	chr15	+	4506	33	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	44	5958	17	-5957	5prime_fragment	FALSE	canonical	3	495	junction_3	85.8646680010905	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATCTCTGTCTTGCCCG	97	False	NA	NA	False	GATAAA	-11	NA	12824992	12929419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948
ES.11604.8	chr15	+	4602	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-21	-45	intron_retention	FALSE	canonical	0	0	junction_9	217.927574563436	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	32	False	NA	-16	True	AATAAA	-12	NA	12824927	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848140_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.80	chr15	+	4380	34	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	1149	-44	intron_retention	FALSE	canonical	1	9	junction_2	180.023980649289	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	2466	False	NA	-15	True	AATAAA	-13	NA	12827361	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12827379_12832524_12832659_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.81	chr15	+	4662	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8674	-96	-3813	96	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGTAGTTGCTTTCTG	10	False	NA	12	True	AATAAA	-19	NA	12833622	12935473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.82	chr15	+	4533	32	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-3805	0	intron_retention	FALSE	canonical	3	79	junction_14	137.871473424284	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTTGCTACAGAGTA	18	False	NA	29	True	ATTAAA	-19	NA	12833630	12935376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.84	chr15	+	4452	32	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-3791	-45	intron_retention	FALSE	canonical	0	0	junction_24	148.507083326443	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	32	False	NA	-16	True	AATAAA	-12	NA	12833644	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12914030_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.86	chr15	+	4510	32	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-3790	-47	intron_retention	FALSE	canonical	0	0	junction_14	148.778369132573	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	33	False	NA	-18	True	AATAAA	-10	NA	12833645	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881849_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.87	chr15	+	4249	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3790	-44	intron_retention	FALSE	canonical	1	3	junction_1	146.244708104046	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	33	False	NA	-15	True	AATAAA	-13	NA	12833645	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12833666_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.88	chr15	+	4473	32	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-3783	-47	intron_retention	FALSE	canonical	1	2	junction_3	147.308047200522	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCGGTTGTTGTCTTA	40	False	NA	-18	True	AATAAA	-10	NA	12833652	12935329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842400_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.89	chr15	+	4484	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8712	44	-3775	-43	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTGTTGTCTTAATGA	48	False	NA	-14	True	AATAAA	-14	NA	12833660	12935333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.90	chr15	+	4241	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3772	-44	intron_retention	FALSE	canonical	3	27	junction_1	174.13569769274	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGTTGTTGTCTTAATG	51	False	NA	-15	True	AATAAA	-13	NA	12833663	12935332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.92	chr15	+	4190	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3768	-45	intron_retention	FALSE	canonical	0	0	junction_25	205.41093530713	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	55	False	NA	-16	True	AATAAA	-12	NA	12833667	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12914030_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.93	chr15	+	4287	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3768	-18	intron_retention	FALSE	canonical	3	27	junction_1	142.947648716016	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCGTTTCTAGCTGGAT	55	False	NA	11	True	AATAAA	-39	NA	12833667	12935358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ES.11604.96	chr15	+	4277	32	NNC	ENSMUSG00000022191.17	novel	4570	35	NA	NA	-3522	-45	intron_retention	FALSE	non_canonical	0	0	junction_30	142.209610649499	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGGTTGTTGTCTTAAT	301	False	NA	-16	True	AATAAA	-12	NA	12833913	12935331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929090_12929750_12929798_12935077
ES.11604.99	chr15	+	7065	1	FSM	ENSMUSG00002075079.1	ENSMUST00020182889.1	140	1	-3537	-3388	-3537	3388	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5032	False	NA	NA	False	NA	NA	NA	12838644	12845709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_12838600_12845700
ES.11605.1	chr15	-	5647	1	Antisense	novelGene_ENSMUSG00000115807.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTCAAGTTGTCTTG	NA	False	NA	NA	False	TTTAAA	-5	NA	12962379	12956732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_12956700_12962400
ES.11606.1	chr15	+	175	1	Intergenic	novelGene_9670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACAAAGAGGAATC	NA	False	NA	NA	False	NA	NA	NA	13330465	13330640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_13330500_13330600
ES.11607.1	chr15	+	3458	1	Intergenic	novelGene_9671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGTATACTATTAAT	NA	False	NA	NA	False	NA	NA	NA	14169382	14172840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_14169400_14172800
ES.11608.1	chr15	+	1129	1	Intergenic	novelGene_9672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	14483808	14484937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_14483800_14484900
ES.11609.1	chr15	-	162	1	Intergenic	novelGene_9673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATAATTTCAACTAC	NA	False	NA	NA	False	NA	NA	NA	15625893	15625731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_15625700_15625900
ES.1161.1	chr1	+	3342	1	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	114534244	114537586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_114534200_114537600
ES.1161.2	chr1	+	2006	2	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	114535527	114537586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_114537341_114537393
ES.11610.1	chr15	-	4150	1	Intergenic	novelGene_9674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	15789060	15784910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_15784900_15789100
ES.11611.1	chr15	+	261	1	Intergenic	novelGene_9675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAAACCTTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	16198721	16198982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_16198700_16199000
ES.11612.1	chr15	-	1872	2	Intergenic	novelGene_9676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTTCAGGTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	16915218	16898122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_16899743_16914966
ES.11612.2	chr15	-	1294	2	Intergenic	novelGene_9677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGACTACAATTTATTA	1	False	NA	NA	False	AATAAA	-26	NA	16915122	16898604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_16899743_16914966
ES.11613.1	chr15	-	7491	6	NNC	ENSMUSG00000115182.2	novel	605	3	NA	NA	-17634	4684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAAATTGCCTATCT	NA	False	NA	NA	False	ATTAAA	-17	NA	17094659	17020740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_17022866_17024186_17024392_17025425_17025580_17058519_17058694_17089617_17089712_17089920
ES.11614.1	chr15	-	88	1	Intergenic	novelGene_9678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGACAGTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	19067994	19067906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_19067900_19068000
ES.11615.1	chr15	-	175	1	Intergenic	novelGene_9679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGAGAGCTAT	NA	False	NA	NA	False	NA	NA	NA	19526586	19526411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_19526400_19526600
ES.11616.1	chr15	-	172	2	Intergenic	novelGene_9680	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAACAATCTTAATA	NA	False	NA	NA	False	NA	NA	NA	20042274	20040180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20040191_20042112
ES.11616.2	chr15	-	177	2	Intergenic	novelGene_9681	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGGTTAAAAATG	NA	False	NA	NA	False	NA	NA	NA	20042276	20040780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20040788_20042106
ES.11616.4	chr15	-	201	1	Intergenic	novelGene_9682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACTCAGCAATCCCAGA	NA	False	NA	NA	False	NA	NA	NA	20042277	20042076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20042100_20042300
ES.11617.1	chr15	+	138	1	Intergenic	novelGene_9683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	20214901	20215039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_20214900_20215000
ES.11618.1	chr15	-	197	1	Intergenic	novelGene_9684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAATTAGACATAT	NA	False	NA	NA	False	AGTAAA	-6	NA	20252886	20252689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20252700_20252900
ES.11619.1	chr15	+	178	1	Intergenic	novelGene_9685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAACTAGATTCT	NA	False	NA	NA	False	NA	NA	NA	20257254	20257432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_20257300_20257400
ES.1162.1	chr1	-	6855	2	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTCAAACAG	NA	False	NA	NA	False	NA	NA	NA	114737128	114730067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_114736592_114736797
ES.1162.2	chr1	-	6856	2	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTTCAAACA	NA	False	NA	NA	False	NA	NA	NA	114737128	114730068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_114736618_114736821
ES.11620.1	chr15	-	4908	1	Intergenic	novelGene_9686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCAGTGGAAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	20323297	20318389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20318400_20323300
ES.11621.1	chr15	-	157	1	Intergenic	novelGene_9687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20848205	20848048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_20848000_20848200
ES.11622.1	chr15	-	178	1	Intergenic	novelGene_9688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACTACATAAATGA	NA	False	NA	NA	False	NA	NA	NA	22101322	22101144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_22101100_22101300
ES.11623.1	chr15	+	174	1	Intergenic	novelGene_9689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGTATCACTGTA	NA	False	NA	NA	False	NA	NA	NA	22612161	22612335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_22612200_22612300
ES.11624.10	chr15	-	5277	1	Intergenic	novelGene_9690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	9796	False	NA	NA	False	NA	NA	NA	22705094	22699817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_22699800_22705100
ES.11624.100	chr15	-	1025	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2781	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTAATTGGTCTTTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22703975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11624.11	chr15	-	5183	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	14	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	9795	False	NA	NA	False	NA	NA	NA	22705095	22699817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704565_22704659
ES.11624.14	chr15	-	5119	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9804	False	NA	NA	False	NA	NA	NA	22705086	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701522_22701575_22704594_22704688
ES.11624.15	chr15	-	4332	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	17	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9795	False	NA	NA	False	NA	NA	NA	22705095	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22704588_22704680
ES.11624.17	chr15	-	3848	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9796	False	NA	NA	False	NA	NA	NA	22705094	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700966_22702300_22704588_22704680
ES.11624.19	chr15	-	4739	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	23	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9798	False	NA	NA	False	NA	NA	NA	22705092	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701109_22704594_22704688
ES.11624.2	chr15	-	5356	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTCGTTGGTGATTTT	9627	False	NA	NA	False	NA	NA	NA	22705263	22699814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11624.22	chr15	-	4891	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700898_22701188_22704588_22704680
ES.11624.24	chr15	-	4801	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9798	False	NA	NA	False	NA	NA	NA	22705092	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22703556_22703935_22704588_22704680
ES.11624.25	chr15	-	3134	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	20.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22702717_22704588_22704680
ES.11624.26	chr15	-	5032	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704479_22704721
ES.11624.27	chr15	-	4383	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9798	False	NA	NA	False	NA	NA	NA	22705092	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701920_22702717_22704588_22704680
ES.11624.28	chr15	-	4744	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	23	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9795	False	NA	NA	False	NA	NA	NA	22705095	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701109_22704588_22704680
ES.11624.29	chr15	-	5228	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	9797	False	NA	NA	False	NA	NA	NA	22705093	22699818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704623_22704669
ES.11624.3	chr15	-	5239	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCGTTGGTGATTT	9742	False	NA	NA	False	NA	NA	NA	22705148	22699815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704574_22704667
ES.11624.32	chr15	-	5106	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	9797	False	NA	NA	False	NA	NA	NA	22705093	22699820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701253_22701326_22704588_22704680
ES.11624.33	chr15	-	5130	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	9798	False	NA	NA	False	NA	NA	NA	22705092	22699820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701525_22701573_22704588_22704680
ES.11624.34	chr15	-	5174	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	9797	False	NA	NA	False	NA	NA	NA	22705093	22699820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704596_22704694
ES.11624.37	chr15	-	4326	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	17	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9796	False	NA	NA	False	NA	NA	NA	22705094	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22704555_22704649
ES.11624.38	chr15	-	4828	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9960	False	NA	NA	False	NA	NA	NA	22704930	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704868
ES.11624.39	chr15	-	5133	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22703413_22703457_22704588_22704680
ES.11624.40	chr15	-	4313	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700656_22701521_22704588_22704680
ES.11624.41	chr15	-	5128	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22702301_22702350_22704588_22704680
ES.11624.42	chr15	-	3846	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22703377_22704802
ES.11624.43	chr15	-	5176	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704594_22704688
ES.11624.44	chr15	-	3528	4	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	14.6590889515307	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22701920_22702717_22704588_22704680
ES.11624.45	chr15	-	4326	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	17	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22704574_22704667
ES.11624.46	chr15	-	3854	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700966_22702289_22704588_22704680
ES.11624.50	chr15	-	2484	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	52	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700656_22701521_22702952_22704868
ES.11624.51	chr15	-	3650	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700801_22702325_22704588_22704680
ES.11624.52	chr15	-	3203	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	8.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22702640_22704588_22704680
ES.11624.53	chr15	-	4305	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9800	False	NA	NA	False	NA	NA	NA	22705090	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700656_22701521_22704582_22704675
ES.11624.54	chr15	-	1131	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9795	False	NA	NA	False	NA	NA	NA	22705095	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22703093_22703154_22704868
ES.11624.55	chr15	-	5114	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701927_22701986_22704588_22704680
ES.11624.57	chr15	-	5084	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	11.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9796	False	NA	NA	False	NA	NA	NA	22705094	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701277_22701368_22704588_22704680
ES.11624.58	chr15	-	5173	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9800	False	NA	NA	False	NA	NA	NA	22705090	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704605_22704696
ES.11624.59	chr15	-	4111	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701161_22702223_22704588_22704680
ES.11624.60	chr15	-	4467	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9842	False	NA	NA	False	NA	NA	NA	22704403	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700595_22700705
ES.11624.61	chr15	-	3555	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9795	False	NA	NA	False	NA	NA	NA	22705095	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22703154_22704868
ES.11624.63	chr15	-	3122	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	20.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9801	False	NA	NA	False	NA	NA	NA	22705089	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22702717_22704582_22704675
ES.11624.64	chr15	-	3509	4	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	3.29983164553722	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700656_22701521_22701920_22702717_22704574_22704667
ES.11624.66	chr15	-	3958	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9795	False	NA	NA	False	NA	NA	NA	22705095	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700015_22701231_22704588_22704682
ES.11624.67	chr15	-	2930	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	20.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9795	False	NA	NA	False	NA	NA	NA	22705095	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700111_22700402_22700670_22702717
ES.11624.7	chr15	-	5320	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	9660	False	NA	NA	False	NA	NA	NA	22705230	22699816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704556_22704649
ES.11624.71	chr15	-	5086	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704540_22704721
ES.11624.72	chr15	-	3125	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	20.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9798	False	NA	NA	False	NA	NA	NA	22705092	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22702717_22704556_22704649
ES.11624.74	chr15	-	1753	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	1732	False	NA	NA	False	NA	NA	NA	22703277	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701243_22702941
ES.11624.78	chr15	-	4491	4	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.6846079563875	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9796	False	NA	NA	False	NA	NA	NA	22705094	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701109_22701277_22701521_22704588_22704680
ES.11624.79	chr15	-	4644	4	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	18.7794213613377	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9796	False	NA	NA	False	NA	NA	NA	22705094	22699825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701109_22701277_22701368_22704596_22704688
ES.11624.80	chr15	-	5182	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACAAGACCGTTTTCTC	9797	False	NA	NA	False	NA	NA	NA	22705093	22699826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704565_22704649
ES.11624.81	chr15	-	1950	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	14.5	3284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACAAGACCGTTTTCTC	1263	False	NA	NA	False	NA	NA	NA	22703746	22699826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22700887_22700966_22702717
ES.11624.83	chr15	-	3163	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAACAAGACCGTTTTC	1961	False	NA	NA	False	NA	NA	NA	22703048	22699828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22701524_22701580
ES.11624.85	chr15	-	5047	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTCGGTTTCTTCCTT	9798	False	NA	NA	False	NA	NA	NA	22705092	22699952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11624.86	chr15	-	4673	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTAGATCTAAGATT	9795	False	NA	NA	False	NA	NA	NA	22705095	22700329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11624.87	chr15	-	4667	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTAGATCTAAGATT	9800	False	NA	NA	False	NA	NA	NA	22705090	22700329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704578_22704671
ES.11624.88	chr15	-	3816	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	17	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTAGATCTAAGATT	9798	False	NA	NA	False	NA	NA	NA	22705092	22700329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22704594_22704688
ES.11624.89	chr15	-	3750	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	17	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACTTTTAGTTTTAAG	9798	False	NA	NA	False	NA	NA	NA	22705092	22700397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701521_22704588_22704680
ES.11624.9	chr15	-	5176	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	9801	False	NA	NA	False	NA	NA	NA	22705089	22699816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704542_22704638
ES.11624.91	chr15	-	2552	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	20.5	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTTTTAGTTTTAA	9798	False	NA	NA	False	NA	NA	NA	22705092	22700398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22702717_22704587_22704680
ES.11624.92	chr15	-	4695	1	Intergenic	novelGene_9691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTTTTAGTTTTAA	9797	False	NA	NA	False	NA	NA	NA	22705093	22700398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_22700400_22705100
ES.11624.93	chr15	-	4600	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTTTTAGTTTTAA	9798	False	NA	NA	False	NA	NA	NA	22705092	22700398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704556_22704649
ES.11624.94	chr15	-	3713	4	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	18.7794213613377	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTTTTAGTTTTAA	9509	False	NA	NA	False	NA	NA	NA	22704736	22700398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700670_22701109_22701277_22701368_22704588_22704680
ES.11624.95	chr15	-	3733	3	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGACTTTTAGTTTT	9798	False	NA	NA	False	NA	NA	NA	22705092	22700400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22700656_22701521_22704588_22704680
ES.11624.96	chr15	-	4555	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGACAAGTCACCTTT	9800	False	NA	NA	False	NA	NA	NA	22705090	22700438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704598_22704694
ES.11624.97	chr15	-	2726	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAAGAAAAGACAG	9797	False	NA	NA	False	NA	NA	NA	22705093	22702320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704623_22704669
ES.11624.98	chr15	-	2665	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCACAGTGGTAGGAGA	9798	False	NA	NA	False	NA	NA	NA	22705092	22702334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11624.99	chr15	-	1390	2	Antisense	novelGene_ENSMUSG00000040420.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2901	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAGTTGACTTAAAA	9800	False	NA	NA	False	NA	NA	NA	22705090	22703607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_22704588_22704680
ES.11625.1	chr15	+	135	1	Intergenic	novelGene_9692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22783691	22783826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_22783700_22783800
ES.11626.1	chr15	-	155	1	Intergenic	novelGene_9693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAATAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23070518	23070363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_23070400_23070500
ES.11627.1	chr15	-	6674	1	Intergenic	novelGene_9694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	23247194	23240520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_23240500_23247200
ES.11628.1	chr15	+	2466	9	NNC	ENSMUSG00000040420.16	novel	1534	7	NA	NA	124089	314	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.695970545353753	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAGCCCAACAGTGAA	NA	False	NA	NA	False	AATAAA	-31	NA	23298038	23474818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_23298461_23366938_23367107_23382868_23383057_23400640_23400895_23410769_23410907_23436535_23436658_23446063_23446182_23460401_23460654_23474013
ES.11628.2	chr15	+	2508	1	NIC	ENSMUSG00000040420.16	novel	1534	7	NA	NA	208345	-15851	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGATGGATTATCTTG	NA	False	NA	NA	False	NA	NA	NA	23382294	23384802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_23382300_23384800
ES.11629.1	chr15	-	178	1	Intergenic	novelGene_9695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGATATTATATTA	NA	False	NA	NA	False	NA	NA	NA	23919896	23919718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_23919700_23919900
ES.1163.1	chr1	-	178	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGAAATGTAAT	2670	False	NA	NA	False	NA	NA	NA	116760332	116760154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_116760200_116760300
ES.11630.1	chr15	+	1249	1	Intergenic	novelGene_9696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGAGTATAGCTCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24305585	24306834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_24305600_24306800
ES.11631.1	chr15	+	143	1	Intergenic	novelGene_9697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGTCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	24310664	24310807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_24310700_24310800
ES.11632.1	chr15	+	5074	1	Intergenic	novelGene_9698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	24311673	24316747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_24311700_24316700
ES.11633.1	chr15	-	177	1	Intergenic	novelGene_9699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24424279	24424102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_24424100_24424300
ES.11634.1	chr15	-	6545	3	NNC	ENSMUSG00000097452.3	novel	1228	3	NA	NA	206	4612	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGGCTTTTCTGTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	25018274	24999605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_25004914_25004971_25006160_25018225
ES.11634.2	chr15	-	1903	3	NNC	ENSMUSG00000097452.3	novel	1228	3	NA	NA	184	-63	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACACAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	25018296	25004280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_25004914_25004971_25006160_25018214
ES.11634.3	chr15	-	1077	1	NIC	ENSMUSG00000097452.3	novel	1228	3	NA	NA	15	-12310	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	25018465	25017388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_25017400_25018500
ES.11635.1	chr15	+	177	1	Intergenic	novelGene_9700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACTTACAAGG	NA	False	NA	NA	False	NA	NA	NA	25268362	25268539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25268400_25268500
ES.11636.1	chr15	-	171	1	Intergenic	novelGene_9701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATATGCACCAT	NA	False	NA	NA	False	NA	NA	NA	25275930	25275759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25275800_25275900
ES.11637.1	chr15	-	194	1	Intergenic	novelGene_9702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATAGGAGTTCTCAT	NA	False	NA	0	True	NA	NA	NA	25305762	25305568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25305600_25305800
ES.11638.1	chr15	+	7082	1	Intergenic	novelGene_9703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGAGCATAAGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	25390116	25397198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25390100_25397200
ES.11638.2	chr15	+	1349	1	Intergenic	novelGene_9704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGCCTTGAGTCGAAAC	NA	False	NA	NA	False	NA	NA	NA	25394790	25396139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25394800_25396100
ES.11639.1	chr15	-	1898	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	-34	-9	-34	9	multi-exon	FALSE	canonical	3	95	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCTTGATTTTCCCCT	NA	False	NA	NA	False	AATAAA	-29	NA	25413884	25363353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_25365005_25413637
ES.11639.2	chr15	-	1556	3	NNC	ENSMUSG00000045763.9	novel	363	3	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGTAACTGGCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	25413821	25363370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_25364682_25364943_25365005_25413637
ES.11639.3	chr15	-	1331	3	NNC	ENSMUSG00000045763.9	novel	363	3	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGTAACTGGCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	25413863	25363370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_25364306_25364834_25365005_25413637
ES.11639.4	chr15	-	1303	3	NNC	ENSMUSG00000045763.9	novel	1855	2	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTAGTAACTGGCT	NA	False	NA	NA	False	AATAAA	-10	NA	25413850	25363372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_25364327_25364868_25365005_25413637
ES.11639.5	chr15	-	1663	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	8	184	8	-184	multi-exon	FALSE	canonical	3	95	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGCGTTCACTGCAG	NA	False	NA	NA	False	NA	NA	NA	25413842	25363546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_25365005_25413637
ES.11639.6	chr15	-	1026	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	29	800	29	780	multi-exon	FALSE	canonical	3	95	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25413821	25364162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_25365005_25413637
ES.1164.1	chr1	+	168	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116781441	116781609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_116781400_116781600
ES.11640.1	chr15	+	167	1	Intergenic	novelGene_9705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATACTAAGTC	NA	False	NA	NA	False	NA	NA	NA	25545403	25545570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25545400_25545600
ES.11641.1	chr15	-	162	1	Intergenic	novelGene_9706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	25571760	25571598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25571600_25571800
ES.11642.1	chr15	-	198	1	Intergenic	novelGene_9707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTCCG	NA	False	NA	NA	False	NA	NA	NA	25618765	25618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25618600_25618800
ES.11643.1	chr15	+	8127	40	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	332.867171080551	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	37	False	NA	18	True	AATAAA	-19	NA	25622610	25813761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.10	chr15	+	1456	2	NNC	ENSMUSG00000022272.18	novel	970	3	NA	NA	26	-64531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCCAATCTCCCAGAG	87	False	NA	NA	False	AATAAA	-17	NA	25622660	25637505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25636505
ES.11643.101	chr15	+	5973	23	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGCTGTGTTTGCTTT	28	False	NA	6	True	AATAAA	-7	NA	25774110	25813749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776118_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.102	chr15	+	3871	15	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	47	-11420	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	107.900204270579	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATATAAAAGACTGTGT	37	False	NA	NA	False	AATAAA	-9	NA	25774119	25802337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208
ES.11643.103	chr15	+	6089	23	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	174.737607300085	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	38	False	NA	12	True	AATAAA	-13	NA	25774120	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803581_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.104	chr15	+	5868	22	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	178.565879278854	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	38	False	NA	14	True	AATAAA	-15	NA	25774120	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.107	chr15	+	4651	23	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_22	171.247736306448	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	40	False	NA	14	True	AATAAA	-15	NA	25774122	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25813536
ES.11643.109	chr15	+	5973	23	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	93	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	172.821224448372	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTGTTTGCTTTCCTT	83	False	NA	10	True	AATAAA	-11	NA	25774165	25813753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801169_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.11	chr15	+	8977	39	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	36	0	intron_retention	FALSE	non_canonical	0	0	junction_6	331.536176230565	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	97	False	NA	14	True	AATAAA	-15	NA	25622670	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.110	chr15	+	2719	10	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	130	13850	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	234.706646426008	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTTCCTGCTTTTGAT	9	False	NA	NA	False	AATAAA	-21	NA	25774202	25795304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25794660
ES.11643.111	chr15	+	3890	21	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	130	-5751	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	99.6544529863067	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACGAGCGCCTCGAGA	9	False	NA	NA	False	NA	NA	NA	25774202	25808006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821
ES.11643.112	chr15	+	6795	22	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	148	-2	intron_retention	FALSE	canonical	3	400	junction_1	95.9322559540132	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	27	False	NA	12	True	AATAAA	-13	NA	25774220	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.113	chr15	+	5288	19	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	184	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	189.346088837411	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	9	False	NA	13	True	AATAAA	-14	NA	25774256	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776173_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.114	chr15	+	5713	22	ISM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	153494	0	2032	0	3prime_fragment	FALSE	canonical	3	571	junction_5	70.8932639626886	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	1857	False	NA	16	True	AATAAA	-17	NA	25776104	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.115	chr15	+	5586	21	ISM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	153791	2	2329	0	3prime_fragment	FALSE	canonical	3	571	junction_4	72.6435819601429	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	11	False	NA	14	True	AATAAA	-15	NA	25776401	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.116	chr15	+	5394	20	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-2111	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.215792539052	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	35	False	NA	14	True	AATAAA	-15	NA	25778164	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785965_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.117	chr15	+	5180	18	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-2111	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	184.899898102565	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	35	False	NA	13	True	AATAAA	-14	NA	25778164	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800314_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.118	chr15	+	6292	20	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-181	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	270.92101045474	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	78	False	NA	14	True	AATAAA	-15	NA	25780094	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25780175_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605_25809541_25810444_25810637_25812206
ES.11643.119	chr15	+	5218	19	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-181	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	174.888897712833	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	78	False	NA	18	True	AATAAA	-19	NA	25780094	25813761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25780175_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.120	chr15	+	5477	18	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27111	0	-169	0	3prime_fragment	FALSE	canonical	3	571	junction_1	64.2179463754347	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	90	False	NA	14	True	AATAAA	-15	NA	25780106	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.121	chr15	+	7452	18	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	184.022207927143	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	97	False	NA	14	True	AATAAA	-15	NA	25780113	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605_25810637_25812206
ES.11643.122	chr15	+	6458	19	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-75	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	237.451626002767	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTTTGCTTTCCTTG	184	False	NA	11	True	AATAAA	-12	NA	25780200	25813754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605_25809541_25810444_25810637_25812206
ES.11643.123	chr15	+	1934	2	FSM	ENSMUSG00000022272.18	ENSMUST00000145587.2	618	2	-23	-1293	-23	1293	multi-exon	FALSE	canonical	3	571	junction_1	0	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTAGCGTGGAGTCTCT	236	False	NA	NA	False	ATTAAA	-19	NA	25780252	25782747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25780499_25781059
ES.11643.124	chr15	+	4387	18	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27452	749	172	-749	3prime_fragment	FALSE	canonical	3	571	junction_1	64.2179463754347	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGCAATGTTGTAAAC	431	False	NA	NA	False	ATTAAA	-15	NA	25780447	25813008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.125	chr15	+	5312	17	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	27850	-13	570	11	3prime_fragment	FALSE	canonical	3	658	junction_13	51.5299897511148	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGTAGTTTTAAATAAC	829	False	NA	27	True	AATAAA	-28	NA	25780845	25813770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.126	chr15	+	4362	16	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	791	-4268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	192.931928122042	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGAGATACTTTAATTGC	1050	False	NA	NA	False	TATAAA	-16	NA	25781066	25809489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605
ES.11643.127	chr15	+	4806	18	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	845	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.675192121891	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	1104	False	NA	12	True	AATAAA	-13	NA	25781120	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25781194_25781409_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.128	chr15	+	4244	16	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	1386	3	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	190.851379059437	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTCCTTGAGTAGTTT	1645	False	NA	19	True	AATAAA	-20	NA	25781661	25813762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25781951_25783003_25783128_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.129	chr15	+	4316	15	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	32646	1	5366	-1	3prime_fragment	FALSE	canonical	3	658	junction_11	47.0225738234265	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	5625	False	NA	13	True	AATAAA	-14	NA	25785641	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.13	chr15	+	2634	18	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	54	20553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.6864493953094	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACGTTGTTGTTGT	115	False	NA	NA	False	TTTAAA	-19	NA	25622688	25744640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261
ES.11643.131	chr15	+	5255	12	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	13457	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	289.79474069682	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25793732	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25809295_25809359_25810444_25810637_25812206
ES.11643.132	chr15	+	3733	13	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	42770	0	15490	0	3prime_fragment	FALSE	canonical	3	658	junction_9	48.7251361094958	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25795765	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.133	chr15	+	3582	11	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	46499	0	19219	0	3prime_fragment	FALSE	canonical	3	658	junction_7	53.3674994729939	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25799494	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.134	chr15	+	3441	10	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	19842	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	238.872350848733	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25800117	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810632_25812206
ES.11643.136	chr15	+	3385	3	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	27759	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	359.5	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	NA	False	NA	12	True	AATAAA	-13	NA	25808034	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25808275_25810444_25810515_25810680
ES.11643.15	chr15	+	7597	38	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	123	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	333.262006003875	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	7	False	NA	14	True	AATAAA	-15	NA	25622757	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795854_25800297_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.16	chr15	+	7616	40	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	450	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	334.554152959319	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	316	False	NA	14	True	AATAAA	-15	NA	25623084	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726529_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805796_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.17	chr15	+	4060	1	FSM	ENSMUSG00000089639.2	ENSMUST00000161524.2	328	1	-3177	-555	-3177	555	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25678706	25682766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25678700_25682800
ES.11643.18	chr15	+	179	1	Intergenic	novelGene_9708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGTCACTAAACCC	NA	False	NA	NA	False	NA	NA	NA	25695133	25695312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25695100_25695300
ES.11643.19	chr15	+	7507	38	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-12313	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	333.988964182596	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25701643	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776231_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.20	chr15	+	5441	36	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-12243	-5751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	331.431852200511	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACGAGCGCCTCGAGA	NA	False	NA	NA	False	NA	NA	NA	25701713	25808006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821
ES.11643.21	chr15	+	237	1	Intergenic	novelGene_9709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGCGTGCATCAGATAT	2062	False	NA	NA	False	NA	NA	NA	25710327	25710564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25710300_25710600
ES.11643.22	chr15	+	166	1	Intergenic	novelGene_9710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAATCTTTTAGACCCT	5112	False	NA	NA	False	NA	NA	NA	25718989	25719155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25719000_25719200
ES.11643.24	chr15	+	7223	35	ISM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	102236	1	10890	1	3prime_fragment	FALSE	canonical	3	45	junction_1	321.288411057082	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTTCCTTGAGTA	30	False	NA	15	True	AATAAA	-16	NA	25724846	25813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.25	chr15	+	7189	35	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	10913	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	324.252658172882	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	53	False	NA	14	True	AATAAA	-15	NA	25724869	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739382_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.26	chr15	+	7224	36	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	10946	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	328.541171277649	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	86	False	NA	12	True	AATAAA	-13	NA	25724902	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25732799_25732860_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.27	chr15	+	7119	35	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	10981	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	335.856603782773	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	121	False	NA	14	True	AATAAA	-15	NA	25724937	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780451_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805801_25806628_25806766_25807142_25807264_25807821_25808269_25810444_25810637_25812206
ES.11643.28	chr15	+	6927	34	NNC	ENSMUSG00000022272.18	novel	727	6	NA	NA	12358	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332.071819485789	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTTCCTTGAGTA	1498	False	NA	15	True	AATAAA	-16	NA	25726314	25813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25726424_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742537_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779901_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.29	chr15	+	6759	31	NIC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-10397	0	intron_retention	FALSE	canonical	3	52	junction_3	301.720687612456	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	5469	False	NA	14	True	AATAAA	-15	NA	25732097	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25732186_25734073_25734193_25736031_25736179_25736486_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.3	chr15	+	8194	40	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	333.840617938268	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	43	False	NA	12	True	AATAAA	-13	NA	25622616	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666432_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.30	chr15	+	6456	30	ISM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	113418	8	-6466	-6	3prime_fragment	FALSE	canonical	3	52	junction_1	295.022158018275	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCTGTGTTTGCTTTCC	9400	False	NA	8	True	AATAAA	-9	NA	25736028	25813751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.31	chr15	+	6309	29	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-6010	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	289.244024773801	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	9856	False	NA	13	True	AATAAA	-14	NA	25736484	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25736584_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.32	chr15	+	6427	28	NNC	ENSMUSG00000022272.18	novel	727	6	NA	NA	-5520	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.85818531495	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	25736974	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25737258_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.33	chr15	+	5790	23	ISM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	121649	4	1765	-2	3prime_fragment	FALSE	canonical	3	82	junction_1	149.131708663603	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	1941	False	NA	12	True	AATAAA	-13	NA	25744259	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.34	chr15	+	5746	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-4967	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	5710	False	NA	13	True	AATAAA	-14	NA	25748028	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25748067_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.35	chr15	+	5900	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-1470	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	161.056846645027	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	1559	False	NA	14	True	AATAAA	-15	NA	25751525	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25751717_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.36	chr15	+	7447	22	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-1443	2	intron_retention	FALSE	canonical	3	18	junction_1	164.307093156924	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	1586	False	NA	18	True	AATAAA	-19	NA	25751552	25813761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25751717_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444
ES.11643.37	chr15	+	7215	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	-1091	2	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	111	False	NA	18	True	AATAAA	-19	NA	25751904	25813761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.38	chr15	+	5844	23	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	206.942619906785	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	37	False	NA	14	True	AATAAA	-15	NA	25753272	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25753407_25776106_25776233_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.4	chr15	+	8100	40	NIC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	332.867171080551	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTTCCTTGAGTA	47	False	NA	15	True	AATAAA	-16	NA	25622620	25813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.41	chr15	+	5718	24	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	227	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	202.769016622558	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTTCCTTGAGTA	56	False	NA	15	True	AATAAA	-16	NA	25753291	25813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800191_25800297_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.45	chr15	+	5813	23	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	229	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	206.473398922985	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	58	False	NA	14	True	AATAAA	-15	NA	25753293	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780490_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.46	chr15	+	6199	22	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	229	0	intron_retention	FALSE	canonical	3	78	junction_1	153.259683583925	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	58	False	NA	14	True	AATAAA	-15	NA	25753293	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.47	chr15	+	7991	22	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	229	-1	intron_retention	FALSE	canonical	3	78	junction_1	153.230799790823	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	58	False	NA	13	True	AATAAA	-14	NA	25753293	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25810637_25812206
ES.11643.48	chr15	+	3807	21	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	231	-5751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	215.846351602245	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACGAGCGCCTCGAGA	60	False	NA	NA	False	NA	NA	NA	25753295	25808006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780451_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821
ES.11643.49	chr15	+	5895	23	NNC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	266	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	207.324515061424	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	95	False	NA	16	True	AATAAA	-17	NA	25753330	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803581_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.5	chr15	+	8013	39	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.114283591681	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	49	False	NA	14	True	AATAAA	-15	NA	25622622	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776233_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.51	chr15	+	6902	24	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1810	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	248.935176536387	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	-10	True	NA	14	True	AATAAA	-15	NA	25754874	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605_25809359_25810444_25810637_25812206
ES.11643.52	chr15	+	6000	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1818	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	161.809454565476	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	-2	True	NA	16	True	AATAAA	-17	NA	25754882	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.53	chr15	+	6923	24	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1973	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	248.068340788024	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	153	False	NA	16	True	AATAAA	-17	NA	25755037	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808418_25808605_25809541_25810444_25810637_25812206
ES.11643.54	chr15	+	5085	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1990	-741	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	161.809454565476	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGTAAACAGTCTGTA	170	False	NA	NA	False	ATTAAA	-23	NA	25755054	25813016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.55	chr15	+	5750	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2759	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	163.694389964302	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	846	False	NA	14	True	AATAAA	-15	NA	25756091	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756133_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.57	chr15	+	6041	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2730	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	160.492913259781	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	875	False	NA	16	True	AATAAA	-17	NA	25756120	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756451_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.58	chr15	+	6079	24	NNC	ENSMUSG00000022272.18	novel	748	4	NA	NA	-2710	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.96649795631	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	895	False	NA	14	True	AATAAA	-15	NA	25756140	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756451_25759177_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.60	chr15	+	6274	25	NNC	ENSMUSG00000022272.18	novel	748	4	NA	NA	-2464	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.573187369929	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	1141	False	NA	12	True	AATAAA	-13	NA	25756386	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756451_25758827_25759238_25759653_25759748_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806770_25807147_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.62	chr15	+	5889	24	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2428	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	248.193442453919	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTTCCTTGAGTAGT	1177	False	NA	17	True	AATAAA	-18	NA	25756422	25813760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756451_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25809006_25809156_25810444_25810637_25812206
ES.11643.63	chr15	+	5789	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2268	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	1337	False	NA	12	True	AATAAA	-13	NA	25756582	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25756665_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.64	chr15	+	8147	23	NIC	ENSMUSG00000022272.18	novel	748	4	NA	NA	-2048	1	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	157.493040643832	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTTCCTTGAGTAGT	1557	False	NA	17	True	AATAAA	-18	NA	25756802	25813760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.65	chr15	+	5852	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-1959	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	1646	False	NA	14	True	AATAAA	-15	NA	25756891	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25757035_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.66	chr15	+	6294	24	NNC	ENSMUSG00000022272.18	novel	748	4	NA	NA	-103	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	212.69648760901	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCTTTCCTTGAGTA	3502	False	NA	15	True	AATAAA	-16	NA	25758747	25813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25759238_25759653_25759748_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.67	chr15	+	7010	22	NIC	ENSMUSG00000022272.18	novel	748	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_1	159.587066349475	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	64	False	NA	14	True	AATAAA	-15	NA	25758850	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.68	chr15	+	6088	23	NNC	ENSMUSG00000022272.18	novel	748	4	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	212.439592775246	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	73	False	NA	13	True	AATAAA	-14	NA	25758859	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780447_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.70	chr15	+	5903	24	NNC	ENSMUSG00000022272.18	novel	748	4	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	246.52071159973	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	320	False	NA	14	True	AATAAA	-15	NA	25759106	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25809295_25809359_25810444_25810637_25812206
ES.11643.72	chr15	+	5837	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	3039	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	3123	False	NA	12	True	AATAAA	-13	NA	25761909	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25762040_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.73	chr15	+	5914	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	4582	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	163.694389964302	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	4666	False	NA	14	True	AATAAA	-15	NA	25763452	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25763658_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.74	chr15	+	5826	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-3820	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.449702175025	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	6035	False	NA	14	True	AATAAA	-15	NA	25764821	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25764939_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.75	chr15	+	5991	23	NIC	ENSMUSG00000022272.18	novel	376	3	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	163.317017934774	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	9796	False	NA	14	True	AATAAA	-15	NA	25768582	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25768865_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.76	chr15	+	2527	8	NNC	ENSMUSG00000022272.18	novel	376	3	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	288.325071644447	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	9923	False	NA	14	True	AATAAA	-15	NA	25768709	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25768865_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781655_25812604
ES.11643.77	chr15	+	6049	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCCTTGAGTAGTT	45	False	NA	18	True	AATAAA	-19	NA	25774058	25813761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.80	chr15	+	5260	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	23	-748	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAATGTTGTAAACA	13	False	NA	NA	False	ATTAAA	-16	NA	25774095	25813009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.81	chr15	+	4749	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	23	-1259	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGCACAATCTCTT	13	False	NA	NA	False	NA	NA	NA	25774095	25812498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.82	chr15	+	5886	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	25	-120	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGCCAAACGAGTCTGC	15	False	NA	NA	False	TATAAA	-1	NA	25774097	25813637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.84	chr15	+	2692	9	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	26	5191	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	126.273450792318	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGGGGGGCTTGCTAA	16	False	NA	NA	False	NA	NA	NA	25774098	25786645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888
ES.11643.86	chr15	+	6916	22	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	26	-1	intron_retention	FALSE	canonical	3	400	junction_1	97.383618545409	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGCTTTCCTTGAG	16	False	NA	13	True	AATAAA	-14	NA	25774098	25813756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.89	chr15	+	5567	24	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.910516168146	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	16	False	NA	14	True	AATAAA	-15	NA	25774098	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781266_25781703_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.9	chr15	+	7936	39	NNC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	333.700652301221	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTCCTTGAGT	65	False	NA	14	True	AATAAA	-15	NA	25622638	25813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25623117_25666511_25666611_25714114_25714303_25722255_25722391_25723969_25724095_25725267_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.91	chr15	+	5520	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	27	-484	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGAAGTCATTTTGGAG	17	False	NA	NA	False	TATAAA	-37	NA	25774099	25813273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.93	chr15	+	5376	24	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.910516168146	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGCTTTCCTTGA	17	False	NA	12	True	AATAAA	-13	NA	25774099	25813755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781203_25781828_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.94	chr15	+	2555	12	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	27	14847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	218.240257325168	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCGTACAGAAAAATCAAAT	17	False	NA	NA	False	NA	NA	NA	25774099	25796301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25796114
ES.11643.95	chr15	+	6039	23	NNC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	173.011208016052	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	17	False	NA	16	True	AATAAA	-17	NA	25774099	25813759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779635_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ES.11643.96	chr15	+	5474	21	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	28	-4269	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	99.6544529863067	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCGAGATACTTTAATTG	18	False	NA	NA	False	TATAAA	-15	NA	25774100	25809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821
ES.11643.97	chr15	+	2344	7	FSM	ENSMUSG00000022272.18	ENSMUST00000125667.3	1030	7	28	-1342	28	1031	multi-exon	FALSE	canonical	3	400	junction_1	101.286173236473	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGACCAATATTTTTG	18	False	NA	NA	False	ATTAAA	-19	NA	25774100	25782485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059
ES.11644.1	chr15	-	2916	1	Antisense	novelGene_ENSMUSG00000022272.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGACTGAGAATGTTGGG	NA	False	NA	NA	False	NA	NA	NA	25675773	25672857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_25672900_25675800
ES.11645.1	chr15	-	5251	1	Antisense	novelGene_ENSMUSG00000022272.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAAAACCCAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	25723827	25718576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_25718600_25723800
ES.11646.1	chr15	-	2032	1	Intergenic	novelGene_9711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25728745	25726713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25726700_25728700
ES.11647.1	chr15	-	178	1	Intergenic	novelGene_9712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	25741535	25741357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25741400_25741500
ES.11648.1	chr15	-	1998	1	Antisense	novelGene_ENSMUSG00000022272.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAAGAGTTTTGCTT	150	False	NA	NA	False	AATAAA	-20	NA	25769777	25767779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_25767800_25769800
ES.11649.1	chr15	-	159	1	Intergenic	novelGene_9713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	25771419	25771260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25771300_25771400
ES.1165.1	chr1	-	275	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAATTGTCTCATTTGA	NA	False	NA	NA	False	NA	NA	NA	117416394	117416119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_117416100_117416400
ES.11650.1	chr15	+	3281	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	-33	0	-33	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	16	True	NA	21	True	TATAAA	-17	NA	25843232	25973773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ES.11650.2	chr15	+	2993	10	NNC	ENSMUSG00000022270.17	novel	3248	9	NA	NA	333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2577680797972	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	72	False	NA	21	True	TATAAA	-17	NA	25843598	25973773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25843699_25867042_25867121_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ES.11650.3	chr15	+	1552	1	Intergenic	novelGene_9715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGCAAAAAAAAAAAATGAA	NA	False	NA	NA	False	AAGAAA	-39	NA	25885934	25887486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_25885900_25887500
ES.11650.4	chr15	+	2935	7	NNC	ENSMUSG00000022270.17	novel	3248	9	NA	NA	8118	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.4186240067981	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTACCAGTATTCCTTT	8121	False	NA	8	True	TATAAA	-4	NA	25918627	25973760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25918899_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ES.11650.5	chr15	+	3393	7	NNC	ENSMUSG00000022270.17	novel	579	6	NA	NA	-464	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.4186240067981	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTACCAGTATTCCTTT	NA	False	NA	8	True	TATAAA	-4	NA	25933173	25973760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_25933903_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ES.11650.6	chr15	+	2797	7	NIC	ENSMUSG00000022270.17	novel	579	6	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.719919153924	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTATGTGTATGC	28	False	NA	20	True	TATAAA	-16	NA	25933591	25973772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25933713_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ES.11650.7	chr15	+	3711	3	ISM	ENSMUSG00000022270.17	ENSMUST00000228306.2	1430	7	24459	1	24459	-1	intron_retention	FALSE	canonical	3	25	junction_1	3.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAGAAAAAAAAAAAAAC	NA	False	NA	NA	False	GGGGCT	-12	NA	25967223	25972422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_25968631_25969881_25969947_25970183
ES.11651.1	chr15	-	2487	1	Intergenic	novelGene_9714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAACTCAGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	25847606	25845119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_25845100_25847600
ES.11652.1	chr15	+	1792	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	-37	1047	-37	7	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAGCAGTGTTTAAAG	-10	True	NA	22	True	AATAAA	-29	NA	25984414	25997520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ES.11652.2	chr15	+	6290	5	NIC	ENSMUSG00000052253.7	novel	2802	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	450	junction_2	25.4595267041632	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTATTTGAGCAGTG	25	True	NA	15	True	AATAAA	-22	NA	25984449	25997513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25996336_25997252
ES.11652.4	chr15	+	2730	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	71	1	71	-1	multi-exon	FALSE	canonical	3	450	junction_2	26.9962960422351	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATCTCTTCTAGGTTTC	37	False	NA	NA	False	ATTAAA	-18	NA	25984522	25998566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ES.11652.6	chr15	+	1479	5	NIC	ENSMUSG00000052253.7	novel	2802	6	NA	NA	106	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	223.485318309727	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTATTTGAGCAGTG	72	False	NA	15	True	AATAAA	-22	NA	25984557	25997513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_25985270_25986883_25987133_25991538_25991652_25996191_25996336_25997252
ES.11653.1	chr15	-	5424	1	Antisense	novelGene_ENSMUSG00000052253.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTCAAAGGAGAATTCTAT	NA	False	NA	NA	False	AATACA	-25	NA	25994791	25989367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_25989400_25994800
ES.11654.1	chr15	-	3854	2	ISM	ENSMUSG00000043556.11	ENSMUST00000059204.11	4632	4	342645	3	342583	-3	3prime_fragment	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGACTCAGTTCCATT	NA	False	NA	NA	False	AATAAA	-13	NA	26553021	26540547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_26543907_26552526
ES.11655.1	chr15	+	2463	1	Intergenic	novelGene_9716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-41	NA	26759196	26761659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_26759200_26761700
ES.11656.1	chr15	+	176	1	Intergenic	novelGene_9717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27184095	27184271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_27184100_27184300
ES.11657.1	chr15	-	4918	3	Intergenic	novelGene_9718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACGTTTATCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	27304407	27256293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_27260906_27285539_27285632_27304193
ES.11658.1	chr15	-	1740	3	NIC	ENSMUSG00000115138.2	novel	1237	5	NA	NA	515	2	intron_retention	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGACTTGGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	27463020	27459918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_27461420_27461806_27461958_27462932
ES.11659.1	chr15	+	3597	13	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-235	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8048503073604	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	NA	False	NA	23	True	ATTAAA	-19	NA	27466527	27594995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27466694_27466829_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.10	chr15	+	1984	1	Intergenic	novelGene_9719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAATTCTTCTGTTCAC	5192	False	NA	NA	False	AATAAA	-29	NA	27472041	27474025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_27472000_27474000
ES.11659.11	chr15	+	2832	12	Fusion	ENSMUSG00000115568.2_ENSMUSG00000022265.8	novel	1911	5	NA	NA	336	2	multi-exon	FALSE	canonical	0	0	junction_1	27.4801205381888	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGATTGCCTTCATGC	NA	False	NA	NA	False	AATAAA	-16	NA	27479427	27594540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_27479640_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.12	chr15	+	5883	2	Intergenic	novelGene_9720	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTCTCTCACTGGTC	NA	False	NA	NA	False	NA	NA	NA	27512754	27518870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_27513019_27513251
ES.11659.13	chr15	+	2622	11	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	77570	457	-27200	0	3prime_fragment	FALSE	canonical	3	75	junction_2	9.96042167782067	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTGATTGCCTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	27544332	27594538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.14	chr15	+	175	1	Intergenic	novelGene_9721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	27565354	27565529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_27565400_27565500
ES.11659.15	chr15	+	2314	5	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	8815	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4676347351721	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGCTATTTTCA	8741	False	NA	19	True	ATTAAA	-15	NA	27580347	27594991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27580506_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.2	chr15	+	3476	13	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8048503073604	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	NA	False	NA	23	True	ATTAAA	-19	NA	27466540	27594995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27466585_27466828_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.3	chr15	+	3519	13	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-152	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8048503073604	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGCTATTTTCA	8	False	NA	19	True	ATTAAA	-15	NA	27466610	27594991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27466694_27466820_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.4	chr15	+	3054	11	NIC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-148	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.8610464120759	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTGATTGCCTTCAT	12	False	NA	NA	False	AATAAA	-14	NA	27466614	27594538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.5	chr15	+	3055	13	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-136	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8048503073604	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGATTGCCTTCATGC	24	False	NA	NA	False	AATAAA	-16	NA	27466626	27594540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27466692_27466815_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.6	chr15	+	3607	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-109	0	-109	0	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	-18	True	NA	23	True	ATTAAA	-19	NA	27466653	27594995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.7	chr15	+	3155	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	-108	451	-108	6	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGCCTTCATGCTCCA	-17	True	NA	NA	False	AATAAA	-20	NA	27466654	27594544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.8	chr15	+	3037	12	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.7405333417122	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTGATTGCCTTCAT	48	False	NA	NA	False	AATAAA	-14	NA	27466758	27594538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567608_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.11659.9	chr15	+	3708	13	NNC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.7103090674162	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGCTATTTTCA	48	False	NA	19	True	ATTAAA	-15	NA	27466758	27594991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27584772_27584983_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ES.1166.1	chr1	+	249	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	117416669	117416918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_117416700_117416900
ES.11660.1	chr15	-	4667	1	Genic_Genomic	ENSMUSG00000046034.9	novel	NA	NA	NA	NA	2523	4247	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCTGCAGTTAAATGT	NA	False	NA	NA	False	AATAAA	-29	NA	27606424	27601757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_27601800_27606400
ES.11660.11	chr15	-	1510	7	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	94.4345746476834	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630747	27606008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623500_27630543
ES.11660.12	chr15	-	3544	5	FSM	ENSMUSG00000046034.9	ENSMUST00000228439.2	811	5	-19	-2714	-4	-4	multi-exon	FALSE	canonical	3	12	junction_4	108.380118102907	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630783	27606008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
ES.11660.13	chr15	-	6140	5	NNC	ENSMUSG00000046034.9	novel	811	5	NA	NA	-7	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	134.633762481779	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACAGTAGTTTTGTAT	NA	False	NA	-11	True	AATGAA	-34	NA	27630786	27606010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27610051_27610105_27611724_27616409_27616554_27619614_27619710_27630543
ES.11660.14	chr15	-	1408	7	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	13	-28	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	84.6707676172177	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGGTTTTACTTCTCT	NA	False	NA	-33	True	AAGAAA	-41	NA	27630751	27606032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27606548_27608704_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ES.11660.15	chr15	-	1332	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-7	166	-7	-166	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTATGCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	27630786	27606170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ES.11660.17	chr15	-	3109	7	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-7	-726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.386373089699	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTCCCTTTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	27630786	27606730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27608948_27611597_27611724_27611822_27612006_27614337_27614435_27616409_27616554_27619614_27619710_27630539
ES.11660.18	chr15	-	2903	6	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	726	-8	-726	5prime_fragment	FALSE	canonical	3	220	junction_1	25.2713276263832	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTCCCTTTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	27630787	27606730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ES.11660.19	chr15	-	2805	5	FSM	ENSMUSG00000046034.9	ENSMUST00000228439.2	811	5	-3	-1991	-3	-727	multi-exon	FALSE	canonical	3	12	junction_4	108.380118102907	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAGTCCCTTTTGGATA	NA	False	NA	NA	False	NA	NA	NA	27630767	27606731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
ES.11660.2	chr15	-	3537	5	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	11133	-2422	-10699	2422	3prime_fragment	FALSE	canonical	3	220	junction_2	23.6048194231602	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGCAACTTAAGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	27619646	27603582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614
ES.11660.3	chr15	-	3592	6	NIC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	54	2247	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	98.7825895590918	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAGTTCATCTCAGA	-31	True	NA	NA	False	AGTAAA	-17	NA	27630710	27603757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
ES.11660.4	chr15	-	4907	8	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-7	942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	122.419652950707	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTCTGAATGTGTG	NA	False	NA	NA	False	AATAGA	-13	NA	27630786	27605062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27606548_27608677_27608948_27611597_27611724_27611822_27612549_27612645_27614464_27616409_27616554_27619614_27619710_27630543
ES.11660.5	chr15	-	2418	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-8	-919	-8	919	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATAGAGTGCTGGCA	NA	False	NA	NA	False	AGTAAA	-24	NA	27630787	27605085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ES.11660.6	chr15	-	5226	2	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-2337	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	7997	False	NA	-5	True	AATGAA	-40	NA	27611284	27606004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27610063_27610116
ES.11660.7	chr15	-	1373	6	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	118.295562046934	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630769	27606008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27606548_27608704_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
ES.11660.8	chr15	-	1373	6	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	99.9551899603017	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630738	27606008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630539
ES.11660.9	chr15	-	1577	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	-90	4	-90	-4	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	False	NA	-9	True	AATGAA	-36	NA	27630869	27606008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ES.11661.1	chr15	+	5260	1	Intergenic	novelGene_9724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACACTGGCTATAGCATA	NA	False	NA	NA	False	NA	NA	NA	27979634	27984894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_27979600_27984900
ES.11662.10	chr15	-	4482	1	Intergenic	novelGene_9722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAGAATGTCATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	27804360	27799878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_27799900_27804400
ES.11662.11	chr15	-	3738	1	Intergenic	novelGene_9723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGTGCAAAGAGGGAC	4086	False	NA	NA	False	NA	NA	NA	27980695	27976957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_27977000_27980700
ES.11662.2	chr15	-	11640	57	FSM	ENSMUSG00000022263.11	ENSMUST00000090247.7	11495	57	-145	0	-145	0	multi-exon	FALSE	canonical	0	0	junction_53	4.35113754772056	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGTTAGGCTTTTTA	NA	False	NA	0	True	ATTAAA	-14	NA	28026079	27730736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_27733117_27733591_27733731_27735464_27735666_27736532_27736612_27740660_27740783_27741001_27741165_27741337_27741366_27742457_27742597_27744038_27744287_27748006_27748816_27749864_27750043_27752675_27752868_27753797_27753876_27754098_27754150_27755223_27755317_27756551_27756642_27758425_27758496_27764039_27764144_27765804_27765872_27767970_27768120_27770395_27770492_27772995_27773167_27773966_27774260_27805715_27805960_27818149_27818250_27818985_27819129_27821425_27821528_27824066_27824258_27825748_27825861_27828351_27828445_27830228_27830319_27830797_27830868_27831439_27831550_27832099_27832167_27832836_27832953_27833047_27833243_27838866_27838990_27841812_27841929_27844895_27845011_27846795_27846946_27847373_27847566_27849018_27849139_27851078_27851246_27851902_27852099_27854966_27855142_27856150_27856321_27871246_27871439_27881392_27881516_27889373_27889605_27891426_27891559_27897919_27898112_27901253_27901377_27902583_27903097_27905224_27905418_27912705_27912821_27919302_27919378_28025425
ES.11662.7	chr15	-	4840	15	NIC	ENSMUSG00000022263.11	novel	11495	57	NA	NA	-6634	-3	intron_retention	FALSE	canonical	0	0	junction_7	4.7186127328325	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTTAGGCTTT	7784	False	NA	-3	True	ATTAAA	-11	NA	27755271	27730739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_27733117_27733591_27733731_27735464_27735666_27736532_27736612_27740660_27740783_27741001_27741165_27741337_27741366_27742469_27742597_27744038_27744287_27748006_27748816_27749864_27750043_27752675_27752868_27753797_27753876_27754098_27754150_27755223
ES.11662.8	chr15	-	4889	1	NIC	ENSMUSG00000022263.11	novel	3132	8	NA	NA	980	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTTAGGCTTT	NA	False	NA	-3	True	ATTAAA	-11	NA	27735628	27730739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_27730700_27735600
ES.11662.9	chr15	-	3078	6	ISM	ENSMUSG00000022263.11	ENSMUST00000226644.2	5233	29	85855	0	-7335	0	3prime_fragment	FALSE	canonical	2	7	junction_5	1.6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGTCTCTCATTGT	7083	False	NA	NA	False	TATAAA	-24	NA	27755972	27746985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_27748816_27749864_27750043_27752675_27752868_27753797_27753876_27754098_27754150_27755223
ES.11663.1	chr15	-	176	1	Intergenic	novelGene_9725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGCCACTTA	NA	False	NA	NA	False	NA	NA	NA	28030741	28030565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_28030600_28030700
ES.11664.1	chr15	+	182	1	Intergenic	novelGene_9726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28035184	28035366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_28035200_28035400
ES.11665.1	chr15	-	182	1	Intergenic	novelGene_9727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAAATAGAAAA	NA	False	NA	NA	False	NA	NA	NA	28079317	28079135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_28079100_28079300
ES.11666.1	chr15	-	179	1	Intergenic	novelGene_9728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	29283693	29283514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_29283500_29283700
ES.11667.1	chr15	+	229	1	Intergenic	novelGene_9729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGGCAAATAAAAGTTAC	NA	False	NA	NA	False	NA	NA	NA	29452088	29452317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_29452100_29452300
ES.11668.1	chr15	-	177	1	Intergenic	novelGene_9730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	29490617	29490440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_29490400_29490600
ES.11669.1	chr15	-	7237	2	Intergenic	novelGene_9731	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30095340	30087899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_30094024_30094227
ES.11669.2	chr15	-	7237	2	Intergenic	novelGene_9732	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30095341	30087899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_30094003_30094207
ES.1167.1	chr1	+	3776	3	Antisense	novelGene_ENSMUSG00000026374.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACTGAACATTCAACAA	NA	False	NA	NA	False	NA	NA	NA	118228005	118235863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_118228771_118232423_118232501_118232929
ES.1167.2	chr1	+	1335	6	Antisense	novelGene_ENSMUSG00000026374.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCCAAGGCTGGCGCC	NA	False	NA	NA	False	NA	NA	NA	118228005	118238916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_118228771_118232423_118232501_118232929_118233042_118236470_118236572_118237502_118237596_118238729
ES.11670.1	chr15	+	5310	23	FSM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	-75	709	-75	223	multi-exon	FALSE	canonical	0	0	junction_3	16.7776538711909	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGCTAAGAATGTCTAT	4	True	NA	NA	False	AATAAA	-22	NA	30172663	31028778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.10	chr15	+	4810	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473637	-1303	156	3	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGCCATCTTCCTTTA	79	False	NA	NA	False	NA	NA	NA	30646833	31029490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.11	chr15	+	4883	17	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	474097	-3	158	3	3prime_fragment	FALSE	canonical	2	8	junction_10	13.4530433359891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGCCATCTTCCTTTA	81	False	NA	NA	False	NA	NA	NA	30646835	31029490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.12	chr15	+	4080	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473655	-591	174	223	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGCTAAGAATGTCTAT	-28	True	NA	NA	False	AATAAA	-22	NA	30646851	31028778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.13	chr15	+	2348	10	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473657	105916	176	-98651	internal_fragment	FALSE	canonical	3	25	junction_9	11.0933190883099	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATGTTATTCTGTAA	-26	True	NA	NA	False	AATAAA	-24	NA	30646853	30922271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000
ES.11670.14	chr15	+	2212	9	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473657	122073	176	99068	internal_fragment	FALSE	canonical	3	29	junction_3	10.3795170889594	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATATTGGGCTTAGAAT	-26	True	NA	NA	False	AATAAA	-26	NA	30646853	30906114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805
ES.11670.16	chr15	+	3248	11	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	474118	106388	179	-97823	internal_fragment	FALSE	canonical	2	8	junction_10	16.1802348561447	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTTCCCCGATGTGTG	-23	True	NA	NA	False	NA	NA	NA	30646856	30923099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000
ES.11670.17	chr15	+	2600	10	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	219	99678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	15.5920207513687	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCTGAGGATGTAT	17	True	NA	NA	False	NA	NA	NA	30646896	30906724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30906158
ES.11670.18	chr15	+	3885	17	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	474158	934	219	-2	3prime_fragment	FALSE	canonical	2	8	junction_10	13.4530433359891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTCGTTCTGATATG	17	True	NA	NA	False	NA	NA	NA	30646896	31028553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.19	chr15	+	3693	17	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	240	-164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	15.5310928060456	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTGTGTTTCCTCATC	38	False	NA	NA	False	ATTAAA	-32	NA	30646917	31028391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_30975132_30975199_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.2	chr15	+	5935	22	FSM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	-521	-1303	-63	3	multi-exon	FALSE	canonical	0	0	junction_3	16.3558778189685	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGCCATCTTCCTTTA	16	False	NA	NA	False	NA	NA	NA	30172675	31029490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.20	chr15	+	2020	7	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473812	146343	331	74798	internal_fragment	FALSE	canonical	3	29	junction_3	10.1228564260401	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATCTTTCCTAAATTC	-38	True	NA	NA	False	ATTAAA	-41	NA	30647008	30881844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268
ES.11670.21	chr15	+	1026	4	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	412	13565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.1543438647449	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTGTGAAAACAGA	43	False	NA	NA	False	CATAAA	-24	NA	30647089	30684835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30647471_30669557_30669753_30683360_30683617_30684641
ES.11670.22	chr15	+	4298	16	NNC	ENSMUSG00000022240.11	novel	660	3	NA	NA	16126	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4024873313377	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	30662803	31029457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30662962_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.23	chr15	+	3329	16	NNC	ENSMUSG00000022240.11	novel	660	3	NA	NA	16178	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4024873313377	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATATTTAGCAGTATTGT	NA	False	NA	NA	False	NA	NA	NA	30662855	31028540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30662962_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.24	chr15	+	3084	14	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	602502	714	91936	218	3prime_fragment	FALSE	canonical	2	8	junction_7	14.4283580075107	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCCTTGCTAAGAATG	NA	False	NA	NA	False	AATAAA	-17	NA	30775240	31028773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.25	chr15	+	1334	6	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	91941	83036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.1054495332367	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTAATGTCAAACTT	NA	False	NA	NA	False	TATAAA	-17	NA	30775245	30890082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30889582
ES.11670.26	chr15	+	998	1	Intergenic	novelGene_9734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAATGTTCACATCT	NA	False	NA	NA	False	AATAAA	-17	NA	30822541	30823539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_30822500_30823500
ES.11670.27	chr15	+	4717	3	Intergenic	novelGene_9735	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAAGTCCATTGTCAAT	NA	False	NA	NA	False	AATAAA	-12	NA	30909047	30914358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_30909786_30909881_30910322_30910819
ES.11670.28	chr15	+	2802	1	Intergenic	novelGene_9736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGAAATAAGAGAG	NA	False	NA	NA	False	TTTAAA	-45	NA	30934251	30937053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_30934300_30937100
ES.11670.3	chr15	+	5163	22	FSM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	-460	-592	-2	224	multi-exon	FALSE	canonical	0	0	junction_3	16.3558778189685	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCTAAGAATGTCTATT	32	False	NA	NA	False	AATAAA	-23	NA	30172736	31028779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.4	chr15	+	4651	23	FSM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	197	1096	-177	-164	multi-exon	FALSE	canonical	0	0	junction_3	16.7776538711909	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTGTGTTTCCTCATC	5	True	NA	NA	False	ATTAAA	-32	NA	30172935	31028391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.5	chr15	+	3369	15	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	5	82076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.8864764371395	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCCTAGCTGCTTACT	43	False	NA	NA	False	ATTAAA	-15	NA	30173141	30889122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30888335
ES.11670.6	chr15	+	4500	21	NNC	ENSMUSG00000022240.11	novel	660	3	NA	NA	-44725	218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.2765936239743	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCCTTGCTAAGAATG	NA	False	NA	NA	False	AATAAA	-17	NA	30413093	31028773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30413147_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.7	chr15	+	4312	17	ISM	ENSMUSG00000022240.11	ENSMUST00000081728.7	5944	23	473951	714	12	218	3prime_fragment	FALSE	canonical	2	8	junction_10	13.4530433359891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCCTTGCTAAGAATG	13	False	NA	NA	False	AATAAA	-17	NA	30646689	31028773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30920857_30920933_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11670.8	chr15	+	2311	10	NNC	ENSMUSG00000022240.11	novel	4111	22	NA	NA	139	99309	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	15.5920207513687	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAAAAACCGA	62	False	NA	NA	False	GATAAA	-17	NA	30646816	30906355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30906158
ES.11670.9	chr15	+	3831	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473628	-315	147	-53	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAGGAAAAAAAAA	70	False	NA	NA	False	NA	NA	NA	30646824	31028502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ES.11671.1	chr15	-	177	1	Intergenic	novelGene_9733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATACTC	NA	False	NA	NA	False	NA	NA	NA	30690680	30690503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_30690500_30690700
ES.11672.1	chr15	+	1473	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	81	1	-60	-1	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTCTCTTACGGTTCA	72	False	NA	20	True	AATAAA	-20	NA	31224540	31274486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ES.11672.2	chr15	+	161	1	Intergenic	novelGene_9737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATCTTAAAA	1712	False	NA	NA	False	NA	NA	NA	31226888	31227049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31226900_31227000
ES.11673.1	chr15	-	7128	3	ISM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	42409	-248	-68	248	3prime_fragment	FALSE	canonical	2	3	junction_2	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGGAAATATATTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	31325463	31291375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_31298131_31305137_31305279_31325231
ES.11673.2	chr15	-	7502	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	-33	-3	-33	3	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATTTTCCTGTCATTTG	NA	False	NA	NA	False	AATAAA	-40	NA	31367905	31291620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
ES.11673.3	chr15	-	4876	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	153	2437	-5	180	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACATAGCTCTTCAGGAA	42	False	NA	NA	False	AATAAA	-23	NA	31367719	31294060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
ES.11673.5	chr15	-	4679	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	172	2615	-11	2	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTTCTTCTGTTTGTG	61	False	NA	NA	False	ATTAAA	-17	NA	31367700	31294238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
ES.11673.6	chr15	-	2129	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	153	5184	-5	2	multi-exon	FALSE	canonical	2	3	junction_2	1.88561808316413	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGGGATTCTCCCCTT	42	False	NA	NA	False	AATAAA	-26	NA	31367719	31296807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
ES.11673.7	chr15	-	158	1	Intergenic	novelGene_9738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAATAAATAAATCTTTA	3642	False	NA	NA	False	NA	NA	NA	31335078	31334920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31334900_31335100
ES.11674.1	chr15	+	180	1	Intergenic	novelGene_9739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATCCATGAG	NA	False	NA	NA	False	NA	NA	NA	31382734	31382914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31382700_31382900
ES.11675.1	chr15	-	874	1	Intergenic	novelGene_9740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTACAGGGTTTGTTC	NA	False	NA	NA	False	AATAAA	-23	NA	31418942	31418068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31418100_31418900
ES.11676.1	chr15	-	273	1	Intergenic	novelGene_9741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7552	False	NA	NA	False	AATAAA	-17	NA	31446077	31445804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31445800_31446100
ES.11677.1	chr15	+	4519	11	Antisense	novelGene_ENSMUSG00000115383.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAACCACCACCACCA	NA	False	NA	NA	False	NA	NA	NA	31477378	31491231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_31478642_31480429_31480569_31482643_31482747_31482950_31483072_31485093_31485230_31486072_31486143_31486225_31486296_31486499_31486871_31487059_31488680_31488880_31488997_31490721
ES.11678.1	chr15	+	2440	1	Antisense	novelGene_ENSMUSG00000115224.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTAACTGACAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	31519074	31521514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_31519100_31521500
ES.11679.1	chr15	+	1441	1	Intergenic	novelGene_9743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTTTAGCCCCATGCA	NA	False	NA	NA	False	NA	NA	NA	31531227	31532668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31531200_31532700
ES.1168.1	chr1	-	6843	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	219	1	39	-1	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTGTGTGCAAACGC	NA	False	NA	NA	False	AATAAA	-12	NA	118238927	118222508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.14	chr1	-	2776	7	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	43	1128	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	478.855493163996	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTAGTGTGCTGCTGT	NA	False	NA	-9	True	AATAAA	-19	NA	118238923	118226251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118227025_118227344_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.15	chr1	-	2522	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	23	4518	23	354	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACCCACCCCCACACAC	NA	False	NA	NA	False	NA	NA	NA	118239123	118227025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.17	chr1	-	1964	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	249	4850	69	22	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAACAAAAATAGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	118238897	118227357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.18	chr1	-	1909	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	71	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	408.588007655633	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118238895	118227388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237576_118238731
ES.1168.19	chr1	-	2814	5	FSM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	-1182	-976	68	-263	multi-exon	FALSE	canonical	3	922	junction_2	75.9584590417684	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATTGGCAGTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	118238898	118227642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502
ES.1168.2	chr1	-	3498	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	202	3363	22	1509	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCTGGTTTTAGTA	NA	False	NA	NA	False	ATTAAA	-28	NA	118238944	118225870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.20	chr1	-	1722	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	200	5141	20	-269	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATGTGATTGGC	NA	False	NA	NA	False	AGTAAA	-11	NA	118238946	118227648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.21	chr1	-	2062	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	44	-269	at_least_one_novel_splicesite	FALSE	canonical	2	335	junction_5	277.34988732646	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATGTGATTGGC	NA	False	NA	NA	False	AGTAAA	-11	NA	118238922	118227648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238366
ES.1168.22	chr1	-	1636	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	46	-269	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	401.095799030606	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATGTGATTGGC	NA	False	NA	NA	False	AGTAAA	-11	NA	118238920	118227648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238790
ES.1168.23	chr1	-	2901	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	31	-269	intron_retention	FALSE	canonical	0	0	junction_4	474.035610476681	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCATGTGATTGGC	NA	False	NA	NA	False	AGTAAA	-11	NA	118238935	118227648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118236830_118236887_118237502
ES.1168.25	chr1	-	1510	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	57	5496	57	615	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCTGTCCCTGCTACT	NA	False	NA	46	True	NA	NA	NA	118239089	118228003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.26	chr1	-	1336	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	99	5628	-81	483	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTCCTCCATTTCCAGC	NA	False	NA	-86	True	AGTAAA	-23	NA	118239047	118228135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.27	chr1	-	1543	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	68	475	at_least_one_novel_splicesite	FALSE	canonical	2	335	junction_5	277.34988732646	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCAGATTAGTCCTCCA	NA	False	NA	-94	True	AGTAAA	-15	NA	118238898	118228143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238366
ES.1168.28	chr1	-	3086	3	ISM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	2405	-475	2405	475	3prime_fragment	FALSE	canonical	3	922	junction_2	31	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCAGATTAGTCCTCCA	NA	False	NA	-94	True	AGTAAA	-15	NA	118235311	118228143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_118228768_118232420_118232501_118232929
ES.1168.29	chr1	-	3178	4	ISM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	-1192	-399	58	399	intron_retention	FALSE	canonical	3	922	junction_2	31.5629881700422	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTTGATGTACTGACT	NA	False	NA	NA	False	NA	NA	NA	118238908	118228219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474
ES.1168.3	chr1	-	3390	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	56	1495	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	401.095799030606	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTGAGAAATATTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	118238910	118225884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238790
ES.1168.30	chr1	-	1193	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	57	5813	57	298	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTTTCAGTGCACTTG	NA	False	NA	NA	False	NA	NA	NA	118239089	118228320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.4	chr1	-	3382	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	-56	3737	-10	1135	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCTGCTGTTTGAACT	NA	False	NA	-2	True	AATAAA	-26	NA	118239202	118226244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ES.1168.5	chr1	-	4222	5	FSM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	-1194	-2372	56	1133	multi-exon	FALSE	canonical	3	922	junction_2	75.9584590417684	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118238910	118226246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502
ES.1168.9	chr1	-	3142	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	57	1133	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	402.672770373165	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118239089	118226246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238855
ES.11680.1	chr15	-	6295	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	-36	1	-36	-1	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTGGCTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	31531235	31456037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.10	chr15	-	6299	25	NIC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	35	-9	intron_retention	FALSE	canonical	3	82	junction_10	16.2907608443832	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTTTCTTTTTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	31531164	31456045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.14	chr15	-	4490	18	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	13946	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.7588004679697	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGTTTTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	31490754	31456046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31456343_31456990_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721
ES.11680.15	chr15	-	5561	17	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	-35	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	31.646423079868	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGTTTTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	31531234	31456046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482732_31496174_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.17	chr15	-	5437	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	28	795	28	-795	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAGTTGATGAATTTT	NA	False	NA	0	True	ATTAAA	-17	NA	31531171	31456831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.18	chr15	-	4407	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	42	1811	42	-1811	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGTGTTAACACTGTC	NA	False	NA	NA	False	TTTAAA	-40	NA	31531157	31457847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.19	chr15	-	4326	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	-4	1938	-4	-1938	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCTTTCTGGTTTTGTT	NA	False	NA	NA	False	AATACA	-23	NA	31531203	31457974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.2	chr15	-	6199	25	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.2762944931496	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531183	31456044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467922_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.20	chr15	-	3962	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	61	2237	61	-2237	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTGAGTTGGCCTTCG	NA	False	NA	NA	False	AATAAA	-27	NA	31531138	31458273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.22	chr15	-	3252	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	-8	3016	-8	-3016	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAATTTATTAAATCTAG	NA	False	NA	-30	True	ATTAAA	-34	NA	31531207	31459052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.24	chr15	-	2976	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	13	3271	13	-3271	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGCCTTTTCGTGTCCT	NA	False	NA	-1	True	AATAAA	-27	NA	31531186	31459307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.25	chr15	-	172	1	Intergenic	novelGene_9742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGGGGGAGGGGATAG	NA	False	NA	NA	False	NA	NA	NA	31471554	31471382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31471400_31471600
ES.11680.26	chr15	-	4775	2	Genic_Genomic	ENSMUSG00000039100.11	novel	6260	26	NA	NA	-5268	-6792	multi-exon	TRUE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAGCACTAATATT	NA	False	NA	NA	False	NA	NA	NA	31477405	31472188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_31472572_31473013
ES.11680.3	chr15	-	6317	26	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	-50	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	25.5607824606368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531249	31456044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471960_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.5	chr15	-	5782	24	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.7178888758734	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531203	31456044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31459208_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483033_31486236_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.7	chr15	-	5875	27	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.6845911949572	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531183	31456044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31458544_31458904_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11680.8	chr15	-	5937	27	NNC	ENSMUSG00000039100.11	novel	6260	26	NA	NA	27	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.6845911949572	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTCTTTTTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	31531172	31456044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31457763_31458050_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ES.11681.1	chr15	-	177	1	Intergenic	novelGene_9744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGTTACC	NA	False	NA	NA	False	NA	NA	NA	31551912	31551735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31551700_31551900
ES.11682.1	chr15	+	156	1	Intergenic	novelGene_9745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31559191	31559347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31559200_31559300
ES.11682.2	chr15	+	260	1	Intergenic	novelGene_9746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGATTTCTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	31559191	31559451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31559200_31559500
ES.11683.1	chr15	-	5137	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	0	1657	intron_retention	FALSE	canonical	3	5476	junction_4	306.206527526766	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTGAGACCATTGCTC	NA	False	NA	NA	False	NA	NA	NA	31601886	31589288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.10	chr15	-	1701	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	17	-80	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	1800.99954469733	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTGCAGTTACTGCTG	NA	False	NA	-27	True	AATAAA	-18	NA	31601933	31591025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592485_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.11	chr15	-	3003	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-2	-81	intron_retention	FALSE	canonical	3	5476	junction_5	296.264813142183	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCTGCAGTTACTGCT	NA	False	NA	-28	True	AATAAA	-17	NA	31601952	31591026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.12	chr15	-	2222	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	12	-81	intron_retention	FALSE	canonical	3	5476	junction_5	321.299598659515	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCTGCAGTTACTGCT	NA	False	NA	-28	True	AATAAA	-17	NA	31601938	31591026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.13	chr15	-	2853	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-28	-82	intron_retention	FALSE	canonical	3	5476	junction_6	306.66521738788	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGTCTGCAGTTACTGC	NA	False	NA	-29	True	AATAAA	-16	NA	31601914	31591027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.14	chr15	-	3426	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-28	-82	intron_retention	FALSE	canonical	3	5476	junction_4	304.132963315389	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGTCTGCAGTTACTGC	NA	False	NA	-29	True	AATAAA	-16	NA	31601914	31591027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593199_31593660_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.17	chr15	-	3367	8	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	3	-82	intron_retention	FALSE	canonical	3	5476	junction_4	344.045203484682	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGTCTGCAGTTACTGC	NA	False	NA	-29	True	AATAAA	-16	NA	31601883	31591027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.18	chr15	-	4577	8	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	2	-83	intron_retention	FALSE	canonical	3	5476	junction_4	312.244409763524	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601948	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.2	chr15	-	679	1	Antisense	novelGene_ENSMUSG00000022235.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCAATAGTTGACAGTG	5496	False	NA	NA	False	NA	NA	NA	31590334	31589655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_31589700_31590300
ES.11683.20	chr15	-	1698	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	1	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1842.67486008791	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601885	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597563_31597722_31598145_31598207_31601746
ES.11683.21	chr15	-	1699	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	1	-83	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	1847.77498900705	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601885	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594383_31594475_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.23	chr15	-	4697	7	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-2	-83	intron_retention	FALSE	canonical	3	5476	junction_3	325.646749646846	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601888	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592930_31593012_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.24	chr15	-	1539	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-14	-83	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	1893.16738970227	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601900	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.26	chr15	-	1630	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	14	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1846.06830859532	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601936	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594566_31595809_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.27	chr15	-	3298	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-12	-83	intron_retention	FALSE	canonical	3	5476	junction_5	322.577025685339	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601898	31591028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.29	chr15	-	2939	10	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-12	-84	intron_retention	FALSE	canonical	1	8	junction_2	1901.01073181325	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601898	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31592612_31592791_31592923_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.3	chr15	-	2566	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	46	-759	-18	759	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCTGGTTTTGTACAT	NA	False	NA	NA	False	AATATA	-15	NA	31601904	31590186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.30	chr15	-	1697	12	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-25	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2349.51030945065	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601911	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595848_31595967_31595990_31597556_31597722_31598058_31598207_31601746
ES.11683.31	chr15	-	3373	9	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-3	-84	intron_retention	TRUE	canonical	0	0	junction_5	2046.24007328075	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601953	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593781_31594242_31594414_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.32	chr15	-	1673	12	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	29	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1761.79252725482	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601921	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746_31601833_31601899
ES.11683.33	chr15	-	1105	7	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-25	-84	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2236.63934409541	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601911	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.34	chr15	-	4259	8	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-27	-84	intron_retention	FALSE	canonical	3	5476	junction_4	310.330436135157	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTCTGCAGTTACT	NA	False	NA	-31	True	AATAAA	-44	NA	31601913	31591029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.35	chr15	-	1598	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-14	-85	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1928.24851121106	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCGTCTGCAGTTAC	NA	False	NA	-32	True	AATAAA	-43	NA	31601900	31591030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.37	chr15	-	3406	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-11	-85	intron_retention	FALSE	canonical	3	5476	junction_4	306.206527526766	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCGTCTGCAGTTAC	NA	False	NA	-32	True	AATAAA	-43	NA	31601897	31591030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.39	chr15	-	1682	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	8	-92	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	1833.64102266501	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTTGTGCTGCGTCTG	NA	False	NA	-39	True	AATAAA	-36	NA	31601878	31591037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592923_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.4	chr15	-	1925	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-73	1	-73	-1	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAGCTTGATAGAGGA	NA	False	NA	-4	True	AATAAA	-29	NA	31602023	31590946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.40	chr15	-	4653	7	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-1	-97	intron_retention	FALSE	canonical	3	5789	junction_3	241.021034121275	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGTCTGTTGTGCTGC	NA	False	NA	-44	True	AATAAA	-31	NA	31601951	31591042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593781_31594242_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.41	chr15	-	1750	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-1	104	-1	-104	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGGGTGTGTCTGTT	NA	False	NA	-51	True	AATAAA	-24	NA	31601951	31591049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.42	chr15	-	3039	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	22	-104	intron_retention	FALSE	canonical	3	5476	junction_4	310.930835355711	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGGGTGTGTCTGTT	NA	False	NA	-51	True	AATAAA	-24	NA	31601928	31591049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.43	chr15	-	1733	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	10	-104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1845.17382379005	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGGGTGTGTCTGTT	NA	False	NA	-51	True	AATAAA	-24	NA	31601940	31591049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593775_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.44	chr15	-	1691	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-28	-105	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	1828.02516667578	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAAGGGTGTGTCTGT	NA	False	NA	-52	True	AATAAA	-23	NA	31601914	31591050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593681_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.45	chr15	-	1648	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	29	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1839.18014615208	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAAGGGTGTGTCTGT	NA	False	NA	-52	True	AATAAA	-23	NA	31601857	31591050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598152_31598207_31601746
ES.11683.46	chr15	-	1638	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1833.34978932008	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAAGGGTGTGTCTGT	NA	False	NA	-52	True	AATAAA	-23	NA	31601886	31591050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593153_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.47	chr15	-	1538	10	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	7	-106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1915.82782287803	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATAAAGGGTGTGTCTG	NA	False	NA	-53	True	AATAAA	-22	NA	31601879	31591051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.48	chr15	-	1677	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-3	-107	at_least_one_novel_splicesite	FALSE	canonical	2	336	junction_1	1722.22229691756	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATAAAGGGTGTGTCT	NA	False	NA	-54	True	AATAAA	-21	NA	31601889	31591052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591194_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.49	chr15	-	1600	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-11	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1847.77498900705	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATAAAGGGTGTGTCT	NA	False	NA	-54	True	AATAAA	-21	NA	31601897	31591052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594572_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.6	chr15	-	1766	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-14	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	1845.77205797466	1913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCACTTATTCAG	NA	False	NA	-18	True	AATAAA	-15	NA	31601900	31590960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594651_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ES.11683.7	chr15	-	1885	11	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-13	-15	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	1800.94970779309	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCACTTATTCAG	101	False	NA	-18	True	AATAAA	-15	NA	31601698	31590960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601447
ES.11683.9	chr15	-	4226	9	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	-43	-17	intron_retention	FALSE	canonical	3	5476	junction_5	297.88606777592	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGCTTCCACTTATTC	NA	False	NA	-20	True	AATAAA	-13	NA	31601993	31590962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31595990_31597556_31597722_31598145_31598207_31601746
ES.11684.1	chr15	+	1160	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	4	0	4	0	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCGTGACAAGGAGTG	119	False	NA	27	True	ATTAAA	-27	NA	31602267	31617681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ES.11684.2	chr15	+	4684	3	NNC	ENSMUSG00000039065.12	novel	4655	2	NA	NA	6	523	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATCTATGCAGTGCTTA	121	False	NA	NA	False	NA	NA	NA	31602269	31621896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_31602296_31617016_31619099_31619320
ES.11684.3	chr15	+	1268	6	FSM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	13	1083	13	-9	multi-exon	FALSE	canonical	0	0	junction_1	11.3490087672889	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGCTTTATAACCGTGA	128	False	NA	18	True	ATTAAA	-18	NA	31602276	31617672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_31602296_31603594_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ES.11685.1	chr15	-	159	1	Antisense	novelGene_ENSMUSG00000039065.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	31619317	31619158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_31619200_31619300
ES.11686.1	chr15	+	2795	1	Intergenic	novelGene_9747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCTTGATGATGATTT	NA	False	NA	NA	False	AATAAA	-23	NA	31627705	31630500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_31627700_31630500
ES.11687.1	chr15	-	167	1	Intergenic	novelGene_9748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	31640753	31640586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_31640600_31640800
ES.11688.1	chr15	+	5065	23	FSM	ENSMUSG00000022231.11	ENSMUST00000067458.7	10809	23	-56	5800	-53	905	multi-exon	TRUE	canonical	0	0	junction_1	0.868407871570127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTTGCAGTCACACTG	33	False	NA	NA	False	ATTAAA	-16	NA	32244902	32690687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_32245446_32347365_32347463_32417457_32417656_32460364_32460465_32474523_32474570_32538810_32538874_32548860_32548960_32550394_32550609_32562636_32562923_32568857_32568994_32574961_32575167_32609368_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32669550_32669777_32673462_32673682_32679240_32679412_32681611_32681768_32682452_32682501_32686782_32686995_32689441
ES.11688.3	chr15	+	4832	23	FSM	ENSMUSG00000022231.11	ENSMUST00000067458.7	10809	23	6	5971	-3	734	multi-exon	FALSE	canonical	0	0	junction_1	0.868407871570127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTATGCAGTGTTT	95	False	NA	NA	False	AATGAA	-38	NA	32244964	32690516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_32245446_32347365_32347463_32417457_32417656_32460364_32460465_32474523_32474570_32538810_32538874_32548860_32548960_32550394_32550609_32562636_32562923_32568857_32568994_32574961_32575167_32609368_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32669550_32669777_32673462_32673682_32679240_32679412_32681611_32681768_32682452_32682501_32686782_32686995_32689441
ES.11688.4	chr15	+	10448	23	NIC	ENSMUSG00000022231.11	novel	5442	8	NA	NA	371	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.868407871570127	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAATTGGTGGCATT	498	False	NA	NA	False	AATAAA	-12	NA	32245619	32696478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_32245755_32347365_32347463_32417457_32417656_32460364_32460465_32474523_32474570_32538810_32538874_32548860_32548960_32550394_32550609_32562636_32562923_32568857_32568994_32574961_32575167_32609368_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32669550_32669777_32673462_32673682_32679240_32679412_32681611_32681768_32682452_32682501_32686782_32686995_32689441
ES.11688.5	chr15	+	177	1	Intergenic	novelGene_9749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	32470074	32470251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_32470100_32470300
ES.11688.6	chr15	+	3270	6	NNC	ENSMUSG00000022231.11	novel	2774	14	NA	NA	7636	-17637	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGCCTCTGTAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	32609456	32661103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32658545
ES.11689.1	chr15	+	3501	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	-174	200	-174	-200	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAGACTCACATCCAAT	NA	False	NA	NA	False	AATAAA	-26	NA	32920694	33034881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ES.11689.2	chr15	+	3358	3	ISM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	-161	8785	-161	-8785	5prime_fragment	FALSE	canonical	3	85	junction_1	4.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGGTCAAAGCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	32920707	33026296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_32921452_33017247_33017360_33023794
ES.11689.3	chr15	+	2282	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	-59	1304	-59	-1304	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTCACTGTTATAAAT	5	True	NA	NA	False	AATAAA	-19	NA	32920809	33033777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ES.11689.4	chr15	+	1164	5	NNC	ENSMUSG00000022261.7	novel	3527	5	NA	NA	37	-2324	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	43.1124981878805	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTGTTATCTGTTT	63	False	NA	NA	False	AATAAA	-20	NA	32920905	33032757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_32921452_33017249_33017360_33023794_33023932_33028192_33028329_33032522
ES.11689.5	chr15	+	3439	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	88	0	88	0	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTGAGTATTGCT	114	False	NA	NA	False	ATTAAA	-44	NA	32920956	33035081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ES.11689.8	chr15	+	1775	1	Intergenic	novelGene_9751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGTAGCCAAACAATG	NA	False	NA	NA	False	ATTAAA	-34	NA	32936182	32937957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_32936200_32938000
ES.1169.1	chr1	+	175	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAGAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	118241385	118241560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_118241400_118241600
ES.11690.1	chr15	-	3805	1	Intergenic	novelGene_9750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCACTGTGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	32938340	32934535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_32934500_32938300
ES.11691.1	chr15	+	2308	1	Intergenic	novelGene_9753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAGAAAGAA	144	False	NA	NA	False	NA	NA	NA	33221529	33223837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_33221500_33223800
ES.11691.2	chr15	+	1189	2	Intergenic	novelGene_9752	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAGAA	144	False	NA	NA	False	NA	NA	NA	33221529	33223812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_33221674_33222767
ES.11692.1	chr15	-	4007	1	FSM	ENSMUSG00000038984.5	ENSMUST00000042021.5	4010	1	5	-2	5	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTATTTAATATTACAAA	NA	False	NA	NA	False	AATAAA	-21	NA	33688025	33684018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_33684000_33688000
ES.11693.1	chr15	+	7042	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	0	-4136	0	4136	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_33831600_33838600
ES.11693.2	chr15	+	6944	3	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4136	multi-exon	FALSE	non_canonical	0	0	junction_1	58.5	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33836982_33837043_33837513_33837548
ES.11693.3	chr15	+	6602	5	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4112	multi-exon	TRUE	non_canonical	0	0	junction_1	50.6624861213897	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33831593	33838611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33832047_33832292_33832339_33832410_33836982_33837043_33837513_33837548
ES.11693.4	chr15	+	7006	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	0	4136	multi-exon	FALSE	canonical	3	117	junction_1	0	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33837513_33837548
ES.11693.5	chr15	+	2996	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	1	-91	1	91	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAGCACAGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	33831594	33834590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_33831600_33834600
ES.11693.6	chr15	+	2653	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	1	4136	multi-exon	FALSE	canonical	3	15	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831594	33838635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33831870_33836257
ES.11693.7	chr15	+	4338	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	1	-1433	1	1433	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGCTTCAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	33831594	33835932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_33831600_33835900
ES.11693.8	chr15	+	6946	3	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	1	4136	multi-exon	FALSE	non_canonical	0	0	junction_1	0	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831594	33838635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33836982_33837043_33837499_33837531
ES.11693.9	chr15	+	3940	2	Genic_Genomic	ENSMUSG00000115318.2	novel	2906	1	NA	NA	1601	2697	multi-exon	FALSE	non_canonical	0	0	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTTTAAGACCTAAAGA	NA	False	NA	NA	False	NA	NA	NA	33833194	33837196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_33836982_33837043
ES.11694.1	chr15	+	168	1	Intergenic	novelGene_9754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	33990167	33990335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_33990200_33990300
ES.11695.1	chr15	-	3945	1	Intergenic	novelGene_9755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	485	False	NA	NA	False	NA	NA	NA	34082766	34078821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34078800_34082800
ES.11696.1	chr15	+	5018	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-58	1959	-33	-1959	multi-exon	TRUE	canonical	3	477	junction_6	48.3699585751527	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATATTCAAAGTTACAA	-6	True	NA	NA	False	ATTAAA	-31	NA	34082806	34143811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.10	chr15	+	3629	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-10	1102	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	219.086649524794	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTGTTTTTATTTGC	17	True	NA	11	True	AATAAA	-12	NA	34082829	34142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136819_34136974_34139886_34140044_34140837
ES.11696.11	chr15	+	3718	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-35	3236	-10	1105	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTATTTGCTTC	17	True	NA	14	True	AATAAA	-15	NA	34082829	34142534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.12	chr15	+	3621	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-10	1107	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTTATTTGCTTCAC	17	True	NA	16	True	AATAAA	-17	NA	34082829	34142536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.13	chr15	+	3365	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-8	1103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	170.150201025714	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	19	True	NA	12	True	AATAAA	-13	NA	34082831	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34141186
ES.11696.14	chr15	+	4802	11	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-7	-2087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	224.657628403756	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	20	True	NA	25	True	AATAAA	-26	NA	34082832	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140048_34140837
ES.11696.15	chr15	+	4810	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-6	-2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.952361818484	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	21	True	NA	25	True	AATAAA	-26	NA	34082833	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083049_34083101_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.16	chr15	+	3398	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-31	3552	-6	789	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTGTTTTCATGTGG	21	True	NA	NA	False	AGTAAA	-40	NA	34082833	34142218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.17	chr15	+	5002	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-6	-2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.069692701544	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	21	True	NA	22	True	AATAAA	-23	NA	34082833	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34097322_34097465_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.18	chr15	+	4764	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-6	-2087	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	21	True	NA	25	True	AATAAA	-26	NA	34082833	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.2	chr15	+	6224	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-32	-2087	intron_retention	FALSE	canonical	3	477	junction_5	38.4656990057376	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	-5	True	NA	25	True	AATAAA	-26	NA	34082807	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.20	chr15	+	3555	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-6	1103	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	21	True	NA	12	True	AATAAA	-13	NA	34082833	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.21	chr15	+	1663	9	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-30	11281	-5	-1	5prime_fragment	FALSE	canonical	3	477	junction_6	54.812749429307	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAAAGAAGAAAA	22	True	NA	NA	False	GATAAA	-36	NA	34082834	34134489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436
ES.11696.22	chr15	+	4638	10	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-5	-2087	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	187.311979803156	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	22	True	NA	25	True	AATAAA	-26	NA	34082834	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.23	chr15	+	4673	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-5	-2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	169.938686074694	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	22	True	NA	22	True	AATAAA	-23	NA	34082834	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118211_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.24	chr15	+	4791	12	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-4	-2090	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	235.916500146391	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	23	True	NA	22	True	AATAAA	-23	NA	34082835	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.25	chr15	+	2294	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-29	4654	-4	-173	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGAGAGTCTTTTCAA	23	True	NA	NA	False	AATAAA	-32	NA	34082835	34141116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.26	chr15	+	2602	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-27	4344	-2	-3	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGTCATTTATCATTT	25	False	NA	NA	False	ATTAAA	-19	NA	34082837	34141426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.27	chr15	+	2635	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-1	97	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	167.978689124543	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTATGACTTACAAAGT	26	False	NA	NA	False	ATTAAA	-26	NA	34082838	34141526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.28	chr15	+	2129	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAATAAAAAAGAAGA	27	False	NA	NA	False	NA	NA	NA	34082839	34140865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.29	chr15	+	4843	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	-2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	224.582220030258	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	28	False	NA	22	True	AATAAA	-23	NA	34082840	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114947_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134443_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.3	chr15	+	4978	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-31	-2087	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	-4	True	NA	25	True	AATAAA	-26	NA	34082808	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.30	chr15	+	3793	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	1101	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCATTGTTTTTATTTG	28	False	NA	10	True	AATAAA	-11	NA	34082840	34142530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.31	chr15	+	5625	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	-2093	intron_retention	FALSE	canonical	1	2	junction_4	215.722043379901	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTGTTACATTCTCT	28	False	NA	19	True	AATAAA	-20	NA	34082840	34143677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34115122_34115420_34115506_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.32	chr15	+	4861	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-24	2082	1	-2082	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTCTGTGGGAAGGGA	28	False	NA	30	True	AATAAA	-31	NA	34082840	34143688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.33	chr15	+	5092	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	3	-2090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	211.193483564243	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	30	False	NA	22	True	AATAAA	-23	NA	34082842	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34133596_34133838_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.34	chr15	+	4859	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	4	-2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	169.938686074694	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	31	False	NA	25	True	AATAAA	-26	NA	34082843	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118019_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.35	chr15	+	3782	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	8	1102	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	208.804184584505	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTGTTTTTATTTGC	35	False	NA	11	True	AATAAA	-12	NA	34082847	34142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34115420_34115506_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.36	chr15	+	4520	9	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	9	-2087	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	183.002049168855	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	36	False	NA	25	True	AATAAA	-26	NA	34082848	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.37	chr15	+	1987	3	ISM	ENSMUSG00000022255.17	ENSMUST00000170553.8	659	6	-618	8552	10	-4	5prime_fragment	FALSE	canonical	3	602	junction_1	10	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGAATGTTGTTGCTG	37	False	NA	NA	False	ATTAAA	-30	NA	34082849	34115344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34083560_34099629_34099732_34114169
ES.11696.38	chr15	+	4485	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-15	2449	10	1892	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCATTTGTGCATG	37	False	NA	NA	False	AATAAA	-26	NA	34082849	34143321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.4	chr15	+	4724	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-24	-2087	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	3	True	NA	25	True	AATAAA	-26	NA	34082815	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.40	chr15	+	2780	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	10	97	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTATGACTTACAAAGT	37	False	NA	NA	False	ATTAAA	-26	NA	34082849	34141526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.41	chr15	+	4794	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	11	-2091	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	162.952361818484	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTTACATTCTCTGT	38	False	NA	21	True	AATAAA	-22	NA	34082850	34143679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34141498_34141545
ES.11696.42	chr15	+	3759	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-12	1103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	236.243915265558	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	40	False	NA	12	True	AATAAA	-13	NA	34082852	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134550_34136861_34136974_34139886_34140044_34140837
ES.11696.43	chr15	+	5310	6	NIC	ENSMUSG00000022255.17	novel	659	6	NA	NA	-12	1841	intron_retention	FALSE	canonical	1	10	junction_3	281.150208963109	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATATAAAAGTGTGTTG	40	False	NA	NA	False	GATAAA	-11	NA	34082852	34126339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34116456_34118257_34121568_34121659_34123813
ES.11696.44	chr15	+	9027	8	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	477	junction_3	45.7160713936956	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGTCATTTATCATT	40	False	NA	NA	False	ATTAAA	-18	NA	34082852	34141425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34140044_34140837
ES.11696.45	chr15	+	3671	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-12	1102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.796335946264	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTGTTTTTATTTGC	40	False	NA	11	True	AATAAA	-12	NA	34082852	34142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115115_34116470_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.46	chr15	+	4619	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-8	-2090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	212.536550089548	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	44	False	NA	22	True	AATAAA	-23	NA	34082856	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837_34141334_34141394
ES.11696.47	chr15	+	1290	4	ISM	ENSMUSG00000022255.17	ENSMUST00000170050.8	1147	9	-605	21610	-5	-1	5prime_fragment	FALSE	canonical	3	565	junction_3	23.6126143312331	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATGTTGTTGCTGCTT	47	False	NA	NA	False	ATTAAA	-33	NA	34082859	34115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944
ES.11696.48	chr15	+	5058	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-3	-1954	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAAAGTTACAAACCTC	49	False	NA	NA	False	ATTAAA	-36	NA	34082861	34143816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.49	chr15	+	2525	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	169.332525322902	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCATTTATCATTTATTTA	49	False	NA	NA	False	ATTAAA	-24	NA	34082861	34141431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139944_34140044_34140837
ES.11696.5	chr15	+	4959	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-17	-2087	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	208.804184584505	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	10	True	NA	25	True	AATAAA	-26	NA	34082822	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34115420_34115506_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.50	chr15	+	4570	14	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-3	-2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	208.748057426386	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	49	False	NA	25	True	AATAAA	-26	NA	34082861	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34140969_34141037_34141345_34141540
ES.11696.51	chr15	+	3251	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-2	770	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTATTGATGTGA	50	False	NA	NA	False	AGTAAA	-21	NA	34082862	34142199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.53	chr15	+	3540	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-2	1101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.630662216236	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCATTGTTTTTATTTG	50	False	NA	10	True	AATAAA	-11	NA	34082862	34142530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083061_34083102_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.54	chr15	+	4814	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-2	-2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	169.883820291087	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	50	False	NA	25	True	AATAAA	-26	NA	34082862	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123908_34131324_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.55	chr15	+	6621	11	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	249.850455272749	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTTGTGTTTTAT	51	False	NA	3	True	NA	NA	NA	34082863	34145772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34140837_34145578_34145622
ES.11696.56	chr15	+	3451	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-1	782	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGAGTGGCTTGTTTT	51	False	NA	NA	False	AGTAAA	-33	NA	34082863	34142211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.57	chr15	+	4567	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	1899	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	197.527406677881	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGCATGCATTTTA	52	False	NA	NA	False	AATAAA	-33	NA	34082864	34143328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.58	chr15	+	4890	12	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-1962	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	235.916500146391	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCAAATATTCAAAGTTA	52	False	NA	NA	False	ATTAAA	-28	NA	34082864	34143808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.59	chr15	+	5184	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	1103	intron_retention	FALSE	canonical	3	477	junction_5	50.4063488064748	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	52	False	NA	12	True	AATAAA	-13	NA	34082864	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.6	chr15	+	2718	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	-42	4243	-17	98	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGACTTACAAAGTT	10	True	NA	NA	False	ATTAAA	-27	NA	34082822	34141527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.60	chr15	+	4572	10	FSM	ENSMUSG00000022255.17	ENSMUST00000163333.9	1593	10	-588	-2391	1	-2090	multi-exon	FALSE	canonical	3	69	junction_9	216.816757131084	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	53	False	NA	22	True	AATAAA	-23	NA	34082865	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.63	chr15	+	3738	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	1101	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	212.939088838934	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCATTGTTTTTATTTG	53	False	NA	10	True	AATAAA	-11	NA	34082865	34142530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34113148_34113209_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.64	chr15	+	4358	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	1	1880	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAATTACCATGTTT	53	False	NA	NA	False	AATAAA	-14	NA	34082865	34143309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.65	chr15	+	3631	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	3	1103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	162.952361818484	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	55	False	NA	12	True	AATAAA	-13	NA	34082867	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34141036_34141082
ES.11696.66	chr15	+	3418	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-2	1103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	238.114759913973	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	56	False	NA	12	True	AATAAA	-13	NA	34082868	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34141186
ES.11696.67	chr15	+	4862	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-2	-1954	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAAAGTTACAAACCTC	56	False	NA	NA	False	ATTAAA	-36	NA	34082868	34143816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.69	chr15	+	4879	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	6	-2090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.53670768957	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	64	False	NA	22	True	AATAAA	-23	NA	34082876	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116513_34118043_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.7	chr15	+	5554	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	212.536550089548	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGGCTTGTGTT	10	True	NA	-1	True	NA	NA	NA	34082822	34145768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837_34143850_34145097
ES.11696.71	chr15	+	6858	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	162.952361818484	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTTGTGTTTTAT	70	False	NA	3	True	NA	NA	NA	34082882	34145772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34145578_34145622
ES.11696.72	chr15	+	3596	12	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	12	1103	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	235.916500146391	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGTTTTTATTTGCT	70	False	NA	12	True	AATAAA	-13	NA	34082882	34142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.73	chr15	+	4257	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	12	-2090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	162.952361818484	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	70	False	NA	22	True	AATAAA	-23	NA	34082882	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34141937_34142490
ES.11696.74	chr15	+	2484	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	13	24	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTTGGTTTAGTT	71	False	NA	NA	False	ATTAAA	-24	NA	34082883	34141453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.75	chr15	+	4047	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	18	1592	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCAGTTCTCTTAAAA	76	False	NA	NA	False	NA	NA	NA	34082888	34143021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.76	chr15	+	4754	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	28	-2088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	162.952361818484	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTACATTCTCTGTGGG	86	False	NA	24	True	AATAAA	-25	NA	34082898	34143682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837_34141940_34141982
ES.11696.77	chr15	+	4678	12	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	38	-2087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	261.240208009777	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	96	False	NA	25	True	AATAAA	-26	NA	34082908	34143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34114255_34117588_34117632_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.78	chr15	+	4828	13	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	81	-2090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	212.574104725858	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	139	False	NA	22	True	AATAAA	-23	NA	34082951	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34107892_34107979_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.79	chr15	+	6963	8	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	81	1101	intron_retention	FALSE	canonical	3	69	junction_7	177.39613230029	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCATTGTTTTTATTTG	139	False	NA	10	True	AATAAA	-11	NA	34082951	34142530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.8	chr15	+	6372	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-15	-2090	intron_retention	FALSE	canonical	3	477	junction_5	50.4063488064748	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	12	True	NA	22	True	AATAAA	-23	NA	34082824	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.80	chr15	+	6661	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	96	1	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTTGTGTTTTA	154	False	NA	2	True	NA	NA	NA	34082966	34145771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.81	chr15	+	2298	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	110	-7	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAGGTCATTTATC	168	False	NA	NA	False	ATTAAA	-15	NA	34082980	34141422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ES.11696.82	chr15	+	3935	9	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-65	-2090	combination_of_known_junctions	FALSE	canonical	3	78	junction_4	166.593067082637	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	NA	False	NA	22	True	AATAAA	-23	NA	34114167	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.83	chr15	+	1793	9	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	32078	4246	-145	95	3prime_fragment	FALSE	canonical	3	477	junction_3	50.1047340577714	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGTATGACTTACAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	34114942	34141524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.84	chr15	+	5106	6	NIC	ENSMUSG00000022255.17	novel	1070	10	NA	NA	1437	-2090	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	188.447764645803	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	NA	False	NA	22	True	AATAAA	-23	NA	34116524	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.85	chr15	+	5005	1	FSM	ENSMUSG00000115276.2	ENSMUST00000228274.2	3745	1	-2143	883	-2143	-883	mono-exon	FALSE	NA	NA	NA	NA	NA	727	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAGTATTTGGTATTA	1226	False	NA	NA	False	NA	NA	NA	34124946	34129951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34124900_34130000
ES.11696.86	chr15	+	4489	2	Genic_Genomic	ENSMUSG00000115276.2	novel	3745	1	NA	NA	-1120	25	multi-exon	FALSE	non_canonical	0	0	junction_1	0	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTACATAGTCTGTCAT	2249	False	NA	NA	False	AAGAAA	-6	NA	34125969	34130859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_34130267_34130667
ES.11696.87	chr15	+	3378	5	ISM	ENSMUSG00000022255.17	ENSMUST00000169905.2	1070	10	16218	-2824	-4	-2090	3prime_fragment	FALSE	canonical	3	528	junction_1	19.9624647776771	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	74	False	NA	22	True	AATAAA	-23	NA	34131305	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.88	chr15	+	3251	4	ISM	ENSMUSG00000022255.17	ENSMUST00000171711.2	1200	5	799	-2251	799	-2090	3prime_fragment	FALSE	canonical	3	531	junction_3	19.258475767539	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	54	False	NA	22	True	AATAAA	-23	NA	34134434	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34134545_34136832_34136974_34139886_34140044_34140837
ES.11696.9	chr15	+	5939	11	NNC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	-11	-2090	intron_retention	FALSE	canonical	1	2	junction_3	170.042935754473	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACATTCTCTGTG	16	True	NA	22	True	AATAAA	-23	NA	34082828	34143680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34083560_34099629_34099732_34114169_34115506_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ES.11697.1	chr15	-	3775	2	Antisense	novelGene_ENSMUSG00000022255.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTTTCAGGGCCATAA	NA	False	NA	NA	False	NA	NA	NA	34089308	34085491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_34086241_34086282
ES.11697.2	chr15	-	2281	1	Intergenic	novelGene_9756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGGCAGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	34089308	34087027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34087000_34089300
ES.11698.1	chr15	-	388	1	Intergenic	novelGene_9757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	6613	False	NA	NA	False	AAAAAG	-17	NA	34092911	34092523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34092500_34092900
ES.11699.1	chr15	-	221	1	Intergenic	novelGene_9758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTGAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	34183337	34183116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34183100_34183300
ES.117.1	chr1	+	2555	10	Antisense	novelGene_ENSMUSG00000103506.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTGCGAAGATCAGC	NA	False	NA	NA	False	NA	NA	NA	13235205	13291617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_13235327_13237119_13237331_13244302_13245575_13247299_13247446_13250704_13250848_13251438_13251542_13254398_13254588_13256956_13257142_13260316_13260415_13291530
ES.1170.1	chr1	+	1673	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	-15	231	-15	-231	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTCCTTTTTGTCCAG	NA	False	NA	25	True	AATATA	-19	NA	118249553	118261321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ES.1170.2	chr1	+	1904	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	0	-15	0	15	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTATTTATTTATT	NA	False	NA	21	True	NA	NA	NA	118249568	118261567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ES.1170.3	chr1	+	1620	7	NNC	ENSMUSG00000026377.13	novel	1889	7	NA	NA	13	-233	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	170.081026441974	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAAGCTTCCTTTTTGTCC	NA	False	NA	23	True	AATATA	-17	NA	118249596	118261319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118249728_118251311_118251448_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ES.1170.4	chr1	+	3304	6	NIC	ENSMUSG00000026377.13	novel	1889	7	NA	NA	18	-233	intron_retention	FALSE	canonical	3	402	junction_5	31.9837458719269	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAAGCTTCCTTTTTGTCC	NA	False	NA	23	True	AATATA	-17	NA	118249601	118261319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118260209_118260479
ES.1170.5	chr1	+	1854	7	NNC	ENSMUSG00000026377.13	novel	1889	7	NA	NA	19	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	170.081026441974	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTTTTTTAAATTTATT	NA	False	NA	13	True	NA	NA	NA	118249602	118261559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118249728_118251311_118251448_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ES.1170.6	chr1	+	3439	6	NIC	ENSMUSG00000026377.13	novel	1889	7	NA	NA	19	0	intron_retention	FALSE	canonical	3	402	junction_5	23.0182536261985	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGGACTTTTTTTAA	NA	False	NA	6	True	NA	NA	NA	118249602	118261552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ES.1170.7	chr1	+	868	1	NIC	ENSMUSG00000026377.13	novel	1889	7	NA	NA	10570	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAAGCTTCCTTTTTGTCC	NA	False	NA	23	True	AATATA	-17	NA	118260451	118261319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118260500_118261300
ES.11700.1	chr15	-	193	1	Intergenic	novelGene_9759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	34207897	34207704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34207700_34207900
ES.11701.1	chr15	+	1816	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	82	4	-39	3	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTCGTGGCTCCGCT	72	False	NA	NA	False	ATTAAA	-18	NA	34238255	34284444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ES.11701.2	chr15	+	3275	7	NNC	ENSMUSG00000022257.5	novel	1902	7	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	152.618260156946	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACAGTCGTGGCTCC	95	False	NA	NA	False	ATTAAA	-15	NA	34238278	34284441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277899_34282185
ES.11701.3	chr15	+	7352	7	NNC	ENSMUSG00000022257.5	novel	1902	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	152.618260156946	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	96	False	NA	NA	False	ATTAAA	-22	NA	34238279	34284448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34279454_34279669
ES.11701.4	chr15	+	159	1	Intergenic	novelGene_9760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	6009	False	NA	NA	False	NA	NA	NA	34244749	34244908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34244700_34244900
ES.11701.5	chr15	+	2412	3	ISM	ENSMUSG00000022257.5	ENSMUST00000226437.2	1662	6	36773	-7	1662	0	3prime_fragment	FALSE	canonical	3	401	junction_1	26.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	NA	False	NA	NA	False	ATTAAA	-22	NA	34275067	34284448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34276381_34277577_34277674_34283445
ES.11702.1	chr15	-	153	1	Intergenic	novelGene_9761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATT	8040	False	NA	NA	False	NA	NA	NA	34261822	34261669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34261700_34261800
ES.11703.1	chr15	-	183	1	Intergenic	novelGene_9762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	34295555	34295372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34295400_34295600
ES.11704.1	chr15	+	197	1	Intergenic	novelGene_9763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTATTAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	34305258	34305455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34305300_34305500
ES.11705.1	chr15	+	3580	19	FSM	ENSMUSG00000022324.16	ENSMUST00000227759.2	3569	19	-7	-4	1	4	multi-exon	FALSE	canonical	0	0	junction_1	1.0137937550497	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTGAGTAAAATTCCT	48	False	NA	NA	False	ATTAAA	-19	NA	34306823	34436388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ES.11705.2	chr15	+	4138	10	ISM	ENSMUSG00000022324.16	ENSMUST00000228570.2	2798	14	-7	16495	1	-16495	5prime_fragment	TRUE	canonical	0	0	junction_1	1.15470053837925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTTATGTCTGGTTG	48	False	NA	NA	False	AATAAA	-20	NA	34306823	34412693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259
ES.11705.3	chr15	+	3523	19	FSM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	-3	31	1	4	multi-exon	FALSE	canonical	0	0	junction_1	1.03040205505508	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTGAGTAAAATTCCT	48	False	NA	NA	False	ATTAAA	-19	NA	34306823	34436388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235_34433314_34433632_34433732_34435877
ES.11705.4	chr15	+	3248	3	FSM	ENSMUSG00000022324.16	ENSMUST00000226766.2	3252	3	-1	5	-1	-5	multi-exon	FALSE	canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAACCCTCTTGTCAGCTT	49	False	NA	NA	False	ATTAAA	-17	NA	34306824	34347989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34307055_34316636_34316802_34345136
ES.11705.5	chr15	+	177	1	Intergenic	novelGene_9765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	34431217	34431394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34431200_34431400
ES.11706.1	chr15	-	177	1	Intergenic	novelGene_9764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGTATAAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	34368625	34368448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34368400_34368600
ES.11707.1	chr15	+	1071	1	Intergenic	novelGene_9766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2314	False	NA	NA	False	NA	NA	NA	34436504	34437575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34436500_34437600
ES.11708.1	chr15	-	3785	1	FSM	ENSMUSG00000065899.3	ENSMUST00000083965.3	132	1	-2300	-1353	-2300	1353	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCACAAAACAAACAAAAAA	361	False	NA	NA	False	NA	NA	NA	34443368	34439583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34439600_34443400
ES.11708.10	chr15	-	1746	4	NIC	ENSMUSG00000058600.14	novel	886	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	3551	junction_3	873.300381057718	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	350	False	NA	-25	True	AATAAA	-22	NA	34443379	34440655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34440751_34441377_34442927_34443170_34443224_34443330
ES.11708.12	chr15	-	2297	3	NIC	ENSMUSG00000058600.14	novel	886	5	NA	NA	100	0	intron_retention	FALSE	canonical	3	3551	junction_2	378	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	43	False	NA	-25	True	AATAAA	-22	NA	34443686	34440655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34440751_34441377_34443224_34443330
ES.11708.14	chr15	-	2581	2	Fusion	ENSMUSG00000065899.3_ENSMUSG00000058600.14	novel	388	3	NA	NA	-30	-11	intron_retention	FALSE	canonical	3	777	junction_1	0	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCTTTTGAAAAACATG	393	False	NA	-36	True	AATAAA	-11	NA	34443336	34440666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_34443224_34443312
ES.11708.2	chr15	-	993	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	-111	4	-111	1	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGTGTCTGTTTGC	NA	False	NA	-24	True	AATAAA	-23	NA	34443897	34440654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ES.11708.3	chr15	-	2569	1	FSM	ENSMUSG00000065899.3	ENSMUST00000083965.3	132	1	-2156	-281	-2156	281	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	-6	True	NA	-25	True	AATAAA	-22	NA	34443224	34440655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34440700_34443200
ES.11708.5	chr15	-	451	5	NNC	ENSMUSG00000058600.14	novel	570	4	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	391	False	NA	-25	True	AATAAA	-22	NA	34443338	34440655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
ES.11708.7	chr15	-	707	4	NIC	ENSMUSG00000058600.14	novel	570	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	3551	junction_3	649.375084215586	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	361	False	NA	-25	True	AATAAA	-22	NA	34443368	34440655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34440751_34441377_34441509_34442780_34443224_34443330
ES.11709.1	chr15	-	87	1	Intergenic	novelGene_9767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	34450743	34450656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34450700_34450700
ES.1171.1	chr1	-	5675	1	Antisense	novelGene_ENSMUSG00000026377.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCATCAGGATGCCAC	NA	False	NA	NA	False	NA	NA	NA	118260020	118254345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118254300_118260000
ES.1171.2	chr1	-	4593	2	Antisense	novelGene_ENSMUSG00000026377.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAACCAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	118260020	118254386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118257292_118258332
ES.11710.1	chr15	+	2820	1	Intergenic	novelGene_9768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTATTTGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	34476338	34479158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34476300_34479200
ES.11711.1	chr15	+	3336	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	-48	-13	-29	2	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTGTTTTTAATCTGA	46	False	NA	11	True	ATTAAA	-21	NA	34495420	34530796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ES.11711.3	chr15	+	4493	16	FSM	ENSMUSG00000084607.3_ENSMUSG00000115005.2_ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	-1	-1217	-1	31	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTCTTTACAGATAATT	93	False	NA	NA	False	ATTAAA	-24	NA	34495467	34532000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ES.11711.4	chr15	+	4666	15	Fusion	ENSMUSG00000084607.3_ENSMUSG00000115005.2_ENSMUSG00000022325.15	novel	3275	16	NA	NA	24	357	multi-exon	FALSE	canonical	0	0	junction_11	16.8542673092191	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCTTTTGTAATTAAA	118	False	NA	NA	False	NA	NA	NA	34495492	34532326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34513003_34517989_34518165_34526308_34526464_34529028_34529377_34530008
ES.11711.5	chr15	+	5771	12	NIC	ENSMUSG00000022325.15	novel	3275	16	NA	NA	-4849	-1	intron_retention	FALSE	canonical	3	42	junction_7	10.7118533248403	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGATTTGTTTTTAATC	8956	False	NA	8	True	ATTAAA	-18	NA	34505203	34530793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ES.11711.6	chr15	+	3945	3	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	28183	-10	-2639	-1	3prime_fragment	FALSE	canonical	3	55	junction_1	4	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGATTTGTTTTTAATC	NA	False	NA	8	True	ATTAAA	-18	NA	34523651	34530793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34526464_34529028_34529377_34530008
ES.11711.7	chr15	+	6209	1	NIC	ENSMUSG00000022325.15	novel	3395	17	NA	NA	-1708	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATGATTTGTTTTTAA	NA	False	NA	6	True	ATTAAA	-16	NA	34524582	34530791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_34524600_34530800
ES.11711.8	chr15	+	2141	3	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	30876	-899	54	888	3prime_fragment	FALSE	canonical	3	55	junction_1	4	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTGTCTGGTTGATC	NA	False	NA	NA	False	NA	NA	NA	34526344	34531682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_34526464_34529028_34529377_34530008
ES.11712.1	chr15	-	2396	7	NNC	ENSMUSG00000022323.12	novel	1004	6	NA	NA	-476	1071	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.064968374693	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTACCTTGGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	34495877	34483095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34484682_34485745_34485802_34486756_34486826_34487505_34487687_34487887_34487943_34488719_34488826_34495534
ES.11712.2	chr15	-	2801	4	NIC	ENSMUSG00000022323.12	novel	1004	6	NA	NA	-32	10	intron_retention	FALSE	canonical	3	279	junction_2	9.80929264637477	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTCTCTTATTTTT	NA	False	NA	0	True	AATAAA	-31	NA	34495349	34484156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34484682_34485745_34485802_34486756_34488826_34495198
ES.11712.3	chr15	-	994	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	9	1	9	-1	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	False	NA	-11	True	AATAAA	-20	NA	34495392	34484167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
ES.11712.4	chr15	-	3699	3	ISM	ENSMUSG00000022323.12	ENSMUST00000129426.2	337	5	-58	-1575	56	-5	intron_retention	FALSE	canonical	3	279	junction_1	0.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCCCTTGGTTTTTAA	5338	False	NA	-18	True	AATAAA	-13	NA	34489890	34484174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_34485802_34486756_34486826_34487887
ES.11712.5	chr15	-	5893	2	ISM	ENSMUSG00000022323.12	ENSMUST00000125286.8	2986	4	-1183	5	-1183	-5	intron_retention	FALSE	canonical	3	280	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCCCTTGGTTTTTAA	4099	False	NA	-18	True	AATAAA	-13	NA	34491129	34484174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_34486826_34487887
ES.11712.6	chr15	-	1750	5	NIC	ENSMUSG00000022323.12	novel	1004	6	NA	NA	22	-6	intron_retention	FALSE	canonical	3	279	junction_2	9.81070843517429	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCCTTGGTTTTTA	NA	False	NA	-19	True	AATAAA	-12	NA	34495379	34484175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34488826_34495198
ES.11713.1	chr15	-	2984	1	Intergenic	novelGene_9769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGGGGCCCACG	NA	False	NA	NA	False	NA	NA	NA	34499359	34496375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34496400_34499400
ES.11713.2	chr15	-	2597	3	Antisense	novelGene_ENSMUSG00000022325.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCAGGTGTGGGTGC	NA	False	NA	NA	False	NA	NA	NA	34509950	34499204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_34499316_34506012_34506811_34508262
ES.11714.1	chr15	-	1903	12	NNC	ENSMUSG00000038879.9	novel	4331	11	NA	NA	3	587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.49734255666752	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTTTACAGGGGTGTT	7	True	NA	NA	False	AATAAA	-16	NA	34678877	34575064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34609318_34609441_34624492_34624666_34625117_34625178_34648811_34648984_34650527_34650597_34678704
ES.11714.2	chr15	-	1205	7	NNC	ENSMUSG00000038879.9	novel	4331	11	NA	NA	-18035	584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.97562014729219	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGAGTTTACAGGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	34600952	34575067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34600878
ES.11714.3	chr15	-	1544	9	NIC	ENSMUSG00000038879.9	novel	4331	11	NA	NA	4	584	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3.46410161513775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGAGTTTACAGGGGT	8	True	NA	NA	False	AATAAA	-13	NA	34678876	34575067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34648811_34648984_34650527_34650597_34678704
ES.11714.4	chr15	-	1750	11	FSM	ENSMUSG00000038879.9	ENSMUST00000040791.9	4331	11	458	2123	-11	584	multi-exon	FALSE	canonical	2	3	junction_3	2.40831891575846	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGAGTTTACAGGGGT	291	False	NA	NA	False	AATAAA	-13	NA	34678900	34575067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34575718_34577715_34577811_34578853_34578918_34582866_34582956_34584775_34584912_34600160_34600258_34609318_34609441_34625117_34625178_34648811_34648984_34650527_34650597_34678704
ES.11714.5	chr15	-	6967	5	FSM	ENSMUSG00000038879.9	ENSMUST00000227336.2	3243	5	18	-3742	-12	3742	multi-exon	FALSE	canonical	0	0	junction_1	3.11247489949718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAACATGAAGGGTAGAA	329	False	NA	NA	False	AAGAAA	-4	NA	34678862	34618157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34624666_34625117_34625178_34648811_34648984_34650527_34650597_34678704
ES.11715.1	chr15	-	2785	1	Intergenic	novelGene_9770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTTGTTTCAGATAT	NA	False	NA	NA	False	NA	NA	NA	34747903	34745118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_34745100_34747900
ES.11716.1	chr15	+	5174	2	FSM	ENSMUSG00000050963.8	ENSMUST00000072868.5	5456	2	142	140	142	42	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGGCTCCTGCGCCATT	223	False	NA	NA	False	NA	NA	NA	34837642	34843413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34837999_34838595
ES.11716.2	chr15	+	5280	2	FSM	ENSMUSG00000050963.8	ENSMUST00000072868.5	5456	2	165	11	165	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCACTTCCCTAAGGTC	246	False	NA	NA	False	ATTAAA	-12	NA	34837665	34843542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_34837999_34838595
ES.11717.1	chr15	+	2927	1	Intergenic	novelGene_9771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGCAGTGGTGGCGCAT	NA	False	NA	NA	False	NA	NA	NA	34992525	34995452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_34992500_34995500
ES.11718.1	chr15	+	179	1	Intergenic	novelGene_9772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35091044	35091223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35091000_35091200
ES.11719.1	chr15	-	2849	12	NNC	ENSMUSG00000022329.16	novel	2914	11	NA	NA	22	7633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.002066089023	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCAAAGGCTGTCCAAC	NA	False	NA	NA	False	NA	NA	NA	35155874	34868008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34868021_34875640_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.10	chr15	-	2687	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	67	160	11	17	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATTTCTGCAGAGCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	35155885	34875801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.11	chr15	-	2268	11	NNC	ENSMUSG00000022329.16	novel	773	7	NA	NA	0	21227	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	83.468796564944	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTCTTAAGCAAGTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	35155952	34935862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34936542_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.12	chr15	-	2550	11	NNC	ENSMUSG00000022329.16	novel	773	7	NA	NA	3	21227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.468796564944	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTCTTAAGCAAGTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	35155893	34935862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34936883_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.13	chr15	-	4166	11	NNC	ENSMUSG00000022329.16	novel	773	7	NA	NA	-12	21197	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.468796564944	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35155964	34935892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34938118_34944811_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.14	chr15	-	4931	1	Intergenic	novelGene_9773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGATTGCTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	35112258	35107327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_35107300_35112300
ES.11719.2	chr15	-	2954	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	-40	0	-40	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35155992	34875641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ES.11719.5	chr15	-	1867	5	NIC	ENSMUSG00000022329.16	novel	2471	9	NA	NA	-72613	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	105.81912634302	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGCGTTGTTGTTA	NA	False	NA	-2	True	AATAAA	-17	NA	35072681	34875645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34876967_34945151_34945328_34999976_35000103_35008306_35008445_35072575
ES.11719.6	chr15	-	3018	12	NNC	ENSMUSG00000022329.16	novel	2914	11	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	94.473749032196	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGCGTTGTTGTTA	NA	False	NA	-2	True	AATAAA	-17	NA	35155865	34875645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35104371_35104567_35114674_35114804_35115710_35115792_35155672
ES.11719.8	chr15	-	2816	11	NNC	ENSMUSG00000022329.16	novel	2914	11	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	98.5291834940288	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAACTTGGCGTTGTTGT	NA	False	NA	-4	True	AATAAA	-15	NA	35155926	34875647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35088533_35088583_35114674_35114804_35115710_35115792_35155672
ES.11719.9	chr15	-	8461	1	NIC	ENSMUSG00000022329.16	novel	2914	11	NA	NA	76275	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAACTTGGCGTTGTTGT	NA	False	NA	-4	True	AATAAA	-15	NA	34884108	34875647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_34875600_34884100
ES.1172.1	chr1	+	171	1	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	118278069	118278240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_118278100_118278200
ES.11720.1	chr15	-	180	1	Intergenic	novelGene_9774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAACAAACACCA	NA	False	NA	NA	False	NA	NA	NA	35281739	35281559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_35281600_35281700
ES.11721.1	chr15	+	1831	5	NNC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-2543	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9374020373769	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGAGATTCATCTT	NA	False	NA	14	True	AATAAA	-17	NA	35293700	35303452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35294039_35296475_35296614_35300334_35301102_35302057_35302158_35302964
ES.11721.2	chr15	+	998	3	FSM	ENSMUSG00000022330.6	ENSMUST00000228684.2	579	3	-53	-366	-40	1	multi-exon	FALSE	canonical	2	8	junction_1	9.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGAGATTCATCTT	77	False	NA	14	True	AATAAA	-17	NA	35296203	35303452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_35296614_35302057_35302158_35302964
ES.11721.3	chr15	+	1816	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCTTGAGATTCATC	106	False	NA	12	True	AATAAA	-15	NA	35296232	35303450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
ES.11721.4	chr15	+	1550	4	NNC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6468827043885	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCTTGCTAGCCAATC	117	False	NA	25	True	AATAAA	-28	NA	35296243	35303463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35296614_35300520_35301102_35302057_35302158_35302964
ES.11721.5	chr15	+	2027	5	NNC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.0062490237426	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCTTGAGATTCATC	119	False	NA	12	True	AATAAA	-15	NA	35296245	35303450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35296614_35300334_35301102_35301322_35301547_35302057_35302158_35302882
ES.11721.6	chr15	+	1039	3	NIC	ENSMUSG00000022330.6	novel	2761	3	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGAGATTCATCTTG	119	False	NA	15	True	AATAAA	-18	NA	35296245	35303453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35296614_35302057_35302158_35302882
ES.11721.7	chr15	+	1688	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	35	1	22	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCTTGAGATTCATC	152	False	NA	12	True	AATAAA	-15	NA	35296278	35303450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
ES.11722.1	chr15	-	178	1	Intergenic	novelGene_9775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35363510	35363332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_35363300_35363500
ES.11723.1	chr15	+	7865	40	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-37	-48994	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	15.6611472085194	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	12	False	NA	15	True	AATAAA	-16	NA	35371268	35794686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35518715_35518803_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.10	chr15	+	3266	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-31	-99810	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	15.8355468151968	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTCAGGGTTAAAATTC	95	False	NA	NA	False	NA	NA	NA	35371640	35543288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35543154
ES.11723.11	chr15	+	7366	39	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-30	-48994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.2979038813968	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	96	False	NA	15	True	AATAAA	-16	NA	35371641	35794686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422586_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.12	chr15	+	4807	29	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-2	3327	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	12.9671386077835	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATACGCTGACTTCACGC	124	False	NA	NA	False	AAGAAA	-24	NA	35371669	35646425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118
ES.11723.13	chr15	+	4879	1	NIC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	1	4307	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	127	False	NA	NA	False	NA	NA	NA	35371672	35376551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35371700_35376600
ES.11723.14	chr15	+	5746	34	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	6	32878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	14.5833471074315	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTGTGAAAAGTTGTG	132	False	NA	NA	False	TTTAAA	-14	NA	35371677	35675976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35675721
ES.11723.15	chr15	+	8889	21	ISM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	-34	60890	6	-60890	5prime_fragment	FALSE	canonical	3	43	junction_20	9.76422039898732	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCATGTGGGACTCAA	132	False	NA	NA	False	NA	NA	NA	35371677	35582208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524
ES.11723.16	chr15	+	3701	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-8	-72498	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.751324976269	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTCTTAAATTAAATAAAAA	138	False	NA	NA	False	AATAAA	-18	NA	35371683	35570600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430418_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
ES.11723.17	chr15	+	4273	23	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-6	-42168	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	15.0922781416237	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTTTATGGAAAATTG	140	False	NA	NA	False	AATAAA	-12	NA	35371685	35600930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35600130
ES.11723.18	chr15	+	4774	22	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-5	-44010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.6483145937698	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAAGTCTACAGTGAAT	141	False	NA	NA	False	AATAAA	-19	NA	35371686	35599088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371845_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422586_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540
ES.11723.19	chr15	+	5010	19	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-1	37603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	20.6652478604976	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACAATTCCCTTATGGC	148	False	NA	NA	False	NA	NA	NA	35371693	35477220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35474864_35475494_35475609
ES.11723.2	chr15	+	8558	23	ISM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	-441	31153	-35	-31153	5prime_fragment	FALSE	canonical	3	42	junction_21	10.030531902543	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTTTCTATTTT	14	False	NA	NA	False	TATAAA	-21	NA	35371270	35611945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275
ES.11723.20	chr15	+	6642	35	NIC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	2	-49001	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.1335157777985	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATGCTTGGAACATA	151	False	NA	8	True	AATAAA	-9	NA	35371696	35794679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35371845_35372078_35372254_35379034_35379179_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.21	chr15	+	5987	28	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	2	1026	intron_retention	FALSE	canonical	3	22	junction_20	12.4692213662875	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAACTAATACTTTTTTC	151	False	NA	NA	False	AATAAA	-20	NA	35371696	35644124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543
ES.11723.22	chr15	+	8269	37	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	3	-49836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	13.5592834127275	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTATAATTTATTATCA	152	False	NA	NA	False	NA	NA	NA	35371697	35793844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448771_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184
ES.11723.23	chr15	+	4686	2	ISM	ENSMUSG00000037646.11	ENSMUST00000227309.2	1539	5	16	43749	-4	4304	5prime_fragment	FALSE	canonical	3	68	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCAAAAAAAAAAAAAAAGA	162	False	NA	NA	False	NA	NA	NA	35371707	35376548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078
ES.11723.24	chr15	+	7421	40	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	2	-48997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.8698266215582	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTGGAACATACTTT	168	False	NA	12	True	AATAAA	-13	NA	35371713	35794683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35491273_35491364_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576677_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.25	chr15	+	8248	37	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	409	137631	3	-49936	5prime_fragment	FALSE	canonical	3	30	junction_28	11.3219918742243	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTCAAATTTGTTGTT	169	False	NA	NA	False	AATGAA	-45	NA	35371714	35793744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184
ES.11723.26	chr15	+	3831	21	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	7	-72469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	19.7888857695425	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCATTTGTCTTCTGA	173	False	NA	NA	False	AATAAA	-12	NA	35371718	35570629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35553235_35553359_35569975
ES.11723.27	chr15	+	13135	63	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_56	14.7561870831204	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCGTGGATAAAGGTGT	177	False	NA	NA	False	AATAAA	-17	NA	35371722	35931364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35910332_35910396_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926308_35930000
ES.11723.28	chr15	+	6141	23	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	31	-40240	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	16.3891846014628	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTAAAAATCATCATTTA	197	False	NA	NA	False	AATAAA	-20	NA	35371742	35602858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35600130
ES.11723.3	chr15	+	7773	39	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-35	-48994	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	11.9311564014052	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	14	False	NA	15	True	AATAAA	-16	NA	35371270	35794686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.30	chr15	+	4607	2	Intergenic	novelGene_9776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGCAGATAGCCTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	35389667	35402014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35391261_35399000
ES.11723.31	chr15	+	11809	53	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	74470	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	11.5675754492957	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGGTGTGCTGTGAGT	NA	False	NA	NA	False	AATAAA	-26	NA	35446181	35931373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.32	chr15	+	7515	23	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	77006	-69348	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	16.1306648067412	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35448717	35774332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771161_35771205
ES.11723.33	chr15	+	11305	50	NNC	ENSMUSG00000037646.11	novel	2634	3	NA	NA	78946	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7070335028267	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGGTGTGCTGTGAGT	NA	False	NA	NA	False	AATAAA	-26	NA	35450657	35931373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35450694_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.34	chr15	+	5557	26	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	83409	-43672	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	11.7081851710673	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	35455120	35800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35799467
ES.11723.35	chr15	+	3490	12	NIC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	85057	1684	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.4578595338642	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTTTTATGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	35456768	35644782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35456886_35472028_35472211_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35642991
ES.11723.36	chr15	+	177	1	Intergenic	novelGene_9777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTGTACATC	5055	False	NA	NA	False	NA	NA	NA	35506964	35507141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35507000_35507100
ES.11723.37	chr15	+	4577	22	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	161729	-48998	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	8.98751969144333	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTTGGAACATACTT	1976	False	NA	11	True	AATAAA	-12	NA	35533440	35794682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
ES.11723.38	chr15	+	1337	7	ISM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	161784	24894	161784	-24894	internal_fragment	FALSE	canonical	3	42	junction_4	6.41396046829795	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTGAGGAACTATTTC	2031	False	NA	NA	False	AATAAA	-25	NA	35533495	35618204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743
ES.11723.39	chr15	+	179	1	Intergenic	novelGene_9778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATATATTCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	35543102	35543281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35543100_35543300
ES.11723.4	chr15	+	4155	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-27	-72462	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	14.5875900659951	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTTCTGATGTAATG	22	False	NA	NA	False	AATAAA	-19	NA	35371278	35570636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
ES.11723.40	chr15	+	2636	12	NIC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	-193677	-48998	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	14.5965013355828	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTTGGAACATACTT	NA	False	NA	11	True	AATAAA	-12	NA	35640683	35794682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35792184_35792388_35793979_35794185_35794450
ES.11723.41	chr15	+	2076	1	Intergenic	novelGene_9779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGAAGCAGACAATAGC	NA	False	NA	NA	False	AAGAAA	-2	NA	35643304	35645380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35643300_35645400
ES.11723.42	chr15	+	3293	1	Intergenic	novelGene_9781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTCAATTACATC	NA	False	NA	NA	False	ATTAAA	-15	NA	35723386	35726679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35723400_35726700
ES.11723.43	chr15	+	181	1	Intergenic	novelGene_9782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATAAGTTGG	NA	False	NA	NA	False	NA	NA	NA	35730529	35730710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_35730500_35730700
ES.11723.44	chr15	+	3860	18	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	504423	1139	3861	-1139	3prime_fragment	FALSE	canonical	3	24	junction_2	6.32510240353664	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCTGAGTCCCCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35875728	35930236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.47	chr15	+	3935	12	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	511727	1	11165	-1	3prime_fragment	FALSE	canonical	3	31	junction_4	5.64808166073057	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGTGCTGTGAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	35883032	35931374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.48	chr15	+	2247	6	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	543610	10	43048	-10	3prime_fragment	FALSE	canonical	3	41	junction_1	3.63318042491699	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGTGGATAAAGGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	35914915	35931365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.49	chr15	+	3757	5	ISM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	544204	2	43642	-2	3prime_fragment	FALSE	canonical	3	42	junction_2	3.69966214673719	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGGTGTGCTGTGAGT	NA	False	NA	NA	False	AATAAA	-26	NA	35915509	35931373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11723.5	chr15	+	3586	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	-27	-73031	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	14.5875900659951	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAAGCCTTTG	22	False	NA	NA	False	NA	NA	NA	35371278	35570067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
ES.11723.50	chr15	+	5414	1	Genic_Genomic	ENSMUSG00000037646.11	novel	NA	NA	NA	NA	55182	1088	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGCCAATTCTTG	NA	False	NA	NA	False	NA	NA	NA	35927049	35932463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_35927000_35932500
ES.11723.6	chr15	+	3768	21	ISM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	-249	66226	157	-66226	5prime_fragment	FALSE	canonical	3	43	junction_20	9.76422039898732	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTATTGTTGCATGCTG	85	False	NA	NA	False	AATAAA	-25	NA	35371462	35576872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524
ES.11723.7	chr15	+	5133	27	ISM	ENSMUSG00000037646.11	ENSMUST00000226579.2	4568	29	-225	1794	181	-1794	5prime_fragment	FALSE	canonical	3	32	junction_24	10.7282186105715	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGATTTATAGTATAA	109	False	NA	NA	False	AATAAA	-17	NA	35371486	35641304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675
ES.11723.8	chr15	+	13580	62	FSM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	181	-4	181	4	multi-exon	TRUE	canonical	3	23	junction_44	12.5602231076886	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTGTGAGTTTTTTC	109	False	NA	NA	False	AATAAA	-32	NA	35371486	35931379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ES.11724.1	chr15	-	1651	1	Intergenic	novelGene_9780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCCTTA	NA	False	NA	NA	False	AATACA	-23	NA	35655633	35653982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_35654000_35655600
ES.11725.1	chr15	-	3902	1	Intergenic	novelGene_9783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCTGCTTTTGGGC	NA	False	NA	NA	False	AATAAA	-29	NA	35867814	35863912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_35863900_35867800
ES.11726.1	chr15	-	4670	1	Antisense	novelGene_ENSMUSG00000037646.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCATGCCCATTAATTAT	NA	False	NA	NA	False	NA	NA	NA	35874313	35869643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_35869600_35874300
ES.11726.2	chr15	-	2417	1	Antisense	novelGene_ENSMUSG00000037646.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCATTGTGGATGTTCC	NA	False	NA	NA	False	NA	NA	NA	35874313	35871896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_35871900_35874300
ES.11727.1	chr15	-	1286	1	Antisense	novelGene_ENSMUSG00000037646.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6889	False	NA	NA	False	NA	NA	NA	35906302	35905016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_35905000_35906300
ES.11728.1	chr15	-	462	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	39	2	0	-2	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGCTTGGTTATTA	NA	False	NA	-3	True	AATAAA	-20	NA	35938353	35932123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ES.11728.5	chr15	-	676	4	FSM	ENSMUSG00000014313.16	ENSMUST00000156915.3	606	4	-48	-22	-48	-2	multi-exon	FALSE	canonical	3	405	junction_3	4177.00884472237	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGCTTGGTTATTA	-9	False	NA	-3	True	AATAAA	-20	NA	35938203	35932123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35937906
ES.11728.6	chr15	-	3023	2	FSM	ENSMUSG00000014313.16	ENSMUST00000127999.2	3038	2	20	-5	20	-2	multi-exon	FALSE	canonical	3	8821	junction_1	0	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGCTTGGTTATTA	NA	False	NA	-3	True	AATAAA	-20	NA	35938333	35932123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_35932244_35935430
ES.11728.7	chr15	-	2862	3	NIC	ENSMUSG00000014313.16	novel	738	3	NA	NA	64	1	intron_retention	FALSE	canonical	3	46	junction_2	4387.5	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTTGCTTGGTTATT	NA	False	NA	-4	True	AATAAA	-19	NA	35938289	35932124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_35932244_35935430_35937185_35937300
ES.11728.8	chr15	-	476	5	NNC	ENSMUSG00000014313.16	novel	503	4	NA	NA	62	-1	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	4245.4612823579	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTCTTTGCTTGGTTA	NA	False	NA	-6	True	AATAAA	-17	NA	35938291	35932126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_35932244_35935430_35935560_35937105_35937185_35937300_35937431_35938270
ES.11728.9	chr15	-	2163	3	NIC	ENSMUSG00000014313.16	novel	503	4	NA	NA	37	-1	intron_retention	FALSE	canonical	3	8539	junction_2	141	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTCTTTGCTTGGTTA	NA	False	NA	-6	True	AATAAA	-17	NA	35938316	35932126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_35932244_35935430_35937431_35938270
ES.11729.1	chr15	+	3726	1	Antisense	novelGene_ENSMUSG00000037627.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAGTATTAACAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	36078035	36081761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36078000_36081800
ES.1173.1	chr1	+	5312	2	NNC	ENSMUSG00000099936.2	novel	2166	3	NA	NA	-5	1770	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGATGTTTTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	118285036	118292949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118287732_118290332
ES.11730.1	chr15	+	4703	1	Antisense	novelGene_ENSMUSG00000037627.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTCTCGCCACTGTG	NA	False	NA	NA	False	AAGAAA	-31	NA	36135294	36139997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36135300_36140000
ES.11731.1	chr15	-	5921	28	NNC	ENSMUSG00000037627.17	novel	4006	28	NA	NA	5	1061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.91162783712058	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTCCTTTATTTATGC	NA	False	NA	NA	False	NA	NA	NA	36140526	36008563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36009761_36010433_36010484_36010686_36010774_36010887_36010982_36013223_36013320_36015759_36015916_36025953_36026134_36040698_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092033_36093145_36098360_36098461_36099748_36100362_36101872_36102003_36103865_36104035_36104633_36104720_36107045_36107268_36122415_36122479_36140024_36140054_36140473
ES.11731.2	chr15	-	3369	4	NIC	ENSMUSG00000037627.17	novel	4006	28	NA	NA	26325	1052	intron_retention	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAATGTTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	36014500	36008572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36010484_36010686_36010774_36010887_36010982_36013223
ES.11731.3	chr15	-	2063	1	Intergenic	novelGene_9784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAATGAGAGACCTAT	4512	False	NA	NA	False	TTTAAA	-5	NA	36073058	36070995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_36071000_36073100
ES.11731.4	chr15	-	4018	15	NNC	ENSMUSG00000037627.17	novel	1745	2	NA	NA	-52	-30233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.81967702897957	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATAAGTATTGTATG	NA	False	NA	NA	False	TATAAA	-16	NA	36140598	36079253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36080716_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102311_36103865_36104035_36104633_36104720_36107045_36107268_36122415_36122479_36140024_36140054_36140473
ES.11731.5	chr15	-	3715	15	NNC	ENSMUSG00000037627.17	novel	1745	2	NA	NA	-63	-30233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.94962058056517	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATAAGTATTGTATG	NA	False	NA	NA	False	TATAAA	-16	NA	36140609	36079253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36080716_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092975_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36103865_36104035_36104633_36104720_36107045_36107268_36122415_36122479_36140024_36140054_36140473
ES.11731.6	chr15	-	137	1	Intergenic	novelGene_9785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAAACAAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	36082387	36082250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_36082200_36082400
ES.11731.7	chr15	-	1832	8	NNC	ENSMUSG00000037627.17	novel	4006	28	NA	NA	5	38762	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.76126114370542	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATTTCATAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	36140541	36099604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36100362_36101872_36102311_36103865_36104035_36104633_36104720_36107045_36107268_36122415_36122479_36140024_36140054_36140473
ES.11732.1	chr15	+	184	1	Antisense	novelGene_ENSMUSG00000048230.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTTTCCTTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	36150374	36150558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36150400_36150600
ES.11733.1	chr15	+	4747	2	Antisense	novelGene_ENSMUSG00000048230.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	36156123	36164519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36158184_36161832
ES.11734.1	chr15	+	477	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	17	-5	-6	2	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATTCAATGTCTTGT	126	False	NA	NA	False	ATTAAA	-17	NA	36174172	36177158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ES.11734.2	chr15	+	604	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	-2	-1	-2	1	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	130	False	NA	NA	False	ATTAAA	-16	NA	36174176	36177157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ES.11734.3	chr15	+	2060	2	ISM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	37	-4	14	1	intron_retention	FALSE	canonical	3	810	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTATTCAATGTCTTG	146	False	NA	NA	False	ATTAAA	-16	NA	36174192	36177157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_36174228_36175132
ES.11734.4	chr15	+	2957	1	NIC	ENSMUSG00000045996.13	novel	601	4	NA	NA	21	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	153	False	NA	NA	False	ATTAAA	-15	NA	36174199	36177156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_36174200_36177200
ES.11734.5	chr15	+	406	4	NNC	ENSMUSG00000045996.13	novel	489	4	NA	NA	22	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	389.350170868789	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCAATATATGGCTTAA	154	False	NA	NA	False	TATAAA	-9	NA	36174200	36177083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36174228_36175132_36175203_36175529_36175623_36176867
ES.11734.6	chr15	+	657	4	NNC	ENSMUSG00000045996.13	novel	601	4	NA	NA	31	-68	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	331.644722892167	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAATATATGGCTTAATT	163	False	NA	NA	False	TATAAA	-11	NA	36174209	36177085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36174518_36175132_36175203_36175529_36175623_36176899
ES.11735.1	chr15	+	3502	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	121	False	NA	NA	False	AATAAA	-25	NA	36179452	36235767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.10	chr15	+	1940	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	14	434	14	-1	multi-exon	FALSE	canonical	3	39	junction_4	7	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTGGTGGCAGTTC	86	False	NA	NA	False	ATTAAA	-13	NA	36210621	36235322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.11	chr15	+	2214	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	18	156	18	-156	multi-exon	FALSE	canonical	3	39	junction_4	7	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAAATTCACCCTGCT	90	False	NA	NA	False	AATAAA	-7	NA	36210625	36235600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.12	chr15	+	6663	2	NIC	ENSMUSG00000037617.13	novel	3219	19	NA	NA	1750	0	intron_retention	FALSE	canonical	3	55	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGGTGGCAGTTCT	2346	False	NA	NA	False	ATTAAA	-14	NA	36228563	36235323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_36234816_36234912
ES.11735.2	chr15	+	3352	18	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-55	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.7090267427491	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATGCCTGCGTGTCTG	127	False	NA	NA	False	AATAAA	-22	NA	36179458	36235764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36234446_36234816_36234912
ES.11735.3	chr15	+	6919	16	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-46	-8	intron_retention	TRUE	non_canonical	0	0	junction_2	22.0770368382071	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACATTCTTTGTGGTG	136	False	NA	NA	False	ATTAAA	-6	NA	36179467	36235315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36179524_36181841_36181990_36186752_36189971_36190093_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.4	chr15	+	3310	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	-30	-150	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCACCCTGCTTTTGTA	152	False	NA	NA	False	AATAAA	-13	NA	36179483	36235606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.5	chr15	+	3227	19	FSM	ENSMUSG00000037617.13	ENSMUST00000047348.11	3646	19	-28	447	-28	-3	multi-exon	FALSE	canonical	2	3	junction_1	18.7185950987016	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTTTGTGGTGGCAGT	154	False	NA	NA	False	ATTAAA	-11	NA	36179485	36235320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36179729_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.7	chr15	+	3628	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.7537306993694	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGTGAGTATGCCTG	186	False	NA	NA	False	AATAAA	-14	NA	36179517	36235756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36179729_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200350_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11735.9	chr15	+	2426	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	-25	-13	-25	2	multi-exon	FALSE	canonical	3	39	junction_4	7	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCGTGTCTGTATGT	47	False	NA	NA	False	AATAAA	-27	NA	36210582	36235769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ES.11736.1	chr15	-	4395	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-19	-99	-19	99	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGAAAAGGAGATTTGT	NA	False	NA	NA	False	NA	NA	NA	36283312	36239979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.11	chr15	-	3903	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-22	396	-22	22	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTTCCTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	36283315	36240474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.12	chr15	-	2994	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-12	1295	-12	-877	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTTCATGTTGAT	NA	False	NA	NA	False	AATACA	-19	NA	36283305	36241373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.13	chr15	-	2861	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-18	1434	-18	-1016	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAATGCTGCAGAGTAA	NA	False	NA	NA	False	NA	NA	NA	36283311	36241512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.14	chr15	-	3955	6	NNC	ENSMUSG00000022280.10	novel	1136	2	NA	NA	-12	-10140	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.2375620599108	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACCAACATTACTTTT	NA	False	NA	NA	False	AATACA	-20	NA	36283305	36250636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36253022_36253097_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.15	chr15	-	3138	6	NNC	ENSMUSG00000022280.10	novel	1136	2	NA	NA	1	-10946	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.2375620599108	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGAGGGAAAGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	36283292	36251442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36253024_36253097_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.16	chr15	-	4353	5	NNC	ENSMUSG00000022280.10	novel	1136	2	NA	NA	3	-10946	intron_retention	FALSE	non_canonical	0	0	junction_1	77.0466579417952	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGAGGGAAAGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	36283290	36251442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36253022_36253097_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.18	chr15	-	3123	6	NNC	ENSMUSG00000022280.10	novel	1136	2	NA	NA	-11	-10962	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.8937423172909	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	36283304	36251458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36253023_36253097_36253310_36254528_36254674_36260160_36260364_36265425_36266178_36283057
ES.11736.2	chr15	-	5472	9	NIC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	148	junction_5	14.2631518255959	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	False	NA	1	True	AATAAA	-17	NA	36283303	36240078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36242212_36244232_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.20	chr15	-	3698	4	NNC	ENSMUSG00000022280.10	novel	1136	2	NA	NA	1	8056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.021070245468	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACCTGGATTGAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	36283292	36257208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36259707_36260160_36260370_36265421_36266178_36283057
ES.11736.21	chr15	-	1160	2	FSM	ENSMUSG00000022280.10	ENSMUST00000227735.2	1136	2	-24	0	-11	0	multi-exon	FALSE	canonical	3	197	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTTTTTATATTGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	36283304	36265264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36266178_36283057
ES.11736.22	chr15	-	2522	1	NIC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	5	-15502	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTGTTAGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	36283288	36280766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36280800_36283300
ES.11736.3	chr15	-	4064	9	NIC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	57.5043476617203	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGTGTGCCCAGGAA	NA	False	NA	0	True	AATAAA	-16	NA	36283295	36240079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36242212_36244232_36244377_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.5	chr15	-	4127	9	NIC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57.6107628833363	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGTGTGCCCAGGAA	NA	False	NA	0	True	AATAAA	-16	NA	36283288	36240079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36242212_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.6	chr15	-	4341	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	-66	2	-66	-2	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTGTGTGCCCAGGA	NA	False	NA	-1	True	AATAAA	-15	NA	36283359	36240080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11736.7	chr15	-	4277	10	NNC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	51.7064363068618	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTGTGTGCCCAGGA	NA	False	NA	-1	True	AATAAA	-15	NA	36283302	36240080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283064
ES.11736.8	chr15	-	6954	8	NIC	ENSMUSG00000022280.10	novel	4277	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	148	junction_4	15.069905136275	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTGTGTGCCCAGGA	NA	False	NA	-1	True	AATAAA	-15	NA	36283295	36240080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36242212_36244232_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ES.11737.1	chr15	+	176	1	Intergenic	novelGene_9786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACCATAGTT	NA	False	NA	NA	False	NA	NA	NA	36459656	36459832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36459700_36459800
ES.11738.1	chr15	+	198	1	Intergenic	novelGene_9787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	36549106	36549304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36549100_36549300
ES.11739.1	chr15	-	2477	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	33	-1	2	1	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGGCCATTTTCTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	36496933	36477812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ES.11739.10	chr15	-	2397	20	Fusion	ENSMUSG00000013611.15_ENSMUSG00000048307.9	novel	2344	14	NA	NA	-30	248	multi-exon	FALSE	canonical	0	0	junction_2	54.0248224471234	242	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTACTGTTTCAGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	36555748	36495839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_36496140_36496872_36497059_36501795_36501915_36503419_36503729_36504410_36504451_36505567_36505620_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36531112_36531187_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36555592
ES.11739.11	chr15	-	1059	1	NIC	ENSMUSG00000048307.9	novel	4133	4	NA	NA	-22	244	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATTCTTACTGTTTCA	NA	False	NA	NA	False	AATAAA	-10	NA	36496902	36495843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36495800_36496900
ES.11739.12	chr15	-	2482	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4590	12	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	7.66418918858136	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTTGCTAGTGAAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	36560308	36504545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
ES.11739.13	chr15	-	2360	14	FSM	ENSMUSG00000013611.15	ENSMUST00000161202.8	2344	14	-9	-7	-4	7	multi-exon	FALSE	canonical	2	5	junction_13	9.09385643454255	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGAGTTTGCTAGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	36555722	36504550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36505620_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36555592
ES.11739.14	chr15	-	2132	14	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4583	-234	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6.43492688565058	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAATTTGAATATTTTTC	NA	False	NA	NA	False	NA	NA	NA	36560301	36504791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36560155
ES.11739.15	chr15	-	2240	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4574	-248	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	8.31399115825798	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATAATCATCTCGCCAA	NA	False	NA	NA	False	NA	NA	NA	36560292	36504805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547075_36555404_36555480_36556627_36556725_36560155
ES.11739.16	chr15	-	2192	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4560	-248	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	7.66418918858136	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATAATCATCTCGCCAA	NA	False	NA	NA	False	NA	NA	NA	36560278	36504805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
ES.11739.18	chr15	-	1230	10	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4576	12113	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	6.05122169075116	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	36560294	36525540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36560155
ES.11739.3	chr15	-	4117	4	FSM	ENSMUSG00000048307.9	ENSMUST00000228630.2	4133	4	16	0	16	0	multi-exon	FALSE	canonical	3	250	junction_3	41.0960933531265	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496919	36477813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36479620_36484126_36486274_36496022_36496140_36496872
ES.11739.4	chr15	-	2811	5	NIC	ENSMUSG00000048307.9	novel	2509	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	132.872824535343	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496881	36477813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496485
ES.11739.6	chr15	-	2731	5	NIC	ENSMUSG00000048307.9	novel	2509	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	136.287150898388	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496885	36477813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496569
ES.11739.7	chr15	-	3263	2	NNC	ENSMUSG00000048307.9	novel	4133	4	NA	NA	11366	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTCATCGGCCATTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36485495	36477815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36480754_36485170
ES.11739.8	chr15	-	2003	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	44	462	13	-462	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGGCTAACGGTTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	36496922	36478275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ES.11739.9	chr15	-	2635	1	NIC	ENSMUSG00000048307.9	novel	4133	4	NA	NA	-16	1826	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAATTGGTCTCTGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	36496896	36494261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36494300_36496900
ES.1174.1	chr1	-	153	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	118289010	118288857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118288900_118289000
ES.11740.1	chr15	+	586	2	Intergenic	novelGene_9788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTAGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	36560542	36566201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36560637_36565709
ES.11740.2	chr15	+	752	2	Intergenic	novelGene_9789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTATAGACTTATTGC	NA	False	NA	NA	False	NA	NA	NA	36560542	36566367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36560637_36565709
ES.11740.3	chr15	+	305	2	Intergenic	novelGene_9790	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCTTGGTACACAGGA	NA	False	NA	NA	False	AATATA	-20	NA	36560553	36565931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36560637_36565709
ES.11741.1	chr15	-	2475	1	Intergenic	novelGene_9791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36570486	36568011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_36568000_36570500
ES.11742.1	chr15	+	4584	3	Antisense	novelGene_ENSMUSG00000022283.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCCTGGGGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	36599512	36604584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36600932_36601112_36601251_36601557
ES.11743.1	chr15	-	6094	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	3751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1528.4851702112	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGTGTATAAACTTG	377	False	NA	NA	False	AATATA	-17	NA	36609217	36592153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36592875_36593348_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.10	chr15	-	2804	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1570.89362485569	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	378	False	NA	-6	True	AATAAA	-17	NA	36609216	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599461_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.100	chr15	-	5762	12	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-57	intron_retention	FALSE	canonical	3	5069	junction_8	570.238908899718	3683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACCGAGCAAATGCCA	378	False	NA	NA	False	AATAAA	-29	NA	36609216	36596207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36605802_36605987_36606182_36608557
ES.11743.104	chr15	-	2514	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	17	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	1540.43655354909	3681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATATAAAATAAATAAAA	378	False	NA	NA	False	TTTAAA	-22	NA	36609216	36596250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.106	chr15	-	2657	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	17	intron_retention	FALSE	canonical	3	5069	junction_10	527.187479985303	3681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATATAAAATAAATAAAA	377	False	NA	NA	False	TTTAAA	-22	NA	36609217	36596250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36606182_36608557
ES.11743.107	chr15	-	2412	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_15	1527.31249221922	3680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACATTGCAAAATA	377	False	NA	NA	False	AAGAAA	-35	NA	36609217	36596264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36608808_36608852
ES.11743.109	chr15	-	2541	14	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	739	0	-199	5prime_fragment	FALSE	canonical	3	5069	junction_9	535.453344394886	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGGAAGTTGGCTTTCAT	377	False	NA	NA	False	AGTAAA	-18	NA	36609217	36596643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.11	chr15	-	7197	9	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_3	1963.65717078491	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596900_36597207_36597786_36598216_36598557_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36605802_36605987_36606182_36608557
ES.11743.110	chr15	-	5495	1	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATCTCATTATGTTTTC	377	False	NA	NA	False	NA	NA	NA	36609217	36603722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36603700_36609200
ES.11743.111	chr15	-	3090	2	ISM	ENSMUSG00000022283.16	ENSMUST00000226496.2	780	3	700	-2249	5	-7	3prime_fragment	FALSE	canonical	3	5222	junction_1	0	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	382	False	NA	NA	False	NA	NA	NA	36609212	36603746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36606182_36608557
ES.11743.112	chr15	-	4335	1	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1053	-90	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3388	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATCTCATTACGTTTTC	1430	False	NA	NA	False	NA	NA	NA	36608164	36603829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36603800_36608200
ES.11743.113	chr15	-	2812	3	FSM	ENSMUSG00000022283.16	ENSMUST00000146327.2	2916	3	-15	119	-15	-119	multi-exon	FALSE	canonical	3	5117	junction_1	52.5	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	362	False	NA	NA	False	NA	NA	NA	36609232	36603858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36605802_36605987_36606182_36608557
ES.11743.114	chr15	-	2983	2	ISM	ENSMUSG00000022283.16	ENSMUST00000226496.2	780	3	695	-2137	0	-119	3prime_fragment	FALSE	canonical	3	5222	junction_1	0	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	377	False	NA	NA	False	NA	NA	NA	36609217	36603858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36606182_36608557
ES.11743.115	chr15	-	349	1	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	12964	0	-2873	mono-exon	FALSE	NA	NA	NA	NA	NA	3193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTCTGCGCTCGCCCCC	377	False	NA	NA	False	NA	NA	NA	36609217	36608868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36608900_36609200
ES.11743.116	chr15	-	133	1	ISM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	1	13179	1	-3088	mono-exon	FALSE	NA	NA	NA	NA	NA	3159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCGTCTCCCCCGCCGGA	378	False	NA	NA	False	NA	NA	NA	36609216	36609083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36609100_36609200
ES.11743.12	chr15	-	2862	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	1540.43655354909	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.15	chr15	-	2822	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1580.90175926557	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605679_36605802_36605987_36606182_36608557
ES.11743.17	chr15	-	3931	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	5069	junction_9	549.323338460614	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.18	chr15	-	2597	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2586.50753462399	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598355_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36602858_36602994_36603089_36603230_36605685_36605802_36605987_36606182_36608894
ES.11743.19	chr15	-	3176	9	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1014	0	intron_retention	FALSE	canonical	3	5069	junction_8	479.703489147202	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	8018	False	NA	-7	True	AATAAA	-16	NA	36601576	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558
ES.11743.2	chr15	-	3159	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	-342	0	342	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	377	False	NA	NA	False	AATAAA	-17	NA	36609217	36595562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.22	chr15	-	2814	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1582.11551895117	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599715_36600832_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.24	chr15	-	2696	14	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1574.38206906973	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596911_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.26	chr15	-	2782	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1570.99285517803	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600925_36601139_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.27	chr15	-	2771	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	5	junction_15	1527.31249221922	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36608808_36608852
ES.11743.28	chr15	-	2978	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	5069	junction_9	552.337250119728	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.29	chr15	-	2487	14	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1623.59540023635	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	379	False	NA	-7	True	AATAAA	-16	NA	36609215	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598502_36599630_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.33	chr15	-	6573	12	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	5069	junction_9	514.271738954809	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36606182_36608557
ES.11743.34	chr15	-	1460	9	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	-895	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2063.01811674062	3668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	8693	False	NA	-7	True	AATAAA	-16	NA	36600901	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597356_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836
ES.11743.36	chr15	-	2775	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1581.54728067814	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606141_36608557
ES.11743.39	chr15	-	2384	14	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1630.15395867816	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	380	False	NA	-7	True	AATAAA	-16	NA	36609214	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599491_36601216_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.4	chr15	-	3420	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	84	1	intron_retention	FALSE	canonical	0	0	junction_11	1581.86815415914	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	NA	False	NA	-6	True	AATAAA	-17	NA	36609828	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.44	chr15	-	2746	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1580.90175926557	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	380	False	NA	-7	True	AATAAA	-16	NA	36609214	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605753_36605802_36605987_36606182_36608557
ES.11743.45	chr15	-	2808	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1582.11551895117	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600844_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.46	chr15	-	2234	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2103.47019402293	3681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	780	False	NA	-7	True	AATAAA	-16	NA	36608814	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599551_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.47	chr15	-	2741	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	365	junction_15	1443.20817933134	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	NA	False	NA	-7	True	AATAAA	-16	NA	36609905	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36609015_36609778
ES.11743.49	chr15	-	3427	9	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	-246	0	intron_retention	FALSE	canonical	3	5069	junction_8	493.805882913519	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	6758	False	NA	-7	True	AATAAA	-16	NA	36602836	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558
ES.11743.5	chr15	-	6648	11	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	1	intron_retention	FALSE	canonical	3	5069	junction_8	521.705750399591	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	378	False	NA	-6	True	AATAAA	-17	NA	36609216	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36606182_36608557
ES.11743.50	chr15	-	2808	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	82	junction_7	1551.04099506343	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	380	False	NA	-7	True	AATAAA	-16	NA	36609214	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599281_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.52	chr15	-	2807	5	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	5911	junction_3	364.803628682611	3668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	9588	False	NA	-7	True	AATAAA	-16	NA	36600006	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36599287_36599448
ES.11743.55	chr15	-	2636	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	1581.14476902409	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599542_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.56	chr15	-	2287	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	563	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	1580.41437507344	3681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	1	True	NA	-7	True	AATAAA	-16	NA	36608654	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603263_36605685_36605802_36605987_36606182_36608557
ES.11743.58	chr15	-	3357	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	1581.86815415914	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	378	False	NA	-7	True	AATAAA	-16	NA	36609216	36595904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36602548_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.6	chr15	-	3944	14	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_9	1639.46497622975	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	377	False	NA	-6	True	AATAAA	-17	NA	36609217	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601263_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.61	chr15	-	2812	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1560.59396234451	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	377	False	NA	-8	True	AATAAA	-15	NA	36609217	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596335_36596801_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.62	chr15	-	2663	16	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1528.4851702112	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	378	False	NA	-8	True	AATAAA	-15	NA	36609216	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599531_36599682_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.63	chr15	-	4005	13	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-1	intron_retention	FALSE	canonical	3	5069	junction_8	548.968553035802	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	377	False	NA	-8	True	AATAAA	-15	NA	36609217	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.64	chr15	-	2889	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	5069	junction_9	535.194362747927	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	378	False	NA	-8	True	AATAAA	-15	NA	36609216	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.67	chr15	-	2831	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1570.99285517803	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	377	False	NA	-8	True	AATAAA	-15	NA	36609217	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600948_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.68	chr15	-	4730	9	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	-12	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	2029.99510082537	3680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	3872	False	NA	-8	True	AATAAA	-15	NA	36605722	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603900_36605490
ES.11743.69	chr15	-	4717	2	ISM	ENSMUSG00000022283.16	ENSMUST00000147116.2	866	3	-2950	-539	-924	-1	intron_retention	FALSE	canonical	3	6868	junction_1	0	3668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	-1	True	NA	-8	True	AATAAA	-15	NA	36600930	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36596900_36597207
ES.11743.70	chr15	-	2777	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_5	1541.99581777669	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	377	False	NA	-8	True	AATAAA	-15	NA	36609217	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598333_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.71	chr15	-	2126	14	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	-468	-1	at_least_one_novel_splicesite	FALSE	canonical	1	158	junction_3	1594.63449096127	3681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	3416	False	NA	-8	True	AATAAA	-15	NA	36606178	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597312_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987
ES.11743.74	chr15	-	3555	6	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	-892	-1	intron_retention	FALSE	canonical	3	6057	junction_3	295.98148590748	3668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	8696	False	NA	-8	True	AATAAA	-15	NA	36600898	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597786_36598216_36598372_36598445_36599287_36599448
ES.11743.75	chr15	-	3123	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	5069	junction_9	459.296722489875	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	378	False	NA	-8	True	AATAAA	-15	NA	36609216	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.76	chr15	-	4365	12	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	5069	junction_7	570.986083401353	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTATGCTTTTATT	379	False	NA	-8	True	AATAAA	-15	NA	36609215	36595905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597786_36598216_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.77	chr15	-	4065	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_11	2101.77355136668	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTTATGCTTTTAT	377	False	NA	-9	True	AATAAA	-14	NA	36609217	36595906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36602858_36602994_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.78	chr15	-	6383	13	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	5069	junction_9	538.751198761234	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTTATGCTTTTAT	380	False	NA	-9	True	AATAAA	-14	NA	36609214	36595906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36605802_36605987_36606182_36608557
ES.11743.79	chr15	-	3274	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2087.79972551908	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTTATGCTTTTAT	377	False	NA	-9	True	AATAAA	-14	NA	36609217	36595906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601112_36601252_36601558_36601654_36603089_36603688_36605685_36605802_36605987_36606182_36608557
ES.11743.8	chr15	-	4047	6	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	950	1	intron_retention	FALSE	canonical	3	5069	junction_5	583.205829874839	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGCTTTTATTTA	7954	False	NA	-6	True	AATAAA	-17	NA	36601640	36595903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597786_36598216_36600933_36601113_36601252_36601558
ES.11743.82	chr15	-	2807	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1579.82845878395	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTTATGCTTTTAT	378	False	NA	-9	True	AATAAA	-14	NA	36609216	36595906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601565_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.83	chr15	-	2790	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1580.90175926557	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGTTATGCTTTTAT	378	False	NA	-9	True	AATAAA	-14	NA	36609216	36595906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603213_36605692_36605802_36605987_36606182_36608557
ES.11743.85	chr15	-	2477	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	1580.81718727747	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGATGGTTATGCTTTTA	377	False	NA	-10	True	AATAAA	-13	NA	36609217	36595907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608894
ES.11743.86	chr15	-	4113	13	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-4	intron_retention	FALSE	canonical	3	5069	junction_9	534.897939382417	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGATGGTTATGCTTTT	378	False	NA	-11	True	AATAAA	-12	NA	36609216	36595908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36606182_36608557
ES.11743.87	chr15	-	2794	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	187	junction_5	1515.08537006052	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGATGGTTATGCTTTT	379	False	NA	-11	True	AATAAA	-12	NA	36609215	36595908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598355_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.88	chr15	-	4618	11	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-5	intron_retention	FALSE	canonical	3	5069	junction_7	558.104864698383	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGATGGTTATGCTTT	377	False	NA	-12	True	AATAAA	-11	NA	36609217	36595909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36606182_36608557
ES.11743.90	chr15	-	2783	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1580.48992662505	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTAGATGGTTATGCT	377	False	NA	-14	True	AATAAA	-9	NA	36609217	36595911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605775_36605987_36606182_36608557
ES.11743.91	chr15	-	4185	12	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-7	intron_retention	FALSE	canonical	3	5069	junction_8	538.211593156692	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTAGATGGTTATGCT	377	False	NA	-14	True	AATAAA	-9	NA	36609217	36595911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36606182_36608557
ES.11743.92	chr15	-	2774	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1575.23443671482	3691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTAGATGGTTATGCT	378	False	NA	-14	True	AATAAA	-9	NA	36609216	36595911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597735_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.93	chr15	-	2824	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1582.11551895117	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTAGATGGTTATGCT	379	False	NA	-14	True	AATAAA	-9	NA	36609215	36595911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600820_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.97	chr15	-	2674	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	143	0	103	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTCTTTAATTTTGT	377	False	NA	NA	False	TTTAAA	-3	NA	36609217	36596047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.98	chr15	-	2506	15	NNC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1581.86815415914	3683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACCGAGCAAATGCCAG	377	False	NA	NA	False	AATAAA	-30	NA	36609217	36596206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
ES.11743.99	chr15	-	2515	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	302	0	-56	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	3683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACCGAGCAAATGCCAG	377	False	NA	NA	False	AATAAA	-30	NA	36609217	36596206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ES.11744.1	chr15	+	2529	3	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	11	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36668077	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668981_36669505_36671021_36681567
ES.11744.10	chr15	+	2172	4	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36669890	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36669984_36670641_36670723_36673470_36673619_36679828
ES.11744.11	chr15	+	2394	4	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	5.18544972870135	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36670222	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36670723_36673470_36673619_36679828_36679873_36679976
ES.11744.12	chr15	+	2143	2	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36670238	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36670680_36679976
ES.11744.13	chr15	+	2328	4	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	5.18544972870135	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTGGACTTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	36670299	36681732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36670680_36673470_36673619_36679828_36679873_36679976
ES.11744.14	chr15	+	4119	2	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTCTGCTCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	36671383	36681712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36673619_36679828
ES.11744.15	chr15	+	4579	2	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGCAACATGCATAT	NA	False	NA	NA	False	NA	NA	NA	36672336	36683125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36673619_36679828
ES.11744.2	chr15	+	2426	6	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	7.16658914686757	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTGAACCCTTTGGA	NA	False	NA	NA	False	NA	NA	NA	36668078	36681723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668252_36669505_36669695_36669839_36669984_36670641_36670723_36673470_36673563_36679976
ES.11744.3	chr15	+	2959	5	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	9.12071817347735	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36668104	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668981_36669505_36669695_36673470_36673619_36679828_36679873_36679976
ES.11744.4	chr15	+	3124	6	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	8.26075057122535	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGTGAACCCTTTGGAC	NA	False	NA	NA	False	NA	NA	NA	36668107	36681724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668981_36669505_36669695_36669890_36670012_36673469_36673619_36679828_36679873_36679976
ES.11744.5	chr15	+	2502	7	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	7.06320670013903	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTTTGGACTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	36668110	36681731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668252_36669505_36669695_36669839_36669984_36670641_36670723_36673470_36673619_36679828_36679873_36679976
ES.11744.6	chr15	+	1143	2	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGATGGGTTTCATTG	NA	False	NA	NA	False	AATAAA	-11	NA	36668110	36669778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668981_36669505
ES.11744.7	chr15	+	3156	6	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	8.23164625090267	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAAAGTCTGCTCCTC	NA	False	NA	NA	False	NA	NA	NA	36668110	36681708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668981_36669505_36669695_36669839_36670012_36673469_36673619_36679828_36679873_36679976
ES.11744.8	chr15	+	2154	4	Antisense	novelGene_ENSMUSG00000115127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.40870359029762	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	36668132	36681678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36668252_36669505_36669695_36669839_36669984_36679976
ES.11744.9	chr15	+	1648	1	Intergenic	novelGene_9792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTTTCATTGCAATATT	NA	False	NA	NA	False	AATAAA	-18	NA	36668137	36669785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36668100_36669800
ES.11745.1	chr15	+	324	1	Intergenic	novelGene_9793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAAAGAAGAAGAATG	4848	False	NA	NA	False	NA	NA	NA	36731771	36732095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36731800_36732100
ES.11746.1	chr15	+	3847	1	Intergenic	novelGene_9794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTTTATATGTGTATGT	245	False	NA	NA	False	TTTAAA	-14	NA	36760674	36764521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36760700_36764500
ES.11746.2	chr15	+	1798	1	Intergenic	novelGene_9795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCTGGTTTTGTCA	248	False	NA	NA	False	ATTAAA	-20	NA	36760677	36762475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36760700_36762500
ES.11747.1	chr15	+	2408	1	Antisense	novelGene_ENSMUSG00000022285.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATACATGGGATTTTG	9361	False	NA	NA	False	TTTAAA	-23	NA	36769790	36772198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36769800_36772200
ES.11748.1	chr15	+	4420	1	Antisense	novelGene_ENSMUSG00000022285.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAATGTAACTGCATT	1156	False	NA	NA	False	AATAAA	-12	NA	36772575	36776995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_36772600_36777000
ES.11749.1	chr15	+	5229	1	Intergenic	novelGene_9796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAACAAACAAAAAACGTA	NA	False	NA	NA	False	NA	NA	NA	36785199	36790428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36785200_36790400
ES.11749.2	chr15	+	2745	1	Intergenic	novelGene_9797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTGTAAGGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	36785208	36787953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_36785200_36788000
ES.1175.1	chr1	-	136	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3643	False	NA	NA	False	NA	NA	NA	118295948	118295812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118295800_118295900
ES.11750.1	chr15	-	5313	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	269	-3460	-49	2526	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGTGGTTCCGTTATA	709	False	NA	NA	False	AATAAA	-33	NA	36793812	36768487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.12	chr15	-	3447	6	NIC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	57	504	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	1622.98596420302	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCAAGGCTTCACGTC	1920	False	NA	-5	True	AATAAA	-30	NA	36792601	36770509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792355
ES.11750.13	chr15	-	3287	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	-51	503	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	1669.21123887901	2881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATCAAGGCTTCACGT	1812	False	NA	-6	True	AATAAA	-29	NA	36792709	36770510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792622
ES.11750.14	chr15	-	3175	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	238	-1291	-80	357	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGTTTGATTTTAGTT	678	False	NA	-41	True	NA	NA	NA	36793843	36770656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.16	chr15	-	2886	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	29	6	at_least_one_novel_splicesite	FALSE	canonical	2	98	junction_5	1641.71398239766	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCAGTGGTGAGGGAGG	1892	False	NA	-33	True	NA	NA	NA	36792629	36771007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792446
ES.11750.17	chr15	-	863	3	NNC	ENSMUSG00000022285.18	novel	3288	7	NA	NA	-81	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1327	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTCTCAGTGGTGAGG	677	False	NA	-37	True	NA	NA	NA	36793844	36771011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36771448_36790927_36791233_36793722
ES.11750.18	chr15	-	3288	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	1	-1	1	1	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGTCTCAGTGGTGAG	NA	False	NA	-38	True	NA	NA	NA	36794781	36771012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ES.11750.19	chr15	-	3025	6	NIC	ENSMUSG00000022285.18	novel	3288	7	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	347	junction_5	1542.51527058892	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	782	False	NA	-39	True	NA	NA	NA	36793739	36771013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793411
ES.11750.2	chr15	-	3907	1	Genic_Genomic	ENSMUSG00000022285.18	novel	NA	NA	NA	NA	19959	2221	mono-exon	FALSE	NA	NA	NA	NA	NA	2877	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGATGTGTAAGGAAAG	NA	False	NA	NA	False	AATAAA	-27	NA	36772699	36768792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_36768800_36772700
ES.11750.20	chr15	-	6351	4	ISM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	14210	0	12086	0	3prime_fragment	FALSE	canonical	3	3946	junction_3	166.194664976547	2878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	9022	False	NA	-39	True	NA	NA	NA	36780572	36771013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489
ES.11750.21	chr15	-	2817	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	267	-799	267	0	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	13	True	NA	-39	True	NA	NA	NA	36794508	36771013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ES.11750.23	chr15	-	2816	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	-85	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1613.93749569183	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	673	False	NA	-40	True	NA	NA	NA	36793848	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775573_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.25	chr15	-	2789	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	697	False	NA	-40	True	NA	NA	NA	36793824	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791224_36793722
ES.11750.27	chr15	-	2920	5	NIC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	-102	-1	intron_retention	FALSE	canonical	3	2654	junction_4	652.276015196021	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	656	False	NA	-40	True	NA	NA	NA	36793865	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.28	chr15	-	3375	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	1825	False	NA	-40	True	NA	NA	NA	36792696	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792017
ES.11750.29	chr15	-	4395	5	ISM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	1851	1	-273	-1	3prime_fragment	FALSE	canonical	3	3946	junction_3	159.548386077704	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	1590	False	NA	-40	True	NA	NA	NA	36792931	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927
ES.11750.3	chr15	-	3629	7	NIC	ENSMUSG00000022285.18	novel	3288	7	NA	NA	228	573	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	1538.41141008076	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTGGTGTGTGTGTG	NA	False	NA	-2	True	AATACA	-35	NA	36794547	36770440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793923_36794388
ES.11750.30	chr15	-	3077	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	333	junction_5	1548.09134097443	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	791	False	NA	-40	True	NA	NA	NA	36793730	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793349
ES.11750.32	chr15	-	2993	6	NIC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	1622.98596420302	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGAGTCTCAGTGGTG	1869	False	NA	-40	True	NA	NA	NA	36792652	36771014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792355
ES.11750.33	chr15	-	2838	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	-107	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	1669.21123887901	2880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATGAGTCTCAGTGGT	1756	False	NA	-41	True	NA	NA	NA	36792765	36771015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792622
ES.11750.36	chr15	-	2219	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	285	784	278	15	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	2859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTAATGTAGCTTCCATC	24	False	NA	NA	False	CATAAA	-11	NA	36794497	36771797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ES.11750.39	chr15	-	2149	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	34	6	at_least_one_novel_splicesite	FALSE	canonical	3	333	junction_5	1548.09134097443	2856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTTTTCTCTACAGCT	792	False	NA	-6	True	NA	NA	NA	36793729	36771941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793349
ES.11750.4	chr15	-	3417	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	37	573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTGGTGTGTGTGTG	795	False	NA	-2	True	AATACA	-35	NA	36793726	36770440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791065_36793411
ES.11750.40	chr15	-	4313	5	FSM	ENSMUSG00000022285.18	ENSMUST00000154879.2	924	5	-47	-3342	-47	1	multi-exon	FALSE	canonical	3	2654	junction_4	688.405176839919	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAACTACTTTTCTCTA	711	False	NA	-11	True	NA	NA	NA	36793810	36771946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.41	chr15	-	1681	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	300	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	7	True	NA	-13	True	NA	NA	NA	36794475	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791065_36794388
ES.11750.42	chr15	-	2082	7	NIC	ENSMUSG00000022285.18	novel	3288	7	NA	NA	267	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	1538.41141008076	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	13	True	NA	-13	True	NA	NA	NA	36794508	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793923_36794388
ES.11750.45	chr15	-	2234	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	360	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	1669.21123887901	2855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	1427	False	NA	-13	True	NA	NA	NA	36793094	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792622
ES.11750.47	chr15	-	2079	6	NIC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	35	-1	combination_of_known_junctions	FALSE	canonical	3	347	junction_5	1542.51527058892	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	793	False	NA	-13	True	NA	NA	NA	36793728	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793411
ES.11750.48	chr15	-	1870	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	-73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1613.93749569183	2855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	685	False	NA	-13	True	NA	NA	NA	36793836	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775665_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.49	chr15	-	2345	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAACTACTTTTCTC	1921	False	NA	-13	True	NA	NA	NA	36792600	36771948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792017
ES.11750.5	chr15	-	3353	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	291	-1359	291	560	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGTTGAATCCAGCAG	-2	True	NA	-15	True	AATACA	-22	NA	36794484	36770453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ES.11750.50	chr15	-	2007	6	NIC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	57	-2	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	1622.98596420302	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCAACTACTTTTCT	1920	False	NA	-14	True	NA	NA	NA	36792601	36771949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792355
ES.11750.51	chr15	-	1881	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	267	137	267	-2	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCAACTACTTTTCT	13	True	NA	-14	True	NA	NA	NA	36794508	36771949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ES.11750.52	chr15	-	1839	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	-47	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1668.45557327727	2854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTTTCAACTACTT	711	False	NA	-18	True	NA	NA	NA	36793810	36771953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776495_36776614_36790927_36791233_36793722
ES.11750.53	chr15	-	1841	6	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	34	-302	at_least_one_novel_splicesite	FALSE	canonical	3	333	junction_5	1548.09134097443	2837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCCATACGTATCAAGC	792	False	NA	NA	False	NA	NA	NA	36793729	36772249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793349
ES.11750.54	chr15	-	1581	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	232	309	-86	-309	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCCGGCTCCATACGT	672	False	NA	NA	False	NA	NA	NA	36793849	36772256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ES.11750.55	chr15	-	1562	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	267	-325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1973.86459515338	2835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGAGTTGCTTGGTGT	13	True	NA	NA	False	TTTAAA	-45	NA	36794508	36772272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775655_36775824_36776489_36776614_36790927_36791233_36794388
ES.11750.56	chr15	-	2489	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	66	-325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGAGTTGCTTGGTGT	1929	False	NA	NA	False	TTTAAA	-45	NA	36792592	36772272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36791541
ES.11750.58	chr15	-	3899	2	ISM	ENSMUSG00000022285.18	ENSMUST00000110359.2	374	3	866	-3606	156	3419	3prime_fragment	FALSE	canonical	3	2654	junction_1	0	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACAATAAAAGCCTGT	596	False	NA	NA	False	AATAAA	-7	NA	36793925	36787536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_36791233_36793722
ES.11750.6	chr15	-	3910	6	NNC	ENSMUSG00000022285.18	novel	2285	6	NA	NA	-12	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1680.76906206653	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGTTGAATCCAGCAG	1851	False	NA	-15	True	AATACA	-22	NA	36792670	36770453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36792017
ES.11751.1	chr15	-	2743	1	Intergenic	novelGene_9798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCCCAGTTTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	36823973	36821230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_36821200_36824000
ES.11752.1	chr15	+	1128	7	NNC	ENSMUSG00000115333.2	novel	962	3	NA	NA	-4835	6782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.11803398874989	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTATGTTTGCTCAAGA	NA	False	NA	NA	False	NA	NA	NA	36934272	36956631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36934771_36945374_36945463_36949130_36949292_36952395_36952472_36953332_36953403_36956141_36956277_36956531
ES.11752.2	chr15	+	1063	8	NNC	ENSMUSG00000115333.2	novel	962	3	NA	NA	-4627	6784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.04978131833565	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTTTGCTCAAGATA	NA	False	NA	NA	False	NA	NA	NA	36934480	36956633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_36934771_36942907_36943049_36945374_36945463_36949130_36949292_36952395_36952472_36953332_36953403_36956141_36956277_36956531
ES.11753.1	chr15	-	2578	1	Antisense	novelGene_ENSMUSG00000115333.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTAACCAAGACACTCCT	NA	False	NA	NA	False	NA	NA	NA	36946322	36943744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_36943700_36946300
ES.11754.1	chr15	-	8513	1	Intergenic	novelGene_9799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGTTGTCACATGTGT	NA	False	NA	NA	False	NA	NA	NA	36987065	36978552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_36978600_36987100
ES.11755.1	chr15	+	170	1	Intergenic	novelGene_9800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAACAAAATAT	NA	False	NA	NA	False	NA	NA	NA	37001857	37002027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_37001900_37002000
ES.11756.1	chr15	-	5626	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	15	3023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2930.49615039843	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGCTGAGATGCTCGA	170	False	NA	NA	False	ATTAAA	-21	NA	37007631	36994247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_36995805_36997603_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.10	chr15	-	2443	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	54	1618	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	3342.91462462026	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	209	False	NA	-15	True	ATTAAA	-10	NA	37007592	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001890_37001954_37002082_37002191_37003929_37004067_37007371
ES.11756.11	chr15	-	2337	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	89	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3122.70683862575	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	244	False	NA	-15	True	ATTAAA	-10	NA	37007557	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37007379
ES.11756.12	chr15	-	2367	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	102	1618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3245.74802198541	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	257	False	NA	-15	True	ATTAAA	-10	NA	37007544	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002226_37003929_37004067_37007371
ES.11756.13	chr15	-	2474	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	6	1618	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	3143.77363808211	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	161	False	NA	-15	True	ATTAAA	-10	NA	37007640	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37005373_37005420_37007371
ES.11756.14	chr15	-	2593	4	FSM	ENSMUSG00000062397.9	ENSMUST00000226453.2	517	4	-287	-1789	100	1618	multi-exon	FALSE	canonical	2	5	junction_3	3120.35097740979	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	255	False	NA	-15	True	ATTAAA	-10	NA	37007546	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007112
ES.11756.16	chr15	-	2232	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-168	1618	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3121.76449392896	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	NA	False	NA	-15	True	ATTAAA	-10	NA	37008185	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37008112
ES.11756.18	chr15	-	3808	2	NNC	ENSMUSG00000062397.9	novel	493	2	NA	NA	102	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	257	False	NA	-15	True	ATTAAA	-10	NA	37007544	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001861_37006343
ES.11756.2	chr15	-	2138	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	53	-1790	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	2928.33536330797	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGCTGTGTGTAGTG	208	False	NA	NA	False	AGTAAA	-16	NA	37007593	36999060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37000690_37001125_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.20	chr15	-	2324	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	35	1551	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	3191.40599457703	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCATGTTTAGCTGACA	190	False	NA	-82	True	ATTAAA	-16	NA	37007611	36999320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002090_37002191_37003929_37004067_37007371
ES.11756.21	chr15	-	1955	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	84	2378	84	1223	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTAACTGTTTTCTGA	239	False	NA	NA	False	AATAGA	-14	NA	37007562	36999648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.22	chr15	-	1304	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	86	3027	86	574	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAAAGGCTGTCTAGT	241	False	NA	NA	False	AATAAA	-33	NA	37007560	37000297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.23	chr15	-	1115	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	86	3216	86	385	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGTTCAAATTCATTT	241	False	NA	NA	False	TATAAA	-15	NA	37007560	37000486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.24	chr15	-	943	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	-95	3569	-95	32	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTAACTTTCCTTATTA	60	False	NA	6	True	GATAAA	-16	NA	37007741	37000839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.25	chr15	-	4153	3	ISM	ENSMUSG00000062397.9	ENSMUST00000226671.2	447	4	357	-204	-14	18	3prime_fragment	FALSE	canonical	3	6501	junction_2	120	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTAGAAATTCTGTTCT	141	False	NA	-8	True	AATAAA	-36	NA	37007660	37000853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37001168_37002082_37002191_37003929
ES.11756.26	chr15	-	1730	3	NIC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	15	14	intron_retention	FALSE	canonical	3	6501	junction_1	260	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTTCTAGAAATTCTG	170	False	NA	-12	True	AATAAA	-32	NA	37007631	37000857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37002191_37003929_37004067_37007371
ES.11756.27	chr15	-	1525	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	89	12	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	3171.65112975701	1963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGGTTCTAGAAATTC	244	False	NA	-14	True	AATAAA	-30	NA	37007557	37000859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001954_37002082_37002191_37003929_37004067_37007371
ES.11756.28	chr15	-	932	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3355.07320151141	1963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATAAATGGTTCTAGAAA	155	False	NA	-17	True	AATAAA	-27	NA	37007646	37000862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001890_37001998_37002082_37002191_37003929_37004067_37007371
ES.11756.29	chr15	-	785	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	86	9	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	3143.77363808211	1963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATAAATGGTTCTAGAAA	241	False	NA	-17	True	AATAAA	-27	NA	37007560	37000862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37005373_37005420_37007371
ES.11756.3	chr15	-	2620	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	7	1790	7	-1790	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGCTGTGTGTAGTG	162	False	NA	NA	False	AGTAAA	-16	NA	37007639	36999060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.32	chr15	-	597	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-69	1	at_least_one_novel_splicesite	FALSE	canonical	3	636	junction_3	2823.0568538377	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCGCAGGATAAATGGT	86	False	NA	-25	True	AATAAA	-19	NA	37007715	37000870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37007660
ES.11756.33	chr15	-	2800	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	3	666	junction_3	2808.92328125921	1963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCGCAGGATAAATGGT	170	False	NA	-25	True	AATAAA	-19	NA	37007631	37000870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37005373
ES.11756.34	chr15	-	1046	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	3183.40991181888	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCGCAGGATAAATGGT	151	False	NA	-25	True	AATAAA	-19	NA	37007650	37000870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001857_37002191_37003929_37004067_37007371
ES.11756.35	chr15	-	2037	2	FSM	ENSMUSG00000062397.9	ENSMUST00000226257.2	493	2	-1545	1	478	-1	multi-exon	FALSE	canonical	3	6741	junction_1	0	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACCGCAGGATAAATG	3977	False	NA	-27	True	AATAAA	-17	NA	37003824	37000872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082
ES.11756.36	chr15	-	862	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	3342.91462462026	1961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACACCGCAGGATAAAT	170	False	NA	-28	True	AATAAA	-16	NA	37007631	37000873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001890_37001954_37002082_37002191_37003929_37004067_37007371
ES.11756.37	chr15	-	907	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	3367.78349771775	1961	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTACAACACCGCAGGA	153	False	NA	-33	True	AATAAA	-11	NA	37007648	37000878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001857_37001954_37002082_37002191_37003929_37004067_37007371
ES.11756.38	chr15	-	569	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	63	3785	63	2	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTTACGCTGTTCCCT	218	False	NA	-2	True	AATAAA	-17	NA	37007583	37001055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.4	chr15	-	2512	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	-68	1973	-68	1628	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTAATTTCTTGTACCG	87	False	NA	-5	True	ATTAAA	-20	NA	37007714	36999243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ES.11756.5	chr15	-	5753	3	ISM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	-5	1974	-5	1627	intron_retention	FALSE	canonical	3	6501	junction_2	120	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	150	False	NA	-6	True	ATTAAA	-19	NA	37007651	36999244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37001168_37002082_37002191_37003929
ES.11756.6	chr15	-	3364	3	NIC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-11	1622	intron_retention	FALSE	canonical	3	6501	junction_1	260	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAACTAGTCTAATTTCTT	144	False	NA	-11	True	ATTAAA	-14	NA	37007657	36999249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37002191_37003929_37004067_37007371
ES.11756.7	chr15	-	2214	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-66	1621	at_least_one_novel_splicesite	FALSE	canonical	3	636	junction_3	2823.0568538377	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAACTAGTCTAATTTCT	89	False	NA	-12	True	ATTAAA	-13	NA	37007712	36999250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37007660
ES.11756.8	chr15	-	2551	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-21	1618	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	3367.78349771775	2000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	134	False	NA	-15	True	ATTAAA	-10	NA	37007667	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001857_37001954_37002082_37002191_37003929_37004067_37007371
ES.11756.9	chr15	-	2601	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	58	1618	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	3183.40991181888	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	213	False	NA	-15	True	ATTAAA	-10	NA	37007588	36999253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37001168_37001857_37002191_37003929_37004067_37007371
ES.11757.1	chr15	-	212	1	Intergenic	novelGene_9801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCCATAATTTAGATAG	NA	False	NA	NA	False	NA	NA	NA	37011228	37011016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37011000_37011200
ES.11758.1	chr15	-	3832	1	Antisense	novelGene_ENSMUSG00000097259.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTGTCTGTTATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	37046165	37042333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_37042300_37046200
ES.11758.2	chr15	-	1853	1	Intergenic	novelGene_9802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCATTACCCATACTCC	NA	False	NA	NA	False	NA	NA	NA	37046215	37044362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37044400_37046200
ES.11759.1	chr15	-	1712	2	Intergenic	novelGene_9803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	5400	False	NA	NA	False	NA	NA	NA	37075003	37073229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37074754_37074815
ES.1176.1	chr1	-	174	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAATAA	8982	False	NA	NA	False	NA	NA	NA	118302210	118302036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118302000_118302200
ES.11760.1	chr15	+	149	1	Intergenic	novelGene_9804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTACATATAATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	37105313	37105462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_37105300_37105500
ES.11760.2	chr15	+	179	2	Antisense	novelGene_ENSMUSG00000115848.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	37105314	37173039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_37105341_37172886
ES.11761.1	chr15	-	204	1	Intergenic	novelGene_9805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	37106163	37105959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37106000_37106200
ES.11762.1	chr15	-	2203	3	Intergenic	novelGene_9806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGAGAGTTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	37144698	37139931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37142022_37142607_37142681_37144658
ES.11763.1	chr15	-	168	1	Intergenic	novelGene_9807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37194320	37194152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37194200_37194300
ES.11764.1	chr15	-	218	1	Intergenic	novelGene_9808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAAAAAAAATCCCATCA	NA	False	NA	NA	False	NA	NA	NA	37221732	37221514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37221500_37221700
ES.11765.1	chr15	+	4958	16	FSM	ENSMUSG00000022286.17	ENSMUST00000022895.15	4947	16	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_6	24.3507700083591	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTCTAGTACTTTCTG	182	False	NA	20	True	AATAAA	-21	NA	37233268	37363813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_37233651_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ES.11765.2	chr15	+	4728	16	NIC	ENSMUSG00000022286.17	novel	4947	16	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.3799553367561	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTAGTACTTTCTGTG	3	True	NA	22	True	AATAAA	-23	NA	37233299	37363815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_37233450_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ES.11765.4	chr15	+	4710	16	NNC	ENSMUSG00000022286.17	novel	717	7	NA	NA	-21225	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.3507700083591	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAAACAGCTCTCTAG	213	False	NA	11	True	AATAAA	-12	NA	37264611	37363804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_37264758_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344899_37344992_37348012_37348099_37358613_37358679_37360980
ES.11765.5	chr15	+	3109	3	ISM	ENSMUSG00000022286.17	ENSMUST00000161933.2	3617	9	29243	-9	11909	2	3prime_fragment	FALSE	canonical	3	68	junction_1	5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTAGTACTTTCTGTG	124	False	NA	22	True	AATAAA	-23	NA	37347889	37363815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_37348099_37358613_37358679_37360980
ES.11765.6	chr15	+	3018	4	NNC	ENSMUSG00000022286.17	novel	4947	16	NA	NA	11912	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	32.782108941718	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAACAGCTCTCTAGTA	127	False	NA	13	True	AATAAA	-14	NA	37347892	37363806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_37347934_37348012_37348099_37358613_37358679_37360980
ES.11765.7	chr15	+	3201	3	NNC	ENSMUSG00000022286.17	novel	3617	9	NA	NA	11923	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	32.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAACAGCTCTCTAGTAC	138	False	NA	14	True	AATAAA	-15	NA	37347903	37363807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_37348099_37358613_37358679_37360866
ES.11765.8	chr15	+	5375	2	ISM	ENSMUSG00000022286.17	ENSMUST00000159221.2	717	7	11940	-2626	11940	-3	intron_retention	FALSE	canonical	3	68	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTCTCTAGTACTTT	155	False	NA	17	True	AATAAA	-18	NA	37347920	37363810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_37348099_37358613
ES.11765.9	chr15	+	2914	2	NIC	ENSMUSG00000022286.17	novel	717	7	NA	NA	12032	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACAGCTCTCTAGTACT	247	False	NA	15	True	AATAAA	-16	NA	37348012	37363808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_37348099_37360980
ES.11766.1	chr15	-	177	1	Intergenic	novelGene_9809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	37246961	37246784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37246800_37247000
ES.11767.1	chr15	-	176	1	Intergenic	novelGene_9810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	37272475	37272299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37272300_37272500
ES.11768.1	chr15	-	206	1	Intergenic	novelGene_9811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTAGTTGTAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	37282855	37282649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37282600_37282900
ES.11769.1	chr15	-	2999	2	Antisense	novelGene_ENSMUSG00000022286.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAAACCCAAAACACTG	NA	False	NA	NA	False	AAAACA	-42	NA	37349756	37346713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_37347857_37347900
ES.1177.1	chr1	-	6790	1	Antisense	novelGene_ENSMUSG00000064302.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	118317023	118310233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118310200_118317000
ES.1177.2	chr1	-	5544	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCTGTGGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	118316211	118310667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118310700_118316200
ES.1177.3	chr1	-	1625	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTGGTATTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	118316595	118314970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118315000_118316600
ES.11770.1	chr15	+	175	1	Intergenic	novelGene_9812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATTAACAAACTT	NA	False	NA	NA	False	NA	NA	NA	37675791	37675966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_37675800_37676000
ES.11771.1	chr15	-	171	1	Intergenic	novelGene_9813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	37916254	37916083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_37916100_37916300
ES.11772.1	chr15	+	178	1	Intergenic	novelGene_9814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCTGGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	37949353	37949531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_37949400_37949500
ES.11773.1	chr15	+	6422	1	Antisense	novelGene_ENSMUSG00000022292.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTACTTGTATTCCAGAT	NA	False	NA	NA	False	NA	NA	NA	37953936	37960358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_37953900_37960400
ES.11774.1	chr15	-	4593	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	-19	-13	-19	13	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTGTACATTTTTAAA	7089	False	NA	NA	False	AATAAA	-29	NA	37961366	37924182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ES.11774.10	chr15	-	227	1	ISM	ENSMUSG00000022292.17	ENSMUST00000127362.2	1782	3	469	9395	469	-7691	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTAGCAGTCTTTTG	6170	False	NA	NA	False	AATACA	-33	NA	37954913	37954686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37954700_37954900
ES.11774.2	chr15	-	4661	2	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	30844	7	18183	-7	3prime_fragment	FALSE	canonical	3	45	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATTGTGTAGTTATA	NA	False	NA	NA	False	AATAAA	-9	NA	37930503	37924202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37927642_37929281
ES.11774.3	chr15	-	1146	8	NIC	ENSMUSG00000022292.17	novel	4561	9	NA	NA	-171	-1774	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	18.6087537004958	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGACTAGTGGTTTTA	6722	False	NA	NA	False	AATAAA	-11	NA	37961733	37929262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961461
ES.11774.4	chr15	-	1989	5	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	20	19299	20	1797	5prime_fragment	FALSE	canonical	3	46	junction_2	5.71729831301464	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	7128	False	NA	NA	False	AATATA	-42	NA	37961327	37943494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ES.11774.5	chr15	-	1637	4	ISM	ENSMUSG00000022292.17	ENSMUST00000144498.8	658	6	64	11614	-16	1797	5prime_fragment	FALSE	canonical	0	0	junction_1	27.1825107171668	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	7346	False	NA	NA	False	AATATA	-42	NA	37961109	37943494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37944837_37946978_37947096_37953842_37953999_37961087
ES.11774.6	chr15	-	2151	5	NIC	ENSMUSG00000022292.17	novel	4561	9	NA	NA	-5	1797	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	22.92787604642	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	-15	True	NA	NA	False	AATATA	-42	NA	37961098	37943494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37960696
ES.11774.7	chr15	-	10643	2	ISM	ENSMUSG00000022292.17	ENSMUST00000153481.2	389	4	-91	16006	-53	1797	5prime_fragment	FALSE	canonical	3	60	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	7229	False	NA	NA	False	AATATA	-42	NA	37961226	37943494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37953999_37961087
ES.11774.8	chr15	-	682	3	Fusion	ENSMUSG00000085442.2_ENSMUSG00000022292.17	novel	1782	3	NA	NA	-1301	50	multi-exon	FALSE	canonical	2	3	junction_1	28.5	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-16	NA	37945337	37943520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_37944053_37944741_37944837_37945282
ES.11774.9	chr15	-	1383	6	Fusion	ENSMUSG00000085442.2_ENSMUSG00000022292.17	novel	690	4	NA	NA	-74	48	multi-exon	FALSE	canonical	2	2	junction_1	21.9052505121489	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	7208	False	NA	NA	False	AATATA	-14	NA	37961247	37943522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_37944244_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ES.11775.1	chr15	+	315	1	Intergenic	novelGene_9815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-13	NA	37984941	37985256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_37984900_37985300
ES.11776.1	chr15	+	165	1	Intergenic	novelGene_9816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38039702	38039867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38039700_38039900
ES.11777.1	chr15	+	2547	1	Intergenic	novelGene_9818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	38048917	38051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38048900_38051500
ES.11777.2	chr15	+	1711	1	Intergenic	novelGene_9817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAGAACTCCTAACA	NA	False	NA	NA	False	AATAAA	-7	NA	38048917	38050628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38048900_38050600
ES.11778.1	chr15	+	1503	1	Intergenic	novelGene_9819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-36	NA	38060346	38061849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38060300_38061800
ES.11779.1	chr15	+	1891	2	Antisense	novelGene_ENSMUSG00000037487.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGAGCCACTGCTTA	NA	False	NA	NA	False	NA	NA	NA	38068571	38072669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_38069762_38071968
ES.11779.2	chr15	+	4098	1	Intergenic	novelGene_9820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGAGCCACTGCTTA	NA	False	NA	NA	False	NA	NA	NA	38068571	38072669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38068600_38072700
ES.1178.1	chr1	+	5493	37	FSM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	380	1693	-8	0	multi-exon	FALSE	canonical	0	0	junction_25	60.1851310541067	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATTCTTAATGCAATC	NA	False	NA	4	True	AATAAA	-15	NA	118317167	118535469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.11	chr1	+	7066	37	NNC	ENSMUSG00000064302.14	novel	7566	37	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.7641046811003	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATTAAAAAAA	NA	False	NA	-22	True	NA	NA	NA	118317195	118537162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118317252_118347169_118347487_118347554_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.12	chr1	+	7170	37	NNC	ENSMUSG00000064302.14	novel	6918	38	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	69.8526833882794	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	3	True	NA	NA	NA	118317195	118537187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437948_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.13	chr1	+	5343	37	FSM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	410	1813	-5	37	multi-exon	FALSE	canonical	0	0	junction_25	60.1851310541067	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCCAAGATTGGAACC	NA	False	NA	NA	False	ATTAAA	-15	NA	118317197	118535349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.14	chr1	+	3463	29	NIC	ENSMUSG00000064302.14	novel	7566	37	NA	NA	-3	3741	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	55.8388145852481	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCAGGATGGTGCCACC	NA	False	NA	NA	False	NA	NA	NA	118317199	118487794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118474610_118474680_118475594_118475759_118478816_118478896_118479742_118479887_118487715
ES.1178.15	chr1	+	4577	21	NNC	ENSMUSG00000064302.14	novel	7281	39	NA	NA	20	-1894	intron_retention	FALSE	canonical	0	0	junction_1	74.1424979347203	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATGGCTTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	118317266	118451709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118317344_118317536_118317688_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556
ES.1178.16	chr1	+	7194	36	NNC	ENSMUSG00000064302.14	novel	7281	39	NA	NA	322	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.3972480318757	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTAAAAAAGAAAATTAAAA	NA	False	NA	-25	True	NA	NA	NA	118317568	118537159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118317688_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.17	chr1	+	4999	36	NNC	ENSMUSG00000064302.14	novel	1034	9	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.1454698378699	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACAATTCTTAATGCA	NA	False	NA	1	True	AATAAA	-12	NA	118387322	118535466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118387395_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.18	chr1	+	5106	34	NIC	ENSMUSG00000064302.14	novel	7566	37	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	44.0087227350178	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACAATTCTTAATGCA	NA	False	NA	1	True	AATAAA	-12	NA	118387327	118535466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.19	chr1	+	6831	34	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	11	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	44.0087227350178	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGTTTTTCCTAGA	NA	False	NA	8	True	NA	NA	NA	118387328	118537192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.2	chr1	+	7242	38	NIC	ENSMUSG00000064302.14	novel	4914	39	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	76.2791287211084	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGTTTTTCCTAGA	NA	False	NA	8	True	NA	NA	NA	118317168	118537192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.20	chr1	+	4959	35	NNC	ENSMUSG00000064302.14	novel	1034	9	NA	NA	27	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.7369721970031	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCTTAATGCAATCATG	NA	False	NA	7	True	AATAAA	-18	NA	118387344	118535472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118387395_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.21	chr1	+	6676	35	NNC	ENSMUSG00000064302.14	novel	1034	9	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.7369721970031	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTTTTGAGTTTTTCCT	NA	False	NA	5	True	NA	NA	NA	118387344	118537189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118387395_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.22	chr1	+	6625	35	ISM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	70741	0	211	0	3prime_fragment	FALSE	canonical	0	0	junction_23	61.1648249662238	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATTAAAAAAA	NA	False	NA	-22	True	NA	NA	NA	118387528	118537162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.23	chr1	+	6110	28	NIC	ENSMUSG00000064302.14	novel	4042	33	NA	NA	-12604	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	46.6695178435304	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTTTTGAGTTTTTCCT	NA	False	NA	5	True	NA	NA	NA	118425362	118537189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.24	chr1	+	5906	27	ISM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	112241	-24	-8938	-1	3prime_fragment	FALSE	canonical	0	0	junction_15	66.0870973630241	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGACCTTTTGAGTTTTT	NA	False	NA	2	True	NA	NA	NA	118429028	118537186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.25	chr1	+	4811	16	NIC	ENSMUSG00000064302.14	novel	4042	33	NA	NA	-6794	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	58.997024407074	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	3	True	NA	NA	NA	118453014	118537187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.27	chr1	+	3961	10	ISM	ENSMUSG00000064302.14	ENSMUST00000204325.2	4301	15	19932	25	-2223	0	3prime_fragment	FALSE	canonical	3	204	junction_6	17.1147182345171	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATTAAAAAAA	9926	False	NA	-22	True	NA	NA	NA	118479740	118537162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.28	chr1	+	1975	8	ISM	ENSMUSG00000064302.14	ENSMUST00000204325.2	4301	15	28931	1722	6776	-4	3prime_fragment	FALSE	canonical	3	204	junction_4	18.7388061824348	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGACAATTCTTAATGC	6549	False	NA	0	True	AATAAA	-11	NA	118488739	118535465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.29	chr1	+	178	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	118505189	118505367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_118505200_118505400
ES.1178.3	chr1	+	7266	38	NIC	ENSMUSG00000064302.14	novel	5502	38	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	79.9326049208803	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGTTTTTCCTAGA	NA	False	NA	8	True	NA	NA	NA	118317168	118537192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118439904_118439953_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.30	chr1	+	12091	1	FSM	ENSMUSG00000064302.14	ENSMUST00000187575.3	4706	1	-7385	0	-7385	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATTAAAAAAA	NA	False	NA	-22	True	NA	NA	NA	118525071	118537162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118525100_118537200
ES.1178.4	chr1	+	7212	36	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	43.3379317288056	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCAGTTTTGTGTGTGTG	NA	False	NA	37	True	AATATA	-5	NA	118317176	118537221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.5	chr1	+	7226	37	NIC	ENSMUSG00000064302.14	novel	5502	38	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	65.2649100792633	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGAGTTTTTC	NA	False	NA	3	True	NA	NA	NA	118317176	118537187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118439904_118439953_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.6	chr1	+	5462	36	NIC	ENSMUSG00000064302.14	novel	7566	37	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	43.3379317288056	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTTAATGCAATCAT	NA	False	NA	6	True	AATAAA	-17	NA	118317176	118535471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.7	chr1	+	7204	37	FSM	ENSMUSG00000064302.14	ENSMUST00000178710.8	7566	37	392	-30	4	5	multi-exon	FALSE	canonical	0	0	junction_25	60.1851310541067	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGTTTTTCCTAGA	NA	False	NA	8	True	NA	NA	NA	118317179	118537192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.8	chr1	+	7207	37	NIC	ENSMUSG00000064302.14	novel	4914	39	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	66.4591678224632	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGAGTTTTTCCTAGA	NA	False	NA	8	True	NA	NA	NA	118317179	118537192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.1178.9	chr1	+	9400	36	NIC	ENSMUSG00000064302.14	novel	7207	37	NA	NA	-4	-10	intron_retention	FALSE	canonical	0	0	junction_24	43.3379317288056	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAAGACAATGCAGTTT	NA	False	NA	27	True	NA	NA	NA	118317180	118537211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118475389_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ES.11780.1	chr15	-	11307	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	25	1540	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	196.412043531534	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATATGTCTCCTTGCTGT	NA	False	NA	NA	False	TTTAAA	-5	NA	38079073	37966031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991616_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.10	chr15	-	3567	18	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-545	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	222.235558807802	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGAAGAAACAGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	37992426	37967571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195
ES.11780.103	chr15	-	9207	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	195.271588212165	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTAGCTTTTTTATG	NA	False	NA	-14	True	AATAAA	-22	NA	38079071	37968111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989904_37991546_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.104	chr15	-	7107	36	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	713	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	218.346786520144	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTAGCTTTTTTA	NA	False	NA	-16	True	AATAAA	-20	NA	38011347	37968113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869
ES.11780.11	chr15	-	6935	40	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-3422	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	234.996658109884	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTGAAGAAACAGTT	3522	False	NA	NA	False	AATAAA	-19	NA	38018719	37967573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004605_38004781_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013810_38015181_38015393_38018522
ES.11780.113	chr15	-	9209	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	22	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	196.965749661797	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTTCATTTTAGCT	NA	False	NA	-22	True	AATAAA	-14	NA	38079076	37968119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984202_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.115	chr15	-	9000	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	222.655485492669	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTTCATTTTAGCT	NA	False	NA	-22	True	AATAAA	-14	NA	38079071	37968119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996867_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013810_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.116	chr15	-	9288	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	195.215305388149	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38079071	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991449_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.118	chr15	-	9197	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	33	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.496609171065	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38079065	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002707_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.119	chr15	-	8421	55	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-30660	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	214.277160012809	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38045957	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976472_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004607_38004781_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936
ES.11780.124	chr15	-	3615	22	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	2274	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	263.552014598813	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	6595	False	NA	-23	True	AATAAA	-13	NA	37998097	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992311_37996798_37997011_37997167_37997437_37997964
ES.11780.127	chr15	-	9184	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	30	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	192.404323243668	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38079068	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976491_37978286_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.129	chr15	-	7038	45	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-9801	17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	208.112508311496	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38025098	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990
ES.11780.13	chr15	-	5661	31	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	3556	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	231.373485948585	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTGAAGAAACAGTT	3480	False	NA	NA	False	AATAAA	-19	NA	38006192	37967573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997960_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004785_38004933_38006111
ES.11780.132	chr15	-	7678	49	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	32	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	196.71519528383	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	NA	False	NA	-23	True	AATAAA	-13	NA	38079066	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976383_37991536_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.138	chr15	-	7303	47	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-13663	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	225.318154603554	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTCATTTTAGC	8957	False	NA	-23	True	AATAAA	-13	NA	38028960	37968120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000255_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004615_38004789_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876
ES.11780.143	chr15	-	9231	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	-24	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	213.231205427103	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTTTTCATTTTAG	NA	False	NA	-24	True	AATAAA	-12	NA	38079122	37968121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998190_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004786_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.146	chr15	-	7628	50	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-15860	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	220.553291222449	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTTTTCATTTTAG	6760	False	NA	-24	True	AATAAA	-12	NA	38031157	37968121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000928_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065
ES.11780.148	chr15	-	9159	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	25	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	219.859805617217	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTTTTCATTTTAG	NA	False	NA	-24	True	AATAAA	-12	NA	38079073	37968121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991616_37992195_37992427_37996798_37997011_37997167_37997437_37997965_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.15	chr15	-	8023	48	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-15642	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	200.123920414216	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTGAAGAAACAGTT	6978	False	NA	NA	False	AATAAA	-19	NA	38030939	37967573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865
ES.11780.151	chr15	-	10908	58	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	15	15	intron_retention	FALSE	canonical	0	0	junction_20	188.538806355616	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	NA	False	NA	-25	True	AATAAA	-11	NA	38079083	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.153	chr15	-	9036	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	41	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	208.354326964438	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	NA	False	NA	-25	True	AATAAA	-11	NA	38079057	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996917_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.154	chr15	-	7191	47	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	31331	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	241.672695750793	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	NA	False	NA	-25	True	AATAAA	-11	NA	38047338	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021867_38042016_38042209_38045936_38046057_38047278
ES.11780.16	chr15	-	4212	22	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	3610	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	303.595894438942	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTGAAGAAACAGTT	3534	False	NA	NA	False	AATAAA	-19	NA	38006138	37967573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976383_37991536_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004781_38004933_38006111
ES.11780.160	chr15	-	4137	11	NIC	ENSMUSG00000037487.8	novel	2279	12	NA	NA	250	15	intron_retention	FALSE	canonical	3	678	junction_10	102.370894301066	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	650	False	NA	-25	True	AATAAA	-11	NA	37984361	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190
ES.11780.161	chr15	-	6378	42	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-3921	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	210.410196811063	899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	3023	False	NA	-25	True	AATAAA	-11	NA	38019218	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996867_37996968_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131
ES.11780.163	chr15	-	9426	60	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	7	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	210.783913254206	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGTTTTCATTTTA	NA	False	NA	-25	True	AATAAA	-11	NA	38079091	37968122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38011975_38012187_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.166	chr15	-	9295	58	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	9	14	intron_retention	FALSE	canonical	0	0	junction_20	176.483083764514	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGTGTTTTCATTTT	NA	False	NA	-26	True	AATAAA	-10	NA	38079089	37968123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.169	chr15	-	9187	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	197.080979058806	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	NA	False	NA	-43	True	NA	NA	NA	38079071	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013805_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.170	chr15	-	5696	19	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	2681	-3	intron_retention	FALSE	canonical	3	678	junction_10	99.042156506369	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	7002	False	NA	-43	True	NA	NA	NA	37997690	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798
ES.11780.173	chr15	-	2570	10	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	2586	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	297.101595459687	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	6907	False	NA	-43	True	NA	NA	NA	37997785	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976383_37991536_37991615_37992195_37992427_37996798
ES.11780.174	chr15	-	8319	42	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-4440	-3	intron_retention	FALSE	canonical	0	0	junction_20	207.786077816691	900	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	2504	False	NA	-43	True	NA	NA	NA	38019737	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996917_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673
ES.11780.177	chr15	-	9173	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.149794455923	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	NA	False	NA	-43	True	NA	NA	NA	38079070	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004605_38004781_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.180	chr15	-	1826	11	NNC	ENSMUSG00000037487.8	novel	2279	12	NA	NA	-1729	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	283.181496570662	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	3217	False	NA	-43	True	NA	NA	NA	37981794	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975797_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709
ES.11780.181	chr15	-	9332	60	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	205.230305537048	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	NA	False	NA	-43	True	NA	NA	NA	38079074	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970082_37970235_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.182	chr15	-	8835	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	-60	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	197.150699555733	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	122	False	NA	-43	True	NA	NA	NA	38078729	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980051_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.185	chr15	-	8592	58	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	30284	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	217.905285503341	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	NA	False	NA	-43	True	NA	NA	NA	38048385	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975861_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996917_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348
ES.11780.186	chr15	-	9114	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.331694968786	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTAAGTATG	NA	False	NA	-43	True	NA	NA	NA	38079071	37968140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019224_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.187	chr15	-	8971	58	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	232.100685531234	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTTCAAAATAAAAAATTA	NA	False	NA	-49	True	NA	NA	NA	38079071	37968146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991616_37992195_37992427_37996798_37996917_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.188	chr15	-	8970	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	13	259	13	175	multi-exon	FALSE	canonical	0	0	junction_21	176.45579964147	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTGAGAAGCACTGG	NA	False	NA	NA	False	ATTAAA	-31	NA	38079085	37968361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.19	chr15	-	3602	5	ISM	ENSMUSG00000037487.8	ENSMUST00000226369.2	3562	7	2694	-560	-2029	-6	3prime_fragment	FALSE	canonical	3	953	junction_2	19.3067345763078	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGTAACATTGAAGAAAC	9380	False	NA	NA	False	AATAAA	-15	NA	37975631	37967577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546
ES.11780.190	chr15	-	6551	41	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	6	-3417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.654634068067	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGTTTAAGTATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	38079092	37992006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004773_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.191	chr15	-	5717	38	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	25	29746	25	385	5prime_fragment	FALSE	canonical	2	285	junction_30	80.0710878459795	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATCAAGACTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	38079073	37997848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.192	chr15	-	4719	33	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	3937	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_12	114.794772719623	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGTAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	38079071	38002811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013810_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.193	chr15	-	4777	32	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-423	35365	6	2847	5prime_fragment	FALSE	canonical	2	222	junction_24	78.3059316948954	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACCCCTTTTTAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	38079092	38003901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.194	chr15	-	3818	22	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	27	45103	27	-3537	5prime_fragment	FALSE	canonical	3	285	junction_14	65.0231774480621	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTGATATTTAAGT	NA	False	NA	NA	False	AATAAA	-32	NA	38079071	38013205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.195	chr15	-	3827	22	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-402	44678	27	-3546	5prime_fragment	FALSE	canonical	3	222	junction_14	76.7352547381442	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATTTATTTGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	38079071	38013214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.196	chr15	-	4375	21	ISM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-394	45491	35	-4359	5prime_fragment	FALSE	canonical	3	222	junction_13	78.4578071322415	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTAAAGTTTATGTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	38079063	38014027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.197	chr15	-	3200	21	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	-5528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	133.839558800827	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAAGAAGAGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	38079071	38015196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021802_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.199	chr15	-	2587	18	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	5	-9892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	139.829753134273	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGACTGTTTTCAGAGGA	NA	False	NA	NA	False	NA	NA	NA	38079093	38019560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048395_38078607
ES.11780.2	chr15	-	5764	24	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	78884	-1680	157	1149	3prime_fragment	FALSE	canonical	0	0	junction_21	195.04684135192	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAAAATTTTAATCTTC	9458	False	NA	NA	False	AATAAA	-20	NA	38000214	37966422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136
ES.11780.200	chr15	-	1928	13	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	27	60829	27	-19263	5prime_fragment	FALSE	canonical	3	285	junction_5	80.5153539532816	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAATCCAGTGCTGGTA	NA	False	NA	NA	False	AATAAA	-3	NA	38079071	38028931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.201	chr15	-	2046	1	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	2	-67382	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTACTTGGAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	38079096	38077050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38077000_38079100
ES.11780.21	chr15	-	9203	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.640456370472	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079091	37968102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997963_37998190_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.22	chr15	-	9296	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-465	-434	-36	0	multi-exon	FALSE	canonical	0	0	junction_21	178.88035064093	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079134	37968102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.24	chr15	-	9189	58	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	199.285048673521	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079123	37968102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.28	chr15	-	9262	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	-20	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_21	176.45579964147	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079118	37968102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.29	chr15	-	9207	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	254.035444641813	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079071	37968102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997965_37998218_37998530_37998663_38000136_38000249_38000822_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004786_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013805_38015181_38015393_38018522_38018721_38019131_38019285_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.3	chr15	-	5421	25	ISM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	78255	-1273	-472	742	3prime_fragment	FALSE	canonical	0	0	junction_21	191.308065803998	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTGTGCACTTGACAG	8829	False	NA	NA	False	AATAAA	-11	NA	38000843	37966829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813
ES.11780.30	chr15	-	9240	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.830205200584	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTATGGTGTTATT	NA	False	NA	-6	True	AATAAA	-30	NA	38079109	37968103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984202_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.32	chr15	-	9248	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	208.505802649247	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTATGGTGTTATT	NA	False	NA	-6	True	AATAAA	-30	NA	38079103	37968103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004789_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.34	chr15	-	9147	58	NIC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	194.244290952293	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTATGGTGTTATT	NA	False	NA	-6	True	AATAAA	-30	NA	38079071	37968103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.35	chr15	-	4576	27	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-1360	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	296.480312067744	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTATGGTGTTATT	6773	False	NA	-6	True	AATAAA	-30	NA	38002899	37968103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976307_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800
ES.11780.38	chr15	-	10754	58	NIC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_21	180.25567321295	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	NA	False	NA	-7	True	AATAAA	-29	NA	38079071	37968104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.40	chr15	-	6021	8	NIC	ENSMUSG00000037487.8	novel	2279	12	NA	NA	-1698	-2	intron_retention	FALSE	canonical	3	825	junction_6	60.3770465914162	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	3248	False	NA	-7	True	AATAAA	-29	NA	37981763	37968104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37976480_37978265_37980165_37981063_37981209_37981709
ES.11780.42	chr15	-	5069	31	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	3581	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.417435423165	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	3505	False	NA	-7	True	AATAAA	-29	NA	38006167	37968104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111
ES.11780.44	chr15	-	7765	51	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-22822	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	197.207606344177	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTTTTATGGTGTTAT	NA	False	NA	-7	True	AATAAA	-29	NA	38038119	37968104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004586_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059
ES.11780.47	chr15	-	9256	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	195.38371421087	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079091	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002727_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.48	chr15	-	9248	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	189.880774909264	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079097	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.5	chr15	-	8456	46	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-13697	720	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	197.372113306594	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAATAAAACAAACAT	8923	False	NA	NA	False	AATATA	-33	NA	38028994	37966851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876
ES.11780.50	chr15	-	9177	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	196.692106552408	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079071	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.51	chr15	-	9329	58	NIC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	9	-5	intron_retention	FALSE	canonical	0	0	junction_20	178.93065453421	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079089	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.52	chr15	-	9205	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	187.680590004526	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079072	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.56	chr15	-	9087	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	195.00132930429	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079074	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996867_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.58	chr15	-	9160	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.462416397619	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	NA	False	NA	-10	True	AATAAA	-26	NA	38079097	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996917_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.6	chr15	-	9792	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	-428	-967	1	2	multi-exon	FALSE	canonical	0	0	junction_21	178.88035064093	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAGAAACAGTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	38079097	37967569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.60	chr15	-	8134	39	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-3972	-5	intron_retention	FALSE	canonical	0	0	junction_20	214.743227459243	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTTTTTATGGTGT	2972	False	NA	-10	True	AATAAA	-26	NA	38019269	37968107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131
ES.11780.61	chr15	-	9202	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	213.503045727871	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	38079084	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989855_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028872_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.63	chr15	-	12078	55	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	-5	-6	intron_retention	FALSE	non_canonical	0	0	junction_27	181.172705007627	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	38079103	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37998223_37998530_37998663_38000136_38000249_38000813_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004786_38004933_38006111_38006204_38006698_38006848_38008193_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.64	chr15	-	7751	51	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-22792	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	199.321518155968	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	38038089	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000932_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059
ES.11780.65	chr15	-	9651	33	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	2925	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	229.845022515172	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	2849	False	NA	-11	True	AATAAA	-25	NA	38006823	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37992524_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698
ES.11780.66	chr15	-	10097	58	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-6	intron_retention	FALSE	canonical	0	0	junction_5	194.999440458194	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	38079071	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975436_37975622_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.7	chr15	-	6453	38	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	1575	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	213.417775319907	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAGAAACAGTTTTTA	8519	False	NA	NA	False	AATAAA	-23	NA	38013722	37967569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685
ES.11780.72	chr15	-	9238	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.773370546283	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	38079076	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.74	chr15	-	1081	5	NNC	ENSMUSG00000037487.8	novel	3562	7	NA	NA	170	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	423.976045903539	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	False	NA	-11	True	AATAAA	-25	NA	37973432	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973337
ES.11780.75	chr15	-	7474	48	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-14588	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	235.304418376236	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	8032	False	NA	-11	True	AATAAA	-25	NA	38029885	37968108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978271_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004786_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009453_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742
ES.11780.80	chr15	-	9259	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	197.634372326403	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGCTTTTTTATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	38079110	37968109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004411_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.82	chr15	-	3206	20	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	3506	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.107144768574	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	7827	False	NA	-13	True	AATAAA	-23	NA	37996865	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968762_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798
ES.11780.83	chr15	-	9194	59	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	25	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	197.464941423934	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079073	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984402_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.85	chr15	-	9423	60	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	224.735783453065	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079083	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004781_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38077368_38077569_38078607
ES.11780.89	chr15	-	8862	58	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	178.806323843982	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079071	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996917_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.9	chr15	-	9772	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	1	-531	1	0	multi-exon	FALSE	canonical	0	0	junction_21	176.45579964147	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGAAGAAACAGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	38079097	37967571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.92	chr15	-	8803	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	608	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	195.58418546205	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	790	False	NA	-13	True	AATAAA	-23	NA	38078061	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078001
ES.11780.94	chr15	-	8907	55	NNC	ENSMUSG00000037487.8	novel	8397	59	NA	NA	27	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	217.664413678873	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079071	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38078607
ES.11780.96	chr15	-	9089	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	192.858210193399	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079097	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37996867_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11780.97	chr15	-	9168	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	194.547397701531	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTAGCTTTTTTATGG	NA	False	NA	-13	True	AATAAA	-23	NA	38079083	37968110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ES.11781.1	chr15	+	4305	1	FSM	ENSMUSG00000115771.2	ENSMUST00000228698.2	462	1	-42	-3801	-42	3801	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTGTCTCAAAAAA	194	False	NA	NA	False	NA	NA	NA	38079303	38083608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38079300_38083600
ES.11781.2	chr15	+	577	3	Genic_Genomic	ENSMUSG00000115771.2	novel	462	1	NA	NA	-14	33474	multi-exon	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTGCTTTTGTTTCA	222	False	NA	NA	False	AATAAA	-18	NA	38079331	38113281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_38079488_38079665_38079746_38112940
ES.11781.3	chr15	+	205	1	Intergenic	novelGene_9822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCCTCCCTTTCAAAAA	6212	False	NA	NA	False	AAAACA	-4	NA	38094197	38094402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38094200_38094400
ES.11782.1	chr15	-	7933	2	Intergenic	novelGene_9821	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGGCTGATGAGA	NA	False	NA	NA	False	NA	NA	NA	38096226	38088206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38093700_38093786
ES.11783.1	chr15	-	118	1	Intergenic	novelGene_9823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCAATGCCCTGT	NA	False	NA	NA	False	NA	NA	NA	38111403	38111285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38111300_38111400
ES.11784.1	chr15	-	180	1	Intergenic	novelGene_9824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAATAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	38114805	38114625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38114600_38114800
ES.11785.1	chr15	-	3144	1	Intergenic	novelGene_9825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	38198001	38194857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38194900_38198000
ES.11786.1	chr15	-	157	1	Intergenic	novelGene_9826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	7478	False	NA	NA	False	NA	NA	NA	38247824	38247667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38247700_38247800
ES.11787.1	chr15	-	3475	1	Intergenic	novelGene_9827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACTCAAAAAACAAA	9343	False	NA	NA	False	NA	NA	NA	38290348	38286873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38286900_38290300
ES.11788.1	chr15	-	3763	1	Genic_Genomic	ENSMUSG00000037465.11	novel	NA	NA	NA	NA	3615	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1876	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACAGAGCTCAGAG	5236	False	NA	NA	False	AATAAA	-22	NA	38295468	38291705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_38291700_38295500
ES.11788.10	chr15	-	3585	2	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2313	junction_1	0	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300948	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38298097_38300802
ES.11788.11	chr15	-	2918	4	FSM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1	-2	1	-1	multi-exon	FALSE	canonical	0	0	junction_3	1037.5311508041	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	1379	False	NA	-8	True	AATAAA	-17	NA	38299325	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38299302
ES.11788.12	chr15	-	3903	4	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	22	junction_3	1027.25275478931	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300948	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38296409_38296858_38297772_38297865_38298097_38299940
ES.11788.13	chr15	-	3922	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1037.5311508041	1879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	1400	False	NA	-8	True	AATAAA	-17	NA	38299304	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296409_38296858_38297772_38297865_38298097_38298277
ES.11788.14	chr15	-	3140	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	2013	junction_1	150	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300953	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38296409_38296858_38298097_38300802
ES.11788.15	chr15	-	2237	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.18343429212	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300954	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296183_38297442_38297772_38297865_38298097_38300802
ES.11788.18	chr15	-	5758	3	ISM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-10	2	-10	1	intron_retention	FALSE	canonical	3	2013	junction_1	168.5	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTGAGTCTGTTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	38300960	38294658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38296409_38296858_38297772_38297865
ES.11788.19	chr15	-	2996	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-238	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1037.5311508041	1879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTGAGTCTGTTGTA	427	False	NA	-9	True	AATAAA	-16	NA	38300277	38294658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296409_38296858_38297772_38297865_38298094_38300172
ES.11788.2	chr15	-	3481	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-429	-8	-429	8	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTTGTATGTGTTAAAA	NA	False	NA	1	True	AATAAA	-26	NA	38301379	38294648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
ES.11788.20	chr15	-	2808	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1006.5	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGAGTCTGTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	38300948	38294659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38296409_38296858_38297772_38300802
ES.11788.21	chr15	-	1637	2	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGAGTCTGTTG	NA	False	NA	-11	True	AATAAA	-14	NA	38300952	38294660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296217_38300871
ES.11788.22	chr15	-	3133	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	383	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	1033.79333847083	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGAGTCTGTTG	137	False	NA	-11	True	AATAAA	-14	NA	38300567	38294660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296409_38296858_38297772_38297865_38298097_38300326
ES.11788.23	chr15	-	3095	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1037.5311508041	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGAGTCTGTTG	NA	False	NA	-11	True	AATAAA	-14	NA	38300984	38294660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296409_38296858_38297772_38297865_38298118_38300802
ES.11788.24	chr15	-	2500	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	-1	545	-1	-542	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGGACAGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	38300951	38295201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
ES.11788.25	chr15	-	347	1	NIC	ENSMUSG00000037465.11	novel	2144	5	NA	NA	0	-486	mono-exon	FALSE	NA	NA	NA	NA	NA	1751	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCGGAAGAAGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	38300950	38300603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38300600_38301000
ES.11788.3	chr15	-	3081	4	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	255	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	1037.06391102745	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	9	True	NA	-7	True	AATAAA	-18	NA	38300695	38294656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38296409_38296858_38297772_38297865_38298097_38300510
ES.11788.4	chr15	-	6157	2	ISM	ENSMUSG00000037465.11	ENSMUST00000228772.2	530	3	-868	-2915	43	0	intron_retention	FALSE	canonical	3	2350	junction_1	0	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300907	38294656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38297772_38297865
ES.11788.5	chr15	-	3523	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	2313	junction_2	18.5	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300980	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38297772_38297865_38298097_38300802
ES.11788.7	chr15	-	2623	4	NNC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1099.18343429212	1884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300955	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38296409_38297283_38297772_38297865_38298097_38300802
ES.11788.8	chr15	-	6293	1	NIC	ENSMUSG00000037465.11	novel	2144	5	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1884	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGTCTGTTGTAT	NA	False	NA	-8	True	AATAAA	-17	NA	38300950	38294657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38294700_38301000
ES.11789.1	chr15	+	345	1	Intergenic	novelGene_9828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACTTTAAAATATTAG	4778	False	NA	NA	False	TTTAAA	-10	NA	38326983	38327328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38327000_38327300
ES.1179.1	chr1	-	6832	37	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118536738	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389019_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399569_118425362_118425515_118427375_118427449_118429028_118429125_118430582_118430728_118431548_118431685_118432624_118432695_118433206_118433270_118434667_118434748_118436544_118436713_118437301_118437350_118437933_118438103_118439900_118439956_118449558_118449665_118453026_118453183_118466992_118467099_118470830_118471074_118473119_118473187_118475592_118475757_118478814_118478894_118479740_118479885_118487713_118487859_118488739_118488846_118498576_118498730_118506550_118506797_118509003_118509193_118518146_118518285_118528111_118528313_118530092_118530210_118534635
ES.1179.10	chr1	-	6853	37	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118536738	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389020_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399569_118425362_118425515_118427375_118427449_118429028_118429125_118430582_118430728_118431548_118431685_118432624_118432695_118433206_118433270_118434667_118434748_118436544_118436713_118437301_118437350_118437933_118438103_118449552_118449665_118453026_118453183_118466992_118467099_118470830_118471074_118473119_118473185_118474608_118474680_118475592_118475757_118478814_118478894_118479740_118479885_118487713_118487859_118488740_118488846_118498576_118498730_118506550_118506797_118509001_118509193_118518146_118518285_118528111_118528313_118530092_118530207_118534633
ES.1179.11	chr1	-	4637	15	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118436113	118317159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389019_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399569_118425362_118425515_118427375_118427449_118429028_118429125_118430582_118430697_118431546_118431685_118432624_118432695_118433206
ES.1179.15	chr1	-	2759	1	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118344331	118341572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118341600_118344300
ES.1179.16	chr1	-	6665	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAACTATAAACCCA	NA	False	NA	NA	False	NA	NA	NA	118355238	118348573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118348600_118355200
ES.1179.17	chr1	-	169	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGCTGGGCATGG	NA	False	NA	NA	False	NA	NA	NA	118362502	118362333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118362300_118362500
ES.1179.18	chr1	-	2089	1	FSM	ENSMUSG00000107722.2	ENSMUST00000203191.2	616	1	-1460	-13	-1460	13	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAACAAACAAAGGTCT	418	False	NA	NA	False	NA	NA	NA	118388457	118386368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118386400_118388500
ES.1179.19	chr1	-	703	4	Antisense	novelGene_ENSMUSG00000064302.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAATTGTTTTGGAGT	6144	False	NA	NA	False	NA	NA	NA	118453121	118445716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118446089_118446916_118446963_118447149_118447318_118453004
ES.1179.20	chr1	-	292	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	118492606	118492314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118492300_118492600
ES.1179.21	chr1	-	4979	1	Antisense	novelGene_ENSMUSG00000064302.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118502613	118497634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118497600_118502600
ES.1179.5	chr1	-	3647	30	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118498602	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389018_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399569_118425362_118425515_118427375_118427449_118429028_118429140_118430611_118430728_118431548_118431685_118432624_118432695_118433206_118433270_118434667_118434748_118436544_118436713_118437301_118437350_118437933_118438103_118449552_118449665_118453026_118453183_118466992_118467099_118470830_118471074_118473119_118473187_118475592_118475757_118478814_118478894_118479740_118479885_118487713_118487859_118488739_118488846_118498576
ES.1179.6	chr1	-	1943	17	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118436587	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389019_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399569_118425362_118425515_118427375_118427449_118429028_118429125_118430582_118430697_118431546_118431685_118432624_118432695_118433206_118433270_118434667_118434748_118436544
ES.1179.8	chr1	-	5430	36	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118535386	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389019_118390193_118390288_118392257_118392332_118395607_118395706_118399499_118399570_118425364_118425515_118427375_118427449_118429028_118429125_118430582_118430728_118431548_118431685_118432624_118432695_118433206_118433270_118434667_118434748_118436544_118436713_118437301_118437350_118437933_118438103_118449552_118449665_118453026_118453183_118466992_118467099_118470830_118471074_118473119_118473187_118475592_118475757_118478814_118478894_118479740_118479885_118487713_118487859_118488739_118488846_118498576_118498730_118506550_118506797_118509003_118509193_118518146_118518285_118528111_118528313_118530092_118530210_118534635
ES.1179.9	chr1	-	6774	36	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGCGCCTGCGCAGA	NA	False	NA	NA	False	NA	NA	NA	118536740	118317132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118317252_118347169_118347647_118387528_118387607_118388913_118389019_118390193_118390286_118392256_118392332_118395607_118395706_118399499_118399567_118425363_118425515_118427375_118427449_118429028_118429123_118430582_118430728_118431548_118431687_118432628_118432695_118433206_118433270_118434667_118434747_118436544_118436713_118437302_118437352_118437934_118438103_118449552_118449665_118453026_118453181_118466991_118467097_118470829_118471074_118473119_118473187_118475592_118475757_118478814_118478894_118479740_118479885_118487713_118487859_118488739_118488846_118498576_118498730_118506550_118506797_118509003_118509193_118518146_118518285_118528111_118528313_118530092_118530210_118534635
ES.11790.1	chr15	+	174	1	Intergenic	novelGene_9830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	38355430	38355604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38355400_38355600
ES.11791.1	chr15	-	4386	3	Intergenic	novelGene_9829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTTGGAAGCTATGG	NA	False	NA	NA	False	NA	NA	NA	38366250	38354099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38358314_38358399_38358471_38366149
ES.11791.2	chr15	-	233	2	Intergenic	novelGene_9831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCGAGTATTGCGGCT	NA	False	NA	NA	False	NA	NA	NA	38366280	38358368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38358471_38366149
ES.11792.1	chr15	-	1154	3	NNC	ENSMUSG00000115405.2	novel	686	2	NA	NA	22	-3136	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTACGCTCTGCTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	38404376	38389013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38389947_38404038_38404231_38404347
ES.11792.2	chr15	-	1804	1	Intergenic	novelGene_9832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTGCTACGCTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	38390821	38389017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38389000_38390800
ES.11793.1	chr15	-	4042	5	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-116	1264	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.11247489949718	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTGTTCGTGATTCT	NA	False	NA	NA	False	NA	NA	NA	38455494	38435204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38445370_38445501_38453402_38453648_38454915_38455060_38455380
ES.11793.2	chr15	-	3950	5	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-125	1262	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	3.34477204006491	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTGTTCGTGATT	NA	False	NA	NA	False	NA	NA	NA	38455503	38435206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38445370_38445501_38453402_38453648_38455014_38455060_38455380
ES.11793.3	chr15	-	4330	7	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-119	1262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.70782512765993	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTGTTCGTGATT	NA	False	NA	NA	False	NA	NA	NA	38455497	38435206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38443764_38443926_38445370_38445501_38451200_38451327_38453402_38453648_38454915_38455060_38455380
ES.11793.4	chr15	-	4218	5	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-1970	1261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGGTCTGTTCGTGAT	NA	False	NA	NA	False	NA	NA	NA	38457348	38435207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38445370_38445501_38453402_38453648_38454915_38455060_38457055
ES.11793.5	chr15	-	7777	1	Genic_Genomic	ENSMUSG00000115009.2	novel	NA	NA	NA	NA	12390	1257	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAAGACGGTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	38442988	38435211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_38435200_38443000
ES.11793.6	chr15	-	2714	5	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-113	-61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.11247489949718	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCTGACGAGACATC	NA	False	NA	NA	False	NA	NA	NA	38455491	38436529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38445370_38445501_38453402_38453648_38454915_38455060_38455380
ES.11793.7	chr15	-	1734	6	NNC	ENSMUSG00000115009.2	novel	2819	5	NA	NA	-113	-1103	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.99332590941915	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAAGGCCGAACAGTG	NA	False	NA	NA	False	NA	NA	NA	38455491	38437571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38438614_38443764_38443926_38445370_38445501_38453402_38453648_38455014_38455060_38455380
ES.11794.1	chr15	+	4550	3	Intergenic	novelGene_9833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGTTGTCATAGATTC	234	False	NA	NA	False	NA	NA	NA	38470974	38477968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38474465_38474946_38475735_38477696
ES.11794.2	chr15	+	3810	2	Intergenic	novelGene_9834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTTCCTAAAGTGTCA	1436	False	NA	NA	False	NA	NA	NA	38472176	38477948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_38475735_38477696
ES.11795.1	chr15	+	5297	2	Antisense	novelGene_ENSMUSG00000037458.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAAAAAAACTAAAT	7822	False	NA	NA	False	NA	NA	NA	38478562	38488247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_38479032_38483419
ES.11796.1	chr15	+	4092	1	Antisense	novelGene_ENSMUSG00000037458.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	38510980	38515072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_38511000_38515100
ES.11797.1	chr15	-	4996	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	2	-127	-1	127	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTATGTTTTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	38519508	38487543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.11	chr15	-	4335	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	1	162	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	182.856425159802	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAACCTGGGTGATGT	NA	False	NA	-81	True	AATGAA	-33	NA	38519509	38488319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38510352_38510467_38514716_38514854_38519152
ES.11797.12	chr15	-	3956	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.944696405324	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTCATGGGACCGCCTT	NA	False	NA	88	True	AGTAAA	-44	NA	38519510	38488337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.13	chr15	-	4089	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.193660160774	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTAATGAATGGATATT	NA	False	NA	74	True	AGTAAA	-30	NA	38519507	38488351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491872_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716_38514854_38519152
ES.11797.15	chr15	-	4339	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	1	128	combination_of_known_junctions	FALSE	canonical	2	46	junction_7	133.945283018758	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTTAATGAATGGATA	NA	False	NA	72	True	AGTAAA	-28	NA	38519509	38488353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.18	chr15	-	4186	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	685	0	126	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCTTTTAATGAATGGA	NA	False	NA	70	True	AGTAAA	-26	NA	38519510	38488355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.19	chr15	-	4493	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	124	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	195.929036898567	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCTTTTAATGAATG	NA	False	NA	68	True	AGTAAA	-24	NA	38519507	38488357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.2	chr15	-	5027	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	0	-810	0	-1	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGGTGGTTGGTGTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	38519507	38487671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.21	chr15	-	4258	12	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	-1	122	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	198.583288103631	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAGCTTTTAATGAA	NA	False	NA	66	True	AGTAAA	-22	NA	38519508	38488359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.23	chr15	-	4336	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-116	0	116	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCACAATGAAGCTTTT	NA	False	NA	60	True	AGTAAA	-16	NA	38519510	38488365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.24	chr15	-	4097	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	145.774024145945	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501827_38514716_38514854_38519152
ES.11797.25	chr15	-	4819	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	1	55	intron_retention	FALSE	canonical	3	46	junction_6	138.743252088165	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519509	38488426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.27	chr15	-	4242	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	173.208669112015	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519507	38488426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501827_38507442_38507591_38514716_38514854_38519152
ES.11797.29	chr15	-	5571	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	intron_retention	FALSE	canonical	2	359	junction_2	62.6202044072039	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.3	chr15	-	4867	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGGTGGTTGGTGTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	38519510	38487671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.32	chr15	-	3978	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	-1	55	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	145.044131215296	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519508	38488426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.37	chr15	-	5778	10	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	54	intron_retention	FALSE	canonical	3	407	junction_8	44.4266631096882	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	-2	True	AATAGA	-20	NA	38519507	38488427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.40	chr15	-	4318	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	205.111131801492	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	-2	True	AATAGA	-20	NA	38519507	38488427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507641_38514716_38514854_38519152
ES.11797.41	chr15	-	2342	3	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	256.5	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	-2	True	AATAGA	-20	NA	38519507	38488427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490322_38514760_38514854_38519152
ES.11797.42	chr15	-	5941	11	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	54	intron_retention	FALSE	canonical	0	0	junction_8	189.236915003389	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTATATTGCCCAC	NA	False	NA	-2	True	AATAGA	-20	NA	38519510	38488427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.45	chr15	-	3864	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	15	52	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	143.876381741898	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGTATATTGCCC	813	False	NA	-4	True	AATAGA	-18	NA	38518450	38488429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38518340
ES.11797.46	chr15	-	4013	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.224348427053	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGTATATTGCCC	NA	False	NA	-4	True	AATAGA	-18	NA	38519507	38488429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.48	chr15	-	3782	11	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	186.692501188452	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGTATATTGCCC	NA	False	NA	-4	True	AATAGA	-18	NA	38519507	38488429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491871_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.49	chr15	-	3913	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.671824039254	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGTATATTGCCC	NA	False	NA	-4	True	AATAGA	-18	NA	38519507	38488429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38488822_38488886_38490685_38491815_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.5	chr15	-	4349	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	522	0	289	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAACTCCATCCTCAG	NA	False	NA	46	True	ACTAAA	-16	NA	38519510	38488192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.50	chr15	-	4178	11	NIC	ENSMUSG00000037458.16	novel	4109	12	NA	NA	0	51	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	196.36662139987	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTTGTGTATATTGCC	NA	False	NA	-5	True	AATAGA	-17	NA	38519510	38488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.52	chr15	-	4016	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.370782321414	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGATTTTGTGTATAT	NA	False	NA	-9	True	AATAGA	-13	NA	38519507	38488434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.53	chr15	-	3816	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	14	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	144.40307453058	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTGATTTTGTGTATA	812	False	NA	-10	True	AATAGA	-12	NA	38518451	38488435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38518383
ES.11797.54	chr15	-	3950	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	1	7	combination_of_known_splicesites	FALSE	canonical	1	35	junction_2	141.648896924755	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGATGGCTTCTATCAT	NA	False	NA	-1	True	GATAAA	-23	NA	38519509	38488474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.55	chr15	-	3549	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.174568926543	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGATGGCTTCTATCAT	793	False	NA	-1	True	GATAAA	-23	NA	38518470	38488474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492486_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38518383
ES.11797.56	chr15	-	4222	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTACTTTGATGGCTTCT	NA	False	NA	-6	True	GATAAA	-18	NA	38519510	38488479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.57	chr15	-	4061	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	810	0	1	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTACTTTGATGGCTTC	NA	False	NA	-7	True	GATAAA	-17	NA	38519510	38488480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.58	chr15	-	3975	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.370782321414	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTACTTTGATGGCTTC	NA	False	NA	-7	True	GATAAA	-17	NA	38519510	38488480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491872_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.6	chr15	-	4258	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.370782321414	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAACTCCATCCTCAG	NA	False	NA	46	True	ACTAAA	-16	NA	38519507	38488192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.60	chr15	-	3813	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.944696405324	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTACTTTGATGGCTTC	NA	False	NA	-7	True	GATAAA	-17	NA	38519510	38488480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.63	chr15	-	4212	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	46	junction_7	133.945283018758	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTACTTTGATGGCTT	NA	False	NA	-8	True	GATAAA	-16	NA	38519510	38488481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.68	chr15	-	5172	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	1	intron_retention	FALSE	canonical	2	359	junction_2	56.7705029042372	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	-10	True	GATAAA	-14	NA	38519510	38488483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.7	chr15	-	4250	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.224348427053	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAACTCCATCCTCAG	NA	False	NA	46	True	ACTAAA	-16	NA	38519507	38488192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.71	chr15	-	5325	11	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	1	intron_retention	FALSE	canonical	2	359	junction_2	62.4262765187865	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	-10	True	GATAAA	-14	NA	38519507	38488483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.72	chr15	-	4364	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	212.318680813117	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	-10	True	GATAAA	-14	NA	38519507	38488483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.75	chr15	-	3974	11	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	187.964491327485	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTTACTTTGATGGC	NA	False	NA	-10	True	GATAAA	-14	NA	38519509	38488483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492488_38492604_38493717_38493881_38494535_38494611_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.78	chr15	-	4007	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	-47	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACTTGTGTGTGACTCT	NA	False	NA	-58	True	TATAAA	-40	NA	38519510	38488531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.79	chr15	-	3924	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	144.40307453058	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTAAAGGTAACTTGT	NA	False	NA	-68	True	TATAAA	-30	NA	38519510	38488541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519228
ES.11797.8	chr15	-	4465	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	271	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	180.875053901767	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTGGCCTGTTGAA	NA	False	NA	28	True	NA	NA	NA	38519510	38488210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501827_38514716_38514854_38519152
ES.11797.80	chr15	-	6317	9	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	-59	intron_retention	FALSE	canonical	3	407	junction_7	46.3788745012209	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAACTGTAAAGGTAACTT	NA	False	NA	-70	True	TATAAA	-28	NA	38519507	38488543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.82	chr15	-	3873	12	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	-178	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCAATTTGGTATGC	NA	False	NA	NA	False	CATAAA	-17	NA	38519507	38488662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.83	chr15	-	3942	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.019048607124	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTTCAATTTGGTATG	NA	False	NA	NA	False	CATAAA	-16	NA	38519510	38488663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.85	chr15	-	2845	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	2	2024	-1	-1210	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGACTGATAGAAAAG	NA	False	NA	0	True	AGTAAA	-16	NA	38519508	38489694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.87	chr15	-	3960	11	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	1	-1210	intron_retention	FALSE	canonical	2	359	junction_2	56.7705029042372	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGACTGATAGAAAAG	NA	False	NA	0	True	AGTAAA	-16	NA	38519509	38489694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.88	chr15	-	2996	12	FSM	ENSMUSG00000037458.16	ENSMUST00000129589.8	4109	12	-97	1210	0	-1210	multi-exon	FALSE	canonical	2	46	junction_7	170.115711713824	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGACTGATAGAAAAG	NA	False	NA	0	True	AGTAAA	-16	NA	38519510	38489694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.89	chr15	-	2596	12	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	-1213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.944696405324	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTTGACTGATAGAA	NA	False	NA	-3	True	AGTAAA	-13	NA	38519510	38489697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490624_38491874_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.9	chr15	-	4561	12	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	271	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	208.618002757145	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTGGCCTGTTGAA	NA	False	NA	28	True	NA	NA	NA	38519510	38488210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.90	chr15	-	3000	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	1	-1215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	205.316557756282	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTTTGACTGATAG	NA	False	NA	-5	True	AGTAAA	-11	NA	38519509	38489699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492488_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.91	chr15	-	2680	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	2191	0	-1377	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAGTTCAGATTTATT	NA	False	NA	NA	False	AGTAAA	-16	NA	38519510	38489861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.92	chr15	-	2812	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	-1554	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	195.929036898567	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTTTCAGGCTAAAA	NA	False	NA	-7	True	AATAAA	-17	NA	38519507	38490038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.94	chr15	-	2503	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	2368	0	-1554	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTTTCAGGCTAAAA	NA	False	NA	-7	True	AATAAA	-17	NA	38519510	38490038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.95	chr15	-	2652	12	NIC	ENSMUSG00000037458.16	novel	4109	12	NA	NA	1	-1556	combination_of_known_junctions	FALSE	canonical	2	46	junction_7	133.945283018758	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTTTTTCAGGCTAA	NA	False	NA	-9	True	AATAAA	-15	NA	38519509	38490040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ES.11797.97	chr15	-	3297	12	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	1616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	214.376667041684	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTGTATTTGACCTA	NA	False	NA	1	True	AATAAA	-19	NA	38519510	38490101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38492483_38493452_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11797.98	chr15	-	2548	13	NNC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	1613	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	182.856425159802	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTTGTTGTATTTGAC	NA	False	NA	-2	True	AATAAA	-16	NA	38519507	38490104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38510352_38510467_38514716_38514854_38519152
ES.11797.99	chr15	-	2591	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	-3	1629	0	1607	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATAGTATTTGTTGTA	NA	False	NA	-8	True	AATAAA	-10	NA	38519510	38490110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ES.11798.1	chr15	+	723	3	Antisense	novelGene_ENSMUSG00000102106.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGGTTTGCGTTTTC	NA	False	NA	NA	False	NA	NA	NA	38560676	38565990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_38560778_38565280_38565784_38565871
ES.11799.1	chr15	-	1532	4	Intergenic	novelGene_9835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.816496580927726	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAGTCTCACTAAGTT	NA	False	NA	NA	False	NA	NA	NA	38633583	38621860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38622614_38623084_38623464_38630105_38630198_38633275
ES.118.1	chr1	+	156	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	13421532	13421688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13421500_13421700
ES.1180.1	chr1	+	2178	1	Genic_Genomic	ENSMUSG00000064302.14	novel	NA	NA	NA	NA	5799	25	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAGATGGCTCAGCGG	NA	False	NA	NA	False	NA	NA	NA	118538255	118540433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_118538300_118540400
ES.11800.1	chr15	+	2082	13	NNC	ENSMUSG00000022295.9	novel	569	3	NA	NA	-17038	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	418.765513808809	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	730	False	NA	28	True	AATAAA	-14	NA	38645138	38692687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38645304_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.11	chr15	+	4134	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1269	junction_11	111.811381907062	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGCTAGTCATTTA	180	False	NA	27	True	AATAAA	-13	NA	38662172	38692686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.13	chr15	+	2150	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	3050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	404.308599694568	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTACTAATTTTTTAAAAA	184	False	NA	NA	False	NA	NA	NA	38662176	38695740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855_38692693_38695663
ES.11800.14	chr15	+	1727	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-245	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	420.781759652434	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	185	False	NA	6	True	AATAAA	-16	NA	38662177	38692442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.15	chr15	+	3376	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1269	junction_11	97.5659132997612	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGCTAGTCATTTA	185	False	NA	27	True	AATAAA	-13	NA	38662177	38692686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
ES.11800.16	chr15	+	3665	12	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	5	-560	intron_retention	FALSE	canonical	3	24	junction_3	421.923184423088	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTCTGTAAATGTGTA	189	False	NA	25	True	AATATA	-21	NA	38662181	38692127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38675061_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
ES.11800.17	chr15	+	3939	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	417.569122687756	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGCTAGTCATTTA	195	False	NA	27	True	AATAAA	-13	NA	38662187	38692686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38689237_38689368_38689467_38690776_38690904_38691855
ES.11800.18	chr15	+	1261	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	-564	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	440.245715481707	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATCAGGTCTGTAAATG	195	False	NA	21	True	AATATA	-17	NA	38662187	38692123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.19	chr15	+	1874	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	-247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	539.822784859304	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGTGTGTGACTTG	195	False	NA	4	True	AATAAA	-14	NA	38662187	38692440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38665271_38665336_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.2	chr15	+	1903	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-80	248	-80	-245	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	104	False	NA	6	True	AATAAA	-16	NA	38662096	38692442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.20	chr15	+	1957	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	129	junction_8	403.492951590819	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	196	False	NA	22	True	AATAAA	-8	NA	38662188	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.21	chr15	+	3134	10	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	0	intron_retention	FALSE	canonical	2	20	junction_1	448.89282176495	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	196	False	NA	28	True	AATAAA	-14	NA	38662188	38692687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
ES.11800.22	chr15	+	1818	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	440.245715481707	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	196	False	NA	22	True	AATAAA	-8	NA	38662188	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.23	chr15	+	1982	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	423.164544125519	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	196	False	NA	22	True	AATAAA	-8	NA	38662188	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.24	chr15	+	4665	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	1	-716	intron_retention	FALSE	canonical	3	1269	junction_10	99.1132685365587	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCCTTGTGTTGGTGT	196	False	NA	14	True	AGTAAA	-20	NA	38662188	38691971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38690904_38691855
ES.11800.25	chr15	+	1235	12	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	4	-720	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	565.364155300965	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATCCTGGCCTTGTGTTG	199	False	NA	10	True	AGTAAA	-16	NA	38662191	38691967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662325_38673100_38673265_38674140_38674209_38676271_38676358_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.26	chr15	+	3754	11	ISM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	16	563	5	-560	intron_retention	FALSE	canonical	3	1356	junction_8	82.5617950386255	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTCTGTAAATGTGTA	200	False	NA	25	True	AATATA	-21	NA	38662192	38692127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368
ES.11800.27	chr15	+	2022	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	419.834358871316	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAACTATGCAGTGCTA	200	False	NA	19	True	AATAAA	-5	NA	38662192	38692678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673121_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.28	chr15	+	5376	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	1269	junction_10	99.1132685365587	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	201	False	NA	28	True	AATAAA	-14	NA	38662193	38692687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38690904_38691855
ES.11800.29	chr15	+	8292	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	17	-6238	6	6238	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTAATTCTTTTAGT	201	False	NA	NA	False	NA	NA	NA	38662193	38698928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.3	chr15	+	2004	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	-77	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	404.308599694568	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	107	False	NA	22	True	AATAAA	-8	NA	38662099	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855_38692410_38692544
ES.11800.30	chr15	+	1710	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	9	-245	combination_of_known_splicesites	FALSE	canonical	3	129	junction_8	403.492951590819	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	204	False	NA	6	True	AATAAA	-16	NA	38662196	38692442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.32	chr15	+	5485	10	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	10	-6	intron_retention	FALSE	canonical	3	1269	junction_9	101.400318990416	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	205	False	NA	22	True	AATAAA	-8	NA	38662197	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38690904_38691855
ES.11800.33	chr15	+	1952	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	420.781759652434	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	205	False	NA	28	True	AATAAA	-14	NA	38662197	38692687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.34	chr15	+	4905	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	21	-2855	10	2855	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAGTTAAAAAATCCTTA	205	False	NA	NA	False	AAAACA	-29	NA	38662197	38695545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.35	chr15	+	5127	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	10	-245	intron_retention	FALSE	canonical	3	1269	junction_10	99.1132685365587	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	205	False	NA	6	True	AATAAA	-16	NA	38662197	38692442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38690904_38691855
ES.11800.36	chr15	+	6617	12	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-6	intron_retention	FALSE	non_canonical	0	0	junction_8	574.075555830113	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	206	False	NA	22	True	AATAAA	-8	NA	38662198	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683855_38684462_38686003_38686040_38687354_38689368_38690904_38691855
ES.11800.37	chr15	+	2178	13	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	2	41	junction_1	408.887948179775	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	206	False	NA	22	True	AATAAA	-8	NA	38662198	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662466_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.38	chr15	+	2227	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	531.293408947008	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	206	False	NA	22	True	AATAAA	-8	NA	38662198	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38674873_38675061_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.39	chr15	+	2892	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	413.523905999802	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	206	False	NA	22	True	AATAAA	-8	NA	38662198	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38675061_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.4	chr15	+	1431	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-74	714	-74	-711	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTGTTGGTGTTGCTC	110	False	NA	19	True	AGTAAA	-25	NA	38662102	38691976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.41	chr15	+	3051	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	626.138527501145	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	206	False	NA	22	True	AATAAA	-8	NA	38662198	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38675061_38676271_38676358_38677762_38677858_38679563_38679656_38681057_38681217_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.42	chr15	+	3361	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	420.382365630783	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTGTGTGTGACTTGA	206	False	NA	5	True	AATAAA	-15	NA	38662198	38692441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38681217_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.43	chr15	+	2794	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	13	-560	intron_retention	FALSE	canonical	3	1269	junction_11	97.5659132997612	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTCTGTAAATGTGTA	208	False	NA	25	True	AATATA	-21	NA	38662200	38692127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
ES.11800.44	chr15	+	5312	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_8	562.852235394769	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	208	False	NA	28	True	AATAAA	-14	NA	38662200	38692687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683855_38684462_38686003_38686039_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.45	chr15	+	4627	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	-15	-560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	627.778331209428	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTCTGTAAATGTGTA	212	False	NA	25	True	AATATA	-21	NA	38662204	38692127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683855_38684464_38686003_38686040_38687141_38687259_38687354_38689367_38689467_38690776_38690904_38691855
ES.11800.46	chr15	+	4287	11	ISM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	37	9	-6	-6	intron_retention	FALSE	canonical	3	1356	junction_8	82.5617950386255	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	221	False	NA	22	True	AATAAA	-8	NA	38662213	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368
ES.11800.47	chr15	+	6346	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	38	-4313	-5	4313	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAAGTAATTAATTTTTT	222	False	NA	NA	False	ATTAAA	-28	NA	38662214	38697003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.48	chr15	+	4036	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1269	junction_11	110.378911628225	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGCTAGTCATTTA	230	False	NA	27	True	AATAAA	-13	NA	38662222	38692686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38689467_38690776_38690904_38691855
ES.11800.49	chr15	+	1144	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	3	-717	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	567.417315562365	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCTTGTGTTGGTG	230	False	NA	13	True	AGTAAA	-19	NA	38662222	38691970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.5	chr15	+	1649	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-57	479	-57	-476	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATGGTATGCATAATT	127	False	NA	109	True	TATAAA	-37	NA	38662119	38692211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.50	chr15	+	1981	13	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	561.963373658225	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	231	False	NA	22	True	AATAAA	-8	NA	38662223	38692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38662328_38673100_38673265_38674140_38674201_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690878_38691855
ES.11800.51	chr15	+	1412	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	63	596	8	-593	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATATATATATTG	247	False	NA	-8	True	NA	NA	NA	38662239	38692094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.52	chr15	+	6503	3	NIC	ENSMUSG00000022295.9	novel	4927	10	NA	NA	8621	-560	intron_retention	FALSE	canonical	3	1269	junction_2	51.5	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTCTGTAAATGTGTA	NA	False	NA	25	True	AATATA	-21	NA	38684553	38692127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38687141_38687259_38690904_38691855
ES.11800.53	chr15	+	2830	3	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	11418	-245	intron_retention	FALSE	canonical	3	1269	junction_2	186.5	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTGTGACTTGAG	884	False	NA	6	True	AATAAA	-16	NA	38687350	38692442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38689467_38690776_38690904_38691855
ES.11800.6	chr15	+	2137	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	-51	-15	-51	15	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCTAAGTCTTTACG	133	False	NA	46	True	AATAAA	-32	NA	38662125	38692705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11800.7	chr15	+	3160	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	-28	-246	intron_retention	FALSE	canonical	3	1269	junction_11	97.5659132997612	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTGTGTGTGACTTGA	156	False	NA	5	True	AATAAA	-15	NA	38662148	38692441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
ES.11800.9	chr15	+	1385	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	-5	-593	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	420.781759652434	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATATATATATTG	179	False	NA	-8	True	NA	NA	NA	38662171	38692094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ES.11801.1	chr15	-	162	1	Intergenic	novelGene_9836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGATTTAGAAAAA	5397	False	NA	NA	False	NA	NA	NA	38704397	38704235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38704200_38704400
ES.11802.1	chr15	-	172	1	Intergenic	novelGene_9837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	3896	False	NA	NA	False	NA	NA	NA	38705898	38705726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_38705700_38705900
ES.11803.1	chr15	+	1629	2	Genic_Genomic	ENSMUSG00000115070.2	novel	1774	1	NA	NA	-61	1711	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATGAAAAATGAAAG	NA	False	NA	NA	False	NA	NA	NA	38853567	38857113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_38854899_38856815
ES.11804.1	chr15	+	4261	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	68	-4	68	4	multi-exon	FALSE	canonical	2	8	junction_1	5.64702478203247	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	False	NA	NA	False	AATAAA	-18	NA	38869496	38901587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ES.11804.3	chr15	+	4138	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	-51	-6	2	4	multi-exon	FALSE	canonical	2	5	junction_1	6.28269227499025	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	False	NA	NA	False	AATAAA	-18	NA	38869676	38901587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ES.11804.4	chr15	+	3650	6	NNC	ENSMUSG00000022297.16	novel	4325	7	NA	NA	17	-4418	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	4.17612260356422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTTCAAGCTTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	38869691	38897163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38869828_38870619_38870959_38873087_38873227_38889060_38889258_38894209_38896050_38896164
ES.11804.5	chr15	+	4202	8	NNC	ENSMUSG00000022297.16	novel	4325	7	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.18094504365255	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTGTGTGCTAGGT	NA	False	NA	NA	False	AATAAA	-18	NA	38869693	38901587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38869828_38870619_38870959_38875503_38875642_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ES.11804.6	chr15	+	4234	8	NNC	ENSMUSG00000022297.16	novel	4081	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.31809839642742	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTGTATTGTGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	38869714	38901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38869885_38870619_38870959_38875503_38875642_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ES.11804.7	chr15	+	913	2	NNC	ENSMUSG00000022297.16	novel	647	2	NA	NA	-7	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTCATTGCTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	38869720	38871207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38870046_38870619
ES.11804.8	chr15	+	3687	6	NNC	ENSMUSG00000022297.16	novel	4081	7	NA	NA	4	-4418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.65513337649941	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTTCAAGCTTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	38869731	38897163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38869885_38870619_38870959_38873067_38873227_38889060_38889258_38894209_38896050_38896164
ES.11805.1	chr15	+	1236	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	-73	3	-73	-3	multi-exon	FALSE	canonical	3	14	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATTTGTTTATTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	38940253	38950513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
ES.11806.1	chr15	-	5937	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-31	-1	-31	1	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAATTTGGCCTTTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	38976142	38954624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.10	chr15	-	4218	6	NIC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	4	686	intron_retention	FALSE	canonical	3	83	junction_2	11.9431989014669	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTTGAGTTCTAT	NA	False	NA	-7	True	ATTAAA	-14	NA	38976064	38957676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.11	chr15	-	2381	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-27	3551	-27	186	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTGCTATAATATCC	NA	False	NA	NA	False	AATAAA	-31	NA	38976138	38958176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.13	chr15	-	3759	6	NIC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	1	181	intron_retention	FALSE	canonical	3	83	junction_2	11.9431989014669	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTGTTTGCTATAA	NA	False	NA	NA	False	AATAAA	-26	NA	38976110	38958181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.14	chr15	-	2271	7	FSM	ENSMUSG00000022299.10	ENSMUST00000227323.2	979	7	-12	-1280	-12	179	multi-exon	FALSE	canonical	2	3	junction_3	37.5307281511504	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGGTGTTTGCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	38976080	38958183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38959504_38960914_38961061_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.15	chr15	-	1268	2	ISM	ENSMUSG00000022299.10	ENSMUST00000227323.2	979	7	6700	4874	6659	4713	internal_fragment	FALSE	canonical	3	112	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38969368	38964337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_38965464_38969226
ES.11806.16	chr15	-	3234	1	Genic_Genomic	ENSMUSG00000022299.10	novel	NA	NA	NA	NA	6930	3187	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	38969097	38965863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_38965900_38969100
ES.11806.3	chr15	-	7223	6	NIC	ENSMUSG00000022299.10	novel	979	7	NA	NA	3	-2	intron_retention	FALSE	canonical	2	3	junction_2	40.4207867315816	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCAATTTGGCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	38976065	38954627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_38961061_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.4	chr15	-	2415	7	NNC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	35.1267546022813	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTCTCAATTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	38976081	38954632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38956051_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.5	chr15	-	1480	7	NNC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	-21	-993	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	35.1267546022813	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCAACTAAAGAGTATG	NA	False	NA	NA	False	NA	NA	NA	38976132	38955618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38956051_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.6	chr15	-	4882	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	30	993	-13	-993	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCAACTAAAGAGTATG	NA	False	NA	NA	False	NA	NA	NA	38976081	38955618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.8	chr15	-	2951	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	-6	2960	-6	777	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTCTGTTGACATATGA	NA	False	NA	84	True	AATAAA	-12	NA	38976117	38957585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11806.9	chr15	-	2690	7	NNC	ENSMUSG00000022299.10	novel	979	7	NA	NA	23	686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.0954644209988	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTTGAGTTCTAT	NA	False	NA	-7	True	ATTAAA	-14	NA	38976004	38957676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_38959499_38960914_38961054_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ES.11807.1	chr15	+	1616	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	-67	2	-67	1	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGCAGTTGTGTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	38976192	39010249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ES.11807.10	chr15	+	2439	6	ISM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	13393	3	820	0	3prime_fragment	FALSE	canonical	3	730	junction_1	43.1907397482377	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38989652	39010248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ES.11807.11	chr15	+	3559	5	NIC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	1032	0	intron_retention	FALSE	canonical	3	730	junction_1	25.4595267041632	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38989864	39010248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38991363_38993610_38993694_39001478_39001644_39007017_39008650_39010067
ES.11807.12	chr15	+	4927	2	FSM	ENSMUSG00000022300.11	ENSMUST00000227219.2	480	2	-4447	0	-4447	0	multi-exon	FALSE	canonical	3	771	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	4460	False	NA	NA	False	AATAAA	-27	NA	39003906	39010251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_39008650_39010067
ES.11807.3	chr15	+	1529	11	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	242.714564869931	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38976271	39010248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38976447_38982105_38982306_38982739_38982841_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ES.11807.7	chr15	+	1638	12	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	301.023241188346	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38976304	39010248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38976447_38979983_38980119_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ES.11807.8	chr15	+	4105	8	NNC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	343.041736022107	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTGCAGTTGTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	38976332	39010247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_38976447_38982105_38982220_38988210_38991363_38993610_38993694_39001478_39001644_39007017_39007151_39008485_39008650_39010067
ES.11807.9	chr15	+	9241	10	NIC	ENSMUSG00000022300.11	novel	1551	11	NA	NA	92	0	intron_retention	FALSE	canonical	2	478	junction_2	101.49110524792	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCAGTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	38976351	39010248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_39001644_39007017_39007154_39008485_39008650_39010067
ES.11808.1	chr15	+	181	1	Intergenic	novelGene_9838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	39045852	39046033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_39045900_39046000
ES.11809.1	chr15	+	5993	27	NIC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	-569	43	combination_of_known_junctions	FALSE	canonical	2	6	junction_20	12.048717675883	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTATTTTTAAAAATA	NA	False	NA	100	True	NA	NA	NA	39061086	39545892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.10	chr15	+	5357	26	NIC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-192	-45	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.3903846098609	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTAGCTGAATATTTAAA	NA	False	NA	12	True	ATTAAA	-23	NA	39061463	39545804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.11	chr15	+	4698	4	NNC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-192	-17028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.34209919681348	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTGTGGAAGTGTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	39061463	39283913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39280207
ES.11809.12	chr15	+	5644	29	NIC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-192	-49	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.5367979211918	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39061463	39545800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39138370_39138404_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.13	chr15	+	5495	27	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-192	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7323958988654	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTATTTTTAAAAATAAAT	NA	False	NA	103	True	NA	NA	NA	39061463	39545895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39545074
ES.11809.14	chr15	+	5522	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-180	39	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTATATTATTTTTAAA	NA	False	NA	96	True	NA	NA	NA	39061475	39545888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.15	chr15	+	7206	25	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-161	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_16	12.0439011767598	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGAGGGTGCTGTCT	NA	False	NA	7	True	AATAAA	-17	NA	39061494	39547771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.17	chr15	+	5324	26	NNC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-6	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.1407742751441	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATATTATTTTTAAAAAT	NA	False	NA	99	True	NA	NA	NA	39061649	39545891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479691_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.18	chr15	+	5324	27	NNC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	3	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.4508501171227	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTAGCTGAATATTT	NA	False	NA	9	True	ATTAAA	-20	NA	39061658	39545801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473465_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.19	chr15	+	5311	27	NNC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	4	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.800471514984	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTAGCTGAATATTT	NA	False	NA	9	True	ATTAAA	-20	NA	39061659	39545801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39305552_39305613_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.2	chr15	+	2380	2	ISM	ENSMUSG00000037386.17	ENSMUST00000042917.10	4719	27	-609	388069	-507	54680	5prime_fragment	FALSE	canonical	2	11	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAATTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	39061148	39157091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_39061934_39155496
ES.11809.20	chr15	+	7282	27	NIC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_20	12.048717675883	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTGAGGGTGCTG	NA	False	NA	4	True	AATAAA	-14	NA	39061673	39547768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.21	chr15	+	4092	22	NNC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	31	945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.26132151090708	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATCTAATTTCTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	39061686	39480751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39480427
ES.11809.22	chr15	+	5116	25	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-25	39	combination_of_known_junctions	FALSE	canonical	1	4	junction_16	12.0439011767598	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTATATTATTTTTAAA	NA	False	NA	96	True	NA	NA	NA	39061701	39545888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.24	chr15	+	7137	26	NNC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	14.5708750595151	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATGTTGTTGAGGGTGC	NA	False	NA	2	True	AATAAA	-12	NA	39061716	39547766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39371001_39371075_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479691_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.25	chr15	+	5326	26	FSM	ENSMUSG00000037386.17	ENSMUST00000227243.2	4760	26	-8	-558	-2	-49	multi-exon	FALSE	canonical	0	0	junction_5	13.0509156766872	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39061724	39545800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315619_39315829_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.26	chr15	+	7007	26	NNC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	11.4887074991054	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTTGTTGAGGGTGCT	NA	False	NA	3	True	AATAAA	-13	NA	39061736	39547767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39545074
ES.11809.27	chr15	+	5256	27	NIC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-12	-44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.5401131521937	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGCTGAATATTTAAAT	NA	False	NA	13	True	ATTAAA	-24	NA	39061745	39545805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.28	chr15	+	5226	28	NNC	ENSMUSG00000037386.17	novel	4581	24	NA	NA	39603	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1647782153568	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACACAGATTAGCTGAAT	NA	False	NA	5	True	ATTAAA	-16	NA	39101360	39545797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39101494_39138370_39138404_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.29	chr15	+	3119	20	NNC	ENSMUSG00000037386.17	novel	4581	24	NA	NA	457	1262	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_19	6.86756397152929	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGTTGTCTTGGC	NA	False	NA	NA	False	ATTAAA	-30	NA	39301090	39481068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39480427
ES.11809.3	chr15	+	5855	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-494	39	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.5984705022293	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTATATTATTTTTAAA	NA	False	NA	96	True	NA	NA	NA	39061161	39545888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.30	chr15	+	6014	1	NIC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	30082	18856	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAGAAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	39330715	39336729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39330700_39336700
ES.11809.31	chr15	+	3453	7	NIC	ENSMUSG00000037386.17	novel	4581	24	NA	NA	-49230	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.1717384593979	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTGAGGGTGCTGT	7409	False	NA	5	True	AATAAA	-15	NA	39399350	39547769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39399378_39430338_39430440_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.32	chr15	+	4708	8	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	20332	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.3890727036392	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	7338	False	NA	57	True	TTTAAA	-26	NA	39470434	39545849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39470523_39470564_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.33	chr15	+	1460	6	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-12101	-49	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	16.4608626748418	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39510860	39545800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39510965_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.34	chr15	+	3431	6	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-12099	5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	16.4608626748418	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGAGGGTGCTGTCTGA	NA	False	NA	9	True	AATAAA	-19	NA	39510862	39547773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39510965_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.36	chr15	+	3766	6	FSM	ENSMUSG00000037386.17	ENSMUST00000226410.2	3685	6	-77	-4	-77	4	multi-exon	FALSE	canonical	3	7	junction_1	17.2348484182484	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGAGGGTGCTGTCTG	NA	False	NA	8	True	AATAAA	-18	NA	39522884	39547772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_39523323_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.37	chr15	+	1646	6	FSM	ENSMUSG00000037386.17	ENSMUST00000226410.2	3685	6	158	1881	158	38	multi-exon	FALSE	canonical	3	7	junction_1	17.2348484182484	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTATATTATTTTTAA	NA	False	NA	95	True	NA	NA	NA	39523119	39545887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_39523323_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.38	chr15	+	2603	4	NIC	ENSMUSG00000037386.17	novel	3685	6	NA	NA	15384	-49	intron_retention	FALSE	canonical	3	44	junction_1	2.62466929133727	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATTAGCTGAATATT	NA	False	NA	8	True	ATTAAA	-19	NA	39538345	39545800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39538478_39542643_39542757_39543025_39544525_39544941
ES.11809.5	chr15	+	5974	27	NNC	ENSMUSG00000037386.17	novel	4719	27	NA	NA	-443	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6142705887105	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTATTTTTAAAAATA	NA	False	NA	100	True	NA	NA	NA	39061212	39545892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39101308_39101494_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.6	chr15	+	6127	30	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-434	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5386442277461	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTATATTATTTTTA	NA	False	NA	94	True	NA	NA	NA	39061221	39545886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39101308_39101494_39138370_39138404_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.7	chr15	+	5809	28	NNC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-430	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.0353534266423	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATTAGCTGAATATTT	NA	False	NA	9	True	ATTAAA	-20	NA	39061225	39545801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39061934_39138370_39138408_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.8	chr15	+	7496	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	-274	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTGAGGGTGCTG	NA	False	NA	4	True	AATAAA	-14	NA	39061381	39547768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.11809.9	chr15	+	7524	27	NIC	ENSMUSG00000037386.17	novel	4800	27	NA	NA	-213	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.5401131521937	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTGAGGGTGCTGTC	NA	False	NA	6	True	AATAAA	-16	NA	39061442	39547770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_39061934_39138808_39138896_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ES.1181.1	chr1	-	5851	2	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGCAAACAACAATACA	NA	False	NA	NA	False	NA	NA	NA	118553895	118547904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118548782_118548921
ES.11810.1	chr15	-	2389	3	Intergenic	novelGene_9839	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCATGGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	39059611	39057112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39057262_39057306_39057355_39057419
ES.11810.2	chr15	-	4084	2	Intergenic	novelGene_9840	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCATGGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	39061281	39057112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39057369_39057453
ES.11810.3	chr15	-	4309	3	Intergenic	novelGene_9841	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTCATGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	39061534	39057114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39057252_39057297_39057355_39057419
ES.11810.4	chr15	-	3452	1	Intergenic	novelGene_9842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTGTTTTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	39061347	39057895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39057900_39061300
ES.11811.1	chr15	-	228	1	Intergenic	novelGene_9843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	39087314	39087086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39087100_39087300
ES.11812.1	chr15	-	1253	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_2	11	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	2128	False	NA	NA	False	NA	NA	NA	39110542	39105327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_39106174_39108258_39108441_39110317
ES.11812.2	chr15	-	1379	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	130.5	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	2128	False	NA	NA	False	NA	NA	NA	39110542	39105327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_39106174_39108183_39108492_39110317
ES.11812.3	chr15	-	5213	1	Intergenic	novelGene_9844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	2129	False	NA	NA	False	NA	NA	NA	39110541	39105328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39105300_39110500
ES.11812.4	chr15	-	1302	3	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	116	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	2129	False	NA	NA	False	NA	NA	NA	39110541	39105328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_39106174_39108258_39108492_39110317
ES.11812.5	chr15	-	3125	2	Antisense	novelGene_ENSMUSG00000037386.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAACAAGACCGTTTTCT	2129	False	NA	NA	False	NA	NA	NA	39110541	39105331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_39106174_39108258
ES.11812.6	chr15	-	397	1	Intergenic	novelGene_9845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	1812	False	NA	NA	False	NA	NA	NA	39110858	39110461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39110500_39110900
ES.11813.1	chr15	-	179	1	Intergenic	novelGene_9846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTTGAG	NA	False	NA	NA	False	NA	NA	NA	39162777	39162598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39162600_39162800
ES.11814.1	chr15	-	177	1	Intergenic	novelGene_9847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39539065	39538888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39538900_39539100
ES.11815.1	chr15	+	1885	3	ISM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	8156	0	8144	0	3prime_fragment	FALSE	canonical	3	10	junction_1	7	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	NA	False	NA	6	True	NA	NA	NA	39617483	39624330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_39618622_39622877_39623019_39623724
ES.11815.2	chr15	+	1965	3	ISM	ENSMUSG00000022303.10	ENSMUST00000022913.6	1997	4	8244	4	8232	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	NA	False	NA	6	True	NA	NA	NA	39617571	39624330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_39618622_39622709_39623019_39623724
ES.11815.3	chr15	+	6947	7	NNC	ENSMUSG00000022303.10	novel	1997	4	NA	NA	8279	28098	intron_retention	FALSE	canonical	0	0	junction_2	8.87724932372385	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGATGTTGAGTGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	39617618	39652432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39623019_39623724_39623958_39649647_39649769_39650409_39650577_39650647_39650866_39651398_39651536_39651761
ES.11815.5	chr15	+	2773	2	ISM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	11524	0	11512	0	3prime_fragment	FALSE	canonical	3	24	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	1167	False	NA	6	True	NA	NA	NA	39620851	39624330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_39623019_39623724
ES.11815.6	chr15	+	1222	3	Antisense	novelGene_ENSMUSG00000022304.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAGCAGCGTGTATGT	NA	False	NA	NA	False	TTTAAA	-24	NA	39631780	39633508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_39631887_39632314_39632382_39632459
ES.11815.7	chr15	+	190	1	Intergenic	novelGene_9850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGTGTAGGGATAAAA	NA	False	NA	NA	False	NA	NA	NA	39645360	39645550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_39645400_39645600
ES.11816.1	chr15	-	2528	2	NNC	ENSMUSG00000022304.14	novel	2466	10	NA	NA	8363	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGAGTTCAGCATT	NA	False	NA	NA	False	AATAAA	-10	NA	39648284	39632293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_39634502_39647964
ES.11816.2	chr15	-	2344	3	NNC	ENSMUSG00000022304.14	novel	2466	10	NA	NA	15932	-411	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGAGTTCAGCATT	NA	False	NA	NA	False	AATAAA	-10	NA	39640715	39632293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_39634502_39640454_39640539_39640663
ES.11816.3	chr15	-	1181	3	Intergenic	novelGene_9848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCTGAGTTCACTC	NA	False	NA	NA	False	TTTAAA	-14	NA	39640742	39633466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39634502_39640471_39640539_39640663
ES.11816.4	chr15	-	864	3	Intergenic	novelGene_9849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGTTCCATAAGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	39640731	39633789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_39634502_39640454_39640539_39640663
ES.11816.6	chr15	-	2209	10	FSM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	-100	1	-100	-1	multi-exon	FALSE	canonical	0	0	junction_5	67.0043300609265	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGTGTCTGAGTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	39720966	39646093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_39646506_39647964_39648111_39656622_39656831_39687561_39687705_39690259_39690402_39691370_39691528_39705318_39705509_39707253_39707434_39710004_39710164_39720494
ES.11816.8	chr15	-	626	2	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	72585	104	8366	-96	3prime_fragment	FALSE	canonical	3	216	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTTATTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	39648281	39646196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_39646506_39647964
ES.11817.1	chr15	+	2583	3	Antisense	novelGene_ENSMUSG00000022305.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCTTGCAATAAACTC	NA	False	NA	NA	False	AATAAA	-13	NA	39723401	39763999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_39723487_39728147_39728279_39761632
ES.11818.1	chr15	-	4243	8	NNC	ENSMUSG00000022305.14	novel	4109	7	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.0445807495419	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCTTTATTTTTGTTG	NA	False	NA	3	True	ATTAAA	-41	NA	39807374	39733979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999_39807124_39807184
ES.11818.10	chr15	-	4147	6	NIC	ENSMUSG00000022305.14	novel	4109	7	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	16.5456943039571	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGGTACTTTTTAAATC	NA	False	NA	-20	True	ATTAAA	-18	NA	39807376	39734002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39767934_39767992_39806999
ES.11818.11	chr15	-	4118	5	NIC	ENSMUSG00000022305.14	novel	4244	6	NA	NA	16	-1330	intron_retention	FALSE	canonical	3	14	junction_4	15.2807067899361	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAAGATGCAGGGT	NA	False	NA	NA	False	ATTAAA	-14	NA	39807374	39735328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_39736275_39739482_39739616_39741190_39743719_39748401_39748538_39806999
ES.11818.2	chr15	-	4335	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	-226	0	-20	0	multi-exon	FALSE	canonical	3	34	junction_6	6.95221787153807	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTGTTCTTTATTTT	NA	False	NA	-2	True	ATTAAA	-36	NA	39807410	39733984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
ES.11818.3	chr15	-	4112	7	NNC	ENSMUSG00000022305.14	novel	4109	7	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	19.2151560551098	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTGTTCTTTATTTT	NA	False	NA	-2	True	ATTAAA	-36	NA	39807336	39733984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999_39807184_39807275
ES.11818.6	chr15	-	3892	5	NIC	ENSMUSG00000022305.14	novel	4244	6	NA	NA	21	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	18.4712614620659	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAAGTTGTTCTTTAT	NA	False	NA	-5	True	ATTAAA	-33	NA	39807163	39733987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39806999
ES.11818.7	chr15	-	4266	6	FSM	ENSMUSG00000022305.14	ENSMUST00000110305.3	4244	6	-18	-4	-18	4	multi-exon	FALSE	canonical	3	14	junction_5	13.6733317081098	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTAAATCAAAGTTGT	NA	False	NA	-12	True	ATTAAA	-26	NA	39807408	39733994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999
ES.11819.1	chr15	+	513	3	Fusion	ENSMUSG00000094112.3_ENSMUSG00000115367.2	novel	2053	4	NA	NA	-13	-11	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACATGCAATTTGGG	NA	False	NA	NA	False	NA	NA	NA	39997747	40031104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_39997784_40028595_40028677_40030708
ES.11819.2	chr15	+	1693	3	NNC	ENSMUSG00000094112.3	novel	2053	4	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAGCTTCTTTCAGTG	NA	False	NA	NA	False	CATAAA	-13	NA	39997747	40013403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_39997784_40008211_40008366_40011900
ES.11819.3	chr15	+	495	4	NNC	ENSMUSG00000115367.2	novel	1064	3	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.78423336480244	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTCTGCCGTCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	40025970	40031471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_40026081_40026194_40026222_40028595_40028677_40031194
ES.11819.4	chr15	+	1568	4	NNC	ENSMUSG00000115367.2	novel	1064	3	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.12825877028341	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTCTGCCGTCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	40026017	40031471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_40026222_40028595_40028677_40029530_40030051_40030708
ES.11819.5	chr15	+	2145	1	NIC	ENSMUSG00000115367.2	novel	1064	3	NA	NA	3324	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTCTGCCGTCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	40029326	40031471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_40029300_40031500
ES.1182.1	chr1	+	9314	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	-39	17	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	483.03078555711	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTGTTTATTGAACT	NA	False	NA	36	True	AATAAA	-37	NA	118555635	118612915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597250_118603304_118603357_118605117
ES.1182.10	chr1	+	4329	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	4940	0	-4940	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATTGGTATTTTGCAC	NA	False	NA	20	True	NA	NA	NA	118555675	118607958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.11	chr1	+	2200	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	7069	0	-7069	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAAGGGCTTGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	118555675	118605829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.12	chr1	+	4606	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	4663	0	-4663	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTCCAGTCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	118555675	118608235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.13	chr1	+	9281	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	488.108808754435	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGCTGGAACCTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	118555675	118612896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605103
ES.1182.17	chr1	+	3986	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	5283	0	-5283	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCATCAGTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	118555675	118607615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.18	chr1	+	3683	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	5586	0	-5586	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCTTAAATGCTAACAAC	NA	False	NA	NA	False	NA	NA	NA	118555675	118607312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.2	chr1	+	9322	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	-36	-17	-35	17	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTGTTTATTGAACT	NA	False	NA	36	True	AATAAA	-37	NA	118555639	118612915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.23	chr1	+	9115	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_5	477.144253924591	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555676	118612898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.27	chr1	+	9114	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	477.537730471288	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGCTGGAACCTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	118555676	118612896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.30	chr1	+	7505	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	1	1763	1	-1763	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTTACCTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	118555676	118611135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.31	chr1	+	9293	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_13	479.279438962538	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555676	118612898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603279_118603357_118605117
ES.1182.32	chr1	+	4341	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-4947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	486.724207412815	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGTGCATTGGTAT	NA	False	NA	13	True	NA	NA	NA	118555676	118607951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584077_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.33	chr1	+	9221	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	489.153668313435	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCATGTGGCTGGAAC	NA	False	NA	11	True	AATAAA	-12	NA	118555676	118612890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580637_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.34	chr1	+	2786	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	NA	False	NA	12	True	AATAAA	-13	NA	118555676	118612891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118606073_118612547
ES.1182.36	chr1	+	4384	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-4946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	620.039296245721	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGCATTGGTATT	NA	False	NA	14	True	NA	NA	NA	118555676	118607952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580368_118580405_118580572_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.37	chr1	+	3969	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCTGGAACCTCAACT	NA	False	NA	18	True	AATAAA	-19	NA	118555676	118612897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118607226_118612523
ES.1182.4	chr1	+	3092	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	-1	6178	0	-6178	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTGTTCACCTTTCT	NA	False	NA	NA	False	NA	NA	NA	118555674	118606720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.41	chr1	+	6449	3	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1024	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555676	118612898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560035_118606668
ES.1182.42	chr1	+	5822	4	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	911.485722445625	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGCTTTGTTTAT	NA	False	NA	30	True	AATAAA	-31	NA	118555676	118612909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580073_118607437
ES.1182.43	chr1	+	4438	14	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-4663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	745.766600542829	1577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTCCAGTCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	118555676	118608235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580600_118580705_118581445_118581553_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597250_118603304_118603357_118605117
ES.1182.44	chr1	+	11714	14	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	1	-4	intron_retention	FALSE	canonical	1	14	junction_4	641.651096919124	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555676	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581479_118581553_118584097_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
ES.1182.45	chr1	+	477	3	FSM	ENSMUSG00000026380.11	ENSMUST00000190652.2	478	3	3	-2	2	2	multi-exon	FALSE	canonical	3	62	junction_2	993	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTTGTAATTTTATT	NA	False	NA	NA	False	NA	NA	NA	118555677	118565498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118565328
ES.1182.46	chr1	+	9117	13	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	523.892396447549	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	NA	False	NA	12	True	AATAAA	-13	NA	118555677	118612891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.5	chr1	+	11692	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1477	junction_7	204.098392561416	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGCTGGAACCTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	118555674	118612896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.50	chr1	+	9316	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	635.412291832826	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTTGTTTATTGAA	NA	False	NA	34	True	AATAAA	-35	NA	118555677	118612913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581431_118581553_118584077_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.51	chr1	+	9202	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	489.153668313435	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTATGTGGGCTCTGTGC	NA	False	NA	17	True	AATAAA	-28	NA	118555677	118612839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580102_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.53	chr1	+	6080	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	2	3187	2	-3187	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCAGACATAGTCAGAGG	NA	False	NA	NA	False	NA	NA	NA	118555677	118609711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.56	chr1	+	5633	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGCTGGAACCTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	118555677	118612896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118607061_118610692
ES.1182.57	chr1	+	7150	9	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	590.811888421348	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	NA	False	NA	12	True	AATAAA	-13	NA	118555677	118612891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589784_118606676
ES.1182.58	chr1	+	9040	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555677	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118612307_118612529
ES.1182.59	chr1	+	8021	4	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-59	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	704.278354061801	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTATGTGGGCTCTGTGC	NA	False	NA	17	True	AATAAA	-28	NA	118555677	118612839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118589709_118589802_118603304_118603357_118605117
ES.1182.60	chr1	+	9416	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	606.170346428204	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555677	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118565328_118565482_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.61	chr1	+	9089	14	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	637.978640365122	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555677	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592726_118593870_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.62	chr1	+	4215	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555677	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118606669_118611716
ES.1182.63	chr1	+	9273	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	455.756116530653	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTGTTTATTGAACT	NA	False	NA	36	True	AATAAA	-37	NA	118555677	118612915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596454_118597118_118597262_118603304_118603357_118605117
ES.1182.64	chr1	+	9196	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGTGGCTGGAACCT	NA	False	NA	13	True	AATAAA	-14	NA	118555677	118612892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118607277_118607341
ES.1182.65	chr1	+	4273	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	-4945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	472.572421257667	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCATTGGTATTT	NA	False	NA	15	True	NA	NA	NA	118555677	118607953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555743_118555791_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.66	chr1	+	7622	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	602.756276523844	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555677	118612898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120_118611080_118612721
ES.1182.67	chr1	+	9254	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	640.545717592843	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555678	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580600_118580705_118581445_118581553_118584097_118584251_118586743_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.68	chr1	+	9220	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	472.572421257666	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555678	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118609707_118609748
ES.1182.7	chr1	+	9205	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	487.096525865463	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTATGTGGGCTCTGTGC	NA	False	NA	17	True	AATAAA	-28	NA	118555674	118612839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592494_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.70	chr1	+	8829	16	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	705.626026226987	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118555680	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584077_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120_118612181_118612628
ES.1182.71	chr1	+	4445	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	6	-4666	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	477.537730471288	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTGCTCCAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	118555681	118608232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118555833_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.72	chr1	+	1680	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	6	3909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	488.108808754435	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCAGTGTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	118555681	118616807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118616609
ES.1182.74	chr1	+	1818	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	6	7445	6	-7445	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGGTCCTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	118555681	118605453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.75	chr1	+	2015	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	8	-7243	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_14	461.494135103247	1241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTTCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	118555683	118605655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
ES.1182.76	chr1	+	174	1	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1078	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTGAACCAG	NA	False	NA	NA	False	NA	NA	NA	118560330	118560504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_118560300_118560500
ES.1182.77	chr1	+	9018	14	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	22478	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	487.862127676767	2209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	8247	False	NA	12	True	AATAAA	-13	NA	118578153	118612891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118578219_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.79	chr1	+	8878	12	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	24921	-4	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_11	499.519967916306	2209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118580596	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
ES.1182.8	chr1	+	8091	8	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	631.478246268392	2225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGTGGCTGGAACC	NA	False	NA	12	True	AATAAA	-13	NA	118555675	118612891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586765_118605579
ES.1182.80	chr1	+	8770	11	ISM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	25769	8	25769	-8	3prime_fragment	FALSE	canonical	3	1477	junction_3	211.003056849895	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCATGTGGCTGGAAC	NA	False	NA	11	True	AATAAA	-12	NA	118581444	118612890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ES.1182.81	chr1	+	8053	12	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	25769	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	528.265992353933	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118581444	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117_118605216_118605936
ES.1182.82	chr1	+	3785	2	Genic_Genomic	ENSMUSG00000088363.3	novel	130	1	NA	NA	-14916	3214	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGGCTGGAACCTCA	NA	False	NA	15	True	AATAAA	-16	NA	118594634	118612894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_118594642_118609116
ES.1182.83	chr1	+	1745	1	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	48248	-7230	mono-exon	FALSE	NA	NA	NA	NA	NA	1222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTCTCAGTCGCCTT	6649	False	NA	NA	False	NA	NA	NA	118603923	118605668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_118603900_118605700
ES.1182.84	chr1	+	5733	2	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	51365	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCCATGTGGCTGGAA	9766	False	NA	10	True	AATAAA	-11	NA	118607040	118612889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118608236_118608351
ES.1182.85	chr1	+	2749	2	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	52828	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGTGGCTGGAACCT	NA	False	NA	13	True	AATAAA	-14	NA	118608503	118612892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118611077_118612716
ES.1182.9	chr1	+	5277	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	-3989	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_14	461.494135103247	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	118555675	118608909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
ES.11820.1	chr15	-	175	1	Intergenic	novelGene_9851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGACCAAC	NA	False	NA	NA	False	NA	NA	NA	40708352	40708177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_40708200_40708400
ES.11821.1	chr15	+	2268	1	Intergenic	novelGene_9852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAGACGAATCCTGAAG	NA	False	NA	NA	False	NA	NA	NA	40845195	40847463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_40845200_40847500
ES.11822.1	chr15	+	166	1	Intergenic	novelGene_9853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40949923	40950089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_40949900_40950100
ES.11823.1	chr15	-	174	1	Intergenic	novelGene_9854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTAGCAACTACC	NA	False	NA	NA	False	NA	NA	NA	41030035	41029861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_41029900_41030000
ES.11824.1	chr15	-	580	3	Antisense	novelGene_ENSMUSG00000048559.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATTACACCACC	NA	False	NA	NA	False	NA	NA	NA	41037207	41031694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_41031968_41032739_41032953_41037113
ES.11825.1	chr15	-	220	1	Intergenic	novelGene_9855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAACACTTGAG	NA	False	NA	NA	False	NA	NA	NA	41054264	41054044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_41054000_41054300
ES.11826.1	chr15	+	1600	4	Intergenic	novelGene_9856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_3	2.94392028877595	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGAAATCTTTGTCTTG	NA	False	NA	3	True	NA	NA	NA	41210817	41215809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41212202_41212325_41212702_41212780_41214473
ES.11826.10	chr15	+	1991	3	Intergenic	novelGene_9865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	46	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATCTTTGTCTTGCCT	NA	False	NA	6	True	NA	NA	NA	41210860	41215812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41211905_41213765_41214592_41215691
ES.11826.11	chr15	+	3299	1	Intergenic	novelGene_9866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCTTTGTCTTGCCTTA	NA	False	NA	8	True	NA	NA	NA	41212515	41215814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41212500_41215800
ES.11826.2	chr15	+	681	5	Intergenic	novelGene_9857	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_4	22.6315598225133	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAAGCATATTTTATAT	NA	False	NA	NA	False	AATAAA	-13	NA	41210828	41229906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809_41223059_41229728
ES.11826.3	chr15	+	294	3	Intergenic	novelGene_9858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	14.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGTCTTGCCTTAA	NA	False	NA	9	True	NA	NA	NA	41210830	41215815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41214473_41214592_41215691
ES.11826.4	chr15	+	3286	3	Intergenic	novelGene_9859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_2	2.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGCCTTAATTC	NA	False	NA	12	True	NA	NA	NA	41210834	41215818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41212202_41212325_41212702
ES.11826.5	chr15	+	661	4	Intergenic	novelGene_9860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	22.573337271116	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTCTGTTTACTGCG	NA	False	NA	NA	False	AATATA	-17	NA	41210836	41223224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809
ES.11826.6	chr15	+	1297	5	Intergenic	novelGene_9861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_4	22.6315598225133	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCCAGAATAAATCTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	41210839	41230533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41214473_41214592_41222277_41222360_41222809_41223059_41229728
ES.11826.7	chr15	+	399	5	Intergenic	novelGene_9862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_4	6.57647321898295	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTTTGTCTTGCCTT	NA	False	NA	7	True	NA	NA	NA	41210848	41215813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210883_41212202_41212325_41212702_41212780_41214473_41214518_41215691
ES.11826.8	chr15	+	134	1	Intergenic	novelGene_9863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGCTTTAAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	41210851	41210985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41210900_41211000
ES.11826.9	chr15	+	3106	2	Intergenic	novelGene_9864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGCCTTAATTC	NA	False	NA	12	True	NA	NA	NA	41210851	41215818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41211905_41213765
ES.11827.1	chr15	-	222	1	Intergenic	novelGene_9867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGCAGGTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	41263948	41263726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_41263700_41263900
ES.11828.1	chr15	+	2569	3	Intergenic	novelGene_9868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGCTGGCCCTCTCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	41276092	41301861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41276311_41294123_41294210_41299596
ES.11828.10	chr15	+	4765	17	NNC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	115.892444075315	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41310812	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41721450_41721633_41722553
ES.11828.11	chr15	+	4655	17	FSM	ENSMUSG00000022307.17	ENSMUST00000110297.10	4599	17	-56	0	-56	0	multi-exon	FALSE	canonical	3	6	junction_11	113.448208860916	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41310821	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.12	chr15	+	4696	17	NNC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-53	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.839904253838	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTGGATTTTTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	41310824	41724442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41398965_41399124_41516860_41517058_41517647_41517775_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.13	chr15	+	3704	17	NNC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-38	-804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	106.617581072495	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATATGTTATTAGT	NA	False	NA	19	True	AATAAA	-16	NA	41310839	41723637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714862_41714906_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.14	chr15	+	3189	11	ISM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-34	34016	-34	0	5prime_fragment	FALSE	canonical	3	24	junction_1	105.196768011189	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTAGTTTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	41310843	41690425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
ES.11828.15	chr15	+	4677	17	NNC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.479565418226	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41310868	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41398965_41399124_41440466_41440617_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.16	chr15	+	4000	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-9	524	-9	-524	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTGTTCCACACAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	41310868	41723917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.17	chr15	+	4571	16	NNC	ENSMUSG00000022307.17	novel	4515	16	NA	NA	-7	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	101.518996580279	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAAATGCATAA	NA	False	NA	NA	False	AAAAAG	-19	NA	41310870	41724417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41398965_41399124_41516860_41517131_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.18	chr15	+	4622	17	NNC	ENSMUSG00000022307.17	novel	4515	16	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.119200876839	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41310870	41724441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310986_41312413_41312514_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.19	chr15	+	1758	1	Intergenic	novelGene_9869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAAAAAGAATTTTA	3713	False	NA	NA	False	NA	NA	NA	41351158	41352916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41351200_41352900
ES.11828.2	chr15	+	4591	16	NNC	ENSMUSG00000022307.17	novel	684	4	NA	NA	-34743	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.4930259979172	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTTTTTCAATGACCA	NA	False	NA	NA	False	AATAAA	-26	NA	41276134	41724449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41276311_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.20	chr15	+	3411	1	Intergenic	novelGene_9871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTATCTCCTATGCC	NA	False	NA	NA	False	NA	NA	NA	41430183	41433594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41430200_41433600
ES.11828.21	chr15	+	176	1	Intergenic	novelGene_9872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACTTCA	7768	False	NA	NA	False	NA	NA	NA	41455297	41455473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41455300_41455500
ES.11828.22	chr15	+	180	1	Intergenic	novelGene_9873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	41645407	41645587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41645400_41645600
ES.11828.23	chr15	+	397	1	Intergenic	novelGene_9874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAACATATTAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	41645411	41645808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41645400_41645800
ES.11828.24	chr15	+	3334	14	NNC	ENSMUSG00000022307.17	novel	684	4	NA	NA	-225	-804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.866370132639	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATATGTTATTAGT	NA	False	NA	19	True	AATAAA	-16	NA	41652111	41723637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652198_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.25	chr15	+	4567	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-217	-4	-217	3	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGATTTTTTCAATGAC	NA	False	NA	NA	False	AATAAA	-24	NA	41652119	41724447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.26	chr15	+	3742	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-200	804	-200	-802	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTATATGTTATTAGTTA	NA	False	NA	21	True	AATAAA	-18	NA	41652136	41723639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.27	chr15	+	3881	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-42	507	-42	-505	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTATATCTTGTAAATT	NA	False	NA	NA	False	NA	NA	NA	41652294	41723936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.28	chr15	+	3017	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	-32	34017	-32	1	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGTTTCATTTATAA	NA	False	NA	NA	False	NA	NA	NA	41652304	41690426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
ES.11828.29	chr15	+	3434	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	-802	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	76.7901179984913	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTATATGTTATTAGTTA	NA	False	NA	21	True	AATAAA	-18	NA	41652336	41723639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.3	chr15	+	4667	17	NNC	ENSMUSG00000022307.17	novel	684	4	NA	NA	-34738	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.233104385758	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41276139	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41276311_41294123_41294210_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.30	chr15	+	2704	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	1642	0	97	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTTTGGCCATTTACT	NA	False	NA	NA	False	AATACA	-29	NA	41652336	41722801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.31	chr15	+	4430	15	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	93.88912805723	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATTTTTTCAATGA	NA	False	NA	NA	False	AATAAA	-23	NA	41652336	41724446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.32	chr15	+	4221	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	125	0	-123	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGTATTATTGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	41652336	41724318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.33	chr15	+	4244	14	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.866370132639	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41652336	41724441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652529_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.34	chr15	+	3695	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	651	0	-649	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCTTGTAGGAAACCA	NA	False	NA	NA	False	AATAAA	-13	NA	41652336	41723792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.35	chr15	+	3113	9	ISM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	1	33888	1	130	5prime_fragment	FALSE	canonical	3	180	junction_7	41.0662574384372	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGCAACCATGTGGAT	NA	False	NA	NA	False	NA	NA	NA	41652337	41690555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285
ES.11828.36	chr15	+	4199	14	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	78.013653789031	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41652337	41724441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689365_41713914_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.37	chr15	+	4448	14	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.262175655247	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652337	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41714083_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.39	chr15	+	3634	15	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	1	-805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.9730922072969	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTATATGTTATTAG	NA	False	NA	18	True	AATAAA	-15	NA	41652337	41723636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41660953_41662301_41662398_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.4	chr15	+	4553	16	NNC	ENSMUSG00000022307.17	novel	684	4	NA	NA	-683	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.4930259979172	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41310194	41724441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310341_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.40	chr15	+	3639	14	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	1	-806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.262175655247	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGGTATATGTTATTA	NA	False	NA	17	True	AATAAA	-14	NA	41652337	41723635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41714083_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.41	chr15	+	4238	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	76.7901179984913	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652337	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.42	chr15	+	7071	16	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.096096156169	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652339	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41663469_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41701647_41701676_41712065_41712147_41713854_41714083_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.43	chr15	+	4187	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	77.8803837090359	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41652340	41724441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41716717_41716814_41718316_41718391_41722553
ES.11828.45	chr15	+	4272	14	NNC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	78.0991631833583	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAATGAGTTTGGATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	41652343	41724438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680601_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.47	chr15	+	4196	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	79.9535889681563	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652361	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.48	chr15	+	4642	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	27	-323	27	322	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAGAAAAAAATTAAAGA	NA	False	NA	NA	False	NA	NA	NA	41652363	41724766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.49	chr15	+	3387	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	27	-804	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	79.9535889681563	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATATGTTATTAGT	NA	False	NA	19	True	AATAAA	-16	NA	41652363	41723637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.5	chr15	+	688	4	NNC	ENSMUSG00000022307.17	novel	4515	16	NA	NA	-678	-120793	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4419672692682	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	41310199	41544293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41310341_41398965_41399124_41516860_41517058_41544101
ES.11828.50	chr15	+	4050	14	NIC	ENSMUSG00000022307.17	novel	2818	9	NA	NA	5	-123	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	77.6299063947903	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGTATTATTGTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	41652781	41724318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41652903_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.51	chr15	+	3249	13	ISM	ENSMUSG00000022307.17	ENSMUST00000090095.13	4158	14	7958	806	7958	-804	3prime_fragment	FALSE	canonical	3	180	junction_6	37.3060726364429	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATATGTTATTAGT	NA	False	NA	19	True	AATAAA	-16	NA	41660868	41723637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.52	chr15	+	3506	13	ISM	ENSMUSG00000022307.17	ENSMUST00000090095.13	4158	14	7958	549	7958	-547	3prime_fragment	FALSE	canonical	3	180	junction_6	37.3060726364429	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTGACATTGTGCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	41660868	41723894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.53	chr15	+	2440	1	Intergenic	novelGene_9875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	41666880	41669320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41666900_41669300
ES.11828.54	chr15	+	2812	8	NNC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-10500	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	100.729988644122	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41683827	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718384_41722553
ES.11828.55	chr15	+	3888	5	ISM	ENSMUSG00000022307.17	ENSMUST00000166917.3	798	6	17979	-1740	-1313	0	3prime_fragment	FALSE	canonical	3	253	junction_3	21.9544984001001	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	1649	False	NA	NA	False	AATAAA	-21	NA	41712306	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.56	chr15	+	5913	3	NIC	ENSMUSG00000022307.17	novel	4599	17	NA	NA	-41	0	intron_retention	FALSE	canonical	3	255	junction_2	16	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	2921	False	NA	NA	False	AATAAA	-21	NA	41713578	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_41713981_41714770_41718391_41722553
ES.11828.6	chr15	+	4924	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-406	-3	-406	0	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41310471	41724444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.7	chr15	+	3908	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	-197	804	-197	-804	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTATATGTTATTAGT	NA	False	NA	19	True	AATAAA	-16	NA	41310680	41723637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11828.9	chr15	+	3860	17	FSM	ENSMUSG00000022307.17	ENSMUST00000110297.10	4599	17	-66	805	-66	-802	multi-exon	FALSE	canonical	3	6	junction_11	113.448208860916	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTATATGTTATTAGTTA	NA	False	NA	21	True	AATAAA	-18	NA	41310811	41723639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ES.11829.1	chr15	-	6575	1	Intergenic	novelGene_9870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCGGACAATATCACTTA	NA	False	NA	NA	False	NA	NA	NA	41408395	41401820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_41401800_41408400
ES.1183.1	chr1	-	3672	15	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGGGCTGCGGCCGG	NA	False	NA	NA	False	NA	NA	NA	118607303	118555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118555832_118559970_118560122_118580028_118580106_118580596_118580703_118581443_118581550_118584094_118584249_118586735_118586847_118589707_118589800_118592486_118592538_118592627_118592725_118593849_118593935_118596358_118596464_118597117_118597260_118603302_118603356_118605115
ES.1183.2	chr1	-	3677	15	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGGGCTGCGGCCGG	NA	False	NA	NA	False	NA	NA	NA	118607305	118555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118555833_118559970_118560122_118580028_118580106_118580596_118580703_118581443_118581550_118584094_118584249_118586735_118586847_118589707_118589800_118592486_118592538_118592630_118592717_118593840_118593935_118596358_118596464_118597117_118597267_118603304_118603355_118605115
ES.1183.3	chr1	-	4106	15	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGGGCTGCGGC	NA	False	NA	NA	False	NA	NA	NA	118607740	118555680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118555832_118559970_118560122_118580028_118580106_118580596_118580703_118581443_118581550_118584094_118584249_118586735_118586847_118589707_118589800_118592486_118592538_118592627_118592717_118593840_118593935_118596358_118596464_118597117_118597260_118603302_118603355_118605115
ES.1183.5	chr1	-	6949	1	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAACCCACATTTTATT	NA	False	NA	NA	False	NA	NA	NA	118607303	118600354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118600400_118607300
ES.1183.6	chr1	-	5625	2	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAACCCACATTTTATT	NA	False	NA	NA	False	NA	NA	NA	118607740	118600354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118603355_118605115
ES.1183.7	chr1	-	703	1	Antisense	novelGene_ENSMUSG00000026380.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	118607301	118606598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_118606600_118607300
ES.11830.1	chr15	-	1905	2	FSM	ENSMUSG00000042895.7	ENSMUST00000054742.7	2979	2	157	917	157	-917	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAAATACAGAAACTC	NA	False	NA	NA	False	AATAAA	-3	NA	41732959	41728388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_41729749_41732414
ES.11831.1	chr15	+	6106	1	Intergenic	novelGene_9876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCGTAAGTTCTGT	2373	False	NA	NA	False	NA	NA	NA	41754069	41760175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41754100_41760200
ES.11832.1	chr15	+	4881	2	Genic_Genomic	ENSMUSG00000088469.3	novel	102	1	NA	NA	-2866	2147	multi-exon	FALSE	non_canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACCTTTGCTTCTGTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	41809526	41814641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_41810463_41810696
ES.11832.2	chr15	+	4321	2	Genic_Genomic	ENSMUSG00000088469.3	novel	102	1	NA	NA	-2863	2152	multi-exon	FALSE	canonical	1	1	junction_1	0	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTCTGTCTCCCGA	NA	False	NA	NA	False	ATTAAA	-23	NA	41809529	41814646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_41810401_41811196
ES.11832.3	chr15	+	209	1	Intergenic	novelGene_9877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATACACA	NA	False	NA	NA	False	NA	NA	NA	41810477	41810686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_41810500_41810700
ES.11833.1	chr15	-	191	1	Intergenic	novelGene_9878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAAAGCATATTT	NA	False	NA	NA	False	NA	NA	NA	41855347	41855156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_41855200_41855300
ES.11834.1	chr15	-	3768	9	NNC	ENSMUSG00000022309.10	novel	4260	9	NA	NA	254	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAATGTCTTCATAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	42539891	42288125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359625_42359856_42375679_42375802_42386899_42387056_42539560
ES.11835.1	chr15	+	180	1	Intergenic	novelGene_9879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	42807793	42807973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42807800_42808000
ES.11836.1	chr15	+	627	4	Intergenic	novelGene_9880	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCATCTACTGTCTTTAC	NA	False	NA	NA	False	AATAAA	-31	NA	42811080	42817507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42811222_42813761_42813895_42814202_42814412_42817363
ES.11836.2	chr15	+	966	4	Intergenic	novelGene_9882	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGAGAATGACTGCTCGA	NA	False	NA	NA	False	AATAAA	-23	NA	42811108	42825966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42811222_42813761_42813895_42814164_42814368_42825449
ES.11836.3	chr15	+	553	4	Intergenic	novelGene_9881	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	9.0921211313239	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCATTACAATCATCT	NA	False	NA	NA	False	AATAAA	-20	NA	42811108	42817496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42811196_42813764_42813895_42814164_42814368_42817363
ES.11836.4	chr15	+	933	4	Intergenic	novelGene_9883	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.54896090146283	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGACTGCTCGATTTC	NA	False	NA	NA	False	AATAAA	-27	NA	42811127	42825970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42811207_42813764_42813895_42814164_42814368_42825449
ES.11836.5	chr15	+	3138	3	Intergenic	novelGene_9884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGGAGAATGACTGCTCG	NA	False	NA	NA	False	AATAAA	-22	NA	42811475	42825965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_42813895_42814164_42814368_42825449
ES.11837.1	chr15	-	209	1	Intergenic	novelGene_9885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	42825316	42825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_42825100_42825300
ES.11838.1	chr15	-	5006	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	10	-3510	10	3510	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTCCCATCTTATTTT	2673	False	NA	NA	False	AATACA	-18	NA	43146105	43109943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.10	chr15	-	1671	14	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	156	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	993.070541598992	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGAATTTCCTTT	2912	False	NA	-16	True	AATAAA	-22	NA	43145866	43113447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43145800
ES.11838.11	chr15	-	1744	14	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	-22	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	986.125998646776	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGAATTTCCTTT	2641	False	NA	-16	True	AATAAA	-22	NA	43146137	43113447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43145998
ES.11838.13	chr15	-	4293	13	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	24	5	intron_retention	FALSE	canonical	3	39	junction_12	755.65341022779	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2687	False	NA	-17	True	AATAAA	-21	NA	43146091	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43144625_43145998
ES.11838.14	chr15	-	1470	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1028.72853022014	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2664	False	NA	-17	True	AATAAA	-21	NA	43146114	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126080_43126604_43126720_43128907_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.15	chr15	-	1494	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	762.505787774027	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2673	False	NA	-17	True	AATAAA	-21	NA	43146105	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129649_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.16	chr15	-	1521	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	764.90865013775	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2673	False	NA	-17	True	AATAAA	-21	NA	43146105	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115031_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.18	chr15	-	1491	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	758.809191357675	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2674	False	NA	-17	True	AATAAA	-21	NA	43146104	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135706_43138632_43138751_43141703_43141819_43145998
ES.11838.19	chr15	-	1500	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	77	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	765.715388088522	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2833	False	NA	-17	True	AATAAA	-21	NA	43145945	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145839
ES.11838.2	chr15	-	4833	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	0	-3327	0	3327	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTTTGGGTTTTTTC	2663	False	NA	NA	False	NA	NA	NA	43146115	43110126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.20	chr15	-	1400	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	11	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	1027.01634669994	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2674	False	NA	-17	True	AATAAA	-21	NA	43146104	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43128938_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141803_43145998
ES.11838.23	chr15	-	2753	12	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	5	intron_retention	FALSE	canonical	3	2534	junction_3	122.477793568285	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2663	False	NA	-17	True	AATAAA	-21	NA	43146115	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.24	chr15	-	1438	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	764.753496050997	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCTTGAATTTCCTT	2652	False	NA	-17	True	AATAAA	-21	NA	43146126	43113448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43128938_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.26	chr15	-	1553	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	75	3	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_12	740.976434435596	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGCTTGAATTTCC	2831	False	NA	-19	True	AATAAA	-19	NA	43145947	43113450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145786
ES.11838.27	chr15	-	3263	8	ISM	ENSMUSG00000022336.4	ENSMUST00000228892.2	2633	12	11268	-116	-27	0	3prime_fragment	FALSE	canonical	3	2495	junction_1	95.0424180273724	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	4137	False	NA	-22	True	AATAAA	-16	NA	43131910	43113453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529
ES.11838.28	chr15	-	3188	2	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	14652	0	intron_retention	FALSE	canonical	3	2745	junction_1	0	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	NA	False	NA	-22	True	AATAAA	-16	NA	43117231	43113453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43115011_43115600
ES.11838.29	chr15	-	1378	12	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	794.797442878757	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTATTTTGCTTGAAT	2664	False	NA	-23	True	AATAAA	-15	NA	43146114	43113454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.3	chr15	-	4607	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	1	-3102	1	3102	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGGTGGTATCCGTA	2664	False	NA	NA	False	NA	NA	NA	43146114	43110351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.30	chr15	-	1498	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	762.100696904433	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTATTTTGCTTGAA	2663	False	NA	-24	True	AATAAA	-14	NA	43146115	43113455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141709_43141819_43145998
ES.11838.31	chr15	-	1575	14	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	988.414940535885	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTATTTTGCTTGAA	2664	False	NA	-24	True	AATAAA	-14	NA	43146114	43113455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43131748_43131821_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.32	chr15	-	1448	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	767.989474754266	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTATTTTGCTTGAA	2674	False	NA	-24	True	AATAAA	-14	NA	43146104	43113455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124527_43126000_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.33	chr15	-	1467	12	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	778.225051900129	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTATTTTGCTTGAA	2677	False	NA	-24	True	AATAAA	-14	NA	43146101	43113455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134400_43138632_43138751_43141703_43141819_43145998
ES.11838.35	chr15	-	1596	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	766.930258128686	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTTATTTTGCTTGA	2675	False	NA	-25	True	AATAAA	-13	NA	43146103	43113456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129424_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.39	chr15	-	1488	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	762.505787774027	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTAATTTTTTATTTTG	2667	False	NA	-30	True	AATAAA	-8	NA	43146111	43113461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134280_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.4	chr15	-	4094	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	11	-2599	11	2599	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCAGTGTTAAGTTGAA	2674	False	NA	NA	False	AATAAA	-15	NA	43146104	43110854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.40	chr15	-	1646	10	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	15	10429	15	1205	5prime_fragment	FALSE	canonical	3	2534	junction_1	135.403101884706	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTAGTGTCTTTT	2678	False	NA	NA	False	ATTAAA	-6	NA	43146100	43123882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.5	chr15	-	1603	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	-81	-16	-81	16	multi-exon	FALSE	canonical	3	2495	junction_1	136.260065887095	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTTGTGCAAGTA	2582	False	NA	-6	True	AATAAA	-32	NA	43146196	43113437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.6	chr15	-	2887	3	ISM	ENSMUSG00000022336.4	ENSMUST00000228892.2	2633	12	25022	-132	13727	16	3prime_fragment	FALSE	canonical	3	2495	junction_1	125	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTTGTGCAAGTA	NA	False	NA	-6	True	AATAAA	-32	NA	43118156	43113437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_43113634_43114875_43115011_43115600
ES.11838.7	chr15	-	2803	12	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	11	16	intron_retention	FALSE	canonical	3	2495	junction_1	121.78703808135	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTTGTGCAAGTA	2674	False	NA	-6	True	AATAAA	-32	NA	43146104	43113437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43135715_43138632_43138751_43141703_43141819_43145998
ES.11838.8	chr15	-	1754	15	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	16	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1126.62992131038	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGAATTTCCTTT	2679	False	NA	-16	True	AATAAA	-22	NA	43146099	43113447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43144906_43144955_43145998
ES.11839.1	chr15	+	1275	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	-28	-16	-28	16	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGTTTTATTGGAA	NA	False	NA	26	True	AATAAA	-36	NA	43340596	43391175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.2	chr15	+	1263	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	229.109602592296	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGAAAATTCTAGTTT	NA	False	NA	9	True	AATAAA	-19	NA	43340615	43391158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371151_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.3	chr15	+	3081	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	229.854758488921	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTCTAGTTTCTTTT	NA	False	NA	14	True	AATAAA	-24	NA	43340625	43391163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_43340722_43355565_43355680_43356288_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.4	chr15	+	1427	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	36	-232	24	232	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATTCTTTAAAATTGA	NA	False	NA	NA	False	AATAAA	-14	NA	43340660	43391391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.5	chr15	+	1315	10	NIC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	34	-1	intron_retention	FALSE	canonical	3	590	junction_8	74.6160542749049	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGAAAATTCTAGTTT	NA	False	NA	9	True	AATAAA	-19	NA	43340670	43391158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.6	chr15	+	1179	11	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	298.139296302919	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTATGAAAATTCTAGT	NA	False	NA	7	True	AATAAA	-17	NA	43340671	43391156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360509_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377250_43390792
ES.11839.7	chr15	+	3005	8	NIC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	-1797	-1	intron_retention	FALSE	canonical	3	590	junction_6	84.0864472566471	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGAAAATTCTAGTTT	NA	False	NA	9	True	AATAAA	-19	NA	43356508	43391158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.8	chr15	+	4084	6	ISM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	27149	-6	9468	6	3prime_fragment	FALSE	canonical	3	590	junction_4	99.2419266237814	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTAGTTTCTTTTGT	NA	False	NA	16	True	AATAAA	-26	NA	43367773	43391165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ES.11839.9	chr15	+	12718	5	NNC	ENSMUSG00000022337.8	novel	1231	11	NA	NA	10472	10	intron_retention	TRUE	non_canonical	0	0	junction_4	296.602848941139	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTCTTTTGTTTTA	NA	False	NA	20	True	AATAAA	-30	NA	43368777	43391169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_43371127_43371257_43374293_43375095_43375207_43377140_43380356_43387161
ES.1184.1	chr1	-	163	1	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTTAAAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	118616502	118616339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118616300_118616500
ES.11840.1	chr15	-	3574	4	Antisense	novelGene_ENSMUSG00000022337.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43377477	43368270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_43371318_43374210_43374291_43375093_43375200_43377136
ES.11841.1	chr15	+	461	1	Antisense	novelGene_ENSMUSG00000038736.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCTTCACTCCTGGAACT	8892	False	NA	NA	False	AATAAA	-18	NA	44290763	44291224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_44290800_44291200
ES.11842.11	chr15	-	2132	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	467	1	14	-1	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCATTGTTTAGATTGG	NA	False	NA	70	True	AATAAA	-18	NA	44291236	44239467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.12	chr15	-	2109	10	NNC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-1	-71	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	107.23575044191	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCGAATCTCATCTTTTA	NA	False	NA	0	True	AATATA	-19	NA	44291256	44239537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264888_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.13	chr15	-	4354	10	NNC	ENSMUSG00000038736.11	novel	5077	10	NA	NA	4	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.185960827282	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCGAATCTCATCTTTT	NA	False	NA	-1	True	AATATA	-18	NA	44291280	44239538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44242329_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.14	chr15	-	1084	1	Intergenic	novelGene_9886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTGTGTTTTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	44249838	44248754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_44248800_44249800
ES.11842.15	chr15	-	4187	8	ISM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	434	9601	0	1310	5prime_fragment	FALSE	canonical	3	194	junction_3	49.1054675038891	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATCTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	44291269	44249067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.16	chr15	-	3516	8	FSM	ENSMUSG00000038736.11	ENSMUST00000227645.2	2895	8	48	-669	14	669	multi-exon	FALSE	canonical	3	89	junction_3	82.1752731069638	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTTCCATTTAATTG	NA	False	NA	NA	False	AATAAA	-15	NA	44291236	44249708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.17	chr15	-	1041	1	Genic_Genomic	ENSMUSG00000038736.11	novel	NA	NA	NA	NA	7905	18	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	44283276	44282235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_44282200_44283300
ES.11842.3	chr15	-	3035	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	407	-842	-12	842	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTGATGTTTGTT	NA	False	NA	-7	True	AATAAA	-18	NA	44291296	44238624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.4	chr15	-	2974	10	NNC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	193	842	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	105.700251702049	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTGATGTTTGTT	NA	False	NA	-7	True	AATAAA	-18	NA	44290988	44238624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44290810
ES.11842.6	chr15	-	5764	5	NNC	ENSMUSG00000038736.11	novel	5077	10	NA	NA	27197	840	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	141.189588851303	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTAGTGATGTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	44263984	44238626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44261905_44261960
ES.11842.7	chr15	-	2941	10	NNC	ENSMUSG00000038736.11	novel	5077	10	NA	NA	2	840	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	112.286340318946	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTAGTGATGTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	44291248	44238626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268879_44269205_44269389_44284114_44284270_44291057
ES.11842.8	chr15	-	3035	10	NNC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	-2	840	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	107.23575044191	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTAGTGATGTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	44291271	44238626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264888_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11842.9	chr15	-	2983	10	NNC	ENSMUSG00000038736.11	novel	2600	10	NA	NA	8	838	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	107.720259566099	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACCTGTAGTGATGTT	NA	False	NA	-11	True	AATAAA	-14	NA	44291242	44238628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_44240083_44243455_44243616_44251864_44251997_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ES.11843.1	chr15	+	4419	4	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	-10	0	intron_retention	FALSE	canonical	3	627	junction_1	155.701280948131	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	9606	False	NA	5	True	AATAAA	-16	NA	44291477	44301652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291639_44292955_44293033_44295833_44297370_44299007
ES.11843.12	chr15	+	4993	2	NIC	ENSMUSG00000022338.9	novel	2708	5	NA	NA	1	-8	intron_retention	FALSE	canonical	3	895	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAATGGGACTCTGTT	9617	False	NA	32	True	AATAAA	-34	NA	44291488	44299282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44293033_44295833
ES.11843.13	chr15	+	3013	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-17	4	2	-4	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTTGGCTCTCATTG	9618	False	NA	1	True	AATAAA	-12	NA	44291489	44301648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.14	chr15	+	1966	4	NIC	ENSMUSG00000022338.9	novel	2708	5	NA	NA	2	-6	intron_retention	FALSE	canonical	3	895	junction_1	43.5150037981793	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9618	False	NA	34	True	AATAAA	-36	NA	44291489	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.16	chr15	+	663	6	FSM	ENSMUSG00000022338.9	ENSMUST00000228130.2	654	6	-18	9	1	-9	multi-exon	FALSE	canonical	3	35	junction_2	414.684747730128	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAAATGGGACTCTGT	9633	False	NA	31	True	AATAAA	-33	NA	44291504	44299281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291567_44292955_44293033_44294086_44294191_44295833_44295905_44297294_44297370_44299007
ES.11843.17	chr15	+	6113	2	FSM	ENSMUSG00000118768.1_ENSMUSG00000022338.9	ENSMUST00000228372.2	684	2	-5429	0	1	0	multi-exon	FALSE	canonical	3	996	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAATTTTTTTATTTT	9640	False	NA	12	True	AATAAA	-14	NA	44291511	44299262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44297370_44299007
ES.11843.19	chr15	+	2116	5	NIC	ENSMUSG00000022338.9	novel	654	6	NA	NA	3	63	intron_retention	FALSE	canonical	3	35	junction_2	388.509571954154	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGTATTTATATGTGT	9642	False	NA	103	True	GATAAA	-20	NA	44291513	44299353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291567_44292955_44293033_44294086_44294191_44295833_44297370_44299007
ES.11843.2	chr15	+	2952	5	NIC	ENSMUSG00000022338.9	novel	2547	5	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	93	junction_3	380.98777867538	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGGCTCTCATTGA	9606	False	NA	2	True	AATAAA	-13	NA	44291477	44301649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291567_44292955_44293033_44295833_44295905_44297296_44297370_44299007
ES.11843.20	chr15	+	491	5	NIC	ENSMUSG00000022338.9	novel	558	5	NA	NA	-2	-67	combination_of_known_junctions	FALSE	canonical	3	90	junction_3	381.936185769298	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGTTTTCAGTAATG	9649	False	NA	19	True	AATAAA	-19	NA	44291520	44299184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291567_44292955_44293033_44295833_44295905_44297249_44297370_44299007
ES.11843.21	chr15	+	438	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	40	80	5	-68	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATACAGTTTTCAGTAAT	9656	False	NA	18	True	AATAAA	-18	NA	44291527	44299183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.22	chr15	+	503	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	28	2469	-8	-68	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATACAGTTTTCAGTAAT	9663	False	NA	18	True	AATAAA	-18	NA	44291534	44299183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.23	chr15	+	4289	4	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	-7	1	intron_retention	FALSE	canonical	3	895	junction_1	43.5150037981793	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCTCTCATTGATTTA	9664	False	NA	6	True	AATAAA	-17	NA	44291535	44301653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.3	chr15	+	1969	4	NIC	ENSMUSG00000022338.9	novel	558	5	NA	NA	0	-6	intron_retention	FALSE	canonical	3	313	junction_1	301.000922848345	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9616	False	NA	34	True	AATAAA	-36	NA	44291487	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291567_44292955_44293033_44295833_44297370_44299007
ES.11843.4	chr15	+	579	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	-21	0	-6	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9616	False	NA	34	True	AATAAA	-36	NA	44291487	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.5	chr15	+	2041	4	NIC	ENSMUSG00000022338.9	novel	767	6	NA	NA	0	-6	intron_retention	FALSE	canonical	3	627	junction_1	155.701280948131	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9616	False	NA	34	True	AATAAA	-36	NA	44291487	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44291639_44292955_44293033_44295833_44297370_44299007
ES.11843.6	chr15	+	7797	1	FSM	ENSMUSG00000022338.9	ENSMUST00000232045.2	848	1	-5068	-1881	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9616	False	NA	34	True	AATAAA	-36	NA	44291487	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291500_44299300
ES.11843.7	chr15	+	651	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-19	2368	0	-6	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGGGACTCTGTTTA	9616	False	NA	34	True	AATAAA	-36	NA	44291487	44299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ES.11843.9	chr15	+	3335	3	NIC	ENSMUSG00000022338.9	novel	2708	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	895	junction_1	50.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAATTTTTTTATTTT	9617	False	NA	12	True	AATAAA	-14	NA	44291488	44299262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44293033_44295833_44297370_44299007
ES.11844.1	chr15	+	146	1	Intergenic	novelGene_9887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATGCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	44478815	44478961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_44478800_44479000
ES.11845.1	chr15	+	1516	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-62	491	-62	-2	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTGTATATCCTTA	NA	False	NA	10	True	ATTAAA	-20	NA	44482508	44504420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.10	chr15	+	3327	5	NIC	ENSMUSG00000022339.10	novel	1945	7	NA	NA	4357	1	intron_retention	FALSE	canonical	3	80	junction_4	4.96865172858795	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTATATCCTTATTT	NA	False	NA	13	True	ATTAAA	-23	NA	44487343	44504423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_44487937_44490952_44491032_44491771_44493609_44500159_44500252_44503697
ES.11845.11	chr15	+	1652	5	ISM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	8379	3	7963	-3	3prime_fragment	FALSE	canonical	3	68	junction_2	8.49632273398321	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAACTGATTTTCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	44490949	44504908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.2	chr15	+	1956	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-8	-3	-8	3	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTTCTGTGGCTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	44482562	44504914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.3	chr15	+	2692	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	-8	-739	-8	739	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATAGATTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	44482562	44505650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.4	chr15	+	3661	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	115	-1831	115	1831	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	44482685	44506742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.5	chr15	+	1289	7	NNC	ENSMUSG00000022339.10	novel	1945	7	NA	NA	-96	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.4010233745876	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTGTATATCCTTA	NA	False	NA	10	True	ATTAAA	-20	NA	44482728	44504420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_44482766_44487838_44487930_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.6	chr15	+	5130	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	32	-3549	32	3060	multi-exon	FALSE	canonical	3	4	junction_1	29.9467119322899	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTTTGTCTCGATAT	NA	False	NA	NA	False	NA	NA	NA	44483018	44507971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.7	chr15	+	1561	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	50	2	50	-2	multi-exon	FALSE	canonical	3	4	junction_1	29.9467119322899	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTGTATATCCTTA	NA	False	NA	10	True	ATTAAA	-20	NA	44483036	44504420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.8	chr15	+	1520	7	FSM	ENSMUSG00000022339.10	ENSMUST00000226165.2	1931	7	207	204	56	-2	multi-exon	FALSE	canonical	2	3	junction_1	30.3076814612328	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTGTATATCCTTA	NA	False	NA	10	True	ATTAAA	-20	NA	44483042	44504420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_44483304_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11845.9	chr15	+	1710	7	NNC	ENSMUSG00000022339.10	novel	1613	7	NA	NA	122	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.392231877046	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATATTTTGTATATCCT	NA	False	NA	8	True	ATTAAA	-18	NA	44483108	44504418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_44483562_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ES.11846.1	chr15	+	406	1	Intergenic	novelGene_9888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	44773340	44773746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_44773300_44773700
ES.11847.1	chr15	-	2836	3	FSM	ENSMUSG00000022342.7	ENSMUST00000022967.7	4389	3	45	1508	45	-1508	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTCTCCCTATTTATT	NA	False	NA	NA	False	AATAAA	-41	NA	44978178	44971187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_44972882_44976285_44976816_44977566
ES.11848.1	chr15	-	176	1	Intergenic	novelGene_9889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	45079900	45079724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_45079700_45079900
ES.11849.1	chr15	+	177	1	Intergenic	novelGene_9890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	45515048	45515225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_45515000_45515200
ES.1185.1	chr1	-	175	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATGAA	NA	False	NA	NA	False	NA	NA	NA	118653124	118652949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118652900_118653100
ES.11850.1	chr15	+	1408	2	Intergenic	novelGene_9891	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTAGTCCTGGTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	45564459	45579969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_45565054_45579155
ES.11850.2	chr15	+	5352	2	Intergenic	novelGene_9892	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATATTTATTCAAATT	NA	False	NA	NA	False	AATAAA	-43	NA	45564848	45584302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_45565054_45579155
ES.11851.1	chr15	+	200	1	Intergenic	novelGene_9893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTTTACTCTTCACC	9127	False	NA	23	True	NA	NA	NA	46333723	46333923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_46333700_46333900
ES.11852.1	chr15	-	197	1	Intergenic	novelGene_9894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTTTTCTATATATTGT	NA	False	NA	NA	False	NA	NA	NA	47726321	47726124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_47726100_47726300
ES.11853.1	chr15	+	177	1	Intergenic	novelGene_9895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGCATCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	48577221	48577398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_48577200_48577400
ES.11854.1	chr15	-	156	1	Intergenic	novelGene_9896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48808024	48807868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_48807900_48808000
ES.11855.1	chr15	+	178	1	Intergenic	novelGene_9897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50413666	50413844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50413700_50413800
ES.11856.1	chr15	+	2582	1	Intergenic	novelGene_9899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCCAGAATTAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	50576053	50578635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50576100_50578600
ES.11857.1	chr15	+	3800	1	Intergenic	novelGene_9902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGACTATAATCAGCC	NA	False	NA	NA	False	AAAACA	-8	NA	50655024	50658824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50655000_50658800
ES.11857.2	chr15	+	3978	1	Intergenic	novelGene_9903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	50655025	50659003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50655000_50659000
ES.11858.1	chr15	+	4638	1	Intergenic	novelGene_9904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAATATGATGAGGCAG	NA	False	NA	NA	False	AATACA	-21	NA	50670409	50675047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50670400_50675000
ES.11858.2	chr15	+	4592	2	Antisense	novelGene_ENSMUSG00000038679.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAATATGATGAGGCAG	NA	False	NA	NA	False	AATACA	-21	NA	50670409	50675047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_50672701_50672746
ES.11859.1	chr15	+	1317	1	Intergenic	novelGene_9905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATTTCAGCCTATGGAG	NA	False	NA	NA	False	NA	NA	NA	50678982	50680299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_50679000_50680300
ES.1186.1	chr1	+	167	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	118847375	118847542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_118847400_118847500
ES.11860.1	chr15	-	5731	1	ISM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	229208	1	167038	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCTTATAGTAGCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	50523879	50518148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_50518100_50523900
ES.11860.10	chr15	-	6107	8	NIC	ENSMUSG00000038679.17	novel	3627	8	NA	NA	8	132	intron_retention	FALSE	canonical	0	0	junction_2	9.50187951332337	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGCTTTGACATTCAA	9976	False	NA	-18	True	AATAAA	-10	NA	50753429	50521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50628900_50628934_50685500_50686105_50694224_50694403_50695002_50695355_50709409_50710339_50752999
ES.11860.12	chr15	-	6254	7	NIC	ENSMUSG00000038679.17	novel	3627	8	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_2	10.2537256101814	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGATCGAGAGAAAGAAAA	NA	False	NA	49	True	NA	NA	NA	50752443	50521803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50628900_50628934_50685500_50686105_50694224_50695355_50709409_50710339_50752337
ES.11860.13	chr15	-	6256	7	NNC	ENSMUSG00000038679.17	novel	4436	7	NA	NA	42	-12	intron_retention	FALSE	canonical	1	2	junction_6	7.4535599249993	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATGGAAAAAGAA	9588	False	NA	16	True	NA	NA	NA	50753817	50521836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999_50753096_50753739
ES.11860.14	chr15	-	5809	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-361	4411	-11	-734	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGGTGCCTGACATATT	9957	False	NA	NA	False	AGTAAA	-22	NA	50753448	50522558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.15	chr15	-	3867	6	ISM	ENSMUSG00000038679.17	ENSMUST00000184885.8	3492	9	36010	-525	-19275	524	intron_retention	FALSE	canonical	1	1	junction_4	8.30421579681068	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTCAGTGCTTATGTAG	5025	False	NA	NA	False	AATATA	-17	NA	50710192	50523305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50694403_50695002_50695355_50709409
ES.11860.16	chr15	-	4788	7	NIC	ENSMUSG00000038679.17	novel	3627	8	NA	NA	-25	521	intron_retention	FALSE	canonical	0	0	junction_2	9.99027304709714	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTCCTCAGTGCTTATG	9521	False	NA	NA	False	AATATA	-14	NA	50753884	50523308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50628900_50628934_50685500_50686105_50694224_50695355_50709409_50710339_50753739
ES.11860.17	chr15	-	4682	6	NIC	ENSMUSG00000038679.17	novel	9859	6	NA	NA	47	520	intron_retention	FALSE	canonical	2	3	junction_5	7.63151361133557	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTCCTCAGTGCTTAT	9593	False	NA	NA	False	AATATA	-13	NA	50753812	50523309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50753739
ES.11860.18	chr15	-	5151	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-457	5165	-107	517	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATGTCCTCAGTGCT	9861	False	NA	NA	False	AATATA	-10	NA	50753544	50523312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.19	chr15	-	4620	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-461	5700	-111	-1	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAAAAAGG	9857	False	NA	NA	False	AATGAA	-40	NA	50753548	50523847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.2	chr15	-	4984	1	ISM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	229636	320	167466	-320	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCACTAAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	50523451	50518467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_50518500_50523500
ES.11860.20	chr15	-	4397	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-358	5820	-8	-121	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCCTTATCCAACATAAA	9960	False	NA	NA	False	ATTAAA	-17	NA	50753445	50523967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.21	chr15	-	4411	7	NIC	ENSMUSG00000038679.17	novel	3627	8	NA	NA	-8	-140	intron_retention	FALSE	canonical	0	0	junction_2	9.46484724300046	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATTCATAGAGC	9960	False	NA	NA	False	NA	NA	NA	50753445	50523986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50628900_50628934_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.22	chr15	-	4415	1	Intergenic	novelGene_9898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACGATGAAGGGGAAAAAAA	NA	False	NA	NA	False	AATACA	-42	NA	50556780	50552365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_50552400_50556800
ES.11860.23	chr15	-	4084	1	Intergenic	novelGene_9900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAATCACTTTCTC	NA	False	NA	NA	False	NA	NA	NA	50593090	50589006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_50589000_50593100
ES.11860.24	chr15	-	4388	1	Intergenic	novelGene_9901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAACTGAAAAGATGC	NA	False	NA	NA	False	ATTAAA	-9	NA	50640905	50636517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_50636500_50640900
ES.11860.25	chr15	-	3150	5	NNC	ENSMUSG00000038679.17	novel	3446	2	NA	NA	64	-590	intron_retention	FALSE	canonical	0	0	junction_1	8.86002257333467	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGGGTCAGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	50753023	50683484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_50683948_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11860.26	chr15	-	4595	1	Intergenic	novelGene_9906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGTTTGGACCATAAA	NA	False	NA	NA	False	NA	NA	NA	50734304	50729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_50729700_50734300
ES.11860.27	chr15	-	7449	1	Genic_Genomic	ENSMUSG00000038679.17	novel	NA	NA	NA	NA	1490	-33932	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCATATGTATACATT	1375	False	NA	NA	False	NA	NA	NA	50750952	50743503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_50743500_50751000
ES.11860.28	chr15	-	4158	1	Genic_Genomic	ENSMUSG00000038679.17	novel	NA	NA	NA	NA	-3130	-43260	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGCCGAGGGAGAGAGT	6416	False	NA	NA	False	ATTAAA	-41	NA	50756989	50752831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_50752800_50757000
ES.11860.3	chr15	-	9405	6	FSM	ENSMUSG00000038679.17	ENSMUST00000183757.8	6202	6	34	-3237	31	-440	multi-exon	FALSE	canonical	1	1	junction_5	8.30421579681068	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTTTGGTATGGTTTAT	NA	False	NA	1	True	AATAAA	-23	NA	50752411	50518587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752337
ES.11860.4	chr15	-	9069	9	NIC	ENSMUSG00000038679.17	novel	3492	9	NA	NA	-8	-443	intron_retention	FALSE	canonical	0	0	junction_2	9.2736184954957	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACGGCTTTGGTATGGTT	9960	False	NA	-2	True	AATAAA	-20	NA	50753445	50518590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_50525133_50528082_50528206_50628900_50628934_50685500_50686105_50694224_50694403_50695002_50695355_50709409_50709988_50710125_50710339_50752999
ES.11860.5	chr15	-	9795	7	NNC	ENSMUSG00000038679.17	novel	4436	7	NA	NA	-168	-446	intron_retention	FALSE	non_canonical	0	0	junction_6	8.03464719546263	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGACGGCTTTGGTATG	9800	False	NA	-5	True	AATAAA	-17	NA	50753605	50518593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999_50753112_50753247
ES.11860.7	chr15	-	6553	6	FSM	ENSMUSG00000038679.17	ENSMUST00000183757.8	6202	6	-183	-168	-183	150	multi-exon	FALSE	canonical	1	1	junction_5	8.30421579681068	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACTTGATATAATTTA	NA	False	NA	0	True	AATAAA	-28	NA	50752628	50521656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752337
ES.11860.8	chr15	-	5484	6	Fusion	ENSMUSG00000084458.3_ENSMUSG00000038679.17	novel	3492	9	NA	NA	-1	150	intron_retention	FALSE	canonical	0	0	junction_4	10.5943381105192	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACTTGATATAATTTA	NA	False	NA	0	True	AATAAA	-28	NA	50752443	50521656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50727278_50727324_50752337
ES.11860.9	chr15	-	6707	6	FSM	ENSMUSG00000038679.17	ENSMUST00000165201.9	9859	6	-359	3511	-9	148	multi-exon	FALSE	canonical	3	11	junction_5	5.30659966456864	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGACTTGATATAATT	9959	False	NA	-2	True	AATAAA	-26	NA	50753446	50521658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999
ES.11861.1	chr15	+	3109	7	NNC	ENSMUSG00000115339.2	novel	1505	4	NA	NA	-166	189721	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.372677996249965	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTTTTTCCCAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	50760868	50999424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_50761049_50765210_50765427_50775960_50776032_50945068_50945279_50994338_50994858_50996818_50998271_50998963
ES.11861.2	chr15	+	1651	3	NNC	ENSMUSG00000115339.2	novel	1505	4	NA	NA	1255	-32372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCACTGCCTCCCTGGA	NA	False	NA	NA	False	AATAAA	-10	NA	50762289	50777331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_50762354_50765210_50765427_50775960
ES.11862.1	chr15	-	176	1	Intergenic	novelGene_9907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAAAAACCTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	51602739	51602563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51602600_51602700
ES.11863.1	chr15	+	390	1	Intergenic	novelGene_9909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGTGACCACACTCTG	NA	False	NA	NA	False	NA	NA	NA	51703660	51704050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51703700_51704000
ES.11864.1	chr15	+	2909	1	Intergenic	novelGene_9910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAAGAAAA	1727	False	NA	NA	False	NA	NA	NA	51715377	51718286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51715400_51718300
ES.11865.1	chr15	+	2221	1	Intergenic	novelGene_9911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-34	NA	51723896	51726117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51723900_51726100
ES.11866.1	chr15	-	1173	8	NNC	ENSMUSG00000022312.12	novel	489	5	NA	NA	-19	18675	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	862.264768277265	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACGTCACGATGTGTG	NA	False	NA	NA	False	AGTAAA	-13	NA	51728869	51631278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51631475_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706017_51728717
ES.11866.10	chr15	-	2722	7	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-28	-6	intron_retention	FALSE	canonical	3	182	junction_5	649.641803013185	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTGTGTGTATTT	NA	False	NA	-18	True	AATAAA	-18	NA	51728878	51649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51662751_51705863_51706021_51728721
ES.11866.11	chr15	-	1225	8	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	195	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	673.611951515477	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTGTGTGTATTT	NA	False	NA	-18	True	AATAAA	-18	NA	51728655	51649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706017_51728517
ES.11866.12	chr15	-	5571	3	ISM	ENSMUSG00000022312.12	ENSMUST00000226756.2	520	4	-4619	-118	-4619	-6	intron_retention	FALSE	canonical	3	1963	junction_1	3.5	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTGTGTGTATTT	NA	False	NA	-18	True	AATAAA	-18	NA	51658564	51649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_51650222_51651301_51651435_51653388
ES.11866.15	chr15	-	4414	1	NIC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-6599	-4766	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAACAACTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	51660544	51656130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51656100_51660500
ES.11866.16	chr15	-	5747	1	Intergenic	novelGene_9908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAAGAACCGTGAT	NA	False	NA	NA	False	NA	NA	NA	51678329	51672582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51672600_51678300
ES.11866.2	chr15	-	1304	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	False	NA	-12	True	AATAAA	-24	NA	51728928	51649953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ES.11866.5	chr15	-	3807	6	NIC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	1867	junction_3	53.8107795892236	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	-14	True	AATAAA	-22	NA	51728879	51649955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51662756_51705863_51706021_51728721
ES.11866.6	chr15	-	1091	7	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	706.396823479708	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	False	NA	-14	True	AATAAA	-22	NA	51728879	51649955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662751_51728721
ES.11866.9	chr15	-	958	7	NNC	ENSMUSG00000022312.12	novel	1295	8	NA	NA	16347	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	706.396823479708	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTGTGTGTATTT	NA	False	NA	-18	True	AATAAA	-18	NA	51683306	51649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51683282
ES.11867.1	chr15	+	177	1	Intergenic	novelGene_9912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAACAGAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	51730576	51730753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51730600_51730800
ES.11868.1	chr15	-	226	1	Intergenic	novelGene_9913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTAGTGATTGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	51736585	51736359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51736400_51736600
ES.11869.1	chr15	+	1026	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	-23	1918	-23	7	multi-exon	FALSE	canonical	3	321	junction_1	13	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTTTGGGGATGT	NA	False	NA	34	True	AGTAAA	-31	NA	51740801	51746092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51744411_51744587_51745546
ES.11869.2	chr15	+	2962	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	13	-54	13	54	multi-exon	FALSE	canonical	3	321	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAGGCCATTTTATTA	NA	False	NA	NA	False	AAGAAA	-14	NA	51740837	51748064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51744411_51744587_51745546
ES.11869.3	chr15	+	2266	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	13	642	13	-642	multi-exon	FALSE	canonical	3	321	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGGTCATAAACTCG	NA	False	NA	NA	False	AATAAA	-14	NA	51740837	51747368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51744411_51744587_51745546
ES.11869.4	chr15	+	2121	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	26	774	-23	-774	multi-exon	FALSE	canonical	3	321	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATCTTTGACAGTTGG	NA	False	NA	NA	False	AATAAA	-24	NA	51740850	51747236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51744411_51744587_51745546
ES.11869.5	chr15	+	2058	2	FSM	ENSMUSG00000022313.11	ENSMUST00000059599.10	740	2	-30	-1288	-3	-642	multi-exon	FALSE	canonical	1	4	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTGGTCATAAACTCG	NA	False	NA	NA	False	AATAAA	-14	NA	51740870	51747368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51745546
ES.11869.6	chr15	+	2580	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	46	295	-3	-295	multi-exon	FALSE	canonical	3	321	junction_1	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGAGTATCTACTGCC	NA	False	NA	NA	False	AATAAA	-25	NA	51740870	51747715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51741107_51744411_51744587_51745546
ES.1187.1	chr1	+	421	2	Antisense	novelGene_ENSMUSG00000048402.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAGAAAAAGGAGACT	NA	False	NA	NA	False	NA	NA	NA	118913341	118914756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_118913546_118914539
ES.11870.1	chr15	+	198	1	Intergenic	novelGene_9914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAACACTAGACACTATG	NA	False	NA	NA	False	NA	NA	NA	51749489	51749687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51749500_51749700
ES.11871.1	chr15	+	220	1	Intergenic	novelGene_9915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAAGATCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	51769900	51770120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51769900_51770100
ES.11872.1	chr15	+	157	1	Intergenic	novelGene_9916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	51850016	51850173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51850000_51850200
ES.11873.1	chr15	+	387	1	Intergenic	novelGene_9917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTTTAGTTGCTAC	NA	False	NA	NA	False	NA	NA	NA	51861543	51861930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_51861500_51861900
ES.11874.1	chr15	-	6147	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	47	-2238	47	2238	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGCATTGATTTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	51855096	51823397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.10	chr15	-	3582	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-53	-365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	206.606105525071	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855196	51826000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846102_51855006
ES.11874.11	chr15	-	3468	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	66	-365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.606105525071	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855077	51826000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846043_51854942
ES.11874.16	chr15	-	5151	12	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	40	-365	intron_retention	FALSE	canonical	3	565	junction_11	74.0054722122315	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855103	51826000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.17	chr15	-	3701	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	0	-365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.116399737212	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855143	51826000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51832029_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.18	chr15	-	3677	15	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-4	-366	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	267.614909517236	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855147	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854123_51854207_51854942
ES.11874.2	chr15	-	3788	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	-104	272	-104	-272	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTTTGTGCTAATTAA	NA	False	NA	71	True	AAAAAG	-36	NA	51855247	51825907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.20	chr15	-	3533	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	51	-366	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.721949183611	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855092	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833535_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.21	chr15	-	3542	4	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	10072	-366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	355.488708994002	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51844834	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830391_51843431
ES.11874.22	chr15	-	3380	12	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-20	-366	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	218.93215674313	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855163	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51845924_51846100_51854942
ES.11874.23	chr15	-	3485	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	40	-366	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	209.475224841711	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855103	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828391_51829998_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.24	chr15	-	4102	13	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	32	-366	intron_retention	FALSE	canonical	3	565	junction_12	71.7592425328535	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855111	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.25	chr15	-	5093	13	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	40	-366	intron_retention	FALSE	canonical	3	565	junction_12	72.1420281266213	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855103	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.26	chr15	-	3435	13	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	39	-366	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	214.974207109184	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855104	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51836471_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.28	chr15	-	3523	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	52	-366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	209.475224841711	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	NA	False	NA	-23	True	AATAAA	-18	NA	51855091	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828428_51829985_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.29	chr15	-	3714	15	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-8505	-366	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	266.411987228007	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAACATACTCA	1859	False	NA	-23	True	AATAAA	-18	NA	51863648	51826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51856805_51856938_51863455
ES.11874.3	chr15	-	3711	14	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-42	-362	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	201.697735067504	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAACATACTCAGTTG	NA	False	NA	-19	True	AATAAA	-22	NA	51854948	51825997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854630
ES.11874.31	chr15	-	3487	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	34	-367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	277.412046939174	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTTTGGAACATACTC	NA	False	NA	-24	True	AATAAA	-17	NA	51855109	51826002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829983_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846102_51855006
ES.11874.32	chr15	-	3563	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	20	-367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	207.693133901491	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTTTGGAACATACTC	NA	False	NA	-24	True	AATAAA	-17	NA	51855123	51826002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830122_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.33	chr15	-	3523	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	1	-368	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	206.606105525071	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTTTGGAACATACT	NA	False	NA	-25	True	AATAAA	-16	NA	51855142	51826003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846102_51855008
ES.11874.34	chr15	-	3693	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-5	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.116399737212	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTTTGGAACATACT	NA	False	NA	-25	True	AATAAA	-16	NA	51855148	51826003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833216_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.35	chr15	-	3632	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-6	-368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	276.682416794623	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTTTGGAACATACT	NA	False	NA	-25	True	AATAAA	-16	NA	51855149	51826003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833216_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846102_51855006
ES.11874.36	chr15	-	3549	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	34	373	34	-373	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTACATTTTGGAAC	NA	False	NA	-30	True	AATAAA	-11	NA	51855109	51826008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.37	chr15	-	3384	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	0	572	0	-572	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGACGTGCCTGTAACC	NA	False	NA	NA	False	TATAAA	-24	NA	51855143	51826207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.38	chr15	-	3173	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	-51	834	-51	-834	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATAGCACCAGAAATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	51855194	51826469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.39	chr15	-	3232	14	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-39	-838	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	201.697735067504	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCAGATAGCACCAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	51854945	51826473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854630
ES.11874.4	chr15	-	3602	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	-17	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.475224841711	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855160	51825999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828428_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11874.40	chr15	-	3015	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	37	-841	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	206.606105525071	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGACCAGATAGCACCAG	NA	False	NA	NA	False	AATAAA	-13	NA	51855106	51826476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51855005
ES.11874.41	chr15	-	2814	2	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	17257	3155	intron_retention	FALSE	canonical	3	802	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAACTTGGCCAATCAC	NA	False	NA	NA	False	NA	NA	NA	51837649	51834077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51835724_51836481
ES.11874.6	chr15	-	4210	11	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	13398	-364	intron_retention	FALSE	canonical	3	643	junction_6	53.0282943342514	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51841508	51825999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_51827644_51828350_51828435_51829977_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440
ES.11874.9	chr15	-	3512	14	NNC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	34	-365	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	207.442099999183	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGAACATACTCAG	NA	False	NA	-22	True	AATAAA	-19	NA	51855109	51826000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831228_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ES.11875.1	chr15	-	170	1	Intergenic	novelGene_9918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGGTCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	51868645	51868475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51868500_51868600
ES.11876.1	chr15	-	134	1	Intergenic	novelGene_9919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	51876354	51876220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51876200_51876400
ES.11877.1	chr15	-	156	1	Antisense	novelGene_ENSMUSG00000115238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	51899224	51899068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_51899100_51899200
ES.11878.1	chr15	+	1432	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	-86	2	-86	-2	multi-exon	FALSE	canonical	3	258	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTTTCTAGTGGTC	NA	False	NA	14	True	AATAAA	-25	NA	51903416	51909116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_51903927_51908194
ES.11879.1	chr15	-	157	1	Intergenic	novelGene_9920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	51926674	51926517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_51926500_51926700
ES.1188.1	chr1	+	5987	2	Antisense	novelGene_ENSMUSG00000048402.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118933576	118939642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_118936939_118937017
ES.11880.1	chr15	+	883	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-36	160	-2	-160	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAATAAAAATT	NA	False	NA	-10	True	AATAAA	-3	NA	52575801	52593800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ES.11880.2	chr15	+	762	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	-17	262	17	-262	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTAGCTTTTTTTTTA	NA	False	NA	NA	False	ACTAAA	-23	NA	52575820	52593698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ES.11880.3	chr15	+	821	4	NNC	ENSMUSG00000038622.9	novel	1007	4	NA	NA	0	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	295.813379608759	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAATAAAAATT	NA	False	NA	-10	True	AATAAA	-3	NA	52575837	52593800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_52576083_52582741_52582875_52584419_52584525_52593462
ES.11880.4	chr15	+	1190	6	NNC	ENSMUSG00000038622.9	novel	1007	4	NA	NA	2	-160	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	300.917663157216	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAATAAAAATT	NA	False	NA	-10	True	AATAAA	-3	NA	52575839	52593800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_52576083_52578524_52578709_52580830_52580992_52582741_52582901_52584419_52584525_52593462
ES.11880.5	chr15	+	915	5	NNC	ENSMUSG00000038622.9	novel	1007	4	NA	NA	7	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	306.89768246111	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAATAAAAATT	NA	False	NA	-10	True	AATAAA	-3	NA	52575844	52593800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_52576083_52578633_52578709_52582741_52582901_52584419_52584525_52593462
ES.11880.6	chr15	+	816	5	NNC	ENSMUSG00000038622.9	novel	1007	4	NA	NA	215	-160	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	305.138493146964	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAAATAAAAATT	NA	False	NA	-10	True	AATAAA	-3	NA	52576052	52593800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_52576083_52578524_52578709_52582741_52582901_52584419_52584525_52593462
ES.11881.1	chr15	-	5011	1	Intergenic	novelGene_9921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGGGCCCAGGTCCTTT	NA	False	NA	NA	False	TTTAAA	-11	NA	52831351	52826340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_52826300_52831400
ES.11882.1	chr15	+	202	1	Intergenic	novelGene_9922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCCTCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	52938948	52939150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_52938900_52939200
ES.11883.1	chr15	+	209	1	Intergenic	novelGene_9923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGGCATTTGTGCATCC	NA	False	NA	NA	False	NA	NA	NA	52985798	52986007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_52985800_52986000
ES.11884.1	chr15	+	2567	1	Intergenic	novelGene_9924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-11	NA	53164233	53166800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_53164200_53166800
ES.11884.2	chr15	+	2361	1	Intergenic	novelGene_9925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGTTGTAGCAACACAC	NA	False	NA	NA	False	AATAAA	-1	NA	53164235	53166596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_53164200_53166600
ES.11885.1	chr15	+	650	1	Intergenic	novelGene_9927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGCACTGTAACTCTA	548	False	NA	NA	False	NA	NA	NA	53194705	53195355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_53194700_53195400
ES.11886.1	chr15	-	3466	11	FSM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	-34	4231	-34	395	multi-exon	TRUE	canonical	3	89	junction_10	11.8574870862253	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATTGTGTTGGTTG	NA	False	NA	-4	True	ATTAAA	-19	NA	53209589	52931664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
ES.11886.2	chr15	-	7675	10	NIC	ENSMUSG00000061731.10	novel	7663	11	NA	NA	-21	395	intron_retention	FALSE	canonical	3	89	junction_9	12.4791183607548	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATTGTGTTGGTTG	NA	False	NA	-4	True	ATTAAA	-19	NA	53209576	52931664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52969531_52970873_52970968_53207797
ES.11886.3	chr15	-	3532	12	NNC	ENSMUSG00000061731.10	novel	7663	11	NA	NA	-51	393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.017352026425	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAAAATTGTGTTGGT	NA	False	NA	-6	True	ATTAAA	-17	NA	53209606	52931666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53190447_53190499_53207797
ES.11886.4	chr15	-	10562	10	NIC	ENSMUSG00000061731.10	novel	7663	11	NA	NA	-43	327	intron_retention	FALSE	canonical	3	89	junction_9	12.4791183607548	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTGCTATGCAGGTT	NA	False	NA	-72	True	ATTAAA	-13	NA	53209598	52931732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_52932246_52936688_52936861_52939164_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
ES.11886.5	chr15	-	5093	1	Intergenic	novelGene_9926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAACCAAAAAAAA	5467	False	NA	NA	False	NA	NA	NA	53183632	53178539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_53178500_53183600
ES.11887.1	chr15	-	3191	5	FSM	ENSMUSG00000058656.14	ENSMUST00000078673.14	9019	5	32	5796	32	2015	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTGCATATGAGCC	NA	False	NA	NA	False	NA	NA	NA	53765894	53323001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_53325613_53521745_53521887_53583010_53583141_53723499_53723679_53765764
ES.11887.2	chr15	-	2365	1	Intergenic	novelGene_9928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	53524707	53522342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_53522300_53524700
ES.11888.1	chr15	+	2735	4	FSM	ENSMUSG00000024479.4	ENSMUST00000025356.4	2950	4	208	7	208	-7	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGGGTCACTCTTT	NA	False	NA	4	True	AATAAA	-14	NA	54434795	54466236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54435034_54451709_54451881_54461806_54461963_54464066
ES.11889.1	chr15	+	1231	5	FSM	ENSMUSG00000037362.9	ENSMUST00000050027.9	2869	5	212	1426	212	-1426	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGGCCATTTATATTT	7675	False	NA	NA	False	AATGAA	-27	NA	54609309	54616009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54609434_54609567_54609794_54611158_54611420_54612545_54612761_54615604
ES.1189.1	chr1	-	8406	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-1690	-79	-1690	79	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCTGTATTTTTTTCAT	NA	False	NA	76	True	AGTAAA	-22	NA	118983039	118761782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ES.1189.10	chr1	-	6452	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-377	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.740467130452	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	852	False	NA	-5	True	ATTAAA	-15	NA	118981726	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118892179_118892291_118929769_118929937_118981596
ES.1189.11	chr1	-	6476	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	32.6397635816601	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	1221	False	NA	-5	True	ATTAAA	-15	NA	118981357	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118981031
ES.1189.12	chr1	-	9339	12	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	46	-2	intron_retention	FALSE	canonical	0	0	junction_5	32.3822724688669	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	1275	False	NA	-5	True	ATTAAA	-15	NA	118981303	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118769928_118772080_118773797_118776112_118776248_118780987_118781135_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ES.1189.13	chr1	-	6349	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-475	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	40.8005685074674	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	754	False	NA	-5	True	ATTAAA	-15	NA	118981824	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773669_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981769
ES.1189.15	chr1	-	6830	15	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-84	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	40.1245509861074	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	1145	False	NA	-5	True	ATTAAA	-15	NA	118981433	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118892179_118892291_118929769_118929937_118981031
ES.1189.16	chr1	-	6338	13	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-375	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.1158290379705	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATCTTGTTGATCTG	854	False	NA	-6	True	ATTAAA	-14	NA	118981724	118761864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981596
ES.1189.17	chr1	-	5179	7	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-118	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	40.2385249343075	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATCTTGTTGATCTG	1391	False	NA	-6	True	ATTAAA	-14	NA	118981187	118761864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769837_118795732_118795912_118818025_118818132_118929769_118929937_118981031
ES.1189.18	chr1	-	6219	12	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-596	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	33.7944687146059	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATCTTGTTGATCTG	633	False	NA	-6	True	ATTAAA	-14	NA	118981945	118761864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118981769
ES.1189.2	chr1	-	6720	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-84	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	31.5883283066246	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGATCTGCTTTTCC	1145	False	NA	1	True	ATTAAA	-21	NA	118981433	118761857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929932_118981031
ES.1189.21	chr1	-	6723	15	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	46.0011091259366	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTATCTTGTTGATCTG	1258	False	NA	-6	True	ATTAAA	-14	NA	118981320	118761864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118793741_118793880_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981051
ES.1189.22	chr1	-	6528	15	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-51	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	37.9734063765253	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTATCTTGTTGATC	1458	False	NA	-8	True	ATTAAA	-12	NA	118981120	118761866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118980248_118980374_118981031
ES.1189.24	chr1	-	5228	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-77	-1380	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTCTGGTGTTTGTG	1152	False	NA	NA	False	AAAAAG	-22	NA	118981426	118763241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
ES.1189.25	chr1	-	5369	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	-118	1386	-118	-1386	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGCCAGCCTCTGGTG	1111	False	NA	NA	False	AAAAAG	-16	NA	118981467	118763247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ES.1189.26	chr1	-	2741	3	NNC	ENSMUSG00000048402.15	novel	367	3	NA	NA	114487	7396	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	58	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGGTGTCTAAGGGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	118795831	118788375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118790808_118794301_118794488_118795708
ES.1189.27	chr1	-	3124	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCCGGGGCTAGGATT	2774	False	NA	NA	False	AATAAA	-17	NA	118979804	118976680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118976700_118979800
ES.1189.28	chr1	-	1735	2	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-1249	-184434	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTGTGATGGATGAG	-20	True	NA	0	True	NA	NA	NA	118982598	118980205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118980374_118981031
ES.1189.29	chr1	-	1034	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118983256	118982222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_118982200_118983300
ES.1189.3	chr1	-	6641	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-106	4	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGATCTGCTTTTCC	1123	False	NA	1	True	ATTAAA	-21	NA	118981455	118761857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
ES.1189.4	chr1	-	7151	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-1249	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	30.8433722129643	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTGATCTGCTTTTC	-20	True	NA	0	True	ATTAAA	-20	NA	118982598	118761858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981769
ES.1189.5	chr1	-	6740	15	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	39.1824617159572	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTTGATCTGCTTTT	1266	False	NA	-1	True	ATTAAA	-19	NA	118981312	118761859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118793741_118793880_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ES.1189.6	chr1	-	6547	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-2468	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.5883283066246	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTTGATCTGCTTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	118983817	118761859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118983591
ES.1189.7	chr1	-	6324	13	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.9834431948964	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTTGTTGATCTGCTT	NA	False	NA	-3	True	ATTAAA	-17	NA	118910392	118761861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773669_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118910197
ES.1189.9	chr1	-	6797	14	NNC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	-1263	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.5883283066246	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTTGTTGATCTGC	NA	False	NA	-5	True	ATTAAA	-15	NA	118982612	118761863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118982132
ES.11890.1	chr15	-	194	1	Intergenic	novelGene_9929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTGGACTCCAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	54685829	54685635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_54685600_54685800
ES.11891.1	chr15	+	4727	1	Antisense	novelGene_ENSMUSG00000037343.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAGGAATATGGATTTAA	NA	False	NA	NA	False	NA	NA	NA	54881851	54886578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_54881900_54886600
ES.11891.2	chr15	+	4647	2	Antisense	novelGene_ENSMUSG00000037343.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAGGAATATGGATTTA	NA	False	NA	NA	False	NA	NA	NA	54881851	54886577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_54884759_54884837
ES.11891.3	chr15	+	2972	2	Antisense	novelGene_ENSMUSG00000037343.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGGAATATGGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	54881851	54886579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_54883027_54884782
ES.11892.1	chr15	+	8552	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	-3	-2	-3	2	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGACTTTTTCTCTC	NA	False	NA	12	True	AATAAA	-23	NA	54975709	55122669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.10	chr15	+	1445	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	150	6952	43	-1883	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTTGGTGGCTCAAGT	NA	False	NA	NA	False	TTTAAA	-15	NA	54975862	55115715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.11	chr15	+	4412	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	43	1486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	13.0251418797514	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	54975862	55119084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55118324_55118725
ES.11892.12	chr15	+	8014	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.0251418797514	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTGCTGACTTTTTCT	NA	False	NA	9	True	AATAAA	-20	NA	54975865	55122666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55118661_55119039
ES.11892.13	chr15	+	5266	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	157	3124	50	1945	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAGCACAGTCACTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	54975869	55119543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.14	chr15	+	981	1	Antisense	novelGene_ENSMUSG00000053749.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAGAGTATTTTGTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	54976196	54977177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_54976200_54977200
ES.11892.15	chr15	+	161	1	Intergenic	novelGene_9930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTAAAAAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	54992749	54992910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_54992700_54992900
ES.11892.16	chr15	+	3278	1	Intergenic	novelGene_9933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACTTAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	55064931	55068209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55064900_55068200
ES.11892.17	chr15	+	7363	2	ISM	ENSMUSG00000022419.17	ENSMUST00000023056.8	3300	9	84732	-5061	84715	-8	3prime_fragment	FALSE	canonical	3	37	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACCAAGTGCTGAC	NA	False	NA	2	True	AATAAA	-13	NA	55081563	55122659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_55081670_55115402
ES.11892.18	chr15	+	174	1	Intergenic	novelGene_9935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55112182	55112356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55112200_55112400
ES.11892.19	chr15	+	4497	2	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	120969	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTGACTTTTTCTC	5349	False	NA	10	True	AATAAA	-21	NA	55117817	55122667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55118675_55119027
ES.11892.2	chr15	+	8135	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	-52	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	13.0251418797514	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAAGTGCTGACTTTTT	NA	False	NA	7	True	AATAAA	-18	NA	54975767	55122664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55118674_55119027
ES.11892.20	chr15	+	3702	2	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	124623	3122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGTTTCCGTGTCGT	9003	False	NA	NA	False	NA	NA	NA	55121471	55125789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55123143_55123758
ES.11892.3	chr15	+	4404	2	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	-40	-1788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGTTTAATGCAGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	54975779	55120879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54975875_55116570
ES.11892.4	chr15	+	4975	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	-40	1943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.0251418797514	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAGAGCACAGTCACT	NA	False	NA	NA	False	TTTAAA	-41	NA	54975779	55119541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55118661_55119039
ES.11892.5	chr15	+	5098	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	107	3342	0	1727	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGTTGGACTCATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	54975819	55119325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.6	chr15	+	4703	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	111	3733	4	1336	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGGTGTTGGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	54975823	55118934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.7	chr15	+	3518	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	143	4886	36	183	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACATGGCTTGAATTT	NA	False	NA	NA	False	ACTAAA	-10	NA	54975855	55117781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ES.11892.8	chr15	+	4448	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	42	1521	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	13.0251418797514	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGCTGTGTAGCATAG	NA	False	NA	NA	False	AATAAA	-18	NA	54975861	55119119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55118313_55118714
ES.11892.9	chr15	+	2437	10	NNC	ENSMUSG00000022419.17	novel	8547	9	NA	NA	43	1306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	13.0251418797514	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54975862	55118904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402_55116537_55118733
ES.11893.1	chr15	-	5061	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-23	5	intron_retention	FALSE	non_canonical	0	0	junction_25	41.14333967971	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTTTTTCTTTATC	NA	False	NA	-1	True	AATAAA	-23	NA	54935571	54878521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.10	chr15	-	5079	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_14	54.2630629434056	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	54935548	54878526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912136_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934834_54935182
ES.11893.12	chr15	-	4783	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	57.6976407791453	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	54935544	54878526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909358_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.16	chr15	-	4931	25	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	64.9172416534228	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54935546	54878527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927971_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.17	chr15	-	4803	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	57.2849335293972	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54935544	54878527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903864_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.19	chr15	-	5003	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	54.5170211952194	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54935546	54878527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909358_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.2	chr15	-	4954	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-9	5	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5787357860184	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTTTTTCTTTATC	NA	False	NA	-1	True	AATAAA	-23	NA	54935557	54878521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891851_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.20	chr15	-	4977	25	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_24	41.941675773229	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGCCTTTGTTTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	54935546	54878527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54935238
ES.11893.23	chr15	-	5021	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-2	intron_retention	FALSE	canonical	1	1	junction_25	40.9646872318098	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935546	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934834_54935238
ES.11893.24	chr15	-	5241	26	NIC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	1	junction_12	47.1576759393421	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935565	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910798_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788
ES.11893.25	chr15	-	6505	32	Fusion	ENSMUSG00000037343.9_ENSMUSG00000022422.14	novel	5031	26	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_24	49.0593940190791	405	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54953869	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934834_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.27	chr15	-	5195	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_26	63.0040033479605	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935548	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54933800_54933965_54934788_54934842_54935238
ES.11893.3	chr15	-	5073	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-23	5	intron_retention	FALSE	non_canonical	0	0	junction_22	54.5922485340181	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTTTTTCTTTATC	NA	False	NA	-1	True	AATAAA	-23	NA	54935571	54878521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927971_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.31	chr15	-	4975	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_22	54.5922485340181	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935543	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926480_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.32	chr15	-	4824	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	57.7804582964409	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935548	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927971_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.33	chr15	-	5453	25	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_22	55.3817559209609	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935546	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910798_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927971_54928103_54929255_54929417_54934788
ES.11893.34	chr15	-	4761	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	59.030839397725	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935546	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929251_54929417_54935238
ES.11893.38	chr15	-	4840	24	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_16	56.5581488080838	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935543	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.39	chr15	-	5014	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	54.0863605726989	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTCTGCCTTTGTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	54935543	54878528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897611_54899907_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.4	chr15	-	4824	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	46.5584985473356	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTTTTTCTTTATC	NA	False	NA	-1	True	AATAAA	-23	NA	54935553	54878521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.40	chr15	-	4959	25	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	54.6053867662238	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTCTGCCTTTGTTTT	NA	False	NA	-9	True	AATAAA	-15	NA	54935548	54878529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934841_54935238
ES.11893.42	chr15	-	4714	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.7652871746247	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACAGTCTGCCTTTGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	54935546	54878530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891851_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934841_54935238
ES.11893.44	chr15	-	4757	27	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	57.7804582964409	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACAGTCTGCCTTTGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	54935546	54878530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926480_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.45	chr15	-	4847	24	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	55.5922571480995	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACAGTCTGCCTTTGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	54935546	54878530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ES.11893.48	chr15	-	4141	25	ISM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	716	573	463	-202	3prime_fragment	FALSE	canonical	3	148	junction_17	17.2167554047407	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTCTTGCTGAATG	NA	False	NA	NA	False	NA	NA	NA	54934832	54879099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788
ES.11893.49	chr15	-	3067	10	Fusion	ENSMUSG00000053749.13_ENSMUSG00000022422.14	novel	1499	10	NA	NA	290	49	multi-exon	FALSE	canonical	0	0	junction_9	83.198557679806	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTAATGATGTGTGTG	NA	False	NA	44	True	ATTAAA	-20	NA	54976566	54939445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621_54954754_54975738
ES.11893.50	chr15	-	1542	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	-35	-8	-24	5	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTTCTTTAAGAA	NA	False	NA	0	True	AATAAA	-22	NA	54953911	54939489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.51	chr15	-	3908	8	NIC	ENSMUSG00000022422.14	novel	1324	9	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	218	junction_6	28.1410441765571	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATCCCTGACTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	54953907	54939495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.52	chr15	-	1262	9	NNC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	86.3639645627735	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54953886	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950206_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.53	chr15	-	1947	9	NIC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	31	junction_4	78.4661551243592	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54953869	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.54	chr15	-	2334	12	Fusion	ENSMUSG00000053749.13_ENSMUSG00000022422.14	novel	1499	10	NA	NA	-18	0	multi-exon	FALSE	canonical	0	0	junction_9	114.189490188114	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	9988	False	NA	-8	True	AATAAA	-14	NA	54976874	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621_54954374_54954619_54954754_54975738_54975993_54976735
ES.11893.55	chr15	-	1260	4	NIC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	3694	0	intron_retention	FALSE	canonical	3	222	junction_3	36.4173340899938	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	5214	False	NA	-8	True	AATAAA	-14	NA	54947459	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54939662_54943588_54943738_54945562_54946495_54947444
ES.11893.56	chr15	-	4617	7	NIC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	16	0	intron_retention	FALSE	canonical	3	218	junction_5	29.953667926019	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54953860	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54951133_54952350_54952520_54953621
ES.11893.57	chr15	-	1211	9	NNC	ENSMUSG00000022422.14	novel	1499	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.1074909633302	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54953867	54939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54939662_54943588_54943738_54945562_54945628_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.58	chr15	-	7698	8	NNC	ENSMUSG00000022422.14	novel	1324	9	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	91.9591746152518	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTTTTATCCCTGACT	NA	False	NA	-10	True	AATAAA	-12	NA	54953887	54939499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54942746_54942858_54943738_54945562_54945718_54946441_54946495_54947444_54950240_54950997_54951133_54952350_54952520_54953621
ES.11893.59	chr15	-	744	4	NIC	ENSMUSG00000053749.13	novel	935	5	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGACTTACCTTTTA	9977	False	NA	NA	False	ATTAAA	-14	NA	54976885	54963313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_54963589_54972308_54972374_54975738_54975993_54976735
ES.11893.7	chr15	-	5116	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_22	54.207010616709	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	54935571	54878526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927971_54928103_54929255_54929417_54934788_54934834_54935182
ES.11894.1	chr15	-	1795	1	Antisense	novelGene_ENSMUSG00000022419.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	54997347	54995552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_54995600_54997300
ES.11895.1	chr15	-	174	1	Intergenic	novelGene_9931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCGAGTAGGGAT	NA	False	NA	NA	False	NA	NA	NA	55008723	55008549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55008500_55008700
ES.11896.1	chr15	-	220	1	Intergenic	novelGene_9932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGAATTTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	55032074	55031854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55031900_55032100
ES.11897.1	chr15	-	177	1	Intergenic	novelGene_9934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTTAAAAAACCA	9904	False	NA	NA	False	NA	NA	NA	55074199	55074022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55074000_55074200
ES.11898.1	chr15	+	319	1	Intergenic	novelGene_9936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATGGGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	55132591	55132910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55132600_55132900
ES.11899.1	chr15	-	1787	1	Intergenic	novelGene_9937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTCTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-28	NA	55143273	55141486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55141500_55143300
ES.11899.2	chr15	-	2295	2	Intergenic	novelGene_9938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTCTTTGCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	55144143	55141492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55143130_55143485
ES.119.1	chr1	+	172	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAATTAAAA	3455	False	NA	NA	False	NA	NA	NA	13439947	13440119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13439900_13440100
ES.1190.1	chr1	+	1577	5	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	119004726	119028579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119005260_119011508_119011671_119011754_119011883_119020334_119020415_119027905
ES.1190.2	chr1	+	5280	3	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTGTGGCCTGATG	NA	False	NA	NA	False	AATAGA	-21	NA	119010298	119022067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119011671_119011754_119013930_119020334
ES.11900.1	chr15	-	155	1	Intergenic	novelGene_9939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	55164511	55164356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55164400_55164500
ES.11901.1	chr15	+	428	1	Intergenic	novelGene_9940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATAGTACAATGAAT	NA	False	NA	NA	False	NA	NA	NA	55167226	55167654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55167200_55167700
ES.11902.1	chr15	+	6336	48	FSM	ENSMUSG00000022371.17	ENSMUST00000110221.10	5679	48	-59	-598	-59	0	multi-exon	TRUE	canonical	0	0	junction_1	0.593460667275802	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGGATTCTTTTAAC	NA	False	NA	NA	False	AATAAA	-13	NA	55171255	55384197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_55171381_55192551_55192677_55201801_55201919_55205076_55205221_55208265_55208356_55225777_55225934_55226846_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965_55275109_55282083_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55383328
ES.11903.1	chr15	-	181	1	Intergenic	novelGene_9941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	55371285	55371104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55371100_55371300
ES.11904.1	chr15	+	178	1	Antisense	novelGene_ENSMUSG00000022370.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	55415245	55415423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55415200_55415400
ES.11905.1	chr15	+	3209	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	-64	-1	-64	1	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGATTGCATGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	55420739	55489820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.10	chr15	+	4036	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.8743421709141	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGATTGCATGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	55420962	55489820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434739_55440850_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55472902_55474080_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.11	chr15	+	2926	23	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	51.3121423292112	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420969	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55475125_55475224_55481026_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.12	chr15	+	7735	20	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-15	0	intron_retention	FALSE	canonical	1	4	junction_12	44.796863760425	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTTGGATTGCATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	55420975	55489817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449761_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
ES.11905.13	chr15	+	3820	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_2	54.9717717707004	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTGGATTGCATGT	NA	False	NA	NA	False	AATAAA	-14	NA	55420983	55489816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55423793_55423906_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
ES.11905.14	chr15	+	2373	14	NNC	ENSMUSG00000022369.14	novel	3197	17	NA	NA	3	-19991	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	49.9119935545728	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGAGTTCACTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	55420993	55454218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55453296
ES.11905.15	chr15	+	2928	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.943616464049	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420993	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426460_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.16	chr15	+	1542	12	NNC	ENSMUSG00000022369.14	novel	3197	17	NA	NA	7	10583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.7065802016117	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTCATCATTGCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	55420997	55443056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55442679
ES.11905.17	chr15	+	3199	23	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	53.0822105265047	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55421005	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55450071_55450330_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.18	chr15	+	12483	19	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	16	0	intron_retention	FALSE	canonical	2	3	junction_9	45.1755492154061	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTTGGATTGCATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	55421006	55489817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436286_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55474430_55480877_55481145_55483033_55488853_55489533
ES.11905.19	chr15	+	3416	10	ISM	ENSMUSG00000022369.14	ENSMUST00000170046.8	3197	17	16	35467	16	6269	5prime_fragment	FALSE	canonical	3	139	junction_7	24.3127767050806	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTCACCTTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	55421006	55438742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291
ES.11905.2	chr15	+	3217	4	ISM	ENSMUSG00000022369.14	ENSMUST00000170046.8	3197	17	-204	45162	-17	-3426	intron_retention	FALSE	canonical	3	167	junction_1	10.1980390271856	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGGTTTTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	55420786	55429047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332
ES.11905.20	chr15	+	2925	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	42.7764319368937	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55421018	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488847_55489530
ES.11905.21	chr15	+	4297	21	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	32	-1	intron_retention	FALSE	canonical	1	1	junction_16	43.144263813397	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTGGATTGCATGT	NA	False	NA	NA	False	AATAAA	-14	NA	55421022	55489816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55481026_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.22	chr15	+	3198	24	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	68.7476963009807	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55421072	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436286_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55471822_55471968_55472902_55473077_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.23	chr15	+	4389	21	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	-49	0	intron_retention	FALSE	canonical	3	131	junction_13	23.8211565630219	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55421081	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.24	chr15	+	3678	14	ISM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	12280	0	-7092	0	3prime_fragment	FALSE	canonical	3	131	junction_6	22.9944680766957	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55433083	55489819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.26	chr15	+	5421	1	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	10148	-18465	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55450323	55455744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55450300_55455700
ES.11905.27	chr15	+	5953	7	NIC	ENSMUSG00000022369.14	novel	2570	12	NA	NA	-14364	-1	intron_retention	FALSE	canonical	3	147	junction_2	20.9423812717975	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTGGATTGCATGT	8887	False	NA	NA	False	AATAAA	-14	NA	55466618	55489816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55488853_55489533
ES.11905.28	chr15	+	5354	6	NIC	ENSMUSG00000022369.14	novel	2570	12	NA	NA	-10937	0	intron_retention	FALSE	canonical	3	179	junction_3	8.52291030106501	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55470045	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.4	chr15	+	3242	23	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	61.3748979565225	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420813	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55450071_55450330_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55481026_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.5	chr15	+	3975	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	18	0	intron_retention	FALSE	canonical	1	1	junction_18	61.4831798616149	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420821	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436286_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55475125_55475224_55480877_55481145_55483033_55484133_55488786_55488853_55489533
ES.11905.6	chr15	+	3273	16	ISM	ENSMUSG00000022369.14	ENSMUST00000170046.8	3197	17	-168	2799	19	-2799	5prime_fragment	FALSE	canonical	3	131	junction_14	23.5094307318007	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGCTTACTTCCTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	55420822	55471410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039
ES.11905.7	chr15	+	3006	21	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	44.0747943840921	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420832	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ES.11905.8	chr15	+	3859	21	NIC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	31	0	intron_retention	FALSE	canonical	3	131	junction_14	24.4917843367934	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420834	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
ES.11905.9	chr15	+	4122	22	NNC	ENSMUSG00000022369.14	novel	3144	22	NA	NA	31	0	intron_retention	FALSE	canonical	1	2	junction_12	63.0722509788371	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGATTGCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	55420834	55489818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436286_55436365_55440843_55440962_55449706_55449881_55450071_55450330_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55484133_55488786_55488853_55489533
ES.11906.1	chr15	-	961	7	NNC	ENSMUSG00000022370.14	novel	687	4	NA	NA	-22	11768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	356.650622692106	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAGCCAGGTCATTT	NA	False	NA	NA	False	AGTAAA	-16	NA	55420701	55385721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55386147_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ES.11906.10	chr15	-	585	5	NIC	ENSMUSG00000022370.14	novel	730	6	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	439.576500736789	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATGTCTCTTACTGA	NA	False	NA	-2	True	AATAAA	-18	NA	55420726	55397491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55420653
ES.11906.11	chr15	-	8511	4	NIC	ENSMUSG00000022370.14	novel	730	6	NA	NA	23	-2	intron_retention	FALSE	canonical	3	91	junction_2	425.269326427383	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATGTCTCTTACTGA	NA	False	NA	-2	True	AATAAA	-18	NA	55420722	55397491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55402548_55403518_55406781_55418715_55418840_55420653
ES.11906.12	chr15	-	4496	4	NIC	ENSMUSG00000022370.14	novel	730	6	NA	NA	26	-1871	intron_retention	FALSE	canonical	3	91	junction_2	413.441921220166	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAGAAAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-9	NA	55420719	55399360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55403606_55406719_55406781_55418715_55418840_55420653
ES.11906.13	chr15	-	3712	2	NNC	ENSMUSG00000022370.14	novel	6008	2	NA	NA	3922	17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTACATCTTAGATGTA	NA	False	NA	NA	False	NA	NA	NA	55416749	55412832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55415228_55415432
ES.11906.2	chr15	-	3608	1	Intergenic	novelGene_9942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTGGGTTGTGTTATG	NA	False	NA	NA	False	ATTAAA	-17	NA	55392778	55389170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55389200_55392800
ES.11906.3	chr15	-	5494	6	NIC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	22	0	intron_retention	FALSE	canonical	3	905	junction_3	41.4226990911988	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420723	55397489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ES.11906.4	chr15	-	1027	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	195	1	195	-1	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGTCTCTTACTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	55420949	55397490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ES.11906.5	chr15	-	1182	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	-453	1	-54	-1	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGTCTCTTACTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	55421198	55397490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
ES.11906.6	chr15	-	6370	4	NIC	ENSMUSG00000022370.14	novel	730	6	NA	NA	22	-1	intron_retention	FALSE	canonical	3	91	junction_2	413.441921220166	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGTCTCTTACTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	55420723	55397490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55403606_55406719_55406781_55418715_55418840_55420653
ES.11906.7	chr15	-	1038	8	NNC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	445.70256394843	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGTCTCTTACTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	55420709	55397490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55407762_55408014_55411537_55411632_55418715_55418840_55420653
ES.11906.8	chr15	-	8563	5	NIC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	905	junction_2	45.871423566312	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATGTCTCTTACTGA	NA	False	NA	-2	True	AATAAA	-18	NA	55420680	55397491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55402548_55403518_55406781_55411537_55411632_55418715_55418840_55420653
ES.11906.9	chr15	-	6484	5	NIC	ENSMUSG00000022370.14	novel	1223	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	905	junction_2	31.6977917211909	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATGTCTCTTACTGA	NA	False	NA	-2	True	AATAAA	-18	NA	55420744	55397491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ES.11907.1	chr15	-	3486	1	Intergenic	novelGene_9943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACTAAGACACGGGCT	NA	False	NA	NA	False	NA	NA	NA	55444699	55441213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55441200_55444700
ES.11907.2	chr15	-	2530	1	Intergenic	novelGene_9944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTCTTAAAGTTAACAAA	NA	False	NA	NA	False	NA	NA	NA	55444699	55442169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55442200_55444700
ES.11908.1	chr15	+	171	1	Intergenic	novelGene_9946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	55671130	55671301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55671100_55671300
ES.11909.1	chr15	+	5327	1	Intergenic	novelGene_9948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCTACATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	55734967	55740294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55735000_55740300
ES.11909.10	chr15	+	2830	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	396	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTTC	NA	False	NA	NA	False	NA	NA	NA	55736862	55740291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55739127_55739725
ES.11909.11	chr15	+	175	1	Intergenic	novelGene_9955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTCCCCCATAA	NA	False	NA	NA	False	NA	NA	NA	55797374	55797549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55797400_55797500
ES.11909.2	chr15	+	2306	1	Intergenic	novelGene_9949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAAAAATAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	55735028	55737334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55735000_55737300
ES.11909.3	chr15	+	4827	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	55735055	55740287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55735305_55735709
ES.11909.4	chr15	+	2929	1	Intergenic	novelGene_9951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATATTTTAATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	55735055	55737984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55735100_55738000
ES.11909.5	chr15	+	4010	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	55735056	55740289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55738854_55740076
ES.11909.6	chr15	+	3494	3	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	55735056	55740288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55738160_55738674_55738854_55740076
ES.11909.7	chr15	+	3742	1	Intergenic	novelGene_9952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTGCTTTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	55735056	55738798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55735100_55738800
ES.11909.8	chr15	+	3781	2	Antisense	novelGene_ENSMUSG00000060429.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	55735056	55740287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_55738627_55740076
ES.11909.9	chr15	+	5247	2	Intergenic	novelGene_9953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	400	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTGTTGAGACTGAG	NA	False	NA	NA	False	AATAAA	-6	NA	55735058	55869996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_55740290_55869980
ES.1191.1	chr1	-	1247	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCATTTCTCTTTCC	8936	False	NA	NA	False	NA	NA	NA	119044765	119043518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_119043500_119044800
ES.11910.1	chr15	-	3862	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221609	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	6.21992765231236	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	9251	False	NA	0	True	AATAAA	-19	NA	55548097	55499785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55547801
ES.11910.2	chr15	-	4973	7	FSM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	-56	2	-56	-2	multi-exon	FALSE	canonical	0	0	junction_6	17.2916164657906	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	NA	False	NA	0	True	AATAAA	-19	NA	55770401	55499785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55612583_55612792_55655429_55655647_55769419
ES.11910.3	chr15	-	4204	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221050	-7	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	5.67340285895511	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAATGCCTAGGCTTAT	8692	False	NA	-5	True	AATAAA	-14	NA	55548656	55499790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55548013
ES.11910.4	chr15	-	3249	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221668	-556	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	6.21992765231236	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGAGTGTATTTTTTT	9310	False	NA	NA	False	TTTAAA	-18	NA	55548038	55500339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55547801
ES.11910.5	chr15	-	1325	5	NNC	ENSMUSG00000060429.13	novel	4919	7	NA	NA	221684	-2464	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	6.21992765231236	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGAAGCAGCT	9326	False	NA	NA	False	AATACA	-9	NA	55548022	55502247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55547801
ES.11910.6	chr15	-	1560	1	Intergenic	novelGene_9945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCTTCTAGAGATTT	NA	False	NA	NA	False	NA	NA	NA	55532317	55530757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55530800_55532300
ES.11910.7	chr15	-	332	1	Intergenic	novelGene_9947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTCTTAAAGAGAATGATT	NA	False	NA	NA	False	NA	NA	NA	55731499	55731167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55731200_55731500
ES.11910.8	chr15	-	2865	1	Intergenic	novelGene_9950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATTGTTGCGACAC	NA	False	NA	NA	False	NA	NA	NA	55737920	55735055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55735100_55737900
ES.11910.9	chr15	-	1904	1	Intergenic	novelGene_9954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGCTACAATCATAAAATA	NA	False	NA	NA	False	NA	NA	NA	55737920	55736016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_55736000_55737900
ES.11911.1	chr15	-	177	1	Intergenic	novelGene_9956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACATTCTGAATGT	NA	False	NA	NA	False	NA	NA	NA	56589343	56589166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_56589200_56589300
ES.11912.1	chr15	+	176	1	Intergenic	novelGene_9957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAGAAATGATT	NA	False	NA	NA	False	NA	NA	NA	56978393	56978569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_56978400_56978600
ES.11913.1	chr15	+	173	1	Intergenic	novelGene_9958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTTCTAAAACTGCA	NA	False	NA	NA	False	NA	NA	NA	57111502	57111675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57111500_57111700
ES.11914.1	chr15	+	1783	3	ISM	ENSMUSG00000071757.11	ENSMUST00000096430.11	4376	4	-3	17435	-3	1287	5prime_fragment	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGCTCTCCCATCAC	NA	False	NA	NA	False	NA	NA	NA	57558057	57685793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57558401_57626041_57626116_57684427
ES.11914.2	chr15	+	4379	4	FSM	ENSMUSG00000071757.11	ENSMUST00000096430.11	4376	4	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTCCCTGTTCTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	57558057	57703228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_57558401_57626041_57626116_57684427_57687148_57701986
ES.11914.3	chr15	+	183	1	Intergenic	novelGene_9959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAACCCATCT	NA	False	NA	NA	False	NA	NA	NA	57623325	57623508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57623300_57623500
ES.11914.4	chr15	+	4553	1	Intergenic	novelGene_9960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACATAATTCGCAGCCAC	NA	False	NA	NA	False	NA	NA	NA	57632617	57637170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57632600_57637200
ES.11914.5	chr15	+	156	1	Intergenic	novelGene_9961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTATATGAC	NA	False	NA	NA	False	NA	NA	NA	57691314	57691470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57691300_57691500
ES.11915.1	chr15	-	624	1	Intergenic	novelGene_9962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	136	False	NA	NA	False	NA	NA	NA	57695968	57695344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57695300_57696000
ES.11916.1	chr15	-	3050	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-129	254	-129	-254	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTACCTTTGCGGTG	NA	False	NA	12	True	ATTAAA	-30	NA	57755973	57733151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.10	chr15	-	2969	8	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-6	-271	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	148.752773940865	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTCTGTGTTAAGTT	NA	False	NA	-5	True	ATTAAA	-13	NA	57755850	57733168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57739004_57740813_57740926_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.11	chr15	-	3936	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-18	-271	intron_retention	FALSE	canonical	3	365	junction_4	37.0075067460043	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTCTGTGTTAAGTT	NA	False	NA	-5	True	ATTAAA	-13	NA	57755862	57733168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.13	chr15	-	2944	7	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-44	-273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.746769516404	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTGTCTGTGTTAAG	NA	False	NA	-7	True	ATTAAA	-11	NA	57755888	57733170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ES.11916.14	chr15	-	2363	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	85	727	85	-727	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAAATGTGTTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	57755759	57733624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.15	chr15	-	2275	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	49	851	49	-851	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGGAAGGGGGAGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57755795	57733748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.16	chr15	-	2283	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-125	1017	-125	-1017	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGTTGTCATTCTGA	NA	False	NA	-1	True	AATAAA	-33	NA	57755969	57733914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.17	chr15	-	1684	5	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	10343	-1033	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	202.362762137702	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTTATATAGTTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	57743447	57733930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57743395
ES.11916.18	chr15	-	3085	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-21	-1035	intron_retention	FALSE	canonical	3	382	junction_5	37.3292408471191	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCTTTATATAGTTAC	NA	False	NA	-19	True	AATAAA	-15	NA	57755865	57733932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57743461_57746830_57746943_57755538
ES.11916.19	chr15	-	2159	7	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-21	-1035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.746769516404	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCTTTATATAGTTAC	NA	False	NA	-19	True	AATAAA	-15	NA	57755865	57733932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ES.11916.20	chr15	-	2045	7	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	84	-1035	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	168.746769516404	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCTTTATATAGTTAC	NA	False	NA	-19	True	AATAAA	-15	NA	57755760	57733932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741993_57743395_57743461_57746830_57746943_57755538
ES.11916.21	chr15	-	5559	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-50	-1036	intron_retention	FALSE	canonical	3	365	junction_5	41.7199659102876	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCTTTATATAGTTA	NA	False	NA	-20	True	AATAAA	-14	NA	57755894	57733933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57746943_57755538
ES.11916.22	chr15	-	1286	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	-130	2019	-130	142	multi-exon	FALSE	canonical	3	365	junction_5	42.5977866628236	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATTTTCTGGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	57755974	57734916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.24	chr15	-	1157	7	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-6	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.746769516404	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTCATTTTCTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	57755850	57734919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ES.11916.26	chr15	-	4477	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-21	72	intron_retention	FALSE	canonical	3	365	junction_5	41.7199659102876	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATGATTCTCATTCAA	NA	False	NA	NA	False	AATACA	-13	NA	57755865	57734986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57746943_57755538
ES.11916.27	chr15	-	4472	2	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-65	-7783	intron_retention	FALSE	canonical	3	442	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-34	NA	57755909	57742841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57746943_57755538
ES.11916.3	chr15	-	4715	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	5	-265	intron_retention	FALSE	canonical	3	365	junction_4	45.5948340153672	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTTAAGTTTCCGTA	NA	False	NA	1	True	ATTAAA	-19	NA	57755839	57733162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.4	chr15	-	3956	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-126	-269	intron_retention	FALSE	canonical	3	382	junction_5	37.3292408471191	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755970	57733166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57743461_57746830_57746943_57755538
ES.11916.5	chr15	-	5736	6	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-6	-269	intron_retention	FALSE	canonical	3	365	junction_3	38.7473870086745	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755850	57733166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11916.6	chr15	-	4717	6	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-3	-269	intron_retention	FALSE	canonical	0	0	junction_3	181.659461630822	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755847	57733166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57740867_57741880_57742002_57743395_57743461_57746830_57746943_57755538
ES.11916.7	chr15	-	6298	7	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-22	-269	intron_retention	FALSE	canonical	3	365	junction_5	41.7199659102876	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755866	57733166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57746943_57755538
ES.11916.8	chr15	-	5661	6	NIC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	-21	-269	intron_retention	FALSE	canonical	3	382	junction_4	40.8489901955972	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTCTGTGTTAAGTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	57755865	57733166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57735303_57738892_57740867_57741880_57741977_57742444_57743461_57746830_57746943_57755538
ES.11916.9	chr15	-	2735	8	NNC	ENSMUSG00000022365.7	novel	3175	8	NA	NA	109	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	154.145041689803	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTCTGTGTTAAGTT	NA	False	NA	-5	True	ATTAAA	-13	NA	57755735	57733168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57735303_57738892_57738944_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ES.11917.1	chr15	+	158	1	Intergenic	novelGene_9963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	57772551	57772709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57772600_57772700
ES.11918.1	chr15	+	3569	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775537	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.10	chr15	+	5545	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	2	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	79.4804807132193	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775596	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.11	chr15	+	5612	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	82.0398683567934	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775596	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803482_57803649_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818717_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.12	chr15	+	3339	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	-163	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGCATTGATTTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	57775598	57833294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.13	chr15	+	3472	22	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	94.5867728404553	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775605	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57826148_57826236_57827199_57827321_57831304_57831401_57833119
ES.11918.14	chr15	+	3205	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_19	47.7117383072465	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775605	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
ES.11918.15	chr15	+	2912	18	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	11	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	73.8306769448275	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57775605	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
ES.11918.16	chr15	+	4967	9	NNC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	11	-7392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.097361906693	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCAGATGGTCAGAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	57775605	57809908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57808119_57808230
ES.11918.17	chr15	+	5485	14	NNC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_4	88.5884040122847	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTCTGCATGTAATTG	NA	False	NA	2	True	AATAAA	-16	NA	57775606	57822798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.2	chr15	+	3343	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	-26	-6	-26	0	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775568	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.21	chr15	+	5710	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	89.2301938807711	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	False	NA	10	True	AATAAA	-17	NA	57775627	57833459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.23	chr15	+	3553	23	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.8017582986274	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775627	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57778128_57778203_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.24	chr15	+	3228	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	65.0048267438657	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775627	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818717_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.25	chr15	+	3143	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_17	63.6157962229969	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775627	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57827199_57827321_57831304_57831401_57833119
ES.11918.26	chr15	+	3127	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	84.1357562797444	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775628	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817039_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.27	chr15	+	2624	15	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-1	5490	-1	8	5prime_fragment	FALSE	canonical	3	200	junction_2	26.2309211521402	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATGTAGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	57775628	57817308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ES.11918.28	chr15	+	3441	18	NNC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.9542190614616	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTCTGCATGTAATT	NA	False	NA	1	True	AATAAA	-15	NA	57775628	57822797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57821937
ES.11918.29	chr15	+	3443	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	89.961811342369	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57775628	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821910_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.3	chr15	+	3222	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775568	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.30	chr15	+	3309	22	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	77.8052980142932	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775628	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816313_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.31	chr15	+	3098	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	4502	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	55.0954849817475	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCACTCTCTTCTGTTGC	NA	False	NA	NA	False	GATAAA	-1	NA	57775628	57827380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ES.11918.32	chr15	+	5873	22	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.954183082812	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775628	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57789185_57789352_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.33	chr15	+	1807	7	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	0	20606	0	-15108	5prime_fragment	FALSE	canonical	3	200	junction_2	30.6739121875396	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCATAGTTACTACTT	NA	False	NA	NA	False	CATAAA	-12	NA	57775629	57802192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297
ES.11918.34	chr15	+	3209	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	80.6342585785328	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775629	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.35	chr15	+	5527	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.736306413158	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775630	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
ES.11918.36	chr15	+	5954	23	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	97.4886409996926	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775631	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57828174_57828309_57831304_57831401_57833119
ES.11918.38	chr15	+	5700	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	99.371776677284	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775632	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803482_57803649_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.39	chr15	+	5616	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	64.9357374640498	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATCAAAGCTGAACTG	NA	False	NA	3	True	AATAAA	-10	NA	57775634	57833452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803530_57803699_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.4	chr15	+	3713	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	-58	-102	-23	22	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAAGTCCAGGGGCCTG	NA	False	NA	104	True	ATTAAA	-20	NA	57775571	57822900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.40	chr15	+	3834	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	6	-287	1	207	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGAACTCCTGGGGG	NA	False	NA	NA	False	NA	NA	NA	57775635	57823085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.41	chr15	+	3234	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.6556534365067	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775635	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57778128_57778203_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.42	chr15	+	3604	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	84.2394652167261	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775637	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824637_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.43	chr15	+	3391	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	65.0048267438657	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775637	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817161_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.44	chr15	+	3366	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_20	64.8148131216931	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775637	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57833119
ES.11918.45	chr15	+	5620	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.9357374640498	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	False	NA	10	True	AATAAA	-17	NA	57775638	57833459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.46	chr15	+	3055	19	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_2	65.5982205796002	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775638	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
ES.11918.47	chr15	+	3266	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	90.6556534365067	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775638	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57777250_57777367_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.48	chr15	+	5475	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	93.7507156020703	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775638	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803489_57803656_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.49	chr15	+	5622	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.9357374640498	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57775638	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803482_57803649_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.5	chr15	+	5876	22	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-17	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	77.9810140274723	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775577	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803482_57803649_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.51	chr15	+	3495	16	NIC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	4	-13	intron_retention	FALSE	canonical	3	38	junction_2	56.6190388081214	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAATTAAAAAAA	NA	False	NA	69	True	NA	NA	NA	57775638	57822865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.52	chr15	+	6274	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	96.1366085318179	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775638	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803485_57803652_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57826236_57827199_57827321_57831304_57831401_57833119
ES.11918.53	chr15	+	3531	7	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	9	18873	4	-13375	5prime_fragment	FALSE	canonical	3	200	junction_2	30.6739121875396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATAAATTAAAAACTAACT	NA	False	NA	NA	False	TATAAA	-10	NA	57775638	57803925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297
ES.11918.54	chr15	+	2781	3	NIC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	5	5494	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	129	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTTGTTTTTAGAGT	NA	False	NA	NA	False	TATAAA	-22	NA	57775639	57788838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352
ES.11918.57	chr15	+	3118	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	79.2380613096434	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775643	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.58	chr15	+	5773	16	NNC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_6	80.2489459951552	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTCTGCATGTAATT	NA	False	NA	1	True	AATAAA	-15	NA	57775643	57822797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.6	chr15	+	3162	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	-16	165	-16	-165	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATGGCATTGATTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	57775578	57833292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.60	chr15	+	2888	4	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	19	33960	14	5494	5prime_fragment	FALSE	canonical	3	200	junction_2	41.9947086613963	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTTGTTTTTAGAGT	NA	False	NA	NA	False	TATAAA	-22	NA	57775648	57788838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352
ES.11918.61	chr15	+	2968	19	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	68.0425837977699	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775648	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.63	chr15	+	3009	19	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	82.251571338512	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775649	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.65	chr15	+	5318	19	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.8183857184953	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775649	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.66	chr15	+	6502	10	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	20	11718	15	-6220	5prime_fragment	FALSE	canonical	3	200	junction_2	29.4182273219416	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATTTATTTACTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	57775649	57811080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928
ES.11918.67	chr15	+	7918	19	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	23	3	intron_retention	TRUE	non_canonical	0	0	junction_7	85.2863187905276	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57775657	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803465_57803632_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816885_57817037_57818668_57818805_57821732_57824380_57827199_57827321_57833119
ES.11918.68	chr15	+	5791	22	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	24	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	90.0179876204645	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775658	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803516_57803683_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.69	chr15	+	3230	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	64.8592900053647	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775660	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824365_57827199_57827321_57831304_57831401_57833119
ES.11918.7	chr15	+	3392	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	75.3023240013215	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAACTGTCTTCT	NA	False	NA	9	True	AATAAA	-16	NA	57775593	57833458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.70	chr15	+	3491	17	NNC	ENSMUSG00000022364.15	novel	3468	18	NA	NA	29	0	intron_retention	FALSE	canonical	2	3	junction_9	62.7832332314926	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTCTGCATGTAATTG	NA	False	NA	2	True	AATAAA	-16	NA	57775663	57822798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.72	chr15	+	3299	21	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	65.0048267438657	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57775677	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818596_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.73	chr15	+	3051	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	79.5549950029343	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775689	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818717_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.74	chr15	+	5271	19	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.3277219898926	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	2106	False	NA	8	True	AATAAA	-15	NA	57779419	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.75	chr15	+	5444	20	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	3997	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.9309258584389	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	6092	False	NA	14	True	AATAAA	-21	NA	57783405	57833463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.76	chr15	+	5069	18	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	7081	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.1652277183623	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	9176	False	NA	7	True	AATAAA	-14	NA	57786489	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57786532_57795927_57796080_57799486_57799647_57801297_57803489_57803656_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.77	chr15	+	3769	17	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	19987	981	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	86.9689015898787	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTCAAGTTCTAAAACGC	NA	False	NA	NA	False	NA	NA	NA	57799395	57834444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.78	chr15	+	2602	16	ISM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	23817	-3	20003	3	3prime_fragment	FALSE	canonical	3	200	junction_4	37.4619214076848	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57799411	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.8	chr15	+	2542	14	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	60.2407399154603	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATGTAGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	57775594	57817308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ES.11918.80	chr15	+	4260	15	NNC	ENSMUSG00000022364.15	novel	914	6	NA	NA	-19964	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.8040784175284	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAGCTGAACTGTCT	NA	False	NA	6	True	AATAAA	-13	NA	57801844	57833455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803543_57803711_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818673_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57833119
ES.11918.81	chr15	+	6253	13	NNC	ENSMUSG00000022364.15	novel	914	6	NA	NA	-19731	0	intron_retention	TRUE	non_canonical	0	0	junction_1	82.2389388036808	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57802077	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803514_57803681_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57824380_57827199_57827321_57833119
ES.11918.82	chr15	+	3185	11	NNC	ENSMUSG00000022364.15	novel	914	6	NA	NA	-19575	-843	intron_retention	FALSE	canonical	0	0	junction_1	99.8739705829302	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCAGAATGCATATGT	NA	False	NA	NA	False	NA	NA	NA	57802233	57821955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803543_57803711_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.83	chr15	+	3732	15	NNC	ENSMUSG00000022364.15	novel	914	6	NA	NA	-19527	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.9565860743295	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57802281	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803516_57803683_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.84	chr15	+	3192	11	NNC	ENSMUSG00000022364.15	novel	914	6	NA	NA	-18788	0	intron_retention	FALSE	canonical	0	0	junction_1	113.526428641088	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTCTGCATGTAATTG	NA	False	NA	2	True	AATAAA	-16	NA	57803020	57822798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803543_57803711_57804196_57805765_57805846_57805956_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818717_57818805_57821732
ES.11918.85	chr15	+	3646	8	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-18538	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	88.2487208671824	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGAAAAAATCTTCC	NA	False	NA	NA	False	AATAAA	-10	NA	57803270	57817294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57803482_57803649_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883
ES.11918.86	chr15	+	2431	6	ISM	ENSMUSG00000022364.15	ENSMUST00000162157.2	3727	14	24610	1826	-17790	-513	intron_retention	FALSE	canonical	3	200	junction_2	18.514858897653	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGTTCTAGATTTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	57804018	57816787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028
ES.11918.87	chr15	+	5731	7	ISM	ENSMUSG00000022364.15	ENSMUST00000159801.8	3583	17	32248	81	-13160	-1	3prime_fragment	FALSE	canonical	3	231	junction_6	13.4339950209244	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTCTGCATGTAATT	NA	False	NA	1	True	AATAAA	-15	NA	57808648	57822797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
ES.11918.88	chr15	+	4714	11	ISM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	33794	1	-12420	-1	3prime_fragment	FALSE	canonical	3	202	junction_8	40.9596142559961	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGCTGAACTGTCTT	NA	False	NA	7	True	AATAAA	-14	NA	57809388	57833456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.89	chr15	+	1794	11	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-7418	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.46538977736	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57814390	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57814505_57815034_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.90	chr15	+	3132	4	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	202	junction_1	64.1162139313363	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57821802	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57824380_57827199_57827321_57831304_57831401_57833119
ES.11918.91	chr15	+	5466	3	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	480	0	intron_retention	FALSE	canonical	3	284	junction_1	37.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57822288	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57827321_57831304_57831401_57833119
ES.11918.92	chr15	+	1736	5	ISM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	1585	6	1585	0	3prime_fragment	FALSE	canonical	3	77	junction_1	124.364383969045	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57823393	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
ES.11918.93	chr15	+	5214	2	NIC	ENSMUSG00000022364.15	novel	914	6	NA	NA	4719	3	intron_retention	FALSE	canonical	3	359	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGAACTGTCTTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	57826527	57833460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57831401_57833119
ES.11918.94	chr15	+	1991	3	ISM	ENSMUSG00000022364.15	ENSMUST00000161329.2	914	6	4955	-994	4955	994	3prime_fragment	FALSE	canonical	3	284	junction_1	37.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGCTGTGGTTCCACCT	NA	False	NA	NA	False	NA	NA	NA	57826763	57834457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_57827321_57831304_57831401_57833119
ES.11918.95	chr15	+	660	2	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	5190	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57826998	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57827321_57833119
ES.11918.96	chr15	+	527	3	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	8757	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	173	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57830565	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57830659_57831304_57831401_57833119
ES.11918.97	chr15	+	1871	1	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	9778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57831586	57833457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_57831600_57833500
ES.11918.98	chr15	+	559	2	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	10950	2	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	False	NA	10	True	AATAAA	-17	NA	57832758	57833459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57832978_57833119
ES.11919.1	chr15	-	234	1	Intergenic	novelGene_9964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCAATTTCCAGTACT	NA	False	NA	NA	False	NA	NA	NA	57790306	57790072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57790100_57790300
ES.1192.1	chr1	+	3540	2	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAGGTAAAGAACTTAC	NA	False	NA	NA	False	NA	NA	NA	119051668	119055353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119052965_119053109
ES.11920.1	chr15	+	434	1	Intergenic	novelGene_9967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTATTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	57837478	57837912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57837500_57837900
ES.11921.1	chr15	-	5133	1	Intergenic	novelGene_9965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGTGGCTAGCACCTAG	NA	False	NA	NA	False	NA	NA	NA	57840648	57835515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57835500_57840600
ES.11921.2	chr15	-	2929	3	Intergenic	novelGene_9966	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAAAACCCTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	57841280	57837150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57839652_57839752_57840113_57841212
ES.11921.3	chr15	-	646	2	Intergenic	novelGene_9968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTTATTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	57839453	57837901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57838339_57839244
ES.11921.4	chr15	-	3085	2	Intergenic	novelGene_9970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCACAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	57841064	57837909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57839683_57839752
ES.11921.5	chr15	-	2225	3	Intergenic	novelGene_9969	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	2.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCACAAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	57840741	57837909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57839652_57839752_57840113_57840618
ES.11922.1	chr15	+	2612	4	FSM	ENSMUSG00000051225.10	ENSMUST00000160942.8	2876	4	-39	303	-39	-303	multi-exon	FALSE	canonical	2	2	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCCTGGACCTGATGG	9174	False	NA	NA	False	NA	NA	NA	57848775	57874102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_57849938_57856302_57856471_57858609_57858735_57872945
ES.11922.2	chr15	+	1543	2	NNC	ENSMUSG00000051225.10	novel	529	2	NA	NA	-20	-303	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCCTGGACCTGATGG	NA	False	NA	NA	False	NA	NA	NA	57865521	57874102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57865908_57872945
ES.11922.3	chr15	+	1323	2	NNC	ENSMUSG00000051225.10	novel	2876	4	NA	NA	7005	-320	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATTAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	57872546	57874085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_57872730_57872945
ES.11923.1	chr15	-	1451	2	Antisense	novelGene_ENSMUSG00000051225.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGACTTTGTGTTTGC	NA	False	NA	NA	False	AAGAAA	-23	NA	57849919	57847285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_57848659_57849841
ES.11924.1	chr15	-	3995	5	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	27	8	intron_retention	FALSE	canonical	3	51	junction_3	307.246236754822	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTCTCAGCTTTGTTG	NA	False	NA	-1	True	NA	NA	NA	57897559	57885646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
ES.11924.10	chr15	-	994	4	NIC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	1778	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	402.427909348025	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCTCTCCCAGGTA	NA	False	NA	-26	True	AATAAA	-23	NA	57895808	57885671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57885960_57888669_57888803_57894352_57894497_57895379
ES.11924.11	chr15	-	1507	7	Fusion	ENSMUSG00000101892.2_ENSMUSG00000022361.15	novel	1341	6	NA	NA	9	-6	multi-exon	FALSE	canonical	3	7	junction_5	375.325969436347	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCTCTCCCAGGTA	NA	False	NA	-26	True	AATAAA	-23	NA	57939856	57885671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57932714_57932826_57939552
ES.11924.12	chr15	-	1651	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	296.15712046142	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCTCTCCCAGGTA	NA	False	NA	-26	True	AATAAA	-23	NA	57897720	57885671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57886278_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ES.11924.13	chr15	-	1251	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	1704	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	333.705618771995	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAACTCTCTCCCAGGT	NA	False	NA	-27	True	AATAAA	-22	NA	57895882	57885672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57895722
ES.11924.15	chr15	-	4082	4	NIC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	34	-9	intron_retention	FALSE	canonical	3	703	junction_3	107.506072179926	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAAACTCTCTCCCAG	NA	False	NA	-29	True	AATAAA	-20	NA	57897677	57885674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57885960_57888669_57888803_57892009_57895476_57897479
ES.11924.18	chr15	-	210	1	Intergenic	novelGene_9971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAAAGGTAAACAATTA	NA	False	NA	NA	False	NA	NA	NA	57899462	57899252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57899300_57899500
ES.11924.19	chr15	-	5185	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	28	-1	8	1	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGATTTTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	57939857	57910397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
ES.11924.2	chr15	-	1397	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	-50	-6	-40	6	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCTCTCAGCTTTGT	NA	False	NA	-3	True	NA	NA	NA	57897761	57885648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ES.11924.20	chr15	-	5074	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	-10	-300	10	-2	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTGAGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	57939875	57910400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ES.11924.21	chr15	-	4820	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	-54	-2	18	2	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGTGGTCTGAGTTTT	NA	False	NA	1	True	ATTAAA	-23	NA	57939919	57910698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ES.11924.22	chr15	-	4769	4	NNC	ENSMUSG00000022361.15	novel	4764	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4181471413663	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAATGTGGTCTGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	57939853	57910700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57912182_57915619_57918479_57932714_57932843_57939552
ES.11924.23	chr15	-	4901	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	6	305	6	-3	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTAATGTGGTCTGA	NA	False	NA	-4	True	ATTAAA	-18	NA	57939879	57910703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
ES.11924.24	chr15	-	3530	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	18	1216	18	-1216	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGATGGAAACCTTGTGA	NA	False	NA	NA	False	AATACA	-17	NA	57939847	57911916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ES.11924.25	chr15	-	3649	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	45	1518	25	-1216	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGATGGAAACCTTGTGA	NA	False	NA	NA	False	AATACA	-17	NA	57939840	57911916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
ES.11924.26	chr15	-	4782	3	ISM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	28	3392	28	2283	5prime_fragment	FALSE	canonical	3	28	junction_1	5.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTTGTCATGAAATGC	NA	False	NA	NA	False	AATAAA	-21	NA	57939837	57914092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_57918479_57932714_57932826_57939552
ES.11924.3	chr15	-	977	4	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	-1345	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	429.893009945498	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGCTGCTCTCAGCT	NA	False	NA	-7	True	AATAAA	-42	NA	57892636	57885652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57892530
ES.11924.4	chr15	-	1459	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	316.693795329179	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGCTGCTCTCAGCT	NA	False	NA	-7	True	AATAAA	-42	NA	57897739	57885652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
ES.11924.5	chr15	-	4885	2	ISM	ENSMUSG00000101892.2_ENSMUSG00000022362.14	ENSMUST00000187062.2	1672	4	-1969	0	-1969	0	intron_retention	FALSE	canonical	3	966	junction_1	0	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	-20	True	AATAAA	-29	NA	57893260	57885665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_57885960_57888669
ES.11924.7	chr15	-	1078	5	NIC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	-22	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	372.661374440658	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCTCCCAGGTAA	NA	False	NA	-25	True	AATAAA	-24	NA	57897608	57885670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57885960_57888669_57888803_57892009_57892441_57895379_57895476_57897479
ES.11924.8	chr15	-	1281	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	49	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.54719691813	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCTCTCCCAGGTA	NA	False	NA	-26	True	AATAAA	-23	NA	57897662	57885671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57885966_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ES.11924.9	chr15	-	1162	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	342	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	334.836079298513	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCTCTCCCAGGTA	NA	False	NA	-26	True	AATAAA	-23	NA	57897244	57885671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897174
ES.11925.1	chr15	+	212	1	Intergenic	novelGene_9974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAGGACCTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	57954921	57955133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57954900_57955100
ES.11925.10	chr15	+	1415	6	NIC	ENSMUSG00000022359.11	novel	1383	6	NA	NA	-32	-8	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.2283702200806	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAATTTTGCTTTTGA	2628	False	NA	19	True	AATAAA	-9	NA	58004740	58022042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58004978_58011729_58011838_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ES.11925.11	chr15	+	1405	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	-24	2	-24	-2	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTTTTGAAGAATC	2636	False	NA	25	True	AATAAA	-15	NA	58004748	58022048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ES.11925.12	chr15	+	1220	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-3	-419	-3	-2	multi-exon	FALSE	canonical	3	22	junction_3	18.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTTTTGAAGAATC	2672	False	NA	25	True	AATAAA	-15	NA	58004784	58022048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
ES.11925.13	chr15	+	5553	4	NNC	ENSMUSG00000022359.11	novel	798	5	NA	NA	-8	2	intron_retention	FALSE	canonical	0	0	junction_2	31.3297870333578	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGTGCCCTTTTTTTC	2712	False	NA	40	True	AATAAA	-30	NA	58004824	58022063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58004978_58011729_58012243_58012979_58017101_58021297
ES.11925.14	chr15	+	4408	1	FSM	ENSMUSG00000080461.3	ENSMUST00000116811.3	127	1	-2046	-2235	-2046	2235	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTTAGAGTCATGT	5853	False	NA	NA	False	NA	NA	NA	58007965	58012373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58008000_58012400
ES.11925.15	chr15	+	3459	1	NIC	ENSMUSG00000022359.11	novel	1383	6	NA	NA	-695	617	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58015879	58019338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58015900_58019300
ES.11925.2	chr15	+	157	2	Antisense	novelGene_ENSMUSG00000022360.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTATTA	NA	False	NA	NA	False	NA	NA	NA	57954925	57986886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_57955039_57986842
ES.11925.3	chr15	+	176	2	Intergenic	novelGene_9975	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGAGACTTTC	NA	False	NA	NA	False	NA	NA	NA	57954925	58023408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57955080_58023386
ES.11925.5	chr15	+	1300	3	Antisense	novelGene_ENSMUSG00000022360.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57971824	57975532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_57972013_57973342_57973434_57974511
ES.11925.6	chr15	+	3736	1	Antisense	novelGene_ENSMUSG00000022360.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCAACAAAGTAAATAATC	NA	False	NA	NA	False	NA	NA	NA	57971824	57975560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_57971800_57975600
ES.11925.7	chr15	+	2579	1	Antisense	novelGene_ENSMUSG00000022360.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGCTGGTGAGATGG	7744	False	NA	NA	False	NA	NA	NA	57983908	57986487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_57983900_57986500
ES.11925.8	chr15	+	833	1	Intergenic	novelGene_9976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGGCTTACC	2263	False	NA	NA	False	NA	NA	NA	57988246	57989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_57988200_57989100
ES.11925.9	chr15	+	1228	1	Antisense	novelGene_ENSMUSG00000022360.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAACCAAAACAAA	9951	False	NA	NA	False	NA	NA	NA	57995934	57997162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_57995900_57997200
ES.11926.1	chr15	-	206	1	Intergenic	novelGene_9972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTTAACATATGTCATT	NA	False	NA	NA	False	NA	NA	NA	57950853	57950647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57950600_57950900
ES.11926.11	chr15	-	7366	26	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	16	1	intron_retention	FALSE	canonical	3	283	junction_23	32.7749660564279	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998462	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.12	chr15	-	5649	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.850279596659	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998463	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971571_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.14	chr15	-	4019	26	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.9286417938475	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998486	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57957640_57961828_57962132_57963102_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.15	chr15	-	5684	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	73.1348229775774	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998468	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979252_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.16	chr15	-	5796	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_9	70.4675936571549	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998486	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968769_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.17	chr15	-	9591	26	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-1	1	intron_retention	FALSE	canonical	3	283	junction_23	32.3621012914798	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998479	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57979243_57980163_57980280_57980633_57980743_57981740_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.18	chr15	-	5663	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	72.7080148152963	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998467	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989536_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.19	chr15	-	7463	26	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	1	intron_retention	FALSE	canonical	2	16	junction_7	72.8869151494286	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998456	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57967963_57968769_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.2	chr15	-	179	2	Intergenic	novelGene_9973	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	543	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	58002612	57950674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_57950796_58002554
ES.11926.20	chr15	-	5663	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	73.1348229775774	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTCTAGTTCTTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	57998463	57957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980170_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.22	chr15	-	10165	23	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	0	intron_retention	FALSE	canonical	3	283	junction_20	33.4323357601614	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998456	57957441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.23	chr15	-	5720	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	95.7878457084172	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998514	57957441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971571_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977676_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.26	chr15	-	4000	25	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.0785993988067	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998440	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958082_57963212_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.27	chr15	-	5503	27	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	74.3530678467597	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998458	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.28	chr15	-	5669	16	NNC	ENSMUSG00000022360.9	novel	3472	21	NA	NA	-1897	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	94.0041606644207	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57977451	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57975479_57976580
ES.11926.29	chr15	-	5827	27	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-31	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	73.912230053485	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998509	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984336_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.31	chr15	-	5653	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-45	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	73.1632895721282	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998523	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969002_57970138_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.32	chr15	-	5486	27	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	73.713462516782	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998478	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.34	chr15	-	5304	26	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	74.518980132581	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998456	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.35	chr15	-	5648	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	114.100069188199	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCGTTTCTAGTTCTTG	NA	False	NA	-12	True	AATAAA	-19	NA	57998464	57957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971710_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985851_57985999_57989137_57989226_57989443_57989547_57989944_57990105_57991604_57991652_57995588_57995738_57998202
ES.11926.37	chr15	-	5728	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.0716618400072	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCGTTTCTAGTTCTT	NA	False	NA	-13	True	AATAAA	-18	NA	57998456	57957443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966525_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.39	chr15	-	5439	27	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.9917235096534	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACTCGTTTCTAGTTCT	NA	False	NA	-14	True	AATAAA	-17	NA	57998467	57957444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969003_57971464_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.4	chr15	-	5896	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-210	-2	-210	0	multi-exon	FALSE	canonical	3	283	junction_25	31.7407623492731	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57998688	57957439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.40	chr15	-	9894	25	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	20	-3	intron_retention	FALSE	canonical	3	283	junction_22	33.3340624920249	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACTCGTTTCTAGTTCT	NA	False	NA	-14	True	AATAAA	-17	NA	57998458	57957444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57965933_57966593_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.41	chr15	-	5602	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	72.4284235863924	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACTCGTTTCTAGTTCT	NA	False	NA	-14	True	AATAAA	-17	NA	57998456	57957444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990054_57991604_57991652_57995588_57995738_57998202
ES.11926.44	chr15	-	5490	27	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	97.8763257786529	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTACTCGTTTCTAGTTC	NA	False	NA	-15	True	AATAAA	-16	NA	57998470	57957445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989562_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.49	chr15	-	5624	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	32	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.1190471883243	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTACTCGTTTCTAGTT	NA	False	NA	-16	True	AATAAA	-15	NA	57998446	57957446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974650_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.50	chr15	-	5721	29	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.9719006525083	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTACTCGTTTCTA	NA	False	NA	-19	True	AATAAA	-12	NA	57998456	57957449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959611_57959679_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.52	chr15	-	5661	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	72.4284235863924	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTACTCGTTTCTA	NA	False	NA	-19	True	AATAAA	-12	NA	57998462	57957449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990105_57991597_57991652_57995588_57995738_57998202
ES.11926.53	chr15	-	5113	29	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	23	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.2896178903229	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTACTCGTTTCTA	NA	False	NA	-19	True	AATAAA	-12	NA	57998455	57957449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958202_57958844_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968769_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.55	chr15	-	3820	15	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	97.1211372777443	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTGTTACTCGTTTCT	NA	False	NA	-20	True	AATAAA	-11	NA	57998472	57957450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57971726_57995632_57995738_57998202
ES.11926.58	chr15	-	5073	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	1	610	1	-610	multi-exon	FALSE	canonical	3	283	junction_25	31.7407623492731	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCATTTGCTTCTTCCA	NA	False	NA	NA	False	AATACA	-13	NA	57998477	57958051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.59	chr15	-	4954	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-54	784	-54	574	multi-exon	FALSE	canonical	3	283	junction_25	31.7407623492731	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTTTTTTTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	57998532	57958225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.6	chr15	-	5732	28	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.9684149119326	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57998485	57957439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966830_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.60	chr15	-	7477	19	NIC	ENSMUSG00000022360.9	novel	3472	21	NA	NA	-1400	569	intron_retention	FALSE	canonical	3	313	junction_17	24.3482957549977	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	57984111	57958230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57979243_57980163_57980280_57980633_57980743_57981740
ES.11926.61	chr15	-	5087	27	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	565	intron_retention	FALSE	canonical	3	283	junction_24	31.709853246261	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAAAACACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	57998456	57958234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.62	chr15	-	6554	26	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	-1	530	intron_retention	FALSE	canonical	3	283	junction_23	32.7749660564279	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATGGCTATAAATATAA	NA	False	NA	NA	False	NA	NA	NA	57998479	57958269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.63	chr15	-	4805	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	-27	906	-27	452	multi-exon	FALSE	canonical	3	283	junction_25	31.7407623492731	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGACTAGTTTTTGTAT	NA	False	NA	NA	False	TTTAAA	-39	NA	57998505	57958347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.64	chr15	-	11078	9	NIC	ENSMUSG00000022360.9	novel	3472	21	NA	NA	-1400	1966	intron_retention	FALSE	canonical	3	313	junction_7	24.5191251883096	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGGACCAAAAAA	NA	False	NA	-2	True	NA	NA	NA	57984111	57964183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57979243_57980163_57980280_57980633_57980743_57981740
ES.11926.65	chr15	-	4828	22	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	15	1966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	77.7924443573601	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGGACCAAAAAA	NA	False	NA	-2	True	NA	NA	NA	57998463	57964183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989563_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.66	chr15	-	4406	21	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	20	904	intron_retention	FALSE	canonical	3	283	junction_18	29.1092339301466	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCTCTCTGCGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	57998458	57965245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.67	chr15	-	3254	21	ISM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	22	8954	22	-246	5prime_fragment	FALSE	canonical	3	283	junction_18	29.1092339301466	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACATATTTAGACAAAAGG	NA	False	NA	NA	False	AATAAA	-13	NA	57998456	57966395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.68	chr15	-	2794	16	NNC	ENSMUSG00000022360.9	novel	2826	2	NA	NA	2403	2450	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	88.5044631642947	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTGTAGGGTTTTTG	NA	False	NA	NA	False	AATAAA	-39	NA	57990004	57969200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57970014_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944
ES.11926.69	chr15	-	3640	13	ISM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	22	18153	22	-3944	5prime_fragment	FALSE	canonical	3	283	junction_10	28.6689679308869	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGACTCTACAGATTAT	NA	False	NA	NA	False	TATAAA	-19	NA	57998456	57975594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.70	chr15	-	4011	9	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	22	-860	intron_retention	FALSE	canonical	3	283	junction_6	28.4074704083275	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACATTTAAA	NA	False	NA	NA	False	NA	NA	NA	57998456	57980403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_57980743_57981740_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11926.71	chr15	-	3754	1	FSM	ENSMUSG00000022360.9	ENSMUST00000226582.2	2047	1	-1682	-25	-1682	25	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTTTAAACTTTCAAATA	NA	False	NA	NA	False	AAAAAG	-9	NA	57994089	57990335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57990300_57994100
ES.11926.72	chr15	-	176	1	FSM	ENSMUSG00000022360.9	ENSMUST00000227171.2	2141	1	1578	387	1578	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57995110	57994934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_57994900_57995100
ES.11926.73	chr15	-	174	1	Intergenic	novelGene_9977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTCTGACAC	NA	False	NA	NA	False	NA	NA	NA	58001989	58001815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58001800_58002000
ES.11926.9	chr15	-	5770	29	NNC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	94.0495622162125	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57998463	57957439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_57958968_57959972_57960102_57960428_57960528_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ES.11927.1	chr15	+	2181	2	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATGTGTGTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	58024813	58049747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58025072_58047824
ES.11927.2	chr15	+	1587	3	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGGCTATATGTTCC	NA	False	NA	NA	False	NA	NA	NA	58024814	58048277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58025072_58043176_58044054_58047824
ES.11927.3	chr15	+	149	1	Intergenic	novelGene_9978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	58024830	58024979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58024800_58025000
ES.11927.4	chr15	+	1832	3	Antisense	novelGene_ENSMUSG00000022358.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGCATCTGTAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	58024858	58069832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58025076_58062139_58062468_58068545
ES.11928.1	chr15	-	789	1	Intergenic	novelGene_9979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATATG	6719	False	NA	NA	False	NA	NA	NA	58027623	58026834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58026800_58027600
ES.11928.2	chr15	-	201	1	Intergenic	novelGene_9980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGGGGGGGGCTGGA	7115	False	NA	NA	False	NA	NA	NA	58027227	58027026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58027000_58027200
ES.11929.1	chr15	-	172	1	Intergenic	novelGene_9981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	58035339	58035167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58035200_58035300
ES.1193.1	chr1	+	1708	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAGAGAGCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	119071205	119072913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119071200_119072900
ES.11930.1	chr15	-	2769	9	FSM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	-1	4208	-1	-4208	multi-exon	FALSE	canonical	0	0	junction_1	0.7806247497998	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAGCAGAAATAGGAAT	NA	False	NA	NA	False	AATAAA	-25	NA	58078329	58043482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58044952_58046230_58046375_58047477_58047661_58054680_58054866_58055666_58055761_58068608_58068702_58069594_58069645_58071350_58071464_58077891
ES.11931.1	chr15	+	199	1	Intergenic	novelGene_9982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAAGCAAATACTAAAA	NA	False	NA	NA	False	NA	NA	NA	58244913	58245112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58244900_58245100
ES.11932.1	chr15	+	6112	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-5	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.105290530006	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58287311	58329655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303166_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.10	chr15	+	4370	23	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-5	-1343	intron_retention	FALSE	canonical	0	0	junction_8	77.7389145986436	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTTCCAATTACTG	NA	False	NA	NA	False	NA	NA	NA	58287311	58328246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301772_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.12	chr15	+	7019	21	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	8	intron_retention	FALSE	canonical	0	0	junction_8	81.2868224252861	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGTCTAATTTTCTGG	NA	False	NA	24	True	AATAAA	-24	NA	58287312	58329597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301772_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.14	chr15	+	5638	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.843387681119	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGGCTTTCCTGTG	NA	False	NA	2	True	ATTAAA	-15	NA	58287312	58329650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293751_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322377_58322511_58324831_58324902_58326598
ES.11932.15	chr15	+	5517	23	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	77.7663378704766	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAACCTGGCTTTCCTG	NA	False	NA	0	True	ATTAAA	-13	NA	58287312	58329648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296725_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.17	chr15	+	6668	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	296	junction_5	31.6557216114844	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287312	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.18	chr15	+	5744	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1119	intron_retention	FALSE	canonical	3	296	junction_5	31.2219034691325	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACAGTCCAGTTATTGCTG	NA	False	NA	8	True	AATAAA	-21	NA	58287312	58328470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.2	chr15	+	4448	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-5	1117	-5	-1117	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGTTATTGCTGAG	NA	False	NA	10	True	AATAAA	-23	NA	58287311	58328472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.20	chr15	+	5447	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	77.6010671307728	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287312	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.21	chr15	+	5793	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1352	intron_retention	FALSE	canonical	1	4	junction_11	76.9724160622955	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACTCATTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	58287312	58328237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831
ES.11932.22	chr15	+	5621	25	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	98.7247858105214	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287312	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324361_58324420_58324831_58324902_58326598
ES.11932.23	chr15	+	2786	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-4	2778	-4	-2778	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTTTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	58287312	58326811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.24	chr15	+	6428	21	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	-1119	intron_retention	FALSE	canonical	3	296	junction_5	30.2560324563549	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACAGTCCAGTTATTGCTG	NA	False	NA	8	True	AATAAA	-21	NA	58287312	58328470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.25	chr15	+	5495	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-4	66	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	73.4212486414261	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58287312	58329655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.26	chr15	+	5502	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-4	62	-4	-62	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCAATTTGATTATT	NA	False	NA	-46	True	TATAAA	-1	NA	58287312	58329527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.27	chr15	+	8057	20	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	307	junction_16	28.972333732091	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287313	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.28	chr15	+	5729	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.4532302019841	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287313	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296281_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.29	chr15	+	4790	23	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-3	-1124	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	100.197037286497	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACGACAGTCCAGTTAT	NA	False	NA	3	True	AATAAA	-16	NA	58287313	58328465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.3	chr15	+	5631	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	-5	-66	-5	66	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58287311	58329655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.31	chr15	+	9243	20	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-2	1	intron_retention	FALSE	canonical	3	296	junction_5	26.0612957416563	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGAGAGTGTCTAAT	NA	False	NA	17	True	AATAAA	-17	NA	58287314	58329590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58320342_58321779_58321885_58322386_58322511_58324831
ES.11932.32	chr15	+	2908	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	2	2650	2	-2650	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCCTGTCGTTACACAT	NA	False	NA	NA	False	NA	NA	NA	58287318	58326939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.33	chr15	+	4207	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	4	1349	4	-1349	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCATTTATTTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	58287320	58328240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.35	chr15	+	5335	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	102.274895233441	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGAGAGTGTCTAAT	NA	False	NA	17	True	AATAAA	-17	NA	58287322	58329590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.36	chr15	+	5495	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.4660794218413	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287322	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.37	chr15	+	4910	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	10	-1126	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	75.9257671492509	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTACGACAGTCCAGTT	NA	False	NA	1	True	AATAAA	-14	NA	58287326	58328463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.39	chr15	+	4625	25	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	13	-1124	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	99.080766367085	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACGACAGTCCAGTTAT	NA	False	NA	3	True	AATAAA	-16	NA	58287329	58328465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58287910_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.4	chr15	+	4554	13	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	103.162055632011	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTACTGTGGAGAGTG	NA	False	NA	11	True	AATAAA	-11	NA	58287311	58329584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.41	chr15	+	5608	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.0415516697303	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGAGAGTGTC	NA	False	NA	13	True	AATAAA	-13	NA	58287333	58329586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301772_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.42	chr15	+	4499	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	17	-1124	intron_retention	FALSE	canonical	3	296	junction_5	32.446300200396	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACGACAGTCCAGTTAT	NA	False	NA	3	True	AATAAA	-16	NA	58287333	58328465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.43	chr15	+	5442	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.6378565631968	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287333	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314780_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.44	chr15	+	9737	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	17	-1	intron_retention	FALSE	canonical	1	4	junction_11	78.5492898103173	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287333	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.48	chr15	+	5733	18	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_14	113.868284254965	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287337	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292049_58292133_58293594_58293747_58295169_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.51	chr15	+	4561	23	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	28	-1119	intron_retention	FALSE	canonical	0	0	junction_8	77.7389145986436	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACAGTCCAGTTATTGCTG	NA	False	NA	8	True	AATAAA	-21	NA	58287344	58328470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301772_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.52	chr15	+	5579	25	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.7375723252443	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287344	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58289106_58289155_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.53	chr15	+	5232	21	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	32	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	82.0475471906382	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287348	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.54	chr15	+	5583	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	34	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.6368699117316	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58287350	58329655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303162_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.55	chr15	+	5272	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	38	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	102.294293335355	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGAGAGTGTCTAAT	NA	False	NA	17	True	AATAAA	-17	NA	58287354	58329590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.56	chr15	+	5240	22	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.1520097764355	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTGTGGAGAGTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	58287354	58329587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292084_58296066_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.57	chr15	+	5485	23	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	78.4660794218413	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287354	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293769_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.58	chr15	+	5413	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	77.7389145986436	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58287355	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.6	chr15	+	6868	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-5	4	intron_retention	FALSE	canonical	3	296	junction_5	31.2219034691325	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGAGTGTCTAATTTT	NA	False	NA	20	True	AATAAA	-20	NA	58287311	58329593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.60	chr15	+	5471	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	39	-1349	intron_retention	FALSE	canonical	3	296	junction_5	31.2219034691325	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCATTTATTTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	58287355	58328240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.61	chr15	+	5506	24	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.0415516697303	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTACTGTGGAGAGTG	NA	False	NA	11	True	AATAAA	-11	NA	58287356	58329584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298957_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.63	chr15	+	8213	21	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	66	-3	intron_retention	FALSE	canonical	3	296	junction_4	31.7372021451167	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGAGAGTGTC	NA	False	NA	13	True	AATAAA	-13	NA	58287382	58329586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58287627_58292047_58292133_58293594_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.64	chr15	+	5164	22	ISM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	6276	3	6276	-3	3prime_fragment	FALSE	canonical	3	296	junction_3	32.5095485711401	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGAGAGTGTC	NA	False	NA	13	True	AATAAA	-13	NA	58293592	58329586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.65	chr15	+	8174	17	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	6512	-3	intron_retention	FALSE	canonical	3	296	junction_2	32.9421842020228	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGAGAGTGTC	NA	False	NA	13	True	AATAAA	-13	NA	58293828	58329586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.66	chr15	+	5659	11	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-1600	1	intron_retention	FALSE	canonical	1	4	junction_1	111.649272277073	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGAGAGTGTCTAAT	NA	False	NA	17	True	AATAAA	-17	NA	58302508	58329590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.67	chr15	+	6215	12	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-1556	-5	intron_retention	FALSE	canonical	3	305	junction_6	33.8643380037135	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTACTGTGGAGAGTG	NA	False	NA	11	True	AATAAA	-11	NA	58302552	58329584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58314816_58315009_58315124_58319434_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.68	chr15	+	4053	11	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-1054	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.145664205086	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTGTGGAGAGTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	58303054	58329587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58303066_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.69	chr15	+	6652	6	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-901	-1	intron_retention	FALSE	canonical	3	307	junction_3	37.4987999807994	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGAGAGTGTCTA	NA	False	NA	15	True	AATAAA	-15	NA	58313680	58329588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831
ES.11932.70	chr15	+	11821	3	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	364	0	intron_retention	FALSE	canonical	3	310	junction_1	36.5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	False	NA	16	True	AATAAA	-16	NA	58314945	58329589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58321885_58322386_58322511_58324831
ES.11932.71	chr15	+	6806	6	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	440	-1120	intron_retention	FALSE	canonical	3	307	junction_2	44.309818325062	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACAGTCCAGTTATTGCT	NA	False	NA	7	True	AATAAA	-20	NA	58315021	58328469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.72	chr15	+	8546	5	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	500	-4	intron_retention	FALSE	canonical	3	307	junction_1	46.6549836566256	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTACTGTGGAGAGTGT	NA	False	NA	12	True	AATAAA	-12	NA	58315081	58329585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.73	chr15	+	2941	4	ISM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	33457	1355	6192	-1355	3prime_fragment	FALSE	canonical	3	310	junction_1	43.9418808073675	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTACTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	58320773	58328234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.74	chr15	+	4351	4	ISM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	33468	-66	6203	66	3prime_fragment	FALSE	canonical	3	310	junction_1	43.9418808073675	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTTCCTGTGTTTTT	NA	False	NA	7	True	ATTAAA	-20	NA	58320784	58329655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_58321885_58322386_58322511_58324831_58324902_58326598
ES.11932.75	chr15	+	2005	1	ISM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	39516	752	12251	-752	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAGATTGATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	58326832	58328837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_58326800_58328800
ES.11932.8	chr15	+	5792	25	NNC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	-5	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	99.080766367085	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGTGTTGATCAAGTT	NA	False	NA	-2	True	TATAAA	-45	NA	58287311	58329571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58287627_58287867_58288113_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ES.11933.1	chr15	-	4360	1	Antisense	novelGene_ENSMUSG00000037119.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	58305082	58300722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_58300700_58305100
ES.11934.1	chr15	+	181	1	Intergenic	novelGene_9983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCCTGATCAAA	NA	False	NA	NA	False	NA	NA	NA	58332254	58332435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58332300_58332400
ES.11935.1	chr15	+	156	1	Intergenic	novelGene_9984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	58346913	58347069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58346900_58347100
ES.11936.1	chr15	+	164	1	Intergenic	novelGene_9985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	58631008	58631172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58631000_58631200
ES.11937.1	chr15	-	241	1	Intergenic	novelGene_9986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTCCCCTGTCTCAGA	NA	False	NA	NA	False	NA	NA	NA	58637508	58637267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58637300_58637500
ES.11938.1	chr15	+	4220	4	Antisense	novelGene_ENSMUSG00000093677.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTCAGATCATTTATAAGA	3649	False	NA	NA	False	NA	NA	NA	58652176	58660404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58652525_58652800_58652961_58653140_58653224_58656775
ES.11939.1	chr15	-	5171	7	FSM	ENSMUSG00000093677.2_ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	386	-1810	386	2	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACGTGTTTGACGGTTC	NA	False	NA	NA	False	AATAAA	-23	NA	58694993	58652307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.10	chr15	-	3242	6	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	346	-122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.1653092236274	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACGTTTGGAATGTGG	NA	False	NA	-35	True	NA	NA	NA	58695033	58654239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58694683
ES.11939.11	chr15	-	3656	8	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	54	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.0668658250328	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTAAGACGTTTGGA	NA	False	NA	-41	True	NA	NA	NA	58695325	58654245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58660788_58660884_58661234_58661278_58662007_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.12	chr15	-	3438	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-145	454	-37	-454	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTACTTTGCACAGT	NA	False	NA	70	True	ATTAAA	-32	NA	58695524	58654571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.13	chr15	-	3074	6	NIC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	81	-524	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.9268257128634	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATACTTCGTTTTCAAAA	NA	False	NA	0	True	AATAAA	-16	NA	58695298	58654641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58669049_58669095_58694691
ES.11939.14	chr15	-	3133	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-106	720	2	-720	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATTGTTGATTTTTT	NA	False	NA	NA	False	ATTAAA	-39	NA	58695485	58654837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.15	chr15	-	3174	8	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	27	-743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.8694380481605	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTTGGAGTTTAGAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	58695460	58654860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58662486_58662576_58666190_58666259_58669049_58669095_58694691
ES.11939.16	chr15	-	1692	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-132	2187	-24	-2187	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGGTGGTATTACTT	NA	False	NA	-2	True	NA	NA	NA	58695511	58656304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.17	chr15	-	5448	4	ISM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	28627	2192	28627	-2192	intron_retention	FALSE	canonical	3	158	junction_3	10.2306728354819	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTGTCTGGTGGTAT	NA	False	NA	-7	True	NA	NA	NA	58666752	58656309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003
ES.11939.18	chr15	-	1321	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	65	2361	65	-2361	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACTGATACTGTACTGT	NA	False	NA	NA	False	NA	NA	NA	58695314	58656478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.19	chr15	-	1301	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-57	2503	51	-2503	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTGTGGCTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	58695436	58656620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.2	chr15	-	4686	7	FSM	ENSMUSG00000093677.2_ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	81	-1020	81	-788	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAAAACCAATT	NA	False	NA	NA	False	AATAAA	-28	NA	58695298	58653097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.3	chr15	-	4226	7	FSM	ENSMUSG00000093677.2_ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	93	-572	93	572	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAGTTTTTTCATCCC	NA	False	NA	NA	False	AATAAA	-15	NA	58695286	58653545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.4	chr15	-	3886	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-135	-4	-27	4	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTATCTGCCCTCTT	NA	False	NA	91	True	AATAAA	-21	NA	58695514	58654113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.5	chr15	-	3881	8	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	49	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	75.2232052776595	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACGCGGCTTCTGTAT	NA	False	NA	81	True	AATAAA	-11	NA	58695438	58654123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58678926_58679008_58694691
ES.11939.6	chr15	-	3790	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	-145	102	-37	-102	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATTTTAAAATTTGG	NA	False	NA	-15	True	NA	NA	NA	58695524	58654219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.7	chr15	-	3664	8	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	29	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.0923307055984	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGTGGTTTTTGATT	NA	False	NA	-26	True	NA	NA	NA	58695350	58654230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58660553_58660613_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ES.11939.8	chr15	-	3655	8	NNC	ENSMUSG00000062373.9	novel	3747	7	NA	NA	58	-115	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	75.2232052776595	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGAATGTGGTTTTTGA	NA	False	NA	-28	True	NA	NA	NA	58695321	58654232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58678926_58679008_58694691
ES.1194.1	chr1	+	149	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGCCTTGGTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	119230726	119230875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119230700_119230900
ES.11940.1	chr15	-	166	1	Intergenic	novelGene_9987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATTATAT	NA	False	NA	NA	False	NA	NA	NA	58719679	58719513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58719500_58719700
ES.11941.1	chr15	-	121	1	Intergenic	novelGene_9988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTCTAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58728094	58727973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58728000_58728100
ES.11942.1	chr15	-	178	1	Intergenic	novelGene_9989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	58737506	58737328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58737300_58737500
ES.11943.1	chr15	+	2142	2	NNC	ENSMUSG00000037075.8	novel	1744	2	NA	NA	-17319	-2009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTGAACAAATAGCTT	NA	False	NA	81	True	AATAAA	-21	NA	58743758	58772230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58743828_58770157
ES.11943.10	chr15	+	2397	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-288	2239	-288	-2239	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGGTATTTGTTTAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	58760789	58772000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.11	chr15	+	2403	3	NNC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-285	-2088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGTCTCTTTGGTGA	NA	False	NA	2	True	AATATA	-12	NA	58760792	58772151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58761045_58761186_58761344_58770157
ES.11943.12	chr15	+	4125	3	NIC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-283	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	69.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGATTAATAGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	58760794	58778910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58761344_58770157_58772968_58778144
ES.11943.13	chr15	+	2665	3	NNC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-270	-2011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATTTGAACAAATAGC	NA	False	NA	79	True	AATAAA	-19	NA	58760807	58772228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58761344_58761738_58761797_58770157
ES.11943.14	chr15	+	4186	3	NNC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-269	8740	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAAACCTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	58760808	58787646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58761344_58770157_58773679_58787516
ES.11943.15	chr15	+	3805	3	NNC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-262	27381	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCTTCTTACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	58760815	58806287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58761344_58770157_58773419_58806271
ES.11943.16	chr15	+	3643	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-254	959	-254	-959	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGATTTAGTTTTTTT	NA	False	NA	NA	False	AGTAAA	-43	NA	58760823	58773280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.17	chr15	+	3676	3	NNC	ENSMUSG00000037075.8	novel	4348	2	NA	NA	-206	-826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGGGCCAAAAATTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	58760871	58773413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58761344_58770157_58772388_58772439
ES.11943.18	chr15	+	2941	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-131	1538	-131	-1538	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCTAAACAGTGCTGAC	NA	False	NA	NA	False	AATAAA	-23	NA	58760946	58772701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.19	chr15	+	178	1	Intergenic	novelGene_9991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTTTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	58764793	58764971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58764800_58765000
ES.11943.2	chr15	+	1730	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	-20	2744	-20	-2744	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGTGTGGCTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	58744502	58746232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58744500_58746200
ES.11943.20	chr15	+	2443	1	Antisense	novelGene_ENSMUSG00000050891.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCAGTGTAGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	58774744	58777187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58774700_58777200
ES.11943.21	chr15	+	4013	1	Intergenic	novelGene_9992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAATAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58783507	58787520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58783500_58787500
ES.11943.22	chr15	+	689	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	25	-10	25	10	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGTGTTCTTCCAAGG	2841	False	NA	23	True	AATAAA	-24	NA	58805629	58811347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ES.11943.23	chr15	+	5706	1	FSM	ENSMUSG00000022354.5	ENSMUST00000228595.2	458	1	-21	-5227	-21	4	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCTGAAGTGTTCTT	2847	False	NA	17	True	AATAAA	-18	NA	58805635	58811341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58805600_58811300
ES.11943.24	chr15	+	659	4	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1675.40980061596	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGAAGTGTTCT	2858	False	NA	16	True	AATAAA	-17	NA	58805646	58811340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_58805788_58808116_58808310_58809200_58809315_58811129
ES.11943.25	chr15	+	5312	3	NIC	ENSMUSG00000022354.5	novel	704	4	NA	NA	-9	3760	intron_retention	FALSE	canonical	3	3308	junction_2	203	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATATGTTGCTTTTA	2859	False	NA	NA	False	ATTAAA	-17	NA	58805647	58815097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58805788_58808116_58809315_58811123
ES.11943.28	chr15	+	4791	2	ISM	ENSMUSG00000115463.2	ENSMUST00000228787.2	398	3	44511	-2131	44511	2131	3prime_fragment	FALSE	canonical	3	3369	junction_1	0	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCTGAAGTGTTC	2869	False	NA	15	True	AATAAA	-16	NA	58805657	58811339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_58808310_58809200
ES.11943.29	chr15	+	3873	2	NIC	ENSMUSG00000022354.5	novel	704	4	NA	NA	1	2	intron_retention	FALSE	canonical	3	3308	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCTGAAGTGTTC	2869	False	NA	15	True	AATAAA	-16	NA	58805657	58811339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_58809315_58811123
ES.11943.3	chr15	+	4126	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	8	320	8	-320	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGGCCCCGGCTACC	NA	False	NA	NA	False	ATTAAA	-24	NA	58744530	58748656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58744500_58748700
ES.11943.30	chr15	+	4401	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	65	-3762	13	3762	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATATGTTGCTTTTAAT	2881	False	NA	NA	False	ATTAAA	-19	NA	58805669	58815099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ES.11943.4	chr15	+	2098	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	11	2345	11	-2345	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTTTTATTTTATGT	NA	False	NA	NA	False	ATTAAA	-13	NA	58744533	58746631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58744500_58746600
ES.11943.5	chr15	+	7208	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	4142	-6896	4142	6896	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTGAGCCCAGGTGT	NA	False	NA	NA	False	NA	NA	NA	58748664	58755872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58748700_58755900
ES.11943.6	chr15	+	4713	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-364	-1	-364	1	multi-exon	FALSE	canonical	3	140	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTATTGTGACACT	NA	False	NA	NA	False	AATAAA	-26	NA	58760713	58774240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.7	chr15	+	2661	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-318	2005	-318	-2005	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAACAAATAGCTTCTTA	NA	False	NA	85	True	AATAAA	-25	NA	58760759	58772234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.8	chr15	+	3838	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-299	809	-299	-809	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCACTGCTTATTCAT	NA	False	NA	NA	False	AATAAA	-32	NA	58760778	58773430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11943.9	chr15	+	3241	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	-298	1405	-298	-1405	multi-exon	FALSE	canonical	3	140	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTAATGGTGTTGTTAT	NA	False	NA	NA	False	CATAAA	-26	NA	58760779	58772834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_58761344_58770157
ES.11944.1	chr15	+	5406	1	Intergenic	novelGene_9993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGACATTTGTCCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	58882697	58888103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58882700_58888100
ES.11945.1	chr15	+	701	1	Intergenic	novelGene_9994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTCCATGGAAGCATCC	205	False	NA	NA	False	NA	NA	NA	58899780	58900481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_58899800_58900500
ES.11946.1	chr15	+	1931	1	Antisense	novelGene_ENSMUSG00000022353.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTCTGCACATCACAACA	NA	False	NA	NA	False	NA	NA	NA	58949780	58951711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_58949800_58951700
ES.11947.1	chr15	-	159	1	Intergenic	novelGene_9990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	58752959	58752800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58752800_58753000
ES.11948.1	chr15	-	1960	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	1	-1046	1	3	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTATCCTTGATCT	NA	False	NA	0	True	AATAAA	-19	NA	58805575	58771776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ES.11948.10	chr15	-	793	10	NNC	ENSMUSG00000050891.11	novel	1819	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.6881046264041	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTGTTTCCTTTTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	58805580	58772825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781425_58781499_58788000_58788042_58792988_58793032_58793122_58793267_58798284_58798366_58800532_58800599_58805527
ES.11948.11	chr15	-	3359	5	NNC	ENSMUSG00000050891.11	novel	922	10	NA	NA	3448	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	60.7633730136832	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTGTTTCCTTTTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	58784579	58772825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781425_58782303_58782389
ES.11948.12	chr15	-	974	13	NNC	ENSMUSG00000050891.11	novel	915	12	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.4811341518765	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTTGTGTTTCCTTTT	NA	False	NA	-6	True	ATTAAA	-11	NA	58805559	58772827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58794287_58794369_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ES.11948.13	chr15	-	744	2	FSM	ENSMUSG00000050891.11	ENSMUST00000226141.2	2089	2	-26	1371	-1	-1371	multi-exon	FALSE	canonical	3	108	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGTGTGGTGTGCTGTT	NA	False	NA	NA	False	AATAAA	-36	NA	58805588	58799915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_58800599_58805527
ES.11948.2	chr15	-	2014	12	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	30.1270038941207	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCATTTGAGTTATCCT	NA	False	NA	-6	True	AATAAA	-13	NA	58805559	58771782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795677_58795818_58798284_58798335_58800532_58800599_58805527
ES.11948.3	chr15	-	4937	5	NNC	ENSMUSG00000050891.11	novel	915	12	NA	NA	1876	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	51.4660081995874	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58786151	58772822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58782285_58782372
ES.11948.4	chr15	-	1350	11	NNC	ENSMUSG00000050891.11	novel	922	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	47.0371130066461	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	False	NA	-2	True	ATTAAA	-15	NA	58805544	58772823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781425_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800392_58800599_58805131
ES.11948.6	chr15	-	921	12	NNC	ENSMUSG00000050891.11	novel	915	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.4110617233832	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	False	NA	-2	True	ATTAAA	-15	NA	58805570	58772823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58794155_58794233_58798284_58798335_58800532_58800599_58805527
ES.11948.7	chr15	-	839	11	NIC	ENSMUSG00000050891.11	novel	915	12	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	26.3417918904542	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	False	NA	-2	True	ATTAAA	-15	NA	58805565	58772823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58798284_58798335_58800532_58800599_58805527
ES.11948.8	chr15	-	2657	12	NNC	ENSMUSG00000050891.11	novel	915	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	37.9468963440854	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	False	NA	-2	True	ATTAAA	-15	NA	58805581	58772823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58794155_58795818_58798284_58798335_58800392_58800599_58805527
ES.11948.9	chr15	-	4530	6	NIC	ENSMUSG00000050891.11	novel	498	6	NA	NA	-4152	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	55.3208821332415	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGTTTCCTTTTTAT	NA	False	NA	-3	True	ATTAAA	-14	NA	58792179	58772824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58772920_58776128_58776271_58776582_58776710_58777589_58777661_58788000_58788042_58788125
ES.11949.1	chr15	-	6090	1	Genic_Genomic	ENSMUSG00000022353.11	novel	NA	NA	NA	NA	11848	5591	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACAAAAAGCAGTGTCCA	9992	False	NA	NA	False	NA	NA	NA	58813581	58807491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_58807500_58813600
ES.11949.15	chr15	-	3084	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-107	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGATCTTTTAATTTG	2622	False	NA	0	True	ATTAAA	-22	NA	58953961	58815092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.16	chr15	-	7231	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-350	-2	intron_retention	FALSE	canonical	3	49	junction_1	9.16818169298338	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGATCTTTTAATTTG	2379	False	NA	0	True	ATTAAA	-22	NA	58954204	58815092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.17	chr15	-	3105	12	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	6	junction_2	21.2357876634221	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGATCTTTTAATTTG	2682	False	NA	0	True	ATTAAA	-22	NA	58953901	58815092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.18	chr15	-	3296	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-366	-4	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTTGATCTTTTAATT	2363	False	NA	-2	True	ATTAAA	-20	NA	58954220	58815094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.19	chr15	-	2779	15	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-56	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.1900409881219	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTTGATCTTTTAATT	2673	False	NA	-2	True	ATTAAA	-20	NA	58953910	58815094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815419_58815625_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.2	chr15	-	5222	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-277	3	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTCTCCTTCAGATTG	2452	False	NA	NA	False	AATAAA	-22	NA	58954131	58813079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.20	chr15	-	1879	8	NNC	ENSMUSG00000022353.11	novel	2062	9	NA	NA	-117	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.211475078946	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTTGATCTTTTAATT	NA	False	NA	-2	True	ATTAAA	-20	NA	58828438	58815094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58816835_58816919_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281
ES.11949.21	chr15	-	2872	15	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-52	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	19.7247642959456	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACCTTGATCTTTTAA	2677	False	NA	-4	True	ATTAAA	-18	NA	58953906	58815096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815518_58815625_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.23	chr15	-	2829	13	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.584154918169	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACCTTGATCTTTTAA	2674	False	NA	-4	True	ATTAAA	-18	NA	58953909	58815096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58817165_58817370_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.24	chr15	-	3018	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-275	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	27.4797905539487	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACCTTGATCTTTTA	2454	False	NA	-5	True	ATTAAA	-17	NA	58954129	58815097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840676_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.25	chr15	-	3049	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-111	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	21.0305497709556	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACCTTGATCTTTTA	2618	False	NA	-5	True	ATTAAA	-17	NA	58953965	58815097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840676_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.26	chr15	-	3221	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-355	5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCTATAATCAAGC	2374	False	NA	0	True	AATAAA	-20	NA	58954209	58815203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.27	chr15	-	2876	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCTATAATCAAGC	2674	False	NA	0	True	AATAAA	-20	NA	58953909	58815203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.28	chr15	-	1188	5	NNC	ENSMUSG00000022353.11	novel	2062	9	NA	NA	6070	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27.9407856009812	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCCAGTCTATAATCAA	4278	False	NA	-2	True	AATAAA	-18	NA	58819359	58815205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815518_58815625_58815980_58817210_58817374_58817694_58817869_58819174
ES.11949.29	chr15	-	2868	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.0520033970845	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCCAGTCTATAATCAA	2674	False	NA	-2	True	AATAAA	-18	NA	58953909	58815205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815974_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.3	chr15	-	5085	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.5619283971199	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTCTCCTTCAGATTG	2694	False	NA	NA	False	AATAAA	-22	NA	58953889	58813079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58816040_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.30	chr15	-	7218	12	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-132	0	intron_retention	FALSE	canonical	3	49	junction_1	9.46240931701037	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCATTCCAGTCTATAAT	2597	False	NA	-5	True	AATAAA	-15	NA	58953986	58815208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817869_58819174_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.31	chr15	-	2930	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	20.0520033970845	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCATTCCAGTCTATAA	2674	False	NA	-6	True	AATAAA	-14	NA	58953909	58815209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58816040_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.4	chr15	-	4912	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-166	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCAGGTCTCCTTCAG	2563	False	NA	NA	False	AATAAA	-18	NA	58954020	58813083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.5	chr15	-	4690	13	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.3185913902057	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCAGGTCTCCTTCA	2732	False	NA	NA	False	AATAAA	-17	NA	58953851	58813084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815518_58815625_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823527_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58953304
ES.11949.6	chr15	-	5027	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	20.0520033970845	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCAGGTCTCCTTCA	2702	False	NA	NA	False	AATAAA	-17	NA	58953881	58813084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58816040_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.7	chr15	-	5281	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-347	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.0520033970845	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCAGGTCTCCTTCA	2382	False	NA	NA	False	AATAAA	-17	NA	58954201	58813084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815974_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.8	chr15	-	4984	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCAGGTCTCCTTCA	2730	False	NA	NA	False	AATAAA	-17	NA	58953853	58813084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ES.11949.9	chr15	-	4974	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-47	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	20.6790063053123	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTTCTCAGGTCTC	2682	False	NA	NA	False	AATAAA	-12	NA	58953901	58813089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926933_58930209_58930272_58953304
ES.1195.1	chr1	+	1474	4	Antisense	novelGene_ENSMUSG00000099860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAACTTTGTGTGTTCA	NA	False	NA	NA	False	AAGAAA	-17	NA	119233328	119247474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_119233438_119233851_119234328_119237444_119237901_119247041
ES.11950.1	chr15	-	173	1	Intergenic	novelGene_9995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	167	False	NA	NA	False	NA	NA	NA	58956416	58956243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_58956200_58956400
ES.11951.1	chr15	-	175	1	Intergenic	novelGene_9996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	59180697	59180522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59180500_59180700
ES.11952.1	chr15	+	145	1	Intergenic	novelGene_9997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59181050	59181195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59181000_59181200
ES.11953.1	chr15	-	159	1	Intergenic	novelGene_9998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59184411	59184252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59184300_59184400
ES.11954.1	chr15	+	2828	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-69	-1	-65	1	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	False	NA	14	True	AATAAA	-19	NA	59186860	59203042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.10	chr15	+	2675	11	NNC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	242.479359946367	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186907	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201644_59202645
ES.11954.12	chr15	+	4527	9	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-8	2209	-4	25	5prime_fragment	FALSE	canonical	3	657	junction_1	55.4998592340557	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCCATGGTAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	59186921	59200832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418
ES.11954.13	chr15	+	4656	8	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	1	-8	intron_retention	FALSE	canonical	3	657	junction_1	54.6879832340166	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTATGTTCTTTTGG	NA	False	NA	5	True	AATAAA	-10	NA	59186926	59203033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59187979_59189644_59189898_59193162_59194782_59195462_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.14	chr15	+	7366	9	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	657	junction_1	55.5673858931658	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186927	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59187979_59189644_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.16	chr15	+	4079	10	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	657	junction_1	52.3959285950095	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186949	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59187979_59189644_59189898_59193162_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.17	chr15	+	1500	9	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	2802	0	2802	0	3prime_fragment	FALSE	canonical	1	3	junction_5	267.858842256514	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59189757	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.2	chr15	+	2714	12	NNC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.894354686649	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186888	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59187197_59187281_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.3	chr15	+	2766	11	NNC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	242.479359946367	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186888	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201644_59202573
ES.11954.4	chr15	+	2780	11	NNC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.448530620418	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATGTTCTTTTGGT	NA	False	NA	6	True	AATAAA	-11	NA	59186889	59203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59187973_59189649_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.5	chr15	+	2749	11	NNC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	239.12342001569	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186889	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198509_59201630_59201677_59202573
ES.11954.6	chr15	+	2877	10	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-36	0	intron_retention	FALSE	canonical	3	657	junction_1	54.3016267405192	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186889	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11954.8	chr15	+	3680	10	ISM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	-25	0	-21	0	intron_retention	FALSE	canonical	3	657	junction_1	56.5661417728108	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186904	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588
ES.11954.9	chr15	+	2679	9	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	-19	0	intron_retention	FALSE	canonical	1	1	junction_2	260.011898766191	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186906	59203041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59187979_59189644_59189898_59194684_59194782_59195462_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ES.11955.1	chr15	+	1828	1	Antisense	novelGene_ENSMUSG00000022350.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGGACTCTGGGGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	59203111	59204939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_59203100_59204900
ES.11956.1	chr15	+	1199	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	-66	-11	-28	-1	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCATGGTCCTGTCT	NA	False	NA	15	True	AATAAA	-16	NA	59246067	59473532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ES.11956.10	chr15	+	5108	1	Intergenic	novelGene_10003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACTAACAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	59355394	59360502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59355400_59360500
ES.11956.11	chr15	+	2286	1	Intergenic	novelGene_10004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTGAAATTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	59405115	59407401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59405100_59407400
ES.11956.12	chr15	+	4690	1	Intergenic	novelGene_10005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCGGGAGGTGACTCA	NA	False	NA	NA	False	NA	NA	NA	59458014	59462704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59458000_59462700
ES.11956.2	chr15	+	940	6	NIC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	346.521225901098	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246078	59473533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59246205_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ES.11956.3	chr15	+	1103	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	-45	-4	-5	4	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGTCCTGTCTGCTGT	NA	False	NA	20	True	AATAAA	-21	NA	59246090	59473537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ES.11956.5	chr15	+	3696	2	ISM	ENSMUSG00000059586.11	ENSMUST00000168722.3	2679	5	19	157191	-19	-157191	5prime_fragment	FALSE	canonical	3	929	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAACTATTTTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	59246114	59254322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_59246205_59250716
ES.11956.6	chr15	+	910	6	NIC	ENSMUSG00000059586.11	novel	1054	7	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	363.00666660545	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCAGCATGGTCCTGT	NA	False	NA	13	True	AATAAA	-14	NA	59246122	59473530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_59246205_59250716_59250888_59287873_59287981_59463545_59463647_59463986_59464094_59473188
ES.11956.7	chr15	+	2611	5	FSM	ENSMUSG00000059586.11	ENSMUST00000168722.3	2679	5	69	-1	29	1	multi-exon	FALSE	canonical	0	0	junction_4	404.592001280302	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATTTTCTTATTTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	59246164	59411514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59409375
ES.11956.8	chr15	+	4004	1	Intergenic	novelGene_10002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGATAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	59335635	59339639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59335600_59339600
ES.11956.9	chr15	+	672	4	NNC	ENSMUSG00000059586.11	novel	1122	8	NA	NA	104942	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.477117542165	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCATGGTCCTGTCT	NA	False	NA	15	True	AATAAA	-16	NA	59351077	59473532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59351198_59463545_59463647_59463986_59464094_59473188
ES.11957.1	chr15	-	197	1	Intergenic	novelGene_9999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	59193644	59193447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59193400_59193600
ES.11958.1	chr15	-	6897	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-25	-2839	-25	2839	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAATTTTTTTAATTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	59246041	59201006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.11	chr15	-	5503	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-19	-1451	-19	1451	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCTTTGAGAAGCTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	59246035	59202394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.12	chr15	-	4234	7	NIC	ENSMUSG00000022350.8	novel	2618	19	NA	NA	10930	1420	intron_retention	FALSE	canonical	3	437	junction_3	47.5219247646108	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	59213448	59202425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908
ES.11958.13	chr15	-	4818	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	1354	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1580698835967	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAGGACTTAGCAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	59246035	59202491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.17	chr15	-	4270	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-26	799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1580698835967	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAAGAGTTCACTCTTC	NA	False	NA	NA	False	TATAAA	-25	NA	59246042	59203046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.18	chr15	-	4863	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-32	-798	-32	798	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAAGAGTTCACTCTT	NA	False	NA	NA	False	TATAAA	-24	NA	59246048	59203047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.2	chr15	-	6036	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-27	2564	intron_retention	FALSE	non_canonical	0	0	junction_1	95.1580698835967	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTATGATTTTGTTCTA	NA	False	NA	NA	False	TTTAAA	-1	NA	59246043	59201281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.20	chr15	-	4608	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-18	793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.97226834386	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGAACATAAGAGTTCA	NA	False	NA	NA	False	TATAAA	-19	NA	59246034	59203052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206584_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.21	chr15	-	4837	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	7	792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	96.8352996334603	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAGAACATAAGAGTTC	NA	False	NA	NA	False	TATAAA	-18	NA	59246009	59203053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235215_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.24	chr15	-	4322	31	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-2	787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.562178087262	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAGAACATAAG	NA	False	NA	NA	False	TATAAA	-13	NA	59246018	59203058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59243843_59243932_59245889
ES.11958.28	chr15	-	4352	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-18	784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.782588574749	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAACCAAAAGAACAT	NA	False	NA	NA	False	TATAAA	-10	NA	59246034	59203061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59217957_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.3	chr15	-	2792	10	NNC	ENSMUSG00000022350.8	novel	2618	19	NA	NA	10484	2154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.492512577755	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTAGAACTTACATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	59213894	59201691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203232_59203819_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787
ES.11958.30	chr15	-	4201	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-32	-136	-32	136	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTTCTAGCTGCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	59246048	59203709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.31	chr15	-	3590	8	ISM	ENSMUSG00000022350.8	ENSMUST00000227725.2	2618	19	9029	-133	9029	133	intron_retention	FALSE	canonical	3	437	junction_4	44.7268352996092	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTGCTCTTCTAGCTG	NA	False	NA	NA	False	AGTAAA	-13	NA	59215349	59203712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908
ES.11958.35	chr15	-	4088	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-52	-3	-52	3	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCCTGCTTGTGATGA	NA	False	NA	0	True	AGTAAA	-19	NA	59246068	59203842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.37	chr15	-	5869	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	87	0	intron_retention	FALSE	canonical	3	371	junction_17	45.4038425281796	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59245929	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.38	chr15	-	3899	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	98.349897467977	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246035	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.39	chr15	-	3914	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	98.3212170815387	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246008	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.40	chr15	-	3982	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.1500408587685	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246041	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204133_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.41	chr15	-	4162	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_28	123.816998942434	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246041	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59243076_59243181_59245889
ES.11958.42	chr15	-	4073	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	126.603727538057	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246021	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207093_59209015_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224342_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.44	chr15	-	4049	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	96.5820735891268	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246036	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233078_59235038_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.47	chr15	-	4227	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	125.285851514742	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246004	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59235839_59236046_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.49	chr15	-	4007	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	96.7219874544711	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246032	59203845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213915_59215879_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.5	chr15	-	5151	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	1687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1580698835967	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGAGTTCTCTGTTAT	NA	False	NA	NA	False	ACTAAA	-27	NA	59246035	59202158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.50	chr15	-	4140	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	124.411547116358	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246036	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59243843_59243932_59245889
ES.11958.52	chr15	-	5309	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	371	junction_17	44.6080322723372	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246035	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.53	chr15	-	4293	30	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.851706133942	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246018	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206584_59206844_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.54	chr15	-	6724	27	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	7	-1	intron_retention	FALSE	canonical	3	371	junction_16	45.7823510606331	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246009	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.55	chr15	-	4155	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	96.3994863543772	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246034	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59217957_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.56	chr15	-	4005	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	126.36309846257	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246009	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210761_59210893_59211662_59211767_59212740_59212821_59212908_59212991_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.57	chr15	-	1317	10	NNC	ENSMUSG00000022350.8	novel	2618	19	NA	NA	8964	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	158.492512577755	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59215414	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215378
ES.11958.59	chr15	-	3936	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-50	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_26	98.1457721585224	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246066	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241728_59242035_59245889
ES.11958.6	chr15	-	5027	31	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	11	1685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.24176781162	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTCAGAGTTCTCTGTT	NA	False	NA	NA	False	ACTAAA	-25	NA	59246005	59202160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231162_59231253_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.61	chr15	-	3811	28	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	128.690556216295	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246035	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241728_59241941_59245889
ES.11958.63	chr15	-	4024	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.6769858496	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246034	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205488_59205551_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.64	chr15	-	3991	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.128744274816	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246041	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59207002_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.66	chr15	-	3957	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	96.0042715354959	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGCCCTGCTTGTG	NA	False	NA	-4	True	AGTAAA	-15	NA	59246035	59203846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59241941_59245889
ES.11958.67	chr15	-	4152	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.9848786985508	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246016	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205345_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.68	chr15	-	3953	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	97.2699494844237	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246035	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.69	chr15	-	6012	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	371	junction_18	44.2426282095858	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246040	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.7	chr15	-	5733	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-19	-1681	-19	1681	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAATTCAGAGTTCTC	NA	False	NA	NA	False	ACTAAA	-21	NA	59246035	59202164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.70	chr15	-	6719	27	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_7	99.7963607025199	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246020	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212806_59212908_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.72	chr15	-	4081	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.1955053789003	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246060	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218662_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.74	chr15	-	4159	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	126.598332355138	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246032	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205345_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220366_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.75	chr15	-	4207	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.788019684998	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246030	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206584_59206844_59206936_59207091_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.76	chr15	-	4068	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	96.7219874544711	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246035	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213969_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.77	chr15	-	3870	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	98.16778280193	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246035	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.78	chr15	-	3520	25	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	102.376543198245	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGTTGCCCTGCTTGT	NA	False	NA	-5	True	AGTAAA	-14	NA	59246035	59203847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217317_59222025_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.80	chr15	-	3946	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	97.4658464327401	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGAGTTGCCCTGCTTG	NA	False	NA	-6	True	AGTAAA	-13	NA	59246034	59203848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.81	chr15	-	3986	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	149.964634436365	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGAGTTGCCCTGCTTG	NA	False	NA	-6	True	AGTAAA	-13	NA	59246032	59203848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221234_59221999_59222061_59222155_59222297_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.82	chr15	-	4045	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	127.486113689584	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTACTGAGTTGCCCTGC	NA	False	NA	-9	True	AGTAAA	-10	NA	59246036	59203851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235038_59235196_59238011_59238205_59239243_59239345_59240230_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.83	chr15	-	2018	17	ISM	ENSMUSG00000022350.8	ENSMUST00000227725.2	2618	19	2199	124	2199	-124	3prime_fragment	FALSE	canonical	3	437	junction_4	34.5176019408939	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTTTTGTACTTGCC	NA	False	NA	NA	False	NA	NA	NA	59222179	59203969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135
ES.11958.84	chr15	-	4813	28	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-29	507	-29	-507	5prime_fragment	FALSE	canonical	3	371	junction_17	44.6080322723372	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGTCTCGTTTCCCTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	59246045	59204352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.85	chr15	-	5059	29	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-19	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.044515546701	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTTGTCTCGTTTCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	59246035	59204355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59205555_59206584_59206844_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.86	chr15	-	4728	26	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-25	3921	-25	-3921	5prime_fragment	FALSE	canonical	3	371	junction_15	38.3572678901926	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTTCCCAGGTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	59246041	59207766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.87	chr15	-	4050	25	ISM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	-25	6223	-25	-6223	5prime_fragment	FALSE	canonical	3	371	junction_14	38.9641706856725	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAGCTAAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	59246041	59210068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ES.11958.89	chr15	-	5501	4	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-5230	-15125	intron_retention	FALSE	canonical	3	371	junction_2	17.1529071070248	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59229608	59218970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_59222303_59223320_59223434_59224349_59224480_59227682
ES.11958.9	chr15	-	5239	31	NNC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	-9	1681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.084450545119	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAATTCAGAGTTCTC	NA	False	NA	NA	False	ACTAAA	-21	NA	59246025	59202164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_59203228_59203815_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59243076_59243181_59245889
ES.11959.1	chr15	-	3768	1	Intergenic	novelGene_10000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACGGGCAGTGTGTTTC	9809	False	NA	NA	False	AATAAA	-25	NA	59265415	59261647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59261600_59265400
ES.1196.1	chr1	-	4375	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	-118	-2	-118	2	multi-exon	FALSE	canonical	3	45	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCTTGTGTGATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	119350096	119343192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119345828_119348356
ES.11960.1	chr15	-	173	1	Intergenic	novelGene_10001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTCATTTT	NA	False	NA	NA	False	NA	NA	NA	59291171	59290998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59291000_59291200
ES.11961.1	chr15	-	167	1	Intergenic	novelGene_10006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACAGTATGCTATGAAG	NA	False	NA	NA	False	NA	NA	NA	59504523	59504356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59504400_59504500
ES.11962.1	chr15	-	897	2	Intergenic	novelGene_10007	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTCATTCAACAAACGCT	5510	False	NA	NA	False	AATAAA	-21	NA	59520071	59519024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59519653_59519802
ES.11962.2	chr15	-	409	1	Intergenic	novelGene_10008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCCTCCACCTCCAC	5561	False	NA	NA	False	AATAAA	-19	NA	59520020	59519611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59519600_59520000
ES.11963.1	chr15	+	3874	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	-91	547	-91	-547	multi-exon	FALSE	canonical	3	22	junction_1	4.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGTTTCCTTTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	59520107	59528401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59521372_59523327_59523621_59526084
ES.11963.2	chr15	+	2734	2	FSM	ENSMUSG00000032501.10	ENSMUST00000118228.2	3081	2	-176	523	127	-523	multi-exon	FALSE	canonical	3	22	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59520325	59525015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_59521372_59523327
ES.11963.3	chr15	+	3511	4	NNC	ENSMUSG00000032501.10	novel	4330	3	NA	NA	167	-549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.3708994574027	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGAGTTTCCTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	59520668	59528399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_59521372_59523327_59523621_59524943_59525144_59526084
ES.11964.1	chr15	+	1475	2	Intergenic	novelGene_10009	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGAGATGCTTGCGT	NA	False	NA	NA	False	NA	NA	NA	59537491	59539725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59538196_59538954
ES.11965.1	chr15	-	234	1	Intergenic	novelGene_10010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACATTTACACAATGGA	NA	False	NA	NA	False	NA	NA	NA	59542329	59542095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59542100_59542300
ES.11966.1	chr15	+	1197	1	Intergenic	novelGene_10011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGGTATGTTGTC	6505	False	NA	NA	False	NA	NA	NA	59702323	59703520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_59702300_59703500
ES.11967.1	chr15	-	166	1	Intergenic	novelGene_10012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	59740669	59740503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59740500_59740700
ES.11968.1	chr15	-	177	1	Intergenic	novelGene_10013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGTGTACTAGAGAG	NA	False	NA	NA	False	NA	NA	NA	59954945	59954768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_59954800_59954900
ES.11969.1	chr15	+	5725	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	669	-3320	-13	177	multi-exon	FALSE	canonical	1	1	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATCTGTTTCTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	60694788	60703819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_60696633_60699180_60699212_60699969
ES.11969.2	chr15	+	2378	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	696	0	14	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGGTGAGTTCCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	60694815	60700499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_60696633_60699180_60699212_60699969
ES.11969.3	chr15	+	4859	3	NNC	ENSMUSG00000097493.4	novel	3074	3	NA	NA	103	233	intron_retention	FALSE	canonical	1	1	junction_1	1.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTAGCTGTATGTTG	NA	False	NA	NA	False	NA	NA	NA	60695353	60703875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_60696276_60699180_60699212_60699969
ES.1197.1	chr1	-	576	2	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACATGTGGCTCAGT	NA	False	NA	NA	False	AATAAA	-22	NA	119371864	119367871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_119368350_119371766
ES.11970.1	chr15	-	5443	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	124	-2	124	2	multi-exon	FALSE	canonical	3	40	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTCCTTTTTTTTTCTT	NA	False	NA	NA	False	AATACA	-16	NA	60696805	60690840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_60695841_60696362
ES.11970.10	chr15	-	2303	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	221	3041	221	2997	multi-exon	FALSE	canonical	3	40	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCAGGTCACAGATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	60696708	60693883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_60695841_60696362
ES.11970.2	chr15	-	5301	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	36	228	36	-228	multi-exon	FALSE	canonical	3	40	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGTGTATGACTTTCT	NA	False	NA	93	True	AATAAA	-15	NA	60696893	60691070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_60695841_60696362
ES.11970.3	chr15	-	5410	2	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	202	-228	intron_retention	FALSE	canonical	1	1	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGTGTATGACTTTCT	NA	False	NA	93	True	AATAAA	-15	NA	60696727	60691070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_60696116_60696362
ES.11970.4	chr15	-	4755	2	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	594	-322	intron_retention	FALSE	canonical	2	5	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTTCCTCTTTACTCTG	NA	False	NA	-1	True	AATAAA	-21	NA	60696335	60691164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_60695841_60696256
ES.11970.5	chr15	-	2544	3	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	193	-325	intron_retention	FALSE	canonical	3	5	junction_1	17.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCTTCCTCTTTACT	NA	False	NA	-4	True	AATAAA	-18	NA	60696736	60691167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_60692121_60694623_60695841_60696362
ES.11970.6	chr15	-	5645	1	NIC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	117	-325	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCTTCCTCTTTACT	NA	False	NA	-4	True	AATAAA	-18	NA	60696812	60691167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_60691200_60696800
ES.11970.7	chr15	-	5337	3	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	84	-326	intron_retention	FALSE	canonical	0	0	junction_1	0.5	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCGCTTCCTCTTTAC	NA	False	NA	-5	True	AATAAA	-17	NA	60696845	60691168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_60695841_60695933_60696116_60696362
ES.11970.8	chr15	-	5109	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	124	332	124	-332	multi-exon	FALSE	canonical	3	40	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTAAGCCGCTTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	60696805	60691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_60695841_60696362
ES.11970.9	chr15	-	4809	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	218	538	218	-538	multi-exon	FALSE	canonical	3	40	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATGTTTTATTCTTGG	NA	False	NA	NA	False	GATAAA	-22	NA	60696711	60691380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_60695841_60696362
ES.11971.1	chr15	+	180	1	Intergenic	novelGene_10014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGAATATAAGTA	NA	False	NA	NA	False	NA	NA	NA	61600799	61600979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_61600800_61601000
ES.11972.1	chr15	+	176	1	Intergenic	novelGene_10015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGATGGTT	NA	False	NA	NA	False	NA	NA	NA	61818904	61819080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_61818900_61819100
ES.11973.1	chr15	-	3409	2	Intergenic	novelGene_10016	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGCTCATTGCCAACT	NA	False	NA	NA	False	AATAAA	-17	NA	61850870	61831143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_61834506_61850823
ES.11973.2	chr15	-	4183	1	Intergenic	novelGene_10017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGGGCTCATTGCCAA	NA	False	NA	NA	False	AATAAA	-15	NA	61835328	61831145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_61831100_61835300
ES.11974.1	chr15	+	2351	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	-5	-8	-5	8	multi-exon	FALSE	canonical	3	22	junction_2	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTGGGCCAACTTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	61857234	61862207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_61857801_61859355_61860128_61861194
ES.11974.3	chr15	+	3716	2	FSM	ENSMUSG00000022346.18	ENSMUST00000160009.2	1765	2	-1871	-80	-13	-17	multi-exon	FALSE	canonical	3	22	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAATTGGA	NA	False	NA	NA	False	TTTAAA	-44	NA	61857399	61862182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_61860128_61861194
ES.11974.4	chr15	+	2077	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	160	101	-13	-4	multi-exon	FALSE	canonical	3	22	junction_2	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATTTTAAGACATGTA	NA	False	NA	NA	False	AATAAA	-18	NA	61857399	61862098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_61857801_61859355_61860128_61861194
ES.11975.1	chr15	+	205	1	Intergenic	novelGene_10018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGTTAGGAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	61892620	61892825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_61892600_61892800
ES.11976.1	chr15	+	1423	8	NNC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-5702	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.0804111026659	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61904132	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61904278_61904396_61904536_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11976.10	chr15	+	2795	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	9.3392838174146	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTGATTTTTTTTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	61909868	62122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114147_62114282_62114411_62116567_62116707_62121006
ES.11976.11	chr15	+	2929	9	NNC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	11.2242761459258	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGCGTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	61909868	62122822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61910051_61978996_61979315_62002039_62002113_62021087_62021202_62047315_62047398_62085660_62085749_62114022_62114151_62114282_62114411_62121006
ES.11976.12	chr15	+	5485	6	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	13.7753402861781	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATTGAAGTCATGATT	NA	False	NA	23	True	AATAAA	-31	NA	61909873	62121373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_62021087_62021202_62031845_62031978_62114022_62114151_62114282_62114411_62116567
ES.11976.13	chr15	+	5881	8	NNC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_4	11.9454542630668	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCATGATTGTC	NA	False	NA	26	True	AATAAA	-34	NA	61909873	62121376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62079666_62079792_62114022_62114151_62114282_62114411_62116567
ES.11976.14	chr15	+	1339	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	7.7817450199525	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61909875	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ES.11976.15	chr15	+	2865	8	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-11	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.2120377146637	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTGATTTTTTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	61909875	62122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62047676_62047776_62114022_62114151_62114282_62114411_62121006
ES.11976.16	chr15	+	2675	6	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	11.0706820024784	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAAGCGTGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	61909877	62122820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62114022_62114151_62114282_62114411_62121006
ES.11976.18	chr15	+	1618	10	NNC	ENSMUSG00000097039.9	novel	1052	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.4583255914754	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61911075	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61911297_61915777_61915948_61978996_61979315_62031845_62031978_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006_62121211_62121279
ES.11976.19	chr15	+	1311	7	NIC	ENSMUSG00000097039.9	novel	1052	7	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.7581874455363	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAAGTCATGATTGTCA	NA	False	NA	27	True	AATAAA	-35	NA	61911126	62121377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61911297_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11976.2	chr15	+	1432	8	NNC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-5687	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.7532624380336	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGTCATGATTGTCAA	NA	False	NA	28	True	AATAAA	-36	NA	61904147	62121378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61904278_61904396_61904536_61978996_61979315_62047315_62047398_62114022_62114147_62114282_62114411_62116567_62116707_62121006
ES.11976.20	chr15	+	4424	1	Intergenic	novelGene_10021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAACCAAATAAATATTA	NA	False	NA	NA	False	NA	NA	NA	62077282	62081706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_62077300_62081700
ES.11976.21	chr15	+	3522	4	ISM	ENSMUSG00000097039.9	ENSMUST00000182380.8	873	5	21193	0	16813	0	3prime_fragment	FALSE	canonical	3	17	junction_3	5.43650214343336	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	62111264	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_62114151_62114282_62114411_62116567_62116707_62121006
ES.11976.22	chr15	+	3309	1	Intergenic	novelGene_10022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCAAGATGGCCTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	62117364	62120673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_62117400_62120700
ES.11976.23	chr15	+	4817	1	NIC	ENSMUSG00000097039.9	novel	2798	7	NA	NA	23554	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGCGTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	62118005	62122822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_62118000_62122800
ES.11976.3	chr15	+	5894	9	NNC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-5657	2	intron_retention	FALSE	non_canonical	0	0	junction_1	12.3686852575365	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTCATGATTGTCAAT	NA	False	NA	29	True	AATAAA	-37	NA	61904177	62121379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61904278_61904396_61904536_61978996_61979315_62002039_62002113_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62116567
ES.11976.4	chr15	+	2962	9	NNC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-5655	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1542786548331	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCGTGATTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	61904179	62122826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61904278_61904396_61904536_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114147_62114282_62114411_62116567_62116707_62121006
ES.11976.5	chr15	+	1522	6	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-281	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.29457654133109	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61909553	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11976.6	chr15	+	2665	6	NIC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	21	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.29457654133109	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAAGCGTGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	61909855	62122820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11976.7	chr15	+	5781	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_2	12.6183288204985	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGAAGTCATGATTGT	NA	False	NA	25	True	AATAAA	-33	NA	61909865	62121375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62031845_62031978_62047315_62047398_62114022_62114151_62114282_62114411_62116567
ES.11976.8	chr15	+	2772	7	NIC	ENSMUSG00000097039.9	novel	1563	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	6.0736223860962	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGCGTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	61909866	62122824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_61910051_61978996_61979315_62021087_62021202_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11976.9	chr15	+	2725	7	NNC	ENSMUSG00000097039.9	novel	1342	7	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.2565175405668	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAAGCGTGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	61909868	62122820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_61910051_61978996_61979315_62002039_62002113_62047315_62047398_62114022_62114151_62114282_62114411_62121006
ES.11977.1	chr15	-	3829	1	Intergenic	novelGene_10019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAATACTCAACTGGAGA	NA	False	NA	NA	False	NA	NA	NA	61929169	61925340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_61925300_61929200
ES.11978.1	chr15	-	3348	1	Intergenic	novelGene_10020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGGCTATCTCTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	61935952	61932604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_61932600_61936000
ES.11979.1	chr15	-	3041	2	Antisense	novelGene_ENSMUSG00000097039.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGGAAGGGATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62024732	62021090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_62022571_62023171
ES.1198.1	chr1	+	2961	2	Antisense	novelGene_ENSMUSG00000004451.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTGCAGCCGCA	NA	False	NA	NA	False	NA	NA	NA	119397753	119404783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_119399553_119403621
ES.11980.1	chr15	-	7382	1	Antisense	novelGene_ENSMUSG00000097039.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGATGTGACCAGAGT	NA	False	NA	NA	False	NA	NA	NA	62131655	62124273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_62124300_62131700
ES.11981.1	chr15	+	3420	6	Intergenic	novelGene_10023	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAGTACTTCACACACA	NA	False	NA	NA	False	NA	NA	NA	62826556	62846702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_62826597_62827088_62827222_62829648_62829733_62834376_62834479_62838407_62838596_62843829
ES.11982.1	chr15	+	179	1	Intergenic	novelGene_10024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTGGAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	62930957	62931136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_62931000_62931100
ES.11983.1	chr15	-	155	1	Intergenic	novelGene_10025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	63375017	63374862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_63374900_63375000
ES.11984.1	chr15	-	176	1	Intergenic	novelGene_10026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCACCTTAAA	5543	False	NA	NA	False	NA	NA	NA	63712726	63712550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_63712600_63712700
ES.11985.1	chr15	+	2571	1	Antisense	novelGene_ENSMUSG00000022378.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAACAAGGAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	63892295	63894866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_63892300_63894900
ES.11986.1	chr15	+	3529	1	Intergenic	novelGene_10029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTTTTTCTCCACACT	NA	False	NA	NA	False	NA	NA	NA	63927344	63930873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_63927300_63930900
ES.11987.1	chr15	-	3183	21	Fusion	ENSMUSG00000055748.13_ENSMUSG00000022378.15	novel	2085	12	NA	NA	12	3	multi-exon	FALSE	canonical	0	0	junction_1	562.603881518782	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATATATATTTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	63932315	63763109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_63763932_63764474_63764549_63764966_63765097_63765587_63765728_63766521_63766549_63766778_63766809_63767005_63767114_63769565_63769672_63772128_63772292_63773764_63773943_63774571_63774784_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63932043
ES.11987.11	chr15	-	3936	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	490.844680117856	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932359	63800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63823865_63823941_63828448_63828532_63842778_63842818_63932043
ES.11987.12	chr15	-	3705	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-57	2	combination_of_known_splicesites	FALSE	canonical	3	70	junction_12	311.438095775067	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932384	63800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932275
ES.11987.13	chr15	-	3935	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-94	2	combination_of_known_splicesites	FALSE	canonical	3	50	junction_10	331.600900217103	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932421	63800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043
ES.11987.15	chr15	-	3970	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	415.891741717003	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932342	63800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63823865_63823941_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.17	chr15	-	3649	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-116	1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	398.425212555631	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTCATTTGTATATATA	8623	False	NA	-3	True	NA	NA	NA	63869934	63800944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63869746
ES.11987.18	chr15	-	2940	13	NNC	ENSMUSG00000022378.15	novel	3797	12	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	330.523700612629	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTCATTTGTATATAT	NA	False	NA	-4	True	NA	NA	NA	63932398	63800945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63802520_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.19	chr15	-	3693	11	NIC	ENSMUSG00000022378.15	novel	3797	12	NA	NA	-117	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTCATTTGTATATAT	8622	False	NA	-4	True	NA	NA	NA	63869935	63800945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
ES.11987.2	chr15	-	5258	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-165	-3197	-30	1350	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATATGTGTGT	NA	False	NA	NA	False	ACTAAA	-20	NA	63932357	63799595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.20	chr15	-	2277	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-197	-184	-62	182	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTGATTGTGTCGACA	NA	False	NA	NA	False	TTTAAA	-18	NA	63932389	63802608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.21	chr15	-	2060	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-113	-177	-113	177	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACCAGTGATTGTGT	8626	False	NA	NA	False	TTTAAA	-13	NA	63869931	63802613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ES.11987.23	chr15	-	2043	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-274	1	-274	-1	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTGGTTTACTGA	8465	False	NA	-5	True	AATAAA	-21	NA	63870092	63802791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ES.11987.24	chr15	-	2261	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932474	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
ES.11987.25	chr15	-	2005	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_13	319.774162172148	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932554	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043_63932230_63932482
ES.11987.26	chr15	-	1942	11	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	444.687407062534	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932372	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63932043
ES.11987.27	chr15	-	1860	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_12	311.438095775067	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932388	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932275
ES.11987.28	chr15	-	1967	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	420.10941035243	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932488	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63894418_63894470_63932043_63932230_63932415
ES.11987.29	chr15	-	1822	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-24654	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	474.835666017436	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63894472	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829444_63829517_63842778_63842814_63894414
ES.11987.3	chr15	-	5254	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-8	1285	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGCAGTTTTCTGAATA	NA	False	NA	NA	False	AATAAA	-13	NA	63932335	63799660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
ES.11987.31	chr15	-	1912	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	480.281398996695	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932233	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803524_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811607_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932059
ES.11987.32	chr15	-	1834	12	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-193	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	333.709578293204	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8546	False	NA	-6	True	AATAAA	-20	NA	63870011	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869873
ES.11987.34	chr15	-	1822	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-137	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	398.425212555631	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8602	False	NA	-6	True	AATAAA	-20	NA	63869955	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63869746
ES.11987.36	chr15	-	2017	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	337.207589887425	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932396	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63894418_63894470_63932043
ES.11987.37	chr15	-	2121	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	411.910656440069	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932373	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63894418_63894470_63932043
ES.11987.39	chr15	-	2074	15	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	422.865184527781	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932473	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043_63932230_63932415
ES.11987.4	chr15	-	3842	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-210	-1862	-210	17	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTATTTATGGCTAT	8529	False	NA	13	True	NA	NA	NA	63870028	63800928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ES.11987.40	chr15	-	1867	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-138	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8601	False	NA	-6	True	AATAAA	-20	NA	63869956	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
ES.11987.41	chr15	-	2215	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	409.537233425888	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932298	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63803803_63804017_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.42	chr15	-	2052	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	-102	1847	-72	0	multi-exon	FALSE	canonical	3	62	junction_11	317.474070002523	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932399	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
ES.11987.43	chr15	-	2104	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	417.27962330273	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932334	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63839301_63839368_63842778_63842818_63894418_63894470_63932043
ES.11987.44	chr15	-	1942	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_12	447.037719015099	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932206	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63932043
ES.11987.45	chr15	-	2892	8	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	52101	2	15675	0	3prime_fragment	FALSE	canonical	3	1084	junction_4	44.4062874753896	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63817717	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171
ES.11987.46	chr15	-	2007	13	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-156	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	411.541310198624	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8583	False	NA	-6	True	AATAAA	-20	NA	63869974	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63869746
ES.11987.47	chr15	-	1963	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_13	429.880938518766	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932408	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932275
ES.11987.48	chr15	-	1866	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-274	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_12	323.628934893035	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932601	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932482
ES.11987.5	chr15	-	4021	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-275	-1850	-140	3	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTGTATATATATA	NA	False	NA	-1	True	NA	NA	NA	63932467	63800942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.51	chr15	-	1832	10	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	379.825040944374	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932372	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63894418_63894470_63932043
ES.11987.55	chr15	-	1848	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	27255	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	329.244199729556	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	7368	False	NA	-6	True	AATAAA	-20	NA	63904924	63802792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63904823
ES.11987.56	chr15	-	1776	12	NNC	ENSMUSG00000022378.15	novel	3797	12	NA	NA	-274	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	334.830856522123	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGCTTGGTTTACT	8465	False	NA	-7	True	AATAAA	-19	NA	63870092	63802793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63870011
ES.11987.58	chr15	-	3399	11	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	25297	3	-11129	-1	3prime_fragment	FALSE	canonical	3	970	junction_10	77.7583436037574	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGCTTGGTTTACT	654	False	NA	-7	True	AATAAA	-19	NA	63844521	63802793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778
ES.11987.6	chr15	-	3611	10	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-115	3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	367.530228873493	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTGTATATATATA	8624	False	NA	-1	True	NA	NA	NA	63869933	63800942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63869746
ES.11987.60	chr15	-	1877	11	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	360.446889291613	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGCTTGGTTTACT	NA	False	NA	-7	True	AATAAA	-19	NA	63932296	63802793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63894418_63894470_63932043
ES.11987.61	chr15	-	1714	10	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-113	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	465.587084586045	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGCTTGGTTTACT	8626	False	NA	-7	True	AATAAA	-19	NA	63869931	63802793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
ES.11987.62	chr15	-	1755	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-41	-2	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	425.778179162859	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGGCTTGGTTTAC	NA	False	NA	-8	True	AATAAA	-18	NA	63932368	63802794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63894418_63894470_63932275
ES.11987.63	chr15	-	1951	14	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-108	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	319.306700886106	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGGCTTGGTTTAC	NA	False	NA	-8	True	AATAAA	-18	NA	63932435	63802794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043_63932230_63932415
ES.11987.64	chr15	-	1928	12	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-119	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	424.614574867706	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGGCTTGGTTTA	8620	False	NA	-9	True	AATAAA	-17	NA	63869937	63802795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63869746
ES.11987.67	chr15	-	2060	13	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	334.416116371339	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAAGTGTGGCTTGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	63932368	63802796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813850_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ES.11987.68	chr15	-	1431	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	-117	456	-117	-454	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGGCCATCTAAGGCA	8622	False	NA	NA	False	AGTAAA	-31	NA	63869935	63803246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ES.11987.69	chr15	-	1152	1	Intergenic	novelGene_10027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTCTATCAAGTGTGGG	3838	False	NA	NA	False	NA	NA	NA	63810511	63809359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_63809400_63810500
ES.11987.7	chr15	-	4000	14	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-36	3	combination_of_known_junctions	FALSE	canonical	3	121	junction_10	363.626149130341	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTGTATATATATA	NA	False	NA	-1	True	NA	NA	NA	63932363	63800942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043
ES.11987.70	chr15	-	3360	1	Intergenic	novelGene_10028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	63880336	63876976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_63877000_63880300
ES.11987.71	chr15	-	3811	2	FSM	ENSMUSG00000022378.15	ENSMUST00000226129.2	2614	2	-58	-1139	-8	1139	multi-exon	FALSE	canonical	3	743	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTAGCATCCGGTGAT	NA	False	NA	NA	False	NA	NA	NA	63932335	63890950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63894470_63932043
ES.11987.72	chr15	-	3601	2	NIC	ENSMUSG00000022378.15	novel	2614	2	NA	NA	-31	1138	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTAGCATCCGGTGA	NA	False	NA	NA	False	NA	NA	NA	63932358	63890951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63894470_63932275
ES.11987.8	chr15	-	3837	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	-37	-3	-7	3	multi-exon	FALSE	canonical	3	62	junction_11	317.474070002523	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTGTATATATATA	NA	False	NA	-1	True	NA	NA	NA	63932334	63800942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
ES.11987.9	chr15	-	3826	12	NIC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-29	2	combination_of_known_splicesites	FALSE	canonical	3	57	junction_9	337.207589887425	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATTTGTATATATAT	NA	False	NA	-2	True	NA	NA	NA	63932356	63800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63842778_63842818_63894418_63894470_63932043
ES.11988.1	chr15	-	1780	1	Intergenic	novelGene_10030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGTG	1026	False	NA	NA	False	NA	NA	NA	63942258	63940478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_63940500_63942300
ES.11989.1	chr15	+	3435	1	Antisense	novelGene_ENSMUSG00000022377.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAGCAAACAAAAGTACAA	NA	False	NA	NA	False	NA	NA	NA	63963783	63967218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_63963800_63967200
ES.11989.2	chr15	+	3275	2	Antisense	novelGene_ENSMUSG00000022377.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAGCAAACAAAAGTACAA	NA	False	NA	NA	False	NA	NA	NA	63963783	63967218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_63964178_63964337
ES.1199.1	chr1	+	2209	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-66	681	-66	-681	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTCCGAGTCTTGGG	NA	False	NA	111	True	NA	NA	NA	119453823	119456032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_119453800_119456000
ES.1199.2	chr1	+	1485	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	-35	1374	-35	380	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCACTTTGCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	119453854	119455339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_119453900_119455300
ES.1199.3	chr1	+	1700	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	-24	-995	-11	-759	multi-exon	FALSE	canonical	2	5	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTGTGAAGATAT	NA	False	NA	33	True	NA	NA	NA	119453878	119455954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_119454278_119454653
ES.11990.1	chr15	+	1921	1	Intergenic	novelGene_10031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGTAACTTGACTTGAT	2124	False	NA	NA	False	NA	NA	NA	64026214	64028135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_64026200_64028100
ES.11991.1	chr15	+	5191	1	Intergenic	novelGene_10033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACACGACTTATAAATT	NA	False	NA	NA	False	AAAACA	-34	NA	64125019	64130210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_64125000_64130200
ES.11992.11	chr15	-	6359	31	NNC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	35.3173706080544	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATCTGACATCAGGCC	NA	False	NA	-9	True	AATAAA	-19	NA	64254781	63958706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64045222_64045315_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.13	chr15	-	5963	29	FSM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	-49	-1677	-49	-7	multi-exon	FALSE	canonical	3	31	junction_27	27.267640798094	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCCAAGCATCTGACAT	NA	False	NA	-15	True	AATAAA	-13	NA	64254654	63958712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.14	chr15	-	4638	27	ISM	ENSMUSG00000022377.17	ENSMUST00000177035.8	3228	28	37217	-1275	4	364	3prime_fragment	FALSE	canonical	3	36	junction_5	23.2403508003955	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCTGTCTGTCTGTC	NA	False	NA	NA	False	GATAAA	-16	NA	64184518	63960020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.15	chr15	-	4885	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	18	-368	18	363	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTCTGTCTGTCTGT	NA	False	NA	NA	False	GATAAA	-15	NA	64254750	63960021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.16	chr15	-	4837	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	11	1316	11	363	multi-exon	FALSE	canonical	3	82	junction_19	14.5305128081956	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTCTGTCTGTCTGT	NA	False	NA	NA	False	GATAAA	-15	NA	64184511	63960021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.17	chr15	-	4675	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70084	-367	1	362	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCTGTCTGTCTG	NA	False	NA	NA	False	GATAAA	-14	NA	64184521	63960022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.20	chr15	-	4781	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	-79	-167	-79	162	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGGTCTTTCCGTTTT	NA	False	NA	0	True	NA	NA	NA	64254847	63960222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.21	chr15	-	4730	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-1	153	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTAAAGTCGGTCT	NA	False	NA	-9	True	NA	NA	NA	64254769	63960231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.23	chr15	-	4413	27	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	70135	-156	18	151	3prime_fragment	FALSE	canonical	3	36	junction_5	20.3393183224631	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGTAAAGTCGGT	NA	False	NA	-11	True	NA	NA	NA	64184470	63960233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.24	chr15	-	4655	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	23.6466758642573	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTTCTGGTCACTCA	NA	False	NA	2	True	ATTAAA	-25	NA	64254847	63960384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.25	chr15	-	4334	29	NNC	ENSMUSG00000022377.17	novel	4415	28	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	26.6221673783028	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTTCTGGTCACTCA	NA	False	NA	2	True	ATTAAA	-25	NA	64184699	63960384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64184616
ES.11992.31	chr15	-	4515	29	FSM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	-276	-2	-113	0	multi-exon	FALSE	canonical	3	31	junction_27	27.267640798094	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	64254881	63960387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.34	chr15	-	4670	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	-133	-2	-133	0	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	64254901	63960387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.35	chr15	-	3758	20	NIC	ENSMUSG00000022377.17	novel	4314	30	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.7356935745429	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64184511	63960389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64063332_64063479_64080332_64080406_64184197
ES.11992.39	chr15	-	4202	29	NIC	ENSMUSG00000022377.17	novel	4535	30	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	29.1131457438395	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATGCTTGTTTCTGGT	NA	False	NA	-4	True	ATTAAA	-19	NA	64254607	63960390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.4	chr15	-	5955	29	NIC	ENSMUSG00000022377.17	novel	4535	30	NA	NA	-68	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	29.1131457438395	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACATCAGGCCATT	NA	False	NA	-6	True	AATAAA	-22	NA	64254673	63958703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.40	chr15	-	4590	30	NNC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	30.1860658769444	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATGCTTGTTTCTGGT	NA	False	NA	-4	True	ATTAAA	-19	NA	64254782	63960390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995595_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.41	chr15	-	4650	30	NNC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	30.6131941742533	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAATGCTTGTTTCTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	64254676	63960391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045315_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.43	chr15	-	6772	1	NIC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	-950	2053	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGAGTGCTCCATCTGGC	1574	False	NA	NA	False	NA	NA	NA	63996605	63989833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63989800_63996600
ES.11992.44	chr15	-	2783	22	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-27	31172	7	330	5prime_fragment	FALSE	canonical	3	46	junction_13	19.9364068342397	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAGACTGAAACGGTAAA	NA	False	NA	NA	False	NA	NA	NA	64184515	63991556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.45	chr15	-	1520	14	NNC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	11	-15661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	43.0994446620547	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTGGCTTGTCACTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64184511	64007600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64109843_64109929_64184197
ES.11992.46	chr15	-	3329	13	ISM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	1	58918	1	11480	5prime_fragment	FALSE	canonical	3	31	junction_11	32.5374783903117	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAATATCACAT	NA	False	NA	NA	False	NA	NA	NA	64254604	64019307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.47	chr15	-	3295	13	ISM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	162	58918	-1	11480	5prime_fragment	FALSE	canonical	3	31	junction_11	35.6817530398942	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAATATCACAT	NA	False	NA	NA	False	NA	NA	NA	64254606	64019307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.48	chr15	-	3636	1	NIC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	-27305	11463	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	31	False	NA	NA	False	NA	NA	NA	64022960	64019324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_64019300_64023000
ES.11992.49	chr15	-	1095	7	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	-47	77727	-13	6955	5prime_fragment	FALSE	canonical	3	103	junction_2	8.18026079453868	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGTCTACCTCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	64184535	64038111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ES.11992.5	chr15	-	6265	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	-8	2	combination_of_known_junctions	TRUE	canonical	3	31	junction_28	23.6466758642573	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGACATCAGGCCATT	NA	False	NA	-6	True	AATAAA	-22	NA	64254776	63958703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.50	chr15	-	391	1	Intergenic	novelGene_10032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAGAAAAAAG	2785	False	NA	NA	False	NA	NA	NA	64057898	64057507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_64057500_64057900
ES.11992.51	chr15	-	5718	1	NIC	ENSMUSG00000022377.17	novel	6164	28	NA	NA	11768	37	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAACATGTCACTGGAG	NA	False	NA	NA	False	NA	NA	NA	64068572	64062854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_64062900_64068600
ES.11992.52	chr15	-	980	3	FSM	ENSMUSG00000022377.17	ENSMUST00000175710.8	985	3	5	0	5	0	multi-exon	FALSE	canonical	3	120	junction_2	2.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAGCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64184517	64062891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_64063479_64080332_64080406_64184197
ES.11992.8	chr15	-	6057	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	163	-1685	0	1	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGACATCAGGCCAT	NA	False	NA	-7	True	AATAAA	-21	NA	64254605	63958704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ES.11992.9	chr15	-	5961	29	NNC	ENSMUSG00000022377.17	novel	4314	30	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	26.6221673783028	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	-8	True	AATAAA	-20	NA	64184647	63958705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64184616
ES.11993.1	chr15	-	726	4	Intergenic	novelGene_10034	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTGTAGAAGTTGTAG	NA	False	NA	NA	False	NA	NA	NA	64463805	64460528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_64460911_64461968_64462111_64462977_64463055_64463680
ES.11994.1	chr15	+	907	1	Intergenic	novelGene_10035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATCTGGAACCATA	NA	False	NA	NA	False	NA	NA	NA	65145218	65146125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_65145200_65146100
ES.11995.1	chr15	-	6844	1	Intergenic	novelGene_10036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGTTCAAAGGGATACAAAT	NA	False	NA	NA	False	NA	NA	NA	65242837	65235993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_65236000_65242800
ES.11996.1	chr15	+	175	1	Intergenic	novelGene_10037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	65584413	65584588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_65584400_65584600
ES.11997.1	chr15	+	2315	5	NIC	ENSMUSG00000015002.19	novel	1411	5	NA	NA	-26	799	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	224.100842256338	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCAATTTTTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	65658856	65698115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462
ES.11997.10	chr15	+	5377	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.737950024979	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCTATGTATAAGTGCAT	NA	False	NA	6	True	AATAAA	-13	NA	65658886	65745654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682002_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.11	chr15	+	2123	8	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-1257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	191.041399509453	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65658886	65744408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690414_65733497_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.12	chr15	+	4058	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-1226	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658886	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.13	chr15	+	4294	23	NNC	ENSMUSG00000015002.19	novel	2848	23	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	120.098246627398	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAATGCAAAAATGATGT	NA	False	NA	NA	False	AATAAA	-45	NA	65658886	65741097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65739356
ES.11997.14	chr15	+	5284	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCATTTTTATTATAG	NA	False	NA	17	True	AATAAA	-24	NA	65658886	65745665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.15	chr15	+	5353	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAGTGCATTTTTATT	NA	False	NA	13	True	AATAAA	-20	NA	65658886	65745661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.16	chr15	+	3625	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-2	1592	-2	966	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTGTGTTCTTGCTA	NA	False	NA	NA	False	NA	NA	NA	65658886	65744073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.18	chr15	+	3906	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	-1257	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	120.664217172222	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65658886	65744408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717840_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.19	chr15	+	3437	17	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	-3	11355	-2	160	intron_retention	FALSE	canonical	3	451	junction_16	49.9210313895857	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGTCTTTTCTTCAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	65658886	65729745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370
ES.11997.2	chr15	+	3093	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-24	2146	-18	412	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTCCTGCTTTCTAA	NA	False	NA	NA	False	AGTAAA	-25	NA	65658864	65743519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.20	chr15	+	3138	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-2	402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.319391646858	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTTGCAAATTCTCTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	65658886	65743509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65666610_65666688_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.21	chr15	+	3797	1	NIC	ENSMUSG00000015002.19	novel	1425	2	NA	NA	-2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGTCAGACTATTTT	NA	False	NA	NA	False	NA	NA	NA	65658886	65662683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65658900_65662700
ES.11997.22	chr15	+	5591	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-1	-375	-1	375	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTGTTTAGATGAATTA	NA	False	NA	6	True	NA	NA	NA	65658887	65746040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.23	chr15	+	4458	22	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	-2	26	-1	-26	intron_retention	FALSE	canonical	3	451	junction_16	47.8478787527074	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGCATTTAATTAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	65658887	65741074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118
ES.11997.25	chr15	+	4389	16	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	176.682691097157	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAAAAATAGCATC	NA	False	NA	-12	True	NA	NA	NA	65658887	65745636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721653_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.26	chr15	+	3764	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1	966	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTGTGTTCTTGCTA	NA	False	NA	NA	False	NA	NA	NA	65658887	65744073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.27	chr15	+	5712	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1	359	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	152.369092222308	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGAATTAATG	NA	False	NA	-10	True	NA	NA	NA	65658887	65746024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682036_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.29	chr15	+	1402	8	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	-2	26182	-1	-11037	5prime_fragment	FALSE	canonical	3	491	junction_4	27.0388986613051	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTAATTGTGCCATTT	NA	False	NA	NA	False	AATAAA	-24	NA	65658887	65714918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490
ES.11997.3	chr15	+	4013	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-24	1226	-18	-1226	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658864	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.30	chr15	+	2191	2	NNC	ENSMUSG00000015002.19	novel	1425	2	NA	NA	-1	252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCGGGATGTTTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	65658887	65663452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659615_65661988
ES.11997.33	chr15	+	3837	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1	-1228	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	123.210805103818	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGGAAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	65658887	65744437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.35	chr15	+	900	2	FSM	ENSMUSG00000015002.19	ENSMUST00000174135.2	1425	2	6	519	0	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATTTGTCAGACTATT	NA	False	NA	NA	False	NA	NA	NA	65658888	65662681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65661988
ES.11997.37	chr15	+	3374	8	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	191.041399509453	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAGTGCATTTTTATT	NA	False	NA	13	True	AATAAA	-20	NA	65658888	65745661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690414_65733497_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.38	chr15	+	3478	19	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-1259	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	131.541208395593	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65658888	65744406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.39	chr15	+	5429	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.573774611094	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAGTGCATTTTTATT	NA	False	NA	13	True	AATAAA	-20	NA	65658888	65745661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659314_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.4	chr15	+	5231	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	-15	-1	-9	1	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATTTTTATTATAGC	NA	False	NA	18	True	AATAAA	-25	NA	65658873	65745666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.40	chr15	+	5187	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	121.365032337903	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATGTATAAGTGCATTT	NA	False	NA	8	True	AATAAA	-15	NA	65658888	65745656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729434_65733512_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.41	chr15	+	3867	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-1226	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	124.220727399441	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658888	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.42	chr15	+	5655	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	373	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCTGTTTAGATGAAT	NA	False	NA	4	True	NA	NA	NA	65658888	65746038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.43	chr15	+	3540	25	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-1257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	154.724480708631	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65658889	65744408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001_65743671_65743985_65744047_65744148
ES.11997.44	chr15	+	3120	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	399	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGGGTTGCAAATTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	65658891	65743506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.45	chr15	+	2958	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	183.849117305154	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTGAAAATGTA	NA	False	NA	NA	False	TTTAAA	-22	NA	65658895	65743413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.46	chr15	+	4314	16	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	136.249020383838	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAAAAATAGCATC	NA	False	NA	-12	True	NA	NA	NA	65658895	65745636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721653_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.47	chr15	+	4121	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-1226	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658896	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.48	chr15	+	3934	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	-1227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.175305014902	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGGAAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	65658896	65744438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690327_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.49	chr15	+	2852	23	FSM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	7	-11	0	11	multi-exon	FALSE	canonical	3	59	junction_22	108.882983667015	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTGCAAGATTTAAATA	NA	False	NA	NA	False	ATTAAA	-32	NA	65658896	65741111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65740802
ES.11997.5	chr15	+	5099	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-6	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	124.220727399441	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658876	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.50	chr15	+	2171	6	NNC	ENSMUSG00000015002.19	novel	1411	5	NA	NA	1	797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.667532727404	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGCAATTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	65658897	65698113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65697789_65697822
ES.11997.51	chr15	+	14268	20	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-6	intron_retention	FALSE	canonical	3	451	junction_16	49.7507916945874	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658897	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.52	chr15	+	3421	17	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	88	intron_retention	FALSE	canonical	3	34	junction_2	132.019396657272	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGGTTTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	65658897	65729673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370
ES.11997.54	chr15	+	5305	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	155.319391646858	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	12	True	AATAAA	-19	NA	65658897	65745660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65666610_65666715_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.55	chr15	+	5267	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	185.05623447308	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAGTGCATTTTTATT	NA	False	NA	13	True	AATAAA	-20	NA	65658897	65745661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65681957_65682174_65687183_65687261_65690281_65690410_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.58	chr15	+	1677	4	FSM	ENSMUSG00000015002.19	ENSMUST00000174591.3	3225	4	1	1547	1	1133	multi-exon	FALSE	canonical	3	549	junction_2	12.0277457017791	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTTTTGCTTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	65658897	65692842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568
ES.11997.59	chr15	+	8038	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-1228	intron_retention	FALSE	canonical	3	451	junction_16	49.6914287904674	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGGAAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	65658897	65744437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.6	chr15	+	5082	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-6	-7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	123.824999032859	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTATAAGTGCATTTTT	NA	False	NA	10	True	AATAAA	-17	NA	65658876	65745658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.60	chr15	+	5194	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	121.381680647016	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGCATTTTTATTAT	NA	False	NA	15	True	AATAAA	-22	NA	65658897	65745663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724819_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.62	chr15	+	5052	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	123.210805103818	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGCATTTTTATTATA	NA	False	NA	16	True	AATAAA	-23	NA	65658899	65745664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.63	chr15	+	1770	8	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	4	962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	191.041399509453	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTCTGTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	65658900	65744069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690414_65733497_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.65	chr15	+	3283	17	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	11	11495	4	20	intron_retention	FALSE	canonical	3	451	junction_16	49.9210313895857	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTTTCACATTTGT	NA	False	NA	NA	False	AATGAA	-13	NA	65658900	65729605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370
ES.11997.66	chr15	+	5414	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	153.188616949658	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	12	True	AATAAA	-19	NA	65658900	65745660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65681957_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.67	chr15	+	5275	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	186.240194931007	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658900	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690297_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65727816_65727911_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.68	chr15	+	3900	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	7	1191	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTGTAGCTCAAAAAA	NA	False	NA	NA	False	TATAAA	-15	NA	65658903	65744298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.71	chr15	+	7805	22	ISM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	17	1226	9	-1226	intron_retention	FALSE	canonical	3	451	junction_16	47.8478787527074	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658905	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118
ES.11997.72	chr15	+	5179	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	121.451696006313	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65658905	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728443_65729329_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.74	chr15	+	4026	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	14	-1226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.239309264801	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658910	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65708385_65708445_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.75	chr15	+	2939	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	24	2252	16	306	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTGAAAATGTA	NA	False	NA	NA	False	TTTAAA	-22	NA	65658912	65743413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.76	chr15	+	5120	23	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	16	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	121.381680647016	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCGCCTATGTATAAGTG	NA	False	NA	3	True	AATAAA	-10	NA	65658912	65745651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723001_65724842_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.77	chr15	+	5409	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	17	370	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	123.210805103818	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAATGCTGTTTAGATG	NA	False	NA	1	True	NA	NA	NA	65658913	65746035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.78	chr15	+	2171	17	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	25	12593	18	-174	5prime_fragment	FALSE	canonical	3	451	junction_16	49.9210313895857	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGATTAATTATTGTT	NA	False	NA	NA	False	TATAAA	-21	NA	65658914	65728507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370
ES.11997.79	chr15	+	2530	18	ISM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	28	11357	21	158	5prime_fragment	FALSE	canonical	3	451	junction_16	48.6970722353065	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGCTGTCTTTTCTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	65658917	65729743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312
ES.11997.8	chr15	+	1984	15	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	139.24783367677	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	65658883	65725954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65725741
ES.11997.80	chr15	+	7229	22	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	25	-56	intron_retention	FALSE	canonical	3	451	junction_15	49.6421205837787	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATTGTGCAATCATA	NA	False	NA	21	True	AATAAA	-21	NA	65658921	65745609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.81	chr15	+	5221	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.239309264801	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTATAAGTGCATTTTT	NA	False	NA	10	True	AATAAA	-17	NA	65658934	65745658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65708385_65708445_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.83	chr15	+	4323	18	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	19587	-59	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	134.812236463705	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCATTGTGCAATC	NA	False	NA	18	True	AATAAA	-18	NA	65701669	65745606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65701726_65709283_65709422_65714490_65714570_65717757_65717840_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.84	chr15	+	2937	15	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	35673	-1330	-5214	-1228	3prime_fragment	FALSE	canonical	3	451	junction_8	57.0535015649025	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGGAAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	65717755	65744437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.85	chr15	+	3837	16	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-5100	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	143.564155229175	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAAAAATAGCATC	NA	False	NA	-12	True	NA	NA	NA	65717869	65745636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001_65744189_65744373
ES.11997.86	chr15	+	3635	11	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	-1323	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	174.428237392918	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65721646	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727404_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.87	chr15	+	3541	9	NNC	ENSMUSG00000015002.19	novel	387	3	NA	NA	2010	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.457703841212	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTATAAGTGCATTTTT	NA	False	NA	10	True	AATAAA	-17	NA	65725022	65745658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65725235_65725379_65725456_65726477_65726640_65727264_65727404_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.88	chr15	+	3868	10	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	42948	-2552	2018	-6	3prime_fragment	FALSE	canonical	3	451	junction_3	67.1324469396042	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65725030	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.89	chr15	+	2225	9	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	44393	-1332	-875	-1226	3prime_fragment	FALSE	canonical	3	451	junction_2	71.1397172822608	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65726475	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.90	chr15	+	7104	6	NNC	ENSMUSG00000092495.2	novel	229	2	NA	NA	-405	15458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.922355382259	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGCATTTTTATTAT	NA	False	NA	15	True	AATAAA	-22	NA	65729312	65745663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_65733147_65733187_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.91	chr15	+	6319	5	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	48053	-2553	779	-5	3prime_fragment	FALSE	canonical	3	469	junction_1	49.6210640756524	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	False	NA	12	True	AATAAA	-19	NA	65730135	65745660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.92	chr15	+	3183	2	Intergenic	novelGene_10040	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-17	NA	65730684	65736969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_65730979_65734080
ES.11997.93	chr15	+	4895	3	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	5913	-1226	intron_retention	FALSE	canonical	3	477	junction_1	58.5	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65735269	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65738677_65739118_65739169_65743001
ES.11997.94	chr15	+	3871	4	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	53413	-1331	6139	-1227	3prime_fragment	FALSE	canonical	3	477	junction_2	48.187135212627	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGGAAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	65735495	65744438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65737776_65738572_65738677_65739118_65739169_65743001
ES.11997.95	chr15	+	7466	3	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	54872	-2552	7598	-6	intron_retention	FALSE	canonical	3	477	junction_2	22.5	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAGTGCATTTTTA	NA	False	NA	11	True	AATAAA	-18	NA	65736954	65745659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_65737776_65738572_65738677_65739118
ES.11997.96	chr15	+	5529	1	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	9554	-1226	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65738910	65744439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_65738900_65744400
ES.11998.1	chr15	-	340	1	Intergenic	novelGene_10038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAAATCAGGTTCATAA	NA	False	NA	NA	False	NA	NA	NA	65727076	65726736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_65726700_65727100
ES.11998.2	chr15	-	182	1	Intergenic	novelGene_10039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTACAAATACATAAC	NA	False	NA	NA	False	NA	NA	NA	65727076	65726894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_65726900_65727100
ES.11999.1	chr15	-	1393	10	NNC	ENSMUSG00000015001.18	novel	1909	15	NA	NA	3725	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.31468439624436	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTCGTGTCAAGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	65769685	65747900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_65748437_65750575_65750683_65753352_65753525_65754373_65754488_65755669_65755724_65759944_65759996_65761256_65761296_65761433_65761563_65764200_65764314_65769607
ES.11999.2	chr15	-	4710	5	NNC	ENSMUSG00000015001.18	novel	659	8	NA	NA	520	-3	intron_retention	FALSE	canonical	0	0	junction_2	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTTGTGTCGTGTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	65760967	65747904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_65748437_65750575_65754488_65755669_65755724_65759944_65759996_65760806
ES.12.1	chr1	+	2260	1	Antisense	novelGene_ENSMUSG00000033845.14_AS_novelGene_ENSMUSG00000102275.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAACAAAAC	3644	False	NA	NA	False	TTTAAA	-33	NA	4849242	4851502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_4849200_4851500
ES.120.1	chr1	-	8420	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	-162	-3361	-162	-9	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTAATGTGGCGATAC	NA	False	NA	-8	True	AATAAA	-33	NA	13444469	13209337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.10	chr1	-	8233	23	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	-11	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	19.7229257883533	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	-19	True	AATAAA	-22	NA	13442674	13209348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13421438_13421510_13442406
ES.120.12	chr1	-	8128	22	FSM	ENSMUSG00000005886.15	ENSMUST00000081713.11	8171	22	-10	53	-10	1	multi-exon	FALSE	canonical	0	0	junction_21	16.7828602774667	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTAATAAATTTTAATG	NA	False	NA	-52	True	AATAAA	-19	NA	13442673	13209381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13442406
ES.120.14	chr1	-	7198	21	NNC	ENSMUSG00000005886.15	novel	8006	22	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.8849189085598	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTAATAAATTTTAAT	NA	False	NA	-53	True	AATAAA	-18	NA	13444261	13209382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13244973_13245456_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13356192_13356250_13444161
ES.120.16	chr1	-	8140	22	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_21	15.9131714294578	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCATTTAATAAATTTTA	NA	False	NA	-55	True	AATAAA	-16	NA	13444096	13209384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
ES.120.17	chr1	-	5995	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-18	1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	19.9824819974111	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGATGGTTGTTTTCT	NA	False	NA	-1	True	AATAAA	-30	NA	13444271	13211493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13260310_13260415_13291530_13291704_13294832_13294938_13317372_13317480_13356192_13356250_13444161
ES.120.18	chr1	-	6044	22	FSM	ENSMUSG00000005886.15	ENSMUST00000068304.13	8006	22	-150	2112	-150	1204	multi-exon	FALSE	canonical	3	14	junction_10	11.9773027979143	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGATGGTTGTTTTC	NA	False	NA	-2	True	AATAAA	-29	NA	13444457	13211494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.19	chr1	-	6408	24	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-148	1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.55068275106	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTTTGATGGTTGTTT	NA	False	NA	-4	True	AATAAA	-27	NA	13444455	13211496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13213217_13213379_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.2	chr1	-	6740	13	NIC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-29504	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	17.1358947501696	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGATTTTAATGTGGC	8782	False	NA	-13	True	AATAAA	-28	NA	13250746	13209342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704
ES.120.20	chr1	-	6294	25	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	1	1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	21.4686059553634	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTTTGATGGTTGTTT	NA	False	NA	-4	True	AATAAA	-27	NA	13444252	13211496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13269391_13269535_13291530_13291704_13294832_13294938_13317372_13317480_13356192_13356250_13444161
ES.120.21	chr1	-	6109	23	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	-18	1201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	19.7229257883533	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCACTTTGATGGTTGTT	NA	False	NA	-5	True	AATAAA	-26	NA	13442681	13211497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13375852_13375942_13442406
ES.120.22	chr1	-	5885	22	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	314	1201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	19.4792755735615	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCACTTTGATGGTTGTT	NA	False	NA	-5	True	AATAAA	-26	NA	13443939	13211497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226775_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
ES.120.23	chr1	-	5613	12	ISM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	204845	-1200	-18220	1200	3prime_fragment	FALSE	canonical	3	44	junction_3	6.34542849695096	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCACTTTGATGGTTGT	NA	False	NA	-6	True	AATAAA	-25	NA	13239462	13211498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119
ES.120.24	chr1	-	6002	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-10	1195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.6022430829815	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGCCCACTTTGATG	NA	False	NA	-11	True	AATAAA	-20	NA	13444263	13211503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13213217_13213379_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.25	chr1	-	6098	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	9	1195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	14.1495115705791	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGCCCACTTTGATG	NA	False	NA	-11	True	AATAAA	-20	NA	13444298	13211503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235342_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.26	chr1	-	5844	22	NNC	ENSMUSG00000005886.15	novel	8171	22	NA	NA	334	1195	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_21	15.9131714294578	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGCCCACTTTGATG	NA	False	NA	-11	True	AATAAA	-20	NA	13443919	13211503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
ES.120.27	chr1	-	5566	24	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-17	1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.8385232556773	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCAGCCCACTTTGAT	NA	False	NA	-12	True	AATAAA	-19	NA	13444270	13211504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13244969_13245456_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.28	chr1	-	6005	22	FSM	ENSMUSG00000005886.15	ENSMUST00000081713.11	8171	22	-10	2176	-10	1194	multi-exon	FALSE	canonical	0	0	junction_21	16.7828602774667	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCAGCCCACTTTGAT	NA	False	NA	-12	True	AATAAA	-19	NA	13442673	13211504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13442406
ES.120.29	chr1	-	6163	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	-73	-1193	-73	1193	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGCAGCCCACTTTGA	NA	False	NA	-13	True	AATAAA	-18	NA	13444380	13211505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.30	chr1	-	6187	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	195	1192	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	13.1208621970276	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAAGCAGCCCACTTTG	NA	False	NA	-14	True	AATAAA	-17	NA	13444058	13211506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
ES.120.31	chr1	-	6461	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-739	1191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	22.0230908122729	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTAAGCAGCCCACTTT	NA	False	NA	-15	True	AATAAA	-16	NA	13443402	13211507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13314882_13314963_13356192_13356250_13442756
ES.120.32	chr1	-	5922	23	NIC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	15	1187	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	19.4944895795438	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATTACTAAGCAGCCCA	NA	False	NA	-19	True	AATAAA	-12	NA	13444292	13211511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13369886_13369947_13444161
ES.120.33	chr1	-	5844	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	37	-984	-17	984	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCAATGTCTCCTAAAG	NA	False	NA	NA	False	ATTAAA	-12	NA	13444270	13211714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.34	chr1	-	3271	13	FSM	ENSMUSG00000005886.15	ENSMUST00000147927.8	3429	13	37	121	-17	-121	multi-exon	FALSE	canonical	3	49	junction_10	7.98783797754784	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTGGTGCTTGTTAGT	NA	False	NA	NA	False	AATAAA	-2	NA	13444270	13234845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.35	chr1	-	3180	14	NNC	ENSMUSG00000005886.15	novel	3429	13	NA	NA	-12	-479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	25.427469654249	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTCAGTGATACCTCAG	NA	False	NA	NA	False	NA	NA	NA	13442675	13235203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13317372_13317480_13356192_13356250_13442406
ES.120.36	chr1	-	4479	6	ISM	ENSMUSG00000005886.15	ENSMUST00000143603.8	3804	13	187199	5626	-35812	-5626	internal_fragment	FALSE	canonical	3	51	junction_4	3.49857113690718	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2474	False	NA	NA	False	NA	NA	NA	13257054	13241774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956
ES.120.37	chr1	-	6812	10	NIC	ENSMUSG00000005886.15	novel	3429	13	NA	NA	1	-5628	intron_retention	FALSE	canonical	3	49	junction_7	7.83156008298049	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13444252	13241776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.38	chr1	-	1991	9	ISM	ENSMUSG00000005886.15	ENSMUST00000147927.8	3429	13	46	15141	-8	2642	5prime_fragment	FALSE	canonical	3	49	junction_6	8.24621125123532	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAACAAATAATCAA	NA	False	NA	NA	False	NA	NA	NA	13444261	13249865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.39	chr1	-	188	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGCTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	13261113	13260925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13260900_13261100
ES.120.4	chr1	-	8283	24	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	4	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	17.7069187507204	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGAGATTTTAATGTGG	NA	False	NA	-14	True	AATAAA	-27	NA	13444249	13209343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13375852_13375942_13444161
ES.120.5	chr1	-	8007	22	FSM	ENSMUSG00000005886.15	ENSMUST00000068304.13	8006	22	37	-38	-17	-16	multi-exon	FALSE	canonical	3	14	junction_10	11.9773027979143	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAGAGATTTTAATGTG	NA	False	NA	-15	True	AATAAA	-26	NA	13444270	13209344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.6	chr1	-	8396	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-165	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.1419164773694	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAGAGATTTTAATG	NA	False	NA	-17	True	AATAAA	-24	NA	13444472	13209346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221125_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ES.120.7	chr1	-	8350	23	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	190	-20	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	13.1208621970276	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	-19	True	AATAAA	-22	NA	13444063	13209348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13443814
ES.120.8	chr1	-	8370	23	NIC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-12	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	14.1473941180197	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	-19	True	AATAAA	-22	NA	13442675	13209348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13442406
ES.120.9	chr1	-	8310	24	NNC	ENSMUSG00000005886.15	novel	4897	23	NA	NA	-10	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	17.1053667829377	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	NA	False	NA	-19	True	AATAAA	-22	NA	13444263	13209348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13317372_13317480_13356192_13356250_13444161
ES.1200.1	chr1	-	2312	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432547	119398034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ES.1200.10	chr1	-	2298	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	154	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	518.492661471693	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119432370	119398039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430551_119430720_119432306
ES.1200.11	chr1	-	1981	1	NIC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	5789	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119400020	119398039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119398000_119400000
ES.1200.12	chr1	-	2282	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	160	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	506.240812262307	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119432364	119398039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430561_119430720_119432306
ES.1200.13	chr1	-	2287	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	247	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	506.498015790783	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119432277	119398039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430561_119430753_119432247
ES.1200.14	chr1	-	2478	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	517.013964995144	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATTTCGCCCTTTTTCC	NA	False	NA	-9	True	AATAAA	-16	NA	119432517	119398039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430551_119430753_119432306
ES.1200.16	chr1	-	1195	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	69	1025	69	815	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGGTGGTGCACCCCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	119432455	119399059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ES.1200.2	chr1	-	2056	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	163	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	419.874933760042	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGCCCTTTTTCCTGCA	NA	False	NA	-5	True	AATAAA	-20	NA	119432361	119398035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119398951_119399019_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ES.1200.3	chr1	-	2128	5	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	218	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	456.372312372256	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCGCCCTTTTTCCTGC	NA	False	NA	-6	True	AATAAA	-19	NA	119432306	119398036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432247
ES.1200.4	chr1	-	1937	4	NIC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	185	-4	combination_of_known_splicesites	TRUE	canonical	2	24	junction_3	489.375792889949	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	119432339	119398038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119399556_119403624_119403803_119405644_119405854_119432306
ES.1200.5	chr1	-	1882	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	49	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.874933760042	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	119432475	119398038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119398484_119398837_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ES.1200.6	chr1	-	2501	8	Fusion	ENSMUSG00000098447.3_ENSMUSG00000004451.15	novel	2289	5	NA	NA	-29	-4	multi-exon	FALSE	canonical	0	0	junction_4	526.918457851393	655	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	119454118	119398038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119448474_119448600_119452675_119452814_119453862_119454007_119454091
ES.1200.7	chr1	-	2449	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	504.701495935964	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	119432497	119398038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430561_119430753_119432306
ES.12000.1	chr15	-	180	1	Intergenic	novelGene_10041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	65806029	65805849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_65805800_65806000
ES.12001.1	chr15	+	3848	1	Intergenic	novelGene_10042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66321846	66325694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_66321800_66325700
ES.12002.1	chr15	-	2039	12	FSM	ENSMUSG00000022375.7	ENSMUST00000023006.7	2084	12	38	7	38	-7	multi-exon	FALSE	canonical	0	0	junction_1	0.445361771415123	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGATTTCCTCAGGGTG	NA	False	NA	NA	False	NA	NA	NA	66372721	66251713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_66252421_66268829_66268916_66309443_66309540_66310204_66310275_66314006_66314073_66319442_66319521_66321291_66321484_66325917_66326145_66341665_66341839_66353089_66353168_66361321_66361490_66372623
ES.12003.1	chr15	+	181	1	Intergenic	novelGene_10043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	66393967	66394148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_66394000_66394100
ES.12004.1	chr15	+	3297	9	ISM	ENSMUSG00000072501.6	ENSMUST00000229576.2	5094	22	-50	31944	-30	1	5prime_fragment	FALSE	canonical	3	13	junction_7	18.8878267675241	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCTAATTACTTTC	3800	False	NA	NA	False	AATAAA	-17	NA	66449378	66483466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374
ES.12004.11	chr15	+	5275	21	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	1	273	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	19.5420060382756	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCATGTGTGGAGTAAAT	3831	False	NA	NA	False	ATTAAA	-32	NA	66449409	66515683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.13	chr15	+	2349	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	-17	34472	3	-833	5prime_fragment	FALSE	canonical	3	18	junction_5	17.128565471225	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATGTCAATCTTTCA	3833	False	NA	NA	False	AATAAA	-18	NA	66449411	66482632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ES.12004.14	chr15	+	3271	9	NNC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.2270733212839	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTAATTACTTTCCTG	3833	False	NA	NA	False	AATAAA	-20	NA	66449411	66483469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66473927_66474013_66475875_66476090_66476628_66476755_66481374
ES.12004.15	chr15	+	3056	7	NNC	ENSMUSG00000072501.6	novel	3203	13	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.5712512186809	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGGCTCTAATTACTT	3841	False	NA	NA	False	AATAAA	-15	NA	66449419	66483464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451921_66452038_66466655_66466832_66469546_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.16	chr15	+	4117	7	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	5	-1523	intron_retention	FALSE	canonical	3	36	junction_1	11.8708326020826	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTTTAAGGGTCTG	3841	False	NA	NA	False	NA	NA	NA	66449419	66481942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.17	chr15	+	1961	8	NIC	ENSMUSG00000072501.6	novel	3203	13	NA	NA	5	496	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	16.8982549515671	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGCCATTCATTTA	3841	False	NA	NA	False	AATAAA	-11	NA	66449419	66477542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476628
ES.12004.18	chr15	+	7320	21	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	5	275	intron_retention	FALSE	canonical	2	5	junction_13	19.9506265565771	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTGTGGAGTAAATTT	3841	False	NA	NA	False	ATTAAA	-34	NA	66449419	66515685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66487258_66487486_66487697_66494609_66494667_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.19	chr15	+	2810	10	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	-6	-1484	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	21.9291789378647	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATATTGGTTTGTTTGT	3844	False	NA	NA	False	ACTAAA	-23	NA	66449422	66486439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869
ES.12004.2	chr15	+	5212	20	FSM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	-47	1419	-27	275	multi-exon	FALSE	canonical	3	6	junction_12	19.3425170024203	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTGTGGAGTAAATTT	3803	False	NA	NA	False	ATTAAA	-34	NA	66449381	66515685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.20	chr15	+	5368	22	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	-4	273	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	19.350449847408	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCATGTGTGGAGTAAAT	3846	False	NA	NA	False	ATTAAA	-32	NA	66449424	66515683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.21	chr15	+	6413	20	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	-3	-177	combination_of_known_junctions	FALSE	canonical	3	6	junction_12	19.3425170024203	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTTGGTTAATAGCAT	3847	False	NA	NA	False	AATAAA	-21	NA	66449425	66516927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.23	chr15	+	6927	19	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	0	6	intron_retention	FALSE	canonical	1	4	junction_15	20.5426385841741	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTCAGCTTGCCTTT	3850	False	NA	NA	False	ATTAAA	-17	NA	66449428	66515416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502895_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.24	chr15	+	4649	8	NNC	ENSMUSG00000072501.6	novel	3203	13	NA	NA	3	3162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.8798010452178	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATCTACATGCCTT	3853	False	NA	NA	False	NA	NA	NA	66449431	66480208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476594
ES.12004.25	chr15	+	3276	9	NNC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.0762174069744	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTCTAATTACTTTCC	3853	False	NA	NA	False	AATAAA	-18	NA	66449431	66483467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476594_66476755_66481374
ES.12004.26	chr15	+	1719	9	ISM	ENSMUSG00000072501.6	ENSMUST00000229576.2	5094	22	3	33469	3	-1524	5prime_fragment	FALSE	canonical	3	13	junction_7	18.8878267675241	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTTTTAAGGGTCT	3853	False	NA	NA	False	NA	NA	NA	66449431	66481941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374
ES.12004.27	chr15	+	3315	19	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	3	187	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	20.4191419512352	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATATGGAGTCATAATT	3853	False	NA	NA	False	AATGAA	-20	NA	66449431	66509143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532
ES.12004.28	chr15	+	3159	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	4	33641	4	-2	5prime_fragment	FALSE	canonical	3	18	junction_5	17.128565471225	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGCTCTAATTACT	3854	False	NA	NA	False	AATAAA	-14	NA	66449432	66483463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ES.12004.29	chr15	+	3037	18	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	4	8145	4	3	5prime_fragment	FALSE	canonical	3	6	junction_12	20.2171601372161	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCTTAAAGATTTGTT	3854	False	NA	NA	False	ATTAAA	-35	NA	66449432	66508959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532
ES.12004.30	chr15	+	2605	9	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	7	-1602	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	21.9769054919022	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTGTGTTAACATC	3857	False	NA	NA	False	ATTAAA	-9	NA	66449435	66486321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476625_66476755_66481374_66481458_66484869
ES.12004.31	chr15	+	3251	9	NNC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.248595461287	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3857	False	NA	NA	False	AATAAA	-16	NA	66449435	66483465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451921_66452038_66466636_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.32	chr15	+	6481	21	NIC	ENSMUSG00000072501.6	novel	9383	21	NA	NA	8	-185	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	19.4681791649861	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTCACTGTCTTGGTT	3858	False	NA	NA	False	AATAAA	-13	NA	66449436	66516919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.33	chr15	+	4964	21	NNC	ENSMUSG00000072501.6	novel	9383	21	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	20.4471880707348	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAATTTCAGCTTGCCT	3858	False	NA	NA	False	ATTAAA	-15	NA	66449436	66515414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487064_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.34	chr15	+	6823	21	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	9	-182	intron_retention	FALSE	canonical	2	5	junction_13	19.8148303045976	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCACTGTCTTGGTTAAT	3859	False	NA	NA	False	AATAAA	-16	NA	66449437	66516922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.38	chr15	+	2957	12	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	-12	942	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.9152228445749	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTCTTTGACAGTTA	3863	False	NA	NA	False	AGTAAA	-28	NA	66449441	66509898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532
ES.12004.39	chr15	+	4620	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	33	-1390	-12	1390	multi-exon	FALSE	canonical	3	27	junction_5	13.8834433769148	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTATTCAGGCGATT	3863	False	NA	NA	False	NA	NA	NA	66449441	66484855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.4	chr15	+	3296	9	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	20.8326666559997	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCTAATTACTTTC	3813	False	NA	NA	False	AATAAA	-17	NA	66449391	66483466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374
ES.12004.41	chr15	+	3266	9	NNC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	19.7859640907387	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTCTAATTACTTTC	3865	False	NA	NA	False	AATAAA	-17	NA	66449443	66483466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469488_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.42	chr15	+	3445	8	NIC	ENSMUSG00000072501.6	novel	3203	13	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	14	junction_1	17.3487634094403	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGCTCTAATTACT	3871	False	NA	NA	False	AATAAA	-14	NA	66449449	66483463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469604_66475875_66476090_66476628_66476755_66481374
ES.12004.43	chr15	+	6534	21	NIC	ENSMUSG00000072501.6	novel	9383	21	NA	NA	-2	-184	combination_of_known_junctions	FALSE	canonical	1	4	junction_17	20.0571682946522	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCACTGTCTTGGTTA	3873	False	NA	NA	False	AATAAA	-14	NA	66449451	66516920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502895_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.44	chr15	+	6564	22	NNC	ENSMUSG00000072501.6	novel	9383	21	NA	NA	5	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.9066984703875	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCACTGTCTTGGTTA	3880	False	NA	NA	False	AATAAA	-14	NA	66449458	66516920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495616_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.47	chr15	+	6279	19	NNC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	2560	273	intron_retention	FALSE	canonical	0	0	junction_15	21.4188102400382	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCATGTGTGGAGTAAAT	6435	False	NA	NA	False	ATTAAA	-32	NA	66452013	66515683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66452038_66466655_66466828_66466963_66467049_66469207_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502920_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.48	chr15	+	4363	1	Intergenic	novelGene_10044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAATGTTCTTAAC	NA	False	NA	NA	False	GGGGCT	-29	NA	66461446	66465809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_66461400_66465800
ES.12004.49	chr15	+	2571	1	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	3361	-1523	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTTTAAGGGTCTG	NA	False	NA	NA	False	NA	NA	NA	66479371	66481942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66479400_66481900
ES.12004.5	chr15	+	5308	21	NNC	ENSMUSG00000072501.6	novel	9383	21	NA	NA	-17	270	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	20.3014162067576	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCATGTGTGGAGTA	3813	False	NA	NA	False	ATTAAA	-29	NA	66449391	66515680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469488_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.50	chr15	+	3991	2	FSM	ENSMUSG00000072501.6	ENSMUST00000229486.2	1752	2	-92	-2147	-92	-4	multi-exon	FALSE	canonical	3	14	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGCTTTTAAGTTAGCT	NA	False	NA	NA	False	NA	NA	NA	66485850	66490070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_66487258_66487486
ES.12004.51	chr15	+	7078	7	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	4928	-2706	intron_retention	FALSE	canonical	2	5	junction_1	7.31816613336672	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATGAAAATTGAGCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	66491407	66512704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66495733_66495840_66495949_66500773_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761
ES.12004.52	chr15	+	6807	3	ISM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	54025	182	717	-182	intron_retention	FALSE	canonical	3	17	junction_1	3	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCACTGTCTTGGTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	66503453	66516922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66504751_66508532_66508882_66511761
ES.12004.53	chr15	+	3449	2	ISM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	62327	178	9019	-178	3prime_fragment	FALSE	canonical	3	20	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCTTGGTTAATAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	66511755	66516926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66511925_66513646
ES.12004.54	chr15	+	3459	1	NIC	ENSMUSG00000072501.6	novel	6665	21	NA	NA	9488	273	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCATGTGTGGAGTAAAT	NA	False	NA	NA	False	ATTAAA	-32	NA	66512224	66515683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66512200_66515700
ES.12004.6	chr15	+	3247	19	ISM	ENSMUSG00000072501.6	ENSMUST00000229160.2	9383	21	-37	10775	-17	94	5prime_fragment	FALSE	canonical	3	6	junction_13	19.8917595693652	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTCAGTTCCTAAACA	3813	False	NA	NA	False	AATACA	-17	NA	66449391	66509050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532
ES.12004.7	chr15	+	5511	21	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	-10	272	intron_retention	FALSE	canonical	0	0	junction_17	20.8261254197702	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCATGTGTGGAGTAAA	3820	False	NA	NA	False	ATTAAA	-31	NA	66449398	66515682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504668_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.8	chr15	+	6397	21	NIC	ENSMUSG00000072501.6	novel	5094	22	NA	NA	-6	-176	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	20.0820815654155	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTGGTTAATAGCATC	3824	False	NA	NA	False	AATAAA	-22	NA	66449402	66516928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_66449697_66451917_66452038_66466655_66466828_66466951_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66487068_66487258_66487486_66487697_66494609_66494667_66495609_66495733_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12004.9	chr15	+	5265	21	FSM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	-19	1419	1	275	multi-exon	FALSE	canonical	3	6	junction_13	19.2823753723446	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTGTGGAGTAAATTT	3831	False	NA	NA	False	ATTAAA	-34	NA	66449409	66515685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ES.12005.1	chr15	+	1439	1	ISM	ENSMUSG00000072501.6	ENSMUST00000229160.2	9383	21	68952	6	15644	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTTTTTCATTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	66518380	66519819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66518400_66519800
ES.12006.1	chr15	+	969	1	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	30911	2	12920	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTTGATTTGGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	66794079	66795048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_66794100_66795000
ES.12007.1	chr15	-	3797	15	NIC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	22	junction_12	7.36511357408585	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	False	NA	0	True	AATAAA	-18	NA	66841488	66801166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_66802958_66805712_66805765_66808101_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ES.12007.2	chr15	-	2934	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	-48	3	-48	-3	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGTGTCTTTTCCTC	NA	False	NA	-3	True	AATAAA	-15	NA	66841537	66801169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ES.12007.3	chr15	-	2871	14	NNC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	-1857	-4	intron_retention	FALSE	canonical	0	0	junction_13	12.5698050899765	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGTGTCTTTTCCT	9461	False	NA	-4	True	AATAAA	-14	NA	66822185	66801170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66821945
ES.12007.4	chr15	-	2882	16	NNC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_13	11.8122347118947	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGTGTCTTTTCCT	NA	False	NA	-4	True	AATAAA	-14	NA	66841488	66801170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820328_66831206_66831247_66832320_66832402_66841352
ES.12007.6	chr15	-	3027	17	NIC	ENSMUSG00000005125.14	novel	2889	16	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_13	14.6367474187403	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTTGTGTCTTTTCC	NA	False	NA	-5	True	AATAAA	-13	NA	66841488	66801171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66820965_66821110_66831210_66831247_66832320_66832402_66841352
ES.12007.8	chr15	-	4710	4	NIC	ENSMUSG00000005125.14	novel	577	11	NA	NA	-3432	-7	intron_retention	FALSE	canonical	3	38	junction_1	5.90668171555645	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTGGCTTGTGTCTTTT	3461	False	NA	-7	True	AATAAA	-11	NA	66809750	66801173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_66805765_66808101_66808138_66809046_66809095_66809715
ES.12008.1	chr15	+	704	1	Intergenic	novelGene_10045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTAACTCTGGTTC	NA	False	NA	NA	False	ATTAAA	-10	NA	66943194	66943898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_66943200_66943900
ES.12009.1	chr15	-	2254	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	62	3416	12	-6	multi-exon	FALSE	canonical	1	1	junction_4	1.93649167310371	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTGAACATTTCCCG	NA	False	NA	NA	False	AATAAA	-21	NA	67048617	66978139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
ES.1201.1	chr1	+	9038	1	Antisense	novelGene_ENSMUSG00000026383.15_AS_novelGene_ENSMUSG00000102687.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCAAAAAACAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	119550388	119559426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_119550400_119559400
ES.1201.2	chr1	+	5243	2	Antisense	novelGene_ENSMUSG00000102687.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGATGAGGTTTGACCA	NA	False	NA	NA	False	NA	NA	NA	119550388	119565205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_119551701_119561274
ES.12010.1	chr15	-	181	1	Intergenic	novelGene_10046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAAATATATTTCC	NA	False	NA	NA	False	NA	NA	NA	67468031	67467850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_67467800_67468000
ES.12011.1	chr15	+	2469	1	Intergenic	novelGene_10048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	68032518	68034987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_68032500_68035000
ES.12012.1	chr15	-	4534	16	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-64	61	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	5.94194132137525	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCCTTCTTTGGGGC	NA	False	NA	NA	False	AATAAA	-16	NA	68130769	67955551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
ES.12012.10	chr15	-	4420	16	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	170	44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	9.25106600464088	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGTGCCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	68130466	67955568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130310
ES.12012.11	chr15	-	5241	15	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-20	39	intron_retention	FALSE	canonical	3	15	junction_12	6.13454587245254	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	68130725	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
ES.12012.12	chr15	-	4523	16	FSM	ENSMUSG00000022335.18	ENSMUST00000160248.8	3866	16	-60	-597	-42	39	multi-exon	FALSE	canonical	0	0	junction_3	8.74731704899025	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	68130747	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982292_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
ES.12012.13	chr15	-	2690	5	ISM	ENSMUSG00000022335.18	ENSMUST00000162054.9	4388	16	138409	-39	138340	39	3prime_fragment	FALSE	canonical	3	24	junction_2	4.96865172858795	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	67992296	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784
ES.12012.14	chr15	-	4615	17	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-11	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.904235129068	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	68130716	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68053120_68053277_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130516
ES.12012.15	chr15	-	4647	18	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	216	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.2351633980473	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	68130420	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67971713_67971764_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68125430_68125510_68130161
ES.12012.16	chr15	-	4255	15	NIC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	0	39	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	8.98098899149231	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGCATCTGTGCCT	NA	False	NA	NA	False	AATAAA	-42	NA	68130698	67955573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68084441_68084694_68096615_68096793_68130516
ES.12012.17	chr15	-	3932	14	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	46081	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.9409217454284	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATAAAAGCATCTGTG	NA	False	NA	NA	False	AATAAA	-39	NA	68084555	67955576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_68018351_68018441_68037601_68037776_68040563_68040714_68040804_68040935_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441
ES.12012.18	chr15	-	1949	1	Intergenic	novelGene_10047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCCTGTCCCTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	68034447	68032498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_68032500_68034400
ES.12012.19	chr15	-	1245	4	ISM	ENSMUSG00000022335.18	ENSMUST00000160248.8	3866	16	-62	102332	-44	-6756	5prime_fragment	FALSE	canonical	3	15	junction_1	5.31245915016974	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAAGTTTCTATCTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	68130749	68058502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_68059086_68084441_68084694_68096615_68096793_68130516
ES.12012.2	chr15	-	4579	16	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	166	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	9.06127290542927	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTGTTCCTTGTCC	NA	False	NA	NA	False	AATAAA	-5	NA	68130470	67955562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130161
ES.12012.3	chr15	-	4480	16	FSM	ENSMUSG00000022335.18	ENSMUST00000162054.9	4388	16	-42	-50	-42	50	multi-exon	FALSE	canonical	3	9	junction_13	6.94742158406028	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTGTTCCTTGTCC	NA	False	NA	NA	False	AATAAA	-5	NA	68130747	67955562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084462_68084694_68096615_68096793_68130516
ES.12012.4	chr15	-	4324	15	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	168	49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	11.0548262615687	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGCCTGTTCCTTGTC	NA	False	NA	NA	False	AATAAA	-4	NA	68130468	67955563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130324
ES.12012.5	chr15	-	4440	16	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	141	49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	9.25106600464088	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGCCTGTTCCTTGTC	NA	False	NA	NA	False	AATAAA	-4	NA	68130495	67955563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130324
ES.12012.6	chr15	-	3565	13	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	207	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	12.2802913465258	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGTGCCTGTTCCTTG	NA	False	NA	NA	False	AATAAA	-2	NA	68130429	67955565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68052932_68096771_68096793_68130310
ES.12012.7	chr15	-	4845	18	NNC	ENSMUSG00000022335.18	novel	4388	16	NA	NA	-20	47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	12.189961267754	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGTGCCTGTTCCTTG	NA	False	NA	NA	False	AATAAA	-2	NA	68130725	67955565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68118696_68118913_68121083_68121237_68130516
ES.12012.9	chr15	-	4444	16	NNC	ENSMUSG00000022335.18	novel	3866	16	NA	NA	167	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.8320512061813	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGTGCCTGTTCCTT	NA	False	NA	NA	False	AATAAA	-1	NA	68130469	67955566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_67956411_67973319_67973451_67976804_67976929_67982292_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084441_68084694_68096615_68096793_68130324
ES.12013.1	chr15	-	3136	1	Intergenic	novelGene_10049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCGAGGCACTGTCAC	NA	False	NA	NA	False	NA	NA	NA	68134234	68131098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_68131100_68134200
ES.12014.1	chr15	-	3890	1	Intergenic	novelGene_10050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTTTTGCTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	68168835	68164945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_68164900_68168800
ES.12015.1	chr15	+	571	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	-36	-52	-36	52	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATTTTCATAATTGC	NA	False	NA	NA	False	AATAAA	-35	NA	68181631	68182202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_68181600_68182200
ES.12016.1	chr15	-	4174	1	Intergenic	novelGene_10051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTCTCCTCTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	68219782	68215608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_68215600_68219800
ES.12017.1	chr15	+	1966	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	-75	-4	-75	4	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTGTGTGTGAGCT	NA	False	NA	11	True	AATAAA	-11	NA	68800193	68965365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ES.12017.10	chr15	+	1696	8	NIC	ENSMUSG00000022332.9	novel	1887	9	NA	NA	120	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	109.563885007603	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTGTGTGTGTG	NA	False	NA	7	True	AATAAA	-7	NA	68800400	68965361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68964749
ES.12017.11	chr15	+	673	2	ISM	ENSMUSG00000022332.9	ENSMUST00000230847.2	1344	7	162435	-2	161064	0	3prime_fragment	FALSE	canonical	3	311	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTGTGTGTGTG	NA	False	NA	7	True	AATAAA	-7	NA	68962980	68965361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_68963042_68964749
ES.12017.2	chr15	+	1533	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	-53	407	-53	-405	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGATGGAACTTAAAGCC	NA	False	NA	14	True	AATAAA	-20	NA	68800215	68964954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ES.12017.4	chr15	+	1501	9	NNC	ENSMUSG00000022332.9	novel	1887	9	NA	NA	-15	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	108.157798493682	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGATGGAACTTAAAG	NA	False	NA	12	True	AATAAA	-18	NA	68800253	68964952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963058_68964757
ES.12017.5	chr15	+	3183	10	FSM	ENSMUSG00000022332.9	ENSMUST00000229234.2	2861	10	-316	-6	-15	6	multi-exon	FALSE	canonical	0	0	junction_9	102.526359152111	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTATTTTAATATAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	68800253	68973066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749_68966366_68972789
ES.12017.6	chr15	+	1651	10	NNC	ENSMUSG00000022332.9	novel	1887	9	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	102.526359152111	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTGTGTGTGTG	NA	False	NA	7	True	AATAAA	-7	NA	68800257	68965361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_68800280_68800526_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ES.12017.7	chr15	+	1673	7	NIC	ENSMUSG00000022332.9	novel	1887	9	NA	NA	-2	20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	123.867424647842	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACGATTTCATGTTTT	NA	False	NA	27	True	AATAAA	-27	NA	68800266	68965381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_68800683_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ES.12017.8	chr15	+	1567	9	NNC	ENSMUSG00000022332.9	novel	1887	9	NA	NA	9	-407	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	107.837551437336	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGATGGAACTTAAAG	NA	False	NA	12	True	AATAAA	-18	NA	68800289	68964952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964639
ES.12017.9	chr15	+	1856	10	NNC	ENSMUSG00000022332.9	novel	2861	10	NA	NA	39	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	102.526359152111	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGTATTGTAGCTAAT	NA	False	NA	NA	False	AAGAAA	-37	NA	68800319	68973026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749_68965366_68973010
ES.12018.1	chr15	-	178	1	Intergenic	novelGene_10052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	68862559	68862381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_68862400_68862600
ES.12019.1	chr15	-	177	1	Intergenic	novelGene_10053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACACTA	NA	False	NA	NA	False	NA	NA	NA	70004208	70004031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_70004000_70004200
ES.1202.1	chr1	-	3794	1	Genic_Genomic	ENSMUSG00000026383.15	novel	NA	NA	NA	NA	34432	2838	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATACACACACACAC	NA	False	NA	NA	False	CATAAA	-11	NA	119473722	119469928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_119469900_119473700
ES.1202.10	chr1	-	6475	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.9421096974698	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTTATGAGCTGTTT	NA	False	NA	-9	True	AATAAA	-15	NA	119576679	119472764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527989_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.11	chr1	-	6408	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	19.5291804459094	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTTTATGAGCTGT	NA	False	NA	-11	True	AATAAA	-13	NA	119576655	119472766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476903_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.12	chr1	-	10242	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	25.9205182025531	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTTTATGAGCTGT	NA	False	NA	-11	True	AATAAA	-13	NA	119576678	119472766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119565171_119570206_119570389_119576514
ES.1202.13	chr1	-	6363	24	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	20.3858804318819	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATGTTTTATGAGCTG	NA	False	NA	-12	True	AATAAA	-12	NA	119576686	119472767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.14	chr1	-	6515	25	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_24	18.7778959151445	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATGTTTTATGAGCTG	NA	False	NA	-12	True	AATAAA	-12	NA	119576372	119472767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576146
ES.1202.15	chr1	-	5924	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	-528	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.1973938480085	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119576679	119473294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.16	chr1	-	5771	23	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	-528	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	20.9353589937777	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119576679	119473294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.19	chr1	-	5944	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	15	-529	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	24.9245737175182	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGCTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	119576332	119473295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576146
ES.1202.2	chr1	-	6520	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-64	-14	0	14	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCTTGAGCATGAA	NA	False	NA	3	True	AATAAA	-27	NA	119576730	119472752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.20	chr1	-	5773	24	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	9	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.8909440768809	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGATGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	119576655	119473297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570202_119570389_119576514
ES.1202.21	chr1	-	5228	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-62	1276	2	-1276	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACATAGTTTCTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119576728	119474042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.22	chr1	-	3371	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	13	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.1973938480085	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGTTAAAGTAGTACC	NA	False	NA	NA	False	NA	NA	NA	119576679	119475847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.23	chr1	-	3225	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-13	3230	-13	-136	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGCAGAAATGGGGAA	NA	False	NA	NA	False	AAGAAA	-3	NA	119576679	119475996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.24	chr1	-	2618	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	-14	3838	-14	-744	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGCTCCACCTAGCGG	NA	False	NA	NA	False	AATGAA	-21	NA	119576680	119476604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.25	chr1	-	3243	17	ISM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	2	32284	0	816	5prime_fragment	FALSE	canonical	3	78	junction_15	8.83087623059003	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGTTTGTCAGATATT	NA	False	NA	NA	False	AATAAA	-18	NA	119576664	119505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.26	chr1	-	2108	1	FSM	ENSMUSG00000026383.15	ENSMUST00000187239.2	2288	1	179	1	179	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119507975	119505867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119505900_119508000
ES.1202.27	chr1	-	2728	17	FSM	ENSMUSG00000026383.15	ENSMUST00000191046.7	6870	17	53	4089	-11	243	multi-exon	FALSE	canonical	2	7	junction_1	22.0620573609988	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTCCTGCTTAACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	119576677	119522560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119523790_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.28	chr1	-	2732	16	ISM	ENSMUSG00000026383.15	ENSMUST00000191046.7	6870	17	48	7035	-16	-2335	5prime_fragment	FALSE	canonical	3	78	junction_14	9.07597561330645	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCCTGTGTTATGCTG	NA	False	NA	NA	False	NA	NA	NA	119576682	119525506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.29	chr1	-	1587	15	NNC	ENSMUSG00000026383.15	novel	617	5	NA	NA	-12	-7860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.1826997628717	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGGTCATGTCTTA	NA	False	NA	NA	False	TTTAAA	-13	NA	119576678	119531031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119531275_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.6	chr1	-	6304	23	NIC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	20.6331595430092	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATGAGCTGTTTCTT	NA	False	NA	-6	True	AATAAA	-18	NA	119576679	119472761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.1202.8	chr1	-	6438	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.6578718698354	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTATGAGCTGTTTCT	NA	False	NA	-7	True	AATAAA	-17	NA	119576679	119472762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544222_119545102_119545168_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ES.12020.1	chr15	+	180	1	Intergenic	novelGene_10054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGTATTCATTC	NA	False	NA	NA	False	NA	NA	NA	70386520	70386700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_70386500_70386700
ES.12021.1	chr15	-	130	1	Intergenic	novelGene_10055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	70731562	70731432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_70731400_70731600
ES.12022.1	chr15	-	159	1	Intergenic	novelGene_10056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	70822036	70821877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_70821900_70822000
ES.12023.1	chr15	-	145	1	Intergenic	novelGene_10057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	71385546	71385401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_71385400_71385500
ES.12024.1	chr15	+	158	1	Intergenic	novelGene_10058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	71516299	71516457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_71516300_71516500
ES.12025.1	chr15	+	269	1	Intergenic	novelGene_10059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	71667326	71667595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_71667300_71667600
ES.12026.1	chr15	-	5148	63	NNC	ENSMUSG00000079022.11	novel	8809	64	NA	NA	27533	-2684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.47798622735174	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCTTGACTTACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	71878543	71670327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_71671370_71673725_71673804_71675962_71676146_71678063_71678131_71679744_71679925_71682896_71682942_71684675_71684712_71686382_71686455_71687793_71687848_71691879_71691934_71693778_71693833_71694484_71694530_71699539_71699594_71703918_71703973_71709176_71709231_71713122_71713177_71718018_71718073_71720387_71720442_71729099_71729154_71732808_71732923_71737480_71737529_71740809_71740855_71741959_71742014_71743653_71743690_71753454_71753533_71761365_71761411_71762336_71762442_71764034_71764089_71766662_71766717_71768582_71768637_71769411_71769466_71769720_71769775_71770954_71770988_71774665_71774708_71778376_71778431_71778866_71778930_71779448_71779494_71782889_71782944_71784567_71784622_71786954_71787009_71787632_71787687_71794741_71794796_71805257_71805312_71809138_71809193_71809435_71809466_71809847_71809893_71814930_71814976_71816234_71816289_71822497_71822543_71822975_71823030_71824167_71824222_71824371_71824426_71834521_71834561_71836455_71836519_71837593_71837639_71840883_71841001_71842129_71842211_71845488_71845765_71849090_71849215_71853688_71853801_71857372_71857437_71860482_71860558_71878470
ES.12026.2	chr15	-	3906	44	NNC	ENSMUSG00000079022.11	novel	8809	64	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGGCTTTAACTAGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	71906098	71740729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_71740855_71741959_71742014_71743653_71743690_71753454_71753533_71761365_71761411_71762336_71762442_71764034_71764089_71766662_71766717_71768582_71768637_71769411_71769466_71769720_71769775_71770954_71770988_71774665_71774708_71778376_71778431_71778866_71778930_71779448_71779494_71782889_71782944_71784567_71784622_71786954_71787009_71787632_71787687_71794741_71794796_71805257_71805312_71809138_71809193_71809435_71809466_71809847_71809893_71814930_71814976_71816234_71816289_71822497_71822543_71822975_71823030_71824167_71824222_71824371_71824426_71834521_71834561_71836455_71836519_71837593_71837639_71840883_71841001_71842129_71842211_71845488_71845765_71849090_71849215_71853688_71853801_71860482_71860558_71878470_71879038_71881231_71881384_71905342_71905472_71905681
ES.12026.4	chr15	-	3487	38	NNC	ENSMUSG00000079022.11	novel	8809	64	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.50577170564153	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCGAGAGGCTTTAACTA	NA	False	NA	NA	False	AATAAA	-14	NA	71906098	71740733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_71740855_71764002_71764089_71766662_71766717_71768582_71768637_71769411_71769466_71769720_71769775_71770954_71770988_71774665_71774708_71778376_71778431_71778866_71778930_71779448_71779494_71782889_71782944_71784567_71784622_71786954_71787009_71787632_71787687_71794741_71794796_71805257_71805312_71809138_71809193_71809435_71809466_71809847_71809893_71814930_71814976_71816234_71816289_71822497_71822543_71822975_71823030_71824167_71824222_71824371_71824426_71834521_71834561_71836455_71836519_71837593_71837639_71840883_71841001_71842129_71842211_71845488_71845765_71849090_71849215_71853688_71853801_71860482_71860558_71878470_71879038_71881231_71881384_71905681
ES.12026.5	chr15	-	3205	42	NIC	ENSMUSG00000079022.11	novel	8809	64	NA	NA	-21	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	1.50113976131016	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCGAGAGGCTTTAACTA	NA	False	NA	NA	False	AATAAA	-14	NA	71906097	71740733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_71740855_71741959_71742014_71743653_71743690_71753454_71753533_71761365_71761411_71762336_71762442_71764034_71764089_71766662_71766717_71768582_71768637_71769411_71769466_71769720_71769775_71770954_71770988_71774665_71774708_71778376_71778431_71778866_71778930_71779448_71779494_71782889_71782944_71784567_71784622_71786954_71787009_71787632_71787687_71794741_71794796_71805257_71805312_71809138_71809193_71809435_71809466_71809847_71809893_71814930_71814976_71816234_71816289_71822497_71822543_71822975_71823030_71824167_71824222_71824371_71824426_71834521_71834561_71836455_71836519_71837593_71837639_71840883_71841001_71842129_71842211_71845488_71845765_71849090_71849215_71853688_71853801_71860482_71860558_71881231_71881384_71905681
ES.12026.6	chr15	-	176	1	Intergenic	novelGene_10060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGACCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	71793444	71793268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_71793300_71793400
ES.12027.1	chr15	+	2249	1	Intergenic	novelGene_10061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCAAGAACAAATCAAAACA	3276	False	NA	NA	False	NA	NA	NA	72483546	72485795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72483500_72485800
ES.12028.1	chr15	+	4630	1	Intergenic	novelGene_10062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCCCTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	72523335	72527965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72523300_72528000
ES.12029.1	chr15	+	156	1	Intergenic	novelGene_10063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72725080	72725236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72725100_72725200
ES.1203.1	chr1	+	3693	27	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGCAGCATAGCAACCGAA	NA	False	NA	NA	False	NA	NA	NA	119587239	119765222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119587648_119595243_119595380_119603278_119603428_119606484_119606612_119607773_119607926_119610213_119610276_119610434_119610526_119612196_119612368_119615345_119615499_119619332_119619387_119619474_119619560_119620479_119620640_119633884_119634044_119635505_119635634_119643678_119643749_119649596_119649769_119653763_119653825_119669105_119669173_119671080_119671172_119692760_119692882_119693158_119693215_119693609_119693651_119700776_119700858_119700957_119701002_119711211_119711320_119730052_119730206_119764629
ES.1203.2	chr1	+	4571	17	Antisense	novelGene_ENSMUSG00000026384.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTATGTAACTAAGAGATAA	NA	False	NA	NA	False	AAAACA	-33	NA	119587241	119656057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_119587648_119595243_119595380_119603278_119603428_119606484_119606612_119607773_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615499_119619332_119619387_119619474_119619560_119620479_119620640_119633884_119634044_119635505_119635634_119643678_119643749_119649596_119649769_119653763
ES.1203.3	chr1	+	266	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAAGAAACATCTG	NA	False	NA	NA	False	NA	NA	NA	119613593	119613859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119613600_119613900
ES.1203.4	chr1	+	178	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTCAGCAATCTG	NA	False	NA	NA	False	NA	NA	NA	119643273	119643451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119643300_119643500
ES.1203.5	chr1	+	167	1	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTATTTATTTCATT	NA	False	NA	NA	False	NA	NA	NA	119699522	119699689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119699500_119699700
ES.1203.6	chr1	+	176	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACTTTAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	119700182	119700358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119700200_119700400
ES.1203.7	chr1	+	157	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	119738261	119738418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119738300_119738400
ES.1203.8	chr1	+	6536	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGGTTAGAGATTT	NA	False	NA	NA	False	NA	NA	NA	119749314	119755850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_119749300_119755800
ES.12030.1	chr15	+	148	1	Intergenic	novelGene_10064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72742328	72742476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72742300_72742500
ES.12031.1	chr15	+	3624	1	Intergenic	novelGene_10065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTTGGCTTAGCATGTT	NA	False	NA	NA	False	NA	NA	NA	72757762	72761386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72757800_72761400
ES.12032.1	chr15	+	187	1	Intergenic	novelGene_10066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	72870551	72870738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72870600_72870700
ES.12033.1	chr15	-	4124	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9692446667405	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72933129	72461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.10	chr15	-	3802	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.8156923520293	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTTGATTTCAGAC	NA	False	NA	-2	True	AATAAA	-20	NA	72932898	72461469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462546_72462635_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.15	chr15	-	4075	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.2323361735693	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGTGTTGATTTCAG	NA	False	NA	-4	True	AATAAA	-18	NA	72932894	72461471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72642025_72642215_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.16	chr15	-	3889	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.2870973053424	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGTGTTGATTTCAG	NA	False	NA	-4	True	AATAAA	-18	NA	72932891	72461471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72739493_72739625_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.18	chr15	-	3798	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	55.2372793029616	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACACTGTGTTGATTT	NA	False	NA	-7	True	AATAAA	-15	NA	72932894	72461474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565439_72608668_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.2	chr15	-	3443	22	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.3349489551209	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932894	72461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808814_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72929956_72932843
ES.12033.20	chr15	-	3156	19	ISM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	149	103769	-5	-103769	5prime_fragment	FALSE	canonical	3	111	junction_8	15.1483405765193	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCTTCAAATGGCATG	NA	False	NA	NA	False	GGGGCT	-25	NA	72932904	72565237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.21	chr15	-	4512	17	NIC	ENSMUSG00000047921.18	novel	4529	18	NA	NA	1	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.9188586820595	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACAGTGGTTATGTT	NA	False	NA	NA	False	AATACA	-29	NA	72932893	72671361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_72673252_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.22	chr15	-	4474	1	FSM	ENSMUSG00000106847.2	ENSMUST00000202826.2	4725	1	251	0	251	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGGAAAGTTCTTTG	NA	False	NA	2	True	AATAAA	-27	NA	72681922	72677448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72677400_72681900
ES.12033.23	chr15	-	2744	18	NNC	ENSMUSG00000047921.18	novel	2639	13	NA	NA	1	16146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.2395334792673	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTTTTTATTTGAG	NA	False	NA	NA	False	NA	NA	NA	72932893	72707871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72707967_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.24	chr15	-	2841	17	NNC	ENSMUSG00000047921.18	novel	2639	13	NA	NA	1	-10438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.9188586820595	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATCTGCTCTCTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	72932893	72734455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72734675_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.25	chr15	-	3528	14	ISM	ENSMUSG00000047921.18	ENSMUST00000230270.2	2968	17	1	83609	1	5629	5prime_fragment	FALSE	canonical	3	111	junction_3	16.7324932798716	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGACTGTTTTTACTT	NA	False	NA	NA	False	AATAAA	-13	NA	72932893	72807626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.26	chr15	-	3043	1	Intergenic	novelGene_10067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	72901534	72898491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_72898500_72901500
ES.12033.27	chr15	-	176	1	Intergenic	novelGene_10068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAGAAAA	7990	False	NA	NA	False	NA	NA	NA	72917727	72917551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_72917600_72917700
ES.12033.3	chr15	-	3720	4	NNC	ENSMUSG00000047921.18	novel	3301	22	NA	NA	367761	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.9671956592216	197	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72559898	72461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72468840_72469027_72557131
ES.12033.4	chr15	-	4154	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.4420075881827	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72933132	72461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.5	chr15	-	3783	23	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55.4050636167866	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932904	72461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462546_72557131_72557222_72565351_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12033.7	chr15	-	3796	21	NNC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.4741594867514	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTTGATTTCAGAC	NA	False	NA	-2	True	AATAAA	-20	NA	72932913	72461469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72462012_72462464_72462689_72557131_72557222_72565351_72565507_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ES.12034.1	chr15	+	178	1	Intergenic	novelGene_10069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	72949433	72949611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_72949400_72949600
ES.12035.1	chr15	-	1976	1	Intergenic	novelGene_10070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTCTTCTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72962185	72960209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_72960200_72962200
ES.12036.1	chr15	+	3129	2	NIC	ENSMUSG00000068391.9	novel	871	3	NA	NA	5	14	intron_retention	FALSE	canonical	3	479	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTTTTAGGTTCTTTG	NA	False	NA	21	True	ATTAAA	-32	NA	72962245	72965938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_72964809_72965372
ES.12036.2	chr15	+	881	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	9	-19	9	19	multi-exon	FALSE	canonical	3	479	junction_2	8	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGTTCTTTGTGAAA	NA	False	NA	26	True	ATTAAA	-37	NA	72962249	72965943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_72962433_72964681_72964809_72965372
ES.12036.3	chr15	+	1415	2	FSM	ENSMUSG00000068391.9	ENSMUST00000137698.2	2114	2	0	699	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTTCATTGAAGTGG	NA	False	NA	7	True	ATTAAA	-18	NA	72962260	72965924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_72962433_72964681
ES.12036.5	chr15	+	1566	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	21	-716	1	17	multi-exon	FALSE	canonical	3	479	junction_2	8	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTAGTCTTGCTGTCTA	NA	False	NA	NA	False	TATAAA	-20	NA	72962261	72966640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_72962433_72964681_72964809_72965372
ES.12036.6	chr15	+	809	3	NNC	ENSMUSG00000068391.9	novel	871	3	NA	NA	469	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	239	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGCTTCATTGAAGTG	NA	False	NA	6	True	ATTAAA	-17	NA	72962729	72965923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_72962861_72964681_72964809_72965372
ES.12037.1	chr15	-	3518	1	Antisense	novelGene_ENSMUSG00000068391.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72966821	72963303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_72963300_72966800
ES.12038.1	chr15	-	14208	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-405	-3	-405	3	multi-exon	TRUE	canonical	3	61	junction_13	10.6510302057803	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGTGTCCAGTTACTCA	4039	False	NA	-21	True	AATAAA	-38	NA	73057189	72967689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.10	chr15	-	4312	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-374	9862	-374	1627	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTCAGTGTGCAGTTA	4070	False	NA	NA	False	NA	NA	NA	73057158	72977554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.11	chr15	-	4052	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-458	10206	-458	1283	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGGTAGGTAGATGC	3986	False	NA	-2	True	AATATA	-19	NA	73057242	72977898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.13	chr15	-	5115	17	NIC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	32	1282	intron_retention	FALSE	canonical	3	72	junction_15	9.16664299239367	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTGGTAGGTAGATG	4476	False	NA	-3	True	AATATA	-18	NA	73056752	72977899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.17	chr15	-	3442	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	10	10348	10	1141	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCCTGTAGGACT	4454	False	NA	-96	True	AATATA	-17	NA	73056774	72978040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.18	chr15	-	3012	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	7	10781	7	708	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTAAAACCAGTCTATG	4451	False	NA	NA	False	AAAACA	-15	NA	73056777	72978473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.19	chr15	-	3238	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-374	10936	-374	553	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCGTTTTCCAGAATG	4070	False	NA	NA	False	NA	NA	NA	73057158	72978628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.2	chr15	-	13448	17	NIC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	20	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	23.6734786998024	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGCTGCCTATTCCG	4464	False	NA	34	True	AATAAA	-20	NA	73056764	72967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73056609
ES.12038.20	chr15	-	8412	2	NNC	ENSMUSG00000036698.12	novel	617	5	NA	NA	16	-47902	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	4460	False	NA	NA	False	NA	NA	NA	73056768	73048172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73052487_73052670
ES.12038.3	chr15	-	5532	1	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	83326	234	12445	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGTTGTTGTTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	72973458	72967926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_72967900_72973500
ES.12038.4	chr15	-	11215	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-2	2587	-2	-2587	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGTGAGTTTCAACTGC	4442	False	NA	NA	False	NA	NA	NA	73056786	72970279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.5	chr15	-	11083	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	-31	2748	-31	-2748	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGGCTTCATGTCATT	4413	False	NA	0	True	TATAAA	-24	NA	73056815	72970440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.6	chr15	-	2857	2	NNC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	9582	-2750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGAGGCTTCATGTCA	NA	False	NA	-2	True	TATAAA	-22	NA	72976321	72970442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72970777_72973798
ES.12038.7	chr15	-	10980	19	NIC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	-29	-2753	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	22.5449482447404	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATTCTGAGGCTTCATG	6154	False	NA	-5	True	TATAAA	-19	NA	73049725	72970445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73049617
ES.12038.8	chr15	-	8013	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	16	5771	16	5718	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTGTGAGTGCCAT	4460	False	NA	NA	False	AATAAA	-34	NA	73056768	72973463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12038.9	chr15	-	7089	19	NNC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	16	4793	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	22.3711675109385	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTCATTTGAAGTGATT	4460	False	NA	NA	False	NA	NA	NA	73056768	72974388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997011_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ES.12039.1	chr15	+	228	1	Intergenic	novelGene_10071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATATATATCTCT	NA	False	NA	NA	False	NA	NA	NA	73057993	73058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73058000_73058200
ES.1204.1	chr1	-	10797	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	77	0	77	0	multi-exon	TRUE	canonical	3	29	junction_24	12.095832819514	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCGTTTCAAGGTTCT	NA	False	NA	0	True	AATAAA	-21	NA	119765266	119580196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.10	chr1	-	3668	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	163	7043	-103	-1466	multi-exon	FALSE	canonical	3	29	junction_24	12.095832819514	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGTACCTTGAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	119765180	119587239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.11	chr1	-	3620	28	NNC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	121	-1760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	19.8444568868942	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATTTTGTTATGTTC	NA	False	NA	NA	False	AATAAA	-31	NA	119765222	119587533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700877_119700958_119701002_119711211_119711320_119730052_119730208_119730571_119730757_119764631
ES.1204.12	chr1	-	3422	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	109	7343	109	-1766	multi-exon	FALSE	canonical	3	29	junction_24	12.095832819514	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGAAACTGATTTTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	119765234	119587539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.13	chr1	-	3213	25	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	-76	-1772	combination_of_known_junctions	FALSE	canonical	1	2	junction_22	15.3756210353345	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTACTGGGAAACTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	119765153	119587545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119711211_119711320_119730052_119730208_119764631
ES.1204.14	chr1	-	2633	24	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	77	-1773	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	19.0938385136972	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTACTGGGAAACTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119764652	119587546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119700778_119700877_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.15	chr1	-	3274	27	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	2	-1774	combination_of_known_junctions	FALSE	canonical	1	1	junction_23	15.4919811286336	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGTACTGGGAAACTG	NA	False	NA	NA	False	AATAAA	-17	NA	119765075	119587547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700877_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.16	chr1	-	198	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAACTTAGAGTAT	NA	False	NA	NA	False	NA	NA	NA	119592662	119592464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_119592500_119592700
ES.1204.17	chr1	-	3472	26	NNC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	-80	-9176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.1887326660258	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAACAGCCACGTTCGT	NA	False	NA	NA	False	NA	NA	NA	119765157	119594949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633943_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.18	chr1	-	1078	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTATATTTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	119601699	119600621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_119600600_119601700
ES.1204.19	chr1	-	2425	20	ISM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	134	32150	-132	5184	5prime_fragment	FALSE	canonical	3	29	junction_17	10.1849924900395	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAACTAGAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	119765209	119612346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.2	chr1	-	10662	26	NNC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	128	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.3047971854375	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	-3	True	AATAAA	-18	NA	119765215	119580199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669201_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119730052_119730208_119764631
ES.1204.20	chr1	-	132	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGAAATTGATTG	8143	False	NA	NA	False	AATAAA	-9	NA	119629301	119629169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_119629200_119629300
ES.1204.21	chr1	-	6679	10	ISM	ENSMUSG00000026384.14	ENSMUST00000163435.8	2365	19	70159	11928	16314	4295	internal_fragment	FALSE	canonical	3	37	junction_2	6.82768510921654	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	119694918	119629458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607
ES.1204.3	chr1	-	10810	27	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	80	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_23	15.4919811286336	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	-3	True	AATAAA	-18	NA	119765263	119580199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700877_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.4	chr1	-	10679	26	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	84	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	15.3479119100938	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	-3	True	AATAAA	-18	NA	119765259	119580199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119730052_119730208_119764631
ES.1204.5	chr1	-	10514	24	NIC	ENSMUSG00000026384.14	novel	10874	27	NA	NA	-128	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_19	16.2450515949704	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTTCGTTTCAAGGT	NA	False	NA	-3	True	AATAAA	-18	NA	119765205	119580199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.6	chr1	-	5816	1	ISM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	178792	539	28816	-539	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTTTTCATTTCTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	119586551	119580735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_119580700_119586600
ES.1204.8	chr1	-	5128	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	172	5574	-94	3	multi-exon	FALSE	canonical	3	29	junction_24	12.095832819514	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCCCCCTATTCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119765171	119585770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.1204.9	chr1	-	4447	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	190	6237	-76	-660	multi-exon	FALSE	canonical	3	29	junction_24	12.095832819514	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTATAGTGACAGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	119765153	119586433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ES.12040.1	chr15	+	177	1	Intergenic	novelGene_10072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	73070410	73070587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73070400_73070600
ES.12041.1	chr15	+	182	1	Intergenic	novelGene_10074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	73144986	73145168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73145000_73145200
ES.12042.1	chr15	+	3662	1	Antisense	novelGene_ENSMUSG00000022607.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAGTGAGAAAAAAGAAAA	3151	False	NA	NA	False	NA	NA	NA	73153010	73156672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_73153000_73156700
ES.12043.1	chr15	+	5432	1	Intergenic	novelGene_10075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCACAAAAACACCAGACC	444	False	NA	NA	False	AATGAA	-30	NA	73183110	73188542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73183100_73188500
ES.12044.1	chr15	+	1355	1	Intergenic	novelGene_10077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	73218881	73220236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73218900_73220200
ES.12045.1	chr15	+	159	1	Intergenic	novelGene_10078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	73257749	73257908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73257700_73257900
ES.12046.1	chr15	+	1402	1	Intergenic	novelGene_10079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGAGAAGCACTTTGT	NA	False	NA	NA	False	NA	NA	NA	73258121	73259523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73258100_73259500
ES.12046.2	chr15	+	171	1	Intergenic	novelGene_10080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCTGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73258220	73258391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73258200_73258400
ES.12047.1	chr15	+	176	2	Antisense	novelGene_ENSMUSG00000115602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	363	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAATCCTC	NA	False	NA	NA	False	NA	NA	NA	73275014	73282487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_73275065_73282361
ES.12048.1	chr15	+	210	1	Intergenic	novelGene_10082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAATGTTTTTCCTGTT	NA	False	NA	NA	False	AAGAAA	-15	NA	73284306	73284516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73284300_73284500
ES.12049.1	chr15	+	746	1	FSM	ENSMUSG00000115810.2	ENSMUST00000226643.2	799	1	52	1	52	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGCCATATTTTAGT	NA	False	NA	NA	False	AATAAA	-17	NA	73295211	73295957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_73295200_73296000
ES.1205.1	chr1	-	3329	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	12	0	12	0	multi-exon	FALSE	canonical	3	113	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGCCTTAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119840926	119835619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119838885_119840862
ES.1205.2	chr1	-	1510	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	21	1810	21	-1810	multi-exon	FALSE	canonical	3	113	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAGTGGACTGTGGAA	NA	False	NA	0	True	AATAAA	-28	NA	119840917	119837429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119838885_119840862
ES.1205.3	chr1	-	1657	2	NNC	ENSMUSG00000036975.6	novel	3341	2	NA	NA	41	-1822	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTCTCTGAATTCCAG	NA	False	NA	-12	True	AATAAA	-16	NA	119840897	119837441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_119838885_119840683
ES.1205.4	chr1	-	1346	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	40	1955	40	-1955	multi-exon	FALSE	canonical	3	113	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCTATATGAATCT	NA	False	NA	NA	False	AATAGA	-13	NA	119840898	119837574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119838885_119840862
ES.12050.1	chr15	-	4541	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	49.759882419852	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGCCTTTTTTTTTTT	1678	False	NA	-1	True	ATTAAA	-21	NA	73295039	73076947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.101	chr15	-	3949	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	6	-231	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	47.5888525695765	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1758	False	NA	-10	True	ATTAAA	-18	NA	73294959	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.102	chr15	-	4135	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.2882187599336	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1678	False	NA	-11	True	ATTAAA	-17	NA	73295039	73077182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73100082_73100131_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
ES.12050.103	chr15	-	4962	35	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.0286578975135	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1740	False	NA	-11	True	ATTAAA	-17	NA	73294977	73077182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294402
ES.12050.104	chr15	-	4424	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	1	-232	combination_of_known_splicesites	FALSE	canonical	2	3	junction_34	71.5721621474695	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1589	False	NA	-11	True	ATTAAA	-17	NA	73295128	73077182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73295087
ES.12050.105	chr15	-	4328	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-502	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	57.6671398929885	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1086	False	NA	-11	True	ATTAAA	-17	NA	73295631	73077182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73295087_73295376_73295593
ES.12050.107	chr15	-	4289	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	57.6671398929885	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACTGGAGCTAACTGA	1657	False	NA	-11	True	ATTAAA	-17	NA	73295060	73077182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73293496_73293581_73294857
ES.12050.109	chr15	-	4630	31	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-233	intron_retention	FALSE	canonical	3	91	junction_29	30.2224346397764	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1740	False	NA	-12	True	ATTAAA	-16	NA	73294977	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.11	chr15	-	4603	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_31	58.6938329288105	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1717	False	NA	-4	True	AATAAA	-44	NA	73295000	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.110	chr15	-	4046	31	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-233	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	58.6926173665252	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1681	False	NA	-12	True	ATTAAA	-16	NA	73295036	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.111	chr15	-	4715	35	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	4	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.5593980178386	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1681	False	NA	-12	True	ATTAAA	-16	NA	73295036	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73263607_73263730_73264192_73264297_73266496_73266594_73294864
ES.12050.116	chr15	-	3923	30	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.1926083075897	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1678	False	NA	-12	True	ATTAAA	-16	NA	73295039	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73214981_73215209_73294857
ES.12050.117	chr15	-	4188	32	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-233	combination_of_known_splicesites	FALSE	canonical	1	1	junction_27	59.0564026068788	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1740	False	NA	-12	True	ATTAAA	-16	NA	73294977	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.12	chr15	-	4410	33	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	52.5636518898754	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGCATTGCCTTTTTT	1786	False	NA	-6	True	AATAAA	-42	NA	73294931	73076952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73264192_73264297_73266496_73266594_73294857
ES.12050.120	chr15	-	4176	33	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	22	-233	combination_of_known_junctions	FALSE	canonical	2	3	junction_32	58.0422714358897	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1610	False	NA	-12	True	ATTAAA	-16	NA	73295107	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73295087
ES.12050.121	chr15	-	4111	32	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-233	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	52.162237907087	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1678	False	NA	-12	True	ATTAAA	-16	NA	73295039	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73236889_73237045_73266496_73266594_73294857
ES.12050.123	chr15	-	3840	31	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-1	-233	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	68.6321029515748	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1751	False	NA	-12	True	ATTAAA	-16	NA	73294966	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73128955_73136160_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167230_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.124	chr15	-	4545	34	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-1	-233	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	59.9072438825652	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCACTGGAGCTAACTG	1783	False	NA	-12	True	ATTAAA	-16	NA	73294934	73077183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73266496_73266594_73294857
ES.12050.127	chr15	-	4204	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-11	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.2691740121845	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTGGAGCTAACT	1729	False	NA	-13	True	ATTAAA	-15	NA	73294988	73077184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73100082_73100131_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.129	chr15	-	4496	35	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	1	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.5376833933751	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTGGAGCTAACT	1678	False	NA	-13	True	ATTAAA	-15	NA	73295039	73077184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73293496_73293581_73294857
ES.12050.13	chr15	-	4689	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	57.2755330401397	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	1679	False	NA	-7	True	AATAAA	-41	NA	73295038	73076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.130	chr15	-	4167	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-13	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.5260013010705	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTGGAGCTAACT	1643	False	NA	-13	True	ATTAAA	-15	NA	73295074	73077184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73293496_73293581_73294857
ES.12050.131	chr15	-	4253	34	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	19	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.4408480142201	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTGGAGCTAACT	1607	False	NA	-13	True	ATTAAA	-15	NA	73295110	73077184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73295087
ES.12050.132	chr15	-	3534	29	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	3	-235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.4854650898381	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCACTGGAGCTAAC	1680	False	NA	-14	True	ATTAAA	-14	NA	73295037	73077185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73128955_73136160_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294857
ES.12050.133	chr15	-	4238	4	ISM	ENSMUSG00000022607.19	ENSMUST00000239146.2	4540	35	204136	235	-2815	-235	intron_retention	FALSE	canonical	3	178	junction_3	20.4993224820291	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCACTGGAGCTAAC	6025	False	NA	-14	True	ATTAAA	-14	NA	73090904	73077185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827
ES.12050.136	chr15	-	4090	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	322	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGAAAACTTCTGCCC	1700	False	NA	NA	False	CATAAA	-27	NA	73295017	73077409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.137	chr15	-	4035	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-3	122	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	64.3649843554138	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTTCCTAGAAGTG	1781	False	NA	NA	False	AATATA	-18	NA	73294936	73077609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.138	chr15	-	3435	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-11	122	combination_of_known_junctions	FALSE	canonical	0	0	junction_29	43.4102394474954	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTTCCTAGAAGTG	1773	False	NA	NA	False	AATATA	-18	NA	73294944	73077609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294857
ES.12050.139	chr15	-	3488	30	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-39	122	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.3443602712423	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTTCCTAGAAGTG	1922	False	NA	NA	False	AATATA	-18	NA	73266587	73077609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496
ES.12050.14	chr15	-	4479	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.5429608948399	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	1759	False	NA	-7	True	AATAAA	-41	NA	73294958	73076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.140	chr15	-	3832	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	10	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.3162093541538	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTTCCTAGAAGTG	1762	False	NA	NA	False	AATATA	-18	NA	73294955	73077609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.141	chr15	-	3859	34	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	16	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.3681278236574	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTTCCTAGAAGTG	1806	False	NA	NA	False	AATATA	-18	NA	73294911	73077609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.143	chr15	-	3391	31	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	121	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	63.2622759277245	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTTCCTAGAAGT	1740	False	NA	NA	False	AATATA	-17	NA	73294977	73077610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73294857
ES.12050.144	chr15	-	3641	31	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.9103349619331	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTTCCTAGAAGT	1700	False	NA	NA	False	AATATA	-17	NA	73295017	73077610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
ES.12050.145	chr15	-	3756	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	1	660	1	121	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTTCCTAGAAGT	1678	False	NA	NA	False	AATATA	-17	NA	73295039	73077610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.146	chr15	-	3979	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	18	121	combination_of_known_splicesites	FALSE	canonical	2	3	junction_34	71.5721621474695	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTTCCTAGAAGT	1606	False	NA	NA	False	AATATA	-17	NA	73295111	73077610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73295087
ES.12050.147	chr15	-	3957	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-31	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3747323334334	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTGTGTTCCTAGAAG	1625	False	NA	NA	False	AATATA	-16	NA	73295092	73077611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082596_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.148	chr15	-	3825	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-11	119	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	49.759882419852	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATGTGTGTTCCTAGAA	1729	False	NA	NA	False	AATATA	-15	NA	73294988	73077612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.15	chr15	-	4277	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	1717	False	NA	-7	True	AATAAA	-41	NA	73295000	73076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
ES.12050.150	chr15	-	3705	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	30	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.1274314713455	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGATGTGTGTTCCTAGA	1707	False	NA	NA	False	AATATA	-14	NA	73295010	73077613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082609_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.151	chr15	-	3689	33	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	12	115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.7686247303484	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGGATGTGTGTTCCT	1764	False	NA	NA	False	AATATA	-11	NA	73294953	73077616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.152	chr15	-	3832	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-36	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.8912166808465	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGGTGTTCAAATTGG	1925	False	NA	NA	False	AATGAA	-28	NA	73266584	73077629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73143643_73143771_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496
ES.12050.153	chr15	-	3718	34	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.3681278236574	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTCACGGCTCCAACTG	1752	False	NA	NA	False	NA	NA	NA	73294965	73077804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.154	chr15	-	3532	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	30	855	30	-74	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCTCACGGCTCCAACT	1707	False	NA	NA	False	NA	NA	NA	73295010	73077805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.155	chr15	-	199	1	Genic_Genomic	ENSMUSG00000022607.19	novel	NA	NA	NA	NA	1654	14	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAACATGAAGA	NA	False	NA	NA	False	NA	NA	NA	73086435	73086236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_73086200_73086400
ES.12050.156	chr15	-	1450	1	Intergenic	novelGene_10073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6811	False	NA	NA	False	TATAAA	-12	NA	73096069	73094619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73094600_73096100
ES.12050.157	chr15	-	5025	1	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	38617	4850	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACATAGAATTTAGCTA	8777	False	NA	NA	False	NA	NA	NA	73176559	73171534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73171500_73176600
ES.12050.158	chr15	-	4633	7	NIC	ENSMUSG00000022607.19	novel	1333	10	NA	NA	19	3348	intron_retention	FALSE	canonical	2	3	junction_6	77.3787582106499	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTCAAAGAAAAA	1607	False	NA	NA	False	NA	NA	NA	73295110	73188735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73295087
ES.12050.159	chr15	-	202	1	Intergenic	novelGene_10076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGTTGATATTAATG	NA	False	NA	NA	False	NA	NA	NA	73204159	73203957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73204000_73204200
ES.12050.16	chr15	-	4490	33	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	34	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	54.0647398379942	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	1622	False	NA	-7	True	AATAAA	-41	NA	73295095	73076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.160	chr15	-	4667	2	FSM	ENSMUSG00000022607.19	ENSMUST00000227435.2	4580	2	-62	-25	4	25	multi-exon	FALSE	canonical	3	183	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGTGCCTTGAAGAG	1681	False	NA	NA	False	NA	NA	NA	73295036	73262105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73266594_73294857
ES.12050.161	chr15	-	1893	3	ISM	ENSMUSG00000022607.19	ENSMUST00000226848.2	364	4	-102	46972	11	25	5prime_fragment	FALSE	canonical	3	25	junction_1	79	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGTGCCTTGAAGAG	1688	False	NA	NA	False	NA	NA	NA	73295029	73262105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_73263730_73266496_73266594_73294857
ES.12050.162	chr15	-	221	1	Intergenic	novelGene_10081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTTTAGTCAGGAAAAT	8403	False	NA	NA	False	NA	NA	NA	73276363	73276142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73276100_73276400
ES.12050.18	chr15	-	4530	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	56.9744665946949	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	1663	False	NA	-7	True	AATAAA	-41	NA	73295054	73076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73113964_73114067_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.19	chr15	-	4381	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.7914719035603	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTGCATTGCCTTTT	1678	False	NA	-8	True	AATAAA	-40	NA	73295039	73076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078116_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146376_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.2	chr15	-	4828	34	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_31	60.9290032278835	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1700	False	NA	-4	True	AATAAA	-44	NA	73295017	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73263607_73263730_73266496_73266594_73294857
ES.12050.20	chr15	-	4770	34	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	59.9072438825652	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTGCATTGCCTTTT	1787	False	NA	-8	True	AATAAA	-40	NA	73294930	73076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73266496_73266594_73294857
ES.12050.22	chr15	-	4300	30	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	63.3079971016881	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTGCATTGCCTTTT	1681	False	NA	-8	True	AATAAA	-40	NA	73295036	73076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.23	chr15	-	4545	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-4	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTGCATTGCCTTTT	1700	False	NA	-8	True	AATAAA	-40	NA	73295017	73076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.24	chr15	-	4065	30	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	43.981700875371	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGTTGCATTGCCTTT	1700	False	NA	-9	True	AATAAA	-39	NA	73295017	73076955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73294857
ES.12050.25	chr15	-	4610	31	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.6346673203138	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGTTGCATTGCCTTT	1711	False	NA	-9	True	AATAAA	-39	NA	73295006	73076955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294402
ES.12050.27	chr15	-	4416	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.1267028193829	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGTTGCATTGCCTTT	1706	False	NA	-9	True	AATAAA	-39	NA	73295011	73076955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163970_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.29	chr15	-	3330	24	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	39438	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	61.5674281106397	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGTTGCATTGCCTTT	9598	False	NA	-9	True	AATAAA	-39	NA	73175738	73076955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73123944_73123972_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668
ES.12050.3	chr15	-	4437	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.9541587944639	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1661	False	NA	-4	True	AATAAA	-44	NA	73295056	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.30	chr15	-	4241	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_28	47.5981325497358	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGTTGCATTGCCTTT	1681	False	NA	-9	True	AATAAA	-39	NA	73295036	73076955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73214981_73215209_73266496_73266594_73294857
ES.12050.32	chr15	-	4705	36	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-1	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.4670549900735	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACTGACCTTCATTGCG	1751	False	NA	0	True	ATTAAA	-28	NA	73294966	73077171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73114883_73115082_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.33	chr15	-	4390	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-15	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.3162093541538	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACTGACCTTCATTGC	1641	False	NA	-1	True	ATTAAA	-27	NA	73295076	73077172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.34	chr15	-	4139	33	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	19	-222	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	62.5503547152212	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACTGACCTTCATTGC	1607	False	NA	-1	True	ATTAAA	-27	NA	73295110	73077172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73264192_73264297_73266496_73266594_73295087
ES.12050.35	chr15	-	3876	30	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	13	-223	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	44.1229230950247	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAACTGACCTTCATTG	1601	False	NA	-2	True	ATTAAA	-26	NA	73295116	73077173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73266496_73266594_73294857
ES.12050.37	chr15	-	4482	35	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-19	-226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.1262390331905	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCTAACTGACCTTCA	1637	False	NA	-5	True	ATTAAA	-23	NA	73295080	73077176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.38	chr15	-	4635	35	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-9	-226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.4810709562896	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGCTAACTGACCTTCA	1775	False	NA	-5	True	ATTAAA	-23	NA	73294942	73077176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.4	chr15	-	5002	35	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_31	67.2282946281989	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1681	False	NA	-4	True	AATAAA	-44	NA	73295036	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.40	chr15	-	4085	32	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-3	-227	combination_of_known_splicesites	FALSE	canonical	2	2	junction_28	61.3130348410123	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGCTAACTGACCTTC	1737	False	NA	-6	True	ATTAAA	-22	NA	73294980	73077177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.41	chr15	-	4163	33	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	8	-227	combination_of_known_junctions	FALSE	canonical	2	3	junction_32	60.2863528166823	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGCTAACTGACCTTC	1596	False	NA	-6	True	ATTAAA	-22	NA	73295121	73077177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73295087
ES.12050.44	chr15	-	4298	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	18	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.5509776835808	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGCTAACTGACCTTC	1695	False	NA	-6	True	ATTAAA	-22	NA	73295022	73077177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
ES.12050.46	chr15	-	4261	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	-72	228	17	-228	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCTAACTGACCTT	1605	False	NA	-7	True	ATTAAA	-21	NA	73295112	73077178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.47	chr15	-	4428	35	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-23	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	68.0844237276432	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCTAACTGACCTT	1717	False	NA	-7	True	ATTAAA	-21	NA	73295000	73077178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73222554_73222608_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.48	chr15	-	4538	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	17	-228	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	57.2755330401397	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCTAACTGACCTT	1605	False	NA	-7	True	ATTAAA	-21	NA	73295112	73077178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.49	chr15	-	4487	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	7	-229	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	64.3649843554138	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGAGCTAACTGACCT	1759	False	NA	-8	True	ATTAAA	-20	NA	73294958	73077179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.50	chr15	-	4213	33	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.7686247303484	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGAGCTAACTGACCT	1677	False	NA	-8	True	ATTAAA	-20	NA	73295040	73077179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.51	chr15	-	4063	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	30	-229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.0391383966907	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGAGCTAACTGACCT	1820	False	NA	-8	True	ATTAAA	-20	NA	73294897	73077179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146448_73148701_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.53	chr15	-	4199	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-14	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	70.4318960009479	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1770	False	NA	-9	True	ATTAAA	-19	NA	73294947	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73293496_73293581_73294857
ES.12050.54	chr15	-	4004	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	7	-230	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	47.4842664000988	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1759	False	NA	-9	True	ATTAAA	-19	NA	73294958	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.57	chr15	-	4892	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	30	-230	intron_retention	FALSE	canonical	3	16	junction_30	59.5996736043915	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1707	False	NA	-9	True	ATTAAA	-19	NA	73295010	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.58	chr15	-	3673	29	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	44.724896048293	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1700	False	NA	-9	True	ATTAAA	-19	NA	73295017	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73294857
ES.12050.59	chr15	-	4484	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	1	-230	combination_of_known_splicesites	FALSE	canonical	3	10	junction_32	69.6575719907042	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1678	False	NA	-9	True	ATTAAA	-19	NA	73295039	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.6	chr15	-	4160	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_29	43.4102394474954	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1707	False	NA	-4	True	AATAAA	-44	NA	73295010	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294857
ES.12050.60	chr15	-	4851	36	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	29	-230	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	72.5089157079518	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1706	False	NA	-9	True	ATTAAA	-19	NA	73295011	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.61	chr15	-	4485	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	17	-230	combination_of_known_junctions	FALSE	canonical	3	16	junction_31	58.6938329288105	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1605	False	NA	-9	True	ATTAAA	-19	NA	73295112	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.62	chr15	-	3849	30	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-11	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.6590740201576	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1729	False	NA	-9	True	ATTAAA	-19	NA	73294988	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294857
ES.12050.63	chr15	-	4230	32	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-16996	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.3479238145349	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	NA	False	NA	-9	True	ATTAAA	-19	NA	73232172	73077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874
ES.12050.64	chr15	-	4022	32	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	22	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.5676977699127	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1699	False	NA	-10	True	ATTAAA	-18	NA	73295018	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73214981_73215209_73266496_73266594_73294857
ES.12050.65	chr15	-	3689	2	FSM	ENSMUSG00000022607.19	ENSMUST00000226454.2	542	2	-2597	-550	-2597	-231	multi-exon	FALSE	canonical	3	228	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	NA	False	NA	-10	True	ATTAAA	-18	NA	73083937	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73078110_73081176
ES.12050.66	chr15	-	3880	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-29	-231	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	53.9664916612357	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1711	False	NA	-10	True	ATTAAA	-18	NA	73295006	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73263607_73263730_73266496_73266594_73294857
ES.12050.67	chr15	-	4286	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-231	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	52.5636518898754	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1681	False	NA	-10	True	ATTAAA	-18	NA	73295036	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73264192_73264297_73266496_73266594_73294857
ES.12050.68	chr15	-	4851	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-13	-231	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_33	70.7200276728565	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1643	False	NA	-10	True	ATTAAA	-18	NA	73295074	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294402
ES.12050.69	chr15	-	5430	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	22	-231	intron_retention	TRUE	canonical	0	0	junction_3	78.640244696577	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1610	False	NA	-10	True	ATTAAA	-18	NA	73295107	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73083845_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167230_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73266496_73266594_73295087
ES.12050.7	chr15	-	4721	35	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	64.3649843554138	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1754	False	NA	-4	True	AATAAA	-44	NA	73294963	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.70	chr15	-	7632	5	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-2736	-231	intron_retention	FALSE	non_canonical	0	0	junction_3	107.241258385008	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	6104	False	NA	-10	True	ATTAAA	-18	NA	73090825	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73086235_73086437_73089167_73090575
ES.12050.72	chr15	-	4433	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	22	-231	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	60.5163975712368	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1610	False	NA	-10	True	ATTAAA	-18	NA	73295107	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73294857
ES.12050.73	chr15	-	4406	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-19	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.8708910314544	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1637	False	NA	-10	True	ATTAAA	-18	NA	73295080	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.74	chr15	-	4727	35	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	-15	-231	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	67.2282946281989	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1725	False	NA	-10	True	ATTAAA	-18	NA	73294992	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.76	chr15	-	4131	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-21	-231	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1635	False	NA	-10	True	ATTAAA	-18	NA	73295082	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
ES.12050.77	chr15	-	4061	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.6928123573266	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1700	False	NA	-10	True	ATTAAA	-18	NA	73295017	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73274615_73274737_73294857
ES.12050.78	chr15	-	4034	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	14	-231	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	47.4828624055271	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1766	False	NA	-10	True	ATTAAA	-18	NA	73294951	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.79	chr15	-	3760	30	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-231	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	48.1557125542259	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1681	False	NA	-10	True	ATTAAA	-18	NA	73295036	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73128955_73136160_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.8	chr15	-	4708	35	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	72.4976136106476	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1790	False	NA	-4	True	AATAAA	-44	NA	73294927	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73143643_73143771_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.81	chr15	-	3543	27	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	18	-231	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	46.2497881012258	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1695	False	NA	-10	True	ATTAAA	-18	NA	73295022	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73266496_73266594_73294857
ES.12050.82	chr15	-	4199	32	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	4	-231	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	58.9812400729342	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1756	False	NA	-10	True	ATTAAA	-18	NA	73294961	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
ES.12050.83	chr15	-	4992	34	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-2	-231	intron_retention	FALSE	canonical	0	0	junction_6	77.1845605157005	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1750	False	NA	-10	True	ATTAAA	-18	NA	73294967	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101637_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
ES.12050.84	chr15	-	4408	35	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	-25	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	76.1324424206089	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1715	False	NA	-10	True	ATTAAA	-18	NA	73295002	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73293496_73293581_73294857
ES.12050.85	chr15	-	4266	33	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-21	-231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	60.583587659943	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1635	False	NA	-10	True	ATTAAA	-18	NA	73295082	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266609_73294956
ES.12050.86	chr15	-	4184	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-231	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	66.2931389620185	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1700	False	NA	-10	True	ATTAAA	-18	NA	73295017	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
ES.12050.87	chr15	-	4297	33	NNC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	386	-231	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_32	58.1452585663698	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	2176	False	NA	-10	True	ATTAAA	-18	NA	73294541	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294402
ES.12050.88	chr15	-	4094	33	NNC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	7	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	76.2922974384538	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1684	False	NA	-10	True	ATTAAA	-18	NA	73295033	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148701_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175742_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73263607_73263730_73266496_73266594_73294857
ES.12050.9	chr15	-	4324	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	47.4828624055271	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1707	False	NA	-4	True	AATAAA	-44	NA	73295010	73076950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12050.91	chr15	-	4219	32	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	29	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.4046077436424	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1706	False	NA	-10	True	ATTAAA	-18	NA	73295011	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73294857
ES.12050.93	chr15	-	3936	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	23	-231	combination_of_known_junctions	FALSE	canonical	0	0	junction_29	43.4102394474954	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1700	False	NA	-10	True	ATTAAA	-18	NA	73295017	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73266496_73266594_73294857
ES.12050.95	chr15	-	4024	31	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	23	-231	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	71.2674228210587	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1700	False	NA	-10	True	ATTAAA	-18	NA	73295017	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
ES.12050.97	chr15	-	3808	30	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	-21782	-231	combination_of_known_splicesites	FALSE	canonical	2	2	junction_28	53.0730992542087	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	6063	False	NA	-10	True	ATTAAA	-18	NA	73236958	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73214981_73215209_73236889
ES.12050.99	chr15	-	4032	31	NNC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	2	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.4204977727009	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1754	False	NA	-10	True	ATTAAA	-18	NA	73294963	73077181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73078110_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192619_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ES.12051.1	chr15	+	176	1	Intergenic	novelGene_10083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACATTAG	NA	False	NA	NA	False	NA	NA	NA	73310622	73310798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73310600_73310800
ES.12052.1	chr15	-	179	1	Intergenic	novelGene_10084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73313541	73313362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73313400_73313500
ES.12053.1	chr15	-	179	1	Intergenic	novelGene_10085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAAAGATGCA	NA	False	NA	NA	False	NA	NA	NA	73316521	73316342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73316300_73316500
ES.12054.1	chr15	-	263	1	Intergenic	novelGene_10086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCCAACAGCATTACTT	NA	False	NA	NA	False	NA	NA	NA	73322864	73322601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73322600_73322900
ES.12055.1	chr15	-	196	1	Intergenic	novelGene_10087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGCTAAAACTACAGTA	NA	False	NA	NA	False	NA	NA	NA	73326586	73326390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73326400_73326600
ES.12056.1	chr15	-	172	1	Intergenic	novelGene_10088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	73335725	73335553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73335600_73335700
ES.12057.1	chr15	+	177	1	Intergenic	novelGene_10089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTGGAGAGGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	73380173	73380350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73380200_73380400
ES.12058.1	chr15	+	5297	23	FSM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	11	-9	11	9	multi-exon	FALSE	canonical	2	4	junction_14	7.34678205825995	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATGGATAGCGGGGTC	NA	False	NA	NA	False	AATAAA	-41	NA	73384419	73444100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ES.12058.10	chr15	+	2336	7	ISM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	49680	20	-2622	-20	3prime_fragment	FALSE	canonical	2	4	junction_4	4	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGCTGGTTGCTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	73434088	73444071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ES.12058.11	chr15	+	2215	6	ISM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	51882	3	-420	-3	3prime_fragment	FALSE	canonical	2	4	junction_3	4.35430821141545	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGCTGCTATGAATG	NA	False	NA	NA	False	AATAAA	-29	NA	73436290	73444088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ES.12058.12	chr15	+	2013	5	NNC	ENSMUSG00000036661.15	novel	5299	23	NA	NA	533	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.05702071979286	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGCTGGTTGCTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	73439459	73444071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73439634_73439834_73439963_73440270_73440375_73440456_73440595_73442602
ES.12058.2	chr15	+	5188	24	NNC	ENSMUSG00000036661.15	novel	5172	24	NA	NA	21	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.69798539918394	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGCTGGTTGCTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	73384429	73444071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419130_73419199_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ES.12058.3	chr15	+	3193	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-88	23707	24	-9320	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATGAAAGCAAATATCCC	NA	False	NA	NA	False	NA	NA	NA	73384432	73420241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
ES.12058.4	chr15	+	5316	24	NNC	ENSMUSG00000036661.15	novel	5172	24	NA	NA	30	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.36908524880117	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGCTGGTTGCTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	73384438	73444071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416799_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73428917_73428990_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ES.12058.5	chr15	+	3116	7	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-67	36725	45	11829	5prime_fragment	FALSE	canonical	3	9	junction_4	7.08872343937891	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCCGGCTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	73384453	73407223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109
ES.12058.7	chr15	+	2669	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-14	24157	-14	-9770	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAACTATGTTGTATA	NA	False	NA	NA	False	NA	NA	NA	73384506	73419791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
ES.12058.8	chr15	+	5779	5	NNC	ENSMUSG00000036661.15	novel	5299	23	NA	NA	32	5916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10.6858551365813	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73384552	73401310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73399208_73399288
ES.12058.9	chr15	+	2426	9	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	45012	-142	48	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	4.80722113075735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTGCTATGAATGGA	6229	False	NA	NA	False	AATAAA	-31	NA	73429532	73444090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73439834_73439963_73440270_73440375_73440456_73440595_73442602
ES.12059.1	chr15	-	178	1	Intergenic	novelGene_10090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATTAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	73392282	73392104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73392100_73392300
ES.1206.1	chr1	+	1259	10	NNC	ENSMUSG00000026387.16	novel	2012	14	NA	NA	35662	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTAGCCTGTGTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	119970425	119991260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_119970489_119971180_119971279_119972360_119972494_119974388_119974543_119981403_119981465_119982001_119982072_119983114_119983207_119984123_119984251_119989623_119989666_119990841
ES.12060.1	chr15	-	7953	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	11	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	100.412618119194	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGTCTTGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	73517600	73449267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73516742
ES.12060.11	chr15	-	5239	11	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	140.63289088972	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517523	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73505683_73506149_73508704_73508852_73509462_73509685_73517342
ES.12060.12	chr15	-	4540	9	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	123.431597960166	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517597	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73516742_73516804_73517342
ES.12060.13	chr15	-	4677	9	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	125.347267620798	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517573	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73509462_73509685_73517342
ES.12060.14	chr15	-	4409	8	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	-16677	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.455166899917	471	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73534288	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73534103
ES.12060.15	chr15	-	4403	8	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.901513076828	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517590	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453911_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.16	chr15	-	6170	7	NIC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	201	junction_6	40.5462698654266	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517627	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73461424_73477290_73477926_73517342
ES.12060.17	chr15	-	3697	7	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	108.730170605955	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517593	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461310_73517371
ES.12060.18	chr15	-	8760	5	NIC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	60	0	intron_retention	FALSE	canonical	3	201	junction_4	46.6978318554513	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517551	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73456399_73457136_73457237_73457867_73461424_73477290_73477926_73517342
ES.12060.19	chr15	-	6755	6	NIC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	30	0	intron_retention	FALSE	canonical	3	201	junction_5	44.0254471868259	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517581	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73458935_73459393_73461424_73477290_73477926_73517342
ES.12060.2	chr15	-	7315	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	46	2	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGTGTGGTCTTGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	73517565	73449270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.20	chr15	-	4309	8	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.428169013286	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGCTGTGTTTATGT	NA	False	NA	-5	True	AATAAA	-25	NA	73517640	73452140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461413_73477490_73477926_73517342
ES.12060.21	chr15	-	7091	9	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	-24	1	intron_retention	FALSE	canonical	0	0	junction_8	138.91701659624	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACGCTGTGTTTATGT	NA	False	NA	-5	True	AATAAA	-25	NA	73517635	73452140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73508704_73508852_73509462_73509685_73517342
ES.12060.22	chr15	-	6514	6	NIC	ENSMUSG00000079020.10	novel	4664	8	NA	NA	3	0	intron_retention	FALSE	canonical	1	3	junction_3	117.008717623945	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517608	73452141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73456399_73457136_73457237_73457867_73458935_73461234_73461424_73477290_73477926_73517342
ES.12060.23	chr15	-	4588	9	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	124.710101335056	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517562	73452141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73508704_73508852_73517342
ES.12060.24	chr15	-	4800	10	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	135.16172297668	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73517552	73452141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73508704_73508852_73509462_73509685_73517342
ES.12060.25	chr15	-	13073	8	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	101.433601484932	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAACGCTGTGTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	73517558	73452143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73508704
ES.12060.26	chr15	-	3877	8	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	91	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.428169013286	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAACGCTGTGTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	73517520	73452143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477810_73477926_73517342
ES.12060.27	chr15	-	4309	9	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	96.9012867561623	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAACGCTGTGTTTA	NA	False	NA	-8	True	AATAAA	-22	NA	73517591	73452143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477347_73477505_73477926_73517342
ES.12060.28	chr15	-	4306	8	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	-16702	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.455166899917	471	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGGAACGCTGTGTTT	NA	False	NA	-9	True	AATAAA	-21	NA	73534313	73452144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73534225
ES.12060.29	chr15	-	4943	7	NIC	ENSMUSG00000079020.10	novel	4664	8	NA	NA	3	-3	intron_retention	FALSE	canonical	3	201	junction_6	38.2640678560041	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGGAACGCTGTGTTT	NA	False	NA	-9	True	AATAAA	-21	NA	73517608	73452144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.3	chr15	-	7125	6	NIC	ENSMUSG00000079020.10	novel	4664	8	NA	NA	38	4	intron_retention	FALSE	canonical	3	201	junction_5	41.7822929002227	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTTTATGTCCTTGG	NA	False	NA	1	True	AATAAA	-31	NA	73517573	73452134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73456399_73457136_73457237_73457867_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.30	chr15	-	4290	7	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	109.395942439481	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTCAAAGGAACGCT	NA	False	NA	-15	True	AATAAA	-15	NA	73517600	73452150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73461234_73461424_73477290_73477926_73517342
ES.12060.31	chr15	-	6399	7	NNC	ENSMUSG00000079020.10	novel	4664	8	NA	NA	23	-9	intron_retention	FALSE	canonical	0	0	junction_4	110.444053207445	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTCAAAGGAACGCT	NA	False	NA	-15	True	AATAAA	-15	NA	73517588	73452150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73459574_73459752_73461424_73477290_73477926_73517342
ES.12060.32	chr15	-	5293	9	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	28	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	125.134365283882	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTCAAAGGAACGCT	NA	False	NA	-15	True	AATAAA	-15	NA	73517583	73452150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73516041_73516282_73516742
ES.12060.33	chr15	-	3208	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	23	5	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAATTTCAGCTGTCT	NA	False	NA	NA	False	ATTAAA	-35	NA	73517588	73453400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.34	chr15	-	4126	7	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	46	-1261	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	40.2864741569674	403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTGTGGCCCAGCATG	NA	False	NA	NA	False	NA	NA	NA	73517565	73454666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.35	chr15	-	429	3	Intergenic	novelGene_10091	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGCTGTCAATTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	73534237	73525672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73525815_73525928_73526082_73534103
ES.12060.36	chr15	-	169	1	Intergenic	novelGene_10092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTACATCTAAGC	NA	False	NA	NA	False	NA	NA	NA	73527331	73527162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73527200_73527300
ES.12060.4	chr15	-	4524	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	-27	4	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTTTATGTCCTTGG	NA	False	NA	1	True	AATAAA	-31	NA	73517638	73452134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.5	chr15	-	6682	7	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	20	2	intron_retention	FALSE	canonical	3	201	junction_6	40.2864741569674	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGTGTTTATGTCCTT	NA	False	NA	-1	True	AATAAA	-29	NA	73517591	73452136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
ES.12060.6	chr15	-	4516	8	NNC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	101.774059483119	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGTGTTTATGTCCTT	NA	False	NA	-1	True	AATAAA	-29	NA	73517611	73452136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477947_73517342
ES.12060.7	chr15	-	3833	7	NIC	ENSMUSG00000079020.10	novel	2457	7	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	108.730170605955	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGTGTTTATGTCCTT	NA	False	NA	-1	True	AATAAA	-29	NA	73517584	73452136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73517342
ES.12060.8	chr15	-	6585	6	NIC	ENSMUSG00000079020.10	novel	4664	8	NA	NA	29	1	intron_retention	FALSE	canonical	3	201	junction_5	41.9141980717752	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTGTGTTTATGTCCT	NA	False	NA	-2	True	AATAAA	-28	NA	73517582	73452137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73461424_73477290_73477926_73517342
ES.12060.9	chr15	-	4899	9	NNC	ENSMUSG00000079020.10	novel	4240	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	124.4957328586	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73517552	73452138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73505683_73506149_73517342
ES.12061.1	chr15	+	630	4	Antisense	novelGene_ENSMUSG00000045281.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	8.60232526704263	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTCAGGGTCCTCCTTC	NA	False	NA	NA	False	AATAAA	-43	NA	73547120	73570071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_73547205_73547439_73547681_73549310_73549460_73569915
ES.12061.10	chr15	+	3432	5	NIC	ENSMUSG00000059895.14	novel	1680	6	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	26	junction_1	38.6288428509061	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGTGAAGAGTGT	NA	False	NA	17	True	AATAAA	-11	NA	73596619	73629073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_73596698_73622977_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.11	chr15	+	4876	4	NIC	ENSMUSG00000059895.14	novel	1680	6	NA	NA	-24	0	intron_retention	FALSE	canonical	3	26	junction_1	40.2768199119819	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73596622	73629075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_73596698_73622977_73627274_73627876_73627952_73628645
ES.12061.12	chr15	+	1399	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	10	271	10	-270	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAACGGCTATGTGCGT	NA	False	NA	NA	False	NA	NA	NA	73596656	73628805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.13	chr15	+	1764	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	-43	1539	-43	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	False	NA	20	True	AATAAA	-14	NA	73620179	73629076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.14	chr15	+	4893	4	NIC	ENSMUSG00000059895.14	novel	3260	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	41	junction_1	33.2498955721	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTGAAGAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	73620221	73629074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_73620315_73622977_73627274_73627876_73627952_73628645
ES.12061.15	chr15	+	3164	5	NIC	ENSMUSG00000059895.14	novel	3260	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	41	junction_1	29.0774826970974	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGTGAAGAGTGT	NA	False	NA	17	True	AATAAA	-11	NA	73620221	73629073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_73620315_73622977_73623877_73625604_73627274_73627876_73627952_73628645
ES.12061.16	chr15	+	2038	2	ISM	ENSMUSG00000059895.14	ENSMUST00000229339.2	6459	4	6560	0	6212	0	intron_retention	FALSE	canonical	3	116	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73626434	73629075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_73627274_73627876
ES.12061.2	chr15	+	1506	5	Intergenic	novelGene_10093	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	3.39116499156263	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	73547128	73560339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73547205_73549310_73549460_73551082_73551193_73559121_73559871_73559917
ES.12061.3	chr15	+	2179	9	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47864	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	48.5173937882075	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGAAGAGTGTTATAG	NA	False	NA	22	True	AATAAA	-16	NA	73547129	73629078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73547205_73547439_73547681_73549310_73549460_73569915_73569999_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.4	chr15	+	1478	5	Intergenic	novelGene_10094	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	3.39116499156263	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	73547149	73560339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73547205_73549310_73549460_73551082_73551193_73559121_73559861_73559914
ES.12061.5	chr15	+	3854	8	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47814	0	intron_retention	FALSE	canonical	2	5	junction_1	49.9305640313606	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73547179	73629075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73547205_73547439_73547681_73549310_73549460_73569915_73569999_73622977_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.6	chr15	+	1903	7	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47440	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.9491450638052	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTGAAGAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	73547553	73629074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73547681_73549310_73549460_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.7	chr15	+	3420	8	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-47381	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.7032181082287	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGAGTGTTATAGAGC	NA	False	NA	25	True	AATAAA	-19	NA	73547612	73629081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73547681_73549310_73549460_73569915_73569999_73622977_73625363_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12061.8	chr15	+	1705	6	NNC	ENSMUSG00000059895.14	novel	6459	4	NA	NA	-42915	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4617620360571	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGTGTGAAGAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	73552078	73629074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_73552146_73622977_73623877_73625604_73625698_73627142_73627285_73627876_73627952_73628645
ES.12061.9	chr15	+	1706	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	-27	1	-27	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73596619	73629075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ES.12062.1	chr15	-	2057	2	FSM	ENSMUSG00000045281.6	ENSMUST00000064166.5	2144	2	85	2	85	-2	multi-exon	FALSE	canonical	2	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGGGCCAACAGCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	73579269	73566454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73568412_73579169
ES.12063.1	chr15	-	158	1	Intergenic	novelGene_10095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73586233	73586075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_73586100_73586200
ES.12064.1	chr15	+	1397	4	Intergenic	novelGene_10096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTATGTTGGTTTCTTTT	8059	False	NA	NA	False	AGTAAA	-15	NA	73737216	73782858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73737361_73776166_73776326_73779836_73779949_73781876
ES.12064.2	chr15	+	3315	7	Intergenic	novelGene_10097	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.897527467855751	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTTTTGTTTCCTTCT	8258	False	NA	NA	False	AGTAAA	-16	NA	73737415	73785943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_73737721_73776166_73776326_73777432_73777544_73779530_73779949_73780239_73780390_73780661_73780729_73783838
ES.12065.1	chr15	-	1311	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-131	-532	-131	532	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGGCTGAGAAAAAAAAAGA	NA	False	NA	NA	False	AATACA	-42	NA	73966313	73965002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73965000_73966300
ES.12065.2	chr15	-	868	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-128	-92	-128	92	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTGTAAGATTTGTT	NA	False	NA	NA	False	AAGAAA	-14	NA	73966310	73965442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_73965400_73966300
ES.12066.1	chr15	+	4232	24	NIC	ENSMUSG00000034730.18	novel	6228	31	NA	NA	-41	1951	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.25651883670852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCTGGTCTCTTCTTTG	NA	False	NA	NA	False	AATACA	-14	NA	74388245	74447919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74388716_74400778_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412675_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687
ES.12066.10	chr15	+	2253	10	NIC	ENSMUSG00000034730.18	novel	2744	15	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.82768510921654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74435648	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74435731_74435808_74435951_74441717_74441822_74452413_74452586_74454740_74454837_74456226_74456282_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.11	chr15	+	2702	15	FSM	ENSMUSG00000034730.18	ENSMUST00000185682.7	2744	15	21	21	21	0	multi-exon	FALSE	canonical	1	1	junction_1	5.72899891529302	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74435661	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74435731_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74452413_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.12	chr15	+	3136	7	ISM	ENSMUSG00000034730.18	ENSMUST00000186095.2	2391	13	8384	22	5196	0	3prime_fragment	FALSE	canonical	1	1	junction_3	7.08872343937891	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74451187	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.13	chr15	+	1332	1	NIC	ENSMUSG00000034730.18	novel	6228	31	NA	NA	188	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74459960	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74460000_74461300
ES.12066.2	chr15	+	5671	32	NNC	ENSMUSG00000034730.18	novel	2158	10	NA	NA	11484	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.91446081254533	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTAGTCTTTTTTTT	NA	False	NA	4	True	AATAAA	-16	NA	74400163	74461313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74400183_74400778_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412666_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420123_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74449243_74449343_74452413_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.3	chr15	+	3973	24	NNC	ENSMUSG00000034730.18	novel	718	6	NA	NA	11496	1960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.34471905511598	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCTTTGCTCTGTGCC	NA	False	NA	NA	False	AATACA	-23	NA	74400175	74447928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74400378_74400778_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412675_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687
ES.12066.4	chr15	+	5499	29	NIC	ENSMUSG00000034730.18	novel	6228	31	NA	NA	-11635	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	4.65547735337152	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74400610	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412675_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74452413_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.5	chr15	+	3679	23	ISM	ENSMUSG00000034730.18	ENSMUST00000042035.16	6228	31	12826	13395	-11376	1950	internal_fragment	FALSE	non_canonical	0	0	junction_5	3.22855288310541	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGCTGGTCTCTTCTTT	NA	False	NA	NA	False	AATACA	-13	NA	74400869	74447918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412666_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687
ES.12066.6	chr15	+	5110	30	NIC	ENSMUSG00000034730.18	novel	6228	31	NA	NA	-11031	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.53602307652561	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGTAGTCTTTTTTT	NA	False	NA	3	True	AATAAA	-15	NA	74401214	74461312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74401790_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412675_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74452413_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.7	chr15	+	4731	31	NNC	ENSMUSG00000034730.18	novel	2158	10	NA	NA	-10225	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.59818804893116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTAGTCTTTTTTTTT	NA	False	NA	5	True	AATAAA	-17	NA	74402020	74461314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74402107_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412666_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74449243_74449343_74452413_74452586_74454740_74454837_74456226_74456267_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.8	chr15	+	4707	31	NNC	ENSMUSG00000034730.18	novel	2158	10	NA	NA	-10213	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.69526948700025	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGTAGTCTTTTTTT	NA	False	NA	3	True	AATAAA	-15	NA	74402032	74461312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74402107_74410146_74410309_74411051_74411163_74411555_74411721_74412244_74412410_74412666_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435833_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74449243_74449343_74452413_74452586_74454740_74454837_74456226_74456282_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12066.9	chr15	+	4910	28	NIC	ENSMUSG00000034730.18	novel	5621	31	NA	NA	-1736	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	4.33760473243181	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATTAAAAACC	NA	False	NA	-17	True	NA	NA	NA	74410509	74461292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74411163_74411555_74411721_74412244_74412410_74412675_74412841_74413378_74413544_74413637_74413740_74415104_74415212_74415356_74415552_74416125_74416195_74416793_74416903_74419468_74419613_74420120_74420197_74420380_74420484_74421862_74421907_74435808_74435951_74441717_74441822_74443261_74443365_74443923_74444075_74444655_74444726_74445950_74446018_74447687_74447774_74452413_74452586_74454740_74454837_74456226_74456282_74458605_74459307_74459955_74459992_74460152_74460261_74460535
ES.12067.1	chr15	-	5732	4	Antisense	novelGene_ENSMUSG00000034730.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTGAGTGTTGATA	NA	False	NA	NA	False	GATAAA	-16	NA	74401927	74165667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_74170635_74199540_74199599_74209972_74210100_74401347
ES.12067.2	chr15	-	5446	5	NNC	ENSMUSG00000118581.2	novel	795	5	NA	NA	-47216	106933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.433012701892219	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTATGTGAGTGTTG	NA	False	NA	NA	False	GATAAA	-13	NA	74359509	74165670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74170635_74209972_74210100_74312098_74312294_74352922_74353016_74359442
ES.12067.3	chr15	-	1728	6	NNC	ENSMUSG00000118581.2	novel	795	5	NA	NA	-47005	3141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGCCCGGTGGGTGGT	NA	False	NA	NA	False	AGTAAA	-17	NA	74359298	74269462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74270633_74272586_74272654_74284945_74285063_74295905_74296025_74352820_74353016_74359238
ES.12067.4	chr15	-	2649	1	Antisense	novelGene_ENSMUSG00000034730.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCAGTCTGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	74401926	74399277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_74399300_74401900
ES.12068.1	chr15	-	4139	30	NNC	ENSMUSG00000022603.10	novel	3583	27	NA	NA	-16479	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.18853020273201	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACGTGTGCCAGGCCCG	5391	False	NA	NA	False	ATTAAA	-27	NA	74524681	74477879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74478061_74478249_74478325_74478517_74478621_74479959_74480083_74481486_74481647_74482061_74482239_74482745_74482890_74483092_74483205_74483374_74483513_74483719_74483905_74485072_74485218_74486758_74486909_74487939_74488035_74488111_74488248_74492949_74493055_74496533_74496630_74497270_74497407_74497958_74498036_74498126_74498250_74498737_74498885_74499459_74499580_74499801_74499919_74500123_74500217_74501202_74501352_74503402_74503534_74503670_74503833_74506490_74506753_74507366_74507457_74523563_74523699_74524409
ES.12068.2	chr15	-	4973	30	NNC	ENSMUSG00000022603.10	novel	3583	27	NA	NA	-16431	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.03333269405322	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGCCTCTCACCAGA	5439	False	NA	NA	False	ATTAAA	-12	NA	74524633	74477894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74478061_74478249_74478325_74478517_74478621_74479959_74480083_74481490_74481647_74482061_74482239_74482745_74482890_74483092_74483205_74483374_74483513_74483719_74483905_74485072_74485218_74486151_74486307_74486758_74486909_74487939_74488035_74488111_74488248_74492949_74493055_74496533_74496630_74497270_74497407_74497958_74498036_74498126_74498250_74498702_74498885_74499459_74499580_74499801_74499919_74500123_74500217_74501202_74501352_74503402_74503534_74503670_74503833_74506490_74506753_74507366_74507457_74523563
ES.12068.3	chr15	-	2647	16	NNC	ENSMUSG00000022603.10	novel	561	4	NA	NA	-16424	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.25786415094088	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACATTCTGTAGTTTGG	5446	False	NA	NA	False	AATAAA	-18	NA	74524626	74490949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74491569_74492949_74493055_74496533_74496630_74497270_74497407_74497958_74498036_74498126_74498250_74498707_74498885_74499459_74499580_74499801_74499919_74500123_74500217_74501202_74501352_74503402_74503534_74506490_74506753_74507366_74507457_74523563_74523699_74524409
ES.12068.4	chr15	-	1709	2	Intergenic	novelGene_10098	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCACTCCTTACCCCAG	5528	False	NA	NA	False	AATAAA	-18	NA	74524544	74517633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_74518362_74523563
ES.12069.1	chr15	-	3242	2	NIC	ENSMUSG00000022602.15	novel	3055	3	NA	NA	-1	0	intron_retention	FALSE	canonical	3	30	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544418	74540931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_74542169_74542413
ES.12069.3	chr15	-	3056	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	-2	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_2	11.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGTATGTGCCATTTC	NA	False	NA	-1	True	AATAAA	-13	NA	74544419	74540932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74541843_74542028_74542169_74542413
ES.12069.4	chr15	-	1465	4	NNC	ENSMUSG00000022602.15	novel	3055	3	NA	NA	1476	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.6999743983464	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGTATGTGCCATTTC	NA	False	NA	-1	True	AATAAA	-13	NA	74542941	74540932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74541843_74542028_74542169_74542413_74542696_74542808
ES.1207.1	chr1	-	932	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	245	134	245	-134	multi-exon	FALSE	canonical	3	40	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCTTCCTACGGTGT	NA	False	NA	NA	False	ATTAAA	-31	NA	120001559	119995240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_119996055_120001441
ES.12070.1	chr15	+	990	3	FSM	ENSMUSG00000022598.7	ENSMUST00000023265.5	860	3	-133	3	-133	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAGAACCTGTGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	74586554	74588915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74586756_74587869_74587978_74588234
ES.12071.1	chr15	-	5603	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	235	15	235	-15	multi-exon	FALSE	canonical	3	23	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCTCATTCCTATGTTC	NA	False	NA	NA	False	AGTAAA	-26	NA	74581149	74574164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74579714_74581095
ES.12071.2	chr15	-	3383	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	212	2258	212	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	2	True	NA	NA	NA	74581172	74576407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74579714_74581095
ES.12071.3	chr15	-	3475	2	NNC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	-6885	-2260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGTCATGATTCTT	NA	False	NA	0	True	NA	NA	NA	74588269	74576409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74579714_74588098
ES.12071.4	chr15	-	3422	1	NIC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	1553	-2260	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGTCATGATTCTT	NA	False	NA	0	True	NA	NA	NA	74579831	74576409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_74576400_74579800
ES.12071.5	chr15	-	3781	2	NNC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	317	-2263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTTTGTCATGATT	NA	False	NA	-3	True	NA	NA	NA	74581067	74576412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74579714_74580587
ES.12071.6	chr15	-	1110	1	NIC	ENSMUSG00000046380.4	novel	5853	2	NA	NA	237	-5888	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGGTCTGGGGTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	74581147	74580037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_74580000_74581100
ES.12072.1	chr15	+	1565	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	11	208	11	-208	multi-exon	FALSE	canonical	3	79	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCCTGGATGTGTCTTC	4651	False	NA	71	True	NA	NA	NA	74593063	74596280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74593657_74595308
ES.12072.2	chr15	+	828	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	13	943	13	-943	multi-exon	FALSE	canonical	3	79	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCCCTGTGCTTGCCT	4653	False	NA	NA	False	NA	NA	NA	74593065	74595545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74593657_74595308
ES.12072.3	chr15	+	1764	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	15	5	15	-5	multi-exon	FALSE	canonical	3	79	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACGTGCACCTGGCCT	4655	False	NA	NA	False	NA	NA	NA	74593067	74596483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74593657_74595308
ES.12073.1	chr15	-	4005	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	14	4	-8	-4	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTTTCTCTCAT	9954	False	NA	-8	True	AATAAA	-14	NA	74624881	74619704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
ES.12074.1	chr15	-	638	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	153	0	153	0	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGTTTGACTTCTG	929	False	NA	-2	True	ATTAAA	-18	NA	74671682	74668722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
ES.12075.1	chr15	-	3323	3	NNC	ENSMUSG00000063522.6	novel	3211	3	NA	NA	-54207	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATAGTCTCATTTTGTC	9760	False	NA	NA	False	AATAAA	-4	NA	74823077	74748847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_74751882_74752523_74752623_74822887
ES.12076.1	chr15	+	4100	2	NIC	ENSMUSG00000022587.15	novel	1211	3	NA	NA	-210	0	intron_retention	FALSE	canonical	3	650	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	7575	False	NA	27	True	AATAAA	-15	NA	74826689	74831180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_74829727_74830117
ES.12076.11	chr15	+	1017	5	NNC	ENSMUSG00000022587.15	novel	2068	5	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	239.702419679068	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTATGTCCTGGTTG	8395	False	NA	26	True	AATAAA	-14	NA	74827509	74831179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341_74830976_74831074
ES.12076.12	chr15	+	1899	3	ISM	ENSMUSG00000022587.15	ENSMUST00000188042.2	714	4	383	-505	383	0	3prime_fragment	FALSE	canonical	3	491	junction_2	79.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	9672	False	NA	27	True	AATAAA	-15	NA	74828786	74831180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74829727_74830117_74830238_74830341
ES.12076.3	chr15	+	1460	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	-331	-7	62	7	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGGTTGTCCTTAAC	8056	False	NA	34	True	AATAAA	-22	NA	74827170	74831187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
ES.12076.4	chr15	+	743	4	NNC	ENSMUSG00000022587.15	novel	2281	4	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_3	242.10511950161	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8351	False	NA	27	True	AATAAA	-15	NA	74827465	74831180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_74827567_74829625_74829727_74830117_74830238_74830759
ES.12076.5	chr15	+	1262	3	ISM	ENSMUSG00000022587.15	ENSMUST00000191127.7	575	5	360	-671	-33	0	intron_retention	FALSE	canonical	3	397	junction_1	126.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8354	False	NA	27	True	AATAAA	-15	NA	74827468	74831180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74827567_74829625_74829727_74830117
ES.12076.6	chr15	+	1203	5	ISM	ENSMUSG00000022587.15	ENSMUST00000185863.7	617	6	383	-738	-29	0	3prime_fragment	FALSE	canonical	2	2	junction_1	280.309092788657	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8358	False	NA	27	True	AATAAA	-15	NA	74827472	74831180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74827567_74829263_74829313_74829625_74829727_74830117_74830238_74830341
ES.12076.8	chr15	+	3685	1	FSM	ENSMUSG00000022587.15	ENSMUST00000191439.2	815	1	-34	-2836	-4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTATGTCCTGGTTGTCC	8383	False	NA	29	True	AATAAA	-17	NA	74827497	74831182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_74827500_74831200
ES.12076.9	chr15	+	1805	3	ISM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	578	2	-4	0	intron_retention	FALSE	canonical	3	397	junction_1	126.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCCCTTAGACTTT	8383	False	NA	NA	False	NA	NA	NA	74827497	74831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_74827567_74829625_74829727_74830117
ES.12077.1	chr15	-	871	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	84	0	-19	0	multi-exon	FALSE	canonical	3	72	junction_1	7.54247233265651	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	9592	False	NA	-4	True	AATAAA	-15	NA	74869796	74866726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
ES.12078.1	chr15	-	7057	1	Genic_Genomic	ENSMUSG00000079018.11	novel	NA	NA	NA	NA	1477	3882	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACAGG	7732	False	NA	NA	False	NA	NA	NA	74919041	74911984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_74912000_74919000
ES.12078.2	chr15	-	823	4	FSM	ENSMUSG00000079018.11	ENSMUST00000065408.16	844	4	17	4	0	0	multi-exon	FALSE	canonical	3	16	junction_1	24.2257897474755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTCTGTTTTTCTTAT	9847	False	NA	NA	False	AATAAA	-19	NA	74920662	74916865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_74917460_74919201_74919319_74920290_74920374_74920633
ES.12079.1	chr15	-	4424	3	Intergenic	novelGene_10099	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTGTGTCATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	75088130	75073198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75074741_75085161_75085967_75086053
ES.1208.1	chr1	-	6851	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAAAGAGTCACTAGCC	NA	False	NA	NA	False	NA	NA	NA	120014523	120007672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120007700_120014500
ES.12080.1	chr15	+	7509	5	FSM	ENSMUSG00000047728.14	ENSMUST00000185307.7	758	5	-51	-6700	-51	5989	multi-exon	FALSE	canonical	0	0	junction_1	2.73861278752583	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTCTTGTTATCTC	1179	False	NA	NA	False	NA	NA	NA	75088173	75100499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75088262_75088532_75088604_75089563_75089681_75092469_75092690_75093486
ES.12080.2	chr15	+	2583	5	FSM	ENSMUSG00000047728.14	ENSMUST00000185307.7	758	5	-35	-1790	-35	1079	multi-exon	FALSE	canonical	0	0	junction_1	2.73861278752583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTAGAAGTCTTAGCC	1195	False	NA	NA	False	NA	NA	NA	75088189	75095589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75088262_75088532_75088604_75089563_75089681_75092469_75092690_75093486
ES.12080.3	chr15	+	2533	5	NIC	ENSMUSG00000047728.14	novel	758	5	NA	NA	-33	1081	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.48746859276655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAGAAGTCTTAGCCCA	1197	False	NA	NA	False	NA	NA	NA	75088191	75095591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75088262_75088532_75088604_75089563_75089681_75092469_75092640_75093486
ES.12080.4	chr15	+	6030	6	NNC	ENSMUSG00000047728.14	novel	758	5	NA	NA	-14	58567	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.68328157299975	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTCTGTCGTGAGTTC	1216	False	NA	NA	False	NA	NA	NA	75088210	75153077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75088262_75088532_75088604_75089563_75089681_75092469_75092640_75093486_75099064_75153033
ES.12080.5	chr15	+	7371	6	NNC	ENSMUSG00000047728.14	novel	1498	5	NA	NA	22	5987	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.68328157299975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATATGTGTCTTGTTATC	1254	False	NA	NA	False	NA	NA	NA	75088248	75100497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75088293_75088532_75088604_75089563_75089681_75092469_75092640_75093486_75095749_75095790
ES.12080.6	chr15	+	849	4	NNC	ENSMUSG00000022583.13	novel	818	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.74165738677394	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGATCTCAGTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	75140267	75144084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75140299_75140550_75140649_75141628_75141746_75143481
ES.12081.1	chr15	-	853	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-312	385	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5678778348646	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAAGTCTCTGTTTTTC	1040	False	NA	-6	True	AATAAA	-15	NA	75110929	75107060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75110882
ES.12081.2	chr15	-	841	4	NNC	ENSMUSG00000068348.5	novel	408	3	NA	NA	-418	385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.9221356098901	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAAGTCTCTGTTTTTC	934	False	NA	-6	True	AATAAA	-15	NA	75111035	75107060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75107668_75109440_75109558_75110548_75110631_75111000
ES.12082.1	chr15	+	199	1	Intergenic	novelGene_10100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAGGCTCCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	75419844	75420043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75419800_75420000
ES.12083.1	chr15	-	1503	4	NIC	ENSMUSG00000022577.18	novel	752	5	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGTCTGAGCCTGGGTG	NA	False	NA	-6	True	AATAAA	-20	NA	75439032	75436593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75437191_75437431_75437549_75437980_75438681_75438943
ES.12084.1	chr15	+	3585	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	-47	2	-47	-2	multi-exon	FALSE	canonical	3	54	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGCTCTGTTGGG	NA	False	NA	15	True	AGTAAA	-15	NA	75488480	75497147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75488670_75489892_75491541_75495399
ES.12084.10	chr15	+	4036	2	ISM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	19	3344	14	-1874	5prime_fragment	FALSE	canonical	3	54	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGATGTCTTCTCTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	75488546	75493805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_75488670_75489892
ES.12084.11	chr15	+	3496	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	False	NA	10	True	AGTAAA	-10	NA	75488546	75497142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488652_75489892_75491541_75495399
ES.12084.12	chr15	+	6400	2	NIC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCCCAGTCTCTCT	NA	False	NA	NA	False	AATAAA	-27	NA	75488546	75501676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75488670_75495399
ES.12084.13	chr15	+	1855	2	NIC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	-17	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	False	NA	10	True	AGTAAA	-10	NA	75488557	75497142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75488670_75495399
ES.12084.14	chr15	+	3958	3	NNC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCCCAGTCTCTCT	NA	False	NA	NA	False	AATAAA	-27	NA	75488557	75501676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488670_75489892_75490374_75498311
ES.12084.16	chr15	+	4169	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	12	True	AGTAAA	-12	NA	75488564	75497144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488670_75489892_75492212_75495399
ES.12084.18	chr15	+	8217	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	38	15	-4	-15	multi-exon	FALSE	canonical	2	8	junction_1	23	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAAAGTAAG	NA	False	NA	NA	False	AATAAA	-12	NA	75488570	75501661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75488878_75489892_75491541_75495399
ES.12084.19	chr15	+	2405	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTCGCTTCCTGTGCTCT	NA	False	NA	9	True	AGTAAA	-9	NA	75488578	75497141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488670_75489892_75490465_75495399
ES.12084.2	chr15	+	8115	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	-46	-4529	-46	2	multi-exon	FALSE	canonical	3	54	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCCCAGTCTCTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	75488481	75501678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75488670_75489892_75491541_75495399
ES.12084.20	chr15	+	3550	3	NNC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	False	NA	10	True	AGTAAA	-10	NA	75488602	75497142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488762_75489892_75491541_75495399
ES.12084.21	chr15	+	4011	3	NNC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTTCCTGTGCTCTGTTG	NA	False	NA	13	True	AGTAAA	-13	NA	75488630	75497145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75489248_75489892_75491541_75495399
ES.12084.22	chr15	+	6368	1	NIC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	2203	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTTCCTGTGCTCTGTTG	NA	False	NA	13	True	AGTAAA	-13	NA	75490777	75497145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75490800_75497100
ES.12084.3	chr15	+	2665	3	NNC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGCTTCCTGTGCTCTGT	NA	False	NA	11	True	AGTAAA	-11	NA	75488528	75497143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488878_75489892_75490465_75495399
ES.12084.4	chr15	+	5688	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	4	-2152	-1	2152	multi-exon	FALSE	canonical	3	54	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGGTCTGTGGTCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	75488531	75499301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75488670_75489892_75491541_75495399
ES.12084.5	chr15	+	4271	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	12	True	AGTAAA	-12	NA	75488535	75497144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488670_75489892_75492285_75495399
ES.12084.6	chr15	+	4744	2	NIC	ENSMUSG00000047003.16	novel	8270	3	NA	NA	7	-7	intron_retention	FALSE	canonical	3	54	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	False	NA	10	True	AGTAAA	-10	NA	75488539	75497142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75491541_75495399
ES.12084.7	chr15	+	3790	3	NNC	ENSMUSG00000047003.16	novel	3540	3	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	12	True	AGTAAA	-12	NA	75488539	75497144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75488670_75489892_75491808_75495399
ES.12084.8	chr15	+	3729	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	9	4532	9	-5	multi-exon	FALSE	canonical	2	8	junction_1	23	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTCCTGTGCTCTGTT	NA	False	NA	12	True	AGTAAA	-12	NA	75488541	75497144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75488878_75489892_75491541_75495399
ES.12085.1	chr15	+	1267	1	NIC	ENSMUSG00000099034.8	novel	530	2	NA	NA	-274	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTCTTCTTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	75515060	75516327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75515100_75516300
ES.12086.1	chr15	-	178	1	Antisense	novelGene_ENSMUSG00000099034.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGCAAGCGGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	75524377	75524199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_75524200_75524400
ES.12087.1	chr15	-	1970	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	-31	-36	-31	36	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACACTGACTGACCTTG	NA	False	NA	29	True	NA	NA	NA	75550680	75528847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ES.12087.2	chr15	-	3622	11	NNC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	26	30	intron_retention	FALSE	canonical	0	0	junction_6	38.3583107031579	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCCAACAACACTGACTG	NA	False	NA	23	True	AATAAA	-41	NA	75550623	75528853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75539455_75539591_75540620_75541135_75541324_75541910_75542034_75547867_75547981_75550501
ES.12087.3	chr15	-	6668	3	NIC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	4001	2	intron_retention	FALSE	canonical	3	103	junction_2	2	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGTCACTGTGACCT	NA	False	NA	-5	True	AATAAA	-13	NA	75536582	75528881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75529064_75529532_75535300_75535863
ES.12087.4	chr15	-	3214	12	NIC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	5	2	intron_retention	FALSE	canonical	3	71	junction_6	11.5372196831182	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGTCACTGTGACCT	NA	False	NA	-5	True	AATAAA	-13	NA	75550644	75528881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ES.12087.5	chr15	-	3664	12	NIC	ENSMUSG00000000934.10	novel	1903	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	75	junction_8	10.0708235811827	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTCACTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	75550652	75528883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75539455_75539670_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ES.12088.1	chr15	+	3366	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	-7	1	-7	-1	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCATTACATGATAATCA	NA	False	NA	NA	False	AATAAA	-15	NA	75576121	75587333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
ES.12088.2	chr15	+	2148	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	138	1074	24	1	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGAGTCGGGTACTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	75576266	75586260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
ES.12088.3	chr15	+	2763	5	NIC	ENSMUSG00000022580.14	novel	2605	14	NA	NA	-598	0	intron_retention	FALSE	canonical	1	2	junction_2	3.278719262151	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGAGTCTGAGTCGGG	NA	False	NA	NA	False	ATTAAA	-14	NA	75581989	75586254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75583031_75583402_75584301_75584850_75584928_75585067_75585461_75585900
ES.12088.4	chr15	+	2582	4	NIC	ENSMUSG00000022580.14	novel	2146	11	NA	NA	-349	-1	intron_retention	FALSE	canonical	2	2	junction_1	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCATTACATGATAATCA	NA	False	NA	NA	False	AATAAA	-15	NA	75584087	75587333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75584928_75585067_75585215_75585298_75585461_75585900
ES.12088.5	chr15	+	1991	3	NIC	ENSMUSG00000022580.14	novel	2283	14	NA	NA	-303	-3	intron_retention	FALSE	canonical	1	2	junction_1	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCCATTACATGATAAT	NA	False	NA	NA	False	AATAAA	-13	NA	75584133	75587331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75584301_75585067_75585461_75585900
ES.12089.1	chr15	-	2825	1	FSM	ENSMUSG00000047591.6	ENSMUST00000062002.6	2739	1	-93	7	-93	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGCTGTTGTGTCTG	NA	False	NA	-9	True	AATAAA	-23	NA	75620170	75617345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75617300_75620200
ES.1209.1	chr1	-	209	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTTCTTAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	120021787	120021578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120021600_120021800
ES.12090.1	chr15	+	1788	1	Intergenic	novelGene_10101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATATAGGATTGACCC	690	False	NA	NA	False	NA	NA	NA	75643229	75645017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75643200_75645000
ES.12091.1	chr15	-	3488	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	-126	0	-126	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713890	75626278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.10	chr15	-	15056	1	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	43370	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75641338	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626300_75641300
ES.12091.11	chr15	-	3580	10	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	58	junction_6	47.8774154855945	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713767	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.12	chr15	-	4086	10	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	58	junction_6	47.0384660033745	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713775	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75629574_75648838_75648971_75650914_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.13	chr15	-	3349	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-34	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	63.7185216401008	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713798	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.14	chr15	-	3187	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	11	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	62.1579439814413	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTAGTTGGCCTGTCTTGA	NA	False	NA	-6	True	AATAAA	-14	NA	75713753	75626283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.15	chr15	-	3442	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	58	junction_7	46.6561893000275	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTAGTTGGCCTGTCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	75713775	75626284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.16	chr15	-	3408	13	NNC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	66.9128786806645	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTAGTTGGCCTGTCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	75713768	75626284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75680731_75680780_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.2	chr15	-	3964	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-29	0	intron_retention	FALSE	canonical	3	58	junction_7	46.0005434750504	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713793	75626278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.3	chr15	-	2160	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-108	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	63.9518568925094	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTGTCTTGACTAC	NA	False	NA	-2	True	AATAAA	-18	NA	75713872	75626279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75713698
ES.12091.5	chr15	-	3405	13	NNC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	66.7513524623701	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGCCTGTCTTGACTA	NA	False	NA	-3	True	AATAAA	-17	NA	75713754	75626280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75678790_75678846_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.6	chr15	-	3536	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	58	junction_7	45.6596101604033	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGCCTGTCTTGACTA	NA	False	NA	-3	True	AATAAA	-17	NA	75713796	75626280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.7	chr15	-	3392	12	NNC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	61.3915761308888	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGGCCTGTCTTGACT	NA	False	NA	-4	True	AATAAA	-16	NA	75713767	75626281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712444_75713698
ES.12091.8	chr15	-	4159	9	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	58	junction_5	49.4720565066786	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713773	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75626800_75628471_75629574_75648838_75648971_75650914_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12091.9	chr15	-	5242	9	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	7	-4	intron_retention	FALSE	canonical	3	58	junction_5	43.3443695882176	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGGCCTGTCTTGAC	NA	False	NA	-5	True	AATAAA	-15	NA	75713757	75626282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75628816_75629388_75629574_75648838_75648971_75650914_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ES.12092.1	chr15	+	3894	1	Intergenic	novelGene_10102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAACA	9631	False	NA	NA	False	NA	NA	NA	75713939	75717833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75713900_75717800
ES.12092.2	chr15	+	3404	1	Intergenic	novelGene_10103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCACTGCGTCAAGAATT	9670	False	NA	NA	False	AATAAA	-28	NA	75713978	75717382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75714000_75717400
ES.12092.3	chr15	+	998	1	Intergenic	novelGene_10104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAGAA	9680	False	NA	NA	False	NA	NA	NA	75713988	75714986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75714000_75715000
ES.12093.1	chr15	+	173	1	Intergenic	novelGene_10105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATAAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	75718799	75718972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75718800_75719000
ES.12094.1	chr15	+	963	1	Intergenic	novelGene_10106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGATATGTACATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	75720056	75721019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75720100_75721000
ES.12095.1	chr15	+	180	1	Intergenic	novelGene_10107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	75722443	75722623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75722400_75722600
ES.12096.1	chr15	+	159	1	Intergenic	novelGene_10108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75723648	75723807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75723600_75723800
ES.12097.1	chr15	-	156	1	Intergenic	novelGene_10109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	75724242	75724086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75724100_75724200
ES.12098.1	chr15	+	2501	10	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-99	4	intron_retention	FALSE	canonical	3	31	junction_2	6.87992248018343	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATGCTGTGTTGAGGGG	NA	False	NA	10	True	AATAAA	-15	NA	75734076	75739252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75734331_75735253_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.10	chr15	+	1775	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	15	2	3	-2	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	13	True	AATAAA	-18	NA	75734190	75739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.11	chr15	+	2473	10	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-11	-4	intron_retention	FALSE	canonical	1	2	junction_1	14.9517743280039	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734201	75739253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75734331_75735157_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.2	chr15	+	1686	10	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-89	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	13.1740485635797	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	13	True	AATAAA	-18	NA	75734086	75739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75734331_75735253_75735478_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.3	chr15	+	2995	9	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-57	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	16.1477552619551	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	13	True	AATAAA	-18	NA	75734118	75739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75734352_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.4	chr15	+	3905	5	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	41	junction_1	2.06155281280883	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	13	True	AATAAA	-18	NA	75734121	75739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75734331_75735253_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.5	chr15	+	1850	11	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-50	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.9679657936541	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734125	75739253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738626_75738713_75738845
ES.12098.6	chr15	+	2929	9	NIC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	41	junction_1	5.42995165724337	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGTTGAGGGGTAC	NA	False	NA	13	True	AATAAA	-18	NA	75734163	75739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75734331_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.7	chr15	+	2942	9	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-10	-4	intron_retention	FALSE	canonical	0	0	junction_7	16.1395283388332	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734165	75739253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75734331_75735253_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738621_75738713_75738845
ES.12098.8	chr15	+	2836	10	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_2	14.9294637843725	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATAATGCTGTGTTGA	NA	False	NA	6	True	AATAAA	-11	NA	75734166	75739248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75734331_75735253_75735303_75735385_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ES.12098.9	chr15	+	3246	8	NNC	ENSMUSG00000022575.6	novel	1792	11	NA	NA	-9	-4	intron_retention	FALSE	canonical	0	0	junction_6	17.2520333022292	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGTGTTGAGGGGT	NA	False	NA	11	True	AATAAA	-16	NA	75734166	75739253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75734331_75735253_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738621_75738713_75738845
ES.12099.1	chr15	+	1636	3	Intergenic	novelGene_10113	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCACTTTGTAGAC	NA	False	NA	NA	False	NA	NA	NA	75740939	75744753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75741954_75743123_75743213_75744220
ES.12099.2	chr15	+	267	1	Intergenic	novelGene_10123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAAGTTCCTGCCTTGT	NA	False	NA	NA	False	NA	NA	NA	75742654	75742921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75742700_75742900
ES.12099.3	chr15	+	154	1	Intergenic	novelGene_10124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	75742656	75742810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75742700_75742800
ES.121.1	chr1	+	176	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACTGAGTAGTAA	NA	False	NA	NA	False	NA	NA	NA	13447656	13447832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13447700_13447800
ES.1210.1	chr1	+	176	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTGAGAAAGCAGAGTT	NA	False	NA	NA	False	NA	NA	NA	120025759	120025935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_120025800_120025900
ES.12100.1	chr15	+	653	1	Intergenic	novelGene_10132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATCCAGGTAATAGC	NA	False	NA	NA	False	NA	NA	NA	75752793	75753446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75752800_75753400
ES.12101.1	chr15	-	3052	5	Intergenic	novelGene_10110	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	32.5297940356222	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGGTCATGAAG	NA	False	NA	NA	False	NA	NA	NA	75754362	75739575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744432_75748129_75748389_75754245
ES.12101.10	chr15	-	1191	5	Intergenic	novelGene_10120	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGTCTAATCTGGCCT	NA	False	NA	-2	True	NA	NA	NA	75754362	75741423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
ES.12101.11	chr15	-	962	4	Intergenic	novelGene_10122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGTCTAATCTGGCCT	NA	False	NA	-2	True	NA	NA	NA	75754392	75741423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
ES.12101.12	chr15	-	1033	5	Intergenic	novelGene_10121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	38.2516339520288	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGTCTAATCTGGCCT	NA	False	NA	-2	True	NA	NA	NA	75754362	75741423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75753622_75753724_75754245
ES.12101.13	chr15	-	2134	1	Intergenic	novelGene_10125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75748871	75746737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75746700_75748900
ES.12101.14	chr15	-	2277	1	Intergenic	novelGene_10126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTCTGGGGTATCAT	NA	False	NA	NA	False	NA	NA	NA	75749309	75747032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75747000_75749300
ES.12101.15	chr15	-	2096	1	Intergenic	novelGene_10127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAGACTAGGCC	NA	False	NA	NA	False	NA	NA	NA	75749415	75747319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75747300_75749400
ES.12101.16	chr15	-	3648	1	Intergenic	novelGene_10128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGCTTTTACTTGT	NA	False	NA	NA	False	TTTAAA	-1	NA	75752490	75748842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75748800_75752500
ES.12101.17	chr15	-	4850	1	Intergenic	novelGene_10129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75754406	75749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75749600_75754400
ES.12101.18	chr15	-	1922	1	Intergenic	novelGene_10130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGAGCCATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	75753275	75751353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75751400_75753300
ES.12101.19	chr15	-	2727	2	Intergenic	novelGene_10131	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTCTGCCTGTATGTA	NA	False	NA	NA	False	AAAAAG	-20	NA	75754364	75751485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75753262_75753413
ES.12101.2	chr15	-	2803	4	Intergenic	novelGene_10111	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	75754387	75739577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
ES.12101.20	chr15	-	1171	2	Intergenic	novelGene_10133	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAATGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	75754362	75753091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75753523_75753622
ES.12101.21	chr15	-	575	2	Intergenic	novelGene_10134	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTGCCTCAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	75754391	75753093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75753523_75754245
ES.12101.22	chr15	-	4013	8	NNC	ENSMUSG00000098678.2	novel	2216	14	NA	NA	2474	2891	intron_retention	TRUE	non_canonical	0	0	junction_1	0.451753951452626	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCTGCCTCAATGGTT	NA	False	NA	NA	False	NA	NA	NA	75758145	75753094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75753272_75753426_75756420_75756502_75756606_75756793_75756914_75757135_75757304_75757529_75757704_75757783_75757928_75758011
ES.12101.23	chr15	-	1117	2	Intergenic	novelGene_10135	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTACCTGCCTCAATGGT	NA	False	NA	NA	False	NA	NA	NA	75754364	75753095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75753262_75753413
ES.12101.24	chr15	-	6003	18	NNC	ENSMUSG00000098678.2	novel	2216	14	NA	NA	-1852	2889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.691020007321808	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTACCTGCCTCAATGG	NA	False	NA	NA	False	NA	NA	NA	75762471	75753096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75753262_75753413_75753523_75753622_75753724_75754245_75754336_75754515_75756219_75756353_75756420_75756502_75756606_75756793_75756914_75757135_75757304_75757529_75757704_75757783_75757928_75758011_75758127_75758256_75758395_75758481_75758667_75758849_75758968_75759570_75759726_75759882_75760036_75760275
ES.12101.25	chr15	-	7956	19	Fusion	ENSMUSG00000098678.2_ENSMUSG00000022574.8	novel	2216	14	NA	NA	-161	2184	intron_retention	FALSE	canonical	0	0	junction_1	16.0227461772859	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAATGTTCACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75764578	75753801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_75756219_75756353_75756420_75756502_75756606_75756793_75756914_75757135_75757304_75757529_75757704_75757783_75757928_75758011_75758127_75758204_75758395_75758481_75758667_75758849_75758968_75759570_75759726_75759882_75760036_75760275_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811
ES.12101.26	chr15	-	150	1	Intergenic	novelGene_10136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCCTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75754362	75754212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75754200_75754400
ES.12101.27	chr15	-	1831	12	ISM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	228	8	37	-1	intron_retention	FALSE	canonical	3	20	junction_8	7.38884573680585	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCAGCCATGTGTCGT	NA	False	NA	NA	False	CATAAA	-22	NA	75766102	75762812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568
ES.12101.28	chr15	-	2281	10	NIC	ENSMUSG00000022574.8	novel	1898	13	NA	NA	10	1	intron_retention	FALSE	canonical	3	26	junction_8	5.10144012588844	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTCAGCCATGTGTC	NA	False	NA	NA	False	CATAAA	-20	NA	75766129	75762814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75765070_75765154_75765286_75765401_75765485_75765568
ES.12101.29	chr15	-	2928	6	ISM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	133	10	-58	1	intron_retention	FALSE	canonical	3	31	junction_1	4.16653333119993	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTCAGCCATGTGTC	NA	False	NA	NA	False	CATAAA	-20	NA	75766197	75762814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811
ES.12101.3	chr15	-	3036	5	Intergenic	novelGene_10112	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	75754363	75739579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
ES.12101.4	chr15	-	1432	5	Intergenic	novelGene_10115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	32.5297940356222	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75754362	75741195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744432_75748129_75748389_75754245
ES.12101.5	chr15	-	1160	4	Intergenic	novelGene_10116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75754362	75741195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
ES.12101.6	chr15	-	1242	4	Intergenic	novelGene_10117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	35.5933826558939	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75754362	75741195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744501_75754245
ES.12101.7	chr15	-	1421	5	Intergenic	novelGene_10118	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75754364	75741195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
ES.12101.8	chr15	-	5605	3	Intergenic	novelGene_10114	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	38	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGGT	154	False	NA	NA	False	NA	NA	NA	75748166	75741195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75745710_75745905
ES.12101.9	chr15	-	925	4	Intergenic	novelGene_10119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	35.5933826558939	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGTCTAATCTGGCCT	NA	False	NA	-2	True	NA	NA	NA	75754342	75741423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744432_75754245
ES.12102.1	chr15	-	1700	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	1106.37850112658	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACCTGCCTCTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	75781398	75766644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781308
ES.12102.11	chr15	-	4995	5	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2867	junction_3	236.438549098915	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781146	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75772612_75772980_75773105_75781093
ES.12102.14	chr15	-	978	8	NNC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1117.65410296637	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781391	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781327
ES.12102.15	chr15	-	1047	8	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	1106.37850112658	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781438	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781308
ES.12102.18	chr15	-	1119	7	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2715	junction_4	227.573248281368	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781155	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ES.12102.19	chr15	-	1475	4	NIC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	464	junction_2	1308.34152863675	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781153	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75768769_75772980_75773105_75781093
ES.12102.2	chr15	-	1670	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	49	593	0	2	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCACCTGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	75781155	75766646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ES.12102.20	chr15	-	1263	6	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	16	-1	intron_retention	FALSE	canonical	3	2715	junction_3	246.75088652323	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781124	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767776_75768091_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ES.12102.21	chr15	-	4750	7	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2867	junction_5	193.956538659796	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781155	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75772612_75772980_75773105_75781093
ES.12102.23	chr15	-	1300	5	NIC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	464	junction_3	1188.77857484058	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781153	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75768314_75768488_75768769_75772980_75773105_75781093
ES.12102.25	chr15	-	1505	4	NIC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	33	junction_3	1494.61054012966	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781398	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75768769_75772980_75773105_75781308
ES.12102.26	chr15	-	2108	9	NIC	ENSMUSG00000055762.17	novel	2152	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	1368.87366450487	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGCCTCTTGTGTTAC	NA	False	NA	-8	True	ATTAAA	-14	NA	75781155	75767338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75774527_75775658_75781093
ES.12102.27	chr15	-	1615	3	NIC	ENSMUSG00000055762.17	novel	1624	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	464	junction_1	1292.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCCGCCTCTTGTGTTA	NA	False	NA	-9	True	ATTAAA	-13	NA	75781155	75767339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75768769_75772980_75773105_75781093
ES.12102.3	chr15	-	1022	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	10	1280	-5	3	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGTGTTACTTGGT	NA	False	NA	-3	True	ATTAAA	-19	NA	75781194	75767333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ES.12102.4	chr15	-	1060	7	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	2	3	intron_retention	FALSE	canonical	3	2715	junction_4	258.858820380703	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCTTGTGTTACTTGGT	NA	False	NA	-3	True	ATTAAA	-19	NA	75781153	75767333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768769_75772539_75772612_75772980_75773105_75781093
ES.12102.5	chr15	-	5260	5	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	2867	junction_3	192.934412430753	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781173	75767336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75768590_75768668_75772612_75772980_75773105_75781093
ES.12102.6	chr15	-	4913	6	NIC	ENSMUSG00000055762.17	novel	896	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	250	junction_5	1203.62562285787	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781145	75767336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768590_75768668_75772612_75772980_75773102_75781093
ES.12102.7	chr15	-	1036	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781155	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
ES.12102.9	chr15	-	926	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	9	689	4	-1	multi-exon	FALSE	canonical	3	464	junction_5	1042.33482571048	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	False	NA	-7	True	ATTAAA	-15	NA	75781174	75767337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ES.12103.1	chr15	+	2528	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	-95	2368	-95	-2368	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATGAGTGCTGACTGA	NA	False	NA	NA	False	ATTAAA	-29	NA	75781488	75784016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75781500_75784000
ES.12104.1	chr15	-	5819	1	Genic_Genomic	ENSMUSG00000022571.10	novel	NA	NA	NA	NA	73	808	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGATATTGTTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	75793336	75787517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_75787500_75793300
ES.12104.10	chr15	-	1401	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	-35	-31	-1	24	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCACAGTGTAGCCTTC	8884	False	NA	2	True	NA	NA	NA	75801637	75796500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ES.12104.11	chr15	-	1426	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	-22	1	-1	-1	multi-exon	FALSE	canonical	3	16	junction_6	184.382889661704	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAAGCTGGGCCAGCC	8924	False	NA	-23	True	AATAAA	-21	NA	75801597	75796525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ES.12104.12	chr15	-	1152	10	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	157.535181255913	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAAGCTGGGCCAGCC	8913	False	NA	-23	True	AATAAA	-21	NA	75801608	75796525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75800277_75800393_75800740_75800899_75801567
ES.12104.15	chr15	-	1315	11	NNC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.958575109608	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCAGAAGCTGGGCCA	8934	False	NA	-26	True	AATAAA	-18	NA	75801587	75796528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797649_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ES.12104.16	chr15	-	3495	7	NNC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	5	junction_2	184.724494555781	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8913	False	NA	-30	True	AATAAA	-14	NA	75801608	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797855_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75800899_75801501
ES.12104.17	chr15	-	1394	11	NIC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	180.942421781074	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8883	False	NA	-30	True	AATAAA	-14	NA	75801638	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ES.12104.18	chr15	-	2994	9	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	27	junction_5	160.281783119605	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8908	False	NA	-30	True	AATAAA	-14	NA	75801613	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75800899_75801567
ES.12104.19	chr15	-	4096	6	NIC	ENSMUSG00000022570.8	novel	1431	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	456	junction_2	12.280065146407	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8912	False	NA	-30	True	AATAAA	-14	NA	75801609	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798722_75798815
ES.12104.2	chr15	-	1362	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	-10	-13	-10	13	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGTTGTACTTTGGTT	NA	False	NA	0	True	NA	NA	NA	75793419	75788312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ES.12104.20	chr15	-	1294	11	NIC	ENSMUSG00000022570.8	novel	1319	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	144.428667514452	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ES.12104.21	chr15	-	3302	8	NNC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1	junction_3	172.929972850874	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8913	False	NA	-30	True	AATAAA	-14	NA	75801608	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797512_75797641_75797858_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75800899_75801567
ES.12104.22	chr15	-	1272	11	NNC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.682458553481	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8971	False	NA	-30	True	AATAAA	-14	NA	75801550	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797137_75797234_75797437_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ES.12104.23	chr15	-	3101	9	NNC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_4	199.437803587986	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8913	False	NA	-30	True	AATAAA	-14	NA	75801608	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797762_75797977_75798043_75798138_75798722_75798815_75800393_75800740_75800899_75801501
ES.12104.24	chr15	-	1438	10	NIC	ENSMUSG00000022570.8	novel	1319	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	27	junction_4	149.530458518294	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8913	False	NA	-30	True	AATAAA	-14	NA	75801608	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ES.12104.25	chr15	-	2732	9	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	225	junction_8	81.9969511628329	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8918	False	NA	-30	True	AATAAA	-14	NA	75801603	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75800393_75800740_75800899_75801567
ES.12104.26	chr15	-	3965	7	NIC	ENSMUSG00000022570.8	novel	1431	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	441	junction_5	17.7709188157381	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8913	False	NA	-30	True	AATAAA	-14	NA	75801608	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798722_75798815
ES.12104.28	chr15	-	1232	9	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_8	154.961638398024	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75801567
ES.12104.29	chr15	-	1221	11	NNC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	150.008133112842	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798686_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ES.12104.3	chr15	-	1652	5	NIC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	71	8	intron_retention	FALSE	canonical	3	236	junction_1	16.9908063375462	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGAGTTGTACTT	NA	False	NA	-5	True	NA	NA	NA	75793338	75788317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75791143_75793224
ES.12104.30	chr15	-	2618	8	NIC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	415	junction_7	25.8109294995871	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798722_75798815_75798945_75800277
ES.12104.31	chr15	-	2659	10	NIC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	182	junction_9	91.671447686767	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75800393_75800740_75800899_75801501
ES.12104.32	chr15	-	3139	8	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	225	junction_7	88.7169311774873	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8927	False	NA	-30	True	AATAAA	-14	NA	75801594	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75800899_75801567
ES.12104.33	chr15	-	3483	7	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	225	junction_6	94.5844713587924	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8924	False	NA	-30	True	AATAAA	-14	NA	75801597	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797512_75797641_75797709_75797977_75798043_75798172_75798722_75798815_75800899_75801567
ES.12104.34	chr15	-	3579	7	NIC	ENSMUSG00000022570.8	novel	1319	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	27	junction_4	173.929104330855	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	8933	False	NA	-30	True	AATAAA	-14	NA	75801588	75796532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75798043_75798138_75798722_75798815_75800899_75801567
ES.12104.35	chr15	-	1221	11	NNC	ENSMUSG00000022570.8	novel	1335	11	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	194.83161961037	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTGGACTCAGAAGCTG	8979	False	NA	-31	True	AATAAA	-13	NA	75801542	75796533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798039_75798172_75798307_75798647_75798722_75798815_75798897_75800277_75800393_75800740_75800899_75801501
ES.12104.37	chr15	-	3098	8	NIC	ENSMUSG00000022570.8	novel	1603	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	27	junction_4	167.488775134092	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTGGACTCAGAAGCT	8932	False	NA	-32	True	AATAAA	-12	NA	75801589	75796534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797709_75797977_75798043_75798138_75798307_75798647_75798722_75798815_75800899_75801567
ES.12104.38	chr15	-	3425	7	NIC	ENSMUSG00000022570.8	novel	1355	11	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	225	junction_6	94.9515958557599	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTGGACTCAGAAGCT	8912	False	NA	-32	True	AATAAA	-12	NA	75801609	75796534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798722_75798815_75800899_75801567
ES.12104.39	chr15	-	4328	5	NIC	ENSMUSG00000022570.8	novel	1431	10	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	479	junction_2	6.10327780786685	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTGGACTCAGAAGCT	8876	False	NA	-32	True	AATAAA	-12	NA	75801645	75796534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797512_75797641_75797709_75797977_75798722_75798815
ES.12104.4	chr15	-	1111	7	NNC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.5887376497296	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGACTTTAGTAGAGT	NA	False	NA	-12	True	NA	NA	NA	75793371	75788324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75788504_75788694_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ES.12104.40	chr15	-	1489	7	NIC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	-190	-4	intron_retention	FALSE	canonical	3	27	junction_5	168.451196361307	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCTGGACTCAGAAGC	NA	False	NA	-33	True	AATAAA	-11	NA	75799101	75796535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798722_75798815
ES.12104.5	chr15	-	2351	4	NIC	ENSMUSG00000022571.10	novel	1339	6	NA	NA	67	0	intron_retention	FALSE	canonical	3	262	junction_2	6.23609564462324	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793342	75788325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75790314_75790521_75790702_75791077_75791143_75793224
ES.12104.7	chr15	-	900	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	91	348	91	-348	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGTGGGCAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	75793318	75788673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ES.12104.8	chr15	-	4961	11	FSM	ENSMUSG00000022571.10_ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	-3	-3623	-3	3616	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCACGTGTGACTTCT	8916	False	NA	NA	False	ATTAAA	-13	NA	75801605	75792908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ES.12104.9	chr15	-	1393	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	25	-63	-20	63	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTGGCCTGGGACCC	8865	False	NA	41	True	NA	NA	NA	75801656	75796461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ES.12105.1	chr15	+	160	1	Intergenic	novelGene_10137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGTAGGTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	75804192	75804352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75804200_75804400
ES.12106.1	chr15	+	2406	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	80	0	80	0	multi-exon	FALSE	canonical	3	106	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGTGTAATTGGCATA	NA	False	NA	10	True	AATAAA	-16	NA	75812880	75821249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75813009_75818971
ES.12106.2	chr15	+	2691	2	NNC	ENSMUSG00000050846.10	novel	2486	2	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGTGTAATTGGCATA	NA	False	NA	10	True	AATAAA	-16	NA	75812887	75821249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75813301_75818971
ES.12106.3	chr15	+	8364	1	Genic_Genomic	ENSMUSG00000050846.10	novel	NA	NA	NA	NA	87	2	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTAATTGGCATATC	NA	False	NA	12	True	AATAAA	-18	NA	75812887	75821251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_75812900_75821300
ES.12106.4	chr15	+	2365	2	NNC	ENSMUSG00000050846.10	novel	2486	2	NA	NA	88	-21	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAAACAAAAATCC	NA	False	NA	-11	True	NA	NA	NA	75812888	75821228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75813009_75818983
ES.12106.5	chr15	+	8236	1	NIC	ENSMUSG00000050846.10	novel	2486	2	NA	NA	108	-105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTTCCTGTTTTGC	NA	False	NA	-95	True	ATTAAA	-16	NA	75812908	75821144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75812900_75821100
ES.12107.1	chr15	+	172	1	Intergenic	novelGene_10138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATGTGTAAAAAA	1861	False	NA	NA	False	NA	NA	NA	75824070	75824242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75824100_75824200
ES.12108.1	chr15	+	1782	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	16	5	16	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGAGAAGCCTGTTCTT	NA	False	NA	6	True	AATAAA	-11	NA	75840987	75847593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ES.12108.2	chr15	+	1603	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109967.10	1703	4	98	2	-30	0	multi-exon	FALSE	canonical	1	1	junction_1	16.779617264871	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGAGAAGCCTGTTCTT	NA	False	NA	6	True	AATAAA	-11	NA	75841125	75847593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75841254_75844971_75845058_75845390_75845505_75846318
ES.12108.3	chr15	+	5125	3	FSM	ENSMUSG00000034429.16	ENSMUST00000229652.2	2204	3	-2909	-12	168	0	multi-exon	FALSE	canonical	3	24	junction_2	9	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAAGCCTGTTCTTCA	NA	False	NA	8	True	AATAAA	-13	NA	75841323	75847595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75845058_75845390_75845505_75846318
ES.12108.4	chr15	+	2864	2	FSM	ENSMUSG00000034429.16	ENSMUST00000156444.2	835	2	-235	-1794	164	0	multi-exon	FALSE	canonical	3	42	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGAGAAGCCTGTTCTT	2288	False	NA	6	True	AATAAA	-11	NA	75844396	75847593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_75845058_75845390
ES.12109.1	chr15	-	178	1	Intergenic	novelGene_10139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	75851020	75850842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75850800_75851000
ES.1211.1	chr1	-	542	4	NNC	ENSMUSG00000026385.17	novel	569	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1300.61763105927	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	False	NA	-1	True	ATTAAA	-29	NA	120048798	120041009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_120041264_120044132_120044179_120047624_120047743_120048674
ES.1211.2	chr1	-	567	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	-6	8	-6	2	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTACTCTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-21	NA	120048814	120041017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ES.1211.3	chr1	-	541	4	NNC	ENSMUSG00000026385.17	novel	569	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_3	1275.59720218501	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGTTACTCTGTTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	120048801	120041019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_120041264_120044115_120044179_120047624_120047743_120048685
ES.1211.4	chr1	-	6809	2	FSM	ENSMUSG00000026385.17	ENSMUST00000149628.2	331	2	-23	-6455	10	-7	multi-exon	FALSE	canonical	3	2752	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGCCTGGGTTACT	NA	False	NA	-18	True	ATTAAA	-12	NA	120048767	120041026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_120047743_120048674
ES.12110.1	chr15	-	2104	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	479	1	466	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGTTGTCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	75853825	75851721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75851700_75853800
ES.12110.2	chr15	-	1979	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	478	1	478	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGTTGTCTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	75853813	75851721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75853537_75853649
ES.12110.3	chr15	-	1295	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	484	805	471	-805	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGCTCTGTGACGCTC	NA	False	NA	NA	False	AATAAA	-7	NA	75853820	75852525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75852500_75853800
ES.12111.1	chr15	+	178	1	Intergenic	novelGene_10140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTATTGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	75858424	75858602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_75858400_75858600
ES.12112.1	chr15	+	2634	9	NNC	ENSMUSG00000063704.14	novel	1931	14	NA	NA	-2	-1	intron_retention	TRUE	canonical	0	0	junction_2	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGGATAAGCCATCTTT	1853	False	NA	NA	False	AATAAA	-15	NA	75865615	75871001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_75865778_75866693_75866793_75867082_75867174_75867675_75868364_75868801_75869018_75869328_75869557_75869676_75870324_75870398_75870528_75870627
ES.12112.2	chr15	+	2533	8	NIC	ENSMUSG00000063704.14	novel	1931	14	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_2	1.1780301787479	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCGGATAAGCCATCTT	1866	False	NA	NA	False	AATAAA	-14	NA	75865628	75871000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_75865778_75866693_75866793_75867082_75867174_75867634_75868364_75868959_75869018_75869418_75870324_75870398_75870528_75870627
ES.12113.1	chr15	-	5440	4	NIC	ENSMUSG00000046761.14	novel	4534	5	NA	NA	-25	812	intron_retention	FALSE	canonical	3	7	junction_2	0.471404520791032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAGGCAAAAAAA	7397	False	NA	NA	False	NA	NA	NA	75881372	75872129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75876599_75876789_75877149_75877949_75878412_75881222
ES.12113.2	chr15	-	4897	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	-325	-38	-325	38	multi-exon	FALSE	canonical	1	3	junction_2	2.06155281280883	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCATGTCTATAGTGT	7097	False	NA	NA	False	AGTAAA	-21	NA	75881672	75872903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
ES.12113.3	chr15	-	4637	4	NIC	ENSMUSG00000046761.14	novel	4534	5	NA	NA	-44	-10	intron_retention	FALSE	canonical	3	7	junction_2	0.471404520791032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTGTGATCCCAAGCC	7378	False	NA	NA	False	AATAAA	-14	NA	75881391	75872951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75876599_75876789_75877149_75877949_75878412_75881222
ES.12114.1	chr15	-	214	1	Intergenic	novelGene_10141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACAAGGTAGGCGCT	8818	False	NA	NA	False	NA	NA	NA	75900762	75900548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_75900500_75900800
ES.12115.1	chr15	-	6010	38	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	18	1131	intron_retention	FALSE	canonical	0	0	junction_1	96.1145758319883	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGCCTCGGAGCTACCGC	NA	False	NA	NA	False	NA	NA	NA	75941585	75917875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75918608_75919234_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.10	chr15	-	7260	30	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	25	0	intron_retention	FALSE	canonical	3	14	junction_23	101.493215391529	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941578	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75920214_75920290_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931656_75932415_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.101	chr15	-	5465	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	40	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	112.028721377958	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941563	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920786_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935597_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.103	chr15	-	4649	13	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	1792	-7	intron_retention	FALSE	canonical	3	330	junction_8	48.5771865751358	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75932776	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920214_75920290_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415
ES.12115.105	chr15	-	3629	25	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	50	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	90.9931220691371	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941553	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936347_75941482
ES.12115.106	chr15	-	5491	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	38	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	81.5720964571539	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941565	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923601_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.108	chr15	-	5234	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_28	95.5323999822405	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941581	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938029_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.109	chr15	-	5333	36	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_29	98.3263869332487	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941593	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938029_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.11	chr15	-	4780	9	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	4616	0	intron_retention	FALSE	canonical	3	330	junction_8	47.0285817349407	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75929952	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920707_75920782_75920943_75921051_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874
ES.12115.110	chr15	-	6026	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	15	-7	intron_retention	FALSE	canonical	0	0	junction_19	99.2290526910299	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941588	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933189_75933309_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.111	chr15	-	3544	3	NIC	ENSMUSG00000022568.18	novel	454	4	NA	NA	-129	-7	intron_retention	FALSE	canonical	2	20	junction_2	197	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	7022	False	NA	-8	True	AATAAA	-14	NA	75922764	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75920707_75920782_75920921_75921051
ES.12115.112	chr15	-	5352	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	47	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	80.2963693997151	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTTCTCTTGTCCTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	75941556	75919014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929755_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.113	chr15	-	5510	36	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	22	-8	intron_retention	FALSE	canonical	0	0	junction_26	98.4109003419969	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTTCTCTTGTCCTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	75941581	75919014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936804_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.114	chr15	-	3551	5	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	4972	-8	intron_retention	FALSE	canonical	3	361	junction_3	32.6113477182407	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTTCTCTTGTCCTTTT	190	False	NA	-9	True	AATAAA	-13	NA	75929596	75919014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235
ES.12115.116	chr15	-	5012	35	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	382	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	79.0445595062889	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTTCTCTTGTCCTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	75941221	75919014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.117	chr15	-	5379	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	27	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	94.747113466343	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACCTTCTCTTGTCCTT	NA	False	NA	-11	True	AATAAA	-11	NA	75941576	75919016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929953_75930798_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.12	chr15	-	5473	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	111.546241726066	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941553	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920471_75920554_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934517_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.14	chr15	-	5979	34	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	46	-1	intron_retention	FALSE	canonical	2	20	junction_7	78.7623035413314	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTCCTTTTGTCCTGC	NA	False	NA	-2	True	AATAAA	-20	NA	75941557	75919007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.15	chr15	-	5351	35	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	99.7841832055215	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTCCTTTTGTCCTG	NA	False	NA	-3	True	AATAAA	-19	NA	75941609	75919008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938601_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.16	chr15	-	4446	6	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	5242	-2	intron_retention	FALSE	canonical	3	414	junction_3	30.7870102478302	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTCCTTTTGTCCTG	460	False	NA	-3	True	AATAAA	-19	NA	75929326	75919008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920477_75920558_75920707_75920782_75920943_75921051_75923714_75929235
ES.12115.17	chr15	-	4651	31	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	24	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	85.4736151621592	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTTTTGTCCT	NA	False	NA	-4	True	AATAAA	-18	NA	75941579	75919009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.18	chr15	-	5513	35	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-4	intron_retention	FALSE	canonical	3	289	junction_8	50.1543982898815	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941581	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.19	chr15	-	5116	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	396	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.7535170190498	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941207	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920699_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.2	chr15	-	5581	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-22	5	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTCCTGCCTGCTC	NA	False	NA	4	True	AATAAA	-26	NA	75941655	75919001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.20	chr15	-	5959	34	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	14	-4	intron_retention	FALSE	canonical	3	271	junction_28	51.1747577526035	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941589	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.21	chr15	-	6854	32	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	7	-4	intron_retention	FALSE	canonical	3	271	junction_26	51.5223399007164	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941596	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.24	chr15	-	5445	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	79.575783415072	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941600	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921163_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.26	chr15	-	5468	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	111.550558071992	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGTCCTTTTGTCC	NA	False	NA	-5	True	AATAAA	-17	NA	75941584	75919010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920177_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938454_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.27	chr15	-	5480	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	97.4399585626521	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941585	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931167_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.28	chr15	-	5165	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	80.3385489598835	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941564	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931425_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.29	chr15	-	5577	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	80.2046565903471	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941581	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936160_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.30	chr15	-	5482	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	37	-5	intron_retention	FALSE	canonical	0	0	junction_17	95.8101677030894	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941566	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931250_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.31	chr15	-	5552	36	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	32	-5	intron_retention	FALSE	canonical	3	96	junction_9	78.7235099599107	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941571	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.32	chr15	-	6027	33	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	14	-5	intron_retention	FALSE	canonical	3	289	junction_7	48.2033351899793	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941589	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.33	chr15	-	5227	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_28	108.702098387159	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941581	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936442_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938029_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.34	chr15	-	5635	35	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	242	-5	intron_retention	FALSE	canonical	3	271	junction_29	50.5474527815098	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941361	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.35	chr15	-	5582	36	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	25	-5	intron_retention	FALSE	canonical	0	0	junction_5	112.248485285903	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941578	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920471_75920554_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.36	chr15	-	6842	24	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	2373	-5	intron_retention	FALSE	canonical	0	0	junction_21	90.0953496174154	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75939230	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75920214_75920290_75920943_75921051_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938029_75938458_75938907_75938993_75939051_75939138
ES.12115.38	chr15	-	3897	27	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	-2305	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	138.28018572201	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75936873	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919770_75919846_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920867_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758
ES.12115.4	chr15	-	3911	1	Genic_Genomic	ENSMUSG00000022568.18	novel	NA	NA	NA	NA	-280	2	mono-exon	FALSE	NA	NA	NA	NA	NA	625	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTTTGTCCTGCCTG	6871	False	NA	1	True	AATAAA	-23	NA	75922915	75919004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_75919000_75922900
ES.12115.42	chr15	-	5080	37	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	79.3077057501856	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941613	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077_75941162_75941526
ES.12115.43	chr15	-	5396	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.8533513342642	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941601	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920445_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.45	chr15	-	5253	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	113.501505256546	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGTCCTTTTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	75941588	75919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933589_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.47	chr15	-	3771	13	NIC	ENSMUSG00000022568.18	novel	3071	22	NA	NA	2971	-6	intron_retention	FALSE	canonical	3	330	junction_10	49.1084400983058	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75931597	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920214_75920290_75920477_75920558_75920943_75921051_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929788_75929874_75929986_75930810_75931069_75931146
ES.12115.48	chr15	-	5457	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-6	intron_retention	FALSE	canonical	2	20	junction_7	94.3377756625363	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941581	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936442_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.49	chr15	-	5901	35	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	22	-6	intron_retention	FALSE	canonical	3	271	junction_29	52.8132113596366	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941581	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.5	chr15	-	5526	37	FSM	ENSMUSG00000022568.18	ENSMUST00000109946.9	5545	37	20	-1	-10	1	multi-exon	FALSE	canonical	2	7	junction_2	94.8852580296751	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCCTTTTGTCCTGCCT	NA	False	NA	0	True	AATAAA	-22	NA	75941613	75919005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75919387_75919469_75919522_75919770_75919846_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.51	chr15	-	4378	29	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	3039	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.0117820679394	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75938564	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919379_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458
ES.12115.54	chr15	-	5415	36	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_20	97.2009238219305	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941590	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.55	chr15	-	6150	35	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	32	-6	intron_retention	FALSE	canonical	3	271	junction_29	51.0964892245315	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941571	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.56	chr15	-	5527	37	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	21	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	124.325948047963	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941582	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921175_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75928572_75928668_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.57	chr15	-	3159	6	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	37	-6	intron_retention	FALSE	canonical	3	414	junction_2	32.3134646857931	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	7188	False	NA	-7	True	AATAAA	-15	NA	75922598	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051
ES.12115.63	chr15	-	5380	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	99.9179908623026	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941586	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934517_75934897_75935439_75935605_75936324_75936451_75936583_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.64	chr15	-	4338	18	NIC	ENSMUSG00000022568.18	novel	3071	22	NA	NA	1867	-6	intron_retention	FALSE	canonical	3	289	junction_8	51.8650764886118	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75932701	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415
ES.12115.65	chr15	-	2341	14	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	4955	-6	intron_retention	FALSE	canonical	3	96	junction_8	116.02356422564	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	173	False	NA	-7	True	AATAAA	-15	NA	75929613	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493
ES.12115.66	chr15	-	5517	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	97.4395467855725	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941578	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939253_75939325_75939405_75939509_75939628_75941077
ES.12115.67	chr15	-	5383	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.8222821942212	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941582	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920006_75920104_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.68	chr15	-	5446	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	44	-6	intron_retention	FALSE	canonical	3	45	junction_24	75.4504580920327	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941559	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936442_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.69	chr15	-	5599	36	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	18	-6	intron_retention	FALSE	canonical	3	96	junction_9	77.7751127499363	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941585	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.7	chr15	-	4626	27	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-2541	0	intron_retention	FALSE	canonical	2	20	junction_7	122.918888924517	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75937109	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998
ES.12115.70	chr15	-	4250	28	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-2358	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	142.915497781636	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75936926	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921963_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932608_75932709_75932879_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758
ES.12115.72	chr15	-	3848	26	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	-2266	-6	combination_of_known_junctions	FALSE	canonical	2	20	junction_7	86.3759225710499	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75936834	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758
ES.12115.73	chr15	-	5389	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	46	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	80.377964286595	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941557	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938452_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.76	chr15	-	1321	8	NNC	ENSMUSG00000022568.18	novel	3071	22	NA	NA	-216	-6	intron_retention	FALSE	canonical	1	4	junction_6	154.432998482864	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	8430	False	NA	-7	True	AATAAA	-15	NA	75921356	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920867_75920943_75921051
ES.12115.79	chr15	-	7182	32	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	-6	-6	intron_retention	FALSE	canonical	2	20	junction_6	94.7834159635923	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941609	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.8	chr15	-	6590	34	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_22	82.5493368908575	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941582	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75936451_75936583_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.80	chr15	-	5443	36	NNC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_24	74.8375328730886	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941621	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936442_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.84	chr15	-	5550	38	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	21	-6	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	118.142236395173	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941582	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919770_75919846_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.85	chr15	-	5655	35	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	18	-6	intron_retention	FALSE	canonical	3	14	junction_28	98.6561827132149	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941585	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936677_75936758_75936926_75936998_75937199_75937938_75938053_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.87	chr15	-	5485	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	97.2465802819987	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941588	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933633_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.89	chr15	-	5579	38	FSM	ENSMUSG00000022568.18	ENSMUST00000002603.12	5599	38	14	6	14	-6	multi-exon	FALSE	canonical	2	7	junction_2	107.737208348925	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941589	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75919387_75919469_75919522_75919770_75919846_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.9	chr15	-	5476	35	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	43	0	intron_retention	FALSE	canonical	2	20	junction_7	93.2214361569781	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941560	75919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.91	chr15	-	5710	34	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	296	-6	intron_retention	FALSE	canonical	3	271	junction_28	48.436737493628	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941307	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.92	chr15	-	3246	23	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-130	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	141.157522934457	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75934698	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932421_75932494_75932982_75933073_75933587_75933641_75934514
ES.12115.93	chr15	-	5044	33	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	39	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.6547175215473	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	False	NA	-7	True	AATAAA	-15	NA	75941564	75919012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919538_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.94	chr15	-	4154	28	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	-2578	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	110.171919525131	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75937146	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936583_75936677_75936758_75936926_75936998
ES.12115.95	chr15	-	6366	34	NIC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	49	-7	intron_retention	FALSE	canonical	2	20	junction_7	78.6105697171699	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941554	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920921_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.97	chr15	-	5380	36	NNC	ENSMUSG00000022568.18	novel	5440	36	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	80.4003452119708	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	75941571	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931167_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ES.12115.98	chr15	-	2018	7	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	275	-7	intron_retention	FALSE	canonical	3	289	junction_6	61.4997741639937	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTCTCTTGTCCTTTTG	7580	False	NA	-8	True	AATAAA	-14	NA	75922206	75919013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75919387_75919469_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898
ES.12116.1	chr15	+	2297	1	Antisense	novelGene_ENSMUSG00000002524.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCAGGTTGGCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	75952490	75954787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_75952500_75954800
ES.12117.1	chr15	-	1911	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	1	-31	0	31	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTGTGTGTGGAAT	NA	False	NA	31	True	NA	NA	NA	75952761	75941999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.10	chr15	-	1615	10	NNC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	572.203365385092	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	-6	True	CATAAA	-19	NA	75952747	75942036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949549_75952698
ES.12117.11	chr15	-	4115	9	NIC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	-2	2	intron_retention	FALSE	canonical	3	334	junction_5	377.79390462923	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	-6	True	CATAAA	-19	NA	75952733	75942036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943803_75944081_75944175_75944255_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.12	chr15	-	1846	11	NNC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	434.967596494268	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	-6	True	CATAAA	-19	NA	75952757	75942036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944445_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.13	chr15	-	1225	3	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	-558	2	intron_retention	FALSE	canonical	3	15	junction_2	788.5	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	-6	True	CATAAA	-19	NA	75943804	75942036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75943167_75943588
ES.12117.14	chr15	-	4989	9	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	-4	2	intron_retention	FALSE	canonical	3	1167	junction_8	124.557153046302	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTCCCTGTGTCTGA	NA	False	NA	-6	True	CATAAA	-19	NA	75952757	75942036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.15	chr15	-	1842	12	NNC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	561.021603567475	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAAGTCCCTGTGTCTG	NA	False	NA	-7	True	CATAAA	-18	NA	75952757	75942037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943615_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.17	chr15	-	4150	11	NNC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	248	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	435.809545558608	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAAGTCCCTGTGTCTG	NA	False	NA	-7	True	CATAAA	-18	NA	75952471	75942037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75950080
ES.12117.18	chr15	-	4794	10	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	1167	junction_9	124.716369573149	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAAGTCCCTGTGTCTG	NA	False	NA	-7	True	CATAAA	-18	NA	75952760	75942037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.19	chr15	-	1785	11	NNC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	436.584573708234	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952752	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943615_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.2	chr15	-	5327	6	NNC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	27	intron_retention	FALSE	canonical	3	121	junction_5	537.396315580969	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAAGCTGGTTGTGTGTG	NA	False	NA	27	True	NA	NA	NA	75952753	75942003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75943803_75944081_75947481_75947585_75947682_75949449_75949549_75952698
ES.12117.20	chr15	-	5333	6	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1167	junction_5	107.343560589353	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952753	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75943506_75943588_75943803_75944081_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.21	chr15	-	5876	7	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	-626	0	intron_retention	FALSE	canonical	3	1305	junction_3	87.7192491227933	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75950465	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943803_75944081_75944175_75944255_75947481_75947585_75947682_75949449
ES.12117.24	chr15	-	3006	10	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	62	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	594.437923121031	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952657	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75951218
ES.12117.25	chr15	-	3992	10	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	334	junction_6	358.133156835124	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952760	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943803_75944081_75944175_75944255_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.27	chr15	-	4012	10	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	334	junction_7	353.176205453829	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952758	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75946507_75947390_75947682_75949449_75949552_75952698
ES.12117.28	chr15	-	4964	10	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	4	0	-4	0	intron_retention	FALSE	canonical	3	1143	junction_7	129.744287916322	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952757	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449
ES.12117.29	chr15	-	2021	9	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1143	junction_5	151.353064058842	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952730	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.3	chr15	-	1884	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	-57	-6	-45	-2	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	False	NA	-2	True	CATAAA	-23	NA	75952818	75942032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.30	chr15	-	1650	11	NIC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	576.040632247414	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952730	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.31	chr15	-	3134	11	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	268	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	434.658532643729	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952451	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75951075
ES.12117.32	chr15	-	3490	1	FSM	ENSMUSG00000002524.18	ENSMUST00000227251.2	429	1	-2282	-779	-2282	0	mono-exon	FALSE	NA	NA	NA	NA	NA	648	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75945528	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75942000_75945500
ES.12117.33	chr15	-	7278	8	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	334	junction_5	401.272211541121	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952751	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943803_75944081_75944175_75944255_75946507_75947390_75947481_75947585_75947682_75949449
ES.12117.34	chr15	-	7026	10	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	334	junction_7	355.69368844555	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952730	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75946507_75947390_75947481_75947585_75947682_75949449
ES.12117.35	chr15	-	3906	11	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	334	junction_7	339.922344072878	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952757	75942038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.36	chr15	-	3820	9	NIC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	3	-1	intron_retention	FALSE	canonical	3	15	junction_3	553.204980093274	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGAAGTCCCTGTGTC	NA	False	NA	-9	True	CATAAA	-16	NA	75952758	75942039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75946507_75947390_75947682_75949449_75949552_75952698
ES.12117.39	chr15	-	5194	8	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1143	junction_5	136.632383289121	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGAAGTCCCTGTGT	NA	False	NA	-10	True	CATAAA	-15	NA	75952758	75942040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449
ES.12117.40	chr15	-	3664	4	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	2617	-2	intron_retention	FALSE	canonical	3	1305	junction_2	117.167496440874	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGAAGTCCCTGTGT	NA	False	NA	-10	True	CATAAA	-15	NA	75946185	75942040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75943803_75944081_75944175_75944255
ES.12117.6	chr15	-	6515	9	NIC	ENSMUSG00000002524.18	novel	1825	11	NA	NA	5	-2	intron_retention	FALSE	canonical	2	4	junction_8	478.626142594614	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	False	NA	-2	True	CATAAA	-23	NA	75952748	75942032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75947682_75949449_75949552_75951075
ES.12117.7	chr15	-	1968	13	NNC	ENSMUSG00000002524.18	novel	1881	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	616.381302216592	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	False	NA	-2	True	CATAAA	-23	NA	75952751	75942032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75951075_75951176_75952698
ES.12117.8	chr15	-	4577	9	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	15	junction_3	478.885946755592	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCCCTGTGTCTGAAA	NA	False	NA	-4	True	CATAAA	-21	NA	75952731	75942034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75947481_75947585_75947682_75949449_75949552_75952698
ES.12117.9	chr15	-	2223	8	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1143	junction_4	152.546814493928	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCCCTGTGTCTGAAA	NA	False	NA	-4	True	CATAAA	-21	NA	75952731	75942034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75942477_75942597_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ES.12118.1	chr15	-	3234	18	FSM	ENSMUSG00000075590.5	ENSMUST00000228366.3	3192	18	-113	71	-113	5	multi-exon	FALSE	canonical	0	0	junction_3	2.12091251497882	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTGACATAGTTTAT	NA	False	NA	6	True	AATAAA	-21	NA	75963589	75957437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962136_75962301_75962392_75962486_75962589_75962656_75962780_75963219
ES.12118.2	chr15	-	3384	17	NIC	ENSMUSG00000075590.5	novel	3192	18	NA	NA	-100	2	intron_retention	FALSE	canonical	0	0	junction_3	2.06155281280883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTCTGACATAGTT	NA	False	NA	3	True	AATAAA	-18	NA	75963576	75957440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962392_75962486_75962589_75962656_75962780_75963219
ES.12118.3	chr15	-	4458	9	NIC	ENSMUSG00000075590.5	novel	3220	17	NA	NA	-97	0	intron_retention	FALSE	canonical	0	0	junction_2	1.96452920568771	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATGGTCTGACATAG	NA	False	NA	1	True	AATAAA	-44	NA	75963573	75957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75958994_75959079_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960847_75961285_75961382_75961458_75961996_75962094
ES.12118.4	chr15	-	3108	15	NNC	ENSMUSG00000075590.5	novel	3192	18	NA	NA	-98	0	intron_retention	FALSE	canonical	0	0	junction_3	2.08615455235861	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATGGTCTGACATAG	NA	False	NA	1	True	AATAAA	-44	NA	75963574	75957442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962392_75962486_75962780_75963426
ES.12118.5	chr15	-	3473	16	NIC	ENSMUSG00000075590.5	novel	3220	17	NA	NA	-97	0	intron_retention	FALSE	canonical	0	0	junction_3	2.12916258968951	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGCATGGTCTGACATA	NA	False	NA	0	True	AATAAA	-43	NA	75963573	75957443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962589_75962656_75962780_75963219
ES.12118.6	chr15	-	3823	9	NIC	ENSMUSG00000075590.5	novel	2495	12	NA	NA	301	0	intron_retention	FALSE	canonical	0	0	junction_3	1.96452920568771	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGCATGGTCTGACATA	NA	False	NA	0	True	AATAAA	-43	NA	75962926	75957443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960847_75961285_75961382_75961458
ES.12119.1	chr15	-	10584	2	NNC	ENSMUSG00000118671.1	novel	12332	3	NA	NA	12770	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGCTGTCGCCTGT	NA	False	NA	4	True	AATAAA	-28	NA	75991625	75973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75982384_75990099
ES.12119.2	chr15	-	12663	2	NNC	ENSMUSG00000118671.1	novel	12332	3	NA	NA	16855	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGACTCATTTGCTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	75987540	75973336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75985786_75987326
ES.12119.3	chr15	-	15908	3	NNC	ENSMUSG00000118671.1	novel	12332	3	NA	NA	1042	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGACTCATTTGCTCT	9824	False	NA	-8	True	AATAAA	-16	NA	76003353	75973337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_75974425_75982149_75996926_76003308
ES.1212.1	chr1	+	502	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	-21	7	-13	-7	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTTGGTTTGATTT	NA	False	NA	8	True	AATAAA	-9	NA	120048903	120115912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ES.1212.2	chr1	+	528	6	NNC	ENSMUSG00000026388.16	novel	488	6	NA	NA	-9	3217	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	18.5515498004884	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCACTTGCTGAGCATG	NA	False	NA	NA	False	AATAAA	-22	NA	120048907	120104513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120104341
ES.1212.3	chr1	+	1576	1	NIC	ENSMUSG00000026388.16	novel	488	6	NA	NA	10939	-572	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTCAGTGAGATAT	NA	False	NA	NA	False	ATTAAA	-17	NA	120099148	120100724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_120099100_120100700
ES.12120.1	chr15	+	169	1	Intergenic	novelGene_10142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	627	False	NA	NA	False	NA	NA	NA	76017313	76017482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76017300_76017500
ES.12121.1	chr15	-	176	1	Intergenic	novelGene_10143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTAATTATAG	NA	False	NA	NA	False	NA	NA	NA	76033062	76032886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76032900_76033100
ES.12122.1	chr15	+	3317	1	Intergenic	novelGene_10144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	76105512	76108829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76105500_76108800
ES.12123.1	chr15	+	166	1	Intergenic	novelGene_10146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGGGCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	76111538	76111704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76111500_76111700
ES.12124.1	chr15	-	5193	31	NNC	ENSMUSG00000022565.16	novel	3075	21	NA	NA	14	16218	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	13.3183665998834	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAAGGAAA	1042	False	NA	NA	False	NA	NA	NA	76079896	76038955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76039953_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
ES.12124.10	chr15	-	11670	32	NIC	ENSMUSG00000022565.16	novel	14972	34	NA	NA	-346	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_31	14.6390494565267	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	9424	False	NA	-7	True	AATAAA	-18	NA	76117120	76055173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76115373_76115579_76116990
ES.12124.11	chr15	-	11886	32	NNC	ENSMUSG00000022565.16	novel	14972	34	NA	NA	-334	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.8429166546841	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	9436	False	NA	-7	True	AATAAA	-18	NA	76117108	76055173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76115373_76115579_76116762
ES.12124.12	chr15	-	13284	22	NNC	ENSMUSG00000022565.16	novel	14917	32	NA	NA	-2154	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9284112740187	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	6541	False	NA	-7	True	AATAAA	-18	NA	76074397	76055173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76057275_76057651_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301
ES.12124.16	chr15	-	14967	33	NIC	ENSMUSG00000022565.16	novel	14972	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_32	15.5180086915171	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGTCTTGCCTTGTGC	9770	False	NA	-8	True	AATAAA	-17	NA	76116774	76055174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76115373_76115579_76116727
ES.12124.17	chr15	-	8020	2	NNC	ENSMUSG00000022565.16	novel	14855	32	NA	NA	7378	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGTCTTGCCTTGTGC	6701	False	NA	-8	True	AATAAA	-17	NA	76064865	76055174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76062334_76064004
ES.12124.18	chr15	-	11551	31	NIC	ENSMUSG00000022565.16	novel	14944	32	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	12.6213663637852	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGGTCTTGCCTTGTG	9315	False	NA	-9	True	AATAAA	-16	NA	76082397	76055175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76082179
ES.12124.19	chr15	-	11651	32	NNC	ENSMUSG00000022565.16	novel	14972	34	NA	NA	-343	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.8429166546841	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGGGTCTTGCCTTGT	9427	False	NA	-10	True	AATAAA	-15	NA	76117117	76055176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76115373_76115579_76117003
ES.12124.2	chr15	-	4575	31	NNC	ENSMUSG00000022565.16	novel	3075	21	NA	NA	14	15600	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.3183665998834	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTGTTTTATTCAAG	1042	False	NA	NA	False	ATTAAA	-45	NA	76079896	76039573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76039953_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
ES.12124.20	chr15	-	176	1	Intergenic	novelGene_10145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	76107663	76107487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76107500_76107700
ES.12124.3	chr15	-	4234	31	NNC	ENSMUSG00000022565.16	novel	3075	21	NA	NA	-37	15355	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.8407209189245	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTGCGTTTCGTGTGTG	5570	False	NA	NA	False	NA	NA	NA	76113734	76039818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76039953_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
ES.12124.4	chr15	-	4387	32	Fusion	ENSMUSG00000022565.16_ENSMUSG00000063268.13	novel	3075	21	NA	NA	-346	15354	multi-exon	FALSE	canonical	0	0	junction_1	16.7155301744051	264	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTGCGTTTCGTGTGT	9424	False	NA	NA	False	NA	NA	NA	76117120	76039819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_76039949_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76115373_76115579_76116990
ES.12124.6	chr15	-	11481	31	NIC	ENSMUSG00000022565.16	novel	14917	32	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_30	10.2402256919573	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	NA	False	NA	-7	True	AATAAA	-18	NA	76093310	76055173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76093164
ES.12124.8	chr15	-	11514	31	NIC	ENSMUSG00000022565.16	novel	14855	32	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_30	11.3943943332773	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	5568	False	NA	-7	True	AATAAA	-18	NA	76113736	76055173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
ES.12125.1	chr15	-	3282	11	FSM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	3	-1	3	1	multi-exon	FALSE	canonical	1	1	junction_2	1.74355957741627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAAGGACCGGCTGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	76127638	76117201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
ES.12125.2	chr15	-	4176	9	ISM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	-18	5393	-18	-4657	5prime_fragment	FALSE	canonical	1	1	junction_1	1.85404962177392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGAGTTGTCACTGTGT	NA	False	NA	NA	False	NA	NA	NA	76127659	76122595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
ES.12126.1	chr15	+	1758	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	-25	-8	-14	8	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTGTCTCTCTTCAC	NA	False	NA	21	True	AATAAA	-22	NA	76130949	76134112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ES.12126.2	chr15	+	1961	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-11	3	intron_retention	FALSE	canonical	3	13	junction_1	29.8533452434099	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTCTCCTTGTCTCTC	NA	False	NA	16	True	AATAAA	-17	NA	76130952	76134107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76131101_76131839_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ES.12126.3	chr15	+	1863	6	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-3	2	intron_retention	FALSE	canonical	3	70	junction_1	10.9799817850486	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTCTCCTTGTCTCT	NA	False	NA	15	True	AATAAA	-16	NA	76130960	76134106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76133101_76133177_76133322_76133416
ES.12126.4	chr15	+	1923	5	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	5	1	intron_retention	FALSE	canonical	3	70	junction_1	11.9791485507109	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTCTCCTTGTCTC	NA	False	NA	14	True	AATAAA	-15	NA	76130979	76134105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76131101_76132050_76132378_76132458_76133101_76133177_76133322_76133416
ES.12126.5	chr15	+	1609	7	NNC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	-282	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.6093275802284	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTCCTTGTCTCTCTT	NA	False	NA	18	True	AATAAA	-19	NA	76131981	76134109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76132118_76132181_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ES.12127.1	chr15	+	177	1	Intergenic	novelGene_10147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	76162525	76162702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76162500_76162700
ES.12128.1	chr15	+	190	1	Intergenic	novelGene_10150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATCAGAAAAAAAA	21	False	NA	NA	False	NA	NA	NA	76210738	76210928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76210700_76210900
ES.12129.1	chr15	+	872	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	11	913	11	669	multi-exon	FALSE	canonical	0	0	junction_1	330.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTACTGTACAGCACTTA	890	False	NA	17	True	AATAAA	-23	NA	76211607	76213964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76211864_76213229_76213437_76213555
ES.12129.10	chr15	+	2291	1	NIC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	7	667	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTACTGTACAGCACT	954	False	NA	15	True	AATAAA	-21	NA	76211671	76213962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76211700_76214000
ES.12129.11	chr15	+	3196	1	NIC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	13	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGGACTAATGTCTT	960	False	NA	4	True	NA	NA	NA	76211677	76214873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76211700_76214900
ES.12129.2	chr15	+	1766	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	30	0	30	0	multi-exon	FALSE	canonical	0	0	junction_1	330.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTAATGTCTTCTTT	909	False	NA	8	True	NA	NA	NA	76211626	76214877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76211864_76213229_76213437_76213555
ES.12129.3	chr15	+	940	2	ISM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	54	921	-14	661	intron_retention	FALSE	canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGTACACCTTACTGTAC	933	False	NA	9	True	AATAAA	-15	NA	76211650	76213956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76211864_76213229
ES.12129.4	chr15	+	2184	2	NIC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	-8	664	intron_retention	FALSE	canonical	3	661	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACACCTTACTGTACAGC	939	False	NA	12	True	AATAAA	-18	NA	76211656	76213959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76213437_76213555
ES.12129.5	chr15	+	1298	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTAATGTCTTCTTT	941	False	NA	8	True	NA	NA	NA	76211658	76214877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76211864_76213229_76213343_76213897
ES.12129.8	chr15	+	1840	2	ISM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	71	4	3	0	intron_retention	FALSE	canonical	0	0	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGGACTAATGTCTT	950	False	NA	4	True	NA	NA	NA	76211667	76214873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76211864_76213229
ES.12129.9	chr15	+	3094	2	NIC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	3	3	intron_retention	FALSE	canonical	3	661	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAATGTCTTCTTTCCT	950	False	NA	11	True	NA	NA	NA	76211667	76214880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76213437_76213555
ES.1213.1	chr1	-	1812	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAACTTTTCCCCAGTC	NA	False	NA	NA	False	NA	NA	NA	120051676	120049864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120049900_120051700
ES.12130.10	chr15	-	3934	26	NNC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	514	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.47112743381895	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTATTGGGTTATTGGG	9841	False	NA	-20	True	AATAAA	-16	NA	76190787	76180803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185643_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76190060_76190398_76190591_76190674
ES.12130.12	chr15	-	4009	27	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	7.90850040767685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTATTGGGTTATTGGG	9163	False	NA	-20	True	AATAAA	-16	NA	76191465	76180803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190919_76191427
ES.12130.13	chr15	-	2787	6	NIC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	1202	-2	intron_retention	FALSE	canonical	3	11	junction_5	7.33757453113766	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTATTGGGTTATTGG	6194	False	NA	-21	True	AATAAA	-15	NA	76184113	76180804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182483_76182586
ES.12130.14	chr15	-	7062	21	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-32	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	9.44391338376205	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTATTGGGTTATTGG	9151	False	NA	-21	True	AATAAA	-15	NA	76191477	76180804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181816_76181969_76182105_76182241_76182335_76184152_76184267_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187749_76188286_76188553_76188665_76188734_76188833_76189536_76189647_76189772_76189860_76190591_76190674_76190899_76191427
ES.12130.15	chr15	-	5460	26	NNC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	-842	-2	intron_retention	FALSE	canonical	0	0	junction_11	8.47112743381895	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTATTGGGTTATTGG	7470	False	NA	-21	True	AATAAA	-15	NA	76194797	76180804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185643_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76190591_76190674_76190899_76193720
ES.12130.16	chr15	-	2585	18	NIC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	-1767	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	8.15337406541114	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTATTGGGTTATTGG	9263	False	NA	-21	True	AATAAA	-15	NA	76189167	76180804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092
ES.12130.17	chr15	-	5482	22	NIC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	-20	-3	intron_retention	FALSE	canonical	2	9	junction_19	7.04118110067601	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTATTGGGTTATTG	9163	False	NA	-22	True	AATAAA	-14	NA	76191465	76180805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
ES.12130.18	chr15	-	208	1	Intergenic	novelGene_10148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTAACCATACTCACTG	9516	False	NA	NA	False	NA	NA	NA	76199575	76199367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76199400_76199600
ES.12130.19	chr15	-	181	1	Intergenic	novelGene_10149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAATCTTGAAAAAAGAAA	8593	False	NA	NA	False	NA	NA	NA	76200498	76200317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76200300_76200500
ES.12130.2	chr15	-	4097	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	-127	0	17	0	multi-exon	FALSE	canonical	2	7	junction_11	7.05305339056621	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9056	False	NA	-19	True	AATAAA	-17	NA	76191572	76180802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
ES.12130.20	chr15	-	2956	1	Antisense	novelGene_ENSMUSG00000034259.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGCAGAGGGCCCACT	NA	False	NA	NA	False	NA	NA	NA	76215386	76212430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76212400_76215400
ES.12130.21	chr15	-	2816	2	Antisense	novelGene_ENSMUSG00000034259.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGCAGAGGGCCCACT	NA	False	NA	NA	False	NA	NA	NA	76215363	76212430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76213442_76213558
ES.12130.3	chr15	-	4011	27	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.90850040767685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9151	False	NA	-19	True	AATAAA	-17	NA	76191477	76180802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185016_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
ES.12130.5	chr15	-	3986	27	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	8.38955394431762	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9164	False	NA	-19	True	AATAAA	-17	NA	76191464	76180802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181816_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185643_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
ES.12130.7	chr15	-	4589	25	NIC	ENSMUSG00000022562.16	novel	4081	27	NA	NA	1	-1	intron_retention	FALSE	canonical	2	7	junction_10	7.20520163184595	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTATTGGGTTATTGGG	9184	False	NA	-20	True	AATAAA	-16	NA	76191444	76180803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
ES.12130.8	chr15	-	3987	27	NNC	ENSMUSG00000022562.16	novel	3970	27	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	7.90850040767685	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTATTGGGTTATTGGG	9160	False	NA	-20	True	AATAAA	-16	NA	76191468	76180803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190890_76191423
ES.12131.1	chr15	+	2329	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-11	-1	intron_retention	TRUE	non_canonical	3	197	junction_5	31.0741049750431	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGGCCCGCTGTCTTC	4702	False	NA	23	True	AATAAA	-26	NA	76215419	76219106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.10	chr15	+	2918	8	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	-34	1	intron_retention	FALSE	canonical	3	245	junction_1	18.8376522650022	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4792	False	NA	16	True	AATAAA	-19	NA	76215509	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.11	chr15	+	2732	9	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	-26	0	intron_retention	FALSE	non_canonical	3	245	junction_1	17.6984286025624	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATCCTGGCCCG	4800	False	NA	15	True	AATAAA	-18	NA	76215517	76219098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.12	chr15	+	1928	12	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-25	1	combination_of_known_junctions	FALSE	non_canonical	3	5	junction_6	82.1439977334702	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4801	False	NA	16	True	AATAAA	-19	NA	76215518	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217217_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.13	chr15	+	2563	8	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-20	1	intron_retention	FALSE	canonical	3	245	junction_2	21.9591457400477	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4806	False	NA	16	True	AATAAA	-19	NA	76215523	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.16	chr15	+	2432	11	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	-14	1	intron_retention	FALSE	non_canonical	3	197	junction_5	30.9497980607305	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4812	False	NA	16	True	AATAAA	-19	NA	76215529	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.17	chr15	+	2385	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-10	1	intron_retention	FALSE	canonical	3	197	junction_5	32.7549826574353	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4816	False	NA	16	True	AATAAA	-19	NA	76215533	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.18	chr15	+	1946	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_6	81.5863381854609	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4824	False	NA	16	True	AATAAA	-19	NA	76215541	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217418_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.19	chr15	+	2594	7	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	33	1	intron_retention	FALSE	canonical	3	245	junction_2	20.5865382120345	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4865	False	NA	16	True	AATAAA	-19	NA	76215582	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.2	chr15	+	2105	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	2	0	2	0	multi-exon	FALSE	non_canonical	3	197	junction_6	31.5777932223483	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4715	False	NA	24	True	AATAAA	-27	NA	76215432	76219107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.20	chr15	+	2488	10	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	-27	1	intron_retention	FALSE	non_canonical	3	197	junction_4	29.7508169822462	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4968	False	NA	16	True	AATAAA	-19	NA	76215685	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.21	chr15	+	2611	8	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	16	0	intron_retention	FALSE	non_canonical	3	245	junction_1	17.0353773551587	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATCCTGGCCCG	5011	False	NA	15	True	AATAAA	-18	NA	76215728	76219098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216832_76216909_76217012_76217102_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.22	chr15	+	658	2	ISM	ENSMUSG00000022561.14	ENSMUST00000165179.2	360	3	433	-608	433	-1	3prime_fragment	FALSE	canonical	3	300	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGGCCCGCTGTCTTC	7646	False	NA	23	True	AATAAA	-26	NA	76218363	76219106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76218405_76218489
ES.12131.3	chr15	+	2165	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	11	1	intron_retention	FALSE	non_canonical	3	245	junction_2	20.9035882087263	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4724	False	NA	16	True	AATAAA	-19	NA	76215441	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.4	chr15	+	3102	7	NIC	ENSMUSG00000022561.14	novel	2237	12	NA	NA	18	1	intron_retention	FALSE	canonical	3	245	junction_1	19.7603699920377	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4731	False	NA	16	True	AATAAA	-19	NA	76215448	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76218405_76218489_76218661_76218781
ES.12131.5	chr15	+	2356	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	32	1	intron_retention	FALSE	non_canonical	3	245	junction_2	19.9208309609022	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4745	False	NA	16	True	AATAAA	-19	NA	76215462	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.8	chr15	+	2212	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-49	1	intron_retention	FALSE	canonical	3	197	junction_6	33.0992447043735	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGATCCTGGCCCGC	4777	False	NA	16	True	AATAAA	-19	NA	76215494	76219099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
ES.12131.9	chr15	+	2022	12	NNC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_6	83.2600228498568	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATCCTGGCCCG	4783	False	NA	15	True	AATAAA	-18	NA	76215500	76219098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217382_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ES.12132.1	chr15	+	166	1	Intergenic	novelGene_10151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGGCAGCACCAAGT	NA	False	NA	NA	False	NA	NA	NA	76227049	76227215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76227000_76227200
ES.12132.2	chr15	+	487	1	Intergenic	novelGene_10152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	76227051	76227538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76227100_76227500
ES.12133.1	chr15	+	1274	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	-30	276	-30	52	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATATTTCTCCACATT	NA	False	NA	77	True	ACTAAA	-24	NA	76227692	76230184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.10	chr15	+	1175	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1738.60649819203	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227732	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229863
ES.12133.11	chr15	+	1261	6	ISM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	326	0	2	intron_retention	FALSE	canonical	3	4240	junction_5	279.117466311229	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227732	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676
ES.12133.12	chr15	+	1870	5	NNC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_2	2018.59908104606	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227733	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76228699_76228781_76228910_76229011_76229170_76229252_76229414_76229676
ES.12133.13	chr15	+	936	4	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	1	2	intron_retention	FALSE	canonical	1	42	junction_1	2196.99082079709	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227733	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76227893_76229011_76229170_76229252_76229414_76229676
ES.12133.16	chr15	+	1817	6	NNC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_2	1875.54115923911	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227733	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76228699_76228781_76228909_76228986_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.17	chr15	+	1511	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	11	-2	1	2	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATGGTGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	76227733	76230462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.18	chr15	+	2057	5	NIC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	1	4	intron_retention	FALSE	canonical	3	4463	junction_2	228.973251712946	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAGCTGGTCAATGA	NA	False	NA	29	True	AATAAA	-19	NA	76227733	76230136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229778_76229854
ES.12133.19	chr15	+	1094	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1757.07616985339	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227733	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227893_76228501_76228699_76228781_76228918_76229109_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.2	chr15	+	1132	8	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1639.04697296686	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227713	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229053_76229123_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.20	chr15	+	1208	7	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	1700.84897102071	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGCTGGTCAATGACT	NA	False	NA	31	True	AATAAA	-21	NA	76227734	76230138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76227893_76228479_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.21	chr15	+	1950	4	NIC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	3	2	intron_retention	FALSE	canonical	3	4240	junction_3	344.811381611583	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227735	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76228909_76229011_76229170_76229252_76229414_76229676
ES.12133.23	chr15	+	1276	6	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	7	2	intron_retention	FALSE	canonical	3	92	junction_1	1813.16701933385	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227739	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76227893_76228479_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676
ES.12133.25	chr15	+	1834	4	NNC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	10	2	intron_retention	FALSE	canonical	0	0	junction_2	2053.33598484677	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227742	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76228909_76229011_76229170_76229361_76229414_76229676
ES.12133.26	chr15	+	2180	5	ISM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	10	-322	10	-6	intron_retention	FALSE	canonical	3	4240	junction_4	299.269422928571	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGCACCCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	76227742	76230454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676
ES.12133.27	chr15	+	1361	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1732.55559474693	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227746	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227893_76228310_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.29	chr15	+	1282	7	NIC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	-32	2	combination_of_known_splicesites	TRUE	canonical	1	83	junction_1	1704.16650366747	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227966	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76228225_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.3	chr15	+	1851	6	FSM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	-17	-43	-7	43	multi-exon	FALSE	canonical	3	4240	junction_4	274.648866737149	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCTGGAACCCATATTT	NA	False	NA	68	True	ACTAAA	-15	NA	76227715	76230175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.30	chr15	+	786	4	ISM	ENSMUSG00000022551.9	ENSMUST00000229292.2	563	6	250	-139	250	2	3prime_fragment	FALSE	canonical	3	4240	junction_2	335.690664484764	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76228925	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.4	chr15	+	998	6	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	1861.38696675356	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227721	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76227893_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.5	chr15	+	1031	6	NNC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1868.90528384934	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTAGCTGGTCAATG	NA	False	NA	28	True	AATAAA	-18	NA	76227723	76230135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227902_76228756_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.7	chr15	+	1136	7	NNC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_2	1653.74299360236	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227729	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76227893_76228501_76228699_76228832_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12133.9	chr15	+	862	5	NIC	ENSMUSG00000022551.9	novel	1520	7	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	1	42	junction_1	2027.24554506848	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTAGCTGGTCAAT	NA	False	NA	27	True	AATAAA	-17	NA	76227730	76230134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76227893_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ES.12134.1	chr15	+	1778	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	-91	-1	-79	1	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAACCTGGGAGTTTGTG	NA	False	NA	25	True	AATAAA	-17	NA	76235414	76238574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.10	chr15	+	2437	7	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	633	junction_2	18.2094297915485	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235513	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.12	chr15	+	3051	1	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	-5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235521	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235500_76238600
ES.12134.13	chr15	+	2292	6	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	-5	1	intron_retention	FALSE	canonical	3	22	junction_1	259.839642856897	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAACCTGGGAGTTTGTG	NA	False	NA	25	True	AATAAA	-17	NA	76235521	76238574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235860_76236195_76236753_76236845_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.14	chr15	+	1740	7	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	425	junction_1	93.4476977898451	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235522	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235860_76236619_76236753_76236845_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.15	chr15	+	2391	7	NNC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	247.825207219389	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235525	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76236753_76236845_76236975_76237046_76237213_76237371_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.16	chr15	+	2712	4	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	659	junction_3	11.5181016954473	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235529	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76237213_76237337_76237460_76237540_76237661_76237785
ES.12134.19	chr15	+	1644	8	NNC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	234.75197506287	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATGGAACCTGGGAGTT	NA	False	NA	21	True	AATAAA	-13	NA	76235537	76238570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237453_76237540_76237661_76237785_76237921_76238046
ES.12134.2	chr15	+	1776	7	ISM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	1	0	0	intron_retention	FALSE	canonical	3	203	junction_1	172.683396872877	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235493	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785
ES.12134.20	chr15	+	2466	6	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	659	junction_4	10.5943381105192	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235556	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76236753_76236845_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.3	chr15	+	1656	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	-5	0	-2	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGGAGTTTGTGGGGG	NA	False	NA	29	True	AATAAA	-21	NA	76235493	76238578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.5	chr15	+	1397	8	NNC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.183950024291	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAACCTGGGAGTTT	NA	False	NA	22	True	AATAAA	-14	NA	76235511	76238571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76235579_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.6	chr15	+	1704	7	NIC	ENSMUSG00000022553.17	novel	1651	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	203	junction_1	175.946409138945	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235511	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235860_76236666_76236753_76236845_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.7	chr15	+	1730	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	18	-5	3	-3	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGGGAGTTTGTGGGG	NA	False	NA	28	True	AATAAA	-20	NA	76235511	76238577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.8	chr15	+	1966	9	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	284.763031966932	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235512	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235860_76236195_76236484_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12134.9	chr15	+	2174	7	NIC	ENSMUSG00000022553.17	novel	1743	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	22	junction_1	243.327397187867	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235512	76238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76235860_76236195_76236753_76236845_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ES.12135.1	chr15	-	1969	8	ISM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	17	-1	16	1	intron_retention	FALSE	canonical	3	126	junction_7	14.7717325196692	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTCTGTTCTTGGAT	8130	False	NA	-2	True	ATTAAA	-17	NA	76235294	76231238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254
ES.12135.10	chr15	-	3330	5	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	138	junction_4	11.5839328382031	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8528	False	NA	-4	True	ATTAAA	-15	NA	76234896	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231588_76231681_76232018_76232095_76232205_76232285_76232428_76232500
ES.12135.11	chr15	-	1245	7	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	18	junction_6	50.1112650896871	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8520	False	NA	-4	True	ATTAAA	-15	NA	76234904	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
ES.12135.12	chr15	-	1174	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8497	False	NA	-4	True	ATTAAA	-15	NA	76234927	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
ES.12135.13	chr15	-	3837	4	NIC	ENSMUSG00000022552.17	novel	1669	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	138	junction_3	13.1993265821489	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8099	False	NA	-4	True	ATTAAA	-15	NA	76235325	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231588_76231681_76232205_76232285_76232428_76232500
ES.12135.14	chr15	-	1855	7	NNC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_6	57.5200448153125	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGTTCTGTTCTTG	8139	False	NA	-5	True	ATTAAA	-14	NA	76235285	76231241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234429
ES.12135.15	chr15	-	3213	4	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	135	junction_3	14.3372087784044	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGTTCTGTTCTTG	8544	False	NA	-5	True	ATTAAA	-14	NA	76234880	76231241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231588_76231681_76232205_76232285_76234430_76234680
ES.12135.16	chr15	-	3807	4	NNC	ENSMUSG00000022552.17	novel	1669	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	3	junction_3	70.8001883236667	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTGTTCTGTTCTTG	8146	False	NA	-5	True	ATTAAA	-14	NA	76235278	76231241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76231386_76231458_76232205_76232285_76232425_76232500
ES.12135.18	chr15	-	2549	8	NIC	ENSMUSG00000022552.17	novel	1905	8	NA	NA	-577	-2	intron_retention	FALSE	canonical	2	7	junction_4	49.464891693039	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGTGTTCTGTTCTT	7536	False	NA	-6	True	ATTAAA	-13	NA	76235888	76231242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232008_76232095_76232205_76232285_76232428_76232500_76232636_76234254
ES.12135.19	chr15	-	3647	6	ISM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	26	4	-10	-3	intron_retention	FALSE	canonical	3	127	junction_1	14.1619207736804	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTGTGTTCTGTTCT	8139	False	NA	-7	True	ATTAAA	-12	NA	76235285	76231243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285
ES.12135.2	chr15	-	3534	3	NIC	ENSMUSG00000022552.17	novel	1896	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	127	junction_1	21.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8497	False	NA	-3	True	ATTAAA	-16	NA	76234927	76231239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76232205_76232285
ES.12135.3	chr15	-	3763	4	ISM	ENSMUSG00000022552.17	ENSMUST00000144816.9	1669	6	25	-1	-3	0	intron_retention	FALSE	canonical	3	127	junction_1	17.5689119374726	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8174	False	NA	-3	True	ATTAAA	-16	NA	76235250	76231239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76231386_76231458_76231588_76231681_76232205_76232285
ES.12135.4	chr15	-	1778	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	126	junction_6	15.0020406775144	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8141	False	NA	-4	True	ATTAAA	-15	NA	76235283	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232636_76234254_76234430_76234680
ES.12135.5	chr15	-	1693	7	NIC	ENSMUSG00000022552.17	novel	1905	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	126	junction_6	15.0074055793206	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8482	False	NA	-4	True	ATTAAA	-15	NA	76234942	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232205_76232285_76232428_76232500_76232636_76234254
ES.12135.6	chr15	-	1049	8	NIC	ENSMUSG00000022552.17	novel	1905	8	NA	NA	478	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	50.8097692679393	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	9020	False	NA	-4	True	ATTAAA	-15	NA	76234404	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76231990_76232095_76232205_76232285_76232428_76232500_76232636_76234254
ES.12135.7	chr15	-	2282	4	NIC	ENSMUSG00000022552.17	novel	1905	8	NA	NA	15	0	intron_retention	FALSE	canonical	3	126	junction_3	20.5101600838869	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8129	False	NA	-4	True	ATTAAA	-15	NA	76235295	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76231386_76231458_76232205_76232285_76232636_76234254
ES.12135.8	chr15	-	1332	6	FSM	ENSMUSG00000022552.17	ENSMUST00000144816.9	1669	6	337	0	12	0	multi-exon	FALSE	canonical	3	18	junction_5	53.2450936706848	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8486	False	NA	-4	True	ATTAAA	-15	NA	76234938	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76231386_76231458_76231588_76231681_76232205_76232285_76232428_76232500_76232636_76234680
ES.12135.9	chr15	-	1685	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	48	1	12	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8161	False	NA	-4	True	ATTAAA	-15	NA	76235263	76231240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ES.12136.1	chr15	+	3747	20	ISM	ENSMUSG00000109179.3	ENSMUST00000208833.3	6581	24	2049	1355	2049	-1355	3prime_fragment	FALSE	canonical	0	0	junction_6	2.09999340455368	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATTGTGTATCTATAT	NA	False	NA	NA	False	NA	NA	NA	76240680	76248046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76241032_76241123_76241267_76241356_76241594_76241668_76241760_76241897_76242031_76242107_76242230_76242455_76242517_76242680_76242831_76242909_76243171_76243257_76243381_76243456_76243541_76244499_76244629_76244711_76244928_76245006_76245187_76245312_76245511_76245610_76245733_76245816_76245974_76246865_76247477_76247561_76247624_76247730
ES.12136.10	chr15	+	2407	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	8	-422	8	422	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGTAGACTAGTGTTTT	3552	False	NA	NA	False	NA	NA	NA	76253105	76256059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.11	chr15	+	1982	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	12	82	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTATGCACCCCT	3556	False	NA	NA	False	NA	NA	NA	76253109	76255719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.12	chr15	+	2210	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	21	-238	21	238	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGAGTTTGCAGTGTTC	3565	False	NA	NA	False	NA	NA	NA	76253118	76255875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.13	chr15	+	1564	6	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	22	-378	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	27.9184526791869	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCGGAGTCTTCTTGC	3566	False	NA	7	True	NA	NA	NA	76253119	76255259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76253741_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.14	chr15	+	2406	2	NIC	ENSMUSG00000022554.8	novel	611	4	NA	NA	22	-34	intron_retention	FALSE	canonical	3	106	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3566	False	NA	NA	False	NA	NA	NA	76253119	76255603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76254454_76254531
ES.12136.15	chr15	+	2308	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	22	418	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACCGTGTAGACTAGTG	3566	False	NA	NA	False	NA	NA	NA	76253119	76256055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.16	chr15	+	2144	5	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	22	-5	intron_retention	FALSE	canonical	3	37	junction_1	28.8303225788405	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCCAGACTCTCCTGC	3566	False	NA	NA	False	NA	NA	NA	76253119	76255632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76253741_76253851_76253953_76254055_76254454_76254531_76254655_76254731
ES.12136.17	chr15	+	2354	3	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	27	-4	intron_retention	FALSE	canonical	3	106	junction_1	1.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCCAGACTCTCCTGCA	3571	False	NA	NA	False	NA	NA	NA	76253124	76255633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76254454_76254531_76254655_76254731
ES.12136.18	chr15	+	1716	6	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	214	-34	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	27.9184526791869	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3758	False	NA	NA	False	NA	NA	NA	76253311	76255603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76253741_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.2	chr15	+	4640	19	NIC	ENSMUSG00000109179.3	novel	6581	24	NA	NA	2051	-1352	intron_retention	FALSE	canonical	0	0	junction_6	2.02225274702237	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTATCTATATATG	NA	False	NA	NA	False	NA	NA	NA	76240682	76248049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76241032_76241123_76241267_76241356_76241594_76241668_76241760_76241897_76242031_76242107_76242230_76242455_76242517_76242680_76242831_76242909_76243171_76243257_76243381_76243456_76243541_76244499_76244629_76244711_76244928_76245006_76245187_76245312_76245511_76245610_76245733_76245816_76247477_76247561_76247624_76247730
ES.12136.3	chr15	+	5453	12	NIC	ENSMUSG00000109179.3	novel	6581	24	NA	NA	2056	-1372	intron_retention	FALSE	canonical	0	0	junction_6	1.78144708566049	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATATATATTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	76240687	76248029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76241032_76241123_76242031_76242107_76242517_76242680_76244629_76244711_76244928_76245006_76245187_76245312_76245511_76245610_76245733_76245816_76245974_76246865_76247477_76247561_76247624_76247730
ES.12136.4	chr15	+	3536	17	NNC	ENSMUSG00000109179.3	novel	6581	24	NA	NA	2056	-1353	intron_retention	FALSE	canonical	0	0	junction_4	2.0453835214942	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTGTATCTATATAT	NA	False	NA	NA	False	NA	NA	NA	76240687	76248048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76241032_76241123_76241267_76241897_76242031_76242107_76242230_76242455_76242517_76242680_76242831_76242909_76243171_76243257_76243381_76243456_76243541_76244499_76244629_76244711_76244928_76245006_76245511_76245610_76245733_76245820_76245974_76246865_76247477_76247561_76247624_76247730
ES.12136.5	chr15	+	5975	7	NIC	ENSMUSG00000109179.3	novel	6581	24	NA	NA	2080	-1357	intron_retention	FALSE	canonical	2	4	junction_1	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTATTGTGTATCTAT	NA	False	NA	NA	False	NA	NA	NA	76240711	76248044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76241032_76241123_76244629_76244711_76245511_76245610_76245733_76245816_76245974_76246865_76247624_76247730
ES.12136.6	chr15	+	2853	8	Fusion	ENSMUSG00000022554.8_ENSMUSG00000109179.3	novel	1993	6	NA	NA	6967	-319	multi-exon	FALSE	canonical	0	0	junction_2	44.2580558791739	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCGTCCCTTCCTAGAA	2093	False	NA	66	True	NA	NA	NA	76245598	76255318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_76245733_76245816_76245974_76252209_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.7	chr15	+	2009	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	0	-16	0	16	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTCTCCTGCGTGTTC	3544	False	NA	NA	False	NA	NA	NA	76253097	76255653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12136.8	chr15	+	2498	1	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	8	-34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3552	False	NA	NA	False	NA	NA	NA	76253105	76255603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76253100_76255600
ES.12136.9	chr15	+	1325	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	8	660	8	393	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGCTGCCCAATCCTG	3552	False	NA	NA	False	AGTAAA	-14	NA	76253105	76254977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ES.12137.1	chr15	-	210	1	Intergenic	novelGene_10153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	76250793	76250583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76250600_76250800
ES.12138.1	chr15	-	182	1	Intergenic	novelGene_10154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTGTAGCTGGTCTT	9341	False	NA	NA	False	NA	NA	NA	76260512	76260330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76260300_76260500
ES.12139.1	chr15	+	6066	42	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-29	0	intron_retention	FALSE	canonical	3	62	junction_5	19.712689439182	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264683	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.10	chr15	+	5786	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	intron_retention	FALSE	canonical	3	62	junction_5	19.8304748411707	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264718	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.11	chr15	+	5136	42	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.4163049573312	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264718	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334234_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.12	chr15	+	5165	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	23.574843427484	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264718	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.13	chr15	+	5382	44	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	32.1364384467399	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264718	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76295757_76295839_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316511_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334234_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.14	chr15	+	5239	43	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	27.0487088982307	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264719	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317461_76317597_76317737_76317818_76318026_76318142_76318262_76318353_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.15	chr15	+	5852	42	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-3	0	intron_retention	FALSE	canonical	3	62	junction_5	19.7353700360054	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264719	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336550_76336627_76336694_76337025
ES.12139.16	chr15	+	5314	44	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.0434020088451	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264720	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276664_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334234_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.17	chr15	+	5335	45	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	26.8112760754386	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	NA	False	NA	7	True	AATAAA	-13	NA	76264723	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76295757_76295839_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.18	chr15	+	5231	44	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	22.3340342525131	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264727	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336648_76336694_76337025
ES.12139.19	chr15	+	6838	43	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	intron_retention	TRUE	canonical	0	0	junction_7	32.6184914794439	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264727	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292099_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311415_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320187_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76332952_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.2	chr15	+	5282	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	-10	-4	-10	4	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACATTGTATCAATACCA	NA	False	NA	14	True	AATAAA	-20	NA	76264702	76337242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.20	chr15	+	5092	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_39	22.1271321531793	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264731	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.21	chr15	+	5324	45	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.4738555529646	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264731	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76295757_76295839_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318353_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.22	chr15	+	5494	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_5	19.7753970005816	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264731	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.23	chr15	+	5073	42	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.118412031666	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264731	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.25	chr15	+	5382	45	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7486772670573	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	NA	False	NA	7	True	AATAAA	-13	NA	76264731	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76271236_76271373_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.26	chr15	+	5221	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	23.3758723023482	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264731	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.27	chr15	+	5330	31	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	1320	intron_retention	FALSE	canonical	1	1	junction_1	18.3338181754071	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACCTGAGCCTTGTGTG	NA	False	NA	NA	False	AGTAAA	-15	NA	76264731	76332352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715
ES.12139.28	chr15	+	5097	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_37	23.325666864934	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264735	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.29	chr15	+	4976	43	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	22.1271321531793	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264737	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335717_76336335_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.3	chr15	+	5639	42	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_35	24.1631624091005	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264712	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76331566_76334285_76334424_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.30	chr15	+	5303	45	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	26.5999596097376	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264739	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76327732_76327796_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.31	chr15	+	6968	44	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	10	0	intron_retention	TRUE	canonical	0	0	junction_4	34.4482901524796	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264741	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285747_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307188_76307281_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318850_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76332952_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.33	chr15	+	5100	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	24.0109692430549	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264741	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.34	chr15	+	5174	41	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	33.1950297484428	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264753	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278130_76286729_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76295757_76295839_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316502_76317469_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.35	chr15	+	5799	42	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_27	24.2597729866925	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264754	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319941_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.36	chr15	+	5205	43	ISM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	9516	1	-2	0	3prime_fragment	FALSE	canonical	3	62	junction_4	19.7459488080737	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	2	True	NA	9	True	AATAAA	-15	NA	76274228	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.38	chr15	+	5470	34	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	18355	0	intron_retention	FALSE	canonical	0	0	junction_22	29.7799397540341	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76292585	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76327732_76327796_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.39	chr15	+	5379	23	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	18407	0	intron_retention	FALSE	non_canonical	0	0	junction_5	19.6582369756735	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTATGACTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	76292637	76323944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305409_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76320318_76321437
ES.12139.4	chr15	+	5609	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	29.7497117880816	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264712	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76301495_76301619_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.40	chr15	+	4553	37	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	18448	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.0552899924129	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	NA	False	NA	7	True	AATAAA	-13	NA	76292678	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318455_76318767_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.41	chr15	+	4800	30	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-6701	0	intron_retention	FALSE	canonical	3	65	junction_4	21.0564611011029	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76305398	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.42	chr15	+	5449	27	NNC	ENSMUSG00000022558.17	novel	9830	39	NA	NA	-4584	0	intron_retention	TRUE	canonical	0	0	junction_1	26.6498220960568	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76307515	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76307598_76307639_76308036_76311308_76311417_76311711_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76331566_76334285_76334424_76334838_76335736_76336004_76336161_76336243_76336379_76336446_76336694_76337025
ES.12139.44	chr15	+	2986	25	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	32.2410355758	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	3012	False	NA	7	True	AATAAA	-13	NA	76312883	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335249_76335409_76335546_76335717_76336335_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.45	chr15	+	4947	11	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	219	641	intron_retention	FALSE	canonical	3	75	junction_2	11.1090053560164	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGAACGGTGGGCTTG	3204	False	NA	NA	False	CATAAA	-9	NA	76313075	76331673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76313461_76313987_76314108_76314376_76314500_76316348_76317818_76318026_76318142_76318262_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368
ES.12139.46	chr15	+	4593	21	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	1566	0	intron_retention	FALSE	canonical	3	63	junction_2	22.4287204271666	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	4551	False	NA	7	True	AATAAA	-13	NA	76314422	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318988_76319969_76320106_76320204_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.47	chr15	+	3762	15	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-5489	0	intron_retention	FALSE	canonical	0	0	junction_5	43.1471142648933	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	9884	False	NA	9	True	AATAAA	-15	NA	76319755	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76320106_76320204_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76332952_76333200_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.48	chr15	+	8597	1	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	825	-754	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGAGAAGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	76326069	76334666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76326100_76334700
ES.12139.49	chr15	+	3107	12	NIC	ENSMUSG00000022558.17	novel	4260	25	NA	NA	4236	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	48.131019533377	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	1227	False	NA	10	True	AATAAA	-16	NA	76329480	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76330882_76331368_76331566_76332952_76333200_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.5	chr15	+	4946	41	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	24.4803492622144	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264712	76337238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.50	chr15	+	3856	9	ISM	ENSMUSG00000022558.17	ENSMUST00000161683.8	4260	25	19589	3	-2166	0	3prime_fragment	FALSE	canonical	3	91	junction_4	20.7059019364045	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	163	False	NA	7	True	AATAAA	-13	NA	76331688	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.12139.6	chr15	+	5340	43	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	5	0	intron_retention	FALSE	canonical	3	62	junction_5	18.2832339587648	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGACATTGTATCAA	NA	False	NA	9	True	AATAAA	-15	NA	76264717	76337237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336694_76337025
ES.12139.8	chr15	+	5196	33	NIC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_32	17.2929718382932	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTATGACTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	76264718	76323944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76322230
ES.12139.9	chr15	+	5245	43	NNC	ENSMUSG00000022558.17	novel	5268	44	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.9711655963024	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGGTGACATTGTATC	NA	False	NA	7	True	AATAAA	-13	NA	76264718	76337235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ES.1214.1	chr1	-	1752	6	NNC	ENSMUSG00000026389.17	novel	1288	5	NA	NA	-3	-8048	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.7982455465327	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCAGTGTCGCTTGCC	NA	False	NA	NA	False	AATAAA	-19	NA	120192988	120126534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_120126721_120126768_120127115_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ES.1214.10	chr1	-	1315	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGGTCTCCCATAAGCT	NA	False	NA	NA	False	NA	NA	NA	120167913	120166598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120166600_120167900
ES.1214.2	chr1	-	2365	1	Genic_Genomic	ENSMUSG00000026389.17	novel	NA	NA	NA	NA	39373	868	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGTGCTGGCGAGAC	NA	False	NA	NA	False	ATTAAA	-14	NA	120153612	120151247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_120151200_120153600
ES.1214.3	chr1	-	2964	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-193	-19	-193	19	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTTTATTATTCTTA	NA	False	NA	-2	True	NA	NA	NA	120193207	120154133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ES.1214.4	chr1	-	2879	5	ISM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	2417	-246	135	16	3prime_fragment	FALSE	canonical	3	10	junction_4	16.3554272337961	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTTGTTTATTATTC	NA	False	NA	-5	True	NA	NA	NA	120198018	120154136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854
ES.1214.6	chr1	-	2641	6	NNC	ENSMUSG00000026389.17	novel	2752	5	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.3673623582702	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTAAAATTGTCCTTT	NA	False	NA	-16	True	NA	NA	NA	120193009	120154147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_120155659_120161971_120162137_120169161_120169471_120169581_120169690_120171497_120171998_120192961
ES.1214.7	chr1	-	2548	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-29	233	-29	-3	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATAGGGACCCTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	120193043	120154385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ES.1214.8	chr1	-	1749	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	-1	1004	-1	-774	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGGGTCCC	NA	False	NA	NA	False	NA	NA	NA	120193015	120155156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ES.1214.9	chr1	-	8287	2	NIC	ENSMUSG00000026389.17	novel	2752	5	NA	NA	11	-9370	intron_retention	FALSE	canonical	3	36	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	120193003	120163752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_120171998_120192961
ES.12140.1	chr15	+	773	1	Intergenic	novelGene_10156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAACA	2625	False	NA	NA	False	NA	NA	NA	76357125	76357898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76357100_76357900
ES.12141.1	chr15	-	170	1	Intergenic	novelGene_10155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4934	False	NA	NA	False	NA	NA	NA	76268964	76268794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76268800_76269000
ES.12142.1	chr15	-	4700	1	Antisense	novelGene_ENSMUSG00000022558.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGACCTAAAACCATAAAG	NA	False	NA	NA	False	NA	NA	NA	76329936	76325236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76325200_76329900
ES.12142.2	chr15	-	4224	5	Antisense	novelGene_ENSMUSG00000022558.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGACCTAAAACCATAAAG	NA	False	NA	NA	False	NA	NA	NA	76334860	76325236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76327603_76330713_76330881_76331367_76331560_76332946_76334422_76334836
ES.12143.1	chr15	-	2624	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	-27	34	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTGTCACTTGTGT	NA	False	NA	0	True	NA	NA	NA	76361504	76337154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.10	chr15	-	2597	14	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	30	-7	intron_retention	FALSE	canonical	3	559	junction_9	45.1405431851817	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGACCCTGGCTGGCA	NA	False	NA	-41	True	AATAAA	-13	NA	76361447	76337195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.11	chr15	-	2216	14	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	13	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	169.373226753311	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGACCCTGGCTGGCA	NA	False	NA	-41	True	AATAAA	-13	NA	76361464	76337195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76361328
ES.12143.14	chr15	-	3295	7	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	-500	-9	intron_retention	FALSE	canonical	3	559	junction_5	61.6134905862525	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTGACCCTGGCTGG	9736	False	NA	-43	True	AATAAA	-11	NA	76340973	76337197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76338559_76338651_76339621_76339695_76339798_76339881_76340000_76340071
ES.12143.15	chr15	-	2316	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	-8	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	163.901476129872	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTGACCCTGGCTGG	NA	False	NA	-43	True	AATAAA	-11	NA	76361485	76337197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76361328
ES.12143.16	chr15	-	2351	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	-7	147	-7	-147	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGCCTCCAGCAACTGC	NA	False	NA	-1	True	AATAGA	-24	NA	76361484	76337335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.17	chr15	-	2299	16	NNC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	30	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.845319143035	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCCTCCAGCAACT	NA	False	NA	-3	True	AATAGA	-22	NA	76361447	76337337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76337566_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.18	chr15	-	2428	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	-15	-153	intron_retention	FALSE	canonical	3	559	junction_10	45.0288456300571	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGATTCAGCCTCCAGC	NA	False	NA	-7	True	AATAGA	-18	NA	76361492	76337341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.19	chr15	-	2280	16	NNC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	17	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	159.175458744954	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGATTCAGCCTCCAGC	NA	False	NA	-7	True	AATAGA	-18	NA	76361460	76337341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359081_76361328
ES.12143.2	chr15	-	2652	14	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	33	34	intron_retention	FALSE	canonical	3	559	junction_9	45.6831122578369	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTGTCACTTGTGT	NA	False	NA	0	True	NA	NA	NA	76361444	76337154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.22	chr15	-	2410	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	-2	-155	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGATTCAGCCTCCA	NA	False	NA	-9	True	AATAGA	-16	NA	76361479	76337343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.23	chr15	-	2291	16	NNC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	33	-155	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.462207295508	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGATTCAGCCTCCA	NA	False	NA	-9	True	AATAGA	-16	NA	76361444	76337343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338294_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.3	chr15	-	2553	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	-30	-32	-30	32	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGTGTGTCACTTGT	NA	False	NA	-2	True	NA	NA	NA	76361507	76337156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.4	chr15	-	2538	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	30	6	intron_retention	FALSE	canonical	3	559	junction_10	44.7711300017394	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGCAGAGTCCTCTA	NA	False	NA	-28	True	AATAAA	-26	NA	76361447	76337182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.5	chr15	-	2940	10	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	14	1	intron_retention	FALSE	canonical	3	559	junction_5	32.7044377250792	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	False	NA	-33	True	AATAAA	-21	NA	76361463	76337187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76338559_76338651_76338785_76338873_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.7	chr15	-	2828	11	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	44	0	intron_retention	FALSE	canonical	3	559	junction_6	48.1825694624104	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	False	NA	-34	True	AATAAA	-20	NA	76361433	76337188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76337579_76337662_76337771_76337843_76338559_76338651_76338785_76338873_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ES.12143.8	chr15	-	2440	16	NNC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	159.727963181849	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGACCCTGGCTGGCA	NA	False	NA	-41	True	AATAAA	-13	NA	76361440	76337195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340220_76350971_76351053_76358947_76359122_76361328
ES.12144.1	chr15	+	2254	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-78	1	intron_retention	FALSE	canonical	3	226	junction_10	34.6941774713456	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7043	False	NA	11	True	NA	NA	NA	76361543	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.10	chr15	+	2107	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	1	junction_4	94.3067335877985	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAC	7110	False	NA	7	True	NA	NA	NA	76361610	76385167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.11	chr15	+	3620	3	ISM	ENSMUSG00000022556.12	ENSMUST00000226860.2	1975	8	-44	184	-11	1	intron_retention	FALSE	canonical	1	1	junction_2	164	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7110	False	NA	11	True	NA	NA	NA	76361610	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76361918_76380169_76380279_76381967
ES.12144.12	chr15	+	2061	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	-34	-9	-11	3	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATATATATATATAT	7110	False	NA	21	True	NA	NA	NA	76361610	76385181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ES.12144.13	chr15	+	1877	11	NIC	ENSMUSG00000022556.12	novel	2002	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	111.369475171611	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7110	False	NA	30	True	CATAAA	-19	NA	76361610	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ES.12144.14	chr15	+	1913	10	NIC	ENSMUSG00000022556.12	novel	2018	12	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	135.90937430763	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7110	False	NA	9	True	NA	NA	NA	76361610	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381818_76381895_76381967_76382116_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ES.12144.15	chr15	+	4536	6	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	205	junction_4	51.4003891035856	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATACA	7110	False	NA	8	True	NA	NA	NA	76361610	76385168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76384397_76384466_76384537_76384616
ES.12144.16	chr15	+	2272	13	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	-10	1	intron_retention	FALSE	canonical	3	17	junction_9	107.170813812966	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7111	False	NA	13	True	NA	NA	NA	76361611	76385173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384537_76384616
ES.12144.17	chr15	+	2119	7	NIC	ENSMUSG00000022556.12	novel	1965	11	NA	NA	-10	1	intron_retention	FALSE	canonical	1	1	junction_4	149.55350213218	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7111	False	NA	11	True	NA	NA	NA	76361611	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381967_76382116_76382621_76382892_76384147
ES.12144.18	chr15	+	2236	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-10	1	intron_retention	FALSE	canonical	3	205	junction_10	42.1345738562714	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7111	False	NA	9	True	NA	NA	NA	76361611	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.19	chr15	+	1842	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	89.2272611494458	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7113	False	NA	9	True	NA	NA	NA	76361613	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.2	chr15	+	2115	11	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-61	0	intron_retention	FALSE	non_canonical	0	0	junction_1	115.934507373775	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7060	False	NA	12	True	NA	NA	NA	76361560	76385172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380167_76380279_76380652_76380790_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.20	chr15	+	2568	10	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	10	junction_5	122.241210646193	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	7114	False	NA	17	True	NA	NA	NA	76361614	76385177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76382116_76382621_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.21	chr15	+	3616	7	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-6	1	intron_retention	FALSE	canonical	2	10	junction_5	112.02938602587	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7115	False	NA	11	True	NA	NA	NA	76361615	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76381161_76381818_76381895_76381967_76382116_76382621_76384254_76384330
ES.12144.22	chr15	+	2382	10	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	262	junction_4	30.3502191502654	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7115	False	NA	12	True	NA	NA	NA	76361615	76385172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384537_76384616
ES.12144.23	chr15	+	2268	11	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-29	-5	-6	-1	intron_retention	FALSE	canonical	3	226	junction_10	36.0743676313252	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	7115	False	NA	17	True	NA	NA	NA	76361615	76385177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330
ES.12144.24	chr15	+	2187	12	ISM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-27	4	-4	0	intron_retention	FALSE	canonical	3	205	junction_11	41.7309366583134	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATACA	7117	False	NA	8	True	NA	NA	NA	76361617	76385168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466
ES.12144.25	chr15	+	2832	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-1	1	intron_retention	FALSE	canonical	2	8	junction_10	92.9516541003978	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7120	False	NA	13	True	NA	NA	NA	76361620	76385173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384624
ES.12144.26	chr15	+	3097	9	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	3	64	intron_retention	FALSE	canonical	3	226	junction_7	38.1698506677718	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCTACTGTGACCACC	7124	False	NA	82	True	NA	NA	NA	76361624	76385242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.27	chr15	+	3632	7	NIC	ENSMUSG00000022556.12	novel	2002	11	NA	NA	3	-2	intron_retention	FALSE	canonical	3	5	junction_3	115.261176850182	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATACATA	7124	False	NA	6	True	NA	NA	NA	76361624	76385166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381818_76381895_76381967_76382249_76382353_76384254_76384330
ES.12144.28	chr15	+	3039	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-15	-940	-5	-1	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTTGCAGCTCCACCT	7129	False	NA	NA	False	AATAAA	-18	NA	76361629	76386112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.29	chr15	+	2178	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	7137	False	NA	15	True	NA	NA	NA	76361637	76385175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.3	chr15	+	2161	13	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	85.9219607162996	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	7060	False	NA	17	True	NA	NA	NA	76361560	76385177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382633_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.30	chr15	+	2756	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	3	1	intron_retention	FALSE	canonical	3	205	junction_10	41.8120548871291	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATATATATATAT	7137	False	NA	19	True	NA	NA	NA	76361637	76385179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.31	chr15	+	3366	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	226	junction_9	35.3802204628518	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGAGAGTCCCCTTTAA	7137	False	NA	29	True	CATAAA	-18	NA	76361637	76385121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76384254_76384330_76384537_76384616
ES.12144.32	chr15	+	2279	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	1	intron_retention	FALSE	canonical	3	226	junction_9	35.9143425388799	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7138	False	NA	9	True	NA	NA	NA	76361638	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.33	chr15	+	2144	12	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	1	intron_retention	FALSE	canonical	2	2	junction_7	89.2817992057815	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7138	False	NA	9	True	NA	NA	NA	76361638	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382366_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.34	chr15	+	1915	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	88.2095551504184	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7138	False	NA	30	True	CATAAA	-19	NA	76361638	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.35	chr15	+	2055	13	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	86.9295292495913	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7138	False	NA	30	True	CATAAA	-19	NA	76361638	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382277_76382366_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.36	chr15	+	2921	9	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	226	junction_8	38.8707795136655	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7138	False	NA	30	True	CATAAA	-19	NA	76361638	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330
ES.12144.37	chr15	+	3563	10	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	4	64	intron_retention	FALSE	canonical	3	262	junction_4	29.4282974593846	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCTACTGTGACCACC	7138	False	NA	82	True	NA	NA	NA	76361638	76385242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76384537_76384616
ES.12144.38	chr15	+	1839	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	93.575851585759	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7138	False	NA	30	True	CATAAA	-19	NA	76361638	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.39	chr15	+	4713	4	ISM	ENSMUSG00000022556.12	ENSMUST00000226872.2	2104	13	5	-52	5	46	intron_retention	FALSE	canonical	3	326	junction_3	11.6141675934562	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGGTCAGATGATAAACA	7139	False	NA	64	True	NA	NA	NA	76361639	76385224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035
ES.12144.4	chr15	+	2253	12	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-60	1	intron_retention	FALSE	canonical	1	2	junction_7	89.2817992057815	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7061	False	NA	13	True	NA	NA	NA	76361561	76385173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382277_76382366_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.40	chr15	+	3413	9	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	5	1	intron_retention	FALSE	canonical	1	1	junction_4	104.475999038057	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7139	False	NA	9	True	NA	NA	NA	76361639	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76384537_76384616
ES.12144.41	chr15	+	2234	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-4	1	intron_retention	FALSE	canonical	3	262	junction_4	29.8745711266287	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7140	False	NA	11	True	NA	NA	NA	76361640	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384537_76384616
ES.12144.42	chr15	+	2038	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-4	50	-4	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7140	False	NA	30	True	CATAAA	-19	NA	76361640	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.43	chr15	+	1879	10	NIC	ENSMUSG00000022556.12	novel	2018	12	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	117.695254107828	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	7140	False	NA	17	True	NA	NA	NA	76361640	76385177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382116_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ES.12144.44	chr15	+	2005	14	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.5285568496051	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATATAT	7140	False	NA	13	True	NA	NA	NA	76361640	76385173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382689_76382772_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.45	chr15	+	4698	5	NIC	ENSMUSG00000022556.12	novel	2002	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	226	junction_3	47.4473392299294	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7141	False	NA	30	True	CATAAA	-19	NA	76361641	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76384254_76384330_76384537_76384616
ES.12144.46	chr15	+	2852	13	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	17	junction_9	83.8200784750024	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGAGTCCCCTTTAAC	7142	False	NA	30	True	CATAAA	-19	NA	76361642	76385122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.47	chr15	+	2349	10	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	226	junction_9	37.5972812255827	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAC	7146	False	NA	7	True	NA	NA	NA	76361646	76385167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330
ES.12144.48	chr15	+	1983	12	NNC	ENSMUSG00000022556.12	novel	2018	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	109.52134778131	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7148	False	NA	11	True	NA	NA	NA	76361648	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381997_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ES.12144.49	chr15	+	2070	13	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.7161011712502	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7148	False	NA	11	True	NA	NA	NA	76361648	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380781_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.5	chr15	+	2232	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	-81	-67	-58	61	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGCTCTACTGTGACC	7063	False	NA	79	True	NA	NA	NA	76361563	76385239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.50	chr15	+	3620	9	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	3	intron_retention	FALSE	canonical	3	226	junction_8	38.8569089738234	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	7148	False	NA	15	True	NA	NA	NA	76361648	76385175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76384254_76384330
ES.12144.51	chr15	+	3206	8	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_7	39.1824617159572	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7148	False	NA	11	True	NA	NA	NA	76361648	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330
ES.12144.52	chr15	+	4486	7	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	271	junction_4	30.6671195618731	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAC	7149	False	NA	7	True	NA	NA	NA	76361649	76385167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76381895_76381967_76382030_76382151_76382491_76382621_76384537_76384616
ES.12144.53	chr15	+	2017	12	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	127.298374039333	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	7150	False	NA	15	True	NA	NA	NA	76361650	76385175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382116_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.54	chr15	+	4665	6	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	205	junction_4	57.6367938039582	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATACA	7150	False	NA	8	True	NA	NA	NA	76361650	76385168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.55	chr15	+	2023	13	NNC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_9	86.4141754703603	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	7159	False	NA	11	True	NA	NA	NA	76361659	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382689_76382803_76382892_76384147_76384254_76384330_76384537_76384616
ES.12144.56	chr15	+	3401	7	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	2	intron_retention	FALSE	canonical	2	10	junction_5	116.000598657459	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATATATA	7160	False	NA	14	True	NA	NA	NA	76361660	76385174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76382116_76382621_76384254_76384330
ES.12144.57	chr15	+	1469	9	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-2040	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	91.5723757472744	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAC	NA	False	NA	7	True	NA	NA	NA	76380168	76385167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76380279_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ES.12144.58	chr15	+	4081	5	NIC	ENSMUSG00000022556.12	novel	1965	11	NA	NA	-1974	1	intron_retention	FALSE	canonical	3	274	junction_4	29.9947912144759	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATACATAT	NA	False	NA	11	True	NA	NA	NA	76380234	76385171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76380279_76380652_76380790_76381035_76382249_76382353_76382491_76382621
ES.12144.59	chr15	+	2553	3	NIC	ENSMUSG00000022556.12	novel	2002	11	NA	NA	-21	3	intron_retention	FALSE	canonical	3	226	junction_2	24	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATACATACATATATAT	1897	False	NA	15	True	NA	NA	NA	76382414	76385175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76382491_76382621_76384254_76384330
ES.12144.6	chr15	+	3202	8	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	-35	-74	intron_retention	FALSE	canonical	3	17	junction_5	131.037305795732	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAGCTCTCAGGAGTT	7086	False	NA	NA	False	CATAAA	-19	NA	76361586	76384816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76382491_76382621_76383416_76384147_76384254_76384466_76384537_76384616
ES.12144.60	chr15	+	2327	2	NIC	ENSMUSG00000022556.12	novel	578	3	NA	NA	202	-1	intron_retention	FALSE	canonical	3	46	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATATATATAT	2120	False	NA	17	True	NA	NA	NA	76382637	76385177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76384254_76384466
ES.12144.61	chr15	+	6166	1	Genic_Genomic	ENSMUSG00000022556.12	novel	NA	NA	NA	NA	1639	5857	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAAAAAACACACACCT	5287	False	NA	NA	False	NA	NA	NA	76385804	76391970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_76385800_76392000
ES.12144.62	chr15	+	4376	7	Antisense	novelGene_ENSMUSG00000022555.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAACAAAAAAAC	6525	False	NA	NA	False	NA	NA	NA	76387042	76391962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76387401_76387475_76387629_76387717_76387822_76387905_76387984_76388067_76388420_76388547_76388602_76388685
ES.12144.7	chr15	+	2298	13	NIC	ENSMUSG00000022556.12	novel	2104	13	NA	NA	-30	1	intron_retention	FALSE	canonical	3	17	junction_9	106.207605921401	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	7091	False	NA	9	True	NA	NA	NA	76361591	76385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466
ES.12144.8	chr15	+	2949	10	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-28	0	intron_retention	FALSE	canonical	3	226	junction_9	36.9804753289564	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	7093	False	NA	18	True	NA	NA	NA	76361593	76385178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330
ES.12144.9	chr15	+	3468	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	205	junction_9	39.5637460309309	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATATATATA	7097	False	NA	16	True	NA	NA	NA	76361597	76385176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76384397_76384466_76384537_76384616
ES.12145.1	chr15	-	1964	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	-51	-25	-49	25	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCTGCACCCATATG	NA	False	NA	20	True	AATAAA	-43	NA	76396202	76386189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.10	chr15	-	1918	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-6	0	intron_retention	FALSE	canonical	3	155	junction_14	23.2028543282845	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396032	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.11	chr15	-	1965	17	NNC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.670815863721	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396221	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387151_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.12	chr15	-	1897	16	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-59	0	intron_retention	FALSE	canonical	3	155	junction_15	22.425778817146	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396085	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.13	chr15	-	1848	16	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	19	0	intron_retention	FALSE	canonical	1	1	junction_13	54.1688717499882	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396007	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388794_76388865_76388907_76390765_76390854_76395754
ES.12145.14	chr15	-	1788	17	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	51.9276840904734	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396083	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388570_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.16	chr15	-	2008	14	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	155	junction_13	23.5372045918796	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGGGGTTGTGGAGG	NA	False	NA	-6	True	AATAAA	-17	NA	76396041	76386215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.17	chr15	-	1832	16	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-50	0	combination_of_known_splicesites	TRUE	canonical	3	4	junction_11	53.5149408005735	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCAGGGGTTGTGGAG	NA	False	NA	-7	True	AATAAA	-16	NA	76396203	76386216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.18	chr15	-	1972	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	56	-6	intron_retention	FALSE	canonical	3	155	junction_14	23.5173622358166	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTCTTGCAGGGGTT	NA	False	NA	-13	True	AATAAA	-10	NA	76396095	76386222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387272_76387353_76387399_76387473_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.2	chr15	-	1641	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	55.5358406061953	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTTGTGGAGGCTGCTG	NA	False	NA	0	True	AATAAA	-23	NA	76396028	76386209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76395754
ES.12145.20	chr15	-	1702	17	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-18	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	48.5218620185788	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTCTTGCAGGGGT	NA	False	NA	-14	True	AATAAA	-9	NA	76396044	76386223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387202_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.21	chr15	-	1728	17	NNC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.7867849335137	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTCTTGCAGGGGT	NA	False	NA	-14	True	AATAAA	-9	NA	76396022	76386223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76386589_76386691_76386729_76386839_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.22	chr15	-	1787	17	NNC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.0742807611852	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTCTTGCAGGGGT	NA	False	NA	-14	True	AATAAA	-9	NA	76396043	76386223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76386605_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.3	chr15	-	1943	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_12	56.0264150528433	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	-4	True	AATAAA	-19	NA	76396027	76386213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388794_76388865_76388907_76390765_76390854_76395754
ES.12145.4	chr15	-	1938	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-18	1	intron_retention	FALSE	canonical	3	155	junction_14	22.9658131018384	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGGTTGTGGAGGCT	NA	False	NA	-4	True	AATAAA	-19	NA	76396044	76386213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.6	chr15	-	2423	12	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-233	0	intron_retention	FALSE	canonical	3	183	junction_6	18.6392458968518	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76389628	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388421_76388548_76388602_76388685_76388772_76388865
ES.12145.7	chr15	-	3028	13	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	474	0	intron_retention	FALSE	canonical	3	19	junction_5	54.8975687581477	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76390331	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387202_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388602_76388685_76388772_76388865
ES.12145.8	chr15	-	1783	15	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	98	0	intron_retention	FALSE	canonical	3	155	junction_14	23.1759023336653	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76395776	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ES.12145.9	chr15	-	1863	16	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	-6	0	intron_retention	FALSE	canonical	3	155	junction_15	22.6946885611786	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396032	76386214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388907_76390765_76390854_76395754
ES.12146.1	chr15	+	1973	5	NNC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	-19902	-733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.5042473976661	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCCATGAGCACAGCT	NA	False	NA	12	True	AATAAA	-22	NA	76403129	76425597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76403389_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ES.12146.2	chr15	+	179	1	Antisense	novelGene_ENSMUSG00000022559.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAACCTTTATT	NA	False	NA	NA	False	NA	NA	NA	76419747	76419926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76419700_76419900
ES.12146.3	chr15	+	2137	5	NNC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	-38	-742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.5042473976661	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTGTTAATCCCATG	NA	False	NA	3	True	AATAAA	-13	NA	76422993	76425588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76423396_76423552_76423803_76423893_76424780_76424871_76424996_76425113
ES.12146.4	chr15	+	2314	3	FSM	ENSMUSG00000022560.10	ENSMUST00000230994.2	2889	3	-147	722	-15	-722	multi-exon	FALSE	canonical	3	120	junction_1	0.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGCTCTATGCCAGGC	NA	False	NA	23	True	AATAAA	-33	NA	76423016	76425608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76423396_76423582_76423803_76423893
ES.12146.5	chr15	+	2104	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-10	3195	-10	-717	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTATGCCAGGCCTCCT	NA	False	NA	28	True	AATAAA	-38	NA	76423021	76425613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ES.12146.6	chr15	+	2208	4	ISM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	-1	3200	-1	-722	intron_retention	FALSE	canonical	3	120	junction_1	1.69967317119759	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGCTCTATGCCAGGC	NA	False	NA	23	True	AATAAA	-33	NA	76423030	76425608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871
ES.12146.7	chr15	+	4014	6	NNC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	-1	3268	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	46.9365529198726	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCTCTTGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	76423030	76432076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113_76425228_76429771
ES.12146.8	chr15	+	5489	3	FSM	ENSMUSG00000022560.10	ENSMUST00000230994.2	2889	3	-122	-2478	10	0	multi-exon	FALSE	canonical	3	120	junction_1	0.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCTGTACTCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	76423041	76428808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76423396_76423582_76423803_76423893
ES.12146.9	chr15	+	2096	4	NIC	ENSMUSG00000022560.10	novel	5289	5	NA	NA	-42	-717	intron_retention	FALSE	canonical	3	110	junction_3	4.96655480858378	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTATGCCAGGCCTCCT	NA	False	NA	28	True	AATAAA	-38	NA	76423121	76425613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76423396_76423582_76423803_76423893_76424996_76425113
ES.12147.1	chr15	-	1738	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	-37	9	-26	0	multi-exon	FALSE	canonical	3	128	junction_8	22.8988946239769	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422972	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ES.12147.10	chr15	-	2463	5	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	173	junction_1	8.89873586527884	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422928	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420164_76420424_76420672_76420772_76421207_76421289_76421398_76421488
ES.12147.11	chr15	-	1437	9	NNC	ENSMUSG00000022559.9	novel	1710	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	57.8916012906881	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422944	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422797
ES.12147.12	chr15	-	2614	3	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	158	junction_2	19	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422946	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420672_76420772_76421621_76421922
ES.12147.13	chr15	-	1944	8	NNC	ENSMUSG00000022559.9	novel	1953	8	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_3	62.337134738027	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTTATTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	76422966	76419930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76420164_76420424_76420672_76420772_76420969_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
ES.12147.3	chr15	-	2053	7	NIC	ENSMUSG00000022559.9	novel	1953	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	133	junction_6	20.1246117974981	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422950	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420164_76420424_76420672_76420772_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
ES.12147.4	chr15	-	2158	6	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	13	0	intron_retention	TRUE	canonical	3	158	junction_5	12.595237195067	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422922	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421621_76421922
ES.12147.5	chr15	-	1470	9	NNC	ENSMUSG00000022559.9	novel	1710	9	NA	NA	-2160	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.4672966848166	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76425106	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76424926
ES.12147.6	chr15	-	1678	9	NNC	ENSMUSG00000022559.9	novel	1710	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.6046073274107	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422948	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76420164_76420424_76420672_76420772_76420969_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ES.12147.7	chr15	-	2149	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	-58	0	-58	0	multi-exon	FALSE	canonical	3	158	junction_6	11.5325625946708	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76423004	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
ES.12147.8	chr15	-	2313	6	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_5	22.3839228018683	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422946	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420672_76420772_76421005_76421092_76421207_76421289_76421621_76421922_76421987_76422116
ES.12147.9	chr15	-	2279	5	NIC	ENSMUSG00000022559.9	novel	2091	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	158	junction_4	14.0066948278314	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422955	76419929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76420164_76420424_76420672_76420772_76421207_76421289_76421621_76421922
ES.12148.1	chr15	-	2568	1	Antisense	novelGene_ENSMUSG00000022560.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	76428813	76426245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76426200_76428800
ES.12148.2	chr15	-	2589	1	Antisense	novelGene_ENSMUSG00000022560.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCCTTATCCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	76430239	76427650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76427600_76430200
ES.12149.1	chr15	+	172	1	Intergenic	novelGene_10157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	76451602	76451774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76451600_76451800
ES.1215.1	chr1	+	178	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	120207238	120207416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_120207200_120207400
ES.12150.1	chr15	+	209	1	Intergenic	novelGene_10158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACGTTACTGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	76455062	76455271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76455100_76455300
ES.12151.1	chr15	+	2436	10	NIC	ENSMUSG00000022550.19	novel	2262	12	NA	NA	-1	-12	intron_retention	FALSE	canonical	3	116	junction_6	19.3160842592672	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTCGTCTGAAAGAAA	3101	False	NA	NA	False	NA	NA	NA	76460556	76479996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478648_76478728_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.10	chr15	+	2050	14	NIC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	-6	0	intron_retention	FALSE	canonical	2	13	junction_4	37.4853028398342	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3143	False	NA	NA	False	NA	NA	NA	76460598	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.11	chr15	+	2070	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	114	junction_10	18.5133887262753	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3147	False	NA	NA	False	AAGAAA	-1	NA	76460602	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479467_76479536_76479654_76479738
ES.12151.12	chr15	+	1482	12	NNC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55.1666146496305	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3148	False	NA	NA	False	NA	NA	NA	76460603	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76478008_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479034_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.14	chr15	+	2257	11	NNC	ENSMUSG00000022550.19	novel	2058	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	46.2359167747326	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATCGTTTTCTTTG	3156	False	NA	NA	False	NA	NA	NA	76460611	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477672_76477832_76477918_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.15	chr15	+	2134	13	ISM	ENSMUSG00000022550.19	ENSMUST00000160784.8	1998	15	23	7	0	0	intron_retention	FALSE	canonical	3	114	junction_10	13.951304200285	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3156	False	NA	NA	False	NA	NA	NA	76460611	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213
ES.12151.16	chr15	+	1935	15	NNC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.3018797909469	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3158	False	NA	NA	False	NA	NA	NA	76460613	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477672_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.17	chr15	+	2193	12	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	9	-8	intron_retention	FALSE	canonical	3	114	junction_9	14.2155775341032	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCGTCTGAAAGAAATCGT	3166	False	NA	NA	False	NA	NA	NA	76460621	76480000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213
ES.12151.18	chr15	+	2118	13	NIC	ENSMUSG00000022550.19	novel	2058	14	NA	NA	9	0	intron_retention	FALSE	canonical	2	13	junction_4	39.0049854363373	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3166	False	NA	NA	False	NA	NA	NA	76460621	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478648_76478728_76478811_76478873_76478953_76479046_76479467_76479536_76479654_76479738
ES.12151.19	chr15	+	2256	11	NNC	ENSMUSG00000022550.19	novel	2058	14	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_6	45.8711238144434	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3167	False	NA	NA	False	NA	NA	NA	76460622	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76478252_76478352_76478475_76478563_76478648_76478728_76478953_76479046_76479139_76479213_76479654_76479738
ES.12151.2	chr15	+	2434	10	NIC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	0	-10	intron_retention	FALSE	canonical	2	13	junction_4	44.7908720859755	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCGTCTGAAAGAAATC	3103	False	NA	NA	False	NA	NA	NA	76460558	76479998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.21	chr15	+	1897	15	NNC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	20	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.2348371855879	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTCGTCTGAAAGAAA	3177	False	NA	NA	False	NA	NA	NA	76460632	76479996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478600_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.22	chr15	+	2590	7	NIC	ENSMUSG00000022550.19	novel	2262	12	NA	NA	20	-1	intron_retention	FALSE	canonical	3	120	junction_4	20.3688214899363	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAATCGTTTTCTTT	3177	False	NA	NA	False	NA	NA	NA	76460632	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76478953_76479046_76479654_76479738
ES.12151.23	chr15	+	2267	11	NIC	ENSMUSG00000022550.19	novel	2058	14	NA	NA	28	0	intron_retention	FALSE	canonical	3	114	junction_8	15.2892118828931	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3185	False	NA	NA	False	NA	NA	NA	76460640	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478648_76478728_76478811_76478873_76478953_76479046_76479467_76479536
ES.12151.24	chr15	+	1977	14	NNC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	28	-1	intron_retention	FALSE	canonical	0	0	junction_8	50.2219924008403	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAATCGTTTTCTTT	3185	False	NA	NA	False	NA	NA	NA	76460640	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478599_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
ES.12151.26	chr15	+	2034	14	ISM	ENSMUSG00000022550.19	ENSMUST00000160784.8	1998	15	53	7	29	0	intron_retention	FALSE	canonical	3	114	junction_10	14.05231139782	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3186	False	NA	NA	False	NA	NA	NA	76460641	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536
ES.12151.28	chr15	+	1999	14	NIC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	-19	-10	intron_retention	FALSE	canonical	2	13	junction_4	37.69686000767	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCGTCTGAAAGAAATC	3199	False	NA	NA	False	NA	NA	NA	76460654	76479998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.29	chr15	+	211	1	FSM	ENSMUSG00000116238.2	ENSMUST00000230810.2	3039	1	2629	199	2629	-199	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGTGCACG	7198	False	NA	NA	False	NA	NA	NA	76464653	76464864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76464700_76464900
ES.12151.3	chr15	+	2102	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_10	18.314155291022	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3103	False	NA	NA	False	NA	NA	NA	76460558	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
ES.12151.30	chr15	+	5275	6	NIC	ENSMUSG00000022550.19	novel	2262	12	NA	NA	-3322	-13	intron_retention	FALSE	canonical	3	116	junction_1	20.350921355064	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACTCGTCTGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76474315	76479995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76478648_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.31	chr15	+	5363	5	NIC	ENSMUSG00000022550.19	novel	2262	12	NA	NA	-3316	-1	intron_retention	FALSE	canonical	3	116	junction_2	23.2647802482637	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAATCGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	76474321	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76477832_76477918_76478648_76478728_76479467_76479536_76479654_76479738
ES.12151.32	chr15	+	5234	5	NIC	ENSMUSG00000022550.19	novel	2058	14	NA	NA	-3212	-12	intron_retention	FALSE	canonical	3	116	junction_2	23.7315717979235	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTCGTCTGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76474425	76479996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76478252_76478352_76478648_76478728_76479467_76479536_76479654_76479738
ES.12151.33	chr15	+	1867	5	FSM	ENSMUSG00000022550.19	ENSMUST00000162139.8	1200	5	-685	18	170	-10	multi-exon	FALSE	canonical	3	133	junction_1	16.9263108798108	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCGTCTGAAAGAAATC	375	False	NA	NA	False	NA	NA	NA	76477807	76479998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.4	chr15	+	2255	12	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	116	junction_8	18.326695517606	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3103	False	NA	NA	False	AAGAAA	-1	NA	76460558	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478953_76479046_76479467_76479536_76479654_76479738
ES.12151.5	chr15	+	2257	12	NNC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	43.6210200296801	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3103	False	NA	NA	False	AAGAAA	-1	NA	76460558	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471962_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.6	chr15	+	2164	13	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	5	-10	intron_retention	FALSE	canonical	3	114	junction_9	18.6076074645709	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCGTCTGAAAGAAATC	3108	False	NA	NA	False	NA	NA	NA	76460563	76479998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479654_76479738
ES.12151.7	chr15	+	2150	13	NNC	ENSMUSG00000022550.19	novel	2026	15	NA	NA	-9	-10	intron_retention	FALSE	canonical	0	0	junction_8	53.0101536395518	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCGTCTGAAAGAAATC	3114	False	NA	NA	False	NA	NA	NA	76460569	76479998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478252_76478352_76478485_76478563_76478652_76478728_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.8	chr15	+	1998	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	35	7	4	0	multi-exon	FALSE	canonical	3	114	junction_10	17.9268638913668	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	3137	False	NA	NA	False	NA	NA	NA	76460592	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ES.12151.9	chr15	+	660	4	FSM	ENSMUSG00000022550.19	ENSMUST00000159949.8	747	4	-9	96	7	-96	multi-exon	FALSE	canonical	1	2	junction_3	73.1619208787376	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTGTAGATTGATTAT	3140	False	NA	NA	False	NA	NA	NA	76460595	76475927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76475620
ES.12152.1	chr15	-	177	1	Antisense	novelGene_ENSMUSG00000116238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCAGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	76462423	76462246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76462200_76462400
ES.12153.1	chr15	-	155	1	Intergenic	novelGene_10159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAATAAAA	7509	False	NA	NA	False	NA	NA	NA	76469769	76469614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76469600_76469800
ES.12154.1	chr15	-	3758	2	Antisense	novelGene_ENSMUSG00000116145.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATGTTCGGCTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	76478335	76474351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76475027_76475252
ES.12154.10	chr15	-	4609	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	32	0	intron_retention	FALSE	canonical	0	0	junction_35	138.323589854385	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491759	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484324_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491474
ES.12154.100	chr15	-	4375	36	NNC	ENSMUSG00000034022.9	novel	4340	37	NA	NA	-16	0	intron_retention	FALSE	canonical	2	11	junction_17	159.878841882322	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491727	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484324_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487770_76487923_76487952_76491534
ES.12154.101	chr15	-	4649	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	6	0	intron_retention	FALSE	canonical	3	484	junction_25	49.5911776222262	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491785	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.102	chr15	-	4400	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	1	0	intron_retention	FALSE	canonical	3	15	junction_30	133.691219011633	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491688	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.103	chr15	-	4359	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	104.98296452047	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491706	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485672_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.105	chr15	-	4298	36	NNC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	159.013473950981	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491763	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485381_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.106	chr15	-	4531	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-20	0	intron_retention	FALSE	canonical	3	484	junction_24	50.5193436381813	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491731	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.107	chr15	-	4247	37	FSM	ENSMUSG00000034022.9	ENSMUST00000231042.2	4340	37	88	5	88	0	multi-exon	FALSE	canonical	2	33	junction_35	100.244465842752	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491601	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487770_76487923_76487952_76491534
ES.12154.109	chr15	-	4518	38	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	136.251148459518	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491730	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76488825_76488892_76491534
ES.12154.11	chr15	-	4594	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	3	484	junction_23	45.6919124687499	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491703	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.110	chr15	-	5061	30	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-19	0	intron_retention	FALSE	canonical	3	484	junction_20	48.1676126257489	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491730	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.111	chr15	-	4518	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-7	0	intron_retention	FALSE	canonical	3	484	junction_24	48.797658023428	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491718	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.112	chr15	-	4403	36	NNC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	8	-1	intron_retention	FALSE	canonical	2	12	junction_16	159.228763681922	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACGAGTGTGTGGTCA	NA	False	NA	-8	True	TATAAA	-21	NA	76491703	76480011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484107_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.113	chr15	-	4520	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	104.957498011761	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACGAGTGTGTGGTCA	NA	False	NA	-8	True	TATAAA	-21	NA	76491794	76480011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486623_76486694_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.116	chr15	-	4407	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-7	0	intron_retention	FALSE	canonical	1	5	junction_21	106.021346678662	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCAGACGAGTGTGT	NA	False	NA	-13	True	TATAAA	-16	NA	76491696	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.117	chr15	-	4346	35	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-15	0	intron_retention	FALSE	canonical	2	6	junction_3	160.786542607698	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCAGACGAGTGTGT	NA	False	NA	-13	True	TATAAA	-16	NA	76491806	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.118	chr15	-	4653	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	3	484	junction_23	48.0496157209842	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCAGACGAGTGTGT	NA	False	NA	-13	True	TATAAA	-16	NA	76491783	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.119	chr15	-	4406	36	NNC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	135.232148091905	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCAGACGAGTGTGT	NA	False	NA	-13	True	TATAAA	-16	NA	76491717	76480016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487872_76491534
ES.12154.12	chr15	-	4424	37	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	102.623126890772	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491759	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.121	chr15	-	4405	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	1	-1	intron_retention	FALSE	canonical	3	15	junction_30	133.178278550036	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTCAGACGAGTGTG	NA	False	NA	-14	True	TATAAA	-15	NA	76491710	76480017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.123	chr15	-	4393	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	105.014385797803	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTTCAGACGAGTGT	NA	False	NA	-15	True	TATAAA	-14	NA	76491727	76480018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.124	chr15	-	4726	33	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	484	junction_21	50.3596052779408	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTTCAGACGAGTGT	NA	False	NA	-15	True	TATAAA	-14	NA	76491719	76480018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.125	chr15	-	4458	36	NNC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_29	134.739494687235	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTTCAGACGAGTGT	NA	False	NA	-15	True	TATAAA	-14	NA	76491697	76480018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480108_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486702_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.126	chr15	-	4677	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	484	junction_22	44.6033843070648	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCTTTCAGACGAGTG	NA	False	NA	-16	True	TATAAA	-13	NA	76491730	76480019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.127	chr15	-	4555	34	NNC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-23	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	164.028256877217	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCTTTCAGACGAGTG	NA	False	NA	-16	True	TATAAA	-13	NA	76491734	76480019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480108_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482174_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76491516
ES.12154.128	chr15	-	4599	34	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	2	-18	intron_retention	FALSE	canonical	3	40	junction_1	100.758920018374	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491709	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.129	chr15	-	4414	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-13	-18	intron_retention	FALSE	canonical	0	0	junction_30	105.807040389184	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491724	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486775_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.13	chr15	-	5901	20	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	484	junction_11	50.2880897107755	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491722	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480899_76480976_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482293_76483002_76483156_76483233_76483378_76483467_76484327_76484412_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.130	chr15	-	4434	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	6	-18	intron_retention	FALSE	canonical	3	40	junction_1	100.215221459841	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491683	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.131	chr15	-	4380	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-3	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	106.044942340115	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491692	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76491516
ES.12154.133	chr15	-	4464	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	1	-18	intron_retention	FALSE	canonical	3	15	junction_29	105.036181770706	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491688	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.134	chr15	-	6635	33	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	1562	-18	intron_retention	FALSE	canonical	0	0	junction_17	109.528659919448	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76490127	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484663_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711
ES.12154.135	chr15	-	8455	31	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	7	-18	intron_retention	FALSE	canonical	0	0	junction_24	109.371339938761	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAAGAAAACGATT	NA	False	NA	-31	True	NA	NA	NA	76491704	76480034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486117_76486210_76486327_76486422_76486520_76486632_76486708_76487386_76487501_76487583_76487711_76487846_76487923
ES.12154.137	chr15	-	3616	30	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-58	20	combination_of_known_junctions	FALSE	canonical	3	15	junction_24	109.979178658538	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACTGCGCTGTGCCACT	NA	False	NA	NA	False	NA	NA	NA	76491849	76481443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.14	chr15	-	4436	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	104.863502548154	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491717	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486411_76486516_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.15	chr15	-	4497	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	105.009200067258	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491780	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483854_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.17	chr15	-	4412	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	165.7923313753	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491702	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485822_76485922_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486843_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76491516
ES.12154.18	chr15	-	4475	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_10	104.442019849312	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491703	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482081_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.19	chr15	-	4469	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	103.858477426416	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491749	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480766_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.2	chr15	-	6479	37	NNC	ENSMUSG00000034022.9	novel	646	8	NA	NA	-8	3085	intron_retention	TRUE	canonical	0	0	junction_1	104.619368146429	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAATAAGGGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	76491697	76476917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76479100_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.20	chr15	-	4509	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	40	junction_1	99.7317381370481	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491730	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.21	chr15	-	4321	35	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_28	140.169904316599	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491694	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486623_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.22	chr15	-	4582	35	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	1	junction_18	106.640184230587	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76491727	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484801_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.23	chr15	-	4019	31	NIC	ENSMUSG00000034022.9	novel	4340	37	NA	NA	-354	-1	intron_retention	FALSE	canonical	3	484	junction_24	50.9688357942598	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTGTGTGGTCATTGTG	NA	False	NA	-3	True	TATAAA	-26	NA	76487249	76480006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233
ES.12154.24	chr15	-	4453	38	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	136.251148459518	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491709	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76488825_76488845_76491534
ES.12154.25	chr15	-	4332	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	138.134596197573	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491702	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486756_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487844_76487923_76487952_76491534
ES.12154.26	chr15	-	8242	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-7	1	intron_retention	FALSE	canonical	3	484	junction_25	49.1648339762088	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491696	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487386_76487501_76487583_76487711_76487846_76487923
ES.12154.27	chr15	-	4470	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-9	1	intron_retention	FALSE	canonical	3	40	junction_1	100.169652009346	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491698	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.28	chr15	-	4557	34	NIC	ENSMUSG00000034022.9	novel	4340	37	NA	NA	7	1	intron_retention	FALSE	canonical	2	33	junction_32	103.318793965133	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491704	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487770_76487923_76487952_76491534
ES.12154.29	chr15	-	4403	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	32	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_22	104.867340882057	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491759	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.3	chr15	-	4587	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	484	junction_24	50.199650376862	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTCATTGTGTTTA	NA	False	NA	1	True	TATAAA	-30	NA	76491791	76480002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.30	chr15	-	4475	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	106.044942340115	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491752	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487872_76491534
ES.12154.31	chr15	-	4470	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	104.881944214542	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491754	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484801_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.32	chr15	-	4821	31	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-6	1	intron_retention	FALSE	canonical	3	15	junction_25	109.843201377641	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491717	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.34	chr15	-	4494	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	102.884910380243	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491786	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480225_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.36	chr15	-	4603	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-15	1	intron_retention	FALSE	canonical	3	484	junction_25	49.9994775482908	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491806	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.37	chr15	-	4264	36	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	163.412321869483	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491697	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480850_76480899_76480976_76481044_76481116_76481294_76481386_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487134_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.39	chr15	-	4534	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-5	1	intron_retention	FALSE	canonical	3	15	junction_29	104.602179312646	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491716	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.4	chr15	-	4563	37	FSM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	-148	-5	-68	-1	multi-exon	FALSE	canonical	3	40	junction_1	98.8724822532214	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGGTCATTGTGTTT	NA	False	NA	0	True	TATAAA	-29	NA	76491859	76480003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.40	chr15	-	4570	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	9	1	intron_retention	FALSE	canonical	3	484	junction_23	50.6718273110906	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491702	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.42	chr15	-	4149	33	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	193	1	intron_retention	FALSE	canonical	3	40	junction_1	103.243568201608	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76487584	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501
ES.12154.48	chr15	-	4620	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-25	1	intron_retention	FALSE	canonical	3	15	junction_28	105.732401275685	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491736	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.5	chr15	-	4446	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	105.02666842401	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGGTCATTGTGTTT	NA	False	NA	0	True	TATAAA	-29	NA	76491774	76480003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484753_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.50	chr15	-	4752	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-30	1	intron_retention	FALSE	canonical	3	484	junction_23	48.649247797831	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491741	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.54	chr15	-	4456	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	1	intron_retention	FALSE	canonical	3	15	junction_30	101.015189805438	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGTGTGTGGTCATTGT	NA	False	NA	-4	True	TATAAA	-25	NA	76491703	76480007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.55	chr15	-	4543	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	104.985081244673	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491786	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487879_76487923_76487952_76491534
ES.12154.58	chr15	-	3422	21	NIC	ENSMUSG00000034022.9	novel	4340	37	NA	NA	24	0	intron_retention	FALSE	canonical	3	486	junction_18	43.5631438259453	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76485702	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603
ES.12154.59	chr15	-	4441	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-1	0	intron_retention	FALSE	canonical	3	15	junction_30	103.599164759063	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491712	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.6	chr15	-	4426	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	106.102322581284	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491774	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.60	chr15	-	4440	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_30	104.023607995532	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.62	chr15	-	4449	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_23	103.362839276066	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491731	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485381_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.63	chr15	-	4229	37	NNC	ENSMUSG00000034022.9	novel	4340	37	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_31	133.785653491871	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491696	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486734_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487770_76487923_76487952_76491534
ES.12154.64	chr15	-	4449	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	104.957498011761	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491728	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486623_76486702_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.65	chr15	-	3308	26	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	162.280990876935	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491734	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480766_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76487697_76487846_76487923_76487952_76491534
ES.12154.66	chr15	-	4465	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.541178607721	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491749	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480623_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.67	chr15	-	4788	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	3	484	junction_23	49.212867586518	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491783	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.68	chr15	-	4461	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.957498011761	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491731	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481110_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.7	chr15	-	4603	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	-85	0	-85	0	multi-exon	FALSE	canonical	3	484	junction_25	49.8187687746518	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491876	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.70	chr15	-	4612	35	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_23	107.036309849964	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491730	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485719_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.72	chr15	-	4438	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_30	104.075623996227	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491703	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.74	chr15	-	4416	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	105.01652941617	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491698	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487239_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.76	chr15	-	5098	30	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-1	0	intron_retention	FALSE	canonical	3	484	junction_22	52.1291499629724	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491712	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487386_76487501_76487952_76491534
ES.12154.77	chr15	-	4415	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	104.796934003544	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491683	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486982_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.78	chr15	-	4573	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	3	484	junction_24	49.9440503289962	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491783	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.8	chr15	-	4778	33	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_9	143.354333187909	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491703	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482081_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484663_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.80	chr15	-	4669	35	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-6	0	intron_retention	FALSE	canonical	3	484	junction_23	49.3296937464759	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491797	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.81	chr15	-	4585	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	9	0	intron_retention	FALSE	canonical	3	15	junction_28	105.503550090631	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491702	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.83	chr15	-	3417	15	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-75	0	intron_retention	FALSE	canonical	3	40	junction_1	143.808209155139	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76485291	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76481294_76481388_76481542_76481630_76481931_76482009_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137
ES.12154.84	chr15	-	4749	32	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_26	108.617257546104	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491718	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.85	chr15	-	4631	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-5	0	intron_retention	FALSE	canonical	3	484	junction_22	47.6432063864745	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491694	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.86	chr15	-	5477	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	1588	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	162.330044076494	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76490101	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484663_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76488825
ES.12154.88	chr15	-	4817	32	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-20	0	intron_retention	FALSE	canonical	3	484	junction_21	50.5394623325338	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491731	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480899_76480976_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.89	chr15	-	4678	34	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	-25	0	intron_retention	FALSE	canonical	3	484	junction_22	49.9926900074215	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491736	76480008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.9	chr15	-	4745	34	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-19	0	intron_retention	FALSE	canonical	3	40	junction_1	102.374463427982	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491730	76480005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.91	chr15	-	4560	34	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_24	142.265069016463	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACGAGTGTGTGGTCATT	NA	False	NA	-6	True	TATAAA	-23	NA	76491703	76480009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485538_76485603_76485699_76485773_76485826_76485926_76486016_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.94	chr15	-	4542	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-33	0	intron_retention	FALSE	canonical	3	484	junction_24	49.5574373009414	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491744	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.95	chr15	-	4741	32	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-5	0	intron_retention	FALSE	canonical	3	15	junction_26	108.476374521572	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491716	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484993_76485137_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486788_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.96	chr15	-	4537	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	17	0	intron_retention	FALSE	canonical	3	40	junction_1	99.7426320740596	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491774	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480108_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.97	chr15	-	4507	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	4	0	intron_retention	FALSE	canonical	3	484	junction_25	50.5235124088028	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491707	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487952_76491534
ES.12154.98	chr15	-	4709	34	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_24	108.910127986159	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491693	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485922_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12154.99	chr15	-	4499	36	NIC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	7	0	intron_retention	FALSE	canonical	3	484	junction_24	50.5087262616216	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACGAGTGTGTGGTCAT	NA	False	NA	-7	True	TATAAA	-22	NA	76491704	76480010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ES.12155.10	chr15	-	2357	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-46	-2	intron_retention	FALSE	canonical	3	334	junction_10	39.3008905751511	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8620	False	NA	-4	True	AATAAA	-19	NA	76501094	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.11	chr15	-	2811	9	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	377	junction_8	34.4363089630698	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8668	False	NA	-4	True	AATAAA	-19	NA	76501046	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074
ES.12155.12	chr15	-	1761	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8644	False	NA	-4	True	AATAAA	-19	NA	76501070	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
ES.12155.13	chr15	-	1980	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-45	-2	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8621	False	NA	-4	True	AATAAA	-19	NA	76501093	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
ES.12155.14	chr15	-	2054	11	FSM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	7	2	7	-2	multi-exon	FALSE	canonical	3	24	junction_5	124.203099800287	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8673	False	NA	-4	True	AATAAA	-19	NA	76501041	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.17	chr15	-	3396	9	ISM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	538	-6	2	-2	intron_retention	FALSE	canonical	3	380	junction_6	33.4250560956897	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8668	False	NA	-4	True	AATAAA	-19	NA	76501046	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949
ES.12155.18	chr15	-	2714	3	NIC	ENSMUSG00000063354.8	novel	2063	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	43	junction_2	205	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8666	False	NA	-4	True	AATAAA	-19	NA	76501048	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76499114_76500772
ES.12155.19	chr15	-	2374	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-49	-3	intron_retention	FALSE	canonical	3	377	junction_9	35.1518750707221	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTACACTGTCTTCTTGT	9035	False	NA	-5	True	AATAAA	-18	NA	76500679	76496585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074
ES.12155.2	chr15	-	3230	8	ISM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	11	0	11	0	intron_retention	FALSE	canonical	3	24	junction_5	147.510774424882	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8677	False	NA	-2	True	AATAAA	-21	NA	76501037	76496582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76498256_76498430_76498686_76498859_76498949
ES.12155.20	chr15	-	3908	5	ISM	ENSMUSG00000063354.8	ENSMUST00000073428.7	2063	11	17	3	17	-3	intron_retention	FALSE	canonical	3	435	junction_4	9.65660395791398	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTACACTGTCTTCTTGT	8683	False	NA	-5	True	AATAAA	-18	NA	76501031	76496585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797
ES.12155.21	chr15	-	3046	8	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	4	intron_retention	FALSE	canonical	3	377	junction_7	34.8466026218585	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTACACTGTCTTCTTG	8668	False	NA	-6	True	AATAAA	-17	NA	76501046	76496586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256_76499114_76499243_76499440_76500074
ES.12155.22	chr15	-	2001	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	15	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	137.423109814584	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTACACTGTCTTCTT	9099	False	NA	-7	True	AATAAA	-16	NA	76500615	76496587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500074
ES.12155.24	chr15	-	4459	1	NIC	ENSMUSG00000063354.8	novel	2063	11	NA	NA	2	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTACACTGTCTTCTT	8668	False	NA	-7	True	AATAAA	-16	NA	76501046	76496587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496600_76501000
ES.12155.25	chr15	-	3362	9	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	11	0	intron_retention	FALSE	canonical	3	379	junction_8	33.5968748546647	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTACACTGTCTT	8677	False	NA	-10	True	AATAAA	-13	NA	76501037	76496590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498430_76498686_76498859_76498949_76499114_76499243
ES.12155.26	chr15	-	2453	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	334	junction_9	42.9740087971644	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTACACTGTCTT	8668	False	NA	-10	True	AATAAA	-13	NA	76501046	76496590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498430_76498686_76498859_76498949_76499440_76500074_76500360_76500772
ES.12155.28	chr15	-	3263	6	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	377	junction_5	36.5480505636074	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTACACTGTCTT	8644	False	NA	-10	True	AATAAA	-13	NA	76501070	76496590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76499114_76499243_76499440_76500074
ES.12155.3	chr15	-	2606	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-37	0	intron_retention	FALSE	canonical	3	334	junction_9	42.8070606844764	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8629	False	NA	-2	True	AATAAA	-21	NA	76501085	76496582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497557_76497656_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.30	chr15	-	2457	8	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	154.006890913944	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTACACTGTCTT	8668	False	NA	-10	True	AATAAA	-13	NA	76501046	76496590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497557_76497656_76497712_76497797_76498430_76498686_76498859_76498949_76499114_76500074_76500360_76500772
ES.12155.31	chr15	-	2197	13	NNC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.640056233502	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTACACTGTCTT	8621	False	NA	-10	True	AATAAA	-13	NA	76501093	76496590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500146_76500207_76500360_76500772
ES.12155.32	chr15	-	2067	12	NNC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	136	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	123.503002941375	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCCAACTACACTGTC	8802	False	NA	-12	True	AATAAA	-11	NA	76500912	76496592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497703_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.33	chr15	-	2208	12	NNC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	123.474961493019	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCCAACTACACTGTC	8691	False	NA	-12	True	AATAAA	-11	NA	76501023	76496592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500381_76500772
ES.12155.34	chr15	-	220	1	Intergenic	novelGene_10160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAACTGTAAAAAAA	8476	False	NA	NA	False	NA	NA	NA	76503796	76503576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76503600_76503800
ES.12155.4	chr15	-	2980	6	NIC	ENSMUSG00000063354.8	novel	2063	11	NA	NA	395	0	intron_retention	FALSE	canonical	3	379	junction_5	31.052214091752	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	9479	False	NA	-2	True	AATAAA	-21	NA	76500235	76496582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76498859_76498949_76499114_76499243
ES.12155.5	chr15	-	3448	8	NIC	ENSMUSG00000063354.8	novel	2063	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	379	junction_7	31.321896885243	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8668	False	NA	-2	True	AATAAA	-21	NA	76501046	76496582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498430_76498686_76498859_76498949_76499114_76499243
ES.12155.6	chr15	-	2811	2	NIC	ENSMUSG00000063354.8	novel	2063	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	43	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8662	False	NA	-2	True	AATAAA	-21	NA	76501052	76496582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76499114_76500772
ES.12155.7	chr15	-	3276	12	NNC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-604	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	124.865613711715	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACTGTCTTCTTGTAG	10000	False	NA	-3	True	AATAAA	-20	NA	76502188	76496583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498345_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.8	chr15	-	2363	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	-43	-2	intron_retention	FALSE	canonical	3	334	junction_10	39.7422948507003	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8623	False	NA	-4	True	AATAAA	-19	NA	76501091	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76496864_76496954_76497143_76497403_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12155.9	chr15	-	2275	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	481	-6	-55	-2	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACTGTCTTCTTGTA	8611	False	NA	-4	True	AATAAA	-19	NA	76501103	76496584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ES.12156.1	chr15	-	5301	35	Fusion	ENSMUSG00000115987.2_ENSMUSG00000059323.15	novel	4235	26	NA	NA	0	-1	multi-exon	TRUE	canonical	3	178	junction_30	361.305352795219	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCGCCCTGTGTGATC	NA	False	NA	-4	True	AATAAA	-38	NA	76524129	76506287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.10	chr15	-	2102	7	NIC	ENSMUSG00000115987.2	novel	941	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	892	junction_6	86.1645712188794	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9622	False	NA	-25	True	AATAAA	-17	NA	76510255	76506308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76509406_76510188
ES.12156.12	chr15	-	6569	32	Fusion	ENSMUSG00000115987.2_ENSMUSG00000059323.15	novel	4235	26	NA	NA	8	0	intron_retention	FALSE	canonical	3	182	junction_20	359.005963735867	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	False	NA	-25	True	AATAAA	-17	NA	76524121	76506308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76509406_76510188_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.13	chr15	-	984	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	892	junction_8	90.8638232466585	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGGCAGCTATAC	9621	False	NA	-26	True	AATAAA	-16	NA	76510256	76506309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12156.14	chr15	-	898	10	NNC	ENSMUSG00000115987.2	novel	911	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	333.825007754765	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGGCAGCTATAC	9612	False	NA	-26	True	AATAAA	-16	NA	76510265	76506309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76506544_76506666_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12156.15	chr15	-	1491	10	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	421.389969236145	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTGGGCAGCTATAC	9601	False	NA	-26	True	AATAAA	-16	NA	76510276	76506309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508004_76508113_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ES.12156.16	chr15	-	886	9	NNC	ENSMUSG00000115987.2	novel	941	10	NA	NA	948	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	354.399492098959	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTGTGGGCAGCTATA	9291	False	NA	-27	True	AATAAA	-15	NA	76509258	76506310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509221
ES.12156.18	chr15	-	1565	9	NIC	ENSMUSG00000115987.2	novel	941	10	NA	NA	11	-3	intron_retention	FALSE	canonical	3	74	junction_7	328.490772320928	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGCAGCTAT	9635	False	NA	-28	True	AATAAA	-14	NA	76510242	76506311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ES.12156.19	chr15	-	1925	8	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	8	-10	intron_retention	FALSE	canonical	3	892	junction_7	91.9012335863555	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAACCTTCCTGCTGTGGG	9632	False	NA	-35	True	AATAAA	-7	NA	76510245	76506318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76507473_76507588_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12156.2	chr15	-	884	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	331.20912483656	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCGCCCTGTGTGATC	9622	False	NA	-4	True	AATAAA	-38	NA	76510255	76506287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509333_76509406_76510188
ES.12156.20	chr15	-	4304	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	-68	-1	-68	1	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524226	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.21	chr15	-	7218	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	39	1	intron_retention	FALSE	canonical	3	182	junction_11	25.7680370912724	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524090	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.22	chr15	-	4637	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-11	1	intron_retention	FALSE	canonical	3	21	junction_21	46.3465209050259	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524140	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.23	chr15	-	4714	24	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-11	1	intron_retention	FALSE	canonical	3	182	junction_12	25.5909364862982	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524140	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.24	chr15	-	4413	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_22	45.7890816680134	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524174	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.25	chr15	-	4107	26	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	48.7290303617874	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524138	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517595_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.26	chr15	-	4115	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.4156321422408	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524090	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516066_76516160_76516277_76516817_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.28	chr15	-	4315	27	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_23	58.9711091635246	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524152	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76522964_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.29	chr15	-	5643	22	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	28	1	intron_retention	FALSE	canonical	1	2	junction_13	50.3403833419188	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524101	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519023_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.3	chr15	-	2014	8	NIC	ENSMUSG00000115987.2	novel	941	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	892	junction_7	97.0594179471776	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCCCGCCCTGTGTGA	9623	False	NA	-6	True	AATAAA	-36	NA	76510254	76506289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76508686_76508791_76509406_76510188
ES.12156.30	chr15	-	4301	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	21	1	intron_retention	FALSE	canonical	3	18	junction_20	46.6088928090862	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524108	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522638_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.31	chr15	-	4288	27	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	60.8922804835326	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCAGCTCTCTGCGA	NA	False	NA	0	True	AATAAA	-17	NA	76524125	76510436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512319_76512405_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.32	chr15	-	5149	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	3	0	intron_retention	FALSE	canonical	2	8	junction_21	59.8717234083744	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524126	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522414_76522671_76522802_76522878_76522964_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.33	chr15	-	5035	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	2	0	intron_retention	FALSE	canonical	3	182	junction_11	24.1801520273574	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524127	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.34	chr15	-	5259	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	182	junction_12	26.1571853819832	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524160	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.35	chr15	-	5042	24	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-23	0	intron_retention	FALSE	canonical	3	182	junction_12	25.6377999522076	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524181	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.36	chr15	-	4594	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	9	0	intron_retention	FALSE	canonical	3	18	junction_20	45.4750962066052	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524149	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522638_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.37	chr15	-	5330	23	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	4	0	intron_retention	FALSE	canonical	3	21	junction_19	45.9511058869251	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524125	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.38	chr15	-	4520	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	21	0	intron_retention	FALSE	canonical	3	178	junction_20	24.2598419317925	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524108	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.39	chr15	-	4969	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	28	0	intron_retention	FALSE	canonical	3	178	junction_18	23.309452557115	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524101	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.4	chr15	-	2791	4	NIC	ENSMUSG00000115987.2	novel	2148	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	892	junction_3	114.590090709838	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGAGCCCCCGCCCTGT	9622	False	NA	-10	True	AATAAA	-32	NA	76510255	76506293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76507473_76507588_76508376_76508647_76509406_76510188
ES.12156.40	chr15	-	3289	3	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-1155	0	intron_retention	FALSE	canonical	3	236	junction_2	7	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	8507	False	NA	-1	True	AATAAA	-16	NA	76514735	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76513083_76513456_76514042_76514676
ES.12156.41	chr15	-	4223	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.6937263643061	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524108	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516158_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521529_76522051_76522167_76522241_76522414_76522638_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.42	chr15	-	4787	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-26	0	intron_retention	FALSE	canonical	3	178	junction_20	26.216513031972	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524184	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.43	chr15	-	5645	20	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-7	0	intron_retention	FALSE	canonical	3	182	junction_11	26.6181576332674	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524136	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521294_76521379_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.44	chr15	-	6179	20	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	11	0	intron_retention	FALSE	canonical	3	182	junction_10	24.6049113400122	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524118	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521294_76521379_76522167_76522241_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.45	chr15	-	5224	24	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	4	0	intron_retention	FALSE	canonical	3	21	junction_20	46.2350369194337	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524125	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522414_76522671_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.46	chr15	-	4354	26	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	49.2465795766569	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524108	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521057_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.47	chr15	-	4676	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_6	60.735980892713	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524101	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516158_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.5	chr15	-	1023	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	-68	-14	0	-1	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGAGCCCCCGCCCTG	9603	False	NA	-11	True	AATAAA	-31	NA	76510274	76506294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ES.12156.50	chr15	-	5927	21	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	10	0	intron_retention	FALSE	canonical	3	182	junction_10	23.9877051841146	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524119	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.55	chr15	-	4947	23	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	4	0	intron_retention	FALSE	canonical	2	8	junction_21	63.1856113969257	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76523834	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76522878_76522964_76523039_76523224_76523647
ES.12156.56	chr15	-	4144	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	47.7684664699307	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524141	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.57	chr15	-	4867	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	26	0	intron_retention	FALSE	canonical	3	21	junction_21	46.7154321099808	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524103	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522414_76522671_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.59	chr15	-	4286	19	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	136	0	intron_retention	FALSE	canonical	3	182	junction_12	24.9822158967356	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	-13	True	NA	-1	True	AATAAA	-16	NA	76522343	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521294_76521379_76522167_76522241
ES.12156.6	chr15	-	945	10	NNC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	425.10129511813	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGAGCCCCCGCCCTG	9606	False	NA	-11	True	AATAAA	-31	NA	76510271	76506294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508378_76508647_76508686_76508791_76508842_76509333_76509406_76510188
ES.12156.60	chr15	-	4093	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	61.1116224625071	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76523898	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76522917_76523039_76523224_76523647_76523791_76523877
ES.12156.62	chr15	-	4951	24	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	9	0	intron_retention	FALSE	canonical	3	21	junction_20	45.9248996549539	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524120	76510437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.63	chr15	-	4464	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	27	0	intron_retention	FALSE	canonical	3	18	junction_20	46.8499192161049	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCAGCTCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	76524102	76510438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522638_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.65	chr15	-	3603	21	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	51.7546857781979	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCAGCTCTCTGC	-33	True	NA	-2	True	AATAAA	-15	NA	76522469	76510438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519023_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241
ES.12156.66	chr15	-	4554	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-6	0	intron_retention	FALSE	canonical	2	8	junction_22	59.9839978660976	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCAGCTCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	76524135	76510438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76522878_76522964_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.68	chr15	-	4201	25	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_7	72.1127107766416	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCAGCTCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	76523878	76510438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516066_76516158_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76522878_76522964_76523039_76523224_76523647
ES.12156.69	chr15	-	4107	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.0659311539076	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524108	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517628_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.7	chr15	-	2027	7	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	20	-3	intron_retention	FALSE	canonical	3	892	junction_6	99.2310715227622	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATACTGAGCCCCCGCCC	9644	False	NA	-13	True	AATAAA	-29	NA	76510233	76506296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76507473_76507588_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12156.70	chr15	-	4493	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	182	junction_12	25.1047458439413	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524160	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.72	chr15	-	3982	24	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	63	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	48.8408936471225	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76523775	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513900_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647
ES.12156.73	chr15	-	5147	24	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	2	-1	intron_retention	FALSE	canonical	3	21	junction_20	47.3313541835312	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524127	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522802_76522878_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.76	chr15	-	4334	26	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.4897181471728	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524148	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517628_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76521057_76521140_76521294_76521379_76521529_76522051_76522167_76522241_76522414_76522671_76522817_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.77	chr15	-	2239	2	ISM	ENSMUSG00000059323.15	ENSMUST00000163990.2	502	3	-1364	1	-1364	-1	intron_retention	FALSE	canonical	3	238	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	8298	False	NA	-3	True	AATAAA	-14	NA	76514944	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76510683_76512948
ES.12156.8	chr15	-	1606	8	FSM	ENSMUSG00000115987.2	ENSMUST00000229261.2	1631	8	24	1	7	0	multi-exon	FALSE	canonical	3	892	junction_7	94.9343489588721	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9615	False	NA	-25	True	AATAAA	-17	NA	76510262	76506308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12156.81	chr15	-	5634	22	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	13	-1	intron_retention	FALSE	canonical	3	182	junction_10	23.2438517460194	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524145	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.82	chr15	-	4992	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	10	-1	intron_retention	FALSE	canonical	3	178	junction_18	23.6599532634735	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTCAGCTCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	76524119	76510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76510683_76512948_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.84	chr15	-	4122	22	NNC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	-668	-4	intron_retention	FALSE	canonical	0	0	junction_7	75.9502164193734	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATTTGTGTCAGCTCT	95	False	NA	-6	True	AATAAA	-11	NA	76523147	76510442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516158_76516312_76516806_76516884_76516972_76517595_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76522878
ES.12156.85	chr15	-	6204	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	12	-848	intron_retention	FALSE	canonical	3	182	junction_10	23.6304625500767	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGGACCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	76524117	76511286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76513083_76513456_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.86	chr15	-	6215	23	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	2	-855	intron_retention	FALSE	canonical	3	178	junction_18	26.2555779197645	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCATGATTTGGACCTT	NA	False	NA	NA	False	NA	NA	NA	76524127	76511293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ES.12156.9	chr15	-	1454	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	-20	0	intron_retention	FALSE	canonical	3	892	junction_8	91.0971322270904	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9651	False	NA	-25	True	AATAAA	-17	NA	76510226	76506308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ES.12157.1	chr15	+	169	1	Intergenic	novelGene_10161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGATTTTTTAA	3671	False	NA	NA	False	NA	NA	NA	76524603	76524772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76524600_76524800
ES.12158.1	chr15	+	752	2	Antisense	novelGene_ENSMUSG00000053929.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCCTTACGTTTATTGG	1754	False	NA	NA	False	AATAAA	-19	NA	76540801	76542341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76541271_76542058
ES.12158.10	chr15	+	3388	16	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	24	-1	intron_retention	FALSE	canonical	2	3	junction_4	4.59274790657329	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5034	False	NA	NA	False	ATTAAA	-17	NA	76544081	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.12	chr15	+	3322	19	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4.46280927966529	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5034	False	NA	NA	False	ATTAAA	-17	NA	76544081	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.13	chr15	+	4297	14	NIC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	24	0	intron_retention	FALSE	canonical	2	9	junction_9	3.09226942188335	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGGTGTTTTAA	5034	False	NA	NA	False	ATTAAA	-19	NA	76544081	76552396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76544966_76545205_76545288_76545435_76545585_76545679_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550771_76550862_76551332_76551403
ES.12158.14	chr15	+	3494	17	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	30	-5	intron_retention	FALSE	canonical	2	7	junction_1	4.42250989258362	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAAGGCTGTGCCTGGTG	5040	False	NA	NA	False	ATTAAA	-13	NA	76544087	76552390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.15	chr15	+	3254	17	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	33	-3	intron_retention	FALSE	canonical	2	3	junction_4	5.41410195692693	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGCCTGGTGTT	5043	False	NA	NA	False	ATTAAA	-15	NA	76544090	76552392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76551332_76551403
ES.12158.16	chr15	+	3427	18	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	71	-1	intron_retention	FALSE	canonical	0	0	junction_11	6.02934002826765	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5081	False	NA	NA	False	ATTAAA	-17	NA	76544128	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544334_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548442_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.17	chr15	+	3139	18	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	-19	-1	intron_retention	FALSE	canonical	0	0	junction_1	5.59411455433823	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5470	False	NA	NA	False	ATTAAA	-17	NA	76544517	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544547_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76547041_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.18	chr15	+	3596	18	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	6.36056187807683	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGGTGTTTTAA	5470	False	NA	NA	False	ATTAAA	-19	NA	76544517	76552396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76545053_76545205_76545288_76545392_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.19	chr15	+	3323	17	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_13	4.94303487242403	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5479	False	NA	NA	False	ATTAAA	-17	NA	76544526	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546310_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.2	chr15	+	1775	2	Antisense	novelGene_ENSMUSG00000053929.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTCACCTGTACAGAG	2270	False	NA	NA	False	NA	NA	NA	76541317	76543408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76541743_76542058
ES.12158.20	chr15	+	3175	18	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.47596194011154	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5756	False	NA	NA	False	ATTAAA	-17	NA	76544803	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546797_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.21	chr15	+	1387	3	ISM	ENSMUSG00000004187.12	ENSMUST00000230124.2	3193	17	5953	3	2584	-3	3prime_fragment	FALSE	canonical	2	12	junction_1	4	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGCCTGGTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	76550851	76552392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76550993_76551074_76551332_76551403
ES.12158.3	chr15	+	3586	18	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	-2731	-1	intron_retention	FALSE	canonical	0	0	junction_1	4.75416408262982	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	2279	False	NA	NA	False	ATTAAA	-17	NA	76541326	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76541743_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.4	chr15	+	3270	18	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.39420152550644	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5024	False	NA	NA	False	ATTAAA	-17	NA	76544071	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545823_76545926_76546073_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.5	chr15	+	3222	19	NNC	ENSMUSG00000004187.12	novel	3218	18	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	5.5633278964978	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGGTGTTTTAA	5028	False	NA	NA	False	ATTAAA	-19	NA	76544075	76552396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548538_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.6	chr15	+	3440	18	NIC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	19	-1	intron_retention	FALSE	canonical	1	1	junction_1	5.10037653810479	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5029	False	NA	NA	False	ATTAAA	-17	NA	76544076	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76544334_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.7	chr15	+	3278	19	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.84575397242929	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGCCTGGTGTTT	5030	False	NA	NA	False	ATTAAA	-16	NA	76544077	76552393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544334_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76547032_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.8	chr15	+	3313	17	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_13	4.5753244420478	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGCCTGGTGTTTT	5030	False	NA	NA	False	ATTAAA	-17	NA	76544077	76552394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ES.12158.9	chr15	+	3367	18	NNC	ENSMUSG00000004187.12	novel	3009	19	NA	NA	23	-2	intron_retention	FALSE	canonical	1	1	junction_9	4.66674905183499	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGCCTGGTGTTT	5033	False	NA	NA	False	ATTAAA	-16	NA	76544080	76552393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76544330_76544907_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76547032_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550771_76550862_76550993_76551074_76551332_76551403
ES.12159.1	chr15	+	3011	11	NNC	ENSMUSG00000033819.17	novel	2382	9	NA	NA	-2719	-1	intron_retention	FALSE	canonical	2	3	junction_1	36.8902426123765	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76553095	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76553564_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.10	chr15	+	2895	8	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	25	6	intron_retention	FALSE	canonical	3	82	junction_1	18.9650591717441	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTCACTGGTTAG	NA	False	NA	28	True	GATAAA	-23	NA	76555871	76579125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577925_76578067_76578231_76578497
ES.12159.11	chr15	+	3719	7	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	25	0	intron_retention	FALSE	canonical	3	82	junction_1	18.1605494287908	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555871	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.12	chr15	+	2431	9	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	41.5389500950614	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555871	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577794_76577925_76578067_76578231_76578497
ES.12159.13	chr15	+	2926	12	NNC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.4967463397983	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555872	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76573527_76573695_76574371_76575353_76575770_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.14	chr15	+	2556	10	NNC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.5547945134073	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555872	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577378_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.15	chr15	+	6325	20	Fusion	ENSMUSG00000033819.17_ENSMUSG00000022546.6	novel	2827	12	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_15	54.6358379842734	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTTGACTCACCTGAC	NA	False	NA	26	True	AATAAA	-42	NA	76555873	76583872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497_76581220_76581358_76581449_76581521_76581631_76581741_76581876_76582039_76582284_76582507_76582583_76582655_76582793_76582914_76583352_76583435_76583549_76583619
ES.12159.16	chr15	+	4267	12	NNC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.4935402306078	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCATGTGTCTCACTG	NA	False	NA	23	True	GATAAA	-18	NA	76555873	76579120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76560513_76562147_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.17	chr15	+	2716	11	NIC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	44.9898877526939	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555881	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577794_76577925_76578067_76578231_76578497
ES.12159.18	chr15	+	3459	10	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	36	-1	intron_retention	FALSE	canonical	3	82	junction_1	15.547617021966	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555882	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.19	chr15	+	2712	10	NNC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	44	2	intron_retention	FALSE	canonical	1	2	junction_1	38.7808021743227	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555890	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555981_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577925_76578067_76578231_76578497
ES.12159.2	chr15	+	2936	12	NNC	ENSMUSG00000033819.17	novel	2382	9	NA	NA	-2476	2	intron_retention	TRUE	non_canonical	0	0	junction_1	47.4935402306078	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76553338	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76553564_76573527_76573697_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.20	chr15	+	3152	9	NNC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	44	2	intron_retention	FALSE	canonical	0	0	junction_8	50.1971114706813	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555890	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76573527_76573695_76574371_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577794_76577925_76578067_76578260_76578497
ES.12159.21	chr15	+	2633	11	NNC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	37.1752605908822	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555891	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555981_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.22	chr15	+	2864	11	NIC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	49	2	intron_retention	FALSE	canonical	3	37	junction_1	34.0894411805181	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555895	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.23	chr15	+	2660	13	NNC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	42.0809405260333	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555896	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76573527_76573695_76574371_76575193_76575308_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.24	chr15	+	4317	5	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	50	0	intron_retention	FALSE	canonical	3	82	junction_1	21.9431082574917	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555896	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575968_76576054_76577925_76578067_76578231_76578497
ES.12159.26	chr15	+	2849	13	NNC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8582977827948	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555906	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76562064_76562147_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.27	chr15	+	3299	8	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	65	-1	intron_retention	FALSE	canonical	3	82	junction_1	18.6197174401498	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555911	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575968_76576054_76576201_76577036_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.28	chr15	+	2658	10	NNC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	83	-1	intron_retention	FALSE	canonical	0	0	junction_8	39.4013849477714	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555929	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577715_76577794_76577925_76578071_76578231_76578497
ES.12159.29	chr15	+	2903	10	NIC	ENSMUSG00000033819.17	novel	2827	12	NA	NA	84	-1	intron_retention	FALSE	canonical	3	37	junction_1	35.8887168898527	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555930	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.3	chr15	+	2693	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	-2	1	-2	-1	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555812	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.30	chr15	+	179	1	Intergenic	novelGene_10166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATATATTATTTAGC	NA	False	NA	NA	False	NA	NA	NA	76570327	76570506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76570300_76570500
ES.12159.31	chr15	+	5676	18	Fusion	ENSMUSG00000033819.17_ENSMUSG00000022546.6	novel	1792	11	NA	NA	298	0	intron_retention	FALSE	canonical	1	2	junction_9	55.9527729676391	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGACTCACCTGACTG	NA	False	NA	28	True	AATAAA	-44	NA	76575026	76583874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497_76581220_76581358_76581449_76581521_76581631_76581741_76581876_76582039_76582284_76582502_76582583_76582655_76582793_76582914_76583352_76583435_76583549_76583619
ES.12159.32	chr15	+	2181	5	NIC	ENSMUSG00000033819.17	novel	1981	8	NA	NA	108	-1	intron_retention	FALSE	canonical	1	2	junction_2	54.8515040814744	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76575998	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76577141_76577213_76577339_76577794_76577925_76578067_76578231_76578497
ES.12159.33	chr15	+	1779	11	FSM	ENSMUSG00000022546.6	ENSMUST00000023203.6	1792	11	-1	14	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	6.6783231428256	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTTGACTCACCTGAC	4510	False	NA	26	True	AATAAA	-42	NA	76580931	76583872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76581220_76581358_76581449_76581521_76581631_76581741_76581876_76582039_76582284_76582502_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ES.12159.34	chr15	+	2240	3	ISM	ENSMUSG00000022546.6	ENSMUST00000230283.2	1957	9	424	1	394	0	intron_retention	FALSE	canonical	2	4	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGACTCACCTGACTG	4938	False	NA	28	True	AATAAA	-44	NA	76581359	76583874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76581631_76581741_76581876_76582039
ES.12159.35	chr15	+	1102	5	NIC	ENSMUSG00000022546.6	novel	982	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	10	junction_3	3.39116499156263	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGACTCACCTGACTG	5968	False	NA	28	True	AATAAA	-44	NA	76582389	76583874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ES.12159.36	chr15	+	952	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	28	2	28	-2	multi-exon	FALSE	canonical	3	10	junction_4	4.40908153700972	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGGTGGCTGCCTGG	6017	False	NA	0	True	AATAAA	-16	NA	76582438	76583846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ES.12159.4	chr15	+	2554	11	NNC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	-16	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	47.5298853354392	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCCATGTGTCTCA	NA	False	NA	20	True	GATAAA	-15	NA	76555830	76579117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76555981_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578133_76578537
ES.12159.5	chr15	+	2845	9	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	-7	4	intron_retention	FALSE	canonical	3	82	junction_1	17.9578499548248	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTGTCTCACTGGTT	NA	False	NA	26	True	GATAAA	-21	NA	76555839	76579123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.6	chr15	+	3584	9	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	82	junction_1	16.293691263799	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555844	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575353_76575896_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.7	chr15	+	2819	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	7	1	7	-1	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCCCATGTGTCTCAC	NA	False	NA	21	True	GATAAA	-16	NA	76555853	76579118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.8	chr15	+	4264	6	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	23	0	intron_retention	FALSE	canonical	3	82	junction_1	19.7281524730523	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555869	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76575968_76576054_76577715_76577794_76577925_76578067_76578231_76578497
ES.12159.9	chr15	+	3268	9	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	23	0	intron_retention	FALSE	canonical	3	82	junction_1	17.2046505340853	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555869	76579119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76555963_76574371_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ES.1216.1	chr1	-	3498	6	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	4.01995024844836	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCAGGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	120235830	120220218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120223201_120223780_120223908_120224004_120224116_120228248_120228305_120228404_120228602_120235805
ES.1216.3	chr1	-	5813	8	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	3.97953950776689	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGATCTGCATTTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	120235830	120220222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120221086_120221255_120221360_120222916_120223201_120223780_120223903_120224004_120226632_120226844_120228305_120228404_120228722_120235794
ES.12160.1	chr15	+	1585	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	-5	666	-5	83	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCAGTTTGGATCTTC	9238	False	NA	15	True	CATAAA	-18	NA	76585659	76587773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ES.12160.2	chr15	+	1569	5	NIC	ENSMUSG00000019080.9	novel	2246	5	NA	NA	-3	83	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	22.7870577302117	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCAGTTTGGATCTTC	9240	False	NA	15	True	CATAAA	-18	NA	76585661	76587773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587476
ES.12160.3	chr15	+	1860	3	NIC	ENSMUSG00000019080.9	novel	2246	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	60	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCTGGGACACAGGAAA	9242	False	NA	3	True	AATAAA	-16	NA	76585663	76587689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76586992_76587078_76587384_76587462
ES.12160.4	chr15	+	2016	2	FSM	ENSMUSG00000019080.9	ENSMUST00000229018.2	477	2	-967	-572	2	79	multi-exon	FALSE	canonical	3	60	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTCTGCAGTTTGGAT	9245	False	NA	11	True	CATAAA	-14	NA	76585666	76587769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76586992_76587078
ES.12160.5	chr15	+	1944	3	NIC	ENSMUSG00000019080.9	novel	2246	5	NA	NA	8	83	intron_retention	FALSE	canonical	3	51	junction_2	4.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCAGTTTGGATCTTC	9251	False	NA	15	True	CATAAA	-18	NA	76585672	76587773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76586992_76587078_76587204_76587273
ES.12160.6	chr15	+	1645	4	ISM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	14	666	14	83	intron_retention	FALSE	canonical	3	46	junction_1	5.79271573232759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCAGTTTGGATCTTC	9257	False	NA	15	True	CATAAA	-18	NA	76585678	76587773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273
ES.12161.1	chr15	+	219	1	Intergenic	novelGene_10167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGACCATTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	76592078	76592297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76592100_76592300
ES.12162.1	chr15	+	2913	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	-35	-46	-15	0	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCCCCCTAGTCTAT	NA	False	NA	NA	False	NA	NA	NA	76594807	76599330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
ES.12162.10	chr15	+	2209	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.5933543066676	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATGGGCTTTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	76594843	76599236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76595037_76595163_76595284_76597066_76597421_76597600_76598186_76598279
ES.12162.11	chr15	+	2504	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	44.2634160453077	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTTTATCATGACC	NA	False	NA	NA	False	NA	NA	NA	76594844	76599296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76595284_76595621_76595731_76597066_76597421_76597600_76598186_76598279
ES.12162.12	chr15	+	1662	4	NNC	ENSMUSG00000033728.15	novel	4849	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	50.1752484354144	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATTTCTAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	76594846	76599284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595128_76597066_76597421_76598163_76598186_76598279
ES.12162.13	chr15	+	1753	4	FSM	ENSMUSG00000033728.15	ENSMUST00000142610.8	1782	4	7	22	1	-5	multi-exon	FALSE	canonical	1	2	junction_2	50.1752484354144	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATTTATGGGCTTT	NA	False	NA	NA	False	NA	NA	NA	76594849	76599230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76595128_76597066_76597421_76598015_76598186_76598279
ES.12162.14	chr15	+	5017	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-23	-1051	1	0	multi-exon	FALSE	canonical	3	39	junction_1	41.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTTATTCTGGAATCA	NA	False	NA	NA	False	AATAAA	-17	NA	76594849	76601899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76595128_76597066_76598186_76598279
ES.12162.15	chr15	+	2445	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-22	1520	2	-2	multi-exon	FALSE	canonical	3	39	junction_1	41.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTGCCCCCTAGTCT	NA	False	NA	NA	False	NA	NA	NA	76594850	76599328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76595128_76597066_76598186_76598279
ES.12162.16	chr15	+	2710	5	NNC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.5890962007529	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTCCTAATTGGAT	NA	False	NA	NA	False	NA	NA	NA	76594850	76599253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595473_76595555_76595731_76597066_76597421_76597600_76598186_76598279
ES.12162.17	chr15	+	2186	5	NNC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	49.6405831956072	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATTTCTAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	76594862	76599284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76594985_76595163_76595284_76597066_76597421_76597600_76598186_76598279
ES.12162.18	chr15	+	2353	4	NNC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.5678778348646	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCATTTCTAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	76594877	76599283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595284_76597066_76597421_76597600_76598190_76598279
ES.12162.2	chr15	+	2954	4	NNC	ENSMUSG00000033728.15	novel	1782	4	NA	NA	-5	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.0457905740837	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGGCTATCCCACTATT	NA	False	NA	NA	False	AATATA	-17	NA	76594817	76599350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76596177_76597066_76597421_76598015_76598186_76598279
ES.12162.3	chr15	+	2414	6	NNC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.6467521596328	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGTGTTGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	76594820	76599289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76594985_76595555_76595731_76596050_76596177_76597066_76597421_76597600_76598186_76598279
ES.12162.4	chr15	+	2915	5	NNC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.509101137566	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGAATTTATGGGCT	NA	False	NA	NA	False	NA	NA	NA	76594829	76599228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595731_76596050_76596177_76597066_76597421_76597600_76598186_76598279
ES.12162.5	chr15	+	2208	5	NIC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	43.9395892106424	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATGGGCTTTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	76594833	76599236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76595037_76595621_76595731_76597066_76597421_76597600_76598186_76598279
ES.12162.6	chr15	+	2494	4	NIC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	50.7805737134454	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATTTCTAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	76594841	76599284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76595037_76595555_76595731_76597066_76598186_76598279
ES.12162.7	chr15	+	2296	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	4	2549	-1	20	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGGCTATCCCACTATT	NA	False	NA	NA	False	AATATA	-17	NA	76594841	76599350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
ES.12162.8	chr15	+	2443	5	NNC	ENSMUSG00000033728.15	novel	2832	4	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.1008056065592	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATACTGCCCCCTAGT	NA	False	NA	NA	False	NA	NA	NA	76594841	76599326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595128_76595555_76595731_76597066_76597421_76597604_76598186_76598279
ES.12162.9	chr15	+	2477	6	NNC	ENSMUSG00000033728.15	novel	2286	6	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.6727850035315	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATTTATGGGCTTT	NA	False	NA	NA	False	NA	NA	NA	76594841	76599230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76595128_76595555_76595731_76596050_76596177_76597066_76597421_76597600_76598186_76598279
ES.12163.1	chr15	+	179	1	Intergenic	novelGene_10168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATATTTAACTA	2555	False	NA	NA	False	NA	NA	NA	76628774	76628953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76628800_76629000
ES.12164.1	chr15	+	2837	1	Antisense	novelGene_ENSMUSG00000033697.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAATTAAAAAAAA	6695	False	NA	NA	False	NA	NA	NA	76678417	76681254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76678400_76681300
ES.12165.1	chr15	+	4260	1	Intergenic	novelGene_10169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76683158	76687418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76683200_76687400
ES.12166.1	chr15	+	6126	1	Intergenic	novelGene_10171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCAGTTAACCAGGAGCA	145	False	NA	NA	False	TTTAAA	-36	NA	76690742	76696868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76690700_76696900
ES.12166.2	chr15	+	2712	1	Intergenic	novelGene_10170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGGAATAGAAGCAGGCC	145	False	NA	NA	False	AAGAAA	-1	NA	76690742	76693454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76690700_76693500
ES.12167.1	chr15	+	177	1	Intergenic	novelGene_10173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAGCGAGCTGGGTTG	4329	False	NA	NA	False	NA	NA	NA	76705879	76706056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76705900_76706100
ES.12168.1	chr15	+	194	2	Antisense	novelGene_ENSMUSG00000022526.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	76739679	76760313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76739750_76760189
ES.12169.1	chr15	-	3940	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-15	-267	combination_of_known_junctions	TRUE	canonical	3	230	junction_1	231.34534070663	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	76541135	76527861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ES.12169.10	chr15	-	1835	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-15	1160	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	231.34534070663	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTTGTTGGAGGG	NA	False	NA	-1	True	ATTAAA	-20	NA	76541135	76529966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ES.12169.11	chr15	-	3629	1	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	1432	1159	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTTGTTGGAGG	5154	False	NA	-2	True	ATTAAA	-19	NA	76533596	76529967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530000_76533600
ES.12169.12	chr15	-	1778	4	NNC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-11	1159	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	319.877407072703	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTTGTTGGAGG	NA	False	NA	-2	True	ATTAAA	-19	NA	76541131	76529967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76530775_76532298_76532511_76533140_76533328_76540559
ES.12169.13	chr15	-	9011	3	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	3129	2373	-12	1159	3prime_fragment	FALSE	canonical	3	230	junction_1	269.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTTGTTGGAGG	NA	False	NA	-2	True	ATTAAA	-19	NA	76541132	76529967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76530775_76532298_76532511_76533140
ES.12169.14	chr15	-	2697	5	NNC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-1	1159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	314.149944294122	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTTGTTGGAGG	NA	False	NA	-2	True	ATTAAA	-19	NA	76541121	76529967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76530775_76532298_76532511_76533140_76533380_76533503_76534381_76540559
ES.12169.15	chr15	-	3415	2	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	9351	2377	118	1155	intron_retention	FALSE	canonical	3	230	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACTTTCTGTTTTGTTG	3840	False	NA	-6	True	ATTAAA	-15	NA	76534910	76529971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76530775_76532298
ES.12169.16	chr15	-	1615	5	NNC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-12	1153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	311.222187512394	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTACTTTCTGTTTTGT	NA	False	NA	-8	True	ATTAAA	-13	NA	76541132	76529973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559_76540745_76540954
ES.12169.17	chr15	-	9012	3	ISM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	-255	-64	-51	0	intron_retention	FALSE	canonical	3	120	junction_1	324.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	NA	False	NA	-1	True	AATAAA	-24	NA	76541171	76531126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76531896_76532298_76532511_76533140
ES.12169.18	chr15	-	1890	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	-37	1	-37	-1	multi-exon	FALSE	canonical	3	306	junction_1	196.445638508186	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGTGTGTCTGCT	NA	False	NA	-2	True	AATAAA	-23	NA	76541157	76531127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
ES.12169.19	chr15	-	1802	4	FSM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	-226	-63	-22	-1	multi-exon	FALSE	canonical	3	120	junction_1	282.269768523344	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGTGTGTCTGCT	NA	False	NA	-2	True	AATAAA	-23	NA	76541142	76531127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76531896_76532298_76532511_76533140_76533380_76540559
ES.12169.2	chr15	-	11114	3	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	3131	268	-10	-268	3prime_fragment	FALSE	canonical	3	230	junction_1	269.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTGTCTGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	76541130	76527862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76530775_76532298_76532511_76533140
ES.12169.20	chr15	-	9044	3	FSM	ENSMUSG00000053929.18	ENSMUST00000229552.2	2933	3	-6103	-8	-11	-1	multi-exon	FALSE	canonical	3	306	junction_1	231.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCTGTGTGTCTGCT	NA	False	NA	-2	True	AATAAA	-23	NA	76541131	76531127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76531969_76532298_76532511_76533140
ES.12169.21	chr15	-	2424	3	NIC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	4	2	intron_retention	FALSE	canonical	3	18	junction_2	144	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATCCTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-17	NA	76541116	76531133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76531969_76532298_76533331_76540559
ES.12169.23	chr15	-	1735	4	NNC	ENSMUSG00000053929.18	novel	1513	4	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	335.760165726801	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATCCTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-17	NA	76541133	76531133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76531896_76532298_76532511_76533140_76533328_76540559
ES.12169.24	chr15	-	4391	1	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-496	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATCCTGTCTGTGTG	3226	False	NA	-8	True	AATAAA	-17	NA	76535524	76531133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76531100_76535500
ES.12169.25	chr15	-	1781	5	NNC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	301.674079098619	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATCCTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-17	NA	76541116	76531133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559_76540773_76540834
ES.12169.26	chr15	-	1807	4	NIC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	309.356680153436	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATCCTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-17	NA	76541129	76531133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76531969_76532298_76532511_76533140_76533331_76540559
ES.12169.27	chr15	-	1932	2	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	10564	3541	1331	0	internal_fragment	FALSE	canonical	3	769	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTATCCTGTCTGTG	5053	False	NA	-10	True	AATAAA	-15	NA	76533697	76531135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76532511_76533140
ES.12169.29	chr15	-	754	3	NNC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTGTATCCTGTCTG	NA	False	NA	-12	True	AATAAA	-13	NA	76541139	76531137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76531260_76533327_76533380_76540559
ES.12169.3	chr15	-	3870	4	NNC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	2	-268	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	319.877407072703	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTGTCTGTGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	76541118	76527862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76530775_76532298_76532511_76533140_76533328_76540559
ES.12169.30	chr15	-	1127	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	-14	-3	-14	2	multi-exon	FALSE	canonical	3	19	junction_2	30	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGAATTTGTTTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	76544331	76542336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76543066_76543418_76543640_76544154
ES.12169.31	chr15	-	1580	1	FSM	ENSMUSG00000053929.18	ENSMUST00000230719.2	1601	1	17	4	17	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGAATTTGTTTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	76543916	76542336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76542300_76543900
ES.12169.32	chr15	-	1017	3	NNC	ENSMUSG00000053929.18	novel	1168	3	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	35	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGGAATTTGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	76543918	76542337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76543066_76543418_76543495_76543705
ES.12169.34	chr15	-	1042	3	Fusion	ENSMUSG00000053929.18_ENSMUSG00000033837.6	novel	1110	3	NA	NA	99	-4	multi-exon	FALSE	canonical	1	1	junction_2	39	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGAGTATGGAATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	76553903	76542343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_76543066_76543418_76543640_76553804
ES.12169.35	chr15	-	1078	3	NNC	ENSMUSG00000053929.18	novel	1168	3	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATATACAGGAGTATGG	NA	False	NA	NA	False	AATAAA	-5	NA	76543930	76542349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76543066_76543418_76543706_76543855
ES.12169.36	chr15	-	3925	4	NNC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	67	4921	intron_retention	TRUE	non_canonical	0	0	junction_1	143.306974320474	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76553935	76547503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76547724_76549740_76549859_76550077_76553534_76553804
ES.12169.37	chr15	-	5931	3	NNC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	69	4766	intron_retention	FALSE	non_canonical	0	0	junction_1	152	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	76554079	76547658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76549859_76550077_76553534_76553804
ES.12169.38	chr15	-	6414	1	Genic_Genomic	ENSMUSG00000033837.6	novel	NA	NA	NA	NA	-70	4766	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	76554072	76547658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_76547700_76554100
ES.12169.39	chr15	-	6175	2	NIC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	44	4766	intron_retention	FALSE	canonical	3	304	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	76554104	76547658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76553534_76553804
ES.12169.4	chr15	-	3860	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-51	-383	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	231.34534070663	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGTTTTTATGGTT	NA	False	NA	-4	True	AATAAA	-20	NA	76541171	76527977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ES.12169.40	chr15	-	166	1	Intergenic	novelGene_10162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76550073	76549907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76549900_76550100
ES.12169.41	chr15	-	1717	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	42	-394	42	394	multi-exon	FALSE	canonical	3	304	junction_2	19.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76554106	76552030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76553341_76553428_76553534_76553804
ES.12169.42	chr15	-	1776	2	NIC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	71	394	intron_retention	FALSE	canonical	3	304	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76554077	76552030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76553534_76553804
ES.12169.43	chr15	-	1679	3	FSM	ENSMUSG00000033837.6	ENSMUST00000230207.2	507	3	-78	-1094	68	394	multi-exon	FALSE	canonical	3	24	junction_2	159.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76554080	76552030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76553341_76553428_76553522_76553804
ES.12169.44	chr15	-	1584	2	NIC	ENSMUSG00000033837.6	novel	1365	3	NA	NA	70	394	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76554078	76552030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76553341_76553804
ES.12169.5	chr15	-	3906	5	NNC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-9	-383	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	356.698314405886	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGTTTTTATGGTT	NA	False	NA	-4	True	AATAAA	-20	NA	76541129	76527977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76530775_76530887_76530976_76532298_76532511_76533140_76533380_76540559
ES.12169.7	chr15	-	3710	4	ISM	ENSMUSG00000053929.18	ENSMUST00000081291.13	3959	5	379	385	51	-385	3prime_fragment	FALSE	canonical	0	0	junction_3	322.280416200964	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCAAGTGTTTTTATGG	NA	False	NA	-6	True	AATAAA	-18	NA	76543882	76527979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76530775_76532298_76532511_76533140_76533380_76543418
ES.12169.8	chr15	-	3753	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	2	-388	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	316.133937859678	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGCAAGTGTTTTTA	NA	False	NA	-9	True	AATAAA	-15	NA	76541118	76527982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530775_76532298_76532511_76533140_76533331_76540559
ES.12169.9	chr15	-	2144	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	-11	1473	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	231.34534070663	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCAACTCTA	NA	False	NA	NA	False	NA	NA	NA	76541131	76529653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ES.1217.1	chr1	+	1965	2	FSM	ENSMUSG00000036907.12	ENSMUST00000037286.12	1999	2	33	1	33	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCGGCTCCTGCTCTTT	6924	False	NA	NA	False	ATTAAA	-13	NA	120268344	120270902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_120269531_120270123
ES.12170.1	chr15	-	342	1	Intergenic	novelGene_10163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76557897	76557555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76557600_76557900
ES.12170.2	chr15	-	160	1	Intergenic	novelGene_10164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAGAGAGAGCGCGC	NA	False	NA	NA	False	NA	NA	NA	76557897	76557737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76557700_76557900
ES.12171.1	chr15	-	2126	3	Antisense	novelGene_ENSMUSG00000090429.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	76746180	76559834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76559965_76744003_76745845_76746025
ES.12171.10	chr15	-	4067	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-33	-1	intron_retention	FALSE	canonical	2	2	junction_18	23.3375234333037	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594781	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594300_76594399_76594477_76594512_76594592
ES.12171.11	chr15	-	3917	22	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_16	23.9694628098397	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594747	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592653_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594602
ES.12171.12	chr15	-	4031	21	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-47	-1	intron_retention	FALSE	canonical	3	37	junction_11	16.6661333247997	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594795	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.13	chr15	-	3973	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	7	junction_9	20.2136092769203	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594784	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.14	chr15	-	3932	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_3	25.6329377949544	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594738	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588664_76588851_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.15	chr15	-	4284	19	NNC	ENSMUSG00000033762.9	novel	3984	20	NA	NA	0	-2	intron_retention	FALSE	canonical	3	7	junction_8	19.7527932077003	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594748	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588857_76588933_76589104_76589186_76589317_76589390_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594399_76594477_76594512_76594592
ES.12171.16	chr15	-	5005	13	NIC	ENSMUSG00000033762.9	novel	3984	20	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	47	junction_12	16.5854270035139	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594776	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76589104_76589186_76590057_76590145_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594399_76594477_76594512_76594592
ES.12171.17	chr15	-	4049	21	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	37	junction_11	16.4605589212517	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594738	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.18	chr15	-	3902	22	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_4	20.7355665179628	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTTCTGGTAACAT	NA	False	NA	-7	True	AATAAA	-17	NA	76594747	76587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588851_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.19	chr15	-	4118	20	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	7	junction_9	20.3895579163002	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTTCTGGTAACA	NA	False	NA	-8	True	AATAAA	-16	NA	76594738	76587755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594399_76594477_76594512_76594592
ES.12171.2	chr15	-	176	1	Intergenic	novelGene_10165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTAACT	NA	False	NA	NA	False	NA	NA	NA	76560952	76560776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76560800_76561000
ES.12171.20	chr15	-	2534	16	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	1549	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3287801085636	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTTCTGGTAACA	NA	False	NA	-8	True	AATAAA	-16	NA	76592861	76587755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588257_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734
ES.12171.21	chr15	-	3895	22	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	18	-3	intron_retention	FALSE	canonical	2	2	junction_19	20.1987853522239	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTTCTGGTAACA	NA	False	NA	-8	True	AATAAA	-16	NA	76594715	76587755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594300_76594399_76594477_76594512_76594592
ES.12171.22	chr15	-	5194	16	NNC	ENSMUSG00000033762.9	novel	3984	20	NA	NA	-23	2	intron_retention	TRUE	non_canonical	0	0	junction_9	25.3741776002472	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCTTTCTGGTAA	NA	False	NA	-10	True	AATAAA	-14	NA	76594690	76587757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588857_76588933_76589104_76589186_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76592071_76592301_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594399_76594477_76594512_76594592
ES.12171.23	chr15	-	4061	20	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	1	2	intron_retention	FALSE	canonical	3	37	junction_10	16.036316126313	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCTTTCTGGTAA	NA	False	NA	-10	True	AATAAA	-14	NA	76594747	76587757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.24	chr15	-	3990	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-5	2	intron_retention	FALSE	canonical	2	2	junction_18	20.6533290294809	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCTTTCTGGTAA	NA	False	NA	-10	True	AATAAA	-14	NA	76594738	76587757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594300_76594399_76594477_76594512_76594592
ES.12171.25	chr15	-	3970	22	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	28	1	intron_retention	FALSE	canonical	0	0	junction_19	20.4651132828041	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGCTTTCTGGTA	NA	False	NA	-11	True	AATAAA	-13	NA	76594705	76587758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594212_76594399_76594477_76594512_76594592
ES.12171.27	chr15	-	4100	20	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	17	0	intron_retention	FALSE	canonical	3	37	junction_10	16.6698427260036	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	76594716	76587759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76590057_76590145_76590288_76590358_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.28	chr15	-	4136	19	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_3	21.1325183859694	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	76594738	76587759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588796_76588933_76589104_76589186_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.29	chr15	-	2358	10	NIC	ENSMUSG00000033762.9	novel	3592	22	NA	NA	3399	0	intron_retention	FALSE	canonical	3	46	junction_6	18.0739222823013	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	76591011	76587759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590806_76590882
ES.12171.3	chr15	-	3945	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	-49	0	-34	0	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	-5	True	AATAAA	-19	NA	76594782	76587752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.30	chr15	-	4230	19	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-4	0	intron_retention	FALSE	canonical	2	2	junction_16	21.437606854645	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	76594752	76587759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76590057_76590145_76590288_76590358_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594300_76594399_76594477_76594512_76594592
ES.12171.31	chr15	-	4047	18	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-101	0	intron_retention	FALSE	canonical	3	37	junction_9	17.1833185382265	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	76594511	76587759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76590057_76590145_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477
ES.12171.32	chr15	-	3487	23	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	20.2639605993881	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTATGTGCTTTCTGG	NA	False	NA	-13	True	AATAAA	-11	NA	76594721	76587760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593152_76593540_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.33	chr15	-	3510	22	NNC	ENSMUSG00000033762.9	novel	3592	22	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_17	23.2856655954306	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTATGTGCTTTCTGG	NA	False	NA	-13	True	AATAAA	-11	NA	76594712	76587760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593152_76593536_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.34	chr15	-	3919	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	17	-1	intron_retention	FALSE	canonical	2	2	junction_18	23.4305356319483	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTATGTGCTTTCTGG	NA	False	NA	-13	True	AATAAA	-11	NA	76594716	76587760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594129_76594300_76594399_76594477_76594512_76594592
ES.12171.36	chr15	-	4001	20	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	7	junction_8	20.7258854302972	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTATGTGCTTTCTGG	NA	False	NA	-13	True	AATAAA	-11	NA	76594747	76587760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.37	chr15	-	3088	1	Genic_Genomic	ENSMUSG00000033707.10	novel	NA	NA	NA	NA	3076	3023	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAAGAAAAGAGAAG	8040	False	NA	NA	False	NA	NA	NA	76599540	76596452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_76596500_76599500
ES.12171.38	chr15	-	2812	3	NNC	ENSMUSG00000033707.10	novel	1904	6	NA	NA	3078	3022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAGGAAAGAAAAGAGAA	8042	False	NA	NA	False	NA	NA	NA	76599538	76596453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76597418_76597597_76598181_76598273
ES.12171.39	chr15	-	1785	4	ISM	ENSMUSG00000033707.10	ENSMUST00000049956.5	1904	6	3210	6	-547	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGAGTGTGTTGGGGC	9805	False	NA	NA	False	AGTAAA	-17	NA	76603163	76599481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76600507_76602122_76602292_76602421_76602701_76602851
ES.12171.40	chr15	-	1923	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	1	-170	1	170	multi-exon	FALSE	canonical	3	37	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTTGGTCCTATCTTCC	9310	False	NA	NA	False	ATTAAA	-44	NA	76608039	76605494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76607184_76607370_76607420_76607854
ES.12171.41	chr15	-	1760	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	-2	-4	-2	4	multi-exon	FALSE	canonical	3	37	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGACTTTAAATGATCAT	9307	False	NA	0	True	ATTAAA	-27	NA	76608042	76605660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76607184_76607370_76607420_76607854
ES.12171.43	chr15	-	1683	2	NIC	ENSMUSG00000116138.2	novel	1754	3	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCTATTGACTTTAAA	9328	False	NA	-7	True	ATTAAA	-20	NA	76608021	76605667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76607184_76607854
ES.12171.44	chr15	-	4666	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	-76	-3	-76	3	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTTCTTTCAGGTT	8093	False	NA	-1	True	AATAAA	-20	NA	76702446	76608181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.45	chr15	-	4581	12	NIC	ENSMUSG00000033697.17	novel	4500	12	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	20.6893592645316	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTTTCTTTCAGGT	8370	False	NA	-2	True	AATAAA	-19	NA	76702169	76608182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76701998
ES.12171.46	chr15	-	4805	13	NNC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	24.0420638326524	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTTTCTTTCAGGT	8188	False	NA	-2	True	AATAAA	-19	NA	76702351	76608182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76678794_76679030_76702191
ES.12171.47	chr15	-	4523	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	-27	-2	-27	2	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTTTCTTTCAGGT	8142	False	NA	-2	True	AATAAA	-19	NA	76702397	76608182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.48	chr15	-	4610	13	NNC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.9196334794266	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8214	False	NA	-4	True	AATAAA	-17	NA	76702325	76608184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609377_76609522_76609693_76610122_76610172_76610254_76610366_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.49	chr15	-	5952	4	NNC	ENSMUSG00000033697.17	novel	4494	11	NA	NA	-5988	0	intron_retention	FALSE	canonical	0	0	junction_2	33.008416435139	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	1558	False	NA	-4	True	AATAAA	-17	NA	76615791	76608184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609693_76610122_76610178_76610828_76611029_76611602
ES.12171.5	chr15	-	4256	19	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	37	junction_9	14.8968676797059	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594783	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589317_76589390_76590057_76590145_76590288_76590358_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.50	chr15	-	5026	11	NIC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	-9	0	intron_retention	FALSE	canonical	3	33	junction_4	15.509996776273	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8160	False	NA	-4	True	AATAAA	-17	NA	76702379	76608184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76609377_76609522_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.51	chr15	-	2783	6	NIC	ENSMUSG00000033697.17	novel	4494	11	NA	NA	-11199	0	intron_retention	FALSE	canonical	3	26	junction_4	16.5239220525879	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	5046	False	NA	-4	True	AATAAA	-17	NA	76621002	76608184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655
ES.12171.52	chr15	-	4605	12	NNC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.8953782914246	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8193	False	NA	-4	True	AATAAA	-17	NA	76702346	76608184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609377_76609522_76609735_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.53	chr15	-	4782	3	NIC	ENSMUSG00000033697.17	novel	4494	11	NA	NA	-3884	-1	intron_retention	FALSE	canonical	3	70	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGATTGTGTTTCTTTCA	3662	False	NA	-5	True	AATAAA	-16	NA	76613687	76608185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76609377_76609522_76611029_76611602
ES.12171.54	chr15	-	4730	11	NIC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	33	junction_4	15.4534785728004	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTGTTTCTTTC	8170	False	NA	-6	True	AATAAA	-15	NA	76702369	76608186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.56	chr15	-	4836	12	NNC	ENSMUSG00000033697.17	novel	4500	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_11	24.2572303270694	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTGTTTCTTTC	8367	False	NA	-6	True	AATAAA	-15	NA	76702172	76608186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76650139_76650313_76702061
ES.12171.57	chr15	-	4740	14	NNC	ENSMUSG00000033697.17	novel	4587	12	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.4477774650845	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCGCTGATTGTGTTTC	8174	False	NA	-10	True	AATAAA	-11	NA	76702365	76608190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76645441_76645528_76645704_76645783_76649684_76649852_76702191
ES.12171.58	chr15	-	4482	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	-7	112	-7	-112	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCGGAGGTCCTGGCCT	8162	False	NA	-116	True	ATTAAA	-14	NA	76702377	76608296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.59	chr15	-	4365	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	17	112	-12	-112	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCGGAGGTCCTGGCCT	8186	False	NA	-116	True	ATTAAA	-14	NA	76702353	76608296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.6	chr15	-	4251	19	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	21	-1	intron_retention	FALSE	canonical	3	7	junction_8	19.6435048794918	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594712	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.60	chr15	-	6678	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-39	-2494	2	2494	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGACTTCCAAAGAGTG	8171	False	NA	NA	False	AATAAA	-22	NA	76702368	76615162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.61	chr15	-	7723	5	NIC	ENSMUSG00000033697.17	novel	4145	6	NA	NA	-34	2486	intron_retention	FALSE	canonical	3	59	junction_3	12.5573683548744	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCGTGACTGACTTCC	8135	False	NA	NA	False	AATAAA	-14	NA	76702404	76615170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.62	chr15	-	5889	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-48	-1696	-7	1696	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATACCTACAGAAGTAT	8162	False	NA	NA	False	NA	NA	NA	76702377	76615960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.63	chr15	-	4899	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-48	-706	-7	706	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGCTTCCTGGTCTAT	8162	False	NA	NA	False	NA	NA	NA	76702377	76616950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.64	chr15	-	4715	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-5	-565	-5	565	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTACAGGGTTTTTGTTGT	8205	False	NA	NA	False	NA	NA	NA	76702334	76617091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.65	chr15	-	4598	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	-1	-452	-1	452	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATCCCCTGCCTCTGCC	8209	False	NA	NA	False	NA	NA	NA	76702330	76617204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ES.12171.66	chr15	-	595	3	FSM	ENSMUSG00000033697.17	ENSMUST00000176219.9	542	3	-62	9	2	-5	multi-exon	FALSE	canonical	3	22	junction_1	34	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAAAGTTCAGCCCAT	8171	False	NA	NA	False	NA	NA	NA	76702368	76642249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76642501_76649684_76649852_76702191
ES.12171.67	chr15	-	8390	3	Genic_Genomic	ENSMUSG00000033697.17	novel	4500	12	NA	NA	-6	-44047	multi-exon	TRUE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCTGCGTGTTGTTTT	8192	False	NA	NA	False	AGTAAA	-5	NA	76702347	76693784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_76697326_76697400_76697492_76697589
ES.12171.68	chr15	-	130	2	Intergenic	novelGene_10172	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACGAAAACATGAACA	NA	False	NA	NA	False	NA	NA	NA	76762768	76703346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76703355_76762646
ES.12171.69	chr15	-	176	1	Intergenic	novelGene_10174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	823	False	NA	NA	False	NA	NA	NA	76723010	76722834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76722800_76723000
ES.12171.7	chr15	-	4101	20	NIC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	18	-1	intron_retention	FALSE	canonical	3	37	junction_10	16.7692503181474	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594715	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.70	chr15	-	4328	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	30	-322	3	322	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGTTTGTGTGGAAG	NA	False	NA	NA	False	AATAAA	-25	NA	76755605	76735486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
ES.12171.71	chr15	-	4122	5	NNC	ENSMUSG00000022526.9	novel	4036	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.01338006955277	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	76755615	76735808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76738815_76750441_76750548_76754006_76754121_76754481_76754615_76754852
ES.12171.73	chr15	-	4050	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	-14	0	-14	0	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	76755649	76735808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
ES.12171.74	chr15	-	4075	4	NNC	ENSMUSG00000022526.9	novel	4036	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.17856276425687	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	76755606	76735808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76738815_76753938_76754121_76754481_76754615_76754852
ES.12171.75	chr15	-	3873	3	FSM	ENSMUSG00000022526.9	ENSMUST00000230315.2	3337	3	3	-539	3	0	multi-exon	FALSE	canonical	0	0	junction_2	10	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	76755605	76735808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76738815_76754006_76754121_76754852
ES.12171.77	chr15	-	4358	4	NNC	ENSMUSG00000022526.9	novel	4036	4	NA	NA	2	-2	intron_retention	FALSE	canonical	2	3	junction_1	8.01387685344754	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAGTCTGTAGTGATG	NA	False	NA	NA	False	ATTAAA	-15	NA	76755615	76735810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76738815_76750441_76750548_76754006_76754121_76754481
ES.12171.78	chr15	-	1264	3	FSM	ENSMUSG00000022526.9	ENSMUST00000230315.2	3337	3	-38	2111	-11	-1249	multi-exon	FALSE	canonical	0	0	junction_2	10	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATTCAGACCTAAG	NA	False	NA	NA	False	AATAAA	-7	NA	76755646	76738458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76738815_76754006_76754121_76754852
ES.12171.79	chr15	-	759	5	NNC	ENSMUSG00000022526.9	novel	4036	4	NA	NA	6	-1276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.22724133595217	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGACATATGCAATAA	NA	False	NA	NA	False	AATAAA	-19	NA	76755602	76738485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852_76754955_76755521
ES.12171.8	chr15	-	3813	22	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	-65	-1	intron_retention	FALSE	canonical	0	0	junction_7	20.5923614836648	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594813	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589955_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ES.12171.80	chr15	-	2413	2	NNC	ENSMUSG00000022526.9	novel	579	2	NA	NA	-12	5815	intron_retention	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAGGACTTTA	NA	False	NA	NA	False	NA	NA	NA	76755647	76748553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76748765_76753445
ES.12171.9	chr15	-	3788	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	22	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	20.8731286586367	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTTTCTGGTAACATA	NA	False	NA	-6	True	AATAAA	-18	NA	76594711	76587753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594122_76594477_76594512_76594592
ES.12172.1	chr15	+	4423	4	ISM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	8	0	8	0	intron_retention	FALSE	canonical	3	69	junction_1	14.8174071805952	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763466	76776595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430
ES.12172.10	chr15	+	3299	6	NNC	ENSMUSG00000033669.9	novel	2960	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	43.4667689160352	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTAGCCTGTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76763521	76776592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76773408_76773758_76774206
ES.12172.11	chr15	+	2662	4	NIC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.5854581808798	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTAGCCTGTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76763521	76776592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76763554_76765311_76765439_76772430_76772548_76774206
ES.12172.13	chr15	+	1485	5	NNC	ENSMUSG00000116024.2	novel	1384	5	NA	NA	27	17	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	40.5154291597658	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATGTTATTCTATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	76763546	76785500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76763798_76764938_76764983_76765311_76765439_76772433_76772548_76784551
ES.12172.14	chr15	+	2675	4	ISM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	1427	-1	1401	1	3prime_fragment	FALSE	canonical	3	76	junction_3	12.3558353285671	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTGTAGCCTGTACT	NA	False	NA	NA	False	AATAAA	-14	NA	76764935	76776590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76764983_76765311_76765439_76772430_76772548_76774206
ES.12172.16	chr15	+	320	1	Intergenic	novelGene_10176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	76781041	76781361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76781000_76781400
ES.12172.17	chr15	+	4068	1	FSM	ENSMUSG00000055041.9	ENSMUST00000230815.2	1331	1	-2727	-10	-2672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	76781437	76785505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76781400_76785500
ES.12172.18	chr15	+	1030	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	2	5	2	-5	multi-exon	TRUE	canonical	3	114	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATGTTATTCTATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	76784111	76785500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76784193_76784551
ES.12172.19	chr15	+	1061	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	-16	-125	10	11	multi-exon	FALSE	canonical	3	59	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGGGAATTAAACCTACC	NA	False	NA	NA	False	ATTAAA	-34	NA	76784119	76785516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76784216_76784551
ES.12172.2	chr15	+	2008	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	11	-744	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	34.1055347414463	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTACCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	76763469	76775845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772433_76772548_76774206
ES.12172.20	chr15	+	1341	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	21	-325	-5	325	multi-exon	FALSE	canonical	3	114	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATGAGAACAGGGCCG	NA	False	NA	33	True	ATTAAA	-44	NA	76784130	76785830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76784193_76784551
ES.12172.21	chr15	+	1995	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	57	-1015	2	1015	multi-exon	FALSE	canonical	3	114	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGATGGTGGGGGTGC	NA	False	NA	NA	False	NA	NA	NA	76784166	76786520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76784193_76784551
ES.12172.3	chr15	+	3005	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	-39	-6	11	0	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763469	76776595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ES.12172.4	chr15	+	2755	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	17	0	17	0	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763475	76776595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ES.12172.5	chr15	+	4666	4	ISM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	-28	-19	22	13	intron_retention	FALSE	canonical	3	16	junction_1	37.8505834389203	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAACTCAAAGTGAATC	NA	False	NA	NA	False	AATAAA	-32	NA	76763480	76776608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430
ES.12172.6	chr15	+	5752	3	FSM	ENSMUSG00000033669.9	ENSMUST00000229729.2	2340	3	-2	-3410	-2	3	multi-exon	FALSE	canonical	3	83	junction_2	11	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTAGCCTGTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76763519	76776592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76764983_76765311_76765439_76772430
ES.12172.7	chr15	+	2773	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	-2	12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	38.4341970125564	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGAACTCAAAGTGAAT	NA	False	NA	NA	False	AATAAA	-31	NA	76763519	76776607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772598_76774206
ES.12172.8	chr15	+	2844	6	NNC	ENSMUSG00000116024.2	novel	659	6	NA	NA	2	2200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.8112134843197	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTAGCCTGTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	76763521	76776592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76773408_76773547_76774206
ES.12173.1	chr15	-	135	1	Intergenic	novelGene_10175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	76778232	76778097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76778100_76778200
ES.12174.1	chr15	+	1702	5	NIC	ENSMUSG00000003970.10	novel	851	6	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	5295	junction_1	2594.21038082882	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788243	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76790172_76790320
ES.12174.10	chr15	+	865	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4563.73956312145	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCGGCGTGTGTGAGCC	NA	False	NA	31	True	AATAAA	-15	NA	76788284	76790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76788993_76789237_76790055_76790172_76790320
ES.12174.12	chr15	+	828	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4466.90096599421	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788284	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76788310_76788502_76788651_76788752_76788881_76789017_76789237_76790055_76790172_76790320
ES.12174.13	chr15	+	829	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4542.52452277365	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCGGCGTGTGTGAGCC	NA	False	NA	31	True	AATAAA	-15	NA	76788285	76790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789254_76790083_76790172_76790320
ES.12174.14	chr15	+	1033	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	-15	2	9	-2	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788286	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ES.12174.16	chr15	+	1917	3	NIC	ENSMUSG00000003970.10	novel	851	6	NA	NA	8	-2	intron_retention	FALSE	canonical	3	10804	junction_1	346.5	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788309	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76788881_76789017_76790172_76790320
ES.12174.17	chr15	+	1153	4	ISM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	8	8	8	-8	intron_retention	FALSE	canonical	3	10804	junction_2	277.709680541869	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTAATCCGGCGTGTGT	NA	False	NA	26	True	AATAAA	-10	NA	76788309	76790506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055
ES.12174.18	chr15	+	1908	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	198	-1086	-3	1086	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACAAGTTATTCTGTG	NA	False	NA	0	True	NA	NA	NA	76788499	76791600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ES.12174.2	chr15	+	892	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	-34	-7	-34	7	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCCTCTTTTGTGA	NA	False	NA	41	True	AATAAA	-25	NA	76788243	76790521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ES.12174.3	chr15	+	828	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4542.52452277365	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTAATCCGGCGTGTGT	NA	False	NA	26	True	AATAAA	-10	NA	76788248	76790506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790099_76790172_76790320
ES.12174.5	chr15	+	848	6	NNC	ENSMUSG00000003970.10	novel	851	6	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4542.52452277365	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCGGCGTGTGTGAGCC	NA	False	NA	31	True	AATAAA	-15	NA	76788283	76790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790049_76790172_76790320
ES.12174.6	chr15	+	1123	4	NIC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	7	-2	intron_retention	FALSE	canonical	3	10804	junction_1	296.542670716299	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788284	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76788881_76789017_76789237_76790055_76790172_76790320
ES.12174.7	chr15	+	2228	1	NIC	ENSMUSG00000003970.10	novel	851	6	NA	NA	7	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	False	NA	32	True	AATAAA	-16	NA	76788284	76790512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76788300_76790500
ES.12174.8	chr15	+	2028	2	ISM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	7	9	7	-9	intron_retention	FALSE	canonical	3	5295	junction_1	0	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTAATCCGGCGTGTG	NA	False	NA	25	True	AATAAA	-9	NA	76788284	76790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76788310_76788502
ES.12175.1	chr15	+	260	1	Intergenic	novelGene_10178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCTCAGAGAGCTGT	NA	False	NA	NA	False	NA	NA	NA	76792571	76792831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76792600_76792800
ES.12175.2	chr15	+	159	1	Intergenic	novelGene_10177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	76792571	76792730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76792600_76792700
ES.12176.1	chr15	-	176	1	Intergenic	novelGene_10179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAATACCCAACG	NA	False	NA	NA	False	NA	NA	NA	76793608	76793432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76793400_76793600
ES.12177.1	chr15	+	173	1	Intergenic	novelGene_10180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGTAGCCTA	NA	False	NA	NA	False	NA	NA	NA	76802631	76802804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76802600_76802800
ES.12178.1	chr15	+	179	1	Intergenic	novelGene_10181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	76804332	76804511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76804300_76804500
ES.12178.2	chr15	+	395	1	Intergenic	novelGene_10182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACACAAAAAATTAGGG	NA	False	NA	NA	False	NA	NA	NA	76804334	76804729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76804300_76804700
ES.12178.3	chr15	+	3466	1	Antisense	novelGene_ENSMUSG00000054967.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATAGGGAAGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	76804538	76808004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76804500_76808000
ES.12179.1	chr15	-	2589	7	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.2469507659596	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCTCTGAGTTTGT	8490	False	NA	NA	False	ATTAAA	-24	NA	76809643	76794570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76809507
ES.12179.2	chr15	-	2395	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	-183	0	-183	0	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCTCTGAGTTTGT	8302	False	NA	NA	False	ATTAAA	-24	NA	76809831	76794570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
ES.12179.3	chr15	-	2614	8	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.2379844955251	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCTCTGAGTTTGT	8509	False	NA	NA	False	ATTAAA	-24	NA	76809624	76794570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805452_76807427_76807540_76809575
ES.12179.4	chr15	-	2854	8	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.3746158030659	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGGCTCTGAGTTTG	8531	False	NA	NA	False	ATTAAA	-23	NA	76809602	76794571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805715_76807427_76807540_76809575
ES.12179.5	chr15	-	2731	8	NNC	ENSMUSG00000054967.8	novel	644	6	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.3746158030659	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGATGGCTCTGAGTTT	8533	False	NA	NA	False	ATTAAA	-22	NA	76809600	76794572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805048_76805227_76805315_76805595_76807427_76807540_76809575
ES.12179.6	chr15	-	2251	5	ISM	ENSMUSG00000054967.8	ENSMUST00000229865.2	644	6	4172	-1604	-3230	-13	3prime_fragment	FALSE	canonical	0	0	junction_4	10.158124826955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGGGCCAGAGAGATG	NA	False	NA	NA	False	ATTAAA	-11	NA	76805440	76794583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76805315
ES.12179.7	chr15	-	2371	5	NNC	ENSMUSG00000054967.8	novel	2212	5	NA	NA	7	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	9.75961064797157	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGGGCCAGAGAGATG	8549	False	NA	NA	False	ATTAAA	-11	NA	76809584	76794583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809339
ES.1218.1	chr1	-	268	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATTTGGGTTGCTGGCT	NA	False	NA	NA	False	AATGAA	-19	NA	120288784	120288516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_120288500_120288800
ES.12180.1	chr15	-	160	1	FSM	ENSMUSG00000115920.2	ENSMUST00000230695.2	1356	1	56	1140	56	-1140	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	76819204	76819044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76819000_76819200
ES.12181.1	chr15	+	179	1	Intergenic	novelGene_10183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATAGGTA	8372	False	NA	NA	False	NA	NA	NA	76826659	76826838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76826700_76826800
ES.12181.10	chr15	+	1116	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	-5	0	-5	0	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832716	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ES.12181.11	chr15	+	930	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.762410619274	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832721	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76832745_76832828_76833120_76833267_76833353_76833840_76833891_76834448
ES.12181.12	chr15	+	1414	4	NIC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	-3	0	intron_retention	FALSE	canonical	1	74	junction_2	91.5435536901546	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832725	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76832745_76832828_76833120_76833267_76833891_76834448
ES.12181.14	chr15	+	1417	4	NNC	ENSMUSG00000063236.7	novel	1131	4	NA	NA	6	77	intron_retention	FALSE	canonical	0	0	junction_2	122.11833969101	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGTCTCCAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	76832734	76835256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76833120_76833267_76833353_76833751_76833891_76834448
ES.12181.15	chr15	+	3391	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	13	-2293	6	2043	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGCTAACAATGAATTC	NA	False	NA	NA	False	ATTAAA	-27	NA	76832734	76837222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ES.12181.16	chr15	+	933	1	NIC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	1044	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAATAGGATGGTGTGA	NA	False	NA	17	True	AATAAA	-9	NA	76833992	76834925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76834000_76834900
ES.12181.17	chr15	+	172	1	Intergenic	novelGene_10187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGTCTCAA	4976	False	NA	NA	False	NA	NA	NA	76910849	76911021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76910800_76911000
ES.12181.2	chr15	+	177	2	Antisense	novelGene_ENSMUSG00000018893.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTGGAGAGATGGC	8373	False	NA	NA	False	NA	NA	NA	76826660	76926353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76826806_76926321
ES.12181.3	chr15	+	174	2	Antisense	novelGene_ENSMUSG00000018893.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTGGAGAGATGGC	8375	False	NA	NA	False	NA	NA	NA	76826662	76926353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_76826816_76926332
ES.12181.4	chr15	+	1261	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	-218	0	-218	0	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832487	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ES.12181.6	chr15	+	982	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.762410619274	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832700	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76832745_76832828_76833120_76833267_76833384_76833840_76833891_76834448
ES.12181.7	chr15	+	1080	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	104.907101761511	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832706	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76832745_76832828_76833120_76833267_76833391_76833743_76833891_76834448
ES.12181.8	chr15	+	1515	3	NIC	ENSMUSG00000063236.7	novel	1111	4	NA	NA	-6	4	intron_retention	FALSE	canonical	1	74	junction_1	107	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGTGAGAGAGAGAGTT	NA	False	NA	28	True	AATAAA	-20	NA	76832715	76834936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_76833120_76833267_76833891_76834448
ES.12181.9	chr15	+	1063	5	NNC	ENSMUSG00000063236.7	novel	1043	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	104.624029266703	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832716	76834929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_76832745_76832828_76833120_76833267_76833384_76833743_76833891_76834448
ES.12182.1	chr15	-	159	1	Intergenic	novelGene_10184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	76827886	76827727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76827700_76827900
ES.12183.1	chr15	-	1802	1	Antisense	novelGene_ENSMUSG00000063236.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	76836170	76834368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_76834400_76836200
ES.12184.1	chr15	-	3591	1	Intergenic	novelGene_10185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	76852819	76849228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76849200_76852800
ES.12185.1	chr15	-	181	1	Intergenic	novelGene_10186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	76873957	76873776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_76873800_76874000
ES.12186.1	chr15	+	1787	2	ISM	ENSMUSG00000033576.13	ENSMUST00000149569.9	2314	5	5599	-1	-1876	1	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGACTACAGGGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	76935074	76941307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_76935606_76940051
ES.12187.1	chr15	+	2706	1	Intergenic	novelGene_10188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAACAAGTTGATATGC	6674	False	NA	NA	False	NA	NA	NA	76956844	76959550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_76956800_76959600
ES.12188.1	chr15	+	175	1	Intergenic	novelGene_10189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACAAAGCTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	77065460	77065635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77065500_77065600
ES.12189.1	chr15	+	188	1	Intergenic	novelGene_10190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATATTTAAGC	NA	False	NA	NA	False	NA	NA	NA	77116849	77117037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77116800_77117000
ES.1219.1	chr1	+	138	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTAAAAAAAATAAA	62	False	NA	NA	False	NA	NA	NA	120495527	120495665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_120495500_120495700
ES.12190.1	chr15	+	1725	1	Intergenic	novelGene_10191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGGTTGGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	77140173	77141898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77140200_77141900
ES.12191.1	chr15	+	1197	1	Intergenic	novelGene_10192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77145782	77146979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77145800_77147000
ES.12191.2	chr15	+	177	2	Antisense	novelGene_ENSMUSG00000033565.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAATGGAGA	NA	False	NA	NA	False	NA	NA	NA	77146804	77236681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77146944_77236643
ES.12191.3	chr15	+	7977	1	Intergenic	novelGene_10193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACTCCCTCGCGCTGCC	NA	False	NA	NA	False	NA	NA	NA	77182443	77190420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77182400_77190400
ES.12191.4	chr15	+	595	4	Intergenic	novelGene_10194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAACAGAGAGGCCCGC	NA	False	NA	NA	False	NA	NA	NA	77197400	77203093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77197494_77198016_77198250_77202192_77202292_77202923
ES.12191.5	chr15	+	265	1	Intergenic	novelGene_10196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGCACTTGGGTGGC	NA	False	NA	NA	False	NA	NA	NA	77212703	77212968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77212700_77213000
ES.12191.6	chr15	+	206	1	Intergenic	novelGene_10197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGGTAGCTGAAC	NA	False	NA	NA	False	NA	NA	NA	77219325	77219531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77219300_77219500
ES.12191.7	chr15	+	170	1	Intergenic	novelGene_10198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAAGCAAATAT	NA	False	NA	NA	False	NA	NA	NA	77225176	77225346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77225200_77225300
ES.12191.8	chr15	+	2862	2	Intergenic	novelGene_10199	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAATTAAAAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	77230699	77233794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77230948_77231180
ES.12192.1	chr15	-	6912	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCGTTTTGGCTCCTTC	NA	False	NA	-5	True	AATAAA	-17	NA	77191194	76963187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.10	chr15	-	8235	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	43	0	intron_retention	FALSE	non_canonical	0	0	junction_4	55.889523963699	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77191085	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.14	chr15	-	6532	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190804	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.15	chr15	-	5799	9	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-14553	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.0446310004393	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	76988453	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76988426
ES.12192.16	chr15	-	5404	15	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.0462782391707	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190802	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76967072_76967349_76967508_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.17	chr15	-	5636	13	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.6332188348948	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77037973	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76967508_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.18	chr15	-	6534	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-180	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	50.3412659311976	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77087816	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
ES.12192.2	chr15	-	6974	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	-67	0	9	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77191195	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.20	chr15	-	6855	13	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.1884047835567	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77191101	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978720_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997856_77001120_77001268_77016916_77017142_77190563
ES.12192.21	chr15	-	6511	12	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	75.0035811817185	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190823	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.22	chr15	-	6639	15	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.4514643289828	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77190800	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76981030_76981094_76982139_76982283_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.23	chr15	-	4182	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.1769833039266	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77190793	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76966021_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
ES.12192.24	chr15	-	5807	9	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	-14828	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.0932187333414	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	76988728	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76988680
ES.12192.25	chr15	-	6364	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	56.5771351538961	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77190823	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77115586_77115638_77190563
ES.12192.26	chr15	-	7004	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.2427340088312	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77191233	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001261_77016916_77017142_77115586_77115638_77190563
ES.12192.27	chr15	-	3908	12	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	18975	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.5625733521237	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	76998005	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76966021_76966293_76966472_76969777_76969851_76970266_76970356_76978650_76978691_76981030_76981094_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804
ES.12192.28	chr15	-	6522	14	NIC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	73.3133826187683	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77037930	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76976011_76976055_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.29	chr15	-	6320	13	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	9551	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	55.1922775395254	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77078085	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77078043
ES.12192.3	chr15	-	7062	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77191295	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.31	chr15	-	4658	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.1083725160105	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77190827	76963190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76966472_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.32	chr15	-	3759	12	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.4888638187846	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTGGCGTTTTGGCTC	5631	False	NA	-9	True	AATAAA	-13	NA	77017009	76963191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76966021_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916
ES.12192.33	chr15	-	6602	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-174	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.9271309744916	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTGGCGTTTTGGCTC	NA	False	NA	-9	True	AATAAA	-13	NA	77087810	76963191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76981030_76981094_76982139_76982286_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
ES.12192.34	chr15	-	5944	15	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.652937991335	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTGGCGTTTTGGCTC	NA	False	NA	-9	True	AATAAA	-13	NA	77190841	76963191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76964250_76964911_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.35	chr15	-	6425	13	NNC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	930	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.1922775395254	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTGGCGTTTTGGCT	NA	False	NA	-10	True	AATAAA	-12	NA	77086706	76963192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77086557
ES.12192.36	chr15	-	6608	15	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	64.0710702331117	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCCTGGCGTTTTGGCT	NA	False	NA	-10	True	AATAAA	-12	NA	77190801	76963192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76976011_76976055_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.39	chr15	-	4569	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-4	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.0026511493187	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGAGAGAAACACC	NA	False	NA	-28	True	AATGAA	-12	NA	77191208	76963210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76966017_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987133_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.40	chr15	-	4957	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	62	-3325	62	4	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCCGGAAGCCTC	NA	False	NA	NA	False	CATAAA	-19	NA	77037892	76964674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.41	chr15	-	5323	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	36	4	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCCGGAAGCCTC	NA	False	NA	NA	False	CATAAA	-19	NA	77191092	76964674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.42	chr15	-	5373	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	37	4	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCCGGAAGCCTC	NA	False	NA	NA	False	CATAAA	-19	NA	77191091	76964674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.43	chr15	-	4983	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	328	1596	5	-107	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAAACGTGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	77190800	76964785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.44	chr15	-	3646	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-74	1151	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77191278	76966537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.45	chr15	-	3697	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-74	1151	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77191278	76966537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.46	chr15	-	3147	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-141	1151	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	50.3412659311976	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77087777	76966537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
ES.12192.47	chr15	-	3007	16	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-9	1150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.8255779423181	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCATCCTTTTGTAAG	NA	False	NA	-1	True	ATTAAA	-20	NA	77190814	76966538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76967072_76967186_76967240_76967349_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.48	chr15	-	3107	12	NIC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	-130	1150	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	77.9142355360916	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCATCCTTTTGTAAG	NA	False	NA	-1	True	ATTAAA	-20	NA	77087766	76966538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
ES.12192.49	chr15	-	3199	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	-44	-1461	-12	1150	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCATCCTTTTGTAAG	NA	False	NA	-1	True	ATTAAA	-20	NA	77037998	76966538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.50	chr15	-	3188	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	7	1150	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	67.1310906609846	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCATCCTTTTGTAAG	NA	False	NA	-1	True	ATTAAA	-20	NA	77190798	76966538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.51	chr15	-	3121	12	NIC	ENSMUSG00000033565.19	novel	1810	13	NA	NA	-6	1150	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.5292502980776	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCATCCTTTTGTAAG	NA	False	NA	-1	True	ATTAAA	-20	NA	77037960	76966538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.52	chr15	-	3707	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	-150	3350	-74	1149	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGCATCCTTTTGTAA	NA	False	NA	-2	True	ATTAAA	-19	NA	77191278	76966539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.53	chr15	-	3421	13	NNC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	27	1145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.1922775395254	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCAAGCATCCTTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	77191101	76966543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017100_77190563
ES.12192.54	chr15	-	3171	12	NIC	ENSMUSG00000033565.19	novel	1720	13	NA	NA	-47	1145	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	70.5565830022874	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCAAGCATCCTTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	77190852	76966543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77190563
ES.12192.55	chr15	-	3195	13	NNC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	-12096	1144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.1922775395254	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCATCAAGCATCCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	77099732	76966544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77099461
ES.12192.59	chr15	-	3203	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	15	3355	-11	1143	multi-exon	FALSE	non_canonical	0	0	junction_5	66.7536931978715	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAAGCATCCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	77037997	76966545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.6	chr15	-	6526	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	9553	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.2037295159184	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77078083	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77076858_77077054_77078043
ES.12192.60	chr15	-	3256	14	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	5	1141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.7429474132096	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTGCATCAAGCATCC	NA	False	NA	-10	True	ATTAAA	-11	NA	77190800	76966547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190525
ES.12192.61	chr15	-	3630	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-74	1123	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAAAGTGGCTGACCTT	NA	False	NA	-28	True	GATAAA	-15	NA	77191278	76966565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.62	chr15	-	2502	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-18	411	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGTGTTCAATCGATAT	NA	False	NA	NA	False	ATTAAA	-20	NA	77190823	76967277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.63	chr15	-	1848	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	265	4794	-58	12	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCCACACTTAGCTTA	NA	False	NA	NA	False	AAAAAG	-20	NA	77190863	76967983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.64	chr15	-	2247	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-90	-2	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGCATTTCCACGTCT	NA	False	NA	NA	False	TTTAAA	-23	NA	77191294	76968003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.65	chr15	-	1725	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	35	4813	9	-2	multi-exon	FALSE	non_canonical	0	0	junction_5	66.7536931978715	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGCATTTCCACGTCT	NA	False	NA	NA	False	TTTAAA	-23	NA	77037977	76968003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.66	chr15	-	2182	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-77	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77191281	76968016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.67	chr15	-	1990	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	27	-3	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77191101	76968016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.68	chr15	-	1721	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	-44	17	-12	-3	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77037998	76968016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.7	chr15	-	6663	15	NNC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.1307793630931	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77190830	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561_77087616_77115586_77115638_77190563
ES.12192.70	chr15	-	1676	13	NNC	ENSMUSG00000033565.19	novel	6573	13	NA	NA	-139	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.2501032630351	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77087775	76968016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982283_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77087561
ES.12192.72	chr15	-	1890	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	27	4990	27	-72	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGTTCCAAAGAT	NA	False	NA	NA	False	TTTAAA	-12	NA	77191101	76968179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ES.12192.73	chr15	-	1513	13	NIC	ENSMUSG00000033565.19	novel	1694	13	NA	NA	4	-86	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGCCTTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	77190801	76968193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.74	chr15	-	1931	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	-4	-87	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	63.47369315096	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTCTGCCTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	77191208	76968194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
ES.12192.75	chr15	-	3827	3	FSM	ENSMUSG00000033565.19_ENSMUSG00000116298.2	ENSMUST00000226877.2	417	3	-134	-3276	-134	57	multi-exon	FALSE	canonical	3	20	junction_2	63.5	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTCTCTGCAGCAGT	NA	False	NA	NA	False	AATAAA	-8	NA	77087770	76997874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77001268_77016916_77017142_77087561
ES.12192.8	chr15	-	6545	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	-41	-4810	-9	0	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77037995	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12192.9	chr15	-	6561	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	13	-1	-13	0	multi-exon	FALSE	non_canonical	0	0	junction_5	66.7536931978715	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77037999	76963189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ES.12193.1	chr15	-	173	1	Intergenic	novelGene_10195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAATCCAGA	5921	False	NA	NA	False	NA	NA	NA	77197848	77197675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77197700_77197800
ES.12194.1	chr15	-	178	1	Intergenic	novelGene_10200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACGA	NA	False	NA	NA	False	NA	NA	NA	77231170	77230992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77231000_77231200
ES.12195.1	chr15	+	2127	2	Intergenic	novelGene_10201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAAATGACATGACTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	77240661	77244659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77240860_77242730
ES.12195.2	chr15	+	1964	2	Intergenic	novelGene_10203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACATGACTCTGAAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	77240665	77244664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77240860_77242894
ES.12195.3	chr15	+	507	2	Intergenic	novelGene_10202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTATTTGCTTCCTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	77240665	77241387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77240860_77241074
ES.12195.4	chr15	+	1678	3	Intergenic	novelGene_10204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACATGACTCTGAAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	77240682	77244664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77240860_77242730_77242878_77243310
ES.12196.1	chr15	-	203	1	Intergenic	novelGene_10205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATGTAAAGA	3592	False	NA	NA	False	NA	NA	NA	77254078	77253875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77253900_77254100
ES.12197.1	chr15	-	159	1	Intergenic	novelGene_10206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	547	False	NA	NA	False	NA	NA	NA	77257123	77256964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77257000_77257100
ES.12198.1	chr15	+	179	1	Intergenic	novelGene_10207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGATGTTTTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	77604177	77604356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77604200_77604400
ES.12199.1	chr15	+	185	1	Intergenic	novelGene_10208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77717119	77717304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77717100_77717300
ES.12199.2	chr15	+	163	2	Antisense	novelGene_ENSMUSG00000084497.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	77717121	77802443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77717252_77802410
ES.12199.3	chr15	+	277	1	Intergenic	novelGene_10209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGCCGAATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	77728068	77728345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77728100_77728300
ES.12199.4	chr15	+	215	1	Intergenic	novelGene_10212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAGAATGAAAA	4473	False	NA	NA	False	NA	NA	NA	77738105	77738320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77738100_77738300
ES.12199.5	chr15	+	5776	1	Intergenic	novelGene_10213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1360	False	NA	NA	False	NA	NA	NA	77742120	77747896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77742100_77747900
ES.12199.6	chr15	+	4291	2	Intergenic	novelGene_10214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTTCCTGGCATTGAG	2241	False	NA	NA	False	AATAAA	-11	NA	77743001	77748395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77746712_77747814
ES.12199.7	chr15	+	174	1	Intergenic	novelGene_10216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77769970	77770144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77770000_77770100
ES.12199.8	chr15	+	183	1	Intergenic	novelGene_10218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	77793992	77794175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77794000_77794200
ES.12199.9	chr15	+	4116	1	Antisense	novelGene_ENSMUSG00000005354.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGGAAGAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	77800421	77804537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77800400_77804500
ES.122.1	chr1	+	178	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	13515536	13515714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13515500_13515700
ES.1220.1	chr1	+	1388	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	1233	3	1233	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTGACTGCCCTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	120531379	120535718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_120531651_120534601
ES.12200.1	chr15	-	7658	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	-221	-4	-221	4	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGGGTGTTTGGCT	NA	False	NA	2	True	AATAAA	-21	NA	77726596	77644782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.12	chr15	-	7560	42	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	121.032524967219	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	77726297	77644787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77721616_77721823_77726156
ES.12200.17	chr15	-	6506	32	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-9594	-2	intron_retention	FALSE	canonical	0	0	junction_7	110.401857952364	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	False	NA	-4	True	AATAAA	-15	NA	77674927	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651328_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903
ES.12200.18	chr15	-	7324	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-3490	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	103.211042892706	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	False	NA	-4	True	AATAAA	-15	NA	77700921	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77700809
ES.12200.23	chr15	-	4362	20	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	127.854097940233	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	False	NA	-4	True	AATAAA	-15	NA	77726270	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658213_77697354_77697432_77726156
ES.12200.25	chr15	-	1947	6	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-5364	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	228.801573421163	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	503	False	NA	-4	True	AATAAA	-15	NA	77659343	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648021_77658756_77658895_77659273
ES.12200.28	chr15	-	3195	24	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.1724432814598	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	False	NA	-4	True	AATAAA	-15	NA	77726310	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77644913_77658834_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.29	chr15	-	7266	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	102.903203910277	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	False	NA	-4	True	AATAAA	-15	NA	77726348	77644788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653436_77653724_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.3	chr15	-	7355	42	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	136.043716947459	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTGGGTGTTTGG	NA	False	NA	0	True	AATAAA	-19	NA	77726292	77644784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667706_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77698088_77698096_77726162
ES.12200.30	chr15	-	7297	40	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	123.53520447857	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77726313	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664198_77664284_77665485_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.31	chr15	-	6714	38	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-15895	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	106.721677438814	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77681228	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680148_77680255_77681200
ES.12200.32	chr15	-	3620	5	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	1412	-3	intron_retention	TRUE	canonical	0	0	junction_4	254.007258754548	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	9868	False	NA	-5	True	AATAAA	-14	NA	77649978	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77649824_77649899
ES.12200.33	chr15	-	7369	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_40	102.6993062294	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77726297	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726139
ES.12200.34	chr15	-	7678	42	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-185	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	121.22938567043	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77726560	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667107_77667171_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.37	chr15	-	1813	7	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	2598	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.804885626209	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77648792	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77645350_77645666_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704
ES.12200.38	chr15	-	2056	16	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.154579179041	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGGTGTCTGGGTG	NA	False	NA	-5	True	AATAAA	-14	NA	77726306	77644789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77644905_77667659_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.42	chr15	-	7479	42	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	121.115742991883	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCTTTGGTGTCTGGGT	NA	False	NA	-6	True	AATAAA	-13	NA	77726362	77644790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77716826_77716890_77726156
ES.12200.44	chr15	-	7392	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	103.48255891695	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCTTTGGTGTCTGGGT	NA	False	NA	-6	True	AATAAA	-13	NA	77726339	77644790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655463_77656017_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.45	chr15	-	6951	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	70	412	0	-412	multi-exon	FALSE	canonical	3	307	junction_27	78.3427565254121	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCTCTAGTTCTGGG	NA	False	NA	NA	False	AAAAAG	-23	NA	77726305	77645198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.46	chr15	-	6459	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	-1	975	-1	-975	multi-exon	FALSE	canonical	3	307	junction_27	78.3427565254121	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTAGTGTTACCCTCC	NA	False	NA	2	True	GATAAA	-19	NA	77726376	77645761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.48	chr15	-	7092	38	NIC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	13	-979	intron_retention	FALSE	canonical	3	307	junction_24	73.4390720073266	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTCTAGTAGTGTTACC	NA	False	NA	-2	True	GATAAA	-15	NA	77726362	77645765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77646217_77647151_77647531_77647991_77648624_77648704_77648794_77649899_77650029_77650913_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.5	chr15	-	7388	40	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	103.92905206557	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTGTCTGGGTGTTT	NA	False	NA	-2	True	AATAAA	-17	NA	77726332	77644786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079_77697432_77726156
ES.12200.50	chr15	-	6442	40	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	13	-980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.250483698475	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTCTAGTAGTGTTAC	NA	False	NA	-3	True	GATAAA	-14	NA	77726362	77645766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647417_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079_77697432_77726156
ES.12200.51	chr15	-	6357	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	23	-981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	103.368019715964	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCCTCTAGTAGTGTTA	NA	False	NA	-4	True	GATAAA	-13	NA	77726282	77645767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676541_77680156_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.52	chr15	-	6372	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	4	-981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	103.473801031952	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCCTCTAGTAGTGTTA	NA	False	NA	-4	True	GATAAA	-13	NA	77726301	77645767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674909_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.53	chr15	-	6374	41	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	2	-981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.681524496801	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCCTCTAGTAGTGTTA	NA	False	NA	-4	True	GATAAA	-13	NA	77726303	77645767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648710_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12200.54	chr15	-	1020	2	NNC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	8	-34839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACATTGTAGCCATTTC	NA	False	NA	NA	False	NA	NA	NA	77726297	77724584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77725464_77726156
ES.12200.9	chr15	-	8162	39	NIC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	30	-1	intron_retention	FALSE	canonical	3	307	junction_25	72.2202166660476	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	77726345	77644787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77646217_77647151_77647325_77647421_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ES.12201.1	chr15	-	205	1	Intergenic	novelGene_10210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGGTTAAACG	NA	False	NA	NA	False	NA	NA	NA	77730314	77730109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77730100_77730300
ES.12202.1	chr15	-	2700	2	Intergenic	novelGene_10211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTATTCCCTATAGTC	NA	False	NA	NA	False	AAAAAG	-4	NA	77739736	77736552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77738081_77738564
ES.12203.1	chr15	-	177	1	Intergenic	novelGene_10215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAT	8573	False	77755273	NA	False	NA	NA	NA	77755264	77755087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77755100_77755300
ES.12204.1	chr15	-	191	1	Intergenic	novelGene_10217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAATCGCTAACCCTAC	1183	False	NA	NA	False	NA	NA	NA	77776595	77776404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_77776400_77776600
ES.12205.1	chr15	-	1410	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	-111	-1	-111	1	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGTTCTGTGGGCA	2604	False	NA	-4	True	AATAAA	-20	NA	77813317	77799245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ES.12205.10	chr15	-	3836	1	NIC	ENSMUSG00000005354.17	novel	621	4	NA	NA	-3185	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGTTCTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	77803085	77799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77799200_77803100
ES.12205.11	chr15	-	822	5	NNC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	518.143983367558	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGCTGCTGTTCTGT	11	True	NA	-9	True	AATAAA	-15	NA	77813209	77799250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77799437_77799911_77800058_77808742_77808867_77811891_77812155_77813106
ES.12205.13	chr15	-	1119	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	24	155	-8	8	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGCTGTGAAGAACAGAG	2739	False	NA	1	True	AATAAA	-24	NA	77813182	77799401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ES.12205.15	chr15	-	3742	1	Genic_Genomic	ENSMUSG00000005354.17	novel	NA	NA	NA	NA	-5546	2029	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGGAATATTTATTTTAAA	7774	False	NA	NA	False	NA	NA	NA	77805446	77801704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_77801700_77805400
ES.12205.16	chr15	-	791	4	NIC	ENSMUSG00000005354.17	novel	481	3	NA	NA	-8	15	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	569.641602725394	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGTAAATTTGTCATT	2739	False	NA	NA	False	AATAAA	-29	NA	77813182	77803718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77804047_77808742_77808867_77811891_77812155_77813106
ES.12205.17	chr15	-	654	3	FSM	ENSMUSG00000005354.17	ENSMUST00000100486.6	676	3	15	7	-8	-7	multi-exon	FALSE	canonical	3	21	junction_1	642	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAAACGGGCTCA	2739	False	NA	NA	False	NA	NA	NA	77813182	77810604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77810920_77811891_77812155_77813106
ES.12205.5	chr15	-	1318	4	NNC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	1	-1	intron_retention	FALSE	canonical	2	7	junction_3	526.060410557148	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCTGTTCTGTGGG	2748	False	NA	-6	True	AATAAA	-18	NA	77813173	77799247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77800058_77808742_77808867_77811891_77812209_77813106
ES.12205.6	chr15	-	1002	3	NIC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	579.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCTGTTCTGTGGG	2747	False	NA	-6	True	AATAAA	-18	NA	77813174	77799247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77800058_77808742_77808867_77813106
ES.12205.8	chr15	-	1256	4	NNC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	570.107007499469	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCTGTTCTGTGGG	2749	False	NA	-6	True	AATAAA	-18	NA	77813172	77799247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77800058_77808749_77808867_77811891_77812155_77813106
ES.12205.9	chr15	-	1133	4	NNC	ENSMUSG00000005354.17	novel	1298	4	NA	NA	0	-3	intron_retention	FALSE	canonical	2	6	junction_3	526.530995183464	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGTTCTGTG	2747	False	NA	-8	True	AATAAA	-16	NA	77813174	77799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77800058_77808742_77808867_77811891_77812025_77813106
ES.12206.1	chr15	-	6042	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	14	-1263	14	1263	multi-exon	TRUE	canonical	3	38	junction_8	9.62337648645214	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8673	False	NA	NA	False	NA	NA	NA	77840908	77823458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.10	chr15	-	5056	10	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0004748294723	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTTCTGCTCTGGCA	8674	False	NA	-4	True	AATAAA	-17	NA	77840907	77824727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829778_77830077_77831217_77831460_77832103_77832261_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.11	chr15	-	5591	2	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	-1371	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTTCTGCTCTGGCA	9171	False	NA	-4	True	AATAAA	-17	NA	77831459	77824727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77830077_77831217
ES.12206.13	chr15	-	7067	8	NIC	ENSMUSG00000016552.14	novel	4347	9	NA	NA	3	-3	intron_retention	FALSE	canonical	3	12	junction_7	17.2413835327229	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAATTTCTGCTCTGGC	8662	False	NA	-5	True	AATAAA	-16	NA	77840919	77824728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
ES.12206.14	chr15	-	4042	9	FSM	ENSMUSG00000016552.14	ENSMUST00000117725.2	4347	9	-62	367	-15	-367	multi-exon	FALSE	canonical	3	12	junction_8	16.6203000875435	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTACTTGTTTGT	8644	False	NA	NA	False	NA	NA	NA	77840937	77825585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
ES.12206.15	chr15	-	3742	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	10	1041	10	-544	multi-exon	FALSE	canonical	3	38	junction_8	9.62337648645214	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACTAGAGATGTCTTC	8669	False	NA	NA	False	NA	NA	NA	77840912	77825762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.16	chr15	-	3826	10	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	-1	-546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.6429197503394	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGACTAGAGATGTCT	8658	False	NA	NA	False	NA	NA	NA	77840923	77825764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829778_77829950_77831217_77831460_77832103_77832179_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.2	chr15	-	4818	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	-25	0	-25	0	multi-exon	FALSE	canonical	3	38	junction_8	9.62337648645214	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTCTGGCATTTTGG	8634	False	NA	2	True	AATAAA	-23	NA	77840947	77824721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.4	chr15	-	4906	9	FSM	ENSMUSG00000016552.14	ENSMUST00000117725.2	4347	9	-62	-497	-15	0	multi-exon	FALSE	canonical	3	12	junction_8	16.6203000875435	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTCTGGCATTTTGG	8644	False	NA	2	True	AATAAA	-23	NA	77840937	77824721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
ES.12206.5	chr15	-	4375	8	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	1068	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.1312709566864	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCTCTGGCATTTT	9774	False	NA	0	True	AATAAA	-21	NA	77839807	77824723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829778_77829950_77831217_77831682_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788
ES.12206.6	chr15	-	4944	11	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7427659741528	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGCTCTGGCATTT	8706	False	NA	-1	True	AATAAA	-20	NA	77840875	77824724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829778_77829950_77831217_77831460_77832103_77832261_77832396_77832441_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.7	chr15	-	4901	9	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.2357202738128	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTCTGCTCTGGCATT	8674	False	NA	-2	True	AATAAA	-19	NA	77840907	77824725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829778_77830077_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12206.8	chr15	-	4909	10	NNC	ENSMUSG00000016552.14	novel	4793	9	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8317797177451	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTTCTGCTCTGGCAT	8653	False	NA	-3	True	AATAAA	-18	NA	77840928	77824726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77827593_77829199_77829315_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ES.12207.1	chr15	+	3227	6	NNC	ENSMUSG00000097057.2	novel	4343	2	NA	NA	1450	3809	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTCGCCCCTGAGGT	7050	False	NA	NA	False	NA	NA	NA	77847323	77855135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_77848353_77849102_77850411_77850881_77850968_77851502_77851640_77852375_77852792_77854884
ES.12208.1	chr15	-	3439	13	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	36	467	intron_retention	FALSE	canonical	3	1461	junction_8	114.998882844815	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAATGAAAATAAGTTC	2797	False	NA	NA	False	NA	NA	NA	77854961	77842730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77852422_77852656_77852790_77854882
ES.12208.10	chr15	-	1864	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	452.749790114782	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2766	False	NA	-14	True	AATAAA	-21	NA	77854992	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846056_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.12	chr15	-	1826	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	118	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	590.40816476435	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	3031	False	NA	-14	True	AATAAA	-21	NA	77854727	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852383_77852422_77852656_77852790_77854658
ES.12208.13	chr15	-	2384	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	3	1461	junction_8	115.803189499361	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2765	False	NA	-14	True	AATAAA	-21	NA	77854993	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.15	chr15	-	1848	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	452.197491621273	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2785	False	NA	-14	True	AATAAA	-21	NA	77854973	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852383_77852422_77852656_77852790_77854882
ES.12208.16	chr15	-	3408	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	5	-3	intron_retention	FALSE	canonical	3	1461	junction_8	111.163454468937	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2750	False	NA	-14	True	AATAAA	-21	NA	77855008	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.18	chr15	-	1696	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	-16	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	452.276018531577	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCCTGTGCTCCC	2729	False	NA	-14	True	AATAAA	-21	NA	77855029	77843200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847400_77848309_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.2	chr15	-	2952	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	5	467	intron_retention	FALSE	canonical	3	1461	junction_8	117.306406045912	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAATGAAAATAAGTTC	2766	False	NA	NA	False	NA	NA	NA	77854992	77842730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.20	chr15	-	1809	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	100	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	452.763538095297	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCGTCCTGTGCTCC	3013	False	NA	-15	True	AATAAA	-20	NA	77854745	77843201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854700
ES.12208.21	chr15	-	1868	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	5	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	447.556175929061	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCGTCCTGTGCTCC	2766	False	NA	-15	True	AATAAA	-20	NA	77854992	77843201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843317_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.24	chr15	-	2088	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	97	-5	intron_retention	FALSE	canonical	3	103	junction_13	439.365653544736	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTTCGTCCTGTGCTC	3010	False	NA	-16	True	AATAAA	-19	NA	77854748	77843202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852790_77854658
ES.12208.26	chr15	-	1867	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	452.831821058619	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTTCGTCCTGTGCTC	2765	False	NA	-16	True	AATAAA	-19	NA	77854993	77843202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846125_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.28	chr15	-	1833	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	31	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	452.615443611813	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTTCGTCCTGTGCTC	2792	False	NA	-16	True	AATAAA	-19	NA	77854966	77843202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846757_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.29	chr15	-	2281	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	0	-7	intron_retention	FALSE	canonical	3	1461	junction_8	111.578507399989	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTTCGTCCTGTGC	2745	False	NA	-18	True	AATAAA	-17	NA	77855013	77843204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.3	chr15	-	5969	1	Genic_Genomic	ENSMUSG00000016554.10	novel	NA	NA	NA	NA	-321	467	mono-exon	FALSE	NA	NA	NA	NA	NA	791	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAATGAAAATAAGTTC	9059	False	NA	NA	False	NA	NA	NA	77848699	77842730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_77842700_77848700
ES.12208.32	chr15	-	4503	12	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	1612	junction_5	101.827272321465	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTCCTTCGTCCTGTG	2741	False	NA	-19	True	AATAAA	-16	NA	77855017	77843205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77850411_77850881_77850968_77851502_77852422_77852656_77852790_77854882
ES.12208.35	chr15	-	2624	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	1	-10	intron_retention	FALSE	canonical	3	1461	junction_9	116.924443311854	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTCTTCCTTCGTCCTG	2746	False	NA	-21	True	AATAAA	-14	NA	77855012	77843207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77852422_77852656_77852790_77854882
ES.12208.36	chr15	-	1816	15	NNC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	24	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	596.532172353731	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAAAATTTCATTCCCT	2785	False	NA	-42	True	NA	NA	NA	77854973	77843228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_77843323_77843721_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850409_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.37	chr15	-	1740	14	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	34	514	18	70	5prime_fragment	FALSE	canonical	3	1461	junction_8	111.578507399989	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCAGAGCAGGCCTCTA	2779	False	NA	3	True	NA	NA	NA	77854979	77843711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.38	chr15	-	3121	1	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	-745	-995	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCACAGGTAGTGTCCC	4290	False	NA	NA	False	NA	NA	NA	77853468	77850347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77850300_77853500
ES.12208.4	chr15	-	2189	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	-285	-5	-285	5	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTCCCGTTGTGAT	2460	False	NA	-6	True	AATAAA	-29	NA	77855298	77843192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.5	chr15	-	2657	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	-4	4	intron_retention	FALSE	canonical	3	1461	junction_8	118.384740340815	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCTCCCGTTGTGA	2741	False	NA	-7	True	AATAAA	-28	NA	77855017	77843193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12208.6	chr15	-	1860	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	98	3	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCTGTGCTCCCGTTGTG	3011	False	NA	-8	True	AATAAA	-27	NA	77854747	77843194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
ES.12208.8	chr15	-	2580	14	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1461	junction_8	118.124144904704	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	2758	False	NA	-11	True	AATAAA	-24	NA	77855000	77843197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ES.12209.1	chr15	+	778	5	Antisense	novelGene_ENSMUSG00000019146.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_3	2.38484800354236	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCAGAGTCTGTGTTT	3858	False	NA	NA	False	NA	NA	NA	77885846	77936416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77885969_77896575_77896681_77928329_77928410_77931221_77931384_77936107
ES.12209.2	chr15	+	1328	6	Antisense	novelGene_ENSMUSG00000019146.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATGTGCATGAGTGTT	3868	False	NA	NA	False	NA	NA	NA	77885856	77921515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77885969_77904644_77904704_77905045_77905139_77919000_77919172_77920040_77920294_77920875
ES.12209.3	chr15	+	2569	7	Antisense	novelGene_ENSMUSG00000019146.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	3.51188458428425	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTATGTGTATATA	3870	False	NA	NA	False	NA	NA	NA	77885858	77985244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_77885969_77896575_77896681_77928329_77928410_77931166_77931384_77939716_77939923_77980930_77980990_77983452
ES.12209.4	chr15	+	2267	1	Intergenic	novelGene_10219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTATGGCTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	77922051	77924318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77922100_77924300
ES.12209.5	chr15	+	4494	1	Intergenic	novelGene_10220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATGTGTATATATATA	NA	False	NA	NA	False	NA	NA	NA	77980754	77985248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_77980800_77985200
ES.1221.1	chr1	+	175	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	120598729	120598904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_120598700_120598900
ES.12210.1	chr15	-	3024	5	NIC	ENSMUSG00000016637.8	novel	1013	7	NA	NA	56	0	intron_retention	FALSE	canonical	3	9	junction_3	120.678032383694	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78058251	78043662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78043909_78048389_78048500_78049346_78051652_78052112_78052193_78057968
ES.12210.2	chr15	-	1295	7	NIC	ENSMUSG00000016637.8	novel	1013	7	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.12418021418	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGGCTTCTGTTCTTAG	NA	False	NA	-3	True	AATAAA	-13	NA	78058268	78043663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051652_78052112_78052193_78057968
ES.12210.3	chr15	-	1014	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	-3	2	-3	-2	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACGGCTTCTGTTCTTA	NA	False	NA	-4	True	AATAAA	-12	NA	78058310	78043664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ES.12210.5	chr15	-	6621	5	NNC	ENSMUSG00000016637.8	novel	760	7	NA	NA	-394	-2	intron_retention	FALSE	canonical	1	1	junction_2	138.694583527981	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACGGCTTCTGTTCTTA	NA	False	NA	-4	True	AATAAA	-12	NA	78052877	78043664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78048500_78049346_78049465_78049712_78050234_78051269_78051652_78052112
ES.12210.6	chr15	-	1137	7	NNC	ENSMUSG00000016637.8	novel	1013	7	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.12418021418	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAACGGCTTCTGTTCT	NA	False	NA	-6	True	AATAAA	-10	NA	78058301	78043666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051464_78052112_78052193_78057968
ES.12210.7	chr15	-	5658	1	NIC	ENSMUSG00000016637.8	novel	760	7	NA	NA	1808	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCAACAACGGCTTCTG	NA	False	NA	-10	True	AATAAA	-6	NA	78049328	78043670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78043700_78049300
ES.12210.8	chr15	-	1861	7	NNC	ENSMUSG00000016637.8	novel	375	5	NA	NA	-4	1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.973145143218	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTTGAGTGCTCCGT	NA	False	NA	NA	False	CATAAA	-15	NA	78058311	78046809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78047900_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ES.12210.9	chr15	-	1008	6	ISM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	135	4351	135	-2	5prime_fragment	FALSE	canonical	0	0	junction_2	104.878977874501	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAATGAGTAG	NA	False	NA	NA	False	ATTAAA	-1	NA	78058172	78048013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ES.12211.1	chr15	-	1330	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	25	-211	25	211	multi-exon	FALSE	canonical	3	371	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTCCTACAGATGTG	8109	False	NA	NA	False	NA	NA	NA	78290082	78283544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78284231_78289438
ES.12211.2	chr15	-	1651	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	-506	-1	-506	1	multi-exon	FALSE	canonical	3	371	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGCCTCCTTGCCCG	7578	False	NA	-2	True	AATAAA	-18	NA	78290613	78283754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78284231_78289438
ES.12212.1	chr15	+	4288	5	FSM	ENSMUSG00000033287.18	ENSMUST00000161016.8	750	5	-93	-3445	-30	2	multi-exon	FALSE	canonical	3	98	junction_2	15.305227865014	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTGGGCCACTTC	NA	False	NA	26	True	AATAAA	-33	NA	78312797	78323505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784
ES.12212.2	chr15	+	3438	6	NIC	ENSMUSG00000033287.18	novel	1632	7	NA	NA	-13	-16	intron_retention	FALSE	canonical	2	5	junction_5	47.8020920044301	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGGCTGCCACCCT	NA	False	NA	8	True	AATAAA	-15	NA	78312814	78323487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78321872_78322686
ES.12212.3	chr15	+	3070	6	ISM	ENSMUSG00000033287.18	ENSMUST00000089414.12	1180	7	1	-399	1	5	intron_retention	FALSE	canonical	3	64	junction_5	26.081411004775	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGGGCCACTTCTTC	NA	False	NA	29	True	AATAAA	-36	NA	78312828	78323508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100
ES.12212.4	chr15	+	1459	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	-14	-459	-14	-1	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTTCTCTGGGCCAC	NA	False	NA	23	True	AATAAA	-30	NA	78312847	78323502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
ES.12212.6	chr15	+	2872	7	NIC	ENSMUSG00000033287.18	novel	1180	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	11	junction_6	43.4105082004602	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTTCTCTGGGCCAC	NA	False	NA	23	True	AATAAA	-30	NA	78312857	78323502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357
ES.12212.7	chr15	+	3362	6	NNC	ENSMUSG00000033287.18	novel	986	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_5	49.7216250740058	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTTTTTCTCTGGGCC	NA	False	NA	21	True	AATAAA	-28	NA	78312860	78323500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78320768
ES.12212.8	chr15	+	2779	6	ISM	ENSMUSG00000033287.18	ENSMUST00000162517.9	901	8	97	-809	-1	3	intron_retention	FALSE	canonical	1	3	junction_5	48.5691259958423	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTGGGCCACTTCT	NA	False	NA	27	True	AATAAA	-34	NA	78312860	78323506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321357
ES.12212.9	chr15	+	1497	7	FSM	ENSMUSG00000033287.18	ENSMUST00000166142.11	1632	7	109	26	11	-26	multi-exon	FALSE	canonical	2	4	junction_5	55.6339724349151	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGGCTTGGCCTGG	NA	False	NA	-2	True	AATAAA	-5	NA	78312872	78323477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
ES.12213.1	chr15	-	2651	10	NNC	ENSMUSG00000068227.10	novel	4194	10	NA	NA	-16129	761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.05409255338946	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTACACCACAAACATTG	9768	False	NA	NA	False	AAGAAA	-1	NA	78395600	78364762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78366384_78368135_78368221_78369122_78369244_78369931_78370098_78370580_78370723_78372324_78372431_78374381_78374464_78375064_78375180_78375961_78376080_78395505
ES.12213.2	chr15	-	163	1	Intergenic	novelGene_10221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2443	False	NA	NA	False	NA	NA	NA	78393463	78393300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78393300_78393500
ES.12213.3	chr15	-	1806	1	Intergenic	novelGene_10222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9804	False	NA	NA	False	NA	NA	NA	78395564	78393758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78393800_78395600
ES.12214.1	chr15	-	2400	3	FSM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	0	2	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCTGGTACTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	78413825	78407547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78409599_78411427_78411669_78413717
ES.12215.1	chr15	-	4431	3	FSM	ENSMUSG00000044933.4	ENSMUST00000053239.4	4275	3	-167	11	-167	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGACCTTTTTCTCTGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	78429052	78421218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78424786_78428002_78428150_78428335
ES.12216.1	chr15	-	1807	1	FSM	ENSMUSG00000068226.4	ENSMUST00000180449.2	441	1	-281	-1085	-281	1085	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTTTAATGGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	78439329	78437522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78437500_78439300
ES.12217.1	chr15	-	2361	2	ISM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	10834	2	3023	-2	3prime_fragment	FALSE	canonical	3	21	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTGGAATTTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	78446149	78443368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_78445686_78446105
ES.12217.2	chr15	-	2044	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	-705	1699	-705	1029	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGATTCTTTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	78457688	78445065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
ES.12218.1	chr15	-	362	2	FSM	ENSMUSG00000116097.2	ENSMUST00000229702.2	394	2	32	0	32	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCTGTGGTCGGAGTAT	2885	False	NA	-3	True	NA	NA	NA	78465784	78458610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78458873_78465684
ES.12219.1	chr15	-	210	1	Intergenic	novelGene_10223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACCCAGGTTCAATTCC	NA	False	NA	NA	False	NA	NA	NA	78468904	78468694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78468700_78468900
ES.1222.1	chr1	-	2716	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	-17	-2	-17	2	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTCCTTTTTATTCAT	NA	False	NA	1	True	ATTAAA	-19	NA	121255770	121232079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ES.1222.10	chr1	-	769	5	NIC	ENSMUSG00000003721.15	novel	674	5	NA	NA	-16	8	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	80.1950746617272	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGATATGTTTATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	121247473	121233415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357
ES.1222.11	chr1	-	1310	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-14	8	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGATATGTTTATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	121255767	121233415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
ES.1222.12	chr1	-	1088	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	271	1338	-7	4	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATGAAAGATATGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	121255482	121233419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ES.1222.13	chr1	-	2564	1	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	1	-5468	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTATGTGTTACCTAA	NA	False	NA	NA	False	NA	NA	NA	121255521	121252957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121253000_121255500
ES.1222.2	chr1	-	2115	6	NNC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.0817747590181	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTAGTCCTTTTTATT	NA	False	NA	-2	True	ATTAAA	-16	NA	121255482	121232082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247389_121255416
ES.1222.3	chr1	-	9695	5	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	167	junction_4	17.0440605490593	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTAGTCCTTTTTATT	NA	False	NA	-2	True	ATTAAA	-16	NA	121255481	121232082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121247702_121255419
ES.1222.4	chr1	-	2047	5	FSM	ENSMUSG00000003721.15	ENSMUST00000186915.2	674	5	-33	-1340	-6	-2	multi-exon	FALSE	canonical	3	11	junction_4	81.0524521529115	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTAGTCCTTTTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	121255481	121232083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121255419
ES.1222.5	chr1	-	2355	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTTAGTCCTTTTT	NA	False	NA	-5	True	ATTAAA	-13	NA	121255482	121232085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
ES.1222.6	chr1	-	2428	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTTAGTCCTTTTT	NA	False	NA	-5	True	ATTAAA	-13	NA	121255520	121232085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
ES.1222.7	chr1	-	2091	4	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	79.6673640136844	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTTAGTCCTTTTT	NA	False	NA	-5	True	ATTAAA	-13	NA	121255510	121232085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121233677_121234592_121234693_121247325_121247635_121255419
ES.1222.8	chr1	-	2456	6	NNC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.4340238375555	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTTAGTCCTTTTT	NA	False	NA	-5	True	ATTAAA	-13	NA	121255522	121232085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121233677_121234598_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ES.1222.9	chr1	-	12036	4	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	5644	6	811	-6	intron_retention	FALSE	canonical	3	178	junction_1	13.1233464566864	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTTAGTCCTTT	NA	False	NA	-7	True	ATTAAA	-11	NA	121250109	121232087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929
ES.12220.1	chr15	+	3042	15	NNC	ENSMUSG00000018008.9	novel	2791	13	NA	NA	-5187	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.16057691494799	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTCTTCTGTAATTGTG	NA	False	NA	NA	False	AATAAA	-32	NA	78476059	78506225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78476226_78480604_78480781_78481343_78481420_78486892_78486976_78488835_78488901_78490046_78490114_78491156_78491276_78492325_78492407_78493961_78494075_78495648_78495798_78499916_78500029_78502575_78502653_78503461_78503534_78503988_78504144_78504694
ES.12220.2	chr15	+	2733	13	NNC	ENSMUSG00000018008.9	novel	1223	3	NA	NA	2655	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.21335164821342	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGAAGAAAGCTATTCT	NA	False	NA	NA	False	AATAAA	-20	NA	78484003	78506213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78484125_78486892_78486976_78488835_78488901_78490046_78490114_78491156_78491276_78492325_78492407_78493961_78494075_78495648_78495798_78499916_78500029_78502575_78502653_78503461_78503534_78503988_78504144_78504694
ES.12221.1	chr15	-	177	1	Intergenic	novelGene_10224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCAGGAGACTTGGCTC	9816	False	NA	NA	False	NA	NA	NA	78534860	78534683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78534700_78534900
ES.12222.1	chr15	-	174	1	Intergenic	novelGene_10225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	78550652	78550478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78550500_78550700
ES.12223.1	chr15	-	4852	2	FSM	ENSMUSG00000043460.8	ENSMUST00000088592.6	5102	2	229	21	229	-21	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTGCAAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	78602742	78554227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78558941_78602603
ES.12224.2	chr15	-	1892	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	-26	-1	-26	1	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCCAGCTTCCTGCTA	NA	False	NA	-3	True	ATTAAA	-18	NA	78657701	78640080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
ES.12224.3	chr15	-	9079	5	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	153	junction_2	8.25757228245687	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657670	78640081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78640845_78641496_78641583_78643392_78651121_78651341_78651391_78657217
ES.12224.4	chr15	-	3335	7	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	144	junction_4	12.3017613914973	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657698	78640081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78640845_78641496_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
ES.12224.5	chr15	-	1732	9	NNC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8075273544511	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGTCCAGCTTCCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	78657663	78640083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78640637_78640755_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
ES.12224.6	chr15	-	1433	5	NNC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	5829	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.801056582261	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGTCCAGCTTCCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	78645535	78640083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78645201
ES.12224.7	chr15	-	3962	6	NNC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	-25	-2	intron_retention	FALSE	canonical	0	0	junction_5	62.5223160159635	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGTCCAGCTTCCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	78657700	78640083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657242
ES.12225.1	chr15	-	2176	7	NNC	ENSMUSG00000033170.15	novel	3220	20	NA	NA	10224	14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.5831646416839	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGCTTCCATGCCTGG	9193	False	NA	-1	True	ATTAAA	-26	NA	78664491	78659323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660104_78660166_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441
ES.12225.11	chr15	-	4024	18	NNC	ENSMUSG00000033170.15	novel	3220	20	NA	NA	3300	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.6097366716497	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	NA	False	NA	-13	True	ATTAAA	-14	NA	78683569	78659335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660563_78660628_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664510_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671683_78672901_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295
ES.12225.12	chr15	-	4020	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	134	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTGACCTTATGCTTG	NA	False	NA	-14	True	ATTAAA	-13	NA	78687108	78659336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660695_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.15	chr15	-	4660	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGACCTTATGCTT	NA	False	NA	-15	True	ATTAAA	-12	NA	78687243	78659337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660621_78660687_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.16	chr15	-	4510	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	136	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.5931496906657	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGACCTTATGCTT	NA	False	NA	-15	True	ATTAAA	-12	NA	78687106	78659337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660104_78660170_78661031_78661664_78661778_78662158_78662275_78662403_78662557_78663594_78663689_78664441_78664505_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.17	chr15	-	3951	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.0709876482726	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGACCTTATGCTT	NA	False	NA	-15	True	ATTAAA	-12	NA	78687101	78659337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660145_78660716_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78672976_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.2	chr15	-	4692	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-18	14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGCTTCCATGCCTGG	NA	False	NA	-1	True	ATTAAA	-26	NA	78687260	78659323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660188_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.20	chr15	-	1225	3	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	14043	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGACCTTATGCTT	9876	False	NA	-15	True	ATTAAA	-12	NA	78660672	78659337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660188_78660365_78660408
ES.12225.21	chr15	-	2252	6	NNC	ENSMUSG00000033170.15	novel	3220	20	NA	NA	11130	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1254333299951	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGTGACCTTATGCT	9659	False	NA	-16	True	ATTAAA	-11	NA	78663585	78659338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660188_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663347
ES.12225.22	chr15	-	4622	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	36	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGTGACCTTATGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	78687206	78659338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660673_78660739_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.23	chr15	-	3590	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	129	-435	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACATATGTCCTCAT	NA	False	NA	NA	False	AATAGA	-18	NA	78687113	78659772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660694_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.24	chr15	-	4205	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	17	-438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGCACATATGTCCT	NA	False	NA	NA	False	AATAGA	-15	NA	78687225	78659775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660123_78660188_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.3	chr15	-	2886	11	NNC	ENSMUSG00000033170.15	novel	3220	20	NA	NA	2981	12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.4377614047656	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGCTTCCATGCCT	1950	False	NA	-3	True	ATTAAA	-24	NA	78671734	78659325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660150_78660215_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555
ES.12225.5	chr15	-	4531	21	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-2	9	intron_retention	TRUE	non_canonical	0	0	junction_1	12.6011904199564	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATGCTTGCTTCCATG	NA	False	NA	-6	True	ATTAAA	-21	NA	78687244	78659328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660146_78660717_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.6	chr15	-	4208	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-47	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTATGCTTGCTTCCA	NA	False	NA	-8	True	ATTAAA	-19	NA	78687289	78659330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660145_78660716_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12225.8	chr15	-	4294	23	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-3533	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.3861248439376	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	NA	False	NA	-13	True	ATTAAA	-14	NA	78690775	78659335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660145_78660716_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78689470_78689660_78690638
ES.12225.9	chr15	-	4622	22	NNC	ENSMUSG00000033170.15	novel	4726	21	NA	NA	-4	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.3416960065244	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGACCTTATGCTTGC	NA	False	NA	-13	True	ATTAAA	-14	NA	78687246	78659335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78660607_78660716_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ES.12226.1	chr15	+	177	1	Intergenic	novelGene_10226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAACAAAACA	9332	False	NA	NA	False	NA	NA	NA	78696525	78696702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_78696500_78696700
ES.12227.1	chr15	-	213	1	Intergenic	novelGene_10227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAATTGAGATGT	8780	False	NA	NA	False	GATAAA	-9	NA	78702020	78701807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78701800_78702000
ES.12228.1	chr15	-	244	1	Intergenic	novelGene_10228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCAAGGTGTTTGGTAA	4887	False	NA	NA	False	AATAAA	-25	NA	78705913	78705669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78705700_78705900
ES.12229.1	chr15	+	156	1	Intergenic	novelGene_10229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	78708889	78709045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_78708900_78709000
ES.1223.1	chr1	+	1011	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTGTGGTGGCGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121260602	121261613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_121260600_121261600
ES.12230.1	chr15	+	2683	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	-117	-6	-117	6	multi-exon	FALSE	canonical	3	20	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGGGAAAAGCACAGAC	NA	False	NA	NA	False	AATAAA	-26	NA	78726706	78735103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78726926_78731294_78732020_78733364
ES.12230.2	chr15	+	2531	1	NIC	ENSMUSG00000049521.3	novel	2560	3	NA	NA	5742	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGACCTTGGGGAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	78732565	78735096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78732600_78735100
ES.12231.1	chr15	-	568	4	NNC	ENSMUSG00000043501.6	novel	592	4	NA	NA	2902	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCAAGAACTGTTAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	78736827	78735067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78735351_78735463_78735624_78736469_78736553_78736785
ES.12232.1	chr15	+	377	1	Antisense	novelGene_ENSMUSG00000097085.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	78746947	78747324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_78746900_78747300
ES.12233.1	chr15	+	181	1	Intergenic	novelGene_10230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTCTACTTCA	NA	False	NA	NA	False	NA	NA	NA	78751493	78751674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_78751500_78751700
ES.12234.1	chr15	-	182	1	Intergenic	novelGene_10231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAGGTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	78755146	78754964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78755000_78755100
ES.12235.1	chr15	+	2873	18	NNC	ENSMUSG00000033128.10	novel	860	6	NA	NA	-3284	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	154.207068804268	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCTCTTGTCACCCTT	NA	False	NA	19	True	AATAAA	-19	NA	78758105	78778786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78758254_78759969_78760088_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.10	chr15	+	3952	13	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	256	4	-105	0	intron_retention	FALSE	canonical	3	379	junction_6	60.3404691912668	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761645	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113
ES.12235.101	chr15	+	3809	13	NIC	ENSMUSG00000116069.2	novel	2762	17	NA	NA	1817	-6982	intron_retention	FALSE	canonical	3	401	junction_12	36.418859583097	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAACTGGCCAAACGAAA	6114	False	NA	86	True	AATAAA	-19	NA	78785683	78796250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78791531_78792160_78792713_78794207
ES.12235.102	chr15	+	2168	15	ISM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	2651	1	-1074	-1	3prime_fragment	FALSE	canonical	3	356	junction_14	40.821475440543	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAGTAACTGGCCAAAC	7184	False	NA	82	True	AATAAA	-15	NA	78786753	78796246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.103	chr15	+	4833	12	NNC	ENSMUSG00000116069.2	novel	2762	17	NA	NA	3261	-6982	intron_retention	FALSE	canonical	0	0	junction_11	130.524434873987	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAACTGGCCAAACGAAA	7558	False	NA	86	True	AATAAA	-19	NA	78787127	78796250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78793522_78793736
ES.12235.104	chr15	+	3571	3	NNC	ENSMUSG00000116069.2	novel	2762	17	NA	NA	8293	-6993	intron_retention	FALSE	canonical	0	0	junction_2	206	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAACAGGAGTAACTG	NA	False	NA	75	True	AATAAA	-8	NA	78792159	78796239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78792259_78792552_78793522_78793736
ES.12235.105	chr15	+	2116	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	-114	-1	-114	1	multi-exon	FALSE	canonical	3	228	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTGTGTGTGTGCCT	NA	False	NA	25	True	AATAAA	-19	NA	78798004	78803718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78798732_78802329
ES.12235.106	chr15	+	5585	1	NIC	ENSMUSG00000116165.2	novel	2001	2	NA	NA	12	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTGTGTGTGTGTG	NA	False	NA	22	True	AATAAA	-16	NA	78798130	78803715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78798100_78803700
ES.12235.107	chr15	+	1659	3	NNC	ENSMUSG00000116165.2	novel	2001	2	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	113.5	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	False	NA	24	True	AATAAA	-18	NA	78798163	78803717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78798334_78798630_78798732_78802329
ES.12235.108	chr15	+	574	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	-31	257	-31	17	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGAGTGTTTGTGTGT	NA	False	NA	26	True	AATAAA	-37	NA	78810893	78814408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ES.12235.11	chr15	+	2686	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	120.74585914225	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761718	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767552_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.111	chr15	+	637	5	NNC	ENSMUSG00000068220.7	novel	628	5	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1007.87037236938	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTCATGGGAGAGTG	NA	False	NA	17	True	AATAAA	-28	NA	78810926	78814399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78811005_78812169_78812250_78812764_78812870_78813832_78814005_78814197
ES.12235.112	chr15	+	354	3	NIC	ENSMUSG00000068220.7	novel	800	4	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	982.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGCCCTTTCATGGGA	NA	False	NA	12	True	AATAAA	-23	NA	78810927	78814394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78811005_78812169_78812250_78814197
ES.12235.113	chr15	+	1682	3	NIC	ENSMUSG00000068220.7	novel	800	4	NA	NA	11	3	intron_retention	FALSE	canonical	3	1912	junction_1	76.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGCCCTTTCATGGGA	NA	False	NA	12	True	AATAAA	-23	NA	78810936	78814394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78812250_78813832_78814005_78814197
ES.12235.114	chr15	+	4243	3	NIC	ENSMUSG00000033099.11	novel	742	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	420	junction_1	2	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819125	78825064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78819276_78820678_78824367_78824659
ES.12235.115	chr15	+	949	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	-1	2773	-1	1	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819131	78825065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ES.12235.116	chr15	+	1517	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	3	2201	3	573	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAGCCTCAAGCAGTGC	NA	False	NA	NA	False	AATAGA	-15	NA	78819135	78825637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ES.12235.117	chr15	+	1990	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	3	1728	3	1046	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAAGGATGGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	78819135	78826110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ES.12235.118	chr15	+	1072	6	NNC	ENSMUSG00000033099.11	novel	3721	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.00518511406	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819140	78825064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824526
ES.12235.12	chr15	+	6439	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-32	0	intron_retention	FALSE	canonical	3	379	junction_6	57.854717762227	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761718	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78772449_78772617_78772700_78773202_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.120	chr15	+	1323	6	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	182.547528057764	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819376	78825065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ES.12235.121	chr15	+	1371	7	NIC	ENSMUSG00000033099.11	novel	681	4	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	219.064424821152	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTCTGTGCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	78819419	78825065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78819895_78820008_78820100_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ES.12235.122	chr15	+	2593	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	-17	-6	-17	1	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGATGCTGGGCTTC	NA	False	NA	15	True	AATAAA	-19	NA	78867223	78890070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ES.12235.123	chr15	+	1707	8	FSM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	-37	-10	-1	10	multi-exon	FALSE	canonical	3	19	junction_7	63.6226118191786	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCTTCTCAGACT	NA	False	NA	NA	False	AATAAA	-35	NA	78867239	78879069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497
ES.12235.124	chr15	+	3137	13	ISM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	32	-3	-4	0	intron_retention	FALSE	canonical	3	125	junction_8	27.413880304206	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGGATGCTGGGC	NA	False	NA	12	True	AATAAA	-16	NA	78867272	78890067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644
ES.12235.126	chr15	+	3028	12	NIC	ENSMUSG00000033088.20	novel	2570	14	NA	NA	12	0	intron_retention	FALSE	canonical	3	125	junction_8	26.7526163082948	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78867288	78890069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78886599_78887905_78887993_78888644_78888806_78889401
ES.12235.128	chr15	+	2578	15	NNC	ENSMUSG00000033088.20	novel	2570	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	61.9924287674696	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGGATGCTGGGC	NA	False	NA	12	True	AATAAA	-16	NA	78867292	78890067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497_78878555_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ES.12235.129	chr15	+	2633	12	NIC	ENSMUSG00000033088.20	novel	7327	25	NA	NA	4215	0	intron_retention	FALSE	canonical	3	125	junction_6	27.7569141114738	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	NA	False	NA	14	True	AATAAA	-18	NA	78872119	78890069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78872149_78875016_78875086_78875184_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ES.12235.13	chr15	+	2568	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-22	1	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	125.745669242854	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCTGCTCTTGTCAC	NA	False	NA	15	True	AATAAA	-15	NA	78761728	78778782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.130	chr15	+	1354	4	ISM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	8211	-1	7583	1	3prime_fragment	FALSE	canonical	3	19	junction_3	85.2447456836295	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATACAGAAATGGATTCT	NA	False	NA	NA	False	AATAAA	-26	NA	78875487	78879060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78875639_78877103_78877633_78878241_78878353_78878497
ES.12235.131	chr15	+	2053	3	ISM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	8252	-596	7624	596	intron_retention	FALSE	canonical	3	189	junction_1	10	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAAGGGAGAGAGGGTT	NA	False	NA	NA	False	NA	NA	NA	78875528	78879655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78875639_78877103_78877633_78878241
ES.12235.132	chr15	+	3383	1	NIC	ENSMUSG00000033088.20	novel	7187	24	NA	NA	-7956	2549	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAACAAGAAATT	662	False	NA	NA	False	NA	NA	NA	78878225	78881608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78878200_78881600
ES.12235.133	chr15	+	918	3	ISM	ENSMUSG00000033088.20	ENSMUST00000229535.2	676	5	1722	-580	1522	0	3prime_fragment	FALSE	canonical	3	145	junction_1	17	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGATGCTGGGCTT	2602	False	NA	14	True	AATAAA	-18	NA	78887903	78890069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78887993_78888644_78888806_78889401
ES.12235.14	chr15	+	2690	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	123.887407930548	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761733	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776651_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.15	chr15	+	2623	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	127.200873512025	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761734	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.16	chr15	+	2654	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_16	122.880642673083	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761741	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777823_78777933
ES.12235.17	chr15	+	2674	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.987328236266	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTCTTGTCACCCTTG	NA	False	NA	20	True	AATAAA	-20	NA	78761741	78778787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761808_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.18	chr15	+	3043	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	379	junction_6	56.0576687191166	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761742	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.19	chr15	+	2663	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	123.887407930548	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTAGCTGCTCTTGT	NA	False	NA	12	True	AATAAA	-12	NA	78761742	78778779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776275_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.2	chr15	+	4374	18	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-1610	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.191571421753	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTTGTCACCCTTGT	NA	False	NA	21	True	AATAAA	-21	NA	78759779	78778788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78760088_78760360_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.20	chr15	+	2935	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-7	0	intron_retention	FALSE	canonical	1	2	junction_10	165.847640923831	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761743	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773919_78774244_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738
ES.12235.23	chr15	+	2569	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	126.966907324529	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761747	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777543_78777933
ES.12235.24	chr15	+	2774	18	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.300431040529	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761748	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78768897_78768999_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.26	chr15	+	3392	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	379	junction_5	54.4306286325386	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761748	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.27	chr15	+	4743	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2	1	intron_retention	FALSE	canonical	3	379	junction_6	57.9725480424193	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCTGCTCTTGTCAC	NA	False	NA	15	True	AATAAA	-15	NA	78761748	78778782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.28	chr15	+	5101	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_7	127.503307146651	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761750	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770917_78771156_78772449_78772617_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.29	chr15	+	4957	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	379	junction_5	56.0741582593069	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761751	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.3	chr15	+	5755	14	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	379	junction_5	54.7787372907737	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761365	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.30	chr15	+	2847	18	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.190053129224	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761751	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78771749_78771927_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.31	chr15	+	4606	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	379	junction_6	57.6093458971188	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761751	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78775702_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.32	chr15	+	3175	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	379	junction_6	56.337317413357	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761751	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.33	chr15	+	3497	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	113734	intron_retention	FALSE	non_canonical	0	0	junction_15	125.971883988276	1577	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCAGCAGGTGTC	NA	False	NA	NA	False	NA	NA	NA	78761751	78892519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78778787_78892497
ES.12235.35	chr15	+	4240	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	379	junction_6	56.0576687191166	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761751	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.37	chr15	+	5102	14	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	5	1	intron_retention	FALSE	canonical	3	379	junction_6	59.7486847172705	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCTGCTCTTGTCAC	NA	False	NA	15	True	AATAAA	-15	NA	78761755	78778782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78773311_78773915_78775702_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.38	chr15	+	5453	14	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	379	junction_5	58.0744268439598	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761755	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.4	chr15	+	2864	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	127.304185145484	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761367	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78777366_78777537_78777738_78777850_78777933
ES.12235.40	chr15	+	3022	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	126.842789835817	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761760	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772760_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.41	chr15	+	4763	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	10	-1	intron_retention	FALSE	canonical	1	1	junction_10	131.637876814559	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761760	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.42	chr15	+	3523	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	18	-1	intron_retention	FALSE	canonical	3	379	junction_6	57.9725480424193	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761768	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78773311_78773915_78774069_78775636_78775702_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.43	chr15	+	2524	16	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	119.609810077045	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761768	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765293_78767490_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.44	chr15	+	5325	14	NIC	ENSMUSG00000033128.10	novel	2665	17	NA	NA	20	0	intron_retention	FALSE	canonical	3	379	junction_6	57.9272140722952	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761770	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.45	chr15	+	6483	9	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	20	0	intron_retention	FALSE	canonical	3	379	junction_6	67.4105889308201	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761770	78778785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78773311_78773915
ES.12235.46	chr15	+	2947	15	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	26	-1	intron_retention	FALSE	canonical	1	1	junction_11	131.665256601422	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761776	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.47	chr15	+	6566	12	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	27	-2	intron_retention	FALSE	canonical	3	379	junction_5	62.5866671831222	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78761777	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78773311_78773915_78774069_78775636_78775702_78776113_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.48	chr15	+	2278	13	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	380	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	122.125931134856	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCTGCTCTTGTCAC	NA	False	NA	15	True	AATAAA	-15	NA	78768365	78778782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777553_78777738_78777850_78777933
ES.12235.49	chr15	+	3498	10	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	9459	4	2863	0	3prime_fragment	FALSE	canonical	3	388	junction_5	33.5827704207947	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78770848	78778781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.5	chr15	+	3130	16	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	-13	1	-13	-1	intron_retention	FALSE	canonical	3	379	junction_6	54.8406175506197	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761376	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738
ES.12235.50	chr15	+	4160	8	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-4045	-2	intron_retention	FALSE	canonical	3	388	junction_3	34.730448912052	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	NA	False	NA	16	True	AATAAA	-16	NA	78772361	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78772449_78772617_78772700_78773202_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.51	chr15	+	1792	7	ISM	ENSMUSG00000033128.10	ENSMUST00000230192.2	2665	17	12079	2	-2577	-2	3prime_fragment	FALSE	canonical	3	388	junction_2	32.2011904541846	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTAGCTGCTCTTGT	1170	False	NA	12	True	AATAAA	-12	NA	78773829	78778779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.52	chr15	+	1548	6	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2516	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	174.436922697002	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	1231	False	NA	17	True	AATAAA	-17	NA	78773890	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78774069_78775636_78775702_78776113_78776287_78777366_78777537_78777738_78777850_78777933
ES.12235.54	chr15	+	3942	4	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2377	-2	intron_retention	FALSE	canonical	3	409	junction_3	32.5610537640019	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	1370	False	NA	16	True	AATAAA	-16	NA	78774029	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.55	chr15	+	3146	4	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	-2135	-2	intron_retention	FALSE	canonical	1	2	junction_1	212.938697490355	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCTGCTCTTGTCACC	1612	False	NA	16	True	AATAAA	-16	NA	78774271	78778783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78776287_78777366_78777537_78777738_78777850_78777933
ES.12235.56	chr15	+	4310	19	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-1855	11	intron_retention	FALSE	non_canonical	0	0	junction_1	114.01169530652	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAACTTCCTCTCCT	2543	False	NA	98	True	AATAAA	-31	NA	78782112	78796262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78783797_78783866_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.57	chr15	+	3678	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	-1303	0	-1168	0	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	3230	False	NA	83	True	AATAAA	-16	NA	78782799	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.58	chr15	+	4036	19	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-1156	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	175.756714920102	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAGTAACTGGCCAA	3242	False	NA	80	True	AATAAA	-13	NA	78782811	78796244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78782920_78783678_78783797_78783866_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789266_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.59	chr15	+	3863	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-1156	-13	intron_retention	FALSE	canonical	3	356	junction_16	43.0032248064026	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGAACAAAACAGGAGT	3242	False	NA	70	True	AATAAA	-3	NA	78782811	78796234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.60	chr15	+	4353	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-669	1	intron_retention	FALSE	non_canonical	0	0	junction_1	116.070942392229	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTGGCCAAACGAAAAC	3729	False	NA	88	True	AATAAA	-21	NA	78783298	78796252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78783797_78783866_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.62	chr15	+	2510	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-47	-7	intron_retention	FALSE	canonical	3	13	junction_3	114.145690914398	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4351	False	NA	76	True	AATAAA	-9	NA	78783920	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786794_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.63	chr15	+	4074	16	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-38	-7	intron_retention	FALSE	canonical	3	401	junction_15	46.255810445824	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4360	False	NA	76	True	AATAAA	-9	NA	78783929	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792713_78794207
ES.12235.64	chr15	+	3150	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-10	0	intron_retention	FALSE	canonical	3	356	junction_16	51.9494571073654	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4388	False	NA	83	True	AATAAA	-16	NA	78783957	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.65	chr15	+	5036	17	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_16	119.435374130741	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4391	False	NA	83	True	AATAAA	-16	NA	78783960	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78793522_78793736
ES.12235.66	chr15	+	2876	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-2	-7	intron_retention	FALSE	canonical	0	0	junction_17	116.070942392229	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4396	False	NA	76	True	AATAAA	-9	NA	78783965	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794671_78795538
ES.12235.67	chr15	+	2370	18	NNC	ENSMUSG00000022436.17	novel	1923	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	117.172454455153	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792606_78794244_78794300_78795538
ES.12235.68	chr15	+	2621	19	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_3	148.571178435551	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4400	False	NA	87	True	AATAAA	-20	NA	78783969	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78785913_78786023_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.69	chr15	+	1920	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	2	1	2	-1	multi-exon	FALSE	canonical	3	8	junction_17	114.336569876277	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAACTGGCCAAACGAAA	4400	False	NA	86	True	AATAAA	-19	NA	78783969	78796250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
ES.12235.7	chr15	+	2891	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	122.617912002081	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761390	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776700_78777366_78777537_78777738_78777850_78777933
ES.12235.70	chr15	+	3836	16	NIC	ENSMUSG00000022436.17	novel	1923	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	401	junction_15	47.5148631716668	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4400	False	NA	87	True	AATAAA	-20	NA	78783969	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.71	chr15	+	2587	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	2	-6	intron_retention	FALSE	canonical	3	356	junction_16	51.9930509178871	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACAGGAGTAACTGGC	4400	False	NA	77	True	AATAAA	-10	NA	78783969	78796241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.73	chr15	+	4154	16	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	5	-7	intron_retention	FALSE	canonical	3	401	junction_15	46.8877619664473	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4403	False	NA	76	True	AATAAA	-9	NA	78783972	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.74	chr15	+	3414	16	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	21	1	intron_retention	FALSE	canonical	3	356	junction_15	52.7598332067113	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGTAACTGGCCAAACGA	4419	False	NA	84	True	AATAAA	-17	NA	78783988	78796248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78792713_78794207_78794300_78795538
ES.12235.75	chr15	+	3686	17	NNC	ENSMUSG00000022436.17	novel	1923	18	NA	NA	27	0	intron_retention	FALSE	canonical	3	13	junction_3	116.393980058034	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4425	False	NA	87	True	AATAAA	-20	NA	78783994	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786794_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.76	chr15	+	3203	16	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	27	1	intron_retention	FALSE	canonical	3	356	junction_15	53.6152548772787	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTGGCCAAACGAAAAC	4425	False	NA	88	True	AATAAA	-21	NA	78783994	78796252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.77	chr15	+	2885	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	38	-4	intron_retention	FALSE	canonical	3	356	junction_16	51.5939298149501	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGGAGTAACTGGCCA	4436	False	NA	79	True	AATAAA	-12	NA	78784005	78796243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.78	chr15	+	2458	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_6	117.316594695735	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4440	False	NA	83	True	AATAAA	-16	NA	78784009	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787762_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.79	chr15	+	2561	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	46	0	intron_retention	FALSE	canonical	3	356	junction_16	51.6271186005959	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4444	False	NA	87	True	AATAAA	-20	NA	78784013	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.8	chr15	+	2900	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	126.966907324529	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	False	NA	17	True	AATAAA	-17	NA	78761411	78778784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777933
ES.12235.83	chr15	+	2398	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	47	0	intron_retention	FALSE	canonical	0	0	junction_7	118.174923312859	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4445	False	NA	87	True	AATAAA	-20	NA	78784014	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.84	chr15	+	2270	17	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	47	0	intron_retention	FALSE	canonical	0	0	junction_15	120.726948498461	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4445	False	NA	87	True	AATAAA	-20	NA	78784014	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78794244_78794300_78795538
ES.12235.87	chr15	+	2508	17	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	47	0	intron_retention	FALSE	canonical	3	13	junction_3	117.5648092543	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4445	False	NA	83	True	AATAAA	-16	NA	78784014	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786794_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.88	chr15	+	2530	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_4	115.488791229513	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4446	False	NA	87	True	AATAAA	-20	NA	78784015	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78786989_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.89	chr15	+	3888	14	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	48	0	intron_retention	FALSE	canonical	3	356	junction_13	55.9937655024908	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4446	False	NA	83	True	AATAAA	-16	NA	78784015	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790704_78791413_78792713_78794207_78794300_78795538
ES.12235.9	chr15	+	2939	17	NNC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	121.399633828731	555	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCTGCTCTTGTCAC	NA	False	NA	15	True	AATAAA	-15	NA	78761430	78778782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767516_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ES.12235.91	chr15	+	2455	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	57	-7	intron_retention	FALSE	non_canonical	0	0	junction_17	116.070942392229	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4455	False	NA	76	True	AATAAA	-9	NA	78784024	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795529
ES.12235.92	chr15	+	3783	18	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-57	-1	intron_retention	FALSE	canonical	1	1	junction_3	152.50526112656	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAACTGGCCAAACGAAA	4476	False	NA	86	True	AATAAA	-19	NA	78784045	78796250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78785913_78786023_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
ES.12235.94	chr15	+	3434	16	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-56	0	intron_retention	FALSE	canonical	3	356	junction_15	53.6256986486475	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4477	False	NA	83	True	AATAAA	-16	NA	78784046	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790538_78790622_78790704_78791413_78792259_78792552_78792713_78794207_78794300_78795538
ES.12235.95	chr15	+	2724	17	NIC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-55	0	intron_retention	FALSE	canonical	3	356	junction_16	51.1418065285144	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4478	False	NA	83	True	AATAAA	-16	NA	78784047	78796247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792713_78794207_78794300_78795538
ES.12235.96	chr15	+	1951	19	NNC	ENSMUSG00000022436.17	novel	2375	18	NA	NA	-55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	114.01169530652	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	4478	False	NA	76	True	AATAAA	-9	NA	78784047	78796240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538_78795575_78796046
ES.12235.98	chr15	+	3167	19	Fusion	ENSMUSG00000022436.17_ENSMUSG00000116165.2	novel	1923	18	NA	NA	-12	0	multi-exon	FALSE	canonical	1	2	junction_17	121.398791866586	629	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	4521	False	NA	24	True	AATAAA	-18	NA	78784090	78803717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78798630_78798732_78802329
ES.12235.99	chr15	+	2354	18	NIC	ENSMUSG00000022436.17	novel	598	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	3	junction_1	114.52126923531	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	5057	False	NA	87	True	AATAAA	-20	NA	78784626	78796251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78784661_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ES.12236.1	chr15	-	1404	2	Antisense	novelGene_ENSMUSG00000116069.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGTCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	78783908	78781101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_78782247_78783649
ES.12236.2	chr15	-	1352	1	Intergenic	novelGene_10232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	78783773	78782421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78782400_78783800
ES.12237.1	chr15	-	2291	1	Intergenic	novelGene_10233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTTAATGCAATGCTG	NA	False	NA	NA	False	NA	NA	NA	78807623	78805332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78805300_78807600
ES.12238.1	chr15	-	180	1	Intergenic	novelGene_10234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAACAAAAT	7092	False	NA	NA	False	NA	NA	NA	78848626	78848446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78848400_78848600
ES.12239.1	chr15	-	3082	5	NNC	ENSMUSG00000116505.2	novel	712	3	NA	NA	15793	11903	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCAAACTTC	NA	False	NA	NA	False	CATAAA	-8	NA	78879448	78867251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78867408_78872090_78872147_78875014_78875084_78875182_78875639_78877103
ES.1224.1	chr1	+	7344	25	NNC	ENSMUSG00000026339.19	novel	3040	4	NA	NA	-11305	34	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.6810449087062	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCCACTGGTCTCT	NA	False	NA	44	True	NA	NA	NA	121347472	121434223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121347575_121356627_121356771_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.11	chr1	+	779	5	FSM	ENSMUSG00000026339.19	ENSMUST00000128924.2	762	5	-18	1	-5	-1	multi-exon	FALSE	canonical	2	2	junction_4	38.3861954353385	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTGAGGATGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	121358818	121371750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121371460
ES.1224.12	chr1	+	7383	25	NNC	ENSMUSG00000026339.19	novel	7274	24	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	22.3186752270131	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTCATTTAAGAA	NA	False	NA	8	True	NA	NA	NA	121358821	121434187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121417353_121417509_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.13	chr1	+	3148	24	NNC	ENSMUSG00000026339.19	novel	7274	24	NA	NA	-2	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.401000091727	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACCATTGTGCCTTTT	NA	False	NA	NA	False	NA	NA	NA	121358821	121429490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390214_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418964_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.16	chr1	+	7222	24	NNC	ENSMUSG00000026339.19	novel	7274	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0530618865128	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	10	True	NA	NA	NA	121358823	121434189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121358987_121362267_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.17	chr1	+	7155	18	NNC	ENSMUSG00000026339.19	novel	7274	24	NA	NA	25007	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	18.6482649452202	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGGTTTCATTTAAGA	NA	False	NA	7	True	NA	NA	NA	121383845	121434186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390211_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.18	chr1	+	6101	12	ISM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	46784	3	-13384	-3	3prime_fragment	FALSE	canonical	3	60	junction_9	9.95278108066632	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGGTTTCATTTAAGA	NA	False	NA	7	True	NA	NA	NA	121405561	121434186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.19	chr1	+	7373	3	ISM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	63347	3	3179	-3	intron_retention	FALSE	canonical	3	60	junction_1	10	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGGTTTCATTTAAGA	NA	False	NA	7	True	NA	NA	NA	121422124	121434186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_121422163_121424712_121424798_121426936
ES.1224.20	chr1	+	5832	2	ISM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	67712	0	7544	0	3prime_fragment	FALSE	canonical	3	79	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	10	True	NA	NA	NA	121426489	121434189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_121427051_121428918
ES.1224.21	chr1	+	1905	1	Genic_Genomic	ENSMUSG00000026339.19	novel	NA	NA	NA	NA	14238	899	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGTATGGTCTCAGT	2043	False	NA	NA	False	NA	NA	NA	121433183	121435088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_121433200_121435100
ES.1224.3	chr1	+	7313	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	0	-39	0	39	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCACTGGTCTCTTTTCT	NA	False	NA	49	True	NA	NA	NA	121358777	121434228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.4	chr1	+	2165	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	17	5092	-9	-220	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGATGTTGTCTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	121358794	121429097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.5	chr1	+	7221	24	NNC	ENSMUSG00000026339.19	novel	7274	24	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	18.4788235208456	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	10	True	NA	NA	NA	121358803	121434189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409788_121410337_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.1224.9	chr1	+	2373	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	36	4865	-10	7	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAGCAACTGCTAAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	121358813	121429324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ES.12240.1	chr15	-	177	1	Intergenic	novelGene_10235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTATCATGCT	NA	False	NA	NA	False	NA	NA	NA	78905643	78905466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78905500_78905600
ES.12241.1	chr15	+	2555	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	-496	-4	-496	4	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCGTTTTTCTTTAA	651	False	NA	25	True	AATAAA	-21	NA	78912153	78914708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78912200_78914700
ES.12241.2	chr15	+	990	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	0	1065	0	-1065	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGTGGAATGACTCC	1147	False	NA	22	True	ATTAAA	-27	NA	78912649	78913639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78912600_78913600
ES.12241.3	chr15	+	1951	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	2	102	2	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTACCCCACCCCTTT	1149	False	NA	-81	True	AATAAA	-14	NA	78912651	78914602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78912700_78914600
ES.12241.4	chr15	+	1313	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	2	740	2	-740	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCCCTGGGGCTGCCC	1149	False	NA	NA	False	NA	NA	NA	78912651	78913964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78912700_78914000
ES.12242.1	chr15	+	1589	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	-109	890	-109	-890	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTCTGCTTTATTCT	523	False	NA	15	True	NA	NA	NA	78914964	78921663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.10	chr15	+	1741	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	7	890	7	-890	intron_retention	FALSE	canonical	3	1189	junction_6	79.2711698371289	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTCTGCTTTATTCT	639	False	NA	15	True	NA	NA	NA	78915080	78921663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ES.12242.11	chr15	+	1401	9	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	10	-890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	426.040472695964	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTCTGCTTTATTCT	642	False	NA	15	True	NA	NA	NA	78915083	78921663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78915321_78918130_78918193_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.12	chr15	+	1756	8	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	22	-892	intron_retention	FALSE	canonical	0	0	junction_1	442.570229639619	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	654	False	NA	13	True	NA	NA	NA	78915095	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78915353_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ES.12242.13	chr15	+	2079	7	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	22	-892	intron_retention	FALSE	canonical	1	16	junction_4	486.977069959836	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	654	False	NA	13	True	NA	NA	NA	78915095	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919795_78919976_78920132_78920219_78920639_78920952
ES.12242.15	chr15	+	2615	7	NIC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	29	-892	intron_retention	FALSE	canonical	3	1189	junction_5	76.2605184001962	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	661	False	NA	13	True	NA	NA	NA	78915102	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78915321_78918130_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ES.12242.19	chr15	+	2696	6	NIC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	36	-892	intron_retention	FALSE	canonical	3	1189	junction_4	83.5377758861223	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	668	False	NA	13	True	NA	NA	NA	78915109	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78915321_78918130_78919262_78919456_78919604_78919976_78920303_78920466_78920639_78920952
ES.12242.2	chr15	+	1852	7	NIC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	-16	-890	intron_retention	FALSE	canonical	3	1189	junction_5	85.408820777872	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTCTGCTTTATTCT	616	False	NA	15	True	NA	NA	NA	78915057	78921663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920303_78920466_78920639_78920952
ES.12242.20	chr15	+	1369	9	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	48	-895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	431.895802682777	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACTTCAGTCTGCTTT	680	False	NA	10	True	NA	NA	NA	78915121	78921658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920074_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.3	chr15	+	2386	8	NIC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	-10	-892	intron_retention	FALSE	canonical	3	1189	junction_5	72.9987419516981	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	622	False	NA	13	True	NA	NA	NA	78915063	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78915321_78918130_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.4	chr15	+	1946	7	NIC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	-5	-890	intron_retention	FALSE	canonical	3	1189	junction_4	79.3251046152618	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTCTGCTTTATTCT	627	False	NA	15	True	NA	NA	NA	78915068	78921663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.5	chr15	+	1742	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	-5	633	-5	-633	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAATTGTTCCTAGA	627	False	NA	NA	False	GATAAA	-12	NA	78915068	78921920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12242.6	chr15	+	2681	4	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	3	893	3	-893	intron_retention	FALSE	canonical	3	1224	junction_3	82.7808351411525	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTCAGTCTGCTTTAT	635	False	NA	12	True	NA	NA	NA	78915076	78921660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456
ES.12242.7	chr15	+	2606	8	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5	27	5	-27	intron_retention	FALSE	canonical	3	1189	junction_6	79.2711698371289	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAACAATGCAAAA	637	False	NA	NA	False	NA	NA	NA	78915078	78922526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952
ES.12242.9	chr15	+	1412	9	NNC	ENSMUSG00000006378.16	novel	2370	9	NA	NA	6	-892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	421.598149901064	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCAGTCTGCTTTATT	638	False	NA	13	True	NA	NA	NA	78915079	78921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78915261_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ES.12243.1	chr15	-	358	1	Intergenic	novelGene_10236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAATGGCCAGGG	1059	False	NA	NA	False	NA	NA	NA	78928682	78928324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78928300_78928700
ES.12244.1	chr15	-	173	1	Intergenic	novelGene_10237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGGGGAAGAAGGCA	NA	False	NA	NA	False	NA	NA	NA	78933045	78932872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78932900_78933000
ES.12245.1	chr15	-	173	1	Intergenic	novelGene_10238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78933382	78933209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78933200_78933400
ES.12246.1	chr15	-	1899	8	NNC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	36.1967413123426	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTGTGTTTTTG	NA	False	NA	0	True	NA	NA	NA	78947087	78937293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946679
ES.12246.11	chr15	-	319	1	Intergenic	novelGene_10239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCCAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	78955816	78955497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78955500_78955800
ES.12246.12	chr15	-	181	1	Intergenic	novelGene_10240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78955818	78955637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78955600_78955800
ES.12246.2	chr15	-	2031	7	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	-43	-2	intron_retention	FALSE	canonical	3	102	junction_5	6.51707159867238	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTTTGTGTTTT	NA	False	NA	-2	True	NA	NA	NA	78947136	78937295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78938285_78938695_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ES.12246.3	chr15	-	1943	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	-42	3	-34	-3	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTTTTTGTGTTT	NA	False	NA	-3	True	NA	NA	NA	78947127	78937296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ES.12246.4	chr15	-	2359	6	FSM	ENSMUSG00000033055.13	ENSMUST00000229322.2	714	6	-233	-1412	-19	-4	multi-exon	FALSE	canonical	3	102	junction_4	6.88767014308903	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTGTTTTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	78947055	78937297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ES.12246.5	chr15	-	3069	5	NIC	ENSMUSG00000033055.13	novel	1034	8	NA	NA	1	4	intron_retention	FALSE	canonical	1	2	junction_3	48.442620697068	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTGTTGTTTTTTGTG	NA	False	NA	-6	True	NA	NA	NA	78947084	78937299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78946672
ES.12246.6	chr15	-	1809	9	NNC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	-10916	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.89210058895	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTGTTGTTTTTTG	NA	False	NA	-8	True	NA	NA	NA	78958009	78937301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78957316_78957554_78957920
ES.12246.7	chr15	-	2689	2	ISM	ENSMUSG00000033055.13	ENSMUST00000125523.2	502	3	-857	-666	-788	2	intron_retention	FALSE	canonical	3	115	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGTTGTTGTTTTTTG	NA	False	NA	-8	True	NA	NA	NA	78940401	78937301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_78938285_78938695
ES.12247.1	chr15	+	2282	13	NNC	ENSMUSG00000033047.6	novel	2345	6	NA	NA	-1074	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	506.901425876428	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	False	NA	30	True	AGTAAA	-20	NA	78958304	78978605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78958759_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.10	chr15	+	5105	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	502.541284926478	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959407	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974685_78974861_78977618_78978400
ES.12247.11	chr15	+	1889	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-32	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	506.901425876428	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCTGGGTTTGTGGTCT	NA	False	NA	21	True	AGTAAA	-11	NA	78959415	78978596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959486_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.12	chr15	+	2304	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	498.299692287015	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959416	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78978024_78978400
ES.12247.14	chr15	+	1874	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	508.535287751881	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959427	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966115_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.15	chr15	+	2899	12	NIC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	1651	junction_3	102.701927685965	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTTGTGGTCTCATTA	NA	False	NA	26	True	AGTAAA	-16	NA	78959428	78978601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78959493_78959970_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.18	chr15	+	1866	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	498.299692287015	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959430	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978418
ES.12247.19	chr15	+	1894	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_12	482.433148794271	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959438	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978382
ES.12247.2	chr15	+	1945	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	-3	0	-3	0	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	False	NA	30	True	AGTAAA	-20	NA	78959375	78978605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.20	chr15	+	1750	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493.395963085318	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959439	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961155_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.22	chr15	+	1848	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	508.789269573694	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959440	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963229_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.23	chr15	+	2596	12	NIC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	1651	junction_4	131.759297192624	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959440	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.24	chr15	+	5856	12	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	-7	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	512.070001025654	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTGTGGTCTCATT	NA	False	NA	25	True	AGTAAA	-15	NA	78959440	78978600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974685_78974861
ES.12247.26	chr15	+	1910	13	NIC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	15	-6	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	505.832482151947	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959472	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78959561_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.4	chr15	+	1433	12	NIC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	2	57	junction_10	508.172369403132	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959383	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78977536_78977618_78978400
ES.12247.7	chr15	+	1957	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493.395963085318	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959392	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78960995_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12247.9	chr15	+	1900	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	508.812581463505	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	False	NA	24	True	AGTAAA	-14	NA	78959407	78978599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966060_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ES.12248.1	chr15	-	956	1	Intergenic	novelGene_10241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTCCTCTGTATGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	78959368	78958412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78958400_78959400
ES.12249.1	chr15	-	159	2	Antisense	novelGene_ENSMUSG00000033047.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	78972093	78969042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_78969104_78971995
ES.12249.2	chr15	-	156	1	Intergenic	novelGene_10242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	78969198	78969042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78969000_78969200
ES.1225.1	chr1	-	3314	2	Antisense	novelGene_ENSMUSG00000026339.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTTTGGTTATGGTGT	502	False	NA	NA	False	NA	NA	NA	121359367	121355336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_121357959_121358675
ES.12250.1	chr15	-	145	1	Intergenic	novelGene_10243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAATTATATATA	NA	False	NA	NA	False	NA	NA	NA	78989812	78989667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_78989700_78989800
ES.12251.10	chr15	+	3136	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-34	3610	32	3	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTCCCAACCAGTT	5997	False	NA	NA	False	NA	NA	NA	78993129	79017490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.11	chr15	+	6740	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-30	2	-30	2	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCAGTGTGGGCCTTT	6001	False	NA	11	True	AATAAA	-20	NA	78993133	79021098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.12	chr15	+	6729	16	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-30	2	intron_retention	FALSE	canonical	0	0	junction_6	13.5127922930664	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCAGTGTGGGCCTTT	6001	False	NA	11	True	AATAAA	-20	NA	78993133	79021098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008711_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.13	chr15	+	6459	13	NIC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_1	14.2409815516893	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGTGTGGGCCTTTGT	6001	False	NA	13	True	AATAAA	-22	NA	78993133	79021100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_78993630_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.14	chr15	+	6804	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-26	2	intron_retention	FALSE	canonical	0	0	junction_1	15.3580953815895	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCAGTGTGGGCCTTT	6005	False	NA	11	True	AATAAA	-20	NA	78993137	79021098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78996339_78996408_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.16	chr15	+	3952	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-24	686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.4994212838921	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCACCTGTGTCCTGTC	6007	False	NA	NA	False	NA	NA	NA	78993139	79018370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.17	chr15	+	4040	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-23	1235	intron_retention	FALSE	non_canonical	0	0	junction_1	15.3580953815895	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGAAGGCAAAGACTTA	6008	False	NA	NA	False	NA	NA	NA	78993140	79018919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993170_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.18	chr15	+	4191	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	9	958	intron_retention	FALSE	non_canonical	0	0	junction_8	13.4994212838921	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGGTGCAGGAAATATT	6040	False	NA	NA	False	AATAGA	-16	NA	78993172	79018642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.19	chr15	+	3249	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	13	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.210887342624	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAACCAGTTGTGACT	6063	False	NA	NA	False	NA	NA	NA	78993195	79017496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003708_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.2	chr15	+	3174	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	-53	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.4994212838921	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAACCAGTTGTGACTT	5912	False	NA	NA	False	NA	NA	NA	78993044	79017497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.20	chr15	+	6128	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	61	0	intron_retention	FALSE	non_canonical	0	0	junction_5	14.8806449373003	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGTGTGGGCCTTTGT	6282	False	NA	13	True	AATAAA	-22	NA	78993414	79021100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79007025_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.3	chr15	+	3874	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	-65	2903	1	513	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTTGGTAGTCTCTCC	5966	False	NA	NA	False	NA	NA	NA	78993098	79018197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.4	chr15	+	6718	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_8	13.4994212838921	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCAGTGTGGGCCTTTGT	5971	False	NA	13	True	AATAAA	-22	NA	78993103	79021100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.5	chr15	+	2967	16	NNC	ENSMUSG00000033039.11	novel	6490	16	NA	NA	8	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.2659388472799	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACCAGTTGTGACTTA	5973	False	NA	NA	False	NA	NA	NA	78993105	79017498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79006988_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79014998_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.6	chr15	+	3500	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	19	211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.4994212838921	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCATCTCCTTTGCTCT	5984	False	NA	NA	False	NA	NA	NA	78993116	79017895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.7	chr15	+	3975	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	22	690	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	13.4994212838921	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTCCTGTCAACA	5987	False	NA	NA	False	NA	NA	NA	78993119	79018374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009688_79009742_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.8	chr15	+	4081	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	25	798	intron_retention	FALSE	non_canonical	0	0	junction_8	13.4994212838921	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACTTGTCCTGGGTTTT	5990	False	NA	NA	False	NA	NA	NA	78993122	79018482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12251.9	chr15	+	3030	17	NNC	ENSMUSG00000033039.11	novel	6712	16	NA	NA	31	213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.3580953815895	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATCTCCTTTGCTCTGT	5996	False	NA	NA	False	NA	NA	NA	78993128	79017897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_78993170_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009680_79009733_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ES.12252.1	chr15	+	616	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	273	-4	-69	4	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTACCTGCGTGCTGCCAC	NA	False	NA	32	True	AATAAA	-26	NA	79025481	79035978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ES.12252.10	chr15	+	705	6	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	998.120353464451	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCCTCTCCCCGTTAC	NA	False	NA	18	True	AATAAA	-12	NA	79025598	79035964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79025635_79028793_79028864_79028949_79029170_79030252_79030384_79035535_79035608_79035788
ES.12252.11	chr15	+	1205	6	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	40	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1010.70403185107	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCCCGTTACCTGCGTG	NA	False	NA	25	True	AATAAA	-19	NA	79025605	79035971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79025635_79026163_79026884_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ES.12252.12	chr15	+	2979	4	NNC	ENSMUSG00000033020.8	novel	509	2	NA	NA	-1834	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	952.475021544747	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTTACCTGCGTGC	1224	False	NA	26	True	AATAAA	-20	NA	79032172	79035972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79034585_79034803_79035115_79035535_79035608_79035788
ES.12252.13	chr15	+	2338	3	NNC	ENSMUSG00000033020.8	novel	509	2	NA	NA	-769	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1011.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCCCGTTACCTGCGTG	2289	False	NA	25	True	AATAAA	-19	NA	79033237	79035971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79034589_79034803_79035608_79035788
ES.12252.2	chr15	+	741	4	ISM	ENSMUSG00000033020.8	ENSMUST00000229973.2	414	5	-35	-177	-20	-3	intron_retention	FALSE	canonical	3	2040	junction_3	39.0640499692492	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCCCGTTACCTGCGTG	NA	False	NA	25	True	AATAAA	-19	NA	79025530	79035971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535
ES.12252.3	chr15	+	346	4	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	984.807595421562	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025530	79035974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79025635_79028793_79028864_79030252_79030355_79035904
ES.12252.4	chr15	+	625	5	FSM	ENSMUSG00000033020.8	ENSMUST00000229973.2	414	5	-35	-176	-20	-4	multi-exon	FALSE	canonical	3	17	junction_4	890.483962517012	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCCCGTTACCTGCGT	NA	False	NA	24	True	AATAAA	-18	NA	79025530	79035970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035674_79035788
ES.12252.5	chr15	+	555	5	NNC	ENSMUSG00000033020.8	novel	885	5	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	882.240613438307	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025533	79035974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79025635_79028793_79028868_79030261_79030384_79035535_79035608_79035788
ES.12252.6	chr15	+	498	5	FSM	ENSMUSG00000033020.8	ENSMUST00000040077.8	452	5	-8	-38	-8	2	multi-exon	FALSE	canonical	3	17	junction_3	888.21224940889	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCTCTCCCCGTTACCT	NA	False	NA	20	True	AATAAA	-14	NA	79025542	79035966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79025635_79028793_79028864_79030252_79030339_79035535_79035608_79035788
ES.12252.7	chr15	+	2677	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	335	-2127	-7	2127	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCGTGTGGTCCGAT	NA	False	NA	NA	False	AATAAA	-19	NA	79025543	79038101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ES.12253.1	chr15	-	176	2	Antisense	novelGene_ENSMUSG00000033020.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	2895	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1579	False	NA	NA	False	NA	NA	NA	79027570	79027205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79027333_79027521
ES.12253.2	chr15	-	178	1	Intergenic	novelGene_10244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGGCTGGTG	1577	False	NA	NA	False	NA	NA	NA	79027572	79027394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79027400_79027600
ES.12254.1	chr15	-	177	1	Intergenic	novelGene_10245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	79073249	79073072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79073100_79073200
ES.12255.1	chr15	+	2610	4	NNC	ENSMUSG00000075555.13	novel	905	4	NA	NA	-56	1327	intron_retention	FALSE	non_canonical	0	0	junction_3	1.69967317119759	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTTAATCATTCTTGG	3836	False	NA	NA	False	NA	NA	NA	79093454	79102910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79093614_79094390_79094450_79100309_79102603_79102811
ES.12255.2	chr15	+	2700	2	NNC	ENSMUSG00000075555.13	novel	905	4	NA	NA	6466	1272	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	79099976	79102855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79102603_79102781
ES.12255.3	chr15	+	2656	1	NIC	ENSMUSG00000075555.13	novel	435	4	NA	NA	6744	1327	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTTAATCATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	79100254	79102910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79100300_79102900
ES.12256.1	chr15	+	1978	1	Intergenic	novelGene_10246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTCTTTCCTTCCTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	79104430	79106408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79104400_79106400
ES.12257.1	chr15	+	3609	12	NIC	ENSMUSG00000068206.14	novel	2054	13	NA	NA	-61	-2	intron_retention	FALSE	canonical	3	17	junction_1	65.1052548944863	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4113	False	NA	16	True	AATAAA	-16	NA	79113311	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.10	chr15	+	4415	10	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	7	-2	intron_retention	FALSE	canonical	1	3	junction_6	72.7498674217111	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4390	False	NA	16	True	AATAAA	-16	NA	79113588	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79127258_79129054_79129109_79130177_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.11	chr15	+	3228	11	ISM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	7	2	7	-2	intron_retention	FALSE	canonical	3	173	junction_9	27.9114671774882	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4390	False	NA	16	True	AATAAA	-16	NA	79113588	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464
ES.12257.12	chr15	+	1611	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	11	355	11	-218	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCCCTGCTCCTC	4394	False	NA	NA	False	CATAAA	-18	NA	79113592	79133311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.13	chr15	+	2688	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	11	-2	intron_retention	FALSE	canonical	1	1	junction_2	71.9333719493254	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4394	False	NA	16	True	AATAAA	-16	NA	79113592	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.14	chr15	+	2583	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	13	-6	intron_retention	FALSE	canonical	3	173	junction_8	27.3523081353398	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGCATGGGCTCCTT	4396	False	NA	12	True	AATAAA	-12	NA	79113594	79133660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.15	chr15	+	4473	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	14	0	intron_retention	FALSE	canonical	3	173	junction_8	27.9778483804599	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4397	False	NA	18	True	AATAAA	-18	NA	79113595	79133666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.16	chr15	+	1619	11	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.9043894426118	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGTGTTCGTGTTTCT	4398	False	NA	NA	False	NA	NA	NA	79113596	79132160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113674_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464
ES.12257.17	chr15	+	2129	13	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	66.8393596618041	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGGCTCCTTGCA	4410	False	NA	15	True	AATAAA	-15	NA	79113608	79133663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132738
ES.12257.18	chr15	+	3618	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	173	junction_8	27.3378011533632	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGCATGGGCTCCTT	4410	False	NA	12	True	AATAAA	-12	NA	79113608	79133660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.19	chr15	+	3651	13	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.7444857222784	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4410	False	NA	17	True	AATAAA	-17	NA	79113608	79133665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79128208_79128297_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132925
ES.12257.2	chr15	+	3364	12	NNC	ENSMUSG00000068206.14	novel	2054	13	NA	NA	-31	-2	intron_retention	FALSE	canonical	0	0	junction_4	87.9734182241976	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4143	False	NA	16	True	AATAAA	-16	NA	79113341	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79124752_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.20	chr15	+	2717	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	3	junction_7	69.5966234813155	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGCATGGGCTCCTT	4410	False	NA	12	True	AATAAA	-12	NA	79113608	79133660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79130177_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.21	chr15	+	4216	9	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	173	junction_7	27.7037903543901	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4410	False	NA	18	True	AATAAA	-18	NA	79113608	79133666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79130312_79130607_79130701_79131464
ES.12257.22	chr15	+	2999	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	173	junction_8	28.6537955600999	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4410	False	NA	18	True	AATAAA	-18	NA	79113608	79133666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79131516_79132351
ES.12257.23	chr15	+	3405	11	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	0	-4	intron_retention	FALSE	canonical	3	173	junction_8	27.9730227183263	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCATGGGCTCCTTGC	4412	False	NA	14	True	AATAAA	-14	NA	79113610	79133662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.24	chr15	+	2772	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	173	junction_9	26.6780623034069	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4422	False	NA	16	True	AATAAA	-16	NA	79113620	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.26	chr15	+	1908	12	FSM	ENSMUSG00000068206.14	ENSMUST00000166155.2	1699	12	-74	-135	-74	-2	multi-exon	FALSE	canonical	3	173	junction_8	27.1253594255807	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4629	False	NA	16	True	AATAAA	-16	NA	79113827	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.27	chr15	+	3253	5	ISM	ENSMUSG00000068206.14	ENSMUST00000169548.8	2325	10	13560	-1503	8	0	3prime_fragment	FALSE	canonical	3	173	junction_3	37.0607609204128	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	2149	False	NA	18	True	AATAAA	-18	NA	79127175	79133666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464
ES.12257.28	chr15	+	5773	2	NNC	ENSMUSG00000068206.14	novel	1944	3	NA	NA	634	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	2775	False	NA	16	True	AATAAA	-16	NA	79127801	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79128208_79128297
ES.12257.3	chr15	+	3522	11	NIC	ENSMUSG00000068206.14	novel	2054	13	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	17	junction_1	68.3959794139977	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4147	False	NA	16	True	AATAAA	-16	NA	79113345	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.30	chr15	+	2967	4	NIC	ENSMUSG00000068206.14	novel	1699	12	NA	NA	135	-4	intron_retention	FALSE	canonical	3	173	junction_1	37.151342132179	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCATGGGCTCCTTGC	4185	False	NA	14	True	AATAAA	-14	NA	79129211	79133662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79130312_79130607_79130701_79131464_79132497_79132920
ES.12257.4	chr15	+	2041	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	-7	20	-7	-2	multi-exon	FALSE	canonical	3	17	junction_1	62.6245425798331	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4167	False	NA	16	True	AATAAA	-16	NA	79113365	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.5	chr15	+	2081	13	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	66.8393596618041	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAATGCATGGGCTCC	4378	False	NA	10	True	AATAAA	-10	NA	79113576	79133658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132813
ES.12257.7	chr15	+	1975	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	1	1	1	-1	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGCTCCTTGCAAT	4384	False	NA	17	True	AATAAA	-17	NA	79113582	79133665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.8	chr15	+	1866	12	NIC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	69.1077730615063	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4388	False	NA	16	True	AATAAA	-16	NA	79113586	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79113771_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ES.12257.9	chr15	+	2196	12	NNC	ENSMUSG00000068206.14	novel	2054	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	14	junction_11	82.2082620367773	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGGCTCCTTGCAA	4388	False	NA	16	True	AATAAA	-16	NA	79113586	79133664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132925
ES.12258.1	chr15	-	1113	6	ISM	ENSMUSG00000018126.16	ENSMUST00000169462.8	2276	13	23942	32	-203	-32	3prime_fragment	FALSE	canonical	1	1	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	79145700	79142427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79142853_79143003_79143048_79143387_79143596_79143851_79143975_79145273_79145488_79145601
ES.12259.1	chr15	+	204	1	Intergenic	novelGene_10247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGGAGTTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	79159141	79159345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79159100_79159300
ES.1226.1	chr1	-	5100	1	Antisense	novelGene_ENSMUSG00000026339.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCTGGGACCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	121371746	121366646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_121366600_121371700
ES.1226.2	chr1	-	4204	2	Antisense	novelGene_ENSMUSG00000026339.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCTGGGACCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	121370990	121366646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_121369666_121369805
ES.1226.3	chr1	-	4738	1	Antisense	novelGene_ENSMUSG00000026339.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGGAGAGCAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	121375803	121371065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_121371100_121375800
ES.12260.10	chr15	-	4449	16	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.4655839031792	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212439	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181649_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ES.12260.11	chr15	-	2978	16	NNC	ENSMUSG00000042632.18	novel	3365	16	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	62.6555309254942	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212356	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212201
ES.12260.12	chr15	-	3117	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	53.1124617556935	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212417	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ES.12260.13	chr15	-	3217	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	73.905532145171	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212417	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191129_79191230_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ES.12260.14	chr15	-	4275	16	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	79	junction_15	38.9931048035704	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212463	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ES.12260.16	chr15	-	3541	17	NNC	ENSMUSG00000042632.18	novel	3018	17	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_15	72.4307589615765	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212389	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79203254_79203418_79211834
ES.12260.17	chr15	-	4697	16	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	66	0	intron_retention	FALSE	canonical	3	78	junction_15	39.152692542574	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212310	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.18	chr15	-	3317	16	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	30	0	intron_retention	FALSE	canonical	2	2	junction_10	58.5766734004814	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212346	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.20	chr15	-	2867	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	51.8533830461748	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212453	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ES.12260.21	chr15	-	3097	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	55.3629733985577	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212352	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211882_79212288
ES.12260.22	chr15	-	2943	17	FSM	ENSMUSG00000042632.18	ENSMUST00000172403.9	2943	17	2	-2	2	-2	multi-exon	FALSE	canonical	3	11	junction_16	62.696565894792	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212451	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ES.12260.25	chr15	-	3182	18	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	55.3629733985577	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212404	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
ES.12260.26	chr15	-	2848	16	NIC	ENSMUSG00000042632.18	novel	2943	17	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	66.5837484342505	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212430	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ES.12260.27	chr15	-	3478	17	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	38	-2	intron_retention	FALSE	canonical	0	0	junction_14	57.0645194056692	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212338	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196166_79197147_79197364_79201960_79202211_79211834
ES.12260.3	chr15	-	3495	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	2	9	intron_retention	FALSE	canonical	0	0	junction_8	75.4092869190076	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGTGCCATTGTGTG	NA	False	NA	-1	True	AATAAA	-25	NA	79212374	79170418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79187773_79187803_79188504_79188599_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.30	chr15	-	3690	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	39	-2	intron_retention	FALSE	canonical	0	0	junction_8	66.6042903114302	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212337	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79187601_79187803_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.31	chr15	-	2458	5	ISM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	36991	2	-2736	-2	3prime_fragment	FALSE	canonical	3	155	junction_4	33.8332307059199	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79175173	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778
ES.12260.32	chr15	-	4266	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_5	74.7386681183892	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTGTACAGTGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	79212391	79170429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79174416_79175270_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188540_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.34	chr15	-	3028	17	FSM	ENSMUSG00000042632.18	ENSMUST00000173163.8	3018	17	-14	4	11	0	multi-exon	FALSE	canonical	0	0	junction_16	64.3206991857987	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCATTGTACAGTGT	NA	False	NA	-14	True	AATAAA	-12	NA	79212417	79170431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
ES.12260.36	chr15	-	3406	17	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	-10	0	intron_retention	FALSE	canonical	1	3	junction_9	55.7729423085245	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCATTGTACAGTGT	NA	False	NA	-14	True	AATAAA	-12	NA	79212386	79170431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188540_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ES.12260.37	chr15	-	2211	12	NNC	ENSMUSG00000042632.18	novel	834	5	NA	NA	-13	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.0772027340687	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGTGGTGGCTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	79212389	79187269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79187803_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79203819_79203925_79211834_79211915_79212288
ES.12260.38	chr15	-	1678	9	ISM	ENSMUSG00000042632.18	ENSMUST00000172403.9	2943	17	10	19134	10	305	5prime_fragment	FALSE	canonical	3	11	junction_8	55.7673739743947	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCGTCTACTATGCTTG	NA	False	NA	NA	False	NA	NA	NA	79212443	79189565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ES.12260.39	chr15	-	2111	2	ISM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	-2	30216	-2	1427	5prime_fragment	FALSE	canonical	3	78	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATCTTTGTATGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	79212378	79200643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79202211_79211834
ES.12260.4	chr15	-	3035	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	12	9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	58.7765564978929	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGTGCCATTGTGTG	NA	False	NA	-1	True	AATAAA	-25	NA	79212441	79170418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ES.12260.40	chr15	-	205	1	Intergenic	novelGene_10248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAAGGTGTG	NA	False	NA	-1	True	NA	NA	NA	79211040	79210835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79210800_79211000
ES.12260.5	chr15	-	3003	16	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	60.1164055996549	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTACAGTGTGTGCCA	NA	False	NA	-8	True	AATAAA	-18	NA	79212375	79170425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ES.12260.7	chr15	-	3156	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212577	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ES.12260.8	chr15	-	3107	18	NNC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	71.6487008408382	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212451	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192866_79193057_79195993_79196178_79197147_79197364_79201960_79202206_79211834_79211915_79212409
ES.12260.9	chr15	-	2986	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	-23	0	2	0	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212451	79170427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ES.12261.1	chr15	-	207	1	Intergenic	novelGene_10249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGTTCAACCGAAGCT	NA	False	NA	NA	False	AAAAAG	-4	NA	79214270	79214063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79214100_79214300
ES.12262.1	chr15	+	2021	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	-64	1	-64	-1	multi-exon	FALSE	canonical	3	18	junction_1	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGTATGTCTTGGA	2201	False	NA	21	True	AATAAA	-22	NA	79231655	79243275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79231955_79241166_79241234_79241620
ES.12262.2	chr15	+	2029	3	FSM	ENSMUSG00000042622.15	ENSMUST00000163691.3	1902	3	-125	-2	-125	2	multi-exon	FALSE	canonical	3	16	junction_1	8	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGTGTATGTCTTGG	2684	False	NA	20	True	AATAAA	-21	NA	79232138	79243274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79232447_79241166_79241234_79241620
ES.12262.3	chr15	+	2139	4	NNC	ENSMUSG00000042622.15	novel	1902	3	NA	NA	-38	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.084944665313	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAGTGTATGTCTTGG	2771	False	NA	20	True	AATAAA	-21	NA	79232225	79243274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79232447_79238391_79238589_79241166_79241234_79241620
ES.12262.4	chr15	+	1767	3	NNC	ENSMUSG00000042622.15	novel	1873	3	NA	NA	3405	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGTATGTCTTGGACT	6552	False	NA	23	True	AATAAA	-24	NA	79236006	79243277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79236050_79241166_79241234_79241620
ES.12263.1	chr15	-	922	1	Antisense	novelGene_ENSMUSG00000042622.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGGCTTCTATCTCA	NA	False	NA	-1	True	AGTAAA	-20	NA	79242004	79241082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79241100_79242000
ES.12264.1	chr15	-	5148	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	246	-1767	-47	1767	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAGATTAAATGTGA	NA	False	NA	NA	False	TTTAAA	-34	NA	79287523	79243116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.10	chr15	-	2918	7	NIC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	122.684441646943	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287476	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79287384
ES.12264.11	chr15	-	3402	10	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	135.737309844975	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287493	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79258333_79258385_79261246_79261413_79262663_79262914_79287384
ES.12264.12	chr15	-	3522	10	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	138.576983106552	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287480	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79286319_79286504_79287384
ES.12264.14	chr15	-	4075	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.468321250936	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287475	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79260504_79261413_79262663_79262914_79287384
ES.12264.15	chr15	-	3185	7	NIC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	119.452919595965	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287494	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79261246_79261413_79262663_79262914_79287384
ES.12264.16	chr15	-	3187	8	NIC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	151.58294018491	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287475	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79261246_79261413_79262663_79262914_79287384
ES.12264.17	chr15	-	3455	10	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	135.132125558746	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287482	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261041_79261157_79261246_79261413_79262663_79262914_79287384
ES.12264.19	chr15	-	3738	13	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	160.257778455698	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTGCCAGCGAGGT	NA	False	NA	-4	True	AATATA	-33	NA	79287501	79244884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79256546_79256639_79257173_79257296_79258333_79258385_79261041_79261157_79261246_79261413_79262663_79262914_79287384
ES.12264.2	chr15	-	4756	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	256	-1385	-37	1385	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACTTATGTGAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	79287513	79243498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.20	chr15	-	3282	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	109.625997714958	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTGCCAGCGAGGT	NA	False	NA	-4	True	AATATA	-33	NA	79287476	79244884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250106_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.21	chr15	-	3342	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.306727110269	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCCTGCCAGCGAGG	NA	False	NA	-5	True	AATATA	-32	NA	79287475	79244885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249473_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.24	chr15	-	2850	11	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.477991403535	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTGCCTGCCAGCGA	NA	False	NA	-7	True	AATATA	-30	NA	79287500	79244887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79245492_79246016_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.25	chr15	-	5708	8	NIC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	1	-4	intron_retention	FALSE	canonical	3	271	junction_7	27.9511235216484	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATAGATTGTATTGAAA	NA	False	NA	-27	True	AATAAA	-26	NA	79287475	79244907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.26	chr15	-	3524	10	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	133.82142145227	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATAGATTGTATTGAA	NA	False	NA	-28	True	AATAAA	-25	NA	79287466	79244908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262312_79262538_79262663_79262914_79287384
ES.12264.27	chr15	-	3167	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-27	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.046161572564	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGATAATATAGATTG	NA	False	NA	-35	True	AATAAA	-18	NA	79287503	79244915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249525_79249993_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.28	chr15	-	4111	9	NIC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	-16	-12	intron_retention	FALSE	canonical	3	26	junction_1	102.968441767369	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGATAATATAGATTG	NA	False	NA	-35	True	AATAAA	-18	NA	79287492	79244915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.29	chr15	-	3514	11	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	-1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.654802796302	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGAGATAATATAGA	NA	False	NA	-38	True	AATAAA	-15	NA	79287477	79244918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79256546_79256639_79257173_79257296_79261246_79261413_79262663_79262914_79287384
ES.12264.3	chr15	-	4617	10	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	0	1385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.944547379515	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACTTATGTGAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	79287476	79243498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79246184_79246285_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.30	chr15	-	3421	9	NIC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-33	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	111.157545852722	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATGAGATAATATAGA	4420	False	NA	-38	True	AATAAA	-15	NA	79281089	79244918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79280875
ES.12264.31	chr15	-	3291	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	1	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	109.422061303925	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATGAGATAATATAG	NA	False	NA	-39	True	AATAAA	-14	NA	79287475	79244919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253940_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.32	chr15	-	3244	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	2176	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	111.157545852722	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATGAGATAATATAG	566	False	NA	-39	True	AATAAA	-14	NA	79284943	79244919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79284905
ES.12264.33	chr15	-	3284	9	NNC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-14	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	107.623112643149	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATGAGATAATAT	NA	False	NA	-41	True	AATAAA	-12	NA	79287490	79244921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261387_79262663_79262914_79287384
ES.12264.34	chr15	-	3354	10	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	4	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	135.338350572934	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATATATATATGAGAT	NA	False	NA	-46	True	AATAAA	-7	NA	79287452	79244926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261041_79261129_79261246_79261413_79262663_79262914_79287384
ES.12264.36	chr15	-	3195	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	269	163	-24	-143	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCCCCCTAGTTTTGT	NA	False	NA	NA	False	CATAAA	-35	NA	79287500	79245046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.37	chr15	-	3205	5	ISM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	-44	6460	-24	1925	5prime_fragment	FALSE	canonical	3	271	junction_4	32.8747623565555	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGATGATGGAGGTCC	NA	False	NA	NA	False	NA	NA	NA	79287500	79251363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.38	chr15	-	166	1	Intergenic	novelGene_10250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAAAATAGGAG	2348	False	NA	NA	False	NA	NA	NA	79263439	79263273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79263300_79263400
ES.12264.39	chr15	-	1315	1	NIC	ENSMUSG00000009035.16	novel	3627	9	NA	NA	-4	-23443	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAGAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	79287480	79286165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79286200_79287500
ES.12264.4	chr15	-	4810	10	NNC	ENSMUSG00000009035.16	novel	3315	10	NA	NA	1	1377	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	136.753630867906	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCAGACTTATGT	NA	False	NA	NA	False	NA	NA	NA	79287455	79243506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79260431_79260552_79261246_79261413_79262663_79262914_79287384
ES.12264.5	chr15	-	4225	7	ISM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	33267	-1397	4	1377	3prime_fragment	FALSE	canonical	3	23	junction_1	146.636739370914	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCAGACTTATGT	7104	False	NA	NA	False	NA	NA	NA	79254189	79243506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097
ES.12264.7	chr15	-	3645	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	-17	-1	-17	1	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGCCAGCGAGGTTT	NA	False	NA	-2	True	AATATA	-35	NA	79287786	79244882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12264.9	chr15	-	3391	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	-56	-20	-36	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287512	79244883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ES.12265.1	chr15	-	6105	1	Genic_Genomic	ENSMUSG00000022433.22	novel	NA	NA	NA	NA	-788	1857	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79306303	79300198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_79300200_79306300
ES.12265.11	chr15	-	2652	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCCTCTGTCTGCCTCTT	8039	False	NA	-3	True	AATAAA	-25	NA	79326317	79302054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
ES.12265.12	chr15	-	2717	11	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-106	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.903013836398	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCCTCTGTCTGCCTCTT	4907	False	NA	-3	True	AATAAA	-25	NA	79323324	79302054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79323230
ES.12265.13	chr15	-	5574	10	ISM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	194	-1	12	1	3prime_fragment	FALSE	canonical	3	402	junction_1	63.5343787563128	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCCTCTGTCTGCCTCTT	8350	False	NA	-3	True	AATAAA	-25	NA	79326006	79302054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971
ES.12265.14	chr15	-	4381	11	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	164.785587962054	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCCTCTGTCTGCCTC	8318	False	NA	-5	True	AATAAA	-23	NA	79326038	79302056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79324282
ES.12265.15	chr15	-	2470	10	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	176.454869549283	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCCTCTGTCTGCCTC	8075	False	NA	-5	True	AATAAA	-23	NA	79326281	79302056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303143_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.16	chr15	-	2457	11	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	209.704935564235	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCCTCTGTCTGCCTC	8425	False	NA	-5	True	AATAAA	-23	NA	79339771	79302056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303143_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79339690
ES.12265.17	chr15	-	2672	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	165.903013836398	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCCTCTGTCTGCCTC	8349	False	NA	-5	True	AATAAA	-23	NA	79326007	79302056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79325960
ES.12265.18	chr15	-	2806	12	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	228.710795764375	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATACCCTCTGTCTGCCT	8104	False	NA	-6	True	AATAAA	-22	NA	79326252	79302057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79305916_79305978_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
ES.12265.19	chr15	-	3212	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	165.903013836398	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATACCCTCTGTCTGCC	8347	False	NA	-7	True	AATAAA	-21	NA	79326009	79302058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79325420
ES.12265.2	chr15	-	5261	10	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	16	1857	intron_retention	TRUE	canonical	3	37	junction_9	162.413737787855	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	8445	False	NA	NA	False	NA	NA	NA	79339751	79300198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12265.20	chr15	-	3257	10	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	21	-4	intron_retention	FALSE	canonical	2	2	junction_9	172.385084285012	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATACCCTCTGTCTGC	8040	False	NA	-8	True	AATAAA	-20	NA	79326316	79302059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326292
ES.12265.21	chr15	-	5905	11	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	49	-5	intron_retention	FALSE	canonical	2	8	junction_4	168.3633273608	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8068	False	NA	-9	True	AATAAA	-19	NA	79326288	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79305916_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.22	chr15	-	1600	11	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.789899581807	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8083	False	NA	-9	True	AATAAA	-19	NA	79326273	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79302221_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.25	chr15	-	2527	11	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	59	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	167.909618545216	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8078	False	NA	-9	True	AATAAA	-19	NA	79326278	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303143_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.26	chr15	-	3304	10	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	9	-5	intron_retention	FALSE	canonical	3	37	junction_9	162.198095618359	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8438	False	NA	-9	True	AATAAA	-19	NA	79339758	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12265.27	chr15	-	2220	8	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	132	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	177.668804469532	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	9407	False	NA	-9	True	AATAAA	-19	NA	79313935	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309794_79310458_79310688_79313911
ES.12265.28	chr15	-	3371	10	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	-59	-5	intron_retention	FALSE	canonical	3	332	junction_9	84.8241463409396	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8094	False	NA	-9	True	AATAAA	-19	NA	79326262	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.29	chr15	-	2148	8	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	47	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	180.691528776057	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8066	False	NA	-9	True	AATAAA	-19	NA	79326290	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309121_79314273_79314366_79322971_79323060_79326127
ES.12265.30	chr15	-	2276	8	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	60	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	185.193996464601	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	9335	False	NA	-9	True	AATAAA	-19	NA	79314007	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304876_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911
ES.12265.31	chr15	-	2763	12	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	231.665689595022	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATACCCTCTGTCTG	8425	False	NA	-9	True	AATAAA	-19	NA	79339771	79302060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79305916_79305978_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12265.33	chr15	-	2423	10	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-56	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.73632449234	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATAGATACCCTCTGTCT	8097	False	NA	-10	True	AATAAA	-18	NA	79326259	79302061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303123_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.34	chr15	-	6429	10	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	19	-7	intron_retention	FALSE	canonical	0	0	junction_5	212.045068584749	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATAGATACCCTCTGTC	8448	False	NA	-11	True	AATAAA	-17	NA	79339748	79302062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79309189_79309699_79309794_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12265.35	chr15	-	4237	11	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	18	-107	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	164.785587962054	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGGGAATTTTGTACT	8356	False	NA	-111	True	TTTAAA	-28	NA	79326000	79302162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79324282
ES.12265.36	chr15	-	2672	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-89	-1191	45	-119	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAAGAACTTTGGGGG	8064	False	NA	-123	True	TTTAAA	-16	NA	79326292	79302174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.37	chr15	-	3403	7	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-70	3314	64	1	5prime_fragment	FALSE	canonical	3	332	junction_6	88.6561710580074	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGCGTTTCTTAAGG	8083	False	NA	1	True	AATAAA	-16	NA	79326273	79306679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.39	chr15	-	2736	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGCGTTTCTTAAG	8069	False	NA	0	True	AATAAA	-15	NA	79326287	79306680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.4	chr15	-	2845	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-140	-1313	-6	3	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGTCTGCCTCTTTG	8013	False	NA	-1	True	AATAAA	-27	NA	79326343	79302052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.42	chr15	-	1574	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGTGTACCTCTCTTT	8068	False	NA	-1	True	ATTAAA	-18	NA	79326288	79307843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.43	chr15	-	1438	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	248.845302095499	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGTGTACCTCTCTTT	8039	False	NA	-1	True	ATTAAA	-18	NA	79326317	79307843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
ES.12265.44	chr15	-	1810	9	FSM	ENSMUSG00000022433.22	ENSMUST00000122044.8	3174	9	201	1163	201	0	multi-exon	FALSE	canonical	0	0	junction_8	252.865051707428	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGTGTACCTCTCTTT	8539	False	NA	-1	True	ATTAAA	-18	NA	79325817	79307843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79325420
ES.12265.5	chr15	-	5406	11	NNC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	165.623549050248	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGTCTGCCTCTTTG	8349	False	NA	-1	True	AATAAA	-27	NA	79326007	79302052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79323230
ES.12265.6	chr15	-	2702	11	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8432	False	NA	-2	True	AATAAA	-26	NA	79339764	79302053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12265.7	chr15	-	2819	10	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	-25	2	intron_retention	FALSE	canonical	3	59	junction_9	154.18659530854	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8128	False	NA	-2	True	AATAAA	-26	NA	79326228	79302053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
ES.12265.8	chr15	-	6646	10	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	21	2	intron_retention	FALSE	canonical	3	332	junction_9	83.0975924834361	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8040	False	NA	-2	True	AATAAA	-26	NA	79326316	79302053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ES.12265.9	chr15	-	6506	10	NIC	ENSMUSG00000022433.22	novel	1392	11	NA	NA	28	2	intron_retention	FALSE	canonical	3	37	junction_9	163.610950763928	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGTCTGCCTCTTT	8457	False	NA	-2	True	AATAAA	-26	NA	79339739	79302053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
ES.12266.1	chr15	+	169	1	Intergenic	novelGene_10251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATTGGAATA	252	False	NA	NA	False	NA	NA	NA	79347889	79348058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79347900_79348100
ES.12267.1	chr15	-	320	1	Intergenic	novelGene_10252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGGGTGGGAAAGACA	7258	False	NA	NA	False	NA	NA	NA	79350536	79350216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79350200_79350500
ES.12268.1	chr15	-	168	1	Intergenic	novelGene_10253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTTTGGGGGGGGGT	NA	False	NA	NA	False	NA	NA	NA	79360509	79360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79360300_79360500
ES.12269.1	chr15	-	1400	1	ISM	ENSMUSG00000044216.8	ENSMUST00000057801.8	2152	2	20124	4	20124	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTAGGCTGGTAGAGAG	9303	False	NA	NA	False	AATAAA	-15	NA	79369318	79367918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79367900_79369300
ES.1227.1	chr1	+	170	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	121481021	121481191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_121481000_121481200
ES.12270.1	chr15	+	5148	2	Antisense	novelGene_ENSMUSG00000044216.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAGTAAATCTT	NA	False	NA	NA	False	NA	NA	NA	79371318	79377268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_79371539_79372340
ES.12271.1	chr15	+	1508	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	-96	-1	-96	1	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGTATTTATTTATAC	NA	False	NA	12	True	AATAAA	-17	NA	79400515	79411941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ES.12271.2	chr15	+	1117	4	NIC	ENSMUSG00000010830.9	novel	1411	5	NA	NA	40	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.237297993102	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAAGTATTTATTTAT	NA	False	NA	10	True	AATAAA	-15	NA	79400651	79411939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79400842_79407011_79407113_79409004_79409164_79411272
ES.12271.3	chr15	+	1164	3	ISM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	8308	1	8308	-1	3prime_fragment	FALSE	canonical	3	201	junction_1	20	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAAGTATTTATTTAT	NA	False	NA	10	True	AATAAA	-15	NA	79408919	79411939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79409164_79409867_79410121_79411272
ES.12272.1	chr15	+	3914	11	Antisense	novelGene_ENSMUSG00000055065.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGCGGCCGCGGAGACC	2921	False	NA	NA	False	NA	NA	NA	79417765	79430756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423178_79423517_79423662_79424613_79424680_79425234_79425371_79426689_79426790_79427907_79428056_79430393
ES.12273.1	chr15	-	3498	1	Antisense	novelGene_ENSMUSG00000010830.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGAAGAATGCTGGCT	5624	False	NA	NA	False	NA	NA	NA	79409111	79405613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79405600_79409100
ES.12274.1	chr15	-	10644	7	NIC	ENSMUSG00000055065.8	novel	2821	11	NA	NA	1	34	intron_retention	FALSE	canonical	0	0	junction_5	30.5309496886174	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTAAGTGTACTCTTAA	NA	False	NA	-6	True	AATAAA	-35	NA	79430759	79411902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79420218_79421197_79421260_79421635_79423180_79423519_79423662_79424613_79424680_79427906_79428058_79430395
ES.12274.10	chr15	-	2093	8	ISM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	7280	1636	7094	-1636	3prime_fragment	FALSE	canonical	3	60	junction_1	12.4981631303425	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGTTCAAGCGTTG	6194	False	NA	-12	True	ATTAAA	-34	NA	79423662	79413572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519
ES.12274.11	chr15	-	2523	12	ISM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	2909	1638	2723	-1638	3prime_fragment	FALSE	canonical	3	53	junction_1	13.3106556457226	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGAGTTCAAGCGT	1823	False	NA	-14	True	ATTAAA	-32	NA	79428033	79413574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906
ES.12274.12	chr15	-	2503	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	183	2046	1	1571	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGAATTAATTTCTTT	NA	False	NA	NA	False	AATATA	-17	NA	79430759	79413982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ES.12274.13	chr15	-	1943	11	NIC	ENSMUSG00000055065.8	novel	4726	13	NA	NA	2753	1569	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	25.5556256037687	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAAAGAATTAATTTCT	1853	False	NA	NA	False	AATATA	-15	NA	79428003	79413984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79426687_79426788_79427906
ES.12274.14	chr15	-	6172	11	NIC	ENSMUSG00000055065.8	novel	4726	13	NA	NA	2698	1567	intron_retention	FALSE	canonical	3	57	junction_8	13.0858702423645	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGGAAAGAATTAATTT	1798	False	NA	NA	False	AATATA	-13	NA	79428058	79413986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79414719_79415878_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906
ES.12274.15	chr15	-	1989	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	504	2233	318	1384	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAACACTGTCTTTTAC	NA	False	NA	NA	False	AATGAA	-43	NA	79430438	79414169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ES.12274.16	chr15	-	1298	2	ISM	ENSMUSG00000055065.8	ENSMUST00000229431.2	2821	11	19	8244	15	-8244	5prime_fragment	FALSE	canonical	3	55	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTACTTACCCAGAA	NA	False	NA	NA	False	NA	NA	NA	79430741	79427105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79428058_79430395
ES.12274.17	chr15	-	3853	1	Genic_Genomic	ENSMUSG00000055065.8	novel	NA	NA	NA	NA	-16	-8244	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTACTTACCCAGAA	NA	False	NA	NA	False	NA	NA	NA	79430958	79427105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_79427100_79431000
ES.12274.2	chr15	-	4754	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	12	-34	12	34	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTAAGTGTACTCTTAA	NA	False	NA	-6	True	AATAAA	-35	NA	79430930	79411902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ES.12274.3	chr15	-	4770	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	-10	-34	-10	34	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTAAGTGTACTCTTAA	NA	False	NA	-6	True	AATAAA	-35	NA	79430952	79411902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ES.12274.5	chr15	-	5904	2	ISM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	11942	0	11756	0	3prime_fragment	FALSE	canonical	3	60	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79419000	79411936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79414719_79415878
ES.12274.7	chr15	-	7631	6	NIC	ENSMUSG00000055065.8	novel	4732	13	NA	NA	7577	-3	intron_retention	FALSE	canonical	3	53	junction_1	16.2160414404996	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGTGAATTTTTTATT	6677	False	NA	-43	True	AATAAA	-12	NA	79423179	79411939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79414719_79415872_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018
ES.12274.9	chr15	-	1376	2	NNC	ENSMUSG00000055065.8	novel	4732	13	NA	NA	17254	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGTGTGAATTTTTT	1233	False	NA	-46	True	AATAAA	-9	NA	79413502	79411942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79413202_79413385
ES.12275.1	chr15	+	158	1	Intergenic	novelGene_10254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4273	False	NA	NA	False	NA	NA	NA	79433256	79433414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79433300_79433400
ES.12276.1	chr15	-	138	1	Intergenic	novelGene_10255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAAACAA	3195	False	NA	NA	False	NA	NA	NA	79438922	79438784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79438800_79438900
ES.12277.1	chr15	+	163	1	Intergenic	novelGene_10257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	79480196	79480359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79480200_79480400
ES.12277.2	chr15	+	177	2	Antisense	novelGene_ENSMUSG00000042564.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACCACTGAAGCCGGA	NA	False	NA	NA	False	NA	NA	NA	79480203	79530584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_79480360_79530563
ES.12277.3	chr15	+	181	1	Intergenic	novelGene_10258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAATTAA	NA	False	NA	NA	False	NA	NA	NA	79491105	79491286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79491100_79491300
ES.12277.4	chr15	+	177	1	Intergenic	novelGene_10259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79498156	79498333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79498200_79498300
ES.12277.5	chr15	+	185	1	Intergenic	novelGene_10260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTCTGGTCCAAC	NA	False	NA	NA	False	AATAAA	-16	NA	79501547	79501732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79501500_79501700
ES.12278.1	chr15	+	1594	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	-17	-430	-17	430	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9542	False	NA	NA	False	NA	NA	NA	79543382	79552291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ES.12278.3	chr15	+	1134	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	15	-2	15	2	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGTAGCAAAAATAGAT	9574	False	NA	NA	False	ATTAAA	-16	NA	79543414	79551863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ES.12278.4	chr15	+	4821	4	NNC	ENSMUSG00000022428.9	novel	1147	5	NA	NA	45	2961	intron_retention	TRUE	canonical	0	0	junction_3	82.9712132141156	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAACAAAAACCAGA	9604	False	NA	NA	False	NA	NA	NA	79543444	79554822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79543495_79549846_79549953_79550031_79554553_79554678
ES.12279.1	chr15	+	1054	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	-13	528	-13	192	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGTGTTTGTGGTAGT	8165	False	NA	26	True	ATTAAA	-22	NA	79555048	79557073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.3	chr15	+	517	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	6	1046	6	-211	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGGAACTTTTTATTC	8184	False	NA	10	True	NA	NA	NA	79555067	79556555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.4	chr15	+	1894	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	11	-336	-9	336	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTGGCCTTTTGTTTTT	8189	False	NA	NA	False	AATAGA	-45	NA	79555072	79557937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.5	chr15	+	1175	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	12	382	-8	338	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTGTGTGGTATGT	8190	False	NA	NA	False	AAAAAG	-14	NA	79555073	79557219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.7	chr15	+	1530	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	21	18	1	-18	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGCTTGTTATCATA	8199	False	NA	NA	False	NA	NA	NA	79555082	79557583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.8	chr15	+	713	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	21	835	1	0	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTTACATGCCCATTG	8199	False	NA	5	True	AATAAA	-13	NA	79555082	79556766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ES.12279.9	chr15	+	816	3	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	2	182	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	515	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTTATTGCTGTGT	8200	False	NA	16	True	ATTAAA	-12	NA	79555083	79557063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79555210_79555373_79555493_79556492
ES.1228.1	chr1	-	2256	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	0	2	0	-2	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTTATACCTTTCC	NA	False	NA	-18	True	CATAAA	-21	NA	121495718	121481565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.10	chr1	-	4267	11	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	71	-6	intron_retention	FALSE	canonical	3	390	junction_10	128.258683916529	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495647	121481569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.11	chr1	-	2141	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	89	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	224.651257508165	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495629	121481569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482966_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.12	chr1	-	2200	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	46	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	224.166775092911	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495672	121481569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489319_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.13	chr1	-	2202	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	214.133136155991	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAATGTTTTTTATACC	NA	False	NA	-23	True	CATAAA	-16	NA	121495697	121481570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495547
ES.1228.14	chr1	-	2226	13	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	-20	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	214.133136155991	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121495471	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495296
ES.1228.15	chr1	-	3295	12	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	1817	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	218.121355258569	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121493634	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121484984_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ES.1228.16	chr1	-	4092	11	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	81	-8	intron_retention	FALSE	canonical	1	1	junction_6	228.83419761915	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121495637	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489294_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.17	chr1	-	3267	12	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	29	-8	intron_retention	FALSE	canonical	1	1	junction_7	232.057630345681	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121495689	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489294_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.18	chr1	-	3577	11	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	18	-8	intron_retention	FALSE	canonical	3	390	junction_10	132.97236555014	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121495700	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.19	chr1	-	4751	10	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	26	-8	intron_retention	FALSE	canonical	3	390	junction_9	134.005896313982	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATGTTTTTTATAC	NA	False	NA	-24	True	CATAAA	-15	NA	121495692	121481571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121485248_121486139_121487057_121487860_121488001_121489009_121489325_121489418_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.2	chr1	-	3652	12	ISM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	225	3	-42	-3	3prime_fragment	FALSE	canonical	3	571	junction_7	87.1971263458562	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTTTTATACCTTTC	NA	False	NA	-19	True	CATAAA	-20	NA	121495493	121481566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609
ES.1228.20	chr1	-	4463	12	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	50	-12	intron_retention	FALSE	canonical	1	1	junction_8	233.230067664549	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTAATGTTTTTT	NA	False	NA	-28	True	CATAAA	-11	NA	121495668	121481575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489294_121489418_121489520_121489787_121492333_121493609_121493898_121495519
ES.1228.21	chr1	-	4135	11	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	48	-13	intron_retention	FALSE	canonical	1	1	junction_6	229.621079171752	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTTTTAATGTTTTT	NA	False	NA	-29	True	CATAAA	-10	NA	121495670	121481576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121483123_121483419_121483477_121485133_121486293_121486894_121487057_121487860_121488001_121489009_121489294_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.22	chr1	-	2109	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	82	-25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	225.732634375764	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATTTTATCACTGT	NA	False	NA	-41	True	TTTAAA	-10	NA	121495636	121481588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486251_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.23	chr1	-	2194	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	57	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	213.87864874477	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATAAAACAAATTTTATCA	NA	False	NA	-45	True	TTTAAA	-6	NA	121495661	121481592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493920_121495519
ES.1228.3	chr1	-	3837	12	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	74	-4	intron_retention	FALSE	canonical	3	390	junction_11	121.592327944143	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	-20	True	CATAAA	-19	NA	121495644	121481567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.4	chr1	-	4534	12	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	18	-4	intron_retention	FALSE	canonical	3	390	junction_11	127.74548559894	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	-20	True	CATAAA	-19	NA	121495700	121481567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121492333_121493609_121493898_121495519
ES.1228.5	chr1	-	3310	12	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	21	-4	intron_retention	FALSE	canonical	3	390	junction_11	127.371520098613	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTTTATACCTTT	NA	False	NA	-20	True	CATAAA	-19	NA	121495697	121481567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.6	chr1	-	3009	12	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	48	-5	intron_retention	FALSE	canonical	3	390	junction_11	125.700549319299	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTTTTTATACCTT	NA	False	NA	-21	True	CATAAA	-18	NA	121495670	121481568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.7	chr1	-	2458	12	NIC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	62	-6	intron_retention	FALSE	canonical	3	390	junction_11	127.087007353295	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495656	121481569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489924_121492221_121492333_121493609_121493898_121495519
ES.1228.8	chr1	-	3171	13	NNC	ENSMUSG00000001674.12	novel	2258	13	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	219.945621436047	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTTTTTATACCT	NA	False	NA	-22	True	CATAAA	-17	NA	121495691	121481569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_121481868_121482944_121483123_121483419_121484423_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ES.12280.1	chr15	-	2356	13	NNC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	24.4419664148002	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	79489300	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79475583_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.10	chr15	-	2139	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	-32	112	-31	2	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAGACTATTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	79489341	79445809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.11	chr15	-	3859	6	ISM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	16163	871	-3049	15	intron_retention	FALSE	canonical	3	59	junction_5	11.0742945599257	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATCTTAAAAGTTCC	NA	False	NA	11	True	ATTAAA	-30	NA	79473146	79446568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869
ES.12280.12	chr15	-	798	7	NIC	ENSMUSG00000022429.12	novel	1772	9	NA	NA	13	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.9066695427091	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCGATGTGAAGCTTAT	NA	False	NA	-7	True	ATTAAA	-12	NA	79489287	79446586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79446784_79452839_79452957_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.13	chr15	-	1191	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	-35	775	-25	-3	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCGATGTGAAGCTTAT	NA	False	NA	-7	True	ATTAAA	-12	NA	79489335	79446586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.14	chr15	-	1140	11	NIC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	24.8927700346908	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGCGATGTGAAGCTTA	NA	False	NA	-8	True	ATTAAA	-11	NA	79489288	79446587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.15	chr15	-	2129	1	Intergenic	novelGene_10256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACCAAA	NA	False	NA	NA	False	NA	NA	NA	79466466	79464337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79464300_79466500
ES.12280.16	chr15	-	818	4	ISM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	-16	38047	-6	-37275	5prime_fragment	FALSE	canonical	3	81	junction_3	2.82842712474619	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTTACCTTTATACTA	NA	False	NA	NA	False	ATTAAA	-15	NA	79489316	79483858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.2	chr15	-	2266	15	NNC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.4808827713756	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	79489306	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79483035_79483089_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.3	chr15	-	2667	1	NIC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	21084	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	7177	False	NA	NA	False	AGTAAA	-13	NA	79448367	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79445700_79448400
ES.12280.4	chr15	-	5212	13	NIC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	31	junction_6	18.9932371004933	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	79489315	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.5	chr15	-	2206	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	10	3	1	-3	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	79489299	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.6	chr15	-	2096	10	NNC	ENSMUSG00000022429.12	novel	1931	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.415639022707	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGATTCTGCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	79489300	79445700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469298_79469373_79475583_79475848_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.7	chr15	-	5556	4	ISM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	15951	4	-3261	-4	intron_retention	FALSE	canonical	3	62	junction_2	7.40870359029762	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTTTTGATTCTGCA	NA	False	NA	NA	False	AGTAAA	-12	NA	79473358	79445701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062
ES.12280.8	chr15	-	1920	11	NIC	ENSMUSG00000022429.12	novel	2219	14	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	24.8927700346908	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAGACTATTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	79489290	79445809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ES.12280.9	chr15	-	4725	6	ISM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	16056	112	-3156	2	intron_retention	FALSE	canonical	3	59	junction_5	11.0742945599257	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAGACTATTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	79473253	79445809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869
ES.12281.1	chr15	-	3417	5	Fusion	ENSMUSG00000022426.7_ENSMUSG00000042564.14	novel	3440	4	NA	NA	36	837	multi-exon	TRUE	non_canonical	0	0	junction_1	55.8093854114162	225	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGTAAAGCAGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	79572084	79495680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79495699_79558456_79560381_79561297_79561493_79561599_79561729_79570933
ES.12281.10	chr15	-	3447	3	NIC	ENSMUSG00000022426.7	novel	3440	4	NA	NA	98	-2	intron_retention	FALSE	canonical	3	116	junction_1	3.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGTCTACTTGTCTG	NA	False	NA	-5	True	ATTAAA	-13	NA	79572022	79558453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79560381_79561297_79561729_79570933
ES.12281.11	chr15	-	5118	1	NIC	ENSMUSG00000022426.7	novel	3440	4	NA	NA	8534	-17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAAAGCTGAACAC	NA	False	NA	-20	True	NA	NA	NA	79563586	79558468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79558500_79563600
ES.12281.12	chr15	-	3312	1	FSM	ENSMUSG00000116239.2	ENSMUST00000230256.2	221	1	-582	-2509	-582	2509	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGGCTTGGCATAATG	NA	False	NA	NA	False	NA	NA	NA	79566105	79562793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79562800_79566100
ES.12281.2	chr15	-	912	1	NIC	ENSMUSG00000042564.14	novel	5187	19	NA	NA	943	-3965	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGGCTCTTTTGGGAT	9990	False	NA	NA	False	NA	NA	NA	79524382	79523470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79523500_79524400
ES.12281.3	chr15	-	187	1	Intergenic	novelGene_10261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAGAAGGA	8861	False	NA	NA	False	NA	NA	NA	79537905	79537718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79537700_79537900
ES.12281.4	chr15	-	3371	5	Antisense	novelGene_ENSMUSG00000022428.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTCTGTGCACCAT	NA	False	NA	NA	False	NA	NA	NA	79555004	79547297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79550076_79550564_79550733_79550981_79551216_79553713_79553831_79554930
ES.12281.5	chr15	-	1277	5	Antisense	novelGene_ENSMUSG00000022428.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGGAAGCACAAAATCC	NA	False	NA	NA	False	AAGAAA	-22	NA	79555025	79549412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79550076_79550564_79550733_79550981_79551216_79553713_79553831_79554930
ES.12281.6	chr15	-	1125	5	Antisense	novelGene_ENSMUSG00000022428.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGAGTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	79555025	79549564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79550076_79550564_79550733_79550981_79551216_79553713_79553831_79554930
ES.12281.7	chr15	-	183	1	Intergenic	novelGene_10262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTCC	NA	False	NA	NA	False	NA	NA	NA	79555845	79555662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79555700_79555800
ES.12281.8	chr15	-	6440	2	NIC	ENSMUSG00000022426.7	novel	3440	4	NA	NA	59	2035	intron_retention	FALSE	canonical	3	123	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGGAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79572061	79556416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79561729_79570933
ES.12281.9	chr15	-	3656	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	-211	-5	-211	5	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTACTTGTCTGATTATGT	NA	False	NA	2	True	ATTAAA	-20	NA	79572331	79558446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ES.12282.1	chr15	+	3448	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	2	-1	2	1	multi-exon	TRUE	canonical	3	199	junction_6	19.3826198026279	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCATGTTCCCTGCCCA	NA	False	NA	18	True	AATAAA	-19	NA	79575047	79605681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.10	chr15	+	2385	7	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	41	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.8659495520349	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGACAGTGTCATGTTC	NA	False	NA	10	True	AATAAA	-11	NA	79575086	79605673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79591932_79601795_79601975_79603228_79603430_79604210
ES.12282.12	chr15	+	3409	12	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.1593902506386	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	16	True	AATAAA	-17	NA	79575090	79605679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592251_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.13	chr15	+	3287	11	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	47	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	68.9611484823158	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTGTCATGTTCCCTG	NA	False	NA	14	True	AATAAA	-15	NA	79575092	79605677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79575300_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.16	chr15	+	3392	9	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	50	15	intron_retention	FALSE	canonical	3	199	junction_6	20.8802388635762	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTCCCCTTTTTGTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	79575095	79603544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600470_79601183_79601320_79601795
ES.12282.17	chr15	+	3450	13	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	82.9592855294424	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	16	True	AATAAA	-17	NA	79575101	79605679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578356_79578469_79578695_79578754_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.19	chr15	+	111	1	Intergenic	novelGene_10263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	79580163	79580274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79580200_79580300
ES.12282.2	chr15	+	4683	11	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	19	-1	intron_retention	FALSE	canonical	3	199	junction_6	20.3098498271159	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	16	True	AATAAA	-17	NA	79575064	79605679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79603430_79604210
ES.12282.20	chr15	+	2627	8	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	-4079	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	80.9227396713579	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGACAGTGTCATGTTC	NA	False	NA	10	True	AATAAA	-11	NA	79596353	79605673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79596421_79597426_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.3	chr15	+	3618	13	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6501186124725	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	16	True	AATAAA	-17	NA	79575076	79605679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578021_79578223_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.4	chr15	+	3402	12	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.756613534665	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGACAGTGTCATGTT	NA	False	NA	9	True	AATAAA	-10	NA	79575076	79605672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591903_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.6	chr15	+	3243	12	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.8303605005803	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575077	79605680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79592069_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ES.12282.9	chr15	+	1673	10	NNC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.557280862568	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCATGTTCCCTGCC	NA	False	NA	16	True	AATAAA	-17	NA	79575085	79605679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601274_79605519
ES.12283.1	chr15	-	1666	3	ISM	ENSMUSG00000042524.15	ENSMUST00000231189.2	4413	16	15488	0	9078	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGAGTGTGCTTTTTTCT	9696	False	NA	-1	True	AATAAA	-15	NA	79611074	79608271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79609762_79610742_79610836_79610991
ES.12284.1	chr15	+	1383	2	NIC	ENSMUSG00000087543.2	novel	5404	4	NA	NA	-544	-12576	intron_retention	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTGACTCTGGCCTTG	NA	False	NA	NA	False	NA	NA	NA	79626354	79629019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79627432_79628713
ES.12284.2	chr15	+	1145	4	NNC	ENSMUSG00000087543.2	novel	5404	4	NA	NA	-523	-4331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCTGTTTCTGGCTGA	NA	False	NA	NA	False	GATAAA	-19	NA	79626375	79637264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79626658_79627279_79627432_79628713_79628870_79636709
ES.12284.4	chr15	+	1402	1	Genic_Genomic	ENSMUSG00000087543.2	novel	NA	NA	NA	NA	-6	-13301	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTATTATCATGTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	79626892	79628294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_79626900_79628300
ES.12284.5	chr15	+	6481	4	NNC	ENSMUSG00000087543.2	novel	5404	4	NA	NA	3	-6192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.35702260395516	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAGCCTTATTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	79626901	79635403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79626987_79627283_79627432_79628713_79634398_79634839
ES.12285.1	chr15	-	171	1	Intergenic	novelGene_10264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCTATTGAATT	NA	False	NA	NA	False	NA	NA	NA	79630871	79630700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79630700_79630900
ES.12286.1	chr15	+	6374	1	Genic_Genomic	ENSMUSG00000087543.2	novel	NA	NA	NA	NA	10850	2527	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTTGTTTGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	79637748	79644122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_79637700_79644100
ES.12287.1	chr15	-	1466	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	9	-3	9	3	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGGTGTATTGAACT	252	False	NA	NA	False	ATTAAA	-20	NA	79658659	79645650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
ES.12287.2	chr15	-	1509	4	NIC	ENSMUSG00000022420.17	novel	1472	4	NA	NA	11	-3	intron_retention	FALSE	canonical	2	4	junction_1	63.754738385995	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTCTGTGGTGTAT	254	False	NA	NA	False	ATTAAA	-14	NA	79658657	79645656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79646778_79647710_79647795_79649016_79649223_79658559
ES.12287.3	chr15	-	1551	5	NIC	ENSMUSG00000022420.17	novel	1357	7	NA	NA	-22	-10	intron_retention	FALSE	canonical	2	4	junction_1	55.4363373609765	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAACTTAGTCTGT	272	False	NA	NA	False	ATTAAA	-7	NA	79658639	79645663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79646778_79647710_79647795_79649016_79649223_79649987_79650055_79658559
ES.12287.4	chr15	-	1521	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2513	-674	8	-10	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAACTTAGTCTGT	251	False	NA	NA	False	ATTAAA	-7	NA	79658660	79645663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
ES.12288.1	chr15	+	1679	1	Intergenic	novelGene_10266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCCACGGGAACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	79706363	79708042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79706400_79708000
ES.12289.1	chr15	-	5117	5	FSM	ENSMUSG00000022421.21	ENSMUST00000023057.10	5006	5	-111	0	-111	0	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTCTTCTGTCATATG	NA	False	NA	-1	True	AATAAA	-17	NA	79689078	79670551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
ES.12289.10	chr15	-	3185	6	NNC	ENSMUSG00000089715.13	novel	996	6	NA	NA	0	-3	intron_retention	FALSE	canonical	1	2	junction_1	59.0016948909097	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCCAGCCCCCTGGATG	NA	False	NA	-7	True	AATAAA	-19	NA	79718438	79708099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79710074_79712240_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.11	chr15	-	6516	1	FSM	ENSMUSG00000089715.13	ENSMUST00000230681.2	7850	1	3534	-2200	3383	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCAGCCCCCTGGAT	NA	False	NA	-8	True	AATAAA	-18	NA	79714616	79708100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79708100_79714600
ES.12289.12	chr15	-	5430	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	-133	-2241	-45	-4	multi-exon	FALSE	canonical	2	10	junction_1	62.5114989421946	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCAGCCCCCTGGAT	NA	False	NA	-8	True	AATAAA	-18	NA	79718571	79708100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.13	chr15	-	3324	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	318	2164	-45	40	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCATTGTAGGACTCCTA	NA	False	NA	NA	False	NA	NA	NA	79718571	79710260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.14	chr15	-	3196	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	-62	-78	-19	37	multi-exon	FALSE	canonical	2	10	junction_1	62.5114989421946	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCATTGTAGGACTC	NA	False	NA	NA	False	NA	NA	NA	79718500	79710263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.15	chr15	-	2964	6	NNC	ENSMUSG00000089715.13	novel	996	6	NA	NA	-16	35	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	59.0016948909097	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGACCATTGTAGGAC	NA	False	NA	NA	False	NA	NA	NA	79718497	79710265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79712608_79712888_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.16	chr15	-	6779	5	NNC	ENSMUSG00000089715.13	novel	5806	5	NA	NA	16	35	intron_retention	FALSE	non_canonical	0	0	junction_1	66.8033494669242	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGACCATTGTAGGAC	NA	False	NA	NA	False	NA	NA	NA	79718459	79710265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79711696_79712656_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.17	chr15	-	2746	6	NNC	ENSMUSG00000089715.13	novel	996	6	NA	NA	11	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7749111249862	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGACCATTGTAGGA	NA	False	NA	NA	False	NA	NA	NA	79718416	79710266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79712224_79712640_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.18	chr15	-	2494	6	NNC	ENSMUSG00000089715.13	novel	996	6	NA	NA	8	33	intron_retention	FALSE	canonical	0	0	junction_1	59.7749111249862	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGACCATTGTAGG	NA	False	NA	NA	False	NA	NA	NA	79718467	79710267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79711522_79712240_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.19	chr15	-	7810	4	FSM	ENSMUSG00000089715.13	ENSMUST00000129614.2	576	4	-57	-7177	-6	32	multi-exon	FALSE	canonical	3	140	junction_1	9.89949493661167	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGACCATTGTAG	NA	False	NA	NA	False	NA	NA	NA	79718532	79710268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.21	chr15	-	3163	4	FSM	ENSMUSG00000089715.13	ENSMUST00000148358.2	450	4	-48	-2665	-3	-12	multi-exon	FALSE	canonical	1	2	junction_1	74.3370701601832	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718529	79710312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79713180_79717902_79717969_79718115_79718160_79718343
ES.12289.22	chr15	-	3091	4	NIC	ENSMUSG00000089715.13	novel	5806	5	NA	NA	3	-13	intron_retention	FALSE	canonical	1	1	junction_3	61.1791540386829	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTTAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718435	79710313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79713180_79717712_79717780_79717902_79717969_79718343
ES.12289.23	chr15	-	7538	5	NNC	ENSMUSG00000089715.13	novel	3056	5	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	66.8033494669242	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718464	79710341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79714467_79714597_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.24	chr15	-	3152	5	NNC	ENSMUSG00000089715.13	novel	5806	5	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_3	61.1085100456557	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718492	79710341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79713180_79717712_79717780_79717902_79717969_79718127_79718160_79718343
ES.12289.25	chr15	-	617	5	NNC	ENSMUSG00000089715.13	novel	546	5	NA	NA	-12	151	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	64.227622562259	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACCCCTTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	79718450	79716621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79716955_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.3	chr15	-	4534	8	FSM	ENSMUSG00000089837.10	ENSMUST00000023060.13	1162	8	-49	-3323	-49	3323	multi-exon	FALSE	canonical	2	3	junction_4	65.4759653675784	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTCTTCTGTCATAT	NA	False	NA	-2	True	AATAAA	-16	NA	79718487	79670552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.4	chr15	-	5419	9	NNC	ENSMUSG00000089837.10	novel	1453	9	NA	NA	3	3321	intron_retention	FALSE	canonical	0	0	junction_4	63.1870981688509	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGCTCTTCTGTCAT	NA	False	NA	-4	True	AATAAA	-14	NA	79718435	79670554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79712240_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.5	chr15	-	4783	9	FSM	ENSMUSG00000089837.10	ENSMUST00000089299.6	1453	9	-9	-3321	-9	3321	multi-exon	FALSE	canonical	0	0	junction_4	63.1870981688509	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGCTCTTCTGTCAT	NA	False	NA	-4	True	AATAAA	-14	NA	79718447	79670554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79712888_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.12289.6	chr15	-	2079	5	FSM	ENSMUSG00000022421.21	ENSMUST00000023057.10	5006	5	20	2907	20	4	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATCTTCCTGGGTTAC	NA	False	NA	NA	False	TATAAA	-15	NA	79688947	79673458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
ES.12289.7	chr15	-	1917	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	-16	3047	-16	-137	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCGGACCCCACTAATTC	NA	False	NA	NA	False	NA	NA	NA	79688926	79673599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
ES.12289.8	chr15	-	1115	1	Intergenic	novelGene_10265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79703625	79702510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79702500_79703600
ES.12289.9	chr15	-	5512	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	294	0	-69	0	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCCCCCTGGATGGGG	NA	False	NA	-4	True	AATAAA	-22	NA	79718595	79708096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ES.1229.1	chr1	+	3231	1	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTATCCTACATATAA	NA	False	NA	NA	False	NA	NA	NA	125346524	125349755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_125346500_125349800
ES.12290.1	chr15	-	167	1	Intergenic	novelGene_10267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTGAGCAACACAACC	8461	False	NA	NA	False	NA	NA	NA	79720667	79720500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79720500_79720700
ES.12291.1	chr15	+	186	1	Intergenic	novelGene_10268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	79727075	79727261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79727100_79727300
ES.12292.1	chr15	+	2004	2	FSM	ENSMUSG00000115971.2	ENSMUST00000230701.2	2556	2	27	525	27	-525	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCAGTTCCCCAGACA	NA	False	NA	NA	False	NA	NA	NA	79727390	79730439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79727458_79728502
ES.12292.2	chr15	+	2273	2	FSM	ENSMUSG00000115971.2	ENSMUST00000230701.2	2556	2	38	245	38	-245	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTAGATTGGGCAGATC	NA	False	NA	NA	False	NA	NA	NA	79727401	79730719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79727458_79728502
ES.12293.1	chr15	+	1085	1	Intergenic	novelGene_10269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGTTAATCCTATGG	3399	False	NA	NA	False	NA	NA	NA	79737365	79738450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79737400_79738400
ES.12294.1	chr15	+	177	1	Intergenic	novelGene_10270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATTA	3238	False	NA	NA	False	NA	NA	NA	79742873	79743050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79742900_79743000
ES.12295.1	chr15	+	1917	9	NNC	ENSMUSG00000009585.19	novel	650	3	NA	NA	-18267	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.746794850722	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	NA	False	NA	-6	True	NA	NA	NA	79757592	79792107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79757736_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.11	chr15	+	2272	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-6	23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	285.065315980391	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTACTCTTCCCATC	7496	False	NA	NA	False	AATAAA	-13	NA	79775853	79800130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790580_79790804_79791051_79791165_79799160
ES.12295.12	chr15	+	1869	1	FSM	ENSMUSG00000115902.2	ENSMUST00000230175.2	3589	1	2125	-405	2125	405	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAGAAAAAAA	7500	False	NA	NA	False	NA	NA	NA	79775857	79777726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79775900_79777700
ES.12295.13	chr15	+	3660	5	NNC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-1	-1284	intron_retention	FALSE	non_canonical	0	0	junction_2	244.001408807408	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAACAA	7501	False	NA	NA	False	NA	NA	NA	79775858	79783856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776024_79779611_79779760_79780295_79781453_79781527_79782173_79782311
ES.12295.14	chr15	+	1896	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	264.608643802503	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	7501	False	NA	-10	True	NA	NA	NA	79775858	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790580_79790804_79791051_79791165_79791504
ES.12295.15	chr15	+	2112	9	NIC	ENSMUSG00000009585.19	novel	1953	9	NA	NA	52	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	239.760785732363	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTAAGTTGTGCATG	7953	False	NA	2	True	NA	NA	NA	79776310	79792115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776641_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.16	chr15	+	3035	9	NIC	ENSMUSG00000009585.19	novel	2459	9	NA	NA	92	441	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	239.760785732363	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCATTTAGTTCATTT	7993	False	NA	-14	True	NA	NA	NA	79776350	79793078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776641_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.17	chr15	+	2088	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	-131	-4	-131	2	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCATGATTGGGTC	8115	False	NA	10	True	NA	NA	NA	79776472	79792123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.18	chr15	+	2982	7	NIC	ENSMUSG00000009585.19	novel	1953	9	NA	NA	-95	-4	intron_retention	FALSE	canonical	3	15	junction_1	255.69361005356	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	8151	False	NA	-10	True	NA	NA	NA	79776508	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776641_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79790804_79791051
ES.12295.19	chr15	+	1863	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	-66	180	-21	0	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	8225	False	NA	-6	True	NA	NA	NA	79776582	79792107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.2	chr15	+	220	1	Intergenic	novelGene_10271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTATTTTGCAAACCGGG	2215	False	NA	NA	False	AAAAAG	-33	NA	79770572	79770792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79770600_79770800
ES.12295.20	chr15	+	1717	8	NIC	ENSMUSG00000009585.19	novel	2360	8	NA	NA	-19	-14	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	295.832964453157	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGTCAAAGAAAGAA	8227	False	NA	-20	True	NA	NA	NA	79776584	79792093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776641_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.21	chr15	+	2958	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	-8	-491	-3	484	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTTATTTTTATTT	8243	False	NA	29	True	NA	NA	NA	79776600	79793121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.22	chr15	+	3278	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	2	-821	-1	814	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTCTTCT	8253	False	NA	NA	False	CATAAA	-23	NA	79776610	79793451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.23	chr15	+	1890	9	NIC	ENSMUSG00000009585.19	novel	1953	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	228.012609300451	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	8254	False	NA	-10	True	NA	NA	NA	79776611	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790580_79790804_79791051_79791165_79791504
ES.12295.24	chr15	+	1780	8	NIC	ENSMUSG00000009585.19	novel	2360	8	NA	NA	11	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	283.065219282318	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	8265	False	NA	-10	True	NA	NA	NA	79776622	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790580_79790804_79791051_79791165_79791504
ES.12295.25	chr15	+	4880	11	NNC	ENSMUSG00000009585.19	novel	2459	9	NA	NA	15	2749	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	268.825519621929	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGTGGGTACCACTA	8269	False	NA	NA	False	NA	NA	NA	79776626	79795386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504_79792496_79792570_79793462_79793703
ES.12295.26	chr15	+	2720	10	NNC	ENSMUSG00000009585.19	novel	2459	9	NA	NA	15	336	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	229.969133731324	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAACAAACAAAC	8269	False	NA	NA	False	NA	NA	NA	79776626	79792973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504_79792507_79792570
ES.12295.27	chr15	+	1766	8	NIC	ENSMUSG00000009585.19	novel	2360	8	NA	NA	15	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	278.968435051534	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	8269	False	NA	-10	True	NA	NA	NA	79776626	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776771_79779611_79779760_79781944_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.28	chr15	+	3158	8	FSM	ENSMUSG00000009585.19	ENSMUST00000165537.8	2360	8	23	-821	-11	814	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTCTTCT	8274	False	NA	NA	False	CATAAA	-23	NA	79776631	79793451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.29	chr15	+	3983	10	NNC	ENSMUSG00000009585.19	novel	2459	9	NA	NA	-10	1783	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	229.969133731324	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTCTGGTCCTCAAT	8275	False	NA	NA	False	NA	NA	NA	79776632	79794420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504_79793454_79793695
ES.12295.3	chr15	+	142	1	Intergenic	novelGene_10273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTAAAAATAG	4232	False	NA	NA	False	NA	NA	NA	79772589	79772731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79772600_79772700
ES.12295.30	chr15	+	2090	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	30	-167	-9	-1	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCCCTCACCCATCAG	8276	False	NA	NA	False	AATAAA	-14	NA	79776633	79792286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.31	chr15	+	2794	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	39	-374	-1	367	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTTCCTCTGTTGCTC	8290	False	NA	-88	True	NA	NA	NA	79776647	79793004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.32	chr15	+	2847	9	NIC	ENSMUSG00000009585.19	novel	2459	9	NA	NA	1	478	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	224.011578941804	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTCATTGTTATTT	8299	False	NA	23	True	NA	NA	NA	79776656	79793115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776771_79779611_79779760_79781944_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.33	chr15	+	6424	4	Fusion	ENSMUSG00000115902.2_ENSMUSG00000009585.19	novel	650	3	NA	NA	5	-1247	intron_retention	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGAGTAAAAGGCCA	8303	False	NA	NA	False	NA	NA	NA	79776660	79783893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_79778402_79778599_79779760_79780295_79781453_79781527
ES.12295.34	chr15	+	3670	2	NNC	ENSMUSG00000009585.19	novel	3053	2	NA	NA	-536	17	intron_retention	FALSE	non_canonical	0	0	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACTGAAGGGCCATCAC	NA	False	NA	NA	False	NA	NA	NA	79781412	79785157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79781453_79781527
ES.12295.35	chr15	+	1304	5	NNC	ENSMUSG00000009585.19	novel	721	2	NA	NA	-1020	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	299.040549089919	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCAAAGAAAGAAAGACAAG	NA	False	NA	-13	True	NA	NA	NA	79789303	79792100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79789480_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.36	chr15	+	1133	4	ISM	ENSMUSG00000009585.19	ENSMUST00000023054.14	1842	8	10419	4	-681	-4	3prime_fragment	FALSE	canonical	3	675	junction_1	14.4452991200136	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	NA	False	NA	-10	True	NA	NA	NA	79789642	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.4	chr15	+	1989	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-44	-5	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	7458	False	NA	1	True	NA	NA	NA	79775815	79792114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.5	chr15	+	1876	8	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-41	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	278.410209758836	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	7461	False	NA	-10	True	NA	NA	NA	79775818	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.6	chr15	+	2928	6	NNC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-31	-1252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	267.857126095238	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAAAAGAGTAAAA	7471	False	NA	NA	False	NA	NA	NA	79775828	79783888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776024_79779611_79779760_79780295_79781453_79781527_79782173_79782311_79782427_79783220
ES.12295.7	chr15	+	1806	8	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	304.418616180993	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGACAAGATT	7482	False	NA	-10	True	NA	NA	NA	79775839	79792103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781944_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.8	chr15	+	2884	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-7	409	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAAAGATTTATGGCC	7495	False	NA	-46	True	AATAGA	-14	NA	79775852	79793046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12295.9	chr15	+	1965	9	NNC	ENSMUSG00000009585.19	novel	826	5	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	243.479946556179	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATTAAGTTGTGCAT	7495	False	NA	1	True	NA	NA	NA	79775852	79792114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79776037_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ES.12296.1	chr15	+	175	1	Intergenic	novelGene_10274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCATGT	NA	False	NA	NA	False	NA	NA	NA	79807118	79807293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79807100_79807300
ES.12297.1	chr15	+	5115	1	Intergenic	novelGene_10275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTTACTTGGTAGGCA	NA	False	NA	NA	False	NA	NA	NA	79809299	79814414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79809300_79814400
ES.12298.1	chr15	-	159	1	Intergenic	novelGene_10272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	2866	False	NA	NA	False	NA	NA	NA	79771575	79771416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79771400_79771600
ES.12298.2	chr15	-	500	3	Antisense	novelGene_ENSMUSG00000115902.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGTGAGATGGCTCA	2587	False	NA	NA	False	NA	NA	NA	79788360	79771575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79771894_79772786_79772911_79788302
ES.12298.3	chr15	-	463	1	Antisense	novelGene_ENSMUSG00000115902.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATAGCGCCAGTCAC	NA	False	NA	NA	False	NA	NA	NA	79775836	79775373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79775400_79775800
ES.12298.4	chr15	-	4786	8	Antisense	novelGene_ENSMUSG00000115902.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGGAAGACCCCCAGAA	NA	False	NA	NA	False	NA	NA	NA	79794178	79776671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79776768_79779608_79779763_79781897_79782172_79782310_79782425_79783218_79783318_79789639_79790804_79791051_79793454_79793695
ES.12298.5	chr15	-	6349	3	Antisense	novelGene_ENSMUSG00000009585.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTAGGCTTGGTTGCCA	NA	False	NA	NA	False	NA	NA	NA	79794178	79787511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_79787975_79788050_79793545_79793786
ES.12299.1	chr15	-	3278	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-10	-2740	-9	98	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTCCATGGTATGGGA	NA	False	NA	91	True	NA	NA	NA	79855329	79799909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.10	chr15	-	3498	6	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-42	6	intron_retention	FALSE	canonical	3	31	junction_2	172.968205170777	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855362	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.100	chr15	-	5218	1	Genic_Genomic	ENSMUSG00000053411.17	novel	NA	NA	NA	NA	-6	-35360	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGGGTATCTTCTCGGG	NA	False	NA	NA	False	NA	NA	NA	79855326	79850108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_79850100_79855300
ES.12299.101	chr15	-	4111	1	Genic_Genomic	ENSMUSG00000053411.17	novel	NA	NA	NA	NA	-5	-36466	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATCTTGTTCTATATGT	NA	False	NA	NA	False	NA	NA	NA	79855325	79851214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_79851200_79855300
ES.12299.11	chr15	-	2960	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855329	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.12	chr15	-	5731	5	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-8	6	intron_retention	FALSE	canonical	3	258	junction_4	92.290302849216	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.13	chr15	-	3242	7	NNC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-4	6	intron_retention	FALSE	canonical	2	4	junction_5	186.069655416101	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855324	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79809224_79809286_79814786_79814831_79855069
ES.12299.14	chr15	-	2996	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-8	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.15	chr15	-	5333	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-10	6	intron_retention	FALSE	canonical	2	8	junction_1	185.197192203338	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816863	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802124_79802477_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.17	chr15	-	5490	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	2	6	intron_retention	FALSE	canonical	0	0	junction_3	173.649071405522	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855317	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79805636_79807672_79807739_79814786_79814831_79855069
ES.12299.19	chr15	-	2854	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	39	6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	169.259826565222	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816930	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802124_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.2	chr15	-	5812	5	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-19	6	intron_retention	FALSE	canonical	3	216	junction_4	109.82372239184	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816988	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.20	chr15	-	2686	5	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-8	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	199.397059908114	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.21	chr15	-	5427	6	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	11	6	intron_retention	FALSE	canonical	3	156	junction_1	138.613996407289	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816829	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.22	chr15	-	3330	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-8	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	195.17673832625	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803306_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.23	chr15	-	3060	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	175.453380955993	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855327	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.24	chr15	-	2769	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	199.92665321729	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818080	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ES.12299.25	chr15	-	3057	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	200.860993945786	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818043	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ES.12299.26	chr15	-	3023	6	FSM	ENSMUSG00000053411.17	ENSMUST00000146719.9	714	6	38	-2347	-31	6	multi-exon	FALSE	canonical	3	28	junction_5	171.122646075848	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818062	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ES.12299.28	chr15	-	3287	6	FSM	ENSMUSG00000053411.17	ENSMUST00000128931.8	663	6	-8	-2616	-8	6	multi-exon	FALSE	canonical	3	16	junction_2	178.26384939185	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.29	chr15	-	3141	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-6	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	191.083911474749	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855326	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069_79855146_79855240
ES.12299.3	chr15	-	5536	6	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-2	6	intron_retention	FALSE	canonical	3	62	junction_1	162.17940683083	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855322	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.30	chr15	-	3085	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	202.915786292074	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855325	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.31	chr15	-	3133	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	607	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	202.245254226503	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816110	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79815662_79815972_79816023
ES.12299.32	chr15	-	5528	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-7	6	intron_retention	FALSE	canonical	3	8	junction_1	185.197192203338	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79816976	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.34	chr15	-	4198	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-14	5	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	177.916334894304	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTGGTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-29	NA	79818045	79800002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.35	chr15	-	3454	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-2	5	intron_retention	FALSE	canonical	3	258	junction_4	103.424791515381	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTGGTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-29	NA	79855322	79800002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.36	chr15	-	5252	6	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	16	5	intron_retention	FALSE	non_canonical	0	0	junction_1	187.917641534796	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTGGTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-29	NA	79816953	79800002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79801605_79802128_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.37	chr15	-	3062	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	153.192326468687	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79816975	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.38	chr15	-	3171	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	195.742438016942	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79816750	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803306_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.39	chr15	-	5451	6	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-2	4	intron_retention	FALSE	canonical	3	8	junction_1	181.106156714784	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79855322	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.4	chr15	-	4225	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	193.022451198472	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818034	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.40	chr15	-	3298	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	39	4	intron_retention	FALSE	canonical	3	8	junction_3	204.765448474319	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79816930	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.41	chr15	-	3243	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-48	4	intron_retention	FALSE	non_canonical	0	0	junction_3	230.072452356499	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79855368	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79803460_79803597_79805572_79805640_79807672_79807739_79814786_79814831_79855185
ES.12299.44	chr15	-	3329	6	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	18	4	intron_retention	FALSE	canonical	3	16	junction_2	182.492301207476	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79816951	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.45	chr15	-	3064	6	NNC	ENSMUSG00000053411.17	novel	710	6	NA	NA	-5	4	intron_retention	FALSE	canonical	0	0	junction_5	181.477712130168	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79855325	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855185
ES.12299.46	chr15	-	3344	7	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	189.654730145775	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGGTTGTTTG	NA	False	NA	-3	True	ATTAAA	-28	NA	79816978	79800003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.47	chr15	-	2960	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	169.259826565222	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816960	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.48	chr15	-	5858	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-10	0	intron_retention	FALSE	canonical	2	4	junction_4	201.912456277467	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816979	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79805640_79807672_79807739_79809224_79809286_79814786_79814831_79816648
ES.12299.49	chr15	-	8622	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_5	204.698412304541	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855325	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79809224_79814831_79855185
ES.12299.5	chr15	-	6007	4	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-8	6	intron_retention	FALSE	canonical	3	258	junction_3	106.434121512897	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79855328	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.50	chr15	-	2865	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	166.514692616426	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855322	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069_79855146_79855227
ES.12299.51	chr15	-	7320	3	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	7081	0	intron_retention	FALSE	canonical	3	419	junction_1	35.5	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79809636	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79805640_79807672
ES.12299.52	chr15	-	3117	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	207.762217183223	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816841	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802675_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.53	chr15	-	5958	3	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	17	junction_2	236.5	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855329	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79805640_79807672_79807739_79855069
ES.12299.55	chr15	-	4369	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	174.032005357891	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79818044	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.56	chr15	-	3040	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.274577204441	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855325	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802222_79802357_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.57	chr15	-	3374	7	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_2	206.142076140597	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855329	79800007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803129_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.58	chr15	-	3267	6	NIC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	28	junction_5	213.227577953697	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79818034	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ES.12299.59	chr15	-	3131	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	17	junction_4	180.403021039006	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855325	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
ES.12299.6	chr15	-	4074	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-1169	-6	9	6	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818022	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.60	chr15	-	2916	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.897004295941	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855329	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807665_79807739_79855069
ES.12299.61	chr15	-	3379	6	NNC	ENSMUSG00000053411.17	novel	710	6	NA	NA	595	-1	intron_retention	FALSE	canonical	3	30	junction_5	170.387088712731	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816122	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79815662
ES.12299.62	chr15	-	5701	5	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	24	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	201.829754991676	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816816	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814827_79816576
ES.12299.64	chr15	-	3546	7	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	1	junction_2	205.919684990694	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855325	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803306_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.65	chr15	-	5352	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_5	202.834513828392	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855321	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79805640_79807672_79807739_79855069_79855146_79855240
ES.12299.66	chr15	-	3269	7	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	187.837474074442	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855329	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.67	chr15	-	3289	7	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	848	-1	intron_retention	FALSE	canonical	2	4	junction_5	208.586046726259	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79815869	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79809224_79809286_79814786_79814831_79815662
ES.12299.68	chr15	-	3178	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	181.31365089259	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855322	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802675_79802953_79803306_79805572_79805640_79807672_79807739_79855069
ES.12299.69	chr15	-	5467	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	62	junction_1	167.278689617058	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816839	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802440_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.7	chr15	-	3865	7	NNC	ENSMUSG00000053411.17	novel	3388	6	NA	NA	-1979	6	intron_retention	FALSE	canonical	0	0	junction_6	202.632192791658	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79820079	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648_79817143_79819913
ES.12299.70	chr15	-	3232	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	171.411217706297	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855329	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.71	chr15	-	3162	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	586	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	170.470916385562	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816131	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79815662
ES.12299.73	chr15	-	2900	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	165.714278872468	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855322	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.74	chr15	-	2863	6	NNC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	200.7300675036	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855329	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802523_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
ES.12299.75	chr15	-	3316	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-15	-1	intron_retention	FALSE	canonical	2	4	junction_5	186.295240590485	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816984	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79809224_79809286_79814786_79814831_79816648
ES.12299.76	chr15	-	2995	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	829	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.486996059624	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79815888	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79803460_79803537_79805572_79805640_79807672_79807739_79814786_79814831_79815662
ES.12299.77	chr15	-	2820	5	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	152.470283990029	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79855329	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79814786_79814831_79855069
ES.12299.78	chr15	-	3114	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	193.751682020349	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCTGTGTGTCTGGTT	NA	False	NA	-8	True	ATTAAA	-23	NA	79816977	79800008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803027_79803460_79803553_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.79	chr15	-	3471	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_6	171.712938747589	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTCTGTGTGTCTGGT	NA	False	NA	-9	True	ATTAAA	-22	NA	79818031	79800009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648_79817136_79817965
ES.12299.8	chr15	-	3134	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	212.378945111164	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818057	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802252_79802477_79802678_79802953_79803306_79803460_79803524_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ES.12299.80	chr15	-	6161	2	NNC	ENSMUSG00000053411.17	novel	6057	4	NA	NA	9098	1	intron_retention	FALSE	canonical	0	0	junction_1	0	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTCTGTGTGTCTGGT	NA	False	NA	-9	True	ATTAAA	-22	NA	79807619	79800009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79806146_79807594
ES.12299.81	chr15	-	3176	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-9	-2639	-8	0	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	False	NA	-10	True	ATTAAA	-21	NA	79855328	79800010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.82	chr15	-	2900	6	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	172.221485303083	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	False	NA	-10	True	ATTAAA	-21	NA	79855322	79800010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
ES.12299.83	chr15	-	2464	8	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.766508546923	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGACTTCTGTGTGTCTG	NA	False	NA	-11	True	ATTAAA	-20	NA	79855325	79800011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79801601_79802119_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.86	chr15	-	2967	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.274577204441	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGACTTCTGTGTGTC	NA	False	NA	-13	True	ATTAAA	-18	NA	79855324	79800013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802276_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.88	chr15	-	1761	6	NNC	ENSMUSG00000053411.17	novel	710	6	NA	NA	738	827	intron_retention	FALSE	canonical	3	30	junction_5	170.387088712731	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGGTCCTGATTTGG	NA	False	NA	NA	False	NA	NA	NA	79815979	79801483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79815662
ES.12299.89	chr15	-	1556	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	18	827	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.712938747589	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGGTCCTGATTTGG	NA	False	NA	NA	False	NA	NA	NA	79816951	79801483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802250_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.9	chr15	-	4342	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-1323	-2309	-33	6	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGGTTGTTTGTT	NA	False	NA	-1	True	ATTAAA	-30	NA	79818064	79800001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.90	chr15	-	4248	5	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	-8	826	intron_retention	FALSE	canonical	3	258	junction_4	92.290302849216	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTCCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	79855328	79801484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.91	chr15	-	1409	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	13	1477	0	826	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTCCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	79816840	79801484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.92	chr15	-	1470	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-2	826	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTCCTGATTTG	NA	False	NA	NA	False	NA	NA	NA	79855322	79801484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.93	chr15	-	1725	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-191	-824	37	824	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTGTGGTCCTGATT	NA	False	NA	NA	False	NA	NA	NA	79816932	79801486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ES.12299.94	chr15	-	1657	5	NIC	ENSMUSG00000053411.17	novel	528	6	NA	NA	-9	824	intron_retention	FALSE	canonical	3	17	junction_4	180.403021039006	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTGTGGTCCTGATT	NA	False	NA	NA	False	NA	NA	NA	79855329	79801486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
ES.12299.95	chr15	-	1694	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-6	-1160	-5	821	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAAGTGTGTGGTCCTG	NA	False	NA	NA	False	NA	NA	NA	79855325	79801489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ES.12299.96	chr15	-	2673	7	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	2	820	intron_retention	FALSE	canonical	1	2	junction_2	204.062422366839	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACAAGTGTGTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	79855317	79801490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79802678_79802953_79803954_79805572_79805640_79807672_79807739_79809224_79809286_79814786_79814831_79855069
ES.12299.97	chr15	-	176	1	Intergenic	novelGene_10276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	4346	False	NA	NA	False	NA	NA	NA	79829993	79829817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79829800_79830000
ES.12299.98	chr15	-	3334	1	Intergenic	novelGene_10277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCCAAACAGCCTGAAG	NA	False	NA	NA	False	NA	NA	NA	79838011	79834677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79834700_79838000
ES.12299.99	chr15	-	7604	1	Genic_Genomic	ENSMUSG00000053411.17	novel	NA	NA	NA	NA	-2	-32970	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCTTACGCACAGCCC	NA	False	NA	NA	False	NA	NA	NA	79855322	79847718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_79847700_79855300
ES.123.1	chr1	+	178	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	13586271	13586449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_13586300_13586400
ES.1230.15	chr1	-	2716	12	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_4	736.182817305503	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363428	125320645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331119_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.18	chr1	-	2530	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	884.498241314752	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363440	125320645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325184_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.19	chr1	-	3934	12	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	734.723706994565	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363282	125320645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125332207_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.2	chr1	-	2613	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	-58	-1	-58	1	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTTTTCTTCGTGCA	NA	False	NA	-2	True	AATAAA	-22	NA	125363522	125320640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.21	chr1	-	4969	11	NIC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	31	-3	intron_retention	FALSE	canonical	3	2308	junction_5	129.662677744986	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGATGGTTTTTCTTC	NA	False	NA	-7	True	AATAAA	-17	NA	125363413	125320645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.24	chr1	-	1188	1	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	3515	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1442	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125321834	125320646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125320600_125321800
ES.1230.26	chr1	-	5167	12	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	10	-4	intron_retention	FALSE	canonical	3	364	junction_11	630.625702663239	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363434	125320646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.28	chr1	-	2626	14	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1020.0395513854	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363439	125320646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125332207_125332310_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.29	chr1	-	2474	11	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1005.46635945714	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGATGGTTTTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	125363284	125320646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325248_125331129_125331304_125333581_125333726_125335028_125335180_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.32	chr1	-	2546	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_12	696.362747703299	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125363439	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363362
ES.1230.34	chr1	-	2534	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	1	57	junction_2	867.728548183897	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125363457	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322883_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.35	chr1	-	2498	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	880.466018493742	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125363440	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336328_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.36	chr1	-	2666	13	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	705.897183259243	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125363439	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363315_125363362
ES.1230.37	chr1	-	2401	12	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	-123490	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	735.103242313285	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125486954	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125486849
ES.1230.4	chr1	-	5746	4	FSM	ENSMUSG00000026341.17	ENSMUST00000186008.7	978	4	-4190	-578	-3486	0	multi-exon	FALSE	canonical	3	2430	junction_3	72.1433757642839	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125329539	125320642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188
ES.1230.40	chr1	-	2282	11	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1148.17999024543	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	125363430	125320648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322806_125322889_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363185_125363386
ES.1230.43	chr1	-	2474	14	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	853.405991883259	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTTCCTGATGGTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	125363439	125320649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125320853_125320899_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.44	chr1	-	2508	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	880.667202876445	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGAATTACCCTTCCT	NA	False	NA	-21	True	AATAAA	-3	NA	125363439	125320659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336346_125338996_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.45	chr1	-	2419	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-45	191	-45	-191	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGAGTGCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	125363329	125320833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.46	chr1	-	2411	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	-180	334	0	244	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTCAGGCTCTTTGA	NA	False	NA	-1	True	AATAAA	-22	NA	125363464	125320976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.47	chr1	-	2215	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	3	336	3	243	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTTCAGGCTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	125363461	125320977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.48	chr1	-	5956	10	NIC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	14	242	intron_retention	FALSE	canonical	3	2383	junction_7	114.753627662608	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCAGGCTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	125363430	125320978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.50	chr1	-	2032	9	NIC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	-79	241	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	1068.70779887442	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363363	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125363021
ES.1230.53	chr1	-	2099	11	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	23	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1000.69425900222	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363261	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125339000_125339112_125343992_125344118_125345985_125346042_125363031
ES.1230.54	chr1	-	2119	14	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	-7	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	853.405991883259	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363451	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321340_125321423_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.56	chr1	-	4638	11	NIC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	28	241	intron_retention	FALSE	canonical	3	2308	junction_5	129.662677744986	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363416	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.58	chr1	-	2211	12	NNC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	-8	241	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	733.246736685206	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363292	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336328_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.59	chr1	-	2275	14	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	0	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1024.00956911209	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTGTTTCAGGCTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	125363444	125320979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125339447_125339527_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.64	chr1	-	2008	10	NIC	ENSMUSG00000026341.17	novel	2565	12	NA	NA	0	240	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	775.685073553264	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACTTGTTTCAGGCTCT	NA	False	NA	-5	True	AATAAA	-18	NA	125363284	125320980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_125321828_125322804_125322889_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.65	chr1	-	2085	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	25	444	5	135	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAATTCTGTAGAGTCG	NA	False	NA	NA	False	TTTAAA	-26	NA	125363439	125321085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.1230.66	chr1	-	1579	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	123	863	4	121	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTTGCCCTGATATT	NA	False	NA	NA	False	AAAAAG	-15	NA	125363161	125321505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.67	chr1	-	2274	7	ISM	ENSMUSG00000026341.17	ENSMUST00000188497.7	856	8	215	-1441	-31	1422	3prime_fragment	FALSE	canonical	3	2308	junction_1	155.320546684018	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	125363249	125332175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ES.1230.68	chr1	-	4987	2	Antisense	novelGene_ENSMUSG00000102063.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGATTTTTTAATTTT	NA	False	NA	NA	False	AATAAA	-39	NA	125486965	125364257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_125369129_125486849
ES.1230.69	chr1	-	633	4	Antisense	novelGene_ENSMUSG00000102063.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGAGCATAACCTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	125486960	125364278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_125364485_125368933_125369129_125392480_125392602_125486849
ES.1230.70	chr1	-	7677	1	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATTTCGGGGCTAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	125479555	125471878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_125471900_125479600
ES.1230.9	chr1	-	5103	13	NNC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	884.330097996343	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGATGGTTTTTCTTCG	NA	False	NA	-6	True	AATAAA	-18	NA	125363439	125320644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125327009_125330279_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ES.12300.1	chr15	+	4935	3	Intergenic	novelGene_10278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTCTTTCGACCAG	9569	False	NA	NA	False	NA	NA	NA	79856596	79878349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79856837_79873451_79873947_79874149
ES.12300.2	chr15	+	5104	2	Intergenic	novelGene_10279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTCTTTCGACCAG	9603	False	NA	NA	False	NA	NA	NA	79856630	79878349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79856837_79873451
ES.12300.3	chr15	+	6905	2	Antisense	novelGene_ENSMUSG00000000489.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCCAAAAATATAATCAC	9607	False	NA	NA	False	AATAAA	-27	NA	79856634	79880154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_79856837_79873451
ES.12300.4	chr15	+	4291	3	Intergenic	novelGene_10280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTCTTTCGACCAG	9607	False	NA	NA	False	NA	NA	NA	79856634	79878349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79856837_79873451_79873597_79874405
ES.12300.5	chr15	+	135	1	Intergenic	novelGene_10281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGGCCGGCTTGGCG	9611	False	NA	NA	False	NA	NA	NA	79856638	79856773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79856600_79856800
ES.12301.1	chr15	-	2368	1	Intergenic	novelGene_10282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79876346	79873978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_79874000_79876300
ES.12302.1	chr15	-	3151	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	-207	0	-38	0	multi-exon	TRUE	canonical	2	5	junction_6	4.63381292481928	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	AAAAAG	-14	NA	79899216	79880074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
ES.12302.2	chr15	-	2171	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	214	-26	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	4.63381292481928	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGCCACAAA	NA	False	NA	NA	False	TTTAAA	-36	NA	79897190	79880100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897064
ES.12303.1	chr15	+	4625	1	Intergenic	novelGene_10283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTTATCTTTTGA	242	False	NA	NA	False	AATAAA	-17	NA	79900622	79905247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79900600_79905200
ES.12304.1	chr15	+	173	1	Intergenic	novelGene_10284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAGAAGT	1052	False	NA	NA	False	NA	NA	NA	79914062	79914235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_79914100_79914200
ES.12305.1	chr15	+	1073	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-255	1	-255	-1	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTGTGGATT	NA	False	NA	17	True	NA	NA	NA	79975279	79997641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ES.12305.10	chr15	+	2801	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	9	-570	-1	570	intron_retention	FALSE	canonical	3	1267	junction_2	89	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCATTCATTCCTTG	NA	False	NA	15	True	NA	NA	NA	79975543	79998212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79975694_79994644_79994883_79995799
ES.12305.11	chr15	+	4258	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	9	-1110	-1	1110	intron_retention	FALSE	canonical	3	1445	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAATTGTAATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79975543	79998752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79975694_79994644
ES.12305.13	chr15	+	1372	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	13	-566	3	566	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTCATTCATTCATTC	NA	False	NA	11	True	NA	NA	NA	79975547	79998208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ES.12305.14	chr15	+	735	4	NNC	ENSMUSG00000022415.13	novel	819	4	NA	NA	5	7396	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	642.40502972986	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATATTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	79975549	80011098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79994644_79994883_79995799_79995946_80010891
ES.12305.15	chr15	+	3429	13	Fusion	ENSMUSG00000022414.9_ENSMUSG00000022415.13	novel	819	4	NA	NA	20	14	multi-exon	FALSE	canonical	0	0	junction_3	485.674073382094	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTAACTTAAGCACCC	NA	False	NA	29	True	AGTAAA	-15	NA	79975564	80045922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_79975694_79994644_79994883_79995799_79995946_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.16	chr15	+	924	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	24	3232	24	4	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGGTGGGGAGTGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	79975568	80000470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
ES.12305.17	chr15	+	4672	2	Fusion	ENSMUSG00000022415.13_ENSMUSG00000042428.7	novel	819	4	NA	NA	24	0	multi-exon	FALSE	canonical	0	0	junction_1	0	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGCTGTGTGTG	NA	False	NA	18	True	AATAAA	-19	NA	79975568	80099720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_79975694_80095173
ES.12305.18	chr15	+	773	4	NNC	ENSMUSG00000022415.13	novel	819	4	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	639.594837030096	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975568	79997640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79994644_79994883_79995799_79995946_79997376
ES.12305.19	chr15	+	3726	5	NNC	ENSMUSG00000022415.13	novel	4180	4	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	671.831963737957	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGTGGGCTGTGTCAC	NA	False	NA	14	True	AATAAA	-14	NA	79975568	80003696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055_80000268_80000691
ES.12305.2	chr15	+	4454	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	-242	-32	-232	32	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAAGTGTGGCTTCAG	NA	False	NA	52	True	NA	NA	NA	79975302	80003734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
ES.12305.20	chr15	+	1795	4	NNC	ENSMUSG00000022415.13	novel	819	4	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	643.341796144683	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTTGTGCCTGTGTG	NA	False	NA	13	True	NA	NA	NA	79975570	79997637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79994644_79994883_79995799_79995946_79996349
ES.12305.21	chr15	+	725	4	NNC	ENSMUSG00000022415.13	novel	819	4	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	654.950888744085	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTATTTTGTGCCTGT	NA	False	NA	10	True	NA	NA	NA	79975570	79997634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79994644_79994883_79995849_79995946_79997366
ES.12305.22	chr15	+	4245	5	NNC	ENSMUSG00000022415.13	novel	4180	4	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	543.496550127045	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGTGTCACTGTGTT	NA	False	NA	20	True	AATAAA	-20	NA	79975576	80003702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79975694_79992300_79992398_79994644_79994883_79995799_79995946_80000055
ES.12305.23	chr15	+	3772	2	NNC	ENSMUSG00000022415.13	novel	4180	4	NA	NA	-3866	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGGGCTGTGTCACTG	NA	False	NA	16	True	AATAAA	-16	NA	79995807	80003698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_79995946_80000064
ES.12305.24	chr15	+	2744	1	Genic_Genomic	ENSMUSG00000022415.13	novel	NA	NA	NA	NA	2287	1002	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTTTTGTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	80001960	80004704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_80002000_80004700
ES.12305.25	chr15	+	2410	1	Genic_Genomic	ENSMUSG00000022415.13	novel	NA	NA	NA	NA	3444	1825	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGAATCGGACTCGGT	NA	False	NA	NA	False	NA	NA	NA	80003117	80005527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_80003100_80005500
ES.12305.26	chr15	+	171	2	Intergenic	novelGene_10286	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACAATAGT	NA	False	NA	NA	False	NA	NA	NA	80005617	80081387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80005665_80081263
ES.12305.27	chr15	+	181	1	Intergenic	novelGene_10287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	80006427	80006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80006400_80006600
ES.12305.28	chr15	+	440	2	Intergenic	novelGene_10288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGTGGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	80009024	80012737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80009098_80012370
ES.12305.29	chr15	+	189	1	Intergenic	novelGene_10289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAAGATTAATTTTA	NA	False	NA	NA	False	NA	NA	NA	80011120	80011309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80011100_80011300
ES.12305.30	chr15	+	2998	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	-13	-21	-13	21	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAAGCACCCAAAAGGT	4980	False	NA	36	True	AGTAAA	-22	NA	80017314	80045929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.32	chr15	+	3885	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	51	junction_3	7.64651134848233	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	4993	False	NA	12	True	AATAGA	-20	NA	80017327	80045905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80043109_80044274
ES.12305.33	chr15	+	4225	9	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	54	junction_1	6.76387462923434	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	4993	False	NA	12	True	AATAGA	-20	NA	80017327	80045905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80017390_80032427_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.34	chr15	+	3895	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	7	-3	intron_retention	FALSE	canonical	3	54	junction_1	6.47120879047157	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	5000	False	NA	12	True	AATAGA	-20	NA	80017334	80045905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80017390_80032427_80032565_80032887_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.35	chr15	+	3023	11	NNC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	19.0496719131853	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	5000	False	NA	15	True	AGTAAA	-1	NA	80017334	80045908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80017390_80032427_80032565_80032887_80033042_80033916_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.36	chr15	+	5908	9	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	8	15	intron_retention	FALSE	canonical	3	51	junction_3	8.0068330193654	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTAACTTAAGCACCCA	5001	False	NA	30	True	AGTAAA	-16	NA	80017335	80045923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80040103_80041804_80043109_80044274
ES.12305.37	chr15	+	2944	11	NNC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	18.3654567054566	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATGTCATCTTGTCTA	5003	False	NA	11	True	AATAGA	-19	NA	80017337	80045904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037838_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.38	chr15	+	2988	12	NNC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.7508533829508	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	5003	False	NA	15	True	AGTAAA	-1	NA	80017337	80045908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80017390_80023865_80023992_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80043043_80043109_80044274
ES.12305.39	chr15	+	3269	10	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	13	-5	intron_retention	FALSE	canonical	3	51	junction_2	7.6594168620507	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGTCATCTTGTCT	5006	False	NA	10	True	AATAGA	-18	NA	80017340	80045903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80017390_80032427_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.4	chr15	+	3291	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-135	1	-135	-1	intron_retention	FALSE	canonical	3	1445	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTGTGGATT	NA	False	NA	17	True	NA	NA	NA	79975399	79997641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79975694_79994644
ES.12305.40	chr15	+	3196	12	NNC	ENSMUSG00000022414.9	novel	504	2	NA	NA	299	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.4087249932995	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCATCTTGTCTAT	5322	False	NA	12	True	AATAGA	-20	NA	80017656	80045905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80017824_80027657_80027788_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.41	chr15	+	5463	9	NIC	ENSMUSG00000022414.9	novel	2964	11	NA	NA	12827	-5	intron_retention	FALSE	canonical	3	51	junction_1	7.38981562692873	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGTCATCTTGTCT	5697	False	NA	10	True	AATAGA	-18	NA	80030184	80045903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ES.12305.42	chr15	+	4653	2	NNC	ENSMUSG00000042428.7	novel	4665	2	NA	NA	-2122	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGTGTGTGCTGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	80055799	80099719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80055907_80095173
ES.12305.43	chr15	+	4957	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	-292	0	-292	0	multi-exon	FALSE	canonical	3	32	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGCTGTGTGTG	NA	False	NA	18	True	AATAAA	-19	NA	80057629	80099720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80058040_80095173
ES.12305.44	chr15	+	174	1	Intergenic	novelGene_10293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACAATAGT	NA	False	NA	NA	False	NA	NA	NA	80081213	80081387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80081200_80081400
ES.12305.45	chr15	+	4548	1	NIC	ENSMUSG00000042428.7	novel	4665	2	NA	NA	37251	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGCTGTGTGTG	3817	False	NA	18	True	AATAAA	-19	NA	80095172	80099720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80095200_80099700
ES.12305.5	chr15	+	3780	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-48	-575	-48	575	intron_retention	FALSE	canonical	3	1445	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCATTCCTTGAGTGA	NA	False	NA	20	True	NA	NA	NA	79975486	79998217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79975694_79994644
ES.12305.6	chr15	+	4002	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	-34	212	-24	-212	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGAGTGTGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	79975510	80003490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
ES.12305.7	chr15	+	5099	3	NIC	ENSMUSG00000022415.13	novel	4180	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	37	junction_2	704	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGTGTCACTGTGT	NA	False	NA	19	True	AATAAA	-19	NA	79975541	80003701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79975694_79994644_79995946_80000055
ES.12305.8	chr15	+	1816	2	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	9	1332	-1	447	intron_retention	FALSE	canonical	3	1445	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCGCAATGTACTTGTT	NA	False	NA	NA	False	GGGGCT	-5	NA	79975543	79996310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_79975694_79994644
ES.12305.9	chr15	+	1725	3	NIC	ENSMUSG00000022415.13	novel	819	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1362	junction_2	41.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGCCTGTGTGGAT	NA	False	NA	16	True	NA	NA	NA	79975543	79997640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_79975694_79994644_79995946_79997366
ES.12306.1	chr15	-	1464	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	54	-167	1	167	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCCGGCTCCACATTTCT	3572	False	NA	NA	False	NA	NA	NA	79967553	79961824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.10	chr15	-	1381	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	-34	4	-34	0	multi-exon	FALSE	canonical	3	16287	junction_9	4874.04926341766	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3484	False	NA	-5	True	AATAAA	-13	NA	79967641	79961995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.12	chr15	-	3775	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_4	5903.99849678165	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.13	chr15	-	2988	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	16287	junction_6	5334.38130589356	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3580	False	NA	-6	True	AATAAA	-12	NA	79967545	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79966784_79967524
ES.12306.15	chr15	-	1559	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	16	-1	intron_retention	FALSE	canonical	3	26994	junction_1	2023.25251760624	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	6459	False	NA	-6	True	AATAAA	-12	NA	79964666	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964052_79964566
ES.12306.16	chr15	-	2868	8	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_5	10952.1795966998	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.17	chr15	-	1875	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	1	1	1	-1	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.18	chr15	-	1285	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	9821.10715390047	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966597_79966784_79967524
ES.12306.20	chr15	-	2614	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_6	5508.34496216624	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.21	chr15	-	1363	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	2	764	junction_9	9382.12445077748	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3482	False	NA	-6	True	AATAAA	-12	NA	79967643	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966765_79967524
ES.12306.23	chr15	-	4473	3	Fusion	ENSMUSG00000060036.15_ENSMUSG00000077734.3	novel	824	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_2	6197.5	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79964754_79965096_79966784_79967524
ES.12306.24	chr15	-	1564	9	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_6	10488.1098481805	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.25	chr15	-	2390	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5307.90272968101	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.26	chr15	-	1269	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10100.5659039604	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963005_79963908_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.27	chr15	-	1284	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_9	9476.19179253401	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966776_79967524
ES.12306.29	chr15	-	3495	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_5	5866.15204030717	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.3	chr15	-	1479	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCCACATTTCTTTTT	3572	False	NA	1	True	AATAAA	-19	NA	79967553	79961989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.30	chr15	-	3175	5	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	5	-1	intron_retention	FALSE	canonical	1	4	junction_4	13877.5372725134	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3576	False	NA	-6	True	AATAAA	-12	NA	79967549	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096_79965413_79965815_79965985_79967524
ES.12306.33	chr15	-	1817	9	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	214	junction_6	10417.3929890112	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3570	False	NA	-6	True	AATAAA	-12	NA	79967555	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.37	chr15	-	3894	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_4	6227.21025018427	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79965985_79966590_79966784_79967524
ES.12306.38	chr15	-	4500	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_3	6182.6780784885	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79966784_79967524
ES.12306.39	chr15	-	1282	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9792.74470030911	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3574	False	NA	-6	True	AATAAA	-12	NA	79967551	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962620_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.4	chr15	-	5563	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-400	-5055	-400	5055	mono-exon	FALSE	NA	NA	NA	NA	NA	1276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3570	False	NA	-2	True	AATAAA	-16	NA	79967555	79961992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79962000_79967600
ES.12306.40	chr15	-	3133	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	23824	junction_4	3039.86032665245	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3570	False	NA	-6	True	AATAAA	-12	NA	79967555	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590
ES.12306.41	chr15	-	1383	10	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	198	-1	combination_of_known_junctions	FALSE	canonical	1	109	junction_9	9580.32615362737	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	NA	False	NA	-6	True	AATAAA	-12	NA	79975871	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79975751
ES.12306.42	chr15	-	2413	8	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5075.85542403586	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965233_79965815_79966784_79967524
ES.12306.43	chr15	-	4444	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_3	6694.28723282438	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79966784_79967524
ES.12306.44	chr15	-	5122	3	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	26994	junction_1	844	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096
ES.12306.46	chr15	-	1360	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	95	junction_8	12132.2134922784	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966702_79966784_79967524
ES.12306.48	chr15	-	1284	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9896.82080266183	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964574_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.49	chr15	-	2150	8	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_7	5367.44090962978	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.5	chr15	-	4846	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	26994	junction_1	2256.46586994402	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3572	False	NA	-2	True	AATAAA	-16	NA	79967553	79961992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79964754_79965096
ES.12306.50	chr15	-	3877	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_5	5692.70192439407	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964754_79965096_79966784_79967524
ES.12306.51	chr15	-	796	7	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11172.9055258195	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962279_79964674_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.52	chr15	-	2733	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_6	5701.20650973692	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79965985_79966590_79966784_79967524
ES.12306.53	chr15	-	4101	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_4	5987.48955635832	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79964754_79965096_79966784_79967524
ES.12306.54	chr15	-	2957	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_5	5956.2247573442	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79965985_79966590_79966784_79967524
ES.12306.55	chr15	-	1987	9	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_6	10244.8949482169	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.56	chr15	-	3582	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	1	4	junction_3	13139.1574564987	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096_79965985_79967524
ES.12306.57	chr15	-	3092	7	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_4	11422.4859767429	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.58	chr15	-	4516	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	26994	junction_1	2112.87991981455	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096_79965985_79966590
ES.12306.59	chr15	-	4210	3	Fusion	ENSMUSG00000060036.15_ENSMUSG00000077734.3	novel	824	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16287	junction_2	7894	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3572	False	NA	-6	True	AATAAA	-12	NA	79967553	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79965985_79966590_79966784_79967524
ES.12306.6	chr15	-	3266	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	16287	junction_5	5663.70950526243	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3570	False	NA	-2	True	AATAAA	-16	NA	79967555	79961992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.60	chr15	-	4953	2	Fusion	ENSMUSG00000060036.15_ENSMUSG00000077734.3	novel	816	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	32075	junction_1	0	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTTTTCCCACATT	3570	False	NA	-6	True	AATAAA	-12	NA	79967555	79961996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79965985_79966590
ES.12306.61	chr15	-	2210	8	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	214	junction_5	10581.5399616116	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.62	chr15	-	1270	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9979.59910993732	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3570	False	NA	-7	True	AATAAA	-11	NA	79967555	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965220_79965825_79965985_79966590_79966784_79967524
ES.12306.63	chr15	-	2217	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16287	junction_7	5464.87566189753	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79965985_79966590_79966784_79967524
ES.12306.64	chr15	-	516	5	Fusion	ENSMUSG00000060036.15_ENSMUSG00000064884.3	novel	1781	8	NA	NA	1	-2	multi-exon	FALSE	non_canonical	0	0	junction_4	13183.1568582794	1276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	NA	False	NA	-7	True	AATAAA	-11	NA	79972753	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79972653
ES.12306.65	chr15	-	4815	2	FSM	ENSMUSG00000060036.15_ENSMUSG00000077734.3	ENSMUST00000185928.2	614	2	-15	-4186	1	-2	multi-exon	FALSE	canonical	3	16287	junction_1	0	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79966784_79967524
ES.12306.68	chr15	-	4723	3	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16287	junction_2	5353.5	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79966784_79967524
ES.12306.69	chr15	-	4380	4	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16287	junction_3	5488.62680660857	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79964754_79965096_79966784_79967524
ES.12306.7	chr15	-	5220	2	ISM	ENSMUSG00000060036.15_ENSMUSG00000077734.3	ENSMUST00000187832.7	824	5	-21	-2625	-1	-1	intron_retention	FALSE	canonical	3	28682	junction_1	0	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCCACATTTCTT	3570	False	NA	-2	True	AATAAA	-16	NA	79967555	79961992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_79964754_79965096
ES.12306.70	chr15	-	3338	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16287	junction_5	5746.41584294071	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79966784_79967524
ES.12306.71	chr15	-	1281	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	117	junction_5	9864.57571312624	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964042_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.72	chr15	-	1230	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10100.5659039604	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79962957_79963898_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.77	chr15	-	4537	3	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	16287	junction_2	8054.5	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3570	False	NA	-7	True	AATAAA	-11	NA	79967555	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962628_79962907_79966784_79967524
ES.12306.78	chr15	-	4989	3	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	28682	junction_2	1117	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962308_79962531_79964754_79965096
ES.12306.79	chr15	-	3866	4	Fusion	ENSMUSG00000060036.15_ENSMUSG00000077734.3	novel	824	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16287	junction_3	6785.68278722848	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3572	False	NA	-7	True	AATAAA	-11	NA	79967553	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.8	chr15	-	3273	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	16287	junction_6	5523.20271420688	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTTTTCCCACATTTC	3572	False	NA	-4	True	AATAAA	-14	NA	79967553	79961994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.80	chr15	-	4158	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	16287	junction_4	5620.86347347985	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTTTTCCCACAT	3570	False	NA	-7	True	AATAAA	-11	NA	79967555	79961997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962308_79962531_79964754_79965096_79966784_79967524
ES.12306.82	chr15	-	2894	6	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	16287	junction_5	5352.56800423871	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACACTGGTTTTCCCACA	3570	False	NA	-8	True	AATAAA	-10	NA	79967555	79961998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.84	chr15	-	1251	10	NNC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9792.74470030911	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCACACTGGTTTTCCC	3572	False	NA	-11	True	AATAAA	-7	NA	79967553	79962001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_79962096_79962187_79962308_79962531_79962611_79962926_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12306.86	chr15	-	4316	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-400	-3808	-400	3808	mono-exon	FALSE	NA	NA	NA	NA	NA	1267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3570	False	NA	NA	False	NA	NA	NA	79967555	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79963200_79967600
ES.12306.88	chr15	-	2624	4	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	1	1212	intron_retention	FALSE	canonical	3	16287	junction_3	6785.68278722848	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79964754_79965096_79965985_79966590_79966784_79967524
ES.12306.89	chr15	-	2969	3	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	-1	1212	intron_retention	FALSE	canonical	3	16287	junction_2	7894	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3570	False	NA	NA	False	NA	NA	NA	79967555	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79965985_79966590_79966784_79967524
ES.12306.9	chr15	-	3840	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	16287	junction_4	6512.01716060392	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTTTTCCCACATTTC	3572	False	NA	-4	True	AATAAA	-14	NA	79967553	79961994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79962096_79962187_79962628_79962907_79965985_79966590_79966784_79967524
ES.12306.90	chr15	-	3573	2	FSM	ENSMUSG00000060036.15_ENSMUSG00002075255.1	ENSMUST00000185928.2	614	2	-15	-2944	1	1212	multi-exon	FALSE	canonical	3	16287	junction_1	0	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_79966784_79967524
ES.12306.91	chr15	-	3232	3	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	-1	1212	intron_retention	FALSE	canonical	3	16287	junction_2	6197.5	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3570	False	NA	NA	False	NA	NA	NA	79967555	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79964754_79965096_79966784_79967524
ES.12306.92	chr15	-	3365	3	Fusion	ENSMUSG00000060036.15_ENSMUSG00002075255.1	novel	824	5	NA	NA	1	1212	intron_retention	FALSE	canonical	3	28682	junction_1	1696.5	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTGGTAACTGTAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_79964754_79965096_79965985_79966590
ES.12306.93	chr15	-	1680	6	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1270	combination_of_known_junctions	FALSE	canonical	3	214	junction_3	12134.432815752	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
ES.12306.94	chr15	-	2015	5	NIC	ENSMUSG00000060036.15	novel	1351	10	NA	NA	1	-1270	intron_retention	FALSE	canonical	3	16287	junction_4	6149.59447850019	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3572	False	NA	NA	False	NA	NA	NA	79967553	79963265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ES.12307.1	chr15	-	2216	2	Intergenic	novelGene_10285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGTGAAATCTCCTG	7145	False	NA	NA	False	NA	NA	NA	80007830	80005412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80006432_80006633
ES.12308.1	chr15	-	1107	1	Antisense	novelGene_ENSMUSG00000022414.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATTTGTGTATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	80017560	80016453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80016500_80017600
ES.12309.1	chr15	-	6733	5	Antisense	novelGene_ENSMUSG00000022414.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGGTACGTAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	80048425	80035961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80036976_80037825_80037943_80039955_80040098_80041799_80043109_80044274
ES.12309.2	chr15	-	1749	2	Antisense	novelGene_ENSMUSG00000022414.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGGGAAGCCTTGAACA	NA	False	NA	NA	False	NA	NA	NA	80043632	80040959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80042025_80042948
ES.12309.3	chr15	-	7466	1	Antisense	novelGene_ENSMUSG00000022414.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGGGAAGCCTTGAACA	NA	False	NA	NA	False	NA	NA	NA	80048425	80040959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80041000_80048400
ES.12309.4	chr15	-	668	4	Intergenic	novelGene_10290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCAGTGCCTGGCCAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	80056210	80047355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80047719_80051952_80052070_80052203_80052325_80056143
ES.12309.5	chr15	-	176	1	Intergenic	novelGene_10291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80053201	80053025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80053000_80053200
ES.1231.1	chr1	+	2769	16	NIC	ENSMUSG00000026342.11	novel	756	6	NA	NA	-59	23	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	24.987107786928	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTGTCCTATCATT	NA	False	NA	NA	False	NA	NA	NA	125488272	125523580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_125488555_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.2	chr1	+	2818	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-62	-23	-62	23	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTGTCCTATCATT	NA	False	NA	NA	False	NA	NA	NA	125488690	125523580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.3	chr1	+	2653	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	-13	93	-13	-93	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTGCTGCTTCCT	NA	False	NA	NA	False	TATAAA	-17	NA	125488739	125523464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.5	chr1	+	2700	16	NNC	ENSMUSG00000026342.11	novel	2733	16	NA	NA	14	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.5233627439372	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AGTAAA	-12	NA	125488766	125523522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494365_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.6	chr1	+	2781	16	NNC	ENSMUSG00000026342.11	novel	2733	16	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.883366993633	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	125488768	125523557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_125489086_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.7	chr1	+	2768	17	NNC	ENSMUSG00000026342.11	novel	2733	16	NA	NA	21	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0717210282986	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGGGTGCTGCTTCC	NA	False	NA	NA	False	TATAAA	-16	NA	125488773	125523463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_125489022_125489567_125489718_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ES.1231.8	chr1	+	2535	16	NIC	ENSMUSG00000026342.11	novel	2733	16	NA	NA	25	-145	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	28.1009292056726	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATTGAGTAATTTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	125488777	125523412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517575_125517703_125518769_125518867_125522649
ES.12310.1	chr15	-	178	1	Intergenic	novelGene_10292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTACTTGAT	NA	False	NA	NA	False	NA	NA	NA	80062918	80062740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80062700_80062900
ES.12311.1	chr15	-	210	1	Intergenic	novelGene_10294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAGCTCCAGA	9373	False	NA	NA	False	NA	NA	NA	80089557	80089347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80089300_80089600
ES.12312.1	chr15	+	171	1	Intergenic	novelGene_10295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	3799	False	NA	NA	False	NA	NA	NA	80114264	80114435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80114300_80114400
ES.12313.1	chr15	-	163	1	Intergenic	novelGene_10296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	80116296	80116133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80116100_80116300
ES.12314.1	chr15	+	4711	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	-136	588	-74	-25	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCATCTCCTACTCCACT	2679	False	NA	NA	False	AATAAA	-22	NA	80118144	80136962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.10	chr15	+	3645	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	-19	1522	-19	-937	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTGCTAAGTTGGAC	2734	False	NA	NA	False	AATAAA	-21	NA	80118199	80136050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.11	chr15	+	5078	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-99	-585	-16	0	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2737	False	NA	16	True	AATAAA	-18	NA	80118202	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.12	chr15	+	4500	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	6	-138	intron_retention	FALSE	canonical	3	9	junction_1	90.5423473666696	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGGTTCTTTGTTGC	2759	False	NA	7	True	AGTAAA	-22	NA	80118224	80136849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.13	chr15	+	5516	6	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	21	junction_1	84.6678215144337	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2762	False	NA	16	True	AATAAA	-18	NA	80118227	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.14	chr15	+	5357	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_7	102.284517151813	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2764	False	NA	16	True	AATAAA	-18	NA	80118229	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132701_80133529
ES.12314.15	chr15	+	2347	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	12	2789	12	17	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGATGTCACAGAAGAG	2765	False	NA	NA	False	AATGAA	-12	NA	80118230	80134783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.16	chr15	+	5219	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	12	2	intron_retention	FALSE	canonical	3	9	junction_1	90.5423473666696	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACGTGTCTATGTGGTAT	2765	False	NA	18	True	AATAAA	-20	NA	80118230	80137574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.18	chr15	+	4123	3	NNC	ENSMUSG00000022412.15	novel	419	3	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_2	4.5	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2765	False	NA	15	True	AATAAA	-17	NA	80118230	80137571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118365_80118882_80118982_80133681
ES.12314.19	chr15	+	4412	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	13	723	13	-138	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGGTTCTTTGTTGC	2766	False	NA	7	True	AGTAAA	-22	NA	80118231	80136849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.2	chr15	+	5686	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-61	1	intron_retention	FALSE	canonical	3	18	junction_1	87.9071479839192	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGTGTCTATGTGGTA	2692	False	NA	17	True	AATAAA	-19	NA	80118157	80137573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.20	chr15	+	4436	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-62	20	21	-20	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTACTCCACTGTAAT	2774	False	NA	NA	False	AATAAA	-27	NA	80118239	80136967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.21	chr15	+	5510	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	18	junction_1	92.8636994022243	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2781	False	NA	16	True	AATAAA	-18	NA	80118246	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.22	chr15	+	5101	6	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	30	1	intron_retention	FALSE	canonical	2	8	junction_1	89.8407479933243	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGTGTCTATGTGGTA	2783	False	NA	17	True	AATAAA	-19	NA	80118248	80137573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.23	chr15	+	4397	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-25	-142	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTTGGTTCTTTG	2790	False	NA	3	True	AGTAAA	-18	NA	80118255	80136845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.24	chr15	+	4758	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-10	-143	intron_retention	FALSE	canonical	3	18	junction_1	92.8636994022243	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATTTTTTGGTTCTTT	2805	False	NA	2	True	AGTAAA	-17	NA	80118270	80136844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.26	chr15	+	4983	6	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	-1	0	intron_retention	FALSE	canonical	2	8	junction_1	100.100749247945	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2814	False	NA	16	True	AATAAA	-18	NA	80118279	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.27	chr15	+	2128	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	62	2958	0	-152	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTTGGGTGTTTTG	2815	False	NA	NA	False	NA	NA	NA	80118280	80134614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.28	chr15	+	4584	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	0	-141	intron_retention	FALSE	canonical	3	4	junction_1	100.193282596944	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTTGGTTCTTTGT	2815	False	NA	4	True	AGTAAA	-19	NA	80118280	80136846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.29	chr15	+	5284	7	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	4	junction_3	99.0196389050621	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2816	False	NA	16	True	AATAAA	-18	NA	80118281	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80120005_80120355_80128719_80128919_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.3	chr15	+	5192	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	-39	-5	-39	5	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTCTATGTGGTATCAG	2714	False	NA	21	True	AATAAA	-23	NA	80118179	80137577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.30	chr15	+	5098	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2816	False	NA	16	True	AATAAA	-18	NA	80118281	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.31	chr15	+	8625	8	Fusion	ENSMUSG00000042406.9_ENSMUSG00000022412.15	novel	4097	8	NA	NA	3	5	intron_retention	FALSE	canonical	3	146	junction_1	507.636218775064	920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTTTCAGTGTCATTC	2818	False	NA	37	True	AATAAA	-25	NA	80118283	80141747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80139887_80140407_80140723_80140834
ES.12314.32	chr15	+	4479	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	65	604	3	-19	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTACTCCACTGTAATC	2818	False	NA	NA	False	AATAAA	-28	NA	80118283	80136968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.34	chr15	+	3207	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	66	1875	4	931	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCTTTCTTTATCTGT	2819	False	NA	NA	False	NA	NA	NA	80118284	80135697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.35	chr15	+	4486	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	4	-24	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCTCCTACTCCACTG	2819	False	NA	NA	False	AATAAA	-23	NA	80118284	80136963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.36	chr15	+	3913	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	66	1169	4	-584	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTGACTTTGGACTAT	2819	False	NA	NA	False	AATGAA	-22	NA	80118284	80136403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.37	chr15	+	4269	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-17	142	4	-142	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTTGGTTCTTTG	2819	False	NA	3	True	AGTAAA	-18	NA	80118284	80136845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.38	chr15	+	5611	7	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	2	junction_2	104.832670904107	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	2823	False	NA	11	True	AATAAA	-13	NA	80118288	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118760_80118882_80119044_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.39	chr15	+	5839	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-4	749	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCCTCGTGTTTTATGGT	2824	False	NA	NA	False	TATAAA	-15	NA	80118289	80138321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.4	chr15	+	5275	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	-90	-22	-28	0	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2725	False	NA	16	True	AATAAA	-18	NA	80118190	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.40	chr15	+	4824	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-4	-144	intron_retention	FALSE	canonical	3	18	junction_1	87.9071479839192	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTATTTTTTGGTTCTT	2824	False	NA	1	True	AGTAAA	-16	NA	80118289	80136843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.41	chr15	+	3655	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	13	1495	0	-932	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTAAGTTGGACTGAGT	2828	False	NA	NA	False	AATAAA	-26	NA	80118293	80136055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.42	chr15	+	5065	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	9	junction_1	94.9205808382285	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGACGTGTCTATGT	2828	False	NA	13	True	AATAAA	-15	NA	80118293	80137569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.43	chr15	+	4853	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	0	-25	intron_retention	FALSE	canonical	3	18	junction_1	92.8636994022243	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCATCTCCTACTCCACT	2828	False	NA	NA	False	AATAAA	-22	NA	80118293	80136962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.44	chr15	+	8801	6	NNC	ENSMUSG00000022412.15	novel	419	3	NA	NA	0	-3056	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	3.2	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAGACCAGCATCAT	2828	False	NA	NA	False	NA	NA	NA	80118293	80129449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118365_80120005_80121900_80122063_80124152_80124350_80125508_80125675_80126829_80127011
ES.12314.45	chr15	+	5825	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	75	-752	0	752	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGTGTTTTATGGTTGG	2828	False	NA	NA	False	TATAAA	-18	NA	80118293	80138324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.46	chr15	+	5666	6	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	-5	intron_retention	FALSE	canonical	3	82	junction_1	60.456926815709	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	2829	False	NA	11	True	AATAAA	-13	NA	80118294	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.47	chr15	+	4003	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	14	1146	1	-583	intron_retention	FALSE	canonical	3	52	junction_1	78.4488509936393	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGACTTTGGACTATG	2829	False	NA	NA	False	AATGAA	-23	NA	80118294	80136404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.48	chr15	+	6571	5	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	57	junction_3	85.8497961558442	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2829	False	NA	16	True	AATAAA	-18	NA	80118294	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118982_80120005_80120355_80130937_80132253_80132527_80132705_80133529
ES.12314.49	chr15	+	5182	7	NNC	ENSMUSG00000022412.15	novel	4394	6	NA	NA	1	-3	intron_retention	FALSE	canonical	1	4	junction_3	95.6637630221368	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGACGTGTCTATGT	2829	False	NA	13	True	AATAAA	-15	NA	80118294	80137569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80120005_80120355_80128719_80128919_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.5	chr15	+	5224	7	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_1	93.2237451868711	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2727	False	NA	16	True	AATAAA	-18	NA	80118192	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118334_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.50	chr15	+	5371	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	1	intron_retention	FALSE	canonical	1	4	junction_4	98.1826702361159	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGTGTCTATGTGGTA	2829	False	NA	17	True	AATAAA	-19	NA	80118294	80137573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118882_80118982_80120005_80120355_80128719_80128919_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.51	chr15	+	5734	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-7	-1333	1	748	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCCTCGTGTTTTATGG	2829	False	NA	NA	False	TATAAA	-14	NA	80118294	80138320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.52	chr15	+	2030	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	-6	2370	2	-149	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGTGTTTTGTTT	2830	False	NA	NA	False	NA	NA	NA	80118295	80134617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.54	chr15	+	4277	6	NIC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	2	-586	intron_retention	FALSE	canonical	3	21	junction_1	84.6678215144337	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTTGACTTTGGACT	2830	False	NA	NA	False	AATGAA	-20	NA	80118295	80136401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.55	chr15	+	2580	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	-154	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	87.9071479839192	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTTTGGGTGTTT	2837	False	NA	NA	False	NA	NA	NA	80118302	80134612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.56	chr15	+	4798	6	NIC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	2	-57	intron_retention	FALSE	canonical	3	21	junction_1	84.6678215144337	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAGAGAAAAAC	2838	False	NA	88	True	NA	NA	NA	80118303	80136930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.58	chr15	+	2652	6	NIC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	0	23	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	84.6678215144337	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACAGAAGAGTGATTG	2843	False	NA	NA	False	AATGAA	-18	NA	80118308	80134789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.59	chr15	+	2225	7	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	0	-152	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	103.67215955437	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTTGGGTGTTTTG	2843	False	NA	NA	False	NA	NA	NA	80118308	80134614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.6	chr15	+	5311	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-25	0	intron_retention	FALSE	canonical	3	4	junction_1	98.7803169685548	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2728	False	NA	16	True	AATAAA	-18	NA	80118193	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.61	chr15	+	5173	7	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	5	-5	intron_retention	FALSE	canonical	3	4	junction_1	103.67215955437	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	2848	False	NA	11	True	AATAAA	-13	NA	80118313	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.62	chr15	+	5157	7	NNC	ENSMUSG00000022412.15	novel	2712	7	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2	junction_1	104.170399933101	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACGTGTCTATGTG	2849	False	NA	14	True	AATAAA	-16	NA	80118314	80137570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118365_80118634_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.63	chr15	+	5208	7	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	6	-5	intron_retention	FALSE	canonical	1	2	junction_2	97.8138822231055	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	2849	False	NA	11	True	AATAAA	-13	NA	80118314	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118882_80119044_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.64	chr15	+	5091	7	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	4	junction_1	104.613176353013	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2849	False	NA	16	True	AATAAA	-18	NA	80118314	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.65	chr15	+	5564	5	NIC	ENSMUSG00000022412.15	novel	4394	6	NA	NA	8	751	intron_retention	FALSE	canonical	0	0	junction_2	93.473258207896	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCGTGTTTTATGGTTG	2851	False	NA	NA	False	TATAAA	-17	NA	80118316	80138323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80120005_80120355_80132074_80132253_80132527_80132705_80133529
ES.12314.66	chr15	+	4751	6	NNC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	-8	-4	intron_retention	FALSE	canonical	0	0	junction_1	93.0255878777447	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCTGACGTGTCTATG	2852	False	NA	12	True	AATAAA	-14	NA	80118317	80137568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118387_80120303_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.67	chr15	+	4474	7	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	1	-142	intron_retention	FALSE	canonical	1	2	junction_2	97.8138822231055	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTTGGTTCTTTG	2861	False	NA	3	True	AGTAAA	-18	NA	80118326	80136845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118882_80119044_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.68	chr15	+	2380	7	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	55	2728	10	56	5prime_fragment	FALSE	canonical	3	52	junction_1	78.4488509936393	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCTCTGCAGAGGAATAA	2870	False	NA	NA	False	NA	NA	NA	80118335	80134822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.7	chr15	+	5374	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-20	0	intron_retention	FALSE	canonical	1	2	junction_1	100.603079435158	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2733	False	NA	16	True	AATAAA	-18	NA	80118198	80137572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118365_80118634_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.70	chr15	+	6057	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	15	751	intron_retention	FALSE	canonical	1	4	junction_4	103.51673432694	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCGTGTTTTATGGTTG	2875	False	NA	NA	False	TATAAA	-17	NA	80118340	80138323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118365_80118882_80118982_80120005_80120355_80128719_80128919_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.71	chr15	+	2146	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	16	-154	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	90.5423473666696	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCCTTTGGGTGTTT	2876	False	NA	NA	False	NA	NA	NA	80118341	80134612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118365_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.72	chr15	+	4485	5	NIC	ENSMUSG00000022412.15	novel	5148	6	NA	NA	18	-142	intron_retention	FALSE	canonical	3	146	junction_1	39.0600499231632	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTTTGGTTCTTTG	2878	False	NA	3	True	AGTAAA	-18	NA	80118343	80136845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132705_80133529
ES.12314.73	chr15	+	5692	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	23	-1	intron_retention	FALSE	canonical	1	4	junction_4	102.240213343331	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACGTGTCTATGTGG	2883	False	NA	15	True	AATAAA	-17	NA	80118348	80137571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118760_80118882_80118982_80120005_80120355_80128719_80128919_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.74	chr15	+	6539	5	NIC	ENSMUSG00000022412.15	novel	4394	6	NA	NA	34	-5	intron_retention	FALSE	canonical	3	57	junction_3	77.0503082407851	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	2894	False	NA	11	True	AATAAA	-13	NA	80118359	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.75	chr15	+	3183	5	ISM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	630	2958	523	-152	3prime_fragment	FALSE	canonical	3	221	junction_2	9.9373034571759	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTTGGGTGTTTTG	3383	False	NA	NA	False	NA	NA	NA	80118848	80134614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.76	chr15	+	4982	5	ISM	ENSMUSG00000022412.15	ENSMUST00000229138.2	4097	8	1724	-19	1679	-3	intron_retention	FALSE	canonical	3	221	junction_2	9.9373034571759	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGACGTGTCTATGT	4539	False	NA	13	True	AATAAA	-15	NA	80120004	80137569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.77	chr15	+	5030	5	NNC	ENSMUSG00000022412.15	novel	485	2	NA	NA	-1795	1	intron_retention	FALSE	canonical	0	0	junction_1	100.514613365421	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACGTGTCTATGTGGTA	3480	False	NA	17	True	AATAAA	-19	NA	80130036	80137573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80130431_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12314.78	chr15	+	5194	2	FSM	ENSMUSG00000022412.15	ENSMUST00000228965.2	485	2	353	-5062	353	-5	multi-exon	FALSE	canonical	3	225	junction_1	0	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	5628	False	NA	11	True	AATAAA	-13	NA	80132184	80137567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80132253_80132441
ES.12314.79	chr15	+	1479	4	FSM	ENSMUSG00000042406.9	ENSMUST00000229828.2	659	4	-39	-781	-38	-1	multi-exon	FALSE	canonical	3	33	junction_1	614.772044473939	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATGTGGGTTTTCAGTG	4107	False	NA	31	True	AATAAA	-19	NA	80139346	80141741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80139486_80139768_80139887_80140407_80140723_80140834
ES.12314.8	chr15	+	4009	7	NIC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-19	-586	intron_retention	FALSE	canonical	3	52	junction_1	85.8344660119439	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTTGACTTTGGACT	2734	False	NA	NA	False	AATGAA	-20	NA	80118199	80136401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ES.12314.81	chr15	+	1412	3	NNC	ENSMUSG00000042406.9	novel	1725	3	NA	NA	-26	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	689	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGGTTTTCAGTGTCA	4458	False	NA	34	True	AATAAA	-22	NA	80139697	80141744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80139887_80140407_80140723_80140836
ES.12314.82	chr15	+	1928	2	NIC	ENSMUSG00000042406.9	novel	1725	3	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	1292	junction_1	0	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATGTGGGTTTTCAGTG	4462	False	NA	31	True	AATAAA	-19	NA	80139701	80141741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80140723_80140834
ES.12314.83	chr15	+	1328	1	FSM	ENSMUSG00000042406.9	ENSMUST00000230434.2	2019	1	690	1	690	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATGTGGGTTTTCAGTG	5174	False	NA	31	True	AATAAA	-19	NA	80140413	80141741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80140400_80141700
ES.12314.9	chr15	+	4782	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	-19	-24	intron_retention	FALSE	canonical	3	4	junction_1	100.193282596944	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCTCCTACTCCACTG	2734	False	NA	NA	False	AATAAA	-23	NA	80118199	80136963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80118383_80118634_80118760_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ES.12315.1	chr15	-	1089	5	FSM	ENSMUSG00000051518.9	ENSMUST00000230189.2	525	5	-41	-523	-3	143	multi-exon	FALSE	canonical	2	6	junction_3	375.465377897883	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCGAGGGCCTCCTCTC	NA	False	NA	NA	False	CATAAA	-13	NA	80148488	80144672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_80145332_80145497_80145596_80147892_80148029_80148183_80148319_80148427
ES.12315.2	chr15	-	835	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	8	-5	8	5	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGTGTGTGTGTGTGT	NA	False	NA	0	True	AATAAA	-30	NA	80148508	80144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
ES.12315.3	chr15	-	839	4	NNC	ENSMUSG00000051518.9	novel	838	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	383.503150791055	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-25	NA	80148504	80144815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80145332_80145497_80145596_80148183_80148319_80148414
ES.12315.4	chr15	-	977	3	NIC	ENSMUSG00000051518.9	novel	838	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	697	junction_2	77.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-25	NA	80148489	80144815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_80145596_80148183_80148319_80148427
ES.12315.6	chr15	-	1108	4	NIC	ENSMUSG00000051518.9	novel	525	5	NA	NA	-6	-7	intron_retention	FALSE	canonical	2	6	junction_2	323.179000967988	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGATTCAAGTGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	80148491	80144822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_80145596_80147892_80148029_80148183_80148319_80148427
ES.12315.7	chr15	-	932	5	FSM	ENSMUSG00000051518.9	ENSMUST00000230189.2	525	5	-34	-373	4	-7	multi-exon	FALSE	canonical	2	6	junction_3	375.465377897883	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGATTCAAGTGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	80148481	80144822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_80145332_80145497_80145596_80147892_80148029_80148183_80148319_80148427
ES.12315.8	chr15	-	800	4	NNC	ENSMUSG00000051518.9	novel	838	4	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	389.156352468602	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGATTCAAGTGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	80148508	80144822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80145332_80145497_80145596_80148183_80148296_80148427
ES.12316.1	chr15	+	7118	37	NNC	ENSMUSG00000022416.16	novel	9781	37	NA	NA	3	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.314269680527355	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTATTTATTTTTTTT	138	False	NA	NA	False	NA	NA	NA	80171737	80280116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80171979_80182594_80182845_80204558_80204672_80205387_80205522_80220835_80220934_80232572_80232733_80239686_80240003_80240329_80240423_80242987_80243301_80246063_80246474_80252864_80253017_80253782_80253969_80254244_80254363_80254508_80254665_80254956_80255051_80255690_80255894_80256382_80256857_80257141_80257243_80257821_80257946_80258304_80258374_80258835_80259021_80259459_80259587_80259771_80259898_80260974_80261065_80262356_80262550_80263200_80263353_80264589_80264700_80265275_80265410_80266174_80266246_80271964_80272044_80272599_80272722_80273247_80273641_80273902_80274050_80275025_80275149_80275805_80275972_80277871_80278069_80279218
ES.12317.1	chr15	-	306	1	Intergenic	novelGene_10297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAGAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	80186598	80186292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80186300_80186600
ES.12318.1	chr15	+	181	1	Intergenic	novelGene_10298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCCCCCCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80319093	80319274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80319100_80319300
ES.12319.1	chr15	-	2695	6	NNC	ENSMUSG00000050439.8	novel	2236	7	NA	NA	0	-20612	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.24961536185438	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGAATCTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	80449357	80357052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80358675_80393382_80393510_80398262_80398382_80418714_80418949_80444204_80444702_80449261
ES.12319.2	chr15	-	2272	6	NNC	ENSMUSG00000050439.8	novel	2236	7	NA	NA	15	-21020	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.24961536185438	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAATATTGGCAGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	80449342	80357460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80358675_80393382_80393510_80398262_80398382_80418714_80418949_80444204_80444702_80449261
ES.12319.3	chr15	-	2103	6	NNC	ENSMUSG00000050439.8	novel	2236	7	NA	NA	-1	-21205	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.24961536185438	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTATGTTTTCTTTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	80449358	80357645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80358675_80393382_80393510_80398262_80398382_80418714_80418949_80444204_80444702_80449261
ES.12319.4	chr15	-	1067	3	ISM	ENSMUSG00000050439.8	ENSMUST00000229110.2	2236	7	-1	82035	-1	-82035	5prime_fragment	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTAGCCTAGCGGCT	NA	False	NA	NA	False	CATAAA	-13	NA	80449358	80418475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_80418949_80444204_80444702_80449261
ES.1232.1	chr1	-	1748	3	FSM	ENSMUSG00000026344.10	ENSMUST00000159417.2	6464	3	20	4696	20	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	125839931	125800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_125801309_125838127_125838266_125839575
ES.1232.2	chr1	-	760	3	NNC	ENSMUSG00000026344.10	novel	6464	3	NA	NA	25	-32881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTGACTCCGGTTCC	NA	False	NA	NA	False	NA	NA	NA	125839926	125834136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_125834408_125838127_125838266_125839575
ES.12320.1	chr15	+	5587	8	FSM	ENSMUSG00000042351.10	ENSMUST00000229980.2	1294	8	-15	-4278	-15	189	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTCGGGGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	80456779	80537244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80456943_80507923_80508016_80518536_80518629_80522645_80522766_80527845_80528012_80530337_80530554_80532058_80532176_80532623
ES.12321.1	chr15	-	2786	2	Antisense	novelGene_ENSMUSG00000042351.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCGTATTTCTCTTATGA	NA	False	NA	NA	False	NA	NA	NA	80510676	80466587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80469273_80510575
ES.12322.1	chr15	+	1857	4	ISM	ENSMUSG00000022408.8	ENSMUST00000023044.7	2993	5	11	7478	11	-7478	5prime_fragment	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCCACCTTGTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	80556058	80577148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80556589_80574117_80574286_80574733_80574856_80576111
ES.12323.1	chr15	+	182	1	Intergenic	novelGene_10299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTC	9822	False	NA	NA	False	NA	NA	NA	80588201	80588383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80588200_80588400
ES.12324.1	chr15	+	517	5	ISM	ENSMUSG00000047888.11	ENSMUST00000067689.9	17332	25	-55	82346	-55	-22749	5prime_fragment	FALSE	canonical	1	2	junction_2	3.57071421427143	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAGAAAAAAGAAGCC	NA	False	NA	NA	False	AAGAAA	-43	NA	80595458	80742940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881
ES.12324.10	chr15	+	5709	21	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-50	-197	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	5.88302643203309	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCACTTTTTTCATGTT	NA	False	NA	10	True	ATTAAA	-16	NA	80682792	80814012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.11	chr15	+	5769	21	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-50	-200	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	6.46123053295578	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTTCACTTTTTTCAT	NA	False	NA	7	True	ATTAAA	-13	NA	80682792	80814009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.12	chr15	+	5649	22	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-48	-414	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	5.61985466359312	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAGAAAAAAGGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	80682794	80813795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.13	chr15	+	5862	22	NIC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-39	-192	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	5.61985466359312	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTTTCATGTTATATG	NA	False	NA	15	True	ATTAAA	-21	NA	80682803	80814017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.14	chr15	+	5947	23	NNC	ENSMUSG00000047888.11	novel	5215	18	NA	NA	-6	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.00309848779468	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTTTCATGTTA	NA	False	NA	11	True	ATTAAA	-17	NA	80682836	80814013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80769170_80769293_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.15	chr15	+	3059	1	Intergenic	novelGene_10301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAACAAG	8544	False	NA	NA	False	NA	NA	NA	80752359	80755418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80752400_80755400
ES.12324.16	chr15	+	196	1	Intergenic	novelGene_10302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAACCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	80754625	80754821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80754600_80754800
ES.12324.17	chr15	+	1998	12	NIC	ENSMUSG00000047888.11	novel	3407	17	NA	NA	-55	-431	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	7.58532728909206	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGAAAACGG	NA	False	NA	NA	False	AATAAA	-10	NA	80773295	80813778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.18	chr15	+	2218	13	NIC	ENSMUSG00000047888.11	novel	1774	4	NA	NA	959	-414	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.3875834268649	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAGAAAAAAGGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	80774309	80813795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80774478_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.19	chr15	+	3175	1	Intergenic	novelGene_10303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTGCCTTGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	80779400	80782575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80779400_80782600
ES.12324.2	chr15	+	5736	24	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-54	-414	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	6.83120826993448	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAGAAAAAAGGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	80595459	80813795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.20	chr15	+	2543	4	NNC	ENSMUSG00000047888.11	novel	1774	4	NA	NA	594	1187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5854314646552	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGAGTGAAAGTAAAC	9219	False	NA	NA	False	AATATA	-16	NA	80807858	80815420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80808060_80808286_80808358_80811800_80811941_80813289
ES.12324.21	chr15	+	1824	13	Fusion	ENSMUSG00000047888.11_ENSMUSG00000022407.11	novel	466	4	NA	NA	7504	0	multi-exon	FALSE	canonical	0	0	junction_1	296.19667827682	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80814768	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_80814920_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.22	chr15	+	6410	1	FSM	ENSMUSG00000092868.3	ENSMUST00000175127.3	82	1	-5360	-968	-5360	968	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTCATTTCTGGTT	NA	False	NA	10	True	AATAAA	-22	NA	80818879	80825289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80818900_80825300
ES.12324.23	chr15	+	3830	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.483988147112	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832685	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840498_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80850166_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.24	chr15	+	1902	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	-3	1812	-3	15	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832687	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.25	chr15	+	2071	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	0	1640	0	187	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTTTTATATTTTT	NA	False	NA	5	True	NA	NA	NA	80832690	80853507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.26	chr15	+	1820	13	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	289.744379678978	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832699	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832847_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.28	chr15	+	2025	12	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	977	junction_4	61.6799256090707	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832699	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.29	chr15	+	4024	10	NIC	ENSMUSG00000022407.11	novel	1932	11	NA	NA	-5	15	intron_retention	FALSE	canonical	3	18	junction_3	335.782373672496	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832699	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.3	chr15	+	5945	23	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-53	-199	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.21453995600964	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCACTTTTTTCATG	NA	False	NA	8	True	ATTAAA	-14	NA	80595460	80814010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.30	chr15	+	1999	13	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	184	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	289.744379678978	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGTTTTATATT	NA	False	NA	2	True	NA	NA	NA	80832704	80853504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832847_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.31	chr15	+	5114	9	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_3	347.864175181924	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832704	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80847931_80848080_80850384_80851312_80851967_80852862
ES.12324.32	chr15	+	5013	10	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	977	junction_4	65.0033237516777	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832704	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80851403_80851789_80851967_80852862
ES.12324.33	chr15	+	2846	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	14	851	0	-851	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAGCTGTTGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	80832704	80854296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.34	chr15	+	3741	12	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	408.018554107369	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832705	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80850166_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.36	chr15	+	1828	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	297.384244520265	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832705	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845580_80846913_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.37	chr15	+	3381	11	NNC	ENSMUSG00000022407.11	novel	1932	11	NA	NA	1	15	intron_retention	TRUE	canonical	0	0	junction_7	427.945568968765	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832705	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80849150_80849786_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.38	chr15	+	4144	11	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	425.446870948653	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832706	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80849150_80849786_80851403_80851789_80851967_80852862
ES.12324.39	chr15	+	1788	12	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	304.280970635544	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832706	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.4	chr15	+	5814	24	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-41	-414	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.6687772336509	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAGAAAAAAGGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	80595472	80813795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.40	chr15	+	3445	12	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	310.2390174267	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832706	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80849150_80849786_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.41	chr15	+	1569	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	17	2125	3	66	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCGGCACTCCTTTACA	NA	False	NA	27	True	NA	NA	NA	80832707	80853022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.42	chr15	+	4092	11	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-1	15	intron_retention	FALSE	canonical	3	977	junction_4	63.0714674000851	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832711	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.43	chr15	+	3906	12	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	189	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	408.018554107369	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTTATATTTTTTA	NA	False	NA	7	True	NA	NA	NA	80832714	80853509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80850166_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.44	chr15	+	3859	11	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	15	intron_retention	FALSE	canonical	3	18	junction_3	318.610812748092	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832714	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.45	chr15	+	4433	10	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	2	-21	intron_retention	FALSE	canonical	3	977	junction_4	58.6131911163307	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAAAATAAATGAATCTT	NA	False	NA	NA	False	NA	NA	NA	80832721	80853299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80850384_80851312_80851967_80852862
ES.12324.46	chr15	+	2623	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	4	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	295.398165852276	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGTTTTATATT	NA	False	NA	2	True	NA	NA	NA	80832723	80853504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80845284_80845484_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.47	chr15	+	1510	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	5	57	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_11	286.620866011764	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTTCTGCGGCAC	NA	False	NA	18	True	NA	NA	NA	80832724	80853013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851822_80851967_80852862
ES.12324.48	chr15	+	3281	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	34	396	5	-396	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGCATCTTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	80832724	80854751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.49	chr15	+	3929	11	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	932	junction_6	71.5911307355876	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832727	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.5	chr15	+	5864	23	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-35	-199	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.93907965412424	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCACTTTTTTCATG	NA	False	NA	8	True	ATTAAA	-14	NA	80595478	80814010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.52	chr15	+	4748	10	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-3	15	intron_retention	FALSE	canonical	0	0	junction_8	335.756893239774	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80832734	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80849150_80849786_80851967_80852862
ES.12324.53	chr15	+	1806	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_11	286.620866011764	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832735	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851822_80851967_80852862
ES.12324.54	chr15	+	2188	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	-1	184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	397.656642790681	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGTTTTATATT	NA	False	NA	2	True	NA	NA	NA	80832741	80853504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847685_80847931_80848080_80848233_80850300_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.56	chr15	+	2619	6	NNC	ENSMUSG00000022407.11	novel	1439	12	NA	NA	-421	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	433.499896193759	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80847702	80853320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80847931_80848080_80849150_80849786_80850384_80851312_80851403_80851789_80851967_80852862
ES.12324.57	chr15	+	3644	2	NIC	ENSMUSG00000022407.11	novel	466	4	NA	NA	672	15	intron_retention	FALSE	canonical	3	1155	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACATTAAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	80848795	80853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80851967_80852862
ES.12324.58	chr15	+	2542	3	ISM	ENSMUSG00000022407.11	ENSMUST00000199284.2	466	4	3200	-2192	3200	1	3prime_fragment	FALSE	canonical	3	1148	junction_1	3.5	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAGAGGTGCAGAGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	80851323	80855148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_80851403_80851789_80851967_80852862
ES.12324.6	chr15	+	5847	25	FSM	ENSMUSG00000047888.11	ENSMUST00000067689.9	17332	25	-23	11508	-23	-431	multi-exon	FALSE	canonical	1	2	junction_2	6.56960594116742	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGAAAACGG	NA	False	NA	NA	False	AATAAA	-10	NA	80595490	80813778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.7	chr15	+	6247	26	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	-21	-200	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	7.24165726888535	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTTCACTTTTTTCAT	NA	False	NA	7	True	ATTAAA	-13	NA	80595492	80814009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80774306_80774478_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.8	chr15	+	5974	24	NIC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	14	-199	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.6687772336509	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCACTTTTTTCATG	NA	False	NA	8	True	ATTAAA	-14	NA	80595527	80814010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80595690_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12324.9	chr15	+	5707	25	NNC	ENSMUSG00000047888.11	novel	17332	25	NA	NA	15	-431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.75391925988973	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGAAAACGG	NA	False	NA	NA	False	AATAAA	-10	NA	80595528	80813778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80750707_80750765_80760517_80760863_80763067_80765408_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ES.12325.1	chr15	-	4039	2	Antisense	novelGene_ENSMUSG00000047888.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTGCTCTGAAC	NA	False	NA	NA	False	NA	NA	NA	80633323	80629195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_80633018_80633106
ES.12326.1	chr15	-	227	1	Intergenic	novelGene_10300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAAATCTATTTAAGA	NA	False	NA	NA	False	NA	NA	NA	80716115	80715888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80715900_80716100
ES.12327.1	chr15	-	2019	1	Intergenic	novelGene_10304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCCTTTATAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	80828958	80826939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80826900_80829000
ES.12328.1	chr15	-	366	1	Intergenic	novelGene_10305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	80835922	80835556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80835600_80835900
ES.12328.2	chr15	-	158	1	Intergenic	novelGene_10306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	80835922	80835764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80835800_80835900
ES.12329.1	chr15	+	830	1	Intergenic	novelGene_10307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATATAATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	80857400	80858230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80857400_80858200
ES.1233.1	chr1	-	177	1	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	126225593	126225416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_126225400_126225600
ES.12330.1	chr15	+	3005	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	-9	1	-9	-1	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTGTTTTATTTTA	NA	False	NA	6	True	AATACA	-16	NA	80861956	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.10	chr15	+	3456	18	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	19	181	intron_retention	FALSE	canonical	3	124	junction_4	15.3895214429239	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861998	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893991_80894141_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.14	chr15	+	2992	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	20	181	intron_retention	FALSE	canonical	3	124	junction_4	15.0375363673708	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861999	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.15	chr15	+	2905	21	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	20	181	intron_retention	FALSE	canonical	0	0	junction_6	47.350052798281	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861999	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891730_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895190_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.16	chr15	+	2850	20	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	181	intron_retention	FALSE	canonical	0	0	junction_13	48.5301973558903	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862001	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891706_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894641_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.17	chr15	+	2869	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	181	intron_retention	FALSE	canonical	3	124	junction_4	14.7961988361876	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862001	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.18	chr15	+	3390	20	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	-1	intron_retention	FALSE	canonical	0	0	junction_7	48.1819037074641	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTGTTTTATTTTA	NA	False	NA	6	True	AATACA	-16	NA	80862001	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892024_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895817
ES.12330.19	chr15	+	2814	22	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	181	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.2891522006204	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862001	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887720_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.2	chr15	+	2780	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	0	217	0	184	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCCATCTTTTGTTG	NA	False	NA	15	True	AATAAA	-15	NA	80861965	80896274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.20	chr15	+	2684	22	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.511870839503	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAAGCCTCCCATCTTT	NA	False	NA	10	True	AATAAA	-10	NA	80862001	80896269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892939_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.22	chr15	+	2969	23	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.777782514019	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCTCCCATCTTTTGT	NA	False	NA	13	True	AATAAA	-13	NA	80862001	80896272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80864444_80864672_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.24	chr15	+	3310	20	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	186	intron_retention	FALSE	canonical	3	124	junction_4	15.3361232356902	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCATCTTTTGTTGAG	NA	False	NA	17	True	AATAAA	-17	NA	80862001	80896276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.25	chr15	+	3356	19	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-19	186	intron_retention	FALSE	canonical	3	124	junction_4	14.7648230602334	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCATCTTTTGTTGAG	NA	False	NA	17	True	AATAAA	-17	NA	80862001	80896276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893736_80893834_80893991_80894141_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.26	chr15	+	3367	19	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-18	181	intron_retention	FALSE	canonical	1	1	junction_7	37.5723581741342	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862002	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80891939_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.27	chr15	+	3337	20	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	36.9621353006476	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTGTTTTATTTTA	NA	False	NA	6	True	AATACA	-16	NA	80862004	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890604_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.28	chr15	+	2652	22	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-10	181	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	46.4311842976619	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862010	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891706_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894176_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.29	chr15	+	3504	16	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-10	181	intron_retention	FALSE	non_canonical	0	0	junction_6	40.9498338078299	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862010	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80890965_80892141_80892248_80892489_80893736_80893834_80893991_80894141_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.3	chr15	+	2798	22	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	9	186	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	34.5722156541651	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCATCTTTTGTTGAG	NA	False	NA	17	True	AATAAA	-17	NA	80861988	80896276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895817
ES.12330.30	chr15	+	2732	22	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-3	181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.2158230772949	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862017	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890600_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.31	chr15	+	3136	20	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	7	181	intron_retention	FALSE	canonical	0	0	junction_6	48.2089749233262	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80862044	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891730_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895817
ES.12330.32	chr15	+	183	1	Intergenic	novelGene_10310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATATAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	80875602	80875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80875600_80875800
ES.12330.33	chr15	+	176	2	Antisense	novelGene_ENSMUSG00000116321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGAGATTG	NA	False	NA	NA	False	NA	NA	NA	80875605	81019636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_80875685_81019539
ES.12330.34	chr15	+	178	1	Intergenic	novelGene_10311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	80878769	80878947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80878800_80878900
ES.12330.35	chr15	+	174	1	Intergenic	novelGene_10312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATATCTTCG	NA	False	NA	NA	False	NA	NA	NA	80886525	80886699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80886500_80886700
ES.12330.36	chr15	+	204	1	Intergenic	novelGene_10313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTGCATAGTATCATA	NA	False	NA	4	True	NA	NA	NA	80888920	80889124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80888900_80889100
ES.12330.37	chr15	+	2493	19	NNC	ENSMUSG00000042303.20	novel	1968	18	NA	NA	-655	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4625739164362	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCCATCTTTTGTTG	NA	False	NA	15	True	AATAAA	-15	NA	80890009	80896274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80890073_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.38	chr15	+	3194	8	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	-122	-6	intron_retention	FALSE	canonical	3	136	junction_3	14.6036059287578	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTGTTTTTGTTTTA	NA	False	NA	1	True	AATACA	-11	NA	80892437	80896485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80893480_80893607_80893736_80893834_80893991_80894141_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.39	chr15	+	2686	2	Antisense	novelGene_ENSMUSG00000042292.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCATGGCAACCCAGGC	2047	False	NA	NA	False	NA	NA	NA	80904446	80907570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_80904514_80904951
ES.12330.4	chr15	+	2677	21	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	11	181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.7078604955449	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861990	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862074_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891679_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.40	chr15	+	158	1	Intergenic	novelGene_10314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80921341	80921499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80921300_80921500
ES.12330.41	chr15	+	177	1	Intergenic	novelGene_10316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCTTAAATCTTAAA	3164	False	NA	NA	False	NA	NA	NA	80951680	80951857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_80951700_80951900
ES.12330.5	chr15	+	3158	21	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	14	-1	intron_retention	FALSE	canonical	1	1	junction_6	35.9456186481746	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTGTTTTATTTTA	NA	False	NA	6	True	AATACA	-16	NA	80861993	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891706_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.6	chr15	+	2867	21	NNC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	14	184	intron_retention	FALSE	canonical	2	4	junction_20	35.0318069759469	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCCATCTTTTGTTG	NA	False	NA	15	True	AATAAA	-15	NA	80861993	80896274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895273_80895438_80895562_80895662_80895724_80895817
ES.12330.7	chr15	+	3459	20	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	14	-1	intron_retention	FALSE	canonical	3	124	junction_4	15.3084627076305	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTGTTTTATTTTA	NA	False	NA	6	True	AATACA	-16	NA	80861993	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.8	chr15	+	3382	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	14	181	intron_retention	FALSE	canonical	3	124	junction_4	14.9274076784953	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861993	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12330.9	chr15	+	3147	20	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	16	181	intron_retention	FALSE	canonical	3	124	junction_4	14.9703307686938	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCTCCCATCTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	80861995	80896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ES.12331.1	chr15	+	3587	2	Antisense	novelGene_ENSMUSG00000042292.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	81029970	81036020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81030084_81032546
ES.12332.1	chr15	+	4689	1	Intergenic	novelGene_10319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGACCCATTTCCTCCT	7027	False	NA	NA	False	NA	NA	NA	81051721	81056410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81051700_81056400
ES.12333.1	chr15	-	181	1	Intergenic	novelGene_10308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	80866721	80866540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80866500_80866700
ES.12334.1	chr15	-	172	1	Intergenic	novelGene_10309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAGTGCTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	80872425	80872253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80872300_80872400
ES.12335.1	chr15	-	4080	15	NNC	ENSMUSG00000042292.19	novel	4392	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.3252965094803	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	81074927	80896481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901011_80901265_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ES.12335.10	chr15	-	4124	13	ISM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	32	1756	-2	-1746	5prime_fragment	FALSE	canonical	3	46	junction_3	8.02556678510759	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATATGTTCTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	81074926	80898237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ES.12335.11	chr15	-	2186	4	FSM	ENSMUSG00000042292.19	ENSMUST00000123243.8	849	4	-53	-1284	-24	1284	multi-exon	FALSE	canonical	3	50	junction_1	7.40870359029762	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTCTCCTTTCATCAT	NA	False	NA	NA	False	NA	NA	NA	81074982	80909335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_80910919_80929489_80929556_81001591_81001854_81074707
ES.12335.12	chr15	-	132	1	Intergenic	novelGene_10315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80924358	80924226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80924200_80924400
ES.12335.13	chr15	-	174	1	Intergenic	novelGene_10317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	80994246	80994072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80994100_80994200
ES.12335.14	chr15	-	170	2	Intergenic	novelGene_10318	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAATAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	81000194	80994073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_80994223_81000173
ES.12335.2	chr15	-	4397	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	-31	0	-31	0	multi-exon	FALSE	canonical	3	46	junction_4	7.74138192332869	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	81074989	80896481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ES.12335.3	chr15	-	4184	13	NIC	ENSMUSG00000042292.19	novel	4366	14	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	17.4068951855292	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	81074952	80896481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ES.12335.5	chr15	-	4228	12	NIC	ENSMUSG00000042292.19	novel	4366	14	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	18.1057499656375	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCAGTCTGTTGTATTT	NA	False	NA	-10	True	AATAAA	-14	NA	81074959	80896488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80929489_80929556_81001591_81001854_81074707
ES.12335.6	chr15	-	5472	10	ISM	ENSMUSG00000042292.19	ENSMUST00000109579.9	4154	13	79718	-3	-1395	3	3prime_fragment	FALSE	canonical	3	46	junction_4	8.24621125123532	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCAGTCTGTTGTATTT	NA	False	NA	-10	True	AATAAA	-14	NA	80909566	80896488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742
ES.12335.7	chr15	-	3832	14	NNC	ENSMUSG00000042292.19	novel	4154	13	NA	NA	68	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.5733234348273	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCAGTCTGTTGTAT	NA	False	NA	-12	True	AATAAA	-12	NA	80989216	80896490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901011_80901265_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_80988973
ES.12336.1	chr15	-	228	1	Intergenic	novelGene_10320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAACAACAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	81078723	81078495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81078500_81078700
ES.12337.1	chr15	+	201	1	Intergenic	novelGene_10321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAACTAGTTTA	NA	False	NA	NA	False	NA	NA	NA	81159339	81159540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81159300_81159500
ES.12338.1	chr15	+	139	1	Intergenic	novelGene_10322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	81185092	81185231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81185100_81185200
ES.12339.1	chr15	-	165	1	Intergenic	novelGene_10323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	81200265	81200100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81200100_81200300
ES.1234.1	chr1	+	4675	18	NNC	ENSMUSG00000036155.14	novel	8436	18	NA	NA	-36	-1100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.34557671027963	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCGTGAATTAGAGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	127132715	127414973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127133165_127234373_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263_127410341_127412987
ES.1234.2	chr1	+	3103	6	ISM	ENSMUSG00000036155.14	ENSMUST00000190921.2	2984	11	-6	30362	4	-19782	5prime_fragment	FALSE	canonical	0	0	junction_2	2.41660919471891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTTTAATGGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127132758	127296167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127133165_127177526_127177577_127234373_127234754_127248340_127248503_127292884_127292962_127294139
ES.1234.3	chr1	+	3233	18	FSM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	216	4987	206	-355	multi-exon	FALSE	canonical	0	0	junction_2	2.16930457818656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGATGTAGCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	127132970	127411086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263
ES.1234.4	chr1	+	2924	18	FSM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	243	5269	233	-637	multi-exon	FALSE	canonical	0	0	junction_2	2.16930457818656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAACAGGAAGAGGG	NA	False	NA	NA	False	GATAAA	-24	NA	127132997	127410804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263
ES.1234.5	chr1	+	1431	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTAGGGTTCAATTGCC	NA	False	NA	NA	False	NA	NA	NA	127164665	127166096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_127164700_127166100
ES.1234.6	chr1	+	585	4	ISM	ENSMUSG00000036155.14	ENSMUST00000171405.2	3216	16	206	117005	206	-21513	5prime_fragment	FALSE	canonical	2	5	junction_1	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTCTTCACCAGTTTT	6039	False	NA	NA	False	AGTAAA	-19	NA	127234704	127294436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127234754_127248340_127248503_127292884_127292962_127294139
ES.1234.7	chr1	+	3521	1	ISM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	278698	1100	176954	-1100	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCGTGAATTAGAGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	127411452	127414973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127411500_127415000
ES.1234.8	chr1	+	4232	1	ISM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	279085	2	177341	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGTAGTGATTTGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	127411839	127416071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127411800_127416100
ES.12340.1	chr15	+	201	1	Intergenic	novelGene_10325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGGATCATCAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	81210740	81210941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81210700_81210900
ES.12341.1	chr15	+	9262	1	Antisense	novelGene_ENSMUSG00000022404.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGACATGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	81212737	81221999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81212700_81222000
ES.12342.1	chr15	-	1737	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	-13	0	-13	0	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAGTTGCTCTTGATT	6835	False	NA	-10	True	AATAAA	-27	NA	81245026	81203111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.10	chr15	-	1729	9	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	112.018692636542	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6895	False	NA	-18	True	AATAAA	-19	NA	81244966	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224114_81224242_81228301_81228363_81244877
ES.12342.11	chr15	-	6720	7	NIC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	302	junction_4	18.6077940659284	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6879	False	NA	-18	True	AATAAA	-19	NA	81244982	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81203978_81207810_81211338_81211417_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.12	chr15	-	1502	8	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	-21	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	119.573562022271	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACATTCATGAAAGTT	6912	False	NA	-20	True	AATAAA	-17	NA	81244949	81203121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222208_81228301_81228363_81244877
ES.12342.14	chr15	-	9326	6	NIC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	5	-13	intron_retention	FALSE	canonical	3	335	junction_3	8.47584804016684	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAAACATTCATGAAA	6866	False	NA	-23	True	AATAAA	-14	NA	81244995	81203124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81213368_81222136_81228363_81244877
ES.12342.15	chr15	-	3464	7	NIC	ENSMUSG00000022404.9	novel	843	8	NA	NA	1	-13	intron_retention	FALSE	canonical	3	302	junction_4	19.0211870175222	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAAACATTCATGAAA	6862	False	NA	-23	True	AATAAA	-14	NA	81244999	81203124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81203978_81207810_81207894_81211241_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.16	chr15	-	1734	10	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	15	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	137.898334352827	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAACATTCATGAA	6902	False	NA	-24	True	AATAAA	-13	NA	81244959	81203125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81243990_81244069_81244877
ES.12342.18	chr15	-	1522	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	50	152	11	-152	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGGTGTTTGACATA	6898	False	NA	NA	False	NA	NA	NA	81244963	81203263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.19	chr15	-	177	1	Intergenic	novelGene_10324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAATCTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	81208902	81208725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81208700_81208900
ES.12342.3	chr15	-	3394	8	NIC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	302	junction_5	17.6149287334838	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGAAAGTTGCTCTTGA	6863	False	NA	-12	True	AATAAA	-25	NA	81244998	81203113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.4	chr15	-	1521	8	FSM	ENSMUSG00000022404.9	ENSMUST00000231140.2	843	8	14	-692	10	-8	multi-exon	FALSE	canonical	0	0	junction_3	118.944679303842	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6897	False	NA	-18	True	AATAAA	-19	NA	81244964	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.6	chr15	-	3304	7	NIC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	1	junction_5	128.65770694193	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6880	False	NA	-18	True	AATAAA	-19	NA	81244981	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81213368_81222136_81222289_81228301_81228363_81244877
ES.12342.7	chr15	-	1391	10	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	105.330989190981	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6851	False	NA	-18	True	AATAAA	-19	NA	81245010	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81203477_81203798_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ES.12342.8	chr15	-	1632	9	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	109.401496790492	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTCATGAAAGTTGC	6851	False	NA	-18	True	AATAAA	-19	NA	81245010	81203119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222208_81224174_81224242_81228301_81228363_81244877
ES.12343.1	chr15	+	930	1	Antisense	novelGene_ENSMUSG00000022403.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81248085	81249015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81248100_81249000
ES.12344.1	chr15	+	2698	2	Antisense	novelGene_ENSMUSG00000022403.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGGCATTTTAAAAAG	8818	False	NA	NA	False	NA	NA	NA	81268086	81270980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81268450_81268645
ES.12344.2	chr15	+	158	1	Antisense	novelGene_ENSMUSG00000022403.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	9194	False	NA	NA	False	NA	NA	NA	81268462	81268620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81268500_81268600
ES.12345.1	chr15	+	6080	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	-24	2	-24	-2	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTGTCTGTCTTATT	NA	False	NA	22	True	TATAAA	-15	NA	81284314	81341681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.10	chr15	+	1744	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	16	4298	4	153	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAGTGACATTAATTC	NA	False	NA	NA	False	NA	NA	NA	81284354	81337385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.11	chr15	+	3012	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	20	3026	8	-432	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAACAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	81284358	81338657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.12	chr15	+	4373	11	NNC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	-9	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.7050947147733	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATACCGAGTGGTCT	NA	False	NA	5	True	AATATA	-5	NA	81284379	81341664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065_81337527_81339151
ES.12345.13	chr15	+	3495	11	FSM	ENSMUSG00000022401.13	ENSMUST00000165258.8	1641	11	0	-1854	0	-3	multi-exon	FALSE	canonical	2	2	junction_2	17.7977526671206	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81284396	81339086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81300103_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.14	chr15	+	178	1	Intergenic	novelGene_10327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	81287281	81287459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81287300_81287500
ES.12345.15	chr15	+	194	1	Intergenic	novelGene_10328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTTGACTTTAATATC	244	False	NA	NA	False	NA	NA	NA	81302041	81302235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81302000_81302200
ES.12345.16	chr15	+	156	1	Intergenic	novelGene_10330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	81334323	81334479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81334300_81334500
ES.12345.2	chr15	+	2706	6	NIC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	1	236	intron_retention	FALSE	canonical	3	9	junction_2	21.9308002589965	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTACTTTTAAAATGG	NA	False	NA	NA	False	NA	NA	NA	81284339	81322595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81284489_81298632_81298750_81300047_81300196_81311476_81311885_81314890_81315094_81320914
ES.12345.3	chr15	+	2673	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	3	3382	3	-788	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTTCTTTATAGGTTC	NA	False	NA	NA	False	NA	NA	NA	81284341	81338301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.4	chr15	+	6193	11	NIC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	3	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	16.5060594934103	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGGTCTGGCGTGTCT	NA	False	NA	14	True	TATAAA	-7	NA	81284341	81341673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81284489_81298632_81298750_81300047_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.5	chr15	+	1396	7	NIC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	3	218	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	20.0810856280232	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	81284341	81322577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81284489_81298632_81298750_81300047_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267
ES.12345.6	chr15	+	5639	11	NNC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.7050947147733	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGGTCTGGCGTGTCT	NA	False	NA	14	True	TATAAA	-7	NA	81284342	81341673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065_81337261_81337665
ES.12345.7	chr15	+	3469	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	12	2577	0	17	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAACTGGGCATA	NA	False	NA	NA	False	NA	NA	NA	81284350	81339106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.8	chr15	+	6119	11	FSM	ENSMUSG00000022401.13	ENSMUST00000165258.8	1641	11	-46	-4432	0	-19	multi-exon	FALSE	canonical	2	2	junction_2	17.7977526671206	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATACCGAGTGGTCT	NA	False	NA	5	True	AATATA	-5	NA	81284350	81341664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81284489_81298632_81298750_81300103_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ES.12345.9	chr15	+	5921	10	NNC	ENSMUSG00000022401.13	novel	6058	10	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.214610086182	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGGTCTGGCGTGTCT	NA	False	NA	14	True	TATAAA	-7	NA	81284351	81341673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337179
ES.12346.1	chr15	-	4660	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	363	-1677	-86	1677	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	81283881	81246192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.10	chr15	-	3082	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	981.260506602697	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81284276	81247869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267250_81272530_81272602_81273851_81273925_81276465_81276524_81283983
ES.12346.11	chr15	-	2957	11	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_2	742.189086419357	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81283904	81247869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.12	chr15	-	3303	13	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_12	706.153208706628	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81284302	81247869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685_81283889_81283989
ES.12346.13	chr15	-	3090	13	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	939.498754508074	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81283918	81247869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81280305_81280376_81283685
ES.12346.18	chr15	-	3156	11	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-144	-2	intron_retention	FALSE	canonical	3	2366	junction_3	115.590484037398	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTTGACCTTCCCCCAT	NA	False	NA	-21	True	AATAAA	-16	NA	81283939	81247871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.19	chr15	-	3219	13	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	709.159459422836	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTTGACCTTCCCCCAT	NA	False	NA	-21	True	AATAAA	-16	NA	81284280	81247871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685_81283829_81283989
ES.12346.20	chr15	-	4467	4	ISM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	26218	3	12101	-3	3prime_fragment	FALSE	canonical	3	2366	junction_3	134.40320763368	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTGACCTTCCCCCA	NA	False	NA	-22	True	AATAAA	-15	NA	81258026	81247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658
ES.12346.23	chr15	-	2970	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	248	128	-201	-128	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTTTCCCTCACT	NA	False	NA	NA	False	AATATA	-45	NA	81283996	81247997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.24	chr15	-	2791	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	297	258	-152	-258	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGCATAAATAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	81283947	81248127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.25	chr15	-	2487	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	303	556	-146	-556	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGCATATTTCAAAT	NA	False	NA	NA	False	GATAAA	-16	NA	81283941	81248425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.26	chr15	-	2412	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	255	679	-194	-679	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGTCTAAGTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	81283989	81248548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.27	chr15	-	2046	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	243	1057	-206	724	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCTTTCTGTTTTTGTC	NA	False	NA	1	True	AATAAA	-31	NA	81284001	81248926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.30	chr15	-	1937	12	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	35	711	combination_of_known_junctions	FALSE	canonical	3	177	junction_11	682.393841833219	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGAGAAAAAGAGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	81284209	81248939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283989
ES.12346.32	chr15	-	1822	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-100	602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	740.766712477045	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCGTTTTTTTTTT	NA	False	NA	-22	True	TTTAAA	-14	NA	81283895	81249048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276461_81276524_81283685
ES.12346.33	chr15	-	2045	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	-61	1362	-27	419	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCTTGATTTGTGTTT	NA	False	NA	-17	True	AATAAA	-38	NA	81284305	81249231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.36	chr15	-	6632	11	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-131	406	intron_retention	FALSE	canonical	3	2366	junction_3	115.54051237553	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283926	81249244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.40	chr15	-	1631	12	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	35	405	combination_of_known_junctions	FALSE	canonical	3	177	junction_11	682.393841833219	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACGGTTCCTGAAGTAT	NA	False	NA	-31	True	AATAAA	-24	NA	81284209	81249245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283989
ES.12346.42	chr15	-	1738	13	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-147	405	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	939.498754508074	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACGGTTCCTGAAGTAT	NA	False	NA	-31	True	AATAAA	-24	NA	81283942	81249245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81280305_81280376_81283685
ES.12346.44	chr15	-	1131	6	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-76	404	combination_of_known_splicesites	FALSE	canonical	2	27	junction_5	1005.41541663135	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATACGGTTCCTGAAGTA	NA	False	NA	-32	True	AATAAA	-23	NA	81283871	81249246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81283685
ES.12346.45	chr15	-	4441	3	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	13657	404	intron_retention	FALSE	canonical	3	2366	junction_2	151.5	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATACGGTTCCTGAAGTA	NA	False	NA	-32	True	AATAAA	-23	NA	81256470	81249246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81253644_81255658
ES.12346.47	chr15	-	1630	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-152	404	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	740.766712477045	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATACGGTTCCTGAAGTA	NA	False	NA	-32	True	AATAAA	-23	NA	81283947	81249246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273893_81276475_81276524_81283685
ES.12346.49	chr15	-	1319	13	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-82	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	711.346005041772	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACACATTAAGTTG	NA	False	NA	-61	True	AATAAA	-19	NA	81283877	81249275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249353_81249606_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.50	chr15	-	1672	12	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-187	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	735.228608963237	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACACATTAAGTTG	NA	False	NA	-61	True	AATAAA	-19	NA	81283982	81249275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261894_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ES.12346.51	chr15	-	4342	6	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	7925	375	intron_retention	FALSE	canonical	3	2366	junction_3	114.773864620827	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACACATTAAGTTG	NA	False	NA	-61	True	AATAAA	-19	NA	81262202	81249275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81259108_81261888_81262000_81262116
ES.12346.52	chr15	-	177	2	Intergenic	novelGene_10326	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	81330931	81260909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81260938_81330782
ES.12346.53	chr15	-	3644	1	FSM	ENSMUSG00000022403.16	ENSMUST00000230906.2	4026	1	-3619	4001	1161	-2308	mono-exon	FALSE	NA	NA	NA	NA	NA	1053	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81282423	81278779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81278800_81282400
ES.12346.54	chr15	-	178	1	Intergenic	novelGene_10329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	81330931	81330753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81330800_81330900
ES.12346.6	chr15	-	7268	6	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	6069	1	intron_retention	TRUE	non_canonical	0	0	junction_5	1021.56339010362	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACCTTCCCCCATTTG	NA	False	NA	-18	True	AATAAA	-19	NA	81264058	81247868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81249780_81250547_81253644_81255658_81255776_81259004_81259108_81261888_81262224_81262352
ES.12347.1	chr15	+	175	1	Intergenic	novelGene_10331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	81343615	81343790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81343600_81343800
ES.12348.1	chr15	+	588	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	-19	1106	-19	-123	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTGTTTCATGTATG	NA	False	NA	17	True	AATAAA	-17	NA	81350477	81359464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ES.12348.10	chr15	+	3323	4	NIC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	13	-128	intron_retention	FALSE	canonical	3	4160	junction_1	266.857015397135	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGTTGCTGTTTCAT	NA	False	NA	12	True	AATAAA	-12	NA	81350557	81359459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81350652_81352355_81352435_81355152_81358130_81359286
ES.12348.11	chr15	+	449	5	NNC	ENSMUSG00000022400.10	novel	651	5	NA	NA	37	-127	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	2250.3194634318	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTTGCTGTTTCATG	NA	False	NA	13	True	AATAAA	-13	NA	81350878	81359460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358092_81359286
ES.12348.12	chr15	+	488	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	37	126	37	-126	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTTGCTGTTTCATGT	NA	False	NA	14	True	AATAAA	-14	NA	81350878	81359461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ES.12348.13	chr15	+	3281	4	NIC	ENSMUSG00000022400.10	novel	651	5	NA	NA	64	-126	intron_retention	FALSE	canonical	3	348	junction_1	2037.58359065067	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTTGCTGTTTCATGT	NA	False	NA	14	True	AATAAA	-14	NA	81350905	81359461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81350956_81352355_81352435_81355152_81358130_81359286
ES.12348.14	chr15	+	4835	1	NIC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	-2095	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGCTCCTTTGTGTCA	NA	False	NA	9	True	NA	NA	NA	81355727	81360562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81355700_81360600
ES.12348.2	chr15	+	977	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	48	650	0	147	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGATGTTTGGACAGT	NA	False	NA	8	True	AATAAA	-21	NA	81350544	81359920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ES.12348.4	chr15	+	1626	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	49	0	1	0	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGTCATTTTCACC	NA	False	NA	17	True	NA	NA	NA	81350545	81360570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ES.12348.5	chr15	+	4495	3	FSM	ENSMUSG00000022400.10	ENSMUST00000230219.2	555	3	2	-3942	2	-124	multi-exon	FALSE	canonical	3	4160	junction_1	326.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGCTGTTTCATGTAT	NA	False	NA	16	True	AATAAA	-16	NA	81350546	81359463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350652_81352355_81352435_81355152
ES.12348.6	chr15	+	443	4	NIC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	4	-126	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	2043.41239651281	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTTGCTGTTTCATGT	NA	False	NA	14	True	AATAAA	-14	NA	81350548	81359461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81350652_81352355_81352435_81358043_81358130_81359286
ES.12348.7	chr15	+	1661	5	NNC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1961.52343536854	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTTTGTGTCAT	NA	False	NA	10	True	NA	NA	NA	81350548	81360563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358175_81359286
ES.12348.8	chr15	+	4432	4	NIC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	9	-6	intron_retention	FALSE	canonical	3	4160	junction_1	266.857015397135	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTCCTTTGTGTCATT	NA	False	NA	11	True	NA	NA	NA	81350553	81360564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81350652_81352355_81352435_81355152_81358130_81359286
ES.12348.9	chr15	+	437	3	FSM	ENSMUSG00000022400.10	ENSMUST00000230219.2	555	3	13	105	13	-105	multi-exon	FALSE	canonical	3	4160	junction_1	326.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTGAGTTGACCTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	81350557	81355416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81350652_81352355_81352435_81355152
ES.12349.1	chr15	-	168	1	Intergenic	novelGene_10332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGAATTTATATA	3228	False	NA	NA	False	NA	NA	NA	81362119	81361951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81362000_81362100
ES.1235.1	chr1	-	148	1	FSM	ENSMUSG00000099471.2	ENSMUST00000170338.3	447	1	336	-37	336	37	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	127210509	127210361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_127210400_127210500
ES.12350.1	chr15	-	219	1	Intergenic	novelGene_10333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAACTAAGACAGGCAGC	7232	False	NA	NA	False	NA	NA	NA	81367652	81367433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81367400_81367700
ES.12351.1	chr15	-	186	1	Intergenic	novelGene_10334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACGAAACAAACAA	5107	False	NA	NA	False	NA	NA	NA	81375629	81375443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81375400_81375600
ES.12352.1	chr15	+	133	1	Intergenic	novelGene_10335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81392981	81393114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81393000_81393100
ES.12353.1	chr15	+	197	1	Intergenic	novelGene_10336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGATTCAAACAGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	81430206	81430403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81430200_81430400
ES.12354.1	chr15	+	8297	31	NNC	ENSMUSG00000055024.13	novel	2493	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.556588562632	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTCACTTCTTTGG	2831	False	NA	22	True	AATAAA	-22	NA	81469519	81536278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81469577_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.10	chr15	+	6788	25	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	2714	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	25.1437188423316	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGAGCTTGGTGTCA	NA	False	NA	13	True	AATAAA	-13	NA	81500247	81536269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515835_81516055_81516624_81516714_81518174_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.11	chr15	+	6606	24	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	2732	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	25.1574249526009	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTGGTGTCACTTC	NA	False	NA	17	True	AATAAA	-17	NA	81500265	81536273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81500327_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515835_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.12	chr15	+	7882	23	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	33286	6	-2379	-6	3prime_fragment	FALSE	canonical	3	62	junction_6	13.8835921947962	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGCTTGGTGTCACTT	NA	False	NA	16	True	AATAAA	-16	NA	81502883	81536272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.13	chr15	+	6594	23	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	-1063	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	20.4822035229861	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGCTTGGTGTCAC	NA	False	NA	14	True	AATAAA	-14	NA	81504199	81536270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518174_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.14	chr15	+	8346	12	NIC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	2439	-541	intron_retention	FALSE	canonical	3	72	junction_4	10.0576848625013	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTTCATTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	81514064	81535737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.15	chr15	+	7234	3	NNC	ENSMUSG00000055024.13	novel	850	3	NA	NA	-3193	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	54.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGCTTGGTGTCACTT	NA	False	NA	16	True	AATAAA	-16	NA	81514986	81536272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81515016_81528886_81532822_81533002
ES.12354.16	chr15	+	4833	13	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	47025	5	-1557	-5	3prime_fragment	FALSE	canonical	3	72	junction_5	9.65516557197349	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTGGTGTCACTTC	NA	False	NA	17	True	AATAAA	-17	NA	81516622	81536273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.17	chr15	+	5538	9	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	52569	7	1818	-7	3prime_fragment	FALSE	canonical	3	72	junction_1	11.3350948385975	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGAGCTTGGTGTCACT	NA	False	NA	15	True	AATAAA	-15	NA	81522166	81536271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.18	chr15	+	4048	5	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	55858	8	-3595	-8	3prime_fragment	FALSE	canonical	3	83	junction_3	9.52299847737046	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGCTTGGTGTCAC	1604	False	NA	14	True	AATAAA	-14	NA	81525455	81536270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.19	chr15	+	168	1	Intergenic	novelGene_10339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	81536464	81536632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81536500_81536600
ES.12354.2	chr15	+	9504	30	NIC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	19.689141849701	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTGTCACTTCTTTG	2832	False	NA	21	True	AATAAA	-21	NA	81469520	81536277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.3	chr15	+	9658	31	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	-22	-6	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_19	19.8285988746894	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGCTTGGTGTCACTT	2841	False	NA	16	True	AATAAA	-16	NA	81469529	81536272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518174_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.4	chr15	+	9612	31	FSM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	-46	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	16.0257085126784	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTCACTTCTTTGG	2863	False	NA	22	True	AATAAA	-22	NA	81469551	81536278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.5	chr15	+	9585	31	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	20.3674304275778	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGCTTGGTGTCACTT	2863	False	NA	16	True	AATAAA	-16	NA	81469551	81536272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515835_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.6	chr15	+	9629	32	NNC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	31	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0234883327825	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACACCTGAGCTTGGTG	2940	False	NA	10	True	AATAAA	-10	NA	81469628	81536266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81470924_81473164_81473271_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12354.9	chr15	+	8143	28	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	25168	-928	-2750	928	3prime_fragment	FALSE	canonical	3	47	junction_5	15.653658902539	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCAGAGTCAGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	81494765	81537206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ES.12355.1	chr15	+	198	1	Intergenic	novelGene_10342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAACTATAGCTCATCC	NA	False	NA	NA	False	NA	NA	NA	81544838	81545036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81544800_81545000
ES.12356.1	chr15	+	3757	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	-260	-10	-260	10	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGAGTGGGCCTCGGC	NA	False	NA	27	True	AATAAA	-34	NA	81547829	81572526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.10	chr15	+	3417	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-7	1	intron_retention	FALSE	canonical	2	19	junction_8	164.713956603562	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGATATCAGATGAGTG	NA	False	NA	18	True	AATAAA	-25	NA	81548127	81572517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566153_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.12	chr15	+	4968	14	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-5	4	intron_retention	FALSE	canonical	3	631	junction_12	43.0006192331909	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81548129	81572510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81568585_81568914_81569648_81570411_81570523_81571140
ES.12356.13	chr15	+	3296	16	NIC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	173.100535977089	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548135	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.14	chr15	+	3428	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_3	169.090536030258	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATGTGATGATATCA	NA	False	NA	10	True	AATAAA	-17	NA	81548135	81572509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554333_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.16	chr15	+	3359	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_9	173.788709516918	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTGATGATATCAGAT	NA	False	NA	13	True	AATAAA	-20	NA	81548136	81572512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.19	chr15	+	3848	16	NIC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	631	junction_14	41.3830883332793	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548137	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.20	chr15	+	3554	17	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_16	168.481082024066	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548137	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570648_81571140
ES.12356.21	chr15	+	3291	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3	-14	intron_retention	FALSE	canonical	0	0	junction_5	173.609395547079	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATAAAATCTTTG	NA	False	NA	-13	True	NA	NA	NA	81548137	81572486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.22	chr15	+	3414	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3	3	intron_retention	FALSE	canonical	2	2	junction_5	168.462486551161	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATGTGATGATATCA	NA	False	NA	10	True	AATAAA	-17	NA	81548137	81572509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559733_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.23	chr15	+	2450	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	48	989	3	139	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCACCCTGCACCGCC	NA	False	NA	NA	False	AATAAA	-20	NA	81548137	81571527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.25	chr15	+	3766	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3	-3	intron_retention	FALSE	canonical	3	631	junction_14	41.7439816021424	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548137	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.26	chr15	+	4643	15	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	631	junction_13	42.582692661288	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548137	81572516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566849_81567153_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.28	chr15	+	3288	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3	-3	intron_retention	FALSE	canonical	2	32	junction_11	166.360572251961	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548137	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.29	chr15	+	3324	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_15	174.005236191967	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548138	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81571140
ES.12356.3	chr15	+	3417	17	FSM	ENSMUSG00000022394.15	ENSMUST00000172748.8	3368	17	-52	3	15	-3	multi-exon	FALSE	canonical	3	9	junction_16	166.366864470513	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548104	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571192
ES.12356.33	chr15	+	4522	15	NIC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	631	junction_13	42.2910831533754	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548139	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.35	chr15	+	672	3	ISM	ENSMUSG00000022394.15	ENSMUST00000174274.8	970	8	-60	13086	7	-1390	5prime_fragment	FALSE	canonical	3	658	junction_2	72	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCGTACAGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	81548141	81553180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81548226_81551359_81551598_81552830
ES.12356.36	chr15	+	3554	20	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	7	39919	intron_retention	FALSE	non_canonical	0	0	junction_17	249.696502759459	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACCAACCAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	81548141	81612435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140_81572518_81591026_81591079_81611732_81611765_81612401
ES.12356.37	chr15	+	3661	18	NNC	ENSMUSG00000022394.15	novel	3727	17	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_7	259.171757720628	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548142	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560581_81561025_81561115_81566120_81566353_81566432_81566676_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.38	chr15	+	3923	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	58	-494	-7	494	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCTGTATTGTA	NA	False	NA	NA	False	NA	NA	NA	81548147	81573010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.4	chr15	+	3433	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-10	-3	intron_retention	FALSE	non_canonical	0	0	junction_12	169.179072564398	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548124	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568176_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.40	chr15	+	4199	16	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	29	junction_9	166.067456173689	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548148	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566775_81566849_81567153_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.41	chr15	+	3218	16	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-6	3	intron_retention	FALSE	canonical	0	0	junction_10	174.115210899756	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATGTGATGATATCA	NA	False	NA	10	True	AATAAA	-17	NA	81548148	81572509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566854_81568146_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.43	chr15	+	3448	18	NNC	ENSMUSG00000022394.15	novel	3727	17	NA	NA	-6	3	intron_retention	FALSE	canonical	0	0	junction_9	220.98829604669	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATGTGATGATATCA	NA	False	NA	10	True	AATAAA	-17	NA	81548148	81572509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566644_81566676_81566775_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.44	chr15	+	4499	15	NNC	ENSMUSG00000022394.15	novel	4645	16	NA	NA	-6	0	intron_retention	FALSE	canonical	2	29	junction_8	230.317095079185	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548148	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566775_81566849_81567153_81567259_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.45	chr15	+	3853	16	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	29	junction_9	166.729108303126	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548148	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566775_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569648_81570411_81570523_81571140
ES.12356.47	chr15	+	3416	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-6	-3	intron_retention	FALSE	canonical	0	0	junction_12	169.179072564398	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATATCAGATG	NA	False	NA	14	True	AATAAA	-21	NA	81548148	81572513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568197_81568515_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.52	chr15	+	3349	17	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_8	169.18202798687	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548178	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561076_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.53	chr15	+	3695	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-20	-5	intron_retention	FALSE	canonical	3	631	junction_14	40.8703097886745	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGTGATGATATCAGA	NA	False	NA	12	True	AATAAA	-19	NA	81548181	81572511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.54	chr15	+	3298	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_14	169.160784739697	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGATGATATCAGATGA	NA	False	NA	15	True	AATAAA	-22	NA	81548181	81572514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569055_81569581_81569648_81570411_81570523_81571140
ES.12356.55	chr15	+	3047	14	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_5	249.143574490813	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548183	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569652_81570409_81570523_81571140
ES.12356.56	chr15	+	3894	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-1476	-2	intron_retention	FALSE	canonical	0	0	junction_1	262.93559097239	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGATGATATCAGATGA	NA	False	NA	15	True	AATAAA	-22	NA	81551402	81572514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81551598_81552261_81552965_81554327_81554452_81554904_81554924_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.57	chr15	+	3965	14	NIC	ENSMUSG00000022394.15	novel	4645	16	NA	NA	-990	0	intron_retention	FALSE	canonical	0	0	junction_2	180.712265983588	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81551888	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81552965_81554327_81554452_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.58	chr15	+	3675	14	NNC	ENSMUSG00000022394.15	novel	4645	16	NA	NA	-823	0	intron_retention	FALSE	canonical	0	0	junction_8	180.349922857084	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81552055	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566854_81568146_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.59	chr15	+	2976	14	ISM	ENSMUSG00000022394.15	ENSMUST00000172620.8	4645	16	6170	-4	1377	4	3prime_fragment	FALSE	canonical	3	631	junction_12	27.2153367830166	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGTGATGATATCAG	NA	False	NA	11	True	AATAAA	-18	NA	81554324	81572510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.6	chr15	+	3464	17	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_15	169.175897736646	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548124	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570389_81570523_81571140
ES.12356.61	chr15	+	2648	11	ISM	ENSMUSG00000022394.15	ENSMUST00000172620.8	4645	16	12303	0	735	0	3prime_fragment	FALSE	canonical	3	631	junction_9	29.0131004892617	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81560457	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.62	chr15	+	7597	4	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	3229	0	intron_retention	FALSE	canonical	3	631	junction_3	32.2593655651606	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81562951	81572516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81566353_81566771_81567259_81568043_81569648_81570411
ES.12356.63	chr15	+	2212	9	NNC	ENSMUSG00000022394.15	novel	4645	16	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_2	224.207737098879	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81566312	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81566353_81566771_81566849_81567172_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.64	chr15	+	3488	1	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	-1204	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	710	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81569018	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81569000_81572500
ES.12356.65	chr15	+	1269	1	Antisense	novelGene_ENSMUSG00000063765.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTTTGTTGTTGCT	NA	False	NA	NA	False	TTTAAA	-27	NA	81578473	81579742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81578500_81579700
ES.12356.66	chr15	+	1060	1	Antisense	novelGene_ENSMUSG00000022391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCTAAAAAAAAAAA	1003	False	NA	NA	False	NA	NA	NA	81589957	81591017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81590000_81591000
ES.12356.67	chr15	+	2638	3	Antisense	novelGene_ENSMUSG00000022391.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGAGAAGTGTGGCC	4846	False	NA	NA	False	NA	NA	NA	81593800	81597401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_81595940_81596219_81596342_81597024
ES.12356.7	chr15	+	4685	16	FSM	ENSMUSG00000022394.15	ENSMUST00000172620.8	4645	16	-30	-10	-10	0	multi-exon	FALSE	canonical	3	631	junction_14	41.7399355799961	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548124	81572516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81548226_81551359_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12356.9	chr15	+	3245	16	NNC	ENSMUSG00000022394.15	novel	2578	18	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_10	174.115210899756	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548127	81572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566863_81568146_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ES.12357.1	chr15	-	179	1	Intergenic	novelGene_10337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACTTTTTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	81437621	81437442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81437400_81437600
ES.12357.10	chr15	-	195	1	Intergenic	novelGene_10341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAGTACATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	81544105	81543910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81543900_81544100
ES.12357.11	chr15	-	207	1	Intergenic	novelGene_10343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATATACGGCGGTTAAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	81551107	81550900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81550900_81551100
ES.12357.12	chr15	-	176	2	Antisense	novelGene_ENSMUSG00000022394.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81555077	81550929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81551079_81555050
ES.12357.13	chr15	-	208	1	Intergenic	novelGene_10344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATCAGATATAGGATG	NA	False	NA	NA	False	NA	NA	NA	81555079	81554871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81554900_81555100
ES.12357.2	chr15	-	177	2	Intergenic	novelGene_10338	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACTTTTTAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	81555077	81437443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81437592_81555048
ES.12357.3	chr15	-	2311	1	FSM	ENSMUSG00000103520.2	ENSMUST00000192082.2	855	1	-1454	-2	-1454	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACCTTGTGTGTCTCTG	NA	False	NA	NA	False	AATAAA	-29	NA	81470683	81468372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81468400_81470700
ES.12357.4	chr15	-	2907	13	Antisense	novelGene_ENSMUSG00000055024.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCATTAATGCCG	3530	False	NA	NA	False	NA	NA	NA	81510740	81483178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81483266_81484641_81485745_81492395_81492574_81494554_81494816_81495608_81495725_81497370_81497617_81500232_81500327_81500926_81501063_81504196_81504319_81505262_81505438_81507648_81507724_81508723_81508835_81510537
ES.12357.5	chr15	-	4419	13	Antisense	novelGene_ENSMUSG00000055024.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2727	False	NA	NA	False	NA	NA	NA	81511543	81483218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81485745_81492395_81492574_81494554_81494816_81495608_81495725_81497370_81497617_81500232_81500327_81500926_81501063_81504196_81504319_81505262_81505438_81507648_81507724_81508723_81508835_81510537_81510675_81511301
ES.12357.6	chr15	-	2033	12	Antisense	novelGene_ENSMUSG00000055024.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAATGAAAGACTCAGGA	2727	False	NA	NA	False	AATAAA	-40	NA	81511543	81492262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81492568_81494546_81494816_81495608_81495725_81497370_81497617_81500232_81500327_81500926_81501063_81504196_81504319_81505262_81505438_81507648_81507729_81508723_81508835_81510537_81510675_81511301
ES.12357.7	chr15	-	5668	4	Antisense	novelGene_ENSMUSG00000055024.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAACCAAAAAAA	3530	False	NA	NA	False	NA	NA	NA	81510740	81499127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81500327_81500926_81501063_81504196_81505438_81507648
ES.12357.8	chr15	-	2412	6	Antisense	novelGene_ENSMUSG00000055024.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	3530	False	NA	NA	False	NA	NA	NA	81510740	81499735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81500327_81500927_81501063_81504196_81504319_81505262_81505438_81507648_81508835_81510537
ES.12357.9	chr15	-	160	1	Intergenic	novelGene_10340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	81541426	81541266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81541300_81541400
ES.12358.1	chr15	-	1157	5	NNC	ENSMUSG00000063765.13	novel	2548	6	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.3047319227625	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATACCTAGCATTAGT	8252	False	NA	NA	False	NA	NA	NA	81578231	81570371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81570604_81572415_81572478_81576308_81576508_81577187_81577355_81577734
ES.12358.2	chr15	-	2546	1	NIC	ENSMUSG00000063765.13	novel	2548	6	NA	NA	5312	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATACCTAGCATTAGT	NA	False	NA	NA	False	NA	NA	NA	81572917	81570371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81570400_81572900
ES.12358.3	chr15	-	1219	5	NNC	ENSMUSG00000063765.13	novel	2548	6	NA	NA	-23	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.3785564992297	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAAAAAAAACA	8231	False	NA	NA	False	NA	NA	NA	81578252	81570406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81570604_81576308_81576508_81576802_81576941_81577187_81577355_81577734
ES.12358.4	chr15	-	1775	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2542	41	-538	-25	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAAAAAAAACA	7537	False	NA	NA	False	NA	NA	NA	81578946	81570406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
ES.12358.5	chr15	-	1041	3	FSM	ENSMUSG00000063765.13	ENSMUST00000173898.2	1095	3	29	25	29	-25	multi-exon	FALSE	canonical	3	12	junction_2	12.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAAAAAAAACA	8104	False	NA	NA	False	NA	NA	NA	81578379	81570406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81570604_81576308_81576508_81577734
ES.12358.6	chr15	-	3386	1	FSM	ENSMUSG00000063765.13	ENSMUST00000230849.2	1412	1	1280	-3254	-48	3254	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTCTTTCAGTGTG	8027	False	NA	NA	False	NA	NA	NA	81578456	81575070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81575100_81578500
ES.12358.7	chr15	-	3227	3	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2131	4705	379	3254	internal_fragment	FALSE	canonical	3	19	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTCTTTCAGTGTG	7126	False	NA	NA	False	NA	NA	NA	81579357	81575070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81576508_81577187_81577355_81577734
ES.12358.8	chr15	-	2787	2	ISM	ENSMUSG00000063765.13	ENSMUST00000173898.2	1095	3	-703	4716	625	3227	5prime_fragment	FALSE	canonical	3	12	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCGGTGGCCTGTGCC	7372	False	NA	NA	False	AATAAA	-19	NA	81579111	81575097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81576508_81577734
ES.12359.1	chr15	-	169	1	Intergenic	novelGene_10345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCAGTGGTGATGGCA	3244	False	NA	NA	False	AATAAA	-25	NA	81583239	81583070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81583100_81583200
ES.1236.1	chr1	-	2241	3	Antisense	novelGene_ENSMUSG00000036155.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAAGTCTGCGTCTCT	NA	False	NA	NA	False	NA	NA	NA	127412070	127403544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127405502_127405998_127406165_127411952
ES.1236.2	chr1	-	1258	1	Antisense	novelGene_ENSMUSG00000036155.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGGGAGCAACTGCCTG	NA	False	NA	NA	False	NA	NA	NA	127412003	127410745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127410700_127412000
ES.12360.1	chr15	-	3279	3	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	13	714	intron_retention	FALSE	canonical	3	846	junction_1	27.5	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCTACATGTGTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	81594648	81587734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589950_81590601_81590705_81593687
ES.12360.11	chr15	-	4940	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	698	junction_14	53.4073678323086	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614070	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.12	chr15	-	3970	13	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	698	junction_12	50.2756291744707	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614108	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.13	chr15	-	3690	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-5	0	intron_retention	FALSE	canonical	3	698	junction_14	53.3582424824537	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614107	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.15	chr15	-	2170	10	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-6243	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	259.738092206765	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81600904	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589808_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767
ES.12360.16	chr15	-	5814	14	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	698	junction_13	55.1963681165205	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614070	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81606228_81608686_81608834_81613912
ES.12360.18	chr15	-	5396	12	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	39	-1	intron_retention	FALSE	canonical	3	698	junction_11	52.3885672973701	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614165	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595943_81596222_81596337_81597019_81597179_81600767_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.2	chr15	-	2963	17	FSM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	21	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	270.05335121046	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGCTTCTTTCATCAA	NA	False	NA	-4	True	AATAAA	-25	NA	81614081	81588448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613417_81613466_81613912
ES.12360.20	chr15	-	3109	17	FSM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	-9	-357	9	-1	multi-exon	FALSE	canonical	0	0	junction_16	273.319410214496	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614072	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81610274_81610484_81613912
ES.12360.21	chr15	-	2987	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	7	-1	intron_retention	FALSE	canonical	3	698	junction_14	49.7694685525172	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614074	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.23	chr15	-	2762	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_14	211.913054947407	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614081	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81613912
ES.12360.24	chr15	-	2982	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	698	junction_14	53.4354942039121	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614071	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.25	chr15	-	2921	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	208.315743257414	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614081	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595830_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.27	chr15	-	7992	15	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	215.573889979321	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	False	NA	-10	True	AATAAA	-19	NA	81614081	81588454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594557_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686
ES.12360.28	chr15	-	3419	10	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-6134	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	260.554110396371	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGCCCGGAAGCTTCTT	NA	False	NA	-11	True	AATAAA	-18	NA	81600795	81588455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590899_81593333_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767
ES.12360.29	chr15	-	2739	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	210.521376586797	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGCCCGGAAGCTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	81614072	81588456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.3	chr15	-	3162	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	-124	-5	-124	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGCTTCTTTCATCAA	NA	False	NA	-4	True	AATAAA	-25	NA	81614328	81588448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.30	chr15	-	2906	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	209.015725086256	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGCCCGGAAGCTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	81614086	81588456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606222_81608686_81608834_81613912
ES.12360.32	chr15	-	2811	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	2	27	junction_4	205.739432986762	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAGGCCCGGAAGCTT	NA	False	NA	-14	True	AATAAA	-15	NA	81614107	81588458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.33	chr15	-	4092	13	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	-7	intron_retention	FALSE	canonical	3	698	junction_12	50.4609309818552	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGAGGCCCGGAAGC	NA	False	NA	-16	True	AATAAA	-13	NA	81614071	81588460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589950_81590601_81590705_81593687_81593808_81594561_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.34	chr15	-	3048	16	NNC	ENSMUSG00000022391.17	novel	2984	17	NA	NA	-201	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	274.840996456739	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGAGGCCCGGAAGC	NA	False	NA	-16	True	AATAAA	-13	NA	81613801	81588460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613417
ES.12360.36	chr15	-	2507	13	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	231.333633525262	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGAGGCCCGGAAGC	NA	False	NA	-16	True	AATAAA	-13	NA	81614081	81588460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81613973
ES.12360.37	chr15	-	2665	15	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	280.746163220916	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGAGGCCCGGAAGC	NA	False	NA	-16	True	AATAAA	-13	NA	81614072	81588460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.38	chr15	-	2693	15	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	4800	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	215.573889979321	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGCAGAGGCCCGGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	81608800	81588461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593801_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686
ES.12360.39	chr15	-	2943	15	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	27	junction_5	208.6551201952	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGCAGAGGCCCGGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	81614109	81588461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.4	chr15	-	4519	15	NNC	ENSMUSG00000022391.17	novel	2984	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	27	junction_5	208.771296115229	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGCTTCTTTCATCAA	NA	False	NA	-4	True	AATAAA	-25	NA	81614071	81588448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.41	chr15	-	5507	15	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	-8	intron_retention	FALSE	canonical	1	4	junction_10	214.961458339463	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGCAGAGGCCCGGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	81614071	81588461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81601082_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.42	chr15	-	5687	14	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	698	junction_13	55.1447798577719	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGCAGAGGCCCGGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	81614071	81588461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.43	chr15	-	2867	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	209.015725086256	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGCAGAGGCCCGGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	81614107	81588461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608747_81608834_81613912
ES.12360.44	chr15	-	4586	12	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	-9	intron_retention	FALSE	canonical	3	698	junction_11	51.3526134592088	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGCAGAGGCCCGGAA	NA	False	NA	-18	True	AATAAA	-11	NA	81614081	81588462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.45	chr15	-	5794	13	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	8	-9	intron_retention	FALSE	canonical	3	698	junction_12	53.494548008808	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGCAGAGGCCCGGAA	NA	False	NA	-18	True	AATAAA	-11	NA	81614094	81588462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.46	chr15	-	2596	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	110	327	8	31	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTGACTTGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	81614094	81588780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.47	chr15	-	2346	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	97	590	-5	-232	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCCTGGGGAATTCT	NA	False	NA	17	True	NA	NA	NA	81614107	81589043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.48	chr15	-	2194	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	9	-279	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	202.347182392595	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATAGGCCCCGTTGGCT	NA	False	NA	-30	True	ATTAAA	-14	NA	81614072	81589090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.49	chr15	-	4292	11	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	9	1726	intron_retention	FALSE	canonical	3	698	junction_10	44.1521233917464	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTTAACTATTT	NA	False	NA	NA	False	NA	NA	NA	81614072	81591730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.5	chr15	-	2841	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	202.347182392595	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCGGAAGCTTCTTTCA	NA	False	NA	-8	True	AATAAA	-21	NA	81614081	81588452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.50	chr15	-	4524	4	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	8793	-917	intron_retention	FALSE	canonical	3	764	junction_2	14.142135623731	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTACGCAGAGCTGA	NA	False	NA	NA	False	AATAAA	-10	NA	81604807	81594373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81595943_81596222_81597179_81600767_81600903_81602943
ES.12360.51	chr15	-	9443	4	NNC	ENSMUSG00000022391.17	novel	1685	6	NA	NA	-5	-795	intron_retention	FALSE	canonical	0	0	junction_1	364.45606350042	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGTGGAAGTGTAGCCC	NA	False	NA	NA	False	AAGAAA	-2	NA	81614107	81597816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81598603_81599139_81604868_81606099_81608834_81613912
ES.12360.52	chr15	-	6949	5	NNC	ENSMUSG00000022391.17	novel	1685	6	NA	NA	9	-795	intron_retention	TRUE	canonical	0	0	junction_1	335.593876582991	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGTGGAAGTGTAGCCC	NA	False	NA	NA	False	AAGAAA	-2	NA	81614072	81597816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81598603_81599139_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.53	chr15	-	537	2	NNC	ENSMUSG00000022391.17	novel	1685	6	NA	NA	-2	-5474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81614083	81608464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81608834_81613915
ES.12360.55	chr15	-	3724	2	NNC	ENSMUSG00000022391.17	novel	2743	17	NA	NA	-14	-6783	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	81613614	81609773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81611640_81611756
ES.12360.6	chr15	-	2907	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	208.423244598315	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614109	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603093_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.7	chr15	-	2921	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	208.84418434166	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614081	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602932_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.8	chr15	-	2888	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	206.478624129042	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614071	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81589460_81589653_81589764_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12360.9	chr15	-	3737	14	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	-8	0	intron_retention	FALSE	canonical	3	698	junction_13	55.2345188356513	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614071	81588453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81594755_81595674_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ES.12361.1	chr15	+	159	1	Intergenic	novelGene_10346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATCTTTAA	1886	False	NA	NA	False	NA	NA	NA	81618705	81618864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81618700_81618900
ES.12362.1	chr15	+	175	1	Intergenic	novelGene_10347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAGAGAG	26	False	NA	NA	False	NA	NA	NA	81626402	81626577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81626400_81626600
ES.12363.1	chr15	-	178	1	Intergenic	novelGene_10348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81627028	81626850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81626800_81627000
ES.12364.10	chr15	+	5626	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	17	97	17	-97	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATATTAAATATCATAA	1965	False	NA	-93	True	ATTAAA	-18	NA	81629274	81680364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.11	chr15	+	3467	16	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	11816	18	0	5prime_fragment	FALSE	canonical	3	185	junction_12	28.9845936087893	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAGAAAAAAAA	1966	False	NA	NA	False	NA	NA	NA	81629275	81668645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225
ES.12364.12	chr15	+	2534	17	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	18	10074	18	1730	5prime_fragment	FALSE	canonical	3	185	junction_12	29.7192593279173	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGGGGGGGCGTTTC	1966	False	NA	NA	False	TATAAA	-32	NA	81629275	81670387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082
ES.12364.14	chr15	+	5351	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	23	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	65.8343283566418	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGTTCTATAGAATAT	1971	False	NA	13	True	AATAAA	-24	NA	81629280	81680470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701_81678180_81678554
ES.12364.15	chr15	+	4449	15	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	32	11785	32	19	intron_retention	FALSE	canonical	3	185	junction_12	28.7828782722064	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAATATAGTCATAT	1980	False	NA	NA	False	NA	NA	NA	81629289	81668676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159
ES.12364.16	chr15	+	5060	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-27	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	65.3219142351083	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGGTATCCAAGG	1985	False	NA	NA	False	NA	NA	NA	81629294	81679730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667496_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.17	chr15	+	5565	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.802178312535	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTTTTAGCCTTTGTT	1989	False	NA	2	True	AATAAA	-13	NA	81629298	81680459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653316_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.18	chr15	+	3709	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-6	-735	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_23	64.7004147382131	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTGTGTGGTATCC	2006	False	NA	NA	False	NA	NA	NA	81629315	81679726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701_81677973_81679210
ES.12364.2	chr15	+	4932	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-13	-669	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	66.73057026779	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGCAGACATCCT	1935	False	NA	NA	False	GATAAA	-14	NA	81629244	81679792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81661133_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.20	chr15	+	5029	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	13	-736	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.5413512417012	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATATGTGTGTGGTATC	2025	False	NA	NA	False	NA	NA	NA	81629334	81679725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655023_81655126_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.21	chr15	+	3627	15	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	15	19	intron_retention	FALSE	canonical	1	1	junction_1	62.7061904960795	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAATATAGTCATAT	2027	False	NA	NA	False	NA	NA	NA	81629336	81668676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629429_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225
ES.12364.22	chr15	+	5608	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.3329192142263	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	2041	False	NA	4	True	AATAAA	-15	NA	81629350	81680461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655869_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664626_81664733_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.23	chr15	+	5620	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.2581833172774	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	2041	False	NA	4	True	AATAAA	-15	NA	81629350	81680461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656683_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.24	chr15	+	5596	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.9309391546444	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTTAGCCTTTGTTC	2056	False	NA	3	True	AATAAA	-14	NA	81629365	81680460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677255_81677385_81677701
ES.12364.25	chr15	+	4417	15	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	21756	11776	-8966	28	internal_fragment	FALSE	canonical	3	185	junction_11	25.9544341695446	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCATATGTTGTAAAG	2210	False	NA	NA	False	NA	NA	NA	81651013	81668685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225
ES.12364.26	chr15	+	3581	13	ISM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	32804	734	-806	-734	3prime_fragment	FALSE	canonical	3	112	junction_11	50.7796848049384	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTGTGGTATCCA	NA	False	NA	NA	False	NA	NA	NA	81662061	81679727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.27	chr15	+	3218	3	ISM	ENSMUSG00000022390.12	ENSMUST00000230368.2	4732	15	33994	-24	498	24	3prime_fragment	FALSE	canonical	3	197	junction_2	15.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATAGTCATATGTTGT	NA	False	NA	NA	False	NA	NA	NA	81663365	81668681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81663472_81664604_81666261_81667225
ES.12364.28	chr15	+	176	1	Intergenic	novelGene_10352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	81674005	81674181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81674000_81674200
ES.12364.3	chr15	+	5092	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	-13	661	-13	-661	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACATCCTTGTGAATT	1935	False	NA	NA	False	GATAAA	-22	NA	81629244	81679800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.4	chr15	+	3588	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	-10	-653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	65.3827415497544	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGAATTTTGAGTGC	1938	False	NA	NA	False	GATAAA	-30	NA	81629247	81679808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81679210
ES.12364.5	chr15	+	5766	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	-4	-22	-4	22	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATACGTGTGCACTAT	1944	False	NA	26	True	AATAAA	-37	NA	81629253	81680483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.6	chr15	+	5946	22	NIC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	112	junction_20	51.3629210604688	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1950	False	NA	4	True	AATAAA	-15	NA	81629259	81680461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81677115_81677220_81677385_81677701
ES.12364.7	chr15	+	5617	23	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	64.3525285741306	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1952	False	NA	4	True	AATAAA	-15	NA	81629261	81680461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629429_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ES.12364.8	chr15	+	4485	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_23	64.7004147382131	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1965	False	NA	4	True	AATAAA	-15	NA	81629274	81680461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701_81677973_81679210
ES.12364.9	chr15	+	4476	24	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	65.8343283566418	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTAGCCTTTGTTCTA	1965	False	NA	5	True	AATAAA	-16	NA	81629274	81680462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701_81677963_81679210
ES.12365.1	chr15	-	139	1	Intergenic	novelGene_10349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAACAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	81633617	81633478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81633500_81633600
ES.12366.1	chr15	-	177	1	Intergenic	novelGene_10350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	81655368	81655191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81655200_81655400
ES.12367.1	chr15	-	171	1	Intergenic	novelGene_10351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	81655682	81655511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81655500_81655700
ES.12368.1	chr15	+	4194	5	NNC	ENSMUSG00000022389.16	novel	4403	4	NA	NA	-185	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.6019662378358	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTGGTCTTTTCTG	NA	False	NA	17	True	ATTAAA	-17	NA	81686436	81711064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81686519_81686912_81687088_81699144_81699463_81705399_81705621_81707666
ES.12368.10	chr15	+	4346	4	NNC	ENSMUSG00000022389.16	novel	791	2	NA	NA	-350	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2960963117119	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGCAGTGGTCTTT	NA	False	NA	13	True	ATTAAA	-13	NA	81696009	81711060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81696423_81699144_81699463_81705399_81705621_81707666
ES.12368.11	chr15	+	4389	2	FSM	ENSMUSG00000022389.16	ENSMUST00000168632.2	791	2	-516	-3082	-166	-2	multi-exon	FALSE	canonical	3	69	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCAGTGGTCTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	81704627	81711062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81705621_81707666
ES.12368.2	chr15	+	4403	4	FSM	ENSMUSG00000022389.16	ENSMUST00000109553.10	4403	4	-3	3	-3	-3	multi-exon	FALSE	canonical	2	3	junction_1	32.8870119584549	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCAGTGGTCTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	81686618	81711061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81687088_81699144_81699463_81705399_81705621_81707666
ES.12368.3	chr15	+	4343	4	NNC	ENSMUSG00000022389.16	novel	4079	4	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2960963117119	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCAGTGGTCTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	81695236	81711062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81695645_81699144_81699463_81705399_81705621_81707666
ES.12368.4	chr15	+	4582	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	-334	-169	34	4	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTCTTTTCTGTTAT	NA	False	NA	21	True	ATTAAA	-21	NA	81695280	81711068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
ES.12368.5	chr15	+	4279	5	NNC	ENSMUSG00000022389.16	novel	4079	4	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.8206918573749	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGCAGTGGTCTTT	NA	False	NA	13	True	ATTAAA	-13	NA	81695670	81711060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81695922_81699144_81699463_81700164_81700260_81705399_81705621_81707666
ES.12368.6	chr15	+	1401	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	58	2620	58	299	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCGTCTCAGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	81695672	81708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
ES.12368.7	chr15	+	3842	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	58	179	58	-179	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTCCAGGTAGAGAT	NA	False	NA	NA	False	AATAAA	-21	NA	81695672	81710720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
ES.12368.8	chr15	+	3724	4	NNC	ENSMUSG00000022389.16	novel	4079	4	NA	NA	71	-182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.8094638358646	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGATTTCCAGGTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	81695685	81710717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81695922_81699144_81699467_81705505_81705621_81707666
ES.12368.9	chr15	+	4436	4	NIC	ENSMUSG00000022389.16	novel	791	2	NA	NA	-366	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.2960963117119	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTGGTCTTTTCTG	NA	False	NA	17	True	ATTAAA	-17	NA	81695993	81711064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81696493_81699144_81699463_81705399_81705621_81707666
ES.12369.1	chr15	-	1121	2	FSM	ENSMUSG00000097613.2	ENSMUST00000181220.2	1115	2	-7	1	-7	-1	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTCATGTATTTATTTT	7397	False	NA	NA	False	NA	NA	NA	81686821	81684992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81685903_81686610
ES.1237.1	chr1	-	1842	7	NNC	ENSMUSG00000026347.14	novel	3488	8	NA	NA	216	208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.47767812455308	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGGGGAGGTTGTA	NA	False	NA	NA	False	TATAAA	-16	NA	127605542	127418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127419398_127423454_127423597_127427920_127428033_127447081_127447179_127479062_127479119_127596418_127596508_127605167
ES.1237.2	chr1	-	1212	4	NNC	ENSMUSG00000026347.14	novel	514	5	NA	NA	-8040	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.62466929133727	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAATCTGCATATCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	127436121	127418633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127419398_127423454_127423597_127427920_127428033_127435927
ES.1237.3	chr1	-	1749	8	FSM	ENSMUSG00000026347.14	ENSMUST00000185560.2	3488	8	1739	0	212	0	multi-exon	FALSE	canonical	2	4	junction_7	2.65729646253404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGAATCTGCATATCTC	NA	False	NA	NA	False	AATAAA	-15	NA	127605546	127418634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_127419398_127423454_127423597_127427920_127428033_127447081_127447179_127479062_127479155_127480497_127480542_127596387_127596508_127605167
ES.12370.1	chr15	+	2874	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	53	-9	53	9	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGATTGATGTCTACTA	NA	False	NA	28	True	AAAAAG	-25	NA	81756562	81799343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.10	chr15	+	2614	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	2	39	junction_15	470.793607745209	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756678	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81798438_81798561_81798828
ES.12370.11	chr15	+	2061	15	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-4	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	521.833468040664	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756680	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794648_81797985_81798014_81798438_81798561_81798828
ES.12370.12	chr15	+	2662	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-2	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	477.402523611023	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756682	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794664_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.13	chr15	+	2868	17	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	intron_retention	FALSE	canonical	0	0	junction_11	490.912925069202	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796150_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.14	chr15	+	2771	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	476.297862664991	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756684	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788026_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.15	chr15	+	2917	19	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	628.121137663944	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81766108_81766315_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.16	chr15	+	1514	9	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	669.610322781093	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTCTGCCTGAGTGA	NA	False	NA	15	True	AAAAAG	-12	NA	81756684	81799330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773608_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.17	chr15	+	2618	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	488.35229583135	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.18	chr15	+	2647	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	478.98465275816	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796150_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.19	chr15	+	2877	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	473.669471431387	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797714_81798014_81798438_81798561_81798828
ES.12370.2	chr15	+	10798	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	138	-8018	-37	8018	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTACACATCC	NA	False	NA	NA	False	NA	NA	NA	81756647	81807352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.20	chr15	+	2729	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	476.297862664991	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATGTTCTGCCTGAGT	NA	False	NA	13	True	AAAAAG	-10	NA	81756684	81799328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787828_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.21	chr15	+	2649	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	94	0	-94	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTATTCTGCCTGAT	NA	False	NA	-32	True	NA	NA	NA	81756684	81799240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.22	chr15	+	870	4	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	175	15596	0	4256	5prime_fragment	FALSE	canonical	3	1775	junction_1	134.508983590936	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGCGTTAAGACCAGT	NA	False	NA	NA	False	ATTAAA	-25	NA	81756684	81783738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329
ES.12370.23	chr15	+	350	3	FSM	ENSMUSG00000022477.14	ENSMUST00000157003.8	351	3	0	1	0	0	multi-exon	FALSE	canonical	3	8	junction_2	883.5	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTAGCCTATGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	81756684	81773889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81756750_81773498_81773581_81773686
ES.12370.24	chr15	+	2813	19	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	5109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	465.500832105978	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATCAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	81756684	81804443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828_81799336_81804374
ES.12370.25	chr15	+	2726	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	478.914718878505	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791611_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.26	chr15	+	2704	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	478.673664941629	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783416_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.29	chr15	+	2698	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	478.733717549056	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756684	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773511_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.32	chr15	+	4559	7	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-980	intron_retention	FALSE	canonical	3	1775	junction_1	108.63343050011	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81756684	81793384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81790145_81791626
ES.12370.33	chr15	+	3191	17	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_6	487.630138879612	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTCTGCCTGAGTGAT	NA	False	NA	16	True	AAAAAG	-13	NA	81756684	81799331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788277_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81798014_81798438_81798561_81798828
ES.12370.34	chr15	+	4706	15	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	2	intron_retention	FALSE	canonical	3	1727	junction_7	141.77909304439	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCTGAGTGATTGATG	NA	False	NA	21	True	AAAAAG	-18	NA	81756684	81799336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.35	chr15	+	2634	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	5	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	478.994477361233	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756689	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796218_81796486_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.37	chr15	+	4062	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	10	-32	intron_retention	FALSE	canonical	3	1727	junction_10	139.59355062108	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756694	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.38	chr15	+	2612	19	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	10	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	465.500832105978	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756694	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779421_81779509_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.39	chr15	+	2781	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_12	474.923676257455	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756698	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794780_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.40	chr15	+	4074	13	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_5	555.171570077415	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756701	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81789069_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796563_81797306_81797499_81797880_81798014_81798438
ES.12370.41	chr15	+	2705	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	641.174770639948	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756701	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783341_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797313_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.43	chr15	+	2546	17	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	491.387894132527	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756705	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793779_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.44	chr15	+	4172	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-3	-32	intron_retention	FALSE	canonical	3	1727	junction_9	140.466855521151	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756705	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.45	chr15	+	5155	16	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-2	-32	intron_retention	FALSE	canonical	3	1727	junction_8	137.34019400339	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756706	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.47	chr15	+	2702	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	478.741921069817	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756708	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790067_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.48	chr15	+	2651	17	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	16984	32	-6013	-32	3prime_fragment	FALSE	canonical	3	1727	junction_9	134.625855962924	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	1154	False	NA	-13	True	NA	NA	NA	81773493	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.49	chr15	+	2652	17	NNC	ENSMUSG00000022477.14	novel	703	4	NA	NA	-3290	-32	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	488.8619437019	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	3877	False	NA	-13	True	NA	NA	NA	81776216	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81776360_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.5	chr15	+	2669	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	83	junction_6	459.921506767778	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81756678	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788130_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.50	chr15	+	2252	15	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	26818	32	3821	-32	3prime_fragment	FALSE	canonical	3	1727	junction_7	137.792379310027	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	7020	False	NA	-13	True	NA	NA	NA	81783327	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.51	chr15	+	3691	12	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-3932	-32	intron_retention	FALSE	canonical	3	1727	junction_4	143.361589885664	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81787347	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81788208_81788963_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.52	chr15	+	1177	7	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	38101	170	121	-170	3prime_fragment	FALSE	canonical	3	1833	junction_3	159.10583479768	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCAGTTTGGTTTC	NA	False	NA	-34	True	NA	NA	NA	81794610	81799164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.53	chr15	+	1178	7	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	1670	5109	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	770.501712450329	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATCAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	81796159	81804443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828_81799308_81804397
ES.12370.54	chr15	+	627	2	ISM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	41928	2	3948	-2	3prime_fragment	FALSE	canonical	3	2183	junction_1	0	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGCCTGAGTGATT	NA	False	NA	17	True	AAAAAG	-14	NA	81798437	81799332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81798561_81798828
ES.12370.55	chr15	+	135	1	Intergenic	novelGene_10354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1454	False	NA	NA	False	NA	NA	NA	81804253	81804388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81804300_81804400
ES.12370.6	chr15	+	2970	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1727	junction_9	139.566964214315	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756678	81799334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.7	chr15	+	2986	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-6	-32	intron_retention	FALSE	canonical	0	0	junction_7	641.757534871242	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	False	NA	-13	True	NA	NA	NA	81756678	81799302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81788208_81788963_81789069_81789150_81789199_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ES.12370.8	chr15	+	2706	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	-6	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	471.219789445857	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAAAAAAAGAT	NA	False	NA	-14	True	NA	NA	NA	81756678	81799301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798544_81798821
ES.12371.11	chr15	-	867	4	FSM	ENSMUSG00000061360.9	ENSMUST00000160415.2	471	4	-29	-367	-29	150	multi-exon	FALSE	canonical	3	15	junction_3	625.5474047229	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAACGTCTACTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	81755895	81749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81755793
ES.12371.12	chr15	-	971	5	NNC	ENSMUSG00000061360.9	novel	1663	4	NA	NA	1	149	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	625.552705613204	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGAACGTCTACTTT	NA	False	NA	-7	True	AATAAA	-19	NA	81756111	81749520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81750094_81751368_81751478_81754532_81754700_81755366_81755391_81756013
ES.12371.13	chr15	-	4460	4	NIC	ENSMUSG00000061360.9	novel	1663	4	NA	NA	-433	149	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	589.447764154439	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGAACGTCTACTTT	NA	False	NA	-7	True	AATAAA	-19	NA	81756545	81749520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81750094_81751368_81754700_81755366_81755391_81756013
ES.12371.14	chr15	-	472	3	ISM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	1	5629	1	-4463	5prime_fragment	FALSE	canonical	3	1228	junction_2	27.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGGCAGAATGGAAGAG	NA	False	NA	NA	False	AATAAA	-16	NA	81756111	81754349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81754700_81755366_81755391_81756013
ES.12371.15	chr15	-	179	1	Intergenic	novelGene_10353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	81771512	81771333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81771300_81771500
ES.12371.16	chr15	-	8433	1	Antisense	novelGene_ENSMUSG00000022477.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCGGGCGTGGTGGTG	NA	False	NA	NA	False	CATAAA	-33	NA	81787532	81779099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81779100_81787500
ES.12371.17	chr15	-	5810	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	32	-3300	32	3300	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGGGTTGGCTCTAAG	460	False	NA	NA	False	NA	NA	NA	81810409	81795929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.18	chr15	-	4239	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	28	-1725	28	1725	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACCTTGTAGTAGCGAG	456	False	NA	NA	False	NA	NA	NA	81810413	81797504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.19	chr15	-	5840	5	ISM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	22	-40	22	40	intron_retention	FALSE	canonical	3	256	junction_2	11.1887220003001	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAACCAAACTGAAC	450	False	NA	NA	False	AATAAA	-21	NA	81810419	81799189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609
ES.12371.2	chr15	-	4353	6	Fusion	ENSMUSG00000061360.9_ENSMUSG00000048546.9	novel	615	3	NA	NA	0	1	multi-exon	FALSE	canonical	0	0	junction_2	608.189246863178	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCCTACTTGTTTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	81756112	81732471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_81736074_81742136_81742462_81742723_81742860_81754532_81754700_81755366_81755391_81756013
ES.12371.20	chr15	-	2652	6	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	28	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	106.002641476522	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATACAGTTGCAT	456	False	NA	NA	False	AATAAA	-28	NA	81810413	81799218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81800867_81801400_81801603_81802341_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.21	chr15	-	2509	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	32	1	32	-1	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCTGTCATCAAAAATAA	460	False	NA	NA	False	AATAAA	-16	NA	81810409	81799230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.22	chr15	-	3047	5	NIC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	28	-1	intron_retention	FALSE	canonical	3	251	junction_4	13.0958008537088	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCTGTCATCAAAAATAA	456	False	NA	NA	False	AATAAA	-16	NA	81810413	81799230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.23	chr15	-	2171	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	30	341	30	-341	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACAGCTTTGTTTTTAA	458	False	NA	NA	False	NA	NA	NA	81810411	81799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.24	chr15	-	1351	6	NIC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	33	321	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	107.195895443809	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCCCTTTTCATTAGCT	461	False	NA	1	True	AATAAA	-20	NA	81810408	81800280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81800867_81801400_81801472_81802444_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.25	chr15	-	1481	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	9	1052	9	320	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCCCTTTTCATTAGC	437	False	NA	0	True	AATAAA	-19	NA	81810432	81800281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.26	chr15	-	2334	5	NIC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	22	320	intron_retention	FALSE	canonical	3	251	junction_4	12.619429464124	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCCCTTTTCATTAGC	450	False	NA	0	True	AATAAA	-19	NA	81810419	81800281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81800867_81801400_81802533_81802875_81802963_81806609_81806707_81809986
ES.12371.27	chr15	-	4130	6	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	27	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.566537547696	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCCCCTTTTCATTAGC	455	False	NA	0	True	AATAAA	-19	NA	81810414	81800281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81807319
ES.12371.28	chr15	-	4623	6	NNC	ENSMUSG00000022476.9	novel	2542	6	NA	NA	-20	319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	107.566537547696	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCCCCTTTTCATTAG	478	False	NA	-1	True	AATAAA	-18	NA	81810391	81800282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81807199_81807294
ES.12371.29	chr15	-	4711	5	ISM	ENSMUSG00000022476.9	ENSMUST00000230765.2	1290	6	-214	-485	-15	316	intron_retention	FALSE	canonical	3	256	junction_2	11.1887220003001	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAACCTCCCCTTTTCAT	483	False	NA	-4	True	AATAAA	-15	NA	81810386	81800285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609
ES.12371.3	chr15	-	1822	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	168	2161	6	1200	multi-exon	FALSE	canonical	3	45	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGGTCCAGATGTGAA	NA	False	NA	NA	False	NA	NA	NA	81742518	81734633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81736074_81742136
ES.12371.4	chr15	-	1646	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	21	-4	21	4	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAATTCATGGTCAT	NA	False	NA	NA	False	AATAAA	-26	NA	81756091	81748716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
ES.12371.5	chr15	-	1298	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	-433	798	-433	151	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAACGTCTACTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	81756545	81749518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
ES.12371.6	chr15	-	2154	2	ISM	ENSMUSG00000061360.9	ENSMUST00000160415.2	471	4	-246	-367	0	150	intron_retention	FALSE	canonical	3	1394	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAACGTCTACTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	81756112	81749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81750094_81754532
ES.12371.7	chr15	-	4626	1	NIC	ENSMUSG00000061360.9	novel	1663	4	NA	NA	1721	150	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAACGTCTACTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	81754145	81749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81749500_81754100
ES.12371.8	chr15	-	1267	5	Fusion	ENSMUSG00000061360.9_ENSMUSG00000022476.9	novel	1663	4	NA	NA	-20	150	multi-exon	FALSE	canonical	0	0	junction_3	614.212910968176	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAACGTCTACTTTT	478	False	NA	-6	True	AATAAA	-20	NA	81810391	81749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_81750094_81754532_81754700_81755366_81755391_81806609_81806707_81809986
ES.12372.1	chr15	+	140	1	Intergenic	novelGene_10355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTGAAAAAAAAATGACA	1490	False	NA	NA	False	NA	NA	NA	81813006	81813146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81813000_81813100
ES.12373.1	chr15	+	187	1	Intergenic	novelGene_10356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAGATTTAAAA	6597	False	NA	NA	False	NA	NA	NA	81842490	81842677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81842500_81842700
ES.12374.1	chr15	-	4107	7	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-18	2	intron_retention	FALSE	canonical	3	1009	junction_2	63.2308381162933	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTTGCTCTGTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	81845088	81835306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836241_81836925_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.10	chr15	-	5429	6	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1009	junction_2	67.4495366922561	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845060	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836241_81836925_81839950_81840369_81840462_81840562_81842112_81844915
ES.12374.12	chr15	-	1166	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	379.844973748018	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845065	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835748_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.13	chr15	-	1067	6	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	428.383659819093	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845081	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81844901
ES.12374.15	chr15	-	1116	7	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	414.390616850012	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845057	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840578_81840640_81841993_81842112_81844915
ES.12374.16	chr15	-	1257	8	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	382.492150112861	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845061	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836270_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.17	chr15	-	4500	6	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	30	junction_2	449.771230738472	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845036	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836270_81836925_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.18	chr15	-	1603	11	NNC	ENSMUSG00000022474.16	novel	927	9	NA	NA	-5756	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	502.877330966509	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	7907	False	NA	-5	True	ATTAAA	-12	NA	81850887	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915_81845176_81847837_81847935_81848578_81848652_81850796
ES.12374.19	chr15	-	3845	3	NNC	ENSMUSG00000022474.16	novel	1107	3	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	599.5	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845024	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81838200_81843757
ES.12374.20	chr15	-	1302	9	FSM	ENSMUSG00000022474.16	ENSMUST00000229385.2	1291	9	-13	2	3	-2	multi-exon	FALSE	canonical	3	23	junction_4	470.161341988046	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845056	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81838572_81838652_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.22	chr15	-	4043	7	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	0	-4	intron_retention	FALSE	canonical	2	18	junction_4	411.349405412641	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTGTGGTGTTTGCTC	NA	False	NA	-7	True	ATTAAA	-10	NA	81845039	81835312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81839950_81840369_81840453_81840562_81840640_81841993_81842112_81844915
ES.12374.23	chr15	-	3306	6	NNC	ENSMUSG00000022474.16	novel	1291	9	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	545.19244308776	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGTGTGGTGTTTGCT	NA	False	NA	-8	True	ATTAAA	-9	NA	81845061	81835313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81837002_81838572_81839950_81840369_81840658_81841993_81842112_81844915
ES.12374.24	chr15	-	1140	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	476.618103229966	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAAGGTGTGGTGTTTGC	NA	False	NA	-9	True	ATTAAA	-8	NA	81845017	81835314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840569_81840640_81841993_81842079_81844915
ES.12374.25	chr15	-	1190	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_7	366.457113898108	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTGTGGTGTTTG	NA	False	NA	-10	True	ATTAAA	-7	NA	81845061	81835315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842079_81844915
ES.12374.26	chr15	-	637	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTACTGTGTGTCATTT	NA	False	NA	-5	True	NA	NA	NA	81845060	81839744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.27	chr15	-	160	1	Intergenic	novelGene_10357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTACTTCTGAACA	NA	False	NA	NA	False	NA	NA	NA	81846530	81846370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81846400_81846500
ES.12374.3	chr15	-	1234	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.862715638149	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTTGCTCTGTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	81845072	81835306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840453_81840562_81840640_81841993_81842112_81844915
ES.12374.4	chr15	-	6425	4	NIC	ENSMUSG00000022474.16	novel	612	5	NA	NA	2	1	intron_retention	FALSE	canonical	3	1051	junction_1	39.5418203368984	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTGTTTGCTCTGTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	81845057	81835307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81839950_81840369_81840462_81840562_81842112_81844915
ES.12374.5	chr15	-	4762	6	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1051	junction_2	47.5377744535859	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845060	81835308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.6	chr15	-	4121	7	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	30	junction_2	413.12575432777	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845075	81835308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836270_81836925_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.7	chr15	-	5359	6	NIC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	14	0	intron_retention	TRUE	canonical	2	45	junction_2	436.358384816884	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845020	81835308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836209_81836925_81839950_81840369_81840462_81840562_81842112_81844915
ES.12374.8	chr15	-	5099	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	-52	-4435	-16	0	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845086	81835308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12374.9	chr15	-	1333	9	NIC	ENSMUSG00000022474.16	novel	1291	9	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	533.918635538225	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGGTGTTTGCTCTG	NA	False	NA	-5	True	ATTAAA	-12	NA	81845058	81835310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81835814_81836124_81836270_81836925_81837002_81838572_81838652_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ES.12375.1	chr15	+	238	1	FSM	ENSMUSG00000061848.6	ENSMUST00000072779.6	456	1	293	-75	293	75	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGTATGTAATAGGTCA	6567	False	NA	NA	False	AATAAA	-45	NA	81856883	81857121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81856900_81857100
ES.12376.1	chr15	-	2579	3	Antisense	novelGene_ENSMUSG00000061848.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGCTTTGCATTGTT	5698	False	NA	NA	False	NA	NA	NA	81859929	81854970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81857092_81859315_81859496_81859651
ES.12376.2	chr15	-	1010	3	Antisense	novelGene_ENSMUSG00000061848.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGAGTTAAAAATTGT	5698	False	NA	NA	False	NA	NA	NA	81859929	81856539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81857092_81859315_81859496_81859651
ES.12377.1	chr15	+	170	1	Intergenic	novelGene_10358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCCCCCTTGGGTTTT	5327	False	NA	NA	False	NA	NA	NA	81863741	81863911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81863700_81863900
ES.12378.1	chr15	+	1022	1	FSM	ENSMUSG00000061633.4	ENSMUST00000074608.4	1024	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAGTGCATTCTTAAA	6328	False	NA	9	True	AATAAA	-17	NA	81864742	81865764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81864700_81865800
ES.12379.1	chr15	-	171	1	Intergenic	novelGene_10359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	5568	False	NA	NA	False	NA	NA	NA	81866331	81866160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81866200_81866300
ES.1238.1	chr1	+	177	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	127651587	127651764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_127651600_127651800
ES.12380.1	chr15	-	2982	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-47	-1	15	1	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTAAGTTGCTTGAA	NA	False	NA	-8	True	AATAAA	-17	NA	81900411	81876722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ES.12380.10	chr15	-	1548	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	-89	1475	-27	-151	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTCTGAGAATTAGTT	NA	False	NA	-2	True	AATAAA	-31	NA	81900453	81878198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ES.12380.11	chr15	-	1469	5	NNC	ENSMUSG00000022472.17	novel	1855	7	NA	NA	-18	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.5251532535461	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTCTGTCTGAGAATT	NA	False	NA	-6	True	AATAAA	-27	NA	81900382	81878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81900060
ES.12380.12	chr15	-	5053	3	NIC	ENSMUSG00000022472.17	novel	1855	7	NA	NA	10341	217	intron_retention	FALSE	canonical	3	176	junction_1	6.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTCGGACCCTCTTTCC	NA	False	NA	NA	False	TTTAAA	-32	NA	81889871	81878628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81879047_81882310_81883816_81886741
ES.12380.13	chr15	-	2314	1	NIC	ENSMUSG00000022472.17	novel	2854	5	NA	NA	19161	108	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCTGTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	81881051	81878737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81878700_81881100
ES.12380.14	chr15	-	4555	1	NIC	ENSMUSG00000022472.17	novel	2854	5	NA	NA	10739	-5997	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTGTGTTTTGTATAC	NA	False	NA	NA	False	NA	NA	NA	81889473	81884918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81884900_81889500
ES.12380.15	chr15	-	178	1	Intergenic	novelGene_10360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGAGAGAGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	81891013	81890835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81890800_81891000
ES.12380.2	chr15	-	2979	5	NNC	ENSMUSG00000022472.17	novel	2934	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.5251532535461	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900427	81876723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886798_81900060
ES.12380.3	chr15	-	11569	1	NIC	ENSMUSG00000022472.17	novel	2854	5	NA	NA	11920	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81888292	81876723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81876700_81888300
ES.12380.4	chr15	-	3040	6	NIC	ENSMUSG00000022472.17	novel	2934	6	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	70.4198835557117	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900403	81876723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_81879047_81882310_81882501_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ES.12380.5	chr15	-	2961	5	NNC	ENSMUSG00000022472.17	novel	2934	6	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.5251532535461	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900395	81876723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81900060
ES.12380.9	chr15	-	3148	7	FSM	ENSMUSG00000022472.17	ENSMUST00000135988.8	1855	7	17	-1310	17	-14	multi-exon	FALSE	canonical	0	0	junction_2	83.215416573827	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGCCTGCTGCTGT	NA	False	NA	-23	True	AATAAA	-2	NA	81900409	81876737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81879047_81882310_81882434_81883430_81883614_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ES.12381.1	chr15	+	2152	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	8	-46	8	46	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTACTGATAATTGGCT	NA	False	NA	75	True	NA	NA	NA	81900577	81924332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.10	chr15	+	2022	13	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	190.104284246539	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900596	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909769_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.12	chr15	+	2358	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	0	intron_retention	FALSE	canonical	3	579	junction_8	60.0713074892754	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900596	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.13	chr15	+	3493	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	-1	intron_retention	FALSE	canonical	3	583	junction_6	63.4240614455424	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900596	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.14	chr15	+	3589	13	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_3	240.103261928881	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGTGCACTTTTCAG	NA	False	NA	26	True	AATAAA	-12	NA	81900596	81924283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81904388_81904486_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.15	chr15	+	2268	11	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	-1	intron_retention	FALSE	canonical	3	28	junction_1	193.718765224229	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900596	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.16	chr15	+	3702	11	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	0	intron_retention	FALSE	canonical	2	5	junction_5	202.658061769079	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900596	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909769_81909890_81911425_81911613_81913322_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.2	chr15	+	3779	11	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_4	203.545302082853	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900582	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906789_81907012_81907263_81909705_81909890_81911425_81911613_81913322_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.20	chr15	+	1919	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	255.332322750807	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGTGCACTTTTCAG	NA	False	NA	26	True	AATAAA	-12	NA	81900608	81924283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909769_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.21	chr15	+	2551	13	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	39	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	189.380184197467	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATACTGTGCACTTTTC	NA	False	NA	24	True	AATAAA	-10	NA	81900608	81924281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915619_81919551_81919979_81921657_81921772_81923922
ES.12381.23	chr15	+	5462	10	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	39	-2	intron_retention	FALSE	canonical	3	583	junction_6	62.3663014420092	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGTGCACTTTTCAG	NA	False	NA	26	True	AATAAA	-12	NA	81900608	81924283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.25	chr15	+	2790	12	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	-20	0	intron_retention	FALSE	canonical	2	12	junction_8	191.305130335185	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900641	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81914403_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.26	chr15	+	2528	12	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	75	1662	-17	932	5prime_fragment	FALSE	canonical	3	579	junction_9	64.8963572944017	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGGCTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	81900644	81922624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657
ES.12381.27	chr15	+	2015	13	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	189.231101360802	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900654	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913913_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.28	chr15	+	2649	12	ISM	ENSMUSG00000022471.15	ENSMUST00000100399.11	3296	13	948	1	3	0	3prime_fragment	FALSE	canonical	3	579	junction_8	65.7397825389198	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGCACTTTTCAGTA	NA	False	NA	28	True	AATAAA	-14	NA	81900667	81924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.29	chr15	+	1924	11	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	2611	-5	2465	5	3prime_fragment	FALSE	canonical	3	579	junction_7	68.4517348209671	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTTTCAGTATGAATG	NA	False	NA	34	True	AATAAA	-20	NA	81903180	81924291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.3	chr15	+	2087	13	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	285.966914850108	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900589	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81914318_81914403_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.30	chr15	+	1804	10	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	6073	4	159	-3	3prime_fragment	FALSE	canonical	3	579	junction_6	53.9384651681095	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACTGTGCACTTTTCA	NA	False	NA	25	True	AATAAA	-11	NA	81906642	81924282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.31	chr15	+	1668	9	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	6434	2	-173	-1	3prime_fragment	FALSE	canonical	3	579	junction_5	57.2030375067618	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81907003	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.32	chr15	+	5789	6	NIC	ENSMUSG00000022471.15	novel	3296	13	NA	NA	-173	-3	intron_retention	FALSE	canonical	3	583	junction_1	41.969512744372	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACTGTGCACTTTTCA	NA	False	NA	25	True	AATAAA	-11	NA	81907003	81924282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81909890_81911425_81911613_81913322_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.33	chr15	+	1410	8	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	9135	2	115	-1	3prime_fragment	FALSE	canonical	3	579	junction_4	58.2916663627567	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81909704	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.4	chr15	+	2002	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	190.783291885872	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900590	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.6	chr15	+	1994	6	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	26	728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	328.581435872449	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGAGGGTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	81900595	81912685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909852_81911425
ES.12381.7	chr15	+	3429	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	26	-2	intron_retention	FALSE	canonical	2	5	junction_5	198.434701044229	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGTGCACTTTTCAG	NA	False	NA	26	True	AATAAA	-12	NA	81900595	81924283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909769_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
ES.12381.9	chr15	+	2169	14	NNC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	241.839278626096	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGCACTTTTCAGT	NA	False	NA	27	True	AATAAA	-13	NA	81900596	81924284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81914318_81914403_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ES.12382.1	chr15	-	1283	4	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	1	23466	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1489.9906785689	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCAGGTAGCTCTGTG	4907	False	NA	NA	False	TTTAAA	-25	NA	81931798	81901259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81901281_81925539_81926570_81928097_81928219_81931687
ES.12382.10	chr15	-	2074	3	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	276	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1632.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATATGGCAGCTGT	5261	False	NA	-27	True	AATAAA	-20	NA	81931444	81925545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81926570_81928097_81928219_81930515
ES.12382.11	chr15	-	868	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	64	1145	1	64	multi-exon	FALSE	canonical	3	3045	junction_2	110	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCGGGAGCCATTTATT	4970	False	NA	NA	False	AAGAAA	-16	NA	81931735	81925870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81926570_81928097_81928219_81931687
ES.12382.12	chr15	-	669	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	-21	1429	-21	-220	multi-exon	FALSE	canonical	3	3045	junction_2	110	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCATTCTCTTCTACC	4885	False	NA	44	True	NA	NA	NA	81931820	81926154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81926570_81928097_81928219_81931687
ES.12382.13	chr15	-	1045	3	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	136	-259	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_2	1613.5	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATTTTTGTCTTA	5121	False	NA	5	True	NA	NA	NA	81931584	81926193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81926570_81928097_81928219_81931036
ES.12382.14	chr15	-	4061	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	12	1473	-7	-264	intron_retention	FALSE	canonical	3	3265	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATATTTTTATTTTTG	4918	False	NA	0	True	NA	NA	NA	81931787	81926198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81926570_81928097
ES.12382.15	chr15	-	569	3	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	279	-265	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1631	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTATATTTTTATTTTT	5264	False	NA	-1	True	NA	NA	NA	81931441	81926199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81926570_81928097_81928219_81931363
ES.12382.2	chr15	-	6744	1	Antisense	novelGene_ENSMUSG00000022471.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCAGGTAGCTCTGTG	NA	False	NA	NA	False	TTTAAA	-25	NA	81908003	81901259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_81901300_81908000
ES.12382.3	chr15	-	5220	1	Genic_Genomic	ENSMUSG00000063480.9	novel	NA	NA	NA	NA	5881	4106	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCATCCAGGGCTGGAGAG	346	False	NA	NA	False	NA	NA	NA	81925839	81920619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_81920600_81925800
ES.12382.4	chr15	-	2163	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	0	-86	0	86	multi-exon	FALSE	canonical	3	3045	junction_2	110	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGGTTATGGATGTTG	4906	False	NA	NA	False	NA	NA	NA	81931799	81924639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81926570_81928097_81928219_81931687
ES.12382.5	chr15	-	647	1	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	5738	689	5659	264	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCCTCTCTCCAAGA	124	False	NA	NA	False	NA	NA	NA	81926061	81925414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_81925400_81926100
ES.12382.6	chr15	-	1283	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	-3	797	-3	156	multi-exon	FALSE	canonical	3	3045	junction_2	110	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTCAGTTTTATCAGC	4903	False	NA	-4	True	AATAAA	-43	NA	81931802	81925522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_81926570_81928097_81928219_81931687
ES.12382.7	chr15	-	781	4	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	-8	139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1489.9906785689	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGCAGCTGTGCCTGA	4917	False	NA	-21	True	AATAAA	-26	NA	81931788	81925539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81925860_81926330_81926570_81928097_81928219_81931687
ES.12382.8	chr15	-	1158	4	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	-9	138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1489.9906785689	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCAGCTGTGCCTG	4916	False	NA	-22	True	AATAAA	-25	NA	81931789	81925540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81926369_81926462_81926570_81928097_81928219_81931687
ES.12382.9	chr15	-	1242	3	NNC	ENSMUSG00000063480.9	novel	2077	3	NA	NA	10	133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1522.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATATGGCAGCTGT	4935	False	NA	-27	True	AATAAA	-20	NA	81931770	81925545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_81926584_81928097_81928219_81931687
ES.12383.1	chr15	+	1494	1	NIC	ENSMUSG00000068117.11	novel	4130	31	NA	NA	110	-55059	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCCTCCTCCAAACG	5090	False	NA	NA	False	NA	NA	NA	81954307	81955801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_81954300_81955800
ES.12383.2	chr15	+	3880	29	NNC	ENSMUSG00000068117.11	novel	4130	31	NA	NA	112	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1.61308425580517	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTGTGCACTTTCAC	5092	False	NA	NA	False	AATAAA	-14	NA	81954309	82011015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81954506_81957039_81957091_81959318_81959393_81961800_81961907_81963978_81964330_81966097_81966229_81967274_81967390_81969014_81969132_81970331_81970432_81970536_81970672_81973708_81973824_81975509_81975602_81978097_81978210_81980070_81980132_81982201_81982300_81985148_81985318_81985628_81985777_81987340_81987617_81991230_81991397_81993739_81993839_81996644_81996756_81997048_81997213_81999639_81999722_81999883_82000060_82007622_82007705_82008098_82008206_82009050_82009183_82009353_82009467_82010814
ES.12383.3	chr15	+	3780	30	NNC	ENSMUSG00000068117.11	novel	3956	31	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1.57341166159308	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGTGTGCACTTT	5104	False	NA	NA	False	AATAAA	-11	NA	81954321	82011012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81954506_81956082_81956207_81957039_81957091_81959318_81959393_81961800_81961907_81964125_81964330_81966097_81966229_81967274_81967390_81969014_81969132_81970331_81970432_81970536_81970672_81973708_81973824_81975509_81975602_81978159_81978210_81980070_81980132_81982201_81982300_81985148_81985318_81985628_81985777_81987340_81987617_81991230_81991397_81993739_81993839_81996644_81996756_81997048_81997213_81999639_81999722_81999883_82000060_82007622_82007705_82008098_82008206_82009050_82009183_82009353_82009467_82010814
ES.12383.4	chr15	+	3982	31	NNC	ENSMUSG00000068117.11	novel	4130	31	NA	NA	128	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1.59338912036228	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTGTGCACTTTCAC	5108	False	NA	NA	False	AATAAA	-14	NA	81954325	82011015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_81954506_81956082_81956207_81957039_81957091_81959318_81959393_81961800_81961907_81964125_81964330_81966097_81966229_81967274_81967390_81969014_81969127_81970327_81970432_81970536_81970672_81973708_81973824_81975509_81975602_81976819_81976962_81978097_81978210_81980070_81980132_81982201_81982300_81985148_81985318_81985628_81985777_81987340_81987617_81991230_81991397_81993739_81993839_81996644_81996756_81997048_81997213_81999639_81999722_81999883_82000060_82007622_82007705_82008098_82008206_82009050_82009183_82009353_82009467_82010814
ES.12383.5	chr15	+	177	1	Intergenic	novelGene_10361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	81962485	81962662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_81962500_81962700
ES.12384.1	chr15	-	171	1	Intergenic	novelGene_10362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGTATGAAACA	6385	False	NA	NA	False	NA	NA	NA	81962957	81962786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_81962800_81963000
ES.12385.1	chr15	-	211	1	Intergenic	novelGene_10363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAGAATGAGGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	82002536	82002325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82002300_82002500
ES.12386.1	chr15	+	5813	8	NNC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	-42	3930	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	20.3890727036392	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTGTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	82012080	82030334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82012251_82014252_82014372_82015616_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066_82027572_82027784
ES.12386.10	chr15	+	5845	5	NNC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	1426	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.2843860174436	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	230	False	NA	25	True	AATAAA	-36	NA	82015681	82026404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82015747_82015945_82016031_82018781_82018964_82019270_82022186_82023806
ES.12386.2	chr15	+	2068	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	-25	3	-25	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATGTCTTTGGCTTCT	NA	False	NA	22	True	AATAAA	-33	NA	82012097	82026401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ES.12386.3	chr15	+	5756	8	NNC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	-2	3926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.9859632305396	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGTGGTCTTGTGCTG	NA	False	NA	NA	False	AATAAA	-11	NA	82012125	82030330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066_82027572_82027784
ES.12386.4	chr15	+	5973	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	3	-3930	-2	3930	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTGTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	82012125	82030334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ES.12386.5	chr15	+	2215	6	NIC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	4	-17	intron_retention	FALSE	canonical	3	36	junction_2	6.62117814289874	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTCTGACAAGCTCTAA	NA	False	NA	4	True	AATAAA	-15	NA	82012131	82026383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82012251_82014252_82014372_82015624_82016031_82018781_82018964_82019270_82019343_82025066
ES.12386.6	chr15	+	4984	5	FSM	ENSMUSG00000068114.8	ENSMUST00000229456.2	4919	5	-65	0	4	0	multi-exon	FALSE	canonical	3	36	junction_2	6.75925291729789	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATGTCTTTGGCTTCT	NA	False	NA	22	True	AATAAA	-33	NA	82012131	82026401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82012251_82014252_82014372_82015624_82018964_82019270_82019343_82025066
ES.12386.7	chr15	+	1687	4	NIC	ENSMUSG00000068114.8	novel	1854	6	NA	NA	5	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.7627158941622	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCTCTGACAAGCTCT	NA	False	NA	2	True	AATAAA	-13	NA	82012132	82026381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82012251_82018781_82018964_82019270_82019343_82025066
ES.12386.8	chr15	+	1969	7	NIC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	17.2666988416689	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTCTAAACTATGTCT	NA	False	NA	13	True	AATAAA	-24	NA	82012195	82026392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82012251_82014252_82014372_82015616_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ES.12386.9	chr15	+	3125	5	NNC	ENSMUSG00000068114.8	novel	2046	7	NA	NA	117	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.0296654989543	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGACAAGCTCTAAACTAT	NA	False	NA	9	True	AATAAA	-20	NA	82014372	82026388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82015747_82015945_82016031_82018781_82018964_82019180_82019343_82025066
ES.12387.1	chr15	-	700	1	Intergenic	novelGene_10364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAACAAAACGACTGG	7006	False	NA	NA	False	NA	NA	NA	82022589	82021889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82021900_82022600
ES.12388.1	chr15	-	180	1	Intergenic	novelGene_10365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	5558	False	NA	NA	False	NA	NA	NA	82024037	82023857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82023900_82024000
ES.12389.1	chr15	+	4357	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	20	700	-3	4	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTCCTTCCCACTC	2193	False	NA	21	True	AATAAA	-17	NA	82031401	82088880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.11	chr15	+	2839	4	NNC	ENSMUSG00000022463.9	novel	1981	4	NA	NA	1	14	intron_retention	FALSE	canonical	2	6	junction_2	348.632566847486	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2239	False	NA	NA	False	NA	NA	NA	82031447	82058109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82055196_82055302_82055485_82056953
ES.12389.12	chr15	+	4314	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_4	170.308480103199	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2239	False	NA	18	True	AATAAA	-14	NA	82031447	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057107_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.13	chr15	+	4665	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	1	-1388	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGGTAACCATACCTT	2239	False	NA	NA	False	AATAAA	-17	NA	82031447	82086632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
ES.12389.14	chr15	+	4174	20	NNC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	2	3	intron_retention	FALSE	canonical	2	10	junction_19	164.075197272808	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTGTTCCTTCCCACT	2240	False	NA	20	True	AATAAA	-16	NA	82031448	82088879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088172
ES.12389.15	chr15	+	4115	20	NIC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	-2	0	intron_retention	FALSE	canonical	1	4	junction_19	165.260962104085	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTCCTGTTCCTTCCC	2241	False	NA	17	True	AATAAA	-13	NA	82031449	82088876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088227
ES.12389.16	chr15	+	5031	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_8	170.519404420584	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2241	False	NA	23	True	AATAAA	-19	NA	82031449	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063542_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.17	chr15	+	8295	16	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	584	junction_6	61.6997748960417	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2241	False	NA	22	True	AATAAA	-18	NA	82031449	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385
ES.12389.18	chr15	+	4948	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	3	-2	intron_retention	FALSE	canonical	1	4	junction_5	169.726104701911	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2246	False	NA	23	True	AATAAA	-19	NA	82031454	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061410_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.19	chr15	+	5078	20	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_4	217.019970486653	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2246	False	NA	23	True	AATAAA	-19	NA	82031454	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059106_82059183_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.2	chr15	+	3153	1	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	1	-19804	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTCAGCAGGACACTAT	2197	False	NA	NA	False	AATAAA	-5	NA	82031405	82034558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031400_82034600
ES.12389.20	chr15	+	4965	19	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	3	-3	intron_retention	FALSE	canonical	3	4	junction_15	169.324739137406	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2246	False	NA	22	True	AATAAA	-18	NA	82031454	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081854_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.21	chr15	+	927	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	8	3198	3	266	5prime_fragment	FALSE	canonical	3	751	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCCATCAGATCTGAG	2246	False	NA	NA	False	AATAAA	-17	NA	82031454	82054628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938
ES.12389.23	chr15	+	4401	16	NIC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	3	0	intron_retention	FALSE	canonical	1	3	junction_14	177.118968179269	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTCCTGTTCCTTCCC	2246	False	NA	17	True	AATAAA	-13	NA	82031454	82088876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82087385_82087498_82087897
ES.12389.24	chr15	+	4700	18	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	74	703	4	1	intron_retention	FALSE	canonical	3	584	junction_6	58.9830777444481	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2247	False	NA	18	True	AATAAA	-14	NA	82031455	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385
ES.12389.25	chr15	+	5948	18	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-2	intron_retention	FALSE	canonical	3	437	junction_17	81.0352992416477	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2247	False	NA	23	True	AATAAA	-19	NA	82031455	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.26	chr15	+	1536	4	NNC	ENSMUSG00000022463.9	novel	1981	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	331.985274104473	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	2247	False	NA	NA	False	NA	NA	NA	82031455	82058093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031509_82054194_82054356_82055302_82055485_82056953
ES.12389.28	chr15	+	4401	17	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_1	174.743014434769	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2247	False	NA	22	True	AATAAA	-18	NA	82031455	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.29	chr15	+	4642	17	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_1	221.013918891435	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACAAGGCTGTGTGAG	2247	False	NA	21	True	AATAAA	-17	NA	82031455	82089576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053940_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82087385_82087498_82087897
ES.12389.3	chr15	+	5037	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	45	-5	-20	5	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGTCTGTAGTA	2218	False	NA	30	True	AATAAA	-26	NA	82031426	82089585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.30	chr15	+	4739	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_3	173.14295951342	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2247	False	NA	22	True	AATAAA	-18	NA	82031455	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055371_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.31	chr15	+	5769	18	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	1	intron_retention	FALSE	canonical	3	437	junction_17	78.518241109001	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2247	False	NA	18	True	AATAAA	-14	NA	82031455	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.32	chr15	+	4689	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	167.849956880219	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2247	False	NA	22	True	AATAAA	-18	NA	82031455	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031639_82054196_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.33	chr15	+	1983	4	NNC	ENSMUSG00000022463.9	novel	1981	4	NA	NA	4	14	intron_retention	FALSE	canonical	2	5	junction_2	349.103932311791	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2247	False	NA	NA	False	NA	NA	NA	82031455	82058109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055310_82055485_82056953
ES.12389.35	chr15	+	3259	18	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	74	2144	4	-584	5prime_fragment	FALSE	canonical	3	584	junction_6	58.9830777444481	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACACACCAGCTGCTGGA	2247	False	NA	NA	False	NA	NA	NA	82031455	82087436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385
ES.12389.36	chr15	+	4864	20	NNC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	5	-3	intron_retention	FALSE	canonical	2	10	junction_19	164.075197272808	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2248	False	NA	22	True	AATAAA	-18	NA	82031456	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088172
ES.12389.37	chr15	+	4943	20	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	5	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	250.570164229934	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2248	False	NA	22	True	AATAAA	-18	NA	82031456	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82070804_82070887_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087487_82088024
ES.12389.38	chr15	+	4959	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	5	-2	intron_retention	FALSE	canonical	2	11	junction_2	168.136601210643	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2248	False	NA	23	True	AATAAA	-19	NA	82031456	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055343_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.39	chr15	+	4283	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	5	1	intron_retention	FALSE	non_canonical	0	0	junction_9	170.569063887786	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2248	False	NA	18	True	AATAAA	-14	NA	82031456	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063733_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.4	chr15	+	4646	17	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_7	180.038711115138	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	2229	False	NA	25	True	AATAAA	-21	NA	82031437	82089580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.40	chr15	+	3411	13	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	5	-7921	intron_retention	FALSE	canonical	1	3	junction_8	191.224181263772	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCATTAAAGTGAACTT	2248	False	NA	NA	False	NA	NA	NA	82031456	82080099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115
ES.12389.41	chr15	+	4994	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_7	169.918353668991	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2248	False	NA	23	True	AATAAA	-19	NA	82031456	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061783_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.42	chr15	+	2290	2	ISM	ENSMUSG00000022463.9	ENSMUST00000231065.2	2664	3	10	1833	5	525	5prime_fragment	FALSE	canonical	3	751	junction_1	0	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACAGCGTTT	2248	False	NA	NA	False	NA	NA	NA	82031456	82055993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938
ES.12389.43	chr15	+	2377	12	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	75	13119	5	-11559	5prime_fragment	FALSE	canonical	3	584	junction_6	55.7107346066557	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCCCTGCGCTGGCTA	2248	False	NA	NA	False	NA	NA	NA	82031456	82076461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406
ES.12389.44	chr15	+	4523	20	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_19	166.052773375534	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2249	False	NA	22	True	AATAAA	-18	NA	82031457	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088718_82089192
ES.12389.46	chr15	+	4388	2	ISM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	7	2	7	-2	intron_retention	FALSE	canonical	3	751	junction_1	0	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	2250	False	NA	NA	False	NA	NA	NA	82031458	82058093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938
ES.12389.47	chr15	+	4261	19	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	7	1	intron_retention	FALSE	canonical	3	4	junction_15	169.324739137406	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2250	False	NA	18	True	AATAAA	-14	NA	82031458	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081854_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.48	chr15	+	3407	13	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	9	-7921	intron_retention	FALSE	canonical	0	0	junction_2	187.852039884822	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCATTAAAGTGAACTT	2252	False	NA	NA	False	NA	NA	NA	82031460	82080099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115
ES.12389.49	chr15	+	4805	20	NIC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	9	-3	intron_retention	FALSE	canonical	1	4	junction_19	165.260962104085	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2252	False	NA	22	True	AATAAA	-18	NA	82031460	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088227
ES.12389.5	chr15	+	2008	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	-13	-14	-8	14	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2230	False	NA	NA	False	NA	NA	NA	82031438	82058109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
ES.12389.51	chr15	+	3483	3	NNC	ENSMUSG00000022463.9	novel	2664	3	NA	NA	15	14	intron_retention	FALSE	canonical	1	1	junction_2	375	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAAGTGTGACTGTGC	2258	False	NA	NA	False	NA	NA	NA	82031466	82058109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82056041_82056953
ES.12389.56	chr15	+	1773	3	NIC	ENSMUSG00000022463.9	novel	1981	4	NA	NA	22	-4	intron_retention	FALSE	canonical	0	0	junction_2	375.5	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	2265	False	NA	NA	False	NA	NA	NA	82031473	82058091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82031692_82053938_82054356_82056953
ES.12389.57	chr15	+	4920	20	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	31	-2	intron_retention	FALSE	non_canonical	0	0	junction_19	166.052773375534	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2274	False	NA	23	True	AATAAA	-19	NA	82031482	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088708_82088761
ES.12389.59	chr15	+	4626	19	NIC	ENSMUSG00000022463.9	novel	740	6	NA	NA	364	0	intron_retention	FALSE	canonical	3	9	junction_1	166.011787473802	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTCCTGTTCCTTCCC	2607	False	NA	17	True	AATAAA	-13	NA	82031815	82088876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82032379_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.6	chr15	+	5007	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	5	junction_2	169.352115100134	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2233	False	NA	23	True	AATAAA	-19	NA	82031441	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055310_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.60	chr15	+	2276	4	NIC	ENSMUSG00000022463.9	novel	748	3	NA	NA	-372	-2	intron_retention	FALSE	canonical	3	9	junction_1	327.762447852438	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	2633	False	NA	NA	False	NA	NA	NA	82031841	82058093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82032379_82053938_82054356_82055302_82055485_82056953
ES.12389.61	chr15	+	5294	19	NIC	ENSMUSG00000022463.9	novel	740	6	NA	NA	-370	-8	intron_retention	FALSE	canonical	3	9	junction_1	166.011787473802	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTAACACAAGGCTGTG	2635	False	NA	17	True	AATAAA	-13	NA	82031843	82089572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82032379_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.62	chr15	+	4446	17	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	21821	1	intron_retention	FALSE	non_canonical	0	0	junction_11	177.916412958445	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTGTGTGAGTCTGT	NA	False	NA	26	True	AATAAA	-22	NA	82054046	82089581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076513_82079148_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.64	chr15	+	3025	14	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-22134	1	intron_retention	FALSE	canonical	1	3	junction_12	179.889874267301	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	NA	False	NA	18	True	AATAAA	-14	NA	82057038	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82087385_82087498_82087897
ES.12389.65	chr15	+	3098	14	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	29950	-1	-17818	1	intron_retention	FALSE	canonical	3	437	junction_13	83.3582132484636	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	2203	False	NA	18	True	AATAAA	-14	NA	82061354	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.66	chr15	+	3698	14	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-17726	-2	intron_retention	FALSE	canonical	0	0	junction_13	187.49529382654	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	2295	False	NA	23	True	AATAAA	-19	NA	82061446	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087906
ES.12389.67	chr15	+	3503	12	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	31533	2	-16258	-2	3prime_fragment	FALSE	canonical	3	437	junction_11	87.4300665041816	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAAGGCTGTGTGAGTC	3763	False	NA	23	True	AATAAA	-19	NA	82062914	82089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.68	chr15	+	3958	10	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-15633	1	intron_retention	FALSE	canonical	3	437	junction_9	96.3790100605257	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	4388	False	NA	18	True	AATAAA	-14	NA	82063539	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.69	chr15	+	2852	12	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-15546	0	intron_retention	FALSE	non_canonical	0	0	junction_11	208.724421900075	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	4475	False	NA	25	True	AATAAA	-21	NA	82063626	82089580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82089101_82089497
ES.12389.7	chr15	+	4046	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-1	-2009	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCTCAAGAAGACAGA	2237	False	NA	NA	False	NA	NA	NA	82031445	82086011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
ES.12389.70	chr15	+	5771	1	NIC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	-4844	-7921	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	537	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCATTAAAGTGAACTT	4252	False	NA	NA	False	NA	NA	NA	82074328	82080099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82074300_82080100
ES.12389.71	chr15	+	2305	3	ISM	ENSMUSG00000022463.9	ENSMUST00000230955.2	740	6	3636	-857	3636	1	3prime_fragment	FALSE	canonical	3	437	junction_2	173	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCTGTTCCTTCCCA	388	False	NA	18	True	AATAAA	-14	NA	82082808	82088877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82084022_82087385_82087498_82087897
ES.12389.72	chr15	+	1179	1	Intergenic	novelGene_10369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	566	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTTCCT	2400	False	NA	NA	False	NA	NA	NA	82084820	82085999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82084800_82086000
ES.12389.8	chr15	+	5491	19	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_2	221.936044897379	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAAGGCTGTGTGAGT	2238	False	NA	22	True	AATAAA	-18	NA	82031446	82089577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82031692_82053938_82054356_82055192_82055260_82055343_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ES.12389.9	chr15	+	1351	3	ISM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	-4	2103	1	524	5prime_fragment	FALSE	canonical	3	662	junction_2	44.5	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACAAAAAACAGCGTT	2239	False	NA	NA	False	NA	NA	NA	82031447	82055992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82031692_82053938_82054356_82055302
ES.1239.1	chr1	+	2090	5	NNC	ENSMUSG00000026348.8	novel	2717	10	NA	NA	712	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACAACACTTGGAAG	NA	False	NA	NA	False	AATAAA	-5	NA	127685205	127695704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127685243_127685740_127685837_127687395_127687569_127693616_127693716_127694019
ES.12390.1	chr15	-	3906	1	Intergenic	novelGene_10366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAACTTAAAGAACGTAA	9690	False	NA	NA	False	AAAAAG	-4	NA	82037906	82034000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82034000_82037900
ES.12390.2	chr15	-	1692	1	Intergenic	novelGene_10367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAATCTATCTAGAGCACA	9693	False	NA	NA	False	NA	NA	NA	82037903	82036211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82036200_82037900
ES.12391.1	chr15	-	2204	1	Intergenic	novelGene_10368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTAGGTCCTGCCCGC	3150	False	NA	NA	False	NA	NA	NA	82044446	82042242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82042200_82044400
ES.12392.1	chr15	-	3064	17	Antisense	novelGene_ENSMUSG00000065465.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCATTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	82087434	82053897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_82054347_82055291_82055484_82056952_82057101_82059297_82059518_82061354_82061472_82061606_82061786_82062914_82063109_82063564_82063749_82066181_82066457_82069462_82069635_82076406_82076573_82078242_82078363_82079114_82079225_82080359_82080494_82081818_82081988_82083835_82084020_82087383
ES.12392.2	chr15	-	2474	16	Antisense	novelGene_ENSMUSG00000065465.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGTGTGCCATTGGC	NA	False	NA	NA	False	NA	NA	NA	82087431	82055429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_82055484_82056952_82057101_82059297_82059518_82061354_82061472_82061606_82061786_82062914_82063109_82063564_82063749_82066181_82066457_82069462_82069635_82076406_82076573_82078242_82078363_82079114_82079225_82080359_82080494_82081818_82081988_82083835_82084020_82087383
ES.12392.3	chr15	-	1144	6	Antisense	novelGene_ENSMUSG00000065465.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAACAAATTAA	NA	False	NA	NA	False	NA	NA	NA	82087434	82077866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_82078363_82079114_82079225_82080359_82080494_82081818_82081988_82083835_82084020_82087383
ES.12393.1	chr15	+	2104	1	Antisense	novelGene_ENSMUSG00000096883.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAACAACAA	NA	False	NA	NA	False	NA	NA	NA	82095931	82098035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_82095900_82098000
ES.12394.1	chr15	-	1901	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-51	245	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	36.3807030657127	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGATCATCAGTCATTGA	NA	False	NA	-1	True	AATAAA	-29	NA	82097067	82091149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82091792_82091951_82092099_82092663_82092798_82096089
ES.12394.2	chr15	-	1876	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	-70	782	-70	244	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCGATCATCAGTCATTG	NA	False	NA	-2	True	AATAAA	-28	NA	82097086	82091150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
ES.12394.3	chr15	-	2594	2	NIC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	-27	237	intron_retention	FALSE	canonical	3	79	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGGGATCGATCATCA	NA	False	NA	-9	True	AATAAA	-21	NA	82097043	82091157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82092798_82096089
ES.12395.1	chr15	+	3461	3	Antisense	novelGene_ENSMUSG00000068105.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	82100488	82106343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_82100541_82101742_82102277_82103468
ES.12396.1	chr15	-	336	3	Intergenic	novelGene_10370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCCATCTTGTCCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	82102309	82099506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82099674_82099812_82099935_82102262
ES.12397.1	chr15	-	236	1	Intergenic	novelGene_10371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCCAGGACTCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	82102784	82102548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82102500_82102800
ES.12398.1	chr15	-	1566	1	Genic_Genomic	ENSMUSG00000068105.12	novel	NA	NA	NA	NA	2550	1556	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTCAAAAAGTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	82105953	82104387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_82104400_82106000
ES.12398.10	chr15	-	1120	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	-28	-499	-28	118	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTGCCTGTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	82128639	82118161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
ES.12398.11	chr15	-	929	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	-10	283	-10	17	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTGACTCAGTACAAT	NA	False	NA	0	True	AAAAAG	-31	NA	82128959	82118262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.12	chr15	-	809	5	FSM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	-9	-11	-9	11	multi-exon	FALSE	canonical	3	56	junction_1	529.66121247454	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCAGAAACTGACTCAG	NA	False	NA	-6	True	AAAAAG	-25	NA	82128937	82118268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.13	chr15	-	5678	5	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	10	3	intron_retention	FALSE	canonical	3	1067	junction_1	121.289684227473	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	False	NA	-14	True	AAAAAG	-17	NA	82128939	82118276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.15	chr15	-	889	7	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	19	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	618.258755610375	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128592	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118711_82121485_82121539_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
ES.12398.17	chr15	-	2188	5	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-20	-27	intron_retention	FALSE	canonical	3	1067	junction_2	108.155848200641	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128894	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82118711_82123493_82123586_82124079_82125621_82128333_82128414_82128823
ES.12398.18	chr15	-	849	6	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	2	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	606.644080165627	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128609	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118707_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
ES.12398.19	chr15	-	727	5	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-20	-27	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	489.075914352772	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128894	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82128333_82128414_82128823
ES.12398.2	chr15	-	4554	9	Fusion	ENSMUSG00000068105.12_ENSMUSG00000068101.12	novel	1202	6	NA	NA	-21	-3	multi-exon	FALSE	canonical	0	0	junction_1	593.939601306396	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACTCTGTGCCTGGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	82128895	82105948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_82107445_82107919_82108124_82108368_82110669_82118573_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.20	chr15	-	5512	5	FSM	ENSMUSG00000068101.12	ENSMUST00000229505.2	381	5	-21	-5110	-21	-27	multi-exon	FALSE	canonical	2	7	junction_1	550.603021695305	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128895	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82123494_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.22	chr15	-	1059	6	NNC	ENSMUSG00000068101.12	novel	593	5	NA	NA	0	-27	intron_retention	FALSE	canonical	1	3	junction_1	614.218658134056	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128611	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118711_82121195_82121308_82123493_82123586_82124079_82124160_82125527_82125621_82128333
ES.12398.23	chr15	-	864	6	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	9	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	638.248102229846	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128940	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118711_82123493_82123586_82124077_82124160_82125527_82125621_82128333_82128406_82128819
ES.12398.24	chr15	-	813	6	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-20	-27	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	484.652617861495	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128894	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118711_82123493_82123586_82124079_82124153_82125527_82125621_82128333_82128414_82128823
ES.12398.25	chr15	-	898	6	NNC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-20	-27	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	505.225731727908	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	-44	True	NA	NA	NA	82128894	82118306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128492_82128823
ES.12398.3	chr15	-	1560	1	Genic_Genomic	ENSMUSG00000116009.2	novel	NA	NA	NA	NA	3318	679	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCCTTGGACTCCTG	NA	False	NA	NA	False	AATAAA	-28	NA	82114414	82112854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_82112900_82114400
ES.12398.4	chr15	-	3199	6	Fusion	ENSMUSG00000068101.12_ENSMUSG00000116009.2	novel	1202	6	NA	NA	-3	-2169	multi-exon	FALSE	non_canonical	0	0	junction_1	610.078814580543	291	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTCCTCTAGCCT	NA	False	NA	NA	False	CATAAA	-18	NA	82128952	82115702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_82117727_82117917_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.5	chr15	-	1224	2	Fusion	ENSMUSG00000068101.12_ENSMUSG00000116009.2	novel	653	2	NA	NA	-795	792	multi-exon	FALSE	non_canonical	0	0	junction_1	0	291	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGCCTGAAGTACCTTT	NA	False	NA	NA	False	NA	NA	NA	82118527	82117187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_82117766_82117881
ES.12398.6	chr15	-	1194	6	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	488.753271088798	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82128623	82117979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
ES.12398.7	chr15	-	1099	5	FSM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	-10	-300	-10	0	multi-exon	FALSE	canonical	3	56	junction_1	529.66121247454	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82128938	82117979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12398.8	chr15	-	1199	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	3	0	3	0	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82128946	82117979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ES.12399.1	chr15	-	174	1	Intergenic	novelGene_10372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	82129367	82129193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82129200_82129400
ES.124.1	chr1	-	175	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAGTCAAACAA	NA	False	NA	NA	False	NA	NA	NA	13606964	13606789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13606800_13607000
ES.1240.1	chr1	+	5137	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	-243	-383	-243	383	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701657	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.10	chr1	+	4449	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	-2	2291	-2	-162	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701898	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.100	chr1	+	5177	10	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	53	-163	intron_retention	FALSE	canonical	3	45	junction_6	210.51987384556	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTGCTAATGATGGACA	NA	False	NA	12	True	AATAAA	-21	NA	127701953	127733506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127731031_127731128
ES.1240.101	chr1	+	7078	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	54	-3	intron_retention	FALSE	canonical	3	45	junction_6	206.314634466539	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAAGGCTGAAACATG	NA	False	NA	5	True	AATAAA	-19	NA	127701954	127735795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.103	chr1	+	4231	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	54	-165	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	172.705674486972	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701954	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.104	chr1	+	7357	7	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	55	-1223	intron_retention	FALSE	canonical	3	424	junction_6	40.9691618442729	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAAATAAAAAAGAAA	NA	False	NA	-15	True	ATTAAA	-30	NA	127701955	127732446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127727291_127729342_127729414_127729898
ES.1240.105	chr1	+	4695	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	55	-165	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	206.172646100301	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701955	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.107	chr1	+	10629	8	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	56	8	intron_retention	FALSE	non_canonical	0	0	junction_5	172.934103292649	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTTTAAGTTTA	NA	False	NA	16	True	AATAAA	-30	NA	127701956	127735806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723818_127723904_127727291_127729342_127729414_127729898
ES.1240.108	chr1	+	4915	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	56	373	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	182.04296196228	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAAAAGAGTGACTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	127701956	127734042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.109	chr1	+	4864	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	56	1	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701956	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.11	chr1	+	6637	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	3	-2129	3	0	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701903	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.110	chr1	+	4310	5	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	62	4	intron_retention	FALSE	canonical	0	0	junction_4	264.765344220123	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTGTGAACTATTCAAA	NA	False	NA	31	True	ATTAAA	-25	NA	127701962	127733673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127727126_127727291_127729898
ES.1240.111	chr1	+	6605	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	62	0	intron_retention	FALSE	canonical	0	0	junction_7	172.59153146865	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701962	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729898
ES.1240.112	chr1	+	4483	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	64	1	intron_retention	FALSE	canonical	1	1	junction_4	170.758691176306	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701964	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.114	chr1	+	7480	9	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	182	0	intron_retention	FALSE	non_canonical	0	0	junction_4	172.866594155725	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127702082	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702920_127719341_127719471_127721094_127721156_127722991_127723818_127723904_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.115	chr1	+	8048	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	193	0	intron_retention	FALSE	canonical	3	419	junction_5	43.9006299057593	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127702093	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342_127729414_127729898
ES.1240.116	chr1	+	1560	4	ISM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	223	-28	223	28	3prime_fragment	FALSE	canonical	3	475	junction_3	20.9814733091416	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGGAAAGCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	127702123	127723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127702920_127719341_127719471_127721094_127721156_127722991
ES.1240.117	chr1	+	4886	9	NNC	ENSMUSG00000026349.15	novel	665	4	NA	NA	444	-1	intron_retention	FALSE	canonical	1	26	junction_1	187.214949990646	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGATTGTGTGAACTAT	NA	False	NA	26	True	ATTAAA	-20	NA	127702344	127733668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702577_127702879_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.118	chr1	+	4542	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	832	-162	combination_of_known_junctions	FALSE	canonical	3	50	junction_5	160.543169817342	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127702732	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.119	chr1	+	2448	3	ISM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	15757	-28	-6650	28	3prime_fragment	FALSE	canonical	3	475	junction_2	10	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGGAAAGCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	127717657	127723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127719471_127721094_127721156_127722991
ES.1240.12	chr1	+	6721	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	182.04296196228	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGCTGAAACATGTTTT	NA	False	NA	9	True	AATAAA	-23	NA	127701907	127735799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.120	chr1	+	5331	8	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	-5594	1	intron_retention	FALSE	canonical	3	45	junction_4	203.007992202177	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127718713	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.121	chr1	+	4527	9	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	-4889	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_4	194.028308179503	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127719418	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.122	chr1	+	6733	4	NNC	ENSMUSG00000026349.15	novel	7640	5	NA	NA	-1198	-1203	intron_retention	FALSE	non_canonical	0	0	junction_1	203.503207727926	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCTGACTGTGCATTG	NA	False	NA	5	True	AATAAA	-12	NA	127723109	127732466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127723818_127723904_127727291_127729342_127729414_127729898
ES.1240.123	chr1	+	6990	4	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	-269	-6	intron_retention	FALSE	canonical	3	163	junction_3	126.720164141308	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTACAGGATTGTGTGA	NA	False	NA	21	True	ATTAAA	-15	NA	127724038	127733663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.124	chr1	+	7616	1	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	544	-1202	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTGACTGTGCATTGT	NA	False	NA	6	True	AATAAA	-13	NA	127724851	127732467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127724900_127732500
ES.1240.125	chr1	+	5578	3	NIC	ENSMUSG00000026349.15	novel	7640	5	NA	NA	1077	-170	intron_retention	FALSE	canonical	3	424	junction_2	7.5	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCATTGGTGCTAATG	NA	False	NA	5	True	AATAAA	-14	NA	127725384	127733499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127727291_127729342_127729414_127729898
ES.1240.126	chr1	+	8120	1	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	1243	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	657	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127725550	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127725600_127733700
ES.1240.127	chr1	+	3785	4	ISM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	24159	1190	1752	-1190	3prime_fragment	FALSE	canonical	3	163	junction_3	126.720164141308	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTACCTGTATTTAT	NA	False	NA	18	True	AATAAA	-25	NA	127726059	127732479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.128	chr1	+	2895	3	ISM	ENSMUSG00000026349.15	ENSMUST00000153359.2	7640	5	2340	3719	2340	-1590	3prime_fragment	FALSE	canonical	3	424	junction_2	7.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTGCATTTAAATGT	NA	False	NA	NA	False	AATAAA	-17	NA	127726647	127732079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127727291_127729342_127729414_127729898
ES.1240.129	chr1	+	3843	2	ISM	ENSMUSG00000026349.15	ENSMUST00000153359.2	7640	5	5034	2129	5034	0	3prime_fragment	FALSE	canonical	3	424	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127729341	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127729414_127729898
ES.1240.13	chr1	+	5377	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	9	373	intron_retention	FALSE	canonical	3	20	junction_6	210.372215693524	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAAAAGAGTGACTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	127701909	127734042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.130	chr1	+	3932	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	-6	317	-6	-317	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCTGTGTTATTTTT	3023	False	NA	51	True	AATAGA	-6	NA	127796503	127871288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.131	chr1	+	4261	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	-3	-15	-3	15	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCTCCCCGAGAGCTC	3026	False	NA	33	True	AATAAA	-30	NA	127796506	127871620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.132	chr1	+	4658	23	NIC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-6	2	intron_retention	FALSE	canonical	3	104	junction_1	18.0744557432091	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGACTTGTGGCTTTTC	3039	False	NA	20	True	AATAAA	-17	NA	127796519	127871607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.133	chr1	+	4324	25	NNC	ENSMUSG00000036104.13	novel	2967	25	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.6379203489123	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3040	False	NA	16	True	AATAAA	-13	NA	127796520	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127800125_127800220_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.134	chr1	+	4137	23	NIC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	32.751380010039	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3040	False	NA	16	True	AATAAA	-13	NA	127796520	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.135	chr1	+	4786	23	ISM	ENSMUSG00000036104.13	ENSMUST00000212506.2	2967	25	-24	1409	-1	-1409	5prime_fragment	FALSE	canonical	3	104	junction_1	18.0360635055674	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTTTGGGTATGTACTT	3044	False	NA	NA	False	AATAAA	-16	NA	127796524	127868938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782
ES.1240.136	chr1	+	4264	25	NNC	ENSMUSG00000036104.13	novel	2967	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	40.2043391798558	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3046	False	NA	16	True	AATAAA	-13	NA	127796526	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127857108_127857149_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.137	chr1	+	4310	24	NNC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	39.8154532984501	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3050	False	NA	16	True	AATAAA	-13	NA	127796530	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865622_127865810_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.139	chr1	+	5495	23	NIC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	104	junction_1	17.24525326954	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3053	False	NA	16	True	AATAAA	-13	NA	127796533	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.14	chr1	+	4925	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	208.214528791821	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGATTGTGTGAACTAT	NA	False	NA	26	True	ATTAAA	-20	NA	127701921	127733668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127714985_127715112_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.140	chr1	+	4203	24	NNC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	30.7470932432832	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3054	False	NA	16	True	AATAAA	-13	NA	127796534	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865810_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.141	chr1	+	2519	6	NNC	ENSMUSG00000036104.13	novel	854	7	NA	NA	-4	-5518	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	60.3854287059387	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	3054	False	NA	NA	False	NA	NA	NA	127796534	127826252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127819723_127824998
ES.1240.143	chr1	+	4276	23	NIC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-2	-363	intron_retention	FALSE	canonical	3	104	junction_1	18.0744557432091	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAAATTCCGCCTGTG	3056	False	NA	5	True	AGTAAA	-15	NA	127796536	127871242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.145	chr1	+	4253	25	NNC	ENSMUSG00000036104.13	novel	2967	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.1680850806992	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3059	False	NA	16	True	AATAAA	-13	NA	127796539	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818838_127819049_127819088_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.147	chr1	+	4283	23	NIC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	14	-2	intron_retention	FALSE	canonical	3	106	junction_9	17.1003963029811	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	3082	False	NA	16	True	AATAAA	-13	NA	127796562	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.148	chr1	+	3831	23	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	150	357	111	-357	3prime_fragment	FALSE	canonical	3	106	junction_9	17.1003963029811	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCGCCTGTGTGATTT	3179	False	NA	11	True	AGTAAA	-21	NA	127796659	127871248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.149	chr1	+	175	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAATAAGCCC	1193	False	NA	NA	False	NA	NA	NA	127798717	127798892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_127798700_127798900
ES.1240.15	chr1	+	4549	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	21	-59	21	59	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAAAATTCATGACTC	NA	False	NA	86	True	NA	NA	NA	127701921	127733728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.150	chr1	+	178	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATCCTTTTGCTAATT	NA	False	NA	NA	False	NA	NA	NA	127842049	127842227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_127842000_127842200
ES.1240.151	chr1	+	177	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTGGGCATTACA	NA	False	NA	NA	False	NA	NA	NA	127848907	127849084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_127848900_127849100
ES.1240.152	chr1	+	1927	7	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	65641	357	-3791	-357	3prime_fragment	FALSE	canonical	3	125	junction_3	5.8142545141708	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCGCCTGTGTGATTT	NA	False	NA	11	True	AGTAAA	-21	NA	127862150	127871248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.153	chr1	+	1859	7	NNC	ENSMUSG00000036104.13	novel	4243	24	NA	NA	-3742	-363	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	47.744691386117	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAAATTCCGCCTGTG	NA	False	NA	5	True	AGTAAA	-15	NA	127862199	127871242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127862292_127865074_127865303_127865725_127865810_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.154	chr1	+	1322	6	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	68647	739	-785	218	3prime_fragment	FALSE	canonical	3	125	junction_2	5.31413210223457	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCAGATTAGAGCTCTC	NA	False	NA	NA	False	GATAAA	-17	NA	127865156	127870866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.1240.155	chr1	+	5536	4	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	68818	2	-614	-2	intron_retention	FALSE	canonical	3	125	junction_1	5.18544972870135	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGGACTTGTGGCT	NA	False	NA	16	True	AATAAA	-13	NA	127865327	127871603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127865823_127865934_127866039_127866311_127866428_127866782
ES.1240.16	chr1	+	2883	4	FSM	ENSMUSG00000026349.15	ENSMUST00000125760.8	665	4	21	-2239	21	28	multi-exon	FALSE	canonical	3	495	junction_3	16.8193010820572	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGGAAAGCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	127701921	127723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094
ES.1240.17	chr1	+	4969	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	23	1746	23	383	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701923	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.18	chr1	+	5061	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	25	383	intron_retention	FALSE	canonical	3	20	junction_6	184.792843643168	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701925	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.19	chr1	+	4796	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701926	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.2	chr1	+	4777	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	-162	2123	-162	6	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAACTATTCAAACT	NA	False	NA	33	True	ATTAAA	-27	NA	127701738	127733675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.20	chr1	+	3290	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	26	1195	26	-1195	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGCATTGTACCTGTA	NA	False	NA	13	True	AATAAA	-20	NA	127701926	127732474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.21	chr1	+	4502	3	FSM	ENSMUSG00000026349.15	ENSMUST00000126850.8	4500	3	26	-28	26	28	multi-exon	FALSE	canonical	3	526	junction_2	4	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGGAAAGCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	127701926	127723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341
ES.1240.22	chr1	+	6246	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	27	-1223	intron_retention	FALSE	canonical	3	45	junction_5	157.754265119094	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAAATAAAAAAGAAA	NA	False	NA	-15	True	ATTAAA	-30	NA	127701927	127732446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127725457_127725577_127725624_127727126_127727291_127729342
ES.1240.23	chr1	+	5275	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	27	383	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701927	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.24	chr1	+	4773	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	27	-5	intron_retention	FALSE	canonical	2	8	junction_5	194.345879780494	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACAGGATTGTGTGAA	NA	False	NA	22	True	ATTAAA	-16	NA	127701927	127733664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.25	chr1	+	1041	5	FSM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	27	-28	27	28	multi-exon	FALSE	canonical	3	475	junction_4	23.7539470404394	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGGAAAGCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	127701927	127723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991
ES.1240.26	chr1	+	3870	8	ISM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	27	1197	27	-1197	intron_retention	FALSE	canonical	3	399	junction_6	48.5264497622751	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGCATTGTACCTG	NA	False	NA	11	True	AATAAA	-18	NA	127701927	127732472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342
ES.1240.28	chr1	+	4358	8	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	184.361446233053	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGATTGTGTGAACTAT	NA	False	NA	26	True	ATTAAA	-20	NA	127701928	127733668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.29	chr1	+	7869	6	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	28	-1223	intron_retention	FALSE	canonical	3	439	junction_5	34.6721790489147	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAAATAAAAAAGAAA	NA	False	NA	-15	True	ATTAAA	-30	NA	127701928	127732446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127727291_127729342
ES.1240.3	chr1	+	4637	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	186.410541547414	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701869	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.30	chr1	+	4792	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	28	372	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	178.300965715276	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTATAAAAGAGTGACTC	NA	False	NA	NA	False	ATTAAA	-19	NA	127701928	127734041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.31	chr1	+	4409	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	28	-168	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	186.410541547414	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTGGTGCTAATGAT	NA	False	NA	7	True	AATAAA	-16	NA	127701928	127733501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.32	chr1	+	4956	12	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	28	-164	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	219.160418999869	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTGCTAATGATGGAC	NA	False	NA	11	True	AATAAA	-20	NA	127701928	127733505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127724585_127724724_127725267_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.33	chr1	+	6812	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	29	-170	intron_retention	FALSE	canonical	3	45	junction_5	147.58847981804	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCATTGGTGCTAATG	NA	False	NA	5	True	AATAAA	-14	NA	127701929	127733499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.34	chr1	+	3495	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	29	-165	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	200.87869473889	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701929	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127731128
ES.1240.35	chr1	+	4626	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	31	-164	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTGCTAATGATGGAC	NA	False	NA	11	True	AATAAA	-20	NA	127701931	127733505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.36	chr1	+	5034	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	32	370	intron_retention	FALSE	canonical	3	45	junction_6	179.561193530847	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCTATAAAAGAGTGAC	NA	False	NA	NA	False	ATTAAA	-17	NA	127701932	127734039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.37	chr1	+	4816	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	32	-165	intron_retention	FALSE	canonical	3	20	junction_6	210.372215693524	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701932	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.38	chr1	+	4513	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	32	-162	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	194.443847935593	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701932	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.39	chr1	+	4783	12	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	33	-165	intron_retention	FALSE	canonical	0	0	junction_2	229.18291803133	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701933	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127711400_127711439_127719341_127719471_127721094_127721156_127722991_127723055_127724585_127724724_127725267_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.4	chr1	+	4377	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	-28	162	-28	-162	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701872	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.40	chr1	+	6799	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	33	0	intron_retention	FALSE	canonical	3	20	junction_6	184.792843643168	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701933	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.41	chr1	+	3686	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	33	-1200	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGTGCATTGTAC	NA	False	NA	8	True	AATAAA	-15	NA	127701933	127732469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.42	chr1	+	7172	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	33	66	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	209.334397555681	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCGTGATTTAATTTTT	NA	False	NA	74	True	NA	NA	NA	127701933	127735864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.43	chr1	+	4813	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	33	-171	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	212.677314258009	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTCATTGGTGCTAAT	NA	False	NA	4	True	AATAAA	-13	NA	127701933	127733498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.44	chr1	+	7285	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	33	-1196	intron_retention	FALSE	canonical	3	45	junction_5	157.6086602821	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGCATTGTACCTGT	NA	False	NA	12	True	AATAAA	-19	NA	127701933	127732473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127725457_127725577_127727291_127729342_127729414_127729898
ES.1240.45	chr1	+	4885	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	34	373	intron_retention	FALSE	canonical	1	1	junction_4	170.758691176306	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTATAAAAGAGTGACTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	127701934	127734042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.46	chr1	+	4502	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	34	-164	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	190.323829301535	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTGCTAATGATGGAC	NA	False	NA	11	True	AATAAA	-20	NA	127701934	127733505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.47	chr1	+	5976	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	38	0	intron_retention	FALSE	canonical	3	163	junction_8	110.48522242816	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701938	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.48	chr1	+	7010	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	38	0	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701938	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.49	chr1	+	6967	9	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	39	0	intron_retention	FALSE	canonical	2	7	junction_5	179.878735194019	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701939	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127724585_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.5	chr1	+	3221	8	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	-28	-1194	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	184.361446233053	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCATTGTACCTGTAT	NA	False	NA	14	True	AATAAA	-21	NA	127701872	127732475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.50	chr1	+	4750	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	39	-9	intron_retention	FALSE	canonical	2	8	junction_5	189.456532686993	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTTTACAGGATTGTG	NA	False	NA	18	True	ATTAAA	-12	NA	127701939	127733660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.51	chr1	+	5779	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	200.87869473889	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701939	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127731128
ES.1240.52	chr1	+	6029	10	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	39	-1189	intron_retention	TRUE	non_canonical	0	0	junction_5	200.591594176628	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTACCTGTATTTATA	NA	False	NA	19	True	AATAAA	-26	NA	127701939	127732480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723818_127723904_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.53	chr1	+	4849	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	40	-1223	intron_retention	FALSE	canonical	3	419	junction_5	43.9006299057593	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAAATAAAAAAGAAA	NA	False	NA	-15	True	ATTAAA	-30	NA	127701940	127732446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342_127729414_127729898
ES.1240.54	chr1	+	4040	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	40	2658	40	-529	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACAGTTTTACCGTGGTA	NA	False	NA	NA	False	CATAAA	-19	NA	127701940	127733140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.56	chr1	+	4498	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	40	-165	intron_retention	FALSE	canonical	3	20	junction_6	184.792843643168	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701940	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.57	chr1	+	3736	10	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	228.276635296349	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701940	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127731128
ES.1240.58	chr1	+	4395	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	40	-163	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	182.04296196228	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTGCTAATGATGGACA	NA	False	NA	12	True	AATAAA	-21	NA	127701940	127733506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.59	chr1	+	4645	10	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	40	-162	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	213.584747686824	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701940	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.6	chr1	+	6771	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	-28	-5	-28	5	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAAACATGTTTTAAGT	NA	False	NA	13	True	AATAAA	-27	NA	127701872	127735803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.60	chr1	+	3746	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	40	2952	40	-823	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATTGTAATTTTATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	127701940	127732846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.61	chr1	+	3205	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	40	-1195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	162.948580846843	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGCATTGTACCTGTA	NA	False	NA	13	True	AATAAA	-20	NA	127701940	127732474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127730194_127730264_127731031_127731128
ES.1240.62	chr1	+	4716	9	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	41	-162	intron_retention	FALSE	canonical	3	50	junction_6	145.842166399159	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701941	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.63	chr1	+	4665	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	191.584576623485	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701941	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725684_127725798_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.64	chr1	+	4639	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	41	-16	intron_retention	FALSE	canonical	3	45	junction_6	179.561193530847	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTGATTTTTACAG	NA	False	NA	11	True	ATTAAA	-5	NA	127701941	127733653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.65	chr1	+	4795	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	43	-168	intron_retention	FALSE	canonical	3	45	junction_6	206.314634466539	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTGGTGCTAATGAT	NA	False	NA	7	True	AATAAA	-16	NA	127701943	127733501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.66	chr1	+	6789	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	195.853644336785	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701944	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723818_127723904_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.67	chr1	+	5098	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	44	227	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	206.172646100301	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTATAAGTAGCCATA	NA	False	NA	NA	False	AATAAA	-16	NA	127701944	127733896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.68	chr1	+	6518	9	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	44	11	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	207.369085207993	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTTTAAGTTTATGT	NA	False	NA	19	True	AATAAA	-33	NA	127701944	127735809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127722991_127723055_127725577_127725624_127727154_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.69	chr1	+	3228	7	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	44	-1200	intron_retention	FALSE	canonical	0	0	junction_4	184.797186125763	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGTGCATTGTAC	NA	False	NA	8	True	AATAAA	-15	NA	127701944	127732469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127727154_127727291_127729342_127729414_127729898
ES.1240.7	chr1	+	8896	6	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	-7	383	intron_retention	FALSE	canonical	1	1	junction_2	190.605981018435	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701893	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127721094_127721156_127722991_127727291_127729342_127729414_127729898
ES.1240.70	chr1	+	4781	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	45	-170	intron_retention	FALSE	canonical	3	163	junction_8	111.086396556914	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCATTGGTGCTAATG	NA	False	NA	5	True	AATAAA	-14	NA	127701945	127733499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127731031_127731128
ES.1240.71	chr1	+	4481	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	45	-170	intron_retention	FALSE	canonical	3	45	junction_6	179.561193530847	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCATTGGTGCTAATG	NA	False	NA	5	True	AATAAA	-14	NA	127701945	127733499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.72	chr1	+	3667	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	45	-1196	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	202.663292186819	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGCATTGTACCTGT	NA	False	NA	12	True	AATAAA	-19	NA	127701945	127732473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.73	chr1	+	3641	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	45	825	45	-825	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAATTGTAATTTTATT	NA	False	NA	NA	False	TATAAA	-13	NA	127701945	127732844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.74	chr1	+	3584	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	45	-1192	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATTGTACCTGTATTT	NA	False	NA	16	True	AATAAA	-23	NA	127701945	127732477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.75	chr1	+	5526	7	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	46	1	intron_retention	FALSE	canonical	1	1	junction_3	213.175006352371	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701946	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702920_127719341_127719471_127721094_127721156_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.76	chr1	+	6904	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701946	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.77	chr1	+	4433	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	46	-1	intron_retention	FALSE	canonical	1	1	junction_2	161.927547416259	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGATTGTGTGAACTAT	NA	False	NA	26	True	ATTAAA	-20	NA	127701946	127733668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.78	chr1	+	4967	10	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	46	0	intron_retention	FALSE	canonical	3	20	junction_6	210.372215693524	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701946	127733669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.79	chr1	+	4330	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	46	-168	intron_retention	FALSE	canonical	0	0	junction_9	152.596781675689	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTGGTGCTAATGAT	NA	False	NA	7	True	AATAAA	-16	NA	127701946	127733501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127730801_127730865
ES.1240.8	chr1	+	3440	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	-7	3305	-7	-1176	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAGCTTATGGTCATT	NA	False	NA	32	True	AATAAA	-39	NA	127701893	127732493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.80	chr1	+	6828	9	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	47	-170	intron_retention	FALSE	non_canonical	0	0	junction_5	161.834019909289	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCATTGGTGCTAATG	NA	False	NA	5	True	AATAAA	-14	NA	127701947	127733499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723818_127723904_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.81	chr1	+	6194	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	47	227	intron_retention	FALSE	canonical	3	163	junction_8	110.48522242816	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTTATAAGTAGCCATA	NA	False	NA	NA	False	AATAAA	-16	NA	127701947	127733896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.82	chr1	+	5451	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	47	383	intron_retention	FALSE	canonical	2	8	junction_5	217.864098538742	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701947	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.83	chr1	+	4592	9	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	50	-163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	215.807640040847	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTGCTAATGATGGACA	NA	False	NA	12	True	AATAAA	-21	NA	127701950	127733506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127725577_127725934_127727079_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.84	chr1	+	6770	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	50	-5	intron_retention	FALSE	canonical	3	45	junction_6	179.561193530847	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATCCAAGGCTGAAACA	NA	False	NA	3	True	AATAAA	-17	NA	127701950	127735793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.85	chr1	+	5147	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	51	377	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGAGTGACTCATTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	127701951	127734046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.86	chr1	+	5130	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	51	383	intron_retention	FALSE	canonical	2	8	junction_5	189.456532686993	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCATTCTTAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	127701951	127734052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.87	chr1	+	4685	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	51	-225	51	225	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCTTATAAGTAGCCA	NA	False	NA	NA	False	AATAAA	-14	NA	127701951	127733894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.88	chr1	+	4386	9	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	51	-165	intron_retention	FALSE	non_canonical	0	0	junction_7	161.544111622801	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTGCTAATGATGGA	NA	False	NA	10	True	AATAAA	-19	NA	127701951	127733504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727284_127729342_127729414_127729898
ES.1240.89	chr1	+	5409	8	ISM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	52	-367	52	367	intron_retention	FALSE	canonical	3	399	junction_6	48.5264497622751	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATCCTATAAAAGAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	127701952	127734036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342
ES.1240.9	chr1	+	6584	9	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	172.705674486972	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701895	127735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ES.1240.91	chr1	+	7182	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	52	-3	intron_retention	FALSE	canonical	2	8	junction_5	214.017883180326	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAAGGCTGAAACATG	NA	False	NA	5	True	AATAAA	-19	NA	127701952	127735795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725267_127725457_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.92	chr1	+	5041	8	ISM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	52	1	52	-1	intron_retention	FALSE	canonical	3	399	junction_6	48.5264497622751	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGATTGTGTGAACTAT	NA	False	NA	26	True	ATTAAA	-20	NA	127701952	127733668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342
ES.1240.94	chr1	+	5295	7	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	53	-1249	intron_retention	FALSE	canonical	3	419	junction_5	42.1768762343644	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTCTTGATTCTTTTA	NA	False	NA	24	True	ATTAAA	-4	NA	127701953	127732420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342
ES.1240.95	chr1	+	5038	11	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	53	-162	intron_retention	FALSE	canonical	2	2	junction_6	229.053181597637	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGCTAATGATGGACAG	NA	False	NA	13	True	AATAAA	-22	NA	127701953	127733507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127724585_127724724_127725267_127725464_127725577_127725934_127727126_127727291_127729342_127729414_127729898
ES.1240.96	chr1	+	4879	10	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	53	229	intron_retention	FALSE	canonical	3	20	junction_6	184.792843643168	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTATAAGTAGCCATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	127701953	127733898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725464_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ES.1240.97	chr1	+	6060	8	NIC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	53	1	intron_retention	FALSE	canonical	3	419	junction_5	43.9006299057593	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	False	NA	28	True	ATTAAA	-22	NA	127701953	127733670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127727291_127729342_127729414_127729898
ES.1240.98	chr1	+	4590	9	NNC	ENSMUSG00000026349.15	novel	6738	9	NA	NA	53	2	intron_retention	FALSE	non_canonical	0	0	junction_6	161.776079814044	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGTGTGAACTATTCA	NA	False	NA	29	True	ATTAAA	-23	NA	127701953	127733671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727094_127727291_127729342_127729414_127729898
ES.1240.99	chr1	+	4319	23	Fusion	ENSMUSG00000036104.13_ENSMUSG00000026349.15	novel	4511	10	NA	NA	53	14	multi-exon	FALSE	canonical	0	0	junction_2	90.8207411596789	932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTCTCCCCGAGAGCT	NA	False	NA	32	True	AATAAA	-29	NA	127701953	127871619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_127702123_127702837_127702920_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ES.12400.1	chr15	+	2077	2	FSM	ENSMUSG00000068099.6	ENSMUST00000143238.2	1552	2	-526	1	-526	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTACGGTTGTCTCTGT	NA	False	NA	16	True	AATAAA	-28	NA	82139697	82144953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82140587_82143765
ES.12401.1	chr15	-	127	1	Intergenic	novelGene_10373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	82151043	82150916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82150900_82151000
ES.12402.1	chr15	+	4796	10	FSM	ENSMUSG00000022456.19	ENSMUST00000116423.3	2397	10	109	-2508	9	0	multi-exon	FALSE	canonical	2	4	junction_1	12.7017059221718	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159202	82178775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82159255_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.11	chr15	+	6088	9	NIC	ENSMUSG00000022456.19	novel	4992	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	32	junction_7	5.78251675311019	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159452	82178775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82174657_82174938
ES.12402.12	chr15	+	3035	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	36	1921	-1	587	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAAGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	82159475	82176854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.13	chr15	+	2514	12	FSM	ENSMUSG00000022456.19	ENSMUST00000230365.2	1888	12	89	-715	-35	-4	multi-exon	FALSE	canonical	1	1	junction_10	16.125028028677	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGCCTGGTCTTTGTC	NA	False	NA	NA	False	ACTAAA	-17	NA	82159565	82178771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82175453_82175520_82177446
ES.12402.2	chr15	+	4649	9	NIC	ENSMUSG00000022456.19	novel	2397	10	NA	NA	19	-8	intron_retention	FALSE	canonical	0	0	junction_2	17.8798070459387	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGGCCTGGTCTT	NA	False	NA	NA	False	ACTAAA	-13	NA	82159212	82178767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82159255_82163615_82163808_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.3	chr15	+	1667	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	-33	3358	-33	-850	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCATTCTGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	82159406	82175417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.4	chr15	+	5025	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	-33	0	-33	0	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159406	82178775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.5	chr15	+	2595	11	NIC	ENSMUSG00000022456.19	novel	1888	12	NA	NA	-25	-8	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	9.47048045243746	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGGCCTGGTCTT	NA	False	NA	NA	False	ACTAAA	-13	NA	82159414	82178767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ES.12402.6	chr15	+	1509	11	NNC	ENSMUSG00000022456.19	novel	4992	10	NA	NA	-20	-851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.3656275572829	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTCCATTCTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	82159419	82175416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82159490_82159633_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.7	chr15	+	4797	10	NNC	ENSMUSG00000022456.19	novel	4992	10	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_1	13.833221775543	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGCCTGGTCTTTGTCT	NA	False	NA	NA	False	ACTAAA	-18	NA	82159428	82178772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82159485_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.8	chr15	+	8453	9	NIC	ENSMUSG00000022456.19	novel	4992	10	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	32	junction_6	5.92531644724567	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCCTGGTCTTTGTCTT	NA	False	NA	NA	False	ACTAAA	-19	NA	82159428	82178773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82159688_82163615_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ES.12402.9	chr15	+	4579	11	ISM	ENSMUSG00000022456.19	ENSMUST00000230365.2	1888	12	-48	-716	-11	-3	intron_retention	FALSE	canonical	1	1	junction_10	13.0938917056771	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGCCTGGTCTTTGTCT	NA	False	NA	NA	False	ACTAAA	-18	NA	82159428	82178772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82175453
ES.12403.1	chr15	-	158	1	Intergenic	novelGene_10374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	1235	False	NA	NA	False	NA	NA	NA	82165693	82165535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82165500_82165700
ES.12404.1	chr15	+	4189	5	NIC	ENSMUSG00000022455.5	novel	1413	6	NA	NA	-14	2498	intron_retention	FALSE	canonical	3	14	junction_2	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATGGTCAGTAATTTC	1986	False	NA	3	True	AATAAA	-16	NA	82183140	82201322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82183270_82189871_82190387_82190546_82190640_82192723_82192829_82197975
ES.12404.2	chr15	+	1906	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	-7	-486	-7	486	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTTTCATACAGTGT	1993	False	NA	NA	False	NA	NA	NA	82183147	82199310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ES.12404.3	chr15	+	3907	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	4	-2498	4	2498	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATGGTCAGTAATTTC	2004	False	NA	3	True	AATAAA	-16	NA	82183158	82201322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ES.12404.4	chr15	+	3684	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	5	-2276	5	2276	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGAGGTGTGTTATATA	2005	False	NA	NA	False	ATTAAA	-15	NA	82183159	82201100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ES.12404.5	chr15	+	4438	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	12	-3037	12	3037	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTCTGGGAATTT	2012	False	NA	NA	False	NA	NA	NA	82183166	82201861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ES.12404.6	chr15	+	5504	1	Genic_Genomic	ENSMUSG00000022455.5	novel	NA	NA	NA	NA	12664	2498	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATGGTCAGTAATTTC	NA	False	NA	3	True	AATAAA	-16	NA	82195818	82201322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_82195800_82201300
ES.12405.1	chr15	-	178	1	Intergenic	novelGene_10375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTCCCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	82202065	82201887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82201900_82202100
ES.12406.1	chr15	-	2832	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-30	-889	24	889	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTCTCAATAGTAGC	1314	False	NA	NA	False	NA	NA	NA	82223057	82212843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.10	chr15	-	1687	8	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	14	-17	combination_of_known_splicesites	FALSE	canonical	2	27	junction_6	115.458624093443	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTCTAATCAAC	1304	False	NA	-17	True	AATAAA	-14	NA	82223067	82213749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222952
ES.12406.12	chr15	-	2077	8	NNC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	7	-587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.302537389903	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGCTAGAAGGCCCTTT	1395	False	NA	NA	False	NA	NA	NA	82222976	82215521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82216732_82218963_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.13	chr15	-	1918	7	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-4	-587	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	98.93712930723	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGCTAGAAGGCCCTTT	1359	False	NA	NA	False	NA	NA	NA	82223012	82215521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
ES.12406.14	chr15	-	2104	8	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-1	1791	-1	-589	5prime_fragment	FALSE	canonical	3	267	junction_4	10.9916480352408	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACGCTAGAAGGCCCT	1343	False	NA	NA	False	NA	NA	NA	82223028	82215523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.15	chr15	-	1647	8	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-9	2256	-9	-1054	5prime_fragment	FALSE	canonical	3	267	junction_4	10.9916480352408	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCTGTTTGTTGAGCA	1335	False	NA	NA	False	NA	NA	NA	82223036	82215988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.16	chr15	-	1216	7	FSM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	-33	-163	-8	163	multi-exon	FALSE	canonical	3	267	junction_3	11.7106314470608	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTGTGTTGGGGTCT	1355	False	NA	NA	False	ACTAAA	-12	NA	82223016	82218654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.17	chr15	-	1056	7	FSM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	-34	-2	-9	2	multi-exon	FALSE	canonical	3	267	junction_3	11.7106314470608	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTTTTCCTACTTCT	1354	False	NA	NA	False	NA	NA	NA	82223017	82218815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.2	chr15	-	2589	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-5	887	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGTCTCAATAGTA	2	True	NA	NA	False	NA	NA	NA	82222988	82212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
ES.12406.3	chr15	-	2005	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	-107	15	-8	-15	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1237	False	NA	-15	True	AATAAA	-16	NA	82223134	82213747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ES.12406.4	chr15	-	1857	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-32	-15	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1213	False	NA	-15	True	AATAAA	-16	NA	82223158	82213747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
ES.12406.5	chr15	-	1872	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1344	False	NA	-15	True	AATAAA	-16	NA	82223027	82213747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
ES.12406.6	chr15	-	1791	9	NNC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-8	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.946568996273	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1355	False	NA	-15	True	AATAAA	-16	NA	82223016	82213747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82214390_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
ES.12406.7	chr15	-	1784	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-8	-15	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	93.5774244943726	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCTAATCAACCA	1355	False	NA	-15	True	AATAAA	-16	NA	82223016	82213747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222952
ES.12406.8	chr15	-	1699	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	113.55587831548	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTTTCTAATCAACC	1344	False	NA	-16	True	AATAAA	-15	NA	82223027	82213748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221698_82222438_82222516_82222952
ES.12406.9	chr15	-	1920	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	-1	-16	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTTTCTAATCAACC	1244	False	NA	-16	True	AATAAA	-15	NA	82223127	82213748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
ES.12407.1	chr15	+	2793	2	FSM	ENSMUSG00000049687.6	ENSMUST00000050349.3	2745	2	-13	-35	-13	2	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATAAATTC	NA	False	NA	NA	False	NA	NA	NA	82225366	82229946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82225473_82227259
ES.12408.1	chr15	-	2420	1	Antisense	novelGene_ENSMUSG00000049687.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTGGACATCAAAACAC	NA	False	NA	NA	False	NA	NA	NA	82229698	82227278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_82227300_82229700
ES.12409.1	chr15	+	682	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	801.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCTTGGTTGCACTTT	NA	False	NA	61	True	AATAAA	-43	NA	82230170	82233291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82230471_82232100_82232242_82233050
ES.12409.2	chr15	+	603	3	FSM	ENSMUSG00000022452.17	ENSMUST00000161892.2	597	3	-33	27	27	5	multi-exon	FALSE	canonical	3	88	junction_1	632.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	35	True	AATAAA	-17	NA	82230181	82233265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82230422_82232100_82232242_82233043
ES.12409.3	chr15	+	655	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	53	-3	-7	2	multi-exon	FALSE	canonical	3	1353	junction_2	125	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGTTGCACTTTATT	NA	False	NA	64	True	NA	NA	NA	82230207	82233294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82230471_82232100_82232242_82233043
ES.12409.4	chr15	+	557	3	NNC	ENSMUSG00000022452.17	novel	597	3	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	35	True	AATAAA	-17	NA	82230220	82233265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82230422_82232100_82232242_82233050
ES.12409.6	chr15	+	2198	2	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	-19	5	intron_retention	FALSE	canonical	0	0	junction_1	0	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	35	True	AATAAA	-17	NA	82230258	82233265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82232242_82233050
ES.12409.7	chr15	+	507	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCGTCCCCATTTCTC	NA	False	NA	35	True	AATAAA	-17	NA	82230259	82233265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82230411_82232100_82232242_82233050
ES.1241.1	chr1	+	526	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	-47	-65	-47	65	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCATGTCAATTCTGTC	NA	False	NA	NA	False	AATAAA	-42	NA	127966258	127966784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_127966300_127966800
ES.12410.1	chr15	-	560	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	31	-1	31	1	multi-exon	FALSE	canonical	3	3916	junction_1	175	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCTCTCTTACTTC	6243	False	NA	-12	True	GATAAA	-22	NA	82238492	82234339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82234573_82235179_82235296_82238281
ES.12410.2	chr15	-	3541	2	FSM	ENSMUSG00000022450.7	ENSMUST00000230589.2	440	2	-3080	-21	-33	0	multi-exon	FALSE	canonical	3	3916	junction_1	0	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	6247	False	NA	-13	True	GATAAA	-21	NA	82238488	82234340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82234573_82235179
ES.12410.3	chr15	-	512	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	1922.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGAACCCCTTTCCT	6291	False	NA	-29	True	AATAAA	-34	NA	82238444	82234356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82234573_82235179_82235313_82238281
ES.12410.4	chr15	-	4106	1	FSM	ENSMUSG00000022450.7	ENSMUST00000229283.2	1141	1	-35	-2930	-18	3	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAAATTGCACTGGTGA	6262	False	NA	-40	True	AATAAA	-23	NA	82238473	82234367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_82234400_82238500
ES.12410.5	chr15	-	525	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	1954	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTGGTTGTGATAAAAT	6285	False	NA	-51	True	AATAAA	-12	NA	82238450	82234378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82234573_82235179_82235296_82238235
ES.12411.1	chr15	+	9331	3	Intergenic	novelGene_10376	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	82238595	82252083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82243282_82246735_82250000_82250702
ES.12411.2	chr15	+	2394	2	Intergenic	novelGene_10378	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGGTCTCAGTGTCT	2859	False	NA	NA	False	NA	NA	NA	82247691	82252082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82248762_82250758
ES.12412.1	chr15	-	3225	2	Intergenic	novelGene_10377	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCTTGGGTATAACAGAA	551	False	NA	NA	False	NA	NA	NA	82249146	82242467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82243281_82246734
ES.12413.1	chr15	-	224	1	Intergenic	novelGene_10379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCATTAAAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	82457682	82457458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82457500_82457700
ES.12414.1	chr15	-	179	1	Intergenic	novelGene_10380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	82474621	82474442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82474400_82474600
ES.12415.1	chr15	-	1318	2	Intergenic	novelGene_10381	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACCTTTAATTTTTA	1387	False	NA	NA	False	AATAAA	-16	NA	82691715	82690009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82690543_82690930
ES.12416.1	chr15	+	4207	1	Antisense	novelGene_ENSMUSG00000041852.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82693920	82698127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_82693900_82698100
ES.12417.1	chr15	+	177	1	Intergenic	novelGene_10383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATAACTTA	NA	False	NA	NA	False	NA	NA	NA	82719234	82719411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82719200_82719400
ES.12417.2	chr15	+	174	2	Antisense	novelGene_ENSMUSG00000041852.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	82719235	82763450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_82719307_82763347
ES.12417.3	chr15	+	302	1	Intergenic	novelGene_10386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGGTGTAGGCAGG	NA	False	NA	NA	False	TTTAAA	-33	NA	82755828	82756130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82755800_82756100
ES.12417.4	chr15	+	231	1	Intergenic	novelGene_10388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAAAACACCAACGAAGT	NA	False	NA	NA	False	NA	NA	NA	82763264	82763495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82763300_82763500
ES.12418.1	chr15	+	1530	1	Intergenic	novelGene_10389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGTAGAGAAGGGATA	NA	False	NA	NA	False	NA	NA	NA	82767081	82768611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82767100_82768600
ES.12419.1	chr15	+	776	3	NIC	ENSMUSG00000100199.2	novel	1118	4	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTGTGGTCCTATGA	NA	False	NA	NA	False	AATAAA	-17	NA	82783265	82790016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82783470_82785916_82786016_82789543
ES.12419.2	chr15	+	4287	2	NIC	ENSMUSG00000100199.2	novel	1118	4	NA	NA	2	-3	intron_retention	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTGTGGTCCTATGA	NA	False	NA	NA	False	AATAAA	-17	NA	82783282	82790016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82783470_82785916
ES.1242.1	chr1	-	3343	3	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAACAAAAAACAAAAA	1842	False	NA	NA	False	AATAAA	-44	NA	127731112	127725232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127727290_127729341_127729413_127729897
ES.1242.2	chr1	-	3799	2	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	1843	False	NA	NA	False	AATAAA	-16	NA	127731111	127725260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127727290_127729341
ES.1242.3	chr1	-	5844	1	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	1849	False	NA	NA	False	AATAAA	-15	NA	127731105	127725261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127725300_127731100
ES.1242.4	chr1	-	1810	4	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	1843	False	NA	NA	False	AATAAA	-15	NA	127731111	127725261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127725621_127727123_127727290_127729341_127729413_127729897
ES.1242.5	chr1	-	1736	2	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACCAAAACAAAAACCC	1595	False	NA	NA	False	NA	NA	NA	127731359	127729138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127729413_127729897
ES.1242.6	chr1	-	2221	1	Antisense	novelGene_ENSMUSG00000026349.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACCAAAACAAAAACCC	1595	False	NA	NA	False	NA	NA	NA	127731359	127729138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_127729100_127731400
ES.12420.1	chr15	-	7583	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGTGAATGTGTCTC	9168	False	NA	0	True	AATAAA	-33	NA	82784012	82692631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.10	chr15	-	7697	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	-305	-14	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	57.1505686760858	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTTTTTCATTTAC	4666	False	NA	-19	True	AATAAA	-14	NA	82848064	82692650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82847621
ES.12420.12	chr15	-	1786	5	NNC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	34	-76	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	49.7543967906355	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAATCAAAAA	9202	False	NA	-81	True	GATAAA	-28	NA	82783978	82692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82698681_82698772_82699811_82699862_82709431_82709526_82783702
ES.12420.13	chr15	-	7432	5	Fusion	ENSMUSG00000100552.2_ENSMUSG00000041852.16	novel	7417	5	NA	NA	17	-76	multi-exon	FALSE	canonical	0	0	junction_4	57.1505686760858	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAATCAAAAA	NA	False	NA	-81	True	GATAAA	-28	NA	82872056	82692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82871816
ES.12420.14	chr15	-	1665	4	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	60	-81	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	61.3568795382121	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTAAAAAAACAAAAATC	9228	False	NA	-86	True	GATAAA	-23	NA	82783952	82692717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82783702
ES.12420.15	chr15	-	6907	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	1	-480	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTTTATTTT	9169	False	NA	-2	True	AATAAA	-22	NA	82784011	82693306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.16	chr15	-	6867	5	NNC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	290	-483	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	56.7274184147313	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTATTTATTTTTAT	9458	False	NA	-5	True	AATAAA	-19	NA	82783722	82693309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783450
ES.12420.17	chr15	-	6964	6	NNC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	31	-483	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	49.3599027551716	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTATTTATTTTTAT	9199	False	NA	-5	True	AATAAA	-19	NA	82783981	82693309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82698681_82698772_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.18	chr15	-	6724	5	NNC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	-9145	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.1505686760858	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTATTTATTTATTTT	8445	False	NA	-8	True	AATAAA	-16	NA	82805480	82693312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82805348
ES.12420.19	chr15	-	1110	4	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	18	-488	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	61.3568795382121	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACTATTTATTTATT	9186	False	NA	-10	True	AATAAA	-14	NA	82783994	82693314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82783702
ES.12420.2	chr15	-	7659	6	NIC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	31	-11	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	48.2327689439452	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	9199	False	NA	-16	True	AATAAA	-17	NA	82783981	82692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82698681_82698805_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.20	chr15	-	6821	5	Fusion	ENSMUSG00000100552.2_ENSMUSG00000041852.16	novel	7417	5	NA	NA	-16	-488	multi-exon	FALSE	canonical	0	0	junction_4	57.1505686760858	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACTATTTATTTATT	NA	False	NA	-10	True	AATAAA	-14	NA	82872047	82693314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82871816
ES.12420.22	chr15	-	6494	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	52	-842	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGTCTGGAAAGACT	9220	False	NA	NA	False	TATAAA	-4	NA	82783960	82693668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.23	chr15	-	6655	6	NIC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	13	-843	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	48.2327689439452	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAGTCTGGAAAGAC	9181	False	NA	NA	False	TATAAA	-3	NA	82783999	82693669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82693989_82698681_82698805_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.24	chr15	-	4613	1	Intergenic	novelGene_10382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCACTGTCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	82708521	82703908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82703900_82708500
ES.12420.25	chr15	-	4999	1	Intergenic	novelGene_10384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACATATATGTATATG	NA	False	NA	NA	False	NA	NA	NA	82749527	82744528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82744500_82749500
ES.12420.26	chr15	-	2132	1	Intergenic	novelGene_10385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTAAGAGAGGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	82752884	82750752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82750800_82752900
ES.12420.27	chr15	-	205	1	Intergenic	novelGene_10387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAAATGGTATGTCAG	6438	False	NA	NA	False	NA	NA	NA	82757746	82757541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82757500_82757700
ES.12420.3	chr15	-	2321	1	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	89044	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	NA	False	NA	-16	True	AATAAA	-17	NA	82694968	82692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_82692600_82695000
ES.12420.5	chr15	-	7691	6	NNC	ENSMUSG00000041852.16	novel	7323	6	NA	NA	-34	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	49.3599027551716	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	9134	False	NA	-16	True	AATAAA	-17	NA	82784046	82692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82698681_82698772_82699811_82699862_82709431_82709526_82735713_82741486_82783702
ES.12420.6	chr15	-	5417	5	NNC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	44511	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.7889393834829	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	NA	False	NA	-16	True	AATAAA	-17	NA	82739501	82692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82695161_82695306_82699811_82699862_82709431_82709526_82735713
ES.12420.7	chr15	-	7349	5	NNC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	673	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	56.7274184147313	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTTTTCATTTACTCT	9841	False	NA	-16	True	AATAAA	-17	NA	82783339	82692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783247
ES.12420.8	chr15	-	9310	5	NNC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	49	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.1505686760858	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTTTTCATTTACT	9217	False	NA	-18	True	AATAAA	-15	NA	82783963	82692649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82781908
ES.12421.1	chr15	+	204	1	Intergenic	novelGene_10390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAAGGCTTTGACCACG	872	False	NA	NA	False	NA	NA	NA	82899943	82900147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82899900_82900100
ES.12422.1	chr15	+	185	1	Intergenic	novelGene_10391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTTTTGTTTGTAGCT	NA	False	NA	NA	False	AATACA	-37	NA	82915157	82915342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82915200_82915300
ES.12423.1	chr15	-	1388	1	ISM	ENSMUSG00000058099.17	ENSMUST00000231165.2	7634	6	35205	3741	24982	1007	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGCATCCCTCTCAGG	6900	False	NA	NA	False	NA	NA	NA	82882302	82880914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_82880900_82882300
ES.12423.2	chr15	-	2853	7	NNC	ENSMUSG00000058099.17	novel	7634	6	NA	NA	-12098	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	0.372677996249965	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGACCCATTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	82929605	82881923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82883997_82885615_82885703_82894575_82894675_82899115_82899229_82900544_82900863_82925524_82925609_82929526
ES.12423.3	chr15	-	2683	6	NNC	ENSMUSG00000058099.17	novel	7634	6	NA	NA	-9058	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.4	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTTCCGTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	82926565	82881996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_82883997_82885615_82885703_82894575_82894675_82899115_82899229_82900544_82900863_82926499
ES.12423.4	chr15	-	157	1	Intergenic	novelGene_10392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAGAAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	82920856	82920699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82920700_82920900
ES.12424.1	chr15	+	177	1	Intergenic	novelGene_10393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTGT	NA	False	NA	NA	False	NA	NA	NA	82957194	82957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82957200_82957400
ES.12425.1	chr15	+	137	1	Intergenic	novelGene_10394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAGACACACA	NA	False	NA	NA	False	NA	NA	NA	82957433	82957570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82957400_82957600
ES.12426.1	chr15	-	177	1	Intergenic	novelGene_10395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	6806	False	NA	NA	False	NA	NA	NA	82981077	82980900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_82980900_82981100
ES.12427.1	chr15	+	225	1	Intergenic	novelGene_10396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGCAAAAAATAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	82981491	82981716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_82981500_82981700
ES.12428.1	chr15	+	1372	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	1	-2	1	2	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTGGCTGTTGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	82984405	83000877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.10	chr15	+	3420	4	ISM	ENSMUSG00000058586.13	ENSMUST00000167635.8	1013	5	-262	-1018	-262	0	intron_retention	FALSE	canonical	3	73	junction_1	4.08248290463863	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	17	True	AATAAA	-18	NA	82987635	83000875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82988623_82989811_82989892_82996410_82996446_82998557
ES.12428.11	chr15	+	1699	1	Genic_Genomic	ENSMUSG00000058586.13	novel	NA	NA	NA	NA	97	26	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACGAGGAGGGGCCAAA	NA	False	NA	NA	False	NA	NA	NA	82990872	82992571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_82990900_82992600
ES.12428.12	chr15	+	701	4	ISM	ENSMUSG00000058586.13	ENSMUST00000167750.8	383	5	5561	-276	-734	-3	3prime_fragment	FALSE	canonical	3	79	junction_3	5.8878405775519	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGAGTTCCAAGTGGCT	NA	False	NA	11	True	AATAAA	-12	NA	82996336	83000869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.13	chr15	+	4613	1	Genic_Genomic	ENSMUSG00000058586.13	novel	NA	NA	NA	NA	975	1783	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCCCCACCCCTGTC	NA	False	NA	NA	False	NA	NA	NA	82998045	83002658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_82998000_83002700
ES.12428.4	chr15	+	1336	11	NNC	ENSMUSG00000058586.13	novel	1371	12	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.311854930052	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	17	True	AATAAA	-18	NA	82984440	83000875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986546_82987117_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.5	chr15	+	4167	9	NIC	ENSMUSG00000058586.13	novel	2577	11	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	56	junction_1	9.86708543593294	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGAGTTCCAAGTGGCT	NA	False	NA	11	True	AATAAA	-12	NA	82984487	83000869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.6	chr15	+	2710	12	NNC	ENSMUSG00000058586.13	novel	1371	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	2	junction_6	29.495202019121	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	False	NA	13	True	AATAAA	-14	NA	82984488	83000871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82988623_82989006_82989134_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.7	chr15	+	3855	9	NIC	ENSMUSG00000058586.13	novel	2577	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	27.4610519645552	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	17	True	AATAAA	-18	NA	82984496	83000875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82985995_82986072_82986187_82986499_82986542_82987134_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.8	chr15	+	2899	10	NIC	ENSMUSG00000058586.13	novel	2577	11	NA	NA	-297	-1	intron_retention	FALSE	canonical	3	56	junction_1	10.4468082431495	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	False	NA	13	True	AATAAA	-14	NA	82985468	83000871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12428.9	chr15	+	2459	10	NIC	ENSMUSG00000058586.13	novel	2577	11	NA	NA	183	-1	intron_retention	FALSE	canonical	0	0	junction_4	25.9619855049267	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	False	NA	13	True	AATAAA	-14	NA	82985948	83000871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986886_82987134_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ES.12429.1	chr15	-	3714	6	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	832	junction_3	37.3930474821189	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCTCCTGAGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	83006952	83000046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83006176_83006862
ES.12429.10	chr15	-	3814	4	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	11	-1	intron_retention	FALSE	canonical	3	838	junction_1	88.0201997018614	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006941	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001173_83001749_83004219_83006032_83006176_83006862
ES.12429.11	chr15	-	2950	6	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4	junction_4	371.367419141744	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006940	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83003714_83004219_83006032
ES.12429.12	chr15	-	1877	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_6	344.356606183506	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006941	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006167_83006862
ES.12429.13	chr15	-	2462	6	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	12	-1	intron_retention	FALSE	canonical	3	832	junction_2	74.064836461036	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006940	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ES.12429.14	chr15	-	2917	6	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	838	junction_1	72.7142351950428	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006962	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001173_83001749_83001949_83002277_83003504_83004092_83004219_83006032_83006176_83006862
ES.12429.15	chr15	-	1890	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	343.145094028103	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006951	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001943_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ES.12429.16	chr15	-	1884	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	343.145094028103	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006951	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001949_83002289_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ES.12429.2	chr15	-	4406	5	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	43	2415	-7	0	intron_retention	FALSE	canonical	3	832	junction_3	36.8264510915727	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006959	83000048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092
ES.12429.3	chr15	-	1947	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	1	2415	1	0	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83007001	83000048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ES.12429.4	chr15	-	1874	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	9	junction_4	343.775928315071	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006959	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003474_83004092_83004219_83006032_83006176_83006862
ES.12429.6	chr15	-	1945	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	-127	-1	intron_retention	FALSE	canonical	0	0	junction_6	344.356606183506	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006477	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006339
ES.12429.7	chr15	-	1904	7	NNC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	344.356606183506	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006940	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006195_83006862
ES.12429.8	chr15	-	2476	6	NIC	ENSMUSG00000018040.10	novel	4363	7	NA	NA	10	-1	intron_retention	FALSE	canonical	3	832	junction_3	78.8517596506254	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGTCTCTCCTGAGC	NA	False	NA	NA	False	AATAAA	-12	NA	83006942	83000049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83004219_83006032_83006176_83006862
ES.1243.1	chr1	-	2352	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127738373	127736021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_127736000_127738400
ES.12430.1	chr15	+	170	1	Intergenic	novelGene_10397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83009549	83009719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83009500_83009700
ES.12431.1	chr15	-	2163	1	Genic_Genomic	ENSMUSG00000041815.15	novel	NA	NA	NA	NA	8600	827	mono-exon	FALSE	NA	NA	NA	NA	NA	610	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83011512	83009349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_83009300_83011500
ES.12431.11	chr15	-	3754	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	211.39207500519	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033504	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83022724_83033395
ES.12431.12	chr15	-	6092	5	NNC	ENSMUSG00000041815.15	novel	3157	8	NA	NA	206	0	intron_retention	FALSE	non_canonical	0	0	junction_1	283.030364978742	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	3149	False	NA	-13	True	AATAAA	-15	NA	83019906	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83016856_83017347_83017528_83019494
ES.12431.14	chr15	-	5306	8	NIC	ENSMUSG00000041815.15	novel	3157	8	NA	NA	14	0	intron_retention	FALSE	canonical	3	496	junction_6	58.5135602633601	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033516	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83021756_83022332_83022724_83033395
ES.12431.15	chr15	-	3713	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	206.729291586848	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033548	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.17	chr15	-	3091	8	NNC	ENSMUSG00000041815.15	novel	3157	8	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	266.569438057183	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033472	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022718_83033395
ES.12431.18	chr15	-	3185	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	-8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGAGCTATAATGTC	NA	False	NA	-14	True	AATAAA	-14	NA	83033510	83010179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011523_83011558_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.19	chr15	-	3105	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.914758965845	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGAGCTATAATGTC	NA	False	NA	-14	True	AATAAA	-14	NA	83033529	83010179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83021668_83021756_83022332_83022724_83033395
ES.12431.2	chr15	-	3301	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	3	-5	3	5	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATAATGTCTTTTTTCA	NA	False	NA	-6	True	AATAAA	-22	NA	83033582	83010171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.23	chr15	-	4948	7	NNC	ENSMUSG00000041815.15	novel	3157	8	NA	NA	-2280	-1	intron_retention	FALSE	canonical	0	0	junction_6	235.973692036492	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGAGCTATAATGTC	8717	False	NA	-14	True	AATAAA	-14	NA	83022392	83010179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83020817_83021298
ES.12431.24	chr15	-	4195	8	NIC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	12	-1	intron_retention	FALSE	canonical	3	462	junction_5	79.3643111073927	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGAGCTATAATGTC	NA	False	NA	-14	True	AATAAA	-14	NA	83033518	83010179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83012257_83013394_83013462_83015681_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.25	chr15	-	3100	8	NIC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	12	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	214.875664095328	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAACTTTGAGCTATA	NA	False	NA	-19	True	AATAAA	-9	NA	83033490	83010184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83021668_83021756_83022332_83022724_83033395
ES.12431.26	chr15	-	3214	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	-10	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCCTAACTTTGAGCT	NA	False	NA	-22	True	AATAAA	-6	NA	83033547	83010187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011477_83011512_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.3	chr15	-	3261	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	4	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.638995176448	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATAATGTCTTTTTTCA	NA	False	NA	-6	True	AATAAA	-22	NA	83033581	83010171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12431.5	chr15	-	3162	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	-3	-2	2	0	multi-exon	FALSE	canonical	3	86	junction_6	194.457277192347	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033535	83010176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ES.12431.6	chr15	-	3152	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.479901297954	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033564	83010176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ES.12431.7	chr15	-	5859	8	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	224.165754999031	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033529	83010176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83022724_83033395
ES.12431.8	chr15	-	5247	9	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_1	210.263190727716	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033494	83010176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011513_83011551_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83021756_83022332_83022724_83033395
ES.12431.9	chr15	-	3193	10	NNC	ENSMUSG00000041815.15	novel	3299	9	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	199.638995176448	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033518	83010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83011492_83011528_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ES.12432.1	chr15	+	177	1	Intergenic	novelGene_10398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTACACAAAGCTTCTC	7987	False	NA	NA	False	NA	NA	NA	83043480	83043657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83043500_83043700
ES.12433.1	chr15	-	2090	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	332	0	332	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056461	83037694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ES.12433.11	chr15	-	1964	10	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	384	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	514.932238140654	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCAGCGTTTCTCT	NA	False	NA	-3	True	AGTAAA	-15	NA	83056409	83037697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038376_83038446_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ES.12433.15	chr15	-	1223	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	394	805	394	-805	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGCCATTACCAGAGAT	NA	False	NA	-119	True	NA	NA	NA	83056399	83038499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ES.12433.2	chr15	-	1907	10	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	514.932238140654	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCAGCGTTTCTCTG	NA	False	NA	-2	True	AGTAAA	-16	NA	83056395	83037696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038318_83038432_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ES.12433.6	chr15	-	1999	9	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	405	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	536.279763160051	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCAGCGTTTCTCTG	NA	False	NA	-2	True	AGTAAA	-16	NA	83056388	83037696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050403_83056323
ES.12433.7	chr15	-	2021	9	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	395	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	540.94777936507	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCAGCGTTTCTCTG	NA	False	NA	-2	True	AGTAAA	-16	NA	83056398	83037696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046498_83050271_83050408_83056312
ES.12433.8	chr15	-	1891	10	NNC	ENSMUSG00000018042.19	novel	2422	9	NA	NA	410	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	514.932238140654	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCAGCGTTTCTCT	NA	False	NA	-3	True	AGTAAA	-15	NA	83056383	83037697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038328_83038445_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ES.12433.9	chr15	-	1716	6	NNC	ENSMUSG00000018042.19	novel	1982	9	NA	NA	8573	-3	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_5	616.282922041492	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCAGCGTTTCTCT	7076	False	NA	-3	True	AGTAAA	-15	NA	83045805	83037697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83045715
ES.12434.1	chr15	+	2440	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	-5	24	-5	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	83056545	83058985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_83056500_83059000
ES.12435.1	chr15	+	174	1	Intergenic	novelGene_10399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAGATCGGG	NA	False	NA	NA	False	NA	NA	NA	83062400	83062574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83062400_83062600
ES.12436.1	chr15	+	168	1	Intergenic	novelGene_10400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAACAAAAACAGTC	NA	False	NA	NA	False	NA	NA	NA	83064745	83064913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83064700_83064900
ES.12437.1	chr15	+	5930	1	Intergenic	novelGene_10401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	83080361	83086291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83080400_83086300
ES.12438.1	chr15	+	172	1	Intergenic	novelGene_10405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5581	False	NA	NA	False	NA	NA	NA	83127818	83127990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83127800_83128000
ES.12439.1	chr15	+	272	1	Intergenic	novelGene_10406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCCATGGACACCAGG	NA	False	NA	NA	False	NA	NA	NA	83133363	83133635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83133400_83133600
ES.1244.1	chr1	-	179	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127773912	127773733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_127773700_127773900
ES.12440.1	chr15	+	134	1	Intergenic	novelGene_10407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83134113	83134247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83134100_83134200
ES.12441.1	chr15	-	2132	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	-36	-4	-36	4	multi-exon	FALSE	canonical	3	57	junction_2	20.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTCATGGTCACATCGT	2187	False	NA	-4	True	AATAAA	-20	NA	83136011	83110918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83112796_83114714_83114859_83135900
ES.12441.10	chr15	-	1832	1	Intergenic	novelGene_10404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCTTGGTCATAGT	8429	False	NA	NA	False	NA	NA	NA	83124866	83123034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83123000_83124900
ES.12441.2	chr15	-	2132	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	3	-161	1	3	multi-exon	FALSE	canonical	3	30	junction_2	34	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTCATGGTCACATCG	2269	False	NA	-5	True	AATAAA	-19	NA	83135929	83110919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83112796_83114714_83114859_83135817
ES.12441.3	chr15	-	1903	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTCATGGTCACATC	2270	False	NA	-6	True	AATAAA	-18	NA	83135928	83110920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83112796_83135900
ES.12441.4	chr15	-	4042	2	FSM	ENSMUSG00000047878.14	ENSMUST00000229454.2	360	2	5	-3687	5	-2	multi-exon	FALSE	canonical	3	30	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATGCCTCATGGTCA	2273	False	NA	-10	True	AATAAA	-14	NA	83135925	83110924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83114859_83135817
ES.12441.5	chr15	-	4056	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	-49	-4	intron_retention	FALSE	canonical	3	57	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTAATGCCTCATGGT	2174	False	NA	-12	True	AATAAA	-12	NA	83136024	83110926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83114859_83135900
ES.12441.6	chr15	-	1966	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	10	-2	8	2	multi-exon	FALSE	canonical	3	30	junction_2	34	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTTTTTTTTTTTT	2276	False	NA	NA	False	NA	NA	NA	83135922	83111078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83112796_83114714_83114859_83135817
ES.12441.7	chr15	-	3865	2	NIC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	-12	0	intron_retention	FALSE	canonical	3	57	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTTTTTTTTTT	2211	False	NA	NA	False	NA	NA	NA	83135987	83111080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83114859_83135900
ES.12441.8	chr15	-	811	1	Intergenic	novelGene_10402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATCCTTAGTGA	8519	False	NA	NA	False	NA	NA	NA	83114250	83113439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83113400_83114200
ES.12441.9	chr15	-	666	1	Intergenic	novelGene_10403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGATGTTGGGCCGGA	6907	False	NA	NA	False	NA	NA	NA	83121094	83120428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83120400_83121100
ES.12442.1	chr15	+	1326	1	Intergenic	novelGene_10408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGATGGTCCTTCGTGA	1535	False	NA	NA	False	NA	NA	NA	83155746	83157072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83155700_83157100
ES.12443.1	chr15	+	181	1	Intergenic	novelGene_10409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGTGAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	83164656	83164837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83164700_83164800
ES.12444.1	chr15	-	779	6	NNC	ENSMUSG00000054277.9	novel	741	2	NA	NA	40	40878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGGCGTGTGTACAT	NA	False	NA	NA	False	AATAAA	-16	NA	83189502	83143061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83143280_83155343_83155410_83169139_83169297_83172676_83172832_83187303_83187426_83189441
ES.12444.11	chr15	-	1169	3	FSM	ENSMUSG00000054277.9	ENSMUST00000226816.2	1186	3	-66	83	-66	-2	multi-exon	FALSE	canonical	2	5	junction_2	31.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGATTTCAGATGA	NA	False	NA	-110	True	AGTAAA	-24	NA	83189608	83184023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83184904_83187303_83187426_83189441
ES.12444.14	chr15	-	3055	17	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	18.328597873269	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAATGTGATTTCAGAT	3545	False	NA	-112	True	AGTAAA	-22	NA	83234428	83184025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83232285_83232825_83234281
ES.12444.15	chr15	-	2584	17	NNC	ENSMUSG00000054277.9	novel	2461	16	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	19.8364405829272	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAATGTGATTTCAG	3546	False	NA	-114	True	AGTAAA	-20	NA	83234427	83184027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83232747_83232825_83234281
ES.12444.16	chr15	-	4742	14	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	19	-49	intron_retention	FALSE	canonical	0	0	junction_13	15.6186052002849	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATATTGTTCAGCGCAG	3544	False	NA	NA	False	AATAAA	-30	NA	83234429	83184070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220920_83234281
ES.12444.17	chr15	-	2465	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	22	132	22	-50	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATATTGTTCAGCGCA	3547	False	NA	NA	False	AATAAA	-29	NA	83234426	83184071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.18	chr15	-	4667	15	Fusion	ENSMUSG00000054277.9_ENSMUSG00000075511.10	novel	2461	16	NA	NA	14	-50	intron_retention	FALSE	canonical	0	0	junction_14	17.2289504814971	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATATTGTTCAGCGCA	264	False	NA	NA	False	AATAAA	-29	NA	83251464	83184071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83251190
ES.12444.19	chr15	-	6040	13	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	-22	-2902	intron_retention	FALSE	canonical	0	0	junction_1	16.7804449682758	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGAGCTCTTTGAAGGG	3576	False	NA	NA	False	NA	NA	NA	83234397	83189677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83191173_83192186_83192378_83194450_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.2	chr15	-	4324	8	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.567275396514	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	3546	False	NA	-26	True	AATATA	-16	NA	83234427	83183939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83186997_83212253_83212879_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.20	chr15	-	2920	14	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	20	-2902	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	9.68375691191152	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGAGCTCTTTGAAGGG	3545	False	NA	NA	False	NA	NA	NA	83234428	83189677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.21	chr15	-	7896	1	NIC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	-6306	-2902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGAGCTCTTTGAAGGG	NA	False	NA	NA	False	NA	NA	NA	83197573	83189677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83189700_83197600
ES.12444.22	chr15	-	1776	14	NNC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	5	-4061	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	9.68375691191152	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGGCTAGTTGGCCT	3530	False	NA	NA	False	NA	NA	NA	83234443	83190836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.23	chr15	-	1639	14	NNC	ENSMUSG00000054277.9	novel	2461	16	NA	NA	31	-4169	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	13.5524403357201	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGGAAGTCATGACATTT	3556	False	NA	NA	False	NA	NA	NA	83234417	83190944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.24	chr15	-	2459	13	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	-53	7192	20	-4438	5prime_fragment	FALSE	canonical	3	13	junction_2	14.9499163877261	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTCTTGGAGTCTGAC	3545	False	NA	NA	False	NA	NA	NA	83234428	83191213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.25	chr15	-	178	1	Intergenic	novelGene_10410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	83210640	83210462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83210500_83210600
ES.12444.26	chr15	-	2043	1	NIC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	19	-17597	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATTATTGTCCAGCTG	3544	False	NA	NA	False	NA	NA	NA	83234429	83232386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83232400_83234400
ES.12444.27	chr15	-	6217	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	-32	-3915	-27	202	multi-exon	FALSE	canonical	3	13	junction_3	6.97614984548545	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	218	False	NA	NA	False	AATAAA	-20	NA	83251510	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
ES.12444.28	chr15	-	7414	4	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	6	202	intron_retention	FALSE	canonical	1	2	junction_1	21.249836600679	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	256	False	NA	NA	False	AATAAA	-20	NA	83251472	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83243152_83246788_83248130_83249229_83249715_83251190
ES.12444.29	chr15	-	6124	3	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	-40	202	intron_retention	FALSE	canonical	3	28	junction_1	13	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	205	False	NA	NA	False	AATAAA	-20	NA	83251523	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83249229_83249715_83251190
ES.12444.3	chr15	-	3602	2	NIC	ENSMUSG00000054277.9	novel	1186	3	NA	NA	-15	0	intron_retention	FALSE	canonical	2	5	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTTGCCTGTGTTGTCA	NA	False	NA	-26	True	AATATA	-16	NA	83189557	83183939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83187426_83189441
ES.12444.30	chr15	-	6086	5	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-1	202	intron_retention	FALSE	canonical	0	0	junction_1	19.4422220952236	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	249	False	NA	NA	False	AATAAA	-20	NA	83251479	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240052_83240154_83243152_83248020_83248130_83249229_83249715_83251190
ES.12444.31	chr15	-	5773	4	NNC	ENSMUSG00000075511.10	novel	1260	4	NA	NA	-2	202	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	21.2289111041209	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	248	False	NA	NA	False	AATAAA	-20	NA	83251480	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83242716_83243023_83243152_83249229_83249715_83251190
ES.12444.32	chr15	-	3479	7	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-3	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9707377001763	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	242	False	NA	NA	False	AATAAA	-20	NA	83251486	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240049_83240154_83240289_83242114_83242239_83243023_83243152_83248020_83248130_83249229_83249715_83251190
ES.12444.34	chr15	-	4136	5	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	11	202	intron_retention	FALSE	canonical	0	0	junction_1	21.4053147605916	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	261	False	NA	NA	False	AATAAA	-20	NA	83251467	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240049_83240154_83240289_83242114_83243152_83249229_83249715_83251190
ES.12444.35	chr15	-	6250	5	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	202	intron_retention	FALSE	canonical	1	1	junction_2	21.9587681803875	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	248	False	NA	NA	False	AATAAA	-20	NA	83251480	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83243152_83246788_83246849_83248020_83248130_83249229_83249715_83251190
ES.12444.36	chr15	-	4126	5	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-1	202	intron_retention	FALSE	canonical	1	1	junction_1	19.1098796437864	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	249	False	NA	NA	False	AATAAA	-20	NA	83251479	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240052_83242114_83243152_83248020_83248130_83249229_83249715_83251190
ES.12444.37	chr15	-	4060	4	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-42	202	intron_retention	FALSE	canonical	2	3	junction_1	20.8219969156552	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	203	False	NA	NA	False	AATAAA	-20	NA	83251525	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240049_83242114_83243152_83249229_83249715_83251190
ES.12444.38	chr15	-	3521	3	NNC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	7	202	intron_retention	FALSE	canonical	2	3	junction_1	2	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	257	False	NA	NA	False	AATAAA	-20	NA	83251471	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240049_83242114_83243152_83251190
ES.12444.4	chr15	-	2620	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	-2	1	-2	0	multi-exon	FALSE	canonical	3	20	junction_9	11.3927852413515	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	3523	False	NA	-27	True	AATATA	-15	NA	83234450	83183940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.40	chr15	-	3229	5	NNC	ENSMUSG00000075511.10	novel	1260	4	NA	NA	-2	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.8102613464397	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAGTAAGCTCAC	248	False	NA	NA	False	AATAAA	-20	NA	83251480	83237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240052_83242118_83242239_83243023_83243152_83249229_83249715_83251190
ES.12444.42	chr15	-	5589	2	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-2	195	intron_retention	FALSE	canonical	3	7	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACTGTTGTGAAGTA	248	False	NA	NA	False	AATAAA	-13	NA	83251480	83237852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83251190
ES.12444.43	chr15	-	3036	5	NNC	ENSMUSG00000075511.10	novel	1260	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	21.1068709192054	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCAAATGTTTGTCACA	242	False	NA	2	True	NA	NA	NA	83251486	83238045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83240049_83242114_83242239_83243023_83243152_83249229_83249715_83251190
ES.12444.44	chr15	-	6042	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-51	0	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTCAAATGTTTGTCA	194	False	NA	0	True	NA	NA	NA	83251534	83238047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
ES.12444.45	chr15	-	5909	3	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	-27	0	intron_retention	FALSE	canonical	3	28	junction_1	13	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTCAAATGTTTGTCA	218	False	NA	0	True	NA	NA	NA	83251510	83238047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83249229_83249715_83251190
ES.12444.47	chr15	-	11933	2	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	19	-3	intron_retention	FALSE	canonical	3	54	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGTCTCAAATGTTTG	269	False	NA	-3	True	NA	NA	NA	83251459	83238050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83249715_83251190
ES.12444.49	chr15	-	2252	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-55	2	intron_retention	FALSE	canonical	3	28	junction_1	13	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGCTTAAGTCTCTGA	190	False	NA	NA	False	AATAAA	-22	NA	83251538	83241732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83249229_83249715_83251190
ES.12444.5	chr15	-	5310	1	NIC	ENSMUSG00000054277.9	novel	2619	16	NA	NA	292	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTTGCCTGTGTTGTC	NA	False	NA	-27	True	AATATA	-15	NA	83189250	83183940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83183900_83189200
ES.12444.50	chr15	-	2297	4	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	20	junction_1	14.2672897060218	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGTCCAGCTTAAGTC	249	False	NA	NA	False	AATAAA	-17	NA	83251479	83241737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83243152_83248020_83248130_83249229_83249715_83251190
ES.12444.51	chr15	-	1879	4	NNC	ENSMUSG00000075511.10	novel	1260	4	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	21.2289111041209	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACAGTCCAGCTTAAGT	249	False	NA	NA	False	AATAAA	-16	NA	83251479	83241738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83242716_83243023_83243152_83249229_83249715_83251190
ES.12444.7	chr15	-	3494	17	NNC	ENSMUSG00000054277.9	novel	2461	16	NA	NA	-22	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	20.465577044149	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGACGGTTGCCTGTGTT	3576	False	NA	-30	True	AATATA	-12	NA	83234397	83183943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83211948_83212879_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ES.12444.8	chr15	-	2692	16	Fusion	ENSMUSG00000054277.9_ENSMUSG00000075511.10	novel	2619	16	NA	NA	-23	3	multi-exon	FALSE	canonical	0	0	junction_15	15.1120261160883	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTCAGATGACTATT	222	False	NA	-105	True	AGTAAA	-29	NA	83251506	83184018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83251190
ES.12444.9	chr15	-	2800	17	Fusion	ENSMUSG00000054277.9_ENSMUSG00000075511.10	novel	2461	16	NA	NA	-2	3	multi-exon	FALSE	canonical	0	0	junction_12	20.9314356889345	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTCAGATGACTATT	248	False	NA	-105	True	AGTAAA	-29	NA	83251480	83184018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208355_83211805_83211866_83214719_83214808_83216886_83216971_83218665_83218811_83220854_83220928_83227222_83227342_83242114_83242239_83251190
ES.12445.1	chr15	-	172	1	Intergenic	novelGene_10411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	83253262	83253090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83253100_83253300
ES.12446.1	chr15	+	864	2	Antisense	novelGene_ENSMUSG00000016664.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	83300057	83301119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_83300179_83300376
ES.12447.1	chr15	+	5658	1	Intergenic	novelGene_10412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7278	False	NA	NA	False	NA	NA	NA	83323871	83329529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83323900_83329500
ES.12448.1	chr15	-	4362	7	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	44187	-1896	-26	1385	3prime_fragment	FALSE	canonical	3	507	junction_5	50.5656888501372	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGCCTCCCAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	83272829	83258422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715
ES.12448.11	chr15	-	3278	12	NIC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	37	junction_10	226.521303250812	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	7104	False	NA	-2	True	AATAAA	-25	NA	83348810	83260324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
ES.12448.12	chr15	-	6353	11	NIC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	37	junction_9	234.491023282342	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	7132	False	NA	-2	True	AATAAA	-25	NA	83348782	83260324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
ES.12448.13	chr15	-	3021	10	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	197.857973753341	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCCTTGCATCCAC	7103	False	NA	-2	True	AATAAA	-25	NA	83348811	83260324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276847_83348673
ES.12448.14	chr15	-	3237	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-58	7	-49	-3	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTTGCCTTGCATCCA	NA	False	NA	-3	True	AATAAA	-24	NA	83317074	83260325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ES.12448.15	chr15	-	2956	10	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	9	-4	intron_retention	FALSE	canonical	0	0	junction_3	198.282502045148	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTTTGCCTTGCATCC	7116	False	NA	-4	True	AATAAA	-23	NA	83348798	83260326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83263990_83269256_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.18	chr15	-	3029	10	NIC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	3	-13	intron_retention	FALSE	canonical	2	10	junction_9	194.819638019438	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGACAGTCCCTTTGC	7110	False	NA	-13	True	AATAAA	-14	NA	83348804	83260335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83348659
ES.12448.19	chr15	-	3035	12	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	3	-13	intron_retention	FALSE	non_canonical	0	0	junction_1	181.549073574344	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGACAGTCCCTTTGC	7110	False	NA	-13	True	AATAAA	-14	NA	83348804	83260335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261109_83261235_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.2	chr15	-	3163	11	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	0	1384	intron_retention	FALSE	canonical	2	6	junction_1	186.09731325304	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAAGCCTCCCAAGTGC	7107	False	NA	NA	False	NA	NA	NA	83348807	83258423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83260018_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.21	chr15	-	3374	12	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	245	-14	intron_retention	FALSE	canonical	0	0	junction_10	240.698398433111	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	7406	False	NA	-14	True	AATAAA	-13	NA	83348508	83260336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83286499_83286754_83348404
ES.12448.24	chr15	-	2870	9	NIC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	-3	-14	intron_retention	FALSE	canonical	0	0	junction_4	206.348612789134	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	7104	False	NA	-14	True	AATAAA	-13	NA	83348810	83260336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.26	chr15	-	3300	13	NNC	ENSMUSG00000016664.17	novel	3103	11	NA	NA	-15	-14	intron_retention	FALSE	non_canonical	0	0	junction_10	268.865001234614	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	NA	False	NA	-14	True	AATAAA	-13	NA	83317040	83260336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83313633_83313702_83314089_83314218_83316952
ES.12448.27	chr15	-	3316	12	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	96	-14	intron_retention	FALSE	canonical	0	0	junction_10	240.698398433111	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGACAGTCCCTTTG	7257	False	NA	-14	True	AATAAA	-13	NA	83348657	83260336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348131_83348176_83348401
ES.12448.28	chr15	-	2252	6	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	3	-15	intron_retention	FALSE	non_canonical	0	0	junction_3	241.099481542371	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTGACAGTCCCTTT	7110	False	NA	-15	True	AATAAA	-12	NA	83348804	83260337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83263957_83276747_83276859_83286067_83286201_83348659
ES.12448.29	chr15	-	3184	11	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	-3	-15	intron_retention	FALSE	canonical	0	0	junction_3	189.960101073883	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTGACAGTCCCTTT	7104	False	NA	-15	True	AATAAA	-12	NA	83348810	83260337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264026_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.3	chr15	-	3745	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	-4	-48	-4	48	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCTTTGTGTGTCCTC	7103	False	NA	NA	False	NA	NA	NA	83348811	83259759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.30	chr15	-	3239	12	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	2	-15	intron_retention	FALSE	canonical	0	0	junction_10	240.698398433111	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTGACAGTCCCTTT	7109	False	NA	-15	True	AATAAA	-12	NA	83348805	83260337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83330486_83330565_83348659
ES.12448.31	chr15	-	3046	11	NNC	ENSMUSG00000016664.17	novel	3103	11	NA	NA	7	-16	intron_retention	FALSE	non_canonical	0	0	junction_9	247.033115189037	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGACAGTCCCTT	NA	False	NA	-16	True	AATAAA	-11	NA	83317009	83260338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276846_83286067_83286189_83316952
ES.12448.32	chr15	-	3083	11	NNC	ENSMUSG00000016664.17	novel	3103	11	NA	NA	-8	-16	intron_retention	FALSE	canonical	2	6	junction_10	188.284253191816	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGACAGTCCCTT	NA	False	NA	-16	True	AATAAA	-11	NA	83317033	83260338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286189_83316952
ES.12448.33	chr15	-	3216	11	NNC	ENSMUSG00000016664.17	novel	3186	11	NA	NA	-23	-16	intron_retention	FALSE	canonical	0	0	junction_3	239.074068020771	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGACAGTCCCTT	NA	False	NA	-16	True	AATAAA	-11	NA	83317048	83260338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264026_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ES.12448.34	chr15	-	2175	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-34	1045	-25	175	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCAATGTACAGCTATA	NA	False	NA	NA	False	AGTAAA	-20	NA	83317050	83261363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ES.12448.35	chr15	-	1920	12	NIC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-1	98	intron_retention	FALSE	canonical	3	37	junction_10	226.521303250812	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTGGCTTCCTGGTG	7106	False	NA	NA	False	NA	NA	NA	83348808	83261680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83337067_83337167_83348659
ES.12448.36	chr15	-	4320	2	ISM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	-10	21641	-10	-7261	5prime_fragment	FALSE	canonical	3	32	junction_1	0	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGGAAAGTGGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	83317035	83281963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83286201_83316952
ES.12448.4	chr15	-	3618	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	-1	-514	-1	-1	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGTGTCACTTTGCTCA	NA	False	NA	NA	False	AGTAAA	-18	NA	83317026	83259808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
ES.12448.5	chr15	-	1819	12	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	25	junction_1	174.707973581797	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGTGTCACTTTGCTC	7104	False	NA	NA	False	AGTAAA	-17	NA	83348810	83259809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83260018_83261892_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.6	chr15	-	3733	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	-39	-508	-30	-3	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGTGTCACTTTGCT	NA	False	NA	NA	False	AGTAAA	-16	NA	83317055	83259810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ES.12448.7	chr15	-	3161	11	NNC	ENSMUSG00000016664.17	novel	3083	12	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	184.540076948071	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7110	False	NA	0	True	AATAAA	-27	NA	83348804	83260322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274852_83276707_83276859_83286067_83286201_83348659
ES.12448.8	chr15	-	3232	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	-54	515	-54	0	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7053	False	NA	0	True	AATAAA	-27	NA	83348861	83260322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ES.12448.9	chr15	-	3160	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	-57	0	-57	0	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	NA	False	NA	0	True	AATAAA	-27	NA	83317082	83260322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
ES.12449.1	chr15	+	178	1	Intergenic	novelGene_10413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGCAGCTGGGATG	NA	False	NA	NA	False	NA	NA	NA	83375839	83376017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_83375800_83376000
ES.1245.1	chr1	-	164	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATTAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	127841692	127841528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_127841500_127841700
ES.12450.1	chr15	+	1619	1	Antisense	novelGene_ENSMUSG00000022442.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTAAAGCCCTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	83386281	83387900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_83386300_83387900
ES.12451.1	chr15	-	2079	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	-5	-14	-5	14	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGTGTGTGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	83395099	83367955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ES.12451.2	chr15	-	1840	9	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	6657	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	20.8851023459307	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGACTTTATCTTATT	5628	False	NA	NA	False	NA	NA	NA	83388337	83367972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83388068
ES.12451.3	chr15	-	1711	9	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	6650	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.4454153300811	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGACTTTATCTTATT	5621	False	NA	NA	False	NA	NA	NA	83388344	83367972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83388204
ES.12451.4	chr15	-	1829	11	NIC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	22.3821357336605	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGACTTTATCTTATT	NA	False	NA	NA	False	NA	NA	NA	83395075	83367972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ES.12451.5	chr15	-	2187	13	NIC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	26.9859788696937	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGACTTTATCTTATT	NA	False	NA	NA	False	NA	NA	NA	83395090	83367972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393863_83393998_83394934
ES.12451.6	chr15	-	5261	12	NIC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	-6	-215	intron_retention	FALSE	canonical	1	1	junction_11	21.4445277074372	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTCCACATCACTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	83395100	83368243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83393998_83394934
ES.12451.7	chr15	-	2047	10	ISM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	22	8056	3	49	5prime_fragment	FALSE	canonical	3	63	junction_9	7.56372107783	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGATTTA	NA	False	NA	NA	False	NA	NA	NA	83395072	83376025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ES.12452.1	chr15	+	943	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	-4	3	-4	-1	multi-exon	FALSE	canonical	3	12	junction_1	7.58287544405155	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCCTTAGGTCGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	83411058	83428832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
ES.12453.1	chr15	-	1915	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	2	0	2	0	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	8053	False	NA	0	True	AATAAA	-23	NA	83439934	83430997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
ES.12453.10	chr15	-	1536	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	32	349	-18	240	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTGTGGTGGCCTT	8083	False	NA	NA	False	NA	NA	NA	83439904	83431346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
ES.12453.2	chr15	-	6278	2	ISM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	1486	0	1116	0	intron_retention	FALSE	canonical	3	226	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	9537	False	NA	0	True	AATAAA	-23	NA	83438450	83430997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83432144_83433318
ES.12453.3	chr15	-	1942	5	NNC	ENSMUSG00000048755.10	novel	1917	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.9358509630263	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGCTCTCTCTCTCTG	8102	False	NA	-2	True	AATAAA	-21	NA	83439885	83430999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83432144_83433318_83433537_83436734_83436823_83437570_83437649_83439471
ES.12453.4	chr15	-	3728	2	ISM	ENSMUSG00000048755.10	ENSMUST00000230094.2	326	3	10062	-2497	-838	-3	3prime_fragment	FALSE	canonical	3	138	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGGCTCTCTCTCTCT	10003	False	NA	-3	True	AATAAA	-20	NA	83437926	83431000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83433537_83436734
ES.12453.5	chr15	-	3413	1	NIC	ENSMUSG00000048755.10	novel	1917	4	NA	NA	2675	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGGCTCTCTCTCTCT	NA	False	NA	-3	True	AATAAA	-20	NA	83434413	83431000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83431000_83434400
ES.12453.6	chr15	-	4570	3	FSM	ENSMUSG00000048755.10	ENSMUST00000229724.2	688	3	-2855	-1027	-7	-3	multi-exon	FALSE	canonical	3	138	junction_2	44	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGGCTCTCTCTCTCT	8044	False	NA	-3	True	AATAAA	-20	NA	83439943	83431000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83432144_83433318_83433537_83436734
ES.12453.8	chr15	-	2064	4	NNC	ENSMUSG00000048755.10	novel	1917	4	NA	NA	-24	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.355260785461	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCAGCTGGCTCTCT	8077	False	NA	-9	True	AATAAA	-14	NA	83439910	83431006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83432144_83433318_83433537_83436552_83436823_83439471
ES.12453.9	chr15	-	1683	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	33	201	-17	-201	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGTGGAGTGGGAACC	8084	False	NA	NA	False	AAGAAA	-15	NA	83439903	83431198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
ES.12454.1	chr15	-	231	1	Intergenic	novelGene_10414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATCAATCAATAAATCAAT	5821	False	NA	NA	False	NA	NA	NA	83442166	83441935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83441900_83442200
ES.12455.1	chr15	+	861	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	-26	2	-26	-2	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTCTGTACTTAGTG	NA	False	NA	19	True	AATAAA	-19	NA	83447766	83458402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ES.12455.2	chr15	+	1278	3	ISM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	2	988	2	890	5prime_fragment	FALSE	canonical	3	179	junction_1	61	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCAGTTCGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	83447794	83457416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_83447846_83455585_83455797_83456400
ES.12455.3	chr15	+	1241	4	NIC	ENSMUSG00000041736.8	novel	837	4	NA	NA	32	-8	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	137.297730012796	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAACAGACTCTGTAC	NA	False	NA	13	True	AATAAA	-13	NA	83447824	83458396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_83448290_83455585_83455797_83456400_83456540_83457970
ES.12455.4	chr15	+	3713	1	NIC	ENSMUSG00000041736.8	novel	837	4	NA	NA	5629	891	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTCGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	83453704	83457417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_83453700_83457400
ES.12455.5	chr15	+	1062	5	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6037	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	145.585885304861	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAACAGACTCTGTAC	NA	False	NA	13	True	AATAAA	-13	NA	83454112	83458396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_83454247_83455231_83455384_83455585_83455797_83456400_83456540_83457970
ES.12455.6	chr15	+	913	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6039	-3	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGACTCTGTACTTAGT	NA	False	NA	18	True	AATAAA	-18	NA	83454114	83458401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
ES.12456.1	chr15	+	3222	10	Antisense	novelGene_ENSMUSG00000016757.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAAGAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	83461206	83473356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_83461249_83461946_83462086_83462834_83462899_83464261_83464353_83464696_83466447_83466552_83466666_83468858_83468933_83471050_83471186_83471274_83471437_83472704
ES.12457.1	chr15	-	4192	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	41	-459	41	459	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGCTGGTGACAGCAT	4712	False	NA	NA	False	ATTAAA	-21	NA	83479317	83458831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.10	chr15	-	4067	12	NIC	ENSMUSG00000016757.12	novel	3774	14	NA	NA	41	-524	intron_retention	FALSE	canonical	1	2	junction_8	76.6966763640333	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTCTTTTCTCTTTGG	4712	False	NA	-2	True	AGTAAA	-16	NA	83479317	83459843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.12	chr15	-	12656	9	NIC	ENSMUSG00000016757.12	novel	3575	13	NA	NA	119	-526	intron_retention	FALSE	canonical	3	239	junction_6	13.7061801753807	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGTCTTTTCTCTTT	4790	False	NA	-4	True	AGTAAA	-14	NA	83479239	83459845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83466441_83466546_83468934_83471051_83471186_83471274_83471435_83472703
ES.12457.13	chr15	-	3101	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-47	720	-47	-691	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGACATGGTTCTTCC	4624	False	NA	-2	True	NA	NA	NA	83479405	83460010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.16	chr15	-	2867	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-43	950	-43	-921	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGTTTTCCTTCAA	4628	False	NA	NA	False	NA	NA	NA	83479401	83460240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.17	chr15	-	2312	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	26	1436	26	-1407	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAGGGTTCGACGAGG	4697	False	NA	NA	False	AAGAAA	-9	NA	83479332	83460726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.18	chr15	-	2231	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-44	1587	-44	-1558	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGAGTGGTGTCCCAA	4627	False	NA	53	True	NA	NA	NA	83479402	83460877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.19	chr15	-	3122	13	NIC	ENSMUSG00000016757.12	novel	3774	14	NA	NA	33	-1611	intron_retention	FALSE	canonical	3	239	junction_8	13.8771895169335	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGTTCCTGCTCCATA	4704	False	NA	0	True	NA	NA	NA	83479325	83460930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.22	chr15	-	183	1	Intergenic	novelGene_10415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAACCAAAAT	1788	False	NA	NA	False	NA	NA	NA	83472308	83472125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83472100_83472300
ES.12457.3	chr15	-	3792	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-18	0	-18	0	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGGTACTTCACATG	4653	False	NA	NA	False	AATATA	-19	NA	83479376	83459290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.6	chr15	-	3270	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	-47	551	-47	-522	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTTCTCTTTGGGG	4624	False	NA	0	True	AGTAAA	-18	NA	83479405	83459841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.7	chr15	-	3346	14	NNC	ENSMUSG00000016757.12	novel	3774	14	NA	NA	35	-523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	72.2282706211569	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4706	False	NA	-1	True	AGTAAA	-17	NA	83479323	83459842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464510_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12457.8	chr15	-	3185	14	NNC	ENSMUSG00000016757.12	novel	3774	14	NA	NA	22	-524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	71.7093079876734	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTCTTTTCTCTTTGG	4693	False	NA	-2	True	AGTAAA	-16	NA	83479336	83459843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465882_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ES.12458.1	chr15	-	3919	22	FSM	ENSMUSG00000016763.16	ENSMUST00000171496.9	2989	22	-105	-825	-10	8	multi-exon	FALSE	canonical	0	0	junction_1	0.699854212223765	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTCTGTGTGAGGGAGA	NA	False	NA	NA	False	ATTAAA	-20	NA	83609232	83490698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83491679_83492418_83492499_83492924_83493078_83494354_83494553_83496616_83496779_83497638_83497807_83499070_83499233_83500811_83501016_83502752_83502891_83504256_83504374_83505229_83505335_83505612_83505733_83512152_83512276_83513584_83513702_83518871_83518995_83522904_83523022_83538369_83538487_83543226_83543353_83561106_83561242_83587618_83587748_83606050_83606183_83609019
ES.12458.2	chr15	-	2745	13	NNC	ENSMUSG00000016763.16	novel	5161	20	NA	NA	-9768	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.645497224367903	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCTCTGTGTGAGGGA	3175	False	NA	NA	False	ATTAAA	-18	NA	83507708	83490700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_83491679_83492418_83492499_83492924_83493078_83494354_83494553_83496616_83496779_83497638_83497807_83499070_83499233_83500811_83501016_83502752_83502891_83504256_83504374_83505229_83505335_83505612_83505733_83507548
ES.12458.3	chr15	-	3873	23	FSM	ENSMUSG00000016763.16	ENSMUST00000016907.8	3991	23	-1	119	-1	6	multi-exon	FALSE	canonical	0	0	junction_1	0.710022697809696	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTATGTGGGCGGGT	NA	False	NA	NA	False	NA	NA	NA	83609223	83490825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83491679_83492418_83492499_83492924_83493078_83494354_83494553_83496616_83496779_83497638_83497807_83499070_83499233_83500811_83501016_83502752_83502891_83504256_83504374_83505229_83505335_83505612_83505733_83512152_83512276_83513584_83513702_83518871_83518995_83522904_83523022_83535855_83535946_83538369_83538487_83543226_83543353_83561106_83561242_83587618_83587748_83606050_83606183_83609019
ES.12458.4	chr15	-	182	1	Intergenic	novelGene_10416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	83520235	83520053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83520100_83520200
ES.12458.5	chr15	-	3177	5	ISM	ENSMUSG00000016763.16	ENSMUST00000171496.9	2989	22	-111	49267	-16	0	5prime_fragment	FALSE	canonical	0	0	junction_3	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83609238	83540790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_83543353_83561106_83561242_83587618_83587748_83606050_83606183_83609019
ES.12459.1	chr15	-	194	1	Intergenic	novelGene_10417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCACTTCTCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	83897533	83897339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83897300_83897500
ES.1246.1	chr1	-	4250	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-2	40075	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.2249731644421	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAGGAGACCCAGGAAA	NA	False	NA	NA	False	NA	NA	NA	128030202	127841845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127841885_127881920_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.10	chr1	-	3895	18	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.8572996952647	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030175	127881920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.11	chr1	-	4162	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	65.4682365731658	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030800	127881920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985940_127986065_128019579_128019748_128030743
ES.1246.13	chr1	-	4041	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	58.5170856030888	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAATTATGGGTACG	NA	False	NA	-6	True	AATAAA	-21	NA	128030787	127881921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128030743
ES.1246.14	chr1	-	4146	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.3100683739811	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAATTATGGGTACG	NA	False	NA	-6	True	AATAAA	-21	NA	128030210	127881921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924638_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.15	chr1	-	3524	17	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	62.1187119554165	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAATTATGGGTAC	NA	False	NA	-7	True	AATAAA	-20	NA	128030785	127881922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_128019579_128019748_128030743
ES.1246.16	chr1	-	5140	2	ISM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	141666	2	12162	-2	intron_retention	FALSE	canonical	3	189	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAATTATGGGTAC	8433	False	NA	-7	True	AATAAA	-20	NA	127888533	127881922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_127882803_127884273
ES.1246.17	chr1	-	4984	10	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-4993	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	74.9752222445341	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAATTATGGGTAC	NA	False	NA	-7	True	AATAAA	-20	NA	127905688	127881922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127890157_127891280_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875
ES.1246.18	chr1	-	4406	22	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	70.4452312952757	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAATTATGGGTAC	NA	False	NA	-7	True	AATAAA	-20	NA	128030195	127881922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915039_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985940_127986065_128019579_128019748_128029989
ES.1246.19	chr1	-	4211	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	58.8308999781898	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAATTATGGGTAC	NA	False	NA	-7	True	AATAAA	-20	NA	128030195	127881922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945476_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.20	chr1	-	5358	21	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	64.9363342051274	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAATTATGGGTA	NA	False	NA	-8	True	AATAAA	-19	NA	128030767	127881923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985940_127986065_128019579_128019748_128029511
ES.1246.21	chr1	-	6367	19	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	60.3331542866179	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAATTATGGGTA	NA	False	NA	-8	True	AATAAA	-19	NA	128030198	127881923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887633_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.22	chr1	-	4092	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	58.7852564100144	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAATTATGGGTA	NA	False	NA	-8	True	AATAAA	-19	NA	128030801	127881923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128030704
ES.1246.24	chr1	-	4210	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.9451852218358	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAATTATGGGTA	NA	False	NA	-8	True	AATAAA	-19	NA	128030195	127881923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019553_128019748_128029989
ES.1246.25	chr1	-	4280	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.2249731644421	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030189	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128015232_128015339_128019579_128019748_128029989
ES.1246.26	chr1	-	3403	16	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	6	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	47.022264230185	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030185	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127985718_127985738_128019579_128019748_128029989
ES.1246.27	chr1	-	4237	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	68.8058008248346	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030767	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924641_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128030452
ES.1246.28	chr1	-	5280	20	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	57.8563030322023	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030800	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.29	chr1	-	4665	9	ISM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	123703	7	-5801	-7	3prime_fragment	FALSE	canonical	3	115	junction_3	23.8851418249924	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	127906496	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875
ES.1246.3	chr1	-	4356	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	66.2966628119395	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGTACGTGTATCCCT	NA	False	NA	3	True	AATAAA	-30	NA	128030198	127881912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127898116_127898258_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.30	chr1	-	2996	6	ISM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	136056	7	6552	-7	3prime_fragment	FALSE	canonical	3	115	junction_3	29.6283647878178	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	2823	False	NA	-12	True	AATAAA	-15	NA	127894143	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799
ES.1246.33	chr1	-	4183	20	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	45.8399600682436	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030198	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019579_128019748_128029989
ES.1246.34	chr1	-	4163	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.6585389884652	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030188	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895702_127900706_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019561_128019748_128029989
ES.1246.35	chr1	-	4022	19	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	61.3007159646425	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030200	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.37	chr1	-	3405	15	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	48.2836538021906	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030189	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_128019562_128019748_128029989
ES.1246.39	chr1	-	4138	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.3205760923007	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030189	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964314_127968554_127968734_128019562_128019748_128029989
ES.1246.4	chr1	-	4817	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-16	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.9451852218358	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGTACGTGTATCCCT	NA	False	NA	3	True	AATAAA	-30	NA	128030800	127881912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.40	chr1	-	4294	22	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	45.2627000756759	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	False	NA	-12	True	AATAAA	-15	NA	128030767	127881927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989_128030228_128030704
ES.1246.41	chr1	-	3966	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	58.5170856030888	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATTTTTAAATTAT	NA	False	NA	-13	True	AATAAA	-14	NA	128030799	127881928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968642_128019550_128019748_128030743
ES.1246.42	chr1	-	4346	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-232	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.9451852218358	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCTCCTGGTCCTCGT	NA	False	NA	1	True	TATAAA	-24	NA	128030432	127882015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.44	chr1	-	4040	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	-97	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	58.4927487988884	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTCTCCTGGTCCTC	NA	False	NA	-1	True	TATAAA	-22	NA	128030198	127882017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964314_127968554_127968734_128019579_128019748_128029989
ES.1246.46	chr1	-	4091	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	59.587966585317	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTCTCCTGGTCCTC	NA	False	NA	-1	True	TATAAA	-22	NA	128030189	127882017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924696_127927073_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.47	chr1	-	4749	20	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	-232	-98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.3719982602898	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGTCTCCTGGTCCT	NA	False	NA	-2	True	TATAAA	-21	NA	128030432	127882018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924638_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.48	chr1	-	5104	21	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	192	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	69.9749240799874	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030546	127882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127937746_127937917_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.49	chr1	-	4057	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	1	-99	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	45.7869795902722	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030198	127882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964314_127968554_127968734_127985718_127985738_128019579_128019748_128029989
ES.1246.5	chr1	-	4050	19	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-12	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	48.1551312599879	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGTACGTGTATCCCT	NA	False	NA	3	True	AATAAA	-30	NA	128030212	127881912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_128019562_128019748_128029989
ES.1246.51	chr1	-	4005	19	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	10	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	59.1987914874979	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030181	127882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.52	chr1	-	5083	20	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	29	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	67.6035780659058	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030709	127882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924696_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.53	chr1	-	3290	16	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	20	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	63.9152216264291	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTTGTCTCCTGGTCC	NA	False	NA	-3	True	TATAAA	-20	NA	128030764	127882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_128019562_128019748_128030704
ES.1246.54	chr1	-	3897	19	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	18	-100	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	48.1846051435467	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATTTTGTCTCCTGGTC	NA	False	NA	-4	True	TATAAA	-19	NA	128030173	127882020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128029989
ES.1246.56	chr1	-	4246	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	3	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	66.2966628119395	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATTTTGTCTCCTGGTC	NA	False	NA	-4	True	TATAAA	-19	NA	128030196	127882020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127898116_127898258_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.57	chr1	-	4019	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-2	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.9451852218358	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATTTTGTCTCCTGGTC	NA	False	NA	-4	True	TATAAA	-19	NA	128030202	127882020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968642_128019562_128019748_128029989
ES.1246.59	chr1	-	3513	9	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-4727	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.9363140910246	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGATTTTGTCTCCTG	NA	False	NA	-7	True	TATAAA	-16	NA	127905422	127882023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887856_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875
ES.1246.6	chr1	-	4647	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.9451852218358	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGGGTACGTGTATC	NA	False	NA	0	True	AATAAA	-27	NA	128030725	127881915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968642_128019562_128019748_128029989
ES.1246.60	chr1	-	4196	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	5	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	57.0327975817424	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGATTTTGTCTCCTG	NA	False	NA	-7	True	TATAAA	-16	NA	128030186	127882023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985943_127986065_128019579_128019748_128029989
ES.1246.61	chr1	-	3995	20	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-2	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.9404171094667	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGATTTTGTCTCCTG	NA	False	NA	-7	True	TATAAA	-16	NA	128030786	127882023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887856_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128030704
ES.1246.62	chr1	-	3848	18	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	0	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	61.1738121594334	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGATTTTGTCTCCTG	NA	False	NA	-7	True	TATAAA	-16	NA	128030200	127882023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.63	chr1	-	4697	20	NIC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	-130	-103	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	57.010131771938	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGATTTTGTCTCCTG	NA	False	NA	-7	True	TATAAA	-16	NA	128030330	127882023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019579_128019748_128029511
ES.1246.64	chr1	-	3967	20	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	45	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	57.8563030322023	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGATTTTTGCTAAGCT	NA	False	NA	NA	False	AATATA	-15	NA	128030146	127882586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.65	chr1	-	5699	9	ISM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	122008	668	-7496	-182	3prime_fragment	FALSE	canonical	3	115	junction_3	23.8851418249924	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGATTTTTGCTAAG	NA	False	NA	NA	False	AATATA	-13	NA	127908191	127882588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875
ES.1246.66	chr1	-	3748	12	NNC	ENSMUSG00000036086.17	novel	4741	21	NA	NA	20	-10460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	70.6577129313864	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATTAGTATTCTCAC	NA	False	NA	NA	False	AATAAA	-23	NA	128030764	127903327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029511
ES.1246.67	chr1	-	2686	12	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	7	-10464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	57.39942695599	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGAAATATTAGTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	128030184	127903331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.68	chr1	-	3997	1	FSM	ENSMUSG00000104164.2	ENSMUST00000193744.2	5783	1	4969	-3183	4969	3183	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGCCTGCTCAGTATT	NA	False	NA	NA	False	AATAGA	-14	NA	127907455	127903458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_127903500_127907500
ES.1246.69	chr1	-	2139	13	NNC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	76.9665782444995	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATATGTGTGATTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	128030190	127914846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985940_127986065_128019579_128019748_128029989
ES.1246.70	chr1	-	1937	12	NNC	ENSMUSG00000036086.17	novel	1913	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	69.5979006047958	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATATGTGTGATTGG	NA	False	NA	NA	False	AATAAA	-13	NA	128030189	127914848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968642_128019562_128019748_128029989
ES.1246.71	chr1	-	2130	1	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	20111	13	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAACTCAGGTTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	127926319	127924189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127924200_127926300
ES.1246.72	chr1	-	9063	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAACATTTCAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	127942197	127933134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_127933100_127942200
ES.1246.73	chr1	-	3824	8	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-4	-8571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.0640965847522	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128030204	127933160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127935799_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.74	chr1	-	2336	8	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	2	-10044	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.0640965847522	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAAACAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	128030189	127934633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127935799_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.75	chr1	-	1499	8	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	17	-10866	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.0640965847522	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTCAGAAAGTATGAT	NA	False	NA	NA	False	AATATA	-17	NA	128030174	127935455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127935799_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_128019562_128019748_128029989
ES.1246.76	chr1	-	4758	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGTGATAAAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	127957720	127952962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_127953000_127957700
ES.1246.77	chr1	-	3163	3	ISM	ENSMUSG00000036086.17	ENSMUST00000112538.4	4741	21	567	100996	20	2190	5prime_fragment	FALSE	canonical	3	13	junction_2	83	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	128030171	127983402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_127985738_128019579_128019748_128029511
ES.1246.78	chr1	-	5389	1	NIC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	41400	2190	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	127988791	127983402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_127983400_127988800
ES.1246.79	chr1	-	2712	3	FSM	ENSMUSG00000036086.17	ENSMUST00000124876.2	515	3	-7	-2190	1	2190	multi-exon	FALSE	canonical	3	174	junction_2	2.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	128030198	127983402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_127985738_128019579_128019748_128029989
ES.1246.8	chr1	-	3886	18	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	61.6362810515731	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030195	127881920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127968554_127968734_128019562_128019748_128029989
ES.1246.80	chr1	-	2997	2	ISM	ENSMUSG00000036086.17	ENSMUST00000124876.2	515	3	-297	31657	250	-31657	5prime_fragment	FALSE	canonical	3	174	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGCCCATCTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	128030488	128017249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128019748_128029989
ES.1246.81	chr1	-	147	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATCCGGCCATTATATG	NA	False	NA	NA	False	NA	NA	NA	128018743	128018596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128018600_128018700
ES.1246.82	chr1	-	431	2	ISM	ENSMUSG00000036086.17	ENSMUST00000124876.2	515	3	2	33924	2	-33924	5prime_fragment	FALSE	canonical	3	174	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTGCTTAATTCAGGC	NA	False	NA	NA	False	ATTAAA	-21	NA	128030189	128019516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128019748_128029989
ES.1246.83	chr1	-	207	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAAATTTTTCTAGACA	NA	False	NA	NA	False	ACTAAA	-9	NA	128020648	128020441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128020400_128020600
ES.1246.9	chr1	-	4548	21	NNC	ENSMUSG00000036086.17	novel	4210	21	NA	NA	-232	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	57.0327975817424	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030432	127881920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985940_127986065_128019579_128019748_128029989
ES.12460.1	chr15	-	4858	6	NIC	ENSMUSG00000018865.10	novel	2383	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	68	junction_1	7.23878442834154	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989826	83960297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12460.2	chr15	-	2458	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-91	-1048	54	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989901	83960297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12460.4	chr15	-	2277	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	104	2	-41	-2	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTTTGTCTGTGT	NA	False	NA	-3	True	AATAAA	-15	NA	83989851	83960299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12460.5	chr15	-	3807	6	NIC	ENSMUSG00000018865.10	novel	1319	8	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	68	junction_1	7.23878442834154	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTGCATTTCCAG	NA	False	NA	NA	False	AATAAA	-13	NA	83989826	83961348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12460.6	chr15	-	1385	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	-69	3	-69	-3	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTGCATTTCCAG	NA	False	NA	NA	False	AATAAA	-13	NA	83989879	83961348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12460.7	chr15	-	2645	7	NIC	ENSMUSG00000018865.10	novel	1319	8	NA	NA	-43	-6	intron_retention	FALSE	canonical	3	63	junction_1	8.90068661521246	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATACAAGTGCATTTC	NA	False	NA	NA	False	AATAAA	-10	NA	83989853	83961351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_83961784_83962969_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ES.12461.1	chr15	-	143	1	Intergenic	novelGene_10418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGCAGGCTGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	83992135	83991992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_83992000_83992100
ES.12462.1	chr15	+	4379	9	NIC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-74	2283	intron_retention	TRUE	canonical	2	2	junction_8	13.9681557479862	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	10	True	AATAAA	-45	NA	84051963	84073720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84070603
ES.12462.10	chr15	+	2481	3	NNC	ENSMUSG00000041653.6	novel	303	3	NA	NA	-2660	2278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTCTCTGTCTC	NA	False	NA	5	True	AATAAA	-40	NA	84067554	84073715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84068124_84070177_84070283_84071908
ES.12462.2	chr15	+	3069	9	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-66	2286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.5425023637612	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGTCTCTTCTGCCT	NA	False	NA	13	True	AATAAA	-24	NA	84051971	84073723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071908
ES.12462.3	chr15	+	3144	10	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-27	2283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.9341498782421	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	10	True	AATAAA	-45	NA	84052010	84073720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84070603_84070721_84071908
ES.12462.4	chr15	+	2921	10	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	-19	2274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.3105263059115	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAAATGTATTCTCTG	NA	False	NA	1	True	AATAAA	-36	NA	84052018	84073711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071908_84073247_84073335
ES.12462.5	chr15	+	4635	8	FSM	ENSMUSG00000041653.6	ENSMUST00000045289.6	1313	8	-18	-3304	-18	2274	multi-exon	FALSE	canonical	3	25	junction_1	7.55658923167897	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAAATGTATTCTCTG	NA	False	NA	1	True	AATAAA	-36	NA	84052019	84073711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177
ES.12462.6	chr15	+	2733	10	NNC	ENSMUSG00000041653.6	novel	1313	8	NA	NA	41	2274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.3105263059115	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAAATGTATTCTCTG	NA	False	NA	1	True	AATAAA	-36	NA	84052078	84073711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071908_84073117_84073333
ES.12462.7	chr15	+	3412	9	NNC	ENSMUSG00000041653.6	novel	303	3	NA	NA	1232	2283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2688259064451	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCTGTCTCTTCTG	NA	False	NA	10	True	AATAAA	-45	NA	84053269	84073720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84053904_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071906
ES.12462.8	chr15	+	2832	9	NNC	ENSMUSG00000041653.6	novel	303	3	NA	NA	1795	2278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2688259064451	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTCTCTGTCTC	NA	False	NA	5	True	AATAAA	-40	NA	84053832	84073715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84053904_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177_84070283_84071918
ES.12462.9	chr15	+	151	1	Intergenic	novelGene_10419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAACAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	84057858	84058009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84057900_84058000
ES.12463.1	chr15	+	1766	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-37	2900	-37	-2900	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATGTGACAGTCTGAC	NA	False	NA	91	True	NA	NA	NA	84076404	84098568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.10	chr15	+	1730	16	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-7	-2964	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	633.858918757864	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGTCCTGGATGTGGT	NA	False	NA	27	True	AATAAA	-13	NA	84076434	84098504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076586_84076737_84076796_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.16	chr15	+	1656	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	4	-2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	483.618904611843	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076445	84098505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092096_84094684_84094832_84095237_84095380_84098326
ES.12463.17	chr15	+	5631	11	NIC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	6	-2964	intron_retention	FALSE	canonical	3	1706	junction_7	89.3691221843428	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGTCCTGGATGTGGT	NA	False	NA	27	True	AATAAA	-13	NA	84076447	84098504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684
ES.12463.20	chr15	+	4998	13	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	15	2969	15	-2969	intron_retention	FALSE	canonical	3	1573	junction_6	133.559885652675	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGCGGTGTCCTGGAT	NA	False	NA	22	True	AATAAA	-8	NA	84076456	84098499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684
ES.12463.22	chr15	+	1680	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	18	-2980	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	488.361358347004	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTAAACGCTCAGCG	NA	False	NA	11	True	NA	NA	NA	84076459	84098488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095429_84098326
ES.12463.24	chr15	+	3865	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	60	-914	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	488.74934104032	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATGTCAGTCTGCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	84076501	84100554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076796_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.25	chr15	+	1689	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	78	-2969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	489.244878379333	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGCGGTGTCCTGGAT	NA	False	NA	22	True	AATAAA	-8	NA	84076519	84098499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076586_84079837_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.26	chr15	+	3340	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	102	1187	102	-1187	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTCCTCTGAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	84076543	84100281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.28	chr15	+	1359	12	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	6280	2966	-1528	-2966	3prime_fragment	FALSE	canonical	3	1573	junction_3	145.624559730473	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGGTGTCCTGGATGTG	NA	False	NA	25	True	AATAAA	-11	NA	84082721	84098502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.4	chr15	+	1666	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-10	-2969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	489.353425971663	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGCGGTGTCCTGGAT	NA	False	NA	22	True	AATAAA	-8	NA	84076431	84098499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095382_84098332
ES.12463.5	chr15	+	2088	14	NIC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-9	-2963	intron_retention	FALSE	canonical	3	1573	junction_5	117.309936926823	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGTCCTGGATGTGGTC	NA	False	NA	28	True	AATAAA	-14	NA	84076432	84098505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.6	chr15	+	3403	12	NIC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-8	-2964	intron_retention	FALSE	canonical	3	1706	junction_6	103.003329802552	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGTCCTGGATGTGGT	NA	False	NA	27	True	AATAAA	-13	NA	84076433	84098504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.7	chr15	+	1524	14	NIC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-8	-2966	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	493.753382132076	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGGTGTCCTGGATGTG	NA	False	NA	25	True	AATAAA	-11	NA	84076433	84098502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84095237_84095380_84098326
ES.12463.8	chr15	+	1879	14	NIC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	-8	-2964	intron_retention	FALSE	canonical	3	1706	junction_8	120.981586940733	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGTCCTGGATGTGGT	NA	False	NA	27	True	AATAAA	-13	NA	84076433	84098504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12463.9	chr15	+	3735	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	-8	902	-8	-902	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTTACTCATTGATG	NA	False	NA	NA	False	AATAAA	-30	NA	84076433	84100566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ES.12464.1	chr15	+	3794	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	-10	0	-10	0	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGCTTTGATCAGACC	NA	False	NA	79	True	AATAAA	-16	NA	84116233	84199889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.2	chr15	+	1651	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	-7	2140	-7	-2140	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTAGACTCCTGAT	NA	False	NA	32	True	AGTAAA	-35	NA	84116236	84197749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.3	chr15	+	5784	4	ISM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	-7	27455	-7	-2201	5prime_fragment	FALSE	canonical	3	67	junction_3	5.43650214343336	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGCGCTGCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	84116236	84172434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962
ES.12464.4	chr15	+	2009	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	-7	1782	-7	-1782	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGCTGGCAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	84116236	84198107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.5	chr15	+	1355	12	NNC	ENSMUSG00000022438.7	novel	3784	13	NA	NA	5	-2417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.3099843822519	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTAAGGCCTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	84116248	84197472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84187595_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.6	chr15	+	1354	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	18	2412	-5	-2412	multi-exon	FALSE	canonical	3	64	junction_4	7.38052994182818	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCCTCACTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	84116261	84197477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.7	chr15	+	3763	12	NNC	ENSMUSG00000022438.7	novel	3784	13	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.3099843822519	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGTGCTTTGATCAGAC	NA	False	NA	78	True	AATAAA	-15	NA	84116263	84199888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179837_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.8	chr15	+	1573	12	NNC	ENSMUSG00000022438.7	novel	3784	13	NA	NA	33	-2155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.3099843822519	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCTGAGTCTCAGAAG	NA	False	NA	17	True	AGTAAA	-20	NA	84116299	84197734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179837_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ES.12464.9	chr15	+	212	1	Genic_Genomic	ENSMUSG00000022438.7	novel	NA	NA	NA	NA	2428	24	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGGGTGGTGAGGGGTA	NA	False	NA	NA	False	NA	NA	NA	84157919	84158131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_84157900_84158100
ES.12465.1	chr15	-	186	1	Intergenic	novelGene_10420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGGAGAAAAAAATACAGT	4444	False	NA	NA	False	NA	NA	NA	84127626	84127440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84127400_84127600
ES.12466.1	chr15	-	163	1	Intergenic	novelGene_10421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAACTTAA	4085	False	NA	NA	False	NA	NA	NA	84127985	84127822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84127800_84128000
ES.12467.1	chr15	-	157	1	Intergenic	novelGene_10422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	84133029	84132872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84132900_84133000
ES.12468.1	chr15	-	185	1	Intergenic	novelGene_10423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGATAGTACTCA	9265	False	NA	NA	False	NA	NA	NA	84173801	84173616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84173600_84173800
ES.12469.1	chr15	+	2884	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	-265	0	-265	0	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGACTTAATGACAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	84208655	84227143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
ES.1247.1	chr1	+	4573	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTTGTCTTTTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	128031001	128165474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.10	chr1	+	4625	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	69.803444279873	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTTGTCTTTTTTCTA	NA	False	NA	21	True	AATAAA	-17	NA	128031040	128165475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.11	chr1	+	4378	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	70.5257330129452	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031041	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.12	chr1	+	4308	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	80.8438247954749	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031041	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080996_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.13	chr1	+	6762	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	7	-1	intron_retention	FALSE	canonical	3	184	junction_13	24.9914448171687	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031044	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.14	chr1	+	6732	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_4	85.1298109403739	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031044	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128112392_128114494_128114647_128121196_128121494_128123888_128123938_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.15	chr1	+	4476	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	63.1145488852747	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031046	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.16	chr1	+	4763	26	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	77.3029986481766	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTTGTCTTTTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	128031051	128165474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.17	chr1	+	11118	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-5	0	intron_retention	FALSE	canonical	3	143	junction_12	29.9259416471909	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031052	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.18	chr1	+	3528	16	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	95.7430357200402	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031052	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.19	chr1	+	4637	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	56.201870818985	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAGACCCACTTTGTC	NA	False	NA	12	True	AATAAA	-8	NA	128031053	128165466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114723_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.2	chr1	+	4583	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	55.3902463894598	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031028	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102736_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.20	chr1	+	4274	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	70.5361637743364	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCACTTTGTCTTTT	NA	False	NA	16	True	AATAAA	-12	NA	128031053	128165470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133_128164481_128164873
ES.1247.21	chr1	+	4355	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_13	77.6328424254991	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031053	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.22	chr1	+	4753	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	81.3223314963362	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031053	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.24	chr1	+	4646	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	71.2156349874567	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031058	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.25	chr1	+	8372	22	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	2	2	intron_retention	FALSE	canonical	2	8	junction_6	90.9363486243745	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTTGTCTTTTTTCTA	NA	False	NA	21	True	AATAAA	-17	NA	128031062	128165475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102736_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128163364_128164133
ES.1247.26	chr1	+	4391	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	78.0805652463348	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031063	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.28	chr1	+	4302	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	53.9120036006028	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031063	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.29	chr1	+	4525	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	76.2143529739895	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031065	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128163278_128163364_128164133
ES.1247.3	chr1	+	4695	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	56.9085371207363	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTTGTCTTTTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	128031029	128165474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.30	chr1	+	4411	22	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	59.1924491108962	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031070	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.31	chr1	+	4397	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	71.0283896488289	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031071	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.32	chr1	+	4782	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.448325312724	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031071	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095743_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.33	chr1	+	4625	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4389018148983	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031071	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031199_128079484_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.34	chr1	+	8375	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_20	64.7594064081542	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031071	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159064_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.37	chr1	+	4691	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.8939548927914	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031074	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128077525_128077670_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.39	chr1	+	4688	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	80.4413227141374	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031075	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.4	chr1	+	4593	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTTGTCTTTTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	128031029	128165474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.40	chr1	+	4766	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	83.7287620832889	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031077	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.42	chr1	+	4642	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	69.6543051233893	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031078	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102113_128102215_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.43	chr1	+	4390	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	98.2240918625478	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031079	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128098839_128098894_128102685_128102746_128102828_128102970_128106619_128106725_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.44	chr1	+	4223	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.7575693591316	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031079	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.45	chr1	+	4413	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.3909064834491	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031079	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.46	chr1	+	4562	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	13	4303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	55.6264825020921	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACTTCTAGGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	128031080	128169776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133_128165471_128169752
ES.1247.48	chr1	+	4537	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.0725873674572	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102870_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.49	chr1	+	4663	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_22	75.1280388551586	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162730_128162886_128163278_128163364_128164133
ES.1247.5	chr1	+	4646	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	61.9559515345827	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031029	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.50	chr1	+	4776	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	87.1802729979667	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCACTTTGTCTTTT	NA	False	NA	16	True	AATAAA	-12	NA	128031083	128165470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109956_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.51	chr1	+	4083	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	-454	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTGCTAAACACAGAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	128031083	128165018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.52	chr1	+	4519	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.1853920422751	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031083	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109932_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.53	chr1	+	4143	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	55.6264825020921	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031083	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133_128164481_128164873
ES.1247.54	chr1	+	4557	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.7118875127182	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031083	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102664_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.55	chr1	+	4452	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	57.3911474153714	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCACTTTGTCTTTT	NA	False	NA	16	True	AATAAA	-12	NA	128031083	128165470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128163278_128163364_128164133
ES.1247.56	chr1	+	5195	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	16	0	intron_retention	FALSE	canonical	1	1	junction_3	67.605884030575	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031083	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128089938_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.57	chr1	+	4485	23	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	57.5238362380082	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031084	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.59	chr1	+	4564	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	69.8261606300485	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031086	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080996_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.6	chr1	+	4681	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	65.5311630702014	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031030	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.60	chr1	+	4618	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	81.4497243703132	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031086	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128089938_128089981_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.61	chr1	+	4577	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.5745879437522	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031086	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128102685_128102736_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.62	chr1	+	4736	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	78.9922530484266	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031088	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162730_128162886_128163278_128163364_128164133
ES.1247.63	chr1	+	4230	21	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.3373763424512	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031089	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.64	chr1	+	4523	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	56.4462037079862	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031090	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163284_128163364_128164133
ES.1247.66	chr1	+	4624	26	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	89.3071105791694	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128031091	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128098839_128098894_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.67	chr1	+	4534	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	74.9782838931084	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031092	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128098839_128098894_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.68	chr1	+	179	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	5262	False	NA	NA	False	NA	NA	NA	128049745	128049924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128049700_128049900
ES.1247.69	chr1	+	4353	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_11	40.0861932909822	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128079479	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.7	chr1	+	4979	28	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.4611596514405	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031032	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128098839_128098894_128102113_128102215_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.70	chr1	+	4362	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	1373	-6	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	86.1189663808757	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAGACCCACTTTGTC	NA	False	NA	12	True	AATAAA	-8	NA	128080923	128165466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.71	chr1	+	8021	1	FSM	ENSMUSG00000103497.2	ENSMUST00000194793.2	1316	1	-5047	-1658	-5047	1658	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTAATTACTGTTTTGC	NA	False	NA	NA	False	AAAAAG	-12	NA	128085903	128093924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_128085900_128093900
ES.1247.72	chr1	+	4037	22	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-3741	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_11	62.8009850147341	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128095626	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.73	chr1	+	3036	1	FSM	ENSMUSG00000056211.14	ENSMUST00000187605.2	6513	1	1203	2274	1203	-2274	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGAGCTCTGGGATTA	NA	False	NA	NA	False	NA	NA	NA	128100570	128103606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_128100600_128103600
ES.1247.74	chr1	+	4803	19	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-761	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_7	30.0639236656302	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128101668	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.75	chr1	+	3251	15	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	437	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.7758160342248	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	5772	False	NA	19	True	AATAAA	-15	NA	128109914	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128109950_128112136_128112392_128114494_128114647_128116086_128116136_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.76	chr1	+	6818	11	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	4909	-1	intron_retention	FALSE	canonical	1	1	junction_8	87.0863938856122	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCACTTTGTCTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	128114386	128165471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162730_128162886_128163278_128163364_128164133
ES.1247.77	chr1	+	5380	13	NNC	ENSMUSG00000056211.14	novel	6449	8	NA	NA	5521	-635	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.8459449513906	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAACCAGTTACAACCT	NA	False	NA	NA	False	NA	NA	NA	128114998	128164837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128117454_128117513_128117654_128117713_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.78	chr1	+	4130	11	ISM	ENSMUSG00000056211.14	ENSMUST00000036288.11	4795	27	85943	1	-3565	0	3prime_fragment	FALSE	canonical	3	64	junction_1	56.3404827810341	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128117003	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.79	chr1	+	3836	13	NNC	ENSMUSG00000056211.14	novel	6449	8	NA	NA	-3391	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.8459449513906	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128117177	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128117454_128117513_128117654_128117713_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.8	chr1	+	4641	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.1405104158118	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128031033	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128098839_128098894_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.80	chr1	+	5384	9	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	-2182	0	intron_retention	FALSE	canonical	0	0	junction_7	81.9122052871243	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128118386	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128163278_128163364_128164133
ES.1247.81	chr1	+	5951	9	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	551	0	intron_retention	FALSE	canonical	3	218	junction_8	13.9104277432436	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACTTTGTCTTTTTT	NA	False	NA	18	True	AATAAA	-14	NA	128121119	128165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.1247.82	chr1	+	4204	3	ISM	ENSMUSG00000056211.14	ENSMUST00000190288.2	6449	8	25378	-1	-3009	0	3prime_fragment	FALSE	canonical	3	218	junction_2	18	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	4474	False	NA	19	True	AATAAA	-15	NA	128160106	128165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128162886_128163278_128163364_128164133
ES.1247.9	chr1	+	4279	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	53.173581335717	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACTTTGTCTTTTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	128031040	128165474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ES.12470.1	chr15	+	1023	4	Intergenic	novelGene_10424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	84352209	84361202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84352268_84358111_84358284_84359582_84359779_84360605
ES.12471.1	chr15	-	176	1	Intergenic	novelGene_10425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTCTAAAAAAGAA	NA	False	NA	0	True	NA	NA	NA	84413185	84413009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84413000_84413200
ES.12472.1	chr15	-	4485	1	FSM	ENSMUSG00000055745.5	ENSMUST00000069476.5	4426	1	-41	-18	-41	18	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTCTCTGGGTTTTTG	4986	False	NA	1	True	ATTAAA	-32	NA	84442065	84437580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84437600_84442100
ES.12473.1	chr15	+	155	1	Intergenic	novelGene_10426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCCTAAGT	NA	False	NA	NA	False	NA	NA	NA	84519892	84520047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84519900_84520000
ES.12474.1	chr15	+	1838	10	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6448	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.3296662001029	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8422	False	NA	4	True	AATAAA	-14	NA	84547372	84587873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84547463_84565400_84565521_84566422_84566539_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.10	chr15	+	1654	8	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.1349887328476	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	NA	False	NA	4	True	AATAAA	-14	NA	84565230	84587873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84565378_84572103_84572185_84577664_84577714_84577959_84578018_84583326_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.11	chr15	+	5419	6	ISM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	8473	1	8473	-1	3prime_fragment	FALSE	canonical	3	134	junction_5	10.3421467790783	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGTCTGCCCCCTGG	NA	False	NA	3	True	AATAAA	-13	NA	84573675	84587872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.12	chr15	+	4185	3	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	12061	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.5	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGTCTGCCCCCTGG	NA	False	NA	3	True	AATAAA	-13	NA	84577263	84587872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84577714_84577959_84581304_84587481
ES.12474.13	chr15	+	1353	4	ISM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	18088	2	18088	-2	3prime_fragment	FALSE	canonical	3	134	junction_3	10.9848380355227	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	NA	False	NA	2	True	AATAAA	-12	NA	84583290	84587871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.3	chr15	+	1559	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6405	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8465	False	NA	4	True	AATAAA	-14	NA	84547415	84587873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.4	chr15	+	1676	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-6402	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	42.0979141407267	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8468	False	NA	4	True	AATAAA	-14	NA	84547418	84587873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84547463_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.5	chr15	+	7962	8	NIC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6364	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52.8849347785417	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	8506	False	NA	4	True	AATAAA	-14	NA	84547456	84587873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84553907_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.6	chr15	+	1814	9	NNC	ENSMUSG00000036106.16	novel	1830	8	NA	NA	-426	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.5861061655606	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	NA	False	NA	2	True	AATAAA	-12	NA	84564776	84587871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84564961_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.7	chr15	+	1889	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-54	-5	-54	4	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCCCCCTGGTGTCCT	NA	False	NA	9	True	AATAAA	-19	NA	84565148	84587878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.8	chr15	+	1391	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-39	478	-39	-478	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGTTCATGTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	84565163	84587395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12474.9	chr15	+	4581	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	-16	-2735	-16	2734	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAACTGGAGTGACCTC	NA	False	NA	NA	False	NA	NA	NA	84565186	84590608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ES.12475.1	chr15	+	4137	12	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-335	2272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.989143138924	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCCATCTCTGCTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	84603917	84658680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.10	chr15	+	2152	12	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-2	651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.989143138924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTTCCATACGTTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	84604281	84657059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.11	chr15	+	2429	1	NIC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	1	-34674	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGATTTTATTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	84604284	84606713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84604300_84606700
ES.12475.13	chr15	+	1485	12	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.989143138924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTGTGCTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	84604290	84656407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617096_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.14	chr15	+	1636	13	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.9552754927443	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84604292	84656406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604329_84604580_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.15	chr15	+	1495	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	47	2	16	1	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84604299	84656406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.16	chr15	+	3770	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	49	-2275	18	2275	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCATCTCTGCTGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	84604301	84658683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.17	chr15	+	3380	12	FSM	ENSMUSG00000078954.10	ENSMUST00000172307.9	1544	12	56	-1892	25	1892	multi-exon	FALSE	non_canonical	0	0	junction_1	58.989143138924	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGTGTAGGCATCTGCT	NA	False	NA	NA	False	NA	NA	NA	84604308	84658300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84604329_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.18	chr15	+	1736	12	NNC	ENSMUSG00000078954.10	novel	1464	11	NA	NA	294	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.4133512961664	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTGGGGGTTTTGTGCT	NA	False	NA	8	True	ATTAAA	-15	NA	84604577	84656404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654062_84654302_84655981
ES.12475.19	chr15	+	4123	13	NNC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	84.1808156424148	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTGTGCTTCTG	1056	False	NA	12	True	ATTAAA	-19	NA	84617126	84656408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84641422_84643951_84645755_84645918_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.2	chr15	+	1661	13	NNC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.9552754927443	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTGTGCTTC	NA	False	NA	10	True	ATTAAA	-17	NA	84604247	84656406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604309_84604580_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.20	chr15	+	4723	11	NNC	ENSMUSG00000078954.10	novel	375	2	NA	NA	4273	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	92.3950756263558	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTGTGCTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	84630448	84656407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84630773_84637173_84639917_84640538_84640638_84641220_84641332_84643477_84643951_84645755_84645918_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.21	chr15	+	3059	1	Genic_Genomic	ENSMUSG00000078954.10	novel	NA	NA	NA	NA	-2918	-4266	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTATCCATACGTTCT	NA	False	NA	NA	False	NA	NA	NA	84634062	84637121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_84634100_84637100
ES.12475.22	chr15	+	947	3	ISM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	33919	0	-3075	0	3prime_fragment	FALSE	canonical	3	209	junction_1	0.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84651011	84656405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84651431_84654197_84654302_84655981
ES.12475.23	chr15	+	1798	2	FSM	ENSMUSG00000078954.10	ENSMUST00000169075.2	375	2	-1159	-264	-1159	0	multi-exon	FALSE	canonical	3	210	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84652927	84656405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84654302_84655981
ES.12475.24	chr15	+	1739	3	Intergenic	novelGene_10427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGTGTGTCACCGACT	NA	False	NA	NA	False	NA	NA	NA	84657151	84661748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84657213_84657831_84657894_84660132
ES.12475.3	chr15	+	3949	9	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	0	1424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	93.4089630335334	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGGCGCCAATGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	84604252	84644525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604309_84604580_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84641422
ES.12475.4	chr15	+	1528	12	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.989143138924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTGTGCTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	84604253	84656407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.5	chr15	+	3831	8	NNC	ENSMUSG00000078954.10	novel	1464	11	NA	NA	1	1435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.0401114520523	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGTTAATTTGCTGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	84604253	84644536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84641422
ES.12475.6	chr15	+	2363	12	NNC	ENSMUSG00000078954.10	novel	1464	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.4133512961664	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84604254	84656405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84652269_84654197_84654302_84655981
ES.12475.7	chr15	+	2606	11	NNC	ENSMUSG00000078954.10	novel	1464	11	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	60.2093016069776	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTGTGCTTCT	NA	False	NA	11	True	ATTAAA	-18	NA	84604272	84656407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.8	chr15	+	5045	12	NNC	ENSMUSG00000078954.10	novel	1544	12	NA	NA	-8	3538	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.989143138924	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCGTGTCTGTGAAAT	NA	False	NA	NA	False	ATTAAA	-36	NA	84604275	84659946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604314_84617090_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12475.9	chr15	+	1744	14	NNC	ENSMUSG00000078954.10	novel	1527	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.5691858467768	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	NA	False	NA	9	True	ATTAAA	-16	NA	84604279	84656405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84604309_84604580_84604715_84617091_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84637237_84637354_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ES.12476.1	chr15	-	1769	3	NNC	ENSMUSG00000116396.2	novel	1237	3	NA	NA	-117	21973	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTGTTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	84604584	84576856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84578135_84602897_84603348_84604543
ES.12477.1	chr15	-	2444	1	Antisense	novelGene_ENSMUSG00000078954.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGAGGGCTTTCTAATAA	NA	False	NA	NA	False	AAAAAG	-5	NA	84654793	84652349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_84652300_84654800
ES.12478.1	chr15	-	3724	13	FSM	ENSMUSG00000016624.16	ENSMUST00000159939.8	3639	13	-80	-5	-80	2	multi-exon	FALSE	canonical	0	0	junction_4	3.72677996249965	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTGGTCCTGTGTCCTTG	NA	False	NA	-2	True	ATTAAA	-15	NA	84740330	84669579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84676143_84678096_84678120_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.2	chr15	-	3761	12	FSM	ENSMUSG00000016624.16	ENSMUST00000162044.8	2568	12	-439	-754	-141	1	multi-exon	FALSE	canonical	1	4	junction_7	2.56163687338279	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGTCCTGTGTCCTT	NA	False	NA	-3	True	ATTAAA	-14	NA	84740391	84669580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84676143_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.3	chr15	-	3536	12	NIC	ENSMUSG00000016624.16	novel	3639	13	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_3	3.89107901073322	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGGTGGTCCTGTGTCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	84740303	84669581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84671651_84675265_84675370_84675554_84675631_84678096_84678120_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.4	chr15	-	6632	12	NNC	ENSMUSG00000016624.16	novel	3639	13	NA	NA	-88	0	intron_retention	TRUE	non_canonical	0	0	junction_4	3.34268660197277	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCGGTGGTCCTGTGT	NA	False	NA	-7	True	ATTAAA	-10	NA	84740338	84669584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84677606_84677815_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.5	chr15	-	5129	11	NIC	ENSMUSG00000016624.16	novel	2568	12	NA	NA	-88	274	intron_retention	FALSE	canonical	1	4	junction_6	2.65329983228432	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGAGATGAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	84740338	84671297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.6	chr15	-	4927	12	NNC	ENSMUSG00000016624.16	novel	2568	12	NA	NA	-98	270	intron_retention	FALSE	non_canonical	0	0	junction_4	3.34268660197277	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGGAGGAGTGAGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	84740348	84671301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84677636_84677843_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12478.7	chr15	-	5250	11	NNC	ENSMUSG00000016624.16	novel	2568	12	NA	NA	-80	260	intron_retention	FALSE	non_canonical	0	0	junction_3	3.4928498393146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGATGAGAGAAAGGAGG	NA	False	NA	NA	False	AATAAA	-7	NA	84740330	84671311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84671651_84675265_84675370_84675554_84677606_84677815_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ES.12479.1	chr15	+	160	1	Intergenic	novelGene_10428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAATTAAT	NA	False	NA	NA	False	NA	NA	NA	84754262	84754422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84754300_84754400
ES.1248.1	chr1	-	178	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCTTTATTAGGCT	NA	False	NA	NA	False	NA	NA	NA	128063493	128063315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128063300_128063500
ES.12480.1	chr15	+	172	1	Intergenic	novelGene_10429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAAATCTCC	NA	False	NA	NA	False	NA	NA	NA	84781871	84782043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84781900_84782000
ES.12481.1	chr15	-	189	1	Intergenic	novelGene_10430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	84787144	84786955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84787000_84787100
ES.12482.1	chr15	+	175	1	Intergenic	novelGene_10431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCCAGATGTGAC	NA	False	NA	NA	False	NA	NA	NA	84793097	84793272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84793100_84793300
ES.12483.1	chr15	-	1941	3	NNC	ENSMUSG00000100967.2	novel	8038	2	NA	NA	-3185	-2241	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	84807424	84796879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84798533_84800095_84800227_84807267
ES.12483.2	chr15	-	179	1	ISM	ENSMUSG00000100967.2	ENSMUST00000189185.2	8038	2	2297	7125	2297	-7125	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84801942	84801763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_84801800_84801900
ES.12483.3	chr15	-	3449	1	Genic_Genomic	ENSMUSG00000100967.2	novel	NA	NA	NA	NA	-3161	-9313	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGTGTTTTTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	84807400	84803951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_84804000_84807400
ES.12484.1	chr15	+	1965	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-99	2900	-99	56	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGTTTTTAATGTTGA	NA	False	NA	12	True	AATACA	-20	NA	84807512	84824264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.10	chr15	+	3588	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-17	1195	-17	-1195	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGACTGCCTTCTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	84807594	84825969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.11	chr15	+	1947	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTCTCCCTTCCTAAG	NA	False	NA	24	True	AATAAA	-18	NA	84807598	84824209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.12	chr15	+	3055	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-13	1109	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCACTTGCATTTCT	NA	False	NA	NA	False	AATAAA	-30	NA	84807598	84825317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.13	chr15	+	5079	10	NNC	ENSMUSG00000016619.11	novel	1900	9	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	217.956162768775	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGCGTTGGGTACT	NA	False	NA	11	True	AATAAA	-11	NA	84807599	84827156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84808969_84809098_84809512_84809694_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.16	chr15	+	4311	7	NIC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-15	561	intron_retention	FALSE	canonical	3	399	junction_4	38.9258554462483	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTTTATATCATTTC	NA	False	NA	11	True	ATTAAA	-14	NA	84807634	84824769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84821770_84822558_84822678_84823846
ES.12484.18	chr15	+	2466	9	NNC	ENSMUSG00000016619.11	novel	1900	9	NA	NA	171	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	153.622914957372	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGCGTTGGGTACT	NA	False	NA	11	True	AATAAA	-11	NA	84807820	84827156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846_84824068_84826150
ES.12484.2	chr15	+	4877	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-97	-14	-97	14	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTGTGATATTCTTG	NA	False	NA	33	True	AATAAA	-33	NA	84807514	84827178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.3	chr15	+	4925	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGGTACTGTTCTGTTC	NA	False	NA	20	True	AATAAA	-20	NA	84807576	84827165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.4	chr15	+	4848	9	NNC	ENSMUSG00000016619.11	novel	1900	9	NA	NA	-22	41646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.265801459688	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTCCAACACTCAACAG	NA	False	NA	NA	False	NA	NA	NA	84807589	84868810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846_84827167_84868752
ES.12484.5	chr15	+	2533	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-21	579	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATACCACAAATAAGCCT	NA	False	NA	29	True	ATTAAA	-32	NA	84807590	84824787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.6	chr15	+	2448	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-21	2339	-21	617	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATCGTGCTGAAAAGG	NA	False	NA	67	True	AAGAAA	-4	NA	84807590	84824825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.7	chr15	+	3973	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	-20	813	-20	-813	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAAAATCTCACGTTGT	NA	False	NA	NA	False	NA	NA	NA	84807591	84826351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ES.12484.8	chr15	+	4750	9	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.265801459688	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	19	True	AATAAA	-19	NA	84807593	84827164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846_84825839_84825872
ES.12484.9	chr15	+	1866	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	-17	45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	159.658052968057	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTGGGAAGATGGTT	NA	False	NA	1	True	AATACA	-9	NA	84807594	84824253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822564_84822678_84823846
ES.12485.1	chr15	-	6893	10	FSM	ENSMUSG00000036046.15	ENSMUST00000047144.13	6845	10	-48	0	-48	0	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGAAGTCCAGTGATTC	NA	False	NA	74	True	AATAAA	-37	NA	84872249	84828136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.10	chr15	-	3388	9	NIC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-25	2	intron_retention	FALSE	canonical	3	238	junction_5	19.9683343070973	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872226	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.11	chr15	-	2699	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.6447820494434	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872211	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84832857_84832950_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.12	chr15	-	5031	10	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_1	85.8682597045693	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872197	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833316_84833418_84833480_84833751_84833911_84834812_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.16	chr15	-	2739	10	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.2528582457159	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCCTCAGTTTGCC	NA	False	NA	-12	True	ATTAAA	-17	NA	84872210	84832200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833480_84833751_84833860_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.17	chr15	-	2745	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6447820494434	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCCTCAGTTTGCC	NA	False	NA	-12	True	ATTAAA	-17	NA	84872268	84832200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809_84871950_84872052
ES.12485.18	chr15	-	2692	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6447820494434	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCCTCAGTTTGCC	NA	False	NA	-12	True	ATTAAA	-17	NA	84872200	84832200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809_84871952_84872039
ES.12485.19	chr15	-	1982	10	FSM	ENSMUSG00000036046.15	ENSMUST00000165743.2	5032	10	-28	3078	1	-798	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCGAGAGTCGGTCCC	NA	False	NA	NA	False	NA	NA	NA	84872200	84832998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.2	chr15	-	6654	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	4	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6447820494434	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTGTTTCTGGTGAA	NA	False	NA	-4	True	AATAAA	-25	NA	84872197	84828214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809_84871955_84872063
ES.12485.20	chr15	-	171	1	Intergenic	novelGene_10432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCAAAAAAAACCCCACC	9271	False	NA	NA	False	NA	NA	NA	84845910	84845739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84845700_84845900
ES.12485.21	chr15	-	204	1	Intergenic	novelGene_10433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGACAGGCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	84866861	84866657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84866700_84866900
ES.12485.3	chr15	-	6691	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-27	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.6447820494434	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTGTTTCTGGTGAA	NA	False	NA	-4	True	AATAAA	-25	NA	84872228	84828214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833316_84833418_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.5	chr15	-	5142	9	NIC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-3	3	intron_retention	FALSE	canonical	3	237	junction_3	22.1867077323338	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTCAGTTTGCCCAC	NA	False	NA	-9	True	ATTAAA	-20	NA	84872204	84832197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84833480_84833751_84833911_84834812_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.6	chr15	-	2655	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6447820494434	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872180	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809_84871954_84872060
ES.12485.7	chr15	-	2901	9	NIC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-36	2	intron_retention	FALSE	canonical	3	237	junction_4	22.2987527678119	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872237	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84840130_84844670_84844823_84871809
ES.12485.8	chr15	-	2688	11	NNC	ENSMUSG00000036046.15	novel	6845	10	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.6447820494434	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84872210	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84833316_84833419_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ES.12485.9	chr15	-	6765	6	NIC	ENSMUSG00000036046.15	novel	5106	8	NA	NA	3786	2	intron_retention	FALSE	canonical	3	237	junction_2	14.1901374200534	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCAGTTTGCCCA	NA	False	NA	-10	True	ATTAAA	-19	NA	84841398	84832198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84833480_84833751_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006
ES.12486.1	chr15	-	148	1	Intergenic	novelGene_10434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	84895379	84895231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84895200_84895400
ES.12487.1	chr15	+	174	1	Intergenic	novelGene_10435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	84903065	84903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84903100_84903200
ES.12488.1	chr15	+	2581	9	NNC	ENSMUSG00000022434.9	novel	596	5	NA	NA	-638	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9904940386392	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84920651	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84920873_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.10	chr15	+	2538	10	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	70.3379847505275	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84921349	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84943589_84943672_84945732
ES.12488.12	chr15	+	2733	11	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-23	-4	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	78.6686722908173	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGTGTGCTCAGTT	NA	False	NA	4	True	AATAAA	-11	NA	84921364	84947027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
ES.12488.14	chr15	+	5806	8	ISM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	84	-666	-14	666	intron_retention	FALSE	canonical	3	162	junction_1	14.5054528803932	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTGTTTTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	84921373	84947697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942
ES.12488.15	chr15	+	5248	9	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	7	junction_1	70.9585045995193	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84921388	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84923040_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942
ES.12488.16	chr15	+	4113	5	NNC	ENSMUSG00000022434.9	novel	1974	5	NA	NA	6	48	intron_retention	FALSE	non_canonical	0	0	junction_4	81.7843964335496	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGAGGGTGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	84921393	84936265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84928980_84929037_84929820_84932782_84934894_84935639_84935965
ES.12488.17	chr15	+	2391	9	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.4228925593384	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGTGTGCTCAGTT	NA	False	NA	4	True	AATAAA	-11	NA	84921396	84947027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84928980_84929021_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.19	chr15	+	5027	4	NNC	ENSMUSG00000022434.9	novel	596	5	NA	NA	2060	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	82.4311160235556	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	5557	False	NA	6	True	AATAAA	-13	NA	84929002	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84929165_84937312_84938058_84939854_84939888_84942942
ES.12488.20	chr15	+	3451	7	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	3095	-2	intron_retention	FALSE	canonical	3	17	junction_6	60.9683433339704	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	6592	False	NA	6	True	AATAAA	-13	NA	84930037	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84944391_84945732
ES.12488.21	chr15	+	2426	2	ISM	ENSMUSG00000022434.9	ENSMUST00000229153.2	1974	5	10401	-48	4784	48	3prime_fragment	FALSE	canonical	3	203	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGAGGGTGTGTGTC	8281	False	NA	NA	False	NA	NA	NA	84931726	84936265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_84932782_84934894
ES.12488.22	chr15	+	2283	4	NNC	ENSMUSG00000022434.9	novel	596	5	NA	NA	1011	256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.5086455682762	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-21	NA	84938908	84946206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84939888_84942942_84943672_84944289_84944391_84945732
ES.12488.23	chr15	+	6319	1	Genic_Genomic	ENSMUSG00000022434.9	novel	NA	NA	NA	NA	6681	3866	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTAGCTCCTTCAGGA	NA	False	NA	NA	False	NA	NA	NA	84944578	84950897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_84944600_84950900
ES.12488.3	chr15	+	2515	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	1	2	1	-2	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84921290	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.4	chr15	+	2710	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921290	84947031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.5	chr15	+	3150	5	FSM	ENSMUSG00000022434.9	ENSMUST00000229153.2	1974	5	-23	-1153	13	1153	multi-exon	FALSE	canonical	3	162	junction_1	16.8430252627015	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAATGTGTGTGTGTATA	NA	False	NA	NA	False	NA	NA	NA	84921302	84937370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894
ES.12488.6	chr15	+	1859	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-10	255	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAAGTTTTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-20	NA	84921315	84946205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.7	chr15	+	2584	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	67.2724330384562	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84921322	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
ES.12488.8	chr15	+	2595	10	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	67.1357570639016	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGTGTGCTCAGTT	NA	False	NA	4	True	AATAAA	-11	NA	84921333	84947027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84923040_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12488.9	chr15	+	2439	9	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.8496814945577	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTGCTCAGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	84921333	84947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932592_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ES.12489.1	chr15	+	174	1	Intergenic	novelGene_10437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAAGGGGGCTG	37	False	NA	NA	False	NA	NA	NA	84988012	84988186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_84988000_84988200
ES.1249.1	chr1	-	4565	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128129989	128125424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128125400_128130000
ES.12490.1	chr15	-	3607	1	Antisense	novelGene_ENSMUSG00000022434.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6807	False	NA	NA	False	NA	NA	NA	84942284	84938677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_84938700_84942300
ES.12491.1	chr15	-	4262	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-20	-195	-20	195	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTCAGAGAGAATGTG	NA	False	NA	NA	False	AATAAA	-26	NA	85016185	84948694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.10	chr15	-	3768	23	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	41.3606642288847	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016183	84948889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.11	chr15	-	3878	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	32.4523789545692	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016182	84948889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.12	chr15	-	3535	22	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	34.4981513849596	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016159	84948889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85016029
ES.12491.13	chr15	-	4027	25	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.8414107657085	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016182	84948889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976251_84980846_84980940_84981693_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.14	chr15	-	3940	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_22	32.5126120650006	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016171	84948889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85013871_85014061_85016029
ES.12491.16	chr15	-	8591	23	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	89	junction_17	18.2564943726023	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTACTCTGGTCTT	NA	False	NA	-8	True	TATAAA	-15	NA	85016182	84948891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.17	chr15	-	8441	23	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	89	junction_17	18.8695500040508	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTACTCTGGTCTT	NA	False	NA	-8	True	TATAAA	-15	NA	85016175	84948891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84955136_84955782_84955940_84970293_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.18	chr15	-	4011	25	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	32.5708362649779	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTACTCTGGTCTT	NA	False	NA	-8	True	TATAAA	-15	NA	85016183	84948891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016081
ES.12491.19	chr15	-	4242	24	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	41.4003917682348	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTACTCTGGTCTT	NA	False	NA	-8	True	TATAAA	-15	NA	85016182	84948891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998545_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.2	chr15	-	3267	19	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	35.3670785747647	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTCTTGTCTTGCGT	NA	False	NA	1	True	TATAAA	-24	NA	85016182	84948882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.20	chr15	-	3926	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	32.2256341036719	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATCTTTACTCTGGTCT	NA	False	NA	-9	True	TATAAA	-14	NA	85016158	84948892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.21	chr15	-	4105	25	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-5	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	32.5533749743743	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATCTTTACTCTGGTCT	NA	False	NA	-9	True	TATAAA	-14	NA	85016170	84948892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955726_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.23	chr15	-	2146	1	Intergenic	novelGene_10436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTCCTCCATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	84965474	84963328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_84963300_84965500
ES.12491.24	chr15	-	4922	16	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	-22559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.2821077134268	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTTACTGTGTACTTT	NA	False	NA	NA	False	NA	NA	NA	85016178	84977655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84978196_84978924_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.25	chr15	-	3354	9	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-17	48225	-17	-42018	5prime_fragment	FALSE	canonical	3	89	junction_3	19.1621371459449	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCATTTGTTTTCTTCC	NA	False	NA	NA	False	AATGAA	-16	NA	85016182	84997114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.26	chr15	-	3340	9	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	-42018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.9430946136861	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCATTTGTTTTCTTCC	NA	False	NA	NA	False	AATGAA	-16	NA	85016182	84997114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84999074_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.27	chr15	-	1844	6	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	-42968	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	51.6085264273259	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	85016178	84998064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85013871_85014061_85016029
ES.12491.28	chr15	-	1750	9	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-13	49825	-13	-43618	5prime_fragment	FALSE	canonical	3	89	junction_3	19.1621371459449	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTTCAAATTGTATT	NA	False	NA	NA	False	AGTAAA	-14	NA	85016178	84998714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.29	chr15	-	108	1	Intergenic	novelGene_10438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTTATAGAGTTATAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	85013260	85013152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85013200_85013300
ES.12491.3	chr15	-	3811	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-18	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	31.6045389288844	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTGGTCTTGTCTTGC	NA	False	NA	-1	True	TATAAA	-22	NA	85016183	84948884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.4	chr15	-	3861	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	32.0725194338633	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTGGTCTTGTCTTGC	NA	False	NA	-1	True	TATAAA	-22	NA	85016178	84948884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011959_85012073_85013871_85014061_85016029
ES.12491.5	chr15	-	4104	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	-52	-5	-52	5	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTGGTCTTGTCTTGC	NA	False	NA	-1	True	TATAAA	-22	NA	85016217	84948884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.6	chr15	-	4066	25	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6635840382255	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCTGGTCTTGTCTTG	NA	False	NA	-2	True	TATAAA	-21	NA	85016165	84948885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976281_84980826_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ES.12491.8	chr15	-	3668	23	NNC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.9428895787167	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACTCTGGTCTTGTCT	NA	False	NA	-4	True	TATAAA	-19	NA	85016178	84948887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980950_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011959_85012073_85013871_85014061_85016029
ES.12491.9	chr15	-	3748	23	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	32.7840416731945	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTACTCTGGTCTTGTC	NA	False	NA	-5	True	TATAAA	-18	NA	85016182	84948888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85013871_85014061_85016029
ES.12492.1	chr15	-	866	1	Intergenic	novelGene_10439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	85075311	85074445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85074400_85075300
ES.12493.1	chr15	-	166	1	Intergenic	novelGene_10440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAAAAAAAGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	85088760	85088594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85088600_85088800
ES.12494.1	chr15	+	2909	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	-94	844	-94	-844	multi-exon	TRUE	canonical	3	136	junction_16	137.738202761616	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090055	85169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.10	chr15	+	2171	15	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	136.909995759168	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCATGCCTCTTGTAC	NA	False	NA	27	True	AATAAA	-17	NA	85090233	85136078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122797_85123564_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.12	chr15	+	2312	15	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.047387428503	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTTGTACCTTGGTT	NA	False	NA	34	True	AATAAA	-24	NA	85090234	85136085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108381_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.13	chr15	+	2176	15	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	32	-9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	135.658033454773	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGCATGCCTCTTGTA	NA	False	NA	26	True	AATAAA	-16	NA	85090237	85136077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116795_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.16	chr15	+	2828	18	NNC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	48	-844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	178.369450578438	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090253	85169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108100_85108218_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.18	chr15	+	2688	17	NNC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	50	-844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.463969341764	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090255	85169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115638_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.19	chr15	+	2166	15	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	52	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	192.756547838702	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	False	NA	28	True	AATAAA	-18	NA	85090257	85136079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106213_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116795_85116878_85121808_85121953_85122663_85122793_85123494_85123627_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.2	chr15	+	2216	16	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	27	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	132.303119976649	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	False	NA	28	True	AATAAA	-18	NA	85090176	85136079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645_85135743_85135821
ES.12494.21	chr15	+	178	1	Intergenic	novelGene_10441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTACCCTGAT	NA	False	NA	NA	False	NA	NA	NA	85096879	85097057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85096900_85097100
ES.12494.22	chr15	+	4150	14	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	13807	7	13807	-7	3prime_fragment	FALSE	canonical	3	356	junction_13	65.7376892427947	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	False	NA	28	True	AATAAA	-18	NA	85104012	85136079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.24	chr15	+	3258	11	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	21947	1	21947	-1	3prime_fragment	FALSE	canonical	3	356	junction_10	32.7408002345697	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTTGTACCTTGGTT	NA	False	NA	34	True	AATAAA	-24	NA	85112152	85136085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.25	chr15	+	5285	1	NIC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	22996	-17600	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACACATATCTGATT	NA	False	NA	NA	False	NA	NA	NA	85113201	85118486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85113200_85118500
ES.12494.26	chr15	+	5750	2	Genic_Genomic	ENSMUSG00000006369.15	novel	2273	15	NA	NA	-17395	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	False	NA	28	True	AATAAA	-18	NA	85130259	85136079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_85133718_85133787
ES.12494.3	chr15	+	2271	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	1	1	1	-1	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTTGTACCTTGGTT	NA	False	NA	34	True	AATAAA	-24	NA	85090206	85136085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ES.12494.4	chr15	+	2740	17	NNC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	6	-844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	170.812214141729	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090211	85169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116752_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.6	chr15	+	2609	16	NIC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	27	-847	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	174.701574119983	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGATTGCAATTTTGT	NA	False	NA	55	True	AATAAA	-45	NA	85090232	85169889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.7	chr15	+	2676	17	NNC	ENSMUSG00000006369.15	novel	3659	17	NA	NA	27	-844	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	170.099224259695	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGCAATTTTGTTCA	NA	False	NA	58	True	NA	NA	NA	85090232	85169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116795_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ES.12494.8	chr15	+	803	4	NNC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	28	-847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	270.594818050079	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGATTGCAATTTTGT	NA	False	NA	55	True	AATAAA	-45	NA	85090233	85169889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85090414_85106104_85106211_85108450_85108503_85169424
ES.12494.9	chr15	+	2106	14	NIC	ENSMUSG00000006369.15	novel	2273	15	NA	NA	28	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	142.068864041976	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	False	NA	28	True	AATAAA	-18	NA	85090233	85136079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85128383_85128508_85135645
ES.12495.1	chr15	+	1826	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	-33	144	-33	-144	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTTTCTTTATTTCTTT	NA	False	NA	30	True	AGTAAA	-20	NA	85220412	85347269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.10	chr15	+	1748	12	NNC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	114	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.622842664552	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGGGACCCTTGATT	NA	False	NA	22	True	AATAAA	-30	NA	85220559	85347410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85220718_85243662_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.12	chr15	+	1541	10	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	114	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	405.73438979427	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGGGACCCTTGATT	NA	False	NA	22	True	AATAAA	-30	NA	85220559	85347410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85322302_85322367_85346480_85346669_85347121
ES.12495.13	chr15	+	1621	11	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	119	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	389.641886865363	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGACTGGGACCCTTGA	NA	False	NA	20	True	AATAAA	-28	NA	85220564	85347408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85220782_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.14	chr15	+	2994	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	122	-1179	122	1179	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATCGGGTATGGCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	85220567	85348592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.15	chr15	+	2497	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	210	-770	210	770	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCGAGTTCTTGTAAGT	NA	False	NA	NA	False	AGTAAA	-35	NA	85220655	85348183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.16	chr15	+	175	1	Intergenic	novelGene_10442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAAAT	NA	False	NA	NA	False	NA	NA	NA	85221777	85221952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85221800_85222000
ES.12495.17	chr15	+	1599	11	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	23208	3	23208	-3	3prime_fragment	FALSE	canonical	3	1134	junction_2	87.886517737364	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGGGACCCTTGATT	1612	False	NA	22	True	AATAAA	-30	NA	85243653	85347410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.18	chr15	+	1450	11	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	23208	152	23208	-152	3prime_fragment	FALSE	canonical	3	1134	junction_2	87.886517737364	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGGACGTTTTCTTT	1612	False	NA	22	True	AGTAAA	-12	NA	85243653	85347261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.19	chr15	+	1827	8	NNC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	39094	-10317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	449.682881459314	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCAGGTATCTCACTC	NA	False	NA	NA	False	NA	NA	NA	85259539	85337096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85336098
ES.12495.2	chr15	+	1958	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	-20	-1	-20	1	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGACCCTTGATTGGAT	NA	False	NA	26	True	AATAAA	-34	NA	85220425	85347414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.20	chr15	+	4871	1	Intergenic	novelGene_10444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTAAACATACTGGCC	NA	False	NA	NA	False	NA	NA	NA	85288751	85293622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85288800_85293600
ES.12495.21	chr15	+	3112	1	Intergenic	novelGene_10445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAGAAAGAAATTGTG	NA	False	NA	NA	False	NA	NA	NA	85303668	85306780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85303700_85306800
ES.12495.3	chr15	+	1561	9	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	14	69524	14	-69524	5prime_fragment	FALSE	canonical	3	1134	junction_3	85.8017336654686	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCACGGTATGTCAT	NA	False	NA	NA	False	CATAAA	-25	NA	85220459	85277889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537
ES.12495.4	chr15	+	2551	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	16	-630	16	630	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTAGAGGGCTTACC	NA	False	NA	20	True	AATAAA	-21	NA	85220461	85348043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ES.12495.5	chr15	+	788	1	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	28	-126152	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAGTGTGCGAGGCT	NA	False	NA	8	True	AATAAA	-8	NA	85220473	85221261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85220500_85221300
ES.12495.6	chr15	+	1473	10	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	34	-151	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	405.73438979427	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGGACGTTTTCTTTA	NA	False	NA	23	True	AGTAAA	-13	NA	85220479	85347262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85322302_85322367_85346480_85346669_85347121
ES.12495.7	chr15	+	2306	11	ISM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	91	-7	91	7	intron_retention	FALSE	canonical	3	1134	junction_3	90.3416293853504	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGATTGGATTCTGCA	NA	False	NA	32	True	AATAAA	-40	NA	85220536	85347420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480
ES.12495.8	chr15	+	1714	1	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	99	-125155	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTGACATAATTCCTT	NA	False	NA	NA	False	NA	NA	NA	85220544	85222258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85220500_85222300
ES.12496.1	chr15	-	179	1	Intergenic	novelGene_10443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGTACCAATATAT	NA	False	NA	NA	False	NA	NA	NA	85257784	85257605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85257600_85257800
ES.12497.1	chr15	-	158	1	Intergenic	novelGene_10446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	85318265	85318107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85318100_85318300
ES.12498.1	chr15	-	2990	4	NNC	ENSMUSG00000022382.16	novel	3134	4	NA	NA	7337	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.55902608401044	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGTGACGTCTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	85443886	85419639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85422070_85427869_85428142_85443103_85443331_85443825
ES.12498.2	chr15	-	3474	4	FSM	ENSMUSG00000022382.16	ENSMUST00000109424.4	3134	4	-344	4	-105	0	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTGTGTGACGTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	85466127	85419641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85465580
ES.12498.4	chr15	-	3308	4	FSM	ENSMUSG00000022382.16	ENSMUST00000229191.2	2521	4	176	-963	176	0	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGCAAGTGTGTGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	85462095	85419647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_85422070_85427869_85428142_85443103_85443331_85461708
ES.12499.1	chr15	+	178	1	Intergenic	novelGene_10447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	85491271	85491449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85491300_85491400
ES.125.1	chr1	+	4439	9	Antisense	novelGene_ENSMUSG00000025935.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	13636819	13660150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_13640309_13642027_13642134_13642228_13642298_13646590_13646677_13648323_13648382_13649672_13649791_13649913_13650036_13651246_13651309_13659821
ES.125.2	chr1	+	4133	10	Antisense	novelGene_ENSMUSG00000025935.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	13636819	13660151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_13639855_13640161_13640309_13642027_13642134_13642228_13642298_13646590_13646677_13648323_13648382_13649672_13649791_13649913_13650036_13651246_13651309_13659821
ES.125.3	chr1	+	4103	6	Antisense	novelGene_ENSMUSG00000025935.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACCTACGAAACAAAAAC	NA	False	NA	NA	False	AAAACA	-4	NA	13636819	13648983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_13639855_13640161_13640309_13642027_13642134_13642228_13642298_13646590_13646677_13648323
ES.1250.1	chr1	-	176	1	Antisense	novelGene_ENSMUSG00000056211.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128136799	128136623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_128136600_128136800
ES.12500.1	chr15	+	179	1	Intergenic	novelGene_10448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	85601788	85601967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85601800_85602000
ES.12501.1	chr15	+	1918	7	ISM	ENSMUSG00000022383.14	ENSMUST00000109422.8	3413	8	-12	4254	-12	-3183	5prime_fragment	FALSE	canonical	0	0	junction_1	0.372677996249965	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGATATACTGTGATG	NA	False	NA	NA	False	AATATA	-30	NA	85619964	85682766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85620298_85620994_85621080_85661721_85661969_85671308_85671470_85673179_85673319_85675040_85675244_85682016
ES.12502.1	chr15	-	4705	1	NIC	ENSMUSG00000064284.13	novel	997	5	NA	NA	-17	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8106	False	NA	0	True	ATTAAA	-15	NA	85695877	85691172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85691200_85695900
ES.12502.10	chr15	-	3107	2	NIC	ENSMUSG00000064284.13	novel	706	4	NA	NA	2	-2	intron_retention	FALSE	canonical	3	306	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8125	False	NA	-2	True	ATTAAA	-13	NA	85695858	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85693526_85695102
ES.12502.11	chr15	-	1788	4	NNC	ENSMUSG00000064284.13	novel	421	4	NA	NA	-17	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	155.660599453498	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8106	False	NA	-2	True	ATTAAA	-13	NA	85695877	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85692569_85693412_85693526_85695102_85695250_85695743
ES.12502.12	chr15	-	1554	3	NIC	ENSMUSG00000064284.13	novel	566	4	NA	NA	11	-2	intron_retention	FALSE	canonical	3	9	junction_2	170.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8097	False	NA	-2	True	ATTAAA	-13	NA	85695886	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85692569_85693412_85693526_85695839
ES.12502.13	chr15	-	957	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	38	2	1	-2	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8124	False	NA	-2	True	ATTAAA	-13	NA	85695859	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
ES.12502.14	chr15	-	1299	5	NNC	ENSMUSG00000064284.13	novel	997	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	139.440623564297	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8136	False	NA	-2	True	ATTAAA	-13	NA	85695847	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695485
ES.12502.2	chr15	-	4199	2	NNC	ENSMUSG00000064284.13	novel	421	4	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8116	False	NA	-2	True	ATTAAA	-13	NA	85695867	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85695250_85695743
ES.12502.3	chr15	-	2398	4	NNC	ENSMUSG00000064284.13	novel	706	4	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	5	junction_3	152.4037036587	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8118	False	NA	-2	True	ATTAAA	-13	NA	85695865	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85694257
ES.12502.4	chr15	-	1091	5	NNC	ENSMUSG00000064284.13	novel	997	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	139.440623564297	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8086	False	NA	-2	True	ATTAAA	-13	NA	85695897	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695743
ES.12502.5	chr15	-	906	4	NNC	ENSMUSG00000064284.13	novel	566	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.740643228166	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8124	False	NA	-2	True	ATTAAA	-13	NA	85695859	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695743
ES.12502.6	chr15	-	1519	4	NNC	ENSMUSG00000064284.13	novel	706	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	7	junction_1	152.383288672566	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8137	False	NA	-2	True	ATTAAA	-13	NA	85695846	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691740_85692471_85692569_85693412_85693526_85695102
ES.12502.7	chr15	-	917	4	NNC	ENSMUSG00000064284.13	novel	566	4	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	163.825788229109	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8105	False	NA	-2	True	ATTAAA	-13	NA	85695878	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85691732_85692456_85692569_85693412_85693526_85695743
ES.12502.8	chr15	-	1691	4	FSM	ENSMUSG00000064284.13	ENSMUST00000154814.2	421	4	-16	-1254	-16	-2	multi-exon	FALSE	canonical	3	77	junction_3	119.678272417715	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTGGTTTGAGTCAC	8107	False	NA	-2	True	ATTAAA	-13	NA	85695876	85691174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_85692569_85693412_85693526_85695102_85695250_85695839
ES.12503.1	chr15	+	2710	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-17	1056	-17	33	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716489	85741967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.10	chr15	+	1854	6	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18919	33	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.23832034148352	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAACAAAAAAAAAAA	547	False	NA	NA	False	NA	NA	NA	85735463	85741967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85735540_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.11	chr15	+	2812	5	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18934	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.56637297521078	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAATGTAAATAGCAG	562	False	NA	NA	False	TTTAAA	-5	NA	85735478	85743022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85735540_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.12	chr15	+	2895	6	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18941	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.23832034148352	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATAGCAGTGAGTTAC	569	False	NA	NA	False	TTTAAA	-13	NA	85735485	85743030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85735540_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.13	chr15	+	1297	1	NIC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	24126	33	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAACAAAAAAAAAAA	3862	False	NA	NA	False	NA	NA	NA	85740670	85741967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85740700_85742000
ES.12503.2	chr15	+	3773	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	-17	-7	-17	7	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATAGCAGTGAGTTAC	NA	False	NA	NA	False	TTTAAA	-13	NA	85716489	85743030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.3	chr15	+	2762	15	NIC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	-14	33	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.21575321815105	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716530	85741967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85716621_85717176_85717270_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.4	chr15	+	3776	15	NIC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	-6	-34	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.21575321815105	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	85716538	85742989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85716621_85717176_85717270_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.5	chr15	+	3265	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	33	451	-5	-451	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGGAGTCTTGCTCTCTG	NA	False	NA	NA	False	AATACA	-13	NA	85716539	85742572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12503.6	chr15	+	6359	11	NIC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	-5	-9	intron_retention	FALSE	canonical	2	10	junction_3	2.62488094968134	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716539	85741925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85738251_85740671
ES.12503.7	chr15	+	2600	14	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.44426363866286	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85716539	85741925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738194_85738251_85740671
ES.12503.8	chr15	+	157	1	Intergenic	novelGene_10449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9356	False	NA	NA	False	NA	NA	NA	85733193	85733350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85733200_85733400
ES.12503.9	chr15	+	1881	6	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18881	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.73498329619309	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACCAAAAAAAAAAA	509	False	NA	NA	False	NA	NA	NA	85735425	85741925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85735571_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ES.12504.1	chr15	+	3173	11	ISM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-93	-42	-93	-1	intron_retention	FALSE	canonical	3	528	junction_1	49.104073150809	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7044	False	NA	29	True	ATTAAA	-40	NA	85743852	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736
ES.12504.10	chr15	+	5857	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	528	junction_1	62.3302633428984	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7119	False	NA	29	True	ATTAAA	-40	NA	85743927	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85759420_85759736_85759953_85760349
ES.12504.11	chr15	+	2816	12	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-17	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	186.649935298964	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGCTTGGAGTTTAC	7120	False	NA	4	True	ATTAAA	-35	NA	85743928	85760748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759034_85759420_85759736_85759953_85760349
ES.12504.15	chr15	+	7207	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	528	junction_1	60.2679203409428	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7120	False	NA	27	True	ATTAAA	-38	NA	85743928	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.16	chr15	+	4193	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	528	junction_1	50.928659859275	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7120	False	NA	27	True	ATTAAA	-38	NA	85743928	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759420_85759736
ES.12504.17	chr15	+	2856	12	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	185.316615374565	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7127	False	NA	29	True	ATTAAA	-40	NA	85743935	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755546_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.18	chr15	+	2902	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	-211	1	-10	-1	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7127	False	NA	29	True	ATTAAA	-40	NA	85743935	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.19	chr15	+	5148	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	528	junction_1	51.0511725842044	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7127	False	NA	29	True	ATTAAA	-40	NA	85743935	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85758078_85759175_85759420_85759736
ES.12504.2	chr15	+	2768	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	-83	-44	-83	1	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACGTGTAGAGCTGT	7054	False	NA	31	True	ATTAAA	-42	NA	85743862	85760775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.20	chr15	+	4989	12	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-8	-3	intron_retention	FALSE	canonical	0	0	junction_4	186.687125010345	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7129	False	NA	27	True	ATTAAA	-38	NA	85743937	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746564_85746714_85746897_85748307_85748464_85751675_85751803_85752880_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.21	chr15	+	6405	9	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	5	junction_7	208.012469578148	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7129	False	NA	27	True	ATTAAA	-38	NA	85743937	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755546_85759420_85759736
ES.12504.22	chr15	+	4466	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	25	-1	intron_retention	FALSE	canonical	3	528	junction_1	51.7567911688772	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7162	False	NA	29	True	ATTAAA	-40	NA	85743970	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736
ES.12504.23	chr15	+	8048	6	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	25	-1	intron_retention	FALSE	canonical	3	528	junction_1	65.3287073192176	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7162	False	NA	29	True	ATTAAA	-40	NA	85743970	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85748464_85751675_85751803_85752880_85753259_85755709
ES.12504.24	chr15	+	6630	9	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	25	-1	intron_retention	FALSE	canonical	3	528	junction_1	56.9314280516482	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7162	False	NA	29	True	ATTAAA	-40	NA	85743970	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.25	chr15	+	4071	11	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	25	1	intron_retention	FALSE	canonical	3	528	junction_1	61.7627719585188	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACGTGTAGAGCTGT	7162	False	NA	31	True	ATTAAA	-42	NA	85743970	85760775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.26	chr15	+	3936	10	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	55	0	intron_retention	FALSE	canonical	3	556	junction_6	55.5877684387492	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7192	False	NA	30	True	ATTAAA	-41	NA	85744000	85760774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759420_85759736_85759953_85760349
ES.12504.27	chr15	+	4131	9	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	556	junction_6	58.7680823236559	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7314	False	NA	30	True	ATTAAA	-41	NA	85744122	85760774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759953_85760349
ES.12504.28	chr15	+	2622	11	NNC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	195.436025338216	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7395	False	NA	29	True	ATTAAA	-40	NA	85744203	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757852_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.3	chr15	+	3840	11	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-57	1	intron_retention	FALSE	canonical	3	528	junction_1	60.572601066819	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACGTGTAGAGCTGT	7080	False	NA	31	True	ATTAAA	-42	NA	85743888	85760775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759420_85759736_85759953_85760349
ES.12504.30	chr15	+	4662	9	NNC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	98	-1	intron_retention	FALSE	canonical	1	2	junction_1	209.580533447169	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7436	False	NA	29	True	ATTAAA	-40	NA	85744244	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85744297_85746199_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.31	chr15	+	2592	10	NNC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	108	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	197.927097191034	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7446	False	NA	27	True	ATTAAA	-38	NA	85744254	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85744297_85746199_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.33	chr15	+	4278	8	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	1714	0	intron_retention	FALSE	canonical	3	556	junction_5	26.5860175003819	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	9052	False	NA	30	True	ATTAAA	-41	NA	85745860	85760774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759420_85759736
ES.12504.35	chr15	+	6121	1	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	10487	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGAGTTTACACTTGA	7744	False	NA	10	True	ATTAAA	-41	NA	85754633	85760754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85754600_85760800
ES.12504.4	chr15	+	5168	11	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-41	-3	intron_retention	FALSE	canonical	3	55	junction_8	180.031691654553	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7096	False	NA	27	True	ATTAAA	-38	NA	85743904	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85755783_85757840_85758078_85759180_85759420_85759736_85759953_85760349
ES.12504.5	chr15	+	4138	10	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	528	junction_1	63.3534081244857	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7097	False	NA	29	True	ATTAAA	-40	NA	85743905	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85759953_85760349
ES.12504.6	chr15	+	6263	9	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	528	junction_1	53.0446451114531	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7110	False	NA	29	True	ATTAAA	-40	NA	85743918	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85759420_85759736
ES.12504.7	chr15	+	4768	11	NIC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	528	junction_1	60.7055186947612	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGACGTGTAGAGCT	7110	False	NA	29	True	ATTAAA	-40	NA	85743918	85760773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85758078_85759175_85759420_85759736_85759953_85760349
ES.12504.8	chr15	+	6070	9	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	556	junction_6	55.9821400091136	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTGGACGTGTAGAG	7113	False	NA	27	True	ATTAAA	-38	NA	85743921	85760771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85759420_85759736_85759953_85760349
ES.12505.1	chr15	+	1538	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	-11	-1	-3	1	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763509	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.10	chr15	+	1453	11	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	13.076696830622	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763535	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.11	chr15	+	2489	9	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	15	-1	intron_retention	FALSE	canonical	3	28	junction_4	9.2736184954957	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATGTGTCTGGGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	85763535	85781592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.12	chr15	+	3824	8	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	15	1	intron_retention	FALSE	canonical	3	28	junction_4	9.55969429961235	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763535	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85780706_85781035_85781119_85781225
ES.12505.13	chr15	+	2428	9	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	19	1	intron_retention	FALSE	canonical	3	14	junction_4	13.2547161418116	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763539	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.14	chr15	+	1680	11	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	25	-1	intron_retention	FALSE	canonical	3	7	junction_6	17.8504901893477	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATGTGTCTGGGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	85763545	85781592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778222_85778378_85778485_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.15	chr15	+	4107	9	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	30	1630	intron_retention	FALSE	canonical	3	28	junction_4	9.2736184954957	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGACTCTATAAAGTC	NA	False	NA	NA	False	AATAAA	-20	NA	85763550	85783225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.16	chr15	+	2745	8	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	-26	0	intron_retention	FALSE	canonical	2	3	junction_4	17.6218787944106	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85763555	85781593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776822_85776941_85778026_85779228_85780560_85781119_85781225
ES.12505.19	chr15	+	186	1	Intergenic	novelGene_10450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTTGAAAGATGTAATA	NA	False	NA	NA	False	NA	NA	NA	85771510	85771696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85771500_85771700
ES.12505.2	chr15	+	1470	11	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	22.6982378170641	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85763520	85781593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85774405_85774529_85776822_85776941_85778026_85778081_85778154_85778222_85778378_85778485_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.20	chr15	+	2222	1	NIC	ENSMUSG00000022386.13	novel	2077	3	NA	NA	291	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	2273	False	NA	NA	False	AATAAA	-15	NA	85779372	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85779400_85781600
ES.12505.3	chr15	+	3134	9	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	7	5	intron_retention	FALSE	canonical	2	3	junction_4	16.5600233997419	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGGCTTGCCTGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	85763527	85781600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776822_85776941_85778026_85778081_85778154_85778222_85779126_85781119_85781225
ES.12505.4	chr15	+	1791	10	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	7	1	intron_retention	FALSE	canonical	3	14	junction_4	13.5628395730374	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763527	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85781119_85781225
ES.12505.5	chr15	+	3166	10	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	8	1631	intron_retention	FALSE	canonical	3	14	junction_4	13.3287028996694	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGACTCTATAAAGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	85763528	85783226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.6	chr15	+	3837	11	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	9	1629	intron_retention	FALSE	canonical	3	7	junction_7	16.7463428843434	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTTGACTCTATAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	85763529	85783224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85778081_85778154_85778222_85778378_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.7	chr15	+	1584	12	NIC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.6645020389947	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763529	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85763660_85764978_85765045_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.8	chr15	+	1533	10	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	9	1	intron_retention	FALSE	canonical	3	14	junction_4	13.3287028996694	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGTCTGGGGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	85763529	85781594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ES.12505.9	chr15	+	3766	8	NNC	ENSMUSG00000022386.13	novel	1526	11	NA	NA	15	0	intron_retention	FALSE	canonical	3	14	junction_4	13.7721991485657	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	85763535	85781595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776826_85776941_85778026_85780706_85781035_85781119_85781225
ES.12506.1	chr15	+	216	1	Intergenic	novelGene_10452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGAAGAGAGGTGG	1024	False	NA	NA	False	NA	NA	NA	85861059	85861275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85861100_85861300
ES.12507.1	chr15	+	2834	1	Antisense	novelGene_ENSMUSG00000016028.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGCTCCAGGTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	85915436	85918270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_85915400_85918300
ES.12508.1	chr15	-	3901	1	Antisense	novelGene_ENSMUSG00000022386.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACTCATTAAAGTCCCA	NA	False	NA	NA	False	NA	NA	NA	85769325	85765424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_85765400_85769300
ES.12509.10	chr15	-	11410	34	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	125	0	intron_retention	FALSE	canonical	3	21	junction_33	10.2925079958585	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGCTGGGTGG	NA	False	NA	-6	True	AATAAA	-20	NA	85918279	85783130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.11	chr15	-	6481	23	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	-8252	0	intron_retention	FALSE	canonical	3	19	junction_1	10.2836828146051	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGCTGGGTGG	6997	False	NA	-6	True	AATAAA	-20	NA	85814875	85783130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85784907_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713
ES.12509.13	chr15	-	8846	35	NNC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	2422	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.3312275484336	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGCTGTGCTGGGTG	NA	False	NA	-7	True	AATAAA	-19	NA	85915982	85783131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808148_85808225_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.14	chr15	-	9773	36	NNC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	1681	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	14.1222071466849	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGCTGTGCTGGGTG	NA	False	NA	-7	True	AATAAA	-19	NA	85916723	85783131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85819112_85819225_85822038_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.17	chr15	-	5673	27	NNC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	-15488	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.2903399540672	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGCTGTGCTGGGTG	NA	False	NA	-7	True	AATAAA	-19	NA	85822111	85783131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85784907_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787479_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044
ES.12509.19	chr15	-	7389	34	NNC	ENSMUSG00000016028.12	novel	6802	34	NA	NA	-512	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.810836780891	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACCCGTGCTGTGCTGGG	NA	False	NA	-9	True	AATAAA	-17	NA	85863443	85783133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85785095_85785214_85785400_85785639_85785871_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802
ES.12509.20	chr15	-	2139	12	NIC	ENSMUSG00000016028.12	novel	6802	34	NA	NA	5659	196	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	8.74146573181499	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGTGTATGCTTTACA	8275	False	NA	NA	False	TATAAA	-27	NA	85800964	85784416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814
ES.12509.21	chr15	-	7207	2	Genic_Genomic	ENSMUSG00000016028.12	novel	11305	35	NA	NA	1376	7518	multi-exon	TRUE	non_canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAGAAA	6437	False	NA	NA	False	NA	NA	NA	85805247	85797921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_85800497_85800615
ES.12509.22	chr15	-	5175	1	Intergenic	novelGene_10451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	85860360	85855185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85855200_85860400
ES.12509.23	chr15	-	2867	1	ISM	ENSMUSG00000016028.12	ENSMUST00000016172.10	11305	35	103	132305	103	-109995	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCACAGTTCCGCATTG	NA	False	NA	NA	False	NA	NA	NA	85918301	85915434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_85915400_85918300
ES.12509.4	chr15	-	11149	35	FSM	ENSMUSG00000016028.12	ENSMUST00000016172.10	11305	35	156	0	156	0	multi-exon	FALSE	canonical	3	19	junction_1	10.8831478247056	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85918248	85783129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_85784907_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.5	chr15	-	10363	35	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	972	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	11.3216575993027	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85917432	85783129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_85784940_85785137_85785400_85785639_85785871_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.7	chr15	-	8217	35	NNC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	2936	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	14.88249825551	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85915468	85783129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85784940_85785137_85785400_85785639_85785871_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814161_85814854_85814889_85815442_85815522_85816476_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ES.12509.9	chr15	-	7318	34	NNC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	-409	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	11.6820441749944	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85863340	85783129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_85785043_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802
ES.1251.1	chr1	+	4148	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	-36	1	-36	-1	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCATTTTGCTCTTTC	58	False	NA	NA	False	NA	NA	NA	128171862	128207114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.12	chr1	+	1689	11	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	130	6095	130	117	5prime_fragment	FALSE	canonical	3	326	junction_2	38.7509999870971	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTATAGCTTGCTGTTTT	224	False	NA	NA	False	CATAAA	-18	NA	128172028	128201020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557
ES.1251.13	chr1	+	4036	12	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	134	566	intron_retention	FALSE	canonical	3	326	junction_2	39.814238077841	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAGAATGATCTTA	228	False	NA	8	True	AATAAA	-11	NA	128172032	128205323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128202742_128204693
ES.1251.14	chr1	+	4141	12	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	138	1786	138	572	intron_retention	FALSE	canonical	3	326	junction_2	38.1176950731016	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	232	False	NA	14	True	AATAAA	-17	NA	128172036	128205329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538
ES.1251.15	chr1	+	2077	12	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	141	566	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	111.657164185956	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAGAATGATCTTA	235	False	NA	8	True	AATAAA	-11	NA	128172039	128205323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.17	chr1	+	4185	12	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	142	723	intron_retention	FALSE	canonical	3	326	junction_2	39.814238077841	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCTAGGTTACTGATG	236	False	NA	3	True	AATAAA	-13	NA	128172040	128205480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128202742_128204693
ES.1251.18	chr1	+	2036	11	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	144	566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	119.490752780288	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAGAATGATCTTA	238	False	NA	8	True	AATAAA	-11	NA	128172042	128205323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128172290_128179939_128180043_128186561_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.20	chr1	+	2334	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	148	1631	148	727	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGGTTACTGATGCATC	242	False	NA	7	True	AATAAA	-17	NA	128172046	128205484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.21	chr1	+	6636	10	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	149	572	intron_retention	FALSE	canonical	3	326	junction_2	40.6833602652133	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGATCTTATTTTTG	243	False	NA	14	True	AATAAA	-17	NA	128172047	128205329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128179939_128180043_128183169_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557
ES.1251.22	chr1	+	5707	11	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	149	-3	intron_retention	FALSE	canonical	3	9	junction_1	115.81208917898	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCTGCATTTTGCTCTT	243	False	NA	NA	False	NA	NA	NA	128172047	128207112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128202742_128204693
ES.1251.23	chr1	+	5911	12	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	149	5	149	-5	intron_retention	FALSE	canonical	3	326	junction_2	38.1176950731016	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACCCTGCATTTTGCTC	243	False	NA	NA	False	NA	NA	NA	128172047	128207110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538
ES.1251.28	chr1	+	3142	12	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	6829	1792	6829	566	3prime_fragment	FALSE	canonical	3	326	junction_1	40.0030990535021	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAGAATGATCTTA	6923	False	NA	8	True	AATAAA	-11	NA	128178727	128205323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.29	chr1	+	3725	12	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	-7304	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	105.806231752605	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCTGCATTTTGCTCTT	1011	False	NA	NA	False	NA	NA	NA	128179936	128207112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188567_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.3	chr1	+	2352	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	-13	1774	-13	584	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGCTGTAAGCATCT	81	False	NA	26	True	AATAAA	-29	NA	128171885	128205341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.30	chr1	+	178	1	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGTTTTCAGTC	2533	False	NA	NA	False	NA	NA	NA	128181458	128181636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128181500_128181600
ES.1251.31	chr1	+	177	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTCAAAGCA	2445	False	NA	NA	False	NA	NA	NA	128200119	128200296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128200100_128200300
ES.1251.4	chr1	+	4100	13	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.19894560948	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCCTGCATTTTGCTCT	87	False	NA	NA	False	NA	NA	NA	128171891	128207111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186584_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ES.1251.5	chr1	+	4148	13	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	109	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.113646811848	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTACCCTGCATTTTGC	203	False	NA	NA	False	NA	NA	NA	128172007	128207108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202893_128204693
ES.1251.8	chr1	+	2072	12	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	116	565	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	111.60489636464	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACCAGAATGATCTT	210	False	NA	7	True	AATAAA	-10	NA	128172014	128205322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128202538_128202742_128204693
ES.12510.1	chr15	-	176	1	Intergenic	novelGene_10453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85921530	85921354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_85921400_85921500
ES.12511.1	chr15	+	4249	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTTGTTCTTAGCTG	NA	False	NA	NA	False	AATAAA	-28	NA	85942890	86021834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.10	chr15	+	3954	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	37	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	15.2696637080777	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTGAGGAATCCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	85942964	86021824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.11	chr15	+	4562	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	37	2	intron_retention	FALSE	canonical	3	47	junction_12	7.11983437465306	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTCTGAGGAATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	85942964	86021821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081
ES.12511.13	chr15	+	4190	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	44	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	15.084944665313	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGAGGAATCCTTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	85942971	86021826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013820_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.14	chr15	+	5146	18	NNC	ENSMUSG00000035900.19	novel	4861	18	NA	NA	48	-2	intron_retention	FALSE	canonical	0	0	junction_2	19.9702200433875	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85942975	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85945658_85945826_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014568_86014703_86014859_86016054_86016200_86017015_86017961_86019081_86019151_86019550
ES.12511.15	chr15	+	4214	18	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	51	-2	intron_retention	FALSE	canonical	0	0	junction_9	15.5996628479226	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85942978	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011847_86012865_86012915_86013850_86013923_86014347_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.16	chr15	+	5726	17	NIC	ENSMUSG00000035900.19	novel	4861	18	NA	NA	51	-2	intron_retention	FALSE	canonical	3	47	junction_12	7.06194688099535	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85942978	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86017961_86019081_86019151_86019550
ES.12511.17	chr15	+	4150	19	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	56	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.3060344752658	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCTGAGGAATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	85942983	86021822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85975513_85975725_85984980_85985108_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.18	chr15	+	4302	19	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	15.3659074288215	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85942984	86021819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86018919_86019151_86019550
ES.12511.19	chr15	+	3210	20	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	70	-982	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	18.5204835317361	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCTGTCTTTCTTATT	NA	False	NA	NA	False	AAGAAA	-25	NA	85942997	86020837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85945658_85945724_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.2	chr15	+	3876	17	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.1195484970889	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCTGAGGAATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	85942919	86021822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.21	chr15	+	3971	19	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-63	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.347376764159	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTCTGAGGAATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	85943009	86021821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85945658_85945724_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.22	chr15	+	4174	19	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	15.3630951099713	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85943021	86021819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019479
ES.12511.23	chr15	+	3900	18	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-51	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.1957548041841	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTCTGAGGAATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	85943021	86021821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85984980_85985108_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.24	chr15	+	4176	20	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5906869162471	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85943021	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002771_86004571_86004661_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.25	chr15	+	4166	20	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	18.5204835317361	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85943021	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85945658_85945724_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.26	chr15	+	5172	1	Intergenic	novelGene_10454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCACATGACATGTGACT	NA	False	NA	NA	False	NA	NA	NA	85945472	85950644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85945500_85950600
ES.12511.27	chr15	+	4132	19	NNC	ENSMUSG00000035900.19	novel	597	5	NA	NA	-103	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3302130480553	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGAGGAATCCTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	85951910	86021825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85952075_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.28	chr15	+	3503	1	Genic_Genomic	ENSMUSG00000035900.19	novel	NA	NA	NA	NA	-3012	-16211	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85955921	85959424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_85955900_85959400
ES.12511.29	chr15	+	4115	19	NNC	ENSMUSG00000035900.19	novel	4115	19	NA	NA	6875	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3302130480553	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85965808	86021819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85965962_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.3	chr15	+	3199	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	16	-982	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCTGTCTTTCTTATT	NA	False	NA	NA	False	AAGAAA	-25	NA	85942943	86020837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.30	chr15	+	3745	17	NNC	ENSMUSG00000035900.19	novel	4115	19	NA	NA	26047	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	15.189943219117	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85984980	86021819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016060_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.31	chr15	+	3711	17	NNC	ENSMUSG00000035900.19	novel	4115	19	NA	NA	26071	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.1709616287962	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85985004	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85985102_86002663_86002771_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.32	chr15	+	5037	1	Intergenic	novelGene_10455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTGTGTTGAGGGCAGT	NA	False	NA	NA	False	TTTAAA	-44	NA	85996731	86001768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_85996700_86001800
ES.12511.33	chr15	+	3409	14	NNC	ENSMUSG00000035900.19	novel	4115	19	NA	NA	50450	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	21.0676565817405	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGGAATCCTTTGTTCT	5065	False	NA	NA	False	AATAAA	-22	NA	86009383	86021828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013820_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016060_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.34	chr15	+	4071	5	ISM	ENSMUSG00000035900.19	ENSMUST00000123349.2	4861	18	71405	15	55544	-2	intron_retention	FALSE	canonical	3	53	junction_3	8.67467578644874	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	86014477	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_86014568_86014703_86014859_86016054_86016200_86017015_86017961_86019081
ES.12511.35	chr15	+	4117	3	ISM	ENSMUSG00000035900.19	ENSMUST00000138134.8	4292	19	73197	-4	57191	4	intron_retention	FALSE	canonical	3	53	junction_1	1.5	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTGAGGAATCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86016124	86021823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_86016200_86017015_86017110_86017875
ES.12511.4	chr15	+	4942	18	NIC	ENSMUSG00000035900.19	novel	4861	18	NA	NA	24	3	intron_retention	FALSE	canonical	3	47	junction_12	7.07106781186548	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCTGAGGAATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	85942951	86021822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017961_86019081_86019151_86019550
ES.12511.5	chr15	+	4981	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	35	3	intron_retention	FALSE	canonical	3	47	junction_12	6.93020069412854	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTCTGAGGAATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	85942962	86021822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86017110_86017875_86017961_86019081_86019151_86019550
ES.12511.6	chr15	+	5283	18	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	35	0	intron_retention	FALSE	canonical	3	47	junction_12	7.07106781186548	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAGTCTGAGGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	85942962	86021819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86019151_86019550
ES.12511.7	chr15	+	5184	2	NNC	ENSMUSG00000035900.19	novel	4861	18	NA	NA	37	-24991	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCACATGACATGTGACT	NA	False	NA	NA	False	NA	NA	NA	85942964	85950644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85945658
ES.12511.8	chr15	+	4418	20	NNC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8550775679524	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCTGAGTCTGAGGAA	NA	False	NA	NA	False	AATAAA	-11	NA	85942964	86021817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_85943163_85969466_85969632_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86018986_86019151_86019550
ES.12511.9	chr15	+	4065	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	37	-95	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTCACTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	85942964	86021724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ES.12512.1	chr15	-	4397	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	227	-106	227	105	multi-exon	TRUE	canonical	3	13	junction_10	4.62105687767059	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACCCTAAATACTCATG	NA	False	NA	92	True	AAAAAG	-45	NA	86070115	86023223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ES.12512.10	chr15	-	3928	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-199	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.05287569403825	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATGGCCTCCCCTCAT	NA	False	NA	-18	True	AATAAA	-13	NA	86070541	86023333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86070492
ES.12512.11	chr15	-	2776	3	NNC	ENSMUSG00000035891.17	novel	2162	8	NA	NA	8746	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	5.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTATGGCCTCCCCTC	6289	False	NA	-20	True	AATAAA	-11	NA	86027903	86023335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86027814
ES.12512.12	chr15	-	4612	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	6.55532014643238	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTATGGCCTCCCCTC	NA	False	NA	-20	True	AATAAA	-11	NA	86070365	86023335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049091_86049292_86050022_86050137_86069707
ES.12512.13	chr15	-	1551	3	NNC	ENSMUSG00000035891.17	novel	2162	8	NA	NA	8764	-21	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	5.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAGGCCTACACAGCT	6307	False	NA	NA	False	TATAAA	-14	NA	86027885	86024542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86027814
ES.12512.14	chr15	-	2625	11	NIC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	441	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.37902432574931	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCAGGCCTACACAG	NA	False	NA	NA	False	TATAAA	-12	NA	86069901	86024544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86069707
ES.12512.15	chr15	-	2017	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	216	2285	216	-1093	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	86070126	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ES.12512.16	chr15	-	1116	8	FSM	ENSMUSG00000035891.17	ENSMUST00000156546.2	2162	8	-47	1093	-47	-1093	multi-exon	FALSE	canonical	3	9	junction_7	5.62429133857986	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	86036696	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86036605
ES.12512.17	chr15	-	1750	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-6882	-1093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.05287569403825	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	8032	False	NA	NA	False	NA	NA	NA	86050551	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86050399
ES.12512.18	chr15	-	479	3	NNC	ENSMUSG00000035891.17	novel	2162	8	NA	NA	8764	-1093	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	6307	False	NA	NA	False	NA	NA	NA	86027885	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86027814
ES.12512.19	chr15	-	1676	12	NIC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	443	-1093	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	7.27954226151549	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	86069899	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86069707
ES.12512.2	chr15	-	3925	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-6619	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.05287569403825	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCCCTCATCCTC	8295	False	NA	-14	True	AATAAA	-17	NA	86050288	86023329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86050246
ES.12512.20	chr15	-	5011	10	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-229	-1093	intron_retention	FALSE	canonical	0	0	junction_9	9.32671723174814	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	86070571	86025614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86027092_86028722_86028929_86029688_86030592_86033478_86033632_86035735_86035811_86039174_86040853_86043294_86043421_86049091_86049292_86050022_86050137_86070492
ES.12512.21	chr15	-	179	1	Intergenic	novelGene_10456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCGACCTTTC	9133	False	NA	NA	False	NA	NA	NA	86042159	86041980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86042000_86042200
ES.12512.3	chr15	-	3394	8	FSM	ENSMUSG00000035891.17	ENSMUST00000156546.2	2162	8	-41	-1191	-41	-1	multi-exon	FALSE	canonical	3	9	junction_7	5.62429133857986	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCCTCCCCTCATCCT	NA	False	NA	-15	True	AATAAA	-16	NA	86036690	86023330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86036605
ES.12512.4	chr15	-	4122	14	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-6835	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.1612768805904	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	8079	False	NA	-16	True	AATAAA	-15	NA	86050504	86023331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86048913_86049050_86049168_86049292_86050022_86050137_86050399
ES.12512.5	chr15	-	4020	11	NIC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	259	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.37902432574931	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	NA	False	NA	-16	True	AATAAA	-15	NA	86070083	86023331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86069707
ES.12512.6	chr15	-	4045	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	471	2	471	-2	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	NA	False	NA	-16	True	AATAAA	-15	NA	86069871	86023331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ES.12512.7	chr15	-	4030	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-8842	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.05287569403825	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCCTCCCCTCATCC	6072	False	NA	-16	True	AATAAA	-15	NA	86052511	86023331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86052362
ES.12512.8	chr15	-	3968	12	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	-5872	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.64927264892094	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGGCCTCCCCTCATC	9042	False	NA	-17	True	AATAAA	-14	NA	86049541	86023332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049091_86049292_86049416
ES.12512.9	chr15	-	4281	13	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	216	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.02179147764696	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGGCCTCCCCTCATC	NA	False	NA	-17	True	AATAAA	-14	NA	86070126	86023332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033614_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ES.12513.1	chr15	-	245	1	Intergenic	novelGene_10457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATGGTGTCTCTTCACA	NA	False	NA	NA	False	AAAACA	-30	NA	86078650	86078405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86078400_86078600
ES.12514.1	chr15	-	173	1	Intergenic	novelGene_10458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGCTGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	86080494	86080321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86080300_86080500
ES.12515.1	chr15	+	3170	12	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.7510014987871	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86098615	86382704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86098838_86118937_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86381013
ES.12515.10	chr15	+	2481	9	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	48033	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.3968572051249	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTTTTATTGCAT	NA	False	NA	7	True	AATAAA	-16	NA	86167738	86382703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86167857_86176334_86176406_86183847_86183977_86185746_86185810_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ES.12515.11	chr15	+	197	1	Intergenic	novelGene_10461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGGAAAAGTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	86291111	86291308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_86291100_86291300
ES.12515.12	chr15	+	3845	1	Intergenic	novelGene_10462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86292476	86296321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_86292500_86296300
ES.12515.13	chr15	+	9245	1	Intergenic	novelGene_10463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCCAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	86299688	86308933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_86299700_86308900
ES.12515.2	chr15	+	3274	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	-40	-5	-40	5	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTATTGCATTTATTT	NA	False	NA	13	True	AATAAA	-22	NA	86098619	86382709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ES.12515.3	chr15	+	3145	12	NIC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-33	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	24.8173493033861	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTCTTTTTATTGCA	NA	False	NA	6	True	AATAAA	-15	NA	86098626	86382702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ES.12515.4	chr15	+	3358	14	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.2597440429882	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTTTTATTGCATTT	NA	False	NA	9	True	AATAAA	-18	NA	86098629	86382705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86378789_86378888_86381013
ES.12515.5	chr15	+	3157	12	NIC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	25.1159295538782	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTCTTTTTATTGCA	NA	False	NA	6	True	AATAAA	-15	NA	86098633	86382702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86381013
ES.12515.6	chr15	+	3240	13	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	24.5802257922908	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCTTTTTATTGC	NA	False	NA	5	True	AATAAA	-14	NA	86098636	86382701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185755_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ES.12515.7	chr15	+	5091	9	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-13	32763	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	27.7623846238035	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTATTCTTTTTCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86098646	86209126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86205176
ES.12515.8	chr15	+	2186	14	NNC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	22.9039672540879	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTGGTCTTTTTATT	NA	False	NA	3	True	AATAAA	-12	NA	86098646	86382699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013_86381139_86382189
ES.12515.9	chr15	+	2930	10	NIC	ENSMUSG00000051864.11	novel	3229	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.0942570562859	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86098651	86382704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ES.12516.1	chr15	-	5956	1	FSM	ENSMUSG00000088071.3	ENSMUST00000157446.3	104	1	-1725	-4127	-1725	4127	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGTTGAAATGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	86098583	86092627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_86092600_86098600
ES.12516.2	chr15	-	4325	2	Genic_Genomic	ENSMUSG00000088071.3	novel	104	1	NA	NA	-2000	2428	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGACATCAACATTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	86098858	86094326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_86096861_86097067
ES.12516.3	chr15	-	1673	1	Intergenic	novelGene_10459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	86098573	86096900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86096900_86098600
ES.12516.4	chr15	-	616	1	Intergenic	novelGene_10460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGTTCTGTAGAATATA	NA	False	NA	0	True	NA	NA	NA	86098590	86097974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86098000_86098600
ES.12517.1	chr15	-	727	1	Genic_Genomic	ENSMUSG00000115918.2	novel	NA	NA	NA	NA	5393	24	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACCTCCTACTCCTAT	NA	False	NA	NA	False	NA	NA	NA	86353903	86353176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_86353200_86353900
ES.12518.1	chr15	-	178	1	Intergenic	novelGene_10464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGGGGAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	86408392	86408214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_86408200_86408400
ES.12519.1	chr15	-	2247	2	Intergenic	novelGene_10465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTACAATTGTGTGTT	NA	False	NA	NA	False	AAAAAG	-15	NA	87114277	87110947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_87113056_87114138
ES.1252.1	chr1	-	217	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAACAACTATCTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	128176705	128176488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128176500_128176700
ES.12520.1	chr15	+	4949	1	Intergenic	novelGene_10466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGAAGCCCTTTGCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	87212263	87217212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87212300_87217200
ES.12521.1	chr15	+	2695	4	FSM	ENSMUSG00000054863.10	ENSMUST00000230414.2	2649	4	-46	0	-46	0	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATGGCTTTTGTTCCCT	NA	False	NA	NA	False	AATAAA	-19	NA	87428453	87643563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_87428805_87565680_87565831_87604702_87604831_87641497
ES.12521.2	chr15	+	2177	5	NNC	ENSMUSG00000054863.10	novel	2603	4	NA	NA	-968	-1099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.26917420765551	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGCCTAAAGTTATAT	NA	False	NA	-1	True	ATTAAA	-9	NA	87508462	87642464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_87509107_87509399_87509688_87565680_87565831_87604702_87604831_87641497
ES.12521.3	chr15	+	2413	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	-945	1135	-945	-1133	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTGTTTGAAAGAGATC	NA	False	NA	-35	True	ATTAAA	-13	NA	87508485	87642430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ES.12521.4	chr15	+	3547	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	-942	-2	-942	2	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTTTTGTTCCCTGGCC	NA	False	NA	NA	False	AATAAA	-23	NA	87508488	87643567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ES.12521.5	chr15	+	1014	1	NIC	ENSMUSG00000054863.10	novel	2649	4	NA	NA	131985	-1134	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCTGTTTGAAAGAGAT	9334	False	NA	-36	True	ATTAAA	-12	NA	87641415	87642429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_87641400_87642400
ES.12522.1	chr15	+	3538	5	Intergenic	novelGene_10467	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGGTGGTGTTTTATCA	NA	False	NA	NA	False	NA	NA	NA	87784470	87796010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87784507_87784619_87785451_87790703_87790833_87791516_87791647_87793598
ES.12522.2	chr15	+	3246	4	Intergenic	novelGene_10468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAATGCATTTAAATAAT	NA	False	NA	NA	False	AATATA	-18	NA	87785302	87799712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87785451_87791516_87791647_87793598_87793787_87796932
ES.12522.3	chr15	+	2844	4	Intergenic	novelGene_10469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTAAGTTAGGACACAC	NA	False	NA	NA	False	NA	NA	NA	87785314	87799761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87785451_87791516_87791647_87796932_87797140_87797390
ES.12522.4	chr15	+	4399	3	Intergenic	novelGene_10470	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTAGTGTCCTTACCC	NA	False	NA	NA	False	NA	NA	NA	87797323	87802080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87798544_87798677_87800230_87800453
ES.12523.1	chr15	+	1606	6	Intergenic	novelGene_10471	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGTGCATTTGCG	NA	False	NA	NA	False	AATAGA	-14	NA	87806655	87817717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87806772_87807843_87807933_87808084_87808345_87808650_87808862_87809621_87809745_87816910
ES.12523.2	chr15	+	2106	5	Intergenic	novelGene_10472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	87807212	87811694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_87808345_87808650_87808862_87809621_87809745_87810563_87810659_87811149
ES.12524.1	chr15	+	180	1	Intergenic	novelGene_10473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAATAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88265365	88265545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88265400_88265500
ES.12525.1	chr15	-	817	3	Intergenic	novelGene_10475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCATAGATCTTCATA	NA	False	NA	NA	False	NA	NA	NA	88546810	88540204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88540776_88546368_88546528_88546723
ES.12525.2	chr15	-	879	3	Intergenic	novelGene_10474	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCATAGATCTTCATA	NA	False	NA	NA	False	NA	NA	NA	88546456	88540204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88540776_88543660_88543881_88546368
ES.12526.1	chr15	+	1805	1	Intergenic	novelGene_10476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGCAGCTTACACCGC	NA	False	NA	NA	False	NA	NA	NA	88568559	88570364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88568600_88570400
ES.12527.1	chr15	+	2787	1	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCACTGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	88571969	88574756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88572000_88574800
ES.12527.10	chr15	+	2431	1	Intergenic	novelGene_10479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAGTCTGGCACAGAA	NA	False	NA	20	True	AATAAA	-32	NA	88592679	88595110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88592700_88595100
ES.12527.11	chr15	+	135	1	Intergenic	novelGene_10480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	88592686	88592821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88592700_88592800
ES.12527.12	chr15	+	201	1	Intergenic	novelGene_10481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCACCAAGAAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	88593742	88593943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88593700_88593900
ES.12527.13	chr15	+	1476	1	Intergenic	novelGene_10483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	8767	False	NA	NA	False	AAAACA	-11	NA	88609073	88610549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88609100_88610500
ES.12527.14	chr15	+	186	1	Intergenic	novelGene_10484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTTCAACCCTGC	NA	False	NA	NA	False	NA	NA	NA	88611280	88611466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88611300_88611500
ES.12527.15	chr15	+	178	2	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	88611280	88629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88611443_88628997
ES.12527.2	chr15	+	1759	2	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCACTGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	88571969	88574756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88572683_88573710
ES.12527.3	chr15	+	1561	3	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCACTGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	88571969	88574756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88572683_88573710_88573870_88574067
ES.12527.4	chr15	+	4416	13	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCGAGCGCTCCGCCCGG	NA	False	NA	NA	False	NA	NA	NA	88571969	88618434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88572683_88573710_88573870_88574067_88574179_88575413_88575544_88575957_88576086_88584973_88585473_88591235_88591498_88596819_88597128_88597496_88597626_88598084_88598221_88601108_88601266_88613526_88614906_88618129
ES.12527.5	chr15	+	2319	2	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATTACTTTCCTTTTT	NA	False	NA	-1	True	AATAAA	-11	NA	88592664	88595089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88594893_88594998
ES.12527.6	chr15	+	2961	1	Intergenic	novelGene_10477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCCTGGCTGCTTTT	NA	False	NA	20	True	NA	NA	NA	88592673	88595634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88592700_88595600
ES.12527.7	chr15	+	4496	1	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACCTGAAACTAATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	88592673	88597169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88592700_88597200
ES.12527.8	chr15	+	2249	1	Intergenic	novelGene_10478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88592675	88594924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88592700_88594900
ES.12527.9	chr15	+	2851	2	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCCTGGCTGCTTTT	NA	False	NA	20	True	NA	NA	NA	88592677	88595634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88594893_88594998
ES.12528.1	chr15	-	5648	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	34	926	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATTTATTATATG	NA	False	NA	NA	False	ATTAAA	-17	NA	88618399	88570310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.10	chr15	-	5060	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	235.09356062751	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618426	88571236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.101	chr15	-	4500	7	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	-54	1998	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	284.417191619791	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGTAATAATGAAAAGT	NA	False	NA	7	True	AATAAA	-28	NA	88618490	88595104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88617171_88617487_88618131
ES.12528.102	chr15	-	4187	6	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	-76	1993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.380025541947	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAGTAATAATGA	NA	False	NA	2	True	AATAAA	-23	NA	88618512	88595109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597515_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.105	chr15	-	3975	5	NIC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	7	1981	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	281.276887603656	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTTTTGCCAAAAAGGA	NA	False	NA	-10	True	AATAAA	-11	NA	88618426	88595121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88597132_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.106	chr15	-	3852	7	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	-76	1733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	275.676591921283	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATCCATGTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	88618512	88595369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.107	chr15	-	3940	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-79	12318	-76	1731	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATCCATGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	88618512	88595371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.108	chr15	-	3697	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-28	12510	-25	1539	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATTAGAATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	88618461	88595563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.109	chr15	-	3167	6	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	11	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	274.000437955854	937	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCTTTTCTCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	88618422	88596048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597500_88597624_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.110	chr15	-	3148	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	7	13024	7	1025	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAAGATCCTATGTT	NA	False	NA	NA	False	NA	NA	NA	88618426	88596077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.111	chr15	-	3124	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-85	13140	-82	909	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGCCTCCAATCATTT	NA	False	NA	-1	True	NA	NA	NA	88618518	88596193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.112	chr15	-	3400	7	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	-46	902	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	284.417191619791	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCACATCTGGCCTCCA	NA	False	NA	-8	True	NA	NA	NA	88618482	88596200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88617171_88617491_88618131
ES.12528.113	chr15	-	2893	6	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	6	775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	274.000437955854	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAAGGTCTCAGTGGG	NA	False	NA	NA	False	NA	NA	NA	88618427	88596327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597500_88597624_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.114	chr15	-	2226	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	24	13929	24	120	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTGTTTTATAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	88618409	88596982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.115	chr15	-	179	1	Intergenic	novelGene_10482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	876	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCGGTTA	NA	False	NA	NA	False	NA	NA	NA	88604791	88604612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88604600_88604800
ES.12528.12	chr15	-	4725	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-72	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	224.227710409981	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618508	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.14	chr15	-	2473	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7505	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	7637	False	NA	-6	True	NA	NA	NA	88592572	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
ES.12528.17	chr15	-	5639	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	240.145739773499	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618490	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88617056_88617491_88618131
ES.12528.18	chr15	-	4222	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	27752	-1261	-2155	-1	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88587222	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
ES.12528.19	chr15	-	3713	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-6186	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	284.441737515464	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	8956	False	NA	-6	True	NA	NA	NA	88591253	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88579654_88580878_88584975_88585474_88591236
ES.12528.2	chr15	-	5242	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	-82	-8	-82	8	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTTTGGCAGATGGTC	NA	False	NA	3	True	NA	NA	NA	88618518	88571228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.20	chr15	-	5007	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	254.273975148598	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618415	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585441_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.21	chr15	-	5108	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	248.776617783013	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618315	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596740_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.22	chr15	-	4735	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	230.424742877534	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	False	NA	-6	True	NA	NA	NA	88618491	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131_88618300_88618377
ES.12528.23	chr15	-	2497	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7492	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	271.538466683615	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	7650	False	NA	-6	True	NA	NA	NA	88592559	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88592298
ES.12528.24	chr15	-	2861	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7500	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	244.623158748141	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	7642	False	NA	-6	True	NA	NA	NA	88592567	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592440
ES.12528.25	chr15	-	2373	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7495	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	232.867659709921	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	7647	False	NA	-6	True	NA	NA	NA	88592562	88571237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592530
ES.12528.27	chr15	-	3396	7	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	22421	-1260	-7486	-2	3prime_fragment	FALSE	canonical	3	347	junction_6	115.862945855102	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	7656	False	NA	-7	True	NA	NA	NA	88592553	88571238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236
ES.12528.28	chr15	-	4562	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	246.807223467133	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	NA	False	NA	-7	True	NA	NA	NA	88618436	88571238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.3	chr15	-	4863	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-99	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCGTGTTTGGCAGATG	NA	False	NA	0	True	NA	NA	NA	88618535	88571231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.30	chr15	-	2881	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7492	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	250.401229050906	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	7650	False	NA	-7	True	NA	NA	NA	88592559	88571238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592411
ES.12528.31	chr15	-	2601	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7492	-2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	224.216549845211	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	7650	False	NA	-7	True	NA	NA	NA	88592559	88571238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592298
ES.12528.34	chr15	-	4779	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	235.458580339633	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTCCCGTGTTTG	NA	False	NA	-7	True	NA	NA	NA	88618434	88571238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585105_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.35	chr15	-	2101	6	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	7992	-3	at_least_one_novel_splicesite	TRUE	canonical	2	47	junction_5	235.264446952785	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTTTGTCCCGTGTTT	NA	False	NA	-8	True	NA	NA	NA	88577075	88571239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88576947
ES.12528.38	chr15	-	5106	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	233.478883175522	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTTTGTCCCGTGTTT	NA	False	NA	-8	True	NA	NA	NA	88618426	88571239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585441_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.4	chr15	-	4673	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	220.32512286009	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCGTGTTTGGCAGATG	NA	False	NA	0	True	NA	NA	NA	88618435	88571231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.40	chr15	-	2987	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7486	-3	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTTTGTCCCGTGTTT	7656	False	NA	-8	True	NA	NA	NA	88592553	88571239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
ES.12528.42	chr15	-	5145	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	240.564036288793	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGTTTTTGTCCCGTGTT	NA	False	NA	-9	True	NA	NA	NA	88618426	88571240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598081_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.43	chr15	-	4968	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	-76	260	-76	-260	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTCATTCCTGCATCA	NA	False	NA	0	True	AATAAA	-21	NA	88618512	88571496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.44	chr15	-	4591	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-94	-262	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618530	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.45	chr15	-	3550	6	ISM	ENSMUSG00000022387.18	ENSMUST00000109380.8	3259	12	28163	-1000	-1744	-262	3prime_fragment	FALSE	canonical	3	571	junction_1	43.1212244724103	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88586811	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975
ES.12528.46	chr15	-	2231	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7524	-262	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	7618	False	NA	-2	True	AATAAA	-19	NA	88592591	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
ES.12528.48	chr15	-	4630	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-55	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	238.699369267891	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618491	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596740_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.49	chr15	-	1865	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-5545	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.519782948635	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	9597	False	NA	-2	True	AATAAA	-19	NA	88590612	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88590566
ES.12528.5	chr15	-	5118	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	230.695603639214	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618492	88571236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.50	chr15	-	4866	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-66	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	230.695603639214	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618502	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.51	chr15	-	4450	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	29	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	238.619103151631	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618404	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597515_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.53	chr15	-	3059	12	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-524	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	195.379731982162	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88601767	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88601519
ES.12528.54	chr15	-	4468	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-76	-262	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	224.227710409981	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618512	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.55	chr15	-	4349	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	16	-262	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	239.230757579164	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618417	88571498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.57	chr15	-	4481	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-76	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	220.32512286009	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	NA	False	NA	-4	True	AATAAA	-17	NA	88618512	88571500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.59	chr15	-	4216	12	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-17221	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	224.227710409981	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	NA	False	NA	-4	True	AATAAA	-17	NA	88635657	88571500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88635526
ES.12528.6	chr15	-	4721	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	227.860459248394	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618404	88571236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597624_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.60	chr15	-	2816	11	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-388	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	234.198398798967	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	NA	False	NA	-4	True	AATAAA	-17	NA	88601631	88571500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88601519
ES.12528.61	chr15	-	4474	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	6	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	256.884128784364	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	NA	False	NA	-4	True	AATAAA	-17	NA	88618427	88571500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596740_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.62	chr15	-	4831	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-66	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	254.273975148598	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTCTCATTCCTGC	NA	False	NA	-4	True	AATAAA	-17	NA	88618502	88571500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585441_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.64	chr15	-	4814	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	33	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	269.611757903842	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCCTCTCATTCCTG	NA	False	NA	-5	True	AATAAA	-16	NA	88618400	88571501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572680_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585441_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.65	chr15	-	4282	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	14	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	246.807223467133	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCCTCTCATTCCTG	NA	False	NA	-5	True	AATAAA	-16	NA	88618419	88571501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.66	chr15	-	4449	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-76	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	236.571151500394	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCCCTCTCATTCCTG	NA	False	NA	-5	True	AATAAA	-16	NA	88618512	88571501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597011_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.68	chr15	-	2762	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7524	-266	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCCCTCTCATTCCT	7618	False	NA	-6	True	AATAAA	-15	NA	88592591	88571502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
ES.12528.7	chr15	-	5531	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	268.960149706564	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618418	88571236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596740_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88617171_88617491_88618131
ES.12528.70	chr15	-	5334	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-3614	-266	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	229.394613905577	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCCCTCTCATTCCT	NA	False	NA	-6	True	AATAAA	-15	NA	88588681	88571502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162
ES.12528.71	chr15	-	1757	6	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-5546	-266	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	253.060783212255	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCCCTCTCATTCCT	9596	False	NA	-6	True	AATAAA	-15	NA	88590613	88571502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88590566
ES.12528.73	chr15	-	3300	12	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-376	-268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	258.770615420219	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCCCTCTCATTC	NA	False	NA	-8	True	AATAAA	-13	NA	88601619	88571504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598223_88601108_88601266_88601519
ES.12528.74	chr15	-	3428	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-408	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	296.986905809368	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCCCTCTCATTC	NA	False	NA	-8	True	AATAAA	-13	NA	88585475	88571504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88579657_88580878_88584975
ES.12528.75	chr15	-	3196	7	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7524	-268	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	237.843611083698	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCCCTCTCATTC	7618	False	NA	-8	True	AATAAA	-13	NA	88592591	88571504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585109_88591236
ES.12528.76	chr15	-	5194	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	6	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	236.601405008658	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCCCTCTCATTC	NA	False	NA	-8	True	AATAAA	-13	NA	88618427	88571504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88617171_88617491_88618131
ES.12528.77	chr15	-	1822	6	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	8006	-268	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_5	235.264446952785	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCCCTCTCATTC	NA	False	NA	-8	True	AATAAA	-13	NA	88577061	88571504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88576947
ES.12528.79	chr15	-	2247	7	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-6217	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	264.488605089562	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTGGCCCTCTCATT	8925	False	NA	-9	True	AATAAA	-12	NA	88591284	88571505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574070_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236
ES.12528.80	chr15	-	4594	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-76	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	233.657914125187	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTGGCCCTCTCATT	NA	False	NA	-9	True	AATAAA	-12	NA	88618512	88571505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585109_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.81	chr15	-	2102	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7493	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	232.867659709921	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTGGCCCTCTCAT	7649	False	NA	-10	True	AATAAA	-11	NA	88592560	88571506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592530
ES.12528.83	chr15	-	4353	12	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	22	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	255.942917189564	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTGGCCCTCTCAT	NA	False	NA	-10	True	AATAAA	-11	NA	88618411	88571506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575533_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.84	chr15	-	4757	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	6	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	258.134614668279	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAGTGTGGCCCTCTCA	NA	False	NA	-11	True	AATAAA	-10	NA	88618427	88571507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162_88585441_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.85	chr15	-	4416	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	-273	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	262.426253377093	1146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACAGTGTGGCCCTCT	NA	False	NA	-13	True	AATAAA	-8	NA	88618426	88571509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572680_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614050_88614105_88614908_88618131
ES.12528.87	chr15	-	2824	9	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	3683	-278	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	223.142191214481	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGGACAGTGTGGC	2649	False	NA	-18	True	AATAAA	-3	NA	88597560	88571514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575533_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500
ES.12528.88	chr15	-	7612	5	NIC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-15	-289	intron_retention	FALSE	canonical	2	4	junction_4	279.48736554628	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGTGAAGATTTG	NA	False	NA	-29	True	NA	NA	NA	88585082	88571525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88573867_88574064_88574175_88575410_88575539_88575951_88580878_88584975
ES.12528.89	chr15	-	3218	10	NIC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	3	-289	intron_retention	FALSE	canonical	3	347	junction_6	97.2316820794539	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGTGAAGATTTG	NA	False	NA	-29	True	NA	NA	NA	88601240	88571525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88598221_88601108
ES.12528.9	chr15	-	4621	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	236.571151500394	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618419	88571236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597011_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.91	chr15	-	4545	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	10	597	7	-597	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGATATGCATTTTTATA	NA	False	NA	NA	False	AATAAA	-13	NA	88618426	88571833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.92	chr15	-	4150	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	7	-599	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGATATGCATTTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	88618426	88571835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.93	chr15	-	4232	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-85	12032	-82	2017	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTATTTCTTACTC	NA	False	NA	-9	True	AAAAAG	-19	NA	88618518	88595085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.96	chr15	-	4009	6	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	7	2007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	302.513735225361	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGAAAAGTACAAATTTA	NA	False	NA	16	True	AATAAA	-37	NA	88618426	88595095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597011_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12528.97	chr15	-	3584	7	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	12	2003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	289.671077833693	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATAATGAAAAGTACAAA	NA	False	NA	12	True	AATAAA	-33	NA	88618421	88595099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88613898_88614434_88614908_88618131
ES.12528.99	chr15	-	4053	7	NNC	ENSMUSG00000022387.18	novel	4702	8	NA	NA	-7	2003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	275.676591921283	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATAATGAAAAGTACAAA	NA	False	NA	12	True	AATAAA	-33	NA	88618443	88595099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ES.12529.1	chr15	+	5517	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-86	-6	-86	6	multi-exon	FALSE	canonical	3	163	junction_1	12	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGATGGCTTTTTATT	NA	False	NA	41	True	ATTAAA	-28	NA	88635776	88668725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88636006_88638962_88639137_88663611
ES.12529.11	chr15	+	4790	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-49	-883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.1526453879229	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTTTTGTGGCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	88635913	88667836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636006_88636436_88636736_88638962_88639137_88663611
ES.12529.12	chr15	+	503	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	58	4864	-42	-4864	multi-exon	FALSE	canonical	3	163	junction_1	12	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTGGACATTATAAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	88635920	88663855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88636006_88638962_88639137_88663611
ES.12529.13	chr15	+	4562	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	2	-886	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.1619208787376	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACAGCTTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-13	NA	88635964	88667833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636006_88638962_88639137_88654740_88654866_88663611
ES.12529.15	chr15	+	5933	3	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGACTGATGATGGCT	NA	False	NA	34	True	ATTAAA	-21	NA	88635986	88668718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636639_88638962_88639137_88663611
ES.12529.16	chr15	+	5526	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	69	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.40870359029762	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTATTGCTGACTGA	NA	False	NA	26	True	ATTAAA	-13	NA	88636031	88668710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636236_88638962_88639137_88654740_88654790_88663611
ES.12529.17	chr15	+	4981	3	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	91	-886	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACAGCTTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-13	NA	88636053	88667833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636639_88638962_88639137_88663611
ES.12529.18	chr15	+	5935	3	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	118	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	33	True	ATTAAA	-20	NA	88636080	88668717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636736_88638962_88639137_88663611
ES.12529.19	chr15	+	6831	2	ISM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	1549	2	1449	-2	3prime_fragment	FALSE	canonical	3	187	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGACTGATGATGGC	NA	False	NA	33	True	ATTAAA	-20	NA	88637411	88668717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88639137_88663611
ES.12529.2	chr15	+	5297	2	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635816	88668719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88636006_88663611
ES.12529.20	chr15	+	281	1	Intergenic	novelGene_10485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGTGTTTAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	88638572	88638853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88638600_88638900
ES.12529.21	chr15	+	290	1	Intergenic	novelGene_10486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAAATGGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	88647941	88648231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88647900_88648200
ES.12529.22	chr15	+	160	1	Intergenic	novelGene_10488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	88651547	88651707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88651500_88651700
ES.12529.23	chr15	+	4230	1	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	27647	-880	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTTTGTGGCTGTTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	88663609	88667839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88663600_88667800
ES.12529.24	chr15	+	3840	1	ISM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	28560	457	28460	-457	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTATGCACTGACCCC	NA	False	NA	NA	False	AATAAA	-11	NA	88664422	88668262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88664400_88668300
ES.12529.3	chr15	+	5785	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-35	-325	-35	325	multi-exon	FALSE	canonical	3	163	junction_1	12	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88635827	88669044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88636006_88638962_88639137_88663611
ES.12529.4	chr15	+	5491	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.0414589439778	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635843	88668719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636006_88638962_88639137_88654740_88654788_88663611
ES.12529.5	chr15	+	4564	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	-18	879	-18	-879	multi-exon	FALSE	canonical	3	163	junction_1	12	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTGTGGCTGTTAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	88635844	88667840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88636006_88638962_88639137_88663611
ES.12529.6	chr15	+	4373	2	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	-1	-879	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTGTGGCTGTTAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	88635861	88667840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88636006_88663611
ES.12529.7	chr15	+	4589	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	0	-883	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.0414589439778	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTTTTGTGGCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	88635862	88667836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636006_88638962_88639137_88654740_88654788_88663611
ES.12529.8	chr15	+	5569	2	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	7	325	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88635869	88669044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88636006_88663611
ES.12529.9	chr15	+	5537	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.1619208787376	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635875	88668719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88636006_88638962_88639137_88654740_88654866_88663611
ES.1253.1	chr1	-	206	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAACTTGGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	128190381	128190175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128190200_128190400
ES.12530.1	chr15	-	5753	1	Antisense	novelGene_ENSMUSG00000034333.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAACTAAAATTTCCCT	NA	False	NA	NA	False	NA	NA	NA	88642585	88636832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_88636800_88642600
ES.12531.1	chr15	-	376	1	Intergenic	novelGene_10487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	88651066	88650690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88650700_88651100
ES.12532.1	chr15	-	218	1	Intergenic	novelGene_10489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAATATACCTATAACCT	NA	False	NA	NA	False	AATGAA	-10	NA	88671077	88670859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88670900_88671100
ES.12533.1	chr15	-	220	1	Intergenic	novelGene_10490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCCCATGGCTGA	8897	False	NA	NA	False	NA	NA	NA	88679090	88678870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88678900_88679100
ES.12534.1	chr15	+	182	1	Intergenic	novelGene_10491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGCACTTATAATA	NA	False	NA	NA	False	NA	NA	NA	88679918	88680100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_88679900_88680100
ES.12535.1	chr15	-	3270	10	NNC	ENSMUSG00000035845.18	novel	2130	10	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.1691718917785	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTTGTTGTTGGTC	9144	False	NA	0	True	AATAAA	-17	NA	88703621	88689446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88697616_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ES.12535.2	chr15	-	2040	8	NIC	ENSMUSG00000035845.18	novel	2130	10	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.9273584517012	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	9294	False	NA	-2	True	AATAAA	-15	NA	88703471	88689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88690258_88690601_88690678_88690760_88690925_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703170
ES.12535.3	chr15	-	2948	9	NNC	ENSMUSG00000035845.18	novel	2130	10	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	20.0027341881054	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	9254	False	NA	-2	True	AATAAA	-15	NA	88703511	88689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88690258_88690597_88690678_88690760_88690925_88695208_88696363_88698657_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703459
ES.12535.4	chr15	-	3932	3	ISM	ENSMUSG00000035845.18	ENSMUST00000160222.2	2060	8	6567	2	6567	-1	3prime_fragment	FALSE	canonical	3	40	junction_2	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	NA	False	NA	-2	True	AATAAA	-15	NA	88693807	88689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88690258_88690601_88690678_88690760
ES.12535.5	chr15	-	2096	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	32	2	-1	-1	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	9276	False	NA	-2	True	AATAAA	-15	NA	88703489	88689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ES.12535.6	chr15	-	2368	10	NIC	ENSMUSG00000035845.18	novel	2130	10	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	17.9512371044518	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	9294	False	NA	-2	True	AATAAA	-15	NA	88703471	88689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703170
ES.12535.7	chr15	-	2186	11	NNC	ENSMUSG00000035845.18	novel	2130	10	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.0483595094171	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGTGTCTTGTTGTTG	9269	False	NA	-3	True	AATAAA	-14	NA	88703496	88689449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88700633_88700718_88703460
ES.12535.8	chr15	-	1461	7	ISM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	25	5646	-8	3718	5prime_fragment	FALSE	canonical	0	0	junction_2	14.8548533034381	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCCTGGAGGCCTCT	9269	False	NA	NA	False	GATAAA	-19	NA	88703496	88695092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ES.12536.1	chr15	+	1436	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	-66	-4	-66	4	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTGGTTTGTTTCATT	NA	False	NA	21	True	AATAAA	-30	NA	88703782	88710890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.12	chr15	+	3850	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	902	junction_1	113.887981026192	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGACGTGTTGGTTTGT	NA	False	NA	15	True	AATAAA	-24	NA	88703847	88710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88707366_88707944_88708947_88709352_88709494_88710589
ES.12536.13	chr15	+	1346	10	NNC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	334.712480263949	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGACGTGTTGGTTTGT	NA	False	NA	15	True	AATAAA	-24	NA	88703848	88710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708011_88708850_88708947_88709352_88709494_88710589
ES.12536.14	chr15	+	4925	5	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	902	junction_1	139.088775607523	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	17	True	AATAAA	-26	NA	88703848	88710886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88708947_88709352_88709494_88710589
ES.12536.16	chr15	+	3693	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	1	-4	intron_retention	FALSE	canonical	3	902	junction_1	114.437270541065	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGGACGTGTTGGTTT	NA	False	NA	13	True	AATAAA	-22	NA	88703849	88710882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88708947_88709352_88709494_88710589
ES.12536.17	chr15	+	4340	6	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	902	junction_1	124.708620391695	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGGACGTGTTGGTTT	NA	False	NA	13	True	AATAAA	-22	NA	88703850	88710882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88707366_88707944_88708947_88709352_88709494_88710589
ES.12536.18	chr15	+	3409	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	902	junction_1	118.534687843779	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGGACGTGTTGGTTT	NA	False	NA	13	True	AATAAA	-22	NA	88703850	88710882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88706339_88707269_88707366_88707944_88708947_88709352_88709494_88710589
ES.12536.19	chr15	+	2089	9	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	3	-6	intron_retention	FALSE	canonical	3	902	junction_1	104.314128956724	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACAGGACGTGTTGGT	NA	False	NA	11	True	AATAAA	-20	NA	88703851	88710880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.2	chr15	+	2638	8	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	902	junction_1	111.406591238708	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGACGTGTTGGTTTGT	NA	False	NA	15	True	AATAAA	-24	NA	88703801	88710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.20	chr15	+	2286	9	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	9	-2	intron_retention	FALSE	canonical	3	902	junction_1	102.143817115869	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGACGTGTTGGTTTGT	NA	False	NA	15	True	AATAAA	-24	NA	88703857	88710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.21	chr15	+	6081	2	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	543	-8	intron_retention	FALSE	canonical	3	1253	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGAACAGGACGTGTTG	NA	False	NA	9	True	AATAAA	-18	NA	88704391	88710878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88708947_88709352
ES.12536.3	chr15	+	3568	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-47	-3	intron_retention	FALSE	canonical	3	902	junction_1	116.760438505514	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGACGTGTTGGTTTG	NA	False	NA	14	True	AATAAA	-23	NA	88703801	88710883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.4	chr15	+	4181	5	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-46	0	intron_retention	FALSE	canonical	3	956	junction_4	114.578575658803	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	17	True	AATAAA	-26	NA	88703802	88710886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.5	chr15	+	3650	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-46	-4	intron_retention	FALSE	canonical	3	902	junction_1	116.084260584954	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGGACGTGTTGGTTT	NA	False	NA	13	True	AATAAA	-22	NA	88703802	88710882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88708029_88708850_88708947_88709352_88709494_88710589
ES.12536.7	chr15	+	4492	5	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-38	-8	intron_retention	FALSE	canonical	3	956	junction_4	116.34512237305	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGAACAGGACGTGTTG	NA	False	NA	9	True	AATAAA	-18	NA	88703810	88710878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704843_88705337_88707366_88707944_88708947_88709352_88709494_88710589
ES.12536.8	chr15	+	1404	10	NNC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	339.038655431122	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGACGTGTTGGTTTG	NA	False	NA	14	True	AATAAA	-23	NA	88703821	88710883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709508_88710589
ES.12536.9	chr15	+	3133	7	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	902	junction_1	114.346573577387	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGACGTGTTGGTTTGT	NA	False	NA	15	True	AATAAA	-24	NA	88703821	88710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88704038_88704133_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ES.12537.1	chr15	-	1380	2	Antisense	novelGene_ENSMUSG00000119353.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCGGATGCCCGTCACAA	NA	False	NA	NA	False	NA	NA	NA	88721696	88710653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_88711932_88721594
ES.12538.1	chr15	+	2743	7	NNC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	-7458	-1	intron_retention	TRUE	canonical	0	0	junction_1	401.810071219393	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTCTGTTTATTGGAC	NA	False	NA	29	True	ATTAAA	-19	NA	88738930	88749928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88738974_88746035_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748617_88748777
ES.12538.10	chr15	+	3088	3	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	276	-2	intron_retention	FALSE	canonical	3	855	junction_1	44.5	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746664	88749927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88747151_88747243_88748696_88748777
ES.12538.11	chr15	+	2226	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	280	-6	intron_retention	FALSE	canonical	3	800	junction_2	51.5770055354128	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746668	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ES.12538.12	chr15	+	2310	4	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	291	-6	intron_retention	FALSE	canonical	3	856	junction_2	36.1754981536767	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746679	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88746956_88747040_88747752_88748518_88748696_88748777
ES.12538.13	chr15	+	2311	4	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	292	-2	intron_retention	FALSE	canonical	3	800	junction_1	59.269628722381	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746680	88749927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88747295_88747381_88747752_88748518_88748696_88748777
ES.12538.14	chr15	+	3076	3	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	294	-4	intron_retention	FALSE	canonical	3	891	junction_1	26.5	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAACTTCTGTTTATTG	NA	False	NA	26	True	ATTAAA	-16	NA	88746682	88749925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88746956_88747040_88748696_88748777
ES.12538.15	chr15	+	2091	6	NNC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	322	-6	intron_retention	FALSE	canonical	0	0	junction_5	341.444343927382	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746710	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748785
ES.12538.2	chr15	+	5103	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	-2677	1	-2677	-1	multi-exon	FALSE	canonical	3	800	junction_3	47.4021096576935	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTCTGTTTATTGGAC	NA	False	NA	29	True	ATTAAA	-19	NA	88743711	88749928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ES.12538.3	chr15	+	3481	2	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	-31	6	-31	-6	intron_retention	FALSE	canonical	3	891	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746357	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88746956_88747040
ES.12538.4	chr15	+	3456	2	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	944	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746389	88749927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88748696_88748777
ES.12538.5	chr15	+	3269	4	ISM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	1	6	1	-6	intron_retention	FALSE	canonical	3	800	junction_3	37.4195433192633	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746389	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381
ES.12538.6	chr15	+	2956	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	234	-4	intron_retention	FALSE	canonical	3	800	junction_3	52.4809489243478	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAACTTCTGTTTATTG	NA	False	NA	26	True	ATTAAA	-16	NA	88746622	88749925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88748696_88748777
ES.12538.7	chr15	+	2053	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	258	-6	intron_retention	FALSE	canonical	2	3	junction_1	377.484685119807	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAACTTCTGTTTAT	NA	False	NA	24	True	ATTAAA	-14	NA	88746646	88749923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88746956_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ES.12538.8	chr15	+	2153	6	NNC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	270	-2	intron_retention	FALSE	canonical	0	0	junction_5	341.444343927382	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTGTTTATTGGA	NA	False	NA	28	True	ATTAAA	-18	NA	88746658	88749927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748779
ES.12538.9	chr15	+	2242	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	271	-1	intron_retention	FALSE	canonical	3	855	junction_2	36.2249913733599	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTCTGTTTATTGGAC	NA	False	NA	29	True	ATTAAA	-19	NA	88746659	88749928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88746956_88747040_88747151_88747243_88747752_88748518_88748696_88748777
ES.12539.1	chr15	-	3199	1	Antisense	novelGene_ENSMUSG00000035828.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCGGCTCCCAAGTGA	NA	False	NA	NA	False	NA	NA	NA	88748098	88744899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_88744900_88748100
ES.1254.1	chr1	-	178	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	128192916	128192738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128192700_128192900
ES.12540.1	chr15	-	182	1	Intergenic	novelGene_10492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	88756902	88756720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88756700_88756900
ES.12541.1	chr15	-	1206	2	NNC	ENSMUSG00000093394.2	novel	1234	2	NA	NA	312	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCCAATGTGTGACAG	NA	False	NA	-4	True	NA	NA	NA	88775374	88773983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88775099_88775283
ES.12541.2	chr15	-	1391	1	NIC	ENSMUSG00000093394.2	novel	1234	2	NA	NA	311	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTCCAATGTGTGACA	NA	False	NA	-5	True	NA	NA	NA	88775375	88773984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88774000_88775400
ES.12542.1	chr15	+	469	3	Antisense	novelGene_ENSMUSG00000022388.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGATGTGTAGTGCACT	NA	False	NA	NA	False	AATATA	-14	NA	88777384	88783669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_88777469_88781763_88781910_88783430
ES.12543.1	chr15	-	5592	1	Intergenic	novelGene_10493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTTGTATGAGTTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	88788261	88782669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88782700_88788300
ES.12543.2	chr15	-	3740	1	Intergenic	novelGene_10494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTACAATAGATAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88786609	88782869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88782900_88786600
ES.12544.1	chr15	-	428	1	Intergenic	novelGene_10495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTCTGTCTGTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	88803365	88802937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88802900_88803400
ES.12545.1	chr15	-	852	4	NNC	ENSMUSG00000022388.15	novel	2968	12	NA	NA	14398	-18818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGACAGGTGGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	88823864	88818689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88819232_88820205_88820330_88823149_88823242_88823770
ES.12546.1	chr15	-	2600	12	FSM	ENSMUSG00000035805.14	ENSMUST00000042594.13	2783	12	182	1	182	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCATAGCCTGTTAAATGC	NA	False	NA	-1	True	AATAAA	-18	NA	88863028	88840087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88841300_88842266_88842429_88847616_88847740_88848350_88848408_88849581_88849699_88850141_88850214_88850595_88850698_88858687_88858790_88858926_88858981_88860705_88860796_88862001_88862201_88862718
ES.12547.1	chr15	+	4357	29	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-29	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	20.0843882919352	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTCTGTCTCAGAAT	2878	False	NA	3	True	AATAAA	-18	NA	88867082	88939354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88890152_88891784_88891877_88894895_88894973_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.10	chr15	+	7972	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-3	43262	-3	-11735	intron_retention	FALSE	canonical	3	47	junction_4	7.60382678775509	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2904	False	NA	NA	False	AATAAA	-18	NA	88867108	88896089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
ES.12547.11	chr15	+	4116	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.9078840547798	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCTTTCTGTCTCAGA	2907	False	NA	1	True	AATAAA	-16	NA	88867111	88939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889406_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.12	chr15	+	2452	11	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	1	10867	intron_retention	FALSE	canonical	0	0	junction_9	18.538878067456	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTACTCGTAAGCCGTG	2908	False	NA	NA	False	AAAAAG	-21	NA	88867112	88890141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881607_88882970_88883166_88888121_88888237_88889406_88889633_88889899
ES.12547.14	chr15	+	1888	10	NIC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	6	10588	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	18.9879754022524	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTTTGACACATGG	2913	False	NA	NA	False	AATAAA	-11	NA	88867117	88889862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88889454
ES.12547.16	chr15	+	3695	24	NIC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	11	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	16.5157884020304	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCACCTGTGCCAGTGAT	2918	False	NA	20	True	AATAAA	-35	NA	88867122	88939371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.17	chr15	+	4013	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	17.6307189205961	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCTTTCTGTCTCAGA	2923	False	NA	1	True	AATAAA	-16	NA	88867127	88939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889949_88891801_88891877_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.19	chr15	+	4018	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	17.3959773348565	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTTCTGTCTCAGAA	2930	False	NA	2	True	AATAAA	-17	NA	88867134	88939353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938806_88939018
ES.12547.2	chr15	+	2040	11	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-27	49485	-27	10592	5prime_fragment	FALSE	canonical	3	47	junction_4	7.62954782408499	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTGACACATGGTAAT	2880	False	NA	NA	False	AATAAA	-15	NA	88867084	88889866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454
ES.12547.20	chr15	+	3873	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	16.6078798624441	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCCCTTTCTGTCTCAG	3035	False	NA	0	True	AATAAA	-15	NA	88867239	88939351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896209_88896274_88896333_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.21	chr15	+	7172	7	ISM	ENSMUSG00000015365.16	ENSMUST00000015509.11	4052	27	13060	43266	13060	-11735	intron_retention	FALSE	canonical	3	47	junction_4	6.44635986860457	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	3322	False	NA	NA	False	AATAAA	-18	NA	88880256	88896089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
ES.12547.22	chr15	+	2068	14	NNC	ENSMUSG00000015365.16	novel	4052	27	NA	NA	-8522	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.57931696988191	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCTTTCTGTCTCAGA	4868	False	NA	1	True	AATAAA	-16	NA	88896101	88939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.3	chr15	+	4108	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-21	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	15.8574756379344	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCACCTGTGCCAGTGAT	2886	False	NA	20	True	AATAAA	-35	NA	88867090	88939371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.4	chr15	+	3990	10	NIC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-19	10865	intron_retention	FALSE	canonical	3	47	junction_7	7.34846922834953	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAACTACTCGTAAGCCG	2888	False	NA	NA	False	AAAAAG	-19	NA	88867092	88890139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
ES.12547.5	chr15	+	4270	27	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-19	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	16.1553112888683	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACCCCTTTCTGTCTCA	2888	False	NA	-1	True	AATAAA	-14	NA	88867092	88939350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713
ES.12547.6	chr15	+	2476	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-10	43262	-10	-11735	5prime_fragment	FALSE	canonical	3	36	junction_13	10.1817797586303	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2897	False	NA	NA	False	AATAAA	-18	NA	88867101	88896089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
ES.12547.7	chr15	+	4074	28	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.8574756379344	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACCCCTTTCTGTCTCA	2898	False	NA	-1	True	AATAAA	-14	NA	88867102	88939350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896188_88896254_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12547.8	chr15	+	3915	9	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	-5	53762	-5	6315	5prime_fragment	FALSE	canonical	3	47	junction_4	7.24461006542105	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGTTGCTGGATATCT	2902	False	NA	NA	False	NA	NA	NA	88867106	88885589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970
ES.12547.9	chr15	+	8201	26	NNC	ENSMUSG00000015365.16	novel	4133	27	NA	NA	-5	-6	intron_retention	FALSE	non_canonical	0	0	junction_13	17.9066021344084	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCAGACCCCTTTCTG	2902	False	NA	-6	True	AATAAA	-9	NA	88867106	88939345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88896209_88896274_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906235_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ES.12548.1	chr15	-	2870	1	Intergenic	novelGene_10496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	ATTAAA	-19	NA	88918394	88915524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88915500_88918400
ES.12549.1	chr15	-	296	1	Intergenic	novelGene_10497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAGGAAAAAAGA	5401	False	NA	NA	False	NA	NA	NA	88949164	88948868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_88948900_88949200
ES.1255.1	chr1	+	169	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	128322845	128323014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128322800_128323000
ES.12550.1	chr15	+	5408	4	ISM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	-8	0	-8	0	intron_retention	FALSE	canonical	3	86	junction_1	8.05536398239638	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTTGTGAAGTGTATGG	NA	False	NA	9	True	AATAAA	-19	NA	88960207	88971280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153
ES.12550.10	chr15	+	1515	9	NNC	ENSMUSG00000015363.14	novel	1422	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	31.575059382367	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGCTTCCCAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	88960273	88970333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969103_88969246_88969476_88969841_88969958
ES.12550.11	chr15	+	1429	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	63	947	4	0	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGCTTCCCAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	88960278	88970333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.12	chr15	+	1611	11	NNC	ENSMUSG00000015363.14	novel	1941	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	36.8430454767246	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCCCAGGCTTCCCAG	NA	False	NA	NA	False	AATAAA	-14	NA	88960293	88970331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88960702_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.13	chr15	+	2800	7	NIC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	-3	2	intron_retention	FALSE	canonical	3	86	junction_1	6.80685928555405	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGCTTTGTGAAGTGT	NA	False	NA	5	True	AATAAA	-15	NA	88960293	88971276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969650_88969728
ES.12550.14	chr15	+	3244	7	NNC	ENSMUSG00000015363.14	novel	2396	10	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	35.3301885392963	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCCCGCTTTGTGAAG	NA	False	NA	2	True	AATAAA	-12	NA	88960297	88971273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88965182_88965647_88966343_88966995_88968900_88969012_88969105_88969650_88969728_88969841_88969958
ES.12550.15	chr15	+	2750	6	NIC	ENSMUSG00000015363.14	novel	2396	10	NA	NA	-1074	0	intron_retention	FALSE	canonical	3	86	junction_4	4.07921561087423	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	88965657	88971274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88966321_88966853_88966995_88968900_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.2	chr15	+	2641	11	NNC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	36.8430454767246	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCTTTGTGAAGTGTAT	NA	False	NA	7	True	AATAAA	-17	NA	88960210	88971278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88960702_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.3	chr15	+	2445	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	-5	-1	-5	1	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTGTGAAGTGTATGGA	NA	False	NA	10	True	AATAAA	-20	NA	88960210	88971281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.4	chr15	+	2848	9	NIC	ENSMUSG00000015363.14	novel	1941	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	40.2661070256363	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	88960217	88971274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969476_88969650_88969728_88969841_88969958
ES.12550.5	chr15	+	2448	10	NNC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.6066239905476	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	88960225	88971274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88965157_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.6	chr15	+	2885	7	NIC	ENSMUSG00000015363.14	novel	2396	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	5	junction_3	33.7856807275245	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTCCCGCTTTGTGA	NA	False	NA	0	True	AATAAA	-10	NA	88960225	88971271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969650_88969728
ES.12550.7	chr15	+	2324	10	NNC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.7910418219891	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTCCCGCTTTGTGA	NA	False	NA	0	True	AATAAA	-10	NA	88960228	88971271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969198_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.8	chr15	+	2152	11	NNC	ENSMUSG00000015363.14	novel	2439	10	NA	NA	15	-465	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	36.8430454767246	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGGACAAAGAAGTCAT	NA	False	NA	NA	False	AATACA	-13	NA	88960230	88970809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88960702_88960902_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ES.12550.9	chr15	+	2323	10	NNC	ENSMUSG00000015363.14	novel	2396	10	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.3611815109178	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCCCGCTTTGTGAAG	NA	False	NA	2	True	AATAAA	-12	NA	88960253	88971273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969198_88969246_88969476_88969650_88969728_88969841_88969958
ES.12551.1	chr15	+	4182	8	NIC	ENSMUSG00000035757.18	novel	2383	9	NA	NA	10	-3	intron_retention	TRUE	canonical	3	22	junction_2	3.614031611621	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTCTGGTCACTGCCT	NA	False	NA	NA	False	AATAAA	-15	NA	88973296	88984540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88982980_88983465_88983652_88983789_88983947_88984033
ES.12551.2	chr15	+	4261	7	NIC	ENSMUSG00000035757.18	novel	2383	9	NA	NA	11	-3	intron_retention	FALSE	canonical	1	2	junction_2	10.4788146064121	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTCTGGTCACTGCCT	NA	False	NA	NA	False	AATAAA	-15	NA	88973297	88984540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88973869_88976906_88977053_88978339_88978527_88979801_88979933_88980741_88982980_88983465_88983947_88984033
ES.12551.3	chr15	+	2372	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	11	0	11	0	multi-exon	FALSE	canonical	3	22	junction_2	3.38193731461717	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCACTGCCTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	88973297	88984543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ES.12551.4	chr15	+	3598	8	NIC	ENSMUSG00000035757.18	novel	2383	9	NA	NA	13	-1	intron_retention	FALSE	canonical	3	28	junction_7	2.1189138534559	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGGTCACTGCCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	88973299	88984542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_88973869_88976906_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ES.12551.5	chr15	+	1494	5	FSM	ENSMUSG00000035757.18	ENSMUST00000130700.8	2688	5	14	1180	14	-1180	multi-exon	FALSE	canonical	1	2	junction_2	12.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTTGTGACTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	88973300	88981203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_88973869_88976906_88977053_88978339_88978527_88979801_88979933_88980741
ES.12552.1	chr15	+	107	1	Antisense	novelGene_ENSMUSG00000051786.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCAAACCATCC	NA	False	NA	NA	False	NA	NA	NA	89004098	89004205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_89004100_89004200
ES.12553.1	chr15	-	5407	7	NIC	ENSMUSG00000051786.16	novel	5357	25	NA	NA	-1074	763	intron_retention	TRUE	canonical	3	58	junction_3	10.3668810267227	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACGAGGCTGAGGTAGT	NA	False	NA	NA	False	NA	NA	NA	88987880	88981796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985489_88985564_88985760_88985977_88986120_88986203_88986611_88986747
ES.12553.10	chr15	-	7904	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_20	22.4170926229667	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGATGAGTTTGCTTAA	NA	False	NA	NA	False	TATAAA	-13	NA	89007316	88982562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985571_88985760_88985977_88986120_88986203_88986370_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88993992_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.12	chr15	-	4935	11	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-1867	-4	intron_retention	FALSE	canonical	0	0	junction_9	23.4997872330794	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGATGAGTTTGCTTA	NA	False	NA	NA	False	TATAAA	-12	NA	88988673	88982563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986801_88987013_88988494_88988621
ES.12553.13	chr15	-	6981	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-84	738	-59	3	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGTTGTTACTTGAAA	NA	False	NA	1	True	ACTAAA	-20	NA	89007374	88983297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.14	chr15	-	8079	24	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-13	1	intron_retention	FALSE	canonical	2	2	junction_5	17.0207257180696	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGTTGTTACTTGA	NA	False	NA	-1	True	ACTAAA	-18	NA	89007328	88983299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.15	chr15	-	6237	26	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	451	1	intron_retention	FALSE	canonical	1	1	junction_18	22.0005818104886	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGTTGTTACTTGA	NA	False	NA	-1	True	ACTAAA	-18	NA	89006638	88983299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88992998_88993046_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.18	chr15	-	8340	21	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-51	1	intron_retention	FALSE	canonical	3	40	junction_18	13.110587324754	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGGGTTGTTACTTGA	NA	False	NA	-1	True	ACTAAA	-18	NA	89007366	88983299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.19	chr15	-	5073	14	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-32	0	intron_retention	FALSE	canonical	3	41	junction_12	14.2965216939079	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGGGTTGTTACTTG	NA	False	NA	-2	True	ACTAAA	-17	NA	88991664	88983300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986807_88987019_88988494_88988621_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615
ES.12553.2	chr15	-	2133	2	NNC	ENSMUSG00000051786.16	novel	1920	2	NA	NA	1056	762	intron_retention	FALSE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAACGAGGCTGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	88984245	88981797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88982015_88982329
ES.12553.21	chr15	-	5485	24	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	6783	0	intron_retention	FALSE	canonical	0	0	junction_1	20.5299357249253	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGGGTTGTTACTTG	NA	False	NA	-2	True	ACTAAA	-17	NA	89000306	88983300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984194_88984268_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985571_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247
ES.12553.22	chr15	-	7006	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	40	junction_21	13.3235156041088	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTGGGTTGTTACTT	NA	False	NA	-3	True	ACTAAA	-16	NA	89007319	88983301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.23	chr15	-	8095	20	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-29	-2	intron_retention	FALSE	canonical	1	1	junction_18	24.3431151995329	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCTGGGTTGTTACT	NA	False	NA	-4	True	ACTAAA	-15	NA	89007344	88983302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985571_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88994371_88995318_88995493_89004712_89004877_89006279
ES.12553.24	chr15	-	7152	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	40	junction_21	13.2951090400054	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCTGGGTTGTTACT	NA	False	NA	-4	True	ACTAAA	-15	NA	89007337	88983302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.25	chr15	-	6781	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	1	junction_23	17.6645919053729	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCTGGGTTGTTACT	NA	False	NA	-4	True	ACTAAA	-15	NA	89007343	88983302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89006279
ES.12553.26	chr15	-	6859	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-43	-4	intron_retention	FALSE	canonical	0	0	junction_9	20.5856948712773	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89007358	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986801_88987013_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994347_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.27	chr15	-	6562	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	384	-4	intron_retention	FALSE	canonical	1	1	junction_17	22.9101126991748	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89006705	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986370_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88992998_88993046_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.28	chr15	-	5600	19	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-2105	-4	intron_retention	FALSE	canonical	2	2	junction_1	20.7655935755087	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	88993737	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984704_88984787_88984988_88985068_88985283_88985355_88985489_88985571_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149
ES.12553.29	chr15	-	5241	20	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-2738	-4	intron_retention	FALSE	canonical	0	0	junction_13	22.3396099282228	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	88994370	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990378_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88994248
ES.12553.3	chr15	-	8010	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-76	-299	-51	299	multi-exon	TRUE	canonical	3	40	junction_22	13.0596920161065	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCAGCCTACACGATGA	NA	False	NA	NA	False	NA	NA	NA	89007366	88982260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.30	chr15	-	9349	21	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-28	-4	intron_retention	FALSE	canonical	3	40	junction_18	12.9092021442071	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89007343	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.31	chr15	-	8162	21	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-48	-4	intron_retention	FALSE	canonical	3	40	junction_18	12.5158899004426	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89007363	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.32	chr15	-	6874	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_2	16.8693920722974	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89007322	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984940_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.33	chr15	-	9093	21	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	11	-4	intron_retention	FALSE	canonical	2	2	junction_4	17.2292628977562	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCTGGGTTGTTA	NA	False	NA	-6	True	ACTAAA	-13	NA	89007304	88983304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.35	chr15	-	7337	15	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-2616	-5	intron_retention	FALSE	canonical	2	3	junction_7	20.7147783192659	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCAGCCTCTGGGTTGTT	NA	False	NA	-7	True	ACTAAA	-12	NA	88994248	88983305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986370_88986456_88986611_88986747_88988494_88988621_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153
ES.12553.36	chr15	-	7260	22	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	552	-5	intron_retention	FALSE	canonical	1	1	junction_7	17.9774360968626	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCAGCCTCTGGGTTGTT	NA	False	NA	-7	True	ACTAAA	-12	NA	89006537	88983305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986458_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.37	chr15	-	6870	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-32	-5	intron_retention	FALSE	canonical	1	2	junction_19	17.0658681681508	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCAGCCTCTGGGTTGTT	NA	False	NA	-7	True	ACTAAA	-12	NA	89007347	88983305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.38	chr15	-	6525	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-8	-5	intron_retention	FALSE	canonical	0	0	junction_9	17.4797005282	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCAGCCTCTGGGTTGTT	NA	False	NA	-7	True	ACTAAA	-12	NA	89007323	88983305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987416_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.39	chr15	-	7284	22	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-81	-6	intron_retention	FALSE	canonical	0	0	junction_2	20.4067482502642	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCAGCCTCTGGGTTGT	NA	False	NA	-8	True	ACTAAA	-11	NA	89007396	88983306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986370_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.4	chr15	-	7718	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-83	0	-58	0	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGAGTTTGCTTAATGG	NA	False	NA	NA	False	TATAAA	-16	NA	89007373	88982559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.40	chr15	-	6127	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	507	-6	intron_retention	FALSE	canonical	2	2	junction_5	16.7105671823417	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCAGCCTCTGGGTTGT	NA	False	NA	-8	True	ACTAAA	-11	NA	89006582	88983306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.41	chr15	-	4731	13	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	978	-6	intron_retention	FALSE	canonical	3	49	junction_11	11.8133634311129	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCAGCCTCTGGGTTGT	NA	False	NA	-8	True	ACTAAA	-11	NA	88990654	88983306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471
ES.12553.43	chr15	-	6607	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-53	1081	-28	-340	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCTTCCCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	89007343	88983640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.44	chr15	-	5882	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	-77	1830	-52	223	multi-exon	FALSE	canonical	3	40	junction_22	13.0596920161065	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGTGCTAAGGGCGT	NA	False	NA	NA	False	AAAACA	-24	NA	89007367	88984389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.45	chr15	-	5716	22	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-20	216	intron_retention	FALSE	canonical	1	1	junction_20	23.5819601292474	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAAGCACTGTGTGCTA	NA	False	NA	NA	False	AAAACA	-17	NA	89007335	88984396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88994248_88994371_88995318_88995493_89004712_89004877_89006279
ES.12553.46	chr15	-	6900	22	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-6	214	intron_retention	FALSE	canonical	2	2	junction_5	17.3413116123139	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATGAAGCACTGTGTGC	NA	False	NA	NA	False	AAAACA	-15	NA	89007321	88984398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985707_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.47	chr15	-	3310	16	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-52	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.5870566675468	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAAGAGACTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	89007367	88988012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990467_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.48	chr15	-	2188	3	ISM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	-278	14910	-52	3119	5prime_fragment	FALSE	canonical	3	50	junction_1	1	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCCTTTGTATAATA	NA	False	NA	NA	False	NA	NA	NA	89007367	88999522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89000459_89004712_89004877_89006279
ES.12553.5	chr15	-	7607	24	NIC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	2	junction_19	20.330538921889	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGAGTTTGCTTAAT	NA	False	NA	NA	False	TATAAA	-14	NA	89007343	88982561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986370_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.7	chr15	-	7857	25	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-48	-2	intron_retention	FALSE	canonical	1	1	junction_18	17.3384908192406	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGAGTTTGCTTAAT	NA	False	NA	NA	False	TATAAA	-14	NA	89007363	88982561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88992998_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.8	chr15	-	7726	26	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	1	junction_18	22.168951260716	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGAGTTTGCTTAAT	NA	False	NA	NA	False	TATAAA	-14	NA	89007343	88982561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985571_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88992998_88993046_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12553.9	chr15	-	7755	26	NNC	ENSMUSG00000051786.16	novel	7635	25	NA	NA	-51	-3	intron_retention	FALSE	canonical	1	1	junction_18	20.1229818863905	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGATGAGTTTGCTTAA	NA	False	NA	NA	False	TATAAA	-13	NA	89007366	88982562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88992998_88993046_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ES.12554.1	chr15	-	2531	19	NNC	ENSMUSG00000062906.13	novel	2650	19	NA	NA	52	1	intron_retention	FALSE	canonical	0	0	junction_18	11.4105485093378	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTGTCTCCGTTACT	NA	False	NA	-2	True	AATAAA	-18	NA	89012802	89007508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010765_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012729
ES.12554.2	chr15	-	2413	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	0	-1	0	1	multi-exon	FALSE	canonical	3	17	junction_4	5.98567079345711	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTGTCTCCGTTACT	NA	False	NA	-2	True	AATAAA	-18	NA	89012903	89007508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ES.12554.3	chr15	-	2674	19	NNC	ENSMUSG00000062906.13	novel	2412	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_5	11.5797023352433	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCTCTGTCTCCGTTA	NA	False	NA	-4	True	AATAAA	-16	NA	89012867	89007510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008792_89008915_89009027_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011586_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ES.12554.5	chr15	-	2290	19	NIC	ENSMUSG00000062906.13	novel	2412	20	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	8.66595438668464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCTCTGTCTCCGTT	NA	False	NA	-5	True	AATAAA	-15	NA	89012840	89007511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ES.12554.6	chr15	-	2601	19	NNC	ENSMUSG00000062906.13	novel	2412	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	8.97200722136618	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACATCTCTGTCTCCG	NA	False	NA	-7	True	AATAAA	-13	NA	89012881	89007513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89007683_89007767_89007928_89008021_89008142_89008377_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ES.12554.7	chr15	-	3091	17	NIC	ENSMUSG00000062906.13	novel	2895	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_11	8.86619281315267	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACATCTCTGTCTCCG	NA	False	NA	-7	True	AATAAA	-13	NA	89012901	89007513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010832_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89012523_89012592
ES.12554.8	chr15	-	2161	20	NNC	ENSMUSG00000062906.13	novel	2376	20	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	10.6156733547912	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAACACATCTCTGTC	NA	False	NA	-11	True	AATAAA	-9	NA	89012646	89007517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008460_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010832_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ES.12554.9	chr15	-	3711	10	NIC	ENSMUSG00000062906.13	novel	2895	18	NA	NA	-23	-5	intron_retention	FALSE	canonical	3	26	junction_1	3.92837100659193	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACACAACACATCTCTGT	NA	False	NA	-12	True	AATAAA	-8	NA	89012674	89007518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89008205_89008377_89008792_89008915_89009008_89009514_89009600_89009699_89010285_89010414_89010505_89010580_89010910_89011071_89011694_89011796_89012523_89012592
ES.12555.1	chr15	-	1904	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	-97	1	-15	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTTGTGTGGCCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	89024921	89014787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ES.12555.2	chr15	-	1997	11	FSM	ENSMUSG00000022610.11	ENSMUST00000230266.2	1928	11	-69	0	-18	0	multi-exon	FALSE	canonical	2	7	junction_5	1.79164728671689	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTTGTGTGGCCCCA	NA	False	NA	NA	False	AATAAA	-19	NA	89024924	89014787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330
ES.12555.3	chr15	-	2012	11	NIC	ENSMUSG00000022610.11	novel	1808	12	NA	NA	-56	-2	intron_retention	FALSE	canonical	2	7	junction_4	1.96214168703486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTGGTTGTGTGGCCC	NA	False	NA	NA	False	AATAAA	-17	NA	89024962	89014789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89015422_89016697_89016872_89016955_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ES.12556.2	chr15	-	3338	9	NIC	ENSMUSG00000053137.8	novel	2615	10	NA	NA	39	4	intron_retention	FALSE	canonical	2	7	junction_5	5.59994419615053	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGATCCCATTGCTT	NA	False	NA	-8	True	AATAAA	-33	NA	89033792	89026684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89028021_89028343_89028518_89028595_89029650_89030004_89030120_89030205_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ES.12556.3	chr15	-	3142	8	NIC	ENSMUSG00000053137.8	novel	2461	12	NA	NA	199	4	intron_retention	FALSE	canonical	2	7	junction_6	6.29544701043734	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGATCCCATTGCTT	NA	False	NA	-8	True	AATAAA	-33	NA	89030790	89026684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89028021_89028343_89028518_89028595_89029379_89029577_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673
ES.12556.4	chr15	-	2524	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	-58	-5	-58	4	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGATCCCATTGCTT	NA	False	NA	-8	True	AATAAA	-33	NA	89033889	89026684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ES.12556.5	chr15	-	2610	11	NIC	ENSMUSG00000053137.8	novel	2461	12	NA	NA	51	0	intron_retention	FALSE	canonical	2	7	junction_7	5.91692487699481	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTGGATCCCATT	NA	False	NA	-12	True	AATAAA	-29	NA	89033780	89026688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ES.12556.6	chr15	-	2444	8	ISM	ENSMUSG00000053137.8	ENSMUST00000230734.2	2615	10	2909	0	201	0	3prime_fragment	FALSE	canonical	2	7	junction_6	6.04405594323034	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCTGGATCCCATT	NA	False	NA	-12	True	AATAAA	-29	NA	89030788	89026688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029650_89030004_89030120_89030205_89030372_89030474_89030587_89030673
ES.12557.1	chr15	-	6741	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	-239	-5	-239	5	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGTTTCTCCTTGGGC	8904	False	NA	0	True	AATACA	-24	NA	89065230	89039746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.11	chr15	-	6758	36	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_31	88.7249176973874	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9173	False	NA	-5	True	AATACA	-19	NA	89064961	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050126_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.12	chr15	-	6636	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-189	0	intron_retention	FALSE	canonical	3	14	junction_36	72.4702312234496	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	8954	False	NA	-5	True	AATACA	-19	NA	89065180	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.14	chr15	-	6900	35	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	63	0	intron_retention	FALSE	canonical	0	0	junction_34	72.8211061081174	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9206	False	NA	-5	True	AATACA	-19	NA	89064928	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.15	chr15	-	8938	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3275	0	intron_retention	FALSE	canonical	0	0	junction_36	74.696975288722	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89058166	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89054821_89055269_89055320_89058142
ES.12557.16	chr15	-	5554	34	NIC	ENSMUSG00000036606.18	novel	6394	36	NA	NA	-1434	0	intron_retention	FALSE	canonical	3	244	junction_18	52.8783276875	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89051434	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050210_89050568_89050698_89050786_89050970_89051143
ES.12557.17	chr15	-	6504	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_37	86.6872163833578	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9176	False	NA	-5	True	AATACA	-19	NA	89064958	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040378_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.2	chr15	-	6428	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3263	0	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89058154	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89058099
ES.12557.20	chr15	-	6359	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_36	89.5514672005868	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9144	False	NA	-5	True	AATACA	-19	NA	89064990	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.23	chr15	-	5733	33	NIC	ENSMUSG00000036606.18	novel	6394	36	NA	NA	-803	0	intron_retention	FALSE	canonical	3	228	junction_30	55.0523099963798	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89050803	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786
ES.12557.24	chr15	-	4811	31	NNC	ENSMUSG00000036606.18	novel	6394	36	NA	NA	-211	0	intron_retention	FALSE	canonical	0	0	junction_11	93.4448441000834	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89050211	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043323_89043640_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048250_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108
ES.12557.25	chr15	-	6540	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3418	0	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89058309	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89058142
ES.12557.29	chr15	-	6620	36	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-310	0	intron_retention	FALSE	canonical	2	5	junction_20	89.0563041346453	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	8833	False	NA	-5	True	AATACA	-19	NA	89065301	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.3	chr15	-	6481	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	96	0	intron_retention	FALSE	non_canonical	0	0	junction_31	89.9827615521063	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9239	False	NA	-5	True	AATACA	-19	NA	89064895	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050563_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.30	chr15	-	6295	38	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	97.9785459738346	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9130	False	NA	-5	True	AATACA	-19	NA	89065004	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.31	chr15	-	6305	38	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	63	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_37	83.9711070696235	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGACTGGGTTTCTCC	9206	False	NA	-6	True	AATACA	-18	NA	89064928	89039752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.32	chr15	-	6472	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	18	-1	intron_retention	FALSE	non_canonical	0	0	junction_24	88.8045267635802	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGACTGGGTTTCTCC	9161	False	NA	-6	True	AATACA	-18	NA	89064973	89039752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047045_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.33	chr15	-	7014	34	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	99	-2	intron_retention	FALSE	non_canonical	0	0	junction_19	100.988593669896	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9242	False	NA	-7	True	AATACA	-17	NA	89064892	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041743_89041837_89041999_89042103_89042524_89042627_89042729_89042829_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046885_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050567_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.34	chr15	-	7050	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-380	-2	intron_retention	FALSE	canonical	0	0	junction_36	74.7891428956218	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	8763	False	NA	-7	True	AATACA	-17	NA	89065371	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.36	chr15	-	6359	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	31	-2	intron_retention	FALSE	canonical	0	0	junction_37	87.4662994686063	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9174	False	NA	-7	True	AATACA	-17	NA	89064960	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041894_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.37	chr15	-	6386	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	31	-2	intron_retention	FALSE	canonical	0	0	junction_37	87.8778702954004	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9174	False	NA	-7	True	AATACA	-17	NA	89064960	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042909_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.39	chr15	-	6393	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	95	-2	intron_retention	FALSE	canonical	0	0	junction_9	88.5317620965886	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9238	False	NA	-7	True	AATACA	-17	NA	89064896	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042836_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.41	chr15	-	6395	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	98	-2	intron_retention	FALSE	canonical	0	0	junction_18	88.4350425835639	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9241	False	NA	-7	True	AATACA	-17	NA	89064893	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045310_89045422_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.43	chr15	-	6572	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3262	-2	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	NA	False	NA	-7	True	AATACA	-17	NA	89058153	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89057952
ES.12557.44	chr15	-	6425	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	78	-2	intron_retention	FALSE	non_canonical	0	0	junction_36	88.4350425835639	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9221	False	NA	-7	True	AATACA	-17	NA	89064913	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054829_89055269_89055320_89064867
ES.12557.45	chr15	-	6541	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	38	-2	intron_retention	FALSE	canonical	1	6	junction_36	73.37706503288	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9181	False	NA	-7	True	AATACA	-17	NA	89064953	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054955_89064867
ES.12557.46	chr15	-	6598	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_36	84.929977512342	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9171	False	NA	-7	True	AATACA	-17	NA	89064963	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043323_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.47	chr15	-	6558	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	78	-2	intron_retention	FALSE	canonical	0	0	junction_36	73.1808810962583	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9221	False	NA	-7	True	AATACA	-17	NA	89064913	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.48	chr15	-	6356	36	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	40	-2	intron_retention	FALSE	canonical	0	0	junction_35	75.0320203755214	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9183	False	NA	-7	True	AATACA	-17	NA	89064951	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89064867
ES.12557.5	chr15	-	6391	39	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_38	84.6279007121609	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9171	False	NA	-5	True	AATACA	-19	NA	89064963	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.52	chr15	-	6409	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	63	-2	intron_retention	FALSE	non_canonical	0	0	junction_18	88.4350425835639	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9206	False	NA	-7	True	AATACA	-17	NA	89064928	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045449_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.53	chr15	-	6448	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_12	87.8676373568087	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9151	False	NA	-7	True	AATACA	-17	NA	89064983	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043702_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.54	chr15	-	6669	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	64	-2	intron_retention	FALSE	canonical	0	0	junction_29	89.5797243028401	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGACTGGGTTTCTC	9207	False	NA	-7	True	AATACA	-17	NA	89064927	89039753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049662_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.56	chr15	-	6565	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	102	-4	intron_retention	FALSE	canonical	0	0	junction_36	74.4292428508985	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTGACTGGGTTTC	9245	False	NA	-9	True	AATACA	-15	NA	89064889	89039755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.59	chr15	-	7777	33	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	96	-4	intron_retention	FALSE	canonical	0	0	junction_32	78.4947997879477	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTGACTGGGTTTC	9239	False	NA	-9	True	AATACA	-15	NA	89064895	89039755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.60	chr15	-	3224	15	NIC	ENSMUSG00000036606.18	novel	6394	36	NA	NA	773	-4	intron_retention	FALSE	canonical	3	301	junction_12	40.0464016575058	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTGACTGGGTTTC	NA	False	NA	-9	True	AATACA	-15	NA	89044977	89039755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89043309_89043429_89043497_89043663_89043846_89043975_89044465_89044570_89044711_89044809
ES.12557.62	chr15	-	6531	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3266	-5	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	NA	False	NA	-10	True	AATACA	-14	NA	89058157	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89057994
ES.12557.63	chr15	-	6412	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	4	-5	intron_retention	FALSE	canonical	0	0	junction_23	88.8725583570442	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	9147	False	NA	-10	True	AATACA	-14	NA	89064987	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046723_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.64	chr15	-	6364	39	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	95.639298127184	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	9207	False	NA	-10	True	AATACA	-14	NA	89064927	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043323_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.66	chr15	-	6429	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	62	-5	intron_retention	FALSE	canonical	0	0	junction_13	98.66256843666	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	9205	False	NA	-10	True	AATACA	-14	NA	89064929	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040378_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043659_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.67	chr15	-	6391	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	98	-5	intron_retention	FALSE	canonical	0	0	junction_15	88.8669362552036	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	9241	False	NA	-10	True	AATACA	-14	NA	89064893	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044458_89044566_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.68	chr15	-	6739	38	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3261	-5	intron_retention	FALSE	canonical	0	0	junction_37	73.775209877053	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGTTGACTGGGTTT	NA	False	NA	-10	True	AATACA	-14	NA	89058152	89039756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89057781
ES.12557.69	chr15	-	6344	39	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3261	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	97.1799171027051	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGGTTGACTGGGTT	NA	False	NA	-11	True	AATACA	-13	NA	89058152	89039757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050566_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89058099
ES.12557.70	chr15	-	7609	29	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	53	-6	intron_retention	FALSE	canonical	3	14	junction_28	79.214833181156	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGGTTGACTGGGTT	9196	False	NA	-11	True	AATACA	-13	NA	89064938	89039757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044987_89045087_89045316_89045426_89045560_89045877_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048738_89049449_89049604_89049905_89050033_89050108_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.71	chr15	-	6493	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	95	-7	intron_retention	FALSE	canonical	0	0	junction_36	74.4292428508985	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTCTGGTTGACTGGGT	9238	False	NA	-12	True	AATACA	-12	NA	89064896	89039758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.73	chr15	-	6533	36	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	63	-8	intron_retention	FALSE	canonical	1	2	junction_14	87.8437574007721	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTCTGGTTGACTGGG	9206	False	NA	-13	True	AATACA	-11	NA	89064928	89039759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044554_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
ES.12557.74	chr15	-	6820	37	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	28	-8	intron_retention	FALSE	canonical	0	0	junction_36	74.6773099226529	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTCTGGTTGACTGGG	9171	False	NA	-13	True	AATACA	-11	NA	89064963	89039759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.76	chr15	-	2317	13	ISM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	98	7737	98	1605	5prime_fragment	FALSE	canonical	0	0	junction_12	79.3268117067335	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGGTACCACTGCTT	9241	False	NA	NA	False	NA	NA	NA	89064893	89047488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ES.12557.8	chr15	-	1458	1	NIC	ENSMUSG00000036606.18	novel	6394	36	NA	NA	-87	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89041209	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89039800_89041200
ES.12557.9	chr15	-	6942	37	NNC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-3461	0	intron_retention	FALSE	canonical	0	0	junction_36	74.6773099226529	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89058352	89039751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89058142
ES.12558.1	chr15	-	4081	15	ISM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	7567	0	-37	0	3prime_fragment	FALSE	canonical	3	25	junction_9	20.4340651953585	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTTTAATATTTT	2838	False	NA	1	True	ATTAAA	-22	NA	89073084	89066415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976
ES.12558.10	chr15	-	4693	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATACTTGTCTTTTAAT	NA	False	NA	-4	True	ATTAAA	-17	NA	89080667	89066420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.11	chr15	-	6193	16	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	17	junction_15	28.5208695519614	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAATACTTGTCTTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	89080675	89066423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.12	chr15	-	3254	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	28	0	intron_retention	FALSE	canonical	3	17	junction_16	28.4582341994369	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080619	89069014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.13	chr15	-	3396	15	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	84	junction_10	12.51142335171	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080662	89069014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.14	chr15	-	3164	13	NIC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	78	junction_8	13.1909059582729	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080667	89069014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.15	chr15	-	2899	16	NNC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	8	junction_4	35.2739122991608	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080648	89069014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070456_89070565_89070631_89070956_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.16	chr15	-	2282	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	17	junction_19	26.5207805419452	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080667	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.17	chr15	-	2050	18	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	7	junction_14	24.7445076216814	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080700	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.18	chr15	-	3016	17	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	17	junction_16	28.5738489488203	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080656	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.19	chr15	-	2084	21	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	29	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	31.0267626413069	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080618	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.2	chr15	-	5813	14	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	38	0	intron_retention	FALSE	canonical	3	7	junction_2	27.5356681006922	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTTTAATATTTT	NA	False	NA	1	True	ATTAAA	-22	NA	89080609	89066415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069572_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.20	chr15	-	2550	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	78	junction_12	12.8048757803424	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080657	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.21	chr15	-	2285	19	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_18	25.6471787488951	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080667	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075419_89080421
ES.12558.22	chr15	-	2009	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-24	2600	-7	-1	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080675	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.23	chr15	-	2706	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	24	-1	intron_retention	FALSE	canonical	3	70	junction_6	13.7453117007218	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080623	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.24	chr15	-	2386	18	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	29	-1	intron_retention	FALSE	canonical	3	8	junction_5	24.5920346065543	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080618	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070456_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.25	chr15	-	3101	16	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	84	junction_11	12.2499886621263	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080651	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.26	chr15	-	2357	20	NNC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	24	-1	intron_retention	FALSE	canonical	0	0	junction_14	36.7986962312706	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080623	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.27	chr15	-	2924	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	37	-1	intron_retention	FALSE	canonical	3	84	junction_12	12.2672073023977	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080610	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.28	chr15	-	4249	14	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	8	-1	intron_retention	FALSE	canonical	3	17	junction_13	30.4037914172621	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080660	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073721_89074443_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.29	chr15	-	2075	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	25	junction_8	21.0138842990375	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080668	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.3	chr15	-	6995	14	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	28	0	intron_retention	FALSE	canonical	3	17	junction_13	31.3917789712888	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTTTTAATATTTT	NA	False	NA	1	True	ATTAAA	-22	NA	89080619	89066415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.30	chr15	-	2144	21	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.0240534598604	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080663	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071387_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.31	chr15	-	1974	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	6	-1	intron_retention	FALSE	canonical	2	7	junction_10	25.5244980362004	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080662	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.32	chr15	-	2415	18	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	8	junction_6	24.1196555835096	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080667	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070456_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.33	chr15	-	2341	18	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	8	-1	intron_retention	FALSE	canonical	3	8	junction_7	24.2997429749888	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080660	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.34	chr15	-	2518	17	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	0	-1	intron_retention	FALSE	canonical	3	70	junction_5	14.3045829631625	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080668	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.35	chr15	-	3379	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	70	junction_7	13.8721843990051	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTCCCTGACTATTG	NA	False	NA	0	True	AGTAAA	-18	NA	89080668	89069015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.36	chr15	-	2087	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-7	2	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080658	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.37	chr15	-	2601	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	6	2	intron_retention	FALSE	canonical	3	17	junction_18	26.944387170615	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080662	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.38	chr15	-	3074	15	NNC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	24	2	intron_retention	FALSE	canonical	0	0	junction_10	35.7054989190912	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080623	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.39	chr15	-	1883	20	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	28.8660100706024	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080625	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069762_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.4	chr15	-	5239	16	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	8	junction_6	25.5928809545849	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGTCTTTTAATATTT	NA	False	NA	0	True	ATTAAA	-21	NA	89080667	89066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070456_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.40	chr15	-	2340	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	2	2	intron_retention	FALSE	canonical	2	7	junction_13	24.9767860972944	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080666	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.41	chr15	-	3644	16	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	2	2	intron_retention	FALSE	canonical	3	17	junction_15	29.3911551321142	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080666	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.42	chr15	-	3534	14	NIC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	1	2	intron_retention	FALSE	canonical	3	84	junction_9	12.3886758752027	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080667	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.43	chr15	-	3677	16	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-14	2	intron_retention	FALSE	canonical	3	8	junction_8	26.0943586921686	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080682	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.44	chr15	-	3777	15	NNC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_7	35.8816080453255	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080667	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069572_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071437_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.45	chr15	-	3069	13	NIC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	1	2	intron_retention	FALSE	canonical	2	7	junction_7	28.5076744053246	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGTCCCTGACTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	89080667	89069017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.46	chr15	-	3299	17	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_8	25.2806126310262	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTGGTCCCTGACT	NA	False	NA	-4	True	AGTAAA	-14	NA	89080668	89069019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.47	chr15	-	2733	18	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-26	0	intron_retention	FALSE	canonical	3	17	junction_17	27.7224254345163	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080725	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.48	chr15	-	3602	13	NNC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	6	0	intron_retention	TRUE	canonical	0	0	junction_11	28.3602813024758	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080662	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069470_89069564_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075115_89075192_89075232_89080421
ES.12558.49	chr15	-	2399	19	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_14	36.3092427779913	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080662	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.5	chr15	-	7357	8	NIC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	-695	-2	intron_retention	FALSE	canonical	3	84	junction_7	8.96705990084298	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGTCTTTTAATATT	715	False	NA	-1	True	ATTAAA	-20	NA	89075207	89066417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976
ES.12558.50	chr15	-	3722	15	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	17	junction_14	30.4081923708942	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080659	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072355_89072412_89072661_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.51	chr15	-	2110	18	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	27	0	intron_retention	FALSE	canonical	3	7	junction_2	25.0010380407332	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080620	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069572_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.52	chr15	-	2654	18	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	70	junction_7	13.5043245668534	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080672	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.53	chr15	-	3407	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_9	32.4257937260668	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080667	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.54	chr15	-	3495	17	NIC	ENSMUSG00000015377.11	novel	2677	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	17	junction_16	28.4697619194471	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080657	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
ES.12558.55	chr15	-	2764	17	NIC	ENSMUSG00000015377.11	novel	2028	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	78	junction_12	12.9902307042639	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080667	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89070251_89070374_89070465_89070565_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.56	chr15	-	2134	20	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_15	30.8850069857479	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTCTGGTCCCTGA	NA	False	NA	-6	True	AGTAAA	-12	NA	89080663	89069021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073374_89073421_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.57	chr15	-	2138	19	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_8	25.6455540872964	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACAGTCTGGTCCCTG	NA	False	NA	-7	True	AGTAAA	-11	NA	89080668	89069022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071069_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.58	chr15	-	4129	11	NIC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	5	-1	intron_retention	FALSE	canonical	2	7	junction_6	31.1197686366721	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACAGTCTGGTCCCTG	NA	False	NA	-7	True	AGTAAA	-11	NA	89080663	89069022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89069313_89069394_89069470_89069564_89070251_89070374_89070465_89070565_89071447_89071534_89071658_89072813_89072894_89072976_89074557_89075076_89075120_89075192_89075232_89080421
ES.12558.7	chr15	-	3404	7	NNC	ENSMUSG00000015377.11	novel	5261	16	NA	NA	2400	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.4909801843959	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATACTTGTCTTTTAATA	5275	False	NA	-3	True	ATTAAA	-18	NA	89070647	89066419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069313_89069394_89069470_89069564_89069687_89069762_89069851_89070196_89070251_89070374_89070465_89070565
ES.12558.9	chr15	-	6008	12	NNC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	8	junction_3	28.5691852720276	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATACTTGTCTTTTAATA	NA	False	NA	-3	True	ATTAAA	-18	NA	89080666	89066419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89069668_89069740_89070251_89070374_89070456_89070565_89071447_89071534_89071658_89072355_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ES.12559.1	chr15	-	158	1	Intergenic	novelGene_10498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	89084428	89084270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89084300_89084400
ES.1256.1	chr1	+	162	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128340455	128340617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128340500_128340600
ES.12560.1	chr15	+	4172	25	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-29	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.9627895893088	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6634	False	NA	84	True	AATAAA	-20	NA	89095726	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126477_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158296_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.10	chr15	+	3490	25	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	7.25718035235908	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCAGTGGAACCAG	6670	False	NA	NA	False	AATAAA	-14	NA	89095762	89170464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.11	chr15	+	4441	27	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.44237340083067	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6671	False	NA	84	True	AATAAA	-20	NA	89095763	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89143693_89143811_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.12	chr15	+	3506	25	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.23093335466209	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGGAACCAGTTGGA	6671	False	NA	NA	False	AATAAA	-19	NA	89095763	89170469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152845_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.13	chr15	+	3574	25	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.23852316188338	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGTGGAACCAGTTG	6673	False	NA	NA	False	AATAAA	-17	NA	89095765	89170467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146706_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.14	chr15	+	2065	8	FSM	ENSMUSG00000036561.10	ENSMUST00000226779.2	2072	8	8	-1	-1	1	multi-exon	FALSE	canonical	2	19	junction_2	4.65109159888563	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTGCTGTTATGAGT	6677	False	NA	NA	False	NA	NA	NA	89095769	89147472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555
ES.12560.15	chr15	+	3646	26	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.863841300535	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGTGGAACCAGTTG	6682	False	NA	NA	False	AATAAA	-17	NA	89095774	89170467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146706_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.16	chr15	+	4390	26	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.863841300535	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTCTTATTGTT	6683	False	NA	79	True	AATAAA	-15	NA	89095775	89171213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146705_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.17	chr15	+	3531	26	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	6.88697321034429	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCAGTGGAACCAGTT	6712	False	NA	NA	False	AATAAA	-16	NA	89095804	89170466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.18	chr15	+	136	1	Intergenic	novelGene_10499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	6548	False	NA	NA	False	NA	NA	NA	89105808	89105944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89105800_89105900
ES.12560.19	chr15	+	2648	2	FSM	ENSMUSG00000036561.10	ENSMUST00000227011.2	2496	2	-154	2	-154	-2	multi-exon	FALSE	canonical	3	26	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAGTGTGTCTTATTG	NA	False	NA	77	True	AATAAA	-13	NA	89168472	89171211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89170210_89170300
ES.12560.2	chr15	+	9580	22	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-17	5	intron_retention	FALSE	canonical	2	7	junction_16	6.72592709134549	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6646	False	NA	84	True	AATAAA	-20	NA	89095738	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293
ES.12560.3	chr15	+	3665	27	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	8.33400391779216	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGATGACCCAGCTCCT	6661	False	NA	NA	False	AATAAA	-32	NA	89095753	89170482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89167530_89167598_89169981_89170210_89170300
ES.12560.4	chr15	+	4334	26	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	6.88697321034429	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6661	False	NA	84	True	AATAAA	-20	NA	89095753	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.5	chr15	+	4251	25	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	7.25718035235908	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6663	False	NA	84	True	AATAAA	-20	NA	89095755	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.6	chr15	+	6123	24	NNC	ENSMUSG00000036561.10	novel	3297	24	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_6	9.81550026074168	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGGAACCAGTTGGA	6664	False	NA	NA	False	AATAAA	-19	NA	89095756	89170469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143289_89143407_89146555_89146706_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167068_89167282_89167530
ES.12560.7	chr15	+	3587	25	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.73053390247253	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGATGACCCAGCTCCT	6664	False	NA	NA	False	AATAAA	-32	NA	89095756	89170482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137454_89140865_89141053_89143268_89143407_89146555_89146706_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.8	chr15	+	4235	25	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.23852316188338	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTATTGTTAGGCT	6664	False	NA	84	True	AATAAA	-20	NA	89095756	89171218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126477_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12560.9	chr15	+	3787	28	NNC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	-2	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.0759802118246	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTTGGATGACCCAGC	6667	False	NA	NA	False	AATAAA	-28	NA	89095759	89170478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137454_89140865_89141053_89143268_89143407_89143693_89143811_89146555_89146622_89149331_89149445_89149807_89149922_89152710_89152833_89153432_89153531_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ES.12561.1	chr15	+	1522	13	Antisense	novelGene_ENSMUSG00000098442.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAGCTTGAGTCACCTT	8432	False	NA	NA	False	NA	NA	NA	89189364	89200070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_89189465_89189546_89189675_89189745_89189860_89190196_89190278_89190383_89190499_89190574_89190683_89190782_89190911_89191026_89191141_89191697_89191807_89191889_89192048_89192223_89192366_89192690_89192773_89199927
ES.12562.1	chr15	-	133	1	Intergenic	novelGene_10500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	8719	False	NA	NA	False	NA	NA	NA	89114423	89114290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89114300_89114400
ES.12563.1	chr15	-	180	1	Intergenic	novelGene_10501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAACCTATGT	7734	False	NA	NA	False	NA	NA	NA	89129857	89129677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89129700_89129900
ES.12564.1	chr15	-	130	1	Antisense	novelGene_ENSMUSG00000036561.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAGAAAAACAAA	6416	False	NA	NA	False	NA	NA	NA	89143187	89143057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_89143100_89143200
ES.12565.1	chr15	-	6236	42	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	20560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.3710160255174	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATCTTAGTAGCCCTTG	NA	False	NA	NA	False	NA	NA	NA	89199478	89151878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89151925_89172480_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.10	chr15	-	6276	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-10	8	intron_retention	FALSE	canonical	3	242	junction_22	71.9735962251656	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCATCAGCACTGCAT	NA	False	NA	-7	True	TATAAA	-25	NA	89199484	89172477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.100	chr15	-	6377	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_7	87.8467450995715	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199479	89172488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178056_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.103	chr15	-	7523	37	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_19	103.960829963341	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAATTGTACGCCTGCA	NA	False	NA	-19	True	TATAAA	-13	NA	89199479	89172489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187286_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189079_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.104	chr15	-	6466	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-9	0	intron_retention	FALSE	canonical	3	36	junction_35	82.3968380441118	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAATTGTACGCCTGCA	NA	False	NA	-19	True	TATAAA	-13	NA	89199483	89172489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.105	chr15	-	6693	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	1	junction_6	88.7069508561415	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACACAATTGTACGCCTGC	NA	False	NA	-20	True	TATAAA	-12	NA	89199478	89172490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177853_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.107	chr15	-	6164	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	87.3349729489853	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACACAATTGTACGCCTGC	NA	False	NA	-20	True	TATAAA	-12	NA	89199469	89172490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180226_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.108	chr15	-	4214	21	NIC	ENSMUSG00000036529.18	novel	6190	40	NA	NA	1	-2	intron_retention	FALSE	canonical	2	8	junction_12	69.6257854533793	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACACAATTGTACGCCTG	8931	False	NA	-21	True	TATAAA	-11	NA	89187536	89172491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186729_89186807_89186981_89187079_89187349_89187422
ES.12565.109	chr15	-	4042	26	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	104.803053390634	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGACACAATTGTACGCCT	NA	False	NA	-22	True	TATAAA	-10	NA	89199478	89172492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186053_89186174_89186384_89186581_89186654_89186729_89186807_89186902_89191980_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.11	chr15	-	6175	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	87.0516764628919	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCATCAGCACTGCAT	NA	False	NA	-7	True	TATAAA	-25	NA	89199478	89172477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184441_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.110	chr15	-	6237	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	242	junction_21	71.9567131913836	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGACACAATTGTACGCCT	NA	False	NA	-22	True	TATAAA	-10	NA	89199465	89172492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.111	chr15	-	6165	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	87.2912903730951	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGACACAATTGTACGCCT	NA	False	NA	-22	True	TATAAA	-10	NA	89199481	89172492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178163_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.113	chr15	-	5338	37	NNC	ENSMUSG00000036529.18	novel	773	8	NA	NA	-4	-509	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	91.2300037281974	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACGCTTTGCCTGCATG	NA	False	NA	NA	False	ATTAAA	-17	NA	89199478	89174447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89174584_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.114	chr15	-	1758	12	NIC	ENSMUSG00000036529.18	novel	6190	40	NA	NA	-5	-191	intron_retention	FALSE	canonical	3	374	junction_5	28.506632547068	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCCAGCTGTGGCGATG	NA	False	NA	NA	False	NA	NA	NA	89199479	89189281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.12	chr15	-	6028	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	86.9101511619903	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199479	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186549_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.13	chr15	-	2358	11	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-379	7	intron_retention	FALSE	canonical	3	271	junction_10	26.4733828590152	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	7208	False	NA	-8	True	TATAAA	-24	NA	89180233	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154
ES.12565.14	chr15	-	6484	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-3	7	intron_retention	FALSE	canonical	3	242	junction_20	72.0168493673375	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199477	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.15	chr15	-	6199	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	83.7192891453338	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199479	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192681_89192774_89199264
ES.12565.16	chr15	-	6392	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	7	intron_retention	FALSE	canonical	3	242	junction_22	71.6638670028001	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199482	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.17	chr15	-	6174	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_23	85.3636339432665	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199478	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187331_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.18	chr15	-	6368	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	6	7	intron_retention	FALSE	canonical	0	0	junction_4	88.4746274097318	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCATCAGCACTGCA	NA	False	NA	-8	True	TATAAA	-24	NA	89199508	89172478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174127_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.19	chr15	-	6477	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	6	intron_retention	FALSE	canonical	0	0	junction_4	89.153005054509	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCTGCATCAGCACTGC	NA	False	NA	-9	True	TATAAA	-23	NA	89199478	89172479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174127_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.2	chr15	-	3731	2	Antisense	novelGene_ENSMUSG00000036561.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGAAAGAGGATCT	NA	False	NA	NA	False	NA	NA	NA	89156903	89151890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_89152645_89153926
ES.12565.21	chr15	-	7562	36	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	6	intron_retention	FALSE	canonical	3	242	junction_19	71.5953253519034	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCTGCATCAGCACTGC	NA	False	NA	-9	True	TATAAA	-23	NA	89199479	89172479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.24	chr15	-	6161	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	86.8066781705187	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGCCTGCATCAGCACT	NA	False	NA	-11	True	TATAAA	-21	NA	89199481	89172481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173116_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.25	chr15	-	6181	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	87.1432154559378	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184097_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.26	chr15	-	6263	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	3	intron_retention	FALSE	canonical	1	1	junction_6	111.136203609779	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199465	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177853_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189672_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192400_89192687_89192774_89199264
ES.12565.27	chr15	-	6322	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.4339715156529	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199480	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174366_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.29	chr15	-	6731	37	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	intron_retention	FALSE	canonical	3	242	junction_20	69.7965296813212	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192363_89192687_89192774_89199264
ES.12565.3	chr15	-	2403	2	FSM	ENSMUSG00000036529.18	ENSMUST00000176277.2	317	2	-51	-2035	-51	1714	multi-exon	FALSE	canonical	3	351	junction_1	0	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTCCTCCGTGCATTA	7919	False	NA	NA	False	NA	NA	NA	89173213	89170724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89172929_89173014
ES.12565.30	chr15	-	6130	40	FSM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	16	44	16	3	multi-exon	FALSE	canonical	2	8	junction_12	87.3656082615084	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199498	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.31	chr15	-	6293	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	intron_retention	FALSE	non_canonical	0	0	junction_9	86.9086214438034	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178528_89178603_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.33	chr15	-	6630	38	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-2	3	intron_retention	FALSE	canonical	1	4	junction_37	83.7239280526242	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199476	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89199264
ES.12565.36	chr15	-	6218	42	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7578	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	108.313050161175	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89207092	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184302_89184424_89184508_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89206884
ES.12565.37	chr15	-	6644	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-24	3	intron_retention	FALSE	canonical	3	242	junction_21	72.3888009581256	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199538	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.39	chr15	-	6384	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	3	intron_retention	FALSE	canonical	3	13	junction_22	86.4101118464894	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199466	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187346_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.4	chr15	-	5793	1	Genic_Genomic	ENSMUSG00000036529.18	novel	NA	NA	NA	NA	1496	1714	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTCCTCCGTGCATTA	4615	False	NA	NA	False	NA	NA	NA	89176517	89170724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_89170700_89176500
ES.12565.40	chr15	-	6269	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	3	intron_retention	FALSE	canonical	3	242	junction_21	71.6320130887392	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199481	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.41	chr15	-	6254	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	3	intron_retention	FALSE	canonical	3	36	junction_36	80.8796884104418	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199478	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.42	chr15	-	6224	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.4339715156529	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199478	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174270_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.43	chr15	-	6153	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	87.3268250596574	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACGCCTGCATCAGCAC	NA	False	NA	-12	True	TATAAA	-20	NA	89199479	89172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178641_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.44	chr15	-	3782	17	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	760	1	intron_retention	FALSE	canonical	3	247	junction_13	30.8964373957581	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	4466	False	NA	-14	True	TATAAA	-18	NA	89186073	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045
ES.12565.45	chr15	-	5602	13	ISM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	15825	-1	1030	1	3prime_fragment	FALSE	canonical	3	271	junction_12	26.4809942327616	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	6906	False	NA	-14	True	TATAAA	-18	NA	89183633	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154
ES.12565.46	chr15	-	6344	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-11	1	intron_retention	FALSE	canonical	2	10	junction_37	84.0710072128341	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199485	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192151_89192363_89192687_89192774_89199264
ES.12565.48	chr15	-	6795	38	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	1	intron_retention	FALSE	canonical	3	242	junction_19	72.0251660425881	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199479	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.49	chr15	-	6471	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	1	intron_retention	FALSE	canonical	2	10	junction_37	83.7240465835913	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199479	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192151_89192363_89192687_89192774_89199264
ES.12565.5	chr15	-	5343	38	NNC	ENSMUSG00000036529.18	novel	773	8	NA	NA	-4	1714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.921171732514	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTCCTCCGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	89199478	89170724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89170756_89174449_89174560_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.50	chr15	-	6328	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	4	1	intron_retention	FALSE	canonical	3	242	junction_21	72.6716375039597	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199470	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.51	chr15	-	10617	36	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	1	intron_retention	FALSE	canonical	3	242	junction_17	73.4827482183015	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199479	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.52	chr15	-	4519	27	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	186	1	intron_retention	FALSE	canonical	3	244	junction_26	31.6218410027368	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	7355	False	NA	-14	True	TATAAA	-18	NA	89189112	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083
ES.12565.53	chr15	-	6292	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	13	1	intron_retention	FALSE	canonical	3	242	junction_22	68.626891450158	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199501	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.54	chr15	-	7056	38	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_9	89.4815437752732	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199479	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178641_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.56	chr15	-	6197	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_38	97.0952625002889	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199478	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189360_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192218_89192363_89192687_89192774_89199264
ES.12565.59	chr15	-	6150	41	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	2	17	junction_6	85.8794940599908	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199478	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177834_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.6	chr15	-	5755	2	NNC	ENSMUSG00000036529.18	novel	317	2	NA	NA	1462	1686	intron_retention	TRUE	non_canonical	0	0	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4581	False	NA	NA	False	NA	NA	NA	89176551	89170752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89174644_89174687
ES.12565.62	chr15	-	6334	38	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-9	1	intron_retention	FALSE	canonical	1	1	junction_17	108.484735842808	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199483	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.63	chr15	-	6559	38	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	1	intron_retention	FALSE	canonical	3	242	junction_20	72.9835427780493	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199481	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.64	chr15	-	6180	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.4181903267278	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199478	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179341_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.66	chr15	-	5252	32	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	393	1	intron_retention	FALSE	canonical	1	1	junction_6	89.6060170604872	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	6040	False	NA	-14	True	TATAAA	-18	NA	89190427	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177853_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187346_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382
ES.12565.67	chr15	-	6079	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_28	87.0655967989458	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199470	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.68	chr15	-	6273	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	1	intron_retention	FALSE	canonical	3	242	junction_21	71.8619466893678	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199479	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.69	chr15	-	4708	11	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	2377	1	intron_retention	FALSE	canonical	3	286	junction_6	23.7968485308454	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	8253	False	NA	-14	True	TATAAA	-18	NA	89182286	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597
ES.12565.70	chr15	-	6247	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_38	83.1692513793409	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTACGCCTGCATCAGC	NA	False	NA	-14	True	TATAAA	-18	NA	89199466	89172484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192151_89192363_89192687_89192774_89199264
ES.12565.72	chr15	-	6869	37	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	0	intron_retention	FALSE	canonical	3	242	junction_18	71.4687620615978	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199479	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.73	chr15	-	6288	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	0	intron_retention	FALSE	canonical	3	242	junction_21	71.5301162304532	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199482	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.74	chr15	-	6968	37	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	0	intron_retention	FALSE	canonical	3	242	junction_20	69.6073422762673	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199478	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192363_89192687_89192774_89199264
ES.12565.75	chr15	-	6188	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	84.0948831677647	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199482	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192042_89192218_89192363_89192687_89192774_89199264
ES.12565.76	chr15	-	4511	12	ISM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	17290	0	-2314	0	intron_retention	FALSE	canonical	3	283	junction_2	24.716575226133	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	8371	False	NA	-15	True	TATAAA	-17	NA	89182168	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597
ES.12565.77	chr15	-	6349	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-9	0	intron_retention	FALSE	canonical	3	242	junction_22	71.5696007829629	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199483	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.78	chr15	-	4851	28	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-95	0	intron_retention	FALSE	canonical	0	0	junction_1	61.3613060205143	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	7074	False	NA	-15	True	TATAAA	-17	NA	89189393	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172946_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365
ES.12565.79	chr15	-	6716	38	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	0	intron_retention	FALSE	canonical	3	242	junction_19	73.0157332175559	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199479	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178708_89179335_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.8	chr15	-	6177	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-17	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	98.6382785737869	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCACTGCATCAGACTG	NA	False	NA	0	True	TATAAA	-32	NA	89199491	89172470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184441_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187331_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.80	chr15	-	6314	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_27	100.146236564641	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199477	89172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177834_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189543_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.82	chr15	-	6220	42	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	99.1778097842408	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	NA	False	NA	-16	True	TATAAA	-16	NA	89199478	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184302_89184424_89184508_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.83	chr15	-	6286	10	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	1286	-1	intron_retention	FALSE	canonical	3	283	junction_2	19.4009036317486	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	7162	False	NA	-16	True	TATAAA	-16	NA	89183377	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89174020_89174125_89174234_89177638_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597
ES.12565.84	chr15	-	6204	39	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_9	101.843414244274	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	NA	False	NA	-16	True	TATAAA	-16	NA	89199469	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178708_89179453_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187346_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.86	chr15	-	7197	38	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	242	junction_19	72.2355735506703	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	NA	False	NA	-16	True	TATAAA	-16	NA	89199466	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.89	chr15	-	6250	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	11	junction_29	93.9422024949327	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	NA	False	NA	-16	True	TATAAA	-16	NA	89199481	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189672_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.9	chr15	-	6229	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	-56	-8	0	8	multi-exon	FALSE	canonical	3	242	junction_22	71.0688002923927	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCATCAGCACTGCAT	NA	False	NA	-7	True	TATAAA	-25	NA	89199514	89172477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.90	chr15	-	6162	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	86.6965829776468	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGTACGCCTGCATCA	NA	False	NA	-16	True	TATAAA	-16	NA	89199480	89172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187558_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.91	chr15	-	6757	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-8	1	intron_retention	FALSE	canonical	3	242	junction_20	71.4373987422426	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATTGTACGCCTGCATC	NA	False	NA	-17	True	TATAAA	-15	NA	89199466	89172487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.93	chr15	-	6279	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_31	86.9859163221023	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATTGTACGCCTGCATC	NA	False	NA	-17	True	TATAAA	-15	NA	89199478	89172487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190295_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.95	chr15	-	6860	37	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	6	0	intron_retention	FALSE	canonical	3	13	junction_19	89.2318903022545	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199468	89172488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187346_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.96	chr15	-	6449	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-5	0	intron_retention	FALSE	canonical	3	242	junction_21	70.8379065385905	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199463	89172488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12565.97	chr15	-	6557	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	-4	0	intron_retention	FALSE	canonical	3	242	junction_21	71.4148182495393	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199478	89172488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ES.12566.1	chr15	+	1081	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	223	-6	223	6	multi-exon	FALSE	canonical	3	63	junction_1	15	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTCTTGTGCAGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	89207145	89208940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89207337_89207479_89207604_89208174
ES.12566.2	chr15	+	2584	1	Genic_Genomic	ENSMUSG00000054136.7	novel	NA	NA	NA	NA	240	812	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	89207162	89209746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_89207200_89209700
ES.12567.1	chr15	+	202	1	Intergenic	novelGene_10502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGCTCAGAAAGGCCCAA	NA	False	NA	NA	False	NA	NA	NA	89233113	89233315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89233100_89233300
ES.12568.1	chr15	+	151	1	Intergenic	novelGene_10503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTTTAAAAAAGAAATG	NA	False	NA	NA	False	AAAACA	-12	NA	89234192	89234343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89234200_89234300
ES.12569.1	chr15	+	2085	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-22	16	at_least_one_novel_splicesite	TRUE	canonical	1	78	junction_18	254.664126202564	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239899	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255302_89255447_89255513
ES.12569.10	chr15	+	2386	16	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	4	15	intron_retention	FALSE	canonical	1	369	junction_11	175.074384191406	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89239942	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296
ES.12569.11	chr15	+	1963	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	21	1239	4	24	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGACAGACTATTTAAAT	NA	False	NA	22	True	AATAAA	-22	NA	89239942	89255790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.14	chr15	+	6282	17	NNC	ENSMUSG00000008690.16	novel	3255	20	NA	NA	10	15	intron_retention	FALSE	canonical	0	0	junction_1	364.836773220231	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89239948	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.15	chr15	+	2033	20	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	12	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	320.159906376438	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89239950	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244567_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.16	chr15	+	3398	19	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	369	junction_14	164.585975131165	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGTTGATCCTCTGG	NA	False	NA	4	True	AATAAA	-14	NA	89239952	89257027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.17	chr15	+	3335	19	ISM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-13	0	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	273.212891259943	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239952	89257029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296
ES.12569.2	chr15	+	2084	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	-19	1234	-2	29	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTATTTAAATGAGCT	NA	False	NA	27	True	AATAAA	-27	NA	89239919	89255795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.20	chr15	+	2310	1	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	-12	-5820	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCTTCAGACACCCCAG	NA	False	NA	NA	False	NA	NA	NA	89239953	89242263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240000_89242300
ES.12569.25	chr15	+	6537	18	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-12	14	intron_retention	FALSE	canonical	1	14	junction_11	331.565250849564	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89239953	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255197_89255296_89255447_89255513
ES.12569.26	chr15	+	3267	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239953	89257029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.27	chr15	+	2043	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-11	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	270.832746785358	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89239954	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254127_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.28	chr15	+	2187	18	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-11	14	intron_retention	FALSE	canonical	3	800	junction_1	71.5197361877116	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89239954	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296
ES.12569.30	chr15	+	6458	19	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-11	22	intron_retention	FALSE	canonical	1	14	junction_11	274.01193990386	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCGGACAGACTATTTAA	NA	False	NA	20	True	AATAAA	-20	NA	89239954	89255788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.31	chr15	+	3309	20	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	318.931309305627	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTTGATCCTCTGGC	NA	False	NA	5	True	AATAAA	-15	NA	89239954	89257028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253794_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.32	chr15	+	2007	20	NNC	ENSMUSG00000008690.16	novel	3255	20	NA	NA	-5	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	327.404922656183	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239960	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255302_89255447_89255513
ES.12569.33	chr15	+	6170	18	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-5	17	intron_retention	FALSE	canonical	1	14	junction_11	279.345007505044	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239960	89255783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255197_89255296_89255447_89255513
ES.12569.34	chr15	+	1925	19	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-4	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	277.068633695295	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89239961	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.36	chr15	+	2005	20	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-1	16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	317.364694051608	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239964	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255118_89255197_89255296_89255447_89255513
ES.12569.38	chr15	+	2000	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	1	16	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_6	265.773027109709	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239966	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248314_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.40	chr15	+	634	7	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	30	8675	3	247	5prime_fragment	FALSE	canonical	3	800	junction_1	90.0655625394943	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTGCTTTATGTTAGA	NA	False	NA	NA	False	NA	NA	NA	89239968	89248354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290
ES.12569.43	chr15	+	2196	18	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	5	24	intron_retention	FALSE	canonical	0	0	junction_8	282.312141660113	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGACAGACTATTTAAAT	NA	False	NA	22	True	AATAAA	-22	NA	89239970	89255790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253588_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255197_89255296_89255447_89255513
ES.12569.44	chr15	+	6073	19	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	5	17	intron_retention	FALSE	canonical	1	369	junction_13	164.992676605155	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTCACCGGACAGACTA	NA	False	NA	15	True	AATAAA	-15	NA	89239970	89255783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.45	chr15	+	3353	19	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	6	0	intron_retention	FALSE	canonical	1	369	junction_13	165.513389484855	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239971	89257029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.46	chr15	+	2185	18	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	6	15	intron_retention	FALSE	canonical	1	14	junction_10	281.687819547919	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89239971	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.47	chr15	+	6721	17	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	6	14	intron_retention	FALSE	canonical	1	369	junction_12	173.087394381422	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89239971	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.5	chr15	+	3245	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	3	-25	3	25	multi-exon	FALSE	canonical	1	145	junction_1	244.22211859964	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAAGAGGTGATCCTTT	NA	False	NA	31	True	AATAAA	-41	NA	89239924	89257054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.51	chr15	+	2257	17	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	6	14	intron_retention	FALSE	canonical	3	800	junction_1	73.7207304206218	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89239971	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296
ES.12569.52	chr15	+	2100	19	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	6	16	intron_retention	FALSE	canonical	1	14	junction_12	275.061569987431	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239971	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.54	chr15	+	2148	19	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	9	16	intron_retention	FALSE	canonical	1	1	junction_8	326.368481631528	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239974	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89249577_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.55	chr15	+	2291	18	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	9	16	intron_retention	FALSE	canonical	1	369	junction_13	169.018989125841	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239974	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.6	chr15	+	3313	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	-14	0	3	0	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239924	89257029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.61	chr15	+	2083	19	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	-14	16	intron_retention	FALSE	canonical	3	800	junction_1	75.4777377038348	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89239993	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.63	chr15	+	2328	19	NIC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	7	14	intron_retention	FALSE	canonical	1	369	junction_13	165.497277214557	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89240030	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.64	chr15	+	4534	17	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	2025	15	intron_retention	FALSE	canonical	1	369	junction_12	167.655524812038	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTTCACCGGACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	89242141	89255781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.65	chr15	+	4134	18	NNC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	2243	16	intron_retention	FALSE	canonical	1	14	junction_10	281.381035603382	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	NA	False	NA	14	True	AATAAA	-14	NA	89242359	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.66	chr15	+	4049	15	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	2851	14	intron_retention	FALSE	canonical	1	369	junction_10	178.772643777691	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	NA	False	NA	12	True	AATAAA	-12	NA	89242967	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89244661_89247633_89247690_89247807_89248205_89248290_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255197_89255296_89255447_89255513
ES.12569.67	chr15	+	1934	18	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	4467	16	intron_retention	FALSE	canonical	1	369	junction_13	163.145274595489	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	1235	False	NA	14	True	AATAAA	-14	NA	89244583	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.68	chr15	+	2313	14	NNC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	-6387	16	intron_retention	FALSE	canonical	1	14	junction_6	315.680817754619	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTTCACCGGACAGACT	4159	False	NA	14	True	AATAAA	-14	NA	89247507	89255782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.7	chr15	+	1997	1	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	3	-6162	mono-exon	FALSE	NA	NA	NA	NA	NA	587	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTCACAATGGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	89239924	89241921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89239900_89241900
ES.12569.70	chr15	+	1195	12	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-4415	14	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	395.324137327483	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGTTCACCGGACAGA	6131	False	NA	12	True	AATAAA	-12	NA	89249479	89255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89249535_89253586_89253659_89253794_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.71	chr15	+	3346	8	NNC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-2300	21	intron_retention	FALSE	canonical	1	14	junction_3	428.767812148596	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCGGACAGACTATTTA	8246	False	NA	19	True	AATAAA	-19	NA	89251594	89255787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89255197_89255296
ES.12569.72	chr15	+	1921	5	NIC	ENSMUSG00000008690.16	novel	3302	20	NA	NA	-488	23	intron_retention	FALSE	canonical	3	1001	junction_3	39.2109678533953	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGGACAGACTATTTAAA	NA	False	NA	21	True	AATAAA	-21	NA	89253406	89255789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89253659_89253818_89253886_89254010_89254879_89254955_89255197_89255296
ES.12569.8	chr15	+	2056	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	-40	1239	4	24	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGACAGACTATTTAAAT	NA	False	NA	22	True	AATAAA	-22	NA	89239925	89255790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ES.12569.9	chr15	+	3277	19	NIC	ENSMUSG00000008690.16	novel	3223	20	NA	NA	4	-2	intron_retention	FALSE	canonical	1	145	junction_1	250.525946760011	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGTTGATCCTCTGG	NA	False	NA	4	True	AATAAA	-14	NA	89239942	89257027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89255012_89255094_89255197_89255296_89255447_89255513
ES.1257.1	chr1	+	147	1	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGAATTAGGAATG	NA	False	NA	NA	False	NA	NA	NA	128340732	128340879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128340700_128340900
ES.1257.2	chr1	+	264	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAATGCTGAAGAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	128340732	128340996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128340700_128341000
ES.12570.1	chr15	+	2148	1	Antisense	novelGene_ENSMUSG00000091780.4_AS_novelGene_ENSMUSG00000022615.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCAGTTATATTTTA	NA	False	NA	NA	False	NA	NA	NA	89257755	89259903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_89257800_89259900
ES.12571.1	chr15	-	3564	11	ISM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	120	-3	35	3	intron_retention	TRUE	canonical	3	177	junction_4	26.2442374627269	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCGGTGTGGCGAGGGC	NA	False	NA	NA	False	AATAAA	-22	NA	89239742	89235203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ES.12571.11	chr15	-	3747	9	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	214	junction_2	20.8985645440064	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239913	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031
ES.12571.12	chr15	-	2933	13	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-44	-1	intron_retention	FALSE	canonical	0	0	junction_2	69.4728164264428	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239906	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236294_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239021_89239558
ES.12571.13	chr15	-	3466	11	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	165	junction_10	28.8658968334608	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239836	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629
ES.12571.14	chr15	-	3595	10	ISM	ENSMUSG00000022614.9	ENSMUST00000230112.2	2815	13	-1	-8	-1	-1	intron_retention	FALSE	canonical	3	177	junction_4	27.272289558777	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239837	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031
ES.12571.15	chr15	-	3356	12	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_11	71.3943767028846	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239835	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238501_89238629_89238659_89238766
ES.12571.16	chr15	-	2521	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_11	87.0797846166887	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239828	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238629_89238659_89238766_89239021_89239558
ES.12571.17	chr15	-	2355	14	NNC	ENSMUSG00000022614.9	novel	2815	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	80.8422380666277	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239836	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238699_89239558_89239614_89239788
ES.12571.18	chr15	-	3223	13	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	29	junction_12	62.1963735991809	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239844	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239614_89239788
ES.12571.19	chr15	-	3280	12	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_11	71.1810635046491	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTAGTGGTTTTTCC	NA	False	NA	-5	True	AATAAA	-19	NA	89239864	89235343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238766
ES.12571.2	chr15	-	2864	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	40	2	-4	-2	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAAGCTGCGGTGTGGCG	NA	False	NA	NA	False	AATAAA	-17	NA	89239822	89235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ES.12571.20	chr15	-	2800	12	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	68	-2	intron_retention	FALSE	canonical	3	165	junction_10	27.5695963813056	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTAGTGGTTTTTCC	NA	False	NA	-5	True	AATAAA	-19	NA	89239709	89235343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239021_89239558
ES.12571.21	chr15	-	2273	13	NNC	ENSMUSG00000022614.9	novel	2815	13	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	89.6473027418499	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTAGTGGTTTTTCC	NA	False	NA	-5	True	AATAAA	-19	NA	89239842	89235343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238658_89238696_89239788
ES.12571.22	chr15	-	4101	13	FSM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	-842	3	-795	1	multi-exon	FALSE	canonical	0	0	junction_12	69.3126471544375	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89240657	89235344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ES.12571.23	chr15	-	2542	14	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	83.9641371739205	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89239866	89235344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239788
ES.12571.24	chr15	-	3253	8	NIC	ENSMUSG00000022614.9	novel	2815	13	NA	NA	4	1	intron_retention	FALSE	canonical	3	214	junction_2	21.3856713426423	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89239811	89235344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237548_89237659_89237802_89238031_89239021_89239558
ES.12571.25	chr15	-	3629	8	NIC	ENSMUSG00000022614.9	novel	3049	10	NA	NA	55	1	intron_retention	FALSE	canonical	3	214	junction_2	18.897143721111	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTAGTGGTTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	89239722	89235344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ES.12571.26	chr15	-	3753	13	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-795	0	intron_retention	FALSE	canonical	0	0	junction_12	69.3126471544375	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTACTAGTGGTTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	89240657	89235345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239614_89240068
ES.12571.27	chr15	-	4477	1	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTACTAGTGGTTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	89239822	89235345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89235300_89239800
ES.12571.28	chr15	-	3376	12	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_7	72.2587179103642	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTACTAGTGGTTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	89239842	89235345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237326_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629
ES.12571.29	chr15	-	2725	14	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_7	86.570011342874	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239838	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237326_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ES.12571.3	chr15	-	2574	15	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	79.1957340120936	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTAGTGGTTTTTCCTTCT	NA	False	NA	-1	True	AATAAA	-23	NA	89239838	89235339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558_89239614_89239788
ES.12571.30	chr15	-	2551	15	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	91.35624929754	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239836	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238299_89238501_89238629_89238659_89238766_89239021_89239558_89239614_89239788
ES.12571.31	chr15	-	2669	13	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	102.404291359732	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239845	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239277_89239788
ES.12571.32	chr15	-	2768	12	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-795	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	71.1810635046491	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89240657	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89240068
ES.12571.33	chr15	-	2991	12	NIC	ENSMUSG00000022614.9	novel	2815	13	NA	NA	12	-1	intron_retention	FALSE	canonical	3	177	junction_4	25.0991422592239	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239850	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89239021_89239558
ES.12571.34	chr15	-	3893	6	NIC	ENSMUSG00000022614.9	novel	3049	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	214	junction_2	18.5623274402754	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239824	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89237548_89237659_89237802_89238031_89238211_89238285
ES.12571.35	chr15	-	3572	10	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	214	junction_2	19.8631117873445	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239817	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285
ES.12571.36	chr15	-	3586	10	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	177	junction_4	27.4023518860861	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239837	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237548_89237659_89237802_89238031_89238211_89238285
ES.12571.37	chr15	-	2791	13	NNC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	3	junction_12	68.5672824474051	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239816	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238984_89239558
ES.12571.38	chr15	-	2622	11	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	348	-1	intron_retention	FALSE	canonical	3	165	junction_10	33.0448180506415	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTACTAGTGGTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	89239002	89235346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629
ES.12571.39	chr15	-	2487	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	11	junction_12	66.5893301429658	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATTTACTAGTGGTTT	NA	False	NA	-9	True	AATAAA	-15	NA	89239838	89235347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89239558
ES.12571.42	chr15	-	2946	10	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	116	-2	intron_retention	FALSE	canonical	0	0	junction_9	75.9897653927451	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATTTACTAGTGGTTT	NA	False	NA	-9	True	AATAAA	-15	NA	89239234	89235347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89237159_89237236_89237548_89237659_89237802_89238031_89238211_89238285_89238659_89238766
ES.12571.43	chr15	-	3422	11	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	73.8125328111697	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATTTACTAGTGGTTT	NA	False	NA	-9	True	AATAAA	-15	NA	89239776	89235347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238659_89238766
ES.12571.44	chr15	-	4176	12	ISM	ENSMUSG00000022614.9	ENSMUST00000230112.2	2815	13	-821	-2	-795	2	intron_retention	FALSE	canonical	0	0	junction_11	71.1810635046491	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATTTACTAGTGGTT	NA	False	NA	-10	True	AATAAA	-14	NA	89240657	89235348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238658
ES.12571.45	chr15	-	2362	12	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	69	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	71.1810635046491	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATTTACTAGTGGTT	NA	False	NA	-10	True	AATAAA	-14	NA	89239708	89235348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89239542
ES.12571.46	chr15	-	2565	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	189	2	intron_retention	FALSE	canonical	0	0	junction_11	68.6138044905445	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATTTACTAGTGGTT	NA	False	NA	-10	True	AATAAA	-14	NA	89239588	89235348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238501_89238629_89238659_89238766_89239021_89239558
ES.12571.5	chr15	-	2299	13	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	68.3192566801874	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239835	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238699_89239788
ES.12571.6	chr15	-	2843	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	-73	136	-73	-1	multi-exon	FALSE	canonical	0	0	junction_12	66.7675469479281	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239935	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ES.12571.7	chr15	-	3167	8	NIC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	-106	-1	intron_retention	FALSE	canonical	1	1	junction_5	84.6806726858651	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239456	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236990_89237061_89237159_89237412_89237802_89238031_89238501_89238629
ES.12571.8	chr15	-	2744	13	NNC	ENSMUSG00000022614.9	novel	2815	13	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_11	68.2647521704202	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239842	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238520_89238762_89239021_89239558
ES.12571.9	chr15	-	2880	13	NIC	ENSMUSG00000022614.9	novel	2906	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	165	junction_11	30.2002575412124	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTAGTGGTTTTTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	89239864	89235342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89239021_89239558
ES.12572.1	chr15	-	177	1	Intergenic	novelGene_10504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACATGTTCA	NA	False	NA	NA	False	NA	NA	NA	89242403	89242226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89242200_89242400
ES.12573.1	chr15	-	5428	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2993	-4457	2993	4457	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTGTGTGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	89258249	89251676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
ES.12573.2	chr15	-	1488	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	-339	-4	-311	4	multi-exon	FALSE	canonical	3	56	junction_2	1.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGCTCTGTACCAGC	NA	False	NA	-3	True	ATTAAA	-18	NA	89258360	89255835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89256669_89257625_89257806_89257885
ES.12573.3	chr15	-	1317	4	ISM	ENSMUSG00000022615.8	ENSMUST00000023285.5	2037	11	2939	-292	2939	292	3prime_fragment	FALSE	canonical	3	35	junction_3	10.6770782520313	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGCATGTGCTCTGT	NA	False	NA	-9	True	ATTAAA	-12	NA	89258303	89255841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_89256669_89257625_89257806_89257885_89258027_89258134
ES.12574.1	chr15	-	177	1	Intergenic	novelGene_10505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAGAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	89281998	89281821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89281800_89282000
ES.12575.1	chr15	+	122	1	Intergenic	novelGene_10506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTTAAAAAAAG	8249	False	NA	NA	False	NA	NA	NA	89295204	89295326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89295200_89295300
ES.12576.1	chr15	-	180	1	Intergenic	novelGene_10507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	89298606	89298426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89298400_89298600
ES.12577.1	chr15	-	166	1	Intergenic	novelGene_10508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	89299338	89299172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89299200_89299300
ES.12578.1	chr15	+	185	1	Intergenic	novelGene_10509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89300179	89300364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89300200_89300400
ES.12579.1	chr15	-	2907	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-12	0	-12	0	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCCATGGGACTAC	5204	False	NA	NA	False	AATAAA	-19	NA	89310078	89300607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ES.12579.2	chr15	-	3823	18	NNC	ENSMUSG00000078937.9	novel	2895	19	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_9	20.3553211801244	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCTCCATGGGACTA	5216	False	NA	NA	False	AATAAA	-18	NA	89310066	89300608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89301183_89301347_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89306079_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ES.12579.3	chr15	-	2825	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	-146	216	-146	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5070	False	NA	NA	False	AATAAA	-22	NA	89310212	89300823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ES.12579.4	chr15	-	3274	18	NIC	ENSMUSG00000078937.9	novel	2895	19	NA	NA	-2	-217	intron_retention	FALSE	canonical	3	54	junction_14	10.9708642135292	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTAGGTGCCTA	5214	False	NA	NA	False	AATAAA	-21	NA	89310068	89300824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89301183_89301347_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ES.12579.5	chr15	-	3010	18	NIC	ENSMUSG00000078937.9	novel	2895	19	NA	NA	-1	-217	intron_retention	FALSE	canonical	3	54	junction_15	11.682062670406	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTTAGGTGCCTA	5215	False	NA	NA	False	AATAAA	-21	NA	89310067	89300824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309551_89310000
ES.1258.1	chr1	-	3007	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-68	-29	-68	29	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTCCATTTCCATG	NA	False	NA	8	True	AAAACA	-43	NA	128287469	128259297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.10	chr1	-	6576	14	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	2842	junction_5	208.619412259736	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287391	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.101	chr1	-	2130	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	505.506461108285	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345059	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304043_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.102	chr1	-	4644	15	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	1722	junction_11	124.098134308198	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345113	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.105	chr1	-	4794	15	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	1712	junction_7	139.374422301356	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345112	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.106	chr1	-	2223	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	260	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_15	501.503588111679	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128344836	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344579
ES.1258.108	chr1	-	2230	17	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	660.829660233066	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345063	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301433_128301523_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.109	chr1	-	3913	15	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	1	1	1	-1	intron_retention	FALSE	canonical	3	1712	junction_8	137.396807288456	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345095	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090
ES.1258.110	chr1	-	2115	15	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	516.828653562143	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345104	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294796_128297241_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.111	chr1	-	2135	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_15	490.928082535744	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345095	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344926
ES.1258.112	chr1	-	3958	17	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	773.377977507603	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345061	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301432_128301519_128301673_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.114	chr1	-	2095	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	501.503588111679	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345061	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344932
ES.1258.115	chr1	-	2127	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	505.664869256309	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATAGTGTTGTGTGACT	NA	False	NA	-6	True	AATAAA	-12	NA	128345055	128291445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319115_128333111_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.116	chr1	-	2157	17	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	658.293339700281	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATAGTGTTGTGTGACT	NA	False	NA	-6	True	AATAAA	-12	NA	128345055	128291445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314697_128314723_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.117	chr1	-	4233	15	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	33	-2	intron_retention	FALSE	canonical	3	1712	junction_7	140.078130531005	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATAGTGTTGTGTGACT	NA	False	NA	-6	True	AATAAA	-12	NA	128345063	128291445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.118	chr1	-	2392	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	506.445846616946	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	128345075	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301432_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.12	chr1	-	3715	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-27	0	intron_retention	FALSE	canonical	3	2842	junction_6	233.704143452072	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287428	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.120	chr1	-	1801	13	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-12949	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	559.956099469711	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	8145	False	NA	-7	True	AATAAA	-11	NA	128320173	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128320082
ES.1258.121	chr1	-	2106	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	60	-3	at_least_one_novel_splicesite	FALSE	canonical	1	52	junction_3	491.855516273721	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	128345036	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294764_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.122	chr1	-	4132	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	676.505806824056	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	128345082	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301432_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.125	chr1	-	2393	17	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	655.559014196091	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	128345115	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303352_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.128	chr1	-	4381	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	503.901030847218	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATAGTGTTGTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	128345061	128291446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128298768_128299127_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.13	chr1	-	2911	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	825.937684449469	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287420	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281282_128283241_128283397_128287195
ES.1258.131	chr1	-	5519	15	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	35	-4	intron_retention	FALSE	canonical	3	12	junction_6	519.173170158325	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGATAGTGTTGTGTGA	NA	False	NA	-8	True	AATAAA	-10	NA	128345061	128291447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.133	chr1	-	3055	16	NNC	ENSMUSG00000026356.16	novel	2144	2	NA	NA	35	-1244	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	493.856641366928	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGAATCCTTGAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	128345061	128292687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292895_128293107_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.134	chr1	-	3092	15	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	-3	1458	-3	-1458	5prime_fragment	FALSE	canonical	3	1712	junction_7	113.725973017493	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAGAAATGGCACATCA	NA	False	NA	NA	False	NA	NA	NA	128345099	128292901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.135	chr1	-	2092	2	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	10899	-1458	intron_retention	FALSE	canonical	3	2004	junction_1	0	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAGAAATGGCACATCA	3645	False	NA	NA	False	NA	NA	NA	128296325	128292901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128294770_128296101
ES.1258.137	chr1	-	1848	15	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	0	2699	0	-2699	5prime_fragment	FALSE	canonical	3	1712	junction_7	113.725973017493	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAACAATGGTTTTTT	NA	False	NA	NA	False	TTTAAA	-2	NA	128345096	128294142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.138	chr1	-	2367	10	NNC	ENSMUSG00000026356.16	novel	2144	2	NA	NA	13	505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	604.640572755602	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGTCATAATTGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	128345083	128302122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128303555_128303919_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.14	chr1	-	3173	16	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_7	848.624209464289	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287426	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269183_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.140	chr1	-	218	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	900	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAGAGCACCTGAGGTC	NA	False	NA	NA	False	NA	NA	NA	128304475	128304257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128304300_128304500
ES.1258.141	chr1	-	173	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	881	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGCAAACAAAAACAA	3430	False	NA	NA	False	NA	NA	NA	128324888	128324715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_128324700_128324900
ES.1258.15	chr1	-	2900	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	831.478568199446	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287408	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267103_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.16	chr1	-	6281	14	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	2842	junction_4	189.611187346274	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287423	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.17	chr1	-	2934	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	1086.54961335585	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287417	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272213_128272308_128272325_128273653_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.18	chr1	-	2767	16	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	856.194500228904	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287378	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266024_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.19	chr1	-	3126	16	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-14	0	intron_retention	FALSE	canonical	2	127	junction_3	811.341002428832	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287415	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262625_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.2	chr1	-	4405	16	FSM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	-35	-15	-18	12	multi-exon	FALSE	canonical	3	2842	junction_5	205.687940552889	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTCTACTCTTGATTA	NA	False	NA	-9	True	AATAAA	-29	NA	128287419	128259314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.20	chr1	-	2895	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_5	825.209156725584	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287420	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267120_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.21	chr1	-	5488	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	2842	junction_4	190.583957609131	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287408	128259326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.24	chr1	-	4906	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	2842	junction_6	242.645548531644	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287428	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.28	chr1	-	2643	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	17	junction_13	853.804255474677	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287385	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128281196_128281308_128283249_128283397_128287195
ES.1258.3	chr1	-	2903	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	829.240503412611	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTTCTACTCTTGAT	NA	False	NA	-11	True	AATAAA	-27	NA	128287391	128259316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267209_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.30	chr1	-	2818	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	806.981367403015	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287422	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195_128287276_128287387
ES.1258.31	chr1	-	2951	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	261	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	831.808231261118	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287123	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128286875
ES.1258.33	chr1	-	1376	7	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1307.01310245919	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287428	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266024_128283317_128283397_128287195
ES.1258.34	chr1	-	8367	14	NNC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	899.744750128955	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287404	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128273751_128276105_128276257_128276661_128276808_128277040_128278568_128278751_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.35	chr1	-	4619	15	NIC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	2842	junction_5	200.874313429862	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287413	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.36	chr1	-	3059	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	1086.65758446824	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287430	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128283692_128283814_128287195
ES.1258.38	chr1	-	2613	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	883.664139379034	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287390	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.4	chr1	-	2893	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	831.808231261118	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCATTTCTACTC	NA	False	NA	-16	True	AATAAA	-22	NA	128287387	128259321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283385_128287191
ES.1258.42	chr1	-	2898	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	831.478568199446	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287400	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266005_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.43	chr1	-	3636	16	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_2	1135.9482891204	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287386	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261392_128262499_128262656_128263466_128263603_128265852_128266015_128267120_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.44	chr1	-	2884	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	831.161903226441	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287384	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265860_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.46	chr1	-	9116	11	NNC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-6584	-1	intron_retention	TRUE	non_canonical	0	0	junction_10	995.242683972105	2342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	655	False	NA	-22	True	AATAAA	-16	NA	128280363	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128261394_128262499_128262656_128263466_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128278568_128278751
ES.1258.47	chr1	-	2877	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1107.36979870942	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287422	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263542_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277032_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.49	chr1	-	2912	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	823.174258207216	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287410	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263472_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.5	chr1	-	4204	10	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-2986	5	intron_retention	FALSE	canonical	3	2842	junction_6	269.589308136892	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCATTTCTACTC	4253	False	NA	-16	True	AATAAA	-22	NA	128276765	128259321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128273751_128276105_128276257_128276661
ES.1258.50	chr1	-	4394	16	NNC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-51	-1	intron_retention	FALSE	canonical	2	127	junction_2	798.062108415685	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287452	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128261394_128262499_128262625_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.51	chr1	-	2948	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	831.478568199446	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287428	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266027_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.52	chr1	-	2892	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	813.144042820828	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128287391	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261260_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.53	chr1	-	2475	7	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	875	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1275.39819490054	2337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	False	NA	-22	True	AATAAA	-16	NA	128270325	128259327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262643_128263466_128263603_128265852_128266015_128267086_128267216_128269021
ES.1258.54	chr1	-	2906	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	2	127	junction_3	793.646191538616	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287430	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262625_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.56	chr1	-	5450	15	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-18	1	intron_retention	FALSE	canonical	2	127	junction_3	848.114114385799	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287419	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262625_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128281308_128283249_128283397_128287195
ES.1258.57	chr1	-	2779	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-27	1	combination_of_known_splicesites	FALSE	canonical	2	72	junction_6	836.668934923884	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287428	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.59	chr1	-	3080	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	831.678947126684	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287425	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271365_128271994_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.6	chr1	-	7024	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	6	5	intron_retention	FALSE	canonical	3	2842	junction_6	248.934422968732	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCATTTCTACTC	NA	False	NA	-16	True	AATAAA	-22	NA	128287378	128259321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128276257_128276661_128276808_128277040_128277207_128279169_128281308_128283249_128283397_128287195
ES.1258.60	chr1	-	5117	15	NIC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	17	1	intron_retention	FALSE	canonical	3	2842	junction_5	204.028571928701	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287367	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.61	chr1	-	3027	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	1086.18464659799	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287414	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128286096_128286203_128287195
ES.1258.62	chr1	-	3088	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1066.35580641845	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGTTGGATTCATT	NA	False	NA	-23	True	AATAAA	-15	NA	128287384	128259328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128260483_128260681_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.64	chr1	-	2915	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	825.937684449469	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287401	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283241_128283397_128287195
ES.1258.65	chr1	-	2890	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1105.11893449303	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287399	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262508_128262656_128263466_128263603_128265852_128266015_128267092_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.68	chr1	-	3411	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	7	0	intron_retention	FALSE	canonical	2	17	junction_12	883.681330501868	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287377	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128281196_128281308_128283249_128283397_128287195
ES.1258.69	chr1	-	2776	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	829.425996924982	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287432	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279331_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.70	chr1	-	2889	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	831.682519053996	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287367	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279436_128281196_128281308_128283249_128283397_128287195
ES.1258.71	chr1	-	4368	16	NNC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_6	836.052858509689	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287428	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269147_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.73	chr1	-	2952	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	830.019418071047	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287453	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273744_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.74	chr1	-	2982	18	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1087.45135197239	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287403	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128271330_128271365_128271994_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.75	chr1	-	2776	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	854.501325660502	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287399	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.76	chr1	-	2868	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	829.240503412611	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287371	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267185_128268999_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.77	chr1	-	2657	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	831.682519053996	2343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287391	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279240_128281256_128281308_128283249_128283397_128287195
ES.1258.78	chr1	-	4602	31	Fusion	ENSMUSG00000026356.16_ENSMUSG00000026355.12	novel	2910	17	NA	NA	26	0	intron_retention	TRUE	canonical	0	0	junction_15	934.882393078877	3295	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128345070	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128291916_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333198_128341396_128341490_128343090_128343149_128344888
ES.1258.79	chr1	-	7404	13	NIC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-51	0	intron_retention	FALSE	canonical	3	2842	junction_5	206.345920456133	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287452	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.8	chr1	-	2927	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	830.818797933701	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTGGATTCATTTCT	NA	False	NA	-20	True	AATAAA	-18	NA	128287404	128259325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277220_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.80	chr1	-	4638	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	831.682519053996	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287391	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128280198_128280233_128281308_128283249_128283397_128287195
ES.1258.81	chr1	-	5938	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2842	junction_5	240.835588342431	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287404	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.82	chr1	-	2921	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	823.174258207216	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287424	128259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128259789_128261253_128261394_128262499_128262643_128263462_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.84	chr1	-	3680	16	FSM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	17	658	17	-658	multi-exon	FALSE	canonical	3	2842	junction_5	205.687940552889	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTAGGTTTCTTCGT	NA	False	NA	NA	False	NA	NA	NA	128287367	128259987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.85	chr1	-	2624	17	NNC	ENSMUSG00000026355.12	novel	4355	16	NA	NA	-18	-664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	813.144042820828	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATACCTGCTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	128287419	128259993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128260152_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.86	chr1	-	3209	16	FSM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	-35	1181	-18	-1181	multi-exon	FALSE	canonical	3	2842	junction_5	205.687940552889	2324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTCAGTGGTTATGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	128287419	128260510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.88	chr1	-	1319	7	ISM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	-8	16645	-8	-7212	5prime_fragment	FALSE	canonical	3	3087	junction_1	170.606190456918	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTCAGAGAACCTGA	NA	False	NA	NA	False	NA	NA	NA	128287409	128275971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ES.1258.89	chr1	-	2269	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	-74	-20	-65	20	multi-exon	FALSE	canonical	3	1712	junction_8	135.919976456737	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAATCTGATTTTATAA	NA	False	NA	16	True	AATAAA	-34	NA	128345170	128291423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.90	chr1	-	3847	15	NIC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-8	5	intron_retention	FALSE	canonical	3	1712	junction_7	134.96552847876	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTGTGACTTTATAGA	NA	False	NA	1	True	AATAAA	-19	NA	128345113	128291438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.95	chr1	-	3908	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	501.577759563648	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345096	128291443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.96	chr1	-	2136	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	505.033525839842	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345061	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314906_128316850_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.97	chr1	-	3144	17	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_7	655.233924712198	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345095	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128302583_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.98	chr1	-	2227	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	676.505806824056	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345095	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128303352_128303555_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ES.1258.99	chr1	-	1991	16	NNC	ENSMUSG00000026356.16	novel	2175	16	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	502.706435208462	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTGTGTGACTT	NA	False	NA	-5	True	AATAAA	-13	NA	128345112	128291444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128345087
ES.12580.1	chr15	-	1900	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-18	18	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGAGTGCACTGGGCT	1153	False	NA	NA	False	TATAAA	-29	NA	89314129	89310544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ES.12580.10	chr15	-	1533	9	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	27	0	intron_retention	FALSE	canonical	3	62	junction_3	111.432434685777	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1676	False	NA	NA	False	AATAAA	-23	NA	89313606	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89313031_89313251_89313361_89313579
ES.12580.12	chr15	-	1048	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	146.579856463935	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1677	False	NA	NA	False	AATAAA	-23	NA	89313605	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312916_89313031_89313251_89313361_89313579
ES.12580.13	chr15	-	1187	11	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	126.004761814782	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1677	False	NA	NA	False	AATAAA	-23	NA	89313605	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312054_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ES.12580.14	chr15	-	2707	2	FSM	ENSMUSG00000022617.16	ENSMUST00000115278.3	543	2	-2063	-101	-129	0	multi-exon	FALSE	canonical	3	407	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1857	False	NA	NA	False	AATAAA	-23	NA	89313425	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89310865_89311013
ES.12580.16	chr15	-	1893	10	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	8	junction_3	120.947187740031	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1190	False	NA	NA	False	AATAAA	-23	NA	89314092	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311658_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ES.12580.17	chr15	-	1213	11	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_8	133.472693836605	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1660	False	NA	NA	False	AATAAA	-23	NA	89313622	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312762_89312916_89313031_89313251_89313361_89313579
ES.12580.18	chr15	-	1184	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	114.705056558113	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1675	False	NA	NA	False	AATAAA	-23	NA	89313607	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ES.12580.2	chr15	-	2621	5	NIC	ENSMUSG00000022617.16	novel	2063	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	387	junction_3	8.52569645248997	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGACTTAAGTGACA	1177	False	NA	NA	False	AATAAA	-27	NA	89314105	89310565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89312219_89312336_89313031_89313251
ES.12580.21	chr15	-	1178	11	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	127.403453642356	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1654	False	NA	NA	False	AATAAA	-23	NA	89313628	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312668_89312748_89312916_89313031_89313251_89313361_89313579
ES.12580.22	chr15	-	2549	4	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	27	0	intron_retention	FALSE	canonical	3	387	junction_2	8.37987005998436	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1676	False	NA	NA	False	AATAAA	-23	NA	89313606	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89312219_89312336_89313031_89313251
ES.12580.23	chr15	-	1809	10	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_3	123.304601257853	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1211	False	NA	NA	False	AATAAA	-23	NA	89314071	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311595_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ES.12580.24	chr15	-	1529	9	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	259	junction_8	45.0192667088215	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1660	False	NA	NA	False	AATAAA	-23	NA	89313622	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ES.12580.3	chr15	-	1760	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1161	False	NA	NA	False	AATAAA	-23	NA	89314121	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
ES.12580.4	chr15	-	1972	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	-556	0	-87	0	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1084	False	NA	NA	False	AATAAA	-23	NA	89314198	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ES.12580.5	chr15	-	1244	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	137.528760628459	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
ES.12580.6	chr15	-	1248	11	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_8	106.87300875338	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1653	False	NA	NA	False	AATAAA	-23	NA	89313629	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312762_89312916_89313031_89313251_89313361_89313579
ES.12580.7	chr15	-	2075	9	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	259	junction_8	51.9488931547151	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1162	False	NA	NA	False	AATAAA	-23	NA	89314120	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89313031_89313251_89313361_89313579
ES.12580.8	chr15	-	1270	9	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_8	126.450027184655	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1677	False	NA	NA	False	AATAAA	-23	NA	89313605	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313579
ES.12580.9	chr15	-	1713	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	-6	0	3	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1174	False	NA	NA	False	AATAAA	-23	NA	89314108	89310569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ES.12581.1	chr15	+	184	1	FSM	ENSMUSG00000079242.3	ENSMUST00000168646.2	1280	1	904	192	904	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAGCCTAGGGAGTGG	NA	False	NA	NA	False	NA	NA	NA	89314695	89314879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89314700_89314900
ES.12582.1	chr15	+	177	1	Intergenic	novelGene_10510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89318182	89318359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89318200_89318400
ES.12583.1	chr15	+	3406	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	134	2018	134	-2018	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTTTTAAGGTGGTG	1392	False	NA	19	True	AATAAA	-19	NA	89338249	89346653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.10	chr15	+	3138	13	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	285	-2021	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_5	25.6074804609035	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1543	False	NA	16	True	AATAAA	-16	NA	89338400	89346650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89341987_89342100_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.11	chr15	+	5236	7	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	293	-2022	intron_retention	FALSE	canonical	1	2	junction_5	35.0856095856977	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGCTGTTTTTAAGGT	1551	False	NA	15	True	AATAAA	-15	NA	89338408	89346649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89343118_89343292_89343384
ES.12583.12	chr15	+	4966	12	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	293	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	34.5712822110926	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTTGCTTATCTCA	1551	False	NA	9	True	AATAAA	-16	NA	89338408	89348669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841_89348087_89348307
ES.12583.13	chr15	+	3136	11	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	293	-2021	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.0144791440412	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1551	False	NA	16	True	AATAAA	-16	NA	89338408	89346650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344854_89344926_89345562_89345662_89345841
ES.12583.15	chr15	+	5157	13	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	296	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	26.8369562771605	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGCTTATCTCAGT	1554	False	NA	11	True	AATAAA	-18	NA	89338411	89348671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89341452_89341556_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.16	chr15	+	3330	10	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	296	-2024	intron_retention	FALSE	canonical	1	2	junction_5	29.3816941413746	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	1554	False	NA	13	True	AATAAA	-13	NA	89338411	89346647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89343118_89343292_89343384_89343495_89344578_89344926_89345562_89345662_89345841
ES.12583.17	chr15	+	5380	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1073	3	-56	-3	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTGTTGCTTATCTC	2331	False	NA	8	True	AATAAA	-15	NA	89339188	89348668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.18	chr15	+	3237	10	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	-10	-2024	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	28.7779922771929	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	2377	False	NA	13	True	AATAAA	-13	NA	89339234	89346647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.19	chr15	+	3311	11	ISM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	1123	2022	-6	-2022	3prime_fragment	FALSE	canonical	3	72	junction_10	9.60416576283438	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGCTGTTTTTAAGGT	2381	False	NA	15	True	AATAAA	-15	NA	89339238	89346649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.2	chr15	+	5200	13	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	26.8369562771605	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGCTTATCTCAGT	1395	False	NA	11	True	AATAAA	-18	NA	89338252	89348671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841_89348087_89348307
ES.12583.20	chr15	+	3485	1	Genic_Genomic	ENSMUSG00000022619.6	novel	NA	NA	NA	NA	6464	522	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAAAAAAACCCAA	8851	False	NA	NA	False	NA	NA	NA	89345708	89349193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_89345700_89349200
ES.12583.3	chr15	+	5422	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	137	-1	137	1	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGCTTATCTCAGTC	1395	False	NA	12	True	AATAAA	-19	NA	89338252	89348672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.4	chr15	+	4453	11	NIC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	167	-2022	intron_retention	FALSE	canonical	3	60	junction_1	12.898061869909	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGCTGTTTTTAAGGT	1425	False	NA	15	True	AATAAA	-15	NA	89338282	89346649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.5	chr15	+	3322	12	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	167	-2021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.6644594028075	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTTTTTAAGGTG	1425	False	NA	16	True	AATAAA	-16	NA	89338282	89346650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343447_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.6	chr15	+	6915	11	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	194	522	intron_retention	FALSE	non_canonical	0	0	junction_5	35.9282618560932	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAAAAAAACCCAA	1452	False	NA	NA	False	NA	NA	NA	89338309	89349193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89341997_89342103_89342574_89342944_89343021_89343118_89344687_89344854_89344926_89345562_89348086_89348306
ES.12583.7	chr15	+	5164	13	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	276	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_5	25.6074804609035	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTGTGTTGCTTATCT	1534	False	NA	7	True	AATAAA	-14	NA	89338391	89348667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89341987_89342100_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12583.8	chr15	+	3251	12	NNC	ENSMUSG00000022619.6	novel	5558	12	NA	NA	277	-2022	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	26.65636853495	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGCTGTTTTTAAGGT	1535	False	NA	15	True	AATAAA	-15	NA	89338392	89346649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89338489_89339386_89339485_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ES.12584.1	chr15	-	1866	1	Antisense	novelGene_ENSMUSG00000022619.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCCGGGCACAGTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	89338651	89336785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_89336800_89338700
ES.12585.1	chr15	+	5041	3	NIC	ENSMUSG00000084915.3	novel	1886	4	NA	NA	5	4444	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGAGGGCTTGGGTTG	4691	False	NA	NA	False	ACTAAA	-20	NA	89360459	89373494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89360489_89362072_89362213_89368622
ES.12585.2	chr15	+	1951	3	NNC	ENSMUSG00000084915.3	novel	1886	4	NA	NA	10	-2910	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTTATTTTATTTTG	4696	False	NA	NA	False	NA	NA	NA	89360464	89366075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89360975_89364584_89364677_89364726
ES.12586.1	chr15	-	3466	3	NIC	ENSMUSG00000022620.15	novel	2699	7	NA	NA	-51	-14	intron_retention	FALSE	canonical	3	84	junction_1	3	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89360367	89356692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89358338_89358430_89359209_89359324
ES.12586.10	chr15	-	3498	8	NNC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_7	27.3749475817222	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89361609	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360823_89361352
ES.12586.11	chr15	-	2557	7	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	-36	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.2745623366089	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360352	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357761_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710
ES.12586.12	chr15	-	3183	4	NIC	ENSMUSG00000022620.15	novel	2699	7	NA	NA	-39	2	intron_retention	FALSE	canonical	3	72	junction_1	7.48331477354788	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360355	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357975_89358209_89358338_89358430_89359209_89359324
ES.12586.14	chr15	-	2693	6	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	263	2	intron_retention	FALSE	canonical	3	62	junction_4	9.68297474952816	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360053	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358913_89358989_89359209_89359324
ES.12586.15	chr15	-	3359	3	NIC	ENSMUSG00000022620.15	novel	2699	7	NA	NA	-32	2	intron_retention	FALSE	canonical	3	62	junction_2	14	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360348	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89359209_89359324_89359566_89359710
ES.12586.16	chr15	-	3232	8	NNC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.8640740343521	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89361579	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89357761_89357871_89357975_89358209_89358338_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360823_89361352
ES.12586.19	chr15	-	3341	3	NIC	ENSMUSG00000022620.15	novel	2699	7	NA	NA	-33	2	intron_retention	FALSE	canonical	3	68	junction_2	8	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360349	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89358338_89358430_89358556_89358742
ES.12586.2	chr15	-	3645	7	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	7	-14	intron_retention	FALSE	canonical	3	8	junction_6	26.7581763205193	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89361607	89356692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89359209_89359324_89359566_89359710_89360859_89361352
ES.12586.20	chr15	-	3502	8	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	3	2	intron_retention	FALSE	canonical	3	8	junction_7	25.1266181324807	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89361611	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89359209_89359324_89359566_89359710_89360859_89361352
ES.12586.3	chr15	-	3469	9	FSM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	9	14	-5	-14	multi-exon	FALSE	canonical	3	8	junction_8	23.5358768691545	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89361619	89356692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360859_89361352
ES.12586.5	chr15	-	3673	1	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	-49	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89360365	89356692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89356700_89360400
ES.12586.6	chr15	-	3552	8	NIC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	23	-14	intron_retention	FALSE	canonical	3	8	junction_7	24.7831410768016	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTACAAAGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	89361591	89356692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360859_89361352
ES.12586.8	chr15	-	3425	8	NNC	ENSMUSG00000022620.15	novel	3492	9	NA	NA	35	2	intron_retention	FALSE	canonical	1	1	junction_4	33.1619403189	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89361579	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89359068_89359209_89359324_89359566_89359710_89360859_89361352
ES.12586.9	chr15	-	3119	2	NIC	ENSMUSG00000022620.15	novel	2699	7	NA	NA	-33	2	intron_retention	FALSE	canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89360349	89356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_89359209_89359710
ES.12587.1	chr15	-	176	1	Intergenic	novelGene_10511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGTAGAA	5881	False	NA	NA	False	NA	NA	NA	89410780	89410604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89410600_89410800
ES.12588.1	chr15	-	157	1	Intergenic	novelGene_10512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATCTTTAAAAAGAAA	5697	False	NA	NA	False	NA	NA	NA	89410964	89410807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89410800_89411000
ES.12589.1	chr15	-	177	1	Intergenic	novelGene_10513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGCTGAGCGTGGT	4166	False	NA	NA	False	NA	NA	NA	89425727	89425550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89425600_89425700
ES.1259.1	chr1	-	1859	2	FSM	ENSMUSG00000045382.7	ENSMUST00000052172.7	1805	2	-56	2	-53	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTGTGCTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	128520083	128515937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_128517639_128519925
ES.12590.1	chr15	-	144	1	Intergenic	novelGene_10514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATTAAAAAATA	3203	False	NA	NA	False	NA	NA	NA	89426690	89426546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_89426500_89426700
ES.12591.1	chr15	-	3553	2	Antisense	novelGene_ENSMUSG00000022623.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTACAGAGTTCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	89430881	89426767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_89427434_89427994
ES.12592.1	chr15	+	3869	2	ISM	ENSMUSG00000022623.18	ENSMUST00000229559.2	4161	11	24780	-1938	915	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTCAGTTTGTGCTT	2682	False	NA	NA	False	NA	NA	NA	89432743	89444464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_89434086_89441937
ES.12592.2	chr15	+	6435	1	NIC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	-2878	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGTCTCAGTTTGTG	7965	False	NA	NA	False	NA	NA	NA	89438026	89444461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89438000_89444500
ES.12592.3	chr15	+	2709	2	NNC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	143	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGTCTCAGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	89441047	89444461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89441233_89441937
ES.12592.4	chr15	+	2102	2	NNC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	272	-479	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	89441176	89443983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_89441233_89441937
ES.12592.5	chr15	+	1591	1	NIC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	462	431	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAGGAACAAATA	NA	False	NA	NA	False	NA	NA	NA	89441366	89442957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_89441400_89443000
ES.12593.1	chr15	-	3941	1	Antisense	novelGene_ENSMUSG00000022623.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89441455	89437514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_89437500_89441500
ES.12594.1	chr15	-	1616	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	28	-4	-5	4	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTCAGTTACCTTTC	17	True	NA	0	True	AATAAA	-21	NA	89476098	89466731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
ES.12594.2	chr15	-	1649	9	NNC	ENSMUSG00000022621.17	novel	1640	9	NA	NA	-13342	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.1021407573801	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAAGGGTCTCAGTT	NA	False	NA	-7	True	AATAAA	-14	NA	89489468	89466738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89489352
ES.12594.3	chr15	-	1738	6	FSM	ENSMUSG00000022621.17	ENSMUST00000171580.8	867	6	-24	-847	1	1	multi-exon	FALSE	canonical	3	9	junction_4	16.7880910171466	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAAGGGTCTCAGTT	1378	False	NA	-7	True	AATAAA	-14	NA	89476066	89466738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_89467634_89467801_89467886_89468112_89468594_89470461_89470542_89474475_89474630_89476022
ES.12595.1	chr15	+	173	1	Intergenic	novelGene_10515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTTTTACTAGTCAA	4219	False	NA	NA	False	NA	NA	NA	89527991	89528164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89528000_89528200
ES.12596.1	chr15	+	191	1	Intergenic	novelGene_10516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATCTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	89995797	89995988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_89995800_89996000
ES.12597.1	chr15	-	169	1	Intergenic	novelGene_10517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATGTTTGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	90045309	90045140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_90045100_90045300
ES.12598.1	chr15	+	6697	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-41	-12	-41	12	multi-exon	FALSE	canonical	3	65	junction_2	7.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTGGTAAATTAATTC	NA	False	NA	NA	False	AATAAA	-27	NA	90108472	90117686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111526
ES.12598.2	chr15	+	5261	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-40	1423	-40	-1423	multi-exon	FALSE	canonical	3	65	junction_2	7.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGTTTTTGAAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	90108473	90116251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111526
ES.12598.3	chr15	+	3574	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-63	2946	-25	-2946	multi-exon	FALSE	canonical	2	7	junction_2	36.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGTTGTTTGTTCCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	90108488	90114728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111675
ES.12598.4	chr15	+	3707	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-8	2945	-8	-2945	multi-exon	FALSE	canonical	3	65	junction_2	7.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTTGTTTGTTCCTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	90108505	90114729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111526
ES.12598.5	chr15	+	6503	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-46	0	-8	0	multi-exon	FALSE	canonical	2	7	junction_2	36.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	90108505	90117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111675
ES.12598.6	chr15	+	5527	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	-8	1125	-8	-1125	multi-exon	FALSE	canonical	3	65	junction_2	7.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCGCCTGTGTTAATT	NA	False	NA	NA	False	AGTAAA	-40	NA	90108505	90116549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111526
ES.12598.7	chr15	+	5265	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	-46	1238	-8	-1238	multi-exon	FALSE	canonical	2	7	junction_2	36.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTAGGTGATGACAGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	90108505	90116436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_90108812_90109859_90110058_90111675
ES.12598.8	chr15	+	3400	3	NNC	ENSMUSG00000075470.3	novel	6457	3	NA	NA	11	-2944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTTGTTTGTTCCTAATC	NA	False	NA	NA	False	AATAAA	-19	NA	90108524	90114730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_90108812_90109999_90110058_90111675
ES.12598.9	chr15	+	3456	1	ISM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	5512	193	5474	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGATTTTTAAATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	90114025	90117481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_90114000_90117500
ES.12599.1	chr15	+	226	1	Intergenic	novelGene_10518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATCTAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	90198813	90199039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_90198800_90199000
ES.126.1	chr1	-	2866	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	-17	5	combination_of_known_splicesites	FALSE	canonical	2	18	junction_6	419.259429394024	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTTTTTGTAAGCAAA	9674	False	NA	-4	True	ATTAAA	-20	NA	13660116	13634916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.10	chr1	-	4377	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	22	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.264974923437	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	9713	False	NA	-7	True	AATAAA	-16	NA	13660077	13635003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13638116_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.11	chr1	-	2796	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	0	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.264974923437	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTGTTTCCTGAACAA	9691	False	NA	-8	True	AATAAA	-15	NA	13660099	13635004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639718_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.12	chr1	-	4724	3	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	17025	83	6913	-83	intron_retention	FALSE	canonical	3	1272	junction_2	42	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTGTTTCCTGAACAA	NA	False	NA	-8	True	AATAAA	-15	NA	13643109	13635004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13636621_13639694_13639856_13640162
ES.126.13	chr1	-	2744	12	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	16	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.260072349789	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTGTTTCCTGAACAA	9707	False	NA	-8	True	AATAAA	-15	NA	13660083	13635004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636045_13636104_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.14	chr1	-	5191	5	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	14742	83	4630	-83	3prime_fragment	FALSE	canonical	3	1264	junction_4	48.4148737476408	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTGTTTCCTGAACAA	NA	False	NA	-8	True	AATAAA	-15	NA	13645392	13635004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227
ES.126.18	chr1	-	2734	12	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	-5	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.260072349789	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTGTTTCCTGAACAA	9686	False	NA	-8	True	AATAAA	-15	NA	13660104	13635004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636451_13636541_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.19	chr1	-	2827	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	-11	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	404.666096924366	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGCTGTTTCCTGAAC	9680	False	NA	-10	True	AATAAA	-13	NA	13660110	13635006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648377_13649669_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.2	chr1	-	3027	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	-87	-2	-87	2	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTATTTTTTGTAAGC	9569	False	NA	-7	True	ATTAAA	-17	NA	13660221	13634919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.21	chr1	-	2487	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	45	406	10	-406	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGTCCTCGCACCCT	9701	False	NA	NA	False	AGTAAA	-18	NA	13660089	13635327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.22	chr1	-	2293	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	16	629	16	-629	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTATTTGGGAAACGAA	9672	False	NA	NA	False	ATTAAA	-19	NA	13660118	13635550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.23	chr1	-	1833	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	6	-1005	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_3	397.255635579912	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGTGTGCTTTATT	9697	False	NA	-4	True	NA	NA	NA	13660093	13635926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640248_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.24	chr1	-	1909	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	23	1006	-12	-1006	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTTGTGTGCTTTAT	9679	False	NA	-5	True	NA	NA	NA	13660111	13635927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.26	chr1	-	2530	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	517	-1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	399.793996953431	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTTGTAAAAAT	1168	False	NA	-29	True	NA	NA	NA	13659582	13635951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13658649
ES.126.27	chr1	-	1408	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	14	1516	14	-1516	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCCTGTTCCTGC	9670	False	NA	-1	True	AATACA	-20	NA	13660120	13636437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.29	chr1	-	1290	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	33	-1521	combination_of_known_splicesites	FALSE	canonical	2	18	junction_6	419.259429394024	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGCTGTTGTCCTGTT	9724	False	NA	-6	True	AATACA	-15	NA	13660066	13636442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.3	chr1	-	2839	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	403.383204905708	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTATTTTTTGTAA	9729	False	NA	-9	True	ATTAAA	-15	NA	13660061	13634921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650006_13651242_13651311_13659823
ES.126.30	chr1	-	1270	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	-10	-1521	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	416.09988117171	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGCTGTTGTCCTGTT	9681	False	NA	-6	True	AATACA	-15	NA	13660109	13636442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13651246_13651311_13659823
ES.126.32	chr1	-	1328	10	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	7	-1522	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	422.096911229087	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTGCTGTTGTCCTGT	9698	False	NA	-7	True	AATACA	-14	NA	13660092	13636443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642168_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.33	chr1	-	2591	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	0	-1523	intron_retention	FALSE	canonical	3	1226	junction_5	65.5118498375355	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTGCTGTTGTCCTG	9691	False	NA	-8	True	AATACA	-13	NA	13660099	13636444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13651311_13659823
ES.126.34	chr1	-	998	1	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	2	-10758	mono-exon	FALSE	NA	NA	NA	NA	NA	496	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCATTTTGTCTCCTCTC	9693	False	NA	NA	False	ATTAAA	-20	NA	13660097	13659099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13659100_13660100
ES.126.4	chr1	-	2822	12	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.260072349789	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTATTTTTTGTAA	9678	False	NA	-9	True	ATTAAA	-15	NA	13660112	13634921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13635623_13635716_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.6	chr1	-	2819	12	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.260072349789	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGAGTCTATTTTTT	9673	False	NA	-13	True	ATTAAA	-11	NA	13660117	13634925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13635638_13635735_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.7	chr1	-	2969	12	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	10	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	520.216277337236	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTCCTTCACTGTAAT	9701	False	NA	7	True	AATAAA	-30	NA	13660089	13634989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13645201_13645346_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.8	chr1	-	5751	9	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	11	-79	intron_retention	FALSE	canonical	3	1226	junction_5	69.0913118633595	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTCCTGAACAATTCC	9702	False	NA	-4	True	AATAAA	-19	NA	13660088	13635000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13649791_13649913_13650036_13651246_13651311_13659823
ES.126.9	chr1	-	2792	11	NNC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	12	-79	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	406.127122955362	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTCCTGAACAATTCC	9703	False	NA	-4	True	AATAAA	-19	NA	13660087	13635000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642274_13646586_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ES.1260.1	chr1	+	2703	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATTTTTTGGTCGTCTG	NA	False	NA	NA	False	NA	NA	NA	128885730	128888433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_128885700_128888400
ES.12600.1	chr15	-	3293	20	FSM	ENSMUSG00000052560.16	ENSMUST00000064391.12	3366	20	71	2	10	-2	multi-exon	FALSE	canonical	0	0	junction_15	2.20676371507754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATAGCTTGCCTTATGTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	90563564	90371687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697_90393826_90400110_90400293_90406110_90406158_90424434_90424497_90425459_90425514_90436176_90436253_90452451_90452494_90453662_90453768_90456147_90456252_90469080_90469145_90486015_90486093_90499313_90499354_90503834_90503939_90532780_90532828_90533445_90533487_90563370
ES.12600.2	chr15	-	3143	20	NNC	ENSMUSG00000052560.16	novel	3366	20	NA	NA	-36	-244	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2.28447730675902	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGTTCTTTTTTGTG	NA	False	NA	NA	False	AATACA	-14	NA	90563671	90371929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697_90393826_90400110_90400293_90406110_90406158_90424449_90424497_90425459_90425514_90436176_90436253_90452451_90452494_90453662_90453768_90456147_90456252_90469080_90469145_90486015_90486093_90499313_90499354_90503834_90503939_90532780_90532828_90533445_90533487_90563370
ES.12601.1	chr15	-	526	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-89	-59	-89	59	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAACTATGGCAAGGGAA	NA	False	NA	NA	False	AATAAA	-41	NA	90648948	90648422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_90648400_90648900
ES.12602.1	chr15	-	6277	33	NIC	ENSMUSG00000022629.18	novel	6439	37	NA	NA	-65	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	3.77478786655621	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCTTTTTCTAATTG	9413	False	NA	NA	False	AATAAA	-26	NA	90934216	90817477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.10	chr15	-	4054	26	NNC	ENSMUSG00000022629.18	novel	6142	33	NA	NA	-17	-12878	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	4.49639855884685	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTCTCTTCACTTTTG	9564	False	NA	NA	False	AATAAA	-30	NA	90934065	90839325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_90839603_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.11	chr15	-	4047	27	NNC	ENSMUSG00000022629.18	novel	6142	33	NA	NA	0	-12882	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.12578468520218	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACATATTCTCTTCACT	9588	False	NA	NA	False	AATAAA	-26	NA	90934041	90839329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_90839603_90840497_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.12	chr15	-	4912	25	ISM	ENSMUSG00000022629.18	ENSMUST00000109288.9	6142	33	119	21851	9	-12882	5prime_fragment	FALSE	canonical	2	8	junction_12	3.93678344449995	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACATATTCTCTTCACT	9597	False	NA	NA	False	AATAAA	-26	NA	90934032	90839329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.2	chr15	-	5704	29	NIC	ENSMUSG00000022629.18	novel	6142	33	NA	NA	-34	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	4.69299847580175	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCTTTTTCTAATTG	9547	False	NA	NA	False	AATAAA	-26	NA	90934082	90817477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.3	chr15	-	6019	10	ISM	ENSMUSG00000022629.18	ENSMUST00000109287.4	5988	33	86622	-6	3206	0	3prime_fragment	FALSE	canonical	1	1	junction_7	4.84831649539365	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAGTCTTTTTCTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	90847399	90817478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90840497_90840713_90843279_90843335_90843890
ES.12602.4	chr15	-	6459	24	NNC	ENSMUSG00000022629.18	novel	6333	37	NA	NA	-14568	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.69449042250689	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTAGTCTTTTTCTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	90865173	90817479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90838526_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997
ES.12602.5	chr15	-	6121	34	NIC	ENSMUSG00000022629.18	novel	6333	37	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	4.40385506050544	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTAGTCTTTTTCTA	9586	False	NA	NA	False	AATAAA	-22	NA	90934043	90817481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.7	chr15	-	6216	34	NIC	ENSMUSG00000022629.18	novel	6439	37	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	4.67826186397814	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTGTTTCTATTATAC	9586	False	NA	NA	False	AATAAA	-9	NA	90934043	90817494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90835448_90835578_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.8	chr15	-	7043	25	ISM	ENSMUSG00000022629.18	ENSMUST00000109288.9	6142	33	119	19720	9	-10751	5prime_fragment	FALSE	canonical	2	8	junction_12	3.93678344449995	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCCTATCTGAGTTT	9597	False	NA	NA	False	AATAAA	-17	NA	90934032	90837198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ES.12602.9	chr15	-	4054	4	NNC	ENSMUSG00000022629.18	novel	750	7	NA	NA	5869	-10753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18241233033047	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTCCTATCTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	90844736	90837200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_90840713_90843279_90843335_90843890_90843952_90844310
ES.12603.1	chr15	+	2798	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	-35	-722	-35	722	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCTTGATAATTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	91083661	91145819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
ES.12603.2	chr15	+	2614	12	NIC	ENSMUSG00000078932.9	novel	2041	13	NA	NA	-35	715	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	8.52221210564216	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTTCTCTTGATA	NA	False	NA	NA	False	ATTAAA	-11	NA	91083661	91145812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
ES.12603.3	chr15	+	2343	9	ISM	ENSMUSG00000078932.9	ENSMUST00000109284.3	1929	12	7838	-726	7838	717	3prime_fragment	FALSE	canonical	2	14	junction_5	3.52668399491647	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTCTCTTGATAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	91123618	91145814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
ES.12603.4	chr15	+	4773	1	Genic_Genomic	ENSMUSG00000078932.9	novel	NA	NA	NA	NA	28308	3764	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAAAGCCTTCTTGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	91144088	91148861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_91144100_91148900
ES.12604.1	chr15	-	5506	7	NNC	ENSMUSG00000036298.11	novel	6536	10	NA	NA	22058	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.74535599249993	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTATGCTCTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	91274362	91151899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_91156584_91160265_91160419_91160569_91160692_91205773_91205900_91227904_91228026_91234169_91234334_91274226
ES.12605.1	chr15	+	4299	1	Intergenic	novelGene_10519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAATACAAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	91433023	91437322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_91433000_91437300
ES.12606.1	chr15	-	4593	1	NIC	ENSMUSG00000036298.11	novel	6536	10	NA	NA	544	-25833	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	91456853	91452260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_91452300_91456900
ES.12607.1	chr15	-	238	2	Intergenic	novelGene_10520	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTTAATCTGTTTTAT	NA	False	NA	NA	False	AATAAA	-36	NA	91518580	91515982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_91516176_91518535
ES.12608.1	chr15	+	7140	44	ISM	ENSMUSG00000036273.16	ENSMUST00000060642.7	8275	51	26801	92	26801	2	3prime_fragment	TRUE	canonical	0	0	junction_4	1.84938561414614	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGACTCTTTCATATC	NA	False	NA	NA	False	AATAAA	-20	NA	91584178	91700231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_91584206_91584548_91584692_91584779_91584860_91586372_91586480_91589308_91589439_91593466_91593592_91596958_91597066_91607294_91607440_91607968_91608109_91610135_91610265_91610339_91610511_91613118_91613378_91615667_91615857_91618191_91618311_91620789_91620860_91621305_91621524_91622927_91623179_91623464_91623614_91626453_91626548_91629900_91630088_91631854_91632037_91633863_91634094_91634426_91634555_91636344_91636564_91639992_91640195_91641182_91641272_91648834_91649023_91649879_91650035_91651515_91651663_91657024_91657217_91659098_91659246_91662628_91662730_91664021_91664213_91671168_91671330_91680199_91680371_91681624_91681726_91686041_91686237_91687488_91687683_91689099_91689173_91690945_91691131_91695194_91695348_91696394_91696604_91698864_91698937_91699616
ES.12608.2	chr15	+	2860	16	NIC	ENSMUSG00000036273.16	novel	3801	4	NA	NA	-65	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.11239726903398	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACTCTTTCATATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	91656482	91700233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_91656581_91657024_91657217_91659098_91659246_91662628_91662730_91664021_91664213_91671168_91671330_91680199_91680371_91681624_91681726_91686041_91686237_91687488_91687683_91689099_91689173_91690945_91691131_91695194_91695348_91696394_91696604_91698864_91698937_91699616
ES.12608.3	chr15	+	2675	15	NIC	ENSMUSG00000036273.16	novel	3801	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.05162951662072	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGAGACTCTTTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	91656516	91700229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_91656581_91657024_91657217_91662628_91662730_91664021_91664213_91671168_91671330_91680199_91680371_91681624_91681726_91686041_91686237_91687488_91687683_91689099_91689173_91690945_91691131_91695194_91695348_91696394_91696604_91698864_91698937_91699616
ES.12609.1	chr15	-	175	1	Intergenic	novelGene_10521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATGATACTGAAG	NA	False	NA	NA	False	NA	NA	NA	91679929	91679754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_91679800_91679900
ES.1261.1	chr1	-	1442	5	Antisense	novelGene_ENSMUSG00000042581.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTCCCACTTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	130114355	130083642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_130084580_130093630_130093788_130094415_130094503_130109805_130109926_130114214
ES.1261.2	chr1	-	1452	5	Antisense	novelGene_ENSMUSG00000042581.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACTTCTTCCCACTTT	NA	False	NA	NA	False	AATAAA	-10	NA	130114432	130083646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_130084580_130093630_130093788_130094415_130094503_130107215_130107273_130114214
ES.1261.3	chr1	-	1109	6	Antisense	novelGene_ENSMUSG00000042581.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCATTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	130114437	130103274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_130103704_130104321_130104493_130107215_130107273_130109421_130109527_130109801_130109926_130114214
ES.12610.1	chr15	+	175	1	Intergenic	novelGene_10522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAACCATAATTC	NA	False	NA	NA	False	NA	NA	NA	92241061	92241236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_92241100_92241200
ES.12611.1	chr15	+	4466	1	NIC	ENSMUSG00000097068.3	novel	1619	4	NA	NA	14	-29265	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	92242253	92246719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_92242300_92246700
ES.12612.1	chr15	-	224	1	Intergenic	novelGene_10523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGATCATACCCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	92298013	92297789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_92297800_92298000
ES.12613.1	chr15	-	222	1	Intergenic	novelGene_10524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTCCCAATCACAAAAG	NA	False	NA	NA	False	AAAAAG	-27	NA	92500948	92500726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_92500700_92500900
ES.12614.1	chr15	+	175	1	Intergenic	novelGene_10525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92836995	92837170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_92837000_92837200
ES.12615.1	chr15	+	1201	2	NNC	ENSMUSG00000109770.2	novel	594	2	NA	NA	-297	227	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCGTTTGTAATTGA	NA	False	NA	NA	False	AATAAA	-10	NA	92899407	92900745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_92899916_92900052
ES.12615.2	chr15	+	3153	6	NNC	ENSMUSG00000109770.2	novel	198	2	NA	NA	-149	72333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.85472369909914	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATCTAGAGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	92900063	92977231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_92900346_92904833_92904982_92930325_92930436_92964717_92964790_92969556_92969614_92974747
ES.12615.3	chr15	+	2549	1	Intergenic	novelGene_10526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	92906822	92909371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_92906800_92909400
ES.12616.1	chr15	-	937	4	Antisense	novelGene_ENSMUSG00000097989.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTCAAGAGCGTGGTC	NA	False	NA	NA	False	AATAAA	-15	NA	93113318	93077749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_93078384_93101763_93101915_93111142_93111228_93113251
ES.12617.1	chr15	+	154	1	Intergenic	novelGene_10527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	93124262	93124416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93124300_93124400
ES.12618.1	chr15	+	173	1	Intergenic	novelGene_10528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93144401	93144574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93144400_93144600
ES.12619.1	chr15	+	173	1	Intergenic	novelGene_10529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAAATTGTTAT	NA	False	NA	NA	False	NA	NA	NA	93166414	93166587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93166400_93166600
ES.1262.1	chr1	-	168	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	130116011	130115843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_130115800_130116000
ES.12620.1	chr15	+	2673	1	Intergenic	novelGene_10530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTCAAATGATCTCCA	NA	False	NA	NA	False	NA	NA	NA	93230237	93232910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93230200_93232900
ES.12621.1	chr15	-	6643	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	-91	-2125	-91	13	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTACCAGGC	NA	False	NA	3	True	AATAAA	-26	NA	93173151	93137609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
ES.12621.10	chr15	-	2273	8	FSM	ENSMUSG00000036197.17	ENSMUST00000057896.5	1891	8	-11	-371	-1	371	multi-exon	FALSE	canonical	3	19	junction_7	17.2827624398133	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGACTGTGGAAAATGC	NA	False	NA	NA	False	AATAAA	-23	NA	93173043	93141964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93163751_93163845_93172756
ES.12621.11	chr15	-	2174	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	17	2236	-1	365	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTAAAAGGACTGTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	93173043	93141970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
ES.12621.12	chr15	-	1436	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	17	2974	-1	-373	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGTAAGTTGAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93173043	93142708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
ES.12621.13	chr15	-	3134	4	ISM	ENSMUSG00000036197.17	ENSMUST00000057896.5	1891	8	-8	12151	2	-12151	5prime_fragment	FALSE	canonical	3	19	junction_3	13.490737563232	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAACATGGTTTGT	NA	False	NA	NA	False	AATACA	-10	NA	93173040	93154486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_93157072_93159627_93159800_93163751_93163845_93172756
ES.12621.14	chr15	-	2207	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-136	-395	-9	395	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATTCTTCAGTGTTGT	NA	False	NA	0	True	AGTAAA	-25	NA	93234825	93181763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ES.12621.15	chr15	-	1923	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-180	-67	-53	67	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTCTATCTTATTCTC	NA	False	NA	66	True	AATACA	-12	NA	93234869	93182091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ES.12621.16	chr15	-	1885	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	-13	-2	-13	-1	multi-exon	TRUE	canonical	3	44	junction_2	48.2875501552937	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	93234829	93182159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
ES.12621.17	chr15	-	1907	5	NNC	ENSMUSG00000022634.10	novel	1870	5	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.6397236175573	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCATTTTGTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	93234798	93182159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93183504_93184290_93184444_93232425_93232549_93234220_93234347_93234637
ES.12621.18	chr15	-	1718	5	NNC	ENSMUSG00000022634.10	novel	1870	5	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.2274055380746	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTTTTGCATTTTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	93234830	93182163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637_93234712_93234805
ES.12621.19	chr15	-	1682	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-127	121	0	-118	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTCTAGTTCCAGATAC	NA	False	NA	NA	False	AATAAA	-21	NA	93234816	93182279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ES.12621.2	chr15	-	6635	8	FSM	ENSMUSG00000036197.17	ENSMUST00000057896.5	1891	8	-28	-4716	0	3	multi-exon	FALSE	canonical	3	19	junction_7	17.2827624398133	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTAAATTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	93173060	93137619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93163751_93163845_93172756
ES.12621.20	chr15	-	1288	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	-181	569	-54	-566	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTTTTGACATGT	NA	False	NA	-3	True	AATAAA	-19	NA	93234870	93182727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ES.12621.21	chr15	-	1332	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	-28	566	-28	-566	multi-exon	FALSE	canonical	3	44	junction_2	48.2875501552937	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTTTTGACATGT	NA	False	NA	-3	True	AATAAA	-19	NA	93234844	93182727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
ES.12621.4	chr15	-	6471	7	NNC	ENSMUSG00000036197.17	novel	4427	7	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.3697605664328	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTAAATTTTTTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	93173016	93137620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156971_93157072_93159627_93159800_93172756
ES.12621.5	chr15	-	6528	8	Fusion	ENSMUSG00000022634.10_ENSMUSG00000036197.17	novel	6611	8	NA	NA	14	2	multi-exon	FALSE	canonical	0	0	junction_6	35.5275116161075	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTAAATTTTTTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	93234802	93137620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93234220_93234347_93234637
ES.12621.6	chr15	-	7086	9	NNC	ENSMUSG00000036197.17	novel	1891	8	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.9220660259137	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTAAATTTTTTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	93173043	93137620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93163751_93163845_93167973_93168443_93172756
ES.12621.7	chr15	-	6480	8	NNC	ENSMUSG00000036197.17	novel	6611	8	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.3820649451564	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTAAATTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	93173051	93137622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93142149_93142198_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
ES.12621.8	chr15	-	6350	6	NIC	ENSMUSG00000036197.17	novel	6611	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	23.6862829502647	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTAAATTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	93173043	93137622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93172756
ES.12621.9	chr15	-	6646	8	NNC	ENSMUSG00000036197.17	novel	6611	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.0696987600244	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTAAATTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	93173032	93137622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93154016_93154152_93156945_93157072_93159627_93159800_93172756
ES.12622.1	chr15	+	3972	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	-6	403	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296224	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.10	chr15	+	1208	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	-38	2181	12	9	multi-exon	FALSE	canonical	3	14	junction_4	61.4527257328754	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAATTAGAATGTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	93296242	93387198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.11	chr15	+	1149	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	13	-8	13	8	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTAATTAGAATGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93296243	93387197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.12	chr15	+	1035	7	NIC	ENSMUSG00000036167.17	novel	1154	8	NA	NA	14	15	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAATGTTTCCCCTAT	NA	False	NA	NA	False	AATAAA	-26	NA	93296244	93387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.13	chr15	+	4093	9	NNC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	14	397	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	68.829499489681	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296244	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.14	chr15	+	3222	7	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCACTTGGTAGAAACAT	NA	False	NA	NA	False	TATAAA	-33	NA	93296244	93389391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.15	chr15	+	3625	7	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	14	403	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296244	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.16	chr15	+	3145	2	ISM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	14	75570	14	-6759	5prime_fragment	FALSE	canonical	3	151	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGCCAAAATAACCTTC	NA	False	NA	NA	False	NA	NA	NA	93296244	93311619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_93296343_93308572
ES.12622.17	chr15	+	1361	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	15	15	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAATGTTTCCCCTAT	NA	False	NA	NA	False	AATAAA	-26	NA	93296245	93387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.18	chr15	+	3541	6	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	18	403	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296248	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
ES.12622.2	chr15	+	3764	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	-5	-2605	-5	403	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296225	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.20	chr15	+	3135	6	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCACTTGGTAGAAACAT	NA	False	NA	NA	False	TATAAA	-33	NA	93296251	93389391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
ES.12622.21	chr15	+	3446	5	NIC	ENSMUSG00000036167.17	novel	1198	8	NA	NA	21	403	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	88.8801862059256	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296251	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93321894_93321957_93339381_93339594_93362985_93363127_93386854
ES.12622.22	chr15	+	3787	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	-21	-415	-18	403	multi-exon	FALSE	canonical	3	14	junction_4	61.4527257328754	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296259	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.23	chr15	+	1222	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	-17	11	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATTAGAATGTTTCCC	NA	False	NA	NA	False	AATAAA	-22	NA	93296260	93387200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.24	chr15	+	3511	6	NIC	ENSMUSG00000036167.17	novel	1198	8	NA	NA	-17	397	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	71.6027932416048	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296260	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.25	chr15	+	932	6	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	-10	15	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAATGTTTCCCCTAT	NA	False	NA	NA	False	AATAAA	-26	NA	93296267	93387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
ES.12622.26	chr15	+	3868	8	NNC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	-9	403	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	72.1811779412029	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296268	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.27	chr15	+	3620	7	NIC	ENSMUSG00000036167.17	novel	1198	8	NA	NA	-6	397	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	62.0152311040513	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296271	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.28	chr15	+	4397	10	NNC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	1	397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.5056307069933	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296281	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93296886_93297375_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.29	chr15	+	3621	6	NNC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	4	393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.2821079939457	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATAAATTCGTCTCCT	NA	False	NA	NA	False	AATAAA	-13	NA	93296284	93389784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93321894_93321957_93339381_93339594_93386854
ES.12622.3	chr15	+	3905	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	-2	403	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	65.5777210643981	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296228	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93362985_93363127_93386854
ES.12622.30	chr15	+	1359	10	FSM	ENSMUSG00000036167.17	ENSMUST00000049122.16	3573	10	15	2199	12	3	multi-exon	FALSE	canonical	3	14	junction_5	61.5210492934966	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGTATCTTAATTAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	93296292	93387192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.31	chr15	+	3378	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCACTTGGTAGAAACAT	NA	False	NA	NA	False	TATAAA	-33	NA	93296295	93389391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.32	chr15	+	4014	9	NIC	ENSMUSG00000036167.17	novel	3473	8	NA	NA	12	397	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	67.9281559811541	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296356	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296586_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93362985_93363127_93386854
ES.12622.33	chr15	+	3788	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	11481	397	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	66.1081365210495	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93308569	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93362985_93363127_93386854
ES.12622.35	chr15	+	175	1	Intergenic	novelGene_10533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTGTAGTA	4441	False	NA	NA	False	NA	NA	NA	93345692	93345867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93345700_93345900
ES.12622.36	chr15	+	3166	3	NIC	ENSMUSG00000036167.17	novel	3473	8	NA	NA	22501	403	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	60.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93353326	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93353412_93362985_93363127_93386854
ES.12622.37	chr15	+	176	1	Intergenic	novelGene_10537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	93378551	93378727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93378600_93378700
ES.12622.4	chr15	+	4123	8	NNC	ENSMUSG00000036167.17	novel	1154	8	NA	NA	0	399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7792300490367	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTCGTCTCCTCTCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	93296230	93389790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93296886_93297375_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.5	chr15	+	3846	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	0	403	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
ES.12622.6	chr15	+	3683	8	NIC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	7	397	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	67.6244129326813	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296237	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93362985_93363127_93386854
ES.12622.7	chr15	+	4226	10	NNC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	7	403	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.021553881277	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296237	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.8	chr15	+	4005	10	FSM	ENSMUSG00000036167.17	ENSMUST00000049122.16	3573	10	-35	-397	12	397	multi-exon	FALSE	canonical	3	14	junction_5	61.5210492934966	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTCGTCTCCTCTCG	NA	False	NA	NA	False	AATAAA	-17	NA	93296242	93389788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12622.9	chr15	+	4014	9	NNC	ENSMUSG00000036167.17	novel	3351	9	NA	NA	12	403	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	66.2400935989677	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296242	93389794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_93296343_93297107_93297375_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ES.12623.1	chr15	+	2540	2	Intergenic	novelGene_10539	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTTGGTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	93391235	93395452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93392379_93394055
ES.12624.1	chr15	+	177	1	Intergenic	novelGene_10540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	93423944	93424121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_93423900_93424100
ES.12625.1	chr15	-	936	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGGAATAGTGACTGG	NA	False	NA	-8	True	AATAAA	-20	NA	93296217	93283987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
ES.12625.10	chr15	-	8350	5	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	583	junction_1	45.3065944427519	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296188	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93284168_93285457_93285534_93285627_93293497_93295050_93295137_93296043
ES.12625.11	chr15	-	5100	7	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_6	347.640339367507	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296187	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285113_93285278_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289913_93292300
ES.12625.12	chr15	-	829	8	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	235.017845609864	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296183	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289343_93289447_93293467_93293497_93295050_93295137_93296043
ES.12625.13	chr15	-	5393	6	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	340.569288104491	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGCAGTTGTGGAATA	NA	False	NA	-16	True	AATAAA	-12	NA	93296187	93283995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285113_93285278_93285457_93285534_93285627_93285741_93288931_93289913_93292300
ES.12625.14	chr15	-	7006	3	FSM	ENSMUSG00000022635.10	ENSMUST00000159719.2	1744	3	-17	-5245	11	-1023	multi-exon	FALSE	canonical	3	636	junction_1	28	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTACATTTATATATC	NA	False	NA	NA	False	NA	NA	NA	93296171	93286704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93293497_93295050_93295137_93296043
ES.12625.2	chr15	-	5160	6	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	583	junction_1	48.8614367369606	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	93296186	93283990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93293497_93295050_93295137_93296043
ES.12625.3	chr15	-	5234	5	NNC	ENSMUSG00000022635.10	novel	693	4	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	292.277693298685	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	93296187	93283990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289913_93292300
ES.12625.4	chr15	-	5503	8	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	301.505135841457	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	93296168	93283990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285457_93285534_93285627_93287161_93287307_93289040_93289334_93289913_93292300_93293497_93295050_93295137_93296043
ES.12625.5	chr15	-	885	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	-15	7	-15	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296230	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ES.12625.6	chr15	-	3916	8	NNC	ENSMUSG00000022635.10	novel	877	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.853346683562	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93296217	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285457_93285534_93285627_93287161_93287307_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ES.12625.9	chr15	-	6426	4	NNC	ENSMUSG00000022635.10	novel	693	4	NA	NA	1910	0	intron_retention	FALSE	non_canonical	0	0	junction_2	274.828835621171	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTTGTGGAATAGT	NA	False	NA	-14	True	AATAAA	-14	NA	93294244	93283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93284168_93285457_93287161_93287307_93289913_93292300
ES.12626.1	chr15	-	2303	1	Intergenic	novelGene_10531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACAGCCCACTGTGACT	NA	False	NA	NA	False	NA	NA	NA	93307600	93305297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93305300_93307600
ES.12627.1	chr15	-	199	1	Intergenic	novelGene_10532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTTTGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	93310310	93310111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93310100_93310300
ES.12628.1	chr15	-	159	2	Intergenic	novelGene_10535	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	93504818	93358779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93358836_93504715
ES.12628.10	chr15	-	3316	8	NIC	ENSMUSG00000036158.13	novel	4085	8	NA	NA	5	-761	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.38505138783324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGAGATTTTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	93493767	93397755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410515_93493574
ES.12628.2	chr15	-	156	1	Intergenic	novelGene_10534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	93358935	93358779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93358800_93358900
ES.12628.3	chr15	-	3735	1	Intergenic	novelGene_10536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGATCTACGAGTAC	6902	False	NA	NA	False	NA	NA	NA	93380949	93377214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93377200_93380900
ES.12628.4	chr15	-	171	1	Intergenic	novelGene_10538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGCGAT	1929	False	NA	NA	False	NA	NA	NA	93385922	93385751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93385800_93385900
ES.12628.5	chr15	-	3954	8	FSM	ENSMUSG00000036158.13	ENSMUST00000048982.11	4085	8	134	-3	134	3	multi-exon	FALSE	canonical	0	0	junction_7	1.38505138783324	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAGTCCGCATCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	93493638	93396991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410518_93493574
ES.12628.8	chr15	-	4155	8	NIC	ENSMUSG00000036158.13	novel	4144	8	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.38505138783324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGAGTCCGCATCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	93417410	93396992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410518_93417144
ES.12628.9	chr15	-	4281	8	NNC	ENSMUSG00000036158.13	novel	4085	8	NA	NA	17693	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.38505138783324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCCGAGTCCGCATCT	NA	False	NA	NA	False	AATAAA	-14	NA	93476079	93396994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410518_93475685
ES.12629.1	chr15	-	341	1	Intergenic	novelGene_10541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	-32	True	AAAAAG	-30	NA	93576856	93576515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_93576500_93576900
ES.1263.1	chr1	+	180	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATCCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130377443	130377623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_130377400_130377600
ES.12630.1	chr15	-	3735	8	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	73674	2	73674	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTTCGTAAGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	94228465	94218216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_94220837_94222540_94222703_94223793_94224085_94224186_94224352_94225619_94225728_94226682_94226803_94227796_94227962_94228361
ES.12631.1	chr15	-	2804	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	39	-3	-15	3	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTCTATGTTTTATG	NA	False	NA	0	True	AATAAA	-30	NA	94441389	94420565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
ES.12631.3	chr15	-	3070	9	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.2725243493013	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATCGAATTGTCTCTATG	NA	False	NA	-7	True	AATAAA	-23	NA	94441372	94420572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437643_94438856_94441340
ES.12631.4	chr15	-	2698	10	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.5432517972944	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATCGAATTGTCTCTAT	NA	False	NA	-8	True	AATAAA	-22	NA	94441373	94420573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431422_94431503_94431558_94434394_94434555_94437933_94438856_94441340
ES.12631.5	chr15	-	2372	9	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.2479506819769	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTATCGAATTGTCTC	NA	False	NA	-11	True	AATAAA	-19	NA	94441371	94420576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438453_94441340
ES.12631.6	chr15	-	2926	9	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	14.4389880185559	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTATCGAATTGTCTC	NA	False	NA	-11	True	AATAAA	-19	NA	94441363	94420576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427578_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
ES.12631.7	chr15	-	1899	8	NNC	ENSMUSG00000033356.4	novel	2840	9	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.8113552266968	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTATCGAATTGTCTC	NA	False	NA	-11	True	AATAAA	-19	NA	94441421	94420576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94421529_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94441340
ES.12631.9	chr15	-	1133	2	ISM	ENSMUSG00000033356.4	ENSMUST00000147832.2	1471	3	10	3707	3	869	5prime_fragment	FALSE	canonical	3	33	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGTGTGGAAAGCTGACG	NA	False	NA	NA	False	CATAAA	-23	NA	94441364	94437746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_94438856_94441340
ES.12632.1	chr15	+	2729	11	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	-30	-3854	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	11.4127122105133	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	94441493	94462333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94461013
ES.12632.10	chr15	+	2009	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10105	411	10076	-411	3prime_fragment	FALSE	canonical	1	2	junction_8	12.598983093885	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAAGCTGTCTGAGGGG	NA	False	NA	NA	False	AATAAA	-12	NA	94451628	94465776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ES.12632.11	chr15	+	3717	6	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10117	3853	10088	-3853	intron_retention	FALSE	canonical	3	22	junction_1	4.38178046004133	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATATA	NA	False	NA	NA	False	NA	NA	NA	94451640	94462334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326
ES.12632.12	chr15	+	1153	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10164	1208	10135	-1208	3prime_fragment	FALSE	canonical	1	2	junction_8	12.598983093885	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCACTTTGACACTGA	NA	False	NA	NA	False	AATAAA	-43	NA	94451687	94464979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ES.12632.2	chr15	+	1530	10	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	-13	5179	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	10.2101377845868	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	94441510	94460013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459812
ES.12632.3	chr15	+	2297	8	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	-4	-5514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5210027635202	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94441548	94460673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94441712_94445716_94445885_94449683_94449830_94451715_94451899_94454507_94454573_94456130_94456246_94456649_94456760_94459326
ES.12632.4	chr15	+	1503	10	NNC	ENSMUSG00000059883.17	novel	3437	12	NA	NA	0	5179	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	9.63788819653397	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	94441552	94460013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
ES.12632.5	chr15	+	2469	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	33	5491	4	-5491	5prime_fragment	FALSE	canonical	2	7	junction_3	9.35330823826522	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGCACAGAGATCCC	NA	False	NA	NA	False	NA	NA	NA	94441556	94460696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326
ES.12632.6	chr15	+	1144	7	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	10053	5179	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	8.1325819325039	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	94451605	94460013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459797
ES.12632.7	chr15	+	2095	9	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	10055	-274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.941575445053	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTGCTCCATCTGCA	NA	False	NA	NA	False	AGTAAA	-17	NA	94451607	94465913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464966
ES.12632.8	chr15	+	1810	9	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	10100	615	10071	-615	3prime_fragment	FALSE	canonical	1	2	junction_8	12.598983093885	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACATGAGTGGAATCTAT	NA	False	NA	5	True	NA	NA	NA	94451623	94465572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ES.12632.9	chr15	+	1111	7	NNC	ENSMUSG00000059883.17	novel	2831	12	NA	NA	10071	5179	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	9.45897574910847	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTTGTCTTGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	94451623	94460013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94459812
ES.12633.1	chr15	-	3002	1	Antisense	novelGene_ENSMUSG00000059883.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCAAAGTAAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	94446084	94443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_94443100_94446100
ES.12634.1	chr15	-	1064	1	Antisense	novelGene_ENSMUSG00000059883.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	94466020	94464956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_94465000_94466000
ES.12635.1	chr15	+	1013	1	Intergenic	novelGene_10542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCCCGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	94466727	94467740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_94466700_94467700
ES.12636.1	chr15	-	3090	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	-54	-11	-44	11	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTTTCTGGTACATT	NA	False	NA	-1	True	AATAAA	-23	NA	94487814	94475820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.10	chr15	-	3229	10	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	219.896833274039	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487775	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94481925_94482113_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.12	chr15	-	2975	9	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	47	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	173.283726875896	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487713	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483416_94484234_94484418_94486108_94486187_94487632
ES.12636.13	chr15	-	4489	8	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	-16	-2	-6	2	intron_retention	FALSE	canonical	3	505	junction_2	19.025224930956	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487776	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108
ES.12636.14	chr15	-	1915	2	NNC	ENSMUSG00000022451.13	novel	814	6	NA	NA	1430	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94477837	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94476640_94476732
ES.12636.16	chr15	-	6603	6	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	66	2	intron_retention	FALSE	canonical	3	505	junction_2	14.7377067415524	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487694	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94480757_94482261_94482367_94483328_94484418_94486108
ES.12636.18	chr15	-	4402	9	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	175.457972175675	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487687	94475831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94481854_94481908_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.19	chr15	-	5159	7	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	62	0	intron_retention	FALSE	canonical	3	499	junction_6	15.9521854998687	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487698	94475831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94480757_94482261_94482367_94483328_94484418_94486108_94486187_94487632
ES.12636.2	chr15	-	2961	9	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	60	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	176.370171797841	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGCTTTCTGGTACA	NA	False	NA	-3	True	AATAAA	-21	NA	94487700	94475822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486174_94487632
ES.12636.20	chr15	-	3834	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	499	junction_7	17.1357127969987	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487755	94475831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94484418_94486108_94486187_94487632
ES.12636.21	chr15	-	5405	6	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	47	-59	intron_retention	FALSE	canonical	3	499	junction_5	23.0772615359795	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTCTTCTGTGGACA	NA	False	NA	-71	True	AATAAA	-20	NA	94487713	94475890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.23	chr15	-	3022	10	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	68	-64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	218.547957841164	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTACATGTCTTCTGT	NA	False	NA	-76	True	AATAAA	-15	NA	94487692	94475895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480335_94480465_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.24	chr15	-	2828	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	32	165	32	-165	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTATGCATTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	94487728	94475996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.25	chr15	-	4291	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	-43	-169	intron_retention	FALSE	canonical	3	499	junction_7	21.0422315880251	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATCACGTATGCATTT	NA	False	NA	NA	False	ATTAAA	-12	NA	94487813	94476000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.26	chr15	-	1326	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	40	1659	40	56	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTTTGGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	94487720	94477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.28	chr15	-	3510	7	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	62	2	intron_retention	FALSE	canonical	3	505	junction_2	15.5643824162734	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGACTCATGATTTTT	NA	False	NA	85	True	TTTAAA	-9	NA	94487698	94477544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94484418_94486108
ES.12636.29	chr15	-	1149	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	41	-42	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCACTTTTCACTT	NA	False	NA	41	True	NA	NA	NA	94487719	94477588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
ES.12636.31	chr15	-	1178	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	18	1829	18	-114	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCTTTTAGTACAAGGA	NA	False	NA	-31	True	ATTAAA	-26	NA	94487742	94477660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.32	chr15	-	503	4	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	62	7413	62	-921	5prime_fragment	FALSE	canonical	3	499	junction_3	27.3536509852382	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGCGTGGTGAGCCA	NA	False	NA	NA	False	AATAAA	-13	NA	94487698	94483244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.4	chr15	-	2974	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGGCTTTCTGGTAC	NA	False	NA	-4	True	AATAAA	-20	NA	94487779	94475823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
ES.12636.5	chr15	-	4404	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	6	3	intron_retention	FALSE	canonical	3	499	junction_7	21.0422315880251	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487754	94475828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ES.12636.6	chr15	-	5930	6	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	1617	3	intron_retention	FALSE	canonical	3	505	junction_2	19.231224609993	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94486143	94475828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94480757_94482261_94482367_94483328_94483425_94484238
ES.12636.7	chr15	-	5289	7	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	-1	3	intron_retention	FALSE	canonical	3	505	junction_2	15.5643824162734	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTGGCTTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	94487761	94475828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94484418_94486108
ES.12636.8	chr15	-	5333	6	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	41	2	intron_retention	FALSE	canonical	3	499	junction_5	16.2406896405294	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487719	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94480757_94482261_94482367_94483328_94484418_94486108_94486187_94487632
ES.12636.9	chr15	-	5284	7	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	62	2	intron_retention	FALSE	canonical	3	499	junction_6	18.4518893943743	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTATGTTGGCTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	94487698	94475829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94482367_94483328_94484418_94486108_94486187_94487632
ES.12637.1	chr15	+	2997	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	-276	-4	-258	4	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGATGTAGGTTTTGT	NA	False	NA	8	True	AATAAA	-21	NA	94526854	94993983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
ES.12637.2	chr15	+	2822	8	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-116	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.2578424353693	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTGTGATGTAGGTTT	NA	False	NA	5	True	AATAAA	-18	NA	94526996	94993980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94527184_94535941_94536245_94687435_94687539_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
ES.12637.3	chr15	+	2321	6	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-113	-93668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.407613477601	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAAGTTGTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	94526999	94900311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94898808
ES.12637.4	chr15	+	652	4	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-88	-1744	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	49.179941710688	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGGTAGCCTTTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	94527024	94613286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94613229
ES.12637.5	chr15	+	1204	6	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-69	-171240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.156411826464	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCAGTTCCCTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	94527043	94822739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94803921_94804034_94822323
ES.12637.6	chr15	+	357	2	ISM	ENSMUSG00000063296.6	ENSMUST00000229677.2	2662	3	-66	78869	-66	-78869	5prime_fragment	FALSE	canonical	3	120	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAAGGTGCTTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	94527046	94536161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_94527184_94535941
ES.12637.7	chr15	+	6258	6	NNC	ENSMUSG00000063296.6	novel	2717	8	NA	NA	-5	6094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	49.7352993355826	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAGTTATACCACTA	NA	False	NA	NA	False	ATTAAA	-13	NA	94527125	94621124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_94527184_94535941_94536245_94612742_94612876_94614919_94617206_94617337_94617643_94617951
ES.12638.1	chr15	-	1289	1	Intergenic	novelGene_10543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGATGCCTAACAATAC	NA	False	NA	NA	False	NA	NA	NA	94650323	94649034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_94649000_94650300
ES.12639.1	chr15	-	1177	1	Intergenic	novelGene_10544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTACATTCCTAAAGC	NA	False	NA	NA	False	NA	NA	NA	94752948	94751771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_94751800_94752900
ES.1264.1	chr1	-	4120	3	FSM	ENSMUSG00000086825.2	ENSMUST00000130486.2	3681	3	-423	-16	-423	16	multi-exon	FALSE	canonical	3	4	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATTTGTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	130365351	130357501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130359963_130363408_130363558_130363841
ES.1264.10	chr1	-	2666	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-59	-24	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	25.6855990780826	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAGAAATAAATA	NA	False	NA	NA	False	TTTAAA	-21	NA	130390247	130366787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
ES.1264.11	chr1	-	2687	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	1	-24	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAGAAATAAATA	NA	False	NA	NA	False	TTTAAA	-21	NA	130390187	130366787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
ES.1264.13	chr1	-	2452	9	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	30	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1094479230428	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTGTAATAAAAATAGAA	NA	False	NA	NA	False	TTTAAA	-14	NA	130390438	130366794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130368117_130376050_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.14	chr1	-	1551	10	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-14	-48	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	18.9912260443255	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTCATTGTCTTCAAG	NA	False	NA	NA	False	AATAAA	-24	NA	130390202	130367938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
ES.1264.15	chr1	-	1364	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	-9	1178	-9	-51	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTGTCATTGTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	130390490	130367941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.16	chr1	-	3344	8	NIC	ENSMUSG00000026399.13	novel	3133	8	NA	NA	-24	-5	intron_retention	FALSE	canonical	3	19	junction_7	19.4401226165613	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATCTCCTGATTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	130390212	130374402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130375377_130376064_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
ES.1264.17	chr1	-	2005	8	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	32	-7	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	22.8830210649998	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACATCTCCTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	130390436	130374404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.2	chr1	-	6808	12	Fusion	ENSMUSG00000086825.2_ENSMUSG00000026399.13	novel	2533	10	NA	NA	65	-17	multi-exon	FALSE	canonical	0	0	junction_3	32.7143914043755	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCATTCAGATACAGCACA	NA	False	NA	NA	False	NA	NA	NA	130390123	130357534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_130359963_130363408_130363558_130363841_130363991_130365247_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130389834
ES.1264.3	chr1	-	6668	13	Fusion	ENSMUSG00000086825.2_ENSMUSG00000026399.13	novel	2533	10	NA	NA	114	-17	multi-exon	FALSE	canonical	0	0	junction_3	28.6689679308869	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCATTCAGATACAGCACA	NA	False	NA	NA	False	NA	NA	NA	130390354	130357534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_130359963_130363408_130363558_130363841_130364011_130365247_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.4	chr1	-	5966	11	Fusion	ENSMUSG00000086825.2_ENSMUSG00000026399.13	novel	2533	10	NA	NA	515	-1829	multi-exon	FALSE	canonical	1	3	junction_5	30.7434545879281	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATCTCCCTGTCTTAATC	NA	False	NA	NA	False	NA	NA	NA	130389673	130359346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_130359963_130363408_130363558_130363841_130368117_130375355_130375377_130376064_130376138_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558
ES.1264.5	chr1	-	3439	1	NIC	ENSMUSG00000086825.2	novel	3681	3	NA	NA	2135	-1837	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAGAGATCTCCCTG	NA	False	NA	NA	False	NA	NA	NA	130362793	130359354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130359400_130362800
ES.1264.6	chr1	-	2466	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	-38	-24	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	21.5982493503525	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAGAAATAAATA	NA	False	NA	NA	False	TTTAAA	-21	NA	130390519	130366787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.7	chr1	-	2474	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	35	24	22	-24	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAGAAATAAATA	NA	False	NA	NA	False	TTTAAA	-21	NA	130390446	130366787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.1264.9	chr1	-	2411	10	NNC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	77	-24	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	22.1883074535739	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAGAAATAAATA	NA	False	NA	NA	False	TTTAAA	-21	NA	130390391	130366787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130368117_130375355_130375377_130376064_130376138_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ES.12640.1	chr15	-	2533	1	Intergenic	novelGene_10545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	94835635	94833102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_94833100_94835600
ES.12641.1	chr15	+	176	1	Intergenic	novelGene_10546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATTTAAAC	NA	False	NA	NA	False	NA	NA	NA	95018020	95018196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_95018000_95018200
ES.12642.1	chr15	+	174	1	Intergenic	novelGene_10547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAACGCATTTTAATC	NA	False	NA	NA	False	NA	NA	NA	95361685	95361859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_95361700_95361900
ES.12643.1	chr15	-	3449	21	NNC	ENSMUSG00000022454.18	novel	3220	21	NA	NA	-58559	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	3.2542280190546	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGCGAGCCCGCGTCT	NA	False	NA	0	True	AATAAA	-22	NA	95484999	95117330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95484686
ES.12643.2	chr15	-	3151	21	FSM	ENSMUSG00000022454.18	ENSMUST00000075275.3	2675	21	4	-480	4	-3	multi-exon	FALSE	canonical	0	0	junction_20	3.2542280190546	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGCCATGCGAGCCCGCG	NA	False	NA	-3	True	AATAAA	-19	NA	95426129	95117333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95426111
ES.12644.1	chr15	-	926	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	-40	379	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTTATATGGAACAAAT	NA	False	NA	0	True	ATTAAA	-27	NA	95530749	95522239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_95522899_95530158_95530347_95530670
ES.12644.2	chr15	-	898	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	-38	368	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	12.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTCTCCAAGTTTTAT	NA	False	NA	-11	True	ATTAAA	-16	NA	95530747	95522250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_95522899_95530158_95530347_95530685
ES.12645.1	chr15	-	177	1	Intergenic	novelGene_10548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	95665304	95665127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_95665100_95665300
ES.12646.1	chr15	-	3885	1	Antisense	novelGene_ENSMUSG00000043329.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGACAATCTAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	95675178	95671293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_95671300_95675200
ES.12647.1	chr15	-	1579	3	NNC	ENSMUSG00000097643.2	novel	2618	2	NA	NA	940	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTGTATATGTCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	95688583	95685736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_95686186_95687127_95687312_95687637
ES.12648.1	chr15	+	5784	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-136	-721	-136	721	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688587	95873353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.10	chr15	+	5283	21	NNC	ENSMUSG00000064210.8	novel	4134	21	NA	NA	-2	715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	24.0678208402838	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCTGTGGCCTAAC	NA	False	NA	3	True	AATAAA	-12	NA	95688721	95873347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375_95870449_95870809
ES.12648.11	chr15	+	5431	19	NNC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	-2	721	intron_retention	FALSE	canonical	0	0	junction_15	25.1843205189261	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688721	95873353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95860044_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.12	chr15	+	5641	21	NNC	ENSMUSG00000064210.8	novel	4134	21	NA	NA	-17	715	intron_retention	FALSE	canonical	0	0	junction_12	31.1873371739236	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCTGTGGCCTAAC	NA	False	NA	3	True	AATAAA	-12	NA	95688751	95873347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95845940_95845968_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.13	chr15	+	5511	19	NIC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	2	718	intron_retention	FALSE	canonical	0	0	junction_1	25.0552475960379	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTGTGGCCTAACGAG	NA	False	NA	6	True	AATAAA	-15	NA	95688774	95873350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_95688938_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.16	chr15	+	3858	1	Intergenic	novelGene_10551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTTTTGGGAAGTCC	8187	False	NA	NA	False	NA	NA	NA	95713284	95717142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_95713300_95717100
ES.12648.17	chr15	+	199	1	Intergenic	novelGene_10552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGAACCAAGGCAGGTC	NA	False	NA	NA	False	NA	NA	NA	95720340	95720539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_95720300_95720500
ES.12648.18	chr15	+	5237	22	NNC	ENSMUSG00000064210.8	novel	3490	2	NA	NA	29401	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2887023990229	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTCTGAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	95728003	95872658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95728381_95728524_95728588_95731377_95731436_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.19	chr15	+	5662	20	NNC	ENSMUSG00000064210.8	novel	3490	2	NA	NA	50987	715	intron_retention	TRUE	canonical	0	0	junction_1	24.396880051201	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCTGTGGCCTAAC	NA	False	NA	3	True	AATAAA	-12	NA	95749589	95873347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95749824_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.2	chr15	+	5020	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	-67	-26	-67	26	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTCTGAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	95688656	95872658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.20	chr15	+	4171	8	ISM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	157370	-715	9619	715	3prime_fragment	FALSE	canonical	3	79	junction_5	8.4972984902646	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCTGTGGCCTAAC	9149	False	NA	3	True	AATAAA	-12	NA	95846093	95873347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.21	chr15	+	5939	4	NNC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	22410	719	intron_retention	FALSE	non_canonical	0	0	junction_2	41.8276888622304	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGTGGCCTAACGAGG	6705	False	NA	7	True	AATAAA	-16	NA	95858884	95873351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95860163_95863701_95864721_95864943_95865610_95870375
ES.12648.22	chr15	+	5722	3	NNC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	26168	721	intron_retention	FALSE	non_canonical	0	0	junction_1	48	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95862642	95873353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95864709_95864931_95865610_95870375
ES.12648.3	chr15	+	5049	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-82	-1818	-33	26	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTCTGAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	95688690	95872658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.4	chr15	+	5730	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-68	-2513	-19	721	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688704	95873353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.5	chr15	+	7032	20	NNC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	-14	715	intron_retention	TRUE	non_canonical	0	0	junction_18	24.5618671635435	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCTGTGGCCTAAC	NA	False	NA	3	True	AATAAA	-12	NA	95688709	95873347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95864721_95864943_95865610_95870375
ES.12648.6	chr15	+	8260	10	ISM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-53	38385	-4	-9554	intron_retention	FALSE	canonical	3	29	junction_1	31.2018517968975	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAACTATA	NA	False	NA	NA	False	NA	NA	NA	95688719	95832455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404
ES.12648.7	chr15	+	4212	15	NIC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.3401028928925	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95688720	95872630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_95688938_95762105_95762189_95792293_95792423_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ES.12648.9	chr15	+	5560	20	NNC	ENSMUSG00000064210.8	novel	4927	20	NA	NA	-2	721	intron_retention	TRUE	canonical	0	0	junction_16	24.6627108704462	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTAACGAGGTT	NA	False	NA	9	True	AATAAA	-18	NA	95688721	95873353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95860046_95860163_95863701_95863905_95865503_95865610_95870375
ES.12649.1	chr15	-	3526	1	Intergenic	novelGene_10549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	95698424	95694898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_95694900_95698400
ES.1265.1	chr1	-	1437	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCGTGCTCTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	130529086	130527649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_130527600_130529100
ES.12650.1	chr15	-	177	1	Intergenic	novelGene_10550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	95705566	95705389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_95705400_95705600
ES.12651.1	chr15	-	173	1	Intergenic	novelGene_10553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCAGAGCGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	96034336	96034163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96034200_96034300
ES.12652.1	chr15	+	179	1	Intergenic	novelGene_10554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCTAAAATATCT	7769	False	NA	NA	False	NA	NA	NA	96070984	96071163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96071000_96071200
ES.12653.1	chr15	+	177	1	Intergenic	novelGene_10555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAACATGTCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	96079745	96079922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96079700_96079900
ES.12654.1	chr15	+	2189	3	Antisense	novelGene_ENSMUSG00000097536.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTTGCATATGAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	96080410	96101351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96080932_96097658_96097833_96099857
ES.12654.2	chr15	+	1954	2	Antisense	novelGene_ENSMUSG00000097536.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTTTTGCATATGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	96080420	96101349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96080932_96099906
ES.12654.3	chr15	+	1813	2	Antisense	novelGene_ENSMUSG00000097536.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTTTCTGTCTCTA	NA	False	NA	NA	False	AATGAA	-18	NA	96080435	96101223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96080932_96099906
ES.12655.1	chr15	-	3434	4	NNC	ENSMUSG00000097536.3	novel	2449	7	NA	NA	85591	-44547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCCAGAGGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	96095898	96077246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96079697_96091078_96091829_96093804_96093963_96095822
ES.12655.2	chr15	-	501	3	NNC	ENSMUSG00000097536.3	novel	2449	7	NA	NA	85591	-58292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCTGTTAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	96095898	96090991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96091259_96093804_96093963_96095822
ES.12656.1	chr15	+	4973	1	Intergenic	novelGene_10556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAACTATCTGGCCCATC	NA	False	NA	NA	False	NA	NA	NA	96116003	96120976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96116000_96121000
ES.12657.1	chr15	-	588	1	Intergenic	novelGene_10557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAATAATACCAAGCTA	NA	False	NA	NA	False	ATTAAA	-6	NA	96170471	96169883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96169900_96170500
ES.12658.1	chr15	-	5067	1	FSM	ENSMUSG00000097536.3	ENSMUST00000185067.2	2997	1	4	-2074	4	2074	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTTATTTGTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	96182372	96177305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96177300_96182400
ES.12659.1	chr15	+	6062	15	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-760	31805	-705	13404	5prime_fragment	FALSE	canonical	3	74	junction_13	12.5795428358579	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTTTAATATTATGGA	NA	False	NA	NA	False	AATAAA	-28	NA	96184693	96271068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800
ES.12659.10	chr15	+	6605	20	NIC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-635	-1279	intron_retention	FALSE	canonical	3	74	junction_12	17.2666877007469	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGATTGTCAACC	NA	False	NA	NA	False	NA	NA	NA	96184763	96300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.11	chr15	+	2943	15	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-681	34845	-626	10364	5prime_fragment	FALSE	canonical	3	74	junction_13	12.5795428358579	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGCAACAGTAATCCAG	NA	False	NA	NA	False	AATAAA	-23	NA	96184772	96268028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800
ES.12659.12	chr15	+	9017	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-680	170	-625	-170	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATAGTGAAGGCATAT	NA	False	NA	NA	False	AATAAA	-22	NA	96184773	96302703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.13	chr15	+	7291	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-676	1892	-621	-501	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGGATTTCCTTTTTG	NA	False	NA	NA	False	AATATA	-30	NA	96184777	96300981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.14	chr15	+	5265	22	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-611	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	37.515167000855	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTCTTGAGTCCTTT	NA	False	NA	6	True	AATAAA	-7	NA	96184787	96301475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96187143_96187202_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96268076_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.15	chr15	+	6225	20	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-386	-1285	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_19	27.6962151278829	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACTGCTGTGGGATTG	NA	False	NA	NA	False	NA	NA	NA	96185012	96300197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290405_96299833
ES.12659.16	chr15	+	6091	20	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-433	12137	-378	-10746	5prime_fragment	FALSE	canonical	3	74	junction_13	17.1540195817667	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAACAAGCCTTAAACT	NA	False	NA	NA	False	AAAACA	-34	NA	96185020	96290736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453
ES.12659.17	chr15	+	4832	20	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-378	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	26.4880676632301	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96185020	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96268076_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.18	chr15	+	7458	20	NIC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-208	1	intron_retention	FALSE	canonical	3	74	junction_12	17.2666877007469	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCCTTTATTTCTGA	NA	False	NA	14	True	AATAAA	-15	NA	96185190	96301483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.19	chr15	+	4808	21	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-204	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	26.1397685529157	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCCTTTATTTCTGA	NA	False	NA	14	True	AATAAA	-15	NA	96185194	96301483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96268076_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.2	chr15	+	6564	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-727	2670	-672	-1279	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGATTGTCAACC	NA	False	NA	NA	False	NA	NA	NA	96184726	96300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.20	chr15	+	6992	21	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.7817836000499	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96185409	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185500_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.21	chr15	+	7271	22	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	33.7266590154535	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96185416	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299027_96299146_96299833
ES.12659.22	chr15	+	5837	21	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	22	-1279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	27.8091711491012	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGATTGTCAACC	NA	False	NA	NA	False	NA	NA	NA	96185420	96300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260405_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.23	chr15	+	5787	21	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-7	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	27.6514014111401	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCATATAGTGAAGGC	NA	False	NA	NA	False	AATAAA	-18	NA	96185446	96302699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96302386
ES.12659.24	chr15	+	8203	21	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	137	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	26.3193844912832	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGATCATATAGTGAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	96185590	96302698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276686_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.25	chr15	+	8416	20	NIC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	197	-1	intron_retention	FALSE	canonical	3	74	junction_12	17.2666877007469	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTGGATAAGTGACTT	NA	False	NA	17	True	AATAAA	-18	NA	96185650	96302872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.26	chr15	+	6975	20	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	248	1391	248	0	3prime_fragment	FALSE	canonical	3	74	junction_12	17.2666877007469	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96185701	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.27	chr15	+	7670	19	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	620	1391	620	0	3prime_fragment	FALSE	canonical	3	74	junction_11	17.7051467721175	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	320	False	NA	13	True	AATAAA	-14	NA	96186073	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.28	chr15	+	211	1	Intergenic	novelGene_10558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAACAGCCTACTT	NA	False	NA	NA	False	NA	NA	NA	96203674	96203885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96203700_96203900
ES.12659.29	chr15	+	5704	12	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	6830	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.6625548043648	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96261550	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96296504_96296620_96299833
ES.12659.3	chr15	+	7852	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-722	1377	-667	14	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGTATGCTTAAGAC	NA	False	NA	27	True	AATAAA	-28	NA	96184731	96301496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.30	chr15	+	3739	7	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-7553	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	44.839528692141	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGAGTCCTTTATTT	NA	False	NA	10	True	AATAAA	-11	NA	96269141	96301479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96270644_96276694_96276844_96288756_96288896_96288983_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.31	chr15	+	6285	1	NIC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	7757	-10746	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAACAAGCCTTAAACT	NA	False	NA	NA	False	AAAACA	-34	NA	96284451	96290736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_96284500_96290700
ES.12659.32	chr15	+	2482	4	ISM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	101424	12166	10183	-10775	internal_fragment	FALSE	canonical	3	114	junction_2	7.07106781186548	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-12	True	NA	NA	False	AAAACA	-5	NA	96286877	96290707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_96288896_96288984_96289071_96290235_96290360_96290453
ES.12659.33	chr15	+	2730	1	NIC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	22063	5	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTATTTCTGAGTAT	9847	False	NA	18	True	AATAAA	-19	NA	96298757	96301487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_96298800_96301500
ES.12659.4	chr15	+	7884	22	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-659	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.0162692834432	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTTATTTCTG	NA	False	NA	13	True	AATAAA	-14	NA	96184739	96301482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96210036_96210091_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.5	chr15	+	1854	5	NNC	ENSMUSG00000033237.20	novel	809	5	NA	NA	-651	1236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	44.4803327325684	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGTGGCTAAGAATGAT	NA	False	NA	NA	False	NA	NA	NA	96184747	96251155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96250547
ES.12659.6	chr15	+	7390	23	NNC	ENSMUSG00000033237.20	novel	8507	21	NA	NA	-648	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.9467057771665	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTGGGATTGTCAAC	NA	False	NA	NA	False	NA	NA	NA	96184750	96300202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96249378_96249561_96250396_96251066_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.7	chr15	+	9215	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-700	-8	-645	8	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGACTTCTGTCCTGA	NA	False	NA	26	True	AATAAA	-27	NA	96184753	96302881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.12659.9	chr15	+	7531	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	-690	1666	-635	-275	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTCCATTCTTAATA	NA	False	NA	NA	False	AATATA	-19	NA	96184763	96301207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ES.1266.1	chr1	+	172	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCTAAAAAAGGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	130574831	130575003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_130574800_130575000
ES.12660.1	chr15	-	179	1	Intergenic	novelGene_10559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATAACAT	NA	False	NA	NA	False	NA	NA	NA	96219212	96219033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96219000_96219200
ES.12661.1	chr15	-	2793	1	Intergenic	novelGene_10560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGGACCAGATGGGTT	NA	False	NA	NA	False	NA	NA	NA	96237422	96234629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96234600_96237400
ES.12662.1	chr15	+	2157	8	Antisense	novelGene_ENSMUSG00000033228.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTTCAAACACGGCCT	NA	False	NA	NA	False	AATGAA	-35	NA	96317129	96332821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96318724_96319822_96319934_96321397_96321500_96322450_96322555_96322706_96322765_96329660_96329729_96330206_96330308_96332802
ES.12662.2	chr15	+	3287	2	Antisense	novelGene_ENSMUSG00000033228.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTCATTAGAATTC	NA	False	NA	NA	False	ACTAAA	-13	NA	96317130	96321516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96318724_96319822
ES.12663.1	chr15	+	176	1	Intergenic	novelGene_10561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGGCAACTGA	9793	False	NA	NA	False	NA	NA	NA	96352365	96352541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96352400_96352500
ES.12664.1	chr15	-	11729	12	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	5	1603	intron_retention	TRUE	canonical	3	241	junction_7	26.8331237265738	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTGTGCTTGACTGGT	NA	False	NA	NA	False	NA	NA	NA	96358719	96307976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.10	chr15	-	5122	4	NIC	ENSMUSG00000033228.9	novel	4519	5	NA	NA	-30	-4	intron_retention	FALSE	canonical	3	223	junction_2	11.8977121983832	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTACTGGTGACTGTAT	NA	False	NA	-6	True	NA	NA	NA	96316603	96309583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313829_96314729_96315071_96315952
ES.12664.11	chr15	-	4188	6	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	190	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	102.596296229445	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTACTGGTGACTGTAT	NA	False	NA	-6	True	NA	NA	NA	96316383	96309583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96316035_96316123
ES.12664.13	chr15	-	7530	14	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	78.6837727531831	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTACTGGTGACTGTAT	NA	False	NA	-6	True	NA	NA	NA	96358685	96309583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313042_96314717_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.14	chr15	-	6042	3	NIC	ENSMUSG00000033228.9	novel	4519	5	NA	NA	-51	-6	intron_retention	FALSE	canonical	3	244	junction_1	3.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGACTACTGGTGACTGT	NA	False	NA	-8	True	NA	NA	NA	96316624	96309585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96315071_96315952
ES.12664.15	chr15	-	7358	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-401	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGTCTTTAAAATTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	96358712	96309980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.16	chr15	-	7935	14	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	7	-406	intron_retention	FALSE	canonical	3	223	junction_2	29.9091326022296	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAGTGTCTTTAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	96358717	96309985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.17	chr15	-	3992	5	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	41760	-1087	-391	-870	3prime_fragment	FALSE	canonical	3	72	junction_2	73.1864058415222	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTTGGTTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	96316964	96310449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952
ES.12664.18	chr15	-	6566	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-125	627	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGTGGAAGACAGTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	96358849	96310909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.19	chr15	-	6347	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	38	-619	-5	619	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGCAGATGTGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	96358686	96310917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.2	chr15	-	7914	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-69	74	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTGCTTTGTTCTTT	NA	False	NA	72	True	NA	NA	NA	96358793	96309505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.20	chr15	-	6620	16	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-18	619	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	109.010009734071	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGCAGATGTGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	96358742	96310917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96336062_96336232_96341825_96341984_96344390_96344473_96358482
ES.12664.21	chr15	-	2919	5	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	41861	-115	-290	115	3prime_fragment	FALSE	canonical	3	72	junction_2	73.1864058415222	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTTTGTTGTTGCTGT	NA	False	NA	95	True	ATTAAA	-30	NA	96316863	96311421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952
ES.12664.22	chr15	-	5897	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-125	-6	-125	6	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAATTTGTTGATTGGT	NA	False	NA	-14	True	AATAAA	-1	NA	96358849	96311530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.23	chr15	-	5860	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-40	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAATTTGTTGATTGGT	NA	False	NA	-14	True	AATAAA	-1	NA	96358764	96311530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.24	chr15	-	4382	4	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-2033	6	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	107.282596704011	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAATTTGTTGATTGGT	NA	False	NA	-14	True	AATAAA	-1	NA	96318606	96311530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96314729_96315071_96315952
ES.12664.25	chr15	-	5933	16	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	109.010009734071	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTGAATAAAGTGTTAA	NA	False	NA	-27	True	NA	NA	NA	96358681	96311543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96336062_96336232_96341825_96341984_96344390_96344473_96358482
ES.12664.27	chr15	-	5416	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	3	-323	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	87.3325803571424	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGGTGACCTTCCT	NA	False	NA	NA	False	AGTAAA	-26	NA	96358702	96311859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321495_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.29	chr15	-	5525	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-43	-332	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGCTACTTGGTGGT	NA	False	NA	NA	False	AGTAAA	-17	NA	96358767	96311868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.3	chr15	-	7389	12	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	11654	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	128.836304621134	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGTGACTGTATAGTA	NA	False	NA	-2	True	NA	NA	NA	96330282	96309579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313832_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329270_96329469_96329661_96329727_96330204
ES.12664.30	chr15	-	5382	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-24	-456	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACTTTGCCATTTCAAG	NA	False	NA	NA	False	AATAAA	-23	NA	96358748	96311992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.31	chr15	-	5298	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	12	456	-7	-456	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACTTTGCCATTTCAAG	NA	False	NA	NA	False	AATAAA	-23	NA	96358712	96311992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.32	chr15	-	5368	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-175	573	-175	343	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCCGGTGCTCCTCA	NA	False	NA	NA	False	AGTAAA	-45	NA	96358899	96312109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.33	chr15	-	5180	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-38	244	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCCAAGTGCAGGTCC	NA	False	NA	NA	False	NA	NA	NA	96358762	96312208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.35	chr15	-	4992	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-142	916	-142	0	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	-3	True	AATAAA	-22	NA	96358866	96312452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.37	chr15	-	5065	16	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	109.010009734071	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGTAATGGGATGTGCG	NA	False	NA	-4	True	AATAAA	-21	NA	96358723	96312453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96336062_96336232_96341825_96341984_96344390_96344473_96358482
ES.12664.38	chr15	-	5469	14	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	5	junction_6	76.8588963024346	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTGTAATGGGATGTGC	NA	False	NA	-5	True	AATAAA	-20	NA	96358725	96312454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321495_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.39	chr15	-	4991	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-95	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTGTAATGGGATGTGC	NA	False	NA	-5	True	AATAAA	-20	NA	96358819	96312454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.4	chr15	-	7776	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	-53	-1957	-53	0	multi-exon	FALSE	canonical	3	72	junction_2	59.5770809240313	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGTGACTGTATAGTA	NA	False	NA	-2	True	NA	NA	NA	96358777	96309579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.40	chr15	-	4835	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.3534455510082	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96358693	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319854_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.41	chr15	-	4599	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.7261423011426	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96358765	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96316240_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.42	chr15	-	4399	14	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	36	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	77.1797257002873	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96344417	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313807_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390
ES.12664.43	chr15	-	4923	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.778829368968	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96358755	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330206_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.45	chr15	-	4838	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-4371	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.6159578509338	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96363095	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96362909
ES.12664.46	chr15	-	4819	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.5354772153617	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96358659	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329671_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.49	chr15	-	4663	14	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	73.6737570998459	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGTGTAATGGGATGT	NA	False	NA	-7	True	AATAAA	-18	NA	96358712	96312456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.5	chr15	-	7434	14	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.6837727531831	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGTGACTGTATAGTA	NA	False	NA	-2	True	NA	NA	NA	96358714	96309579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96314837_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.50	chr15	-	4932	16	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	102.451723048251	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGGGTGTAATGGGA	NA	False	NA	-10	True	AATAAA	-15	NA	96358705	96312459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96339703_96339812_96341825_96341984_96344390_96344473_96358482
ES.12664.54	chr15	-	4806	14	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	99.5457731234509	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGGGTGTAATGGG	NA	False	NA	-11	True	AATAAA	-14	NA	96358722	96312460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96358482
ES.12664.55	chr15	-	4916	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.3534455510082	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGGGTGTAATGGG	NA	False	NA	-11	True	AATAAA	-14	NA	96358758	96312460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319834_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.57	chr15	-	4572	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	11	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	100.717046568035	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGGGTGTAATGGG	NA	False	NA	-11	True	AATAAA	-14	NA	96358694	96312460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96316240_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.59	chr15	-	4916	16	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	102.21067567638	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAACCAAGGGTGTAAT	NA	False	NA	-14	True	AATAAA	-11	NA	96358712	96312463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96345904_96345994_96358482
ES.12664.60	chr15	-	4850	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	9	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.3346552480375	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAACCAAGGGTGTAA	NA	False	NA	-15	True	AATAAA	-10	NA	96358696	96312464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313021_96313605_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.61	chr15	-	4798	15	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.698605668964	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTTTTGTTCAAAATA	NA	False	NA	-90	True	GATAAA	-20	NA	96358724	96312539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314742_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.62	chr15	-	4877	16	NNC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.176765271007	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATATGTTTTGTTCAAAA	NA	False	NA	-92	True	GATAAA	-18	NA	96358681	96312541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96339703_96339815_96341825_96341984_96344390_96344473_96358482
ES.12664.63	chr15	-	2024	9	ISM	ENSMUSG00000033228.9	ENSMUST00000227069.2	4829	15	-145	8038	-126	-1810	5prime_fragment	FALSE	canonical	3	241	junction_4	24.1867732448956	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGAATTATTTTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	96358850	96320490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ES.12664.64	chr15	-	6926	3	ISM	ENSMUSG00000033228.9	ENSMUST00000227069.2	4829	15	-7	22917	-7	12251	5prime_fragment	FALSE	canonical	3	313	junction_2	1	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAGCAAAAAA	NA	False	NA	NA	False	TATAAA	-32	NA	96358712	96335369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96341984_96344390_96344473_96358482
ES.12664.65	chr15	-	8156	1	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	786	12109	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCAGTATTTCTAGTCA	NA	False	NA	NA	False	NA	NA	NA	96343667	96335511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96335500_96343700
ES.12664.66	chr15	-	6761	3	ISM	ENSMUSG00000033228.9	ENSMUST00000227069.2	4829	15	-7	23082	-7	12086	5prime_fragment	FALSE	canonical	3	313	junction_2	1	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	96358712	96335534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96341984_96344390_96344473_96358482
ES.12664.67	chr15	-	202	1	ISM	ENSMUSG00000033228.9	ENSMUST00000227133.2	2599	2	10574	285	-3654	-285	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	96348107	96347905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96347900_96348100
ES.12664.68	chr15	-	1352	1	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-7	-9716	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCTGTCTCTCCACAC	NA	False	NA	NA	False	AATAAA	-11	NA	96358688	96357336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96357300_96358700
ES.12664.7	chr15	-	7688	14	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	99.5457731234509	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGGTGACTGTATAG	NA	False	NA	-4	True	NA	NA	NA	96358725	96309581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96358482
ES.12664.9	chr15	-	4401	7	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	-25	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	133.305101177712	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTACTGGTGACTGTAT	NA	False	NA	-6	True	NA	NA	NA	96358749	96309583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96341825_96341984_96344390_96344473_96358482
ES.12665.1	chr15	-	210	1	Intergenic	novelGene_10562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	96390974	96390764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96390800_96391000
ES.12666.1	chr15	+	2524	2	FSM	ENSMUSG00000116160.2	ENSMUST00000229356.2	632	2	-9	-1883	-9	1883	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGAGTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	96395773	96398652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_96395869_96396223
ES.12667.1	chr15	+	179	1	Intergenic	novelGene_10563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTGAGAC	614	False	NA	NA	False	NA	NA	NA	96462059	96462238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96462100_96462200
ES.12668.1	chr15	+	2635	1	Intergenic	novelGene_10564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCAAGTATACAGCTTG	3387	False	NA	NA	False	NA	NA	NA	96464832	96467467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96464800_96467500
ES.12669.1	chr15	-	176	1	Intergenic	novelGene_10565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGGT	5521	False	NA	NA	False	NA	NA	NA	96469224	96469048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96469000_96469200
ES.1267.1	chr1	+	4639	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	-1220	2709	-1220	-2709	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTGGTATCTTAAAAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	130643843	130649386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_130645549_130646452
ES.1267.2	chr1	+	4935	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	-1217	2410	-1217	-2410	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTCATATTTTTTC	NA	False	NA	NA	False	AATACA	-28	NA	130643846	130649685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_130645549_130646452
ES.1267.3	chr1	+	1195	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	167	4766	167	-4766	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGATGTGTGTCTACAC	NA	False	NA	NA	False	ATTAAA	-15	NA	130645230	130647329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_130645549_130646452
ES.12670.1	chr15	+	7654	1	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTAGATCGAATTTTTC	9349	False	NA	NA	False	AAAAAG	-34	NA	96470794	96478448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96470800_96478400
ES.12670.2	chr15	+	3644	2	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTAGATCGAATTTTTC	NA	False	NA	NA	False	AAAAAG	-34	NA	96474352	96478448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96476742_96477193
ES.12670.3	chr15	+	3551	3	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTAGATCGAATTTTTC	NA	False	NA	NA	False	AAAAAG	-34	NA	96474352	96478448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96476511_96476603_96476742_96477193
ES.12671.1	chr15	+	3173	1	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAACTTTCCCTTCGA	8134	False	NA	NA	False	NA	NA	NA	96483021	96486194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96483000_96486200
ES.12672.1	chr15	+	177	1	Intergenic	novelGene_10566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	96525938	96526115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96525900_96526100
ES.12673.1	chr15	+	1184	1	Antisense	novelGene_ENSMUSG00000023169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGGAGGTCGAAATT	NA	False	NA	NA	False	NA	NA	NA	96540364	96541548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96540400_96541500
ES.12673.2	chr15	+	1403	1	Intergenic	novelGene_10569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTGTTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	96541083	96542486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96541100_96542500
ES.12674.1	chr15	-	7116	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-149	-1	0	1	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTCTCGTATGATTC	NA	False	NA	-16	True	ATTAAA	-17	NA	96540280	96469297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.11	chr15	-	7121	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-410	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	134.355274715026	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96541204	96469299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96541069
ES.12674.12	chr15	-	6710	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.145957704468	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96540263	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474308_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.13	chr15	-	7106	17	NNC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	102	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.561705390157	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96539991	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96472654_96473445_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.14	chr15	-	6771	15	NIC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-114	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	146.184901786074	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96540394	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.15	chr15	-	8744	15	NIC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-248	-2	intron_retention	FALSE	canonical	3	128	junction_14	92.9519570882217	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96541042	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.16	chr15	-	7051	17	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	430	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.498789432219	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96539413	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96472646_96472692_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96539156
ES.12674.17	chr15	-	5701	17	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.774933354512	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96540101	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96472710_96473942_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.19	chr15	-	8025	16	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.457149757343	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCGAGTCTCGTATGA	NA	False	NA	-19	True	ATTAAA	-14	NA	96540807	96469300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934_96539742_96540371
ES.12674.23	chr15	-	3874	2	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	4246	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCCGAGTCTCGTATG	1526	False	NA	-20	True	ATTAAA	-13	NA	96473219	96469301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96470573_96470616
ES.12674.24	chr15	-	7343	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	191	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	191.15405068622	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTCCGAGTCTCGTATG	NA	False	NA	-20	True	ATTAAA	-13	NA	96540603	96469301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488097_96488394_96490387_96490462_96499150_96499219_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.25	chr15	-	3162	9	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	-7557	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.999017292561	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTTCCGAGTCTCGTA	NA	False	NA	-22	True	ATTAAA	-11	NA	96485022	96469303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96471143_96474071_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972
ES.12674.27	chr15	-	6502	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-514	-569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	137.705740961479	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTTTCACTGTTAACGT	NA	False	NA	NA	False	NA	NA	NA	96541308	96469867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96541224
ES.12674.29	chr15	-	6751	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	425	-3993	425	-576	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTACGTTTTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	96539418	96469874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.3	chr15	-	7910	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	-157	-4570	93	1	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTCTCGTATGATTC	NA	False	NA	-16	True	ATTAAA	-17	NA	96540000	96469297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.30	chr15	-	6414	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-143	695	6	-695	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTCCTTATGCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	96540274	96469993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.31	chr15	-	6568	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	1	697	1	-697	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCTGATTCCTTATGCT	NA	False	NA	NA	False	AATAAA	-22	NA	96540793	96469995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.32	chr15	-	6786	17	NNC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	107	-697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	142.561705390157	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCTGATTCCTTATGCT	NA	False	NA	NA	False	AATAAA	-22	NA	96539986	96469995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934_96539486_96539897
ES.12674.33	chr15	-	6334	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	35	-697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	166.945287111942	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCTGATTCCTTATGCT	NA	False	NA	NA	False	AATAAA	-22	NA	96540245	96469995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490413_96490462_96507736_96507853_96514022_96514099_96521859_96522051_96540008
ES.12674.34	chr15	-	6464	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	363	-703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	120.117609033813	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTACTCTGATTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	96539480	96470001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96539156
ES.12674.35	chr15	-	4247	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	1	3018	1	1551	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCACTGTAGAGTGGAC	NA	False	NA	19	True	NA	NA	NA	96540793	96472316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.36	chr15	-	4064	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-145	3047	4	1522	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTGAGTAATTCCATAG	NA	False	NA	-10	True	AATATA	-27	NA	96540276	96472345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.37	chr15	-	4838	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	-143	-1512	107	1512	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAGGTACCACTGAGT	NA	False	NA	-20	True	AATATA	-17	NA	96539986	96472355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.38	chr15	-	3814	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3731	1456	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAACCCTCTTTGTGTA	NA	False	NA	-76	True	NA	NA	NA	96536112	96472411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
ES.12674.39	chr15	-	4142	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	-11	3135	-11	1434	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGGGTTTCTTTTT	NA	False	NA	-98	True	NA	NA	NA	96540805	96472433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.4	chr15	-	6936	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3722	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGAGTCTCGTATGATT	NA	False	NA	-17	True	ATTAAA	-16	NA	96536121	96469298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
ES.12674.40	chr15	-	3942	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-149	3173	0	1396	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATTTGCAGGAAGCA	NA	False	NA	NA	False	NA	NA	NA	96540280	96472471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.41	chr15	-	4623	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	-119	-1321	-119	1321	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTGCGATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	96539962	96472546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.42	chr15	-	3961	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	57	3248	57	1321	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTGCGATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	96540737	96472546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.45	chr15	-	3274	10	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	32	1312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	165.358197055161	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTGGGATGTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	96540248	96472555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482290_96490395_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.47	chr15	-	2530	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-133	4569	16	0	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGTTTGTTTCCCTC	NA	False	NA	-3	True	ATTAAA	-24	NA	96540264	96473867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.48	chr15	-	2315	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3773	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGGTTTGTTTCCCT	NA	False	NA	-4	True	ATTAAA	-23	NA	96536070	96473868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
ES.12674.49	chr15	-	2732	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-364	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	137.330676994436	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGGTTTGTTTCCCT	NA	False	NA	-4	True	ATTAAA	-23	NA	96541158	96473868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96540843
ES.12674.5	chr15	-	6869	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3751	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	119.397487410749	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGAGTCTCGTATGATT	NA	False	NA	-17	True	ATTAAA	-16	NA	96536092	96469298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536066
ES.12674.50	chr15	-	3368	17	NNC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	142.561705390157	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAATGGTTTGTTTCCC	NA	False	NA	-5	True	ATTAAA	-22	NA	96540144	96473869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934_96539043_96539156
ES.12674.51	chr15	-	1706	10	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	-10698	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	149.723531224952	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAATGGTTTGTTTCCC	NA	False	NA	-5	True	ATTAAA	-22	NA	96488163	96473869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96488074
ES.12674.52	chr15	-	2491	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-351	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	134.355274715026	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACAATGGTTTGTTTCC	NA	False	NA	-6	True	ATTAAA	-21	NA	96541145	96473870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96541069
ES.12674.54	chr15	-	3581	15	NIC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3	-11	intron_retention	FALSE	canonical	3	214	junction_14	72.4092676445241	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATCTCAGGAACAATGGT	NA	False	NA	-14	True	ATTAAA	-13	NA	96540277	96473878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.55	chr15	-	4184	11	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	-30296	-247	intron_retention	FALSE	canonical	0	0	junction_8	144.658943726269	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCCTATTTTGGTTA	NA	False	NA	NA	False	CATAAA	-1	NA	96507761	96474114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486542_96486892_96487940_96490462_96507736
ES.12674.58	chr15	-	2202	15	NIC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	27	-258	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	135.738193382913	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96540253	96474125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.6	chr15	-	7107	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	137.330676994436	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96540964	96469299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96540843
ES.12674.60	chr15	-	2312	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-173	4827	-24	-258	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96540304	96474125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.61	chr15	-	4180	10	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	-11606	-258	intron_retention	FALSE	non_canonical	0	0	junction_8	149.916602330499	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96489071	96474125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96486149_96486237_96486892_96487940
ES.12674.62	chr15	-	3075	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	-150	258	100	-258	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96539993	96474125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.63	chr15	-	2093	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3727	-269	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTTCATA	NA	False	NA	NA	False	NA	NA	NA	96536116	96474136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
ES.12674.64	chr15	-	3008	20	NNC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	-475	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	198.929587063911	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTTCATA	NA	False	NA	NA	False	NA	NA	NA	96541269	96474136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934_96539043_96539156_96539742_96540008_96540130_96540371_96540516_96541224
ES.12674.65	chr15	-	2232	17	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-358	-269	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	134.355274715026	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTTCATA	NA	False	NA	NA	False	NA	NA	NA	96541152	96474136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371_96540516_96541069
ES.12674.66	chr15	-	2241	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	17	-269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	131.943253795797	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTTCATA	NA	False	NA	NA	False	NA	NA	NA	96540263	96474136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521855_96522051_96540008
ES.12674.69	chr15	-	2433	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	45	-271	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	131.344263504561	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	96540235	96474138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488097_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.7	chr15	-	7423	16	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	141.716555921396	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96540749	96469299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488097_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.71	chr15	-	4113	16	NNC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	1	-271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	142.084481911291	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	96540793	96474138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96486149_96486237_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.72	chr15	-	2911	15	NIC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	-105	-318	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	151.320109404547	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTATATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	96539948	96474185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.73	chr15	-	2156	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	-154	4964	-5	-395	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGAAATCGTTTTC	NA	False	NA	NA	False	NA	NA	NA	96540285	96474262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ES.12674.74	chr15	-	3956	10	NIC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-65	-3550	intron_retention	FALSE	canonical	3	128	junction_9	107.895468388461	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTCTGGTTTTGTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	96540859	96482117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12674.75	chr15	-	2989	11	NNC	ENSMUSG00000023169.16	novel	3183	16	NA	NA	430	-3551	intron_retention	FALSE	canonical	0	0	junction_4	170.051051158174	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTCTGGTTTTGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	96539413	96482118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486542_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ES.12674.76	chr15	-	1654	2	Intergenic	novelGene_10568	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCCATAACACTGGCCT	NA	False	NA	NA	False	NA	NA	NA	96536104	96532401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96532497_96534545
ES.12674.77	chr15	-	3452	1	Intergenic	novelGene_10567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCCATAACACTGGCCT	NA	False	NA	NA	False	NA	NA	NA	96535853	96532401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96532400_96535900
ES.12674.78	chr15	-	3741	1	FSM	ENSMUSG00000023169.16	ENSMUST00000229253.2	3722	1	19	-38	19	38	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAGCAAACAAA	NA	False	NA	NA	False	AAGAAA	-36	NA	96540261	96536520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96536500_96540300
ES.12674.8	chr15	-	9575	14	NIC	ENSMUSG00000023169.16	novel	7266	16	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	128	junction_13	95.0526481333359	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGAGTCTCGTATGAT	NA	False	NA	-18	True	ATTAAA	-15	NA	96540832	96469299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ES.12675.1	chr15	-	4911	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-243	-8	-243	8	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTTTTGTTTCCTTCT	NA	False	NA	0	True	AATAAA	-24	NA	96597854	96585264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.10	chr15	-	4596	17	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.5465540997927	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597609	96585272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96586514_96586575_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.11	chr15	-	4111	8	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	4732	0	intron_retention	FALSE	canonical	3	301	junction_2	23.6574189079822	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	5724	False	NA	-8	True	AATAAA	-16	NA	96591840	96585272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590479_96590897_96591057_96591161_96591221_96591436
ES.12675.13	chr15	-	4621	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_15	74.6837480461594	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	NA	False	NA	-9	True	AATAAA	-15	NA	96597602	96585273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597317
ES.12675.14	chr15	-	4522	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-440	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	83.7718064479665	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	552	False	NA	-9	True	AATAAA	-15	NA	96597012	96585273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96596826
ES.12675.16	chr15	-	4626	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	83.9855543134254	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	NA	False	NA	-9	True	AATAAA	-15	NA	96597588	96585273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591510_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.18	chr15	-	3739	10	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	3423	-1	combination_of_known_splicesites	FALSE	canonical	1	9	junction_9	102.692757627477	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAGTAGGATTTTTTG	4415	False	NA	-9	True	AATAAA	-15	NA	96593149	96585273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96593096
ES.12675.2	chr15	-	4408	1	Genic_Genomic	ENSMUSG00000022462.8	novel	NA	NA	NA	NA	6897	5	mono-exon	FALSE	NA	NA	NA	NA	NA	498	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGATTTTTTGTTTCCT	7889	False	NA	-3	True	AATAAA	-21	NA	96589675	96585267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_96585300_96589700
ES.12675.20	chr15	-	4313	2	NIC	ENSMUSG00000022462.8	novel	6116	10	NA	NA	6895	-2	intron_retention	FALSE	canonical	3	301	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCAGTAGGATTTTTT	7887	False	NA	-10	True	AATAAA	-14	NA	96589677	96585274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96589088_96589177
ES.12675.24	chr15	-	5051	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	26	-2	intron_retention	FALSE	canonical	3	252	junction_14	30.4744791186169	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCAGTAGGATTTTTT	NA	False	NA	-10	True	AATAAA	-14	NA	96597585	96585274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.27	chr15	-	4436	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-30	254	-30	-254	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATCTAAAGCTTTAAA	NA	False	NA	-4	True	AATAAA	-25	NA	96597641	96585526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.29	chr15	-	4190	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	23	447	23	-447	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGGTTCAAGTGTATA	NA	False	NA	NA	False	AATAGA	-16	NA	96597588	96585719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.3	chr15	-	7200	14	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	5	intron_retention	FALSE	canonical	3	252	junction_13	31.2470590332091	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGATTTTTTGTTTCCT	NA	False	NA	-3	True	AATAAA	-21	NA	96597590	96585267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96596145_96596495_96596699_96597288
ES.12675.30	chr15	-	2634	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-18	2044	-18	229	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGCATGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	96597629	96587316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.32	chr15	-	2529	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	-27	2158	-27	115	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAATATTAGTATTA	NA	False	NA	10	True	AATAAA	-28	NA	96597638	96587430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.33	chr15	-	2389	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-23	95	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTTCATTGATATTT	NA	False	NA	-10	True	AATAAA	-8	NA	96597634	96587450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
ES.12675.5	chr15	-	4695	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	85.1477147863249	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGGATTTTTTGTTTC	NA	False	NA	-5	True	AATAAA	-19	NA	96597594	96585269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596194_96596495_96596699_96597288
ES.12675.6	chr15	-	4574	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-27	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGGATTTTTTGTTTC	NA	False	NA	-5	True	AATAAA	-19	NA	96597638	96585269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
ES.12675.7	chr15	-	4672	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.9386018997749	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGGATTTTTTGTTTC	NA	False	NA	-5	True	AATAAA	-19	NA	96597626	96585269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590290_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.8	chr15	-	4353	14	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.0122755401475	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597590	96585272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589584_96590901_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ES.12675.9	chr15	-	4892	14	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	14	junction_12	87.2283950294185	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597608	96585272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596699_96597288
ES.12676.1	chr15	+	611	3	Antisense	novelGene_ENSMUSG00000095638.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAGAAAAAAAAGAGAGCAA	9786	False	NA	NA	False	NA	NA	NA	96664767	96731118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96665030_96668773_96668919_96730914
ES.12676.2	chr15	+	175	1	Intergenic	novelGene_10570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAACTAAGGTATTAA	NA	False	NA	NA	False	NA	NA	NA	96681397	96681572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96681400_96681600
ES.12676.3	chr15	+	170	1	Intergenic	novelGene_10571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAATAATTTGAAG	4179	False	NA	NA	False	NA	NA	NA	96714552	96714722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96714600_96714700
ES.12677.1	chr15	-	153	1	Intergenic	novelGene_10572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96736714	96736561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96736600_96736700
ES.12678.1	chr15	-	207	1	Intergenic	novelGene_10573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGGTTTCTGAGGCAGCC	NA	False	NA	NA	False	NA	NA	NA	96821521	96821314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96821300_96821500
ES.12679.1	chr15	-	172	1	Intergenic	novelGene_10574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAAAACAATAAATA	NA	False	NA	NA	False	NA	NA	NA	96863140	96862968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96863000_96863100
ES.1268.1	chr1	-	3584	15	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-10	137	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.01492577818678	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTAGTGTTTCAGTT	3909	False	NA	NA	False	ATTAAA	-17	NA	130643561	130616781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.10	chr1	-	3694	17	NNC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.19833544724261	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGAAATTTTCAATTC	3913	False	NA	NA	False	AATAAA	-25	NA	130643557	130616920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130624753_130624827_130625642_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.11	chr1	-	3669	16	NNC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	6.66199836552233	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAATGAAATTTTCAATT	3887	False	NA	NA	False	AATAAA	-24	NA	130643583	130616921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130625619_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.12	chr1	-	4565	11	NNC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-7	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	12.3939501370628	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAATGAAATTTTCAAT	3912	False	NA	NA	False	AATAAA	-23	NA	130643558	130616922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627849_130628506_130628612_130629441_130630176_130634162_130634220_130634579_130634655_130634788_130635939_130642192_130642314_130643457
ES.1268.13	chr1	-	5496	1	FSM	ENSMUSG00000026409.15	ENSMUST00000187522.2	3057	1	-2437	-2	-2437	2	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTACAATGAAATTTTCAA	7201	False	NA	NA	False	AATAAA	-22	NA	130622419	130616923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130616900_130622400
ES.1268.14	chr1	-	5073	8	NNC	ENSMUSG00000026409.15	novel	1690	15	NA	NA	9943	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	6.82133507789333	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGGTACAATGAAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	130632369	130616927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130625619_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967
ES.1268.15	chr1	-	3638	16	NNC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.93582054927744	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAGGTACAATGAAAT	3901	False	NA	NA	False	AATAAA	-16	NA	130643569	130616929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130625619_130625823_130626415_130626481_130626924_130626988_130627717_130627839_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.16	chr1	-	4901	17	NNC	ENSMUSG00000026409.15	novel	4425	16	NA	NA	-178	-48	intron_retention	FALSE	canonical	0	0	junction_1	10.1425388217152	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAACATATACTGCTTT	2317	False	NA	NA	False	ATTAAA	-17	NA	130645153	130616973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618476_130618604_130618886_130624753_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130644480
ES.1268.17	chr1	-	4745	15	NNC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	0	-1240	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.78128158207068	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAAGGCTTCTGGTTTAT	3919	False	NA	-1	True	AATAAA	-23	NA	130643551	130619991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130622621_130625113_130625823_130626415_130626481_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.18	chr1	-	3150	2	NNC	ENSMUSG00000026409.15	novel	2223	12	NA	NA	-5462	-1241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAAGGCTTCTGGTTTA	4176	False	NA	-2	True	AATAAA	-22	NA	130625444	130619992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130622816_130625117
ES.1268.19	chr1	-	7387	15	NNC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	-585	-1241	intron_retention	FALSE	canonical	1	1	junction_14	7.61041177249554	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAAGGCTTCTGGTTTA	1910	False	NA	-2	True	AATAAA	-22	NA	130645560	130619992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130645379
ES.1268.2	chr1	-	5544	8	ISM	ENSMUSG00000026409.15	ENSMUST00000066863.13	4425	16	11642	-137	10483	136	3prime_fragment	FALSE	canonical	1	1	junction_1	8.07111250961459	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGTAGTGTTTCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	130631829	130616782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_130618886_130624753_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967
ES.1268.20	chr1	-	5870	16	NNC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	2	-1242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.64954610127657	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAAGGCTTCTGGTTT	3921	False	NA	-3	True	AATAAA	-21	NA	130643549	130619993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130623910_130625336_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.21	chr1	-	4938	17	NNC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	-6	-1244	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.6049443067845	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGGAAGGCTTCTGGT	3913	False	NA	-5	True	AATAAA	-19	NA	130643557	130619995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130622774_130625297_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130642409_130642569_130643457
ES.1268.22	chr1	-	7296	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-36	-4411	0	-1245	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTGGAAGGCTTCTGG	3919	False	NA	-6	True	AATAAA	-18	NA	130643551	130619996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.23	chr1	-	7331	15	NNC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	12	-1246	intron_retention	FALSE	canonical	0	0	junction_1	7.85746752575964	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTATTGGAAGGCTTCTG	3931	False	NA	-7	True	AATAAA	-17	NA	130643539	130619997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130625871_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.25	chr1	-	8234	11	NIC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	-10	-1248	intron_retention	FALSE	canonical	0	0	junction_2	8.40297566341829	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATTGGAAGGCTTC	3909	False	NA	-9	True	AATAAA	-15	NA	130643561	130619999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130625823_130626415_130626481_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130635939_130642202_130642314_130643457
ES.1268.26	chr1	-	7321	15	NIC	ENSMUSG00000026409.15	novel	2849	15	NA	NA	-18	-1248	intron_retention	FALSE	canonical	0	0	junction_13	7.85746752575964	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATTGGAAGGCTTC	3901	False	NA	-9	True	AATAAA	-15	NA	130643569	130619999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642192_130642314_130643457
ES.1268.27	chr1	-	3067	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-67	-151	-31	151	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCTCTTGAAAGTTT	3888	False	NA	NA	False	NA	NA	NA	130643582	130624256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.28	chr1	-	1909	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-34	974	2	52	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATAGACTTGGTTCTTC	3921	False	NA	NA	False	NA	NA	NA	130643549	130625381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.29	chr1	-	1619	14	ISM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-96	1919	-60	-893	5prime_fragment	FALSE	canonical	3	18	junction_4	4.4295938611963	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCCTGTATGTCTCTTT	3859	False	NA	NA	False	AAAACA	-12	NA	130643611	130626326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.3	chr1	-	6849	1	FSM	ENSMUSG00000026409.15	ENSMUST00000187522.2	3057	1	-3649	-143	-3649	136	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGTAGTGTTTCAGT	5989	False	NA	NA	False	ATTAAA	-16	NA	130623631	130616782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130616800_130623600
ES.1268.30	chr1	-	6756	1	NIC	ENSMUSG00000101904.2	novel	1909	18	NA	NA	8738	-30097	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTCTTGAACTGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	130634798	130628042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130628000_130634800
ES.1268.31	chr1	-	1931	8	ISM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	-36	7527	0	3382	5prime_fragment	FALSE	canonical	3	20	junction_6	3.04389653609465	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAAATGTCTGATCAG	3919	False	NA	NA	False	AATAAA	-21	NA	130643551	130631934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.4	chr1	-	4245	16	NNC	ENSMUSG00000026409.15	novel	4425	16	NA	NA	-205	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	8.33626615058165	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	2290	False	NA	NA	False	AATAAA	-26	NA	130645180	130616919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130625619_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130644480
ES.1268.5	chr1	-	3639	16	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	6.66199836552233	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	3896	False	NA	NA	False	AATAAA	-26	NA	130643574	130616919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130618886_130625642_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.6	chr1	-	5528	16	NNC	ENSMUSG00000026409.15	novel	4425	16	NA	NA	-196	0	intron_retention	FALSE	canonical	0	0	junction_7	10.5884633236157	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	2299	False	NA	NA	False	AATAAA	-26	NA	130645171	130616919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130618886_130624753_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629806_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130644271
ES.1268.7	chr1	-	3495	15	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	-60	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.01492577818678	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGAAATTTTCAATTC	3859	False	NA	NA	False	AATAAA	-25	NA	130643611	130616920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ES.1268.8	chr1	-	4025	15	NIC	ENSMUSG00000026409.15	novel	1690	15	NA	NA	-189	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	8.75400782848773	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGAAATTTTCAATTC	2306	False	NA	NA	False	AATAAA	-25	NA	130645164	130616920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130644480
ES.1268.9	chr1	-	3307	14	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	9.52604651102321	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGAAATTTTCAATTC	3931	False	NA	NA	False	AATAAA	-25	NA	130643539	130616920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130642192_130642314_130643457
ES.12680.1	chr15	+	161	1	Intergenic	novelGene_10575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	96888842	96889003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_96888800_96889000
ES.12681.1	chr15	-	178	1	Intergenic	novelGene_10576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	96890698	96890520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96890500_96890700
ES.12682.1	chr15	+	1177	1	Antisense	novelGene_ENSMUSG00000022464.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	96897513	96898690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_96897500_96898700
ES.12683.1	chr15	-	4204	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-2	-270	-2	267	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGCGGCAGAATTGTC	NA	False	NA	NA	False	NA	NA	NA	96953839	96892433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.10	chr15	-	4009	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-2014	4	at_least_one_novel_splicesite	FALSE	canonical	2	60	junction_15	395.078973821128	1380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96920217	96892696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96920045
ES.12683.11	chr15	-	3928	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	549.495388717888	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96953837	96892696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911322_96911393_96914015_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.12	chr15	-	3369	11	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	485.558657630569	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96953830	96892696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96906913_96914073_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.14	chr15	-	3965	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	936	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_15	408.178827911928	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCTTCTTTCGTGAG	642	False	NA	-6	True	AATAAA	-22	NA	96952901	96892697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96952772
ES.12683.15	chr15	-	3886	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.74480147823	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCTTCTTTCGTGAG	NA	False	NA	-6	True	AATAAA	-22	NA	96953851	96892697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894216_96894281_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.16	chr15	-	4165	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	624.267858675265	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCTTCTTTCGTGA	NA	False	NA	-7	True	AATAAA	-21	NA	96953837	96892698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96898211_96898347_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917836_96953735
ES.12683.17	chr15	-	4112	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-2404	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	409.635849125646	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCTTCTTTCGTGA	3171	False	NA	-7	True	AATAAA	-21	NA	96950372	96892698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96950095
ES.12683.19	chr15	-	4039	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	405.993836844299	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCTTCTTTCGTGA	NA	False	NA	-7	True	AATAAA	-21	NA	96953846	96892698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917836_96953735
ES.12683.2	chr15	-	4011	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-67	-12	-67	9	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCGTGAGTTATTT	NA	False	NA	0	True	AATAAA	-28	NA	96953904	96892691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.22	chr15	-	3730	14	NIC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	424.798302295497	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCTTCTTTCGTGA	NA	False	NA	-7	True	AATAAA	-21	NA	96953837	96892698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96917604_96917743_96953735
ES.12683.23	chr15	-	3897	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	405.939108734303	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCTTCTTTCGTGA	NA	False	NA	-7	True	AATAAA	-21	NA	96953817	96892698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908184_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.27	chr15	-	4882	13	NIC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	56	0	intron_retention	FALSE	canonical	3	1492	junction_5	82.5832912882503	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATGATCTTCTTTCGT	NA	False	NA	-9	True	AATAAA	-19	NA	96953781	96892700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.28	chr15	-	4010	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	521.835069580179	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATGATCTTCTTTCGT	NA	False	NA	-9	True	AATAAA	-19	NA	96953837	96892700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96933575_96933651_96953735
ES.12683.29	chr15	-	3884	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-3270	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	409.635849125646	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTATGATCTTCTTTCG	NA	False	NA	-10	True	AATAAA	-18	NA	96957107	96892701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96957055
ES.12683.3	chr15	-	3229	14	NNC	ENSMUSG00000022464.15	novel	3923	15	NA	NA	6459	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	572.429794666984	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTCGTGAGTTATT	NA	False	NA	-1	True	AATAAA	-27	NA	96911373	96892692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96892781_96892957_96893031_96893101_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318
ES.12683.30	chr15	-	4796	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-20549	1	intron_retention	FALSE	non_canonical	0	0	junction_15	406.366140321755	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATGATCTTCTTTC	NA	False	NA	-11	True	AATAAA	-17	NA	96974386	96892702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735_96953831_96974324
ES.12683.31	chr15	-	4010	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	408.883270492801	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATGATCTTCTTTC	NA	False	NA	-11	True	AATAAA	-17	NA	96953830	96892702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906209_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.33	chr15	-	3990	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	937	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	409.635849125646	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATGATCTTCTTTC	643	False	NA	-11	True	AATAAA	-17	NA	96952900	96892702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96952741
ES.12683.34	chr15	-	3909	16	FSM	ENSMUSG00000022464.15	ENSMUST00000230086.2	1963	16	0	-1946	0	1	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATGATCTTCTTTC	NA	False	NA	-11	True	AATAAA	-17	NA	96929092	96892702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96929014
ES.12683.36	chr15	-	3791	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.74480147823	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953781	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96893043_96893127_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.37	chr15	-	7207	14	NIC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	67	0	intron_retention	FALSE	canonical	3	1416	junction_7	97.9409917747543	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953770	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907887_96907995_96908079_96908164_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.38	chr15	-	4670	14	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	1039	0	intron_retention	FALSE	non_canonical	0	0	junction_12	570.453748598378	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	745	False	NA	-12	True	AATAAA	-16	NA	96952798	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96917538_96917743_96952741
ES.12683.39	chr15	-	2924	1	NIC	ENSMUSG00000022464.15	novel	3923	15	NA	NA	22205	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96895627	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96892700_96895600
ES.12683.4	chr15	-	3843	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	56	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	406.366140321755	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTCTTTCGTGAGTTA	NA	False	NA	-3	True	AATAAA	-25	NA	96953781	96892694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96906974_96907823_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.40	chr15	-	3890	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.74480147823	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953837	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96893061_96893102_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.41	chr15	-	3830	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	409.519306287533	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953768	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894962_96896345_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.42	chr15	-	3587	15	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	3153	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422.538393376923	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96914679	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96893311_96893362_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641
ES.12683.44	chr15	-	2461	4	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	10940	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	742.814018894815	1380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96906892	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897443_96906871
ES.12683.45	chr15	-	4095	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-2014	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	409.39299239511	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96920217	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917836_96920045
ES.12683.46	chr15	-	3997	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	536.217944117641	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953837	96892703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96895814_96895880_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.47	chr15	-	3890	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	409.397910215586	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGCTATGATCTTCT	NA	False	NA	-14	True	AATAAA	-14	NA	96953830	96892705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910841_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.48	chr15	-	3835	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	409.277607498871	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGCTATGATCTTCT	NA	False	NA	-14	True	AATAAA	-14	NA	96953781	96892705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908215_96910787_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.50	chr15	-	4031	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	536.464351098934	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGCTATGATCTTC	NA	False	NA	-15	True	AATAAA	-13	NA	96953846	96892706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96941538_96941632_96953735
ES.12683.52	chr15	-	3863	19	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	661.009593045945	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGTGGCTATGATCT	NA	False	NA	-17	True	AATAAA	-11	NA	96953830	96892708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96893004_96893065_96893605_96893674_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96933575_96933651_96953735
ES.12683.54	chr15	-	3528	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	58	346	58	-346	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTGGAAACCTGTG	NA	False	NA	NA	False	NA	NA	NA	96953779	96893049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.55	chr15	-	2907	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-20	1045	-20	897	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCAGTAATGCTCTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	96953857	96893748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.56	chr15	-	2649	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	9	1274	9	668	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATTTTGCTATATGTT	NA	False	NA	NA	False	GATAAA	-17	NA	96953828	96893977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.57	chr15	-	2012	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	-20	1940	-20	2	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGCAGTGCAGTGTGTG	NA	False	NA	-7	True	ATTAAA	-28	NA	96953857	96894643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.58	chr15	-	2056	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	536.464351098934	1333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGCAGTGCAGTGTGTG	NA	False	NA	-7	True	ATTAAA	-28	NA	96953840	96894643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96937716_96937778_96953735
ES.12683.60	chr15	-	1961	16	FSM	ENSMUSG00000022464.15	ENSMUST00000230086.2	1963	16	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGCCGTGCAGTGCA	NA	False	NA	-14	True	ATTAAA	-21	NA	96929092	96894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96929014
ES.12683.62	chr15	-	2799	4	ISM	ENSMUSG00000022464.15	ENSMUST00000166223.2	1908	16	12269	5	11898	-2	3prime_fragment	FALSE	canonical	3	1547	junction_1	33.8657480190367	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGCCGTGCAGTGCA	NA	False	NA	-14	True	ATTAAA	-21	NA	96905934	96894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700
ES.12683.63	chr15	-	2785	15	NIC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	8	-2	intron_retention	FALSE	canonical	3	1416	junction_7	94.5166004207834	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGCCGTGCAGTGCA	NA	False	NA	-14	True	ATTAAA	-21	NA	96953829	96894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.64	chr15	-	2023	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	405.993836844299	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGCCGTGCAGTGCA	NA	False	NA	-14	True	ATTAAA	-21	NA	96953782	96894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917836_96953735
ES.12683.65	chr15	-	2111	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	530.006688489636	1333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGCCGTGCAGTGCA	NA	False	NA	-14	True	ATTAAA	-21	NA	96953828	96894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96898211_96898347_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12683.66	chr15	-	2140	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-2007	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	409.39299239511	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGCCGTGCAGTGC	NA	False	NA	-15	True	ATTAAA	-20	NA	96920210	96894651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917836_96920045
ES.12683.67	chr15	-	1335	1	Intergenic	novelGene_10577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAAATGTATGAAATT	NA	False	NA	NA	False	NA	NA	NA	96969298	96967963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96968000_96969300
ES.12683.68	chr15	-	816	3	Intergenic	novelGene_10578	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAAATGTATGAAATT	NA	False	NA	NA	False	NA	NA	NA	96975945	96967963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_96968444_96971021_96971248_96975835
ES.12683.8	chr15	-	4221	16	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-4756	4	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_15	389.749229918703	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96958593	96892696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96958209
ES.12683.9	chr15	-	4086	17	NNC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	530.006688489636	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTTCTTTCGTGAGT	NA	False	NA	-5	True	AATAAA	-23	NA	96953849	96892696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_96894973_96896323_96896422_96897369_96897515_96898211_96898347_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ES.12684.1	chr15	-	138	1	Intergenic	novelGene_10579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	9907	False	NA	NA	False	NA	NA	NA	97010443	97010305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97010300_97010400
ES.12685.1	chr15	+	171	1	Intergenic	novelGene_10581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATCTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97023330	97023501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97023300_97023500
ES.12686.1	chr15	+	242	1	Intergenic	novelGene_10582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAACAATATACAGGGACA	NA	False	NA	77	True	NA	NA	NA	97024525	97024767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97024500_97024800
ES.12687.1	chr15	-	7022	1	Intergenic	novelGene_10580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	1436	False	NA	NA	False	NA	NA	NA	97029777	97022755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97022800_97029800
ES.12687.2	chr15	-	639	4	Intergenic	novelGene_10584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	11	junction_1	2.62466929133727	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGTTTCTAGAATTTG	1460	False	NA	-1	True	AATACA	-23	NA	97029753	97026298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97026566_97026963_97027102_97029108_97029265_97029675
ES.12687.3	chr15	-	1037	3	Intergenic	novelGene_10585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGTTTCTAGAATTTG	1460	False	NA	-1	True	AATACA	-23	NA	97029753	97026298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97027102_97029108_97029265_97029675
ES.12687.4	chr15	-	478	3	Intergenic	novelGene_10583	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	5	junction_2	3	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGTTTCTAGAATTTG	1465	False	NA	-1	True	AATACA	-23	NA	97029748	97026298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97026566_97026963_97027102_97029675
ES.12687.5	chr15	-	1248	3	Intergenic	novelGene_10586	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTGAGTTTCTAGAATT	1450	False	NA	-3	True	AATACA	-21	NA	97029763	97026300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97026566_97026777_97027102_97029104
ES.12687.6	chr15	-	1398	2	Intergenic	novelGene_10587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	16	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGACCCATCCGTGCTG	1444	False	NA	-67	True	ACTAAA	-26	NA	97029769	97026364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97027102_97029108
ES.12688.1	chr15	-	5623	6	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	1547	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	327.911329477955	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTGGTAACAGCATTT	NA	False	NA	NA	False	AATAAA	-14	NA	97065125	97053362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97054549_97055073_97056207_97056276_97059277_97059835_97059964_97064383_97064492_97065057
ES.12688.10	chr15	-	1753	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-28	942	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGCTTGCTTGCTT	NA	False	NA	-4	True	NA	NA	NA	97065153	97057871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.11	chr15	-	1626	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-30	-941	-30	941	multi-exon	FALSE	canonical	3	219	junction_1	244.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065155	97057872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97059277_97064383_97064508_97065057
ES.12688.13	chr15	-	1853	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-56	940	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	335.890607192282	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	-6	True	NA	NA	NA	97065181	97057873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
ES.12688.14	chr15	-	1595	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-16	940	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACTGTTGCTTGCTTGC	NA	False	NA	-6	True	NA	NA	NA	97065141	97057873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97064383_97064492_97065057
ES.12688.15	chr15	-	1667	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-7	937	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	291.130018204925	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCACTGTTGCTTGCT	NA	False	NA	-9	True	NA	NA	NA	97065132	97057876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97058277_97058318_97059277_97059837_97059964_97064383_97064492_97065057
ES.12688.16	chr15	-	1047	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-26	238	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTCATAAGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	97065151	97058575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.17	chr15	-	6503	1	Genic_Genomic	ENSMUSG00000116295.2	novel	NA	NA	NA	NA	-30	161	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065155	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_97058700_97065200
ES.12688.18	chr15	-	952	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-25	-417	-24	161	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065149	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ES.12688.19	chr15	-	5920	2	ISM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-7	-417	-6	161	intron_retention	FALSE	canonical	3	745	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065131	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97059277_97059835
ES.12688.2	chr15	-	4732	7	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-12	554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.436916151261	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCCTCATTTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	97065137	97054355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97054549_97055073_97056207_97056276_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
ES.12688.20	chr15	-	1015	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	1	161	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	335.890607192282	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065122	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
ES.12688.21	chr15	-	1390	2	ISM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-24	-161	-24	161	intron_retention	FALSE	canonical	3	219	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065149	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97059277_97064383
ES.12688.22	chr15	-	6145	2	ISM	ENSMUSG00000116295.2	ENSMUST00000229491.2	372	3	-21	-5186	0	161	intron_retention	FALSE	canonical	3	69	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065124	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97064057_97064383
ES.12688.23	chr15	-	951	4	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-12	161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	343.682346877979	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065137	97058652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97064383_97064510_97065064
ES.12688.24	chr15	-	1180	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-12	160	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_3	354.036986062191	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTAATTGCAATCCAG	NA	False	NA	NA	False	NA	NA	NA	97065137	97058653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063549_97063775_97064383_97064508_97065057
ES.12688.25	chr15	-	809	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-16	-138	-16	138	multi-exon	FALSE	canonical	3	219	junction_1	244.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065141	97058675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97059277_97064383_97064508_97065057
ES.12688.26	chr15	-	1436	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-9	137	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	339.826702158615	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065134	97058676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063549_97064057_97064383_97064508_97065057
ES.12688.27	chr15	-	922	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-4	135	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97065129	97058678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.28	chr15	-	643	3	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	28	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACCATAGCCATTTTA	NA	False	NA	-3	True	AATAAA	-24	NA	97065122	97058806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97064383_97064492_97065057
ES.12688.29	chr15	-	815	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-27	5	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATACCATAGCCATTT	NA	False	NA	-5	True	AATAAA	-22	NA	97065152	97058808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.3	chr15	-	4656	6	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-10	554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.776200443162	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCCTCATTTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	97065135	97054355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97054549_97055073_97056207_97056276_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.30	chr15	-	798	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	-27	-261	-26	5	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATACCATAGCCATTT	NA	False	NA	-5	True	AATAAA	-22	NA	97065151	97058808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ES.12688.31	chr15	-	862	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	335.890607192282	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGATCATACCATAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	97065129	97058812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
ES.12688.32	chr15	-	751	4	NNC	ENSMUSG00000116295.2	novel	655	3	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	316.053089773784	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065149	97058815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97063982_97064057_97064383_97064508_97065057
ES.12688.33	chr15	-	1096	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	356.091543707513	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065149	97058815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063549_97063841_97064383_97064508_97065057
ES.12688.34	chr15	-	670	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	-17	2	-17	-2	multi-exon	FALSE	canonical	3	219	junction_1	244.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065142	97058815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97059277_97064383_97064508_97065057
ES.12688.36	chr15	-	1142	6	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	340.782276534447	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGATCATACCATA	NA	False	NA	-12	True	AATAAA	-15	NA	97065121	97058815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063549_97063841_97063982_97064057_97064383_97064508_97065057
ES.12688.38	chr15	-	707	4	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	113.598708912851	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATCCTGATCATACCAT	NA	False	NA	-13	True	AATAAA	-14	NA	97065122	97058816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97063982_97064057_97064383_97064492_97065057
ES.12688.39	chr15	-	938	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-14	-84	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	354.036986062191	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGGATTCTCTTTTTT	NA	False	NA	-29	True	GATAAA	-17	NA	97065139	97058897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97063549_97063775_97064383_97064508_97065057
ES.12688.4	chr15	-	4519	6	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-14	406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	353.776200443162	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATATGTTATTGGATCT	NA	False	NA	NA	False	TTTAAA	-22	NA	97065139	97054503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97054549_97055073_97056240_97056302_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.40	chr15	-	850	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-24	-84	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	299.778668353837	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGGATTCTCTTTTTT	NA	False	NA	-29	True	GATAAA	-17	NA	97065149	97058897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97061129_97061273_97064383_97064492_97065057
ES.12688.41	chr15	-	631	4	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	343.682346877979	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCAGGATTCTCTTTTT	NA	False	NA	-30	True	GATAAA	-16	NA	97065123	97058898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97059277_97059835_97059964_97064383_97064443_97065057
ES.12688.5	chr15	-	2830	2	ISM	ENSMUSG00000116295.2	ENSMUST00000229245.2	593	4	3767	-347	3747	347	3prime_fragment	FALSE	canonical	1	3	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTGAATAAGCAGCTA	NA	False	NA	NA	False	NA	NA	NA	97061356	97054562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97055131_97059094
ES.12688.6	chr15	-	797	4	NNC	ENSMUSG00000116295.2	novel	593	4	NA	NA	-14	36	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	112.19130487203	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAGAGAAAGTAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	97065139	97054873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97055131_97058926_97059277_97064383_97064492_97065057
ES.12688.7	chr15	-	3151	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-10	-1546	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAACGTTGGCTGCT	NA	False	NA	NA	False	ACTAAA	-17	NA	97065135	97056455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
ES.12688.9	chr15	-	1610	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	-16	943	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.302907149933	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGCTTGCTTGCTTG	NA	False	NA	-3	True	NA	NA	NA	97065141	97057870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97057936_97058051_97059277_97059835_97059964_97064383_97064492_97065057
ES.12689.1	chr15	+	816	2	Intergenic	novelGene_10588	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTCTATTTTAAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	97070622	97071784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97070924_97071269
ES.1269.1	chr1	+	579	1	ISM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	6452	1	6452	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCGAGCATATTTTG	NA	False	NA	20	True	AATAAA	-15	NA	130651515	130652094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_130651500_130652100
ES.12690.1	chr15	-	930	4	Intergenic	novelGene_10589	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAATCTTTTGTATTGA	NA	False	NA	NA	False	NA	NA	NA	97101685	97085286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97085700_97097494_97097614_97099407_97099522_97101401
ES.12690.2	chr15	-	1563	5	Intergenic	novelGene_10590	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGACTGTAGGTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	97101722	97094985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97095876_97096754_97096874_97097494_97097614_97099407_97099522_97101401
ES.12691.1	chr15	+	2430	5	NNC	ENSMUSG00000044250.9	novel	441	2	NA	NA	-11431	14	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.22474487139159	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCTGCCTGTTGTGTGT	NA	False	NA	28	True	AATAAA	-29	NA	97133556	97283575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97134036_97175214_97175298_97177731_97177797_97259080_97259217_97281908
ES.12691.11	chr15	+	2335	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15406	16	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCCTGTTGTGTGTGT	NA	False	NA	30	True	AATAAA	-31	NA	97274503	97283577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97275170_97281908
ES.12691.13	chr15	+	7348	1	Genic_Genomic	ENSMUSG00000044250.9	novel	NA	NA	NA	NA	17125	9	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGGTTCTGCCTGTTG	NA	False	NA	23	True	AATAAA	-24	NA	97276222	97283570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_97276200_97283600
ES.12691.14	chr15	+	1669	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	22419	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAATACA	NA	False	NA	-9	True	NA	NA	NA	97281516	97283538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97281556_97281908
ES.12691.2	chr15	+	2550	6	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	-11391	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1.4142135623731	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAATACA	NA	False	NA	-9	True	NA	NA	NA	97133596	97283538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97134036_97175214_97175298_97177731_97177797_97259080_97259217_97271836_97272031_97281905
ES.12691.3	chr15	+	2683	7	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	-11391	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.88561808316413	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCTGCCTGTTGTGTG	NA	False	NA	27	True	AATAAA	-28	NA	97133596	97283574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97134036_97175214_97175298_97177731_97177797_97240435_97240533_97259080_97259217_97271836_97272031_97281905
ES.12691.4	chr15	+	2433	5	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	-11389	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.29128784747792	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAATACA	NA	False	NA	-9	True	NA	NA	NA	97133598	97283538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97134036_97175214_97175298_97177652_97177797_97259080_97259217_97281905
ES.12691.6	chr15	+	2097	5	NIC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	-125	-19	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.06155281280883	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAATACA	NA	False	NA	-9	True	NA	NA	NA	97144862	97283538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97145046_97175214_97175298_97177731_97177797_97259080_97259217_97281908
ES.12691.7	chr15	+	175	1	Intergenic	novelGene_10591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTATATTAAAAAAA	5368	False	NA	NA	False	NA	NA	NA	97252787	97252962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97252800_97253000
ES.12691.8	chr15	+	176	1	Intergenic	novelGene_10592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGCATCGGGTCATAAC	8695	False	NA	NA	False	NA	NA	NA	97256114	97256290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97256100_97256300
ES.12691.9	chr15	+	1796	2	FSM	ENSMUSG00000044250.9	ENSMUST00000226495.2	441	2	-28	-1327	-13	0	multi-exon	FALSE	canonical	3	6	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTTTCCAAAAGTG	NA	False	NA	10	True	AATAAA	-11	NA	97259069	97283557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97259217_97281908
ES.12692.1	chr15	-	2702	2	NNC	ENSMUSG00000048218.7	novel	2801	2	NA	NA	-402	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGTTGAGCTGAGCT	NA	False	NA	NA	False	AATAGA	-19	NA	97145570	97142493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97144479_97144853
ES.12693.1	chr15	-	2133	1	Antisense	novelGene_ENSMUSG00000044250.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAATAAATAGGAAG	NA	False	NA	NA	False	NA	NA	NA	97283039	97280906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_97280900_97283000
ES.12694.1	chr15	+	182	1	Intergenic	novelGene_10593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97301289	97301471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97301300_97301500
ES.12695.1	chr15	-	177	1	Intergenic	novelGene_10594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTTCAGATAAAT	NA	False	NA	NA	False	NA	NA	NA	97324708	97324531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97324500_97324700
ES.12696.1	chr15	-	193	1	Intergenic	novelGene_10595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGAAGTT	3109	False	NA	NA	False	AAGAAA	-21	NA	97335380	97335187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97335200_97335400
ES.12697.1	chr15	+	159	1	Intergenic	novelGene_10596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	97351259	97351418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97351300_97351400
ES.12698.1	chr15	+	1288	1	Intergenic	novelGene_10597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAAGACTGTTTCTTGT	3801	False	NA	NA	False	NA	NA	NA	97389253	97390541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97389300_97390500
ES.12699.1	chr15	+	211	1	Intergenic	novelGene_10598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTCTGAAGTCCAACG	NA	False	NA	NA	False	NA	NA	NA	97417627	97417838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97417600_97417800
ES.127.1	chr1	-	3514	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTATTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	13690382	13686868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_13686900_13690400
ES.1270.1	chr1	+	1925	1	Genic_Genomic	ENSMUSG00000042510.8	novel	NA	NA	NA	NA	-1251	-9814	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACAAAATCCACCTT	NA	False	NA	NA	False	NA	NA	NA	130658461	130660386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_130658500_130660400
ES.1270.2	chr1	+	2898	4	FSM	ENSMUSG00000042510.8	ENSMUST00000039323.8	2909	4	7	4	7	-3	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATTCTGGAGTCCCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	130659719	130672355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_130659961_130665238_130665425_130668739_130668921_130670065
ES.12700.1	chr15	-	174	1	Intergenic	novelGene_10599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATATAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	97423351	97423177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97423200_97423400
ES.12701.1	chr15	-	253	1	Intergenic	novelGene_10600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTCTACCAAAGGACAG	NA	False	NA	NA	False	NA	NA	NA	97424892	97424639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97424600_97424900
ES.12702.1	chr15	+	163	1	Intergenic	novelGene_10601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAGGGGATTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	97443514	97443677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97443500_97443700
ES.12703.1	chr15	-	169	1	Intergenic	novelGene_10602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97552151	97551982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97552000_97552200
ES.12704.1	chr15	-	2286	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	-14	-1	-14	1	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTCGATATTTCATTTT	NA	False	NA	-2	True	AATAAA	-26	NA	97603720	97572976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.10	chr15	-	5247	16	NIC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	23	-7	intron_retention	FALSE	canonical	3	236	junction_15	36.3587067365653	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAGGGTCGATAT	NA	False	NA	-10	True	AATAAA	-18	NA	97603683	97572984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.11	chr15	-	5285	16	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	5	-7	intron_retention	FALSE	canonical	1	1	junction_9	83.8349171487235	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAGGGTCGATAT	NA	False	NA	-10	True	AATAAA	-18	NA	97603701	97572984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589212_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.12	chr15	-	2216	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	20	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.642560857873	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTATAAGGGTCGATA	NA	False	NA	-11	True	AATAAA	-17	NA	97603686	97572985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577022_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.13	chr15	-	2417	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	84	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	81.2449998461444	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTATAAGGGTCGATA	NA	False	NA	-11	True	AATAAA	-17	NA	97603622	97572985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603392
ES.12704.15	chr15	-	2272	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.210201677592	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATCTATAAGGGTCGAT	NA	False	NA	-12	True	AATAAA	-16	NA	97603701	97572986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589212_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596915_97598948_97599093_97601082_97601251_97603630
ES.12704.16	chr15	-	855	6	ISM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	37	18876	37	-13594	5prime_fragment	FALSE	canonical	3	236	junction_5	28.1595454508769	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTCGTTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	97603669	97591853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.2	chr15	-	2158	16	NIC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	41	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	84.8885282133117	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGTCGATATTTCATT	NA	False	NA	-4	True	AATAAA	-24	NA	97603665	97572978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.4	chr15	-	2250	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	82.2060815496639	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGGTCGATATTTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	97603693	97572979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591990_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.5	chr15	-	3379	16	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	7	-2	intron_retention	FALSE	canonical	1	1	junction_9	84.3367851730983	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGGTCGATATTTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	97603699	97572979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589212_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12704.6	chr15	-	8873	9	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	6896	-4	intron_retention	FALSE	canonical	1	1	junction_6	110.921143160355	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGGGTCGATATTTC	NA	False	NA	-7	True	AATAAA	-21	NA	97596810	97572981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97577049_97578215_97579721_97581707_97581985_97584322_97584445_97585991_97586120_97589062_97589212_97591094_97591166_97591984_97592107_97594378
ES.12704.8	chr15	-	3566	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	1391	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	107.539527616593	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTATAAGGGTCGATATT	NA	False	NA	-9	True	AATAAA	-19	NA	97602315	97572983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97587652_97587965_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082
ES.12704.9	chr15	-	2299	17	NNC	ENSMUSG00000022466.7	novel	2271	17	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	81.9067448001079	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAGGGTCGATAT	NA	False	NA	-10	True	AATAAA	-18	NA	97603696	97572984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578448_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ES.12705.1	chr15	-	1792	3	ISM	ENSMUSG00000022468.13	ENSMUST00000023105.5	2408	9	6873	3	6873	-3	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTCATCCTTGTA	NA	False	NA	NA	False	ATTAAA	-19	NA	97612158	97608898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97610051_97610838_97610982_97611661
ES.12706.1	chr15	+	1652	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	0	884	0	561	multi-exon	TRUE	canonical	3	145	junction_2	1	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGTGTTTCTTTGGGG	NA	False	NA	14	True	AATACA	-19	NA	97682235	97689689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97682498_97687783_97687952_97688467
ES.12706.2	chr15	+	2527	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	7	2	7	-2	multi-exon	FALSE	canonical	3	145	junction_2	1	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTTTTTTTTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	97682242	97690571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97682498_97687783_97687952_97688467
ES.12706.3	chr15	+	3830	3	NNC	ENSMUSG00000081534.4	novel	2536	3	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTTTTTTTTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	97682247	97690571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97683556_97687533_97687952_97688467
ES.12706.4	chr15	+	1567	3	NNC	ENSMUSG00000081534.4	novel	2536	3	NA	NA	36	559	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	69.5	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGGGTGTTTCTTTGG	NA	False	NA	12	True	AATACA	-17	NA	97682271	97689687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97682498_97687830_97687952_97688467
ES.12706.5	chr15	+	2329	3	NIC	ENSMUSG00000081534.4	novel	404	3	NA	NA	2410	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	71.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTTTTTTTTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	97684779	97690571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97684837_97687783_97687952_97688467
ES.12707.1	chr15	-	3966	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-126	165	0	18	multi-exon	TRUE	canonical	3	28	junction_8	8.12572672702261	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGTGGCTGGGAAAG	53	False	NA	0	True	CATAAA	-31	NA	97665853	97642815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.10	chr15	-	5523	6	NIC	ENSMUSG00000022469.18	novel	2612	24	NA	NA	-2575	0	intron_retention	FALSE	canonical	3	28	junction_5	11.1103555298649	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	NA	False	NA	-18	True	CATAAA	-13	NA	97651161	97642833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97648069_97648149
ES.12707.11	chr15	-	3666	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.4657961847684	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	311	False	NA	-18	True	CATAAA	-13	NA	97665595	97642833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655564_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658606_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.13	chr15	-	3511	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	14.5048121242554	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	720	False	NA	-18	True	CATAAA	-13	NA	97665186	97642833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658638_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665054
ES.12707.15	chr15	-	4501	27	NIC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	28	junction_7	7.82992288006033	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTGTTCTACCGCCT	324	False	NA	-19	True	CATAAA	-12	NA	97665582	97642834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.16	chr15	-	3583	29	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	60	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.8942801327799	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTGTTCTACCGCC	113	False	NA	-20	True	CATAAA	-11	NA	97665793	97642835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655390_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275_97665423_97665724
ES.12707.2	chr15	-	3012	24	NNC	ENSMUSG00000022469.18	novel	3395	27	NA	NA	-62	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	15.6054859240677	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGGTGTGTGGCTGGG	699	False	NA	-4	True	CATAAA	-27	NA	97665207	97642819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657841_97657931_97658459_97658587_97665045
ES.12707.20	chr15	-	3664	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	14.0536889406129	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	330	False	NA	-28	True	CATAAA	-3	NA	97665576	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657921_97658455_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.22	chr15	-	3725	28	FSM	ENSMUSG00000022469.18	ENSMUST00000129223.9	3750	28	15	10	15	-7	multi-exon	FALSE	canonical	3	6	junction_8	10.6521248612827	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	242	False	NA	-28	True	CATAAA	-3	NA	97665664	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.23	chr15	-	3717	27	NNC	ENSMUSG00000022469.18	novel	3395	27	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	14.3384697920082	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	48	False	NA	-28	True	CATAAA	-3	NA	97665858	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659587_97665270
ES.12707.24	chr15	-	4824	25	NIC	ENSMUSG00000022469.18	novel	3750	28	NA	NA	-49	-7	intron_retention	FALSE	canonical	3	6	junction_8	11.0629511835174	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	130	False	NA	-28	True	CATAAA	-3	NA	97665776	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97656385_97656722_97657120_97657205_97657267_97657845_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.25	chr15	-	6097	21	NIC	ENSMUSG00000022469.18	novel	3395	27	NA	NA	-271	-7	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	8.30225872880387	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	7329	False	NA	-28	True	CATAAA	-3	NA	97658577	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459
ES.12707.26	chr15	-	6210	27	NIC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	9	-7	intron_retention	FALSE	canonical	3	28	junction_8	8.20674062682478	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	62	False	NA	-28	True	CATAAA	-3	NA	97665844	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.27	chr15	-	3036	17	NIC	ENSMUSG00000022469.18	novel	2612	24	NA	NA	-368	-7	intron_retention	FALSE	canonical	3	28	junction_8	8.32330125310865	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	9154	False	NA	-28	True	CATAAA	-3	NA	97656752	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97656385_97656722
ES.12707.28	chr15	-	3538	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	11.943741007136	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	438	False	NA	-28	True	CATAAA	-3	NA	97665468	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659574_97659614_97664642_97664856_97665275
ES.12707.3	chr15	-	3715	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-49	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.0505651610285	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGGTGTGTGGCTGGG	310	False	NA	-4	True	CATAAA	-27	NA	97665596	97642819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655390_97655561_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.30	chr15	-	5098	23	NIC	ENSMUSG00000022469.18	novel	3586	27	NA	NA	5	-7	intron_retention	FALSE	canonical	3	28	junction_6	8.09767337261678	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	366	False	NA	-28	True	CATAAA	-3	NA	97665540	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97656385_97656722_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.32	chr15	-	3942	27	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-29	-7	intron_retention	FALSE	non_canonical	0	0	junction_15	12.1153846153846	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	330	False	NA	-28	True	CATAAA	-3	NA	97665576	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655394_97655570_97655643_97655897_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.33	chr15	-	3385	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	11.7806891346958	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	615	False	NA	-28	True	CATAAA	-3	NA	97665291	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658638_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.36	chr15	-	3871	23	NNC	ENSMUSG00000022469.18	novel	3395	27	NA	NA	188	-7	intron_retention	FALSE	canonical	1	1	junction_18	12.7159040133226	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATACGTGTGTGTT	1167	False	NA	-28	True	CATAAA	-3	NA	97664739	97642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655391_97655563_97655643_97655897_97656385_97656722_97657267_97657845_97657926_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642
ES.12707.38	chr15	-	3690	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	-117	432	9	-34	multi-exon	FALSE	canonical	3	28	junction_8	8.12572672702261	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCGCCAGGCCTCGT	62	False	NA	NA	False	NA	NA	NA	97665844	97643082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.40	chr15	-	3726	24	NNC	ENSMUSG00000022475.20	novel	4113	25	NA	NA	-3370	28335	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.24666262502231	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTACTGCATTAGCGT	NA	False	NA	NA	False	NA	NA	NA	97709235	97662209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97662217_97690577_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143
ES.12707.41	chr15	-	4104	26	NNC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	7.93735472307998	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTCCTTGGGAGAACG	2281	False	NA	-2	True	AATATA	-14	NA	97729357	97690546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705649_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97723386_97723508_97724615_97724673_97729239
ES.12707.42	chr15	-	4351	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_20	5.27029806241228	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTTTATTTGCTTTA	1971	False	NA	-19	True	NA	NA	NA	97729667	97690563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ES.12707.43	chr15	-	4567	22	NIC	ENSMUSG00000022475.20	novel	4226	24	NA	NA	3293	-2	intron_retention	FALSE	canonical	2	7	junction_19	5.42146569199078	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTTTATTTGCTTTA	NA	False	NA	-19	True	NA	NA	NA	97709451	97690563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97708846_97709143_97709235_97709318
ES.12707.44	chr15	-	4094	26	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	6.81762421962372	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATATGTTTTATTTGCT	2282	False	NA	-22	True	NA	NA	NA	97729356	97690566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97724615_97724673_97729239
ES.12707.45	chr15	-	4218	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	-3	8	-3	-1	multi-exon	FALSE	canonical	2	7	junction_19	5.55841976156414	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATATATGTTTTATTT	1987	False	NA	-25	True	NA	NA	NA	97729651	97690569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ES.12707.46	chr15	-	4031	23	NNC	ENSMUSG00000022475.20	novel	4223	24	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.27223318212175	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAACAATATATGTTT	2256	False	NA	-30	True	NA	NA	NA	97729382	97690574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695919_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ES.12707.47	chr15	-	4002	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	7.0443781761692	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAACAATATATGTTT	2255	False	NA	-30	True	NA	NA	NA	97729383	97690574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97724615_97724673_97729239
ES.12707.48	chr15	-	4595	13	NNC	ENSMUSG00000022475.20	novel	4226	24	NA	NA	-178	-4	intron_retention	FALSE	canonical	0	0	junction_12	7.27820185363268	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGAACAATATATGTTT	NA	False	NA	-30	True	NA	NA	NA	97706043	97690574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97695920_97696104_97696225_97697437_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705666_97705845
ES.12707.49	chr15	-	3987	25	NNC	ENSMUSG00000022475.20	novel	4113	25	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	6.21699619323244	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGTGAAAA	1814	False	NA	-61	True	NA	NA	NA	97729824	97690605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729718
ES.12707.5	chr15	-	3778	27	NIC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-60	12	intron_retention	FALSE	canonical	2	4	junction_8	11.119110368398	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCTGGGTGTGTGGCTG	299	False	NA	-6	True	CATAAA	-25	NA	97665607	97642821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659614_97664642_97664856_97665275
ES.12707.50	chr15	-	4815	23	NIC	ENSMUSG00000022475.20	novel	4223	24	NA	NA	-8	0	intron_retention	FALSE	canonical	2	7	junction_18	5.66871215715361	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGTGAAAA	2280	False	NA	-61	True	NA	NA	NA	97729358	97690605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ES.12707.51	chr15	-	4019	25	NIC	ENSMUSG00000022475.20	novel	4069	26	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	6.1065481702477	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGTGAAAA	2240	False	NA	-61	True	NA	NA	NA	97729398	97690605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705649_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ES.12707.6	chr15	-	3320	28	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-941	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	14.6009564299538	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGCCTGGGTGTGTGGCT	5205	False	NA	-7	True	CATAAA	-24	NA	97660701	97642822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97659700_97659823_97660671
ES.12707.7	chr15	-	3766	27	NNC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	-29	11	intron_retention	FALSE	non_canonical	0	0	junction_17	14.8328457690852	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGCCTGGGTGTGTGGCT	330	False	NA	-7	True	CATAAA	-24	NA	97665576	97642822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656281_97656385_97656722_97656870_97657042_97657267_97657845_97657931_97658459_97658637_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12707.8	chr15	-	3568	29	NIC	ENSMUSG00000022469.18	novel	4005	28	NA	NA	56	11	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	13.2252849975078	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGCCTGGGTGTGTGGCT	109	False	NA	-7	True	CATAAA	-24	NA	97665797	97642822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275_97665423_97665724
ES.12707.9	chr15	-	4693	27	NIC	ENSMUSG00000022469.18	novel	3750	28	NA	NA	60	4	intron_retention	FALSE	canonical	3	6	junction_7	10.4722795538151	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTACCGCCTGGGTG	113	False	NA	-14	True	CATAAA	-17	NA	97665793	97642829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97647428_97647531_97647623_97647886_97648036_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ES.12708.2	chr15	-	4074	7	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	31444	8	-17168	-8	3prime_fragment	FALSE	canonical	0	0	junction_4	0.957427107756338	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACTTGCTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	97774747	97752313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604
ES.12708.3	chr15	-	2462	7	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	31299	1765	-17313	1347	3prime_fragment	FALSE	canonical	0	0	junction_4	0.957427107756338	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTGGCCCAGATGGAC	NA	False	NA	NA	False	AATAAA	-41	NA	97774892	97754070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604
ES.12708.4	chr15	-	4213	3	Intergenic	novelGene_10603	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	5346	False	NA	NA	False	NA	NA	NA	97764875	97760258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97762831_97762980_97763971_97764224
ES.12708.5	chr15	-	177	1	Intergenic	novelGene_10604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTTTTTTTAAAA	1769	False	NA	NA	False	NA	NA	NA	97768452	97768275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97768300_97768500
ES.12709.1	chr15	-	700	1	Intergenic	novelGene_10605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATATTGTTTGGTTG	7461	False	NA	NA	False	AATAAA	-34	NA	97861915	97861215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97861200_97861900
ES.1271.1	chr1	-	645	2	FSM	ENSMUSG00000099556.2	ENSMUST00000188068.2	425	2	-7	-213	-7	213	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTTCATAAACCTCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	130669071	130667685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130667976_130668716
ES.12710.1	chr15	+	1647	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	-21	-3	9	3	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTGACTGCCTG	7660	False	NA	14	True	AATAAA	-20	NA	97862089	97868159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.10	chr15	+	4557	2	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	385	0	intron_retention	FALSE	canonical	3	125	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	8421	False	NA	11	True	AATAAA	-17	NA	97862850	97868156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97865209_97865957
ES.12710.2	chr15	+	1420	8	NNC	ENSMUSG00000052369.9	novel	1455	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.234564747603	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7663	False	NA	10	True	AATAAA	-16	NA	97862092	97868155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97862165_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.3	chr15	+	1466	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	-10	-1	-10	0	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7670	False	NA	11	True	AATAAA	-17	NA	97862099	97868156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.4	chr15	+	1781	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	59.5739978890942	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACTGTCTCTGACTGCC	7702	False	NA	12	True	AATAAA	-18	NA	97862131	97868157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97862385_97862720_97862912_97863949_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.5	chr15	+	1649	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5683069266455	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7706	False	NA	10	True	AATAAA	-16	NA	97862135	97868155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97862385_97862668_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.8	chr15	+	2623	7	NIC	ENSMUSG00000052369.9	novel	1455	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	16	junction_1	52.4322313933795	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7717	False	NA	10	True	AATAAA	-16	NA	97862146	97868155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_97862206_97862720_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12710.9	chr15	+	2033	7	NNC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_1	58.1016828977918	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACTGTCTCTGACTGCC	7729	False	NA	12	True	AATAAA	-18	NA	97862158	97868157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_97863033_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ES.12711.1	chr15	+	185	1	Intergenic	novelGene_10606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAGAGAGAGTTC	1019	False	NA	NA	False	NA	NA	NA	97870789	97870974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_97870800_97871000
ES.12712.1	chr15	+	4501	1	Antisense	novelGene_ENSMUSG00000022483.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCATCCTTTGTTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	97891046	97895547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_97891000_97895500
ES.12712.2	chr15	+	1349	2	Antisense	novelGene_ENSMUSG00000022483.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTGTTCTCTCTGATG	NA	False	NA	NA	False	AGTAAA	-19	NA	97891077	97895554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_97891628_97894755
ES.12712.3	chr15	+	3850	2	Antisense	novelGene_ENSMUSG00000022483.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTGTTCTCTCTGATG	NA	False	NA	NA	False	AGTAAA	-19	NA	97891083	97895554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_97894135_97894755
ES.12713.1	chr15	-	5332	54	FSM	ENSMUSG00000022483.18	ENSMUST00000023123.15	5104	54	-228	0	-228	0	multi-exon	TRUE	canonical	0	0	junction_47	3.47415827516495	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGACTTGTGTTTTGT	7827	False	NA	NA	False	ATTAAA	-31	NA	97902804	97873482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97897155_97897173_97898283_97898488_97902289
ES.12713.2	chr15	-	3949	39	NNC	ENSMUSG00000022483.18	novel	4862	53	NA	NA	-2577	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	3.4472679776448	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGGTGACTTGTGTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	97890934	97873485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97890861
ES.12713.5	chr15	-	4410	39	NNC	ENSMUSG00000022483.18	novel	4862	53	NA	NA	-2577	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	3.4472679776448	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATTGGAAAGGATATG	NA	False	NA	NA	False	ATTAAA	-15	NA	97890934	97873498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97890387
ES.12713.7	chr15	-	4681	52	NNC	ENSMUSG00000022483.18	novel	4862	53	NA	NA	-65	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_47	3.53137200465968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-16	NA	97897639	97873515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97897521
ES.12714.1	chr15	-	3369	1	Intergenic	novelGene_10607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCAAGAGTGAGCTTC	NA	False	NA	NA	False	TTTAAA	-15	NA	97934021	97930652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97930700_97934000
ES.12715.1	chr15	+	2792	23	FSM	ENSMUSG00000033065.15	ENSMUST00000163507.8	2816	23	31	-7	-24	3	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTTGTTATTATCTCCC	6313	False	NA	14	True	AATAAA	-26	NA	97990500	98030335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_97990547_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.10	chr15	+	3151	22	NIC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	100	0	intron_retention	FALSE	canonical	0	0	junction_1	25.1280620250306	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1696	False	NA	7	True	AATAAA	-19	NA	98006446	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.11	chr15	+	2977	22	NIC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	106	0	intron_retention	FALSE	canonical	0	0	junction_1	25.135099813416	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1702	False	NA	7	True	AATAAA	-19	NA	98006452	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.12	chr15	+	2829	22	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	3598	-6	3598	0	3prime_fragment	FALSE	canonical	3	50	junction_4	16.7840762456413	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	5194	False	NA	7	True	AATAAA	-19	NA	98009944	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.13	chr15	+	2567	20	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	10926	0	10926	0	3prime_fragment	FALSE	canonical	3	50	junction_2	16.32834830743	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGGGCGCTCTT	NA	False	NA	1	True	AATAAA	-13	NA	98017272	98030322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.14	chr15	+	3141	17	NIC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12389	-1	intron_retention	FALSE	canonical	3	50	junction_1	16.1621423007595	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGCGCTCTTGTTAT	NA	False	NA	6	True	AATAAA	-18	NA	98018735	98030327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.15	chr15	+	2340	19	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12568	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	22.6396898290492	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018914	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.16	chr15	+	6749	8	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12569	0	intron_retention	FALSE	canonical	3	9	junction_1	32.6352757685575	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018915	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98018951_98019077_98020620_98020732_98021803_98022906_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299
ES.12715.17	chr15	+	2462	18	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	12573	-6	12573	0	3prime_fragment	FALSE	canonical	3	75	junction_7	12.0037479729426	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018919	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.18	chr15	+	2530	18	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12574	-2	intron_retention	FALSE	canonical	3	9	junction_1	23.2478744796179	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGCGCTCTTGTTA	NA	False	NA	5	True	AATAAA	-17	NA	98018920	98030326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.19	chr15	+	3016	18	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12582	0	intron_retention	FALSE	canonical	3	9	junction_1	23.1337318687023	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98018928	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.2	chr15	+	2888	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	-3	-6	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1593	False	NA	7	True	AATAAA	-19	NA	98006343	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.20	chr15	+	2254	17	NIC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12614	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	25.5804490773716	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGCGCTCTTGTTA	NA	False	NA	5	True	AATAAA	-17	NA	98018960	98030326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.21	chr15	+	4818	10	NIC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	14560	0	intron_retention	FALSE	canonical	3	93	junction_2	9.32671723174814	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98020906	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.22	chr15	+	1440	9	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	18337	-6	18337	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.41325528178217	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98024683	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.23	chr15	+	1162	6	ISM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	19629	-6	19629	0	3prime_fragment	FALSE	canonical	3	97	junction_2	9.87927122818278	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	NA	False	NA	7	True	AATAAA	-19	NA	98025975	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.3	chr15	+	3997	20	NIC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_1	26.2639489386196	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGCGCTCTTGTTA	1603	False	NA	5	True	AATAAA	-17	NA	98006353	98030326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020620_98020732_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.5	chr15	+	2854	23	NNC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	86	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	22.3296119591885	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTCTTGTTATTATCTCC	1682	False	NA	13	True	AATAAA	-25	NA	98006432	98030334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98006542_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ES.12715.8	chr15	+	7080	14	NIC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	89	0	intron_retention	FALSE	canonical	0	0	junction_1	26.1280415686484	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGCGCTCTTGTTATT	1685	False	NA	7	True	AATAAA	-19	NA	98006435	98030328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98020620_98020732_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98025641_98026059_98026225_98027146
ES.12715.9	chr15	+	1281	12	NNC	ENSMUSG00000033065.15	novel	2879	23	NA	NA	95	3982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.7415636505158	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTGCCTGCAGCGATT	1691	False	NA	NA	False	NA	NA	NA	98006441	98023068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98006491_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906
ES.12716.1	chr15	-	6745	18	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTGGACTCAATACTAT	6433	False	NA	2	True	AATAAA	-36	NA	97991160	97936624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.10	chr15	-	6819	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	-32	-2981	22	-8	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAACTCCCTGGACTC	6429	False	NA	-6	True	AATAAA	-28	NA	97991164	97936632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.13	chr15	-	7377	14	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	10515	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.9043880552631	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACTGGGAACTCCCT	3001	False	NA	-12	True	AATAAA	-22	NA	97974910	97936638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962805_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792
ES.12716.14	chr15	-	6251	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	265	-2634	1	-15	multi-exon	FALSE	canonical	3	13	junction_15	62.0252089332223	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGACTGGGAACTCCC	6408	False	NA	-13	True	AATAAA	-21	NA	97991185	97936639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.15	chr15	-	6453	17	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	4617	-15	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_16	60.3349699075917	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGACTGGGAACTCCC	NA	False	NA	-13	True	AATAAA	-21	NA	97980808	97936639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97980352
ES.12716.16	chr15	-	6007	16	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	10538	-15	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	57.9315304667693	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGACTGGGAACTCCC	3024	False	NA	-13	True	AATAAA	-21	NA	97974887	97936639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792
ES.12716.2	chr15	-	6472	20	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4931	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_19	75.9406387214269	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTGGACTCAATACTAT	8147	False	NA	2	True	AATAAA	-36	NA	97996556	97936624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995844_97996468
ES.12716.21	chr15	-	5965	16	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	10549	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.3797890868022	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTGCTTTGACTGGG	3035	False	NA	-20	True	AATAAA	-14	NA	97974876	97936646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940838_97943211_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792
ES.12716.22	chr15	-	6536	18	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	125	-23	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_14	56.6289446329544	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTGTGCTTTGACTGG	6586	False	NA	-21	True	AATAAA	-13	NA	97991007	97936647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974558_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.23	chr15	-	4054	2	ISM	ENSMUSG00000033075.18	ENSMUST00000180461.2	568	6	3577	-3891	3577	-251	3prime_fragment	FALSE	canonical	3	245	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTAAGTTTATAG	NA	False	NA	NA	False	AGTAAA	-22	NA	97943279	97936875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97940834_97943183
ES.12716.24	chr15	-	3968	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	434	2173	-5	315	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGCACTTTGTAAAATA	6402	False	NA	NA	False	AATACA	-19	NA	97991191	97938797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.25	chr15	-	4264	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	23	4	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGGGCCCTTTCACAGTC	6430	False	NA	0	True	AATAAA	-17	NA	97991163	97939108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.26	chr15	-	4339	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	-28	-505	26	4	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGGGCCCTTTCACAGTC	6433	False	NA	0	True	AATAAA	-17	NA	97991160	97939108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.27	chr15	-	4022	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-29	3	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	6114	False	NA	-1	True	AATAAA	-16	NA	97991479	97939109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.28	chr15	-	3988	17	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	4612	3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_16	60.3349699075917	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	NA	False	NA	-1	True	AATAAA	-16	NA	97980813	97939109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97980352
ES.12716.29	chr15	-	3912	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	178	2485	3	3	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	6146	False	NA	-1	True	AATAAA	-16	NA	97991447	97939109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.3	chr15	-	6487	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCTGGACTCAATACT	6132	False	NA	0	True	AATAAA	-34	NA	97991461	97936626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.30	chr15	-	4143	10	FSM	ENSMUSG00000033075.18	ENSMUST00000181855.8	4886	10	746	-3	746	3	multi-exon	FALSE	canonical	3	87	junction_9	42.5826719525359	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGGCCCTTTCACAGT	2683	False	NA	-1	True	AATAAA	-16	NA	97961372	97939109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830
ES.12716.31	chr15	-	4445	20	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	66.9712387103929	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6456	False	NA	-2	True	AATAAA	-15	NA	97991137	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.32	chr15	-	4301	19	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	68.6757680052514	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6433	False	NA	-2	True	AATAAA	-15	NA	97991160	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97979137_97979180_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.33	chr15	-	4022	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	23	-163	23	2	multi-exon	FALSE	canonical	3	13	junction_15	62.0252089332223	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6166	False	NA	-2	True	AATAAA	-15	NA	97991427	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.34	chr15	-	3979	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4931	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	62.3099827525035	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	8147	False	NA	-2	True	AATAAA	-15	NA	97996556	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995968_97996468
ES.12716.37	chr15	-	4345	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	73.5913810036521	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	6480	False	NA	-2	True	AATAAA	-15	NA	97991113	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954844_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.38	chr15	-	4140	9	ISM	ENSMUSG00000033075.18	ENSMUST00000181855.8	4886	10	2743	-2	2743	2	3prime_fragment	FALSE	canonical	3	180	junction_8	23.5474919046594	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCGGGCCCTTTCACAG	4680	False	NA	-2	True	AATAAA	-15	NA	97959375	97939110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796
ES.12716.39	chr15	-	4375	19	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	63.9405588162036	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCGGGCCCTTTCACA	6433	False	NA	-3	True	AATAAA	-14	NA	97991160	97939111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974391_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.40	chr15	-	4043	19	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	109	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	59.4623026134943	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCGGGCCCTTTCACA	6570	False	NA	-3	True	AATAAA	-14	NA	97991023	97939111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990684
ES.12716.41	chr15	-	3825	19	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-4965	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	59.1401348963253	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	8113	False	NA	-4	True	AATAAA	-13	NA	97996590	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97996468
ES.12716.42	chr15	-	5262	5	ISM	ENSMUSG00000033075.18	ENSMUST00000180461.2	568	6	-2490	-1654	-2490	0	intron_retention	FALSE	canonical	3	184	junction_2	23.4454153300811	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	NA	False	NA	-4	True	AATAAA	-13	NA	97949346	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066
ES.12716.43	chr15	-	3711	18	NNC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	-4929	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	51.2685446235805	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	8149	False	NA	-4	True	AATAAA	-13	NA	97996554	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97996468
ES.12716.44	chr15	-	3924	20	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-4929	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_19	66.0454808459005	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	8149	False	NA	-4	True	AATAAA	-13	NA	97996554	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995839_97996468
ES.12716.45	chr15	-	3608	18	NNC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_14	55.4944431271554	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6414	False	NA	-4	True	AATAAA	-13	NA	97991179	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974558_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.46	chr15	-	3890	20	NIC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	66.2526014750822	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6374	False	NA	-4	True	AATAAA	-13	NA	97991219	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.47	chr15	-	4242	18	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	57.871531747926	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6433	False	NA	-4	True	AATAAA	-13	NA	97991160	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974576_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.48	chr15	-	5641	17	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	84	junction_16	36.7703493830287	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6399	False	NA	-4	True	AATAAA	-13	NA	97991194	97939112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97985015_97991163
ES.12716.49	chr15	-	3730	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	208	2637	33	12	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCAGCCTGTGCCCCTCTT	6176	False	NA	NA	False	AATGAA	-18	NA	97991417	97939261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.5	chr15	-	6364	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4961	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	61.1035601395565	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCTGGACTCAATACT	8117	False	NA	0	True	AATAAA	-34	NA	97996586	97936626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995839_97996468
ES.12716.50	chr15	-	3833	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	3	7	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCAGCAGCCTGTGCCC	6146	False	NA	NA	False	AATGAA	-13	NA	97991447	97939266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.51	chr15	-	3537	18	NNC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	-4930	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	66.3040600091912	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGTCTCCACTCCAG	8148	False	NA	NA	False	AATGAA	-1	NA	97996555	97939278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982973_97984966_97985015_97996468
ES.12716.52	chr15	-	4153	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	-29	-318	25	-22	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTGTTAAATGAATGT	6432	False	NA	NA	False	AAAACA	-20	NA	97991161	97939295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.53	chr15	-	4062	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-18	-24	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCATTGTTAAATGAAT	6443	False	NA	NA	False	AAAACA	-18	NA	97991150	97939297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.54	chr15	-	3765	20	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-4958	-27	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_19	66.0454808459005	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTCCATTGTTAAATG	8120	False	NA	NA	False	AAAACA	-15	NA	97996583	97939300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995839_97996468
ES.12716.56	chr15	-	3433	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	398	2744	24	-95	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGTTTAGTACATTTT	6366	False	NA	NA	False	NA	NA	NA	97991227	97939368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.57	chr15	-	3698	19	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	35	-96	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTGTTTAGTACATTT	6178	False	NA	NA	False	NA	NA	NA	97991415	97939369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.58	chr15	-	3671	18	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-179	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.2886215506147	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGCCGGTAGTTTTC	6646	False	NA	NA	False	NA	NA	NA	97990947	97939483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980207_97982850_97982982_97984966_97985015_97990528
ES.12716.59	chr15	-	3412	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	302	2861	-72	128	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGTGGCCGGTAGTTT	6270	False	NA	NA	False	NA	NA	NA	97991323	97939485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.6	chr15	-	6419	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	153	3	-22	-3	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCCTGGACTCAATAC	6121	False	NA	-1	True	AATAAA	-33	NA	97991472	97936627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.60	chr15	-	5632	14	ISM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	14214	214	8189	126	intron_retention	FALSE	canonical	3	146	junction_9	27.3400674823752	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGTGGCCGGTAGT	675	False	NA	NA	False	NA	NA	NA	97977236	97939487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430
ES.12716.61	chr15	-	3670	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-6	-64	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATGCTGTCAGCTGA	6455	False	NA	NA	False	AGTAAA	-12	NA	97991138	97939677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.62	chr15	-	3540	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	-18	-206	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTGTAGGTTTATT	6443	False	NA	NA	False	AAAAAG	-17	NA	97991150	97939819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.63	chr15	-	3169	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	208	3198	33	-209	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTAGTCTGTAGGTTT	6176	False	NA	NA	False	AAAAAG	-14	NA	97991417	97939822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.64	chr15	-	3104	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	229	549	30	-209	multi-exon	FALSE	canonical	3	13	junction_15	62.0252089332223	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTAGTCTGTAGGTTT	6372	False	NA	NA	False	AAAAAG	-14	NA	97991221	97939822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.66	chr15	-	2681	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	142	248	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCGTCTTCTTTTCC	6603	False	NA	NA	False	NA	NA	NA	97990990	97940518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.67	chr15	-	2625	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4975	247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	89.8520216938335	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCCGTCTTCTTTTC	8103	False	NA	NA	False	NA	NA	NA	97996600	97940519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957788_97957836_97962699_97962755_97964284_97964557_97964636_97964739_97973684_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995968_97996468
ES.12716.68	chr15	-	2418	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4908	247	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	61.1035601395565	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCCGTCTTCTTTTC	8170	False	NA	NA	False	NA	NA	NA	97996533	97940519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995839_97996468
ES.12716.69	chr15	-	2074	16	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	10591	247	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	57.9315304667693	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCCGTCTTCTTTTC	3077	False	NA	NA	False	NA	NA	NA	97974834	97940519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792
ES.12716.70	chr15	-	2470	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	210	3895	35	247	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCCGTCTTCTTTTC	6178	False	NA	NA	False	NA	NA	NA	97991415	97940519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.71	chr15	-	2181	17	NNC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	4607	247	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	61.1697177940196	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCCGTCTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	97980818	97940519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97980754
ES.12716.72	chr15	-	2274	15	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	-3	-2543	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.6741816109236	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATATTTTGTTGTTGTT	6339	False	NA	NA	False	GATAAA	-11	NA	97991254	97943309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.73	chr15	-	1618	2	Intergenic	novelGene_10608	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAGAAAGAAAGAA	9705	False	NA	NA	False	AGTAAA	-37	NA	97954350	97952669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_97953139_97953201
ES.12716.74	chr15	-	5093	1	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	3033	6992	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTTGATTTGAGAAGG	4970	False	NA	NA	False	NA	NA	NA	97959085	97953992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97954000_97959100
ES.12716.75	chr15	-	2269	12	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	27	6962	intron_retention	FALSE	canonical	3	84	junction_11	35.8071048861895	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6369	False	NA	NA	False	NA	NA	NA	97991224	97954022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ES.12716.76	chr15	-	4248	10	ISM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	14052	14591	8345	6780	internal_fragment	FALSE	canonical	3	74	junction_5	46.7618077780005	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATTGATCTATCCTC	831	False	NA	NA	False	ATTAAA	-21	NA	97977080	97954204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430
ES.12716.77	chr15	-	1961	4	ISM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	142	39275	142	4034	5prime_fragment	FALSE	canonical	3	73	junction_3	61.7647868035573	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATCCAATCATTAAT	6603	False	NA	NA	False	ATTAAA	-26	NA	97990990	97978888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.78	chr15	-	1365	4	ISM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	1	40012	1	3297	5prime_fragment	FALSE	canonical	3	73	junction_3	61.7647868035573	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAAGTCTATTTCTCCT	6462	False	NA	NA	False	ATTAAA	-17	NA	97991131	97979625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_97980209_97982850_97982982_97984966_97985015_97990528
ES.12716.79	chr15	-	5373	1	NIC	ENSMUSG00000033075.18	novel	6575	18	NA	NA	29	588	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGTCTTGGTGTCTGT	6371	False	NA	NA	False	NA	NA	NA	97991222	97985849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_97985800_97991200
ES.12716.80	chr15	-	2448	2	FSM	ENSMUSG00000033075.18	ENSMUST00000182611.2	853	2	-373	-1222	-9	588	multi-exon	FALSE	canonical	3	12	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGTCTTGGTGTCTGT	6452	False	NA	NA	False	NA	NA	NA	97991141	97985849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_97987685_97990528
ES.12717.1	chr15	-	1743	2	Antisense	novelGene_ENSMUSG00000033065.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGATAATCAAGAATC	NA	False	NA	NA	False	NA	NA	NA	98017366	98014488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98016135_98017269
ES.12717.2	chr15	-	2881	1	Antisense	novelGene_ENSMUSG00000033065.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGATAATCAAGAATC	NA	False	NA	NA	False	NA	NA	NA	98017369	98014488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98014500_98017400
ES.12718.1	chr15	-	7011	3	NIC	ENSMUSG00000048175.14	novel	1049	4	NA	NA	7	0	intron_retention	FALSE	canonical	3	32	junction_2	35.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043580	98032517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98039270_98040531_98040692_98043481
ES.12718.2	chr15	-	4863	3	ISM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	53	-1077	53	0	intron_retention	FALSE	canonical	3	103	junction_2	11	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043487	98032517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98034320_98039164_98039270_98040531
ES.12718.4	chr15	-	2155	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	11	-1066	11	-11	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGCAAATTTGGCCAC	NA	False	NA	-11	True	AATAAA	-10	NA	98043576	98032528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
ES.12718.5	chr15	-	2038	4	NNC	ENSMUSG00000048175.14	novel	1100	4	NA	NA	-6	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.485472069779	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAAATAAATAA	NA	False	NA	-33	True	NA	NA	NA	98043546	98032550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98034320_98039164_98039270_98040531_98040631_98043481
ES.12718.6	chr15	-	177	1	Intergenic	novelGene_10609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	98041676	98041499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98041500_98041700
ES.12719.1	chr15	+	4299	1	Antisense	novelGene_ENSMUSG00000065939.3_AS_novelGene_ENSMUSG00000022992.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTTTTTAAACAATT	NA	False	NA	NA	False	AAAAAG	-32	NA	98422650	98426949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98422600_98426900
ES.1272.1	chr1	+	187	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	130897575	130897762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_130897600_130897800
ES.12720.1	chr15	+	1100	1	Intergenic	novelGene_10611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATGACTAATCTAAT	4859	False	NA	NA	False	NA	NA	NA	98461246	98462346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98461200_98462300
ES.12721.1	chr15	-	3607	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	-11	0	-11	0	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGACGGAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	98432156	98415538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.100	chr15	-	3902	1	Genic_Genomic	ENSMUSG00000011960.13	novel	NA	NA	NA	NA	1212	782	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	98439689	98435787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_98435800_98439700
ES.12721.101	chr15	-	3913	2	NNC	ENSMUSG00000011960.13	novel	683	2	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTGTATGTTCCG	NA	False	NA	NA	False	AATAAA	-21	NA	98440869	98436570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98440250_98440635
ES.12721.102	chr15	-	6388	10	NNC	ENSMUSG00000011960.13	novel	7397	10	NA	NA	-12	3	intron_retention	FALSE	canonical	1	1	junction_1	15.0415063600773	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGATCCTTGTTTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	98465529	98436576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98440322_98440635_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.103	chr15	-	6738	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-52	-4511	-8	-1	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTGATCCTTGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	98465569	98436580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.104	chr15	-	2376	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-155	-46	-111	46	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	98465672	98441045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.106	chr15	-	2424	10	NNC	ENSMUSG00000011960.13	novel	7397	10	NA	NA	-41	21	intron_retention	FALSE	canonical	1	2	junction_5	16.1390562240321	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGCAAAAACTTCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	98465602	98441070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98451015_98451159_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.107	chr15	-	2143	8	FSM	ENSMUSG00000011960.13	ENSMUST00000168928.8	2011	8	-133	1	-89	-1	multi-exon	FALSE	canonical	3	5	junction_2	14.8681278071516	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465650	98441092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98442490_98444404_98444476_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.108	chr15	-	3531	5	ISM	ENSMUSG00000011960.13	ENSMUST00000164565.8	465	6	-163	299	-28	-299	5prime_fragment	FALSE	canonical	3	43	junction_3	1.87082869338697	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGACCATCTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	98465589	98446831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.109	chr15	-	2898	2	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	4337	-313	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGAAATGAGTA	NA	False	NA	NA	False	NA	NA	NA	98458683	98446845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98447868_98456807
ES.12721.11	chr15	-	4268	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	217	junction_1	320.937664313493	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACTTGGACGGAATCA	NA	False	NA	NA	False	NA	NA	NA	98432153	98415542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.110	chr15	-	1016	6	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-17	-2485	intron_retention	FALSE	canonical	3	14	junction_1	12.5123938556936	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGTTTGAATTTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	98465534	98449017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98449521_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.111	chr15	-	784	4	NNC	ENSMUSG00000011960.13	novel	2015	3	NA	NA	-89	-1216	intron_retention	FALSE	canonical	3	4	junction_1	18.8738502225228	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGGCTGTTTTTCCA	NA	False	NA	NA	False	ATTAAA	-15	NA	98465650	98457694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98457974_98458077_98458207_98462927_98463010_98465356
ES.12721.112	chr15	-	158	1	Intergenic	novelGene_10610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	98458682	98458524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98458500_98458700
ES.12721.113	chr15	-	1500	1	NIC	ENSMUSG00000011960.13	novel	7397	10	NA	NA	-29	-7612	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAAAGGAAGGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	98465590	98464090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98464100_98465600
ES.12721.12	chr15	-	3377	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	395.612954003026	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACTTGGACGGAATCA	NA	False	NA	NA	False	NA	NA	NA	98432147	98415542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.13	chr15	-	2382	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	-55	-3	-35	3	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGATCGATTGTGTTCT	NA	False	NA	-6	True	ATTAAA	-29	NA	98432180	98416685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.14	chr15	-	2484	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	-35	1147	-35	3	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGATCGATTGTGTTCT	NA	False	NA	-6	True	ATTAAA	-29	NA	98432180	98416685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.15	chr15	-	1750	9	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	474	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	379.978926224863	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGATCGATTGTGTTCT	NA	False	NA	-6	True	ATTAAA	-29	NA	98431651	98416685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417099_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398
ES.12721.16	chr15	-	2501	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	415.584516073446	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGATCGATTGTGTTCT	NA	False	NA	-6	True	ATTAAA	-29	NA	98432142	98416685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98427797_98427853_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.17	chr15	-	3861	8	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	310	0	intron_retention	FALSE	non_canonical	0	0	junction_4	426.093359512218	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	-9	True	ATTAAA	-26	NA	98431815	98416688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422339_98424553_98426743_98426911_98427172_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.18	chr15	-	3213	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	385	junction_4	242.205459011559	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	-9	True	ATTAAA	-26	NA	98432142	98416688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.19	chr15	-	7116	1	FSM	ENSMUSG00002076288.1	ENSMUST00020182350.1	138	1	-6070	-908	-6070	908	mono-exon	FALSE	NA	NA	NA	NA	NA	882	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	-9	True	ATTAAA	-26	NA	98423804	98416688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98416700_98423800
ES.12721.2	chr15	-	7269	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	425.669958512751	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGACGGAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	98432178	98415538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.20	chr15	-	3208	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	1	junction_2	434.791421542461	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATCTGGATCGATTGT	NA	False	NA	-11	True	ATTAAA	-24	NA	98432153	98416690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98420505_98420594_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.21	chr15	-	2338	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432155	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.22	chr15	-	2090	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	363.061978180035	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432143	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.23	chr15	-	2149	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-45	-3	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432190	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.25	chr15	-	2214	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	376.428197004422	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432126	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.27	chr15	-	6408	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	357.49253639796	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432131	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.29	chr15	-	2396	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	463.078933623019	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432125	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98420505_98420594_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.3	chr15	-	3485	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	-12	-1149	8	-1	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGACGGAATCATGT	NA	False	NA	NA	False	NA	NA	NA	98432137	98415539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.30	chr15	-	2366	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	383.349790306966	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432171	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426917_98427177_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.31	chr15	-	4287	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	385	junction_4	232.454800714031	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432127	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.33	chr15	-	4363	8	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-28	-3	intron_retention	FALSE	canonical	1	217	junction_2	343.121564701587	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATCTGGATCGATTG	NA	False	NA	-12	True	ATTAAA	-23	NA	98432173	98416691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98429319_98429600_98429780_98431398
ES.12721.35	chr15	-	2487	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	399.718463421444	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432165	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.37	chr15	-	2498	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	447.733190639247	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432150	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426835_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.38	chr15	-	3755	17	Fusion	ENSMUSG00000022992.18_ENSMUSG00000011960.13	novel	3596	10	NA	NA	-63	-4	intron_retention	FALSE	canonical	0	0	junction_9	463.194141262603	984	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98465624	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98432450_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ES.12721.39	chr15	-	4310	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	-4	intron_retention	FALSE	canonical	1	385	junction_5	242.579078601185	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432144	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.4	chr15	-	3226	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	363.061978180035	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTGGACGGAATCATG	NA	False	NA	NA	False	NA	NA	NA	98432128	98415540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.40	chr15	-	5265	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	80	junction_2	337.333662713937	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432145	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.41	chr15	-	3092	9	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	403.189394081739	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432126	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427169_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.44	chr15	-	2328	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	448.278931023978	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGATCTGGATCGATT	NA	False	NA	-13	True	ATTAAA	-22	NA	98432121	98416692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.45	chr15	-	2560	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	398.463749919613	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTGATCTGGATCGAT	NA	False	NA	-14	True	ATTAAA	-21	NA	98432137	98416693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.46	chr15	-	3330	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	451.023718956917	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTGATCTGGATCGAT	NA	False	NA	-14	True	ATTAAA	-21	NA	98432144	98416693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98419516_98419644_98422339_98422587_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.47	chr15	-	4284	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	355.448074032387	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTGATCTGGATCGA	NA	False	NA	-15	True	ATTAAA	-20	NA	98432155	98416694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98420505_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.48	chr15	-	2898	9	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-33	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	410.752643783336	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTGATCTGGATCGA	NA	False	NA	-15	True	ATTAAA	-20	NA	98432178	98416694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98422339_98422594_98424455_98424547_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.49	chr15	-	4054	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	448.609674438704	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTGATCTGGATCGA	NA	False	NA	-15	True	ATTAAA	-20	NA	98432137	98416694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98420505_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.5	chr15	-	3618	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	399.718463421444	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTGGACGGAATCATG	NA	False	NA	NA	False	NA	NA	NA	98432144	98415540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.50	chr15	-	4447	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-14	5	intron_retention	FALSE	canonical	1	385	junction_5	259.327544835106	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAAGTGATCTGGATCG	NA	False	NA	-16	True	ATTAAA	-19	NA	98432159	98416695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98429319_98429600_98429780_98431398
ES.12721.51	chr15	-	5977	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	5	intron_retention	FALSE	non_canonical	0	0	junction_2	422.296104646965	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAAGTGATCTGGATCG	NA	False	NA	-16	True	ATTAAA	-19	NA	98432144	98416695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98419516_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.52	chr15	-	3335	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	5	intron_retention	FALSE	canonical	1	41	junction_2	414.575939818682	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAAGTGATCTGGATCG	NA	False	NA	-16	True	ATTAAA	-19	NA	98432144	98416695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.54	chr15	-	2245	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	395.612954003026	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98432170	98416697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.55	chr15	-	3961	8	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	220	1159	200	3	intron_retention	FALSE	canonical	1	385	junction_5	254.40093697684	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAAGTGATCTGGAT	NA	False	NA	-18	True	ATTAAA	-17	NA	98431925	98416697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600
ES.12721.56	chr15	-	2026	10	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-31	2	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	387.907205398405	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAAAGTGATCTGGA	NA	False	NA	-19	True	ATTAAA	-16	NA	98432176	98416698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.58	chr15	-	2310	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	198	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	355.316586360966	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAAAGTGATCTGGA	NA	False	NA	-19	True	ATTAAA	-16	NA	98431927	98416698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429411_98429600_98429780_98431398_98431658_98431782
ES.12721.59	chr15	-	5144	9	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	80	junction_2	419.401061038238	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAAAGTGATCTGGA	NA	False	NA	-19	True	ATTAAA	-16	NA	98432145	98416698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.6	chr15	-	3605	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	447.246748809857	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTGGACGGAATCATG	NA	False	NA	NA	False	NA	NA	NA	98432144	98415540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.60	chr15	-	2548	12	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	442.482889429655	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAAAGTGATCTGGA	NA	False	NA	-19	True	ATTAAA	-16	NA	98432144	98416698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98420505_98420594_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.63	chr15	-	5900	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-5	0	intron_retention	FALSE	canonical	1	385	junction_4	240.522475507986	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432130	98416700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422339_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98431658_98431782
ES.12721.64	chr15	-	4856	7	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-10	0	intron_retention	FALSE	canonical	1	217	junction_1	359.81044392229	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432155	98416700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600
ES.12721.65	chr15	-	4505	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	217	junction_2	301.447523418256	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432127	98416700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.66	chr15	-	3088	8	NIC	ENSMUSG00000022992.18	novel	1980	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	91	junction_5	369.055883163999	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432144	98416700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
ES.12721.67	chr15	-	2499	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	356.531473166149	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432126	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429404_98429600_98429780_98431398_98431658_98431782
ES.12721.68	chr15	-	2329	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_9	397.846548989946	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432159	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431642_98431782
ES.12721.69	chr15	-	2400	9	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	449.495272500168	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432128	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429411_98429600_98429780_98431398_98431658_98431782
ES.12721.70	chr15	-	2371	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	344.755797630729	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432174	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782_98432031_98432121
ES.12721.71	chr15	-	2002	9	FSM	ENSMUSG00000022992.18	ENSMUST00000231066.2	1980	9	-23	1	-23	0	multi-exon	FALSE	canonical	1	77	junction_8	414.912038870891	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432168	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98432121
ES.12721.73	chr15	-	4329	12	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	478.432443826487	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432133	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98420505_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427169_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.74	chr15	-	7219	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	385	junction_3	235.127147539803	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432128	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.76	chr15	-	2257	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	442.932963325151	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432181	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.77	chr15	-	2458	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	441.373096144294	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432141	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98428916_98429048_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.78	chr15	-	2146	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	403.839386390184	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432124	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.80	chr15	-	5201	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	405.912170302887	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432144	98416701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.81	chr15	-	2309	10	NNC	ENSMUSG00000022992.18	novel	2311	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	383.349790306966	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432126	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426904_98427165_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.84	chr15	-	2743	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	34	junction_3	401.066079343542	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432171	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.87	chr15	-	2395	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	405.912170302887	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432155	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422513_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.88	chr15	-	2267	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	450.111783098322	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432142	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98427797_98427853_98429600_98429780_98431398_98431658_98431782
ES.12721.89	chr15	-	3247	10	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-20	-1	intron_retention	FALSE	canonical	1	34	junction_2	415.875901480356	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432165	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.90	chr15	-	2151	11	NNC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	443.934499673094	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432178	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.91	chr15	-	1910	9	NIC	ENSMUSG00000022992.18	novel	1980	9	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	1	77	junction_8	441.760115900021	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432179	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98432121
ES.12721.92	chr15	-	6877	9	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-35	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	444.473969288416	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432180	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.93	chr15	-	5685	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	436.43355383561	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432144	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98418711_98420205_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.94	chr15	-	4908	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	448.907072789013	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432191	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98418307_98419516_98421674_98421727_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
ES.12721.95	chr15	-	4204	9	NIC	ENSMUSG00000022992.18	novel	2324	10	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	217	junction_2	310.922392849084	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAAGTGTAAAGTGATC	NA	False	NA	-23	True	ATTAAA	-12	NA	98432157	98416702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98417429_98418198_98418307_98422441_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.96	chr15	-	6405	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	5	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	357.49253639796	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATCAAAGTGTAAAGTGAT	NA	False	NA	-24	True	ATTAAA	-11	NA	98432140	98416703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98417429_98418198_98421661_98421714_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ES.12721.98	chr15	-	1436	5	ISM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	2430	6969	-2361	614	internal_fragment	FALSE	canonical	1	385	junction_2	291.118532560193	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTTGTCTTTAATGT	NA	False	NA	NA	False	TTTAAA	-23	NA	98429695	98423657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600
ES.12721.99	chr15	-	1556	1	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	516	-5782	mono-exon	FALSE	NA	NA	NA	NA	NA	833	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTGCTAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	98431609	98430053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98430100_98431600
ES.12722.1	chr15	+	1661	1	Genic_Genomic	ENSMUSG00000091050.2	novel	NA	NA	NA	NA	648	49	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCACTGTCTCTTTTTTC	9465	False	NA	NA	False	TATAAA	-25	NA	98465852	98467513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_98465900_98467500
ES.12723.1	chr15	-	179	1	Antisense	novelGene_ENSMUSG00000091050.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGCCCCTTTACCC	NA	False	NA	NA	False	NA	NA	NA	98466417	98466238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98466200_98466400
ES.12724.1	chr15	-	157	1	Intergenic	novelGene_10612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAATGAAACCTTTT	9067	False	NA	NA	False	NA	NA	NA	98473713	98473556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98473600_98473700
ES.12725.1	chr15	-	176	1	Intergenic	novelGene_10613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTTCCCTTTAAA	4983	False	NA	NA	False	NA	NA	NA	98477797	98477621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98477600_98477800
ES.12726.1	chr15	+	175	1	Intergenic	novelGene_10614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAGAA	79	False	NA	NA	False	NA	NA	NA	98481607	98481782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98481600_98481800
ES.12727.1	chr15	-	4460	16	NNC	ENSMUSG00000022994.10	novel	6038	22	NA	NA	-2027	0	intron_retention	FALSE	canonical	0	0	junction_2	1.02415276638248	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTCTCTGCAGCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	98496884	98487853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494432_98494557_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738
ES.12727.2	chr15	-	6010	22	NNC	ENSMUSG00000022994.10	novel	6038	22	NA	NA	700	0	intron_retention	TRUE	canonical	0	0	junction_2	1.04978131833565	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTCTCTGCAGCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	98507213	98487853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494397_98494557_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754_98502617_98507085
ES.12727.3	chr15	-	2888	4	NIC	ENSMUSG00000022994.10	novel	6038	22	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_2	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTCTCTGCAGCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	98492140	98487853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98490357_98490553_98490679_98491341_98491547_98492085
ES.12728.1	chr15	+	2470	12	NNC	ENSMUSG00000003352.15	novel	2714	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.0568432118369	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98529683	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98529795_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.10	chr15	+	7692	10	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-24	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	16.535782375365	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTCCGGTGTCTCT	20	False	NA	-1	True	AATAAA	-10	NA	98532623	98542404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98536042_98536254_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539057_98539139_98539280_98539340_98539496_98539972_98540189_98540286_98540382
ES.12728.11	chr15	+	2810	12	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.5121919525757	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	40	False	NA	5	True	AATAAA	-16	NA	98532643	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.12	chr15	+	2741	11	NNC	ENSMUSG00000003352.15	novel	2734	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.783831782544	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	59	False	NA	5	True	AATAAA	-16	NA	98532662	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539148_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.13	chr15	+	3573	9	NIC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	15	-3	intron_retention	FALSE	canonical	3	16	junction_1	10.5999705188269	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTCCGGTGTCTCTGGT	59	False	NA	2	True	AATAAA	-13	NA	98532662	98542407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98539139_98539280_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.14	chr15	+	3145	10	NIC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	22	2	intron_retention	FALSE	canonical	3	8	junction_5	14.4307627511593	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTGTCTCTGGTCTGTC	66	False	NA	7	True	AATAAA	-18	NA	98532669	98542412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539057_98539139_98539280_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.15	chr15	+	2860	13	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.8079845785752	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	90	False	NA	5	True	AATAAA	-16	NA	98532693	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98533174_98533274_98537368_98537492_98537694_98537818_98538222_98538336_98538566_98538632_98539042_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.16	chr15	+	2852	12	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.0568432118369	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	123	False	NA	5	True	AATAAA	-16	NA	98532726	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533220_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.18	chr15	+	2659	12	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-117	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.0028271058948	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	265	False	NA	3	True	AATAAA	-14	NA	98532868	98542408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539420_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.19	chr15	+	2629	13	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.3735214489605	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	266	False	NA	5	True	AATAAA	-16	NA	98532869	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98533174_98533220_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.2	chr15	+	5343	13	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-38	0	intron_retention	TRUE	non_canonical	0	0	junction_6	19.2287039489289	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530218	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.20	chr15	+	3001	12	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	106	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.0568432118369	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTCCGGTGTCTCTGG	488	False	NA	1	True	AATAAA	-12	NA	98533091	98542406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98533738_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.21	chr15	+	5513	8	NIC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	1943	0	intron_retention	FALSE	canonical	3	37	junction_6	5.62429133857986	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	410	False	NA	5	True	AATAAA	-16	NA	98534928	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98537492_98537694_98537818_98538219_98538336_98538566_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.22	chr15	+	5212	9	NNC	ENSMUSG00000003352.15	novel	2714	9	NA	NA	2070	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	20.2546291005291	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	537	False	NA	3	True	AATAAA	-14	NA	98535055	98542408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98536047_98536261_98537492_98537694_98537818_98538219_98538336_98538566_98539139_98539280_98539972_98540189_98540258_98540382_98540533_98541137
ES.12728.23	chr15	+	4959	9	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	2153	0	intron_retention	FALSE	non_canonical	0	0	junction_4	15.5196448090799	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	620	False	NA	5	True	AATAAA	-16	NA	98535138	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.24	chr15	+	2774	11	NIC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-199	0	intron_retention	FALSE	canonical	3	37	junction_6	5.71051661410769	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	2652	False	NA	5	True	AATAAA	-16	NA	98537170	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98537492_98537694_98537818_98538219_98538336_98538566_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.25	chr15	+	3426	4	NIC	ENSMUSG00000003352.15	novel	2714	9	NA	NA	374	0	intron_retention	FALSE	canonical	2	4	junction_2	22.4251842554055	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	3225	False	NA	5	True	AATAAA	-16	NA	98537743	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98537818_98538219_98538336_98538569_98540533_98541137
ES.12728.26	chr15	+	1946	1	Genic_Genomic	ENSMUSG00000003352.15	novel	NA	NA	NA	NA	3813	718	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6664	False	NA	NA	False	NA	NA	NA	98541182	98543128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_98541200_98543100
ES.12728.3	chr15	+	4396	4	NIC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	18	junction_1	14.9740516301441	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	NA	False	NA	3	True	AATAAA	-14	NA	98530237	98542408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98530402_98537368_98537492_98537694_98540533_98541137
ES.12728.4	chr15	+	3680	14	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	21.395127466083	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530251	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98530402_98532028_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538569_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.5	chr15	+	3523	8	NIC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	18	junction_1	10.6022716087311	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCGGTGTCTCTGGTC	NA	False	NA	3	True	AATAAA	-14	NA	98530251	98542408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98539139_98539280_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.6	chr15	+	2655	11	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	16.0012499511757	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530262	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.7	chr15	+	3501	15	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.428214282738	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTCCGGTGTCTCTGG	NA	False	NA	1	True	AATAAA	-12	NA	98530265	98542406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98530402_98532028_98532133_98532296_98533095_98533174_98533283_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.8	chr15	+	2475	12	NNC	ENSMUSG00000003352.15	novel	2513	13	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.2619009246788	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530285	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539046_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12728.9	chr15	+	2690	13	NNC	ENSMUSG00000003352.15	novel	2477	13	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.0218405454744	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	11	False	NA	5	True	AATAAA	-16	NA	98532614	98542410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98532700_98532837_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ES.12729.1	chr15	+	174	2	Antisense	novelGene_ENSMUSG00000116482.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGGAGCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	98558059	98604984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98558205_98604955
ES.12729.2	chr15	+	176	1	Intergenic	novelGene_10616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	98558059	98558235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98558100_98558200
ES.12729.3	chr15	+	178	1	Intergenic	novelGene_10617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	98563165	98563343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98563200_98563300
ES.12729.4	chr15	+	512	1	Antisense	novelGene_ENSMUSG00000054855.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	554	False	NA	NA	False	NA	NA	NA	98568583	98569095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98568600_98569100
ES.12729.5	chr15	+	175	1	Intergenic	novelGene_10618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAGCCCCCA	1340	False	NA	NA	False	NA	NA	NA	98569369	98569544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98569400_98569500
ES.12729.6	chr15	+	174	1	Intergenic	novelGene_10619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAAACAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	98582666	98582840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98582700_98582800
ES.12729.7	chr15	+	171	1	Intergenic	novelGene_10621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	98596853	98597024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98596900_98597000
ES.12729.8	chr15	+	158	1	Intergenic	novelGene_10622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGAGCTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	98604827	98604985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98604800_98605000
ES.1273.1	chr1	+	1336	5	FSM	ENSMUSG00000016529.6	ENSMUST00000016673.6	1310	5	-30	4	-30	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTGGTGTCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	130947551	130952707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_130947814_130948700_130948761_130949065_130949219_130950225_130950292_130951912
ES.12730.1	chr15	-	3209	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	-15	-7	-10	7	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGAGCTCCATTCTCC	6984	False	NA	-7	True	AATAAA	-22	NA	98560785	98543007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ES.12730.2	chr15	-	3320	18	NNC	ENSMUSG00000003360.16	novel	3187	17	NA	NA	-9	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	10.5633694949341	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGAGCTCCATTCTCC	6985	False	NA	-7	True	AATAAA	-22	NA	98560784	98543007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98557363_98557476_98560703
ES.12730.3	chr15	-	3198	17	NNC	ENSMUSG00000003360.16	novel	3187	17	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	8.63767185067828	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	6984	False	NA	-11	True	AATAAA	-18	NA	98560785	98543011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549231_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ES.12730.4	chr15	-	3679	14	NIC	ENSMUSG00000003360.16	novel	3187	17	NA	NA	4470	3	intron_retention	FALSE	canonical	3	15	junction_5	5.61801834969545	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	8171	False	NA	-11	True	AATAAA	-18	NA	98556269	98543011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98549238_98549345_98549480_98549798_98550420_98550768_98550863_98554482_98554594_98556110
ES.12730.5	chr15	-	3143	18	NNC	ENSMUSG00000003360.16	novel	3187	17	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	8.52352738196704	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCCCGAGCTCCATT	6982	False	NA	-11	True	AATAAA	-18	NA	98560787	98543011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549376_98549439_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ES.12730.6	chr15	-	3613	16	NIC	ENSMUSG00000003360.16	novel	3187	17	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	15	junction_5	5.25948877955094	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTCAGCCCCGAG	6985	False	NA	-18	True	AATAAA	-11	NA	98560784	98543018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ES.12730.7	chr15	-	3640	9	NIC	ENSMUSG00000003360.16	novel	3093	11	NA	NA	-2	0	intron_retention	FALSE	canonical	2	2	junction_8	10.7405481703682	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGTGCACG	6992	False	NA	NA	False	NA	NA	NA	98560777	98545871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98546611_98547595_98547774_98548024_98548700_98548793_98549238_98549345_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560658
ES.12730.8	chr15	-	3261	2	Genic_Genomic	ENSMUSG00000003360.16	novel	3187	17	NA	NA	-9	-1545	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAGAAAAAAAA	6985	False	NA	NA	False	NA	NA	NA	98560784	98557318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_98558062_98558266
ES.12730.9	chr15	-	173	1	Intergenic	novelGene_10615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACAGT	9858	False	NA	NA	False	NA	NA	NA	98557911	98557738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98557700_98557900
ES.12731.1	chr15	-	1218	5	FSM	ENSMUSG00000054855.14	ENSMUST00000109149.9	1034	5	4	-188	2	188	multi-exon	FALSE	canonical	0	0	junction_1	18.1176709319934	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	98575337	98561113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98561772_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ES.12731.2	chr15	-	1678	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	-42	567	-42	-567	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTTTTGTTGTTGTTG	NA	False	NA	NA	False	AATATA	-17	NA	98575384	98567652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ES.12732.1	chr15	-	183	1	Intergenic	novelGene_10620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCAATTTTATA	8152	False	NA	NA	False	NA	NA	NA	98596518	98596335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98596300_98596500
ES.12733.1	chr15	+	1870	8	FSM	ENSMUSG00000003354.7	ENSMUST00000003444.6	1900	8	-5	35	-5	-35	multi-exon	FALSE	canonical	0	0	junction_1	1.12485826771597	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGAGATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	98606082	98621182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98606418_98606935_98607104_98615304_98615475_98616592_98616732_98618464_98618663_98618838_98619058_98620398_98620552_98620694
ES.12733.2	chr15	+	177	1	Intergenic	novelGene_10623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCAGATCCTTTA	NA	False	NA	NA	False	NA	NA	NA	98611341	98611518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98611300_98611500
ES.12734.1	chr15	-	722	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	17	-5	17	1	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTCACTCGGTA	NA	False	NA	NA	False	AATAAA	-20	NA	98626062	98622245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ES.12734.10	chr15	-	629	5	NIC	ENSMUSG00000003355.8	novel	734	6	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	280.317119527153	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	98626048	98622253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98622484_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ES.12734.12	chr15	-	1796	3	NIC	ENSMUSG00000003355.8	novel	734	6	NA	NA	-8	26	intron_retention	FALSE	canonical	3	632	junction_2	2.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAAAAACCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	98626041	98623584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98624815_98625091_98625180_98625563
ES.12734.3	chr15	-	638	6	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	270.030368662489	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGTATTTTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	98625993	98622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98622484_98624364_98624436_98624780_98624815_98625101_98625180_98625563_98625630_98625837
ES.12734.4	chr15	-	1332	2	ISM	ENSMUSG00000003355.8	ENSMUST00000230743.2	1314	4	567	7	555	-3	3prime_fragment	FALSE	canonical	3	718	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	98625466	98622253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98622484_98624364
ES.12734.5	chr15	-	918	4	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	573	-3	intron_retention	FALSE	canonical	3	27	junction_3	308.426472419098	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	98625448	98622253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98622484_98624364_98624815_98625091_98625180_98625298
ES.12734.6	chr15	-	587	6	NNC	ENSMUSG00000003355.8	novel	734	6	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	261.122959542052	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	98626028	98622253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98622391_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ES.12734.7	chr15	-	3121	1	FSM	ENSMUSG00000003355.8	ENSMUST00000229562.2	2411	1	647	-1357	647	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	98625374	98622253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98622300_98625400
ES.12735.1	chr15	-	4915	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	58	239	intron_retention	TRUE	non_canonical	0	0	junction_1	277.253832254849	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTTGTTGT	1857	False	NA	-1	True	AATAAA	-22	NA	98661034	98634275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636403_98636442_98638376_98638871_98639316_98640473_98640711_98660860
ES.12735.10	chr15	-	4723	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	38	237	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTGCTTTGTTGTT	1837	False	NA	-3	True	AATAAA	-20	NA	98661054	98634277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636401_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.11	chr15	-	4664	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	9897	237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	275.802465543729	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTGCTTTGTTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	98650976	98634277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98650883
ES.12735.12	chr15	-	4058	2	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	15	237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTGCTTTGTTGTT	1814	False	NA	-3	True	AATAAA	-20	NA	98661077	98634277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638270_98661011
ES.12735.14	chr15	-	4711	4	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-18	235	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	307.669736351606	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTGCTTTGTTG	1778	False	NA	-5	True	AATAAA	-18	NA	98661113	98634279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98638376_98638871_98638997_98640473_98640711_98660860
ES.12735.15	chr15	-	3566	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-18	-981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTGTCCTTGAGCAAC	1778	False	NA	0	True	ATTAAA	-25	NA	98661113	98635495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636403_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.16	chr15	-	3606	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	-22	982	-19	-982	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTGTCCTTGAGCAA	1777	False	NA	-1	True	ATTAAA	-24	NA	98661114	98635496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.19	chr15	-	3499	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	39	-990	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGCAGCCCTTTGTCC	1838	False	NA	-9	True	ATTAAA	-16	NA	98661053	98635504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636411_98636448_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.2	chr15	-	4826	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	-21	-239	-18	239	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTTGTTGT	1778	False	NA	-1	True	AATAAA	-22	NA	98661113	98634275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.20	chr15	-	3243	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	20221	-990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	275.802465543729	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGCAGCCCTTTGTCC	4595	False	NA	-9	True	ATTAAA	-16	NA	98640652	98635504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636412_98636454_98638376_98638871_98638997_98639204_98639316_98640473
ES.12735.21	chr15	-	3527	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-990	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGCAGCCCTTTGTCC	1798	False	NA	-9	True	ATTAAA	-16	NA	98661093	98635504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636341_98636390_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.22	chr15	-	2863	3	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	49	-991	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCGCAGCCCTTTGTC	1848	False	NA	-10	True	ATTAAA	-15	NA	98661043	98635505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636401_98636442_98638319_98660951
ES.12735.23	chr15	-	3456	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	75	-992	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1874	False	NA	-11	True	ATTAAA	-14	NA	98661017	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636378_98636420_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.24	chr15	-	3324	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-18	-992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	308.949186760542	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1778	False	NA	-11	True	ATTAAA	-14	NA	98661113	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636403_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98661091
ES.12735.26	chr15	-	3519	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	1	-992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1797	False	NA	-11	True	ATTAAA	-14	NA	98661094	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636725_98636781_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.28	chr15	-	3163	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-85	-992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.012345443812	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1933	False	NA	-11	True	ATTAAA	-14	NA	98660958	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636403_98636442_98638376_98638871_98638997_98639204_98639316_98660860
ES.12735.3	chr15	-	4955	4	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	58	239	intron_retention	FALSE	canonical	3	612	junction_2	20.3141986469235	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTTGTTGT	1857	False	NA	-1	True	AATAAA	-22	NA	98661034	98634275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98638376_98638871_98639316_98640473_98640711_98660860
ES.12735.30	chr15	-	3175	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	43	-992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	318.721175167261	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1842	False	NA	-11	True	ATTAAA	-14	NA	98661049	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636401_98636442_98638177_98639194_98639316_98640473_98640711_98660860
ES.12735.31	chr15	-	3386	4	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	77	-992	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	307.669736351606	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1876	False	NA	-11	True	ATTAAA	-14	NA	98661015	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98638376_98638871_98638997_98640473_98640711_98660860
ES.12735.32	chr15	-	2789	2	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	60	-992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1859	False	NA	-11	True	ATTAAA	-14	NA	98661032	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638124_98660860
ES.12735.33	chr15	-	3418	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	67	-992	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1866	False	NA	-11	True	ATTAAA	-14	NA	98661025	98635506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636354_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.37	chr15	-	3299	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-18	-993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.399672560401	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1778	False	NA	-12	True	ATTAAA	-13	NA	98661113	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636401_98636442_98638376_98638871_98638975_98639204_98639316_98640473_98640711_98661091
ES.12735.38	chr15	-	3494	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	35	-993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1834	False	NA	-12	True	ATTAAA	-13	NA	98661057	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636405_98636448_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.41	chr15	-	3526	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-993	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1798	False	NA	-12	True	ATTAAA	-13	NA	98661093	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636395_98636442_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.42	chr15	-	3332	4	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	4	-993	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	305.487588400358	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1803	False	NA	-12	True	ATTAAA	-13	NA	98661088	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98638376_98638871_98638997_98639204_98639316_98660860
ES.12735.43	chr15	-	4273	2	ISM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	20816	993	20597	-993	intron_retention	FALSE	canonical	3	644	junction_1	0	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	4971	False	NA	-12	True	ATTAAA	-13	NA	98640276	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98638376_98638871
ES.12735.46	chr15	-	3525	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-993	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1798	False	NA	-12	True	ATTAAA	-13	NA	98661093	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636432_98636480_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.47	chr15	-	2313	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	52	-993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	1851	False	NA	-12	True	ATTAAA	-13	NA	98661040	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98637024_98638231_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.51	chr15	-	5113	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	850	-993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	275.802465543729	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGCGCAGCCCTTTG	2868	False	NA	-12	True	ATTAAA	-13	NA	98660023	98635507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98658251
ES.12735.54	chr15	-	3571	5	NIC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	37	-994	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	271.478820536704	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGCGCAGCCCTTT	2055	False	NA	-13	True	ATTAAA	-12	NA	98660836	98635508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660605
ES.12735.55	chr15	-	3477	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	52	-995	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1851	False	NA	-14	True	ATTAAA	-11	NA	98661040	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636439_98636480_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.57	chr15	-	3376	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-101	-995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	324.012345443812	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1917	False	NA	-14	True	ATTAAA	-11	NA	98660974	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638376_98638871_98638997_98639204_98639317_98640473_98640633_98660860
ES.12735.58	chr15	-	3513	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	1	-995	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1800	False	NA	-14	True	ATTAAA	-11	NA	98661091	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636392_98636448_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.59	chr15	-	1903	2	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	35	-995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1834	False	NA	-14	True	ATTAAA	-11	NA	98661057	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98637233_98660877
ES.12735.60	chr15	-	3518	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	6	-995	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1805	False	NA	-14	True	ATTAAA	-11	NA	98661086	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636382_98636428_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.61	chr15	-	3364	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-995	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	275.802465543729	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1798	False	NA	-14	True	ATTAAA	-11	NA	98661093	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98661068
ES.12735.62	chr15	-	3319	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	6	-995	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1805	False	NA	-14	True	ATTAAA	-11	NA	98661086	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98637295_98637540_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.63	chr15	-	3465	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	63	-995	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1862	False	NA	-14	True	ATTAAA	-11	NA	98661029	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636354_98636396_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.64	chr15	-	3526	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-1	-995	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1798	False	NA	-14	True	ATTAAA	-11	NA	98661093	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636447_98636492_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.65	chr15	-	3360	5	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-17	-995	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	270.614116409326	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGGCGCAGCCCTT	1779	False	NA	-14	True	ATTAAA	-11	NA	98661112	98635509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98661091
ES.12735.66	chr15	-	1165	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	-2	3403	1	1020	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAAGAGTGGGGTGTT	1797	False	NA	0	True	AATGAA	-38	NA	98661094	98637917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.67	chr15	-	918	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	134	3514	-85	909	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACACGGTCAGCCCCCA	1933	False	NA	-111	True	NA	NA	NA	98660958	98638028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.7	chr15	-	4702	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	58	238	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTGCTTTGTTGTTG	1857	False	NA	-2	True	AATAAA	-21	NA	98661034	98634276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636405_98636448_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.8	chr15	-	3568	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	-18	238	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	257.430689701131	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTGCTTTGTTGTTG	1778	False	NA	-2	True	AATAAA	-21	NA	98661113	98634276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98634969_98636225_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12735.9	chr15	-	3295	6	NNC	ENSMUSG00000051853.11	novel	4566	5	NA	NA	77	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.430689701131	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTGCTTTGTTGTTG	1876	False	NA	-2	True	AATAAA	-21	NA	98661015	98634276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98636693_98638124_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ES.12736.1	chr15	+	1756	1	Intergenic	novelGene_10624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	98662775	98664531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98662800_98664500
ES.12737.1	chr15	-	182	1	Intergenic	novelGene_10625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTTGTCCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	98682011	98681829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98681800_98682000
ES.12738.1	chr15	+	2050	4	NNC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	0	6	intron_retention	TRUE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTTTTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	98704905	98713964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98705106_98711286_98711409_98712086_98712817_98712966
ES.12738.2	chr15	+	2272	4	NNC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	7	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	10.3708994574027	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTGCCTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	98704912	98713955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98705106_98711122_98711409_98712086_98712746_98712821
ES.12738.3	chr15	+	1980	4	NNC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	42	-24	intron_retention	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGGCTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	98704947	98713934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98705106_98711286_98711409_98712086_98712872_98713019
ES.12738.4	chr15	+	2056	4	NNC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	106	0	intron_retention	TRUE	canonical	0	0	junction_1	0.942809041582063	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTCTTGTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98705011	98713958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98705106_98711286_98711526_98712086_98712892_98713040
ES.12738.5	chr15	+	2004	4	NNC	ENSMUSG00000097414.3	novel	2224	3	NA	NA	133	-29	intron_retention	TRUE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAAATGGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	98705038	98713929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98705106_98711280_98711526_98712086_98712769_98712919
ES.12738.6	chr15	+	3248	2	NNC	ENSMUSG00000097414.3	novel	411	2	NA	NA	-389	259	intron_retention	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGATTTATTTTAACA	2583	False	NA	NA	False	NA	NA	NA	98710819	98714217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98712817_98712966
ES.12738.7	chr15	+	2760	2	NNC	ENSMUSG00000097414.3	novel	411	2	NA	NA	-189	-29	intron_retention	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAAATGGCTTTTGT	2783	False	NA	NA	False	NA	NA	NA	98711019	98713929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98712817_98712966
ES.12739.1	chr15	-	2103	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	50	-501	-17	501	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	9399	False	NA	NA	False	NA	NA	NA	98729352	98710176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ES.12739.10	chr15	-	2641	8	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	87	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	160.090153172696	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9503	False	NA	-5	True	ATTAAA	-21	NA	98729248	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712887_98713035_98713867_98723568_98723615_98729015
ES.12739.11	chr15	-	2866	9	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	81	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	153.453932419472	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9497	False	NA	-5	True	ATTAAA	-21	NA	98729254	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712750_98712824_98713437_98713539_98713867_98723568_98723615_98728767
ES.12739.12	chr15	-	1616	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	109.322254696383	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCAGTGTTTGATTTCT	9400	False	NA	-6	True	ATTAAA	-20	NA	98729351	98710679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713136_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ES.12739.14	chr15	-	2899	9	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	153.453932419472	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCAGTGTTTGATTTC	9388	False	NA	-7	True	ATTAAA	-19	NA	98729363	98710680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712887_98713035_98713437_98713539_98713867_98723568_98723615_98728767
ES.12739.15	chr15	-	1753	11	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	244	junction_10	41.6135795143845	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCAGTGTTTGATTTC	9400	False	NA	-7	True	ATTAAA	-19	NA	98729351	98710680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ES.12739.16	chr15	-	1388	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-210	-219	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	103.380465568487	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTCGGTAAAATATTTT	9689	False	NA	NA	False	NA	NA	NA	98729062	98710896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729015
ES.12739.17	chr15	-	179	1	Intergenic	novelGene_10626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	98714392	98714213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98714200_98714400
ES.12739.18	chr15	-	2878	3	NNC	ENSMUSG00000067713.8	novel	384	2	NA	NA	10	-3222	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTTAAGGCCCCTCAG	9426	False	NA	NA	False	NA	NA	NA	98729325	98716277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98718151_98723167_98723615_98728767
ES.12739.19	chr15	-	5103	4	NNC	ENSMUSG00000067713.8	novel	384	2	NA	NA	-6	-3222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.022703073012	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTTAAGGCCCCTCAG	9410	False	NA	NA	False	NA	NA	NA	98729341	98716277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98716584_98716978_98721403_98723272_98723615_98729310
ES.12739.2	chr15	-	1673	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	-20	-1	-20	1	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTTTGATTTCTGCA	9329	False	NA	-3	True	ATTAAA	-23	NA	98729422	98710676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ES.12739.20	chr15	-	2196	2	Intergenic	novelGene_10627	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTTAAGGCCCCTCAG	9640	False	NA	NA	False	NA	NA	NA	98718513	98716277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98717240_98717279
ES.12739.21	chr15	-	2481	1	Intergenic	novelGene_10628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9372	False	NA	NA	False	NA	NA	NA	98718781	98716300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98716300_98718800
ES.12739.22	chr15	-	4459	1	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	394	4133	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	4538	False	NA	NA	False	AAGAAA	-22	NA	98723615	98719156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98719200_98723600
ES.12739.3	chr15	-	1793	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	103.380465568487	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9502	False	NA	-5	True	ATTAAA	-21	NA	98729249	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729015
ES.12739.4	chr15	-	2588	8	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	6	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	129.791512568018	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9388	False	NA	-5	True	ATTAAA	-21	NA	98729363	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712871_98712944_98713437_98713539_98713867_98723568_98723615_98729310
ES.12739.6	chr15	-	2356	9	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	125.648256553762	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9410	False	NA	-5	True	ATTAAA	-21	NA	98729341	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712887_98713035_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ES.12739.7	chr15	-	2041	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	86	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9502	False	NA	-5	True	ATTAAA	-21	NA	98729249	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
ES.12739.8	chr15	-	2439	9	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	123.841569656558	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9399	False	NA	-5	True	ATTAAA	-21	NA	98729352	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712750_98712824_98713241_98713377_98713437_98713539_98713867_98723568_98723615_98729310
ES.12739.9	chr15	-	2514	11	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	87	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	143.976421680774	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTTGATTTCTG	9503	False	NA	-5	True	ATTAAA	-21	NA	98729248	98710678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712887_98713035_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
ES.1274.1	chr1	-	2924	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	-47	-23	-47	23	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGGCCCTTGACCGT	NA	False	NA	9	True	ACTAAA	-42	NA	131025610	130981413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ES.1274.2	chr1	-	2661	7	NIC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	14154	0	intron_retention	FALSE	canonical	3	81	junction_5	18.4338155452298	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCATTCTTTTTCTTC	NA	False	NA	-14	True	ACTAAA	-19	NA	130986109	130981436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130985358_130985737_130985818_130986088
ES.1274.3	chr1	-	2741	11	NNC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.2387238280777	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025550	130981440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130981654_130981749_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ES.1274.4	chr1	-	3129	9	NIC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	81	junction_6	17.9930542154466	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025571	130981440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130986154_130986359_130986500_131025025
ES.1274.5	chr1	-	2654	11	NNC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	230	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	48.6994866502718	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTCATTCTTTTT	NA	False	NA	-18	True	ACTAAA	-15	NA	131025333	130981440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_130990244_130990279_131025025
ES.1274.6	chr1	-	2835	10	NNC	ENSMUSG00000016528.11	novel	2854	10	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.2090217749545	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTTTTCATTCTTTT	NA	False	NA	-19	True	ACTAAA	-14	NA	131025543	130981441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986082_130986154_130986359_130986500_131025025
ES.1274.8	chr1	-	1555	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	-11	1310	-11	-1310	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGCCTCCTGTTCTCT	NA	False	NA	NA	False	AATATA	-30	NA	131025574	130982746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ES.12740.1	chr15	+	7889	18	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGCTGCTGCTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	98733280	98748937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98733348_98734954_98735089_98735176_98735313_98737157_98738298_98738440_98738568_98738640_98738776_98739290_98739425_98739622_98739796_98739908_98739985_98740623_98740784_98740939_98741107_98741231_98741373_98741474_98744426_98744521_98744757_98744854_98744924_98745020_98745103_98745237_98745363_98747100
ES.12741.1	chr15	-	3732	7	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	31831	5	-2188	-2	3prime_fragment	FALSE	canonical	3	7	junction_3	33.8004766567311	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGCCTCTGTCCCAT	5420	False	NA	NA	False	NA	NA	NA	98737233	98729554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157
ES.12741.2	chr15	-	3832	8	NIC	ENSMUSG00000048154.18	novel	19805	55	NA	NA	-2263	-25	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	33.3674655181067	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAGAACATTTT	5345	False	NA	NA	False	NA	NA	NA	98737308	98729577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734461_98734510_98734955_98735087_98735175_98735313_98737157
ES.12741.3	chr15	-	5316	12	NNC	ENSMUSG00000048154.18	novel	19805	55	NA	NA	-4636	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.7328726498496	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAGAACATTTT	2972	False	NA	NA	False	NA	NA	NA	98739681	98729577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98733442_98733531_98734955_98735087_98735175_98735313_98737157_98738299_98738441_98738570_98738642_98738776_98739290_98739422_98739619
ES.12741.5	chr15	-	7762	16	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	25488	254	3542	-251	3prime_fragment	FALSE	canonical	3	7	junction_3	23.2191491852929	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTCTTTTGTGTTGTG	NA	False	NA	-4	True	AATAAA	-26	NA	98743576	98729803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157_98738299_98738441_98738570_98738642_98738776_98739290_98739422_98739619_98739796_98739908_98739985_98740623_98740784_98740939_98741108_98741232_98741374_98741475
ES.12741.7	chr15	-	2004	5	ISM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	34025	1473	6	1159	3prime_fragment	FALSE	canonical	3	7	junction_3	25.8783210429116	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACCAGTTTATAAATG	7614	False	NA	NA	False	TATAAA	-19	NA	98735039	98731022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955
ES.12741.8	chr15	-	8541	20	NIC	ENSMUSG00000048154.18	novel	19805	55	NA	NA	-1009	614	intron_retention	FALSE	canonical	3	7	junction_3	23.7581302602415	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTGTTTTTAATTATG	6959	False	NA	NA	False	NA	NA	NA	98748127	98731567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157_98738299_98738441_98738570_98738642_98738776_98739290_98739422_98739619_98739796_98739908_98739985_98740623_98741108_98741232_98741374_98741475_98744428_98744523_98744757_98744854_98744922_98745018_98745104_98745238_98745363_98747100
ES.12742.1	chr15	+	7314	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98750623	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753960_98754066_98754152_98754267_98754481_98754710_98755268_98755317_98755406_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762087_98762221_98762373_98762529_98762688_98762813_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.10	chr15	+	6685	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751262	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751583_98751669_98751725_98751916_98751995_98752069_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753949_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758926_98759050_98759484_98760564_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.11	chr15	+	6858	30	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751262	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98752496_98752593_98752735_98752907_98753012_98753180_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.12	chr15	+	3630	21	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGGTCACTGTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	98751262	98760452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752906_98753017_98753189_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754153_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758926_98759043_98759480
ES.12742.13	chr15	+	6661	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751262	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751583_98751669_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753016_98753189_98753259_98753417_98753573_98753654_98753780_98753959_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755764_98755920_98756108_98757392_98757493_98758511_98758624_98758929_98759043_98759480_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.14	chr15	+	6657	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAATCCAACAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	98751262	98769086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753016_98753189_98753259_98753417_98753573_98753654_98753778_98753954_98754066_98754152_98754270_98754492_98754713_98755270_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758625_98758931_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.15	chr15	+	6675	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751263	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751583_98751669_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758926_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.17	chr15	+	6264	30	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAATCCAACAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	98751923	98769086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751988_98752063_98752289_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756104_98757390_98757493_98758511_98758624_98758926_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.19	chr15	+	6283	30	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751923	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751988_98752063_98752311_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754492_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.2	chr15	+	7304	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98750631	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751669_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753016_98753189_98753259_98753417_98753578_98753659_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755316_98755402_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758625_98758931_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.20	chr15	+	6290	30	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751924	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751988_98752063_98752309_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753777_98753955_98754066_98754152_98754277_98754493_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755923_98756108_98757392_98757493_98758511_98758624_98758926_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768899
ES.12742.22	chr15	+	6505	29	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751924	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764380_98764550_98764641_98768896
ES.12742.23	chr15	+	6272	30	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751924	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751988_98752063_98752289_98752415_98752496_98752593_98752735_98752905_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757494_98758511_98758629_98758934_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.24	chr15	+	5006	21	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98754230	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758926_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98763991_98764256_98764384_98764552_98764641_98768896
ES.12742.3	chr15	+	7307	31	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98750699	98769064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751583_98751669_98751729_98751916_98751988_98752063_98752496_98752593_98752735_98752907_98753008_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755511_98755598_98755771_98755924_98756108_98757392_98757494_98758511_98758624_98758926_98759050_98759485_98760565_98760656_98762078_98762215_98762370_98762527_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.30	chr15	+	4236	14	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98757412	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98768894
ES.12742.33	chr15	+	4367	14	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98757414	98769064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98763175_98763381_98763545_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.39	chr15	+	4347	15	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98757414	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98757493_98758511_98758624_98758926_98759050_98759484_98760589_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.4	chr15	+	670	1	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGTGCCCGCTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	98750699	98751369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98750700_98751400
ES.12742.41	chr15	+	4307	15	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAATCCAACAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	98757414	98769086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98757493_98758511_98758624_98758926_98759050_98759484_98760567_98760659_98762078_98762215_98762373_98762529_98762688_98762814_98762929_98763008_98763175_98763381_98763545_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.44	chr15	+	7117	3	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98757414	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98758624_98758929_98764641_98768896
ES.12742.46	chr15	+	4314	15	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98757414	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98757493_98758511_98758624_98758929_98759050_98759484_98760566_98760660_98762089_98762225_98762380_98762538_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763788_98763882_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.5	chr15	+	6688	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751258	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751728_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753775_98753944_98754066_98754152_98754271_98754490_98754710_98755269_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.51	chr15	+	2622	10	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98761087	98769064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762094_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763173_98763380_98763545_98763669_98763775_98763871_98764384_98764552_98764641_98768896
ES.12742.53	chr15	+	3154	6	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98761151	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762373_98762529_98762688_98762814_98762929_98763007_98764384_98764552_98764641_98768896
ES.12742.55	chr15	+	2531	10	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98761152	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.58	chr15	+	2393	11	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGGGTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98761152	98769056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762089_98762225_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763788_98763882_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.59	chr15	+	2470	12	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98761152	98769063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98765268_98765335_98768896
ES.12742.6	chr15	+	6698	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751261	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760589_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.62	chr15	+	3099	6	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAATCCAACAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	98761152	98769086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762373_98762529_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.65	chr15	+	2268	10	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98761152	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763669_98763775_98763871_98764097_98764255_98764384_98764552_98764641_98768896
ES.12742.66	chr15	+	2493	11	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98761152	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762097_98762230_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763546_98763671_98763782_98763882_98764103_98764258_98764450_98764554_98764641_98768896
ES.12742.68	chr15	+	2180	11	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98761369	98769063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762078_98762215_98762380_98762538_98762688_98762814_98762929_98763008_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.7	chr15	+	6675	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98751262	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751587_98751670_98751725_98751916_98751995_98752069_98752310_98752415_98752493_98752591_98752735_98752907_98753015_98753183_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758627_98758934_98759050_98759484_98760565_98760656_98762097_98762230_98762377_98762532_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.72	chr15	+	2351	10	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACAGGGGTTCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	98761369	98769093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98762373_98762529_98762688_98762814_98762929_98763007_98763175_98763381_98763545_98763669_98763775_98763871_98764103_98764258_98764384_98764552_98764641_98768896
ES.12742.8	chr15	+	6640	32	Antisense	novelGene_ENSMUSG00000048154.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98751262	98769063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98751583_98751669_98751724_98751916_98751988_98752063_98752310_98752415_98752496_98752593_98752735_98752907_98753016_98753189_98753259_98753417_98753573_98753654_98753780_98753958_98754066_98754152_98754270_98754486_98754710_98755268_98755317_98755405_98755513_98755599_98755771_98755924_98756108_98757392_98757493_98758511_98758624_98758929_98759050_98759484_98760565_98760656_98762097_98762230_98762373_98762529_98762688_98762814_98762925_98763002_98763174_98763380_98763545_98763669_98763788_98763882_98764103_98764258_98764384_98764552_98764641_98768896
ES.12743.1	chr15	-	1727	7	ISM	ENSMUSG00000023755.11	ENSMUST00000229352.2	1604	8	12434	1	6	-1	3prime_fragment	FALSE	canonical	3	176	junction_2	18.3212081115484	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779355	98775659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98776179_98776333_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ES.12743.2	chr15	-	1198	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	62	1	62	-1	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779299	98775659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ES.12743.3	chr15	-	882	6	NIC	ENSMUSG00000023755.11	novel	1261	8	NA	NA	166	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	79.4239258662023	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	95	False	NA	-23	True	AATAAA	-19	NA	98778461	98775659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98776179_98776333_98776416_98777139_98777197_98777285_98777369_98777657_98777726_98778388
ES.12743.4	chr15	-	3430	2	ISM	ENSMUSG00000023755.11	ENSMUST00000229348.2	1069	8	-87	1	-29	-1	intron_retention	FALSE	canonical	3	177	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	False	NA	-23	True	AATAAA	-19	NA	98779244	98775659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98776179_98776333
ES.12743.7	chr15	-	1285	8	FSM	ENSMUSG00000023755.11	ENSMUST00000147015.2	1038	8	18	-265	18	-3	multi-exon	FALSE	canonical	3	19	junction_7	64.8753907620649	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTTTGTGTCTGGAGAG	NA	False	NA	-25	True	AATAAA	-17	NA	98778953	98775661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98778595
ES.12743.8	chr15	-	3593	1	NIC	ENSMUSG00000023755.11	novel	1261	8	NA	NA	-42	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTTGTGTCTGGA	NA	False	NA	-28	True	AATAAA	-14	NA	98779257	98775664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98775700_98779300
ES.12743.9	chr15	-	2366	4	NIC	ENSMUSG00000023755.11	novel	1604	8	NA	NA	34	-6	intron_retention	FALSE	canonical	3	177	junction_1	19.3964487013015	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTTGTGTCTGGA	NA	False	NA	-28	True	AATAAA	-14	NA	98778937	98775664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98776179_98776333_98777197_98777285_98777726_98778388
ES.12744.1	chr15	-	179	1	Intergenic	novelGene_10629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAC	NA	False	NA	NA	False	NA	NA	NA	98782508	98782329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98782300_98782500
ES.12745.1	chr15	+	218	1	Intergenic	novelGene_10630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTCTTCTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	98785845	98786063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98785800_98786100
ES.12746.1	chr15	+	691	2	Antisense	novelGene_ENSMUSG00000022999.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAACACTTGTACTTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	98815506	98827433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98815938_98827173
ES.12747.1	chr15	+	675	2	FSM	ENSMUSG00000116223.2	ENSMUST00000229156.2	1345	2	-236	906	-236	185	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGACCAGCACAGAAAGCA	1110	False	NA	NA	False	NA	NA	NA	98831969	98837528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98832301_98837184
ES.12747.2	chr15	+	6476	1	Genic_Genomic	ENSMUSG00000116223.2	novel	NA	NA	NA	NA	-231	16	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTCTAGATACTTTT	1115	False	NA	NA	False	AATAAA	-34	NA	98831974	98838450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_98832000_98838400
ES.12747.3	chr15	+	4678	2	FSM	ENSMUSG00000116494.2_ENSMUSG00000116223.2	ENSMUST00000229156.2	1345	2	-220	-3113	-220	1	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTGGCTCTTGTCTGT	1126	False	NA	NA	False	NA	NA	NA	98831985	98841547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98832301_98837184
ES.12748.1	chr15	-	191	2	Antisense	novelGene_ENSMUSG00000116494.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACG	2011	False	NA	NA	False	NA	NA	NA	98844291	98788213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98788383_98844269
ES.12748.14	chr15	-	2334	18	NNC	ENSMUSG00000022999.16	novel	2304	17	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	21.5009455010575	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTTGTCCCTGTGTC	NA	False	NA	-6	True	AATAAA	-32	NA	98815925	98801800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98807438_98807659_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ES.12748.17	chr15	-	2242	13	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	23	2747	23	-446	5prime_fragment	FALSE	canonical	3	43	junction_5	11.8872013340212	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	98816089	98804544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ES.12748.18	chr15	-	1594	6	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	83	6774	83	2811	5prime_fragment	FALSE	canonical	3	52	junction_5	12.432216214336	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCGGCTTTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	98816029	98808571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ES.12748.19	chr15	-	247	1	Intergenic	novelGene_10632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACTGTTTGTTCAATC	9819	False	NA	NA	False	NA	NA	NA	98822286	98822039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98822000_98822300
ES.12748.2	chr15	-	189	1	Intergenic	novelGene_10631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACG	NA	False	NA	NA	False	NA	NA	NA	98788402	98788213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98788200_98788400
ES.12748.20	chr15	-	2342	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	128	-727	1	727	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAAGGCCAGCCTGAG	159	False	NA	NA	False	NA	NA	NA	98832318	98828578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ES.12748.21	chr15	-	2220	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	127	-604	0	604	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTTGCGATGTCTTA	158	False	NA	NA	False	GATAAA	-17	NA	98832319	98828701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ES.12748.22	chr15	-	1794	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	-52	1	-52	-1	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCTGGATACTTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	98832498	98829306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ES.12748.23	chr15	-	3117	1	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	21	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTCTGGATACTT	52	False	NA	NA	False	AGTAAA	-15	NA	98832425	98829308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98829300_98832400
ES.12748.27	chr15	-	2741	3	ISM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	128	11	1	-11	intron_retention	FALSE	canonical	3	3388	junction_1	1016.5	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_98830444_98830572_98830722_98830853
ES.12748.28	chr15	-	1656	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	-9	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5428.71795792217	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	22	False	NA	NA	False	AGTAAA	-7	NA	98832455	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830693_98830909_98831077_98832213
ES.12748.29	chr15	-	1503	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5428.71795792217	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	158	False	NA	NA	False	AGTAAA	-7	NA	98832319	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830686_98830919_98831077_98832213
ES.12748.3	chr15	-	2378	3	FSM	ENSMUSG00000023000.6	ENSMUST00000023737.6	4242	3	-15	1879	-15	-1879	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGTGGTCAAATTCCA	7666	False	NA	NA	False	AATAAA	-17	NA	98796436	98790911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98792442_98792693_98792956_98795850
ES.12748.30	chr15	-	1528	5	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	5	-11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	4701.41214822738	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	163	False	NA	NA	False	AGTAAA	-7	NA	98832314	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98830975_98831046_98831077_98832213
ES.12748.31	chr15	-	1602	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	2	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	2236.04000162987	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	160	False	NA	NA	False	AGTAAA	-7	NA	98832317	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98831069_98832206
ES.12748.32	chr15	-	1732	3	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	5	-11	intron_retention	FALSE	canonical	3	3388	junction_1	4721	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	163	False	NA	NA	False	AGTAAA	-7	NA	98832314	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98830444_98830572_98831077_98832213
ES.12748.33	chr15	-	1580	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5258.74321698847	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830435_98830587_98830722_98830853_98831077_98832213
ES.12748.34	chr15	-	1571	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5258.74321698847	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	160	False	NA	NA	False	AGTAAA	-7	NA	98832317	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830420_98830580_98830722_98830853_98831077_98832213
ES.12748.35	chr15	-	1909	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	514	-11	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_3	2218.10474654978	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	672	False	NA	NA	False	AGTAAA	-7	NA	98831805	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98831395
ES.12748.36	chr15	-	1587	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2236.04000162987	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98831056_98832209
ES.12748.37	chr15	-	1556	5	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	4701.41214822738	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830609_98830656_98830722_98830853_98831077_98832213
ES.12748.39	chr15	-	945	2	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830206_98832262
ES.12748.40	chr15	-	1502	3	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	-34	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6415	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	124	False	NA	NA	False	AGTAAA	-7	NA	98832353	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830841_98831077_98832213
ES.12748.41	chr15	-	1560	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	5253.7313089524	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	159	False	NA	NA	False	AGTAAA	-7	NA	98832318	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830400_98830572_98830722_98830853_98831077_98832213
ES.12748.43	chr15	-	1595	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2236.04000162987	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	158	False	NA	NA	False	AGTAAA	-7	NA	98832319	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98832223
ES.12748.44	chr15	-	1581	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5258.74321698847	4184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	158	False	NA	NA	False	AGTAAA	-7	NA	98832319	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830420_98830572_98830722_98830853_98831077_98832213
ES.12748.45	chr15	-	1521	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	532	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2236.04000162987	4184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	690	False	NA	NA	False	AGTAAA	-7	NA	98831787	98829316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98831765
ES.12749.1	chr15	+	2402	1	Antisense	novelGene_ENSMUSG00000116358.2_AS_novelGene_ENSMUSG00000072235.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATTGTGCAGGTGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	98851176	98853578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98851200_98853600
ES.1275.1	chr1	-	207	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTTAGAACCCAGAATT	NA	False	NA	NA	False	NA	NA	NA	131044163	131043956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131044000_131044200
ES.12750.1	chr15	-	1802	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	4	-3	4	3	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTTCTATATTTGA	NA	False	NA	-1	True	AATAAA	-22	NA	98851580	98847714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ES.12750.2	chr15	-	1948	2	NIC	ENSMUSG00000072235.7	novel	1803	4	NA	NA	156	-4	intron_retention	FALSE	canonical	3	1268	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTTGTGTTCTA	NA	False	NA	-8	True	AATAAA	-15	NA	98851428	98847721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_98849573_98851331
ES.12750.4	chr15	-	1625	4	NNC	ENSMUSG00000072235.7	novel	1803	4	NA	NA	525	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2050.41719332107	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTTGTGTTCTA	NA	False	NA	-8	True	AATAAA	-15	NA	98851059	98847721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98848896_98849068_98849218_98849349_98849573_98850980
ES.12750.6	chr15	-	1048	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	156	599	156	-599	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTGGTGATGTGGTTCC	NA	False	NA	NA	False	AATACA	-18	NA	98851428	98848316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ES.12751.1	chr15	+	1435	1	Intergenic	novelGene_10633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4871	False	NA	NA	False	NA	NA	NA	98875901	98877336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98875900_98877300
ES.12752.1	chr15	-	231	1	Intergenic	novelGene_10634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACCAGATGTCACTA	7891	False	NA	NA	False	GGGGCT	-8	NA	98884299	98884068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98884100_98884300
ES.12753.1	chr15	+	184	1	Intergenic	novelGene_10635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98901269	98901453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98901300_98901500
ES.12754.1	chr15	+	257	1	Intergenic	novelGene_10636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCCTTCCTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	98904259	98904516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98904300_98904500
ES.12754.2	chr15	+	154	1	Intergenic	novelGene_10637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98904260	98904414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98904300_98904400
ES.12755.1	chr15	+	159	1	Intergenic	novelGene_10638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	98905852	98906011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98905900_98906000
ES.12756.1	chr15	+	154	1	Intergenic	novelGene_10639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAAAGTTAAGG	NA	False	NA	NA	False	NA	NA	NA	98907617	98907771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98907600_98907800
ES.12757.1	chr15	+	174	2	Antisense	novelGene_ENSMUSG00000116371.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	98909401	98971905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_98909471_98971800
ES.12757.10	chr15	+	1343	8	NIC	ENSMUSG00000023484.15	novel	1757	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	10.6961751699056	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTGGTCTGAGGT	60	False	NA	10	True	AATAAA	-22	NA	98953816	98956858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956485
ES.12757.11	chr15	+	176	1	Intergenic	novelGene_10643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	98968505	98968681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98968500_98968700
ES.12757.12	chr15	+	175	1	Intergenic	novelGene_10644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAAATAAAACC	NA	False	NA	NA	False	NA	NA	NA	98971731	98971906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98971700_98971900
ES.12757.2	chr15	+	174	1	Intergenic	novelGene_10640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATAAATCTTAAA	2879	False	NA	NA	False	NA	NA	NA	98920553	98920727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98920600_98920700
ES.12757.3	chr15	+	1962	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	28	-8	28	8	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTTCATAGCTTTTCC	NA	False	NA	23	True	AATAAA	-30	NA	98927799	98935999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ES.12757.5	chr15	+	180	1	Intergenic	novelGene_10642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAATTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	98948982	98949162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_98949000_98949200
ES.12757.6	chr15	+	1821	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	-63	-1	-56	1	multi-exon	FALSE	canonical	3	16	junction_2	6.35290287978653	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACTGTGTTGGTCTGA	NA	False	NA	7	True	AATAAA	-19	NA	98952998	98956855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ES.12757.7	chr15	+	1685	8	NIC	ENSMUSG00000023484.15	novel	1757	9	NA	NA	-44	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.5404952832553	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTGGTCTGAGG	NA	False	NA	9	True	AATAAA	-21	NA	98953010	98956857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ES.12757.8	chr15	+	1699	9	NNC	ENSMUSG00000023484.15	novel	1757	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.1488915650922	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTACTGTGTTGGT	-8	True	NA	3	True	AATAAA	-15	NA	98953054	98956851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956544
ES.12757.9	chr15	+	1448	7	ISM	ENSMUSG00000023484.15	ENSMUST00000047104.15	1863	8	754	1	-41	-1	3prime_fragment	FALSE	canonical	3	16	junction_1	6.34209919681348	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGTGTTGGTCTGAGG	53	False	NA	9	True	AATAAA	-21	NA	98953809	98956857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98954046_98954221_98954318_98954649_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ES.12758.1	chr15	+	2263	14	FSM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	374	2	-29	0	multi-exon	FALSE	canonical	3	25	junction_1	17.6655315775427	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972829	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.10	chr15	+	2496	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	5	-4	intron_retention	FALSE	canonical	1	1	junction_11	36.3412491603212	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGAATGGGGCAGCC	NA	False	NA	4	True	AATAAA	-13	NA	98972872	98981280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976516_98976579_98976664_98976784_98978746_98978831_98979071_98979132_98979721_98979851_98980006_98980984_98981108
ES.12758.11	chr15	+	2548	12	ISM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	417	2	5	0	intron_retention	FALSE	canonical	3	25	junction_1	18.9173932822427	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972872	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006
ES.12758.12	chr15	+	2569	12	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	25.7373895945276	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATGGGGCAGCCAG	NA	False	NA	6	True	AATAAA	-15	NA	98972873	98981282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979712_98979851_98980006
ES.12758.13	chr15	+	2344	13	ISM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	418	2	6	0	intron_retention	FALSE	canonical	3	25	junction_1	18.3490462967425	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972873	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789
ES.12758.14	chr15	+	2323	13	NNC	ENSMUSG00000032783.10	novel	2639	14	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_4	28.6162347084463	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972874	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975229_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980984_98981108
ES.12758.15	chr15	+	2601	13	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	9	2	intron_retention	FALSE	canonical	0	0	junction_4	24.7975133161909	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972876	98981286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975229_98975409_98975548_98975712_98975793_98976127_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.16	chr15	+	2443	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	10	0	intron_retention	FALSE	canonical	3	68	junction_1	8.33166649996666	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972877	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980984_98981108
ES.12758.17	chr15	+	1654	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	23.6725692003293	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972879	98981286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979811_98980548_98980587_98980789_98980984_98981108
ES.12758.18	chr15	+	3279	11	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	15	0	intron_retention	FALSE	canonical	3	79	junction_6	4.23792402008342	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972882	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979851_98980006_98980984_98981108
ES.12758.19	chr15	+	1954	13	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.734703466093	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972886	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975229_98975753_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.2	chr15	+	2269	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	-9	-5	-9	1	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGCAGCCAGTGCTGTT	NA	False	NA	13	True	AATAAA	-22	NA	98972849	98981289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.20	chr15	+	4763	12	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	68	junction_1	8.12912323858478	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATGGGGCAGCCAG	NA	False	NA	6	True	AATAAA	-15	NA	98972895	98981282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98978831_98979071_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.21	chr15	+	2200	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	22.4367618881083	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972896	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980027_98980587_98980789_98980984_98981108
ES.12758.22	chr15	+	2048	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.4334085265603	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972896	98981286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975229_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980862_98980984_98981108
ES.12758.23	chr15	+	2192	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.4334085265603	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972900	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975229_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980660_98980789_98980984_98981108
ES.12758.24	chr15	+	2934	12	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	68	junction_8	8.17777677965419	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972900	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.25	chr15	+	1347	1	Genic_Genomic	ENSMUSG00000032783.10	novel	NA	NA	NA	NA	485	6	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGTGCTGTTGGTCTCC	NA	False	NA	20	True	AATAAA	-29	NA	98979949	98981296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_98979900_98981300
ES.12758.3	chr15	+	4981	11	NIC	ENSMUSG00000032783.10	novel	2639	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_1	19.177069640589	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972859	98981286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98978831_98979071_98979851_98980006_98980984_98981108
ES.12758.4	chr15	+	2811	13	NIC	ENSMUSG00000032783.10	novel	2639	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	25	junction_1	18.0252523483646	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972865	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.5	chr15	+	3472	11	NIC	ENSMUSG00000032783.10	novel	2639	14	NA	NA	-2	2	intron_retention	FALSE	canonical	3	25	junction_1	19.3762741516526	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGGGCAGCCAGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	98972865	98981286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976784_98978746_98978831_98979071_98979851_98980006_98980984_98981108
ES.12758.6	chr15	+	2507	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_9	8.01387685344754	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972867	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.8	chr15	+	2151	14	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.8339919358389	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972868	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975229_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ES.12758.9	chr15	+	3094	13	NNC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_7	32.1959063995547	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	False	NA	12	True	AATAAA	-21	NA	98972872	98981288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976516_98976579_98976664_98976784_98978746_98978831_98979071_98979851_98980006_98980984_98981108
ES.12759.1	chr15	+	1481	3	NIC	ENSMUSG00000038009.8	novel	381	3	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGGAATCCTAGCCCAG	1038	False	NA	4	True	AATAAA	-22	NA	98991046	99002619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98991152_98998703_98999657_99002196
ES.12759.10	chr15	+	3934	2	ISM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	167	3	167	-3	intron_retention	FALSE	canonical	3	51	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATACCACGGAATCCTAGC	4190	False	NA	0	True	AATAAA	-18	NA	98997459	99002615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_98997482_98998703
ES.12759.11	chr15	+	3656	14	Fusion	ENSMUSG00000051934.6_ENSMUSG00000038009.8	novel	1564	3	NA	NA	1653	-1	multi-exon	TRUE	canonical	0	0	junction_2	121.471646678332	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTAGCGCCGTCTCTC	5676	False	NA	17	True	AATAAA	-22	NA	98998945	99111095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_98999657_99002196_99002379_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.13	chr15	+	216	1	Intergenic	novelGene_10649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	99013943	99014159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99013900_99014200
ES.12759.14	chr15	+	157	1	Intergenic	novelGene_10650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	99022541	99022698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99022500_99022700
ES.12759.15	chr15	+	2820	13	NIC	ENSMUSG00000051934.6	novel	1275	8	NA	NA	47	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.953795362845	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTAGCGCCGTCTC	NA	False	NA	15	True	AATAAA	-20	NA	99023848	99111093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99023908_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.16	chr15	+	2920	13	NIC	ENSMUSG00000051934.6	novel	1275	8	NA	NA	78	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.953795362845	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTTAGCGCCGTCTCT	NA	False	NA	16	True	AATAAA	-21	NA	99023879	99111094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024038_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.17	chr15	+	3166	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	-64	-6	-64	6	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCGTCTCTCTAGGCCT	NA	False	NA	24	True	AATAAA	-29	NA	99024372	99111102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.18	chr15	+	3059	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	106.740435923585	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024423	99111096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.19	chr15	+	3191	14	NNC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.204794976602	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTAGCGCCGTCTCTC	NA	False	NA	17	True	AATAAA	-22	NA	99024429	99111095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99024769_99045450_99045540_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.2	chr15	+	2509	4	NNC	ENSMUSG00000038009.8	novel	381	3	NA	NA	-141	2211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.0426999794995	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	3882	False	NA	NA	False	NA	NA	NA	98997151	99004829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98997195_98998703_98999657_99002196_99002846_99003965
ES.12759.21	chr15	+	2804	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTTAGCGCCGTCTCT	NA	False	NA	16	True	AATAAA	-21	NA	99024429	99111094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.22	chr15	+	2749	11	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-7	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	142.985628648476	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGACTCCTTAGCGCCG	NA	False	NA	11	True	AATAAA	-16	NA	99024429	99111089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.23	chr15	+	6124	8	ISM	ENSMUSG00000051934.6	ENSMUST00000229493.2	2146	10	-255	15721	-6	4747	5prime_fragment	FALSE	canonical	3	296	junction_2	26.320628985723	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGTTCTAGTTTCCT	NA	False	NA	NA	False	ATTAAA	-37	NA	99024430	99088650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839
ES.12759.24	chr15	+	2641	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-2	-160	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGGAGATTTTTGTT	NA	False	NA	NA	False	AAGAAA	-20	NA	99024434	99110936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.25	chr15	+	3219	14	NNC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	131.797405941914	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGTGACTCCTTAGCGC	NA	False	NA	9	True	AATAAA	-14	NA	99024438	99111087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99024769_99047514_99047812_99064960_99065041_99069947_99070082_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.26	chr15	+	6198	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	3	-750	intron_retention	FALSE	canonical	3	296	junction_2	27.0365531570052	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTTGGGCCATCCTAA	NA	False	NA	NA	False	AAAAAG	-13	NA	99024439	99110346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.27	chr15	+	2933	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	3	160	3	-160	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGGAGATTTTTGTT	NA	False	NA	NA	False	AAGAAA	-20	NA	99024439	99110936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.3	chr15	+	1410	3	NIC	ENSMUSG00000038009.8	novel	381	3	NA	NA	-134	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	26	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGGAATCCTAGCCC	3889	False	NA	2	True	AATAAA	-20	NA	98997158	99002617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_98997195_98998703_98999657_99002196
ES.12759.30	chr15	+	3244	14	NNC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.204794976602	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTAGCGCCGTCTCTC	NA	False	NA	17	True	AATAAA	-22	NA	99024452	99111095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99024769_99045374_99045540_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.32	chr15	+	6948	14	NNC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	153.235557540261	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTTAGCGCCGTCTCT	NA	False	NA	16	True	AATAAA	-21	NA	99024453	99111094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99100918_99103478_99103589_99106713_99106817_99107688_99107790_99108762_99108978_99109930
ES.12759.34	chr15	+	2868	13	NNC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	-88	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	102.470998607194	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTTACTCGGCACCG	NA	False	NA	-54	True	AATATA	-14	NA	99024586	99111024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071288_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.35	chr15	+	6884	8	NIC	ENSMUSG00000051934.6	novel	2146	10	NA	NA	-65	-5524	intron_retention	FALSE	canonical	3	296	junction_2	27.0999661118848	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAGGAGAGGGGAAATA	NA	False	NA	NA	False	NA	NA	NA	99024609	99098847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99076447_99078461_99078642_99083839_99083976_99097088
ES.12759.36	chr15	+	2151	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	195	750	-43	-750	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTTGGGCCATCCTAA	NA	False	NA	NA	False	AAAAAG	-13	NA	99024631	99110346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ES.12759.37	chr15	+	173	1	Intergenic	novelGene_10652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTCACAGGAGA	NA	False	NA	NA	False	NA	NA	NA	99045400	99045573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99045400_99045600
ES.12759.38	chr15	+	204	1	Intergenic	novelGene_10653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTATCTCTATAAGT	1381	False	NA	NA	False	NA	NA	NA	99057286	99057490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99057300_99057500
ES.12759.39	chr15	+	5533	1	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	74739	603	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99099441	99104974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99099400_99105000
ES.12759.4	chr15	+	1580	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	-17	1	-17	-1	multi-exon	FALSE	canonical	3	51	junction_1	3.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGGAATCCTAGCCC	4006	False	NA	2	True	AATAAA	-20	NA	98997275	99002617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_98997482_98998703_98999657_99002196
ES.12759.5	chr15	+	3887	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	29	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	25.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGCCCAGGATATTG	4052	False	NA	11	True	AATAAA	-29	NA	98997321	99002626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98997482_98998703_99001391_99001586
ES.12759.6	chr15	+	3143	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	29	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATACCACGGAATCCTAGC	4052	False	NA	0	True	AATAAA	-18	NA	98997321	99002615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98998203_99000156_99001387_99001583
ES.12759.7	chr15	+	1415	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	18.5	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGGAATCCTAGCCC	4055	False	NA	2	True	AATAAA	-20	NA	98997324	99002617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98997366_98998703_98999657_99002196
ES.12759.8	chr15	+	1512	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGGAATCCTAGCCCAG	4060	False	NA	4	True	AATAAA	-22	NA	98997329	99002619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98997482_98998703_98999657_99002212
ES.12759.9	chr15	+	3740	3	NNC	ENSMUSG00000038009.8	novel	1564	3	NA	NA	92	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGACTACCGTCTCC	4115	False	NA	-92	True	AATATA	-12	NA	98997384	99002523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_98997497_98998703_99001379_99001570
ES.1276.1	chr1	-	3137	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	32	-5	32	5	multi-exon	FALSE	canonical	3	221	junction_1	9	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCATCCTTTCTCGGC	269	False	NA	NA	False	AATAAA	-30	NA	131066045	131055186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131057983_131063996_131064109_131065816
ES.1276.2	chr1	-	2844	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	35	285	35	-285	multi-exon	FALSE	canonical	3	221	junction_1	9	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGTGGCCGCAGTGTTG	272	False	NA	0	True	NA	NA	NA	131066042	131055476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131057983_131063996_131064109_131065816
ES.1276.3	chr1	-	2182	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	-5	987	-5	-987	multi-exon	FALSE	canonical	3	221	junction_1	9	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCATTGTTTTCATTCTC	232	False	NA	-4	True	ATTAAA	-18	NA	131066082	131056178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131057983_131063996_131064109_131065816
ES.1276.4	chr1	-	2188	4	NNC	ENSMUSG00000016526.9	novel	3164	3	NA	NA	-33	-987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.430719408295	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCATTGTTTTCATTCTC	299	False	NA	-4	True	ATTAAA	-18	NA	131066015	131056178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131057983_131060546_131060620_131063996_131064109_131065816
ES.12760.1	chr15	-	2426	2	Antisense	novelGene_ENSMUSG00000043091.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAACCAAAAGTAAAGGAAA	2656	False	NA	NA	False	NA	NA	NA	98934744	98904927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98905104_98932494
ES.12761.1	chr15	-	232	2	Antisense	novelGene_ENSMUSG00000098698.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGACATAGATAGCCACA	NA	False	NA	NA	False	NA	NA	NA	99005803	98944416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_98944505_99005659
ES.12761.2	chr15	-	232	1	Intergenic	novelGene_10641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGGACATAGATAGCCA	9043	False	NA	NA	False	NA	NA	NA	98944650	98944418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98944400_98944600
ES.12761.3	chr15	-	2117	2	FSM	ENSMUSG00000001076.8	ENSMUST00000064462.5	1474	2	-643	0	-643	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGCCTACCTTGG	6266	False	NA	NA	False	AATAAA	-17	NA	98986341	98981966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_98982815_98985072
ES.12761.4	chr15	-	1541	3	NNC	ENSMUSG00000001076.8	novel	1474	2	NA	NA	-637	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGCCTACCTTGG	6272	False	NA	NA	False	AATAAA	-17	NA	98986335	98981966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_98982128_98982697_98982815_98985072
ES.12761.5	chr15	-	134	1	Intergenic	novelGene_10645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAATGTTGGGCTG	2500	False	NA	NA	False	NA	NA	NA	98990107	98989973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98990000_98990100
ES.12761.6	chr15	-	176	1	Intergenic	novelGene_10646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	288	False	NA	NA	False	NA	NA	NA	98992319	98992143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98992100_98992300
ES.12761.7	chr15	-	161	1	Intergenic	novelGene_10647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGAGATGGCTCAG	126	False	NA	NA	False	NA	NA	NA	98992481	98992320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_98992300_98992500
ES.12762.1	chr15	-	592	1	Intergenic	novelGene_10648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99011757	99011165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99011200_99011800
ES.12763.1	chr15	-	1877	1	Intergenic	novelGene_10651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTTGTTAAGACACTAA	NA	False	NA	NA	False	NA	NA	NA	99036271	99034394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99034400_99036300
ES.12764.1	chr15	+	6007	14	NNC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-302	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	12.2150358407872	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACATTAAAAAAAAAT	NA	False	NA	-23	True	NA	NA	NA	99122439	99140668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99123467_99124188_99124423_99124861_99125001_99125789_99125924_99126353_99126598_99126727_99126887_99126977_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955_99136174_99137475_99138875_99139630_99139708_99139800
ES.12764.10	chr15	+	4363	13	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-246	7	intron_retention	FALSE	canonical	2	5	junction_1	6.62644114304369	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGTACTTTTTATTTA	NA	False	NA	14	True	AATAAA	-15	NA	99122495	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.11	chr15	+	2689	11	ISM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	-246	4366	-246	215	5prime_fragment	FALSE	canonical	3	10	junction_1	5.24309069156733	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGCTGTGTAAGTT	NA	False	NA	NA	False	TTTAAA	-16	NA	99122495	99136332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955
ES.12764.12	chr15	+	5056	8	NIC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-246	566	intron_retention	FALSE	canonical	3	23	junction_1	2.8642768079662	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGCTTTGGCTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	99122495	99136683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99124423_99124861_99124997_99125789_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955
ES.12764.13	chr15	+	3530	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-176	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.77990516428723	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTTTGGAACTCAGT	NA	False	NA	2	True	AATAAA	-3	NA	99122565	99140693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126607_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.14	chr15	+	6209	12	NNC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	15	-9	intron_retention	FALSE	canonical	0	0	junction_10	8.17171092881608	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACATTAAAAAAAAAT	NA	False	NA	-23	True	NA	NA	NA	99122756	99140668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99124423_99124861_99124997_99125789_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99138875_99139632_99139708_99139800
ES.12764.15	chr15	+	3624	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	1178	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.29446253492808	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTTTGGAACTCAGT	NA	False	NA	2	True	AATAAA	-3	NA	99123919	99140693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99124042_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.16	chr15	+	4011	14	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	1209	-5	intron_retention	FALSE	canonical	0	0	junction_1	7.56979360008772	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTTTGGAACTCAGT	NA	False	NA	2	True	AATAAA	-3	NA	99123950	99140693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99124042_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.17	chr15	+	3508	14	ISM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	1445	1	1445	-1	3prime_fragment	FALSE	canonical	3	23	junction_1	3.04988116947677	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGAACTCAGTACTT	NA	False	NA	6	True	AATAAA	-7	NA	99124186	99140697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.18	chr15	+	3240	13	NIC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-1384	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.67390962214756	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTTTGGAACTCAGT	NA	False	NA	2	True	AATAAA	-3	NA	99124315	99140693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99124423_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.2	chr15	+	4004	15	FSM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	-300	-6	-300	6	multi-exon	FALSE	canonical	3	10	junction_1	5.04520382468866	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAGTACTTTTTATTT	NA	False	NA	13	True	AATAAA	-14	NA	99122441	99140704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.3	chr15	+	3642	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-293	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGAACTCAGTACTT	NA	False	NA	6	True	AATAAA	-7	NA	99122448	99140697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.4	chr15	+	3667	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-292	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	8.03341236870823	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGTACTTTTTATTTA	NA	False	NA	14	True	AATAAA	-15	NA	99122449	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125771_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.5	chr15	+	5600	13	NNC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-292	-6	intron_retention	FALSE	canonical	2	3	junction_2	6.90561365846657	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTACTTTGGAACTCAG	NA	False	NA	1	True	AATAAA	-2	NA	99122449	99140692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99124423_99124861_99124997_99125771_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ES.12764.6	chr15	+	5677	12	NIC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-289	-9	intron_retention	FALSE	canonical	3	10	junction_1	5.67435873975536	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACATTAAAAAAAAAT	NA	False	NA	-23	True	NA	NA	NA	99122452	99140668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99127098_99127186_99127395_99130573_99130886_99131129_99131998_99135955_99136174_99137475_99138875_99139630_99139708_99139800
ES.12764.9	chr15	+	4922	14	NIC	ENSMUSG00000037579.8	novel	3698	15	NA	NA	-267	-3	intron_retention	FALSE	canonical	3	10	junction_1	5.22397749118451	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTTTGGAACTCAGTAC	NA	False	NA	4	True	AATAAA	-5	NA	99122474	99140695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99138875_99139630_99139708_99139800
ES.12765.1	chr15	+	1230	1	FSM	ENSMUSG00000100599.3	ENSMUST00000190683.2	1428	1	198	0	198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	99149916	99151146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99149900_99151100
ES.12766.1	chr15	-	2046	16	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	295.037052287034	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149829	99140697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99148627_99148771_99149742
ES.12766.10	chr15	-	2890	14	ISM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	302	3	258	-2	3prime_fragment	FALSE	canonical	3	647	junction_2	86.3173585701772	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149540	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343
ES.12766.11	chr15	-	6630	8	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	745	junction_3	63.4259973737674	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149801	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141649_99141805_99141889_99142025_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756
ES.12766.12	chr15	-	3375	10	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	10	-2	intron_retention	FALSE	canonical	3	15	junction_4	265.548256524516	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149816	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141889_99142025_99142600_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99147388_99147756_99148464_99149742
ES.12766.13	chr15	-	4559	13	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	647	junction_2	83.3641193133406	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149837	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99148464_99149742
ES.12766.14	chr15	-	4780	8	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	647	junction_2	99.1901904300572	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149800	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99147388_99147756
ES.12766.16	chr15	-	2630	13	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	0	3	intron_retention	FALSE	canonical	3	647	junction_2	88.8245774296481	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149842	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99145269_99146331_99146442_99146582_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.17	chr15	-	5752	4	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	34	3	intron_retention	FALSE	canonical	3	816	junction_2	33.5095342982992	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99147816	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141649_99141805_99145269_99146331_99146442_99146582
ES.12766.18	chr15	-	1965	14	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-2	3	intron_retention	FALSE	canonical	3	647	junction_1	81.5437588990391	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149800	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.19	chr15	-	1900	14	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	238.204650712999	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149820	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147888_99149602
ES.12766.2	chr15	-	2115	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	-200	1	-200	0	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99150042	99140698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.20	chr15	-	1894	14	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	240.660112899559	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149838	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142511_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.21	chr15	-	1715	14	NNC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	292.119088952053	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149800	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146364_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ES.12766.23	chr15	-	1890	14	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	240.660112899559	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149820	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142497_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.24	chr15	-	5248	6	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	211	3	intron_retention	FALSE	canonical	3	647	junction_2	107.218655093225	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99147639	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99145269_99146331
ES.12766.25	chr15	-	1884	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	227.259404062173	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149837	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141219_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.26	chr15	-	1885	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-2	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	300.733194179879	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149838	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146364_99146442_99146582_99146742_99147248_99147400_99147756_99147896_99148343_99148464_99149742
ES.12766.27	chr15	-	2362	13	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_5	247.80396598028	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	99149799	99140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142511_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.28	chr15	-	3869	7	ISM	ENSMUSG00000037570.17	ENSMUST00000230444.2	1521	11	1265	7	-490	1	intron_retention	FALSE	canonical	3	647	junction_2	100.306890203127	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAGCTTCTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	99145580	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528
ES.12766.29	chr15	-	2006	15	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	227.949611779016	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAGCTTCTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	99149800	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149602
ES.12766.3	chr15	-	1951	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	-172	-8	-156	0	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99149998	99140698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ES.12766.30	chr15	-	1645	13	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	245.027365251766	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAGCTTCTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	99149838	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99149742
ES.12766.31	chr15	-	1884	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	230.36607956087	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTAGCTTCTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	99149823	99140705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146446_99146591_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ES.12766.4	chr15	-	4145	12	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	647	junction_2	89.0192661847205	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99149838	99140698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99147388_99147756
ES.12766.5	chr15	-	1931	14	NIC	ENSMUSG00000037570.17	novel	1771	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	237.706073786079	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99149838	99140698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149602
ES.12766.6	chr15	-	1886	15	NIC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_13	227.139094757699	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99149821	99140698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147888_99148343_99148464_99149742
ES.12766.7	chr15	-	2090	16	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_15	293.39184264961	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTTTTATTTTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	99149835	99140699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99148627_99148811_99149742
ES.12766.9	chr15	-	3924	13	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	15	-2	intron_retention	FALSE	canonical	3	14	junction_12	241.215138528981	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTTCTTTTATTTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	99149783	99140700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99147388_99147756_99148464_99148627
ES.12767.1	chr15	+	158	1	Intergenic	novelGene_10654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99156926	99157084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99156900_99157100
ES.12768.1	chr15	+	236	1	Intergenic	novelGene_10655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTACCATGTGCATGCA	NA	False	NA	NA	False	NA	NA	NA	99181214	99181450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99181200_99181400
ES.12769.1	chr15	+	3295	24	NNC	ENSMUSG00000023007.16	novel	891	7	NA	NA	-9624	0	intron_retention	TRUE	canonical	0	0	junction_1	44.0016325526313	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99183343	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99183438_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.10	chr15	+	3698	23	NNC	ENSMUSG00000023007.16	novel	2993	23	NA	NA	-31	0	intron_retention	FALSE	canonical	3	12	junction_22	43.9034675488157	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192936	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99213168_99213363_99213451_99213603_99213782_99213967_99214164_99214341
ES.12769.101	chr15	+	2152	13	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-248	-2	intron_retention	FALSE	canonical	3	102	junction_9	29.2631736715848	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99205517	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214262_99214341
ES.12769.11	chr15	+	3513	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.9788744213741	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192937	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.12	chr15	+	3450	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.6206840561062	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192942	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99197448_99197546_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.13	chr15	+	3324	17	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-19	-2979	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.6264090049256	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCATGATGGCAGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	99192948	99209995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203288_99203315_99203421_99203540_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
ES.12769.15	chr15	+	3410	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	43.1004761187932	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192956	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193310_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.17	chr15	+	3534	27	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	51.8478229587524	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192956	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99199667_99199866_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.18	chr15	+	3104	24	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	43.9949301083238	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTCCTTTGTCCTC	NA	False	NA	37	True	TTTAAA	-18	NA	99192956	99214892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.19	chr15	+	3350	25	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-10	1	intron_retention	FALSE	canonical	3	4	junction_22	52.7442565330314	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99192957	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213477_99213603_99213782_99213967_99214164_99214341
ES.12769.2	chr15	+	3300	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.0095919472236	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192914	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.21	chr15	+	2262	19	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-10	3882	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_18	45.4269526238703	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTCAAGTGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	99192957	99208840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
ES.12769.22	chr15	+	3477	25	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	102	junction_20	28.3617504553032	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192957	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.23	chr15	+	3521	27	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	53.0668468696454	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192957	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539_99208728_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.24	chr15	+	3600	27	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.0320224568174	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192957	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99199667_99199880_99201113_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.28	chr15	+	3598	23	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-7	1	intron_retention	FALSE	canonical	3	25	junction_1	40.4210535519293	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99192960	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.29	chr15	+	3457	23	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_5	64.124813727115	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192961	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203402_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212574_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214164_99214341
ES.12769.31	chr15	+	3373	26	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	41.9613917786338	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192961	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201113_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.32	chr15	+	3533	25	NIC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-5	1	intron_retention	FALSE	canonical	3	106	junction_20	28.2295894802284	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99192962	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.33	chr15	+	3259	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_21	50.1929436995104	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192962	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.36	chr15	+	3465	24	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-4	4	intron_retention	FALSE	canonical	3	12	junction_23	42.9526049965824	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99192963	99214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214164_99214341
ES.12769.37	chr15	+	3330	26	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.7542957890994	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192963	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205609_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.38	chr15	+	3541	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	51.611730353275	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192963	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99199667_99199880_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.39	chr15	+	3490	25	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4	junction_21	44.2913334888692	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192964	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213477_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.4	chr15	+	3729	24	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	102	junction_19	28.8141820783947	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTGTCCTCTTCATG	NA	False	NA	43	True	TTTAAA	-24	NA	99192916	99214898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.40	chr15	+	3482	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	14	junction_21	42.7754959708892	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192964	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.41	chr15	+	3383	26	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.7542957890994	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATCTACAACTCCTTTG	NA	False	NA	32	True	TTTAAA	-13	NA	99192966	99214887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204399_99204537_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.43	chr15	+	3294	25	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	44.2386206335093	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192968	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.44	chr15	+	3267	25	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_21	51.267256579831	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTCCTTTGTCCTCTT	NA	False	NA	39	True	TTTAAA	-20	NA	99192968	99214894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213477_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.45	chr15	+	3303	24	NNC	ENSMUSG00000023007.16	novel	4065	24	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	45.7715623157458	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99192970	99214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202403_99203413_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.46	chr15	+	3442	24	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	12	0	intron_retention	FALSE	canonical	3	25	junction_1	40.0767222623905	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192979	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.47	chr15	+	3455	23	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	15	0	intron_retention	FALSE	canonical	3	25	junction_1	40.7947138448838	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99192982	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.48	chr15	+	3462	24	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_13	52.497186890156	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192982	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205900_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.49	chr15	+	6764	25	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	29	1	intron_retention	FALSE	non_canonical	0	0	junction_17	44.9063067829997	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTCCTTTGTCCTC	NA	False	NA	37	True	TTTAAA	-18	NA	99192996	99214892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99209027_99210237_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.5	chr15	+	3374	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-39	10	combination_of_known_junctions	FALSE	canonical	3	102	junction_21	28.1893596947501	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCATGTACTATCCACT	NA	False	NA	54	True	TTTAAA	-35	NA	99192928	99214909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.50	chr15	+	1928	19	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-29	3681	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_18	45.4269526238703	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGGATGATGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	99193090	99208639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
ES.12769.51	chr15	+	3183	25	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.8569601750758	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193098	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203969_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212574_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.52	chr15	+	3335	23	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	25	junction_1	47.2357591465275	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTACAACTCCTTTGTCC	NA	False	NA	35	True	TTTAAA	-16	NA	99193101	99214890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214262_99214345
ES.12769.53	chr15	+	4672	26	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-13	1	intron_retention	FALSE	canonical	2	5	junction_1	41.6454751443659	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99193106	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99199667_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.55	chr15	+	3439	25	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-9	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	62.3540378938419	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193110	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99193653_99193773_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204255_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.56	chr15	+	3253	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	56.6354517947902	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193111	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201113_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213477_99213603_99213782_99213967_99214030_99214123_99214262_99214345
ES.12769.60	chr15	+	3843	25	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	1	-2	intron_retention	FALSE	canonical	3	102	junction_20	28.7706145900446	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193122	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.62	chr15	+	3584	26	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_1	52.6307286668159	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99193122	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99199667_99199880_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.64	chr15	+	3406	24	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	102	junction_19	28.8797127268151	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99193122	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.66	chr15	+	3390	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	58.8134776044487	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTCCTTTGTCCTC	NA	False	NA	37	True	TTTAAA	-18	NA	99193122	99214892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99199667_99199880_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.67	chr15	+	3299	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	58.6552458849376	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193122	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99193653_99193773_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.68	chr15	+	3196	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_22	43.5266539030971	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193122	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213477_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.69	chr15	+	3152	25	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.8357341364626	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGATCTACAACTCCTT	NA	False	NA	30	True	TTTAAA	-11	NA	99193124	99214885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203397_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.7	chr15	+	3379	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	41.8124192076947	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192928	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.71	chr15	+	3068	24	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	3	0	intron_retention	FALSE	canonical	1	6	junction_23	51.0322185936842	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTACAACTCCTTTGT	NA	False	NA	33	True	TTTAAA	-14	NA	99193127	99214888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214164_99214345
ES.12769.72	chr15	+	3182	26	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	47.5514710603153	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193130	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213944_99214030_99214123_99214262_99214345
ES.12769.73	chr15	+	3424	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	9	254	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_22	47.0345234907297	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAGTGCCCCTGCAT	NA	False	NA	NA	False	AAGAAA	-18	NA	99193133	99215153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214345
ES.12769.74	chr15	+	2965	24	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	52.881327352939	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193133	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.75	chr15	+	3430	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.0482462482415	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99193140	99214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99199667_99199880_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214345
ES.12769.76	chr15	+	3662	24	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-10	4	intron_retention	FALSE	non_canonical	0	0	junction_8	54.2944085310041	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99193141	99214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204036_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.77	chr15	+	3349	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4376436669144	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTCCTTTGTCCTCTTC	NA	False	NA	40	True	TTTAAA	-21	NA	99193144	99214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99201113_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.78	chr15	+	3418	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.0893775585567	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193148	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99193653_99193773_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.79	chr15	+	3360	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.9794420901187	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTTGTCCTCTTCA	NA	False	NA	41	True	TTTAAA	-22	NA	99193149	99214896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99201113_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.8	chr15	+	3479	27	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.2594629739592	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99192930	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193155_99193653_99193773_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.80	chr15	+	3419	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.3543291642029	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99193149	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99193653_99193773_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.81	chr15	+	3276	26	FSM	ENSMUSG00000023007.16	ENSMUST00000145482.8	3308	26	30	2	30	-2	multi-exon	FALSE	canonical	3	14	junction_1	50.458442306516	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193181	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.82	chr15	+	3456	24	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	49	0	intron_retention	FALSE	canonical	3	12	junction_23	51.5796592431265	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193200	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99213168_99213360_99213451_99213603_99213782_99213967_99214164_99214341
ES.12769.83	chr15	+	3441	27	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	60	1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	51.5542455738263	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99193211	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99199667_99199880_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.84	chr15	+	3468	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	65	0	intron_retention	FALSE	non_canonical	0	0	junction_2	61.1949801862865	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193216	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99201163_99201245_99201725_99201819_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.86	chr15	+	3572	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	73	1	intron_retention	FALSE	canonical	3	4	junction_1	52.689672612382	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTCCTTTGTCCTC	NA	False	NA	37	True	TTTAAA	-18	NA	99193224	99214892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193310_99199667_99199880_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.88	chr15	+	3183	26	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	256	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.2785808654926	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193407	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99193455_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.89	chr15	+	3389	26	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	141	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4376436669144	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99193916	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99194170_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.9	chr15	+	4251	24	FSM	ENSMUSG00000023007.16	ENSMUST00000150641.8	4065	24	-186	0	-34	0	multi-exon	FALSE	canonical	3	106	junction_19	28.9761651611806	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192933	99214899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.90	chr15	+	7949	25	FSM	ENSMUSG00000023007.16	ENSMUST00000118287.9	3129	25	-4811	-9	2578	-2	multi-exon	FALSE	canonical	3	106	junction_20	24.7694578395787	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99196353	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.91	chr15	+	4764	24	NIC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-1484	-2	intron_retention	FALSE	canonical	3	102	junction_19	25.1930167057707	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99199679	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.92	chr15	+	4297	22	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-140	1	intron_retention	FALSE	canonical	3	47	junction_21	37.3747340900149	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTACAACTCCTTTGTC	NA	False	NA	34	True	TTTAAA	-15	NA	99201023	99214889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99201245_99201921_99202066_99202305_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214345
ES.12769.93	chr15	+	3497	24	NNC	ENSMUSG00000023007.16	novel	3129	25	NA	NA	-140	4	intron_retention	FALSE	non_canonical	0	0	junction_2	43.7480326319738	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCTCTTCATGTACTA	NA	False	NA	48	True	TTTAAA	-29	NA	99201023	99214903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99201245_99201921_99202066_99202303_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.95	chr15	+	3954	23	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_16	44.7258176038245	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTCCTCTTCAT	NA	False	NA	42	True	TTTAAA	-23	NA	99201162	99214897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99201245_99201921_99202066_99202305_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207917_99212458_99212574_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.96	chr15	+	3126	24	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.077479471918	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	False	NA	36	True	TTTAAA	-17	NA	99201162	99214891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203400_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ES.12769.98	chr15	+	3027	17	NNC	ENSMUSG00000023007.16	novel	3047	25	NA	NA	869	-2979	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	45.6555976168312	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCATGATGGCAGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	99202033	99209995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
ES.1277.1	chr1	+	1501	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAATACAGTCGAA	NA	False	NA	NA	False	NA	NA	NA	131073105	131074606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131073100_131074600
ES.1277.10	chr1	+	2943	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	17	2	17	-2	intron_retention	FALSE	canonical	3	546	junction_5	45.0821734931215	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCCTTTGTGTCTTAT	NA	False	NA	NA	False	AGTAAA	-22	NA	131080934	131099974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ES.1277.11	chr1	+	2133	15	FSM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	17	3	17	-3	multi-exon	FALSE	canonical	3	28	junction_14	169.094301066184	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGCCTTTGTGTCTTA	NA	False	NA	NA	False	AGTAAA	-21	NA	131080934	131099973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131099657
ES.1277.12	chr1	+	4909	13	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	17	732	17	-3	intron_retention	FALSE	canonical	3	546	junction_5	46.916814683011	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTGTTTTGCTTGCA	NA	False	NA	22	True	ATTAAA	-15	NA	131080934	131099244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ES.1277.13	chr1	+	6018	15	NNC	ENSMUSG00000026427.17	novel	3459	17	NA	NA	17	-3	intron_retention	TRUE	non_canonical	0	0	junction_14	235.7749705433	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTTCCCTGTGATG	NA	False	NA	NA	False	AATGAA	-34	NA	131080934	131108140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131098849_131106369_131106625_131106890
ES.1277.14	chr1	+	3126	13	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	17	-5	intron_retention	FALSE	canonical	3	15	junction_3	180.421477995892	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCTTTTATTTCTAAT	NA	False	NA	36	True	AATAAA	-17	NA	131080934	131101210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.15	chr1	+	2374	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	172.514255548192	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	38	True	AATAAA	-19	NA	131080934	131101212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081548_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.16	chr1	+	3109	14	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	17	0	intron_retention	FALSE	canonical	3	546	junction_5	44.6562147387449	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080934	131101215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.17	chr1	+	2942	13	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	17	0	intron_retention	FALSE	canonical	3	546	junction_5	45.989959653047	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080934	131101215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.18	chr1	+	4688	14	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	17	0	intron_retention	FALSE	canonical	3	546	junction_5	45.0979210741149	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080934	131101215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131098849_131101040
ES.1277.19	chr1	+	1978	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.374080653963	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	38	True	AATAAA	-19	NA	131080937	131101212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083450_131085925_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.2	chr1	+	1864	15	NNC	ENSMUSG00000026427.17	novel	739	3	NA	NA	-6892	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.757718209483	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	38	True	AATAAA	-19	NA	131074025	131101212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131074129_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.20	chr1	+	4914	13	NNC	ENSMUSG00000026427.17	novel	2153	15	NA	NA	23	-2	intron_retention	FALSE	canonical	3	15	junction_5	184.586700496	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGTTTTGCTTGCAT	NA	False	NA	23	True	ATTAAA	-16	NA	131080940	131099245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ES.1277.21	chr1	+	2895	16	NNC	ENSMUSG00000026427.17	novel	3459	17	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	228.929819425566	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGGTCTTCCATG	NA	False	NA	NA	False	AATGAA	-12	NA	131080951	131107730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131106369_131106625_131106890
ES.1277.22	chr1	+	4577	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	44	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	234.632495966065	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAAAGCTTTTATTTC	NA	False	NA	32	True	AATAAA	-13	NA	131080961	131101206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131097642_131097726_131098849_131101040
ES.1277.24	chr1	+	3514	16	NNC	ENSMUSG00000026427.17	novel	3465	16	NA	NA	45	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	228.596237939298	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTTCCCTGTGATG	NA	False	NA	NA	False	AATGAA	-34	NA	131080962	131108140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131106336_131106754_131106832
ES.1277.25	chr1	+	1842	14	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	62	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	182.011248758301	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAAAGCTTTTATTTC	NA	False	NA	32	True	AATAAA	-13	NA	131080979	131101206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131095856_131095978_131098673_131098849_131101040
ES.1277.28	chr1	+	6826	13	ISM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	68	3	68	-3	intron_retention	FALSE	canonical	3	546	junction_5	46.916814683011	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	38	True	AATAAA	-19	NA	131080985	131101212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856
ES.1277.29	chr1	+	4748	11	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	68	-8	intron_retention	FALSE	canonical	3	546	junction_4	42.0524672284516	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAAGCTTTTATTTCT	NA	False	NA	33	True	AATAAA	-14	NA	131080985	131101207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131081163_131081965_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131092507_131092856_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.3	chr1	+	4217	14	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_5	177.689610369138	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080911	131101215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ES.1277.30	chr1	+	4116	12	NNC	ENSMUSG00000026427.17	novel	2153	15	NA	NA	76	-5	intron_retention	FALSE	canonical	3	15	junction_5	190.70361236378	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACATGGGTGTTTTGCTTG	NA	False	NA	20	True	ATTAAA	-13	NA	131080993	131099242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131092244_131092356_131092507_131092856_131094160_131095856_131095978_131098673
ES.1277.32	chr1	+	2525	12	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	1983	5	1983	-5	intron_retention	FALSE	canonical	3	546	junction_3	42.3737795114224	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAGAGCCTTTGTGTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	131082900	131099971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ES.1277.33	chr1	+	1484	12	ISM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	2449	8	2449	-8	3prime_fragment	FALSE	canonical	3	546	junction_2	39.6984501227537	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAAGCTTTTATTTCT	NA	False	NA	33	True	AATAAA	-14	NA	131083366	131101207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.34	chr1	+	1200	10	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	-5900	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	209.644908486519	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAAAGCTTTTATTTC	NA	False	NA	32	True	AATAAA	-13	NA	131088215	131101206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095964_131098671_131098849_131101040
ES.1277.35	chr1	+	1990	6	NIC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	-2949	-7	intron_retention	FALSE	canonical	3	609	junction_3	26.5073574692009	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGCTTTTATTTCTA	NA	False	NA	34	True	AATAAA	-15	NA	131091166	131101208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.36	chr1	+	1518	3	NNC	ENSMUSG00000026427.17	novel	739	3	NA	NA	-39	-3	intron_retention	FALSE	canonical	2	2	junction_2	303.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGCCTTTGTGTCTTA	NA	False	NA	NA	False	AGTAAA	-21	NA	131094076	131099973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131094160_131095856_131095978_131098659
ES.1277.4	chr1	+	2032	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	-6	-17	-6	17	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGAATCGCTCTTCTG	NA	False	NA	58	True	AATAAA	-39	NA	131080911	131101232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.5	chr1	+	2230	14	ISM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	0	732	0	-3	5prime_fragment	FALSE	canonical	3	546	junction_5	45.0821734931215	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTGTTTTGCTTGCA	NA	False	NA	22	True	ATTAAA	-15	NA	131080917	131099244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673
ES.1277.6	chr1	+	2004	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	171.640820985485	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTATTTCTAATCT	NA	False	NA	38	True	AATAAA	-19	NA	131080929	131101212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.7	chr1	+	1892	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.073109235676	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCTTTTATTTCTAAT	NA	False	NA	36	True	AATAAA	-17	NA	131080932	131101210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098752_131101040
ES.1277.8	chr1	+	1978	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	176.212302380407	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGCTTTTATTTCTA	NA	False	NA	34	True	AATAAA	-15	NA	131080933	131101208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091264_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.1277.9	chr1	+	1932	15	ISM	ENSMUSG00000026427.17	ENSMUST00000149119.8	2504	16	17	1381	17	-7	5prime_fragment	FALSE	canonical	2	4	junction_5	174.433850978951	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGCTTTTATTTCTA	NA	False	NA	34	True	AATAAA	-15	NA	131080934	131101208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088199_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ES.12770.1	chr15	+	186	1	Intergenic	novelGene_10656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGGGAGAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	99248474	99248660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99248500_99248700
ES.12771.1	chr15	+	7746	1	Intergenic	novelGene_10657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGCTTTACACAGCCAT	21	False	NA	NA	False	NA	NA	NA	99249619	99257365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99249600_99257400
ES.12772.1	chr15	-	5614	27	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	15	15	intron_retention	FALSE	canonical	2	4	junction_20	12.4650992063783	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTCTCTTTGTCAGA	NA	False	NA	-2	True	CATAAA	-32	NA	99268315	99215090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.10	chr15	-	4566	27	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	-4	0	intron_retention	FALSE	canonical	2	4	junction_20	12.4976329119704	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGCACCAAGCTGT	NA	False	NA	-17	True	CATAAA	-17	NA	99268334	99215105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.11	chr15	-	4320	27	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	76	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	14.868506488787	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGCACCAAGCTGT	NA	False	NA	-17	True	CATAAA	-17	NA	99268254	99215105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.14	chr15	-	6601	27	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	-14	-3	intron_retention	FALSE	non_canonical	0	0	junction_17	14.2956938938033	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	False	NA	-20	True	CATAAA	-14	NA	99268377	99215108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99224771_99224817_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.16	chr15	-	5389	23	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	69	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	11.8436787896636	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	False	NA	-20	True	CATAAA	-14	NA	99268261	99215108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216254_99216798_99216899_99217011_99217054_99218355_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99220279_99220483_99220609_99220692_99220762_99221200_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.18	chr15	-	4121	20	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	-2670	-3	intron_retention	FALSE	canonical	3	33	junction_12	7.91716113535738	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	False	NA	-20	True	CATAAA	-14	NA	99226204	99215108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938
ES.12772.19	chr15	-	5513	4	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	1818	-3	intron_retention	FALSE	canonical	3	42	junction_1	5.31245915016974	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	False	NA	-20	True	CATAAA	-14	NA	99221716	99215108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99217136_99217442_99217968_99218233_99218395_99218916
ES.12772.2	chr15	-	4536	28	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	-15	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	12.2696051230895	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTCTCTTTGTCAGA	NA	False	NA	-2	True	CATAAA	-32	NA	99268378	99215090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.20	chr15	-	5969	28	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	35	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	17.8418598131254	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	False	NA	-20	True	CATAAA	-14	NA	99268295	99215108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217493_99217582_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99224771_99224817_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.21	chr15	-	3813	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	34	576	1	-576	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGGCAGGCCCACTGGC	NA	False	NA	NA	False	AGTAAA	-14	NA	99268329	99215681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.3	chr15	-	4461	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	-25	-13	-25	13	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTCTCTTTGTCA	NA	False	NA	-4	True	CATAAA	-30	NA	99268388	99215092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.5	chr15	-	6400	25	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	86	3	intron_retention	FALSE	canonical	0	0	junction_18	12.7156399760295	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	False	NA	-14	True	CATAAA	-20	NA	99268244	99215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216899_99217011_99217136_99217442_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226042_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.6	chr15	-	4598	28	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.5865751834689	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	False	NA	-14	True	CATAAA	-20	NA	99268329	99215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222498_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.7	chr15	-	5897	26	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	49	3	intron_retention	FALSE	canonical	2	4	junction_19	12.6867489925512	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	False	NA	-14	True	CATAAA	-20	NA	99268281	99215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99220279_99220483_99220609_99220692_99220762_99221200_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.8	chr15	-	4497	26	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	86	3	intron_retention	FALSE	canonical	0	0	junction_12	11.4069452527835	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	False	NA	-14	True	CATAAA	-20	NA	99268244	99215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99220279_99220483_99220609_99220692_99220762_99221339_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12772.9	chr15	-	4214	27	NNC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	82	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.3508464872155	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGCACCAAGCTGTC	NA	False	NA	-16	True	CATAAA	-18	NA	99268248	99215104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220170_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ES.12773.1	chr15	-	249	1	Intergenic	novelGene_10658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTACAATGATGAGTCCA	3313	False	NA	NA	False	NA	NA	NA	99283886	99283637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99283600_99283900
ES.12774.1	chr15	-	178	1	Intergenic	novelGene_10659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTTTTTATCTTTTA	2894	False	NA	0	True	NA	NA	NA	99284305	99284127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99284100_99284300
ES.12775.1	chr15	+	2386	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	66	0	-38	0	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290828	99307930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.11	chr15	+	2436	10	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	584.194940405223	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99290868	99307928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302202_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.13	chr15	+	2596	12	NIC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	804.164593982399	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290868	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99290922_99291575_99291612_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.15	chr15	+	2327	9	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	614.447312631441	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290868	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302420_99303714_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.18	chr15	+	2381	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	2	-1512	2	-1	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290868	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.19	chr15	+	1201	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	2	-55	2	55	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTCCTGGGTTCTTCC	NA	False	NA	28	True	AATATA	-15	NA	99290868	99306570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.2	chr15	+	2590	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	-27	-1415	-27	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290839	99307930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.20	chr15	+	2287	10	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_7	578.563376171456	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99290868	99307928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304514_99304559_99305148_99305225_99306355
ES.12775.21	chr15	+	2232	9	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	614.239163518576	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290868	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303864_99304514_99304559_99305148_99305225_99306355
ES.12775.22	chr15	+	2503	12	NNC	ENSMUSG00000023010.16	novel	871	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	821.180776545941	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99290868	99307928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99291575_99291612_99298998_99299122_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.23	chr15	+	2361	11	NNC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	2	30119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	561.48674071611	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAGAGTAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	99290868	99338049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355_99307922_99338025
ES.12775.24	chr15	+	3474	9	ISM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	108	1	4	-1	intron_retention	FALSE	canonical	3	1742	junction_5	81.1017878964453	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290870	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148
ES.12775.25	chr15	+	1112	10	NNC	ENSMUSG00000023010.16	novel	944	10	NA	NA	11	8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	587.59549788592	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGTGGTTTTCTCTATT	NA	False	NA	15	True	AATGAA	-21	NA	99291110	99306499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99291361_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.26	chr15	+	2446	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	11	-1513	11	-1	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99291110	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.27	chr15	+	2481	11	NIC	ENSMUSG00000023010.16	novel	944	10	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	738.083030559571	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99291111	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99291265_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.28	chr15	+	2530	10	NNC	ENSMUSG00000023010.16	novel	944	10	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	587.59549788592	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGCTGGTGTCTCAG	NA	False	NA	7	True	AATAAA	-12	NA	99291115	99307922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99291361_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.29	chr15	+	1078	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	18	-152	18	53	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGTCCTGGGTTCTT	NA	False	NA	26	True	AATATA	-13	NA	99291117	99306568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.3	chr15	+	1001	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	97	1354	-7	-58	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTTCTTCCCCGTCC	NA	False	NA	34	True	AATATA	-21	NA	99290859	99306576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.30	chr15	+	2753	10	ISM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	281	-1509	48	-4	3prime_fragment	FALSE	canonical	3	24	junction_1	583.005897520094	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTGTCTCAGTGTT	NA	False	NA	11	True	AATAAA	-16	NA	99291147	99307926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.31	chr15	+	3870	9	ISM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	298	-1512	65	-1	intron_retention	FALSE	canonical	3	24	junction_1	616.645359992273	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99291164	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148
ES.12775.32	chr15	+	2735	11	NNC	ENSMUSG00000023010.16	novel	944	10	NA	NA	77	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	719.640160080022	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGCTGGTGTCTCAG	NA	False	NA	7	True	AATAAA	-12	NA	99291176	99307922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99291265_99297390_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.33	chr15	+	3514	9	NNC	ENSMUSG00000023010.16	novel	689	6	NA	NA	-3181	-2	intron_retention	FALSE	canonical	0	0	junction_1	624.529823146981	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	539	False	NA	13	True	AATAAA	-18	NA	99295784	99307928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99295877_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148
ES.12775.34	chr15	+	1717	10	ISM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	6100	-53	-1999	53	3prime_fragment	FALSE	canonical	3	119	junction_1	553.986963344405	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCGTGTCCTGGGTTCTT	1721	False	NA	26	True	AATATA	-13	NA	99296966	99306568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.36	chr15	+	2474	11	NNC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	-1268	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	742.004959552158	994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGCTGGTGTCTCAG	2452	False	NA	7	True	AATAAA	-12	NA	99297697	99307922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99297753_99297941_99298076_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.37	chr15	+	3817	6	FSM	ENSMUSG00000023010.16	ENSMUST00000231147.2	689	6	-669	-2459	-669	-8	multi-exon	FALSE	canonical	3	1742	junction_2	72.5964186444483	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGCTGGTGTCTCAG	6455	False	NA	7	True	AATAAA	-12	NA	99301700	99307922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148
ES.12775.38	chr15	+	3246	2	NIC	ENSMUSG00000023010.16	novel	852	4	NA	NA	339	-1	intron_retention	FALSE	canonical	3	1807	junction_1	0	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	8848	False	NA	14	True	AATAAA	-19	NA	99304093	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99304559_99305148
ES.12775.39	chr15	+	177	1	Intergenic	novelGene_10661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACAGCTGGTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	99317900	99318077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99317900_99318100
ES.12775.4	chr15	+	1914	5	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	741.122923339981	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTCTCAGTGTTAAA	NA	False	NA	14	True	AATAAA	-19	NA	99290860	99307929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99304439_99304559_99305148_99305225_99306355
ES.12775.5	chr15	+	2342	10	NNC	ENSMUSG00000023010.16	novel	2452	10	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	589.988888784262	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGTGTCTCAGTGTTA	NA	False	NA	12	True	AATAAA	-17	NA	99290862	99307927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305218_99306355
ES.12775.6	chr15	+	2495	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161778.8	901	11	-36	-1558	0	0	multi-exon	FALSE	canonical	3	5	junction_1	735.13686480818	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99297941_99298089_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.7	chr15	+	1009	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	0	-138	0	40	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGAGTTTGGCTTCGT	NA	False	NA	13	True	NA	NA	NA	99290866	99306555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.8	chr15	+	1328	11	NNC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	719.435257684804	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATAGTTTGGAGTTTG	NA	False	NA	6	True	NA	NA	NA	99290866	99306548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99290922_99297390_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ES.12775.9	chr15	+	2691	9	NIC	ENSMUSG00000023010.16	novel	1148	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1506	junction_8	141.313481310171	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTCTCAGTGTTAA	NA	False	NA	13	True	AATAAA	-18	NA	99290866	99307928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304559_99305148_99305225_99306355
ES.12776.1	chr15	+	176	1	Intergenic	novelGene_10662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	99342393	99342569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99342400_99342600
ES.12777.1	chr15	+	188	1	Intergenic	novelGene_10663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATGCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99348136	99348324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99348100_99348300
ES.12778.1	chr15	-	177	1	Intergenic	novelGene_10660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATGTCCAT	NA	False	NA	NA	False	NA	NA	NA	99311875	99311698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99311700_99311900
ES.12779.1	chr15	-	4913	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	-48	-12	-48	12	multi-exon	TRUE	canonical	3	12	junction_6	8.3877390676312	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCCCCCTTTGTGCTTG	NA	False	NA	11	True	AATAAA	-37	NA	99355677	99319903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ES.12779.2	chr15	-	4830	12	NIC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-37	1	intron_retention	FALSE	canonical	0	0	junction_11	10.9875963125368	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355666	99319914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99355512
ES.12779.3	chr15	-	5062	12	NIC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-17	1	intron_retention	FALSE	canonical	3	12	junction_5	8.75752333003076	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355610	99319914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ES.12779.4	chr15	-	4873	13	NNC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-37	1	intron_retention	FALSE	canonical	2	3	junction_11	9.992705672973	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTGGCAGCCCCCC	NA	False	NA	0	True	AATAAA	-26	NA	99355666	99319914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333925_99333969_99355512
ES.12779.5	chr15	-	3749	6	NNC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-3404	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4027775099111	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGTGTGGCAGCCCCC	NA	False	NA	-1	True	AATAAA	-25	NA	99325822	99319915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99320643_99321077_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433
ES.12779.7	chr15	-	4742	13	NNC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_2	10.7030629053349	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTTGTGTGGCAGCCC	NA	False	NA	-3	True	AATAAA	-23	NA	99355608	99319917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99320790_99321016_99321160_99321334_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ES.12779.8	chr15	-	4997	13	NNC	ENSMUSG00000023009.15	novel	4853	13	NA	NA	-41	-2	intron_retention	TRUE	canonical	0	0	junction_1	10.7225100709779	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTTGTGTGGCAGCCC	NA	False	NA	-3	True	AATAAA	-23	NA	99355670	99319917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99320790_99320911_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ES.1278.1	chr1	-	3090	5	FSM	ENSMUSG00000026430.17	ENSMUST00000068564.15	3076	5	-22	8	-22	-8	multi-exon	FALSE	canonical	0	0	junction_3	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAGTCACGATGGAA	8529	False	NA	NA	False	AATAAA	-11	NA	131127894	131104154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131106415_131108289_131108406_131108890_131109189_131109880_131109992_131127589
ES.12780.1	chr15	-	179	1	Intergenic	novelGene_10664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGCAATTAGTGCT	5167	False	NA	NA	False	NA	NA	NA	99365291	99365112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99365100_99365300
ES.12781.1	chr15	-	4637	1	FSM	ENSMUSG00000037525.6	ENSMUST00000229827.2	4628	1	-7	-2	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	0	True	ATTAAA	-19	NA	99372596	99367959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99368000_99372600
ES.12781.2	chr15	-	1241	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	14	21	-8	-19	multi-exon	FALSE	canonical	3	84	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAACGAAAA	NA	False	NA	-21	True	NA	NA	NA	99372597	99367980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99368961_99372336
ES.12782.1	chr15	-	144	1	Intergenic	novelGene_10665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	99389703	99389559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99389600_99389700
ES.12783.1	chr15	-	717	8	ISM	ENSMUSG00000023011.9	ENSMUST00000231171.2	4168	12	7311	3032	7280	-250	3prime_fragment	FALSE	canonical	0	0	junction_1	1.39970842444753	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGTGAGCAGCCGCTT	6259	False	NA	NA	False	CATAAA	-12	NA	99418282	99397928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99398179_99408462_99408517_99410376_99410473_99410661_99410750_99411229_99411268_99411797_99411838_99412280_99412332_99418182
ES.12784.1	chr15	+	1578	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	211	8	144	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGCCTTCATCTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	99488873	99492702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
ES.12785.1	chr15	+	181	1	Intergenic	novelGene_10666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	99496554	99496735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99496600_99496700
ES.12786.1	chr15	+	2375	4	FSM	ENSMUSG00000043144.7	ENSMUST00000230075.2	1427	4	48	-996	48	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTGTAATTATTGGGT	NA	False	NA	NA	False	AATAAA	-17	NA	99499328	99503358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99499682_99500469_99500629_99500849_99500931_99501576
ES.12787.1	chr15	+	178	1	Antisense	novelGene_ENSMUSG00000023015.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCACATACTAAC	NA	False	NA	NA	False	NA	NA	NA	99533055	99533233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99533100_99533200
ES.12788.1	chr15	-	3022	18	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-40	7602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.075638004279	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACCAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	99549577	99510774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99510823_99518376_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.10	chr15	-	5635	14	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	453	junction_13	71.5341603338891	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549479	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99524439_99526514_99526680_99528989_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.12	chr15	-	3172	13	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_9	197.765784592673	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549487	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.13	chr15	-	3040	17	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-2364	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	171.552060247028	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99551901	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99551645
ES.12788.14	chr15	-	2939	17	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	170.527387371501	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549556	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99549387
ES.12788.15	chr15	-	2937	18	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	229.200370175489	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549515	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524169_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.16	chr15	-	3031	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	241.967125794803	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549546	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99541302_99541405_99549387
ES.12788.2	chr15	-	11294	5	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	824	220	intron_retention	FALSE	canonical	3	672	junction_3	21.0876148485314	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAATATA	590	False	NA	NA	False	NA	NA	NA	99535325	99518156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99524439_99526514_99530079_99530595_99530677_99532122_99532177_99534012
ES.12788.21	chr15	-	2836	14	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	32	-2	intron_retention	FALSE	canonical	3	663	junction_5	26.0645534537916	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99537666	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494
ES.12788.22	chr15	-	4943	12	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-3135	-2	intron_retention	FALSE	canonical	1	10	junction_9	197.127764081828	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99540833	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99535518_99535656_99537494_99537701_99540763
ES.12788.23	chr15	-	3062	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	224.791545113079	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549551	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99541273_99541405_99549387
ES.12788.24	chr15	-	2915	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	178.39037249807	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549504	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537718_99540763_99540853_99549387
ES.12788.27	chr15	-	5015	14	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	453	junction_13	72.438180131947	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549524	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.28	chr15	-	4769	16	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	271.888817145702	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549474	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529959_99530079_99530595_99530677_99532122_99532177_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.3	chr15	-	2976	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	-39	-4	-39	3	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGTTTTCTTGTCCTT	NA	False	NA	3	True	AATAAA	-23	NA	99549576	99518373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.31	chr15	-	2958	17	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	280.345991588965	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549491	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532232_99535518_99535656_99537494_99537687_99540763_99540853_99541302_99541405_99549387
ES.12788.32	chr15	-	4363	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	234.852047840763	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549529	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524067_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99537100_99537494_99537701_99540763_99540853_99549387
ES.12788.33	chr15	-	6257	9	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	500	-2	intron_retention	FALSE	canonical	3	665	junction_4	25.9804614085278	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	266	False	NA	-3	True	AATAAA	-17	NA	99535649	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99532177_99534012_99534083_99535518
ES.12788.35	chr15	-	2847	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	10	junction_12	178.436493527031	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549523	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.36	chr15	-	3427	16	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	35	junction_13	234.889155891786	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549504	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99541273_99541405_99549387
ES.12788.4	chr15	-	3129	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	-77	0	-64	0	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549601	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.40	chr15	-	4728	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	453	junction_15	68.1033201996953	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGATGTTGGTTTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	99549495	99518379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99537701_99540763_99540853_99549387
ES.12788.42	chr15	-	3160	19	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	260.721340292563	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGTTGGTTTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	99549530	99518380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99536804_99536911_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.43	chr15	-	4976	17	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	6	-3	intron_retention	FALSE	canonical	2	3	junction_12	232.690102053676	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGTTGGTTTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	99549487	99518380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535392_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.44	chr15	-	2766	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	10	junction_12	232.286279309725	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATGTTGGTTTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	99549457	99518380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99535518_99535656_99537494_99537687_99540763_99540853_99549387
ES.12788.46	chr15	-	5843	13	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	10	-4	intron_retention	FALSE	canonical	3	453	junction_12	73.5418909345022	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGATGTTGGTTTTC	NA	False	NA	-5	True	AATAAA	-15	NA	99549514	99518381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99524439_99526514_99526680_99528989_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.47	chr15	-	5147	14	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	453	junction_13	71.8402237710831	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGATGTTGGTTTTC	NA	False	NA	-5	True	AATAAA	-15	NA	99549504	99518381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.49	chr15	-	4300	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	-5	intron_retention	FALSE	canonical	3	453	junction_15	68.2226420544447	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAAGTGATGTTGGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	99549463	99518382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.5	chr15	-	3058	17	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	228.394660825839	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549549	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535392_99535656_99537494_99537687_99540763_99540853_99549387
ES.12788.50	chr15	-	4160	14	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	7	-5	intron_retention	FALSE	canonical	3	453	junction_13	69.865127887055	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAAGTGATGTTGGTTTT	NA	False	NA	-6	True	AATAAA	-14	NA	99549517	99518382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.51	chr15	-	2108	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-15	-776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	177.753241443722	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTTGCATAGCTCC	NA	False	NA	-4	True	AATAAA	-19	NA	99549508	99519153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535647_99537505_99537701_99540763_99540853_99549387
ES.12788.52	chr15	-	4404	14	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-1	-777	intron_retention	FALSE	canonical	3	453	junction_13	71.8402237710831	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549534	99519154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.53	chr15	-	3916	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	5	-777	intron_retention	FALSE	canonical	3	453	junction_15	68.2802720817335	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549458	99519154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.54	chr15	-	2109	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-11	-778	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	222.936711520893	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549504	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535647_99537494_99537701_99540763_99540849_99549387
ES.12788.56	chr15	-	2272	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	1	779	1	-778	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549523	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ES.12788.57	chr15	-	2164	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	-9	778	-9	-778	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549546	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.59	chr15	-	2547	15	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	7	-778	intron_retention	FALSE	canonical	3	453	junction_14	69.2698435431306	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549517	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.6	chr15	-	3034	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549535	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
ES.12788.60	chr15	-	1702	14	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	493	-778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	189.23183239226	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	259	False	NA	-6	True	AATAAA	-17	NA	99535656	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530604_99530677_99532122_99532177_99534012_99534083_99535518
ES.12788.62	chr15	-	2108	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-11	-778	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	170.527387371501	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549504	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99549387
ES.12788.63	chr15	-	1996	16	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	3	-778	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	177.098917745611	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99549467	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99549387
ES.12788.64	chr15	-	2272	18	NNC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-2244	-778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	203.254336385514	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGTTGCATAGCT	NA	False	NA	-6	True	AATAAA	-17	NA	99551781	99519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99551645
ES.12788.65	chr15	-	6302	12	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	9	-779	intron_retention	FALSE	canonical	3	453	junction_11	77.6206073004196	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGAGTGTTGCATAGC	NA	False	NA	-7	True	AATAAA	-16	NA	99549515	99519156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99537701_99540763_99540853_99549387
ES.12788.67	chr15	-	2655	15	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	9	-780	intron_retention	FALSE	canonical	2	3	junction_11	239.417969847115	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTGAGTGTTGCATAG	NA	False	NA	-8	True	AATAAA	-15	NA	99549515	99519157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535392_99535656_99537494_99537687_99540763_99540853_99549387
ES.12788.68	chr15	-	2230	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-11	-783	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	244.196627903796	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTTGAGTGTTGCA	NA	False	NA	-11	True	AATAAA	-12	NA	99549504	99519160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540849_99541273_99541405_99549387
ES.12788.69	chr15	-	2217	18	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-9	-783	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTTGAGTGTTGCA	NA	False	NA	-11	True	AATAAA	-12	NA	99549502	99519160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
ES.12788.71	chr15	-	4120	15	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	2	-784	intron_retention	FALSE	canonical	3	453	junction_14	69.968980007324	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGAGTTTGAGTGTTGC	NA	False	NA	-12	True	AATAAA	-11	NA	99549491	99519161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.72	chr15	-	2021	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-9	-784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	178.39037249807	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGAGTTTGAGTGTTGC	NA	False	NA	-12	True	AATAAA	-11	NA	99549479	99519161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540833_99540853_99549387
ES.12788.73	chr15	-	2575	15	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	5	-786	intron_retention	FALSE	canonical	0	0	junction_13	188.316169225685	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGAGAGTTTGAGTGTT	NA	False	NA	-14	True	AATAAA	-9	NA	99549458	99519163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537796_99540763_99540853_99549387
ES.12788.74	chr15	-	2094	17	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	-5	-789	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	177.731011644001	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCGTATGAGAGTTTGAGT	NA	False	NA	-17	True	AATAAA	-6	NA	99549475	99519166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530091_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ES.12788.75	chr15	-	1789	12	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	288	combination_of_known_junctions	FALSE	canonical	3	57	junction_11	185.527169380963	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGACTTCGTAGGACT	NA	False	NA	NA	False	ATTAAA	-3	NA	99549463	99523692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99549387
ES.12788.76	chr15	-	5403	7	NIC	ENSMUSG00000023015.15	novel	4475	8	NA	NA	1	32	intron_retention	FALSE	canonical	3	57	junction_6	231.625895692937	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCATGGTGGCACACG	NA	False	NA	NA	False	TTTAAA	-43	NA	99549523	99526406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99526680_99528989_99530079_99530595_99530677_99532122_99535656_99537494_99537701_99540763_99540849_99549387
ES.12788.77	chr15	-	5054	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171017.8	1220	7	1020	-136	1020	30	intron_retention	FALSE	canonical	3	665	junction_1	29.4089933334837	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGCATGGTGGCACA	786	False	NA	NA	False	TTTAAA	-41	NA	99535129	99526408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99526680_99528989_99529121_99529960_99530079_99530595
ES.12788.78	chr15	-	3201	10	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	8	junction_8	256.855101584291	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-11	NA	99549498	99526438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99541273_99541405_99549387
ES.12788.79	chr15	-	1850	1	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	2397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	7627	False	NA	NA	False	TTTAAA	-11	NA	99528288	99526438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99526400_99528300
ES.12788.8	chr15	-	6763	14	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	10	0	intron_retention	FALSE	canonical	3	57	junction_13	173.545894548943	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549514	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99537701_99540763_99540849_99549387
ES.12788.80	chr15	-	137	1	Intergenic	novelGene_10667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	99541784	99541647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99541600_99541800
ES.12788.81	chr15	-	2735	1	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-5	-9084	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99549498	99546763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99546800_99549500
ES.12788.9	chr15	-	9749	10	NIC	ENSMUSG00000023015.15	novel	3052	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	453	junction_9	80.1526321741491	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549502	99518376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99519346_99520099_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99537701_99540763_99540853_99549387
ES.12789.1	chr15	+	178	1	Intergenic	novelGene_10668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGACAATCCACATTC	NA	False	NA	NA	False	NA	NA	NA	99557217	99557395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99557200_99557400
ES.1279.1	chr1	-	178	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATTAAAAGGCAC	9139	False	NA	NA	False	NA	NA	NA	131130178	131130000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131130000_131130200
ES.12790.1	chr15	+	222	1	Intergenic	novelGene_10669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTTACCCAACTCCC	NA	False	NA	NA	False	NA	NA	NA	99566058	99566280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99566100_99566300
ES.12791.1	chr15	+	2316	13	NNC	ENSMUSG00000023017.11	novel	4114	12	NA	NA	-28	208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.35410196624968	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	99568220	99597227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99568349_99568392_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ES.12791.2	chr15	+	3353	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	-26	787	-26	-787	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGCCTCTTTCTGGC	NA	False	NA	NA	False	CATAAA	-17	NA	99568222	99598222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ES.12791.3	chr15	+	3879	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	237	-2	237	0	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCAGTGTTGGTTTTCTG	NA	False	NA	4	True	AATAAA	-17	NA	99568485	99599011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ES.12792.1	chr15	+	3358	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	-36	-15	-36	15	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGTCACTGTGGGTGCC	7505	False	NA	41	True	AATAAA	-32	NA	99599973	99611887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12792.2	chr15	+	4269	13	NNC	ENSMUSG00000023018.6	novel	3307	13	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.9657787670494	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCTGTCTGGAGGGGT	7524	False	NA	28	True	AATAAA	-19	NA	99599992	99611874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99603190_99603419_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12792.3	chr15	+	3858	12	NIC	ENSMUSG00000023018.6	novel	3307	13	NA	NA	55	-1	combination_of_known_junctions	FALSE	canonical	3	247	junction_11	26.0853652646793	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCCTGCTGTCTGGAGG	7596	False	NA	25	True	AATAAA	-16	NA	99600064	99611871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12792.4	chr15	+	3126	12	NIC	ENSMUSG00000023018.6	novel	3307	13	NA	NA	58	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	85.5559359823629	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	7599	False	NA	26	True	AATAAA	-17	NA	99600067	99611872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99610039_99610142_99610252
ES.12792.5	chr15	+	3057	12	NNC	ENSMUSG00000023018.6	novel	3307	13	NA	NA	66	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.2305371486306	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCCCTGCTGTCTGGA	7607	False	NA	23	True	AATAAA	-14	NA	99600075	99611869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99600380_99601464_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12792.6	chr15	+	4077	12	NIC	ENSMUSG00000023018.6	novel	3307	13	NA	NA	7	-4	intron_retention	FALSE	canonical	3	247	junction_11	26.0009535743761	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTCCCTGCTGTCTGG	7710	False	NA	22	True	AATAAA	-13	NA	99600178	99611868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99610142_99610252
ES.12792.8	chr15	+	3036	13	NIC	ENSMUSG00000023018.6	novel	810	7	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	80.2905747201307	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCCTGCTGTCTGGAGG	7999	False	NA	25	True	AATAAA	-16	NA	99600467	99611871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99600568_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12792.9	chr15	+	3004	13	NNC	ENSMUSG00000023018.6	novel	810	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	80.8161064117516	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGCTGTCTGGAGGGG	8026	False	NA	27	True	AATAAA	-18	NA	99600494	99611873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99600561_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ES.12793.1	chr15	-	1715	1	Antisense	novelGene_ENSMUSG00000023017.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99572089	99570374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_99570400_99572100
ES.12794.1	chr15	-	207	1	Intergenic	novelGene_10670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGAATGTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	99580050	99579843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99579800_99580000
ES.12795.1	chr15	-	115	1	Intergenic	novelGene_10671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAACAACAAAAAAAA	10008	False	NA	NA	False	NA	NA	NA	99580868	99580753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99580800_99580900
ES.12796.1	chr15	-	4088	1	Genic_Genomic	ENSMUSG00000091604.3	novel	NA	NA	NA	NA	2997	3770	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTACTTTTTTAGTGTCT	1212	False	NA	NA	False	AATAAA	-14	NA	99600374	99596286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_99596300_99600400
ES.12797.1	chr15	-	380	1	FSM	ENSMUSG00000115938.2	ENSMUST00000230504.2	252	1	-33	-95	-33	95	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGCTTCAATTTACTGA	NA	False	NA	NA	False	NA	NA	NA	99604727	99604347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99604300_99604700
ES.12798.1	chr15	-	283	1	Intergenic	novelGene_10672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTAAATTCCCAGTGATA	NA	False	NA	NA	False	NA	NA	NA	99605080	99604797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99604800_99605100
ES.12799.1	chr15	+	2806	8	FSM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	58	-3	-6	3	multi-exon	FALSE	canonical	0	0	junction_2	1.1780301787479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGAGTTGGGGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	99615453	99622889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99615530_99616032_99616211_99617014_99617156_99617976_99618116_99618446_99618560_99619815_99620050_99620336_99620444_99621071
ES.12799.2	chr15	+	1578	8	FSM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	70	1213	6	0	multi-exon	FALSE	canonical	0	0	junction_2	1.1780301787479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACTCTAACTTCTCC	NA	False	NA	NA	False	AATACA	-13	NA	99615465	99621673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99615530_99616032_99616211_99617014_99617156_99617976_99618116_99618446_99618560_99619815_99620050_99620336_99620444_99621071
ES.12799.3	chr15	+	2288	3	ISM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	4287	1	1806	-1	3prime_fragment	FALSE	canonical	2	2	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGAAGAGTTGGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	99619682	99622885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99620050_99620336_99620444_99621071
ES.128.1	chr1	-	9989	5	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-3	2414	intron_retention	FALSE	canonical	3	2151	junction_3	168.877729437602	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAATAATTGTTACATT	NA	False	NA	NA	False	NA	NA	NA	13730773	13691139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.10	chr1	-	3429	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	1	-1515	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730769	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.12	chr1	-	2995	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	76	-1515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1083.28374559456	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730694	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723084_13730552
ES.128.13	chr1	-	3006	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	22	-1515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	896.466164076109	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730748	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697174_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.14	chr1	-	2789	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	46	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_5	883.707609387228	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730724	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13721088_13721109_13730552
ES.128.15	chr1	-	2847	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-2	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730772	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
ES.128.16	chr1	-	1483	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-18	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	892.793633614299	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730788	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13695611_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.17	chr1	-	1236	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	66	-1528	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	1073.87704993046	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAAAAACTGTTTC	NA	False	NA	NA	False	NA	NA	NA	13730704	13695081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13695387_13695536_13695611_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.19	chr1	-	6230	3	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-3324	-1532	intron_retention	FALSE	canonical	3	2230	junction_1	197	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13711959	13695085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697662_13700288_13700438_13708454
ES.128.2	chr1	-	4461	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	22	11	22	-11	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAAATCATCCTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	13730748	13693564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.20	chr1	-	5918	1	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	7632	-1532	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	760	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13701003	13695085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13695100_13701000
ES.128.23	chr1	-	7796	4	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	16794	1532	-5341	-1532	3prime_fragment	FALSE	canonical	3	2230	junction_2	161.742593854144	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	13713976	13695085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454
ES.128.24	chr1	-	2994	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	27	-1533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1181.12219209236	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	13730743	13695086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13697751_13697946_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
ES.128.26	chr1	-	2606	5	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	27	-1533	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	1019.55955564155	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	13730743	13695086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697129_13697579_13697662_13717608_13717736_13720944_13721109_13730552
ES.128.27	chr1	-	2266	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	138	2090	138	-2090	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTTTCTGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	13730632	13695643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.28	chr1	-	1934	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	-3	2563	-3	-2563	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTGTATGAATATTT	NA	False	NA	35	True	TTTAAA	-40	NA	13730773	13696116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.3	chr1	-	2058	1	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	33788	1371	11653	-1371	mono-exon	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACTGGGACCTTTAC	NA	False	NA	NA	False	AATAAA	-21	NA	13696982	13694924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13694900_13697000
ES.128.30	chr1	-	1821	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	27	-2564	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	968.155689959007	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTGTATGAATATT	NA	False	NA	34	True	TTTAAA	-39	NA	13730743	13696117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697129_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.31	chr1	-	4955	5	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	53	-2564	intron_retention	FALSE	canonical	3	2151	junction_3	168.877729437602	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTGTATGAATATT	NA	False	NA	34	True	TTTAAA	-39	NA	13730717	13696117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.32	chr1	-	2373	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	8	-2564	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTGTATGAATATT	NA	False	NA	34	True	TTTAAA	-39	NA	13730762	13696117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.33	chr1	-	1690	6	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	88	-2565	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	984.209449253562	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATGTGTATGAATAT	NA	False	NA	33	True	TTTAAA	-38	NA	13730682	13696118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717749_13730552
ES.128.34	chr1	-	1964	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-169	-2565	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATGTGTATGAATAT	NA	False	NA	33	True	TTTAAA	-38	NA	13730939	13696118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
ES.128.35	chr1	-	4099	2	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	5786	-2570	intron_retention	FALSE	canonical	3	2230	junction_1	0	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTTATGTGTATG	NA	False	NA	28	True	AATATA	-43	NA	13702849	13696123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697662_13700288
ES.128.37	chr1	-	1897	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	27	-2589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1083.28374559456	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAGTAATTCTTAAA	NA	False	NA	9	True	AATATA	-24	NA	13730743	13696142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723145_13730686
ES.128.38	chr1	-	2044	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	26	-2589	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	894.629842759314	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAGTAATTCTTAAA	NA	False	NA	9	True	AATATA	-24	NA	13730744	13696142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697290_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.4	chr1	-	3182	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	-203	1515	-203	-1515	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730973	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.40	chr1	-	4378	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	53	-2690	intron_retention	FALSE	canonical	3	2151	junction_4	152.774867042979	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGCTATGTTTATTTT	NA	False	NA	-12	True	NA	NA	NA	13730717	13696243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697129_13697579_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.41	chr1	-	1790	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	12	2692	12	-2692	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTATGCTATGTTTATT	NA	False	NA	-14	True	NA	NA	NA	13730758	13696245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.42	chr1	-	1235	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	26	3233	26	-3233	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAATACTTTAGAGTTTG	NA	False	NA	NA	False	AGTAAA	-40	NA	13730744	13696786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.43	chr1	-	1242	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	-164	3416	-164	3249	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGTAATCCGTGATAA	NA	False	NA	1	True	ATTAAA	-26	NA	13730934	13696969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.44	chr1	-	4129	5	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	21	3243	intron_retention	FALSE	canonical	3	2151	junction_3	168.877729437602	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATACTTGTAATCCG	NA	False	NA	-5	True	ATTAAA	-20	NA	13730749	13696975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.45	chr1	-	6663	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	32	3240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	898.061013146286	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCTTGATACTTGTAAT	NA	False	NA	-8	True	ATTAAA	-17	NA	13730738	13696978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13712856_13716204_13717736_13720944_13721109_13730552
ES.128.46	chr1	-	3697	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-2	3239	intron_retention	FALSE	canonical	3	2151	junction_4	152.774867042979	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCCTTGATACTTGTAA	NA	False	NA	-9	True	ATTAAA	-16	NA	13730772	13696979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697129_13697579_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.47	chr1	-	1166	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	52	3236	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	1081.48861882734	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730718	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723145_13730552
ES.128.48	chr1	-	1195	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	35	3236	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	894.629842759314	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730735	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697290_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.49	chr1	-	1098	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	59	3236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1083.28374559456	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730711	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723084_13730552
ES.128.5	chr1	-	3106	8	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	26	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	1081.48861882734	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730744	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723145_13730552
ES.128.50	chr1	-	3085	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	33	3236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	911.568916148905	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730737	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13699715_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.51	chr1	-	913	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	8	3236	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_5	883.707609387228	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730762	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13721088_13721109_13730552
ES.128.53	chr1	-	1163	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-232	3236	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13731002	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
ES.128.54	chr1	-	1254	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-7	3236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	896.466164076109	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730777	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697307_13697575_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.55	chr1	-	1489	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	27	3236	intron_retention	FALSE	canonical	3	2151	junction_4	166.606842596575	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730743	13696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.56	chr1	-	1651	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	12	3230	intron_retention	FALSE	canonical	3	8	junction_6	1119.26265411158	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGAAAATAACCCTTGA	NA	False	NA	-18	True	ATTAAA	-7	NA	13730758	13696988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13722991_13723145_13730552
ES.128.57	chr1	-	1322	6	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	12	3611	12	3054	5prime_fragment	FALSE	canonical	3	2151	junction_4	166.606842596575	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTTGTTTTTACTTTC	NA	False	NA	-125	True	TATAAA	-26	NA	13730758	13697164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.128.6	chr1	-	5002	3	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	97	-1515	intron_retention	FALSE	canonical	3	2463	junction_1	80.5	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13708538	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13697129_13697579_13700438_13708454
ES.128.7	chr1	-	3274	6	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	12	-1515	intron_retention	FALSE	canonical	3	82	junction_4	945.738103282299	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730758	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13721088_13721109_13730552
ES.128.9	chr1	-	6088	5	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	-31	-1515	intron_retention	FALSE	canonical	3	2151	junction_3	168.877729437602	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730801	13695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ES.1280.2	chr1	-	3055	21	ISM	ENSMUSG00000042349.14	ENSMUST00000062108.10	3251	22	735	5	735	0	3prime_fragment	FALSE	canonical	0	0	junction_18	6.85036495378166	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	NA	False	NA	NA	False	AATAAA	-19	NA	131206609	131182338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886_131203017_131203443_131203585_131204204_131204316_131206435
ES.1280.4	chr1	-	1906	11	NIC	ENSMUSG00000042349.14	novel	2867	21	NA	NA	185	-1	intron_retention	FALSE	canonical	1	4	junction_10	4.42718872423573	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCAGCTATGGTACC	2113	False	NA	NA	False	AATAAA	-18	NA	131198096	131182339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197847_131197922
ES.1280.5	chr1	-	4678	13	NNC	ENSMUSG00000042349.14	novel	2867	21	NA	NA	1340	-2	intron_retention	FALSE	canonical	0	0	junction_8	6.63900511288317	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGCAGCTATGGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	131203110	131182340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131183076_131184623_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197847_131197922_131197988_131199499_131199680_131199844_131199956_131201102_131201269_131201377_131201560_131202886
ES.1280.6	chr1	-	2471	3	ISM	ENSMUSG00000042349.14	ENSMUST00000160748.8	911	5	-337	2726	-337	1593	5prime_fragment	FALSE	canonical	3	13	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGTGTCCTGTGGTCA	5847	False	NA	NA	False	NA	NA	NA	131194362	131189482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131191087_131193375_131193492_131193611
ES.12800.1	chr15	+	720	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	-48	1418	-48	544	multi-exon	FALSE	canonical	3	1440	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTGGTCTCTCTCTT	NA	False	NA	25	True	AGTAAA	-32	NA	99623479	99625995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99623730_99625525
ES.12800.2	chr15	+	2184	2	NNC	ENSMUSG00000023020.4	novel	2090	2	NA	NA	2	478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623529	99625929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99625171_99625386
ES.12800.3	chr15	+	826	3	NNC	ENSMUSG00000023020.4	novel	2090	2	NA	NA	2	544	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	37.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTGGTCTCTCTCTT	NA	False	NA	25	True	AGTAAA	-32	NA	99623529	99625995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99623730_99624452_99624609_99625525
ES.12800.4	chr15	+	2038	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	43	9	13	-9	multi-exon	FALSE	canonical	3	1440	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTCTTTGATG	NA	False	NA	NA	False	AATAAA	-15	NA	99623570	99627404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99623730_99625525
ES.12801.1	chr15	+	178	1	Intergenic	novelGene_10674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	266	False	NA	NA	False	NA	NA	NA	99671385	99671563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99671400_99671600
ES.12802.1	chr15	+	3380	2	Antisense	novelGene_ENSMUSG00000023022.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGACGGCTAGGTAATAAAA	5205	False	NA	NA	False	NA	NA	NA	99676324	99686785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99677862_99684942
ES.12802.2	chr15	+	6345	2	Antisense	novelGene_ENSMUSG00000023022.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGACGGCTAGGTAATAAAA	7092	False	NA	NA	False	NA	NA	NA	99678211	99686785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99679174_99681402
ES.12803.1	chr15	+	1963	2	Antisense	novelGene_ENSMUSG00000023022.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAATCAGA	NA	False	NA	NA	False	NA	NA	NA	99691386	99693600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99692758_99693008
ES.12804.1	chr15	+	191	1	Intergenic	novelGene_10677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGAGTAATGTCAAAAG	6533	False	NA	NA	False	NA	NA	NA	99698756	99698947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99698800_99698900
ES.12805.1	chr15	+	277	1	Intergenic	novelGene_10682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGGCACACGTGCAGA	NA	False	NA	NA	False	NA	NA	NA	99736563	99736840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99736600_99736800
ES.12806.1	chr15	+	1806	1	Antisense	novelGene_ENSMUSG00000023022.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99737771	99739577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99737800_99739600
ES.12807.1	chr15	+	3746	2	Antisense	novelGene_ENSMUSG00000023022.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTTGTAGACCAGGCC	NA	False	NA	NA	False	NA	NA	NA	99752259	99768681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_99752382_99765057
ES.12807.2	chr15	+	204	1	Intergenic	novelGene_10683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGGCTGAGGCTATCG	NA	False	NA	NA	False	NA	NA	NA	99758738	99758942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99758700_99758900
ES.12808.1	chr15	+	190	1	Intergenic	novelGene_10684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAAGGCAAGACAG	NA	False	NA	NA	False	NA	NA	NA	99770077	99770267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99770100_99770300
ES.12809.1	chr15	-	2783	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	21	-708	21	-3	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGCCTTAGTTAATGG	NA	False	NA	NA	False	NA	NA	NA	99670461	99632764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.10	chr15	-	1887	11	NNC	ENSMUSG00000023021.16	novel	2775	11	NA	NA	37	1	intron_retention	FALSE	non_canonical	0	0	junction_1	124.295172874895	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99670306	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634309_99636536_99636612_99637145_99637203_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.11	chr15	-	1740	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	143	1	intron_retention	FALSE	canonical	2	7	junction_9	84.2891847550246	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99669830	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99669768
ES.12809.12	chr15	-	2097	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	-1	0	-1	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670483	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.13	chr15	-	6063	8	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-28	0	intron_retention	FALSE	canonical	2	6	junction_3	92.8698892350508	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670510	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99649223_99670063
ES.12809.14	chr15	-	2030	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-25	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670507	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.15	chr15	-	1814	9	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	14	0	intron_retention	FALSE	canonical	2	6	junction_3	90.2022034098946	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670329	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.16	chr15	-	3569	7	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	42	0	intron_retention	FALSE	canonical	2	3	junction_5	98.2038695775273	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670301	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99639541_99643769_99643828_99649116_99649223_99670063
ES.12809.17	chr15	-	3109	11	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	25	0	intron_retention	FALSE	non_canonical	0	0	junction_6	109.653089331765	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670318	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99641512_99641654_99642733_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.18	chr15	-	2032	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	32	711	32	0	multi-exon	FALSE	canonical	2	12	junction_1	103.150569557322	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670311	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.19	chr15	-	1672	7	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_3	103.839084912934	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670331	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.2	chr15	-	2549	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	25	-3	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGCCTTAGTTAATGG	NA	False	NA	NA	False	NA	NA	NA	99670318	99632764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.20	chr15	-	3770	9	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	62	0	intron_retention	FALSE	canonical	0	0	junction_6	115.204980361094	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670281	99633472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99639541_99643769_99643828_99644917_99645049_99645965_99646056_99649116_99649223_99670063
ES.12809.21	chr15	-	3137	9	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	32	-1	intron_retention	FALSE	canonical	3	244	junction_2	17.1154170267627	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTCTGTCTCTTTAGT	NA	False	NA	-4	True	ATTAAA	-14	NA	99670311	99633473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.22	chr15	-	3029	19	Fusion	ENSMUSG00000023022.15_ENSMUSG00000023021.16	novel	2775	11	NA	NA	29	-1	intron_retention	FALSE	canonical	0	0	junction_9	322.161359194464	1338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTCTGTCTCTTTAGT	7307	False	NA	-4	True	ATTAAA	-14	NA	99773268	99633473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.23	chr15	-	5094	10	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_8	84.4774789186115	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	NA	False	NA	-5	True	ATTAAA	-13	NA	99670331	99633474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99645965_99649223_99670063
ES.12809.24	chr15	-	3845	1	NIC	ENSMUSG00000023021.16	novel	2775	11	NA	NA	7632	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	491	False	NA	-5	True	ATTAAA	-13	NA	99637319	99633474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99633500_99637300
ES.12809.25	chr15	-	4318	5	ISM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	28576	2	3045	-2	intron_retention	FALSE	canonical	3	244	junction_2	12.9301005409857	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	9699	False	NA	-5	True	ATTAAA	-13	NA	99641906	99633474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824
ES.12809.26	chr15	-	2478	9	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	49	-2	intron_retention	FALSE	canonical	3	244	junction_2	17.2336879396141	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	NA	False	NA	-5	True	ATTAAA	-13	NA	99670294	99633474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.27	chr15	-	3798	8	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	244	junction_2	17.7740925885666	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCTGTCTCTTTAG	NA	False	NA	-5	True	ATTAAA	-13	NA	99670401	99633474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.28	chr15	-	6633	7	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_1	103.283993596943	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACTGTCTGTCTCTTTA	NA	False	NA	-6	True	ATTAAA	-12	NA	99670485	99633475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634411_99634470_99637394_99637482_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.29	chr15	-	1814	8	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-46	-3	intron_retention	FALSE	canonical	0	0	junction_6	94.1225861549171	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACTGTCTGTCTCTTTA	NA	False	NA	-6	True	ATTAAA	-12	NA	99670392	99633475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99649116_99649223_99670063
ES.12809.3	chr15	-	3881	7	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-41	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	98.5291834940288	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTGCCTTAGTTAATG	6613	False	NA	NA	False	NA	NA	NA	99644992	99632765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99639142_99639267_99639541_99643769_99643828_99644917
ES.12809.30	chr15	-	1894	11	NNC	ENSMUSG00000023021.16	novel	2775	11	NA	NA	25	-4	intron_retention	FALSE	canonical	0	0	junction_2	108.386761184196	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTACTGTCTGTCTCTTT	NA	False	NA	-7	True	ATTAAA	-11	NA	99670318	99633476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636612_99637145_99637203_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.31	chr15	-	5577	7	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	27	-468	intron_retention	FALSE	non_canonical	0	0	junction_2	102.747938611385	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCATTGACTCGGTT	NA	False	NA	NA	False	TATAAA	-1	NA	99670455	99633940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99636703_99637286_99639142_99639267_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.32	chr15	-	1513	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	108	475	-28	-475	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAATGAGTTTCATTGA	NA	False	NA	NA	False	NA	NA	NA	99670374	99633947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.33	chr15	-	1336	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-24	-557	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	75.4335616434901	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCCTCTGGTCCTTTC	NA	False	NA	NA	False	AAGAAA	-39	NA	99670370	99634029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.34	chr15	-	1475	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	44	577	44	-577	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGCCGTTTTGTATT	NA	False	NA	NA	False	AAGAAA	-19	NA	99670438	99634049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.35	chr15	-	171	1	Intergenic	novelGene_10673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCAAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	99667766	99667595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99667600_99667800
ES.12809.36	chr15	-	4291	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	-42	-6	-42	6	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCACACTGCTCTTATT	7196	False	NA	3	True	AATAAA	-21	NA	99773379	99676344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.37	chr15	-	4246	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_6	271.81002556933	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTCCACACTGCTCT	7231	False	NA	-1	True	AATAAA	-17	NA	99773344	99676348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705545_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.38	chr15	-	4040	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	293.246670910345	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7290	False	NA	-3	True	AATAAA	-15	NA	99773285	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705580_99717480_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.39	chr15	-	4286	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	360.638437558489	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7254	False	NA	-3	True	AATAAA	-15	NA	99773321	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99685205_99685265_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.4	chr15	-	2299	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	75	-278	-61	-3	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATTTCTAATTCAAGA	NA	False	NA	NA	False	TTTAAA	-4	NA	99670407	99633194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.40	chr15	-	4106	10	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	306.539144178326	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7254	False	NA	-3	True	AATAAA	-15	NA	99773321	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717761_99741551_99741705_99773213
ES.12809.41	chr15	-	4364	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	341.894406394675	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	8024	False	NA	-3	True	AATAAA	-15	NA	99772551	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99771475_99771633_99772463
ES.12809.43	chr15	-	3867	10	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	308.991190093756	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7288	False	NA	-3	True	AATAAA	-15	NA	99773287	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704336_99717498_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.44	chr15	-	3157	4	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	521.84735954747	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7304	False	NA	-3	True	AATAAA	-15	NA	99773271	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679167_99681400_99681535_99741555_99741705_99773213
ES.12809.45	chr15	-	4244	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	291.061574241603	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7263	False	NA	-3	True	AATAAA	-15	NA	99773312	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724722_99741532_99741705_99773213
ES.12809.46	chr15	-	4197	10	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	306.253384964916	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7238	False	NA	-3	True	AATAAA	-15	NA	99773337	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99741555_99741705_99773213
ES.12809.47	chr15	-	4317	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	312.650334087393	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7285	False	NA	-3	True	AATAAA	-15	NA	99773290	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99772463_99772585_99773213
ES.12809.49	chr15	-	3286	6	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	462.972742178198	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7304	False	NA	-3	True	AATAAA	-15	NA	99773271	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99678827_99704324_99704453_99705539_99705625_99717374_99717761_99741551_99741705_99773213
ES.12809.5	chr15	-	1941	10	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	10	3	intron_retention	FALSE	canonical	0	0	junction_3	87.0484468486683	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTTTAGTAACT	NA	False	NA	0	True	ATTAAA	-18	NA	99670333	99633469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637286_99637385_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.50	chr15	-	4249	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	266.84948941304	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7225	False	NA	-3	True	AATAAA	-15	NA	99773350	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741698_99773213
ES.12809.51	chr15	-	4044	10	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	283.359780900711	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7288	False	NA	-3	True	AATAAA	-15	NA	99773287	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99773213
ES.12809.53	chr15	-	4113	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	293.161320777486	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7277	False	NA	-3	True	AATAAA	-15	NA	99773298	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717755_99724678_99724719_99741555_99741705_99773213
ES.12809.54	chr15	-	4286	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	341.894406394675	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7285	False	NA	-3	True	AATAAA	-15	NA	99773290	99676350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99763732_99763823_99773213
ES.12809.56	chr15	-	4024	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.930186101658	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7283	False	NA	-4	True	AATAAA	-14	NA	99773292	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99676674_99676846_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.57	chr15	-	5825	2	FSM	ENSMUSG00000023022.15	ENSMUST00000172119.2	506	2	-2551	-2768	-2551	-1	multi-exon	FALSE	canonical	3	1088	junction_1	0	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	NA	False	NA	-4	True	AATAAA	-14	NA	99684405	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99679172_99681400
ES.12809.58	chr15	-	4177	10	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	306.753651109707	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7292	False	NA	-4	True	AATAAA	-14	NA	99773283	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692447_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.59	chr15	-	4305	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	341.894406394675	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7296	False	NA	-4	True	AATAAA	-14	NA	99773279	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99771511_99771633_99773213
ES.12809.6	chr15	-	2072	11	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	-54	1	intron_retention	FALSE	canonical	2	8	junction_2	106.776823327911	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99670400	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636703_99637145_99637203_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.60	chr15	-	3396	6	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	502.282788874952	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7303	False	NA	-4	True	AATAAA	-14	NA	99773272	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99704303_99704453_99705539_99705625_99741555_99741705_99773213
ES.12809.61	chr15	-	4243	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	390.848372134259	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7285	False	NA	-4	True	AATAAA	-14	NA	99773290	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99741555_99741705_99766324_99766419_99773213
ES.12809.62	chr15	-	4203	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	335.707312997498	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7264	False	NA	-4	True	AATAAA	-14	NA	99773311	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705545_99705625_99717374_99717840_99724672_99724719_99741555_99741698_99773213
ES.12809.65	chr15	-	4349	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	341.894406394675	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7288	False	NA	-4	True	AATAAA	-14	NA	99773287	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99771475_99771633_99773213
ES.12809.66	chr15	-	3578	8	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	320.871517296635	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7242	False	NA	-4	True	AATAAA	-14	NA	99773333	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99773213
ES.12809.67	chr15	-	3738	10	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	308.727535794954	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7277	False	NA	-4	True	AATAAA	-14	NA	99773298	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99724672_99724719_99741555_99741705_99773213
ES.12809.7	chr15	-	4974	8	ISM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	22032	-1	-3499	1	3prime_fragment	FALSE	canonical	3	244	junction_2	12.5746749055231	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	3155	False	NA	-2	True	ATTAAA	-16	NA	99648450	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917
ES.12809.70	chr15	-	4193	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	357.582401068228	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCACACTGC	7309	False	NA	-4	True	AATAAA	-14	NA	99773266	99676351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99736249_99736272_99741555_99741705_99773213
ES.12809.73	chr15	-	4268	12	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	326.375259352414	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCCAGTGTCCACACT	7304	False	NA	-6	True	AATAAA	-12	NA	99773271	99676353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99766324_99766419_99773213
ES.12809.74	chr15	-	3763	9	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	323.978370227088	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCCAGTGTCCACACT	7204	False	NA	-6	True	AATAAA	-12	NA	99773371	99676353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99741555_99741705_99773213
ES.12809.77	chr15	-	3471	7	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.554953422779	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTCCAGTGTCCACAC	7236	False	NA	-7	True	AATAAA	-11	NA	99773339	99676354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99678827_99704324_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.78	chr15	-	3605	10	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	-4	-596	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	306.253384964916	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGTCCTACTTTGAT	7234	False	NA	NA	False	ATTAAA	-23	NA	99773341	99676946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99741555_99741705_99773213
ES.12809.79	chr15	-	3637	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	10	596	10	-596	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGTCCTACTTTGAT	7248	False	NA	NA	False	ATTAAA	-23	NA	99773327	99676946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.8	chr15	-	7243	3	NNC	ENSMUSG00000023021.16	novel	884	8	NA	NA	4088	1	intron_retention	TRUE	canonical	0	0	junction_1	129	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99640863	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634411_99634470_99637394_99637482
ES.12809.80	chr15	-	3600	11	NNC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	4	-598	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_6	311.824646235669	1143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCCGTGTCCTACTTTG	8027	False	NA	NA	False	ATTAAA	-21	NA	99772548	99676948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705545_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99772463
ES.12809.81	chr15	-	2585	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	65	1593	25	1176	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGGTAAACACCTTTA	7303	False	NA	NA	False	AAAACA	-22	NA	99773272	99677943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.82	chr15	-	1499	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	50	2694	10	75	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCGACAATGAGGAGAC	7288	False	NA	NA	False	NA	NA	NA	99773287	99679044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.83	chr15	-	223	1	Intergenic	novelGene_10675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGTTAGCACAGTGTT	NA	False	NA	NA	False	NA	NA	NA	99679579	99679356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99679400_99679600
ES.12809.84	chr15	-	2305	10	ISM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	49	4118	9	-1349	5prime_fragment	FALSE	canonical	3	692	junction_3	112.972956449271	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACCGGGCTGGAGAGG	7287	False	NA	NA	False	NA	NA	NA	99773288	99680468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ES.12809.85	chr15	-	178	1	Intergenic	novelGene_10676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	950	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAAAAAT	8563	False	NA	NA	False	NA	NA	NA	99698283	99698105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99698100_99698300
ES.12809.86	chr15	-	174	1	Intergenic	novelGene_10678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	922	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99708959	99708785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99708800_99709000
ES.12809.87	chr15	-	1759	2	NNC	ENSMUSG00000023022.15	novel	448	4	NA	NA	282	5486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGAAAGAGTTTATT	6053	False	NA	NA	False	NA	NA	NA	99717742	99712189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99712413_99716206
ES.12809.88	chr15	-	230	1	Intergenic	novelGene_10679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTAGCTGTAATCT	3709	False	NA	NA	False	NA	NA	NA	99720086	99719856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99719900_99720100
ES.12809.89	chr15	-	240	1	Intergenic	novelGene_10680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	914	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	3467	False	NA	NA	False	NA	NA	NA	99720328	99720088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99720100_99720300
ES.12809.9	chr15	-	3495	9	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	31	1	intron_retention	FALSE	non_canonical	0	0	junction_4	112.100889269443	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTCTCTTTAGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	99670312	99633471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99639142_99639267_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ES.12809.90	chr15	-	155	1	Intergenic	novelGene_10681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	887	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	99729383	99729228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99729200_99729400
ES.12809.91	chr15	-	2732	2	FSM	ENSMUSG00000023022.15	ENSMUST00000171450.2	2680	2	7	-59	7	59	multi-exon	FALSE	canonical	3	1109	junction_1	0	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	7285	False	NA	NA	False	NA	NA	NA	99773290	99739049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99741705_99773213
ES.12809.92	chr15	-	3786	2	NNC	ENSMUSG00000023022.15	novel	2680	2	NA	NA	-26933	-1989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACTTGTAAAGTAAAATG	NA	False	NA	NA	False	NA	NA	NA	99744957	99741097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_99743086_99743159
ES.12809.93	chr15	-	683	2	FSM	ENSMUSG00000023022.15	ENSMUST00000171450.2	2680	2	-4	2001	-4	-2001	multi-exon	FALSE	canonical	3	1109	junction_1	0	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAAAGATACTTG	7274	False	NA	NA	False	NA	NA	NA	99773301	99741109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_99741705_99773213
ES.12809.94	chr15	-	4589	2	Genic_Genomic	ENSMUSG00000023022.15	novel	4243	11	NA	NA	16	-29511	multi-exon	FALSE	non_canonical	0	0	junction_1	0	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAACCTCTAGA	7294	False	NA	NA	False	NA	NA	NA	99773281	99768619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_99772075_99772147
ES.12809.95	chr15	-	4627	2	Genic_Genomic	ENSMUSG00000023022.15	novel	4243	11	NA	NA	19	-29511	multi-exon	TRUE	non_canonical	0	0	junction_1	0	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAACCTCTAGA	7257	False	NA	NA	False	NA	NA	NA	99773318	99768619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_99772056_99772127
ES.12809.96	chr15	-	4601	2	Genic_Genomic	ENSMUSG00000023022.15	novel	4243	11	NA	NA	9	-29511	multi-exon	TRUE	non_canonical	0	0	junction_1	0	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAACCTCTAGA	7287	False	NA	NA	False	NA	NA	NA	99773288	99768619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_99772054_99772121
ES.12809.99	chr15	-	4597	2	Genic_Genomic	ENSMUSG00000023022.15	novel	4243	11	NA	NA	10	-29511	multi-exon	TRUE	non_canonical	0	0	junction_1	0	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGACAAACCTCTAGA	7288	False	NA	NA	False	NA	NA	NA	99773287	99768619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_99772065_99772135
ES.1281.1	chr1	+	1439	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAGAACAACAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	131447040	131448479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131447000_131448500
ES.12810.1	chr15	+	5387	2	Fusion	ENSMUSG00000115856.2_ENSMUSG00000116518.2_ENSMUSG00000116478.2	novel	440	2	NA	NA	4	232	intron_retention	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTTTGTCTTCCTCCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	99773463	99782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_99773624_99777330
ES.12811.1	chr15	+	178	1	Intergenic	novelGene_10685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99804606	99804784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99804600_99804800
ES.12812.1	chr15	-	311	1	Intergenic	novelGene_10686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99827631	99827320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99827300_99827600
ES.12812.2	chr15	-	177	1	Intergenic	novelGene_10687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTCAATTCCCA	NA	False	NA	NA	False	NA	NA	NA	99827631	99827454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99827500_99827600
ES.12813.1	chr15	+	2512	4	FSM	ENSMUSG00000096111.8	ENSMUST00000180309.2	561	4	-29	-1922	-29	1430	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTATGTGTATGAGA	8412	False	NA	NA	False	AATAAA	-13	NA	99829562	99852355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99829784_99830695_99830869_99831367_99831496_99850365
ES.12813.11	chr15	+	4784	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-253	345	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATTAGAAACTTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	99870407	99912237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.12	chr15	+	6780	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	-249	-1	-249	1	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTTTTTTCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	99870411	99914240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.15	chr15	+	4343	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	24	181	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAGAACTTTAGGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	99870684	99912073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.17	chr15	+	6078	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	27	425	27	-425	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTGTTGTGTCTTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	99870687	99913814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.19	chr15	+	3770	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-18	463	intron_retention	FALSE	canonical	3	323	junction_1	88.3980157224893	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATAAATATAATT	NA	False	NA	NA	False	NA	NA	NA	99870698	99910287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.2	chr15	+	1039	2	ISM	ENSMUSG00000096111.8	ENSMUST00000179575.8	575	3	97	-62	97	62	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAATCAAGAATTAGAT	8538	False	NA	NA	False	NA	NA	NA	99829688	99831639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99829784_99830695
ES.12813.20	chr15	+	3472	1	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-18	-16203	mono-exon	FALSE	NA	NA	NA	NA	NA	665	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACCCATTTTATGATAA	NA	False	NA	NA	False	NA	NA	NA	99870698	99874170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870700_99874200
ES.12813.25	chr15	+	4147	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCGTGTAACCCAGAAT	NA	False	NA	NA	False	AAAACA	-6	NA	99870702	99911895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.26	chr15	+	6426	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	172.730118617313	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870710	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.28	chr15	+	6511	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	167.367805214211	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870714	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909681
ES.12813.3	chr15	+	2418	5	NNC	ENSMUSG00000096111.8	novel	561	4	NA	NA	116	1430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTATGTGTATGAGA	8557	False	NA	NA	False	AATAAA	-13	NA	99829707	99852355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99829736_99830695_99830869_99831367_99831496_99832700_99832800_99850365
ES.12813.31	chr15	+	3220	2	NNC	ENSMUSG00000023025.17	novel	2192	15	NA	NA	0	-16222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCCAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99870716	99874151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99872885_99873099
ES.12813.32	chr15	+	4601	17	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	204.748998394986	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCACTTGATAAGGA	NA	False	NA	NA	False	AATAAA	-9	NA	99870716	99912223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99874259_99874400_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.34	chr15	+	4451	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.291657673072	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAAATCACTTGATAAG	NA	False	NA	NA	False	AATAAA	-7	NA	99870716	99912221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870849_99882789_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.35	chr15	+	6479	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	168.478999680475	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCTGGTTTCTTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	99870716	99914237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903291_99905487_99905610_99908172_99908342_99909716
ES.12813.36	chr15	+	7945	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	-25	intron_retention	FALSE	canonical	3	302	junction_1	93.4181132198195	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	99870717	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.38	chr15	+	3511	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	57	2962	0	-518	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAGAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	99870717	99911277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.39	chr15	+	6580	17	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	207.190120647076	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	99870718	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99907812_99907943_99908172_99908342_99909716
ES.12813.4	chr15	+	6511	16	Fusion	ENSMUSG00000096111.8_ENSMUSG00000023025.17	novel	606	3	NA	NA	-75	1	multi-exon	FALSE	canonical	2	2	junction_1	157.819305958851	893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTTTTTTCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	99832618	99914240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_99832800_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.40	chr15	+	3124	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	1	-907	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGACCTTTTTTTTTCC	NA	False	NA	NA	False	AATAGA	-20	NA	99870718	99910888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.42	chr15	+	3310	17	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	2	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	165.57993490683	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	99870719	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716_99910955_99914093
ES.12813.44	chr15	+	4499	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	2	337	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	169.30503700586	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTGATAAGGATTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	99870719	99912229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909681
ES.12813.48	chr15	+	5116	5	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	267.937959236835	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870724	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.49	chr15	+	5167	7	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	244.270626332535	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTGGTTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	99870725	99914236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99883960_99903246_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.5	chr15	+	4490	16	Fusion	ENSMUSG00000096111.8_ENSMUSG00000023025.17	novel	606	3	NA	NA	-57	345	multi-exon	FALSE	canonical	2	2	junction_1	157.819305958851	867	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATTAGAAACTTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	99832636	99912237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_99832800_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.54	chr15	+	4398	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	11	337	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	172.730118617313	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTGATAAGGATTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	99870728	99912229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.55	chr15	+	7132	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	12	-25	intron_retention	FALSE	canonical	3	323	junction_1	87.3547774472418	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	99870729	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.57	chr15	+	3221	1	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	12	-16423	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGTCTCAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	99870729	99873950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870700_99874000
ES.12813.59	chr15	+	2981	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	16	936	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTGTGACTACCAATC	NA	False	NA	NA	False	TATAAA	-15	NA	99870733	99910760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.61	chr15	+	6359	16	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-15	-100	combination_of_known_junctions	FALSE	canonical	3	302	junction_1	90.2603641325102	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGAGCATCTTTGTATT	NA	False	NA	NA	False	CATAAA	-6	NA	99870734	99914139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.62	chr15	+	6443	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.89107600923	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTGGTTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	99870734	99914236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885350_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.63	chr15	+	6380	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	170.601471922789	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTCTGGTTTCTTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	99870737	99914237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898856_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.64	chr15	+	6140	18	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	205.497943649786	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870738	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716_99911066_99911308_99911928_99911999
ES.12813.68	chr15	+	3936	15	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	11	4	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	172.730118617313	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAATTACATTACTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	99870760	99911799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.69	chr15	+	2546	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	135	3849	-3	566	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAACATTATACA	NA	False	NA	NA	False	NA	NA	NA	99870795	99910390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.7	chr15	+	2141	2	FSM	ENSMUSG00000096111.8	ENSMUST00000177831.2	666	2	-45	-1430	-45	1430	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTATGTGTATGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	99832648	99852355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_99832800_99850365
ES.12813.70	chr15	+	6424	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	157	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.291657673072	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870956	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871052_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.71	chr15	+	6410	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.291657673072	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870997	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871082_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.72	chr15	+	6360	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	389	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	158.055461433286	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99871188	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871220_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.73	chr15	+	4350	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	389	337	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	158.055461433286	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTGATAAGGATTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	99871188	99912229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871220_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.75	chr15	+	6831	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	444	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	157.111085965737	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99871243	99914239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871746_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.77	chr15	+	4802	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	466	340	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	157.111085965737	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGATAAGGATTAGAAACT	NA	False	NA	NA	False	AATAAA	-18	NA	99871265	99912232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871746_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.78	chr15	+	6184	16	NNC	ENSMUSG00000023025.17	novel	606	3	NA	NA	660	-431	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	157.111085965737	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACAATGTGTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	99871459	99913808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99871746_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.79	chr15	+	178	1	Intergenic	novelGene_10688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAAAT	225	False	NA	NA	False	NA	NA	NA	99875817	99875995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99875800_99876000
ES.12813.80	chr15	+	6166	14	ISM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	13257	25	13118	-25	3prime_fragment	FALSE	canonical	3	532	junction_8	50.3023991569661	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	8325	False	NA	NA	False	ATTAAA	-14	NA	99883917	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.81	chr15	+	4927	5	ISM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	29020	100	1246	-100	3prime_fragment	FALSE	canonical	3	552	junction_4	50.0967813337344	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGAGCATCTTTGTATT	NA	False	NA	NA	False	CATAAA	-6	NA	99899680	99914139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.82	chr15	+	5810	4	ISM	ENSMUSG00000023025.17	ENSMUST00000231128.2	643	5	1143	-4408	1143	-7	3prime_fragment	FALSE	canonical	3	552	junction_3	51.9230199429887	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGGTCTGGTTTCTT	NA	False	NA	NA	False	AATAAA	-8	NA	99902280	99914232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99903284_99905487_99905610_99908172_99908342_99909716
ES.12813.83	chr15	+	2800	3	ISM	ENSMUSG00000023025.17	ENSMUST00000231128.2	643	5	4348	-2399	4348	331	3prime_fragment	FALSE	canonical	3	552	junction_2	63	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCACTTGATAAGGA	2539	False	NA	NA	False	AATAAA	-9	NA	99905485	99912223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99905610_99908172_99908342_99909716
ES.12813.84	chr15	+	4791	3	ISM	ENSMUSG00000023025.17	ENSMUST00000231128.2	643	5	4348	-4390	4348	-25	3prime_fragment	FALSE	canonical	3	552	junction_2	63	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTATTGAA	2539	False	NA	NA	False	ATTAAA	-14	NA	99905485	99914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_99905610_99908172_99908342_99909716
ES.12813.9	chr15	+	2025	2	NNC	ENSMUSG00000096111.8	novel	561	4	NA	NA	6315	1430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTATGTGTATGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	99839008	99852355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99839044_99850365
ES.12814.1	chr15	-	173	1	Intergenic	novelGene_10689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	99890841	99890668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99890700_99890800
ES.12815.1	chr15	-	176	1	Intergenic	novelGene_10690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAGAA	9893	False	NA	NA	False	NA	NA	NA	99906043	99905867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99905900_99906000
ES.12816.1	chr15	-	232	1	Intergenic	novelGene_10691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCCAGAGGACTCAGG	NA	False	NA	NA	False	AAGAAA	-35	NA	99934032	99933800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99933800_99934000
ES.12817.1	chr15	+	8951	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-36	4	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAATTCTTAAACCTTG	4821	False	NA	13	True	AATAAA	-17	NA	99936508	100117358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.10	chr15	+	6265	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	8	1169	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGACTTGTAATTACCC	4865	False	NA	NA	False	ACTAAA	-18	NA	99936552	100114716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.11	chr15	+	8911	38	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	13.5363051044295	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTATGTTTAATTCTTA	4866	False	NA	6	True	AATAAA	-10	NA	99936553	100117351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096940_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105718_100107459_100107638_100109864_100109989_100113058
ES.12817.12	chr15	+	4704	38	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	80	3849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	11.1728566005524	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTCGCTTTTGTTTTC	4937	False	NA	NA	False	NA	NA	NA	99936624	100121203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100121034
ES.12817.14	chr15	+	5007	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	95	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTATAGAGACCTG	4952	False	NA	NA	False	ACTAAA	-27	NA	99936639	100113545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.15	chr15	+	6886	38	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	107	1883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.9868106065683	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCCCTAGCTGCTTATA	4964	False	NA	NA	False	NA	NA	NA	99936651	100115430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053041_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.16	chr15	+	8683	37	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	108	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.3386085217665	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTCTTAAACCTTGGG	4965	False	NA	15	True	AATAAA	-19	NA	99936652	100117360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.18	chr15	+	3010	19	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	127	7848	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	6.23807504338587	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	4984	False	NA	NA	False	NA	NA	NA	99936671	100073893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081
ES.12817.19	chr15	+	8859	39	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	128	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6295720936889	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	4985	False	NA	10	True	AATAAA	-14	NA	99936672	100117355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100024060_100024136_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.2	chr15	+	2024	13	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	6.29097678336909	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAAAGTATGATTTCT	4829	False	NA	NA	False	AATAAA	-17	NA	99936516	100066044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736
ES.12817.20	chr15	+	5268	37	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	141	-2769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	11.3091722306812	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTCTTTCTGGGTTTT	4998	False	NA	NA	False	ATTAAA	-22	NA	99936685	100110778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079322_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864
ES.12817.21	chr15	+	214	1	Intergenic	novelGene_10692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAACAGCCAGAGT	NA	False	NA	NA	False	AATAAA	-10	NA	99942212	99942426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99942200_99942400
ES.12817.22	chr15	+	204	1	Intergenic	novelGene_10694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	99947969	99948173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99948000_99948200
ES.12817.23	chr15	+	173	1	Intergenic	novelGene_10695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	99952424	99952597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_99952400_99952600
ES.12817.24	chr15	+	5881	1	Intergenic	novelGene_10698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAAGAACTATAAACGT	NA	False	NA	NA	False	NA	NA	NA	100031281	100037162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100031300_100037200
ES.12817.25	chr15	+	7980	32	ISM	ENSMUSG00000023026.17	ENSMUST00000100203.10	8914	38	116369	2	637	-2	3prime_fragment	FALSE	canonical	2	4	junction_1	11.2029801297566	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATGTTTAATTCTTAA	NA	False	NA	7	True	AATAAA	-11	NA	100052913	100117352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100053038_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.26	chr15	+	7223	26	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	13458	-3805	5127	-2	3prime_fragment	FALSE	canonical	3	41	junction_10	7.66331520948995	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATGTTTAATTCTTAA	2123	False	NA	7	True	AATAAA	-11	NA	100065734	100117352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.27	chr15	+	1451	8	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	17261	28857	8930	-13282	internal_fragment	FALSE	canonical	3	41	junction_7	6.29544701043734	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTTGCCTGATGTCTA	2030	False	NA	NA	False	ATTAAA	-13	NA	100069537	100084690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021
ES.12817.28	chr15	+	157	1	Intergenic	novelGene_10701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATAAATAAATCTTA	6388	False	NA	NA	False	NA	NA	NA	100073895	100074052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100073900_100074100
ES.12817.29	chr15	+	6126	16	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	31742	-3805	-12802	-2	3prime_fragment	FALSE	canonical	3	43	junction_6	7.61110300080671	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATGTTTAATTCTTAA	8905	False	NA	7	True	AATAAA	-11	NA	100084018	100117352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.3	chr15	+	5330	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-21	205	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGGACTGCTTTGTGT	4836	False	NA	NA	False	NA	NA	NA	99936523	100113752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.30	chr15	+	177	1	Intergenic	novelGene_10703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTTAAAGCCGGG	1664	False	NA	NA	False	NA	NA	NA	100085893	100086070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100085900_100086100
ES.12817.31	chr15	+	180	1	Intergenic	novelGene_10704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACACCAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	100094447	100094627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100094400_100094600
ES.12817.32	chr15	+	3106	3	NNC	ENSMUSG00000023026.17	novel	743	2	NA	NA	-384	-2768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTTTCTGGGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	100096436	100110779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100096932_100097340_100098537_100109364
ES.12817.33	chr15	+	213	1	Intergenic	novelGene_10705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGCTGTTACTCTCA	NA	False	NA	NA	False	NA	NA	NA	100098547	100098760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100098500_100098800
ES.12817.34	chr15	+	6043	7	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-1083	0	intron_retention	FALSE	canonical	3	50	junction_5	4.6785562825394	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	NA	False	NA	9	True	AATAAA	-13	NA	100099933	100117354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.35	chr15	+	5139	8	ISM	ENSMUSG00000023026.17	ENSMUST00000023768.14	4320	33	47787	-3808	-953	1	3prime_fragment	FALSE	canonical	3	50	junction_6	6.45233702322069	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTAATTCTTAAACC	NA	False	NA	10	True	AATAAA	-14	NA	100100063	100117355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.4	chr15	+	6153	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-15	1034	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTGTTAAATCAGAATG	4842	False	NA	NA	False	ATTAAA	-24	NA	99936529	100114581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.7	chr15	+	8911	38	NNC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	11.1473299793435	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAATTCTTAAACCT	4850	False	NA	11	True	AATAAA	-15	NA	99936537	100117356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088014_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12817.8	chr15	+	6961	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	-4	1853	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAACAACAAAAAAA	4853	False	NA	NA	False	NA	NA	NA	99936540	100115400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ES.12818.1	chr15	-	3253	1	Intergenic	novelGene_10693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGTTACTTCCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	99949486	99946233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99946200_99949500
ES.12819.1	chr15	-	1895	1	Intergenic	novelGene_10696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGTGAGAAAAGGAGA	3529	False	NA	NA	False	NA	NA	NA	99969197	99967302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99967300_99969200
ES.1282.1	chr1	+	2658	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	-1305	838	-1305	-838	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAACGTTTACTGTTTT	NA	False	NA	12	True	AGTAAA	-25	NA	131454335	131466772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ES.1282.2	chr1	+	11161	1	Genic_Genomic	ENSMUSG00000055184.5	novel	NA	NA	NA	NA	-37	-846	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAGTGGAACGTTT	NA	False	NA	4	True	AGTAAA	-17	NA	131455603	131466764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_131455600_131466800
ES.12820.1	chr15	-	182	1	Intergenic	novelGene_10697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	99977690	99977508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_99977500_99977700
ES.12821.1	chr15	-	174	1	Intergenic	novelGene_10699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	100046940	100046766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100046800_100046900
ES.12822.1	chr15	-	178	1	Intergenic	novelGene_10700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAAACTATT	NA	False	NA	NA	False	NA	NA	NA	100052819	100052641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100052600_100052800
ES.12823.1	chr15	-	175	1	Intergenic	novelGene_10702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATGATAGCA	NA	False	NA	NA	False	NA	NA	NA	100083162	100082987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100083000_100083200
ES.12824.1	chr15	-	170	1	Intergenic	novelGene_10706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAGCAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	100101501	100101331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100101300_100101500
ES.12825.1	chr15	-	2546	1	Antisense	novelGene_ENSMUSG00000023026.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	100109796	100107250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_100107200_100109800
ES.12825.2	chr15	-	175	1	Intergenic	novelGene_10707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	100109378	100109203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100109200_100109400
ES.12826.1	chr15	+	2360	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-34	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125665	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.10	chr15	+	2162	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	25	-137	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCAGCTGTGGTCAG	NA	False	NA	NA	False	TATAAA	-10	NA	100125724	100158988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158169_100158209
ES.12826.11	chr15	+	4148	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-21	1855	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAAAGGATTCCTC	NA	False	NA	NA	False	NA	NA	NA	100125730	100160980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158185_100158225
ES.12826.12	chr15	+	2378	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	116.535283164466	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125731	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151931_100152155_100152234_100152395_100157695
ES.12826.13	chr15	+	2162	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	32	171	-20	-171	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAATTGTATGTTTTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	100125731	100158954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.14	chr15	+	2365	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	133.539721217536	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125732	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130785_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.17	chr15	+	2189	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	132.764202002397	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125735	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.18	chr15	+	2226	6	NIC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	119.054609318581	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAAGTTTTCGGAATG	NA	False	NA	9	True	ATTAAA	-12	NA	100125735	100159121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100125964_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.2	chr15	+	2310	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.633054883602	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125667	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125871_100130613_100130713_100143125_100143231_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.20	chr15	+	2230	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	118.790782470695	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAAGTTTTCGGAATG	NA	False	NA	9	True	ATTAAA	-12	NA	100125752	100159121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125886_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.22	chr15	+	2251	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	21	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	110.684143362257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125772	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158191_100158233
ES.12826.23	chr15	+	1457	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	83	825	31	296	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTATGTGGTCTGATT	NA	False	NA	29	True	AATAAA	-37	NA	100125782	100158300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.24	chr15	+	2261	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	139.305859349058	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	False	NA	13	True	ATTAAA	-16	NA	100125805	100159125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151931_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.26	chr15	+	1983	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	117	-172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAATTGTATGTTTTA	NA	False	NA	NA	False	AGTAAA	-18	NA	100125868	100158953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.27	chr15	+	2060	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	131	-129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	116.894064101742	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGGTCAGTACACCAG	NA	False	NA	NA	False	TATAAA	-18	NA	100125882	100158996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151967_100152155_100152234_100152395_100157695
ES.12826.28	chr15	+	1541	8	NNC	ENSMUSG00000023027.14	novel	861	5	NA	NA	-62	271	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	149.567949202265	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATAAAGCGTTACTA	NA	False	NA	4	True	AATAAA	-12	NA	100126081	100158275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100126411_100130613_100130715_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158197_100158237
ES.12826.29	chr15	+	3209	7	NNC	ENSMUSG00000023027.14	novel	861	5	NA	NA	-36	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	118.05989534507	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTCGGAATGCAAAACAT	NA	False	NA	17	True	ATTAAA	-20	NA	100126107	100159129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100127212_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.3	chr15	+	2399	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	-32	-2	-32	2	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125667	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.30	chr15	+	3816	7	NNC	ENSMUSG00000023027.14	novel	861	5	NA	NA	-19	2	intron_retention	FALSE	canonical	0	0	junction_1	119.521848304911	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100126124	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100126799_100129574_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.31	chr15	+	2207	7	NIC	ENSMUSG00000023027.14	novel	604	6	NA	NA	14	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	119.521848304911	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100130092	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100130197_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.32	chr15	+	2056	7	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	119.521848304911	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAAGTTTTCGGAATGC	NA	False	NA	10	True	ATTAAA	-13	NA	100130612	100159122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158221
ES.12826.33	chr15	+	3575	2	NNC	ENSMUSG00000023027.14	novel	312	3	NA	NA	3415	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCGGAATGCAAAA	1115	False	NA	14	True	ATTAAA	-17	NA	100155510	100159126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100158179_100158219
ES.12826.4	chr15	+	2347	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCGGAATGCAAAAC	NA	False	NA	15	True	ATTAAA	-18	NA	100125675	100159127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158165_100158208
ES.12826.6	chr15	+	1484	8	NNC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	-2	279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.684143362257	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGTTACTAAGTATGTA	NA	False	NA	12	True	AATAAA	-20	NA	100125697	100158283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695_100158179_100158219
ES.12826.7	chr15	+	1089	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	-1	1277	-1	55	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAAGTATTTTTTGTGG	NA	False	NA	NA	False	CATAAA	-18	NA	100125698	100157848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12826.8	chr15	+	4220	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	11	-1866	11	1866	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCCTCATGTTTGATAA	NA	False	NA	NA	False	NA	NA	NA	100125710	100160991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ES.12827.1	chr15	-	934	1	Antisense	novelGene_ENSMUSG00000023027.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAAGTACTCGGGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	100126052	100125118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_100125100_100126100
ES.12828.1	chr15	-	171	1	Intergenic	novelGene_10708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACATAGGAGT	NA	False	NA	NA	False	NA	NA	NA	100141864	100141693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100141700_100141900
ES.12829.1	chr15	-	176	1	Intergenic	novelGene_10709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	100163321	100163145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100163100_100163300
ES.1283.1	chr1	-	5249	1	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	5084	-797	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	131219034	131213785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131213800_131219000
ES.1283.10	chr1	-	6147	22	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-72	-1242	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	29.7399919331093	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131442042	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131441908
ES.1283.11	chr1	-	6769	22	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	16	-1242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.9437870932774	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455069	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131261568_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.12	chr1	-	6859	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-17	-1242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.3432648975799	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455107	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220587_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131436333_131436384_131452675_131453332_131454970
ES.1283.13	chr1	-	6985	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-37	-1242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	37.7392306149742	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455127	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131422137_131422297_131452675_131453332_131454970
ES.1283.15	chr1	-	6802	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-7	-1242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.4427936713477	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455097	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264121_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.17	chr1	-	6428	22	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	31	-1242	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.9804844805194	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455054	131214230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.18	chr1	-	6559	22	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	31	-1243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	29.4283402672382	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCTGTACGTCACCTC	NA	False	NA	-10	True	AATAAA	-16	NA	131455054	131214231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131452675_131453332_131454970
ES.1283.19	chr1	-	6819	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-181	-1243	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	29.0781221897605	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCTGTACGTCACCTC	NA	False	NA	-10	True	AATAAA	-16	NA	131455271	131214231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131455120
ES.1283.2	chr1	-	6978	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-182	1230	-177	-1230	multi-exon	TRUE	canonical	3	89	junction_2	12.3013135091171	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCCCTTCCCCTCTCC	NA	False	NA	3	True	AATAAA	-29	NA	131455267	131214218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.20	chr1	-	6748	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-14	-1243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.8096549663765	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCTGTACGTCACCTC	NA	False	NA	-10	True	AATAAA	-16	NA	131455104	131214231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131216486_131216539_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.21	chr1	-	6679	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	1	-1243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.521740294405	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCTGTACGTCACCTC	NA	False	NA	-10	True	AATAAA	-16	NA	131455089	131214231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220476_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.22	chr1	-	6908	24	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-26	-1244	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	36.103662974153	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCGCTGTACGTCACCT	NA	False	NA	-11	True	AATAAA	-15	NA	131455116	131214232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131219333_131219429_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.23	chr1	-	6892	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-8	-1244	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	43.9490924510703	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCGCTGTACGTCACCT	NA	False	NA	-11	True	AATAAA	-15	NA	131455098	131214232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131219333_131219429_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252890_131261570_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.24	chr1	-	10232	22	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	18	-1250	intron_retention	FALSE	canonical	3	115	junction_12	9.01271462675429	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTTTGCCGCTGTACG	NA	False	NA	-17	True	AATAAA	-9	NA	131455067	131214238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131220258_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.25	chr1	-	6719	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-48	1355	-43	-1355	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTATGTATGCTTGA	NA	False	NA	NA	False	TTTAAA	-18	NA	131455133	131214343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.26	chr1	-	6082	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-72	-1357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	38.568630468275	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATTGTATGTATGCTT	NA	False	NA	NA	False	TTTAAA	-16	NA	131442042	131214345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131436333_131436384_131441908
ES.1283.27	chr1	-	5275	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-187	2938	-182	1169	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTGTTTTTTGTTTAT	NA	False	NA	NA	False	GATAAA	-20	NA	131455272	131215926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.28	chr1	-	5113	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	781	1085	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	28.8892513398185	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGCTTAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	131454304	131216010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454080
ES.1283.29	chr1	-	5010	22	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-6	1084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.9437870932774	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGCTTAGTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	131455096	131216011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131261573_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.30	chr1	-	4360	22	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-66	1084	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	29.7399919331093	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGCTTAGTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	131442036	131216011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131441908
ES.1283.31	chr1	-	3955	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-6	4077	-1	30	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGGCCGTTTCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	131455091	131217065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.32	chr1	-	3576	22	FSM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	-43	0	-38	0	multi-exon	FALSE	canonical	3	29	junction_1	23.367225143015	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455128	131222955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.33	chr1	-	3397	22	NNC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1835228259912	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455069	131222955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131223158_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.34	chr1	-	4497	21	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	-184	9967	-179	0	5prime_fragment	FALSE	canonical	3	115	junction_11	8.98943824718764	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455269	131222955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.35	chr1	-	5059	21	NIC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_1	29.579511490219	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGTTGCCAGATCTCTT	NA	False	NA	-1	True	AATAAA	-25	NA	131455099	131222956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131224938_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.36	chr1	-	3571	23	NNC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.3435379557681	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGTTGCCAGATCTCTT	NA	False	NA	-1	True	AATAAA	-25	NA	131455062	131222956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131398595_131398658_131452675_131453332_131454970
ES.1283.37	chr1	-	4264	22	NIC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	35.2441436250612	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGTTGCCAGATCTCTT	NA	False	NA	-1	True	AATAAA	-25	NA	131455084	131222956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131223278_131224057_131224938_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.4	chr1	-	5738	19	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	7174	-1239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	48.9801232045797	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTACGTCACCTCCCTT	NA	False	NA	-6	True	AATAAA	-20	NA	131284628	131214227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261618_131264123_131264213_131272086_131272285_131273499_131273602_131276401_131276559_131277189_131277415_131283248_131283378_131284427
ES.1283.41	chr1	-	4444	22	NNC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_21	35.0993407177523	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGGTTGCCAGATCTC	NA	False	NA	-3	True	AATAAA	-23	NA	131455109	131222958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454080
ES.1283.43	chr1	-	3352	21	NIC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	41	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	35.925304452433	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGAGGTTGCCAGATC	NA	False	NA	-5	True	AATAAA	-21	NA	131455044	131222960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.44	chr1	-	3499	21	NNC	ENSMUSG00000026425.16	novel	3533	22	NA	NA	23	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	36.1873942140077	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACTGCATGAGGTTGC	NA	False	NA	-11	True	AATAAA	-15	NA	131455062	131222966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131261569_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.45	chr1	-	3475	21	ISM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	41	797	41	-259	5prime_fragment	FALSE	canonical	3	115	junction_11	8.98943824718764	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTGGTTTTGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	131455044	131223752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.46	chr1	-	4469	2	Genic_Genomic	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-1700	-4805	multi-exon	TRUE	non_canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAACGAAAACGAAAACG	4673	False	NA	NA	False	AAAACA	-37	NA	131240503	131229183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_131229823_131236673
ES.1283.47	chr1	-	2453	14	NNC	ENSMUSG00000026425.16	novel	3171	5	NA	NA	-27	-11512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.109137659119	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATTTGCAGGG	NA	False	NA	NA	False	GATAAA	-11	NA	131455117	131258784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131259008_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.48	chr1	-	3126	11	ISM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	16	40175	16	-15858	5prime_fragment	FALSE	canonical	3	115	junction_1	10.4709120901667	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAAAAAAAAGCCTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	131455069	131263130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ES.1283.49	chr1	-	178	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	131367422	131367244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131367200_131367400
ES.1283.5	chr1	-	6495	12	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	191608	1241	-2669	-1241	3prime_fragment	FALSE	canonical	3	89	junction_2	13.9503250947042	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	10003	False	NA	-8	True	AATAAA	-18	NA	131263477	131214229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594
ES.1283.50	chr1	-	156	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	131377673	131377517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131377500_131377700
ES.1283.6	chr1	-	6912	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-1	-1241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	37.7392306149742	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455091	131214229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131422228_131422350_131452675_131453332_131454970
ES.1283.7	chr1	-	6816	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	31	-1241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	37.7392306149742	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455054	131214229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131398595_131398658_131452675_131453332_131454970
ES.1283.8	chr1	-	6849	23	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	826	-1241	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	28.8892513398185	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131454259	131214229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454080
ES.1283.9	chr1	-	6913	24	NNC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	-178	-1241	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	43.1609727093516	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455268	131214229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131217479_131219333_131219429_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131455120
ES.12830.1	chr15	+	5044	2	Intergenic	novelGene_10710	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACATGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	100167981	100173356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100170257_100170587
ES.12830.2	chr15	+	894	1	Intergenic	novelGene_10711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTAGCCGATTCATTT	NA	False	NA	NA	False	NA	NA	NA	100167995	100168889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100168000_100168900
ES.12830.3	chr15	+	1286	5	NNC	ENSMUSG00000045631.11	novel	1362	5	NA	NA	-10713	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22474487139159	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGTTTTTAATGATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	100168004	100190939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100168134_100180112_100180309_100183006_100183276_100187151_100187295_100190390
ES.12830.4	chr15	+	2449	2	NIC	ENSMUSG00000045631.11	novel	1362	5	NA	NA	2662	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGATTTGTTTACTTT	NA	False	NA	NA	False	AATAAA	-27	NA	100181383	100190947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100183276_100190390
ES.12831.1	chr15	-	173	1	Intergenic	novelGene_10712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100180749	100180576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100180600_100180700
ES.12832.1	chr15	-	365	1	Intergenic	novelGene_10713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	100185421	100185056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100185100_100185400
ES.12833.1	chr15	-	177	1	Intergenic	novelGene_10714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	100200507	100200330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100200300_100200500
ES.12834.1	chr15	+	1803	3	NNC	ENSMUSG00000054619.8	novel	449	3	NA	NA	143	-2	intron_retention	FALSE	canonical	0	0	junction_1	9.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGGCTGCATTTGTG	148	False	NA	10	True	AATAAA	-45	NA	100202251	100212234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100202273_100202803_100203226_100210874
ES.12834.2	chr15	+	1899	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	42	5	14	-5	multi-exon	FALSE	canonical	3	19	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCTTGGCTGCATTT	580	False	NA	7	True	AATAAA	-42	NA	100202683	100212231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100203226_100210874
ES.12834.3	chr15	+	937	1	NIC	ENSMUSG00000054619.8	novel	674	3	NA	NA	48	429	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATACTGGTTCTGTGTT	614	False	NA	NA	False	NA	NA	NA	100202717	100203654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100202700_100203700
ES.12835.1	chr15	-	1820	2	Antisense	novelGene_ENSMUSG00000054619.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGATAAATTACTTTT	NA	False	NA	NA	False	CATAAA	-6	NA	100205713	100201755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_100203298_100205435
ES.12836.1	chr15	+	176	1	Intergenic	novelGene_10715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAGCAAAAGCT	6500	False	NA	NA	False	NA	NA	NA	100223699	100223875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100223700_100223900
ES.12837.2	chr15	+	110	2	Intergenic	novelGene_10716	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAATAAATAAATAATACT	8025	False	NA	NA	False	NA	NA	NA	100225224	100229249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100225298_100229212
ES.12838.1	chr15	-	167	1	Intergenic	novelGene_10717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGTATAC	NA	False	NA	NA	False	NA	NA	NA	100254571	100254404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100254400_100254600
ES.12839.1	chr15	+	1087	1	Genic_Genomic	ENSMUSG00000056487.9	novel	NA	NA	NA	NA	7556	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGCTGCATTTGTGTC	6920	False	NA	NA	False	GATAAA	-18	NA	100258636	100259723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_100258600_100259700
ES.1284.1	chr1	-	178	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	3073	False	NA	NA	False	NA	NA	NA	131492329	131492151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131492200_131492300
ES.12840.11	chr15	-	2783	17	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.6394875450769	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTTTGTCTAGGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	100320894	100285782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286362_100286503_100287043_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.12	chr15	-	2811	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9673900485191	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTTTGTCTAGGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	100320894	100285782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310114_100310144_100320842
ES.12840.16	chr15	-	2860	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-22	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.6494941467109	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAAGCTTTTGTCTAGG	NA	False	NA	NA	False	AATAAA	-15	NA	100320905	100285785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286367_100286487_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304166_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.18	chr15	-	2083	17	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-15	-858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.3078945744693	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCAGGTGAGTTAGGTC	NA	False	NA	-2	True	TATAAA	-23	NA	100320898	100286636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301064_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310114_100310144_100320842
ES.12840.19	chr15	-	2161	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	4	860	4	-860	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTCAGGTGAGTTAGG	NA	False	NA	-4	True	TATAAA	-21	NA	100320932	100286638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.21	chr15	-	2189	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-5	-865	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.9419568779629	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCCTTTCAGGTGAG	NA	False	NA	-9	True	TATAAA	-16	NA	100320888	100286643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303452_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100310908_100310982_100320842
ES.12840.22	chr15	-	5025	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-135	-475	-82	475	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAGTCACTTAGTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	100321018	100289968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.23	chr15	-	4387	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-66	94	-13	-94	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGTTTTCTTTCCT	NA	False	NA	-14	True	ATTAAA	-18	NA	100320949	100290537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.24	chr15	-	4286	16	NNC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	24	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.9039680861036	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGTTTTCTTTCCT	NA	False	NA	-14	True	ATTAAA	-18	NA	100320912	100290537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301781_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.26	chr15	-	6050	14	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-18	-95	intron_retention	FALSE	canonical	3	140	junction_13	18.2614153323566	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320901	100290538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.27	chr15	-	4783	15	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	2	-95	intron_retention	FALSE	canonical	1	68	junction_8	32.5827831085996	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320881	100290538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.28	chr15	-	4223	15	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-23	-95	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	54.119859420304	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320906	100290538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.3	chr15	-	2876	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8380244062904	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320906	100285778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286369_100286487_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.30	chr15	-	4127	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	2	286	2	-286	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGGTCCTTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	100320881	100290729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.31	chr15	-	4064	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-49	400	4	-400	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGTCACTGAAAACG	NA	False	NA	NA	False	ATTAAA	-16	NA	100320932	100290843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.32	chr15	-	6369	15	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-14	-400	intron_retention	FALSE	canonical	1	68	junction_7	32.718340360085	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGTCACTGAAAACG	NA	False	NA	NA	False	ATTAAA	-16	NA	100320897	100290843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.33	chr15	-	4251	17	NNC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	4	-401	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	63.3713941281869	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTGTCACTGAAAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	100320932	100290844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100313507_100313696_100320842
ES.12840.34	chr15	-	3965	15	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-23	-401	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	53.822080288025	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTGTCACTGAAAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	100320906	100290844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100320842
ES.12840.36	chr15	-	3161	9	NNC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	2	-403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.6676995953422	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGATTGTCACTGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	100320881	100290846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100293205_100295544_100295699_100297294_100297375_100304204_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.37	chr15	-	3992	16	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-23	-403	combination_of_known_junctions	FALSE	canonical	1	4	junction_14	51.8043327231313	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGATTGTCACTGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	100320906	100290846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310114_100310144_100320842
ES.12840.38	chr15	-	6875	13	NNC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-22	-403	intron_retention	FALSE	canonical	0	0	junction_7	52.2924468733296	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGATTGTCACTGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	100320905	100290846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301781_100303456_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.39	chr15	-	2067	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-49	2397	4	-2397	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTAGCTTAGGCTGTG	NA	False	NA	-2	True	NA	NA	NA	100320932	100292840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.4	chr15	-	2988	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8380244062904	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100321024	100285778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.41	chr15	-	5968	14	NIC	ENSMUSG00000023030.17	novel	4415	16	NA	NA	-17	-2400	intron_retention	FALSE	canonical	1	68	junction_6	33.5430483807682	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTATGTAGCTTAGGCT	NA	False	NA	-5	True	NA	NA	NA	100320900	100292843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.42	chr15	-	1828	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	-23	2610	-23	2421	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGTGTTTCTATGGT	NA	False	NA	NA	False	AGTAAA	-40	NA	100320906	100293053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.5	chr15	-	8976	17	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-21	0	intron_retention	TRUE	canonical	0	0	junction_1	50.9631837089285	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320904	100285778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286319_100286443_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.6	chr15	-	2917	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8380244062904	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	False	NA	NA	False	AATAAA	-22	NA	100320974	100285778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286362_100286507_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.7	chr15	-	2727	16	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.5372328443068	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTTTGTCTAGGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	100320906	100285782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286319_100286443_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ES.12840.9	chr15	-	2736	18	NNC	ENSMUSG00000023030.17	novel	3025	17	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.3274102799058	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTTTGTCTAGGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	100320877	100285782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100286369_100286487_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301781_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310114_100310144_100320842
ES.12841.1	chr15	+	2648	9	FSM	ENSMUSG00000037353.10	ENSMUST00000229648.2	1222	9	-338	-1088	-254	0	multi-exon	FALSE	canonical	3	74	junction_1	16.3587705833904	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2081	False	NA	26	True	AGTAAA	-15	NA	100366649	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.10	chr15	+	2583	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	-82	1	-82	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2253	False	NA	26	True	AGTAAA	-15	NA	100366821	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.11	chr15	+	2347	7	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-43	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	45.8099940575804	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	2292	False	NA	28	True	AGTAAA	-17	NA	100366860	100377046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100367127_100367565_100367718_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.12	chr15	+	1548	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	-27	981	-27	56	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTGTTCCTTTTT	2308	False	NA	NA	False	NA	NA	NA	100366876	100376064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.13	chr15	+	2607	10	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.998597059564	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2315	False	NA	26	True	AGTAAA	-15	NA	100366883	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374240_100374434_100374670_100374768_100375656
ES.12841.15	chr15	+	2483	9	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	34.6858670786821	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAATTACTTATGCAC	2351	False	NA	30	True	AGTAAA	-19	NA	100366919	100377048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373192_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.16	chr15	+	1758	9	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	12	5803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.2975786747612	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGAGTTCTGGGTC	2359	False	NA	NA	False	ATTAAA	-15	NA	100366927	100382848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100382072
ES.12841.17	chr15	+	2419	9	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	36.4039832985348	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2363	False	NA	26	True	AGTAAA	-15	NA	100366931	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375603
ES.12841.18	chr15	+	2349	9	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	31.2747402067547	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2374	False	NA	26	True	AGTAAA	-15	NA	100366942	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373192_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.19	chr15	+	4810	5	NIC	ENSMUSG00000037353.10	novel	2917	7	NA	NA	3	1	intron_retention	FALSE	canonical	3	29	junction_1	36.4648803645371	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	2375	False	NA	28	True	AGTAAA	-17	NA	100366943	100377046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382
ES.12841.2	chr15	+	2736	10	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.7154632388575	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2088	False	NA	26	True	AGTAAA	-15	NA	100366656	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373176_100373289_100373382_100373536_100373913_100373999_100374670_100374768_100375656
ES.12841.20	chr15	+	3634	7	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-3	1	intron_retention	FALSE	canonical	3	81	junction_1	13.3593496182345	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	2416	False	NA	28	True	AGTAAA	-17	NA	100366984	100377046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100367718_100369540_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.22	chr15	+	2744	7	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	29	junction_1	32.1942886584286	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2416	False	NA	27	True	AGTAAA	-16	NA	100366984	100377045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.23	chr15	+	2843	8	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	39.7374033435729	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2425	False	NA	27	True	AGTAAA	-16	NA	100366993	100377045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367718_100369548_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.24	chr15	+	2901	8	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_7	38.4102452319106	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2427	False	NA	26	True	AGTAAA	-15	NA	100366995	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375603
ES.12841.25	chr15	+	3035	9	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	47.4710438056717	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2428	False	NA	27	True	AGTAAA	-16	NA	100366996	100377045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372596_100372784_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.26	chr15	+	2276	8	NNC	ENSMUSG00000037353.10	novel	2266	8	NA	NA	528	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.4656994404453	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2985	False	NA	26	True	AGTAAA	-15	NA	100367553	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367718_100369548_100369657_100370429_100370513_100372903_100373091_100373192_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.27	chr15	+	3419	7	ISM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	1344	1	1222	0	3prime_fragment	FALSE	canonical	3	98	junction_1	7.80313327381308	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	3679	False	NA	26	True	AGTAAA	-15	NA	100368247	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.28	chr15	+	6031	2	FSM	ENSMUSG00000037353.10	ENSMUST00000229457.2	630	2	-568	-4833	-568	1452	multi-exon	FALSE	canonical	3	115	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	7804	False	NA	NA	False	NA	NA	NA	100372372	100378497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100373289_100373382
ES.12841.29	chr15	+	1968	6	NNC	ENSMUSG00000037353.10	novel	497	2	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.7135954514315	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	8209	False	NA	26	True	AGTAAA	-15	NA	100372777	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100372819_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.3	chr15	+	2633	9	NNC	ENSMUSG00000037353.10	novel	1222	9	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.8582883923719	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2088	False	NA	26	True	AGTAAA	-15	NA	100366656	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367020_100367565_100367718_100369548_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.30	chr15	+	2610	2	FSM	ENSMUSG00000037353.10	ENSMUST00000229372.2	497	2	-1077	-1036	605	0	multi-exon	FALSE	canonical	3	112	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	8977	False	NA	26	True	AGTAAA	-15	NA	100373545	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100374768_100375656
ES.12841.31	chr15	+	2348	3	NNC	ENSMUSG00000037353.10	novel	497	2	NA	NA	630	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	9002	False	NA	26	True	AGTAAA	-15	NA	100373570	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100374434_100374670_100374768_100375656
ES.12841.32	chr15	+	5270	3	Antisense	novelGene_ENSMUSG00000044636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100379517	100389735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_100380580_100382328_100382623_100385821
ES.12841.33	chr15	+	4040	4	Antisense	novelGene_ENSMUSG00000044636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100379517	100389735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_100380580_100382328_100382623_100385821_100386086_100387315
ES.12841.4	chr15	+	3166	8	NIC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-224	1	intron_retention	FALSE	canonical	3	81	junction_1	12.9362644830535	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	2111	False	NA	28	True	AGTAAA	-17	NA	100366679	100377046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.5	chr15	+	1694	9	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-224	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.470475349321	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTTTTTTGTGTGTTC	2111	False	NA	NA	False	NA	NA	NA	100366679	100376058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370476_100372911_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.6	chr15	+	4971	7	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-213	0	intron_retention	FALSE	canonical	3	19	junction_3	34.9364502426271	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2122	False	NA	27	True	AGTAAA	-16	NA	100366690	100377045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100369657_100370429_100370513_100372903_100373091_100373192_100373289_100373382_100373536_100374670_100374768_100375656
ES.12841.7	chr15	+	2765	9	NNC	ENSMUSG00000037353.10	novel	2502	9	NA	NA	-211	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	39.2420374088808	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2124	False	NA	26	True	AGTAAA	-15	NA	100366692	100377044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375603
ES.12841.8	chr15	+	1918	1	Genic_Genomic	ENSMUSG00000037353.10	novel	NA	NA	NA	NA	-145	560	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGAATCTTACTCTAA	2190	False	NA	NA	False	AATAAA	-19	NA	100366758	100368676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_100366800_100368700
ES.12841.9	chr15	+	2414	8	FSM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	-153	5	-141	-5	multi-exon	FALSE	canonical	3	29	junction_2	31.1808418417333	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTCTGGGAATTA	2194	False	NA	21	True	AGTAAA	-10	NA	100366762	100377039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100367020_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ES.12842.1	chr15	-	4092	5	Genic_Genomic	ENSMUSG00000097827.2	novel	2312	2	NA	NA	-6908	-5873	multi-exon	TRUE	non_canonical	0	0	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	100373480	100363493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_100364966_100365210_100367136_100367516_100367920_100369632_100369863_100373418
ES.12843.1	chr15	-	2051	6	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	223	3579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.8621787609308	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGTAGTGGTAGTG	NA	False	NA	NA	False	AAAAAG	-32	NA	100393146	100373871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100374761_100380440_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
ES.12843.2	chr15	-	4198	5	FSM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	177	0	177	0	multi-exon	FALSE	canonical	3	12	junction_4	9.28372231381357	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGTTCTTTATCTT	NA	False	NA	2	True	ATTAAA	-17	NA	100393192	100377450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
ES.12843.3	chr15	-	8035	3	ISM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	2937	0	2937	0	intron_retention	FALSE	canonical	3	34	junction_2	0.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGTTCTTTATCTT	NA	False	NA	2	True	ATTAAA	-17	NA	100390432	100377450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_100380582_100382330_100382628_100385825
ES.12843.4	chr15	-	3595	3	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	8894	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTGGGTTCTTTATC	NA	False	NA	0	True	ATTAAA	-15	NA	100384475	100377452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100380582_100382330_100382628_100384306
ES.12843.5	chr15	-	3982	5	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	797	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.4113670413323	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTGGGTTCTTTATC	NA	False	NA	0	True	ATTAAA	-15	NA	100392572	100377452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392508
ES.12843.6	chr15	-	4043	6	NNC	ENSMUSG00000044636.7	novel	4375	5	NA	NA	227	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.8621787609308	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGTGTGGGTTCTTTA	NA	False	NA	-2	True	ATTAAA	-13	NA	100393142	100377454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100380582_100382330_100382628_100385825_100385926_100386026_100386086_100387315_100387548_100392914
ES.12844.1	chr15	-	3206	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	49	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	31.0376115919594	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGGTTTCTAATTTCT	NA	False	NA	42	True	ATTAAA	-10	NA	100449813	100400635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410101_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.10	chr15	-	3053	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.1118788059897	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449848	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402322_100404086_100404139_100410101_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.11	chr15	-	3406	16	NIC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	31.0049458420212	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449709	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449456
ES.12844.13	chr15	-	5175	13	NIC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	46	-1	intron_retention	FALSE	canonical	2	10	junction_9	29.2555787652353	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449609	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ES.12844.14	chr15	-	3232	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	37.235941053268	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449646	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449460
ES.12844.15	chr15	-	4079	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	6	junction_12	29.7029511349032	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449864	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425830_100426275_100426428_100449205_100449363_100449790
ES.12844.18	chr15	-	3216	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.3846452450356	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTGGTTCTTGTTGC	NA	False	NA	-1	True	AATAAA	-20	NA	100449863	100400678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418452_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.19	chr15	-	3126	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	30.3995614003448	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTTTGGTTCTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	100449847	100400679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426346_100449205_100449363_100449790
ES.12844.2	chr15	-	3169	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.9849370909578	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449880	100400676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418629_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.20	chr15	-	3157	14	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-3069	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	38.3435112120813	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTTTGGTTCTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	100452958	100400679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100452688
ES.12844.21	chr15	-	3172	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	36.7595187974791	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTGGTTCTTGTT	NA	False	NA	-3	True	AATAAA	-18	NA	100449847	100400680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426396_100449205_100449363_100449790
ES.12844.22	chr15	-	5084	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	16	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	31.3691808978826	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGTTTTTGGTTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	100449846	100400681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411912_100412004_100412684_100412734_100415830_100415920_100416450_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.25	chr15	-	3242	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	37.846825787934	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGTTTTTGGTTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	100449870	100400681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410101_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449388_100449790
ES.12844.26	chr15	-	3141	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	10611	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	37.7741002945302	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGAGTTTTTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	100438821	100400682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425830_100426275_100426428_100438666
ES.12844.28	chr15	-	2847	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	15	-377	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	37.846825787934	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTTTATGTTCTGC	NA	False	NA	NA	False	ATTAAA	-35	NA	100449847	100401053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410101_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449388_100449790
ES.12844.3	chr15	-	3431	15	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	25	0	intron_retention	TRUE	canonical	0	0	junction_12	30.8952311226579	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449630	100400676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425748_100425835_100426275_100426428_100449205
ES.12844.31	chr15	-	2882	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	-8	428	-8	-379	multi-exon	FALSE	canonical	3	68	junction_1	18.9415475139235	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGTGTTTATGTTCT	NA	False	NA	NA	False	ATTAAA	-33	NA	100449897	100401055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.32	chr15	-	2820	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	14	-380	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	31.0376115919594	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACACTGTGTTTATGTTC	NA	False	NA	NA	False	ATTAAA	-32	NA	100449848	100401056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410101_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.34	chr15	-	1774	15	NIC	ENSMUSG00000009733.10	novel	1903	14	NA	NA	9	87	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	28.3085225502779	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGGTGGTGGCACATG	NA	False	NA	NA	False	AATAAA	-14	NA	100449880	100407325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100407556_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.35	chr15	-	1671	15	NIC	ENSMUSG00000009733.10	novel	1903	14	NA	NA	9	-16	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	28.3085225502779	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATCTTTATGCTTGAA	NA	False	NA	NA	False	ATTAAA	-24	NA	100449880	100407428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100407556_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.38	chr15	-	403	3	NNC	ENSMUSG00000009733.10	novel	371	2	NA	NA	12	-389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTGTATCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	100449850	100444335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100444522_100449205_100449363_100449790
ES.12844.4	chr15	-	3252	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	1	49	1	0	multi-exon	FALSE	canonical	3	68	junction_1	18.9415475139235	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449888	100400676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.5	chr15	-	3239	17	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.093173190875	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449839	100400676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100404383_100404420_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.7	chr15	-	3189	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	35.4567655352575	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449863	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402322_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420343_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.8	chr15	-	3103	15	NIC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	28.9275132081581	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449847	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ES.12844.9	chr15	-	3236	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	29.783664426438	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTTCTTGTTGCT	NA	False	NA	0	True	AATAAA	-21	NA	100449848	100400677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449388_100449790
ES.12845.1	chr15	-	6788	1	Intergenic	novelGene_10718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATACGACTTGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	100462990	100456202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100456200_100463000
ES.12846.1	chr15	+	178	1	Intergenic	novelGene_10719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAAGGGTTGTA	3577	False	NA	NA	False	NA	NA	NA	100464779	100464957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100464800_100465000
ES.12847.1	chr15	+	3972	2	Antisense	novelGene_ENSMUSG00000009739.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGAGCATGGAAAGGT	3801	False	NA	NA	False	NA	NA	NA	100473596	100477666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_100476913_100477010
ES.12848.1	chr15	-	5076	11	NIC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-117	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	17.0833252032501	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGCCTATTTTGTTGC	NA	False	NA	1	True	AATAAA	-22	NA	100497982	100473197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100497643
ES.12848.10	chr15	-	3221	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	35	398	35	-398	multi-exon	FALSE	canonical	3	66	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGCGCTCGATGGCTT	8541	False	NA	NA	False	AAAAAG	-42	NA	100478077	100473599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100476500_100477756
ES.12848.11	chr15	-	2825	3	NNC	ENSMUSG00000009739.18	novel	801	3	NA	NA	-1546	2619	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTCAGAGCAGTGA	9467	False	NA	NA	False	ATTAAA	-11	NA	100485792	100481552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100482902_100483300_100484654_100485669
ES.12848.2	chr15	-	5215	9	NIC	ENSMUSG00000009739.18	novel	2776	10	NA	NA	1005	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	18.1865334794732	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	3349	False	NA	0	True	AATAAA	-21	NA	100491910	100473198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484654_100485669_100485792_100489721_100489915_100491853
ES.12848.3	chr15	-	5956	11	NNC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-868	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	17.5900540078762	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	1476	False	NA	0	True	AATAAA	-21	NA	100493783	100473198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100492563
ES.12848.4	chr15	-	3565	3	NNC	ENSMUSG00000009739.18	novel	4575	6	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	8475	False	NA	0	True	AATAAA	-21	NA	100478143	100473198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100476500_100477756_100477926_100478048
ES.12848.6	chr15	-	5614	10	NNC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.7109263648837	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCTGCCTATTTTGTT	NA	False	NA	-1	True	AATAAA	-20	NA	100497891	100473199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100476500_100477756_100477945_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484751_100485669_100485792_100489721_100489915_100491853_100491947_100497643
ES.12848.7	chr15	-	3735	4	NNC	ENSMUSG00000009739.18	novel	736	5	NA	NA	1565	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	30.2140511829991	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTCTGCCTATTTTGT	6090	False	NA	-2	True	AATAAA	-19	NA	100480528	100473200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100476500_100477756_100477926_100478690_100478833_100480403
ES.12848.8	chr15	-	4349	11	NNC	ENSMUSG00000009739.18	novel	2776	10	NA	NA	986	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5900540078762	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTCTGCCTATTTTGT	3330	False	NA	-2	True	AATAAA	-19	NA	100491929	100473200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100474032_100474399_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485792_100489721_100489915_100491853
ES.12848.9	chr15	-	5681	10	NIC	ENSMUSG00000009739.18	novel	4953	11	NA	NA	-71	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.395517435734	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTCTGCCTATTTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	100497936	100473200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483616_100484654_100485669_100485792_100489721_100489915_100491853_100491947_100497643
ES.12849.1	chr15	+	3168	3	ISM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	158	6	158	-6	intron_retention	FALSE	canonical	0	0	junction_1	674.5	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACGCCAGCATTCTTT	NA	False	NA	12	True	AATAAA	-43	NA	100513387	100518636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100513606_100514793_100514913_100515805
ES.12849.10	chr15	+	2458	2	ISM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	282	1485	282	-172	intron_retention	FALSE	canonical	0	0	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGATTGGCACATTGC	NA	False	NA	NA	False	NA	NA	NA	100513511	100517157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100513606_100514793
ES.12849.12	chr15	+	1701	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	-286	-30	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	635.924698547102	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGATGAAGTTGCA	NA	False	NA	-12	True	AATAAA	-19	NA	100513528	100518612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100513606_100514793_100514913_100515805_100515983_100517284
ES.12849.14	chr15	+	951	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	299	885	-286	428	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTCTTTAATCTCCTTA	NA	False	NA	7	True	ATTAAA	-18	NA	100513528	100517757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ES.12849.15	chr15	+	2699	2	NIC	ENSMUSG00000000346.10	novel	751	3	NA	NA	-249	-172	intron_retention	FALSE	canonical	3	1349	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGATTGGCACATTGC	NA	False	NA	NA	False	NA	NA	NA	100513565	100517157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100514913_100515805
ES.12849.17	chr15	+	1583	1	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	1	541	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAAGAATGGACTCATG	NA	False	NA	NA	False	NA	NA	NA	100513815	100515398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100513800_100515400
ES.12849.18	chr15	+	1147	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	-56	427	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTCTTTAATCTCCTT	NA	False	NA	6	True	ATTAAA	-17	NA	100513929	100517756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
ES.12849.19	chr15	+	2030	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	-54	-1	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCAGCATTCTTTACTTA	NA	False	NA	17	True	AATAAA	-24	NA	100513931	100518641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
ES.12849.2	chr15	+	4348	2	NIC	ENSMUSG00000000346.10	novel	751	3	NA	NA	169	-3	intron_retention	FALSE	canonical	3	1349	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCAGCATTCTTTACT	NA	False	NA	15	True	AATAAA	-22	NA	100513398	100518639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100514913_100515805
ES.12849.20	chr15	+	1874	4	FSM	ENSMUSG00000000346.10	ENSMUST00000229424.2	542	4	-49	-1283	-49	-30	multi-exon	FALSE	canonical	3	12	junction_1	563.556760426332	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGATGAAGTTGCA	NA	False	NA	-12	True	AATAAA	-19	NA	100513936	100518612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100514082_100514793_100514913_100515805_100516052_100517248
ES.12849.3	chr15	+	1930	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	218	-13	218	13	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAGCATGTGCTCAGAT	NA	False	NA	31	True	AATAAA	-38	NA	100513447	100518655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ES.12849.4	chr15	+	1860	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	268	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	569.007518013212	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCAGCATTCTTTACTTA	NA	False	NA	17	True	AATAAA	-24	NA	100513497	100518641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100513600_100514793_100514913_100515805_100516052_100517248
ES.12849.5	chr15	+	3016	3	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	277	-30	intron_retention	FALSE	canonical	3	978	junction_2	185.5	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTGATGAAGTTGCA	NA	False	NA	-12	True	AATAAA	-19	NA	100513506	100518612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100514913_100515805_100516052_100517248
ES.12849.6	chr15	+	1570	3	ISM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	277	1485	277	-172	5prime_fragment	FALSE	canonical	0	0	junction_1	674.5	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGATTGGCACATTGC	NA	False	NA	NA	False	NA	NA	NA	100513506	100517157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100513606_100514793_100514913_100515805
ES.12849.7	chr15	+	3647	1	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	281	-172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGATTGGCACATTGC	NA	False	NA	NA	False	NA	NA	NA	100513510	100517157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100513500_100517200
ES.12849.8	chr15	+	1724	3	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	282	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	489	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACCTCACGCCAGCATT	NA	False	NA	8	True	AATAAA	-39	NA	100513511	100518632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100513606_100515805_100516052_100517248
ES.1285.1	chr1	-	162	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	131623932	131623770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131623800_131623900
ES.12850.1	chr15	+	257	1	Antisense	novelGene_ENSMUSG00000098112.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCTGGGCTCCAAGG	NA	False	NA	NA	False	ATTAAA	-9	NA	100542277	100542534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_100542300_100542500
ES.12851.1	chr15	-	2920	2	Fusion	ENSMUSG00000097093.3_ENSMUSG00000116164.2	novel	881	2	NA	NA	-38	4800	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	100513029	100506253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_100506466_100510321
ES.12851.10	chr15	-	859	3	FSM	ENSMUSG00000053559.14	ENSMUST00000229307.2	527	3	18	-350	18	-7	multi-exon	FALSE	canonical	3	21	junction_2	362	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAGATTTTCATTTTC	NA	False	NA	-14	True	ATTAAA	-7	NA	100533363	100519249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100519908_100520509_100520591_100533243
ES.12851.11	chr15	-	2782	4	NNC	ENSMUSG00000098112.9	novel	1901	10	NA	NA	5767	2432	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.1265752256556	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCTGGAGAAA	9151	False	NA	NA	False	NA	NA	NA	100542833	100536525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100537409_100537645_100539184_100539224_100539446_100542693
ES.12851.12	chr15	-	200	1	Intergenic	novelGene_10720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100537642	100537442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100537400_100537600
ES.12851.13	chr15	-	1972	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	-10	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.499419626636	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTTGCCCTGAACAG	NA	False	NA	-2	True	AATAAA	-20	NA	100567418	100538960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100539184_100539228_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ES.12851.14	chr15	-	2031	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	-37	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.499419626636	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTTGCCCTGAACAG	NA	False	NA	-2	True	AATAAA	-20	NA	100567471	100538960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100539184_100539222_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ES.12851.17	chr15	-	2056	11	FSM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	-28	8	-28	-2	multi-exon	FALSE	canonical	2	83	junction_1	21.2593508837876	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGAGGTGTCTTGCCCTG	NA	False	NA	-7	True	AATAAA	-15	NA	100567462	100538965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ES.12851.2	chr15	-	3406	4	Fusion	ENSMUSG00000097093.3_ENSMUSG00000116164.2_ENSMUSG00000053559.14	novel	881	2	NA	NA	-74	1531	multi-exon	FALSE	canonical	3	9	junction_1	309.464411883212	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGATTTTTCTAGATTTA	NA	False	NA	NA	False	NA	NA	NA	100534646	100509522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_100512572_100520509_100520591_100534067_100534137_100534439
ES.12851.25	chr15	-	3579	12	NNC	ENSMUSG00000098112.9	novel	2036	11	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	57.2126669208694	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGAGGTGTCTTGCCCT	NA	False	NA	-8	True	AATAAA	-14	NA	100567385	100538966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100539184_100539224_100539446_100542693_100543421_100546960_100547044_100548080_100549321_100549361_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ES.12851.27	chr15	-	2872	10	ISM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	12	2400	12	1162	5prime_fragment	FALSE	canonical	3	125	junction_1	11.4643839243734	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTATTTTTTTTTATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	100567422	100541357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ES.12851.3	chr15	-	2262	5	NNC	ENSMUSG00000053559.14	novel	920	4	NA	NA	-3546	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	309.884655960891	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTACATCATTTTC	NA	False	NA	1	True	ACTAAA	-19	NA	100538367	100519201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629_100535745_100538076
ES.12851.4	chr15	-	1570	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	-419	-16	-334	16	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTTTTTACATCATTT	NA	False	NA	-1	True	ACTAAA	-17	NA	100535155	100519203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
ES.12851.6	chr15	-	1088	4	FSM	ENSMUSG00000053559.14	ENSMUST00000230280.2	880	4	-195	-13	-22	-10	multi-exon	FALSE	canonical	3	57	junction_1	291.611994875992	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTAAATTTTTCCTTG	NA	False	NA	6	True	ATTAAA	-27	NA	100534767	100519229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534439
ES.12851.7	chr15	-	1187	4	FSM	ENSMUSG00000053559.14	ENSMUST00000229965.2	586	4	-323	-278	-247	1	multi-exon	FALSE	canonical	3	57	junction_1	287.836759292485	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCATTTTCAAGAACTA	NA	False	NA	-6	True	ATTAAA	-15	NA	100535068	100519241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534629
ES.12851.8	chr15	-	2177	3	NIC	ENSMUSG00000053559.14	novel	920	4	NA	NA	-567	1	intron_retention	FALSE	canonical	3	417	junction_2	172.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCATTTTCAAGAACTA	NA	False	NA	-6	True	ATTAAA	-15	NA	100535388	100519241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100520591_100534067_100534137_100534629
ES.12851.9	chr15	-	1273	3	NIC	ENSMUSG00000053559.14	novel	920	4	NA	NA	-334	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	372.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCATTTTCAAGAACTA	NA	False	NA	-6	True	ATTAAA	-15	NA	100535155	100519241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100519908_100520509_100520591_100534629
ES.12852.1	chr15	+	179	1	Intergenic	novelGene_10721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAAAAAAATAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	100569082	100569261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100569100_100569300
ES.12853.1	chr15	+	186	1	Intergenic	novelGene_10722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAATAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	100581862	100582048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100581900_100582000
ES.12854.1	chr15	-	746	4	FSM	ENSMUSG00000023031.9	ENSMUST00000229235.2	456	4	-89	-201	-89	-1	multi-exon	FALSE	canonical	3	11	junction_3	10.8730042868667	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGCTTGCATTTATA	5865	False	NA	0	True	AATAAA	-18	NA	100581089	100572303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580934
ES.12854.2	chr15	-	1037	6	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	2605	2	48	-1	3prime_fragment	FALSE	canonical	2	9	junction_4	10.6695829346793	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGCTTGCATTTATA	8490	False	NA	0	True	AATAAA	-18	NA	100583197	100572303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014
ES.12855.1	chr15	-	5692	12	NNC	ENSMUSG00000037280.13	novel	3796	12	NA	NA	-60	1897	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.9471475360673	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAACCTCGTGCCTTCC	1614	False	NA	NA	False	AATAAA	-18	NA	100618418	100587796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618349
ES.12855.12	chr15	-	3774	10	NNC	ENSMUSG00000037280.13	novel	3798	12	NA	NA	4281	0	intron_retention	FALSE	canonical	0	0	junction_4	36.8734907621675	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATGTTGGATTTGAG	5955	False	NA	-9	True	AATAAA	-17	NA	100614077	100589695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100591348_100592450_100592604_100594427_100595132_100595658_100595860_100596126_100596246_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808
ES.12855.13	chr15	-	2442	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-34	338	-34	-338	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGTCCCATTTT	1640	False	NA	NA	False	NA	NA	NA	100618392	100591082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
ES.12855.14	chr15	-	172	1	Intergenic	novelGene_10723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAATTATTATTTTGT	3089	False	NA	NA	False	NA	NA	NA	100616943	100616771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100616800_100616900
ES.12855.2	chr15	-	3867	12	FSM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	-66	-1055	-66	4	multi-exon	FALSE	canonical	3	77	junction_7	8.71021059418435	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGATTTGAGTTCCTC	1608	False	NA	-3	True	AATAAA	-23	NA	100618424	100589689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
ES.12855.4	chr15	-	4387	8	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	14578	-1054	14578	3	3prime_fragment	FALSE	canonical	3	77	junction_7	6.94585473208184	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	NA	False	NA	-4	True	AATAAA	-22	NA	100603780	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991
ES.12855.5	chr15	-	3802	12	FSM	ENSMUSG00000037280.13	ENSMUST00000052069.12	3798	12	1	-5	1	3	multi-exon	FALSE	canonical	2	3	junction_11	26.1268362081583	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	9876	False	NA	-4	True	AATAAA	-22	NA	100627256	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100627183
ES.12855.6	chr15	-	3903	13	NNC	ENSMUSG00000037280.13	novel	2746	12	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.0485764101167	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1664	False	NA	-4	True	AATAAA	-22	NA	100618368	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100600046_100600140_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
ES.12855.7	chr15	-	3917	13	NNC	ENSMUSG00000037280.13	novel	3796	12	NA	NA	-220	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	34.191759078598	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1454	False	NA	-4	True	AATAAA	-22	NA	100618578	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618349_100618413_100618453
ES.12855.8	chr15	-	4315	11	NIC	ENSMUSG00000037280.13	novel	2746	12	NA	NA	-45	3	intron_retention	FALSE	canonical	3	77	junction_6	8.46404158779953	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	1629	False	NA	-4	True	AATAAA	-22	NA	100618403	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_100591348_100592450_100592604_100594427_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100618287
ES.12855.9	chr15	-	4299	2	ISM	ENSMUSG00000037280.13	ENSMUST00000161514.2	2746	12	23266	-1054	23266	3	intron_retention	FALSE	canonical	3	85	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGATTTGAGTTCCT	4919	False	NA	-4	True	AATAAA	-22	NA	100595092	100589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_100591348_100592450
ES.12856.1	chr15	+	173	1	Intergenic	novelGene_10724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAACAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	100632609	100632782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100632600_100632800
ES.12857.1	chr15	+	3790	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	5	7995	5	38	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGTCCATTCTGTCACA	NA	False	NA	49	True	NA	NA	NA	100659632	100713854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.11	chr15	+	2841	17	NNC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	34	-5011	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	9.96850509103547	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACCTGCAGAGTCGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	100659661	100699159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633
ES.12857.12	chr15	+	4968	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	39	6783	39	1155	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTCTGGAATGTGG	NA	False	NA	NA	False	NA	NA	NA	100659666	100715066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.13	chr15	+	4234	23	NIC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	-37	776	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	11.1362708715988	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGTGTAGACCTCCCC	NA	False	NA	NA	False	NA	NA	NA	100659712	100714687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.14	chr15	+	4264	25	NNC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.64653075232519	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACATTTTCTCTGATAC	NA	False	NA	9	True	ATTAAA	-17	NA	100659712	100713814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.15	chr15	+	4354	24	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-1559	775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0864873227668	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAAGTGTAGACCTCCC	2956	False	NA	NA	False	NA	NA	NA	100677575	100714686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100677599_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705348_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.16	chr15	+	4280	24	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-1051	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.2488876246417	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	3464	False	NA	11	True	ATTAAA	-19	NA	100678083	100713816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100678323_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.17	chr15	+	4488	26	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-1017	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.3545950831084	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	3498	False	NA	12	True	ATTAAA	-20	NA	100678117	100713817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100678323_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633_100698687_100698814_100699003_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.18	chr15	+	3679	24	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-1006	38	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.13643695054198	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGTCCATTCTGTCACA	3509	False	NA	49	True	NA	NA	NA	100678128	100713854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100678323_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.19	chr15	+	4550	24	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	-278	647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	11.3439107021743	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGGCTCAGGTGTAA	4237	False	NA	NA	False	NA	NA	NA	100678856	100714558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694387_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.2	chr15	+	4625	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	5	7160	5	778	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTAGACCTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	100659632	100714689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.20	chr15	+	3840	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	-273	-35	-273	35	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACGAGTCCATTCTGTC	4242	False	NA	46	True	NA	NA	NA	100678861	100713851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.21	chr15	+	4632	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	-229	-871	-229	776	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGTGTAGACCTCCCC	4286	False	NA	NA	False	NA	NA	NA	100678905	100714687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.22	chr15	+	7814	23	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	-229	1	intron_retention	FALSE	canonical	0	0	junction_12	13.9394351119287	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	4286	False	NA	12	True	ATTAAA	-20	NA	100678905	100713817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694000_100694077_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.23	chr15	+	4133	24	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	2532	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.0925914655716	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	7047	False	NA	11	True	ATTAAA	-19	NA	100681666	100713816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633_100698687_100698814_100699003_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.24	chr15	+	6084	19	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	6013	0	intron_retention	FALSE	canonical	3	11	junction_17	9.45293735784587	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	516	False	NA	11	True	ATTAAA	-19	NA	100685147	100713816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.25	chr15	+	7715	16	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	7614	777	intron_retention	FALSE	canonical	3	11	junction_14	9.98576764978815	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGTAGACCTCCCCT	2117	False	NA	NA	False	NA	NA	NA	100686748	100714688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.26	chr15	+	6184	17	NIC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	7760	775	intron_retention	FALSE	canonical	3	26	junction_4	7.48096542900714	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAAGTGTAGACCTCCC	2263	False	NA	NA	False	NA	NA	NA	100686894	100714686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.27	chr15	+	5176	17	NNC	ENSMUSG00000023032.13	novel	641	2	NA	NA	7935	-6	intron_retention	FALSE	canonical	0	0	junction_1	13.8918816220122	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGACATTTTCTCTG	2438	False	NA	5	True	ATTAAA	-13	NA	100687069	100713810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100687095_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710990_100711080_100712330_100712427_100713499
ES.12857.28	chr15	+	3316	17	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	8607	755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.5810661750117	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCATGAGTTTTTTGGCC	3110	False	NA	NA	False	TTTAAA	-31	NA	100687741	100714666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100687804_100688786_100688934_100689477_100689579_100693718_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.29	chr15	+	2360	16	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	9175	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.4360659460949	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACATTTTCTCTGATAC	3678	False	NA	9	True	ATTAAA	-17	NA	100688309	100713814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100688368_100688786_100688934_100689477_100689579_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.3	chr15	+	11776	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	13	1	13	-1	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTTCTGTGCTGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	100659640	100721848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.30	chr15	+	2533	16	ISM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	9598	0	9598	0	3prime_fragment	FALSE	canonical	3	26	junction_2	7.86271086980961	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	4101	False	NA	11	True	ATTAAA	-19	NA	100688732	100713816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.31	chr15	+	4965	17	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	10407	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.8795524311357	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGACATTTTCTCTG	4910	False	NA	5	True	ATTAAA	-13	NA	100689541	100713810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100689579_100693643_100693819_100694000_100694077_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633_100701230_100704130_100704293_100704657_100704803_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.32	chr15	+	6097	13	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	-6986	0	intron_retention	FALSE	canonical	1	2	junction_5	14.3204884305281	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	9011	False	NA	11	True	ATTAAA	-19	NA	100693642	100713816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633_100701230_100704130_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711674_100712330_100712427_100713499
ES.12857.34	chr15	+	5032	8	NIC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	-1502	751	intron_retention	FALSE	canonical	3	30	junction_2	8.76682056718072	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATCATGAGTTTTTT	3314	False	NA	NA	False	TTTAAA	-27	NA	100699126	100714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100701230_100704130_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.35	chr15	+	2389	10	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-1304	775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.727986293004	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAAGTGTAGACCTCCC	3512	False	NA	NA	False	NA	NA	NA	100699324	100714686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100699436_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.36	chr15	+	4444	7	NIC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	-508	1	intron_retention	FALSE	canonical	3	30	junction_2	9.0921211313239	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	4308	False	NA	12	True	ATTAAA	-20	NA	100700120	100713817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100701230_100704130_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100712427_100713499
ES.12857.37	chr15	+	3130	8	NIC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	17	1	intron_retention	FALSE	canonical	3	30	junction_3	9.11603207631075	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	4833	False	NA	12	True	ATTAAA	-20	NA	100700645	100713817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100712427_100713499
ES.12857.38	chr15	+	2733	10	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	114	751	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	16.2784413971666	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATCATGAGTTTTTT	4930	False	NA	NA	False	TTTAAA	-27	NA	100700742	100714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100711567_100711674_100712330_100712427_100713499
ES.12857.39	chr15	+	1763	10	NNC	ENSMUSG00000023032.13	novel	3532	24	NA	NA	236	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	16.2784413971666	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACATTTTCTCTGATAC	5052	False	NA	9	True	ATTAAA	-17	NA	100700864	100713814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100711567_100711674_100712330_100712427_100713499
ES.12857.4	chr15	+	3946	26	NNC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.9289752107427	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACATTTTCTCTGATAC	NA	False	NA	9	True	ATTAAA	-17	NA	100659641	100713814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100659856_100672510_100672593_100680826_100681022_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100711513_100711674_100712330_100712427_100713499
ES.12857.40	chr15	+	2391	2	FSM	ENSMUSG00000023032.13	ENSMUST00000162744.2	374	2	-633	-1384	-633	1154	multi-exon	FALSE	canonical	3	53	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCTCTGGAATGTG	NA	False	NA	NA	False	NA	NA	NA	100711601	100715065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_100712427_100713499
ES.12857.41	chr15	+	3844	1	ISM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	53912	4466	1305	3472	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTGCCTCATCCATGA	NA	False	NA	NA	False	NA	NA	NA	100713539	100717383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100713500_100717400
ES.12857.5	chr15	+	6782	26	NNC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	14	755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	13.504014218002	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCATGAGTTTTTTGGCC	NA	False	NA	NA	False	TTTAAA	-31	NA	100659641	100714666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100698633_100700811_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711092_100712330_100712427_100713499
ES.12857.6	chr15	+	3952	26	NNC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	12.3515181253156	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGACATTTTCTCTGA	NA	False	NA	6	True	ATTAAA	-14	NA	100659642	100713811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698587_100698851_100699003_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12857.7	chr15	+	1906	1	NIC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	15	-11296	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATAAAGGAAATGTGTC	NA	False	NA	NA	False	NA	NA	NA	100659642	100661548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100659600_100661500
ES.12857.9	chr15	+	6326	24	NIC	ENSMUSG00000023032.13	novel	11790	25	NA	NA	25	1	intron_retention	FALSE	canonical	3	11	junction_2	8.59177080233457	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTCTCTGATACTCT	NA	False	NA	12	True	ATTAAA	-20	NA	100659652	100713817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ES.12858.1	chr15	+	2633	12	NNC	ENSMUSG00000023033.15	novel	2565	15	NA	NA	-33	9733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.4375456737259	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATTGTTTTTGAG	6636	False	NA	NA	False	TTTAAA	-20	NA	100768492	100882381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768625_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569
ES.12858.10	chr15	+	1220	7	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-10	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.1560124771785	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGCCTCATGGAATT	6959	False	NA	NA	False	NA	NA	NA	100768815	100857901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100857575
ES.12858.11	chr15	+	3413	16	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-3	2868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.6024809724999	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATCTGCAATCCCTGA	6966	False	NA	NA	False	AATAAA	-13	NA	100768822	100911813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897_100909072_100911119
ES.12858.12	chr15	+	3156	14	NNC	ENSMUSG00000023033.15	novel	7030	27	NA	NA	-2	-2161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.4153072500813	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATGACTTTGGGT	6967	False	NA	NA	False	GATAAA	-22	NA	100768823	100906784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933
ES.12858.13	chr15	+	3345	15	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-2	753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.6487880753228	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAACATTGACTTCAT	6967	False	NA	NA	False	ATTAAA	-16	NA	100768823	100909698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897
ES.12858.14	chr15	+	4027	13	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-2	10939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.8112727980415	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATTTTCATTTGATTT	6967	False	NA	NA	False	AATAAA	-19	NA	100768823	100883587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100864168_100864363_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569
ES.12858.15	chr15	+	1338	7	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-2	358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.1560124771785	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACGAATGTAATCATTT	6967	False	NA	NA	False	NA	NA	NA	100768823	100858027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100857575
ES.12858.16	chr15	+	1103	7	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	3	128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.1560124771785	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAAAAAAAGC	6972	False	NA	NA	False	NA	NA	NA	100768828	100857797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100857575
ES.12858.17	chr15	+	2982	12	NIC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	3	2873	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	16.8699449116562	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCAATCCCTGACATTC	6972	False	NA	NA	False	AATAAA	-18	NA	100768828	100911818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100768950_100834151_100834482_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897_100909072_100911119
ES.12858.18	chr15	+	3252	15	NNC	ENSMUSG00000023033.15	novel	7030	27	NA	NA	2	671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.0436863380416	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGTTTTCTTCGTTT	6978	False	NA	NA	False	AATAAA	-17	NA	100768834	100909616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897
ES.12858.19	chr15	+	2783	1	Genic_Genomic	ENSMUSG00000023033.15	novel	NA	NA	NA	NA	1705	14	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGGTGTAGCAGAGCAC	NA	False	NA	NA	False	NA	NA	NA	100835910	100838693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_100835900_100838700
ES.12858.2	chr15	+	7073	26	NNC	ENSMUSG00000023033.15	novel	11293	27	NA	NA	5	122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.4695054866017	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTAATAGAAAAAAGAGTT	6690	False	NA	NA	False	NA	NA	NA	100768546	100939696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768625_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897_100909072_100911119_100911477_100913504_100913976_100914361_100914480_100914921_100915077_100916231_100916406_100927458_100927744_100929590_100929645_100930065_100930204_100931358_100931464_100933315_100933587_100937421
ES.12858.20	chr15	+	2229	1	NIC	ENSMUSG00000023033.15	novel	11436	27	NA	NA	2485	332	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100857449	100859678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100857400_100859700
ES.12858.21	chr15	+	4712	7	NNC	ENSMUSG00000023033.15	novel	840	4	NA	NA	5577	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.1228564260401	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTGGCCTTGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	100860541	100872647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100862910_100862997_100864363_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
ES.12858.22	chr15	+	2279	5	ISM	ENSMUSG00000023033.15	ENSMUST00000202702.2	1618	10	10637	27313	-875	-1	internal_fragment	FALSE	canonical	3	9	junction_3	6.97764286847643	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTGGCCTTGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	100865601	100872647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
ES.12858.23	chr15	+	170	1	Intergenic	novelGene_10726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTATAATGAAACAG	NA	False	NA	NA	False	NA	NA	NA	100868817	100868987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_100868800_100869000
ES.12858.24	chr15	+	3569	3	NNC	ENSMUSG00000023033.15	novel	5814	25	NA	NA	-8789	4416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTATGACAGGAGCCAA	NA	False	NA	NA	False	NA	NA	NA	100905028	100913361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100906173_100908897_100909072_100911110
ES.12858.25	chr15	+	6574	13	NIC	ENSMUSG00000023033.15	novel	5814	25	NA	NA	-4844	-2109	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	2.36143788588413	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTGATGCTGTTCATT	NA	False	NA	NA	False	AAAAAG	-7	NA	100908973	100941701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_100909072_100911119_100911477_100913504_100913976_100914361_100914480_100914921_100915077_100916231_100916406_100921719_100921788_100927458_100927744_100929590_100929645_100930065_100930204_100931358_100931464_100933315_100933587_100937421
ES.12858.26	chr15	+	3664	9	NNC	ENSMUSG00000023033.15	novel	5814	25	NA	NA	538	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.72717802865893	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100914355	100939654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100914480_100914796_100915077_100916231_100916406_100927458_100927744_100929590_100929645_100930065_100930204_100931358_100931464_100933315_100933587_100937421
ES.12858.3	chr15	+	7196	27	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-15	116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	18.0006574501892	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAATACTAATAGAAAAA	6954	False	NA	NA	False	NA	NA	NA	100768810	100939690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897_100909072_100911119_100911477_100913504_100913976_100914361_100914480_100914921_100915077_100916231_100916406_100921719_100921788_100927458_100927744_100929590_100929645_100930065_100930204_100931358_100931464_100933315_100933587_100937421
ES.12858.4	chr15	+	3024	7	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-13	356	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.1560124771785	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAAGTTACTTTGCTCCC	6956	False	NA	NA	False	NA	NA	NA	100768812	100859702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100857575
ES.12858.5	chr15	+	3855	12	NNC	ENSMUSG00000023033.15	novel	11436	27	NA	NA	-13	10950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.7399964383579	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTTCACTGATTCT	6956	False	NA	NA	False	AATAAA	-30	NA	100768812	100883598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569
ES.12858.6	chr15	+	2787	13	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-13	9733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.5739339144917	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATTGTTTTTGAG	6956	False	NA	NA	False	TTTAAA	-20	NA	100768812	100882381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100797272_100797423_100834151_100834482_100853290_100853411_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569
ES.12858.7	chr15	+	1876	11	NNC	ENSMUSG00000023033.15	novel	11436	27	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.195689254687	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTGGCCTTGCAGC	6956	False	NA	NA	False	AATAAA	-23	NA	100768812	100872647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
ES.12858.8	chr15	+	3111	11	NNC	ENSMUSG00000023033.15	novel	11436	27	NA	NA	-13	1234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.195689254687	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAATAGTTTAATTAAAA	6956	False	NA	NA	False	NA	NA	NA	100768812	100873882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857483_100857576_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303
ES.12858.9	chr15	+	4534	20	NNC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	-12	7991	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.655481427289	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTATGACCCTGTCCAC	6957	False	NA	NA	False	AATGAA	-16	NA	100768813	100916936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_100768950_100834151_100834482_100853290_100853412_100854911_100855000_100855341_100855471_100857220_100857313_100866901_100867124_100868084_100868149_100869400_100869543_100870634_100870842_100872303_100872598_100881569_100881927_100899914_100900048_100905933_100906173_100908897_100909072_100911119_100911477_100913504_100913976_100914361_100914480_100914921_100915077_100916231
ES.12859.1	chr15	-	808	2	Antisense	novelGene_ENSMUSG00000023033.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCGAGAGCCTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	100820289	100819259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_100819853_100820074
ES.1286.1	chr1	+	8994	22	NNC	ENSMUSG00000042268.11	novel	4739	21	NA	NA	34	3346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.949997016345715	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTGGGTCATG	9848	False	NA	NA	False	NA	NA	NA	131671809	131702588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131671852_131678036_131678154_131678317_131678461_131679671_131680722_131680857_131680969_131681564_131681741_131683109_131683275_131683994_131684080_131684374_131684458_131685125_131685274_131686208_131686323_131686496_131686575_131687135_131687232_131689443_131689551_131690493_131690564_131690652_131690746_131690882_131690997_131691531_131691814_131692724_131692780_131693621_131693765_131695546_131695619_131696938
ES.12860.1	chr15	-	187	1	Intergenic	novelGene_10725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAAGGAGAGCC	NA	False	NA	NA	False	NA	NA	NA	100861963	100861776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_100861800_100862000
ES.12861.1	chr15	-	3048	4	Antisense	novelGene_ENSMUSG00000023033.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGCCACTCATAAT	NA	False	NA	NA	False	NA	NA	NA	100909329	100879529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_100881922_100899888_100899986_100903730_100903837_100908876
ES.12862.1	chr15	-	2614	1	FSM	ENSMUSG00000113558.2	ENSMUST00000222611.2	1056	1	-1039	-519	-1039	519	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACATTCTCATTTCTCA	NA	False	NA	NA	False	AGTAAA	-34	NA	100946317	100943703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100943700_100946300
ES.12863.1	chr15	-	4218	1	FSM	ENSMUSG00000095440.3	ENSMUST00000178140.2	4206	1	-13	1	-13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGGATTTCTTGTGG	NA	False	NA	-4	True	ATTAAA	-16	NA	100952293	100948075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_100948100_100952300
ES.12864.1	chr15	-	159	1	Intergenic	novelGene_10727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAACAAATT	NA	False	NA	NA	False	NA	NA	NA	101004904	101004745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101004700_101004900
ES.12865.1	chr15	+	3436	9	ISM	ENSMUSG00000000530.17	ENSMUST00000120754.2	3506	10	478	1	478	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGCTGCCTTCCAGG	NA	False	NA	NA	False	AATAAA	-18	NA	101032491	101043216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101032625_101033178_101033425_101033629_101033842_101034008_101034109_101034864_101035012_101035244_101035521_101036088_101036287_101038947_101039079_101041223
ES.12866.1	chr15	-	152	1	Intergenic	novelGene_10728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATTTTAAA	6652	False	NA	NA	False	NA	NA	NA	101047682	101047530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101047500_101047700
ES.12867.1	chr15	+	5827	2	Intergenic	novelGene_10729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCATTATCTGAA	NA	False	NA	NA	False	NA	NA	NA	101062910	101069296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_101062936_101063494
ES.12868.1	chr15	+	1021	1	Intergenic	novelGene_10730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCACCAGTTTGACTT	NA	False	NA	NA	False	AATAAA	-30	NA	101069390	101070411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_101069400_101070400
ES.12869.1	chr15	+	4400	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	24	-6	24	6	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCTGCCTTCCATAT	NA	False	NA	27	True	ATTAAA	-24	NA	101071971	101111571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
ES.12869.2	chr15	+	4301	10	NNC	ENSMUSG00000000532.12	novel	4418	9	NA	NA	42	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.78204970278119	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTCTGATCCCGTC	NA	False	NA	15	True	ATTAAA	-12	NA	101071989	101111559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617_101109867_101109935
ES.12869.3	chr15	+	3023	7	ISM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	55	7368	55	-7368	5prime_fragment	FALSE	canonical	3	12	junction_4	3.82970843102535	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGATGGGAGATTC	NA	False	NA	NA	False	NA	NA	NA	101072002	101104197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333
ES.12869.4	chr15	+	2008	4	NNC	ENSMUSG00000000532.12	novel	4418	9	NA	NA	66	-14632	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.11805216802087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGCCTGGCTGCTCTG	NA	False	NA	NA	False	AATAAA	-40	NA	101072013	101096933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101072117_101091812_101092053_101092689_101094086_101096664
ES.12869.5	chr15	+	3303	7	NNC	ENSMUSG00000000532.12	novel	4418	9	NA	NA	24719	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5.20949986936259	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTCTGATCCCGTC	NA	False	NA	15	True	ATTAAA	-12	NA	101096666	101111559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617_101109502_101109950
ES.12869.6	chr15	+	2399	1	Genic_Genomic	ENSMUSG00000000532.12	novel	NA	NA	NA	NA	39249	2030	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATAATTGGGCGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	101111196	101113595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_101111200_101113600
ES.1287.1	chr1	+	3565	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	-12	3347	-12	1738	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725106	131745852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.10	chr1	+	2228	14	NNC	ENSMUSG00000042251.13	novel	2305	14	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	18.8779950795854	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGAGACGGCTTAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	131725139	131749214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724_131743774_131748439
ES.1287.12	chr1	+	3386	14	NNC	ENSMUSG00000042251.13	novel	2305	14	NA	NA	4	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.8779950795854	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTGGTATTGTGTTCT	NA	False	NA	1	True	AATAAA	-14	NA	131725139	131745850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724_131743849_131743992
ES.1287.13	chr1	+	4377	13	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	5	-2503	intron_retention	FALSE	non_canonical	0	0	junction_4	19.4141629287029	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	131725140	131746696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729553_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.14	chr1	+	5986	8	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	5	1737	intron_retention	FALSE	canonical	3	7	junction_2	22.8589285016796	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTGTGTTCTT	NA	False	NA	2	True	AATAAA	-15	NA	131725140	131745851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131726421_131728831_131729036_131729463_131730578_131731789_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.15	chr1	+	3446	12	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	5	1738	intron_retention	FALSE	canonical	0	0	junction_6	26.6560584960615	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725140	131745852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731868_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.16	chr1	+	4510	11	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	5	1738	intron_retention	FALSE	canonical	1	1	junction_2	20.8060087474749	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725140	131745852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131725325_131726333_131726421_131729463_131729551_131730038_131730173_131730457_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.17	chr1	+	3470	13	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	13	1738	intron_retention	FALSE	canonical	0	0	junction_1	31.7230857053135	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725148	131745852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131725648_131725745_131726333_131726421_131728831_131729036_131729463_131729551_131730038_131730173_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.18	chr1	+	3381	11	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	16	1740	intron_retention	FALSE	canonical	0	0	junction_7	20.743432695675	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTATTGTGTTCTTGGA	NA	False	NA	5	True	AATAAA	-18	NA	131725151	131745854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.19	chr1	+	1916	14	NNC	ENSMUSG00000042251.13	novel	2305	14	NA	NA	17	68	intron_retention	FALSE	canonical	0	0	junction_1	28.2254239332737	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGGTTTAAATACTAGA	NA	False	NA	NA	False	AATACA	-18	NA	131725152	131744182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131725648_131725745_131726333_131726421_131728831_131729036_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.2	chr1	+	3509	13	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	-3	1737	intron_retention	FALSE	canonical	3	7	junction_3	17.7153417503963	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTGTGTTCTT	NA	False	NA	2	True	AATAAA	-15	NA	131725132	131745851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729036_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.20	chr1	+	7285	3	ISM	ENSMUSG00000042251.13	ENSMUST00000152989.2	421	4	-4984	-1737	-4984	1737	intron_retention	FALSE	canonical	3	70	junction_2	2	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTGTGTTCTT	NA	False	NA	2	True	AATAAA	-15	NA	131734883	131745851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131739942_131741628_131741729_131743724
ES.1287.3	chr1	+	1626	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	20	5254	3	-169	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGAACAGAGTTCACCT	NA	False	NA	NA	False	AATGAA	-17	NA	131725138	131743945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.4	chr1	+	4533	10	NNC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	3	68	intron_retention	FALSE	canonical	3	7	junction_3	20.2977831301844	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGGTTTAAATACTAGA	NA	False	NA	NA	False	AATACA	-18	NA	131725138	131744182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729036_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131732710_131734636_131734709_131739772_131739942_131741628
ES.1287.7	chr1	+	3608	14	NNC	ENSMUSG00000042251.13	novel	2305	14	NA	NA	4	1737	intron_retention	FALSE	canonical	0	0	junction_11	27.7838231422957	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTGTGTTCTT	NA	False	NA	2	True	AATAAA	-15	NA	131725139	131745851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131725325_131726333_131726421_131728831_131729036_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131740027_131740134_131741628_131741729_131743724
ES.1287.8	chr1	+	3931	12	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	4	1738	intron_retention	FALSE	canonical	3	61	junction_6	5.59958676161254	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTATTGTGTTCTTG	NA	False	NA	3	True	AATAAA	-16	NA	131725139	131745852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131725325_131726333_131726421_131728831_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.1287.9	chr1	+	3298	12	NIC	ENSMUSG00000042251.13	novel	6900	13	NA	NA	4	1737	intron_retention	FALSE	canonical	1	1	junction_2	20.1305655514565	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTGTGTTCTT	NA	False	NA	2	True	AATAAA	-15	NA	131725139	131745851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131725325_131726333_131726421_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ES.12870.1	chr15	+	2070	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-37	0	-37	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6204	False	NA	12	True	TATAAA	-21	NA	101122031	101130637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.10	chr15	+	6328	5	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	36	-3	intron_retention	FALSE	canonical	3	182	junction_4	21.4636320318813	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6277	False	NA	9	True	TATAAA	-18	NA	101122104	101130634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
ES.12870.11	chr15	+	2431	8	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.60207318181	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6278	False	NA	9	True	TATAAA	-18	NA	101122105	101130634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101122864_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.12	chr15	+	3783	7	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	38	-1323	38	1323	intron_retention	FALSE	canonical	3	148	junction_1	34.0069437353935	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	6279	False	NA	NA	False	NA	NA	NA	101122106	101131960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865
ES.12870.13	chr15	+	5794	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	38	-1	intron_retention	FALSE	canonical	1	1	junction_1	80.9336147716139	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTCAGTGTGGTAAC	6279	False	NA	11	True	TATAAA	-20	NA	101122106	101130636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101124845_101125281_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.14	chr15	+	3733	6	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	185	1323	intron_retention	FALSE	canonical	3	148	junction_1	37.0869249197072	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	6426	False	NA	NA	False	NA	NA	NA	101122253	101131960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865
ES.12870.15	chr15	+	5226	5	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	1509	0	intron_retention	FALSE	canonical	3	205	junction_3	13.5369863706809	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	7750	False	NA	12	True	TATAAA	-21	NA	101123577	101130637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865
ES.12870.16	chr15	+	5369	2	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4091	1323	intron_retention	FALSE	canonical	3	46	junction_1	0	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	NA	False	NA	NA	False	NA	NA	NA	101126159	101131960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101126281_101126712
ES.12870.17	chr15	+	1708	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4132	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAGTGTGGTAACTGC	NA	False	NA	14	True	TATAAA	-23	NA	101126200	101130639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.18	chr15	+	3582	5	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4132	1307	intron_retention	FALSE	canonical	3	46	junction_1	76.834237160266	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGC	NA	False	NA	NA	False	NA	NA	NA	101126200	101131944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101126281_101126712_101126975_101128414_101128509_101128605_101128673_101128865
ES.12870.19	chr15	+	1795	6	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4138	-2	intron_retention	FALSE	canonical	3	46	junction_1	70.1769192826245	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCAGTGTGGTAA	NA	False	NA	10	True	TATAAA	-19	NA	101126206	101130635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
ES.12870.2	chr15	+	4429	7	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	157	junction_1	27.427176303805	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTCAGTGTGGTAAC	6213	False	NA	11	True	TATAAA	-20	NA	101122040	101130636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.20	chr15	+	3007	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4138	1307	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGC	NA	False	NA	NA	False	NA	NA	NA	101126206	101131944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.22	chr15	+	3196	3	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	5081	2	5081	-2	intron_retention	FALSE	canonical	3	205	junction_1	18.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCAGTGTGGTAA	NA	False	NA	10	True	TATAAA	-19	NA	101127149	101130635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101128509_101128605_101128673_101128865
ES.12870.23	chr15	+	4411	2	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	5288	1323	intron_retention	FALSE	canonical	3	242	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	NA	False	NA	NA	False	NA	NA	NA	101127356	101131960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101128673_101128865
ES.12870.3	chr15	+	4533	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-6	-2494	-6	2494	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAGTCAGTAAAGCCCC	6235	False	NA	5	True	AATGAA	-13	NA	101122062	101133131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.4	chr15	+	2790	5	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	-5	3	-5	-3	intron_retention	FALSE	canonical	3	148	junction_1	32.7032108515357	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6236	False	NA	9	True	TATAAA	-18	NA	101122063	101130634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414
ES.12870.5	chr15	+	1557	1	Genic_Genomic	ENSMUSG00000000531.6	novel	NA	NA	NA	NA	-5	-7017	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCAGTTTTTCAAGCAT	6236	False	NA	NA	False	NA	NA	NA	101122063	101123620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_101122100_101123600
ES.12870.6	chr15	+	2129	7	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	148	junction_1	34.2782730020052	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCTGTGTCAGTGTGG	6237	False	NA	7	True	TATAAA	-16	NA	101122064	101130632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
ES.12870.7	chr15	+	2492	7	ISM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	3	3	3	-3	intron_retention	FALSE	canonical	3	148	junction_1	34.0069437353935	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGTCAGTGTGGTA	6244	False	NA	9	True	TATAAA	-18	NA	101122071	101130634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865
ES.12870.8	chr15	+	4333	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	35	-2335	35	2335	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGACTCTGTCTTTTG	6276	False	NA	10	True	NA	NA	NA	101122103	101132972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12870.9	chr15	+	3320	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	36	-1323	36	1323	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCCGTAATAGCAGATAA	6277	False	NA	NA	False	NA	NA	NA	101122104	101131960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ES.12871.1	chr15	-	1249	3	NNC	ENSMUSG00000097915.3	novel	1393	3	NA	NA	117	-1	intron_retention	FALSE	canonical	1	1	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCGCCTCTGCTTCTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	101122541	101119076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_101120071_101121361_101121515_101122439
ES.12871.2	chr15	-	1210	3	FSM	ENSMUSG00000097915.3	ENSMUST00000229239.2	484	3	102	-828	102	-2	multi-exon	FALSE	canonical	3	7	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCGCCTCTGCTTCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	101122556	101119077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_101120071_101121361_101121515_101122492
ES.12872.1	chr15	+	2613	7	NIC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-182	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	73.2175221894019	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTCTTTTTTTCTG	335	False	NA	16	True	AATAAA	-18	NA	101151967	101172673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101152233_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.10	chr15	+	2582	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	-102	-3	-102	3	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTTTTCTGTTTTTG	NA	False	NA	22	True	AATAAA	-24	NA	101164624	101172679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.11	chr15	+	2197	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	7	273	7	-273	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTCTGTTGTAAATAAG	NA	False	NA	NA	False	GATAAA	-16	NA	101164733	101172403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.12	chr15	+	2404	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1194	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTTTTCTGTTTTTG	NA	False	NA	22	True	AATAAA	-24	NA	101165920	101172679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.13	chr15	+	3397	7	NIC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1215	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	71.759823175801	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTTTTCTGTTTTTG	NA	False	NA	22	True	AATAAA	-24	NA	101165941	101172679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101166985_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.14	chr15	+	4089	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1416	-8	intron_retention	TRUE	non_canonical	0	0	junction_1	73.2175221894019	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTGAGTCTTTTT	NA	False	NA	11	True	AATAAA	-13	NA	101166142	101172668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101166236_101166310_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.2	chr15	+	2720	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-164	-3	-164	3	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTTTTCTGTTTTTG	353	False	NA	22	True	AATAAA	-24	NA	101151985	101172679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.3	chr15	+	2774	9	NNC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	82.2069606237817	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTCTTTTTTTCTG	478	False	NA	16	True	AATAAA	-18	NA	101152110	101172673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101152233_101156188_101156308_101158535_101158721_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.4	chr15	+	2316	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	-38	275	-38	-275	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTCTGTTGTAAATA	479	False	NA	NA	False	GATAAA	-14	NA	101152111	101172401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.5	chr15	+	3105	9	NNC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.6089243060337	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTCTTTTTTTCTG	501	False	NA	16	True	AATAAA	-18	NA	101152133	101172673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101152233_101156188_101156308_101158181_101158721_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.6	chr15	+	2513	8	NNC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	69.0433167789377	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGAGTCTTTTTTTC	501	False	NA	14	True	AATAAA	-16	NA	101152133	101172671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101152233_101156188_101156257_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.7	chr15	+	2670	9	NNC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-9	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.6089243060337	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAATAGACATGTAG	508	False	NA	-7	True	AATATA	-13	NA	101152140	101172650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101152233_101156188_101156257_101158535_101158721_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.8	chr15	+	2470	9	NNC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	-7	-275	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	82.2069606237817	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTCTGTTGTAAATA	510	False	NA	NA	False	GATAAA	-14	NA	101152142	101172401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101152233_101156188_101156308_101158535_101158721_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ES.12872.9	chr15	+	5127	1	NIC	ENSMUSG00000023034.8	novel	2553	8	NA	NA	1476	-9253	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1993	False	NA	NA	False	NA	NA	NA	101153625	101158752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101153600_101158800
ES.12873.1	chr15	-	156	1	Intergenic	novelGene_10731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	101153352	101153196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101153200_101153400
ES.12874.1	chr15	-	175	1	Intergenic	novelGene_10732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	101157383	101157208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101157200_101157400
ES.12875.1	chr15	+	1272	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	0	-2	0	2	multi-exon	FALSE	canonical	3	465	junction_2	16.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCCTGTGTCCTGC	8030	False	NA	33	True	AATAAA	-25	NA	101182152	101188828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101182427_101184813_101185132_101188148
ES.12875.2	chr15	+	3641	2	FSM	ENSMUSG00000037204.8	ENSMUST00000230525.2	605	2	-2446	-590	15	-1	multi-exon	FALSE	canonical	3	465	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTTGGCCTGTGTCC	8045	False	NA	30	True	AATAAA	-22	NA	101182167	101188825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101185132_101188148
ES.12875.3	chr15	+	4267	2	ISM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	19	1	19	-1	intron_retention	FALSE	canonical	3	498	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTTGGCCTGTGTCC	8049	False	NA	30	True	AATAAA	-22	NA	101182171	101188825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101182427_101184813
ES.12875.4	chr15	+	6610	3	FSM	ENSMUSG00000037204.8_ENSMUSG00000075408.6	ENSMUST00000048393.8	1270	3	31	-5371	31	-299	multi-exon	FALSE	canonical	3	465	junction_2	16.5	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTCTGAGTGTGTGGTC	8061	False	NA	NA	False	ATTAAA	-13	NA	101182183	101194197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101182427_101184813_101185132_101188148
ES.12875.5	chr15	+	1347	4	NNC	ENSMUSG00000037204.8	novel	1270	3	NA	NA	47	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.733221578758	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTGTCTCAGCTCTCT	8077	False	NA	18	True	AATAAA	-10	NA	101182199	101188813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101182427_101184558_101184696_101184813_101185132_101188148
ES.12876.1	chr15	+	176	1	FSM	ENSMUSG00000116395.2	ENSMUST00000229927.2	2437	1	1940	321	1940	-321	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATTTCCC	NA	False	NA	NA	False	NA	NA	NA	101215922	101216098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101215900_101216100
ES.12877.1	chr15	+	2550	4	NNC	ENSMUSG00000116114.2	novel	833	4	NA	NA	-35	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGATCCTTTCAATAT	888	False	NA	NA	False	AATAAA	-23	NA	101262585	101303732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101262699_101264782_101265322_101301319_101301441_101301955
ES.12878.1	chr15	-	3200	9	FSM	ENSMUSG00000037185.10	ENSMUST00000077196.6	3067	9	-137	4	-137	-4	multi-exon	FALSE	canonical	1	1	junction_1	2.06155281280883	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTGCTGTGCACTCG	6608	False	NA	NA	False	AATAAA	-21	NA	101268180	101246199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_101247921_101248049_101248106_101248876_101249098_101249554_101249681_101250057_101250223_101256527_101256624_101257360_101257422_101262090_101262300_101267635
ES.12879.1	chr15	-	861	4	NNC	ENSMUSG00000116116.2	novel	777	4	NA	NA	12561	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTCAGGGCCTCCAGT	NA	False	NA	NA	False	AAAAAG	-25	NA	101297631	101293305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_101293583_101294895_101295056_101296177_101296400_101297429
ES.1288.1	chr1	-	195	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGCCACCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	131742228	131742033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131742000_131742200
ES.12880.1	chr15	+	1687	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	-110	2517	-110	7	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCGGCTAGCTAGGAGTG	NA	False	NA	13	True	AATAAA	-20	NA	101310172	101325677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ES.12880.2	chr15	+	958	7	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2688	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	19.0036546192802	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGCATCGGCTAGCTA	NA	False	NA	7	True	AATAAA	-14	NA	101313017	101325671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101313056_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ES.12880.3	chr15	+	1033	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2688	15	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAGGAGTGGTACTCAC	NA	False	NA	21	True	AATAAA	-28	NA	101313017	101325685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ES.12881.1	chr15	-	2123	9	FSM	ENSMUSG00000061397.9	ENSMUST00000023799.8	2097	9	-30	4	-30	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.992156741649222	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTGTGTGTGACTCCA	3193	False	NA	NA	False	AATAAA	-16	NA	101848789	101837770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_101838364_101838602_101838638_101839112_101839334_101839859_101839986_101840186_101840352_101844539_101844636_101844735_101844797_101846260_101846479_101848181
ES.12882.1	chr15	-	1803	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	147	8	147	-8	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTATGTATGCATTC	6039	False	NA	-2	True	AATAAA	-24	NA	101912770	101905140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ES.12882.2	chr15	-	173	1	Intergenic	novelGene_10733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	101908492	101908319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101908300_101908500
ES.12883.1	chr15	+	2448	4	NIC	ENSMUSG00000023043.8	novel	1437	7	NA	NA	12	-1	intron_retention	FALSE	canonical	3	33	junction_3	6.23609564462324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTCTTCCTTGGCA	NA	False	NA	11	True	AATAAA	-23	NA	101936626	101940461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101937110_101937900_101939456_101939730_101939955_101940275
ES.12883.2	chr15	+	1404	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	27	6	27	-6	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCACTTTGTGTCTTCCT	NA	False	NA	6	True	AATAAA	-18	NA	101936641	101940456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
ES.12884.1	chr15	+	172	1	Intergenic	novelGene_10734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	101956926	101957098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_101956900_101957100
ES.12885.1	chr15	+	175	2	Intergenic	novelGene_10735	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATATTCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	101961636	101988535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_101961664_101988387
ES.12885.10	chr15	+	3448	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	20	589	20	-589	intron_retention	FALSE	canonical	3	620	junction_1	90.4160010973604	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATTGAGCAAGGTCCTGG	NA	False	NA	19	True	AATAAA	-15	NA	101982227	102005019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411
ES.12885.13	chr15	+	6541	12	NIC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-37	-2	intron_retention	FALSE	canonical	3	620	junction_1	92.8795541023315	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101982261	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101982399_101990410_101990549_101992595_101993231_101994437_101994493_101994939_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.14	chr15	+	3776	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	228.172922699126	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTTAATGTTGCAGTT	NA	False	NA	46	True	AATAAA	-16	NA	101982262	102005605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990430_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.16	chr15	+	3562	13	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.107855195418	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982307	102005608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101997052_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.17	chr15	+	3711	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	51	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	228.970187882125	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTTGATGGTTAATGT	NA	False	NA	39	True	AATAAA	-9	NA	101982349	102005598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999939_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.18	chr15	+	3670	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	59	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	232.238672534116	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982357	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995057_101997065_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.19	chr15	+	2304	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	59	578	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	226.675586309094	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAGGTAGCTCTAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	101982357	102004212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003415_102003485_102003687
ES.12885.2	chr15	+	3976	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-115	-7	-115	7	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGTTTATCGCTCTT	NA	False	NA	56	True	AATAAA	-26	NA	101982092	102005615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.20	chr15	+	3817	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	232.061799035146	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101982357	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003572
ES.12885.21	chr15	+	3694	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	59	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	231.275478464051	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982357	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999840_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.22	chr15	+	2167	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	151	1739	60	235	intron_retention	FALSE	canonical	3	620	junction_1	90.4160010973604	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTTTCTAAACTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	101982358	102003869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411
ES.12885.24	chr15	+	3091	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	67	-594	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	232.212571949558	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACGATTGAGCAAGGT	NA	False	NA	14	True	AATAAA	-10	NA	101982365	102005014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993220_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.25	chr15	+	3737	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	229.209700350343	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982365	102005608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001379_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.27	chr15	+	3620	16	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	77	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	224.467626965573	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982375	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687_102004942_102005006
ES.12885.29	chr15	+	3601	16	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	77	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	224.467626965573	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGATGGTTAATGTT	NA	False	NA	40	True	AATAAA	-10	NA	101982375	102005599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687_102005398_102005473
ES.12885.30	chr15	+	5457	15	NNC	ENSMUSG00000058655.10	novel	583	3	NA	NA	331	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	227.431308310883	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101982629	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101984426_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.31	chr15	+	6990	16	NNC	ENSMUSG00000058655.10	novel	583	3	NA	NA	571	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	295.475255591169	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGATTGAGCAAGGTCCT	NA	False	NA	17	True	AATAAA	-13	NA	101982869	102005017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101986632_101987247_101987404_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.32	chr15	+	6451	15	NNC	ENSMUSG00000058655.10	novel	583	3	NA	NA	604	237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.647794953355	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTCTAAACTTTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	101982902	102003871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101985560_101988438_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001531_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.33	chr15	+	3922	16	NNC	ENSMUSG00000058655.10	novel	583	3	NA	NA	4139	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	295.641419440661	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACCTTTCTAAACTTT	NA	False	NA	13	True	AATAAA	-13	NA	101986437	102003867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101986548_101988428_101990319_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.34	chr15	+	7010	14	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	4661	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	229.670512645177	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101986959	102005608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001531_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.35	chr15	+	7071	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	4794	1	4703	-1	3prime_fragment	FALSE	canonical	3	745	junction_2	66.2960903646145	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101987001	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.36	chr15	+	4106	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	6031	1729	5940	245	3prime_fragment	FALSE	canonical	3	745	junction_2	66.2960903646145	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTTTTTTAATGAA	NA	False	NA	25	True	AATAAA	-25	NA	101988238	102003879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.37	chr15	+	4824	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	6452	590	-5799	-590	3prime_fragment	FALSE	canonical	3	745	junction_2	66.2960903646145	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATTGAGCAAGGTCCTG	NA	False	NA	18	True	AATAAA	-14	NA	101988659	102005018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.38	chr15	+	3406	12	NIC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-5720	235	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	252.939185190746	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTTTCTAAACTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	101988738	102003869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101990549_101992595_101992805_101993113_101993231_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.39	chr15	+	3660	14	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-4052	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	234.158900177944	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101990406	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002144_102003106_102003213_102003411_102003485_102003687
ES.12885.4	chr15	+	4010	14	NIC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	620	junction_1	88.5563371649427	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101982152	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.40	chr15	+	3654	14	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-4051	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	235.29404994778	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101990407	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001624_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.41	chr15	+	2943	13	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10387	583	-1864	-583	3prime_fragment	FALSE	canonical	3	745	junction_1	66.1337029559563	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTCCTGGTTTCTC	NA	False	NA	25	True	AATAAA	-21	NA	101992594	102005025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.42	chr15	+	1787	13	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10387	1739	-1864	235	3prime_fragment	FALSE	canonical	3	745	junction_1	66.1337029559563	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTTTCTAAACTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	101992594	102003869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.43	chr15	+	1439	12	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-1300	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	254.127318907031	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAACTTTTTTTTTAATG	NA	False	NA	23	True	AATAAA	-23	NA	101993158	102003877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001521_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.44	chr15	+	1405	10	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	12730	1741	479	233	3prime_fragment	FALSE	canonical	3	804	junction_1	47.3497624070069	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACCTTTCTAAACTTT	NA	False	NA	13	True	AATAAA	-13	NA	101994937	102003867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.45	chr15	+	2697	7	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	16091	2	3840	-2	3prime_fragment	FALSE	canonical	3	820	junction_6	39.4985935051982	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTAATGTTGCAGTTT	NA	False	NA	47	True	AATAAA	-17	NA	101998298	102005606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.46	chr15	+	3480	2	FSM	ENSMUSG00000058655.10	ENSMUST00000229254.2	437	2	-1072	-1971	-1072	-3	multi-exon	FALSE	canonical	3	938	junction_1	0	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTTAATGTTGCAGTT	2437	False	NA	46	True	AATAAA	-16	NA	102001926	102005605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102003213_102003411
ES.12885.47	chr15	+	3578	1	NIC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-976	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	957	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGGTTAATGTTG	2533	False	NA	41	True	AATAAA	-11	NA	102002022	102005600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102002000_102005600
ES.12885.49	chr15	+	2514	2	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	19926	3	-865	-3	intron_retention	FALSE	canonical	3	912	junction_1	0	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTTAATGTTGCAGTT	2644	False	NA	46	True	AATAAA	-16	NA	102002133	102005605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102002149_102003106
ES.12885.5	chr15	+	3793	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	225.328841329054	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982163	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001531_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.50	chr15	+	1993	2	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	21202	3	411	-3	3prime_fragment	FALSE	canonical	3	820	junction_1	0	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTTAATGTTGCAGTT	3920	False	NA	46	True	AATAAA	-16	NA	102003409	102005605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102003485_102003687
ES.12885.6	chr15	+	4088	14	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-31	0	-31	0	intron_retention	FALSE	canonical	3	620	junction_1	90.4160010973604	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982176	102005608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411
ES.12885.7	chr15	+	3296	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	-28	586	-28	-586	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCAAGGTCCTGGTTT	NA	False	NA	22	True	AATAAA	-18	NA	101982179	102005022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12885.8	chr15	+	6561	10	NIC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	620	junction_1	90.2233169063311	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAATGTTGCAGTTTA	NA	False	NA	48	True	AATAAA	-18	NA	101982201	102005607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101995075_101997050_101997466_101998300_101998530_101999831_102002149_102003106_102003213_102003411
ES.12885.9	chr15	+	2146	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	19	1689	19	285	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGCCTTTTAAAGTAT	NA	False	NA	65	True	AATGAA	-21	NA	101982226	102003919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ES.12886.1	chr15	-	168	2	Antisense	novelGene_ENSMUSG00000058655.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	101987391	101985581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_101985731_101987372
ES.12886.2	chr15	-	171	1	Intergenic	novelGene_10736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATAGTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	101985752	101985581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101985600_101985800
ES.12886.3	chr15	-	3323	1	Intergenic	novelGene_10737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCTAAAAGATCTCTCAT	NA	False	NA	NA	False	AAAAAG	-8	NA	101989586	101986263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_101986300_101989600
ES.12887.1	chr15	+	4708	29	FSM	ENSMUSG00000037003.17	ENSMUST00000228958.2	4268	29	-36	-404	-36	0	multi-exon	FALSE	canonical	1	1	junction_1	4.23180378388532	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	9322	False	NA	NA	False	AATAAA	-18	NA	102008811	102024835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102008988_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12887.2	chr15	+	4784	29	FSM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	-24	1	-24	0	multi-exon	TRUE	canonical	1	1	junction_1	4.23180378388532	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	102011344	102024835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12887.3	chr15	+	4746	29	FSM	ENSMUSG00000037003.17	ENSMUST00000046144.10	4718	29	-23	-5	-23	-4	multi-exon	FALSE	canonical	0	0	junction_18	4.70832957076486	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGGAGTTGATACCT	NA	False	NA	NA	False	AATAAA	-14	NA	102011399	102024831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020842_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12887.4	chr15	+	4559	29	NNC	ENSMUSG00000037003.17	novel	4637	28	NA	NA	539	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.23180378388532	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGAGTTGATACCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	102011961	102024833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102011991_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12887.5	chr15	+	4724	28	FSM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	-86	-1	-86	0	multi-exon	FALSE	canonical	2	5	junction_10	3.82361444641615	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102012773	102024836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12887.6	chr15	+	5472	23	NIC	ENSMUSG00000037003.17	novel	4761	29	NA	NA	-19	0	intron_retention	FALSE	canonical	2	5	junction_10	3.69190537382206	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102012840	102024836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102024065_102024171
ES.12887.7	chr15	+	4331	21	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	2903	-1	710	0	intron_retention	FALSE	canonical	2	5	junction_4	3.70270171631472	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102015762	102024836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171
ES.12887.8	chr15	+	4201	22	ISM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	2942	-1	749	0	3prime_fragment	FALSE	canonical	2	5	junction_4	4.0607629724434	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102015801	102024836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ES.12888.1	chr15	-	1592	13	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-12	6591	intron_retention	FALSE	canonical	0	0	junction_1	70.1021080678431	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	102044639	102018371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102018499_102019000_102019165_102026087_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.10	chr15	-	2418	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	58.3081469436304	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACGGAAGGGGAATCCT	NA	False	NA	-6	True	AATAAA	-25	NA	102044639	102024963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026642_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.11	chr15	-	2810	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	58.5703850081251	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACGGAAGGGGAATCC	NA	False	NA	-7	True	AATAAA	-24	NA	102044641	102024964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026649_102026726_102027231_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.12	chr15	-	2335	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.8791983641082	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGACGGAAGGGGAAT	NA	False	NA	-9	True	AATAAA	-22	NA	102044641	102024966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026560_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.13	chr15	-	2417	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.5925763215785	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACAGACGGAAGGGGAA	NA	False	NA	-10	True	AATAAA	-21	NA	102044639	102024967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026141_102026471_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.14	chr15	-	3489	10	NIC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	150	junction_5	19.3492909877441	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGACAGACGGAAGGGG	NA	False	NA	-12	True	AATAAA	-19	NA	102044632	102024969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102040379_102041850_102041998_102044570
ES.12888.15	chr15	-	1651	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	-10	815	-10	-815	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGACCTGATTGGTA	NA	False	NA	NA	False	NA	NA	NA	102044679	102025777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.16	chr15	-	1407	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	13	1036	13	605	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTCTCCGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	102044656	102025998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.2	chr15	-	4988	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	-3	-2529	-3	2529	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCAGTTTCTCCCCA	NA	False	NA	NA	False	AATAAA	-16	NA	102044672	102022433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.3	chr15	-	2636	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	11	-191	11	191	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCACTCTGGTCTCTGTG	NA	False	NA	NA	False	AATAGA	-26	NA	102044658	102024771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.4	chr15	-	1928	4	NIC	ENSMUSG00000036966.16	novel	2666	10	NA	NA	9489	185	intron_retention	FALSE	canonical	3	176	junction_2	5.43650214343336	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGACCCCACTCTGGTC	NA	False	NA	NA	False	AATAGA	-20	NA	102027830	102024777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102026149_102026475_102026847_102027362_102027421_102027702
ES.12888.5	chr15	-	2464	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	-5	-3	-5	3	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAAGGGGAATCCTTCCC	NA	False	NA	-2	True	AATAAA	-29	NA	102044674	102024959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.6	chr15	-	3413	10	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	-13	1	intron_retention	FALSE	non_canonical	0	0	junction_5	62.0609019879308	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGGAAGGGGAATCCTTC	NA	False	NA	-4	True	AATAAA	-27	NA	102044640	102024961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026847_102027362_102027421_102027702_102027853_102036973_102037728_102038373_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.7	chr15	-	2437	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.9036501415659	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGGAAGGGGAATCCTTC	NA	False	NA	-4	True	AATAAA	-27	NA	102044658	102024961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037151_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ES.12888.8	chr15	-	3135	4	NIC	ENSMUSG00000036966.16	novel	2666	10	NA	NA	8097	0	intron_retention	FALSE	canonical	3	176	junction_2	5.43650214343336	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	False	NA	-5	True	AATAAA	-26	NA	102029222	102024962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102026149_102026475_102026847_102027362_102027421_102027702
ES.12888.9	chr15	-	2450	11	NNC	ENSMUSG00000036966.16	novel	2456	11	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	58.5201674638752	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACGGAAGGGGAATCCT	NA	False	NA	-6	True	AATAAA	-25	NA	102044649	102024963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040287_102040379_102041850_102041998_102044570
ES.12889.1	chr15	+	2282	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	-69	-5	-69	5	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTCTCTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	102058891	102071909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.2	chr15	+	1912	12	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	-18	-9	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.85923019793528	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102058942	102071895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102059148_102059540_102059597_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.3	chr15	+	3352	10	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	11	-9	intron_retention	FALSE	canonical	0	0	junction_2	6.86555186923352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102058971	102071895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102059148_102059540_102059597_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.4	chr15	+	2203	15	NNC	ENSMUSG00000023045.14	novel	1628	13	NA	NA	209	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5.4962881723459	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTCTCTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	102059169	102071909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102059347_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.6	chr15	+	2142	14	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	450	9	-140	-9	3prime_fragment	FALSE	canonical	3	11	junction_9	3.75113395084203	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102059410	102071895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.7	chr15	+	2473	13	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	-107	-9	intron_retention	FALSE	canonical	3	11	junction_9	3.90423559170749	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102059443	102071895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069586_102070443_102070580_102070988_102071135_102071331
ES.12889.8	chr15	+	1554	1	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	-63	-10526	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGGCTAGCTGGGCGG	NA	False	NA	NA	False	NA	NA	NA	102059487	102061041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102059500_102061000
ES.12889.9	chr15	+	941	1	NIC	ENSMUSG00000023045.14	novel	2208	15	NA	NA	11404	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAAATCTTGT	NA	False	NA	NA	False	NA	NA	NA	102070954	102071895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102071000_102071900
ES.1289.1	chr1	-	159	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	131750122	131749963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131750000_131750100
ES.12890.1	chr15	+	1789	1	Intergenic	novelGene_10739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTCCTCTCCATGGTT	145	False	NA	NA	False	NA	NA	NA	102103224	102105013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102103200_102105000
ES.12891.1	chr15	+	4418	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	-176	-1	-176	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	730	False	NA	25	True	AATAAA	-26	NA	102111906	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.10	chr15	+	4226	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-149	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.0686520039925	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTTTGAGAAGACTTGA	757	False	NA	27	True	AATAAA	-28	NA	102111933	102124043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.11	chr15	+	4426	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-149	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.1629603435456	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	757	False	NA	16	True	AATAAA	-17	NA	102111933	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102115145_102115231_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.12	chr15	+	4313	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	757	False	NA	24	True	AATAAA	-25	NA	102111933	102124040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.14	chr15	+	4234	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-148	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.0988610486562	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCAGTGTATGTTCCT	758	False	NA	7	True	TATAAA	-20	NA	102111934	102123967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113319_102113663_102113741_102115145_102115231_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.16	chr15	+	4380	7	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-147	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.6076304884904	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	759	False	NA	19	True	AATAAA	-20	NA	102111935	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113592_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
ES.12891.18	chr15	+	4181	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.2157658862373	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	764	False	NA	25	True	AATAAA	-26	NA	102111940	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.20	chr15	+	4528	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-142	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.3359134524477	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	764	False	NA	16	True	AATAAA	-17	NA	102111940	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102115145_102115231_102116173_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.21	chr15	+	4139	7	FSM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	-185	-2965	-142	0	multi-exon	FALSE	canonical	0	0	junction_4	67.1203314122397	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	764	False	NA	24	True	AATAAA	-25	NA	102111940	102124040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.22	chr15	+	4253	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-141	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.274064643576	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	765	False	NA	19	True	AATAAA	-20	NA	102111941	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117589_102117709_102121030
ES.12891.23	chr15	+	4467	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.2345377959315	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	766	False	NA	25	True	AATAAA	-26	NA	102111942	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102115145_102115231_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.27	chr15	+	4288	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-135	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	54.8746045290736	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	771	False	NA	24	True	AATAAA	-25	NA	102111947	102124040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.28	chr15	+	4204	6	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	-129	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.3716807079646	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	777	False	NA	23	True	AATAAA	-24	NA	102111953	102124039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.3	chr15	+	4438	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-160	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	746	False	NA	25	True	AATAAA	-26	NA	102111922	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.31	chr15	+	4506	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-125	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.6247723129192	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTCCTCTTTGAGAAG	781	False	NA	21	True	AATAAA	-22	NA	102111957	102124037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116464_102116604_102116706_102116801_102117187_102117312_102117589_102117709_102121030
ES.12891.32	chr15	+	4607	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-114	0	intron_retention	FALSE	canonical	1	1	junction_1	60.1063682999071	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	792	False	NA	20	True	AATAAA	-21	NA	102111968	102124036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102112789_102113522_102113663_102113741_102116205_102116356_102116670_102116801_102117187_102117312_102117589_102117709_102121030
ES.12891.33	chr15	+	4471	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-111	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.3359134524477	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCCTCTTTGAGAAGA	795	False	NA	22	True	AATAAA	-23	NA	102111971	102124038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102113663_102113741_102115145_102115231_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.34	chr15	+	4581	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-24	-68	intron_retention	FALSE	canonical	3	77	junction_4	38.6896483427918	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGCAGTGTATGTTC	882	False	NA	5	True	TATAAA	-18	NA	102112058	102123965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102117312_102117589_102117709_102121030
ES.12891.35	chr15	+	3983	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.6824694190945	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	885	False	NA	25	True	AATAAA	-26	NA	102112061	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.37	chr15	+	3880	6	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.9226419084005	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	891	False	NA	16	True	AATAAA	-17	NA	102112067	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.39	chr15	+	4676	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	85	junction_2	32.2076595444831	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	898	False	NA	24	True	AATAAA	-25	NA	102112074	102124040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102117312_102117589_102117709_102121030
ES.12891.40	chr15	+	4944	6	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	85	junction_2	30.5574868076548	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	904	False	NA	20	True	AATAAA	-21	NA	102112080	102124036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102117709_102121030
ES.12891.41	chr15	+	4146	7	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.0240201256022	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	906	False	NA	25	True	AATAAA	-26	NA	102112082	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102116260_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.42	chr15	+	4149	9	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.2728558568857	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCATGTCCTCTTTGA	912	False	NA	17	True	AATAAA	-18	NA	102112088	102124033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113319_102113397_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.43	chr15	+	4072	8	NNC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.0027828810659	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	912	False	NA	20	True	AATAAA	-21	NA	102112088	102124036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113319_102115145_102115231_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.44	chr15	+	4023	6	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	65.3831782647494	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	918	False	NA	19	True	AATAAA	-20	NA	102112094	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117589_102117709_102121030
ES.12891.45	chr15	+	4342	7	NNC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_5	60.3556588527998	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	925	False	NA	16	True	AATAAA	-17	NA	102112101	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102112789_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.46	chr15	+	4210	7	NNC	ENSMUSG00000046897.18	novel	989	7	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.0240201256022	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	927	False	NA	23	True	AATAAA	-24	NA	102112103	102124039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102116173_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.5	chr15	+	1725	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-160	396	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.0686520039925	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAGGTAATGTGGAGGG	746	False	NA	NA	False	TTTAAA	-14	NA	102111922	102121531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.50	chr15	+	3778	6	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	80.5719554187436	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	934	False	NA	19	True	AATAAA	-20	NA	102112110	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.51	chr15	+	4215	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.9456045590808	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	939	False	NA	19	True	AATAAA	-20	NA	102112115	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102113005_102113522_102115145_102115231_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
ES.12891.54	chr15	+	4354	4	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	-9	-67	intron_retention	FALSE	canonical	0	0	junction_2	76.1416808033258	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGCAGTGTATGTTCC	958	False	NA	6	True	TATAAA	-19	NA	102112134	102123966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113319_102116706_102117709_102121030
ES.12891.55	chr15	+	4402	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-9	1	intron_retention	FALSE	canonical	0	0	junction_5	63.3007076724797	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTCCTCTTTGAGAAG	958	False	NA	21	True	AATAAA	-22	NA	102112134	102124037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102112789_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.56	chr15	+	4215	6	NNC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_4	66.1797552126026	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCATGTCCTCTTTGA	976	False	NA	17	True	AATAAA	-18	NA	102112152	102124033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102112238_102112789_102113522_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.57	chr15	+	4808	7	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	175	-1	intron_retention	FALSE	canonical	0	0	junction_4	56.6235129802295	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	1142	False	NA	23	True	AATAAA	-24	NA	102112318	102124039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.58	chr15	+	4888	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	195	0	intron_retention	FALSE	canonical	0	0	junction_3	70.3495644939597	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	1162	False	NA	20	True	AATAAA	-21	NA	102112338	102124036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102113522_102113663_102113741_102116205_102116356_102116464_102116604_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.59	chr15	+	4624	6	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	283	0	intron_retention	FALSE	canonical	0	0	junction_3	68.3900577569576	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	1250	False	NA	24	True	AATAAA	-25	NA	102112426	102124040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.60	chr15	+	4569	6	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	301	-1	intron_retention	FALSE	canonical	0	0	junction_3	67.691653842996	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	1268	False	NA	23	True	AATAAA	-24	NA	102112444	102124039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.61	chr15	+	4425	6	NNC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	303	-1	intron_retention	FALSE	canonical	0	0	junction_3	75.7707067407979	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	1270	False	NA	16	True	AATAAA	-17	NA	102112446	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102113319_102116173_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.62	chr15	+	4266	5	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	313	-1	intron_retention	FALSE	canonical	0	0	junction_3	65.530050358595	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCTCTTTGAGAAGAC	1280	False	NA	23	True	AATAAA	-24	NA	102112456	102124039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102113319_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.63	chr15	+	4548	6	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	313	0	intron_retention	FALSE	canonical	0	0	junction_4	53.8976808406447	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	1280	False	NA	25	True	AATAAA	-26	NA	102112456	102124041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117589_102117709_102121030
ES.12891.65	chr15	+	4684	8	NNC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	345	-1	intron_retention	FALSE	canonical	0	0	junction_2	66.4646599360003	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCCATGTCCTCTTTG	1312	False	NA	16	True	AATAAA	-17	NA	102112488	102124032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102113522_102113663_102113741_102115145_102115231_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
ES.12891.66	chr15	+	4352	6	ISM	ENSMUSG00000046897.18	ENSMUST00000141465.9	989	7	363	-2958	345	0	3prime_fragment	FALSE	canonical	0	0	junction_3	68.9422947108667	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCATGTCCTCTTTGA	1312	False	NA	17	True	AATAAA	-18	NA	102112488	102124033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102113319_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.68	chr15	+	4585	7	ISM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	419	5	358	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	57.2247032903332	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	1325	False	NA	19	True	AATAAA	-20	NA	102112501	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ES.12891.7	chr15	+	2574	2	ISM	ENSMUSG00000046897.18	ENSMUST00000139960.8	998	5	-211	2025	-150	-1586	5prime_fragment	FALSE	canonical	3	160	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAGAA	756	False	NA	NA	False	NA	NA	NA	102111932	102115274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102112238_102113005
ES.12891.70	chr15	+	6282	3	NIC	ENSMUSG00000046897.18	novel	3882	7	NA	NA	-878	1	intron_retention	FALSE	canonical	3	121	junction_1	21	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTCCTCTTTGAG	1072	False	NA	18	True	AATAAA	-19	NA	102114115	102124034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102116356_102116670_102117709_102121030
ES.12891.71	chr15	+	3388	1	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	3951	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCCTCTTTGAGA	1564	False	NA	19	True	AATAAA	-20	NA	102120647	102124035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102120600_102124000
ES.12891.72	chr15	+	1322	1	Genic_Genomic	ENSMUSG00000046897.18	novel	NA	NA	NA	NA	6230	207	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGGACTCTCAACAGT	3843	False	NA	NA	False	NA	NA	NA	102122926	102124248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102122900_102124200
ES.12891.9	chr15	+	4345	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	757	False	NA	20	True	AATAAA	-21	NA	102111933	102124036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ES.12892.1	chr15	-	3188	13	NIC	ENSMUSG00000023044.3	novel	1786	14	NA	NA	35	3	intron_retention	FALSE	canonical	0	0	junction_12	45.6204145336517	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATGTTTTAAAGCTT	6667	False	NA	NA	False	AATAAA	-20	NA	102112293	102085430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087268_102087395_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.10	chr15	-	2250	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	50.9959970583607	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6647	False	NA	NA	False	AATAAA	-18	NA	102112313	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087395_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.11	chr15	-	2428	16	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.2402994716616	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6655	False	NA	NA	False	AATAAA	-18	NA	102112305	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102087395_102087596_102087955_102087994_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
ES.12892.13	chr15	-	3338	13	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_12	37.0295490115664	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6656	False	NA	NA	False	AATAAA	-17	NA	102112304	102085433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087268_102087395_102087596_102087955_102088038_102088263_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.14	chr15	-	4252	3	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-2117	0	intron_retention	FALSE	canonical	3	13	junction_2	65	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	9809	False	NA	NA	False	AATAAA	-17	NA	102090413	102085433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087596_102087955_102088038_102088405
ES.12892.15	chr15	-	2420	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	36.5440124199574	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6273	False	NA	NA	False	AATAAA	-16	NA	102112687	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112573
ES.12892.16	chr15	-	3012	19	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	46.9971104969415	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6640	False	NA	NA	False	AATAAA	-16	NA	102112320	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102109132_102109518_102110878_102111010_102111571_102111696_102112130
ES.12892.17	chr15	-	2692	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	29	-1	intron_retention	FALSE	canonical	0	0	junction_14	34.5333320200667	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6661	False	NA	NA	False	AATAAA	-16	NA	102112299	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.2	chr15	-	3031	19	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	125	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	46.0995969560057	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6934	False	NA	NA	False	AATAAA	-18	NA	102112026	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102109132_102109518_102110878_102111010_102111571_102111696_102111819
ES.12892.20	chr15	-	1380	6	NIC	ENSMUSG00000023044.3	novel	1391	13	NA	NA	-278	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	45.4954942824012	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	102088574	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088405
ES.12892.21	chr15	-	3440	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_13	35.7779145786564	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6653	False	NA	NA	False	AATAAA	-16	NA	102112307	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.22	chr15	-	2746	19	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	48.4848200757493	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6640	False	NA	NA	False	AATAAA	-16	NA	102112320	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102097577_102097697_102110878_102111010_102111571_102111696_102112130
ES.12892.24	chr15	-	2253	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	33.5556193779333	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6240	False	NA	NA	False	AATAAA	-16	NA	102112720	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112573
ES.12892.25	chr15	-	2471	18	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	45.4072689027225	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	7109	False	NA	NA	False	AATAAA	-16	NA	102111851	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094490_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102111819
ES.12892.26	chr15	-	2324	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	28.5420547418873	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6245	False	NA	NA	False	AATAAA	-16	NA	102112715	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112573
ES.12892.27	chr15	-	2575	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	47.1047701936863	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6640	False	NA	NA	False	AATAAA	-16	NA	102112320	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
ES.12892.28	chr15	-	2613	13	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_12	45.5218964406752	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGGTATGTTTTAAA	6626	False	NA	NA	False	AATAAA	-16	NA	102112334	102085434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.29	chr15	-	2446	17	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	149	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	45.705878656361	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGGTATGTTTTA	7262	False	NA	NA	False	AATAAA	-14	NA	102111698	102085436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094486_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111561
ES.12892.3	chr15	-	2438	17	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.5285687113551	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6657	False	NA	NA	False	AATAAA	-18	NA	102112303	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087054_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111651_102112130
ES.12892.30	chr15	-	2789	16	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	4	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	33.4241429708128	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	7098	False	NA	NA	False	AATAAA	-13	NA	102111862	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111252
ES.12892.31	chr15	-	2352	1	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-335	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	102087789	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102085400_102087800
ES.12892.32	chr15	-	2672	18	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	39.6618928436936	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6663	False	NA	NA	False	AATAAA	-13	NA	102112297	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111767_102112130
ES.12892.33	chr15	-	3630	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	18	junction_12	39.8393222536872	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6262	False	NA	NA	False	AATAAA	-13	NA	102112698	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087052_102087215_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102111571_102111696_102112573
ES.12892.34	chr15	-	2291	15	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.0377941202339	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6642	False	NA	NA	False	AATAAA	-13	NA	102112318	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102112130
ES.12892.35	chr15	-	3336	12	NIC	ENSMUSG00000023044.3	novel	1786	14	NA	NA	8	-4	intron_retention	FALSE	canonical	0	0	junction_11	47.2583894340553	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6640	False	NA	NA	False	AATAAA	-13	NA	102112320	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.36	chr15	-	3041	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	24	-4	intron_retention	FALSE	canonical	0	0	junction_13	45.7568826264673	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	6656	False	NA	NA	False	AATAAA	-13	NA	102112304	102085437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087052_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.37	chr15	-	3027	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	-6	intron_retention	FALSE	canonical	0	0	junction_13	43.8566788986999	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATATTTTGGTATGTT	6655	False	NA	NA	False	AATAAA	-11	NA	102112305	102085439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.38	chr15	-	2314	16	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	33.4241429708128	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATATTTTGGTATGTT	6655	False	NA	NA	False	AATAAA	-11	NA	102112305	102085439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097360_102112130
ES.12892.39	chr15	-	2220	18	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	84	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	39.6618928436936	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCATTAAAATTATG	6893	False	NA	NA	False	AAAAAG	-4	NA	102112067	102085723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102111995
ES.12892.4	chr15	-	2524	17	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	46.5965060385433	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6655	False	NA	NA	False	AATAAA	-18	NA	102112305	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
ES.12892.40	chr15	-	3807	14	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	1114	20	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	32.2504988264711	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATTTTTCATTAAAAT	842	False	NA	NA	False	AAGAAA	-5	NA	102099380	102085727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ES.12892.41	chr15	-	99	1	Intergenic	novelGene_10738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	102089233	102089134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102089100_102089200
ES.12892.42	chr15	-	3743	4	NIC	ENSMUSG00000023044.3	novel	825	8	NA	NA	1086	77	intron_retention	FALSE	canonical	3	110	junction_2	14.7044966667418	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACCAAAAAAAAAA	814	False	NA	NA	False	NA	NA	NA	102099408	102094767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102094909_102095488_102096533_102096616_102096744_102096977
ES.12892.43	chr15	-	240	1	Intergenic	novelGene_10740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAAGGCCAACCTGGT	8168	False	NA	NA	False	NA	NA	NA	102110792	102110552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102110600_102110800
ES.12892.5	chr15	-	2368	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6646	False	NA	NA	False	AATAAA	-18	NA	102112314	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.6	chr15	-	2593	18	NNC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	43.6237451609615	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6634	False	NA	NA	False	AATAAA	-18	NA	102112326	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110920_102111010_102111571_102111696_102112130
ES.12892.7	chr15	-	3324	14	NIC	ENSMUSG00000023044.3	novel	1786	14	NA	NA	-38	1	intron_retention	FALSE	canonical	0	0	junction_13	35.594860343036	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6594	False	NA	NA	False	AATAAA	-18	NA	102112366	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
ES.12892.9	chr15	-	2802	18	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	143	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.6618928436936	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGTATGTTTTAAAGC	6467	False	NA	NA	False	AATAAA	-18	NA	102112493	102085432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
ES.12893.1	chr15	+	179	1	Intergenic	novelGene_10741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGACCACGTGA	NA	False	NA	NA	False	NA	NA	NA	102129511	102129690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102129500_102129700
ES.12894.1	chr15	-	2659	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	25	-1	-11	1	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCCTCTACTTTACTT	NA	False	NA	0	True	AATAAA	-15	NA	102140354	102124428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
ES.12894.2	chr15	-	2098	12	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	7274	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	13.1381722567461	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGCCTCTACTTTAC	3158	False	NA	-2	True	AATAAA	-13	NA	102133069	102124430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102124703_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992
ES.12894.3	chr15	-	2713	16	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	16.3062360259299	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGCCTCTACTTTAC	NA	False	NA	-2	True	AATAAA	-13	NA	102140341	102124430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140045_102140115_102140285
ES.12894.4	chr15	-	3039	15	NNC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	12.8030608585189	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGCCTCTACTTTAC	NA	False	NA	-2	True	AATAAA	-13	NA	102140374	102124430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133557_102135832_102136037_102140285
ES.12894.6	chr15	-	2439	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	12.7794213275663	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGAGCCTCTACTTTA	NA	False	NA	-3	True	AATAAA	-12	NA	102140341	102124431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102140285
ES.12894.7	chr15	-	2622	15	NNC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	12.8603170684879	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTGCCCCAGACTT	NA	False	NA	-18	True	NA	NA	NA	102140341	102124446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127750_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
ES.12894.8	chr15	-	184	1	Intergenic	novelGene_10742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGCTGCTCTTTAT	1800	False	NA	NA	False	NA	NA	NA	102134427	102134243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102134200_102134400
ES.12895.1	chr15	+	533	1	Intergenic	novelGene_10743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTTAACTTGTAAACA	1578	False	NA	NA	False	NA	NA	NA	102152694	102153227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102152700_102153200
ES.12896.11	chr15	-	2881	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	63	9	63	-7	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCAATCCGGGTGTGG	NA	False	NA	-9	True	AATAAA	-7	NA	102165889	102143381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
ES.12896.2	chr15	-	3065	6	NIC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	58	junction_5	9.14330356052997	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	False	NA	0	True	AATAAA	-16	NA	102154924	102143372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102144659_102147239_102147399_102147824_102148724_102149492_102149635_102150270_102150420_102154494
ES.12896.3	chr15	-	2871	11	NNC	ENSMUSG00000001288.16	novel	2953	10	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.2825028257856	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102165817	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102161583_102161639_102164904_102164975_102165674
ES.12896.4	chr15	-	3095	7	NIC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	49	0	intron_retention	FALSE	canonical	3	57	junction_3	9.85590629464835	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102154886	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102144659_102147239_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ES.12896.5	chr15	-	2459	9	NNC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	-1267	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.2973120941391	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102156202	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494_102154656_102156181
ES.12896.6	chr15	-	2421	9	NNC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.450109300287	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102158772	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102158348_102158433_102158712
ES.12896.7	chr15	-	2249	6	NNC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	2893	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.4253408071038	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102149131	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102148868
ES.12896.8	chr15	-	2921	10	NNC	ENSMUSG00000001288.16	novel	2953	10	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.4764266094289	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102165662	102143374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165414
ES.12896.9	chr15	-	2607	8	NNC	ENSMUSG00000001288.16	novel	2718	8	NA	NA	49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.9442101598088	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCGGGTGTGGATCCC	NA	False	NA	-4	True	AATAAA	-12	NA	102154886	102143376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148622_102148724_102149492_102149635_102150270_102150420_102154494
ES.12897.1	chr15	-	183	1	Intergenic	novelGene_10744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	102177378	102177195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102177200_102177400
ES.12898.1	chr15	+	1776	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	-27	5	-27	-5	multi-exon	FALSE	canonical	3	355	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTTGTCCTCTCCTGT	NA	False	NA	22	True	AATAAA	-18	NA	102187861	102190184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102188065_102188611
ES.12898.10	chr15	+	7005	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-3	0	intron_retention	FALSE	canonical	3	251	junction_5	48.3978507988739	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	356	False	NA	17	True	AATAAA	-17	NA	102204697	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.11	chr15	+	6690	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	69.6461213724226	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	356	False	NA	17	True	AATAAA	-17	NA	102204697	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.12	chr15	+	7026	30	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_27	75.3715962863589	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	363	False	NA	17	True	AATAAA	-17	NA	102204704	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231856_102231969_102232077_102232243_102232442
ES.12898.13	chr15	+	6499	30	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	111.515769934634	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	369	False	NA	17	True	AATAAA	-17	NA	102204710	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212383_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231711_102231884_102231969_102232077_102232243_102232442
ES.12898.14	chr15	+	6639	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	81.2861133418385	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	369	False	NA	17	True	AATAAA	-17	NA	102204710	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217641_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.15	chr15	+	6555	32	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	80.2026050474645	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	369	False	NA	17	True	AATAAA	-17	NA	102204710	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225128_102225220_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.16	chr15	+	6554	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	75.1147833503137	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	373	False	NA	17	True	AATAAA	-17	NA	102204714	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.17	chr15	+	6575	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	74.7723656618317	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	373	False	NA	14	True	AATAAA	-14	NA	102204714	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204785_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.18	chr15	+	6817	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	138	junction_1	57.9115525533885	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	378	False	NA	16	True	AATAAA	-16	NA	102204719	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231969_102232077_102232243_102232442
ES.12898.2	chr15	+	3076	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	10	-1332	10	1332	multi-exon	FALSE	canonical	3	355	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTTGCAATCATTTAAC	NA	False	NA	NA	False	AAAACA	-3	NA	102187898	102191521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102188065_102188611
ES.12898.22	chr15	+	5931	27	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.4659392774731	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	388	False	NA	17	True	AATAAA	-17	NA	102204729	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213496_102219097_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.24	chr15	+	6068	28	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	83.5993449741667	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	388	False	NA	17	True	AATAAA	-17	NA	102204729	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228304_102231139_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.25	chr15	+	6435	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.2861133418385	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	390	False	NA	17	True	AATAAA	-17	NA	102204731	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206810_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.27	chr15	+	6377	30	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	98.7304429075358	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	390	False	NA	14	True	AATAAA	-14	NA	102204731	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220939_102221022_102221370_102221500_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.28	chr15	+	6573	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1885407935722	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	391	False	NA	17	True	AATAAA	-17	NA	102204732	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205247_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.29	chr15	+	6407	27	NNC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_21	78.6377075788355	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	392	False	NA	16	True	AATAAA	-16	NA	102204733	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228304_102231139_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.3	chr15	+	2283	1	NIC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	13	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTTGTCCTCTCCTGT	NA	False	NA	22	True	AATAAA	-18	NA	102187901	102190184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102187900_102190200
ES.12898.30	chr15	+	4260	10	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	1	8357	intron_retention	FALSE	canonical	3	138	junction_1	47.9907398475072	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTAGATGTTCCGGG	392	False	NA	NA	False	NA	NA	NA	102204733	102215391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669
ES.12898.31	chr15	+	6634	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	80.6340429898494	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTTTGTGAGAGTTGAA	393	False	NA	13	True	AATAAA	-13	NA	102204734	102232788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225470_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.32	chr15	+	6599	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1885407935722	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	393	False	NA	14	True	AATAAA	-14	NA	102204734	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204829_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.33	chr15	+	8169	29	NIC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	2	-2	intron_retention	FALSE	canonical	3	258	junction_4	47.1933171505614	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTGAGAGTTGAAGC	393	False	NA	15	True	AATAAA	-15	NA	102204734	102232790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.34	chr15	+	6518	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	79.1345127351296	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	393	False	NA	16	True	AATAAA	-16	NA	102204734	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.35	chr15	+	7164	29	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_14	77.7738086126843	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	393	False	NA	17	True	AATAAA	-17	NA	102204734	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222423_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.36	chr15	+	6694	31	NNC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	97.9161999988879	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	393	False	NA	17	True	AATAAA	-17	NA	102204734	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229217_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232441
ES.12898.37	chr15	+	6830	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-3	0	intron_retention	FALSE	canonical	3	41	junction_1	69.6927177746746	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	395	False	NA	17	True	AATAAA	-17	NA	102204736	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231969_102232077_102232243_102232442
ES.12898.4	chr15	+	6649	31	Fusion	ENSMUSG00000045665.6_ENSMUSG00000058290.5	novel	447	5	NA	NA	90	1	multi-exon	TRUE	canonical	0	0	junction_1	75.1885407935722	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGAGAGTTGAAGCTAC	NA	False	NA	18	True	AATAAA	-18	NA	102187978	102232793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102188065_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.40	chr15	+	7106	28	ISM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	39	1	0	-1	intron_retention	FALSE	canonical	3	138	junction_1	55.3159524489643	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	398	False	NA	16	True	AATAAA	-16	NA	102204739	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589
ES.12898.41	chr15	+	6559	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	80.8095428908135	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	398	False	NA	14	True	AATAAA	-14	NA	102204739	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213417_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.42	chr15	+	6528	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	81.0848732296392	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	398	False	NA	16	True	AATAAA	-16	NA	102204739	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220939_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.44	chr15	+	7923	28	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	4	-3	intron_retention	FALSE	canonical	3	7	junction_1	76.799884259172	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	402	False	NA	14	True	AATAAA	-14	NA	102204743	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102204851_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102212581_102213360_102213601_102214099_102214245_102214332_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.46	chr15	+	6647	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.3469206085035	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	403	False	NA	14	True	AATAAA	-14	NA	102204744	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213353_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.47	chr15	+	6619	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	81.3606579783292	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	405	False	NA	14	True	AATAAA	-14	NA	102204746	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217778_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.48	chr15	+	6796	29	NIC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	9	-1	intron_retention	FALSE	canonical	2	8	junction_14	76.6668764785653	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	407	False	NA	16	True	AATAAA	-16	NA	102204748	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.49	chr15	+	6106	26	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_15	100.374690036881	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	410	False	NA	17	True	AATAAA	-17	NA	102204751	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102205285_102206618_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102224085_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228304_102231139_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.5	chr15	+	3237	3	NNC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	90	10044	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	177.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	102187978	102200233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102188065_102188611_102190916_102199386
ES.12898.51	chr15	+	5939	27	NNC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	90.3864893422756	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	413	False	NA	17	True	AATAAA	-17	NA	102204754	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213504_102219097_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.52	chr15	+	5817	29	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	84.2046523025168	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	419	False	NA	14	True	AATAAA	-14	NA	102204760	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221412_102224045_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.53	chr15	+	6606	31	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.9357962370917	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	420	False	NA	16	True	AATAAA	-16	NA	102204761	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205186_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229204_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.54	chr15	+	5896	27	NNC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.3864893422756	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTGAGAGTTGAAGC	446	False	NA	15	True	AATAAA	-15	NA	102204787	102232790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213496_102219097_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.55	chr15	+	6748	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	92	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	74.9109174657176	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	490	False	NA	14	True	AATAAA	-14	NA	102204831	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102205075_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.56	chr15	+	7337	29	NIC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	272	-1	intron_retention	FALSE	canonical	3	251	junction_5	49.2344453837443	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	670	False	NA	16	True	AATAAA	-16	NA	102205011	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.58	chr15	+	7244	21	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	6358	-3	intron_retention	FALSE	canonical	3	251	junction_1	44.1190151748654	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	6756	False	NA	14	True	AATAAA	-14	NA	102211097	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102231408_102231589_102231969_102232077
ES.12898.59	chr15	+	6630	24	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	6671	-1	intron_retention	FALSE	canonical	3	261	junction_1	44.9591286772527	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	7069	False	NA	16	True	AATAAA	-16	NA	102211410	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.6	chr15	+	1728	2	NNC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	236	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCACTTGTCCTCTCCTG	NA	False	NA	21	True	AATAAA	-17	NA	102188124	102190183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102188281_102188611
ES.12898.60	chr15	+	4839	25	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	8716	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	101.845743924602	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	9114	False	NA	16	True	AATAAA	-16	NA	102213455	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102229323_102229445_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.62	chr15	+	4619	24	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	9442	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	121.600915328363	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	9840	False	NA	14	True	AATAAA	-14	NA	102214181	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102221861_102221996_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228141_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.63	chr15	+	4331	20	ISM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	12747	4	-7472	-4	3prime_fragment	FALSE	canonical	3	283	junction_6	36.6147117852042	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTTTGTGAGAGTTGAA	NA	False	NA	13	True	AATAAA	-13	NA	102217447	102232788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.64	chr15	+	3511	19	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-7271	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	115.883189377264	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	NA	False	NA	14	True	AATAAA	-14	NA	102217648	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102222421_102222532_102224085_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.65	chr15	+	3723	17	ISM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	16668	2	-3551	-2	3prime_fragment	FALSE	canonical	3	283	junction_3	37.8085225180779	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTGAGAGTTGAAGC	NA	False	NA	15	True	AATAAA	-15	NA	102221368	102232790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.66	chr15	+	3391	15	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-3264	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	99.8288586552414	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	NA	False	NA	14	True	AATAAA	-14	NA	102221655	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.67	chr15	+	3840	15	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-3208	-2	intron_retention	FALSE	canonical	3	283	junction_2	38.8577337139951	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTGAGAGTTGAAGC	NA	False	NA	15	True	AATAAA	-15	NA	102221711	102232790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102221775_102222421_102222532_102223622_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.68	chr15	+	3983	14	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-2703	-1	intron_retention	FALSE	canonical	3	283	junction_1	38.4764586445074	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGAGAGTTGAAGCT	NA	False	NA	16	True	AATAAA	-16	NA	102222216	102232791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102222532_102223622_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.69	chr15	+	4389	15	NNC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	-2576	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.335483173569	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	NA	False	NA	17	True	AATAAA	-17	NA	102222343	102232792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102222532_102223622_102224612_102224953_102225327_102225484_102226418_102227743_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.7	chr15	+	6863	32	NNC	ENSMUSG00000058290.5	novel	6635	31	NA	NA	-13375	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.5960868669415	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	NA	False	NA	14	True	AATAAA	-14	NA	102191325	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102191471_102204695_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229206_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12898.71	chr15	+	177	1	Genic_Genomic	ENSMUSG00000058290.5	novel	NA	NA	NA	NA	-114	2096	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2715	False	NA	NA	False	NA	NA	NA	102227430	102227607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102227400_102227600
ES.12898.72	chr15	+	3374	3	FSM	ENSMUSG00000058290.5	ENSMUST00000230222.2	296	3	-2010	-1068	1568	-3	multi-exon	FALSE	canonical	3	361	junction_1	32.5	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTGAGAGTTGAAG	4397	False	NA	14	True	AATAAA	-14	NA	102229112	102232789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102231182_102231302_102231408_102231589
ES.12898.8	chr15	+	6666	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	-3	-5	-3	5	multi-exon	FALSE	canonical	3	138	junction_1	58.1614706370692	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTGAAGCTACTCCC	356	False	NA	22	True	AATAAA	-22	NA	102204697	102232797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ES.12899.1	chr15	-	2266	1	Intergenic	novelGene_10745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	9673	False	NA	NA	False	NA	NA	NA	102194609	102192343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102192300_102194600
ES.129.1	chr1	+	154	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	14003305	14003459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_14003300_14003500
ES.1290.1	chr1	+	5273	2	Genic_Genomic	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-84557	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTCGTGTGCTTCT	3202	False	NA	29	True	TATAAA	-20	NA	131753714	131864061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_131753803_131858876
ES.1290.10	chr1	+	4429	12	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.9613965318982	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5237	False	NA	21	True	AATAAA	-18	NA	131755749	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757748_131758139_131758371_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770769_131771656_131771792_131772075_131772225_131774287
ES.1290.11	chr1	+	3449	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	37	1211	37	1025	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGGCTCCGTTGGCCTTT	5239	False	NA	NA	False	NA	NA	NA	131755751	131775392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.12	chr1	+	4896	11	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.9988297726656	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTGTATCCCTGTGT	5239	False	NA	19	True	AATAAA	-16	NA	131755751	131776599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769253_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.13	chr1	+	4685	11	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.9685000825021	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5239	False	NA	21	True	AATAAA	-18	NA	131755751	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768565_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.14	chr1	+	3606	10	ISM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	57	3097	57	-861	5prime_fragment	FALSE	canonical	3	130	junction_4	12.7463381330667	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAACCGTATGTCAGTCT	5259	False	NA	NA	False	AATAAA	-13	NA	131755771	131773506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075
ES.1290.16	chr1	+	4387	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	199	111	199	-111	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTGTGTCTTAAGAG	5401	False	NA	-88	True	AAGAAA	-35	NA	131755913	131776492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.17	chr1	+	2734	12	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	199	348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.6491239101108	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCAATTCCACGGTGG	5401	False	NA	NA	False	AGTAAA	-23	NA	131755913	131774715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131756527_131756652_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.19	chr1	+	3034	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	224	1439	224	797	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGAGTTCAAGCCTCC	5426	False	NA	NA	False	NA	NA	NA	131755938	131775164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.2	chr1	+	6328	10	NIC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	130	junction_3	12.7463381330667	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5186	False	NA	21	True	AATAAA	-18	NA	131755698	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.20	chr1	+	3923	12	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	224	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.8204867561459	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTGTATCCCTGTGT	5426	False	NA	19	True	AATAAA	-16	NA	131755938	131776599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757748_131758139_131758684_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.21	chr1	+	6328	8	NIC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	-5939	-2	intron_retention	FALSE	canonical	3	130	junction_2	12.6135657455109	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	3078	False	NA	21	True	AATAAA	-18	NA	131764638	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.22	chr1	+	3590	8	ISM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	11798	4	-3065	-4	3prime_fragment	FALSE	canonical	3	130	junction_1	13.5631553730491	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTGTATCCCTGTGT	5952	False	NA	19	True	AATAAA	-16	NA	131767512	131776599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.23	chr1	+	143	2	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	518	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAACTTCA	NA	False	NA	NA	False	NA	NA	NA	131779599	131779901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131779648_131779806
ES.1290.24	chr1	+	110	2	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	131779599	131779880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131779641_131779811
ES.1290.26	chr1	+	1235	6	NNC	ENSMUSG00000026433.14	novel	1226	6	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.3174888999777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGGTTGTGATGCTG	NA	False	NA	13	True	ATTAAA	-15	NA	131794991	131800623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131795174_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ES.1290.27	chr1	+	2087	5	NNC	ENSMUSG00000026433.14	novel	1202	5	NA	NA	35	-65	intron_retention	FALSE	non_canonical	0	0	junction_3	38.7136926680987	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTCTTGCCAATGGC	NA	False	NA	NA	False	CATAAA	-20	NA	131795012	131800412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131795514_131797670_131797743_131798417_131799069_131799272_131799927_131800203
ES.1290.28	chr1	+	2445	1	NIC	ENSMUSG00000026433.14	novel	1202	5	NA	NA	35	-1260	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCATTTACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	131795012	131797457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131795000_131797500
ES.1290.29	chr1	+	1280	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	68	-146	52	-2	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGGTTGTGATGCTG	NA	False	NA	13	True	ATTAAA	-15	NA	131795029	131800623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ES.1290.3	chr1	+	4705	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	-10	2	-10	-2	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5192	False	NA	21	True	AATAAA	-18	NA	131755704	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.30	chr1	+	3797	2	ISM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	86	-524	70	376	intron_retention	FALSE	canonical	3	82	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGGTGTCTATGCCT	NA	False	NA	NA	False	NA	NA	NA	131795047	131801001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131795514_131797670
ES.1290.31	chr1	+	867	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	270	65	-17	-65	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTCTTGCCAATGGC	NA	False	NA	NA	False	CATAAA	-20	NA	131795231	131800412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ES.1290.32	chr1	+	171	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAATAACAACAAAAA	5979	False	NA	NA	False	NA	NA	NA	131803407	131803578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131803400_131803600
ES.1290.33	chr1	+	5962	8	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-30468	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.267638119219	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTCGTGTGCTTCT	NA	False	NA	29	True	TATAAA	-20	NA	131807803	131864061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131807860_131836624_131836726_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.34	chr1	+	674	3	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAACATTCTTTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	131807805	131812554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131807860_131811662_131811895_131812166
ES.1290.35	chr1	+	2040	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTTTGGAAATTAAGCT	NA	False	NA	NA	False	NA	NA	NA	131812662	131814702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131812700_131814700
ES.1290.36	chr1	+	5963	8	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-9313	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.267638119219	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGCTTCGTGTGCT	605	False	NA	26	True	TATAAA	-17	NA	131828958	131864058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131829019_131836624_131836726_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.38	chr1	+	178	1	NIC	ENSMUSG00000100026.2	novel	450	3	NA	NA	354	-258	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATCTTTGGTAT	6267	False	NA	NA	False	NA	NA	NA	131835256	131835434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131835300_131835400
ES.1290.39	chr1	+	6296	7	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-2042	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	570.573882644093	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGTGTGCTTCGTGTG	7240	False	NA	24	True	TATAAA	-15	NA	131836229	131864056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131836726_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.40	chr1	+	1179	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-148	4967	-126	1283	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCATTGGGTTTTTTGT	9156	False	NA	39	True	NA	NA	NA	131838145	131859092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.41	chr1	+	6131	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-131	-2	-109	2	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTCGTGTGCTTCT	9173	False	NA	29	True	TATAAA	-20	NA	131838162	131864061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.42	chr1	+	1713	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-126	4411	-104	-769	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAAGTGTCAAAAAGA	9178	False	NA	71	True	NA	NA	NA	131838167	131859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.43	chr1	+	5964	6	NIC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-95	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	634.617554122166	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGCTTCGTGTGCT	9187	False	NA	26	True	TATAAA	-17	NA	131838176	131864058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131858771
ES.1290.45	chr1	+	2831	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-117	3284	-95	358	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACTTGAACATAAGCA	9187	False	NA	NA	False	AATAAA	-23	NA	131838176	131860775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.46	chr1	+	4956	8	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	539.015201784794	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9187	False	NA	27	True	TATAAA	-18	NA	131838176	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771_131859001_131860159
ES.1290.5	chr1	+	2700	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	-7	2004	-7	232	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTATTTTCAATGGG	5195	False	NA	NA	False	NA	NA	NA	131755707	131774599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.52	chr1	+	5009	5	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-52	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	654.540678644192	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGATGTGTGCTTCGT	9230	False	NA	21	True	TATAAA	-12	NA	131838219	131864053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131859525
ES.1290.53	chr1	+	2099	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-68	3967	-46	-325	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTGAGATTTATCCT	9236	False	NA	NA	False	AATAAA	-28	NA	131838225	131860092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.55	chr1	+	6054	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	581.39413386178	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGCTTCGTGTGCTTC	9242	False	NA	28	True	TATAAA	-19	NA	131838231	131864060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857494_131858771
ES.1290.57	chr1	+	1985	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-56	4069	-34	-427	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCGATGATGAATTTACC	9248	False	NA	NA	False	ATTAAA	-16	NA	131838237	131859990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.58	chr1	+	1352	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-56	4702	-34	-1060	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTCTCAGTCTTTTC	9248	False	NA	44	True	NA	NA	NA	131838237	131859357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.59	chr1	+	983	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-34	1186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	581.39413386178	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGTTTGGGCTGTGGCT	9248	False	NA	12	True	ATTAAA	-22	NA	131838237	131858995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857494_131858771
ES.1290.6	chr1	+	4954	12	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.2315808103182	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5195	False	NA	21	True	AATAAA	-18	NA	131755707	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757748_131758729_131761100_131761353_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.60	chr1	+	2221	1	Genic_Genomic	ENSMUSG00000026434.13	novel	NA	NA	NA	NA	-34	-17351	mono-exon	FALSE	NA	NA	NA	NA	NA	936	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	9248	False	NA	NA	False	NA	NA	NA	131838237	131840458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_131838200_131840500
ES.1290.62	chr1	+	4527	6	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	635.800912235898	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGTGTGCTTCGTGTG	9250	False	NA	24	True	TATAAA	-15	NA	131838239	131864056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131860143
ES.1290.64	chr1	+	2120	7	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-29	-333	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	578.747786172872	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGATATAAAAGATTGAGA	9253	False	NA	NA	False	AATAAA	-20	NA	131838242	131860084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857304_131857501_131858771
ES.1290.67	chr1	+	1808	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-50	4240	-28	-598	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTGTCTTGATAACG	9254	False	NA	NA	False	NA	NA	NA	131838243	131859819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.68	chr1	+	3125	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-50	2923	-28	719	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTAAAAGGTGTGTC	9254	False	NA	NA	False	NA	NA	NA	131838243	131861136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.7	chr1	+	2815	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	-7	1889	-7	347	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGCAATTCCACGGTG	5195	False	NA	NA	False	AGTAAA	-22	NA	131755707	131774714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.70	chr1	+	5932	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	570.573882644093	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9254	False	NA	27	True	TATAAA	-18	NA	131838243	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838373_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.73	chr1	+	671	6	ISM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-47	6645	-25	-395	5prime_fragment	FALSE	canonical	3	1163	junction_5	193.114059560665	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAACAAAAAGA	9257	False	NA	-12	True	NA	NA	NA	131838246	131857414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350
ES.1290.75	chr1	+	6084	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	578.747786172872	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9264	False	NA	27	True	TATAAA	-18	NA	131838253	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857304_131857501_131858771
ES.1290.76	chr1	+	2135	8	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	-18	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.194250764455	1127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGATTGAGATTTATC	9264	False	NA	NA	False	AATAAA	-26	NA	131838253	131860090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131843903_131843973_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
ES.1290.77	chr1	+	966	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	-37	5069	-15	1181	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACACGGTTTGGGCTG	9267	False	NA	7	True	ATTAAA	-17	NA	131838256	131858990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.79	chr1	+	4438	3	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	756.5	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9279	False	NA	27	True	TATAAA	-18	NA	131838268	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846778_131859876
ES.1290.8	chr1	+	4639	11	NNC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	45.2779195635135	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTATCCCTGTGTGT	5228	False	NA	21	True	AATAAA	-18	NA	131755740	131776601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131756132_131757778_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.83	chr1	+	5860	8	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	539.015201784794	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGTGTGCTTCGTGTG	9288	False	NA	24	True	TATAAA	-15	NA	131838277	131864056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771_131863513_131863663
ES.1290.84	chr1	+	6006	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	538.917871500122	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9288	False	NA	27	True	TATAAA	-18	NA	131838277	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852372_131855801_131855955_131857350_131857501_131858771
ES.1290.86	chr1	+	6979	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	35	-4639	13	997	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGCTTGTTTTGTTT	9317	False	NA	NA	False	NA	NA	NA	131838306	131865056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
ES.1290.87	chr1	+	5965	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	580.925124263016	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGTGTGCTTCGTGTG	9317	False	NA	24	True	TATAAA	-15	NA	131838306	131864056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855951_131857363_131857501_131858771
ES.1290.88	chr1	+	5855	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	186	-1	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	564.58561500154	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGCTTCGTGTGCT	9490	False	NA	26	True	TATAAA	-17	NA	131838479	131864058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838533_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.89	chr1	+	771	7	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	207	1186	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	564.58561500154	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGTTTGGGCTGTGGCT	9511	False	NA	12	True	ATTAAA	-22	NA	131838500	131858995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131838533_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ES.1290.9	chr1	+	4552	10	NIC	ENSMUSG00000013275.10	novel	4697	11	NA	NA	31	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.4670360373551	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGCTTGTATCCCTGT	5233	False	NA	17	True	AATAAA	-14	NA	131755745	131776597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131756132_131757748_131758729_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ES.1290.90	chr1	+	292	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	943	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAGAAATCTCC	2776	False	NA	NA	False	NA	NA	NA	131841578	131841870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131841600_131841900
ES.1290.91	chr1	+	4852	2	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	9080	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	632	False	NA	27	True	TATAAA	-18	NA	131847373	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131847406_131859239
ES.1290.92	chr1	+	5302	2	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	544	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9874	False	NA	27	True	TATAAA	-18	NA	131857444	131864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131857469_131858781
ES.1290.93	chr1	+	1318	1	NIC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	1868	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	1113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATAAAAGATTGAGATT	NA	False	NA	NA	False	AATAAA	-22	NA	131858768	131860086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131858800_131860100
ES.1290.94	chr1	+	339	2	NNC	ENSMUSG00000026434.13	novel	2375	7	NA	NA	2124	6884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCCTGAAAACT	NA	False	NA	NA	False	NA	NA	NA	131859024	131870943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131859335_131870914
ES.12900.1	chr15	-	155	1	Intergenic	novelGene_10746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAATCTAAA	5951	False	NA	NA	False	NA	NA	NA	102198331	102198176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102198200_102198300
ES.12901.1	chr15	-	3725	2	Genic_Genomic	ENSMUSG00000116091.2	novel	715	1	NA	NA	-2048	2296	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCTGGAGATGGCTCA	9150	False	NA	NA	False	NA	NA	NA	102206634	102201575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_102205283_102206616
ES.12902.1	chr15	-	206	1	Intergenic	novelGene_10747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCAGCCTTTTGGTT	4836	False	NA	NA	False	NA	NA	NA	102219662	102219456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102219500_102219700
ES.12903.1	chr15	+	202	1	Intergenic	novelGene_10748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTTAAAAAAAAAAAAAAAAG	8636	False	NA	NA	False	NA	NA	NA	102233351	102233553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102233400_102233600
ES.12904.1	chr15	+	704	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	-5	363	-5	24	multi-exon	FALSE	canonical	3	835	junction_1	29.5932424718887	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACAAGGGCCTGGTGCT	329	False	NA	50	True	AATAAA	-38	NA	102234545	102239945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ES.12904.11	chr15	+	3442	6	NIC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	490	junction_1	9.76524449258696	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATAGAAACCACCCTA	5952	False	NA	NA	False	NA	NA	NA	102240168	102246562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102240389_102240524_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.12	chr15	+	1230	8	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	227.465987589802	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGACCCAGTCCCTGAT	5967	False	NA	13	True	AATAAA	-14	NA	102240183	102246283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102240389_102240524_102240638_102242636_102242797_102243822_102243904_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.13	chr15	+	981	6	FSM	ENSMUSG00000001285.13	ENSMUST00000001331.13	981	6	15	-15	10	-2	multi-exon	FALSE	canonical	1	1	junction_3	200.273213386114	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGTCCCTGATC	5983	False	NA	14	True	AATAAA	-15	NA	102240199	102246284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245535_102245659_102245763_102245946_102246070
ES.12904.14	chr15	+	5191	6	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	62	-3	intron_retention	FALSE	canonical	0	0	junction_2	203.428218298249	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGACCCAGTCCCTGAT	6035	False	NA	13	True	AATAAA	-14	NA	102240251	102246283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102240389_102240524_102244639_102244997_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.15	chr15	+	1247	7	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	63	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.752650315556	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGACCCAGTCCCTGAT	6198	False	NA	13	True	AATAAA	-14	NA	102240414	102246283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102240638_102240960_102241154_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.2	chr15	+	4929	4	ISM	ENSMUSG00000001285.13_ENSMUSG00000001289.13	ENSMUST00000168805.8	827	5	-22	-1625	-2	437	intron_retention	FALSE	canonical	3	835	junction_1	38.0555150040335	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATTTTTGTCAGGTG	364	False	NA	NA	False	NA	NA	NA	102234580	102241468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102234696_102234867_102235285_102236956_102237032_102237146
ES.12904.3	chr15	+	2539	12	NIC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	-5529	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	267.582936861029	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGTCCCTGATC	398	False	NA	14	True	AATAAA	-15	NA	102234614	102246284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707_102240389_102240524_102241154_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.4	chr15	+	894	5	FSM	ENSMUSG00000001289.13	ENSMUST00000168805.8	827	5	12	-79	-9	1	multi-exon	FALSE	canonical	3	835	junction_1	33.0709464636257	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGGTGGTCTATTCTT	398	False	NA	27	True	AATAAA	-15	NA	102234614	102239922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102234696_102234867_102235285_102236956_102237032_102237146_102237253_102239707
ES.12904.5	chr15	+	606	5	FSM	ENSMUSG00000001289.13	ENSMUST00000001335.7	570	5	-9	-27	-9	27	multi-exon	FALSE	canonical	3	11	junction_2	370.883741892254	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGGCCTGGTGCTGAA	398	False	NA	53	True	AATAAA	-41	NA	102234614	102239948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102234696_102234867_102234971_102236956_102237032_102237146_102237253_102239707
ES.12904.6	chr15	+	1404	2	FSM	ENSMUSG00000001285.13	ENSMUST00000170281.2	741	2	-226	-437	-215	437	multi-exon	FALSE	canonical	3	490	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATTTTTGTCAGGTG	5712	False	NA	NA	False	NA	NA	NA	102239928	102241468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102240389_102240524
ES.12904.7	chr15	+	1198	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	-3	285	-3	3	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCCCTGATCCACCA	5924	False	NA	19	True	AATAAA	-20	NA	102240140	102246289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.8	chr15	+	1168	7	NNC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	189.232367445131	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGTCCCTGATC	5926	False	NA	14	True	AATAAA	-15	NA	102240142	102246284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102240389_102240524_102240595_102242616_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12904.9	chr15	+	3179	6	NIC	ENSMUSG00000001285.13	novel	1480	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	490	junction_1	9.76524449258696	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGTCCCTGATC	5937	False	NA	14	True	AATAAA	-15	NA	102240153	102246284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102240389_102240524_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ES.12905.1	chr15	+	173	1	Intergenic	novelGene_10750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGATATCAGTA	NA	False	NA	NA	False	NA	NA	NA	102257082	102257255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102257100_102257300
ES.12906.1	chr15	-	3592	2	Antisense	novelGene_ENSMUSG00000001285.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	6916	False	NA	NA	False	NA	NA	NA	102242174	102236127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102237252_102239706
ES.12906.10	chr15	-	1645	17	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	126.003906189451	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGATGTAACTCCGAG	NA	False	NA	-7	True	AATAAA	-23	NA	102259105	102246688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246817_102246891_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.11	chr15	-	6997	11	NNC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	49	1	intron_retention	FALSE	non_canonical	0	0	junction_9	156.87332469225	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGGATGTAACTCCGA	NA	False	NA	-8	True	AATAAA	-22	NA	102259073	102246689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102255205_102255470_102257895_102258102_102258516_102258930
ES.12906.12	chr15	-	4683	15	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_13	133.923466569378	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGGATGTAACTCCGA	NA	False	NA	-8	True	AATAAA	-22	NA	102259129	102246689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102257895_102258102_102258516_102258930
ES.12906.13	chr15	-	4382	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	175.213723460489	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259122	102246690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102257891_102258097_102258516_102258937
ES.12906.14	chr15	-	4942	8	NIC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	59	0	intron_retention	FALSE	canonical	3	447	junction_2	23.8413121129125	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259063	102246690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.16	chr15	-	2696	14	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	447	junction_7	37.4703038236822	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259129	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.17	chr15	-	6776	11	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	29	0	intron_retention	FALSE	canonical	3	13	junction_10	152.3905836986	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259093	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102252668_102254011_102255205_102255470_102255527_102258387_102258516_102259000
ES.12906.19	chr15	-	3480	14	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	13	0	intron_retention	FALSE	canonical	3	447	junction_7	35.6949601136462	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259109	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.2	chr15	-	1781	17	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	-10	8881	intron_retention	FALSE	non_canonical	0	0	junction_1	126.003906189451	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAAAAAAAAGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	102259140	102237805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102237837_102246693_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.20	chr15	-	1528	13	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	11	0	intron_retention	FALSE	canonical	1	2	junction_11	144.31300376458	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259111	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102258387_102258516_102258930
ES.12906.21	chr15	-	3292	10	NNC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	2362	0	intron_retention	FALSE	canonical	0	0	junction_5	165.359839571795	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	1319	False	NA	-10	True	AATAAA	-20	NA	102256153	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247975_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011
ES.12906.22	chr15	-	2588	12	NIC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	31	0	intron_retention	FALSE	canonical	3	447	junction_4	36.0763652857574	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259091	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.23	chr15	-	4657	15	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	447	junction_7	35.5450992632269	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259184	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102258516_102258930
ES.12906.24	chr15	-	2486	15	FSM	ENSMUSG00000036678.9	ENSMUST00000230812.2	2230	15	-261	5	7	0	multi-exon	FALSE	canonical	2	3	junction_11	133.897082012375	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259174	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254396_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.25	chr15	-	3650	7	NIC	ENSMUSG00000036678.9	novel	898	11	NA	NA	2404	0	intron_retention	FALSE	canonical	3	447	junction_2	25.8327956933301	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	1361	False	NA	-10	True	AATAAA	-20	NA	102256111	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102255205_102255470
ES.12906.27	chr15	-	2447	14	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	447	junction_6	35.5798959256887	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259133	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.3	chr15	-	2161	1	Antisense	novelGene_ENSMUSG00000001285.13_AS_novelGene_ENSMUSG00000001289.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTCTGTAGACCAGT	7553	False	NA	NA	False	NA	NA	NA	102241537	102239376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102239400_102241500
ES.12906.30	chr15	-	3016	14	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	15	0	intron_retention	FALSE	non_canonical	0	0	junction_12	138.727522301045	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259107	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102254111_102254921_102254969_102255112_102255205_102258378_102258516_102258930
ES.12906.31	chr15	-	2657	13	NNC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_12	141.028956837476	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259121	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102259000
ES.12906.32	chr15	-	1562	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	-324	0	intron_retention	FALSE	canonical	0	0	junction_15	130.099346654778	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259530	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102259510
ES.12906.33	chr15	-	3481	14	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	916	0	intron_retention	FALSE	canonical	2	12	junction_5	135.800410453319	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102257599	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247848_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470
ES.12906.34	chr15	-	1831	15	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	15	0	intron_retention	FALSE	canonical	3	447	junction_6	36.0662655428044	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259107	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.35	chr15	-	1075	6	NIC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	447	junction_5	31.225630498038	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	8975	False	NA	-10	True	AATAAA	-20	NA	102248497	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378
ES.12906.36	chr15	-	2430	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_11	175.079740562852	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259201	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254596_102254799_102254921_102254969_102255112_102255205_102255470_102255527_102258387
ES.12906.38	chr15	-	1792	15	FSM	ENSMUSG00000036678.9	ENSMUST00000229589.2	1814	15	21	1	13	0	multi-exon	FALSE	canonical	3	447	junction_6	35.0069963852709	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	False	NA	-10	True	AATAAA	-20	NA	102259109	102246691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.39	chr15	-	1846	15	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	447	junction_6	35.8528739633041	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259145	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.4	chr15	-	177	1	Intergenic	novelGene_10749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATATCGA	8912	False	NA	NA	False	NA	NA	NA	102243708	102243531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102243500_102243700
ES.12906.41	chr15	-	3716	12	NNC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	87	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	151.27600520924	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102258613	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102255907_102257910
ES.12906.42	chr15	-	2344	15	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_10	208.89144969362	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259130	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252660_102254011_102254111_102254596_102254799_102254921_102255527_102258387_102258516_102258930
ES.12906.44	chr15	-	1340	3	ISM	ENSMUSG00000036678.9	ENSMUST00000230406.2	697	7	176	3	176	-2	intron_retention	FALSE	canonical	3	528	junction_2	31.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	9213	False	NA	-12	True	AATAAA	-18	NA	102248259	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_102246941_102247075_102247161_102247251
ES.12906.45	chr15	-	3213	9	NIC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	3865	-2	intron_retention	FALSE	canonical	3	447	junction_6	42.0498216405254	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	2822	False	NA	-12	True	AATAAA	-18	NA	102254650	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523
ES.12906.46	chr15	-	4528	8	NNC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	15	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	181.209316334814	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259107	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102248260_102248378_102248504_102248765_102248887_102252523_102254969_102255112_102255205_102258378_102258516_102258930
ES.12906.47	chr15	-	3423	12	NIC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	447	junction_7	38.1800865408195	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTACCAGGATGTAACT	NA	False	NA	-12	True	AATAAA	-18	NA	102259177	102246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102255527_102258387
ES.12906.48	chr15	-	8047	7	NIC	ENSMUSG00000036678.9	novel	2230	15	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	447	junction_4	43.764521399569	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCATTTACCAGGATGTA	NA	False	NA	-15	True	AATAAA	-15	NA	102259133	102246696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102248057_102248198_102248260_102248378_102248887_102252523_102255205_102255470
ES.12906.49	chr15	-	1026	2	FSM	ENSMUSG00000036678.9	ENSMUST00000230349.2	473	2	-76	-477	-4	477	multi-exon	FALSE	canonical	3	458	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102259198	102257757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102258516_102258930
ES.12906.5	chr15	-	1286	13	NIC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	3029	0	intron_retention	FALSE	canonical	1	1	junction_12	144.623721544335	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGATGTAACTCCGAGT	1986	False	NA	-6	True	AATAAA	-24	NA	102255486	102246687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255470
ES.12906.50	chr15	-	753	3	NNC	ENSMUSG00000036678.9	novel	473	2	NA	NA	-3	477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102259133	102257757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102257895_102258102_102258516_102258930
ES.12906.6	chr15	-	1844	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	-34	1	-22	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGATGTAACTCCGAGT	NA	False	NA	-6	True	AATAAA	-24	NA	102259228	102246687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ES.12906.7	chr15	-	4790	4	NNC	ENSMUSG00000036678.9	novel	440	6	NA	NA	-3391	0	intron_retention	FALSE	non_canonical	0	0	junction_3	223.709633230221	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGATGTAACTCCGAGT	5618	False	NA	-6	True	AATAAA	-24	NA	102251854	102246687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102248057_102248198_102248260_102248378_102250411_102250526
ES.12906.8	chr15	-	1727	15	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	22	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	134.442101186453	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGATGTAACTCCGAG	NA	False	NA	-7	True	AATAAA	-23	NA	102259159	102246688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102258378_102258516_102258930
ES.12906.9	chr15	-	5574	3	ISM	ENSMUSG00000036678.9	ENSMUST00000230481.2	898	11	5992	-1272	-4060	-1	intron_retention	FALSE	canonical	3	447	junction_2	25.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGGATGTAACTCCGAG	4949	False	NA	-7	True	AATAAA	-23	NA	102252523	102246688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_102248057_102248198_102248260_102248378
ES.12907.1	chr15	-	3562	3	NNC	ENSMUSG00000060284.8	novel	2873	2	NA	NA	-4151	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTGGTGAGAAAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	102279768	102265040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102267838_102275152_102275437_102279287
ES.12907.2	chr15	-	3102	3	NNC	ENSMUSG00000060284.8	novel	3097	2	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCTGGTGAGAAAGGA	3938	False	NA	NA	False	AATAAA	-19	NA	102275429	102265040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102267838_102274648_102274677_102275152
ES.12907.4	chr15	-	161	1	Intergenic	novelGene_10751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAATAAATCTTT	9468	False	NA	NA	False	NA	NA	NA	102269899	102269738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102269700_102269900
ES.12908.1	chr15	+	155	1	Intergenic	novelGene_10752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	672	False	NA	NA	False	NA	NA	NA	102281188	102281343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102281200_102281300
ES.12909.1	chr15	-	186	1	Intergenic	novelGene_10753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATGTCTCTAATGAAG	NA	False	NA	NA	False	NA	NA	NA	102288331	102288145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102288100_102288300
ES.1291.1	chr1	-	4657	1	Antisense	novelGene_ENSMUSG00000013275.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAACCAAAACCAAGCA	4566	False	NA	NA	False	NA	NA	NA	131755594	131750937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_131750900_131755600
ES.12910.1	chr15	-	172	1	Intergenic	novelGene_10754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAAAAACAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	102293914	102293742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102293700_102293900
ES.12911.1	chr15	-	175	1	Intergenic	novelGene_10755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	102296214	102296039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102296000_102296200
ES.12912.1	chr15	+	89	1	Intergenic	novelGene_10756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCTGGTGAGATGGCT	3315	False	NA	NA	False	NA	NA	NA	102299735	102299824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102299700_102299800
ES.12913.1	chr15	+	209	1	Intergenic	novelGene_10757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGAGACTGTCCCCAG	3408	False	NA	NA	False	NA	NA	NA	102299828	102300037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102299800_102300000
ES.12914.1	chr15	-	179	1	Intergenic	novelGene_10758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	102311205	102311026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102311000_102311200
ES.12915.1	chr15	-	1013	1	Intergenic	novelGene_10759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102313967	102312954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102313000_102314000
ES.12916.1	chr15	+	8215	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-447	-14	-210	14	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGTGTGTGTGGTAAC	NA	False	NA	44	True	AATAAA	-31	NA	102314367	102344853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.10	chr15	+	4278	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-78	268	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	48.7138583977907	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGTCCAGTATCTAGAA	NA	False	NA	10	True	AATAAA	-18	NA	102314689	102341382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102314858_102316206_102316368_102316794_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.11	chr15	+	4151	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-121	3724	-74	1	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTGCTATCTTGTCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	102314693	102341115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.12	chr15	+	6917	6	FSM	ENSMUSG00000001280.14	ENSMUST00000163709.8	3134	6	-71	-3712	-71	-13	multi-exon	FALSE	canonical	1	2	junction_2	51.6658494559027	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	17	True	AATAAA	-4	NA	102314696	102344826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102317592_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.13	chr15	+	3308	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-33	144	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	50.5553162387498	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAGAAACTAAATTGT	NA	False	NA	5	True	AATAAA	-15	NA	102314734	102341258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102314858_102316206_102316368_102317595_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.15	chr15	+	3067	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-65	4752	-18	-1027	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAGAGTAAGCATTCAT	NA	False	NA	NA	False	TATAAA	-16	NA	102314749	102340087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.17	chr15	+	5937	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-61	1878	-14	1847	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAGACTGAAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	102314753	102342961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.18	chr15	+	3903	5	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	43	5157	43	-1432	3prime_fragment	FALSE	canonical	3	108	junction_1	17.1828402774396	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGGTGCCACCCTTT	NA	False	NA	84	True	NA	NA	NA	102314857	102339682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.19	chr15	+	8740	5	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	350	13	-25	-13	3prime_fragment	FALSE	canonical	3	108	junction_1	17.1828402774396	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	17	True	AATAAA	-4	NA	102315164	102344826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.2	chr15	+	4327	6	NIC	ENSMUSG00000001280.14	novel	222	3	NA	NA	-33	267	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	51.3536756230749	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCCAGTATCTAGA	NA	False	NA	9	True	AATAAA	-17	NA	102314544	102341381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102314619_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.20	chr15	+	2843	6	NIC	ENSMUSG00000001280.14	novel	652	3	NA	NA	-24	-1256	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.4999047618184	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAACAGATTCTATAT	NA	False	NA	NA	False	NA	NA	NA	102315165	102339858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102315279_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.21	chr15	+	7802	6	NIC	ENSMUSG00000001280.14	novel	652	3	NA	NA	-15	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.4999047618184	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGGTGTATTGAGAG	NA	False	NA	17	True	AATAAA	-4	NA	102315174	102344826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102315279_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.22	chr15	+	4729	6	NNC	ENSMUSG00000001280.14	novel	328	3	NA	NA	185	265	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.1175594209859	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAGGTCCAGTATCTA	NA	False	NA	7	True	AATAAA	-15	NA	102315374	102341379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102315853_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.23	chr15	+	3241	6	NIC	ENSMUSG00000001280.14	novel	328	3	NA	NA	219	-1187	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	51.3536756230749	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGCTGGGAGGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	102315408	102339927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102315851_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.24	chr15	+	4348	5	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	1465	3290	257	435	3prime_fragment	FALSE	canonical	3	108	junction_1	17.1828402774396	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGTGGATTCCTTATTC	861	False	NA	NA	False	AAGAAA	-38	NA	102316279	102341549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.25	chr15	+	7544	4	ISM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	1833	9	625	-9	3prime_fragment	FALSE	canonical	3	109	junction_2	16.0485374896143	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGTATTGAGAGTGTT	1229	False	NA	21	True	AATAAA	-8	NA	102316647	102344830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.26	chr15	+	3759	4	ISM	ENSMUSG00000001280.14	ENSMUST00000163709.8	3134	6	2959	-1010	1704	1010	3prime_fragment	FALSE	canonical	3	109	junction_2	16.0485374896143	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGATTCTTTCTGCTT	2308	False	NA	NA	False	NA	NA	NA	102317726	102342124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.27	chr15	+	5666	1	NIC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	23135	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTCTGGTGTATTGA	7182	False	NA	14	True	AATAAA	-1	NA	102339157	102344823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102339200_102344800
ES.12916.28	chr15	+	7145	1	Genic_Genomic	ENSMUSG00000001280.14	novel	NA	NA	NA	NA	25478	3806	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAGAAAAAAAA	9525	False	NA	NA	False	NA	NA	NA	102341500	102348645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102341500_102348600
ES.12916.3	chr15	+	4134	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	48.7138583977907	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTGCTATCTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	102314564	102341113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102314858_102316206_102316368_102316794_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.4	chr15	+	4325	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-144	3573	93	152	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAATTGTTTTTGTAT	NA	False	NA	13	True	AATAAA	-23	NA	102314670	102341266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.5	chr15	+	7733	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-90	-14	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	48.7138583977907	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCTGGTGTATTGAGA	NA	False	NA	16	True	AATAAA	-3	NA	102314677	102344825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102314858_102316206_102316368_102316794_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.6	chr15	+	2915	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-134	4973	-87	-1248	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATTCTATATTATATATA	NA	False	NA	NA	False	NA	NA	NA	102314680	102339866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.7	chr15	+	4429	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	-133	3458	-86	267	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCCAGTATCTAGA	NA	False	NA	9	True	AATAAA	-17	NA	102314681	102341381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ES.12916.8	chr15	+	3482	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-84	267	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	50.5553162387498	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCCAGTATCTAGA	NA	False	NA	9	True	AATAAA	-17	NA	102314683	102341381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102314858_102316206_102316368_102317595_102318155_102334065_102334232_102338391_102338592_102339159
ES.12917.1	chr15	+	1929	11	NNC	ENSMUSG00000023047.12	novel	1938	11	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	59.9649897857075	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAATGTGTTTTTACTTC	NA	False	NA	21	True	AATAAA	-21	NA	102353809	102363073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102353958_102354239_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355674_102355897_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ES.12917.2	chr15	+	1351	5	ISM	ENSMUSG00000023047.12	ENSMUST00000023809.11	1938	11	6422	0	-370	0	3prime_fragment	FALSE	canonical	3	32	junction_1	46.916814683011	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTTCATCAATGTGTT	NA	False	NA	13	True	AATAAA	-13	NA	102360223	102363065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ES.12917.3	chr15	+	1072	6	NNC	ENSMUSG00000023047.12	novel	611	3	NA	NA	-238	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.019996722386	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAATGTGTTTTTACTTC	NA	False	NA	21	True	AATAAA	-21	NA	102360355	102363073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102360429_102360583_102360699_102360821_102360995_102361179_102361328_102361466_102361604_102362647
ES.12917.4	chr15	+	2660	1	Genic_Genomic	ENSMUSG00000023047.12	novel	NA	NA	NA	NA	-179	6	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTGTTTTTACTTCT	NA	False	NA	22	True	AATAAA	-22	NA	102360414	102363074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102360400_102363100
ES.12917.5	chr15	+	900	4	NIC	ENSMUSG00000023047.12	novel	1938	11	NA	NA	-92	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	64.0433880705538	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTTCATCAATGTGTT	NA	False	NA	13	True	AATAAA	-13	NA	102360501	102363065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102360699_102361179_102361328_102361466_102361604_102362647
ES.12917.6	chr15	+	1011	4	NIC	ENSMUSG00000023047.12	novel	1938	11	NA	NA	-68	0	intron_retention	FALSE	canonical	3	123	junction_2	13.3666251038423	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360689	102363068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102360995_102361179_102361328_102361466_102361604_102362647
ES.12917.7	chr15	+	723	3	NIC	ENSMUSG00000023047.12	novel	1938	11	NA	NA	69	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	69.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTTCATCAATGTGTT	NA	False	NA	13	True	AATAAA	-13	NA	102360826	102363065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102360995_102361466_102361604_102362647
ES.12917.8	chr15	+	2028	2	FSM	ENSMUSG00000023047.12	ENSMUST00000161376.2	364	2	101	-1765	101	3	multi-exon	FALSE	canonical	3	133	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAATGTGTTTTTACT	NA	False	NA	19	True	AATAAA	-19	NA	102360858	102363071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102360995_102361179
ES.12918.1	chr15	+	1944	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	-901	-23	7	-7	multi-exon	FALSE	canonical	3	623	junction_2	60	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	2385	False	NA	33	True	AATAAA	-36	NA	102367616	102371234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102368582_102368804_102369155_102370605
ES.12918.10	chr15	+	3403	22	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	1086	14	NA	NA	14	7	multi-exon	FALSE	non_canonical	0	0	junction_5	226.298500520592	525	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCTTTGTGAATAG	2419	False	NA	12	True	ATTAAA	-12	NA	102367650	102407323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605_102371128_102373473_102373583_102374124_102374279_102377087_102377149_102377238_102377832_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.11	chr15	+	3313	13	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	14	6	intron_retention	FALSE	non_canonical	0	0	junction_4	232.35370247869	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	2419	False	NA	11	True	ATTAAA	-11	NA	102367650	102407322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102367691_102368542_102368582_102368804_102369155_102381695_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392582_102392676_102395522_102395565_102396639_102398243_102399068_102399239_102406923
ES.12918.12	chr15	+	2230	18	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	14	49	multi-exon	FALSE	canonical	0	0	junction_5	212.321962869965	527	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGTGTTGTTCCTGTC	2419	False	NA	54	True	AATAGA	-22	NA	102367650	102407365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102367691_102368170_102368267_102368542_102368582_102368804_102369155_102370605_102370861_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.13	chr15	+	3444	17	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	10	5	intron_retention	FALSE	non_canonical	0	0	junction_9	193.786760625565	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAGTGTCTTTCATGG	2445	False	NA	NA	False	NA	NA	NA	102367676	102408501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368017_102368542_102368582_102368804_102369155_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.14	chr15	+	2900	15	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	2	45	intron_retention	FALSE	non_canonical	0	0	junction_8	205.82184687992	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	3288	False	NA	50	True	AATAGA	-18	NA	102368519	102407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368582_102368804_102369155_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102398243_102399068_102399239_102406923
ES.12918.15	chr15	+	4043	4	NNC	ENSMUSG00000023048.14	novel	1020	3	NA	NA	2	3764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	325.675025481264	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGAGTTTATGTGTAAT	3288	False	NA	NA	False	NA	NA	NA	102368519	102375005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102368582_102368804_102369155_102370605_102373514_102374282
ES.12918.16	chr15	+	2997	15	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	2	4	multi-exon	FALSE	canonical	2	4	junction_2	185.242105783491	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGAGTGTCTTTCATG	3288	False	NA	NA	False	NA	NA	NA	102368519	102408500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368582_102368804_102369155_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.17	chr15	+	1973	16	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	8	49	multi-exon	FALSE	canonical	3	11	junction_2	180.778120603376	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGTGTTGTTCCTGTC	3294	False	NA	54	True	AATAGA	-22	NA	102368525	102407365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368582_102368804_102369155_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.18	chr15	+	1832	15	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	34	27	multi-exon	FALSE	canonical	3	11	junction_2	184.33072540011	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATGCCACAGTGAC	3320	False	NA	32	True	ATTAAA	-32	NA	102368551	102407343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368582_102368804_102369155_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.19	chr15	+	2739	14	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	43	6	intron_retention	FALSE	canonical	3	11	junction_2	190.384071483295	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	3329	False	NA	11	True	ATTAAA	-11	NA	102368560	102407322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102368582_102368804_102369155_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102398243_102399068_102399239_102406923
ES.12918.2	chr15	+	1203	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	20	1	-7	-1	multi-exon	FALSE	canonical	3	129	junction_1	259.364969685576	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCTAGTTTTGTTACT	2398	False	NA	39	True	AATAAA	-42	NA	102367629	102371240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
ES.12918.20	chr15	+	3867	1	Genic_Genomic	ENSMUSG00000023048.14	novel	NA	NA	NA	NA	2623	3766	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGAGTTTATGTGTAATAC	5909	False	NA	NA	False	NA	NA	NA	102371140	102375007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102371100_102375000
ES.12918.22	chr15	+	1706	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	0	7	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	171.496855940956	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCTTTGTGAATAG	2009	False	NA	12	True	ATTAAA	-12	NA	102378973	102407323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.25	chr15	+	582	5	FSM	ENSMUSG00000056851.15	ENSMUST00000229275.2	516	5	-63	-3	-18	3	multi-exon	FALSE	canonical	3	59	junction_1	63.021325755652	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATATACCCTCAGTTGA	2084	False	NA	15	True	AATAAA	-28	NA	102379048	102383202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009
ES.12918.26	chr15	+	1732	15	NNC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-5	45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	181.733657997025	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	2118	False	NA	50	True	AATAGA	-18	NA	102379082	102407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383128_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.27	chr15	+	1574	14	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	20	54	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	169.151939682124	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTTCCTGTCTGATG	2167	False	NA	59	True	AATAGA	-27	NA	102379131	102407370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.28	chr15	+	1523	14	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-20	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	158.695719415953	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	2207	False	NA	-15	True	AATACA	-35	NA	102379171	102407296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.29	chr15	+	1608	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-19	27	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	148.572184064013	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATGCCACAGTGAC	2208	False	NA	32	True	ATTAAA	-32	NA	102379172	102407343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.3	chr15	+	2141	2	NIC	ENSMUSG00000023048.14	novel	1020	3	NA	NA	3	-10	intron_retention	FALSE	canonical	3	623	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTTGACTGGGCTAGT	2408	False	NA	30	True	AATAAA	-33	NA	102367639	102371231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102369155_102370605
ES.12918.30	chr15	+	2765	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-5	3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	164.508730616279	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAGAGTGTCTTTCAT	2222	False	NA	NA	False	NA	NA	NA	102379186	102408499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.31	chr15	+	1468	13	NIC	ENSMUSG00000056851.15	novel	1215	14	NA	NA	-5	45	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	187.363932109559	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	2249	False	NA	50	True	AATAGA	-18	NA	102379213	102407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ES.12918.32	chr15	+	1231	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-5	47	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	152.427342280039	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTTCAGCAGTTACG	2249	False	NA	13	True	ATTAAA	-15	NA	102379213	102407124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.33	chr15	+	1819	15	NNC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-5	3647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	153.068895386012	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTTCTTTTTTTTTTA	2249	False	NA	NA	False	AATAAA	-13	NA	102379213	102402776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102402095
ES.12918.34	chr15	+	2053	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	230	669	-4	511	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATGTATTATACCACT	2250	False	NA	NA	False	GATAAA	-18	NA	102379214	102407827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.35	chr15	+	1563	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	-4	45	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	145.271894974175	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	2250	False	NA	50	True	AATAGA	-18	NA	102379214	102407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.36	chr15	+	1495	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	-4	49	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	151.135778916308	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGTGTTGTTCCTGTC	2250	False	NA	54	True	AATAGA	-22	NA	102379214	102407365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.37	chr15	+	1424	14	NIC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	152.427342280039	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCTTTGTGAATAG	2255	False	NA	12	True	ATTAAA	-12	NA	102379219	102407323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.38	chr15	+	1550	15	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	2	27	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	165.568162176581	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATGCCACAGTGAC	2257	False	NA	32	True	ATTAAA	-32	NA	102379221	102407343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102379239_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.41	chr15	+	3691	12	NIC	ENSMUSG00000056851.15	novel	3222	14	NA	NA	-234	-20	intron_retention	FALSE	canonical	3	186	junction_2	138.523679987775	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	3973	False	NA	-15	True	AATACA	-35	NA	102380937	102407296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102398243_102399068_102399239_102406923
ES.12918.42	chr15	+	1529	14	FSM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	520	1173	-13	7	multi-exon	FALSE	canonical	3	186	junction_2	129.880737282939	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCTTTGTGAATAG	4727	False	NA	12	True	ATTAAA	-12	NA	102381691	102407323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.43	chr15	+	1327	14	FSM	ENSMUSG00000056851.15	ENSMUST00000230114.2	1086	14	-76	-165	-12	48	multi-exon	FALSE	canonical	3	171	junction_11	136.533456029592	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTCAGCAGTTACGC	4728	False	NA	14	True	ATTAAA	-16	NA	102381692	102407125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.44	chr15	+	1376	13	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	19	-20	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_6	174.808148805738	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	4823	False	NA	-15	True	AATACA	-35	NA	102381787	102407296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102398189_102398243_102399068_102399239_102406923
ES.12918.45	chr15	+	1449	13	NNC	ENSMUSG00000056851.15	novel	3222	14	NA	NA	23	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.137928950741	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGAAACTGGATGCC	4827	False	NA	24	True	ATTAAA	-24	NA	102381791	102407335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102381862_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392587_102392676_102394387_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.46	chr15	+	1291	12	ISM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	3476	-6	-16	6	3prime_fragment	FALSE	canonical	3	186	junction_1	128.521921466809	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTCTTTGTGAATA	5599	False	NA	11	True	ATTAAA	-11	NA	102382563	102407322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.47	chr15	+	1299	11	ISM	ENSMUSG00000056851.15	ENSMUST00000229918.2	1463	15	3006	-266	-2	26	3prime_fragment	FALSE	non_canonical	0	0	junction_4	162.1909060336	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGGATGCCACAGTGA	5715	False	NA	31	True	ATTAAA	-31	NA	102382679	102407342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.48	chr15	+	1273	10	ISM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	3920	-45	-43	45	3prime_fragment	FALSE	canonical	3	231	junction_3	119.145102944081	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACGTGGGTGTTGTTCC	6043	False	NA	50	True	AATAGA	-18	NA	102383007	102407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.49	chr15	+	1238	10	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	20	22	combination_of_known_junctions	FALSE	canonical	3	58	junction_7	160.348232156003	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAACTGGATGCCACA	6106	False	NA	27	True	ATTAAA	-27	NA	102383070	102407338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102398189_102398243_102399068_102399239_102406923
ES.12918.5	chr15	+	1061	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	11	-17	11	-7	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	2416	False	NA	33	True	AATAAA	-36	NA	102367647	102371234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ES.12918.50	chr15	+	1184	10	ISM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	5877	1200	-4	-20	3prime_fragment	FALSE	canonical	3	231	junction_2	123.970426580966	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	120	False	NA	-15	True	AATACA	-35	NA	102387048	102407296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.53	chr15	+	1556	9	NNC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	1	3758	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	166.489301458082	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCACTGTGTGATGTGA	125	False	NA	10	True	AATAAA	-20	NA	102387053	102402887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102398189_102398243_102399068_102399239_102402095
ES.12918.54	chr15	+	3013	8	NNC	ENSMUSG00000056851.15	novel	1576	14	NA	NA	28	-2480	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	179.915626483808	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGATGTTCAAG	171	False	NA	NA	False	AATAAA	-26	NA	102387099	102404480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102402095
ES.12918.56	chr15	+	1907	9	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	48	-308	combination_of_known_junctions	FALSE	canonical	3	171	junction_6	137.989073389888	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTACCTGCCCCTCC	191	False	NA	6	True	AATAAA	-17	NA	102387119	102408186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.57	chr15	+	2294	10	ISM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	5965	2	65	0	3prime_fragment	FALSE	canonical	3	231	junction_2	123.970426580966	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGGAATAAGAGTGTCT	208	False	NA	NA	False	NA	NA	NA	102387136	102408494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.58	chr15	+	956	8	NIC	ENSMUSG00000056851.15	novel	1086	14	NA	NA	-40	-20	combination_of_known_junctions	FALSE	canonical	3	171	junction_5	146.782499095827	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	435	False	NA	-15	True	AATACA	-35	NA	102391592	102407296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398189_102398243_102399068_102399239_102406923
ES.12918.59	chr15	+	1913	9	ISM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	10450	310	-11	-308	3prime_fragment	FALSE	canonical	3	231	junction_1	130.716056779571	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTACCTGCCCCTCC	464	False	NA	6	True	AATAAA	-17	NA	102391621	102408186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ES.12918.6	chr15	+	2532	17	Fusion	ENSMUSG00000056851.15_ENSMUSG00000023048.14	novel	3222	14	NA	NA	12	51	multi-exon	FALSE	non_canonical	0	0	junction_4	233.100023796116	527	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTTGTTCCTGTCTG	2417	False	NA	56	True	AATAGA	-24	NA	102367648	102407367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605_102371128_102374124_102374279_102381719_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392588_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ES.12918.62	chr15	+	2037	7	ISM	ENSMUSG00000056851.15	ENSMUST00000231085.2	915	9	5573	-1418	56	1	3prime_fragment	FALSE	canonical	3	22	junction_4	196.822819363564	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGAATAAGAGTGTCTT	1487	False	NA	NA	False	NA	NA	NA	102392644	102408495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ES.12918.63	chr15	+	3450	3	NNC	ENSMUSG00000056851.15	novel	585	3	NA	NA	-145	-2017	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	224	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTCCCACTGGTCTC	3710	False	NA	NA	False	ATTAAA	-21	NA	102397810	102404943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102398243_102399068_102399239_102402095
ES.12918.64	chr15	+	3042	1	Intergenic	novelGene_10771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTCTTTCCCACTGGT	531	False	NA	NA	False	ATTAAA	-18	NA	102401898	102404940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102401900_102404900
ES.12918.65	chr15	+	3516	1	NIC	ENSMUSG00000056851.15	novel	2952	15	NA	NA	5892	47	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTGGGTGTTGTTCCTG	1436	False	NA	52	True	AATAGA	-20	NA	102403847	102407363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102403800_102407400
ES.12918.7	chr15	+	2751	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	14	-1710	14	1686	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATACAGTATACTAGTA	2419	False	NA	NA	False	NA	NA	NA	102367650	102372927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ES.12918.8	chr15	+	3345	2	ISM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	-867	-7	14	1	intron_retention	FALSE	canonical	3	743	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCTGTGCCATTACCT	2419	False	NA	17	True	AATAAA	-20	NA	102367650	102371218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102368582_102368804
ES.12918.9	chr15	+	1634	4	NNC	ENSMUSG00000023048.14	novel	1353	4	NA	NA	14	-7	intron_retention	FALSE	canonical	2	34	junction_1	309.839026305955	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	2419	False	NA	33	True	AATAAA	-36	NA	102367650	102371234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102368267_102368542_102368582_102368804_102369155_102370605
ES.12919.1	chr15	+	4876	1	Antisense	novelGene_ENSMUSG00000023050.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAACCAAAAAAAAAA	7773	False	NA	NA	False	NA	NA	NA	102417038	102421914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_102417000_102421900
ES.1292.1	chr1	-	4397	10	Antisense	novelGene_ENSMUSG00000013275.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGGTTTTGCAGGTA	NA	False	NA	NA	False	NA	NA	NA	131775673	131756705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_131758736_131766855_131766961_131767914_131767991_131768596_131768734_131768862_131769012_131769720_131769869_131770684_131770766_131771655_131771791_131772074_131772219_131774281
ES.12920.1	chr15	+	2817	6	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-27	0	intron_retention	TRUE	canonical	3	365	junction_3	16.2849623886578	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426599	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102427727_102428909_102429649_102430158_102430232_102430415_102430987_102431283
ES.12920.11	chr15	+	1643	7	NNC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_3	174.664440189372	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426853	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430107_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.13	chr15	+	1435	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCCTTGTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	102426874	102432107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.14	chr15	+	1671	8	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-16	2	4	0	intron_retention	FALSE	canonical	3	312	junction_3	28	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426877	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.15	chr15	+	1416	8	NIC	ENSMUSG00000023051.12	novel	951	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	130.571741168741	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426878	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102427727_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.16	chr15	+	3716	5	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	365	junction_2	17.4982141945971	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426883	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102429649_102430158_102430232_102430415_102430987_102431283
ES.12920.17	chr15	+	2717	6	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	367	junction_1	15.0066651858433	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426884	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102427727_102428909_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.18	chr15	+	1692	8	NNC	ENSMUSG00000023051.12	novel	951	9	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	166.798301758105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426885	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427084_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.2	chr15	+	1808	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	-287	2	-20	0	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426606	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.20	chr15	+	2020	6	NNC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	184.014782014924	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426890	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427038_102427601_102427727_102429555_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.21	chr15	+	1511	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427145	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.22	chr15	+	1203	7	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	144.95631525854	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCCCTTGTTCTTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102427162	102432108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427280_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.23	chr15	+	1799	6	ISM	ENSMUSG00000023051.12	ENSMUST00000131184.8	1819	7	539	0	5	0	3prime_fragment	FALSE	canonical	3	28	junction_1	142.624822523991	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427165	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.24	chr15	+	1588	8	NNC	ENSMUSG00000023051.12	novel	782	8	NA	NA	21	0	intron_retention	FALSE	canonical	1	1	junction_6	169.994957908421	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427181	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430862_102430987_102431283
ES.12920.25	chr15	+	2118	7	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	22	0	intron_retention	FALSE	canonical	3	98	junction_1	106.799526632326	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427182	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.26	chr15	+	1354	8	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	152.163177717414	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427182	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427280_102427556_102427727_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.28	chr15	+	1393	8	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_4	146.563491848609	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427190	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.29	chr15	+	1814	8	NNC	ENSMUSG00000023051.12	novel	782	8	NA	NA	-24	0	intron_retention	FALSE	canonical	1	2	junction_3	153.431896745023	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427209	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429322_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.3	chr15	+	4175	5	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	365	junction_1	17.1245437895437	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCCTTGTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	102426616	102432107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.30	chr15	+	1581	8	FSM	ENSMUSG00000023051.12	ENSMUST00000142194.3	782	8	-27	-772	-24	0	multi-exon	FALSE	canonical	3	98	junction_1	99.7595067333107	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102427209	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.31	chr15	+	3807	4	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	77	0	intron_retention	FALSE	canonical	3	365	junction_1	19.131126469709	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427313	102432111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102429649_102430158_102430232_102430415_102430987_102431283
ES.12920.4	chr15	+	2473	7	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	365	junction_3	15.4209453522005	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426618	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427038_102427556_102427727_102428909_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.5	chr15	+	3309	5	NIC	ENSMUSG00000023051.12	novel	1819	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_2	16.9263108798108	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426626	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_102427727_102428909_102429649_102430158_102430232_102430415_102430987_102431283
ES.12920.6	chr15	+	1399	7	FSM	ENSMUSG00000023051.12	ENSMUST00000100168.10	1278	7	-49	-72	-49	0	multi-exon	FALSE	canonical	2	5	junction_1	143.475510879809	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426742	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102427038_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.7	chr15	+	1639	7	FSM	ENSMUSG00000023051.12	ENSMUST00000131184.8	1819	7	174	6	9	-6	multi-exon	FALSE	canonical	3	28	junction_2	131.824904913888	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAACCCCTTGTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	102426800	102432103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12920.8	chr15	+	1490	8	NNC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	176.456157473192	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426841	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102427038_102427561_102427727_102428914_102429013_102429555_102429649_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ES.12920.9	chr15	+	1689	8	ISM	ENSMUSG00000023051.12	ENSMUST00000154948.8	951	9	-149	-455	-19	0	intron_retention	FALSE	canonical	3	32	junction_3	122.898331965898	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	102426842	102432109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283
ES.12921.1	chr15	+	191	1	Intergenic	novelGene_10772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTTTTAATTGTA	NA	False	NA	NA	False	NA	NA	NA	102435623	102435814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102435600_102435800
ES.12922.1	chr15	+	200	1	Intergenic	novelGene_10773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCATATTATATCTTA	1536	False	NA	NA	False	NA	NA	NA	102448217	102448417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102448200_102448400
ES.12923.1	chr15	+	2224	1	Intergenic	novelGene_10778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	1773	False	NA	NA	False	NA	NA	NA	102489701	102491925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102489700_102491900
ES.12924.1	chr15	+	5434	1	Intergenic	novelGene_10780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATTTATTATTGTGT	3683	False	NA	NA	False	NA	NA	NA	102524538	102529972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102524500_102530000
ES.12925.1	chr15	-	135	1	Intergenic	novelGene_10760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102321190	102321055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102321100_102321200
ES.12926.1	chr15	-	369	2	Antisense	novelGene_ENSMUSG00000071586.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	102481265	102323600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102323791_102481086
ES.12926.10	chr15	-	3356	2	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTAACACTCATATT	7068	False	NA	NA	False	NA	NA	NA	102392623	102388402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391723_102392587
ES.12926.100	chr15	-	2570	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	22	-69	21	69	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGTCTCTTGACTTT	NA	False	NA	NA	False	NA	NA	NA	102533852	102441937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
ES.12926.101	chr15	-	2123	11	NIC	ENSMUSG00000099083.8	novel	7147	12	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	16.92217480113	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	102533899	102442011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102502106_102502176_102533796
ES.12926.102	chr15	-	2157	12	NNC	ENSMUSG00000099083.8	novel	2523	12	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.0761154213659	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	102533516	102442011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102442874_102446617_102446727_102449174_102449363_102454832_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
ES.12926.103	chr15	-	2251	12	NNC	ENSMUSG00000099083.8	novel	7147	12	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.9456722282228	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	102533926	102442011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465890_102466014_102471748_102471846_102502106_102502176_102533796
ES.12926.105	chr15	-	203	1	Intergenic	novelGene_10774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCAAAGACTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	102458967	102458764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102458800_102459000
ES.12926.106	chr15	-	159	2	Intergenic	novelGene_10775	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	106	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	4563	False	NA	NA	False	NA	NA	NA	102513283	102458807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102458887_102513203
ES.12926.107	chr15	-	198	1	Intergenic	novelGene_10776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGTCTATAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	102467889	102467691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102467700_102467900
ES.12926.108	chr15	-	2510	1	Intergenic	novelGene_10777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCTAGTTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	102479318	102476808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102476800_102479300
ES.12926.109	chr15	-	176	1	Intergenic	novelGene_10779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102497649	102497473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102497500_102497600
ES.12926.11	chr15	-	4221	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTAACACTCATATT	7068	False	NA	NA	False	NA	NA	NA	102392623	102388402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102388400_102392600
ES.12926.110	chr15	-	3602	1	NIC	ENSMUSG00000052414.10	novel	1611	13	NA	NA	30469	-67154	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACTAAGGGAATTCAGC	7786	False	NA	NA	False	NA	NA	NA	102503033	102499431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102499400_102503000
ES.12926.111	chr15	-	2874	2	ISM	ENSMUSG00000099083.8	ENSMUST00000185070.8	531	5	-45	39555	-27	2550	5prime_fragment	FALSE	canonical	3	22	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACTAAGGGAATTCAGC	NA	False	NA	NA	False	NA	NA	NA	102533926	102499431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_102502176_102533796
ES.12926.12	chr15	-	3338	2	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAAGTAACACTCA	7068	False	NA	NA	False	NA	NA	NA	102392623	102388406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391723_102392601
ES.12926.14	chr15	-	3863	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGGGGAGGGAGAACTA	7068	False	NA	NA	False	NA	NA	NA	102392623	102388760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102388800_102392600
ES.12926.15	chr15	-	2986	2	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGGGGAGGGAGAACTA	7068	False	NA	NA	False	NA	NA	NA	102392623	102388760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391722_102392598
ES.12926.16	chr15	-	3536	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGAGGGCATTTGCAT	7068	False	NA	NA	False	NA	NA	NA	102392623	102389087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102389100_102392600
ES.12926.17	chr15	-	2645	2	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7068	False	NA	NA	False	NA	NA	NA	102392623	102389113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391723_102392587
ES.12926.18	chr15	-	3147	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAATAGACAACCAAATA	7068	False	NA	NA	False	NA	NA	NA	102392623	102389476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102389500_102392600
ES.12926.19	chr15	-	2268	2	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATCAAAA	7068	False	NA	NA	False	NA	NA	NA	102392623	102389490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391723_102392587
ES.12926.2	chr15	-	175	1	Intergenic	novelGene_10761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAAAAGCAGCTGG	NA	False	NA	NA	False	NA	NA	NA	102325218	102325043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102325000_102325200
ES.12926.20	chr15	-	1488	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAACCAAAAAGAA	7068	False	NA	NA	False	NA	NA	NA	102392623	102391135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102391100_102392600
ES.12926.21	chr15	-	2334	1	Intergenic	novelGene_10769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1969	False	NA	NA	False	NA	NA	NA	102403726	102401392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102401400_102403700
ES.12926.22	chr15	-	2087	1	Intergenic	novelGene_10770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTCTAGCCCCCAA	1985	False	NA	NA	False	TTTAAA	-33	NA	102403710	102401623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102401600_102403700
ES.12926.23	chr15	-	5042	1	Genic_Genomic	ENSMUSG00000023050.10	novel	NA	NA	NA	NA	9580	1567	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCAAGCCCCTTGAAC	NA	False	NA	NA	False	NA	NA	NA	102409555	102404513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_102404500_102409600
ES.12926.24	chr15	-	6344	13	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	-4	2	intron_retention	FALSE	canonical	3	15	junction_9	18.5433051710494	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTCCTGTCTATGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	102419139	102406078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412319_102412549_102412742_102412904_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.25	chr15	-	10961	7	NIC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	39	-3	intron_retention	FALSE	canonical	3	46	junction_6	11.7992466802852	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTATTTGTCCTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	102419096	102406083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102417814_102418353
ES.12926.26	chr15	-	5422	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	23	-1127	23	-3	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTATTTGTCCTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	102419112	102406083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.27	chr15	-	6855	11	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	31	-242	intron_retention	FALSE	canonical	0	0	junction_2	24.5161171477051	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATTCAGTGTACATT	NA	False	NA	NA	False	AATACA	-16	NA	102419104	102406322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409033_102409130_102409205_102409286_102410161_102410268_102410407_102410500_102410860_102411071_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.28	chr15	-	3935	17	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3956950114479	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAAGTCCATTAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	102419119	102407460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409033_102409130_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.29	chr15	-	4047	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAAGTCCATTAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	102419133	102407460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.3	chr15	-	208	1	Intergenic	novelGene_10762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATACTTC	NA	False	NA	NA	False	NA	NA	NA	102328668	102328460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102328500_102328700
ES.12926.30	chr15	-	4029	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	32	257	32	-8	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGGAAGAAAGTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	102419103	102407467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.31	chr15	-	3699	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	2	-349	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGGAATTTGGACAA	NA	False	NA	69	True	AATACA	-26	NA	102419133	102407808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.32	chr15	-	3454	14	FSM	ENSMUSG00000023050.10	ENSMUST00000023812.10	5185	14	3	1728	3	-349	multi-exon	FALSE	canonical	0	0	junction_13	20.876361876704	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGGAATTTGGACAA	NA	False	NA	69	True	AATACA	-26	NA	102425268	102407808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102425222
ES.12926.33	chr15	-	3575	13	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	25	-351	intron_retention	FALSE	canonical	2	3	junction_12	20.8930809918818	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTGAGGAATTTGGAC	NA	False	NA	67	True	AATACA	-24	NA	102419110	102407810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
ES.12926.34	chr15	-	3570	17	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	42	-359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.0846776834765	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATTTTATCTGAGGA	NA	False	NA	59	True	AATACA	-16	NA	102419093	102407818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409033_102409130_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.35	chr15	-	4118	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	8	-360	intron_retention	FALSE	canonical	3	33	junction_12	14.1653860965844	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGATTTTATCTGAGG	NA	False	NA	58	True	AATACA	-15	NA	102419127	102407819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.36	chr15	-	4047	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	28	-361	intron_retention	FALSE	canonical	3	13	junction_14	22.3441764722315	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAAGATTTTATCTGAG	NA	False	NA	57	True	AATACA	-14	NA	102419107	102407820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
ES.12926.37	chr15	-	3509	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	2	-363	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	20.1934431915163	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTAAGATTTTATCTG	NA	False	NA	55	True	AATACA	-12	NA	102419133	102407822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
ES.12926.38	chr15	-	3347	13	NNC	ENSMUSG00000023050.10	novel	5185	14	NA	NA	0	-418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.8669561605578	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102425247	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410711_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102425222
ES.12926.39	chr15	-	3965	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	15	-418	intron_retention	FALSE	canonical	3	15	junction_12	19.2515511640549	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419120	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.4	chr15	-	132	1	Intergenic	novelGene_10763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	2421	False	NA	NA	False	NA	NA	NA	102348310	102348178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102348200_102348300
ES.12926.40	chr15	-	3762	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	6	-418	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419129	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.41	chr15	-	4100	15	NNC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	-1615	-418	intron_retention	FALSE	canonical	1	2	junction_14	21.2852348939305	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102427114	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102426707
ES.12926.42	chr15	-	3713	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	79	418	-10	-418	multi-exon	FALSE	canonical	2	4	junction_15	20.3004105048806	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102425420	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
ES.12926.43	chr15	-	3758	16	NNC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	-1626	-418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	21.0392226303371	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102427125	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102426882
ES.12926.44	chr15	-	3630	16	NNC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	76	-418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	21.0392226303371	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419059	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102418944
ES.12926.45	chr15	-	3874	13	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	18	-418	intron_retention	FALSE	canonical	2	3	junction_12	20.7377808734579	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419117	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102419018
ES.12926.46	chr15	-	3771	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	39	-418	intron_retention	FALSE	canonical	3	33	junction_12	14.4901444338656	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419096	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.47	chr15	-	4258	14	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	9	-418	intron_retention	FALSE	canonical	0	0	junction_6	25.3904422216908	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419126	102407877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411069_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.48	chr15	-	4567	12	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	42	-420	intron_retention	FALSE	canonical	0	0	junction_5	23.9234315789436	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419093	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410860_102411069_102411181_102411923_102412083_102412159_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.49	chr15	-	3931	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	32	-420	intron_retention	FALSE	canonical	3	13	junction_14	22.1924912226335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419103	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
ES.12926.5	chr15	-	148	1	Intergenic	novelGene_10764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	102352344	102352196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102352200_102352300
ES.12926.50	chr15	-	3603	15	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	29	-420	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	23.7801366261673	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419106	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410711_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.51	chr15	-	3649	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	0	669	0	-420	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419135	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.52	chr15	-	4372	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	8	-420	intron_retention	FALSE	canonical	3	15	junction_11	19.7506135270244	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419127	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.53	chr15	-	3505	17	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	27	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3956950114479	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419108	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409033_102409130_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.54	chr15	-	3905	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	39	-420	intron_retention	FALSE	canonical	3	15	junction_12	19.1944436404566	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419096	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.55	chr15	-	4321	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	0	-420	intron_retention	FALSE	canonical	3	33	junction_11	14.6683251707074	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419227	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.56	chr15	-	3493	17	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	35	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.3956950114479	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419100	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102413603_102413704_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.57	chr15	-	3622	16	NIC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	-12	-420	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	20.667096769718	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102425451	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425342
ES.12926.58	chr15	-	4189	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	32	-420	intron_retention	FALSE	canonical	3	13	junction_14	22.2820306275907	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419103	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
ES.12926.59	chr15	-	3543	15	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	70	-420	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	20.8488241727862	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419065	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410711_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.6	chr15	-	213	1	Intergenic	novelGene_10765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGGAAGGAAGA	7713	False	NA	NA	False	NA	NA	NA	102359285	102359072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102359100_102359300
ES.12926.60	chr15	-	4007	15	NNC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	-13	-420	intron_retention	FALSE	canonical	1	1	junction_7	25.8434257222456	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102425284	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410856_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102425222
ES.12926.61	chr15	-	3913	17	NIC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	13	-420	combination_of_known_junctions	FALSE	canonical	2	4	junction_16	23.0050945444699	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102425486	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102425222
ES.12926.62	chr15	-	3724	15	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	29	-420	intron_retention	FALSE	canonical	0	0	junction_9	21.6851308033681	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419106	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412264_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.63	chr15	-	3108	16	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	30	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.952857137446	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419105	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102410027_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.64	chr15	-	3642	18	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	26	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.8813700076199	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419109	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409033_102409130_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.65	chr15	-	3770	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	15	-420	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	21.6347521363199	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCGAGGGTTTTCTTG	NA	False	NA	-2	True	AATATA	-19	NA	102419120	102407879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
ES.12926.66	chr15	-	4193	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	8	-421	intron_retention	FALSE	canonical	3	15	junction_12	19.1759108142366	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTCGAGGGTTTTCTT	NA	False	NA	-3	True	AATATA	-18	NA	102419127	102407880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.68	chr15	-	3503	17	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	44	-421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	25.0935748748559	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGTCGAGGGTTTTCTT	NA	False	NA	-3	True	AATATA	-18	NA	102419091	102407880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409654_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102413956_102416813_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.69	chr15	-	4002	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	35	-422	intron_retention	FALSE	canonical	3	33	junction_11	14.953577078934	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGTCGAGGGTTTTCT	NA	False	NA	-4	True	AATATA	-17	NA	102419100	102407881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.7	chr15	-	183	1	Intergenic	novelGene_10766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATCTGAGAAC	NA	False	NA	NA	False	NA	NA	NA	102374252	102374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102374100_102374300
ES.12926.70	chr15	-	3753	13	NIC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	-26	-425	intron_retention	FALSE	canonical	0	0	junction_12	21.6799638683586	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAACTGTCGAGGGTTT	NA	False	NA	-7	True	AATATA	-14	NA	102425465	102407884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102425222
ES.12926.71	chr15	-	4020	14	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	42	-426	intron_retention	FALSE	canonical	2	3	junction_6	24.6346078784592	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAACTGTCGAGGGTT	NA	False	NA	-8	True	AATATA	-13	NA	102419093	102407885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410711_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.72	chr15	-	3989	12	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	27	-426	intron_retention	FALSE	canonical	2	3	junction_11	21.4449130919354	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAACTGTCGAGGGTT	NA	False	NA	-8	True	AATATA	-13	NA	102419108	102407885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102419018
ES.12926.73	chr15	-	4154	14	NNC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-428	intron_retention	FALSE	canonical	1	1	junction_3	22.2000053307739	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCCCAACTGTCGAGGG	NA	False	NA	-10	True	AATATA	-11	NA	102419119	102407887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409654_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.74	chr15	-	5520	8	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	83	-986	intron_retention	FALSE	canonical	3	33	junction_7	14.6468635634015	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATGGGGCTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	102419052	102408445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102414004_102417724
ES.12926.75	chr15	-	7178	10	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	15	-986	intron_retention	FALSE	canonical	3	25	junction_7	17.5548523065896	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATGGGGCTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	102419120	102408445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410860_102411071_102411181_102411923_102412083_102412159_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.76	chr15	-	3032	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	30	-988	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATAGATGGGGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	102419105	102408447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.77	chr15	-	2878	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	8	-988	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	20.1934431915163	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATAGATGGGGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	102419127	102408447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
ES.12926.78	chr15	-	3639	12	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	28	-990	intron_retention	FALSE	canonical	0	0	junction_10	20.4329178589697	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATAGATGGGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	102419107	102408449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102418353_102418441_102419018
ES.12926.79	chr15	-	3747	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	19	-990	intron_retention	FALSE	canonical	3	33	junction_11	14.6683251707074	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATAGATGGGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	102419208	102408449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.8	chr15	-	178	1	Intergenic	novelGene_10767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	102376045	102375867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102375900_102376000
ES.12926.80	chr15	-	3203	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	31	-994	intron_retention	FALSE	canonical	3	33	junction_12	14.4901444338656	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACAGATAGATGGGGC	NA	False	NA	NA	False	NA	NA	NA	102419104	102408453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.81	chr15	-	3183	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	28	-994	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	21.6347521363199	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACAGATAGATGGGGC	NA	False	NA	NA	False	NA	NA	NA	102419107	102408453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
ES.12926.82	chr15	-	3189	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	2	-995	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAACAGATAGATGGGG	NA	False	NA	NA	False	NA	NA	NA	102419133	102408454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
ES.12926.83	chr15	-	3460	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	31	-995	intron_retention	FALSE	canonical	3	33	junction_12	14.1653860965844	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAACAGATAGATGGGG	NA	False	NA	NA	False	NA	NA	NA	102419104	102408454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.84	chr15	-	3204	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	11	995	11	-995	multi-exon	FALSE	canonical	2	4	junction_15	20.3004105048806	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAACAGATAGATGGGG	NA	False	NA	NA	False	NA	NA	NA	102425488	102408454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
ES.12926.85	chr15	-	3579	11	NIC	ENSMUSG00000023050.10	novel	4210	16	NA	NA	693	-996	intron_retention	FALSE	canonical	0	0	junction_7	24.749949494898	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAACAGATAGATGGG	NA	False	NA	NA	False	NA	NA	NA	102418442	102408455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410860_102411071_102411181_102412159_102412742_102412904_102414004_102417724_102417814_102418353
ES.12926.86	chr15	-	2971	14	NNC	ENSMUSG00000023050.10	novel	5185	14	NA	NA	-882	-997	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	20.876361876704	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATCAACAGATAGATGG	NA	False	NA	NA	False	NA	NA	NA	102426381	102408456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102426170
ES.12926.87	chr15	-	3089	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	-17	1246	-17	-997	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATCAACAGATAGATGG	NA	False	NA	NA	False	NA	NA	NA	102419152	102408456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ES.12926.88	chr15	-	3276	15	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	7	-998	intron_retention	FALSE	canonical	3	33	junction_12	14.4478301456782	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAATCAACAGATAGATG	NA	False	NA	NA	False	NA	NA	NA	102419128	102408457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
ES.12926.89	chr15	-	3173	12	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	16	-998	intron_retention	FALSE	canonical	2	3	junction_11	19.8669125652687	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAATCAACAGATAGATG	NA	False	NA	NA	False	NA	NA	NA	102419119	102408457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102408612_102408942_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412742_102412904_102413089_102413524_102414004_102419018
ES.12926.9	chr15	-	442	1	Intergenic	novelGene_10768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATCTTGAAAACACAGAA	NA	False	NA	NA	False	NA	NA	NA	102378406	102377964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102378000_102378400
ES.12926.90	chr15	-	9877	2	FSM	ENSMUSG00000023052.9_ENSMUSG00000099083.8	ENSMUST00000184659.2	995	2	-8877	-5	-4794	-2	multi-exon	FALSE	canonical	2	5	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTGTGTTTGGACAAG	NA	False	NA	NA	False	AATAAA	-21	NA	102442254	102432275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102432465_102432566
ES.12926.91	chr15	-	1463	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184906.8	1457	12	-9	3	6	-3	multi-exon	TRUE	canonical	0	0	junction_1	15.8291498025344	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGAAGATGTGGATAC	NA	False	NA	NA	False	AATAAA	-15	NA	102533517	102434383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102434548_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
ES.12926.92	chr15	-	7203	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	-56	0	-42	0	multi-exon	FALSE	canonical	3	22	junction_11	10.1696355688543	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTATGTTTGGTGCTTCC	NA	False	NA	-1	True	ATTAAA	-16	NA	102533941	102437070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
ES.12926.94	chr15	-	7457	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	-1	-4933	-1	-3	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTATGTTTGGTGCT	NA	False	NA	-4	True	ATTAAA	-13	NA	102533875	102437073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
ES.12926.98	chr15	-	6993	11	NIC	ENSMUSG00000099083.8	novel	2523	12	NA	NA	-7	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	16.2188162330054	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATGACTGGTATGTT	NA	False	NA	-11	True	ATTAAA	-6	NA	102533515	102437080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102502106_102502176_102533473
ES.12926.99	chr15	-	1602	1	ISM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	93537	1676	-2888	-1676	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAGAAATATGTACT	NA	False	NA	NA	False	NA	NA	NA	102440348	102438746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_102438700_102440300
ES.12927.1	chr15	+	376	1	FSM	ENSMUSG00000036305.8	ENSMUST00000146505.2	151	1	-53	-172	-53	172	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAACAGACCTTCAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	102543419	102543795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102543400_102543800
ES.12928.1	chr15	+	246	1	Intergenic	novelGene_10781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTGCATCAGTCCAG	NA	False	NA	NA	False	NA	NA	NA	102560615	102560861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102560600_102560900
ES.12929.1	chr15	+	2013	1	Genic_Genomic	ENSMUSG00000116056.2	novel	NA	NA	NA	NA	593	835	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102567725	102569738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102567700_102569700
ES.1293.1	chr1	-	354	1	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTGGGGGGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	131799268	131798914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131798900_131799300
ES.1293.2	chr1	-	174	1	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	131799270	131799096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131799100_131799300
ES.12930.1	chr15	+	4089	1	Antisense	novelGene_ENSMUSG00000062683.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGGGAATTAAATTTAAT	NA	False	NA	NA	False	AGTAAA	-23	NA	102574430	102578519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_102574400_102578500
ES.12931.1	chr15	-	6870	4	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	90	4304	intron_retention	FALSE	canonical	3	3206	junction_3	741.096634874442	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAACACTTGTCCAGGT	3991	False	NA	NA	False	NA	NA	NA	102579472	102566994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102573683_102574197_102574291_102576145_102576215_102579452
ES.12931.12	chr15	-	747	5	Fusion	ENSMUSG00000076009.3_ENSMUSG00000062683.12	novel	731	5	NA	NA	10	-7	multi-exon	FALSE	canonical	2	115	junction_4	2005.23968330472	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGTTTCTTGAGTC	3172	False	NA	-18	True	AATAAA	-10	NA	102580291	102571305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102580158
ES.12931.13	chr15	-	349	3	NNC	ENSMUSG00000062683.12	novel	441	4	NA	NA	80	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2340	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGTTTCTTGAGTC	3981	False	NA	-18	True	AATAAA	-10	NA	102579482	102571305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102571564_102573488_102573536_102579438
ES.12931.14	chr15	-	5084	1	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	80	-163	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGACTGATTCAAGGT	3981	False	NA	NA	False	NA	NA	NA	102579482	102574398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102574400_102579500
ES.12931.2	chr15	-	708	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	28	-5	28	5	multi-exon	FALSE	canonical	3	3206	junction_4	667.870870752723	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCCTGTGTATAT	3929	False	NA	-6	True	AATAAA	-22	NA	102579534	102571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ES.12931.3	chr15	-	2088	5	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	105	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2055.0231750518	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGAGTCTCCTGTGTAT	4006	False	NA	-8	True	AATAAA	-20	NA	102579457	102571295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102577993
ES.12931.4	chr15	-	3922	4	FSM	ENSMUSG00000062683.12	ENSMUST00000075630.10	441	4	-3328	-153	50	3	multi-exon	FALSE	canonical	3	4680	junction_1	53.4935094712953	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGAGTCTCCTGTGTAT	3951	False	NA	-8	True	AATAAA	-20	NA	102579512	102571295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145
ES.12931.5	chr15	-	5131	3	FSM	ENSMUSG00000062683.12	ENSMUST00000187160.2	635	3	-2621	-1875	763	0	multi-exon	FALSE	canonical	3	4743	junction_1	34	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	4664	False	NA	-11	True	AATAAA	-17	NA	102578799	102571298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102573683_102574197_102574291_102576145
ES.12931.6	chr15	-	854	6	NNC	ENSMUSG00000062683.12	novel	731	5	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2298.09498498213	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTGAGTCTCCTGT	2658	False	NA	-12	True	AATAAA	-16	NA	102580805	102571299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579680_102579782_102580672
ES.12931.7	chr15	-	7649	2	ISM	ENSMUSG00000062683.12	ENSMUST00000187160.2	635	3	-3286	-1873	98	-2	intron_retention	FALSE	canonical	3	4743	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCTTGAGTCTCCTG	3999	False	NA	-13	True	AATAAA	-15	NA	102579464	102571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_102573683_102574197
ES.12931.9	chr15	-	2570	4	NIC	ENSMUSG00000062683.12	novel	731	5	NA	NA	79	-7	intron_retention	FALSE	canonical	3	3206	junction_3	741.096634874442	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGTTTCTTGAGTC	3980	False	NA	-18	True	AATAAA	-10	NA	102579483	102571305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102573683_102574197_102574291_102576145_102576215_102579452
ES.12932.1	chr15	-	186	1	Intergenic	novelGene_10782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	102598096	102597910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102597900_102598100
ES.12933.1	chr15	-	3591	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	73	-840	26	840	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCCTCTCTTCCTTTAT	NA	False	NA	NA	False	AATGAA	-30	NA	102630540	102614371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ES.12933.2	chr15	-	2754	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	75	-5	28	5	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGACGTATGTTCTTAT	NA	False	NA	-1	True	AATATA	-24	NA	102630538	102615206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ES.12933.3	chr15	-	3912	13	NIC	ENSMUSG00000023055.11	novel	2968	14	NA	NA	29	-2	intron_retention	FALSE	canonical	3	88	junction_12	14.8912726118354	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTGTCATGACGTATG	NA	False	NA	-8	True	AATATA	-17	NA	102630537	102615213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102617088_102617510_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ES.12933.6	chr15	-	2976	14	FSM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	-1	-7	-1	7	multi-exon	FALSE	canonical	3	88	junction_13	14.4115338424578	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTGTCTTTCCTCA	NA	False	NA	NA	False	AATAAA	-24	NA	102630567	102616012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ES.12933.7	chr15	-	6433	4	NIC	ENSMUSG00000023055.11	novel	2968	14	NA	NA	58	29	intron_retention	FALSE	canonical	3	89	junction_2	16.391054470859	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAATGAATTCAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	102630508	102621216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_102624824_102626237_102626429_102627408_102627512_102627976
ES.12933.8	chr15	-	3780	1	FSM	ENSMUSG00000023055.11	ENSMUST00000230374.2	1732	1	-2024	-24	-770	24	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAGAATGAATTCAAA	466	False	NA	NA	False	NA	NA	NA	102625001	102621221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_102621200_102625000
ES.12934.1	chr15	-	152	1	Intergenic	novelGene_10783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	102690647	102690495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102690500_102690600
ES.12935.1	chr15	+	248	1	Intergenic	novelGene_10784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTAATTGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	102809570	102809818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102809600_102809800
ES.12936.1	chr15	+	2475	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	-15	1	-15	-1	multi-exon	FALSE	canonical	3	47	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGCTTGGGATCCT	NA	False	NA	16	True	AATAAA	-24	NA	102829522	102837248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102830353_102835603
ES.12936.2	chr15	+	1337	1	Genic_Genomic	ENSMUSG00000001655.7	novel	NA	NA	NA	NA	-6	-6381	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAATGTACAATTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	102829531	102830868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102829500_102830900
ES.12937.1	chr15	-	876	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTATTATTGATTTTT	NA	False	NA	-2	True	NA	NA	NA	102840062	102835259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102835785_102839711
ES.12937.2	chr15	-	3592	1	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGGGGAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102840089	102836497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102836500_102840100
ES.12937.3	chr15	-	2537	2	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	GGGGCT	-31	NA	102840079	102836524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102838282_102839299
ES.12937.4	chr15	-	2829	1	Antisense	novelGene_ENSMUSG00000001655.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGAGTTTGTGGGGTT	NA	False	NA	NA	False	AATAAA	-34	NA	102840046	102837217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102837200_102840000
ES.12937.5	chr15	-	755	1	Intergenic	novelGene_10785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTGAGATGAGTGTG	NA	False	NA	-3	True	AATAAA	-14	NA	102840071	102839316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_102839300_102840100
ES.12938.1	chr15	+	3681	1	Intergenic	novelGene_10786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCTTGGTGAGCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	102840332	102844013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_102840300_102844000
ES.12938.10	chr15	+	1886	2	Fusion	ENSMUSG00000022484.8_ENSMUSG00000001656.4	novel	2021	2	NA	NA	-14	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCAAATGGATGGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	102862847	102880323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr15_+_102863643_102879232
ES.12938.11	chr15	+	1743	2	FSM	ENSMUSG00000022484.8	ENSMUST00000001699.8	1909	2	168	-2	168	2	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGATGGGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	102875398	102880330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102876044_102879232
ES.12938.2	chr15	+	2769	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4777	2250	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTGAGAACCATTTCT	NA	False	NA	25	True	ATTAAA	-22	NA	102840414	102849294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102840603_102846713
ES.12938.3	chr15	+	1179	2	NNC	ENSMUSG00000022484.8	novel	1909	2	NA	NA	-34718	-7	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCTCAAATGGATGGG	NA	False	NA	NA	False	AATAAA	-12	NA	102840512	102880321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102840603_102879232
ES.12938.4	chr15	+	1707	3	NNC	ENSMUSG00000022484.8	novel	1909	2	NA	NA	-34711	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGATGGGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	102840519	102880330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102840603_102875517_102876044_102879232
ES.12938.5	chr15	+	3394	4	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4657	2245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3137084989848	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATGTTTTGAGAACCA	NA	False	NA	20	True	ATTAAA	-17	NA	102840534	102849289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102840603_102843860_102843967_102845247_102845892_102846713
ES.12938.6	chr15	+	3147	3	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4617	2245	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATGTTTTGAGAACCA	NA	False	NA	20	True	ATTAAA	-17	NA	102840574	102849289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102840603_102845348_102845892_102846713
ES.12938.7	chr15	+	4436	1	Genic_Genomic	ENSMUSG00000050328.3	novel	NA	NA	NA	NA	-341	2242	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTGATGTTTTGAGAA	NA	False	NA	17	True	ATTAAA	-14	NA	102844850	102849286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_+_102844800_102849300
ES.12938.8	chr15	+	3245	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	56	2243	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGATGTTTTGAGAAC	NA	False	NA	18	True	ATTAAA	-15	NA	102845247	102849287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_102845892_102846686
ES.12938.9	chr15	+	3353	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	71	-2393	71	2393	multi-exon	FALSE	canonical	3	24	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAAAGAGCAGT	NA	False	NA	NA	False	AATAAA	-6	NA	102845262	102849437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102845892_102846713
ES.12939.1	chr15	-	5098	1	Antisense	novelGene_ENSMUSG00000050328.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGCCACCAAAAATATCC	NA	False	NA	NA	False	NA	NA	NA	102850048	102844950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102845000_102850000
ES.12939.2	chr15	-	1261	2	Antisense	novelGene_ENSMUSG00000050328.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102847063	102844982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102845890_102846709
ES.1294.1	chr1	-	866	3	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTATTATTGTTACTG	6631	False	NA	NA	False	AATAGA	-24	NA	131821196	131801310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131801968_131802327_131802419_131821078
ES.12940.1	chr15	-	659	1	Antisense	novelGene_ENSMUSG00000001661.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGCCAAATAAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	102907685	102907026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_102907000_102907700
ES.12941.1	chr15	+	1984	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	-2	1	-2	-1	multi-exon	FALSE	canonical	3	38	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCAATGTCTGATGGTTT	5970	False	NA	29	True	AATAAA	-23	NA	102942818	102945277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_102943588_102944062
ES.12942.1	chr15	-	4739	3	NIC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	8	0	intron_retention	TRUE	canonical	3	65	junction_2	7.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	-1	True	NA	NA	NA	103071737	103061716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103066346_103066583_103066655_103071698
ES.12942.10	chr15	-	4062	8	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	-3721	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.0978952087984	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTCCCCCCTGAGTT	NA	False	NA	-18	True	NA	NA	NA	103079240	103061733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698_103071865_103072962_103073139_103073227_103073391_103075427_103075512_103079035
ES.12942.11	chr15	-	7153	2	NNC	ENSMUSG00000036061.11	novel	3281	2	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGTTTTCCCCCCTGA	NA	False	NA	-21	True	NA	NA	NA	103071739	103061736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103065232_103068081
ES.12942.12	chr15	-	2306	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	20	-1835	20	-2	multi-exon	FALSE	canonical	3	15	junction_2	46	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGGTCTCTCCTCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	103071725	103062651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103064629_103066043_103066346_103071698
ES.12942.13	chr15	-	2094	2	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	-1	-2016	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	103071746	103066502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103068052_103071201
ES.12942.14	chr15	-	1196	1	Intergenic	novelGene_10787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAGCGCCATCAATCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	103078816	103077620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103077600_103078800
ES.12942.2	chr15	-	4009	8	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	-3368	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.0978952087984	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	False	NA	-1	True	NA	NA	NA	103078887	103061716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698_103071865_103072962_103073139_103073227_103073391_103075427_103075512_103078752
ES.12942.3	chr15	-	3358	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	37.6061460697879	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTTTGCAAATTAC	NA	False	NA	-2	True	NA	NA	NA	103071741	103061717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103064629_103066043_103066346_103066552_103066655_103071698
ES.12942.4	chr15	-	3278	3	FSM	ENSMUSG00000036061.11	ENSMUST00000231198.2	491	3	-19	-2768	-10	-2	multi-exon	FALSE	canonical	3	15	junction_2	46	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGTTTTGCAAATTA	NA	False	NA	-3	True	NA	NA	NA	103071764	103061718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103064629_103066043_103066346_103071698
ES.12942.5	chr15	-	3200	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	33.7934904974316	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGTTTTGCAAATT	NA	False	NA	-4	True	NA	NA	NA	103071751	103061719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103064629_103066178_103066346_103066583_103066655_103071698
ES.12942.6	chr15	-	3277	4	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	12	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	47.3028070578856	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGTTTTGCAAATT	NA	False	NA	-4	True	NA	NA	NA	103071733	103061719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103064629_103066043_103066346_103066552_103066584_103071698
ES.12942.8	chr15	-	2406	5	NNC	ENSMUSG00000036061.11	novel	3882	7	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3636888515291	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTGTTTTGCAAAT	NA	False	NA	-5	True	NA	NA	NA	103071732	103061720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103063600_103064508_103064629_103066043_103066346_103066583_103066655_103071698
ES.12942.9	chr15	-	5643	1	NIC	ENSMUSG00000036061.11	novel	3601	5	NA	NA	-938	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGAGTTTTGTTTTGC	NA	False	NA	-9	True	NA	NA	NA	103067367	103061724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103061700_103067400
ES.12943.1	chr15	+	160	1	Intergenic	novelGene_10788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103118325	103118485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_103118300_103118500
ES.12944.1	chr15	+	3578	1	Intergenic	novelGene_10789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103129644	103133222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_103129600_103133200
ES.12945.1	chr15	+	1851	1	Intergenic	novelGene_10791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAACAAAGTATTACTAC	NA	False	NA	NA	False	NA	NA	NA	103134934	103136785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_103134900_103136800
ES.12946.1	chr15	+	2116	12	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-552	11	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	5211.08166782678	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATGGATTTGGGACT	NA	False	NA	10	True	AATAAA	-28	NA	103148306	103153393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148909_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.10	chr15	+	1868	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-459	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4043.62007241037	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148399	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148894_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.101	chr15	+	1687	9	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4458.16890487283	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAACTGTATGGATT	NA	False	NA	3	True	AATAAA	-21	NA	103148859	103153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103152051_103152208_103152385_103152456_103152682
ES.12946.107	chr15	+	1654	8	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	2	-366	intron_retention	FALSE	canonical	3	9291	junction_5	1701.77935690613	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTGTGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	103148860	103153016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150726_103150806_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.108	chr15	+	2838	8	NIC	ENSMUSG00000046434.17	novel	1541	9	NA	NA	2	-3	intron_retention	FALSE	canonical	3	11523	junction_6	1155.33665029298	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGGAATGACAACTGT	NA	False	NA	-4	True	AATAAA	-14	NA	103148860	103153379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103152456_103152682
ES.12946.109	chr15	+	1746	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5196.61719027121	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148861	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148949_103149506_103149621_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.111	chr15	+	1749	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4242.03020344193	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148861	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150717_103150802_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.113	chr15	+	1785	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4006.43528018624	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148861	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149841_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.114	chr15	+	1567	13	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	5991.53844264745	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTGTCTTCCTTTGT	NA	False	NA	17	True	AATAAA	-17	NA	103148863	103155123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103154095_103154222_103154772_103154849_103154971
ES.12946.118	chr15	+	1502	12	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5220.66311452596	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148876	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682_103152960_103153355
ES.12946.119	chr15	+	2976	12	NIC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_10	4921.82743727511	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148876	103155119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682_103154394_103154772_103154849_103154971
ES.12946.12	chr15	+	1946	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	-445	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4239.91136641578	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148413	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148894_103148956_103149506_103149624_103149872_103150020_103150329_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.122	chr15	+	1733	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4202.00687796547	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAACTGTATGGATT	NA	False	NA	3	True	AATAAA	-21	NA	103148879	103153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150338_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.123	chr15	+	1636	9	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4458.16890487283	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148879	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150873_103152051_103152208_103152385_103152456_103152682
ES.12946.125	chr15	+	2989	7	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	12199	junction_1	1085.08166615339	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGGAATGACAACTGT	NA	False	NA	-4	True	AATAAA	-14	NA	103148880	103153379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103152456_103152682
ES.12946.128	chr15	+	3009	4	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	0	-551	intron_retention	FALSE	canonical	3	12199	junction_1	481.601725725959	4137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCCAGGACTGTATT	NA	False	NA	NA	False	NA	NA	NA	103148880	103152831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103150020_103150329_103150726_103150806
ES.12946.129	chr15	+	3128	13	FSM	ENSMUSG00000046434.17	ENSMUST00000230489.2	3118	13	-12	2	1	-2	multi-exon	FALSE	canonical	2	11	junction_11	5605.39520548928	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148881	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682_103154394_103154772_103154849_103154971
ES.12946.131	chr15	+	1666	9	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	584	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4482.88617271284	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103149504	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103149624_103149872_103150020_103150329_103150541_103150632_103150728_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.132	chr15	+	971	4	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1884	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4989.81222091573	4153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103150804	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103150900_103151070_103151146_103152051_103152137_103152664
ES.12946.133	chr15	+	320	3	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	4558	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	325.5	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTTTCTTGTCTTCC	NA	False	NA	12	True	AATAAA	-12	NA	103153478	103155118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103153576_103154772_103154849_103154971
ES.12946.17	chr15	+	2820	13	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-361	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	5489.10568699998	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148497	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682_103154222_103154772_103154849_103154971
ES.12946.18	chr15	+	1466	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-82	353	-60	-353	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	4146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAGTCTATTCTGAAG	NA	False	NA	NA	False	AATAAA	-37	NA	103148798	103153029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.2	chr15	+	1584	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-552	-366	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	4002.55468919539	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTGTGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	103148306	103153016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.20	chr15	+	1598	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	-46	366	-46	-366	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTGTGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	103148812	103153016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.22	chr15	+	1968	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	-45	-5	-45	5	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAACTGTATGGATTT	NA	False	NA	4	True	AATAAA	-22	NA	103148813	103153387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.24	chr15	+	1319	11	FSM	ENSMUSG00000046434.17	ENSMUST00000230171.2	1283	11	-32	-4	-32	4	multi-exon	FALSE	canonical	3	551	junction_9	4985.84843431888	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTGTCTTCCTTTGT	NA	False	NA	17	True	AATAAA	-17	NA	103148826	103155123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154772_103154849_103154971
ES.12946.32	chr15	+	1456	12	NIC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	551	junction_10	5655.9318411501	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148842	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103154772_103154849_103154971
ES.12946.38	chr15	+	1386	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4250.75671985095	4145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGCTGTGTAAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	103148858	103153015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148950_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.4	chr15	+	1912	11	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	-509	5	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	4002.55468919539	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAACTGTATGGATTT	NA	False	NA	4	True	AATAAA	-22	NA	103148349	103153387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.40	chr15	+	3757	11	NIC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	651	junction_10	5267.20968255489	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148858	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103154849_103154971
ES.12946.41	chr15	+	3598	10	NIC	ENSMUSG00000046434.17	novel	1283	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	651	junction_9	4035.1621596066	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148858	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103154849_103154971
ES.12946.46	chr15	+	1741	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5493.51522981842	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATGACAACTGTATGG	NA	False	NA	0	True	AATAAA	-18	NA	103148858	103153383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150525_103150632_103150726_103150806_103150897_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.47	chr15	+	3654	4	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	12199	junction_1	289.459649845862	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103150541_103150632_103152456_103152682
ES.12946.49	chr15	+	1790	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	12565	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4043.62007241036	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGTCTTACTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	103148858	103167684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682_103153379_103167649
ES.12946.5	chr15	+	1697	12	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-506	-366	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	5195.58052340704	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTGTGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	103148352	103153016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.50	chr15	+	1960	13	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	12565	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5690.6581408822	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGTCTTACTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	103148858	103167684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682_103153367_103161923_103161952_103167654
ES.12946.51	chr15	+	1687	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4203.54500597816	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152150_103152399_103152456_103152682
ES.12946.54	chr15	+	2145	10	ISM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	0	0	0	0	intron_retention	FALSE	canonical	3	2223	junction_7	4575.78355160197	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385
ES.12946.55	chr15	+	1986	9	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-22	0	0	0	intron_retention	FALSE	canonical	3	9291	junction_7	1634.48477642803	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385
ES.12946.57	chr15	+	2217	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-22	-458	0	458	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGCATAGGTTCTTAA	NA	False	NA	NA	False	AAAACA	-18	NA	103148858	103153840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.58	chr15	+	3108	6	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	12199	junction_1	1151.01822748382	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGACAACTGTATGGA	NA	False	NA	1	True	AATAAA	-19	NA	103148858	103153384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150726_103150806_103152456_103152682
ES.12946.59	chr15	+	3907	10	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	16	junction_8	5333.3779812946	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTCTTGTCTTCCTT	NA	False	NA	14	True	AATAAA	-14	NA	103148858	103155120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103152456_103152682_103154222_103154772_103154849_103154971
ES.12946.6	chr15	+	2329	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-523	-69	-501	69	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCATTGTTTGTTAC	NA	False	NA	68	True	NA	NA	NA	103148357	103153451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.61	chr15	+	2353	7	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6305.0883595888	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148859	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149605_103152051_103152208_103152385_103152456_103152682_103154394_103154772_103154849_103154971
ES.12946.62	chr15	+	2281	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	1	-364	1	364	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTGTATTAACGGCAG	NA	False	NA	NA	False	AATACA	-19	NA	103148859	103153746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.63	chr15	+	2820	12	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	4920.87388429372	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTTTCTTGTCTTCC	NA	False	NA	12	True	AATAAA	-12	NA	103148859	103155118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682_103154222_103154772_103154849_103154971
ES.12946.66	chr15	+	3046	11	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16	junction_9	5090.17268469352	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148859	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103154222_103154772_103154849_103154971
ES.12946.67	chr15	+	1905	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5404.69831257953	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAACTGTATGGATT	NA	False	NA	3	True	AATAAA	-21	NA	103148859	103153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150708_103150804_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.69	chr15	+	1665	9	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4497.44259968929	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.7	chr15	+	1414	12	NNC	ENSMUSG00000046434.17	novel	1283	11	NA	NA	-494	-2	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	5553.58340128618	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148364	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154772_103154849_103154971
ES.12946.70	chr15	+	1848	9	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	9291	junction_6	1639.64911928589	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148859	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.73	chr15	+	1935	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	4867.41090930281	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152033_103152208_103152385_103152456_103152682
ES.12946.74	chr15	+	1908	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5380.23027852898	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152691
ES.12946.76	chr15	+	2465	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	1	-548	1	548	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTATTCCAACTCATG	NA	False	NA	NA	False	NA	NA	NA	103148859	103153930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.78	chr15	+	2274	11	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	1	-2	intron_retention	FALSE	canonical	2	6	junction_9	5092.15048481484	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTTTCTTGTCTTC	NA	False	NA	11	True	AATAAA	-11	NA	103148859	103155117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103153450_103154772_103154849_103154971
ES.12946.8	chr15	+	2051	12	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-483	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5220.66311452596	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148375	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148894_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.80	chr15	+	1691	9	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5256.8489611173	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152682
ES.12946.81	chr15	+	1751	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_5	4231.78882585919	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150813_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.82	chr15	+	1943	7	NIC	ENSMUSG00000046434.17	novel	1541	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	59	junction_5	4667.08191307302	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103150020_103150329_103150726_103150806_103150900_103151070_103151146_103152385_103152456_103152682
ES.12946.83	chr15	+	1778	10	ISM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	1	366	1	-366	intron_retention	FALSE	canonical	3	2223	junction_7	4575.78355160197	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTGTGTAAAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	103148859	103153016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385
ES.12946.84	chr15	+	1423	12	NNC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	5651.07544507684	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTGTCTTCCTTTGT	NA	False	NA	17	True	AATAAA	-17	NA	103148859	103155123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154084_103154222_103154772_103154849_103154971
ES.12946.85	chr15	+	1375	10	NNC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4203.20242989398	4145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGCTGTGTAAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	103148859	103153014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152066_103152208_103152385_103152456_103152682
ES.12946.88	chr15	+	1929	9	NIC	ENSMUSG00000046434.17	novel	1737	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	9291	junction_6	1592.78292227786	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.9	chr15	+	1678	12	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-477	-367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5220.66311452596	4145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGCTGTGTAAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	103148381	103153015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148545_103148894_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.91	chr15	+	1168	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	-21	590	1	-590	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	4134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGACATGTTTTAGAC	NA	False	NA	NA	False	NA	NA	NA	103148859	103152792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ES.12946.93	chr15	+	1817	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4857.49890375695	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148859	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151113_103151413_103151508_103152051_103152208_103152385_103152456_103152682
ES.12946.96	chr15	+	1759	10	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	67	junction_8	5026.29424890179	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGGAATGACAACTGTA	NA	False	NA	-3	True	AATAAA	-15	NA	103148859	103153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152385_103152456_103152682
ES.12946.97	chr15	+	1764	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	4867.62863106873	4154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148859	103153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151481_103152177_103152208_103152385_103152456_103152682
ES.12947.1	chr15	-	9283	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-12	-468	-12	468	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGACTGTATCATCTTT	NA	False	NA	NA	False	AATAAA	-44	NA	103148255	103099502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.10	chr15	-	8827	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	192.229680330588	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148293	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148183
ES.12947.11	chr15	-	8973	7	NNC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	218.92895854338	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148251	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103130163_103130228_103148159
ES.12947.12	chr15	-	6217	7	NNC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.582554961125	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103123736	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103105120_103107761_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ES.12947.15	chr15	-	5830	6	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.835173569746	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTGAGTGGTAGTTT	NA	False	NA	-4	True	AATAAA	-18	NA	103148255	103099974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103104671_103107651_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.17	chr15	-	1874	6	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-63	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	180.835173569746	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGATCTTGAGTGGT	NA	False	NA	-9	True	AATAAA	-13	NA	103148306	103099979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103100944_103107926_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.18	chr15	-	4736	2	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	18932	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGATCTTGAGTGGT	NA	False	NA	-9	True	AATAAA	-13	NA	103104800	103099979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103100529_103100613
ES.12947.2	chr15	-	9333	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	-11	-8176	-11	465	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGTGACTGTATCATC	NA	False	NA	NA	False	AATAAA	-41	NA	103123743	103099505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ES.12947.20	chr15	-	2059	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	46080	134	21569	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATTATGTCATTCTAC	NA	False	NA	NA	False	NA	NA	NA	103102163	103100104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_103100100_103102200
ES.12947.21	chr15	-	6368	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-26	2461	-26	-2461	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTTGCTGTATCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	103148269	103102431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.22	chr15	-	5698	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-50	3155	-50	1988	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGTTCACCAATGC	NA	False	NA	NA	False	TTTAAA	-16	NA	103148293	103103125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.23	chr15	-	5493	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-40	3350	-40	1793	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTCTCATTTTTTGTAG	NA	False	NA	NA	False	NA	NA	NA	103148283	103103320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.24	chr15	-	5285	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	-6	-4133	-6	1565	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCTGGCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	103123738	103103548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ES.12947.25	chr15	-	4942	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-50	3911	-50	1232	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGAGTGCAGATACGTG	NA	False	NA	NA	False	AATAAA	-19	NA	103148293	103103881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.26	chr15	-	4850	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	42	-1231	-5	1231	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGAGTGCAGATACGT	NA	False	NA	NA	False	AATAAA	-18	NA	103123737	103103882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
ES.12947.27	chr15	-	3155	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	40324	4794	15813	349	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTATAGATTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	103107919	103104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr15_-_103104800_103107900
ES.12947.28	chr15	-	3238	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-30	-556	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	209.116809463037	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTAATGCTCTTTGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	103148273	103105669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103148159
ES.12947.29	chr15	-	3105	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-51	5749	-51	-606	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTTAATGCCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	103148294	103105719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.3	chr15	-	8864	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-61	0	-61	0	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	False	NA	0	True	AATAAA	-22	NA	103148304	103099970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.31	chr15	-	2428	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-7	6382	-7	-1239	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTGAGAAGGCAGCTTG	NA	False	NA	NA	False	NA	NA	NA	103148250	103106352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.33	chr15	-	2549	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	-81	-1322	-20	-1246	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGCACCGTTGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	103123813	103106359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ES.12947.35	chr15	-	2243	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-51	6611	-51	1100	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGCGTTTGATT	NA	False	NA	0	True	NA	NA	NA	103148294	103106581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.36	chr15	-	2179	6	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-25	1100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.835173569746	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGCGTTTGATT	NA	False	NA	0	True	NA	NA	NA	103148268	103106581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103107324_103107361_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.37	chr15	-	2226	6	NNC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	6	1078	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_5	209.392072438285	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGTCAGCTACTGAGCT	NA	False	NA	-22	True	AATAAA	-24	NA	103123726	103106603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103123690
ES.12947.38	chr15	-	2158	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-25	1070	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	230.078790852177	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGACTTCGTCAGCT	NA	False	NA	-30	True	AATAAA	-16	NA	103148268	103106611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108214_103109227_103109329_103113918_103114106_103121498_103121682_103148183
ES.12947.39	chr15	-	2195	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-14	1068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.408216477825	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTCCAGACTTCGTCAG	NA	False	NA	-32	True	AATAAA	-14	NA	103148257	103106613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108240_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.4	chr15	-	8961	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-60	-2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103148303	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
ES.12947.40	chr15	-	1481	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	6	337	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	209.392072438285	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTAAGCTGTAGTGCA	NA	False	NA	0	True	ATTAAA	-19	NA	103123726	103107344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103123694
ES.12947.41	chr15	-	1447	5	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-50	329	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	192.229680330588	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGGAGTCTGTAAGCT	NA	False	NA	-8	True	ATTAAA	-11	NA	103148293	103107352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148183
ES.12947.43	chr15	-	1482	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-61	7382	-61	329	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGGAGTCTGTAAGCT	NA	False	NA	-8	True	ATTAAA	-11	NA	103148304	103107352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.44	chr15	-	1220	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-50	7633	-50	78	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGTGTCTTTTCCGA	NA	False	NA	68	True	NA	NA	NA	103148293	103107603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.45	chr15	-	1232	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGGCCTTTGTTTTG	NA	False	NA	-10	True	NA	NA	NA	103148283	103107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
ES.12947.46	chr15	-	1062	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-41	7782	-41	-71	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTGCTTTGGGAGATT	NA	False	NA	-81	True	NA	NA	NA	103148284	103107752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.47	chr15	-	931	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	-44	7916	-44	-205	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGCTCTGTGAACGT	NA	False	NA	-6	True	AATATA	-19	NA	103148287	103107886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ES.12947.48	chr15	-	927	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	6	213	6	-213	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTAAGTGTAGCTCT	NA	False	NA	-14	True	AATATA	-11	NA	103123726	103107894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ES.12947.49	chr15	-	1026	6	NIC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	-47	-213	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTAAGTGTAGCTCT	NA	False	NA	-14	True	AATATA	-11	NA	103148290	103107894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
ES.12947.5	chr15	-	8896	6	NNC	ENSMUSG00000009575.15	novel	1146	6	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	210.220265436042	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103123769	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123690
ES.12947.50	chr15	-	821	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	53	2787	6	-219	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTGATTCCTAAGTGT	NA	False	NA	-20	True	AATATA	-5	NA	103123726	103107900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
ES.12947.51	chr15	-	1805	2	Genic_Genomic	ENSMUSG00000009575.15	novel	8803	5	NA	NA	-3	-6515	multi-exon	TRUE	non_canonical	0	0	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTGGGATTTTGGTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	103148246	103128023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_103128160_103146577
ES.12947.52	chr15	-	1074	1	Intergenic	novelGene_10790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATCTTTAGCCGGGT	NA	False	NA	NA	False	NA	NA	NA	103132132	103131058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103131100_103132100
ES.12947.53	chr15	-	4546	1	Intergenic	novelGene_10792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAACACATAAATGTAAT	NA	False	NA	NA	False	AATAAA	-37	NA	103141826	103137280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103137300_103141800
ES.12947.54	chr15	-	1816	1	Genic_Genomic	ENSMUSG00000009575.15	novel	NA	NA	NA	NA	-60	-24979	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGGGGGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	103148303	103146487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr15_-_103146500_103148300
ES.12947.6	chr15	-	6059	2	NNC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	17100	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103106632	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103102675_103103275
ES.12947.9	chr15	-	8782	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	20	-5141	20	-2	multi-exon	FALSE	canonical	3	24	junction_4	189.635176061827	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGAGTGGTAGTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	103123759	103099972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
ES.12948.1	chr15	-	1629	3	FSM	ENSMUSG00000058794.13	ENSMUST00000075192.13	1697	3	67	1	67	-1	multi-exon	FALSE	canonical	0	0	junction_2	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTGTGTCTTCTTTG	4238	False	NA	NA	False	CATAAA	-19	NA	103163799	103156639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103157876_103159355_103159526_103163576
ES.12948.2	chr15	-	1741	4	NNC	ENSMUSG00000058794.13	novel	1697	3	NA	NA	60	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	6.53197264742181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCTTTCTATTGTGTC	4231	False	NA	NA	False	CATAAA	-12	NA	103163806	103156646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103157876_103159355_103159526_103161469_103161582_103163576
ES.12948.3	chr15	-	1784	3	FSM	ENSMUSG00000058794.13	ENSMUST00000149111.8	1878	3	94	0	-66	0	multi-exon	FALSE	canonical	0	0	junction_2	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCTTTCTATTGTGTC	8028	False	NA	NA	False	CATAAA	-12	NA	103160009	103156646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103157876_103159355_103159526_103159624
ES.12949.10	chr15	+	1657	8	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	380.382460592665	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181326	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205042_103206288_103206353_103207119
ES.12949.12	chr15	+	2259	8	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	1	intron_retention	FALSE	canonical	3	554	junction_1	185.288743228905	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGATGGCTCTGTT	NA	False	NA	33	True	AATAAA	-21	NA	103181326	103208296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103199101_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ES.12949.13	chr15	+	2781	8	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	554	junction_1	185.443759008229	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181326	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103206353_103207119
ES.12949.14	chr15	+	1602	8	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	378.353360373768	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181326	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103205160_103205213_103206313_103206353_103207119
ES.12949.15	chr15	+	180	2	Antisense	novelGene_ENSMUSG00000063234.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	377	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAATTCAGACA	NA	False	NA	NA	False	NA	NA	NA	103202734	103219991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_103202892_103219968
ES.12949.2	chr15	+	1706	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-29	-1	-20	1	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGATGGCTCTGTT	NA	False	NA	33	True	AATAAA	-21	NA	103181307	103208296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ES.12949.3	chr15	+	4214	7	NIC	ENSMUSG00000060992.10	novel	2438	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	554	junction_1	199.087083123609	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	29	True	AATAAA	-17	NA	103181317	103208292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103205038_103205160_103205213_103206313
ES.12949.4	chr15	+	1685	8	NNC	ENSMUSG00000060992.10	novel	2438	8	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	382.981856020382	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181317	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205218_103207089
ES.12949.5	chr15	+	1511	7	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	376.026447060428	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181321	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ES.12949.6	chr15	+	1321	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	-10	365	-1	-362	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAATGACGTTGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	103181326	103207930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ES.12949.7	chr15	+	1631	10	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	344.282972904701	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181326	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119_103208018_103208066
ES.12949.8	chr15	+	3435	8	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	554	junction_1	185.051123658699	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	False	NA	26	True	AATAAA	-14	NA	103181326	103208289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103205038_103205160_103205213_103206313_103206353_103207119
ES.12949.9	chr15	+	1834	10	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	422.551801192893	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGATGGCTCTGTT	NA	False	NA	33	True	AATAAA	-21	NA	103181326	103208296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103206890_103207038_103207119
ES.1295.1	chr1	-	174	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGACCATCTC	NA	False	NA	NA	False	NA	NA	NA	131830363	131830189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131830200_131830400
ES.12950.1	chr15	-	4526	1	Intergenic	novelGene_10793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGGTGTGGTGGTACAT	7868	False	NA	NA	False	NA	NA	NA	103188946	103184420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103184400_103188900
ES.12950.2	chr15	-	175	1	Intergenic	novelGene_10794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8518	False	NA	NA	False	NA	NA	NA	103184864	103184689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103184700_103184900
ES.12951.1	chr15	-	157	1	Intergenic	novelGene_10795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATCTAAAA	7298	False	NA	NA	False	NA	NA	NA	103192331	103192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103192200_103192300
ES.12952.1	chr15	-	4741	4	Antisense	novelGene_ENSMUSG00000116308.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCTGATGGATTAGTAA	6749	False	NA	NA	False	NA	NA	NA	103209524	103201804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_-_103203203_103204957_103205037_103205159_103205211_103206311
ES.12953.1	chr15	+	5458	1	Antisense	novelGene_ENSMUSG00000000552.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103222578	103228036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_103222600_103228000
ES.12953.2	chr15	+	3159	1	Antisense	novelGene_ENSMUSG00000000552.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAAAAGAAAGTAGAGATC	NA	False	NA	NA	False	NA	NA	NA	103225183	103228342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_103225200_103228300
ES.12954.1	chr15	-	2312	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	-76	-15	-76	2	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGACTCAGACTGTCTTT	8740	False	NA	-10	True	AATAAA	-26	NA	103232013	103222319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
ES.12954.2	chr15	-	2359	8	NNC	ENSMUSG00000000552.11	novel	2221	7	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	73.4738604080751	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACTCAGACTGTCTT	8811	False	NA	-11	True	AATAAA	-25	NA	103231942	103222320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103229496_103229616_103231817
ES.12954.3	chr15	-	2331	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	-32	-1	-32	1	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACTCAGACTGTCTT	6887	False	NA	-11	True	AATAAA	-25	NA	103248552	103222320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
ES.12954.4	chr15	-	4478	3	NIC	ENSMUSG00000000552.11	novel	2221	7	NA	NA	-30	0	intron_retention	FALSE	canonical	3	115	junction_2	13.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8786	False	NA	-12	True	AATAAA	-24	NA	103231967	103222321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103226539_103228716_103228828_103231817
ES.12954.5	chr15	-	1238	8	NNC	ENSMUSG00000000552.11	novel	2221	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.9901352434766	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8812	False	NA	-12	True	AATAAA	-24	NA	103231941	103222321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103222428_103223427_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
ES.12954.7	chr15	-	2602	5	NIC	ENSMUSG00000000552.11	novel	2221	7	NA	NA	-65	-2	intron_retention	FALSE	canonical	3	115	junction_4	27.8792037189013	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCAAGGACTCAGACTGT	8751	False	NA	-14	True	AATAAA	-22	NA	103232002	103222323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
ES.12955.1	chr15	-	5091	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	-26	-683	-26	683	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTGTTGTTTGCACAT	NA	False	NA	NA	False	AATAAA	-16	NA	103275216	103252029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.10	chr15	-	2664	17	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-2510	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.6993584109717	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGCAGTCTGTCCTT	NA	False	NA	-2	True	AATAAA	-24	NA	103267588	103252716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260006_103265346_103265409_103265618_103265740_103265874_103265988_103267476
ES.12955.11	chr15	-	4231	29	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	42.2539093711204	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	-3	True	AATAAA	-23	NA	103275170	103252717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265993_103274726
ES.12955.13	chr15	-	5091	27	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-26	-5	intron_retention	FALSE	canonical	3	172	junction_13	18.1347683328243	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	-3	True	AATAAA	-23	NA	103275216	103252717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.14	chr15	-	3989	31	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	154	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_30	42.0608157579263	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTGCAGTCTGTCCT	NA	False	NA	-3	True	AATAAA	-23	NA	103275021	103252717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726_103274771_103274989
ES.12955.16	chr15	-	4585	29	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	172	junction_15	18.0024091358317	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103275205	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.17	chr15	-	4134	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	188	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	41.5816032220506	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103274987	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267569_103274726
ES.12955.18	chr15	-	4376	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6253484787747	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103275216	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254404_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.2	chr15	-	4428	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	-46	0	-46	0	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275236	103252712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.20	chr15	-	4768	27	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	154	-6	intron_retention	FALSE	canonical	3	172	junction_14	18.5431290006863	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103275021	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.21	chr15	-	4774	28	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	90	-6	intron_retention	FALSE	canonical	3	172	junction_15	18.391341077034	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103275085	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.22	chr15	-	4173	20	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	551	-6	intron_retention	FALSE	canonical	3	172	junction_13	17.4684519750444	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103264527	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259873_103259967_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503
ES.12955.23	chr15	-	5028	29	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-53	-6	intron_retention	FALSE	canonical	3	172	junction_14	18.0484043050676	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTGCAGTCTGTCC	NA	False	NA	-4	True	AATAAA	-22	NA	103275243	103252718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.24	chr15	-	4226	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	51	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.7607619041182	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAAGTTGCAGTCTGTC	NA	False	NA	-5	True	AATAAA	-21	NA	103275124	103252719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259455_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.25	chr15	-	4253	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	101	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	42.7636537638477	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAAGTTGCAGTCTGTC	NA	False	NA	-5	True	AATAAA	-21	NA	103275074	103252719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265352_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.28	chr15	-	5216	26	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	152	-8	intron_retention	FALSE	canonical	3	182	junction_15	16.7952374201736	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAGTTGCAGTCTGT	NA	False	NA	-6	True	AATAAA	-20	NA	103275023	103252720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260597_103260684_103261013_103261342_103261389_103261569_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.29	chr15	-	5801	24	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-15	-8	intron_retention	FALSE	canonical	0	0	junction_14	47.168362726981	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAGTTGCAGTCTGT	NA	False	NA	-6	True	AATAAA	-20	NA	103275205	103252720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260597_103260684_103260741_103260910_103261011_103261342_103261389_103261569_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103265252_103265346_103265409_103265618_103265988_103267476_103267608_103274726
ES.12955.30	chr15	-	4279	29	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	180	-8	intron_retention	FALSE	non_canonical	0	0	junction_22	43.4968184386596	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAGTTGCAGTCTGT	NA	False	NA	-6	True	AATAAA	-20	NA	103274995	103252720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264560_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.31	chr15	-	4195	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	154	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	42.4695176409665	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAGTTGCAGTCTGT	NA	False	NA	-6	True	AATAAA	-20	NA	103275021	103252720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260096_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.32	chr15	-	4395	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-28	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.7314986284091	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCAAAGTTGCAGTCTG	NA	False	NA	-7	True	AATAAA	-19	NA	103275218	103252721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259810_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.34	chr15	-	4412	24	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-638	-10	intron_retention	FALSE	canonical	3	182	junction_16	15.0035912525165	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCAAAGTTGCAGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	103265716	103252722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103265252_103265346_103265409_103265618
ES.12955.36	chr15	-	4305	26	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-836	-10	intron_retention	FALSE	canonical	3	172	junction_15	16.3487002541486	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCAAAGTTGCAGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	103265914	103252722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103265252_103265346_103265409_103265618_103265740_103265874
ES.12955.38	chr15	-	4432	30	NNC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	36	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	42.5947080723292	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGACCAAAGTTGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	103275139	103252724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264662_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.4	chr15	-	4348	29	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	283	0	intron_retention	FALSE	canonical	3	172	junction_15	18.0722402415124	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103274892	103252712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.40	chr15	-	4186	29	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-26	-13	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	43.0522345292226	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGACCAAAGTTGCAG	NA	False	NA	-11	True	AATAAA	-15	NA	103275216	103252725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.41	chr15	-	4952	2	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-1176	-2091	intron_retention	FALSE	canonical	3	210	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCGGCAGGTGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	103266254	103261134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103262527_103262694
ES.12955.42	chr15	-	4551	8	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	-26	-2130	intron_retention	FALSE	canonical	3	192	junction_1	19.1971511491913	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103275216	103261173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103264397_103264503_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.43	chr15	-	1548	11	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	154	2334	intron_retention	FALSE	canonical	3	192	junction_3	17.9167519377816	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGACGGCTACAATGGT	NA	False	NA	NA	False	NA	NA	NA	103275021	103262018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12955.44	chr15	-	4383	2	Intergenic	novelGene_10796	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGGTTAAGAACATTGG	NA	False	NA	NA	False	NA	NA	NA	103273784	103269180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103270658_103270878
ES.12955.45	chr15	-	354	1	Intergenic	novelGene_10797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAGCCCAAGGGACCC	NA	False	NA	NA	False	NA	NA	NA	103271019	103270665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103270700_103271000
ES.12955.6	chr15	-	4770	26	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	154	0	intron_retention	FALSE	canonical	1	3	junction_25	43.3063505735591	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275021	103252712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103274726
ES.12955.7	chr15	-	4360	27	NIC	ENSMUSG00000000555.9	novel	4382	30	NA	NA	182	0	intron_retention	FALSE	canonical	0	0	junction_20	44.8950123084682	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103274993	103252712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262527_103262694_103262752_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ES.12956.1	chr15	-	176	1	Intergenic	novelGene_10798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	103281470	103281294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103281300_103281500
ES.12957.1	chr15	+	179	1	Intergenic	novelGene_10799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAGCCGTCTCTTCAT	673	False	NA	NA	False	NA	NA	NA	103297415	103297594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_103297400_103297600
ES.12958.1	chr15	-	131	1	Intergenic	novelGene_10800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9851	False	NA	NA	False	NA	NA	NA	103309873	103309742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103309700_103309900
ES.12959.1	chr15	+	4827	33	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-43533	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.84539078504653	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCGTGGATGTTTGCT	NA	False	NA	9	True	ATTAAA	-23	NA	103318687	103407236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103318841_103337911_103337955_103352712_103352775_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.10	chr15	+	3974	32	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42504	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	4.21359970530981	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCCGCTGGAGCTGCTA	NA	False	NA	5	True	ATTAAA	-18	NA	103319716	103406369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319946_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.11	chr15	+	4323	33	NNC	ENSMUSG00000022488.10	novel	4725	31	NA	NA	-42487	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.18411033833193	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCCGCTGGAGCTG	NA	False	NA	2	True	ATTAAA	-15	NA	103319733	103406366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319946_103337911_103337955_103362039_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.12	chr15	+	4862	33	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42434	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.11406868930175	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGATTGTGCGTGGA	NA	False	NA	1	True	ATTAAA	-15	NA	103319786	103407228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319946_103337911_103337955_103352675_103352775_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.13	chr15	+	180	1	Intergenic	novelGene_10804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTGAGGTG	NA	False	NA	NA	False	NA	NA	NA	103356096	103356276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_+_103356100_103356300
ES.12959.14	chr15	+	5168	30	NNC	ENSMUSG00000022488.10	novel	4725	31	NA	NA	-296	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	5.16804413126352	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATCCTCCCGCTGGAG	NA	False	NA	-1	True	ATTAAA	-12	NA	103361924	103406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380050_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.15	chr15	+	4781	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	-56	0	-23	0	multi-exon	FALSE	canonical	3	15	junction_9	3.63027394130097	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCGTGGATGTTTGCTT	NA	False	NA	10	True	ATTAAA	-24	NA	103362197	103407237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.17	chr15	+	4723	31	NNC	ENSMUSG00000022488.10	novel	4725	31	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.30869308043159	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCGTGGATG	NA	False	NA	3	True	ATTAAA	-17	NA	103362230	103407230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103362409_103363397_103363509_103364266_103364342_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.19	chr15	+	3718	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	3	1004	3	-132	multi-exon	FALSE	canonical	3	15	junction_9	3.63027394130097	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTGTGTATCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	103362256	103406233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.2	chr15	+	1349	4	Antisense	novelGene_ENSMUSG00000053508.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGATTCTGGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	103318806	103360627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr15_+_103318841_103337911_103337955_103352712_103352775_103359417
ES.12959.3	chr15	+	4150	32	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-43106	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	4.21359970530981	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCCGCTGGAGCTGC	NA	False	NA	3	True	ATTAAA	-16	NA	103319114	103406367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.4	chr15	+	4929	33	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42956	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.91797777433305	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGTGCGTGGATGTTTG	NA	False	NA	7	True	ATTAAA	-21	NA	103319264	103407234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103337911_103337955_103352712_103352775_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.5	chr15	+	4819	31	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42950	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08985919910037	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGGATGTTTGC	NA	False	NA	8	True	ATTAAA	-22	NA	103319270	103407235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.6	chr15	+	4849	32	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42927	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	5.33829547170107	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCGTGGATG	NA	False	NA	3	True	ATTAAA	-17	NA	103319293	103407230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390371_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.7	chr15	+	3911	31	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42908	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08985919910037	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCCGCTGGAGCTGCTA	NA	False	NA	5	True	ATTAAA	-18	NA	103319312	103406369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.8	chr15	+	4798	32	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42894	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	4.21359970530981	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGATTGTGCGTGG	NA	False	NA	0	True	ATTAAA	-14	NA	103319326	103407227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319522_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ES.12959.9	chr15	+	4772	31	NNC	ENSMUSG00000022488.10	novel	4992	30	NA	NA	-42519	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	5.59255457431277	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGATGTTTGCTTTTTAT	NA	False	NA	15	True	ATTAAA	-29	NA	103319701	103407242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103319946_103337911_103337955_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103405838
ES.1296.1	chr1	-	206	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	131840991	131840785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131840800_131841000
ES.12960.1	chr15	-	1253	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-20	-533	10	424	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTGAGATATCTTATG	8433	False	NA	NA	False	AATAAA	-40	NA	103338826	103310407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
ES.12960.2	chr15	-	788	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	-29	-59	1	3	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTACTTTTTTTTTTTA	8424	False	NA	4	True	AGTAAA	-22	NA	103338835	103310881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
ES.12960.3	chr15	-	650	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	42.0432236283236	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCAAGTACTTTTTT	8430	False	NA	-2	True	AGTAAA	-16	NA	103338829	103310887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103338782
ES.12960.4	chr15	-	394	4	NNC	ENSMUSG00000022487.15	novel	698	9	NA	NA	16581	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	54.9565484926248	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCAAGTACTTTTTT	3184	False	NA	-2	True	AGTAAA	-16	NA	103320346	103310887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103310986_103313235_103313270_103318050_103318146_103320179
ES.12960.5	chr15	-	726	9	NNC	ENSMUSG00000022487.15	novel	819	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	39.8526583178588	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCAAGTACTTTTTT	8421	False	NA	-2	True	AGTAAA	-16	NA	103338838	103310887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328471_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
ES.12960.6	chr15	-	595	8	NIC	ENSMUSG00000022487.15	novel	819	9	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	42.4446818860521	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCAAGTACTTTTTT	8429	False	NA	-2	True	AGTAAA	-16	NA	103338830	103310887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103336766_103336812_103338782
ES.12960.7	chr15	-	681	9	FSM	ENSMUSG00000022487.15	ENSMUST00000023129.15	819	9	80	58	-11	-2	multi-exon	FALSE	canonical	3	70	junction_8	17.7019596372831	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTGGCAAGTACTTTT	8442	False	NA	-4	True	AGTAAA	-14	NA	103338817	103310889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338782
ES.12960.8	chr15	-	378	1	Intergenic	novelGene_10801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACACATTTACTTAAAT	9350	False	NA	NA	False	TTTAAA	-4	NA	103314180	103313802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103313800_103314200
ES.12960.9	chr15	-	226	1	Intergenic	novelGene_10802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCTAGCACCTATATCAA	9348	False	NA	NA	False	NA	NA	NA	103314182	103313956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103314000_103314200
ES.12961.1	chr15	-	201	1	Intergenic	novelGene_10803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTTTTTCTAGTTTG	7087	False	NA	NA	False	NA	NA	NA	103346683	103346482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103346500_103346700
ES.12962.1	chr15	+	3350	16	FSM	ENSMUSG00000022489.7	ENSMUST00000023132.5	3218	16	-128	-4	-128	4	multi-exon	FALSE	canonical	2	9	junction_2	5.10163372525573	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTGTTCATTAGG	NA	False	NA	13	True	AATAAA	-19	NA	103411332	103438483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
ES.12962.3	chr15	+	2930	15	NIC	ENSMUSG00000022489.7	novel	3218	16	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	6.71276578541185	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103411617	103438479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103436648_103436772_103437240
ES.12962.4	chr15	+	4358	13	NIC	ENSMUSG00000022489.7	novel	3258	15	NA	NA	-609	2	intron_retention	FALSE	canonical	2	3	junction_1	6.14353770685552	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGTGGTGTTCATTA	NA	False	NA	11	True	AATAAA	-17	NA	103422737	103438481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr15_+_103423849_103428375_103428490_103429732_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
ES.12962.5	chr15	+	3059	15	FSM	ENSMUSG00000022489.7	ENSMUST00000227955.2	3258	15	200	-1	200	1	multi-exon	FALSE	canonical	2	3	junction_1	6.01740672328781	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGTGTGGTGTTCATT	NA	False	NA	10	True	AATAAA	-16	NA	103423546	103438480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_+_103423849_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
ES.12962.6	chr15	+	3072	11	NNC	ENSMUSG00000022489.7	novel	923	3	NA	NA	-302	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.84178339323893	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103431842	103438479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_+_103432640_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
ES.12963.1	chr15	-	1239	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	3	64	3	-64	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCTTCTGCTGCTGA	2055	False	NA	NA	False	AATAGA	-19	NA	103446427	103438769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ES.12963.2	chr15	-	950	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-44	400	-44	15	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGCCTCAAGGTTTTC	2008	False	NA	NA	False	AATAGA	-22	NA	103446474	103439105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ES.12963.3	chr15	-	862	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	-116	560	-116	-145	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGCTTTTCTTCTTTCC	1936	False	NA	-37	True	GATAAA	-16	NA	103446546	103439265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ES.12963.4	chr15	-	867	7	NNC	ENSMUSG00000022490.8	novel	1306	7	NA	NA	18	-146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.2772652709081	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2079	False	NA	-38	True	GATAAA	-15	NA	103446403	103439266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr15_-_103439526_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ES.12964.1	chr15	-	3892	3	Intergenic	novelGene_10805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATATCTCATTCTTGG	NA	False	NA	NA	False	AATAAA	-12	NA	103615700	103605159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103608922_103614740_103614806_103615635
ES.12965.1	chr15	-	3075	1	Intergenic	novelGene_10806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAGAAACAATTCAAACAT	NA	False	NA	NA	False	NA	NA	NA	103938919	103935844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr15_-_103935800_103938900
ES.12966.1	chr16	+	838	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-451	-1634	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	3164324	3165162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_3164300_3165200
ES.12967.1	chr16	-	142	1	Intergenic	novelGene_10807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATAACCAGTCTTCT	NA	False	NA	NA	False	AATAAA	-3	NA	3171700	3171558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3171600_3171700
ES.12968.1	chr16	+	3414	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	-143	-30	-143	21	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTTGATGTGGTT	NA	False	NA	33	True	AATAAA	-42	NA	3561813	3568675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ES.12968.10	chr16	+	3245	6	NNC	ENSMUSG00000022529.12	novel	3241	6	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	47.3598986485402	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATAAATCTTTATT	NA	False	NA	10	True	AATAAA	-19	NA	3561984	3568652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566550
ES.12968.11	chr16	+	1444	2	NNC	ENSMUSG00000022529.12	novel	2452	2	NA	NA	916	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATGTATAAATCTTTA	2838	False	NA	8	True	AATAAA	-17	NA	3566666	3568650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3567725_3568264
ES.12968.2	chr16	+	4781	4	NIC	ENSMUSG00000022529.12	novel	3241	6	NA	NA	-6	2	intron_retention	FALSE	canonical	3	89	junction_1	69.8188131284589	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATGTATAAATCTTTA	NA	False	NA	8	True	AATAAA	-17	NA	3561950	3568650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3562632_3563640_3563822_3564285_3566130_3566575
ES.12968.3	chr16	+	2858	3	FSM	ENSMUSG00000022529.12	ENSMUST00000160923.2	1095	3	-263	-1500	4	0	multi-exon	FALSE	canonical	1	2	junction_1	125.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATGAATATGTATAAAT	NA	False	NA	3	True	AATAAA	-12	NA	3561960	3568645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3562632_3566012_3566130_3566575
ES.12968.4	chr16	+	4019	6	NNC	ENSMUSG00000022529.12	novel	3856	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.6244508851213	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATAAATCTTTATT	NA	False	NA	10	True	AATAAA	-19	NA	3561961	3568652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3565981_3566130_3566575
ES.12968.5	chr16	+	3985	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	-129	0	10	0	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3561966	3568654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ES.12968.6	chr16	+	3186	6	NNC	ENSMUSG00000022529.12	novel	3241	6	NA	NA	20	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	81.1122678760741	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGTATAAATCTTTAT	NA	False	NA	9	True	AATAAA	-18	NA	3561976	3568651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564718_3566012_3566130_3566575
ES.12968.7	chr16	+	3714	4	NIC	ENSMUSG00000022529.12	novel	3856	6	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	103.289237903407	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATAAATCTTTATT	NA	False	NA	10	True	AATAAA	-19	NA	3561980	3568652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3563377_3564634_3564759_3566012_3566130_3566575
ES.12968.8	chr16	+	3923	6	NNC	ENSMUSG00000022529.12	novel	3856	6	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	91.4032822167782	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATATGTATAAATCTT	NA	False	NA	6	True	AATAAA	-15	NA	3561981	3568648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564718_3566012_3566130_3566575
ES.12968.9	chr16	+	3038	5	NIC	ENSMUSG00000022529.12	novel	3241	6	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.6562881230313	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATGTATAAATCTTTA	NA	False	NA	8	True	AATAAA	-17	NA	3561983	3568650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3562632_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ES.12969.1	chr16	-	4765	2	Antisense	novelGene_ENSMUSG00000022529.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCCCCCAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3570837	3565626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_3566127_3566572
ES.1297.1	chr1	-	711	1	Antisense	novelGene_ENSMUSG00000026434.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCCCATCTTCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	131863312	131862601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_131862600_131863300
ES.12970.1	chr16	-	2637	1	Intergenic	novelGene_10808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAAGGATGT	NA	False	NA	NA	False	NA	NA	NA	3579151	3576514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3576500_3579200
ES.12971.1	chr16	+	3267	1	Genic_Genomic	ENSMUSG00000118410.2	novel	NA	NA	NA	NA	-2632	-1412	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTATGCCGGACAGT	NA	False	NA	NA	False	NA	NA	NA	3590011	3593278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_3590000_3593300
ES.12972.1	chr16	+	1757	1	Intergenic	novelGene_10809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATATTGATTGGATT	NA	False	NA	NA	False	AAAACA	-41	NA	3598676	3600433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3598700_3600400
ES.12973.1	chr16	+	179	2	Intergenic	novelGene_10810	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTCCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	3607532	3607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3607554_3607808
ES.12973.2	chr16	+	195	1	Intergenic	novelGene_10811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCCA	NA	False	NA	NA	False	NA	NA	NA	3607787	3607982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3607800_3608000
ES.12974.1	chr16	+	5066	3	FSM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	-59	890	-59	-890	multi-exon	FALSE	canonical	2	5	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTTTTTCCTGATG	NA	False	NA	NA	False	NA	NA	NA	3665072	3675854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3666139_3667214_3667435_3672074
ES.12974.2	chr16	+	5927	3	FSM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	-54	24	-54	-24	multi-exon	FALSE	canonical	2	5	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTATTGATTACTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	3665077	3676720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3666139_3667214_3667435_3672074
ES.12974.3	chr16	+	1916	2	ISM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	-44	8665	-44	-8665	5prime_fragment	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGCTCTGTGGGTAAAG	NA	False	NA	NA	False	NA	NA	NA	3665087	3668079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_3666139_3667214
ES.12975.1	chr16	+	3569	5	NNC	ENSMUSG00000005982.15	novel	719	5	NA	NA	87	0	intron_retention	FALSE	non_canonical	0	0	junction_1	70.4343666117613	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3690325	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3690446_3715114_3715245_3717735_3717833_3718506_3718744_3719648
ES.12975.10	chr16	+	4384	5	NNC	ENSMUSG00000005982.15	novel	869	4	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	65.6862809116181	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGTCTCTAGTTATT	NA	False	NA	36	True	AATAAA	-17	NA	3702523	3722631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3718744_3719648
ES.12975.11	chr16	+	2561	18	NNC	ENSMUSG00000093575.2	novel	1012	9	NA	NA	13	21628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.2939349650388	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	NA	False	NA	5	True	AATACA	-15	NA	3702524	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718556_3718744_3719648_3719990_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755149_3755246_3755422_3755479_3758631
ES.12975.13	chr16	+	2688	18	NNC	ENSMUSG00000093575.2	novel	1012	9	NA	NA	21	21628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.9899026631889	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	NA	False	NA	5	True	AATACA	-15	NA	3702532	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3722995_3723051_3723504_3723747_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.14	chr16	+	3105	6	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.7823102642283	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702532	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3720246
ES.12975.15	chr16	+	2694	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	3	332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGCTTCACTGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	3702534	3722966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3721329
ES.12975.16	chr16	+	2371	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.5190260210802	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702534	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3720000_3721329
ES.12975.17	chr16	+	1783	5	NIC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	65.6862809116181	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702534	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3721329
ES.12975.18	chr16	+	3526	5	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	64.0170875626188	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702544	3722634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718556_3718744_3719648
ES.12975.2	chr16	+	3746	6	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_5	58.7823102642283	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702490	3722634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648
ES.12975.21	chr16	+	1231	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-3	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAATGTCAGTTTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	3702573	3721542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3721329
ES.12975.24	chr16	+	3290	2	NIC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	5758	-7	intron_retention	FALSE	canonical	3	73	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTCATCCTGTCTCTAG	NA	False	NA	31	True	AATAAA	-12	NA	3717996	3722626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3719990_3721329
ES.12975.25	chr16	+	7264	10	NIC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-946	-5	intron_retention	FALSE	canonical	3	109	junction_4	16.1848885471588	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTCTTGGCTGCTATT	2124	False	NA	2	True	AATACA	-12	NA	3725718	3759006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3729427_3731148_3731234_3733286_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.26	chr16	+	1854	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	-77	2	-53	-2	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3017	False	NA	5	True	AATACA	-15	NA	3726611	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.27	chr16	+	1599	12	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.7189570983821	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTCTTGGCTGCTATT	3263	False	NA	2	True	AATACA	-12	NA	3726857	3759006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737423_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.28	chr16	+	1686	13	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	55.7585942553552	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3263	False	NA	5	True	AATACA	-15	NA	3726857	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755149_3755228_3755422_3755479_3758631
ES.12975.29	chr16	+	7576	10	NIC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	109	junction_5	17.6306411163304	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGCTGCTATTATTA	3263	False	NA	6	True	AATACA	-16	NA	3726857	3759010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3755479_3758631
ES.12975.3	chr16	+	2397	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.8141758178173	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702498	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3719990_3721329
ES.12975.30	chr16	+	556	3	FSM	ENSMUSG00000014232.15	ENSMUST00000137745.2	515	3	-41	0	-41	0	multi-exon	FALSE	canonical	3	128	junction_1	17.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTCTTTCGGAGTC	3267	False	NA	NA	False	AATAAA	-14	NA	3726861	3731436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3727018_3729314_3729427_3731148
ES.12975.31	chr16	+	5348	11	NIC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-41	-2	intron_retention	FALSE	canonical	3	109	junction_6	17.0047052312	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3267	False	NA	5	True	AATACA	-15	NA	3726861	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3755479_3758631
ES.12975.32	chr16	+	1689	13	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	55.4037578950101	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGGCTGCTATTATT	3278	False	NA	5	True	AATACA	-15	NA	3726872	3759009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755149_3755246_3755422_3755479_3758631
ES.12975.33	chr16	+	1581	12	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.2352084267066	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTGGCTGCTATTAT	3279	False	NA	4	True	AATACA	-14	NA	3726873	3759008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735780_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755426_3755479_3758631
ES.12975.34	chr16	+	1614	13	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.0092585073298	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGCTGCTATTATTA	3378	False	NA	6	True	AATACA	-16	NA	3726972	3759010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3727018_3729018_3729139_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.35	chr16	+	2982	9	NNC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	6912	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.4685000601069	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTGGCTGCTATTAT	3604	False	NA	4	True	AATACA	-14	NA	3733881	3759008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3735786_3737078_3737183_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ES.12975.36	chr16	+	6712	1	NIC	ENSMUSG00000014232.15	novel	1779	12	NA	NA	24069	-1261	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	3288	False	NA	NA	False	NA	NA	NA	3751038	3757750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3751000_3757800
ES.12975.4	chr16	+	3377	7	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.6578941845231	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGTCTCTAGTTATT	NA	False	NA	36	True	AATAAA	-17	NA	3702498	3722631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3713377_3713620_3715114_3715245_3717735_3717833_3718506_3718742_3720246
ES.12975.5	chr16	+	3066	6	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-20	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	60.9176493308795	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTCTAGTTATTG	NA	False	NA	37	True	AATAAA	-18	NA	3702502	3722632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3718744_3719648_3719990_3721329
ES.12975.6	chr16	+	2343	7	NNC	ENSMUSG00000005982.15	novel	1279	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.9805526463281	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702502	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718556_3718744_3719648_3719990_3721329
ES.12975.7	chr16	+	5308	4	FSM	ENSMUSG00000005982.15	ENSMUST00000140832.2	869	4	-69	-4370	-15	0	multi-exon	FALSE	canonical	3	141	junction_1	7.25718035235908	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702507	3722634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735
ES.12975.8	chr16	+	2279	6	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.6788640611809	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTAGTTATTGG	NA	False	NA	38	True	AATAAA	-19	NA	3702510	3722633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718744_3719648_3720000_3721329
ES.12975.9	chr16	+	3610	5	NNC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_4	66.3381489039301	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702510	3722634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718744_3719648
ES.12976.1	chr16	-	160	1	Intergenic	novelGene_10812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	3666556	3666396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3666400_3666600
ES.12977.1	chr16	-	3317	1	Genic_Genomic	ENSMUSG00000039789.8	novel	NA	NA	NA	NA	4190	3	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTTATGGTGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	3679498	3676181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_3676200_3679500
ES.12977.2	chr16	-	5713	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	24	-3895	24	133	multi-exon	FALSE	canonical	3	18	junction_2	4	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAGTATAAAGTTTCA	4414	False	NA	NA	False	GATAAA	-25	NA	3702401	3679258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3702151
ES.12977.3	chr16	-	5702	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	-12	-22	-12	22	multi-exon	FALSE	canonical	3	7	junction_2	9.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGCAGTAATGTAAATTT	NA	False	NA	37	True	AATATA	-17	NA	3690272	3679369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3689922
ES.12977.4	chr16	-	5615	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	-14	-3759	-14	-3	multi-exon	FALSE	canonical	3	18	junction_2	4	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATACTTCAAGAA	4376	False	NA	12	True	AATAAA	-30	NA	3702439	3679394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3702151
ES.12977.6	chr16	-	5386	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	16	-3560	16	-202	multi-exon	FALSE	canonical	3	18	junction_2	4	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTCTAGTTATCTTA	4406	False	NA	NA	False	AATAAA	-16	NA	3702409	3679593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3702151
ES.12977.7	chr16	-	4749	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	6	-2913	6	7	multi-exon	FALSE	canonical	3	18	junction_2	4	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATTTCTGATGCCAAC	4396	False	NA	3	True	AATAAA	-44	NA	3702419	3680240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3702151
ES.12977.8	chr16	-	4827	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	-12	853	-12	3	multi-exon	FALSE	canonical	3	7	junction_2	9.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTTATTTCTGATGC	NA	False	NA	-1	True	AATAAA	-40	NA	3690272	3680244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3689922
ES.12977.9	chr16	-	1487	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	31	324	-25	-324	multi-exon	FALSE	canonical	3	18	junction_2	4	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGCTCTTCAGTGTCT	4421	False	NA	NA	False	AGTAAA	-17	NA	3702394	3683477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3684595_3689013_3689141_3702151
ES.12978.1	chr16	-	7271	1	Genic_Genomic	ENSMUSG00000005983.16	novel	NA	NA	NA	NA	10693	5491	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGTGGTGGAGCACG	-3	True	NA	NA	False	NA	NA	NA	3714822	3707551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_3707600_3714800
ES.12979.1	chr16	-	157	1	Intergenic	novelGene_10813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3759227	3759070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3759100_3759200
ES.1298.1	chr1	-	2761	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGGTGGTGGCACAT	NA	False	NA	NA	False	NA	NA	NA	131867177	131864416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131864400_131867200
ES.12980.1	chr16	+	158	1	Intergenic	novelGene_10814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3791421	3791579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3791400_3791600
ES.12981.1	chr16	-	3816	15	NNC	ENSMUSG00000049871.15	novel	3842	15	NA	NA	-213	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.89616213324476	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCAGGCTGGAGCAAAA	NA	False	NA	NA	False	AATACA	-14	NA	3794709	3762816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3794572
ES.12981.10	chr16	-	2967	16	NNC	ENSMUSG00000049871.15	novel	3842	15	NA	NA	-8	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.82055944017416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGCAGGAGCTGGAC	NA	False	NA	NA	False	NA	NA	NA	3794417	3763465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764271_3764558_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3794192
ES.12981.11	chr16	-	5070	19	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.96273147243853	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGAGTATGCAGG	NA	False	NA	NA	False	NA	NA	NA	3794446	3763473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764300_3764582_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416_3783167_3783263_3783504_3794192
ES.12981.12	chr16	-	3422	19	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.00257091486037	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGAGTATGCAGG	NA	False	NA	NA	False	NA	NA	NA	3794450	3763473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3777451_3777556_3780317_3780405_3783263_3783504_3794192
ES.12981.13	chr16	-	1595	16	NIC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	0	-1062	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.86278807381118	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACTCAGCCAGAAGCTT	NA	False	NA	NA	False	AATATA	-23	NA	3794496	3765291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3794192
ES.12981.2	chr16	-	5663	18	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	4	37	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.02011709482198	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATCCTTAATTGTCT	NA	False	NA	NA	False	ATTAAA	-42	NA	3794492	3762833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3781416_3783167_3783263_3783504_3794192
ES.12981.3	chr16	-	3884	16	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	-214	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.86278807381118	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATGATCCTTAATTG	NA	False	NA	NA	False	ATTAAA	-39	NA	3794710	3762836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3794572
ES.12981.4	chr16	-	3496	16	NNC	ENSMUSG00000049871.15	novel	3842	15	NA	NA	-214	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.00813711271426	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTAACAATGAAATACAT	NA	False	NA	NA	False	ATTAAA	-27	NA	3794710	3762848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3794572
ES.12981.5	chr16	-	4061	19	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	6	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.09569593683445	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTAACAATGAAATACAT	NA	False	NA	NA	False	ATTAAA	-27	NA	3794490	3762848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767259_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3777451_3777556_3780317_3780405_3783263_3783504_3794192
ES.12981.6	chr16	-	3636	16	NNC	ENSMUSG00000049871.15	novel	3842	15	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82055944017416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	3794499	3762877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3794192
ES.12981.7	chr16	-	3723	17	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.00974978195863	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	3794482	3762877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3777451_3777556_3794192
ES.12981.8	chr16	-	4686	17	NNC	ENSMUSG00000049871.15	novel	5403	18	NA	NA	-615	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.95803989154981	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	3782686	3762877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3764291_3764579_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416
ES.12981.9	chr16	-	3333	15	FSM	ENSMUSG00000049871.15	ENSMUST00000180200.8	3842	15	-86	595	1	8	multi-exon	FALSE	canonical	0	0	junction_2	2.66209216479775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGCAGGAGCTGGAC	NA	False	NA	NA	False	NA	NA	NA	3794495	3763465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3794192
ES.12982.1	chr16	-	6890	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	14.6917966528566	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCGGGAACACACAGTGA	NA	False	NA	48	True	AATAAA	-36	NA	3821598	3796968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3820838
ES.12982.11	chr16	-	6442	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	14.7005668824936	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACACTCCTCTCTGAGA	NA	False	NA	25	True	AATAAA	-41	NA	3821659	3796991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805312_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ES.12982.12	chr16	-	6361	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	13.8573686775905	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACACTCCTCTCTGAGA	NA	False	NA	25	True	AATAAA	-41	NA	3821644	3796991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821390
ES.12982.13	chr16	-	3874	14	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	3	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.7466198141059	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3819541	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3805778_3805946_3806836_3806959_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816
ES.12982.14	chr16	-	1662	3	NIC	ENSMUSG00000039738.17	novel	1945	4	NA	NA	396	-16	intron_retention	FALSE	canonical	3	55	junction_1	1.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3799672	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798859_3799448
ES.12982.16	chr16	-	6161	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-56	-16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	14.6917966528566	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3821690	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821615
ES.12982.17	chr16	-	5923	4	FSM	ENSMUSG00000039738.17	ENSMUST00000145706.2	1945	4	-3994	16	-679	-16	multi-exon	FALSE	canonical	3	55	junction_1	1.69967317119759	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3804062	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448
ES.12982.18	chr16	-	8156	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	25	-16	intron_retention	FALSE	canonical	0	0	junction_4	24.0865107477194	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3821591	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802540_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3810771_3810890_3812571_3812785_3813557_3813742_3816981_3819543_3821560
ES.12982.19	chr16	-	5935	15	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-9	-16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	21.534618545922	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3821643	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805046_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821615
ES.12982.2	chr16	-	6202	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	9.12724858139991	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCTCTCTGAGAAAACC	NA	False	NA	30	True	AATAAA	-18	NA	3821685	3796986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ES.12982.20	chr16	-	6266	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	15	-16	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	13.6521874519149	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	4	True	AATAAA	-20	NA	3821601	3797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821421
ES.12982.23	chr16	-	11863	9	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	4	-17	intron_retention	FALSE	canonical	2	2	junction_6	18.1779399272855	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	NA	False	NA	3	True	AATAAA	-19	NA	3821630	3797013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3805041_3805778_3805946_3806836_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821595
ES.12982.24	chr16	-	6085	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-38	-94	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	9.12724858139991	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTCCTTGTGTGTT	NA	False	NA	-74	True	AAAACA	-22	NA	3821672	3797090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ES.12982.25	chr16	-	5965	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-9	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.9035417118065	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGAGTGTCCTTGTGTG	NA	False	NA	-76	True	AAAACA	-20	NA	3821643	3797092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819454_3821595
ES.12982.3	chr16	-	6900	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-11	0	intron_retention	FALSE	canonical	3	32	junction_11	8.90568495343261	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCTCTCTGAGAAAACC	NA	False	NA	30	True	AATAAA	-18	NA	3821645	3796986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ES.12982.4	chr16	-	4020	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	15.4259256990778	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCTCTCTGAGAAAACC	NA	False	NA	30	True	AATAAA	-18	NA	3821689	3796986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
ES.12982.5	chr16	-	5987	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	14.9829835452879	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCCTCTCTGAGAAAAC	NA	False	NA	29	True	AATAAA	-45	NA	3821655	3796987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821595
ES.12982.6	chr16	-	6645	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.3224972479513	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACACTCCTCTCTGAGAA	NA	False	NA	26	True	AATAAA	-42	NA	3819544	3796990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3800842_3801107_3802854_3805312_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816
ES.12982.7	chr16	-	5614	16	NNC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	14.9927389833286	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACACTCCTCTCTGAGAA	NA	False	NA	26	True	AATAAA	-42	NA	3821630	3796990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3819345_3819543_3821595
ES.12983.1	chr16	+	179	1	Intergenic	novelGene_10815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3835650	3835829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3835600_3835800
ES.12983.2	chr16	+	322	1	Intergenic	novelGene_10816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTCAACTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	3835652	3835974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3835700_3836000
ES.12984.1	chr16	+	2590	4	NNC	ENSMUSG00000005980.16	novel	2782	2	NA	NA	184	5138	intron_retention	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9013	False	NA	NA	False	AATGAA	-12	NA	3856269	3863026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_3858089_3858222_3858292_3861810_3861961_3862474
ES.12984.2	chr16	+	5072	2	NIC	ENSMUSG00000005980.16	novel	368	2	NA	NA	848	5159	intron_retention	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGGGTGCGAGGAGGA	NA	False	NA	NA	False	AATGAA	-33	NA	3857841	3863047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_3858089_3858222
ES.12985.1	chr16	+	182	1	Intergenic	novelGene_10817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	3867989	3868171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_3868000_3868200
ES.12986.1	chr16	+	2459	2	Antisense	novelGene_ENSMUSG00002076443.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAAAAAAGTCATGG	NA	False	NA	NA	False	NA	NA	NA	3872062	3875408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3872773_3873659
ES.12986.2	chr16	+	1051	1	Antisense	novelGene_ENSMUSG00000005981.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3872062	3873113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3872100_3873100
ES.12987.1	chr16	-	2183	17	Fusion	ENSMUSG00000084790.2_ENSMUSG00000005981.12	novel	431	5	NA	NA	-21	7	multi-exon	TRUE	canonical	0	0	junction_1	280.338348863922	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTCTCAAAATTGTGCA	NA	False	NA	NA	False	NA	NA	NA	3895660	3850695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_3850917_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.11	chr16	-	3189	17	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_7	297.29130679142	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895682	3857834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871210_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.12	chr16	-	2266	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.738409640077	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGACGTTTTCTCTGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	3895662	3857836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862540_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.13	chr16	-	3217	17	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	-2	intron_retention	FALSE	canonical	2	124	junction_2	262.331486089165	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGACGTTTTCTCTGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	3895691	3857836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861661_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.14	chr16	-	3450	17	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_16	365.791756843973	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGACGTTTTCTCTGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	3895648	3857836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861661_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895280
ES.12987.15	chr16	-	3631	14	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-16	-3	intron_retention	FALSE	canonical	0	0	junction_8	432.416192242623	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAGACGTTTTCTCTGT	NA	False	NA	-6	True	ATTAAA	-19	NA	3895655	3857837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895280
ES.12987.16	chr16	-	2450	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	288.46324719572	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCAGACGTTTTCTCTG	NA	False	NA	-7	True	ATTAAA	-18	NA	3895691	3857838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871210_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.17	chr16	-	3185	17	ISM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	7800	6	7748	-6	3prime_fragment	FALSE	canonical	3	963	junction_15	116.244354701637	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGGCAGACGTTTTCTC	7687	False	NA	-9	True	ATTAAA	-16	NA	3887891	3857840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720
ES.12987.18	chr16	-	3253	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-1	-6	intron_retention	FALSE	canonical	0	0	junction_15	294.145631182498	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGGCAGACGTTTTCTC	NA	False	NA	-9	True	ATTAAA	-16	NA	3895692	3857840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886526_3886886_3895556
ES.12987.19	chr16	-	2338	17	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	366.685273557243	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTGGCAGACGTTTTC	NA	False	NA	-11	True	ATTAAA	-14	NA	3895648	3857842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861661_3861963_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.2	chr16	-	2540	4	NNC	ENSMUSG00000084790.2	novel	565	3	NA	NA	-1586	0	intron_retention	FALSE	canonical	1	1	junction_3	1.69967317119759	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTGATTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	3857297	3850702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3850917_3852364_3852540_3854342_3854404_3855207
ES.12987.22	chr16	-	2123	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-21	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	296.625184365724	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895660	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.23	chr16	-	3369	16	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-10	-10	intron_retention	FALSE	canonical	0	0	junction_2	298.750390050884	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895649	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858355_3861816_3861963_3862476_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.24	chr16	-	2400	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-10	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	356.676663400527	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895649	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861661_3861963_3862476_3862540_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.25	chr16	-	2394	19	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	364.894272696782	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895662	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3859467_3859581_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.26	chr16	-	1123	10	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-24	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.483488352182	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895663	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3857899_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.27	chr16	-	3539	16	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-23	-10	intron_retention	FALSE	canonical	3	963	junction_13	116.262461697661	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895662	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858296_3861816_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.28	chr16	-	2990	16	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-19	-10	intron_retention	FALSE	canonical	1	32	junction_14	295.221649311534	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCGTGGCAGACGTTT	NA	False	NA	-13	True	ATTAAA	-12	NA	3895710	3857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886720_3886886_3895556
ES.12987.29	chr16	-	2333	18	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	200	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	289.243446989379	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCCCGTGGCAGACGTT	139	False	NA	-14	True	ATTAAA	-11	NA	3895439	3857845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895280
ES.12987.3	chr16	-	2398	1	NIC	ENSMUSG00000084790.2	novel	565	3	NA	NA	2283	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTGATTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	3853100	3850702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3850700_3853100
ES.12987.33	chr16	-	3001	15	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-9	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	420.337479816844	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGAGCTCAGCTTTAT	NA	False	NA	-23	True	AATACA	-17	NA	3895648	3857889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862866_3866339_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.34	chr16	-	2257	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	6	57	6	-57	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTGAGCTCAGCTTT	NA	False	NA	-25	True	AATACA	-15	NA	3895685	3857891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.37	chr16	-	2082	1	Intergenic	novelGene_10818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTCTTGGTCATGAT	4844	False	NA	NA	False	NA	NA	NA	3890734	3888652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3888700_3890700
ES.12987.4	chr16	-	2398	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	-5	-73	-5	73	multi-exon	FALSE	canonical	3	963	junction_15	112.803285922348	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGCAGTATGGCTGAAC	NA	False	NA	70	True	AATAGA	-23	NA	3895696	3857761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.5	chr16	-	2019	9	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-10083	1	intron_retention	FALSE	canonical	1	3	junction_4	405.797055188921	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACGTTTTCTCTGTTCTG	NA	False	NA	-2	True	ATTAAA	-23	NA	3872645	3857833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863469_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617
ES.12987.6	chr16	-	3066	17	NIC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	963	junction_14	113.904410993385	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895693	3857834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12987.7	chr16	-	3138	15	NNC	ENSMUSG00000005981.12	novel	2320	18	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_7	457.279494088993	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895660	3857834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3858089_3858222_3858296_3861661_3861963_3862476_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871210_3871466_3872617_3872774_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ES.12988.1	chr16	+	6559	31	Antisense	novelGene_ENSMUSG00000103937.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTCTTCTCTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	3903461	4031868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3904065_3905546_3905824_3906104_3906269_3909654_3909821_3910047_3910219_3911335_3911452_3912039_3912178_3912492_3912650_3913925_3913994_3914304_3914383_3917538_3917595_3919420_3919505_3925293_3925381_3925899_3926139_3926962_3927082_3932635_3932828_3933641_3933820_3935116_3935532_3936895_3937086_3937595_3937725_3942039_3942079_3942499_3942671_3943507_3943627_3944330_3944478_3944733_3944836_3946306_3946551_3955229_3955354_3956616_3956850_3972720_3972898_3997287_3997998_4031002
ES.12988.12	chr16	+	3534	16	Antisense	novelGene_ENSMUSG00000103937.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAAGTTTT	7237	False	NA	NA	False	NA	NA	NA	3933786	4031853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3933822_3935118_3935532_3936895_3937086_3937595_3937720_3942032_3942079_3942499_3942671_3943507_3943627_3944330_3944478_3944733_3944836_3946306_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002_4031198_4031347
ES.12988.13	chr16	+	10493	1	Intergenic	novelGene_10822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGGAAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	4018859	4029352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4018900_4029400
ES.12988.2	chr16	+	6590	31	Antisense	novelGene_ENSMUSG00000103937.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTCTTCTCTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	3903461	4031868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3904065_3905546_3905824_3906104_3906269_3909654_3909821_3910047_3910218_3911333_3911452_3912039_3912178_3912492_3912650_3913925_3913995_3914304_3914383_3917538_3917595_3919420_3919533_3925291_3925381_3925899_3926139_3926962_3927083_3932637_3932828_3933641_3933820_3935116_3935532_3936895_3937086_3937595_3937720_3942032_3942079_3942499_3942671_3943507_3943627_3944330_3944478_3944733_3944836_3946306_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12988.4	chr16	+	6560	31	Antisense	novelGene_ENSMUSG00000103937.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTCTTCTCTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	3903461	4031868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3904065_3905546_3905824_3906104_3906269_3909654_3909821_3910047_3910218_3911333_3911452_3912039_3912178_3912492_3912650_3913925_3913995_3914304_3914383_3917538_3917595_3919420_3919505_3925293_3925381_3925899_3926139_3926962_3927083_3932637_3932828_3933641_3933822_3935118_3935532_3936895_3937086_3937595_3937720_3942032_3942079_3942499_3942671_3943507_3943627_3944330_3944478_3944733_3944836_3946306_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12988.9	chr16	+	180	1	Antisense	novelGene_ENSMUSG00000022521.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	3904799	3904979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_3904800_3905000
ES.12989.10	chr16	-	9194	31	NIC	ENSMUSG00000022521.11	novel	10820	31	NA	NA	13	730	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	11.1277431075069	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGTCCTTCTTGAATTC	6025	False	NA	2	True	AATAAA	-21	NA	4031848	3900834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919533_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.13	chr16	-	2747	2	ISM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	125468	16	650	-16	3prime_fragment	FALSE	canonical	3	64	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGTTGGTTTAAAT	2853	False	NA	NA	False	AATATA	-11	NA	3905809	3901580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_3904063_3905544
ES.12989.14	chr16	-	5459	28	ISM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	13	10497	13	14	5prime_fragment	FALSE	canonical	3	32	junction_27	7.60459755529851	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGTACTGCAGCGAG	6025	False	NA	NA	False	AAGAAA	-42	NA	4031848	3909688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.15	chr16	-	5941	27	NIC	ENSMUSG00000022521.11	novel	10820	31	NA	NA	50	14	intron_retention	FALSE	canonical	3	32	junction_26	7.74940348916417	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGTACTGCAGCGAG	6062	False	NA	NA	False	AAGAAA	-42	NA	4031811	3909688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.16	chr16	-	176	1	Intergenic	novelGene_10819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAGCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	3913708	3913532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3913500_3913700
ES.12989.17	chr16	-	177	1	Intergenic	novelGene_10820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	3914718	3914541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3914500_3914700
ES.12989.18	chr16	-	4303	18	ISM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	36	26755	36	10950	5prime_fragment	FALSE	canonical	3	32	junction_17	6.35348581543395	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGACCCTGTCATGCAG	6048	False	NA	NA	False	AGTAAA	-23	NA	4031825	3925946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.19	chr16	-	182	1	Intergenic	novelGene_10821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGTTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3948852	3948670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_3948700_3948900
ES.12989.2	chr16	-	4037	2	NNC	ENSMUSG00000022521.11	novel	7749	30	NA	NA	3176	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGTTCCGATTGGCTA	5379	False	NA	0	True	AATAAA	-25	NA	3903283	3899193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3901826_3901878
ES.12989.20	chr16	-	2041	2	ISM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	-107	94774	-107	-59442	5prime_fragment	FALSE	canonical	3	32	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAAACTGGAGAGAGAA	6489	False	NA	NA	False	NA	NA	NA	4031384	3996338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_3997998_4031002
ES.12989.3	chr16	-	10793	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	13	14	13	-14	multi-exon	FALSE	canonical	3	32	junction_30	8.09416799649943	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGATTCAAAGATGGT	6025	False	NA	-12	True	AATAAA	-13	NA	4031848	3899205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.4	chr16	-	9479	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	-46	1387	-46	986	multi-exon	FALSE	canonical	3	32	junction_30	8.09416799649943	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGGTTCTGATTGTT	5966	False	NA	63	True	NA	NA	NA	4031907	3900578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.5	chr16	-	8626	30	NIC	ENSMUSG00000022521.11	novel	10820	31	NA	NA	13	902	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	11.4166576257519	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCTGTTCTTTAA	6025	False	NA	-21	True	TATAAA	-39	NA	4031848	3900662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_4031002
ES.12989.6	chr16	-	5541	16	NIC	ENSMUSG00000022521.11	novel	7749	30	NA	NA	11639	901	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	14.4215887551345	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTATTCTGTTCTTTA	NA	False	NA	-22	True	TATAAA	-38	NA	3932827	3900663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919533_3925291_3925381_3925899_3926140_3926963_3927083_3932637
ES.12989.8	chr16	-	9104	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	73	1643	73	730	multi-exon	FALSE	canonical	3	32	junction_30	8.09416799649943	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGTCCTTCTTGAATTC	6085	False	NA	2	True	AATAAA	-21	NA	4031788	3900834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ES.12989.9	chr16	-	7567	29	NNC	ENSMUSG00000022521.11	novel	7749	30	NA	NA	33945	730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	16.093318425955	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGTCCTTCTTGAATTC	6457	False	NA	2	True	AATAAA	-21	NA	3997332	3900834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919533_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937597_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3956608_3956850_3972720_3972898_3997287
ES.1299.1	chr1	+	3055	5	NNC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.3895116933639	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATATGTGTTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	131890643	131910702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131890791_131904455_131904638_131905150_131905937_131906485_131906752_131909028
ES.1299.10	chr1	+	4741	1	Genic_Genomic	ENSMUSG00000026435.16	novel	NA	NA	NA	NA	709	1444	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTTATGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	131907410	131912151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_131907400_131912200
ES.1299.2	chr1	+	3181	5	NNC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3674043852949	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATATGTGTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	131890664	131910701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131890768_131904455_131904851_131905192_131905937_131906485_131906752_131909028
ES.1299.3	chr1	+	3203	5	NNC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7931142241337	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATATGTGTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	131890684	131910701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131890768_131904455_131904851_131905150_131905937_131906485_131906752_131909028
ES.1299.4	chr1	+	3528	4	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	24	junction_3	2.94392028877595	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTCTTTTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	131890687	131910706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131890791_131904455_131905937_131906485_131906752_131909028
ES.1299.5	chr1	+	5504	4	ISM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-16	1	-16	-1	intron_retention	FALSE	canonical	3	29	junction_3	3.39934634239519	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTGTCTTTTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	131890688	131910706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485
ES.1299.6	chr1	+	3184	5	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.3895116933639	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTTTGTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	131890688	131910705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131890791_131904455_131904851_131905192_131905937_131906485_131906752_131909028
ES.1299.7	chr1	+	2954	4	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.2138486760204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATATGTGTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	131890690	131910701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131890791_131904455_131904851_131905150_131905937_131909028
ES.1299.8	chr1	+	3223	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	-14	3	-14	2	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTTTGTCTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	131890690	131910704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
ES.1299.9	chr1	+	3940	2	NNC	ENSMUSG00000026435.16	novel	798	2	NA	NA	-139	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGATATGTGTTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	131906562	131910700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131907660_131907857
ES.12990.1	chr16	+	4081	3	Antisense	novelGene_ENSMUSG00000005580.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCTTCCCGGAGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	4095658	4108763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4096071_4103311_4103633_4105415
ES.12990.2	chr16	+	4795	3	Antisense	novelGene_ENSMUSG00000005580.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCTCTTTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4095667	4109486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4096071_4103311_4103633_4105415
ES.12990.3	chr16	+	4259	4	Antisense	novelGene_ENSMUSG00000005580.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCTTCCCGGAGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	4095669	4108763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4096071_4096427_4096617_4103311_4103633_4105415
ES.12990.4	chr16	+	2668	3	Antisense	novelGene_ENSMUSG00000005580.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTCATCTGGGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	4095682	4107374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4096071_4103311_4103633_4105415
ES.12990.5	chr16	+	2148	3	Intergenic	novelGene_10823	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATCTCCCTCAAATGG	NA	False	NA	NA	False	NA	NA	NA	4095696	4104896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4096071_4096427_4096617_4103311
ES.12990.6	chr16	+	236	1	Intergenic	novelGene_10824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCCCAATGAATAGGG	NA	False	NA	NA	False	NA	NA	NA	4102190	4102426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4102200_4102400
ES.12991.1	chr16	+	2263	1	Intergenic	novelGene_10825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTAGGGCTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	4112737	4115000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4112700_4115000
ES.12992.1	chr16	+	3554	1	Intergenic	novelGene_10826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTGTCTTTATATGA	NA	False	NA	NA	False	NA	NA	NA	4117770	4121324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4117800_4121300
ES.12993.1	chr16	+	3896	1	Intergenic	novelGene_10828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	4165578	4169474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4165600_4169500
ES.12994.1	chr16	+	702	1	Intergenic	novelGene_10829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	4174031	4174733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4174000_4174700
ES.12995.1	chr16	-	7936	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-788	-2641	-98	2641	multi-exon	TRUE	canonical	2	3	junction_5	2.72763633939717	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTGCGTGGTATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	4238460	4102751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
ES.12995.2	chr16	-	5233	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	-679	-47	11	47	multi-exon	FALSE	canonical	2	3	junction_5	2.72763633939717	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGTTTTTTTTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	4238351	4105345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
ES.12995.3	chr16	-	4792	1	Genic_Genomic	ENSMUSG00000005580.12	novel	NA	NA	NA	NA	127279	12	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGTTAAAATACCATT	NA	False	NA	NA	False	NA	NA	NA	4110172	4105380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_4105400_4110200
ES.12995.5	chr16	-	172	1	Intergenic	novelGene_10827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGGAGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	4122001	4121829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4121800_4122000
ES.12995.6	chr16	-	3179	4	NNC	ENSMUSG00000005580.12	novel	4507	11	NA	NA	43	-32634	intron_retention	FALSE	canonical	0	0	junction_1	3.29983164553722	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTAGTCTGGTTGACTT	NA	False	NA	NA	False	AATAAA	-21	NA	4238319	4138042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4138615_4141630_4141822_4235716_4237453_4237639
ES.12996.1	chr16	-	175	1	Intergenic	novelGene_10830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	4292276	4292101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4292100_4292300
ES.12997.1	chr16	+	3563	3	Antisense	novelGene_ENSMUSG00000022519.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTATCTCTTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4293207	4301300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4294282_4295913_4296024_4298921
ES.12998.1	chr16	+	192	1	Intergenic	novelGene_10832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGAGGTAGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	4352339	4352531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4352300_4352500
ES.12999.1	chr16	-	7693	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	15	3955	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTACCTTTGTTGAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	4359663	4294124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.11	chr16	-	4533	6	ISM	ENSMUSG00000022519.15	ENSMUST00000023161.8	5000	7	25756	-12	25744	0	3prime_fragment	FALSE	canonical	0	0	junction_5	11.9498953970317	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	5527	False	NA	-3	True	AATAAA	-15	NA	4315183	4298079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4314268
ES.12999.12	chr16	-	3644	6	NNC	ENSMUSG00000022519.15	novel	3698	6	NA	NA	28949	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.9498953970317	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	8732	False	NA	-3	True	AATAAA	-15	NA	4311978	4298079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4311952
ES.12999.13	chr16	-	3807	6	NNC	ENSMUSG00000022519.15	novel	3698	6	NA	NA	27003	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	11.1821285987955	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	6786	False	NA	-3	True	AATAAA	-15	NA	4313924	4298079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4313735
ES.12999.14	chr16	-	1535	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	11	-2195	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTCAGAAGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	4359667	4300286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.15	chr16	-	4146	1	Intergenic	novelGene_10831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4334243	4330097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4330100_4334200
ES.12999.2	chr16	-	7008	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-15	3238	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTTGTGTCTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	4359695	4294841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.3	chr16	-	6553	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-7	2791	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTCTGATTATAGTT	NA	False	NA	NA	False	NA	NA	NA	4359687	4295288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.4	chr16	-	5131	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	17	1395	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGACTTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	4359661	4296684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.5	chr16	-	5082	6	NNC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	2	1395	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	11.5654658358408	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGACTTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	4359676	4296684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359607
ES.12999.6	chr16	-	3834	6	NIC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	-75	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	3.76297754444536	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGCCTTCTTGATTG	NA	False	NA	1	True	AATAAA	-19	NA	4359755	4298075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4359543
ES.12999.7	chr16	-	3753	6	NNC	ENSMUSG00000022519.15	novel	5000	7	NA	NA	26967	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	10.4192130221049	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGCCTTCTTGATTG	6750	False	NA	1	True	AATAAA	-19	NA	4313960	4298075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4313829
ES.12999.8	chr16	-	4030	6	NNC	ENSMUSG00000022519.15	novel	3698	6	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.9498953970317	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGCCTTCTTGATTG	NA	False	NA	1	True	AATAAA	-19	NA	4359676	4298075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311840_4359363
ES.13.1	chr1	-	1765	1	NIC	ENSMUSG00000033845.14	novel	1894	5	NA	NA	9591	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTTAAAACTCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	4845198	4843433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_4843400_4845200
ES.13.10	chr1	-	3056	6	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	8	132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	884.264304379635	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCTGAGTCCCTGGTC	1628	False	NA	-9	True	NA	NA	NA	4855954	4844526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844580_4844625_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.11	chr1	-	671	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	-7	1230	-7	0	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATCTGACCAGCAT	1642	False	NA	-18	True	NA	NA	NA	4855940	4844658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.12	chr1	-	2147	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	38	2018	-3	-793	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTAGAATGCTGGCCAG	1658	False	NA	NA	False	AATAAA	-21	NA	4855924	4845451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.13	chr1	-	1133	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	31	3039	2	127	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAACCTACTT	1651	False	NA	NA	False	NA	NA	NA	4855931	4846472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.14	chr1	-	1051	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	-9	3161	-9	5	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGGTCTTTTGTTCTT	1611	False	NA	-5	True	ATTAAA	-27	NA	4855971	4846594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.15	chr1	-	1711	4	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	23	3168	5	3	5prime_fragment	FALSE	canonical	3	2115	junction_1	94.2667609617633	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCAGGTCTTTTGTTC	1672	False	NA	-7	True	ATTAAA	-25	NA	4855910	4846596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.16	chr1	-	863	4	NIC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	2	24	junction_3	972.77621041818	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCAGGTCTTTTGTTC	1642	False	NA	-7	True	ATTAAA	-25	NA	4855940	4846596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_4847025_4847747_4847872_4852790_4852957_4855795
ES.13.17	chr1	-	2917	3	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	3450	-1	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_2	972	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTGCTCAGGTCTTTT	6243	False	NA	-11	True	ATTAAA	-21	NA	4851339	4846600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4847025_4847747_4847872_4848970
ES.13.18	chr1	-	956	5	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	928.393639573215	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTCACTGCTCAGGTC	1651	False	NA	-15	True	ATTAAA	-17	NA	4855931	4846604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855840
ES.13.19	chr1	-	3882	3	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	2	5937	2	824	5prime_fragment	FALSE	canonical	3	2269	junction_1	36	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAAATAAAATAAAAA	1651	False	NA	NA	False	NA	NA	NA	4855931	4849365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_4852957_4854173_4854329_4855795
ES.13.2	chr1	-	1910	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	-21	5	8	0	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTTAAAACTCTCCC	1628	False	NA	NA	False	AATAAA	-17	NA	4855954	4843433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.20	chr1	-	5088	1	FSM	ENSMUSG00000033845.14	ENSMUST00000192286.2	4600	1	304	-792	304	792	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3097	False	NA	NA	False	NA	NA	NA	4854485	4849397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4849400_4854500
ES.13.21	chr1	-	4992	3	Fusion	ENSMUSG00000102275.2_ENSMUSG00000033845.14	novel	1569	4	NA	NA	2	785	intron_retention	TRUE	non_canonical	0	0	junction_1	1170.5	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1651	False	NA	NA	False	NA	NA	NA	4855931	4849404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_4851870_4851937_4854329_4855795
ES.13.22	chr1	-	3775	4	Fusion	ENSMUSG00000102275.2_ENSMUSG00000033845.14	novel	1569	4	NA	NA	2	785	intron_retention	FALSE	non_canonical	0	0	junction_1	1086.98492272074	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1651	False	NA	NA	False	NA	NA	NA	4855931	4849404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_4851870_4851937_4852957_4854173_4854329_4855795
ES.13.23	chr1	-	2989	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	1	-1421	1	167	multi-exon	FALSE	canonical	3	20	junction_1	1077.56031024821	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGTCCATTGTCTTT	1621	False	NA	NA	False	AATAAA	-18	NA	4855961	4850022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ES.13.24	chr1	-	1514	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	31	24	2	-24	multi-exon	FALSE	canonical	3	20	junction_1	1077.56031024821	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTTTTTTTGATTT	1651	False	NA	NA	False	AATATA	-22	NA	4855931	4851467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ES.13.25	chr1	-	1022	5	NNC	ENSMUSG00000033845.14	novel	1569	4	NA	NA	2	-207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1152.03176497005	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAATAAAAATAA	1651	False	NA	-40	True	NA	NA	NA	4855931	4851650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4851861_4851928_4852284_4852790_4852957_4854173_4854329_4855795
ES.13.3	chr1	-	1841	6	NNC	ENSMUSG00000033845.14	novel	1894	5	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1066.39306074261	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTTAAAACTCTCCC	1651	False	NA	NA	False	AATAAA	-17	NA	4855931	4843433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844580_4844625_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.4	chr1	-	4160	6	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	884.264304379635	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTTAAAACTCTCCC	1617	False	NA	NA	False	AATAAA	-17	NA	4855965	4843433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844580_4844625_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.5	chr1	-	3425	6	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	13	507	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	884.264304379635	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTAGGGATTTTACTG	1633	False	NA	NA	False	TATAAA	-8	NA	4855949	4844151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844566_4844612_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.6	chr1	-	807	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	-7	1094	-7	136	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTCCCTGGTCTTTT	1642	False	NA	-5	True	NA	NA	NA	4855940	4844522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.7	chr1	-	769	6	NNC	ENSMUSG00000033845.14	novel	1894	5	NA	NA	9	133	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1066.39306074261	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTGAGTCCCTGGTCT	1629	False	NA	-8	True	NA	NA	NA	4855953	4844525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844565_4844612_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.8	chr1	-	1150	7	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	-7	133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1021.98006340633	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTGAGTCCCTGGTCT	1642	False	NA	-8	True	NA	NA	NA	4855940	4844525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844580_4844625_4844740_4846632_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.13.9	chr1	-	1188	6	NNC	ENSMUSG00000033845.14	novel	4203	5	NA	NA	1	133	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	854.470221833388	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTGAGTCCCTGGTCT	1650	False	NA	-8	True	NA	NA	NA	4855932	4844525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_4844740_4846632_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ES.130.1	chr1	+	5723	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATATATTCTAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	14271188	14276911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_14271200_14276900
ES.1300.1	chr1	-	157	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	3281	False	NA	NA	False	NA	NA	NA	131907854	131907697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131907700_131907900
ES.13000.1	chr16	+	3103	1	Antisense	novelGene_ENSMUSG00000005718.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	4365147	4368250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4365100_4368200
ES.13001.1	chr16	-	2207	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	39	1	39	-1	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTAGTTATTGAGGAT	NA	False	NA	-1	True	AATAAA	-21	NA	4377679	4362525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
ES.13001.2	chr16	-	5316	6	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	-2645	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	57.1923071750039	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTAGTTATTGAGGA	1520	False	NA	-2	True	AATAAA	-20	NA	4373471	4362526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4363612_4365118_4365275_4367199_4367336_4369093_4369265_4369609_4369705_4369798
ES.13001.3	chr16	-	1896	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	118	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	38.4953099596417	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	NA	False	NA	-3	True	AATAAA	-19	NA	4376529	4362527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4376450
ES.13001.4	chr16	-	1877	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	-902	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	41.7149719991383	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	NA	False	NA	-3	True	AATAAA	-19	NA	4378620	4362527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4378560
ES.13001.7	chr16	-	1878	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	-15666	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.2329691017408	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	NA	False	NA	-3	True	AATAAA	-19	NA	4393384	4362527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4393323
ES.13001.8	chr16	-	2390	7	NNC	ENSMUSG00000005718.9	novel	2247	7	NA	NA	2624	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	43.8726059809029	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	968	False	NA	-3	True	AATAAA	-19	NA	4374023	4362527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4373450
ES.13001.9	chr16	-	182	1	Intergenic	novelGene_10833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCTGTGTGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	4380171	4379989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4380000_4380200
ES.13002.1	chr16	-	176	1	Intergenic	novelGene_10834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAGAGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	4394704	4394528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4394500_4394700
ES.13003.1	chr16	+	175	1	Intergenic	novelGene_10835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4399021	4399196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4399000_4399200
ES.13004.1	chr16	-	228	1	Intergenic	novelGene_10836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCAGCACTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4402991	4402763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4402800_4403000
ES.13005.1	chr16	-	170	1	Intergenic	novelGene_10837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAATTAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	4407301	4407131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4407100_4407300
ES.13006.1	chr16	+	3785	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-169	3	-169	-3	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCAGGGCTGGGACACCT	NA	False	NA	33	True	AATAAA	-27	NA	4412407	4433818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.10	chr16	+	4659	6	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-1	219	intron_retention	FALSE	canonical	3	7	junction_5	39.422836021778	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATGTTAAAATCGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	4412575	4443007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429531_4429614_4429734_4439472
ES.13006.11	chr16	+	3684	6	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	65	junction_1	17.9599554565149	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGTTTCTGCACGTG	NA	False	NA	16	True	AATAAA	-10	NA	4412575	4433801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429734_4431249
ES.13006.12	chr16	+	3445	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	18	156	18	-141	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTATGGTTTTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4412594	4433665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.13	chr16	+	2012	6	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	18	3105	18	-804	5prime_fragment	FALSE	canonical	3	65	junction_1	17.8370401132026	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAAAACAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4412594	4430716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614
ES.13006.14	chr16	+	5829	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	18	2420	intron_retention	FALSE	non_canonical	0	0	junction_2	40.2602643916913	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAAGGTCTGTGTGTGGT	NA	False	NA	NA	False	AATATA	-16	NA	4412594	4436241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426505_4428135_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.15	chr16	+	1279	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	19	-1404	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	38.2259365120362	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATACCTTTAATCTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	4412595	4430116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4429865
ES.13006.16	chr16	+	3601	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	36	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.0222749241317	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCCAGGGCTGGGACAC	NA	False	NA	31	True	AATAAA	-25	NA	4412612	4433816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429376_4429531_4429611_4429734_4431249
ES.13006.17	chr16	+	5086	5	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	39	-2	intron_retention	FALSE	canonical	3	65	junction_1	19.9421037004625	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCTGCACGTGCCA	NA	False	NA	19	True	AATAAA	-13	NA	4412615	4433804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4412800_4426461_4428295_4429143_4429321_4429396_4429734_4431249
ES.13006.18	chr16	+	2035	5	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	49	3135	49	-834	intron_retention	FALSE	canonical	3	65	junction_1	19.9421037004625	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAAAAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	4412625	4430686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396
ES.13006.19	chr16	+	3727	5	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	58	6	intron_retention	FALSE	canonical	3	65	junction_1	19.2532464794902	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGACACCTGCTTTTGTT	NA	False	NA	42	True	AATAAA	-36	NA	4412634	4433827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429734_4431249
ES.13006.2	chr16	+	3906	8	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-137	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.4102367315856	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCACGTGCCAGGGC	NA	False	NA	23	True	AATAAA	-17	NA	4412439	4433808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4423703_4423867_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.20	chr16	+	3804	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	202	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0849791761896	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTGCACGTGCCAGG	NA	False	NA	21	True	AATAAA	-15	NA	4412778	4433806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4413202_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.21	chr16	+	3466	6	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	13798	17	-116	-2	3prime_fragment	FALSE	canonical	3	99	junction_4	5.85149553533112	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCTGCACGTGCCA	NA	False	NA	19	True	AATAAA	-13	NA	4426374	4433804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.22	chr16	+	5448	1	Genic_Genomic	ENSMUSG00000014303.14	novel	NA	NA	NA	NA	4023	-3826	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	4433514	4438962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_4433500_4439000
ES.13006.23	chr16	+	3808	1	Genic_Genomic	ENSMUSG00000014303.14	novel	NA	NA	NA	NA	4126	3604	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACACACAACTGGAT	NA	False	NA	NA	False	NA	NA	NA	4433617	4437425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_4433600_4437400
ES.13006.3	chr16	+	1912	8	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-25	219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.6856618289616	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATGTTAAAATCGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	4412551	4443007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4439404_4439571_4442333
ES.13006.4	chr16	+	6213	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-18	-2576	-18	2576	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCGAGTTCAGATCCCA	NA	False	NA	NA	False	NA	NA	NA	4412558	4436397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.6	chr16	+	1548	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	-2	2073	-2	228	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGGTTTCTCTCC	NA	False	NA	NA	False	GGGGCT	-12	NA	4412574	4431748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ES.13006.7	chr16	+	2932	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	39.9197110877989	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCTGCACGTGCCA	NA	False	NA	19	True	AATAAA	-13	NA	4412574	4433804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431921
ES.13006.8	chr16	+	3545	7	NNC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	37.2502796410085	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCACGTGCCAGGGC	NA	False	NA	23	True	AATAAA	-17	NA	4412574	4433808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429459_4429531_4429614_4429734_4431249
ES.13006.9	chr16	+	3682	6	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	65	junction_1	17.2348484182484	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTGCACGTGCCAGG	NA	False	NA	21	True	AATAAA	-15	NA	4412574	4433806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429531_4429614_4429734_4431249
ES.13007.1	chr16	+	4488	1	Antisense	novelGene_ENSMUSG00000039637.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4446428	4450916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4446400_4450900
ES.13008.1	chr16	+	177	1	Intergenic	novelGene_10838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	4455919	4456096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4455900_4456100
ES.13009.1	chr16	+	819	1	Intergenic	novelGene_10840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4497691	4498510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4497700_4498500
ES.13009.10	chr16	+	1853	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	38	757	-6	260	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAGTGTTGTGAAGT	NA	False	NA	14	True	ATTAAA	-31	NA	4501971	4524802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ES.13009.11	chr16	+	2511	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	250.262741933353	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501971	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514234_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.12	chr16	+	3200	10	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	681	junction_9	59.7546423631722	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501978	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.13	chr16	+	2469	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	250.550773297549	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501979	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517736_4519032_4519149_4520074_4520173_4524431
ES.13009.14	chr16	+	2663	13	NNC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	335.409534085654	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501980	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523062_4523135_4523707_4523825_4524431
ES.13009.15	chr16	+	2622	3	NNC	ENSMUSG00000004069.18	novel	1483	4	NA	NA	2	-2210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	400	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATAAT	NA	False	NA	NA	False	NA	NA	NA	4501980	4509899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502414_4505100_4505235_4507844
ES.13009.17	chr16	+	2326	10	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	261.025754370032	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTGGTCATTTCTTC	NA	False	NA	31	True	TTTAAA	-4	NA	4501981	4525555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.18	chr16	+	2270	10	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	5	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	257.968559669154	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501983	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.19	chr16	+	2341	10	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	6	-10	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	262.734809735812	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501984	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4519032_4519149_4520074_4520173_4524431
ES.13009.2	chr16	+	6130	11	NIC	ENSMUSG00000004069.18	novel	487	4	NA	NA	-4202	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	246.652711316945	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTGGTCATTTCTTC	NA	False	NA	31	True	TTTAAA	-4	NA	4497731	4525555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4501610_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.20	chr16	+	3610	12	NNC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	6	-10	intron_retention	FALSE	canonical	0	0	junction_9	344.51916426442	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501984	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523062_4523135_4523707_4523825_4524431
ES.13009.21	chr16	+	2517	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.707609015024	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501984	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520027_4520173_4524431
ES.13009.23	chr16	+	2720	13	NNC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	335.409534085654	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501989	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4522996_4523135_4523707_4523825_4524431
ES.13009.24	chr16	+	2463	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	251.766479103156	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501989	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515184_4517618_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.25	chr16	+	2455	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	250.842580117491	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4501989	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519042_4519149_4520074_4520173_4524431
ES.13009.26	chr16	+	5859	9	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	681	junction_8	63.0365717262606	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501989	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4512381_4514252_4514401_4515114_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.29	chr16	+	2198	7	ISM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	31	9185	12	4265	5prime_fragment	FALSE	canonical	3	774	junction_6	42.4408084539188	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGGGACTCAGGATGT	NA	False	NA	NA	False	NA	NA	NA	4501990	4516374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114
ES.13009.3	chr16	+	2541	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	-36	0	-10	0	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501923	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.30	chr16	+	2507	11	NIC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	325.351333176921	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501990	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ES.13009.33	chr16	+	5015	12	NNC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	93	0	intron_retention	FALSE	canonical	0	0	junction_9	347.591476752155	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4502071	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4517742_4519032_4519149_4520074_4520173_4523062_4523135_4523707_4523825_4524431
ES.13009.34	chr16	+	1804	1	NIC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	12592	4265	mono-exon	FALSE	NA	NA	NA	NA	NA	553	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGGGACTCAGGATGT	NA	False	NA	NA	False	NA	NA	NA	4514570	4516374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4514600_4516400
ES.13009.35	chr16	+	4227	2	ISM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	18792	0	18747	0	3prime_fragment	FALSE	canonical	3	195	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4520725	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4523825_4524431
ES.13009.36	chr16	+	4206	1	NIC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	19365	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAATTGTGGTCAT	NA	False	NA	25	True	NA	NA	NA	4521343	4525549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4521300_4525500
ES.13009.5	chr16	+	2627	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	21	0	-5	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501954	4525559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ES.13009.6	chr16	+	4933	10	NIC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	2	-3	intron_retention	FALSE	canonical	3	681	junction_9	59.9131058026003	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTGGTCATTTCTTCT	NA	False	NA	32	True	TTTAAA	-5	NA	4501961	4525556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.8	chr16	+	1757	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	12	736	-6	281	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTCCCTTTCTACCAA	NA	False	NA	35	True	NA	NA	NA	4501971	4524823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ES.13009.9	chr16	+	2415	3	ISM	ENSMUSG00000004069.18	ENSMUST00000138495.2	1483	4	-6	2221	-6	-2221	5prime_fragment	FALSE	canonical	3	800	junction_2	48	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATATATATAT	NA	False	NA	NA	False	NA	NA	NA	4501971	4509888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4502209_4505100_4505235_4507844
ES.1301.1	chr1	-	199	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	131913563	131913364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131913400_131913600
ES.13010.1	chr16	-	601	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	-7	2	-7	-2	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTCCTGTTTGAGAAG	NA	False	NA	-17	True	AATAAA	-26	NA	4442859	4434329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ES.13010.11	chr16	-	5254	24	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	4	947	intron_retention	FALSE	canonical	0	0	junction_7	39.5241545155634	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGTTCTCTTAAATAT	NA	False	NA	NA	False	AATAAA	-14	NA	4497573	4443049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448471_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4452162_4452295_4452452_4452907_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.12	chr16	-	5175	28	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-2	947	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	23.2681629572987	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGTTCTCTTAAATAT	NA	False	NA	NA	False	AATAAA	-14	NA	4497579	4443049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446925_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.13	chr16	-	5640	30	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3992	944	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	29.1979997034475	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTCTCTTAAA	7960	False	NA	NA	False	AATAAA	-11	NA	4501633	4443052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339_4501416_4501523
ES.13010.14	chr16	-	3638	12	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	582	944	intron_retention	FALSE	canonical	3	91	junction_7	7.71174911289036	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTCTCTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	4451141	4443052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118
ES.13010.15	chr16	-	4290	16	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-611	99	intron_retention	FALSE	canonical	2	3	junction_2	29.834357524319	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTAGTTTTGGTACT	NA	False	NA	NA	False	NA	NA	NA	4453516	4443897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4445913_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452
ES.13010.16	chr16	-	4350	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	45	-99	10	99	multi-exon	FALSE	canonical	3	90	junction_15	10.2195380265448	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTAGTTTTGGTACT	NA	False	NA	NA	False	NA	NA	NA	4497596	4443897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.17	chr16	-	4205	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	67	24	3	-24	multi-exon	FALSE	canonical	3	90	junction_15	10.2195380265448	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	4497574	4444020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.18	chr16	-	4128	27	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	-26	combination_of_known_splicesites	FALSE	canonical	2	2	junction_18	23.7019523326391	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	4497554	4444022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.19	chr16	-	4290	29	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-4228	494	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_28	22.0708506627994	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTGCTGCTCCACT	7724	False	NA	0	True	ATTAAA	-17	NA	4501869	4444746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
ES.13010.2	chr16	-	667	5	NNC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	540.407947757988	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTCCTGTTTGAGAAG	NA	False	NA	-17	True	AATAAA	-26	NA	4442778	4434329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4436015_4442714
ES.13010.20	chr16	-	2584	19	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-396	494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.0202703563314	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTGCTGCTCCACT	NA	False	NA	0	True	ATTAAA	-17	NA	4453301	4444746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445358_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450280_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247
ES.13010.21	chr16	-	3506	24	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-8120	494	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	24.7789470979229	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTGCTGCTCCACT	NA	False	NA	0	True	ATTAAA	-17	NA	4487906	4444746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4450690_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721
ES.13010.22	chr16	-	2908	16	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-219	493	intron_retention	FALSE	canonical	1	2	junction_4	30.1171047745297	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4453124	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446925_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452
ES.13010.23	chr16	-	3668	24	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3	493	intron_retention	TRUE	canonical	0	0	junction_12	44.0854986466783	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497580	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449994_4450082_4450170_4450276_4450386_4450690_4450908_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452772_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4493626_4493702_4494799_4494897_4497415
ES.13010.25	chr16	-	4172	18	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-1764	493	intron_retention	FALSE	canonical	2	3	junction_2	28.0959798377808	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4454669	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4445913_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452907_4453247
ES.13010.26	chr16	-	3343	27	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	14	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	23.8854514903823	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497592	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451266_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.27	chr16	-	3633	26	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	14	493	intron_retention	FALSE	canonical	1	1	junction_14	24.1002572600377	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497592	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451682_4452162_4452295_4452452_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.28	chr16	-	3593	29	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-10	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	30.6691320918168	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497587	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4488844_4488947_4493626_4493702_4494799_4494897_4497415
ES.13010.29	chr16	-	3776	23	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-7	493	intron_retention	FALSE	canonical	0	0	junction_9	34.1821808491399	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497549	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450212_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452907_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.30	chr16	-	5112	27	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-4211	493	intron_retention	FALSE	canonical	0	0	junction_1	35.9154373362382	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	7741	False	NA	-1	True	ATTAAA	-16	NA	4501852	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445358_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4450690_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
ES.13010.31	chr16	-	3695	28	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	14	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	23.6422815310729	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497592	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4453106_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.33	chr16	-	3325	26	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	493	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	32.0763090145983	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497554	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451682_4452162_4452295_4452452_4452546_4452625_4452772_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.34	chr16	-	3499	28	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	4	493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	23.6231269352784	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497573	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453325_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.35	chr16	-	3420	27	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	3	493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	24.0916949032983	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497574	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.36	chr16	-	3345	26	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	493	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	24.3476158997139	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497554	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.37	chr16	-	3365	27	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	23.7024516246263	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497554	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.38	chr16	-	4198	26	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	493	intron_retention	FALSE	canonical	0	0	junction_22	24.5161171477051	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	NA	False	NA	-1	True	ATTAAA	-16	NA	4497554	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488043_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.39	chr16	-	3916	30	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3963	493	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	29.1979997034475	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	7989	False	NA	-1	True	ATTAAA	-16	NA	4501604	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339_4501416_4501523
ES.13010.4	chr16	-	471	4	NIC	ENSMUSG00000014301.14	novel	596	5	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	586.024648704207	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGTTCCTGTTTGAGA	NA	False	NA	-19	True	AATAAA	-24	NA	4442816	4434331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4434498_4434676_4434743_4434989_4435127_4442714
ES.13010.40	chr16	-	3692	27	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3931	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.6936812879445	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	8021	False	NA	-1	True	ATTAAA	-16	NA	4501572	4444747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
ES.13010.42	chr16	-	4529	24	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	8	492	intron_retention	FALSE	non_canonical	0	0	junction_23	25.4569580031678	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCTTGTGCTGCTCCA	NA	False	NA	-2	True	ATTAAA	-15	NA	4497569	4444748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494892_4497415
ES.13010.43	chr16	-	6020	21	NIC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	3	491	intron_retention	FALSE	canonical	3	102	junction_12	8.26120451266037	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTTGTGCTGCTCC	NA	False	NA	-3	True	ATTAAA	-14	NA	4497574	4444749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4449994_4450082_4450170_4450276_4451702_4452162_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.44	chr16	-	3581	29	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-12	491	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	30.5521259155428	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTTGTGCTGCTCC	NA	False	NA	-3	True	ATTAAA	-14	NA	4497589	4444749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472177_4472268_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.47	chr16	-	3235	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	65	996	1	248	multi-exon	FALSE	canonical	3	90	junction_15	10.2195380265448	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGCTGTCTTGCCTA	NA	False	NA	NA	False	NA	NA	NA	4497576	4444992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.48	chr16	-	1115	10	FSM	ENSMUSG00000039637.16	ENSMUST00000090480.6	1150	10	35	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.6029749853448	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAAGAGAAATGCCTGC	NA	False	NA	NA	False	ACTAAA	-19	NA	4497606	4470426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4470626_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.49	chr16	-	1689	10	NNC	ENSMUSG00000039637.16	novel	1150	10	NA	NA	-3998	-2223	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	34.7467024814346	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTCCTGGTCGTGGGCA	7954	False	NA	NA	False	NA	NA	NA	4501639	4472649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
ES.13010.5	chr16	-	4147	33	Fusion	ENSMUSG00000014301.14_ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3970	-5	multi-exon	TRUE	canonical	2	7	junction_32	335.880000893176	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATGTTCCTGTTTGAG	7982	False	NA	-20	True	AATAAA	-23	NA	4501611	4434332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4445084_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
ES.13010.50	chr16	-	827	9	ISM	ENSMUSG00000039637.16	ENSMUST00000090480.6	1150	10	68	2503	4	-2503	5prime_fragment	FALSE	canonical	3	104	junction_7	6.64736790015417	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCGGCTCTTCAGCAG	NA	False	NA	NA	False	NA	NA	NA	4497573	4472929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.51	chr16	-	173	1	Intergenic	novelGene_10839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4477741	4477568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4477600_4477700
ES.13010.52	chr16	-	1878	2	NNC	ENSMUSG00000039637.16	novel	610	3	NA	NA	-3992	-2892	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	7960	False	NA	NA	False	NA	NA	NA	4501633	4496271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4497856_4501339
ES.13010.6	chr16	-	6642	2	NIC	ENSMUSG00000014301.14	novel	471	4	NA	NA	1135	-10	intron_retention	FALSE	canonical	3	1178	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGCATATGTTCCTGT	NA	False	NA	-25	True	AATAAA	-18	NA	4441635	4434337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4435127_4435782
ES.13010.7	chr16	-	4383	33	Fusion	ENSMUSG00000014301.14_ENSMUSG00000039637.16	novel	4296	28	NA	NA	-4240	-11	intron_retention	FALSE	canonical	1	2	junction_32	337.323842916566	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACTGCATATGTTCCTG	7712	False	NA	-26	True	AATAAA	-17	NA	4501881	4434338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4445084_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339_4501416_4501523
ES.13010.8	chr16	-	3854	32	Fusion	ENSMUSG00000014301.14_ENSMUSG00000039637.16	novel	4296	28	NA	NA	0	-12	multi-exon	FALSE	canonical	0	0	junction_11	342.575390276203	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACTGCATATGTTCCT	NA	False	NA	-27	True	AATAAA	-16	NA	4497606	4434339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4445084_4445364_4445473_4445561_4445913_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448471_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ES.13010.9	chr16	-	5020	2	NIC	ENSMUSG00000014301.14	novel	471	4	NA	NA	2919	-12	intron_retention	FALSE	canonical	2	25	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACTGCATATGTTCCT	NA	False	NA	-27	True	AATAAA	-16	NA	4439851	4434339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4434498_4434989
ES.13011.1	chr16	-	3058	1	Antisense	novelGene_ENSMUSG00000004069.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTGTTTAAAAAAAAAGA	7634	False	NA	NA	False	NA	NA	NA	4515932	4512874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4512900_4515900
ES.13011.2	chr16	-	230	1	Intergenic	novelGene_10841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	8792	False	NA	NA	False	NA	NA	NA	4514774	4514544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4514500_4514800
ES.13012.1	chr16	-	3246	4	NIC	ENSMUSG00000063445.15	novel	1306	5	NA	NA	-7	18	intron_retention	FALSE	canonical	3	167	junction_3	9.79795897113271	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTGTCTGTGGGAAGT	4833	False	NA	12	True	AATAAA	-36	NA	4536983	4529162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
ES.13012.2	chr16	-	1238	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-46	1248	1	10	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAAGGCCTCTGTCTG	4797	False	NA	4	True	AATAAA	-28	NA	4537019	4529170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ES.13012.3	chr16	-	5434	2	FSM	ENSMUSG00000063445.15	ENSMUST00000125140.2	921	2	-7	-4506	1	-2	multi-exon	FALSE	canonical	3	167	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTTTCCCAAAAGAAAA	4841	False	NA	-8	True	AATAAA	-16	NA	4536975	4529182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4534400_4536758
ES.13012.4	chr16	-	2237	4	ISM	ENSMUSG00000063445.15	ENSMUST00000115851.10	1306	5	52	976	0	2	5prime_fragment	FALSE	canonical	3	167	junction_3	9.79795897113271	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCCTTAATGGTTTT	4848	False	NA	NA	False	NA	NA	NA	4536968	4530156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4531695_4532280_4532531_4534160_4534400_4536758
ES.13012.5	chr16	-	2763	3	NIC	ENSMUSG00000063445.15	novel	1155	5	NA	NA	-7	1097	intron_retention	FALSE	canonical	3	167	junction_2	12	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGGCTAGGTTTTTTT	4833	False	NA	NA	False	NA	NA	NA	4536983	4531275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4531695_4532280_4534400_4536758
ES.13013.1	chr16	+	1228	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	9	493	9	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544235	4584113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ES.13013.2	chr16	+	1717	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	13	0	13	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCTGTGATTTTTCCT	NA	False	NA	9	True	CATAAA	-17	NA	4544239	4584606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ES.13013.3	chr16	+	6148	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	41	-4459	41	4459	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTTTCATCAGATGTC	NA	False	NA	NA	False	NA	NA	NA	4544267	4589065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ES.13013.4	chr16	+	1059	5	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	47	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_4	161.425679493691	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTCTGCCTAACAGC	NA	False	NA	10	True	AATAAA	-11	NA	4544273	4584109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583841
ES.13013.6	chr16	+	1281	6	NIC	ENSMUSG00000004070.16	novel	1392	6	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	152.242438235861	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTCTGCCTAACAGCA	NA	False	NA	11	True	AATAAA	-12	NA	4574835	4584110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4574992_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ES.13013.7	chr16	+	2497	1	Antisense	novelGene_ENSMUSG00000004071.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACACT	NA	False	NA	NA	False	NA	NA	NA	4588850	4591347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4588800_4591300
ES.13014.1	chr16	-	230	1	Antisense	novelGene_ENSMUSG00000086944.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGACCCAGGTTCAG	1456	False	NA	NA	False	NA	NA	NA	4547965	4547735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4547700_4548000
ES.13015.1	chr16	-	5081	1	Antisense	novelGene_ENSMUSG00000004070.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAACTCACTCTGTAGAC	NA	False	NA	NA	False	NA	NA	NA	4562668	4557587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4557600_4562700
ES.13016.1	chr16	-	178	1	Intergenic	novelGene_10842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	4570617	4570439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4570400_4570600
ES.13017.1	chr16	-	7174	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	49	-3270	-6	3270	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTACATTTTTTAAAAAAAA	NA	False	NA	NA	False	CATAAA	-6	NA	4607805	4580054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.11	chr16	-	3876	5	ISM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	18095	-1	-685	1	3prime_fragment	FALSE	canonical	3	472	junction_2	15.2397506541282	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTATTTTAGACCATG	NA	False	NA	-13	True	AATAAA	-15	NA	4590061	4584703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534
ES.13017.12	chr16	-	3102	5	NIC	ENSMUSG00000004071.14	novel	2554	6	NA	NA	47	0	intron_retention	FALSE	canonical	3	30	junction_4	205.076814876768	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4608083	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.13	chr16	-	2471	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	191.140785809832	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607807	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4587961_4588534_4588600_4607694
ES.13017.14	chr16	-	2600	7	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	232.266190680722	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607791	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607239_4607330_4607694
ES.13017.15	chr16	-	2398	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.343983865053	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607796	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586766_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.16	chr16	-	2631	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.668165542444	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607858	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588654_4607694
ES.13017.17	chr16	-	2542	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	12	0	12	0	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4608144	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.18	chr16	-	3196	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	28	0	intron_retention	FALSE	canonical	1	2	junction_5	244.947831180437	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607766	4584704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607239_4607330_4607694
ES.13017.19	chr16	-	8744	4	FSM	ENSMUSG00000004071.14	ENSMUST00000140187.8	3811	4	-4935	2	-4935	-2	multi-exon	FALSE	canonical	3	492	junction_2	8.01387685344754	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTTCTATTTTAGACC	NA	False	NA	-16	True	AATAAA	-12	NA	4594311	4584706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534
ES.13017.2	chr16	-	7169	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	35	-4650	9	3270	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTACATTTTTTAAAAAAAA	NA	False	NA	NA	False	CATAAA	-6	NA	4608121	4580054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.20	chr16	-	2088	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	4	1861	4	17	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGGCTTCCTTCTTTT	NA	False	NA	-2	True	ATTAAA	-38	NA	4607850	4585185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.21	chr16	-	2752	4	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-5	11	intron_retention	FALSE	canonical	3	434	junction_3	32.1074584619974	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTGCCTGGCTTCCT	NA	False	NA	-8	True	ATTAAA	-32	NA	4607804	4585191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.22	chr16	-	2643	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-1	1	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCCTCTGCTGTCTTGC	NA	False	NA	-18	True	ATTAAA	-22	NA	4607800	4585201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.23	chr16	-	2011	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.668165542444	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4607889	4585202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607793
ES.13017.24	chr16	-	8755	4	FSM	ENSMUSG00000004071.14	ENSMUST00000140187.8	3811	4	-5442	498	-5442	0	multi-exon	FALSE	canonical	3	492	junction_2	8.01387685344754	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4594818	4585202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534
ES.13017.25	chr16	-	2083	7	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	232.266190680722	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGCCTCTGCTGTCTT	NA	False	NA	-20	True	ATTAAA	-20	NA	4607773	4585203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607239_4607330_4607694
ES.13017.26	chr16	-	1940	7	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.898934087647	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGCCTCTGCTGTCTT	NA	False	NA	-20	True	ATTAAA	-20	NA	4607795	4585203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4585763_4585837_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.27	chr16	-	2618	5	NIC	ENSMUSG00000004071.14	novel	2554	6	NA	NA	31	-2	intron_retention	FALSE	canonical	3	30	junction_4	205.076814876768	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCTCTGCTGTCT	NA	False	NA	-21	True	ATTAAA	-19	NA	4608099	4585204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.28	chr16	-	2057	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	-3	500	-3	-2	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCTCTGCTGTCT	NA	False	NA	-21	True	ATTAAA	-19	NA	4608159	4585204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.29	chr16	-	1613	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	52	2288	-3	-410	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTGTCTGTGCTATG	NA	False	NA	-1	True	AATGAA	-17	NA	4607802	4585612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.3	chr16	-	3849	6	FSM	ENSMUSG00000004071.14	ENSMUST00000117713.8	1964	6	-2	-1883	-2	5	multi-exon	FALSE	canonical	1	5	junction_2	194.363988434072	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTCTATACTAAGTA	NA	False	NA	2	True	TATAAA	-26	NA	4607796	4583319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586832_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.30	chr16	-	2251	5	NIC	ENSMUSG00000004071.14	novel	2554	6	NA	NA	-10	-410	intron_retention	FALSE	canonical	3	30	junction_4	205.076814876768	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTGTCTGTGCTATG	NA	False	NA	-1	True	AATGAA	-17	NA	4608140	4585612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.31	chr16	-	1785	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	51	-410	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	239.847117973096	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTGTCTGTGCTATG	NA	False	NA	-1	True	AATGAA	-17	NA	4607743	4585612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4587961_4588534_4588600_4607408
ES.13017.32	chr16	-	1649	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	8808	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.668165542444	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGTGTCTGTGCTAT	NA	False	NA	-2	True	AATGAA	-16	NA	4598986	4585613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4598841
ES.13017.33	chr16	-	4465	1	FSM	ENSMUSG00000004071.14	ENSMUST00000229452.2	4453	1	11	-23	6	23	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGACATGCTGCTCAG	NA	False	NA	NA	False	NA	NA	NA	4607788	4603323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4603300_4607800
ES.13017.34	chr16	-	1309	1	FSM	ENSMUSG00000004071.14	ENSMUST00000229452.2	4453	1	1340	1804	1335	-1804	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACTGTAGGACACAA	NA	False	NA	NA	False	NA	NA	NA	4606459	4605150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4605200_4606500
ES.13017.4	chr16	-	3908	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	50	-5	-5	5	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTCTATACTAAGTA	NA	False	NA	2	True	TATAAA	-26	NA	4607804	4583319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.5	chr16	-	3911	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	16	-1373	-10	-7	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCCAATGACTTTGGCT	NA	False	NA	-10	True	TATAAA	-14	NA	4608140	4583331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ES.13017.6	chr16	-	2624	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	-38	1367	-38	13	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCATGCATTGTTTAAAT	NA	False	NA	-1	True	AATAAA	-27	NA	4607892	4584691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.7	chr16	-	4414	5	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	-1231	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	215.592787448931	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGACCATGCATTGTT	NA	False	NA	-6	True	AATAAA	-22	NA	4590607	4584696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4586883_4587503_4587645_4587906_4588016_4588534
ES.13017.8	chr16	-	3193	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	3	2	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATTTTAGACCATGC	NA	False	NA	-12	True	AATAAA	-16	NA	4607851	4584702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
ES.13017.9	chr16	-	2774	6	NNC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	13	2	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	195.15593764987	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATTTTAGACCATGC	NA	False	NA	-12	True	AATAAA	-16	NA	4607781	4584702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4586514_4586608_4587155_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ES.13018.1	chr16	+	3126	1	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACTTGGTGTAAAAGCC	7779	False	NA	NA	False	NA	NA	NA	4692011	4695137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4692000_4695100
ES.13018.10	chr16	+	3119	16	NNC	ENSMUSG00000022517.18	novel	931	5	NA	NA	-1339	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.86283077655	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	1585	False	NA	14	True	AATAAA	-15	NA	4702773	4756160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4703022_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.13	chr16	+	3348	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-138	3	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGCCTTTGTTCTGG	2786	False	NA	17	True	AATAAA	-18	NA	4703974	4756163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.14	chr16	+	2117	16	NNC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-104	63	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	114.523049596528	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAGATGAAGGACAACA	2820	False	NA	1	True	AATATA	-11	NA	4704008	4755083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731559_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.15	chr16	+	3266	17	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-101	3	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGCCTTTGTTCTGG	2823	False	NA	17	True	AATAAA	-18	NA	4704011	4756163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.16	chr16	+	3197	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	-63	-39	-63	38	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCATTGTTGGCTTT	2861	False	NA	52	True	NA	NA	NA	4704049	4756198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.17	chr16	+	3125	17	NNC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-57	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	148.297723663413	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2867	False	NA	10	True	AATAAA	-11	NA	4704055	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738211_4740512_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.18	chr16	+	2275	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-55	918	-52	-43	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAACAGTGCCTGTCTG	2872	False	NA	NA	False	NA	NA	NA	4704060	4755242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.19	chr16	+	3329	16	NIC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	-45	185	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTGCTTGCTGTGTC	2879	False	NA	NA	False	NA	NA	NA	4704067	4756345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.2	chr16	+	1038	3	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGCCCCTGCTCCGGAG	9236	False	NA	NA	False	NA	NA	NA	4693468	4698192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4693736_4694226_4694286_4697480
ES.13018.20	chr16	+	2179	18	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-45	67	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	136.27729719254	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAAGGACAACAACTG	2879	False	NA	5	True	AATATA	-15	NA	4704067	4755087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.21	chr16	+	2912	15	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-45	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	146.405015526889	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2879	False	NA	10	True	AATAAA	-11	NA	4704067	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.22	chr16	+	2630	16	ISM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-47	3211	-44	-4	5prime_fragment	FALSE	canonical	3	137	junction_15	81.2343660172357	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACATGGTGGTACAT	2880	False	NA	NA	False	AATAAA	-2	NA	4704068	4752949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058
ES.13018.23	chr16	+	3182	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-44	0	-41	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2883	False	NA	14	True	AATAAA	-15	NA	4704071	4756160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.24	chr16	+	3071	15	NNC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	121.198290046535	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2887	False	NA	12	True	AATAAA	-13	NA	4704075	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4750080_4750163_4754759
ES.13018.27	chr16	+	5339	15	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	266	junction_14	53.1248049216106	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2900	False	NA	12	True	AATAAA	-13	NA	4704088	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.28	chr16	+	3852	17	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	144.649576563501	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2904	False	NA	10	True	AATAAA	-11	NA	4704092	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4747427_4748168_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.3	chr16	+	1324	2	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGACAGCCCCTGCTC	9436	False	NA	NA	False	NA	NA	NA	4693668	4698187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4694286_4697480
ES.13018.30	chr16	+	5204	18	Fusion	ENSMUSG00000022517.18_ENSMUSG00000022516.11	novel	3138	17	NA	NA	-20	6	intron_retention	FALSE	canonical	3	266	junction_15	65.917742595809	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGAGTGCCATGGCCA	2904	False	NA	18	True	AATAAA	-24	NA	4704092	4758889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759_4757158_4757241_4757503_4758059
ES.13018.31	chr16	+	3093	16	NNC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	114.910902683582	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2907	False	NA	10	True	AATAAA	-11	NA	4704095	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745750_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.32	chr16	+	5265	19	Fusion	ENSMUSG00000022517.18_ENSMUSG00000022516.11	novel	2519	17	NA	NA	-16	5	intron_retention	FALSE	canonical	3	83	junction_12	122.766062789516	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGAGTGCCATGGCC	2908	False	NA	17	True	AATAAA	-23	NA	4704096	4758888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759_4757158_4757241_4757503_4758059
ES.13018.33	chr16	+	2045	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	-16	1066	-16	73	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACAACAACTGTCTCCA	2908	False	NA	11	True	AATATA	-21	NA	4704096	4755093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.34	chr16	+	4842	16	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	83	junction_11	121.712667103031	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2909	False	NA	10	True	AATAAA	-11	NA	4704097	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.35	chr16	+	3048	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	127.59177960285	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2914	False	NA	10	True	AATAAA	-11	NA	4704102	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4752058_4752104_4754759
ES.13018.37	chr16	+	2968	16	NNC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	117.380672268573	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2919	False	NA	10	True	AATAAA	-11	NA	4704107	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740489_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.39	chr16	+	4466	16	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-5	0	intron_retention	FALSE	canonical	3	116	junction_11	92.4120242296543	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGTGTGCCTTTGTT	2919	False	NA	13	True	AATAAA	-14	NA	4704107	4756159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.4	chr16	+	4524	1	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCCCTGCTCCGGAGC	9437	False	NA	NA	False	NA	NA	NA	4693669	4698193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4693700_4698200
ES.13018.41	chr16	+	5796	16	ISM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	-2	0	1	0	intron_retention	FALSE	canonical	3	137	junction_15	81.2343660172357	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2925	False	NA	14	True	AATAAA	-15	NA	4704113	4756160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058
ES.13018.42	chr16	+	1868	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	2	1225	-1	-86	multi-exon	FALSE	canonical	3	266	junction_15	54.4223810169636	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCCCAGCGAGACCCTG	2926	False	NA	NA	False	NA	NA	NA	4704114	4754934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.43	chr16	+	3112	16	NIC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	169.28904932754	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTATGTGTGCCTTTG	2926	False	NA	11	True	AATAAA	-12	NA	4704114	4756157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.44	chr16	+	1936	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	0	-83	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCGAGACCCTGGCC	2927	False	NA	NA	False	NA	NA	NA	4704115	4754937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.46	chr16	+	5358	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	137	junction_14	101.171273920351	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2928	False	NA	14	True	AATAAA	-15	NA	4704116	4756160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.47	chr16	+	5847	19	Fusion	ENSMUSG00000022517.18_ENSMUSG00000022516.11	novel	3138	17	NA	NA	1	5	intron_retention	FALSE	canonical	3	83	junction_12	140.385975874452	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGAGTGCCATGGCC	2928	False	NA	17	True	AATAAA	-23	NA	4704116	4758888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759_4757158_4757241
ES.13018.49	chr16	+	2063	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	2	1073	2	67	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAAGGACAACAACTG	2929	False	NA	5	True	AATATA	-15	NA	4704117	4755087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.5	chr16	+	954	2	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9439	False	NA	NA	False	NA	NA	NA	4693671	4695116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4693736_4694226
ES.13018.50	chr16	+	3023	16	NIC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	161.464905027549	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2931	False	NA	10	True	AATAAA	-11	NA	4704119	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.51	chr16	+	3095	17	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	138.345793552786	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2931	False	NA	10	True	AATAAA	-11	NA	4704119	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740583_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.52	chr16	+	2976	16	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	162.79058121812	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2934	False	NA	10	True	AATAAA	-11	NA	4704122	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4750113_4750163_4752058_4752104_4754759
ES.13018.53	chr16	+	5072	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	7	-3	intron_retention	FALSE	canonical	3	137	junction_14	103.862644338034	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2934	False	NA	10	True	AATAAA	-11	NA	4704122	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.54	chr16	+	3160	18	NNC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	170.24541617942	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2935	False	NA	10	True	AATAAA	-11	NA	4704123	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740583_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.56	chr16	+	3478	16	NNC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.86283077655	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2936	False	NA	12	True	AATAAA	-13	NA	4704124	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704731_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.57	chr16	+	3076	16	NNC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	114.523049596528	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2936	False	NA	12	True	AATAAA	-13	NA	4704124	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731559_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.58	chr16	+	2983	15	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_14	114.532256395751	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2936	False	NA	12	True	AATAAA	-13	NA	4704124	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4754759
ES.13018.59	chr16	+	2775	6	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	-123	17246	-5	2024	intron_retention	FALSE	canonical	3	421	junction_5	21.5684955432687	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTTGGATATAGTAA	2938	False	NA	NA	False	NA	NA	NA	4704126	4735707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616
ES.13018.6	chr16	+	4030	2	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGCCCCTGCTCCGGAG	9439	False	NA	NA	False	NA	NA	NA	4693671	4698192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4693736_4694226
ES.13018.60	chr16	+	1663	13	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-5	63	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	157.372876386696	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAGATGAAGGACAACA	2938	False	NA	1	True	AATATA	-11	NA	4704126	4755083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.61	chr16	+	3136	17	NNC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	146.00266211186	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2940	False	NA	10	True	AATAAA	-11	NA	4704128	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731559_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.62	chr16	+	3245	17	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	146.861422244747	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2940	False	NA	10	True	AATAAA	-11	NA	4704128	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733187_4733357_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.63	chr16	+	5021	15	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	266	junction_14	56.323047807143	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTATGTGTGCCTTTG	2941	False	NA	11	True	AATAAA	-12	NA	4704129	4756157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.64	chr16	+	3238	19	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	164.379050435943	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2941	False	NA	10	True	AATAAA	-11	NA	4704129	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4744363_4744416_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.65	chr16	+	7246	14	NIC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	40	junction_1	111.075751112505	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2941	False	NA	12	True	AATAAA	-13	NA	4704129	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.66	chr16	+	3199	18	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	147.155873858547	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTATGTGTGCCTTTGT	2944	False	NA	12	True	AATAAA	-13	NA	4704132	4756158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745524_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.67	chr16	+	4753	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	4	64	intron_retention	FALSE	canonical	3	137	junction_14	103.997435865826	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGATGAAGGACAACAA	2947	False	NA	2	True	AATATA	-12	NA	4704135	4755084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.68	chr16	+	5168	17	NNC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	146.301793713372	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2950	False	NA	10	True	AATAAA	-11	NA	4704138	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4731369_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.69	chr16	+	4640	1	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	10	-24902	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTAAGCTCACAGATTC	2953	False	NA	NA	False	NA	NA	NA	4704141	4708781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704100_4708800
ES.13018.7	chr16	+	3615	18	NNC	ENSMUSG00000022517.18	novel	931	5	NA	NA	-6312	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	157.025200190319	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	NA	False	NA	10	True	AATAAA	-11	NA	4697800	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4698438_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.70	chr16	+	2964	17	NNC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	137.973729383532	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2953	False	NA	10	True	AATAAA	-11	NA	4704141	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745682_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.71	chr16	+	2060	17	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	10	67	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	118.010592744889	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAAGGACAACAACTG	2953	False	NA	5	True	AATATA	-15	NA	4704141	4755087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.72	chr16	+	5194	19	Fusion	ENSMUSG00000022517.18_ENSMUSG00000022516.11	novel	3138	17	NA	NA	11	1	intron_retention	FALSE	canonical	3	137	junction_15	106.652603239573	631	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	2954	False	NA	13	True	AATAAA	-19	NA	4704142	4758884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759_4757158_4757241_4757503_4758059
ES.13018.74	chr16	+	3160	18	NNC	ENSMUSG00000022517.18	novel	2250	17	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	166.209606274707	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2964	False	NA	10	True	AATAAA	-11	NA	4704152	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731559_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ES.13018.75	chr16	+	2727	14	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	-1891	-3	combination_of_known_junctions	FALSE	canonical	3	83	junction_9	124.246748198373	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2777	False	NA	10	True	AATAAA	-11	NA	4729183	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.76	chr16	+	4477	10	NIC	ENSMUSG00000022517.18	novel	3095	16	NA	NA	350	-2	intron_retention	FALSE	canonical	0	0	junction_5	138.522717306139	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTATGTGTGCCTTTG	208	False	NA	11	True	AATAAA	-12	NA	4731424	4756157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.77	chr16	+	2462	12	NIC	ENSMUSG00000022517.18	novel	2519	17	NA	NA	288	-3	combination_of_known_junctions	FALSE	canonical	3	83	junction_7	127.774271521343	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	2398	False	NA	10	True	AATAAA	-11	NA	4733614	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.78	chr16	+	4276	1	Genic_Genomic	ENSMUSG00000022517.18_ENSMUSG00000022516.11	novel	NA	NA	NA	NA	-2016	1	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	NA	False	NA	13	True	AATAAA	-19	NA	4754608	4758884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_4754600_4758900
ES.13018.79	chr16	+	1290	3	NNC	ENSMUSG00000022516.11	novel	1618	3	NA	NA	-28	1	intron_retention	FALSE	canonical	3	60	junction_1	233.5	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	67	False	NA	13	True	AATAAA	-19	NA	4756947	4758884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4757158_4757247_4757503_4758059
ES.13018.8	chr16	+	2825	16	NNC	ENSMUSG00000022517.18	novel	931	5	NA	NA	-5626	77	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	115.86283077655	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAACTGTCTCCATGGG	NA	False	NA	15	True	AATATA	-25	NA	4698486	4755097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4699504_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13018.80	chr16	+	4800	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	351	-3533	0	3520	multi-exon	FALSE	canonical	3	527	junction_2	18	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAATTTTTCAATCATCT	95	False	NA	NA	False	AATACA	-20	NA	4756975	4762416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4757158_4757241_4757503_4758059
ES.13018.81	chr16	+	1098	4	NNC	ENSMUSG00000022516.11	novel	1162	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	55	junction_3	231.455299260042	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	113	False	NA	13	True	AATAAA	-19	NA	4756993	4758884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4757158_4757241_4757503_4758059_4758180_4758331
ES.13018.9	chr16	+	3059	16	NNC	ENSMUSG00000022517.18	novel	931	5	NA	NA	-1759	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	115.640746375238	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTATGTGTGCCTTT	1165	False	NA	10	True	AATAAA	-11	NA	4702353	4756156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4702546_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ES.13019.1	chr16	-	3300	1	Antisense	novelGene_ENSMUSG00000022518.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTCCAGGTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	4686308	4683008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4683000_4686300
ES.13019.10	chr16	-	4813	2	NNC	ENSMUSG00000039568.7	novel	4749	2	NA	NA	-61	4	intron_retention	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	108	False	NA	-7	True	NA	NA	NA	4697730	4692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4692962_4693231
ES.13019.11	chr16	-	1726	4	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	-152	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.605142932464	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCAGGCTCTGTAGTCT	NA	False	NA	-9	True	NA	NA	NA	4698331	4692649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4692968_4693236_4693734_4694225_4694286_4697480
ES.13019.2	chr16	-	3934	1	Intergenic	novelGene_10843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCAGCAGCTGCAGC	7663	False	NA	NA	False	NA	NA	NA	4690175	4686241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4686200_4690200
ES.13019.3	chr16	-	4300	2	NNC	ENSMUSG00000039568.7	novel	4749	2	NA	NA	4331	6376	intron_retention	TRUE	canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	4500	False	NA	NA	False	NA	NA	NA	4693338	4686265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4689197_4691969
ES.13019.4	chr16	-	1919	4	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	-82	5946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.462986797652	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGGAAGTGTAGCTC	87	False	NA	NA	False	ATTAAA	-15	NA	4697751	4686695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4688144_4688384_4688525_4694225_4694286_4697480
ES.13019.5	chr16	-	2715	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-161	-703	-161	703	multi-exon	FALSE	canonical	3	334	junction_1	8.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTCTCTGTGTAGCC	NA	False	NA	NA	False	AATACA	-34	NA	4698340	4691938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4693734_4694225_4694286_4697480
ES.13019.6	chr16	-	2144	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-298	5	-298	-5	multi-exon	FALSE	canonical	3	334	junction_1	8.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCTGTAGTCTTGC	NA	False	NA	-6	True	NA	NA	NA	4698477	4692646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4693734_4694225_4694286_4697480
ES.13019.7	chr16	-	2478	2	NIC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	-140	-5	intron_retention	FALSE	canonical	3	351	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCTGTAGTCTTGC	NA	False	NA	-6	True	NA	NA	NA	4698319	4692646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4694286_4697480
ES.13019.8	chr16	-	1294	4	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	-55	4	intron_retention	FALSE	non_canonical	0	0	junction_1	161.605142932464	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	114	False	NA	-7	True	NA	NA	NA	4697724	4692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4693375_4693470_4693734_4694225_4694286_4697480
ES.13019.9	chr16	-	1818	3	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	-202	4	intron_retention	FALSE	canonical	3	6	junction_2	164	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	NA	False	NA	-7	True	NA	NA	NA	4698381	4692647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4693734_4694225_4694286_4697709
ES.1302.1	chr1	-	1862	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGATAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	131916013	131914151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131914200_131916000
ES.13020.1	chr16	-	344	1	Intergenic	novelGene_10844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7767	False	NA	NA	False	NA	NA	NA	4711389	4711045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4711000_4711400
ES.13020.2	chr16	-	238	1	Intergenic	novelGene_10845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGAACTTGGGAGGC	7765	False	NA	NA	False	NA	NA	NA	4711391	4711153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4711200_4711400
ES.13021.1	chr16	-	5994	2	Antisense	novelGene_ENSMUSG00000022517.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGTCTAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4733056	4726549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4728677_4729189
ES.13022.1	chr16	-	3304	3	FSM	ENSMUSG00000097397.3	ENSMUST00000181498.3	1694	3	26	-1636	26	1636	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCCTTAGGGCCATC	NA	False	NA	NA	False	AATAAA	-20	NA	4757471	4751276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4754047_4756731_4757029_4757234
ES.13023.1	chr16	-	2463	17	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	24.662408134649	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGTGATCACTTGACA	8197	False	NA	7	True	AATAAA	-25	NA	4782063	4759287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764071_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.10	chr16	-	2424	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	-22	-4	2	4	multi-exon	FALSE	canonical	3	59	junction_1	12.8608842522589	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8201	False	NA	-1	True	AATAAA	-17	NA	4782059	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.11	chr16	-	3302	13	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-878	3	intron_retention	FALSE	canonical	2	6	junction_11	36.9064131735032	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGCTCATTTGTGAT	NA	False	NA	-2	True	AATAAA	-16	NA	4776504	4759296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4774413_4774484_4775504
ES.13023.12	chr16	-	3523	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-6	2	intron_retention	FALSE	canonical	3	59	junction_1	13.1182654679988	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8185	False	NA	-3	True	AATAAA	-15	NA	4782075	4759297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.13	chr16	-	7023	9	NIC	ENSMUSG00000022515.7	novel	1779	11	NA	NA	-3	2	intron_retention	FALSE	canonical	3	5	junction_8	27.7927598485649	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8196	False	NA	-3	True	AATAAA	-15	NA	4782064	4759297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4781983
ES.13023.14	chr16	-	3287	18	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.3618957045584	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8197	False	NA	-3	True	AATAAA	-15	NA	4782063	4759297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764188_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4772023_4772741_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.15	chr16	-	5788	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-6	2	intron_retention	FALSE	canonical	3	18	junction_1	21.7519637962664	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGGGCTCATTTGTGA	8185	False	NA	-3	True	AATAAA	-15	NA	4782075	4759297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.16	chr16	-	3671	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	35	0	intron_retention	FALSE	canonical	3	59	junction_1	12.7038480430947	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8258	False	NA	-5	True	AATAAA	-13	NA	4782002	4759299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.18	chr16	-	5745	14	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	38.2344062656295	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8192	False	NA	-5	True	AATAAA	-13	NA	4782068	4759299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764097_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4778260
ES.13023.19	chr16	-	2891	16	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_2	21.6482999075883	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8192	False	NA	-5	True	AATAAA	-13	NA	4782068	4759299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.2	chr16	-	2244	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	6	5	combination_of_known_junctions	TRUE	canonical	3	5	junction_15	24.2840597008728	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCTCATTTGTGATCA	8210	False	NA	0	True	AATAAA	-18	NA	4782050	4759294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4781983
ES.13023.20	chr16	-	2841	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_6	30.8155308047016	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8218	False	NA	-5	True	AATAAA	-13	NA	4782042	4759299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4761422_4761565_4763918_4764188_4765128_4765297_4765512_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.21	chr16	-	3117	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	59	junction_1	10.8329146962545	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8202	False	NA	-5	True	AATAAA	-13	NA	4782058	4759299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.22	chr16	-	4781	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	18	junction_1	21.849133057964	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8184	False	NA	-7	True	AATAAA	-11	NA	4782076	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4778433_4781983
ES.13023.23	chr16	-	1930	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-3	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	27.1774793646391	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8196	False	NA	-7	True	AATAAA	-11	NA	4782064	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4781983
ES.13023.24	chr16	-	4307	2	ISM	ENSMUSG00000022515.7	ENSMUST00000230466.2	592	3	419	-1780	419	-2	3prime_fragment	FALSE	canonical	3	102	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	5817	False	NA	-7	True	AATAAA	-11	NA	4763915	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4761116_4761422
ES.13023.25	chr16	-	4308	16	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	5	-2	intron_retention	FALSE	canonical	3	17	junction_2	21.5792080999795	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8209	False	NA	-7	True	AATAAA	-11	NA	4782051	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.27	chr16	-	1620	12	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	37.7536599944324	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8207	False	NA	-7	True	AATAAA	-11	NA	4782053	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4761422_4761565_4763918_4764044_4765128_4765297_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
ES.13023.28	chr16	-	2052	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	24.9154693362356	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8196	False	NA	-7	True	AATAAA	-11	NA	4782064	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
ES.13023.3	chr16	-	3290	11	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	2	5	intron_retention	FALSE	canonical	1	1	junction_2	35.2194548509769	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGCTCATTTGTGATCA	8201	False	NA	0	True	AATAAA	-18	NA	4782059	4759294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4760159_4760556_4760643_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4781983
ES.13023.30	chr16	-	3547	15	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	30	-2	intron_retention	FALSE	canonical	3	17	junction_1	21.3498554217731	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8253	False	NA	-7	True	AATAAA	-11	NA	4782007	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.31	chr16	-	2492	18	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	31.6223389131655	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8192	False	NA	-7	True	AATAAA	-11	NA	4782068	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4774413_4774484_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.32	chr16	-	2336	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	20.4717691793683	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8194	False	NA	-7	True	AATAAA	-11	NA	4782066	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.33	chr16	-	5285	14	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	19	-2	intron_retention	FALSE	canonical	3	17	junction_2	23.113304654917	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8242	False	NA	-7	True	AATAAA	-11	NA	4782018	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759847_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4778433_4781983
ES.13023.34	chr16	-	1851	13	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.1271912726616	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8193	False	NA	-7	True	AATAAA	-11	NA	4782067	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4781983
ES.13023.35	chr16	-	3615	16	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_10	25.2054667791643	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGGGGGCTCATTT	8192	False	NA	-7	True	AATAAA	-11	NA	4782068	4759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771579_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.36	chr16	-	2492	11	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	72	-3	intron_retention	FALSE	canonical	3	18	junction_1	24.5652193151211	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGTGGGGGCTCATT	NA	False	NA	-8	True	AATAAA	-10	NA	4775554	4759302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504
ES.13023.38	chr16	-	8614	11	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	74	junction_10	10.0816665289028	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGTGGGGGCTCATT	8202	False	NA	-8	True	AATAAA	-10	NA	4782058	4759302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4760159_4760556_4760643_4760942_4761116_4761422_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4778433_4781983
ES.13023.39	chr16	-	3243	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	1	junction_3	29.0531037969558	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGTGGGGGCTCATT	8198	False	NA	-8	True	AATAAA	-10	NA	4782062	4759302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.4	chr16	-	2827	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-3	4	intron_retention	FALSE	canonical	3	59	junction_1	13.0018802059121	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8196	False	NA	-1	True	AATAAA	-17	NA	4782064	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.40	chr16	-	2521	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	70	junction_1	11.019175206077	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGGTGGGGGCTCAT	8197	False	NA	-9	True	AATAAA	-9	NA	4782063	4759303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.41	chr16	-	3286	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_13	26.3299317530914	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATTAGATGCAA	8201	False	NA	-25	True	NA	NA	NA	4782059	4759319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4778260_4778433_4781983
ES.13023.42	chr16	-	377	1	Intergenic	novelGene_10846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCATCTCTCTTGGAGC	2989	False	NA	NA	False	NA	NA	NA	4766743	4766366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4766400_4766700
ES.13023.43	chr16	-	228	1	Intergenic	novelGene_10847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCCAGATAACCTTTCA	2988	False	NA	NA	False	NA	NA	NA	4766744	4766516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4766500_4766700
ES.13023.44	chr16	-	1485	7	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	22	4289	-9	310	5prime_fragment	FALSE	canonical	3	74	junction_6	6.51707159867238	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTAAGTCAGTCTTT	8214	False	NA	NA	False	NA	NA	NA	4782046	4767921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.45	chr16	-	4840	2	NIC	ENSMUSG00000022515.7	novel	360	4	NA	NA	7	-798	intron_retention	FALSE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTGCTTTCTCAGAGA	8211	False	NA	NA	False	NA	NA	NA	4782049	4769029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4773804_4781983
ES.13023.46	chr16	-	3450	6	ISM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	-1	5397	0	-798	5prime_fragment	FALSE	canonical	3	74	junction_5	6.84105255059483	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTGCTTTCTCAGAGA	8191	False	NA	NA	False	NA	NA	NA	4782069	4769029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.47	chr16	-	5679	5	NIC	ENSMUSG00000022515.7	novel	1779	11	NA	NA	0	-798	intron_retention	FALSE	canonical	3	74	junction_4	6.87386354243376	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTGCTTTCTCAGAGA	8192	False	NA	NA	False	NA	NA	NA	4782068	4769029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4771819_4773721_4773804_4775504_4775627_4775831_4778433_4781983
ES.13023.48	chr16	-	7853	4	NIC	ENSMUSG00000022515.7	novel	360	4	NA	NA	-3	-798	intron_retention	FALSE	canonical	2	6	junction_1	31.1555238547945	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTGCTTTCTCAGAGA	8196	False	NA	NA	False	NA	NA	NA	4782064	4769029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4773804_4774413_4774484_4775504_4778433_4781983
ES.13023.49	chr16	-	3482	7	NIC	ENSMUSG00000022515.7	novel	1779	11	NA	NA	-1	-824	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.1188458428425	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	8203	False	NA	NA	False	NA	NA	NA	4782057	4769055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4771819_4773721_4773804_4774413_4774484_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.5	chr16	-	3777	13	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	4	intron_retention	FALSE	canonical	1	1	junction_2	38.006852452332	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8191	False	NA	-1	True	AATAAA	-17	NA	4782069	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759852_4760074_4760643_4761422_4761565_4763918_4765297_4765512_4765623_4768476_4768633_4771682_4771819_4773721_4773804_4774413_4774484_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.6	chr16	-	2976	9	NNC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-2	4	intron_retention	FALSE	canonical	0	0	junction_6	42.4970587217516	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8202	False	NA	-1	True	AATAAA	-17	NA	4782058	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4759662_4759762_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4766023_4766228_4768476_4768633_4781983
ES.13023.7	chr16	-	3241	14	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-10	4	intron_retention	FALSE	canonical	0	0	junction_12	31.7113460366415	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8181	False	NA	-1	True	AATAAA	-17	NA	4782079	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4778260_4778433_4781983
ES.13023.8	chr16	-	3811	13	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_1	27.0415061628519	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8193	False	NA	-1	True	AATAAA	-17	NA	4782067	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13023.9	chr16	-	3319	15	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	-5	4	intron_retention	FALSE	canonical	1	1	junction_4	23.712134153687	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCTCATTTGTGATC	8218	False	NA	-1	True	AATAAA	-17	NA	4782042	4759295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ES.13024.1	chr16	+	163	1	Intergenic	novelGene_10848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	4806503	4806666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4806500_4806700
ES.13025.1	chr16	-	194	1	Intergenic	novelGene_10849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTCTACGTCAGT	NA	False	NA	NA	False	NA	NA	NA	4818972	4818778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4818800_4819000
ES.13026.1	chr16	-	213	1	Intergenic	novelGene_10850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAAGAAAAAAAT	8087	False	NA	NA	False	NA	NA	NA	4821214	4821001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_4821000_4821200
ES.13027.1	chr16	+	347	4	NIC	ENSMUSG00000096215.9	novel	382	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	19.6694913225759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCGAGTCTGGACTGT	NA	False	NA	8	True	NA	NA	NA	4825171	4826170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4825190_4825607_4825753_4825835_4825919_4826069
ES.13027.2	chr16	+	407	4	NIC	ENSMUSG00000096215.9	novel	381	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	21.0765799460496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCGAGTCTGGACTGT	NA	False	NA	8	True	NA	NA	NA	4825174	4826170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4825283_4825637_4825753_4825835_4825919_4826069
ES.13027.3	chr16	+	423	4	FSM	ENSMUSG00000096215.9	ENSMUST00000185147.8	399	4	-27	3	9	0	multi-exon	FALSE	canonical	3	31	junction_1	9.41629792788369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCGAGTCTGGACTGT	NA	False	NA	8	True	NA	NA	NA	4825188	4826170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4825283_4825607_4825753_4825835_4825919_4826069
ES.13027.4	chr16	+	249	3	FSM	ENSMUSG00000096215.9	ENSMUST00000183477.8	247	3	-5	3	2	0	multi-exon	FALSE	canonical	3	10	junction_1	21.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCGAGTCTGGACTGT	NA	False	NA	8	True	NA	NA	NA	4825217	4826170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4825283_4825835_4825919_4826069
ES.13027.5	chr16	+	2342	1	Genic_Genomic	ENSMUSG00000106967.2_ENSMUSG00000096215.9	novel	NA	NA	NA	NA	164	1555	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGGCTCTAGGAGCC	NA	False	NA	NA	False	NA	NA	NA	4825386	4827728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_4825400_4827700
ES.13028.1	chr16	-	1652	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-47	-250	-11	250	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCGGCCTACCTCAGCCT	NA	False	NA	NA	False	NA	NA	NA	4831428	4826343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.10	chr16	-	1996	9	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	412	junction_5	51.6327173408489	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831428	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.11	chr16	-	1354	11	NNC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	196.808942886242	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831430	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4829557_4830104_4830160_4830294_4830374_4831166_4831239_4831326
ES.13028.12	chr16	-	1395	11	NNC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	153.723648148227	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831427	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828716_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.14	chr16	-	1869	9	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	6	junction_3	167.611157146534	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTCTGTCTGTCTGTC	NA	False	NA	-3	True	AATAAA	-17	NA	4831406	4826594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827871_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.16	chr16	-	1271	10	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	3	-1	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	156.342769990796	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTCTGTCTGTCTGTC	NA	False	NA	-3	True	AATAAA	-17	NA	4831397	4826594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.17	chr16	-	1148	9	NIC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	169.19473802397	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGTCTGTCTGTCTGT	NA	False	NA	-4	True	AATAAA	-16	NA	4831371	4826595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.19	chr16	-	1327	10	NNC	ENSMUSG00000022540.17	novel	1355	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	159.98873417128	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTGTCTGTCTGTCTG	NA	False	NA	-5	True	AATAAA	-15	NA	4831417	4826596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4827117_4827341_4827469_4827764_4827868_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.2	chr16	-	1432	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	-74	-3	-38	3	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGCC	NA	False	NA	1	True	AATAAA	-21	NA	4831455	4826590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.3	chr16	-	1952	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-12	1	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTGTCTGTCTGTCTG	NA	False	NA	-1	True	AATAAA	-19	NA	4831429	4826592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.4	chr16	-	2522	8	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	413	junction_4	46.9711157445266	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831406	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.5	chr16	-	2013	9	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	18	junction_6	163.836618312269	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831406	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4830374_4831166_4831239_4831326
ES.13028.7	chr16	-	1863	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	18	junction_6	156.103795795389	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831387	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ES.13028.8	chr16	-	2060	9	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	413	junction_6	44.8662944201992	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831407	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830374_4831166_4831239_4831326
ES.13028.9	chr16	-	2141	9	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	18	junction_5	165.389644098414	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831384	4826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828761_4829475_4830160_4830290_4830374_4831166_4831239_4831326
ES.13029.1	chr16	+	3651	1	Antisense	novelGene_ENSMUSG00000022536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTCATGTATCTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	4851946	4855597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_4851900_4855600
ES.1303.1	chr1	-	177	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTAAGATGGA	NA	False	NA	NA	False	NA	NA	NA	131922524	131922347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131922300_131922500
ES.13030.1	chr16	-	3367	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-64	-11	-58	11	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGTACCCAAATGCTA	8052	False	NA	3	True	AATAAA	-24	NA	4867785	4831761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.10	chr16	-	3770	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_9	298.115294624226	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8121	False	NA	-1	True	AATAAA	-20	NA	4867716	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4847572_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.100	chr16	-	7344	4	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	24676	0	intron_retention	FALSE	canonical	3	1061	junction_2	71.4438396380137	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	False	NA	-8	True	AATAAA	-13	NA	4843045	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4837314_4838130
ES.13030.104	chr16	-	6057	13	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_4	436.218305120524	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8120	False	NA	-8	True	AATAAA	-13	NA	4867717	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837943_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848102_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.105	chr16	-	4199	14	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	744	junction_5	129.03130210564	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8107	False	NA	-8	True	AATAAA	-13	NA	4867730	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.106	chr16	-	3089	15	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	362.489690212293	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8121	False	NA	-8	True	AATAAA	-13	NA	4867716	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.108	chr16	-	6147	13	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_4	388.803104625808	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8111	False	NA	-8	True	AATAAA	-13	NA	4867726	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837848_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.11	chr16	-	5861	13	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	6	7	intron_retention	FALSE	canonical	3	303	junction_6	247.06943468498	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8122	False	NA	-1	True	AATAAA	-20	NA	4867715	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.110	chr16	-	4539	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_6	497.332285643864	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8121	False	NA	-8	True	AATAAA	-13	NA	4867716	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4840662_4840772_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.111	chr16	-	3929	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	744	junction_6	124.433922305809	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8110	False	NA	-8	True	AATAAA	-13	NA	4867727	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.113	chr16	-	3372	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	387.592443610231	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8114	False	NA	-8	True	AATAAA	-13	NA	4867723	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4856680_4856759_4865597_4865678_4866613_4866651_4867669
ES.13030.114	chr16	-	5075	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	32	junction_13	398.729007508322	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8106	False	NA	-9	True	AATAAA	-12	NA	4867731	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.115	chr16	-	3968	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	23	junction_13	387.280409465229	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8110	False	NA	-9	True	AATAAA	-12	NA	4867727	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
ES.13030.116	chr16	-	2775	13	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	13511	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	384.929313496503	1205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	NA	False	NA	-9	True	AATAAA	-12	NA	4854210	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4832637_4832697_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099
ES.13030.118	chr16	-	2969	14	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-1	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	373.15791349289	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8115	False	NA	-9	True	AATAAA	-12	NA	4867722	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.12	chr16	-	3475	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-11	7	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_4	338.489678162012	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8099	False	NA	-1	True	AATAAA	-20	NA	4867738	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837953_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.120	chr16	-	3485	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	465.29952970506	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8110	False	NA	-9	True	AATAAA	-12	NA	4867727	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839119_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.121	chr16	-	3235	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.566912506689	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8111	False	NA	-9	True	AATAAA	-12	NA	4867726	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4832637_4832697_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.122	chr16	-	11727	13	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_6	327.842558334874	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAACTGTATCATTGT	8100	False	NA	-9	True	AATAAA	-12	NA	4867737	4831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4847272_4847362_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.123	chr16	-	5033	15	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_10	440.815269745521	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCATAACTGTATCATTG	8109	False	NA	-10	True	AATAAA	-11	NA	4867728	4831774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4853859_4854014_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.124	chr16	-	3712	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_15	300.53877546093	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCATAACTGTATCATTG	8114	False	NA	-10	True	AATAAA	-11	NA	4867723	4831774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867249
ES.13030.127	chr16	-	3361	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	440.417397902263	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGGTACCATAACTGT	8111	False	NA	-17	True	AATAAA	-4	NA	4867726	4831781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836833_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.128	chr16	-	3191	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	-10	99	-10	-99	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGTGTGATAATGTT	8100	False	NA	-107	True	AATGAA	-17	NA	4867737	4831871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.129	chr16	-	3196	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-5	101	1	-101	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGATTGTGTGATAATG	8111	False	NA	-109	True	AATGAA	-15	NA	4867726	4831873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.13	chr16	-	4446	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	5	intron_retention	FALSE	canonical	3	32	junction_14	386.158424599139	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8110	False	NA	-3	True	AATAAA	-18	NA	4867727	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.130	chr16	-	4945	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	18	-103	intron_retention	FALSE	canonical	3	32	junction_13	398.729007508322	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGGATTGTGTGATAA	8134	False	NA	-111	True	AATGAA	-13	NA	4867703	4831875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.131	chr16	-	3014	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-7	285	-1	-285	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTTTAAGCTATTTC	8109	False	NA	NA	False	NA	NA	NA	4867728	4832057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.132	chr16	-	3133	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	-285	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	1205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTTTAAGCTATTTC	8114	False	NA	NA	False	NA	NA	NA	4867723	4832057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.133	chr16	-	5990	10	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	-3848	intron_retention	FALSE	canonical	3	78	junction_9	364.012209807431	1180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAATTGGTGTTGTTTA	8108	False	NA	NA	False	AAAACA	-15	NA	4867729	4835620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4837314_4838130_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866218_4866613
ES.13030.134	chr16	-	1601	10	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-3	11918	-3	26	5prime_fragment	FALSE	canonical	3	1044	junction_8	69.7961759184521	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTTTTTTTTAAAAAA	8113	False	NA	NA	False	NA	NA	NA	4867724	4843690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.135	chr16	-	3559	8	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	11918	0	26	intron_retention	FALSE	canonical	3	1094	junction_3	51.9909725287938	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTTTTTTTTAAAAAA	8110	False	NA	NA	False	NA	NA	NA	4867727	4843690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.136	chr16	-	3217	1	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	20788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4846933	4843716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4843700_4846900
ES.13030.137	chr16	-	4606	6	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1146	junction_2	43.194444087174	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8110	False	NA	NA	False	NA	NA	NA	4867727	4843717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854922_4865597
ES.13030.138	chr16	-	1283	9	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	14965	0	-3021	5prime_fragment	FALSE	canonical	3	1044	junction_7	74.0286051131588	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTCTCTGTCTGTCTGT	8110	False	NA	NA	False	AGTAAA	-18	NA	4867727	4846737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.139	chr16	-	2139	6	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	16480	0	-4536	5prime_fragment	FALSE	canonical	3	1044	junction_4	73.936188703503	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGTTCAGAAATAGAA	8110	False	NA	NA	False	NA	NA	NA	4867727	4848252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.14	chr16	-	3427	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	406.843028697801	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8092	False	NA	-3	True	AATAAA	-18	NA	4867745	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.140	chr16	-	8358	3	NIC	ENSMUSG00000022536.15	novel	3222	8	NA	NA	-2	-4536	intron_retention	FALSE	canonical	3	1213	junction_2	1.5	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGTTCAGAAATAGAA	8108	False	NA	NA	False	NA	NA	NA	4867729	4848252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4854340_4854782_4854922_4865597
ES.13030.141	chr16	-	6170	1	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	13299	-4536	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAGTTCAGAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	4854422	4848252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4848300_4854400
ES.13030.142	chr16	-	4059	4	ISM	ENSMUSG00000022536.15	ENSMUST00000231132.2	3222	8	0	4565	0	-4565	intron_retention	FALSE	canonical	3	1188	junction_1	12.5521135891752	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAGAAA	8116	False	NA	NA	False	NA	NA	NA	4867721	4848281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.143	chr16	-	8923	5	NNC	ENSMUSG00000022536.15	novel	1344	2	NA	NA	-10	7166	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	528.579937190204	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	8100	False	NA	NA	False	NA	NA	NA	4867737	4856565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4860865_4861079_4863470_4863548_4865678_4866613_4866651_4867669
ES.13030.15	chr16	-	5056	14	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	5	intron_retention	FALSE	canonical	0	0	junction_4	326.343939523787	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8111	False	NA	-3	True	AATAAA	-18	NA	4867726	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837943_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
ES.13030.16	chr16	-	3581	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	302.925175946507	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8114	False	NA	-3	True	AATAAA	-18	NA	4867723	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837848_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.17	chr16	-	3251	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	300.446970732311	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8111	False	NA	-3	True	AATAAA	-18	NA	4867726	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836833_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.19	chr16	-	3683	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	2	5	intron_retention	FALSE	canonical	1	5	junction_3	406.059536199774	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8112	False	NA	-3	True	AATAAA	-18	NA	4867725	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4837314_4837848_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854266_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.2	chr16	-	3363	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	417.903229677637	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGTACCCAAATGCTA	8116	False	NA	3	True	AATAAA	-24	NA	4867721	4831761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4856680_4856759_4865597_4865678_4866613_4866651_4867669
ES.13030.20	chr16	-	4256	15	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	5	intron_retention	FALSE	canonical	3	303	junction_5	228.585088877518	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8108	False	NA	-3	True	AATAAA	-18	NA	4867729	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.21	chr16	-	4299	15	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	5	-5	-1	5	intron_retention	FALSE	canonical	3	303	junction_6	229.261191389976	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8115	False	NA	-3	True	AATAAA	-18	NA	4867722	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.22	chr16	-	3338	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	408.143658646989	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8097	False	NA	-3	True	AATAAA	-18	NA	4867740	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
ES.13030.23	chr16	-	4512	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	5	intron_retention	FALSE	canonical	0	0	junction_4	314.678853137997	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8107	False	NA	-3	True	AATAAA	-18	NA	4867730	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837943_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.24	chr16	-	3483	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-56	5	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8054	False	NA	-3	True	AATAAA	-18	NA	4867783	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.25	chr16	-	3604	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	5	intron_retention	FALSE	canonical	3	23	junction_13	386.950952964326	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8116	False	NA	-3	True	AATAAA	-18	NA	4867721	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
ES.13030.26	chr16	-	3565	18	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	480.634989445821	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8114	False	NA	-3	True	AATAAA	-18	NA	4867723	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4838449_4838592_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.27	chr16	-	3066	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	5	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	305.295983850266	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8107	False	NA	-3	True	AATAAA	-18	NA	4867730	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.28	chr16	-	4275	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	5	intron_retention	FALSE	canonical	3	744	junction_5	124.271448278126	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8107	False	NA	-3	True	AATAAA	-18	NA	4867730	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.29	chr16	-	3183	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_11	445.367543596173	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8114	False	NA	-3	True	AATAAA	-18	NA	4867723	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.3	chr16	-	3443	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	417.832633209758	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8108	False	NA	-1	True	AATAAA	-20	NA	4867729	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4853859_4854014_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.30	chr16	-	3125	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	314.772974555002	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8108	False	NA	-3	True	AATAAA	-18	NA	4867729	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.32	chr16	-	4845	14	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	1	5	intron_retention	FALSE	canonical	3	303	junction_6	237.54777781651	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8117	False	NA	-3	True	AATAAA	-18	NA	4867720	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
ES.13030.33	chr16	-	4179	14	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	5	intron_retention	FALSE	canonical	3	303	junction_5	238.006290006882	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8114	False	NA	-3	True	AATAAA	-18	NA	4867723	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.34	chr16	-	3392	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	417.821414452395	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATCATTGTACCCAA	8114	False	NA	-3	True	AATAAA	-18	NA	4867723	4831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866205_4866613_4866651_4867669
ES.13030.35	chr16	-	3285	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	305.128490239039	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8121	False	NA	-4	True	AATAAA	-17	NA	4867716	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847203_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.36	chr16	-	3348	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	375.81810759994	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8104	False	NA	-4	True	AATAAA	-17	NA	4867733	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
ES.13030.37	chr16	-	4087	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_7	398.052927803996	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8111	False	NA	-4	True	AATAAA	-17	NA	4867726	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4842840_4842996_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.38	chr16	-	4610	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	721	4	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_9	398.216995506475	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8837	False	NA	-4	True	AATAAA	-17	NA	4867000	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4847572_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866218_4866613
ES.13030.39	chr16	-	3234	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	347.260107444293	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8109	False	NA	-4	True	AATAAA	-17	NA	4867728	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836833_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.41	chr16	-	4950	14	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	2	4	intron_retention	FALSE	canonical	3	744	junction_6	128.023342915895	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8112	False	NA	-4	True	AATAAA	-17	NA	4867725	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.42	chr16	-	5480	14	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	4	intron_retention	FALSE	canonical	0	0	junction_4	324.697528797342	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8107	False	NA	-4	True	AATAAA	-17	NA	4867730	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837943_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.43	chr16	-	4034	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-1	4	intron_retention	FALSE	canonical	3	32	junction_13	418.882555802406	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8115	False	NA	-4	True	AATAAA	-17	NA	4867722	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.44	chr16	-	3801	2	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	29355	-4	29355	4	intron_retention	FALSE	canonical	3	1226	junction_1	0	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	NA	False	NA	-4	True	AATAAA	-17	NA	4838366	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4833467_4836263
ES.13030.45	chr16	-	5887	13	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	4	intron_retention	FALSE	canonical	3	744	junction_6	130.530621141384	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8111	False	NA	-4	True	AATAAA	-17	NA	4867726	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.47	chr16	-	4209	15	NIC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	5	4	intron_retention	FALSE	canonical	3	303	junction_6	228.914340988511	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8121	False	NA	-4	True	AATAAA	-17	NA	4867716	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
ES.13030.48	chr16	-	3490	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	385.519373702542	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8118	False	NA	-4	True	AATAAA	-17	NA	4867719	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4847572_4847769_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.49	chr16	-	5227	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	4	intron_retention	FALSE	canonical	0	0	junction_7	510.245796977627	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8114	False	NA	-4	True	AATAAA	-17	NA	4867723	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4842840_4842996_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.50	chr16	-	3456	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	386.028314214126	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8111	False	NA	-4	True	AATAAA	-17	NA	4867726	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4842840_4842996_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.52	chr16	-	4349	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	6	4	intron_retention	FALSE	canonical	3	23	junction_14	387.654806353396	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8122	False	NA	-4	True	AATAAA	-17	NA	4867715	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613
ES.13030.54	chr16	-	5470	12	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	4	intron_retention	FALSE	non_canonical	0	0	junction_5	404.791773835992	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8108	False	NA	-4	True	AATAAA	-17	NA	4867729	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4837314_4838130_4839295_4844371_4844472_4847197_4847274_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.55	chr16	-	4134	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	444.458901186319	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8116	False	NA	-4	True	AATAAA	-17	NA	4867721	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4866955
ES.13030.56	chr16	-	3234	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.566912506689	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8114	False	NA	-4	True	AATAAA	-17	NA	4867723	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4832863_4832926_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.57	chr16	-	4429	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	0	4	intron_retention	FALSE	non_canonical	0	0	junction_8	479.219012792921	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8110	False	NA	-4	True	AATAAA	-17	NA	4867727	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847274_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.58	chr16	-	3427	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	387.276503087587	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8113	False	NA	-4	True	AATAAA	-17	NA	4867724	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865195_4865324_4865597_4865678_4866613_4866651_4867669
ES.13030.6	chr16	-	3367	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	-80	-7	-80	7	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8030	False	NA	-1	True	AATAAA	-20	NA	4867807	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.61	chr16	-	3259	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	351.176625392725	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8117	False	NA	-4	True	AATAAA	-17	NA	4867720	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847400_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.62	chr16	-	4221	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_4	476.64660097626	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATCATTGTACCCA	8115	False	NA	-4	True	AATAAA	-17	NA	4867722	4831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837943_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.66	chr16	-	5053	15	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	3	intron_retention	FALSE	canonical	3	32	junction_13	432.54892373993	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613
ES.13030.67	chr16	-	3571	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	348.833803153052	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8104	False	NA	-5	True	AATAAA	-16	NA	4867733	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837848_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.69	chr16	-	3222	17	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	341.383742107031	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8108	False	NA	-5	True	AATAAA	-16	NA	4867729	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4832449_4832511_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.7	chr16	-	4343	15	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-25	-7	-19	7	intron_retention	FALSE	canonical	3	744	junction_6	123.77780042298	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8091	False	NA	-1	True	AATAAA	-20	NA	4867746	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.70	chr16	-	3553	18	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	514.025950901987	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847362_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865195_4865324_4865597_4865678_4866093_4866218_4866613_4866651_4867669
ES.13030.71	chr16	-	2984	14	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	1592	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_11	446.919634569028	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	9708	False	NA	-5	True	AATAAA	-16	NA	4866129	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866093
ES.13030.72	chr16	-	3738	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	3	intron_retention	FALSE	canonical	2	59	junction_3	300.325206387737	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8117	False	NA	-5	True	AATAAA	-16	NA	4867720	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4837314_4837953_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.73	chr16	-	3841	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_16	441.216429317858	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867249
ES.13030.74	chr16	-	3393	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	350.664359941716	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8113	False	NA	-5	True	AATAAA	-16	NA	4867724	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838346_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.75	chr16	-	3405	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	384.879445411157	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8110	False	NA	-5	True	AATAAA	-16	NA	4867727	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4834814_4834919_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.76	chr16	-	3475	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	387.592443610231	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8110	False	NA	-5	True	AATAAA	-16	NA	4867727	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4856680_4856855_4865597_4865678_4866613_4866651_4867669
ES.13030.77	chr16	-	3471	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_4	290.589439281992	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8117	False	NA	-5	True	AATAAA	-16	NA	4867720	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837953_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.79	chr16	-	3097	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_13	446.54846197125	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
ES.13030.8	chr16	-	3703	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_15	347.576460013557	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8114	False	NA	-1	True	AATAAA	-20	NA	4867723	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867249
ES.13030.81	chr16	-	4858	14	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	4	3	intron_retention	FALSE	canonical	3	744	junction_6	126.812305975191	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8120	False	NA	-5	True	AATAAA	-16	NA	4867717	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
ES.13030.82	chr16	-	3093	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	347.842850852061	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8110	False	NA	-5	True	AATAAA	-16	NA	4867727	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833277_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.83	chr16	-	3260	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	317.004997385446	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4867669
ES.13030.86	chr16	-	5362	15	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	3	intron_retention	FALSE	canonical	1	1	junction_13	444.434127714728	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTATCATTGTACCC	8114	False	NA	-5	True	AATAAA	-16	NA	4867723	4831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865195_4865324_4865597
ES.13030.88	chr16	-	3373	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	387.592443610231	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTATCATTGTACC	8111	False	NA	-6	True	AATAAA	-15	NA	4867726	4831770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4856919_4856994_4865597_4865678_4866613_4866651_4867669
ES.13030.89	chr16	-	3283	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	306.270033358364	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTATCATTGTACC	8118	False	NA	-6	True	AATAAA	-15	NA	4867719	4831770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866642_4867669
ES.13030.9	chr16	-	5260	14	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	-6	-7	0	7	intron_retention	FALSE	canonical	3	744	junction_6	126.022586498184	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATCATTGTACCCAAAT	8110	False	NA	-1	True	AATAAA	-20	NA	4867727	4831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13030.90	chr16	-	3153	10	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	17931	2	intron_retention	FALSE	canonical	0	0	junction_3	375.784217041879	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTATCATTGTACC	NA	False	NA	-6	True	AATAAA	-15	NA	4849790	4831770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4837314_4837943_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750
ES.13030.91	chr16	-	3130	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	301.99776305279	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTATCATTGTACC	8090	False	NA	-6	True	AATAAA	-15	NA	4867747	4831770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833277_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.92	chr16	-	4225	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	5	2	intron_retention	FALSE	canonical	3	744	junction_6	122.65816528142	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTATCATTGTACC	8121	False	NA	-6	True	AATAAA	-15	NA	4867716	4831770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
ES.13030.93	chr16	-	3374	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	387.592443610231	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	8120	False	NA	-7	True	AATAAA	-14	NA	4867717	4831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4858156_4858242_4865597_4865678_4866613_4866651_4867669
ES.13030.94	chr16	-	4407	3	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	28431	-1	28431	1	intron_retention	FALSE	canonical	3	1061	junction_2	82.5	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	NA	False	NA	-7	True	AATAAA	-14	NA	4839290	4831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_4833467_4836263_4836389_4836703
ES.13030.95	chr16	-	4602	15	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	1	intron_retention	FALSE	canonical	2	5	junction_4	313.493156518086	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	8108	False	NA	-7	True	AATAAA	-14	NA	4867729	4831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837848_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ES.13030.96	chr16	-	3455	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	387.374047070464	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	8108	False	NA	-7	True	AATAAA	-14	NA	4867729	4831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4853859_4854014_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ES.13030.98	chr16	-	3742	16	NNC	ENSMUSG00000022536.15	novel	3280	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	352.404842948183	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	8114	False	NA	-7	True	AATAAA	-14	NA	4867723	4831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867204
ES.13030.99	chr16	-	6221	13	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	744	junction_5	130.878734160885	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8111	False	NA	-8	True	AATAAA	-13	NA	4867726	4831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ES.13031.1	chr16	+	6419	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	-63	0	-63	0	multi-exon	FALSE	canonical	3	47	junction_17	11.4435578952107	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCCTCATTTTTTCA	NA	False	NA	21	True	AATAAA	-21	NA	4867857	4904153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.10	chr16	+	6205	19	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.0707640465253	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867883	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882502_4882606_4882651_4888512_4888584_4889998_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.11	chr16	+	6504	19	FSM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	-47	-2	-36	2	multi-exon	FALSE	canonical	3	7	junction_2	22.3737197026631	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867884	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.12	chr16	+	6253	17	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.778500757995	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867890	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.13	chr16	+	3943	2	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	-29	-8908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGTGGTATGAGATG	NA	False	NA	NA	False	AATACA	-15	NA	4867891	4872527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4869363_4870055
ES.13031.14	chr16	+	1173	1	Genic_Genomic	ENSMUSG00000039473.9	novel	NA	NA	NA	NA	-29	-12371	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTATTTAAGATTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	4867891	4869064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_4867900_4869100
ES.13031.15	chr16	+	5430	12	NIC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	23.6751430131734	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867891	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4868646_4872940_4873229_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.16	chr16	+	6340	18	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.9277240760507	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867891	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.17	chr16	+	6427	18	NNC	ENSMUSG00000039473.9	novel	6356	18	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.377876858141	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGTCTTTCCTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	4867898	4904148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4870799_4870944_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.18	chr16	+	4405	2	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	9	-8708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4867940	4872727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4869341_4869722
ES.13031.19	chr16	+	6405	19	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.4472220644119	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867940	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868605_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.2	chr16	+	6406	17	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	-62	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	21.4301189917368	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867858	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891082_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.20	chr16	+	6033	19	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.9811639696051	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGATGTCTTTCCTCAT	NA	False	NA	14	True	AATAAA	-14	NA	4867940	4904146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868014_4868309_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.21	chr16	+	3622	7	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	9	2831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.5242317482856	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGCATTTTAAAAATTAA	NA	False	NA	NA	False	AATAAA	-28	NA	4867940	4884266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4872940_4873229_4879845_4880085_4880398_4880495_4880803_4880939_4881536_4881641_4882211
ES.13031.23	chr16	+	6474	19	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.4251509116409	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867946	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4870799_4870944_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891004_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.24	chr16	+	5155	16	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	27	3478	16	-7	intron_retention	FALSE	canonical	3	57	junction_2	8.42113742647367	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4867947	4900675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281
ES.13031.26	chr16	+	6563	17	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.8068904388405	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867947	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868875_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888413_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.27	chr16	+	4951	17	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	32	3445	21	26	5prime_fragment	FALSE	canonical	3	53	junction_16	9.80094861480255	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACTCTGTGAGAACC	NA	False	NA	NA	False	NA	NA	NA	4867952	4900708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757
ES.13031.28	chr16	+	6416	18	NIC	ENSMUSG00000039473.9	novel	6356	18	NA	NA	23	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	20.3909879001301	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGTCTTTCCTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	4867954	4904148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888413_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.29	chr16	+	6300	18	NNC	ENSMUSG00000039473.9	novel	6356	18	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3611000307859	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGTCTTTCCTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	4867964	4904148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4872940_4873229_4879852_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.3	chr16	+	1482	7	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	-62	802	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	29.0956277738693	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAGAAGAAGTAC	NA	False	NA	-59	True	NA	NA	NA	4867858	4882237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211
ES.13031.30	chr16	+	6773	15	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	64	5125	53	-1654	5prime_fragment	FALSE	canonical	3	57	junction_2	8.58124437957811	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTTTTTATTTATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	4867984	4899028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755
ES.13031.31	chr16	+	141	1	Intergenic	novelGene_10851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAATTATTATTTAA	NA	False	NA	NA	False	NA	NA	NA	4871186	4871327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4871200_4871300
ES.13031.33	chr16	+	8513	7	NIC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	4427	-1	intron_retention	FALSE	canonical	3	39	junction_6	14.7158267030961	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGTCTTTCCTCATTT	385	False	NA	16	True	AATAAA	-16	NA	4886696	4904148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4890290_4890872_4891002_4891185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.34	chr16	+	4605	11	ISM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	20456	-2	-2906	2	3prime_fragment	FALSE	canonical	3	47	junction_10	11.6486050667022	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	2076	False	NA	19	True	AATAAA	-19	NA	4888387	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.35	chr16	+	6264	8	NNC	ENSMUSG00000039473.9	novel	5589	17	NA	NA	-2658	2	intron_retention	FALSE	canonical	0	0	junction_2	28.3332933172987	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	2324	False	NA	19	True	AATAAA	-19	NA	4888635	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4890048_4890170_4891082_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.36	chr16	+	8632	4	ISM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	22349	3441	-347	30	intron_retention	FALSE	canonical	3	67	junction_1	2.35702260395516	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGTGAGAACCTGAT	4635	False	NA	NA	False	NA	NA	NA	4890946	4900712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4891002_4891185_4891333_4892185_4892237_4892333
ES.13031.37	chr16	+	5341	2	ISM	ENSMUSG00000039473.9	ENSMUST00000229355.2	2758	5	4213	-3467	-413	0	3prime_fragment	FALSE	canonical	3	81	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	9195	False	NA	17	True	AATAAA	-17	NA	4895506	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_4895980_4899281
ES.13031.4	chr16	+	6327	17	FSM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	-739	1	-62	-1	multi-exon	FALSE	canonical	3	39	junction_16	12.0167526291424	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTCCTCATTTTTTC	NA	False	NA	20	True	AATAAA	-20	NA	4867858	4904152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.5	chr16	+	6268	18	NNC	ENSMUSG00000039473.9	novel	6356	18	NA	NA	-62	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.3909879001301	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTCCTCATTTTTTC	NA	False	NA	20	True	AATAAA	-20	NA	4867858	4904152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882502_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13031.6	chr16	+	6421	18	NIC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	-43	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	23.2710818956738	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	4867877	4904151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ES.13031.8	chr16	+	6620	18	NNC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.3187403908969	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867881	4904149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_4868875_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ES.13032.1	chr16	-	3637	4	Antisense	novelGene_ENSMUSG00000039473.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAAGAAAGGTCAATA	NA	False	NA	NA	False	NA	NA	NA	4884045	4879035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4879933_4880398_4880494_4880802_4880937_4881534
ES.13032.2	chr16	-	6151	2	Antisense	novelGene_ENSMUSG00000039473.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAAGAAAGGTCAATA	NA	False	NA	NA	False	NA	NA	NA	4885784	4879035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4880937_4881534
ES.13032.3	chr16	-	1854	2	Antisense	novelGene_ENSMUSG00000039473.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAAGAAAGGTCAATA	NA	False	NA	NA	False	NA	NA	NA	4885780	4879035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_4879517_4884407
ES.13033.1	chr16	-	6284	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	-55	-12	-55	12	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACAATTTATTGAGTT	NA	False	NA	NA	False	NA	NA	NA	4950340	4904142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
ES.13033.2	chr16	-	6074	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	-17	160	-17	-160	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCACAGCAAGTATGACT	NA	False	NA	NA	False	AATAAA	-20	NA	4950302	4904314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
ES.13034.1	chr16	+	134	1	Intergenic	novelGene_10852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4975706	4975840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_4975700_4975800
ES.13035.1	chr16	+	1806	1	Antisense	novelGene_ENSMUSG00000023143.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4875	False	NA	NA	False	NA	NA	NA	5012551	5014357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_5012600_5014400
ES.13036.1	chr16	-	1397	9	NNC	ENSMUSG00000023143.11	novel	516	3	NA	NA	-241	28458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.9749921826134	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTAGTCTGGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	5021582	4984694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_4984916_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
ES.13036.10	chr16	-	1632	6	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.2711328402441	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021861	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5019237_5019378_5021204_5021664_5021760
ES.13036.11	chr16	-	2337	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	0	-4	intron_retention	FALSE	canonical	3	106	junction_1	5.80947501931113	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021876	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.12	chr16	-	2218	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	4	-4	intron_retention	FALSE	canonical	3	106	junction_1	8.42244026396151	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021862	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.13	chr16	-	2066	10	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	36.7870079052005	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021890	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013836_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.14	chr16	-	1888	8	NNC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	54.5549713404671	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021865	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5013923_5015418_5015483_5015575_5015678_5017479_5017609_5017806_5017916_5019223_5019378_5021204_5021664_5021760
ES.13036.2	chr16	-	4514	6	NIC	ENSMUSG00000023143.11	novel	2230	9	NA	NA	8	10	intron_retention	FALSE	canonical	3	106	junction_1	6.30555310817378	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCGTGTGAGGTCTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	5021858	5013142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5016488_5016594_5016801_5017479_5019378_5021204
ES.13036.3	chr16	-	1998	10	NNC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	5	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0227352390873	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGCGTGTGAGGTCTGA	NA	False	NA	NA	False	AATAAA	-24	NA	5021861	5013143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5013784_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.4	chr16	-	2162	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	-13	-6	-13	6	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGGGGCGTGTGAGGTC	NA	False	NA	NA	False	AATAAA	-21	NA	5021889	5013146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.5	chr16	-	2184	6	NIC	ENSMUSG00000023143.11	novel	2230	9	NA	NA	4	4	intron_retention	FALSE	canonical	1	1	junction_3	46.0894781918824	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGGGGCGTGTGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	5021872	5013148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5017479_5017916_5019237_5019378_5021204
ES.13036.6	chr16	-	3607	7	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	78	4	intron_retention	FALSE	canonical	3	106	junction_1	8.76387788342327	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGGGGCGTGTGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	5021788	5013148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.7	chr16	-	3116	7	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	4	3	intron_retention	FALSE	canonical	3	106	junction_1	6	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCAGGGGGCGTGTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	5021862	5013149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5017916_5019237_5019378_5021204_5021664_5021760
ES.13036.8	chr16	-	2943	6	NIC	ENSMUSG00000023143.11	novel	2230	9	NA	NA	2033	3	intron_retention	FALSE	canonical	3	106	junction_1	9.78979060041633	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCAGGGGGCGTGTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	5019308	5013149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013923_5015418_5015483_5015575_5016488_5016594_5017609_5017806_5017916_5019237
ES.13036.9	chr16	-	1974	9	NIC	ENSMUSG00000023143.11	novel	2143	10	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	39.3247695479579	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCACCAGGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	5021862	5013156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5013836_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ES.13037.1	chr16	+	1783	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	-21	-7	-21	-2	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGCTCTGAGCCTG	1259	False	NA	24	True	AATAAA	-25	NA	5051463	5062774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ES.13037.10	chr16	+	2112	11	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	6	-7	intron_retention	FALSE	canonical	0	0	junction_7	60.6027227111126	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTACAATGGAAGTGT	1303	False	NA	10	True	AATAAA	-11	NA	5051507	5062760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5058383_5059154_5059261_5060352_5060468_5061551_5061628_5062304
ES.13037.11	chr16	+	1763	13	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	56.3374628663931	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAAGTGTTTGCTCT	1303	False	NA	17	True	AATAAA	-18	NA	5051507	5062767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061520_5061628_5062304
ES.13037.12	chr16	+	4028	9	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_7	67.6609192961491	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATGGAAGTGTTTGCT	1303	False	NA	15	True	AATAAA	-16	NA	5051507	5062765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5059261_5060352_5060468_5061520_5061628_5062304
ES.13037.13	chr16	+	5917	13	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	104	7112	intron_retention	FALSE	canonical	0	0	junction_12	56.3404211517411	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCACTGAGCCTTGTT	1401	False	NA	NA	False	NA	NA	NA	5051605	5069888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5065142
ES.13037.14	chr16	+	303	1	Intergenic	novelGene_10854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGCAGAACACAGGCTG	2889	False	NA	NA	False	NA	NA	NA	5083838	5084141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_5083800_5084100
ES.13037.15	chr16	+	174	1	Intergenic	novelGene_10853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAGAAAAA	2889	False	NA	NA	False	NA	NA	NA	5083838	5084012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_5083800_5084000
ES.13037.2	chr16	+	3584	11	NIC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	187	junction_10	9.50789145920377	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGCTCTGAGCCT	1280	False	NA	23	True	AATAAA	-24	NA	5051484	5062773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5061628_5062304
ES.13037.3	chr16	+	2861	12	NIC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	4	2	intron_retention	FALSE	canonical	3	181	junction_10	10.2255554113737	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAGTGTTTGCTCTGA	1284	False	NA	19	True	AATAAA	-20	NA	5051488	5062769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ES.13037.4	chr16	+	4134	8	NIC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	181	junction_6	11.6180717779128	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAAGTGTTTGCTCT	1287	False	NA	17	True	AATAAA	-18	NA	5051491	5062767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5059261_5060352_5060468_5061551_5061628_5062304
ES.13037.5	chr16	+	4878	13	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	-5	7117	intron_retention	FALSE	canonical	0	0	junction_12	56.3404211517411	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGAGCCTTGTTTTTAC	1292	False	NA	NA	False	NA	NA	NA	5051496	5069893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5066295
ES.13037.6	chr16	+	4518	14	Fusion	ENSMUSG00000039427.15_ENSMUSG00000087168.2	novel	1755	13	NA	NA	-5	-10	multi-exon	FALSE	non_canonical	0	0	junction_12	73.0494685269579	120	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCTGGTGACTGGAGC	1292	False	NA	NA	False	ATTAAA	-20	NA	5051496	5107475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5103897_5104648_5104987
ES.13037.8	chr16	+	2877	12	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	4	4	intron_retention	FALSE	canonical	0	0	junction_10	58.8327226651831	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTTGCTCTGAGC	1301	False	NA	21	True	AATAAA	-22	NA	5051505	5062771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061520_5061628_5062304
ES.13037.9	chr16	+	2556	13	NNC	ENSMUSG00000039427.15	novel	1755	13	NA	NA	5	4805	intron_retention	FALSE	canonical	0	0	junction_12	56.3404211517411	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCAGTGGTAGGGT	1302	False	NA	NA	False	ATTAAA	-12	NA	5051506	5067581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5066295
ES.13038.1	chr16	-	3358	1	Antisense	novelGene_ENSMUSG00000039427.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGACAGGCTATAGCTT	NA	False	NA	NA	False	NA	NA	NA	5060486	5057128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_5057100_5060500
ES.13039.1	chr16	-	2182	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	-11	-1	-11	1	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCGCATGTGCACAGC	NA	False	NA	-1	True	NA	NA	NA	5073858	5062014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.11	chr16	-	2106	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.156061384151	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTATGTGCGCATGTG	NA	False	NA	-7	True	NA	NA	NA	5073812	5062020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.12	chr16	-	4254	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	5	-5	intron_retention	FALSE	canonical	3	438	junction_1	20.4215572373901	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTATGTGCGCATGTG	NA	False	NA	-7	True	NA	NA	NA	5073788	5062020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.13	chr16	-	1452	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	-4	722	-4	5	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCTGTCAGACAGTTC	NA	False	NA	0	True	AATAAA	-22	NA	5073851	5062737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.14	chr16	-	1444	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.156061384151	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCCTGTCAGACAG	NA	False	NA	-3	True	AATAAA	-19	NA	5073870	5062740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.15	chr16	-	1501	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-2	2	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCCTGTCAGACAG	NA	False	NA	-3	True	AATAAA	-19	NA	5073822	5062740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.16	chr16	-	2456	6	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	2	intron_retention	FALSE	canonical	3	270	junction_1	86.7571322716467	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCCTGTCAGACAG	NA	False	NA	-3	True	AATAAA	-19	NA	5073812	5062740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5063250_5065316_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.17	chr16	-	1403	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	167.985057644532	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTCCTGTCAGACAG	NA	False	NA	-3	True	AATAAA	-19	NA	5073812	5062740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070945_5073704
ES.13039.18	chr16	-	1308	9	NNC	ENSMUSG00000022544.15	novel	1490	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	161.606340763598	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGTCCTGTCAGACA	NA	False	NA	-4	True	AATAAA	-18	NA	5073805	5062741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066546_5066639_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.19	chr16	-	1459	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	168.17714178927	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGTCCTGTCAGACA	NA	False	NA	-4	True	AATAAA	-18	NA	5073814	5062741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068468_5070888_5070952_5073704
ES.13039.2	chr16	-	2149	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	166.644923751805	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTGCGCATGTGCACA	NA	False	NA	-3	True	NA	NA	NA	5073812	5062016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067328_5068338_5068420_5070888_5070952_5073704
ES.13039.20	chr16	-	3585	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	-102	-2496	-75	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	False	NA	-5	True	AATAAA	-17	NA	5073922	5062742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.21	chr16	-	1486	7	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_1	178.593968418745	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGTCCTGTCAG	NA	False	NA	-7	True	AATAAA	-15	NA	5073835	5062744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065340_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.22	chr16	-	1303	9	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.942491731998	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGACTGTCCTGTCAG	NA	False	NA	-7	True	AATAAA	-15	NA	5073812	5062744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066546_5066639_5066695_5066775_5066910_5067210_5067313_5068338_5068411_5070888_5070952_5073704
ES.13039.23	chr16	-	1501	7	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	6	-5	intron_retention	FALSE	canonical	1	1	junction_4	177.14095141064	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTATGACTGTCCTGT	NA	False	NA	-10	True	AATAAA	-12	NA	5073814	5062747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067328_5068338_5068420_5070888_5070952_5073704
ES.13039.24	chr16	-	3280	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	3	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.156061384151	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTATGACTGTCCTGT	NA	False	NA	-10	True	AATAAA	-12	NA	5073802	5062747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064195_5064374_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.25	chr16	-	1237	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	25	908	-2	-181	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTCATGGGAAAGCGG	NA	False	NA	NA	False	NA	NA	NA	5073822	5062923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.26	chr16	-	3039	8	NNC	ENSMUSG00000022544.15	novel	1490	9	NA	NA	-2	-181	intron_retention	FALSE	canonical	0	0	junction_1	212.075746960796	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTCATGGGAAAGCGG	NA	False	NA	NA	False	NA	NA	NA	5073807	5062923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065340_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5070217_5070844_5070952_5073704
ES.13039.27	chr16	-	1341	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	0	-183	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGTCATGGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	5073847	5062925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.28	chr16	-	4140	6	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-202	intron_retention	FALSE	non_canonical	0	0	junction_1	194.614490724612	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073813	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064195_5064374_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.29	chr16	-	4463	5	NNC	ENSMUSG00000022544.15	novel	695	4	NA	NA	8	-202	intron_retention	FALSE	non_canonical	0	0	junction_1	212.080615568703	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073839	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.3	chr16	-	3972	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	28	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.156061384151	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTGCGCATGTGCACA	NA	False	NA	-3	True	NA	NA	NA	5073765	5062016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064317_5064498_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.30	chr16	-	6590	5	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	-4	-202	intron_retention	TRUE	non_canonical	0	0	junction_1	210.863700052901	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073800	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064483_5064668_5066910_5067210_5067313_5068338_5070952_5073704
ES.13039.31	chr16	-	4137	6	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	6	-202	intron_retention	FALSE	non_canonical	0	0	junction_1	194.614490724612	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073814	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.32	chr16	-	5155	5	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	-2	-202	intron_retention	TRUE	non_canonical	0	0	junction_1	209.041861836332	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073807	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064646_5064830_5066910_5067210_5068420_5070888_5070952_5073704
ES.13039.33	chr16	-	4320	5	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-202	intron_retention	FALSE	canonical	3	476	junction_1	7.46240577829965	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073813	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.34	chr16	-	4048	7	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	-1	-202	intron_retention	FALSE	non_canonical	0	0	junction_1	178.836439861182	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073806	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.35	chr16	-	3074	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-1	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.156061384151	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073797	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.36	chr16	-	3305	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	-24	-2294	3	-202	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073844	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.39	chr16	-	1194	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	7	-202	intron_retention	FALSE	canonical	0	0	junction_3	171.22916974461	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073813	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5063250_5065316_5065464_5066428_5066546_5066639_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.4	chr16	-	4098	7	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	-7	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	178.593968418745	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTGCGCATGTGCACA	NA	False	NA	-3	True	NA	NA	NA	5073812	5062016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.40	chr16	-	5463	4	NNC	ENSMUSG00000022544.15	novel	695	4	NA	NA	7	-202	intron_retention	FALSE	non_canonical	0	0	junction_1	229.104052052046	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5073813	5062944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5068420_5070888_5070952_5073704
ES.13039.41	chr16	-	7822	4	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-231	intron_retention	FALSE	non_canonical	0	0	junction_1	220.139854536964	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5073813	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5066695_5066775_5070952_5073704
ES.13039.42	chr16	-	4411	5	NNC	ENSMUSG00000022544.15	novel	695	4	NA	NA	7	-231	intron_retention	TRUE	non_canonical	0	0	junction_1	212.080615568703	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5073813	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064285_5064465_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.43	chr16	-	4393	5	NNC	ENSMUSG00000022544.15	novel	695	4	NA	NA	-4	-231	intron_retention	TRUE	non_canonical	0	0	junction_1	212.080615568703	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5073800	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064562_5064747_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.44	chr16	-	1345	2	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	2294	-231	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5064440	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064175_5064296
ES.13039.45	chr16	-	2661	6	NNC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.921153715132	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5073813	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5065464_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.46	chr16	-	7902	3	NNC	ENSMUSG00000022544.15	novel	695	4	NA	NA	-7	-231	intron_retention	FALSE	non_canonical	0	0	junction_1	243.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5073812	5062973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5070952_5073704
ES.13039.47	chr16	-	2863	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	-7	-428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.156061384151	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGAAGCTGGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	5073812	5063170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.48	chr16	-	2511	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	6	-1530	6	-966	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCTCACAGTAATTG	NA	False	NA	NA	False	NA	NA	NA	5073814	5063708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.49	chr16	-	1537	1	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	1386	-1069	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAATTTGTAGAATGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	5065348	5063811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5063800_5065300
ES.13039.5	chr16	-	2241	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	8	-2	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073839	5062017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.50	chr16	-	1062	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	1	intron_retention	FALSE	canonical	3	438	junction_1	20.4215572373901	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTCTCTTTCTGTGGT	NA	False	NA	-1	True	NA	NA	NA	5073813	5065237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.51	chr16	-	990	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	-4	1	-4	-1	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTTCTCTTTCTGTG	NA	False	NA	-3	True	NA	NA	NA	5073824	5065239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.52	chr16	-	2086	5	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-1	intron_retention	FALSE	canonical	3	438	junction_1	19.7800404448525	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTTCTCTTTCTGTG	NA	False	NA	-3	True	NA	NA	NA	5073813	5065239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5066910_5067210_5068420_5070888_5070952_5073704
ES.13039.53	chr16	-	3051	4	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-1	intron_retention	FALSE	canonical	3	476	junction_1	4.78423336480244	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTTCTCTTTCTGTG	NA	False	NA	-3	True	NA	NA	NA	5073813	5065239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5066910_5067210_5068420_5070888_5070952_5073704
ES.13039.54	chr16	-	845	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	181.055129725727	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCTTCTCTTTCTGTG	NA	False	NA	-3	True	NA	NA	NA	5073813	5065239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5066695_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.56	chr16	-	1359	5	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-3	intron_retention	FALSE	canonical	3	438	junction_1	22.8295313136297	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCATCCTTCTCTTTCTG	NA	False	NA	-5	True	NA	NA	NA	5073813	5065241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.7	chr16	-	4067	6	NIC	ENSMUSG00000022544.15	novel	987	7	NA	NA	7	-2	intron_retention	FALSE	canonical	3	27	junction_2	181.055129725727	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073813	5062017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_5065464_5066428_5066695_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.8	chr16	-	4227	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	-19	-3221	8	-2	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGCGCATGTGCAC	NA	False	NA	-4	True	NA	NA	NA	5073839	5062017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.13039.9	chr16	-	4016	8	NNC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.156061384151	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATGTGCGCATGTGCA	NA	False	NA	-5	True	NA	NA	NA	5073813	5062018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_5064245_5064428_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ES.1304.1	chr1	+	176	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTTAAAAGAAAAA	8353	False	NA	NA	False	NA	NA	NA	131927368	131927544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131927400_131927500
ES.13040.1	chr16	-	176	1	Intergenic	novelGene_10855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5299618	5299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_5299400_5299600
ES.13041.1	chr16	+	204	1	Intergenic	novelGene_10856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCACAGCCTCATGTTGA	NA	False	NA	NA	False	NA	NA	NA	5334724	5334928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_5334700_5334900
ES.13042.1	chr16	+	253	1	Intergenic	novelGene_10857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAGACACAC	NA	False	NA	NA	False	NA	NA	NA	6145768	6146021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_6145800_6146000
ES.13043.1	chr16	-	4578	1	Intergenic	novelGene_10858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTTGGAGATGTCA	NA	False	NA	NA	False	AATACA	-37	NA	7746954	7742376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7742400_7747000
ES.13043.10	chr16	-	4799	2	Intergenic	novelGene_10867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTATAGGAGACTCCCA	NA	False	NA	NA	False	ATTAAA	-36	NA	7769589	7761679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7766403_7769513
ES.13043.11	chr16	-	2580	3	Intergenic	novelGene_10868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCATGTGCTGTCCT	NA	False	NA	NA	False	AAGAAA	-19	NA	7769541	7764200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7766673_7768342_7768423_7769513
ES.13043.2	chr16	-	5995	1	Intergenic	novelGene_10859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAGTGCAAGTCATTC	NA	False	NA	NA	False	AATAAA	-33	NA	7749760	7743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7743800_7749800
ES.13043.3	chr16	-	7609	2	Intergenic	novelGene_10860	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACAATGCACATGTTA	NA	False	NA	NA	False	AAGAAA	-1	NA	7756056	7748186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7755620_7755880
ES.13043.4	chr16	-	1814	3	Intergenic	novelGene_10861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	5.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGACAATGCACAT	NA	False	NA	NA	False	NA	NA	NA	7769539	7748190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7749899_7768342_7768423_7769513
ES.13043.5	chr16	-	8543	2	Intergenic	novelGene_10862	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7756857	7748227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7755707_7755793
ES.13043.6	chr16	-	2541	1	Intergenic	novelGene_10863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATGGACCAGGTGGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	7751592	7749051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7749100_7751600
ES.13043.7	chr16	-	10418	3	Intergenic	novelGene_10864	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTTCCTAAATGAAGTT	NA	False	NA	NA	False	NA	NA	NA	7761665	7750487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7756067_7756639_7759514_7759700
ES.13043.8	chr16	-	3596	1	Intergenic	novelGene_10865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTTGTGAATTAAATCT	NA	False	NA	NA	False	AATAAA	-17	NA	7754793	7751197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7751200_7754800
ES.13043.9	chr16	-	433	1	Intergenic	novelGene_10866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATGGTGTGGAAATT	NA	False	NA	NA	False	AATAAA	-25	NA	7752235	7751802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_7751800_7752200
ES.13044.1	chr16	+	1388	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	-41	478	-41	10	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGAGATGCTGTCATTT	NA	False	NA	13	True	AATAAA	-22	NA	8288610	8308070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.10	chr16	+	2298	9	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	4	intron_retention	FALSE	canonical	3	39	junction_3	52.0042065606235	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8288644	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.11	chr16	+	1210	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	60.3712792478732	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8288646	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8288730_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.12	chr16	+	1514	12	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-5	13	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_7	71.9216745684308	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGATGCTGTCATTTTAG	NA	False	NA	16	True	AATAAA	-25	NA	8288646	8308073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303522_8303605_8303651_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.15	chr16	+	2559	9	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	5747	484	5731	4	3prime_fragment	FALSE	canonical	3	136	junction_1	22.9179923858963	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8294398	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.16	chr16	+	921	9	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7323	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.9295705380164	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8296106	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8304549_8304661_8305222_8305326_8306522_8306692_8307965
ES.13044.17	chr16	+	2419	1	Antisense	novelGene_ENSMUSG00000077557.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAAAGACTGCTCT	NA	False	NA	NA	False	NA	NA	NA	8296692	8299111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8296700_8299100
ES.13044.18	chr16	+	3881	6	ISM	ENSMUSG00000039345.17	ENSMUST00000150790.2	554	7	9581	-1518	-5194	4	3prime_fragment	FALSE	canonical	3	190	junction_5	6.73498329619309	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8298235	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522
ES.13044.2	chr16	+	1324	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-19	9	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGAGATGCTGTCATT	NA	False	NA	12	True	AATAAA	-21	NA	8288632	8308069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.3	chr16	+	1169	10	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-16	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	71.3963031169362	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCCTTGAGATGCTGTC	NA	False	NA	9	True	AATAAA	-18	NA	8288635	8308066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8291694_8291831_8295979_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.4	chr16	+	4215	11	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	83.9705305449477	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCATCTTGCCCTTGAG	NA	False	NA	1	True	AATAAA	-10	NA	8288639	8308058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8291694_8292424_8293467_8295111_8295157_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.5	chr16	+	1193	11	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	56.14410031339	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCATCTTGCCCTTGA	NA	False	NA	0	True	AATAAA	-9	NA	8288643	8308057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8291694_8291831_8295979_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.6	chr16	+	5305	9	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-8	1	intron_retention	FALSE	canonical	3	39	junction_2	52.2731706997002	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTTGCCCTTGAGATG	NA	False	NA	4	True	AATAAA	-13	NA	8288643	8308061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8288730_8291694_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.7	chr16	+	2339	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	4	intron_retention	FALSE	canonical	3	136	junction_3	21.2864067214528	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCTTGAGATGCTG	NA	False	NA	7	True	AATAAA	-16	NA	8288644	8308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8303810_8305222_8305326_8306522_8306692_8307965
ES.13044.8	chr16	+	1109	10	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	82.8391271541071	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTGTCATTTTAGATA	NA	False	NA	19	True	AATAAA	-28	NA	8288644	8308076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8291694_8291831_8295979_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305283_8305326_8306522_8306692_8307965
ES.13044.9	chr16	+	1059	10	NNC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.252563564392	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTTGCCCTTGAGAT	NA	False	NA	3	True	AATAAA	-12	NA	8288644	8308060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8288730_8295979_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ES.13045.1	chr16	-	3224	1	Intergenic	novelGene_10869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGATTTCGGTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	8321207	8317983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8318000_8321200
ES.13046.1	chr16	+	5015	15	NNC	ENSMUSG00000057880.13	novel	2414	15	NA	NA	-21	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4.62910049886276	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCACAGTCTATCGTGG	NA	False	NA	NA	False	NA	NA	NA	8331323	8440014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423379_8423525_8426719_8426858_8431846_8431994_8433753_8433866_8436368
ES.13046.2	chr16	+	1722	15	FSM	ENSMUSG00000057880.13	ENSMUST00000115839.9	2414	15	-14	706	-10	287	multi-exon	FALSE	canonical	1	1	junction_12	3.90251096561364	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATTGAACACTGTCT	NA	False	NA	NA	False	NA	NA	NA	8331334	8436728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8431846_8431994_8433753_8433866_8436368
ES.13046.3	chr16	+	4577	16	FSM	ENSMUSG00000057880.13	ENSMUST00000065987.14	4636	16	53	6	1	-6	multi-exon	FALSE	canonical	2	6	junction_13	3.20138858761146	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAATGTCAGAGTGAATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8331345	8439426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ES.13046.4	chr16	+	4415	15	FSM	ENSMUSG00000057880.13	ENSMUST00000115839.9	2414	15	-3	-1998	1	0	multi-exon	FALSE	canonical	1	1	junction_12	3.90251096561364	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGAATGTGGGCT	NA	False	NA	4	True	ATTAAA	-22	NA	8331345	8439432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8431846_8431994_8433753_8433866_8436368
ES.13046.5	chr16	+	1738	16	NNC	ENSMUSG00000057880.13	novel	696	10	NA	NA	-424	166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.02768199119819	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTGGGGCAGGCTCA	NA	False	NA	NA	False	CATAAA	-9	NA	8390341	8436607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8390415_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ES.13046.6	chr16	+	158	1	Intergenic	novelGene_10871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8398992	8399150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8399000_8399200
ES.13046.7	chr16	+	4246	12	ISM	ENSMUSG00000057880.13	ENSMUST00000065987.14	4636	16	69306	3	-892	-3	3prime_fragment	FALSE	canonical	2	6	junction_9	3.36977327142739	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGAGTGAATGTGG	NA	False	NA	1	True	ATTAAA	-19	NA	8400598	8439429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ES.13047.1	chr16	-	8021	1	Intergenic	novelGene_10870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	8380705	8372684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8372700_8380700
ES.13048.1	chr16	-	178	1	Intergenic	novelGene_10872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACCAACCAACCAA	NA	False	NA	NA	False	NA	NA	NA	8406090	8405912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8405900_8406100
ES.13049.1	chr16	-	178	1	Intergenic	novelGene_10873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	3961	False	NA	NA	False	NA	NA	NA	8421194	8421016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8421000_8421200
ES.1305.1	chr1	+	6302	1	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAGAAA	9621	False	NA	NA	False	NA	NA	NA	131928636	131934938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131928600_131934900
ES.13050.1	chr16	+	148	1	Intergenic	novelGene_10874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATACAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	8442450	8442598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8442400_8442600
ES.13051.1	chr16	-	2242	1	Intergenic	novelGene_10875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8445695	8443453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8443500_8445700
ES.13052.1	chr16	+	1965	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	-103	-20	-103	20	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGATCTTGCTGAT	NA	False	NA	37	True	AATAAA	-44	NA	8455434	8475415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.10	chr16	+	1665	8	NNC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.1176420241907	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTACATGATTGTGGC	NA	False	NA	9	True	AATAAA	-16	NA	8455619	8475387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8455693_8460601_8460714_8463232_8463315_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.11	chr16	+	4388	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	1	-2230	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCCTTCCTGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	8455620	8478101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.12	chr16	+	4409	7	NNC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	-2613	-11	intron_retention	FALSE	canonical	2	5	junction_4	68.5899652524575	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCAGTACATGATTGT	NA	False	NA	6	True	AATAAA	-13	NA	8461221	8475384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8464129_8466511_8466612_8466745_8466822_8468841_8468949_8469273_8469390_8473414_8473553_8474419
ES.13052.13	chr16	+	2722	3	ISM	ENSMUSG00000022711.17	ENSMUST00000131385.2	673	5	1325	-788	1325	-1	3prime_fragment	FALSE	canonical	3	154	junction_2	12.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTGTGGCCGAATCA	NA	False	NA	16	True	AATAAA	-23	NA	8467780	8475394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8469390_8473414_8473553_8474419
ES.13052.14	chr16	+	4208	1	NIC	ENSMUSG00000022711.17	novel	1796	9	NA	NA	4910	178	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAAAGTTGGATAAAGA	580	False	NA	NA	False	NA	NA	NA	8471365	8475573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8471400_8475600
ES.13052.2	chr16	+	2809	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	-84	960	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAAGCACACTGTAAGA	NA	False	NA	NA	False	AATAAA	-13	NA	8455453	8476355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.3	chr16	+	1714	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTGTGGCCGAATCA	NA	False	NA	16	True	AATAAA	-23	NA	8455587	8475394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.4	chr16	+	4315	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	3	6	intron_retention	FALSE	canonical	3	143	junction_4	22.3378511015884	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCCGAATCATACATGT	NA	False	NA	23	True	AATAAA	-30	NA	8455589	8475401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.5	chr16	+	2568	3	NNC	ENSMUSG00000022711.17	novel	2370	2	NA	NA	5	-315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	99.5	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACTTCTCAGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	8455591	8475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8455693_8460601_8462773_8474784
ES.13052.6	chr16	+	2516	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	6	2	intron_retention	FALSE	canonical	3	143	junction_4	22.4817386211247	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGGCCGAATCATAC	NA	False	NA	19	True	AATAAA	-26	NA	8455592	8475397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8460714_8463232_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.7	chr16	+	4483	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	64	-2705	0	-2231	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGCCTTCCTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	8455601	8478100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.8	chr16	+	5042	7	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	2	20	intron_retention	FALSE	canonical	3	143	junction_3	22.0636704914562	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGATCTTGCTGAT	NA	False	NA	37	True	AATAAA	-44	NA	8455603	8475415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8455693_8460601_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ES.13052.9	chr16	+	1983	11	NNC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	-7	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	74.2385344682935	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGATCTTGCTGAT	NA	False	NA	37	True	AATAAA	-44	NA	8455612	8475415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8468503_8468593_8468841_8468949_8469273_8469390_8473414_8473553_8474419
ES.13053.1	chr16	-	4621	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	-1256	26	1256	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGAAACAAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	8455550	8449836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13053.2	chr16	-	3652	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-261	0	-261	0	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGGTTTTTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	8455837	8451092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13053.3	chr16	-	4439	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	42	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCCAGGGTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	8455534	8451095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8451100_8455500
ES.13053.4	chr16	-	2852	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	44	495	44	-495	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTTTTTGTCCCTGC	NA	False	NA	NA	False	AGTAAA	-11	NA	8455532	8451587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13053.5	chr16	-	3002	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-259	648	-259	-648	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGGGTTAGTTCTT	NA	False	NA	NA	False	AATACA	-16	NA	8455835	8451740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13053.6	chr16	-	3813	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	20	-651	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTGTGGGTTAGTT	NA	False	NA	NA	False	AATACA	-13	NA	8455556	8451743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8451700_8455600
ES.13053.7	chr16	-	3399	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	183	-902	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGCGTTTCGTAGCT	NA	False	NA	-1	True	NA	NA	NA	8455393	8451994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8452000_8455400
ES.13053.8	chr16	-	2453	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	912	26	-912	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTAGCATATCCTTGCG	NA	False	NA	-11	True	NA	NA	NA	8455550	8452004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13053.9	chr16	-	1837	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	26	1528	26	-1528	multi-exon	FALSE	canonical	3	58	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTCTACCAGAATGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	8455550	8452620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8454257_8455349
ES.13054.1	chr16	-	183	1	Intergenic	novelGene_10876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8474218	8474035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8474000_8474200
ES.13055.1	chr16	-	2871	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	-13	0	13	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGTGTGTAGTTCTGG	NA	False	NA	2	True	AATAAA	-34	NA	8490019	8476430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ES.13055.4	chr16	-	2220	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	2	636	2	-636	multi-exon	FALSE	canonical	3	300	junction_3	44.5146667465405	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTCTTCTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	8490017	8477079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ES.13055.5	chr16	-	1845	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	1	1012	1	-1012	multi-exon	FALSE	canonical	3	300	junction_3	44.5146667465405	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGTTGGCTTTAGTTA	NA	False	NA	NA	False	AATGAA	-17	NA	8490018	8477455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ES.13055.6	chr16	-	1591	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	1267	0	-1267	multi-exon	FALSE	canonical	3	300	junction_3	44.5146667465405	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCGGCCTGCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	8490019	8477710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ES.13055.7	chr16	-	750	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	-7	2115	-7	-2115	multi-exon	FALSE	canonical	3	300	junction_3	44.5146667465405	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTGCGGAGGCTGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	8490026	8478558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ES.13056.1	chr16	+	181	1	Intergenic	novelGene_10877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8550263	8550444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8550300_8550400
ES.13056.2	chr16	+	174	2	Antisense	novelGene_ENSMUSG00000022710.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTCTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	8550266	8563421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8550391_8563371
ES.13056.3	chr16	+	176	2	Antisense	novelGene_ENSMUSG00000084737.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAGAAAAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	8550268	8587393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8550430_8587378
ES.13056.4	chr16	+	173	1	Intergenic	novelGene_10880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCCCTGGCC	NA	False	NA	NA	False	NA	NA	NA	8567645	8567818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8567600_8567800
ES.13056.5	chr16	+	175	1	Intergenic	novelGene_10882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAGAGAGACA	NA	False	NA	NA	False	NA	NA	NA	8583104	8583279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8583100_8583300
ES.13056.6	chr16	+	175	1	Intergenic	novelGene_10883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	8587221	8587396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8587200_8587400
ES.13057.1	chr16	+	141	1	Intergenic	novelGene_10884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTATAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	8590209	8590350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8590200_8590400
ES.13058.1	chr16	+	228	1	Intergenic	novelGene_10888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCATGGGCTACTCTAC	NA	False	NA	NA	False	NA	NA	NA	8605620	8605848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8605600_8605800
ES.13059.1	chr16	+	177	1	Intergenic	novelGene_10890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAATATGTTAG	NA	False	NA	NA	False	NA	NA	NA	8616737	8616914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8616700_8616900
ES.1306.1	chr1	+	1881	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	-30	2582	-30	205	multi-exon	FALSE	canonical	3	11	junction_4	2.9474565306379	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTAGCT	13	False	NA	NA	False	AAAAAG	-29	NA	131935314	131951604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
ES.1306.10	chr1	+	3827	1	NIC	ENSMUSG00000026436.16	novel	2107	4	NA	NA	10343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAGTGATTATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	131956523	131960350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_131956500_131960400
ES.1306.2	chr1	+	4668	6	FSM	ENSMUSG00000026436.16	ENSMUST00000027696.10	1586	6	-298	-2784	-29	-3	multi-exon	FALSE	canonical	1	1	junction_2	7.24982758415674	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAACCTTTCAGTGACT	14	False	NA	NA	False	NA	NA	NA	131935315	131954183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131935679_131940763_131940973_131942120_131942337_131945330_131946201_131947087_131947205_131951290
ES.1306.3	chr1	+	2416	7	NNC	ENSMUSG00000026436.16	novel	1586	6	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	6.16441400296898	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGACTTGGAGTGA	46	False	NA	NA	False	AATAAA	-8	NA	131935347	131960343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290_131951577_131959301_131959364_131959809
ES.1306.4	chr1	+	2123	6	NNC	ENSMUSG00000026436.16	novel	1586	6	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	8.05977667184395	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGACTTGGAGTGA	53	False	NA	NA	False	AATAAA	-8	NA	131935354	131960343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131959301_131959364_131959809
ES.1306.5	chr1	+	4419	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	14	0	14	0	multi-exon	FALSE	canonical	3	11	junction_4	2.9474565306379	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTTTCAGTGACTTCT	57	False	NA	NA	False	NA	NA	NA	131935358	131954186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
ES.1306.6	chr1	+	2605	6	Fusion	ENSMUSG00000026436.16_ENSMUSG00000100037.2	novel	2107	4	NA	NA	5	-7	multi-exon	FALSE	canonical	0	0	junction_1	6.61513416341649	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGACTTGGAGTGA	550	False	NA	NA	False	AATAAA	-8	NA	131935851	131960343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_131935926_131942120_131942337_131945330_131946201_131947087_131947205_131951290_131951577_131959301
ES.1306.7	chr1	+	2137	7	Fusion	ENSMUSG00000026436.16_ENSMUSG00000100037.2	novel	2107	4	NA	NA	15	-7	multi-exon	FALSE	canonical	0	0	junction_1	6.87184270936277	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGACTTGGAGTGA	560	False	NA	NA	False	AATAAA	-8	NA	131935861	131960343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_131935926_131942120_131942337_131945330_131946201_131947087_131947205_131951290_131951577_131959301_131959364_131959821
ES.1306.8	chr1	+	4578	5	Fusion	ENSMUSG00000026436.16_ENSMUSG00000100037.2	novel	2107	4	NA	NA	4046	0	intron_retention	FALSE	canonical	3	8	junction_4	4.27200187265877	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAGTGATTATTTC	4779	False	NA	NA	False	AATAAA	-15	NA	131940080	131960350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_131942337_131945330_131946201_131947087_131947205_131951290_131951577_131959301
ES.1306.9	chr1	+	343	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	5697	False	NA	NA	False	NA	NA	NA	131940998	131941341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_131941000_131941300
ES.13060.1	chr16	+	158	1	Intergenic	novelGene_10893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2969	False	NA	NA	False	NA	NA	NA	8622773	8622931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8622800_8622900
ES.13061.1	chr16	+	1497	1	Intergenic	novelGene_10895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	9155	False	NA	NA	False	NA	NA	NA	8628959	8630456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8629000_8630500
ES.13062.1	chr16	-	4764	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-22	16890	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	241.18651204773	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTTGGTGCCCACAC	NA	False	NA	NA	False	AATAAA	-12	NA	8610194	8490568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8490577_8507468_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510882_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.10	chr16	-	5598	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	872	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTTGTAGTGTTTCT	NA	False	NA	-4	True	ATTAAA	-16	NA	8601247	8506586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.102	chr16	-	4777	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-508	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	6024	False	NA	NA	False	AATAAA	-15	NA	8556792	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556286_8556637
ES.13062.104	chr16	-	4889	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-546	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	5986	False	NA	NA	False	AATAAA	-15	NA	8556830	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556324_8556601
ES.13062.105	chr16	-	5445	27	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-11	-6	intron_retention	FALSE	canonical	0	0	junction_6	326.491364275911	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	8610183	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8511060_8511565_8511644_8511737_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514690_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8610099
ES.13062.106	chr16	-	5022	33	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-527	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	242.323419521179	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	6005	False	NA	NA	False	AATAAA	-15	NA	8556811	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556287_8556345_8556432_8556498
ES.13062.107	chr16	-	4930	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_32	231.442892524268	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	8610177	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930_8582122_8610099
ES.13062.108	chr16	-	6002	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-9887	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	318.826827444676	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	8566171	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510883_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8564650_8565149_8565244
ES.13062.109	chr16	-	8622	25	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-40	-6	intron_retention	FALSE	canonical	2	419	junction_24	140.106897433115	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	8610212	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8511644_8511733_8511843_8512276_8514609_8514690_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.11	chr16	-	5793	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-25723	869	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_32	257.477409127359	1321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTTCTTGTAGTGTT	NA	False	NA	-7	True	ATTAAA	-13	NA	8582007	8506589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8581930
ES.13062.113	chr16	-	5230	24	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-819	-6	intron_retention	FALSE	canonical	2	677	junction_5	86.8454943366577	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATCCGATGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	8525610	8507469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8524005_8524462_8524594_8525501
ES.13062.116	chr16	-	5954	31	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	-8	intron_retention	FALSE	canonical	0	0	junction_5	274.31058836452	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATAATCCGATGACTGC	6007	False	NA	NA	False	AATAAA	-13	NA	8556809	8507471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510877_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.118	chr16	-	4800	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	198.074403451858	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610236	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515749_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.119	chr16	-	5002	31	FSM	ENSMUSG00000022710.18	ENSMUST00000160326.8	4488	31	-525	11	-525	-11	multi-exon	FALSE	canonical	2	14	junction_28	198.142330998031	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6007	False	NA	NA	False	AATAAA	-10	NA	8556809	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8534378_8534484_8556067
ES.13062.120	chr16	-	3745	18	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-1281	-11	intron_retention	FALSE	non_canonical	0	0	junction_5	304.037752618488	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8517975	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510877_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513781_8514540_8514609_8514690_8514784_8515459_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909
ES.13062.121	chr16	-	5285	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-6	-11	intron_retention	FALSE	canonical	2	419	junction_30	129.243220325091	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610178	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.122	chr16	-	4961	33	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-57	-11	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	226.28742784344	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610229	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.123	chr16	-	3240	21	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	8910	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	322.804317660096	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601262	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516674_8529996_8530057_8534378_8534486_8574796_8574937_8601193
ES.13062.124	chr16	-	6615	28	NIC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-11	intron_retention	FALSE	canonical	2	328	junction_27	131.402501056679	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6007	False	NA	NA	False	AATAAA	-10	NA	8556809	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8516715_8517006_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.125	chr16	-	5034	30	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	5034	-11	intron_retention	FALSE	canonical	2	74	junction_29	218.908377013658	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8534486	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378
ES.13062.126	chr16	-	6187	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	26711	-11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_31	182.773145983812	1321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8583461	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930
ES.13062.128	chr16	-	5777	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-11	-11	intron_retention	FALSE	canonical	2	24	junction_30	262.903237374937	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610183	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574932_8610099
ES.13062.129	chr16	-	5500	29	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-18707	-11	intron_retention	FALSE	canonical	1	2	junction_15	190.698163443742	1316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8574991	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679
ES.13062.13	chr16	-	12209	20	NIC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-499	869	intron_retention	FALSE	canonical	2	328	junction_19	147.726388545094	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTTCTTGTAGTGTT	6033	False	NA	-7	True	ATTAAA	-13	NA	8556783	8506589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8511644_8511733_8511843_8512276_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.130	chr16	-	5538	29	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	20	-11	intron_retention	FALSE	canonical	2	24	junction_28	181.671884091589	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610152	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574932_8610099
ES.13062.131	chr16	-	4671	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-498	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6034	False	NA	NA	False	AATAAA	-10	NA	8556782	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556162_8556604
ES.13062.132	chr16	-	5404	9	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	43	-11	intron_retention	FALSE	canonical	2	677	junction_3	109.358355876449	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8515402	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8514609_8514690
ES.13062.133	chr16	-	5043	34	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	307.39838145629	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601265	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523333_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8601193
ES.13062.138	chr16	-	5097	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-485	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.585117490936	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6047	False	NA	NA	False	AATAAA	-10	NA	8556769	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510336_8510877_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.139	chr16	-	4780	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	183.656094029274	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601265	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601141
ES.13062.14	chr16	-	5850	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	867	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_31	182.920173305979	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAACTTCTTGTAGTG	NA	False	NA	-9	True	ATTAAA	-11	NA	8601265	8506591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8600954
ES.13062.141	chr16	-	5166	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	-11	intron_retention	FALSE	canonical	0	0	junction_21	267.100451899256	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610171	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522963_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.143	chr16	-	4586	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6007	False	NA	NA	False	AATAAA	-10	NA	8556809	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556226_8556780
ES.13062.144	chr16	-	5916	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-515	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	344.755348036836	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6017	False	NA	NA	False	AATAAA	-10	NA	8556799	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512272_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8528595_8528777_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.145	chr16	-	5109	34	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-501	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	320.106872075633	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6031	False	NA	NA	False	AATAAA	-10	NA	8556785	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523388_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556326_8556593
ES.13062.146	chr16	-	5610	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	-11	intron_retention	FALSE	canonical	2	100	junction_30	171.907239198612	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601246	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.147	chr16	-	4771	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-491	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6041	False	NA	NA	False	AATAAA	-10	NA	8556775	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556332_8556667
ES.13062.148	chr16	-	4969	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8905	-11	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_31	182.920173305979	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601267	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8600954
ES.13062.15	chr16	-	4861	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-114	-2	-114	2	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTGGAAGCCGAGGG	NA	False	NA	NA	False	AATAAA	-28	NA	8610286	8507456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.150	chr16	-	3744	6	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	2752	-11	intron_retention	FALSE	canonical	3	856	junction_3	74.4301014375232	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8512693	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8511644_8511733_8511843_8512276
ES.13062.151	chr16	-	4654	32	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-11	combination_of_known_junctions	FALSE	canonical	2	14	junction_28	195.70993529229	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610236	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.152	chr16	-	5070	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-507	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	200.359368801827	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6025	False	NA	NA	False	AATAAA	-10	NA	8556791	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511656_8511798_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.153	chr16	-	3423	21	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-494	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	301.706380442973	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6038	False	NA	NA	False	AATAAA	-10	NA	8556778	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8529996_8530057_8534378_8534484_8556067_8556318_8556631
ES.13062.154	chr16	-	4825	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	239.035919682456	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610183	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523388_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.157	chr16	-	5001	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-13	-11	intron_retention	FALSE	non_canonical	0	0	junction_4	244.286464354181	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610185	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510882_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514539_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.158	chr16	-	4998	26	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-3149	-11	intron_retention	FALSE	non_canonical	0	0	junction_6	189.002501570746	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8527940	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511748_8511843_8512276_8512345_8512894_8513049_8513679_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902
ES.13062.159	chr16	-	4825	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-484	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6048	False	NA	NA	False	AATAAA	-10	NA	8556768	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556334_8556608
ES.13062.16	chr16	-	5295	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-524	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_32	296.944695766316	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCTGTGGAAGCCGAG	6008	False	NA	NA	False	AATAAA	-26	NA	8556808	8507458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556320_8556780
ES.13062.163	chr16	-	5822	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	-11	intron_retention	FALSE	canonical	2	100	junction_30	171.751939985809	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601247	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.165	chr16	-	3545	21	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-514	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	302.09681808983	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6018	False	NA	NA	False	AATAAA	-10	NA	8556798	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516674_8529996_8530057_8534378_8534484_8556067_8556323_8556537
ES.13062.166	chr16	-	4829	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	270.527131191933	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610171	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510882_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930_8582033_8610099
ES.13062.167	chr16	-	4926	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-490	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6042	False	NA	NA	False	AATAAA	-10	NA	8556774	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556463_8556642
ES.13062.172	chr16	-	6142	30	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-484	-11	intron_retention	FALSE	canonical	2	74	junction_28	236.738771931327	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6048	False	NA	NA	False	AATAAA	-10	NA	8556768	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.174	chr16	-	2813	16	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-57	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	243.986192687665	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8516453	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512858_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315
ES.13062.175	chr16	-	4766	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8905	-11	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_28	283.467919743024	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601267	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8601193
ES.13062.176	chr16	-	4833	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-63	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	232.316325298073	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610235	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8585740_8585782_8610099
ES.13062.18	chr16	-	5782	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-1229	-550	-1151	-1	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGCTGTGGAAGCCGA	5381	False	NA	NA	False	AATAAA	-25	NA	8557435	8507459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.180	chr16	-	5108	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-497	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	243.904965554665	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	6035	False	NA	NA	False	AATAAA	-10	NA	8556781	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511837_8512276_8512345_8512894_8513049_8513679_8513781_8514539_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.181	chr16	-	3014	19	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-11	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	282.865938014617	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8601265	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8574855_8574937_8601193
ES.13062.183	chr16	-	4757	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-30	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	194.568088069193	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8610202	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511837_8512272_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.184	chr16	-	4451	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-10077	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	177.502553972236	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8566361	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8566309
ES.13062.186	chr16	-	4796	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-18976	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	183.656094029274	1316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAATCCGATGAC	NA	False	NA	NA	False	AATAAA	-10	NA	8575260	8507474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8575120
ES.13062.190	chr16	-	4627	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8935	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	265.517334150996	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATTATAATCCGATG	NA	False	NA	NA	False	AATAAA	-8	NA	8601237	8507476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510882_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516385_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.191	chr16	-	9189	24	NIC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-15	intron_retention	FALSE	canonical	2	328	junction_23	139.045164086906	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAAAAATTATAATCCGA	6007	False	NA	NA	False	AATAAA	-6	NA	8556809	8507478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.192	chr16	-	4945	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-675	-267	-597	267	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGCCGTTTTCTATTGG	5935	False	NA	NA	False	AATGAA	-26	NA	8556881	8507742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.193	chr16	-	4497	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-522	226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATATTTAATGAATGAA	6010	False	NA	NA	False	NA	NA	NA	8556806	8507783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556326_8556657
ES.13062.194	chr16	-	4484	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-64	325	-64	226	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATATTTAATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	8610236	8507783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.196	chr16	-	4353	32	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	294	223	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_31	256.739821820108	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTATATTTAATGAAT	6904	False	NA	NA	False	NA	NA	NA	8555912	8507786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8555821
ES.13062.197	chr16	-	5006	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-529	221	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	6003	False	NA	NA	False	NA	NA	NA	8556813	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.198	chr16	-	4645	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	231.661989423708	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8601247	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930_8582180_8601193
ES.13062.199	chr16	-	4819	34	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	287.493116458498	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8601246	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8581930_8582180_8601193
ES.13062.2	chr16	-	7915	5	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-233	875	intron_retention	FALSE	canonical	2	677	junction_2	146.797479542395	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTAGTGTTTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	8515678	8506583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8510344_8510881_8511644_8511733_8511843_8512276
ES.13062.20	chr16	-	4755	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8895	-1	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGCTGTGGAAGCCGA	NA	False	NA	NA	False	AATAAA	-25	NA	8601277	8507459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.201	chr16	-	4432	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8889	221	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8601283	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.202	chr16	-	4529	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-18975	221	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_31	183.361569420854	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8575259	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8575072
ES.13062.203	chr16	-	4611	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-507	221	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	6025	False	NA	NA	False	NA	NA	NA	8556791	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556298_8556495
ES.13062.206	chr16	-	4685	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	266.580011148154	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	6007	False	NA	NA	False	NA	NA	NA	8556809	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556326_8556642
ES.13062.207	chr16	-	4853	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-13	221	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	193.920658115944	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8610185	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.208	chr16	-	4867	30	NIC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-480	221	intron_retention	FALSE	canonical	2	328	junction_29	129.988172881919	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	6052	False	NA	NA	False	NA	NA	NA	8556764	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.209	chr16	-	4838	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	221	intron_retention	FALSE	non_canonical	0	0	junction_18	285.750620775657	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8601246	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518076_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8601193
ES.13062.21	chr16	-	5704	30	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	-2	intron_retention	FALSE	canonical	0	0	junction_24	231.373868068994	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCTGTGGAAGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	8601246	8507460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8525501_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.210	chr16	-	4434	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-13	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	194.100518923598	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8610185	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509212_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.212	chr16	-	4654	33	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	221	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	226.28742784344	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8610236	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.214	chr16	-	4633	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8927	221	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_31	182.920173305979	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8601245	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8600954
ES.13062.215	chr16	-	4526	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-532	221	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	6000	False	NA	NA	False	NA	NA	NA	8556816	8507788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556324_8556631
ES.13062.216	chr16	-	4667	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	0	214	intron_retention	FALSE	canonical	2	419	junction_30	127.736103832167	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAATGAAATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	8610172	8507795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.217	chr16	-	5756	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	214	intron_retention	FALSE	canonical	2	31	junction_21	270.384501939162	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAATGAAATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	8610171	8507795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.218	chr16	-	4695	34	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	291.543449769953	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8610171	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523333_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.219	chr16	-	4217	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-40	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	236.807753720655	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8610212	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8534378_8534484_8574679_8574932_8610099
ES.13062.22	chr16	-	4700	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-531	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCTGTGGAAGCCG	6001	False	NA	NA	False	AATAAA	-24	NA	8556815	8507460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556320_8556780
ES.13062.222	chr16	-	4963	9	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-350	187	intron_retention	FALSE	canonical	2	677	junction_4	113.957228818535	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8515795	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509540_8510243_8510344_8510881_8511644_8511733_8511843_8512276_8514784_8515453_8515560_8515756
ES.13062.223	chr16	-	4445	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-497	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	6035	False	NA	NA	False	NA	NA	NA	8556781	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556333_8556652
ES.13062.225	chr16	-	5359	32	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-491	187	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	267.949126983845	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	6041	False	NA	NA	False	NA	NA	NA	8556775	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.226	chr16	-	3406	24	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-169	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	199.458795153493	1271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8523342	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523160
ES.13062.227	chr16	-	4651	34	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	267.298487042838	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8601246	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930_8582180_8585740_8585782_8601193
ES.13062.229	chr16	-	4342	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-479	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	6053	False	NA	NA	False	NA	NA	NA	8556763	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556238_8556642
ES.13062.23	chr16	-	5342	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-2	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	281.991811646965	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCTGTGGAAGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	8601265	8507460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8601193
ES.13062.234	chr16	-	1699	3	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	5102	187	intron_retention	FALSE	canonical	3	856	junction_2	93	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8510343	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509540_8510243
ES.13062.236	chr16	-	4475	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-488	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	6044	False	NA	NA	False	NA	NA	NA	8556772	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556321_8556601
ES.13062.24	chr16	-	4736	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-414	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCTGTGGAAGCCG	6118	False	NA	NA	False	AATAAA	-24	NA	8556698	8507460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556335_8556642
ES.13062.240	chr16	-	5034	30	NIC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-507	187	intron_retention	FALSE	canonical	2	328	junction_29	127.489478710701	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAATAAAAAA	6025	False	NA	NA	False	NA	NA	NA	8556791	8507822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.241	chr16	-	4451	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-499	185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	246.077401256087	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAAAAAGATAAAATAAAA	6033	False	NA	NA	False	NA	NA	NA	8556783	8507824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527904_8528042_8529857_8530057_8534378_8534484_8556067_8556331_8556642
ES.13062.245	chr16	-	3862	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-482	211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATGAGAGTTCTTTT	6050	False	NA	NA	False	TATAAA	-7	NA	8556766	8508432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556324_8556601
ES.13062.247	chr16	-	3778	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-321	207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGCCAATGAGAGTTC	6211	False	NA	NA	False	TATAAA	-3	NA	8556605	8508436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556296_8556492
ES.13062.25	chr16	-	5068	30	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_23	202.646614618086	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCTGTGGAAGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	8610171	8507460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.250	chr16	-	3758	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-5	205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	197.977331867572	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	NA	False	NA	NA	False	TATAAA	-1	NA	8610177	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522803_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.251	chr16	-	3997	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-489	205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	6043	False	NA	NA	False	TATAAA	-1	NA	8556773	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556306_8556449
ES.13062.253	chr16	-	5282	29	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	5776	205	intron_retention	FALSE	canonical	2	80	junction_28	169.536959428453	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	NA	False	NA	NA	False	TATAAA	-1	NA	8533744	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8530057_8533608
ES.13062.254	chr16	-	3856	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-91	980	-91	205	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	NA	False	NA	NA	False	TATAAA	-1	NA	8610263	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.255	chr16	-	3742	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	200.698269936628	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	NA	False	NA	NA	False	TATAAA	-1	NA	8610236	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8524494_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.256	chr16	-	3782	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-494	205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	6038	False	NA	NA	False	TATAAA	-1	NA	8556778	8508438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556162_8556525
ES.13062.258	chr16	-	3873	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-535	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	5997	False	NA	NA	False	AATGAA	-12	NA	8556819	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556332_8556642
ES.13062.259	chr16	-	3940	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-523	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	266.580011148154	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6009	False	NA	NA	False	AATGAA	-12	NA	8556807	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556312_8556718
ES.13062.26	chr16	-	4747	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-538	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGACTGCTGTGGAAGCC	5994	False	NA	NA	False	AATAAA	-23	NA	8556822	8507461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556334_8556753
ES.13062.261	chr16	-	4064	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-549	202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_32	266.580011148154	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	5983	False	NA	NA	False	AATGAA	-12	NA	8556833	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556323_8556631
ES.13062.264	chr16	-	4163	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8930	202	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	221.766036213614	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	NA	False	NA	NA	False	AATGAA	-12	NA	8601242	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.265	chr16	-	4161	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-516	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.585117490936	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6016	False	NA	NA	False	AATGAA	-12	NA	8556800	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510336_8510877_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.266	chr16	-	3808	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-490	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6042	False	NA	NA	False	AATGAA	-12	NA	8556774	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556324_8556654
ES.13062.267	chr16	-	2506	8	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	2214	202	intron_retention	FALSE	canonical	3	856	junction_4	64.5439258749182	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	NA	False	NA	NA	False	AATGAA	-12	NA	8513231	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8511644_8511733_8511843_8512276_8512345_8512894
ES.13062.269	chr16	-	4127	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-484	202	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	196.202786252727	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6048	False	NA	NA	False	AATGAA	-12	NA	8556768	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511837_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.27	chr16	-	4799	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-484	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGACTGCTGTGGAAGCC	6048	False	NA	NA	False	AATAAA	-23	NA	8556768	8507461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556329_8556642
ES.13062.270	chr16	-	3794	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-482	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6050	False	NA	NA	False	AATGAA	-12	NA	8556766	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556239_8556575
ES.13062.271	chr16	-	2761	20	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-485	202	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	247.928738309576	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTGGATGCCAATGAG	6047	False	NA	NA	False	AATGAA	-12	NA	8556769	8508441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8529996_8530057_8534378_8534484_8556067
ES.13062.273	chr16	-	4424	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-63	201	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	263.170542376992	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTGGATGCCAATGA	NA	False	NA	NA	False	AATGAA	-11	NA	8610235	8508442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.274	chr16	-	3953	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-549	200	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTTGGATGCCAATG	5983	False	NA	NA	False	AATGAA	-10	NA	8556833	8508443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556333_8556575
ES.13062.277	chr16	-	3601	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-40	1184	-40	1	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCGTGTCCAAGGC	NA	False	NA	NA	False	ATTAAA	-14	NA	8610212	8508642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.278	chr16	-	3420	30	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-576	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_29	179.452874387791	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTGTGCTTGAGAGCC	NA	False	NA	NA	False	NA	NA	NA	8610236	8509219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574932_8610099
ES.13062.279	chr16	-	3591	28	ISM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-574	1492	-496	-858	5prime_fragment	FALSE	canonical	2	328	junction_27	123.976943739048	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATGCTAATCACAGTGG	6036	False	NA	NA	False	NA	NA	NA	8556780	8509501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.280	chr16	-	3004	21	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-38	12	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_20	197.252224322059	1239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTCGTATGAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	8610210	8514028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574932_8610099
ES.13062.281	chr16	-	2324	11	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	353.756144822956	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAGAAAAACAGTA	6007	False	NA	NA	False	NA	NA	NA	8556809	8522808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.282	chr16	-	1446	7	ISM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-568	16486	-490	-672	5prime_fragment	FALSE	canonical	3	328	junction_6	202.521946684523	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGTAGGAACAAAAAAGCTCA	6042	False	NA	NA	False	NA	NA	NA	8556774	8524495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.283	chr16	-	2731	2	Intergenic	novelGene_10878	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	499	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAAGAAGAAAGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	8565193	8562111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8563348_8563698
ES.13062.284	chr16	-	603	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-42821	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	15	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8601265	8566644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8566919_8574679_8574937_8601193
ES.13062.285	chr16	-	824	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	-42821	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	32.5	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8601247	8566644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8566919_8574679_8574937_8600954
ES.13062.286	chr16	-	668	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-42821	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	174.5	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8610236	8566644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8566919_8574679_8574937_8610099
ES.13062.287	chr16	-	157	2	Intergenic	novelGene_10879	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	4471	False	NA	NA	False	NA	NA	NA	8633211	8566644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8566709_8633118
ES.13062.289	chr16	-	6061	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	28	-42821	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	209.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8610144	8566644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8566726_8569001_8574937_8610099
ES.13062.29	chr16	-	5351	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-549	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	5983	False	NA	NA	False	AATAAA	-21	NA	8556833	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.290	chr16	-	3223	2	ISM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-6	64334	-6	-47969	5prime_fragment	FALSE	canonical	3	419	junction_1	0	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGAAAGTGGACTCTT	NA	False	NA	NA	False	NA	NA	NA	8610178	8571792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_8574937_8610099
ES.13062.291	chr16	-	5331	1	FSM	ENSMUSG00000084737.3	ENSMUST00000122788.3	108	1	59	-5282	59	5282	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	8584081	8578750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8578800_8584100
ES.13062.292	chr16	-	1610	2	Intergenic	novelGene_10881	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	8585548	8578761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8580328_8585504
ES.13062.293	chr16	-	171	1	Intergenic	novelGene_10885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTATAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8590541	8590370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8590400_8590500
ES.13062.294	chr16	-	3810	1	Intergenic	novelGene_10886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8601258	8597448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8597400_8601300
ES.13062.295	chr16	-	345	1	Intergenic	novelGene_10887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8601247	8600902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8600900_8601200
ES.13062.296	chr16	-	156	1	Intergenic	novelGene_10889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	8611139	8610983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8611000_8611100
ES.13062.297	chr16	-	272	1	Intergenic	novelGene_10891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTGGACTTGTAACAT	2568	False	NA	NA	False	NA	NA	NA	8621362	8621090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8621100_8621400
ES.13062.298	chr16	-	157	1	Intergenic	novelGene_10892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	2570	False	NA	NA	False	NA	NA	NA	8621360	8621203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8621200_8621400
ES.13062.299	chr16	-	160	1	Intergenic	novelGene_10894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9365	False	NA	NA	False	NA	NA	NA	8628317	8628157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8628200_8628300
ES.13062.3	chr16	-	5703	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-507	875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTAGTGTTTCTTGT	6025	False	NA	-1	True	ATTAAA	-19	NA	8556791	8506583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556332_8556642
ES.13062.30	chr16	-	6443	28	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	0	intron_retention	FALSE	canonical	2	24	junction_27	189.722416535519	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8610171	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574932_8610099
ES.13062.31	chr16	-	4693	32	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-525	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6007	False	NA	NA	False	AATAAA	-21	NA	8556809	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556333_8556791
ES.13062.34	chr16	-	4828	32	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-496	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6036	False	NA	NA	False	AATAAA	-21	NA	8556780	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556235_8556529
ES.13062.35	chr16	-	6772	5	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	486	0	intron_retention	FALSE	canonical	3	892	junction_2	65.471367787759	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8514959	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8509101_8509218_8511644_8511733_8511843_8512276_8514609_8514690
ES.13062.36	chr16	-	8316	24	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-487	0	intron_retention	FALSE	canonical	2	328	junction_23	138.674606553743	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6045	False	NA	NA	False	AATAAA	-21	NA	8556771	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.37	chr16	-	4916	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-522	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_32	266.580011148154	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6010	False	NA	NA	False	AATAAA	-21	NA	8556806	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556330_8556737
ES.13062.38	chr16	-	4523	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	177.502553972236	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8610212	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8610099
ES.13062.39	chr16	-	4817	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	21085	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	231.661989423708	1322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8589087	8507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8581930_8582033_8589039
ES.13062.4	chr16	-	6038	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	-609	-1426	-531	875	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTAGTGTTTCTTGT	6001	False	NA	-1	True	ATTAAA	-19	NA	8556815	8506583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.40	chr16	-	5191	23	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-755	-1	intron_retention	FALSE	canonical	2	677	junction_5	88.2713697114971	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGATGACTGCTGTGGAA	NA	False	NA	NA	False	AATAAA	-20	NA	8525546	8507464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8513781_8514540_8514609_8514690_8514784_8515453_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501
ES.13062.41	chr16	-	6148	29	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-29	-1	intron_retention	FALSE	canonical	0	0	junction_21	280.005801233635	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGATGACTGCTGTGGAA	NA	False	NA	NA	False	AATAAA	-20	NA	8610201	8507464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.42	chr16	-	5281	32	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	270.614912377808	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCGATGACTGCTGTGGA	6007	False	NA	NA	False	AATAAA	-19	NA	8556809	8507465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.43	chr16	-	4781	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	196.291645236353	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCGATGACTGCTGTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	8610236	8507465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513770_8514550_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.46	chr16	-	7417	28	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-496	-3	intron_retention	TRUE	non_canonical	0	0	junction_27	284.387354417417	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6036	False	NA	NA	False	AATAAA	-18	NA	8556780	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8515560_8515756_8515859_8516315_8516451_8516583_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556319_8556631
ES.13062.48	chr16	-	5539	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-490	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	268.362747034378	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6042	False	NA	NA	False	AATAAA	-18	NA	8556774	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8555821_8556336_8556581
ES.13062.5	chr16	-	5698	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	-78	-875	-78	875	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTAGTGTTTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	8610250	8506583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.50	chr16	-	8365	30	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-63	-3	intron_retention	FALSE	canonical	2	31	junction_21	200.384564876304	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610235	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8519936_8521327_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.51	chr16	-	4461	30	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-62	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_27	204.01916395962	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610234	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8534378_8534484_8574679_8574937_8610099
ES.13062.53	chr16	-	5105	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-490	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	200.077607165042	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6042	False	NA	NA	False	AATAAA	-18	NA	8556774	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525510_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.54	chr16	-	4596	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	36	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	193.524069705956	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610136	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8574679_8574937_8610099
ES.13062.55	chr16	-	5260	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-496	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	242.964718258471	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6036	False	NA	NA	False	AATAAA	-18	NA	8556780	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523333_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.57	chr16	-	4930	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6007	False	NA	NA	False	AATAAA	-18	NA	8556809	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556432_8556650
ES.13062.58	chr16	-	4907	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-467	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6065	False	NA	NA	False	AATAAA	-18	NA	8556751	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556327_8556510
ES.13062.6	chr16	-	6375	31	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-496	875	intron_retention	FALSE	canonical	2	74	junction_29	233.724293892517	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTAGTGTTTCTTGT	6036	False	NA	-1	True	ATTAAA	-19	NA	8556780	8506583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.60	chr16	-	5371	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	263.170542376992	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610206	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.61	chr16	-	4664	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	418	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_30	176.865048993733	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	7028	False	NA	NA	False	AATAAA	-18	NA	8555788	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8555531
ES.13062.62	chr16	-	5156	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-568	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	242.964718258471	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	5964	False	NA	NA	False	AATAAA	-18	NA	8556852	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556320_8556780
ES.13062.64	chr16	-	5080	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-48	-3	intron_retention	FALSE	canonical	2	14	junction_27	195.43343282731	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610220	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.65	chr16	-	4945	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-480	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	266.580011148154	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6052	False	NA	NA	False	AATAAA	-18	NA	8556764	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556327_8556660
ES.13062.66	chr16	-	4999	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	200.556118497209	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6007	False	NA	NA	False	AATAAA	-18	NA	8556809	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517115_8518022_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.67	chr16	-	5407	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-537	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_30	175.909954869593	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	5995	False	NA	NA	False	AATAAA	-18	NA	8556821	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8555821
ES.13062.68	chr16	-	3049	19	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	293.853290219524	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610203	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516671_8574855_8574932_8610099
ES.13062.7	chr16	-	5872	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-191	874	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGTAGTGTTTCTTG	6341	False	NA	-2	True	ATTAAA	-18	NA	8556475	8506584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.70	chr16	-	4855	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-549	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	245.513876340109	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	5983	False	NA	NA	False	AATAAA	-18	NA	8556833	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519933_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556313_8556627
ES.13062.71	chr16	-	5036	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-490	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	200.185980195084	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6042	False	NA	NA	False	AATAAA	-18	NA	8556774	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519896_8521365_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.72	chr16	-	4891	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8927	-3	at_least_one_novel_splicesite	FALSE	canonical	2	74	junction_30	248.902840529066	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8601245	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8601193
ES.13062.73	chr16	-	4763	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8926	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	232.288662858995	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8601246	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509224_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601141
ES.13062.74	chr16	-	6436	31	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	307.986877426079	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6007	False	NA	NA	False	AATAAA	-18	NA	8556809	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510882_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524006_8524462_8524594_8525501_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.75	chr16	-	5216	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	-3	intron_retention	FALSE	canonical	2	5	junction_30	183.462563544234	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8601247	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8600954
ES.13062.76	chr16	-	4920	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-496	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6036	False	NA	NA	False	AATAAA	-18	NA	8556780	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556329_8556528
ES.13062.77	chr16	-	4600	31	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	236.141221870868	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610171	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574932_8610099
ES.13062.78	chr16	-	6010	31	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-48	-3	intron_retention	FALSE	canonical	2	74	junction_28	233.395422691477	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	8610220	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.79	chr16	-	5007	33	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-525	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	266.580011148154	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCGATGACTGCTGTGG	6007	False	NA	NA	False	AATAAA	-18	NA	8556809	8507466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556326_8556642
ES.13062.8	chr16	-	6460	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	1	872	intron_retention	FALSE	canonical	0	0	junction_1	268.295424790621	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTTGTAGTGTTTCT	NA	False	NA	-4	True	ATTAAA	-16	NA	8610171	8506586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8507314_8508664_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8574679_8574937_8610099
ES.13062.80	chr16	-	5311	32	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-505	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	270.660813111951	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCGATGACTGCTGTG	6027	False	NA	NA	False	AATAAA	-17	NA	8556789	8507467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519817_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.81	chr16	-	4490	31	NNC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-527	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	249.859871839308	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCGATGACTGCTGTG	6005	False	NA	NA	False	AATAAA	-17	NA	8556811	8507467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8534378_8534484_8556067_8556320_8556780
ES.13062.83	chr16	-	4799	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-491	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCGATGACTGCTGTG	6041	False	NA	NA	False	AATAAA	-17	NA	8556775	8507467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556323_8556637
ES.13062.84	chr16	-	6068	30	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-522	-5	intron_retention	FALSE	canonical	2	74	junction_28	236.767690696825	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6010	False	NA	NA	False	AATAAA	-16	NA	8556806	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8516451_8516583_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
ES.13062.85	chr16	-	8820	28	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-496	-5	intron_retention	FALSE	canonical	2	10	junction_27	239.510377333593	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6036	False	NA	NA	False	AATAAA	-16	NA	8556780	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8555821
ES.13062.86	chr16	-	4828	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-66	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	198.075086404925	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8610238	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516447_8516552_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.87	chr16	-	5213	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-53	-5	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	193.920658115944	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8610225	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ES.13062.88	chr16	-	4834	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-538	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	5994	False	NA	NA	False	AATAAA	-16	NA	8556822	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556332_8556657
ES.13062.89	chr16	-	4864	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-494	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6038	False	NA	NA	False	AATAAA	-16	NA	8556778	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556324_8556575
ES.13062.90	chr16	-	3735	25	NIC	ENSMUSG00000022710.18	novel	4488	31	NA	NA	-816	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	196.533712120847	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8525607	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501
ES.13062.91	chr16	-	4715	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-62	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	257.735592800152	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8610234	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8610099
ES.13062.92	chr16	-	4520	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-1020	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	177.502553972236	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	5512	False	NA	NA	False	AATAAA	-16	NA	8557304	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8557189
ES.13062.94	chr16	-	4815	32	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-525	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	197.40251878453	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6007	False	NA	NA	False	AATAAA	-16	NA	8556809	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067_8556326_8556657
ES.13062.95	chr16	-	5773	30	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-529	-5	intron_retention	FALSE	canonical	2	31	junction_22	199.724417746041	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6003	False	NA	NA	False	AATAAA	-16	NA	8556813	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.96	chr16	-	4828	33	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8925	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	261.360291835691	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8601247	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514299_8514412_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
ES.13062.97	chr16	-	5061	34	NNC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-498	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	322.215260366197	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6034	False	NA	NA	False	AATAAA	-16	NA	8556782	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523333_8523411_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067_8556332_8556642
ES.13062.98	chr16	-	5135	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-507	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.854963530683	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	6025	False	NA	NA	False	AATAAA	-16	NA	8556791	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509212_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ES.13062.99	chr16	-	5101	34	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8940	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	328.989729967734	1332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCCGATGACTGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	8601232	8507468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526727_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8544441_8544672_8574679_8574937_8601193
ES.13063.1	chr16	-	181	1	Intergenic	novelGene_10896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGACTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	8642207	8642026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8642000_8642200
ES.13064.1	chr16	+	3407	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-49	714	-49	-714	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTTCCATTGCATT	9895	False	NA	29	True	ATTAAA	-24	NA	8647914	8676072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.10	chr16	+	3943	4	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.5299698156255	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACAGGGGCTTGTCTGT	9939	False	NA	9	True	AATAAA	-20	NA	8647958	8676785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8660975_8673657
ES.13064.11	chr16	+	2385	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-2	1689	-2	-1689	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAGACCTCTTGTAG	9942	False	NA	NA	False	AATAAA	-24	NA	8647961	8675097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.12	chr16	+	1849	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	1	2222	1	-2222	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTTGTGTGTGTTAG	9945	False	NA	12	True	AATACA	-15	NA	8647964	8674564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.13	chr16	+	3392	4	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	18	-722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.0215658916411	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGTTACTTTTTTCC	9962	False	NA	21	True	ATTAAA	-16	NA	8647981	8676064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649124_8649266_8660831_8661108_8673657
ES.13064.14	chr16	+	9269	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	18	-7222	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	93.7669984589461	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGGGTGGGGAGTGGT	9962	False	NA	13	True	AATAAA	-21	NA	8647981	8669564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8662481_8662520_8663128_8663200
ES.13064.16	chr16	+	4807	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	26	11789	26	3002	5prime_fragment	FALSE	canonical	3	177	junction_1	10	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGTACTTTGGTTT	9970	False	NA	NA	False	TATAAA	-21	NA	8647989	8664997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8648550_8649184_8649266_8660831
ES.13064.17	chr16	+	3851	4	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.5299698156255	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACAGGGGCTTGTCTGT	9971	False	NA	9	True	AATAAA	-20	NA	8647990	8676785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8660915_8673657
ES.13064.18	chr16	+	1163	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	30	2879	30	-2879	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATTTTCACACCCACCA	9974	False	NA	NA	False	CATAAA	-24	NA	8647993	8673907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.19	chr16	+	3359	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	36	-722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.7669984589461	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGTTACTTTTTTCC	9980	False	NA	21	True	ATTAAA	-16	NA	8647999	8676064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8661108_8663640_8663686_8673657
ES.13064.2	chr16	+	1239	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-48	15431	-48	-640	5prime_fragment	FALSE	canonical	3	177	junction_1	10	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGTTCATGTTTTCT	9896	False	NA	NA	False	NA	NA	NA	8647915	8661355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8648550_8649184_8649266_8660831
ES.13064.21	chr16	+	2826	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	1208	38	-1208	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGGAGCTTTACTTT	9982	False	NA	NA	False	AATGAA	-24	NA	8648001	8675578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.22	chr16	+	1244	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	38	22717	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.7669984589461	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGGTTCTCTGGCCCC	9982	False	NA	NA	False	TTTAAA	-43	NA	8648001	8699503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8661108_8697608_8697754_8699309
ES.13064.23	chr16	+	4240	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	-206	38	206	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGAGGTATGTATTAGT	9982	False	NA	NA	False	AGTAAA	-31	NA	8648001	8676992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.25	chr16	+	6166	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	38	-2132	38	2132	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9982	False	NA	NA	False	AAAAAG	-17	NA	8648001	8678918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.27	chr16	+	1482	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	41	2549	41	-2549	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAATGCTTTCTTATTT	9985	False	NA	8	True	NA	NA	NA	8648004	8674237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.28	chr16	+	9349	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	48	7225	48	-7225	5prime_fragment	FALSE	canonical	3	177	junction_1	10	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATTGGGGTGGGGAGT	9992	False	NA	10	True	AATAAA	-18	NA	8648011	8669561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8648550_8649184_8649266_8660831
ES.13064.29	chr16	+	4280	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	432	2996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	93.7669984589461	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATACCCAGAGTACTT	NA	False	NA	NA	False	ATTAAA	-43	NA	8648395	8664991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8662482_8662520_8663126_8663201
ES.13064.3	chr16	+	4768	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	-48	2997	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	93.7669984589461	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACCCAGAGTACTTT	9896	False	NA	NA	False	ATTAAA	-44	NA	8647915	8664992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8662482_8662520_8663132_8663200
ES.13064.30	chr16	+	1382	1	NIC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	11815	386	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTGGTTTATGATTGA	NA	False	NA	NA	False	NA	NA	NA	8660999	8662381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8661000_8662400
ES.13064.31	chr16	+	7355	3	NNC	ENSMUSG00000022507.7	novel	1245	2	NA	NA	12776	-7359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTCTTTGATAAATGG	NA	False	NA	15	True	NA	NA	NA	8661960	8669427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8662482_8662520_8663128_8663200
ES.13064.32	chr16	+	1967	2	Intergenic	novelGene_10899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACCCAGAGTACTTT	NA	False	NA	NA	False	ATTAAA	-44	NA	8662947	8664992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8663089_8663166
ES.13064.34	chr16	+	6975	1	Intergenic	novelGene_10900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTTTTTTTCTTTTTTT	NA	False	NA	6	True	AATAAA	-17	NA	8663495	8670470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8663500_8670500
ES.13064.35	chr16	+	5276	1	NIC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	21604	-722	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGTTACTTTTTTCC	NA	False	NA	21	True	ATTAAA	-16	NA	8670788	8676064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_8670800_8676100
ES.13064.4	chr16	+	3264	5	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	-48	-722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.9370739763817	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGTTACTTTTTTCC	9896	False	NA	21	True	ATTAAA	-16	NA	8647915	8676064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8660876_8661009_8661108_8673657
ES.13064.5	chr16	+	4107	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-31	-4	-31	4	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCTTGTCTGTAATTT	9913	False	NA	14	True	AATAAA	-25	NA	8647932	8676790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.6	chr16	+	2701	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-5	1376	-5	-1376	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAACCTTACTAAGTTA	9939	False	NA	NA	False	NA	NA	NA	8647958	8675410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ES.13064.7	chr16	+	1839	3	ISM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	-5	14788	-5	3	5prime_fragment	FALSE	canonical	3	177	junction_1	10	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCGTGTCATAGAAATGT	9939	False	NA	11	True	AATAAA	-22	NA	8647958	8661998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_8648550_8649184_8649266_8660831
ES.13064.8	chr16	+	2863	4	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	-5	1066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	88.5299698156255	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGGGTAGAGATACTA	9939	False	NA	NA	False	AATATA	-16	NA	8647958	8663061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648550_8649184_8649266_8660831_8662482_8662520
ES.13064.9	chr16	+	4332	4	NNC	ENSMUSG00000022507.7	novel	4072	4	NA	NA	-5	3002	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	88.5299698156255	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGTACTTTGGTTT	9939	False	NA	NA	False	TATAAA	-21	NA	8647958	8664997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8648010_8648515_8648550_8649184_8649266_8660831
ES.13065.1	chr16	-	2510	1	Intergenic	novelGene_10897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACACTCAAGAAGATAT	7911	False	NA	NA	False	NA	NA	NA	8652714	8650204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8650200_8652700
ES.13066.1	chr16	-	271	1	Intergenic	novelGene_10898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6080	False	NA	NA	False	NA	NA	NA	8654545	8654274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8654300_8654500
ES.13067.1	chr16	-	5409	1	Antisense	novelGene_ENSMUSG00000022507.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCGGGCAGTGGTGGCGC	9397	False	NA	NA	False	NA	NA	NA	8662777	8657368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_8657400_8662800
ES.13068.1	chr16	+	1602	8	NNC	ENSMUSG00000116469.2	novel	722	3	NA	NA	155	87876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0916158540436	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGGTGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	8898163	9043184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8898235_8953545_8953645_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9042508
ES.13068.10	chr16	+	811	3	Fusion	ENSMUSG00000116469.2_ENSMUSG00000116123.2	novel	673	3	NA	NA	-25542	36	multi-exon	FALSE	canonical	0	0	junction_2	18.5	128	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTTGTGTGCAGTCT	6192	False	NA	51	True	NA	NA	NA	8951091	8980234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_8951217_8953545_8953645_8979647
ES.13068.11	chr16	+	3433	7	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53104	88061	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	14.7044966667419	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTGAAAGTTTCAATAG	6213	False	NA	NA	False	AATAAA	-17	NA	8951112	9043369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.12	chr16	+	2571	10	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53115	151991	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	18.7853370714738	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAGCAAACAGTTCA	6224	False	NA	NA	False	NA	NA	NA	8951123	9107299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_9010517_9010673_9032429_9032546_9038336_9038565_9062273_9062421_9075343_9075424_9085689_9085853_9087840_9088026_9105994
ES.13068.13	chr16	+	3502	8	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53121	88059	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.8461995701281	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTGAAAGTTTCAAT	6230	False	NA	NA	False	AATAAA	-15	NA	8951129	9043367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767
ES.13068.14	chr16	+	4505	1	Genic_Genomic	ENSMUSG00000116469.2	novel	NA	NA	NA	NA	53156	361	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTTGGGATTCCTGT	6265	False	NA	NA	False	AATAAA	-12	NA	8951164	8955669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_8951200_8955700
ES.13068.15	chr16	+	848	1	Intergenic	novelGene_10902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGTTTACTTATATGT	NA	False	NA	NA	False	GATAAA	-17	NA	8955609	8956457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8955600_8956500
ES.13068.16	chr16	+	3760	4	Intergenic	novelGene_10903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_3	20.5426385841741	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATATATATGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	8964783	9078665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8964951_9010517_9010673_9032429_9032546_9075343
ES.13068.17	chr16	+	4927	8	Intergenic	novelGene_10904	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_5	17.1082984995885	152	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTTTGATTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	8970605	9044653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9039930_9040024_9040402_9040532_9040767
ES.13068.18	chr16	+	2739	7	Intergenic	novelGene_10905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7298801217728	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTCCTGCGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8970605	9059891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970722_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9058024
ES.13068.19	chr16	+	2878	7	Intergenic	novelGene_10906	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7298801217728	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGCGTGTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	8970605	9059894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9058024
ES.13068.2	chr16	+	4483	3	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTTGTATCCCCTTGA	NA	False	NA	NA	False	NA	NA	NA	8923417	8928292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8923444_8923703_8924834_8924965
ES.13068.20	chr16	+	5691	12	Intergenic	novelGene_10907	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_8	16.8635751040299	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGAGGTTTTAAGCT	NA	False	NA	NA	False	AGTAAA	-10	NA	8970626	9088231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767_9040896_9042508_9042686_9075343_9079070_9085689_9085853_9086874_9087054_9087840
ES.13068.21	chr16	+	787	5	Intergenic	novelGene_10908	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.73205080756888	184	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAAAAATAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	8970644	9095861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970726_9032433_9032546_9085689_9085853_9087840_9088026_9095615
ES.13068.22	chr16	+	1796	7	Intergenic	novelGene_10909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_6	14.0880169726694	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTGAAAGTTTCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	8970680	9043367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9042508
ES.13068.23	chr16	+	2256	13	Intergenic	novelGene_10913	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_8	17.8021534277926	189	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTACTGTGGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	8970681	9119164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9062273_9062421_9075343_9075424_9077335_9077520_9078913_9079070_9085710_9085853_9087840_9088026_9118738
ES.13068.24	chr16	+	2353	9	Intergenic	novelGene_10912	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_7	16.6803589589673	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTCCTGCGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8970681	9059891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9042508_9042686_9058024_9058114_9058740
ES.13068.25	chr16	+	3294	7	Intergenic	novelGene_10910	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	20.1632228464488	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAATGTATATAATTGAC	NA	False	NA	NA	False	NA	NA	NA	8970681	9043164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9039930_9040024_9040402_9040532_9040767
ES.13068.26	chr16	+	3305	7	Intergenic	novelGene_10911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_4	13.0053407832663	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGACAGTCTGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	8970681	9043176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767
ES.13068.27	chr16	+	3846	5	Intergenic	novelGene_10914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTATATATATGTCT	NA	False	NA	NA	False	NA	NA	NA	8970682	9078662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9032429_9032546_9058024_9058114_9062273_9062421_9075343
ES.13068.28	chr16	+	4499	7	Intergenic	novelGene_10917	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.9582821457049	150	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGTTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	8970687	9044380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767
ES.13068.29	chr16	+	3357	7	Intergenic	novelGene_10915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	18.7142251301576	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTGGTTTATCTTC	NA	False	NA	NA	False	NA	NA	NA	8970687	9043185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970907_9010517_9010673_9032429_9032546_9036624_9036717_9038336_9038565_9040402_9040532_9040767
ES.13068.3	chr16	+	1069	2	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTCTAAGTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	8923424	8924708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8923489_8923703
ES.13068.30	chr16	+	3496	7	Intergenic	novelGene_10916	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	16.0147501454822	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTGAAAGTTTCAATAG	NA	False	NA	NA	False	AATAAA	-17	NA	8970687	9043369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9036624_9036717_9038336_9038565_9040402_9040532_9040767
ES.13068.31	chr16	+	2859	8	Intergenic	novelGene_10918	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	15.2676796146738	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGCGTGTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	8970692	9059894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767_9040896_9058024
ES.13068.32	chr16	+	2634	6	Intergenic	novelGene_10920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	14.9398795175865	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGCGTGTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	8970694	9059894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9058024
ES.13068.33	chr16	+	3992	8	Intergenic	novelGene_10919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_5	17.1082984995885	149	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTACAGTATGGTTTGG	NA	False	NA	NA	False	AGTAAA	-14	NA	8970694	9043807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9036624_9036713_9038336_9038565_9039930_9040024_9040402_9040532_9040767
ES.13068.34	chr16	+	3389	6	Intergenic	novelGene_10921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7164589551735	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACTGAAAGTTTCAATA	NA	False	NA	NA	False	AATAAA	-16	NA	8970697	9043368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.35	chr16	+	4058	6	Intergenic	novelGene_10922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	19.2603219080056	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCACTAAATGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	8970701	9078654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9036624_9036717_9038336_9038565_9075343
ES.13068.36	chr16	+	3700	6	Intergenic	novelGene_10923	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7164589551735	149	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCTGCTTCTCTCAAAT	NA	False	NA	NA	False	NA	NA	NA	8970703	9043685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.37	chr16	+	4236	7	Intergenic	novelGene_10924	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	15.3920975395385	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATATATATGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	8970703	9078665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9075343
ES.13068.38	chr16	+	3026	9	Intergenic	novelGene_10925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_4	18.6597829569371	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTCCTGCGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8970704	9059891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9038336_9038565_9039930_9040024_9040402_9040532_9040767_9040896_9042508_9042686_9058024
ES.13068.39	chr16	+	4458	9	Intergenic	novelGene_10926	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	17.9217047180228	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAATGTGTATATATATG	NA	False	NA	NA	False	NA	NA	NA	8970707	9078659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9058024_9058114_9062273_9062421_9075343
ES.13068.4	chr16	+	4250	2	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATTTGTATCCCCTTG	NA	False	NA	NA	False	NA	NA	NA	8923438	8928291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8924597_8925199
ES.13068.40	chr16	+	1492	9	Intergenic	novelGene_10928	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.3324829710611	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGGTTTTAAGCTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	8970712	9088234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9075343_9075424_9077415_9077520_9078913_9079070_9085689_9085853_9086874_9087054_9087840
ES.13068.41	chr16	+	3192	6	Intergenic	novelGene_10927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	16.8166584076623	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGTTTATCTTCGTT	NA	False	NA	NA	False	NA	NA	NA	8970712	9043188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040408_9040532_9040767
ES.13068.43	chr16	+	2744	7	Intergenic	novelGene_10930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	15.366811279146	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTCCTGCGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	8970716	9059891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970838_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9058024
ES.13068.44	chr16	+	5420	6	Intergenic	novelGene_10929	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	7.81280999384985	155	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAAGACTGTGGGACTT	NA	False	NA	NA	False	NA	NA	NA	8970716	9045414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.46	chr16	+	3867	5	Intergenic	novelGene_10931	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	19.2532464794902	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTAAATGTGTATATAT	NA	False	NA	NA	False	NA	NA	NA	8970725	9078656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9062273_9062421_9075343
ES.13068.48	chr16	+	965	5	Intergenic	novelGene_10932	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	8.73212459828649	141	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAAATCCTATCTCCT	NA	False	NA	NA	False	NA	NA	NA	8970734	9040741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9032429_9032546_9038336_9038565_9040402
ES.13068.49	chr16	+	5851	6	Intergenic	novelGene_10934	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.7164589551735	155	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	8970737	9045870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.5	chr16	+	1916	2	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTATCCCCTTGATCT	NA	False	NA	NA	False	NA	NA	NA	8923554	8928295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_8924597_8927421
ES.13068.50	chr16	+	3195	5	Intergenic	novelGene_10933	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	15.5302124904974	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTGAAAGTTTCAATAG	NA	False	NA	NA	False	AATAAA	-17	NA	8970737	9043369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9032429_9032546_9038336_9038565_9040402_9040532_9040767
ES.13068.51	chr16	+	1577	6	Intergenic	novelGene_10936	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	16.6060230037177	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTGAAAGTTTCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	8970740	9043367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9032429_9032546_9038336_9038565_9040402_9040532_9040767_9040896_9042508
ES.13068.52	chr16	+	1209	5	Intergenic	novelGene_10935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	18.6195461813654	139	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTATAATTATCAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	8970740	9039069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970858_9010517_9010673_9032429_9032546_9036624_9036713_9038336
ES.13068.53	chr16	+	3663	9	Intergenic	novelGene_10937	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	14.1945191887573	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAGTTTCAATAGACTC	NA	False	NA	NA	False	AATAAA	-21	NA	8970740	9043373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010673_9028346_9028489_9028681_9028760_9032429_9032546_9036624_9036713_9038336_9038565_9040402_9040532_9040767
ES.13068.54	chr16	+	1930	8	Intergenic	novelGene_10938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	8.86174995386904	186	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	8970747	9099205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8970862_9010517_9010669_9032429_9032546_9085689_9085853_9087840_9087974_9095615_9095814_9097373_9097560_9098336
ES.13068.55	chr16	+	679	2	NNC	ENSMUSG00000116123.2	novel	664	2	NA	NA	-5868	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	118	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTTGTGTGCAGTCT	NA	False	NA	51	True	NA	NA	NA	8970765	8980234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8970858_8979647
ES.13068.57	chr16	+	8974	1	Intergenic	novelGene_10939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTAGATCCTACTAC	NA	False	NA	NA	False	NA	NA	NA	8991245	9000219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8991200_9000200
ES.13068.58	chr16	+	9456	4	Intergenic	novelGene_10941	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.816496580927726	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGTATGCACCCCA	NA	False	NA	NA	False	NA	NA	NA	9031387	9095895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9032546_9075343_9075424_9085689_9085853_9087840
ES.13068.59	chr16	+	4410	4	Intergenic	novelGene_10942	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	16.5797734872612	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTGAAAGTTTCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	9036733	9043367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9038565_9040402_9040532_9040767_9041575_9041724
ES.13068.6	chr16	+	1140	2	Intergenic	novelGene_10901	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTGAAATTGTCTA	1713	False	NA	NA	False	AATAAA	-20	NA	8946612	8947985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_8946666_8946898
ES.13068.60	chr16	+	4382	3	Intergenic	novelGene_10943	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	18.5	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAAAGTTTCAATAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	9036884	9043371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9038565_9040433_9040532_9040767
ES.13068.61	chr16	+	3256	4	Intergenic	novelGene_10944	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.88561808316413	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGCTTCAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	9037189	9076673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9037733_9039689_9040896_9042508_9042686_9075343
ES.13068.62	chr16	+	5652	1	Intergenic	novelGene_10945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	9040218	9045870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9040200_9045900
ES.13068.63	chr16	+	786	4	Intergenic	novelGene_10946	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAACCTCTGTAGTGA	NA	False	NA	NA	False	TATAAA	-9	NA	9042651	9075859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9042686_9058024_9058114_9062273_9062421_9075343
ES.13068.64	chr16	+	5933	1	Intergenic	novelGene_10947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTCCTGCGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	9053958	9059891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9054000_9059900
ES.13068.65	chr16	+	6658	1	Intergenic	novelGene_10948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9058356	9065014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9058400_9065000
ES.13068.66	chr16	+	2455	2	Intergenic	novelGene_10949	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTAAATGTGTATATAT	NA	False	NA	NA	False	NA	NA	NA	9076130	9078656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9076233_9076303
ES.13068.67	chr16	+	2899	1	Intergenic	novelGene_10950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	9077694	9080593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9077700_9080600
ES.13068.68	chr16	+	8701	1	Intergenic	novelGene_10951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCAGAGGGAGGATGAA	NA	False	NA	NA	False	NA	NA	NA	9090535	9099236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9090500_9099200
ES.13068.69	chr16	+	1463	1	Intergenic	novelGene_10952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAAGATGTAT	NA	False	NA	NA	False	AATAAA	-10	NA	9102354	9103817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9102400_9103800
ES.13068.7	chr16	+	1893	5	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	52968	78452	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	19.6277864263905	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTATGTGTGTGTGTCT	6077	False	NA	NA	False	NA	NA	NA	8950976	9033760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_8964882_8964951_9010517_9010673_9032429
ES.13068.70	chr16	+	866	1	Intergenic	novelGene_10953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	9102575	9103441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_9102600_9103400
ES.13068.8	chr16	+	1698	3	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53039	940	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3.5	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAGTCTTCACTTCTCCT	6148	False	NA	17	True	AATAAA	-27	NA	8951047	8956248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_8954818
ES.13068.9	chr16	+	4473	4	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53039	16096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.779617264871	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGCCTTTTGATGTTA	6148	False	NA	NA	False	AATAAA	-15	NA	8951047	8971404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_8951217_8953545_8953645_8964882_8964951_8967267
ES.13069.1	chr16	-	7683	1	Genic_Genomic	ENSMUSG00000116348.2	novel	NA	NA	NA	NA	-6865	-2150	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAATCAAGATCTCGGT	NA	False	NA	NA	False	NA	NA	NA	8932499	8924816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_8924800_8932500
ES.1307.1	chr1	-	6174	2	Antisense	novelGene_ENSMUSG00000026436.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACCACAAAAAATTAGTT	NA	False	NA	NA	False	NA	NA	NA	131943908	131937527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_131938038_131938244
ES.1307.2	chr1	-	274	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGCTCCAGTGTGTCGGG	NA	False	NA	NA	False	NA	NA	NA	131938235	131937961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_131938000_131938200
ES.13070.1	chr16	-	211	1	Intergenic	novelGene_10940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGATGAGTATGAAGTG	NA	False	NA	NA	False	NA	NA	NA	8999279	8999068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_8999100_8999300
ES.13071.1	chr16	+	1457	2	Antisense	novelGene_ENSMUSG00000059003.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAATAAGAAAATACCTA	NA	False	NA	NA	False	NA	NA	NA	9690396	9693246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_9690512_9691904
ES.13072.1	chr16	-	1927	1	Intergenic	novelGene_10954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGATGAACAAGTGAGT	4946	False	NA	NA	False	NA	NA	NA	9962549	9960622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_9960600_9962500
ES.13073.1	chr16	+	526	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	-9	288	-7	-7	multi-exon	FALSE	canonical	3	487	junction_1	5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTGCTTCTGTGTT	NA	False	NA	22	True	AATAAA	-22	NA	9988082	9992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_9988189_9988278_9988356_9992144
ES.13073.2	chr16	+	797	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	8	0	8	0	multi-exon	FALSE	canonical	3	487	junction_1	5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTGCTCTCTGGTCCT	NA	False	NA	68	True	NA	NA	NA	9988099	9992775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_9988189_9988278_9988356_9992144
ES.13073.3	chr16	+	4384	1	NIC	ENSMUSG00000039209.13	novel	550	3	NA	NA	12	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTGCTTCTGTGTT	NA	False	NA	22	True	AATAAA	-22	NA	9988103	9992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_9988100_9992500
ES.13074.1	chr16	+	3229	9	FSM	ENSMUSG00000116187.2_ENSMUSG00000039200.17	ENSMUST00000119023.8	1048	9	2	-2183	2	955	multi-exon	FALSE	canonical	3	57	junction_2	24.2474225434375	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGCTTTATATGATGA	NA	False	NA	NA	False	ATTAAA	-12	NA	10010771	10057335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029
ES.13074.10	chr16	+	2849	8	NIC	ENSMUSG00000039200.17	novel	1230	10	NA	NA	1	-370	intron_retention	FALSE	canonical	3	9	junction_7	45.7602447545902	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTTAGCCATGGAGTT	NA	False	NA	NA	False	TATAAA	-17	NA	10010811	10060545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424
ES.13074.11	chr16	+	1643	6	FSM	ENSMUSG00000039200.17	ENSMUST00000133674.2	2166	6	1	522	1	-522	multi-exon	FALSE	canonical	3	57	junction_2	27.9928562315459	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTCTGTTGCTATCAC	NA	False	NA	NA	False	ATTAAA	-26	NA	10010811	10031573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516
ES.13074.12	chr16	+	3444	10	FSM	ENSMUSG00000039200.17	ENSMUST00000117220.8	1230	10	26	-2240	1	3	multi-exon	FALSE	canonical	3	57	junction_2	25.7557377042739	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424
ES.13074.13	chr16	+	1168	9	FSM	ENSMUSG00000039200.17	ENSMUST00000119023.8	1048	9	42	-162	1	162	multi-exon	FALSE	canonical	3	57	junction_2	24.2474225434375	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGCTTCTTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	10010811	10055314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029
ES.13074.14	chr16	+	3134	7	NNC	ENSMUSG00000039200.17	novel	1048	9	NA	NA	1	1895	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	44.8803966114383	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAATTATGTCTGATTT	NA	False	NA	NA	False	NA	NA	NA	10010811	10033990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031603
ES.13074.15	chr16	+	2042	9	NIC	ENSMUSG00000039200.17	novel	1230	10	NA	NA	1	1112	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	46.8054484008005	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGAATGTTTTGTCTT	NA	False	NA	NA	False	TTTAAA	-15	NA	10010811	10070454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
ES.13074.16	chr16	+	1023	8	NIC	ENSMUSG00000039200.17	novel	1230	10	NA	NA	1	21	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	51.7876354323449	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAACACAGTTTTTTC	NA	False	NA	NA	False	AATAAA	-38	NA	10010811	10058699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424
ES.13074.17	chr16	+	1947	9	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	-373	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	43.4753881523788	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTATTTTAGCCATGGA	NA	False	NA	NA	False	TATAAA	-14	NA	10010811	10060542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424_10058511_10059409
ES.13074.18	chr16	+	3224	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACTGTCTTTTATGA	NA	False	NA	10	True	AATAAA	-18	NA	10010811	10060918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
ES.13074.19	chr16	+	1651	7	NNC	ENSMUSG00000039200.17	novel	2166	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	46.1136880136714	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTAAAAGGTACT	NA	False	NA	NA	False	NA	NA	NA	10010831	10032095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031171
ES.13074.2	chr16	+	2203	6	FSM	ENSMUSG00000039200.17	ENSMUST00000133674.2	2166	6	-37	0	4	0	multi-exon	FALSE	canonical	3	57	junction_2	27.9928562315459	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTAAAAGGTACT	NA	False	NA	NA	False	NA	NA	NA	10010773	10032095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516
ES.13074.20	chr16	+	2442	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	36	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	38.5931612953051	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTGTCTTTTATG	NA	False	NA	9	True	AATAAA	-17	NA	10010846	10060917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424_10058511_10059409
ES.13074.21	chr16	+	1270	10	NNC	ENSMUSG00000039200.17	novel	465	6	NA	NA	257	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0138445903425	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTTCAGAAGCTACAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	10011067	10058676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10011214_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424
ES.13074.22	chr16	+	3219	11	NNC	ENSMUSG00000039200.17	novel	465	6	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.7947365107139	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10011137	10060915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10011214_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
ES.13074.23	chr16	+	486	1	ISM	ENSMUSG00000039200.17	ENSMUST00000133674.2	2166	6	20565	234	706	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTTCGTGTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	10031375	10031861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10031400_10031900
ES.13074.24	chr16	+	3389	4	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	21131	1005	intron_retention	FALSE	canonical	2	8	junction_3	30.7064958744707	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTTGCACCTTATCT	NA	False	NA	NA	False	ATTAAA	-14	NA	10051800	10059683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10054084_10055029_10055097_10058424_10058511_10058730
ES.13074.25	chr16	+	6265	1	Genic_Genomic	ENSMUSG00000039200.17	novel	NA	NA	NA	NA	26710	2729	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATGATTCATAACAGT	NA	False	NA	NA	False	NA	NA	NA	10057379	10063644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_10057400_10063600
ES.13074.3	chr16	+	2192	11	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	967	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	41.4305442880009	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCATTTTTCAAACTAG	NA	False	NA	15	True	ATTAAA	-20	NA	10010790	10070309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10065308_10065462_10069241
ES.13074.4	chr16	+	2557	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	223	-2	9	2	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTGTCTTTTATG	NA	False	NA	9	True	AATAAA	-17	NA	10010798	10060917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ES.13074.5	chr16	+	1147	7	NNC	ENSMUSG00000039200.17	novel	1048	9	NA	NA	1	-524	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	46.1136880136714	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGAGTCTGTTGCTATC	NA	False	NA	NA	False	ATTAAA	-24	NA	10010811	10031571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031171
ES.13074.6	chr16	+	2468	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	39.595173667731	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010811	10060915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ES.13074.7	chr16	+	2389	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	33.4265363645911	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTACTGTCTTTTATG	NA	False	NA	9	True	AATAAA	-17	NA	10010811	10060917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10010890_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ES.13074.8	chr16	+	2092	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	236	450	1	-450	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGGTTTTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	10010811	10060465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ES.13074.9	chr16	+	1004	7	NNC	ENSMUSG00000039200.17	novel	1048	9	NA	NA	1	-235	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	44.8803966114383	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTTTCGTGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	10010811	10031860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10031603
ES.13075.1	chr16	-	4811	2	Antisense	novelGene_ENSMUSG00000116187.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACACAACAATAACAACAA	NA	False	NA	NA	False	NA	NA	NA	10057642	10051065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_10052253_10054018
ES.13076.1	chr16	+	182	1	Intergenic	novelGene_10955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACAAAACAACTAC	NA	False	NA	NA	False	NA	NA	NA	10123153	10123335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10123200_10123300
ES.13077.1	chr16	-	3469	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	-22	-7	-22	7	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTGTTTGTTTGTGGT	NA	False	NA	2	True	ATTAAA	-38	NA	10131854	10099605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ES.13077.10	chr16	-	1756	4	NNC	ENSMUSG00000116270.2	novel	4490	3	NA	NA	-5359	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.88561808316413	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACACACACACATATAT	NA	False	NA	NA	False	NA	NA	NA	10154508	10141635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10142522_10144507_10144749_10146083_10146285_10154080
ES.13077.11	chr16	-	4868	2	NNC	ENSMUSG00000116270.2	novel	315	2	NA	NA	2640	333	intron_retention	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACACACACACATATAT	NA	False	NA	NA	False	NA	NA	NA	10162815	10141635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10146285_10162596
ES.13077.12	chr16	-	1623	5	NNC	ENSMUSG00000116270.2	novel	4490	3	NA	NA	2739	310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.29903810567666	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATATTATATA	NA	False	NA	NA	False	NA	NA	NA	10162716	10141658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10142522_10144507_10144749_10145742_10145941_10146083_10146285_10162596
ES.13077.13	chr16	-	4590	2	NNC	ENSMUSG00000116270.2	novel	315	2	NA	NA	-5206	-1	intron_retention	FALSE	canonical	2	4	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTGTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	10154355	10141969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10146285_10154080
ES.13077.14	chr16	-	4377	3	NNC	ENSMUSG00000116270.2	novel	4490	3	NA	NA	2654	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTGTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	10162801	10141969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10145941_10146083_10146285_10162596
ES.13077.2	chr16	-	3359	5	NNC	ENSMUSG00000022505.10	novel	3440	5	NA	NA	-39	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.7180877121831	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGATAATTGTATGGT	NA	False	NA	-11	True	ATTAAA	-25	NA	10131774	10099618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10102480_10103318_10103449_10105918_10106025_10110125_10110289_10131675
ES.13077.3	chr16	-	3254	3	Fusion	ENSMUSG00000022505.10_ENSMUSG00000116270.2	novel	315	2	NA	NA	-5403	-10	multi-exon	FALSE	canonical	0	0	junction_1	2	160	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	False	NA	-15	True	ATTAAA	-21	NA	10154552	10099622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_10102204_10146083_10146285_10154080
ES.13077.4	chr16	-	3199	6	NNC	ENSMUSG00000022505.10	novel	3440	5	NA	NA	-42	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6164810290813	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	False	NA	-15	True	ATTAAA	-21	NA	10131777	10099622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10100691_10100866_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ES.13077.6	chr16	-	2847	3	NNC	ENSMUSG00000022505.10	novel	3440	5	NA	NA	-43	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	False	NA	-15	True	ATTAAA	-21	NA	10131778	10099622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10102204_10110125_10110289_10131675
ES.13077.7	chr16	-	3290	6	NNC	ENSMUSG00000022505.10	novel	3440	5	NA	NA	24	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.6164810290813	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	False	NA	-15	True	ATTAAA	-21	NA	10131808	10099622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10100398_10100513_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ES.13077.8	chr16	-	1311	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	29	2100	29	-2100	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTTTGTCTGTAAGA	NA	False	NA	NA	False	ATTAAA	-33	NA	10131803	10101712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ES.13077.9	chr16	-	4695	3	NNC	ENSMUSG00000116270.2	novel	4490	3	NA	NA	2671	334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACACACACACATATATA	NA	False	NA	NA	False	NA	NA	NA	10162784	10141634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10145941_10146083_10146285_10162596
ES.13078.1	chr16	-	1438	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	357	8	315	-8	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTCTGTCTTTAGGAA	NA	False	NA	-4	True	AATAAA	-14	NA	10212997	10175819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
ES.13079.1	chr16	+	1375	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-88	834	-88	248	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGTTTCTGCCTCATG	NA	False	NA	80	True	NA	NA	NA	10229723	10241458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.10	chr16	+	3974	8	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-8	881	intron_retention	FALSE	canonical	3	699	junction_1	74.668519170411	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10229803	10243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10239544_10240685_10240770_10241104
ES.13079.11	chr16	+	2457	10	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-8	7	-8	-7	intron_retention	FALSE	canonical	3	699	junction_1	80.0291613517639	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACAAGGCTTTGTCA	NA	False	NA	NA	False	AAGAAA	-18	NA	10229803	10242285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685
ES.13079.13	chr16	+	1305	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-8	184	intron_retention	FALSE	canonical	3	711	junction_2	67.1451348632384	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTAGGGCCTGCTTCC	NA	False	NA	16	True	AATAAA	-18	NA	10229803	10241394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.15	chr16	+	672	6	FSM	ENSMUSG00000022503.11	ENSMUST00000129280.8	679	6	-12	19	-6	-19	multi-exon	FALSE	canonical	3	699	junction_1	72.6151499344317	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACTATGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	10229805	10238396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119
ES.13079.16	chr16	+	2906	11	NNC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-6	881	intron_retention	FALSE	canonical	2	13	junction_3	255.963591160931	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10229805	10243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10229860_10229933_10230039_10231474_10231507_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.17	chr16	+	1851	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-6	179	intron_retention	FALSE	canonical	3	699	junction_1	79.9631087779365	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTATCCCTTAGGGCCTG	NA	False	NA	11	True	AATAAA	-13	NA	10229805	10241389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.19	chr16	+	3232	8	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-1	184	intron_retention	FALSE	canonical	3	699	junction_1	80.3347587871387	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTAGGGCCTGCTTCC	NA	False	NA	16	True	AATAAA	-18	NA	10229810	10241394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10240770_10241104
ES.13079.20	chr16	+	4345	8	NIC	ENSMUSG00000022503.11	novel	3296	9	NA	NA	-1	185	intron_retention	FALSE	canonical	3	699	junction_1	90.2036245255756	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTAGGGCCTGCTTCCT	NA	False	NA	17	True	AATAAA	-19	NA	10229810	10241395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.21	chr16	+	3482	9	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	4	-10	intron_retention	FALSE	canonical	3	699	junction_1	75.6918093323181	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACAAGGCTTTG	NA	False	NA	NA	False	AAGAAA	-15	NA	10229821	10242282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10240770_10241104
ES.13079.23	chr16	+	2773	10	NNC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-8	-10	intron_retention	FALSE	canonical	0	0	junction_2	267.566860226296	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACAAGGCTTTG	NA	False	NA	NA	False	AAGAAA	-15	NA	10229825	10242282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10229860_10229933_10230088_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.24	chr16	+	4202	9	FSM	ENSMUSG00000022503.11	ENSMUST00000142771.8	3296	9	-5	-901	-5	901	multi-exon	FALSE	canonical	3	699	junction_1	84.8099898302081	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGCTCTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	10229828	10243193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.26	chr16	+	1244	11	NNC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	6	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.485106780101	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTAGGGCCTGCTTCC	NA	False	NA	16	True	AATAAA	-18	NA	10229839	10241394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10229860_10229933_10230088_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.27	chr16	+	2873	10	NNC	ENSMUSG00000022503.11	novel	510	5	NA	NA	136	881	intron_retention	FALSE	canonical	0	0	junction_1	270.034337094149	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10230063	10243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10230088_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.28	chr16	+	1310	11	NNC	ENSMUSG00000022503.11	novel	510	5	NA	NA	267	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	339.159490505573	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTAGGGCCTGCTTCC	NA	False	NA	16	True	AATAAA	-18	NA	10230194	10241394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10230357_10230995_10231074_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.29	chr16	+	1941	10	NNC	ENSMUSG00000022503.11	novel	510	5	NA	NA	268	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	270.034337094149	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTATCCCTTAGGGCC	NA	False	NA	9	True	AATAAA	-11	NA	10230195	10241387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10231074_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.3	chr16	+	2210	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-66	-23	-66	23	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTGTGGTGTGTGTGTT	NA	False	NA	NA	False	AAAACA	-28	NA	10229745	10242315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.30	chr16	+	883	6	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	8307	850	-981	232	3prime_fragment	FALSE	canonical	3	753	junction_3	63.741979887669	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACAGGACTCCCAGGAA	NA	False	NA	64	True	NA	NA	NA	10238118	10241442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.4	chr16	+	3069	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	-47	-901	-47	901	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGCTCTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	10229764	10243193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.5	chr16	+	1135	11	NNC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-23	175	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	255.963591160931	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAACCTATCCCTTAGGG	NA	False	NA	7	True	AATAAA	-9	NA	10229788	10241385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10229860_10229933_10230039_10231474_10231507_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.6	chr16	+	2859	9	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	699	junction_1	72.8336074556245	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTGTCATTCTTTC	NA	False	NA	NA	False	AAGAAA	-25	NA	10229798	10242292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10239202_10239440_10239544_10240685_10240770_10241104
ES.13079.9	chr16	+	2760	10	NIC	ENSMUSG00000022503.11	novel	2121	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	699	junction_1	79.9631087779365	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTGTCATTCTTTC	NA	False	NA	NA	False	AAGAAA	-25	NA	10229799	10242292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ES.1308.1	chr1	-	2097	1	Antisense	novelGene_ENSMUSG00000026436.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131946161	131944064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_131944100_131946200
ES.13080.1	chr16	-	3149	1	Genic_Genomic	ENSMUSG00000050908.13	novel	NA	NA	NA	NA	8149	2669	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAACCAAACAAACCC	NA	False	NA	NA	False	CATAAA	-38	NA	10238900	10235751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_10235800_10238900
ES.13080.2	chr16	-	3091	8	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_7	3.92792202424786	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTCTCATAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	10265217	10238420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793_10264874_10265088
ES.13080.3	chr16	-	3178	6	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	2	junction_5	3.84707681233427	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTATTTCTCATAG	NA	False	NA	NA	False	AATAAA	-13	NA	10265238	10238424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793
ES.13080.4	chr16	-	2939	7	NIC	ENSMUSG00000050908.13	novel	3315	7	NA	NA	12	-4	intron_retention	FALSE	canonical	0	0	junction_6	4.60675832036175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTATTTCTCATAG	NA	False	NA	NA	False	AATAAA	-13	NA	10265214	10238424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10264793_10264874_10265088
ES.13080.5	chr16	-	3305	7	FSM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	6	4	6	-4	multi-exon	FALSE	canonical	2	5	junction_6	2.91070819942883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTATTTCTCATAG	NA	False	NA	NA	False	AATAAA	-13	NA	10265220	10238424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
ES.13080.6	chr16	-	1421	7	FSM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	6	1888	6	799	multi-exon	FALSE	canonical	2	5	junction_6	2.91070819942883	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTGGCACTCACCCTG	NA	False	NA	NA	False	AATATA	-21	NA	10265220	10240308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
ES.13080.7	chr16	-	1063	1	Intergenic	novelGene_10956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAATTCTGTGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	10254810	10253747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10253700_10254800
ES.13081.1	chr16	+	238	1	Intergenic	novelGene_10957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATCTAGTTGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10265281	10265519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10265300_10265500
ES.13082.1	chr16	+	2560	3	Intergenic	novelGene_10958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAACCTCTAAGTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	10286351	10292031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10286474_10289437_10289520_10289675
ES.13082.2	chr16	+	3777	3	Intergenic	novelGene_10959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTGAGTCTTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	10286362	10293259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10286474_10289437_10289520_10289675
ES.13082.3	chr16	+	5401	3	Intergenic	novelGene_10960	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTCTAAGTATGCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	10286375	10292034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10287528_10287629_10289520_10289675
ES.13083.1	chr16	+	6290	19	NNC	ENSMUSG00000022504.11	novel	4237	19	NA	NA	-71	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.3833221775543	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGTTCTCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	10297851	10346282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10298291_10319630_10319778_10319999_10320096_10321529_10321593_10321733_10321812_10324059_10324105_10324553_10324689_10326429_10326595_10327220_10327287_10328567_10330219_10330992_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341783_10341861_10343030_10343128_10343627
ES.13083.2	chr16	+	8908	19	NNC	ENSMUSG00000022504.11	novel	4237	19	NA	NA	-37	2645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.37997137204158	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCTTTGGTGTTTTGTC	NA	False	NA	NA	False	TTTAAA	-39	NA	10297885	10348927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10298291_10319630_10319778_10319999_10320096_10321529_10321593_10321733_10321812_10324059_10324105_10324553_10324689_10326429_10326595_10327220_10327287_10328567_10330219_10330992_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
ES.13083.3	chr16	+	3913	19	FSM	ENSMUSG00000022504.11	ENSMUST00000230146.2	3953	19	-94	134	-59	-134	multi-exon	FALSE	canonical	0	0	junction_1	1.37997137204158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGGGCCTGGCCCAGACC	NA	False	NA	NA	False	CATAAA	-17	NA	10307550	10344156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10307729_10319630_10319778_10319999_10320096_10321529_10321593_10321730_10321812_10324059_10324105_10324553_10324689_10326429_10326595_10327220_10327287_10328567_10330219_10330992_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
ES.13083.4	chr16	+	6020	19	NNC	ENSMUSG00000022504.11	novel	3953	19	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.37997137204158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGTTCTCAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	10307570	10346282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10307729_10319630_10319778_10319999_10320096_10321529_10321593_10321730_10321812_10324059_10324105_10324553_10324693_10326434_10326595_10327220_10327287_10328567_10330221_10330992_10331152_10332300_10332373_10335551_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
ES.13083.6	chr16	+	1314	7	ISM	ENSMUSG00000022504.11	ENSMUST00000230146.2	3953	19	27778	4	27776	-4	3prime_fragment	FALSE	canonical	0	0	junction_5	1.60727512683216	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCTCTGGGGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	10335422	10344286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10335633_10336157_10336251_10338831_10338919_10341582_10341667_10341776_10341861_10343030_10343128_10343627
ES.13084.1	chr16	-	1431	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	-44	2	-44	-2	multi-exon	FALSE	canonical	3	61	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTTGCCTTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	10360962	10348072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10348677_10360135
ES.13084.2	chr16	-	1287	2	NNC	ENSMUSG00000038055.13	novel	1389	2	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTTGCCTTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	10360948	10348072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10348677_10360265
ES.13084.3	chr16	-	6957	2	NNC	ENSMUSG00000038055.13	novel	1389	2	NA	NA	-38	-2	intron_retention	FALSE	canonical	2	3	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTTGCCTTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	10360956	10348072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10354209_10360135
ES.13084.4	chr16	-	1547	3	NNC	ENSMUSG00000038055.13	novel	1389	2	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTCCTTTGCCTTGTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	10360948	10348073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10348677_10354077_10354209_10360135
ES.13084.5	chr16	-	4242	2	FSM	ENSMUSG00000038055.13	ENSMUST00000183355.8	816	2	-3432	6	-3432	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAATTTCCTTTGCCTTG	NA	False	NA	-6	True	ATTAAA	-14	NA	10353105	10348076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10348677_10349463
ES.13084.6	chr16	-	6375	1	NIC	ENSMUSG00000038055.13	novel	1389	2	NA	NA	-4778	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAATTTCCTTTGCCTTG	NA	False	NA	-6	True	ATTAAA	-14	NA	10354451	10348076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10348100_10354500
ES.13085.1	chr16	+	3708	22	NIC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	5	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	15.3041722113556	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCGGAGTCTCATTA	NA	False	NA	NA	False	AAAAAG	-17	NA	10363232	10560328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10363507_10377884_10378014_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.10	chr16	+	6263	24	NNC	ENSMUSG00000068663.15	novel	6244	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.3162147613827	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTGGCCTGCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	10363273	10562742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395722_10395806_10397851_10397919_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.11	chr16	+	3752	23	NIC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	2	-49	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	19.400998951873	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCTATTTTGGAGG	NA	False	NA	NA	False	AATGAA	-13	NA	10363274	10560280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.12	chr16	+	5903	23	NNC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	2	-211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	19.8577586477527	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGGCAGAAGGTTAAA	NA	False	NA	1	True	AATAAA	-17	NA	10363274	10562524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509342_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.13	chr16	+	3978	23	NNC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	2	94	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.2853868403386	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTCCTGAGTGATT	NA	False	NA	NA	False	NA	NA	NA	10363274	10560423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363590_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.14	chr16	+	5949	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	47	217	2	-210	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGGCAGAAGGTTAAAT	NA	False	NA	2	True	AATAAA	-18	NA	10363274	10562525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.15	chr16	+	6283	24	NIC	ENSMUSG00000068663.15	novel	6189	24	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	19.7105711803867	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCAGGAGTGTGGCC	NA	False	NA	1	True	AATAAA	-11	NA	10363274	10562735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10556255_10556380_10559477
ES.13085.16	chr16	+	3654	23	NNC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	10	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	19.5695939729076	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCTATTTTGGAGG	NA	False	NA	NA	False	AATGAA	-13	NA	10363282	10560280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462666_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.18	chr16	+	3616	21	NNC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	28	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.2445054273993	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTGATGAGTTCTATG	NA	False	NA	NA	False	NA	NA	NA	10363300	10513596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462666_10462746_10506343_10506496_10509249_10509455_10512483
ES.13085.19	chr16	+	7681	1	NIC	ENSMUSG00000068663.15	novel	6244	24	NA	NA	4276	526	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAACTTTGTATC	4768	False	NA	NA	False	NA	NA	NA	10452199	10459880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10452200_10459900
ES.13085.2	chr16	+	4098	10	NNC	ENSMUSG00000068663.15	novel	3730	21	NA	NA	-1	28040	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	24.454038521275	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGTACTTGCTTTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	10363239	10409349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10406503
ES.13085.20	chr16	+	4245	1	Intergenic	novelGene_10961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10468227	10472472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10468200_10472500
ES.13085.21	chr16	+	3655	5	NNC	ENSMUSG00000068663.15	novel	2643	15	NA	NA	61326	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5.76085931090146	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGCAAAACCAATG	NA	False	NA	-15	True	NA	NA	NA	10509249	10562719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10509455_10512483_10512655_10549524_10549684_10559477_10560822_10560943
ES.13085.3	chr16	+	3719	21	ISM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	13	49145	0	5	5prime_fragment	FALSE	canonical	3	10	junction_9	19.7111009332305	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGATGAGTTCTATGC	NA	False	NA	NA	False	NA	NA	NA	10363240	10513597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483
ES.13085.4	chr16	+	3761	21	FSM	ENSMUSG00000068663.15	ENSMUST00000038145.13	3730	21	-31	0	1	0	multi-exon	FALSE	canonical	2	5	junction_10	20.0601595208014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCATGTGATGAGTTC	NA	False	NA	NA	False	NA	NA	NA	10363241	10513592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483
ES.13085.5	chr16	+	812	3	FSM	ENSMUSG00000068663.15	ENSMUST00000130148.2	704	3	1	-109	1	109	multi-exon	FALSE	canonical	3	59	junction_1	9	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATGGGTGTTTTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	10363241	10381418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10363507_10377884_10378014_10381000
ES.13085.6	chr16	+	6199	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	14	0	1	0	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTGGCCTGCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	10363241	10562742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.7	chr16	+	3725	22	NIC	ENSMUSG00000068663.15	novel	6213	23	NA	NA	1	73	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.0337488818384	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGTGGCTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	10363241	10560402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_10363507_10377884_10378014_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13085.8	chr16	+	3835	21	ISM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	15	49027	2	123	5prime_fragment	FALSE	canonical	3	10	junction_9	19.7111009332305	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAAATAATGACTG	NA	False	NA	NA	False	NA	NA	NA	10363242	10513715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483
ES.13085.9	chr16	+	3858	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	36	2319	2	94	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTCCTGAGTGATT	NA	False	NA	NA	False	NA	NA	NA	10363263	10560423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ES.13086.1	chr16	-	3049	1	Intergenic	novelGene_10962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGGAAAACAGAG	6015	False	NA	NA	False	NA	NA	NA	10537047	10533998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10534000_10537000
ES.13087.1	chr16	-	1903	1	Intergenic	novelGene_10963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAGCCCTGTGACCTC	278	False	NA	NA	False	AGTAAA	-14	NA	10542784	10540881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10540900_10542800
ES.13088.1	chr16	-	204	1	Intergenic	novelGene_10964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGACAAAGTTTGGAAC	NA	False	NA	NA	False	NA	NA	NA	10547715	10547511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10547500_10547700
ES.13089.1	chr16	-	1370	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	347	-1577	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603053	10601683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10601700_10603100
ES.13089.2	chr16	-	1204	2	FSM	ENSMUSG00000038037.6	ENSMUST00000038099.6	2785	2	2	1579	2	-1579	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAACAAAGATTCC	NA	False	NA	NA	False	AATAAA	-22	NA	10603398	10601685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10602786_10603294
ES.1309.1	chr1	-	2845	7	NNC	ENSMUSG00000059149.18	novel	1285	9	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.74873708374511	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTGTGTTATCCATCT	NA	False	NA	0	True	AATAAA	-14	NA	131981548	131964521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117_131980292_131981286_131981403_131981523
ES.1309.4	chr1	-	3004	7	NNC	ENSMUSG00000059149.18	novel	1285	9	NA	NA	-973	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.85287379477061	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGTGTGTTATCCATC	NA	False	NA	-1	True	AATAAA	-13	NA	131982888	131964522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117_131980292_131981796_131981963_131982753
ES.1309.5	chr1	-	3767	10	FSM	ENSMUSG00000059149.18	ENSMUST00000159038.8	1957	10	-82	-1728	-28	-1	multi-exon	FALSE	canonical	0	0	junction_6	2.87174399629335	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGTGTGTTATCCATC	NA	False	NA	-1	True	AATAAA	-13	NA	131995731	131964522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_131966712_131968277_131968399_131969595_131969667_131974043_131974192_131980117_131980292_131981286_131981403_131981796_131981963_131985453_131985706_131986897_131987097_131995400
ES.13090.1	chr16	+	3729	2	NNC	ENSMUSG00000116038.2	novel	495	3	NA	NA	-1543	-12494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	10614263	10618096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10614406_10614509
ES.13091.1	chr16	+	888	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	-9	2863	-9	-2863	multi-exon	TRUE	canonical	3	158	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCATAGTGGCCTGCCT	NA	False	NA	12	True	ATTAAA	-20	NA	10652913	10658239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10653255_10657692
ES.13091.2	chr16	+	1666	3	NNC	ENSMUSG00000037991.10	novel	3742	2	NA	NA	-6	-959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTAATGAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	10652916	10660143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10653255_10657692_10658711_10659833
ES.13091.3	chr16	+	2780	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	3	959	3	-959	multi-exon	FALSE	canonical	3	158	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTAATGAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	10652925	10660143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10653255_10657692
ES.13091.4	chr16	+	595	2	NNC	ENSMUSG00000037991.10	novel	3742	2	NA	NA	-2	-2917	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGAATTTCAGTTTGT	NA	False	NA	7	True	NA	NA	NA	10652929	10658185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10653032_10657692
ES.13091.5	chr16	+	1718	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	9	2015	0	-2015	multi-exon	FALSE	canonical	3	158	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATGAACAGAAAGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	10652931	10659087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10653255_10657692
ES.13091.6	chr16	+	1757	3	NNC	ENSMUSG00000037991.10	novel	3742	2	NA	NA	0	-959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTAATGAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	10652931	10660143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10653255_10657692_10658874_10659890
ES.13091.7	chr16	+	2907	3	NNC	ENSMUSG00000037991.10	novel	3742	2	NA	NA	1	-15469	intron_retention	FALSE	canonical	0	0	junction_1	0	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAACGCATCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	10652932	10695361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10653255_10692205_10692367_10692937
ES.13091.8	chr16	+	2251	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	10	1481	1	-1481	multi-exon	FALSE	canonical	3	158	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGGTAGCTCACAGCT	NA	False	NA	NA	False	AATAAA	-14	NA	10652932	10659621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10653255_10657692
ES.13091.9	chr16	+	3746	1	Intergenic	novelGene_10965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCAGTGCAACTGCAC	NA	False	NA	NA	False	AATAAA	-16	NA	10664313	10668059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10664300_10668100
ES.13092.1	chr16	-	7142	1	NIC	ENSMUSG00000117309.2	novel	7292	46	NA	NA	5871	-63597	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGGCTATCTATGGC	NA	False	NA	NA	False	NA	NA	NA	10750357	10743215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10743200_10750400
ES.13093.1	chr16	+	4333	1	Intergenic	novelGene_10966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATTTATTTTAATGTA	NA	False	NA	NA	False	NA	NA	NA	10784842	10789175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10784800_10789200
ES.13094.1	chr16	-	2251	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-18	2	-18	-2	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCCCCATTCATT	NA	False	NA	-13	True	AATAAA	-11	NA	10811003	10777140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ES.13094.2	chr16	-	2402	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGAAGCTGTCCCCAT	NA	False	NA	-18	True	AATAAA	-6	NA	10810975	10777145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
ES.13094.3	chr16	-	2071	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-53	217	-53	-217	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCCTTGTGTTGTGT	NA	False	NA	16	True	AATAAA	-43	NA	10811038	10777355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ES.13094.4	chr16	-	1562	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	-18	-218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.646182258409	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGCCTTGTGTTGTG	NA	False	NA	15	True	AATAAA	-42	NA	10810953	10777356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10777622_10778044_10778916_10781120_10781278_10784288_10784514_10810909
ES.13094.6	chr16	-	2160	5	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	18	-241	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	169.812396485062	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCCAGTTCACCTTTT	NA	False	NA	-8	True	AATAAA	-19	NA	10810967	10777379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10778916_10781120_10781278_10784288_10784514_10793290_10793475_10810909
ES.13094.7	chr16	-	1192	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	-49	1092	-49	457	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCCTGTGAAGGGTCT	NA	False	NA	-2	True	AATAAA	-27	NA	10811034	10778230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ES.13094.8	chr16	-	937	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	42	1256	-8	293	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTCTCTGGCACTCAGA	NA	False	NA	-2	True	NA	NA	NA	10810943	10778394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ES.13094.9	chr16	-	406	3	NNC	ENSMUSG00000022500.16	novel	2235	4	NA	NA	21	-7276	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	2	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGTCAAGGAATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	10810964	10791470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10791638_10793290_10793475_10810909
ES.13095.1	chr16	-	153	1	Intergenic	novelGene_10967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAAAATAGATCTTT	NA	False	NA	NA	False	NA	NA	NA	10838833	10838680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10838700_10838800
ES.13096.1	chr16	-	195	1	Intergenic	novelGene_10968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGGTATTGTATAATAA	NA	False	NA	NA	False	NA	NA	NA	10839107	10838912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10838900_10839100
ES.13097.1	chr16	-	1998	2	Antisense	novelGene_ENSMUSG00000115992.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTGATAATTTATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	10854005	10848037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_10849664_10853633
ES.13098.1	chr16	-	3054	3	NNC	ENSMUSG00000022500.16	novel	456	3	NA	NA	17	6551	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTGTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	10884004	10871404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10874204_10875444_10875557_10883861
ES.13099.1	chr16	+	2025	3	NNC	ENSMUSG00000037972.8	novel	2872	2	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAATGTACAGTCTTCAC	NA	False	NA	11	True	AATAAA	-27	NA	10884171	10892843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_10884339_10890095_10891787_10892676
ES.13099.2	chr16	+	2881	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	-7	-2	-7	2	multi-exon	FALSE	canonical	3	17	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCTTCACCTCTGGCT	NA	False	NA	19	True	AATAAA	-35	NA	10884186	10892851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_10884312_10890095
ES.131.1	chr1	-	3900	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-51	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_17	11.4532297011906	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14374903	14239176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.10	chr1	-	3820	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	16.8845048843699	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14374903	14239177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344368_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.11	chr1	-	4004	17	NIC	ENSMUSG00000025932.15	novel	4366	18	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	15.7023087474422	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14380221	14239177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344435_14344757_14344828_14353344_14353423_14374648_14374699_14379869
ES.131.13	chr1	-	4237	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	10.2268389688172	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14380311	14239177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.131.14	chr1	-	3786	17	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	16.7089048115069	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14374895	14239177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.15	chr1	-	4179	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	15.2295015106528	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14380335	14239177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344368_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.131.16	chr1	-	5489	9	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-24139	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	17.8110745043639	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	14325855	14239178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14322651_14322839_14323243
ES.131.18	chr1	-	3771	16	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	16.313593513795	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCCTTGGATGTCAGT	NA	False	NA	-12	True	AATAAA	-20	NA	14380088	14239178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.131.20	chr1	-	3485	13	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-40	-2	intron_retention	FALSE	canonical	1	1	junction_10	20.4876317703037	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTCCTTGGATGTCAG	NA	False	NA	-13	True	AATAAA	-19	NA	14374892	14239179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14344757_14344828_14353344_14353423_14374648
ES.131.22	chr1	-	3882	17	FSM	ENSMUSG00000025932.15	ENSMUST00000080664.14	3426	17	253	-709	-30	1	multi-exon	FALSE	canonical	2	7	junction_15	12.9897796363141	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTCCTTGGATGTCA	NA	False	NA	-14	True	AATAAA	-18	NA	14380090	14239180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14379869
ES.131.23	chr1	-	3788	17	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	97	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	16.0193974215636	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATGCTCCTTGGATGT	NA	False	NA	-16	True	AATAAA	-16	NA	14379963	14239182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14372993_14373122_14374648_14374699_14379869
ES.131.24	chr1	-	7468	17	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	15	junction_16	13.2405626768654	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTATGCTCCTTGGATG	NA	False	NA	-17	True	AATAAA	-15	NA	14374899	14239183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.27	chr1	-	3576	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-30	272	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	10.2268389688172	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATACGGTCAGGAGTC	NA	False	NA	NA	False	TATAAA	-24	NA	14380090	14239617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.131.28	chr1	-	3629	16	NIC	ENSMUSG00000025932.15	novel	4366	18	NA	NA	1	266	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	17.1599015796193	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATTTGTATACGGTCA	NA	False	NA	NA	False	TATAAA	-18	NA	14380342	14239623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344435_14344757_14344828_14353344_14353423_14379869
ES.131.29	chr1	-	3021	17	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-24	4	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	16.3007620604069	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCGTGTCTGGGATT	NA	False	NA	NA	False	AATAAA	-39	NA	14374876	14239885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14374796
ES.131.30	chr1	-	3121	16	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-28	2	intron_retention	FALSE	canonical	2	7	junction_15	15.1299555701778	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTACCGTGTCTGGGA	NA	False	NA	NA	False	AATAAA	-37	NA	14374880	14239887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14374648
ES.131.31	chr1	-	3423	19	NNC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-17	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.8453385866466	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAAGTCTTCCTGACC	NA	False	NA	NA	False	GATAAA	-26	NA	14380292	14240065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374235_14374332_14374648_14374699_14379869
ES.131.32	chr1	-	6489	10	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-17	708	intron_retention	FALSE	canonical	3	15	junction_9	12.7259819771973	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACTCTTGCATGTGTG	NA	False	NA	NA	False	ATTAAA	-28	NA	14374869	14277441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.33	chr1	-	1474	13	NIC	ENSMUSG00000025932.15	novel	664	7	NA	NA	-49	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.9126280564072	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATTTTTTTCCCTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	14374901	14278150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14278326_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14374796
ES.131.34	chr1	-	1533	4	ISM	ENSMUSG00000025932.15	ENSMUST00000190337.7	2199	17	50978	58301	-22100	-21018	internal_fragment	FALSE	canonical	3	50	junction_2	3.39934634239519	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTATTTATTTTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	14323816	14299167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_14299801_14301636_14301777_14322651_14322839_14323243
ES.131.35	chr1	-	1057	5	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-50	-21020	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	23.7526314331697	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTGGTATTTATTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	14374902	14299169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14299801_14322651_14322839_14323243_14323327_14374648_14374699_14374796
ES.131.36	chr1	-	5008	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTTGGCATACTGT	NA	False	NA	NA	False	AATAAA	-19	NA	14315470	14310462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_14310500_14315500
ES.131.37	chr1	-	1577	10	NNC	ENSMUSG00000025932.15	novel	725	7	NA	NA	1	12358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1530547478161	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTTTCTTGGCATAC	NA	False	NA	NA	False	AATAAA	-16	NA	14380342	14310465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_14310690_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.131.38	chr1	-	3819	4	NIC	ENSMUSG00000025932.15	novel	664	7	NA	NA	-96	-425	intron_retention	FALSE	canonical	2	7	junction_2	18.6607133363712	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGATTTAGAACTGA	NA	False	NA	NA	False	NA	NA	NA	14380156	14341423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14344828_14353344_14353423_14374648_14374699_14379869
ES.131.39	chr1	-	2202	3	ISM	ENSMUSG00000025932.15	ENSMUST00000187790.2	664	7	-248	30410	-33	19	5prime_fragment	FALSE	canonical	3	45	junction_2	5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCCTCGTAAGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	14380308	14371408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_14373122_14374648_14374699_14379869
ES.131.40	chr1	-	4030	1	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-606	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14375458	14371428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14371400_14375500
ES.131.5	chr1	-	3763	17	NIC	ENSMUSG00000025932.15	novel	3426	17	NA	NA	-42	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	14.9603643003772	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14374894	14239176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14374796
ES.131.6	chr1	-	4369	19	NNC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-2403	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	15.0268278607148	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14382862	14239176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869_14380281_14382682
ES.131.8	chr1	-	3995	18	NIC	ENSMUSG00000025932.15	novel	4347	18	NA	NA	-75	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.6402112638258	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTGGATGTCAGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	14380135	14239176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344368_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ES.1310.1	chr1	-	172	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	132020668	132020496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132020500_132020700
ES.13100.1	chr16	+	177	1	Antisense	novelGene_ENSMUSG00000022498.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	10932305	10932482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_10932300_10932500
ES.13101.1	chr16	+	3085	3	Antisense	novelGene_ENSMUSG00000022498.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCAGTTAGGAGAGTAC	NA	False	NA	NA	False	NA	NA	NA	10934701	10949250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_10934789_10940533_10940630_10946348
ES.13102.1	chr16	-	3160	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	-65	0	-65	0	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8469	False	NA	NA	False	AATAAA	-29	NA	10952579	10892774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.10	chr16	-	2855	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.1583611271123	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCGAATGTCATTTAG	8531	False	NA	NA	False	AATAAA	-25	NA	10952517	10892778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131_10952239_10952364
ES.13102.11	chr16	-	2983	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	28.318898283655	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCGAATGTCATTTAG	8529	False	NA	NA	False	AATAAA	-25	NA	10952519	10892778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.12	chr16	-	2556	11	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-32	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	41.9724909911242	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8502	False	NA	NA	False	AATAAA	-21	NA	10952546	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893407_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952481
ES.13102.13	chr16	-	7134	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	14	-8	intron_retention	FALSE	canonical	3	63	junction_6	19.1543728688777	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8548	False	NA	NA	False	AATAAA	-21	NA	10952500	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.14	chr16	-	3084	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.0817653725833	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8522	False	NA	NA	False	AATAAA	-21	NA	10952526	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911778_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.15	chr16	-	3014	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.7138861511047	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8573	False	NA	NA	False	AATAAA	-21	NA	10952475	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902724_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.16	chr16	-	3974	12	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	32.4829262208282	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8529	False	NA	NA	False	AATAAA	-21	NA	10952519	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10904758_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.17	chr16	-	2501	11	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	33	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	39.9350723049302	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8664	False	NA	NA	False	AATAAA	-21	NA	10952384	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10952131_10952234_10952359
ES.13102.18	chr16	-	2664	11	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	15	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	42.1430895877367	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8588	False	NA	NA	False	AATAAA	-21	NA	10952460	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10940533_10940632_10946350_10946568_10952131_10952234_10952359
ES.13102.19	chr16	-	2944	13	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	31.3218063903657	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8551	False	NA	NA	False	AATAAA	-21	NA	10952497	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131_10952234_10952359
ES.13102.2	chr16	-	7218	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_6	44.1219197412453	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8530	False	NA	NA	False	AATAAA	-29	NA	10952518	10892774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10914857_10914911_10922429_10922524_10934658_10934789_10940533_10940632_10946345_10946568_10952131
ES.13102.20	chr16	-	2830	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	29.0394559177682	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACTCGAATGTCAT	8574	False	NA	NA	False	AATAAA	-21	NA	10952474	10892782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10952131
ES.13102.21	chr16	-	4088	2	ISM	ENSMUSG00000022498.17	ENSMUST00000148183.2	877	3	1717	-505	1717	-9	3prime_fragment	FALSE	canonical	3	69	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGAACTCGAATGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	10900932	10892783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_10893507_10897567
ES.13102.22	chr16	-	5967	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	1	-10	intron_retention	FALSE	canonical	3	63	junction_6	20.3577994881569	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGAACTCGAATGTC	8535	False	NA	NA	False	AATAAA	-19	NA	10952513	10892784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.23	chr16	-	2749	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-14	-10	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	29.1485224949115	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGAACTCGAATGTC	8520	False	NA	NA	False	AATAAA	-19	NA	10952528	10892784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952481
ES.13102.24	chr16	-	3065	11	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	38.6704021184161	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGAACTCGAATGTC	8535	False	NA	NA	False	AATAAA	-19	NA	10952513	10892784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902276_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.25	chr16	-	3732	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	43.5969518989118	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGAACTCGAATGTC	8530	False	NA	NA	False	AATAAA	-19	NA	10952518	10892784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10904758_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131_10952234_10952359
ES.13102.27	chr16	-	4297	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	-48	-1	-9	1	multi-exon	FALSE	canonical	3	63	junction_3	22.088874288812	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTGAGATTAATGAG	8525	False	NA	NA	False	AATAAA	-15	NA	10952523	10903381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.28	chr16	-	4155	9	NNC	ENSMUSG00000022498.17	novel	4248	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.9596825592628	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTCTGAGATTAATGA	8540	False	NA	NA	False	AATAAA	-14	NA	10952508	10903382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131_10952239_10952364
ES.13102.29	chr16	-	4178	7	FSM	ENSMUSG00000022498.17	ENSMUST00000145225.8	2381	7	-81	-1716	-4	0	multi-exon	FALSE	canonical	3	19	junction_2	35.2120560162125	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTCTGAGATTAATGA	8530	False	NA	NA	False	AATAAA	-14	NA	10952518	10903382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.3	chr16	-	2840	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	37.1317307985874	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8546	False	NA	NA	False	AATAAA	-29	NA	10952502	10892774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10940533_10940632_10946350_10946568_10952131
ES.13102.30	chr16	-	3826	7	NNC	ENSMUSG00000022498.17	novel	2381	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	45.0172806326144	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGGTCTGAGATTAAT	8530	False	NA	NA	False	AATAAA	-12	NA	10952518	10903384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952481
ES.13102.31	chr16	-	2256	5	NNC	ENSMUSG00000022498.17	novel	3523	4	NA	NA	7	385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.2469511288233	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATGAGGATTTTTTTT	8541	False	NA	NA	False	AATAAA	-36	NA	10952507	10931541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10932977_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.4	chr16	-	6409	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	63	junction_5	21.439550391453	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGAATGTCATTTAGCA	8534	False	NA	NA	False	AATAAA	-27	NA	10952514	10892776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.5	chr16	-	2762	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	35.4289412280865	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGAATGTCATTTAGCA	8535	False	NA	NA	False	AATAAA	-27	NA	10952513	10892776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10952131
ES.13102.6	chr16	-	2994	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	31.9283805978835	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGAATGTCATTTAGC	8532	False	NA	NA	False	AATAAA	-26	NA	10952516	10892777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893407_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13102.8	chr16	-	3078	12	NNC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.3521718176899	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCGAATGTCATTTAG	8535	False	NA	NA	False	AATAAA	-25	NA	10952513	10892778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940545_10940632_10946350_10946568_10952131
ES.13102.9	chr16	-	5829	10	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	19	junction_5	29.8030572630095	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCGAATGTCATTTAG	8566	False	NA	NA	False	AATAAA	-25	NA	10952482	10892778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ES.13103.1	chr16	+	1682	1	Antisense	novelGene_ENSMUSG00000037965.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCAGAAACAACAAAACTA	5481	False	NA	NA	False	TATAAA	-40	NA	10966341	10968023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_10966300_10968000
ES.13104.1	chr16	+	217	1	Intergenic	novelGene_10969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTATAGGACTTGAGC	NA	False	NA	NA	False	NA	NA	NA	10975819	10976036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_10975800_10976000
ES.13105.1	chr16	-	4322	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	105	junction_12	19.807348781693	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGTGTGGTCCTTTC	NA	False	NA	0	True	AATAAA	-27	NA	10994215	10954456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.10	chr16	-	3756	23	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	45	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	40.300011279042	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994160	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971164_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.11	chr16	-	4611	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	33	-8	intron_retention	FALSE	canonical	0	0	junction_12	45.4122961761562	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994172	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10970196_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.12	chr16	-	4147	21	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	24	-8	intron_retention	FALSE	canonical	0	0	junction_4	51.5043687467384	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994181	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963505_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969034_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.13	chr16	-	3524	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	59	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_16	47.1565477956137	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994146	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.14	chr16	-	5392	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	32	junction_4	32.0850042854914	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994226	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.15	chr16	-	3821	24	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	21	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	53.9524049860682	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994184	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970055_10970196_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.16	chr16	-	5701	19	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	23	-9	intron_retention	FALSE	canonical	3	126	junction_3	16.0962575207046	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994182	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.17	chr16	-	5427	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-15	-9	intron_retention	FALSE	canonical	1	1	junction_20	46.2334024272495	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10993979	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
ES.13105.18	chr16	-	3963	19	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-9	intron_retention	FALSE	canonical	0	0	junction_18	41.259641596739	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994204	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10994083
ES.13105.19	chr16	-	5101	23	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	6985	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.4832308911311	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	7313	False	NA	-8	True	AATAAA	-19	NA	10985823	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10983970_10984068_10984396
ES.13105.2	chr16	-	3615	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	31	-7	combination_of_known_splicesites	FALSE	canonical	2	5	junction_16	40.3591377509481	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATAGTTTTGGTGTGGT	NA	False	NA	-6	True	AATAAA	-21	NA	10994174	10954462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.20	chr16	-	3927	13	ISM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	23039	9	-606	-9	intron_retention	FALSE	canonical	3	82	junction_12	26.0266956967051	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	70	False	NA	-8	True	AATAAA	-19	NA	10971218	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729
ES.13105.21	chr16	-	4307	7	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1694	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	73.9363464970601	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	7758	False	NA	-8	True	AATAAA	-19	NA	10963530	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10961774_10962183_10962293_10962402_10963150_10963509
ES.13105.22	chr16	-	3612	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	25	-9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	44.7991739476807	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994180	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.23	chr16	-	3751	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-10	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	48.7829195787869	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10993974	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
ES.13105.24	chr16	-	3685	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.5873283998188	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994204	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969177_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.25	chr16	-	3584	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.5873283998188	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10994205	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969075_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.26	chr16	-	4361	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-15	-9	intron_retention	FALSE	canonical	1	1	junction_21	38.6095637465436	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCATAGTTTTGGTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	10993979	10954464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
ES.13105.27	chr16	-	4240	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-10	intron_retention	FALSE	canonical	3	32	junction_4	33.0351973361527	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCATAGTTTTGGTGT	NA	False	NA	-9	True	AATAAA	-18	NA	10994204	10954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.28	chr16	-	3960	25	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-19	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	55.9482492775442	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCATAGTTTTGGTGT	NA	False	NA	-9	True	AATAAA	-18	NA	10993983	10954465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10983970_10984068_10984396_10984436_10993800
ES.13105.3	chr16	-	5327	20	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-7	intron_retention	FALSE	canonical	1	2	junction_4	38.9204031830802	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATAGTTTTGGTGTGGT	NA	False	NA	-6	True	AATAAA	-21	NA	10994204	10954462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.30	chr16	-	3680	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	40.3195287558395	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10994204	10954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.31	chr16	-	5277	21	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-8	-11	intron_retention	FALSE	non_canonical	0	0	junction_12	38.3417200970431	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10994214	10954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10974045_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.32	chr16	-	5555	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	33	-11	intron_retention	FALSE	canonical	0	0	junction_20	54.9574149712071	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10994172	10954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10991948_10992169_10994083
ES.13105.33	chr16	-	5628	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-11	-11	intron_retention	FALSE	canonical	0	0	junction_2	58.0989460175025	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10993975	10954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958132_10958334_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993856
ES.13105.35	chr16	-	7358	24	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	-11	intron_retention	FALSE	non_canonical	0	0	junction_4	57.096310369804	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTCATAGTTTTGGTG	NA	False	NA	-10	True	AATAAA	-17	NA	10994205	10954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10960055_10961774_10962183_10962293_10962402_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.36	chr16	-	3519	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	60.6998115333269	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTTTCATAGTTTTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	10994200	10954467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969183_10969729_10969795_10970922_10971128_10973883_10974069_10974116_10974165_10974391_10974426_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.37	chr16	-	3698	23	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	48.8929510375169	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTTTCATAGTTTTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	10993432	10954467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969193_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993376
ES.13105.38	chr16	-	3542	5	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	2313	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.6125899525736	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTTTCATAGTTTTGG	8377	False	NA	-12	True	AATAAA	-15	NA	10962911	10954468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10961557_10962578
ES.13105.39	chr16	-	3663	22	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.0382792771843	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTTTCATAGTTTTGG	NA	False	NA	-12	True	AATAAA	-15	NA	10994203	10954468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959606_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.4	chr16	-	3902	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	-84	7	-84	-7	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATAGTTTTGGTGTGGT	NA	False	NA	-6	True	AATAAA	-21	NA	10994341	10954462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.40	chr16	-	5346	20	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-13	intron_retention	FALSE	canonical	1	1	junction_15	38.4557161585005	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTTTCATAGTTTTGG	NA	False	NA	-12	True	AATAAA	-15	NA	10994204	10954468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.41	chr16	-	4773	23	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-3	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	47.0280380585493	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTTTCATAGTTTTGG	NA	False	NA	-12	True	AATAAA	-15	NA	10994209	10954468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10968343_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.42	chr16	-	3808	23	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-21	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	40.300011279042	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACTTTCATAGTTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	10994227	10954469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10977016_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.43	chr16	-	3814	23	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-13	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	40.2449113871802	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACTTTCATAGTTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	10993977	10954469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
ES.13105.44	chr16	-	4123	20	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-32	-16	intron_retention	FALSE	canonical	0	0	junction_11	59.1719874579432	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTTCATAGTTT	NA	False	NA	-15	True	AATAAA	-12	NA	10993461	10954471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969034_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993361
ES.13105.46	chr16	-	5143	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	237	intron_retention	FALSE	canonical	3	126	junction_3	16.4233827209866	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGGTTGCTAAAAAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	10994204	10954752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.47	chr16	-	2951	9	ISM	ENSMUSG00000037965.16	ENSMUST00000140755.9	2763	22	-18	13334	-17	40	5prime_fragment	FALSE	canonical	3	158	junction_3	8.61593726764535	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTAAGCCTAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	10994223	10972006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.48	chr16	-	3181	7	NIC	ENSMUSG00000037965.16	novel	2763	22	NA	NA	33	29	intron_retention	FALSE	canonical	3	162	junction_4	5.27309733985213	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	10994172	10972017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10974165_10974391_10974426_10976417_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.49	chr16	-	2959	9	NIC	ENSMUSG00000037965.16	novel	2067	16	NA	NA	4	28	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	56.2348590733541	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	10993960	10972018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10993800
ES.13105.5	chr16	-	3603	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	41.340190346302	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATAGTTTTGGTGTGGT	NA	False	NA	-6	True	AATAAA	-21	NA	10994204	10954462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.50	chr16	-	4683	9	NNC	ENSMUSG00000037965.16	novel	2763	22	NA	NA	1	28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	56.4905965626139	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	10994204	10972018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10974165_10974391_10975808_10976036_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.51	chr16	-	3106	8	NIC	ENSMUSG00000037965.16	novel	2763	22	NA	NA	7	-7	intron_retention	FALSE	canonical	3	158	junction_2	8.34950811211569	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10994198	10972053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.52	chr16	-	3729	1	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	25	-9117	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAATGCAATAATACTG	NA	False	NA	NA	False	NA	NA	NA	10994180	10990451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10990500_10994200
ES.13105.6	chr16	-	5450	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	126	junction_3	16.4233827209866	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994222	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.7	chr16	-	5368	21	NNC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	33	-8	intron_retention	FALSE	canonical	0	0	junction_11	38.4906157394241	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994172	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969034_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.8	chr16	-	3714	23	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-10	-8	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	35.4245794110005	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994216	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13105.9	chr16	-	3704	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	36.8186091171878	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATAGTTTTGGTGTGG	NA	False	NA	-7	True	AATAAA	-20	NA	10994209	10954463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ES.13106.1	chr16	-	246	1	Intergenic	novelGene_10970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCAAGGGGCTAAAGGGA	7498	False	NA	NA	False	NA	NA	NA	10998591	10998345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_10998300_10998600
ES.13107.1	chr16	-	177	1	Intergenic	novelGene_10971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAGAAAAGA	4869	False	NA	NA	False	NA	NA	NA	11001220	11001043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11001000_11001200
ES.13108.1	chr16	+	175	1	Intergenic	novelGene_10972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAGCCAAA	8406	False	NA	NA	False	NA	NA	NA	11019936	11020111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11019900_11020100
ES.13109.1	chr16	-	1914	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1160.20864906921	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTGTTGGTATTTCA	982	False	NA	0	True	ATTAAA	-28	NA	11021167	11010830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012329_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.11	chr16	-	2445	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1172.26895378151	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCTGTACTGTTGGT	1001	False	NA	-6	True	ATTAAA	-22	NA	11021148	11010836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11011773_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.14	chr16	-	1493	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1172.26895378151	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCTGTACTGTTGGT	994	False	NA	-6	True	ATTAAA	-22	NA	11021155	11010836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011348_11012478_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.16	chr16	-	2321	1	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-299	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	988	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCGCTGTACTGTTGG	8991	False	NA	-7	True	ATTAAA	-21	NA	11013158	11010837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11010800_11013200
ES.13109.2	chr16	-	1972	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	-24	-3	-24	3	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTGTTGGTATTTCA	930	False	NA	0	True	ATTAAA	-28	NA	11021219	11010830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.20	chr16	-	1858	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1155.52135825133	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTCGCTGTACTGTTG	1001	False	NA	-8	True	ATTAAA	-20	NA	11021148	11010838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019260_11020181_11020322_11021014
ES.13109.21	chr16	-	2011	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	4	-6	intron_retention	FALSE	canonical	0	0	junction_7	966.910543949129	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTCGCTGTACTGTT	958	False	NA	-9	True	ATTAAA	-19	NA	11021191	11010839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11012576_11014137_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.22	chr16	-	1866	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1178.39859555246	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTCGCTGTACTGTT	1018	False	NA	-9	True	ATTAAA	-19	NA	11021131	11010839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012323_11012576_11014137_11014252_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.24	chr16	-	1889	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	24	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1160.44958959879	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTAAAGTCGCTGTA	978	False	NA	-14	True	ATTAAA	-14	NA	11021171	11010844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017455_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.26	chr16	-	1763	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-20	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1263.67139231491	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTAAAGTCGCTGT	1001	False	NA	-15	True	ATTAAA	-13	NA	11021148	11010845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11012576_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.29	chr16	-	1884	9	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	184	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	907.175424049836	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTAAAGTCGCTG	1234	False	NA	-16	True	ATTAAA	-12	NA	11020915	11010846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11020782
ES.13109.3	chr16	-	1766	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	942.899436280866	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTGTTGGTATTTCA	996	False	NA	0	True	ATTAAA	-28	NA	11021153	11010830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11021014
ES.13109.35	chr16	-	1033	7	ISM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	28	3168	28	306	5prime_fragment	FALSE	canonical	0	0	junction_6	1034.40943967507	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGGGTGTTCAGGCTTA	982	False	NA	-2	True	AATAAA	-22	NA	11021167	11014001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.4	chr16	-	4430	8	NNC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	29	0	intron_retention	FALSE	non_canonical	0	0	junction_3	1234.55514585751	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	983	False	NA	-3	True	ATTAAA	-25	NA	11021166	11010833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11011602_11012323_11012576_11014137_11016827_11017206_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.5	chr16	-	6372	5	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	2208	junction_2	254.848361776175	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1001	False	NA	-3	True	ATTAAA	-25	NA	11021148	11010833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11012576_11014137_11017351_11017434_11017584_11019158
ES.13109.6	chr16	-	3543	7	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_6	1043.39468669446	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	994	False	NA	-3	True	ATTAAA	-25	NA	11021155	11010833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ES.13109.7	chr16	-	2785	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_7	942.899436280866	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1001	False	NA	-3	True	ATTAAA	-25	NA	11021148	11010833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11020322_11021014
ES.1311.1	chr1	-	174	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCACTG	NA	False	NA	NA	False	NA	NA	NA	132022135	132021961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132022000_132022100
ES.13110.1	chr16	+	428	2	FSM	ENSMUSG00000097537.3	ENSMUST00000181526.3	2942	2	24	2490	24	-309	multi-exon	FALSE	canonical	1	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACAAAAGAAAA	9723	False	NA	NA	False	NA	NA	NA	11021253	11041170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_11021612_11041100
ES.13110.2	chr16	+	691	4	NNC	ENSMUSG00000097537.3	novel	517	3	NA	NA	73	-309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACAAAAGAAAA	9772	False	NA	NA	False	NA	NA	NA	11021302	11041170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_11021612_11024744_11024972_11025355_11025441_11041100
ES.13110.3	chr16	+	2291	15	Genic_Genomic	ENSMUSG00000097537.3	novel	2942	2	NA	NA	17032	8079	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACCTCTCGCTACCAC	6471	False	NA	NA	False	NA	NA	NA	11038590	11072144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_11038739_11040443_11040617_11041074_11041168_11042285_11042458_11045978_11046059_11047071_11047167_11048373_11048515_11048700_11048859_11050398_11050573_11053225_11053305_11055391_11055429_11056735_11056961_11058529_11058570_11058666_11058705_11071506
ES.13110.4	chr16	+	4799	2	Antisense	novelGene_ENSMUSG00000062203.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATGTA	NA	False	NA	NA	False	NA	NA	NA	11044172	11049157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_11048515_11048700
ES.13110.5	chr16	+	3223	4	Antisense	novelGene_ENSMUSG00000062203.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11047723	11055325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_11048510_11048695_11048859_11050398_11050573_11053225
ES.13110.7	chr16	+	1465	1	Antisense	novelGene_ENSMUSG00000062203.16_AS_novelGene_ENSMUSG00000088544.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGTAATAGACAAAGTTG	5555	False	NA	NA	False	AATAAA	-24	NA	11071891	11073356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_11071900_11073400
ES.13111.1	chr16	+	178	1	Intergenic	novelGene_10974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGTAGGG	2712	False	NA	NA	False	NA	NA	NA	11080590	11080768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11080600_11080800
ES.13112.1	chr16	+	177	1	Intergenic	novelGene_10975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTATATAAAA	2908	False	NA	NA	False	NA	NA	NA	11080786	11080963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11080800_11081000
ES.13113.1	chr16	+	171	1	Intergenic	novelGene_10979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11099892	11100063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11099900_11100100
ES.13114.10	chr16	-	6135	15	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-22	2703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	408.488627973501	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTTGTCTGTTTAT	NA	False	NA	-3	True	AATAAA	-19	NA	11072095	11034452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071754
ES.13114.16	chr16	-	5148	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	60	-1492	-1	1492	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGACCTATATGTAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	11072074	11035663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.18	chr16	-	4780	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-120	-1762	-4	1002	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCTGTAACAAGATAAT	NA	False	NA	69	True	TATAAA	-14	NA	11072193	11036153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.19	chr16	-	4693	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	-55	-922	0	922	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCTTGTTTTTTATT	NA	False	NA	-11	True	ATTAAA	-5	NA	11072189	11036233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.20	chr16	-	5938	14	NIC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	3	915	intron_retention	FALSE	canonical	3	773	junction_11	232.202701695213	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACATTTTCTCCTTGTT	NA	False	NA	-18	True	TATAAA	-6	NA	11072131	11036240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.22	chr16	-	4382	15	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-1	730	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_3	419.530811789571	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAATGTAATTGTCAT	NA	False	NA	NA	False	AGTAAA	-28	NA	11072074	11036425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041162_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.24	chr16	-	3778	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-109	-771	7	11	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCTGGGCTTTTATTT	NA	False	NA	NA	False	ATTAAA	-32	NA	11072182	11037144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.25	chr16	-	3631	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-71	-662	-10	-98	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATGAGTTGGTGTCTC	NA	False	NA	NA	False	CATAAA	-30	NA	11072144	11037253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.27	chr16	-	3242	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-60	-284	1	284	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACAGAATAGGTTTTAT	NA	False	NA	NA	False	CATAAA	-14	NA	11072133	11037631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.28	chr16	-	3135	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	-137	-100	-21	100	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGATTTCTCTCAGAG	NA	False	NA	NA	False	AGTAAA	-19	NA	11072210	11037815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.3	chr16	-	6707	16	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-38	3052	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	390.942769326776	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCCTCTTTTTTA	NA	False	NA	-3	True	AATAAA	-16	NA	11072227	11034103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506_11072014_11072170
ES.13114.30	chr16	-	2895	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	-40	861	15	-101	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTTTACTAACTATGT	NA	False	NA	NA	False	CATAAA	-20	NA	11072174	11038016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.31	chr16	-	2848	3	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	29043	104	-668	-104	intron_retention	FALSE	canonical	3	1391	junction_2	228.5	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTGCTTTACTAACTA	NA	False	NA	NA	False	CATAAA	-17	NA	11043030	11038019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_11038744_11040448_11040618_11041075
ES.13114.34	chr16	-	3666	4	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	26868	343	1176	6	3prime_fragment	FALSE	canonical	3	1391	junction_2	199.270335641476	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTATTTGAATTGCTTT	NA	False	NA	-11	True	AATAAA	-19	NA	11045205	11038258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283
ES.13114.36	chr16	-	2576	15	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	506.242969212957	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGTATTTGAATTGCTT	NA	False	NA	-12	True	AATAAA	-18	NA	11072141	11038259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048517_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056916_11058529_11058572_11058668_11058705_11071506
ES.13114.37	chr16	-	4283	14	NIC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-27	2	intron_retention	FALSE	canonical	3	773	junction_11	177.057841650521	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGGTATTTGAATTG	NA	False	NA	-15	True	AATAAA	-15	NA	11072100	11038262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.38	chr16	-	3177	15	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	408.604843788405	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGGTATTTGAATTG	NA	False	NA	-15	True	AATAAA	-15	NA	11072193	11038262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055935_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.39	chr16	-	2475	15	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	425.191415477686	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11072074	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040542_11041071_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.40	chr16	-	2456	14	NIC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	413.488464239538	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11072074	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.41	chr16	-	2377	14	NIC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	400.577379149635	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11072073	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11038744_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.42	chr16	-	6924	8	NIC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	1734	0	intron_retention	FALSE	canonical	3	1176	junction_7	195.649415735266	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11053950	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11038744_11040448_11040618_11041075_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229
ES.13114.44	chr16	-	6077	9	NIC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-353	0	intron_retention	FALSE	canonical	3	1176	junction_8	96.0656513796685	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11056037	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229
ES.13114.45	chr16	-	2559	15	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	426.782767473389	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11072095	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058696_11071506
ES.13114.46	chr16	-	2530	16	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	390.942769326776	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCGGTATTTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	11072211	11038264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506_11072014_11072170
ES.13114.48	chr16	-	2486	15	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_8	400.349878868727	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTTTCGGTATTTGA	NA	False	NA	-19	True	AATAAA	-11	NA	11072132	11038266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050515_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13114.51	chr16	-	2509	8	NIC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-4129	-2	intron_retention	FALSE	canonical	3	1334	junction_6	170.272770361355	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTTTCGGTATTTGA	NA	False	NA	-19	True	AATAAA	-11	NA	11050510	11038266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11047167_11048373_11048515_11048700_11048856_11050395
ES.13114.52	chr16	-	2540	16	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	409.505696609407	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTTTCGGTATTTGA	NA	False	NA	-19	True	AATAAA	-11	NA	11072226	11038266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506_11072014_11072170
ES.13114.53	chr16	-	2539	15	NNC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	426.396319670528	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTTTCGGTATTTGA	NA	False	NA	-19	True	AATAAA	-11	NA	11072074	11038266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050401_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ES.13114.54	chr16	-	175	2	Intergenic	novelGene_10973	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAACTTTATTCGT	NA	False	NA	NA	False	NA	NA	NA	11116460	11057759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11057811_11116336
ES.13114.55	chr16	-	156	1	Intergenic	novelGene_10976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11092096	11091940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11091900_11092100
ES.13114.56	chr16	-	188	1	Intergenic	novelGene_10977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTAGCCCTTATTAGT	NA	False	NA	NA	False	NA	NA	NA	11093965	11093777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11093800_11094000
ES.13114.57	chr16	-	1707	2	Intergenic	novelGene_10978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	11100166	11098263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11098408_11098603
ES.13114.58	chr16	-	165	1	Intergenic	novelGene_10980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11116460	11116295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11116300_11116500
ES.13114.7	chr16	-	6182	16	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-22	2706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	394.89742127967	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTCTGTTTATAAT	NA	False	NA	0	True	AATAAA	-22	NA	11072211	11034449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506_11071851_11072170
ES.13114.9	chr16	-	6372	15	NNC	ENSMUSG00000062203.16	novel	2898	15	NA	NA	-17	2703	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_6	406.155802265936	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTTGTCTGTTTAT	NA	False	NA	-3	True	AATAAA	-19	NA	11072090	11034452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048379_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ES.13115.1	chr16	+	175	1	Intergenic	novelGene_10981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAATATCTTATAGCTG	NA	False	NA	NA	False	NA	NA	NA	11122221	11122396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11122200_11122400
ES.13116.1	chr16	+	6333	21	NIC	ENSMUSG00000071669.15	novel	2667	21	NA	NA	-23	3640	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.01827765455731	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGTCTAGATTCTTT	NA	False	NA	24	True	ATTAAA	-36	NA	11140748	11576976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_11140843_11165722_11165785_11167769_11167823_11185540_11185666_11213082_11213264_11217628_11217700_11218664_11218914_11221323_11221697_11231089_11231221_11236686_11236763_11238564_11238648_11263028_11263093_11265243_11265373_11328823_11328907_11389562_11389670_11449321_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
ES.13116.2	chr16	+	2652	21	NIC	ENSMUSG00000071669.15	novel	2667	21	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.01827765455731	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGGGTCTCTGTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	11140789	11573336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_11140843_11165722_11165785_11167769_11167823_11185540_11185666_11213082_11213264_11217628_11217700_11218664_11218914_11221323_11221697_11231089_11231221_11236686_11236763_11238564_11238648_11263028_11263093_11265243_11265373_11328823_11328907_11389562_11389670_11449321_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
ES.13116.3	chr16	+	5536	20	NIC	ENSMUSG00000071669.15	novel	2667	21	NA	NA	18	2937	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	3.34614343689523	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAGTTCAGGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	11140789	11576273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_11140843_11165722_11165785_11185540_11185666_11213082_11213264_11217628_11217700_11218664_11218914_11221323_11221697_11231089_11231221_11236686_11236763_11238564_11238648_11263028_11263093_11265243_11265373_11328823_11328907_11389562_11389670_11449321_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
ES.13116.4	chr16	+	6445	2	Intergenic	novelGene_10982	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATTTGTGTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	11175171	11182009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11179016_11179408
ES.13116.5	chr16	+	182	1	Intergenic	novelGene_10983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACCCAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	11190922	11191104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11190900_11191100
ES.13116.6	chr16	+	309	1	Intergenic	novelGene_10984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	11190924	11191233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11190900_11191200
ES.13116.7	chr16	+	6380	1	Intergenic	novelGene_10985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTACCTGAGTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	11201285	11207665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_11201300_11207700
ES.13116.8	chr16	+	4597	7	NNC	ENSMUSG00000071669.15	novel	2667	21	NA	NA	173016	3622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.22952584681651	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTCTTCTCTGTGGTT	NA	False	NA	6	True	ATTAAA	-18	NA	11438187	11576958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_11438351_11449321_11449439_11473999_11474056_11478409_11478492_11532777_11532919_11556157_11556298_11573060
ES.13117.1	chr16	-	164	1	Intergenic	novelGene_10986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	11230870	11230706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11230700_11230900
ES.13118.1	chr16	-	191	1	Intergenic	novelGene_10987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	5218	False	NA	NA	False	NA	NA	NA	11283087	11282896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11282900_11283100
ES.13119.1	chr16	-	1598	1	Intergenic	novelGene_10988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTCTCGGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	11331832	11330234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_11330200_11331800
ES.1312.1	chr1	-	3092	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	-34	1297	-34	1052	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTGCACCGGCCCTG	563	False	NA	NA	False	ATTAAA	-18	NA	132067456	132041271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.10	chr1	-	2926	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-11	932	intron_retention	FALSE	canonical	1	1	junction_2	40.877377606691	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	586	False	NA	-2	True	AATATA	-23	NA	132067433	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043258_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.11	chr1	-	2880	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	932	intron_retention	FALSE	canonical	0	0	junction_11	42.6074272532719	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	598	False	NA	-2	True	AATATA	-23	NA	132067421	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.12	chr1	-	3417	14	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-18	932	intron_retention	FALSE	canonical	3	137	junction_4	13.2548974983705	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	579	False	NA	-2	True	AATATA	-23	NA	132067440	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132050199_132067147
ES.1312.14	chr1	-	2976	15	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	932	intron_retention	FALSE	canonical	2	11	junction_6	39.8577188898467	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	598	False	NA	-2	True	AATATA	-23	NA	132067421	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044440_132044621_132044720_132045219_132045274_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.15	chr1	-	3199	14	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	932	intron_retention	FALSE	canonical	3	144	junction_5	13.3048018203688	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	-2	True	AATATA	-23	NA	132067422	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.17	chr1	-	3311	14	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	932	intron_retention	FALSE	canonical	1	2	junction_5	43.6136887473858	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	-2	True	AATATA	-23	NA	132067422	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132044228_132044333_132044440_132044621_132044720_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.18	chr1	-	2928	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	932	intron_retention	FALSE	canonical	0	0	junction_14	41.1379251894026	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	598	False	NA	-2	True	AATATA	-23	NA	132067421	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049846_132050049_132050199_132067147
ES.1312.19	chr1	-	3060	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	932	intron_retention	FALSE	canonical	0	0	junction_12	54.5166233567544	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	598	False	NA	-2	True	AATATA	-23	NA	132067421	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047814_132049185_132049384_132049774_132049855_132050049_132050199_132067147
ES.1312.2	chr1	-	3034	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	1052	intron_retention	TRUE	canonical	1	1	junction_2	40.877377606691	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTGCACCGGCCCTG	598	False	NA	NA	False	ATTAAA	-18	NA	132067421	132041271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043258_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.20	chr1	-	2917	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-9	927	intron_retention	FALSE	canonical	0	0	junction_6	41.1698919114442	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	588	False	NA	-7	True	AATATA	-18	NA	132067431	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044695_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.21	chr1	-	2833	15	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	927	intron_retention	FALSE	canonical	0	0	junction_9	55.7051732474697	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	598	False	NA	-7	True	AATATA	-18	NA	132067421	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046837_132046953_132047705_132047759_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.22	chr1	-	2869	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	927	intron_retention	FALSE	canonical	2	6	junction_10	39.7600581264945	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	598	False	NA	-7	True	AATATA	-18	NA	132067421	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046620_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.23	chr1	-	2856	15	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	927	intron_retention	FALSE	non_canonical	0	0	junction_8	53.4220775274318	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	598	False	NA	-7	True	AATATA	-18	NA	132067421	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045597_132046587_132046683_132046835_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.25	chr1	-	3088	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	927	intron_retention	FALSE	canonical	3	137	junction_4	13.8691038216723	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	597	False	NA	-7	True	AATATA	-18	NA	132067422	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.26	chr1	-	2822	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-10	927	intron_retention	FALSE	canonical	1	2	junction_6	42.1225738113164	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	587	False	NA	-7	True	AATATA	-18	NA	132067432	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.28	chr1	-	3038	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	927	intron_retention	FALSE	canonical	3	144	junction_5	13.1607021709578	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	598	False	NA	-7	True	AATATA	-18	NA	132067421	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.29	chr1	-	3450	14	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	4	927	intron_retention	FALSE	canonical	3	144	junction_4	13.6559586664793	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGTGAGCAGTCTC	680	False	NA	-7	True	AATATA	-18	NA	132067339	132041396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.3	chr1	-	3013	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	1051	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGCACCGGCCCT	598	False	NA	NA	False	ATTAAA	-17	NA	132067421	132041272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.31	chr1	-	3346	14	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-1	925	intron_retention	FALSE	canonical	1	1	junction_11	42.8441513135124	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGCAGTGAGCAGTC	675	False	NA	-9	True	AATATA	-16	NA	132067344	132041398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046953_132047705_132047763_132049185_132049384_132049774_132049855_132050049_132050199_132067147
ES.1312.33	chr1	-	2879	14	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	38	925	intron_retention	FALSE	non_canonical	0	0	junction_4	58.5031228620779	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGCAGTGAGCAGTC	635	False	NA	-9	True	AATATA	-16	NA	132067384	132041398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044440_132044620_132044720_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.35	chr1	-	2948	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	1	925	intron_retention	FALSE	canonical	0	0	junction_14	41.1379251894026	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGCAGTGAGCAGTC	598	False	NA	-9	True	AATATA	-16	NA	132067421	132041398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049873_132050049_132050199_132067147
ES.1312.36	chr1	-	2324	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	77	1954	-2	395	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCACCTATGTCCTTC	674	False	NA	NA	False	NA	NA	NA	132067345	132041928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.37	chr1	-	2180	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-35	146	intron_retention	FALSE	canonical	1	1	junction_13	40.8059908455718	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACCTCCTCTTGTCAC	641	False	NA	NA	False	NA	NA	NA	132067378	132042177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049384_132049774_132049855_132050049_132050199_132067147
ES.1312.38	chr1	-	2143	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	1	2211	1	138	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTAGTACCTCCT	598	False	NA	NA	False	NA	NA	NA	132067421	132042185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.4	chr1	-	3168	17	NNC	ENSMUSG00000026437.12	novel	1705	17	NA	NA	-669	934	intron_retention	FALSE	canonical	0	0	junction_16	39.8649575912229	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCAGTCTCATTCAGA	NA	False	NA	0	True	AATATA	-25	NA	132068091	132041389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147_132067365_132067805
ES.1312.7	chr1	-	2906	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	-11	932	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	586	False	NA	-2	True	AATATA	-23	NA	132067433	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ES.1312.8	chr1	-	3539	14	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	34	932	intron_retention	FALSE	canonical	0	0	junction_7	57.1608340277288	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	710	False	NA	-2	True	AATATA	-23	NA	132067309	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132045612_132046258_132046317_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049384_132049774_132049855_132050049_132050199_132067147
ES.1312.9	chr1	-	3010	16	NNC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	932	intron_retention	FALSE	canonical	1	1	junction_13	40.8059908455718	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	-2	True	AATATA	-23	NA	132067422	132041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049384_132049774_132049855_132050049_132050199_132067147
ES.13120.1	chr16	-	2456	3	NIC	ENSMUSG00000065979.13	novel	2663	4	NA	NA	0	39	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	50.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCTGAATGTTC	NA	False	NA	-1	True	NA	NA	NA	11727260	11621545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_11623448_11646038_11646462_11727129
ES.13120.2	chr16	-	2742	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	-40	-39	-18	39	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCTGAATGTTC	NA	False	NA	-1	True	NA	NA	NA	11727327	11621545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ES.13120.3	chr16	-	2812	5	NNC	ENSMUSG00000065979.13	novel	2663	4	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.6364711606846	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAATAA	NA	False	NA	-53	True	NA	NA	NA	11727276	11621597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11623448_11646038_11646462_11703436_11703610_11705441_11705661_11727129
ES.13120.4	chr16	-	2388	4	NNC	ENSMUSG00000065979.13	novel	2663	4	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9444048184931	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAATAA	NA	False	NA	-53	True	NA	NA	NA	11727275	11621597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11623448_11703436_11703610_11705441_11705661_11727129
ES.13120.5	chr16	-	1193	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	17	1453	-8	-1447	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACGGGTGTTTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	11727270	11623037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ES.13120.6	chr16	-	1034	4	NNC	ENSMUSG00000065979.13	novel	783	4	NA	NA	-4	4116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6223728418147	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTATACAGATTTGC	NA	False	NA	NA	False	NA	NA	NA	11727291	11640997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_11641228_11646038_11646462_11705441_11705661_11727129
ES.13120.7	chr16	-	1629	2	ISM	ENSMUSG00000065979.13	ENSMUST00000073371.7	1922	3	21762	0	21713	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATTGCTTCTTAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	11705547	11702086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_11703610_11705441
ES.13121.1	chr16	-	190	1	Intergenic	novelGene_10989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12386068	12385878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_12385900_12386100
ES.13122.1	chr16	+	178	1	Intergenic	novelGene_10990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGTGACTATA	NA	False	NA	NA	False	NA	NA	NA	12431380	12431558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_12431400_12431600
ES.13123.1	chr16	-	3249	1	Intergenic	novelGene_10991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	12512825	12509576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_12509600_12512800
ES.13124.1	chr16	+	2428	8	NNC	ENSMUSG00000101565.3	novel	574	3	NA	NA	-23418	1150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.349927106111883	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGCATACATCTGTTGG	NA	False	NA	NA	False	NA	NA	NA	12595024	12667667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12595189_12614033_12614164_12614334_12614461_12619995_12620241_12636026_12636078_12640029_12640098_12664990_12665170_12666202
ES.13124.2	chr16	+	2262	5	NNC	ENSMUSG00000101565.3	novel	574	3	NA	NA	-23391	-14398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACTGTATATATTT	NA	False	NA	NA	False	ACTAAA	-42	NA	12595051	12621764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12595189_12611018_12611124_12614004_12614164_12614368_12614461_12619995
ES.13124.3	chr16	+	5628	4	NNC	ENSMUSG00000101565.3	novel	574	3	NA	NA	-23375	-16522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAAGTTGGTTGTTGTT	NA	False	NA	NA	False	AAGAAA	-8	NA	12595067	12619640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12595189_12611018_12611124_12614033_12614164_12614368
ES.13125.1	chr16	+	3859	1	Intergenic	novelGene_10992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	12795559	12799418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_12795600_12799400
ES.13126.1	chr16	+	3657	12	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	-363	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7662054102952	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12927184	12966598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12927269_12927454_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.10	chr16	+	3728	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	38	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	14.2270868416553	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927585	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
ES.13126.11	chr16	+	3891	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	43	-454	43	454	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAATGCCACGTGAATT	NA	False	NA	NA	False	AGTAAA	-14	NA	12927590	12967052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.12	chr16	+	3158	7	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	53	3285	intron_retention	FALSE	non_canonical	0	0	junction_5	27.4631065653946	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCGTACCCTGCTCAT	NA	False	NA	NA	False	NA	NA	NA	12927600	12948779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12944388_12945416_12945530_12947997
ES.13126.13	chr16	+	3408	11	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.2405947071645	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927601	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939875_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.14	chr16	+	5547	10	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	54	-2	intron_retention	FALSE	canonical	3	54	junction_5	8.2192186706253	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927601	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12950815_12962264_12962378_12965389
ES.13126.15	chr16	+	9113	9	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	88	8741	88	-4498	5prime_fragment	FALSE	canonical	0	0	junction_8	23.8560133928534	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	12927635	12957857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721
ES.13126.16	chr16	+	2513	8	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	103	17449	103	3655	5prime_fragment	FALSE	canonical	3	54	junction_5	9.19183310979738	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGTACCAAGTTTTC	NA	False	NA	NA	False	CATAAA	-17	NA	12927650	12949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997
ES.13126.17	chr16	+	3300	11	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	104	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.2405947071645	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927651	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939933_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.18	chr16	+	3438	12	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	104	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.3598255638016	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGTTTGAGCTCCAA	NA	False	NA	20	True	AATAAA	-23	NA	12927651	12966607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962100_12962154_12962264_12962378_12965389
ES.13126.2	chr16	+	3823	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	-343	0	-343	0	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12927204	12966598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.21	chr16	+	3070	3	NIC	ENSMUSG00000022545.14	novel	5130	10	NA	NA	-7674	3655	intron_retention	FALSE	canonical	3	59	junction_1	7.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGTACCAAGTTTTC	NA	False	NA	NA	False	CATAAA	-17	NA	12942580	12949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_12944388_12945418_12945530_12947997
ES.13126.22	chr16	+	2544	6	ISM	ENSMUSG00000022545.14	ENSMUST00000129049.2	5130	10	14599	1885	-5998	-2	3prime_fragment	FALSE	canonical	3	27	junction_3	16.166632302369	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12944256	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
ES.13126.23	chr16	+	5202	4	ISM	ENSMUSG00000022545.14	ENSMUST00000129049.2	5130	10	18706	-1381	-1891	1381	3prime_fragment	FALSE	canonical	3	27	junction_1	17.7200451466693	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACGTAGACCACTCGT	NA	False	NA	NA	False	AATAAA	-24	NA	12948363	12969862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12948887_12950721_12950815_12962264_12962378_12965389
ES.13126.24	chr16	+	7020	4	NNC	ENSMUSG00000022545.14	novel	5130	10	NA	NA	-202	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4302481094059	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12950052	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12951504_12957904_12962154_12962264_12962378_12965389
ES.13126.25	chr16	+	6133	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	796	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12951050	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12951504_12957904_12962378_12965389
ES.13126.26	chr16	+	6448	2	ISM	ENSMUSG00000022545.14	ENSMUST00000129049.2	5130	10	27481	1883	6884	0	3prime_fragment	FALSE	canonical	3	66	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12957138	12966598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12962378_12965389
ES.13126.27	chr16	+	4775	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	10810	1374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTCTTTACGTAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	12961064	12969855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12961261_12962264_12962378_12965389
ES.13126.28	chr16	+	3349	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	11759	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCCTTGCTTAAGCACCT	NA	False	NA	NA	False	AAAAAG	-13	NA	12962013	12968485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12962154_12962264_12962378_12965389
ES.13126.29	chr16	+	4706	3	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	11789	1391	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	31.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCACTCGTGCCTTCTCCC	NA	False	NA	NA	False	AATAAA	-34	NA	12962043	12969872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12962154_12962264_12962378_12965389
ES.13126.3	chr16	+	4032	11	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	-319	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.466252583998	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927228	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948834_12950721_12950815_12962264_12962378_12965389
ES.13126.30	chr16	+	3393	2	ISM	ENSMUSG00000022545.14	ENSMUST00000129049.2	5130	10	32390	29	11793	-29	3prime_fragment	FALSE	canonical	3	66	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAGAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12962047	12968452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12962378_12965389
ES.13126.4	chr16	+	3523	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	-72	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	27.2405947071645	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGGTTTCTCAGTGT	NA	False	NA	9	True	AATAAA	-12	NA	12927475	12966596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_12928006_12929594_12929749_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.5	chr16	+	3578	12	NNC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	-47	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.9169370078601	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTTGGTTTCTCAGT	NA	False	NA	7	True	AATAAA	-10	NA	12927500	12966594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943298_12944258_12944388_12945418_12945530_12947997_12948599_12948833_12948887_12950721_12950815_12962264_12962378_12965389
ES.13126.7	chr16	+	6745	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	4	-3269	4	1386	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTAGACCACTCGTGCCTT	NA	False	NA	NA	False	AATAAA	-29	NA	12927551	12969867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ES.13126.8	chr16	+	1823	6	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	6	21735	6	-631	5prime_fragment	FALSE	canonical	3	54	junction_5	9.76933979345585	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCCGTGTTCAGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	12927553	12944863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258
ES.13126.9	chr16	+	2099	8	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	15	17951	15	3153	5prime_fragment	FALSE	canonical	3	54	junction_5	9.19183310979738	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGTGGCTTTCTTACC	NA	False	NA	NA	False	AATACA	-12	NA	12927562	12948647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997
ES.13127.1	chr16	-	3383	2	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATGAAAGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	12927953	12917419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12917622_12924772
ES.13128.1	chr16	-	3664	2	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTCTCATTCTGGG	8264	False	NA	NA	False	NA	NA	NA	12937668	12931760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12935006_12937249
ES.13128.2	chr16	-	3312	2	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCATTGGGGTCATCT	8276	False	NA	NA	False	NA	NA	NA	12937656	12931852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12935006_12937497
ES.13128.3	chr16	-	4990	6	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGGAAAGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	12948783	12936480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12940054_12941195_12941404_12943112_12943294_12944256_12944386_12945416_12945527_12947994
ES.13128.4	chr16	-	3934	7	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGGAAAGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	12948783	12936480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12937173_12938228_12940054_12941195_12941404_12943112_12943294_12944256_12944386_12945416_12945527_12947994
ES.13128.5	chr16	-	5953	5	Antisense	novelGene_ENSMUSG00000022545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGGAAAGCTGTATA	NA	False	NA	NA	False	NA	NA	NA	12948783	12936480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_12940054_12941195_12941404_12943112_12944386_12945416_12945527_12947994
ES.13129.1	chr16	+	4220	16	NNC	ENSMUSG00000009569.15	novel	618	4	NA	NA	-412	-4232	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.6106028668338	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGGCATGCAGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	13073932	13228695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074162_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.10	chr16	+	590	4	NIC	ENSMUSG00000009569.15	novel	667	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	23.2139804619735	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTATTTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	13074380	13150783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13074419_13082942_13083004_13144245_13144436_13150482
ES.13129.11	chr16	+	4542	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	44	1229	19	-1229	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTGACCAGAGTATG	NA	False	NA	NA	False	NA	NA	NA	13074388	13231698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.12	chr16	+	3212	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	46	5039	21	-5039	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATCAGGGCTACAGATA	NA	False	NA	NA	False	ATTAAA	-15	NA	13074390	13227888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.13	chr16	+	4026	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	47	4224	22	-4224	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGCAGTTTTTGCTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	13074391	13228703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.15	chr16	+	5135	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	47	633	22	-633	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTCTATTGCTTTTTA	NA	False	NA	NA	False	AGTAAA	-21	NA	13074391	13232294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.16	chr16	+	3944	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	47	1824	22	-1824	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGTCTACAAGATACTG	NA	False	NA	NA	False	NA	NA	NA	13074391	13231103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.17	chr16	+	4015	16	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	22	-4227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.1054247405773	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCATGCAGTTTTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	13074391	13228700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144436_13196135_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.18	chr16	+	8469	16	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	23	-8	intron_retention	FALSE	canonical	0	0	junction_9	20.5970871727048	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGATTTTGTGTGTAC	NA	False	NA	5	True	AATAAA	-14	NA	13074392	13235385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13214811_13216351_13217943_13218044_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.19	chr16	+	4413	17	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	28	-1627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.4566427184611	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAGTCAGATATCTCTA	NA	False	NA	NA	False	AGTAAA	-27	NA	13074397	13231300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212408_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.20	chr16	+	5149	1	Intergenic	novelGene_10993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACGTGACTGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	13154606	13159755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13154600_13159800
ES.13129.21	chr16	+	3770	2	NNC	ENSMUSG00000009569.15	novel	8295	15	NA	NA	54649	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTGTGTACAGAGAAA	NA	False	NA	12	True	AATAAA	-21	NA	13230933	13235392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13232892_13233580
ES.13129.3	chr16	+	8269	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	12	-2466	12	0	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTGTACAGAGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	13074356	13235393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.4	chr16	+	3623	16	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	-7	-4671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7518700110408	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTACAGTATGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	13074362	13228256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074434_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.5	chr16	+	3613	16	ISM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	19	4665	-6	-4665	5prime_fragment	FALSE	canonical	2	22	junction_10	14.5961943289643	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTATGTTGCCTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	13074363	13228262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480
ES.13129.6	chr16	+	4448	18	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	-4	-1267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.3587511393359	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGATCTAGTGATT	NA	False	NA	NA	False	NA	NA	NA	13074365	13231660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144286_13144367_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202054_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.7	chr16	+	4150	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	29	1636	4	-1636	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACTTGTAATAAGTCAG	NA	False	NA	NA	False	AGTAAA	-18	NA	13074373	13231291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ES.13129.8	chr16	+	3304	16	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	5	-8517	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.342305370266	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTGTCTCTTGTGAGG	NA	False	NA	NA	False	AATAAA	-16	NA	13074374	13224410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13223926
ES.13129.9	chr16	+	4236	9	NNC	ENSMUSG00000009569.15	novel	5815	17	NA	NA	8	-25615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.4705712539001	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAACTCTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	13074377	13207312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202054_13202220_13203469_13203649_13203910
ES.1313.1	chr1	+	176	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAGAGCAAGAG	NA	False	NA	NA	False	NA	NA	NA	132082906	132083082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132082900_132083100
ES.13130.1	chr16	-	1305	1	Intergenic	novelGene_10994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCAGATC	NA	False	NA	NA	False	NA	NA	NA	13168113	13166808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13166800_13168100
ES.13131.1	chr16	-	4156	3	Intergenic	novelGene_10995	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACTATGCACAA	NA	False	NA	NA	False	NA	NA	NA	13234500	13192603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13196507_13197787_13197953_13234412
ES.13131.2	chr16	-	2514	1	Antisense	novelGene_ENSMUSG00000009569.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAAGGTCTGACAGCA	NA	False	NA	NA	False	NA	NA	NA	13212767	13210253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_13210300_13212800
ES.13131.3	chr16	-	817	3	NNC	ENSMUSG00000087526.3	novel	1051	8	NA	NA	-12076	3278	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATGGTGCTGTTGTGGC	NA	False	NA	NA	False	AATAAA	-15	NA	13234622	13211497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13212012_13222457_13222551_13234412
ES.13132.1	chr16	-	176	1	Intergenic	novelGene_10996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTAAGCGAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	13290023	13289847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13289800_13290000
ES.13133.1	chr16	+	2703	1	Intergenic	novelGene_10997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGATAAGCAAAATTCATT	NA	False	NA	NA	False	NA	NA	NA	13379600	13382303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13379600_13382300
ES.13133.2	chr16	+	2638	2	Antisense	novelGene_ENSMUSG00000022685.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATAAGCAAAATTCATTT	NA	False	NA	NA	False	NA	NA	NA	13379600	13382304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_13381174_13381239
ES.13134.1	chr16	+	197	1	Intergenic	novelGene_10999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	13419582	13419779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13419600_13419800
ES.13135.1	chr16	+	3102	1	Intergenic	novelGene_11000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGATATGGAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	13426545	13429647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13426500_13429600
ES.13135.2	chr16	+	2869	2	Antisense	novelGene_ENSMUSG00000022685.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCATGGATATGGAAAGG	NA	False	NA	NA	False	ATTAAA	-44	NA	13426545	13429645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_13427176_13427406
ES.13136.1	chr16	+	213	1	Intergenic	novelGene_11001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTGAACATCAACTTCAG	NA	False	NA	NA	False	NA	NA	NA	13432631	13432844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13432600_13432800
ES.13136.10	chr16	+	1664	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	34	4294	34	29	5prime_fragment	FALSE	canonical	3	82	junction_1	11.6105794668292	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTCTACCTTGGCT	NA	False	NA	NA	False	AATAAA	-8	NA	13489755	13517182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
ES.13136.11	chr16	+	1787	4	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	38	13795	38	1845	5prime_fragment	FALSE	canonical	3	82	junction_1	10.3708994574027	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGTAACATT	NA	False	NA	NA	False	NA	NA	NA	13489759	13507681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619
ES.13136.12	chr16	+	5938	7	ISM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	54	0	-38	0	intron_retention	FALSE	canonical	3	82	junction_1	11.6105794668292	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13489775	13521476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736
ES.13136.13	chr16	+	4054	7	NIC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	9	2	intron_retention	FALSE	canonical	3	82	junction_1	10.6092203085597	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAACCTTTATAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	13489822	13521468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13489943_13502925_13503263_13505254_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.14	chr16	+	2062	9	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	10	-901	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	40.5383691704538	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	13489823	13520565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13508121_13508194_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.15	chr16	+	3096	3	NNC	ENSMUSG00000079737.5	novel	1705	2	NA	NA	31	1315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTATTTATATGTATG	NA	False	NA	NA	False	NA	NA	NA	13489823	13497567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13489943_13494267_13494375_13494697
ES.13136.16	chr16	+	1879	5	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	10	1849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5061723691588	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGTAACATTTAAG	NA	False	NA	NA	False	NA	NA	NA	13489823	13507685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13489943_13502925_13503263_13504681_13504834_13505254_13505460_13506619
ES.13136.17	chr16	+	4248	7	NIC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	82	junction_1	11.3198449145246	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTATAGAGAAATCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	13489841	13521475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13516940_13519928
ES.13136.18	chr16	+	2479	6	FSM	ENSMUSG00000022684.16	ENSMUST00000069281.8	2456	6	-21	-2	12	2	multi-exon	FALSE	canonical	0	0	junction_2	39.296819209702	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAACCTTTATAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	13489862	13521468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13502925_13503263_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.19	chr16	+	2791	8	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.8815463589469	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAACCTTTATAGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	13489864	13521468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13489943_13502986_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.2	chr16	+	175	2	Intergenic	novelGene_11002	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCTG	NA	False	NA	NA	False	NA	NA	NA	13432633	13581058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13432713_13580962
ES.13136.20	chr16	+	3403	7	NNC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	-11	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.6141429027051	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCCTCAGGCTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	13489872	13517194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13513352_13515371_13516736
ES.13136.21	chr16	+	3622	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	-6	-2005	-6	2002	multi-exon	FALSE	canonical	3	37	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTGTTTATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	13489877	13498254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13494697
ES.13136.22	chr16	+	6276	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	-4665	0	4662	multi-exon	FALSE	canonical	3	37	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	13489883	13500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13494697
ES.13136.23	chr16	+	2072	1	FSM	ENSMUSG00000022684.16	ENSMUST00000230905.2	2121	1	49	0	16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	13489899	13491971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489900_13492000
ES.13136.24	chr16	+	2080	1	NIC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	2499	1837	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13505593	13507673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13505600_13507700
ES.13136.25	chr16	+	3926	1	NIC	ENSMUSG00000022684.16	novel	3003	8	NA	NA	6860	-852	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAACAAAACAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13516688	13520614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13516700_13520600
ES.13136.26	chr16	+	1157	1	Intergenic	novelGene_11007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	13533551	13534708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13533600_13534700
ES.13136.27	chr16	+	159	1	Intergenic	novelGene_11011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	13557761	13557920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13557800_13557900
ES.13136.28	chr16	+	179	1	Intergenic	novelGene_11012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTAAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	13561525	13561704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13561500_13561700
ES.13136.29	chr16	+	177	1	Intergenic	novelGene_11013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGAAAACCAGAC	NA	False	NA	NA	False	NA	NA	NA	13562810	13562987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13562800_13563000
ES.13136.3	chr16	+	187	2	Intergenic	novelGene_11003	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	13432635	13585702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13432682_13585561
ES.13136.30	chr16	+	132	1	Intergenic	novelGene_11014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13567112	13567244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13567100_13567200
ES.13136.31	chr16	+	2820	1	FSM	ENSMUSG00000118559.3	ENSMUST00000239037.2	3972	1	0	1152	0	-1152	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAGCTTTGAATGCA	NA	False	NA	NA	False	NA	NA	NA	13572429	13575249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13572400_13575200
ES.13136.32	chr16	+	3647	2	Genic_Genomic	ENSMUSG00000118559.3	novel	3972	1	NA	NA	4	-147	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATATAAAATATACCCA	NA	False	NA	NA	False	NA	NA	NA	13572433	13576254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_13573459_13573632
ES.13136.33	chr16	+	4668	2	Genic_Genomic	ENSMUSG00000118559.3	novel	3972	1	NA	NA	33	906	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTAGCCTTTAACAGGA	NA	False	NA	NA	False	NA	NA	NA	13572462	13577307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_13573489_13573665
ES.13136.34	chr16	+	4426	2	Genic_Genomic	ENSMUSG00000118559.3	novel	3972	1	NA	NA	281	908	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGCCTTTAACAGGAGG	NA	False	NA	NA	False	NA	NA	NA	13572710	13577309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_13573474_13573646
ES.13136.35	chr16	+	2294	2	Intergenic	novelGene_11015	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTTTTGAAATAT	NA	False	NA	NA	False	AATAAA	-28	NA	13576814	13580211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13577311_13578413
ES.13136.36	chr16	+	219	1	Intergenic	novelGene_11016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCTCCTCATTCAGAG	NA	False	NA	NA	False	NA	NA	NA	13580882	13581101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13580900_13581100
ES.13136.37	chr16	+	179	1	Intergenic	novelGene_11018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13583322	13583501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13583300_13583500
ES.13136.38	chr16	+	226	1	Intergenic	novelGene_11019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTCCAGC	NA	False	NA	NA	False	NA	NA	NA	13585513	13585739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13585500_13585700
ES.13136.4	chr16	+	173	1	Intergenic	novelGene_11005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTCGT	NA	False	NA	NA	False	NA	NA	NA	13460253	13460426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13460300_13460400
ES.13136.5	chr16	+	2576	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	6	421	6	-411	multi-exon	TRUE	canonical	3	82	junction_1	10.7760126660835	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATTTTGTAAGCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	13489727	13521055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.6	chr16	+	3076	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	-49	-1322	-49	1322	multi-exon	FALSE	canonical	3	37	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATGTATGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	13489743	13497574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13494697
ES.13136.7	chr16	+	1746	2	FSM	ENSMUSG00000079737.5	ENSMUST00000225585.2	1705	2	-47	6	-47	-3	multi-exon	FALSE	canonical	3	37	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGGTACTTTGGTA	NA	False	NA	NA	False	ATTAAA	-29	NA	13489745	13496246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13494697
ES.13136.8	chr16	+	2091	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	30	882	30	-872	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13489751	13520594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13136.9	chr16	+	2973	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	30	0	30	0	multi-exon	FALSE	canonical	3	82	junction_1	10.7760126660835	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13489751	13521476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ES.13137.1	chr16	-	2914	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	-8	0	-8	0	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486042	13355823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.12	chr16	-	2909	24	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	99.5295170474825	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13486001	13355825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470609_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483761_13483846_13485397_13485476_13485874
ES.13137.13	chr16	-	2857	23	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	88.3123331240783	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13486005	13355825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13469636_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.14	chr16	-	1257	3	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	117869	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.5	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13367977	13355825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13367855
ES.13137.15	chr16	-	11007	3	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	118412	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13367434	13355825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13362112_13362249_13363417_13363880
ES.13137.16	chr16	-	2779	23	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	76.039191721677	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCCTTTAACTGT	NA	False	NA	-11	True	ATTAAA	-12	NA	13486019	13355827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482562_13483765_13483846_13485397_13485476_13485874
ES.13137.17	chr16	-	2867	24	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	101.344011641794	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCCTTTAACTGT	NA	False	NA	-11	True	ATTAAA	-12	NA	13486007	13355827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446308_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483767_13483846_13485397_13485476_13485874
ES.13137.19	chr16	-	2850	24	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-60	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	85.2065654170507	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTCTGCCTTTAACTG	NA	False	NA	-12	True	AATAAA	-45	NA	13485906	13355828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470652_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.2	chr16	-	5008	23	NIC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-1	0	intron_retention	FALSE	canonical	1	121	junction_20	53.1555685023678	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486001	13355823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.21	chr16	-	2879	24	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-5	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	86.5351093012364	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTTCCTAGAACT	NA	False	NA	-25	True	AATAAA	-32	NA	13486018	13355841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466275_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.22	chr16	-	2923	25	NNC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	10	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.975651110688	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCTGAAATTAAAGAA	NA	False	NA	-39	True	AATAAA	-18	NA	13486024	13355855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13356767_13358918_13359113_13384433_13384603_13403117_13403177_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.24	chr16	-	193	1	Intergenic	novelGene_10998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCCATCTTTTTCA	NA	False	NA	1	True	AATAAA	-13	NA	13380737	13380544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13380500_13380700
ES.13137.25	chr16	-	176	1	Intergenic	novelGene_11004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	13440733	13440557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13440600_13440700
ES.13137.26	chr16	-	3770	11	NIC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	1	752	intron_retention	FALSE	canonical	1	121	junction_8	74.812031117996	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGCTATTTGTGTAA	NA	False	NA	NA	False	AATAAA	-11	NA	13485999	13464396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13465164_13466282_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.27	chr16	-	1635	12	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	30	108578	-2	747	5prime_fragment	FALSE	canonical	1	121	junction_9	71.4194917487719	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATGCTGGCTATTTG	NA	False	NA	NA	False	AATAAA	-6	NA	13486004	13464401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13137.8	chr16	-	2823	23	NIC	ENSMUSG00000022685.10	novel	2906	24	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	86.1671089288542	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGCCTTTAACTGTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	13486019	13355825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ES.13138.1	chr16	-	260	1	Intergenic	novelGene_11006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGGACTCAAAATCAGCT	NA	False	NA	NA	False	NA	NA	NA	13525059	13524799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13524800_13525100
ES.13139.2	chr16	-	796	3	NIC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	25	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	0	True	AATAAA	-20	NA	13548369	13532920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13533461_13542972_13543080_13548220
ES.13139.3	chr16	-	1362	5	NNC	ENSMUSG00000022683.14	novel	1423	4	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.6852484422014	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	0	True	AATAAA	-20	NA	13548892	13532920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13533461_13542972_13543080_13545826_13545978_13548220_13548288_13548395
ES.13139.4	chr16	-	5548	1	NIC	ENSMUSG00000022683.14	novel	964	4	NA	NA	4701	-4801	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAAGTTGAAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	13543606	13538058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13538100_13543600
ES.13139.5	chr16	-	5351	2	NNC	ENSMUSG00000022683.14	novel	369	3	NA	NA	-55	1033	intron_retention	TRUE	canonical	0	0	junction_1	0	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATATATTTACTATTGT	NA	False	NA	NA	False	GATAAA	-28	NA	13548362	13541981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13543887_13544916
ES.13139.6	chr16	-	177	1	Intergenic	novelGene_11008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTATATATTTAC	NA	False	NA	NA	False	NA	NA	NA	13544031	13543854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13543900_13544000
ES.13139.7	chr16	-	251	1	Intergenic	novelGene_11009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGTATGGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	13545061	13544810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13544800_13545100
ES.1314.1	chr1	+	982	1	ISM	ENSMUSG00000118219.2	ENSMUST00000188175.2	5271	2	13347	3761	13347	-3761	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGTCCTCTGAGATG	NA	False	NA	NA	False	AATAAA	-14	NA	132132541	132133523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132132500_132133500
ES.13140.1	chr16	-	150	1	Intergenic	novelGene_11010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	13554336	13554186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13554200_13554300
ES.13141.1	chr16	-	199	1	Intergenic	novelGene_11017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCTTATCTCAGTAC	NA	False	NA	2	True	NA	NA	NA	13581403	13581204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13581200_13581400
ES.13142.1	chr16	+	180	1	Intergenic	novelGene_11020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGAGTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	13587750	13587930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13587800_13587900
ES.13143.1	chr16	-	171	1	Intergenic	novelGene_11021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13594794	13594623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13594600_13594800
ES.13144.11	chr16	+	4590	19	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	394.33107917079	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598563	13632703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601193_13601355_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13614776_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.12	chr16	+	3417	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	335.154904019889	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598563	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953_13631565_13631642
ES.13144.13	chr16	+	8105	15	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	873	junction_12	94.8598321477644	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGACTACTGTGTTGAA	NA	False	NA	22	True	AATAAA	-15	NA	13598564	13632698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13629474_13630953
ES.13144.14	chr16	+	2980	27	Fusion	ENSMUSG00000022681.16_ENSMUSG00000022682.9	novel	3582	18	NA	NA	-7	-1	multi-exon	FALSE	canonical	0	0	junction_18	249.48927714089	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13598564	13653314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953_13631102_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.15	chr16	+	3586	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	260.167353645907	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598565	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616481_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.17	chr16	+	3133	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-3	452	2	-452	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGAGACAGACAAGTC	NA	False	NA	NA	False	NA	NA	NA	13598573	13632251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.18	chr16	+	3527	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	2	35	junction_2	258.15641455327	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598573	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.19	chr16	+	3578	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	259.956677253043	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598574	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630960
ES.13144.2	chr16	+	3834	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-248	-4	-243	4	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTTGAATTTTAGCCG	NA	False	NA	31	True	AATAAA	-24	NA	13598328	13632707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.21	chr16	+	2978	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	10	-595	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	260.167353645907	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGGTCACAATATTTT	NA	False	NA	NA	False	TTTAAA	-13	NA	13598586	13632108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616474_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.22	chr16	+	2619	15	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	10	4711	10	-4711	5prime_fragment	FALSE	canonical	3	873	junction_12	90.9668306896216	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	13598586	13627992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845
ES.13144.23	chr16	+	2855	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	10	-618	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATTTAAAGGCGAGCAA	NA	False	NA	NA	False	NA	NA	NA	13598586	13632085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.27	chr16	+	3555	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	258.567266184002	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCGTGACTACTGTGT	NA	False	NA	18	True	AATAAA	-11	NA	13598586	13632694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626853_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.29	chr16	+	3578	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	260.153601154725	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598589	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599973_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.3	chr16	+	3568	18	NNC	ENSMUSG00000022682.9	novel	969	2	NA	NA	-218	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	256.266283979181	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598353	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598466_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.30	chr16	+	3539	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	443.759271066464	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCGTGACTACTGTGTT	NA	False	NA	19	True	AATAAA	-12	NA	13598593	13632695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606644_13606732_13606825_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610816_13610911_13613848_13613942_13616475_13616615_13617749_13617873_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.32	chr16	+	3671	19	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	335.167826949757	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCGTGACTACTGTGT	NA	False	NA	18	True	AATAAA	-11	NA	13598598	13632694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626514_13626635_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.33	chr16	+	3721	19	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	334.543160957162	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598599	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601193_13601355_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.36	chr16	+	2938	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	31	-514	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATTCTGTCTATGAA	NA	False	NA	NA	False	NA	NA	NA	13598607	13632189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.37	chr16	+	3560	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	253.348522885852	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598607	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613840_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.39	chr16	+	3580	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	258.299991895371	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598608	13632703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606611_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.4	chr16	+	3651	18	NNC	ENSMUSG00000022682.9	novel	969	2	NA	NA	-196	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.149815636062	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598375	13632705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598570_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.40	chr16	+	3533	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	259.956677253043	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGACTACTGTGTTG	NA	False	NA	20	True	AATAAA	-13	NA	13598609	13632696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629468_13630956
ES.13144.41	chr16	+	3034	12	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	300.371422967527	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598610	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.43	chr16	+	4960	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	-1	intron_retention	FALSE	canonical	3	873	junction_12	90.3648853261044	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598610	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13628521_13629385_13629474_13630953
ES.13144.45	chr16	+	3677	27	Fusion	ENSMUSG00000022681.16_ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	-1	multi-exon	FALSE	canonical	0	0	junction_18	299.75065574791	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13598610	13653314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_13598704_13599856_13599963_13601193_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953_13631102_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.46	chr16	+	3541	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	254.735102250041	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598610	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606829_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.47	chr16	+	5027	17	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	34	1	34	-1	intron_retention	FALSE	canonical	3	873	junction_12	90.8514412378802	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598610	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385
ES.13144.50	chr16	+	2829	26	Fusion	ENSMUSG00000022681.16_ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	0	multi-exon	FALSE	canonical	0	0	junction_18	245.853777680962	1214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13598610	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953_13631102_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.51	chr16	+	3743	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.149815636062	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598610	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599662_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.53	chr16	+	4293	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	34	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	257.733842488746	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598610	13632705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601193_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.56	chr16	+	4378	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	260.167353645907	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTGTTGAATTTTAG	NA	False	NA	28	True	AATAAA	-21	NA	13598615	13632704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13614776_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.57	chr16	+	4568	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	39	1028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	259.956677253043	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTTTTTTAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	13598615	13633731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630956
ES.13144.59	chr16	+	3629	19	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	335.455821271135	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTGTTGAATTTTAGC	NA	False	NA	29	True	AATAAA	-22	NA	13598615	13632705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601193_13601278_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.6	chr16	+	3539	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598520	13632703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.60	chr16	+	3475	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	40	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	267.457706937003	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGACTACTGTGTTG	NA	False	NA	20	True	AATAAA	-13	NA	13598616	13632696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.62	chr16	+	2589	6	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	24058	5	24058	-5	3prime_fragment	FALSE	canonical	3	919	junction_3	74.5745264819026	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGACTACTGTGTTGAA	NA	False	NA	22	True	AATAAA	-15	NA	13622634	13632698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.63	chr16	+	4347	3	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	27428	-7	intron_retention	FALSE	canonical	3	925	junction_2	74.5	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGACTACTGTGTTG	NA	False	NA	20	True	AATAAA	-13	NA	13626004	13632696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13628521_13629385_13629474_13630953
ES.13144.64	chr16	+	1588	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	-416	3	-10	0	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13636698	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.65	chr16	+	1027	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	230.175975270741	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTGTTTAGATGACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	13637089	13653311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.66	chr16	+	940	7	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_3	317.815154173337	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637123	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.67	chr16	+	1083	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	236.912398103181	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637137	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644746_13644850_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.68	chr16	+	1045	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	-31	0	-2	0	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637138	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.7	chr16	+	2461	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	-38	1159	-33	-1159	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTTGTGTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	13598538	13631544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.70	chr16	+	1086	10	NNC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	220.776631434702	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637157	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652587_13652659_13652998
ES.13144.71	chr16	+	1036	10	NNC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	214.455958240128	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGCAATTTGTTTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	13637161	13653304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13644746_13644769_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.72	chr16	+	2280	9	Fusion	ENSMUSG00000022681.16_ENSMUSG00002075895.1	novel	984	9	NA	NA	-1	-6	multi-exon	FALSE	non_canonical	0	0	junction_8	230.620054147509	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAATTTGTTTAGATG	NA	False	NA	NA	False	AATAAA	-14	NA	13637168	13653306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650448_13651865
ES.13144.73	chr16	+	3263	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	118	junction_1	209.129781011989	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13637168	13653314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13652659_13652998
ES.13144.74	chr16	+	3698	8	ISM	ENSMUSG00000022681.16_ENSMUSG00002075895.1	ENSMUST00000115805.3	984	9	-12	-2	7	-1	intron_retention	FALSE	canonical	3	538	junction_1	75.4669815622862	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	13637176	13653314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ES.13144.75	chr16	+	944	8	ISM	ENSMUSG00000022681.16_ENSMUSG00002075895.1	ENSMUST00000115805.3	984	9	-11	2751	8	-5	5prime_fragment	FALSE	canonical	3	538	junction_1	75.4669815622862	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13637177	13650561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ES.13144.76	chr16	+	1054	7	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_3	261.969092748659	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTGTTTAGATGACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	13637177	13653311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644746_13644990_13645251_13645361_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.77	chr16	+	972	9	NNC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	286.721990785499	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637179	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13644746_13644769_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.78	chr16	+	1053	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637179	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.8	chr16	+	3436	16	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	2	2	junction_5	354.439965140627	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598563	13632703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ES.13144.80	chr16	+	944	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	287.768472695587	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637185	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.81	chr16	+	877	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	13	junction_7	292.939639948337	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAATTTGTTTAGATG	NA	False	NA	NA	False	AATAAA	-14	NA	13637186	13653306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652998
ES.13144.82	chr16	+	991	8	NNC	ENSMUSG00000022681.16	novel	773	8	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	352.663104543306	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13637193	13650554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13637791_13637962_13644923_13644990_13645251_13645361_13646868_13646943_13648978_13649036_13649470_13649525_13650200
ES.13144.83	chr16	+	933	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	79	163	5	122	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATCTCCTCTCCAGGG	NA	False	NA	NA	False	AATAAA	-38	NA	13637193	13653152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.84	chr16	+	2127	1	NIC	ENSMUSG00000022681.16	novel	645	2	NA	NA	-9	-5474	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTGGAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	13637198	13639325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637200_13639300
ES.13144.85	chr16	+	1020	7	NIC	ENSMUSG00000022681.16	novel	984	9	NA	NA	-8	19	intron_retention	FALSE	canonical	3	538	junction_1	69.4286204193439	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTAAGTGAGTTTAGGT	NA	False	NA	NA	False	NA	NA	NA	13637199	13650585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644746_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ES.13144.86	chr16	+	898	9	NNC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	233.10241177431	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGCAATTTGTTTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	13637199	13653304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13644746_13644850_13644923_13644961_13646911_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.87	chr16	+	3890	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	-8	2957	intron_retention	FALSE	canonical	3	44	junction_4	287.768472695587	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATACTGTTTGTCTAAGC	NA	False	NA	NA	False	TATAAA	-8	NA	13637199	13656272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ES.13144.88	chr16	+	962	10	NNC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	283.886127405573	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637200	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637301_13644746_13644769_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652587_13652659_13652998
ES.13144.89	chr16	+	1304	8	ISM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	50	0	12	0	intron_retention	FALSE	canonical	3	118	junction_1	208.030806195935	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637219	13653312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544
ES.13144.9	chr16	+	3563	18	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_16	255.572266474677	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTGTGTTGAATTTT	NA	False	NA	26	True	AATAAA	-19	NA	13598563	13632702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629416_13629474_13630953
ES.13144.90	chr16	+	1092	8	NNC	ENSMUSG00000022681.16	novel	984	9	NA	NA	30	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	245.25189050427	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13637237	13650559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13637511_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ES.13144.91	chr16	+	1885	7	ISM	ENSMUSG00000022681.16	ENSMUST00000115805.3	984	9	6518	2727	-1605	19	internal_fragment	FALSE	canonical	3	567	junction_1	59.7032011053195	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTAAGTGAGTTTAGGT	NA	False	NA	NA	False	NA	NA	NA	13643706	13650585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200
ES.13145.1	chr16	+	3327	1	Antisense	novelGene_ENSMUSG00000022680.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTGACTGTTGACAT	NA	False	NA	NA	False	AATAAA	-18	NA	13658734	13662061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_13658700_13662100
ES.13146.1	chr16	+	184	1	Intergenic	novelGene_11028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	13691478	13691662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13691500_13691700
ES.13147.1	chr16	+	2054	4	FSM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	2	1033	2	4	multi-exon	FALSE	canonical	2	10	junction_1	87.8179936004006	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGTATTGTCATTTT	NA	False	NA	13	True	NA	NA	NA	13721026	13766450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13721145_13762529_13762601_13764421_13764452_13764615
ES.13147.10	chr16	+	1133	4	NNC	ENSMUSG00000022679.14	novel	2155	4	NA	NA	5	454	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	90.1714416480567	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAATGAAAATTCTAGAAA	475	False	NA	NA	False	AATAAA	-26	NA	13758512	13765614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758546_13762529_13762601_13764421_13764452_13764615
ES.13147.11	chr16	+	3150	5	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	5	33	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	80.7635437558308	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	475	False	NA	NA	False	NA	NA	NA	13758512	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615_13767023_13767249
ES.13147.12	chr16	+	1222	5	FSM	ENSMUSG00000022679.14	ENSMUST00000124947.8	768	5	15	-469	-6	469	multi-exon	FALSE	canonical	1	2	junction_1	88.2439799646412	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACGAATCATTTCTTT	485	False	NA	NA	False	AATAAA	-41	NA	13758522	13765629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758576_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13147.13	chr16	+	3012	4	FSM	ENSMUSG00000022679.14	ENSMUST00000141971.8	2155	4	32	-889	-3	-7	multi-exon	FALSE	canonical	2	14	junction_1	85.9353762363841	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	488	False	NA	NA	False	NA	NA	NA	13758525	13767476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758576_13762529_13762601_13764421_13764452_13764615
ES.13147.14	chr16	+	960	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-31	-349	6	-68	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTCCAGTTTA	497	False	NA	NA	False	AATATA	-16	NA	13758534	13765092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
ES.13147.15	chr16	+	1459	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	7	1621	7	461	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTAGAAAACGAATC	498	False	NA	NA	False	AATAAA	-33	NA	13758535	13765621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.17	chr16	+	3358	5	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	13	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.8079665970696	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGATTTGTCCTTG	504	False	NA	NA	False	AAAAAG	-40	NA	13758541	13766564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13759983_13760038_13762529_13762601_13763513_13764452_13764615
ES.13147.18	chr16	+	1141	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	15	1931	15	151	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAGGAGTAGTGTTG	506	False	NA	NA	False	ATTAAA	-27	NA	13758543	13765311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.19	chr16	+	2276	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	17	794	-13	2	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTGGGTATTGTCATT	508	False	NA	11	True	NA	NA	NA	13758545	13766448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.2	chr16	+	2840	4	FSM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	8	241	8	0	multi-exon	FALSE	canonical	2	10	junction_1	87.8179936004006	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	13721032	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13721145_13762529_13762601_13764421_13764452_13764615
ES.13147.20	chr16	+	4226	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	-10	-1901	-10	864	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCTGGTGAAATGCTT	511	False	NA	NA	False	NA	NA	NA	13758548	13768347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13147.21	chr16	+	3016	5	NNC	ENSMUSG00000022679.14	novel	580	4	NA	NA	-10	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.9529233963457	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCAGGCGGATTTCTG	511	False	NA	NA	False	NA	NA	NA	13758548	13767389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615_13767023_13767249
ES.13147.22	chr16	+	2778	5	FSM	ENSMUSG00000022679.14	ENSMUST00000124947.8	768	5	41	-2051	-10	-31	multi-exon	FALSE	canonical	1	2	junction_1	88.2439799646412	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATATATTTAAAAAAAAAA	511	False	NA	NA	False	NA	NA	NA	13758548	13767211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758576_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13147.23	chr16	+	3950	5	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	-10	869	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	80.7635437558308	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGAAATGCTTTCCTT	511	False	NA	NA	False	NA	NA	NA	13758548	13768352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615_13767023_13767249
ES.13147.24	chr16	+	4130	4	NIC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	0	-6	intron_retention	FALSE	canonical	3	36	junction_1	71.2242156073964	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGCAGGATTTGGGTA	521	False	NA	3	True	NA	NA	NA	13758558	13766440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13758888_13759983_13760038_13762529_13764452_13764615
ES.13147.25	chr16	+	3331	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	30	-274	0	33	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	521	False	NA	NA	False	NA	NA	NA	13758558	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.26	chr16	+	2432	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	31	624	1	31	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGACTTTTTGTATAA	522	False	NA	NA	False	NA	NA	NA	13758559	13766618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.27	chr16	+	3381	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	1	-1067	1	30	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGGTCATGGT	522	False	NA	NA	False	NA	NA	NA	13758559	13767513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13147.28	chr16	+	3157	6	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	1	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.5978723136699	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	522	False	NA	NA	False	NA	NA	NA	13758559	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615_13767023_13767249
ES.13147.29	chr16	+	3001	4	NNC	ENSMUSG00000022679.14	novel	3087	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	90.1714416480567	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	522	False	NA	NA	False	NA	NA	NA	13758559	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758833_13762529_13762601_13764421_13764452_13764615
ES.13147.3	chr16	+	2862	4	NIC	ENSMUSG00000022679.14	novel	3089	4	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	83.2519602705479	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	13721039	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13721145_13762529_13762601_13764392_13764452_13764615
ES.13147.30	chr16	+	3267	4	NNC	ENSMUSG00000022679.14	novel	3087	4	NA	NA	1	33	intron_retention	FALSE	non_canonical	0	0	junction_3	86.1677949635993	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	522	False	NA	NA	False	NA	NA	NA	13758559	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764421_13767023_13767249
ES.13147.31	chr16	+	2151	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	32	904	2	-108	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAAGAGTCTAAGTT	523	False	NA	-99	True	TATAAA	-13	NA	13758560	13766338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.32	chr16	+	3126	5	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.6901811048979	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	523	False	NA	NA	False	NA	NA	NA	13758560	13767476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764357_13764452_13764615_13767023_13767249
ES.13147.33	chr16	+	2214	4	NNC	ENSMUSG00000022679.14	novel	3087	4	NA	NA	3	-108	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	81.939001702486	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAAGAGTCTAAGTT	524	False	NA	-99	True	TATAAA	-13	NA	13758561	13766338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764357_13764452_13764615
ES.13147.34	chr16	+	3179	5	NNC	ENSMUSG00000022679.14	novel	580	4	NA	NA	-1	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.9529233963457	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTGAGGATCTGACAA	527	False	NA	NA	False	NA	NA	NA	13758564	13767568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615_13767023_13767249
ES.13147.35	chr16	+	2972	5	NNC	ENSMUSG00000022679.14	novel	2315	5	NA	NA	-1	-94	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	80.7635437558308	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCAGGCGGATTTCTG	527	False	NA	NA	False	NA	NA	NA	13758564	13767389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615_13767024_13767249
ES.13147.36	chr16	+	1466	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	6	843	-1	443	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATTACAGCAAATGAA	527	False	NA	NA	False	AATAAA	-15	NA	13758564	13765603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13147.37	chr16	+	3419	2	ISM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-1	-882	-1	465	intron_retention	FALSE	canonical	3	154	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGAAAACGAATCATTT	527	False	NA	NA	False	AATAAA	-37	NA	13758564	13765625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13758888_13762529
ES.13147.38	chr16	+	3042	3	NNC	ENSMUSG00000022679.14	novel	3087	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	527	False	NA	NA	False	NA	NA	NA	13758564	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758888_13762529_13762601_13764594
ES.13147.39	chr16	+	3315	4	FSM	ENSMUSG00000022679.14	ENSMUST00000156143.2	389	4	-393	-2533	-1	0	multi-exon	FALSE	canonical	1	2	junction_1	91.5835987257301	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	527	False	NA	NA	False	NA	NA	NA	13758564	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13759152_13762529_13762601_13764421_13764452_13764615
ES.13147.4	chr16	+	3106	4	FSM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	16	-33	16	33	multi-exon	FALSE	canonical	2	10	junction_1	87.8179936004006	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	13721040	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13721145_13762529_13762601_13764421_13764452_13764615
ES.13147.40	chr16	+	4158	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	36	-1107	-1	866	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGGTGAAATGCTTTC	527	False	NA	NA	False	NA	NA	NA	13758564	13768349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.41	chr16	+	3080	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	-1	-2499	-1	0	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	527	False	NA	NA	False	NA	NA	NA	13758564	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
ES.13147.42	chr16	+	2180	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	0	-1600	0	-103	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAGTCTAAGTTATGGA	528	False	NA	-94	True	TATAAA	-18	NA	13758565	13766343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
ES.13147.43	chr16	+	3050	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	37	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	528	False	NA	NA	False	NA	NA	NA	13758565	13767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.44	chr16	+	1558	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	41	1488	4	594	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGCTTTGTGTGTAT	532	False	NA	NA	False	NA	NA	NA	13758569	13765754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ES.13147.46	chr16	+	4235	2	NNC	ENSMUSG00000022679.14	novel	3089	4	NA	NA	7600	3536	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCGT	8520	False	NA	NA	False	NA	NA	NA	13766557	13771019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13767023_13767249
ES.13147.5	chr16	+	3247	4	NNC	ENSMUSG00000022679.14	novel	3089	4	NA	NA	-10406	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.5250716772967	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	13748087	13767516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13748333_13762529_13762601_13764421_13764452_13764615
ES.13147.6	chr16	+	1338	4	NNC	ENSMUSG00000022679.14	novel	3089	4	NA	NA	-10406	447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.5250716772967	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACAGCAAATGAAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	13748087	13765607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13748333_13762529_13762601_13764421_13764452_13764615
ES.13147.7	chr16	+	2970	4	NNC	ENSMUSG00000022679.14	novel	3089	4	NA	NA	-10406	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.5250716772967	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCAGAACTCTCAGC	NA	False	NA	NA	False	NA	NA	NA	13748087	13767239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13748333_13762529_13762601_13764421_13764452_13764615
ES.13147.8	chr16	+	3217	5	NNC	ENSMUSG00000022679.14	novel	768	5	NA	NA	-19	29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.5608631978783	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTTGGTCATGG	437	False	NA	NA	False	NA	NA	NA	13758474	13767512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13758576_13759983_13760038_13762529_13762601_13764357_13764452_13764615
ES.13147.9	chr16	+	2049	5	FSM	ENSMUSG00000022679.14	ENSMUST00000124947.8	768	5	5	-1286	5	0	multi-exon	FALSE	canonical	1	2	junction_1	88.2439799646412	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGATTTGGGTATTGTCA	475	False	NA	9	True	NA	NA	NA	13758512	13766446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13758576_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ES.13148.1	chr16	-	3492	1	Intergenic	novelGene_11022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGGGGTTGGACTGG	NA	False	NA	NA	False	AATAAA	-35	NA	13598511	13595019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13595000_13598500
ES.13148.2	chr16	-	1753	1	Intergenic	novelGene_11023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACCAGGCCAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	13598556	13596803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13596800_13598600
ES.13149.1	chr16	-	2255	1	Antisense	novelGene_ENSMUSG00000022682.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTACTGGGGATTCATTC	4604	False	NA	NA	False	TTTAAA	-28	NA	13607146	13604891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_13604900_13607100
ES.1315.1	chr1	+	1752	1	ISM	ENSMUSG00000118219.2	ENSMUST00000188175.2	5271	2	16336	2	16336	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTGCAGCAAGTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	132135530	132137282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132135500_132137300
ES.13150.1	chr16	-	7023	2	Antisense	novelGene_ENSMUSG00000022682.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAGAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13628424	13621353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_13626124_13626171
ES.13151.1	chr16	-	4189	1	Antisense	novelGene_ENSMUSG00000022682.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTCCTGGCTGAGTCC	NA	False	NA	NA	False	NA	NA	NA	13635978	13631789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_13631800_13636000
ES.13152.1	chr16	-	3146	2	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	3007	7028	intron_retention	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAATGACCAGTCTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	13651938	13643983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13647111_13651919
ES.13152.10	chr16	-	4113	4	ISM	ENSMUSG00000022680.15	ENSMUST00000144913.2	669	6	756	-3386	-240	8	3prime_fragment	FALSE	canonical	3	198	junction_3	22.2161102706022	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	13657440	13651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13655012_13655959_13656057_13656165_13656259_13657095
ES.13152.11	chr16	-	4502	16	ISM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	33101	-2019	6266	5	3prime_fragment	FALSE	canonical	3	195	junction_15	13.6463263269725	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTCTCTGAACAT	NA	False	NA	NA	False	ATTAAA	-14	NA	13687745	13651436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666
ES.13152.14	chr16	-	3745	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-280	763	-276	244	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCACCACCATACCTCC	9738	False	NA	NA	False	NA	NA	NA	13721271	13651774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.16	chr16	-	4760	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-139	-1443	6	6	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTTTGTCTGTCTT	9994	False	NA	-6	True	NA	NA	NA	13720985	13652012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.17	chr16	-	3486	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-260	1002	-256	5	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGCTGTTTGTCTGTCT	9758	False	NA	-7	True	NA	NA	NA	13721251	13652013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.2	chr16	-	4188	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	23	-14	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_22	39.8562160573743	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTACATTGTAAATTC	9721	False	NA	NA	False	NA	NA	NA	13720968	13651025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
ES.13152.20	chr16	-	3116	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_2	47.4295816700011	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTGCTGTTTGTC	9743	False	NA	-12	True	NA	NA	NA	13720946	13652018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13652711_13654249_13654480_13654966_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.21	chr16	-	2957	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-73	-4	33	-1	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTGTTGCTGTTTGT	9731	False	NA	-13	True	NA	NA	NA	13720958	13652019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.22	chr16	-	3047	22	NIC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	51.2585814949141	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTTTGTTGCTGTTT	10008	False	NA	-15	True	NA	NA	NA	13720971	13652021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.23	chr16	-	3143	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49.877884905502	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGCTTTTGTTGCTG	9788	False	NA	-18	True	NA	NA	NA	13720901	13652024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13652711_13654249_13654498_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.26	chr16	-	2815	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	15	1398	15	-270	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTCCCTGTGCACTG	10003	False	NA	NA	False	NA	NA	NA	13720976	13652409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.27	chr16	-	2689	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	5	-272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49.877884905502	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGCTTCCCTGTGCAC	9855	False	NA	NA	False	NA	NA	NA	13720834	13652411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13652711_13654249_13654498_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.28	chr16	-	3061	21	NIC	ENSMUSG00000022680.15	novel	3178	23	NA	NA	3	107	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	48.4316786824492	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGTGTGCACTGTGCT	9991	False	NA	NA	False	TTTAAA	-24	NA	13720988	13653563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.29	chr16	-	3172	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-109	115	-36	100	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGCCCAGTGTGCA	9734	False	NA	NA	False	TTTAAA	-17	NA	13720955	13653570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.3	chr16	-	3928	6	ISM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	63288	-2429	-358	-15	3prime_fragment	FALSE	canonical	3	198	junction_4	17.7718879132184	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTGTACATTGTAAATT	NA	False	NA	NA	False	NA	NA	NA	13657558	13651026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500
ES.13152.30	chr16	-	2784	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-44	438	-5	-223	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTGATGAAGCTGCATA	9799	False	NA	NA	False	NA	NA	NA	13720890	13653893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.31	chr16	-	2680	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-152	650	-3	-435	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGGAGTTTTGCACAG	9981	False	NA	NA	False	GATAAA	-20	NA	13720998	13654105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.32	chr16	-	3412	16	ISM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	-47	6260	-8	-4219	5prime_fragment	FALSE	canonical	3	195	junction_8	11.4534807906689	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGACTTAAAACA	9796	False	NA	NA	False	NA	NA	NA	13720893	13659715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.33	chr16	-	2139	1	Intergenic	novelGene_11024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	504	False	NA	NA	False	NA	NA	NA	13672134	13669995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13670000_13672100
ES.13152.34	chr16	-	1226	11	ISM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	27	9486	23	802	5prime_fragment	FALSE	canonical	3	195	junction_3	12.7342059037853	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTGCCTTTCTTAA	9721	False	NA	NA	False	AATAAA	-24	NA	13720968	13676626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.35	chr16	-	2417	1	Intergenic	novelGene_11025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13682163	13679746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13679700_13682200
ES.13152.36	chr16	-	2207	9	NNC	ENSMUSG00000022680.15	novel	2466	14	NA	NA	-6	7390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	97.318982603601	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCAAATGTACTAGAGCA	9798	False	NA	NA	False	NA	NA	NA	13720891	13686451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13712922_13713096_13720778
ES.13152.37	chr16	-	4691	7	NIC	ENSMUSG00000022680.15	novel	2466	14	NA	NA	16	7390	intron_retention	FALSE	canonical	3	210	junction_1	11.0403301077861	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCAAATGTACTAGAGCA	10004	False	NA	NA	False	NA	NA	NA	13720975	13686451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.39	chr16	-	1837	7	NIC	ENSMUSG00000022680.15	novel	2466	14	NA	NA	4	7359	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.6459118827176	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9774	False	NA	NA	False	NA	NA	NA	13720915	13686482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13687746_13690318_13690388_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.4	chr16	-	5374	16	NIC	ENSMUSG00000022680.15	novel	3178	23	NA	NA	3658	-15	combination_of_known_junctions	FALSE	canonical	3	195	junction_14	13.5048962314496	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTGTACATTGTAAATT	NA	False	NA	NA	False	NA	NA	NA	13690353	13651026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318
ES.13152.40	chr16	-	1501	8	NNC	ENSMUSG00000022680.15	novel	2466	14	NA	NA	-3	6753	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_6	58.001055585046	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTACAATGTCTTTTAT	9981	False	NA	NA	False	AATAAA	-17	NA	13720998	13687088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
ES.13152.41	chr16	-	177	1	Intergenic	novelGene_11026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAACCTTAGGGTC	NA	False	NA	NA	False	NA	NA	NA	13688239	13688062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13688100_13688200
ES.13152.42	chr16	-	178	1	Intergenic	novelGene_11027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGGCAGGG	NA	False	NA	NA	False	NA	NA	NA	13689626	13689448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13689400_13689600
ES.13152.43	chr16	-	3998	2	FSM	ENSMUSG00000022680.15	ENSMUST00000137715.2	683	2	-111	-3204	-36	-2341	multi-exon	FALSE	canonical	3	225	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGGAAGAAAGAAAGG	9734	False	NA	NA	False	NA	NA	NA	13720955	13701813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13705635_13720778
ES.13152.44	chr16	-	5267	1	NIC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	15	-10692	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGGAGGAGGAAG	10003	False	NA	NA	False	NA	NA	NA	13720976	13715709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13715700_13721000
ES.13152.45	chr16	-	2145	1	NIC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-8	-13731	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGGCTCTTATTTTTAT	9796	False	NA	NA	False	NA	NA	NA	13720893	13718748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13718700_13720900
ES.13152.5	chr16	-	3884	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-7	-997	-7	-15	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTGTACATTGTAAATT	9797	False	NA	NA	False	NA	NA	NA	13720892	13651026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.6	chr16	-	3875	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-69	422	-65	8	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	9949	False	NA	NA	False	ATTAAA	-17	NA	13721060	13651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.7	chr16	-	3582	23	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-11594	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.7808653036923	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	13705605	13651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13652711_13654249_13654498_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560
ES.13152.8	chr16	-	3657	24	NIC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	-15	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.2948142869984	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	9789	False	NA	NA	False	ATTAAA	-17	NA	13720900	13651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13652653_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13152.9	chr16	-	3553	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	-83	-590	23	8	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCTGAACATTTT	9721	False	NA	NA	False	ATTAAA	-17	NA	13720968	13651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ES.13153.1	chr16	-	188	1	FSM	ENSMUSG00000089818.2	ENSMUST00000162902.2	1973	1	1604	181	1604	-181	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTTCCGAGTGGACA	1553	False	NA	0	True	NA	NA	NA	13737659	13737471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13737500_13737700
ES.13154.1	chr16	-	222	1	Intergenic	novelGene_11029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTTGGGAGG	5619	False	NA	NA	False	NA	NA	NA	13775027	13774805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13774800_13775000
ES.13155.1	chr16	-	1365	1	Intergenic	novelGene_11030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAAATTGTCATGGCT	NA	False	NA	NA	False	NA	NA	NA	13795669	13794304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13794300_13795700
ES.13156.1	chr16	+	2267	7	NNC	ENSMUSG00000044117.13	novel	2394	6	NA	NA	-185	-211	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.9098594500829	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTGCTTAGTACTCCA	NA	False	NA	10	True	NA	NA	NA	13804282	13919153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13804326_13804426_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ES.13156.10	chr16	+	183	1	Intergenic	novelGene_11034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCTAAAGCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	13899624	13899807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13899600_13899800
ES.13156.11	chr16	+	2570	1	NIC	ENSMUSG00000044117.13	novel	2394	6	NA	NA	107494	750	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCACCTAGTTAAATTT	8850	False	NA	NA	False	NA	NA	NA	13912031	13914601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13912000_13914600
ES.13156.2	chr16	+	1749	5	FSM	ENSMUSG00000044117.13	ENSMUST00000118412.8	954	5	-49	-746	4	-526	multi-exon	TRUE	canonical	0	0	junction_3	22.3886131772381	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATGAAAAACAC	NA	False	NA	-17	True	NA	NA	NA	13804471	13918838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13913767_13913851_13917656
ES.13156.3	chr16	+	1833	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	35	526	-18	-526	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATGAAAAACAC	NA	False	NA	-17	True	NA	NA	NA	13804502	13918838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ES.13156.4	chr16	+	3748	5	NIC	ENSMUSG00000044117.13	novel	2394	6	NA	NA	-12	-505	intron_retention	FALSE	canonical	3	47	junction_1	4.26468052730799	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATCTTATATGTTCT	NA	False	NA	4	True	AATAAA	-14	NA	13804508	13918859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13913851_13917656
ES.13156.5	chr16	+	1951	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	43	400	-10	-400	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTCCTTGTGACCTCT	NA	False	NA	NA	False	TATAAA	-16	NA	13804510	13918964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ES.13156.6	chr16	+	1624	4	NIC	ENSMUSG00000044117.13	novel	954	5	NA	NA	-7	-526	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	23.5088635766739	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATGAAAAACAC	NA	False	NA	-17	True	NA	NA	NA	13804513	13918838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13804758_13867246_13867371_13906809_13906884_13917656
ES.13156.8	chr16	+	5596	1	Intergenic	novelGene_11032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	13857855	13863451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13857900_13863500
ES.13156.9	chr16	+	5510	1	Intergenic	novelGene_11033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGGAAGGAAA	NA	False	NA	NA	False	AATAAA	-40	NA	13889421	13894931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13889400_13894900
ES.13157.1	chr16	-	3011	1	FSM	ENSMUSG00000065968.9	ENSMUST00000178021.2	1823	1	-88	-1100	-88	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATTGTCGTGGCTTCA	NA	False	NA	NA	False	NA	NA	NA	13802573	13799562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13799600_13802600
ES.13157.2	chr16	-	946	3	FSM	ENSMUSG00000065968.9	ENSMUST00000117803.2	853	3	-91	-2	-58	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTGTCGTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	13804810	13799563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13799857_13801353_13801690_13804493
ES.13158.1	chr16	-	188	1	Intergenic	novelGene_11031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	13808980	13808792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13808800_13809000
ES.13159.1	chr16	-	166	1	Intergenic	novelGene_11035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAT	NA	False	NA	NA	False	NA	NA	NA	13915632	13915466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13915500_13915600
ES.1316.1	chr1	-	173	1	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTTTAAGCAAACA	NA	False	NA	NA	False	NA	NA	NA	132164192	132164019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132164000_132164200
ES.13160.1	chr16	+	1937	1	Antisense	novelGene_ENSMUSG00000060657.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	13953966	13955903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_13954000_13955900
ES.13161.1	chr16	+	180	1	Intergenic	novelGene_11038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAATTAAATAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	13972516	13972696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13972500_13972700
ES.13162.1	chr16	-	7698	27	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	18	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	10.9054570781256	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTTTTGTTTGTGGG	9834	False	NA	1	True	AATAAA	-23	NA	13977113	13927029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959548_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.11	chr16	-	6884	26	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	83	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.9303364225375	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTGTAATGAGTGCT	9899	False	NA	-11	True	AATAAA	-11	NA	13977048	13927041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959548_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13970426_13970577_13977007
ES.13162.13	chr16	-	2955	17	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	-4	-2124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	11.8991530686011	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAAAGAACTCTTCC	9812	False	NA	NA	False	GATAAA	-26	NA	13977135	13929160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956238_13977022
ES.13162.14	chr16	-	5566	27	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	18	-2126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	10.9054570781256	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATTTGAAAGAACTCTT	9834	False	NA	NA	False	GATAAA	-24	NA	13977113	13929162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959547_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.15	chr16	-	5600	27	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	17	-2138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.2337324857827	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTCTCCCACTTATTT	9833	False	NA	NA	False	GATAAA	-12	NA	13977114	13929174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944915_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.16	chr16	-	5454	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	-2	2299	-2	-2299	multi-exon	FALSE	canonical	2	10	junction_23	10.0957692234429	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCTTAAAAACCT	9814	False	NA	NA	False	ATTAAA	-35	NA	13977133	13929335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.17	chr16	-	268	1	Intergenic	novelGene_11036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTTACTCTCACTTA	NA	False	NA	NA	False	NA	NA	NA	13949790	13949522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13949500_13949800
ES.13162.18	chr16	-	2241	10	NIC	ENSMUSG00000060657.9	novel	2782	11	NA	NA	15	-330	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	7.55882282297553	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTCTTTGTGTGTGTGT	9831	False	NA	NA	False	NA	NA	NA	13977116	13959160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13970426_13970577_13971695_13971896_13977007
ES.13162.19	chr16	-	2770	10	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	15	32132	15	-338	5prime_fragment	FALSE	canonical	3	10	junction_6	4.47213595499958	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATCTTACACTCTTTGT	9831	False	NA	NA	False	NA	NA	NA	13977116	13959168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.2	chr16	-	3458	6	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	14009	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13.6029408585056	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGCTTTTGTTTGTG	NA	False	NA	-1	True	AATAAA	-21	NA	13946395	13927031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13929636_13932046_13932218_13938087_13938319_13943805_13944034_13944919_13945123_13946374
ES.13162.21	chr16	-	3234	7	ISM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	83	35131	83	-3337	5prime_fragment	FALSE	canonical	3	10	junction_3	5.22812904711937	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGAGTCTTGTTTTTAC	9899	False	NA	NA	False	NA	NA	NA	13977048	13962167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.22	chr16	-	277	1	Intergenic	novelGene_11037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCATAGAACTATATATG	NA	False	NA	NA	False	AATAAA	-24	NA	13965890	13965613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_13965600_13965900
ES.13162.23	chr16	-	3778	1	Genic_Genomic	ENSMUSG00000060657.9	novel	NA	NA	NA	NA	-12	-14535	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAC	9804	False	NA	NA	False	NA	NA	NA	13977143	13973365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_13973400_13977100
ES.13162.3	chr16	-	7558	26	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	10.9891582935182	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGAGTGCTTTTGTTT	9821	False	NA	-4	True	AATAAA	-18	NA	13977126	13927034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.4	chr16	-	7757	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	-6	0	-6	0	multi-exon	FALSE	canonical	2	10	junction_23	10.0957692234429	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	9810	False	NA	-6	True	AATAAA	-16	NA	13977137	13927036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ES.13162.5	chr16	-	5165	17	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	4114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.114877048604	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	NA	False	NA	-6	True	AATAAA	-16	NA	13956290	13927036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13934453_13934600_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206
ES.13162.6	chr16	-	5755	20	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	11.2178132976109	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	NA	False	NA	-6	True	AATAAA	-16	NA	13960292	13927036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958174_13959506_13959666_13959751_13959910_13960095
ES.13162.7	chr16	-	6835	18	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	550	-1	intron_retention	FALSE	canonical	2	17	junction_16	9.71888611955322	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTAATGAGTGCTTTTG	NA	False	NA	-7	True	AATAAA	-15	NA	13959854	13927037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13959666_13959751
ES.13162.8	chr16	-	7205	27	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	11.1113913508381	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTAATGAGTGCTTTTG	9824	False	NA	-7	True	AATAAA	-15	NA	13977123	13927037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13970426_13970577_13971695_13971896_13977007
ES.13162.9	chr16	-	6098	21	NNC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	-1988	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.6154666976692	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTAATGAGTGCTTTTG	NA	False	NA	-7	True	AATAAA	-15	NA	13962392	13927037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959548_13959666_13959751_13959910_13960095_13960522_13962298
ES.13163.1	chr16	+	1512	1	FSM	ENSMUSG00000070074.3	ENSMUST00000093566.3	67	1	-30	-1415	-30	1415	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTCCTTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	13977459	13978971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13977500_13979000
ES.13163.2	chr16	+	1923	1	FSM	ENSMUSG00000070074.3	ENSMUST00000093566.3	67	1	-29	-1827	-29	1827	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	13977460	13979383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13977500_13979400
ES.13164.1	chr16	+	3858	8	ISM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	-86	0	-86	0	intron_retention	FALSE	canonical	3	242	junction_7	27.7378397699251	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981052	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
ES.13164.10	chr16	+	2596	10	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	118.319508842961	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981160	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13992631_13992963_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.11	chr16	+	1982	3	FSM	ENSMUSG00000022678.17	ENSMUST00000133249.8	681	3	-7	-1294	-1	1294	multi-exon	FALSE	canonical	3	293	junction_1	20.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTGTAACTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	13981160	13989987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201
ES.13164.13	chr16	+	2366	10	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	119.869373347268	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981164	14010782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_13995201_13995317_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.14	chr16	+	2108	8	NIC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	3	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	106.296082443603	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTTTTGTGCAT	NA	False	NA	89	True	AATAAA	-11	NA	13981164	14010785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14009581
ES.13164.15	chr16	+	5080	8	NNC	ENSMUSG00000022678.17	novel	2335	9	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_7	106.296082443603	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981165	14010782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14007570_14007906
ES.13164.16	chr16	+	2104	8	FSM	ENSMUSG00000022678.17	ENSMUST00000132316.8	2105	8	4	-3	-2	3	multi-exon	FALSE	canonical	3	4	junction_3	103.03773828168	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTTTTGTGCAT	NA	False	NA	89	True	AATAAA	-11	NA	13981165	14010785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.18	chr16	+	3015	10	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	119.329401962968	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981165	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13992207_13992963_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.19	chr16	+	1598	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	30	659	1	-559	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGTCTGCCTCTTAAG	NA	False	NA	NA	False	ATTAAA	-27	NA	13981168	14010133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.2	chr16	+	2282	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	5	0	5	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981143	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.20	chr16	+	3593	7	ISM	ENSMUSG00000022678.17	ENSMUST00000132316.8	2105	8	7	-10	1	0	intron_retention	FALSE	canonical	3	4	junction_3	111.281425024824	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981168	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_14001339_14001477_14003557_14003738_14006176_14006269_14007950
ES.13164.22	chr16	+	2250	10	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	-19	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.288365940691	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGATGTGCGTCCTTTCA	NA	False	NA	13	True	AATAAA	-26	NA	13981189	14010709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14000127_14000225_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.23	chr16	+	3590	8	ISM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	52	18	-6	-18	intron_retention	FALSE	canonical	3	242	junction_7	27.7378397699251	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATAAAATAAAACCAA	NA	False	NA	-22	True	NA	NA	NA	13981202	14010674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
ES.13164.24	chr16	+	2831	10	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.736748280922	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981209	14010792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13992347_13992963_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.25	chr16	+	1584	9	FSM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	60	-93	2	3	multi-exon	FALSE	canonical	3	9	junction_8	96.6681662958391	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTTTTGTGCAT	NA	False	NA	89	True	AATAAA	-11	NA	13981210	14010785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14010205
ES.13164.26	chr16	+	338	1	Intergenic	novelGene_11039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13984676	13985014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13984700_13985000
ES.13164.27	chr16	+	175	1	Intergenic	novelGene_11040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGTGACGAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	13984683	13984858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_13984700_13984900
ES.13164.28	chr16	+	4014	7	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	6106	-345	-5676	335	intron_retention	FALSE	canonical	3	242	junction_6	29.9411459737636	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACAGAGATTGATGTTT	684	False	NA	NA	False	NA	NA	NA	13987314	14011127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950
ES.13164.29	chr16	+	4040	7	NNC	ENSMUSG00000022678.17	novel	746	4	NA	NA	-223	333	intron_retention	FALSE	canonical	0	0	junction_1	138.795312921182	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCACAGAGATTGATGT	6137	False	NA	NA	False	NA	NA	NA	13992767	14011125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_13992963_13993157_13993304_13995201_13995317_14001339_14001477_14003557_14003738_14006176_14006269_14007950
ES.13164.30	chr16	+	1649	5	ISM	ENSMUSG00000022678.17	ENSMUST00000132316.8	2105	8	20177	108	-98	-18	3prime_fragment	FALSE	canonical	3	240	junction_4	30.6869271840632	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATAAAATAAAACCAA	NA	False	NA	-22	True	NA	NA	NA	14001338	14010674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ES.13164.7	chr16	+	2383	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	-48	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981160	14010782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ES.13164.9	chr16	+	1523	9	FSM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	10	18	-1	-18	multi-exon	FALSE	canonical	3	9	junction_8	96.6681662958391	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATAAAATAAAACCAA	NA	False	NA	-22	True	NA	NA	NA	13981160	14010674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14010205
ES.13165.1	chr16	-	6088	6	Antisense	novelGene_ENSMUSG00000022678.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAATATTTGGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	14009899	13990098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_13995315_14001335_14001475_14003555_14003737_14006175_14006268_14007949_14008096_14009585
ES.13166.1	chr16	-	183	1	Intergenic	novelGene_11041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTTTTTAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	14021697	14021514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_14021500_14021700
ES.13167.1	chr16	-	96	1	Intergenic	novelGene_11042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	14093563	14093467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_14093500_14093600
ES.13168.1	chr16	+	1206	1	Antisense	novelGene_ENSMUSG00000022677.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-44	NA	14122056	14123262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_14122100_14123300
ES.13169.1	chr16	+	1411	1	Intergenic	novelGene_11043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	14127041	14128452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_14127000_14128500
ES.1317.1	chr1	-	176	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGAGAGAATT	NA	False	NA	NA	False	NA	NA	NA	132170075	132169899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132169900_132170100
ES.13170.1	chr16	-	1985	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-19	-819	12	815	multi-exon	FALSE	canonical	3	67	junction_2	185.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGCTTTATGCATTC	NA	False	NA	-6	True	ATTAAA	-16	NA	14135227	14116292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122452_14135157
ES.13170.10	chr16	-	1185	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	-38	0	-7	0	multi-exon	FALSE	canonical	3	67	junction_2	185.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135246	14117111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122452_14135157
ES.13170.11	chr16	-	1364	5	NNC	ENSMUSG00000022677.16	novel	1414	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	158.497634051742	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135189	14117111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_14118074_14122317_14122405_14128910_14128996_14131679_14131878_14135157
ES.13170.12	chr16	-	1222	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	177.216126680264	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135198	14117111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_14118074_14122317_14122452_14128910_14128996_14135157
ES.13170.13	chr16	-	1203	4	NNC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	201.124063425759	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135226	14117111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_14118074_14122317_14122405_14128910_14128996_14135157
ES.13170.14	chr16	-	1058	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	26	381	-2	-183	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAAGTTTGATTTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	14135213	14117488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ES.13170.15	chr16	-	817	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	-4	652	-4	-454	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTTTTTAGTACTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	14135243	14117759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ES.13170.2	chr16	-	1681	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	13	427	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	177.216126680264	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAAAAGTCTGGGCTG	NA	False	NA	NA	False	AGTAAA	-24	NA	14135226	14116680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_14118074_14122317_14122452_14128910_14128996_14135157
ES.13170.3	chr16	-	1471	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	-3	-3	-3	3	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTCATGGTCTGTC	NA	False	NA	-1	True	NA	NA	NA	14135242	14117104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ES.13170.4	chr16	-	4176	3	NNC	ENSMUSG00000022677.16	novel	1147	3	NA	NA	9381	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	219	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTATGGTCATGGTC	NA	False	NA	-5	True	NA	NA	NA	14125815	14117108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_14118074_14122317_14122995_14123281
ES.13170.5	chr16	-	1233	3	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	152	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135228	14117109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_14118074_14131679_14131878_14135157
ES.13170.6	chr16	-	1299	4	NNC	ENSMUSG00000022677.16	novel	1414	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	179.58718093326	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135207	14117109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_14118074_14122317_14122405_14131679_14131878_14135157
ES.13170.7	chr16	-	1349	4	NIC	ENSMUSG00000022677.16	novel	1465	5	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	175.075856575244	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135210	14117109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_14118074_14122317_14122452_14131679_14131878_14135157
ES.13170.8	chr16	-	1279	4	NIC	ENSMUSG00000022677.16	novel	1414	5	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	142.339968619733	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135189	14117109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_14118074_14128910_14128996_14131679_14131878_14135157
ES.13170.9	chr16	-	1404	5	FSM	ENSMUSG00000022677.16	ENSMUST00000120707.2	1414	5	8	2	5	-2	multi-exon	FALSE	canonical	0	0	junction_2	160.526282894733	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	False	NA	-6	True	NA	NA	NA	14135203	14117109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_14118074_14122317_14122429_14128910_14128996_14131679_14131878_14135157
ES.13171.1	chr16	-	173	1	Intergenic	novelGene_11044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	14140994	14140821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_14140800_14141000
ES.13172.1	chr16	+	5550	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	-426	1668	-424	27	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCCTGTCCTTGTT	6732	False	NA	NA	False	AAAAAG	-19	NA	14178997	14291933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.10	chr16	+	4773	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	-10	2029	-8	-194	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGCGTCTGTCACCATT	7148	False	NA	NA	False	ACTAAA	-14	NA	14179413	14291572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.12	chr16	+	5913	31	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-6	835	combination_of_known_junctions	FALSE	canonical	3	25	junction_20	25.3100770445291	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTATTTTTATTTTT	7150	False	NA	22	True	AGTAAA	-28	NA	14179415	14292741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.14	chr16	+	5820	31	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	1	823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	28.6774398361422	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAACGACCATTTT	7159	False	NA	10	True	AGTAAA	-16	NA	14179424	14292729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266362_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.15	chr16	+	5837	30	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-2	833	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	28.9034227696347	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7163	False	NA	20	True	AGTAAA	-26	NA	14179428	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.16	chr16	+	5826	30	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	1	830	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	29.2822177415248	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGACCATTTTATTTTTA	7166	False	NA	17	True	AGTAAA	-23	NA	14179431	14292736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.17	chr16	+	7104	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	9	-321	2	321	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTGCCACTGGGTCTT	7167	False	NA	NA	False	AGTAAA	-15	NA	14179432	14293922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.19	chr16	+	4921	31	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	28.8359536381619	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAGCCACACTGCCT	7169	False	NA	NA	False	NA	NA	NA	14179434	14291742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288492_14289801_14289969_14290674_14290870_14291323
ES.13172.2	chr16	+	6108	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	-174	858	-172	837	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTTTATTTTTTA	6984	False	NA	24	True	AGTAAA	-30	NA	14179249	14292743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.20	chr16	+	5677	30	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	4	821	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	29.1558198504756	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTAAACGACCATT	7169	False	NA	8	True	AGTAAA	-14	NA	14179434	14292727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275819_14277702_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.21	chr16	+	5737	30	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-4	829	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.6027779431336	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACCATTTTATTTTT	7170	False	NA	16	True	AGTAAA	-22	NA	14179435	14292735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.24	chr16	+	4052	27	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	19	7690	-2	-189	5prime_fragment	FALSE	canonical	3	92	junction_2	13.1272786131392	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTTGTCTTAAGGTC	7177	False	NA	NA	False	AATAAA	-23	NA	14179442	14285911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686
ES.13172.25	chr16	+	7289	27	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-2	833	intron_retention	FALSE	canonical	1	2	junction_15	38.2561438775355	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7177	False	NA	20	True	AGTAAA	-26	NA	14179442	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14257850_14257924_14261211_14263334_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.26	chr16	+	5791	31	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-2	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	33.8279306031109	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTTTCTAAACGACC	7177	False	NA	5	True	AGTAAA	-11	NA	14179442	14292724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261261_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.30	chr16	+	5806	31	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	4	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.8575235712746	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTTTCTAAACGACC	7183	False	NA	5	True	AGTAAA	-11	NA	14179448	14292724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263240_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.32	chr16	+	5846	30	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	5	837	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	28.4991603439322	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTTTATTTTTTA	7184	False	NA	24	True	AGTAAA	-30	NA	14179449	14292743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.33	chr16	+	7629	29	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	6	829	intron_retention	FALSE	canonical	1	3	junction_13	29.3951570008061	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACCATTTTATTTTT	7185	False	NA	16	True	AGTAAA	-22	NA	14179450	14292735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14257850_14257924_14261211_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.34	chr16	+	5930	31	NNC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	-198	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8766726307278	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTTTCTAAACGACC	NA	False	NA	5	True	AGTAAA	-11	NA	14183427	14292724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14183527_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.35	chr16	+	5879	31	NNC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	17	827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.3278436219688	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACGACCATTTTATTT	NA	False	NA	14	True	AGTAAA	-20	NA	14183642	14292733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14183713_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277825_14278785_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.36	chr16	+	5859	31	NNC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	19	827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.6778784915398	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACGACCATTTTATTT	NA	False	NA	14	True	AGTAAA	-20	NA	14183644	14292733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14183713_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277825_14278785_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285704_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.37	chr16	+	5758	31	NNC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	26	829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2174397876307	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACCATTTTATTTTT	NA	False	NA	16	True	AGTAAA	-22	NA	14183651	14292735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14183713_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231201_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266362_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.38	chr16	+	5852	31	NIC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	54	833	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.8303118519472	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	NA	False	NA	20	True	AGTAAA	-26	NA	14183679	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14183713_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.39	chr16	+	5879	31	NIC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	54	833	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.8766726307278	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	NA	False	NA	20	True	AGTAAA	-26	NA	14183679	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14183713_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.4	chr16	+	8761	29	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-16	833	intron_retention	FALSE	canonical	0	0	junction_10	29.7116241939901	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7140	False	NA	20	True	AGTAAA	-26	NA	14179405	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231312_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.40	chr16	+	5743	30	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-4049	831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	29.2931389661046	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACCATTTTATTTTTAT	60	False	NA	18	True	AGTAAA	-24	NA	14207767	14292737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277834_14278767_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.41	chr16	+	5534	28	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	32392	872	-1	823	3prime_fragment	FALSE	canonical	3	101	junction_6	17.0322859720033	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAACGACCATTTT	484	False	NA	10	True	AGTAAA	-16	NA	14211815	14292729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.43	chr16	+	5191	25	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	2653	833	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	27.1438746415385	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	3960	False	NA	20	True	AGTAAA	-26	NA	14222876	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.44	chr16	+	5218	25	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	43453	862	2653	833	3prime_fragment	FALSE	canonical	3	101	junction_3	17.3923274910391	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	3960	False	NA	20	True	AGTAAA	-26	NA	14222876	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.45	chr16	+	4473	21	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	58139	901	17339	794	3prime_fragment	FALSE	canonical	3	108	junction_2	16.6687582020977	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTTGCAGTAAAGAAAAA	NA	False	NA	-19	True	NA	NA	NA	14237562	14292700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.46	chr16	+	3966	17	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-21022	836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.5485823042239	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTATTTTTATTTTTT	NA	False	NA	23	True	AGTAAA	-29	NA	14257849	14292742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14257924_14261211_14261339_14263164_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276869_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.47	chr16	+	5438	14	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-16632	821	intron_retention	FALSE	canonical	3	110	junction_3	16.3594968166712	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTAAACGACCATT	NA	False	NA	8	True	AGTAAA	-14	NA	14262239	14292727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14263334_14265341_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.49	chr16	+	4540	4	NIC	ENSMUSG00000023088.18	novel	2642	8	NA	NA	5663	833	intron_retention	FALSE	canonical	3	153	junction_1	8.37987005998436	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	NA	False	NA	20	True	AGTAAA	-26	NA	14284539	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14285834_14288333_14289969_14290674_14290870_14291323
ES.13172.5	chr16	+	5742	30	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-15	790	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	28.9605496561315	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATTTGCAGTAAAGA	7141	False	NA	-23	True	NA	NA	NA	14179406	14292696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.50	chr16	+	2400	4	ISM	ENSMUSG00000023088.18	ENSMUST00000146032.2	2642	8	8991	-830	8991	830	3prime_fragment	FALSE	canonical	3	132	junction_1	18.0800688297608	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGACCATTTTATTTTTA	NA	False	NA	17	True	AGTAAA	-23	NA	14287867	14292736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.51	chr16	+	1418	1	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	12442	830	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGACCATTTTATTTTTA	NA	False	NA	17	True	AGTAAA	-23	NA	14291318	14292736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14291300_14292700
ES.13172.6	chr16	+	5989	32	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-14	837	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	35.3787886856767	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTATTTTTATTTTTTA	7142	False	NA	24	True	AGTAAA	-30	NA	14179407	14292743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_14179508_14207670_14207848_14208147_14208187_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13172.7	chr16	+	6101	32	NNC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	-14	833	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	35.2689384996603	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCATTTTATTTTTATTT	7142	False	NA	20	True	AGTAAA	-26	NA	14179407	14292739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_14179508_14207670_14207848_14208147_14208303_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ES.13173.1	chr16	-	1897	1	Antisense	novelGene_ENSMUSG00000023088.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCAATTTTTTAA	9685	False	NA	NA	False	NA	NA	NA	14208315	14206418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_14206400_14208300
ES.13174.1	chr16	+	158	1	Intergenic	novelGene_11045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14328117	14328275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_14328100_14328300
ES.13175.1	chr16	-	186	2	Antisense	novelGene_ENSMUSG00000075395.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTATAACCCATATTAA	NA	False	NA	NA	False	NA	NA	NA	14484658	14446586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_14446752_14484637
ES.13175.2	chr16	-	178	1	Intergenic	novelGene_11046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATTTTAAGACTATA	NA	False	NA	NA	False	NA	NA	NA	14446775	14446597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_14446600_14446800
ES.13176.1	chr16	+	2014	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	2	5	2	-5	multi-exon	FALSE	canonical	2	2	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAGTTACTCATATA	NA	False	NA	NA	False	AATAAA	-12	NA	14523717	14527244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14523917_14524574_14525124_14525978
ES.13177.1	chr16	+	908	2	Intergenic	novelGene_11047	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATCTATACTTTTGAT	NA	False	NA	NA	False	AGTAAA	-15	NA	14633037	14635255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_14633469_14634778
ES.13178.1	chr16	+	3554	6	FSM	ENSMUSG00000068617.6	ENSMUST00000090277.3	2752	6	12	-814	12	814	multi-exon	FALSE	canonical	0	0	junction_4	2.41660919471891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAACTTGGCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	14724512	14744815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_14724677_14734689_14734849_14735506_14735612_14738158_14738311_14738644_14738750_14741946
ES.13179.1	chr16	+	178	1	Intergenic	novelGene_11048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	15336387	15336565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15336400_15336600
ES.1318.1	chr1	-	5325	3	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	25918	intron_retention	FALSE	canonical	0	0	junction_2	2	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATTTTGTATTTCATC	NA	False	NA	NA	False	NA	NA	NA	132206193	132176535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132181184_132202453_132202875_132205937
ES.1318.10	chr1	-	2953	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1952	6204	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.8739876280488	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATAACCCTTCTTAAT	NA	False	NA	-4	True	AATAAA	-14	NA	132206197	132196249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132196405_132199994_132202560_132202761_132202875_132206077
ES.1318.11	chr1	-	175	1	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	1344	False	NA	NA	False	NA	NA	NA	132198968	132198793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132198800_132199000
ES.1318.2	chr1	-	3235	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGAAAAGAGTCACCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	132180134	132176899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132176900_132180100
ES.1318.3	chr1	-	2044	2	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	5589	23207	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGTTCTGTGACTCTA	NA	False	NA	0	True	NA	NA	NA	132202560	132179246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132181184_132202453
ES.1318.4	chr1	-	5723	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	19739	intron_retention	FALSE	canonical	0	0	junction_1	49.815214097257	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTTGTGAATAAGTA	NA	False	NA	NA	False	AATAAA	-8	NA	132206193	132182714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132188103_132202453_132202560_132202761_132202875_132206077
ES.1318.5	chr1	-	2509	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGATAATTTTTTT	2525	False	NA	NA	False	AATATA	-10	NA	132189499	132186990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132187000_132189500
ES.1318.6	chr1	-	1780	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	7494	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	132206193	132194959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
ES.1318.7	chr1	-	1356	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1952	6968	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGGAGTTTGCTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	132206197	132195485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
ES.1318.8	chr1	-	297	3	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	5653	6205	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	2.5	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATAACCCTTCTTAATT	NA	False	NA	-3	True	AATAAA	-15	NA	132202496	132196248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132196405_132196619_132196718_132202453
ES.1318.9	chr1	-	489	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1958	6205	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATAACCCTTCTTAATT	NA	False	NA	-3	True	AATAAA	-15	NA	132206191	132196248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
ES.13180.1	chr16	+	104	1	Intergenic	novelGene_11050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15382475	15382579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15382500_15382600
ES.13181.1	chr16	+	181	1	Intergenic	novelGene_11052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15401553	15401734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15401600_15401700
ES.13182.1	chr16	-	2254	1	Intergenic	novelGene_11049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGAGTGTCTTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	15369428	15367174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15367200_15369400
ES.13182.10	chr16	-	4198	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	10	-1	-7	1	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTGTGCCTGTGA	NA	False	NA	-3	True	AATAAA	-18	NA	15412378	15370539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.11	chr16	-	3689	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	3	-653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	717.045457066705	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGGGTATGTGAATA	NA	False	NA	NA	False	TATAAA	-14	NA	15412351	15371193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15377962_15378135_15394878_15395005_15398922_15399072_15412323
ES.13182.12	chr16	-	3528	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	26	653	-8	-653	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGGGTATGTGAATA	NA	False	NA	NA	False	TATAAA	-14	NA	15412362	15371193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.13	chr16	-	3392	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	19	-2175	2	-653	multi-exon	FALSE	canonical	3	117	junction_1	698.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGGGTATGTGAATA	NA	False	NA	NA	False	TATAAA	-14	NA	15412352	15371193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.14	chr16	-	3455	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	-14	766	-14	-766	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTTTTCTAGAATTTT	NA	False	NA	-1	True	AATAAA	-27	NA	15412402	15371306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.15	chr16	-	3293	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	4	-2061	4	-767	multi-exon	FALSE	canonical	3	117	junction_1	698.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACTTTTCTAGAATTT	NA	False	NA	-2	True	AATAAA	-26	NA	15412367	15371307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.16	chr16	-	3365	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	8	-768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	692.469493912909	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATACTTTTCTAGAATT	NA	False	NA	-3	True	AATAAA	-25	NA	15412363	15371308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15373547_15373595_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.17	chr16	-	3468	5	FSM	ENSMUSG00000022674.16	ENSMUST00000096234.4	609	5	2	-2861	2	-771	multi-exon	FALSE	canonical	2	4	junction_4	568.153808400507	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATATACTTTTCTAGA	NA	False	NA	-6	True	AATAAA	-22	NA	15412352	15371311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15411554_15411623_15412323
ES.13182.2	chr16	-	5582	1	Genic_Genomic	ENSMUSG00000022674.16	novel	NA	NA	NA	NA	39027	2213	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGACTACTTAC	NA	False	NA	NA	False	NA	NA	NA	15373309	15367727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_15367700_15373300
ES.13182.20	chr16	-	3327	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	4	876	4	-876	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCCTGTTATACTTTAA	NA	False	NA	-32	True	AATAAA	-29	NA	15412384	15371416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.21	chr16	-	3182	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	-7	-1939	-7	-889	multi-exon	FALSE	canonical	3	117	junction_1	698.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTCCAGTAGGTCCC	NA	False	NA	-45	True	AATAAA	-16	NA	15412378	15371429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.22	chr16	-	3141	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	-8	-889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	692.469493912909	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTCCAGTAGGTCCC	NA	False	NA	-45	True	AATAAA	-16	NA	15412362	15371429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15372155_15372305_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.23	chr16	-	3452	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	-7	-900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	717.045457066705	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAATTCTTGTTC	NA	False	NA	-56	True	AATAAA	-5	NA	15412361	15371440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15377962_15378135_15394878_15395005_15398922_15399072_15412323
ES.13182.25	chr16	-	3053	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	1	-1818	1	-1010	multi-exon	FALSE	canonical	3	117	junction_1	698.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTAGGATTGCAGGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	15412370	15371550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.26	chr16	-	1929	3	ISM	ENSMUSG00000022674.16	ENSMUST00000096234.4	609	5	13373	-1509	13355	705	3prime_fragment	FALSE	canonical	3	110	junction_1	621	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTAGTATACTGATTAC	NA	False	NA	NA	False	AGTAAA	-10	NA	15398981	15372663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_15374408_15394878_15395005_15398922
ES.13182.27	chr16	-	1656	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	13	2538	-4	290	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTTTCCTCCCCTAT	NA	False	NA	NA	False	NA	NA	NA	15412375	15373078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.28	chr16	-	1336	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	24	2847	7	-19	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAATAAGAAATACT	NA	False	NA	NA	False	NA	NA	NA	15412364	15373387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.29	chr16	-	1409	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	497	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	692.469493912909	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTATTTCTGTTACATT	NA	False	NA	NA	False	AATAAA	-24	NA	15413140	15373532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323_15412515_15413072
ES.13182.3	chr16	-	4798	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	13	-604	-4	4	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTTTTGCCCCATCTC	NA	False	NA	NA	False	AATAAA	-19	NA	15412375	15369936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.30	chr16	-	1251	5	FSM	ENSMUSG00000022674.16	ENSMUST00000096234.4	609	5	-8	-634	-8	-170	multi-exon	FALSE	canonical	2	4	junction_4	568.153808400507	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGTGCTATTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	15412362	15373538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15411554_15411623_15412323
ES.13182.31	chr16	-	1073	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	-8	171	-8	-171	multi-exon	FALSE	canonical	3	117	junction_1	698.5	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412379	15373539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.33	chr16	-	1248	5	NNC	ENSMUSG00000022674.16	novel	609	5	NA	NA	-8	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	571.163888476854	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412362	15373539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15394878_15395005_15398922_15399072_15401462_15401529_15412323
ES.13182.34	chr16	-	1218	4	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	5	-171	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	607.03047699436	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412331	15373539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15394878_15395005_15398922_15399072_15412256
ES.13182.35	chr16	-	997	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	24	3186	7	18	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTTAAAAGCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	15412364	15373726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.36	chr16	-	1969	1	Intergenic	novelGene_11051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCAAAAAGAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	15401480	15399511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15399500_15401500
ES.13182.37	chr16	-	176	1	Intergenic	novelGene_11053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	15406685	15406509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15406500_15406700
ES.13182.38	chr16	-	1081	1	FSM	ENSMUSG00000022674.16	ENSMUST00000229244.2	2469	1	12	1376	-6	-1376	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTGATTGCATTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	15412342	15411261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15411300_15412300
ES.13182.4	chr16	-	4652	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	16	-3432	-1	4	multi-exon	FALSE	canonical	3	117	junction_1	698.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTTTTGCCCCATCTC	NA	False	NA	NA	False	AATAAA	-19	NA	15412355	15369936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.5	chr16	-	4538	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	14	-345	-3	-255	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACCATTTTGTAAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	15412374	15370195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ES.13182.7	chr16	-	4583	4	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	2	-255	intron_retention	FALSE	canonical	3	23	junction_3	607.03047699436	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACCATTTTGTAAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	15412352	15370195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15374408_15394878_15395005_15398922_15399072_15412256
ES.13182.8	chr16	-	4404	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	5	-3173	5	-255	multi-exon	FALSE	canonical	3	117	junction_1	698.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACCATTTTGTAAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	15412366	15370195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13182.9	chr16	-	4058	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	7	-2829	7	1	multi-exon	FALSE	canonical	3	117	junction_1	698.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTGTGCCTGTGA	NA	False	NA	-3	True	AATAAA	-18	NA	15412364	15370539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15374408_15398922_15399072_15412323
ES.13183.1	chr16	+	179	1	Intergenic	novelGene_11054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	15413956	15414135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15414000_15414100
ES.13184.1	chr16	+	176	1	Intergenic	novelGene_11055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTTTAATTCCCCA	NA	False	NA	NA	False	NA	NA	NA	15415847	15416023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15415800_15416000
ES.13185.1	chr16	-	255	1	Intergenic	novelGene_11056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAGAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-37	NA	15431306	15431051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15431100_15431300
ES.13186.1	chr16	+	2263	1	Antisense	novelGene_ENSMUSG00000022673.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	15443695	15445958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_15443700_15446000
ES.13187.1	chr16	+	12919	86	FSM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	-252	-20	-229	20	multi-exon	TRUE	canonical	3	25	junction_36	18.5618353107608	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTCTTAATTTCACTGA	3273	False	NA	40	True	AATAAA	-36	NA	15455500	15660119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.10	chr16	+	12691	86	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	-9	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_42	19.7042282009862	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTCTTAATTTCAC	3516	False	NA	37	True	AATAAA	-33	NA	15455743	15660116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547684_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.11	chr16	+	12486	85	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_38	19.2967744593532	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCCTTGTTTCAAAGA	3517	False	NA	19	True	AATAAA	-15	NA	15455744	15660098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.12	chr16	+	12446	85	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	-7	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	21.7556258525428	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	3518	False	NA	-5	True	NA	NA	NA	15455745	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532886_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15558062_15558195_15570599_15570734_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.14	chr16	+	11134	72	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	31392	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_58	21.3417511743033	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTCCTTGTTTCAAA	NA	False	NA	17	True	AATAAA	-13	NA	15487144	15660096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628566_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.15	chr16	+	11060	72	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	31403	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_47	20.4720235750182	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTTGTTTCAAAGAATC	NA	False	NA	22	True	AATAAA	-18	NA	15487155	15660101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.16	chr16	+	10756	69	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	36548	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_66	20.1583856094833	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTCTTCCTTGTTTC	NA	False	NA	14	True	AATAAA	-10	NA	15492300	15660093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654100_15655826_15656016_15656948_15657089_15659634
ES.13187.17	chr16	+	5312	3	NIC	ENSMUSG00000022672.9	novel	3063	22	NA	NA	36577	1981	intron_retention	FALSE	canonical	3	60	junction_2	17	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAAATCCATTTA	NA	False	NA	NA	False	NA	NA	NA	15492329	15504594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15494888_15496066_15496227_15502000
ES.13187.18	chr16	+	9286	58	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	64164	8	64164	-8	3prime_fragment	FALSE	canonical	3	25	junction_8	19.7687150050699	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATATTTCTTCCTTGTT	NA	False	NA	12	True	AATAAA	-8	NA	15519916	15660091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.19	chr16	+	8025	51	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	77976	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	22.7320830545729	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTGTTTCAAAGAATCA	NA	False	NA	23	True	AATAAA	-19	NA	15533728	15660102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570734_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625979_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.2	chr16	+	4297	32	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	-31	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	19.8082378095495	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	3471	False	NA	-5	True	NA	NA	NA	15455698	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.20	chr16	+	7592	48	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	81454	-1	81454	1	3prime_fragment	FALSE	canonical	3	27	junction_1	19.0476517600875	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTTGTTTCAAAGAAT	NA	False	NA	21	True	AATAAA	-17	NA	15537206	15660100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.21	chr16	+	7062	45	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	89693	25	89693	-25	3prime_fragment	FALSE	canonical	3	30	junction_6	18.7621448270819	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	NA	False	NA	-5	True	NA	NA	NA	15545445	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.23	chr16	+	6574	41	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	96091	25	96091	-25	3prime_fragment	FALSE	canonical	3	30	junction_2	18.4788899828967	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	NA	False	NA	-5	True	NA	NA	NA	15551843	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.24	chr16	+	4717	23	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	98925	34947	98925	-34947	internal_fragment	FALSE	canonical	3	32	junction_1	10.0289869135619	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGGGTGTCAGGGT	NA	False	NA	NA	False	AATAAA	-25	NA	15554677	15625152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785
ES.13187.27	chr16	+	6601	30	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	130733	17	intron_retention	FALSE	canonical	3	51	junction_3	15.4698894369494	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTCTTAATTTCAC	NA	False	NA	37	True	AATAAA	-33	NA	15586485	15660116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.28	chr16	+	4764	28	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	134177	20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	20.7955624685014	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTCTTAATTTCACTGA	NA	False	NA	40	True	AATAAA	-36	NA	15589929	15660119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.29	chr16	+	3247	1	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	149848	-51252	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCTGAACCAGAGGGAT	1116	False	NA	NA	False	NA	NA	NA	15605600	15608847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15605600_15608800
ES.13187.3	chr16	+	13575	86	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	-13	17	intron_retention	FALSE	canonical	0	0	junction_55	22.6552131996392	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTCTTAATTTCAC	3489	False	NA	37	True	AATAAA	-33	NA	15455716	15660116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15455911_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15542747_15543096_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585733_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625442_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.30	chr16	+	5292	19	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	155068	-22	155068	22	3prime_fragment	FALSE	canonical	3	60	junction_2	11.9222015118387	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTAATTTCACTGATT	6336	False	NA	42	True	AATAAA	-38	NA	15610820	15660121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.31	chr16	+	4551	18	NNC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	160490	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.5750574305599	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	NA	False	NA	-5	True	NA	NA	NA	15616242	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651538_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.32	chr16	+	5246	15	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	169086	12	intron_retention	FALSE	canonical	3	63	junction_1	10.3765827413342	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAATCAGCTCTTAAT	NA	False	NA	32	True	AATAAA	-28	NA	15624838	15660111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.33	chr16	+	2701	16	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	170144	25	170144	-25	3prime_fragment	FALSE	canonical	3	63	junction_1	10.0323919824182	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	NA	False	NA	-5	True	NA	NA	NA	15625896	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.34	chr16	+	1980	12	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	178680	-1	178680	1	3prime_fragment	FALSE	canonical	3	80	junction_2	7.48441907736464	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTTGTTTCAAAGAAT	NA	False	NA	21	True	AATAAA	-17	NA	15634432	15660100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.35	chr16	+	5543	8	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	191922	-3	intron_retention	FALSE	canonical	3	81	junction_2	7.8010988237006	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTCCTTGTTTCAAA	9810	False	NA	17	True	AATAAA	-13	NA	15647674	15660096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948
ES.13187.36	chr16	+	1135	6	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	197261	25	197261	-25	3prime_fragment	FALSE	canonical	3	87	junction_1	4.67332857821917	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAATATGACA	NA	False	NA	-5	True	NA	NA	NA	15653013	15660074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.4	chr16	+	4492	33	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	-26	128255	-3	29231	5prime_fragment	FALSE	canonical	3	48	junction_22	12.5198280239786	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCATGGCTGATT	3499	False	NA	NA	False	AGTAAA	-17	NA	15455726	15531844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443
ES.13187.5	chr16	+	6467	47	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	-16	107083	7	50403	5prime_fragment	FALSE	canonical	3	25	junction_36	18.4941236260508	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCGTTCTCATGTTCTTT	3509	False	NA	NA	False	ATTAAA	-22	NA	15455736	15553016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763
ES.13187.6	chr16	+	12519	85	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_48	19.5712656406148	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTCCTTGTTTCAAA	3509	False	NA	17	True	AATAAA	-13	NA	15455736	15660096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ES.13187.7	chr16	+	8803	62	ISM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	-13	62468	10	-62468	5prime_fragment	FALSE	canonical	3	25	junction_36	17.9877380671941	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAACCTGTCTCTTTAGG	3512	False	NA	NA	False	NA	NA	NA	15455739	15597631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241
ES.13187.8	chr16	+	10423	65	NIC	ENSMUSG00000022672.9	novel	12647	86	NA	NA	11	-51280	intron_retention	FALSE	canonical	3	25	junction_35	17.5129137620643	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3513	False	NA	NA	False	NA	NA	NA	15455740	15608819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313
ES.13188.1	chr16	-	4667	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	-446	1555	at_least_one_novel_splicesite	TRUE	non_canonical	3	128	junction_1	350.692479023645	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTCTAAATTTTGTAA	NA	False	NA	NA	False	AATAAA	-24	NA	15455710	15440205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440367_15441289_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.10	chr16	-	7576	15	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	73	1498	intron_retention	FALSE	non_canonical	3	128	junction_1	364.018613563109	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGACTAAATAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	15455191	15440262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440367_15441289_15442634_15443425_15443560_15443899_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.11	chr16	-	4142	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	27	1498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	507.036472430732	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGACTAAATAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	15455237	15440262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440375_15441296_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454045_15454214_15454484_15454647_15454974
ES.13188.15	chr16	-	3736	15	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	71	1492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	518.069242279368	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCCACATTGACTAAATA	NA	False	NA	NA	False	NA	NA	NA	15455193	15440268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440367_15441289_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15452991_15454184_15454214_15454484_15454647_15454974
ES.13188.16	chr16	-	3592	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	16	-19	16	19	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTGGAATTCTCACAG	NA	False	NA	NA	False	AATAAA	-39	NA	15455248	15441741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.19	chr16	-	3861	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	-442	170	-442	43	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTAAAGACTATATTT	NA	False	NA	35	True	TTTAAA	-24	NA	15455706	15441930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.20	chr16	-	3274	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	87	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	512.118588696885	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	-1	True	AATAAA	-15	NA	15455177	15441966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445521_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452315_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.21	chr16	-	3467	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	1	7	intron_retention	FALSE	canonical	3	1276	junction_6	135.200248309155	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	-1	True	AATAAA	-15	NA	15455263	15441966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.22	chr16	-	2973	14	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	47	7	combination_of_known_splicesites	FALSE	canonical	1	27	junction_1	389.286815666895	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	-1	True	AATAAA	-15	NA	15455217	15441966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.24	chr16	-	3724	14	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	21	7	intron_retention	FALSE	canonical	3	1276	junction_6	134.126011579591	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTAAAATTATTT	NA	False	NA	-1	True	AATAAA	-15	NA	15455243	15441966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15454647_15454974
ES.13188.25	chr16	-	3237	15	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	38	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	524.237911405787	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGGTTTAAAATTATT	NA	False	NA	-2	True	AATAAA	-14	NA	15455226	15441967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443898_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454287_15454993
ES.13188.27	chr16	-	3269	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	87	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	391.93953048341	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTGGTTTAAAATTAT	NA	False	NA	-3	True	AATAAA	-13	NA	15455177	15441968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15450005_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.28	chr16	-	3510	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	36	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	392.147217253929	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTGGTTTAAAATTAT	NA	False	NA	-3	True	AATAAA	-13	NA	15455228	15441968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454809
ES.13188.29	chr16	-	3590	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	87	4	intron_retention	FALSE	canonical	3	1276	junction_6	134.891944661992	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455177	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.3	chr16	-	5108	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	30	-1549	30	1549	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAATATGTTTCTAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	15455234	15440211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.31	chr16	-	3283	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	401.462098244069	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455263	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.32	chr16	-	3289	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	34	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	388.944463330635	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455230	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454229_15454556_15454647_15454974
ES.13188.34	chr16	-	3350	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	53	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	391.93953048341	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455211	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449707_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.35	chr16	-	4513	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	45	4	intron_retention	FALSE	canonical	3	1276	junction_6	122.989380659885	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455219	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.36	chr16	-	3321	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	80	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	388.944463330635	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTGGTTTAAAATTA	NA	False	NA	-4	True	AATAAA	-12	NA	15455184	15441969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454235_15454484_15454647_15454974
ES.13188.38	chr16	-	4712	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	51	3	intron_retention	FALSE	canonical	3	1276	junction_5	118.224276660239	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATACTTGGTTTAAAATT	NA	False	NA	-5	True	AATAAA	-11	NA	15455213	15441970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.41	chr16	-	3328	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	383.204592874355	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATACTTGGTTTAAAAT	NA	False	NA	-6	True	AATAAA	-10	NA	15455223	15441971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443553_15443901_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.42	chr16	-	3254	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	80	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	379.752833885081	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455184	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454540_15454580_15454647_15454974
ES.13188.44	chr16	-	3317	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	392.164398633476	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455219	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453955_15454058_15454214_15454484_15454647_15454974
ES.13188.46	chr16	-	3214	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	1	10	junction_4	402.4824245117	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455231	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.47	chr16	-	3281	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	85	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	391.094782487428	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455179	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448133_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.49	chr16	-	6033	14	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	36	-1	intron_retention	FALSE	canonical	3	1361	junction_13	118.95407099346	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455228	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15448385_15449562_15449684_15449980_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.5	chr16	-	4153	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	90	1548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	579.407010981918	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCAATATGTTTCTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	15455174	15440212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440367_15441289_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449956_15450207_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.50	chr16	-	4335	8	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	33	-1	intron_retention	FALSE	canonical	3	1332	junction_7	142.6578610036	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15453137	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15448385_15449562_15449684_15449980_15450202_15452302
ES.13188.51	chr16	-	3439	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	27	-1	intron_retention	FALSE	canonical	3	1276	junction_6	131.568248759466	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455237	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15454214_15454484_15454647_15454974
ES.13188.53	chr16	-	3352	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	392.144270503713	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATACTTGGTTTAA	NA	False	NA	-9	True	AATAAA	-7	NA	15455221	15441974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453210_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.56	chr16	-	3280	16	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	82	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	392.164398633476	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAATACTTGGTTTA	NA	False	NA	-10	True	AATAAA	-6	NA	15455182	15441975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453968_15454070_15454214_15454484_15454647_15454974
ES.13188.57	chr16	-	3221	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	85	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.752833885081	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATTTTCCTAAATAAA	NA	False	NA	-35	True	ATTAAA	-32	NA	15455179	15442000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15442098_15442140_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.58	chr16	-	3231	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	87	271	87	-58	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCCTTCTGTTTTT	NA	False	NA	-66	True	ATTAAA	-1	NA	15455177	15442031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.59	chr16	-	2833	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	71	685	71	-472	multi-exon	FALSE	canonical	3	1276	junction_6	130.715909088714	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGTATTTTGTTAGTA	NA	False	NA	NA	False	TATAAA	-14	NA	15455193	15442445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.6	chr16	-	5027	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	9	1543	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	401.462098244069	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTAGCAATATGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	15455255	15440217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.60	chr16	-	5575	12	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	87	-2331	intron_retention	FALSE	canonical	3	1276	junction_3	103.639473637547	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTGTAGACCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	15455177	15444304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ES.13188.9	chr16	-	3957	17	NNC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	70	1499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	487.083908967439	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGACTAAATAGGCTCTA	NA	False	NA	NA	False	NA	NA	NA	15455194	15440261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15440367_15441289_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15455112
ES.13189.1	chr16	-	4151	31	Antisense	novelGene_ENSMUSG00000022672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCATGCGCGTCTCAGCAC	NA	False	NA	NA	False	NA	NA	NA	15531597	15455735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_15455906_15466582_15466659_15466749_15466843_15468512_15468588_15469293_15469402_15470099_15470214_15470312_15470413_15474117_15474276_15480844_15480992_15482070_15482236_15485451_15485621_15487144_15487194_15488374_15488501_15490118_15490272_15491830_15491944_15492300_15492461_15493141_15493229_15494765_15494882_15496060_15496225_15501998_15502108_15505222_15505320_15507139_15507297_15508125_15508276_15514986_15515094_15516659_15516885_15518503_15518597_15519912_15520019_15523034_15523167_15524585_15524839_15526570_15526794_15531441
ES.13189.10	chr16	-	272	1	Intergenic	novelGene_11059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCACAGGTAAGTGTAGC	NA	False	NA	NA	False	NA	NA	NA	15477172	15476900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15476900_15477200
ES.13189.11	chr16	-	159	1	Intergenic	novelGene_11060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	15477172	15477013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15477000_15477200
ES.13189.12	chr16	-	179	1	Intergenic	novelGene_11061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAGGAA	NA	False	NA	NA	False	NA	NA	NA	15483339	15483160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15483200_15483300
ES.13189.2	chr16	-	4582	2	Antisense	novelGene_ENSMUSG00000022672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTATATTGAGAAAAACG	NA	False	NA	NA	False	NA	NA	NA	15464955	15459828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_15460127_15460671
ES.13189.3	chr16	-	173	1	Intergenic	novelGene_11057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	15462582	15462409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15462400_15462600
ES.13189.4	chr16	-	3266	2	Antisense	novelGene_ENSMUSG00000022672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCCAGTCCCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	15467326	15463969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_15466659_15466749
ES.13189.6	chr16	-	4686	33	Antisense	novelGene_ENSMUSG00000022672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGCCTTTAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	15531597	15465368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_15465985_15466577_15466659_15466749_15466843_15468512_15468588_15469293_15469402_15470099_15470214_15470312_15470418_15472546_15472600_15472682_15472714_15474117_15474276_15480844_15480994_15482071_15482236_15485451_15485621_15487144_15487194_15488374_15488501_15490118_15490272_15491830_15491944_15492300_15492461_15493141_15493229_15494765_15494882_15496060_15496225_15501998_15502106_15505221_15505320_15507139_15507292_15508125_15508276_15514986_15515094_15516659_15516885_15518503_15518597_15519912_15520019_15523034_15523167_15524585_15524839_15526570_15526794_15531441
ES.13189.7	chr16	-	6633	10	Antisense	novelGene_ENSMUSG00000022672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGGGCCTTTAATCCC	NA	False	NA	NA	False	NA	NA	NA	15486261	15465370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_15466659_15466749_15466843_15468512_15468588_15469293_15469402_15470099_15470214_15470312_15471286_15471416_15474276_15480844_15480994_15482071_15482236_15485451
ES.13189.9	chr16	-	227	1	Intergenic	novelGene_11058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	15467647	15467420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_15467400_15467600
ES.1319.1	chr1	+	2954	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	-42	195	-42	0	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	132243821	132261031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ES.1319.2	chr1	+	2990	8	NNC	ENSMUSG00000009772.16	novel	2936	8	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.6120192533439	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTCTCTTGTTCAC	NA	False	NA	NA	False	ATTAAA	-19	NA	132243876	132261026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132244211_132245159_132245256_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ES.1319.3	chr1	+	2794	8	NNC	ENSMUSG00000009772.16	novel	2936	8	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.5616506129209	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACAGTCTCTTGTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	132243876	132261025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058_132260850_132260948
ES.1319.4	chr1	+	5589	6	ISM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	5803	195	-5667	0	3prime_fragment	FALSE	canonical	3	25	junction_5	6.94550214167413	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTTGTTCACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	132249666	132261031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ES.1319.5	chr1	+	2661	1	NIC	ENSMUSG00000009772.16	novel	2936	8	NA	NA	3024	-13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTGGAAAAACAGTCTC	NA	False	NA	NA	False	ATTAAA	-11	NA	132258357	132261018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132258400_132261000
ES.13190.1	chr16	-	1127	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	-93	1	-71	-1	multi-exon	FALSE	canonical	3	566	junction_1	21	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGGAGTCCTGGTT	NA	False	NA	-3	True	ATTAAA	-21	NA	15681304	15666305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15666594_15680261_15680408_15680611
ES.13190.2	chr16	-	736	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	28	-6	6	-1	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGTGGAGTCCTGG	NA	False	NA	-5	True	ATTAAA	-19	NA	15681205	15666307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
ES.13191.1	chr16	+	1232	1	FSM	ENSMUSG00000071637.6	ENSMUST00000096232.6	3746	1	-51	2565	-51	-1515	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATGTTCATT	NA	False	NA	8	True	AATAAA	-17	NA	15705098	15706330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_15705100_15706300
ES.13192.1	chr16	+	5915	1	Intergenic	novelGene_11062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCATTTAGTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	15756899	15762814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15756900_15762800
ES.13193.1	chr16	+	2761	1	Intergenic	novelGene_11063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCATACATCTGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	15825815	15828576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15825800_15828600
ES.13194.1	chr16	+	838	2	Antisense	novelGene_ENSMUSG00000041974.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGCACTCACCATCAT	NA	False	NA	NA	False	NA	NA	NA	15842498	15845403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_15843124_15845190
ES.13195.1	chr16	+	2241	2	Antisense	novelGene_ENSMUSG00000041974.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15909812	15912781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_15911094_15911821
ES.13196.1	chr16	+	3512	2	Antisense	novelGene_ENSMUSG00000041974.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTGAGAATAGGCACAA	NA	False	NA	NA	False	NA	NA	NA	15960053	15963660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_15963418_15963512
ES.13196.2	chr16	+	1295	1	Intergenic	novelGene_11064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15962094	15963389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_15962100_15963400
ES.13197.1	chr16	-	3339	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	-55	-2	-55	2	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTAGTGTTCT	1892	False	NA	2	True	AATAAA	-20	NA	15964770	15707085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.10	chr16	-	3440	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	72.217124142343	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1987	False	NA	0	True	AATAAA	-18	NA	15964675	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964410
ES.13197.11	chr16	-	4808	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	10	0	intron_retention	FALSE	canonical	3	256	junction_11	28.2434849911346	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	2004	False	NA	0	True	AATAAA	-18	NA	15964658	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.13	chr16	-	3216	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.6439348757914	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	2004	False	NA	-3	True	AATAAA	-15	NA	15964658	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730668_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.14	chr16	-	3016	17	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	74.2807175517307	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1947	False	NA	-3	True	AATAAA	-15	NA	15964715	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.15	chr16	-	3177	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	17	junction_13	71.3702958926364	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1948	False	NA	-3	True	AATAAA	-15	NA	15964714	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.16	chr16	-	1741	1	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	255837	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	NA	False	NA	-3	True	AATAAA	-15	NA	15708831	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707100_15708800
ES.13197.18	chr16	-	3188	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	73.5628772791022	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1984	False	NA	-3	True	AATAAA	-15	NA	15964678	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.19	chr16	-	3688	21	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	93.8559934154447	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	2009	False	NA	-3	True	AATAAA	-15	NA	15964653	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15871838_15872310_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.2	chr16	-	3244	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	72.9533680224373	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1979	False	NA	0	True	AATAAA	-18	NA	15964683	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865958_15871124_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.20	chr16	-	2785	18	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	76.3514456483645	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	2000	False	NA	-3	True	AATAAA	-15	NA	15964662	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.21	chr16	-	2999	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	73.6442273516548	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1976	False	NA	-3	True	AATAAA	-15	NA	15964686	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.22	chr16	-	3231	18	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-10	-3	intron_retention	FALSE	canonical	2	17	junction_12	73.3683412297817	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1984	False	NA	-3	True	AATAAA	-15	NA	15964678	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.24	chr16	-	3267	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	72.8974538729813	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGGTTTTAGT	1977	False	NA	-3	True	AATAAA	-15	NA	15964685	15707090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730461_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.25	chr16	-	3307	19	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	94.8550063108017	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	1985	False	NA	-4	True	AATAAA	-14	NA	15964677	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964440
ES.13197.26	chr16	-	3307	18	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	2	-4	intron_retention	FALSE	canonical	2	4	junction_9	75.5831309789513	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	1996	False	NA	-4	True	AATAAA	-14	NA	15964666	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.27	chr16	-	2605	15	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	80.1673313788613	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	2005	False	NA	-4	True	AATAAA	-14	NA	15964657	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.29	chr16	-	3075	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	15	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	74.0284396468223	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	2009	False	NA	-4	True	AATAAA	-14	NA	15964653	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.3	chr16	-	3535	19	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_4	74.6082153818809	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	2018	False	NA	0	True	AATAAA	-18	NA	15964644	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713505_15715087_15715182_15720772_15720915_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.30	chr16	-	3069	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	15	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	72.8215517210512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	2009	False	NA	-4	True	AATAAA	-14	NA	15964653	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.31	chr16	-	3370	21	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	93.0086017527411	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	1977	False	NA	-4	True	AATAAA	-14	NA	15964685	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15961558_15961681_15964608
ES.13197.34	chr16	-	3503	21	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	94.2276366041301	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTTTGTGGTTTTAG	1968	False	NA	-4	True	AATAAA	-14	NA	15964694	15707091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15858106_15858353_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.35	chr16	-	3005	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	64	213	17	-213	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCATGTCTTCTGTGTCT	2011	False	NA	NA	False	TTTAAA	-43	NA	15964651	15707300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.36	chr16	-	2792	19	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	36	5811	-11	-1650	5prime_fragment	FALSE	canonical	3	251	junction_2	28.9059778515717	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACACCACAAGTCACTTA	1983	False	NA	NA	False	ATTAAA	-13	NA	15964679	15712898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.37	chr16	-	2876	15	ISM	ENSMUSG00000041974.11	ENSMUST00000229846.2	6343	17	-46	10105	1	-10105	5prime_fragment	FALSE	canonical	3	256	junction_7	26.132804468479	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTACGTCACACTGAGA	1948	False	NA	NA	False	NA	NA	NA	15964714	15721353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.38	chr16	-	5234	1	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	238040	-10146	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	15726628	15721394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15721400_15726600
ES.13197.39	chr16	-	2843	14	NNC	ENSMUSG00000041974.11	novel	6343	17	NA	NA	15	-18336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.1922276751989	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACATGGTATATTAGCT	2009	False	NA	NA	False	AATAAA	-20	NA	15964653	15729584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855576_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.4	chr16	-	3235	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	96.1128145992713	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	2009	False	NA	0	True	AATAAA	-18	NA	15964653	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15779041_15779198_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.40	chr16	-	1815	4	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-10	-131936	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.856923211933	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	1984	False	NA	NA	False	NA	NA	NA	15964678	15843184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15844707_15957869_15957937_15958571_15958728_15964608
ES.13197.41	chr16	-	1055	7	ISM	ENSMUSG00000041974.11	ENSMUST00000229846.2	6343	17	-5	154536	-5	-154536	5prime_fragment	FALSE	canonical	3	275	junction_1	23.7375698466002	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTAGTGTTTTTGTG	1989	False	NA	NA	False	ATTAAA	-12	NA	15964673	15865784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.42	chr16	-	1004	4	ISM	ENSMUSG00000041974.11	ENSMUST00000229846.2	6343	17	15	224863	15	-224863	5prime_fragment	FALSE	canonical	3	281	junction_1	22.3954360429878	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCTTTGCTTACAATG	2009	False	NA	NA	False	NA	NA	NA	15964653	15936111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.5	chr16	-	3264	20	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.6439348757914	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1984	False	NA	0	True	AATAAA	-18	NA	15964678	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730693_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.6	chr16	-	3336	21	NNC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	94.1889059284585	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1984	False	NA	0	True	AATAAA	-18	NA	15964678	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15797053_15797145_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.7	chr16	-	2945	18	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	100.340320563549	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1945	False	NA	0	True	AATAAA	-18	NA	15964717	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15754416_15754558_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ES.13197.8	chr16	-	3197	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	72.4806487584407	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1965	False	NA	0	True	AATAAA	-18	NA	15964697	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15958571_15958728_15964608
ES.13197.9	chr16	-	2812	16	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	101.195432483663	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1977	False	NA	0	True	AATAAA	-18	NA	15964685	15707087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_15707650_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15957869_15957937_15958571_15958728_15964608
ES.13198.1	chr16	+	3080	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-154	-8	-154	8	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTCGATTGTTCTTGA	NA	False	NA	27	True	AATAAA	-27	NA	16031027	16090584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ES.13198.2	chr16	+	2576	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	-35	377	-35	-377	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTTTCTACTAACT	NA	False	NA	NA	False	AATAAA	-38	NA	16031146	16090199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ES.13198.3	chr16	+	1985	10	NIC	ENSMUSG00000041957.16	novel	2918	13	NA	NA	-12	-423	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	37.5424040088728	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAGATAAAC	NA	False	NA	NA	False	NA	NA	NA	16031169	16090153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16031460_16043164_16043278_16043583_16044156_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ES.13198.4	chr16	+	2922	6	FSM	ENSMUSG00000041957.16	ENSMUST00000161342.8	2931	6	26	-17	26	17	multi-exon	FALSE	canonical	3	76	junction_4	18.7232475815495	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGCATTTCTCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	16031207	16066370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729
ES.13198.5	chr16	+	4478	13	NNC	ENSMUSG00000041957.16	novel	2918	13	NA	NA	144	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.2393466642572	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCGCTTTGTCTGTGA	NA	False	NA	10	True	AATAAA	-10	NA	16031325	16090567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16082316_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ES.13199.1	chr16	+	1615	1	Intergenic	novelGene_11065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	16094221	16095836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16094200_16095800
ES.132.1	chr1	-	2386	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGAGCCTCTCACAAGG	NA	False	NA	NA	False	NA	NA	NA	14496599	14494213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_14494200_14496600
ES.1320.1	chr1	-	3950	5	FSM	ENSMUSG00000042066.17	ENSMUST00000045473.16	3410	5	-540	0	-540	0	multi-exon	FALSE	canonical	3	25	junction_4	2.38484800354236	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	False	NA	0	True	AATAAA	-23	NA	132319559	132284052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318714
ES.1320.2	chr1	-	5094	4	NIC	ENSMUSG00000042066.17	novel	3410	5	NA	NA	-448	0	intron_retention	FALSE	canonical	3	25	junction_3	2.62466929133727	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	False	NA	0	True	AATAAA	-23	NA	132319467	132284052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132285556_132286640_132288954_132308394_132308920_132318714
ES.1320.3	chr1	-	3580	4	NNC	ENSMUSG00000042066.17	novel	2771	4	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.490737563232	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGAGGTCTGCTG	NA	False	NA	-1	True	AATAAA	-22	NA	132295018	132284053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132285556_132286640_132286777_132288012_132288954_132294017
ES.1320.4	chr1	-	3851	5	NNC	ENSMUSG00000042066.17	novel	3410	5	NA	NA	-451	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	12.3566783562574	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGAGGTCTGCTG	NA	False	NA	-1	True	AATAAA	-22	NA	132319470	132284053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308911_132318714
ES.1320.5	chr1	-	6197	3	NIC	ENSMUSG00000042066.17	novel	3410	5	NA	NA	-469	-2	intron_retention	FALSE	canonical	3	25	junction_2	3	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTCTGAGGTCTGC	NA	False	NA	-3	True	AATAAA	-20	NA	132319488	132284055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132288954_132308394_132308920_132318714
ES.1320.6	chr1	-	877	1	Genic_Genomic	ENSMUSG00000042066.17	novel	NA	NA	NA	NA	-472	-29851	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTCAGAGAGGATGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	132319491	132318614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_132318600_132319500
ES.1320.7	chr1	-	296	1	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAAGAACTCGTGATC	NA	False	NA	NA	False	AAAAAG	-11	NA	132319357	132319061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132319100_132319400
ES.13200.1	chr16	+	1628	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-50	-4	-37	4	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACAATCCTTGCTCCTT	9469	False	NA	28	True	AATAAA	-33	NA	16120791	16127508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ES.13200.10	chr16	+	3478	4	FSM	ENSMUSG00000022792.17	ENSMUST00000159962.8	2805	4	11	-684	2	-6	multi-exon	FALSE	canonical	3	45	junction_2	149.404001136367	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCATTTCTTTACACAA	9517	False	NA	10	True	AATAAA	-15	NA	16120839	16127490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073
ES.13200.11	chr16	+	4034	3	ISM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	30	6	30	-6	intron_retention	FALSE	canonical	3	45	junction_2	141	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCATTTCTTTACACAA	9552	False	NA	10	True	AATAAA	-15	NA	16120874	16127490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16121612_16122399_16122568_16124361
ES.13200.12	chr16	+	1109	5	NIC	ENSMUSG00000022792.17	novel	1528	5	NA	NA	-271	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	175.73043987881	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	9823	False	NA	11	True	AATAAA	-16	NA	16121145	16127491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16121499_16122399_16122568_16124361_16124483_16125073_16125245_16127195
ES.13200.13	chr16	+	4541	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	466	-3479	-106	3471	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTAGTCTAATGTATTC	9988	False	NA	NA	False	AATAAA	-20	NA	16121310	16130975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
ES.13200.14	chr16	+	922	5	NIC	ENSMUSG00000022792.17	novel	1528	5	NA	NA	10	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	148.16270617129	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	NA	False	NA	11	True	AATAAA	-16	NA	16121426	16127491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16121612_16122399_16122568_16124361_16124464_16125073_16125245_16127195
ES.13200.15	chr16	+	7982	1	Antisense	novelGene_ENSMUSG00000022789.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTTTTTAAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	16139493	16147475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_16139500_16147500
ES.13200.16	chr16	+	6129	3	Antisense	novelGene_ENSMUSG00000022789.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTTTTTAAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	16139493	16147475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_16139538_16141190_16141290_16141489
ES.13200.17	chr16	+	3303	1	Antisense	novelGene_ENSMUSG00000022789.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAGAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	16160496	16163799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_16160500_16163800
ES.13200.2	chr16	+	1538	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	-15	5	1	-5	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	9507	False	NA	11	True	AATAAA	-16	NA	16120829	16127491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
ES.13200.3	chr16	+	1571	5	NIC	ENSMUSG00000022792.17	novel	1574	5	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	49	junction_3	122.683535977734	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACAATCCTTGCTCCTT	9507	False	NA	28	True	AATAAA	-33	NA	16120829	16127508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16121612_16122399_16122568_16124326_16124464_16125073_16125245_16127195
ES.13200.4	chr16	+	2686	6	NNC	ENSMUSG00000022792.17	novel	1574	5	NA	NA	1	37722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.942132891065	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGTTGTGACTGAAC	9507	False	NA	NA	False	NA	NA	NA	16120829	16165226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16154779_16154876_16163913
ES.13200.5	chr16	+	1418	4	FSM	ENSMUSG00000022792.17	ENSMUST00000159962.8	2805	4	1	1386	1	33	multi-exon	FALSE	canonical	3	45	junction_2	149.404001136367	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTCAAGTGTTGCATC	9507	False	NA	NA	False	NA	NA	NA	16120829	16125420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073
ES.13200.6	chr16	+	3515	4	FSM	ENSMUSG00000022792.17	ENSMUST00000161191.8	1412	4	1	-2104	1	-5	multi-exon	FALSE	canonical	3	300	junction_2	36.8088153692684	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	9516	False	NA	11	True	AATAAA	-16	NA	16120838	16127491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
ES.13200.7	chr16	+	6733	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-3	-5156	1	5156	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTTGATATTTTAGC	9516	False	NA	NA	False	AATAAA	-16	NA	16120838	16132660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ES.13200.8	chr16	+	1427	6	NNC	ENSMUSG00000022792.17	novel	1574	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.435892847947	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATTTCTTTACACAAG	9516	False	NA	11	True	AATAAA	-16	NA	16120838	16127491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16121185_16121321_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ES.13200.9	chr16	+	4107	3	ISM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	-3	12	1	-4	intron_retention	FALSE	canonical	3	300	junction_2	13.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTCTTTACACAAGA	9516	False	NA	12	True	AATAAA	-17	NA	16120838	16127492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16121612_16122399_16122568_16124326
ES.13201.1	chr16	+	477	1	Intergenic	novelGene_11068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	16170875	16171352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16170900_16171400
ES.13202.1	chr16	-	4569	1	Antisense	novelGene_ENSMUSG00000022792.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGAAATACAAGA	NA	False	NA	NA	False	NA	NA	NA	16128037	16123468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_16123500_16128000
ES.13202.10	chr16	-	3992	18	NIC	ENSMUSG00000022789.16	novel	2635	18	NA	NA	-3	52	combination_of_known_junctions	FALSE	canonical	3	157	junction_16	336.795184852445	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAATCTACTTCATAA	NA	False	NA	45	True	TATAAA	-18	NA	16176826	16130041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.100	chr16	-	2790	18	NIC	ENSMUSG00000022789.16	novel	2635	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_16	336.795184852445	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176829	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.101	chr16	-	7972	17	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	417	junction_5	263.054295726187	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176806	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16164010_16176627
ES.13202.102	chr16	-	2782	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_12	343.925581420684	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176828	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.103	chr16	-	7309	18	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	30	0	intron_retention	FALSE	canonical	3	332	junction_5	254.525965528132	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176772	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16164010_16176627
ES.13202.104	chr16	-	2756	1	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	1308	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16134002	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131200_16134000
ES.13202.105	chr16	-	2939	21	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	400.51053669036	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176814	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.106	chr16	-	2896	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_17	350.8684683735	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176825	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.107	chr16	-	2779	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_15	355.287537601588	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176851	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.108	chr16	-	5473	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	945	junction_3	106.025056000928	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176825	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.11	chr16	-	4096	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-60	52	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAATCTACTTCATAA	NA	False	NA	45	True	TATAAA	-18	NA	16176883	16130041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.110	chr16	-	2865	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	157	junction_16	337.763322881181	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176859	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.111	chr16	-	2929	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_18	340.731850442275	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176825	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.112	chr16	-	5492	17	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	306.624662402994	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176821	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16137396_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.113	chr16	-	4527	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	157	junction_16	321.32192353886	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCTGAAAATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	16176828	16131252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.114	chr16	-	2867	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	3	157	junction_17	327.192188774521	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCTGAAAATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	16176834	16131252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.115	chr16	-	3216	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	632	junction_4	191.240629561455	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCTGAAAATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	16176850	16131252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.117	chr16	-	2767	20	FSM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	-25	1151	-13	-6	multi-exon	FALSE	canonical	3	44	junction_19	330.475926430562	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCCTGAAAATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	16176422	16131252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.118	chr16	-	2633	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	5	-7	combination_of_known_splicesites	FALSE	canonical	2	37	junction_10	373.917473974873	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCCTGAAAATTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	16176797	16131253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.119	chr16	-	2860	19	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	430.225120513654	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCCTGAAAATTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	16176825	16131253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141842_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163868_16164010_16176627
ES.13202.122	chr16	-	2556	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-28	256	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCCTGTGCATATGAC	NA	False	NA	88	True	NA	NA	NA	16176851	16131594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.123	chr16	-	4468	12	NNC	ENSMUSG00000022789.16	novel	2635	18	NA	NA	-19556	170	intron_retention	FALSE	canonical	0	0	junction_2	347.22191441676	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCAAGTTTCCTATGA	NA	False	NA	2	True	AAAACA	-20	NA	16154866	16131680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132278_16134193_16134308_16134465_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716
ES.13202.124	chr16	-	2425	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-28	170	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCAAGTTTCCTATGA	NA	False	NA	2	True	AAAACA	-20	NA	16176851	16131680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.125	chr16	-	2467	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-2	168	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCAAGTTTCCTAT	NA	False	NA	0	True	AAAACA	-18	NA	16176817	16131682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.126	chr16	-	2343	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	17	1591	-4	166	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTTTTCAAGTTTCCT	NA	False	NA	-2	True	AAAACA	-16	NA	16176806	16131684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.127	chr16	-	4095	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	8	153	intron_retention	FALSE	canonical	3	417	junction_4	225.561028942896	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGTTTAATTCACATT	NA	False	NA	-15	True	AAAACA	-3	NA	16176794	16131697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.128	chr16	-	2418	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	2	148	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCACATGTTTAATTC	NA	False	NA	-20	True	NA	NA	NA	16176821	16131702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.129	chr16	-	2458	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-20	148	combination_of_known_splicesites	FALSE	canonical	3	32	junction_17	350.8684683735	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCACATGTTTAATTC	NA	False	NA	-20	True	NA	NA	NA	16176843	16131702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.13	chr16	-	4194	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	2	intron_retention	FALSE	canonical	3	44	junction_18	306.223013424232	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176402	16130091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.130	chr16	-	2300	20	FSM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	-11	1604	1	145	multi-exon	FALSE	canonical	3	44	junction_19	330.475926430562	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATCACATGTTTAA	NA	False	NA	-23	True	NA	NA	NA	16176408	16131705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.131	chr16	-	2483	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-30	145	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	415.656774294153	1130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATCACATGTTTAA	NA	False	NA	-23	True	NA	NA	NA	16176853	16131705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16162689_16162771_16163861_16164010_16176627
ES.13202.132	chr16	-	1083	8	ISM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	12397	17450	12397	6796	internal_fragment	FALSE	canonical	3	1030	junction_7	76.9799867975238	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAGGAGTATTGTGTCA	NA	False	NA	NA	False	TATAAA	-13	NA	16164000	16147551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861
ES.13202.133	chr16	-	2865	1	Intergenic	novelGene_11067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	981	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTCAGCAACGTGGCA	NA	False	NA	NA	False	NA	NA	NA	16170660	16167795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16167800_16170700
ES.13202.134	chr16	-	6700	1	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	29	-15726	mono-exon	FALSE	NA	NA	NA	NA	NA	981	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTTAAGTTTATGAA	NA	False	NA	NA	False	AATAAA	-14	NA	16176773	16170073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16170100_16176800
ES.13202.15	chr16	-	3908	18	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	360.390983377295	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176817	16130091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16159285_16159333_16163861_16164010_16176627
ES.13202.16	chr16	-	3697	17	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	371.207152409541	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176828	16130091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.17	chr16	-	4096	20	NIC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	-26	2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_17	413.303996963273	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	False	NA	-5	True	AATAAA	-31	NA	16176849	16130091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.18	chr16	-	4026	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	344.138106014258	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176797	16130093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141203_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.19	chr16	-	4029	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_17	327.192188774521	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176837	16130093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.2	chr16	-	158	1	Intergenic	novelGene_11066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	16124058	16123900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16123900_16124100
ES.13202.21	chr16	-	3844	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	340.153269738188	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176418	16130093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.22	chr16	-	3920	20	FSM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	-20	-7	-8	-1	multi-exon	FALSE	canonical	3	44	junction_19	330.475926430562	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTTCTGATGTGCTT	NA	False	NA	-8	True	AATAAA	-28	NA	16176417	16130094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.23	chr16	-	4118	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-40	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_18	340.731850442275	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTCTTTCTGATGTGCT	NA	False	NA	-9	True	AATAAA	-27	NA	16176863	16130095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.25	chr16	-	11110	16	NIC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	18	-1	intron_retention	FALSE	canonical	3	945	junction_3	101.210144419091	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATTCTTTCTGATGTG	NA	False	NA	-11	True	AATAAA	-25	NA	16176784	16130097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16164010_16176627
ES.13202.26	chr16	-	3717	18	NNC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	13626	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	356.741141746411	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATTCTTTCTGATGT	NA	False	NA	-12	True	AATAAA	-24	NA	16162771	16130098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16162689
ES.13202.27	chr16	-	4045	20	NIC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	412.408022147123	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATTCTTTCTGATGT	NA	False	NA	-12	True	AATAAA	-24	NA	16176850	16130098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.28	chr16	-	5685	18	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-40	-2	intron_retention	FALSE	canonical	3	332	junction_4	225.894592192923	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATTCTTTCTGATGT	NA	False	NA	-12	True	AATAAA	-24	NA	16176863	16130098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.29	chr16	-	3910	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	332.338345099191	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAATTCTTTCTGATGT	NA	False	NA	-12	True	AATAAA	-24	NA	16176670	16130098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136302_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.3	chr16	-	6245	1	Genic_Genomic	ENSMUSG00000022789.16	novel	NA	NA	NA	NA	2241	3269	mono-exon	FALSE	NA	NA	NA	NA	NA	1155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATATATCAGCTTTGA	NA	False	NA	NA	False	AAAACA	-6	NA	16133069	16126824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_16126800_16133100
ES.13202.30	chr16	-	4038	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	344.315532027772	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAATTCTTTCTGATG	NA	False	NA	-13	True	AATAAA	-23	NA	16176814	16130099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141945_16147660_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.31	chr16	-	4402	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-60	2	intron_retention	FALSE	canonical	3	632	junction_4	191.240629561455	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAATTCTTTCTGATG	NA	False	NA	-13	True	AATAAA	-23	NA	16176883	16130099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.33	chr16	-	6622	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-5	1	intron_retention	FALSE	canonical	3	945	junction_3	106.025056000928	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176828	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.34	chr16	-	3583	14	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	404.535733604973	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176816	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16176627
ES.13202.35	chr16	-	3978	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	157	junction_16	337.763322881181	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176826	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.37	chr16	-	4100	21	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	400.51053669036	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176829	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.38	chr16	-	4164	22	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	446.16737247701	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176815	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16162689_16162768_16163861_16164010_16176627
ES.13202.39	chr16	-	3989	18	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_16	367.38773913272	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAATTCTTTCTGAT	NA	False	NA	-14	True	AATAAA	-22	NA	16176850	16130100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.4	chr16	-	4533	20	NNC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	-39	407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	469.553155888645	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGTGAGATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	16176862	16129686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141661_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.40	chr16	-	8674	16	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	3	0	intron_retention	FALSE	canonical	3	44	junction_15	377.754923491703	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176406	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16164010_16176362
ES.13202.41	chr16	-	6009	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-3	0	intron_retention	FALSE	canonical	3	707	junction_4	152.717007661445	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176826	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.43	chr16	-	4027	19	NNC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	434.548879178237	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176826	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16162689_16162771_16163861_16164010_16176627
ES.13202.45	chr16	-	3946	18	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	372.702967160316	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176834	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141634_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.47	chr16	-	3985	19	FSM	ENSMUSG00000022789.16	ENSMUST00000096229.11	3966	19	-24	5	-3	0	multi-exon	FALSE	canonical	3	21	junction_16	431.23241420576	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176826	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.48	chr16	-	4049	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	343.901696319314	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176824	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156538_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.5	chr16	-	4465	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-3	400	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGTATACTTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	16176826	16129693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.50	chr16	-	4040	19	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	350.108536962927	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176871	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154896_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.52	chr16	-	5759	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-39	0	intron_retention	FALSE	canonical	3	417	junction_4	225.561028942896	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176862	16130101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.53	chr16	-	4520	1	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	688	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16134622	16130102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16130100_16134600
ES.13202.54	chr16	-	4015	19	FSM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	-116	-1748	-22	-1	multi-exon	FALSE	canonical	3	32	junction_17	350.006349148761	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16176845	16130102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.56	chr16	-	7000	17	ISM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	14128	1	14128	-1	intron_retention	FALSE	canonical	3	417	junction_5	254.0666666325	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16162269	16130102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859
ES.13202.58	chr16	-	3663	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	411.859787341597	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGAATTCTTTCTG	NA	False	NA	-16	True	AATAAA	-20	NA	16176421	16130102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.59	chr16	-	6636	17	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_7	305.819538034688	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGTGAATTCTTTCT	NA	False	NA	-17	True	AATAAA	-19	NA	16176826	16130103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16137373_16139447_16139541_16141193_16141284_16141485_16141661_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.6	chr16	-	4410	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	375	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTATATCTTTGCTATT	NA	False	NA	NA	False	NA	NA	NA	16176829	16129718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.61	chr16	-	3889	18	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	413.273010629631	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGTGAATTCTTTCT	NA	False	NA	-17	True	AATAAA	-19	NA	16176746	16130103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134203_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.62	chr16	-	3961	18	NNC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	360.390983377295	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGTGAATTCTTTCT	NA	False	NA	-17	True	AATAAA	-19	NA	16176825	16130103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156601_16159285_16159333_16163861_16164010_16176627
ES.13202.64	chr16	-	3685	15	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	29	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_13	399.459896840313	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGTGAATTCTTTCT	NA	False	NA	-17	True	AATAAA	-19	NA	16176773	16130103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16163861_16164010_16176627
ES.13202.66	chr16	-	3948	18	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	368.150140501884	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176817	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154896_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.67	chr16	-	3812	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-23	3	combination_of_known_junctions	FALSE	canonical	3	44	junction_17	358.200529560137	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176432	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13202.7	chr16	-	4343	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-6	353	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACTAGTTTGACCTCAA	NA	False	NA	NA	False	NA	NA	NA	16176829	16129740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.70	chr16	-	3990	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	349.439798591268	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176836	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16159285_16159333_16163861_16164010_16176627
ES.13202.71	chr16	-	4959	18	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-14	3	intron_retention	FALSE	canonical	3	632	junction_4	166.186600420039	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176837	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.72	chr16	-	4061	20	NNC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	443.154488047914	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176807	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134665_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ES.13202.73	chr16	-	4131	21	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	403.655348038398	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGTAAGTGAATTCTT	NA	False	NA	-20	True	AATAAA	-16	NA	16176824	16130106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16162689_16162771_16163861_16164010_16176627
ES.13202.74	chr16	-	4010	19	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	420.827113998781	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176825	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134193_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147864_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.76	chr16	-	3945	18	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	297.577566870385	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176817	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137300_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.77	chr16	-	4073	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	340.242572748105	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176833	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154896_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.78	chr16	-	3879	19	NNC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	351.431398394876	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176777	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132244_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.79	chr16	-	3144	2	ISM	ENSMUSG00000022789.16	ENSMUST00000230958.2	2913	4	1838	-1	1838	1	3prime_fragment	FALSE	canonical	3	1295	junction_1	0	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16133472	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_16131908_16132127
ES.13202.8	chr16	-	4087	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-84	-52	-84	52	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAATCTACTTCATAA	NA	False	NA	45	True	TATAAA	-18	NA	16176907	16130041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.80	chr16	-	4319	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	11	1	intron_retention	FALSE	canonical	3	32	junction_17	315.976660530489	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176791	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ES.13202.81	chr16	-	3892	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	157	junction_15	355.287537601588	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176826	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
ES.13202.83	chr16	-	4023	20	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	341.569994205914	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176808	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134206_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.84	chr16	-	3918	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_15	402.92151948618	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCAGTAAGTGAATTC	NA	False	NA	-22	True	AATAAA	-14	NA	16176828	16130108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16158859_16158932_16163861_16164010_16176627
ES.13202.9	chr16	-	4189	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-75	52	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAATCTACTTCATAA	NA	False	NA	45	True	TATAAA	-18	NA	16176898	16130041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.90	chr16	-	3784	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-3	-166	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTAGCACTACACACT	NA	False	NA	NA	False	AATAAA	-13	NA	16176805	16130275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.91	chr16	-	3906	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-61	-168	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTAGCACTACACA	NA	False	NA	NA	False	AATAAA	-11	NA	16176884	16130277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.92	chr16	-	3769	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-2	184	-2	-168	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTAGCACTACACA	NA	False	NA	NA	False	AATAAA	-11	NA	16176825	16130277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.93	chr16	-	2896	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	-39	1094	-39	59	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGTCCTATTAGTCTC	NA	False	NA	NA	False	ATTAAA	-29	NA	16176862	16131187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.94	chr16	-	3040	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-77	54	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGCTAGTCCTATTA	NA	False	NA	NA	False	ATTAAA	-24	NA	16176900	16131192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.95	chr16	-	2961	21	NNC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	20	12	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	403.655348038398	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTTCCTGCATTAAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	16176782	16131234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16162689_16162771_16163861_16164010_16176627
ES.13202.96	chr16	-	4893	18	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	-27	5	intron_retention	FALSE	canonical	3	707	junction_4	152.717007661445	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAATGACTTCCTGC	NA	False	NA	NA	False	ATTAAA	-26	NA	16176850	16131241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.97	chr16	-	2875	19	NIC	ENSMUSG00000022789.16	novel	2151	19	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176867	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.98	chr16	-	2881	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176828	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ES.13202.99	chr16	-	2681	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	340.153269738188	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176408	16131246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ES.13203.1	chr16	+	3198	1	Intergenic	novelGene_11069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACGGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	16325351	16328549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16325400_16328500
ES.13204.1	chr16	+	215	1	Intergenic	novelGene_11070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACTAGATTTGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	16362757	16362972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16362800_16363000
ES.13205.1	chr16	-	8459	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-94	-5651	-33	5	multi-exon	TRUE	canonical	2	6	junction_7	4.09219913371771	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTGGCTGTTATTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	16417936	16234775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
ES.13205.2	chr16	-	8317	17	FSM	ENSMUSG00000022788.17	ENSMUST00000069284.14	2637	17	4	-5684	4	-1	multi-exon	FALSE	canonical	2	6	junction_7	4.02919036532155	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGAGCCTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	16345271	16234781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16345112
ES.13205.3	chr16	-	7676	15	NNC	ENSMUSG00000022788.17	novel	2637	17	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.41398416046777	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTGGTTTTGGAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	16345275	16234789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16240685_16241779_16241921_16243630_16243772_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295375_16308286_16308471_16321960_16322081_16345112
ES.13205.4	chr16	-	3618	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-106	-798	-45	798	multi-exon	FALSE	canonical	2	6	junction_7	4.09219913371771	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGTCAGATATAGTG	NA	False	NA	NA	False	AGTAAA	-13	NA	16417948	16239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
ES.13205.5	chr16	-	4487	17	NNC	ENSMUSG00000022788.17	novel	8342	17	NA	NA	-4237	583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	5.00585594578989	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTGCCTGTATATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	16326323	16239843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16324932
ES.13205.6	chr16	-	3545	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	-251	-580	116	580	multi-exon	FALSE	canonical	2	6	junction_7	4.09219913371771	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATTTGCCTGTATAT	NA	False	NA	NA	False	AATAAA	-14	NA	16418093	16239846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
ES.13205.7	chr16	-	174	1	ISM	ENSMUSG00000022788.17	ENSMUST00000162045.8	3171	11	107258	61	51269	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	16270817	16270643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_16270600_16270800
ES.13206.1	chr16	-	199	1	Intergenic	novelGene_11071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTATTG	NA	False	NA	NA	False	NA	NA	NA	16419205	16419006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16419000_16419200
ES.13207.1	chr16	+	180	1	Intergenic	novelGene_11072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCATGAATTTTATTA	NA	False	NA	NA	False	NA	NA	NA	16572886	16573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16572900_16573100
ES.13208.1	chr16	-	2366	11	NNC	ENSMUSG00000022783.12	novel	2416	11	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.44131112314674	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAGCATTAGAATGGT	NA	False	NA	NA	False	AATAAA	-6	NA	16647181	16570889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16571742_16580885_16581032_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610404_16610528_16646883_16646980_16647058
ES.13208.2	chr16	-	201	1	Intergenic	novelGene_11073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTAAGTTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	16605562	16605361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16605400_16605600
ES.13209.1	chr16	-	159	1	Intergenic	novelGene_11074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	16647849	16647690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16647700_16647800
ES.1321.1	chr1	-	185	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGGAAGGGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	132335392	132335207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132335200_132335400
ES.13210.1	chr16	-	222	1	Genic_Genomic	ENSMUSG00000116729.2	novel	NA	NA	NA	NA	-188	-814	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGAAGTATACCCGGTG	NA	False	NA	NA	False	AAAAAG	-15	NA	16667750	16667528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_16667500_16667800
ES.13211.1	chr16	+	3277	21	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-2055	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	157.04504926931	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16686544	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16686636_16688064_16688154_16688481_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.10	chr16	+	7296	13	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	15	junction_10	122.821318951104	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688617	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16708547_16709218_16709421_16710278
ES.13211.11	chr16	+	5740	15	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	287	junction_1	43.3773781915817	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688617	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.12	chr16	+	5192	12	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-4	intron_retention	FALSE	canonical	2	37	junction_5	121.55527940165	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688617	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16702102_16703790_16704468_16704624_16704743_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.13	chr16	+	4231	16	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15	junction_10	110.513226960999	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688618	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.14	chr16	+	4253	16	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	287	junction_1	41.919711619025	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688622	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.15	chr16	+	6092	15	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	383	intron_retention	FALSE	canonical	3	15	junction_9	114.208746403689	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGACATTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	16688622	16711237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.16	chr16	+	2740	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	110.900222610236	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688622	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.17	chr16	+	4817	16	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	2	-3	intron_retention	FALSE	canonical	3	15	junction_11	110.799638988582	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAGAGCCTGGGACC	NA	False	NA	NA	False	ATTAAA	-24	NA	16688622	16710846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.18	chr16	+	6647	13	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-4	intron_retention	FALSE	canonical	3	71	junction_1	123.82006994919	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688623	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.19	chr16	+	2393	15	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	115.876605728258	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688624	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.2	chr16	+	2917	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGACCTTTTACTGGT	NA	False	NA	NA	False	ATTAAA	-34	NA	16688576	16710856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.20	chr16	+	3440	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	71	junction_1	105.458727721299	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688626	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.21	chr16	+	4048	16	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	15	junction_11	110.823864257158	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688626	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.22	chr16	+	2966	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	287	junction_1	40.643985948108	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688627	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.23	chr16	+	3332	17	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	15	junction_12	107.403954186985	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688627	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.24	chr16	+	6425	14	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	287	junction_1	44.1246217946478	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688627	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16703790_16704468_16704624_16704743_16704850_16705440_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.25	chr16	+	2828	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	12	junction_8	138.323976559921	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688627	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.26	chr16	+	3524	12	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_7	168.870188298195	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688628	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704935_16705440_16705588_16705695_16705870_16707346_16708547_16709218_16709421_16710278
ES.13211.27	chr16	+	3504	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	15	junction_11	107.129284482582	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688630	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.28	chr16	+	2657	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	109.578578398107	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688631	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.29	chr16	+	3528	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	-1	intron_retention	FALSE	canonical	3	287	junction_1	40.6139888923755	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688632	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.3	chr16	+	2902	18	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.708508950097	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688578	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698478_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.30	chr16	+	2799	18	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	107.230308683441	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688632	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705494_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.31	chr16	+	3551	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	71	junction_1	108.489180768176	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688632	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.32	chr16	+	4801	15	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-2	intron_retention	FALSE	canonical	1	2	junction_3	117.430678639418	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688633	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.33	chr16	+	4916	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-3	intron_retention	FALSE	canonical	3	71	junction_1	108.549221985927	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAGAGCCTGGGACC	NA	False	NA	NA	False	ATTAAA	-24	NA	16688633	16710846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.34	chr16	+	2779	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	14	junction_7	138.058409984593	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.35	chr16	+	2426	15	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	178.268557439131	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.36	chr16	+	2817	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	104.204118296237	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTGGAACAAAGAGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	16688633	16710839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.37	chr16	+	2890	14	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	3	0	intron_retention	FALSE	canonical	1	7	junction_5	120.250133781864	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688633	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.38	chr16	+	5239	16	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	71	junction_1	111.697727023526	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688633	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16708547_16709218_16709421_16710278
ES.13211.39	chr16	+	5718	12	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	intron_retention	FALSE	canonical	3	287	junction_1	44.07862996776	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16702217_16703698_16703790_16704468_16704624_16704743_16705870_16707346_16709421_16710278
ES.13211.4	chr16	+	2518	16	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_6	146.466226672075	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688582	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.40	chr16	+	3416	17	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-3	intron_retention	FALSE	canonical	1	2	junction_3	110.270388562615	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAGAGCCTGGGACC	NA	False	NA	NA	False	ATTAAA	-24	NA	16688633	16710846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.41	chr16	+	6336	13	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	intron_retention	FALSE	canonical	3	71	junction_1	122.477435563545	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.42	chr16	+	5799	16	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-4	intron_retention	FALSE	canonical	3	71	junction_1	111.558335512064	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688633	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.43	chr16	+	4975	16	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	38	junction_1	115.764243184154	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688633	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445
ES.13211.44	chr16	+	2913	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	138.863564357872	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688633	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.46	chr16	+	2894	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	138.150269321418	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688633	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16709979_16710016_16710278
ES.13211.47	chr16	+	3240	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	382	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGACATTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	16688633	16711236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.48	chr16	+	3169	16	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	15	junction_11	142.266510465394	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688634	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.49	chr16	+	6257	12	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	287	junction_1	47.1030170464274	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688634	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.51	chr16	+	5782	15	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2	junction_3	117.234458958733	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688635	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.52	chr16	+	2574	17	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_6	142.454378662083	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTGGAACAAAGAGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	16688635	16710839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.53	chr16	+	2972	20	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	159.819375192686	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688636	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16709979_16710016_16710278
ES.13211.54	chr16	+	2777	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	109.104594312064	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688639	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.55	chr16	+	2983	19	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.844780884307	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCTCTGGAACAAAGAG	NA	False	NA	NA	False	ATTAAA	-15	NA	16688647	16710837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700408_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.56	chr16	+	3518	18	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_17	141.921270635601	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCTGGAACAAAGAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	16688648	16710838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16709979_16710171_16710278
ES.13211.57	chr16	+	3219	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	3	junction_18	136.017757101467	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688648	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16709979
ES.13211.58	chr16	+	3602	18	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_12	140.092851068194	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGGAACAAAGAGCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	16688648	16710840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705681_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.6	chr16	+	4757	15	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	287	junction_1	42.6463865493231	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688612	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.60	chr16	+	3149	19	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	112.156209957803	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688652	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.61	chr16	+	2910	19	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.545632586769	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688655	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688687_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.62	chr16	+	2979	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	114.03325538339	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688658	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688763_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.66	chr16	+	2704	18	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	164.189442444941	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688666	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16709979_16710016_16710278
ES.13211.67	chr16	+	3478	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_1	117.338890504868	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688666	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688763_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.68	chr16	+	3277	17	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_4	167.845166746022	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688667	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.7	chr16	+	2727	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	110.57122633737	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688614	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16708445_16708547_16709218_16709421_16710278
ES.13211.71	chr16	+	3369	18	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	15	junction_13	142.781222535215	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688677	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.72	chr16	+	3939	16	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	2	junction_1	155.115440881944	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688677	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688763_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16709421_16710278
ES.13211.73	chr16	+	3247	18	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	139.097063518914	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCCTGGGACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	16688684	16710847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688763_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707597_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.74	chr16	+	3018	18	FSM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	55	0	-4	0	multi-exon	FALSE	canonical	3	41	junction_1	94.325542449951	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688699	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.75	chr16	+	5854	15	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_9	144.518217903912	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688703	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.77	chr16	+	2493	15	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	145.676255541428	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688756	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.78	chr16	+	2546	16	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-47	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_6	153.955780087083	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688781	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.79	chr16	+	2945	18	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	159.546242388242	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688806	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.8	chr16	+	3375	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	287	junction_1	39.9538796614296	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688616	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.80	chr16	+	4651	17	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-17	-1	intron_retention	FALSE	canonical	2	6	junction_1	150.374064834997	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688811	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16692932_16693020_16695695_16695881_16696820_16697290_16698467_16698543_16699430_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.81	chr16	+	2945	18	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	134.344055542162	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688848	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704935_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.82	chr16	+	3421	17	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	20	1	intron_retention	FALSE	canonical	1	2	junction_3	138.499421817385	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGGAACAAAGAGCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	16688848	16710840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16695695_16695881_16696820_16696953_16697116_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.83	chr16	+	2939	19	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	141.791807473728	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688850	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709224_16709421_16710278
ES.13211.84	chr16	+	3803	18	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	22	-4	intron_retention	FALSE	canonical	2	6	junction_1	117.183852826752	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAAAGAGCCTGGGAC	NA	False	NA	NA	False	ATTAAA	-23	NA	16688850	16710845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218
ES.13211.85	chr16	+	2590	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_1	145.401813950171	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688857	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.86	chr16	+	2333	3	ISM	ENSMUSG00000022779.17	ENSMUST00000232080.2	1076	9	9872	378	-2834	6	intron_retention	FALSE	canonical	3	419	junction_2	8.5	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGCTTTACAATGCTAG	NA	False	NA	NA	False	NA	NA	NA	16698471	16703335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16698543_16700364_16700562_16701270
ES.13211.87	chr16	+	5259	10	NIC	ENSMUSG00000022779.17	novel	1972	11	NA	NA	-1076	0	intron_retention	FALSE	canonical	3	15	junction_4	133.510252993248	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTGGAACAAAGAGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	16700229	16710839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705721_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.88	chr16	+	5290	8	NIC	ENSMUSG00000022779.17	novel	3511	17	NA	NA	-942	-1	intron_retention	FALSE	canonical	3	415	junction_5	21.8305159941635	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16700363	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16708547_16709218_16709421_16710278
ES.13211.89	chr16	+	2147	13	NNC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	-803	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	121.010416218329	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAAAGAGCCTGGGACC	NA	False	NA	NA	False	ATTAAA	-24	NA	16700502	16710846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705864_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.9	chr16	+	2803	18	NNC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.63333245819	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16688617	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16708040_16708126_16708445_16708547_16709218_16709421_16710278
ES.13211.90	chr16	+	4924	6	NIC	ENSMUSG00000022779.17	novel	1972	11	NA	NA	-550	0	intron_retention	FALSE	canonical	3	414	junction_3	25.4448423064479	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16702662	16710854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16703790_16704468_16704624_16704743_16705870_16707346_16708126_16708445_16708547_16709218
ES.13211.91	chr16	+	4326	5	NIC	ENSMUSG00000022779.17	novel	2908	11	NA	NA	58	-1	intron_retention	FALSE	canonical	3	425	junction_2	22.4429833132763	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	16704831	16710848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16704850_16705440_16705588_16705695_16708126_16708445_16708547_16709218
ES.13211.92	chr16	+	4267	1	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	869	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCTGGAACAAAGAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	16706571	16710838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16706600_16710800
ES.13212.1	chr16	-	638	2	FSM	ENSMUSG00000059305.13	ENSMUST00000075017.5	766	2	128	0	90	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTCTGGCTGGTTTG	NA	False	NA	-1	True	ATTAAA	-14	NA	16686991	16686266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16686843_16686929
ES.13213.1	chr16	+	4836	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	87	-1	-18	1	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGCCACTTGGATCTC	NA	False	NA	36	True	AATAAA	-18	NA	16714419	16745229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.2	chr16	+	4544	7	NIC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.1973083761153	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGTGCCACTTGGA	NA	False	NA	32	True	AATAAA	-14	NA	16714439	16745225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16714489_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.3	chr16	+	4821	8	NNC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.3140771630177	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGTGCCACTTGGA	NA	False	NA	32	True	AATAAA	-14	NA	16714439	16745225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16714489_16721187_16721456_16728802_16728946_16731888_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.4	chr16	+	2269	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	108	2545	3	-2545	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATTTGCAGTATTAAT	NA	False	NA	NA	False	NA	NA	NA	16714440	16742683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.5	chr16	+	4904	9	NNC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.2473446790754	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATTCCTGAGTGCCAC	NA	False	NA	27	True	AATAAA	-9	NA	16714453	16745220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16732682_16732794_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.6	chr16	+	5011	10	NNC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.7349070819117	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGTGCCACTTGG	NA	False	NA	31	True	AATAAA	-13	NA	16714453	16745224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16732475_16732579_16732682_16732794_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.7	chr16	+	4887	8	NNC	ENSMUSG00000026181.14	novel	4922	8	NA	NA	51	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	30.4818447135809	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGTGCCACTTGG	NA	False	NA	31	True	AATAAA	-13	NA	16714488	16745224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16714614_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13213.8	chr16	+	4767	7	ISM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	6852	2	6747	-2	3prime_fragment	FALSE	canonical	3	74	junction_6	6.91415617089718	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTGCCACTTGGAT	NA	False	NA	33	True	AATAAA	-15	NA	16721184	16745226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ES.13214.1	chr16	-	159	1	Intergenic	novelGene_11075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	1480	False	NA	NA	False	NA	NA	NA	16716650	16716491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16716500_16716600
ES.13215.1	chr16	-	175	1	Intergenic	novelGene_11076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGAGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	16781837	16781662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16781700_16781800
ES.13216.10	chr16	+	2640	8	NIC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	23	385	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	219.376388884492	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCCTTTTGTTTTCTT	NA	False	NA	28	True	NA	NA	NA	16801268	16862998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16801604_16833761_16833945_16836149_16836340_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.12	chr16	+	4374	7	NIC	ENSMUSG00000063358.18	novel	1747	8	NA	NA	28	13	intron_retention	FALSE	canonical	3	566	junction_4	33.0336528743374	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAGATTTGAAAGG	NA	False	NA	NA	False	AATAAA	-8	NA	16801273	16856917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16844005_16844221_16844354_16853305_16853416_16856177
ES.13216.13	chr16	+	2810	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	28	530	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.514472385735	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAAGATTCAGTGTTGA	NA	False	NA	34	True	AATAAA	-24	NA	16801273	16863143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801382_16801468_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.14	chr16	+	2248	3	NNC	ENSMUSG00000063358.18	novel	1747	8	NA	NA	28	-6043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	322	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	16801273	16835876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801604_16833761_16834346_16834542
ES.13216.15	chr16	+	4910	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.514472385735	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCTCACTGTGTT	NA	False	NA	14	True	AAAAAG	-30	NA	16801273	16865314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801319_16801476_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.19	chr16	+	2702	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	41	529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.514472385735	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATAAGATTCAGTGTTG	NA	False	NA	33	True	AATAAA	-23	NA	16801286	16863142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801368_16801548_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.2	chr16	+	2952	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	-20	2167	-20	537	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTGTTGATTTTCTC	NA	False	NA	41	True	AATAAA	-31	NA	16801225	16863150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.20	chr16	+	2717	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	41	530	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.514472385735	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAAGATTCAGTGTTGA	NA	False	NA	34	True	AATAAA	-24	NA	16801286	16863143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801382_16801548_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.21	chr16	+	2754	9	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	-22	530	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	211.515919909117	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAAGATTCAGTGTTGA	NA	False	NA	34	True	AATAAA	-24	NA	16801408	16863143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844229_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.22	chr16	+	4669	8	NIC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	90	-38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	219.376388884492	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATTACAAAAAAAA	NA	False	NA	-21	True	NA	NA	NA	16801520	16865279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16801604_16833761_16833945_16836149_16836340_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.23	chr16	+	2298	8	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	32640	2319	-2391	385	3prime_fragment	FALSE	canonical	3	513	junction_7	51.9634879663851	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCCTTTTGTTTTCTT	NA	False	NA	28	True	NA	NA	NA	16833885	16862998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.24	chr16	+	6709	7	NNC	ENSMUSG00000063358.18	novel	1747	8	NA	NA	-104	525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	238.142114433098	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGATAAGATTCAGT	NA	False	NA	29	True	AATAAA	-19	NA	16836172	16863138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16860154_16861046
ES.13216.26	chr16	+	4729	6	NIC	ENSMUSG00000063358.18	novel	2390	9	NA	NA	-23	527	intron_retention	FALSE	canonical	3	119	junction_5	205.822836439497	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGATAAGATTCAGTGT	NA	False	NA	31	True	AATAAA	-21	NA	16836253	16863140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16836340_16841315_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
ES.13216.28	chr16	+	4242	5	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	42642	11	-2	-11	3prime_fragment	FALSE	canonical	3	513	junction_4	63.4916333070744	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATCATTACATTGTCTC	NA	False	NA	6	True	AAAAAG	-22	NA	16843887	16865306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.29	chr16	+	3594	3	ISM	ENSMUSG00000063358.18	ENSMUST00000231821.2	659	4	7634	-1268	-1662	528	3prime_fragment	FALSE	canonical	3	513	junction_2	78.5	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATAAGATTCAGTGTT	NA	False	NA	32	True	AATAAA	-22	NA	16851539	16863141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16853416_16856177_16856304_16861549
ES.13216.3	chr16	+	5178	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	-20	-59	-20	59	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATGCCTTCTGACTGA	NA	False	NA	76	True	NA	NA	NA	16801225	16865376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.30	chr16	+	178	1	Intergenic	novelGene_11081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCTGCAAGCCGGGC	3964	False	NA	NA	False	NA	NA	NA	16874959	16875137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16875000_16875100
ES.13216.4	chr16	+	5007	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	-10	102	-10	-102	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGATGTTGTAAACG	NA	False	NA	-85	True	TATAAA	-30	NA	16801235	16865215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.5	chr16	+	1951	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	-171	-33	14	33	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAATTTTATTCACTAAA	NA	False	NA	NA	False	AATAAA	-28	NA	16801259	16856937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
ES.13216.6	chr16	+	2444	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	21	2634	21	70	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTCGAGCTCTCTTT	NA	False	NA	NA	False	CATAAA	-11	NA	16801266	16862683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ES.13216.7	chr16	+	2933	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	21	12174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	199.514472385735	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACAGCAGCATGAAGTC	NA	False	NA	NA	False	AAAACA	-8	NA	16801266	16877491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549_16863144_16877462
ES.13216.9	chr16	+	5009	10	NNC	ENSMUSG00000063358.18	novel	5099	9	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	199.514472385735	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTCTCACTGTGTTG	NA	False	NA	15	True	AAAAAG	-31	NA	16801266	16865315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549_16862110_16862176
ES.13217.1	chr16	-	1380	9	Intergenic	novelGene_11077	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGAGTGGGAGGAGGGAA	7648	False	NA	NA	False	NA	NA	NA	16861623	16801276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16801603_16833760_16833945_16836147_16836338_16841313_16841431_16843887_16844001_16844214_16844352_16853303_16853414_16856175_16856308_16861552
ES.13217.2	chr16	-	179	1	Intergenic	novelGene_11078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16805887	16805708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16805700_16805900
ES.13217.3	chr16	-	194	1	Intergenic	novelGene_11079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTAGGTAAGCGCAAA	NA	False	NA	NA	False	NA	NA	NA	16834535	16834341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16834300_16834500
ES.13218.1	chr16	-	120	1	Intergenic	novelGene_11080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	16872656	16872536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16872500_16872700
ES.13219.1	chr16	-	262	1	Intergenic	novelGene_11082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGCACAGTGA	NA	False	NA	NA	False	NA	NA	NA	16877833	16877571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16877600_16877800
ES.13219.2	chr16	-	159	1	Intergenic	novelGene_11083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	16877838	16877679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16877700_16877800
ES.1322.1	chr1	+	6242	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-170	210	-170	-210	multi-exon	TRUE	canonical	3	42	junction_10	4.74561200830128	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTGTGCAGTGTGGTT	2755	False	NA	NA	False	NA	NA	NA	132345122	132394486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.10	chr1	+	4920	7	NNC	ENSMUSG00000042046.16	novel	3232	12	NA	NA	6	-225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.0561711201316	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTATACCCTCCTTTC	2931	False	NA	NA	False	AATAAA	-35	NA	132345298	132394471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383008_132391269
ES.1322.11	chr1	+	2178	7	ISM	ENSMUSG00000042046.16	ENSMUST00000188389.2	3232	12	-9	7878	-9	-1425	5prime_fragment	FALSE	canonical	3	46	junction_6	3.71558280160133	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGACTGCATGATT	2965	False	NA	NA	False	AATACA	-14	NA	132345332	132383952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597
ES.1322.12	chr1	+	3076	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	43	3163	-6	-297	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGTCTGCTCGCTGTG	2968	False	NA	NA	False	NA	NA	NA	132345335	132391533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.13	chr1	+	6690	11	NIC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	28	-237	intron_retention	FALSE	canonical	3	42	junction_8	4.8425200051213	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCAATTTTAGCCGCTA	3002	False	NA	NA	False	AATAAA	-23	NA	132345369	132394459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.14	chr1	+	8069	10	NIC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	98	-233	intron_retention	FALSE	canonical	3	44	junction_9	4.371625682868	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTTAGCCGCTATACC	3072	False	NA	NA	False	AATAAA	-27	NA	132345439	132394463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132384740_132386054_132387729_132390650_132390786_132391061
ES.1322.15	chr1	+	5082	14	NNC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	214	-1026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0859224734592	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAAGGTCAAAGGGGT	3188	False	NA	NA	False	NA	NA	NA	132345555	132393670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132345609_132346602_132346692_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.16	chr1	+	180	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTGGAGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	132359148	132359328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132359100_132359300
ES.1322.17	chr1	+	5742	10	NIC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	254	-236	intron_retention	FALSE	canonical	3	42	junction_7	4.88636298384356	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAATTTTAGCCGCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	132377389	132394460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132377714_132380824_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.18	chr1	+	5476	7	NIC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	-824	-236	intron_retention	FALSE	canonical	3	42	junction_4	5.3748384988657	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAATTTTAGCCGCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	132381488	132394460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132381883_132382969_132383147_132383597_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.19	chr1	+	4170	7	ISM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	38303	251	1283	-251	3prime_fragment	FALSE	canonical	3	42	junction_4	3.77123616632825	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATTTACTCGACACC	NA	False	NA	NA	False	AATAAA	-9	NA	132383595	132394445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.2	chr1	+	4754	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-140	1668	-140	1198	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTGTATATCACTTG	2785	False	NA	NA	False	GATAAA	-15	NA	132345152	132393028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.20	chr1	+	2975	4	ISM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	40760	1026	3740	-1026	3prime_fragment	FALSE	canonical	3	42	junction_1	1.24721912892465	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAAGGTCAAAGGGGT	NA	False	NA	NA	False	NA	NA	NA	132386052	132393670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.3	chr1	+	3661	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-139	2760	-139	106	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGCTTGAGCATCTA	2786	False	NA	NA	False	AATAAA	-14	NA	132345153	132391936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.4	chr1	+	6419	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-137	0	-137	0	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCCTGTTTGGCTT	2788	False	NA	12	True	AATAAA	-17	NA	132345155	132394696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.5	chr1	+	7633	14	NNC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	-136	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.2824648423034	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTGCCTGTTTGGCTTCC	2789	False	NA	14	True	AATAAA	-19	NA	132345156	132394698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132345609_132361836_132362226_132377049_132377714_132379278_132380477_132380809_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.6	chr1	+	5703	13	NNC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	-118	-229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.3263064170621	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGCCGCTATACCCTCC	2807	False	NA	NA	False	AATAAA	-31	NA	132345174	132394467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132345609_132361836_132362226_132377517_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.7	chr1	+	5258	7	NNC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.0561711201316	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCCTGTTTGGCTT	2818	False	NA	12	True	AATAAA	-17	NA	132345185	132394696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383008_132391269
ES.1322.8	chr1	+	5354	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	-98	1026	-98	-1026	multi-exon	FALSE	canonical	3	42	junction_10	4.74561200830128	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAAGGTCAAAGGGGT	2827	False	NA	NA	False	NA	NA	NA	132345194	132393670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.1322.9	chr1	+	7596	13	NIC	ENSMUSG00000042046.16	novel	6282	13	NA	NA	-4	-236	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	14.3643076176102	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAATTTTAGCCGCTAT	2921	False	NA	NA	False	AATAAA	-24	NA	132345288	132394460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132345609_132361836_132362226_132377049_132377714_132379278_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ES.13220.1	chr16	+	2212	4	FSM	ENSMUSG00000022773.20	ENSMUST00000231518.2	2185	4	-25	-2	-25	2	multi-exon	FALSE	canonical	3	5	junction_1	19.6694913225759	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTTTGCGTTGGCCT	NA	False	NA	NA	False	TATAAA	-22	NA	16887996	16904207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16899461_16899506_16899931_16900041_16902379
ES.13220.10	chr16	+	2750	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	572	0	-36	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCTTTACTGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	16888131	16904600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.11	chr16	+	158	1	Intergenic	novelGene_11084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATAATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	16890443	16890601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16890400_16890600
ES.13220.12	chr16	+	162	2	Antisense	novelGene_ENSMUSG00000055497.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAAGAAGATAAAAT	845	False	NA	NA	False	NA	NA	NA	16897422	16933649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_16897440_16933504
ES.13220.13	chr16	+	170	1	Intergenic	novelGene_11085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGAAGAAACTTGG	1905	False	NA	NA	False	NA	NA	NA	16898482	16898652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16898500_16898700
ES.13220.14	chr16	+	180	1	Intergenic	novelGene_11086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	16924487	16924667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16924500_16924700
ES.13220.15	chr16	+	167	1	Intergenic	novelGene_11088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAGATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	16933484	16933651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16933500_16933700
ES.13220.2	chr16	+	770	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	448	2104	-14	30	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGAAAGCTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	16888007	16902496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.3	chr16	+	997	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	448	1877	-14	257	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCTAGTGAATACTTT	NA	False	NA	NA	False	NA	NA	NA	16888007	16902723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.4	chr16	+	3184	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	449	-311	-13	2	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGTTCCCAGGGTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	16888008	16904911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.5	chr16	+	1059	6	NNC	ENSMUSG00000022773.20	novel	1082	6	NA	NA	6	257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6750964716801	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCTAGTGAATACTTT	NA	False	NA	NA	False	NA	NA	NA	16888027	16902723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16888228_16888836_16888919_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.6	chr16	+	3568	6	NIC	ENSMUSG00000022773.20	novel	694	5	NA	NA	10	283	intron_retention	FALSE	canonical	0	0	junction_3	21.8942914934464	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCTGCCTCTTTTGTTT	NA	False	NA	NA	False	TTTAAA	-33	NA	16888031	16905192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16888228_16892490_16892617_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.7	chr16	+	3370	7	NNC	ENSMUSG00000022773.20	novel	694	5	NA	NA	10	3	intron_retention	FALSE	canonical	0	0	junction_2	21.6256021110781	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGTTCCCAGGGTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	16888031	16904912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_16888228_16888836_16888919_16892490_16892617_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.8	chr16	+	962	6	NIC	ENSMUSG00000022773.20	novel	694	5	NA	NA	1	182	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	21.8942914934464	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGTTTTTGGAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	16888093	16902648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_16888228_16892490_16892617_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13220.9	chr16	+	2448	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	534	340	1	55	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCTTCAGGGTAAGTG	NA	False	NA	NA	False	TATAAA	-19	NA	16888093	16904260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ES.13221.1	chr16	-	4861	21	Fusion	ENSMUSG00000022771.18_ENSMUSG00000055497.6	novel	3088	20	NA	NA	1	1883	intron_retention	FALSE	canonical	3	6	junction_1	167.198415064258	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTAAAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	16929095	16897979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_16901193_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.10	chr16	-	2305	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	25	3	0	-2	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCGTTCATGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	16929096	16904421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.11	chr16	-	2211	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	2	120	2	-119	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929119	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.12	chr16	-	4826	18	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-119	intron_retention	FALSE	canonical	2	9	junction_6	229.134296759689	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929106	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909295_16909516_16909719_16909754_16910078_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.13	chr16	-	4409	17	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	8	-119	intron_retention	FALSE	canonical	3	214	junction_1	135.236829303263	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929088	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.14	chr16	-	2172	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	199.417119375444	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929105	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907033_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.15	chr16	-	2293	22	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	241.11002748014	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929095	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16925535_16925642_16927508_16927559_16929006
ES.13221.16	chr16	-	2661	8	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-1552	-119	intron_retention	FALSE	canonical	0	0	junction_5	302.56508829186	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16910933	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907856_16907965_16908023_16909038_16909157_16909719
ES.13221.17	chr16	-	2168	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-119	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	167.824990689706	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929105	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906637_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.18	chr16	-	2406	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-119	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	198.432734194739	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929095	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925308_16927508_16927559_16929006
ES.13221.19	chr16	-	3159	20	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-119	intron_retention	FALSE	canonical	3	214	junction_1	127.661515751138	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929106	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.2	chr16	-	2565	21	Fusion	ENSMUSG00000022771.18_ENSMUSG00000055497.6	novel	3088	20	NA	NA	0	-414	multi-exon	FALSE	canonical	3	6	junction_1	167.198415064258	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTCTGTGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	16929096	16900276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_16901193_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.20	chr16	-	2277	22	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-2	-119	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_14	237.369493920324	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929098	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16914759_16914847_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.21	chr16	-	2150	20	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	202.283076932541	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929079	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16910065_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.22	chr16	-	3718	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	11	-641	1	-119	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929095	16904538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.23	chr16	-	2814	20	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-127	intron_retention	FALSE	canonical	3	214	junction_1	127.228370152829	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929106	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.24	chr16	-	2186	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-4	-127	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	198.160944688907	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929083	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907165_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.25	chr16	-	2789	19	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-127	intron_retention	FALSE	canonical	3	214	junction_1	130.688454816109	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929106	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.26	chr16	-	2938	6	NIC	ENSMUSG00000022771.18	novel	1395	17	NA	NA	-366	-127	intron_retention	FALSE	canonical	3	691	junction_3	50.3769788693209	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16909747	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719
ES.13221.27	chr16	-	3361	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-127	intron_retention	FALSE	canonical	2	9	junction_8	233.851849468846	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929096	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909295_16909516_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.28	chr16	-	2090	21	FSM	ENSMUSG00000022771.18	ENSMUST00000164458.10	2190	21	-27	127	2	-127	multi-exon	FALSE	canonical	2	8	junction_1	166.780814244325	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929104	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16904980_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.29	chr16	-	2726	18	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-127	intron_retention	FALSE	canonical	0	0	junction_14	215.409339145274	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16929095	16904546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.3	chr16	-	2514	20	Fusion	ENSMUSG00000022771.18_ENSMUSG00000055497.6	novel	3088	20	NA	NA	1	-414	multi-exon	FALSE	canonical	3	6	junction_1	228.494724961387	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTCTGTGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	16929095	16900276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_16901193_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
ES.13221.30	chr16	-	2448	20	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-8	-128	intron_retention	FALSE	canonical	3	214	junction_1	127.667330858059	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATCTCATTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	16929087	16904547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.31	chr16	-	2140	20	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	254.34971671569	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATCTCATTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	16929105	16904547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910074_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.32	chr16	-	5433	13	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	2663	-129	intron_retention	FALSE	canonical	3	214	junction_1	152.903019372847	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAAATCTCATTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	16926397	16904548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16908023_16909038_16909157_16909719_16910951_16912746_16912908_16913868_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042
ES.13221.36	chr16	-	2402	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	12	674	2	616	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTAGCTTTTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	16929094	16905853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.37	chr16	-	2127	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	23	938	-4	352	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGTCGCCTACCTT	NA	False	NA	NA	False	NA	NA	NA	16929083	16906117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.38	chr16	-	3975	16	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	4	intron_retention	FALSE	canonical	3	631	junction_7	51.5116383828828	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGCCGTGGTCTCTGC	NA	False	NA	0	True	NA	NA	NA	16929095	16906465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910951_16912746_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.39	chr16	-	1810	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	-9	1287	6	3	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGCCGTGGTCTCTG	NA	False	NA	-1	True	NA	NA	NA	16929115	16906466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.4	chr16	-	3522	20	Fusion	ENSMUSG00000022771.18_ENSMUSG00000055497.6	novel	3088	20	NA	NA	0	-418	intron_retention	FALSE	canonical	3	6	junction_1	171.540777155599	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTTGTGTTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	16929096	16900280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_16901193_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.40	chr16	-	4220	19	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	3	intron_retention	FALSE	canonical	3	631	junction_7	50.432359051567	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGCCGTGGTCTCTG	NA	False	NA	-1	True	NA	NA	NA	16929105	16906466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16927559_16929006
ES.13221.41	chr16	-	1748	19	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	172.831083238326	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGGTGCCGTGGTCTC	NA	False	NA	-3	True	NA	NA	NA	16929105	16906468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
ES.13221.42	chr16	-	5700	16	NNC	ENSMUSG00000022771.18	novel	1395	17	NA	NA	0	1	intron_retention	FALSE	canonical	2	9	junction_7	242.746140832123	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGGTGCCGTGGTCTC	NA	False	NA	-3	True	NA	NA	NA	16929106	16906468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909295_16909516_16909719_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.43	chr16	-	3705	18	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	-2	6	intron_retention	FALSE	canonical	0	0	junction_4	306.24827659991	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGTTTGAGCCCCTGG	NA	False	NA	-29	True	AATAAA	-19	NA	16929081	16906508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907856_16907965_16908023_16909038_16909157_16909295_16909457_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
ES.13221.44	chr16	-	3891	17	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	2	intron_retention	FALSE	canonical	3	631	junction_7	52.4678472971781	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCCAGTTTGAGCCC	NA	False	NA	-33	True	AATAAA	-15	NA	16929096	16906512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.45	chr16	-	5309	14	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_1	342.935603870999	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTCCAGTTTGAGCCC	NA	False	NA	-33	True	AATAAA	-15	NA	16929076	16906512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16906884_16907146_16907291_16907355_16907444_16909157_16909295_16909457_16909719_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16929006
ES.13221.46	chr16	-	4441	18	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	1	intron_retention	FALSE	canonical	3	631	junction_6	51.287034049472	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGTCCAGTTTGAGCC	NA	False	NA	-34	True	AATAAA	-14	NA	16929095	16906513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16927559_16929006
ES.13221.47	chr16	-	2351	18	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	631	junction_7	49.4010492582907	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGGGTCCAGTTTGAG	NA	False	NA	-36	True	AATAAA	-12	NA	16929106	16906515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.48	chr16	-	1528	18	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	241.394263211491	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929082	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.5	chr16	-	3500	18	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-6	0	intron_retention	FALSE	canonical	1	4	junction_11	214.409690944543	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTCATGACCTGGTA	NA	False	NA	NA	False	AATAAA	-19	NA	16929112	16904418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914852_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.50	chr16	-	2223	20	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	232.331480642437	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929112	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921192_16921492_16923856_16923920_16925042_16925308_16927508_16927559_16929006
ES.13221.51	chr16	-	3593	17	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	2	-2	intron_retention	FALSE	canonical	2	26	junction_10	180.694104427898	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929094	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16910656_16910874_16910951_16912746_16913945_16914568_16914847_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.52	chr16	-	1716	20	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.823865952186	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929079	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906723_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.53	chr16	-	2515	21	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	256.278847156764	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929093	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909295_16909516_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925646_16927508_16927559_16929006
ES.13221.55	chr16	-	1865	20	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.823865952186	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929096	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16906884_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.56	chr16	-	3150	18	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-2	intron_retention	FALSE	canonical	3	631	junction_6	49.5497373412638	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTGGGTCCAGTTTGA	NA	False	NA	-37	True	AATAAA	-11	NA	16929096	16906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.58	chr16	-	2154	20	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_6	152.730204070633	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACCTGGGTCCAGTTTG	NA	False	NA	-38	True	AATAAA	-10	NA	16929086	16906517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909295_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.59	chr16	-	5193	19	NNC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_13	236.42505272402	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACCTGGGTCCAGTTTG	NA	False	NA	-38	True	AATAAA	-10	NA	16929095	16906517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16916746_16916820_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16927559_16929006
ES.13221.6	chr16	-	2083	17	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	214.146115056403	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCGTTCATGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	16929085	16904421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16929006
ES.13221.60	chr16	-	1525	16	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	186.479549072337	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACCTGGGTCCAGTTT	NA	False	NA	-39	True	AATAAA	-9	NA	16929093	16906518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16929006
ES.13221.61	chr16	-	1675	19	NIC	ENSMUSG00000022771.18	novel	3088	20	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	175.875841798682	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACCTGGGTCCAGTTT	NA	False	NA	-39	True	AATAAA	-9	NA	16929095	16906518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16925042_16925089_16927508_16927559_16929006
ES.13221.62	chr16	-	2673	1	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	291	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAACAACAACAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	16929095	16926422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16926400_16929100
ES.13221.63	chr16	-	1210	2	FSM	ENSMUSG00000022771.18	ENSMUST00000231536.2	935	2	-9	-266	1	266	multi-exon	FALSE	canonical	3	776	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16929105	16926447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16927559_16929006
ES.13221.7	chr16	-	2368	21	NNC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	282.622610560443	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCGTTCATGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	16929105	16904421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16923856_16923920_16925042_16925089_16925535_16925642_16927508_16927559_16929006
ES.13221.8	chr16	-	4313	17	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	0	-2	intron_retention	FALSE	canonical	3	214	junction_1	138.45451362722	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCGTTCATGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	16929096	16904421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16908023_16909038_16909157_16909719_16909754_16910078_16910951_16912746_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ES.13221.9	chr16	-	4733	20	NIC	ENSMUSG00000022771.18	novel	2333	21	NA	NA	2	-2	intron_retention	FALSE	canonical	3	214	junction_1	127.447822140753	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCGTTCATGACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	16929104	16904421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16927559_16929006
ES.13222.1	chr16	-	1359	6	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	6	junction_5	117.757377688194	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943003	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942865
ES.13222.10	chr16	-	1384	6	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	255	junction_4	29.3011945148999	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943016	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942853
ES.13222.11	chr16	-	4239	4	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	267	junction_3	24.0554914035583	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943001	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16939416_16942853
ES.13222.13	chr16	-	1510	7	NIC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	35	junction_6	123.380734134449	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16942999	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16941375_16941519_16942853
ES.13222.14	chr16	-	907	6	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	131.506045488411	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943001	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16938819_16938944_16939159_16939416_16942878
ES.13222.15	chr16	-	2426	5	ISM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	2350	1	-996	0	intron_retention	FALSE	canonical	3	255	junction_4	30.7520324531567	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16940620	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819
ES.13222.16	chr16	-	3865	4	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	689	-1	intron_retention	FALSE	canonical	2	3	junction_3	138.689100749362	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTTGTATGTCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	16942281	16931263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16938819
ES.13222.17	chr16	-	1137	7	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	108.797594948908	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGTTGTATGTCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	16942999	16931264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942865
ES.13222.19	chr16	-	2720	1	Intergenic	novelGene_11087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATGGCCTTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	16934842	16932122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16932100_16934800
ES.13222.3	chr16	-	1342	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	-77	1	-16	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943047	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
ES.13222.4	chr16	-	4021	5	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	5	0	intron_retention	FALSE	canonical	3	267	junction_4	20.9448681065315	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16942999	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16938944_16939159_16939416_16942853
ES.13222.5	chr16	-	1173	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	-17	0	10	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943021	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
ES.13222.6	chr16	-	932	6	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	113.851833538156	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943001	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16938819_16938944_16939159_16939416_16942853
ES.13222.7	chr16	-	1198	1	NIC	ENSMUSG00000049916.13	novel	1266	8	NA	NA	3180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16932460	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_16931300_16932500
ES.13222.8	chr16	-	1126	7	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_6	94.3705756873166	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16942999	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942878
ES.13222.9	chr16	-	1359	6	NNC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	46	junction_5	102.268274650548	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943016	16931262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942878
ES.13223.1	chr16	-	1085	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	22	1	22	-1	multi-exon	FALSE	canonical	2	125	junction_1	37.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAGTGCATGAGATGT	NA	False	NA	-11	True	AATAAA	-17	NA	16950225	16948002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16948653_16949460_16949658_16949987
ES.13223.3	chr16	-	828	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	25	255	25	-255	multi-exon	FALSE	canonical	2	125	junction_1	37.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTTGCTGTAACCC	NA	False	NA	-3	True	ATTAAA	-15	NA	16950222	16948256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16948653_16949460_16949658_16949987
ES.13224.1	chr16	+	1366	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-65	-4	-17	4	multi-exon	TRUE	canonical	3	70	junction_3	15.4171171105366	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTTATAAAGTGTCCA	NA	False	NA	16	True	AATAAA	-20	NA	16964777	16966714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
ES.13224.2	chr16	+	1628	3	FSM	ENSMUSG00000041774.17	ENSMUST00000232344.2	1580	3	-46	-2	-1	2	multi-exon	FALSE	canonical	3	101	junction_2	5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGTTTATAAAGTGTC	NA	False	NA	14	True	AATAAA	-18	NA	16964793	16966712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_16965011_16965096_16965257_16965461
ES.13224.3	chr16	+	1504	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-27	1	3	-1	intron_retention	FALSE	canonical	3	70	junction_3	17.4547032821147	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGGTTTATAAAGT	NA	False	NA	11	True	AATAAA	-15	NA	16964815	16966709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
ES.13225.1	chr16	-	6555	4	NNC	ENSMUSG00000022768.18	novel	4210	4	NA	NA	-492	-3	intron_retention	FALSE	canonical	1	1	junction_2	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGTGCTGGTG	NA	False	NA	NA	False	AATAAA	-16	NA	16965585	16956930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16960067_16960194_16960744_16961874_16962013_16962853
ES.13225.3	chr16	-	5223	5	NNC	ENSMUSG00000022768.18	novel	4210	4	NA	NA	-493	-8	intron_retention	FALSE	canonical	0	0	junction_4	1.08972473588517	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACAGCTGTCTGGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	16965586	16956935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16960067_16960194_16960744_16961874_16962013_16962853_16963382_16964709
ES.13225.4	chr16	-	4448	4	NNC	ENSMUSG00000022768.18	novel	4210	4	NA	NA	-354	0	intron_retention	FALSE	canonical	1	1	junction_2	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	16965447	16958899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16960067_16960194_16960744_16961874_16962013_16962853
ES.13225.5	chr16	-	5428	3	FSM	ENSMUSG00000022768.18	ENSMUST00000115711.10	2103	3	-3325	0	-493	0	multi-exon	FALSE	canonical	1	1	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	16965586	16958899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16960067_16960194_16960744_16961874
ES.13226.1	chr16	+	156	1	Intergenic	novelGene_11090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	16997911	16998067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_16997900_16998100
ES.13227.1	chr16	+	3955	1	Intergenic	novelGene_11091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAATAAAAACAACAAAC	NA	False	NA	NA	False	NA	NA	NA	17011418	17015373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17011400_17015400
ES.13227.2	chr16	+	182	1	Intergenic	novelGene_11092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCCAAAATCTGCCG	NA	False	NA	NA	False	NA	NA	NA	17012771	17012953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17012800_17013000
ES.13228.1	chr16	+	4633	1	FSM	ENSMUSG00000071636.9	ENSMUST00000169803.5	5380	1	747	0	747	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCGGGAGTTAAAGCATG	791	False	NA	NA	False	ATTAAA	-20	NA	17027213	17031846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17027200_17031800
ES.13229.1	chr16	+	6404	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	-579	0	intron_retention	FALSE	canonical	0	0	junction_1	40	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	5732	False	NA	17	True	ATTAAA	-19	NA	17050856	17081294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17051066_17072831_17072931_17075198
ES.13229.10	chr16	+	2741	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	3	3610	3	-1775	multi-exon	FALSE	canonical	3	75	junction_1	2.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAATATTTTCCTCCTG	6314	False	NA	NA	False	TTTAAA	-22	NA	17051438	17077684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17051595_17072831_17072931_17075198
ES.13229.11	chr16	+	4481	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	1143	18	intron_retention	FALSE	canonical	0	0	junction_1	40	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCATACCCAAATTCACAA	7546	False	NA	NA	False	NA	NA	NA	17052670	17079477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17052774_17072831_17072931_17075198
ES.13229.12	chr16	+	8102	1	Intergenic	novelGene_11096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTCTATGTATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	17056631	17064733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17056600_17064700
ES.13229.13	chr16	+	6322	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19443	0	intron_retention	FALSE	canonical	3	13	junction_1	33.5	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	627	False	NA	17	True	ATTAAA	-19	NA	17070970	17081294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17071098_17072831_17072931_17075198
ES.13229.14	chr16	+	6636	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19470	-8	intron_retention	FALSE	canonical	0	0	junction_1	40	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATGTGGAGTCTGT	654	False	NA	9	True	ATTAAA	-11	NA	17070997	17081286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17071447_17072831_17072931_17075198
ES.13229.15	chr16	+	4491	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19470	31	intron_retention	FALSE	canonical	3	13	junction_1	33.5	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAAAACCTATTTTTTA	654	False	NA	NA	False	NA	NA	NA	17070997	17079490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17071098_17072831_17072931_17075198
ES.13229.16	chr16	+	2685	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19470	-1775	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	33.5	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAATATTTTCCTCCTG	654	False	NA	NA	False	TTTAAA	-22	NA	17070997	17077684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17071098_17072831_17072931_17075198
ES.13229.17	chr16	+	2802	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	20862	-1772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATATTTTCCTCCTGCCT	2046	False	NA	NA	False	TTTAAA	-25	NA	17072389	17077687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17072604_17072831_17072931_17075198
ES.13229.18	chr16	+	6090	1	NIC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	23670	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTGGAGTCTGTG	4854	False	NA	10	True	ATTAAA	-12	NA	17075197	17081287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17075200_17081300
ES.13229.19	chr16	+	3395	9	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1631	10	NA	NA	-18529	-1	intron_retention	FALSE	canonical	1	1	junction_1	87.3977080649144	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	5068	False	NA	37	True	AATAAA	-22	NA	17075411	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17076938_17093929_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.2	chr16	+	4608	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	-58	1804	-58	31	multi-exon	FALSE	canonical	3	75	junction_1	2.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAAAACCTATTTTTTA	6253	False	NA	NA	False	NA	NA	NA	17051377	17079490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17051595_17072831_17072931_17075198
ES.13229.20	chr16	+	2876	8	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1627	8	NA	NA	-18182	-7	intron_retention	FALSE	canonical	1	1	junction_1	105.760414646135	512	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	5415	False	NA	4	True	AATAAA	-15	NA	17075758	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17076938_17093929_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17100678
ES.13229.21	chr16	+	3611	1	ISM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	24545	1703	24453	132	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTATACAGTTTCAGAC	5637	False	NA	NA	False	AATATA	-20	NA	17075980	17079591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17076000_17079600
ES.13229.22	chr16	+	159	1	Intergenic	novelGene_11100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	17089278	17089437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17089300_17089400
ES.13229.23	chr16	+	1539	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-115	-7	intron_retention	FALSE	canonical	3	40	junction_6	82.2464116069645	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094057	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
ES.13229.24	chr16	+	1514	7	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-108	-7	intron_retention	FALSE	canonical	3	40	junction_6	103.866902010859	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094064	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17100678
ES.13229.25	chr16	+	1456	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	175	0	-57	0	multi-exon	FALSE	canonical	3	122	junction_4	58.6725586266908	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094115	17096525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.26	chr16	+	2060	4	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	271	junction_1	3.85861230093008	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094128	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095756_17095835
ES.13229.27	chr16	+	1385	8	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-37	-4	intron_retention	FALSE	canonical	3	40	junction_7	76.8576739227536	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGGTCTCTTCTTTGGG	NA	False	NA	7	True	AATAAA	-18	NA	17094135	17101089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17100678
ES.13229.28	chr16	+	1616	8	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-26	-1	intron_retention	FALSE	canonical	2	12	junction_1	90.3001796730194	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094146	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094262_17094497_17094622_17094700_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.29	chr16	+	1405	10	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	80.0083328993508	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGGGGTTTCATCC	NA	False	NA	39	True	AATAAA	-24	NA	17094149	17096526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
ES.13229.3	chr16	+	3841	12	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1631	10	NA	NA	-48	0	intron_retention	TRUE	canonical	1	1	junction_3	91.482103203914	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	6263	False	NA	38	True	AATAAA	-23	NA	17051387	17096525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17051595_17072831_17072931_17075198_17076938_17093929_17094333_17094497_17094622_17094700_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.30	chr16	+	1559	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-23	-4	intron_retention	FALSE	canonical	3	40	junction_5	89.2712719748072	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGGTCTCTTCTTTGGG	NA	False	NA	7	True	AATAAA	-18	NA	17094149	17101089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17100678
ES.13229.31	chr16	+	1569	8	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-21	-1	intron_retention	FALSE	canonical	0	0	junction_2	92.9792603602699	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094151	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17094544_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.32	chr16	+	1629	8	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-20	0	intron_retention	FALSE	canonical	3	43	junction_6	79.2678229491768	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094152	17096525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
ES.13229.33	chr16	+	1956	5	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-14	1	intron_retention	FALSE	canonical	3	265	junction_3	5.35607132140714	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGGGGTTTCATCC	NA	False	NA	39	True	AATAAA	-24	NA	17094158	17096526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17095835
ES.13229.34	chr16	+	1781	7	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_1	97.5319036122141	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATAGGTGTGTGGGGTT	NA	False	NA	33	True	AATAAA	-18	NA	17094159	17096520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094460_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.35	chr16	+	1752	6	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	2	12	junction_1	101.467236091262	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATAGGTGTGTGGGGTT	NA	False	NA	33	True	AATAAA	-18	NA	17094159	17096520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094262_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.37	chr16	+	1697	7	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	43	junction_5	83.8351557124655	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094163	17096525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
ES.13229.38	chr16	+	1823	6	ISM	ENSMUSG00000055692.22	ENSMUST00000232092.2	1627	8	-9	2	-9	2	intron_retention	FALSE	canonical	3	181	junction_2	35.1454122183821	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTGTGGGGTTTCA	NA	False	NA	36	True	AATAAA	-21	NA	17094163	17096523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532
ES.13229.39	chr16	+	1748	7	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	132	junction_2	51.6701611721461	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094164	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.4	chr16	+	6393	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	-39	0	-39	0	multi-exon	FALSE	canonical	3	75	junction_1	2.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	6272	False	NA	17	True	ATTAAA	-19	NA	17051396	17081294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17051595_17072831_17072931_17075198
ES.13229.40	chr16	+	2280	2	Fusion	ENSMUSG00000055692.22_ENSMUSG00000116743.2	novel	825	4	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	280	junction_1	0	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094164	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17095756_17095835
ES.13229.41	chr16	+	1840	6	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	186	junction_4	34.83102065688	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGGGGTTTCATCC	NA	False	NA	39	True	AATAAA	-24	NA	17094165	17096526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.42	chr16	+	1114	9	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-7	-7	intron_retention	FALSE	canonical	2	12	junction_1	98.4846910692215	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094165	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094262_17094497_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17100678
ES.13229.43	chr16	+	1321	9	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	85.6007264864031	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATAGGTGTGTGGGGT	NA	False	NA	32	True	AATAAA	-17	NA	17094166	17096519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094622_17094700_17094752_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.44	chr16	+	1302	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	181	junction_2	42.0898509804389	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTCCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	17094167	17096069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.45	chr16	+	1755	4	NIC	ENSMUSG00000055692.22	novel	1721	7	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	40	junction_3	107.508139226758	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094167	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095457_17095532_17095756_17100678
ES.13229.47	chr16	+	2065	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-5	245	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGGAATGGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	17094167	17096770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.48	chr16	+	6589	4	NIC	ENSMUSG00000055692.22	novel	830	6	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	265	junction_3	3.39934634239519	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGGGTCTCTTCTTTGG	NA	False	NA	6	True	AATAAA	-17	NA	17094167	17101088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532
ES.13229.49	chr16	+	1250	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	186	junction_5	33.1331488928468	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTCCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	17094172	17096069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.5	chr16	+	3569	11	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1631	10	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	1	junction_3	103.180860628316	513	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	6309	False	NA	4	True	AATAAA	-15	NA	17051433	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17051595_17072831_17072931_17075198_17076938_17093929_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17100678
ES.13229.50	chr16	+	6502	5	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	-7	intron_retention	FALSE	canonical	3	265	junction_3	5.35607132140714	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094172	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17095835
ES.13229.51	chr16	+	1780	6	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	122	junction_2	60.2906294543356	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATAGGTGTGTGGGGTT	NA	False	NA	33	True	AATAAA	-18	NA	17094174	17096520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094904_17095057_17095115_17095205_17095457_17095532_17095756_17095835
ES.13229.52	chr16	+	1705	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	181	junction_2	34.7754702819866	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGGGGTTTCATCC	NA	False	NA	39	True	AATAAA	-24	NA	17094204	17096526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.53	chr16	+	1284	10	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.8221837374155	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTGTGGGGTTTCA	NA	False	NA	36	True	AATAAA	-21	NA	17094207	17096523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17094544_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.54	chr16	+	1859	5	NIC	ENSMUSG00000055692.22	novel	739	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	230	junction_3	17.4266319178434	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094207	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532
ES.13229.55	chr16	+	5509	7	NNC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	1	junction_6	99.243807531419	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGGTCTCTTCTTTGGG	NA	False	NA	7	True	AATAAA	-18	NA	17094209	17101089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835_17099846_17100678
ES.13229.56	chr16	+	6342	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTCTCTTCTTTGGGA	NA	False	NA	8	True	AATAAA	-19	NA	17094210	17101090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.57	chr16	+	1415	7	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	2	-10	intron_retention	FALSE	canonical	3	40	junction_6	87.2724024089072	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATAAGGGTCTCTTC	NA	False	NA	1	True	AATAAA	-12	NA	17094213	17101083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094752_17094825_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17100678
ES.13229.58	chr16	+	1545	8	NIC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	122	junction_3	63.6142712777886	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	NA	False	NA	37	True	AATAAA	-22	NA	17094213	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17094333_17094497_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.59	chr16	+	1147	3	NIC	ENSMUSG00000055692.22	novel	781	7	NA	NA	-19	-7	intron_retention	FALSE	canonical	3	40	junction_2	116.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17094925	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17095115_17095205_17095756_17100678
ES.13229.6	chr16	+	6438	4	NNC	ENSMUSG00000050240.17	novel	2765	4	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_2	37.0075067460043	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAGTCTGTGACTATA	6312	False	NA	16	True	ATTAAA	-18	NA	17051436	17081293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17051595_17061097_17061184_17072831_17072931_17075198
ES.13229.60	chr16	+	962	4	NIC	ENSMUSG00000055692.22	novel	781	7	NA	NA	76	-7	intron_retention	FALSE	canonical	3	40	junction_3	108.001028801684	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGGGTCTCTTCTTT	NA	False	NA	4	True	AATAAA	-15	NA	17095034	17101086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17095115_17095205_17095457_17095532_17095756_17100678
ES.13229.7	chr16	+	2314	8	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1627	8	NA	NA	1	-1	intron_retention	FALSE	canonical	2	2	junction_2	104.69118825364	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	6312	False	NA	37	True	AATAAA	-22	NA	17051436	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17051595_17072831_17072931_17093929_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
ES.13229.8	chr16	+	3942	10	Fusion	ENSMUSG00000055692.22_ENSMUSG00000050240.17	novel	1631	10	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_3	99.7609488406172	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGGTTTCAT	6314	False	NA	37	True	AATAAA	-22	NA	17051438	17096524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_17051595_17072831_17072931_17075198_17076938_17093929_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ES.13229.9	chr16	+	4620	4	NNC	ENSMUSG00000050240.17	novel	2765	4	NA	NA	3	18	intron_retention	FALSE	canonical	1	1	junction_2	37.0075067460043	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCATACCCAAATTCACAA	6314	False	NA	NA	False	NA	NA	NA	17051438	17079477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17051595_17061097_17061184_17072831_17072931_17075198
ES.1323.1	chr1	-	3735	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGCTGTATAAAAAACAAA	6388	False	NA	NA	False	NA	NA	NA	132361498	132357763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132357800_132361500
ES.13230.1	chr16	+	9278	1	Antisense	novelGene_ENSMUSG00000041720.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGAAAGGCCAGTGACA	NA	False	NA	NA	False	NA	NA	NA	17119634	17128912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17119600_17128900
ES.13230.2	chr16	+	159	1	Intergenic	novelGene_11101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	17124817	17124976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17124800_17125000
ES.13231.1	chr16	+	172	1	Intergenic	novelGene_11102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATATTTTTTTCTT	4783	False	NA	NA	False	NA	NA	NA	17142093	17142265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17142100_17142300
ES.13232.1	chr16	+	254	1	Intergenic	novelGene_11103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGCTCAGATATGATA	5147	False	NA	NA	False	AAAAAG	-41	NA	17186788	17187042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17186800_17187000
ES.13233.1	chr16	+	2090	1	Antisense	novelGene_ENSMUSG00000041720.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAAAGAAGGCAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	17197912	17200002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17197900_17200000
ES.13234.1	chr16	+	158	1	Intergenic	novelGene_11104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATAAATAT	1033	False	NA	NA	False	NA	NA	NA	17201978	17202136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17202000_17202100
ES.13235.1	chr16	+	3281	1	Antisense	novelGene_ENSMUSG00000041720.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGGTCAAAATATAAAA	1586	False	NA	NA	False	NA	NA	NA	17202531	17205812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17202500_17205800
ES.13236.1	chr16	+	1099	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	-62	2410	-62	-2410	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATATTAGTTTCAATGG	1322	False	NA	26	True	AATATA	-24	NA	17223787	17246281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ES.13236.2	chr16	+	3177	6	NNC	ENSMUSG00000022765.11	novel	3447	5	NA	NA	21	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	39.2917294096353	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTACTT	1405	False	NA	NA	False	TATAAA	-36	NA	17223870	17248674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006_17248217_17248448
ES.13236.3	chr16	+	1926	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	22	1499	22	-1499	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACCTGACTATCTTAA	1406	False	NA	NA	False	AATAAA	-15	NA	17223871	17247192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ES.13236.4	chr16	+	3422	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	23	2	23	-2	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCTTGACTAAGCCC	1407	False	NA	NA	False	AGTAAA	-13	NA	17223872	17248689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ES.13237.1	chr16	-	3623	1	Genic_Genomic	ENSMUSG00000038965.18	novel	NA	NA	NA	NA	20086	2366	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	16971133	16967510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_16967500_16971100
ES.13237.10	chr16	-	745	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-2	1866	-2	-25	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATGGCATTTCTTTT	NA	False	NA	25	True	TTTAAA	-23	NA	17019358	16971744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ES.13237.12	chr16	-	783	5	NNC	ENSMUSG00000038965.18	novel	2906	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	949.32011855854	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGCTTGCTTTGTTTT	NA	False	NA	-20	True	ATTAAA	-16	NA	17019338	16971789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16972147_16977853_16978041_16989626_16989730_16994275_16994372_17019298
ES.13237.13	chr16	-	602	3	FSM	ENSMUSG00000038965.18	ENSMUST00000231643.2	650	3	-22	70	0	-1	multi-exon	FALSE	canonical	3	18	junction_2	1084	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGCTTGCTTTGTTTT	NA	False	NA	-20	True	ATTAAA	-16	NA	17019356	16971789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_17019298
ES.13237.14	chr16	-	669	4	NNC	ENSMUSG00000038965.18	novel	2609	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	842.524777083737	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCTGCTTGCTTTGTTT	NA	False	NA	-21	True	ATTAAA	-15	NA	17019334	16971790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16972147_16977859_16978041_16994275_16994372_17019298
ES.13237.16	chr16	-	3106	1	Intergenic	novelGene_11089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16984030	16980924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_16980900_16984000
ES.13237.17	chr16	-	176	2	Antisense	novelGene_ENSMUSG00000071636.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	671	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAGAAGTAG	9652	False	NA	NA	False	NA	NA	NA	17137931	17006035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_17006183_17137902
ES.13237.18	chr16	-	225	1	Intergenic	novelGene_11093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCACCATTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	17025334	17025109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17025100_17025300
ES.13237.19	chr16	-	2809	1	Antisense	novelGene_ENSMUSG00000071636.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	17028569	17025760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_17025800_17028600
ES.13237.2	chr16	-	2624	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019371	16969878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ES.13237.20	chr16	-	206	1	Intergenic	novelGene_11094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGAACTGAGACAAGCT	NA	False	NA	NA	False	NA	NA	NA	17049834	17049628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17049600_17049800
ES.13237.21	chr16	-	3806	1	Intergenic	novelGene_11095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGGAGCCTGGTACAGT	NA	False	NA	NA	False	AATAAA	-19	NA	17058477	17054671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17054700_17058500
ES.13237.22	chr16	-	175	2	Intergenic	novelGene_11097	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	4469	False	NA	NA	False	NA	NA	NA	17106760	17059671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17059766_17106679
ES.13237.23	chr16	-	173	1	Intergenic	novelGene_11098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	17082985	17082812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17082800_17083000
ES.13237.24	chr16	-	383	1	Intergenic	novelGene_11099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17084638	17084255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17084300_17084600
ES.13237.25	chr16	-	6998	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	-366	-2	55	1	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTTTGTTATGTAA	NA	False	NA	-22	True	AATAAA	-17	NA	17224123	17098213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.27	chr16	-	6433	54	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	78	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	31.8389951021317	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGTTATGTA	NA	False	NA	-23	True	AATAAA	-16	NA	17223679	17098214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.28	chr16	-	6562	55	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_32	31.2734356567643	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGTTATGTA	NA	False	NA	-23	True	AATAAA	-16	NA	17223737	17098214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140900_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.29	chr16	-	6595	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.5459470678253	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGTTATGTA	NA	False	NA	-23	True	AATAAA	-16	NA	17223729	17098214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101266_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.3	chr16	-	2512	3	FSM	ENSMUSG00000038965.18	ENSMUST00000231643.2	650	3	-22	-1840	0	-1	multi-exon	FALSE	canonical	3	18	junction_2	1084	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGGTGTATGGGTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	17019356	16969879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_17019298
ES.13237.30	chr16	-	6533	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_53	30.7946704543994	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223667	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204187_17207204_17207322_17223497
ES.13237.31	chr16	-	5196	22	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	-395	0	intron_retention	FALSE	canonical	3	123	junction_18	15.0474683536758	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	6393	False	NA	-24	True	AATAAA	-15	NA	17125989	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17100271_17100480_17100607_17100686_17100792_17101163_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929
ES.13237.33	chr16	-	6506	54	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_52	29.8825754600693	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223727	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17207204_17207322_17223497
ES.13237.34	chr16	-	6549	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.490309219821	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223697	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100707_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.35	chr16	-	6570	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	36.6505950561491	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223685	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098659_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171895_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.36	chr16	-	6512	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	31.300613333635	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223681	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176192_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.37	chr16	-	6441	53	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	31.6867760295668	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223712	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.4	chr16	-	1354	5	FSM	ENSMUSG00000038965.18	ENSMUST00000232668.2	1025	5	-27	-302	6	-1	multi-exon	FALSE	canonical	3	4	junction_1	853.056856252853	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGGTGTATGGGTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	17019350	16969879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16970800_16972047_16972147_16977853_16978041_16994275_16994372_17019298
ES.13237.40	chr16	-	6865	56	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	36.7579260019787	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223731	17098215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17154354_17154616_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.46	chr16	-	6463	54	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	70	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_40	31.5678139549207	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGTTTTGTTATG	NA	False	NA	-25	True	AATAAA	-14	NA	17223687	17098216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.48	chr16	-	5502	8	NIC	ENSMUSG00000041720.15	novel	6431	55	NA	NA	10772	-1	intron_retention	FALSE	canonical	3	134	junction_3	9.69114891779807	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	6961	False	NA	-26	True	AATAAA	-13	NA	17114822	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098665_17098883_17098974_17099712_17103142_17104515_17104646_17108978_17109100_17110743_17111875_17113235_17113327_17114759
ES.13237.49	chr16	-	6365	53	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	31.8510482582274	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	NA	False	NA	-26	True	AATAAA	-13	NA	17223775	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.5	chr16	-	2593	4	NNC	ENSMUSG00000038965.18	novel	2609	4	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_3	985.530426837357	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGGTGTATGGGTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	17019351	16969879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16972147_16977853_16978041_16994275_16994362_17019298
ES.13237.51	chr16	-	6374	53	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	71	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_51	29.9327834266818	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	NA	False	NA	-26	True	AATAAA	-13	NA	17223686	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17207204_17207322_17223497
ES.13237.52	chr16	-	5866	49	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	62	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_48	26.9156346551384	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	NA	False	NA	-26	True	AATAAA	-13	NA	17223695	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17223497
ES.13237.54	chr16	-	6294	52	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	34	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_51	28.5384595854335	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	NA	False	NA	-26	True	AATAAA	-13	NA	17223723	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17223497
ES.13237.56	chr16	-	6477	54	NIC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	31.6211216818546	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTTGTTTTGTTAT	NA	False	NA	-26	True	AATAAA	-13	NA	17223727	17098217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.59	chr16	-	7869	53	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	82	-3	intron_retention	FALSE	non_canonical	0	0	junction_19	37.8682071065882	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGCTTTTGTTTTGTT	NA	False	NA	-28	True	AATAAA	-11	NA	17223675	17098219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115539_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142973_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.6	chr16	-	3091	4	NNC	ENSMUSG00000038965.18	novel	1025	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_3	985.530426837357	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTGGGTGTATGGGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	17019323	16969880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16972147_16977853_16978041_16994275_16994372_17018781
ES.13237.60	chr16	-	6586	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	36.922215534824	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGCTTTTGTTTTGTT	NA	False	NA	-28	True	AATAAA	-11	NA	17223715	17098219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176246_17176752_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196381_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.62	chr16	-	7980	55	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	81	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	31.4281956446991	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATCCCAAA	NA	False	NA	-49	True	TATAAA	-5	NA	17223676	17098240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17116991_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.65	chr16	-	4421	39	NNC	ENSMUSG00000041720.15	novel	6630	55	NA	NA	31	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	28.0163683854087	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATCCCAAA	NA	False	NA	-49	True	TATAAA	-5	NA	17223726	17098240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168648_17223551
ES.13237.68	chr16	-	6418	55	NNC	ENSMUSG00000041720.15	novel	6431	55	NA	NA	-671	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_54	30.1710941888786	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATCCCAAA	NA	False	NA	-49	True	TATAAA	-5	NA	17224849	17098240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17224776
ES.13237.69	chr16	-	5332	44	NNC	ENSMUSG00000041720.15	novel	958	11	NA	NA	76	7170	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.6430053917625	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGGTTTCTGTATTC	NA	False	NA	NA	False	ATTAAA	-20	NA	17223681	17108277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17108466_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.7	chr16	-	2214	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-38	433	-38	-130	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTGTTCATGTTGCT	NA	False	NA	0	True	AATAAA	-35	NA	17019394	16970311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ES.13237.70	chr16	-	5336	44	NNC	ENSMUSG00000041720.15	novel	958	11	NA	NA	37	7165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.7407319566303	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAACATTTGGTTTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	17223720	17108282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17108436_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.71	chr16	-	3251	28	ISM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	48225	15074	-6836	2158	internal_fragment	FALSE	canonical	3	103	junction_24	13.4511257758036	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCGTTCGCTTGGATCC	428	False	NA	NA	False	AATACA	-25	NA	17175532	17113289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409
ES.13237.72	chr16	-	4434	29	NNC	ENSMUSG00000041720.15	novel	3855	8	NA	NA	28	-1417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.9199691782755	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTGCTCTGGTGTGTA	NA	False	NA	NA	False	AGTAAA	-17	NA	17223729	17131711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17132827_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.73	chr16	-	1077	8	FSM	ENSMUSG00000041720.15	ENSMUST00000231419.2	3855	8	80	2698	80	-2698	multi-exon	FALSE	canonical	3	160	junction_3	18.7442508192648	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACCTTTTGCTTCTGTT	NA	False	NA	-4	True	AATAAA	-22	NA	17223677	17185219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ES.13237.8	chr16	-	2299	5	NNC	ENSMUSG00000038965.18	novel	2906	5	NA	NA	-1	-135	intron_retention	FALSE	canonical	1	2	junction_2	950.044209497642	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCATTTTGTTCATG	NA	False	NA	-5	True	AATAAA	-30	NA	17019338	16970316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_16972147_16977853_16978041_16991076_16991223_16994275_16994372_17019298
ES.13237.9	chr16	-	1682	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-32	959	-32	-656	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGTCAAGATTTGAAT	NA	False	NA	-17	True	AATAAA	-29	NA	17019388	16970837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ES.13238.1	chr16	+	192	1	Intergenic	novelGene_11105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATCAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	17250878	17251070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17250900_17251100
ES.13239.1	chr16	+	5083	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-39	-2	-39	2	multi-exon	FALSE	canonical	3	254	junction_1	8	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTTCAGTGTCTCCT	3420	False	NA	22	True	AATAAA	-29	NA	17269811	17305300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.11	chr16	+	4969	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	23	-151	intron_retention	FALSE	canonical	0	0	junction_2	119.736748280922	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGAGTGTCTTT	3482	False	NA	4	True	ATTAAA	-15	NA	17269873	17305147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270653_17286756_17287223_17301131_17301233_17301524
ES.13239.12	chr16	+	4857	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	23	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.680592207868	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTGTTTCAGTGTC	3482	False	NA	18	True	AATAAA	-25	NA	17269873	17305296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270108_17270267_17270653_17286756_17287223_17301524
ES.13239.13	chr16	+	4846	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	23	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.680592207868	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGTGGCAGCAGCCTCGG	3482	False	NA	6	True	AATAAA	-13	NA	17269873	17305284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270102_17270260_17270653_17286756_17287223_17301524
ES.13239.14	chr16	+	2775	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	23	2244	23	1063	multi-exon	FALSE	canonical	3	254	junction_1	8	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTACTCAGAAAGGCAAAG	3482	False	NA	NA	False	TTTAAA	-41	NA	17269873	17303054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.15	chr16	+	3156	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	32	1854	-20	1453	multi-exon	FALSE	canonical	3	254	junction_1	8	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGTAATGGTCATTTG	3491	False	NA	NA	False	AGTAAA	-13	NA	17269882	17303444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.16	chr16	+	5339	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	36	-333	-16	333	multi-exon	FALSE	canonical	3	254	junction_1	8	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGCCTGTCTTATTT	3495	False	NA	NA	False	NA	NA	NA	17269886	17305631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.17	chr16	+	4838	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	-15	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	123.680592207868	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTGTTTCAGTGTC	3496	False	NA	18	True	AATAAA	-25	NA	17269887	17305296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270653_17286756_17287223_17301524_17303543_17303707
ES.13239.19	chr16	+	1830	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	48	3164	-4	143	multi-exon	FALSE	canonical	3	254	junction_1	8	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTCAAGTCTGGCTGG	3507	False	NA	NA	False	AGTAAA	-22	NA	17269898	17302134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.2	chr16	+	4943	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-26	125	-26	-125	multi-exon	FALSE	canonical	3	254	junction_1	8	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTAGTGCCTTTTTATT	3433	False	NA	30	True	ATTAAA	-41	NA	17269824	17305173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.20	chr16	+	1497	2	ISM	ENSMUSG00000006134.5	ENSMUST00000231228.2	577	3	109	-723	109	723	3prime_fragment	FALSE	canonical	3	254	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTACCAAGTCACTGTC	3620	False	NA	NA	False	AATAAA	-21	NA	17270011	17287612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17270653_17286756
ES.13239.21	chr16	+	3000	1	NIC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	14275	725	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACCAAGTCACTGTCTT	7943	False	NA	NA	False	AATAAA	-23	NA	17284614	17287614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17284600_17287600
ES.13239.22	chr16	+	176	1	Intergenic	novelGene_11107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	7944	False	NA	NA	False	NA	NA	NA	17284615	17284791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17284600_17284800
ES.13239.23	chr16	+	5461	1	NIC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	29348	-150	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATTGAGTGTCTTTT	NA	False	NA	5	True	ATTAAA	-16	NA	17299687	17305148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17299700_17305100
ES.13239.24	chr16	+	4498	1	NIC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	30459	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTGTTTCAGTGTC	NA	False	NA	18	True	AATAAA	-25	NA	17300798	17305296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17300800_17305300
ES.13239.3	chr16	+	4594	2	FSM	ENSMUSG00000006134.5	ENSMUST00000231629.2	780	2	-509	-3305	-20	-2	multi-exon	FALSE	canonical	3	14	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTGTTTCAGTGTC	3439	False	NA	18	True	AATAAA	-25	NA	17269830	17305296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17301524
ES.13239.4	chr16	+	4572	3	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	-19	-145	intron_retention	FALSE	canonical	0	0	junction_1	135	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGTCTTTTCTTAA	3440	False	NA	10	True	ATTAAA	-21	NA	17269831	17305153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270653_17287100_17287223_17301524
ES.13239.5	chr16	+	3888	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	-19	1173	-19	-1173	multi-exon	FALSE	canonical	3	254	junction_1	8	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATACGTGCGTGCGTG	3440	False	NA	NA	False	AATAAA	-20	NA	17269831	17304125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17286756_17287223_17301524
ES.13239.6	chr16	+	4723	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	122.268375124378	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	3448	False	NA	19	True	AATAAA	-26	NA	17269839	17305297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17269915_17270243_17270653_17286756_17287223_17301524
ES.13239.7	chr16	+	4438	2	FSM	ENSMUSG00000006134.5	ENSMUST00000231629.2	780	2	-498	-3160	-9	-147	multi-exon	FALSE	canonical	3	14	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGAGTGTCTTTTCTT	3450	False	NA	8	True	ATTAAA	-19	NA	17269841	17305151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17270653_17301524
ES.13239.8	chr16	+	4570	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	-4	-147	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	122.268375124378	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGAGTGTCTTTTCTT	3455	False	NA	8	True	ATTAAA	-19	NA	17269846	17305151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17269915_17270243_17270653_17286756_17287223_17301524
ES.13239.9	chr16	+	5132	4	NNC	ENSMUSG00000006134.5	novel	5042	3	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_2	119.736748280922	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCGGTGTTTCAGTGTCT	3473	False	NA	19	True	AATAAA	-26	NA	17269864	17305297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17270653_17286756_17287223_17301127_17301233_17301524
ES.1324.1	chr1	+	171	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTGGTTATTGATC	NA	False	NA	NA	False	NA	NA	NA	132395983	132396154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132396000_132396200
ES.13240.1	chr16	-	190	1	Intergenic	novelGene_11106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAAATT	7342	False	NA	NA	False	NA	NA	NA	17274172	17273982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17274000_17274200
ES.13241.1	chr16	+	2731	21	FSM	ENSMUSG00000022763.19	ENSMUST00000023448.15	2688	21	-46	3	6	1	multi-exon	FALSE	canonical	1	3	junction_11	2.45916652547159	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCCTAGTGTAAT	4202	False	NA	NA	False	ATTAAA	-16	NA	17307480	17325346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17307756_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
ES.13241.2	chr16	+	2497	20	NIC	ENSMUSG00000022763.19	novel	2688	21	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	2.78101996076272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAACTGTGTCCTAGTG	4241	False	NA	NA	False	ATTAAA	-12	NA	17307519	17325342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17307756_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
ES.13241.3	chr16	+	2433	20	NNC	ENSMUSG00000022763.19	novel	2688	21	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.67442308962254	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTGTGTCCTAGTGTA	4305	False	NA	NA	False	ATTAAA	-14	NA	17307583	17325344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17307756_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318359_17318399_17318610_17318712_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
ES.13241.4	chr16	+	6769	14	NNC	ENSMUSG00000022763.19	novel	2688	21	NA	NA	-33	1	intron_retention	FALSE	canonical	0	0	junction_12	3.05182068075037	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTCCTAGTGTAAT	4399	False	NA	NA	False	ATTAAA	-16	NA	17307677	17325346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318708_17318789_17318903_17319316_17319404_17319954_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321485_17322881_17323547
ES.13242.1	chr16	+	173	1	Intergenic	novelGene_11108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAGAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	17326112	17326285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17326100_17326300
ES.13243.1	chr16	+	3385	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	9	0	9	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	32	True	NA	NA	NA	17326560	17344197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.10	chr16	+	3003	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.4644954285159	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326828	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341186_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.11	chr16	+	3616	18	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_6	30.4111389172161	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326829	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335408_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286
ES.13243.12	chr16	+	3172	20	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-7	-20	intron_retention	FALSE	canonical	2	77	junction_5	15.2297274544868	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGCCCTCTCAATTTCT	NA	False	NA	10	True	NA	NA	NA	17326829	17344175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343368_17343540
ES.13243.19	chr16	+	3161	20	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-8	-19	intron_retention	FALSE	canonical	2	77	junction_5	15.2551703237508	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCCTCTCAATTTCTA	NA	False	NA	11	True	NA	NA	NA	17326844	17344176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.2	chr16	+	3302	20	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.8851004926574	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326561	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.20	chr16	+	2928	20	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-7	-30	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	29.0081658194814	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTAACTGAACAGCCCT	NA	False	NA	0	True	NA	NA	NA	17326845	17344165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.21	chr16	+	3341	18	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_3	30.4809203468385	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGTCTCCGAGTCT	NA	False	NA	29	True	NA	NA	NA	17326846	17344194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.22	chr16	+	3113	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-5	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.4457378178173	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGAACAGCCCTCTCAA	NA	False	NA	5	True	NA	NA	NA	17326847	17344170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336338_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.23	chr16	+	2973	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	28.2072242519536	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326854	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338415_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.24	chr16	+	3305	19	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	2	-27	intron_retention	FALSE	canonical	0	0	junction_7	29.8393331438411	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTGAACAGCCCTCTC	NA	False	NA	3	True	NA	NA	NA	17326854	17344168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337332_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.27	chr16	+	4330	12	NIC	ENSMUSG00000022761.13	novel	2491	20	NA	NA	554	0	intron_retention	FALSE	canonical	2	99	junction_9	11.0108886753744	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	7	True	NA	30	True	NA	NA	NA	17336483	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.28	chr16	+	3065	11	NIC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-950	0	intron_retention	FALSE	canonical	2	99	junction_8	11.171839597846	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	1282	False	NA	32	True	NA	NA	NA	17337831	17344197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.29	chr16	+	3212	10	NIC	ENSMUSG00000022761.13	novel	2214	11	NA	NA	-944	-27	intron_retention	FALSE	canonical	2	99	junction_8	11.9546468056113	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTGAACAGCCCTCTC	1288	False	NA	3	True	NA	NA	NA	17337837	17344168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17338911_17339308_17339420_17340020_17340114_17340244_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286
ES.13243.3	chr16	+	3298	20	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	267	2	-18	0	intron_retention	FALSE	canonical	2	77	junction_5	14.9080282894561	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326818	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286
ES.13243.31	chr16	+	1663	9	ISM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	13691	49	-264	-47	3prime_fragment	FALSE	canonical	2	99	junction_6	8.0068330193654	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAGAGCTGCAGCGGC	3693	False	NA	-17	True	NA	NA	NA	17340242	17344148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.4	chr16	+	2801	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	268	325	-17	19	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGCTTCTGTGAA	NA	False	NA	27	True	AATAAA	-40	NA	17326819	17343872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.6	chr16	+	3034	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.3575386802169	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326822	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337337_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.7	chr16	+	3214	20	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-8	-29	intron_retention	FALSE	canonical	1	1	junction_8	28.9105028409268	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTAACTGAACAGCCCTC	NA	False	NA	1	True	NA	NA	NA	17326828	17344166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338415_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.8	chr16	+	3355	20	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	3	junction_13	28.5774449542083	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGTCTCCGAGTCT	NA	False	NA	29	True	NA	NA	NA	17326828	17344194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340424_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13243.9	chr16	+	3103	21	NNC	ENSMUSG00000022761.13	novel	3394	21	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	35.8458853984666	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTCCGAGTCTT	NA	False	NA	30	True	NA	NA	NA	17326828	17344195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340424_17340588_17340840_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ES.13244.1	chr16	-	4326	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	72	-3150	-9	3150	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAGAACACCTTAATCC	7258	False	NA	NA	False	AAAAAG	-2	NA	17348928	17342695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
ES.13244.10	chr16	-	2963	1	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	0	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTGCTGTTTGGCT	7275	False	NA	-6	True	AATAAA	-12	NA	17348911	17345948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17345900_17348900
ES.13244.12	chr16	-	2866	2	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	43	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTGCTGTTTGGCT	7205	False	NA	-6	True	AATAAA	-12	NA	17348981	17345948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17348722_17348888
ES.13244.13	chr16	-	1144	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	1	103	1	-7	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTGCTGTTTGGCT	7187	False	NA	-6	True	AATAAA	-12	NA	17348999	17345948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
ES.13244.2	chr16	-	2889	2	FSM	ENSMUSG00000022760.18	ENSMUST00000231699.2	454	2	-1916	-519	-9	0	multi-exon	FALSE	canonical	3	101	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAATCTCTGTTTGCAGT	7258	False	NA	97	True	NA	NA	NA	17348928	17345845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17346605_17346798
ES.13244.3	chr16	-	1176	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	72	0	-9	0	multi-exon	FALSE	canonical	3	43	junction_4	27.8118679703468	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAATCTCTGTTTGCAGT	7258	False	NA	97	True	NA	NA	NA	17348928	17345845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
ES.13244.4	chr16	-	787	2	NIC	ENSMUSG00000022760.18	novel	1248	5	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAAATCTCTGTTTGCA	7268	False	NA	95	True	NA	NA	NA	17348918	17345847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17346605_17348888
ES.13244.9	chr16	-	952	4	NIC	ENSMUSG00000022760.18	novel	1110	5	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	43.1354455948547	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTGCTGTTTGGCT	7270	False	NA	-6	True	AATAAA	-12	NA	17348916	17345948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17346605_17346798_17346940_17348641_17348722_17348841
ES.13245.1	chr16	-	166	1	Intergenic	novelGene_11109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGGATTAAGAAGT	540	False	NA	NA	False	NA	NA	NA	17355646	17355480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17355500_17355600
ES.13246.1	chr16	-	226	1	Intergenic	novelGene_11110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGGACTGCCACCAG	NA	False	NA	NA	False	NA	NA	NA	17356493	17356267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17356300_17356500
ES.13247.1	chr16	-	2836	6	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_4	6.71118469422501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACATTGGATGTCAG	NA	False	NA	NA	False	TTTAAA	-12	NA	17394528	17390395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393833_17393944_17394068_17394503
ES.13247.2	chr16	-	1672	6	FSM	ENSMUSG00000022756.18	ENSMUST00000231615.2	1711	6	34	5	7	1	multi-exon	FALSE	canonical	2	2	junction_4	6.22896460095897	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTACACTGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	17394528	17390818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17392866_17393480_17393830_17394503
ES.13247.3	chr16	-	2288	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	53	940	3	-2	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCATGTACACTGTGG	NA	False	NA	NA	False	NA	NA	NA	17394532	17390821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
ES.13247.4	chr16	-	2707	5	NIC	ENSMUSG00000022756.18	novel	1920	7	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1	junction_3	7.25861557047899	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGTCATGTACACTGT	NA	False	NA	NA	False	NA	NA	NA	17394546	17390823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17391317_17391419_17392451_17392815_17393833_17393944_17394068_17394503
ES.13248.1	chr16	+	159	1	Intergenic	novelGene_11111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	17402035	17402194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17402000_17402200
ES.13249.1	chr16	-	175	1	Intergenic	novelGene_11112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTACA	NA	False	NA	NA	False	NA	NA	NA	17406896	17406721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17406700_17406900
ES.1325.1	chr1	+	173	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATGTAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132397590	132397763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132397600_132397800
ES.13250.1	chr16	+	178	1	Intergenic	novelGene_11113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAACCTTTTGCCT	4579	False	NA	NA	False	NA	NA	NA	17410861	17411039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17410900_17411000
ES.13251.1	chr16	+	4732	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-1259	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.2721156355067	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTGTTTTGGTTTAT	NA	False	NA	20	True	NA	NA	NA	17435958	17462697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436104_17437155_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443823_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.10	chr16	+	4591	20	NIC	ENSMUSG00000005899.15	novel	4565	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437212	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.11	chr16	+	2396	15	NIC	ENSMUSG00000005899.15	novel	2446	16	NA	NA	-3	7	intron_retention	FALSE	canonical	3	12	junction_2	66.8849530072012	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGGTTTCTAGATCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	17437214	17460019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225
ES.13251.12	chr16	+	4539	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	-3	-4	0	3	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCCCTGTTTTGGTTT	NA	False	NA	18	True	NA	NA	NA	17437217	17462695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.13	chr16	+	3257	20	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437217	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.14	chr16	+	3172	18	NNC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.7912100799547	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437218	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444423_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.16	chr16	+	3166	19	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	100.422149074252	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437220	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17444305_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.17	chr16	+	3695	17	FSM	ENSMUSG00000005899.15	ENSMUST00000232417.2	5017	17	-6	1328	0	152	multi-exon	FALSE	canonical	3	228	junction_11	24.7736629306205	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437220	17461363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.18	chr16	+	2792	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	-172	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAGGAATTTAAGGG	NA	False	NA	NA	False	AAAAAG	-17	NA	17437221	17461039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.19	chr16	+	3447	17	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	150	intron_retention	FALSE	canonical	0	0	junction_12	68.6735654655414	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437221	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.2	chr16	+	3555	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-963	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.6676359466567	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGGGCTGAATCTTT	NA	False	NA	5	True	AATAAA	-18	NA	17436254	17461364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436509_17437124_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.21	chr16	+	4267	16	NIC	ENSMUSG00000005899.15	novel	5017	17	NA	NA	1	150	intron_retention	FALSE	canonical	3	228	junction_11	24.2922941599915	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437221	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.22	chr16	+	4469	19	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.3230339576485	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437221	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458791_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.23	chr16	+	3071	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	152	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	64.3390672215121	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437221	17461363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17460032_17460162_17460337
ES.13251.24	chr16	+	3494	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	3	1035	0	445	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTTTTTGTTAAACAG	NA	False	NA	NA	False	NA	NA	NA	17437223	17461656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.25	chr16	+	3610	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	151	intron_retention	FALSE	canonical	3	228	junction_12	24.0435015211579	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437223	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.26	chr16	+	3245	20	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	0	151	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.9144135942346	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437223	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17438449_17438495_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.27	chr16	+	5115	12	NIC	ENSMUSG00000005899.15	novel	5017	17	NA	NA	0	151	intron_retention	FALSE	canonical	3	228	junction_9	22.7570713739853	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437223	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17459460_17459561_17460162_17460337
ES.13251.28	chr16	+	4912	17	NIC	ENSMUSG00000005899.15	novel	3046	19	NA	NA	0	2	intron_retention	FALSE	canonical	3	223	junction_5	25.1718313547108	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCCCTGTTTTGGTT	NA	False	NA	17	True	NA	NA	NA	17437223	17462694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.29	chr16	+	3700	21	NNC	ENSMUSG00000005899.15	novel	4565	20	NA	NA	1	480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	108.713051194417	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTGAATGTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	17437224	17461691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17455879_17455982_17456359_17456506_17457137_17457229_17457608_17457692_17457783_17457872_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.3	chr16	+	3503	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-962	150	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.4617689785248	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17436255	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436492_17437155_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.30	chr16	+	3604	16	NIC	ENSMUSG00000005899.15	novel	5017	17	NA	NA	1	152	intron_retention	FALSE	canonical	3	12	junction_2	68.1991853975463	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437224	17461363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.33	chr16	+	3302	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	152	intron_retention	FALSE	canonical	3	223	junction_5	25.2659213567786	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437224	17461363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459694_17460032_17460162_17460337
ES.13251.34	chr16	+	4939	18	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	228	junction_12	24.0435015211579	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437224	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.35	chr16	+	3211	19	NNC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.1338839583989	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437224	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444489_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.36	chr16	+	3223	19	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	151	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	65.0682452753252	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437224	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443559_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.37	chr16	+	4441	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437224	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.38	chr16	+	3285	20	FSM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	7	1331	1	150	multi-exon	FALSE	canonical	2	4	junction_11	83.2673829522215	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437224	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.39	chr16	+	4614	20	FSM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	8	1	-1	0	multi-exon	FALSE	canonical	2	4	junction_11	83.2673829522215	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437225	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.4	chr16	+	3613	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-962	150	intron_retention	FALSE	canonical	0	0	junction_2	97.0058398447687	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17436255	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436449_17437155_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459694_17460032_17460162_17460337
ES.13251.41	chr16	+	2369	17	ISM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	6	2672	0	7	5prime_fragment	FALSE	canonical	3	223	junction_5	22.1683896573477	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGGTTTCTAGATCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	17437226	17460019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561
ES.13251.42	chr16	+	3277	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	151	intron_retention	FALSE	canonical	3	223	junction_4	25.9976043612859	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437227	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.43	chr16	+	2993	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	4	38	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGGGCTTTGTATTTC	NA	False	NA	NA	False	AAGAAA	-32	NA	17437230	17461249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.44	chr16	+	5938	14	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	223	junction_5	22.0354743578965	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437231	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17460162_17460337
ES.13251.45	chr16	+	4446	18	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.8520030471689	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437231	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.46	chr16	+	3078	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	11	1443	5	37	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGGGCTTTGTATTT	NA	False	NA	NA	False	AAGAAA	-31	NA	17437231	17461248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.47	chr16	+	3514	17	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	5	150	intron_retention	FALSE	canonical	3	12	junction_2	66.1576892261965	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437231	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.49	chr16	+	3697	17	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	-3	149	intron_retention	FALSE	canonical	3	228	junction_11	24.6817240078565	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTGTCTGGGCTGAAT	NA	False	NA	1	True	AATAAA	-14	NA	17437234	17461360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.5	chr16	+	3403	22	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-951	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.633601085839	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17436266	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436306_17437155_17437299_17438449_17438495_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.50	chr16	+	3532	20	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	0	446	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGTTAAACAGT	NA	False	NA	NA	False	NA	NA	NA	17437237	17461657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.51	chr16	+	4757	17	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	68.6735654655414	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437241	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.52	chr16	+	4346	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	66.9944995934633	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437242	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.53	chr16	+	5012	17	NNC	ENSMUSG00000005899.15	novel	5017	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	68.6203322638414	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437244	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17444403_17444489_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.54	chr16	+	3555	20	FSM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	28	1040	1	441	multi-exon	FALSE	canonical	2	4	junction_11	83.2673829522215	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTCCTTTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	17437245	17461652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.55	chr16	+	4531	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.5069781904482	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437248	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17440482_17440509_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.57	chr16	+	3655	16	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	25	150	intron_retention	FALSE	canonical	3	223	junction_5	26.9440572709869	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437277	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.58	chr16	+	3446	21	NIC	ENSMUSG00000005899.15	novel	2256	17	NA	NA	46	150	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	95.6987330114668	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17437298	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437525_17438449_17438495_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.59	chr16	+	3348	19	NIC	ENSMUSG00000005899.15	novel	2256	17	NA	NA	49	151	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65.1970422717753	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17437301	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437525_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.6	chr16	+	4774	22	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-937	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	104.344340989814	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGGTTTATTTT	NA	False	NA	23	True	NA	NA	NA	17436280	17462700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436322_17437124_17437299_17438449_17438495_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.60	chr16	+	3339	19	NNC	ENSMUSG00000005899.15	novel	2256	17	NA	NA	-48	149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.1970422717753	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTGTCTGGGCTGAAT	NA	False	NA	1	True	AATAAA	-14	NA	17437332	17461360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437549_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.61	chr16	+	4457	18	ISM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	2082	0	3	0	3prime_fragment	FALSE	canonical	3	223	junction_4	25.9504451895595	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17439302	17462691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.62	chr16	+	2964	16	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	2419	151	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	70.9280073188456	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	NA	False	NA	3	True	AATAAA	-16	NA	17441769	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17441856_17443583_17443727_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.63	chr16	+	4397	9	ISM	ENSMUSG00000005899.15	ENSMUST00000231627.2	2329	18	14831	-695	-2004	151	3prime_fragment	FALSE	canonical	3	228	junction_3	27.6947648482525	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	2174	False	NA	3	True	AATAAA	-16	NA	17454181	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.64	chr16	+	2515	10	NNC	ENSMUSG00000005899.15	novel	4565	20	NA	NA	-34	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.68166195893	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCTGGGCTGAATCT	4144	False	NA	3	True	AATAAA	-16	NA	17456151	17461362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17456506_17457137_17457229_17457608_17457710_17457783_17457872_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.7	chr16	+	3435	20	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-937	150	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.4617689785248	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCTGGGCTGAATC	NA	False	NA	2	True	AATAAA	-15	NA	17436280	17461361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17436449_17437155_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.8	chr16	+	5083	19	NNC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_10	86.0905531015647	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATCTCCCTGTTTTGG	NA	False	NA	15	True	NA	NA	NA	17437201	17462692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453467_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13251.9	chr16	+	3136	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	-16	152	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTGGGCTGAATCTT	NA	False	NA	4	True	AATAAA	-17	NA	17437201	17461363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ES.13252.1	chr16	-	2740	1	Antisense	novelGene_ENSMUSG00000005899.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAAAGAATAGGCTC	NA	False	NA	NA	False	NA	NA	NA	17455373	17452633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_17452600_17455400
ES.13253.1	chr16	+	2332	4	FSM	ENSMUSG00000041617.11	ENSMUST00000182822.8	1040	4	30	-1322	25	0	multi-exon	FALSE	canonical	2	5	junction_2	1.88561808316413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAAGCTTCCTTCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	17464363	17468601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17464648_17465471_17465517_17465930_17465991_17466658
ES.13253.2	chr16	+	2988	1	NIC	ENSMUSG00000041617.11	novel	1273	8	NA	NA	1050	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAAGCTTCCTTCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	17465613	17468601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17465600_17468600
ES.13254.1	chr16	+	175	1	Intergenic	novelGene_11114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAATAAGGGAG	3980	False	NA	NA	False	NA	NA	NA	17495407	17495582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17495400_17495600
ES.13255.1	chr16	+	2267	1	FSM	ENSMUSG00000116696.2	ENSMUST00000231269.2	279	1	-1758	-230	-1758	230	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTAGTCTTGGCCTATG	NA	False	NA	NA	False	NA	NA	NA	17530966	17533233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17531000_17533200
ES.13256.1	chr16	-	8021	7	NIC	ENSMUSG00000012114.18	novel	3105	17	NA	NA	-4931	585	intron_retention	FALSE	canonical	3	263	junction_6	15.0996688705415	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGCTTTTATCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	17478648	17468486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471222_17471308_17471470_17471788_17471856_17472877_17473146_17473307_17473436_17473541
ES.13256.10	chr16	-	3217	17	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.1333328585536	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTTTTGCGAGTCTG	NA	False	NA	-3	True	AATAAA	-36	NA	17540776	17469064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481318_17490928_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.11	chr16	-	3513	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	97.1766486253888	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCTTTTTGCGAGTCT	NA	False	NA	-4	True	AATAAA	-35	NA	17540769	17469065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520820_17540619
ES.13256.12	chr16	-	3319	17	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.1703585758459	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACCTTTTTGCGAGTCT	NA	False	NA	-4	True	AATAAA	-35	NA	17540765	17469065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473412_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17503316_17503369_17515470_17515559_17540619
ES.13256.13	chr16	-	3272	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-25	-17	-7	4	multi-exon	FALSE	canonical	3	37	junction_9	64.8068946467118	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTACCTTTTTGCGAGT	NA	False	NA	-6	True	AATAAA	-33	NA	17540786	17469067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.14	chr16	-	3429	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	-12	-7	-12	4	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTACCTTTTTGCGAGT	NA	False	NA	-6	True	AATAAA	-33	NA	17540823	17469067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.15	chr16	-	3238	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.1333328585536	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATCTACCTTTTTGCG	NA	False	NA	-9	True	AATAAA	-30	NA	17540764	17469070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.16	chr16	-	3711	19	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	87.9571479559405	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540763	17469074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520820_17540619
ES.13256.17	chr16	-	3162	16	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	73.0161625943188	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540812	17469074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.18	chr16	-	3559	20	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_18	98.1250827054718	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540759	17469074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17515940_17516057_17524262_17524348_17540619
ES.13256.19	chr16	-	3533	16	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	73	junction_12	56.4385998723884	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540765	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.2	chr16	-	3737	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	572	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATTTCTGAGAGCAAG	NA	False	NA	NA	False	AATAAA	-20	NA	17540776	17468499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.20	chr16	-	3460	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	173	junction_12	37.2575495705233	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540793	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.21	chr16	-	3328	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	68.7278872900185	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540757	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473409_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.23	chr16	-	5260	12	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-20848	-1	intron_retention	FALSE	canonical	3	214	junction_8	31.0467522688973	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17494565	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268
ES.13256.24	chr16	-	3319	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	72.3282448286974	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540751	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17503316_17503369_17515470_17515559_17540619
ES.13256.26	chr16	-	2971	14	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	9	junction_8	89.4474160425352	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540766	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.28	chr16	-	3874	19	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	87.9571479559405	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540733	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17521014_17540619
ES.13256.29	chr16	-	3196	17	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	103.794248847178	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGCATCTACCTTT	NA	False	NA	-14	True	AATAAA	-25	NA	17540762	17469075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
ES.13256.3	chr16	-	3822	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	-10	-582	0	569	multi-exon	TRUE	canonical	3	37	junction_9	64.8068946467118	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTCATTTCTGAGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	17540771	17468502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.33	chr16	-	3416	17	NNC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	150	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	89.018168791545	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTTTATTGCATCTA	NA	False	NA	-19	True	AATAAA	-20	NA	17540535	17469080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540211
ES.13256.34	chr16	-	3852	14	NIC	ENSMUSG00000012114.18	novel	3404	18	NA	NA	-2	2	intron_retention	FALSE	canonical	3	37	junction_7	81.8281501309064	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGAGTTTATTGCATC	NA	False	NA	-21	True	AATAAA	-18	NA	17540766	17469082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.36	chr16	-	3276	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	71.063546784979	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGAGTTTATTGCATC	NA	False	NA	-21	True	AATAAA	-18	NA	17540789	17469082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540723
ES.13256.37	chr16	-	3369	15	NNC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	-2	1	intron_retention	FALSE	canonical	2	12	junction_7	100.676284624107	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGGAGTTTATTGCAT	NA	False	NA	-22	True	AATAAA	-17	NA	17540756	17469083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473409_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.38	chr16	-	2991	16	NNC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.0101693263158	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGGAGTTTATTGCAT	NA	False	NA	-22	True	AATAAA	-17	NA	17540777	17469083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473627_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.4	chr16	-	3943	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	35	-568	0	565	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATCTCCTCATTTCTGA	NA	False	NA	NA	False	AATAAA	-13	NA	17540776	17468506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.40	chr16	-	3353	18	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	97.580664883826	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGGAGTTTATTGCAT	NA	False	NA	-22	True	AATAAA	-17	NA	17540798	17469083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
ES.13256.41	chr16	-	3234	18	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	92.8940684784422	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGGAGTTTATTGCAT	NA	False	NA	-22	True	AATAAA	-17	NA	17540772	17469083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
ES.13256.43	chr16	-	3720	10	NIC	ENSMUSG00000012114.18	novel	3404	18	NA	NA	-18803	0	intron_retention	FALSE	canonical	3	214	junction_6	30.6525732510923	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17492520	17469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17471222_17471308_17471470_17471788_17471856_17472877_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268
ES.13256.45	chr16	-	6803	7	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	-4061	0	intron_retention	FALSE	canonical	3	251	junction_4	21.2184406171194	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17477778	17469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471222_17471308_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541
ES.13256.46	chr16	-	3277	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_16	72.446424169865	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540776	17469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17540619
ES.13256.47	chr16	-	3514	19	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	88.9635103446324	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540754	17469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520648_17520820_17540619
ES.13256.48	chr16	-	3908	13	ISM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	47206	10	-19888	0	3prime_fragment	FALSE	canonical	3	214	junction_9	29.9443929086343	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17493605	17469084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268
ES.13256.49	chr16	-	3681	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	97.1766486253888	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCAGGAGTTTATTGC	NA	False	NA	-24	True	AATAAA	-15	NA	17540763	17469085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17521014_17540619
ES.13256.5	chr16	-	3889	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.8230896996317	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGACAATCTCCTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	17540771	17468512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473627_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.50	chr16	-	3787	20	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	98.0119275911789	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCAGGAGTTTATTGC	NA	False	NA	-24	True	AATAAA	-15	NA	17540765	17469085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520820_17524262_17524348_17540619
ES.13256.51	chr16	-	3562	19	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	105.84684953061	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCAGGAGTTTATTGC	NA	False	NA	-24	True	AATAAA	-15	NA	17540753	17469085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520820_17524262_17524348_17540619
ES.13256.52	chr16	-	3156	16	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	71.9600506454025	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540812	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17503316_17503369_17515470_17515559_17540619
ES.13256.53	chr16	-	3587	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	101.581031114834	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540771	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520820_17540619
ES.13256.55	chr16	-	3847	15	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	73	junction_11	57.6513093466901	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540771	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471222_17471308_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.56	chr16	-	3669	19	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	88.2491737449517	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540756	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17520470_17520797_17540619
ES.13256.57	chr16	-	3126	16	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	72.1906734511691	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540754	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492547_17503312_17503369_17515470_17515559_17540619
ES.13256.58	chr16	-	3118	17	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	80.5208629797272	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCAGGAGTTTATTG	NA	False	NA	-25	True	AATAAA	-14	NA	17540771	17469086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473409_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.6	chr16	-	6802	6	NIC	ENSMUSG00000012114.18	novel	3105	17	NA	NA	-3401	559	intron_retention	FALSE	canonical	3	251	junction_3	23.2413424741343	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGACAATCTCCTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	17477118	17468512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541
ES.13256.60	chr16	-	2220	2	Intergenic	novelGene_11115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17510295	17507867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17508373_17508580
ES.13256.61	chr16	-	176	1	Intergenic	novelGene_11116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAAAG	313	False	NA	NA	False	NA	NA	NA	17508568	17508392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17508400_17508600
ES.13256.62	chr16	-	581	2	FSM	ENSMUSG00000012114.18	ENSMUST00000232312.2	469	2	16	-128	1	-83	multi-exon	FALSE	canonical	1	2	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGGTTTACAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	17540763	17520576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17521014_17540619
ES.13256.7	chr16	-	3500	19	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	9	11	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	83.3667525581917	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGCGAGTCTGAGCC	NA	False	NA	1	True	AATAAA	-40	NA	17540802	17469060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
ES.13256.8	chr16	-	3211	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	-1	10	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTGCGAGTCTGAGC	NA	False	NA	0	True	AATAAA	-39	NA	17540812	17469061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13256.9	chr16	-	3047	16	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	2	9	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	78.1211594611572	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTTGCGAGTCTGAG	NA	False	NA	-1	True	AATAAA	-38	NA	17540769	17469062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ES.13257.1	chr16	+	122	1	Intergenic	novelGene_11117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTATGACAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	17542216	17542338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17542200_17542300
ES.13258.1	chr16	+	224	1	Intergenic	novelGene_11118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACAAAAAACCTACTAA	NA	False	NA	NA	False	NA	NA	NA	17549030	17549254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17549000_17549300
ES.13259.1	chr16	+	170	1	Intergenic	novelGene_11119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGATAAACATT	NA	False	NA	NA	False	NA	NA	NA	17559673	17559843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17559700_17559800
ES.1326.1	chr1	+	3551	15	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-7108	23	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	123.434689001834	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACACTGCCTGCTTCTGG	NA	False	NA	32	True	AATAAA	-41	NA	132397994	132433420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132399759_132399806_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.10	chr1	+	3459	15	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-5916	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.269395480389	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTATACATGCTTGTT	NA	False	NA	10	True	AATAAA	-19	NA	132399186	132433398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132399248_132399759_132399806_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.11	chr1	+	5108	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-5901	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.291978119906	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	132399201	132433400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132399298_132403429_132404867_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.12	chr1	+	3659	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-5899	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.492742689904	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132399203	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132399248_132399759_132399806_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.13	chr1	+	3526	15	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-5566	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.269395480389	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132399536	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132399666_132399759_132399806_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.14	chr1	+	2229	2	Antisense	novelGene_ENSMUSG00000097760.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAAATAAAAAAACAAA	NA	False	NA	NA	False	AATACA	-38	NA	132399546	132402923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132399624_132400771
ES.1326.15	chr1	+	5192	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-5474	6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	119.320408983543	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132399628	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132399806_132403429_132404867_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.16	chr1	+	3902	15	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-621	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	120.420945360982	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132404481	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132404867_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424591_132424767_132425667_132425746_132431501
ES.1326.17	chr1	+	3906	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-533	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	151.802444717541	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACCACAAGTATACAT	NA	False	NA	3	True	AATAAA	-12	NA	132404569	132433391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132404867_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132422856_132422955_132423943_132424014_132424591_132424767_132425667_132425746_132431501
ES.1326.18	chr1	+	2292	15	NNC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	-273	120	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	113.350391373342	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATCTTCTGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	132404829	132431966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132404867_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.19	chr1	+	6859	14	FSM	ENSMUSG00000048174.3_ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	-248	-3755	-246	5	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTCTAACCCTTTGTT	NA	False	NA	11	True	AATAAA	-21	NA	132404856	132436382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.2	chr1	+	3694	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7108	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	135.654200901492	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132397994	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132399759_132399806_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424591_132424767_132425667_132425746_132431501
ES.1326.20	chr1	+	4568	11	NIC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	-244	0	intron_retention	FALSE	canonical	3	60	junction_10	88.3603983694053	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132404858	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.21	chr1	+	6734	14	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	-243	-3	intron_retention	FALSE	canonical	3	277	junction_4	39.7596328248497	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTATGGCAGTCTAAC	NA	False	NA	3	True	AATAAA	-13	NA	132404859	132436374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.22	chr1	+	6378	9	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-241	2	intron_retention	FALSE	canonical	3	303	junction_3	25.9033660940041	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	132404861	132433399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.23	chr1	+	3757	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-241	2	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	132404861	132433399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.24	chr1	+	3878	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-240	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.150249640674	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAAGTATACATGCTTG	NA	False	NA	8	True	AATAAA	-17	NA	132404862	132433396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132405467_132405619_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.25	chr1	+	3859	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	-227	-776	-225	6	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132404877	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.26	chr1	+	2885	15	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.767048240033	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATAAGTGTTTGAAATT	NA	False	NA	NA	False	AATAAA	-23	NA	132405092	132432633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132405467_132405593_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.27	chr1	+	2872	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	-2	-14	0	14	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAAATTTTCTGAAA	NA	False	NA	NA	False	AATAAA	-31	NA	132405102	132432641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.28	chr1	+	3311	13	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	131.299805365008	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405105	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431504
ES.1326.29	chr1	+	3512	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	6	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	114.801397843169	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132405107	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.3	chr1	+	3933	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7105	187	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	118.675954692693	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGATGTTAATGAAAACAG	NA	False	NA	NA	False	AATAAA	-16	NA	132397997	132433584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132399759_132399806_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.30	chr1	+	3573	14	NNC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	115.845643067625	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132405107	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.31	chr1	+	3653	15	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	123.474797064843	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAGTATACATGCTT	NA	False	NA	7	True	AATAAA	-16	NA	132405107	132433395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132429332_132429479_132431501
ES.1326.33	chr1	+	2334	14	NIC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTAGTTTTATCCATCT	NA	False	NA	NA	False	NA	NA	NA	132405110	132432225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.34	chr1	+	4225	12	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	17	junction_9	96.6290512926574	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405112	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.35	chr1	+	3268	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	126.365488510078	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405115	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417351_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.36	chr1	+	2737	14	NIC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	12	7	combination_of_known_junctions	FALSE	canonical	3	277	junction_4	39.7596328248497	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTTTGAAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	132405116	132432634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.4	chr1	+	6730	16	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7105	4	intron_retention	FALSE	canonical	2	5	junction_1	118.675954692693	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGTCTAACCCTTTGT	NA	False	NA	10	True	AATAAA	-20	NA	132397997	132436381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132398126_132399759_132399806_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.40	chr1	+	3449	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	94.530919145834	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAAGTATACATGC	NA	False	NA	5	True	AATAAA	-14	NA	132405116	132433393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420337_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.41	chr1	+	5309	10	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	1	intron_retention	FALSE	canonical	3	13	junction_4	140.047434644899	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405116	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.42	chr1	+	5300	14	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	-1180	intron_retention	FALSE	canonical	3	277	junction_4	39.7596328248497	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTGGGGCCATCGTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	132405116	132435197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.43	chr1	+	3797	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	12	-953	12	183	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTGATGTTAATGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	132405116	132433580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.45	chr1	+	4257	13	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	0	intron_retention	FALSE	canonical	2	4	junction_9	101.137969570725	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405116	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422955_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.46	chr1	+	4141	13	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	12	6	intron_retention	FALSE	canonical	3	17	junction_10	96.8702955846975	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	NA	False	NA	15	True	AATAAA	-24	NA	132405116	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.47	chr1	+	3391	14	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-11	24	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	94.1666657939292	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCCTGCTTCTGGA	NA	False	NA	33	True	AATAAA	-42	NA	132405132	132433421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.48	chr1	+	4178	13	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-10	1	intron_retention	FALSE	canonical	3	281	junction_8	36.9996246227205	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTATACATGCTTGTT	NA	False	NA	10	True	AATAAA	-19	NA	132405133	132433398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.49	chr1	+	6726	14	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7	266	intron_retention	FALSE	canonical	3	277	junction_4	39.7596328248497	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGGTCACTGCAGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	132405136	132436643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.5	chr1	+	5020	15	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-7093	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.999849939893	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTATACATGCTTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	132398009	132433399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132403429_132404867_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.50	chr1	+	3560	13	NIC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-7	1	intron_retention	FALSE	canonical	2	11	junction_12	94.2965181400317	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405136	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431504
ES.1326.51	chr1	+	3993	13	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7	2	intron_retention	FALSE	canonical	3	277	junction_4	37.5776972862007	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACAAGTATACATGCTT	NA	False	NA	7	True	AATAAA	-16	NA	132405136	132433395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.52	chr1	+	4597	13	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7	3	intron_retention	FALSE	canonical	3	19	junction_3	97.7710974675031	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	132405136	132433400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.53	chr1	+	3349	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	122.99319267255	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACCACAAGTATACAT	NA	False	NA	3	True	AATAAA	-12	NA	132405146	132433391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.54	chr1	+	3291	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	143.385151864298	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405146	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412540_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431504
ES.1326.55	chr1	+	3216	13	NIC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	3	1	intron_retention	FALSE	canonical	3	277	junction_4	37.5776972862007	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTACAATAAGTGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	132405146	132432628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.56	chr1	+	5327	6	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_3	139.907969751548	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTATGGCAGTCTAAC	NA	False	NA	3	True	AATAAA	-13	NA	132405146	132436374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412540_132424591_132424767_132425667_132425746_132431501
ES.1326.57	chr1	+	8316	10	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	17	junction_7	105.973907806603	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGCAGTCTAACC	NA	False	NA	4	True	AATAAA	-14	NA	132405146	132436375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.59	chr1	+	4021	12	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	1	intron_retention	FALSE	canonical	3	13	junction_4	102.376391906702	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405146	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.6	chr1	+	3765	16	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7093	31	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	118.675954692693	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTCTGGAACTCAGC	NA	False	NA	40	True	ATTAAA	-32	NA	132398009	132433428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132399759_132399806_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.60	chr1	+	4018	12	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	3	3	intron_retention	FALSE	canonical	3	13	junction_4	98.8114491308514	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	132405146	132433400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421913_132422007_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.61	chr1	+	4679	12	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	4	4	intron_retention	FALSE	canonical	0	0	junction_8	151.601751009317	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATACATGCTTGTTTGT	NA	False	NA	13	True	AATAAA	-22	NA	132405147	132433401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421913_132422007_132422084_132422594_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.62	chr1	+	5477	11	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	4	1	intron_retention	FALSE	canonical	3	281	junction_7	30.8862428922652	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405147	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421913_132422007_132422080_132422594_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.63	chr1	+	3517	14	NNC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	117.921646837633	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	132405165	132433400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417416_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.64	chr1	+	4118	11	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_4	103.561624166484	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405165	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132421552_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.65	chr1	+	3128	13	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	101.937344590794	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATACATGCTTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	132405177	132433400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412540_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.66	chr1	+	3500	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	21	183	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	121.30215586605	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTGATGTTAATGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	132405193	132433580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420337_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424595_132424767_132425667_132425746_132431501
ES.1326.67	chr1	+	3346	13	NIC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	24	2	intron_retention	FALSE	canonical	3	281	junction_8	36.9996246227205	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTACAATAAGTGTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	132405196	132432629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.68	chr1	+	3614	14	NIC	ENSMUSG00000026439.15	novel	716	5	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	98.5986425245921	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405326	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405593_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.69	chr1	+	3712	14	NIC	ENSMUSG00000026439.15	novel	716	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	117.8932924401	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405345	132433397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132405593_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.7	chr1	+	3464	14	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-7093	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	97.8665919631679	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132398009	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.70	chr1	+	3404	14	NNC	ENSMUSG00000026439.15	novel	716	5	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.8428912960528	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132405356	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132405413_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.71	chr1	+	6548	14	Fusion	ENSMUSG00000048174.3_ENSMUSG00000026439.15	novel	716	5	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	1	junction_1	98.5986425245921	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGCAGTCTAACC	NA	False	NA	4	True	AATAAA	-14	NA	132405373	132436375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_132405593_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.72	chr1	+	3243	12	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	7127	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	103.248556710542	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132412506	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.1326.73	chr1	+	178	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATACAT	1950	False	NA	NA	False	NA	NA	NA	132419532	132419710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132419500_132419700
ES.1326.74	chr1	+	2853	9	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	-11182	6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	120.159724429611	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACATGCTTGTTTGTAA	2706	False	NA	15	True	AATAAA	-24	NA	132420288	132433403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425670_132425746_132431501
ES.1326.76	chr1	+	5837	8	ISM	ENSMUSG00000048174.3_ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	16446	-3753	-9920	3	3prime_fragment	FALSE	canonical	3	60	junction_7	107.470546510879	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCAGTCTAACCCTTTG	3968	False	NA	9	True	AATAAA	-19	NA	132421550	132436380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.77	chr1	+	6827	1	FSM	ENSMUSG00000026439.15	ENSMUST00000187834.2	1923	1	-4876	-28	-4876	24	mono-exon	FALSE	NA	NA	NA	NA	NA	531	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGCCTGCTTCTGGA	9012	False	NA	33	True	AATAAA	-42	NA	132426594	132433421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132426600_132433400
ES.1326.78	chr1	+	7834	1	FSM	ENSMUSG00000026439.15	ENSMUST00000187834.2	1923	1	-2922	-2989	-2922	2985	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTCTAACCCTTTGTT	NA	False	NA	11	True	AATAAA	-21	NA	132428548	132436382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132428500_132436400
ES.1326.8	chr1	+	3806	15	NNC	ENSMUSG00000026439.15	novel	2856	14	NA	NA	-7093	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.080641903624	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATACATGCTTGTTTGT	NA	False	NA	13	True	AATAAA	-22	NA	132398009	132433401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132405044_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ES.1326.9	chr1	+	3393	15	NNC	ENSMUSG00000026439.15	novel	2456	14	NA	NA	-7093	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	141.934017438113	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACAAGTATACATGCT	NA	False	NA	6	True	AATAAA	-15	NA	132398009	132433394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132398126_132399759_132399806_132411789_132411816_132412483_132412540_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ES.13260.1	chr16	+	3662	10	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-2808	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.835764135333	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17574673	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17574974_17575570_17575641_17576718_17576796_17576873_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.10	chr16	+	3688	4	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	-13	-151	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	186.763665274235	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTTGGGGTATGCCCA	NA	False	NA	NA	False	GATAAA	-21	NA	17577513	17596919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265
ES.13260.11	chr16	+	3283	6	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-7	-2325	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	124.351759135124	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCTGCGGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	17577519	17608903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ES.13260.12	chr16	+	625	3	NNC	ENSMUSG00000022750.19	novel	464	3	NA	NA	-7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	89	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577519	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17582247_17582461_17610871
ES.13260.13	chr16	+	3130	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	149.069335098358	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577520	17611246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.14	chr16	+	3224	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	164.993350034344	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577520	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.15	chr16	+	3782	6	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-2350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	204.757026741453	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17577520	17608878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17595510_17602066_17602260_17607000
ES.13260.16	chr16	+	2926	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-6	346	-6	-346	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGGTGTGTACTAGAAC	NA	False	NA	NA	False	AATAAA	-25	NA	17577520	17596724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ES.13260.17	chr16	+	3294	6	ISM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-20	2325	-6	-2325	5prime_fragment	FALSE	canonical	0	0	junction_1	195.277853326997	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCTGCGGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	17577520	17608903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ES.13260.18	chr16	+	7000	1	NIC	ENSMUSG00000022750.19	novel	464	3	NA	NA	-6	2124	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATCATAAGTGTACCA	NA	False	NA	NA	False	NA	NA	NA	17577520	17584520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17577500_17584500
ES.13260.19	chr16	+	2343	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.57106311294	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577524	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17582247_17582348_17589625_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.2	chr16	+	3332	9	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-1704	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.974482240008	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17575777	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17575832_17576718_17576796_17576899_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.20	chr16	+	3130	5	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	2	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.765005152538	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGTGTTTAGCAGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	17577528	17596713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17577895_17578119_17582247_17582511_17589567_17589734_17594265
ES.13260.21	chr16	+	5252	4	ISM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	-12	12182	2	1976	5prime_fragment	FALSE	canonical	0	0	junction_1	225.875088390809	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTGTCTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	17577528	17599046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265
ES.13260.22	chr16	+	5614	6	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	3	-2	intron_retention	FALSE	canonical	3	178	junction_1	124.351759135124	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577529	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ES.13260.23	chr16	+	3899	6	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-6	-2350	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	179.320495203421	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17577534	17608878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ES.13260.24	chr16	+	3547	4	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	-6	-271	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	186.763665274235	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACTTGTTCTTTTATT	NA	False	NA	NA	False	AAGAAA	-33	NA	17577534	17596799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265
ES.13260.25	chr16	+	3743	4	NIC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	-5	-170	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	207.025494940975	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATATTTATTTACTGC	NA	False	NA	NA	False	TATAAA	-27	NA	17577535	17596900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265
ES.13260.27	chr16	+	5428	4	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	-5	1611	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	186.763665274235	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGCAATTCAAATAGGT	NA	False	NA	NA	False	NA	NA	NA	17577535	17598681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265
ES.13260.28	chr16	+	3826	6	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-4	-2325	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	162.175707182056	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCTGCGGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	17577536	17608903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000
ES.13260.29	chr16	+	1839	6	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-4	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	234.3074902772	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAATGTGGCTACAGT	NA	False	NA	11	True	AATAAA	-20	NA	17577536	17611238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17577571_17582247_17582511_17589567_17589734_17602066_17602260_17607000_17607235_17610289
ES.13260.3	chr16	+	4529	6	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-1617	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.702875994309	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGGATATTTATTTA	NA	False	NA	NA	False	TATAAA	-23	NA	17575864	17596896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17576449_17576607_17576796_17576873_17577571_17582247_17582511_17589567_17589734_17594265
ES.13260.32	chr16	+	5782	4	NNC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	2	1972	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	186.763665274235	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTTTTGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	17577542	17599042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265
ES.13260.33	chr16	+	2770	8	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.96360268225	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577548	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17609956_17610175_17610289
ES.13260.34	chr16	+	3400	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	178.339018600966	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTGGCTACAGTCTGA	NA	False	NA	15	True	AATAAA	-24	NA	17577550	17611242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578423_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.35	chr16	+	3200	8	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	224.908053775451	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGGCTACAGTCTGAG	NA	False	NA	16	True	AATAAA	-25	NA	17577558	17611243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578119_17582247_17582511_17587894_17588006_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.36	chr16	+	3163	8	NNC	ENSMUSG00000022750.19	novel	695	2	NA	NA	259	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	233.634285993809	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577799	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17609956_17610175_17610289
ES.13260.37	chr16	+	5442	7	NNC	ENSMUSG00000022750.19	novel	2596	7	NA	NA	1059	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	179.822520527572	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17579277	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17581359_17581416_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.39	chr16	+	4456	6	ISM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	2781	-16	-333	-2	3prime_fragment	FALSE	canonical	3	453	junction_5	19.2707031527134	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17580321	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.40	chr16	+	3039	7	NNC	ENSMUSG00000022750.19	novel	2596	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	228.029237891401	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	769	False	NA	17	True	AATAAA	-26	NA	17581956	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17609956_17610175_17610289
ES.13260.41	chr16	+	4868	4	NIC	ENSMUSG00000022750.19	novel	2596	7	NA	NA	288	-3	intron_retention	FALSE	canonical	1	14	junction_2	228.877453867542	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGGCTACAGTCTGAG	1057	False	NA	16	True	AATAAA	-25	NA	17582244	17611243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17582511_17589567_17589734_17602066_17602260_17607000
ES.13260.42	chr16	+	3424	3	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	6422	-2352	combination_of_known_splicesites	FALSE	canonical	1	14	junction_1	249	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	7191	False	NA	NA	False	NA	NA	NA	17588378	17608876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17589734_17602066_17602260_17607000
ES.13260.43	chr16	+	960	1	Intergenic	novelGene_11120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCTGTGTATAGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	17591644	17592604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17591600_17592600
ES.13260.44	chr16	+	5228	1	NIC	ENSMUSG00000022750.19	novel	3266	4	NA	NA	9709	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGAGAGGATATTTAT	NA	False	NA	NA	False	TATAAA	-20	NA	17591665	17596893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17591700_17596900
ES.13260.45	chr16	+	4047	2	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	19461	2343	18159	-2325	internal_fragment	FALSE	canonical	3	512	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCTGCGGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	17600115	17608903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17602260_17607000
ES.13260.5	chr16	+	3144	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-52	174	-7	-174	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGGATATTTATTTA	NA	False	NA	NA	False	TATAAA	-23	NA	17577474	17596896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ES.13260.6	chr16	+	2609	5	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-7	-2325	combination_of_known_splicesites	FALSE	canonical	1	14	junction_3	209.877940717933	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCTGCGGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	17577474	17608903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17602066_17602260_17607000
ES.13260.7	chr16	+	2686	8	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	214.910422725186	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGTTACATCTAATG	NA	False	NA	1	True	AATAAA	-10	NA	17577497	17611228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17582247_17582511_17587894_17588006_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ES.13260.8	chr16	+	5258	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	-20	-1972	-20	1972	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTTTTGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	17577506	17599042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ES.13260.9	chr16	+	4327	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	192.491053183143	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGCTACAGTCTGAGT	NA	False	NA	17	True	AATAAA	-26	NA	17577507	17611244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17596731_17602066_17602260_17607000_17607235_17610289
ES.13261.1	chr16	+	3367	11	NNC	ENSMUSG00000012017.5	novel	3308	11	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.65329983228432	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCCAGTGCTCTAATT	NA	False	NA	NA	False	AATAAA	-11	NA	17615066	17626154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621262_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
ES.13261.2	chr16	+	3650	9	NIC	ENSMUSG00000012017.5	novel	3445	10	NA	NA	-60	1	intron_retention	FALSE	canonical	1	1	junction_2	2.6809513236909	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGCTCTAATTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	17615085	17626158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622789_17624212_17624366_17624615
ES.13261.3	chr16	+	2631	8	ISM	ENSMUSG00000012017.5	ENSMUST00000232577.2	3522	10	6	2514	6	-1185	intron_retention	FALSE	canonical	1	1	junction_2	1.74963553055941	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACACGTTTTGAGTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	17615184	17623640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349
ES.13261.4	chr16	+	2896	7	ISM	ENSMUSG00000012017.5	ENSMUST00000232577.2	3522	10	5719	-2	-368	0	3prime_fragment	FALSE	canonical	1	1	junction_1	2.19215773966098	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGTGCTCTAATTAC	1358	False	NA	NA	False	AATAAA	-13	NA	17620897	17626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212
ES.13261.5	chr16	+	2084	2	ISM	ENSMUSG00000012017.5	ENSMUST00000231383.2	2641	5	1380	3	-27	-1	intron_retention	FALSE	canonical	3	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTCCAGTGCTCTAAT	3106	False	NA	NA	False	AATAAA	-10	NA	17622645	17626153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17622789_17624212
ES.13262.1	chr16	+	1561	1	FSM	ENSMUSG00000116652.3	ENSMUST00000235474.2	699	1	-121	-741	-121	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGGCATTACTAAGAT	4604	False	NA	NA	False	AATAAA	-15	NA	17651310	17652871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17651300_17652900
ES.13263.1	chr16	+	2184	9	Antisense	novelGene_ENSMUSG00000003166.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGGAGGGGTATGCAC	NA	False	NA	NA	False	NA	NA	NA	17659694	17690480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17660649_17661841_17662073_17662846_17663000_17667454_17667657_17674613_17674795_17675123_17675198_17676222_17676434_17677266_17677391_17690426
ES.13263.2	chr16	+	1513	1	Intergenic	novelGene_11121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	17672394	17673907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17672400_17673900
ES.13263.3	chr16	+	177	1	Intergenic	novelGene_11122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	17684632	17684809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17684600_17684800
ES.13264.1	chr16	-	4079	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-76	0	-43	0	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709600	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.10	chr16	-	3855	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	132.631858452422	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709547	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709420
ES.13264.11	chr16	-	3798	9	NIC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	148.630203861799	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709556	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.12	chr16	-	4165	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	183.525175384741	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709551	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17690924_17691051_17709249
ES.13264.13	chr16	-	4130	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_6	171.123376183803	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709505	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676135_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.15	chr16	-	4130	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	173.47430165109	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709554	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676135_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.16	chr16	-	4103	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_3	136.210621220716	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709566	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.18	chr16	-	4121	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	183.525175384741	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709535	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17708479_17708578_17709249
ES.13264.2	chr16	-	3884	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_7	133.459939890424	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709545	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676295_17677267_17677391_17690426_17690550_17709249
ES.13264.21	chr16	-	4123	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.23741868439	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709577	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.22	chr16	-	3985	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	171.893449627062	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709558	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676135_17676295_17677267_17677391_17690426_17690550_17709249
ES.13264.24	chr16	-	3791	9	NIC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	182.923310433635	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709507	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17661835_17662073_17662846_17663000_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.25	chr16	-	3862	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	167.223071241846	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709545	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709420
ES.13264.26	chr16	-	3766	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	185.93215276573	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709511	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667597_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709420
ES.13264.27	chr16	-	9261	8	NIC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	236	junction_5	79.1629680482237	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709558	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17661835_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.28	chr16	-	4037	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	139.630022594987	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709551	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674805_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.29	chr16	-	4108	11	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	168.238521153748	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709561	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17664356_17664430_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.3	chr16	-	4781	9	NIC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	143.683680353755	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709519	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17661835_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.30	chr16	-	3997	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	135.193688215587	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709536	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677280_17677391_17690426_17690550_17709249
ES.13264.31	chr16	-	4884	9	FSM	ENSMUSG00000003166.21	ENSMUST00000135229.8	5703	9	-59	878	-20	1	multi-exon	FALSE	canonical	3	328	junction_2	56.0178542966437	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709577	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17677391_17690426_17690550_17709249
ES.13264.32	chr16	-	4106	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	165.586350603463	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709542	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676135_17676435_17677267_17677391_17690426_17690552_17709249
ES.13264.33	chr16	-	4145	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	178.889798479399	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709559	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17678565_17678669_17690426_17690550_17709249
ES.13264.34	chr16	-	3973	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	137.528807307801	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709561	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667597_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.35	chr16	-	3957	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.897581585006	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATGGTCAGTTCTT	NA	False	NA	-7	True	AATAAA	-13	NA	17709563	17658223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674713_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.36	chr16	-	3162	11	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.898292381917	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAGCATGGTCAGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	17709553	17658225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17658566_17659437_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.37	chr16	-	10415	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	2	-8949	2	-1	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAGCATGGTCAGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	17709511	17658225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.39	chr16	-	3984	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-18	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	174.069235551352	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGGTCAGGTTGG	NA	False	NA	-9	True	ATTAAA	-17	NA	17709575	17658309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674805_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.4	chr16	-	9298	8	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_5	196.551286343451	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709569	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17667659_17674615_17674805_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.41	chr16	-	3350	7	NIC	ENSMUSG00000003166.21	novel	3790	9	NA	NA	1	-85	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	169.734760402485	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGGTCAGGTTGG	NA	False	NA	-9	True	ATTAAA	-17	NA	17709556	17658309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.42	chr16	-	4827	10	NNC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	-12	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	174.299869318495	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTTTTGGTCAGGTT	NA	False	NA	-11	True	ATTAAA	-15	NA	17709569	17658311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17666670_17667659_17674615_17674793_17675121_17675199_17676135_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.43	chr16	-	3716	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-11	298	-11	-292	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTGATGAGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	17709535	17658516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.44	chr16	-	2917	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	-13	1141	-13	-186	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCGTGTCTTTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	17709570	17659359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.45	chr16	-	2888	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-35	1150	-2	-195	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGCACATTCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	17709559	17659368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.46	chr16	-	2491	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	178	1376	78	-421	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCCTGAGTTGTCATC	NA	False	NA	NA	False	CATAAA	-30	NA	17709379	17659594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.47	chr16	-	2643	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-33	1393	0	-438	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATGGTTCAAGTGGA	NA	False	NA	NA	False	CATAAA	-13	NA	17709557	17659611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.48	chr16	-	2065	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-32	1970	1	31	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGGGCTGTTAGTCTC	NA	False	NA	NA	False	NA	NA	NA	17709556	17660188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.49	chr16	-	1904	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-43	2142	-10	-65	multi-exon	FALSE	canonical	3	236	junction_7	73.3575717518876	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTAGGAGTGTATGTTTC	NA	False	NA	NA	False	NA	NA	NA	17709567	17660360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.5	chr16	-	4143	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	-98	0	-98	0	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709655	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.50	chr16	-	1506	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	-37	-1	7	1	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACGTGTGCATTTGA	NA	False	NA	70	True	NA	NA	NA	17709550	17667173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.51	chr16	-	1431	7	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	-32	9027	1	-71	5prime_fragment	FALSE	canonical	3	236	junction_4	83.6932228770977	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTGTTTACAGTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	17709556	17667245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.52	chr16	-	5269	4	ISM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	28688	71	-17784	-71	intron_retention	FALSE	canonical	3	387	junction_2	9.10433352249844	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTGTTTACAGTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	17680825	17667245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223
ES.13264.53	chr16	-	2254	6	ISM	ENSMUSG00000003166.21	ENSMUST00000135229.8	5703	9	-33	9905	6	-76	5prime_fragment	FALSE	canonical	3	387	junction_2	45.6175404860893	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGCTGACTGTTTACAG	NA	False	NA	-7	True	AATAAA	-12	NA	17709551	17667250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17677391_17690426_17690550_17709249
ES.13264.6	chr16	-	8441	9	NIC	ENSMUSG00000003166.21	novel	4003	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	236	junction_6	76.989853227552	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709507	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17660642_17661835_17662073_17662846_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ES.13264.7	chr16	-	3896	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	175.69361659884	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709552	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17661929_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13264.8	chr16	-	4043	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	135.772503989233	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709547	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676452_17677267_17677391_17690426_17690550_17709249
ES.13264.9	chr16	-	3988	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.100745688875	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709562	17658218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667597_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ES.13265.1	chr16	-	2820	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	-32	-3	1	3	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTATCAATTGTTTA	NA	False	NA	3	True	NA	NA	NA	17729211	17718569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ES.13265.10	chr16	-	2885	9	NIC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	3	1053	intron_retention	FALSE	canonical	3	90	junction_6	34.7985272676876	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729176	17719628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17720188_17720681_17720798_17722865_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ES.13265.11	chr16	-	3165	8	NIC	ENSMUSG00000003527.10	novel	2821	10	NA	NA	3	1053	intron_retention	FALSE	canonical	3	145	junction_5	20.7206886655707	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729176	17719628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17720188_17720681_17720798_17722865_17724238_17724972_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ES.13265.12	chr16	-	1754	10	NNC	ENSMUSG00000003527.10	novel	2821	10	NA	NA	4	1053	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	57.2598581732848	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729175	17719628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725468_17725553_17725787_17727768_17727865_17727951_17728121_17729025
ES.13265.15	chr16	-	2125	10	NNC	ENSMUSG00000003527.10	novel	2821	10	NA	NA	4	1052	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	75.2587306776422	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCAGGCTGCTGATCCA	NA	False	NA	-2	True	ATTAAA	-17	NA	17729175	17719629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17723762_17724238_17724972_17725107_17725383_17725468_17725553_17725787_17727768_17727865_17727951_17728121_17729025
ES.13265.16	chr16	-	3904	7	NIC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	-6	1051	intron_retention	FALSE	canonical	3	90	junction_4	39.5281193863586	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCAGGCTGCTGATCC	NA	False	NA	-3	True	ATTAAA	-16	NA	17729185	17719630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17720188_17720681_17720798_17722865_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ES.13265.17	chr16	-	1137	3	FSM	ENSMUSG00000022738.8	ENSMUST00000012279.6	1172	3	43	-8	43	8	multi-exon	FALSE	canonical	3	24	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAAGTCCCTGTGTCTC	NA	False	NA	NA	False	AATAAA	-33	NA	17732880	17730962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17731583_17732229_17732484_17732617
ES.13265.18	chr16	-	1897	1	NIC	ENSMUSG00000022738.8	novel	1172	3	NA	NA	51	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGTCCAGGATTTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	17732872	17730975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17731000_17732900
ES.13265.19	chr16	-	859	2	NIC	ENSMUSG00000022738.8	novel	1172	3	NA	NA	52	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACAGTCCAGGATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	17732871	17730977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17731583_17732617
ES.13265.2	chr16	-	3951	9	NIC	ENSMUSG00000003527.10	novel	2821	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	145	junction_6	19.4032052764485	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729183	17718572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17720188_17720681_17720798_17722865_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ES.13265.20	chr16	-	811	2	NNC	ENSMUSG00000022738.8	novel	1172	3	NA	NA	561	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACAGTCCAGGATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	17732362	17730977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17731583_17732156
ES.13265.3	chr16	-	5696	12	Fusion	ENSMUSG00000003527.10_ENSMUSG00000022738.8	novel	2821	10	NA	NA	53	-2	multi-exon	FALSE	canonical	3	24	junction_11	62.4258899458966	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	-2	True	NA	NA	NA	17732870	17718574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025_17731583_17732229_17732484_17732617
ES.13265.4	chr16	-	5386	11	Fusion	ENSMUSG00000003527.10_ENSMUSG00000022738.8	novel	2821	10	NA	NA	523	-2	multi-exon	FALSE	canonical	3	11	junction_6	68.0374161766891	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	-2	True	NA	NA	NA	17732400	17718574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725468_17725553_17725787_17727768_17727865_17727951_17728121_17729025_17731583_17732229
ES.13265.5	chr16	-	3127	10	NNC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	61.7085943551135	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	-2	True	NA	NA	NA	17729194	17718574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17728696
ES.13265.6	chr16	-	4459	9	Fusion	ENSMUSG00000003527.10_ENSMUSG00000022738.8	novel	2821	10	NA	NA	52	-2	intron_retention	FALSE	canonical	1	1	junction_8	76.5317540305983	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	False	NA	-2	True	NA	NA	NA	17732871	17718574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_17720188_17720681_17720798_17722865_17724238_17724972_17725107_17725383_17725468_17725553_17725787_17727768_17727865_17727951_17728121_17732229
ES.13265.7	chr16	-	3157	10	NNC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	62.6284359349195	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTATTTTTCTATCAA	NA	False	NA	-4	True	NA	NA	NA	17729183	17718576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17720188_17720681_17720798_17722865_17722976_17723762_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ES.13265.8	chr16	-	2942	11	NNC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.089623166805	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTATTTTTCTATCAA	NA	False	NA	-4	True	NA	NA	NA	17729184	17718576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17720188_17720681_17720798_17721249_17721406_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ES.13265.9	chr16	-	1759	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	6	1056	6	1053	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729206	17719628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ES.13266.1	chr16	-	5385	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	39	-3758	29	3758	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATCGTTGCGGTCCTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	17746044	17739328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.10	chr16	-	1523	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	51	-1	combination_of_known_junctions	FALSE	canonical	3	240	junction_5	577.203568235396	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745700	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745109_17745157_17745230_17745331_17745408
ES.13266.11	chr16	-	2111	6	NIC	ENSMUSG00000003528.16	novel	689	7	NA	NA	46	-1	intron_retention	FALSE	canonical	3	1746	junction_4	81.8911472626926	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745705	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17745157_17745230
ES.13266.12	chr16	-	1746	7	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	330	1	-2	-1	intron_retention	FALSE	canonical	3	1746	junction_4	81.75369512546	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745753	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230
ES.13266.15	chr16	-	1650	7	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	240	junction_5	604.334804190157	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745753	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745109_17745331_17745408
ES.13266.18	chr16	-	2049	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	19	-1	intron_retention	FALSE	canonical	3	1593	junction_7	122.988302081863	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746054	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.19	chr16	-	1520	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	662.681072674958	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746043	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.2	chr16	-	2059	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	-382	-11	-382	11	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGTAGATGGGGGT	NA	False	NA	-10	True	AATAAA	-27	NA	17746465	17743075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.20	chr16	-	1742	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	29	-1	intron_retention	FALSE	canonical	3	1593	junction_7	125.294754519908	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746044	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.22	chr16	-	1581	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	3	232	junction_6	574.006399736776	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTCTCCTGTCCATCCC	NA	False	NA	-25	True	AATAAA	-12	NA	17746102	17743090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745408_17745517_17745849
ES.13266.23	chr16	-	1325	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	18	323	8	136	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGTTTCGTGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	17746065	17743409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.25	chr16	-	1276	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	-30	130	combination_of_known_junctions	FALSE	canonical	3	240	junction_5	577.203568235396	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACATGCCTGTTTCGTG	NA	False	NA	NA	False	NA	NA	NA	17745781	17743415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745109_17745157_17745230_17745331_17745408
ES.13266.26	chr16	-	1387	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	18	130	intron_retention	FALSE	canonical	3	1593	junction_7	131.986393856584	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACATGCCTGTTTCGTG	NA	False	NA	NA	False	NA	NA	NA	17746055	17743415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745517_17745849
ES.13266.27	chr16	-	1186	7	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	40	118	combination_of_known_splicesites	FALSE	canonical	3	232	junction_6	619.968278758411	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTGTGAGCCACAT	NA	False	NA	NA	False	NA	NA	NA	17745711	17743427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745408
ES.13266.28	chr16	-	1303	9	NNC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	1	116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	621.588489275662	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGCTTGTGAGCCAC	NA	False	NA	NA	False	NA	NA	NA	17746072	17743429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17743792_17743893_17743959_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.29	chr16	-	1256	9	NNC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	29	96	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_4	613.769500708531	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTGCTCACTTATCCA	NA	False	NA	NA	False	NA	NA	NA	17746044	17743449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744396_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.3	chr16	-	2306	5	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	30	-1	intron_retention	FALSE	canonical	3	1593	junction_4	135.296664777813	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746043	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17745517_17745849
ES.13266.30	chr16	-	1140	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	44	482	34	11	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGCCTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	17746039	17743568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13266.5	chr16	-	1550	9	NNC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	623.222021032633	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745786	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745667
ES.13266.6	chr16	-	1938	5	NIC	ENSMUSG00000003528.16	novel	816	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1859	junction_1	41.4306649717332	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17745755	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744605_17745017
ES.13266.7	chr16	-	1774	7	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	33	-1	intron_retention	FALSE	canonical	3	1593	junction_6	130.109462462275	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746040	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745517_17745849
ES.13266.9	chr16	-	1648	9	NNC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	624.456713872147	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	False	NA	-22	True	AATAAA	-15	NA	17746048	17743087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17743810_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ES.13267.1	chr16	-	4492	1	Intergenic	novelGene_11123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGATGCCTAAGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	17753546	17749054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17749100_17753500
ES.13268.1	chr16	+	181	1	Intergenic	novelGene_11124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCTACTTTCCTAT	2000	False	NA	NA	False	NA	NA	NA	17765901	17766082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17765900_17766100
ES.13269.1	chr16	+	193	1	Intergenic	novelGene_11125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACTGGAAAA	NA	False	NA	NA	False	ATTAAA	-2	NA	17780157	17780350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17780200_17780400
ES.1327.1	chr1	-	4198	1	FSM	ENSMUSG00000097760.3	ENSMUST00000188203.2	1006	1	46	-3238	27	3238	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATCATTGTAAACACAA	NA	False	NA	NA	False	AAAAAG	-38	NA	132404756	132400558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132400600_132404800
ES.13270.1	chr16	+	1760	2	FSM	ENSMUSG00000059280.5	ENSMUST00000075371.5	759	2	-1001	0	-1001	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGTCTGGCTGGTTTG	56	False	NA	NA	False	ATTAAA	-14	NA	17797290	17799137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17798475_17798561
ES.13271.1	chr16	+	153	1	Intergenic	novelGene_11126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	17819357	17819510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17819400_17819500
ES.13271.2	chr16	+	1128	2	Intergenic	novelGene_11127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGGAAGGTGTTGTCT	NA	False	NA	NA	False	AATAAA	-35	NA	17819369	17820678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17819478_17819658
ES.13272.1	chr16	+	5250	1	Intergenic	novelGene_11128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTCTTGTGGGTGA	NA	False	NA	13	True	NA	NA	NA	17829605	17834855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17829600_17834900
ES.13272.2	chr16	+	84	1	Intergenic	novelGene_11129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTGTTTCTTGTGGGT	NA	False	NA	14	True	NA	NA	NA	17829606	17829690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17829600_17829700
ES.13272.3	chr16	+	1061	2	Intergenic	novelGene_11130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCTGTTTCTTGTGG	NA	False	NA	9	True	NA	NA	NA	17829606	17834851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17829831_17834014
ES.13272.4	chr16	+	721	1	Intergenic	novelGene_11131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAACCAGGGACACCTG	NA	False	NA	NA	False	NA	NA	NA	17829607	17830328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_17829600_17830300
ES.13273.1	chr16	+	1256	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	-169	-1	-169	1	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTCCTAGTGACTCTG	NA	False	NA	31	True	AATAAA	-37	NA	17884097	17889228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ES.13273.10	chr16	+	3145	5	NNC	ENSMUSG00000003531.16	novel	1050	5	NA	NA	1	1506	intron_retention	FALSE	canonical	0	0	junction_3	190.386941516481	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATTGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17884307	17891002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17884464_17884559_17884721_17887287_17887389_17887629_17888096_17888741
ES.13273.11	chr16	+	2936	4	ISM	ENSMUSG00000003531.16	ENSMUST00000076757.12	894	5	1285	-1816	1	1526	3prime_fragment	FALSE	canonical	3	350	junction_2	42.6796855137846	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTACTAGGACTTTTC	NA	False	NA	NA	False	NA	NA	NA	17884307	17891022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17884721_17887287_17887389_17887954_17888096_17888741
ES.13273.13	chr16	+	851	4	NIC	ENSMUSG00000003531.16	novel	1050	5	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	185.986259946505	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTGTGCTACCTAG	NA	False	NA	10	True	AATAAA	-16	NA	17884329	17889207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17884464_17887287_17887389_17887945_17888096_17888741
ES.13273.14	chr16	+	3939	2	NIC	ENSMUSG00000003531.16	novel	641	3	NA	NA	-926	1506	intron_retention	FALSE	canonical	3	442	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATTGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17886417	17891002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_17888096_17888741
ES.13273.2	chr16	+	1184	4	FSM	ENSMUSG00000003531.16	ENSMUST00000155387.8	1415	4	-38	269	7	0	multi-exon	FALSE	canonical	3	112	junction_2	154.861228201251	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	False	NA	30	True	AATAAA	-36	NA	17884273	17889227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17884721_17887287_17887389_17887945_17888096_17888741
ES.13273.3	chr16	+	1072	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	-16	-6	-16	1	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTCCTAGTGACTCTG	NA	False	NA	31	True	AATAAA	-37	NA	17884290	17889228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
ES.13273.4	chr16	+	4689	2	NNC	ENSMUSG00000003531.16	novel	894	5	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTGTGCTACCTA	NA	False	NA	9	True	AATAAA	-15	NA	17884291	17889206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17885489_17885714
ES.13273.5	chr16	+	1136	4	ISM	ENSMUSG00000003531.16	ENSMUST00000076757.12	894	5	1272	-3	-12	2	3prime_fragment	FALSE	canonical	3	350	junction_2	42.6796855137846	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGCTACCTAGGA	NA	False	NA	12	True	AATAAA	-18	NA	17884294	17889209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_17884721_17887287_17887389_17887954_17888096_17888741
ES.13273.8	chr16	+	1049	5	NNC	ENSMUSG00000003531.16	novel	1050	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	187.78894403026	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTGTGCTACC	NA	False	NA	7	True	AATAAA	-13	NA	17884307	17889204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_17884464_17884559_17884721_17887287_17887389_17887927_17888096_17888741
ES.13273.9	chr16	+	2829	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	1	-1780	1	1506	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATTGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17884307	17891002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
ES.13274.1	chr16	-	2265	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	120	1	-9	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8063	False	NA	-1	True	AATAAA	-19	NA	17907036	17889589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.10	chr16	-	3851	11	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	2	10	junction_7	38.1288604602865	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17895455_17895654_17895748_17897050_17897133_17897775_17897851_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.11	chr16	-	2832	12	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	102	junction_5	11.3705433554579	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8070	False	NA	-5	True	AATAAA	-15	NA	17907029	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.12	chr16	-	2303	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.2363608102087	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891414_17891729_17895307_17895455_17895642_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.13	chr16	-	4133	11	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	3	102	junction_5	11.8220133649053	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17897133_17897775_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.14	chr16	-	2401	14	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.2010680853979	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895885_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906739
ES.13274.15	chr16	-	5806	11	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	2	10	junction_8	38.214656874032	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897851_17898029_17898940_17899394_17902620_17906751
ES.13274.16	chr16	-	7299	9	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_4	57.7321400954442	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17895455_17895642_17895748_17897050_17897133_17897775_17897851_17898029_17902620_17906751
ES.13274.17	chr16	-	5245	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_5	37.5462677535627	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895642_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17902620_17906751
ES.13274.18	chr16	-	3372	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_6	55.5479647591961	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8072	False	NA	-5	True	AATAAA	-15	NA	17907027	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895885_17897050_17897133_17897775_17897851_17898029_17898147_17898326_17898940_17899394_17899430_17901820_17902620_17906751
ES.13274.2	chr16	-	2929	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	61.1505428339675	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8072	False	NA	-1	True	AATAAA	-19	NA	17907027	17889589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17890690_17890779_17891418_17891518_17894105_17894282_17895307_17895455_17895642_17895748_17897050_17897133_17897775_17897851_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.20	chr16	-	2636	5	ISM	ENSMUSG00000003526.13	ENSMUST00000141635.8	863	7	187	-396	141	-4	intron_retention	FALSE	canonical	3	128	junction_4	7.66077672302228	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	17896945	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307
ES.13274.21	chr16	-	5235	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	102	junction_5	13.6798716693136	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATCACCTTTCTCTTGG	8070	False	NA	-5	True	AATAAA	-15	NA	17907029	17889593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17902620_17906751
ES.13274.22	chr16	-	3952	12	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-5	intron_retention	FALSE	canonical	3	102	junction_5	12.896921280383	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCATCACCTTTCTCTTG	8072	False	NA	-6	True	AATAAA	-14	NA	17907027	17889594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17897133_17897775_17897856_17898029_17898147_17898326_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.23	chr16	-	2785	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_6	37.4228836705861	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCATCACCTTTCTCTT	8072	False	NA	-7	True	AATAAA	-13	NA	17907027	17889595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895885_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.24	chr16	-	6264	10	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-6	intron_retention	FALSE	canonical	3	102	junction_5	12.1847911677824	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCATCACCTTTCTCTT	8072	False	NA	-7	True	AATAAA	-13	NA	17907027	17889595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17902620_17906751
ES.13274.25	chr16	-	4818	10	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-32	-6	intron_retention	FALSE	canonical	0	0	junction_5	42.1241551184643	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCATCACCTTTCTCTT	8040	False	NA	-7	True	AATAAA	-13	NA	17907059	17889595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895642_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.26	chr16	-	2262	14	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.2063448622479	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCATCACCTTTCTCTT	8072	False	NA	-7	True	AATAAA	-13	NA	17907027	17889595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906739
ES.13274.27	chr16	-	3471	11	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-6	intron_retention	FALSE	canonical	3	102	junction_5	11.4808536267997	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCATCACCTTTCTCTT	8072	False	NA	-7	True	AATAAA	-13	NA	17907027	17889595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.28	chr16	-	2032	13	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-2328	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.9463283153656	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTCATCACCTTTCT	8817	False	NA	-10	True	AATAAA	-10	NA	17902511	17889598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895885_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898424_17898789_17898940_17899394_17899430_17902410
ES.13274.29	chr16	-	4984	1	FSM	ENSMUSG00000003526.13	ENSMUST00000232502.2	4943	1	-23	-18	-3	18	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGAGTGGTGTAGTC	8069	False	NA	NA	False	NA	NA	NA	17907030	17902046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17902000_17907000
ES.13274.3	chr16	-	2840	12	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	50.1399693749968	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8073	False	NA	-1	True	AATAAA	-19	NA	17907026	17889589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895642_17895748_17897050_17897133_17897775_17897851_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.30	chr16	-	490	1	FSM	ENSMUSG00000003526.13	ENSMUST00000232502.2	4943	1	-20	4473	0	-4470	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACATGTACTATTTGTA	8072	False	NA	NA	False	AATAAA	-11	NA	17907027	17906537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_17906500_17907000
ES.13274.4	chr16	-	6091	11	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_5	52.1110352996369	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8076	False	NA	-3	True	AATAAA	-17	NA	17907023	17889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895642_17895748_17897050_17897133_17897775_17897851_17898029_17898147_17898326_17902620_17906751
ES.13274.5	chr16	-	2164	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.2566176075547	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8069	False	NA	-3	True	AATAAA	-17	NA	17907030	17889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.6	chr16	-	3028	14	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	36.2063448622479	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8073	False	NA	-3	True	AATAAA	-17	NA	17907026	17889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17905976
ES.13274.7	chr16	-	3446	10	ISM	ENSMUSG00000003526.13	ENSMUST00000123969.3	2043	13	-70	3	-70	-2	intron_retention	FALSE	canonical	3	102	junction_5	14.2785343509016	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	NA	False	NA	-3	True	AATAAA	-17	NA	17900253	17889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326
ES.13274.8	chr16	-	3038	12	NNC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_3	49.3926752022642	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCACCTTTCTCTTGGTA	8072	False	NA	-3	True	AATAAA	-17	NA	17907027	17889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_17890228_17890313_17890403_17891418_17891729_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897851_17898029_17898940_17899394_17899430_17902410_17902620_17906751
ES.13274.9	chr16	-	3299	2	ISM	ENSMUSG00000003526.13	ENSMUST00000141635.8	863	7	4155	-397	4109	-3	intron_retention	FALSE	canonical	3	134	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCACCTTTCTCTTGGT	1134	False	NA	-4	True	AATAAA	-16	NA	17892977	17889592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_17890228_17890313
ES.13275.1	chr16	+	4265	3	Antisense	novelGene_ENSMUSG00000003526.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTGAGTCCAAGTCAC	8587	False	NA	NA	False	NA	NA	NA	17907247	17915415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17907368_17910949_17911119_17911439
ES.13275.2	chr16	+	4573	2	Antisense	novelGene_ENSMUSG00000003526.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGAGTCCAAGTCACC	8601	False	NA	NA	False	NA	NA	NA	17907261	17915416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_17907368_17910949
ES.13276.1	chr16	-	136	1	Intergenic	novelGene_11132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9813	False	NA	NA	False	NA	NA	NA	17915967	17915831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_17915800_17916000
ES.13277.1	chr16	+	2714	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	-348	1	-144	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGGTGAACCAGAG	NA	False	NA	7	True	AATAAA	-21	NA	18066398	18071365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.10	chr16	+	3607	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	20	-1260	20	-10	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAACAGATGGGCTTGG	289	False	NA	NA	False	CATAAA	-13	NA	18066766	18072626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.12	chr16	+	2273	12	NNC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.685203040053	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	299	False	NA	4	True	AATAAA	-18	NA	18066776	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069295_18069412_18069525_18070005_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.13	chr16	+	2386	11	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	52	1	intron_retention	FALSE	canonical	3	222	junction_1	22.6680391741324	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	321	False	NA	5	True	AATAAA	-19	NA	18066798	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.14	chr16	+	2904	8	NIC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-31	0	intron_retention	FALSE	canonical	3	257	junction_4	13.2449451274277	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	357	False	NA	4	True	AATAAA	-18	NA	18066834	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067898_18068317_18068427_18068683_18069135_18069222_18069339_18069412_18069525_18069989_18070342_18070582_18070885_18070963
ES.13277.15	chr16	+	2730	9	NNC	ENSMUSG00000022721.20	novel	2235	12	NA	NA	-31	-1	intron_retention	FALSE	canonical	0	0	junction_1	122.681943964872	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTCTGTGGTGAACC	357	False	NA	3	True	AATAAA	-17	NA	18066834	18071361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18067121_18067349_18067898_18068317_18068427_18068635_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070885_18070963
ES.13277.16	chr16	+	3798	4	NIC	ENSMUSG00000022721.20	novel	3520	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	222	junction_1	31.8991466273873	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	359	False	NA	4	True	AATAAA	-18	NA	18066836	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18069339_18069412
ES.13277.17	chr16	+	3878	3	NNC	ENSMUSG00000022721.20	novel	2971	6	NA	NA	-29	1	intron_retention	FALSE	canonical	0	0	junction_1	150	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	359	False	NA	5	True	AATAAA	-19	NA	18066836	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18067121_18067349_18067898_18068317
ES.13277.18	chr16	+	2474	11	NNC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-25	0	intron_retention	FALSE	canonical	2	12	junction_3	79.0642776479998	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	363	False	NA	4	True	AATAAA	-18	NA	18066840	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18067898_18068317_18068427_18068683_18068837_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.19	chr16	+	2708	8	NNC	ENSMUSG00000022721.20	novel	3520	11	NA	NA	-11	0	intron_retention	FALSE	canonical	2	12	junction_4	92.382302395634	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	377	False	NA	4	True	AATAAA	-18	NA	18066854	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068837_18069019_18069135_18069222_18069525_18069989_18070113_18070265
ES.13277.2	chr16	+	2159	10	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	85.4609866951791	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	242	False	NA	4	True	AATAAA	-18	NA	18066719	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.20	chr16	+	2722	8	NIC	ENSMUSG00000022721.20	novel	2553	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	222	junction_1	23.5597373603739	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGGTGAACCAGAG	382	False	NA	7	True	AATAAA	-21	NA	18066859	18071365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18069525_18069989_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.21	chr16	+	3594	4	ISM	ENSMUSG00000022721.20	ENSMUST00000059696.12	2082	9	-4	0	-4	0	intron_retention	FALSE	canonical	3	222	junction_1	31.8747549010185	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	384	False	NA	8	True	AATAAA	-22	NA	18066861	18071366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683
ES.13277.22	chr16	+	2332	11	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	222	junction_1	22.0909483725801	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	389	False	NA	5	True	AATAAA	-19	NA	18066866	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070885_18070963
ES.13277.23	chr16	+	2363	11	NIC	ENSMUSG00000022721.20	novel	2235	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_1	80.4422774416538	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	390	False	NA	4	True	AATAAA	-18	NA	18066867	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.24	chr16	+	2542	10	NIC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	4	1	intron_retention	FALSE	canonical	3	250	junction_8	16.3465554947582	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	399	False	NA	5	True	AATAAA	-19	NA	18066876	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.25	chr16	+	2610	9	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	21	0	intron_retention	FALSE	canonical	3	222	junction_1	25.1492420362921	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	416	False	NA	4	True	AATAAA	-18	NA	18066893	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070700_18070787
ES.13277.26	chr16	+	2614	9	NIC	ENSMUSG00000022721.20	novel	3520	11	NA	NA	26	0	intron_retention	FALSE	canonical	3	222	junction_1	23.9256661349272	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	421	False	NA	4	True	AATAAA	-18	NA	18066898	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070885_18070963
ES.13277.27	chr16	+	3297	3	NIC	ENSMUSG00000022721.20	novel	2553	9	NA	NA	-307	1	intron_retention	FALSE	canonical	3	271	junction_2	14.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	1090	False	NA	5	True	AATAAA	-19	NA	18067567	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067898_18068317_18070885_18070963
ES.13277.28	chr16	+	2318	4	NIC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	-562	0	intron_retention	FALSE	canonical	3	250	junction_2	22.6617641757114	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	2246	False	NA	4	True	AATAAA	-18	NA	18068723	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18068866_18069019_18070700_18070787_18070885_18070963
ES.13277.3	chr16	+	2523	11	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	222	junction_1	23.0902576858726	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATTTCTGTGGTGAA	259	False	NA	1	True	AATAAA	-15	NA	18066736	18071359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.4	chr16	+	2607	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	194	4	1	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	259	False	NA	4	True	AATAAA	-18	NA	18066736	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.6	chr16	+	2403	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	-171	3	8	1	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTGTGGTGAACCAG	277	False	NA	5	True	AATAAA	-19	NA	18066754	18071363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13277.7	chr16	+	3078	6	FSM	ENSMUSG00000022721.20	ENSMUST00000147273.2	2971	6	-117	10	9	0	multi-exon	FALSE	canonical	3	222	junction_1	26.1564523588349	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	278	False	NA	4	True	AATAAA	-18	NA	18066755	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18069525_18069989_18070113_18070265
ES.13277.8	chr16	+	2488	11	NIC	ENSMUSG00000022721.20	novel	2235	12	NA	NA	13	0	intron_retention	FALSE	canonical	3	14	junction_1	80.4627242889526	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGGTGAACCAGAG	282	False	NA	7	True	AATAAA	-21	NA	18066759	18071365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070885_18070963
ES.13277.9	chr16	+	2731	10	NIC	ENSMUSG00000022721.20	novel	2805	11	NA	NA	20	0	intron_retention	FALSE	canonical	3	250	junction_8	14.0457805271649	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCTGTGGTGAACCA	289	False	NA	4	True	AATAAA	-18	NA	18066766	18071362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18067898_18068317_18068427_18068683_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ES.13278.1	chr16	+	176	1	Intergenic	novelGene_11133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	18078582	18078758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18078600_18078800
ES.13279.1	chr16	+	1719	1	Antisense	novelGene_ENSMUSG00000022718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18095312	18097031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_18095300_18097000
ES.1328.1	chr1	-	8116	14	ISM	ENSMUSG00000053024.15	ENSMUST00000186487.7	7334	22	17451	-2350	-2046	-1	3prime_fragment	FALSE	canonical	1	2	junction_13	3.44526087331672	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTCTCGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	132453177	132437165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044
ES.1328.11	chr1	-	5400	23	FSM	ENSMUSG00000053024.15	ENSMUST00000086521.11	7177	23	39	1738	-10	-1728	multi-exon	FALSE	canonical	1	1	junction_16	4.01057486450529	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCATCTCACATACAAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	132470638	132441257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ES.1328.2	chr1	-	7130	23	FSM	ENSMUSG00000053024.15	ENSMUST00000086521.11	7177	23	53	-6	4	2	multi-exon	FALSE	canonical	1	1	junction_16	4.01057486450529	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTCTCACCTCATTAA	NA	False	NA	6	True	AATAAA	-37	NA	132470624	132439513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ES.1328.4	chr1	-	4901	8	ISM	ENSMUSG00000053024.15	ENSMUST00000190601.7	7236	22	21511	-10	2039	0	3prime_fragment	FALSE	canonical	0	0	junction_6	4.7723694538543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGCACTTCTCACCT	NA	False	NA	0	True	AATAAA	-31	NA	132449092	132439519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446576_132446906_132446978_132448876
ES.1328.5	chr1	-	7004	23	NNC	ENSMUSG00000053024.15	novel	7177	23	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.99896680871323	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACTGCACTTCTCACC	NA	False	NA	-1	True	AATAAA	-30	NA	132470559	132439520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132443376_132443758_132443874_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ES.1328.7	chr1	-	5353	12	NNC	ENSMUSG00000053024.15	novel	7334	22	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	3.91014784865574	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGCGGCTGGAAGCAC	NA	False	NA	-14	True	AATAAA	-17	NA	132451133	132439533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449597_132450070_132450192_132450672_132450849_132451095
ES.1328.8	chr1	-	7449	22	NNC	ENSMUSG00000053024.15	novel	7177	23	NA	NA	7	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	4.62812069135917	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGCGGCTGGAAGCAC	NA	False	NA	-14	True	AATAAA	-17	NA	132470596	132439533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132443928_132444261_132444371_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456361_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ES.1328.9	chr1	-	3935	9	NNC	ENSMUSG00000053024.15	novel	7236	22	NA	NA	1609	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5.23808170993924	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCCTGGGCGGCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	132449522	132439538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132442431_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446576_132446906_132446978_132448876_132449027_132449458
ES.13280.1	chr16	-	2972	13	Fusion	ENSMUSG00000116557.2_ENSMUSG00000060166.7	novel	3257	4	NA	NA	-5	-924	multi-exon	FALSE	canonical	0	0	junction_1	30.7908491095794	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTACAGCCTCTCTTCC	NA	False	NA	NA	False	AATAGA	-18	NA	18053005	18028475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18028768_18028943_18029063_18032485_18032799_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.10	chr16	-	4458	8	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	19	-711	intron_retention	FALSE	canonical	3	49	junction_4	11.7090580669978	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGAGCCTTTCCTTGGG	NA	False	NA	-1	True	AAAAAG	-9	NA	18052981	18040092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046621_18052770
ES.13280.100	chr16	-	3389	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCCGAGATTGCAGT	NA	False	NA	-10	True	AATAAA	-22	NA	18107104	18072799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.101	chr16	-	3452	12	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	4	intron_retention	FALSE	canonical	0	0	junction_3	59.3364130813059	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCCGAGATTGCAGT	NA	False	NA	-10	True	AATAAA	-22	NA	18102424	18072799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18073470_18074535_18074650_18076057_18076186_18077425_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.102	chr16	-	7285	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	18	1	intron_retention	FALSE	canonical	0	0	junction_3	71.4978379281665	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCTTCCGAGATTGC	NA	False	NA	-13	True	AATAAA	-19	NA	18107077	18072802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077425_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18102964
ES.13280.104	chr16	-	3312	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	75.624475036127	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATACTCTTCCGAGATT	NA	False	NA	-15	True	AATAAA	-17	NA	18107097	18072804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
ES.13280.105	chr16	-	4812	13	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_2	82.7136962996791	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATACTCTTCCGAGAT	NA	False	NA	-16	True	AATAAA	-16	NA	18102424	18072805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18073470_18074535_18074650_18074767_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.107	chr16	-	7372	2	NIC	ENSMUSG00000022718.13	novel	1246	6	NA	NA	1401	-832	intron_retention	FALSE	canonical	3	191	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGCCTAGGTAGAACT	7429	False	NA	NA	False	NA	NA	NA	18081732	18074137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18077520_18077742
ES.13280.108	chr16	-	8194	8	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	4	-832	intron_retention	FALSE	canonical	3	159	junction_6	17.5045183671333	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGCCTAGGTAGAACT	NA	False	NA	NA	False	NA	NA	NA	18102423	18074137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477
ES.13280.109	chr16	-	3762	3	NIC	ENSMUSG00000022718.13	novel	1246	6	NA	NA	3578	-857	intron_retention	FALSE	canonical	3	191	junction_2	1.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9606	False	NA	NA	False	AAGAAA	-31	NA	18079555	18074162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18074650_18076057_18077520_18077742
ES.13280.11	chr16	-	4111	7	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	19	-713	intron_retention	FALSE	canonical	3	56	junction_1	8.05536398239638	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	NA	False	NA	-3	True	AAAAAG	-7	NA	18052981	18040094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045743_18045922_18046621_18052770
ES.13280.110	chr16	-	4395	10	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	-857	intron_retention	FALSE	canonical	3	159	junction_7	15.6686365979783	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-31	NA	18102424	18074162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18074650_18076057_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.111	chr16	-	5803	9	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	-857	intron_retention	FALSE	canonical	3	159	junction_6	16.5435032565657	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-31	NA	18102424	18074162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.112	chr16	-	4097	1	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-3266	-858	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-30	NA	18078260	18074163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18074200_18078300
ES.13280.113	chr16	-	5384	6	NNC	ENSMUSG00000022718.13	novel	3436	12	NA	NA	7	-859	intron_retention	FALSE	canonical	3	15	junction_3	70.198005669677	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	18095923	18074164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18074650_18076057_18077520_18077742_18077844_18087451_18090668_18095029_18095129_18095902
ES.13280.114	chr16	-	2947	11	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	6	5068	6	557	5prime_fragment	FALSE	canonical	3	133	junction_10	23.0800779894696	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAGTGAAGATTAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	18107104	18076879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.12	chr16	-	3393	11	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-16	-713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.9221098727421	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	NA	False	NA	-3	True	AAAAAG	-7	NA	18053016	18040094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046502_18046612_18052770
ES.13280.13	chr16	-	3464	12	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-17	-713	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.5056718418415	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	NA	False	NA	-3	True	AAAAAG	-7	NA	18053017	18040094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044708_18044766_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.15	chr16	-	3916	11	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	26	-713	intron_retention	FALSE	canonical	1	2	junction_1	28.0364049050516	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	NA	False	NA	-3	True	AAAAAG	-7	NA	18052974	18040094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18042549_18042841_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045748_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.16	chr16	-	4261	16	Fusion	ENSMUSG00000060166.7_ENSMUSG00000005732.15	novel	4868	11	NA	NA	-22	-713	multi-exon	FALSE	canonical	0	0	junction_10	4898.24235142906	2060	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	7776	False	NA	-3	True	AAAAAG	-7	NA	18065953	18040094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18057894_18058058_18058757_18058824_18059252_18059738_18063064_18063223_18065152_18065290_18065861
ES.13280.17	chr16	-	3498	6	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-3015	-727	intron_retention	FALSE	canonical	2	3	junction_5	27.1440601237177	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18045561	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045493
ES.13280.18	chr16	-	3992	15	Fusion	ENSMUSG00000060166.7_ENSMUSG00000005732.15	novel	4868	11	NA	NA	-30	-727	intron_retention	FALSE	non_canonical	0	0	junction_6	5731.86402926657	2060	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	7189	False	NA	-17	True	NA	NA	NA	18066540	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18041242_18042081_18043080_18044322_18044631_18044916_18045053_18045218_18045311_18045639_18045730_18045922_18046096_18046177_18046336_18046498_18046621_18057894_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.19	chr16	-	4062	9	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	1	-727	intron_retention	FALSE	canonical	0	0	junction_7	30.5120365593646	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18052999	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045748_18045922_18046096_18046498_18046621_18052770
ES.13280.2	chr16	-	4946	10	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	49	junction_5	11.2095638179036	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGGCACTGCCCAGCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	18052999	18038619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046336_18046498_18046621_18052770
ES.13280.20	chr16	-	3709	10	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-4	-727	intron_retention	FALSE	canonical	3	49	junction_5	9.77651506998175	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18053004	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.22	chr16	-	5135	6	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-4061	-727	intron_retention	FALSE	canonical	0	0	junction_5	25.7945730726446	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18046607	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046498
ES.13280.23	chr16	-	4445	5	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	34	-727	intron_retention	FALSE	canonical	3	56	junction_1	9.65336728815391	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18052966	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18043080_18044322_18045743_18045922_18046621_18052770
ES.13280.24	chr16	-	3329	11	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	39	-727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	22.4953328492823	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18052961	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045735_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.25	chr16	-	3427	10	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	26	-727	intron_retention	FALSE	canonical	3	49	junction_4	10.8400264224542	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAATCATTT	NA	False	NA	-17	True	NA	NA	NA	18052974	18040108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18043080_18044322_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.26	chr16	-	3316	1	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	58	-10245	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTAGGTGCTCAGAGCC	NA	False	NA	NA	False	NA	NA	NA	18052942	18049626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18049600_18052900
ES.13280.27	chr16	-	1241	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	-151	-5	-151	5	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGGCTATGTGAGGGG	6982	False	NA	4	True	AATAAA	-27	NA	18066747	18057642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.3	chr16	-	3740	3	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-2411	-710	intron_retention	FALSE	canonical	3	56	junction_1	7	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18044957	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18041242_18042081_18044631_18044916
ES.13280.31	chr16	-	1520	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-80	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	5048.94469765713	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTGACAAGGCTATGT	7053	False	NA	-2	True	AATAAA	-21	NA	18066676	18057648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059252_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.32	chr16	-	887	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	4915.69778871728	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTGACAAGGCTATGT	7172	False	NA	-2	True	AATAAA	-21	NA	18066557	18057648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058058_18058757_18058824_18059608_18059738_18065152_18065290_18066411
ES.13280.33	chr16	-	1206	6	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	413	junction_5	4809.89758726732	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTGACAAGGCTATGT	7432	False	NA	-2	True	AATAAA	-21	NA	18066297	18057648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18065990
ES.13280.34	chr16	-	1204	7	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5874.87413813172	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTGACAAGGCTATGT	7172	False	NA	-2	True	AATAAA	-21	NA	18066557	18057648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18063706_18063866_18065152_18065290_18066411
ES.13280.35	chr16	-	1752	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	31	-2	intron_retention	FALSE	canonical	3	10558	junction_3	1668.53848846828	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7164	False	NA	-3	True	AATAAA	-20	NA	18066565	18057649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.36	chr16	-	2147	5	ISM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	58	2	-28	-2	intron_retention	FALSE	canonical	3	10558	junction_4	1732.32233937567	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7191	False	NA	-3	True	AATAAA	-20	NA	18066538	18057649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152
ES.13280.37	chr16	-	1037	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	3	436	junction_1	4886.56895582166	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTGACAAGGCTATG	7173	False	NA	-3	True	AATAAA	-20	NA	18066556	18057649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058052_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.38	chr16	-	1036	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5052.91725639754	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAGCTGACAAGGCTA	7163	False	NA	-5	True	AATAAA	-18	NA	18066566	18057651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058772_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.39	chr16	-	4353	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-31	-4	intron_retention	FALSE	canonical	3	10558	junction_3	574.731241538165	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAGCTGACAAGGCTA	7188	False	NA	-5	True	AATAAA	-18	NA	18066541	18057651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058058_18058757_18058824_18059608_18063223_18065152_18065290_18066411
ES.13280.4	chr16	-	3456	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	-63	1475	-63	-710	multi-exon	FALSE	canonical	3	49	junction_5	10.6494131293701	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18053063	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.40	chr16	-	3528	18	Fusion	ENSMUSG00000005732.15_ENSMUSG00000022718.13	novel	3410	8	NA	NA	15	-4	multi-exon	TRUE	canonical	0	0	junction_5	5003.22024604652	2226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAGCTGACAAGGCTA	NA	False	NA	-5	True	AATAAA	-18	NA	18107080	18057651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.41	chr16	-	906	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	33	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	5517.35286958338	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGGACCAGCTGACAA	7166	False	NA	-10	True	AATAAA	-13	NA	18066563	18057656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18066411
ES.13280.42	chr16	-	964	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5052.91725639754	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGACCAGCTGACA	7215	False	NA	-11	True	AATAAA	-12	NA	18066514	18057657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058786_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.44	chr16	-	1062	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-21	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4477.6061461455	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACCTGGACCAGCTGA	7198	False	NA	-13	True	AATAAA	-10	NA	18066531	18057659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059608_18059792_18063064_18063223_18065152_18065290_18066411
ES.13280.45	chr16	-	983	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5059.65984627425	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	7211	False	NA	-19	True	AATAAA	-4	NA	18066518	18057665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059614_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.46	chr16	-	1102	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	-113	96	-113	-78	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATGTACTGTGCTAA	7020	False	NA	65	True	NA	NA	NA	18066709	18057743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.47	chr16	-	2983	20	Fusion	ENSMUSG00000005732.15_ENSMUSG00000022718.13	novel	4320	14	NA	NA	309	-170	multi-exon	FALSE	canonical	0	0	junction_5	4817.82530623937	2226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTTTTTTGTTTTGT	NA	False	NA	-27	True	TATAAA	-20	NA	18102090	18057835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18071936_18072012_18073384_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560
ES.13280.48	chr16	-	1643	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-47	-171	intron_retention	FALSE	canonical	3	10558	junction_3	1668.53848846828	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTGTTTTTTTGTTTTG	7086	False	NA	-28	True	TATAAA	-19	NA	18066643	18057836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.49	chr16	-	882	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	7	-172	at_least_one_novel_splicesite	FALSE	canonical	3	436	junction_1	4886.56895582166	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTGTTTTTTTGTTTT	7140	False	NA	-29	True	TATAAA	-18	NA	18066589	18057837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058052_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.5	chr16	-	4247	10	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	0	-710	intron_retention	FALSE	non_canonical	0	0	junction_8	23.4994089760194	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18053000	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046350_18046498_18046621_18052770
ES.13280.50	chr16	-	4189	5	NIC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	30	-175	intron_retention	FALSE	canonical	3	10558	junction_3	574.731241538165	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGTTGTTTTTTTGT	7163	False	NA	31	True	TATAAA	-15	NA	18066566	18057840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18058058_18058757_18058824_18059608_18063223_18065152_18065290_18066411
ES.13280.51	chr16	-	825	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	34	-177	at_least_one_novel_splicesite	FALSE	canonical	2	83	junction_5	4935.04435643693	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGTTGTTTTTTT	7167	False	NA	29	True	TATAAA	-13	NA	18066562	18057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065259_18066411
ES.13280.52	chr16	-	798	6	NNC	ENSMUSG00000005732.15	novel	923	6	NA	NA	-23	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4966.57651103856	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGTTGTTTTTTT	7775	False	NA	29	True	TATAAA	-13	NA	18065954	18057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18065861
ES.13280.54	chr16	-	1759	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	-28	-177	intron_retention	FALSE	canonical	2	4	junction_2	6251.41633871877	1944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGTTGTTTTTTT	7191	False	NA	29	True	TATAAA	-13	NA	18066538	18057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18058824_18059252_18059480_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.55	chr16	-	1716	5	ISM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	296	195	-2	-177	3prime_fragment	FALSE	canonical	3	10558	junction_4	1732.32233937567	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGTTGTTTTTTT	7429	False	NA	29	True	TATAAA	-13	NA	18066300	18057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152
ES.13280.56	chr16	-	2043	16	Fusion	ENSMUSG00000005732.15_ENSMUSG00000022718.13	novel	3410	8	NA	NA	-428	-178	multi-exon	FALSE	canonical	0	0	junction_5	5231.81379213324	2226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTCAGGTTGTTTTTT	NA	False	NA	28	True	TATAAA	-12	NA	18098538	18057843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477
ES.13280.58	chr16	-	981	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	-93	197	-93	-179	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTCAGGTTGTTTTT	7040	False	NA	27	True	TATAAA	-11	NA	18066689	18057844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ES.13280.6	chr16	-	4727	5	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	22	-710	intron_retention	FALSE	canonical	0	0	junction_2	33.0785051052795	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18052978	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18043080_18044322_18045053_18045639_18045743_18045922_18046621_18052770
ES.13280.60	chr16	-	5964	13	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	5000	-2238	289	2238	3prime_fragment	FALSE	canonical	3	159	junction_9	20.9528239942337	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGGCTTCCCTCCCTC	NA	False	NA	NA	False	TATAAA	-13	NA	18102110	18069573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560
ES.13280.61	chr16	-	6575	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	27	2234	intron_retention	FALSE	canonical	3	12	junction_6	65.4459194094402	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTACTGGCTTCCCTC	NA	False	NA	NA	False	TATAAA	-9	NA	18107068	18069577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.62	chr16	-	5772	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	-22	-1430	-22	1430	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTACTGTTCCAGATGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	18107132	18070381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.63	chr16	-	3953	13	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	5246	-473	535	473	3prime_fragment	FALSE	canonical	3	159	junction_9	20.9528239942337	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATCTGTCTGTCCCATC	NA	False	NA	NA	False	AGTAAA	-19	NA	18101864	18071338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560
ES.13280.64	chr16	-	4369	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	-49	0	-49	0	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107159	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.65	chr16	-	4373	1	NIC	ENSMUSG00000116925.2	novel	608	5	NA	NA	1	-8733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18076184	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18071800_18076200
ES.13280.67	chr16	-	4486	15	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	27	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_14	69.3425392894004	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107068	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18102964_18103173_18106966
ES.13280.68	chr16	-	4203	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	54.4038188935674	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107091	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102235_18102332_18102561_18106966
ES.13280.7	chr16	-	3489	4	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-3019	-710	intron_retention	FALSE	canonical	0	0	junction_2	34.4125300177453	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18045565	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18043080_18044322_18044433_18044916_18045053_18045310
ES.13280.70	chr16	-	4239	14	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	51.7107338953916	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107094	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
ES.13280.71	chr16	-	4558	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	205	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.1661288758594	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18106829	18071811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106447
ES.13280.73	chr16	-	4342	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.2540126792594	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18107119	18071813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096020_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.76	chr16	-	5015	13	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	288	-2	intron_retention	FALSE	canonical	3	12	junction_5	69.1834818917541	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18102111	18071813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560
ES.13280.77	chr16	-	4430	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	65.2363051544466	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18107116	18071813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18073575_18073682_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.78	chr16	-	5520	13	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	10	-2	intron_retention	FALSE	canonical	3	133	junction_12	26.3390025543025	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTGGTTTCTTTCTTC	NA	False	NA	-2	True	CATAAA	-15	NA	18107085	18071813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18073470_18074535_18074650_18076057_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.79	chr16	-	10345	11	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	-3	intron_retention	FALSE	canonical	3	159	junction_8	20.7422274599427	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCTGGTTTCTTTCTT	NA	False	NA	-3	True	CATAAA	-14	NA	18107092	18071814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18073470_18074535_18074650_18076057_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.8	chr16	-	3460	11	NNC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-53	-710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	22.4953328492823	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGCCTTTCCTTGGGC	NA	False	NA	0	True	AAAAAG	-10	NA	18053053	18040091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045757_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.80	chr16	-	4489	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-109	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCTGGTTTCTTTCTT	NA	False	NA	-3	True	CATAAA	-14	NA	18107219	18071814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.81	chr16	-	5650	13	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	14	junction_12	53.6332064427751	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGCTGGTTTCTTTCTT	NA	False	NA	-3	True	CATAAA	-14	NA	18107100	18071814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18073470_18074535_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
ES.13280.82	chr16	-	6830	13	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_2	57.7900294168466	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGCTGGTTTCTTTCT	NA	False	NA	-4	True	CATAAA	-13	NA	18107107	18071815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18074767_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.83	chr16	-	4447	12	FSM	ENSMUSG00000093246.3_ENSMUSG00000022718.13	ENSMUST00000115633.3	3436	12	-25	-986	3	-6	multi-exon	FALSE	canonical	3	159	junction_9	19.9238218644403	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAATGGCTGGTTTCTTT	NA	False	NA	-6	True	CATAAA	-11	NA	18102424	18071817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.84	chr16	-	5455	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	26	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	55.8674466718601	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGAATGGCTGGTTTC	NA	False	NA	-9	True	CATAAA	-8	NA	18107069	18071820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076720_18076761_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.85	chr16	-	3971	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	8	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	54.4038188935674	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGGTAATGGTGGTAT	NA	False	NA	79	True	AAAACA	-18	NA	18107087	18072039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102235_18102332_18102561_18106966
ES.13280.86	chr16	-	6479	11	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	0	-228	intron_retention	FALSE	non_canonical	0	0	junction_2	58.8418218616657	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGGTAATGGTGGTAT	NA	False	NA	79	True	AAAACA	-18	NA	18102427	18072039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18074650_18076057_18076720_18076761_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.87	chr16	-	11336	10	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	27	-235	intron_retention	FALSE	canonical	3	159	junction_7	16.1848885471588	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAGCATATGGTAATG	NA	False	NA	72	True	AAAACA	-11	NA	18107068	18072046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.88	chr16	-	4022	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	-16	314	-16	-314	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGATTCTTTTCTGCC	NA	False	NA	-7	True	AAAAAG	-29	NA	18107126	18072125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.89	chr16	-	4181	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	-120	-322	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGGACACTTGATTCT	NA	False	NA	-15	True	AAAAAG	-21	NA	18107230	18072133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.9	chr16	-	4237	10	NIC	ENSMUSG00000060166.7	novel	4868	11	NA	NA	-5	-711	intron_retention	FALSE	canonical	3	49	junction_4	10.5771708509354	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGAGCCTTTCCTTGGG	NA	False	NA	-1	True	AAAAAG	-9	NA	18053005	18040092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ES.13280.90	chr16	-	3925	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	6	-328	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	51.9562856765356	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTAGACTTGGACACTT	NA	False	NA	-21	True	AAAAAG	-15	NA	18107104	18072139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107027
ES.13280.91	chr16	-	3653	2	FSM	ENSMUSG00000022718.13	ENSMUST00000144536.2	623	2	-1866	-1164	-1866	-330	multi-exon	FALSE	canonical	3	238	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTAGACTTGGACAC	NA	False	NA	-23	True	AAAAAG	-13	NA	18076860	18072141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535
ES.13280.92	chr16	-	3986	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	6	-330	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	75.7567603233789	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTAGACTTGGACAC	NA	False	NA	-23	True	AAAAAG	-13	NA	18107104	18072141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107027
ES.13280.93	chr16	-	4126	12	Fusion	ENSMUSG00000093246.3_ENSMUSG00000022718.13	novel	3436	12	NA	NA	3	-332	intron_retention	FALSE	canonical	0	0	junction_4	59.6946776978865	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGGTAGACTTGGAC	NA	False	NA	-25	True	AAAAAG	-11	NA	18102424	18072143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077737_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ES.13280.94	chr16	-	3558	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	5	757	5	235	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCATTTCAACAGAT	NA	False	NA	NA	False	AAGAAA	-18	NA	18107105	18072568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.95	chr16	-	3366	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	27	157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	55.8674466718601	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCATCTGTTCATCA	NA	False	NA	NA	False	GATAAA	-36	NA	18107068	18072646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18074535_18074650_18076057_18076122_18077425_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.97	chr16	-	3354	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	75.0477739000094	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCCGAGATTGCAGT	NA	False	NA	-10	True	AATAAA	-22	NA	18107091	18072799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18073470_18073575_18073682_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
ES.13280.98	chr16	-	3341	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	-9	988	-9	4	multi-exon	FALSE	canonical	3	133	junction_13	25.6660390814434	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCCGAGATTGCAGT	NA	False	NA	-10	True	AATAAA	-22	NA	18107119	18072799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ES.13280.99	chr16	-	3238	14	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	14	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	51.7107338953916	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTCCGAGATTGCAGT	NA	False	NA	-10	True	AATAAA	-22	NA	18107081	18072799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
ES.13281.1	chr16	-	172	1	Intergenic	novelGene_11134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAGATACAA	NA	False	NA	NA	False	NA	NA	NA	18108361	18108189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18108200_18108400
ES.13282.1	chr16	-	211	1	Intergenic	novelGene_11135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTTCTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	18113208	18112997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18113000_18113200
ES.13283.1	chr16	-	396	1	Intergenic	novelGene_11136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	AAAAAG	-32	NA	18113730	18113334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18113300_18113700
ES.13283.2	chr16	-	210	2	Intergenic	novelGene_11137	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	AAAAAG	-32	NA	18113731	18113334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18113383_18113569
ES.13283.3	chr16	-	145	1	Intergenic	novelGene_11138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGATGTGG	NA	False	NA	NA	False	NA	NA	NA	18113730	18113585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18113600_18113700
ES.13284.1	chr16	-	171	1	Intergenic	novelGene_11139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAGTGACCC	NA	False	NA	NA	False	NA	NA	NA	18115167	18114996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18115000_18115200
ES.13285.1	chr16	+	158	1	Intergenic	novelGene_11140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	18115872	18116030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18115900_18116000
ES.13286.1	chr16	+	151	1	Intergenic	novelGene_11141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	18162858	18163009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18162900_18163000
ES.13287.10	chr16	-	5398	8	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	92.3358996671768	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161776	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18119417_18120549_18120655_18121546_18121720_18125833_18125905_18128732_18128848_18130502_18134599_18142220_18142315_18161758
ES.13287.13	chr16	-	1470	8	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.4975546077748	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18142316	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130508_18130623_18134509_18134599_18142220
ES.13287.15	chr16	-	1602	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	92.1222014500305	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161770	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18119417_18120549_18120655_18121546_18121720_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161661
ES.13287.16	chr16	-	4049	1	NIC	ENSMUSG00000013539.15	novel	1495	8	NA	NA	-731	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTGTTGGCTTTTTC	NA	False	NA	-7	True	AATAAA	-13	NA	18122740	18118691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18118700_18122700
ES.13287.17	chr16	-	364	1	Genic_Genomic	ENSMUSG00000013539.15	novel	NA	NA	NA	NA	-231	1998	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	18124216	18123852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_18123900_18124200
ES.13287.18	chr16	-	6562	1	NIC	ENSMUSG00000013539.15	novel	2519	3	NA	NA	-144	-8463	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAGACAGGGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	18157086	18150524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18150500_18157100
ES.13287.3	chr16	-	5182	8	NNC	ENSMUSG00000013539.15	novel	1495	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	85.0418864382699	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	-4	True	AATAAA	-16	NA	18142315	18118688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18131105_18131286_18134599_18142220
ES.13287.5	chr16	-	1680	9	NIC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	100.064900814421	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18165921	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18119417_18120549_18120655_18121546_18121720_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18165734
ES.13287.6	chr16	-	1748	11	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.049575881798	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161776	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18145446_18145608_18161506_18161602_18161758
ES.13287.9	chr16	-	1505	9	NNC	ENSMUSG00000013539.15	novel	1622	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.8925153372134	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161774	18118690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18119432_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ES.13288.1	chr16	+	4696	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	2	0	2	0	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18166047	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.10	chr16	+	3981	20	NNC	ENSMUSG00000118669.2	novel	4624	20	NA	NA	-37	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.824937893224	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTTTTGTAAGAAAA	NA	False	NA	30	True	ATTAAA	-32	NA	18166100	18225068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18173889_18173986_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.11	chr16	+	4360	18	NNC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.8232347737341	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18166105	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222122_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.12	chr16	+	6170	16	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	-27	103	intron_retention	FALSE	canonical	3	22	junction_2	95.0835889567116	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18166110	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.15	chr16	+	3515	16	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	-26	106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.4689019620677	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18166111	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.16	chr16	+	4921	19	NNC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	103.034109778159	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18166111	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224067
ES.13288.17	chr16	+	3775	18	NNC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	-26	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	110.543107187707	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18166111	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222403_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.18	chr16	+	4167	18	NNC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	1	44	intron_retention	FALSE	canonical	2	11	junction_12	103.48160660994	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACTATCAACAAAAATT	NA	False	NA	12	True	ATTAAA	-14	NA	18166138	18225050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222122_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.19	chr16	+	4355	18	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	16	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.8247994100285	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18166153	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.2	chr16	+	4847	17	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	87.7540730892304	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18166050	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.20	chr16	+	4174	19	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	185	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1281632196821	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18166322	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166788_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.21	chr16	+	4017	1	Antisense	novelGene_ENSMUSG00002075123.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18178656	18182673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_18178700_18182700
ES.13288.22	chr16	+	4530	18	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	-5288	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5508546207483	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18205159	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18205323_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.23	chr16	+	3962	18	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	-3866	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5508546207483	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAACAAAAATTGAAATTT	NA	False	NA	19	True	ATTAAA	-21	NA	18206581	18225057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18206942_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.24	chr16	+	4531	16	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	-3561	27	intron_retention	FALSE	canonical	0	0	junction_1	98.1233690593406	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGAAACCAAAATAA	NA	False	NA	-5	True	AAGAAA	-16	NA	18206886	18225033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18206942_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.25	chr16	+	3630	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-103	705	-70	110	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTGCCTTGGC	NA	False	NA	13	True	ATTAAA	-16	NA	18210377	18225116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.26	chr16	+	3892	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-50	103	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	70.0702493484218	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210397	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224067
ES.13288.28	chr16	+	6510	13	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-22	1	intron_retention	FALSE	canonical	3	234	junction_1	27.6208204480284	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18210425	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222939_18223209_18223296_18223851
ES.13288.29	chr16	+	5283	14	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-22	28	intron_retention	FALSE	canonical	3	19	junction_10	69.9402111527745	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210425	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.3	chr16	+	3982	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	5	711	5	109	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18166050	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.30	chr16	+	4976	15	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-19	28	intron_retention	FALSE	canonical	3	221	junction_6	31.9033137553363	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210428	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18218524_18218834_18219004_18220316_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.31	chr16	+	5789	14	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-19	109	intron_retention	FALSE	canonical	3	19	junction_10	69.8868908651179	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18210428	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.32	chr16	+	3457	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-18	109	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	67.3057369190935	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18210429	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.34	chr16	+	4118	16	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	87.5625490720776	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210432	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222122_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.36	chr16	+	4280	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-43	-5	-10	0	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210437	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.37	chr16	+	5236	13	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-9	45	intron_retention	FALSE	canonical	3	221	junction_7	33.7378578981469	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTATCAACAAAAATTG	NA	False	NA	13	True	ATTAAA	-15	NA	18210438	18225051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18221486_18221649_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.38	chr16	+	5214	15	ISM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	-41	0	-8	0	intron_retention	FALSE	canonical	3	221	junction_7	29.0281355422842	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTTGTGACTCATTC	NA	False	NA	18	True	NA	NA	NA	18210439	18225821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.39	chr16	+	3478	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-8	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.0518633999312	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACTATCAACAAAAATT	NA	False	NA	12	True	ATTAAA	-14	NA	18210439	18225050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216557_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.4	chr16	+	3735	18	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	15	103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.8247994100285	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18166060	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.40	chr16	+	3517	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-6	104	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_11	66.1984469228697	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	NA	False	NA	7	True	ATTAAA	-10	NA	18210441	18225110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.41	chr16	+	4213	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	88.7057768341499	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210442	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.42	chr16	+	3877	16	FSM	ENSMUSG00000118669.2	ENSMUST00000239538.1	3829	16	-4	-44	2	44	multi-exon	FALSE	canonical	3	221	junction_7	31.2985622672991	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACTATCAACAAAAATT	NA	False	NA	12	True	ATTAAA	-14	NA	18210449	18225050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.43	chr16	+	5581	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	222	junction_12	29.5270873756436	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210449	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.44	chr16	+	4782	14	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	1	106	intron_retention	FALSE	canonical	1	3	junction_4	74.6370309600573	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18210454	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.45	chr16	+	6718	13	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	1	52	intron_retention	FALSE	canonical	3	222	junction_11	28.6642440836818	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAAAAATTGAAATTTT	NA	False	NA	20	True	ATTAAA	-22	NA	18210454	18225058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.46	chr16	+	3743	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.7596852858051	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210454	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216593_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224067
ES.13288.47	chr16	+	4184	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	4	109	intron_retention	FALSE	canonical	3	221	junction_6	31.2563593529381	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18210457	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.48	chr16	+	3452	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	5	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.7519599993527	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210458	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217062_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.49	chr16	+	3635	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	6	103	intron_retention	FALSE	canonical	3	221	junction_7	30.0106647710443	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210459	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.5	chr16	+	3846	18	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	18	106	combination_of_known_junctions	FALSE	canonical	3	13	junction_17	101.497166169723	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18166063	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.50	chr16	+	3646	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	6	105	intron_retention	FALSE	canonical	3	221	junction_7	31.3336170199924	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCCTGTCTTCTGCC	NA	False	NA	8	True	ATTAAA	-11	NA	18210459	18225111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.51	chr16	+	4056	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	6	62	intron_retention	FALSE	canonical	3	221	junction_7	28.5158825140579	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTTTTGTAAGAAAA	NA	False	NA	30	True	ATTAAA	-32	NA	18210459	18225068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223972_18224356
ES.13288.52	chr16	+	4233	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	70.0962507913226	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTTGTGACTCATT	NA	False	NA	17	True	NA	NA	NA	18210459	18225820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.53	chr16	+	4874	14	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	10	109	intron_retention	FALSE	canonical	3	221	junction_5	31.7316783086559	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18210463	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.54	chr16	+	1566	4	FSM	ENSMUSG00000118669.2	ENSMUST00000239537.1	1604	4	21	17	-12	-17	multi-exon	FALSE	canonical	3	234	junction_1	37.8505834389203	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGGTTATGCCTCTTC	NA	False	NA	NA	False	GATAAA	-3	NA	18210468	18217344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576
ES.13288.55	chr16	+	4868	13	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-12	103	intron_retention	FALSE	canonical	3	221	junction_6	32.2085219916855	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210468	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222939_18223209_18223296_18223851
ES.13288.56	chr16	+	4436	15	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-12	109	intron_retention	FALSE	canonical	3	19	junction_11	67.5459405266716	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTCTTCTGCCTTGG	NA	False	NA	12	True	ATTAAA	-15	NA	18210468	18225115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.57	chr16	+	4473	15	ISM	ENSMUSG00000118669.2	ENSMUST00000239538.1	3829	16	15	-103	-12	103	intron_retention	FALSE	canonical	3	221	junction_7	29.0281355422842	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210468	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.6	chr16	+	4524	18	NIC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	33	44	intron_retention	FALSE	canonical	3	22	junction_2	92.9352194665781	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACTATCAACAAAAATT	NA	False	NA	12	True	ATTAAA	-14	NA	18166078	18225050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.61	chr16	+	4123	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	67.3057369190935	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210474	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
ES.13288.62	chr16	+	4306	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	91.2715513933559	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18210475	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222591_18222748_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.63	chr16	+	4525	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	70.0702493484218	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTTGTGACTCATTC	NA	False	NA	18	True	NA	NA	NA	18210476	18225821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224067
ES.13288.64	chr16	+	5731	14	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	3	junction_4	77.121283104551	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAAAGTTTGTGACTCA	NA	False	NA	15	True	NA	NA	NA	18210477	18225818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.65	chr16	+	3954	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	28	intron_retention	FALSE	canonical	3	221	junction_6	31.4215778654662	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210481	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.66	chr16	+	4721	15	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	106	intron_retention	FALSE	non_canonical	0	0	junction_3	74.8936661173012	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18210481	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215365_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.67	chr16	+	3476	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	107	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	67.8652156852095	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGTCTTCTGCCTT	NA	False	NA	10	True	ATTAAA	-13	NA	18210481	18225113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222122_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.68	chr16	+	4339	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	221	junction_7	31.3336170199924	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18210481	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.69	chr16	+	3460	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	1	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.258423649766	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTTTTGTAAGAAAA	NA	False	NA	30	True	ATTAAA	-32	NA	18210481	18225068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222093_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.7	chr16	+	4518	19	NNC	ENSMUSG00000118669.2	novel	4698	19	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.33457617915	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTTGTGACTCATT	NA	False	NA	17	True	NA	NA	NA	18166084	18225820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18173889_18173986_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.70	chr16	+	3654	18	NNC	ENSMUSG00000118669.2	novel	3888	18	NA	NA	1	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.9423883271568	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18210481	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18212377_18212510_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.71	chr16	+	4386	15	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	1	106	intron_retention	FALSE	canonical	1	1	junction_6	72.4050750842728	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18210481	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218447_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.73	chr16	+	5903	13	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	2	52	intron_retention	FALSE	canonical	3	222	junction_10	32.0948031445729	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAAAAATTGAAATTTT	NA	False	NA	20	True	ATTAAA	-22	NA	18210482	18225058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.74	chr16	+	3162	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	2	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.7199306684473	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTTTTGTAAGAAAA	NA	False	NA	30	True	ATTAAA	-32	NA	18210482	18225068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215377_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.75	chr16	+	4327	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	3	28	intron_retention	FALSE	canonical	3	221	junction_6	31.5295980874409	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210483	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.77	chr16	+	4822	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	11	103	intron_retention	FALSE	canonical	3	222	junction_12	29.5270873756436	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210491	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.78	chr16	+	5841	14	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	12	103	intron_retention	FALSE	canonical	3	222	junction_11	31.0174602480069	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210492	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217896_18218405_18218524_18218834_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.79	chr16	+	4596	16	FSM	ENSMUSG00000118669.2	ENSMUST00000239538.1	3829	16	49	-816	-16	1	multi-exon	FALSE	canonical	3	221	junction_7	31.2985622672991	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18210502	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.8	chr16	+	4322	18	ISM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	44	717	44	103	intron_retention	FALSE	canonical	3	22	junction_2	92.1380790202201	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18166089	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ES.13288.80	chr16	+	3439	17	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	-16	106	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	88.7057768341499	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTGTCTTCTGCCT	NA	False	NA	9	True	ATTAAA	-12	NA	18210502	18225112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222420_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.81	chr16	+	4467	14	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-13	28	intron_retention	FALSE	non_canonical	0	0	junction_1	74.7191190095422	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	NA	False	NA	-4	True	AAGAAA	-17	NA	18210505	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210578_18214820_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.82	chr16	+	3572	17	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	128	103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.6664424868693	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210646	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18210796_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.83	chr16	+	3874	17	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	259	103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	90.9909851303963	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210777	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18211235_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221363_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.84	chr16	+	1444	1	Intergenic	novelGene_11143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATTCCAGAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	18210957	18212401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18211000_18212400
ES.13288.85	chr16	+	3657	17	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	463	103	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	90.4778978535642	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGCCTGTCTTCTG	NA	False	NA	6	True	ATTAAA	-9	NA	18210981	18225109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18211235_18214823_18214983_18215161_18215692_18216576_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.86	chr16	+	3497	17	NNC	ENSMUSG00000118669.2	novel	746	6	NA	NA	484	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.6664424868693	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAATTGAAATTTTTG	NA	False	NA	22	True	ATTAAA	-24	NA	18211002	18225060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18211126_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.87	chr16	+	3213	16	NNC	ENSMUSG00000118669.2	novel	3888	18	NA	NA	-2564	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.6096549981981	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGTCTTCTGCCTT	1286	False	NA	10	True	ATTAAA	-13	NA	18215273	18225113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18219491_18219549_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.88	chr16	+	3123	14	NNC	ENSMUSG00000118669.2	novel	4547	18	NA	NA	-939	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	74.7657485735501	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	2911	False	NA	23	True	NA	NA	NA	18216898	18225826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223215_18223296_18223851_18223972_18224356
ES.13288.9	chr16	+	4735	20	NNC	ENSMUSG00000118669.2	novel	4624	20	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.824937893224	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	NA	False	NA	19	True	NA	NA	NA	18166100	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18166321_18170649_18170702_18173889_18173986_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ES.13288.90	chr16	+	3207	12	NNC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-868	47	intron_retention	FALSE	canonical	1	3	junction_1	76.7807870251298	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTATCAACAAAAATTGAA	2982	False	NA	15	True	ATTAAA	-17	NA	18216969	18225053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18217058_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.91	chr16	+	4281	6	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-822	107	intron_retention	FALSE	canonical	3	241	junction_1	19.6834956245074	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGTCTTCTGCCTT	1163	False	NA	10	True	ATTAAA	-13	NA	18219059	18225113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18220389_18221357_18221486_18221649_18221801_18222075_18222490_18222583_18222939_18223209
ES.13288.92	chr16	+	3766	4	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	53	28	intron_retention	FALSE	canonical	3	241	junction_1	24.1798814444295	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	2038	False	NA	-4	True	AAGAAA	-17	NA	18219934	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18220389_18221357_18222490_18222583_18222939_18223209
ES.13288.93	chr16	+	3871	5	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	345	-2	intron_retention	FALSE	canonical	3	241	junction_1	27.5624291382309	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAAGTTTGTGACTCAT	2330	False	NA	16	True	NA	NA	NA	18220226	18225819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18220389_18221357_18222275_18222377_18222490_18222583_18223296_18223851
ES.13288.94	chr16	+	2881	5	NIC	ENSMUSG00000118669.2	novel	3829	16	NA	NA	-787	28	intron_retention	FALSE	canonical	3	222	junction_3	28.235615806991	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACCAAAATAAG	3515	False	NA	-4	True	AAGAAA	-17	NA	18221411	18225034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18221486_18221649_18222490_18222583_18222672_18222884_18222939_18223209
ES.13288.95	chr16	+	2381	5	NNC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	72	1	intron_retention	FALSE	canonical	0	0	junction_3	125.654287630785	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGACTCATTCT	4421	False	NA	19	True	NA	NA	NA	18222317	18225822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18222490_18222583_18222672_18222884_18222949_18223209_18223296_18223851
ES.13288.96	chr16	+	2409	3	ISM	ENSMUSG00000118669.2	ENSMUST00000239551.1	746	6	149	-377	149	104	intron_retention	FALSE	canonical	3	222	junction_2	39	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTGTCTTCTGC	4498	False	NA	7	True	ATTAAA	-10	NA	18222394	18225110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18222490_18222583_18222672_18222884
ES.13289.1	chr16	+	1905	17	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2846975913857	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245163	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18273215_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.10	chr16	+	1492	13	NIC	ENSMUSG00000075704.18	novel	1905	18	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.2646626156926	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGTCTGCGTGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	18245183	18297816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18245310_18248560_18248627_18259542_18259622_18260497_18260561_18261953_18262025_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.11	chr16	+	1873	17	NIC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	33.2846975913857	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245185	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.12	chr16	+	4531	10	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	-1	3293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.1675084091069	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGGCTGGTACCTC	NA	False	NA	NA	False	AATAAA	-17	NA	18245189	18278511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773
ES.13289.14	chr16	+	1796	16	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.6416458208206	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAAGCATGTCTGCGTG	NA	False	NA	NA	False	AATAAA	-11	NA	18245190	18297813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262050_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.15	chr16	+	173	1	Intergenic	novelGene_11146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGAAGCGAGCGGGGCC	9924	False	NA	NA	False	NA	NA	NA	18258925	18259098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18258900_18259100
ES.13289.16	chr16	+	835	7	NIC	ENSMUSG00000075704.18	novel	266	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8314977528279	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18290571	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18290631_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.17	chr16	+	1458	6	NNC	ENSMUSG00000075704.18	novel	1866	17	NA	NA	352	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	39.2509872487304	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18290952	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18291000_18291543_18291637_18293431_18293934_18293970_18294370_18296400_18296608_18297607
ES.13289.2	chr16	+	1248	10	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.1675084091069	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTTGTTGGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	18245173	18275212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773
ES.13289.3	chr16	+	1708	10	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	7	454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.1675084091069	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGCTTGTAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	18245173	18275672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773
ES.13289.4	chr16	+	1177	11	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	10	3614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.7524383650677	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTGCTGTGCAGGGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	18245176	18278832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18278636
ES.13289.5	chr16	+	1725	15	NNC	ENSMUSG00000075704.18	novel	1785	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.7226882680806	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245180	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18294271_18294370_18296400_18296608_18297607
ES.13289.6	chr16	+	1894	17	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2846975913857	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCGTGTGCTGTCCC	NA	False	NA	NA	False	AATAAA	-20	NA	18245181	18297822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.7	chr16	+	2074	18	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	45.4749636430762	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATGTCTGCGTGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	18245181	18297816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18273225_18273331_18274219_18274418_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.13289.8	chr16	+	559	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	-29	2	-5	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTCCCTGACTGTCT	NA	False	NA	10	True	NA	NA	NA	18245182	18256560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
ES.13289.9	chr16	+	1905	17	NNC	ENSMUSG00000075704.18	novel	1878	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.4185420728065	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245183	18297817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18245310_18248560_18248627_18255292_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ES.1329.1	chr1	+	4234	11	Antisense	novelGene_ENSMUSG00000026442.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAACAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132532877	132552214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132532977_132533221_132533323_132534739_132534794_132536124_132536245_132537490_132537645_132538050_132538214_132538510_132538625_132539267_132539412_132547126_132547259_132548661_132548851_132549250
ES.13290.1	chr16	+	181	1	Intergenic	novelGene_11148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	18313083	18313264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18313100_18313300
ES.13291.1	chr16	+	1278	1	Intergenic	novelGene_11149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18315231	18316509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18315200_18316500
ES.13292.1	chr16	+	1494	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	18	-27	18	25	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTCCCTGTGTTCTG	NA	False	NA	42	True	AATAAA	-44	NA	18317480	18383317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.10	chr16	+	5596	7	NIC	ENSMUSG00000000884.18	novel	1519	9	NA	NA	3	2	intron_retention	FALSE	canonical	3	212	junction_1	41.8545762797278	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAAGGTGGGAACTTCC	NA	False	NA	19	True	AATAAA	-21	NA	18317630	18383294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18371333_18382784
ES.13292.11	chr16	+	1252	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	113.411370192273	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317632	18383290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18366842_18366942_18371116_18371333_18382784
ES.13292.12	chr16	+	1265	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317641	18383290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.13	chr16	+	1551	9	NNC	ENSMUSG00000000884.18	novel	1519	9	NA	NA	2	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.077108822918	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGATCTCCCTGTGTTCT	NA	False	NA	41	True	AATAAA	-43	NA	18317642	18383316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317708_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366419_18366534_18366842_18366942_18371116_18371333_18382784
ES.13292.14	chr16	+	3380	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTAGACTTGATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	18317665	18385429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.15	chr16	+	3505	8	NIC	ENSMUSG00000000884.18	novel	3592	9	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	96.1913484166018	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGATTTGTCCAGGG	NA	False	NA	NA	False	NA	NA	NA	18317681	18385433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.16	chr16	+	2408	4	NNC	ENSMUSG00000086965.2	novel	865	3	NA	NA	32	1737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.5731249997729	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATACTTTGGATTTCA	NA	False	NA	121	True	TTTAAA	-24	NA	18317682	18322145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317702_18317795_18317891_18319689_18321412_18321573
ES.13292.17	chr16	+	2974	4	NNC	ENSMUSG00000086965.2	novel	865	3	NA	NA	35	2307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.5731249997729	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGTGTATGGTGG	NA	False	NA	2	True	AATAAA	-14	NA	18317685	18322715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317702_18317795_18317891_18319689_18321440_18321602
ES.13292.18	chr16	+	2499	3	NNC	ENSMUSG00000086965.2	novel	865	3	NA	NA	40	1742	intron_retention	TRUE	non_canonical	0	0	junction_2	10	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTGGATTTCATTTTT	NA	False	NA	126	True	TTTAAA	-29	NA	18317690	18322150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317891_18319689_18321458_18321619
ES.13292.19	chr16	+	1477	1	Intergenic	novelGene_11151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTTTCTGGAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	18323108	18324585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18323100_18324600
ES.13292.2	chr16	+	1498	9	NNC	ENSMUSG00000000884.18	novel	1485	8	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	139.795330304699	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGAAGCCTCAAGGTG	NA	False	NA	10	True	AATAAA	-12	NA	18317558	18383285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366419_18366534_18366842_18366942_18371116_18371333_18382784
ES.13292.20	chr16	+	224	1	Intergenic	novelGene_11152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATTGCATAGTATGT	NA	False	NA	NA	False	AAGAAA	-9	NA	18329875	18330099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18329900_18330100
ES.13292.21	chr16	+	1423	1	Intergenic	novelGene_11153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTATATTGCAGCAGA	NA	False	NA	NA	False	NA	NA	NA	18347811	18349234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18347800_18349200
ES.13292.22	chr16	+	183	1	Intergenic	novelGene_11154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCATTTTTTATTAG	2594	False	NA	NA	False	NA	NA	NA	18350940	18351123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18350900_18351100
ES.13292.23	chr16	+	175	2	Antisense	novelGene_ENSMUSG00000116825.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAATTTTTTTTCTT	2598	False	NA	NA	False	NA	NA	NA	18350944	18537881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_18351090_18537851
ES.13292.24	chr16	+	6931	3	NNC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	-4623	0	intron_retention	FALSE	canonical	0	0	junction_2	142	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTAGACTTGATTTGTCC	2101	False	NA	NA	False	NA	NA	NA	18362869	18385429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18366942_18371116_18371337_18382790
ES.13292.25	chr16	+	3849	3	NNC	ENSMUSG00000000884.18	novel	1519	9	NA	NA	-3682	0	intron_retention	FALSE	non_canonical	0	0	junction_2	142	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGCCTCAAGGTGGGA	3042	False	NA	13	True	AATAAA	-15	NA	18363810	18383288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18366942_18371116_18371333_18382786
ES.13292.26	chr16	+	882	4	ISM	ENSMUSG00000000884.18	ENSMUST00000167778.9	3592	9	46263	2091	-3594	-2	3prime_fragment	FALSE	canonical	1	3	junction_1	147.743772194371	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAAGCCTCAAGGTGG	3130	False	NA	11	True	AATAAA	-13	NA	18363898	18383286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18363964_18366842_18366942_18371116_18371333_18382784
ES.13292.27	chr16	+	2441	3	ISM	ENSMUSG00000000884.18	ENSMUST00000000904.15	1412	8	47685	6	-2274	-2	3prime_fragment	FALSE	canonical	3	284	junction_1	28.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAAGCCTCAAGGTGG	4450	False	NA	11	True	AATAAA	-13	NA	18365218	18383286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18366942_18371116_18371333_18382784
ES.13292.28	chr16	+	177	1	Intergenic	novelGene_11159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTTTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	18537706	18537883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18537700_18537900
ES.13292.3	chr16	+	1275	8	NNC	ENSMUSG00000000884.18	novel	1412	8	NA	NA	-14	3556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	130.487469098901	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTCTTTTCATTGT	NA	False	NA	NA	False	AGTAAA	-12	NA	18317558	18388985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18388589
ES.13292.4	chr16	+	3528	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	96	-2139	-14	0	multi-exon	FALSE	canonical	3	66	junction_1	85.0267664938998	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTAGACTTGATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	18317558	18385429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.5	chr16	+	1523	9	NNC	ENSMUSG00000000884.18	novel	1485	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.915656522881	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317564	18383292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317602_18317795_18317891_18345233_18345372_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.6	chr16	+	1110	6	NIC	ENSMUSG00000000884.18	novel	1485	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	130.373923773123	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317572	18383292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18317602_18317795_18317891_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.7	chr16	+	1558	9	NNC	ENSMUSG00000000884.18	novel	1519	9	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.178383152583	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGAAGCCTCAAGGTG	NA	False	NA	10	True	AATAAA	-12	NA	18317622	18383285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18317702_18317795_18317891_18345233_18345372_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13292.8	chr16	+	1448	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-15	2116	-5	21	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAAGATCTCCCTGTGT	NA	False	NA	38	True	AATAAA	-40	NA	18317622	18383313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ES.13293.1	chr16	-	176	1	Intergenic	novelGene_11142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGCCACAGACA	NA	False	NA	NA	False	NA	NA	NA	18173087	18172911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18172900_18173100
ES.13294.1	chr16	-	1830	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	-7	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.8299388298005	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACTGAGTTATTCTT	3881	False	NA	NA	False	ATTAAA	-23	NA	18245361	18225630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226044_18226280_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ES.13294.12	chr16	-	1709	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	119	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.8299388298005	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCACTGAGTTATT	-4	True	NA	NA	False	ATTAAA	-20	NA	18245235	18225633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226050_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ES.13294.13	chr16	-	1529	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	106	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	82.5818381970273	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCACTGAGTTATT	3994	False	NA	NA	False	ATTAAA	-20	NA	18245248	18225633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226051_18226278_18226791_18229432_18229565_18230439_18230708_18243053_18243111_18245105
ES.13294.16	chr16	-	1700	8	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	223	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.573300475695	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTCACTGAGTTA	4111	False	NA	NA	False	ATTAAA	-18	NA	18245131	18225635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226058_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18240773_18240879_18243053_18243111_18245105
ES.13294.2	chr16	-	1943	7	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	-122	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.8299388298005	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCACTGAGTTATTC	3766	False	NA	NA	False	ATTAAA	-21	NA	18245476	18225632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226058_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ES.13294.23	chr16	-	1092	4	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	1535	659	1535	-1	3prime_fragment	FALSE	canonical	3	209	junction_3	17.4610678049451	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGGGG	4420	False	NA	NA	False	AAAAAG	-8	NA	18230709	18226294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439
ES.13294.24	chr16	-	4476	1	Antisense	novelGene_ENSMUSG00000087556.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAAGCTGAGACGATG	6369	False	NA	NA	False	NA	NA	NA	18242873	18238397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_18238400_18242900
ES.13294.3	chr16	-	3544	5	NNC	ENSMUSG00000000326.14	novel	1978	5	NA	NA	-486	3	intron_retention	FALSE	non_canonical	0	0	junction_1	97.4535145595068	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCACTGAGTTATTC	2399	False	NA	NA	False	ATTAAA	-21	NA	18232730	18225632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226064_18226294_18226791_18229432_18229565_18229876_18230071_18230439
ES.13294.4	chr16	-	1697	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	73	2	at_least_one_novel_splicesite	TRUE	non_canonical	1	14	junction_1	85.5181852005759	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCACTGAGTTATT	3961	False	NA	NA	False	ATTAAA	-20	NA	18245281	18225633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226049_18226278_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ES.13294.8	chr16	-	1683	6	NNC	ENSMUSG00000000326.14	novel	1397	6	NA	NA	79	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.2773504263389	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCACTGAGTTATT	3967	False	NA	NA	False	ATTAAA	-20	NA	18245275	18225633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18226057_18226294_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ES.13295.1	chr16	-	835	1	Intergenic	novelGene_11144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18251259	18250424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18250400_18251300
ES.13296.1	chr16	-	178	1	Intergenic	novelGene_11145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATCCATTTT	NA	False	NA	NA	False	NA	NA	NA	18258004	18257826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18257800_18258000
ES.13296.2	chr16	-	177	2	Antisense	novelGene_ENSMUSG00000116842.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATCCATTTT	7192	False	NA	NA	False	NA	NA	NA	18393642	18257826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_18257954_18393592
ES.13296.3	chr16	-	196	1	Intergenic	novelGene_11147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTTGTTTTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	18263948	18263752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18263800_18263900
ES.13296.4	chr16	-	6799	1	Intergenic	novelGene_11150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAATTTAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	18328280	18321481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18321500_18328300
ES.13296.5	chr16	-	3512	2	Antisense	novelGene_ENSMUSG00000000884.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAGAAAATTTAGTT	NA	False	NA	NA	False	NA	NA	NA	18332466	18321484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_18322200_18329669
ES.13296.6	chr16	-	4083	1	Antisense	novelGene_ENSMUSG00000000884.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAAGGAATGCATGTACA	NA	False	NA	NA	False	NA	NA	NA	18361009	18356926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_18356900_18361000
ES.13296.7	chr16	-	174	1	Intergenic	novelGene_11155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGGG	7193	False	NA	NA	False	NA	NA	NA	18393641	18393467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18393500_18393600
ES.13297.1	chr16	-	1827	7	FSM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	-50	734	-50	-9	multi-exon	FALSE	canonical	1	1	junction_4	1.7950549357115	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCGGTGTGGCTATT	7690	False	NA	NA	False	CATAAA	-19	NA	18405769	18400462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285
ES.13298.1	chr16	-	2594	11	FSM	ENSMUSG00000072214.8	ENSMUST00000232653.2	3678	11	-225	1309	-225	0	multi-exon	FALSE	canonical	0	0	junction_5	1.02469507659596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGAGTGTCCGAGTGTT	NA	False	NA	-2	True	NA	NA	NA	18445446	18440560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18444837
ES.13298.2	chr16	-	2124	11	NNC	ENSMUSG00000072214.8	novel	2143	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1.02469507659596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGAGTGTCCGAGTGTT	NA	False	NA	-2	True	NA	NA	NA	18448684	18440560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18448545
ES.13299.1	chr16	-	174	1	Intergenic	novelGene_11156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGCCCACTACACAA	NA	False	NA	NA	False	NA	NA	NA	18484993	18484819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18484800_18485000
ES.133.1	chr1	+	187	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTATCATGAGT	NA	False	NA	NA	False	AATAAA	-7	NA	14734891	14735078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_14734900_14735100
ES.1330.1	chr1	-	6659	5	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	2868	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.24037034920393	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCCATGATTTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	132530029	132492427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132529708
ES.1330.10	chr1	-	3556	23	NNC	ENSMUSG00000026442.15	novel	750	3	NA	NA	4	5124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.49834692526094	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAGTCTATGCAACAGT	NA	False	NA	NA	False	TATAAA	-30	NA	132669512	132522448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132522953_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.11	chr1	-	3500	21	NIC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	2	344	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTATAGTTGTTGCTA	NA	False	NA	NA	False	TATAAA	-35	NA	132669533	132527228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.12	chr1	-	3195	21	NIC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	-29	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTCATTGTGCCAGC	NA	False	NA	NA	False	AAGAAA	-14	NA	132669564	132527564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.13	chr1	-	3240	23	NNC	ENSMUSG00000026442.15	novel	4927	32	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	8.51408652889361	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAGCCAATTTTGTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	132669526	132527574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132565601_132565620_132570415_132570597_132593216_132593326_132647231_132647307_132669408
ES.1330.14	chr1	-	3152	21	NNC	ENSMUSG00000026442.15	novel	3903	28	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.86622805932715	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAGCCAATTTTGTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	132669520	132527574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132555609_132555661_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669403
ES.1330.15	chr1	-	3076	20	FSM	ENSMUSG00000026442.15	ENSMUST00000188307.2	3049	20	-29	2	-29	-2	multi-exon	FALSE	canonical	0	0	junction_19	6.48544075821026	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAGCCAATTTTGTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	132669564	132527574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132669408
ES.1330.16	chr1	-	3187	22	NIC	ENSMUSG00000026442.15	novel	3903	28	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	7.76117437404927	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCATTAGCCAATTTTG	NA	False	NA	NA	False	AAGAAA	-1	NA	132669518	132527577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132555609_132555661_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.18	chr1	-	3277	12	NNC	ENSMUSG00000026442.15	novel	3049	20	NA	NA	-8301	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.60165271286068	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGTATCATTAGCC	1746	False	NA	NA	False	NA	NA	NA	132541198	132527584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132539624
ES.1330.19	chr1	-	3762	19	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	-5	-943	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	5.69600249687835	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCACTGCAGTGTGGGT	NA	False	NA	NA	False	AGTAAA	-12	NA	132669521	132530314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.2	chr1	-	4697	25	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	7.54143646057493	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCTGTCCTTTCATTA	NA	False	NA	-1	True	NA	NA	NA	132669552	132496986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.21	chr1	-	2710	18	NIC	ENSMUSG00000026442.15	novel	3903	28	NA	NA	-4	-1949	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	7.24318078057349	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCATTCTGCTACT	NA	False	NA	NA	False	NA	NA	NA	132669520	132531320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132531607_132532778_132532977_132533221_132533324_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.22	chr1	-	178	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAATAAA	7637	False	NA	NA	False	NA	NA	NA	132616844	132616666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132616700_132616800
ES.1330.3	chr1	-	1704	4	NIC	ENSMUSG00000026442.15	novel	3476	26	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTCCTTTCATT	8793	False	NA	-2	True	NA	NA	NA	132514900	132496987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132514800
ES.1330.4	chr1	-	2148	6	NIC	ENSMUSG00000026442.15	novel	3476	26	NA	NA	7148	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	3.5213633723318	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTCCTTTCATT	3274	False	NA	-2	True	NA	NA	NA	132525749	132496987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132525502
ES.1330.5	chr1	-	4300	26	NNC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.22736895975864	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTCCTTTCATT	NA	False	NA	-2	True	NA	NA	NA	132669520	132496987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132497757_132498125_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669403
ES.1330.6	chr1	-	8193	26	NNC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_24	7.75587519239447	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTCCTTTCATT	NA	False	NA	-2	True	NA	NA	NA	132669520	132496987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593263_132593299_132593326_132669408
ES.1330.8	chr1	-	4006	25	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	0	140	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	7.54143646057493	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAACACAACATGCAGAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	132669516	132497641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
ES.1330.9	chr1	-	1763	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCAGG	9330	False	NA	NA	False	TTTAAA	-7	NA	132519693	132517930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132517900_132519700
ES.13300.1	chr16	-	179	1	Intergenic	novelGene_11157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTTATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	18507285	18507106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18507100_18507300
ES.13301.1	chr16	-	212	1	Intergenic	novelGene_11158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTGAAATTTGATG	NA	False	NA	NA	False	NA	NA	NA	18518131	18517919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18517900_18518100
ES.13302.1	chr16	+	175	1	Intergenic	novelGene_11160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACTTGAACT	NA	False	NA	NA	False	NA	NA	NA	18545725	18545900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18545700_18545900
ES.13303.1	chr16	+	1460	1	FSM	ENSMUSG00000041378.3	ENSMUST00000043577.3	1416	1	-46	2	-46	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTCCTGTCCTCTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	18595550	18597010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18595600_18597000
ES.13304.1	chr16	+	5616	1	Antisense	novelGene_ENSMUSG00000000028.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAACGCAAGGGTCGTT	NA	False	NA	NA	False	AAAACA	-4	NA	18607049	18612665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_18607000_18612700
ES.13305.1	chr16	+	2174	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	-182	4	-182	1	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTTTGATATGGTATG	NA	False	NA	6	True	AATAAA	-16	NA	18630861	18654007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.10	chr16	+	2651	11	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	52	junction_2	128.371375313969	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631071	18654005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385_18646468_18652985
ES.13305.11	chr16	+	7866	13	NNC	ENSMUSG00000005262.14	novel	2078	13	NA	NA	5	-45	intron_retention	FALSE	non_canonical	0	0	junction_10	217.027440021354	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGTTACTGGCTCTGA	NA	False	NA	8	True	AATAAA	-19	NA	18631075	18653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385_18647867_18647911_18648530_18648666_18652765_18652985
ES.13305.12	chr16	+	9535	11	NNC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	190.668324584866	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTCTAGTTTGATATGG	NA	False	NA	2	True	AATAAA	-12	NA	18631076	18654003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18647867_18647911_18648530_18648666
ES.13305.13	chr16	+	2088	13	NIC	ENSMUSG00000005262.14	novel	2078	13	NA	NA	7	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	196.384172110574	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCGCCTCTAGTTTGA	NA	False	NA	-3	True	AATAAA	-7	NA	18631077	18653998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18634601_18634767_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.14	chr16	+	8491	6	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	7	-50	intron_retention	FALSE	canonical	0	0	junction_3	195.892827842165	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTTACAGTTACTGGC	NA	False	NA	3	True	AATAAA	-14	NA	18631077	18653104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633713_18634078_18634112_18643737_18643807_18644502_18644569_18645004
ES.13305.15	chr16	+	11357	8	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	7	-51	intron_retention	FALSE	canonical	3	425	junction_2	30.4322600044688	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTTACAGTTACTGG	NA	False	NA	2	True	AATAAA	-13	NA	18631077	18653103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633713_18634078_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004
ES.13305.16	chr16	+	4472	11	NIC	ENSMUSG00000005262.14	novel	2078	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	52	junction_2	128.673074106435	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGTTTGATATGGTAT	NA	False	NA	5	True	AATAAA	-15	NA	18631077	18654006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.17	chr16	+	1742	11	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	8	-51	intron_retention	FALSE	canonical	3	52	junction_2	128.371375313969	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTTACAGTTACTGG	NA	False	NA	2	True	AATAAA	-13	NA	18631078	18653103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385_18646468_18652985
ES.13305.18	chr16	+	4682	11	FSM	ENSMUSG00000005262.14	ENSMUST00000172013.9	934	11	29	-3777	9	-2763	multi-exon	FALSE	canonical	3	52	junction_2	128.968562060682	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	18631079	18650241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385
ES.13305.19	chr16	+	9400	6	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	5671	6	-5261	-1	intron_retention	FALSE	canonical	3	452	junction_2	13.7898513407506	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18636714	18654005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004
ES.13305.2	chr16	+	1197	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	-2	801	-2	56	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGAGGTTGTGTGC	NA	False	NA	109	True	TTTAAA	-43	NA	18631041	18653210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.20	chr16	+	2825	6	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	-2184	0	intron_retention	FALSE	canonical	3	430	junction_5	21.9872690436989	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGATATGGTATGTTGT	NA	False	NA	10	True	AATAAA	-20	NA	18639791	18654011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18646468_18652985
ES.13305.21	chr16	+	8770	6	NIC	ENSMUSG00000005262.14	novel	775	10	NA	NA	-2148	-3	intron_retention	FALSE	canonical	3	393	junction_5	34.8080450470865	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTCTAGTTTGATATGG	NA	False	NA	2	True	AATAAA	-12	NA	18639827	18654003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385
ES.13305.22	chr16	+	7128	4	NNC	ENSMUSG00000005262.14	novel	866	2	NA	NA	-539	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185.261976670875	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTTACTGGCTCTGAC	NA	False	NA	9	True	AATAAA	-20	NA	18645271	18653110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18645857_18646385_18647867_18647911_18648530_18648666
ES.13305.23	chr16	+	1281	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	-1	1	-1	-1	multi-exon	FALSE	canonical	3	86	junction_1	45.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTCTCAATTAGGGT	NA	False	NA	16	True	ATTAAA	-16	NA	18655326	18658909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18655370_18655455_18655624_18657839
ES.13305.24	chr16	+	809	1	NIC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTGGAAACTTAACT	NA	False	NA	NA	False	AGTAAA	-17	NA	18655328	18656137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18655300_18656100
ES.13305.25	chr16	+	1125	1	NIC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	318	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTAGGCTTCTATATA	NA	False	NA	NA	False	NA	NA	NA	18655330	18656455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18655300_18656500
ES.13305.26	chr16	+	1752	3	NNC	ENSMUSG00000071632.11	novel	361	3	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	2.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTCTCAATTAGGGT	NA	False	NA	16	True	ATTAAA	-16	NA	18655330	18658909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18655624_18657381_18658622_18658690
ES.13305.27	chr16	+	1065	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	3	213	0	-98	multi-exon	FALSE	canonical	3	86	junction_1	45.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGACAGACAGACA	NA	False	NA	NA	False	NA	NA	NA	18655330	18658697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18655370_18655455_18655624_18657839
ES.13305.28	chr16	+	1299	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	88.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTCTCAATTAGGG	NA	False	NA	15	True	ATTAAA	-15	NA	18655330	18658908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18655624_18657839_18658618_18658680
ES.13305.29	chr16	+	442	3	FSM	ENSMUSG00000071632.11	ENSMUST00000123146.8	361	3	0	-81	0	81	multi-exon	FALSE	canonical	3	7	junction_2	39.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCCAGGGTCATGG	NA	False	NA	NA	False	CATAAA	-33	NA	18655330	18656218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18655370_18655455_18655624_18655983
ES.13305.3	chr16	+	1084	12	NNC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	-2	-45	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	135.679678679644	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGTTACTGGCTCTGA	NA	False	NA	8	True	AATAAA	-19	NA	18631041	18653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645041_18645767_18645857_18646385_18646468_18652985
ES.13305.30	chr16	+	1849	3	FSM	ENSMUSG00000071632.11	ENSMUST00000123146.8	361	3	6	-1494	6	-919	multi-exon	FALSE	canonical	3	7	junction_2	39.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGATGACCGGTGTGT	NA	False	NA	NA	False	AATAAA	-8	NA	18655336	18657631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18655370_18655455_18655624_18655983
ES.13305.31	chr16	+	3483	2	ISM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	10	4	7	-4	intron_retention	FALSE	canonical	3	86	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATACCTGTCTCAATTAG	NA	False	NA	13	True	ATTAAA	-13	NA	18655337	18658906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18655370_18655455
ES.13305.32	chr16	+	1725	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	40.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCTGTCTCAATTAGG	NA	False	NA	14	True	ATTAAA	-14	NA	18655338	18658907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18655370_18655455_18655624_18657381
ES.13305.33	chr16	+	2298	3	NNC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	11	22394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	18655341	18681304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18655370_18655455_18655624_18679202
ES.13305.34	chr16	+	3552	1	NIC	ENSMUSG00000071632.11	novel	1281	3	NA	NA	25	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCTGTCTCAATTAGG	NA	False	NA	14	True	ATTAAA	-14	NA	18655355	18658907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18655400_18658900
ES.13305.35	chr16	+	251	1	Intergenic	novelGene_11162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATATATGCAGCTAGAG	NA	False	NA	NA	False	NA	NA	NA	18660897	18661148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18660900_18661100
ES.13305.4	chr16	+	1086	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	8	902	1	-45	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGTTACTGGCTCTGA	NA	False	NA	8	True	AATAAA	-19	NA	18631051	18653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.5	chr16	+	1950	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTTTGATATGGTATG	NA	False	NA	6	True	AATAAA	-16	NA	18631059	18654007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ES.13305.6	chr16	+	2686	11	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	10	-3	intron_retention	FALSE	canonical	3	393	junction_9	36.6960488336278	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTCTAGTTTGATATGG	NA	False	NA	2	True	AATAAA	-12	NA	18631060	18654003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385_18646468_18652985
ES.13305.7	chr16	+	6914	8	NIC	ENSMUSG00000005262.14	novel	934	11	NA	NA	10	1464	intron_retention	FALSE	canonical	3	52	junction_2	152.563670214726	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAGAGTTCTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	18631060	18648669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18631168_18633579_18633687_18634078_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004
ES.13305.8	chr16	+	8995	12	NNC	ENSMUSG00000005262.14	novel	934	11	NA	NA	-7	-1	intron_retention	TRUE	non_canonical	0	0	junction_10	203.601579821437	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTAGTTTGATATGGTA	NA	False	NA	4	True	AATAAA	-14	NA	18631063	18654005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645857_18646385_18647867_18647911_18648530_18648666
ES.13305.9	chr16	+	4658	13	Fusion	ENSMUSG00000005262.14_ENSMUSG00000071632.11	novel	1996	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	177	junction_12	85.1881496062295	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18631064	18658910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985_18655624_18657839
ES.13306.10	chr16	-	3143	17	NIC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	21	junction_14	123.962176060886	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630350	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ES.13306.12	chr16	-	4707	17	NIC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	368	junction_7	55.2466062306093	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630371	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18629232_18630054_18630115_18630264
ES.13306.13	chr16	-	4933	17	NIC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-15	0	intron_retention	FALSE	canonical	3	368	junction_5	52.3718674480871	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630391	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18599324_18600645_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.14	chr16	-	1416	5	NNC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	23837	0	intron_retention	FALSE	canonical	1	1	junction_3	218.285936331226	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18606504	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603776_18603942_18605518
ES.13306.16	chr16	-	1876	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	123.559652210262	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630353	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613625_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.17	chr16	-	4725	18	NIC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	3	0	intron_retention	FALSE	canonical	3	368	junction_6	54.4111605689832	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630373	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18599324_18600645_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.18	chr16	-	1885	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	121.699906671906	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630382	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614580_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.2	chr16	-	8109	13	NIC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-10	0	intron_retention	TRUE	canonical	3	368	junction_2	56.8181797979798	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCTGTGATCTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	18630351	18599196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18605819_18611927_18612090_18613511_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.20	chr16	-	1915	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	122.734230587985	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630400	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613983_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.21	chr16	-	3063	7	NNC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	19920	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	193.904615726393	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18610421	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18607965
ES.13306.22	chr16	-	1872	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.24050560681	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630373	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605593_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.23	chr16	-	1187	6	NNC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	23766	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	209.544649180073	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCTCTGGGTCTGTGA	NA	False	NA	-9	True	AATAAA	-14	NA	18606575	18599203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18606261_18606513
ES.13306.24	chr16	-	2186	20	FSM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	-50	7	-35	-1	multi-exon	FALSE	canonical	0	0	junction_19	120.274616521947	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCTCTGGGTCTGTGA	NA	False	NA	-9	True	AATAAA	-14	NA	18630772	18599203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ES.13306.25	chr16	-	1770	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	-24	1	-24	-1	multi-exon	FALSE	canonical	3	21	junction_15	122.52143375795	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCTCTGGGTCTGTGA	NA	False	NA	-9	True	AATAAA	-14	NA	18630400	18599203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ES.13306.26	chr16	-	1843	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	121.512637152085	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCCCCTCTGGGTCTGTG	NA	False	NA	-10	True	AATAAA	-13	NA	18630343	18599204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612083_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.27	chr16	-	241	1	Intergenic	novelGene_11161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGCATATTCTCTTA	NA	False	NA	NA	False	AATATA	-11	NA	18606504	18606263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18606300_18606500
ES.13306.4	chr16	-	3404	18	NIC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	3	3	intron_retention	FALSE	canonical	3	368	junction_7	54.6443676916041	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGGGTCTGTGATCTT	NA	False	NA	-5	True	AATAAA	-18	NA	18630373	18599199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18629232_18630054_18630115_18630264
ES.13306.5	chr16	-	2638	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-292	3	intron_retention	FALSE	canonical	1	2	junction_18	122.320263707941	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGGGTCTGTGATCTT	NA	False	NA	-5	True	AATAAA	-18	NA	18631029	18599199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630463_18630963
ES.13306.6	chr16	-	6017	17	NIC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	-2	0	intron_retention	FALSE	canonical	3	368	junction_5	55.546151981933	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630343	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.7	chr16	-	3350	18	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_3	122.443518509203	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630373	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603776_18603942_18605518_18605603_18605679_18605819_18611927_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.8	chr16	-	1841	19	NNC	ENSMUSG00000000028.16	novel	2143	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	120.854774598316	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630373	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603863_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
ES.13306.9	chr16	-	1816	17	NNC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_5	162.245846922964	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630361	18599202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605819_18611920_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ES.13307.1	chr16	-	215	1	Intergenic	novelGene_11163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	18665996	18665781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18665800_18666000
ES.13308.1	chr16	-	183	1	Intergenic	novelGene_11164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGATTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	18667273	18667090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18667100_18667300
ES.13309.1	chr16	-	202	1	Intergenic	novelGene_11165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGTCTTGTTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	18667519	18667317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18667300_18667500
ES.1331.1	chr1	-	188	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132752724	132752536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132752500_132752700
ES.13310.1	chr16	+	4622	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	-402	-2	-373	2	multi-exon	TRUE	canonical	3	33	junction_15	30.9156277902725	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTCCCTGCCTTTT	NA	False	NA	9	True	AATAAA	-25	NA	18695413	18789061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.10	chr16	+	4172	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	36.4243651283039	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695762	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18695965_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.11	chr16	+	4105	24	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	36.4356646152452	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695766	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.12	chr16	+	4282	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_15	33.301547344764	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695960	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.13	chr16	+	4182	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.3652244741016	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695982	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18715203_18715315_18715389_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.15	chr16	+	2295	14	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	39.0372299919421	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGCTGATTATCCAG	NA	False	NA	6	True	AATAAA	-15	NA	18695983	18746760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.16	chr16	+	4075	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	36.1651766206112	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695983	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.17	chr16	+	2360	13	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	28.1553231596127	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCTGATTATCCAGAT	NA	False	NA	8	True	AATAAA	-17	NA	18695985	18746762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.18	chr16	+	5138	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-34	-109	intron_retention	FALSE	canonical	1	1	junction_16	40.0457854281266	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAACTTGTCTATCTTC	NA	False	NA	NA	False	TTTAAA	-44	NA	18695985	18788917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18765893_18765993_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.19	chr16	+	4353	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	40.7533851354706	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695985	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18765893_18765993_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.2	chr16	+	2598	13	NIC	ENSMUSG00000022702.17	novel	2044	13	NA	NA	-343	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	41.3282086876909	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTGATTATCCAGATT	NA	False	NA	9	True	AATAAA	-18	NA	18695443	18746763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18695965_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.20	chr16	+	1886	8	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	171	52884	-33	839	5prime_fragment	FALSE	canonical	3	103	junction_2	15.154981669001	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGGGAGTCCA	NA	False	NA	NA	False	AATAAA	-14	NA	18695986	18736175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189
ES.13310.21	chr16	+	2151	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	171	42296	-33	2	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTGATTATCCAGATT	NA	False	NA	9	True	AATAAA	-18	NA	18695986	18746763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.22	chr16	+	4139	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.7929065680828	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695986	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714704_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.23	chr16	+	4102	12	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-33	820	intron_retention	FALSE	canonical	3	103	junction_2	12.6275312493989	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTGGTTCCTATATT	NA	False	NA	NA	False	AATAAA	-13	NA	18695986	18747581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18715203_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.24	chr16	+	5318	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-32	-5	intron_retention	FALSE	canonical	2	15	junction_3	36.9597895241121	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCATTTGCCTTCCCT	NA	False	NA	2	True	AATAAA	-18	NA	18695987	18789054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.25	chr16	+	4135	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.3105471484357	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18695997	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18715208_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18743086_18743194_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.26	chr16	+	4383	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-19	-3	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	37.8463419632598	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18696000	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.27	chr16	+	4350	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	40.0464530264542	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTCCCTGCCTTT	NA	False	NA	8	True	AATAAA	-24	NA	18696000	18789060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18743086_18743194_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.28	chr16	+	4875	11	NNC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	-14	-3	intron_retention	FALSE	canonical	0	0	junction_9	39.8458278869946	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTGATTATCC	NA	False	NA	4	True	AATAAA	-13	NA	18696005	18746758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744399_18744614_18746187
ES.13310.29	chr16	+	4159	27	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	41.5702157828978	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18696006	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18743086_18743194_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.3	chr16	+	129	1	Antisense	novelGene_ENSMUSG00000022706.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCACCAGCCTAGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	18695464	18695593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_18695500_18695600
ES.13310.31	chr16	+	4250	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	40.3095224481759	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCATTTGCCTTCCCT	NA	False	NA	2	True	AATAAA	-18	NA	18696014	18789054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744395_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.32	chr16	+	2095	14	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	199	36980	-5	-1751	5prime_fragment	FALSE	canonical	3	63	junction_13	20.7942868803887	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCATTCTCTTATTAG	NA	False	NA	NA	False	AAAAAG	-5	NA	18696014	18752079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617
ES.13310.33	chr16	+	4120	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.2227688976696	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18696014	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18717496_18717601_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.34	chr16	+	2362	14	NIC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	43.731699469167	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGATTCCTGTGTCTG	NA	False	NA	19	True	AATAAA	-28	NA	18696019	18746773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.35	chr16	+	4157	27	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.795247101016	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18696019	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714704_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18762010_18762065_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.36	chr16	+	2000	12	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	208	43984	4	668	5prime_fragment	FALSE	canonical	3	103	junction_2	13.0997444931237	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGTAGATTCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	18696023	18745075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397
ES.13310.37	chr16	+	2196	14	NNC	ENSMUSG00000022702.17	novel	1911	16	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.3889479287903	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCTGATTATCCAGAT	NA	False	NA	8	True	AATAAA	-17	NA	18696032	18746762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714704_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.38	chr16	+	3726	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	350	142	4	-109	multi-exon	FALSE	canonical	3	33	junction_15	30.9156277902725	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAACTTGTCTATCTTC	NA	False	NA	NA	False	TTTAAA	-44	NA	18696165	18788917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.39	chr16	+	3995	25	NNC	ENSMUSG00000022702.17	novel	647	6	NA	NA	200	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.152840884091	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18696361	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696596_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.4	chr16	+	2378	13	FSM	ENSMUSG00000022702.17	ENSMUST00000120532.9	2044	13	-321	-13	-321	13	multi-exon	FALSE	canonical	2	5	junction_1	35.0186458269813	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGATTCCTGTGTCTGA	NA	False	NA	20	True	AATAAA	-29	NA	18695465	18746774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_18695965_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
ES.13310.40	chr16	+	4218	26	NNC	ENSMUSG00000022702.17	novel	647	6	NA	NA	211	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.9140276093506	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18696372	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696596_18713523_18713587_18714652_18714678_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.41	chr16	+	3945	26	NNC	ENSMUSG00000022702.17	novel	647	6	NA	NA	296	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	38.7040049607273	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18696457	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696614_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.42	chr16	+	4221	26	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	17362	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	41.6031537266107	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18713523	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18713587_18714652_18714797_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18743086_18743194_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.43	chr16	+	3700	23	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	19386	3	19040	-3	3prime_fragment	FALSE	canonical	3	33	junction_13	30.9753300931591	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18715201	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.44	chr16	+	3501	21	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-12426	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	40.3650839216271	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTCCCTGC	NA	False	NA	4	True	AATAAA	-20	NA	18729396	18789056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18765893_18765993_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.45	chr16	+	3405	20	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	33581	0	-12426	0	3prime_fragment	FALSE	canonical	3	33	junction_10	31.4138667618418	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18729396	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.46	chr16	+	4408	1	NIC	ENSMUSG00000099908.2	novel	2982	24	NA	NA	85334	-29922	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGTAGATTCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	18740667	18745075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18740700_18745100
ES.13310.47	chr16	+	822	3	NNC	ENSMUSG00000022702.17	novel	686	4	NA	NA	-1165	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	69	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18743161	18746761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18743194_18744397_18744614_18746187
ES.13310.48	chr16	+	2590	13	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	110	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	32.1273507570523	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18744436	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.49	chr16	+	171	1	Intergenic	novelGene_11168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	18772357	18772528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18772400_18772500
ES.13310.5	chr16	+	4775	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-314	-106	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	37.8463419632598	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGTCTATCTTCATT	NA	False	NA	NA	False	NA	NA	NA	18695472	18788920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.50	chr16	+	2470	1	Genic_Genomic	ENSMUSG00000022702.17	novel	NA	NA	NA	NA	27990	1696	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAACATA	NA	False	NA	NA	False	NA	NA	NA	18788285	18790755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_18788300_18790800
ES.13310.6	chr16	+	4280	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-313	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	38.5353032945116	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695473	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18695965_18713523_18713587_18714652_18714678_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.7	chr16	+	4798	28	NNC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-302	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.2714113527628	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695484	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18696270_18713523_18713587_18714652_18714678_18715203_18715315_18715398_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18765893_18765993_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.8	chr16	+	4012	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	34.7319097596944	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695716	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18695965_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13310.9	chr16	+	4423	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	36.3301747862572	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695754	18789059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ES.13311.1	chr16	-	1208	5	NNC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	-70	1728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	768.173157562798	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAATGAGCACTGTG	NA	False	NA	NA	False	NA	NA	NA	18695682	18689039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18689100_18690969_18691413_18692286_18692446_18694073_18694158_18695220
ES.13311.10	chr16	-	1598	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	-517	199	-517	9	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTTTGTTTTGTTTT	NA	False	NA	-15	True	AATAAA	-16	NA	18696129	18690966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ES.13311.11	chr16	-	3261	2	FSM	ENSMUSG00000022706.17	ENSMUST00000232123.2	675	2	69	-2655	-1	9	multi-exon	FALSE	canonical	3	1642	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTTTGTTTTGTTTT	NA	False	NA	-15	True	AATAAA	-16	NA	18695290	18690966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18694158_18695220
ES.13311.12	chr16	-	1390	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	-605	-7	-282	7	multi-exon	FALSE	canonical	3	71	junction_3	827.835061403471	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTTTGTTTTGTT	NA	False	NA	-17	True	AATAAA	-14	NA	18695894	18690968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
ES.13311.13	chr16	-	1682	3	NIC	ENSMUSG00000022706.17	novel	778	4	NA	NA	-24	6	intron_retention	FALSE	canonical	3	71	junction_2	883.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCTGTCTTTTGTTTTGT	NA	False	NA	-18	True	AATAAA	-13	NA	18695313	18690969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18692446_18694073_18694187_18695220
ES.13311.17	chr16	-	1890	1	Genic_Genomic	ENSMUSG00000022706.17	novel	NA	NA	NA	NA	-1013	-1114	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAGAGCAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	18696625	18694735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_18694700_18696600
ES.13311.2	chr16	-	3517	3	NIC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	4	1690	intron_retention	FALSE	canonical	3	1642	junction_2	98	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18695285	18689077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18692446_18694073_18694158_18695220
ES.13311.3	chr16	-	1071	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	210	-1	-43	1	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGTTTATTTTAATCA	NA	False	NA	-6	True	AATAAA	-16	NA	18695402	18690766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ES.13311.5	chr16	-	1089	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	-109	-202	-39	-6	multi-exon	FALSE	canonical	3	71	junction_3	827.835061403471	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCTGTCGTTTATT	NA	False	NA	-13	True	AATAAA	-9	NA	18695398	18690773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
ES.13311.6	chr16	-	1816	3	NIC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	9	-6	intron_retention	FALSE	canonical	3	1642	junction_2	98	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCTGTCGTTTATT	NA	False	NA	-13	True	AATAAA	-9	NA	18695280	18690773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_18692446_18694073_18694158_18695220
ES.13311.9	chr16	-	1589	3	NNC	ENSMUSG00000022706.17	novel	675	2	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	821	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCTGTCGTTTATT	NA	False	NA	-13	True	AATAAA	-9	NA	18695290	18690773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_18690887_18692751_18694158_18695220
ES.13312.1	chr16	-	5353	1	Antisense	novelGene_ENSMUSG00000099908.2_AS_novelGene_ENSMUSG00000022702.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCACCAGGTTGGACTT	NA	False	NA	NA	False	NA	NA	NA	18717858	18712505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_18712500_18717900
ES.13312.2	chr16	-	526	1	Intergenic	novelGene_11166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	18717857	18717331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18717300_18717900
ES.13313.1	chr16	-	185	1	Intergenic	novelGene_11167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATGGGATGAGGT	NA	False	NA	NA	False	NA	NA	NA	18756779	18756594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18756600_18756800
ES.13314.1	chr16	-	159	1	Intergenic	novelGene_11169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	18847804	18847645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_18847600_18847800
ES.13315.1	chr16	+	859	2	Intergenic	novelGene_11170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGATAAGGAATCTGC	NA	False	NA	NA	False	NA	NA	NA	18854537	18859454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_18854906_18858963
ES.13315.2	chr16	+	525	3	NNC	ENSMUSG00000106567.2	novel	458	4	NA	NA	-15449	147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATCTTCCTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	18854667	18925646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18854906_18918001_18918098_18925455
ES.13315.3	chr16	+	3641	8	NNC	ENSMUSG00000106567.2	novel	458	4	NA	NA	-15306	223399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.12485826771597	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCCTGTTCTCCATCTG	NA	False	NA	NA	False	AATAAA	-29	NA	18854810	19148898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_18854906_18884310_18884404_18918001_18918098_18925455_18925565_19017481_19017575_19021786_19021880_19098351_19098501_19145985
ES.13315.4	chr16	+	4526	1	Genic_Genomic	ENSMUSG00000106567.2	novel	NA	NA	NA	NA	-3433	-54290	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCTCTGGACTGAAG	NA	False	NA	NA	False	AATAAA	-18	NA	18866683	18871209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_18866700_18871200
ES.13316.1	chr16	+	1454	1	Intergenic	novelGene_11171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTGTGTCCCATAAGT	NA	False	NA	NA	False	NA	NA	NA	19166885	19168339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_19166900_19168300
ES.13317.1	chr16	+	4482	5	NIC	ENSMUSG00000022686.15	novel	4872	6	NA	NA	1	22	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	44.4690903887183	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	29	True	AATAAA	-37	NA	19578984	19591235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19579228_19579390_19579578_19582900_19583104_19583857_19583965_19587493
ES.13317.10	chr16	+	4531	5	NNC	ENSMUSG00000022686.15	novel	4872	6	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8214868645526	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTTACTTGGGTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	19579117	19591507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19579220_19579390_19579578_19583857_19583965_19584250_19584372_19587493
ES.13317.11	chr16	+	1974	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	157	2127	-8	-288	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCAAGGAATTCATAT	NA	False	NA	NA	False	ATTAAA	-14	NA	19579140	19589086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ES.13317.12	chr16	+	4378	4	NIC	ENSMUSG00000022686.15	novel	4872	6	NA	NA	-84	22	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.7920758593715	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	29	True	AATAAA	-37	NA	19579251	19591235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19579578_19582900_19583104_19583857_19583965_19587493
ES.13317.13	chr16	+	4169	3	FSM	ENSMUSG00000022686.15	ENSMUST00000131557.8	444	3	-78	-3647	-78	22	multi-exon	FALSE	canonical	3	81	junction_1	14.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	29	True	AATAAA	-37	NA	19579257	19591235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579578_19583857_19583965_19587493
ES.13317.15	chr16	+	3848	3	FSM	ENSMUSG00000022686.15	ENSMUST00000131557.8	444	3	0	-3404	0	9	multi-exon	FALSE	canonical	3	81	junction_1	14.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTCCCAGATGGTCAC	NA	False	NA	NA	False	NA	NA	NA	19579335	19590992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579578_19583857_19583965_19587493
ES.13317.16	chr16	+	4179	4	ISM	ENSMUSG00000022686.15	ENSMUST00000121344.8	4175	5	381	-222	2	-8	3prime_fragment	FALSE	canonical	2	7	junction_2	34.1987654098149	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCATCAGTAATGT	NA	False	NA	-1	True	AATAAA	-7	NA	19579338	19591205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19579578_19583857_19583965_19584250_19584372_19587493
ES.13317.17	chr16	+	4089	3	FSM	ENSMUSG00000022686.15	ENSMUST00000119468.2	2229	3	1	-1861	1	22	multi-exon	FALSE	canonical	3	9	junction_1	50.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	29	True	AATAAA	-37	NA	19579804	19591235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19580045_19583857_19583965_19587493
ES.13317.18	chr16	+	4316	1	NIC	ENSMUSG00000022686.15	novel	4258	4	NA	NA	7086	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCATCAGTAATGT	NA	False	NA	-1	True	AATAAA	-7	NA	19586889	19591205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19586900_19591200
ES.13317.2	chr16	+	4218	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	62	-22	62	22	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGGCATCATTCT	NA	False	NA	29	True	AATAAA	-37	NA	19579045	19591235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ES.13317.3	chr16	+	4466	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	87	-295	-78	5	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTTACTTGGGTGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	19579070	19591508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ES.13317.4	chr16	+	4079	3	NIC	ENSMUSG00000022686.15	novel	4872	6	NA	NA	-75	18	combination_of_known_splicesites	TRUE	canonical	1	7	junction_2	33	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGGGCATCA	NA	False	NA	25	True	AATAAA	-33	NA	19579073	19591231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19579228_19579390_19579578_19587493
ES.13317.5	chr16	+	3737	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	116	405	-49	-175	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATGAAGCAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	19579099	19590808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ES.13317.6	chr16	+	4279	5	FSM	ENSMUSG00000022686.15	ENSMUST00000121344.8	4175	5	142	-246	-49	16	multi-exon	FALSE	canonical	2	7	junction_3	34.3829536253068	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCCTGTGTGGGCAT	NA	False	NA	23	True	AATAAA	-31	NA	19579099	19591229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19584250_19584372_19587493
ES.13317.7	chr16	+	4000	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	118	140	-47	90	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCATCTTTTTTCA	NA	False	NA	NA	False	AGTAAA	-30	NA	19579101	19591073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ES.13317.8	chr16	+	4466	6	FSM	ENSMUSG00000022686.15	ENSMUST00000164397.8	4872	6	118	288	-47	2	multi-exon	FALSE	canonical	2	6	junction_3	26.2343286554087	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAATGTGAATTTAAAA	NA	False	NA	9	True	AATAAA	-17	NA	19579101	19591215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19579228_19579390_19579578_19582900_19583104_19583857_19583965_19584250_19584372_19587493
ES.13317.9	chr16	+	4099	5	NNC	ENSMUSG00000022686.15	novel	4258	4	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.5154291597658	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAGTAATGTGAATTTA	NA	False	NA	6	True	AATAAA	-14	NA	19579103	19591212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493_19589660_19589697
ES.13318.1	chr16	-	4564	1	Antisense	novelGene_ENSMUSG00000022686.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAGAAAAGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	19587200	19582636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_19582600_19587200
ES.13318.2	chr16	-	3416	1	Antisense	novelGene_ENSMUSG00000022686.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACATGTATTTAGTCTT	NA	False	NA	NA	False	NA	NA	NA	19587200	19583784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_19583800_19587200
ES.13318.3	chr16	-	3128	2	Antisense	novelGene_ENSMUSG00000022686.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACATGTATTTAGTC	NA	False	NA	NA	False	NA	NA	NA	19587200	19583786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_19583963_19584248
ES.13319.1	chr16	+	247	1	Intergenic	novelGene_11172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGAGTGAAACTAAGT	NA	False	NA	NA	False	AATAGA	-13	NA	19914278	19914525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_19914300_19914500
ES.1332.1	chr1	+	3497	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	-71	2	-71	-2	multi-exon	FALSE	canonical	3	16	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTTGAGTGCTGGGT	NA	False	NA	20	True	AATAAA	-33	NA	132807939	132867741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132808414_132864718
ES.1332.2	chr1	+	3450	3	NNC	ENSMUSG00000026443.4	novel	3428	2	NA	NA	2	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATAAACG	NA	False	NA	-24	True	NA	NA	NA	132808094	132867697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132808414_132859150_132859303_132864718
ES.1332.3	chr1	+	3535	3	NNC	ENSMUSG00000026443.4	novel	3428	2	NA	NA	2	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTGGGGAGAAGATGA	NA	False	NA	3	True	AATAAA	-16	NA	132808094	132867724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132808414_132845473_132845684_132864718
ES.1332.4	chr1	+	3573	3	NNC	ENSMUSG00000026443.4	novel	3428	2	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTTGAGTGCTGGGT	NA	False	NA	20	True	AATAAA	-33	NA	132808095	132867741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132808414_132852746_132852979_132864718
ES.13320.1	chr16	+	3931	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-7	-3754	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTAGTATTTTTG	NA	False	NA	NA	False	AGTAAA	-1	NA	19916284	19944217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
ES.13320.10	chr16	+	3835	8	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	5	-3754	intron_retention	FALSE	canonical	0	0	junction_7	36.0905889706014	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTAGTATTTTTG	NA	False	NA	NA	False	AGTAAA	-1	NA	19916317	19944217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
ES.13320.100	chr16	+	2682	16	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	2	-6275	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	44.1326283931615	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCTTTTCCACTGTAT	NA	False	NA	NA	False	TATAAA	-14	NA	19959844	20016364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20015783
ES.13320.101	chr16	+	3408	10	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	2	7125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	54.6533407425474	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTGCTTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	19959844	19997069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19994793
ES.13320.102	chr16	+	2411	6	ISM	ENSMUSG00000041215.17	ENSMUST00000232172.2	5671	12	3	30305	3	1597	5prime_fragment	FALSE	canonical	3	113	junction_5	17.1510932596147	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTTTAAAAAAAATTCATG	NA	False	NA	NA	False	NA	NA	NA	19959845	19979601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886
ES.13320.103	chr16	+	4567	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	3	1929	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_30	37.6861896308036	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCAATCGTTTCCCTC	NA	False	NA	NA	False	AGTAAA	-15	NA	19959845	20053252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20052959
ES.13320.104	chr16	+	6241	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.2574508039397	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959847	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19986229_19986403_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.106	chr16	+	6006	30	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	15	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.0261444722683	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGGGTTTTCTGAGCT	NA	False	NA	7	True	AATAAA	-13	NA	19959857	20051314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978007_19980725_19980888_19989942_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012581_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046405_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.107	chr16	+	5935	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	16	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.5633962902847	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAACAGTTTCTGTGT	NA	False	NA	-95	True	GATAAA	-45	NA	19959858	20051212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012408_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.108	chr16	+	4341	30	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	18	-601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.0972231013087	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	19959860	20049471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049261
ES.13320.109	chr16	+	5758	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	55	299	29	-299	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	19959871	20051024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.11	chr16	+	8086	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	5	3	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTTTAAGTTTGGTT	NA	False	NA	12	True	ATTAAA	-20	NA	19916317	19947974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.110	chr16	+	2762	17	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	34	-6188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	54.7884782025382	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAGTTGAAATACAGC	NA	False	NA	NA	False	NA	NA	NA	19959876	20016451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20013385_20013411_20015783
ES.13320.111	chr16	+	8489	28	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	34	-9	intron_retention	FALSE	canonical	0	0	junction_5	38.6631543743244	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGGGTTTTCTGAGCT	NA	False	NA	7	True	AATAAA	-13	NA	19959876	20051314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247
ES.13320.112	chr16	+	6102	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.7016339615976	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959876	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19986229_19986403_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.113	chr16	+	7000	29	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	34	-4	intron_retention	FALSE	canonical	0	0	junction_5	47.7862347825593	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959876	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.115	chr16	+	6172	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	72	-247	42	247	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCAGACTCTTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	19959884	20051570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.116	chr16	+	6304	31	NIC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	207	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.7522759188269	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAGCTGGAAGCAC	NA	False	NA	15	True	AATAAA	-21	NA	19960049	20051322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19960412_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.117	chr16	+	6255	31	NNC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	-230	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.6288428020949	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19960083	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19960412_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975873_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.118	chr16	+	6037	30	NIC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	-132	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.4421274783163	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGGTTTTCTGAGCTG	NA	False	NA	8	True	AATAAA	-14	NA	19960181	20051315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19960412_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.119	chr16	+	5868	29	NIC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	-127	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.477851033398	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19960186	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19960412_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.12	chr16	+	8146	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	26	0	5	0	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	9	True	ATTAAA	-17	NA	19916317	19947971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.120	chr16	+	6082	30	NIC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	-119	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.0969344248691	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19960194	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19960412_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20049514
ES.13320.121	chr16	+	4643	31	NNC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	-118	1929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.3699858091129	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCAATCGTTTCCCTC	NA	False	NA	NA	False	AGTAAA	-15	NA	19960195	20053252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19960412_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20052959
ES.13320.122	chr16	+	2515	10	NNC	ENSMUSG00000041215.17	novel	4405	28	NA	NA	-86	7124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.3751654430237	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTTGTGCTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	19960227	19997068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19960412_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19995728
ES.13320.123	chr16	+	3193	1	Intergenic	novelGene_11174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19964817	19968010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_19964800_19968000
ES.13320.124	chr16	+	3852	26	NNC	ENSMUSG00000041215.17	novel	4405	28	NA	NA	1254	1894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.6021388491782	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTGCATTTTAGTAA	NA	False	NA	NA	False	NA	NA	NA	19972914	20053217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19972980_19975636_19975874_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20052959
ES.13320.125	chr16	+	5196	24	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	3023	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_23	40.7194282087604	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19980720	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20049514
ES.13320.126	chr16	+	5191	23	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	12247	256	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	40.2841405949174	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTTGTCTAACAAGCT	NA	False	NA	NA	False	AATAAA	-25	NA	19989944	20051579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.127	chr16	+	6446	21	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-8086	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	42.1915572123144	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTTTCTGAGCTGG	NA	False	NA	9	True	AATAAA	-15	NA	19996579	20051316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.128	chr16	+	4949	22	ISM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	38433	4	-6416	-4	3prime_fragment	FALSE	canonical	3	106	junction_1	24.0651986662914	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19998249	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.129	chr16	+	4634	21	NNC	ENSMUSG00000041215.17	novel	563	6	NA	NA	624	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.2225058470006	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	20005289	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20005391_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.13	chr16	+	2148	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	29	5995	-3	-5995	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAAATTCCAATATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	19916320	19941976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.130	chr16	+	215	1	Intergenic	novelGene_11176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATTTTTTTAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	20006609	20006824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20006600_20006800
ES.13320.131	chr16	+	4669	20	ISM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	48136	4	3287	-4	3prime_fragment	FALSE	canonical	3	138	junction_7	18.9983232967713	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	20007952	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.133	chr16	+	178	1	ISM	ENSMUSG00000041215.17	ENSMUST00000232172.2	5671	12	49886	0	-1987	0	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20009728	20009906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20009700_20009900
ES.13320.134	chr16	+	3874	16	NNC	ENSMUSG00000041215.17	novel	563	6	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.1118956613414	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	20013934	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20014007_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.135	chr16	+	3723	15	ISM	ENSMUSG00000041215.17	ENSMUST00000232019.2	4559	29	53171	-1248	-1281	-3	3prime_fragment	FALSE	canonical	3	138	junction_2	16.2720807595371	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTCTGAGCTGGAAGC	NA	False	NA	13	True	AATAAA	-19	NA	20024831	20051320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.137	chr16	+	3227	12	ISM	ENSMUSG00000041215.17	ENSMUST00000232019.2	4559	29	53739	1977	-713	348	internal_fragment	FALSE	canonical	3	138	junction_1	14.724466623799	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGATTTCTCTACAT	NA	False	NA	NA	False	AATAAA	-14	NA	20025399	20048095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446
ES.13320.138	chr16	+	7501	9	NIC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	746	-8	intron_retention	FALSE	canonical	3	167	junction_1	7.47391296443837	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGGTTTTCTGAGCTG	NA	False	NA	8	True	AATAAA	-14	NA	20026858	20051315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20038442_20040423_20040504_20041489_20041692_20046462
ES.13320.139	chr16	+	3295	13	NNC	ENSMUSG00000041215.17	novel	4559	29	NA	NA	1162	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	50.6332126397508	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	20027274	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048234_20048322_20049514
ES.13320.14	chr16	+	4478	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-3762	intron_retention	FALSE	canonical	1	1	junction_2	38.8514800232887	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAATTTGTATTTTAG	NA	False	NA	NA	False	TATAAA	-11	NA	19916324	19944209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19917762_19917864_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.140	chr16	+	3410	3	ISM	ENSMUSG00000041215.17	ENSMUST00000232338.2	4405	28	74764	-1245	-897	-6	intron_retention	FALSE	canonical	3	170	junction_1	6.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	20046424	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20046690_20047446_20047522_20048247
ES.13320.141	chr16	+	2723	3	NIC	ENSMUSG00000041215.17	novel	4405	28	NA	NA	-648	-8	intron_retention	FALSE	canonical	3	167	junction_2	8	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGGTTTTCTGAGCTG	NA	False	NA	8	True	AATAAA	-14	NA	20046673	20051315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20047522_20048247_20048322_20049514
ES.13320.15	chr16	+	3939	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	9	True	ATTAAA	-17	NA	19916324	19947971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19946763
ES.13320.16	chr16	+	7852	10	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_8	37.2512324760894	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	9	True	ATTAAA	-17	NA	19916324	19947971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19945096_19945185_19946746_19946942
ES.13320.17	chr16	+	2953	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-5123	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATCCACTTTGGTTCTC	NA	False	NA	NA	False	ATTAAA	-24	NA	19916324	19942848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.18	chr16	+	4134	6	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-3757	intron_retention	FALSE	canonical	0	0	junction_2	40.0569594452699	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916324	19944214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19925412_19926394_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.19	chr16	+	4067	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-3578	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAATCCTAGAAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	19916324	19944393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
ES.13320.2	chr16	+	4537	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-6	-3757	intron_retention	FALSE	canonical	0	0	junction_1	39.2714909317179	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916306	19944214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19919919_19920057_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.21	chr16	+	9789	35	Fusion	ENSMUSG00000041215.17_ENSMUSG00000062901.4	novel	4559	29	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_6	58.8218308578297	630	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAGCTGGAAGCAC	NA	False	NA	15	True	AATAAA	-21	NA	19916324	20051322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19988578_19988663_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.22	chr16	+	7952	11	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_9	43.8228251029073	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAGTTTTAAGTTTG	NA	False	NA	9	True	ATTAAA	-17	NA	19916325	19947971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19917762_19917864_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19945096_19945185_19946746_19946942
ES.13320.23	chr16	+	7740	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	38	394	-5	-394	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAGTGAAGAGTATGCG	NA	False	NA	NA	False	GATAAA	-18	NA	19916329	19947577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.24	chr16	+	4073	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	39	4060	-4	-4060	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTTCAAGTCATAAATT	NA	False	NA	NA	False	AATACA	-10	NA	19916330	19943911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.25	chr16	+	4312	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-3	-3757	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916331	19944214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.28	chr16	+	4297	9	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	0	-3744	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	28.9932643039724	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTTGTCTGTTGTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	19916334	19944227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19920741_19920805_19925412_19925519_19925606_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.29	chr16	+	4449	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	0	-3757	intron_retention	TRUE	canonical	2	2	junction_5	37.2472733901423	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTTAGTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	19916334	19944214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19935539_19935617_19936617_19936807_19938859_19939049_19941655
ES.13320.3	chr16	+	4401	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	17	3754	-4	-3754	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTAGTATTTTTG	NA	False	NA	NA	False	AGTAAA	-1	NA	19916308	19944217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.30	chr16	+	4343	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	0	-3292	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATCCTAGAGTCAGACT	NA	False	NA	NA	False	AATAAA	-21	NA	19916334	19944679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
ES.13320.31	chr16	+	7562	8	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	36.0905889706014	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATCTGATGAGTTTT	NA	False	NA	2	True	ATTAAA	-10	NA	19916335	19947964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942571_19943066
ES.13320.32	chr16	+	3001	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	49	5122	-1	-5122	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCCACTTTGGTTCTCA	NA	False	NA	NA	False	ATTAAA	-25	NA	19916340	19942849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.33	chr16	+	145	1	Intergenic	novelGene_11173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTACATGTAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	19919169	19919314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_19919200_19919300
ES.13320.34	chr16	+	4087	1	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	2957	-2480	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACAGTATTAATTCACC	NA	False	NA	NA	False	NA	NA	NA	19919298	19923385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19919300_19923400
ES.13320.35	chr16	+	1189	2	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	30240	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTGATGAGTTTTAA	NA	False	NA	4	True	ATTAAA	-12	NA	19946581	19947966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19946746_19946941
ES.13320.36	chr16	+	178	1	ISM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	30461	1041	30411	-1041	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGTATCACT	NA	False	NA	NA	False	NA	NA	NA	19946752	19946930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19946800_19946900
ES.13320.37	chr16	+	6245	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	-12	-121	-8	121	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGCAACCATGCAATA	NA	False	NA	NA	False	TTTAAA	-44	NA	19959804	20051444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.38	chr16	+	6208	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	38.6537478418616	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959816	20051323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20025092_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.39	chr16	+	6950	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.3294474382944	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTATGATAAAGTATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	19959816	20052134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012581_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040410_20040504_20041489_20041692_20046443_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.4	chr16	+	4518	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	-3	-3573	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCCTAGAAAATTAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	19916309	19944398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.42	chr16	+	3689	15	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	1	-5176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	52.6052395155634	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGCTCAGATTTATC	NA	False	NA	NA	False	AATACA	-14	NA	19959817	20017463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20015783
ES.13320.44	chr16	+	6102	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959817	20051323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.45	chr16	+	6031	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_29	38.3549664095259	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959819	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20049514
ES.13320.46	chr16	+	4510	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	3	-601	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	38.6354615462128	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	19959819	20049471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049261
ES.13320.47	chr16	+	5991	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	7	-1	3	1	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCTGGAAGCACCG	NA	False	NA	17	True	AATAAA	-23	NA	19959819	20051324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.48	chr16	+	10026	27	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	4	-4	intron_retention	FALSE	canonical	3	106	junction_10	25.6604189480943	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959820	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446
ES.13320.49	chr16	+	6108	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	37.6617253396012	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959820	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012581_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.5	chr16	+	4576	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	19	3577	-2	-3577	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGAATCCTAGAAAATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	19916310	19944394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.51	chr16	+	4576	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	5	1923	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.7413806670991	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGCAGGCAATCGTT	NA	False	NA	NA	False	AGTAAA	-9	NA	19959821	20053246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20052959
ES.13320.52	chr16	+	6341	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	6	247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	38.5132011999349	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCAGACTCTTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	19959822	20051570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024845_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.54	chr16	+	5974	30	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.8334744143461	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTGAGCTGGAAGCA	NA	False	NA	14	True	AATAAA	-20	NA	19959824	20051321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.55	chr16	+	7849	28	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	8	-4	intron_retention	FALSE	canonical	3	9	junction_17	38.949511831078	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959824	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446
ES.13320.56	chr16	+	6438	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	9	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	68.0317456656395	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACTCTTTGTCTAACAA	NA	False	NA	NA	False	AATAAA	-22	NA	19959825	20051576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19979424_19979525_19980725_19980888_19986229_19986403_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030469_20032006_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.57	chr16	+	6347	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	9	253	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACTCTTTGTCTAACAA	NA	False	NA	NA	False	AATAAA	-22	NA	19959825	20051576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.58	chr16	+	6299	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.4824026771586	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959825	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19995728_19995929_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.59	chr16	+	6178	30	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	47.8015865487277	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTTTCTGAGCTGG	NA	False	NA	9	True	AATAAA	-15	NA	19959826	20051316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049261
ES.13320.6	chr16	+	7659	9	NNC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_8	30.5276514000013	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGTTTTAAGTTTGGT	NA	False	NA	11	True	ATTAAA	-19	NA	19916312	19947973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655_19942564_19943057
ES.13320.60	chr16	+	6172	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.0527918241147	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTCTGAGCTGGAAGCA	NA	False	NA	14	True	AATAAA	-20	NA	19959826	20051321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19995728_19995929_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.61	chr16	+	7979	28	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	11	-6	intron_retention	FALSE	canonical	3	35	junction_1	35.4948942405352	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959827	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.62	chr16	+	6200	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.8148286667596	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959829	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19988578_19988663_19989940_19990053_19993244_19993290_19995728_19995929_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.63	chr16	+	6090	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-10	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	38.7399305913449	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959832	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012021_20012399_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.64	chr16	+	5922	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	37.819554046182	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959832	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.65	chr16	+	4187	17	ISM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	17	24674	-9	1653	intron_retention	FALSE	canonical	3	106	junction_10	27.9172885502873	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGTTTGGTTTTGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	19959833	20026649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833
ES.13320.66	chr16	+	5983	30	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	5	junction_24	44.7363262045845	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959833	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040410_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.67	chr16	+	6418	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	17	-323	-9	323	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGATGCAAGTCTTAT	NA	False	NA	NA	False	AATAAA	-28	NA	19959833	20051646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.68	chr16	+	6180	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.170254490072	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959833	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19979424_19979525_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.69	chr16	+	5838	29	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	55.3524306750178	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959833	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20049514
ES.13320.70	chr16	+	5849	29	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	48.0560365933482	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959833	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.71	chr16	+	8144	29	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-9	-6	intron_retention	FALSE	non_canonical	0	0	junction_6	54.4520946543372	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959833	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19986229_19986401_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.72	chr16	+	6073	30	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.9997156588258	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959833	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19980725_19980888_19986229_19986403_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037138_20037237_20038367_20038442_20040410_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20049514
ES.13320.73	chr16	+	5784	29	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-6	-12	combination_of_known_splicesites	FALSE	canonical	2	9	junction_18	44.8147405368787	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAATGGGTTTTCTGA	NA	False	NA	4	True	AATAAA	-10	NA	19959836	20051311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.74	chr16	+	5801	29	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-6	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	59.6012686483249	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959836	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040410_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.75	chr16	+	5801	29	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_16	45.0780926701154	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959838	20051323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.76	chr16	+	5787	29	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.2094916344819	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959838	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975875_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.78	chr16	+	4544	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	-601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	47.8592380493742	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	19959842	20049471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046405_20046690_20047446_20047522_20048247_20048322_20049261
ES.13320.79	chr16	+	5903	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	47.2604039216205	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959842	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.8	chr16	+	8713	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	4	-3754	intron_retention	FALSE	canonical	3	70	junction_1	10.9658560997307	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTAGTATTTTTG	NA	False	NA	NA	False	AGTAAA	-1	NA	19916316	19944217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ES.13320.80	chr16	+	5057	32	Fusion	ENSMUSG00000041215.17_ENSMUSG00000116913.2	novel	6112	31	NA	NA	0	388	multi-exon	FALSE	canonical	0	0	junction_30	47.3292318917941	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTCGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	19959842	20061252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20060279_20060438_20060630
ES.13320.82	chr16	+	8202	30	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_23	48.6964437975256	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959842	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20039799_20039917_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.84	chr16	+	4171	17	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	1655	intron_retention	FALSE	canonical	0	0	junction_5	46.281703660842	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTTGGTTTTGAGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	19959842	20026651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833
ES.13320.85	chr16	+	5791	29	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	38.7384446233549	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959842	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.86	chr16	+	6002	16	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	-2957	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	44.1326283931615	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTATATGCATATTT	NA	False	NA	NA	False	AATAAA	-14	NA	19959842	20019682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20015783
ES.13320.87	chr16	+	8086	2	ISM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	30	71722	0	1597	intron_retention	FALSE	canonical	3	35	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTTTAAAAAAAATTCATG	NA	False	NA	NA	False	NA	NA	NA	19959842	19979601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_19959986_19971658
ES.13320.88	chr16	+	6462	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	38.5959698529379	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCCAGGATGCAAGTC	NA	False	NA	NA	False	AATAAA	-24	NA	19959842	20051642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046405_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.9	chr16	+	6434	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	5	-3577	intron_retention	FALSE	canonical	3	70	junction_2	12.1757956618859	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGAATCCTAGAAAATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	19916317	19944394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19936807_19938859_19939049_19941655
ES.13320.90	chr16	+	3745	27	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.1013693342909	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCACCACTTGACTC	NA	False	NA	NA	False	AAGAAA	-17	NA	19959843	20041545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489
ES.13320.91	chr16	+	6155	32	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3961267519954	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGGTTTTCTGAGCTG	NA	False	NA	8	True	AATAAA	-14	NA	19959843	20051315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19961887_19961975_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.92	chr16	+	6865	31	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_17	47.7834931981979	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20025408_20025570_20026373_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.93	chr16	+	7954	28	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_4	46.1966037742424	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.94	chr16	+	4650	28	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.6177954352263	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGATTTCTCTACAT	NA	False	NA	NA	False	AATAAA	-14	NA	19959843	20048095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032199_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446
ES.13320.95	chr16	+	5973	30	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56.1743929712081	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008087_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.96	chr16	+	5918	30	NNC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	45.3213653736748	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTCTGAGCTGGAAG	NA	False	NA	12	True	AATAAA	-18	NA	19959843	20051319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046506_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.97	chr16	+	5902	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	2	9	junction_19	37.7965012316057	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.98	chr16	+	5960	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-116	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGATTTAACAGTTTC	NA	False	NA	NA	False	GATAAA	-40	NA	19959843	20051207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13320.99	chr16	+	8076	29	NNC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	1	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	48.9821265819462	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	False	NA	10	True	AATAAA	-16	NA	19959843	20051317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011905_20012017_20012393_20012577_20022404_20022664_20024833_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ES.13321.1	chr16	-	2505	1	Intergenic	novelGene_11175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAGAAAAGGAGGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	19989190	19986685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_19986700_19989200
ES.13322.1	chr16	-	3474	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	-2570	-618	-2570	618	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGCTTGATACTGCTA	NA	False	NA	NA	False	AATAAA	-29	NA	19998332	19994858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_19994900_19998300
ES.13323.1	chr16	-	3814	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	28	-562	28	562	multi-exon	FALSE	canonical	3	61	junction_2	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATGTAACTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	20060080	20051490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20054790_20055336_20055455_20059683
ES.13323.2	chr16	-	3568	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	-295	7	-295	-7	multi-exon	FALSE	canonical	3	61	junction_2	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAGTATTCAATATTAA	NA	False	NA	NA	False	AATAAA	-22	NA	20060403	20052059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20054790_20055336_20055455_20059683
ES.13323.3	chr16	-	2876	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	-30	434	-30	-434	multi-exon	FALSE	canonical	3	61	junction_2	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTGTGTATATGGCG	NA	False	NA	NA	False	AATACA	-30	NA	20060138	20052486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20054790_20055336_20055455_20059683
ES.13323.4	chr16	-	1330	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	27	1923	27	-1923	multi-exon	FALSE	canonical	3	61	junction_2	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTGTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	20060081	20053975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20054790_20055336_20055455_20059683
ES.13324.1	chr16	+	167	1	Intergenic	novelGene_11177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATATATTTATTA	NA	False	NA	NA	False	NA	NA	NA	20063993	20064160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20064000_20064200
ES.13325.1	chr16	-	178	1	Intergenic	novelGene_11178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCATGCTACA	7994	False	NA	NA	False	NA	NA	NA	20090096	20089918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20089900_20090100
ES.13326.1	chr16	+	8013	1	Antisense	novelGene_ENSMUSG00000033918.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAAGGTCCAGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	20097360	20105373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20097400_20105400
ES.13327.1	chr16	+	176	1	Intergenic	novelGene_11179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTCAGTTA	2813	False	NA	NA	False	NA	NA	NA	20115323	20115499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20115300_20115500
ES.13328.1	chr16	-	4392	7	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	-3492	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	647.208020826552	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20110482	20098569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20110095_20110265
ES.13328.10	chr16	-	3714	11	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	707.25639622417	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121119	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20109545_20110095_20110265_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.12	chr16	-	1098	9	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	40	junction_8	551.653862829764	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121086	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20120958
ES.13328.14	chr16	-	3595	10	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	556.996708548025	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121082	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20109798_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.15	chr16	-	1333	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	555.722952558197	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121131	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104580_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.16	chr16	-	1251	10	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	711.355201163401	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTTCGTTCCTTC	NA	False	NA	-20	True	AATAAA	-20	NA	20121147	20098573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20121117
ES.13328.17	chr16	-	1355	10	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_4	709.383317648523	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTTCGTTCCTTC	NA	False	NA	-20	True	AATAAA	-20	NA	20121114	20098573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104564_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.18	chr16	-	1306	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	558.240710946474	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAACAGTGTTCGTTCCT	NA	False	NA	-22	True	AATAAA	-18	NA	20121108	20098575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112110_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.19	chr16	-	1329	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	554.334725282767	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAACAGTGTTCGTTC	NA	False	NA	-24	True	AATAAA	-16	NA	20121111	20098577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104499_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.2	chr16	-	6551	10	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	558.240710946474	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121110	20098569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20110096_20110266_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.20	chr16	-	6691	9	NIC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	2	-9	intron_retention	FALSE	canonical	3	1647	junction_6	85.0858941011963	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAACAGTGTTCGTT	NA	False	NA	-25	True	AATAAA	-15	NA	20121088	20098578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.21	chr16	-	1423	11	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	703.308438737941	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121112	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20112832_20112943_20116342_20116484_20116880_20117077_20120958
ES.13328.22	chr16	-	3972	8	NIC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	9	-10	intron_retention	FALSE	canonical	3	48	junction_5	611.489983564735	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121081	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
ES.13328.23	chr16	-	1437	11	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	803.266929482348	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121110	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106440_20106511_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.24	chr16	-	1201	9	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	19	-10	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_6	752.125488199941	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121071	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104564_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
ES.13328.25	chr16	-	1248	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	554.774117085192	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121110	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105757_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.26	chr16	-	2318	10	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	555.130815414009	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAACAGTGTTCGT	NA	False	NA	-26	True	AATAAA	-14	NA	20121110	20098579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20111096_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.27	chr16	-	1838	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-2	-11	intron_retention	FALSE	canonical	0	0	junction_6	725.823380890223	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGTAAACAGTGTTCG	NA	False	NA	-27	True	AATAAA	-13	NA	20121092	20098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20109740_20109890_20112103_20112153_20116342_20117077_20120958
ES.13328.28	chr16	-	1237	9	NIC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	4	-11	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	575.510208423795	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGTAAACAGTGTTCG	NA	False	NA	-27	True	AATAAA	-13	NA	20121086	20098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
ES.13328.29	chr16	-	2779	5	NIC	ENSMUSG00000033918.17	novel	848	7	NA	NA	1	-11	intron_retention	FALSE	canonical	3	26	junction_4	752.813555935332	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGTAAACAGTGTTCG	NA	False	NA	-27	True	AATAAA	-13	NA	20121094	20098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20106703_20120958
ES.13328.3	chr16	-	7400	5	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	8031	2	4383	0	intron_retention	FALSE	canonical	3	1713	junction_4	41.0936430606974	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20112532	20098569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669
ES.13328.30	chr16	-	5085	7	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	0	-11	intron_retention	FALSE	canonical	3	48	junction_4	655.751329053595	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGTAAACAGTGTTCG	NA	False	NA	-27	True	AATAAA	-13	NA	20121111	20098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
ES.13328.31	chr16	-	5791	7	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	7	-11	intron_retention	FALSE	canonical	3	1528	junction_3	123.571391870808	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGTAAACAGTGTTCG	NA	False	NA	-27	True	AATAAA	-13	NA	20121083	20098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20101571_20101673_20101776_20104514_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.32	chr16	-	5898	7	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	1	-12	intron_retention	FALSE	canonical	3	1528	junction_3	127.451188913857	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTTGTAAACAGTGTTC	NA	False	NA	-28	True	AATAAA	-12	NA	20121089	20098581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.33	chr16	-	485	2	FSM	ENSMUSG00000033918.17	ENSMUST00000153275.2	356	2	22	-151	1	151	multi-exon	FALSE	canonical	3	1878	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATTTGGCTCCATTGC	NA	False	NA	NA	False	AATAAA	-15	NA	20121089	20116722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20117077_20120958
ES.13328.4	chr16	-	9166	9	NNC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_5	584.242030326473	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121088	20098569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20110095_20110265_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.5	chr16	-	1396	10	FSM	ENSMUSG00000033918.17	ENSMUST00000136252.8	1362	10	-36	2	-2	-2	multi-exon	FALSE	canonical	3	76	junction_6	534.615126360388	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTCGTTCCTTCAG	NA	False	NA	-18	True	AATAAA	-22	NA	20121131	20098571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.6	chr16	-	1273	10	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	8	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	554.596149363561	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121082	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101690_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.7	chr16	-	1355	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	-10	3	-10	-3	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121147	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ES.13328.8	chr16	-	1415	11	NNC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	796.949709831179	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121119	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104564_20105669_20105820_20106606_20106703_20112103_20112153_20112832_20112943_20116342_20116484_20116880_20117077_20120958
ES.13328.9	chr16	-	1380	10	NIC	ENSMUSG00000033918.17	novel	1362	10	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	699.975872600065	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	False	NA	-19	True	AATAAA	-21	NA	20121123	20098572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116477_20116880_20117077_20120958
ES.13329.1	chr16	+	174	1	Intergenic	novelGene_11180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAATGTTTGCCT	2310	False	NA	NA	False	NA	NA	NA	20126139	20126313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20126100_20126300
ES.1333.1	chr1	+	178	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132893810	132893988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132893800_132894000
ES.1333.2	chr1	+	175	2	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAATGGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	132893813	132911076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132893971_132911058
ES.13330.1	chr16	+	176	1	Intergenic	novelGene_11181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	2544	False	NA	NA	False	NA	NA	NA	20126373	20126549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20126400_20126500
ES.13331.1	chr16	-	2349	9	FSM	ENSMUSG00000022818.14	ENSMUST00000182741.2	1497	9	-188	-664	-188	558	multi-exon	TRUE	canonical	2	3	junction_8	1.5612494995996	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGCTAAATTCCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	20135688	20127861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20128732_20128831_20128974_20130978_20131167_20131777_20131920_20132477_20132652_20132947_20133109_20133704_20133855_20134622_20134786_20135329
ES.13331.2	chr16	-	3944	6	NNC	ENSMUSG00000022818.14	novel	1497	9	NA	NA	150	519	intron_retention	FALSE	canonical	0	0	junction_1	2.78567765543682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTGGAAATTAAAATAA	NA	False	NA	NA	False	AATAAA	-18	NA	20134651	20127900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20131189_20131777_20131920_20132477_20132652_20132947_20133109_20133704_20133855_20134622
ES.13332.1	chr16	+	4928	25	Antisense	novelGene_ENSMUSG00000022822.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACAACTAAAATTTCC	NA	False	NA	NA	False	NA	NA	NA	20151350	20219876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20151454_20152333_20152501_20153855_20153970_20157625_20157705_20163384_20163544_20176117_20176309_20180931_20181022_20182724_20182914_20184356_20184483_20184561_20184717_20186791_20186921_20187172_20187321_20187775_20187960_20190868_20190970_20193740_20193885_20195260_20195465_20197196_20197266_20197386_20197517_20208118_20208189_20211195_20211673_20214764_20214872_20215728_20215879_20217562_20217711_20218224_20218401_20218558
ES.13332.3	chr16	+	5178	15	Antisense	novelGene_ENSMUSG00000022822.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACAAGCAAGGCTGAC	NA	False	NA	NA	False	NA	NA	NA	20151350	20196983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20151454_20152333_20152501_20153855_20153970_20157625_20157705_20163384_20163544_20176117_20176309_20180931_20181022_20182724_20182914_20184356_20184483_20184561_20184717_20186791_20186921_20187172_20187321_20187775_20187960_20190868_20190970_20193740
ES.13332.4	chr16	+	2366	3	Antisense	novelGene_ENSMUSG00000022822.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGGTTACTCCATGCT	NA	False	NA	NA	False	NA	NA	NA	20151782	20159159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20152501_20153855_20153970_20157625
ES.13332.5	chr16	+	3579	1	Antisense	novelGene_ENSMUSG00000022822.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGGTTACTCCATGCT	2692	False	NA	NA	False	NA	NA	NA	20155580	20159159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20155600_20159200
ES.13332.6	chr16	+	178	1	Intergenic	novelGene_11183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAACACAA	NA	False	NA	NA	False	NA	NA	NA	20165109	20165287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20165100_20165300
ES.13332.7	chr16	+	177	1	Intergenic	novelGene_11184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20170940	20171117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20170900_20171100
ES.13332.8	chr16	+	2478	3	Antisense	novelGene_ENSMUSG00000022822.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCAGTGTCTGATTAG	5575	False	NA	NA	False	NA	NA	NA	20194401	20200187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_20194493_20195087_20195165_20197877
ES.13333.1	chr16	+	171	1	Intergenic	novelGene_11185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAAGACCCT	NA	False	NA	NA	False	NA	NA	NA	20242620	20242791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20242600_20242800
ES.13334.1	chr16	-	4940	2	NNC	ENSMUSG00000022822.17	novel	523	3	NA	NA	1805	2912	intron_retention	FALSE	non_canonical	0	0	junction_1	0	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	20152171	20147140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20149492_20149582
ES.13334.10	chr16	-	5415	28	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-5599	0	intron_retention	FALSE	non_canonical	0	0	junction_2	115.14349608796	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20224635	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152443_20153866_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476
ES.13334.12	chr16	-	5791	31	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	25	0	intron_retention	FALSE	canonical	2	9	junction_25	126.897355720633	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245049	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.13	chr16	-	8907	25	ISM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	22469	0	-3639	0	3prime_fragment	FALSE	canonical	3	244	junction_20	68.1710343955228	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20222675	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
ES.13334.14	chr16	-	4944	24	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	211	0	intron_retention	FALSE	canonical	3	8	junction_21	137.616546242165	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20218825	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217600_20217711_20218224_20218399_20218555
ES.13334.17	chr16	-	9639	31	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_8	141.658133076314	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245049	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184021_20184091_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20222644_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.18	chr16	-	3963	20	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	6141	0	intron_retention	FALSE	canonical	1	2	junction_19	110.211230078686	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20209012	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20208900
ES.13334.19	chr16	-	6050	30	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	91	0	intron_retention	FALSE	canonical	2	5	junction_29	115.291534515915	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20244983	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244597
ES.13334.2	chr16	-	6329	30	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-9	434	intron_retention	TRUE	canonical	3	67	junction_20	110.769119612331	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTGCTAGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	20245113	20149618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.21	chr16	-	4735	24	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-571	0	intron_retention	TRUE	canonical	3	8	junction_22	119.775325273712	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20218269	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217600_20217711_20218224
ES.13334.22	chr16	-	5758	30	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_23	132.221618808652	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245101	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217707_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20245003
ES.13334.24	chr16	-	5642	31	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_19	167.680529579316	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245102	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211556_20214764_20214873_20215729_20215879_20217600_20217711_20218224_20218399_20218555_20218790_20219197_20219236_20222575_20222644_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.25	chr16	-	5774	30	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_9	156.484544297649	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245101	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184726_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.26	chr16	-	2231	8	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	1593	0	intron_retention	FALSE	canonical	2	2	junction_7	171.532468515736	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20181163	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20181130
ES.13334.28	chr16	-	5626	29	NIC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_8	120.276652822922	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245091	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.29	chr16	-	2215	8	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	2320	0	intron_retention	FALSE	canonical	0	0	junction_6	223.920175281191	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20180436	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180062_20180109_20180375
ES.13334.3	chr16	-	1436	1	Genic_Genomic	ENSMUSG00000022822.17	novel	NA	NA	NA	NA	2518	30	mono-exon	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGTGAGGTACTTCTGA	NA	False	NA	27	True	TATAAA	-15	NA	20151458	20150022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_20150000_20151500
ES.13334.30	chr16	-	5524	29	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	119.569311083828	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245102	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187302_20190907_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.31	chr16	-	2265	8	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	1498	0	intron_retention	FALSE	canonical	0	0	junction_7	172.219485019577	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20181258	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20181191
ES.13334.32	chr16	-	5903	31	NIC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	25	0	intron_retention	FALSE	canonical	2	9	junction_25	135.256776375735	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245049	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.35	chr16	-	5617	29	NIC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	-9	0	intron_retention	FALSE	canonical	3	13	junction_4	113.349918754416	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245113	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.36	chr16	-	6113	33	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_31	165.260421262738	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245092	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214290_20214371_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20237472_20237560_20241054_20241236_20244997
ES.13334.37	chr16	-	10959	27	NIC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_5	113.745674213866	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245102	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20215879_20217562_20217711_20218224_20218399_20218555_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.38	chr16	-	5710	30	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_8	118.281743092957	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCTTGTTGTATAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	20245049	20150055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182905_20184350_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.4	chr16	-	5812	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	1	-2	1	2	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTTGTATAAAACAGTT	NA	False	NA	-1	True	AATAAA	-22	NA	20245143	20150050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.41	chr16	-	5415	24	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-288	-1	intron_retention	FALSE	canonical	0	0	junction_15	124.913641246167	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTCTTGTTGTATAAA	NA	False	NA	-7	True	AATAAA	-16	NA	20219324	20150056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195488_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
ES.13334.42	chr16	-	5859	31	NNC	ENSMUSG00000022822.17	novel	5372	31	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_30	130.123462740413	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTCTTGTTGTATAAA	NA	False	NA	-7	True	AATAAA	-16	NA	20245091	20150056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244286_20244392_20244997
ES.13334.44	chr16	-	5555	30	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_5	143.933190671687	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTCTTGTTGTATAAA	NA	False	NA	-7	True	AATAAA	-16	NA	20245101	20150056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163483_20176118_20176309_20180931_20181022_20182724_20182770_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223459_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.45	chr16	-	3276	15	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1205	-2	intron_retention	FALSE	canonical	0	0	junction_11	158.647858028852	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTTGTTGTATAA	NA	False	NA	-8	True	AATAAA	-15	NA	20194187	20150057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187775_20187961_20190869_20190970_20193740_20193885_20194136
ES.13334.47	chr16	-	4903	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	1	907	1	259	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATCGTTTTTGTACAG	NA	False	NA	NA	False	ATTAAA	-33	NA	20245143	20150959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.48	chr16	-	4233	25	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	247	259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	118.77172315927	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATCGTTTTTGTACAG	NA	False	NA	NA	False	ATTAAA	-33	NA	20218789	20150959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184350_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
ES.13334.49	chr16	-	4651	29	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	22	258	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	113.349918754416	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATCGTTTTTGTACA	NA	False	NA	NA	False	ATTAAA	-32	NA	20245052	20150960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.5	chr16	-	5942	30	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-16	0	intron_retention	FALSE	canonical	3	67	junction_20	110.769119612331	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245160	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.50	chr16	-	9335	29	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	24	258	intron_retention	FALSE	canonical	3	182	junction_26	93.037373168649	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATCGTTTTTGTACA	NA	False	NA	NA	False	ATTAAA	-32	NA	20245050	20150960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.51	chr16	-	2705	5	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-5802	258	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	216.723325925014	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATCGTTTTTGTACA	NA	False	NA	NA	False	ATTAAA	-32	NA	20159778	20150960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20158942_20159163
ES.13334.53	chr16	-	4465	25	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-88	240	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_19	137.695158219969	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCAGTGCACACTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	20219124	20150978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214290_20214371_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
ES.13334.54	chr16	-	3000	20	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	6159	221	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	110.211230078686	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGAGCACTGTGCT	NA	False	NA	NA	False	AGTAAA	-21	NA	20208994	20150997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20208900
ES.13334.55	chr16	-	4691	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	91	1029	21	137	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTTTATATGTGTAGC	NA	False	NA	NA	False	TATAAA	-20	NA	20245053	20151081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.56	chr16	-	3216	1	Intergenic	novelGene_11182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	20163383	20160167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20160200_20163400
ES.13334.57	chr16	-	5788	7	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	4	-17	intron_retention	FALSE	canonical	3	182	junction_4	82.8688723224831	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTCTCAGTGTGTGCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	20245081	20217583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20217711_20218224_20218399_20218555_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.58	chr16	-	1278	8	ISM	ENSMUSG00000022822.17	ENSMUST00000115547.9	5372	31	-16	67532	2	-21	5prime_fragment	FALSE	canonical	3	160	junction_3	84.1085304708101	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGTTTTCTCAGTGTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	20245101	20217587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.59	chr16	-	4512	5	ISM	ENSMUSG00000022822.17	ENSMUST00000077867.10	1728	11	75	8086	75	0	5prime_fragment	FALSE	canonical	2	5	junction_4	84.8627568489264	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20244661	20219510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244597
ES.13334.6	chr16	-	6033	30	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-260	0	intron_retention	FALSE	canonical	3	8	junction_22	117.918299372878	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245404	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217600_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.60	chr16	-	4546	6	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_3	97.039373452223	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245049	20219510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20223464_20224138_20224295_20224476_20224635_20224969_20225016_20241054_20241236_20244997
ES.13334.62	chr16	-	4614	5	FSM	ENSMUSG00000022822.17	ENSMUST00000134962.2	4526	5	-90	2	-20	-1	multi-exon	FALSE	canonical	3	182	junction_2	11.3578166916005	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20245164	20219511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.63	chr16	-	3366	6	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	81.0392497497355	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20245101	20219511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20219825_20221009_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.64	chr16	-	1095	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	90.516419627724	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20245101	20219511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20219785_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.66	chr16	-	1103	8	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.0812830065821	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20244671	20219511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20219785_20221009_20221085_20221197_20221236_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244597
ES.13334.67	chr16	-	3970	1	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	-4445	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	20223481	20219511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20219500_20223500
ES.13334.68	chr16	-	1112	7	NNC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	4	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.1302850849282	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACACTGCTTCC	NA	False	NA	-31	True	AATATA	-13	NA	20245099	20219532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20219825_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.69	chr16	-	2247	6	NIC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	25	-22	intron_retention	FALSE	canonical	3	9	junction_1	77.4689615265365	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACACTGCTTCC	NA	False	NA	-31	True	AATATA	-13	NA	20245049	20219532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.7	chr16	-	10367	29	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	15	0	intron_retention	FALSE	canonical	3	67	junction_20	106.320054936181	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245059	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.8	chr16	-	5680	29	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_21	143.546990635151	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245052	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187956_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ES.13334.9	chr16	-	3493	16	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1140	0	intron_retention	FALSE	canonical	2	15	junction_15	117.179330752294	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20194252	20150052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20194136
ES.13335.1	chr16	+	183	1	Intergenic	novelGene_11186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	20253124	20253307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20253100_20253300
ES.13336.1	chr16	-	3898	3	Intergenic	novelGene_11187	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	7	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACATATTTATCCCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	20273116	20266353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20269448_20270476_20271065_20272900
ES.13336.2	chr16	-	4078	2	Intergenic	novelGene_11188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTGGGGCTTATT	NA	False	NA	NA	False	NA	NA	NA	20273116	20267202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20271065_20272900
ES.13336.3	chr16	-	3372	2	Intergenic	novelGene_11189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20273118	20267910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20271065_20272900
ES.13336.4	chr16	-	1316	2	Intergenic	novelGene_11190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGCTCTTTCTACAA	NA	False	NA	NA	False	NA	NA	NA	20273145	20269993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20271065_20272900
ES.13336.5	chr16	-	1140	2	Intergenic	novelGene_11191	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATCAAAGACAGATAGA	NA	False	NA	NA	False	AATAAA	-16	NA	20273124	20270148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20271065_20272900
ES.13337.1	chr16	+	209	1	Intergenic	novelGene_11192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTCTTGCAATCCTGG	NA	False	NA	NA	False	NA	NA	NA	20278756	20278965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20278800_20279000
ES.13338.1	chr16	-	169	1	Intergenic	novelGene_11193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAATGAATTA	3559	False	NA	NA	False	NA	NA	NA	20298820	20298651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20298700_20298800
ES.13339.1	chr16	+	4144	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	-2010	29	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	739.981239204752	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGGACTGGGCTTCTC	NA	False	NA	56	True	NA	NA	NA	20315556	20328102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20315703_20316151_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.10	chr16	+	3414	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	34	-2	intron_retention	FALSE	canonical	3	2657	junction_7	160.064989989717	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317600	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20326904_20327458_20327570_20327710
ES.13339.100	chr16	+	2187	8	NNC	ENSMUSG00000003235.14	novel	1213	9	NA	NA	-13	0	intron_retention	FALSE	canonical	3	18	junction_6	1332.37035973869	1841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20323499	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325882_20326777_20326904_20327031_20327570_20327710
ES.13339.14	chr16	+	2239	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	790.171245325199	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317609	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320243_20320690_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.15	chr16	+	2513	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_9	730.113860222424	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317623	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.16	chr16	+	2700	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	63	0	intron_retention	FALSE	canonical	3	2657	junction_6	155.865981155712	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317629	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.18	chr16	+	2507	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	64	2724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	740.218271757561	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAGAGCAAAATACACAA	NA	False	NA	NA	False	NA	NA	NA	20317630	20330797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710_20328066_20330772
ES.13339.19	chr16	+	3727	13	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	72	0	intron_retention	FALSE	canonical	3	2657	junction_7	166.140732680326	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317638	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.2	chr16	+	2981	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	-589	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	740.218271757561	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTTTGTACTTGT	NA	False	NA	23	True	AGTAAA	-14	NA	20316977	20328069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317000_20317157_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.21	chr16	+	3529	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	72	0	intron_retention	FALSE	canonical	1	16	junction_7	1046.9398555908	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317638	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323338_20323541_20323948_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327031_20327570_20327710
ES.13339.22	chr16	+	3267	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	72	-4	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_14	1171.30371049622	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTTTGTACTTGT	NA	False	NA	23	True	AGTAAA	-14	NA	20317638	20328069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325411_20325882_20326777_20326904_20327031_20327570_20327710
ES.13339.23	chr16	+	2490	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	764.3793124708	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317638	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321079_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.24	chr16	+	5496	6	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	72	2705	intron_retention	TRUE	non_canonical	0	0	junction_5	1196.36198535393	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20317638	20330778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20321593_20323394_20323541_20323948_20326180_20329471
ES.13339.25	chr16	+	4071	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	72	-1589	72	1589	multi-exon	FALSE	canonical	3	2657	junction_7	154.998007155648	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGAGAAGTGCCTATGA	NA	False	NA	NA	False	ATTAAA	-19	NA	20317638	20329662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.27	chr16	+	2462	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1027.48137371601	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323955_20324091_20324211_20324314_20324877_20324986_20325130_20325211_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.3	chr16	+	4214	12	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	-18	0	intron_retention	FALSE	canonical	3	2657	junction_5	178.491197088306	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317548	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320558_20320653_20321071_20321279_20321593_20323394_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20326904_20327458_20327570_20327710
ES.13339.30	chr16	+	2475	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	763.21630543961	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323533_20323945_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.31	chr16	+	2946	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	753.166459393643	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20327370_20327458_20327570_20327710
ES.13339.32	chr16	+	8514	12	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	2724	intron_retention	FALSE	canonical	3	2857	junction_6	144.947924533076	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAGAGCAAAATACACAA	NA	False	NA	NA	False	NA	NA	NA	20317640	20330797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20324091_20324211_20324986_20325130_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.33	chr16	+	2558	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	753.166459393643	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326982_20327458_20327570_20327710
ES.13339.34	chr16	+	2914	13	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	intron_retention	FALSE	canonical	3	2657	junction_4	169.557184716216	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.35	chr16	+	2391	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	758.653848749364	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317758_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.36	chr16	+	2503	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	758.653848749364	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318911_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.38	chr16	+	2421	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	30	junction_1	733.108724776721	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317710_20317767_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.39	chr16	+	2474	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	762.674405555142	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320749_20321011_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.4	chr16	+	2508	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	760.821117828188	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317562	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325174_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.43	chr16	+	2502	16	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	2	51	junction_15	744.693911766588	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327687
ES.13339.44	chr16	+	3815	12	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	intron_retention	FALSE	canonical	3	69	junction_5	863.966778899121	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20321071_20321279_20321603_20323394_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.46	chr16	+	3066	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	intron_retention	FALSE	canonical	2	51	junction_14	767.75570094043	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327687
ES.13339.47	chr16	+	3927	14	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	intron_retention	FALSE	canonical	3	140	junction_9	777.173988424744	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20326904_20327458_20327570_20327710
ES.13339.5	chr16	+	1017	1	Genic_Genomic	ENSMUSG00000003235.14	novel	NA	NA	NA	NA	-4	-9494	mono-exon	FALSE	NA	NA	NA	NA	NA	1723	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTAAGGCTAACGAC	NA	False	NA	NA	False	NA	NA	NA	20317562	20318579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_20317600_20318600
ES.13339.50	chr16	+	2906	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	748.746282498655	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327031_20327570_20327710
ES.13339.53	chr16	+	6519	12	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	2724	intron_retention	FALSE	canonical	3	2657	junction_6	144.520066381028	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAGAGCAAAATACACAA	NA	False	NA	NA	False	NA	NA	NA	20317641	20330797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20325882_20326777_20327570_20327710
ES.13339.54	chr16	+	3560	12	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	-2	intron_retention	FALSE	canonical	3	2657	junction_4	171.577320352965	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317641	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320558_20320653_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.55	chr16	+	4687	14	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	-2	intron_retention	FALSE	canonical	3	2857	junction_6	134.767869680517	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317641	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.56	chr16	+	3604	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	76	0	intron_retention	FALSE	canonical	0	0	junction_1	784.91862310558	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317642	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317752_20317834_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.57	chr16	+	2265	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	790.171245325199	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317642	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320282_20320670_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.58	chr16	+	2734	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	76	-2	intron_retention	FALSE	canonical	3	2657	junction_6	160.411715181114	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317642	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.59	chr16	+	517	3	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	76	7772	76	-7772	5prime_fragment	FALSE	canonical	3	3054	junction_2	53.5	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGGGGAAGACTGCAG	NA	False	NA	NA	False	NA	NA	NA	20317642	20320301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20317847_20318934_20319060_20320113
ES.13339.62	chr16	+	2389	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1063.3837117275	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317642	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324093_20324211_20324314_20324877_20324986_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.63	chr16	+	3334	13	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	76	-2	intron_retention	FALSE	canonical	1	16	junction_7	844.843620473964	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317642	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323338_20323541_20323948_20324314_20324877_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.65	chr16	+	3397	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	79	0	intron_retention	FALSE	canonical	3	69	junction_7	1031.14140491922	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317645	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321603_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20326904_20327458_20327570_20327710
ES.13339.66	chr16	+	4631	13	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	79	0	intron_retention	FALSE	canonical	3	2857	junction_4	137.526638833678	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317645	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20321071_20321279_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.68	chr16	+	2461	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	82	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	762.674405555142	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317648	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20321001_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.7	chr16	+	3095	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	21	0	intron_retention	FALSE	canonical	1	18	junction_14	774.583522063994	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317587	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325882_20326777_20326904_20327458_20327570_20327684
ES.13339.70	chr16	+	2401	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	84	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	740.218271757561	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317650	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317699_20317765_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.71	chr16	+	2443	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	763.442612265141	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317650	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321566_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.72	chr16	+	4241	13	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	84	-2	intron_retention	FALSE	canonical	3	2657	junction_6	162.04789672604	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317650	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.73	chr16	+	3023	14	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	84	-2	intron_retention	FALSE	canonical	1	19	junction_7	809.683070439424	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317650	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20324009_20324091_20324211_20324314_20324877_20324986_20325130_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.74	chr16	+	4826	13	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	85	0	intron_retention	FALSE	canonical	1	18	junction_12	838.559114725306	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317651	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327684
ES.13339.75	chr16	+	3555	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	85	-2	intron_retention	FALSE	canonical	3	2657	junction_6	153.681356005449	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317651	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.78	chr16	+	2813	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_12	754.71340844647	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317653	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325411_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.79	chr16	+	2461	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	87	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	764.3793124708	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317653	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321074_20321286_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.8	chr16	+	3086	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	32	0	intron_retention	FALSE	canonical	3	2657	junction_7	160.083651601917	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317598	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.80	chr16	+	3036	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	87	-5	intron_retention	FALSE	canonical	3	69	junction_7	770.463205494207	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGTTGTTTGTACTTG	NA	False	NA	22	True	AGTAAA	-13	NA	20317653	20328068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321603_20323394_20323541_20323948_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.84	chr16	+	3175	14	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	88	0	intron_retention	FALSE	canonical	3	2657	junction_7	161.538498168494	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317654	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.86	chr16	+	3435	14	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	89	-2	intron_retention	FALSE	canonical	3	2657	junction_7	166.039312376431	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317655	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.87	chr16	+	3484	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	90	0	intron_retention	FALSE	canonical	3	18	junction_13	1162.1918640607	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317656	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20326904_20327031_20327140_20327458_20327570_20327710
ES.13339.88	chr16	+	3033	15	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	90	-2	intron_retention	FALSE	canonical	3	140	junction_9	743.65750839746	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317656	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20327570_20327710
ES.13339.89	chr16	+	2458	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_15	746.651565323478	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317656	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327716
ES.13339.9	chr16	+	2514	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	753.166459393643	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317598	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327464_20327570_20327710
ES.13339.91	chr16	+	4334	14	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	100	-2	intron_retention	FALSE	canonical	3	2857	junction_5	131.611585612573	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317666	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320558_20320653_20320735_20320992_20321071_20321279_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.92	chr16	+	1917	13	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	1	109	junction_5	820.218009637275	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317666	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.93	chr16	+	2518	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	758.164614198145	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317672	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317917_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.94	chr16	+	2411	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	125	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	763.21630543961	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20317691	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323964_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.95	chr16	+	2456	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	125	2724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	994.482338251288	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAGAGCAAAATACACAA	NA	False	NA	NA	False	NA	NA	NA	20317691	20330797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321603_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710_20328066_20330772
ES.13339.96	chr16	+	2405	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1031.50294662153	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317700	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321062_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326783_20326904_20327458_20327570_20327710
ES.13339.97	chr16	+	1965	13	ISM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	2811	0	2811	0	3prime_fragment	FALSE	canonical	3	2657	junction_4	163.296169241317	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20320377	20328073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ES.13339.98	chr16	+	2361	13	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	2857	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1278.02375651716	1842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGTTGTTTGTACTTG	NA	False	NA	22	True	AGTAAA	-13	NA	20320423	20328068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323390_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327031_20327570_20327710
ES.13339.99	chr16	+	3285	6	NNC	ENSMUSG00000003235.14	novel	1213	9	NA	NA	-80	-2	intron_retention	FALSE	canonical	3	140	junction_2	1187.70629366018	1841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTTTGTACTTGTTA	NA	False	NA	25	True	AGTAAA	-16	NA	20323432	20328071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20323541_20323948_20324107_20324211_20324986_20325130_20326904_20327458_20327570_20327710
ES.1334.1	chr1	+	3299	2	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132918522	132929517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132920239_132927934
ES.1334.2	chr1	+	2520	7	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGCCCCAGCTAACTAT	NA	False	NA	NA	False	NA	NA	NA	132918522	132937396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132919963_132922239_132922324_132924302_132924447_132929019_132929182_132931528_132931629_132932391_132932460_132936874
ES.1334.3	chr1	+	1213	1	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCTTTAGGCCTAACAA	NA	False	NA	NA	False	TTTAAA	-3	NA	132918522	132919735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132918500_132919700
ES.1334.4	chr1	+	2194	4	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGATGATGATCACTT	NA	False	NA	NA	False	NA	NA	NA	132918522	132929545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132919963_132922239_132922324_132924302_132924447_132929019
ES.1334.5	chr1	+	2347	1	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132937256	132939603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132937300_132939600
ES.13340.1	chr16	-	84	1	Intergenic	novelGene_11194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	8665	False	NA	-3	True	NA	NA	NA	20316510	20316426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20316400_20316500
ES.13341.1	chr16	-	179	1	Intergenic	novelGene_11195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	5225	False	NA	NA	False	NA	NA	NA	20333453	20333274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20333300_20333500
ES.13342.102	chr16	+	1996	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-4	-153	intron_retention	FALSE	non_canonical	0	0	junction_4	883.776590393972	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTGCTGGCTAAATGT	1390	False	NA	NA	False	AATAAA	-9	NA	20354264	20362653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.104	chr16	+	1755	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1107.07793562854	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1393	False	NA	NA	False	AATAAA	-12	NA	20354267	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.106	chr16	+	2333	9	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	5	-151	intron_retention	FALSE	non_canonical	0	0	junction_4	926.389227053078	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTGGCTAAATGTTA	1399	False	NA	NA	False	AATAAA	-11	NA	20354273	20362655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
ES.13342.107	chr16	+	4102	6	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	9	-12	intron_retention	FALSE	canonical	3	317	junction_3	1033.02398810483	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGCCAGACTTTGTTTT	1403	False	NA	5	True	NA	NA	NA	20354277	20362794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20359564_20359724_20360842_20360946_20361501_20362060
ES.13342.109	chr16	+	1892	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	9	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTAAATGTTAATGGGG	1403	False	NA	NA	False	AATAAA	-17	NA	20354277	20362661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.111	chr16	+	2467	9	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-14	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	926.389227053078	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTTGTTTTGTTTGG	1410	False	NA	11	True	NA	NA	NA	20354284	20362800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
ES.13342.112	chr16	+	2271	11	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-14	-150	intron_retention	FALSE	canonical	3	317	junction_4	750.589828068566	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1410	False	NA	NA	False	AATAAA	-12	NA	20354284	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359564_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.115	chr16	+	1880	12	NNC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-12	3017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1054.32479666349	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTGAGGTGTATC	1412	False	NA	NA	False	AATAAA	-23	NA	20354286	20366676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060_20362151_20366168
ES.13342.116	chr16	+	2898	11	NNC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-12	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAGCTAATCCCCATG	1412	False	NA	NA	False	NA	NA	NA	20354286	20363676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.117	chr16	+	3020	10	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-4	-150	intron_retention	FALSE	canonical	3	317	junction_3	789.61861398751	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1420	False	NA	NA	False	AATAAA	-12	NA	20354294	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20359564_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.118	chr16	+	2703	9	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-3	-150	intron_retention	FALSE	canonical	3	317	junction_4	826.192386417958	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1421	False	NA	NA	False	AATAAA	-12	NA	20354295	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359564_20359724_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
ES.13342.119	chr16	+	1843	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-3	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1252.39544873015	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1421	False	NA	NA	False	AATAAA	-12	NA	20354295	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359964_20360102_20360496_20360617_20360719_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.12	chr16	+	4821	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-28	-2	intron_retention	TRUE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	13	True	NA	NA	NA	20335703	20352758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351349_20351411
ES.13342.120	chr16	+	2351	10	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	5	-150	intron_retention	FALSE	canonical	3	317	junction_4	788.519303097917	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1429	False	NA	NA	False	AATAAA	-12	NA	20354303	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359564_20359724_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.121	chr16	+	1732	12	NNC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	6	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1054.32479666349	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1430	False	NA	NA	False	AATAAA	-12	NA	20354304	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060_20362276_20362403
ES.13342.122	chr16	+	2010	11	NNC	ENSMUSG00000022841.16	novel	655	7	NA	NA	-471	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1067.59667009597	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCAGACTTTGTTTTGT	3016	False	NA	7	True	NA	NA	NA	20355890	20362796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20355948_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.123	chr16	+	1918	11	NNC	ENSMUSG00000022841.16	novel	655	7	NA	NA	-426	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1067.59667009597	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	3061	False	NA	NA	False	AATAAA	-12	NA	20355935	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20356041_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.124	chr16	+	1931	11	NNC	ENSMUSG00000022841.16	novel	655	7	NA	NA	-404	-151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1067.20682625253	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTGGCTAAATGTTA	3083	False	NA	NA	False	AATAAA	-11	NA	20355957	20362655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20356077_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.125	chr16	+	1902	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-83	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	855.282900276963	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	3404	False	NA	NA	False	AATAAA	-12	NA	20356278	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.126	chr16	+	1714	9	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-1316	-133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	886.269111218483	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGGGCCCGCAGAGGGT	5182	False	NA	NA	False	AATAAA	-29	NA	20358056	20362673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.13	chr16	+	4803	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	14	True	NA	NA	NA	20335720	20352759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351356_20351420
ES.13342.14	chr16	+	4951	15	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_14	67.0207095620755	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	16	True	NA	NA	NA	20335720	20352761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345729_20345831_20346001_20346170_20349526_20349743_20349829_20351314_20351377
ES.13342.16	chr16	+	4000	17	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	62.7429963721051	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	13	True	NA	NA	NA	20335722	20352758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20351033_20351349_20351420
ES.13342.17	chr16	+	4190	25	Fusion	ENSMUSG00000003233.13_ENSMUSG00000022841.16	novel	3983	16	NA	NA	-6	-149	multi-exon	FALSE	non_canonical	0	0	junction_15	1166.68908311798	1611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	20335725	20362657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345863_20346001_20346170_20349526_20349743_20349829_20350241_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.18	chr16	+	2874	13	NIC	ENSMUSG00000003233.13	novel	2519	15	NA	NA	-5	1	intron_retention	FALSE	canonical	3	164	junction_10	16.3392846300633	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGTGTCTCTACTCAT	NA	False	NA	NA	False	AATAAA	-38	NA	20335726	20350422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.2	chr16	+	2591	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	-69	-3	-69	3	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTCTCTACTCATCC	NA	False	NA	NA	False	AATAAA	-40	NA	20335662	20350424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.20	chr16	+	4722	14	NIC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_11	52.4228370670059	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	15	True	NA	NA	NA	20335735	20352760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20346001_20346170_20349526_20349743_20349829
ES.13342.21	chr16	+	4868	15	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	6	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	50.7160965471476	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	14	True	NA	NA	NA	20335737	20352759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20351349_20351418
ES.13342.23	chr16	+	4816	24	Fusion	ENSMUSG00000003233.13_ENSMUSG00000022841.16	novel	3983	16	NA	NA	14	-151	intron_retention	FALSE	non_canonical	0	0	junction_1	1133.05354028032	1611	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTGGCTAAATGTTA	NA	False	NA	NA	False	AATAAA	-11	NA	20335745	20362655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_20336106_20338022_20338183_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
ES.13342.24	chr16	+	4787	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	15	-4	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	11	True	NA	NA	NA	20335746	20352756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351326_20351377
ES.13342.26	chr16	+	3683	13	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	23	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	71.471245189159	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	6	True	NA	NA	NA	20335754	20352751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345106_20350329_20351312_20351377
ES.13342.27	chr16	+	2004	5	ISM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	23	6381	23	-29	intron_retention	FALSE	canonical	3	168	junction_3	8.347903928532	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20335754	20344040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689
ES.13342.28	chr16	+	4776	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	23	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	14	True	NA	NA	NA	20335754	20352759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351320_20351377
ES.13342.29	chr16	+	4751	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	24	-5	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	10	True	NA	NA	NA	20335755	20352755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351300_20351377
ES.13342.3	chr16	+	4937	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	-65	-2353	-65	14	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTATTATTATTATTAA	NA	False	NA	29	True	NA	NA	NA	20335666	20352774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.30	chr16	+	5230	13	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	25	-9	intron_retention	FALSE	non_canonical	0	0	junction_12	53.7463177033243	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	6	True	NA	NA	NA	20335756	20352751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343339_20344388_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351308_20351377
ES.13342.31	chr16	+	3375	12	NIC	ENSMUSG00000003233.13	novel	2519	15	NA	NA	26	1	intron_retention	FALSE	canonical	3	164	junction_9	17.0560573084488	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGTGTCTCTACTCAT	NA	False	NA	NA	False	AATAAA	-38	NA	20335757	20350422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.33	chr16	+	5289	15	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	39	3	intron_retention	FALSE	non_canonical	0	0	junction_14	50.557907797063	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	18	True	NA	NA	NA	20335770	20352763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345831_20346001_20346170_20349526_20349743_20349829_20351313_20351377
ES.13342.34	chr16	+	4743	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	41	-2	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	13	True	NA	NA	NA	20335772	20352758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351306_20351377
ES.13342.36	chr16	+	4983	14	NIC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	164	junction_11	15.9614921222682	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	7	True	NA	NA	NA	20335774	20352752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.37	chr16	+	4766	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-39	0	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	15	True	NA	NA	NA	20335774	20352760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351373_20351421
ES.13342.38	chr16	+	4643	15	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-37	-8	intron_retention	FALSE	non_canonical	0	0	junction_14	65.5328239923183	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	7	True	NA	NA	NA	20335776	20352752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351310_20351377
ES.13342.39	chr16	+	4691	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_10	64.8261264203459	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	15	True	NA	NA	NA	20335783	20352760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345067_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351314_20351377
ES.13342.4	chr16	+	4842	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-51	3	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	18	True	NA	NA	NA	20335680	20352763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351308_20351377
ES.13342.47	chr16	+	4701	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-22	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	64.8576561059337	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	9	True	NA	NA	NA	20335791	20352754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336085_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351349_20351418
ES.13342.53	chr16	+	3872	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	107	-1460	-17	-879	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGACTTATCCAGACTCT	NA	False	NA	NA	False	TATAAA	-1	NA	20335838	20351881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.55	chr16	+	4941	14	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-3	11	intron_retention	FALSE	canonical	0	0	junction_3	52.4396525518935	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	26	True	NA	NA	NA	20335852	20352771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342384_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.56	chr16	+	4668	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	4	-10	intron_retention	FALSE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	5	True	NA	NA	NA	20335859	20352750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351373_20351424
ES.13342.57	chr16	+	2526	14	NIC	ENSMUSG00000003233.13	novel	2519	15	NA	NA	23	3	intron_retention	FALSE	canonical	3	164	junction_11	15.9614921222682	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTTGCTGGTAGCAGCA	NA	False	NA	NA	False	AATAAA	-15	NA	20335878	20350399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.58	chr16	+	2549	2	NNC	ENSMUSG00000003233.13	novel	2936	4	NA	NA	5452	-34	intron_retention	TRUE	non_canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	20341387	20344035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20341500_20341598
ES.13342.59	chr16	+	4831	12	NIC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	5985	2	intron_retention	FALSE	canonical	3	164	junction_9	17.3248018843096	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	17	True	NA	NA	NA	20341920	20352762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20342282_20342401_20342512_20342689_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.6	chr16	+	4861	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-51	-8	intron_retention	TRUE	non_canonical	0	0	junction_15	64.4726987870749	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	7	True	NA	NA	NA	20335680	20352752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345863_20346001_20346170_20349526_20349743_20349829_20351349_20351420
ES.13342.60	chr16	+	4348	14	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	6223	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	52.2432861403794	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	14	True	NA	NA	NA	20342158	20352759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351312_20351377
ES.13342.63	chr16	+	3509	7	NIC	ENSMUSG00000003233.13	novel	2519	15	NA	NA	7019	0	intron_retention	FALSE	canonical	3	164	junction_4	19.8746069143518	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGGTGTCTCTACTCA	NA	False	NA	NA	False	AATAAA	-37	NA	20342954	20350421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20344529_20344655_20344733_20344838_20344907_20345016_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.64	chr16	+	5144	6	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	7947	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	81.1600887136036	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	7	True	NA	NA	NA	20343882	20352752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20344733_20344838_20344907_20345016_20346170_20349526_20349743_20349829_20351312_20351377
ES.13342.66	chr16	+	3585	7	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	8902	-9	intron_retention	FALSE	non_canonical	0	0	junction_6	69.1289053548192	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	6	True	NA	NA	NA	20344837	20352751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351349_20351420
ES.13342.67	chr16	+	4214	4	NIC	ENSMUSG00000003233.13	novel	2319	15	NA	NA	8990	-6	intron_retention	FALSE	canonical	3	164	junction_1	13.0979218029257	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	9	True	NA	NA	NA	20344925	20352754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20345831_20346001_20346170_20349526_20349743_20349829
ES.13342.68	chr16	+	7405	1	Genic_Genomic	ENSMUSG00000003233.13	novel	NA	NA	NA	NA	9421	1	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	16	True	NA	NA	NA	20345356	20352761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_20345400_20352800
ES.13342.69	chr16	+	1933	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	-3	150	-3	-150	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1350	False	NA	NA	False	AATAAA	-12	NA	20354224	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.7	chr16	+	4829	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-40	1	intron_retention	TRUE	non_canonical	0	0	junction_15	49.0181825675149	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATTATTA	NA	False	NA	16	True	NA	NA	NA	20335691	20352761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20351349_20351418
ES.13342.70	chr16	+	2083	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	1357	False	NA	17	True	NA	NA	NA	20354231	20362806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.72	chr16	+	1951	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	12	-151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1079.27779556516	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTGGCTAAATGTTA	1367	False	NA	NA	False	AATAAA	-11	NA	20354241	20362655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359716_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360918_20361045_20361388_20361501_20362060
ES.13342.74	chr16	+	2329	11	NNC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	13	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTGTTT	1368	False	NA	NA	False	NA	NA	NA	20354242	20363063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.75	chr16	+	2162	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	13	-9	intron_retention	FALSE	non_canonical	0	0	junction_4	883.776590393972	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGACTTTGTTTTGTT	1368	False	NA	8	True	NA	NA	NA	20354242	20362797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.77	chr16	+	1823	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	14	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1104.63154015544	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1369	False	NA	NA	False	AATAAA	-12	NA	20354243	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20361388_20361501_20362060
ES.13342.78	chr16	+	2354	9	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	14	-150	intron_retention	FALSE	non_canonical	0	0	junction_4	927.068489581541	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1369	False	NA	NA	False	AATAAA	-12	NA	20354243	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360842_20360946_20361501_20362060
ES.13342.8	chr16	+	4094	16	NNC	ENSMUSG00000003233.13	novel	3983	16	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	63.4932717345354	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	12	True	NA	NA	NA	20335696	20352757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342692_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20351033
ES.13342.83	chr16	+	2054	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGACTTTGTTTTGTT	1378	False	NA	8	True	NA	NA	NA	20354252	20362797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359174_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.84	chr16	+	2256	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-16	-150	intron_retention	FALSE	non_canonical	0	0	junction_4	874.256184732605	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1378	False	NA	NA	False	AATAAA	-12	NA	20354252	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
ES.13342.85	chr16	+	2040	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	839.977833040849	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGACTTTGTTTTGTT	1378	False	NA	8	True	NA	NA	NA	20354252	20362797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359730_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.88	chr16	+	1768	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-15	-150	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	883.776590393972	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1379	False	NA	NA	False	AATAAA	-12	NA	20354253	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.89	chr16	+	1912	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-15	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	839.977833040849	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1379	False	NA	NA	False	AATAAA	-12	NA	20354253	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359174_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.90	chr16	+	1959	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1104.63154015544	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTGTTTTGTTTGGGT	1379	False	NA	13	True	NA	NA	NA	20354253	20362802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20361388_20361501_20362060
ES.13342.91	chr16	+	2039	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1228.6612063543	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGACTTTGTTTTGTT	1380	False	NA	8	True	NA	NA	NA	20354254	20362797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358060_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360707_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.92	chr16	+	1905	11	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-13	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1105.08490624024	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTGGCTAAATGTTAA	1381	False	NA	NA	False	AATAAA	-12	NA	20354255	20362656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360610_20360702_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.93	chr16	+	2445	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-13	-9	intron_retention	FALSE	non_canonical	0	0	junction_4	878.165146593372	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGACTTTGTTTTGTT	1381	False	NA	8	True	NA	NA	NA	20354255	20362797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.94	chr16	+	2128	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	1164.55966351087	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGACTTTGTTTTGTTTG	1381	False	NA	10	True	NA	NA	NA	20354255	20362799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359972_20360102_20360496_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.96	chr16	+	2142	10	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-13	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	884.741826051777	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTTGTTTTGTTTGG	1381	False	NA	11	True	NA	NA	NA	20354255	20362800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20359861_20359959_20360102_20360496_20360842_20360946_20361045_20361388_20361501_20362060
ES.13342.98	chr16	+	2834	7	NNC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	-13	-152	intron_retention	FALSE	non_canonical	0	0	junction_4	1058.55451756944	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTGCTGGCTAAATGTT	1381	False	NA	NA	False	AATAAA	-10	NA	20354255	20362654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359717_20360842_20360946_20361501_20362060
ES.13342.99	chr16	+	4049	6	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	-13	-149	intron_retention	FALSE	canonical	3	2232	junction_3	275.840098607871	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGGCTAAATGTTAAT	1381	False	NA	NA	False	AATAAA	-13	NA	20354255	20362657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20354352_20356367_20356485_20358057_20359861_20359959_20360842_20360946_20361501_20362060
ES.13343.1	chr16	-	3209	2	Genic_Genomic	ENSMUSG00000080797.3	novel	3245	1	NA	NA	3	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTCCCCCCTCACCA	4968	False	NA	NA	False	AATAAA	-11	NA	20367203	20363961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_20366015_20366047
ES.13343.2	chr16	-	3249	1	FSM	ENSMUSG00000080797.3	ENSMUST00000231978.2	3245	1	-45	41	-45	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGCTGTGCCTCCTCAAA	4920	False	NA	NA	False	TTTAAA	-25	NA	20367251	20364002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20364000_20367300
ES.13344.1	chr16	+	3332	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	0	-242	0	242	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGATTGTAGTCATG	NA	False	NA	NA	False	ATTAAA	-30	NA	20367326	20380371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.10	chr16	+	2465	20	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.133629439347	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367401	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370648_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.12	chr16	+	5158	18	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	15	1406	intron_retention	FALSE	canonical	2	11	junction_12	75.0475281930676	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCACCTCTCACCTG	NA	False	NA	NA	False	NA	NA	NA	20367408	20381535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371072_20371210_20371303_20371381_20377309_20377355_20377446_20378483_20378664_20378798_20378932
ES.13344.13	chr16	+	3322	20	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	82	-228	15	228	intron_retention	FALSE	canonical	3	293	junction_13	17.1880587292715	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTCTCAGCCTACTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	20367408	20380357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932
ES.13344.14	chr16	+	2479	21	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	97.6772235477647	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTGCCTCTCTGCTC	NA	False	NA	4	True	ATTAAA	-13	NA	20367408	20379568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370458_20370566_20370613_20370711_20370735_20370848_20370905_20370969_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.15	chr16	+	2478	20	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	15	-1	intron_retention	FALSE	canonical	2	6	junction_2	98.1505147500835	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367408	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367868_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371072_20371210_20371303_20371381_20377309_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.16	chr16	+	2907	20	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	15	-1	intron_retention	FALSE	canonical	3	293	junction_13	17.9912259317234	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367408	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.17	chr16	+	7662	22	Fusion	ENSMUSG00000003234.17_ENSMUSG00000116604.2	novel	3090	21	NA	NA	-16	1230	multi-exon	FALSE	non_canonical	0	0	junction_21	70.6046127237341	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTGAGTCTAGGGTA	NA	False	NA	NA	False	NA	NA	NA	20367409	20388488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106_20382447_20386150
ES.13344.19	chr16	+	5319	17	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-16	1412	intron_retention	FALSE	canonical	3	293	junction_13	18.4033582193577	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCTCACCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	20367409	20381541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20378483_20378664_20378798_20378932
ES.13344.2	chr16	+	2514	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	20	556	20	5	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTCTCTGCTCGTTCA	NA	False	NA	9	True	ATTAAA	-18	NA	20367346	20379573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.20	chr16	+	2343	21	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	72.1086679949089	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367411	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370869_20371072_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.24	chr16	+	3162	19	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	293	junction_13	18.4588297316414	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367414	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.25	chr16	+	3142	21	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-11	221	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	72.1245277280898	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGGGACTGTCTCAGC	NA	False	NA	NA	False	ATTAAA	-9	NA	20367414	20380350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377499_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.26	chr16	+	2534	20	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	294	junction_7	16.8429276115026	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367414	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.27	chr16	+	2527	20	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	89	560	-10	1	intron_retention	FALSE	canonical	3	293	junction_13	17.1880587292715	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGCCTCTCTGCTCG	NA	False	NA	5	True	ATTAAA	-14	NA	20367415	20379569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932
ES.13344.28	chr16	+	3276	18	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	4	junction_12	77.327327452423	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20367415	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20370985_20371210_20371303_20371381_20377309_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.29	chr16	+	4353	21	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-10	1421	combination_of_known_junctions	FALSE	canonical	1	6	junction_7	95.8837316753994	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCTGCCTCAATGT	NA	False	NA	NA	False	NA	NA	NA	20367415	20381550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370228_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371072_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.3	chr16	+	2921	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	40	129	-27	-129	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGATTTATGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	20367366	20380000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.30	chr16	+	2418	20	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-10	5	intron_retention	FALSE	canonical	0	0	junction_4	130.937615984783	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTCTCTGCTCGTTCA	NA	False	NA	9	True	ATTAAA	-18	NA	20367415	20379573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368757_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370395_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371072_20371210_20371303_20371381_20377309_20377355_20377489_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932
ES.13344.32	chr16	+	2351	13	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-97	-1	intron_retention	FALSE	canonical	3	293	junction_7	13.5305723784653	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTTGCCTCTCTGCT	NA	False	NA	3	True	ATTAAA	-12	NA	20369229	20379567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20378130_20378390_20378483_20378664_20378798_20378932
ES.13344.33	chr16	+	3910	14	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	2550	-1405	-534	1405	3prime_fragment	FALSE	canonical	3	293	junction_6	14.251336488764	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACCACCTCTCACCT	NA	False	NA	NA	False	NA	NA	NA	20369876	20381534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.34	chr16	+	4664	1	Genic_Genomic	ENSMUSG00000003234.17	novel	NA	NA	NA	NA	746	3687	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGACAGA	NA	False	NA	NA	False	NA	NA	NA	20379152	20383816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_20379200_20383800
ES.13344.4	chr16	+	3073	20	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-25	-3	intron_retention	FALSE	canonical	2	11	junction_12	71.8071054131249	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGACACGTGCAAGAGC	NA	False	NA	7	True	AATAAA	-16	NA	20367368	20380126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371072_20371210_20371303_20371381_20377309_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.6	chr16	+	2525	21	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	-1	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	72.2056784470584	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATCCCCTCCTGGATCT	NA	False	NA	-13	True	NA	NA	NA	20367392	20379551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378209_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.7	chr16	+	2487	21	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	71.4748032526148	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCTCTCTGCTCGTTC	NA	False	NA	8	True	ATTAAA	-17	NA	20367395	20379572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20370985_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.8	chr16	+	4426	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	69	-1405	2	1405	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACCACCTCTCACCT	NA	False	NA	NA	False	NA	NA	NA	20367395	20381534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13344.9	chr16	+	3019	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	73	-2	6	2	multi-exon	FALSE	canonical	3	293	junction_13	17.6705970470723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACGTGCAAGAGCATGTG	NA	False	NA	12	True	AATAAA	-21	NA	20367399	20380131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ES.13345.1	chr16	-	3287	1	Antisense	novelGene_ENSMUSG00000003234.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTCCTCTGACAC	NA	False	NA	NA	False	AAAAAG	-5	NA	20379047	20375760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_20375800_20379000
ES.13346.2	chr16	+	4392	21	NNC	ENSMUSG00000046613.20	novel	4527	23	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.28354976529934	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGAGTTGTTCGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	20408890	20424127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20409032_20409422_20409649_20409901_20410051_20410129_20410301_20412929_20413150_20413316_20413475_20414069_20414202_20414445_20414571_20414924_20415081_20415769_20415881_20415972_20416182_20416262_20416375_20416837_20417024_20419377_20419550_20419636_20419951_20420297_20420488_20420585_20420940_20422597_20422736_20422815_20422897_20422995_20423202_20423286
ES.13346.3	chr16	+	3402	1	FSM	ENSMUSG00000080669.3	ENSMUST00000117019.3	85	1	-2478	-839	-2478	839	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATGAGTTGTTCGTT	NA	False	NA	NA	False	AATAAA	-15	NA	20420723	20424125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20420700_20424100
ES.13346.4	chr16	+	1270	3	NNC	ENSMUSG00000046613.20	novel	4527	23	NA	NA	-792	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGAGTTGTTCGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	20420732	20424127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20420940_20422979_20423202_20423286
ES.13347.1	chr16	-	176	1	Intergenic	novelGene_11196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAATTAAAAATA	7738	False	NA	NA	False	NA	NA	NA	20418655	20418479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20418500_20418700
ES.13348.1	chr16	-	1507	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.475578621378	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCAGTCTTAAGAGGC	NA	False	NA	46	True	NA	NA	NA	20429507	20424133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ES.13348.10	chr16	-	2208	8	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	114.503185946229	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429499	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ES.13348.11	chr16	-	2143	6	NNC	ENSMUSG00000033809.16	novel	1215	8	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	159.764326431153	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20426635_20427491_20427837_20429292
ES.13348.12	chr16	-	2264	6	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	142.503894683619	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20426635_20427235_20427397_20427491_20427640_20429292
ES.13348.14	chr16	-	1184	8	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	148.770608244878	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427309_20427491_20427640_20429329
ES.13348.15	chr16	-	2866	4	NIC	ENSMUSG00000033809.16	novel	1215	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_1	119.752522589993	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20426635_20427491_20427640_20427736_20427837_20429292
ES.13348.16	chr16	-	1111	7	NNC	ENSMUSG00000033809.16	novel	1078	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	158.953260076316	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20429329
ES.13348.17	chr16	-	3208	4	NNC	ENSMUSG00000033809.16	novel	1215	8	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	131.044521696508	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429502	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424755_20425273_20427640_20427736_20427837_20429292
ES.13348.18	chr16	-	1322	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.348366823861	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429499	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427309_20427491_20427640_20427736_20427837_20429292
ES.13348.19	chr16	-	1309	8	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	136.842975705734	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429292
ES.13348.2	chr16	-	1932	8	NIC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	23	22	intron_retention	FALSE	canonical	3	261	junction_4	37.8282908923564	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGCTATGAAGTGCATC	NA	False	NA	1	True	CATAAA	-23	NA	20429458	20424178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20424468_20424611_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ES.13348.20	chr16	-	1372	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	132.226072977307	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429498	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429329
ES.13348.21	chr16	-	1970	4	NIC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	24	junction_2	120.281152121002	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429500	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20425716_20426513_20426635_20427491_20427640_20429292
ES.13348.23	chr16	-	1135	7	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	157.124154731219	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429485	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20429292
ES.13348.24	chr16	-	1329	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.348366823861	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429511	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424757_20425280_20425353_20425509_20425716_20426513_20426635_20427235_20427309_20427491_20427640_20427736_20427837_20429292
ES.13348.25	chr16	-	2166	8	NNC	ENSMUSG00000033809.16	novel	1215	8	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	154.035908880007	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429501	20424222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20426635_20427050_20427168_20427491_20427640_20427736_20427837_20429292
ES.13348.26	chr16	-	2984	5	NIC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	25	-1	intron_retention	FALSE	canonical	3	261	junction_1	26.0480325552622	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTGTGCAGCATACAT	NA	False	NA	-10	True	AATAAA	-13	NA	20429456	20424223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ES.13348.27	chr16	-	2763	3	NIC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	24	junction_1	14	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTTGTGCAGCATACA	NA	False	NA	-11	True	AATAAA	-12	NA	20429497	20424224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20426635_20427491_20427640_20429292
ES.13348.28	chr16	-	1271	8	NNC	ENSMUSG00000033809.16	novel	1239	8	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.378650313688	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTTGTGCAGCATACA	NA	False	NA	-11	True	AATAAA	-12	NA	20429498	20424224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425272_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429329
ES.13348.3	chr16	-	1265	8	NNC	ENSMUSG00000033809.16	novel	1215	8	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.403247114701	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTAGTGGTTGCTCG	NA	False	NA	8	True	AATAAA	-31	NA	20429498	20424205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20427736_20427837_20429292
ES.13348.4	chr16	-	3672	5	NNC	ENSMUSG00000033809.16	novel	1280	8	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	147.685476604844	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGTTAGTGGTTGCT	NA	False	NA	6	True	AATAAA	-29	NA	20429498	20424207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425274_20425353_20425509_20425716_20426513
ES.13348.5	chr16	-	1408	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	149.654602334843	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGTTAGTGGTTGCT	NA	False	NA	6	True	AATAAA	-29	NA	20429500	20424207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425274_20425348_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427665_20427736_20427837_20429329
ES.13348.6	chr16	-	1172	7	NNC	ENSMUSG00000033809.16	novel	1078	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	142.861724132891	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATAAAGTTAGTGGTTG	NA	False	NA	4	True	AATAAA	-27	NA	20429497	20424209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425099_20425228_20425509_20425716_20426513_20426635_20427491_20427640_20429329
ES.13348.7	chr16	-	1440	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.007868482327	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGCATACATAAAGTT	NA	False	NA	-4	True	AATAAA	-19	NA	20429499	20424217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424468_20424611_20424755_20425273_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427665_20427736_20427837_20429292
ES.13348.8	chr16	-	2253	6	NNC	ENSMUSG00000033809.16	novel	1308	8	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_1	149.3714832222	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGCAGCATACATAAAG	NA	False	NA	-6	True	AATAAA	-17	NA	20429497	20424219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20424755_20425273_20425353_20425509_20426635_20427235_20427397_20427491_20427640_20429292
ES.13348.9	chr16	-	3406	3	NNC	ENSMUSG00000033809.16	novel	1078	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	19.5	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGCAGCATACATAA	NA	False	NA	-8	True	AATAAA	-15	NA	20429497	20424221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20427312_20427491_20427640_20429329
ES.13349.1	chr16	+	994	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	140	0	2	multi-exon	FALSE	canonical	3	220	junction_2	23	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCTTCTAGGATTTT	5899	False	NA	22	True	AATACA	-32	NA	20430342	20437621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20430571_20436375_20436660_20437139
ES.13349.2	chr16	+	627	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	2	505	2	-363	multi-exon	FALSE	canonical	3	220	junction_2	23	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCAGTGGTTTTCATTT	5901	False	NA	NA	False	NA	NA	NA	20430344	20437256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20430571_20436375_20436660_20437139
ES.13349.3	chr16	+	1127	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	7	0	-1	0	multi-exon	FALSE	canonical	3	220	junction_2	23	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	5906	False	NA	12	True	NA	NA	NA	20430349	20437761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20430571_20436375_20436660_20437139
ES.13349.4	chr16	+	7261	1	NIC	ENSMUSG00000115219.3	novel	1134	3	NA	NA	-1	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCCCAGGTTTCTGGCT	5906	False	NA	11	True	AATACA	-21	NA	20430349	20437610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20430300_20437600
ES.13349.5	chr16	+	1701	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	46	-613	38	613	multi-exon	FALSE	canonical	3	220	junction_2	23	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAAATGTGCTGAG	5945	False	NA	NA	False	AGTAAA	-16	NA	20430388	20438374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20430571_20436375_20436660_20437139
ES.13349.6	chr16	+	262	1	Intergenic	novelGene_11197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9278	False	NA	NA	False	NA	NA	NA	20433721	20433983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20433700_20434000
ES.13349.7	chr16	+	151	1	Intergenic	novelGene_11198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAATAATAAATAAAT	9279	False	NA	NA	False	NA	NA	NA	20433722	20433873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20433700_20433900
ES.1335.1	chr1	+	2252	2	Antisense	novelGene_ENSMUSG00000054387.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	132940896	132943794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132942987_132943632
ES.13350.1	chr16	+	4152	15	NNC	ENSMUSG00000022842.19	novel	3445	13	NA	NA	-8914	0	intron_retention	FALSE	canonical	0	0	junction_12	12.5269098099952	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCCAGCTATTTCACT	NA	False	NA	NA	False	GATAAA	-18	NA	20439663	20465226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20439876_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462159_20462372_20462484_20462602_20462671_20462817
ES.13350.10	chr16	+	4380	19	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	7	3	intron_retention	FALSE	canonical	0	0	junction_5	13.4445592281601	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGCTATTTCACTTTT	NA	False	NA	NA	False	GATAAA	-21	NA	20448584	20465229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451420_20451497_20451645_20451799_20451866_20452968_20453041_20456410_20456600_20457409_20457553_20457958_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.100	chr16	+	4047	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	2673	junction_8	231.217648781474	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470451	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.101	chr16	+	2750	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	718.801345269483	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470451	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.103	chr16	+	2897	22	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	186252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	683.950728224962	4348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATATATATGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	20470451	20668416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812_20482132_20668397
ES.13350.107	chr16	+	3019	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	2673	junction_8	230.630918349242	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470451	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.109	chr16	+	2904	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	700.320489133368	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470451	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479170_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.11	chr16	+	4409	17	ISM	ENSMUSG00000022842.19	ENSMUST00000122306.8	2495	19	-5	-3	-5	3	intron_retention	FALSE	canonical	3	21	junction_7	6.73580683734324	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGCTATTTCACTTTT	NA	False	NA	NA	False	GATAAA	-21	NA	20448589	20465229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817
ES.13350.113	chr16	+	2923	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	700.450060675278	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470454	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473552_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.117	chr16	+	2897	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	700.450060675278	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470457	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473573_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.119	chr16	+	2913	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1109.1129563755	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCTGTCTATTTC	NA	False	NA	19	True	AATAAA	-12	NA	20470458	20482160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473797_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475732_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478855_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.12	chr16	+	3746	19	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.5604957388684	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGCTATTTCACTTTTT	NA	False	NA	NA	False	GATAAA	-22	NA	20448590	20465230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456605_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462237_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.120	chr16	+	2888	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	700.809132360588	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470458	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473797_20474022_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.121	chr16	+	3297	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	2673	junction_8	228.138073563836	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTCTGTCTATTTCC	NA	False	NA	20	True	AATAAA	-13	NA	20470464	20482161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20481491_20481812
ES.13350.122	chr16	+	2878	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	700.757697067967	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470466	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481828
ES.13350.123	chr16	+	4225	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	14	0	intron_retention	FALSE	canonical	3	2673	junction_8	231.292550176855	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470479	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.124	chr16	+	4675	9	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	3598	0	intron_retention	FALSE	canonical	3	2673	junction_2	240.417865392737	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20474063	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20474454_20474630_20474692_20475292_20476360_20476723_20478853_20479092_20479177_20480314_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.125	chr16	+	2573	14	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-3128	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_5	836.712784666082	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20474628	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20477497_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.126	chr16	+	3961	5	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-627	0	intron_retention	FALSE	canonical	3	2849	junction_4	133.60950564986	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20477129	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20478319_20478428_20478853_20479092_20480970_20481371_20481491_20481812
ES.13350.127	chr16	+	3459	5	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-69	0	intron_retention	FALSE	canonical	3	2849	junction_4	241.27512822502	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20477687	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20478319_20478428_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.128	chr16	+	1255	8	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1117.63587951697	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20478153	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20478319_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.129	chr16	+	5639	32	NIC	ENSMUSG00000045983.17	novel	5638	32	NA	NA	-246	12	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	349.567361563621	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGACCTATGGATCATC	NA	False	NA	29	True	ATTAAA	-29	NA	20486816	20511646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20487175_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.13	chr16	+	4417	16	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_8	13.1801197094547	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTCCAGCTATTTCA	NA	False	NA	NA	False	GATAAA	-16	NA	20448595	20465224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20456724_20456755_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462671_20462817
ES.13350.131	chr16	+	302	1	Intergenic	novelGene_11201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACAGATGTT	NA	False	NA	NA	False	NA	NA	NA	20488171	20488473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20488200_20488500
ES.13350.132	chr16	+	5482	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	299	junction_5	317.012396248159	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491439	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.133	chr16	+	5667	31	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-22	0	intron_retention	FALSE	canonical	3	67	junction_2	348.184778530021	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491450	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.134	chr16	+	5513	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-20	13	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACCTATGGATCATCT	NA	False	NA	30	True	ATTAAA	-30	NA	20491452	20511647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.135	chr16	+	5126	32	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-13	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	421.827035485879	2062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCAAGTGTCTCTCT	NA	False	NA	43	True	GGGGCT	-25	NA	20491459	20511376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502576_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.136	chr16	+	5451	32	FSM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	-39	-18	-13	15	multi-exon	FALSE	canonical	3	236	junction_1	320.871770382026	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTATGGATCATCTTT	NA	False	NA	32	True	ATTAAA	-32	NA	20491459	20511649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.137	chr16	+	5399	32	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_2	344.240701791684	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491459	20511634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.138	chr16	+	5502	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_20	369.121072564189	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491459	20511634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.14	chr16	+	3220	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	1	4	intron_retention	FALSE	canonical	3	19	junction_17	7.16005837868374	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448595	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463187_20463809
ES.13350.144	chr16	+	5402	32	FSM	ENSMUSG00000045983.17	ENSMUST00000115463.8	5378	32	-26	2	-3	0	multi-exon	FALSE	canonical	3	20	junction_19	401.228978300541	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491469	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503178_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.145	chr16	+	5271	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-3	-209	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTTGAAATTTGGT	NA	False	NA	89	True	NA	NA	NA	20491469	20511422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.146	chr16	+	5459	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_20	411.703544548441	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491469	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.147	chr16	+	5133	31	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-2	-195	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	349.844282820546	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTCTTTGCGGGG	NA	False	NA	103	True	TATAAA	-10	NA	20491470	20511436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.148	chr16	+	5454	33	NIC	ENSMUSG00000045983.17	novel	5378	32	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	348.969907146376	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491476	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503178_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.15	chr16	+	3844	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_8	10.1317492936807	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTCTCTTCCTTCAG	NA	False	NA	16	True	AATAAA	-16	NA	20448598	20464668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456605_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817
ES.13350.150	chr16	+	5322	31	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	349.844282820546	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491476	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.153	chr16	+	5443	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	349.404890268797	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491477	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506184_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.154	chr16	+	5465	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	345.77636830038	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491477	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505380_20505516_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.155	chr16	+	5459	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	339.67879473666	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491477	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500498_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.157	chr16	+	5395	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_26	411.399668813673	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491477	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505610_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.158	chr16	+	5423	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	398.998006196787	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491477	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.16	chr16	+	1338	8	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	0	1013	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	11.5192828574968	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTCAGGGTATCCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	20448600	20457720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409
ES.13350.161	chr16	+	8386	32	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	7	0	intron_retention	FALSE	canonical	3	839	junction_14	244.752460476844	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491479	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.164	chr16	+	5383	32	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	11	-4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_27	375.192567969187	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTATTGCCTCTT	NA	False	NA	10	True	ATTAAA	-10	NA	20491483	20511627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.166	chr16	+	5265	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	396.407231301468	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491483	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505610_20505970_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.167	chr16	+	7792	31	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	11	-1494	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	407.024782210289	2044	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCACCTCAGGGAAAC	NA	False	NA	NA	False	AAGAAA	-12	NA	20491483	20510137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500306_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505610_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.168	chr16	+	5392	32	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	393.883635631533	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491483	20511634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500306_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.169	chr16	+	5466	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	352.78437111074	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491483	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499560_20499649_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.17	chr16	+	3118	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	36	-2	13	2	multi-exon	FALSE	canonical	3	19	junction_18	7.37781124490401	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGTCTCTTCCTTCA	NA	False	NA	15	True	AATAAA	-15	NA	20448613	20464667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.171	chr16	+	5380	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	421.762932064547	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491484	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.172	chr16	+	5435	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	396.599667884476	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491484	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507830_20507941_20508083_20510996
ES.13350.173	chr16	+	5476	33	NNC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	375.188619230381	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491484	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.175	chr16	+	5375	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	347.317036759554	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491484	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504989_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.178	chr16	+	5232	30	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	383.342298056439	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491484	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.18	chr16	+	5447	39	Fusion	ENSMUSG00000006998.17_ENSMUSG00000022842.19	novel	2961	21	NA	NA	13	2	multi-exon	FALSE	canonical	0	0	junction_17	1513.30103945351	2191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCTATTTCCTGGGT	NA	False	NA	25	True	AATAAA	-18	NA	20448613	20482166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20469871_20469976_20470185_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.182	chr16	+	5429	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	424.657344881629	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491486	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493084_20494091_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.184	chr16	+	5456	33	NNC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	372.781624612101	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491486	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507376_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.188	chr16	+	5369	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	422.633271778444	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491492	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.189	chr16	+	5384	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_26	343.423549534682	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTATTGCCTCTTTA	NA	False	NA	12	True	ATTAAA	-12	NA	20491492	20511629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505970_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.19	chr16	+	3857	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	14	4	intron_retention	FALSE	canonical	0	0	junction_1	12.0608807203288	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448614	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20448990_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462895
ES.13350.192	chr16	+	5578	33	NNC	ENSMUSG00000045983.17	novel	5378	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	478.874327035549	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491495	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20495161_20495338_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.196	chr16	+	8275	31	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-1	0	intron_retention	FALSE	canonical	3	67	junction_2	364.367959623236	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491497	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.2	chr16	+	3712	19	NNC	ENSMUSG00000022842.19	novel	3445	13	NA	NA	-8860	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.088497300281	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTCACTTTTTTAAA	NA	False	NA	NA	False	GATAAA	-26	NA	20439717	20465234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20439929_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.20	chr16	+	3695	16	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	14	5	intron_retention	FALSE	canonical	2	6	junction_2	9.0455636763124	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTTCCTTCAGTT	NA	False	NA	18	True	AATAAA	-18	NA	20448614	20464670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817
ES.13350.200	chr16	+	5372	34	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_24	344.692615357113	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491497	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20504924_20505005_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.207	chr16	+	5305	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	344.039172404012	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491499	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505610_20505970_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.21	chr16	+	4206	18	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	14	1	intron_retention	FALSE	non_canonical	0	0	junction_1	14.9943472624516	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAGCTATTTCACTT	NA	False	NA	NA	False	GATAAA	-19	NA	20448614	20465227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448682_20448740_20448798_20449101_20449189_20449846_20450063_20451303_20451407_20451497_20451645_20451799_20451866_20452968_20453041_20456410_20456600_20457409_20457553_20457958_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817
ES.13350.210	chr16	+	5340	34	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	418.423792531097	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491499	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497694_20497962_20498529_20498633_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.211	chr16	+	5347	34	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	346.952279568128	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491500	20511634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498529_20498633_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.213	chr16	+	6386	31	NIC	ENSMUSG00000045983.17	novel	5638	32	NA	NA	2	0	intron_retention	FALSE	canonical	3	471	junction_12	280.994505679777	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491500	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.214	chr16	+	5470	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	352.564409840156	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491500	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493084_20494091_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.216	chr16	+	5373	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	466.163371879428	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTTTATTGCCTCTTT	NA	False	NA	11	True	ATTAAA	-11	NA	20491502	20511628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500057_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.219	chr16	+	6865	32	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	-1494	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	244.752460476844	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCACCTCAGGGAAAC	NA	False	NA	NA	False	AAGAAA	-12	NA	20491504	20510137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.221	chr16	+	5088	32	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	1	-262	combination_of_known_splicesites	FALSE	canonical	3	67	junction_2	344.240701791684	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGATGCTGCCAAGTG	NA	False	NA	36	True	GGGGCT	-18	NA	20491505	20511369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.223	chr16	+	5259	31	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_3	427.221702788299	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491506	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.224	chr16	+	5657	32	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	2	0	intron_retention	FALSE	canonical	3	839	junction_13	248.070229390141	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491506	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.228	chr16	+	5431	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	398.200620761696	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491509	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493084_20494091_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.229	chr16	+	8208	30	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	5	0	intron_retention	FALSE	canonical	3	36	junction_1	371.148312881223	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491509	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.23	chr16	+	3611	17	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	15	4	intron_retention	FALSE	canonical	2	6	junction_2	9.06551673927085	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448615	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.231	chr16	+	5319	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	392.626253579661	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491511	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504989_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.232	chr16	+	5429	33	NNC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	371.003073132067	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491512	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492410_20492634_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.233	chr16	+	5387	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	402.782639047934	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491515	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505139_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.234	chr16	+	5473	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	344.362498355203	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491515	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507902_20508083_20510996
ES.13350.235	chr16	+	5716	29	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-3	0	intron_retention	FALSE	canonical	3	236	junction_1	351.114268567708	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491516	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506213_20507288_20507616_20507720_20508083_20510996
ES.13350.238	chr16	+	5562	34	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	419.405852431959	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTTACTGACCTAT	NA	False	NA	21	True	ATTAAA	-21	NA	20491517	20511638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20493213_20493337_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.244	chr16	+	5423	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.463314810636	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491519	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491621_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.246	chr16	+	5199	30	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	451.000441613215	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491520	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.247	chr16	+	5315	32	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	484.190984498166	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491520	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500665_20500797_20500990_20501408_20501556_20502167_20502405_20502561_20502661_20502773_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.248	chr16	+	5401	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	339.67879473666	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCTCTTTACTG	NA	False	NA	15	True	ATTAAA	-15	NA	20491520	20511632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500297_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.249	chr16	+	8263	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	-1	intron_retention	FALSE	canonical	3	23	junction_24	362.457707662218	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491520	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20504924_20505005_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.25	chr16	+	4022	16	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	27	5	intron_retention	FALSE	canonical	3	20	junction_15	7.12242156073964	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTTCCTTCAGTT	NA	False	NA	18	True	AATAAA	-18	NA	20448627	20464670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462671_20462817_20463009_20463090
ES.13350.250	chr16	+	5426	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	347.317036759554	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491520	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504710_20504906_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.252	chr16	+	6788	31	ISM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	26	1494	4	-1494	5prime_fragment	FALSE	canonical	3	236	junction_1	315.553075303242	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCACCTCAGGGAAAC	NA	False	NA	NA	False	AAGAAA	-12	NA	20491524	20510137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.253	chr16	+	5311	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	373.730414171214	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491524	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492676_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.255	chr16	+	8086	32	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	5	-255	intron_retention	FALSE	canonical	3	471	junction_14	278.270562085185	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCAAGTGTCTCTCT	NA	False	NA	43	True	GGGGCT	-25	NA	20491525	20511376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.256	chr16	+	5301	31	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.060804269359	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491525	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492954_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.258	chr16	+	5417	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	375.170705937644	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491528	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499468_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.26	chr16	+	3891	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	48	0	intron_retention	FALSE	canonical	3	19	junction_17	7.52205522971566	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTGTCTCTTCCTT	NA	False	NA	13	True	AATAAA	-13	NA	20448648	20464665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.260	chr16	+	5451	33	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	371.769832818304	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491529	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492320_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.261	chr16	+	5411	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	476.981717253135	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTATTGCCTCTT	NA	False	NA	10	True	ATTAAA	-10	NA	20491530	20511627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492346_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502671_20502778_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504903_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.262	chr16	+	5014	29	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	436.314789645349	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491538	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.263	chr16	+	5058	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	18	-263	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	401.628195070967	2062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGGATGCTGCCAAGT	NA	False	NA	35	True	GGGGCT	-17	NA	20491538	20511368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.265	chr16	+	5093	32	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	19	-263	combination_of_known_junctions	FALSE	canonical	3	236	junction_1	347.040851712798	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGGATGCTGCCAAGT	NA	False	NA	35	True	GGGGCT	-17	NA	20491539	20511368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.267	chr16	+	5316	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	404.831705375727	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491539	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499501_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.27	chr16	+	3512	17	NNC	ENSMUSG00000022842.19	novel	3042	18	NA	NA	136	4	intron_retention	TRUE	canonical	0	0	junction_1	13.8451254960004	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448736	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456120_20456230_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.270	chr16	+	5364	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	396.708533775152	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491539	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507812_20507941_20508083_20510996
ES.13350.271	chr16	+	5767	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	21	-1495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	342.505917775062	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAGCACCTCAGGGAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	20491541	20510136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508406_20509465
ES.13350.272	chr16	+	5446	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	421.138407882432	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491546	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499417_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.273	chr16	+	5404	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	373.611527339672	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491548	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492560_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.274	chr16	+	5374	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	436.968649431441	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491553	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506022_20506130_20506213_20507309_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.277	chr16	+	5336	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	485.895577224882	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491555	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499468_20499554_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.278	chr16	+	5160	30	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	439.775499423268	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTATTGCCTCTTTA	NA	False	NA	12	True	ATTAAA	-12	NA	20491555	20511629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.279	chr16	+	4453	27	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	347.141098557478	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491556	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504671_20507558_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.28	chr16	+	2933	17	NNC	ENSMUSG00000022842.19	novel	3042	18	NA	NA	137	4	intron_retention	FALSE	canonical	0	0	junction_1	12.9818081849178	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448737	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20452968_20453041_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463187_20463809
ES.13350.281	chr16	+	5069	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-12	-296	combination_of_known_junctions	FALSE	canonical	3	299	junction_5	342.282755006734	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGATGGCTTGGGGCTGCC	NA	False	NA	2	True	AATAAA	-14	NA	20491557	20511335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.282	chr16	+	5380	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	352.575606918218	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491557	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502654_20502769_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.283	chr16	+	7056	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_10	428.149569788762	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491557	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20492406_20492617_20492712_20492977_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499937_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20504924_20505005_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.284	chr16	+	5552	34	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	436.869675014939	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491557	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20493178_20493337_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.285	chr16	+	5437	31	NIC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-11	0	intron_retention	FALSE	canonical	3	236	junction_1	325.534780527877	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491558	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.287	chr16	+	4977	32	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-11	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	347.357507898482	2027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTGCCCATCTGTCT	NA	False	NA	NA	False	GATAAA	-18	NA	20491558	20508345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492670_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.29	chr16	+	4640	15	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	154	3	intron_retention	FALSE	canonical	3	21	junction_7	6.66738941660475	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTCTCTTCCTTCAG	NA	False	NA	16	True	AATAAA	-16	NA	20448754	20464668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602
ES.13350.290	chr16	+	10063	26	NIC	ENSMUSG00000045983.17	novel	5378	32	NA	NA	-10	0	intron_retention	FALSE	canonical	3	839	junction_12	238.102834926424	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491559	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20503259_20504260_20504706_20504900_20505382_20505509_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.293	chr16	+	5379	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	352.05208687778	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491560	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492987_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.295	chr16	+	5316	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	466.179182479118	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491564	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492981_20493065_20494101_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.297	chr16	+	4675	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	403.93466724289	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491565	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20498616_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.3	chr16	+	3678	18	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-93	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	9.1079644982311	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGCTATTTCACTTT	NA	False	NA	NA	False	GATAAA	-20	NA	20448484	20465228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.30	chr16	+	2966	19	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.0708907007361	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTGTCTCTTCCTT	NA	False	NA	13	True	AATAAA	-13	NA	20448754	20464665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449192_20449542_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.301	chr16	+	5137	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	0	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	424.728898047482	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTCTTTGCGGGG	NA	False	NA	103	True	TATAAA	-10	NA	20491569	20511436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.303	chr16	+	5375	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	432.769766617814	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491570	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507830_20507941_20508083_20510996
ES.13350.305	chr16	+	5285	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_4	459.068304979593	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491570	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504906_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.306	chr16	+	5363	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	374.841336226076	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	NA	False	NA	13	True	ATTAAA	-13	NA	20491571	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499810_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.31	chr16	+	2921	19	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	155	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	11.6821326059167	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCTTCCTTCAGTT	NA	False	NA	18	True	AATAAA	-18	NA	20448755	20464670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20452968_20453041_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.310	chr16	+	5354	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	351.473633212721	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATTAAGTTTATTGCCT	NA	False	NA	7	True	ATTAAA	-7	NA	20491574	20511624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497976_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.313	chr16	+	5275	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	404.883629431833	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491587	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494550_20496437_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.314	chr16	+	6079	32	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	22	0	intron_retention	FALSE	canonical	3	839	junction_13	250.523705367561	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491594	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.315	chr16	+	2681	18	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	314.758819077165	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491595	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501474_20511600
ES.13350.316	chr16	+	5285	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	404.414300091659	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491595	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504622_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.318	chr16	+	5306	32	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	470.121699212831	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491596	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499637_20499827_20499932_20500067_20500169_20500329_20500486_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.32	chr16	+	4158	18	ISM	ENSMUSG00000022842.19	ENSMUST00000122306.8	2495	19	161	0	155	0	intron_retention	FALSE	canonical	3	20	junction_17	7.06715194956219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCCAGCTATTTCACT	NA	False	NA	NA	False	GATAAA	-18	NA	20448755	20465226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.320	chr16	+	5385	33	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	417.77608760555	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491598	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20491627_20492320_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.324	chr16	+	5942	31	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	68	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	371.022792052216	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20491640	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.325	chr16	+	6448	31	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	-206	0	intron_retention	FALSE	canonical	3	471	junction_13	285.741221309694	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491838	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.326	chr16	+	5732	32	NNC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	-74	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	424.963978396338	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTATGGATCATCTTTC	NA	False	NA	33	True	ATTAAA	-33	NA	20491970	20511650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500679_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.33	chr16	+	8973	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	249	-5	intron_retention	FALSE	canonical	0	0	junction_7	12.3350048135378	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATGACTCCAGCTATT	NA	False	NA	NA	False	GATAAA	-13	NA	20448849	20465221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20456600_20456724_20456790_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.332	chr16	+	4950	31	NIC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	80	-72	combination_of_known_junctions	FALSE	canonical	3	839	junction_13	242.517099053517	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACCATGTGCCCATCTG	NA	False	NA	NA	False	GATAAA	-15	NA	20492346	20508342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.336	chr16	+	5395	33	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	114	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	475.125393605138	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20492677	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20504924_20505005_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20506467_20506737_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.337	chr16	+	3327	22	NNC	ENSMUSG00000045983.17	novel	5507	32	NA	NA	114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	386.414713831862	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20492677	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20492712_20492977_20493065_20494093_20494157_20500498_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.34	chr16	+	3698	10	NIC	ENSMUSG00000022842.19	novel	3445	13	NA	NA	184	-1	intron_retention	FALSE	canonical	3	20	junction_9	5.59320575495699	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTCCAGCTATTTCAC	NA	False	NA	NA	False	GATAAA	-17	NA	20451803	20465225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462671_20462817_20463009_20463090
ES.13350.340	chr16	+	5419	28	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	1919	2488	1325	729	internal_fragment	FALSE	canonical	3	839	junction_10	241.590721712483	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTACCTAAAACATAAGTA	NA	False	NA	NA	False	NA	NA	NA	20494185	20509143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.342	chr16	+	4914	28	ISM	ENSMUSG00000045983.17	ENSMUST00000115461.8	5507	32	2307	2	1616	0	3prime_fragment	FALSE	canonical	3	471	junction_9	289.100696332657	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20494476	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.345	chr16	+	3675	19	NNC	ENSMUSG00000045983.17	novel	5378	32	NA	NA	189	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	415.358345956303	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20497344	20511633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502632_20505893_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.348	chr16	+	4259	25	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	1160	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	491.251404790188	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20498315	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20508246_20508321_20510996
ES.13350.35	chr16	+	172	1	Intergenic	novelGene_11199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	20459850	20460022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20459800_20460000
ES.13350.350	chr16	+	3764	24	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	-1062	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	413.425242337584	2067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTATTGCCTCTT	NA	False	NA	10	True	ATTAAA	-10	NA	20498726	20511627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505905_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.353	chr16	+	3724	23	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	-314	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	493.154368737578	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	576	False	NA	14	True	ATTAAA	-14	NA	20499474	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504600_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.354	chr16	+	3638	22	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	2612	0	-151	0	3prime_fragment	FALSE	canonical	3	471	junction_3	305.135098884787	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	739	False	NA	14	True	ATTAAA	-14	NA	20499637	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.356	chr16	+	3449	21	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	7663	0	141	0	3prime_fragment	FALSE	canonical	3	839	junction_2	251.764552707485	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	1031	False	NA	14	True	ATTAAA	-14	NA	20499929	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.358	chr16	+	3287	20	NNC	ENSMUSG00000045983.17	novel	5394	32	NA	NA	381	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	416.174092593785	2066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	1271	False	NA	14	True	ATTAAA	-14	NA	20500169	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508058_20510996
ES.13350.36	chr16	+	1341	6	NNC	ENSMUSG00000022842.19	novel	719	5	NA	NA	4262	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.7782437197199	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTGTCTCTTCCTT	NA	False	NA	13	True	AATAAA	-13	NA	20462217	20464665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20462237_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.360	chr16	+	3129	19	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	741	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	516.135775633591	2066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTATTGCCTCTTTA	1631	False	NA	12	True	ATTAAA	-12	NA	20500529	20511629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504906_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507830_20507941_20508083_20510996
ES.13350.361	chr16	+	5294	14	NIC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	1000	-1524	intron_retention	FALSE	canonical	3	1201	junction_1	158.885318323306	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTAAAAAAAAAGAAAA	1890	False	NA	NA	False	NA	NA	NA	20500788	20510107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20500990_20501408_20502405_20502561_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.362	chr16	+	2597	16	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	425.853621173598	2066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	3282	False	NA	14	True	ATTAAA	-14	NA	20502180	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505671_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.363	chr16	+	3965	15	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	-307	-1494	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_6	426.760794251539	2043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCACCTCAGGGAAAC	3340	False	NA	NA	False	AAGAAA	-12	NA	20502238	20510137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504906_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.365	chr16	+	2387	15	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	5534	0	14	0	3prime_fragment	FALSE	canonical	3	1443	junction_1	131.755726359697	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	3661	False	NA	14	True	ATTAAA	-14	NA	20502559	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.366	chr16	+	1640	11	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	494.876307778014	2066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	3694	False	NA	14	True	ATTAAA	-14	NA	20502592	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20511253
ES.13350.367	chr16	+	5089	13	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	43	0	intron_retention	FALSE	canonical	3	41	junction_1	462.488941309231	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	3984	False	NA	14	True	ATTAAA	-14	NA	20502882	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.368	chr16	+	3888	13	NNC	ENSMUSG00000045983.17	novel	5004	26	NA	NA	401	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	626.150069649619	2066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTATTGCCTCTTTAC	4342	False	NA	13	True	ATTAAA	-13	NA	20503240	20511630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505512_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508407_20509465
ES.13350.369	chr16	+	1821	10	ISM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	7873	0	2059	0	3prime_fragment	FALSE	canonical	3	1581	junction_1	104.232645771104	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	6000	False	NA	14	True	ATTAAA	-14	NA	20504898	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ES.13350.37	chr16	+	3816	22	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-1023	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	683.749092037187	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20469378	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20469976_20470141_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.370	chr16	+	4005	4	ISM	ENSMUSG00000045983.17	ENSMUST00000231598.2	492	6	4448	-3601	-440	-2	3prime_fragment	FALSE	canonical	3	1598	junction_1	100.692049779955	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTATTGCCTCTTTA	8389	False	NA	12	True	ATTAAA	-12	NA	20507287	20511629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20507388_20507480_20507616_20507720_20507803_20507941
ES.13350.371	chr16	+	3825	1	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	79	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2064	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	8908	False	NA	14	True	ATTAAA	-14	NA	20507806	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20507800_20511600
ES.13350.372	chr16	+	818	2	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	1344	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20509071	20511631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20509255_20510996
ES.13350.373	chr16	+	2401	7	FSM	ENSMUSG00000050821.15	ENSMUST00000232207.2	962	7	33	-1472	4	-8	multi-exon	FALSE	canonical	0	0	junction_3	0.687184270936277	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTCTATATACATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	20512033	20521786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20512223_20513517_20513580_20514488_20514632_20517671_20517766_20518017_20518201_20518378_20518496_20520173
ES.13350.374	chr16	+	1823	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	-868	-5	-868	5	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCATTGCGGGTT	36	False	NA	20	True	ATTAAA	-21	NA	20535546	20541022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ES.13350.375	chr16	+	2039	5	NNC	ENSMUSG00000021018.9	novel	950	5	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	353.561168682309	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	1010	False	NA	14	True	ATTAAA	-15	NA	20536520	20541016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20539463
ES.13350.376	chr16	+	3158	4	NNC	ENSMUSG00000021018.9	novel	950	5	NA	NA	-36	-1	intron_retention	FALSE	canonical	0	0	junction_3	360.607820214704	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	1033	False	NA	14	True	ATTAAA	-15	NA	20536543	20541016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20536745_20537573_20537658_20537740_20538405_20538807
ES.13350.377	chr16	+	3553	3	ISM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	135	3	-30	0	intron_retention	FALSE	canonical	3	669	junction_2	82.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCTCCATTGTCAT	1039	False	NA	12	True	ATTAAA	-13	NA	20536549	20541014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20536745_20537573_20537658_20537740
ES.13350.378	chr16	+	895	4	NIC	ENSMUSG00000021018.9	novel	950	5	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	628	junction_3	112.652859114479	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	1041	False	NA	14	True	ATTAAA	-15	NA	20536551	20541016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20536745_20537573_20537835_20539268_20539353_20540659
ES.13350.379	chr16	+	1968	1	NIC	ENSMUSG00000021018.9	novel	950	5	NA	NA	-21	-2231	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAGACAACTAGACCT	1048	False	NA	NA	False	NA	NA	NA	20536558	20538526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20536600_20538500
ES.13350.380	chr16	+	3626	2	ISM	ENSMUSG00000021018.9	ENSMUST00000231656.2	689	4	-18	-1	-18	-1	intron_retention	FALSE	canonical	3	834	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTCCATTGTCATTG	1051	False	NA	14	True	ATTAAA	-15	NA	20536561	20541016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20536745_20537573
ES.13350.382	chr16	+	4152	1	Genic_Genomic	ENSMUSG00000021018.9	novel	NA	NA	NA	NA	14	4	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCATTGTCATTGCGGGT	1359	False	NA	19	True	ATTAAA	-20	NA	20536869	20541021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_20536900_20541000
ES.13350.383	chr16	+	1897	2	ISM	ENSMUSG00000021018.9	ENSMUST00000231392.2	678	5	832	-4	766	1	intron_retention	FALSE	canonical	3	890	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCCATTGTCATTGCG	82	False	NA	16	True	ATTAAA	-17	NA	20537687	20541018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20537835_20539268
ES.13350.384	chr16	+	4268	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	-995	2	-995	0	multi-exon	TRUE	canonical	1	3	junction_1	2.73332661424962	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTTGAGGTAGGCTC	2227	False	NA	NA	False	ATTAAA	-18	NA	20550881	20561132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.387	chr16	+	3544	22	NNC	ENSMUSG00000006958.15	novel	3275	23	NA	NA	-343	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.23879544250132	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTTTGAGGTAGGC	2879	False	NA	NA	False	ATTAAA	-16	NA	20551533	20561130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553346_20553857_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.388	chr16	+	3806	22	NIC	ENSMUSG00000006958.15	novel	3275	23	NA	NA	-304	-6	intron_retention	FALSE	canonical	2	3	junction_14	2.53769763704271	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTTTGGGTTTGAGGT	2918	False	NA	NA	False	ATTAAA	-12	NA	20551572	20561126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.389	chr16	+	3876	23	NIC	ENSMUSG00000006958.15	novel	3076	23	NA	NA	-260	0	intron_retention	FALSE	canonical	0	0	junction_5	3.35994883865024	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTTTGAGGTAGGCTC	2962	False	NA	NA	False	ATTAAA	-18	NA	20551616	20561132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553611_20553720_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.390	chr16	+	3528	23	FSM	ENSMUSG00000006958.15	ENSMUST00000232646.2	3076	23	-193	-259	-191	-2	multi-exon	FALSE	canonical	0	0	junction_1	3.04952238503991	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTTTGAGGTAGGC	3031	False	NA	NA	False	ATTAAA	-16	NA	20551685	20561130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20552046_20552214_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.391	chr16	+	3171	22	NNC	ENSMUSG00000006958.15	novel	3275	23	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.28950781698487	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGGGTTTGAGGTAG	3213	False	NA	NA	False	ATTAAA	-14	NA	20551867	20561128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20552046_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559942_20560095_20560245_20560346_20560674
ES.13350.392	chr16	+	3123	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	7	145	5	118	multi-exon	FALSE	canonical	1	3	junction_1	2.73332661424962	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCACTGGCTTATTGGGA	3229	False	NA	NA	False	NA	NA	NA	20551883	20560989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.393	chr16	+	3673	22	NNC	ENSMUSG00000006958.15	novel	3275	23	NA	NA	-30	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	3.71794691351298	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTTTGAGGTAGGC	3499	False	NA	NA	False	ATTAAA	-16	NA	20552153	20561130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553655_20553720_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555650_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ES.13350.394	chr16	+	181	1	Intergenic	novelGene_11202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTACTGACGTG	NA	False	NA	NA	False	NA	NA	NA	20566976	20567157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20567000_20567200
ES.13350.395	chr16	+	169	1	Intergenic	novelGene_11205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	20627074	20627243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20627100_20627200
ES.13350.396	chr16	+	3345	2	Genic_Genomic	ENSMUSG00000116721.2	novel	323	1	NA	NA	-3150	175	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTAGTCTTGAAGT	5985	False	NA	NA	False	NA	NA	NA	20635980	20639628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_20636972_20637274
ES.13350.4	chr16	+	3909	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-11	4	intron_retention	FALSE	canonical	1	2	junction_14	9.63392443399885	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448566	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462237_20462372_20462484_20462602_20462671_20462817
ES.13350.41	chr16	+	3814	18	NIC	ENSMUSG00000006998.17	novel	3001	21	NA	NA	11	0	intron_retention	FALSE	canonical	3	2673	junction_7	195.736600075194	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470412	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476812_20478155_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.42	chr16	+	2941	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	699.9421690397	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470412	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478162_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.44	chr16	+	2805	20	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	718.590201795393	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470416	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471483_20473559_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.48	chr16	+	3111	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	24	0	intron_retention	FALSE	canonical	3	2673	junction_8	228.058868815552	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470425	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.5	chr16	+	3722	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	-9	-561	-9	0	multi-exon	FALSE	canonical	3	19	junction_18	7.37781124490401	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCCAGCTATTTCACT	NA	False	NA	NA	False	GATAAA	-18	NA	20448568	20465226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ES.13350.50	chr16	+	4835	17	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-23	0	intron_retention	FALSE	canonical	3	2673	junction_8	240.479176593318	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470430	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20476360_20476723_20476812_20478155_20478319_20478428_20478853_20479092_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.56	chr16	+	3208	20	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-20	-6	intron_retention	FALSE	canonical	0	0	junction_15	718.506372415872	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAAGGTCTCTGTCTA	NA	False	NA	15	True	AATAAA	-8	NA	20470433	20482156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480174_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.57	chr16	+	2913	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	700.757697067967	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470434	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481482_20481816
ES.13350.59	chr16	+	3289	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-18	0	intron_retention	FALSE	canonical	3	2673	junction_8	224.064271547102	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470435	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.6	chr16	+	4660	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_9	12.0932251178087	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTCCAGCTATTTCA	NA	False	NA	NA	False	GATAAA	-16	NA	20448571	20465224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20456724_20456790_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462484_20462602_20462671_20462817
ES.13350.60	chr16	+	4633	19	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-18	0	intron_retention	FALSE	canonical	3	2673	junction_8	230.203164429988	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470435	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.61	chr16	+	2917	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	695.837042704684	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470435	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480488_20480577_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.64	chr16	+	2919	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	697.964117988883	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470435	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471043_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.66	chr16	+	2289	18	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	756.687293999082	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCTGTCTATTTC	NA	False	NA	19	True	AATAAA	-12	NA	20470439	20482160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471024_20474093_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.7	chr16	+	3779	18	ISM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	0	-4	0	4	intron_retention	FALSE	canonical	3	20	junction_17	7.06715194956219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCTTCCTTCAGT	NA	False	NA	17	True	AATAAA	-17	NA	20448577	20464669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ES.13350.70	chr16	+	2914	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	682.783367914011	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470440	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470999_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.72	chr16	+	2943	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	700.838631569351	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470440	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474287_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.77	chr16	+	3216	19	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	intron_retention	FALSE	canonical	3	2673	junction_6	227.132806367541	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470441	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473793_20474002_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.78	chr16	+	4810	7	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1200.72941951503	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470441	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471030_20476540_20478319_20478428_20478531_20478706_20480970_20481371_20481491_20481812
ES.13350.79	chr16	+	5031	18	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	intron_retention	FALSE	canonical	3	2673	junction_8	233.93795942115	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470441	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20481491_20481812
ES.13350.8	chr16	+	4304	16	NIC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_14	10.1047843453815	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTCCAGCTATTTCA	NA	False	NA	NA	False	GATAAA	-16	NA	20448578	20465224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462602_20462671_20462817
ES.13350.82	chr16	+	1826	12	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_11	870.724757489866	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470441	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20481812
ES.13350.84	chr16	+	3068	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	intron_retention	FALSE	canonical	3	2673	junction_7	229.047515906495	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470441	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.85	chr16	+	3752	18	NNC	ENSMUSG00000006998.17	novel	3001	21	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1	junction_12	733.369981258958	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470441	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20471508_20473297_20473420_20473567_20473793_20474002_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478855_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.86	chr16	+	2840	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	699.9421690397	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470441	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478236_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.88	chr16	+	4003	20	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-9	0	intron_retention	TRUE	canonical	0	0	junction_6	963.985994312115	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470444	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474270_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20477497_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.89	chr16	+	3200	19	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	2673	junction_8	233.757233993826	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCTGTCTATTTC	NA	False	NA	19	True	AATAAA	-12	NA	20470444	20482160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.9	chr16	+	3314	17	NNC	ENSMUSG00000022842.19	novel	3152	19	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_7	10.087120500916	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCAGCCTGTCTCTTCC	NA	False	NA	11	True	AATAAA	-11	NA	20448582	20464663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451645_20451799_20451866_20456410_20456596_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463187_20463809
ES.13350.91	chr16	+	3009	21	FSM	ENSMUSG00000006998.17	ENSMUST00000172207.8	3001	21	-8	0	-8	0	multi-exon	FALSE	canonical	3	6	junction_1	681.526116520857	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470445	20482164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20470602_20470901_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.92	chr16	+	2910	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	697.25885437189	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCTGTCTATTTC	NA	False	NA	19	True	AATAAA	-12	NA	20470446	20482160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478535_20478712_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.98	chr16	+	2898	21	NNC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	695.837042704684	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTCTGTCTATTTCC	NA	False	NA	20	True	AATAAA	-13	NA	20470451	20482161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480474_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13350.99	chr16	+	3087	20	NIC	ENSMUSG00000006998.17	novel	2961	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	2673	junction_8	231.301712043945	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTGTCTATTTCCT	NA	False	NA	21	True	AATAAA	-14	NA	20470451	20482162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ES.13351.1	chr16	-	1434	2	FSM	ENSMUSG00000051146.4	ENSMUST00000052939.4	1291	2	-149	6	-149	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTCTGCTGC	NA	False	NA	-6	True	AATAAA	-19	NA	20440186	20437970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20438994_20439775
ES.13352.1	chr16	-	2708	1	Antisense	novelGene_ENSMUSG00000115293.3_AS_novelGene_ENSMUSG00000022842.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAATTCTAAGTTAGAC	NA	False	NA	NA	False	NA	NA	NA	20456810	20454102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_20454100_20456800
ES.13353.1	chr16	-	175	1	Intergenic	novelGene_11200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGAGAGTGGGGTC	NA	False	NA	NA	False	NA	NA	NA	20486880	20486705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20486700_20486900
ES.13354.1	chr16	-	4475	17	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-11	-1	intron_retention	TRUE	canonical	3	33	junction_14	57.6508889784017	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGCTGTTGGCTCATA	NA	False	NA	0	True	AATAAA	-38	NA	20534878	20521714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20532210_20532362_20532520_20534658
ES.13354.10	chr16	-	4697	17	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-13	-4	intron_retention	FALSE	canonical	3	33	junction_10	58.2421869760228	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534880	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.100	chr16	-	4328	18	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	23	-18	intron_retention	FALSE	canonical	3	164	junction_12	31.2004347410045	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534891	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.101	chr16	-	3006	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	11	-18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	71.048348106026	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534903	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.103	chr16	-	4772	15	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	-15	-18	intron_retention	FALSE	canonical	3	164	junction_12	36.263280466666	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534882	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20532210_20532362_20532520_20534658
ES.13354.104	chr16	-	3112	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-15	-18	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_21	58.9803401931573	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534882	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532056_20532210_20532362_20532520_20534658
ES.13354.105	chr16	-	2970	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	10	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	60.7278163188684	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534851	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532167_20532210_20532362_20532520_20534658
ES.13354.106	chr16	-	4700	16	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-17	-18	intron_retention	FALSE	canonical	3	33	junction_10	60.4911012739339	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534884	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.107	chr16	-	2512	16	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	49	-18	intron_retention	FALSE	canonical	2	2	junction_12	70.0399885779545	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20531089	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530483_20530542_20530641_20530727_20530806_20530933_20531061
ES.13354.109	chr16	-	5246	12	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	0	-18	intron_retention	FALSE	canonical	3	214	junction_8	23.1491748777502	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534914	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.11	chr16	-	4069	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	164	junction_14	30.8992644400524	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534921	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.110	chr16	-	2908	14	NNC	ENSMUSG00000022843.18	novel	2730	23	NA	NA	19	-18	intron_retention	FALSE	canonical	0	0	junction_12	70.9654470468285	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534842	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530484_20532471_20532520_20534658
ES.13354.111	chr16	-	5353	12	NNC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	21	-18	intron_retention	FALSE	canonical	3	33	junction_9	68.7936187699926	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534893	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20532210_20532362_20532520_20534658
ES.13354.112	chr16	-	3008	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	62.0613532743843	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534907	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20532056_20532210_20532362_20532520_20534658
ES.13354.113	chr16	-	3851	21	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	20	-18	intron_retention	FALSE	canonical	2	3	junction_8	62.1815688126313	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534894	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528066_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.114	chr16	-	3988	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-18	intron_retention	FALSE	canonical	3	164	junction_13	31.1542494311407	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534912	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.115	chr16	-	3428	22	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	20	-18	intron_retention	FALSE	canonical	2	4	junction_8	60.7550003541043	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534894	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528021_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.116	chr16	-	2790	23	NIC	ENSMUSG00000022843.18	novel	3944	24	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	59.2431779383197	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTGTGACATTCCCA	NA	False	NA	NA	False	NA	NA	NA	20534912	20524288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20524467_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.117	chr16	-	3764	1	NIC	ENSMUSG00000022843.18	novel	3944	24	NA	NA	-181	-271	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTACTCACTACCGAC	NA	False	NA	NA	False	AAGAAA	-27	NA	20535095	20531331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20531300_20535100
ES.13354.12	chr16	-	3077	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	3	junction_21	71.8963098154513	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534919	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531538_20531629_20531759_20532077_20532210_20534658
ES.13354.13	chr16	-	4634	16	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	159	junction_7	39.0733782630692	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534885	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.14	chr16	-	3438	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	-4	intron_retention	FALSE	canonical	3	33	junction_16	54.027177886812	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534893	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.15	chr16	-	3388	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	159	junction_9	38.6317644321418	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534921	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.16	chr16	-	3014	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_12	61.0720344219001	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534913	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.17	chr16	-	2925	18	NNC	ENSMUSG00000022843.18	novel	2730	23	NA	NA	-285	-4	intron_retention	FALSE	canonical	3	33	junction_15	57.826311943104	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20531423	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403
ES.13354.18	chr16	-	3174	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	121	-4	intron_retention	FALSE	canonical	1	3	junction_21	61.1102865332949	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534740	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20534658
ES.13354.2	chr16	-	3629	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	-503	2	-456	-2	multi-exon	FALSE	canonical	3	159	junction_10	37.9003269459341	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGCTGTTGGCTCAT	NA	False	NA	-1	True	AATAAA	-45	NA	20535370	20521715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.20	chr16	-	3962	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	28	-4	intron_retention	FALSE	canonical	3	159	junction_9	37.9772493493676	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534833	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20532210_20532362_20532520_20534658
ES.13354.21	chr16	-	4175	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	164	junction_13	31.2410873717002	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534921	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.22	chr16	-	4963	15	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	164	junction_11	33.7113346166041	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534919	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.23	chr16	-	2825	18	ISM	ENSMUSG00000022843.18	ENSMUST00000153075.8	3511	22	3418	-29	-358	-5	3prime_fragment	FALSE	canonical	3	159	junction_8	41.8421816602572	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTGTGCTGTTGGCT	NA	False	NA	-4	True	AATAAA	-42	NA	20531496	20521718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403
ES.13354.24	chr16	-	3510	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	3	-6	intron_retention	FALSE	canonical	1	2	junction_9	60.6732884709927	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534911	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527826_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.25	chr16	-	2931	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	69.1690497116776	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534936	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.26	chr16	-	3293	21	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-17	-6	intron_retention	FALSE	canonical	2	3	junction_8	86.0316220932745	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534884	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.27	chr16	-	2947	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	73.5813065777304	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534862	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.28	chr16	-	3372	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	159	junction_10	38.6447862089285	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534921	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.29	chr16	-	5186	15	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	23	-6	intron_retention	FALSE	canonical	3	164	junction_9	33.213594462853	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534891	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.3	chr16	-	4205	18	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	-2	intron_retention	FALSE	canonical	3	33	junction_13	55.982387245105	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGCTGTTGGCTCAT	NA	False	NA	-1	True	AATAAA	-45	NA	20534893	20521715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.30	chr16	-	3167	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	58.8271634594133	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20534893	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526961_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.31	chr16	-	2152	6	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	-111	-6	intron_retention	FALSE	canonical	3	250	junction_3	13.1362094989384	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20527987	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20527217_20527383
ES.13354.32	chr16	-	3220	19	NNC	ENSMUSG00000022843.18	novel	2730	23	NA	NA	-609	-6	intron_retention	FALSE	canonical	2	4	junction_7	62.3843374217885	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACTTGTGCTGTTGGC	NA	False	NA	-5	True	AATAAA	-41	NA	20531747	20521719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526961_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629
ES.13354.33	chr16	-	4017	20	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	3	-7	intron_retention	FALSE	canonical	2	4	junction_7	73.8128576207323	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACACTTGTGCTGTTGG	NA	False	NA	-6	True	AATAAA	-40	NA	20534911	20521720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526961_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.34	chr16	-	3335	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	159	junction_9	38.19631759327	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACACTTGTGCTGTTGG	NA	False	NA	-6	True	AATAAA	-40	NA	20534921	20521720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.36	chr16	-	4633	18	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-210	-8	intron_retention	FALSE	canonical	3	33	junction_14	56.2631607056976	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20535124	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.37	chr16	-	3926	21	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-1	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	73.8149544469141	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20534915	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529407_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.38	chr16	-	4868	15	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	-8	intron_retention	FALSE	canonical	3	33	junction_11	61.3935531415713	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20534907	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.39	chr16	-	3797	21	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	159	junction_7	37.8886196634293	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20534885	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.4	chr16	-	3523	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	159	junction_9	36.3188360391639	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGCTGTTGGCTCAT	NA	False	NA	-1	True	AATAAA	-45	NA	20534930	20521715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.40	chr16	-	3019	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	50	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	58.5915985899925	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20534811	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528021_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.41	chr16	-	3290	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-8	-8	intron_retention	FALSE	canonical	0	0	junction_10	76.8688549523017	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	False	NA	-7	True	AATAAA	-39	NA	20534922	20521721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527813_20527935_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.42	chr16	-	3883	21	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-14	-10	intron_retention	FALSE	canonical	3	159	junction_7	37.4113619105213	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGAACACTTGTGCTGT	NA	False	NA	-9	True	AATAAA	-37	NA	20534928	20521723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.43	chr16	-	5153	13	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	7	-10	intron_retention	FALSE	canonical	3	164	junction_10	34.7374077904498	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGAACACTTGTGCTGT	NA	False	NA	-9	True	AATAAA	-37	NA	20534907	20521723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20532210_20532362_20532520_20534658
ES.13354.45	chr16	-	3354	18	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-7	-11	intron_retention	FALSE	canonical	1	2	junction_7	64.1349140268531	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAACACTTGTGCTG	NA	False	NA	-10	True	AATAAA	-36	NA	20534874	20521724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.46	chr16	-	2934	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	16	-11	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	57.1271598864692	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGAACACTTGTGCTG	NA	False	NA	-10	True	AATAAA	-36	NA	20534898	20521724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.47	chr16	-	3375	12	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	-158	12	intron_retention	FALSE	canonical	3	214	junction_10	26.9121619869143	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAGAACACTTGTGCT	NA	False	NA	-11	True	AATAAA	-35	NA	20530873	20521725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806
ES.13354.48	chr16	-	3239	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-22	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	60.7278163188684	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAGAACACTTGTGCT	NA	False	NA	-11	True	AATAAA	-35	NA	20534936	20521725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532023_20532210_20532362_20532520_20534658
ES.13354.49	chr16	-	3140	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	17	10	intron_retention	FALSE	canonical	3	13	junction_8	58.4272713015594	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATAGAACACTTGTG	NA	False	NA	-13	True	AATAAA	-33	NA	20534897	20521727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.5	chr16	-	4014	21	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-56	-4	intron_retention	FALSE	canonical	3	164	junction_14	30.921634820947	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534970	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.50	chr16	-	3828	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-14	10	intron_retention	FALSE	canonical	3	159	junction_9	36.6505839806469	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATAGAACACTTGTG	NA	False	NA	-13	True	AATAAA	-33	NA	20534928	20521727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.51	chr16	-	4087	20	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-13	10	intron_retention	FALSE	canonical	2	3	junction_9	75.1713094323416	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATAGAACACTTGTG	NA	False	NA	-13	True	AATAAA	-33	NA	20534880	20521727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529295_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.52	chr16	-	4148	20	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-29	10	intron_retention	FALSE	canonical	3	164	junction_13	33.9225939791088	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATAGAACACTTGTG	NA	False	NA	-13	True	AATAAA	-33	NA	20534943	20521727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.53	chr16	-	3638	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	20	7	intron_retention	FALSE	canonical	2	2	junction_12	62.2077202083049	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCATGTATAGAACACTT	NA	False	NA	-16	True	AATAAA	-30	NA	20534894	20521730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530483_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.55	chr16	-	4225	19	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	4	7	intron_retention	FALSE	canonical	3	164	junction_12	31.0433786502805	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCATGTATAGAACACTT	NA	False	NA	-16	True	AATAAA	-30	NA	20534857	20521730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.56	chr16	-	5084	14	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-10	6	intron_retention	FALSE	canonical	3	164	junction_9	35.0841760382658	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTCATGTATAGAACACT	NA	False	NA	-17	True	AATAAA	-29	NA	20534924	20521731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.57	chr16	-	3416	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	4	intron_retention	FALSE	canonical	0	0	junction_17	71.6915598384225	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCACTCATGTATAGAACA	NA	False	NA	-19	True	AATAAA	-27	NA	20534893	20521733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531135_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.58	chr16	-	3196	24	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	59.6245023915859	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCACTCATGTATAGAA	NA	False	NA	-21	True	AATAAA	-25	NA	20534913	20521735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.59	chr16	-	4304	19	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-12	2	intron_retention	FALSE	canonical	3	164	junction_13	30.8122550574994	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCACTCATGTATAGAA	NA	False	NA	-21	True	AATAAA	-25	NA	20534879	20521735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.6	chr16	-	4193	1	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	1574	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	472	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20525910	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20521700_20525900
ES.13354.60	chr16	-	3092	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	59.9737718155622	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534915	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.61	chr16	-	3641	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	4	0	intron_retention	FALSE	canonical	3	159	junction_8	36.6743962168224	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534910	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.62	chr16	-	4576	17	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	11	0	intron_retention	FALSE	canonical	3	33	junction_12	58.0398569949996	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534850	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20532210_20532362_20532520_20534658
ES.13354.63	chr16	-	2893	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	83.020608812531	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534907	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529295_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.64	chr16	-	3728	21	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	28	0	intron_retention	FALSE	canonical	3	33	junction_14	56.114057953422	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534833	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.65	chr16	-	5516	11	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	214	junction_8	23.4341630957882	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCCACTCATGTATAG	NA	False	NA	-23	True	AATAAA	-23	NA	20534913	20521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20532210_20532362_20532520_20534658
ES.13354.66	chr16	-	3035	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	81.4378582951756	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534874	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526961_20527043_20527217_20527383_20527518_20527851_20528018_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.67	chr16	-	5150	13	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	2	-1	intron_retention	FALSE	canonical	3	164	junction_10	34.2454376523355	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534912	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20532210_20532362_20532520_20534658
ES.13354.68	chr16	-	3436	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	4	-1	intron_retention	FALSE	canonical	2	2	junction_13	60.7944817254367	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534910	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530483_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.69	chr16	-	4372	25	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	81.6603739072181	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20536482	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658_20535728_20536071
ES.13354.7	chr16	-	3220	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-160	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	55.8162014750864	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20535074	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.70	chr16	-	5209	12	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	20	-1	intron_retention	FALSE	canonical	1	3	junction_11	78.2677118021461	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534894	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20532210_20534658
ES.13354.71	chr16	-	3540	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-1	intron_retention	FALSE	canonical	3	33	junction_16	54.4527921778463	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534912	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.72	chr16	-	5012	14	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	17	-1	intron_retention	FALSE	canonical	3	164	junction_10	32.6021380937512	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534897	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530542_20530641_20530933_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.73	chr16	-	3648	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	73.3832853990861	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGCCACTCATGTATA	NA	False	NA	-24	True	AATAAA	-22	NA	20534913	20521738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526395_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.74	chr16	-	3901	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	20	-3	intron_retention	FALSE	canonical	3	164	junction_15	33.354886845173	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTAGCCACTCATGTA	NA	False	NA	-26	True	AATAAA	-20	NA	20534894	20521740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.75	chr16	-	3084	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	5	-3	intron_retention	FALSE	canonical	2	3	junction_9	84.6415410787781	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTAGCCACTCATGTA	NA	False	NA	-26	True	AATAAA	-20	NA	20534856	20521740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.76	chr16	-	3107	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_17	54.1860200024426	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAATTAGCCACTCATG	NA	False	NA	-28	True	AATAAA	-18	NA	20534921	20521742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.77	chr16	-	5003	15	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	5	-5	intron_retention	FALSE	canonical	3	33	junction_11	61.3941764173051	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAATTAGCCACTCATG	NA	False	NA	-28	True	AATAAA	-18	NA	20534856	20521742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.78	chr16	-	4555	23	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	153	-5	intron_retention	FALSE	canonical	1	1	junction_22	72.1349315318691	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAATTAGCCACTCATG	NA	False	NA	-28	True	AATAAA	-18	NA	20536343	20521742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658_20535728_20536071
ES.13354.79	chr16	-	3135	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	60.2240931759523	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAATTAGCCACTCATG	NA	False	NA	-28	True	AATAAA	-18	NA	20534882	20521742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526688_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.8	chr16	-	3708	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	-4	intron_retention	FALSE	canonical	3	159	junction_8	36.983234541995	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534907	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.80	chr16	-	3374	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_11	76.8199703933793	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAATTAGCCACTCATG	NA	False	NA	-28	True	AATAAA	-18	NA	20534914	20521742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528777_20529021_20529169_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.81	chr16	-	3455	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	-4	intron_retention	FALSE	canonical	3	159	junction_8	39.5153175042327	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATAAACACCTAATTAG	NA	False	NA	-37	True	AATAAA	-9	NA	20534907	20521751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.82	chr16	-	3407	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-11	-18	intron_retention	FALSE	canonical	3	33	junction_17	55.2437872801807	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534925	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.83	chr16	-	5772	5	NIC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	-180	-18	intron_retention	FALSE	canonical	3	250	junction_2	12.794041581924	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20528056	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20526029_20526168_20526667_20526826_20526942_20527043
ES.13354.84	chr16	-	3471	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	17	-18	intron_retention	FALSE	canonical	0	0	junction_11	72.1267250248472	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534897	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528777_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.85	chr16	-	4201	19	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	7	-18	intron_retention	FALSE	canonical	3	164	junction_12	34.1214696541345	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534907	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.86	chr16	-	4021	21	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-187	-18	intron_retention	FALSE	canonical	3	33	junction_16	55.612588502964	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20535101	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.87	chr16	-	4015	20	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	-18	intron_retention	FALSE	canonical	3	164	junction_13	34.3333019569732	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534893	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.88	chr16	-	4782	22	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	14	-18	intron_retention	FALSE	non_canonical	0	0	junction_6	86.5889499792173	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20536482	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527041_20527217_20527383_20528066_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658_20535728_20536071
ES.13354.89	chr16	-	4281	19	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-1	-18	intron_retention	FALSE	canonical	3	164	junction_12	31.7545077970372	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534915	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.9	chr16	-	4255	19	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	164	junction_12	32.0847642778536	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTGCTGTTGGCTC	NA	False	NA	-3	True	AATAAA	-43	NA	20534886	20521717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.90	chr16	-	5161	14	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-7	-18	intron_retention	FALSE	canonical	3	164	junction_10	32.7733836299552	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534874	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20532210_20532362_20532520_20534658
ES.13354.92	chr16	-	5597	16	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-147	-18	intron_retention	FALSE	non_canonical	0	0	junction_14	89.2585756851034	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20535061	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20530542_20530641_20530727_20530806_20530933_20531061_20531538_20531629_20531759_20532077_20532210_20532362_20532475_20534674_20534836_20534921
ES.13354.93	chr16	-	5011	13	NNC	ENSMUSG00000022843.18	novel	3757	20	NA	NA	18	-18	intron_retention	FALSE	canonical	3	33	junction_9	64.0778606245731	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534843	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528700_20529021_20529390_20530439_20530727_20530806_20530887_20531061_20531538_20531629_20532210_20532362_20532520_20534658
ES.13354.94	chr16	-	3112	24	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.8082299673164	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534912	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526370_20526588_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.95	chr16	-	3364	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	-8	-18	intron_retention	FALSE	canonical	0	0	junction_9	60.3177536464902	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534922	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527514_20527813_20528066_20528319_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.96	chr16	-	3804	21	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	5	-18	intron_retention	FALSE	canonical	0	0	junction_17	63.2207244501358	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534856	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531633_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.97	chr16	-	3132	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	21	-18	intron_retention	FALSE	canonical	1	1	junction_5	61.8047176941348	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534893	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.98	chr16	-	3704	22	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	7	-18	intron_retention	FALSE	canonical	3	164	junction_15	32.9770758003901	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534907	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ES.13354.99	chr16	-	3651	20	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	-8	-18	intron_retention	FALSE	canonical	3	33	junction_15	57.9203292716494	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAATAAATAGAAT	NA	False	NA	-51	True	NA	NA	NA	20534922	20521765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531759_20532077_20532210_20532362_20532520_20534658
ES.13355.1	chr16	-	5435	7	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	1	6359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.05538513813742	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCCTGAGGGAGGTAC	NA	False	NA	NA	False	AATAGA	-44	NA	20549347	20536844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20536855_20540039_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.10	chr16	-	1707	5	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_1	10.3682206766639	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGTGCTTTCATACA	NA	False	NA	-2	True	TATAAA	-19	NA	20549284	20543911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20545218_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.12	chr16	-	1771	5	NIC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	1	-9	intron_retention	FALSE	canonical	3	17	junction_3	4.84767985741633	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTATATGTGCTTTC	NA	False	NA	-7	True	TATAAA	-14	NA	20549347	20543916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.13	chr16	-	1492	6	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	9.57914401186244	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTATATGTGCTTTC	NA	False	NA	-7	True	TATAAA	-14	NA	20549351	20543916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547537_20547813_20547968_20549252
ES.13355.14	chr16	-	1599	4	NIC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	-3	-10	intron_retention	FALSE	canonical	1	2	junction_2	11.7284080571728	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTATATGTGCTTT	NA	False	NA	-8	True	TATAAA	-13	NA	20549304	20543917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20545224_20547131_20547219_20547813_20547968_20549252
ES.13355.15	chr16	-	1633	6	FSM	ENSMUSG00000022847.16	ENSMUST00000232217.2	1620	6	23	-36	-6	-18	multi-exon	FALSE	canonical	0	0	junction_4	9.9196774141098	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACTAATTCTCTATA	NA	False	NA	-16	True	TATAAA	-5	NA	20549354	20543925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547684_20547813_20547968_20549252
ES.13355.2	chr16	-	4334	7	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	0	3155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.1005505368978	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTAAACTCTTTGTTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	20549348	20540048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20541891_20542992_20544852_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.3	chr16	-	1545	6	NNC	ENSMUSG00000022847.16	novel	2416	6	NA	NA	-8	3146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.81019877474458	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTATTTAAACT	NA	False	NA	NA	False	AGTAAA	-6	NA	20549385	20540057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20540933_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.4	chr16	-	3384	7	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	13	2235	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.05538513813742	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTTCTCCCTCTCG	NA	False	NA	NA	False	AATAAA	-26	NA	20549335	20540968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20541893_20542992_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ES.13355.5	chr16	-	3515	7	NNC	ENSMUSG00000022847.16	novel	1620	6	NA	NA	11	2227	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2531175171419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTCATGCTAAGTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	20549366	20540976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20541895_20542992_20544852_20545055_20545224_20547131_20547219_20547468_20547684_20547813_20547968_20549252
ES.13355.6	chr16	-	2525	6	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	-12	1456	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.5308282443197	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAAAAAAGTGCTTG	NA	False	NA	NA	False	AATAAA	-7	NA	20549389	20541747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20541887_20542992_20544833_20545055_20545224_20547131_20547219_20547813_20547968_20549252
ES.13355.7	chr16	-	2631	4	ISM	ENSMUSG00000022847.16	ENSMUST00000076422.13	1558	6	1772	-1343	1725	639	3prime_fragment	FALSE	canonical	3	14	junction_1	4.10960933531265	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACATAATGGCACATG	870	False	NA	NA	False	AATAAA	-28	NA	20547576	20542564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468
ES.13355.8	chr16	-	1975	4	NIC	ENSMUSG00000022847.16	novel	1620	6	NA	NA	22	-1	intron_retention	FALSE	canonical	3	18	junction_2	4.49691252107735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGCTTTCATACATTA	NA	False	NA	1	True	TATAAA	-22	NA	20549326	20543908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_20545224_20547131_20547219_20547468_20547968_20549252
ES.13355.9	chr16	-	1879	8	NNC	ENSMUSG00000022847.16	novel	1558	6	NA	NA	-1480	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.279760181432	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGCTTTCATACATT	NA	False	NA	0	True	TATAAA	-21	NA	20550857	20543909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252_20549299_20549724_20549841_20550600
ES.13356.1	chr16	-	179	1	Intergenic	novelGene_11203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20594972	20594793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20594800_20595000
ES.13357.1	chr16	-	193	1	Intergenic	novelGene_11204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTGTGGTGTTTTTT	9156	False	NA	NA	False	NA	NA	NA	20610692	20610499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20610500_20610700
ES.13358.1	chr16	-	177	1	Intergenic	novelGene_11206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACAAGGTATAACT	NA	False	NA	NA	False	NA	NA	NA	20631624	20631447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20631400_20631600
ES.13359.1	chr16	-	727	3	Genic_Genomic	ENSMUSG00000099764.2	novel	496	1	NA	NA	-15800	34	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	20657190	20640860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_20641420_20650572_20650653_20657102
ES.13359.2	chr16	-	782	1	FSM	ENSMUSG00000099764.2	ENSMUST00000127484.2	496	1	-252	-34	-252	34	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	20641642	20640860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20640900_20641600
ES.1336.1	chr1	-	1264	8	NNC	ENSMUSG00000054387.14	novel	612	2	NA	NA	-11	44538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.977334845771	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGGTGTCTTTGTCACA	NA	False	NA	NA	False	NA	NA	NA	132953106	132842683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132842981_132843165_132843376_132843553_132843675_132846302_132846449_132929020_132929182_132931528_132931629_132946514_132946623_132952985
ES.1336.11	chr1	-	3242	1	Genic_Genomic	ENSMUSG00000054387.14	novel	NA	NA	NA	NA	12316	356	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGTTTGTTTGTTTT	NA	False	NA	NA	False	AATGAA	-22	NA	132916843	132913601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_132913600_132916800
ES.1336.12	chr1	-	7296	12	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	1	127	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	159.036198384815	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAATTGTATTCATTTC	NA	False	NA	1	True	ATTAAA	-34	NA	132953075	132913830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.13	chr1	-	9101	3	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	25967	-127	1972	127	3prime_fragment	FALSE	canonical	3	375	junction_1	26	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAATTGTATTCATTTC	NA	False	NA	1	True	ATTAAA	-34	NA	132927187	132913830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132919964_132922240_132922322_132924300
ES.1336.14	chr1	-	7121	11	FSM	ENSMUSG00000054387.14	ENSMUST00000185398.7	2010	11	13	-5124	-3	117	multi-exon	FALSE	canonical	3	61	junction_6	121.196699625031	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCATATTAGAGTAATTG	NA	False	NA	-9	True	ATTAAA	-24	NA	132953079	132913840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.15	chr1	-	7187	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	34	-116	-25	116	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCATATTAGAGTAATT	NA	False	NA	-10	True	ATTAAA	-23	NA	132953120	132913841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.16	chr1	-	7117	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-25	114	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTGCATATTAGAGTAA	NA	False	NA	-12	True	ATTAAA	-21	NA	132953120	132913843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.19	chr1	-	7218	12	NIC	ENSMUSG00000054387.14	novel	3490	12	NA	NA	-10	113	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	160.303018846308	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTTGCATATTAGAGTA	NA	False	NA	-13	True	ATTAAA	-20	NA	132953105	132913844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132947091_132947170_132952985
ES.1336.2	chr1	-	5614	2	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTCTGATTTATTCC	NA	False	NA	NA	False	AATAAA	-23	NA	132912403	132906186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132908913_132909515
ES.1336.20	chr1	-	7074	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	33	-2	-26	2	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTGTCATTATTGGAA	NA	False	NA	-3	True	ATTAAA	-17	NA	132953121	132913955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.22	chr1	-	6819	9	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	27	junction_3	132.45700953517	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGTCATTATTGGA	NA	False	NA	-4	True	ATTAAA	-16	NA	132953096	132913956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.23	chr1	-	7048	11	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	112.364629666101	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953126	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.24	chr1	-	7023	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953140	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.25	chr1	-	6957	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-584	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	137.48517316244	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132947180	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132947091
ES.1336.26	chr1	-	7003	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	139.233760273865	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953103	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938883_132940374_132940453_132946514_132946623_132952985
ES.1336.29	chr1	-	7234	12	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.822484492496	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953085	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132929315_132929514_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.3	chr1	-	6183	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGATACTCATTCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	132912377	132906194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132906200_132912400
ES.1336.30	chr1	-	6938	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-601	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	175.840907332048	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132947197	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132946514_132946623_132947091
ES.1336.32	chr1	-	8864	5	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	19157	0	-1934	0	intron_retention	FALSE	canonical	3	375	junction_1	27.5352047386614	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132933997	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528
ES.1336.34	chr1	-	6050	9	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.442308632902	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953075	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919317_132929452_132929510_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.38	chr1	-	7274	3	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	27667	0	3672	0	3prime_fragment	FALSE	canonical	3	375	junction_1	26	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132925487	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132919964_132922240_132922322_132924300
ES.1336.39	chr1	-	6968	11	NNC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.393587233198	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953108	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.4	chr1	-	10130	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	2	-8218	0	3084	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGTGGTGTTATCATT	NA	False	NA	2	True	NA	NA	NA	132953092	132910873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.40	chr1	-	6705	8	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-6819	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.204685443441	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132938882	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132925239_132925379_132929020_132929182_132931528_132931629_132936874_132936931_132938802
ES.1336.41	chr1	-	6955	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	133.146535816746	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953090	132913957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938883_132940406_132940450_132946514_132946623_132952985
ES.1336.42	chr1	-	6970	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.360917478143	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953085	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.43	chr1	-	7020	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-231	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.546987802838	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132946827	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132946742
ES.1336.44	chr1	-	7012	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	137.716384171005	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953137	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132946514_132946623_132952985
ES.1336.45	chr1	-	7108	12	FSM	ENSMUSG00000054387.14	ENSMUST00000067429.10	3490	12	6	-3624	-4	-1	multi-exon	FALSE	canonical	2	9	junction_11	148.060854140876	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953080	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132947091_132947170_132952985
ES.1336.47	chr1	-	6815	10	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.441137030643	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953088	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.48	chr1	-	1879	12	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	133.645454236261	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953103	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132914737_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.49	chr1	-	6905	10	NNC	ENSMUSG00000054387.14	novel	2799	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.863988018595	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953085	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.5	chr1	-	3233	12	NNC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	0	3084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.389814263187	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGTGGTGTTATCATT	NA	False	NA	2	True	NA	NA	NA	132953076	132910873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132912989_132913466_132913579_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.50	chr1	-	6842	10	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.417931573839	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953097	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919898_132924487_132924574_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.52	chr1	-	4323	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	138.739468068751	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953101	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132916778_132919437_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.53	chr1	-	7155	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.75350696019	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953075	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132929315_132929514_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.54	chr1	-	6910	10	NIC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	1	27	junction_3	125.396359251695	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTTTGTCATTATTG	NA	False	NA	-6	True	ATTAAA	-14	NA	132953118	132913958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.57	chr1	-	7071	11	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	57	-3	intron_retention	FALSE	canonical	0	0	junction_1	166.600240095865	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953011	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132914737_132916669_132916778_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.58	chr1	-	4368	12	NNC	ENSMUSG00000054387.14	novel	3490	12	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	127.409926050518	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953080	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132916778_132919437_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.59	chr1	-	6956	10	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.134250324601	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953082	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919958_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.6	chr1	-	3723	12	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	1	3084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.551322861966	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGTGGTGTTATCATT	NA	False	NA	2	True	NA	NA	NA	132953085	132910873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132913579_132919913_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.60	chr1	-	7038	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	127.794992077155	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953101	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932449_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.61	chr1	-	3837	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.58069241032	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953075	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132916778_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.62	chr1	-	7101	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.546987802838	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953104	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952936
ES.1336.63	chr1	-	7084	12	NNC	ENSMUSG00000054387.14	novel	3490	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	174.599802145051	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953082	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932460_132936874_132936931_132938802_132938883_132940406_132940450_132946514_132946623_132952985
ES.1336.64	chr1	-	10439	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	127.794992077155	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953085	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132935866_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.65	chr1	-	6948	10	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	140.443741207803	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953075	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924441_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.67	chr1	-	3782	10	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.134250324601	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953088	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132916778_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.68	chr1	-	6676	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.33024526686	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953101	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919607_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ES.1336.69	chr1	-	7151	12	NNC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	170.645880492105	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTTTTGTCATTAT	NA	False	NA	-8	True	ATTAAA	-12	NA	132953089	132913960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.7	chr1	-	9123	11	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	0	3081	intron_retention	FALSE	canonical	0	0	junction_2	166.422504487825	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGGGTGGTGTTATC	NA	False	NA	-1	True	NA	NA	NA	132953076	132910876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132913579_132919437_132919607_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.70	chr1	-	7039	11	NIC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	-628	-4	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	148.427086476829	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTTTTGTCATTA	NA	False	NA	-9	True	ATTAAA	-11	NA	132947224	132913961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132947091
ES.1336.72	chr1	-	5617	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	-1351	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTGCTTATGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	132953085	132915308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.73	chr1	-	5231	12	NNC	ENSMUSG00000054387.14	novel	2010	11	NA	NA	1	1716	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	170.645880492105	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTGGAATTTTGCACT	NA	False	NA	NA	False	AGTAAA	-17	NA	132953075	132915866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.74	chr1	-	4896	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	15	-2112	-4	1555	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGATGCCTCTTACA	NA	False	NA	NA	False	NA	NA	NA	132953080	132916027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.75	chr1	-	4790	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	2	1442	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCGCTGTTTTGTTCTG	NA	False	NA	NA	False	AAGAAA	-18	NA	132953090	132916140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.76	chr1	-	4867	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	-7	-2946	-6	1437	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTTCGCTGTTTTG	NA	False	NA	NA	False	AAGAAA	-13	NA	132953101	132916145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.77	chr1	-	2447	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	82	4576	-4	-394	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCTGAATCCCGTATGC	NA	False	NA	NA	False	NA	NA	NA	132953072	132918533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.78	chr1	-	3085	6	ISM	ENSMUSG00000054387.14	ENSMUST00000185398.7	2010	11	19115	-11	-1914	11	3prime_fragment	FALSE	canonical	3	271	junction_5	64.9504426466825	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTCAGTCGCTCATTG	NA	False	NA	80	True	ATTAAA	-28	NA	132933977	132918953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391
ES.1336.79	chr1	-	1897	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	1	57	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTGTTATGTAATGT	NA	False	NA	-1	True	AATACA	-19	NA	132953091	132919034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.8	chr1	-	3802	12	NNC	ENSMUSG00000054387.14	novel	3490	12	NA	NA	-10	3081	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	125.601100168893	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGGGTGGTGTTATC	NA	False	NA	-1	True	NA	NA	NA	132953105	132910876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132913579_132919913_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.80	chr1	-	2105	12	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-2	57	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	159.036198384815	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTGTTATGTAATGT	NA	False	NA	-1	True	AATACA	-19	NA	132953088	132919034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.81	chr1	-	1614	7	NIC	ENSMUSG00000054387.14	novel	2799	10	NA	NA	3	57	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	155.793666965852	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTGTTATGTAATGT	NA	False	NA	-1	True	AATACA	-19	NA	132953073	132919034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132946514_132946623_132952985
ES.1336.83	chr1	-	7133	9	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-3	57	intron_retention	FALSE	canonical	0	0	junction_8	139.529062832802	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTGTTATGTAATGT	NA	False	NA	-1	True	AATACA	-19	NA	132953079	132919034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ES.1336.85	chr1	-	2030	12	NNC	ENSMUSG00000054387.14	novel	1914	11	NA	NA	-3	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.007523841552	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTGTTATGTAATG	NA	False	NA	-2	True	AATACA	-18	NA	132953079	132919035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132931704_132931845_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.86	chr1	-	1760	10	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	48	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.876456390057	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTGTTATGTAATG	NA	False	NA	-2	True	AATACA	-18	NA	132953020	132919035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.87	chr1	-	1906	11	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-194	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.546987802838	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGTGTTATGTAATG	NA	False	NA	-2	True	AATACA	-18	NA	132946790	132919035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132946742
ES.1336.88	chr1	-	7060	9	NNC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	0	54	intron_retention	FALSE	canonical	0	0	junction_2	162.824867572493	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCCTGGTGTTATGTAA	NA	False	NA	-4	True	AATACA	-16	NA	132953076	132919037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132919964_132922240_132922322_132924491_132924574_132929020_132929182_132931528_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.89	chr1	-	1905	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	65	5135	3	-1	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTTATTCACTTCCAA	NA	False	NA	-59	True	AATACA	-14	NA	132953089	132919092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.9	chr1	-	7743	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	15	-5844	-3	710	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGCTCCACCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	132953079	132913247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.91	chr1	-	1888	11	ISM	ENSMUSG00000054387.14	ENSMUST00000067429.10	3490	12	5908	1510	-582	-1	3prime_fragment	FALSE	canonical	3	28	junction_10	125.018598616366	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTTATTCACTTCCAA	NA	False	NA	-59	True	AATACA	-14	NA	132947178	132919092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132947091
ES.1336.92	chr1	-	1599	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	-11	1211	-11	-259	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAATCAGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	132953106	132919350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ES.1336.93	chr1	-	1604	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	62	5439	0	-305	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGAGTCAGTCACAGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	132953092	132919396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.95	chr1	-	6783	9	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	-1	-305	intron_retention	FALSE	canonical	3	238	junction_7	62.0975794616827	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGAGTCAGTCACAGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	132953093	132919396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.96	chr1	-	1146	10	ISM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	79	8157	1	2264	5prime_fragment	FALSE	canonical	3	199	junction_5	85.9613751907876	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	132953075	132922114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ES.1336.97	chr1	-	1940	1	NIC	ENSMUSG00000054387.14	novel	4694	11	NA	NA	4668	-3100	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132941928	132939988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_132940000_132941900
ES.1336.98	chr1	-	169	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGAGATTTACTTA	NA	False	NA	-5	True	NA	NA	NA	132949478	132949309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132949300_132949500
ES.13360.1	chr16	-	150	1	Intergenic	novelGene_11207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACATAAATAAATAAA	4966	False	NA	NA	False	NA	NA	NA	20729563	20729413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20729400_20729600
ES.13361.1	chr16	-	177	1	Intergenic	novelGene_11208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	20745594	20745417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20745400_20745600
ES.13362.1	chr16	+	4061	1	FSM	ENSMUSG00000116659.2	ENSMUST00000232604.2	885	1	-123	-3053	-123	3053	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAACCTCTTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	20747595	20751656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_20747600_20751700
ES.13363.1	chr16	+	179	1	Intergenic	novelGene_11209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAACTGTATAA	3389	False	NA	NA	False	NA	NA	NA	20932278	20932457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20932300_20932500
ES.13364.1	chr16	-	176	1	Intergenic	novelGene_11210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	20948402	20948226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_20948200_20948400
ES.13365.1	chr16	-	1362	1	FSM	ENSMUSG00000090356.3	ENSMUST00000170665.3	1346	1	-52	36	-52	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	20972802	20971440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_20971400_20972800
ES.13366.1	chr16	+	214	1	Intergenic	novelGene_11211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAATAAGGAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	20982589	20982803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_20982600_20982800
ES.13367.1	chr16	-	171	1	Intergenic	novelGene_11212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATG	NA	False	NA	NA	False	NA	NA	NA	21008574	21008403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21008400_21008600
ES.13368.1	chr16	+	183	1	Intergenic	novelGene_11213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGGGCAGGGGAAGC	NA	False	NA	NA	False	NA	NA	NA	21010864	21011047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21010900_21011000
ES.13369.1	chr16	-	158	1	Intergenic	novelGene_11214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21012722	21012564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21012600_21012700
ES.1337.1	chr1	+	132	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132956840	132956972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_132956800_132957000
ES.13370.1	chr16	+	4334	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	-143	-6	-143	5	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTCGTTCTTCCTCC	NA	False	NA	17	True	AATAAA	-20	NA	21023361	21042060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.13	chr16	+	4227	17	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	64.0141280792764	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023521	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21027530_21027608_21031639_21031705_21033074_21033748_21035945_21036102_21036781_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.14	chr16	+	4261	16	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_6	41.8489346738162	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023521	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037463_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.16	chr16	+	4547	13	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	140	junction_5	11.9396631257149	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGCCCCTGCTCGTT	NA	False	NA	9	True	AATAAA	-12	NA	21023528	21042052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.17	chr16	+	4283	15	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	-1	intron_retention	FALSE	canonical	3	140	junction_8	11.404662490868	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023531	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.18	chr16	+	4026	16	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_11	41.8078142616106	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023531	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039514_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.2	chr16	+	4108	2	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023496	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21027446_21041894
ES.13370.21	chr16	+	6110	6	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	0	intron_retention	FALSE	canonical	3	140	junction_4	12.7027556065603	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023531	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21037898_21038204_21038258_21039169
ES.13370.22	chr16	+	4752	13	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	-3	intron_retention	FALSE	canonical	3	140	junction_8	10.7496769977314	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGCCCCTGCTCGT	NA	False	NA	8	True	AATAAA	-11	NA	21023531	21042051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21040251_21040376_21040527_21040614_21040809_21040898
ES.13370.23	chr16	+	4259	15	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	-3	intron_retention	FALSE	canonical	3	140	junction_8	11.4866826173191	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGCCCCTGCTCGT	NA	False	NA	8	True	AATAAA	-11	NA	21023531	21042051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.24	chr16	+	4093	15	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_1	43.0742714058271	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023531	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.25	chr16	+	4815	15	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	32	-1	intron_retention	FALSE	canonical	3	140	junction_7	11.4403956689104	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023536	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.27	chr16	+	3788	16	NNC	ENSMUSG00000005958.16	novel	4748	17	NA	NA	-99	-3	intron_retention	FALSE	canonical	0	0	junction_1	41.8687897550855	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGCCCCTGCTCGT	NA	False	NA	8	True	AATAAA	-11	NA	21029745	21042051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21029861_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.28	chr16	+	3021	11	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	1348	-1	intron_retention	FALSE	canonical	3	140	junction_4	12.3434192993676	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21036914	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.3	chr16	+	4106	17	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-8	0	intron_retention	FALSE	canonical	2	4	junction_11	39.6227818779803	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCCCTGCTCGTTCTT	NA	False	NA	12	True	AATAAA	-15	NA	21023496	21042055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039477_21039564_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.4	chr16	+	4355	16	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_7	56.0038093942427	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023496	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024182_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037794_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.5	chr16	+	4403	14	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	140	junction_8	11.8351597334873	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGCCCCTGCTCGT	NA	False	NA	8	True	AATAAA	-11	NA	21023497	21042051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040809_21040898_21041055_21041157
ES.13370.6	chr16	+	4024	16	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_11	41.8078142616106	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023497	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039477_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.7	chr16	+	4588	15	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_5	42.8759482551175	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023497	21042054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037238_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ES.13370.8	chr16	+	4525	13	NNC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_4	61.0647993710142	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCCTGCTCGTTCTTCCT	NA	False	NA	15	True	AATAAA	-18	NA	21023502	21042058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036106_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21040251_21040614_21041055_21041157
ES.13370.9	chr16	+	4270	15	NIC	ENSMUSG00000005958.16	novel	4185	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	140	junction_8	11.5062095036922	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCCCCTGCTCGTTC	NA	False	NA	10	True	AATAAA	-13	NA	21023506	21042053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040809_21040898_21041055_21041157
ES.13371.1	chr16	-	177	1	Intergenic	novelGene_11215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGGTTCAG	NA	False	NA	NA	False	NA	NA	NA	21119521	21119344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21119300_21119500
ES.13372.1	chr16	-	1447	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	8	0	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTTGCACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	21152098	21150651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21150700_21152100
ES.13372.2	chr16	-	1024	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	-5	436	-5	308	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTTTGTTGTAGTTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	21152111	21151087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21151100_21152100
ES.13373.1	chr16	-	312	1	Intergenic	novelGene_11216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACAAACAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	21191497	21191185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21191200_21191500
ES.13373.2	chr16	-	175	1	Intergenic	novelGene_11217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGTGAGCAGGCTT	NA	False	NA	NA	False	NA	NA	NA	21191497	21191322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21191300_21191500
ES.13374.1	chr16	+	173	1	Intergenic	novelGene_11218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGAGGATGTG	2782	False	NA	NA	False	NA	NA	NA	21207836	21208009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21207800_21208000
ES.13375.1	chr16	+	5045	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	-98	-12	-15	4	multi-exon	TRUE	canonical	3	107	junction_1	17.1577937561462	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTGGTTGTCAGTCT	NA	False	NA	25	True	AATAAA	-31	NA	21241852	21463434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.10	chr16	+	4675	43	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	29.4071523994571	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCTGCCAGTCTCTT	NA	False	NA	13	True	AATAAA	-19	NA	21241922	21463422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.11	chr16	+	4911	46	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_44	28.0979240039782	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTGCCAGTCTCTTGG	NA	False	NA	15	True	AATAAA	-21	NA	21241922	21463424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
ES.13375.12	chr16	+	3599	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	12	12452	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_35	40.6626440026217	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGGACAAGAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	21241930	21364367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
ES.13375.13	chr16	+	4519	42	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	29.7133038943245	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241930	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.14	chr16	+	4614	43	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	29.4301509824206	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCAGTCTCTTGGTT	NA	False	NA	17	True	AATAAA	-23	NA	21241930	21463426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.15	chr16	+	4232	44	NIC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	12	-604	combination_of_known_junctions	FALSE	canonical	1	1	junction_43	33.3168897606111	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTTGTTTGATTGTT	NA	False	NA	NA	False	NA	NA	NA	21241930	21397393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21397210
ES.13375.17	chr16	+	4945	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	41.7803521536973	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241930	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393367_21393440_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.18	chr16	+	4960	46	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.5244534469014	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGGCCTGCCAGTCTC	NA	False	NA	11	True	AATAAA	-17	NA	21241931	21463420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262937_21267061_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.2	chr16	+	3712	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	11	12460	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_35	35.0999784566077	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGCTGCACCAATCTG	NA	False	NA	NA	False	NA	NA	NA	21241878	21364375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
ES.13375.20	chr16	+	4058	37	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	31.4589679847681	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241931	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.21	chr16	+	4898	44	FSM	ENSMUSG00000033653.19	ENSMUST00000096191.11	4952	44	64	-10	13	10	multi-exon	FALSE	canonical	1	1	junction_43	27.0179116518476	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCATTGTCTTAGTTACT	NA	False	NA	NA	False	NA	NA	NA	21241931	21398007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21397210
ES.13375.22	chr16	+	5358	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	-19	-404	13	396	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCGAATGACTTTTGCAAT	NA	False	NA	NA	False	AATACA	-28	NA	21241931	21463826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.23	chr16	+	4196	41	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.8697073071412	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241931	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.28	chr16	+	5040	29	NIC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	-14	-4482	intron_retention	FALSE	canonical	3	107	junction_1	15.3247165969068	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAACATGTCAGAAC	NA	False	NA	NA	False	NA	NA	NA	21241936	21347433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285
ES.13375.29	chr16	+	4621	45	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_42	27.6948394512661	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241936	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21426917_21426972_21459428_21459510_21462870
ES.13375.3	chr16	+	4900	46	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_44	34.100896045575	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241879	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
ES.13375.32	chr16	+	4775	45	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	28.8518587280978	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241943	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.33	chr16	+	4647	45	NNC	ENSMUSG00000033653.19	novel	5032	47	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.4057426675182	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241945	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253726_21254532_21254572_21261083_21261215_21262838_21262933_21266004_21266042_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.35	chr16	+	3699	38	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	-4	12438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.4387537175376	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAACTTTTCAACTGAG	NA	False	NA	NA	False	NA	NA	NA	21241946	21364353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21273826_21273904_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
ES.13375.36	chr16	+	4873	46	NNC	ENSMUSG00000033653.19	novel	5032	47	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.6673040411486	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCAGGCCTGCCAGT	NA	False	NA	8	True	AATAAA	-14	NA	21241947	21463417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21274983_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.37	chr16	+	4940	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	28.3451002290401	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCTCTTGGTTGTCAG	NA	False	NA	22	True	AATAAA	-28	NA	21241948	21463431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336100_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.38	chr16	+	4364	44	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	-1	15147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	27.1458014725645	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTTCATATTTTTTG	NA	False	NA	NA	False	AAGAAA	-18	NA	21241949	21415595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395447_21415216
ES.13375.39	chr16	+	5253	48	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	34.9152631354673	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGTCTCTTGGTTGT	NA	False	NA	19	True	AATAAA	-25	NA	21241949	21463428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21459764_21460076_21462870
ES.13375.40	chr16	+	5083	49	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	45.0741672752316	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	16	True	AATAAA	-22	NA	21241949	21463425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21347161_21347217_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21397210_21397300_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.41	chr16	+	5470	46	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-1	582	combination_of_known_junctions	FALSE	canonical	0	0	junction_45	35.179300872481	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGTGTCACCTCGTC	NA	False	NA	NA	False	NA	NA	NA	21241949	21460904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21459764
ES.13375.42	chr16	+	4968	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	28.3673245825149	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241949	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21337007_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.43	chr16	+	4909	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.2607692305911	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCAGTCTCTTGGTT	NA	False	NA	17	True	AATAAA	-23	NA	21241950	21463426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254532_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.44	chr16	+	3242	29	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	-6245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	31.9636871452335	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTCTTTCTCTGATGCT	NA	False	NA	NA	False	NA	NA	NA	21241950	21345670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296593_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126
ES.13375.45	chr16	+	4982	48	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	35.5334691977536	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241950	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21344434_21344474_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.47	chr16	+	4985	48	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.1003089522992	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241950	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21244220_21244270_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.48	chr16	+	5170	50	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	44.2793750753052	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241954	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116_21364186_21365710_21365770_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.49	chr16	+	5124	47	NIC	ENSMUSG00000033653.19	novel	3350	32	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.6022245069409	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	16	True	AATAAA	-22	NA	21241984	21463425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21242196_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.5	chr16	+	4956	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	27.8186895737924	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGCAGGCCTGCCAGTC	NA	False	NA	9	True	AATAAA	-15	NA	21241901	21463418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296259_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.50	chr16	+	4152	38	NIC	ENSMUSG00000033653.19	novel	3350	32	NA	NA	-14	1247	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5575233424276	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTACCAACAGCAATAAAT	NA	False	NA	NA	False	AGTAAA	-20	NA	21242007	21379420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21242196_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947
ES.13375.52	chr16	+	4915	46	ISM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	11484	-3	11413	0	3prime_fragment	FALSE	canonical	3	130	junction_4	15.7563234415603	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	False	NA	16	True	AATAAA	-22	NA	21253434	21463425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.53	chr16	+	4866	45	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	11413	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_43	27.579814678238	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21253434	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
ES.13375.56	chr16	+	4540	45	ISM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	12551	-6	12480	-2	3prime_fragment	FALSE	canonical	3	130	junction_3	15.5360650803805	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGTCTCTTGGTTGT	NA	False	NA	19	True	AATAAA	-25	NA	21254501	21463428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.57	chr16	+	9392	43	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	19053	385	intron_retention	FALSE	canonical	0	0	junction_24	36.1365905226707	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTATGAACTCGCGAATG	NA	False	NA	NA	False	AATACA	-17	NA	21261074	21463815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21261215_21262838_21262933_21266004_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21344637_21344742_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428
ES.13375.58	chr16	+	3906	39	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	19176	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	38.4545365989704	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21261197	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296645_21297143_21297234_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.59	chr16	+	3887	38	NNC	ENSMUSG00000033653.19	novel	5032	47	NA	NA	-8991	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	38.4527448507845	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCAGTCTCTTGGTT	NA	False	NA	17	True	AATAAA	-23	NA	21279945	21463426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21355467_21355554_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.6	chr16	+	3915	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	-11	12692	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_35	35.0999784566077	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAGCTCAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	21241907	21364607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
ES.13375.60	chr16	+	3050	28	NIC	ENSMUSG00000033653.19	novel	5032	47	NA	NA	7657	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_26	33.4275622868159	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21296593	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
ES.13375.61	chr16	+	3694	28	NNC	ENSMUSG00000033653.19	novel	804	10	NA	NA	15732	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.1471438753265	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	4770	False	NA	14	True	AATAAA	-20	NA	21304668	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21305404_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.62	chr16	+	3329	27	NNC	ENSMUSG00000033653.19	novel	804	10	NA	NA	15806	0	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_25	44.2279765004623	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	4844	False	NA	16	True	AATAAA	-22	NA	21304742	21463425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21305165_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
ES.13375.63	chr16	+	3389	28	NNC	ENSMUSG00000033653.19	novel	804	10	NA	NA	15809	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.1526378089284	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTGGTTGTCAGTCT	4847	False	NA	25	True	AATAAA	-31	NA	21304745	21463434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21305165_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.64	chr16	+	1895	15	ISM	ENSMUSG00000033653.19	ENSMUST00000118138.8	3060	24	24428	3	-51	0	3prime_fragment	FALSE	canonical	3	145	junction_4	17.5435318623156	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCTGCCAGTCTCTT	NA	False	NA	13	True	AATAAA	-19	NA	21351810	21463422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.65	chr16	+	3018	1	NIC	ENSMUSG00000033653.19	novel	804	10	NA	NA	10282	-13012	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21362143	21365161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21362100_21365200
ES.13375.7	chr16	+	4926	47	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.942753613068	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTGCCAGTCTCTTG	NA	False	NA	14	True	AATAAA	-20	NA	21241907	21463423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13375.8	chr16	+	5455	48	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	34.9152631354673	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241911	21463430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21459764_21460238_21462870
ES.13375.9	chr16	+	4960	47	NNC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	28.4000668946735	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCAGTCTCTTGGTT	NA	False	NA	17	True	AATAAA	-23	NA	21241921	21463426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386726_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ES.13376.1	chr16	+	208	1	Intergenic	novelGene_11220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	21504508	21504716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21504500_21504700
ES.13377.1	chr16	+	229	1	Intergenic	novelGene_11221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCGTGGATTCAAGGGAAA	3451	False	NA	NA	False	NA	NA	NA	21530915	21531144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21530900_21531100
ES.13378.1	chr16	+	183	1	Intergenic	novelGene_11222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAAATCGTTTTA	5208	False	NA	NA	False	NA	NA	NA	21532672	21532855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21532700_21532900
ES.13379.1	chr16	+	174	1	Intergenic	novelGene_11223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCAAAGCCTGAA	5577	False	NA	NA	False	NA	NA	NA	21533041	21533215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21533000_21533200
ES.1338.1	chr1	-	245	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCAGAGGCAGGCC	NA	False	NA	NA	False	AAAAAG	-40	NA	132964021	132963776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_132963800_132964000
ES.13380.1	chr16	-	1990	1	Intergenic	novelGene_11219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTTTGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	21457975	21455985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21456000_21458000
ES.13381.1	chr16	-	2182	2	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	42035	9495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTCCTGGCTGATTAA	NA	False	NA	NA	False	AATAAA	-15	NA	21469946	21458299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21458326_21467790
ES.13381.10	chr16	-	2231	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	54	2879	18	1394	multi-exon	FALSE	canonical	3	80	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTGGGACTTTTAAA	NA	False	NA	NA	False	AATATA	-16	NA	21513361	21470673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13381.11	chr16	-	2092	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	-19	3091	-19	1182	multi-exon	FALSE	canonical	3	80	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTGAGTCAGGAAGATG	NA	False	NA	NA	False	AAAACA	-14	NA	21513434	21470885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13381.12	chr16	-	3430	3	FSM	ENSMUSG00000043391.11	ENSMUST00000232634.2	1695	3	-120	-1615	-35	1612	multi-exon	FALSE	canonical	1	2	junction_1	1	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATATAAAGAGAATTTAAT	NA	False	NA	NA	False	AAAAAG	-12	NA	21513450	21493859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21496745_21508931_21508992_21512965
ES.13381.13	chr16	-	1789	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	-24	42	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCCTTCAGCCTTCTGG	NA	False	NA	45	True	NA	NA	NA	21513439	21495429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21496745_21512965
ES.13381.15	chr16	-	1100	3	NNC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	-355	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCAGGGTCTCCTGTTT	NA	False	NA	0	True	AATAAA	-27	NA	21513770	21495474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21496193_21512965_21513185_21513607
ES.13381.16	chr16	-	3542	1	NIC	ENSMUSG00000043391.11	novel	1135	2	NA	NA	12957	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGATCAAATTCAGGGTC	NA	False	NA	-8	True	AATAAA	-19	NA	21499024	21495482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21495500_21499000
ES.13381.17	chr16	-	651	2	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	-25	-16992	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAGCATTCCACAATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21513440	21512466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21512643_21512965
ES.13381.2	chr16	-	5193	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	-26	-3	-26	3	multi-exon	FALSE	canonical	3	80	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCCGTTGGGGTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	21513441	21467791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13381.3	chr16	-	5158	3	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.5	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACTGCCGTTGGGGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	21513485	21467794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21472264_21472339_21472509_21512965
ES.13381.4	chr16	-	5208	3	NIC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACTGCCGTTGGGGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	21513399	21467794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21472509_21508931_21508992_21512965
ES.13381.5	chr16	-	5192	3	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	-20184	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACTGCCGTTGGGGT	NA	False	NA	NA	False	AATAAA	-22	NA	21533599	21467796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21472509_21532272_21532533_21533379
ES.13381.6	chr16	-	5246	3	NNC	ENSMUSG00000043391.11	novel	5164	2	NA	NA	6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACTGCCGTTGGGGT	NA	False	NA	NA	False	AATAAA	-22	NA	21513373	21467796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21472509_21475711_21475838_21512965
ES.13381.7	chr16	-	4554	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	12	598	12	-598	multi-exon	FALSE	canonical	3	80	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTTGATTGTTCCCA	NA	False	NA	NA	False	AGTAAA	-16	NA	21513403	21468392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13381.8	chr16	-	3949	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	0	1215	0	-1215	multi-exon	FALSE	canonical	3	80	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTGATATCTTTAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	21513415	21469009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13381.9	chr16	-	3276	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	2	1886	2	-1886	multi-exon	FALSE	canonical	3	80	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTAAGCTTCACTTGC	NA	False	NA	NA	False	ATTAAA	-25	NA	21513413	21469680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21472509_21512965
ES.13382.1	chr16	+	194	1	Intergenic	novelGene_11224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAGCCTCCATGA	NA	False	NA	NA	False	NA	NA	NA	21604318	21604512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21604300_21604500
ES.13383.1	chr16	-	3095	8	NNC	ENSMUSG00000022853.8	novel	2981	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.82251294665401	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTGTGTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	21606570	21580036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21599612_21599725_21599858_21599952_21606456
ES.13383.2	chr16	-	3007	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	-26	0	-26	0	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTGTGTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	21606583	21580036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
ES.13383.3	chr16	-	3086	8	NNC	ENSMUSG00000022853.8	novel	2981	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.69043933353987	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTCATTGTGTAAAAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	21606552	21580038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21597159_21597272_21606456
ES.13384.1	chr16	+	177	1	Intergenic	novelGene_11225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAGCAAATAAG	NA	False	NA	NA	False	NA	NA	NA	21608943	21609120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21608900_21609100
ES.13385.1	chr16	+	611	3	FSM	ENSMUSG00000097290.10	ENSMUST00000209449.2	580	3	-20	-11	4	-3	multi-exon	FALSE	canonical	3	94	junction_2	32	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	27	True	AATAAA	-32	NA	21613071	21627787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21627427
ES.13385.10	chr16	+	1636	3	FSM	ENSMUSG00000097290.10	ENSMUST00000181960.3	574	3	-4	-1058	2	1058	multi-exon	FALSE	canonical	3	94	junction_2	32	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGAGGTGTGTATAGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	21613107	21628848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21627427
ES.13385.11	chr16	+	720	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	44	3	0	-3	multi-exon	FALSE	canonical	3	20	junction_2	60.8896999134957	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	27	True	AATAAA	-32	NA	21613111	21627787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
ES.13385.12	chr16	+	7023	5	NNC	ENSMUSG00000097290.10	novel	1650	5	NA	NA	1	8	intron_retention	FALSE	non_canonical	0	0	junction_4	62.8291333697991	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTATTGTATTACCTT	NA	False	NA	NA	False	NA	NA	NA	21613112	21627578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21613197_21614599_21614726_21619524_21619587_21620030_21624445_21625241
ES.13385.13	chr16	+	5681	6	NNC	ENSMUSG00000097290.10	novel	3557	5	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_5	55.9228039354251	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTGGAAAGATGGGTT	NA	False	NA	18	True	AATAAA	-23	NA	21613121	21627778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702_21624450_21625243
ES.13385.14	chr16	+	8690	3	Genic_Genomic	ENSMUSG00000097290.10	novel	767	4	NA	NA	5066	-26	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAATTAAACAGA	NA	False	NA	-10	True	NA	NA	NA	21618207	21627750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_21618832_21618889_21624445_21625239
ES.13385.15	chr16	+	787	2	NNC	ENSMUSG00000097290.10	novel	767	4	NA	NA	13622	-26	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAATTAAACAGA	NA	False	NA	-10	True	NA	NA	NA	21626763	21627750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21627228_21627427
ES.13385.16	chr16	+	1685	1	Genic_Genomic	ENSMUSG00000097290.10	novel	NA	NA	NA	NA	13695	731	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACACTGCCCCAGGCACA	NA	False	NA	NA	False	NA	NA	NA	21626836	21628521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_21626800_21628500
ES.13385.17	chr16	+	5474	1	ISM	ENSMUSG00000033618.8	ENSMUST00000231988.2	8583	15	133620	0	35997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGGTCCTTTCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	21746715	21752189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21746700_21752200
ES.13385.2	chr16	+	3555	5	FSM	ENSMUSG00000097290.10	ENSMUST00000181780.9	1650	5	-18	-1887	-5	0	multi-exon	FALSE	canonical	3	11	junction_2	59.8289227715158	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTAGTTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	21613078	21624875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21619524_21619587_21620030_21620107_21621702
ES.13385.4	chr16	+	873	6	NIC	ENSMUSG00000097290.10	novel	1650	5	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	54.1723176539457	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	27	True	AATAAA	-32	NA	21613096	21627787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21613197_21614599_21614726_21619524_21619587_21620030_21620107_21625720_21625870_21627427
ES.13385.5	chr16	+	933	6	NIC	ENSMUSG00000097290.10	novel	701	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	51.1921869038626	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	False	NA	27	True	AATAAA	-32	NA	21613096	21627787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21625720_21625870_21627427
ES.13385.6	chr16	+	3594	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	-44	7	1	-2	multi-exon	FALSE	canonical	3	16	junction_4	55.9838146253004	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTAGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	21613097	21624873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
ES.13385.7	chr16	+	925	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	-43	2675	2	-783	multi-exon	FALSE	canonical	3	16	junction_4	55.9838146253004	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGTATGTGCTTAACA	NA	False	NA	NA	False	ATTAAA	-21	NA	21613098	21622205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
ES.13385.8	chr16	+	978	7	NIC	ENSMUSG00000097290.10	novel	701	6	NA	NA	3	-26	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	52.8501550507554	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAATTAAACAGA	NA	False	NA	-10	True	NA	NA	NA	21613099	21627750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21613197_21614599_21614726_21619524_21619587_21620030_21620107_21621702_21621848_21625720_21625870_21627427
ES.13385.9	chr16	+	6481	15	FSM	ENSMUSG00000033618.8	ENSMUST00000231988.2	8583	15	8	2094	8	-532	multi-exon	FALSE	canonical	0	0	junction_2	40.3462058504962	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTCTAGTGATTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	21613103	21750095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21613197_21614599_21614726_21710633_21711191_21717238_21717423_21722495_21722688_21723867_21724027_21724510_21724670_21725194_21725304_21727414_21727525_21729755_21729873_21732901_21733040_21740314_21741087_21744167_21744236_21744922_21745221_21746696
ES.13386.1	chr16	+	201	1	Intergenic	novelGene_11226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAATAAAATTT	NA	False	NA	NA	False	AATACA	-9	NA	21788973	21789174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21789000_21789200
ES.13387.1	chr16	+	1338	1	Intergenic	novelGene_11227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21790819	21792157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21790800_21792200
ES.13388.1	chr16	-	1350	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	9	1	9	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	9199	False	NA	-3	True	ATTAAA	-15	NA	21766293	21753076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ES.13388.10	chr16	-	5136	9	NIC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-14	1523	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.6945837571767	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGCCTCTTTTCATCT	NA	False	NA	NA	False	NA	NA	NA	21814215	21771043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.11	chr16	-	5297	9	ISM	ENSMUSG00000044626.14	ENSMUST00000231682.2	2065	10	11110	-3290	-7650	1523	3prime_fragment	FALSE	canonical	0	0	junction_8	61.5629758864855	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGCCTCTTTTCATCT	NA	False	NA	NA	False	NA	NA	NA	21803153	21771043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802591
ES.13388.12	chr16	-	3826	10	FSM	ENSMUSG00000044626.14	ENSMUST00000231682.2	2065	10	6	-1767	6	0	multi-exon	FALSE	canonical	0	0	junction_8	60.1727964457259	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTCTCCATAGACATG	NA	False	NA	NA	False	NA	NA	NA	21814257	21772566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802591_21803019_21814070
ES.13388.13	chr16	-	3830	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	93	0	-57	0	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTCTCCATAGACATG	NA	False	NA	NA	False	NA	NA	NA	21814320	21772566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.14	chr16	-	3605	9	NIC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_7	58.5863411982691	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTCTCCATAGACATG	NA	False	NA	NA	False	NA	NA	NA	21814204	21772566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21802650_21803019_21814070
ES.13388.15	chr16	-	3886	11	NNC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.6438048989866	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTCTCCATAGACATG	NA	False	NA	NA	False	NA	NA	NA	21814259	21772566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21790064_21790182_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.18	chr16	-	3298	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	156	469	6	-469	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTATAGCGTGTGTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	21814257	21773035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.19	chr16	-	3171	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	93	659	-57	-659	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAGGAGAAAGGGTTTA	NA	False	NA	-2	True	NA	NA	NA	21814320	21773225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.21	chr16	-	2806	7	NIC	ENSMUSG00000044626.14	novel	2051	9	NA	NA	7	-659	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	72.2812792729441	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAGGAGAAAGGGTTTA	NA	False	NA	-2	True	NA	NA	NA	21814256	21773225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21802650_21803019_21814070
ES.13388.22	chr16	-	2941	9	FSM	ENSMUSG00000044626.14	ENSMUST00000074230.12	2051	9	14	-904	3	-666	multi-exon	FALSE	canonical	3	14	junction_5	59.399994739057	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACGTGAAGGAGAAA	NA	False	NA	-9	True	NA	NA	NA	21814187	21773232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.25	chr16	-	2547	8	NNC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-4816	-720	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.231405631418	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCACACTGTCTTAGTT	NA	False	NA	-63	True	AAGAAA	-25	NA	21800319	21773286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800155
ES.13388.26	chr16	-	2727	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	107	1089	-43	481	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTTAGAGGAATTAATG	NA	False	NA	-22	True	AATACA	-18	NA	21814306	21773655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.27	chr16	-	5340	7	NNC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-707	479	intron_retention	FALSE	canonical	0	0	junction_5	88.0159392130514	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21796210	21773657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21790064_21790182_21792807
ES.13388.29	chr16	-	2525	9	NIC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-14	479	combination_of_known_splicesites	FALSE	canonical	2	14	junction_7	58.5863411982691	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCTGTTAGAGGAATTAA	NA	False	NA	-24	True	AATACA	-16	NA	21814215	21773657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21802650_21803019_21814070
ES.13388.3	chr16	-	2568	13	Fusion	ENSMUSG00000022856.10_ENSMUSG00000044626.14	novel	1360	5	NA	NA	18	0	multi-exon	FALSE	canonical	1	1	junction_4	49.4045094657923	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	NA	False	NA	-3	True	ATTAAA	-15	NA	21814245	21753076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.30	chr16	-	2424	8	NIC	ENSMUSG00000044626.14	novel	2051	9	NA	NA	-7	475	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	80.2752916468049	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTGCCTGTTAGAGGAA	NA	False	NA	-28	True	AATACA	-12	NA	21814208	21773661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21794982_21795085_21802650_21803019_21814070
ES.13388.32	chr16	-	5085	6	ISM	ENSMUSG00000044626.14	ENSMUST00000231766.2	2118	10	18111	-478	-576	472	intron_retention	FALSE	canonical	3	144	junction_5	24.4981631964521	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCCTGCCTGTTAGAG	NA	False	NA	-31	True	AATACA	-9	NA	21796079	21773664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807
ES.13388.33	chr16	-	2103	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	103	1717	-47	50	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTCCTCCTGGACTGTT	NA	False	NA	NA	False	NA	NA	NA	21814310	21774283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.35	chr16	-	3932	8	NIC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	22	48	intron_retention	FALSE	canonical	0	0	junction_2	68.0057020418441	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTTCCTCCTGGACTG	NA	False	NA	NA	False	NA	NA	NA	21814168	21774285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21784703_21784800_21786734_21786903_21792807_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.37	chr16	-	2105	10	FSM	ENSMUSG00000044626.14	ENSMUST00000231682.2	2065	10	4	-44	4	44	multi-exon	FALSE	canonical	0	0	junction_8	60.1727964457259	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCAGCTTTCCTCCTGG	NA	False	NA	NA	False	NA	NA	NA	21814259	21774289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802591_21803019_21814070
ES.13388.38	chr16	-	3202	6	NNC	ENSMUSG00000044626.14	novel	2051	9	NA	NA	6252	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.9778915211524	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACACCAGCTTTCCTCCT	NA	False	NA	NA	False	NA	NA	NA	21788963	21774291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21788686_21788730
ES.13388.39	chr16	-	1885	9	NIC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.6945837571767	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGGGTTTGGCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	21814256	21774335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21774928_21777530_21777705_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.4	chr16	-	2511	12	Fusion	ENSMUSG00000022856.10_ENSMUSG00000044626.14	novel	1360	5	NA	NA	-15	0	multi-exon	FALSE	canonical	1	1	junction_4	65.2943747339756	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	NA	False	NA	-3	True	ATTAAA	-15	NA	21814278	21753076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.40	chr16	-	4447	7	NNC	ENSMUSG00000044626.14	novel	3923	10	NA	NA	-2698	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.3695818705064	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGGGTTTGGCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	21798201	21774335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786899_21792807_21792898_21794982
ES.13388.41	chr16	-	1724	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	167	2032	17	-265	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGCACTTTGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	21814246	21774598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13388.42	chr16	-	3693	6	ISM	ENSMUSG00000044626.14	ENSMUST00000231682.2	2065	10	17549	1876	-1211	-1876	internal_fragment	FALSE	canonical	3	144	junction_4	15.4609184720702	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTATTCATGGTATCTT	NA	False	NA	NA	False	AATAAA	-35	NA	21796714	21776209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982
ES.13388.43	chr16	-	177	1	Intergenic	novelGene_11228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATTGCAATTCTT	NA	False	NA	NA	False	NA	NA	NA	21806020	21805843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21805800_21806000
ES.13388.44	chr16	-	230	1	Intergenic	novelGene_11229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAAAAAAGGGTACTTT	NA	False	NA	NA	False	AAGAAA	-14	NA	21811057	21810827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_21810800_21811100
ES.13388.5	chr16	-	3291	3	ISM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	7166	0	7166	0	3prime_fragment	FALSE	canonical	3	143	junction_1	11.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	7445	False	NA	-3	True	ATTAAA	-15	NA	21759115	21753076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_21753796_21755730_21755870_21756682
ES.13388.7	chr16	-	4008	4	NNC	ENSMUSG00000022856.10	novel	1184	4	NA	NA	37	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	73.4347783183599	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTTGCAGGTTCTGAA	9248	False	NA	-5	True	ATTAAA	-13	NA	21766244	21753078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21753796_21755730_21755870_21756682_21757592_21764001
ES.13388.8	chr16	-	1222	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	3	135	3	-134	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGCAGCATTTAAGTGCA	9193	False	NA	NA	False	NA	NA	NA	21766299	21753210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ES.13388.9	chr16	-	5289	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	157	-1523	7	1523	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGCCTCTTTTCATCT	NA	False	NA	NA	False	NA	NA	NA	21814256	21771043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ES.13389.1	chr16	+	3340	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-222	1381	-222	7	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCCTCTTTTCTC	1980	False	NA	29	True	AATAAA	-29	NA	21828011	21866638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.10	chr16	+	6238	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	115.814979061432	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2174	False	NA	22	True	AATAAA	-22	NA	21828205	21866631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21852120_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.100	chr16	+	175	1	Intergenic	novelGene_11231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTCATAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	21925168	21925343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21925200_21925300
ES.13389.101	chr16	+	220	1	Intergenic	novelGene_11232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACTCTAACTAAGAT	1921	False	NA	NA	False	NA	NA	NA	21932978	21933198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21933000_21933200
ES.13389.11	chr16	+	4402	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-19	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	151.487159109279	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCTTTCTGCAGCCGA	2183	False	NA	20	True	AGTAAA	-27	NA	21828214	21868004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.12	chr16	+	3118	18	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.469942981765	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2184	False	NA	22	True	AATAAA	-22	NA	21828215	21866631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828292_21828369_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.13	chr16	+	7450	14	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	354	junction_5	46.3612008768708	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2197	False	NA	17	True	AATAAA	-17	NA	21828228	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.14	chr16	+	4513	18	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	147.469942981765	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCAGCCGAGTGCTT	2197	False	NA	26	True	AGTAAA	-33	NA	21828228	21868010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.15	chr16	+	3012	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-5	1492	-5	-104	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCATTGTCAATTTCAG	2197	False	NA	8	True	ATTAAA	-17	NA	21828228	21866527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.17	chr16	+	2989	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-4	-108	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	118.526483723048	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTATGCATTGTCAATT	2198	False	NA	4	True	ATTAAA	-13	NA	21828229	21866523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859376_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.18	chr16	+	3043	15	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	180.654705028625	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2198	False	NA	15	True	AATAAA	-15	NA	21828229	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.19	chr16	+	3019	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	116.378930066064	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2198	False	NA	15	True	AATAAA	-15	NA	21828229	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21865678_21865766
ES.13389.2	chr16	+	3190	16	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-178	-4	combination_of_known_splicesites	TRUE	canonical	1	1	junction_7	119.876714447246	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2024	False	NA	18	True	AATAAA	-18	NA	21828055	21866627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.20	chr16	+	4043	17	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	117.358808121717	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2200	False	NA	15	True	AATAAA	-15	NA	21828231	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21854282_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.21	chr16	+	2335	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-2	-46	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	117.774927695796	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTGAAAAGAATGTTAA	2200	False	NA	NA	False	TATAAA	-16	NA	21828231	21865857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861723_21861805_21862962_21863059_21865382
ES.13389.22	chr16	+	3428	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	152.282972804672	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2200	False	NA	18	True	AATAAA	-18	NA	21828231	21866627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21843950_21844270_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.23	chr16	+	3122	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	115.776657297574	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2202	False	NA	18	True	AATAAA	-18	NA	21828233	21866627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.25	chr16	+	4421	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-162	-1376	7	-12	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTCTGCAGCCGAGTG	2209	False	NA	23	True	AGTAAA	-30	NA	21828240	21868007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.26	chr16	+	3188	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	149.032938000284	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATATTCTGATAATTT	2214	False	NA	16	True	AATAAA	-16	NA	21828245	21866625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21852120_21852216_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.27	chr16	+	3033	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-156	6	13	-6	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATATTCTGATAATTT	2215	False	NA	16	True	AATAAA	-16	NA	21828246	21866625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.28	chr16	+	3088	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	119.137787876056	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCTGATAATTTTTC	2215	False	NA	19	True	AATAAA	-19	NA	21828246	21866628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846725_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.29	chr16	+	2665	15	NNC	ENSMUSG00000022855.10	novel	2239	16	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.981912744086	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2215	False	NA	18	True	AATAAA	-18	NA	21828246	21866627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828305_21828370_21828493_21830243_21830286_21842443_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.3	chr16	+	4548	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	116.378930066064	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGCTTTATGCTTGT	2104	False	NA	35	True	AGTAAA	-42	NA	21828135	21868019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.33	chr16	+	4374	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	13	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	152.40743971887	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	2215	False	NA	8	True	AGTAAA	-15	NA	21828246	21867992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859358_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.34	chr16	+	2997	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	115.71780059697	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2218	False	NA	17	True	AATAAA	-17	NA	21828249	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859282_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.35	chr16	+	3096	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	156.82827989556	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAGAGTATATTCTG	2220	False	NA	9	True	AATAAA	-9	NA	21828251	21866618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837072_21837178_21842389_21842559_21845388_21845490_21846716_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.37	chr16	+	2882	14	NIC	ENSMUSG00000022855.10	novel	2883	16	NA	NA	-10	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	160.313376541775	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2220	False	NA	17	True	AATAAA	-17	NA	21828251	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.38	chr16	+	4519	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.28344481276	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGTGCTTTATGC	2220	False	NA	31	True	AGTAAA	-38	NA	21828251	21868015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832263_21832355_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.39	chr16	+	2836	15	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-9	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.942679951623	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTATGCATTGTCAATTT	2221	False	NA	5	True	ATTAAA	-14	NA	21828252	21866524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833006_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.4	chr16	+	4573	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	-82	8	-82	-8	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCAGCCGAGTGCTTT	2120	False	NA	27	True	AGTAAA	-34	NA	21828151	21868011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.41	chr16	+	7555	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-9	-24	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	115.814979061432	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTGACATCTCTTTC	2221	False	NA	11	True	AGTAAA	-18	NA	21828252	21867995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21852120_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.42	chr16	+	4319	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-7	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.788865656036	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGCTGGTGACATCT	2223	False	NA	6	True	AGTAAA	-13	NA	21828254	21867990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828289_21828369_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.43	chr16	+	2997	15	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	176.58697342577	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2224	False	NA	15	True	AATAAA	-15	NA	21828255	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855224_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.44	chr16	+	2021	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-6	-1881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	119.472783903908	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGTGCATATCTCT	2224	False	NA	NA	False	AATAAA	-17	NA	21828255	21863735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21863554
ES.13389.45	chr16	+	3480	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	149.486618581558	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2224	False	NA	17	True	AATAAA	-17	NA	21828255	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21854282_21854679_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.46	chr16	+	2969	18	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-6	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.469942981765	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATGCATTGTCAATTTC	2224	False	NA	6	True	ATTAAA	-15	NA	21828255	21866525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828289_21828369_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.47	chr16	+	4342	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	116.378930066064	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCAGCCGAGTGCTTT	2224	False	NA	27	True	AGTAAA	-34	NA	21828255	21868011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21865740_21865866
ES.13389.48	chr16	+	3174	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.971309248784	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTCTGATAATTTTT	2226	False	NA	18	True	AATAAA	-18	NA	21828257	21866627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832263_21832355_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.49	chr16	+	2975	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-3	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	173.392426575528	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAGAAAGTTGGTCAG	2227	False	NA	20	True	ATTAAA	-29	NA	21828258	21866539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847294_21847333_21850853_21850915_21855224_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.5	chr16	+	3028	15	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-65	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	118.429863856467	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTGATAATTTTTCCT	2137	False	NA	21	True	AATAAA	-21	NA	21828168	21866630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.50	chr16	+	4340	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-3	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	154.106649353621	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2227	False	NA	9	True	AGTAAA	-16	NA	21828258	21867993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.51	chr16	+	3096	16	NIC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	150.228655352063	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2227	False	NA	17	True	AATAAA	-17	NA	21828258	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.52	chr16	+	4898	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-2	800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	148.788865656036	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTTTTAGATTTTTAAA	2228	False	NA	NA	False	AATAAA	-13	NA	21828259	21868819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704_21868419_21868744
ES.13389.53	chr16	+	4282	16	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	158.113461370835	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGCAGCCGAGTGCT	2228	False	NA	25	True	AGTAAA	-32	NA	21828259	21868009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863055_21865382
ES.13389.55	chr16	+	2071	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	96	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	115.71780059697	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGTTATTTCCATATGA	2230	False	NA	NA	False	NA	NA	NA	21828261	21865712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859282_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.56	chr16	+	3035	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	116.378930066064	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2230	False	NA	15	True	AATAAA	-15	NA	21828261	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21866467_21866507
ES.13389.57	chr16	+	4199	17	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	119.712268977536	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATATTCTGATAATTTT	2230	False	NA	17	True	AATAAA	-17	NA	21828261	21866626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21829122_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.58	chr16	+	6450	16	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	76	intron_retention	FALSE	non_canonical	0	0	junction_7	121.563261994184	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAATGTGTTTTGTTTT	2231	False	NA	NA	False	NA	NA	NA	21828262	21865692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846716_21846814_21847290_21847343_21850853_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.59	chr16	+	4274	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	-25	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_16	118.376781929566	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGGTGACATCTCTTT	2231	False	NA	10	True	AGTAAA	-17	NA	21828262	21867994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865553
ES.13389.60	chr16	+	2089	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	-140	934	1	81	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTTTGTTTTAAAGC	2231	False	NA	NA	False	NA	NA	NA	21828262	21865697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.62	chr16	+	3124	17	NNC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	150.464696856106	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2231	False	NA	15	True	AATAAA	-15	NA	21828262	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859376_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.63	chr16	+	4432	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	171.417051530924	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2231	False	NA	9	True	AGTAAA	-16	NA	21828262	21867993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21856547_21856585_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.64	chr16	+	4302	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	149.893595478252	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2231	False	NA	9	True	AGTAAA	-16	NA	21828262	21867993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859282_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.66	chr16	+	4326	19	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.788865656036	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCAGCCGAGTGCTTT	2231	False	NA	27	True	AGTAAA	-34	NA	21828262	21868011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828283_21828369_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.67	chr16	+	2965	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	4	-108	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	118.157849268468	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTATGCATTGTCAATT	2234	False	NA	4	True	ATTAAA	-13	NA	21828265	21866523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865388
ES.13389.68	chr16	+	4388	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	4	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	152.75364067833	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2234	False	NA	9	True	AGTAAA	-16	NA	21828265	21867993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857423_21859197_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.69	chr16	+	3019	16	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	118.145371847097	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATATTCTGATAATTT	2236	False	NA	16	True	AATAAA	-16	NA	21828267	21866625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.7	chr16	+	2275	14	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-64	-2062	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	121.995828816073	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCATTTGATAGTTCCT	2138	False	NA	NA	False	ATTAAA	-19	NA	21828169	21863554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962
ES.13389.70	chr16	+	4519	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	6	-2390	6	-13	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTCTGCAGCCGAGT	2236	False	NA	22	True	AGTAAA	-29	NA	21828267	21868006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.71	chr16	+	4018	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	152.676895354209	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGTATATTCTGATAAT	2239	False	NA	14	True	AATAAA	-14	NA	21828270	21866623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21854282_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.74	chr16	+	3070	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	11	-11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	153.710564048149	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAGAGTATATTCTGAT	2241	False	NA	11	True	AATAAA	-11	NA	21828272	21866620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865388
ES.13389.76	chr16	+	3023	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	20	-908	-3	-107	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTATGCATTGTCAATTT	2250	False	NA	5	True	ATTAAA	-14	NA	21828281	21866524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.77	chr16	+	2954	16	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	120.1633332871	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2261	False	NA	15	True	AATAAA	-15	NA	21828292	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847313_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.78	chr16	+	7350	16	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	8	-7	intron_retention	FALSE	canonical	3	339	junction_10	49.6248145812377	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2261	False	NA	15	True	AATAAA	-15	NA	21828292	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.79	chr16	+	4360	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	10	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.148170360161	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATACACACTGCTGGTG	2263	False	NA	0	True	AGTAAA	-7	NA	21828294	21867984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837080_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.8	chr16	+	4518	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-61	-36	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	118.157849268468	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATACACACTGCTGGT	2141	False	NA	-1	True	AGTAAA	-6	NA	21828172	21867983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865388
ES.13389.80	chr16	+	3114	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.216973167959	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2263	False	NA	15	True	AATAAA	-15	NA	21828294	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21829122_21829194_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.81	chr16	+	7405	16	NIC	ENSMUSG00000022855.10	novel	2135	17	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	37	junction_2	113.273042786985	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2273	False	NA	15	True	AATAAA	-15	NA	21828304	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.83	chr16	+	4191	16	NNC	ENSMUSG00000022855.10	novel	2239	16	NA	NA	-3	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	161.009399311552	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	2276	False	NA	8	True	AGTAAA	-15	NA	21828307	21867992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.84	chr16	+	2892	15	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	157.000991157667	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAGAGTATATTCTGAT	2278	False	NA	11	True	AATAAA	-11	NA	21828309	21866620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.85	chr16	+	1466	12	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	65118	at_least_one_novel_splicesite	TRUE	canonical	3	354	junction_5	107.193807641553	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	2279	False	NA	NA	False	NA	NA	NA	21828310	21933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855567_21933029
ES.13389.86	chr16	+	4355	18	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	7	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	150.836009394653	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGGTGACATCTCTT	2286	False	NA	9	True	AGTAAA	-16	NA	21828317	21867993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.87	chr16	+	3062	17	NIC	ENSMUSG00000022855.10	novel	3702	9	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	150.261425834277	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2533	False	NA	15	True	AATAAA	-15	NA	21828564	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828715_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.88	chr16	+	3085	17	NNC	ENSMUSG00000022855.10	novel	3702	9	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.712268977536	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	2534	False	NA	15	True	AATAAA	-15	NA	21828565	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21828806_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.89	chr16	+	4313	17	NIC	ENSMUSG00000022855.10	novel	3702	9	NA	NA	62	-27	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	118.178823716434	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	2583	False	NA	8	True	AGTAAA	-15	NA	21828614	21867992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21828715_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.9	chr16	+	3221	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	-73	-1013	-45	-2	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCTGATAATTTTTCC	2157	False	NA	20	True	AATAAA	-20	NA	21828188	21866629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.90	chr16	+	2655	14	ISM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	6544	6	6394	-6	3prime_fragment	FALSE	canonical	3	339	junction_8	55.0358678096578	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTATATTCTGATAATTT	8915	False	NA	16	True	AATAAA	-16	NA	21834946	21866625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.91	chr16	+	4006	16	NNC	ENSMUSG00000022855.10	novel	2883	16	NA	NA	7780	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	201.464791520062	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATATTCTGATAATT	361	False	NA	15	True	AATAAA	-15	NA	21836332	21866624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21852120_21852216_21852958_21853135_21854282_21854679_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.92	chr16	+	3814	13	NNC	ENSMUSG00000022855.10	novel	2883	16	NA	NA	-4920	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	136.225609437678	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	6417	False	NA	8	True	AGTAAA	-15	NA	21842388	21867992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.93	chr16	+	1560	11	ISM	ENSMUSG00000022855.10	ENSMUST00000232679.2	2239	16	17076	46	-1922	-46	3prime_fragment	FALSE	canonical	3	339	junction_5	53.7311827526623	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTGAAAAGAATGTTAA	9415	False	NA	NA	False	TATAAA	-16	NA	21845386	21865857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.94	chr16	+	6528	9	NIC	ENSMUSG00000022855.10	novel	2883	16	NA	NA	-591	-9	intron_retention	FALSE	canonical	3	339	junction_3	53.0565735795292	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGAGTATATTCTGATAA	NA	False	NA	13	True	AATAAA	-13	NA	21846717	21866622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21846814_21847290_21847343_21850853_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.95	chr16	+	3398	9	NNC	ENSMUSG00000022855.10	novel	2883	16	NA	NA	3543	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	157.45669047392	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGGTGACATCTCT	NA	False	NA	8	True	AGTAAA	-15	NA	21850851	21867992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382_21867656_21867704
ES.13389.96	chr16	+	4299	6	NIC	ENSMUSG00000022855.10	novel	3702	9	NA	NA	7513	-12	intron_retention	FALSE	canonical	3	440	junction_1	16.3878003404972	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTAGAGTATATTCTGA	NA	False	NA	10	True	AATAAA	-10	NA	21854821	21866619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ES.13389.98	chr16	+	1569	1	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	37506	711	18431	30	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGGTTTGTTTCTGTTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	21865739	21867308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_21865700_21867300
ES.13389.99	chr16	+	178	1	Intergenic	novelGene_11230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAGAAAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	21887434	21887612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21887400_21887600
ES.1339.1	chr1	+	7954	33	FSM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	-19	-7	-19	7	multi-exon	FALSE	canonical	1	8	junction_4	3.18795952569979	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTATTAAAGATCGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	132973730	133036432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.10	chr1	+	4821	17	ISM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	43890	-4	21323	4	3prime_fragment	FALSE	canonical	2	9	junction_7	3.16227766016838	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATCATTATTAAAGATCG	NA	False	NA	NA	False	AATAAA	-19	NA	133017639	133036429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.11	chr1	+	4384	15	NNC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	22196	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	5.17105365649665	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAACAAAGCTATCATTA	NA	False	NA	NA	False	AATAAA	-9	NA	133018512	133036419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028542_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.12	chr1	+	3586	8	ISM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	53592	3	31025	-3	3prime_fragment	FALSE	canonical	2	16	junction_1	1.8516401995451	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTATCATTATTA	6976	False	NA	NA	False	AATAAA	-12	NA	133027341	133036422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.2	chr1	+	11651	32	NIC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	6	-5	intron_retention	FALSE	canonical	2	8	junction_4	3.16950873795268	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAAAGCTATCATTAT	NA	False	NA	NA	False	AATAAA	-10	NA	132973755	133036420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.3	chr1	+	8196	32	NIC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	9	4	intron_retention	FALSE	canonical	1	9	junction_22	3.00260032986325	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATCATTATTAAAGATCG	NA	False	NA	NA	False	AATAAA	-19	NA	132973758	133036429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.1339.4	chr1	+	5923	32	ISM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	13	2849	13	-2849	5prime_fragment	FALSE	canonical	1	8	junction_4	3.18097884790221	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAGGCACGGGCAGGA	NA	False	NA	NA	False	AATAAA	-14	NA	132973762	133033576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724
ES.1339.5	chr1	+	7860	34	NNC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	4.02083645570041	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAAGCTATCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	132973766	133036421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710_133035175_133035221
ES.1339.6	chr1	+	3756	1	Antisense	novelGene_ENSMUSG00000101102.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAGAAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132974791	132978547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_132974800_132978500
ES.1339.8	chr1	+	5560	24	NNC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	11145	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	4.30281044130018	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTATCATTATTAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	133007461	133036425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710_133035202_133035245
ES.1339.9	chr1	+	4930	19	NNC	ENSMUSG00000026447.18	novel	7928	33	NA	NA	18905	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.66931141987793	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTATCATTATTA	NA	False	NA	NA	False	AATAAA	-12	NA	133015221	133036422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133015300_133016012_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ES.13390.1	chr16	+	4500	1	Intergenic	novelGene_11233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGAACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	21942168	21946668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21942200_21946700
ES.13391.1	chr16	+	4841	1	Intergenic	novelGene_11234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	21982108	21986949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21982100_21986900
ES.13392.1	chr16	-	5303	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-21	931	intron_retention	FALSE	canonical	3	902	junction_2	83.0511276017272	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTGTTTCAGGTGTC	2532	False	NA	NA	False	TATAAA	-21	NA	21981790	21876827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.10	chr16	-	3152	14	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	296.997579333869	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2576	False	NA	NA	False	AATATA	-16	NA	21981746	21877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897495_21900662_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.12	chr16	-	4912	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	902	junction_1	84.4430734463237	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGTGTCTTGGTGTCT	2233	False	NA	NA	False	AATATA	-15	NA	21982089	21877759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.13	chr16	-	4875	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-245	-1	intron_retention	FALSE	canonical	3	902	junction_2	83.0511276017272	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGTGTCTTGGTGTCT	2028	False	NA	NA	False	AATATA	-15	NA	21982294	21877759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.14	chr16	-	3733	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	2	123	junction_12	242.620600023072	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2515	False	NA	NA	False	AATATA	-14	NA	21981807	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906199_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.15	chr16	-	2908	8	NNC	ENSMUSG00000033581.18	novel	3267	14	NA	NA	-211	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	493.963230888077	1122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	NA	False	NA	NA	False	AATATA	-14	NA	21898079	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21894766_21894896_21897365_21897502_21897747
ES.13392.17	chr16	-	3567	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	277.014720828254	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2534	False	NA	NA	False	AATATA	-14	NA	21981788	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898901_21900501_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.18	chr16	-	3601	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-461	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	269.108184274931	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	1812	False	NA	NA	False	AATATA	-14	NA	21982510	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535_21981651_21982407
ES.13392.19	chr16	-	3870	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-84	-2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_11	264.715177124395	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2189	False	NA	NA	False	AATATA	-14	NA	21982133	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900552_21900662_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.2	chr16	-	4397	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	-497	-1	-497	1	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTTGGTGTCTTA	1776	False	NA	NA	False	AATATA	-17	NA	21982546	21877757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.20	chr16	-	3083	12	NNC	ENSMUSG00000033581.18	novel	3267	14	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	307.895522690022	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	2530	False	NA	NA	False	AATATA	-14	NA	21981792	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900607_21981737
ES.13392.21	chr16	-	3503	15	NNC	ENSMUSG00000033581.18	novel	3337	15	NA	NA	95	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	285.092179865405	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGGTGTCTTGGTGTC	NA	False	NA	NA	False	AATATA	-14	NA	21955864	21877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21955683
ES.13392.22	chr16	-	3838	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_15	272.78574416971	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGGTGTCTTGGTGT	2325	False	NA	NA	False	AATATA	-13	NA	21981997	21877761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980051_21981535
ES.13392.24	chr16	-	3462	13	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	298.282584137928	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGGTGTCTTGGTGT	2542	False	NA	NA	False	AATATA	-13	NA	21981780	21877761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21979995_21980057_21981535
ES.13392.25	chr16	-	3578	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	280.002669447916	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGGTGTCTTGGTGT	2522	False	NA	NA	False	AATATA	-13	NA	21981800	21877761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.26	chr16	-	4149	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	183	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	275.169394292962	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATCTTGGTGTCTTGGTG	2780	False	NA	NA	False	AATATA	-12	NA	21981542	21877762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21980774
ES.13392.27	chr16	-	3965	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.492774680711	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGATCTTGGTGTCTTGGT	2302	False	NA	NA	False	AATATA	-11	NA	21982020	21877763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879736_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.28	chr16	-	3479	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-457	-5	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_15	272.547488216885	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGATCTTGGTGTCTTGGT	1816	False	NA	NA	False	AATATA	-11	NA	21982506	21877763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21982407
ES.13392.29	chr16	-	2807	10	NNC	ENSMUSG00000033581.18	novel	3267	14	NA	NA	-1010	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	421.832627273068	1122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCCAAGCTAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	21898878	21877777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889062_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816
ES.13392.30	chr16	-	5304	14	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	2	-19	intron_retention	FALSE	canonical	3	902	junction_1	86.1202544402423	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCCAAGCTAACAAGAT	2555	False	NA	NA	False	NA	NA	NA	21981767	21877777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.31	chr16	-	3438	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-26	18	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_10	273.202602883322	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATATATCCAAGC	2527	False	NA	NA	False	NA	NA	NA	21981795	21877786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900662_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.33	chr16	-	3387	15	NNC	ENSMUSG00000033581.18	novel	3337	15	NA	NA	-449	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	285.092179865405	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATATATCCAAGC	1824	False	NA	NA	False	NA	NA	NA	21982498	21877786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21982407
ES.13392.34	chr16	-	3503	15	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-20	18	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	279.002605868893	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATATATCCAAGC	2533	False	NA	NA	False	NA	NA	NA	21981789	21877786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900658_21906243_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.36	chr16	-	3480	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-228	14	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_15	274.930940823732	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAATATATCC	3894	False	NA	NA	False	NA	NA	NA	21980428	21877790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21980301
ES.13392.37	chr16	-	3830	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	31	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	277.770760800261	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAATATATCC	2304	False	NA	NA	False	NA	NA	NA	21982018	21877790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897371_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.39	chr16	-	3330	15	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-21	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	287.065128072189	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAATATATC	2532	False	NA	NA	False	NA	NA	NA	21981790	21877791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897437_21898905_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.40	chr16	-	2876	11	NNC	ENSMUSG00000033581.18	novel	3267	14	NA	NA	-22	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	319.628909831386	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAATATATC	2531	False	NA	NA	False	NA	NA	NA	21981791	21877791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898855_21981692
ES.13392.41	chr16	-	4261	14	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-5	12	intron_retention	FALSE	canonical	0	0	junction_13	295.772521738218	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAATATAT	2548	False	NA	NA	False	NA	NA	NA	21981774	21877792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21981535
ES.13392.42	chr16	-	3544	1	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	1111	12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	21881336	21877792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21877800_21881300
ES.13392.43	chr16	-	3522	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-459	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	276.123402364474	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAATATA	3663	False	NA	NA	False	NA	NA	NA	21980659	21877793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21980487
ES.13392.44	chr16	-	3615	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	277.770760800261	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAATATA	2579	False	NA	NA	False	NA	NA	NA	21981743	21877793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894953_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.46	chr16	-	3533	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-20	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	277.014720828254	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAATATA	2533	False	NA	NA	False	NA	NA	NA	21981789	21877793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898918_21900520_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.47	chr16	-	4565	15	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-31	11	intron_retention	FALSE	canonical	1	9	junction_1	283.898057659536	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAATATA	2522	False	NA	NA	False	NA	NA	NA	21981800	21877793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21880724_21882355_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.48	chr16	-	3415	14	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-18	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	290.797414181548	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAAATAT	2535	False	NA	NA	False	NA	NA	NA	21981787	21877794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.49	chr16	-	3519	15	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	378.98296364704	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAAAATAT	2555	False	NA	NA	False	NA	NA	NA	21981767	21877794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898947_21900479_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21981535
ES.13392.52	chr16	-	4550	15	NNC	ENSMUSG00000033581.18	novel	4952	15	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_2	286.548532057817	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2529	False	NA	NA	False	NA	NA	NA	21981793	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.53	chr16	-	3728	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	269.108184274931	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2258	False	NA	NA	False	NA	NA	NA	21982064	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535_21981776_21981896
ES.13392.56	chr16	-	3722	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	274.24944039242	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2532	False	NA	NA	False	NA	NA	NA	21981790	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883695_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.58	chr16	-	7137	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-43	0	intron_retention	FALSE	canonical	3	902	junction_2	74.1479491782945	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2510	False	NA	NA	False	NA	NA	NA	21981812	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.6	chr16	-	3887	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	277.347002868248	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2283	False	NA	NA	False	AATATA	-16	NA	21982039	21877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.61	chr16	-	3589	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	370.029944734207	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2510	False	NA	NA	False	NA	NA	NA	21981812	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907855_21979995_21980057_21981535
ES.13392.62	chr16	-	3541	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	277.919124926659	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2521	False	NA	NA	False	NA	NA	NA	21981801	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897469_21898245_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.63	chr16	-	5903	14	NIC	ENSMUSG00000033581.18	novel	4952	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	902	junction_1	87.6304775276044	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2557	False	NA	NA	False	NA	NA	NA	21981765	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21880724_21882331_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.64	chr16	-	1760	3	NNC	ENSMUSG00000033581.18	novel	616	2	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	553.5	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2510	False	NA	NA	False	NA	NA	NA	21981812	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879262_21980011_21980057_21981535
ES.13392.65	chr16	-	3579	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	277.926896863186	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2538	False	NA	NA	False	NA	NA	NA	21981784	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883928_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.66	chr16	-	5113	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-27	0	intron_retention	FALSE	canonical	3	902	junction_2	84.318879673462	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2526	False	NA	NA	False	NA	NA	NA	21981796	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.67	chr16	-	4232	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-482	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	268.876801481645	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1791	False	NA	NA	False	NA	NA	NA	21982531	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535_21982324_21982407
ES.13392.68	chr16	-	3405	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.108184274931	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2526	False	NA	NA	False	NA	NA	NA	21981796	21877823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879297_21879472_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.7	chr16	-	3648	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	272.085248079021	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2515	False	NA	NA	False	AATATA	-16	NA	21981807	21877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902729_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.73	chr16	-	3686	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	354.652272479678	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	2524	False	NA	NA	False	NA	NA	NA	21981798	21877825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21888845_21888951_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.74	chr16	-	3747	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	77	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	277.014720828254	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGACAAAAAAAAAAAAAAAA	2350	False	NA	NA	False	NA	NA	NA	21981972	21877827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900489_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.75	chr16	-	3431	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	242	226	-38	-161	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAACAGAGAATATT	2515	False	NA	NA	False	AAAAAG	-5	NA	21981807	21877984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.76	chr16	-	3615	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	-69	353	-69	98	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTGCCAGCCCCAAG	2204	False	NA	93	True	AATAAA	-22	NA	21982118	21878111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.77	chr16	-	4270	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-30	98	intron_retention	FALSE	canonical	3	902	junction_1	84.4430734463237	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTGCCAGCCCCAAG	2523	False	NA	93	True	AATAAA	-22	NA	21981799	21878111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.78	chr16	-	3471	17	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-26	84	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	359.805589867639	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAAGATGAG	2527	False	NA	79	True	AATAAA	-8	NA	21981795	21878125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21938977_21939171_21979995_21980057_21981535
ES.13392.79	chr16	-	3377	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	50	3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	274.620756680918	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTTGCTCTTGTGTTTC	2323	False	NA	-2	True	AATAAA	-27	NA	21981999	21878206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882355_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.8	chr16	-	3359	14	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	294.907968795642	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2540	False	NA	NA	False	AATATA	-16	NA	21981782	21877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906315_21981683
ES.13392.81	chr16	-	3319	17	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-44	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	354.652272479678	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTTGCTCTTGTGTTT	2509	False	NA	-3	True	AATAAA	-26	NA	21981813	21878207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21888845_21888951_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.82	chr16	-	3172	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	272.085248079021	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTTGCTCTTGTGTTT	2542	False	NA	-3	True	AATAAA	-26	NA	21981780	21878207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902729_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.84	chr16	-	3416	16	NNC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	277.347002868248	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTGCTCTTGTGT	2303	False	NA	-5	True	AATAAA	-24	NA	21982019	21878209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21879636_21880609_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.85	chr16	-	4182	15	NNC	ENSMUSG00000033581.18	novel	4952	15	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_2	286.548532057817	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTGCTCTTGTGT	2511	False	NA	-5	True	AATAAA	-24	NA	21981811	21878209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_21880724_21882331_21882458_21883838_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.86	chr16	-	3396	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	49	454	49	-3	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCACCTTGCTCTTG	2322	False	NA	-8	True	AATAAA	-21	NA	21982000	21878212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.87	chr16	-	2367	15	FSM	ENSMUSG00000033581.18	ENSMUST00000115379.2	3078	15	167	544	167	-544	multi-exon	FALSE	canonical	3	902	junction_2	83.5777775366107	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTTGGTTTGTTTTG	4289	False	NA	NA	False	TTTAAA	-4	NA	21980033	21878753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995
ES.13392.88	chr16	-	2293	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	317	1289	-7	-838	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAACAATTTTTACTCAG	2590	False	NA	NA	False	AATATA	-31	NA	21981732	21879047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13392.89	chr16	-	2540	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	-70	1429	-70	928	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTTGTGGAAAGTT	2203	False	NA	NA	False	NA	NA	NA	21982119	21879187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ES.13393.1	chr16	+	134	1	Intergenic	novelGene_11235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9557	False	NA	NA	False	NA	NA	NA	21991915	21992049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_21991900_21992000
ES.13394.1	chr16	-	246	1	Intergenic	novelGene_11236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCGGGGTTTCTAACCT	NA	False	NA	NA	False	NA	NA	NA	22006207	22005961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22006000_22006200
ES.13395.1	chr16	+	236	1	Intergenic	novelGene_11237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCCACAGCTCTAACT	NA	False	NA	NA	False	NA	NA	NA	22035348	22035584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22035300_22035600
ES.13396.1	chr16	+	215	1	Intergenic	novelGene_11238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCAAGAGAGAGTTTGT	NA	False	NA	NA	False	AAAAAG	-17	NA	22035790	22036005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22035800_22036000
ES.13397.1	chr16	+	2439	1	FSM	ENSMUSG00000098043.2	ENSMUST00000183321.2	395	1	-810	-1234	-810	1234	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCTCGTCTCCTCAT	1177	False	NA	NA	False	NA	NA	NA	22054860	22057299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22054900_22057300
ES.13398.1	chr16	-	4984	1	Intergenic	novelGene_11239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAATCATCAAA	6864	False	NA	NA	False	NA	NA	NA	22062394	22057410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22057400_22062400
ES.13399.1	chr16	+	494	1	Intergenic	novelGene_11240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGCGGCACCACCGC	NA	False	NA	NA	False	NA	NA	NA	22070680	22071174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22070700_22071200
ES.13399.2	chr16	+	5922	1	Antisense	novelGene_ENSMUSG00000022858.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTCAAGTATCTTATTA	NA	False	NA	NA	False	NA	NA	NA	22070682	22076604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_22070700_22076600
ES.13399.3	chr16	+	9176	1	Antisense	novelGene_ENSMUSG00000022858.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGGAGACAGGGACATA	NA	False	NA	NA	False	NA	NA	NA	22070682	22079858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_22070700_22079900
ES.13399.4	chr16	+	175	1	Intergenic	novelGene_11241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	22071704	22071879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22071700_22071900
ES.134.1	chr1	-	2910	1	FSM	ENSMUSG00000025930.7	ENSMUST00000190471.2	1226	1	-263	-1421	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	4	True	AATAAA	-21	NA	14826479	14823569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14823600_14826500
ES.134.2	chr1	-	1736	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	-1	6	1	-6	multi-exon	FALSE	canonical	3	23	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAACATGCATTGTAAAA	NA	False	NA	-2	True	AATAAA	-15	NA	14826215	14823575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14824550_14825453
ES.134.3	chr1	-	1773	3	FSM	ENSMUSG00000025930.7	ENSMUST00000190719.2	741	3	-638	-394	1	-6	multi-exon	FALSE	canonical	1	2	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAACATGCATTGTAAAA	NA	False	NA	-2	True	AATAAA	-15	NA	14826215	14823575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14824550_14824729_14824767_14825453
ES.134.4	chr1	-	1225	1	FSM	ENSMUSG00000025930.7	ENSMUST00000190471.2	1226	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAGAAAACACTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	14826215	14824990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14825000_14826200
ES.1340.1	chr1	-	2025	5	NNC	ENSMUSG00000101102.2	novel	463	4	NA	NA	9	3432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGGTCCCAGCTCGTC	NA	False	NA	NA	False	AATAAA	-20	NA	132996134	132974433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_132976074_132988777_132988866_132989875_132989973_132993571_132993641_132996003
ES.13400.1	chr16	+	793	1	Intergenic	novelGene_11242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACGGTCG	NA	False	NA	NA	False	NA	NA	NA	22083492	22084285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22083500_22084300
ES.13401.1	chr16	-	3383	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	53	-33	-26	33	multi-exon	TRUE	canonical	3	1235	junction_5	313.549014310363	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTACTTTTATTTAT	NA	False	NA	NA	False	AATGAA	-22	NA	22084702	22063265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ES.13401.13	chr16	-	2512	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	690	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATTGGCCAAGTAGA	NA	False	NA	-18	True	ATTAAA	-11	NA	22084676	22064507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
ES.13401.16	chr16	-	2091	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	60	1252	-19	647	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATATTGTTCTTGCTTCA	NA	False	NA	2	True	ATTAAA	-27	NA	22084695	22064550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ES.13401.17	chr16	-	2450	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-108	-655	-29	641	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGCAATATTGTTCTT	NA	False	NA	-4	True	ATTAAA	-21	NA	22084784	22064556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.2	chr16	-	3594	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	2	-1909	2	-4	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTACATAATGAATACG	NA	False	NA	NA	False	AATAAA	-18	NA	22084674	22063302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.20	chr16	-	4218	8	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	582	intron_retention	FALSE	canonical	3	442	junction_6	715.352745867665	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084676	22064615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.21	chr16	-	2406	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-2	582	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084678	22064615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
ES.13401.22	chr16	-	6153	9	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-2	582	intron_retention	FALSE	canonical	3	646	junction_8	531.987297193269	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084678	22064615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22078012_22084490
ES.13401.23	chr16	-	3703	9	NNC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-1894	582	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	714.721438306561	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	224	False	NA	-23	True	AATAAA	-35	NA	22075891	22064615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22074009
ES.13401.24	chr16	-	2300	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	2	582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	798.254036114343	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084674	22064615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073340_22073733_22073868_22077735_22078012_22084490
ES.13401.3	chr16	-	3239	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	2	-1554	2	-359	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGTGCATGTTTACA	NA	False	NA	NA	False	AATAAA	-16	NA	22084674	22063657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.31	chr16	-	2335	11	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	866.488205343847	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGTTTTTACAAAGAAG	NA	False	NA	-36	True	AATAAA	-22	NA	22084676	22064628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22076913_22076979_22077735_22078012_22084490
ES.13401.33	chr16	-	3514	6	NIC	ENSMUSG00000022858.17	novel	1369	8	NA	NA	-1722	567	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	832.78583081126	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTTTTTACAAAGA	396	False	NA	-38	True	AATAAA	-20	NA	22075719	22064630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22069614_22069731_22071356_22071546_22073157_22073321_22073733
ES.13401.34	chr16	-	2380	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	3	567	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_7	844.465350618403	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTTTTTACAAAGA	NA	False	NA	-38	True	AATAAA	-20	NA	22084673	22064630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073315_22073733_22073868_22077614_22078012_22084490
ES.13401.35	chr16	-	2241	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-2	567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	838.947886078483	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTTTTTACAAAGA	NA	False	NA	-38	True	AATAAA	-20	NA	22084678	22064630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069735_22071389_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.36	chr16	-	2211	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	552	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	758.69763329368	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATTGCTGATGCAAC	NA	False	NA	-53	True	AATAAA	-5	NA	22084676	22064645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077777_22078012_22084490
ES.13401.37	chr16	-	1492	6	NIC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	-2	551	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	841.591017062326	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTGCTGATGCAA	NA	False	NA	-54	True	AATAAA	-4	NA	22084678	22064646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22084490
ES.13401.39	chr16	-	5656	9	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	-2	85	intron_retention	FALSE	canonical	3	646	junction_8	531.987297193269	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATATTCAATATACC	NA	False	NA	79	True	AATAAA	-23	NA	22084678	22065112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22078012_22084490
ES.13401.4	chr16	-	2468	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-3	-778	-3	764	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGGTATTTTGCAAAG	NA	False	NA	56	True	ATTAAA	-14	NA	22084679	22064433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.40	chr16	-	1522	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	61	1820	-18	79	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTTGCCATATTCAA	NA	False	NA	73	True	AATAAA	-17	NA	22084694	22065118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ES.13401.42	chr16	-	1782	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	-2	-93	-2	79	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTTGCCATATTCAA	NA	False	NA	73	True	AATAAA	-17	NA	22084678	22065118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ES.13401.45	chr16	-	1807	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTTTCTAAATATCA	NA	False	NA	-19	True	AATAAA	-15	NA	22084674	22065210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
ES.13401.46	chr16	-	3345	7	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1235	junction_4	354.942914032978	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTTCTTTCTAAATAT	NA	False	NA	-21	True	AATAAA	-13	NA	22084676	22065212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22073321_22073733_22073868_22084490
ES.13401.47	chr16	-	1232	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	81	2090	2	-177	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATGTTTTGCATGTA	NA	False	NA	NA	False	NA	NA	NA	22084674	22065388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ES.13401.48	chr16	-	7651	2	NNC	ENSMUSG00000022858.17	novel	1376	2	NA	NA	-2117	2059	intron_retention	FALSE	non_canonical	0	0	junction_1	0	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTCTGCCCGGCGGTGG	NA	False	NA	NA	False	TATAAA	-45	NA	22080489	22071207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22077511_22079141
ES.13401.49	chr16	-	1285	3	ISM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	81	9055	2	913	5prime_fragment	FALSE	canonical	3	1686	junction_2	293	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTCAAGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	22084674	22072353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22073321_22073733_22073868_22084490
ES.13401.5	chr16	-	2206	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	58	1139	-21	760	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTCTGGGTATTTTGC	NA	False	NA	52	True	ATTAAA	-10	NA	22084697	22064437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ES.13401.6	chr16	-	6273	9	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	2	706	intron_retention	FALSE	canonical	3	646	junction_8	531.987297193269	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACTGGAATGAATGTTT	NA	False	NA	-2	True	ATTAAA	-27	NA	22084674	22064491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22078012_22084490
ES.13401.7	chr16	-	3740	8	NIC	ENSMUSG00000022858.17	novel	3403	9	NA	NA	2	705	intron_retention	FALSE	canonical	3	1235	junction_5	335.190959889787	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACTGGAATGAATGTT	NA	False	NA	-3	True	ATTAAA	-26	NA	22084674	22064492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22073321_22073733_22073868_22084490
ES.13401.8	chr16	-	7450	8	FSM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	-5384	-697	-1009	697	multi-exon	FALSE	canonical	3	1235	junction_5	318.920244652138	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCAAGTAGAACTGGAA	NA	False	NA	-11	True	ATTAAA	-18	NA	22079381	22064500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733
ES.13402.1	chr16	-	174	1	Intergenic	novelGene_11243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTACATTTCTG	NA	False	NA	NA	False	NA	NA	NA	22090981	22090807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22090800_22091000
ES.13403.1	chr16	-	217	1	Intergenic	novelGene_11244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTATGAATCTCATA	8272	False	NA	NA	False	NA	NA	NA	22113045	22112828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22112800_22113000
ES.13404.1	chr16	+	174	1	Intergenic	novelGene_11245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGATAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	22113107	22113281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22113100_22113300
ES.13405.1	chr16	+	475	1	FSM	ENSMUSG00000082241.5	ENSMUST00000120931.2	205	1	-23	-247	-23	247	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCCAGGAGAGGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	22113753	22114228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22113800_22114200
ES.13406.1	chr16	+	176	1	Intergenic	novelGene_11246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	22181503	22181679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22181500_22181700
ES.13407.1	chr16	+	179	1	Intergenic	novelGene_11247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22189328	22189507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22189300_22189500
ES.13408.1	chr16	+	4596	2	Antisense	novelGene_ENSMUSG00000013089.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCAAGCAAATAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	22245918	22252506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_22250032_22252023
ES.13408.2	chr16	+	2190	2	Antisense	novelGene_ENSMUSG00000013089.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCAAGCAAATAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	22245918	22252506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_22246532_22250929
ES.13409.1	chr16	-	4087	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	-99	-13	-99	13	multi-exon	TRUE	canonical	3	174	junction_9	424.638105724549	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTCTTGCACTCGGTG	7387	False	NA	0	True	AATAAA	-35	NA	22258568	22200045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ES.13409.11	chr16	-	2631	3	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-9950	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	561.5	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	NA	False	NA	-14	True	AATAAA	-21	NA	22230529	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22230382
ES.13409.12	chr16	-	3784	12	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	1	18	junction_3	441.027275631836	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	7607	False	NA	-14	True	AATAAA	-21	NA	22258348	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ES.13409.13	chr16	-	4442	13	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-1228	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	443.483394089715	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	6258	False	NA	-14	True	AATAAA	-21	NA	22259697	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22259026
ES.13409.14	chr16	-	4894	13	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	1176	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	444.275127470455	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	8811	False	NA	-14	True	AATAAA	-21	NA	22257144	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22256021
ES.13409.15	chr16	-	3867	13	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-130	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	444.275127470455	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	7356	False	NA	-14	True	AATAAA	-21	NA	22258599	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258503
ES.13409.16	chr16	-	6251	6	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-9948	-3	intron_retention	FALSE	canonical	3	940	junction_3	54.3116930319798	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCCTGCAACCTGCCTC	NA	False	NA	-16	True	AATAAA	-19	NA	22230527	22200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
ES.13409.17	chr16	-	3273	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-8480	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	392.741928271253	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCCTGCAACCTGCCTC	NA	False	NA	-16	True	AATAAA	-19	NA	22229059	22200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22228827
ES.13409.18	chr16	-	3519	9	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	16334	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	396.999685138414	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCCTGCAACCTGCCTC	7943	False	NA	-16	True	AATAAA	-19	NA	22238930	22200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22238870
ES.13409.19	chr16	-	3525	9	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-11560	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	396.999685138414	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCCTGCAACCTGCCTC	NA	False	NA	-16	True	AATAAA	-19	NA	22232139	22200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22232073
ES.13409.20	chr16	-	3275	8	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	311	3	intron_retention	FALSE	canonical	0	0	junction_6	437.119700600489	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCCTGCAACCTGCCT	6806	False	NA	-17	True	AATAAA	-18	NA	22254953	22200062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22254626_22254678_22254769
ES.13409.21	chr16	-	3861	13	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	434.927029320245	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	7549	False	NA	-18	True	AATAAA	-17	NA	22258406	22200063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220636_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ES.13409.22	chr16	-	3092	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-9776	2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_6	387.589846214899	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	NA	False	NA	-18	True	AATAAA	-17	NA	22230355	22200063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230302
ES.13409.23	chr16	-	3316	6	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-9918	2	intron_retention	FALSE	canonical	3	940	junction_3	62.9081870665496	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	NA	False	NA	-18	True	AATAAA	-17	NA	22230497	22200063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211806_22218069_22218130_22220421_22220682_22230382
ES.13409.25	chr16	-	3230	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-838	2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	376.188080914617	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	NA	False	NA	-18	True	AATAAA	-17	NA	22221417	22200063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22221226
ES.13409.26	chr16	-	4347	2	ISM	ENSMUSG00000013089.16	ENSMUST00000170803.2	433	4	13104	-2265	13104	2	3prime_fragment	FALSE	canonical	3	1126	junction_1	0	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	NA	False	NA	-18	True	AATAAA	-17	NA	22207475	22200063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22202442_22205506
ES.13409.28	chr16	-	3139	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-6542	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	391.63776489109	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCATTCCTGCAACCTGC	NA	False	NA	-19	True	AATAAA	-16	NA	22227121	22200064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22227020
ES.13409.29	chr16	-	3617	9	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-11431	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	396.999685138414	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCATTCCTGCAACCTGC	NA	False	NA	-19	True	AATAAA	-16	NA	22232010	22200064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22231849
ES.13409.30	chr16	-	4006	14	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	1176	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	456.338177829095	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCATTCCTGCAACCTGC	8811	False	NA	-19	True	AATAAA	-16	NA	22257144	22200064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22256021_22256096_22256978
ES.13409.31	chr16	-	3917	14	NIC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	454.891846174425	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	7591	False	NA	-20	True	AATAAA	-15	NA	22258364	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22240568_22240623_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ES.13409.32	chr16	-	3133	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-4378	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	392.741928271253	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22224957	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22224861
ES.13409.33	chr16	-	3126	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-9185	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	392.741928271253	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22229764	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22229675
ES.13409.34	chr16	-	3093	6	NIC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-9961	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	406.247215375072	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22230540	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
ES.13409.35	chr16	-	3316	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-5852	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	391.269727937135	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22226431	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22226152
ES.13409.37	chr16	-	3108	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-8186	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	392.741928271253	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22228765	22200065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22228694
ES.13409.38	chr16	-	2496	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	105	1374	2	896	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAACAAA	7591	False	NA	NA	False	TATAAA	-30	NA	22258364	22201432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ES.13409.39	chr16	-	1887	7	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	24550	1482	-10135	781	3prime_fragment	FALSE	canonical	3	940	junction_4	61.8456860976486	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTATTTTGTTTTGCTTT	NA	False	NA	NA	False	AAAAAG	-13	NA	22230714	22201547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382
ES.13409.40	chr16	-	1567	8	ISM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	23638	1790	-11047	473	3prime_fragment	FALSE	canonical	3	304	junction_7	264.973159980788	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTGACTTGCACAATT	NA	False	NA	NA	False	ACTAAA	-16	NA	22231626	22201855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594
ES.13409.41	chr16	-	1300	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-833	468	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	376.188080914617	977	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGGCTTTGACTTGCA	NA	False	NA	NA	False	ACTAAA	-11	NA	22221412	22201860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22221354
ES.13409.7	chr16	-	3774	11	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	436.265240421467	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	7588	False	NA	-13	True	AATAAA	-22	NA	22258367	22200058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254950_22255039_22255187_22255311_22258266
ES.13409.8	chr16	-	3116	7	NNC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	-848	-1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	376.188080914617	1026	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGCAACCTGCCTCTT	NA	False	NA	-14	True	AATAAA	-21	NA	22221427	22200059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22221354
ES.1341.1	chr1	-	3328	1	Antisense	novelGene_ENSMUSG00000026447.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGCAGTCCTTGAAGC	5457	False	NA	NA	False	NA	NA	NA	133025126	133021798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_133021800_133025100
ES.13410.1	chr16	+	3696	1	Genic_Genomic	ENSMUSG00000089663.2	novel	NA	NA	NA	NA	-228	871	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATATTAATTCATGGAT	NA	False	NA	NA	False	NA	NA	NA	22367074	22370770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_22367100_22370800
ES.13411.1	chr16	-	3448	8	NNC	ENSMUSG00000022861.18	novel	2725	24	NA	NA	108044	1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.451753951452626	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGGTGCACCTTGTCGC	NA	False	NA	NA	False	AATAAA	-18	NA	22367734	22285317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22288098_22298115_22298177_22300650_22300772_22318973_22319152_22338294_22338386_22343025_22343092_22367401_22367467_22367648
ES.13412.1	chr16	+	176	1	Intergenic	novelGene_11248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTACTCC	NA	False	NA	NA	False	NA	NA	NA	22387465	22387641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22387500_22387600
ES.13413.1	chr16	-	176	1	Intergenic	novelGene_11249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	22457286	22457110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22457100_22457300
ES.13414.1	chr16	+	176	1	Intergenic	novelGene_11250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22577056	22577232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22577100_22577200
ES.13415.1	chr16	-	3347	9	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	48.0670105165695	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGCCAGAGTTGGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	22676295	22631962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22633557_22633635_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.10	chr16	-	6259	7	NNC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	-27	-55	intron_retention	FALSE	canonical	1	2	junction_2	40.0610645001963	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTTTTTCTCCTTTGGT	NA	False	NA	NA	False	AATAAA	-10	NA	22676446	22632024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22640100_22640135_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.11	chr16	-	2569	9	NIC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	-26	-60	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	44.9803776662669	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676320	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22642116_22642198_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.12	chr16	-	3397	9	NNC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	0	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.9631306048663	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676290	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22657801_22658001_22660478_22660858_22675504
ES.13415.13	chr16	-	5598	6	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	9	-60	intron_retention	FALSE	canonical	3	51	junction_5	28.8721318921897	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676281	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22637130_22637279_22640831_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.14	chr16	-	2534	9	NIC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	1	-60	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	45.5108160221282	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676289	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22633557_22633635_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.15	chr16	-	2117	3	FSM	ENSMUSG00000004462.8	ENSMUST00000231229.2	580	3	-1218	-319	-1218	-60	multi-exon	FALSE	canonical	1	2	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22638493	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22632707_22633557_22633635_22637130
ES.13415.16	chr16	-	2680	9	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	9	-60	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	44.8718661858408	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676281	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22642116_22642198_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.17	chr16	-	2719	10	NNC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	-27	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.4064171807688	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTTTTTCTCCT	NA	False	NA	NA	False	AATAAA	-5	NA	22676446	22632029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22637279_22640157_22640210_22640655_22640709_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.18	chr16	-	2657	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	125	4445	0	-246	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTTGCCTTCATGTCT	NA	False	NA	NA	False	AAGAAA	-23	NA	22676294	22636408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.19	chr16	-	2605	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-3	-256	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	39.6978169005131	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTGAGTGGTTTGC	NA	False	NA	NA	False	AAGAAA	-13	NA	22676297	22636418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652739_22660478_22660858_22676094
ES.13415.2	chr16	-	9189	6	NNC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_2	43.0376579288418	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGCCAGAGTTGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	22676289	22631963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22640100_22640135_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.20	chr16	-	3380	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-25	-263	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGAGTCTGAGT	NA	False	NA	NA	False	AAGAAA	-6	NA	22676444	22636425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.21	chr16	-	2484	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	129	4456	2	-263	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGAGTCTGAGT	NA	False	NA	NA	False	AAGAAA	-6	NA	22676288	22636425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.22	chr16	-	3280	8	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	27	-263	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	50.5229792131405	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGAGTCTGAGT	NA	False	NA	NA	False	AAGAAA	-6	NA	22676263	22636425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22642116_22642198_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.23	chr16	-	2521	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	121	4585	-4	-386	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTATTACTGAACACTA	NA	False	NA	NA	False	AATAAA	-25	NA	22676298	22636548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.24	chr16	-	2473	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-28	4624	-26	-431	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGAGCATTATTAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	22676445	22636593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.25	chr16	-	2326	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	32	-433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.6037765074465	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAGCATTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	22663361	22636595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22663305
ES.13415.26	chr16	-	2515	8	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-1	-433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.1195037624507	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAGCATTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	22676295	22636595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504_22675549_22676094
ES.13415.27	chr16	-	3083	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	-26	-436	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACATAGAGCATTATT	NA	False	NA	NA	False	AATAAA	-15	NA	22676320	22636598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.28	chr16	-	2407	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	10	-437	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	39.6978169005131	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCACATAGAGCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	22676280	22636599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652739_22660478_22660858_22676094
ES.13415.29	chr16	-	2273	7	NNC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	32	-441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.0374006923967	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGTCACATAGAGCA	NA	False	NA	NA	False	AATAAA	-10	NA	22663361	22636603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652739_22660478_22660858_22663305
ES.13415.3	chr16	-	3337	8	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	32.3772406836301	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGCCAGAGTTGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	22676363	22631963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.30	chr16	-	2017	7	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	97	4955	-26	289	5prime_fragment	FALSE	canonical	3	49	junction_6	23.3410701458942	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCCTTGCAATTTGTG	NA	False	NA	NA	False	AATATA	-14	NA	22676320	22636924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.31	chr16	-	1968	1	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	601	2155	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	22644057	22642089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22642100_22644100
ES.13415.32	chr16	-	1319	4	ISM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	6	12296	6	-21	5prime_fragment	FALSE	canonical	3	49	junction_3	31.4783876475414	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGGAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	22676411	22644265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.33	chr16	-	1941	4	FSM	ENSMUSG00000004462.8	ENSMUST00000232251.2	790	4	-679	-472	0	-22	multi-exon	FALSE	canonical	3	22	junction_3	44.1688678696759	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGGAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	22676294	22644266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22644883_22652627_22652784_22660478_22660858_22675504
ES.13415.34	chr16	-	1982	1	Genic_Genomic	ENSMUSG00000004462.8	novel	NA	NA	NA	NA	-26	-13985	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	22676445	22674463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_22674500_22676400
ES.13415.35	chr16	-	370	1	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-1	-15447	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTTGCTCTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	22676295	22675925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22675900_22676300
ES.13415.4	chr16	-	2678	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	-28	-5	-26	-1	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGCCAGAGTTGGT	NA	False	NA	NA	False	AATAAA	-20	NA	22676445	22631964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ES.13415.5	chr16	-	2668	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	129	6	0	0	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676290	22631969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.6	chr16	-	2736	9	NIC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	45.3856736757316	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676281	22631969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22633557_22633635_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.7	chr16	-	2562	9	NNC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	32	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.353128006113	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTTGGTTTCACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	22663361	22632016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22642116_22642198_22644515_22644883_22652627_22652784_22660478_22660858_22663305
ES.13415.8	chr16	-	6445	6	NNC	ENSMUSG00000004462.8	novel	2803	8	NA	NA	-26	-51	intron_retention	FALSE	canonical	1	1	junction_2	43.347894989261	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCCTTTGGTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	22676445	22632020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22632707_22637130_22637279_22640157_22644883_22652627_22652784_22660478_22660858_22676094
ES.13415.9	chr16	-	5473	6	NIC	ENSMUSG00000004462.8	novel	2645	8	NA	NA	-3	-51	intron_retention	FALSE	canonical	3	49	junction_5	29.418361613115	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCCTTTGGTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	22676297	22632020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22632707_22637130_22637279_22640831_22644883_22652627_22652784_22660478_22660858_22676244
ES.13416.1	chr16	+	1693	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	-39	273	-39	-191	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTTTCTTTTTCCTG	NA	False	NA	33	True	AATACA	-26	NA	22676555	22690865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.10	chr16	+	6301	9	NIC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	18	-19	intron_retention	FALSE	canonical	3	939	junction_2	60.8161933616368	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGTTTAGAAGGTAC	NA	False	NA	11	True	AATAAA	-15	NA	22676633	22691119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.13	chr16	+	1439	11	NNC	ENSMUSG00000004460.18	novel	1628	11	NA	NA	21	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	424.056847604186	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTCACTGTCTTTGA	NA	False	NA	-3	True	ATTAAA	-8	NA	22676636	22691048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687464_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420_22690514_22690865
ES.13416.14	chr16	+	7822	6	NNC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	21	-201	intron_retention	FALSE	non_canonical	0	0	junction_4	406.385235952292	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTGACTCCTGTTT	NA	False	NA	23	True	AATACA	-16	NA	22676636	22690855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22681449_22684203_22684302_22685669_22685803_22687460_22688237_22688281_22689850_22690420
ES.13416.15	chr16	+	1685	9	NIC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	44	-20	intron_retention	FALSE	canonical	0	0	junction_1	344.560567063325	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACTGTTTAGAAGGTA	NA	False	NA	10	True	AATAAA	-14	NA	22676659	22691118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22676860_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.16	chr16	+	2395	8	ISM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	6437	282	-5145	-200	3prime_fragment	FALSE	canonical	3	939	junction_1	64.8665820695661	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTGACTCCTGTTTC	NA	False	NA	24	True	AATACA	-17	NA	22683031	22690856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.2	chr16	+	2018	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	-20	-71	-20	-6	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCAGGTGGCTTTGTCT	NA	False	NA	101	True	NA	NA	NA	22676574	22691209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.3	chr16	+	6076	9	NIC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	-10	-190	intron_retention	FALSE	canonical	3	939	junction_2	60.8161933616368	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTTTTCCTGT	NA	False	NA	34	True	AATACA	-27	NA	22676605	22690866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.4	chr16	+	1750	11	NNC	ENSMUSG00000004460.18	novel	1628	11	NA	NA	-9	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	319.452359515468	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACTGTTTAGAAGGTA	NA	False	NA	10	True	AATAAA	-14	NA	22676606	22691118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420_22690514_22690658
ES.13416.5	chr16	+	3566	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	12	-1651	-9	1574	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAAGCTCCACAACCTGA	NA	False	NA	NA	False	AATAAA	-31	NA	22676606	22692789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.6	chr16	+	8067	8	NIC	ENSMUSG00000004460.18	novel	1927	10	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	939	junction_2	63.2610400141625	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCAGGTGGCTTTGTC	NA	False	NA	100	True	NA	NA	NA	22676614	22691208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22681449_22684203_22684302_22685669_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.8	chr16	+	1290	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	38	599	17	-517	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGTTTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	22676632	22690539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13416.9	chr16	+	1822	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	38	67	17	15	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATATTTTCCCGTTTTCT	NA	False	NA	20	True	ATTAAA	-31	NA	22676632	22691071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ES.13417.1	chr16	+	1327	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1779	5	-573	-5	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGGTCATGTTCCT	NA	False	NA	17	True	AATAAA	-42	NA	22712935	22718188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ES.13417.3	chr16	+	2094	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	-811	-524	805	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAAAAGCACGGG	NA	False	NA	NA	False	AATAAA	-9	NA	22712984	22719004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ES.13417.4	chr16	+	1100	5	ISM	ENSMUSG00000022868.7	ENSMUST00000231932.2	848	6	2283	-538	-431	-5	3prime_fragment	FALSE	canonical	3	13	junction_1	40.6540280907071	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGGTCATGTTCCT	NA	False	NA	17	True	AATAAA	-42	NA	22713077	22718188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22713186_22713943_22714108_22715257_22715360_22716877_22716962_22717546
ES.13417.5	chr16	+	1660	4	ISM	ENSMUSG00000022868.7	ENSMUST00000231932.2	848	6	2481	-538	-233	-5	3prime_fragment	FALSE	canonical	3	93	junction_2	10.8730042868667	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGGTCATGTTCCT	NA	False	NA	17	True	AATAAA	-42	NA	22713275	22718188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22714108_22715257_22715360_22716877_22716962_22717546
ES.13417.6	chr16	+	3191	1	NIC	ENSMUSG00000022868.7	novel	1370	7	NA	NA	-107	-369	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAAGTGATAGCTTA	NA	False	NA	NA	False	NA	NA	NA	22713401	22716592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22713400_22716600
ES.13417.7	chr16	+	2958	1	NIC	ENSMUSG00000022868.7	novel	1370	7	NA	NA	179	-211	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	22713792	22716750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22713800_22716800
ES.13418.13	chr16	+	1649	1	Genic_Genomic	ENSMUSG00000022871.14	novel	NA	NA	NA	NA	-71	-19493	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAACCAAGAGCTCCCTTC	NA	False	NA	NA	False	NA	NA	NA	22737012	22738661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_22737000_22738700
ES.13418.14	chr16	+	1285	7	NIC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	163.643582893501	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22737110	22758507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22737341_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.15	chr16	+	4114	7	NIC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-42	2904	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	163.643582893501	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	22737206	22761432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22737341_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.16	chr16	+	1473	8	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.287810813487	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22737321	22758507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22737505_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.17	chr16	+	1501	9	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	86	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	223.10199461233	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGACTGAAACTGG	NA	False	NA	23	True	AATAAA	-29	NA	22737334	22758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22737505_22738069_22738102_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.18	chr16	+	1401	7	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	506	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	171.362594777533	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCAACCTGTTGA	NA	False	NA	13	True	AATAAA	-19	NA	22737754	22758506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22738102_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.19	chr16	+	1483	8	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	668	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	207.736685764082	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGACTGAAACTGG	NA	False	NA	23	True	AATAAA	-29	NA	22737916	22758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22738102_22747824_22748059_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.2	chr16	+	1511	9	NNC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-384	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	192.651847577437	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCTGTTGACTGAAACT	NA	False	NA	21	True	AATAAA	-27	NA	22736699	22758514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22736792_22737218_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.20	chr16	+	1704	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-155	-5	-155	0	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22738831	22758507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.21	chr16	+	4588	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	-119	-2925	-119	2899	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	22738867	22761427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.22	chr16	+	1151	6	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	9947	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	187.111731326499	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAACCTGTTGAC	NA	False	NA	14	True	AATAAA	-20	NA	22750441	22758507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22750649_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.23	chr16	+	647	2	ISM	ENSMUSG00000022871.14	ENSMUST00000167399.2	1421	8	16057	-9	16057	9	3prime_fragment	FALSE	canonical	3	505	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGACTGAAACTGG	NA	False	NA	23	True	AATAAA	-29	NA	22756551	22758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22756708_22758025
ES.13418.4	chr16	+	4684	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-266	-2898	-218	2898	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAAGACCCGTTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	22736865	22761426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.5	chr16	+	1742	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	-234	12	-186	9	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGACTGAAACTGG	NA	False	NA	23	True	AATAAA	-29	NA	22736897	22758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.7	chr16	+	3056	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	-171	-1313	-171	1313	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTTCATTGGTATT	NA	False	NA	NA	False	NA	NA	NA	22736912	22759841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13418.9	chr16	+	1638	8	NNC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-94	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	163.600059877241	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTTCAACCTGTTGA	NA	False	NA	13	True	AATAAA	-19	NA	22736989	22758506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22737341_22747824_22748064_22748388_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ES.13419.1	chr16	-	299	2	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	7318	15787	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAATA	NA	False	NA	NA	False	TTTAAA	-35	NA	22705818	22677945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22678205_22705778
ES.13419.2	chr16	-	1443	4	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	-17	10402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.37704215656966	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAAGTCAATTTTACT	NA	False	NA	NA	False	AATAAA	-18	NA	22713153	22683330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22683591_22684245_22685250_22705778_22705854_22713049
ES.13419.3	chr16	-	2357	4	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	-18	10401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCAAGTCAATTTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	22713154	22683331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22685250_22695029_22695289_22705778_22705854_22713049
ES.13419.4	chr16	-	2555	3	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	45	10401	intron_retention	FALSE	canonical	0	0	junction_1	7	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCAAGTCAATTTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	22713091	22683331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22685770_22705778_22705854_22713049
ES.13419.5	chr16	-	683	4	NNC	ENSMUSG00000116831.2	novel	1769	4	NA	NA	-3	10401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCAAGTCAATTTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	22713139	22683331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22683591_22695029_22695289_22705778_22705854_22713049
ES.1342.1	chr1	+	175	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAATAAATAAATAAACC	NA	False	NA	NA	False	NA	NA	NA	133037234	133037409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133037200_133037400
ES.13420.1	chr16	-	4206	3	Antisense	novelGene_ENSMUSG00000022868.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTATGGGTCTCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	22736531	22715703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22719769_22736090_22736195_22736494
ES.13420.2	chr16	-	4308	3	Antisense	novelGene_ENSMUSG00000022868.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	2	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGTGTATGGGTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	22736774	22715705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22719769_22736090_22736195_22736633
ES.13420.3	chr16	-	3757	4	Antisense	novelGene_ENSMUSG00000022871.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAATGTCTGGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22738831	22729582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22733015_22736090_22736195_22737202_22737324_22738731
ES.13420.4	chr16	-	2624	3	Antisense	novelGene_ENSMUSG00000022871.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAATGTCTGGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22737338	22729582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22731967_22736090_22736195_22737202
ES.13420.5	chr16	-	2679	3	Intergenic	novelGene_11251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22736846	22729604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22731967_22736090_22736195_22736633
ES.13420.6	chr16	-	2200	3	Antisense	novelGene_ENSMUSG00000022871.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGGCTAGATATGGCTC	NA	False	NA	NA	False	NA	NA	NA	22737456	22729941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22731967_22736090_22736195_22737385
ES.13420.7	chr16	-	2514	3	Intergenic	novelGene_11252	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTATGGCTAGATATGGC	NA	False	NA	NA	False	NA	NA	NA	22736881	22729943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22731967_22736090_22736195_22736494
ES.13421.1	chr16	-	1488	1	Antisense	novelGene_ENSMUSG00000022871.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGTCATAGGCCGGGCA	NA	False	NA	NA	False	NA	NA	NA	22755046	22753558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22753600_22755000
ES.13422.1	chr16	-	2527	1	Antisense	novelGene_ENSMUSG00000022871.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACTAGATTGAATCTA	NA	False	NA	NA	False	AATAAA	-11	NA	22758419	22755892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_22755900_22758400
ES.13423.1	chr16	-	5067	6	NNC	ENSMUSG00000060459.15	novel	1577	11	NA	NA	-12212	-4	intron_retention	FALSE	canonical	1	3	junction_5	3.37045990927054	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGGTCTCCTTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	22830921	22804607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22804819_22806994_22807076_22815772_22815860_22815960_22816069_22818563_22822790_22830567
ES.13424.1	chr16	-	178	1	Intergenic	novelGene_11253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGTGAA	NA	False	NA	NA	False	NA	NA	NA	22835530	22835352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22835400_22835500
ES.13425.1	chr16	+	2284	10	FSM	ENSMUSG00000022875.19	ENSMUST00000023589.15	2255	10	-31	2	-31	-2	multi-exon	FALSE	canonical	0	0	junction_3	1.61780219761789	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCTCTGAGCCTGCCTC	5345	False	NA	NA	False	AATAAA	-16	NA	22877062	22898754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22877389_22879132_22879244_22880360_22880443_22886444_22886618_22887967_22888076_22892107_22892193_22893382_22893556_22896023_22896132_22896233_22896321_22897723
ES.13425.2	chr16	+	180	1	Intergenic	novelGene_11254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1037	False	NA	NA	False	NA	NA	NA	22880012	22880192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22880000_22880200
ES.13425.3	chr16	+	5296	4	NNC	ENSMUSG00000022875.19	novel	1995	11	NA	NA	14384	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	2.35702260395516	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCTCTGAGCCTGCCTC	136	False	NA	NA	False	AATAAA	-16	NA	22891526	22898754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22891627_22892107_22893802_22893849_22896321_22897723
ES.13425.4	chr16	+	177	1	Intergenic	novelGene_11255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGGGAAATTT	17	True	NA	NA	False	NA	NA	NA	22892816	22892993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22892800_22893000
ES.13426.1	chr16	-	187	1	Intergenic	novelGene_11256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	4032	False	NA	NA	False	NA	NA	NA	22906968	22906781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_22906800_22907000
ES.13427.1	chr16	+	176	1	Intergenic	novelGene_11257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	22915070	22915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22915100_22915200
ES.13428.1	chr16	+	2161	10	FSM	ENSMUSG00000022884.17	ENSMUST00000168891.8	2203	10	-125	167	-90	3	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTCTGGCCATTTATT	5649	False	NA	NA	False	AATAAA	-21	NA	22926103	22932700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.10	chr16	+	2146	11	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	5771	False	NA	NA	False	AATAAA	-17	NA	22926225	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.100	chr16	+	1768	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	709.130594460569	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928861_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.101	chr16	+	2432	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	110	junction_6	728.347777078368	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22930252_22930343_22930566_22930647_22931100
ES.13428.102	chr16	+	2502	9	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	380	junction_8	767.766393100792	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATAGGTGGTCTGGCC	6053	False	NA	NA	False	AATAAA	-14	NA	22926507	22932693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.105	chr16	+	2808	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	575.869071491081	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566_22930647_22931100
ES.13428.106	chr16	+	4507	5	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	749.633035224569	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.107	chr16	+	4028	7	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	639.654181743716	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566_22930647_22931100
ES.13428.108	chr16	+	3571	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-115	intron_retention	FALSE	canonical	3	675	junction_8	453.831587017695	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTGGACCCTGTTG	6053	False	NA	13	True	NA	NA	NA	22926507	22932565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.109	chr16	+	4157	8	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	441	junction_1	560.371997435814	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGGTGGTCTGGCCA	6053	False	NA	NA	False	AATAAA	-15	NA	22926507	22932694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.110	chr16	+	1908	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	1211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	589.2896269771	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACCACCATAATAATTAG	6053	False	NA	NA	False	NA	NA	NA	22926507	22934097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916_22932693_22934078
ES.13428.111	chr16	+	4396	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	441	junction_1	576.904310378535	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGGTGGTCTGGCCA	6053	False	NA	NA	False	AATAAA	-15	NA	22926507	22932694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566
ES.13428.112	chr16	+	3261	8	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	695.029671955061	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.113	chr16	+	3703	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_8	453.831587017695	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.114	chr16	+	5338	3	FSM	ENSMUSG00000065208.3_ENSMUSG00000022884.17_ENSMUSG00000087935.3	ENSMUST00000149328.8	545	3	-19	-4774	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	276.5	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468
ES.13428.115	chr16	+	4013	8	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1315	junction_2	268.949505920152	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGGTGGTCTGGCCA	6053	False	NA	NA	False	AATAAA	-15	NA	22926507	22932694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.116	chr16	+	4955	6	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_5	528.421422730003	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.117	chr16	+	3740	6	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	600.424316629498	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22930014_22930252_22930343_22930566
ES.13428.119	chr16	+	3326	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1315	junction_3	275.082844664242	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6054	False	NA	NA	False	AATAAA	-16	NA	22926508	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.12	chr16	+	1953	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	125	130	90	-113	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGACCCTGTTGCT	5864	False	NA	15	True	NA	NA	NA	22926318	22932567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.120	chr16	+	3222	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	636.704497615613	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926631_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.121	chr16	+	4471	6	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1632	junction_1	209.740220272603	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.122	chr16	+	4954	5	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	-117	intron_retention	FALSE	canonical	3	1869	junction_4	121.990522172831	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6054	False	NA	11	True	NA	NA	NA	22926508	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.124	chr16	+	1115	8	ISM	ENSMUSG00000022884.17	ENSMUST00000232287.2	1001	9	0	125	0	-125	5prime_fragment	FALSE	canonical	3	441	junction_1	544.83980045814	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTAAATGTATGCCTGA	6054	False	NA	NA	False	NA	NA	NA	22926508	22930183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875
ES.13428.126	chr16	+	2950	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	573.818872786032	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566_22930647_22931100
ES.13428.127	chr16	+	2581	8	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_7	733.939051020073	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.128	chr16	+	4188	7	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_6	483.105722268831	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.129	chr16	+	3803	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	264.52043630784	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22930343_22930566
ES.13428.13	chr16	+	2605	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-32	0	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6017	False	NA	NA	False	AATAAA	-17	NA	22926471	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.130	chr16	+	1942	10	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	380	junction_9	692.768056601135	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6054	False	NA	NA	False	AATAAA	-16	NA	22926508	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.131	chr16	+	3110	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_9	448.081589792653	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.132	chr16	+	5827	2	Fusion	ENSMUSG00000022884.17_ENSMUSG00000088524.3_ENSMUSG00000064880.3	novel	770	4	NA	NA	1	-120	intron_retention	FALSE	canonical	3	1869	junction_1	0	1488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGAACTGGACCC	6055	False	NA	8	True	NA	NA	NA	22926509	22932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_22930343_22930566
ES.13428.133	chr16	+	3248	8	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-18	1	1	0	intron_retention	FALSE	canonical	3	441	junction_1	698.88082543683	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6055	False	NA	NA	False	AATAAA	-17	NA	22926509	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252
ES.13428.135	chr16	+	5270	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	675	junction_3	652.452978297202	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6055	False	NA	NA	False	AATAAA	-17	NA	22926509	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.137	chr16	+	2109	11	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	607.856200099991	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6055	False	NA	NA	False	AATAAA	-17	NA	22926509	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931698
ES.13428.138	chr16	+	2339	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	1	-117	intron_retention	FALSE	canonical	3	441	junction_1	718.314384900898	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6055	False	NA	11	True	NA	NA	NA	22926509	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.139	chr16	+	4872	5	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1632	junction_1	234.495735568901	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6055	False	NA	NA	False	AATAAA	-17	NA	22926509	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22930014_22930252_22930343_22930566
ES.13428.14	chr16	+	3179	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-16	-1	-11	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6038	False	NA	NA	False	AATAAA	-18	NA	22926492	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.140	chr16	+	3399	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	441	junction_1	542.263081907666	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6055	False	NA	NA	False	AATAAA	-16	NA	22926509	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.141	chr16	+	4745	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	441	junction_1	625.351101382255	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6055	False	NA	NA	False	AATAAA	-17	NA	22926509	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22930343_22930566_22930647_22931100
ES.13428.142	chr16	+	3417	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	563	junction_1	616.318993736861	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6057	False	NA	NA	False	AATAAA	-17	NA	22926511	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.143	chr16	+	2783	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	441	junction_1	604.198356767864	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATAGGTGGTCTGGCC	6059	False	NA	NA	False	AATAAA	-14	NA	22926513	22932693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.144	chr16	+	4230	7	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1632	junction_1	192.068564146592	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6059	False	NA	NA	False	AATAAA	-17	NA	22926513	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.145	chr16	+	4587	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	563	junction_1	704.241593646827	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6059	False	NA	NA	False	AATAAA	-17	NA	22926513	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927602_22928734_22930014_22930252_22930343_22930566
ES.13428.148	chr16	+	2703	9	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	380	junction_8	732.816825680197	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6061	False	NA	NA	False	AATAAA	-17	NA	22926515	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.149	chr16	+	3777	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	441	junction_1	677.10400732435	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6061	False	NA	NA	False	AATAAA	-17	NA	22926515	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.15	chr16	+	5968	2	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	1869	junction_1	0	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6051	False	NA	NA	False	AATAAA	-18	NA	22926505	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22930343_22930566
ES.13428.150	chr16	+	2622	11	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	25	junction_7	655.439249663918	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGGTGGTCTGGCCA	6061	False	NA	NA	False	AATAAA	-15	NA	22926515	22932694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929952_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.154	chr16	+	4837	5	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	24	0	intron_retention	FALSE	canonical	3	1632	junction_1	112.389946169575	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6098	False	NA	NA	False	AATAAA	-17	NA	22926552	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22928904_22928983_22929094_22929329_22930343_22930566
ES.13428.155	chr16	+	1959	11	NIC	ENSMUSG00000022884.17	novel	583	6	NA	NA	65	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	618.026730813482	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6139	False	NA	NA	False	AATAAA	-16	NA	22926593	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926721_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.156	chr16	+	2526	9	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	65	-117	intron_retention	FALSE	canonical	3	1278	junction_8	307.025217816062	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6139	False	NA	11	True	NA	NA	NA	22926593	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.157	chr16	+	4136	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	40	-118	intron_retention	FALSE	canonical	3	675	junction_7	481.06085999633	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGAACTGGACCCTG	6252	False	NA	10	True	NA	NA	NA	22926706	22932562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.158	chr16	+	2489	11	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	591.685296420318	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6335	False	NA	NA	False	AATAAA	-17	NA	22926789	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.159	chr16	+	4672	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	170	0	intron_retention	FALSE	canonical	3	1315	junction_1	362.150060978411	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6382	False	NA	NA	False	AATAAA	-17	NA	22926836	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22928010_22928734_22930014_22930252_22930343_22930566
ES.13428.160	chr16	+	2027	11	NNC	ENSMUSG00000022884.17	novel	1655	5	NA	NA	-270	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	614.63599796953	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6607	False	NA	NA	False	AATAAA	-17	NA	22927061	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927259_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.161	chr16	+	1838	10	NNC	ENSMUSG00000022884.17	novel	1655	5	NA	NA	-221	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	725.522255489021	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6656	False	NA	NA	False	AATAAA	-17	NA	22927110	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927259_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.162	chr16	+	4821	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-177	0	intron_retention	FALSE	canonical	3	1850	junction_1	141.596453188473	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6700	False	NA	NA	False	AATAAA	-17	NA	22927154	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22928904_22928983_22929474_22929875_22930014_22930252
ES.13428.163	chr16	+	4987	3	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-85	0	intron_retention	FALSE	canonical	3	1869	junction_2	161.5	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6792	False	NA	NA	False	AATAAA	-17	NA	22927246	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22930014_22930252_22930343_22930566
ES.13428.164	chr16	+	2000	9	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	31	0	intron_retention	FALSE	canonical	3	380	junction_8	731.551166614475	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6908	False	NA	NA	False	AATAAA	-17	NA	22927362	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930647_22931100_22931212_22931916
ES.13428.165	chr16	+	3528	7	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	68	-118	intron_retention	FALSE	canonical	3	675	junction_6	492.611972606793	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGAACTGGACCCTG	6945	False	NA	10	True	NA	NA	NA	22927399	22932562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.166	chr16	+	1897	10	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	135	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_9	587.745871849853	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	7012	False	NA	NA	False	AATAAA	-17	NA	22927466	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.167	chr16	+	4839	2	FSM	ENSMUSG00000065208.3_ENSMUSG00000022884.17_ENSMUSG00000088524.3	ENSMUST00000156227.2	516	2	-1172	-3151	-80	0	multi-exon	FALSE	canonical	3	1929	junction_1	0	1488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	7168	False	NA	NA	False	AATAAA	-18	NA	22927622	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22929094_22929329
ES.13428.168	chr16	+	4346	4	Fusion	ENSMUSG00000022884.17_ENSMUSG00000088524.3	novel	1655	5	NA	NA	-52	-1	intron_retention	FALSE	canonical	3	1869	junction_3	140.276710667008	1488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	7196	False	NA	NA	False	AATAAA	-16	NA	22927650	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_22929094_22929329_22930014_22930252_22930343_22930566
ES.13428.169	chr16	+	3085	7	ISM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	1179	-16	-275	0	intron_retention	FALSE	canonical	3	1315	junction_1	265.932113308808	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	7251	False	NA	NA	False	AATAAA	-17	NA	22927705	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.170	chr16	+	1812	8	ISM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	1514	2	-273	-1	3prime_fragment	FALSE	canonical	3	1278	junction_7	318.260450395135	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	7253	False	NA	NA	False	AATAAA	-16	NA	22927707	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.171	chr16	+	4260	2	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	675	junction_1	0	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	7528	False	NA	NA	False	AATAAA	-17	NA	22927982	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22930647_22931100
ES.13428.172	chr16	+	3780	3	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	80	0	intron_retention	FALSE	canonical	3	675	junction_2	648	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	7606	False	NA	NA	False	AATAAA	-17	NA	22928060	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22929474_22929875_22930647_22931100
ES.13428.173	chr16	+	3792	2	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-60	0	intron_retention	FALSE	canonical	3	2192	junction_1	0	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	8211	False	NA	NA	False	AATAAA	-17	NA	22928665	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22930014_22930252
ES.13428.176	chr16	+	1430	5	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	2604	1	149	0	3prime_fragment	FALSE	canonical	3	1278	junction_4	338.05509905931	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	-16	True	NA	NA	False	AATAAA	-17	NA	22929131	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.177	chr16	+	1431	5	ISM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	2978	119	56	-119	3prime_fragment	FALSE	canonical	3	179	junction_4	828.610998901173	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGAACTGGACCCT	315	False	NA	9	True	NA	NA	NA	22929504	22932561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ES.13428.178	chr16	+	1090	4	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	3346	1	425	0	3prime_fragment	FALSE	canonical	3	1278	junction_3	378.448000244273	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	228	False	NA	NA	False	AATAAA	-17	NA	22929873	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.179	chr16	+	1264	4	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	601	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_3	643.754784232492	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	404	False	NA	NA	False	AATAAA	-17	NA	22930049	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.180	chr16	+	148	1	FSM	ENSMUSG00000065208.3	ENSMUST00000083274.3	139	1	1	-10	1	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAGCTTTTTGAATTA	722	False	NA	9	True	NA	NA	NA	22930367	22930515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22930400_22930500
ES.13428.181	chr16	+	175	1	Intergenic	novelGene_11258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAAAAAAAAAAACT	4259	False	NA	NA	False	NA	NA	NA	22933904	22934079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22933900_22934100
ES.13428.19	chr16	+	4244	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	577.875034549474	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.2	chr16	+	3806	10	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	-90	0	intron_retention	FALSE	canonical	2	44	junction_2	700.492437019121	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	5649	False	NA	NA	False	AATAAA	-17	NA	22926103	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927384_22927468_22927602_22927943_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.20	chr16	+	2461	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_10	630.787610848533	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22931212_22931916
ES.13428.23	chr16	+	2583	10	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	813.938587788635	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929864_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.24	chr16	+	3207	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	626.98208157191	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.26	chr16	+	3251	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	517.997345553044	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.27	chr16	+	3666	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	696.054216438793	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22930343_22930566
ES.13428.28	chr16	+	3103	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	521.17203082503	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.29	chr16	+	1878	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_9	800.56822944706	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931082_22931208_22931916
ES.13428.3	chr16	+	2285	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	-76	-1	-76	1	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTGGTCTGGCCATTTA	5663	False	NA	NA	False	AATAAA	-19	NA	22926117	22932698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.31	chr16	+	3030	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	133	0	-117	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6053	False	NA	11	True	NA	NA	NA	22926507	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.32	chr16	+	2730	10	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-110	intron_retention	FALSE	canonical	3	380	junction_9	587.745871849853	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGACCCTGTTGCTAAG	6053	False	NA	18	True	NA	NA	NA	22926507	22932570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.34	chr16	+	4324	6	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	629.232421288032	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.35	chr16	+	6190	1	FSM	ENSMUSG00000087935.3	ENSMUST00000157310.3	178	1	-2998	-3014	-2998	3014	mono-exon	FALSE	NA	NA	NA	NA	NA	1489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926500_22932700
ES.13428.36	chr16	+	2672	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-117	intron_retention	FALSE	canonical	3	563	junction_3	601.546223805785	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6053	False	NA	11	True	NA	NA	NA	22926507	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.37	chr16	+	1627	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	316	0	-110	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGACCCTGTTGCTAAG	6053	False	NA	18	True	NA	NA	NA	22926507	22932570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.38	chr16	+	2000	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	-19	-16	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ES.13428.39	chr16	+	2406	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_10	578.512886632614	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.4	chr16	+	2259	12	NNC	ENSMUSG00000022884.17	novel	1965	12	NA	NA	-74	-117	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	564.272309855287	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	5665	False	NA	11	True	NA	NA	NA	22926119	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.41	chr16	+	1727	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-121	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGTGTGAACTGGACC	6053	False	NA	7	True	NA	NA	NA	22926507	22932559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.42	chr16	+	1856	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	737.350283108374	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931204_22931916
ES.13428.44	chr16	+	2587	10	NNC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	19	junction_9	718.437725507298	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931082
ES.13428.46	chr16	+	1999	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	718.308872535789	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931204_22931916
ES.13428.48	chr16	+	3888	6	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	781.737398363415	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22930014_22930252
ES.13428.49	chr16	+	3211	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-120	intron_retention	FALSE	canonical	3	675	junction_8	466.590408575873	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGAACTGGACCC	6053	False	NA	8	True	NA	NA	NA	22926507	22932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.5	chr16	+	3341	9	ISM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	-334	0	0	0	intron_retention	FALSE	canonical	3	441	junction_1	660.216063118734	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	5739	False	NA	NA	False	AATAAA	-18	NA	22926193	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.50	chr16	+	4512	6	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-118	intron_retention	FALSE	canonical	3	441	junction_1	619.847529639346	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGAACTGGACCCTG	6053	False	NA	10	True	NA	NA	NA	22926507	22932562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566
ES.13428.51	chr16	+	4336	6	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-120	intron_retention	FALSE	canonical	3	1632	junction_1	209.740220272603	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGAACTGGACCC	6053	False	NA	8	True	NA	NA	NA	22926507	22932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.53	chr16	+	2744	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-117	intron_retention	FALSE	canonical	3	441	junction_1	597.784124391908	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6053	False	NA	11	True	NA	NA	NA	22926507	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.54	chr16	+	5423	2	FSM	ENSMUSG00000065208.3_ENSMUSG00000022884.17_ENSMUSG00000087935.3	ENSMUST00000134816.2	776	2	0	-4647	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	0	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337
ES.13428.55	chr16	+	3113	8	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	324	0	-118	intron_retention	FALSE	canonical	3	563	junction_3	520.662137306421	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGAACTGGACCCTG	6053	False	NA	10	True	NA	NA	NA	22926507	22932562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252
ES.13428.56	chr16	+	3565	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	285.603281449986	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566
ES.13428.57	chr16	+	2805	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	601.546223805785	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.58	chr16	+	1090	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	58	combination_of_known_junctions	FALSE	canonical	3	563	junction_3	575.550128674544	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGATTTTCTTTTGTC	6053	False	NA	6	True	AATAAA	-17	NA	22926507	22931217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.59	chr16	+	1885	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	609.220165457448	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929084_22929327_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.6	chr16	+	5102	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	2	-117	intron_retention	FALSE	canonical	3	1850	junction_2	139.421025036478	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	5741	False	NA	11	True	NA	NA	NA	22926195	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.60	chr16	+	2024	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_10	748.292535715989	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931082_22931212_22931916
ES.13428.61	chr16	+	2971	9	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	598.610983339765	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.62	chr16	+	1755	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_7	571.736536060681	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22930252_22930343_22930566_22930647_22931916
ES.13428.63	chr16	+	2763	6	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	58	intron_retention	FALSE	canonical	3	675	junction_5	565.892922733621	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGATTTTCTTTTGTC	6053	False	NA	6	True	AATAAA	-17	NA	22926507	22931217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22929474_22929875_22930014_22930252_22930647_22931100
ES.13428.64	chr16	+	1924	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	709.5452698736	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22931100_22931212_22931916
ES.13428.65	chr16	+	2581	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	128	0	-112	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGACCCTGTTGCTA	6053	False	NA	16	True	NA	NA	NA	22926507	22932568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.66	chr16	+	2719	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	774.291854886263	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926721_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.67	chr16	+	4708	7	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_6	491.565441557208	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566_22930647_22931100
ES.13428.68	chr16	+	3349	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	616.893224148231	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.71	chr16	+	3883	7	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	604.443660640832	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22930014_22930252_22930343_22930566
ES.13428.72	chr16	+	2892	9	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	321	0	-115	intron_retention	FALSE	canonical	3	563	junction_3	488.360122629807	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAACTGGACCCTGTTG	6053	False	NA	13	True	NA	NA	NA	22926507	22932565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.73	chr16	+	5203	3	FSM	ENSMUSG00000065208.3_ENSMUSG00000022884.17_ENSMUSG00000087935.3	ENSMUST00000149328.8	545	3	-19	-4639	0	-118	multi-exon	FALSE	canonical	3	1632	junction_1	276.5	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGAACTGGACCCTG	6053	False	NA	10	True	NA	NA	NA	22926507	22932562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468
ES.13428.74	chr16	+	3343	7	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	530.192968015734	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930343_22930566
ES.13428.75	chr16	+	3507	7	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	441	junction_1	737.382853219562	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22929094_22929329_22930014_22930252_22930343_22930566
ES.13428.76	chr16	+	2945	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_9	450.777846246537	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.78	chr16	+	1845	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	586.586702883725	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927516_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.8	chr16	+	4222	9	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1315	junction_3	280.466129862413	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	5762	False	NA	NA	False	AATAAA	-18	NA	22926216	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.80	chr16	+	3018	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	6	intron_retention	FALSE	canonical	3	675	junction_8	445.6016824194	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTTTATATAGGTGG	6053	False	NA	NA	False	AATAAA	-7	NA	22926507	22932686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930343_22930566_22930647_22931100
ES.13428.81	chr16	+	3984	5	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	771.847620971912	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22930343_22930566
ES.13428.82	chr16	+	1914	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	706.189981520554	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930566_22930647_22931100_22931212_22931916
ES.13428.83	chr16	+	1953	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	614.375422685511	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926631_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ES.13428.84	chr16	+	1929	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_3	719.859364134573	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927943_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.85	chr16	+	3262	8	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	493.986821273439	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930343_22930566
ES.13428.87	chr16	+	5137	6	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1545	junction_2	238.594216191424	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22927602_22927869_22929094_22929329_22930014_22930252_22930343_22930566
ES.13428.89	chr16	+	5198	3	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1632	junction_1	118.5	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22930343_22930566
ES.13428.9	chr16	+	2992	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-284	0	-4	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	5770	False	NA	NA	False	AATAAA	-17	NA	22926224	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.90	chr16	+	4556	5	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1632	junction_1	201.287108380045	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22929474_22929875_22930014_22930252_22930343_22930566
ES.13428.91	chr16	+	2087	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_10	675.136104796655	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.92	chr16	+	2651	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	563	junction_3	605.920580604422	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTGGTCTGGCCATTTA	6053	False	NA	NA	False	AATAAA	-19	NA	22926507	22932698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.93	chr16	+	2619	10	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_8	661.980884435514	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930566_22930647_22931100
ES.13428.94	chr16	+	5175	5	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_4	626.929970172108	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22929094_22929329_22930014_22930252_22930647_22931100
ES.13428.95	chr16	+	5612	4	NIC	ENSMUSG00000022884.17	novel	2708	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1545	junction_2	261.285709946453	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22927384_22927468_22927602_22927869_22930343_22930566
ES.13428.96	chr16	+	2436	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-117	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGAACTGGACCCTGT	6053	False	NA	11	True	NA	NA	NA	22926507	22932563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ES.13428.97	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_7	678.580577381935	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGGTGGTCTGGCCAT	6053	False	NA	NA	False	AATAAA	-16	NA	22926507	22932695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13428.98	chr16	+	4960	4	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1632	junction_1	229.515915691168	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_22926571_22927337_22930014_22930252_22930343_22930566
ES.13428.99	chr16	+	2100	10	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_9	687.611647500083	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6053	False	NA	NA	False	AATAAA	-17	NA	22926507	22932696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
ES.13429.1	chr16	-	1472	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	22	-266	2	266	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATAATTGGCTGATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	22946465	22932426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.11	chr16	-	2157	5	ISM	ENSMUSG00000022881.16	ENSMUST00000133847.9	862	7	5793	-756	5793	0	3prime_fragment	FALSE	canonical	3	1488	junction_1	79.3819878813828	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22940648	22932700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658
ES.13429.12	chr16	-	1567	10	NNC	ENSMUSG00000022881.16	novel	1279	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	511.931419017995	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946467	22932700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22932858_22932936_22933054_22933194_22933686_22934041_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.14	chr16	-	1322	10	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	18	junction_1	506.881752592369	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAAGTGAATATACAA	NA	False	NA	-35	True	AATAAA	-14	NA	22946440	22932701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22932858_22932929_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149
ES.13429.15	chr16	-	1191	11	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	486.513966911537	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAAGTGAATATACAA	NA	False	NA	-35	True	AATAAA	-14	NA	22946460	22932701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22932858_22932936_22933054_22933194_22933266_22933347_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.2	chr16	-	1555	10	FSM	ENSMUSG00000022881.16	ENSMUST00000115338.8	1279	10	-12	-264	-1	256	multi-exon	FALSE	canonical	2	1237	junction_9	172.55065457732	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCAGTTTAACATAATT	NA	False	NA	NA	False	AATAAA	-7	NA	22946479	22932436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.3	chr16	-	1382	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-2	-152	-2	152	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATACAATACCAACAA	NA	False	NA	NA	False	NA	NA	NA	22946489	22932540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.5	chr16	-	1271	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	-28	-15	-28	15	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACATTCAAACTTCAT	NA	False	NA	-11	True	AATAAA	-38	NA	22946515	22932677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.6	chr16	-	1291	10	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	1237	junction_9	143.061758225833	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATACAATTTTATTTAAC	NA	False	NA	-24	True	AATAAA	-25	NA	22946467	22932690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_22932858_22932936_22933054_22933194_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ES.13429.8	chr16	-	1270	12	NNC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	694.194925825105	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTGAATATACAATTT	NA	False	NA	-32	True	AATAAA	-17	NA	22946466	22932698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933358_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
ES.1343.1	chr1	+	138	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTTAAAAAAAAAAA	6866	False	NA	NA	False	NA	NA	NA	133053064	133053202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133053100_133053200
ES.13430.1	chr16	+	322	1	Intergenic	novelGene_11259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATTCAAAGGTTT	855	False	NA	NA	False	NA	NA	NA	22952004	22952326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22952000_22952300
ES.13431.1	chr16	+	180	1	Intergenic	novelGene_11260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGCAGTTTGTAAGTA	134	False	NA	NA	False	NA	NA	NA	22959344	22959524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_22959300_22959500
ES.13432.1	chr16	+	4369	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	137	0	137	0	multi-exon	FALSE	canonical	2	4	junction_2	3.46410161513775	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCTTCTCTTTATAC	NA	False	NA	NA	False	AATAAA	-16	NA	23043626	23179098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ES.13432.2	chr16	+	4483	9	NNC	ENSMUSG00000022885.17	novel	4506	8	NA	NA	166	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.99843725578305	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGCTGCTTCTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	23043655	23179093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_23043980_23075708_23075852_23126790_23126939_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ES.13432.3	chr16	+	4260	9	NNC	ENSMUSG00000022885.17	novel	4506	8	NA	NA	172	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.39992897669951	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTGCTTCTCTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	23043661	23179095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378_23178671_23178741
ES.13432.4	chr16	+	4651	10	NNC	ENSMUSG00000022885.17	novel	4506	8	NA	NA	205	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.81766297526196	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCTTCTCTTTATAC	NA	False	NA	NA	False	AATAAA	-16	NA	23043694	23179098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_23043980_23075708_23075852_23126790_23126939_23136313_23136449_23136937_23137137_23139782_23140429_23147091_23147190_23173615_23173715_23174955_23175134_23176378
ES.13432.5	chr16	+	3909	6	NNC	ENSMUSG00000022885.17	novel	4506	8	NA	NA	-380	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.15363949069005	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTCTCTTTATACTT	8034	False	NA	NA	False	AATAAA	-18	NA	23087998	23179100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_23088131_23136313_23136449_23139782_23140429_23173615_23173715_23174958_23175134_23176378
ES.13432.6	chr16	+	183	1	Intergenic	novelGene_11261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAAGTT	NA	False	NA	NA	False	NA	NA	NA	23093966	23094149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_23094000_23094100
ES.13432.7	chr16	+	348	1	Intergenic	novelGene_11262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTAAAGTTTCAAAAC	6967	False	NA	NA	False	NA	NA	NA	23153567	23153915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_23153600_23153900
ES.13432.8	chr16	+	245	2	Intergenic	novelGene_11263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAGTTTCAAAACTC	6968	False	NA	NA	False	NA	NA	NA	23153568	23153917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_23153719_23153822
ES.13432.9	chr16	+	203	1	Intergenic	novelGene_11264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGTGTGTATGTG	1839	False	NA	NA	False	NA	NA	NA	23159180	23159383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_23159200_23159400
ES.13433.1	chr16	-	2725	4	NNC	ENSMUSG00000022887.10	novel	3786	11	NA	NA	38259	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGCTTGAGAGTTTG	NA	False	NA	0	True	AATAAA	-17	NA	23301087	23287112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_23289481_23293623_23293699_23295016_23295155_23300943
ES.13433.2	chr16	-	2882	6	NNC	ENSMUSG00000022887.10	novel	3786	11	NA	NA	35635	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.22710574513201	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCCTGGCTTGAGAGT	NA	False	NA	-3	True	AATAAA	-14	NA	23303711	23287115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23303605
ES.13434.1	chr16	+	1621	6	Fusion	ENSMUSG00000109783.2_ENSMUSG00000033355.7	novel	672	4	NA	NA	288	-3	multi-exon	FALSE	canonical	0	0	junction_2	1.6	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCACCTGTGCTATGA	NA	False	NA	NA	False	AATAAA	-15	NA	23345916	23432483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_23346044_23346244_23346357_23420364_23420572_23421184_23421286_23428678_23428900_23431630
ES.13434.2	chr16	+	946	5	NNC	ENSMUSG00000109783.2	novel	1155	5	NA	NA	349	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.78535710713571	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGGTGTTTACCTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	23345977	23378830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_23346044_23346244_23346357_23353329_23353550_23373444_23373684_23378521
ES.13435.1	chr16	-	192	1	Intergenic	novelGene_11265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	23439217	23439025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_23439000_23439200
ES.13436.1	chr16	-	6612	2	NNC	ENSMUSG00000004366.5	novel	721	2	NA	NA	-6149	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGCGTTTGACTTCTT	NA	False	NA	-4	True	AATAAA	-20	NA	23715857	23708328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_23708601_23709517
ES.13437.1	chr16	-	2509	4	NNC	ENSMUSG00000047531.10	novel	910	4	NA	NA	-14	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	2.05480466765633	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTGGTTTGACACTT	NA	False	NA	NA	False	NA	NA	NA	23751158	23744298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_23746466_23749284_23749460_23750387_23750477_23751080
ES.13437.2	chr16	-	1479	4	FSM	ENSMUSG00000047531.10	ENSMUST00000231038.2	910	4	21	-590	21	590	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAAACTCAGTCAGGC	NA	False	NA	NA	False	NA	NA	NA	23751123	23745386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_23746466_23749284_23749460_23750387_23750477_23750987
ES.13438.1	chr16	-	3304	10	FSM	ENSMUSG00000022508.6	ENSMUST00000023151.6	3525	10	221	0	221	0	multi-exon	FALSE	canonical	0	0	junction_5	2.06080411011016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGCTCTTTCTGAGGA	NA	False	NA	-1	True	AATAAA	-14	NA	23807381	23783801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_23785019_23786809_23786948_23787056_23787188_23788655_23788824_23790164_23790350_23790994_23791970_23793562_23793785_23796264_23796437_23797300_23797340_23807324
ES.13438.2	chr16	-	223	1	NIC	ENSMUSG00000022508.6	novel	3525	10	NA	NA	248	-20688	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTCAGGTGTTAAA	NA	False	NA	NA	False	TATAAA	-18	NA	23807354	23807131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_23807100_23807400
ES.13439.1	chr16	-	4099	1	Intergenic	novelGene_11266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAACCAAGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	23817216	23813117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_23813100_23817200
ES.1344.1	chr1	+	145	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAAAACTA	1345	False	NA	NA	False	NA	NA	NA	133054658	133054803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133054700_133054800
ES.1344.10	chr1	+	2930	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	136	2528	-65	-2528	multi-exon	FALSE	canonical	3	372	junction_1	0	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGGGTGAGAGTTTAAT	5703	False	NA	NA	False	TTTAAA	-13	NA	133059016	133064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133061354_133064400
ES.1344.11	chr1	+	4893	3	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-65	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	186	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTATGTGACTTTAT	5703	False	NA	11	True	AATAAA	-16	NA	133059016	133067517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061354_133064400_133065212_133065772
ES.1344.12	chr1	+	5407	2	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-65	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAATGCTATGTGACT	5703	False	NA	7	True	AATAAA	-12	NA	133059016	133067513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061338_133064427
ES.1344.13	chr1	+	2744	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	139	2711	-62	-2711	multi-exon	FALSE	canonical	3	372	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTCTTTTCCTATTT	5706	False	NA	95	True	AATGAA	-16	NA	133059019	133064810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133061354_133064400
ES.1344.14	chr1	+	3573	2	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	1751	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTATGTGACTTTATG	7519	False	NA	12	True	AATAAA	-17	NA	133060832	133067518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061331_133064443
ES.1344.15	chr1	+	4313	1	NIC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	4117	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	552	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTAAATGCTATGTGA	9885	False	NA	5	True	AATAAA	-10	NA	133063198	133067511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133063200_133067500
ES.1344.16	chr1	+	2047	1	NIC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	5057	-1336	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGCATTGTAGACAT	NA	False	NA	13	True	CATAAA	-13	NA	133064138	133066185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133064100_133066200
ES.1344.2	chr1	+	3232	2	Genic_Genomic	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-4222	14	multi-exon	FALSE	canonical	0	0	junction_1	0	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTTATGTTGGTTTT	1345	False	NA	29	True	AATAAA	-34	NA	133054658	133067535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_133054775_133064419
ES.1344.3	chr1	+	5671	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	-59	-18	-59	18	multi-exon	FALSE	canonical	3	372	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTGGTTTTAGTA	5508	False	NA	33	True	AATAAA	-38	NA	133058821	133067539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133061354_133064400
ES.1344.4	chr1	+	4315	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	-51	1330	-51	-1330	multi-exon	FALSE	canonical	3	372	junction_1	0	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTAGACATTTTTTT	5516	False	NA	19	True	CATAAA	-19	NA	133058829	133066191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133061354_133064400
ES.1344.5	chr1	+	4632	3	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	186	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGACTTTATGTATTTT	5553	False	NA	18	True	AATAAA	-23	NA	133058866	133067524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061354_133064400_133066082_133067060
ES.1344.6	chr1	+	3826	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	-125	-13	76	13	multi-exon	FALSE	canonical	3	18	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTATGTTGGTTT	5643	False	NA	28	True	AATAAA	-33	NA	133058956	133067534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133059649_133064400
ES.1344.7	chr1	+	5049	3	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-100	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	186	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTATGTGACTTTATG	5668	False	NA	12	True	AATAAA	-17	NA	133058981	133067518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061354_133064400_133065287_133065727
ES.1344.9	chr1	+	4720	3	NNC	ENSMUSG00000046062.6	novel	5594	2	NA	NA	-67	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	186	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTATGTGACTTTAT	5701	False	NA	11	True	AATAAA	-16	NA	133059014	133067517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133061354_133064400_133065143_133065878
ES.13440.1	chr16	-	138	1	Intergenic	novelGene_11267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATAAATATTTT	7957	False	NA	NA	False	NA	NA	NA	24208555	24208417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_24208400_24208600
ES.13441.1	chr16	+	5329	13	FSM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	-284	10414	-251	1134	multi-exon	FALSE	canonical	0	0	junction_3	3.30298686376774	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCACAAACATTTGGTTAT	NA	False	NA	NA	False	TATAAA	-28	NA	24212005	24800914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_24212355_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ES.13441.10	chr16	+	1499	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	-75	650	multi-exon	FALSE	non_canonical	0	0	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	24348068	24349762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_24348177_24348371
ES.13441.11	chr16	+	1674	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	-75	672	multi-exon	FALSE	non_canonical	0	0	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348068	24349784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_24349512_24349553
ES.13441.12	chr16	+	1089	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	-63	172	multi-exon	FALSE	non_canonical	1	15	junction_1	0	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTTTCATTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	24348080	24349284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_24348184_24348298
ES.13441.13	chr16	+	1533	2	Genic_Genomic	ENSMUSG00000116875.2	novel	969	1	NA	NA	-43	648	multi-exon	FALSE	canonical	1	1	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	24348100	24349760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_24348230_24348356
ES.13441.14	chr16	+	176	1	Intergenic	novelGene_11269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24587423	24587599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_24587400_24587600
ES.13441.15	chr16	+	4765	1	Intergenic	novelGene_11270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAAAAGAAAAGAAA	5638	False	NA	NA	False	NA	NA	NA	24600420	24605185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_24600400_24605200
ES.13441.16	chr16	+	188	1	Intergenic	novelGene_11271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	24650620	24650808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_24650600_24650800
ES.13441.17	chr16	+	8481	1	ISM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	587802	2756	136167	-2756	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGGCAGGGAAGCAGTA	NA	False	NA	NA	False	AATAGA	-35	NA	24800091	24808572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_24800100_24808600
ES.13441.18	chr16	+	3491	1	ISM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	595548	0	143913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCTGTGTGGAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	24807837	24811328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_24807800_24811300
ES.13441.2	chr16	+	2571	1	Genic_Genomic	ENSMUSG00000033306.16	novel	NA	NA	NA	NA	-59	-289165	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAAATGTGATTGCCTT	NA	False	NA	NA	False	NA	NA	NA	24212197	24214768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_24212200_24214800
ES.13441.3	chr16	+	4188	7	FSM	ENSMUSG00000033306.16	ENSMUST00000231352.2	4137	7	-50	-1	-50	1	multi-exon	FALSE	canonical	0	0	junction_3	3.1446603773522	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24212206	24503934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_24212355_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495
ES.13441.4	chr16	+	4005	13	FSM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	-79	11533	-46	15	multi-exon	FALSE	canonical	0	0	junction_3	3.30298686376774	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTAATTACTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	24212210	24799795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_24212355_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ES.13441.5	chr16	+	2696	8	NNC	ENSMUSG00000033306.16	novel	4306	8	NA	NA	-1	23586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.49343407446785	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGATAGGGCGATAATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	24212486	24527519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_24212534_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24525597
ES.13441.6	chr16	+	3890	13	NIC	ENSMUSG00000033306.16	novel	4306	8	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.37782803325187	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	24212486	24799777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_24212534_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ES.13441.7	chr16	+	4069	7	ISM	ENSMUSG00000033306.16	ENSMUST00000231279.2	4306	8	18	79940	18	2	5prime_fragment	FALSE	canonical	0	0	junction_3	3.39934634239519	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24212505	24503935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_24212534_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495
ES.13441.8	chr16	+	1236	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-77	-190	-77	190	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTACCAGTGTATC	NA	False	NA	NA	False	AATAAA	-39	NA	24348066	24349302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_24348100_24349300
ES.13441.9	chr16	+	1718	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-77	-672	-77	672	mono-exon	FALSE	NA	NA	NA	NA	NA	668	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348066	24349784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_24348100_24349800
ES.13442.1	chr16	-	597	2	Intergenic	novelGene_11268	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGTTTGGATATTT	4357	False	NA	NA	False	AATAAA	-18	NA	24212155	24211307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_24211858_24212108
ES.13443.1	chr16	-	4348	2	Antisense	novelGene_ENSMUSG00000116875.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCTATGTGGCAGTAAC	NA	False	NA	NA	False	NA	NA	NA	24349944	24343867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_24348057_24349785
ES.13444.1	chr16	-	3131	1	Antisense	novelGene_ENSMUSG00000033306.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGCATCCTAGTCTAG	NA	False	NA	NA	False	NA	NA	NA	24806101	24802970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_24803000_24806100
ES.13445.1	chr16	+	1828	4	Intergenic	novelGene_11272	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTTC	NA	False	NA	NA	False	NA	NA	NA	25336664	25341911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_25336912_25339723_25339782_25340161_25340249_25340475
ES.13445.2	chr16	+	5235	1	Intergenic	novelGene_11274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	25336674	25341909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_25336700_25341900
ES.13445.3	chr16	+	5163	2	Intergenic	novelGene_11273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	25336674	25341906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_25337107_25337175
ES.13445.4	chr16	+	599	1	Intergenic	novelGene_11275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTTTATCTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	25336824	25337423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_25336800_25337400
ES.13446.1	chr16	+	4828	14	NNC	ENSMUSG00000022510.15	novel	1782	4	NA	NA	-49862	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.842650088469486	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAAATTGTGTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	25570803	25710831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_25570886_25582015_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684950_25686916_25687000_25689746_25689884_25701276_25701435_25703560_25703706_25704955_25705050_25707757
ES.13446.2	chr16	+	4825	14	NNC	ENSMUSG00000022510.15	novel	1782	4	NA	NA	-49854	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.842650088469486	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATACACTGAGAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	25570811	25710824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_25570886_25582015_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25701276_25701435_25703560_25703706_25704955_25705050_25707757
ES.13447.1	chr16	+	146	1	Intergenic	novelGene_11276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTACAAAAAAAAAGAATGTA	NA	False	NA	NA	False	NA	NA	NA	25902225	25902371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_25902200_25902400
ES.13448.1	chr16	-	3301	15	FSM	ENSMUSG00000038168.6	ENSMUST00000039990.6	3283	15	-14	-4	-14	4	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTCCGATGCACACC	NA	False	NA	NA	False	AATAAA	-19	NA	25924548	25778033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_25779201_25784473_25784615_25787478_25787555_25788653_25788772_25789581_25789733_25790352_25790449_25791027_25791156_25799882_25799978_25801442_25801484_25803251_25803342_25803681_25803825_25805901_25806034_25811413_25811604_25815893_25816044_25923965
ES.13449.1	chr16	+	2006	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	-104	404	-55	-404	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTGTGTGAGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	26400398	26520702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
ES.13449.2	chr16	+	4548	11	FSM	ENSMUSG00000022514.15	ENSMUST00000023156.13	4520	11	-31	3	-16	-3	multi-exon	FALSE	canonical	1	2	junction_10	6.68505796534331	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTATTTTGTGCATGT	NA	False	NA	NA	False	AATAAA	-19	NA	26400475	26536491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ES.13449.3	chr16	+	1412	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	6	888	2	-888	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAATAAGACACAATTT	NA	False	NA	NA	False	AATACA	-3	NA	26400508	26520218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
ES.13449.4	chr16	+	5476	7	ISM	ENSMUSG00000022514.15	ENSMUST00000023156.13	4520	11	109364	0	-31313	0	3prime_fragment	FALSE	canonical	1	2	junction_6	4.85340659285368	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTGCATGTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	26509870	26536494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ES.1345.1	chr1	-	4334	1	FSM	ENSMUSG00000102425.2	ENSMUST00000195676.2	3107	1	-290	-937	-290	937	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTATCTATTCCCTGTGC	8586	False	NA	NA	False	AATAAA	-3	NA	133059810	133055476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133055500_133059800
ES.13450.1	chr16	-	1851	1	Intergenic	novelGene_11277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26402944	26401093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_26401100_26402900
ES.13451.1	chr16	-	354	1	Intergenic	novelGene_11278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCTCAGTGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	26487514	26487160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_26487200_26487500
ES.13452.1	chr16	+	208	1	Intergenic	novelGene_11279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTACTTGTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	26593643	26593851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_26593600_26593900
ES.13453.1	chr16	-	6328	1	Intergenic	novelGene_11280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTATTGCATATATGC	6618	False	NA	NA	False	AATAAA	-21	NA	26686107	26679779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_26679800_26686100
ES.13454.1	chr16	+	7089	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCTACTGTTTTCAT	NA	False	NA	13	True	AATAAA	-22	NA	27207618	27270968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.10	chr16	+	6017	10	FSM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	14	-4935	14	-902	multi-exon	FALSE	canonical	1	2	junction_6	35.7473991111224	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTAATGCCTGTTGT	NA	False	NA	NA	False	TATAAA	-22	NA	27207743	27270066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.11	chr16	+	6054	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	133	902	22	-902	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTAATGCCTGTTGT	NA	False	NA	NA	False	TATAAA	-22	NA	27207751	27270066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.12	chr16	+	3981	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	139	2969	28	2866	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTCTCCTTTAAAAGGT	NA	False	NA	NA	False	TATAAA	-25	NA	27207757	27267999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.13	chr16	+	3479	12	FSM	ENSMUSG00000038127.16	ENSMUST00000239351.2	1779	12	151	-1851	40	1851	multi-exon	FALSE	canonical	0	0	junction_5	41.9986225669445	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGTCTTATTTTAC	NA	False	NA	NA	False	TTTAAA	-19	NA	27207769	27266984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27240442_27240968_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.14	chr16	+	5186	12	FSM	ENSMUSG00000038127.16	ENSMUST00000239351.2	1779	12	154	-3561	43	-2274	multi-exon	FALSE	canonical	0	0	junction_5	41.9986225669445	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGCGTCTGCTATAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	27207772	27268694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27240442_27240968_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.15	chr16	+	1455	10	FSM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	47	-406	47	404	multi-exon	FALSE	canonical	1	2	junction_6	35.7473991111224	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACAGAGCAGTGAA	NA	False	NA	NA	False	AATAAA	-8	NA	27207776	27265537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.16	chr16	+	1078	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	159	5852	48	-15	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGGCTGTTGTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	27207777	27265116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.17	chr16	+	2975	11	NNC	ENSMUSG00000038127.16	novel	7089	11	NA	NA	49	1851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.5312901583477	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGTCTTATTTTAC	NA	False	NA	NA	False	TTTAAA	-19	NA	27207778	27266984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_27207888_27224396_27224460_27225400_27225558_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.18	chr16	+	3114	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	169	3806	58	2029	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCACTGTGGTCTCTG	NA	False	NA	NA	False	AATATA	-45	NA	27207787	27267162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.19	chr16	+	1447	11	NNC	ENSMUSG00000038127.16	novel	7089	11	NA	NA	65	411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.5312901583477	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCAGTGAAGTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	27207794	27265544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254353_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.2	chr16	+	1420	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	21	5648	21	187	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGTCATAGGATATTGGC	NA	False	NA	NA	False	TATAAA	-15	NA	27207639	27265320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.20	chr16	+	2422	1	NIC	ENSMUSG00000038127.16	novel	1779	12	NA	NA	13258	14556	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGAGATTTTGCCGTCC	NA	False	NA	NA	False	NA	NA	NA	27221975	27224397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_27222000_27224400
ES.13454.21	chr16	+	6773	9	ISM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	16665	-5833	15677	-4	3prime_fragment	FALSE	canonical	1	2	junction_5	37.7257786533293	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGATGGCCTACTGTTT	NA	False	NA	9	True	AATAAA	-18	NA	27224394	27270964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.22	chr16	+	2832	10	ISM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	16776	3990	15677	1845	3prime_fragment	FALSE	canonical	3	85	junction_5	13.1806067789661	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTGTTTGTCTTA	NA	False	NA	NA	False	TTTAAA	-13	NA	27224394	27266978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.23	chr16	+	1475	1	NIC	ENSMUSG00000038127.16	novel	1779	12	NA	NA	31838	-15069	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGAAGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	27240555	27242030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_27240600_27242000
ES.13454.24	chr16	+	1754	1	Intergenic	novelGene_11281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	27248153	27249907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_27248200_27249900
ES.13454.3	chr16	+	4779	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	37	2273	37	-2273	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCGTCTGCTATAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	27207655	27268695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.4	chr16	+	1076	10	FSM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	5	15	5	-15	multi-exon	FALSE	canonical	1	2	junction_6	35.7473991111224	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGGCTGTTGTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	27207734	27265116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.5	chr16	+	6172	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	124	793	13	-793	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGAGGTGATACTGCC	NA	False	NA	NA	False	CATAAA	-15	NA	27207742	27270175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.6	chr16	+	1770	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	124	5195	13	640	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTTTCTAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	27207742	27265773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.7	chr16	+	2069	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	125	4895	14	940	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTTACTCAATATCAAT	NA	False	NA	NA	False	TATAAA	-20	NA	27207743	27266073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.8	chr16	+	1533	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	125	5431	14	404	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACAGAGCAGTGAA	NA	False	NA	NA	False	AATAAA	-8	NA	27207743	27265537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13454.9	chr16	+	2978	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	125	3986	14	1849	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTGTCTTATTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	27207743	27266982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ES.13455.1	chr16	-	4854	6	Antisense	novelGene_ENSMUSG00000038127.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27268270	27253179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_27254427_27255116_27255161_27255245_27255351_27257048_27257126_27263291_27263400_27264997
ES.13455.2	chr16	-	1577	2	Antisense	novelGene_ENSMUSG00000038127.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTAGATCTTTCCCACAG	NA	False	NA	NA	False	NA	NA	NA	27257066	27253791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_27255351_27257048
ES.13456.1	chr16	+	151	1	Intergenic	novelGene_11282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGAATGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	28373281	28373432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_28373300_28373400
ES.13457.1	chr16	+	157	1	Intergenic	novelGene_11283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	28686523	28686680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_28686500_28686700
ES.13458.1	chr16	+	6374	1	Intergenic	novelGene_11284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCAGTCCAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	28689184	28695558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_28689200_28695600
ES.13458.2	chr16	+	7151	1	Intergenic	novelGene_11285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28690164	28697315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_28690200_28697300
ES.13459.1	chr16	+	1927	1	Intergenic	novelGene_11286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAAAAAGGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28740314	28742241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_28740300_28742200
ES.1346.1	chr1	-	2283	1	Antisense	novelGene_ENSMUSG00000046062.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCCAAAAAAAAAAAAAAAAA	7127	False	NA	NA	False	NA	NA	NA	133064636	133062353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_133062400_133064600
ES.1346.2	chr1	-	177	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGATTTAAAAA	8178	False	NA	NA	False	NA	NA	NA	133063585	133063408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133063400_133063600
ES.13460.1	chr16	-	3881	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-915	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.5	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	3882	False	NA	0	True	AATAAA	-24	NA	28749340	28644927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_28647762_28748204_28749147_28749235
ES.13460.2	chr16	-	3651	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-489	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTGTCATTATTAC	4308	False	NA	-2	True	AATAAA	-22	NA	28748914	28644929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_28647762_28747014_28747124_28748204
ES.13460.3	chr16	-	3693	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-509	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTGTCATTATTAC	4288	False	NA	-2	True	AATAAA	-22	NA	28748934	28644929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_28647762_28656233_28656365_28748204
ES.13460.4	chr16	-	3246	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTTGTCATTATTA	4754	False	NA	-3	True	AATAAA	-21	NA	28748468	28644930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_28647762_28746972_28747124_28748204
ES.13460.5	chr16	-	3176	3	NNC	ENSMUSG00000051065.10	novel	3055	2	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTTGTCATTATTA	4789	False	NA	-3	True	AATAAA	-21	NA	28748433	28644930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_28647762_28743135_28743252_28748204
ES.13461.1	chr16	-	177	1	Intergenic	novelGene_11287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATCCTACTCCT	NA	False	NA	NA	False	NA	NA	NA	28776283	28776106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_28776100_28776300
ES.13462.1	chr16	-	4110	11	NIC	ENSMUSG00000038094.16	novel	3809	29	NA	NA	-14780	0	intron_retention	FALSE	canonical	0	0	junction_3	1.78885438199983	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGAGGGAAGGTCACA	NA	False	NA	NA	False	NA	NA	NA	29241923	29214863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_29215412_29222598_29222680_29226358_29226448_29227701_29227896_29228518_29228691_29232546_29234698_29236582_29236693_29237359_29237403_29239197_29239278_29240477_29240601_29241404
ES.13463.1	chr16	+	6328	2	Antisense	novelGene_ENSMUSG00000038094.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29242704	29268338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_29243332_29262637
ES.13464.1	chr16	+	5849	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-58	-297	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_28	107.086818678556	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398093	29473405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.10	chr16	+	10608	27	NIC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	-26	-50	intron_retention	FALSE	canonical	3	253	junction_4	66.6785097961784	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29398125	29473652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29449013_29467754
ES.13464.11	chr16	+	5961	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	-26	295	-26	-295	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTATTATTGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	29398125	29473407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.12	chr16	+	6085	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-25	-281	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGAGTATCTTTTACAT	NA	False	NA	20	True	ATTAAA	-31	NA	29398126	29473421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.13	chr16	+	6125	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-14	-284	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGAGAGTATCTTTTA	NA	False	NA	17	True	ATTAAA	-28	NA	29398137	29473418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.14	chr16	+	4280	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	4	-87	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	122.360027046365	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAATGAAAACTTGAGT	NA	False	NA	-81	True	NA	NA	NA	29398155	29470607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476
ES.13464.15	chr16	+	3726	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	9	5368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	117.280825007277	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAACAATAAACT	NA	False	NA	NA	False	CATAAA	-8	NA	29398160	29454590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29454044
ES.13464.16	chr16	+	5990	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-37	-2723	9	-285	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGGAGAGTATCTTTT	NA	False	NA	16	True	ATTAAA	-27	NA	29398160	29473417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.17	chr16	+	3637	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	10	257	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCATCAATTGTATAT	NA	False	NA	17	True	AATAAA	-18	NA	29398161	29470954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.18	chr16	+	3557	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	10	264	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	97.3391780153007	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATTGTATATGACAAGA	NA	False	NA	24	True	AATAAA	-25	NA	29398161	29470961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416436_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.19	chr16	+	4418	30	NNC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	100.781889734487	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398163	29470696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476
ES.13464.2	chr16	+	3333	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-101	-2	-55	-1	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398096	29470696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.21	chr16	+	3582	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	19	265	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTGTATATGACAAGAT	NA	False	NA	25	True	AATAAA	-26	NA	29398170	29470962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.22	chr16	+	3281	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	97.3391780153007	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTACGTGTGTTCCAGGC	NA	False	NA	7	True	AATAAA	-17	NA	29398171	29470695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416436_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.23	chr16	+	3040	26	ISM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	20	25018	20	-538	5prime_fragment	FALSE	canonical	3	145	junction_5	74.4789903261316	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCGTCCTGAGCACTA	NA	False	NA	NA	False	AATAAA	-3	NA	29398171	29448684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443
ES.13464.24	chr16	+	3469	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	20	2741	20	264	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATTGTATATGACAAGA	NA	False	NA	24	True	AATAAA	-25	NA	29398171	29470961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.26	chr16	+	7260	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	20	-300	intron_retention	FALSE	canonical	3	139	junction_3	94.4415591019778	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTATGATTCTATTAT	NA	False	NA	1	True	ATTAAA	-12	NA	29398171	29473402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.28	chr16	+	3251	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.371763998898	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398171	29470697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398382_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.29	chr16	+	3650	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-26	-394	20	391	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGCTTCAGCTGGGTT	NA	False	NA	NA	False	AAGAAA	-13	NA	29398171	29471088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.3	chr16	+	3445	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398096	29470697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.31	chr16	+	5890	30	NNC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	-14	-297	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	123.831902478092	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398181	29473405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424453_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.32	chr16	+	3630	29	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-14	5404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	123.51631719026	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTATTGTGATGGTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	29398181	29454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29454044
ES.13464.34	chr16	+	3320	28	ISM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	-15	18590	-13	6	5prime_fragment	FALSE	canonical	3	253	junction_5	69.0280156242021	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGTGTCACTGTAGCTA	NA	False	NA	NA	False	AATAAA	-27	NA	29398182	29449228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901
ES.13464.35	chr16	+	4282	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	107.349705093556	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398188	29470696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476
ES.13464.36	chr16	+	2715	21	ISM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	-9	30291	-7	2	5prime_fragment	FALSE	canonical	3	253	junction_5	60.2297891412547	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGCCCCGTGGTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	29398188	29437527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939
ES.13464.38	chr16	+	3568	32	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	133.138884399043	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398188	29470694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470109_29470328_29470571
ES.13464.39	chr16	+	5883	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-7	-302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	107.284002269011	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATATTATGATTCTATT	NA	False	NA	-1	True	ATTAAA	-10	NA	29398188	29473400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449017_29467766_29467830_29470571
ES.13464.4	chr16	+	3380	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398107	29470697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.40	chr16	+	5966	32	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-7	-292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	115.442639963526	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTATTGGAGAGT	NA	False	NA	9	True	ATTAAA	-20	NA	29398188	29473410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571_29470969_29471068
ES.13464.41	chr16	+	2767	22	NIC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	90.7358679488233	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCTGCCCCGTGGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	29398189	29437526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939
ES.13464.42	chr16	+	2605	20	ISM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	38	36173	-6	4	5prime_fragment	FALSE	canonical	3	145	junction_5	72.8545015311463	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCCCCGTGGTGTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	29398189	29437529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939
ES.13464.43	chr16	+	3305	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-6	260	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_28	107.086818678556	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCAATTGTATATGAC	NA	False	NA	20	True	AATAAA	-21	NA	29398189	29470957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.44	chr16	+	3360	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-6	261	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_29	122.144940315629	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATCAATTGTATATGACA	NA	False	NA	21	True	AATAAA	-22	NA	29398189	29470958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.45	chr16	+	5694	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-8	-2456	-6	-552	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGGTGTATGGTAGATT	NA	False	NA	NA	False	AATAAA	-34	NA	29398189	29473150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.46	chr16	+	5966	29	FSM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	-7	-2806	-5	-70	multi-exon	FALSE	canonical	3	253	junction_5	68.8867378604999	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTGTCCTGCCTCCT	NA	False	NA	-64	True	AATGAA	-7	NA	29398190	29470624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ES.13464.47	chr16	+	3352	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	122.063844860885	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398190	29470694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476_29469535_29470571
ES.13464.48	chr16	+	5200	23	NIC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-5	-297	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	100.482760332143	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398190	29473405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29467754_29467830_29470571
ES.13464.5	chr16	+	3260	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	-35	3005	-35	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398116	29470697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.50	chr16	+	5925	29	NIC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-3	-298	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	103.008092360924	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29398192	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.52	chr16	+	5985	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	-297	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_23	100.49707611059	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398195	29473405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439683_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.53	chr16	+	5910	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	1	-298	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	116.098564447054	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29398196	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.55	chr16	+	5928	30	NNC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	1	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	101.052558110097	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTCCTTTCCTCC	NA	False	NA	-57	True	AATGAA	-14	NA	29398196	29470631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29468773_29468811
ES.13464.57	chr16	+	4373	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	-63	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_30	116.317291157515	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTCCTTTCCTCC	NA	False	NA	-57	True	AATGAA	-14	NA	29398197	29470631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476
ES.13464.58	chr16	+	6231	29	ISM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	1	-260	1	257	intron_retention	FALSE	canonical	3	139	junction_4	100.509537317793	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCATCAATTGTATAT	NA	False	NA	17	True	AATAAA	-18	NA	29398198	29470954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ES.13464.59	chr16	+	5795	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	1	-553	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCTGGTGTATGGTAGAT	NA	False	NA	NA	False	AATAAA	-33	NA	29398198	29473149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.6	chr16	+	3425	29	NIC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	-29	-3	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	94.210332420037	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAAAATCAGAGTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	29398122	29449219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901
ES.13464.60	chr16	+	3354	29	ISM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	1	2617	1	259	5prime_fragment	FALSE	canonical	3	139	junction_4	100.509537317793	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACATGCATATGACTTG	NA	False	NA	NA	False	NA	NA	NA	29398198	29468077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ES.13464.63	chr16	+	3403	30	NNC	ENSMUSG00000038084.17	novel	3153	29	NA	NA	2	257	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_29	100.511817444009	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCATCAATTGTATAT	NA	False	NA	17	True	AATAAA	-18	NA	29398199	29470954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470713
ES.13464.65	chr16	+	3489	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	2	262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	122.344924775454	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAATTGTATATGACAA	NA	False	NA	22	True	AATAAA	-23	NA	29398199	29470959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444285_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.66	chr16	+	6017	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	3	-63	intron_retention	FALSE	canonical	3	139	junction_4	93.7257618290721	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCCTCCTTTCCTCC	NA	False	NA	-57	True	AATGAA	-14	NA	29398200	29470631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ES.13464.67	chr16	+	6283	29	FSM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	7	-3137	-5	258	multi-exon	FALSE	canonical	3	253	junction_5	68.8867378604999	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCATCAATTGTATATG	NA	False	NA	18	True	AATAAA	-19	NA	29398204	29470955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ES.13464.68	chr16	+	7071	28	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-4	3986	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	108.530298943437	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAATACCTAATAATAA	NA	False	NA	NA	False	NA	NA	NA	29398205	29453208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449502_29449596
ES.13464.69	chr16	+	5880	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-4	-293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.256845708976	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCTATTATTGGAGAG	NA	False	NA	8	True	ATTAAA	-19	NA	29398205	29473409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405871_29407058_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.7	chr16	+	3385	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	114.246424694848	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398122	29470696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416436_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.70	chr16	+	3179	27	ISM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	57	24478	-1	2	5prime_fragment	FALSE	canonical	3	145	junction_5	77.5356093034624	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGTCACTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	29398208	29449224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901
ES.13464.71	chr16	+	1515	8	ISM	ENSMUSG00000038084.17	ENSMUST00000159036.8	2288	17	13	8536	-1	-4818	5prime_fragment	FALSE	canonical	3	253	junction_5	82.3338153060888	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCATATTTATGAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	29398208	29424906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329
ES.13464.72	chr16	+	3670	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	392	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTCAGCTGGGTTA	NA	False	NA	NA	False	TATAAA	-1	NA	29398209	29471089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.75	chr16	+	3261	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_23	100.49707611059	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACGTGTGTTCCAGGCA	NA	False	NA	8	True	AATAAA	-18	NA	29398210	29470696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439683_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.76	chr16	+	3234	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.0826799040858	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCATGTACGTGTGTT	NA	False	NA	1	True	AATAAA	-11	NA	29398210	29470689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29416370_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.77	chr16	+	7133	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	1	-298	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_30	116.317291157515	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29398210	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29469476
ES.13464.79	chr16	+	3753	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	116.53671333771	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398210	29470694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470146
ES.13464.8	chr16	+	3316	28	ISM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-74	21472	-28	0	5prime_fragment	FALSE	canonical	3	139	junction_4	101.232216172624	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATCAGAGTGTCACTG	NA	False	NA	NA	False	AATAAA	-21	NA	29398123	29449222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901
ES.13464.80	chr16	+	5945	30	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	6	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	101.306166435747	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTATGATTCTATTATT	NA	False	NA	2	True	ATTAAA	-13	NA	29398215	29473403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440315_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.82	chr16	+	6017	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	9	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.331988628658	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTCTATTATTGG	NA	False	NA	4	True	ATTAAA	-15	NA	29398218	29473405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405871_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.83	chr16	+	3516	31	NNC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	62	261	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	116.14169506828	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATCAATTGTATATGACA	NA	False	NA	21	True	AATAAA	-22	NA	29398271	29470958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439683_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.85	chr16	+	5533	27	NIC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	1096	-296	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	71.9349743347725	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGATTCTATTATTGGA	NA	False	NA	5	True	ATTAAA	-16	NA	29406927	29473406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.87	chr16	+	4214	14	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-2501	-298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	129.024377312306	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29432941	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444279_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.88	chr16	+	179	1	Intergenic	novelGene_11288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29442387	29442566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29442400_29442600
ES.13464.89	chr16	+	8160	2	NNC	ENSMUSG00000038084.17	novel	4017	28	NA	NA	29762	-298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29465204	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29468773_29468812
ES.13464.9	chr16	+	5947	29	NNC	ENSMUSG00000038084.17	novel	6230	29	NA	NA	-26	-287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	108.139006111843	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTGGAGAGTATCTT	NA	False	NA	14	True	ATTAAA	-25	NA	29398125	29473415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430236_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ES.13464.90	chr16	+	5314	2	Genic_Genomic	ENSMUSG00000038084.17	novel	6230	29	NA	NA	32609	-298	multi-exon	FALSE	non_canonical	0	0	junction_1	0	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGATTCTATTATTG	NA	False	NA	3	True	ATTAAA	-14	NA	29468051	29473404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_29468773_29468811
ES.13465.1	chr16	+	187	1	Intergenic	novelGene_11289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	29484460	29484647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29484500_29484600
ES.13466.1	chr16	+	4439	2	Intergenic	novelGene_11290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTGTCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	29494623	29499226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29497230_29497393
ES.13467.1	chr16	+	2828	3	Intergenic	novelGene_11292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCTAAGCAGTAGGC	NA	False	NA	NA	False	NA	NA	NA	29499462	29521210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29499657_29502415_29502511_29518671
ES.13467.2	chr16	+	5655	3	Intergenic	novelGene_11293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGATGGTATGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	29499567	29524142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29499657_29502415_29502511_29518671
ES.13467.3	chr16	+	2472	2	Intergenic	novelGene_11294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	29502397	29521030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29502511_29518671
ES.13467.4	chr16	+	1767	1	Intergenic	novelGene_11296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCATGTGTTGATTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	29522062	29523829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29522100_29523800
ES.13468.1	chr16	-	3343	1	Intergenic	novelGene_11291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAACTTGTCTTGGCTCCG	NA	False	NA	NA	False	NA	NA	NA	29499563	29496220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29496200_29499600
ES.13469.1	chr16	-	182	1	Intergenic	novelGene_11295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	29514897	29514715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29514700_29514900
ES.1347.1	chr1	-	195	1	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGAAGGAAGGA	1511	False	NA	NA	False	NA	NA	NA	133070252	133070057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133070100_133070300
ES.13470.1	chr16	+	177	1	Intergenic	novelGene_11297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29543373	29543550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29543400_29543600
ES.13471.1	chr16	-	163	1	Intergenic	novelGene_11298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTATAATGAAG	NA	False	NA	NA	False	NA	NA	NA	29563331	29563168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29563200_29563300
ES.13472.1	chr16	-	243	1	Intergenic	novelGene_11299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGATGCTAAATGGAAT	NA	False	NA	NA	False	NA	NA	NA	29584024	29583781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29583800_29584000
ES.13472.2	chr16	-	236	2	Antisense	novelGene_ENSMUSG00000097307.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAGCCTGATGCTA	NA	False	NA	NA	False	NA	NA	NA	29643244	29583789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_29584003_29643221
ES.13473.1	chr16	-	2317	2	Intergenic	novelGene_11300	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAGAGAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	29668512	29664754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29665049_29666489
ES.13474.1	chr16	+	188	1	Intergenic	novelGene_11301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAATTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	29720280	29720468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29720300_29720500
ES.13475.1	chr16	-	1819	4	FSM	ENSMUSG00000097313.3	ENSMUST00000181968.2	1789	4	-27	-3	-27	3	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGCTTTCCTTCTCCA	NA	False	NA	NA	False	AATAAA	-26	NA	29765362	29726333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_29726669_29727207_29728521_29729333_29729414_29765271
ES.13475.2	chr16	-	732	5	NNC	ENSMUSG00000097313.3	novel	1789	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.1650635094611	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATCAGGACAGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	29765343	29726342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_29726669_29727207_29727322_29728869_29729010_29729333_29729414_29765271
ES.13475.3	chr16	-	2750	1	Intergenic	novelGene_11302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGGAGCCAATTTCT	NA	False	NA	NA	False	NA	NA	NA	29736504	29733754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29733800_29736500
ES.13475.4	chr16	-	181	1	Intergenic	novelGene_11303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAAAAAATCTTGATT	NA	False	NA	NA	False	NA	NA	NA	29741906	29741725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29741700_29741900
ES.13475.5	chr16	-	360	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-40	31287	-39	5569	5prime_fragment	FALSE	canonical	3	93	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCGGTGTGGTATTTA	NA	False	NA	NA	False	TATAAA	-13	NA	29765374	29757628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_29757886_29765271
ES.13475.6	chr16	-	2339	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	53	-17	53	17	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCATCTGTGTCCCCACC	NA	False	NA	NA	False	NA	NA	NA	29765519	29763180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_29763200_29765500
ES.13475.7	chr16	-	2026	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	200	149	-37	-149	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGACCCAAGCCTGGCT	NA	False	NA	NA	False	AGTAAA	-19	NA	29765372	29763346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_29763300_29765400
ES.13476.1	chr16	+	124	1	Intergenic	novelGene_11304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	29768234	29768358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29768200_29768400
ES.13477.1	chr16	-	174	1	Intergenic	novelGene_11305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAAAGAAACCCA	NA	False	NA	NA	False	NA	NA	NA	29775526	29775352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29775400_29775500
ES.13478.1	chr16	-	125	1	Intergenic	novelGene_11306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAACA	9709	False	NA	NA	False	AGTAAA	-5	NA	29778489	29778364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29778400_29778500
ES.13479.1	chr16	-	191	1	Intergenic	novelGene_11307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACCCCAAACAAACAAAAA	6321	False	NA	NA	False	NA	NA	NA	29781877	29781686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29781700_29781900
ES.1348.1	chr1	-	162	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATCTTTTTAG	1316	False	NA	NA	False	NA	NA	NA	133070447	133070285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133070300_133070400
ES.13480.1	chr16	+	188	1	Intergenic	novelGene_11308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCAGATAGGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	29800760	29800948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29800800_29800900
ES.13481.1	chr16	+	1601	2	ISM	ENSMUSG00000097184.3	ENSMUST00000181485.3	2428	3	-396	3733	-396	-3733	5prime_fragment	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTATCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	29827088	29836515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29827549_29835374
ES.13481.2	chr16	+	2471	3	FSM	ENSMUSG00000097184.3	ENSMUST00000181485.3	2428	3	-38	-5	-38	5	multi-exon	FALSE	canonical	1	2	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTATATCATATATAT	NA	False	NA	NA	False	NA	NA	NA	29827446	29840253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29827549_29835374_29835462_29837971
ES.13481.3	chr16	+	2438	4	NNC	ENSMUSG00000097184.3	novel	2428	3	NA	NA	-2	7704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.942809041582063	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGTTTACATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	29827482	29847952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29827549_29835374_29835471_29837971_29840230_29847934
ES.13481.4	chr16	+	1207	2	NNC	ENSMUSG00000097184.3	novel	2428	3	NA	NA	405	-3731	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTATCTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	29827889	29836517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29827954_29835374
ES.13481.5	chr16	+	420	3	NNC	ENSMUSG00000097184.3	novel	2428	3	NA	NA	405	-2008	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGAGTGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	29827889	29838240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29827954_29835374_29835462_29837971
ES.13481.6	chr16	+	594	4	NNC	ENSMUSG00000097184.3	novel	2428	3	NA	NA	407	-2007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.77123616632825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTGAGTGCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	29827891	29838241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29827954_29835374_29835471_29835866_29836033_29837971
ES.13482.1	chr16	-	577	3	NNC	ENSMUSG00000116660.2	novel	1209	4	NA	NA	11	28985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTCTTCCCATGTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	29858286	29811674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_29811923_29857304_29857446_29858098
ES.13482.2	chr16	-	2110	1	Antisense	novelGene_ENSMUSG00000097184.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGGTGGTGGTACACGC	6811	False	NA	NA	False	AATAAA	-17	NA	29838935	29836825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_29836800_29838900
ES.13482.3	chr16	-	4177	3	NIC	ENSMUSG00000116660.2	novel	1209	4	NA	NA	10	3109	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAGTTGTTTGAGACA	NA	False	NA	NA	False	AATAAA	-17	NA	29858287	29837550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_29841398_29857304_29857446_29858098
ES.13482.4	chr16	-	1198	4	FSM	ENSMUSG00000116660.2	ENSMUST00000232465.2	1209	4	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGAGTGATGATTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	29858286	29840659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_29841398_29845162_29845294_29857304_29857446_29858098
ES.13483.1	chr16	-	3157	3	Intergenic	novelGene_11309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACACTGTTGGAGTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	29878209	29868081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29871033_29871694_29871799_29878107
ES.13484.1	chr16	+	3729	3	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	-1070	-1	intron_retention	FALSE	canonical	3	783	junction_2	34.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29882131	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29884517_29884648_29885069_29885689
ES.13484.10	chr16	+	223	1	NIC	ENSMUSG00000022528.9	novel	344	3	NA	NA	4	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	29884161	29884384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29884200_29884400
ES.13484.11	chr16	+	2086	3	ISM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	8	-5	8	5	intron_retention	FALSE	canonical	3	729	junction_2	61.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAACTGATTATTTCAAAA	NA	False	NA	21	True	AATAAA	-22	NA	29884165	29886619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29884517_29884648_29884745_29884980
ES.13484.12	chr16	+	1541	3	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	58	-1	intron_retention	FALSE	canonical	3	729	junction_1	27	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29884215	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29884745_29884980_29885069_29885689
ES.13484.13	chr16	+	1020	2	NNC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	335	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29885490	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29885587_29885689
ES.13484.2	chr16	+	3443	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	-1967	-8	-1011	8	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATTATTTCAAAATTT	NA	False	NA	24	True	AATAAA	-25	NA	29882190	29886622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ES.13484.3	chr16	+	2639	5	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	-961	-1	intron_retention	FALSE	canonical	3	11	junction_1	339.26344851752	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29882240	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29883608_29884352_29884517_29884648_29884745_29884980_29885069_29885689
ES.13484.4	chr16	+	1607	6	NNC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	-824	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.338811956439	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTTAGAACTGATTAT	NA	False	NA	14	True	AATAAA	-15	NA	29882377	29886612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29882572_29883465_29883608_29884352_29884517_29884648_29884745_29884980_29885069_29885689
ES.13484.5	chr16	+	1538	6	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	385.338811956439	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTTAGAACTGATTAT	NA	False	NA	14	True	AATAAA	-15	NA	29883232	29886612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_29883355_29883462_29883608_29884352_29884517_29884648_29884745_29884980_29885069_29885689
ES.13484.6	chr16	+	1383	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	-39	124	-39	-124	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTTTTTACACGAGA	NA	False	NA	9	True	TATAAA	-13	NA	29884118	29886490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ES.13484.7	chr16	+	2463	1	Genic_Genomic	ENSMUSG00000022528.9	novel	NA	NA	NA	NA	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTGATTATTTCAAAAT	NA	False	NA	22	True	AATAAA	-23	NA	29884157	29886620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_29884200_29886600
ES.13484.8	chr16	+	2323	2	ISM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	1	1	1	-1	intron_retention	FALSE	canonical	3	852	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29884158	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_29884517_29884648
ES.13484.9	chr16	+	1469	4	NNC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	376.013297637198	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	False	NA	15	True	AATAAA	-16	NA	29884158	29886613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_29884517_29884648_29884745_29884980_29885069_29885686
ES.13485.1	chr16	-	4081	1	Intergenic	novelGene_11310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTGCCTCACCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	29883013	29878932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29878900_29883000
ES.13486.1	chr16	+	202	1	Intergenic	novelGene_11311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTTGGCCGGTAACAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	29888697	29888899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29888700_29888900
ES.13487.1	chr16	+	2268	3	Intergenic	novelGene_11312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTGTGGCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	29921267	29927342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29921497_29923369_29923503_29925436
ES.13487.2	chr16	+	2569	3	Intergenic	novelGene_11313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATCCTGTTGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	29921304	29927338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_29921497_29923369_29923503_29925094
ES.13488.1	chr16	-	185	1	Intergenic	novelGene_11314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGCGGGGGGTGGGGTG	8611	False	NA	NA	False	NA	NA	NA	29937904	29937719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29937700_29937900
ES.13489.1	chr16	-	2765	4	NNC	ENSMUSG00000097621.2	novel	2010	2	NA	NA	-20	48529	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.942809041582063	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCTCTGGATACATAGT	NA	False	NA	NA	False	NA	NA	NA	30024717	29971198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_29973582_29974453_29974673_30019343_30019407_30024617
ES.13489.2	chr16	-	1961	3	NNC	ENSMUSG00000097621.2	novel	2010	2	NA	NA	-266	43675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACATACTGTACTATA	NA	False	NA	NA	False	AATAAA	-9	NA	30024963	29976052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_29977605_30019343_30019407_30024617
ES.13489.3	chr16	-	2952	1	Intergenic	novelGene_11315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGGTGTCCATGACAGC	NA	False	NA	NA	False	ACTAAA	-27	NA	30002813	29999861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_29999900_30002800
ES.13489.4	chr16	-	1838	1	ISM	ENSMUSG00000097621.2	ENSMUST00000181113.2	2010	2	3132	0	3132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTCGTCAGGAT	NA	False	NA	NA	False	NA	NA	NA	30021565	30019727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30019700_30021600
ES.1349.1	chr1	-	161	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	133072762	133072601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133072600_133072800
ES.13490.1	chr16	+	185	1	Intergenic	novelGene_11316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAGACAAAGAGTC	3332	False	NA	5	True	NA	NA	NA	30059049	30059234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30059000_30059200
ES.13491.1	chr16	+	154	1	Intergenic	novelGene_11317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	30083309	30083463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30083300_30083500
ES.13492.1	chr16	-	5314	2	FSM	ENSMUSG00000052316.10	ENSMUST00000064606.8	5310	2	-3	-1	-3	1	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTTCTCTGTGGACG	NA	False	NA	0	True	AATAAA	-16	NA	30102077	30088118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30093341_30101985
ES.13492.2	chr16	-	5386	3	NNC	ENSMUSG00000052316.10	novel	5310	2	NA	NA	156	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGAGTGTGTTCTCTGTGG	NA	False	NA	-3	True	AATAAA	-13	NA	30101918	30088121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30093341_30094284_30094373_30101839
ES.13493.1	chr16	+	169	1	Intergenic	novelGene_11318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAGCAATCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	30117719	30117888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30117700_30117900
ES.13494.1	chr16	+	2529	1	Intergenic	novelGene_11319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAAGGGGGGGGGATGC	NA	False	NA	NA	False	NA	NA	NA	30123084	30125613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30123100_30125600
ES.13495.1	chr16	-	2109	1	Genic_Genomic	ENSMUSG00000047953.8	novel	NA	NA	NA	NA	987	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTGTCCGTTCCTCTT	NA	False	NA	NA	False	AATAAA	-35	NA	30128610	30126501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_30126500_30128600
ES.13496.1	chr16	+	2884	1	Intergenic	novelGene_11320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAGAAGAAATGCC	NA	False	NA	NA	False	NA	NA	NA	30137609	30140493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30137600_30140500
ES.13497.1	chr16	+	2542	1	Intergenic	novelGene_11321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGACTTCTTAAGGA	3606	False	NA	NA	False	NA	NA	NA	30143010	30145552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30143000_30145600
ES.13498.1	chr16	+	6642	6	Antisense	novelGene_ENSMUSG00000022533.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAAAAAAGGGGGGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	30160691	30174036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_30163457_30166443_30166595_30166867_30166930_30168502_30169505_30169542_30171218_30173049
ES.13499.1	chr16	+	207	1	Intergenic	novelGene_11323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACGTGTGTGAGTATA	NA	False	NA	NA	False	NA	NA	NA	30210294	30210501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30210300_30210500
ES.135.1	chr1	+	181	1	FSM	ENSMUSG00000082193.2	ENSMUST00000121367.2	894	1	795	-82	795	82	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCCAGGAACATATACT	NA	False	NA	NA	False	AATAAA	-44	NA	14936090	14936271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_14936100_14936300
ES.1350.1	chr1	-	210	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGGGAAACTAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	133077664	133077454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133077500_133077700
ES.13500.1	chr16	+	177	1	Intergenic	novelGene_11328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	30285160	30285337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30285200_30285300
ES.13501.1	chr16	+	445	1	Intergenic	novelGene_11329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAACCACATGGCA	NA	False	NA	NA	False	NA	NA	NA	30289349	30289794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30289300_30289800
ES.13502.1	chr16	+	1747	3	Antisense	novelGene_ENSMUSG00000022537.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGCTGTTGCTACTT	NA	False	NA	NA	False	NA	NA	NA	30341664	30349364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_30341741_30344697_30344975_30347970
ES.13503.1	chr16	-	7739	34	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	23	21	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	85.8026864969915	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTACACACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-40	NA	30207632	30131219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30172756_30172884_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.100	chr16	-	4485	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	10	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.8397599844785	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTAACTATAAATCTGG	NA	False	NA	3	True	ATTAAA	-33	NA	30207645	30134366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.101	chr16	-	5619	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	13	6	intron_retention	FALSE	canonical	0	0	junction_6	75.8640412682071	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGATTATTAACTATAAATC	NA	False	NA	0	True	ATTAAA	-30	NA	30207642	30134369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152654_30155007_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.102	chr16	-	4415	34	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	74.0773303538941	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTACGATTATTAAC	NA	False	NA	-8	True	ATTAAA	-22	NA	30207648	30134377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160010_30160064_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.103	chr16	-	4296	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.0719470775943	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTGTACGATTATTAA	NA	False	NA	-9	True	ATTAAA	-21	NA	30207646	30134378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.106	chr16	-	4395	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.56533775269	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTGTACGATTATTAA	NA	False	NA	-9	True	ATTAAA	-21	NA	30207655	30134378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.108	chr16	-	4342	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	72.7884909314018	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTGTACGATTATTAA	NA	False	NA	-9	True	ATTAAA	-21	NA	30207639	30134378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160068_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.109	chr16	-	4430	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.5581799037211	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTGTACGATTATT	NA	False	NA	-11	True	ATTAAA	-19	NA	30207647	30134380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134717_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169813_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.11	chr16	-	7429	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.464394357034	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207634	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171159_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.110	chr16	-	5571	4	NIC	ENSMUSG00000022533.15	novel	924	6	NA	NA	-4823	-3	intron_retention	FALSE	canonical	0	0	junction_1	135.588429529301	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTGTACGATTATT	NA	False	NA	-11	True	ATTAAA	-19	NA	30157531	30134380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30134720_30147773_30147863_30151016_30151205_30152576
ES.13503.111	chr16	-	4289	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.3452239308051	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTGTACGATTATT	NA	False	NA	-11	True	ATTAAA	-19	NA	30207627	30134380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173107_30174621_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.112	chr16	-	4463	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.7887585031166	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTTGCTGTACGATT	NA	False	NA	-14	True	ATTAAA	-16	NA	30207653	30134383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162367_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.113	chr16	-	4267	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.9919870849619	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCATTTGCTGTACG	NA	False	NA	-17	True	ATTAAA	-13	NA	30207643	30134386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.114	chr16	-	4274	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	72.7503106544032	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGTCATTTGCTGTA	NA	False	NA	-19	True	ATTAAA	-11	NA	30207645	30134388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152654_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.115	chr16	-	4119	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	7	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.5823082246744	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAGCAGTAAAAT	NA	False	NA	-32	True	NA	NA	NA	30207648	30134401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168577_30169902_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.116	chr16	-	4097	30	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	0	-13263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.7256315948671	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTATTTTTTCCAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	30207655	30147640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.117	chr16	-	3347	25	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	23	15759	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	58.5469303683426	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTTGAAGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	30207632	30157227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.118	chr16	-	942	1	Genic_Intron	novelGene_11322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	448	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTTGGGATGTGCG	NA	False	NA	NA	False	ATTAAA	-28	NA	30158429	30157487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Intron_chr16_-_30157500_30158400
ES.13503.119	chr16	-	2746	17	ISM	ENSMUSG00000022533.15	ENSMUST00000061350.13	7220	33	-307	31754	0	9992	5prime_fragment	FALSE	canonical	3	211	junction_2	23.0867081618407	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACCATTTACTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	30207655	30162994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.12	chr16	-	8014	33	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-636	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	84.4928286065599	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30225429	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30221566_30221690_30224572
ES.13503.120	chr16	-	2971	5	FSM	ENSMUSG00000022533.15	ENSMUST00000153656.2	793	5	-303	-1875	49	1875	multi-exon	FALSE	canonical	3	230	junction_4	17.9791545963652	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAAAACTTTGGATTT	NA	False	NA	NA	False	AATAAA	-24	NA	30207606	30178593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.121	chr16	-	1138	5	FSM	ENSMUSG00000022533.15	ENSMUST00000153656.2	793	5	-351	6	1	-6	multi-exon	FALSE	canonical	3	230	junction_4	17.9791545963652	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	30207654	30180474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.122	chr16	-	4122	2	NNC	ENSMUSG00000022533.15	novel	2250	2	NA	NA	445	3787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAATGGGAGTGAGG	NA	False	NA	NA	False	NA	NA	NA	30206858	30200923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30202111_30203923
ES.13503.123	chr16	-	158	2	Antisense	novelGene_ENSMUSG00000116960.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	30345679	30200975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_30201084_30345629
ES.13503.124	chr16	-	157	1	Intergenic	novelGene_11324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAATCAATCAATCAATC	NA	False	NA	NA	False	NA	NA	NA	30215171	30215014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30215000_30215200
ES.13503.125	chr16	-	176	1	Intergenic	novelGene_11325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	30241246	30241070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30241100_30241200
ES.13503.126	chr16	-	199	1	Intergenic	novelGene_11326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAATCAGAACAAAGGA	4303	False	NA	NA	False	NA	NA	NA	30263245	30263046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30263000_30263200
ES.13503.127	chr16	-	170	1	Intergenic	novelGene_11327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAATGAAGGTGTT	1754	False	NA	NA	False	NA	NA	NA	30265794	30265624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30265600_30265800
ES.13503.128	chr16	-	1352	1	Intergenic	novelGene_11330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAAGTCTAGATTTCC	NA	False	NA	NA	False	AGTAAA	-11	NA	30330376	30329024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30329000_30330400
ES.13503.129	chr16	-	4355	11	NNC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.0668968670491	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	30369388	30330672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30333641_30335970_30336157_30337117_30337148_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30366160_30366288_30369180
ES.13503.13	chr16	-	7519	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	76.0491926889223	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207669	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178554_30180655_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.130	chr16	-	4259	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	30369381	30330672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.131	chr16	-	4224	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	15	-1834	7	-2	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGGTTTATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	30369381	30330674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.133	chr16	-	4885	6	ISM	ENSMUSG00000022537.19	ENSMUST00000089775.11	4331	12	8360	2	1287	-2	3prime_fragment	FALSE	canonical	3	13	junction_1	5.42586398650021	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGGTTTATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	30361028	30330674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556
ES.13503.134	chr16	-	4923	10	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_1	5.43650214343336	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCTCGGCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	30369389	30332508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.135	chr16	-	4647	10	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	4	intron_retention	FALSE	canonical	3	13	junction_1	5.43650214343336	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCACGGTGGAGAACA	NA	False	NA	NA	False	AATAAA	-22	NA	30369388	30332783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.136	chr16	-	2152	11	NIC	ENSMUSG00000022537.19	novel	2505	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTCTCACGGTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	30369389	30332787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.137	chr16	-	5629	10	NIC	ENSMUSG00000022537.19	novel	2505	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_1	4.90149888891395	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTCTCACGGTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	30369389	30332787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.138	chr16	-	2171	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	-45	279	-45	0	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTCTCACGGTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	30369441	30332787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.139	chr16	-	2060	11	NNC	ENSMUSG00000022537.19	novel	2505	12	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.4882271411644	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCGTCTCACGGTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	30369391	30332788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30333641_30337117_30337151_30348229_30348296_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.14	chr16	-	6486	27	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-2458	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	81.7000575782173	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	9438	False	NA	NA	False	AATAAA	-19	NA	30178519	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30176022_30176093_30178486
ES.13503.140	chr16	-	158	1	Intergenic	novelGene_11331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30345679	30345521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30345500_30345700
ES.13503.141	chr16	-	2529	10	NNC	ENSMUSG00000022537.19	novel	726	5	NA	NA	-1	-8847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.26565107262102	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGATGCCCCAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	30369389	30345775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30346665_30347855_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ES.13503.142	chr16	-	4354	5	NNC	ENSMUSG00000022537.19	novel	479	3	NA	NA	65	-8864	intron_retention	FALSE	non_canonical	0	0	junction_1	10.3772587902586	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	30362250	30345792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30346665_30347855_30348389_30356271_30356377_30358206_30358357_30359556
ES.13503.15	chr16	-	7436	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.0719470775943	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207648	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.17	chr16	-	8598	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_15	58.1704946825528	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207656	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.18	chr16	-	7370	33	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.6874455100054	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207649	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30133704_30133851_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.19	chr16	-	7391	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	74.0079875568997	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207642	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174656_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.2	chr16	-	7549	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-10	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGATCCTTACACACTT	NA	False	NA	NA	False	AATAAA	-34	NA	30207665	30131225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.20	chr16	-	7416	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	74.0079875568997	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207644	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.21	chr16	-	7435	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	87.2432102316831	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCAATATTTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	30207655	30131241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30156373_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174621_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.23	chr16	-	7239	20	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7481	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.6251440053776	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30168580	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30153386_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502
ES.13503.24	chr16	-	7536	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.8846769623132	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207653	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169866_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.25	chr16	-	7344	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.9021575387951	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207649	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.26	chr16	-	7416	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.5823082246744	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207645	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168590_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.3	chr16	-	7630	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8397599844785	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATATTTTTTCCTGGA	NA	False	NA	NA	False	AATAAA	-21	NA	30207669	30131238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.32	chr16	-	7611	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.8397599844785	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30207648	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.33	chr16	-	5321	1	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	16102	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	598	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCAATATTTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	30136564	30131243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30131200_30136600
ES.13503.36	chr16	-	7618	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	75.2249750747715	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGTCAATATTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	30207671	30131244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176085_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.37	chr16	-	7528	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	74.56533775269	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207648	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.39	chr16	-	7365	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	87.3538857335925	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207655	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156362_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160047_30160082_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.40	chr16	-	7361	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.7697996020955	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207655	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.43	chr16	-	5499	17	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	76.4941787000815	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207635	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30169877_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.44	chr16	-	7593	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	75.1480244979035	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207641	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171212_30173045_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.45	chr16	-	7570	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	43	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.6445023748264	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30207612	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207071
ES.13503.46	chr16	-	4387	12	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-6001	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.6190099755236	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATGTCAATATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	30158709	30131245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30133704_30133836_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593
ES.13503.47	chr16	-	7450	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATATGTCAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	30207645	30131247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162558_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.48	chr16	-	7583	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.914951778667	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATATGTCAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	30207644	30131247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168679_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.49	chr16	-	7524	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.3719879347331	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATATGTCAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	30207669	30131247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.50	chr16	-	7508	33	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	130	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	84.3654392731408	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATATGTCAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	30207525	30131247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30201613_30201735_30206424_30206471_30207165
ES.13503.51	chr16	-	7613	32	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	0	-7	intron_retention	FALSE	canonical	3	211	junction_17	26.3726200528035	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATATGTCAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	30207655	30131247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.52	chr16	-	7121	36	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.048775806392	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATTAAATATGTCAAT	NA	False	NA	NA	False	AATAAA	-8	NA	30207655	30131251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30131726_30131923_30132849_30132913_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185700_30185754_30187107_30187222_30206424_30206471_30207165_30207257_30207460
ES.13503.55	chr16	-	7410	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-14	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.5823082246744	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTTTAATGA	NA	False	NA	NA	False	ATTAAA	-8	NA	30207669	30131266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168590_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.57	chr16	-	13511	27	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	7	-26	intron_retention	FALSE	canonical	3	211	junction_13	26.7848374046381	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATTTTAATGA	NA	False	NA	NA	False	ATTAAA	-8	NA	30207648	30131266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30156417_30157249_30157360_30157444_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.58	chr16	-	7341	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-15	-198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGGATTTTTTTTAAG	NA	False	NA	-17	True	AATAAA	-35	NA	30207670	30131438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.59	chr16	-	7226	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	11	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7244724208357	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGAGACCGTGGATTT	NA	False	NA	-25	True	AATAAA	-27	NA	30207644	30131446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.60	chr16	-	7407	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-1	-208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8397599844785	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCCTGAGACCGTGGAT	NA	False	NA	-27	True	AATAAA	-25	NA	30207656	30131448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.61	chr16	-	7215	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	7	-210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	72.7503106544032	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCCCTGAGACCGTGG	NA	False	NA	-29	True	AATAAA	-23	NA	30207648	30131450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152654_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.62	chr16	-	7224	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	29	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATTCCCTGAGACC	NA	False	NA	-33	True	AATAAA	-19	NA	30207626	30131454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162558_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.63	chr16	-	7206	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	23	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.0719470775943	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATTCCCTGAGACC	NA	False	NA	-33	True	AATAAA	-19	NA	30207632	30131454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.64	chr16	-	7128	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-35	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	85.2451106450622	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAATTCCCTGAGAC	NA	False	NA	-34	True	AATAAA	-18	NA	30207690	30131455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.65	chr16	-	7194	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	12	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.5823082246744	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGAATTCCCTGAGA	NA	False	NA	-35	True	AATAAA	-17	NA	30207643	30131456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168590_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.66	chr16	-	5211	17	NIC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-10749	-216	intron_retention	FALSE	canonical	3	161	junction_1	46.9332970821356	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGAATTCCCTGAGA	NA	False	NA	-35	True	AATAAA	-17	NA	30163457	30131456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162726_30163339
ES.13503.67	chr16	-	7348	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	23	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.3359929223388	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGAATTCCCTGAGA	NA	False	NA	-35	True	AATAAA	-17	NA	30207632	30131456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.68	chr16	-	7384	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	21	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.8397599844785	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGAATTCCCTGAGA	NA	False	NA	-35	True	AATAAA	-17	NA	30207634	30131456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.7	chr16	-	7529	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207653	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.70	chr16	-	4137	9	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-5789	-216	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	100.590677376186	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGAATTCCCTGAGA	NA	False	NA	-35	True	AATAAA	-17	NA	30158497	30131456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30158430
ES.13503.72	chr16	-	5000	17	ISM	ENSMUSG00000022533.15	ENSMUST00000100013.9	7310	34	44622	217	-10018	-217	3prime_fragment	FALSE	canonical	3	161	junction_1	46.9519368610071	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGAATTCCCTGAG	NA	False	NA	-36	True	AATAAA	-16	NA	30162726	30131457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707
ES.13503.73	chr16	-	7015	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	30	-217	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	72.0719470775943	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGAATTCCCTGAG	NA	False	NA	-36	True	AATAAA	-16	NA	30207625	30131457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162509_30163399_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.74	chr16	-	7305	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	9	-217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGAATTCCCTGAG	NA	False	NA	-36	True	AATAAA	-16	NA	30207646	30131457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.76	chr16	-	9329	31	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	7	-218	intron_retention	FALSE	canonical	0	0	junction_16	61.7643910356121	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTGAATTCCCTGA	NA	False	NA	-37	True	AATAAA	-15	NA	30207648	30131458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30170227_30171085_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.77	chr16	-	6919	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	29	-218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.3742154026618	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTGAATTCCCTGA	NA	False	NA	-37	True	AATAAA	-15	NA	30207274	30131458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162367_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.78	chr16	-	7298	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	16	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.56533775269	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGTGAATTCCCTG	NA	False	NA	-38	True	AATAAA	-14	NA	30207639	30131459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.79	chr16	-	7235	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	43	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	71.8978637344209	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGTGAATTCCCTG	NA	False	NA	-38	True	AATAAA	-14	NA	30207612	30131459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.8	chr16	-	7547	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.56533775269	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207669	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.80	chr16	-	6933	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	10	-671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8397599844785	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTAGCACCAACTGC	NA	False	NA	38	True	AATAAA	-18	NA	30207645	30131911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.81	chr16	-	6863	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-14	-675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.44721219566	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATCTTGTAGCACCAA	NA	False	NA	34	True	AATAAA	-14	NA	30207669	30131915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.82	chr16	-	6885	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	-736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.8397599844785	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGTTGTTTAAAGTTGT	NA	False	NA	-27	True	AATAAA	-26	NA	30207655	30131976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.83	chr16	-	6802	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-13	-742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTCAGGGTTGTTTAA	NA	False	NA	-33	True	AATAAA	-20	NA	30207668	30131982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162637_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.84	chr16	-	6678	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	0	-743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	72.6775840096641	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCTCAGGGTTGTTTA	NA	False	NA	-34	True	AATAAA	-19	NA	30207655	30131983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158712_30159138_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.87	chr16	-	6798	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	2	-744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	75.1396356375914	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCCCTCAGGGTTGTTT	NA	False	NA	-35	True	AATAAA	-18	NA	30207653	30131984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163391_30166447_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.88	chr16	-	6688	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	9	-746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.0719470775943	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCCTCAGGGTTGT	NA	False	NA	-37	True	AATAAA	-16	NA	30207646	30131986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.89	chr16	-	6628	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	12	-746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	72.6775840096641	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTCCCTCAGGGTTGT	NA	False	NA	-37	True	AATAAA	-16	NA	30207643	30131986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158711_30159172_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.9	chr16	-	7241	31	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.7697996020955	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207632	30131240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168590_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.90	chr16	-	6592	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-24	-750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	86.4165059464915	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTCTCCCTCAGGG	NA	False	NA	-41	True	AATAAA	-12	NA	30224817	30131990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174679_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30224572
ES.13503.91	chr16	-	6719	32	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	6	-750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	76.3719879347331	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTCTCCCTCAGGG	NA	False	NA	-41	True	AATAAA	-12	NA	30207649	30131990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174637_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.92	chr16	-	3710	8	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	18	-750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.904574428044	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTCTCCCTCAGGG	NA	False	NA	-41	True	AATAAA	-12	NA	30207637	30131990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141750_30180227_30180286_30180732_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.94	chr16	-	5411	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-125	1200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.7884909314018	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAATGAAGAAAGCAT	NA	False	NA	0	True	AATATA	-16	NA	30207473	30133175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173045_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.95	chr16	-	3808	29	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	-4659	222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	63.5848701680338	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGCCTCCAGTGAAAAT	7237	False	NA	NA	False	ATTAAA	-16	NA	30180720	30134153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631
ES.13503.96	chr16	-	4581	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	29	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.44721219566	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAGCCTCCAGTGAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	30207626	30134154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.97	chr16	-	4503	33	NNC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.8397599844785	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTCTTCATCCA	NA	False	NA	18	True	AGTAAA	-33	NA	30207655	30134351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.98	chr16	-	4366	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	52	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.44721219566	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTATTTCTTCATCCA	NA	False	NA	18	True	AGTAAA	-33	NA	30207603	30134351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162630_30163334_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13503.99	chr16	-	4421	32	NNC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	-14	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.44721219566	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATCTGGCTATTTCTT	NA	False	NA	12	True	ATTAAA	-42	NA	30207669	30134357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ES.13504.1	chr16	+	243	1	Intergenic	novelGene_11332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGTACCCTACAGTGA	NA	False	NA	NA	False	NA	NA	NA	30388818	30389061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30388800_30389100
ES.13505.1	chr16	-	3147	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	31	2	2	-2	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTCACAGTTAAGAAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	30406379	30379313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.10	chr16	-	5176	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	2	2	intron_retention	FALSE	canonical	2	298	junction_4	67.107449081471	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406379	30380186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30404499_30406255
ES.13505.11	chr16	-	2912	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	2	intron_retention	FALSE	canonical	2	298	junction_3	66.6739058569559	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406407	30380186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.13	chr16	-	3371	5	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	-3429	1	intron_retention	FALSE	canonical	3	441	junction_4	30.1029483605842	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30390356	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30384328_30386528_30388067_30388146_30388249_30389982
ES.13505.15	chr16	-	2499	15	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	26	junction_10	160.969147126183	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406406	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396616_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.17	chr16	-	7328	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	5	1	intron_retention	FALSE	canonical	2	26	junction_8	139.599103586743	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406387	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30392188_30393363_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.18	chr16	-	2369	15	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	171.034964798644	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406376	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396716_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.2	chr16	-	2735	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	30	415	1	-415	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAATTTCCAGACACA	NA	False	NA	NA	False	AATAAA	-15	NA	30406380	30379726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.20	chr16	-	2556	16	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	192.742130549833	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406400	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30395311_30395375_30396616_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.21	chr16	-	2336	15	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	172.380393316641	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406372	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396745_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.22	chr16	-	3571	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	441	junction_5	39.8807249460466	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406407	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.23	chr16	-	3053	15	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_9	198.593575332298	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406387	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30395311_30395375_30396716_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.24	chr16	-	2395	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	141.652629540088	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406378	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389859_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.25	chr16	-	3926	13	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	9	1	intron_retention	FALSE	canonical	2	9	junction_9	145.997978486766	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406372	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30392188_30393363_30393425_30399776_30399868_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.28	chr16	-	2184	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	147.265915947988	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406370	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.29	chr16	-	1957	10	NNC	ENSMUSG00000022538.21	novel	2272	14	NA	NA	-2662	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	188.359454104691	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30396723	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389859_30390355_30392010_30392188_30393363_30393425_30396616
ES.13505.3	chr16	-	2309	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	0	871	0	6	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTATTGTCTTAAGT	NA	False	NA	-2	True	ATTAAA	-20	NA	30406410	30380182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.30	chr16	-	2230	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	182.351049696578	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406372	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392064_30392188_30393363_30393425_30399776_30399864_30400873_30400979_30401348_30401470_30404371_30404499_30406255
ES.13505.31	chr16	-	2239	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	11	1	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_2	141.404158689462	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406370	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384272_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.32	chr16	-	5086	12	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	1	intron_retention	FALSE	canonical	2	298	junction_2	69.6386185250874	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATATTCTTATTGTCT	NA	False	NA	-7	True	ATTAAA	-15	NA	30406381	30380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.33	chr16	-	2334	15	NNC	ENSMUSG00000022538.21	novel	2272	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	219.776974151859	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406372	30380188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384272_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396716_30396816_30399776_30399859_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.34	chr16	-	5786	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_6	177.591779755388	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406379	30380188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389859_30390355_30392010_30392188_30393363_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.37	chr16	-	5772	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_6	206.052328621099	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406390	30380188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384272_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389859_30390355_30392010_30392188_30393363_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.39	chr16	-	3517	13	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	7	junction_2	140.51739710402	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406379	30380188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384272_30384328_30386528_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.4	chr16	-	5669	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	2	6	intron_retention	FALSE	canonical	2	26	junction_9	134.947590089656	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTATTGTCTTAAGT	NA	False	NA	-2	True	ATTAAA	-20	NA	30406379	30380182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.40	chr16	-	5023	13	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_2	190.188119590403	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTGATATTCTTATT	NA	False	NA	-11	True	ATTAAA	-11	NA	30406371	30380191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30384995_30385047_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399868_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.42	chr16	-	2133	13	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	141.593387910594	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTAGTTGATATTCTTA	NA	False	NA	-13	True	ATTAAA	-9	NA	30406372	30380193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30406255
ES.13505.43	chr16	-	2475	10	ISM	ENSMUSG00000022538.21	ENSMUST00000150499.9	2360	12	4	3352	4	-17	5prime_fragment	FALSE	canonical	3	441	junction_2	42.8174419288838	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGGCCACCACCGACC	NA	False	NA	NA	False	NA	NA	NA	30406377	30386847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.44	chr16	-	3157	1	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	-3092	-32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	30390019	30386862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30386900_30390000
ES.13505.45	chr16	-	1479	9	NNC	ENSMUSG00000022538.21	novel	2724	11	NA	NA	11	435	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	243.101701968538	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTTCAGGTCTTTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	30406370	30389753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30390355_30392010_30392188_30393363_30393425_30396716_30396816_30399776_30399868_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13505.6	chr16	-	2284	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	141.24916086047	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATTCTTATTGTCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	30406370	30380185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400979_30401348_30401470_30404371_30404499_30406255
ES.13505.7	chr16	-	3405	1	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	3336	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	5739	False	NA	-6	True	ATTAAA	-16	NA	30383591	30380186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30380200_30383600
ES.13505.8	chr16	-	3520	12	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	1629	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	189.564790816637	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30402839	30380186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389859_30390355_30392010_30392188_30393363_30393425_30399776_30399868_30400873_30400961_30401348
ES.13505.9	chr16	-	5184	13	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_7	184.362621995048	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATATTCTTATTGTCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	30406408	30380186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30380681_30383463_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396745_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ES.13506.1	chr16	+	3370	2	Genic_Genomic	ENSMUSG00000046546.4	novel	3075	1	NA	NA	-2439	13	multi-exon	FALSE	canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTACCCCAGATGATT	NA	False	NA	105	True	AATAAA	-36	NA	30416101	30421628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_30416173_30418329
ES.13506.2	chr16	+	3197	2	Genic_Genomic	ENSMUSG00000046546.4	novel	3075	1	NA	NA	-2418	-70	multi-exon	FALSE	canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTCAGTTCTGTT	NA	False	NA	22	True	TATAAA	-23	NA	30416122	30421545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_30416173_30418398
ES.13506.3	chr16	+	3226	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	-224	73	-224	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTTTCAGTTCT	NA	False	NA	19	True	TATAAA	-20	NA	30418316	30421542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_30418300_30421500
ES.13506.4	chr16	+	2918	2	Genic_Genomic	ENSMUSG00000046546.4	novel	3075	1	NA	NA	3	-70	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTCAGTTCTGTT	NA	False	NA	22	True	TATAAA	-23	NA	30418543	30421545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_30419093_30419176
ES.13506.5	chr16	+	3383	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	3	-311	3	311	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCTGCTTGCCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	30418543	30421926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_30418500_30421900
ES.13507.1	chr16	+	4331	2	Intergenic	novelGene_11333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCAGGTTTTAGAGTT	2496	False	NA	NA	False	NA	NA	NA	30513207	30518137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30513319_30513917
ES.13507.2	chr16	+	902	4	Intergenic	novelGene_11334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGTTTTAGAGTTCA	2504	False	NA	NA	False	NA	NA	NA	30513215	30518139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30513319_30513917_30514223_30515612_30515692_30517724
ES.13507.3	chr16	+	4756	1	Intergenic	novelGene_11335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCAGGTTTTAGAGTT	2670	False	NA	NA	False	NA	NA	NA	30513381	30518137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30513400_30518100
ES.13507.4	chr16	+	2922	6	Intergenic	novelGene_11336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2690	False	NA	NA	False	NA	NA	NA	30513401	30529489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30513498_30513917_30514223_30519252_30519343_30519420_30521670_30529103_30529179_30529382
ES.13508.1	chr16	+	2860	1	Intergenic	novelGene_11337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTTTCCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	30650398	30653258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30650400_30653300
ES.13508.2	chr16	+	185	1	Intergenic	novelGene_11338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGATATTTTAATAGA	NA	False	NA	NA	False	NA	NA	NA	30650790	30650975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30650800_30651000
ES.13509.1	chr16	-	188	1	Intergenic	novelGene_11339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAAGAGTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	30663670	30663482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30663500_30663700
ES.1351.1	chr1	+	6721	11	NIC	ENSMUSG00000041757.18	novel	1156	10	NA	NA	-181	-3041	intron_retention	FALSE	canonical	0	0	junction_1	10.9840793879141	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCGCTCCGACACCT	7608	False	NA	NA	False	ATTAAA	-15	NA	133091766	133206508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133092279_133097750_133097828_133101486_133101545_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595
ES.1351.10	chr1	+	6813	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23353	2	intron_retention	FALSE	canonical	0	0	junction_10	7.99929108390178	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCGTTGTCTCTCCTTT	183	False	NA	NA	False	AAGAAA	-19	NA	133132411	133229227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.11	chr1	+	4864	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23355	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.28832196477282	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACTAGTGAAGCAC	185	False	NA	NA	False	AGTAAA	-16	NA	133132413	133228951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.12	chr1	+	5002	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23364	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.92879464351643	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATACTAGTGAAGCACT	194	False	NA	NA	False	AGTAAA	-17	NA	133132422	133228952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.13	chr1	+	6925	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23364	-298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.92879464351643	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTATGCTCTCAGTGTC	194	False	NA	NA	False	AATAAA	-11	NA	133132422	133230875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.14	chr1	+	5246	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	64	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	9.03720518217474	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTTTGCCTCCCC	195	False	NA	NA	False	AATACA	-13	NA	133132423	133229289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133203549_133203604_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.15	chr1	+	2029	9	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	2295	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	3.26917420765551	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGAGGACTCAGATTG	195	False	NA	NA	False	NA	NA	NA	133132423	133202367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595
ES.1351.16	chr1	+	4992	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	6.85384611817119	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAAATACTAGTGAAGC	195	False	NA	NA	False	AGTAAA	-14	NA	133132423	133228949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.17	chr1	+	4767	22	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	7.51808100183241	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACTAGTGAAGCAC	195	False	NA	NA	False	AGTAAA	-16	NA	133132423	133228951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.18	chr1	+	5256	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	-61	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	7.12056734669668	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGCCTCCCCACCAC	195	False	NA	NA	False	AATACA	-18	NA	133132423	133229294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.19	chr1	+	5249	22	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23365	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	5.61864405330436	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCTTAATATATGTTT	195	False	NA	NA	False	CATAAA	-23	NA	133132423	133229356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.2	chr1	+	7404	25	NIC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	-180	-302	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.42366996215145	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATCTATGCTCTCAG	7609	False	NA	NA	False	AATAAA	-7	NA	133091767	133230871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133092279_133097750_133097828_133101486_133101545_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.20	chr1	+	5095	25	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23366	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.92406235348504	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	196	False	NA	NA	False	AGTAAA	-22	NA	133132424	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.21	chr1	+	5098	21	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23370	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	6.08687111741328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCTTAATATATGTTT	200	False	NA	NA	False	CATAAA	-23	NA	133132428	133229356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.22	chr1	+	4780	22	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23373	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	6.63974154620897	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTGAAGCACTCTC	203	False	NA	NA	False	AGTAAA	-20	NA	133132431	133228955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.23	chr1	+	4632	21	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23374	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	7.07018387313937	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTAGTGAAGCACTCT	204	False	NA	NA	False	AGTAAA	-19	NA	133132432	133228954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.24	chr1	+	5268	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23385	31	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	7.82359749002659	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTCATAGTATCCATG	215	False	NA	NA	False	AATATA	-16	NA	133132443	133229386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.25	chr1	+	4919	21	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23421	63	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	7.07018387313937	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGTCTTTGCCTCCC	251	False	NA	NA	False	AATACA	-12	NA	133132479	133229288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.26	chr1	+	5068	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	28842	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.27222775714715	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	5243	False	NA	NA	False	AGTAAA	-22	NA	133137900	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133138128_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.27	chr1	+	4772	22	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	-19283	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.24811336778684	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACTAGTGAAGCAC	NA	False	NA	NA	False	AGTAAA	-16	NA	133154551	133228951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133154576_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.28	chr1	+	5199	22	NIC	ENSMUSG00000041757.18	novel	7388	27	NA	NA	-105	63	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	7.97700777617927	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGTCTTTGCCTCCC	5269	False	NA	NA	False	AATACA	-12	NA	133186641	133229288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.29	chr1	+	5014	23	NIC	ENSMUSG00000041757.18	novel	7388	27	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.0765961245241	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	5270	False	NA	NA	False	AGTAAA	-22	NA	133186642	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.3	chr1	+	5389	24	NIC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.67236010943243	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	7620	False	NA	NA	False	AGTAAA	-22	NA	133091778	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133092279_133097750_133097828_133101486_133101545_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.30	chr1	+	4514	20	NIC	ENSMUSG00000041757.18	novel	7388	27	NA	NA	-4760	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	8.51135789967728	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	NA	False	NA	NA	False	AGTAAA	-22	NA	133192433	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.31	chr1	+	5114	12	ISM	ENSMUSG00000041757.18	ENSMUST00000190186.7	4492	17	9993	-1944	7956	-4	3prime_fragment	FALSE	canonical	3	14	junction_11	5.36594711395407	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGTGTGTGTGTGTCC	5254	False	NA	NA	False	AATAAA	-15	NA	133209947	133231169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.32	chr1	+	5237	2	FSM	ENSMUSG00000041757.18	ENSMUST00000190208.2	3002	2	-2234	-1	-2234	1	multi-exon	FALSE	canonical	3	14	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCTTAATATATGTTT	410	False	NA	NA	False	CATAAA	-23	NA	133223454	133229356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133226782_133227446
ES.1351.4	chr1	+	5034	24	NIC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	5808	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.44530943292011	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	5464	False	NA	NA	False	AGTAAA	-22	NA	133097755	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133097828_133101486_133101545_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.5	chr1	+	4995	22	NIC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	6.8614404522203	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	700	False	NA	NA	False	AGTAAA	-22	NA	133109097	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133109339_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.6	chr1	+	4747	21	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23322	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	6.08687111741328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGCACTCTCTG	152	False	NA	NA	False	AGTAAA	-22	NA	133132380	133228957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.7	chr1	+	7170	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23325	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.12504953003653	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGGTGTGTGTGTGTC	155	False	NA	NA	False	AATAAA	-14	NA	133132383	133231168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132516_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133226657_133226782_133227446
ES.1351.8	chr1	+	5376	24	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23332	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.92879464351643	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGCCTCCCCACCAC	162	False	NA	NA	False	AATACA	-18	NA	133132390	133229294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197737_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.1351.9	chr1	+	3810	23	NNC	ENSMUSG00000041757.18	novel	4820	22	NA	NA	23333	-1078	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	7.82359749002659	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTACAACACAGCGAGAG	163	False	NA	NA	False	NA	NA	NA	133132391	133227876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133132520_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ES.13510.1	chr16	-	3511	1	Intergenic	novelGene_11340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTACCTTACCTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	30673871	30670360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30670400_30673900
ES.13511.1	chr16	-	182	1	ISM	ENSMUSG00000116951.2	ENSMUST00000231571.2	805	3	1499	0	866	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTT	5910	False	NA	NA	False	NA	NA	NA	30688043	30687861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30687900_30688000
ES.13512.1	chr16	-	3525	1	Antisense	novelGene_ENSMUSG00000116737.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	30697188	30693663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_30693700_30697200
ES.13513.1	chr16	+	200	1	Intergenic	novelGene_11341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTCACTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	30704689	30704889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30704700_30704900
ES.13514.1	chr16	-	3298	1	Intergenic	novelGene_11342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAATTAAGTCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	30761735	30758437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30758400_30761700
ES.13515.1	chr16	-	1709	4	NNC	ENSMUSG00000047434.15	novel	407	3	NA	NA	54	3630	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6483308118065	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGACATTGTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	30900196	30770331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30771216_30826531_30826665_30869449_30869598_30899652
ES.13515.10	chr16	-	3044	5	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	924	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.8228507383694	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTACAGTGTCT	NA	False	NA	-13	True	ATTAAA	-4	NA	30887720	30773969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30868719_30868826_30869449_30869598_30887646
ES.13515.11	chr16	-	3280	3	NIC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	41	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	73.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTCCAAAGCTA	NA	False	NA	-21	True	NA	NA	NA	30900209	30773977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30776553_30869449_30869598_30899652
ES.13515.12	chr16	-	6029	4	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	7076	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1380544648736	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-45	True	NA	NA	NA	30873169	30774001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30869449_30869598_30869972
ES.13515.13	chr16	-	3268	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	8	194	8	-194	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCTTGACGGTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	30900242	30774155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ES.13515.14	chr16	-	2992	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	1	477	1	-477	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCCTTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	30900249	30774438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ES.13515.15	chr16	-	2503	3	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	53075	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.5	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTGTATTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	30827170	30774447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30826905
ES.13515.17	chr16	-	5091	4	Fusion	ENSMUSG00000087605.2_ENSMUSG00000047434.15	novel	407	3	NA	NA	62	3727	multi-exon	FALSE	canonical	0	0	junction_1	66.6483308118065	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAACTAGCCAAACAGAA	NA	False	NA	NA	False	AAAAAG	-23	NA	30900188	30784483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_30788758_30826531_30826665_30869449_30869598_30899652
ES.13515.2	chr16	-	183	1	Intergenic	novelGene_11343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	30772776	30772593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_30772600_30772800
ES.13515.3	chr16	-	3818	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	27	-375	27	375	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	30900223	30773586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ES.13515.4	chr16	-	3831	4	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	66	375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1380544648736	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	30900184	30773586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30869449_30869598_30899600
ES.13515.5	chr16	-	3482	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	-9	-3	-9	3	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTTCTGTTATTCA	NA	False	NA	-2	True	ATTAAA	-15	NA	30900259	30773958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ES.13515.6	chr16	-	2790	3	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	53037	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.5	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACAGTGTCTTCTGTTAT	NA	False	NA	-5	True	ATTAAA	-12	NA	30827208	30773961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30827142
ES.13515.7	chr16	-	2854	3	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	53204	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.5	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGCTACAGTGTCTTC	NA	False	NA	-11	True	ATTAAA	-6	NA	30827041	30773967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30776553_30826531_30826665_30826905
ES.13515.8	chr16	-	3100	5	NNC	ENSMUSG00000047434.15	novel	3470	4	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.8869623034225	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGCTACAGTGTCTTC	NA	False	NA	-11	True	ATTAAA	-6	NA	30900249	30773967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30774137_30774499_30776553_30826531_30826665_30869449_30869598_30899652
ES.13516.1	chr16	+	264	1	Intergenic	novelGene_11344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATCCTGAAATATTC	NA	False	NA	NA	False	ATTAAA	-41	NA	30954820	30955084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30954800_30955100
ES.13517.1	chr16	+	2648	1	Antisense	novelGene_ENSMUSG00000049076.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTTTTTCTTGTATCC	NA	False	NA	NA	False	NA	NA	NA	30958644	30961292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_30958600_30961300
ES.13518.1	chr16	+	141	1	Intergenic	novelGene_11345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	30982751	30982892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_30982800_30982900
ES.13519.1	chr16	-	6607	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-184	-3009	-101	5	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGTGCTCCAGCTCCTT	NA	False	NA	-15	True	AATAAA	-26	NA	31020164	30911224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.11	chr16	-	6549	24	FSM	ENSMUSG00000049076.13	ENSMUST00000229010.3	2810	24	-200	-3539	-28	0	multi-exon	FALSE	canonical	0	0	junction_6	43.8196596391217	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCTGTAAGTGCTCC	NA	False	NA	-23	True	AATAAA	-18	NA	31020009	30911232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926345_30926451_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.14	chr16	-	6786	1	NIC	ENSMUSG00000049076.13	novel	6515	23	NA	NA	-2469	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTGCTGTAAGTGCTC	NA	False	NA	-24	True	AATAAA	-17	NA	30918019	30911233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30911200_30918000
ES.13519.16	chr16	-	6186	20	NIC	ENSMUSG00000049076.13	novel	2810	24	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	55.8819987467657	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTTGCTGTAAGTGCT	NA	False	NA	-25	True	AATAAA	-16	NA	31020020	30911234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926345_30926451_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.18	chr16	-	5858	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-111	-2333	-28	-668	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCACCATTTATTACCC	NA	False	NA	NA	False	AATAAA	-20	NA	31020091	30911900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.19	chr16	-	3820	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-71	-335	12	335	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGAGCTTTACTTGAAT	NA	False	NA	NA	False	AGTAAA	-24	NA	31020051	30913898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.20	chr16	-	3852	23	NNC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	-4	332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1941633033981	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATAGAGCTTTACTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	31020067	30913901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30915265_30920644_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946117_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.21	chr16	-	3645	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-138	-93	-55	93	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATTATGCACATGTG	NA	False	NA	NA	False	NA	NA	NA	31020118	30914140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.23	chr16	-	3447	22	NIC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	34.8262939213939	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTTGTGTACTATAC	NA	False	NA	NA	False	AATAAA	-21	NA	31020069	30914231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_31019756
ES.13519.24	chr16	-	3515	23	NNC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	34.248152510949	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTTGTGTACTATAC	NA	False	NA	NA	False	AATAAA	-21	NA	31020058	30914231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946117_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.27	chr16	-	3214	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-19	219	-18	181	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTATTGCAAAATTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	31019999	30914452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.28	chr16	-	2886	24	FSM	ENSMUSG00000049076.13	ENSMUST00000229010.3	2810	24	-200	124	-28	-124	multi-exon	FALSE	canonical	0	0	junction_6	43.8196596391217	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGTTCTGAGGTGCT	NA	False	NA	NA	False	TATAAA	-16	NA	31020009	30914895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926345_30926451_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.29	chr16	-	4455	1	NIC	ENSMUSG00000049076.13	novel	6515	23	NA	NA	-12895	-11950	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATTTTATAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	30936596	30932141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30932100_30936600
ES.13519.3	chr16	-	6272	22	NNC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	45.104112366623	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAAGTGCTCCAGCTCC	NA	False	NA	-17	True	AATAAA	-24	NA	31019999	30911226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928563_30929816_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958292_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.30	chr16	-	3923	2	ISM	ENSMUSG00000049076.13	ENSMUST00000231125.2	2334	24	82595	16978	-13513	-11950	internal_fragment	FALSE	canonical	3	158	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATTTTATAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	30937214	30932141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30934926_30936075
ES.13519.31	chr16	-	863	4	ISM	ENSMUSG00000049076.13	ENSMUST00000231125.2	2334	24	-220	57002	34	-51974	5prime_fragment	FALSE	canonical	3	143	junction_2	7.25718035235908	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTGTGTCATTTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	31020029	30972165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.5	chr16	-	6559	23	NNC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	34.248152510949	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAAGTGCTCCAGCTCC	NA	False	NA	-17	True	AATAAA	-24	NA	31020097	30911226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946117_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.13519.7	chr16	-	6235	20	NIC	ENSMUSG00000049076.13	novel	6515	23	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	36.4172495732722	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTAAGTGCTCCAGC	NA	False	NA	-20	True	AATAAA	-21	NA	31020029	30911229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_31019756
ES.13519.9	chr16	-	6045	19	NNC	ENSMUSG00000049076.13	novel	3414	23	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.5056113542248	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTGTAAGTGCTCCAG	NA	False	NA	-21	True	AATAAA	-20	NA	31020058	30911230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_30915265_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946117_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ES.1352.1	chr1	-	153	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	133120066	133119913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133119900_133120100
ES.13520.1	chr16	+	175	1	Intergenic	novelGene_11346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	31024834	31025009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31024800_31025000
ES.13521.1	chr16	-	5533	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	54	-1509	54	1509	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACAGCACTTTTCAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	31094041	31068845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.10	chr16	-	2676	1	NIC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	19087	-1693	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	6678	False	NA	-14	True	AATAAA	-16	NA	31074723	31072047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31072000_31074700
ES.13521.11	chr16	-	2380	7	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	111	-1693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	494.588605700626	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	NA	False	NA	-14	True	AATAAA	-16	NA	31093984	31072047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31073552_31075807_31075914_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.12	chr16	-	2280	7	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	47	-1694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	384.376443086722	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTGTTAGAAGAATGT	NA	False	NA	-15	True	AATAAA	-15	NA	31094048	31072048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663_31093811_31093867
ES.13521.14	chr16	-	1648	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-68	2498	-68	-2498	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTCTGCTTGTCTTCG	NA	False	NA	-6	True	AATAAA	-37	NA	31094163	31072852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.15	chr16	-	1390	5	NIC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	22	-2498	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	461.647254405352	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTCTGCTTGTCTTCG	NA	False	NA	-6	True	AATAAA	-37	NA	31094073	31072852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31073552_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.16	chr16	-	4571	5	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	-134	-2499	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	461.647254405352	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTCTGCTTGTCTTC	NA	False	NA	-7	True	AATAAA	-36	NA	31093944	31072853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31075804_31078332_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.17	chr16	-	5144	5	NNC	ENSMUSG00000047714.15	novel	958	5	NA	NA	21	-2508	intron_retention	FALSE	canonical	0	0	junction_3	451.608998471023	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACTGACACCTGCTCTG	NA	False	NA	-16	True	AATAAA	-27	NA	31094074	31072862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31077323_31079391_31079487_31080047_31080118_31084122_31084231_31093663
ES.13521.18	chr16	-	7191	4	NIC	ENSMUSG00000047714.15	novel	958	5	NA	NA	-5	-2564	intron_retention	FALSE	canonical	3	1045	junction_3	15.6914697279198	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTCCCCCATTCCCAC	NA	False	NA	-6	True	AATAAA	-16	NA	31094100	31072918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.19	chr16	-	1247	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	54	2777	54	-2777	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTCATTTCTTCT	NA	False	NA	NA	False	TATAAA	-13	NA	31094041	31073131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.2	chr16	-	4084	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-6	0	-6	0	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCTTTTTAATTA	NA	False	NA	3	True	ATTAAA	-28	NA	31094101	31070354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.20	chr16	-	5562	1	NIC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	14799	-3095	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTTCTTGTTCTCTA	2390	False	NA	-4	True	AATACA	-18	NA	31079011	31073449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31073400_31079000
ES.13521.21	chr16	-	963	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	17	3098	17	-3098	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACACTGTTTCTTGTTCT	NA	False	NA	-7	True	AATACA	-15	NA	31094078	31073452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.22	chr16	-	1953	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-205	-790	80	790	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTAGTAATTAATTGT	NA	False	NA	NA	False	NA	NA	NA	31094015	31076002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.23	chr16	-	1179	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	-294	73	-9	-73	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTTGCTTTT	NA	False	NA	0	True	ATTAAA	-21	NA	31094104	31076865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.24	chr16	-	3201	1	Genic_Genomic	ENSMUSG00000047714.15	novel	NA	NA	NA	NA	-9	-14111	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTATATAACTCAAGCT	NA	False	NA	NA	False	NA	NA	NA	31094104	31090903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_31090900_31094100
ES.13521.3	chr16	-	3105	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	24	949	24	-949	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGGGAAGATGGCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	31094071	31071303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.4	chr16	-	2970	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-9	1117	-9	-1117	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTTCGTGTTTTCTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	31094104	31071471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.5	chr16	-	2884	6	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	56	-1125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	480.368858274556	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTGATTCTTCGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	31094039	31071479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31073552_31077154_31077318_31079391_31079487_31080047_31080118_31084122_31084231_31093663
ES.13521.6	chr16	-	2654	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-9	1433	-9	-1433	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTATCATTGTG	NA	False	NA	NA	False	NA	NA	NA	31094104	31071787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.7	chr16	-	5388	1	NIC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	16596	-1472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTCTGCTTTTAGTTTT	4187	False	NA	NA	False	NA	NA	NA	31077214	31071826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31071800_31077200
ES.13521.8	chr16	-	2436	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	-34	1676	-34	-1676	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTATTTTGAATGTCTT	NA	False	NA	3	True	AATAAA	-33	NA	31094129	31072030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ES.13521.9	chr16	-	2286	5	NIC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	-9	-1693	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	417.507784358567	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	NA	False	NA	-14	True	AATAAA	-16	NA	31094104	31072047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31093663
ES.13522.1	chr16	-	824	1	Intergenic	novelGene_11347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGCCACTCTCTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	31102131	31101307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31101300_31102100
ES.13523.1	chr16	+	195	1	Intergenic	novelGene_11348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGGCGGGGTTCCTAA	NA	False	NA	NA	False	AAAAAG	-5	NA	31121653	31121848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31121700_31121800
ES.13524.1	chr16	-	1573	5	Fusion	ENSMUSG00000022548.15_ENSMUSG00000116617.2	novel	362	2	NA	NA	48	-1387	multi-exon	FALSE	canonical	2	3	junction_1	63.3423239232663	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACTGGGATTGAAAA	8758	False	NA	NA	False	NA	NA	NA	31133364	31104628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_31105692_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ES.13524.2	chr16	-	988	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	27	-36	27	2	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTTCCTGTGGATT	8737	False	NA	-2	True	AATAAA	-14	NA	31133385	31115937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ES.13524.3	chr16	-	3327	3	FSM	ENSMUSG00000022548.15	ENSMUST00000155682.2	422	3	-2512	-393	-2512	2	multi-exon	FALSE	canonical	3	168	junction_1	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTTCCTGTGGATT	NA	False	NA	-2	True	AATAAA	-14	NA	31125008	31115937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31116395_31119212_31119302_31122227
ES.13525.1	chr16	+	4178	2	Intergenic	novelGene_11349	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	31199940	31204566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31203779_31204226
ES.13526.1	chr16	+	1669	7	FSM	ENSMUSG00000046598.16	ENSMUST00000089759.9	1711	7	43	-1	43	1	multi-exon	FALSE	canonical	2	4	junction_1	185.763888369678	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTGTGCATGAAAG	5552	False	NA	26	True	AGTAAA	-16	NA	31241140	31276316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31241331_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.10	chr16	+	1403	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	42	1677	-2	2	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTTCAATGTGGTGAAT	NA	False	NA	12	True	NA	NA	NA	31247607	31276042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.12	chr16	+	2719	2	FSM	ENSMUSG00000046598.16	ENSMUST00000128286.2	438	2	59	-2340	19	2340	multi-exon	FALSE	canonical	3	496	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTAAAATACTTCTAC	NA	False	NA	NA	False	NA	NA	NA	31247628	31259351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809
ES.13526.14	chr16	+	1525	6	NNC	ENSMUSG00000046598.16	novel	3122	7	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	202.844373843595	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31247638	31276315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31247806_31256809_31256936_31265409_31265459_31268626_31268784_31273845_31273999_31275442
ES.13526.17	chr16	+	3137	7	NNC	ENSMUSG00000046598.16	novel	1496	7	NA	NA	-247	1	intron_retention	FALSE	canonical	1	2	junction_1	186.505585260424	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCAGAGTGGCTTGGAATT	NA	False	NA	18	True	AATAAA	-18	NA	31247869	31277720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31248124_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.18	chr16	+	206	1	Intergenic	novelGene_11352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGATGTTATTTGTAC	NA	False	NA	NA	False	AAGAAA	-11	NA	31249550	31249756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31249600_31249800
ES.13526.19	chr16	+	1354	5	ISM	ENSMUSG00000046598.16	ENSMUST00000149039.2	807	7	10499	-747	10499	0	3prime_fragment	FALSE	canonical	3	475	junction_2	21.3585462988472	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31265407	31276315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.2	chr16	+	3050	7	FSM	ENSMUSG00000046598.16	ENSMUST00000089759.9	1711	7	61	-1400	61	0	multi-exon	FALSE	canonical	2	4	junction_1	185.763888369678	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCGCAGAGTGGCTTG	5570	False	NA	13	True	AATAAA	-13	NA	31241158	31277715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31241331_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.20	chr16	+	2679	4	ISM	ENSMUSG00000046598.16	ENSMUST00000149039.2	807	7	11461	-2146	-10564	-1	3prime_fragment	FALSE	canonical	3	475	junction_1	24.4994331000173	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACTCGCAGAGTGGCTT	NA	False	NA	12	True	AATAAA	-12	NA	31266369	31277714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.3	chr16	+	132	1	Intergenic	novelGene_11351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31246132	31246264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31246100_31246300
ES.13526.4	chr16	+	1939	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	-178	1361	-178	43	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGACACCTCTTTCATT	NA	False	NA	68	True	NA	NA	NA	31247387	31276358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.5	chr16	+	3289	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	-162	-5	-162	5	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGCTTGGAATTACAC	NA	False	NA	22	True	AATAAA	-22	NA	31247403	31277724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.6	chr16	+	1774	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	-150	1498	-150	-94	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAATCATTTTCCAG	NA	False	NA	18	True	NA	NA	NA	31247415	31276221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13526.7	chr16	+	1536	8	NNC	ENSMUSG00000046598.16	novel	3162	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	222.521175328075	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTTCAATGTGGTGAAT	NA	False	NA	12	True	NA	NA	NA	31247581	31276042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31274667_31274775_31275442
ES.13526.8	chr16	+	2953	6	NIC	ENSMUSG00000046598.16	novel	3122	7	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_5	195.878125373917	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247581	31277719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31275442
ES.13526.9	chr16	+	2020	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	42	1060	-2	344	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTGTCCGGCTAAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	31247607	31276659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ES.13527.1	chr16	-	241	1	Intergenic	novelGene_11350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCCTGGCTCTGCGT	NA	False	NA	NA	False	NA	NA	NA	31241975	31241734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31241700_31242000
ES.13528.1	chr16	-	179	1	Intergenic	novelGene_11353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTCCCCCTTCCCTA	NA	False	NA	NA	False	NA	NA	NA	31262208	31262029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31262000_31262200
ES.13529.1	chr16	-	177	1	Intergenic	novelGene_11354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCTTAACT	NA	False	NA	NA	False	NA	NA	NA	31391120	31390943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31390900_31391100
ES.1353.1	chr1	+	747	3	NNC	ENSMUSG00000116158.2	novel	496	2	NA	NA	-842	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	8012	False	NA	4	True	AATAAA	-16	NA	133254107	133257460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133254282_133254872_133255079_133257093
ES.13530.1	chr16	+	4407	25	NIC	ENSMUSG00000022770.18	novel	6143	26	NA	NA	-75	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	80.4732421885271	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAAATGTGTCTTGAAT	NA	False	NA	21	True	AATAAA	-19	NA	31482185	31692169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31482307_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.10	chr16	+	4388	25	NNC	ENSMUSG00000022770.18	novel	4711	26	NA	NA	-59	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.4732421885271	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482667	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482767_31483634_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.101	chr16	+	4756	17	ISM	ENSMUSG00000022770.18	ENSMUST00000115201.8	3248	27	240	31005	-1	-1977	5prime_fragment	FALSE	canonical	1	100	junction_1	68.1886170852584	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTATCCAGAAATCAAAT	NA	False	NA	NA	False	AATAAA	-6	NA	31482966	31659659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867
ES.13530.104	chr16	+	4335	24	ISM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	1534	-3	1423	0	3prime_fragment	FALSE	canonical	3	173	junction_4	58.3183687709615	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31484390	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.105	chr16	+	4170	23	ISM	ENSMUSG00000022770.18	ENSMUST00000023454.12	3725	25	1423	-665	1423	0	3prime_fragment	FALSE	canonical	2	12	junction_15	96.9546200400344	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31484390	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.107	chr16	+	217	1	Intergenic	novelGene_11355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTTAGAAGGACAGTTAA	NA	False	NA	NA	False	AAAAAG	-10	NA	31501589	31501806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31501600_31501800
ES.13530.108	chr16	+	4087	23	NIC	ENSMUSG00000022770.18	novel	3725	25	NA	NA	-141	-4	combination_of_known_junctions	FALSE	canonical	3	3	junction_15	103.450441283026	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31502942	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.109	chr16	+	4264	22	NIC	ENSMUSG00000022770.18	novel	3418	23	NA	NA	270	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	84.2222790611215	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTTAAATGTGTCTT	NA	False	NA	17	True	AATAAA	-15	NA	31573437	31692165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31573835_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.11	chr16	+	4689	25	FSM	ENSMUSG00000022770.18	ENSMUST00000023454.12	3725	25	-298	-666	-57	1	multi-exon	FALSE	canonical	1	12	junction_17	99.2697993125581	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482669	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.110	chr16	+	5398	1	NIC	ENSMUSG00000022770.18	novel	6143	26	NA	NA	14070	30	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAGGCTATGTATAC	NA	False	NA	NA	False	NA	NA	NA	31587237	31592635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31587200_31592600
ES.13530.111	chr16	+	3994	21	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	17272	-4	combination_of_known_junctions	FALSE	canonical	3	117	junction_13	64.4532970452249	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31590439	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.112	chr16	+	3493	17	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_3	73.469567466741	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31610531	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.113	chr16	+	5040	13	ISM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	146556	-3	-18704	0	3prime_fragment	FALSE	canonical	3	175	junction_5	48.96505273038	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31629412	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.114	chr16	+	3749	1	Intergenic	novelGene_11358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31649978	31653727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31650000_31653700
ES.13530.115	chr16	+	6325	6	NIC	ENSMUSG00000022770.18	novel	3418	23	NA	NA	-121	1	intron_retention	FALSE	canonical	3	15	junction_1	134.73470228564	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	1833	False	NA	20	True	AATAAA	-18	NA	31666019	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31666488_31672660_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.116	chr16	+	7362	4	NIC	ENSMUSG00000022770.18	novel	3418	23	NA	NA	-1070	1	intron_retention	FALSE	canonical	3	327	junction_3	24.2807651352991	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	7212	False	NA	20	True	AATAAA	-18	NA	31671398	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.117	chr16	+	5824	6	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-834	0	intron_retention	FALSE	canonical	3	298	junction_1	28.0813105107294	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATATGTTAAATGTGTCT	7448	False	NA	16	True	AATAAA	-14	NA	31671634	31692164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.118	chr16	+	3727	4	NIC	ENSMUSG00000022770.18	novel	3418	23	NA	NA	1476	0	intron_retention	FALSE	canonical	3	327	junction_3	24.2807651352991	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAGAAAAATA	9758	False	NA	NA	False	ATTAAA	-15	NA	31673944	31691079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.119	chr16	+	3322	1	NIC	ENSMUSG00000022770.18	novel	6143	26	NA	NA	2539	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31688838	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31688800_31692200
ES.13530.12	chr16	+	4644	25	NIC	ENSMUSG00000022770.18	novel	4545	25	NA	NA	-57	1	combination_of_known_junctions	FALSE	canonical	1	12	junction_17	102.340899557421	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482669	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.14	chr16	+	4805	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.1576052817719	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482673	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.15	chr16	+	3563	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	89.9820608040327	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAGAAAAATA	NA	False	NA	NA	False	ATTAAA	-15	NA	31482673	31691079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.16	chr16	+	4175	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-52	91	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTAACTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	31482674	31691593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.18	chr16	+	3677	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-50	21	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.0681462806789	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTATTTCAAAATTAAT	NA	False	NA	NA	False	ATTAAA	-36	NA	31482676	31691100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.2	chr16	+	4319	25	NNC	ENSMUSG00000022770.18	novel	6143	26	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_1	76.6066794302777	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482231	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482266_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.20	chr16	+	4775	26	FSM	ENSMUSG00000022770.18	ENSMUST00000100001.10	4711	26	-72	8	-46	-1	multi-exon	FALSE	canonical	1	12	junction_18	97.7523401254415	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTTAAATGTGTCTTG	NA	False	NA	18	True	AATAAA	-16	NA	31482680	31692166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.22	chr16	+	4217	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-43	91	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.3517753559143	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTAACTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	31482683	31691593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.25	chr16	+	4171	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-40	3	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTAACTATGGGAATTA	NA	False	NA	NA	False	ACTAAA	-1	NA	31482686	31691505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.27	chr16	+	4617	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.943980386268	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31482689	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482931_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.28	chr16	+	4311	25	NNC	ENSMUSG00000022770.18	novel	3725	25	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.833212209242	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482689	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482737_31483039_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.29	chr16	+	4848	27	NNC	ENSMUSG00000022770.18	novel	3248	27	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.293247780242	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482691	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483139_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31673485_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.3	chr16	+	4768	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-82	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_19	102.564446081476	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTTAAATGTGTCTT	NA	False	NA	17	True	AATAAA	-15	NA	31482644	31692165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.30	chr16	+	4652	25	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.4732421885271	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482691	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483056_31483634_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.31	chr16	+	3617	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	18	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.3319772338318	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGATTTATTTCAAAATT	NA	False	NA	NA	False	ATTAAA	-33	NA	31482691	31691097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.32	chr16	+	3428	23	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	540	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	74.0516906799702	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCTCAATGAGTCTAA	NA	False	NA	NA	False	AATAAA	-21	NA	31482691	31682566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990
ES.13530.34	chr16	+	4632	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-35	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	89.9820608040327	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTTAAATGTGTCTTG	NA	False	NA	18	True	AATAAA	-16	NA	31482691	31692166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.36	chr16	+	4512	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	90.0089052515065	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATATGTTAAATGTGTC	NA	False	NA	15	True	AATAAA	-13	NA	31482697	31692163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.39	chr16	+	3002	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-28	64	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	73.8822442224257	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCATGTAAGTGTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	31482698	31682090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990
ES.13530.4	chr16	+	4733	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-80	1	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.3319772338318	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482646	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.40	chr16	+	4708	26	NNC	ENSMUSG00000022770.18	novel	4711	26	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	109.482316380318	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTTAAATGTGTCTT	NA	False	NA	17	True	AATAAA	-15	NA	31482698	31692165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624434_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.41	chr16	+	4688	15	ISM	ENSMUSG00000022770.18	ENSMUST00000115201.8	3248	27	-28	39707	-28	-4352	5prime_fragment	FALSE	canonical	1	100	junction_1	65.6369498352374	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTCTGTGTGACAC	NA	False	NA	NA	False	AATAAA	-36	NA	31482698	31650957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283
ES.13530.44	chr16	+	4210	24	NNC	ENSMUSG00000022770.18	novel	3248	27	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4671228099567	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482699	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482728_31484400_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.45	chr16	+	3703	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-22	18	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.1576052817719	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGATTTATTTCAAAATT	NA	False	NA	NA	False	ATTAAA	-33	NA	31482704	31691097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.47	chr16	+	4721	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.342648271872	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATATGTTAAATGTGTC	NA	False	NA	15	True	AATAAA	-13	NA	31482723	31692163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483139_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31636786_31636816_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.51	chr16	+	2991	6	ISM	ENSMUSG00000022770.18	ENSMUST00000115201.8	3248	27	-3	98029	-3	30	5prime_fragment	FALSE	canonical	1	100	junction_1	82.9047646399168	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAGGCTATGTATAC	NA	False	NA	NA	False	NA	NA	NA	31482723	31592635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574
ES.13530.54	chr16	+	2879	23	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	68	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	78.9142227070288	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATGTAAGTGTAAATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	31482723	31682094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990
ES.13530.56	chr16	+	4059	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.4427446961725	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAAACTTTCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	31482728	31691481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483139_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.57	chr16	+	4805	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.943980386268	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGTCTTGAATT	NA	False	NA	22	True	AATAAA	-20	NA	31482731	31692170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483139_31483626_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.58	chr16	+	3533	24	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.7997562839657	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAGAAAAATA	NA	False	NA	NA	False	ATTAAA	-15	NA	31482749	31691079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483141_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.60	chr16	+	4750	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.6548995136822	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31482760	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483137_31483636_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631647_31648291_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.61	chr16	+	3535	16	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	107.013187141689	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482760	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.62	chr16	+	3612	26	FSM	ENSMUSG00000022770.18	ENSMUST00000100001.10	4711	26	10	1089	10	6	multi-exon	FALSE	canonical	1	12	junction_18	97.7523401254415	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGAAAAATAGGGATT	NA	False	NA	NA	False	ATTAAA	-21	NA	31482762	31691085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.64	chr16	+	4698	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_19	99.757353613656	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482762	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.65	chr16	+	4794	27	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.943894826064	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAAATCCATATGTTAAA	NA	False	NA	9	True	AATAAA	-7	NA	31482763	31692157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31566777_31566826_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.67	chr16	+	3944	19	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.0623111582719	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482763	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31609088_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.68	chr16	+	3102	23	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-8	540	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	103.785140419526	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCTCAATGAGTCTAA	NA	False	NA	NA	False	AATAAA	-21	NA	31482764	31682566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31682302
ES.13530.7	chr16	+	3787	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	-191	1067	-61	18	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGATTTATTTCAAAATT	NA	False	NA	NA	False	ATTAAA	-33	NA	31482665	31691097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.76	chr16	+	4778	27	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_20	100.704184819881	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTTAAATGTGTCTT	NA	False	NA	17	True	AATAAA	-15	NA	31482775	31692165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.77	chr16	+	4880	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	13	-1	intron_retention	FALSE	canonical	1	100	junction_1	66.9288480360516	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTTAAATGTGTCTTG	NA	False	NA	18	True	AATAAA	-16	NA	31482785	31692166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.78	chr16	+	4489	27	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.136120119863	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATATGTTAAATGTGTC	NA	False	NA	15	True	AATAAA	-13	NA	31482786	31692163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31482839_31483076_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676711_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.8	chr16	+	4761	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-61	3	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGTCTTGAATT	NA	False	NA	22	True	AATAAA	-20	NA	31482665	31692170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.80	chr16	+	4809	27	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	100.038720314337	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482789	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31677245_31677366_31681990_31682101_31686648_31686741_31690492
ES.13530.83	chr16	+	3911	25	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.6703472789225	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAACTCTGTAACTATG	NA	False	NA	NA	False	NA	NA	NA	31482797	31691498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483139_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.87	chr16	+	4799	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	1	62	junction_1	71.7693639375465	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482819	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483235_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.88	chr16	+	4573	25	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-36	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.1200254703146	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATATGTTAAATGT	NA	False	NA	12	True	AATAAA	-10	NA	31482820	31692160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609097_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.89	chr16	+	3489	25	FSM	ENSMUSG00000022770.18	ENSMUST00000023454.12	3725	25	-147	383	-36	40	multi-exon	FALSE	canonical	1	12	junction_17	99.2697993125581	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGTTAACTCATAAT	NA	False	NA	NA	False	ATTAAA	-38	NA	31482820	31691119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.9	chr16	+	4858	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	-189	-6	-59	3	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTGTCTTGAATT	NA	False	NA	22	True	AATAAA	-20	NA	31482667	31692170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.96	chr16	+	4619	26	NNC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	103.853250310233	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482952	31692167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503163_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661585_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.97	chr16	+	4423	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	90.640889411641	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTAAATGTGTCTTGAA	NA	False	NA	20	True	AATAAA	-18	NA	31482953	31692168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13530.98	chr16	+	3741	24	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	85.9554551186269	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTAACTATGGGAATT	NA	False	NA	NA	False	NA	NA	NA	31482965	31691504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ES.13531.1	chr16	-	173	1	Intergenic	novelGene_11356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31518815	31518642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31518600_31518800
ES.13532.1	chr16	-	1851	1	Intergenic	novelGene_11357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTCCTGGCACATGT	NA	False	NA	NA	False	NA	NA	NA	31536743	31534892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31534900_31536700
ES.13533.1	chr16	-	1242	1	Antisense	novelGene_ENSMUSG00000022770.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAACAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	31562185	31560943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_31560900_31562200
ES.13534.1	chr16	-	178	1	Intergenic	novelGene_11359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	31671167	31670989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31671000_31671200
ES.13535.1	chr16	-	6904	1	Antisense	novelGene_ENSMUSG00000022770.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGGTTGCCAATGACTG	NA	False	NA	NA	False	NA	NA	NA	31695691	31688787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_31688800_31695700
ES.13536.1	chr16	+	4077	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	43	13	43	-13	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGTGGAAACTGTCTG	1768	False	NA	NA	False	AATAAA	-32	NA	31697670	31717825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.2	chr16	+	3138	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	45	950	45	-950	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTGCTCTCCTGGTC	1770	False	NA	NA	False	AATGAA	-17	NA	31697672	31716888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.3	chr16	+	3562	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	64	507	64	-507	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCCATCGTCAGCACA	1789	False	NA	NA	False	AATAAA	-24	NA	31697691	31717331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.4	chr16	+	7863	12	NIC	ENSMUSG00000022780.6	novel	4133	16	NA	NA	1395	-9	intron_retention	FALSE	canonical	1	2	junction_6	1.43739893644017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGAAACTGTCTGCCAC	3120	False	NA	NA	False	AATAAA	-36	NA	31699022	31717829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31713697_31715246
ES.13536.5	chr16	+	3623	12	ISM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	6009	31	6009	-31	3prime_fragment	FALSE	canonical	1	2	junction_4	1.43739893644017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACGCAGAGGCTTGGAT	7734	False	NA	NA	False	AATAAA	-14	NA	31703636	31717807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.6	chr16	+	3217	9	ISM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	9185	14	9185	-14	3prime_fragment	FALSE	canonical	1	2	junction_1	1.5612494995996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGGTGGAAACTGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	31706812	31717824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.7	chr16	+	3823	8	NIC	ENSMUSG00000022780.6	novel	4133	16	NA	NA	9194	14	intron_retention	FALSE	canonical	2	3	junction_2	1.24539969815448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAACTTGTTTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	31706821	31717852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13536.8	chr16	+	3058	8	NIC	ENSMUSG00000022780.6	novel	4133	16	NA	NA	9203	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.1189138534559	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTGCCACCTGACT	NA	False	NA	NA	False	AATAAA	-42	NA	31706830	31717835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_31707109_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ES.13537.1	chr16	-	134	1	Intergenic	novelGene_11360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	31741241	31741107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31741100_31741200
ES.13538.1	chr16	+	2177	1	FSM	ENSMUSG00000083890.2	ENSMUST00000120250.2	880	1	-45	-1252	-45	1252	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCGACTCAGTGTCTCA	3297	False	NA	NA	False	NA	NA	NA	31743761	31745938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31743800_31745900
ES.13539.1	chr16	+	2096	1	Intergenic	novelGene_11361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGCTGTTTTTTGTT	293	False	NA	NA	False	NA	NA	NA	31749451	31751547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31749500_31751500
ES.1354.1	chr1	+	233	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAATTGCTGAAAA	1704	False	NA	NA	False	AATAAA	-26	NA	133257838	133258071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133257800_133258100
ES.13540.1	chr16	-	169	1	Intergenic	novelGene_11362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	31762711	31762542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31762500_31762700
ES.13541.1	chr16	-	1441	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	5	-1	5	1	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	31767307	31765866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31765900_31767300
ES.13541.2	chr16	-	773	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	-40	712	-40	-712	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGTATTTCTCAGA	NA	False	NA	0	True	ATTAAA	-22	NA	31767352	31766579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31766600_31767400
ES.13542.1	chr16	+	1759	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	26	285	26	-285	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGAGTCTCGCTAGTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	31767356	31777005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ES.13542.2	chr16	+	2024	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	46	0	-42	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767376	31777290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ES.13542.3	chr16	+	704	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	46	1320	-42	4	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACGCCTTTAACTCTA	NA	False	NA	11	True	ATTAAA	-12	NA	31767376	31775970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ES.13542.4	chr16	+	1852	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	94	124	1	-124	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGAACTGTTTACCATA	NA	False	NA	NA	False	AATAAA	-15	NA	31767424	31777166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ES.13542.5	chr16	+	3935	2	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	3750	291	3617	-291	intron_retention	FALSE	canonical	3	415	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCATCGGAGTCTCGCT	NA	False	NA	NA	False	AATAAA	-18	NA	31771080	31776999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_31773125_31775108
ES.13543.1	chr16	+	213	1	Intergenic	novelGene_11363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	31797253	31797466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31797300_31797500
ES.13544.1	chr16	+	147	1	Intergenic	novelGene_11364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACACAAACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	31801127	31801274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31801100_31801300
ES.13545.1	chr16	+	173	1	Intergenic	novelGene_11365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCGAGCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	31803700	31803873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31803700_31803900
ES.13546.1	chr16	+	174	1	Intergenic	novelGene_11366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	31811553	31811727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31811600_31811700
ES.13547.1	chr16	-	4651	9	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	96	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.2485293608758	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTGTGTTTAATAA	NA	False	NA	NA	False	AATAAA	-22	NA	31807899	31778485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802315_31802450_31802585_31802692_31807757
ES.13547.10	chr16	-	6209	10	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	20.5047419989729	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31821994	31778492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802683_31807757_31809284_31821809
ES.13547.11	chr16	-	6049	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	21.0341983446006	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31821963	31778492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.12	chr16	-	5381	11	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.7506961902612	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACATGTGTTCTGTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	31821989	31778494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31778561_31779390_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.13	chr16	-	3585	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	114	2633	5	201	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAAGACTGGGTAT	NA	False	NA	NA	False	TATAAA	-13	NA	31821991	31781122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.14	chr16	-	3359	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	137	2836	13	-2	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTTGGATTTTTTTT	NA	False	NA	NA	False	CATAAA	-20	NA	31821968	31781325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.15	chr16	-	3326	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	20.2669681995112	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTTGGATTTTTTTT	NA	False	NA	NA	False	CATAAA	-20	NA	31822013	31781325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.16	chr16	-	1835	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	20.0234237831596	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTTCTTGGATTTT	NA	False	NA	NA	False	CATAAA	-16	NA	31821974	31781329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31821809
ES.13547.17	chr16	-	3387	10	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	-417	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.0357704809531	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAATTTTCTTGGATTT	NA	False	NA	NA	False	CATAAA	-15	NA	31822522	31781330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31822330
ES.13547.18	chr16	-	3061	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	10	794	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCGTGTTGTTCACTT	NA	False	NA	NA	False	NA	NA	NA	31821971	31793845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.19	chr16	-	2293	7	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	5	6	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	18.8826787176914	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTTTTAATTTTTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	31821991	31794633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.2	chr16	-	6221	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	112	-1	3	1	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTCTGTTGTGTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	31821993	31778488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.20	chr16	-	2879	7	NNC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	5	-404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.420228961067	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCCTTCTCTGTACAA	NA	False	NA	NA	False	NA	NA	NA	31821991	31795043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31795139_31795792_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.21	chr16	-	3554	6	FSM	ENSMUSG00000022772.13	ENSMUST00000144320.2	2804	6	-16	-734	-16	-404	multi-exon	FALSE	canonical	3	51	junction_4	7.08801805866774	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCCTTCTCTGTACAA	NA	False	NA	NA	False	NA	NA	NA	31822012	31795043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.22	chr16	-	3680	2	NNC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	9129	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCAGTCCTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	31798866	31795047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31795650_31795788
ES.13547.23	chr16	-	4082	6	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	4	-3382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.7200337267888	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTATGGCTGGGCATTGC	NA	False	NA	NA	False	NA	NA	NA	31821977	31799159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31799632_31800458_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.24	chr16	-	5824	3	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	-7	-5107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGTTTAACAAGGATTA	NA	False	NA	NA	False	NA	NA	NA	31821988	31800884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31801590_31804343_31809284_31821809
ES.13547.25	chr16	-	8580	2	NIC	ENSMUSG00000022772.13	novel	2804	6	NA	NA	6	-5107	intron_retention	FALSE	canonical	3	70	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGTTTAACAAGGATTA	NA	False	NA	NA	False	NA	NA	NA	31821990	31800884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31809284_31821809
ES.13547.26	chr16	-	3144	5	ISM	ENSMUSG00000022772.13	ENSMUST00000144320.2	2804	6	32	5134	17	-5134	5prime_fragment	FALSE	canonical	3	51	junction_3	7.69334127671456	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31821964	31800911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ES.13547.27	chr16	-	3846	2	ISM	ENSMUSG00000022772.13	ENSMUST00000144320.2	2804	6	-24	9871	-24	-9871	5prime_fragment	FALSE	canonical	3	70	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTGTGCAAGTCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	31822020	31805648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_31809284_31821809
ES.13547.28	chr16	-	176	1	Intergenic	novelGene_11367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31813653	31813477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31813500_31813700
ES.13547.4	chr16	-	4657	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	21.2470586199596	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	31821960	31778489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31821813
ES.13547.6	chr16	-	6112	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	22.0507227772697	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	31821991	31778489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31807757_31809284_31821809
ES.13547.7	chr16	-	4564	9	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	5103	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.2470586199596	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31802892	31778492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31802835
ES.13547.9	chr16	-	6291	11	NNC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.6107700001442	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTGTTCTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	31821963	31778492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821001_31821106_31821809
ES.13548.1	chr16	+	180	1	Intergenic	novelGene_11368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	31824939	31825119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31824900_31825100
ES.13549.1	chr16	+	237	1	Intergenic	novelGene_11369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCACCCAGCATGATGGT	NA	False	NA	NA	False	NA	NA	NA	31828258	31828495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31828300_31828500
ES.13549.2	chr16	+	178	2	Intergenic	novelGene_11370	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGTTTTATGTC	NA	False	NA	-10	True	NA	NA	NA	31828260	31950781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31828359_31950701
ES.13549.3	chr16	+	177	2	Intergenic	novelGene_11371	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	192	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAATAACCT	NA	False	NA	NA	False	NA	NA	NA	31828261	31923290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31828281_31923132
ES.13549.4	chr16	+	2127	1	Antisense	novelGene_ENSMUSG00000022781.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATACA	-14	NA	31834517	31836644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_31834500_31836600
ES.13549.5	chr16	+	1455	1	Intergenic	novelGene_11376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGAGCAAATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	31895466	31896921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31895500_31896900
ES.13549.6	chr16	+	1709	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	5	4	5	-4	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGGCTTTTCTTCAG	6497	False	NA	22	True	AATAAA	-22	NA	31918622	31926883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ES.13549.7	chr16	+	179	1	Intergenic	novelGene_11380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAATAACCT	NA	False	NA	NA	False	NA	NA	NA	31923111	31923290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31923100_31923300
ES.13549.8	chr16	+	210	1	Intergenic	novelGene_11381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGCTGGCGAGATGGC	1758	False	NA	NA	False	TTTAAA	-11	NA	31950390	31950600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31950400_31950600
ES.13549.9	chr16	+	194	1	Intergenic	novelGene_11382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTTGCTTTCCCTTT	1970	False	NA	5	True	NA	NA	NA	31950602	31950796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31950600_31950800
ES.1355.1	chr1	-	1989	6	Antisense	novelGene_ENSMUSG00000116158.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAACACTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	133260006	133243025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_133243847_133244678_133244714_133247009_133247204_133249489_133249612_133257071_133257772_133259889
ES.13550.1	chr16	+	3994	1	Antisense	novelGene_ENSMUSG00000052384.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGGGAGACCCTCA	NA	False	NA	NA	False	NA	NA	NA	31960540	31964534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_31960500_31964500
ES.13551.1	chr16	+	5054	1	Intergenic	novelGene_11385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	31967050	31972104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31967000_31972100
ES.13551.2	chr16	+	1932	2	Antisense	novelGene_ENSMUSG00000052384.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	31967074	31972101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_31967506_31970600
ES.13551.3	chr16	+	3863	4	Intergenic	novelGene_11386	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	31967126	32019100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31967617_32015083_32015336_32015383_32015859_32016454
ES.13551.4	chr16	+	4123	2	Intergenic	novelGene_11387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	31967498	32019100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_31967741_32015219
ES.13551.5	chr16	+	175	1	Intergenic	novelGene_11389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTAAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	32001420	32001595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32001400_32001600
ES.13552.1	chr16	+	3519	1	Antisense	novelGene_ENSMUSG00000035764.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	32055413	32058932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_32055400_32058900
ES.13552.2	chr16	+	291	1	Intergenic	novelGene_11391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCTGGCTGTCCTGGAA	NA	False	NA	NA	False	NA	NA	NA	32055415	32055706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32055400_32055700
ES.13553.1	chr16	+	1356	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	-196	-7	-196	-2	multi-exon	FALSE	canonical	3	50	junction_1	36.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTAATTTTGGTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	32065848	32075899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32066086_32070640_32071137_32075276
ES.13553.2	chr16	+	5278	2	ISM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	15	0	-11	0	intron_retention	FALSE	canonical	3	50	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	32066059	32075892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32066086_32070640
ES.13553.3	chr16	+	3947	1	NIC	ENSMUSG00000022787.11	novel	832	3	NA	NA	-9	-970	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACGGCTGCAGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	32066061	32070008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32066100_32070000
ES.13553.4	chr16	+	605	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4	4925	4	-2	5prime_fragment	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGCTTCGGCTGATG	NA	False	NA	NA	False	ATTAAA	-13	NA	32066074	32070976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32066344_32070640
ES.13553.5	chr16	+	1482	3	NIC	ENSMUSG00000022787.11	novel	1394	3	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAACAGTAATTTTGG	NA	False	NA	10	True	AATAAA	-11	NA	32066077	32075893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32066447_32070640_32071137_32075276
ES.13553.6	chr16	+	1359	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	26	9	26	0	multi-exon	FALSE	canonical	3	19	junction_1	52	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	32066096	32075892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32066344_32070640_32071137_32075276
ES.13553.7	chr16	+	1115	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4567	9	4419	0	3prime_fragment	FALSE	canonical	3	123	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	32070637	32075892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32071137_32075276
ES.13554.1	chr16	-	5797	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-10	-46	-10	46	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTTAACAGATTTTC	NA	False	NA	36	True	CATAAA	-14	NA	31898170	31835061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.10	chr16	-	4083	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	340	-1573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGAATTGAGATTCTT	NA	False	NA	2	True	ATTAAA	-26	NA	31897820	31836680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897650
ES.13554.11	chr16	-	4192	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-24	1573	-24	-1573	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGAATTGAGATTCTT	NA	False	NA	2	True	ATTAAA	-26	NA	31898184	31836680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.13	chr16	-	5644	14	NIC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	26	-1578	intron_retention	FALSE	canonical	3	184	junction_7	23.186662152521	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	-3	True	ATTAAA	-21	NA	31898134	31836685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.14	chr16	-	4376	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	248	-1578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	-3	True	ATTAAA	-21	NA	31897912	31836685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897444
ES.13554.15	chr16	-	4088	14	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	58	-1578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.2234212116799	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	-3	True	ATTAAA	-21	NA	31898102	31836685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31862655_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.16	chr16	-	4252	16	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	-6	-1581	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	77.9083792384077	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31898166	31836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31871432_31871519_31897905
ES.13554.18	chr16	-	4512	18	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	284	-1581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	96.6316446123341	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31897876	31836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31871432_31871519_31874795_31874889_31875533_31875649_31897563
ES.13554.19	chr16	-	2791	16	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	94	-1581	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.9343544772204	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31898066	31836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31837236_31838510_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.20	chr16	-	4129	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	40	-1581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9188414725263	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31898120	31836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840582_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.21	chr16	-	4600	19	Fusion	ENSMUSG00000022781.9_ENSMUSG00000023791.19	novel	5741	15	NA	NA	4	-1581	multi-exon	FALSE	canonical	1	2	junction_14	104.724579991141	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31918541	31836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31903304_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918293
ES.13554.23	chr16	-	5117	22	Fusion	ENSMUSG00000022781.9_ENSMUSG00000023791.19	novel	5741	15	NA	NA	-2	-1583	multi-exon	FALSE	canonical	0	0	junction_14	128.90021453094	632	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGACAATTGTATGAAT	NA	False	NA	-8	True	ATTAAA	-16	NA	31918548	31836690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31900161_31900296_31903304_31903445_31904054_31904156_31906111_31906326_31908779_31908938_31911161_31911304_31915817_31915882_31918287
ES.13554.24	chr16	-	4252	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	248	-1583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGACAATTGTATGAAT	NA	False	NA	-8	True	ATTAAA	-16	NA	31897912	31836690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897563
ES.13554.25	chr16	-	3702	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-2	2041	-2	-2041	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGCTGTGAGTGTTGT	NA	False	NA	1	True	AATAAA	-39	NA	31898162	31837148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.26	chr16	-	3818	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	340	-2044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTGTGAGTGT	NA	False	NA	-2	True	AATAAA	-36	NA	31897820	31837151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897444
ES.13554.27	chr16	-	3778	16	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	-9	-2058	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	77.9083792384077	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGCTGCCTCTTGAGTT	NA	False	NA	-16	True	AATAAA	-22	NA	31898169	31837165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31871432_31871519_31897905
ES.13554.29	chr16	-	3677	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	-6	-2061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.1966590028221	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTAGGCTGCCTCTTGA	NA	False	NA	-19	True	AATAAA	-19	NA	31898166	31837168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846621_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.3	chr16	-	5596	14	NIC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	40	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	65.3768321159323	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTAAATTTCCATTTT	NA	False	NA	-14	True	AATAAA	-18	NA	31898120	31835111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31870993_31871202_31897905
ES.13554.30	chr16	-	4322	20	Fusion	ENSMUSG00000022781.9_ENSMUSG00000023791.19	novel	5741	15	NA	NA	-3	-2064	multi-exon	FALSE	canonical	1	2	junction_14	105.578894894252	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGCTAGGCTGCCTCT	NA	False	NA	-22	True	AATAAA	-16	NA	31918532	31837171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31903304_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ES.13554.31	chr16	-	3269	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-6	2478	-6	-2478	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGCCTTTCCTCTTCT	NA	False	NA	NA	False	AATAAA	-44	NA	31898166	31837585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.32	chr16	-	2991	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	6	2744	6	-2744	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTACAGTGTTCCTGAC	NA	False	NA	NA	False	AGTAAA	-16	NA	31898154	31837851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.33	chr16	-	2603	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-2	3140	-2	-3140	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATTTTGTAGTCTTTC	NA	False	NA	NA	False	ACTAAA	-42	NA	31898162	31838247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.34	chr16	-	2288	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	50	3403	50	-3403	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGGAAAGGAGCTTGA	NA	False	NA	NA	False	GATAAA	-20	NA	31898110	31838510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.35	chr16	-	2002	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-6	3745	-6	-3745	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATTGCAGTAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	31898166	31838852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.36	chr16	-	178	1	Intergenic	novelGene_11372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCTT	NA	False	NA	NA	False	NA	NA	NA	31844231	31844053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31844100_31844200
ES.13554.37	chr16	-	5616	1	NIC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	5103	-197	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAATGAGTGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31857715	31852099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31852100_31857700
ES.13554.38	chr16	-	1697	9	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-6	18012	-6	-1217	5prime_fragment	FALSE	canonical	3	184	junction_2	17.9960933260527	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTACCAGTTTTGA	NA	False	NA	NA	False	AATAAA	-8	NA	31898166	31853119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.39	chr16	-	173	2	Antisense	novelGene_ENSMUSG00000077460.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTGATC	9752	False	NA	NA	False	NA	NA	NA	32042584	31853215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_31853342_32042537
ES.13554.4	chr16	-	5662	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	61	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.631412865678	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTTCTTAAATTTC	NA	False	NA	-20	True	AATAAA	-12	NA	31898099	31835117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856119_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13554.40	chr16	-	2437	2	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	25	33887	25	-17092	5prime_fragment	FALSE	canonical	3	250	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	31898135	31868994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_31871202_31897905
ES.13554.41	chr16	-	174	1	Intergenic	novelGene_11373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	31873673	31873499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31873500_31873700
ES.13554.42	chr16	-	179	1	Intergenic	novelGene_11374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31881058	31880879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31880900_31881100
ES.13554.43	chr16	-	178	2	Intergenic	novelGene_11375	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAAGAAAAGAAA	6646	False	NA	NA	False	NA	NA	NA	32072673	31880880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31880979_32072593
ES.13554.44	chr16	-	1374	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	34	-415	0	407	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAACAAAAAACAAATAG	NA	False	NA	NA	False	AATAAA	-32	NA	31918522	31902826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ES.13554.45	chr16	-	977	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	5	0	5	0	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918540	31903235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ES.13554.46	chr16	-	1032	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	-33	-6	-31	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918589	31903235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ES.13554.47	chr16	-	966	5	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	167.537309277665	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918587	31903235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918287
ES.13554.49	chr16	-	1235	8	NIC	ENSMUSG00000023791.19	novel	940	7	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	186.538172490025	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTAGTTTGTCTTC	NA	False	NA	-3	True	AATAAA	-27	NA	31918541	31903236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31917518_31917615_31918287
ES.13554.5	chr16	-	5516	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	9169	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTTCTTAAATTTC	NA	False	NA	-20	True	AATAAA	-12	NA	31888991	31835117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31888951
ES.13554.50	chr16	-	5186	2	ISM	ENSMUSG00000023791.19	ENSMUST00000151250.8	630	4	-2059	-1	-2059	-1	intron_retention	FALSE	canonical	3	444	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGTTAGTTTGTCTTC	NA	False	NA	-3	True	AATAAA	-27	NA	31909032	31903236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_31903445_31904054
ES.13554.52	chr16	-	709	4	NIC	ENSMUSG00000023791.19	novel	713	5	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	196.350593468814	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918548	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31911161_31911304_31918287
ES.13554.54	chr16	-	1158	7	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	171.687377391454	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918563	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918287
ES.13554.55	chr16	-	1107	7	NIC	ENSMUSG00000023791.19	novel	940	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_5	173.76516720371	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918518	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918293
ES.13554.56	chr16	-	792	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	-42	-37	-9	-2	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918567	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
ES.13554.57	chr16	-	3317	6	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_5	166.38317222604	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918574	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31917615_31917716
ES.13554.58	chr16	-	817	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	-5	6	-5	-2	multi-exon	FALSE	canonical	3	63	junction_5	141.720287891325	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGGTTAGTTTGTC	NA	False	NA	-6	True	AATAAA	-24	NA	31918563	31903239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
ES.13554.59	chr16	-	960	4	NNC	ENSMUSG00000023791.19	novel	670	2	NA	NA	-12	-2147	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	180.697414357692	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCTCTTGCTTATGATA	NA	False	NA	NA	False	AATAAA	-19	NA	31918570	31908466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31908938_31911161_31911304_31915817_31915882_31918287
ES.13554.6	chr16	-	5747	16	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	325	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	78.2393478727651	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTTCTTAAATTTC	NA	False	NA	-20	True	AATAAA	-12	NA	31897835	31835117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31871432_31871519_31897650
ES.13554.60	chr16	-	478	1	Intergenic	novelGene_11377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCAGGTGCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	31910340	31909862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31909900_31910300
ES.13554.61	chr16	-	286	1	Intergenic	novelGene_11378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTAAAAATACGTCACA	NA	False	NA	NA	False	AATGAA	-17	NA	31910342	31910056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31910100_31910300
ES.13554.62	chr16	-	160	1	Intergenic	novelGene_11379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31910344	31910184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31910200_31910300
ES.13554.63	chr16	-	729	1	Intergenic	novelGene_11383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGTTTTCTTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	31954891	31954162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31954200_31954900
ES.13554.64	chr16	-	183	1	Intergenic	novelGene_11384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAGGAGCCATTCC	NA	False	NA	NA	False	NA	NA	NA	31960502	31960319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31960300_31960500
ES.13554.65	chr16	-	3238	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	111	-801	2	801	multi-exon	FALSE	canonical	2	4	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGAGTTTCCATTGAA	NA	False	NA	NA	False	GATAAA	-21	NA	31984292	31960801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31963824_31966370_31966492_31984197
ES.13554.66	chr16	-	2543	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	-5	10	4	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAAATGCATCTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31984408	31961612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31963824_31966370_31966492_31984197
ES.13554.67	chr16	-	2327	2	FSM	ENSMUSG00000052384.15	ENSMUST00000115165.10	2389	2	34	28	-29	2	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGGTGTGCCTCATA	NA	False	NA	NA	False	ATTAAA	-15	NA	31984341	31961640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31963824_31984197
ES.13554.69	chr16	-	162	1	Intergenic	novelGene_11388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	31977881	31977719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_31977700_31977900
ES.13554.70	chr16	-	4195	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	188	junction_2	4	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	7807	False	NA	2	True	ATTAAA	-17	NA	32065992	32048929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.71	chr16	-	4129	4	NNC	ENSMUSG00000035764.6	novel	4179	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	90.5685743879557	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	7825	False	NA	2	True	ATTAAA	-17	NA	32065974	32048929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32052087_32057217_32057575_32065311_32065607_32065654
ES.13554.74	chr16	-	3949	3	NNC	ENSMUSG00000035764.6	novel	4179	3	NA	NA	218	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTCTGTGGTAGTCC	8041	False	NA	-4	True	ATTAAA	-11	NA	32065758	32048935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32052087_32057217_32057575_32065317
ES.13554.75	chr16	-	3773	2	NIC	ENSMUSG00000035764.6	novel	4179	3	NA	NA	42	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAACTCTGTGGTAGTC	7865	False	NA	-5	True	ATTAAA	-10	NA	32065934	32048936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32052087_32065311
ES.13554.76	chr16	-	3273	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	-12	918	-12	-918	multi-exon	FALSE	canonical	3	188	junction_2	4	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTCTGTGTCTTGTTT	7811	False	NA	NA	False	NA	NA	NA	32065988	32049847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.77	chr16	-	3026	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	2	1151	2	-1151	multi-exon	FALSE	canonical	3	188	junction_2	4	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACTAGTTAAAAGG	7825	False	NA	NA	False	ATTAAA	-17	NA	32065974	32050080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.78	chr16	-	2876	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	27	1276	27	-1276	multi-exon	FALSE	canonical	3	188	junction_2	4	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATAGCTGGCCCAGGAAT	7850	False	NA	NA	False	AAGAAA	-40	NA	32065949	32050205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.79	chr16	-	2655	3	NNC	ENSMUSG00000035764.6	novel	4179	3	NA	NA	42	-1277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATAGCTGGCCCAGGAA	7865	False	NA	NA	False	AAGAAA	-39	NA	32065934	32050206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32052087_32057422_32057575_32065311
ES.13554.8	chr16	-	5651	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	420	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1402298295179	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTCTTTTCTTAAATT	NA	False	NA	-22	True	AATAAA	-10	NA	31897740	31835119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897563
ES.13554.80	chr16	-	2695	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	-19	1503	-19	-1503	multi-exon	FALSE	canonical	3	188	junction_2	4	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGCTGGGGTTCTTGGG	7804	False	NA	-1	True	AATAAA	-17	NA	32065995	32050432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.81	chr16	-	1685	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	41	2453	41	-2453	multi-exon	FALSE	canonical	3	188	junction_2	4	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTATATATAATGT	7864	False	NA	NA	False	AATAAA	-17	NA	32065935	32051382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32052087_32057217_32057575_32065311
ES.13554.82	chr16	-	112	1	Intergenic	novelGene_11390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATGTATAT	NA	False	NA	NA	False	AATAAA	-10	NA	32055095	32054983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32055000_32055100
ES.13554.83	chr16	-	172	1	Intergenic	novelGene_11392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCCAAAACAACAAC	6643	False	NA	NA	False	NA	NA	NA	32072676	32072504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32072500_32072700
ES.13554.9	chr16	-	5188	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	-9	562	-9	-562	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTGGTTTTCTAACAA	NA	False	NA	NA	False	TTTAAA	-28	NA	31898169	31835669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ES.13555.1	chr16	-	178	1	Intergenic	novelGene_11393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAGGAT	562	False	NA	NA	False	NA	NA	NA	32078757	32078579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32078600_32078800
ES.13556.1	chr16	+	3955	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	-7	-16	-5	16	multi-exon	TRUE	canonical	3	5	junction_5	6.9108610172684	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGTCATTTGAATT	NA	False	NA	29	True	AATAAA	-30	NA	32096271	32119740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
ES.13556.10	chr16	+	4394	6	FSM	ENSMUSG00000014074.18	ENSMUST00000171474.2	4460	6	74	-8	74	8	multi-exon	FALSE	canonical	3	5	junction_5	6.9108610172684	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCATGTTCATTTT	NA	False	NA	NA	False	AATAAA	-3	NA	32096352	32120260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
ES.13556.11	chr16	+	3191	7	NNC	ENSMUSG00000014074.18	novel	3932	6	NA	NA	345	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.47873156131794	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTACGCTCTGCTGTCG	NA	False	NA	NA	False	AATAAA	-16	NA	32096623	32119469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118864_32119004
ES.13556.12	chr16	+	192	1	ISM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	22311	943	22311	-943	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGGTAAGTATC	3917	False	NA	NA	False	NA	NA	NA	32118589	32118781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32118600_32118800
ES.13556.13	chr16	+	199	1	Intergenic	novelGene_11395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTAAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	32140293	32140492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32140300_32140500
ES.13556.14	chr16	+	360	1	Intergenic	novelGene_11397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAAAAATAT	3167	False	NA	NA	False	NA	NA	NA	32145989	32146349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32146000_32146300
ES.13556.15	chr16	+	175	1	Intergenic	novelGene_11398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	3170	False	NA	NA	False	NA	NA	NA	32145992	32146167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32146000_32146200
ES.13556.16	chr16	+	3388	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-58	6983	-58	-1131	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAAGTTCTCTCTTTTGA	8194	False	NA	NA	False	NA	NA	NA	32151016	32205582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.17	chr16	+	7147	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-49	3215	-49	2637	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCGTTTTTACAACTC	8203	False	NA	NA	False	TATAAA	-28	NA	32151025	32209350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.19	chr16	+	4502	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	-38	5849	-38	3	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTGTGTGCTGTGTT	8214	False	NA	NA	False	NA	NA	NA	32151036	32206716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.2	chr16	+	3245	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	-3	690	-1	-690	multi-exon	FALSE	canonical	3	5	junction_5	6.9108610172684	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTATTATTATACATAA	NA	False	NA	NA	False	NA	NA	NA	32096275	32119034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
ES.13556.20	chr16	+	3005	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	-35	36509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	48.3048172742722	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAACCAAAAAAA	8217	False	NA	NA	False	NA	NA	NA	32151039	32249074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591_32205189_32249040
ES.13556.21	chr16	+	3346	11	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	-34	-1139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.6625107944721	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGAGTCAAAGTTCTC	8218	False	NA	NA	False	NA	NA	NA	32151040	32205574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186232_32188146_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.22	chr16	+	3292	10	FSM	ENSMUSG00000053774.10	ENSMUST00000232137.2	4384	10	-42	1134	-31	-1134	multi-exon	FALSE	canonical	3	7	junction_3	51.2071561357021	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCAAAGTTCTCTCTTT	8221	False	NA	NA	False	NA	NA	NA	32151043	32205579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.23	chr16	+	3077	10	NNC	ENSMUSG00000053774.10	novel	4384	10	NA	NA	-30	-1140	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	66.6379567810315	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGAGTCAAAGTTCT	8222	False	NA	NA	False	NA	NA	NA	32151044	32205573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200266_32200583_32200664_32203591
ES.13556.24	chr16	+	2940	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	-4	-24	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	48.3048172742722	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAAAACTTTTC	8248	False	NA	-8	True	TATAAA	-37	NA	32151070	32212541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591_32205076_32212428
ES.13556.25	chr16	+	4815	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	0	5498	0	354	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTTGTTTGACTATTT	8252	False	NA	NA	False	NA	NA	NA	32151074	32207067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.26	chr16	+	2014	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	1	8298	1	-2446	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTGGTCATCGTAC	8253	False	NA	NA	False	AATAAA	-39	NA	32151075	32204267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.27	chr16	+	2827	2	NNC	ENSMUSG00000053774.10	novel	369	2	NA	NA	3	-14445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGAGG	8255	False	NA	NA	False	NA	NA	NA	32151077	32157436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32153020_32156551
ES.13556.28	chr16	+	4664	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	4	5645	4	207	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGATACAATTATTTTT	8256	False	NA	NA	False	TATAAA	-24	NA	32151078	32206920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.29	chr16	+	3322	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	4	36505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.253685313085	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACCAAAAAACCAAA	8256	False	NA	NA	False	NA	NA	NA	32151078	32249070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591_32205566_32246964_32247009_32249035
ES.13556.3	chr16	+	3767	7	NNC	ENSMUSG00000014074.18	novel	3932	6	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.47873156131794	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTTGGCTTTTTCCA	NA	False	NA	10	True	AATAAA	-11	NA	32096305	32119721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118870_32119004
ES.13556.30	chr16	+	3207	11	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	4	36505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.7171427920628	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACCAAAAAACCAAA	8256	False	NA	NA	False	NA	NA	NA	32151078	32249070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194140_32200115_32200474_32200583_32200664_32203591_32205589_32249035
ES.13556.31	chr16	+	4755	11	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	4	356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.859402322932	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGTTTGACTATTTTT	8256	False	NA	NA	False	NA	NA	NA	32151078	32207069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200416_32200583_32200664_32203591
ES.13556.32	chr16	+	3383	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	2	-1141	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	72.6878302135717	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTTGAGTCAAAGTTC	8265	False	NA	NA	False	NA	NA	NA	32151087	32205572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186232_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32198578_32198651_32200079_32200474_32200583_32200664_32203591
ES.13556.33	chr16	+	4109	12	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	9	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	48.3048172742722	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTTTTGAGTCATTGT	8272	False	NA	15	True	AATAAA	-17	NA	32151094	32212564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591_32206210_32212392
ES.13556.34	chr16	+	3148	10	NIC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	10	-1144	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	52.52089531267	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACCTTGAGTCAAAG	8273	False	NA	NA	False	NA	NA	NA	32151095	32205569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32151179_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.35	chr16	+	3087	11	NNC	ENSMUSG00000053774.10	novel	10313	11	NA	NA	15	-1140	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	49.3015212747031	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGAGTCAAAGTTCT	8278	False	NA	NA	False	NA	NA	NA	32151100	32205573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200266_32200583_32200664_32203591
ES.13556.36	chr16	+	5977	7	ISM	ENSMUSG00000053774.10	ENSMUST00000232137.2	4384	10	37047	-1902	37047	1902	3prime_fragment	FALSE	canonical	3	131	junction_4	20.4321369959733	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTTAAATGCTTCAGT	4199	False	NA	NA	False	AATATA	-20	NA	32188132	32208615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ES.13556.37	chr16	+	177	1	Intergenic	novelGene_11400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTATTATGGA	NA	False	NA	NA	False	NA	NA	NA	32197792	32197969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32197800_32198000
ES.13556.38	chr16	+	4260	1	ISM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	57230	1	57219	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTTTTGAGTCATTGT	NA	False	NA	15	True	AATAAA	-17	NA	32208304	32212564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32208300_32212600
ES.13556.39	chr16	+	166	1	Intergenic	novelGene_11403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	32237429	32237595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32237400_32237600
ES.13556.4	chr16	+	3304	7	NNC	ENSMUSG00000014074.18	novel	3932	6	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.47873156131794	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGGCTTTTTCCACA	NA	False	NA	12	True	AATAAA	-13	NA	32096310	32119723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118585_32119179
ES.13556.40	chr16	+	845	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	-8	1	-8	-1	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	8	True	AATAAA	-20	NA	32238511	32247916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ES.13556.41	chr16	+	764	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	-41	-3	3	-1	multi-exon	FALSE	canonical	3	12	junction_2	127.027556065603	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	8	True	AATAAA	-20	NA	32238522	32247916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
ES.13556.42	chr16	+	714	6	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	15	-193	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	122.726688214096	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTGTATATGTTTAAA	NA	False	NA	21	True	AATAAA	-32	NA	32238534	32247720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32241772_32244058_32244129_32244971_32245060_32245675_32245740_32247573
ES.13556.43	chr16	+	611	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	22	205	-22	-201	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTAAGTTGTATA	NA	False	NA	13	True	AATAAA	-24	NA	32238541	32247712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ES.13556.44	chr16	+	2359	4	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	251	junction_2	21.6384431561566	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	8	True	AATAAA	-20	NA	32238544	32247916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32238746_32241637_32241772_32244058_32245740_32247573
ES.13556.45	chr16	+	2981	5	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	-17	-201	intron_retention	FALSE	canonical	3	21	junction_2	129.603964059746	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTAAGTTGTATA	NA	False	NA	13	True	AATAAA	-24	NA	32238546	32247712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32244129_32244971_32245060_32245675_32245740_32247573
ES.13556.46	chr16	+	3818	4	NNC	ENSMUSG00000014075.16	novel	720	4	NA	NA	-11	-201	intron_retention	FALSE	canonical	3	22	junction_2	122.358308077366	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTAAGTTGTATA	NA	False	NA	13	True	AATAAA	-24	NA	32238552	32247712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32245060_32245675_32245740_32247573
ES.13556.48	chr16	+	2137	4	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	-1	-201	intron_retention	FALSE	canonical	3	251	junction_2	21.6384431561566	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTAAGTTGTATA	NA	False	NA	13	True	AATAAA	-24	NA	32238562	32247712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32238746_32241637_32241772_32244058_32245740_32247573
ES.13556.49	chr16	+	1714	5	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	108.867752342004	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	8	True	AATAAA	-20	NA	32238573	32247916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32241772_32244058_32245060_32245675_32245740_32247573
ES.13556.5	chr16	+	3431	7	NNC	ENSMUSG00000014074.18	novel	4460	6	NA	NA	32	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.47873156131794	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTTCCACATTTT	NA	False	NA	16	True	AATAAA	-17	NA	32096310	32119727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118659_32119130
ES.13556.51	chr16	+	2329	4	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	23	-1	intron_retention	FALSE	canonical	1	1	junction_2	132.167402267814	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	False	NA	8	True	AATAAA	-20	NA	32238586	32247916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32241784_32244058_32245740_32247573
ES.13556.52	chr16	+	4600	3	NNC	ENSMUSG00000014075.16	novel	720	4	NA	NA	-19	2	intron_retention	FALSE	canonical	0	0	junction_1	129	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCATGAATAGTTTTTA	NA	False	NA	7	True	AATAAA	-19	NA	32238593	32247915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238750_32241637_32245740_32247573
ES.13556.53	chr16	+	780	5	NNC	ENSMUSG00000014075.16	novel	838	5	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	134.243016578145	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCATGAATAGTTTTTA	NA	False	NA	7	True	AATAAA	-19	NA	32238593	32247915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32238746_32241637_32241772_32244971_32245060_32245675_32245740_32247573
ES.13556.54	chr16	+	4342	2	ISM	ENSMUSG00000014075.16	ENSMUST00000131204.2	2158	3	2924	205	2924	-201	3prime_fragment	FALSE	canonical	3	258	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTAAGTTGTATA	NA	False	NA	13	True	AATAAA	-24	NA	32241536	32247712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32245740_32247573
ES.13556.55	chr16	+	1727	1	Genic_Genomic	ENSMUSG00000014075.16	novel	NA	NA	NA	NA	8696	1118	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACGAAAAAAAAAAAA	56	False	NA	NA	False	NA	NA	NA	32247308	32249035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_32247300_32249000
ES.13556.7	chr16	+	3987	8	NNC	ENSMUSG00000014074.18	novel	4460	6	NA	NA	41	128818	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.01472717959057	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACCAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	32096319	32249070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32119742_32146325_32146369_32249034
ES.13556.8	chr16	+	3450	7	NNC	ENSMUSG00000014074.18	novel	3932	6	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.47873156131794	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGCTTTTTCCACAT	NA	False	NA	13	True	AATAAA	-14	NA	32096321	32119724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118682_32119120
ES.13556.9	chr16	+	3353	7	NNC	ENSMUSG00000014074.18	novel	4460	6	NA	NA	43	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.40634680861233	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGTCATTTGAATT	NA	False	NA	29	True	AATAAA	-30	NA	32096321	32119740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32097234_32101128_32101196_32104187_32104368_32107936_32108059_32110720_32110800_32117205_32118593_32119134
ES.13557.1	chr16	-	219	1	Intergenic	novelGene_11394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAATCCCAACACTTGG	7779	False	NA	NA	False	NA	NA	NA	32137909	32137690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32137700_32137900
ES.13558.1	chr16	-	180	1	Intergenic	novelGene_11396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	7158	False	NA	NA	False	NA	NA	NA	32140854	32140674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32140700_32140900
ES.13559.1	chr16	-	176	1	Intergenic	novelGene_11399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	2407	False	NA	NA	False	NA	NA	NA	32177274	32177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32177100_32177300
ES.1356.1	chr1	+	175	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5328	False	NA	NA	False	NA	NA	NA	133261462	133261637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133261500_133261600
ES.13560.1	chr16	-	3090	1	Antisense	novelGene_ENSMUSG00000053774.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGAGAGGTTAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	32212149	32209059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32209100_32212100
ES.13561.1	chr16	-	300	1	Intergenic	novelGene_11401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATAATACTGAAAAGT	NA	False	NA	NA	False	AAAACA	-8	NA	32212874	32212574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32212600_32212900
ES.13561.2	chr16	-	177	1	Intergenic	novelGene_11402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	32212875	32212698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32212700_32212900
ES.13562.1	chr16	+	1588	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-46	3247	-43	205	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAGTAAGTAGAACTA	2443	False	NA	NA	False	AAAAAG	-10	NA	32249695	32290641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.10	chr16	+	2490	3	FSM	ENSMUSG00000005615.16	ENSMUST00000141772.9	1539	3	-30	-921	-6	921	multi-exon	FALSE	canonical	3	61	junction_1	17	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTAGATATGACTCATC	2480	False	NA	NA	False	NA	NA	NA	32249732	32276275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522_32270650_32274029
ES.13562.11	chr16	+	5153	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-9	-355	-6	355	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCTCTTCTCCTCTT	2480	False	NA	NA	False	GATAAA	-15	NA	32249732	32294243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.12	chr16	+	1979	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-7	2817	-4	216	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGGGAGCTCTTGT	2482	False	NA	NA	False	NA	NA	NA	32249734	32291071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.13	chr16	+	5864	2	FSM	ENSMUSG00000005615.16	ENSMUST00000141421.2	643	2	-17	-5204	0	921	multi-exon	FALSE	canonical	3	61	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTAGATATGACTCATC	2486	False	NA	NA	False	NA	NA	NA	32249738	32276275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522
ES.13562.14	chr16	+	5842	8	ISM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-1	5	-1	-5	intron_retention	FALSE	canonical	3	61	junction_1	11.4481974340852	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAATTTCCTGTGGTTT	2488	False	NA	17	True	AATAAA	-22	NA	32249740	32293883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868
ES.13562.16	chr16	+	4693	10	NNC	ENSMUSG00000005615.16	novel	4789	9	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.8332758223446	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAATTTCCTGTGGTTTT	2524	False	NA	18	True	AATAAA	-23	NA	32249776	32293884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114_32290407_32290463
ES.13562.17	chr16	+	5080	9	FSM	ENSMUSG00000005615.16	ENSMUST00000115140.2	1857	9	-204	-3019	6	-14	multi-exon	FALSE	canonical	0	0	junction_1	28.2795752266543	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTGTTTCAATTTC	2591	False	NA	8	True	AATAAA	-13	NA	32249843	32293874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32250257_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.18	chr16	+	175	1	Intergenic	novelGene_11404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTTTTTTTTTAAA	9308	False	NA	NA	False	NA	NA	NA	32256560	32256735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32256600_32256700
ES.13562.2	chr16	+	4829	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-38	-2	-35	2	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGGTTTTGACCAG	2451	False	NA	24	True	AATAAA	-29	NA	32249703	32293890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.3	chr16	+	4766	9	NNC	ENSMUSG00000005615.16	novel	4789	9	NA	NA	-18	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.2842712474619	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTTCAATTTCCT	2468	False	NA	10	True	AATAAA	-15	NA	32249720	32293876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281880_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ES.13562.5	chr16	+	1172	8	ISM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	-20	4694	-17	-338	5prime_fragment	FALSE	canonical	3	61	junction_1	11.4481974340852	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTATATTTGTTGGTTG	2469	False	NA	NA	False	NA	NA	NA	32249721	32289194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868
ES.13562.8	chr16	+	4571	7	NIC	ENSMUSG00000005615.16	novel	4789	9	NA	NA	-13	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	29.9091216112335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTTCAATTTCCT	2473	False	NA	10	True	AATAAA	-15	NA	32249725	32293876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32288868_32289058_32290114
ES.13563.1	chr16	-	180	1	Intergenic	novelGene_11405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGAGGTTTGGAA	NA	False	NA	0	True	NA	NA	NA	32279156	32278976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32279000_32279200
ES.13564.1	chr16	+	2507	10	NNC	ENSMUSG00000052363.9	novel	1323	9	NA	NA	-8453	1	intron_retention	FALSE	canonical	0	0	junction_3	0.496903994999953	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGGTGTCTGGCCTGT	2818	False	NA	NA	False	ATTAAA	-19	NA	32306629	32326030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32306783_32314849_32316051_32316392_32316515_32317129_32317270_32317792_32317966_32318438_32318545_32319653_32319786_32324764_32324851_32325168_32325396_32325863
ES.13565.1	chr16	-	1297	9	NNC	ENSMUSG00000035699.9	novel	2618	9	NA	NA	-70	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	13.322326185768	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGCTTCTGTTGGCGCC	NA	False	NA	-5	True	AATAAA	-30	NA	32306591	32294337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306501
ES.13565.2	chr16	-	1641	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	-56	1033	-56	-14	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACGCTTGCACAAGACACA	NA	False	NA	-22	True	AATAAA	-13	NA	32306753	32294354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
ES.13566.1	chr16	+	165	1	Intergenic	novelGene_11406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTATTTTAAAAA	2183	False	NA	NA	False	NA	NA	NA	32334435	32334600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32334400_32334600
ES.13567.1	chr16	-	172	1	Intergenic	novelGene_11407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTATTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32367503	32367331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32367300_32367500
ES.13568.1	chr16	+	1332	3	NNC	ENSMUSG00000116957.2	novel	1207	2	NA	NA	-686	18	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	32368342	32372544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32368506_32369084_32369240_32371530
ES.13569.1	chr16	+	2885	1	Intergenic	novelGene_11408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGGAAAACAGAAAAAA	3100	False	NA	NA	False	NA	NA	NA	32388205	32391090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32388200_32391100
ES.1357.1	chr1	+	181	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133266894	133267075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133266900_133267100
ES.13570.1	chr16	+	4853	19	NNC	ENSMUSG00000022797.17	novel	3527	5	NA	NA	-117	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.577987911202	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTCGGACTCATTTC	7840	False	NA	15	True	AATAAA	-16	NA	32427620	32451609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427704_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.10	chr16	+	6005	16	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	20	junction_5	107.799113581183	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTTGTCGGACTCATT	7998	False	NA	13	True	AATAAA	-14	NA	32427778	32451607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.11	chr16	+	5988	16	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-22	-5	intron_retention	FALSE	canonical	1	11	junction_11	109.990585455706	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTGACTTGTCGGACT	7998	False	NA	9	True	AATAAA	-10	NA	32427778	32451603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.12	chr16	+	7408	16	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	399	junction_6	26.0375796792935	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8001	False	NA	10	True	AATAAA	-11	NA	32427781	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.14	chr16	+	2423	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	57	2410	-6	-2406	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGTTGTGCTAAATT	8014	False	NA	28	True	ATTAAA	-29	NA	32427794	32449202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.15	chr16	+	5986	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	399	junction_9	25.8474339877288	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8015	False	NA	10	True	AATAAA	-11	NA	32427795	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.16	chr16	+	4843	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.577987911202	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8015	False	NA	10	True	AATAAA	-11	NA	32427795	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431966_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.17	chr16	+	6009	17	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_3	109.151199604035	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8015	False	NA	10	True	AATAAA	-11	NA	32427795	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433507_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.18	chr16	+	4769	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	104.742194628717	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8015	False	NA	14	True	AATAAA	-15	NA	32427795	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.19	chr16	+	3830	20	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	101.893295988073	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTTGTCGGACTCATT	8015	False	NA	13	True	AATAAA	-14	NA	32427795	32451607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911_32449923_32450919
ES.13570.2	chr16	+	4892	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	-2	0	-2	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCGGACTCATTTCATA	7955	False	NA	18	True	AATAAA	-19	NA	32427735	32451612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.21	chr16	+	4747	20	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	101.893295988073	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8016	False	NA	10	True	AATAAA	-11	NA	32427796	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911_32449803_32449878
ES.13570.23	chr16	+	4488	20	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	101.893295988073	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8016	False	NA	10	True	AATAAA	-11	NA	32427796	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911_32451209_32451543
ES.13570.24	chr16	+	10647	12	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	399	junction_6	26.9784119388781	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTGTCGGACTCAT	8016	False	NA	12	True	AATAAA	-13	NA	32427796	32451606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.25	chr16	+	4811	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.678910146313	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTGTCGGACTCAT	8016	False	NA	12	True	AATAAA	-13	NA	32427796	32451606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434020_32434213_32435570_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.26	chr16	+	5047	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	0	-5	intron_retention	FALSE	canonical	3	399	junction_9	25.8499797540965	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTGACTTGTCGGACT	8020	False	NA	9	True	AATAAA	-10	NA	32427800	32451603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.27	chr16	+	5193	14	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	0	-2411	intron_retention	FALSE	canonical	3	399	junction_6	24.9320971331258	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTGTGTTGGTTGTGCT	8020	False	NA	23	True	ATTAAA	-24	NA	32427800	32449197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.28	chr16	+	6263	16	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	1	-4	intron_retention	FALSE	canonical	3	399	junction_7	25.8616833687729	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8021	False	NA	10	True	AATAAA	-11	NA	32427801	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.29	chr16	+	4813	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	104.472159443392	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8022	False	NA	10	True	AATAAA	-11	NA	32427802	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447441_32448921
ES.13570.3	chr16	+	6093	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	9	0	intron_retention	FALSE	canonical	3	399	junction_7	25.2140059044571	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7966	False	NA	14	True	AATAAA	-15	NA	32427746	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.30	chr16	+	4512	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	146.531126706069	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8022	False	NA	10	True	AATAAA	-11	NA	32427802	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.31	chr16	+	5221	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-816	intron_retention	FALSE	canonical	3	399	junction_7	25.2140059044571	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATTTAACTATCTCC	8022	False	NA	NA	False	AATAAA	-30	NA	32427802	32450792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.32	chr16	+	2649	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	65	2176	2	-2172	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACAATGCTATATGTC	8022	False	NA	NA	False	NA	NA	NA	32427802	32449436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.33	chr16	+	4008	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	65	817	2	-813	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTAACTATCTCCCTT	8022	False	NA	NA	False	AATAAA	-33	NA	32427802	32450795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.34	chr16	+	7301	15	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	399	junction_7	24.4645724696437	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8022	False	NA	14	True	AATAAA	-15	NA	32427802	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.36	chr16	+	6310	16	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-4	intron_retention	FALSE	canonical	3	399	junction_9	24.6210388805094	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8022	False	NA	10	True	AATAAA	-11	NA	32427802	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.37	chr16	+	4603	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	110.957762234104	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTTGTCGGACTCATT	8022	False	NA	13	True	AATAAA	-14	NA	32427802	32451607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.38	chr16	+	4799	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.5160658688	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	8022	False	NA	10	True	AATAAA	-11	NA	32427802	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434195_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.39	chr16	+	4678	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	106.627573574413	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTGTCGGACTCAT	8022	False	NA	12	True	AATAAA	-13	NA	32427802	32451606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32448911
ES.13570.40	chr16	+	4797	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.577987911202	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTGTCGGACTCAT	8027	False	NA	12	True	AATAAA	-13	NA	32427807	32451606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32432002_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.41	chr16	+	4554	18	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-560	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	105.204003502439	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGACTTGTCGGACTCA	2190	False	NA	11	True	AATAAA	-12	NA	32433489	32451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911_32451352_32451398
ES.13570.42	chr16	+	4859	16	ISM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	5922	4	-390	0	3prime_fragment	FALSE	canonical	3	399	junction_6	21.1674802993229	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	2360	False	NA	14	True	AATAAA	-15	NA	32433659	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.43	chr16	+	4841	11	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	388	-1	intron_retention	FALSE	canonical	3	399	junction_2	21.6101827849743	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCGGACTCATTTCAT	6185	False	NA	17	True	AATAAA	-18	NA	32437484	32451611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.44	chr16	+	3696	3	ISM	ENSMUSG00000022797.17	ENSMUST00000128285.2	3527	5	1467	4	1467	-4	3prime_fragment	FALSE	canonical	3	447	junction_2	9	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	NA	False	NA	10	True	AATAAA	-11	NA	32444726	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32445589_32447293_32447435_32448911
ES.13570.45	chr16	+	4274	2	ISM	ENSMUSG00000022797.17	ENSMUST00000128285.2	3527	5	2594	4	2594	-4	3prime_fragment	FALSE	canonical	3	447	junction_1	0	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGACTTGTCGGACTC	NA	False	NA	10	True	AATAAA	-11	NA	32445853	32451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32447435_32448911
ES.13570.5	chr16	+	4762	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	103.076851767224	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7978	False	NA	14	True	AATAAA	-15	NA	32427758	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.6	chr16	+	5178	19	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	103.023085630549	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7985	False	NA	14	True	AATAAA	-15	NA	32427765	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32428175_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.8	chr16	+	4766	19	NNC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.67669213604	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	7998	False	NA	14	True	AATAAA	-15	NA	32427778	32451608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32427855_32431985_32432045_32433383_32433507_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13570.9	chr16	+	4774	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	-22	-3	combination_of_known_splicesites	FALSE	canonical	1	11	junction_13	103.412099310173	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGACTTGTCGGACTCA	7998	False	NA	11	True	AATAAA	-12	NA	32427778	32451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ES.13571.1	chr16	-	176	2	Antisense	novelGene_ENSMUSG00000022797.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAACAAACCAGC	NA	False	NA	NA	False	NA	NA	NA	32441212	32422733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32422812_32441114
ES.13571.2	chr16	-	219	1	Intergenic	novelGene_11409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGTACATGACTACCAA	NA	False	NA	NA	False	AAAAAG	-21	NA	32441212	32440993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32441000_32441200
ES.13572.1	chr16	-	419	3	Antisense	novelGene_ENSMUSG00000022797.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTGCTAGGG	NA	False	NA	NA	False	NA	NA	NA	32456116	32448078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32448241_32452901_32453094_32456051
ES.13573.1	chr16	+	174	1	Intergenic	novelGene_11410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATTGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	32456817	32456991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32456800_32457000
ES.13574.1	chr16	+	174	1	Intergenic	novelGene_11411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCGAACTA	NA	False	NA	NA	False	NA	NA	NA	32459741	32459915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32459700_32459900
ES.13575.1	chr16	+	4082	16	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-2442	0	intron_retention	TRUE	canonical	0	0	junction_1	52.6199793065545	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32460249	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32460267_32460421_32460545_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.10	chr16	+	4471	16	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	50.3941795580931	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462693	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463249_32482628_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.11	chr16	+	5054	14	FSM	ENSMUSG00000022791.20	ENSMUST00000115125.8	4313	14	-741	0	28	0	multi-exon	FALSE	canonical	3	16	junction_12	42.5358880846272	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462719	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
ES.13575.12	chr16	+	5372	17	NNC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_1	57.2352601112286	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462721	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463927_32475807_32475946_32476719_32476807_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.13	chr16	+	6511	14	NIC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	140	0	intron_retention	FALSE	canonical	3	77	junction_4	34.7974698121206	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462831	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.14	chr16	+	4787	15	NIC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	-203	0	intron_retention	FALSE	canonical	0	0	junction_3	51.7430859030993	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462905	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32482556_32482738_32484703_32484775_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.15	chr16	+	4825	17	NNC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	-200	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	49.3172130193911	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	NA	False	NA	23	True	AATAAA	-19	NA	32462908	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32462976_32463153_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.16	chr16	+	4998	16	NIC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	-198	0	intron_retention	FALSE	canonical	2	7	junction_13	49.261840088337	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462910	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499723_32499814_32499969_32500098_32501502
ES.13575.17	chr16	+	2294	5	NNC	ENSMUSG00000022791.20	novel	1732	5	NA	NA	-197	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	76.4771207617023	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	NA	False	NA	24	True	AATAAA	-20	NA	32462911	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463118_32498568_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.19	chr16	+	3983	14	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-194	-2	intron_retention	FALSE	canonical	0	0	junction_1	51.0120069402391	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	NA	False	NA	23	True	AATAAA	-19	NA	32462914	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463054_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
ES.13575.2	chr16	+	4127	16	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-2415	0	intron_retention	FALSE	canonical	0	0	junction_1	52.6199793065545	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32460276	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32460369_32460451_32460545_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.20	chr16	+	4076	15	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-191	-2	intron_retention	FALSE	canonical	0	0	junction_1	45.7689962792299	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	NA	False	NA	23	True	AATAAA	-19	NA	32462917	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463054_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.21	chr16	+	4447	12	NIC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	-162	-1	intron_retention	FALSE	canonical	0	0	junction_1	48.1981104530009	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	NA	False	NA	24	True	AATAAA	-20	NA	32462946	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.22	chr16	+	1753	5	NNC	ENSMUSG00000022791.20	novel	690	2	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.4771207617023	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32463042	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463084_32498945_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.24	chr16	+	4611	15	NIC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	-82	-2	intron_retention	FALSE	canonical	2	6	junction_6	45.7542793805416	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	NA	False	NA	23	True	AATAAA	-19	NA	32463241	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489035_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.27	chr16	+	4033	15	NIC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	16	junction_13	46.8270809489988	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32463784	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499969_32500098_32501502
ES.13575.28	chr16	+	175	1	Intergenic	novelGene_11412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	1491	False	NA	NA	False	NA	NA	NA	32468673	32468848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32468700_32468800
ES.13575.29	chr16	+	132	1	Intergenic	novelGene_11413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2304	False	NA	NA	False	NA	NA	NA	32473817	32473949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32473800_32473900
ES.13575.3	chr16	+	4207	16	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-2365	1	intron_retention	FALSE	canonical	1	1	junction_1	50.2522525752716	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCGTGCCCGCCTGTTT	NA	False	NA	27	True	AATAAA	-23	NA	32460326	32502312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32460545_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.30	chr16	+	4067	15	NIC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	7	junction_1	44.5274508314929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	4306	False	NA	24	True	AATAAA	-20	NA	32475819	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32475946_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.31	chr16	+	4312	13	NIC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	7	junction_1	45.0163550526053	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	4311	False	NA	26	True	AATAAA	-22	NA	32475824	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32475946_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32500098_32501502
ES.13575.32	chr16	+	3948	14	NIC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	7	junction_1	49.9577336148168	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	4329	False	NA	24	True	AATAAA	-20	NA	32475842	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32475946_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
ES.13575.33	chr16	+	4087	15	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	819	-2	intron_retention	FALSE	canonical	0	0	junction_1	45.7689962792299	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	5146	False	NA	23	True	AATAAA	-19	NA	32476659	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32476807_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.34	chr16	+	5539	14	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-862	0	intron_retention	FALSE	canonical	0	0	junction_1	46.7902280800915	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	5367	False	NA	25	True	AATAAA	-21	NA	32476880	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32477005_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.35	chr16	+	4031	15	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-770	0	intron_retention	FALSE	canonical	3	4	junction_1	45.0548984856366	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	5459	False	NA	26	True	AATAAA	-22	NA	32476972	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32477061_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.36	chr16	+	4156	16	NIC	ENSMUSG00000022791.20	novel	4049	15	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_1	50.2522525752716	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	6219	False	NA	26	True	AATAAA	-22	NA	32477732	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32477901_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.37	chr16	+	4070	15	NIC	ENSMUSG00000022791.20	novel	4049	15	NA	NA	31	0	intron_retention	FALSE	canonical	1	1	junction_1	45.5893381735471	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	6260	False	NA	26	True	AATAAA	-22	NA	32477773	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32477901_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.38	chr16	+	5739	16	NIC	ENSMUSG00000022791.20	novel	4267	15	NA	NA	894	-5	intron_retention	FALSE	canonical	0	0	junction_1	50.3941795580931	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTACTCTCGCGTGCCCG	7123	False	NA	20	True	AATAAA	-16	NA	32478636	32502305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32480394_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.39	chr16	+	3945	14	ISM	ENSMUSG00000022791.20	ENSMUST00000238856.2	4267	15	2484	1	-25	0	3prime_fragment	FALSE	canonical	3	77	junction_3	33.9641300518284	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32482553	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.4	chr16	+	5611	14	NNC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	-1890	0	intron_retention	FALSE	canonical	0	0	junction_1	46.7902280800915	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32460801	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32460998_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.40	chr16	+	3690	15	NNC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	135	0	intron_retention	FALSE	canonical	1	7	junction_8	51.0464474368037	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32482713	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494479_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.41	chr16	+	3760	13	ISM	ENSMUSG00000022791.20	ENSMUST00000238856.2	4267	15	4633	3	2124	-2	3prime_fragment	FALSE	canonical	3	77	junction_2	33.9116499156263	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	NA	False	NA	23	True	AATAAA	-19	NA	32484702	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.42	chr16	+	3806	14	ISM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	21304	2	2124	-1	3prime_fragment	FALSE	canonical	3	42	junction_9	43.8999669771142	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	NA	False	NA	24	True	AATAAA	-20	NA	32484702	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.43	chr16	+	4490	13	NIC	ENSMUSG00000022791.20	novel	4516	16	NA	NA	2124	0	intron_retention	FALSE	canonical	3	44	junction_9	39.7229118044262	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32484702	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.44	chr16	+	4200	12	NNC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	148	0	intron_retention	FALSE	canonical	0	0	junction_8	48.9720783999405	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32487201	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497603_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.45	chr16	+	8336	7	NIC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	1462	0	intron_retention	FALSE	canonical	3	135	junction_2	23.998263826091	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	1560	False	NA	26	True	AATAAA	-22	NA	32489672	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32489737_32490112_32490260_32490356_32494535_32496711_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.46	chr16	+	2914	8	ISM	ENSMUSG00000022791.20	ENSMUST00000115126.9	4540	15	26779	1	-1869	0	3prime_fragment	FALSE	canonical	2	7	junction_5	57.6711295508721	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	1990	False	NA	25	True	AATAAA	-21	NA	32490102	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499723_32499814_32499969_32500098_32501502
ES.13575.47	chr16	+	2669	6	ISM	ENSMUSG00000022791.20	ENSMUST00000238806.2	4189	14	10303	1	-1617	0	3prime_fragment	FALSE	canonical	3	16	junction_4	61.2927401900095	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	2242	False	NA	25	True	AATAAA	-21	NA	32490354	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
ES.13575.48	chr16	+	3955	6	ISM	ENSMUSG00000022791.20	ENSMUST00000238891.2	4049	15	15257	2	983	-2	3prime_fragment	FALSE	canonical	3	16	junction_4	70.6155790176644	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	4887	False	NA	23	True	AATAAA	-19	NA	32492999	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499969_32500098_32501502
ES.13575.49	chr16	+	3799	6	ISM	ENSMUSG00000022791.20	ENSMUST00000115120.9	2796	7	1235	3	1190	-2	3prime_fragment	FALSE	canonical	3	87	junction_2	37.7232024091275	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTCGCGTGCCCGCCT	5094	False	NA	23	True	AATAAA	-19	NA	32493206	32502308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.5	chr16	+	5229	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	-1003	0	-51	0	multi-exon	FALSE	canonical	3	77	junction_4	34.8270508281674	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462640	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.50	chr16	+	3927	3	NIC	ENSMUSG00000022791.20	novel	4049	15	NA	NA	-114	0	intron_retention	FALSE	canonical	3	16	junction_1	93	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	356	False	NA	25	True	AATAAA	-21	NA	32496634	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32499626_32499969_32500098_32501502
ES.13575.51	chr16	+	2815	3	NIC	ENSMUSG00000022791.20	novel	1732	5	NA	NA	-595	-3	intron_retention	FALSE	canonical	3	166	junction_1	18	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTCTCGCGTGCCCGCC	1653	False	NA	22	True	AATAAA	-18	NA	32497931	32502307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32499814_32499969_32500098_32501502
ES.13575.6	chr16	+	5224	16	FSM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	-708	0	-1	0	multi-exon	FALSE	canonical	3	42	junction_11	42.4157203561761	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32462690	32502311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.7	chr16	+	5037	15	NNC	ENSMUSG00000022791.20	novel	4226	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	7	junction_9	45.5503757909183	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462691	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494479_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.8	chr16	+	3861	14	NNC	ENSMUSG00000022791.20	novel	871	6	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	55.5215188305799	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGCGTGCCCGCCTG	NA	False	NA	24	True	AATAAA	-20	NA	32462691	32502309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32462834_32482556_32482738_32484703_32484775_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ES.13575.9	chr16	+	5386	13	NIC	ENSMUSG00000022791.20	novel	1075	7	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	52.9013757435055	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGCGTGCCCGCCTGT	NA	False	NA	25	True	AATAAA	-21	NA	32462693	32502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32462761_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32499626_32499969_32500098_32501502
ES.13576.1	chr16	-	1830	2	Antisense	novelGene_ENSMUSG00000022791.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAAGTCATGAATAGTG	6163	False	NA	NA	False	NA	NA	NA	32471467	32469322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32471031_32471345
ES.13577.1	chr16	-	1023	5	Antisense	novelGene_ENSMUSG00000022791.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTCAAAGGGACGGCT	NA	False	NA	NA	False	NA	NA	NA	32497133	32489573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32489734_32490109_32490258_32490354_32490450_32494337_32494534_32496709
ES.13577.2	chr16	-	5552	3	Antisense	novelGene_ENSMUSG00000022791.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32499420	32489604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32489734_32490109_32490450_32494337
ES.13578.1	chr16	-	3339	1	Intergenic	novelGene_11414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	32525516	32522177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32522200_32525500
ES.13579.1	chr16	-	2125	1	Intergenic	novelGene_11415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	32551220	32549095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32549100_32551200
ES.1358.1	chr1	+	1482	9	NNC	ENSMUSG00000070645.6	novel	1592	9	NA	NA	474	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.17586189819115	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTTTCGGATGGGT	7879	False	NA	2	True	AATAAA	-13	NA	133280120	133288055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133280307_133281864_133282016_133282539_133282664_133283232_133283352_133284122_133284320_133286141_133286262_133286675_133286821_133287071_133287171_133287714
ES.13580.1	chr16	-	176	1	Intergenic	novelGene_11416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGTTCCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	32593089	32592913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32592900_32593100
ES.13581.1	chr16	+	159	1	Intergenic	novelGene_11417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	32607029	32607188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32607000_32607200
ES.13582.1	chr16	-	2264	4	NNC	ENSMUSG00000035638.15	novel	2299	4	NA	NA	-1919	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTCTTCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	32619724	32606409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32606764_32610469_32610562_32613565_32615300_32619640
ES.13583.1	chr16	+	2406	1	Antisense	novelGene_ENSMUSG00000035629.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAAATGGTCAGTGATT	5837	False	NA	NA	False	AATAAA	-14	NA	32667071	32669477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_32667100_32669500
ES.13584.1	chr16	+	170	1	Intergenic	novelGene_11418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	32689994	32690164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32690000_32690200
ES.13585.1	chr16	+	1594	9	NIC	ENSMUSG00000022800.15	novel	514	4	NA	NA	24	-218	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	195.39155400119	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAAATGTGGC	NA	False	NA	NA	False	ATTAAA	-6	NA	32697893	32726596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698041_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.10	chr16	+	3912	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	-47	-1603	-21	-828	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGATTGAGTTGTGGT	NA	False	NA	10	True	AATAAA	-33	NA	32698129	32728417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.11	chr16	+	3450	9	NNC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	0	-840	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	186.1677670812	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	-2	True	AATAAA	-21	NA	32698150	32728405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32698367_32704515_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.12	chr16	+	1296	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	1	3015	1	81	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATTCTCTGTTGACT	NA	False	NA	NA	False	AATATA	-38	NA	32698151	32726230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.13	chr16	+	4262	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	-19	-1981	-1	-450	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTAGTTTTGTGGTAT	NA	False	NA	5	True	AATAAA	-14	NA	32698157	32728795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.14	chr16	+	3346	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-1	-832	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	219.124510314132	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTATAAAGATTGAGTTG	NA	False	NA	6	True	AATAAA	-29	NA	32698157	32728413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32725901
ES.13585.15	chr16	+	5155	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	2	-840	intron_retention	FALSE	canonical	3	485	junction_4	63.9183152187866	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCTGAGCTATAAAGA	NA	False	NA	-2	True	AATAAA	-21	NA	32698160	32728405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32721078_32722788_32722916_32725901
ES.13585.16	chr16	+	5660	8	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	3	-841	intron_retention	FALSE	canonical	0	0	junction_2	267.658326214293	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTCTGAGCTATAAAG	NA	False	NA	-3	True	AATAAA	-20	NA	32698161	32728404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32708499_32708600_32711634_32711784_32715454_32715568_32718743_32721078_32722788_32722916_32725901
ES.13585.17	chr16	+	1655	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	11	2646	3	-215	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGGCTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	32698161	32726599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.18	chr16	+	3257	7	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	4	-841	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	226.923628856347	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTCTGAGCTATAAAG	NA	False	NA	-3	True	AATAAA	-20	NA	32698162	32728404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32725901
ES.13585.19	chr16	+	3496	9	NNC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	5	-822	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	205.280905103227	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGTTGTGGTTTTTTA	NA	False	NA	16	True	AATAAA	-39	NA	32698163	32728423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718724_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.2	chr16	+	3409	9	NIC	ENSMUSG00000022800.15	novel	514	4	NA	NA	33	-825	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	195.39155400119	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGAGTTGTGGTTTT	NA	False	NA	13	True	AATAAA	-36	NA	32697902	32728420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698041_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.20	chr16	+	3339	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-9	-843	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	215.250305174118	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698167	32728402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.21	chr16	+	4363	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	18	-69	-8	69	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGCCTCTTACATTGA	NA	False	NA	NA	False	ATTAAA	-28	NA	32698168	32729314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.22	chr16	+	5434	7	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	-5	-9	intron_retention	FALSE	canonical	3	536	junction_6	54.3558235661604	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCATCTGGGTTGAC	NA	False	NA	6	True	AATAAA	-13	NA	32698171	32726805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.23	chr16	+	1425	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	22	2865	-4	231	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGAGTACACCTCTGT	NA	False	NA	NA	False	NA	NA	NA	32698172	32726380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.25	chr16	+	7045	7	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	-2	-826	intron_retention	FALSE	canonical	3	536	junction_6	54.3558235661604	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATTGAGTTGTGGTTT	NA	False	NA	12	True	AATAAA	-35	NA	32698174	32728419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.27	chr16	+	5132	8	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	1	-841	intron_retention	FALSE	canonical	3	7	junction_4	217.037474428087	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTCTGAGCTATAAAG	NA	False	NA	-3	True	AATAAA	-20	NA	32698177	32728404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32717462_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.29	chr16	+	1164	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	30	3118	-2	-22	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGTTTTGGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	32698180	32726127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.3	chr16	+	3881	9	NNC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-34	-443	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	186.1677670812	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGGTATTTAATGT	NA	False	NA	12	True	AATAAA	-21	NA	32698116	32728802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32698367_32704515_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.30	chr16	+	1774	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	210.012050188768	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGACTTCTGTC	NA	False	NA	13	True	AATAAA	-20	NA	32698180	32726812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32722788_32722916_32725901
ES.13585.31	chr16	+	3427	9	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-2	-828	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	204.961543649047	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGATTGAGTTGTGGT	NA	False	NA	10	True	AATAAA	-33	NA	32698180	32728417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718770_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.32	chr16	+	1721	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	219.124510314132	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGACTTCTGTC	NA	False	NA	13	True	AATAAA	-20	NA	32698181	32726812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32725901
ES.13585.33	chr16	+	3036	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	0	-1169	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	210.012050188768	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGACCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	32698182	32728076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32722788_32722916_32725901
ES.13585.36	chr16	+	5026	7	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	2	-827	intron_retention	FALSE	canonical	1	2	junction_3	231.896289079599	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATTGAGTTGTGGTT	NA	False	NA	11	True	AATAAA	-34	NA	32698184	32728418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32717462_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.37	chr16	+	2252	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	8	2	2	-2	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGACTTCTGTC	NA	False	NA	13	True	AATAAA	-20	NA	32698184	32726812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.38	chr16	+	5550	7	NIC	ENSMUSG00000022800.15	novel	2262	8	NA	NA	2	-828	intron_retention	FALSE	canonical	3	485	junction_4	66.6133119829162	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGATTGAGTTGTGGT	NA	False	NA	10	True	AATAAA	-33	NA	32698184	32728417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32721078_32722788_32722916_32725901
ES.13585.4	chr16	+	3463	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	-29	-803	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	210.012050188768	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTTGTGTGTTACAAA	NA	False	NA	35	True	TATAAA	-20	NA	32698121	32728442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32722788_32722916_32725901
ES.13585.41	chr16	+	5015	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	8	-2	intron_retention	FALSE	canonical	3	534	junction_4	56.9733199284847	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGACTTCTGTC	NA	False	NA	13	True	AATAAA	-20	NA	32698190	32726812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.42	chr16	+	3787	9	NNC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	12	-452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	267.636880866595	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCAGTAGTTTTGTGGT	NA	False	NA	3	True	AATAAA	-12	NA	32698194	32728793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718770_32718841_32719247_32719310_32721002_32721076_32722788_32722916_32725901
ES.13585.43	chr16	+	2506	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	33	-277	-11	211	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTCACTCCGTTTCTT	NA	False	NA	NA	False	AGTAAA	-26	NA	32698209	32727091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.44	chr16	+	2054	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	74	2184	4	181	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTATAATGAAGTTAC	NA	False	NA	NA	False	NA	NA	NA	32698224	32727061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.45	chr16	+	2978	6	ISM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	17301	843	-9	-843	3prime_fragment	FALSE	canonical	3	485	junction_1	56.0121415409195	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32715451	32728402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.6	chr16	+	1907	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	-27	2432	-27	-1	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTTGACTTCTGTCC	NA	False	NA	14	True	AATAAA	-21	NA	32698123	32726813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.7	chr16	+	3516	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	-26	822	-26	-822	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGTTGTGGTTTTTTA	NA	False	NA	16	True	AATAAA	-39	NA	32698124	32728423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.8	chr16	+	3894	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	-26	444	-26	-444	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGTGGTATTTAATG	NA	False	NA	11	True	AATAAA	-20	NA	32698124	32728801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13585.9	chr16	+	3240	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	-24	1096	-24	-1096	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTCATCCTTGTTCAG	NA	False	NA	NA	False	AAAACA	-42	NA	32698126	32728149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ES.13586.1	chr16	-	5297	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	-14	-26	1	1	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTGGAATGGTTTTGT	NA	False	NA	-9	True	AATAAA	-41	NA	32688735	32642071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.10	chr16	-	5174	18	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_14	17.3831242986013	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGACGACTGTGGAATG	NA	False	NA	-16	True	AATAAA	-34	NA	32688726	32642078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.11	chr16	-	4073	9	NIC	ENSMUSG00000035629.20	novel	2301	12	NA	NA	634	-6	intron_retention	FALSE	canonical	3	59	junction_8	3.20156211871642	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTTGACGACTGTGG	NA	False	NA	-20	True	AATAAA	-30	NA	32656307	32642082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32649172_32649634_32649693_32656283
ES.13586.12	chr16	-	5388	20	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_18	21.8350654476348	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32688726	32642097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32677924_32678051_32688462
ES.13586.13	chr16	-	5076	4	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	1813	0	intron_retention	FALSE	canonical	3	62	junction_1	2.49443825784929	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32648275	32642097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32647294_32647657_32647723_32648228
ES.13586.14	chr16	-	5315	20	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_13	25.1236278411434	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32688703	32642097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663900_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32681909_32681988_32688462
ES.13586.15	chr16	-	5713	18	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	0	intron_retention	FALSE	canonical	3	55	junction_15	7.48932342724788	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32688714	32642097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.16	chr16	-	5141	18	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	16.8531208285261	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32688721	32642097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.17	chr16	-	4123	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	40	1094	27	645	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAATGTGCATTTTTTGT	NA	False	NA	NA	False	AATAGA	-14	NA	32688681	32643191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.19	chr16	-	3110	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	16	2131	3	0	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTTGTCTGCTGTCCAA	NA	False	NA	NA	False	AATATA	-19	NA	32688705	32644228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.2	chr16	-	5326	20	NNC	ENSMUSG00000035629.20	novel	5311	20	NA	NA	-2	1	intron_retention	FALSE	canonical	1	2	junction_18	21.1069037293856	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTGGAATGGTTTTGT	NA	False	NA	-9	True	AATAAA	-41	NA	32688723	32642071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32687167_32687209_32688462
ES.13586.20	chr16	-	1387	4	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-6	4	intron_retention	FALSE	non_canonical	0	0	junction_2	36.2981481009094	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	32688727	32655890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32656386_32656779_32656991_32663367_32663797_32688475
ES.13586.21	chr16	-	3578	8	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-1	-5383	intron_retention	FALSE	canonical	1	2	junction_6	29.9938769261532	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTAGTAGTGGAGAAGT	NA	False	NA	NA	False	AGTAAA	-21	NA	32688710	32661277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32687167_32687209_32688462
ES.13586.22	chr16	-	4747	6	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	-6699	intron_retention	FALSE	canonical	3	55	junction_3	8.19756061276768	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGAGTTGCCCTTCTC	NA	False	NA	NA	False	AATAAA	-45	NA	32688726	32662593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32663902_32664916_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.23	chr16	-	1296	5	NNC	ENSMUSG00000035629.20	novel	404	2	NA	NA	0	6553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGTCGCTTCTTGATT	NA	False	NA	NA	False	AATAAA	-14	NA	32688709	32675276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32675505_32677261_32677416_32678838_32679290_32681842_32682059_32688462
ES.13586.4	chr16	-	5694	18	NIC	ENSMUSG00000035629.20	novel	5255	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	55	junction_15	7.51469149302179	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTGTGGAATGGTTTTG	NA	False	NA	-10	True	AATAAA	-40	NA	32688716	32642072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.5	chr16	-	5482	19	FSM	ENSMUSG00000035629.20	ENSMUST00000119810.2	3371	19	43	-2154	43	2	multi-exon	FALSE	canonical	2	4	junction_18	16.139151843335	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGACTGTGGAATGGTTT	NA	False	NA	-12	True	AATAAA	-38	NA	32698093	32642074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
ES.13586.7	chr16	-	5310	20	FSM	ENSMUSG00000035629.20	ENSMUST00000089684.10	5311	20	1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	21.249995926348	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACGACTGTGGAATGGT	NA	False	NA	-14	True	AATAAA	-36	NA	32688708	32642076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.8	chr16	-	5571	17	NIC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_10	17.2825779327044	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACGACTGTGGAATGG	NA	False	NA	-15	True	AATAAA	-35	NA	32688714	32642077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32644517_32644748_32644843_32645933_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13586.9	chr16	-	5372	19	NNC	ENSMUSG00000035629.20	novel	5257	19	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	17.0366344557911	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGACGACTGTGGAATG	NA	False	NA	-16	True	AATAAA	-34	NA	32688726	32642078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647354_32647626_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ES.13587.1	chr16	-	6863	1	Antisense	novelGene_ENSMUSG00000022800.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAGGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	32732044	32725181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32725200_32732000
ES.13588.1	chr16	+	5535	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	1	0	1	0	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTTTCTTGCCAGAG	NA	False	NA	16	True	AATAAA	-25	NA	32734470	32836017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.10	chr16	+	2546	21	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	-2	-19	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	16.9566358691811	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCGTTTTTAATGAAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	32734489	32833050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808803_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.11	chr16	+	12267	22	NNC	ENSMUSG00000022801.14	novel	2794	22	NA	NA	0	-10	intron_retention	TRUE	non_canonical	0	0	junction_5	24.8166976192568	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAAAGCATGGTTTT	NA	False	NA	6	True	AATAAA	-15	NA	32734491	32836007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32781092_32781309_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32830706_32830757
ES.13588.12	chr16	+	5512	21	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	17.6676965108641	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAAAGCATGGTTTT	NA	False	NA	6	True	AATAAA	-15	NA	32734491	32836007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808792_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.13	chr16	+	5642	22	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	21.4556442737526	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTTTCTTGCCAGAG	NA	False	NA	16	True	AATAAA	-25	NA	32734492	32836017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832302_32832432_32832710
ES.13588.14	chr16	+	5152	21	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	20.6980675426475	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTAAAGCATGGTTT	NA	False	NA	5	True	AATAAA	-14	NA	32734495	32836006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710_32833536_32833732
ES.13588.16	chr16	+	5358	20	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	16.4029927679418	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTTTCTTGCCAGAG	NA	False	NA	16	True	AATAAA	-25	NA	32734497	32836017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.17	chr16	+	5399	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	33	104	6	-104	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTATTTTAAATTGC	NA	False	NA	-88	True	TATAAA	-14	NA	32734502	32835913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.19	chr16	+	5347	20	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.750664650589	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTAAAGCATGGTTT	NA	False	NA	5	True	AATAAA	-14	NA	32734503	32836006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799921_32802197_32802275_32806345_32806398_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.2	chr16	+	5312	22	NNC	ENSMUSG00000022801.14	novel	2794	22	NA	NA	2	-25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	16.627982316516	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTAAATTGTTCCAGC	NA	False	NA	-9	True	ATTAAA	-30	NA	32734471	32835992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710_32833536_32833732
ES.13588.20	chr16	+	5286	19	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	-7	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	21.7460085737335	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCTAAAGCATGGTTT	NA	False	NA	5	True	AATAAA	-14	NA	32734504	32836006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32808800_32808852_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.21	chr16	+	3117	1	FSM	ENSMUSG00000091997.2	ENSMUST00000163830.2	1272	1	-735	-1110	-735	1110	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGTGTCTCCTGTAT	6557	False	NA	NA	False	AATAAA	-27	NA	32742852	32745969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32742900_32746000
ES.13588.22	chr16	+	4606	15	ISM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	59771	10	-5526	-10	3prime_fragment	FALSE	canonical	3	40	junction_14	11.8513324834237	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAAAGCATGGTTTT	NA	False	NA	6	True	AATAAA	-15	NA	32794240	32836007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.23	chr16	+	4357	13	ISM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	65294	37	-3	-37	3prime_fragment	FALSE	canonical	3	40	junction_12	11.7921819675392	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATGTAATAAACACTTTA	NA	False	NA	-21	True	ATTAAA	-18	NA	32799763	32835980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.24	chr16	+	8091	1	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	21518	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATGTAATAAACACTTTAA	5803	False	NA	-20	True	ATTAAA	-19	NA	32827890	32835981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32827900_32836000
ES.13588.3	chr16	+	5540	21	NNC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	22.0524375069968	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAAAGCATGGTTTTCT	NA	False	NA	8	True	AATAAA	-17	NA	32734474	32836009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779762_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815382_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.5	chr16	+	4924	22	NNC	ENSMUSG00000022801.14	novel	2794	22	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.3147467066296	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCATGGTTTTCTTGC	NA	False	NA	11	True	AATAAA	-20	NA	32734482	32836012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710_32833536_32834129
ES.13588.7	chr16	+	4069	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	17	1450	-5	1054	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTTGAACCAAATCAT	NA	False	NA	NA	False	ATTAAA	-23	NA	32734486	32834567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13588.8	chr16	+	5193	21	ISM	ENSMUSG00000022801.14	ENSMUST00000135193.9	2794	22	-24	529	-4	-320	5prime_fragment	FALSE	canonical	1	1	junction_20	16.7454471424325	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACACGCCTACGTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	32734487	32832540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32829558
ES.13588.9	chr16	+	4880	16	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	-4	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.8926005226958	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAGCCTAAAGCATGGT	NA	False	NA	3	True	AATAAA	-12	NA	32734487	32836004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32734774_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ES.13589.1	chr16	+	176	1	Intergenic	novelGene_11422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	32845720	32845896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32845700_32845900
ES.1359.1	chr1	+	2296	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	-2	3	-2	-3	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGCTTGGGATCTGAT	NA	False	NA	22	True	ATTAAA	-32	NA	133291307	133308071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ES.1359.2	chr1	+	4365	5	NIC	ENSMUSG00000070644.14	novel	2297	8	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_4	34.554305086342	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATACGGTCTTGGAAGG	NA	False	NA	2	True	ATTAAA	-12	NA	133291325	133308051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133304643
ES.1359.3	chr1	+	3434	8	NNC	ENSMUSG00000070644.14	novel	2074	7	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8330875692408	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGGTCTTGGAAGGACA	NA	False	NA	5	True	ATTAAA	-15	NA	133291524	133308054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_133291757_133291941_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ES.1359.4	chr1	+	2193	6	ISM	ENSMUSG00000070644.14	ENSMUST00000129213.2	2074	7	2794	1	839	-1	3prime_fragment	FALSE	canonical	3	61	junction_3	8.70402205879558	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACGGTCTTGGAAGGAC	NA	False	NA	4	True	ATTAAA	-14	NA	133295863	133308053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ES.1359.5	chr1	+	4247	5	ISM	ENSMUSG00000070644.14	ENSMUST00000129213.2	2074	7	5002	1	3047	-1	3prime_fragment	FALSE	canonical	3	61	junction_2	9.73075022801428	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACGGTCTTGGAAGGAC	NA	False	NA	4	True	ATTAAA	-14	NA	133298071	133308053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ES.13590.1	chr16	+	3336	2	Antisense	novelGene_ENSMUSG00000035578.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCACATACACTCAGACA	NA	False	NA	NA	False	NA	NA	NA	32850100	32854274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_32850945_32851782
ES.13591.1	chr16	+	199	1	Intergenic	novelGene_11424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAATATAA	NA	False	NA	NA	False	NA	NA	NA	32856241	32856440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32856200_32856400
ES.13592.1	chr16	+	180	1	Intergenic	novelGene_11425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32864765	32864945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32864800_32864900
ES.13593.1	chr16	+	175	1	Intergenic	novelGene_11426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATCCGACAAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	32875860	32876035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_32875900_32876000
ES.13594.1	chr16	+	656	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-179	14	-179	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCCTAAATTGAGT	NA	False	NA	20	True	AATAAA	-35	NA	32876643	32880545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ES.13594.12	chr16	+	2820	2	FSM	ENSMUSG00000060636.15	ENSMUST00000137720.2	796	2	610	-2634	116	-1	multi-exon	FALSE	canonical	3	10468	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	False	NA	9	True	AATAAA	-24	NA	32877503	32880534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32877549_32877759
ES.13594.13	chr16	+	1236	2	ISM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	637	-8	637	-1	3prime_fragment	FALSE	canonical	3	8092	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	135	False	NA	9	True	AATAAA	-24	NA	32878024	32880534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_32879194_32880467
ES.13594.2	chr16	+	519	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	-3	-6	-3	6	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAATTGAGTTTCTCTT	NA	False	NA	27	True	AATAAA	-42	NA	32876832	32880552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ES.13594.4	chr16	+	479	5	NNC	ENSMUSG00000060636.15	novel	510	5	NA	NA	7	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3999.03397709997	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTTTTCACATCTG	NA	False	NA	7	True	AATAAA	-22	NA	32876842	32880532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32876926_32877515_32877549_32877759_32877913_32879048_32879194_32880467
ES.13594.5	chr16	+	1053	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	-516	-19	3	0	multi-exon	FALSE	canonical	3	8092	junction_3	1051.6733755729	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCCTAAATTGAGT	NA	False	NA	20	True	AATAAA	-35	NA	32876871	32880545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
ES.13594.7	chr16	+	521	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	-22	1	6	-1	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	False	NA	9	True	AATAAA	-24	NA	32876874	32880534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ES.13594.9	chr16	+	807	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115076.8	519	5	-299	11	8	-1	multi-exon	FALSE	canonical	3	362	junction_1	3846.56847072816	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	False	NA	9	True	AATAAA	-24	NA	32876876	32880534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32877276_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ES.13595.1	chr16	+	4562	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-116	1701	-116	425	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTCCCAGTGTTT	4663	False	NA	NA	False	NA	NA	NA	32882774	32946364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.2	chr16	+	6250	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-98	-5	-98	5	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTCTTTACCTAAAAC	4681	False	NA	NA	False	AATAAA	-19	NA	32882792	32948070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.3	chr16	+	6242	18	NNC	ENSMUSG00000022802.3	novel	6147	17	NA	NA	-37	-2	intron_retention	FALSE	canonical	0	0	junction_6	6.86397748038345	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTAGCTTGTCTTTAC	4742	False	NA	NA	False	AATAAA	-12	NA	32882853	32948063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32894853_32895000_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927469_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.4	chr16	+	6139	17	NNC	ENSMUSG00000022802.3	novel	6147	17	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_13	5.48826873886474	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTAGCTTGTCTTTA	4777	False	NA	NA	False	AATAAA	-11	NA	32882888	32948062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925205_32927383_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.5	chr16	+	3220	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	-1	2928	-1	-802	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATATCCTGGATTTTTCC	4778	False	NA	NA	False	NA	NA	NA	32882889	32945137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.6	chr16	+	6199	17	NNC	ENSMUSG00000022802.3	novel	6147	17	NA	NA	0	138	intron_retention	FALSE	canonical	1	2	junction_13	5.17166257116607	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCCTACATCCAGAATGG	4779	False	NA	NA	False	AATAAA	-27	NA	32882890	32948203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927469_32927544_32930147_32930279_32937370_32937582_32943891
ES.13595.7	chr16	+	5439	18	NIC	ENSMUSG00000022802.3	novel	6147	17	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	5.38548606976311	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTAGCTTGTCTTTAC	4803	False	NA	NA	False	AATAAA	-12	NA	32882914	32948063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891_32944729_32945410
ES.13595.8	chr16	+	5007	1	FSM	ENSMUSG00002076382.1	ENSMUST00020183666.1	73	1	-3469	-1465	-3469	1465	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAACCATTCTTAATGGA	6899	False	NA	NA	False	NA	NA	NA	32885010	32890017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_32885000_32890000
ES.13596.1	chr16	-	7745	1	Antisense	novelGene_ENSMUSG00000091997.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGCTGGAGAGATGG	NA	False	NA	NA	False	ATTAAA	-44	NA	32744384	32736639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32736600_32744400
ES.13597.1	chr16	-	158	1	Intergenic	novelGene_11419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	8526	False	NA	NA	False	NA	NA	NA	32788911	32788753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32788800_32788900
ES.13598.1	chr16	-	5377	2	Intergenic	novelGene_11420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATAAAACATGATGGG	NA	False	NA	NA	False	NA	NA	NA	32817876	32811385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32814202_32815315
ES.13599.1	chr16	-	1558	1	Intergenic	novelGene_11421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCCTAGAAAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	32821985	32820427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32820400_32822000
ES.136.1	chr1	-	4306	27	FSM	ENSMUSG00000032769.6	ENSMUST00000041447.5	4263	27	-30	-13	-30	13	multi-exon	FALSE	canonical	1	1	junction_1	2.09712398157163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTATGCATTTTATTCC	NA	False	NA	NA	False	AATAAA	-33	NA	14989116	14942858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14943953_14944587_14944686_14946072_14946184_14950422_14950492_14951820_14952004_14952335_14952466_14954333_14954504_14955973_14956064_14957110_14957277_14957818_14957890_14959617_14959717_14960618_14960679_14961528_14961623_14963406_14963574_14966715_14966831_14968232_14968398_14968479_14968650_14969570_14969672_14970288_14970389_14972085_14972135_14973369_14973507_14974370_14974517_14974676_14974786_14976146_14976255_14980953_14981130_14982583_14982744_14988948
ES.136.2	chr1	-	3539	27	FSM	ENSMUSG00000032769.6	ENSMUST00000041447.5	4263	27	-44	768	-44	90	multi-exon	FALSE	canonical	1	1	junction_1	2.09712398157163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGCTGCATGGAGATC	NA	False	NA	NA	False	AAGAAA	-14	NA	14989130	14943639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_14943953_14944587_14944686_14946072_14946184_14950422_14950492_14951820_14952004_14952335_14952466_14954333_14954504_14955973_14956064_14957110_14957277_14957818_14957890_14959617_14959717_14960618_14960679_14961528_14961623_14963406_14963574_14966715_14966831_14968232_14968398_14968479_14968650_14969570_14969672_14970288_14970389_14972085_14972135_14973369_14973507_14974370_14974517_14974676_14974786_14976146_14976255_14980953_14981130_14982583_14982744_14988948
ES.1360.1	chr1	-	4276	14	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	6789	4	intron_retention	FALSE	canonical	0	0	junction_13	34.3533673189958	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCTTTCTCTGCTGGGA	NA	False	NA	-4	True	AATAAA	-19	NA	133345326	133310036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133344659_133345167_133345284
ES.1360.10	chr1	-	5170	12	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-40	0	intron_retention	FALSE	canonical	3	38	junction_6	18.3118080497144	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352155	133310040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.11	chr1	-	3717	14	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.8643019834896	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352155	133310040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133320997_133351613
ES.1360.12	chr1	-	3741	14	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	6903	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	28.2784129514592	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133345212	133310040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133344659
ES.1360.15	chr1	-	3770	13	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	6783	-1	intron_retention	FALSE	canonical	0	0	junction_12	29.5506862112465	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACGTGCCCTTTCTCTGC	NA	False	NA	-9	True	AATAAA	-14	NA	133345332	133310041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133345284
ES.1360.16	chr1	-	6501	10	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	41	junction_4	17.4575322453881	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACGTGCCCTTTCTCTGC	NA	False	NA	-9	True	AATAAA	-14	NA	133352166	133310041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133313348_133313731_133313829_133313922_133314033_133314503_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.17	chr1	-	3783	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-52	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.9932367148772	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACGTGCCCTTTCTCT	NA	False	NA	-11	True	AATAAA	-12	NA	133352167	133310043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133311663_133312150_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.18	chr1	-	3674	14	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-61	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.5020501702128	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACGTGCCCTTTCTCT	NA	False	NA	-11	True	AATAAA	-12	NA	133352176	133310043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133311568_133312176_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.19	chr1	-	2202	9	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.5243243168461	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACGTGCCCTTTCTCT	NA	False	NA	-11	True	AATAAA	-12	NA	133352164	133310043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133310860_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.2	chr1	-	3765	14	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-72	3	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	19.4802281798964	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTTTCTCTGCTGGG	NA	False	NA	-5	True	AATAAA	-18	NA	133352187	133310037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.20	chr1	-	3903	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-58	-3	intron_retention	FALSE	canonical	3	38	junction_7	17.776974808255	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACGTGCCCTTTCTCT	NA	False	NA	-11	True	AATAAA	-12	NA	133352173	133310043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.22	chr1	-	176	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCCCCTAAAGCA	NA	False	NA	NA	False	NA	NA	NA	133317551	133317375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133317400_133317600
ES.1360.5	chr1	-	4401	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-176	3	intron_retention	FALSE	canonical	3	41	junction_7	18.2412459978905	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTTTCTCTGCTGGG	NA	False	NA	-5	True	AATAAA	-18	NA	133352291	133310037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.7	chr1	-	3772	14	NNC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-56	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.8643019834896	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCCCTTTCTCTGCTGG	NA	False	NA	-6	True	AATAAA	-17	NA	133352171	133310038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321034_133351613
ES.1360.8	chr1	-	5543	11	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-47	1	intron_retention	FALSE	canonical	3	51	junction_1	14.3861044066836	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCCCTTTCTCTGCTG	NA	False	NA	-7	True	AATAAA	-16	NA	133352162	133310039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ES.1360.9	chr1	-	4033	6	NIC	ENSMUSG00000070643.12	novel	3179	13	NA	NA	-1797	0	intron_retention	FALSE	canonical	3	80	junction_1	12.9707362936728	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133315969	133310040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821
ES.13600.1	chr16	-	3632	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6385	-1587	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTTTCTGCACGAACA	6105	False	NA	NA	False	AATAAA	-19	NA	32863855	32834639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
ES.13600.12	chr16	-	1019	6	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6428	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.9282260103001	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGAATTCTCACCTAG	6148	False	NA	-7	True	ATTAAA	-20	NA	32863812	32836998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32863699
ES.13600.13	chr16	-	1959	11	NIC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	-184	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	26.2228907636058	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTGAATTCTCAC	960	False	NA	-11	True	ATTAAA	-16	NA	32876772	32837002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873914_32874065_32876520
ES.13600.14	chr16	-	1906	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	-238	3950	-210	-13	multi-exon	FALSE	canonical	2	4	junction_9	25.6242073048124	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTGAATTCTCAC	934	False	NA	-11	True	ATTAAA	-16	NA	32876798	32837002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
ES.13600.15	chr16	-	1143	8	NNC	ENSMUSG00000035578.17	novel	786	5	NA	NA	2489	-5082	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9730190704966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAATCGTATGC	3666	False	NA	NA	False	NA	NA	NA	32874066	32842401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32842580_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993
ES.13600.16	chr16	-	157	2	Antisense	novelGene_ENSMUSG00002076382.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32923620	32847138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32847146_32923470
ES.13600.17	chr16	-	163	1	Intergenic	novelGene_11423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTATGCAT	NA	False	NA	NA	False	NA	NA	NA	32850748	32850585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32850600_32850700
ES.13600.18	chr16	-	924	5	ISM	ENSMUSG00000035578.17	ENSMUST00000231235.2	1252	8	-85	13890	-85	10259	5prime_fragment	FALSE	canonical	3	14	junction_3	25.282157740193	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATCAGCAGAACAAAAGA	7407	False	NA	NA	False	NA	NA	NA	32870325	32850879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221
ES.13600.19	chr16	-	1692	1	Antisense	novelGene_ENSMUSG00000022802.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGGACTCAAACAGCG	NA	False	NA	NA	False	NA	NA	NA	32925093	32923401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32923400_32925100
ES.13600.2	chr16	-	3975	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	-214	1857	-186	-1857	multi-exon	TRUE	canonical	2	4	junction_9	25.6242073048124	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGGTTTAATGCTGC	958	False	NA	NA	False	ATTAAA	-18	NA	32876774	32834909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
ES.13600.3	chr16	-	3349	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6385	-1870	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGAAATGATGCTGA	6105	False	NA	NA	False	ATTAAA	-5	NA	32863855	32834922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
ES.13600.4	chr16	-	2488	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6408	1229	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACCAAGTTTTCCTTC	6128	False	NA	NA	False	AATAAA	-41	NA	32863832	32835760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
ES.13600.5	chr16	-	1919	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6392	644	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATGTGGCCCAGGTTGG	6112	False	NA	NA	False	TATAAA	-23	NA	32863848	32836345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
ES.13600.6	chr16	-	1364	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6374	71	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCTAGGGTTGGTGGT	6094	False	NA	73	True	AATAAA	-31	NA	32863866	32836918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
ES.13600.7	chr16	-	1265	9	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6408	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.8316510859843	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTCTCACCTAGC	6128	False	NA	-6	True	ATTAAA	-21	NA	32863832	32836997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32861358_32861373_32863699
ES.13600.8	chr16	-	1337	9	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6441	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.8316510859843	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGAATTCTCACCTAG	6161	False	NA	-7	True	ATTAAA	-20	NA	32863799	32836998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32862501_32862622_32863699
ES.13600.9	chr16	-	1195	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	8494	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	21.7612274563767	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGAATTCTCACCTAG	8214	False	NA	-7	True	ATTAAA	-20	NA	32861746	32836998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32861668
ES.13601.1	chr16	-	3807	2	Antisense	novelGene_ENSMUSG00000022802.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGGGGGGGACCAAGGG	NA	False	NA	NA	False	NA	NA	NA	32944318	32940466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_32942669_32942713
ES.13601.2	chr16	-	174	1	Intergenic	novelGene_11427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAACAATGAGAT	NA	False	NA	NA	False	NA	NA	NA	32942345	32942171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32942200_32942300
ES.13602.1	chr16	-	172	1	Intergenic	novelGene_11428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGTAAT	NA	False	NA	NA	False	NA	NA	NA	32955251	32955079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32955100_32955300
ES.13603.1	chr16	-	180	1	Intergenic	novelGene_11429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32959579	32959399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32959400_32959600
ES.13604.1	chr16	-	184	1	Intergenic	novelGene_11430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATAAAATCTC	NA	False	NA	NA	False	NA	NA	NA	32967971	32967787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_32967800_32968000
ES.13605.1	chr16	+	3705	13	NNC	ENSMUSG00000022807.10	novel	1676	5	NA	NA	-14855	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.2716338708173	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCGTCTCTTTCATAAA	NA	False	NA	7	True	AATAAA	-17	NA	32990585	33063684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_32990698_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.10	chr16	+	4375	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-9	22	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	44.2104284470426	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAAAAGAGTTTGTATT	NA	False	NA	27	True	AATAAA	-37	NA	33005431	33063704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.14	chr16	+	3723	13	FSM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	-4	756	-4	-756	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAATGTGTTCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	33005436	33062880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.15	chr16	+	4760	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.7313788489113	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005437	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33028605_33028831_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045062_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.16	chr16	+	3611	9	ISM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	1	14719	1	-8431	5prime_fragment	FALSE	canonical	3	140	junction_5	10.3077640640442	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTGGCTCTCTTATAC	NA	False	NA	NA	False	TATAAA	-19	NA	33005441	33048917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226
ES.13605.17	chr16	+	6686	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	140	junction_5	9.17596573159676	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005445	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.18	chr16	+	4176	11	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	48.9837728232524	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005448	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33062105
ES.13605.19	chr16	+	6566	12	NIC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	8	-71	intron_retention	FALSE	canonical	3	140	junction_5	9.17596573159676	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAATGATTCCGTTT	NA	False	NA	3	True	ATTAAA	-20	NA	33005448	33063565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.2	chr16	+	2286	8	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	-94	-11109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.8215969289056	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACGAA	NA	False	NA	NA	False	NA	NA	NA	33005346	33046239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33005453_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909
ES.13605.20	chr16	+	4556	13	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	68.2255247119597	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCGTCTCTTTCATAA	NA	False	NA	6	True	AATAAA	-16	NA	33005448	33063683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33028605_33028831_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33056624_33056779_33062105
ES.13605.21	chr16	+	1473	3	ISM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	10	38111	10	-31823	5prime_fragment	FALSE	canonical	3	154	junction_1	4	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACCATGTTTGGTTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	33005450	33025525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33006371_33016443_33016513_33025041
ES.13605.22	chr16	+	4594	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3429972271205	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTTGGCGTCTCTTTC	NA	False	NA	2	True	AATAAA	-12	NA	33005450	33063679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33017635_33017722_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.23	chr16	+	3377	5	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	10	-26611	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	70.6518754174297	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAAGGGGTCATTAGTC	NA	False	NA	NA	False	AATAAA	-17	NA	33005450	33030737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33028605
ES.13605.24	chr16	+	3523	12	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	10	-759	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.0929032814474	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTTTAAAATGTGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	33005450	33062877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026298_33026373_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.26	chr16	+	4279	12	NIC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	45.925379648597	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATGTGTTGGGAAAAT	NA	False	NA	-43	True	AATAAA	-17	NA	33005451	33063634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33056624_33056779_33062105
ES.13605.27	chr16	+	3347	9	ISM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	15	14969	15	-8681	5prime_fragment	FALSE	canonical	3	140	junction_5	10.3077640640442	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGGAACAACACCCAG	NA	False	NA	NA	False	NA	NA	NA	33005455	33048667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226
ES.13605.28	chr16	+	4412	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	42.488842949037	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGCGTCTCTTTCAT	NA	False	NA	4	True	AATAAA	-14	NA	33005455	33063681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105_33063215_33063307
ES.13605.29	chr16	+	4112	13	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.2716338708173	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTTGGCGTCTCTTTC	NA	False	NA	2	True	AATAAA	-12	NA	33005463	33063679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33005988_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.3	chr16	+	4570	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	-24	-25	-24	25	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTTTGTATTGGT	NA	False	NA	30	True	AATAAA	-40	NA	33005416	33063707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.30	chr16	+	4309	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	46.5937249703388	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005465	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33054792_33054976_33056624_33056779_33062105
ES.13605.31	chr16	+	6408	10	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	27	0	intron_retention	FALSE	canonical	1	8	junction_2	47.7550333459892	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005467	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33030295_33030473_33034711_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.33	chr16	+	4570	14	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3429972271205	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCATGTGTTGGGAAAA	NA	False	NA	-44	True	AATAAA	-16	NA	33005468	33063633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33016639_33016766_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.34	chr16	+	4303	12	NIC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	32	-71	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.0559715956425	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAATGATTCCGTTT	NA	False	NA	3	True	ATTAAA	-20	NA	33005472	33063565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.35	chr16	+	3514	12	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	33	-756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.867692851445	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAATGTGTTCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	33005473	33062880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33034711_33034914_33037083_33037235_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.36	chr16	+	3940	10	NIC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	33	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	50.3940031705714	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATGATTCCGTTTTC	NA	False	NA	5	True	ATTAAA	-22	NA	33005473	33063567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33006371_33016443_33016513_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.37	chr16	+	2194	3	ISM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	34	37366	34	-31078	5prime_fragment	FALSE	canonical	3	154	junction_1	4	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTATTCTTTTTATC	NA	False	NA	NA	False	AATAAA	-15	NA	33005474	33026270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33006371_33016443_33016513_33025041
ES.13605.38	chr16	+	4608	13	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	34	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.336610396393	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTGAAAAACAATAAAA	NA	False	NA	-28	True	AATAAA	-32	NA	33005474	33063649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006531_33016443_33016513_33025041_33025218_33026298_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.39	chr16	+	3884	13	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	35	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.6196114082387	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTCTGTCAGTAATTCA	NA	False	NA	NA	False	NA	NA	NA	33005475	33063086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026298_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.4	chr16	+	4950	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-22	22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.9309456028371	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAAAAGAGTTTGTATT	NA	False	NA	27	True	AATAAA	-37	NA	33005418	33063704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006531_33016443_33016513_33025041_33025218_33026292_33026373_33028605_33028831_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.40	chr16	+	4309	13	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	47	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.9007392911173	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAATGATTCCGTTT	NA	False	NA	3	True	ATTAAA	-20	NA	33005487	33063565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054840_33054976_33056624_33056779_33062105
ES.13605.41	chr16	+	4261	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	401	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.5168316037581	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGGCGTCTCTTTCA	NA	False	NA	3	True	AATAAA	-13	NA	33005841	33063680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33016639_33016766_33025041_33025218_33026292_33026373_33030295_33030473_33034694_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.42	chr16	+	2997	7	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-7994	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.5458962734516	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAATAAAAATAGAGA	NA	False	NA	-21	True	AATAAA	-39	NA	33036973	33063656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33037230_33044883_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.44	chr16	+	159	1	Intergenic	novelGene_11431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAATAAAATAT	3875	False	NA	NA	False	NA	NA	NA	33060929	33061088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33060900_33061100
ES.13605.6	chr16	+	4428	13	FSM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	-17	64	-17	-64	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTCCGTTTTCATTTT	NA	False	NA	10	True	ATTAAA	-27	NA	33005423	33063572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.7	chr16	+	4758	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	57.4797108531638	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005428	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33028605_33028831_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ES.13605.8	chr16	+	3648	8	NNC	ENSMUSG00000022807.10	novel	4475	13	NA	NA	-9	-10585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.569624790868	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAGAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	33005431	33046763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037235_33044909
ES.13605.9	chr16	+	4000	14	NNC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.5327530913906	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005431	33063682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105_33062630_33063159
ES.13606.1	chr16	-	8330	2	Antisense	novelGene_ENSMUSG00000022807.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAGGTGAGGCAGGAA	NA	False	NA	NA	False	NA	NA	NA	33036204	33027375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33027989_33028487
ES.13607.1	chr16	-	2037	1	Antisense	novelGene_ENSMUSG00000022807.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTCTGAAATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	33064878	33062841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33062800_33064900
ES.13608.1	chr16	+	1642	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-87	1606	-85	-902	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGACTGGTGCTGAT	9196	False	NA	5	True	AATAAA	-16	NA	33071726	33119033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.11	chr16	+	2593	14	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-9	137	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	145.745827226189	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTGTTATGGTTT	9272	False	NA	5	True	ACTAAA	-15	NA	33071802	33120072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110480_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.12	chr16	+	2894	12	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-8	6704	-6	-6000	5prime_fragment	FALSE	canonical	3	473	junction_8	43.7041140715249	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTCACTCGTGTTCATT	9275	False	NA	NA	False	AATAAA	-14	NA	33071805	33113935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110
ES.13608.13	chr16	+	6464	12	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-6	140	intron_retention	FALSE	canonical	3	473	junction_8	40.1861371599052	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTATGGTTTTGC	9275	False	NA	8	True	ACTAAA	-18	NA	33071805	33120075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33112257_33115010_33115126_33118800
ES.13608.14	chr16	+	2447	14	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	145.745827226189	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	9277	False	NA	22	True	AATAAA	-22	NA	33071807	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110480_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.15	chr16	+	3997	13	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	0	-4	intron_retention	FALSE	canonical	3	473	junction_8	42.0881185398234	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	9281	False	NA	22	True	AATAAA	-22	NA	33071811	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33112257_33115010_33115126_33118800
ES.13608.17	chr16	+	2318	13	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	154.805859600555	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	9282	False	NA	22	True	AATAAA	-22	NA	33071812	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.18	chr16	+	2448	14	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.647554382103	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	9282	False	NA	22	True	AATAAA	-22	NA	33071812	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101080_33104789_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.19	chr16	+	4762	13	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_3	154.349171253579	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAAGATTTGTATTAT	9283	False	NA	18	True	AATAAA	-18	NA	33071813	33119927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088391_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.2	chr16	+	2660	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-55	556	-53	148	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTTTTGCTCTGGTTT	9228	False	NA	16	True	ACTAAA	-26	NA	33071758	33120083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.20	chr16	+	3011	13	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	1	-987	intron_retention	FALSE	canonical	3	473	junction_8	42.0881185398234	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATCAGCTTTCTTTAA	9284	False	NA	-80	True	AAGAAA	-41	NA	33071814	33118948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33112257_33115010_33115126_33118800
ES.13608.21	chr16	+	5207	13	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	1	-3	intron_retention	FALSE	canonical	3	473	junction_8	43.1660231612266	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATTTGTATTATTTTAA	9284	False	NA	23	True	AATAAA	-23	NA	33071814	33119932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33115126_33118800
ES.13608.26	chr16	+	1651	6	ISM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	34540	4	18226	-4	3prime_fragment	FALSE	canonical	3	501	junction_1	36.9616016968962	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	NA	False	NA	22	True	AATAAA	-22	NA	33106353	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.27	chr16	+	2329	4	ISM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	37964	-142	21650	142	3prime_fragment	FALSE	canonical	3	507	junction_3	27.3536509852382	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTATGGTTTTGCTC	NA	False	NA	10	True	ACTAAA	-20	NA	33109777	33120077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.28	chr16	+	1388	2	ISM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	43195	-136	26881	136	3prime_fragment	FALSE	canonical	3	507	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTGTTATGGTT	NA	False	NA	4	True	ACTAAA	-14	NA	33115008	33120071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33115126_33118800
ES.13608.3	chr16	+	2499	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-44	706	-42	-2	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTGTATTATTTTAAG	9239	False	NA	24	True	AATAAA	-24	NA	33071769	33119933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.4	chr16	+	2037	15	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	144.22383751004	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATTTGTATTATTTTA	9262	False	NA	22	True	AATAAA	-22	NA	33071792	33119931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800_33118899_33119335
ES.13608.5	chr16	+	3177	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-19	3	-17	-3	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAATGTGATAAGGTTT	9264	False	NA	NA	False	NA	NA	NA	33071794	33120636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.7	chr16	+	3828	12	NIC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-11	-903	intron_retention	FALSE	canonical	2	4	junction_5	158.835014979289	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGACTGGTGCTGA	9270	False	NA	4	True	AATAAA	-15	NA	33071800	33119032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33110569_33112110_33112257_33115010_33115126_33118800
ES.13608.8	chr16	+	2622	14	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-10	137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	150.691973926673	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTGTTATGGTTT	9271	False	NA	5	True	ACTAAA	-15	NA	33071801	33120072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118784
ES.13608.9	chr16	+	4046	14	NNC	ENSMUSG00000022808.6	novel	3161	14	NA	NA	-10	-905	intron_retention	FALSE	canonical	0	0	junction_5	197.936096316089	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGGGGACTGGTGCT	9271	False	NA	2	True	AATAAA	-13	NA	33071801	33119030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33090510_33090676_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33110569_33112110_33112257_33115010_33115126_33118800
ES.13609.1	chr16	-	1472	2	Antisense	novelGene_ENSMUSG00000022808.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33072237	33070292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33070327_33070799
ES.1361.1	chr1	+	173	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGAAGAAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133417440	133417613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133417400_133417600
ES.13610.1	chr16	-	3022	1	Intergenic	novelGene_11432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATACAGGTACAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	33083433	33080411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33080400_33083400
ES.13611.1	chr16	-	202	1	Intergenic	novelGene_11433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33090638	33090436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33090400_33090600
ES.13612.1	chr16	-	1995	1	Antisense	novelGene_ENSMUSG00000022808.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCTGATAGAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	33106162	33104167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33104200_33106200
ES.13613.1	chr16	+	3628	1	Intergenic	novelGene_11434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGATGATAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	33158944	33162572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33158900_33162600
ES.13614.1	chr16	+	202	1	Intergenic	novelGene_11435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGCCTCAGAATCCTAGA	6906	False	NA	NA	False	NA	NA	NA	33192068	33192270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33192100_33192300
ES.13615.1	chr16	+	242	1	Intergenic	novelGene_11436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGGACTGAAAACAAA	NA	False	NA	NA	False	ATTAAA	-25	NA	33197248	33197490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33197200_33197500
ES.13616.1	chr16	+	185	1	Intergenic	novelGene_11437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAACAA	NA	False	NA	NA	False	NA	NA	NA	33198816	33199001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33198800_33199000
ES.13617.1	chr16	-	1877	3	NNC	ENSMUSG00000097318.3	novel	665	2	NA	NA	9	7808	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTAGAGCTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	33201036	33192415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33194022_33200608_33200729_33200885
ES.13617.2	chr16	-	714	3	NNC	ENSMUSG00000097318.3	novel	665	2	NA	NA	-12	6572	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	33201109	33193651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33194022_33200608_33200729_33200885
ES.13617.3	chr16	-	753	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	-13	-3	-13	2	multi-exon	FALSE	canonical	3	44	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAATTCTCTCCTTGTC	NA	False	NA	0	True	ATTAAA	-18	NA	33201110	33200221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33200750_33200885
ES.13617.4	chr16	-	732	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	-68	1	-16	0	multi-exon	FALSE	canonical	3	19	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGGAATTCTCTCCTT	NA	False	NA	-3	True	ATTAAA	-15	NA	33201113	33200224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33200729_33200885
ES.13618.1	chr16	+	7810	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-85	2105	-85	-2105	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGCTAGGATATTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	33201120	33322628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.10	chr16	+	7903	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-57	1984	-57	-1984	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTTGTATAGAACT	NA	False	NA	3	True	ATTAAA	-15	NA	33201148	33322749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.11	chr16	+	7564	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-57	2323	-57	-2323	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATACATACTGTGTAGTG	NA	False	NA	NA	False	AATAAA	-25	NA	33201148	33322410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.12	chr16	+	4001	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-53	-180	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.376107582514	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGGGCATTTTAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	33201152	33318833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277390_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.13	chr16	+	2841	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-18	7007	-18	0	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAAATAATACTGGCAC	NA	False	NA	NA	False	NA	NA	NA	33201187	33317726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.14	chr16	+	3952	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-15	5893	-15	-173	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTTTAATTGCTTAC	NA	False	NA	NA	False	ATTAAA	-25	NA	33201190	33318840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.15	chr16	+	7634	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-14	2210	-14	-2210	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGAGCACATTGGATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	33201191	33322523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.17	chr16	+	3858	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-14	-255	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.1852366061199	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAACCTGGTTTAATT	NA	False	NA	NA	False	AATAAA	-23	NA	33201191	33318758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316126
ES.13618.18	chr16	+	3420	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	0	579	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.376107582514	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTCCACTATTTAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	33201205	33318305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277390_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.19	chr16	+	7502	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	8	-2405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	49.8372350757945	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTACTTGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	33201213	33322328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316030
ES.13618.2	chr16	+	8745	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-74	1159	-74	-1159	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTAGCTGAATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	33201131	33323574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.21	chr16	+	6288	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	21	3521	-6	2199	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGATGTGAGTCTTCC	NA	False	NA	NA	False	TATAAA	-18	NA	33201226	33321212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.22	chr16	+	4185	8	ISM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	25	5902	-2	-182	intron_retention	FALSE	canonical	3	136	junction_3	8.90998064543581	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGAAATGGGCATTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	33201230	33318831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714
ES.13618.23	chr16	+	3948	8	NIC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	52.2079828128588	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACGAATGTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	33201231	33319013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33201398_33241690_33241773_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.24	chr16	+	4100	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.376107582514	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCACGAATGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33201232	33319012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277390_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.25	chr16	+	2488	5	ISM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	30	45729	3	23748	5prime_fragment	FALSE	canonical	3	136	junction_3	9.41740410091868	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTGTTGTTGTA	NA	False	NA	NA	False	AATAAA	-44	NA	33201235	33279004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245
ES.13618.26	chr16	+	3159	8	FSM	ENSMUSG00000022811.18	ENSMUST00000232023.2	2670	8	3	-492	3	492	multi-exon	FALSE	canonical	1	1	junction_4	51.6024837244353	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCCATATACCCTTGGT	NA	False	NA	NA	False	AATAAA	-22	NA	33201235	33318218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.27	chr16	+	6271	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	3	2202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.1852366061199	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTGAGTCTTCCTTT	NA	False	NA	NA	False	TATAAA	-21	NA	33201235	33321215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316126
ES.13618.28	chr16	+	1241	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	31	8558	4	-1551	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTAAACAGATGTGC	NA	False	NA	NA	False	CATAAA	-25	NA	33201236	33316175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.29	chr16	+	3361	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	5	581	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.1852366061199	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCCACTATTTAAAAGC	NA	False	NA	NA	False	AATAAA	-15	NA	33201237	33318307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316126
ES.13618.3	chr16	+	4540	8	ISM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-63	5635	-63	85	intron_retention	FALSE	canonical	3	136	junction_3	8.90998064543581	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATACACACTTTTAT	NA	False	NA	NA	False	NA	NA	NA	33201142	33319098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714
ES.13618.30	chr16	+	4164	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	49.8372350757945	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACGAATGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33201237	33319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316030
ES.13618.31	chr16	+	3469	10	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	11	-2114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	47.0542109213628	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTAGGCTGCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	33201243	33322619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115_33316519_33320727
ES.13618.32	chr16	+	3237	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	71	6522	44	485	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGATATGCCATATAC	NA	False	NA	NA	False	AATAAA	-15	NA	33201276	33318211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.33	chr16	+	8538	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	119	-1164	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.376107582514	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATAATTTTCTAGCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	33201351	33323569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277390_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.34	chr16	+	3418	9	NIC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-33	580	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.1371737849243	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTCCACTATTTAAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	33201466	33318306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33201674_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.35	chr16	+	7349	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-28	-2405	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTACTTGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	33201471	33322328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.36	chr16	+	4113	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-26	81	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATACACACTT	NA	False	NA	NA	False	NA	NA	NA	33201473	33319094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.37	chr16	+	4111	9	NIC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.1371737849243	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCACGAATGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33201479	33319012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33201674_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.38	chr16	+	7760	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-19	-1985	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCTGTTGTATAGAAC	NA	False	NA	2	True	ATTAAA	-14	NA	33201480	33322748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.39	chr16	+	3318	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-16	583	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCACTATTTAAAAGCCT	NA	False	NA	NA	False	AATAAA	-17	NA	33201483	33318309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.4	chr16	+	3474	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-61	6417	-61	590	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAAGCCTAATTACT	NA	False	NA	NA	False	AATAAA	-24	NA	33201144	33318316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.40	chr16	+	3198	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	-1	489	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	63.0094238983344	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATGCCATATACCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	33201498	33318215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316126
ES.13618.41	chr16	+	4421	9	NIC	ENSMUSG00000022811.18	novel	653	4	NA	NA	3	-247	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.1371737849243	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTAATTCTTCTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	33201502	33318766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33202253_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.42	chr16	+	7610	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	4	-2112	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGTAGGCTGCTAGGA	NA	False	NA	NA	False	AATAAA	-17	NA	33201503	33322621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.43	chr16	+	2593	1	Intergenic	novelGene_11438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTAAAATCACACTTCATA	NA	False	NA	NA	False	NA	NA	NA	33202434	33205027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33202400_33205000
ES.13618.44	chr16	+	3668	8	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	20875	251	20875	-251	3prime_fragment	FALSE	canonical	3	136	junction_2	9.32628499654255	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGGTTTAATTCTTC	NA	False	NA	NA	False	AATAAA	-27	NA	33241689	33318762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.45	chr16	+	2215	6	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	34380	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	59.39696961967	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCACGAATGTTTTTT	3759	False	NA	NA	False	AATAAA	-16	NA	33255194	33319012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33317400
ES.13618.46	chr16	+	1996	1	Intergenic	novelGene_11440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATATTGAACATAAATGAA	NA	False	NA	NA	False	AAAAAG	-5	NA	33273369	33275365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33273400_33275400
ES.13618.47	chr16	+	157	1	Intergenic	novelGene_11441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	33314392	33314549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33314400_33314500
ES.13618.48	chr16	+	4170	1	NIC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	94030	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACGAATGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33314844	33319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33314800_33319000
ES.13618.5	chr16	+	4329	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-61	5562	-61	158	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGCTCTACATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	33201144	33319171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.6	chr16	+	4174	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-61	5717	-61	3	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGAATGTTTTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	33201144	33319016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.7	chr16	+	9426	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	-61	465	-61	-465	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCACTGAGT	NA	False	NA	16	True	AATAAA	-17	NA	33201144	33324268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ES.13618.8	chr16	+	7993	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-60	-1982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	49.8372350757945	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTTGTATAGAACTGA	NA	False	NA	5	True	ATTAAA	-17	NA	33201145	33322751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316030
ES.13618.9	chr16	+	4240	9	NNC	ENSMUSG00000022811.18	novel	9830	9	NA	NA	-60	81	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.1852366061199	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATACACACTT	NA	False	NA	NA	False	NA	NA	NA	33201145	33319094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316126
ES.13619.1	chr16	-	3088	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33207721	33204420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33206233_33206445
ES.13619.2	chr16	-	3089	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33207721	33204420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33206227_33206438
ES.13619.3	chr16	-	2893	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	33207723	33204617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33206233_33206445
ES.13619.4	chr16	-	2892	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	33207722	33204618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33206227_33206438
ES.13619.5	chr16	-	1489	1	Intergenic	novelGene_11439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAGCCAGGCATGCAAT	NA	False	NA	NA	False	NA	NA	NA	33207722	33206233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33206200_33207700
ES.1362.1	chr1	+	182	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAACATTTAACAAA	NA	False	NA	NA	False	NA	NA	NA	133479588	133479770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133479600_133479800
ES.13620.1	chr16	+	2492	14	NNC	ENSMUSG00000035506.17	novel	3166	13	NA	NA	-6216	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6812228467181	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	8	True	AATAAA	-18	NA	33331481	33483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33331524_33332705_33332737_33336668_33336780_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33483294
ES.13620.10	chr16	+	3129	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	132	-8	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCATGACCAGGCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	33337829	33484497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.11	chr16	+	2192	11	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	137	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	18.7339264437544	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	8	True	AATAAA	-18	NA	33337834	33483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33483294
ES.13620.12	chr16	+	3092	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	143	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	17.7080882335979	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCAGGCTTGATAGTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	33337840	33484504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.13	chr16	+	2246	12	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	148	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	20.1441089146912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	8	True	AATAAA	-18	NA	33337845	33483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.14	chr16	+	2561	13	FSM	ENSMUSG00000035506.17	ENSMUST00000059056.15	3166	13	-124	729	-73	0	multi-exon	FALSE	canonical	3	33	junction_4	11.0754984838908	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATTTTTTATTA	NA	False	NA	7	True	AATAAA	-17	NA	33338574	33483776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.15	chr16	+	2223	11	NIC	ENSMUSG00000035506.17	novel	3166	13	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	20.7605394920267	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTGTTTTATTTTT	NA	False	NA	2	True	AATAAA	-12	NA	33338646	33483771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.16	chr16	+	3096	12	NIC	ENSMUSG00000035506.17	novel	3166	13	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	14.1923038159175	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCATGACCAGGCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	33338646	33484497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.17	chr16	+	2342	7	NNC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	-11894	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	21.2916258968951	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCAGGCTTGATAGTCA	4622	False	NA	NA	False	ATTAAA	-17	NA	33405037	33484504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33405127_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33483294
ES.13620.18	chr16	+	468	1	Intergenic	novelGene_11442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAACAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	33411105	33411573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33411100_33411600
ES.13620.19	chr16	+	4257	4	NIC	ENSMUSG00000035506.17	novel	2819	9	NA	NA	8443	-2	intron_retention	FALSE	canonical	3	48	junction_1	11.5854314646552	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTTTTATTTTTTAT	NA	False	NA	5	True	AATAAA	-15	NA	33445202	33483774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33445546_33466932_33470306_33478566_33478628_33483294
ES.13620.2	chr16	+	1371	6	NNC	ENSMUSG00000035506.17	novel	2070	11	NA	NA	-1409	-65811	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.1484806204694	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTTCCTAGTCCTCA	NA	False	NA	NA	False	NA	NA	NA	33336288	33379161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33336780_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33378949
ES.13620.3	chr16	+	3409	14	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	31	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	15.4644084592358	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGCTTGATAGTCACC	NA	False	NA	NA	False	ATTAAA	-19	NA	33337728	33484506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478684_33483294
ES.13620.4	chr16	+	2500	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	41	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	8	True	AATAAA	-18	NA	33337738	33483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.5	chr16	+	3338	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	47	-729	47	2	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGCTTGATAGTCACCT	NA	False	NA	NA	False	ATTAAA	-20	NA	33337744	33484507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.6	chr16	+	2598	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	57	1	57	1	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTTTTATTAT	NA	False	NA	8	True	AATAAA	-18	NA	33337754	33483777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ES.13620.7	chr16	+	2273	11	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	99	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	16.5665325279613	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTGTTTTATTTTT	NA	False	NA	2	True	AATAAA	-12	NA	33337796	33483771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33483294
ES.13620.8	chr16	+	2330	12	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	103	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	18.4999441589508	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTGTTTTATTTTT	NA	False	NA	2	True	AATAAA	-12	NA	33337800	33483771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33478566_33478628_33483294
ES.13620.9	chr16	+	2511	15	NNC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	105	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.4481625406046	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTATTGTTTTATTT	NA	False	NA	0	True	AATAAA	-10	NA	33337802	33483769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33337866_33338649_33338747_33344019_33344140_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445339_33466932_33467031_33470187_33470306_33478566_33478684_33483294
ES.13621.1	chr16	-	249	1	Intergenic	novelGene_11443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGACTAAACAAAACAA	NA	False	NA	NA	False	AAAAAG	-9	NA	33481355	33481106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33481100_33481400
ES.13622.1	chr16	+	5669	18	NNC	ENSMUSG00000075254.13	novel	4187	17	NA	NA	-82	-693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.99826952187445	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTATGTGTTTCTTTG	6741	False	NA	NA	False	NA	NA	NA	33504657	33588511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33505226_33513175_33513248_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.10	chr16	+	3592	14	NIC	ENSMUSG00000075254.13	novel	4187	17	NA	NA	21	62	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.97723115082517	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGCTGAGGACATGG	7019	False	NA	NA	False	AAAAAG	-25	NA	33504935	33581444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33505226_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127
ES.13622.11	chr16	+	111	1	Intergenic	novelGene_11444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAAACCA	960	False	NA	NA	False	NA	NA	NA	33519514	33519625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33519500_33519600
ES.13622.12	chr16	+	2446	1	Intergenic	novelGene_11446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTTTTTTTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	33534867	33537313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33534900_33537300
ES.13622.13	chr16	+	4058	17	NNC	ENSMUSG00000075254.13	novel	555	5	NA	NA	-17101	482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.98777428523732	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTTTTATGTCAAAG	NA	False	NA	NA	False	CATAAA	-31	NA	33534869	33587665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33534903_33535288_33535431_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.14	chr16	+	8643	18	NNC	ENSMUSG00000075254.13	novel	555	5	NA	NA	-17045	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.26946995567625	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGTAAGTGGTTTGG	NA	False	NA	NA	False	AATAAA	-42	NA	33534925	33591946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33535159_33535288_33535431_33535546_33535651_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.15	chr16	+	3460	1	Genic_Genomic	ENSMUSG00000075254.13	novel	NA	NA	NA	NA	-10136	2011	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	33541834	33545294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_33541800_33545300
ES.13622.16	chr16	+	4981	2	NIC	ENSMUSG00000075254.13	novel	3656	4	NA	NA	4253	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACGAGAGTGTAAGTGG	NA	False	NA	NA	False	AATAAA	-37	NA	33581145	33591941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33581216_33587030
ES.13622.2	chr16	+	5474	17	FSM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	42	-1329	42	-692	multi-exon	FALSE	canonical	2	4	junction_13	3.21130814466628	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTATGTGTTTCTTTGA	6865	False	NA	NA	False	NA	NA	NA	33504781	33588512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.3	chr16	+	3427	8	ISM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	43	34856	43	-8314	5prime_fragment	FALSE	canonical	2	6	junction_3	2.12852348939305	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTAATGTGCTCAT	6866	False	NA	NA	False	AAAAAG	-15	NA	33504782	33552327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968
ES.13622.4	chr16	+	4592	17	FSM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	80	-485	-16	485	multi-exon	FALSE	canonical	2	4	junction_13	3.21130814466628	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTTTATGTCAAAGTGA	6903	False	NA	NA	False	CATAAA	-34	NA	33504819	33587668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.5	chr16	+	5503	16	NIC	ENSMUSG00000075254.13	novel	4187	17	NA	NA	-5	-439	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	2.83940525853958	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTCTTGTTTGTGT	6914	False	NA	NA	False	NA	NA	NA	33504830	33588765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33587030
ES.13622.6	chr16	+	3758	9	NIC	ENSMUSG00000075254.13	novel	6714	17	NA	NA	33	-8188	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.91910385164772	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGTGTTTATCTGTT	6952	False	NA	NA	False	TTTAAA	-21	NA	33504868	33552453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33505226_33527285_33527577_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968
ES.13622.7	chr16	+	3614	9	NIC	ENSMUSG00000075254.13	novel	6714	17	NA	NA	-28	-8314	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.91910385164772	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTAATGTGCTCAT	6970	False	NA	NA	False	AAAAAG	-15	NA	33504886	33552327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33505226_33527285_33527577_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968
ES.13622.8	chr16	+	8795	17	FSM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	155	-4763	-20	0	multi-exon	FALSE	canonical	2	4	junction_13	3.21130814466628	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGTAAGTGGTTTGG	6978	False	NA	NA	False	AATAAA	-42	NA	33504894	33591946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ES.13622.9	chr16	+	3157	7	NIC	ENSMUSG00000075254.13	novel	4187	17	NA	NA	7	-8145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.94405318873308	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGTAAAATT	7005	False	NA	NA	False	NA	NA	NA	33504921	33552496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33505226_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968
ES.13623.1	chr16	-	176	1	Intergenic	novelGene_11445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACACA	NA	False	NA	NA	False	NA	NA	NA	33527779	33527603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33527600_33527800
ES.13624.1	chr16	-	2583	1	Antisense	novelGene_ENSMUSG00000075254.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33551932	33549349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_33549300_33551900
ES.13625.1	chr16	-	134	1	Intergenic	novelGene_11447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	33601704	33601570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33601600_33601700
ES.13626.1	chr16	+	2336	12	NNC	ENSMUSG00000022824.13	novel	2942	12	NA	NA	44	-859	intron_retention	FALSE	canonical	0	0	junction_1	1.23983469972599	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCCTTTGTAAGAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	33614450	33639438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33614942_33619324_33619948_33623401_33623531_33624949_33625057_33626392_33626449_33628237_33628405_33631254_33631378_33632135_33632263_33633248_33633287_33634888_33634974_33636043_33636240_33639244
ES.13626.2	chr16	+	178	2	Intergenic	novelGene_11449	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	33631633	33633113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33631643_33632944
ES.13626.3	chr16	+	182	1	Intergenic	novelGene_11450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	33632932	33633114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33632900_33633100
ES.13626.4	chr16	+	1721	4	NNC	ENSMUSG00000022824.13	novel	2969	13	NA	NA	19296	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTCCTTTCTTGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	33634032	33640298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33634419_33634888_33634974_33636043_33636240_33639244
ES.13627.1	chr16	-	320	1	Intergenic	novelGene_11448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATATCTTCTT	NA	False	NA	NA	False	NA	NA	NA	33618348	33618028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33618000_33618300
ES.13628.1	chr16	+	3100	15	NNC	ENSMUSG00000022817.16	novel	3282	15	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.5484268123068	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTAGATCTGATTACT	NA	False	NA	14	True	AATAAA	-15	NA	33649998	33769515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764550_33766860_33766981_33768084_33768252_33769026
ES.13628.10	chr16	+	2273	9	ISM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	13	37815	13	753	5prime_fragment	FALSE	canonical	3	194	junction_1	18.7466663703177	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTAACAGTGATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	33650059	33731708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834
ES.13628.11	chr16	+	6193	11	NIC	ENSMUSG00000022817.16	novel	3282	15	NA	NA	55	-2	intron_retention	FALSE	canonical	0	0	junction_7	67.977643383689	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATCTGATTACTGGTTCC	NA	False	NA	20	True	AATAAA	-21	NA	33650101	33769521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33740154_33740585_33760859_33761083_33764473_33768252_33769026
ES.13628.12	chr16	+	2141	11	NNC	ENSMUSG00000022817.16	novel	3282	15	NA	NA	187	15518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	66.4921799913343	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTACCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	33650233	33746473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33746122
ES.13628.14	chr16	+	3010	15	NNC	ENSMUSG00000022817.16	novel	631	6	NA	NA	13475	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	57.3378814838953	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTAGATCTGATTACTG	NA	False	NA	15	True	AATAAA	-16	NA	33663521	33769516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33663808_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.15	chr16	+	5899	6	NIC	ENSMUSG00000022817.16	novel	2130	11	NA	NA	-13973	-4	intron_retention	FALSE	canonical	3	197	junction_1	11.6206712370672	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGGTGTAGATCTGAT	2123	False	NA	10	True	AATAAA	-11	NA	33728882	33769511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33730970_33740154_33740585_33760859_33761083_33764473_33766981_33768084_33768252_33769026
ES.13628.16	chr16	+	1529	6	ISM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	27843	10	-2702	-2	3prime_fragment	FALSE	canonical	3	209	junction_4	8.76356092008266	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGTAGATCTGATTA	NA	False	NA	12	True	AATAAA	-13	NA	33740153	33769513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.3	chr16	+	3998	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-26	-690	-26	690	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGCTTCTTGGTCACG	NA	False	NA	NA	False	NA	NA	NA	33650008	33770398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.4	chr16	+	3136	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-25	171	-25	14	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGAGGGCTGTCTGCC	NA	False	NA	36	True	AATAAA	-37	NA	33650009	33769537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.5	chr16	+	3288	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	-6	0	-6	0	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTTGTGTTGGCTTTG	NA	False	NA	NA	False	AAAAAG	-17	NA	33650028	33769708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.7	chr16	+	3178	16	NNC	ENSMUSG00000022817.16	novel	3282	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.7827441434197	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATCTGATTACTGGTTCC	NA	False	NA	20	True	AATAAA	-21	NA	33650044	33769521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_33650401_33665355_33665442_33673635_33673729_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ES.13628.8	chr16	+	3043	15	FSM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	5	8	5	0	multi-exon	FALSE	canonical	2	19	junction_14	52.8724398714414	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTAGATCTGATTACT	NA	False	NA	14	True	AATAAA	-15	NA	33650051	33769515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768223_33769026
ES.13628.9	chr16	+	5354	14	NIC	ENSMUSG00000022817.16	novel	3282	15	NA	NA	7	-2	intron_retention	FALSE	canonical	3	194	junction_1	16.4169057041639	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGTAGATCTGATTA	NA	False	NA	12	True	AATAAA	-13	NA	33650053	33769513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33766981_33768084_33768252_33769026
ES.13629.1	chr16	-	183	1	Intergenic	novelGene_11451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	33721461	33721278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33721300_33721500
ES.1363.1	chr1	-	180	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATACTCTA	NA	False	NA	NA	False	NA	NA	NA	133496719	133496539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133496500_133496700
ES.13630.1	chr16	-	177	1	Intergenic	novelGene_11452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33745724	33745547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33745500_33745700
ES.13631.1	chr16	-	6543	7	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	2	3223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	449.096283910502	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAAGTGCTTGCTTTAT	8677	False	NA	NA	False	AATAAA	-28	NA	33787371	33771928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33772461_33772587_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.11	chr16	-	3328	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	-35	-10	0	-2	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8640	False	NA	NA	False	NA	NA	NA	33787408	33775153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ES.13631.12	chr16	-	5518	3	NIC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	47	junction_2	520	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8675	False	NA	NA	False	NA	NA	NA	33787373	33775153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33779422_33782611_33787195
ES.13631.13	chr16	-	7585	2	NIC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	129	junction_1	0	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTAGTCTCCTGCCT	8677	False	NA	NA	False	NA	NA	NA	33787371	33775153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33781938
ES.13631.14	chr16	-	5668	4	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	2	-4	intron_retention	FALSE	canonical	3	1087	junction_1	83.2839853886822	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCTGTAGTCTCCTGC	8677	False	NA	NA	False	NA	NA	NA	33787371	33775155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33779422_33782611_33784141_33784296_33787195
ES.13631.15	chr16	-	4966	5	NIC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	1087	junction_1	64.227622562259	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAACATCCTCTGTAG	8677	False	NA	NA	False	NA	NA	NA	33787371	33775163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33784296_33787195
ES.13631.16	chr16	-	3295	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	-18	207	-18	-195	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTGTAAGTTCCTCT	8622	False	NA	NA	False	NA	NA	NA	33787426	33775358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.17	chr16	-	3109	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	23	352	-12	-340	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTCTCCAATGTTTA	8663	False	NA	NA	False	AAGAAA	-15	NA	33787385	33775503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.18	chr16	-	2929	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	1	353	1	-353	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGTCACTGGAGATG	8676	False	NA	NA	False	AAGAAA	-2	NA	33787372	33775516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ES.13631.19	chr16	-	2873	5	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	-13	-462	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	532.568305478274	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGGCCAAATCAGTTCA	8662	False	NA	NA	False	ATTAAA	-14	NA	33787386	33775625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.2	chr16	-	1707	1	Intergenic	novelGene_11453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	33774153	33772446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33772400_33774200
ES.13631.20	chr16	-	4030	4	NIC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	6	-463	intron_retention	FALSE	canonical	3	47	junction_3	498.715015481454	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGGCCAAATCAGTTC	8681	False	NA	NA	False	ATTAAA	-13	NA	33787367	33775626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33779422_33779538_33780546_33782611_33787195
ES.13631.21	chr16	-	3008	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	1	475	1	-463	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGGCCAAATCAGTTC	8641	False	NA	NA	False	ATTAAA	-13	NA	33787407	33775626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.22	chr16	-	2853	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	-34	464	1	-464	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGGCCAAATCAGTT	8641	False	NA	NA	False	ATTAAA	-12	NA	33787407	33775627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ES.13631.23	chr16	-	2935	7	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	-7	-464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	449.096283910502	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGGCCAAATCAGTT	8633	False	NA	NA	False	ATTAAA	-12	NA	33787415	33775627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782398_33782477_33782611_33784141_33784296_33787195
ES.13631.24	chr16	-	2194	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	4	1286	4	-1274	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAATTGGGTGCCTCCT	8644	False	NA	NA	False	NA	NA	NA	33787404	33776437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.25	chr16	-	1728	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	-19	1775	-19	-1763	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGGGCTATACTGCT	8621	False	NA	NA	False	NA	NA	NA	33787427	33776926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.27	chr16	-	797	4	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	0	-1802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	589.311462640937	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33782485_33782611_33784141_33784296_33787195
ES.13631.28	chr16	-	1494	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	-13	1802	-13	-1802	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8662	False	NA	NA	False	NA	NA	NA	33787386	33776965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ES.13631.3	chr16	-	2893	1	Genic_Genomic	ENSMUSG00000022814.7	novel	NA	NA	NA	NA	11280	1951	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTTTGGTGTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	33776093	33773200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_33773200_33776100
ES.13631.30	chr16	-	1338	4	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	0	-1803	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	576.858734873626	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33781938_33782611_33784141_33784296_33787200
ES.13631.31	chr16	-	870	4	NNC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	5156	-1804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	560.977717917566	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAGACTGGTATTTGT	4954	False	NA	NA	False	NA	NA	NA	33782217	33776967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777289_33779443_33779538_33780546_33780723_33781938
ES.13631.32	chr16	-	1788	6	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	0	-1804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	475.727653179842	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAGACTGGTATTTGT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781783_33782611_33784141_33784296_33787195
ES.13631.33	chr16	-	8274	2	ISM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	14	1805	14	-1805	intron_retention	FALSE	canonical	3	1087	junction_1	0	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAAGACTGGTATTTG	8689	False	NA	NA	False	NA	NA	NA	33787359	33776968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_33777306_33779422
ES.13631.34	chr16	-	1166	6	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	-1	-1805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	469.825329244816	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAAGACTGGTATTTG	8674	False	NA	NA	False	NA	NA	NA	33787374	33776968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782244_33784241_33784296_33787195
ES.13631.35	chr16	-	3855	4	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	2	-1805	intron_retention	FALSE	canonical	3	1087	junction_1	83.2839853886822	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAAGACTGGTATTTG	8677	False	NA	NA	False	NA	NA	NA	33787371	33776968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33779422_33782611_33784141_33784296_33787195
ES.13631.36	chr16	-	1186	3	NIC	ENSMUSG00000022814.7	novel	3283	5	NA	NA	0	-1806	combination_of_known_splicesites	FALSE	canonical	3	47	junction_2	41	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAAGACTGGTATTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33781938_33782611_33787195
ES.13631.37	chr16	-	1571	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	37	1876	2	-1864	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGTCTAACTTGTAAT	8677	False	NA	NA	False	NA	NA	NA	33787371	33777027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.38	chr16	-	1309	3	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	37	6480	2	-6468	5prime_fragment	FALSE	canonical	3	1206	junction_2	42	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCAGAAGGTGTCTTG	8677	False	NA	NA	False	CATAAA	-15	NA	33787371	33781631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_33782611_33784141_33784296_33787195
ES.13631.4	chr16	-	4270	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	3	-789	3	789	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGGCAGAATTCTTTTC	8643	False	NA	NA	False	NA	NA	NA	33787405	33774362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.5	chr16	-	3781	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	28	-325	-7	325	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTTGTGAACCATCA	8668	False	NA	NA	False	NA	NA	NA	33787380	33774826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.6	chr16	-	3663	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	37	-216	2	216	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTTTGGCAAGGTTAT	8677	False	NA	NA	False	GGGGCT	-25	NA	33787371	33774935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.7	chr16	-	3507	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	-23	0	-23	0	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	8617	False	NA	NA	False	NA	NA	NA	33787431	33775151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ES.13631.8	chr16	-	3503	6	NNC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	479.492648535929	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	8886	False	NA	NA	False	NA	NA	NA	33787162	33775151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33786930
ES.13631.9	chr16	-	3156	4	NIC	ENSMUSG00000022814.7	novel	3484	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	129	junction_1	528.615171935123	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	8677	False	NA	NA	False	NA	NA	NA	33787371	33775151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33777306_33781938_33782611_33784141_33784296_33787195
ES.13632.1	chr16	+	178	1	Intergenic	novelGene_11454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCTTCTCCA	3167	False	NA	NA	False	NA	NA	NA	33802667	33802845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_33802700_33802800
ES.13633.1	chr16	+	178	1	Intergenic	novelGene_11457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAACCAATGGGGAA	NA	False	NA	NA	False	NA	NA	NA	34102049	34102227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34102000_34102200
ES.13634.1	chr16	-	3183	10	NNC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	-16120	1176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.03040205505508	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTTTCATGTCATCGTG	3723	False	NA	NA	False	AATATA	-22	NA	33815216	33794356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33815164
ES.13634.10	chr16	-	2848	20	NIC	ENSMUSG00000061751.17	novel	3207	16	NA	NA	-12516	41	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.0659068145728	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCATTGATTATCTCTT	NA	False	NA	NA	False	NA	NA	NA	33996165	33830062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33830309_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.11	chr16	-	2500	17	NNC	ENSMUSG00000061751.17	novel	3207	16	NA	NA	-20	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5170991723003	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCATTGATTATCTCTT	NA	False	NA	NA	False	NA	NA	NA	33916377	33830062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33830309_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
ES.13634.12	chr16	-	3050	19	NNC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12539	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_16	9.12752586383965	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAAGGTTAGTTGACCCT	NA	False	NA	6	True	AATAAA	-28	NA	33996188	33833499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.13	chr16	-	5245	18	NNC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12558	-2	intron_retention	FALSE	canonical	1	7	junction_15	8.96050542321394	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCAAAGGTTAGTTGA	NA	False	NA	2	True	AATAAA	-24	NA	33996207	33833503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.14	chr16	-	3020	19	NNC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12356	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	10.3881461410068	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCAAAGGTTAGTTGA	NA	False	NA	2	True	AATAAA	-24	NA	33996005	33833503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33995944
ES.13634.15	chr16	-	2695	16	NNC	ENSMUSG00000061751.17	novel	2690	16	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	6.90700127889569	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	False	NA	0	True	AATAAA	-22	NA	33916396	33833505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
ES.13634.17	chr16	-	2947	15	NIC	ENSMUSG00000061751.17	novel	3857	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	14	junction_1	6.13662474535523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGGTCAAAGGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	33916367	33833506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ES.13634.18	chr16	-	2782	17	FSM	ENSMUSG00000061751.17	ENSMUST00000114966.8	3857	17	1075	0	13	0	multi-exon	FALSE	canonical	2	3	junction_13	10.0343161201947	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGGTCAAAGGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	33916385	33833506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33870199_33870293_33873929_33874035_33875201_33875486_33916165
ES.13634.2	chr16	-	4775	9	NNC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	-17105	1176	intron_retention	FALSE	canonical	0	0	junction_1	1.11803398874989	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTTTCATGTCATCGTG	2738	False	NA	NA	False	AATATA	-22	NA	33816201	33794356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33816076
ES.13634.20	chr16	-	3249	18	NIC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12474	1	intron_retention	FALSE	canonical	1	7	junction_15	9.1877758414915	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTTAATGAGGTCAA	NA	False	NA	-9	True	AATAAA	-13	NA	33996123	33833514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.22	chr16	-	2403	15	NNC	ENSMUSG00000061751.17	novel	2690	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	9.58208362156229	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATGTTTTAATGAGGT	NA	False	NA	-12	True	AATAAA	-10	NA	33916400	33833517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33916165
ES.13634.24	chr16	-	3077	20	NIC	ENSMUSG00000061751.17	novel	7636	49	NA	NA	-12488	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	10.7698152104662	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATGTTTTAATGAGGT	NA	False	NA	-12	True	AATAAA	-10	NA	33996137	33833517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33870199_33870293_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.27	chr16	-	2505	16	NNC	ENSMUSG00000061751.17	novel	2693	16	NA	NA	-20	-205	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6.64195419703837	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATATTCCTTTTCCTTA	NA	False	NA	NA	False	AATATA	-17	NA	33916418	33833720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
ES.13634.28	chr16	-	1997	14	ISM	ENSMUSG00000061751.17	ENSMUST00000232157.2	2690	16	21	3128	-20	-3128	5prime_fragment	FALSE	canonical	3	19	junction_12	5.07692307692308	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATTGTTTTTATTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	33916377	33836643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ES.13634.29	chr16	-	159	1	Intergenic	novelGene_11455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGACAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	33892492	33892333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_33892300_33892500
ES.13634.3	chr16	-	5746	28	NIC	ENSMUSG00000061751.17	novel	8940	60	NA	NA	-12529	1176	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.1688413060644	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTTTCATGTCATCGTG	NA	False	NA	NA	False	AATATA	-22	NA	33996178	33794356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.30	chr16	-	4707	25	NNC	ENSMUSG00000061751.17	novel	4677	25	NA	NA	-19769	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.40725329260975	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTTGATATATAGTGA	NA	False	NA	-2	True	AATAAA	-14	NA	34103339	33972394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33973876_33991641_33991745_33994754_33994898_33996098_33996201_33996636_33996828_33998665_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554_34019622_34024230_34024350_34025517_34025701_34032527_34032651_34033160_34033277_34035384_34035500_34038165_34038316_34040425_34040618_34047396_34047517_34055614_34055782_34064140_34064337_34072594_34072770_34076560_34076731_34082997_34083190_34103212
ES.13634.31	chr16	-	151	1	Intergenic	novelGene_11456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAATAATAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	34014799	34014648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34014600_34014800
ES.13634.4	chr16	-	5787	29	NNC	ENSMUSG00000061751.17	novel	8940	60	NA	NA	-12516	1173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.2634221582116	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGGTTTCATGTCATC	NA	False	NA	NA	False	AATATA	-19	NA	33996165	33794359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33829639_33829700_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33936591_33936836_33991641_33991745_33994754_33994898_33996098
ES.13634.5	chr16	-	3234	10	NNC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	-17087	1172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.05409255338946	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGGGTTTCATGTCAT	2756	False	NA	NA	False	AATATA	-18	NA	33816183	33794360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33816076
ES.13634.6	chr16	-	5441	26	NNC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	13	1164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9314895111758	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTAAACCGGGTTT	NA	False	NA	NA	False	AATATA	-10	NA	33916385	33794368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33829639_33829700_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874032_33875201_33875486_33916165
ES.13634.7	chr16	-	3173	10	NNC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	-16150	1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.03040205505508	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTGTAAACCGGG	3693	False	NA	NA	False	AATATA	-7	NA	33815246	33794371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_33796450_33797895_33798035_33803057_33803259_33805544_33805624_33807455_33807621_33809139_33809272_33810137_33810260_33813228_33813401_33814005_33814034_33815189
ES.13634.8	chr16	-	474	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	222	-81	222	81	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	33827605	33827131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_33827100_33827600
ES.13634.9	chr16	-	1961	6	NIC	ENSMUSG00000061751.17	novel	10438	27	NA	NA	-12325	1396	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	14.2126704035519	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCAAAATAATTTCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	33849189	33828707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_33829700_33830891_33831016_33834327_33834582_33836761_33837001_33848307_33848480_33849009
ES.13635.1	chr16	+	163	1	Intergenic	novelGene_11458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTAGGACCTGT	NA	False	NA	NA	False	NA	NA	NA	34475638	34475801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34475600_34475800
ES.13636.1	chr16	+	174	1	Intergenic	novelGene_11459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAGAAATGAATT	NA	False	NA	NA	False	NA	NA	NA	34476762	34476936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34476800_34476900
ES.13637.1	chr16	-	567	2	Antisense	novelGene_ENSMUSG00000022832.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGTCTTAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	34488798	34477890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_34478284_34488624
ES.13638.1	chr16	+	4174	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	-59	-8	-59	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTACTTATTTTGA	NA	False	NA	15	True	AATATA	-24	NA	34510926	34545572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.10	chr16	+	4023	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	42.0088449681202	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34511079	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529880_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.11	chr16	+	4156	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	42.7567408590609	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATACGTGAATTTGTTTA	NA	False	NA	5	True	AATATA	-14	NA	34511079	34545562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527400_34529880_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.12	chr16	+	6638	12	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	110	junction_6	19.1112445806517	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	7	True	AATATA	-16	NA	34511080	34545564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.13	chr16	+	4415	12	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1	junction_8	61.749159327767	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34511080	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517757_34525198_34525418_34525530_34525630_34526756_34527268_34529893_34530036_34535707_34535779_34536322_34536414_34541808_34542028_34542106_34542240_34543379
ES.13638.14	chr16	+	3309	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.6029450658866	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCAAGTTTTACCTT	NA	False	NA	NA	False	AATAAA	-23	NA	34511080	34544933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527198_34529893_34530036_34535707_34535779_34541808_34542028_34542108_34542240_34543379
ES.13638.15	chr16	+	4169	14	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.6316888818534	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATACGTGAATTTGTT	NA	False	NA	3	True	AATATA	-12	NA	34511080	34545560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34514237_34514399_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.16	chr16	+	4324	11	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	110	junction_4	18.612898753284	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGAATTTGTTTACTT	NA	False	NA	8	True	AATATA	-17	NA	34511080	34545565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.17	chr16	+	3248	14	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.1122003516168	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAATAACCAAGTTTTAC	NA	False	NA	NA	False	AATAAA	-20	NA	34511080	34544930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34526816_34526945_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.18	chr16	+	5206	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	-21	-1186	1	1186	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGGTCTTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	34511080	34546758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.19	chr16	+	3982	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.6945837571767	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGAATTTGTTTACTT	NA	False	NA	8	True	AATATA	-17	NA	34511080	34545565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511180_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525419_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542018_34542106_34542240_34543379
ES.13638.2	chr16	+	3303	9	FSM	ENSMUSG00000022833.8	ENSMUST00000232489.2	3156	9	-145	-2	-51	2	multi-exon	FALSE	canonical	3	110	junction_6	18.5050668736971	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTAGATATGTTTC	NA	False	NA	NA	False	NA	NA	NA	34510934	34531788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893
ES.13638.20	chr16	+	5499	10	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	3	intron_retention	FALSE	canonical	2	3	junction_4	42.980903023219	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGAATTTGTTTACTTAT	NA	False	NA	10	True	AATATA	-19	NA	34511080	34545567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34517757_34525198_34525418_34525530_34525630_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.21	chr16	+	5143	12	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	110	junction_6	19.6905817147301	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	7	True	AATATA	-16	NA	34511080	34545564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.22	chr16	+	3299	12	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-13	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	40.0771982326836	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATGCTAAATAACCAAG	NA	False	NA	NA	False	AATAAA	-14	NA	34511080	34544924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.23	chr16	+	6724	11	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	110	junction_5	19.0076300469048	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCATACGTGAATTTGT	NA	False	NA	2	True	AATATA	-11	NA	34511080	34545559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517757_34525198_34525418_34525530_34525626_34526756_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.24	chr16	+	2052	10	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	2	-507	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	45.3352396113364	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTAGAATATTTTAACA	NA	False	NA	NA	False	AATAAA	-13	NA	34511081	34544430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.25	chr16	+	4658	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	53.8390089887332	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACGTGAATTTGTTTAC	NA	False	NA	6	True	AATATA	-15	NA	34511081	34545563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529880_34530036_34535707_34536414_34541808_34542028_34542106_34542240_34543379
ES.13638.26	chr16	+	3646	12	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	2	-452	intron_retention	FALSE	canonical	3	7	junction_10	42.6465388129831	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTGCTGAGAGAAGAAAG	NA	False	NA	NA	False	TATAAA	-21	NA	34511081	34544485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34536414_34541808_34542240_34543379
ES.13638.27	chr16	+	4025	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	41.0304764778573	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATACGTGAATTTGTT	NA	False	NA	3	True	AATATA	-12	NA	34511082	34545560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542259_34543379
ES.13638.29	chr16	+	5364	14	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	4	1182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.3599655714529	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGCCTTTGGTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	34511083	34546754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34514237_34514399_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525630_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.3	chr16	+	3531	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	-49	625	-49	2	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTTTTACCTTAGTAAT	NA	False	NA	NA	False	AATAAA	-29	NA	34510936	34544939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.30	chr16	+	5225	11	NNC	ENSMUSG00000022833.8	novel	4601	12	NA	NA	5	-1	intron_retention	FALSE	canonical	3	7	junction_9	44.7231483686021	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTTTTACCTTAGT	NA	False	NA	NA	False	AATAAA	-26	NA	34511084	34544936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34527268_34529893_34530036_34535707_34536414_34541808_34542240_34543379
ES.13638.32	chr16	+	4700	11	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	5	1697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	67.7324885117917	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTTCTCATCCTTCCT	NA	False	NA	NA	False	CATAAA	-14	NA	34511084	34547269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542108_34542240_34543379_34546843_34547028
ES.13638.33	chr16	+	4226	12	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	-5	-3	intron_retention	FALSE	canonical	2	3	junction_7	43.0707662932866	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34511096	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529880_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.34	chr16	+	3165	10	NIC	ENSMUSG00000022833.8	novel	3999	13	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	45.3352396113364	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGAATTTGTTTACTTAT	NA	False	NA	10	True	AATATA	-19	NA	34511105	34545567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.35	chr16	+	4071	14	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	52.0800476281152	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34511109	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34536322_34536414_34541808_34542028_34542106_34542240_34543379
ES.13638.36	chr16	+	3324	13	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	49	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	42.0088449681202	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCAAGTTTTACCTT	NA	False	NA	NA	False	AATAAA	-23	NA	34511150	34544933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529880_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.37	chr16	+	4517	5	NIC	ENSMUSG00000022833.8	novel	4601	12	NA	NA	1116	-51	intron_retention	FALSE	canonical	3	118	junction_3	17.4696164811939	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAAGATTTATTCAT	NA	False	NA	-44	True	ATTAAA	-14	NA	34525528	34545513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34527268_34529893_34530036_34535707_34535779_34541808_34542240_34543379
ES.13638.38	chr16	+	3566	1	NIC	ENSMUSG00000022833.8	novel	4601	12	NA	NA	3801	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAAGAATTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	34528213	34531779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34528200_34531800
ES.13638.39	chr16	+	2664	2	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	17345	-3	intron_retention	FALSE	canonical	3	162	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34541757	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34542240_34543379
ES.13638.4	chr16	+	3963	14	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.1122003516168	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGAATTTGTTTACTT	NA	False	NA	8	True	AATATA	-17	NA	34510939	34545565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34526816_34527006_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.5	chr16	+	3999	12	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	-15	-50	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	40.0771982326836	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAGATTTATTCATT	NA	False	NA	-43	True	ATTAAA	-15	NA	34510970	34545514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ES.13638.7	chr16	+	4093	12	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	110	junction_6	18.8315718720863	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGAATTTGTTTACTT	NA	False	NA	8	True	AATATA	-17	NA	34511079	34545565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542240_34543379
ES.13638.9	chr16	+	5134	12	NNC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_8	56.4241610519219	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACGTGAATTTGTTT	NA	False	NA	4	True	AATATA	-13	NA	34511079	34545561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529895_34530036_34535707_34535779_34541822_34542028_34542106
ES.13639.1	chr16	-	193	1	Antisense	novelGene_ENSMUSG00000022833.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACCTGCAATTTTA	NA	False	NA	NA	False	NA	NA	NA	34528133	34527940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_34527900_34528100
ES.1364.1	chr1	+	3970	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGGCTGGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	133540608	133544578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133540600_133544600
ES.1364.2	chr1	+	568	1	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAACAAACAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	133543130	133543698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133543100_133543700
ES.13640.1	chr16	-	162	1	Intergenic	novelGene_11460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	34590415	34590253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34590300_34590400
ES.13641.1	chr16	+	187	1	Intergenic	novelGene_11461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAAAAAAGC	673	False	NA	NA	False	NA	NA	NA	34650625	34650812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34650600_34650800
ES.13642.1	chr16	+	2328	16	NIC	ENSMUSG00000022836.12	novel	801	6	NA	NA	5	-771	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	5508	False	NA	NA	False	AAAAAG	-19	NA	34750716	34820962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34750790_34759295_34759383_34773148_34773200_34773948_34774077_34776752_34776907_34783913_34784217_34791611_34791645_34791743_34791838_34792188_34792393_34797254_34797473_34799541_34799666_34806810_34806964_34809251_34809376_34815443_34815574_34817094_34817227_34820642
ES.13643.1	chr16	-	1432	2	NNC	ENSMUSG00000100593.2	novel	588	3	NA	NA	-1297	808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAATCAAAGTA	NA	False	NA	NA	False	AATAAA	-12	NA	34760996	34755415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_34756631_34760779
ES.13644.1	chr16	-	174	1	Intergenic	novelGene_11462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATGCCATCA	NA	False	NA	NA	False	NA	NA	NA	34826255	34826081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34826100_34826300
ES.13645.1	chr16	+	3091	1	Intergenic	novelGene_11464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTTGTCTTGGCTCGT	NA	False	NA	NA	False	NA	NA	NA	34834111	34837202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34834100_34837200
ES.13645.10	chr16	+	919	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	712.847978183287	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842799	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34842970_34846201_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.11	chr16	+	992	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	2	-2633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	695.066212673296	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842801	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920280_34922315_34922495_34926684
ES.13645.13	chr16	+	954	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	2	-2633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	706.755686216956	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842801	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920131_34920248_34922315_34922495_34926684
ES.13645.14	chr16	+	3698	7	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	2	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	675.835039044292	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTCTGATCTGGAGC	NA	False	NA	NA	False	AATAAA	-15	NA	34842801	34929542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34883149_34883278_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.15	chr16	+	966	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	4	-2633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842803	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895949_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.16	chr16	+	901	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	4	-2690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAACAAAATAAAA	NA	False	NA	-21	True	NA	NA	NA	34842803	34926857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.17	chr16	+	740	5	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	4	-2690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	625.379484793033	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAACAAAATAAAA	NA	False	NA	-21	True	NA	NA	NA	34842803	34926857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34920179_34920248_34922315_34922495_34926684
ES.13645.18	chr16	+	3566	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGGTCTGATCTGGAG	NA	False	NA	NA	False	AATAAA	-14	NA	34842804	34929541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.19	chr16	+	3106	3	FSM	ENSMUSG00000035376.11	ENSMUST00000231516.2	389	3	6	-2723	6	2723	multi-exon	FALSE	canonical	3	1246	junction_2	58	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTTGAGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	34842805	34871877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34843006_34846194_34846313_34869089
ES.13645.2	chr16	+	2855	5	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-8685	-2633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	630.35882638383	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34834112	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34836348_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.20	chr16	+	936	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	19	-2633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842818	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895964_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.21	chr16	+	3625	1	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-772	2683	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAATGAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34868212	34871837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34868200_34871800
ES.13645.22	chr16	+	1352	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	13714	-2633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	712.603283742083	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34882698	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34883278_34884847_34885001_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.3	chr16	+	3407	1	Intergenic	novelGene_11465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTGCTTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34834164	34837571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_34834200_34837600
ES.13645.4	chr16	+	1034	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-25	-2588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATCCTAGCTGGTCCT	NA	False	NA	81	True	NA	NA	NA	34842772	34926959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.5	chr16	+	3603	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	706.755686216956	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTGGAGCCATGTTG	NA	False	NA	NA	False	AATAAA	-22	NA	34842791	34929549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896069_34920131_34920248_34922315_34922495_34926684
ES.13645.6	chr16	+	952	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-6	-2633	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842791	34926914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.7	chr16	+	3609	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCCATGTTGCAAGAAT	NA	False	NA	NA	False	AATAAA	-29	NA	34842794	34929556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.8	chr16	+	4482	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	1	886	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTTTTTTTCTTTTTA	NA	False	NA	NA	False	AGTAAA	-22	NA	34842798	34930433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895957_34896065_34920125_34920248_34922315_34922495_34926684
ES.13645.9	chr16	+	3583	6	NNC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	574.173980601699	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGGTCTGATCTGGAG	NA	False	NA	NA	False	AATAAA	-14	NA	34842798	34929541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34843006_34846194_34846313_34895964_34896065_34920125_34920248_34922315_34922495_34926684
ES.13646.1	chr16	-	738	4	NNC	ENSMUSG00000116840.2	novel	544	5	NA	NA	-95	-9170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGACTGTTTACG	NA	False	NA	NA	False	NA	NA	NA	34843365	34833137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_34833233_34833293_34833447_34838977_34839076_34842973
ES.13646.2	chr16	-	232	1	Intergenic	novelGene_11463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCCTTCTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	34833941	34833709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34833700_34833900
ES.13647.1	chr16	-	1704	1	Intergenic	novelGene_11466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGGAAAAGAAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	34845494	34843790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34843800_34845500
ES.13648.1	chr16	-	4610	1	Antisense	novelGene_ENSMUSG00000035376.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGAAAAGGAAAGATAATA	NA	False	NA	NA	False	NA	NA	NA	34870871	34866261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_34866300_34870900
ES.13649.1	chr16	-	463	1	Intergenic	novelGene_11467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34874736	34874273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34874300_34874700
ES.1365.10	chr1	-	2861	4	FSM	ENSMUSG00000090553.9	ENSMUST00000164096.2	669	4	15	-2207	-2	-4	multi-exon	FALSE	canonical	3	3763	junction_2	133.057214093119	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTACATTGTTTCAT	NA	False	NA	-18	True	AATAAA	-21	NA	133537972	133531617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133534318_133536634_133536698_133537455_133537483_133537901
ES.1365.11	chr1	-	470	5	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1883.38622897695	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTTACATTGTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	133538002	133531618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537451_133537483_133537901
ES.1365.12	chr1	-	373	4	FSM	ENSMUSG00000090553.9	ENSMUST00000166291.8	360	4	-18	5	-1	-5	multi-exon	FALSE	canonical	3	110	junction_1	1734.66788367879	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTTACATTGTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	133537988	133531618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133531815_133536634_133536698_133537455_133537483_133537901
ES.1365.13	chr1	-	1717	1	NIC	ENSMUSG00000090553.9	novel	503	5	NA	NA	14	300	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133538015	133536298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133536300_133538000
ES.1365.2	chr1	-	3103	4	FSM	ENSMUSG00000090553.9	ENSMUST00000164096.2	669	4	-2	-2432	-2	216	multi-exon	FALSE	canonical	3	3763	junction_2	133.057214093119	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGATGTACTCATCAG	NA	False	NA	NA	False	AATAAA	-16	NA	133537989	133531392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133534318_133536634_133536698_133537455_133537483_133537901
ES.1365.3	chr1	-	720	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	-1	-216	-1	216	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGATGTACTCATCAG	NA	False	NA	NA	False	AATAAA	-16	NA	133538030	133531392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ES.1365.5	chr1	-	3738	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	-3236	1	-3236	-1	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTTCATTCTGGTGG	NA	False	NA	-10	True	AATAAA	-29	NA	133541265	133531609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ES.1365.7	chr1	-	443	4	NNC	ENSMUSG00000090553.9	novel	653	4	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	2129.83447452822	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTTCATTCTGGTGG	NA	False	NA	-10	True	AATAAA	-29	NA	133538015	133531609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133531815_133534238_133534318_133536634_133536698_133537919
ES.1365.8	chr1	-	3325	3	ISM	ENSMUSG00000090553.9	ENSMUST00000164096.2	669	4	-28	-2209	14	-2	intron_retention	FALSE	canonical	3	3763	junction_2	152.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACATTGTTTCATTC	NA	False	NA	-16	True	AATAAA	-23	NA	133538015	133531615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_133534318_133536634_133536698_133537455
ES.1365.9	chr1	-	456	5	NNC	ENSMUSG00000090553.9	novel	503	5	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	1	46	junction_2	1833.35653583802	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTACATTGTTTCAT	NA	False	NA	-18	True	AATAAA	-21	NA	133538002	133531617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133531815_133534238_133534318_133536645_133536698_133537455_133537483_133537901
ES.13650.1	chr16	-	3167	1	Intergenic	novelGene_11468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTAGAGAGCTTTTTTT	NA	False	NA	NA	False	AAGAAA	-39	NA	34886534	34883367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34883400_34886500
ES.13651.1	chr16	-	2051	1	Intergenic	novelGene_11469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGAGTTTTGGTAAAC	NA	False	NA	NA	False	NA	NA	NA	34916167	34914116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34914100_34916200
ES.13652.1	chr16	-	150	1	Intergenic	novelGene_11470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	34963939	34963789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_34963800_34963900
ES.13653.1	chr16	+	5683	21	FSM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	-20	1345	-20	-1345	multi-exon	FALSE	canonical	1	2	junction_2	1.74570902500961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTTTAGACTATGCTAGT	NA	False	NA	NA	False	AATAAA	-22	NA	34975226	35124763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
ES.13653.2	chr16	+	5757	21	NNC	ENSMUSG00000022840.10	novel	7008	21	NA	NA	4	-1345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	2.04633819296811	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTTTAGACTATGCTAGT	NA	False	NA	NA	False	AATAAA	-22	NA	34975250	35124763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113516_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
ES.13653.3	chr16	+	5815	21	FSM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	10	1183	10	-1183	multi-exon	FALSE	canonical	1	2	junction_2	1.74570902500961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATTCTATTAGGAAGC	NA	False	NA	NA	False	AATATA	-16	NA	34975256	35124925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
ES.13653.4	chr16	+	5245	21	FSM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	1763	0	1763	0	multi-exon	FALSE	canonical	1	2	junction_2	1.74570902500961	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTGGTCTGATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	34977009	35126108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
ES.13653.5	chr16	+	3660	7	NIC	ENSMUSG00000022840.10	novel	7008	21	NA	NA	9679	-5949	intron_retention	FALSE	canonical	1	2	junction_6	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCTACATTTTTATACA	6939	False	NA	NA	False	AGTAAA	-23	NA	35100710	35120159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35114465_35118716_35118981_35119822
ES.13654.1	chr16	-	7846	1	Antisense	novelGene_ENSMUSG00000116766.2_AS_novelGene_ENSMUSG00000022840.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCAGAAAACCAGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	35106315	35098469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35098500_35106300
ES.13654.11	chr16	-	3978	7	NNC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	1	651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.1861653591616	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGTGGTCTTCCAAAT	NA	False	NA	-25	True	AATACA	-12	NA	35184216	35133782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35134658_35149867_35149984_35167968_35168164_35169200_35169365_35179345_35181752_35181930_35182130_35184193
ES.13654.2	chr16	-	4442	8	NNC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	32	26390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.4248509381472	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGGTGTTTATTACA	NA	False	NA	NA	False	AAAACA	-29	NA	35184256	35105110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35107051_35108704_35108917_35120274_35120385_35128433_35128556_35132977_35134658_35149867_35149984_35181930_35182130_35184193
ES.13654.3	chr16	-	7116	8	NNC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	8	11252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6977976232829	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTTTGTTAACTGAGT	NA	False	NA	NA	False	CATAAA	-13	NA	35184209	35120248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35120385_35128433_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ES.13654.4	chr16	-	3993	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	-2	1	-2	-1	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAACCTTTGCCCACTT	NA	False	NA	NA	False	ATTAAA	-32	NA	35184290	35131501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ES.13654.5	chr16	-	3406	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	62	524	-4	-524	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCTGGGTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	35184226	35132024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ES.13654.6	chr16	-	1735	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	-19	2276	-19	657	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCTTCCAAATTCTTAT	NA	False	NA	-19	True	AATACA	-18	NA	35184307	35133776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ES.13654.7	chr16	-	1373	5	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-16	657	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	36.3077126792642	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCTTCCAAATTCTTAT	NA	False	NA	-19	True	AATACA	-18	NA	35184304	35133776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35181930_35182130_35184193
ES.13654.8	chr16	-	1850	6	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-8	653	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	38.6025905866433	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGTCTTCCAAATTC	NA	False	NA	-23	True	AATACA	-14	NA	35184193	35133780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35134658_35139173_35139240_35167968_35168164_35169200_35169365_35181930_35182130_35183844
ES.13654.9	chr16	-	1507	6	NIC	ENSMUSG00000034473.15	novel	3992	7	NA	NA	-27	651	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	34.2893569493509	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGTGGTCTTCCAAAT	NA	False	NA	-25	True	AATACA	-12	NA	35184249	35133782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35181930_35182130_35184193
ES.13655.1	chr16	+	900	1	Intergenic	novelGene_11471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGGTCACTATGGTT	NA	False	NA	NA	False	NA	NA	NA	35184411	35185311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35184400_35185300
ES.13656.1	chr16	-	2621	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-5	-807	-5	807	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAGTAAAGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	35311248	35216874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.10	chr16	-	1712	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	178.143891542062	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTAGAGTATGTTTT	NA	False	NA	-9	True	AATAAA	-15	NA	35311255	35217680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ES.13656.11	chr16	-	1893	18	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	177.801101891721	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311253	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35300512_35300588_35311098
ES.13656.12	chr16	-	10962	15	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	428	junction_5	49.8743830200701	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311246	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.13	chr16	-	1673	16	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	182.874042869828	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311245	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ES.13656.15	chr16	-	1784	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	185.356992972345	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311238	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230823_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311115
ES.13656.17	chr16	-	1808	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	138.930232041122	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311251	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273828_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.18	chr16	-	1787	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	179.236826137237	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311254	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276406_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ES.13656.19	chr16	-	2321	17	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	214	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_16	182.676455790011	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35310745	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35310068
ES.13656.2	chr16	-	1858	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	-40	-9	-40	9	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATGTTTTCACGAGCC	NA	False	NA	-1	True	AATAAA	-23	NA	35311283	35217672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.20	chr16	-	1971	20	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	142	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	223.252760372297	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311101	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35289454_35289545_35292934_35292971_35310068_35310189_35311039
ES.13656.21	chr16	-	4149	16	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	1	junction_14	244.288627105998	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311266	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35230806_35231296_35231368_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35292934_35292971_35311189
ES.13656.22	chr16	-	1807	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	139.5187599393	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311248	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284787_35286900_35287028_35311098
ES.13656.23	chr16	-	1961	19	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	204.906211608032	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311249	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35310068_35310189_35310533_35310652_35311189
ES.13656.24	chr16	-	1797	17	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	137.923835412883	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311251	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.25	chr16	-	4115	15	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	230.029379223877	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGTAGAGTATGTT	NA	False	NA	-11	True	AATAAA	-13	NA	35311251	35217682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35230825_35231296_35231368_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284787_35286900_35287028_35311185
ES.13656.27	chr16	-	1932	18	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	178.713627218613	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTGGTAGAGTATGT	NA	False	NA	-12	True	AATAAA	-12	NA	35311248	35217683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35310068_35310189_35311098
ES.13656.28	chr16	-	3911	15	ISM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	34	4203	34	-3196	5prime_fragment	FALSE	canonical	3	428	junction_5	52.0469274123	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGAGGCAGCTCATGT	NA	False	NA	NA	False	AATAAA	-2	NA	35311209	35221884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.29	chr16	-	1153	8	NNC	ENSMUSG00000022844.9	novel	745	9	NA	NA	-37	11145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.129510531258	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCTGTACATCTAT	NA	False	NA	NA	False	NA	NA	NA	35311280	35262695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35263168_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.3	chr16	-	1850	18	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	179.330820699051	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTATGTTTTCACGAG	NA	False	NA	-3	True	AATAAA	-21	NA	35311248	35217674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35310068_35310189_35311189
ES.13656.30	chr16	-	1285	8	NNC	ENSMUSG00000022844.9	novel	745	9	NA	NA	-5	11143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.129510531258	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATGTCTGTACATCT	NA	False	NA	NA	False	NA	NA	NA	35311248	35262697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35263334_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.4	chr16	-	1661	16	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-5	3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	188.009172353077	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTAGAGTATGTTTTCA	NA	False	NA	-7	True	AATAAA	-17	NA	35311248	35217678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13656.5	chr16	-	5146	15	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-12	3	intron_retention	FALSE	canonical	3	6	junction_5	187.734778181283	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTAGAGTATGTTTTCA	NA	False	NA	-7	True	AATAAA	-17	NA	35311255	35217678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35228135_35230663_35230825_35231296_35231368_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ES.13656.6	chr16	-	1734	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_16	132.890697567587	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTAGAGTATGTTTTCA	NA	False	NA	-7	True	AATAAA	-17	NA	35311256	35217678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
ES.13656.9	chr16	-	1645	16	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	28	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	142.594156027985	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTAGAGTATGTTTT	NA	False	NA	-9	True	AATAAA	-15	NA	35311215	35217680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ES.13657.1	chr16	+	190	1	Intergenic	novelGene_11472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGATCTCAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35349796	35349986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35349800_35350000
ES.13658.1	chr16	+	4786	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-438	2	-12	-2	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTTGTGCATATGT	NA	False	NA	24	True	ATTAAA	-24	NA	35361502	35484629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.10	chr16	+	4666	22	NNC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	-47	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	10.6777153662278	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	35361684	35484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35479951_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.11	chr16	+	4680	21	FSM	ENSMUSG00000052133.17	ENSMUST00000120756.8	4646	21	-39	5	-39	-5	multi-exon	FALSE	canonical	3	22	junction_14	8.33591626637408	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTCTTTGTGCATA	NA	False	NA	21	True	ATTAAA	-21	NA	35361692	35484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.12	chr16	+	4962	21	NIC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	22	junction_13	8.33591626637408	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTCTTTGTGCATA	NA	False	NA	21	True	ATTAAA	-21	NA	35361704	35484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.13	chr16	+	3071	14	NNC	ENSMUSG00000052133.17	novel	4646	21	NA	NA	-84	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.2133158584941	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTCTTTGTGCATA	NA	False	NA	21	True	ATTAAA	-21	NA	35361856	35484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467704_35480841_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.14	chr16	+	1451	1	Intergenic	novelGene_11473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGCAGTAGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	35363466	35364917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35363500_35364900
ES.13658.15	chr16	+	4259	20	NNC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	-35487	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.4370389826218	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	35442977	35484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35443151_35448379_35448488_35465728_35465816_35466087_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.16	chr16	+	4101	20	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	86437	15	-30087	-15	3prime_fragment	FALSE	canonical	3	22	junction_12	8.43222942493812	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCCAAATGGAACTGTC	NA	False	NA	11	True	ATTAAA	-11	NA	35448377	35484616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.17	chr16	+	4017	18	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	103758	5	-12766	-5	3prime_fragment	FALSE	canonical	3	22	junction_10	8.70508740408749	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTCTTTGTGCATA	NA	False	NA	21	True	ATTAAA	-21	NA	35465698	35484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.18	chr16	+	2802	9	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	117723	8	-141	-8	3prime_fragment	FALSE	canonical	3	22	junction_1	10.821708506516	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	35479663	35484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.2	chr16	+	2675	3	ISM	ENSMUSG00000052133.17	ENSMUST00000133554.2	2928	6	-3	18121	-3	-18121	5prime_fragment	FALSE	canonical	3	26	junction_2	3.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAGTAAGTACTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	35361511	35450389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35361973_35442946_35443151_35448379
ES.13658.3	chr16	+	5258	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	-428	-480	-2	9	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGTGGTCACTGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	35361512	35485111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.4	chr16	+	4860	21	NIC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	7	-5	intron_retention	FALSE	canonical	3	22	junction_14	8.30421579681068	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGTCTTTGTGCATA	NA	False	NA	21	True	ATTAAA	-21	NA	35361521	35484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.5	chr16	+	5619	21	NIC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	9	0	intron_retention	FALSE	canonical	3	22	junction_13	8.33591626637408	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTCCAAATCAATGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	35361523	35485102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.7	chr16	+	5593	9	NIC	ENSMUSG00000052133.17	novel	4646	21	NA	NA	92	-3784	intron_retention	FALSE	canonical	3	26	junction_2	4.49826355386165	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGGTGATGTATTATTG	NA	False	NA	NA	False	NA	NA	NA	35361606	35475073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849
ES.13658.8	chr16	+	4814	23	NNC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	-59	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5363108971137	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	35361672	35484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35361973_35415310_35415515_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ES.13658.9	chr16	+	4964	24	NNC	ENSMUSG00000052133.17	novel	4350	22	NA	NA	-48	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.7482083383319	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAATGTGGTCACTGTG	NA	False	NA	NA	False	AATAAA	-26	NA	35361683	35485110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35361973_35415310_35415515_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486_35484481_35484806
ES.13659.1	chr16	-	2137	1	Intergenic	novelGene_11474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAAAGCCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	35381742	35379605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35379600_35381700
ES.1366.1	chr1	+	3569	2	Antisense	novelGene_ENSMUSG00000094410.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133571563	133576620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_133573587_133575074
ES.13660.1	chr16	-	352	1	Intergenic	novelGene_11475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAACAGATTCAAACCCA	NA	False	NA	NA	False	NA	NA	NA	35433067	35432715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35432700_35433100
ES.13661.1	chr16	+	3049	2	Antisense	novelGene_ENSMUSG00000087793.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCTCGAACTCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	35539282	35542732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_35540433_35540833
ES.13662.1	chr16	+	1222	1	Intergenic	novelGene_11476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGCGGTGATGGCAC	NA	False	NA	NA	False	NA	NA	NA	35579179	35580401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35579200_35580400
ES.13663.1	chr16	-	2743	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-173	2825	-173	661	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTCATTGCATGGCTCC	NA	False	NA	65	True	TATAAA	-33	NA	35589899	35517256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
ES.13663.2	chr16	-	2334	9	NNC	ENSMUSG00000022848.9	novel	5395	9	NA	NA	6988	641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.3223574575448	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAACAAAAA	NA	False	NA	45	True	TATAAA	-13	NA	35582712	35517276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35582470
ES.13663.3	chr16	-	2256	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	-168	3307	-168	179	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTTGGAAGCCTTTC	NA	False	NA	-1	True	AATAAA	-29	NA	35589894	35517738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
ES.13663.5	chr16	-	1919	8	NIC	ENSMUSG00000022848.9	novel	5395	9	NA	NA	-27	166	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	50.9817894658755	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTACTTTTAACCAGG	NA	False	NA	-14	True	AATAAA	-16	NA	35589753	35517751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35518391_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
ES.13664.1	chr16	+	2695	8	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	-19	952	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	207.731282464355	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATCGCTCAGTAGCCA	5385	False	NA	31	True	AATAAA	-25	NA	35590725	35646870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621885_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.10	chr16	+	4348	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	15	-454	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	252.174914493889	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATGTGTGAGAATGTT	5419	False	NA	NA	False	AATATA	-10	NA	35590759	35648393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35613251_35613437_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.11	chr16	+	1663	9	FSM	ENSMUSG00000022849.6	ENSMUST00000023555.6	4680	9	-17	3034	15	-105	multi-exon	FALSE	canonical	3	10	junction_4	251.189669373563	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5419	False	NA	2	True	AATATA	-8	NA	35590759	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.12	chr16	+	1654	7	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	16	-105	intron_retention	FALSE	canonical	1	1	junction_4	226.700793999492	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5420	False	NA	2	True	AATATA	-8	NA	35590760	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35637521_35637694_35639048_35639133_35645058
ES.13664.13	chr16	+	6044	6	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	16	-95	intron_retention	FALSE	canonical	3	531	junction_3	38.822673787363	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	5420	False	NA	12	True	AATATA	-18	NA	35590760	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35639133_35645058_35645170_35645252
ES.13664.14	chr16	+	2642	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	16	-955	16	955	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCGCTCAGTAGCCAAAC	5420	False	NA	34	True	AATAAA	-28	NA	35590760	35646873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.17	chr16	+	2828	1	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	16	-33211	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATAAAGGCTG	5420	False	NA	NA	False	NA	NA	NA	35590760	35593588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590800_35593600
ES.13664.18	chr16	+	5756	7	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	-13	-94	intron_retention	FALSE	canonical	3	17	junction_4	219.407092461074	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGTGTATATTTGCTTT	5423	False	NA	13	True	AATATA	-19	NA	35590763	35645824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35639133_35645058_35645170_35645252
ES.13664.19	chr16	+	3054	7	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	-12	16	intron_retention	FALSE	canonical	3	531	junction_3	37.5133309638054	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCCTTTGTCCCAAAT	5424	False	NA	NA	False	NA	NA	NA	35590764	35645934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35639133_35645058_35645170_35645252
ES.13664.2	chr16	+	1514	8	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	-16	-95	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	209.430422911325	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	5388	False	NA	12	True	AATATA	-18	NA	35590728	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590800_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.21	chr16	+	5707	7	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	1	940	intron_retention	FALSE	canonical	3	531	junction_3	36.0019289606667	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTTTCCAGCACATC	5437	False	NA	19	True	AATAAA	-13	NA	35590777	35646858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.22	chr16	+	1537	8	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	2	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.513397014901	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5438	False	NA	2	True	AATATA	-8	NA	35590778	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639106_35645058_35645170_35645252
ES.13664.23	chr16	+	4614	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	34	-2945	2	16	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATAGAAAGGAGGTGAT	5438	False	NA	NA	False	AATAAA	-40	NA	35590778	35648863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.24	chr16	+	2915	7	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	3	-97	intron_retention	FALSE	canonical	1	1	junction_4	225.293697204338	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACGTGTATATTTGC	5439	False	NA	10	True	AATATA	-16	NA	35590779	35645821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35637521_35639133_35645058_35645170_35645252
ES.13664.26	chr16	+	4670	7	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	37	-2921	5	-8	intron_retention	FALSE	canonical	3	531	junction_3	38.4610192272644	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAACTTTGCTTTAAT	5441	False	NA	NA	False	AATAAA	-37	NA	35590781	35648839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058
ES.13664.27	chr16	+	4372	8	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	5	-105	intron_retention	FALSE	canonical	3	17	junction_4	207.000246475255	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5441	False	NA	2	True	AATATA	-8	NA	35590781	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.28	chr16	+	1573	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	17	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	258.41088889596	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACGTGTATATTTGCT	5453	False	NA	11	True	AATATA	-17	NA	35590793	35645822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637575_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.29	chr16	+	2972	8	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	28	-95	intron_retention	FALSE	canonical	3	17	junction_4	259.213016176083	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	5464	False	NA	12	True	AATATA	-18	NA	35590804	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637521_35639133_35645058_35645170_35645252
ES.13664.3	chr16	+	1681	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	-14	-105	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	249.638457323787	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5390	False	NA	2	True	AATATA	-8	NA	35590730	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.30	chr16	+	3353	1	Intergenic	novelGene_11477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACACAGAAAACAAAATA	NA	False	NA	NA	False	TTTAAA	-23	NA	35612187	35615540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35612200_35615500
ES.13664.31	chr16	+	1261	6	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	31158	95	31126	-95	3prime_fragment	FALSE	canonical	3	531	junction_1	37.1181896110249	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	9521	False	NA	12	True	AATATA	-18	NA	35621902	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.32	chr16	+	5594	3	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	42172	-95	intron_retention	FALSE	canonical	3	615	junction_1	10.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	NA	False	NA	12	True	AATATA	-18	NA	35632948	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35637694_35639048_35639133_35645058
ES.13664.33	chr16	+	1069	6	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	43533	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	299.598798395454	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	NA	False	NA	2	True	AATATA	-8	NA	35634309	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35634425_35634699_35634780_35637575_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.34	chr16	+	947	5	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	43618	-105	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	266.660247318568	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	NA	False	NA	2	True	AATATA	-8	NA	35634394	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35634414_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.35	chr16	+	7350	1	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	47697	-95	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	NA	False	NA	12	True	AATATA	-18	NA	35638473	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35638500_35645800
ES.13664.36	chr16	+	3096	2	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	51890	105	51858	-105	3prime_fragment	FALSE	canonical	3	597	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	NA	False	NA	2	True	AATATA	-8	NA	35642634	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35645170_35645252
ES.13664.37	chr16	+	2902	2	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	53071	-882	53039	882	3prime_fragment	FALSE	canonical	3	597	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGTGAGTTTGTACATG	NA	False	NA	4	True	AATAAA	-13	NA	35643815	35646800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35645170_35645252
ES.13664.4	chr16	+	1614	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	-6	95	-6	-95	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACGTGTATATTTGCTT	5398	False	NA	12	True	AATATA	-18	NA	35590738	35645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.5	chr16	+	3619	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	14	-1930	14	-999	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACGTGTCTATACACCA	5418	False	NA	NA	False	NA	NA	NA	35590758	35647848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ES.13664.7	chr16	+	5761	7	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	14	-105	intron_retention	FALSE	canonical	3	10	junction_4	221.981981250731	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5418	False	NA	2	True	AATATA	-8	NA	35590758	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35634699_35639133_35645058_35645170_35645252
ES.13664.8	chr16	+	2939	7	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	14	-105	intron_retention	FALSE	canonical	3	531	junction_3	37.5133309638054	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATGATATACGTGT	5418	False	NA	2	True	AATATA	-8	NA	35590758	35645813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35639133_35645058_35645170_35645252
ES.13664.9	chr16	+	4071	8	NIC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	14	947	intron_retention	FALSE	canonical	3	10	junction_4	260.833749537822	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGCACATCGCTCAGT	5418	False	NA	26	True	AATAAA	-20	NA	35590758	35646865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35634699_35634780_35637521_35639133_35645058_35645170_35645252
ES.13665.1	chr16	-	2811	2	Antisense	novelGene_ENSMUSG00000022849.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35599408	35596162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35597535_35597969
ES.13666.1	chr16	-	3512	3	Antisense	novelGene_ENSMUSG00000022849.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAATAACAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	35621567	35612952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35613009_35617912_35618853_35619051
ES.13666.2	chr16	-	4565	1	Intergenic	novelGene_11478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAATAACAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	35617521	35612956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35613000_35617500
ES.13666.3	chr16	-	230	1	Intergenic	novelGene_11479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTCCCAACAA	NA	False	NA	NA	False	GGGGCT	-23	NA	35615431	35615201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35615200_35615400
ES.13666.4	chr16	-	179	1	Intergenic	novelGene_11480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAAACACTAGCTG	NA	False	NA	NA	False	NA	NA	NA	35619048	35618869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35618900_35619000
ES.13666.5	chr16	-	3074	1	Antisense	novelGene_ENSMUSG00000022849.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATTAAGGCAATAAGT	NA	False	NA	NA	False	NA	NA	NA	35622208	35619134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35619100_35622200
ES.13667.1	chr16	-	3042	1	Antisense	novelGene_ENSMUSG00000022849.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTCTATTTGTGGTG	1300	False	NA	NA	False	NA	NA	NA	35650968	35647926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35647900_35651000
ES.13667.2	chr16	-	161	1	Intergenic	novelGene_11481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	1766	False	NA	NA	False	NA	NA	NA	35650502	35650341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35650300_35650500
ES.13668.1	chr16	+	177	1	Intergenic	novelGene_11483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35676578	35676755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35676600_35676800
ES.13669.1	chr16	+	659	3	Intergenic	novelGene_11484	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGAATTTTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	35691986	35694348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35692328_35692675_35692771_35694125
ES.13669.2	chr16	+	602	3	Intergenic	novelGene_11485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCAGTGAATTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	35692096	35694346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35692328_35692675_35692814_35694113
ES.1367.1	chr1	-	4455	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	16	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTGATGCTATTGTTT	NA	False	NA	17	True	AATAAA	-37	NA	133589118	133547583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.10	chr1	-	4292	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	133.261846464708	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589118	133547599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575220_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.100	chr1	-	2923	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	-1453	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTGAGCATCTTT	NA	False	NA	0	True	GATAAA	-21	NA	133589118	133549061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ES.1367.101	chr1	-	3378	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	1	-1462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	154.141848122308	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTGAGCATCTTT	NA	False	NA	0	True	GATAAA	-21	NA	133589105	133549061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573577_133575073_133575268_133581710_133582177_133583082_133583137_133588974
ES.1367.103	chr1	-	4280	17	NIC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	-55	-1386	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCATTGTTGAGCATCT	NA	False	NA	-2	True	GATAAA	-19	NA	133589111	133549063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.104	chr1	-	2994	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-62	1464	0	-1464	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCATTGTTGAGCATCT	NA	False	NA	-2	True	GATAAA	-19	NA	133589118	133549063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ES.1367.105	chr1	-	2977	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	2	-1468	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_16	109.549628512681	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGCCATTGTTGAGC	NA	False	NA	-6	True	GATAAA	-15	NA	133589094	133549067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583071_133583137_133588974
ES.1367.106	chr1	-	2866	19	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-1633	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	145.085511184114	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589111	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133579515_133579564_133581710_133581771_133583082_133583137_133588974
ES.1367.107	chr1	-	2815	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-52	1633	-2	-1633	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589108	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ES.1367.108	chr1	-	7228	16	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	2685	1555	2685	-1555	intron_retention	FALSE	canonical	3	293	junction_13	50.7709453219938	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133586371	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.109	chr1	-	1669	1	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4069	-1633	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133550901	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549200_133550900
ES.1367.11	chr1	-	4479	19	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	139.582014919147	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589111	133547599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133585126_133585155_133588974
ES.1367.110	chr1	-	3158	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	-1624	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	105.649904608334	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589118	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588993
ES.1367.111	chr1	-	4108	17	NIC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	-52	-1555	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589108	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.112	chr1	-	2745	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	-1624	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589111	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ES.1367.113	chr1	-	4125	17	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	-1633	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589106	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.114	chr1	-	2799	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-1633	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589111	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.115	chr1	-	3221	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-9	-1633	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	116.945969839032	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589127	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588993
ES.1367.116	chr1	-	2761	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	-1624	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_9	127.575406622907	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACCAAAAACTGGACT	NA	False	NA	NA	False	NA	NA	NA	133589111	133549232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.118	chr1	-	3207	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	-1657	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	109.88493510003	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133589118	133549256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588974
ES.1367.119	chr1	-	10059	1	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	11	-31440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGAAGTACACTGTAG	NA	False	NA	NA	False	NA	NA	NA	133589107	133579048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133579000_133589100
ES.1367.120	chr1	-	8844	2	NNC	ENSMUSG00000102976.7	novel	879	2	NA	NA	0	3009	intron_retention	TRUE	non_canonical	0	0	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGAAGTACACTGTAG	NA	False	NA	NA	False	NA	NA	NA	133589118	133579048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133579427_133580652
ES.1367.13	chr1	-	4577	19	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	137.868921465908	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTATCATTATAACTC	NA	False	NA	0	True	AATAAA	-20	NA	133589105	133547600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588207_133588360_133588993
ES.1367.14	chr1	-	5786	17	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_1	121.516716956969	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTATCATTATAACTC	NA	False	NA	0	True	AATAAA	-20	NA	133589112	133547600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549582_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.15	chr1	-	4801	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	-13	6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	105.649904608334	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTCTTATCATTATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	133589131	133547602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588993
ES.1367.17	chr1	-	4432	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	-34	-3	-34	3	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589152	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.18	chr1	-	4437	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_16	116.634228477729	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589111	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583071_133583137_133588993
ES.1367.19	chr1	-	3809	13	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	156.087115099229	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589104	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568391_133588993
ES.1367.2	chr1	-	4482	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_9	133.087374062862	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTGATGCTATTGTTT	NA	False	NA	17	True	AATAAA	-37	NA	133589118	133547583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583071_133583137_133588974
ES.1367.20	chr1	-	5757	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	-12	3	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589130	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.21	chr1	-	5835	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-25	-6	intron_retention	FALSE	canonical	2	3	junction_17	132.104656005791	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589143	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588313_133588360_133588974
ES.1367.22	chr1	-	4859	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_16	114.156876216649	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589108	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583071_133583137_133588974
ES.1367.24	chr1	-	4821	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	155.310983932573	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589111	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133579515_133579564_133581710_133582177_133588998
ES.1367.25	chr1	-	5714	17	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	3	junction_4	119.096189459403	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589108	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552509_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.26	chr1	-	4875	19	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	145.474627629531	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589108	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588313_133588360_133588993
ES.1367.28	chr1	-	4470	18	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	152.367294350012	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589118	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133577860_133577952_133581710_133581771_133588993
ES.1367.3	chr1	-	4485	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-75	-14	-13	14	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGTGATGCTATTGT	NA	False	NA	15	True	AATAAA	-35	NA	133589131	133547585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ES.1367.30	chr1	-	4313	16	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	109.052077263826	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589112	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133588993
ES.1367.31	chr1	-	4292	16	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	136.783527273328	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589111	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.35	chr1	-	4887	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	109.88493510003	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589147	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588974
ES.1367.37	chr1	-	4804	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	103.726503363412	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589118	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133588974
ES.1367.38	chr1	-	4601	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	106.507903902715	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589112	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581980_133588974
ES.1367.4	chr1	-	11616	16	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	-56	-92	-56	92	intron_retention	FALSE	canonical	3	293	junction_13	50.7709453219938	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGTGATGCTATTGT	NA	False	NA	15	True	AATAAA	-35	NA	133589112	133547585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.40	chr1	-	4609	19	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	138.017007808619	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTAGTTCTTATCATTAT	NA	False	NA	-5	True	AATAAA	-15	NA	133589104	133547605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588313_133588504_133588993
ES.1367.43	chr1	-	7647	16	NNC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	3895	70	intron_retention	FALSE	canonical	0	0	junction_5	107.465012394215	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTAGTTCTTATCATT	NA	False	NA	-7	True	AATAAA	-13	NA	133585161	133547607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554500_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.44	chr1	-	4711	16	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6912	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	109.917463984978	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133582206	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566712_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.45	chr1	-	4634	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	570	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.563075017636	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133588449	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581953_133583071_133583137_133588313
ES.1367.49	chr1	-	4443	19	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	11	-9	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	136.952197211245	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589085	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588313_133588360_133588993
ES.1367.5	chr1	-	5898	17	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-114	14	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGTGATGCTATTGT	NA	False	NA	15	True	AATAAA	-35	NA	133589232	133547585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.51	chr1	-	4830	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	4	-9	combination_of_known_junctions	FALSE	canonical	3	41	junction_16	116.945969839032	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589112	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133582177_133583082_133583137_133588993
ES.1367.54	chr1	-	4422	18	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	134.049621551358	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589099	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588313_133588360_133588974
ES.1367.55	chr1	-	5602	15	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	127.229264378466	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.57	chr1	-	9374	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	924	0	intron_retention	FALSE	canonical	3	43	junction_16	97.39280966786	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133588194	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583071
ES.1367.59	chr1	-	4503	18	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	133.303229012098	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589112	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588226_133588360_133588993
ES.1367.6	chr1	-	4444	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	-45	23	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGTGATGCTATTGT	NA	False	NA	15	True	AATAAA	-35	NA	133589163	133547585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ES.1367.60	chr1	-	4565	19	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	139.186126383982	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589101	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588226_133588360_133588974
ES.1367.62	chr1	-	5715	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_13	119.593827573792	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589111	133547608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568435_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.63	chr1	-	5834	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	-1	intron_retention	FALSE	canonical	1	8	junction_3	125.376417614119	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTAGTTCTTATCA	NA	False	NA	-9	True	AATAAA	-11	NA	133589111	133547609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552120_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.64	chr1	-	4296	16	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.685906216402	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTAGTTCTTATCA	NA	False	NA	-9	True	AATAAA	-11	NA	133589112	133547609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588998
ES.1367.73	chr1	-	4391	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	150.775733456375	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133589103	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573566_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.75	chr1	-	9186	16	NNC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	2346	67	intron_retention	FALSE	canonical	2	6	junction_8	108.046162973672	700	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133586710	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563792_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.76	chr1	-	4446	19	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	8	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	149.431969739567	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133589088	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133579515_133579564_133581710_133581771_133583082_133583137_133588993
ES.1367.80	chr1	-	5491	16	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6133	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.534692626989	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133582985	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565225_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.82	chr1	-	5536	16	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	8253	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	136.442157056469	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133580865	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133579515
ES.1367.83	chr1	-	5772	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_9	147.03155220479	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTAGTTCTTATC	NA	False	NA	-10	True	AATAAA	-10	NA	133589112	133547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565225_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573577_133575073_133575268_133581710_133583137_133588974
ES.1367.86	chr1	-	4322	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-5	-110	combination_of_known_junctions	FALSE	canonical	3	78	junction_17	104.361959952471	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGTATTAGTCAATGA	NA	False	NA	-109	True	AAAAAG	-17	NA	133589111	133547709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.87	chr1	-	4327	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-41	110	0	-110	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGTATTAGTCAATGA	NA	False	NA	-109	True	AAAAAG	-17	NA	133589097	133547709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ES.1367.88	chr1	-	5632	17	NIC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	-55	-34	intron_retention	FALSE	canonical	3	78	junction_16	90.1805264109165	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCCTGTATTAGTCAAT	NA	False	NA	-111	True	AAAAAG	-15	NA	133589111	133547711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588993
ES.1367.89	chr1	-	7201	16	NNC	ENSMUSG00000094410.9	novel	10156	17	NA	NA	4230	-34	intron_retention	FALSE	canonical	3	34	junction_9	101.977426696086	700	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCCTGTATTAGTCAAT	NA	False	NA	-111	True	AAAAAG	-15	NA	133584826	133547711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.9	chr1	-	4428	17	NNC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	132.355330809718	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTATAACTCAAGTGAT	NA	False	NA	7	True	AATAAA	-27	NA	133589118	133547593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568492_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.90	chr1	-	4281	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	10	104	10	-104	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCCTGTATTAGTCAA	NA	False	NA	-112	True	AAAAAG	-14	NA	133589108	133547712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.91	chr1	-	5648	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	-106	intron_retention	FALSE	canonical	3	133	junction_16	79.3516697996961	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCCCTGTATTAGTC	NA	False	NA	-114	True	AAAAAG	-12	NA	133589111	133547714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ES.1367.92	chr1	-	4449	18	NIC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	453	-118	combination_of_known_junctions	FALSE	canonical	3	13	junction_17	115.133441460596	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAATGCCCTGTATTA	NA	False	NA	-117	True	AAAAAG	-9	NA	133588566	133547717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588313
ES.1367.93	chr1	-	3202	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	9	1184	9	-1184	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAATTCGTCTAAGCT	NA	False	NA	NA	False	ACTAAA	-42	NA	133589109	133548792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.1367.94	chr1	-	4597	16	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	5742	1129	5742	-1129	intron_retention	FALSE	canonical	3	293	junction_13	50.7709453219938	677	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGTCTTGTATTTGGA	NA	False	NA	NA	False	ACTAAA	-28	NA	133583314	133548806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.95	chr1	-	3158	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	7	-1211	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTGTTAAATTGTATG	NA	False	NA	NA	False	ACTAAA	-15	NA	133589111	133548819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
ES.1367.96	chr1	-	3236	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	-62	1222	0	-1222	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTGTGTTAAATTGTA	NA	False	NA	NA	False	ACTAAA	-13	NA	133589118	133548821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ES.1367.97	chr1	-	6084	16	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	4089	1295	4089	-1295	intron_retention	FALSE	canonical	3	293	junction_13	50.7709453219938	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTCCTCGAGGTGT	NA	False	NA	89	True	AATGAA	-15	NA	133584967	133548972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710
ES.1367.98	chr1	-	3044	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	-3	-1375	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_9	129.095388675052	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTGGTCCTCGAGGT	NA	False	NA	87	True	AATGAA	-13	NA	133589101	133548974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588993
ES.1367.99	chr1	-	3027	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	0	1368	0	-1368	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCAGTGGTCCTCGAG	NA	False	NA	85	True	AATGAA	-11	NA	133589118	133548976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ES.13670.1	chr16	-	9757	16	Fusion	ENSMUSG00000116549.2_ENSMUSG00000034422.15	novel	7417	17	NA	NA	-36	134	intron_retention	FALSE	canonical	1	2	junction_14	4.42216638714053	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGAAGAGTTGTCACCC	NA	False	NA	NA	False	AATAAA	-15	NA	35691950	35652265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_35655306_35656360_35656536_35659631_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488_35685523_35686518_35686659_35691536
ES.13670.3	chr16	-	7924	15	NNC	ENSMUSG00000034422.15	novel	7417	17	NA	NA	6228	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.84662727248211	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTGGTGGAATTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	35685524	35653243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35655306_35656360_35656536_35659631_35660789_35661091_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488
ES.13670.4	chr16	-	7433	17	FSM	ENSMUSG00000034422.15	ENSMUST00000042665.9	7417	17	-22	6	-22	-6	multi-exon	FALSE	canonical	1	2	junction_15	4.31883592533914	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTCTCTTGGTGGA	NA	False	NA	NA	False	AGTAAA	-44	NA	35691936	35653249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35655306_35656360_35656536_35659631_35659766_35661091_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488_35685523_35686518_35686659_35691536
ES.13670.5	chr16	-	7586	16	NIC	ENSMUSG00000034422.15	novel	7417	17	NA	NA	-88	-6	intron_retention	FALSE	canonical	1	2	junction_14	4.39696865275764	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTCTCTTGGTGGA	NA	False	NA	NA	False	AGTAAA	-44	NA	35692002	35653249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35655306_35656360_35656536_35659631_35659766_35661091_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488_35685523_35686518_35686659_35691536
ES.13670.7	chr16	-	178	1	Intergenic	novelGene_11482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACATAGAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	35666784	35666606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35666600_35666800
ES.13671.1	chr16	-	349	1	Intergenic	novelGene_11486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAATAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	35740736	35740387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35740400_35740700
ES.13671.2	chr16	-	187	1	Intergenic	novelGene_11487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAAAAAACATT	NA	False	NA	NA	False	NA	NA	NA	35740734	35740547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35740500_35740700
ES.13672.1	chr16	+	3568	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	-20	0	-20	0	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	NA	False	NA	13	True	AATAAA	-19	NA	35758819	35792975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ES.13672.10	chr16	+	154	1	Intergenic	novelGene_11490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAATATAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	35796580	35796734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35796600_35796700
ES.13672.11	chr16	+	3961	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-36	1114	-36	886	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	10	True	AGTAAA	-21	NA	35803648	35856387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.12	chr16	+	2729	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-34	2344	-34	-344	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCGGTGTGACGAGAGG	NA	False	NA	NA	False	ATTAAA	-31	NA	35803650	35855157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.13	chr16	+	5232	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-23	-170	-23	170	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGGGGATTGTTTCTTTT	NA	False	NA	NA	False	AAAAAG	-13	NA	35803661	35857671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.14	chr16	+	4958	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-16	97	-16	-97	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTACATGACTACC	NA	False	NA	-71	True	AAGAAA	-30	NA	35803668	35857404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.15	chr16	+	1927	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-7	3119	-7	104	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTTTGCGCTCATTT	NA	False	NA	NA	False	NA	NA	NA	35803677	35854382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.16	chr16	+	6511	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-5	-1467	-5	1467	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGGTAGTAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	35803679	35858968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.17	chr16	+	2189	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-4	2854	-4	369	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAAACTAAAACCTT	NA	False	NA	NA	False	AAAAAG	-42	NA	35803680	35854647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.18	chr16	+	4074	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-4	969	-4	-969	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGTTGTCACCTCAC	NA	False	NA	NA	False	TATAAA	-29	NA	35803680	35856532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.19	chr16	+	7525	13	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-1	886	intron_retention	FALSE	canonical	2	6	junction_5	173.143064641161	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	10	True	AGTAAA	-21	NA	35803683	35856387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35853801_35854090
ES.13672.2	chr16	+	3663	11	NIC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	11.3859562619922	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGCTGTGAATCGTGA	NA	False	NA	10	True	AATAAA	-16	NA	35758829	35792972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35759431_35761402_35761506_35763738_35763881_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ES.13672.20	chr16	+	7032	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	-1	-1992	-1	1992	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGAATGATTTTTTGTC	NA	False	NA	NA	False	AATACA	-31	NA	35803683	35859493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.24	chr16	+	5502	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	6	-469	-4	469	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATCACATTGCTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	35803690	35857970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.26	chr16	+	6677	14	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	2	5	intron_retention	FALSE	canonical	2	6	junction_5	166.400102412349	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTCCTTGGGTTATG	NA	False	NA	31	True	AATAAA	-44	NA	35803696	35857506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35851668_35853621_35853801_35854090
ES.13672.27	chr16	+	5405	14	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	4	371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	129.483498297509	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGATATTCTATATT	NA	False	NA	NA	False	AATATA	-14	NA	35803698	35857872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833253_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.29	chr16	+	3663	12	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	7	883	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	132.018218126724	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTCTTGTGGCTGAT	NA	False	NA	7	True	AGTAAA	-18	NA	35803701	35856384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.3	chr16	+	3720	12	NIC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	13.4465578255319	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGCTGTGAATCGTGA	NA	False	NA	10	True	AATAAA	-16	NA	35758848	35792972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35759431_35761402_35761506_35763738_35763773_35766138_35766323_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ES.13672.30	chr16	+	3919	13	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	12	603	intron_retention	FALSE	canonical	3	400	junction_10	41.5702217137861	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGCCTTCAGTGAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	35803706	35854881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35851668_35853621_35853801_35854090
ES.13672.31	chr16	+	4870	14	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	13	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.069725663458	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCAAACGTGGGGCTG	NA	False	NA	1	True	AATAAA	-14	NA	35803707	35857476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803758_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.32	chr16	+	4806	14	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-12	885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	130.33883925274	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCTTGTGGCTGATTT	NA	False	NA	9	True	AGTAAA	-20	NA	35803711	35856386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35848982_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.34	chr16	+	5866	12	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-12	885	intron_retention	FALSE	canonical	3	400	junction_8	43.7572190029946	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCTTGTGGCTGATTT	NA	False	NA	9	True	AGTAAA	-20	NA	35803711	35856386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35841158_35841854_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.35	chr16	+	3773	14	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-8	886	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.069725663458	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	10	True	AGTAAA	-21	NA	35803715	35856387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803758_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.36	chr16	+	4968	15	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	125.862574878723	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTCCTTGGGTTATG	NA	False	NA	31	True	AATAAA	-44	NA	35803715	35857506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090_35857029_35857073
ES.13672.37	chr16	+	5501	15	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-7	371	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	163.253402627289	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGATATTCTATATT	NA	False	NA	NA	False	AATATA	-14	NA	35803716	35857872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.38	chr16	+	5115	15	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	-7	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	163.253402627289	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGGCTGTATTGTAAAA	NA	False	NA	11	True	AATAAA	-24	NA	35803716	35857486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.39	chr16	+	5132	15	NIC	ENSMUSG00000022905.13	novel	1740	14	NA	NA	-6	-149	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	187.496843510846	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTGACTATGCCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	35803717	35857352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35804031_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.4	chr16	+	3250	10	NNC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	14	104414	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	12.7801930084539	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35758853	35897389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35792204_35792972_35897357
ES.13672.40	chr16	+	5067	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	35	-63	-4	63	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATCAGTAAGCAAGCCA	NA	False	NA	89	True	ATTAAA	-15	NA	35803719	35857564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.41	chr16	+	4288	14	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	8	883	intron_retention	FALSE	canonical	2	6	junction_5	169.070588528358	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTCTTGTGGCTGAT	NA	False	NA	7	True	AGTAAA	-18	NA	35803731	35856384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621
ES.13672.42	chr16	+	5129	14	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	8	-15	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	124.529647618929	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGGCTGTATTGTAAAA	NA	False	NA	11	True	AATAAA	-24	NA	35803731	35857486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35804031_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.43	chr16	+	7143	16	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	9	1987	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	187.211419404788	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGCTTGAATGATTTT	NA	False	NA	NA	False	AATACA	-26	NA	35803732	35859488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35834230_35834273_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.44	chr16	+	3717	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	48	1274	9	726	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTACAAGACTGATTC	NA	False	NA	NA	False	NA	NA	NA	35803732	35856227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.46	chr16	+	4854	13	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	12	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	192.315477940689	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGGCTGTATTGTAAAA	NA	False	NA	11	True	AATAAA	-24	NA	35803735	35857486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35803879_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.47	chr16	+	2783	14	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	14	-355	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	124.529647618929	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTTTGTTTAAACCGGT	NA	False	NA	NA	False	ATTAAA	-20	NA	35803737	35855146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35804031_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.49	chr16	+	2349	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	62	2628	23	595	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTCACCTTCAGCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	35803746	35854873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.51	chr16	+	4948	14	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	63	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	125.998262409358	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTTTTCCTTGGGTTAT	NA	False	NA	30	True	AATAAA	-43	NA	35803786	35857505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829678_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.52	chr16	+	3817	14	NNC	ENSMUSG00000022905.13	novel	1740	14	NA	NA	-13	884	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_6	165.76450109262	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCTTGTGGCTGATT	NA	False	NA	8	True	AGTAAA	-19	NA	35803938	35856385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35804031_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840529_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.54	chr16	+	3951	14	NNC	ENSMUSG00000022905.13	novel	1740	14	NA	NA	120	885	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	127.806714272051	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCTTGTGGCTGATTT	NA	False	NA	9	True	AGTAAA	-20	NA	35804071	35856386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35804293_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.55	chr16	+	5008	14	NNC	ENSMUSG00000022905.13	novel	1740	14	NA	NA	183	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	127.806714272051	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTCCTTGGGTTATG	NA	False	NA	31	True	AATAAA	-44	NA	35804134	35857506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35804293_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.56	chr16	+	3162	1	Intergenic	novelGene_11491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	5168	False	NA	NA	False	NA	NA	NA	35814244	35817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35814200_35817400
ES.13672.57	chr16	+	4821	13	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	16866	25	-6	-25	3prime_fragment	FALSE	canonical	3	400	junction_9	42.5626172701925	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCAAACGTGGGGCTG	NA	False	NA	1	True	AATAAA	-14	NA	35820550	35857476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13672.58	chr16	+	7070	4	NNC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	5090	878	intron_retention	FALSE	canonical	0	0	junction_1	225.190783312481	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGACTTTTCTTGTGG	NA	False	NA	2	True	AGTAAA	-13	NA	35847103	35856379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35848735_35849128_35850018_35851539_35853801_35854090
ES.13672.59	chr16	+	4906	2	ISM	ENSMUSG00000022905.13	ENSMUST00000173641.2	690	6	12541	-3248	10277	-15	3prime_fragment	FALSE	canonical	3	437	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGGCTGTATTGTAAAA	NA	False	NA	11	True	AATAAA	-24	NA	35852290	35857486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35853801_35854090
ES.13672.6	chr16	+	3367	12	NNC	ENSMUSG00000022906.16	novel	3548	11	NA	NA	-141	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.6114924704357	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTGTGAATCGTGAAT	NA	False	NA	12	True	AATAAA	-18	NA	35759239	35792974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35772931_35773152_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ES.13672.60	chr16	+	3412	1	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	12076	0	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACAGGTTTTCCTTGGG	NA	False	NA	26	True	AATAAA	-39	NA	35854089	35857501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35854100_35857500
ES.13672.61	chr16	+	2475	1	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	50558	784	12229	-784	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGGCATTCAGCTAAA	NA	False	NA	NA	False	AGTAAA	-17	NA	35854242	35856717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35854200_35856700
ES.13672.62	chr16	+	1744	1	FSM	ENSMUSG00000034379.10	ENSMUST00000042203.10	2739	1	40	955	40	-955	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATGATAAACTATCCAA	4418	False	NA	NA	False	AATAAA	-20	NA	35861599	35863343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35861600_35863300
ES.13672.63	chr16	+	176	1	Intergenic	novelGene_11494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4701	False	NA	NA	False	NA	NA	NA	35876324	35876500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35876300_35876500
ES.13672.64	chr16	+	1138	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	-66	1	-66	-1	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTATTTGGTGACTT	NA	False	NA	24	True	ATTAAA	-21	NA	35891988	35912489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ES.13672.65	chr16	+	1164	6	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-51	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	442.653092161345	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTGTGTACATATTTA	NA	False	NA	13	True	ATTAAA	-10	NA	35892003	35912478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35902499_35902552_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ES.13672.66	chr16	+	5835	4	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-25	0	intron_retention	FALSE	canonical	3	859	junction_1	29.9332590941915	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35892029	35912490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35892508_35903060_35903187_35905386_35910331_35912203
ES.13672.67	chr16	+	4649	6	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	448.164880373284	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892045	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35893445_35893584_35903060_35903187_35905386_35908973_35910270_35910331_35912203
ES.13672.68	chr16	+	938	4	FSM	ENSMUSG00000075229.12	ENSMUST00000163352.9	391	4	-396	-151	-1	-1	multi-exon	FALSE	canonical	3	31	junction_1	405.618320866085	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892053	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_35892508_35905386_35905534_35910270_35910331_35912203
ES.13672.69	chr16	+	1147	1	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-6	-12122	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAATCAAA	NA	False	NA	NA	False	AATGAA	-11	NA	35892443	35893590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35892400_35893600
ES.13672.7	chr16	+	1952	6	ISM	ENSMUSG00000022906.16	ENSMUST00000114877.8	2608	9	8855	-4	-417	4	3prime_fragment	FALSE	canonical	3	21	junction_2	7.31026675299883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGTCCCAACAAGGCAA	NA	False	NA	NA	False	AATAAA	-15	NA	35768236	35788600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019
ES.13672.70	chr16	+	2292	3	NNC	ENSMUSG00000075229.12	novel	506	3	NA	NA	-3	-3640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATTAAGGTCAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	35892446	35902072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35894417_35897328_35897592_35902013
ES.13672.71	chr16	+	861	7	NNC	ENSMUSG00000075229.12	novel	740	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.95820849081	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892449	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35901632_35901774_35902499_35902552_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ES.13672.72	chr16	+	3315	5	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	1	21963	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.6188898546203	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATACTCTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	35892450	35934453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35910270_35910331_35923991_35924148_35931361_35932777_35932826
ES.13672.73	chr16	+	805	6	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	440.700533242246	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892450	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35893445_35893584_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ES.13672.74	chr16	+	808	6	NNC	ENSMUSG00000075229.12	novel	740	5	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	441.187307161029	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTACATATTTATTTG	NA	False	NA	17	True	ATTAAA	-14	NA	35892452	35912482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35901632_35901774_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ES.13672.75	chr16	+	4520	5	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	390.140599656073	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892453	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35903060_35903187_35905386_35905534_35906414_35910331_35912203
ES.13672.76	chr16	+	4187	5	NNC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	390.140599656073	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	False	NA	15	True	ATTAAA	-12	NA	35892453	35912480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35892508_35903060_35903187_35905386_35907706_35908919_35910331_35912203
ES.13672.77	chr16	+	4919	2	NNC	ENSMUSG00000075229.12	novel	506	3	NA	NA	10	-3640	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATTAAGGTCAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	35892463	35902072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35897300_35901989
ES.13672.78	chr16	+	1403	1	Intergenic	novelGene_11495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTACTATATTGCAGGT	NA	False	NA	NA	False	NA	NA	NA	35899802	35901205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35899800_35901200
ES.13672.79	chr16	+	6392	1	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-3484	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35906089	35912481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_35906100_35912500
ES.13672.8	chr16	+	179	1	Intergenic	novelGene_11488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAAGACTAT	300	False	NA	NA	False	NA	NA	NA	35770712	35770891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_35770700_35770900
ES.13672.9	chr16	+	5075	14	NNC	ENSMUSG00000022905.13	novel	1740	14	NA	NA	-4435	70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.069725663458	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGCAAGCCATTTTAGC	NA	False	NA	96	True	ATTAAA	-22	NA	35794684	35857571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_35794845_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ES.13673.1	chr16	-	5318	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	-11	2	-11	-2	multi-exon	FALSE	canonical	3	12	junction_3	7.25861557047899	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTGGTTTCCCTCAT	9983	False	NA	4	True	AATAAA	-22	NA	35759532	35746882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
ES.13673.2	chr16	-	2563	3	FSM	ENSMUSG00000049502.18	ENSMUST00000114885.3	2649	3	85	1	85	-1	multi-exon	FALSE	canonical	3	12	junction_1	10	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCCTCATGTCTTTTT	9936	False	NA	NA	False	NA	NA	NA	35759436	35752230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35754170_35756746_35756998_35759063
ES.13674.1	chr16	-	181	1	Intergenic	novelGene_11489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATATATTATTATTAAT	262	False	NA	NA	False	NA	NA	NA	35771110	35770929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35770900_35771100
ES.13675.1	chr16	-	148	1	Intergenic	novelGene_11492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCTG	NA	False	NA	NA	False	NA	NA	NA	35819088	35818940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35818900_35819100
ES.13676.1	chr16	-	186	1	Intergenic	novelGene_11493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATTACAGGTAAACTT	NA	False	NA	0	True	NA	NA	NA	35819393	35819207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35819200_35819400
ES.13677.1	chr16	-	6926	2	Antisense	novelGene_ENSMUSG00000022905.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	4331	False	NA	NA	False	NA	NA	NA	35856160	35848944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_35853800_35854089
ES.13678.1	chr16	-	3607	2	ISM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	21634	-4	2659	4	3prime_fragment	FALSE	canonical	3	971	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTGTTTTGTTGCTT	2486	False	NA	-1	True	AATACA	-18	NA	35870105	35864211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_35864462_35866748
ES.13678.2	chr16	-	568	4	NIC	ENSMUSG00000003955.9	novel	718	5	NA	NA	37	2	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	492.628550622971	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTCTTTGTTTTGTTGC	NA	False	NA	-3	True	AATACA	-16	NA	35891927	35864213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35864462_35870211_35870321_35872655_35872779_35891839
ES.13678.3	chr16	-	6318	3	NIC	ENSMUSG00000003955.9	novel	718	5	NA	NA	37	2	intron_retention	FALSE	canonical	3	1046	junction_2	4	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTCTTTGTTTTGTTGC	NA	False	NA	-3	True	AATACA	-16	NA	35891927	35864213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35870321_35872655_35872779_35891839
ES.13678.4	chr16	-	893	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-258	83	-179	2	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTCTTTGTTTTGTTGC	NA	False	NA	-3	True	AATACA	-16	NA	35892143	35864213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ES.13678.5	chr16	-	2090	5	NNC	ENSMUSG00000003955.9	novel	718	5	NA	NA	-24	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	444.441433149521	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGACTTGTCTTTGT	NA	False	NA	-11	True	AATACA	-8	NA	35891909	35864221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_35864462_35866748_35867824_35869738_35870321_35872655_35872779_35891839
ES.13678.6	chr16	-	2895	4	ISM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	16647	6	-2328	-5	3prime_fragment	FALSE	canonical	3	971	junction_1	46.8069320602076	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGACTTGTCTTTGT	NA	False	NA	-11	True	AATACA	-8	NA	35875092	35864221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655
ES.13678.7	chr16	-	1560	4	ISM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-42	1487	37	1170	5prime_fragment	FALSE	canonical	3	1046	junction_3	14.9740516301441	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	35891927	35865617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_35866858_35870211_35870321_35872655_35872779_35891839
ES.13678.8	chr16	-	3836	1	NIC	ENSMUSG00000003955.9	novel	318	3	NA	NA	37	-21304	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCTGTAGCATTA	NA	False	NA	NA	False	NA	NA	NA	35891927	35888091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_35888100_35891900
ES.13678.9	chr16	-	2494	1	Genic_Genomic	ENSMUSG00000003955.9	novel	NA	NA	NA	NA	-17	-22700	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTGTATCTTTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	35891981	35889487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_35889500_35892000
ES.13679.1	chr16	-	188	1	Intergenic	novelGene_11496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTATTGTTCTATCCAG	6870	False	NA	NA	False	NA	NA	NA	35925902	35925714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_35925700_35925900
ES.1368.1	chr1	+	1647	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATTG	NA	False	NA	NA	False	NA	NA	NA	133592191	133593838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133592200_133593800
ES.1368.2	chr1	+	5143	2	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTAATAGTCTC	NA	False	NA	NA	False	NA	NA	NA	133592192	133604890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133593410_133600964
ES.1368.3	chr1	+	183	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTGTATTAATAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	133595750	133595933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133595800_133595900
ES.1368.4	chr1	+	2794	2	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATAGTCTCTGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	133597965	133604898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133599258_133603396
ES.13680.1	chr16	-	6379	4	ISM	ENSMUSG00000051980.14	ENSMUST00000063597.14	4534	7	51906	-3110	51378	3110	3prime_fragment	FALSE	canonical	1	1	junction_3	4.54606056566195	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGAGTTTGTGGTCC	3748	False	NA	NA	False	NA	NA	NA	36330590	36310947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955
ES.13680.2	chr16	-	4228	4	NNC	ENSMUSG00000051980.14	novel	4534	7	NA	NA	59114	1468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.98887651569859	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACACAACTGCAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	36322854	36312589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_36316337_36317951_36318076_36320538_36320770_36322728
ES.13680.3	chr16	-	4550	7	NNC	ENSMUSG00000051980.14	novel	4534	7	NA	NA	29407	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.90156663690654	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCAGTATTATTGAGTT	6942	False	NA	NA	False	TATAAA	-28	NA	36352561	36314050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955_36330841_36335815_36336123_36337963_36338391_36352271
ES.13680.5	chr16	-	3155	1	Intergenic	novelGene_11497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTCTGATCCACA	6071	False	NA	NA	False	NA	NA	NA	36328267	36325112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_36325100_36328300
ES.13681.1	chr16	-	3460	1	Genic_Genomic	ENSMUSG00000051980.14	novel	NA	NA	NA	NA	-2568	-43412	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTGTGTCTTGTGCCT	NA	False	NA	NA	False	AGTAAA	-9	NA	36385071	36381611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_36381600_36385100
ES.13682.1	chr16	+	2649	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	-91	484	-91	-421	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36514248	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.10	chr16	+	3065	4	ISM	ENSMUSG00000022900.15	ENSMUST00000153802.2	1922	5	14082	-1190	-7423	1190	3prime_fragment	FALSE	canonical	3	311	junction_1	1.24721912892465	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTGGGTGATC	NA	False	NA	NA	False	NA	NA	NA	36528476	36538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468
ES.13682.11	chr16	+	2731	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14179	3	-7321	-3	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAAATTCCTGTGTTT	NA	False	NA	3	True	ATTAAA	-15	NA	36528578	36547100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.12	chr16	+	2313	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14179	421	-7321	-421	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36528578	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.13	chr16	+	2322	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7312	-425	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCTACTTCTATT	NA	False	NA	21	True	AATAAA	-17	NA	36528587	36546678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.14	chr16	+	2430	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7301	-427	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	110.150528318701	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTTTCTACTTCTA	NA	False	NA	19	True	AATAAA	-15	NA	36528598	36546676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541797_36542032_36542244_36543042_36545878
ES.13682.15	chr16	+	3429	3	ISM	ENSMUSG00000022900.15	ENSMUST00000153802.2	1922	5	14204	-1190	-7301	1190	intron_retention	FALSE	canonical	3	311	junction_1	0.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTGGGTGATC	NA	False	NA	NA	False	NA	NA	NA	36528598	36538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862
ES.13682.16	chr16	+	2686	7	NIC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-7286	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	129.937698746575	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36528613	36547109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.17	chr16	+	2694	7	NNC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-7284	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	141.475164683496	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTGTGTTTGGCAGA	NA	False	NA	9	True	ATTAAA	-21	NA	36528615	36547106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529840_36529991_36535862_36535983_36536474_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.18	chr16	+	2697	6	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14217	2877	-7283	1604	internal_fragment	FALSE	canonical	3	275	junction_4	14.6287388383278	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACTGAATTGCATTAA	NA	False	NA	NA	False	TTTAAA	-39	NA	36528616	36544226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244
ES.13682.19	chr16	+	2056	5	NIC	ENSMUSG00000022900.15	novel	2850	7	NA	NA	-7281	-427	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	145.226331978743	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTTTCTACTTCTA	NA	False	NA	19	True	AATAAA	-15	NA	36528618	36546676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36536468_36536616_36542244_36543042_36545878
ES.13682.2	chr16	+	3052	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	-10	0	-10	0	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	NA	False	NA	69	True	NA	NA	NA	36514329	36547166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.20	chr16	+	2895	4	NIC	ENSMUSG00000022900.15	novel	1922	5	NA	NA	-7272	1190	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	121.858752478251	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTGGGTGATC	NA	False	NA	NA	False	NA	NA	NA	36528627	36538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468
ES.13682.21	chr16	+	5983	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14290	-3196	-7270	3196	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTCATCCAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	36528629	36550362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.22	chr16	+	5134	6	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14232	425	-7268	-425	intron_retention	FALSE	canonical	3	275	junction_4	14.6287388383278	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCTACTTCTATT	NA	False	NA	21	True	AATAAA	-17	NA	36528631	36546678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244
ES.13682.23	chr16	+	2318	7	NNC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-7265	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	145.637010711182	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTTTCTACTTCTA	NA	False	NA	19	True	AATAAA	-15	NA	36528634	36546676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536683_36541899_36542032_36542244_36543001_36545878
ES.13682.24	chr16	+	2713	7	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7264	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	109.675278283972	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTGTGTTTGGCAGA	NA	False	NA	9	True	ATTAAA	-21	NA	36528635	36547106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529848_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.25	chr16	+	2247	7	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7258	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	129.937698746575	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTGTGTTTGGCAGA	NA	False	NA	9	True	ATTAAA	-21	NA	36528641	36547106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36542600_36545885
ES.13682.26	chr16	+	1612	7	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14257	1044	-7243	-1044	3prime_fragment	FALSE	canonical	0	0	junction_6	113.338235188111	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGGTGTTTGTGGAAT	NA	False	NA	NA	False	AATAGA	-10	NA	36528656	36546059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.27	chr16	+	5529	6	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	14259	3	-7241	-3	intron_retention	FALSE	canonical	3	275	junction_4	14.6287388383278	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAAATTCCTGTGTTT	NA	False	NA	3	True	ATTAAA	-15	NA	36528658	36547100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244
ES.13682.28	chr16	+	2562	6	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7231	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	116.63001328989	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAAATTCCTGTGTTT	NA	False	NA	3	True	ATTAAA	-15	NA	36528668	36547100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.29	chr16	+	2256	7	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7231	-421	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	109.675278283972	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36528668	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529848_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.3	chr16	+	2530	8	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	6	-421	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	118.580550423649	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36514348	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.30	chr16	+	2347	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7231	-421	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	127.905781295799	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36528668	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541797_36542032_36542244_36543042_36545878
ES.13682.31	chr16	+	5915	7	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7211	3195	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	109.675278283972	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCATCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	36528688	36550361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529848_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.32	chr16	+	1617	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14351	1109	-7209	-1046	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACAGGTGTTTGTGGA	NA	False	NA	NA	False	AATAGA	-8	NA	36528690	36546057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.33	chr16	+	2699	3	NIC	ENSMUSG00000022900.15	novel	1922	5	NA	NA	-7177	1190	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	155	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTGGGTGATC	NA	False	NA	NA	False	NA	NA	NA	36528722	36538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36536468
ES.13682.34	chr16	+	2185	7	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7167	-422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	112.259743452406	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTACTTCTATTCAT	NA	False	NA	24	True	AATAAA	-20	NA	36528732	36546681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542258_36543042_36545878
ES.13682.35	chr16	+	2193	7	NNC	ENSMUSG00000022900.15	novel	823	4	NA	NA	-6867	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.873672289431	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTTTCTACTTCTA	NA	False	NA	19	True	AATAAA	-15	NA	36529032	36546676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36529123_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.36	chr16	+	2722	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15352	61	-6208	2	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCCTGTGTTTGGCAG	NA	False	NA	8	True	ATTAAA	-20	NA	36529691	36547105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.37	chr16	+	8114	5	NIC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-6196	-425	intron_retention	FALSE	canonical	0	0	junction_4	128.77572558522	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCTACTTCTATT	NA	False	NA	21	True	AATAAA	-17	NA	36529703	36546678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.38	chr16	+	2280	6	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	15367	488	-6193	-425	3prime_fragment	FALSE	canonical	3	275	junction_3	16.2061716639063	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCTACTTCTATT	NA	False	NA	21	True	AATAAA	-17	NA	36529706	36546678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.39	chr16	+	2108	6	NIC	ENSMUSG00000022900.15	novel	2878	8	NA	NA	-6084	-428	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	133.126406095861	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGAGTTTCTACTTCT	NA	False	NA	18	True	AATAAA	-14	NA	36529815	36546675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.4	chr16	+	2924	8	FSM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	-40	-6	17	0	multi-exon	FALSE	canonical	0	0	junction_7	133.242452020398	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36514359	36547109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543001_36545878
ES.13682.40	chr16	+	3201	8	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-6035	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.288516720107	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAAATTCCTGTGTTT	NA	False	NA	3	True	ATTAAA	-15	NA	36529864	36547100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36529991_36535862_36535983_36536468_36536616_36539771_36539882_36540082_36540578_36541899_36542032_36542192_36543042_36545878
ES.13682.41	chr16	+	4987	5	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	18534	486	-3026	-423	3prime_fragment	FALSE	canonical	3	275	junction_2	15.6284996080878	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTACTTCTATTCA	NA	False	NA	23	True	AATAAA	-19	NA	36532873	36546680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.42	chr16	+	7884	2	ISM	ENSMUSG00000022900.15	ENSMUST00000128084.2	823	4	3104	-4478	3104	-3	3prime_fragment	FALSE	canonical	3	298	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAAATTCCTGTGTTT	NA	False	NA	3	True	ATTAAA	-15	NA	36539003	36547100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36542032_36542244
ES.13682.43	chr16	+	4160	3	NNC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	3983	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.5	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTGTGTTTGGCAGA	NA	False	NA	9	True	ATTAAA	-21	NA	36539882	36547106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36542032_36542258_36543042_36545878
ES.13682.44	chr16	+	3828	3	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	25791	-6	4291	0	3prime_fragment	FALSE	canonical	0	0	junction_2	149	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36540190	36547109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36542032_36542244_36543001_36545878
ES.13682.45	chr16	+	2457	3	ISM	ENSMUSG00000022900.15	ENSMUST00000119464.2	2878	8	26735	421	5235	-421	3prime_fragment	FALSE	canonical	0	0	junction_2	149	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36541134	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36542032_36542244_36543001_36545878
ES.13682.46	chr16	+	2146	3	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	27558	73	5998	-10	3prime_fragment	FALSE	canonical	3	279	junction_2	9.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTGGCTAAATTCC	NA	False	NA	-4	True	ATTAAA	-8	NA	36541897	36547093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36542032_36542244_36543042_36545878
ES.13682.47	chr16	+	2868	2	ISM	ENSMUSG00000022900.15	ENSMUST00000128084.2	823	4	6084	-2442	6084	-2039	3prime_fragment	FALSE	canonical	3	298	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTCTTCTACTTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	36541983	36545064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36542032_36542244
ES.13682.5	chr16	+	3142	5	FSM	ENSMUSG00000022900.15	ENSMUST00000153802.2	1922	5	-30	-1190	22	1190	multi-exon	FALSE	canonical	3	17	junction_1	127.887646002262	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTGGGTGATC	NA	False	NA	NA	False	NA	NA	NA	36514364	36538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468
ES.13682.6	chr16	+	5775	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	25	0	intron_retention	FALSE	canonical	3	17	junction_1	125.476425408653	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36514367	36547109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244
ES.13682.7	chr16	+	2478	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14115	484	-7445	-421	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTACTTCTATTCATT	NA	False	NA	25	True	AATAAA	-21	NA	36528454	36546682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.8	chr16	+	2880	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14137	60	-7423	-3	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCTGTGTTTGGCAGA	NA	False	NA	9	True	ATTAAA	-21	NA	36528476	36547106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13682.9	chr16	+	2864	7	NIC	ENSMUSG00000022900.15	novel	3042	8	NA	NA	-7423	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	91.299263718584	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTTGGCAGAGGT	NA	False	NA	12	True	ATTAAA	-24	NA	36528476	36547109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36528783_36529840_36529991_36535862_36535964_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ES.13683.1	chr16	-	3613	19	NIC	ENSMUSG00000022899.11	novel	2158	21	NA	NA	-12	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	0.532870169256969	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGGAAATGAGATAATAT	8325	False	NA	NA	False	AATAAA	-21	NA	36602839	36570536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580466_36581791_36581837_36581925_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36601927_36602070_36602633
ES.13683.2	chr16	-	7054	15	ISM	ENSMUSG00000022899.11	ENSMUST00000023616.11	3994	22	18614	1	-2955	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	0.589015089373952	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTGGGAAATGAGATAA	NA	False	NA	NA	False	AATAAA	-18	NA	36586710	36570539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580466_36581791_36581837_36581925_36582016_36582184_36582272_36582666
ES.13684.1	chr16	-	903	6	NNC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.74108003776293	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGGTATTCTCATGT	8182	False	NA	NA	False	AATAAA	-22	NA	36648641	36614106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_36614289_36620948_36621063_36628376_36628523_36630833_36630971_36645019_36645115_36648412
ES.13684.2	chr16	-	3932	3	NIC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-39	-10791	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	8161	False	NA	NA	False	NA	NA	NA	36648662	36624977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_36628523_36630833_36630971_36648412
ES.13684.3	chr16	-	3783	4	ISM	ENSMUSG00000022838.15	ENSMUST00000114829.9	1030	6	-24	11101	-24	-11020	5prime_fragment	FALSE	canonical	2	12	junction_2	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8176	False	NA	NA	False	NA	NA	NA	36648647	36625206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_36628523_36630833_36630971_36645019_36645115_36648412
ES.13684.4	chr16	-	3632	3	NIC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-17	-11027	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8183	False	NA	NA	False	NA	NA	NA	36648640	36625213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_36628523_36645019_36645115_36648412
ES.13684.5	chr16	-	3687	3	NIC	ENSMUSG00000022838.15	novel	1030	6	NA	NA	-30	-11027	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8170	False	NA	NA	False	NA	NA	NA	36648653	36625213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_36628523_36630833_36630971_36648412
ES.13685.1	chr16	+	2399	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-28	691	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGCGAGTAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	36648718	36680625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.10	chr16	+	4275	7	ISM	ENSMUSG00000022837.15	ENSMUST00000114819.8	2797	14	-7	25698	-7	-637	5prime_fragment	FALSE	canonical	3	51	junction_1	77.8880963662327	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	36648761	36667385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720
ES.13685.11	chr16	+	3920	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-7	2255	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATCCCCCAAACA	NA	False	NA	NA	False	NA	NA	NA	36648761	36682189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.12	chr16	+	2795	14	FSM	ENSMUSG00000022837.15	ENSMUST00000114819.8	2797	14	-6	8	-6	0	multi-exon	FALSE	canonical	3	51	junction_1	68.0198369951889	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	False	NA	44	True	AATAAA	-11	NA	36648762	36693075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812
ES.13685.13	chr16	+	3109	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-6	890	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTATCTGGAAGACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	36648762	36693973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.14	chr16	+	1504	12	NNC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	97.3017798585224	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTCAAGTCT	NA	False	NA	6	True	NA	NA	NA	36648769	36679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36648855_36649365_36649436_36651858_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36679723
ES.13685.15	chr16	+	1536	12	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	2	14018	2	-877	5prime_fragment	FALSE	canonical	3	199	junction_1	25.9274257294988	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTTTGCTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	36648771	36679057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816
ES.13685.16	chr16	+	4702	12	NNC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	-1	intron_retention	FALSE	canonical	2	2	junction_8	102.751485481209	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAAGTCTGAAAGCAT	NA	False	NA	14	True	NA	NA	NA	36648771	36679933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36671921_36672031_36676652_36676796_36678816_36678966_36679723
ES.13685.17	chr16	+	2285	16	NNC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.013622179907	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTTGTCATGTTAT	NA	False	NA	43	True	AATAAA	-10	NA	36648771	36693074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36671921_36671953_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.18	chr16	+	2071	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	100.439139947201	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAAAGTTGTCATGTTA	NA	False	NA	42	True	AATAAA	-9	NA	36648773	36693073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648855_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.19	chr16	+	7275	5	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	7	-614	intron_retention	FALSE	canonical	3	249	junction_3	8.5841423566947	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAAAGGAAATGAAATGT	NA	False	NA	NA	False	NA	NA	NA	36648776	36667408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720
ES.13685.2	chr16	+	2314	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-51	-6	-28	-2	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATGTTATTTCAATG	NA	False	NA	50	True	AATAAA	-17	NA	36648718	36693081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.21	chr16	+	5914	12	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	26	-41	intron_retention	FALSE	canonical	1	2	junction_9	99.5764584346128	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGTTTTGGTTTTGT	NA	False	NA	3	True	AATATA	-15	NA	36648834	36693034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36668022_36669988_36670099_36676652_36676796_36687920_36688053_36691812_36691970_36692553
ES.13685.22	chr16	+	4521	11	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	27	-9	intron_retention	FALSE	canonical	3	130	junction_10	43.8136964886552	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTCAAGTCT	NA	False	NA	6	True	NA	NA	NA	36648835	36679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.23	chr16	+	3840	2	ISM	ENSMUSG00000022837.15	ENSMUST00000232162.2	796	8	11365	614	-7177	-614	internal_fragment	FALSE	canonical	3	273	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAAAGGAAATGAAATGT	NA	False	NA	NA	False	NA	NA	NA	36660173	36667408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36660326_36663720
ES.13685.24	chr16	+	4059	1	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	-4015	-628	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAAAAATGTCAA	NA	False	NA	NA	False	NA	NA	NA	36663335	36667394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36663300_36667400
ES.13685.25	chr16	+	3186	1	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	7006	2212	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	36678960	36682146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36679000_36682100
ES.13685.26	chr16	+	2870	1	Intergenic	novelGene_11498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGGTGGATCTGTATAG	NA	False	NA	NA	False	NA	NA	NA	36684852	36687722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_36684900_36687700
ES.13685.3	chr16	+	2254	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	False	NA	44	True	AATAAA	-11	NA	36648719	36693075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.4	chr16	+	1671	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	-8	36	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAGGTTTTACTGTTAA	NA	False	NA	51	True	NA	NA	NA	36648738	36679970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.5	chr16	+	2424	15	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	88.7782148309563	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	False	NA	44	True	AATAAA	-11	NA	36648749	36693075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648802_36649365_36649636_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.6	chr16	+	1808	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	10	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	92.5161772640631	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTCAAGTCT	NA	False	NA	6	True	NA	NA	NA	36648756	36679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648802_36649365_36649636_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.7	chr16	+	3014	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	-10	-747	-9	739	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTTTCTAACTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	36648759	36693822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13685.8	chr16	+	1677	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-8	11	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCATGTAGCTTAATCA	NA	False	NA	26	True	NA	NA	NA	36648760	36679945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
ES.13685.9	chr16	+	2099	14	NNC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	-8	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.0675078462535	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGTTTTGGTTTTGT	NA	False	NA	3	True	AATATA	-15	NA	36648760	36693034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36676668_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ES.13686.1	chr16	+	11154	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_7	28.3735413940465	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTATCTGTTG	1426	False	NA	NA	False	AATAAA	-21	NA	36695478	36753447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713695_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.10	chr16	+	10003	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-10	-101	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	28.4603900474483	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTCTGGAACTTGTAAT	1467	False	NA	NA	False	TATAAA	-15	NA	36695519	36752334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713692_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.11	chr16	+	11112	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.543029717508	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1468	False	NA	NA	False	AATAAA	-12	NA	36695520	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706492_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718878_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.12	chr16	+	11011	22	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	29.6003615838674	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1468	False	NA	NA	False	AATAAA	-12	NA	36695520	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713692_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.13	chr16	+	11147	23	Fusion	ENSMUSG00000034243.18_ENSMUSG00000116908.2	novel	10847	21	NA	NA	-9	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	28.6777478742752	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAATTGTGTGAGACTA	1468	False	NA	NA	False	AATAAA	-14	NA	36695520	36753440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_36695626_36705348_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.14	chr16	+	11169	24	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.9717286091309	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAATTGTGTGAGACTA	1472	False	NA	NA	False	AATAAA	-14	NA	36695524	36753440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706492_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36743971_36744019_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.15	chr16	+	11020	22	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	29.5451535750492	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1495	False	NA	NA	False	AATAAA	-12	NA	36695547	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738249_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.16	chr16	+	10979	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.6996917636019	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAATTGTGTGAGACTA	1539	False	NA	NA	False	AATAAA	-14	NA	36695591	36753440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706492_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36743971_36744019_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.17	chr16	+	9430	12	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	18417	4	18417	-4	3prime_fragment	FALSE	canonical	3	43	junction_2	18.0316526105559	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTGAGACTATCT	2358	False	NA	NA	False	AATAAA	-17	NA	36724912	36753443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.18	chr16	+	5828	10	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	28360	793	-9963	219	3prime_fragment	FALSE	canonical	3	70	junction_5	8.64098759787715	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTATCACTTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	36734855	36752654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.19	chr16	+	9097	9	NIC	ENSMUSG00000034243.18	novel	10847	21	NA	NA	-7612	-9	intron_retention	FALSE	canonical	3	70	junction_4	8.88467782195843	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	NA	False	NA	NA	False	AATAAA	-12	NA	36737206	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36737363_36738270_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.2	chr16	+	5900	21	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	30.6192749750872	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1437	False	NA	NA	False	AATAAA	-12	NA	36695489	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.20	chr16	+	3044	9	NNC	ENSMUSG00000034243.18	novel	10847	21	NA	NA	-6123	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.2448342696732	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	NA	False	NA	NA	False	AATAAA	-12	NA	36738695	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36739523_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.21	chr16	+	2022	1	NIC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-5442	-7335	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAGCATAGCAGTACAT	NA	False	NA	NA	False	NA	NA	NA	36739376	36741398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36739400_36741400
ES.13686.3	chr16	+	11157	23	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	26.4968421633239	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTGAGACTATCT	1437	False	NA	NA	False	AATAAA	-17	NA	36695489	36753443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.5	chr16	+	11047	22	NIC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	27.5999934273218	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTGTGTGAGACTAT	1450	False	NA	NA	False	AATAAA	-15	NA	36695502	36753441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36695626_36705372_36705551_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.6	chr16	+	11017	22	NNC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	28.4464727876578	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAATTGTGTGAGACT	1450	False	NA	NA	False	AATAAA	-13	NA	36695502	36753439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36695626_36705372_36705551_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.8	chr16	+	10916	21	NIC	ENSMUSG00000034243.18	novel	11001	22	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	29.6230906557705	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGTGAGACTATCT	1460	False	NA	NA	False	AATAAA	-17	NA	36695512	36753443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36695626_36705372_36705551_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13686.9	chr16	+	10993	23	Fusion	ENSMUSG00000034243.18_ENSMUSG00000116908.2	novel	10847	21	NA	NA	-12	-9	multi-exon	FALSE	canonical	0	0	junction_1	30.5891192236068	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAATTGTGTGAGAC	1465	False	NA	NA	False	AATAAA	-12	NA	36695517	36753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_36695626_36706495_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36743971_36744019_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ES.13687.1	chr16	+	170	1	Intergenic	novelGene_11499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGTGTTAAG	537	False	NA	NA	False	NA	NA	NA	36828936	36829106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_36828900_36829100
ES.13688.1	chr16	+	8578	30	NNC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.70903696266891	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	3723	False	NA	2	True	AATAAA	-15	NA	36832122	36915779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833467_36833649_36835440_36835572_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.11	chr16	+	8483	30	NNC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	8.45720850772658	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAATGTTTTTAATTT	3739	False	NA	0	True	AATAAA	-13	NA	36832138	36915777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560_36837718_36843095_36843205_36848207_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.12	chr16	+	1078	5	ISM	ENSMUSG00000034206.16	ENSMUST00000183112.8	7386	26	-5	77402	-5	0	5prime_fragment	FALSE	canonical	3	18	junction_3	8.6421930087218	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTATTTGTTT	3743	False	NA	NA	False	ATTAAA	-16	NA	36832142	36837952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560
ES.13688.13	chr16	+	8476	31	NNC	ENSMUSG00000034206.16	novel	8628	31	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	8.7086164228309	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAATGTTTTTAATTTT	3743	False	NA	1	True	AATAAA	-14	NA	36832142	36915778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848207_36848352_36849704_36849853_36853753_36853901_36855158_36855272_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.14	chr16	+	7456	25	NNC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	10978	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.57311284708704	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAATGTTTTTAATTTT	NA	False	NA	1	True	AATAAA	-14	NA	36843154	36915778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855272_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.15	chr16	+	10010	17	NIC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	4450	0	intron_retention	FALSE	canonical	3	12	junction_2	6.00520607473216	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	NA	False	NA	2	True	AATAAA	-15	NA	36865247	36915779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.16	chr16	+	5955	15	NIC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	8195	63	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.8027336915484	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGAGGATTTTTTTGTGT	NA	False	NA	65	True	TTTAAA	-41	NA	36868992	36915842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.17	chr16	+	6089	17	NNC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	8248	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.49670995661129	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTAATGTTTTTAATT	NA	False	NA	-1	True	AATAAA	-12	NA	36869045	36915776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894022_36894091_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.19	chr16	+	4754	15	NNC	ENSMUSG00000034206.16	novel	8552	30	NA	NA	20719	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.41482244134913	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAATGTTTTTAATTTT	1451	False	NA	1	True	AATAAA	-14	NA	36881516	36915778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36883332_36885622_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.20	chr16	+	2946	14	ISM	ENSMUSG00000034206.16	ENSMUST00000054034.7	8552	30	53469	0	-20660	0	3prime_fragment	FALSE	canonical	3	22	junction_2	3.30500785522167	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	655	False	NA	2	True	AATAAA	-15	NA	36885616	36915779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.21	chr16	+	1072	5	ISM	ENSMUSG00000034206.16	ENSMUST00000182717.2	2202	6	3355	352	3355	73	3prime_fragment	FALSE	canonical	3	27	junction_1	3.08220700148449	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAAATCTCAAATTG	NA	False	NA	NA	False	AGTAAA	-15	NA	36909631	36915427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.3	chr16	+	8674	31	FSM	ENSMUSG00000034206.16	ENSMUST00000182946.8	8628	31	-24	-22	-24	2	multi-exon	FALSE	canonical	2	7	junction_10	7.47655595103045	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGTTTTTAATTTTTAA	3724	False	NA	4	True	AATAAA	-17	NA	36832123	36915781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.4	chr16	+	8914	33	NNC	ENSMUSG00000034206.16	novel	8628	31	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	10.3843613639694	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	3724	False	NA	2	True	AATAAA	-15	NA	36832123	36915779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36871885_36872060_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894022_36894091_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.5	chr16	+	2887	4	NIC	ENSMUSG00000034206.16	novel	1206	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	18	junction_2	9.97775303139718	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTATTTGTTT	3726	False	NA	NA	False	ATTAAA	-16	NA	36832125	36837952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36832422_36833468_36835572_36836674_36836771_36837560
ES.13688.6	chr16	+	4271	4	ISM	ENSMUSG00000034206.16	ENSMUST00000071452.12	7290	25	-22	74130	-22	3272	5prime_fragment	FALSE	canonical	3	20	junction_3	9.03081145609604	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAATCTACAATTTAC	3726	False	NA	NA	False	NA	NA	NA	36832125	36841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560
ES.13688.7	chr16	+	8483	31	NNC	ENSMUSG00000034206.16	novel	8628	31	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	8.80757249946507	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	3729	False	NA	2	True	AATAAA	-15	NA	36832128	36915779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855272_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906953_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.8	chr16	+	8453	30	NNC	ENSMUSG00000034206.16	novel	8628	31	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	8.63543566406493	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAATGTTTTTAATTT	3729	False	NA	0	True	AATAAA	-13	NA	36832128	36915777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855272_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ES.13688.9	chr16	+	6060	3	NIC	ENSMUSG00000034206.16	novel	1206	5	NA	NA	-19	3272	intron_retention	FALSE	canonical	3	20	junction_2	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAATCTACAATTTAC	3729	False	NA	NA	False	NA	NA	NA	36832128	36841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_36832422_36833468_36835572_36837560
ES.13689.1	chr16	-	3373	1	Antisense	novelGene_ENSMUSG00000034206.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGGTGAAAACCTATAAT	NA	False	NA	NA	False	NA	NA	NA	36840896	36837523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_36837500_36840900
ES.13689.2	chr16	-	3434	2	Antisense	novelGene_ENSMUSG00000034206.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTGGTGAAAACCTATA	NA	False	NA	NA	False	NA	NA	NA	36876478	36837525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_36840891_36876409
ES.1369.1	chr1	-	255	2	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATATTATGCACTATA	9457	False	NA	NA	False	NA	NA	NA	133600816	133600357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133600449_133600652
ES.13690.1	chr16	-	7041	8	ISM	ENSMUSG00000022829.15	ENSMUST00000114780.8	3476	26	196279	-5718	15893	5004	3prime_fragment	FALSE	canonical	0	0	junction_1	0.451753951452626	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGCTCTCTTATGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	37009045	36930299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_36936060_36936193_36936415_36942160_36942273_36950160_36950327_36954534_36954896_36960205_36960446_36994658_36994725_37008930
ES.13691.1	chr16	-	160	1	Intergenic	novelGene_11500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	37043987	37043827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37043800_37044000
ES.13692.1	chr16	+	170	1	Intergenic	novelGene_11501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAAGATTCGTAGTT	NA	False	NA	NA	False	NA	NA	NA	37273883	37274053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_37273900_37274100
ES.13693.1	chr16	-	3119	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	-35	0	-35	0	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360186	37330151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ES.13693.11	chr16	-	3010	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	40	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.516797303757	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGACTAAAGAGGTGGT	NA	False	NA	NA	False	AATAAA	-24	NA	37360098	37330163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332173_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ES.13693.12	chr16	-	2553	4	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	40	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	145.641874320388	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGACTAAAGAGGTGGT	NA	False	NA	NA	False	AATAAA	-24	NA	37360098	37330163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336080_37336323_37343112_37343322_37360014
ES.13693.13	chr16	-	2177	4	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	3822	544	3809	-544	3prime_fragment	FALSE	canonical	3	294	junction_2	12.5521135891752	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAACTTTTATAGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	37356329	37330695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082
ES.13693.14	chr16	-	1638	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	68	1378	55	-1378	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTATCTAATTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	37360083	37331529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ES.13693.15	chr16	-	3794	2	FSM	ENSMUSG00000022828.11	ENSMUST00000130350.2	3798	2	34	-30	34	30	multi-exon	FALSE	canonical	3	285	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCCCAAAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	37360104	37352851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37356556_37360014
ES.13693.2	chr16	-	2794	4	NIC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	143.86645041689	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360063	37330151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_37332182_37336080_37336323_37356082_37356556_37360014
ES.13693.3	chr16	-	2975	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	99	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.516797303757	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGTGGTTATACTCAC	NA	False	NA	NA	False	AATAAA	-33	NA	37360039	37330154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336074_37336323_37343112_37343315_37356082_37356556_37360014
ES.13693.4	chr16	-	3193	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	51	-3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	117.992584512757	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGTGGTTATACTCAC	NA	False	NA	NA	False	AATAAA	-33	NA	37360087	37330154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37359838
ES.13693.5	chr16	-	3017	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	126.618521551944	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAGAGGTGGTTATACT	NA	False	NA	NA	False	AATAAA	-30	NA	37360134	37330157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360058
ES.13693.6	chr16	-	6025	1	NIC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	23956	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAGAGGTGGTTATACT	NA	False	NA	NA	False	AATAAA	-30	NA	37336182	37330157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_37330200_37336200
ES.13693.7	chr16	-	2866	6	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	20	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.426907292349	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTAAAGAGGTGGTTATA	NA	False	NA	NA	False	AATAAA	-28	NA	37360118	37330159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356130_37356306_37356556_37360014
ES.13693.9	chr16	-	3314	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	75	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	132.227786414203	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGACTAAAGAGGTGGT	NA	False	NA	NA	False	AATAAA	-24	NA	37360063	37330163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37359684
ES.13694.2	chr16	+	8574	6	NNC	ENSMUSG00000022827.15	novel	2031	8	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	46.7700759032953	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTCATTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	37360253	37392746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37360325_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37390789_37391391
ES.13694.3	chr16	+	2024	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	7	0	7	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37360253	37392747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ES.13694.4	chr16	+	1952	8	NNC	ENSMUSG00000022827.15	novel	2031	8	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3096816245099	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACACAGTGTCATTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	37360259	37392742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37360282_37362228_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ES.13694.5	chr16	+	10053	2	ISM	ENSMUSG00000022827.15	ENSMUST00000128036.2	4332	4	-3	12208	2	-12208	5prime_fragment	FALSE	canonical	3	122	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTTCTAAACATGGCAA	NA	False	NA	NA	False	NA	NA	NA	37360263	37372202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_37360323_37362208
ES.13694.6	chr16	+	2057	9	NNC	ENSMUSG00000022827.15	novel	1960	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.4769096111166	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTCATTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	37360271	37392746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37384030_37384129_37387008_37387114_37387681_37387754_37390749_37390789_37391391
ES.13694.7	chr16	+	1819	7	NIC	ENSMUSG00000022827.15	novel	1960	8	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	43.1100014175623	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACACAGTGTCATTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	37360284	37392741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_37360323_37362208_37362301_37377182_37377313_37384030_37384129_37387681_37387754_37390749_37390789_37391391
ES.13694.8	chr16	+	2847	3	ISM	ENSMUSG00000022827.15	ENSMUST00000130028.2	1960	8	26039	-2	2205	-1	3prime_fragment	FALSE	canonical	3	103	junction_2	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTCATTTCTTTTA	1803	False	NA	NA	False	ATTAAA	-19	NA	37386300	37392746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_37387754_37390749_37390789_37391391
ES.13694.9	chr16	+	1950	1	NIC	ENSMUSG00000022827.15	novel	2031	8	NA	NA	6694	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATACACAGTGTCATT	6292	False	NA	NA	False	ATTAAA	-12	NA	37390789	37392739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_37390800_37392700
ES.13695.1	chr16	-	8218	1	FSM	ENSMUSG00000022820.5	ENSMUST00000231881.2	933	1	-3	-7282	-3	1018	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTCTTAGATACTCTAG	NA	False	NA	NA	False	NA	NA	NA	37474731	37466513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37466500_37474700
ES.13695.2	chr16	-	1876	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	89	-994	2	994	multi-exon	FALSE	canonical	3	6062	junction_1	348	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37474726	37466537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37468082_37469375_37469523_37474541
ES.13695.3	chr16	-	516	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	23	432	23	-1	multi-exon	FALSE	canonical	3	6062	junction_1	348	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCTTTTTCTTGGA	NA	False	NA	-3	True	AATAAA	-22	NA	37474792	37467963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37468082_37469375_37469523_37474541
ES.13695.4	chr16	-	6765	1	FSM	ENSMUSG00000022820.5	ENSMUST00000231881.2	933	1	0	-5832	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCTTTTTCTTGGA	NA	False	NA	-3	True	AATAAA	-22	NA	37474728	37467963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37468000_37474700
ES.13695.5	chr16	-	5471	2	FSM	ENSMUSG00000022820.5	ENSMUST00000135019.2	465	2	-5008	2	-1	-2	multi-exon	FALSE	canonical	3	6062	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTTCTTTTTCTTGG	NA	False	NA	-4	True	AATAAA	-21	NA	37474729	37467964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37468082_37469375
ES.13695.6	chr16	-	1747	2	NIC	ENSMUSG00000022820.5	novel	971	3	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	6758	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACAGTTTCTTTTTCTTG	NA	False	NA	-5	True	AATAAA	-20	NA	37474731	37467965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_37469523_37474541
ES.13695.9	chr16	-	935	1	FSM	ENSMUSG00000022820.5	ENSMUST00000231881.2	933	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATATTCTCTATCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	37474728	37473793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_37473800_37474700
ES.13696.1	chr16	-	175	1	Intergenic	novelGene_11502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACCCTACAATGTA	NA	False	NA	NA	False	NA	NA	NA	37479449	37479274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37479300_37479400
ES.13697.1	chr16	-	173	1	Intergenic	novelGene_11503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	37514291	37514118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37514100_37514300
ES.13698.1	chr16	+	3044	11	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	3	150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.0426198504395	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGGTTCTTGGAGG	5154	False	NA	NA	False	NA	NA	NA	37597237	37656136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37597515_37597655_37597717_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649581_37651918_37651996_37654243
ES.13698.10	chr16	+	3198	7	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	44281	21	-1548	-21	3prime_fragment	FALSE	canonical	3	116	junction_5	10.5738146170413	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	37641515	37656855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13698.2	chr16	+	3678	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	120	-9	-62	9	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGTTTCCTTATTGCC	5271	False	NA	NA	False	NA	NA	NA	37597354	37656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13698.3	chr16	+	2908	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	141	740	-41	150	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTGGTTCTTGGAGG	5292	False	NA	NA	False	NA	NA	NA	37597375	37656136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13698.4	chr16	+	2451	10	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	-3	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	43.7004393005577	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAATAAAATAA	5330	False	NA	NA	False	NA	NA	NA	37597413	37656855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649498_37655215
ES.13698.6	chr16	+	175	1	Intergenic	novelGene_11504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	37602280	37602455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_37602300_37602500
ES.13698.7	chr16	+	4525	10	NNC	ENSMUSG00000022816.12	novel	884	3	NA	NA	-1194	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.3845850760638	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGTTTCCTTATTGCC	NA	False	NA	NA	False	NA	NA	NA	37634873	37656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37635938_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13698.8	chr16	+	3722	10	NNC	ENSMUSG00000022816.12	novel	884	3	NA	NA	-1171	119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.3845850760638	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37634896	37656105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37635938_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13698.9	chr16	+	1202	11	NNC	ENSMUSG00000022816.12	novel	298	3	NA	NA	-1068	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.4838508183847	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTAGGAATGCTTTAAG	NA	False	NA	NA	False	AATAAA	-45	NA	37634999	37654475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37635083_37635869_37635938_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ES.13699.1	chr16	+	8797	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-190	-3	-190	3	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTCCGGTCATCTT	NA	False	NA	25	True	AATAAA	-25	NA	37688560	37709223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.10	chr16	+	4093	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-20	4531	-20	-4531	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATAGTTGTGCACACC	NA	False	NA	NA	False	AATAAA	-12	NA	37688730	37704689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.11	chr16	+	2157	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-18	6465	-18	-6465	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGAGGCTAAAGTCTTC	NA	False	NA	NA	False	AGTAAA	-21	NA	37688732	37702755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.12	chr16	+	6241	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-18	2381	-18	-2381	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCAGCACGTCCCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	37688732	37706839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.13	chr16	+	8191	4	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	-18	-426	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	66.9145391940762	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCAACAGTGGAGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	37688732	37708794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697415_37697540_37698648_37698927_37701615
ES.13699.14	chr16	+	8402	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-15	217	-15	-217	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTATTAGAATCTAATT	NA	False	NA	NA	False	CATAAA	-23	NA	37688735	37709003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.15	chr16	+	4430	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	8	4166	8	-4166	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACATTTTACTAACTA	NA	False	NA	NA	False	AAGAAA	-31	NA	37688758	37705054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.16	chr16	+	8472	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	9	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.2630508407675	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGTGTTCTTCTGAGT	NA	False	NA	3	True	AATAAA	-3	NA	37688759	37709201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689128_37689231_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.17	chr16	+	8307	3	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTCTTGGTCCGGTC	NA	False	NA	20	True	AATAAA	-20	NA	37688763	37709218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37698801_37698927_37701615
ES.13699.18	chr16	+	7766	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.2630508407675	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTTTCTTCTTGGTC	NA	False	NA	15	True	AATAAA	-15	NA	37688763	37709213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615_37705906_37706723
ES.13699.19	chr16	+	7590	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	82	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.2630508407675	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTCTTCTTGGTCCGG	NA	False	NA	18	True	AATAAA	-18	NA	37688832	37709216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615_37701664_37702591
ES.13699.2	chr16	+	3446	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	-58	-426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.2630508407675	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCAACAGTGGAGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	37688692	37708794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615_37701721_37706510
ES.13699.20	chr16	+	12150	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	89	-3635	89	3635	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTGATAGTTTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	37688839	37712855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.21	chr16	+	1610	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	112	6882	112	-6882	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTTGTTTTGTGTGT	NA	False	NA	NA	False	ATTAAA	-1	NA	37688862	37702338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.22	chr16	+	5501	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	320	2783	320	-2783	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	37689070	37706437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.4	chr16	+	1298	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-43	7349	-43	-7349	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGGTCTTGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37688707	37701871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.5	chr16	+	5161	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-43	3486	-43	-3486	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCATCTTGACTTAAGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	37688707	37705734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.6	chr16	+	5904	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	-32	17608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.2630508407675	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCCACCCATGCCCAC	NA	False	NA	NA	False	NA	NA	NA	37688718	37726828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615_37706457_37726796
ES.13699.7	chr16	+	8813	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	-32	-177	-32	177	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGTTTCAGATTTGT	NA	False	NA	NA	False	NA	NA	NA	37688718	37709397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ES.13699.9	chr16	+	3763	5	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	-21	-71	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	62.2630508407675	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTGTTTTAGCATTTA	NA	False	NA	-49	True	AATACA	-14	NA	37688729	37709149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615_37701725_37706515
ES.137.1	chr1	-	210	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCTAACACAAAATATCC	NA	False	NA	NA	False	NA	NA	NA	15012999	15012789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_15012800_15013000
ES.1370.1	chr1	-	2064	3	NNC	ENSMUSG00000051998.15	novel	2309	6	NA	NA	6058	-39	intron_retention	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAATAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	133611766	133606867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133608374_133610720_133610788_133611275
ES.13700.1	chr16	+	157	1	Intergenic	novelGene_11505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATCTTTAG	NA	False	NA	NA	False	NA	NA	NA	37811938	37812095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_37811900_37812100
ES.13701.1	chr16	-	990	3	Intergenic	novelGene_11507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATGCCTTGGCGTT	2468	False	NA	NA	False	AATACA	-9	NA	37833341	37829322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37830178_37831065_37831168_37833308
ES.13701.2	chr16	-	831	3	Intergenic	novelGene_11506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATGCCTTGGCGTT	2475	False	NA	NA	False	AATACA	-9	NA	37833334	37829322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37830026_37831065_37831168_37833308
ES.13702.1	chr16	-	706	5	Intergenic	novelGene_11508	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGCATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	37908709	37873958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37874085_37878897_37879136_37889473_37889606_37902003_37902096_37908591
ES.13702.2	chr16	-	3741	1	Intergenic	novelGene_11509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGTTTGGTTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	37909168	37905427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37905400_37909200
ES.13703.1	chr16	+	2957	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	18	5328	18	-23	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAACCAGTTTCATT	NA	False	NA	NA	False	NA	NA	NA	37909380	38061118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ES.13703.2	chr16	+	3534	8	ISM	ENSMUSG00000022812.15	ENSMUST00000114750.2	1750	12	-957	31259	330	30	5prime_fragment	FALSE	canonical	3	30	junction_5	7.55658923167897	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTCATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	37909692	38029882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356
ES.13703.3	chr16	+	2596	12	FSM	ENSMUSG00000022812.15	ENSMUST00000114750.2	1750	12	-936	90	351	-90	multi-exon	FALSE	canonical	1	2	junction_9	16.4818959031412	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCATTTTAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	37909713	38061051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38037474_38037514_38040333_38040521_38049039_38049139_38060863
ES.13703.4	chr16	+	7210	11	NNC	ENSMUSG00000022812.15	novel	8303	11	NA	NA	476	-610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.5399449792632	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGTGTGTGGTCTTTA	NA	False	NA	17	True	AATAAA	-32	NA	37909838	38065836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011896_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ES.13703.5	chr16	+	2596	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	483	5224	483	81	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTCTTTTCTTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	37909845	38061222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ES.13703.6	chr16	+	2381	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	484	5438	484	-133	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATTAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	37909846	38061008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ES.13703.7	chr16	+	5599	7	NIC	ENSMUSG00000022812.15	novel	8303	11	NA	NA	527	30	intron_retention	FALSE	canonical	3	30	junction_5	7.02376916856849	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTCATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	37909889	38029882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38014357_38028356
ES.13703.8	chr16	+	1217	10	NNC	ENSMUSG00000022812.15	novel	656	2	NA	NA	24095	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.4704018478297	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATTAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	37988751	38061008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_37988911_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ES.13704.1	chr16	-	164	1	Intergenic	novelGene_11510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGTTTCCCCGTA	NA	False	NA	NA	False	NA	NA	NA	37916037	37915873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37915900_37916000
ES.13705.1	chr16	-	3883	1	Intergenic	novelGene_11511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAATGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	37935387	37931504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_37931500_37935400
ES.13706.1	chr16	-	357	1	Intergenic	novelGene_11512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	38043462	38043105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38043100_38043500
ES.13707.1	chr16	-	1156	1	Antisense	novelGene_ENSMUSG00000022812.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTAAAAACTGACAGTCT	NA	False	NA	NA	False	AAGAAA	-37	NA	38065887	38064731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_38064700_38065900
ES.13708.2	chr16	-	2254	12	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	10897	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.0613493252827	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38151277	38118115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38140610_38140754_38141732_38141916_38144498_38144657_38148569_38148748_38151026
ES.13708.3	chr16	-	172	1	Intergenic	novelGene_11513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATCTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	38123539	38123367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38123400_38123500
ES.13708.4	chr16	-	5092	1	NIC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	31463	-7504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTTCACTAGGTCATA	NA	False	NA	NA	False	NA	NA	NA	38130711	38125619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38125600_38130700
ES.13708.5	chr16	-	1585	3	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	17723	21520	17392	2907	internal_fragment	FALSE	canonical	2	3	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATGGCTGTGTCCAGA	NA	False	NA	NA	False	NA	NA	NA	38144782	38139635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38140754_38141732_38141916_38144498
ES.13708.6	chr16	-	2107	9	FSM	ENSMUSG00000022805.18	ENSMUST00000114740.3	2529	9	-55	477	-55	-477	multi-exon	FALSE	canonical	0	0	junction_4	3.3166247903554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	38162229	38143019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38144022_38144498_38144657_38148569_38148748_38152529_38152712_38153115_38153173_38154103_38154188_38155865_38156024_38156705_38156783_38162018
ES.13708.7	chr16	-	188	1	Intergenic	novelGene_11514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAGCAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	38151816	38151628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38151600_38151800
ES.13709.1	chr16	-	225	1	Intergenic	novelGene_11515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAGTGTGTATCTCAGT	NA	False	NA	NA	False	NA	NA	NA	38163571	38163346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38163300_38163600
ES.1371.1	chr1	+	2561	8	Antisense	novelGene_ENSMUSG00000026463.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.728431359084683	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGCCCATGGCTACTAA	8978	False	NA	NA	False	NA	NA	NA	133619385	133643700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_133620048_133620142_133620283_133639388_133639492_133640016_133640358_133640453_133640627_133641979_133642034_133642168_133642299_133642742
ES.1371.2	chr1	+	386	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	133625077	133625463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133625100_133625500
ES.1371.3	chr1	+	4687	4	Antisense	novelGene_ENSMUSG00000026463.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAACTAATGCTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	133639042	133646878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_133642967_133644240_133644351_133645525_133645741_133646440
ES.13710.1	chr16	+	449	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	-2	-3	-2	3	multi-exon	FALSE	canonical	3	2901	junction_2	455	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTGTTTCTTTTTCT	NA	False	NA	31	True	ATTAAA	-33	NA	38167350	38173128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38167570_38169602_38169692_38172987
ES.13710.10	chr16	+	2392	2	FSM	ENSMUSG00000046516.11	ENSMUST00000144812.2	2396	2	4	0	4	0	multi-exon	FALSE	canonical	3	2901	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGAAGGAAAGAAA	NA	False	NA	-4	True	GATAAA	-25	NA	38167405	38173093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38169692_38172987
ES.13710.3	chr16	+	3723	2	FSM	ENSMUSG00000046516.11	ENSMUST00000120495.2	3690	2	-25	-8	1	7	multi-exon	FALSE	canonical	3	3811	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGAACCGTCTTTGTT	NA	False	NA	17	True	ATTAAA	-19	NA	38167358	38173114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38167570_38169602
ES.13710.4	chr16	+	1154	1	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	3	-4571	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	38167360	38168514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38167400_38168500
ES.13710.5	chr16	+	486	4	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	1753.17641883398	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTCTTTGTTGTGTTTC	NA	False	NA	24	True	ATTAAA	-26	NA	38167361	38173121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38167570_38169602_38169692_38170038_38170094_38172987
ES.13710.6	chr16	+	356	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1450.5	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGAAGGAAAGAAA	NA	False	NA	-4	True	GATAAA	-25	NA	38167394	38173093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38167556_38169602_38169692_38172987
ES.13710.7	chr16	+	3318	3	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	103	junction_2	1854	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAGAAGGAAAGAA	NA	False	NA	-5	True	GATAAA	-24	NA	38167394	38173092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38167570_38169602_38169692_38170038
ES.13710.8	chr16	+	5712	1	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATATGCTGAACCG	NA	False	NA	9	True	ATTAAA	-11	NA	38167394	38173106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38167400_38173100
ES.13711.1	chr16	-	4655	1	Antisense	novelGene_ENSMUSG00000046516.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCCCCAGTCTCATTA	NA	False	NA	NA	False	NA	NA	NA	38175107	38170452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_38170500_38175100
ES.13712.1	chr16	-	2357	1	Intergenic	novelGene_11516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAAGCTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	38202961	38200604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38200600_38203000
ES.13713.1	chr16	+	5570	2	Antisense	novelGene_ENSMUSG00000002847.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	38212138	38219536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38217363_38219190
ES.13714.1	chr16	+	1852	1	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAGAAGAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	38262663	38264515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38262700_38264500
ES.13715.1	chr16	+	613	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTTTGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	38264619	38265695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38264765_38265227
ES.13716.1	chr16	+	3522	2	NNC	ENSMUSG00000097576.3	novel	921	2	NA	NA	-5564	-26	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAAAGGAGGTGTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	38266779	38273830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38266899_38270427
ES.13716.10	chr16	+	2215	1	Intergenic	novelGene_11519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTGCTTTGGGTTAC	NA	False	NA	NA	False	NA	NA	NA	38310617	38312832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38310600_38312800
ES.13716.11	chr16	+	5149	1	Genic_Genomic	ENSMUSG00000075122.6	novel	NA	NA	NA	NA	32070	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTAATTTGTCAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	38311549	38316698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_38311500_38316700
ES.13716.12	chr16	+	3711	1	Genic_Genomic	ENSMUSG00000075122.6	novel	NA	NA	NA	NA	35976	2469	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAGATCAG	NA	False	NA	NA	False	NA	NA	NA	38315455	38319166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_38315500_38319200
ES.13716.2	chr16	+	1333	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTGTGATTATTTTT	NA	False	NA	NA	False	CATAAA	-14	NA	38266781	38271455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38267004_38270344
ES.13716.3	chr16	+	1230	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTGATTATTTTTAT	NA	False	NA	NA	False	CATAAA	-16	NA	38266781	38271457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38266899_38270344
ES.13716.4	chr16	+	1137	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAGTGAGCACAACTTT	NA	False	NA	NA	False	CATAAA	-2	NA	38267938	38271443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38267977_38270344
ES.13716.5	chr16	+	2768	6	Fusion	ENSMUSG00000075122.6_ENSMUSG00000097576.3	novel	485	2	NA	NA	3	-8	multi-exon	FALSE	canonical	0	0	junction_1	0.632455532033676	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGATATTTGCTAATT	NA	False	NA	NA	False	AATAAA	-10	NA	38272754	38316689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_38272823_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ES.13716.6	chr16	+	3095	6	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	3338	4	-34	-4	3prime_fragment	FALSE	canonical	1	1	junction_3	0.8	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATTTGCTAATTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	38279260	38316693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ES.13716.7	chr16	+	4327	2	ISM	ENSMUSG00000075122.6	ENSMUST00000232409.2	748	4	-214	8641	-29	-8641	5prime_fragment	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAGCAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38279265	38298168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38279652_38294227
ES.13716.8	chr16	+	1218	3	ISM	ENSMUSG00000075122.6	ENSMUST00000099816.3	1701	5	-27	7354	-27	-6868	5prime_fragment	FALSE	canonical	1	2	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTGTAGTCATTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	38279267	38299941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38279652_38294227_38294546_38299425
ES.13716.9	chr16	+	1216	1	Intergenic	novelGene_11518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGCTCTTAAGATCCA	NA	False	NA	NA	False	AATAAA	-36	NA	38303776	38304992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38303800_38305000
ES.13717.1	chr16	+	279	1	Intergenic	novelGene_11520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGGAAGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	38329418	38329697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38329400_38329700
ES.13718.1	chr16	+	5081	1	Antisense	novelGene_ENSMUSG00000034064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAGCAAAAA	NA	False	NA	NA	False	TTTAAA	-21	NA	38343317	38348398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38343300_38348400
ES.13719.1	chr16	+	167	1	Antisense	novelGene_ENSMUSG00000034064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAACAACA	1392	False	NA	NA	False	NA	NA	NA	38354510	38354677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_38354500_38354700
ES.1372.1	chr1	+	1748	2	Antisense	novelGene_ENSMUSG00000102509.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAATAAAGAAATATAA	NA	False	NA	NA	False	NA	NA	NA	133705424	133708395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_133705531_133706753
ES.13720.1	chr16	+	181	1	Intergenic	novelGene_11521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8455	False	NA	NA	False	NA	NA	NA	38361573	38361754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38361600_38361800
ES.13721.1	chr16	+	2102	10	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-3158	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.736274056234	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	3912	False	NA	23	True	AGTAAA	-14	NA	38375901	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376146_38377505_38377590_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.10	chr16	+	1824	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-189	38	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	6881	False	NA	23	True	AGTAAA	-14	NA	38378870	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.11	chr16	+	2123	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-181	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	291.647343275241	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGTTATCTTTCATG	6889	False	NA	7	True	ATTAAA	-15	NA	38378878	38411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38395167_38395352_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.12	chr16	+	4396	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-181	38	intron_retention	FALSE	canonical	1	23	junction_6	245.508634870382	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	6889	False	NA	23	True	AGTAAA	-14	NA	38378878	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38405980_38408666_38411273
ES.13721.13	chr16	+	2028	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-180	-203	-180	47	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGACATTCACTTAG	6890	False	NA	32	True	AGTAAA	-23	NA	38378879	38411755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.14	chr16	+	2801	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-179	-977	-179	5	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTGTGAGCATTACCC	6891	False	NA	9	True	AATAAA	-20	NA	38378880	38412529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.15	chr16	+	1818	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	-170	-3	-170	3	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTTTTTCTTGCGATT	6900	False	NA	3	True	GATAAA	-15	NA	38378889	38411555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.16	chr16	+	2474	7	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-164	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	266.889125959743	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	6906	False	NA	4	True	AATAAA	-15	NA	38378895	38412524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.17	chr16	+	1995	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-63	-10	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	285.656532081778	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAAGATGATGTTATC	7007	False	NA	0	True	ATTAAA	-8	NA	38378996	38411658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38407560_38407742_38408544_38408666_38411273
ES.13721.18	chr16	+	1490	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-46	3	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTTTTTCTTGCGATT	7024	False	NA	3	True	GATAAA	-15	NA	38379013	38411555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.19	chr16	+	3680	10	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-46	955	combination_of_known_junctions	FALSE	canonical	1	23	junction_6	282.891420081196	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGACTGAGATGATTT	7024	False	NA	NA	False	NA	NA	NA	38379013	38413479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38405980_38406043_38406582_38406771_38408544_38408666_38411273
ES.13721.2	chr16	+	1605	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2950	37	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	299.569587074523	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	4120	False	NA	22	True	AGTAAA	-13	NA	38376109	38411745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376146_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.20	chr16	+	4361	7	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-46	38	combination_of_known_junctions	FALSE	canonical	1	310	junction_6	148.18503823111	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7024	False	NA	23	True	AGTAAA	-14	NA	38379013	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38408666_38411273
ES.13721.21	chr16	+	1941	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-40	46	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	317.855817923244	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGTGACATTCACTTA	7030	False	NA	31	True	AGTAAA	-22	NA	38379019	38411754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38399005_38399056_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408670_38411273
ES.13721.23	chr16	+	8010	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-28	38	intron_retention	FALSE	canonical	1	310	junction_7	147.597771124148	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7042	False	NA	23	True	AGTAAA	-14	NA	38379031	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.24	chr16	+	2836	9	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-24	36	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	296.420283339383	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGGCTCTGGAGTGA	7046	False	NA	21	True	AGTAAA	-12	NA	38379035	38411744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38407742_38408544_38408670_38411273
ES.13721.25	chr16	+	1878	12	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-22	38	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_7	313.735794515593	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7048	False	NA	23	True	AGTAAA	-14	NA	38379037	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38399005_38399056_38402331_38402487_38405537_38405647_38405741_38405881_38405980_38406043_38406582_38406771_38408544_38408666_38411273
ES.13721.26	chr16	+	1922	10	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-21	38	combination_of_known_junctions	FALSE	canonical	1	23	junction_6	282.891420081196	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7049	False	NA	23	True	AGTAAA	-14	NA	38379038	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38405980_38406043_38406582_38406771_38408544_38408666_38411273
ES.13721.27	chr16	+	1803	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-20	38	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	251.46172671005	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7050	False	NA	23	True	AGTAAA	-14	NA	38379039	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393471_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.28	chr16	+	1701	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-17	38	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	262.088550233056	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7053	False	NA	23	True	AGTAAA	-14	NA	38379042	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.29	chr16	+	3638	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-17	46	intron_retention	FALSE	canonical	1	310	junction_7	143.492160064583	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGTGACATTCACTTA	7053	False	NA	31	True	AGTAAA	-22	NA	38379042	38411754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38408666_38411273
ES.13721.3	chr16	+	3667	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2949	38	intron_retention	FALSE	non_canonical	0	0	junction_1	300.611356239248	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	4121	False	NA	23	True	AGTAAA	-14	NA	38376110	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376146_38377505_38377590_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38408666_38411273
ES.13721.30	chr16	+	1724	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	-5	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	311.364737887899	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7065	False	NA	23	True	AGTAAA	-14	NA	38379054	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38395167_38395252_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.31	chr16	+	1696	10	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	1	38	combination_of_known_junctions	FALSE	canonical	1	23	junction_6	303.464847355088	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7071	False	NA	23	True	AGTAAA	-14	NA	38379060	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38405980_38406043_38406582_38406771_38408544_38408666_38411273
ES.13721.33	chr16	+	1700	9	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	2	38	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	323.609694500953	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7072	False	NA	23	True	AGTAAA	-14	NA	38379061	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38393415_38393639_38396104_38396189_38399005_38399056_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.35	chr16	+	4443	8	ISM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	4	-194	4	38	intron_retention	FALSE	canonical	3	530	junction_1	74.2840659157776	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	7074	False	NA	23	True	AGTAAA	-14	NA	38379063	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544
ES.13721.36	chr16	+	2409	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	7074	False	NA	4	True	AATAAA	-15	NA	38379063	38412524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.37	chr16	+	2341	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	4	37	intron_retention	FALSE	canonical	1	8	junction_6	286.782534723128	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	7074	False	NA	22	True	AGTAAA	-13	NA	38379063	38411745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405647_38405741_38405881_38405980_38406771_38408544_38408666_38411273
ES.13721.38	chr16	+	3478	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	11	956	combination_of_known_splicesites	FALSE	canonical	1	17	junction_3	252.060893193591	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGACTGAGATGATTTT	7081	False	NA	NA	False	NA	NA	NA	38379070	38413480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.39	chr16	+	1587	8	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	34	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	262.549509422431	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	7104	False	NA	22	True	AGTAAA	-13	NA	38379093	38411745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38379125_38384476_38384670_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.4	chr16	+	1817	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2949	13	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	251.270645917903	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTAGTATACTTGAA	4121	False	NA	23	True	ATTAAA	-31	NA	38376110	38411681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376219_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.40	chr16	+	2113	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	-14	772	-14	44	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGAGTGACATTCACT	NA	False	NA	29	True	AGTAAA	-20	NA	38383159	38411752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.41	chr16	+	1915	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	-13	969	-13	3	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTTTTTCTTGCGATT	NA	False	NA	3	True	GATAAA	-15	NA	38383160	38411555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.42	chr16	+	1895	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	0	772	0	44	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGAGTGACATTCACT	NA	False	NA	29	True	AGTAAA	-20	NA	38383173	38411752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.43	chr16	+	1701	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	1	965	1	7	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTTGCGATTTTTA	NA	False	NA	7	True	GATAAA	-19	NA	38383174	38411559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.44	chr16	+	2056	10	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_4	303.221265419279	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGATGATGTTATCTT	NA	False	NA	2	True	ATTAAA	-10	NA	38383174	38411660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38399005_38399056_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.46	chr16	+	2138	10	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-11	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.051094318996	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	NA	False	NA	22	True	AGTAAA	-13	NA	38383211	38411745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383493_38384476_38384664_38393415_38393639_38395167_38395252_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.47	chr16	+	8008	8	NIC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-9	6	intron_retention	FALSE	canonical	1	126	junction_1	230.038772242189	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTCTTGCGATTTTT	NA	False	NA	6	True	GATAAA	-18	NA	38383213	38411558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.48	chr16	+	4526	7	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-7	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	302.590161035609	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383215	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38408665_38411273
ES.13721.49	chr16	+	1882	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGATGATGTTATCTT	NA	False	NA	2	True	ATTAAA	-10	NA	38383215	38411660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.5	chr16	+	1962	10	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2945	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.736274056234	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	4125	False	NA	23	True	AGTAAA	-14	NA	38376114	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376219_38377505_38377590_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.50	chr16	+	2235	10	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-7	38	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	312.421367884963	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383215	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383493_38384476_38384664_38393415_38393639_38395167_38395352_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.51	chr16	+	2746	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTATTTGTGAGCAT	NA	False	NA	4	True	AATAAA	-15	NA	38383215	38412524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.52	chr16	+	8194	8	NIC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-7	38	intron_retention	FALSE	canonical	1	126	junction_1	230.038772242189	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38383215	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.54	chr16	+	3306	8	ISM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	1300	-955	-77	955	3prime_fragment	FALSE	canonical	1	87	junction_4	247.579630562346	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGACTGAGATGATTT	NA	False	NA	NA	False	NA	NA	NA	38384473	38413479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.55	chr16	+	9694	6	NIC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	-77	38	intron_retention	FALSE	canonical	1	310	junction_5	156.110217474706	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38384473	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38384664_38393415_38393639_38396104_38402487_38405537_38405881_38406582_38408666_38411273
ES.13721.56	chr16	+	3520	8	NIC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	16	38	intron_retention	FALSE	canonical	1	23	junction_5	299.705297427527	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTCTGGAGTGACA	NA	False	NA	23	True	AGTAAA	-14	NA	38384566	38411746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38405980_38406043_38406582_38408666_38411273
ES.13721.57	chr16	+	1571	7	ISM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	10239	797	-2391	19	3prime_fragment	FALSE	canonical	1	310	junction_6	157.418144513973	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAAGATTGACTTGTTT	NA	False	NA	4	True	NA	NA	NA	38393412	38411727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.58	chr16	+	9066	4	NIC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	2884	1311	intron_retention	FALSE	canonical	1	23	junction_2	254.600776816481	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATTATGTGTCTTTG	2491	False	NA	NA	False	AATAAA	-14	NA	38399010	38413835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38402487_38405537_38405881_38405980_38408666_38411273
ES.13721.59	chr16	+	8040	4	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2646	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	324.753239655383	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGATGATGTTATCTT	3305	False	NA	2	True	ATTAAA	-10	NA	38399824	38411660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38402487_38405537_38405881_38406582_38408961_38409003
ES.13721.6	chr16	+	1790	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2939	35	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	313.061670242462	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGGCTCTGGAGTG	4131	False	NA	20	True	AGTAAA	-11	NA	38376120	38411743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376146_38384476_38384664_38393421_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.60	chr16	+	6519	2	FSM	ENSMUSG00000002845.15	ENSMUST00000165140.2	660	2	-5783	-76	147	36	multi-exon	FALSE	canonical	1	310	junction_1	0	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGGCTCTGGAGTGA	6098	False	NA	21	True	AGTAAA	-12	NA	38402617	38411744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38408666_38411273
ES.13721.62	chr16	+	1421	2	NNC	ENSMUSG00000002845.15	novel	660	2	NA	NA	57	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	0	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGATGATGTTATCTT	3658	False	NA	2	True	ATTAAA	-10	NA	38407629	38411660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38408664_38411273
ES.13721.7	chr16	+	1615	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-2887	37	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	296.035233333804	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCTCTGGAGTGAC	4183	False	NA	22	True	AGTAAA	-13	NA	38376172	38411745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38376219_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ES.13721.8	chr16	+	191	1	Intergenic	novelGene_11522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAGTAGAA	4918	False	NA	NA	False	NA	NA	NA	38376907	38377098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38376900_38377100
ES.13721.9	chr16	+	3632	9	NNC	ENSMUSG00000002845.15	novel	578	4	NA	NA	-1242	955	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	252.659572102464	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGACTGAGATGATTT	5828	False	NA	NA	False	NA	NA	NA	38377817	38413479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38377943_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ES.13722.1	chr16	-	4293	4	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10105	4299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.4663538869077	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTATCTAATTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	38228051	38212179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216120_38217700_38217866_38225898_38225989_38227953
ES.13722.10	chr16	-	1818	12	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	-10319	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	86.7696675492742	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38263826	38216482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38259228_38259330_38263737
ES.13722.11	chr16	-	4277	11	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	212	-4	intron_retention	FALSE	canonical	0	0	junction_9	87.716817087717	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38253295	38216482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221233_38221347_38225898_38225989_38227953_38228122_38229956_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38242934_38243049_38253165
ES.13722.12	chr16	-	1699	4	NIC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10080	-10	intron_retention	FALSE	canonical	3	158	junction_1	29.1699998095456	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGAATCATTTTGGT	NA	False	NA	-13	True	AATAAA	-10	NA	38228076	38216488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38217866_38221237_38221347_38225898_38225989_38227953
ES.13722.13	chr16	-	3941	1	Intergenic	novelGene_11517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACTAGTGTCCTGGATT	NA	False	NA	NA	False	AATATA	-18	NA	38251291	38247350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38247400_38251300
ES.13722.14	chr16	-	2929	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	40	-3	19	3	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGGAGACCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38273025	38264388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.15	chr16	-	2769	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	49	148	28	-148	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATTTTTTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	38273016	38264539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.16	chr16	-	2045	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	17	904	-4	-904	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGGACTTTTGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	38273048	38265295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.17	chr16	-	1675	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	79	1212	58	-1212	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGTGTAGTCTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	38272986	38265603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.18	chr16	-	1601	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	-5	1370	-5	-1370	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGACTTTTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	38273070	38265761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.19	chr16	-	6121	2	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	39	1371	18	-1371	intron_retention	FALSE	canonical	3	1336	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGACTTTTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	38273026	38265762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38266467_38267609
ES.13722.2	chr16	-	1821	12	Fusion	ENSMUSG00000002844.10_ENSMUSG00000002847.8	novel	1974	11	NA	NA	7416	-1	multi-exon	FALSE	canonical	0	0	junction_11	86.7696675492742	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTTGGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	38265628	38216479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38259228_38259330_38265539
ES.13722.20	chr16	-	3599	3	ISM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	40	1372	19	-1372	intron_retention	FALSE	canonical	3	1151	junction_2	92.5	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	38273025	38265763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38266467_38267609_38267971_38270490
ES.13722.21	chr16	-	2430	4	NNC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	735	-1378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	591.036941879834	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTGTCTGACTTT	NA	False	NA	NA	False	NA	NA	NA	38272309	38265769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38266467_38267609_38267971_38270490_38270846_38271292
ES.13722.22	chr16	-	1393	4	NNC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	26	-1378	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	591.036941879834	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTGTCTGACTTT	NA	False	NA	NA	False	NA	NA	NA	38273018	38265769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38266467_38267609_38267971_38270490_38270681_38272873
ES.13722.23	chr16	-	1152	3	NNC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	3546	-1379	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	664	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGCTTTGTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	38269498	38265770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38266467_38267609_38267971_38269403
ES.13722.24	chr16	-	1700	4	NNC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	25	-1379	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	590.101874443915	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGCTTTGTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	38273019	38265770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38266467_38267609_38267971_38270490_38271005_38272890
ES.13722.25	chr16	-	1399	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	40	1527	19	-1527	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGCCTTTCCACATTT	NA	False	NA	NA	False	NA	NA	NA	38273025	38265918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.26	chr16	-	1274	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	40	1652	19	1570	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTTTCTGGCGGTTT	NA	False	NA	NA	False	NA	NA	NA	38273025	38266043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ES.13722.3	chr16	-	1554	10	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	2056	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	86.1821212589442	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTTGGTTGTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	38236100	38216480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38235974
ES.13722.4	chr16	-	1820	11	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	-10420	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.2949597628638	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTTGGTTGTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	38263927	38216480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38263737
ES.13722.5	chr16	-	1289	9	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	2792	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	87.9636821364363	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTTGGTTGTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	38235364	38216480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235325
ES.13722.7	chr16	-	1770	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	202	2	202	-2	multi-exon	FALSE	canonical	2	3	junction_9	86.6256313108309	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTTGGTTGTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	38253305	38216480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
ES.13722.9	chr16	-	921	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10069	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.8197187416744	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCATTTTGGTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	38228087	38216482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38216898_38217700_38217866_38221237_38221355_38225898_38225989_38227953
ES.13723.1	chr16	-	5033	1	Antisense	novelGene_ENSMUSG00000075122.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATAGGTAAATAGATGG	NA	False	NA	NA	False	NA	NA	NA	38303797	38298764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_38298800_38303800
ES.13724.1	chr16	-	3651	8	NNC	ENSMUSG00000002846.10	novel	1573	7	NA	NA	7	2284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.9346701665113	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCCCCGCCCTCCTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	38342996	38316424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38317868_38318044_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ES.13724.10	chr16	-	1307	7	NNC	ENSMUSG00000002846.10	novel	1573	7	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.0991761036107	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTAAATTGTGTTG	NA	False	NA	-28	True	AGTAAA	-10	NA	38343030	38318720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342961
ES.13724.100	chr16	-	3127	10	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	16	264	16	-261	intron_retention	FALSE	canonical	3	921	junction_4	40.8985495833861	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTTGCTTGCTCCAGTGG	6246	False	NA	0	True	ACTAAA	-19	NA	38370604	38345762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.101	chr16	-	2435	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	59	264	23	-261	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTTGCTTGCTCCAGTGG	6289	False	NA	0	True	ACTAAA	-19	NA	38370561	38345762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.102	chr16	-	5956	9	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	31	-263	intron_retention	FALSE	canonical	3	945	junction_6	34.4083928715074	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTTGCTTGCTCCAGT	6297	False	NA	-2	True	ACTAAA	-17	NA	38370553	38345764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.103	chr16	-	2619	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	40	263	40	-263	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTTGCTTGCTCCAGT	6306	False	NA	-2	True	ACTAAA	-17	NA	38370544	38345764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.104	chr16	-	2471	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-8	-263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	299.953346372398	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTTGCTTGCTCCAGT	6258	False	NA	-2	True	ACTAAA	-17	NA	38370592	38345764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369803_38370444
ES.13724.105	chr16	-	1802	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	47	909	11	-906	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGATTTCAGATTCC	6277	False	NA	NA	False	NA	NA	NA	38370573	38346407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.106	chr16	-	5166	9	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-2	-1086	intron_retention	FALSE	canonical	3	945	junction_6	34.4083928715074	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGATTCTGTTGCTTT	6264	False	NA	NA	False	AATACA	-23	NA	38370586	38346587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.107	chr16	-	2384	10	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-14	-1091	intron_retention	FALSE	canonical	3	10	junction_4	312.891808698498	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGTTTGATTCTGTT	6252	False	NA	NA	False	AATACA	-18	NA	38370598	38346592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.108	chr16	-	2017	10	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	-8	1708	-8	-1708	5prime_fragment	FALSE	canonical	3	209	junction_9	249.407049906794	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGATAAAGTACTCAACC	6258	False	NA	NA	False	NA	NA	NA	38370592	38347209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.109	chr16	-	2833	8	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	23	3118	23	1204	intron_retention	FALSE	canonical	3	921	junction_2	45.3174742167716	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTATCTTTACCTTTTT	6289	False	NA	NA	False	AATAAA	-17	NA	38370561	38348619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.11	chr16	-	1254	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	25	294	3	-294	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTCCGATCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	38343000	38319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ES.13724.110	chr16	-	1889	7	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	37	8491	1	471	5prime_fragment	FALSE	canonical	3	749	junction_6	99.483108560644	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCACTGTGTATCTG	6267	False	NA	NA	False	AAGAAA	-19	NA	38370583	38353989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.111	chr16	-	1494	7	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	47	8876	11	86	5prime_fragment	FALSE	canonical	3	749	junction_6	99.483108560644	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCATTTTATAGGAT	6277	False	NA	NA	False	NA	NA	NA	38370573	38354374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.12	chr16	-	1962	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	17	-306	multi-exon	FALSE	canonical	1	10	junction_6	377.053170432677	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCACCACATGGCTTC	6283	False	NA	NA	False	NA	NA	NA	38370567	38319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338853_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.13	chr16	-	2029	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	-8	-306	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	968	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCACCACATGGCTTC	6258	False	NA	NA	False	NA	NA	NA	38370592	38319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.14	chr16	-	2238	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	-4901	-306	multi-exon	FALSE	canonical	0	0	junction_15	406.15019662955	970	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCACCACATGGCTTC	1329	False	NA	NA	False	NA	NA	NA	38375521	38319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38375367
ES.13724.15	chr16	-	5778	18	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	2922	11	NA	NA	32	-306	multi-exon	FALSE	non_canonical	0	0	junction_6	409.276769495219	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCACCACATGGCTTC	6298	False	NA	NA	False	NA	NA	NA	38370552	38319014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38343027_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.16	chr16	-	816	3	NNC	ENSMUSG00000002846.10	novel	678	3	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAGTATTTAATATTT	NA	False	NA	0	True	ATTAAA	-23	NA	38343029	38337017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38337326_38338728_38338895_38342687
ES.13724.17	chr16	-	2910	11	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	996	3	NA	NA	40	0	intron_retention	FALSE	canonical	3	59	junction_1	283.909510231693	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTTTAGTATTTAAT	6306	False	NA	-4	True	ATTAAA	-19	NA	38370544	38337021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.18	chr16	-	410	3	NNC	ENSMUSG00000002846.10	novel	678	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTTTAGTATTTAAT	NA	False	NA	-4	True	ATTAAA	-19	NA	38343038	38337021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38337233_38338728_38338895_38343005
ES.13724.19	chr16	-	1530	12	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	678	3	NA	NA	17	0	multi-exon	FALSE	canonical	3	24	junction_1	364.732529645791	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTTTAGTATTTAAT	6283	False	NA	-4	True	ATTAAA	-19	NA	38370567	38337021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38337326_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.2	chr16	-	4264	17	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	31	2145	multi-exon	FALSE	non_canonical	0	0	junction_1	394.507683702105	969	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAACGCTTATCAAATG	6297	False	NA	NA	False	AATAAA	-22	NA	38370553	38316563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38317868_38318044_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.20	chr16	-	674	3	FSM	ENSMUSG00000002846.10	ENSMUST00000147543.2	678	3	3	1	3	-1	multi-exon	FALSE	canonical	3	26	junction_1	91	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAATTTTAGTATTTAA	NA	False	NA	-5	True	ATTAAA	-18	NA	38343000	38337022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38337233_38338728_38338895_38342702
ES.13724.21	chr16	-	1380	12	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	678	3	NA	NA	72	-2	multi-exon	FALSE	canonical	3	26	junction_1	364.347441120752	963	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAATTTTAGTATTTA	6338	False	NA	-6	True	ATTAAA	-17	NA	38370512	38337023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38337233_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.22	chr16	-	1813	2	Genic_Genomic	ENSMUSG00000002846.10	novel	1573	7	NA	NA	-41	-4189	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCAGGCTTTTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	38343066	38341210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_38341337_38341379
ES.13724.23	chr16	-	6083	12	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	2758	11	NA	NA	16	3871	multi-exon	FALSE	non_canonical	0	0	junction_1	288.946075783603	956	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACTTGTATTTAATAAT	6246	False	NA	NA	False	AATAAA	-18	NA	38370604	38341627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.24	chr16	-	5893	12	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	2758	11	NA	NA	32	3733	multi-exon	FALSE	non_canonical	0	0	junction_1	288.946075783603	956	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCATTACTTTCACCTG	6298	False	NA	NA	False	AATAAA	-24	NA	38370552	38341765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.25	chr16	-	4625	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	75	-1942	39	1942	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGCCTTCTCGGAGC	6305	False	NA	NA	False	ATTAAA	-13	NA	38370545	38343556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.26	chr16	-	4835	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	32	-1945	32	1942	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGCCTTCTCGGAGC	6298	False	NA	NA	False	ATTAAA	-13	NA	38370552	38343556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.28	chr16	-	4126	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	6	1940	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.946075783603	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTTTTGCCTTCTCGGA	6272	False	NA	NA	False	ATTAAA	-11	NA	38370578	38343558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.29	chr16	-	4153	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	40	1939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	380.070915522941	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTTTTGCCTTCTCGG	6306	False	NA	NA	False	ATTAAA	-10	NA	38370544	38343559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.3	chr16	-	2070	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	5	-502	5	502	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTGCTCAGTTTTAA	NA	False	NA	-2	True	ATTAAA	-18	NA	38343020	38318206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ES.13724.30	chr16	-	4209	12	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	40	1854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	346.957377047388	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACCTTGGTAAACAAGT	6306	False	NA	NA	False	ACTAAA	-24	NA	38370544	38343644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.31	chr16	-	3698	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	11	1517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.946075783603	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGCTTCAGTCCTCTT	6277	False	NA	NA	False	NA	NA	NA	38370573	38343981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.32	chr16	-	3244	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	22	1074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.946075783603	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCCTGTCCTCATTC	6288	False	NA	NA	False	NA	NA	NA	38370562	38344424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.33	chr16	-	3462	12	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	5	1072	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	346.957377047388	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTGCCCTGTCCTCAT	6271	False	NA	NA	False	NA	NA	NA	38370579	38344426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.34	chr16	-	2889	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	16	-147	16	147	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGGTTTGATGAGCA	6246	False	NA	69	True	NA	NA	NA	38370604	38345351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.35	chr16	-	3930	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-6236	83	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	298.466011465292	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTGAGCCTGGAAAA	NA	False	NA	5	True	AATATA	-30	NA	38376856	38345415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38375591
ES.13724.37	chr16	-	3646	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	30	75	intron_retention	FALSE	canonical	0	0	junction_3	396.992493631807	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTACTTGGTGAGC	6296	False	NA	-3	True	AATATA	-22	NA	38370554	38345423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38350560_38350791_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.38	chr16	-	3268	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-5379	75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	299.655869290091	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTACTTGGTGAGC	851	False	NA	-3	True	AATATA	-22	NA	38375999	38345423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38375591
ES.13724.4	chr16	-	2826	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	1	500	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	969	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCAGTTGCTCAGTTTT	6267	False	NA	-4	True	ATTAAA	-16	NA	38370583	38318208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.40	chr16	-	3234	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	128	75	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	296.383957055708	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTACTTGGTGAGC	6394	False	NA	-3	True	AATATA	-22	NA	38370456	38345423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370082
ES.13724.41	chr16	-	3017	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	-18	-77	-18	74	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTACTTGGTGAG	6248	False	NA	-4	True	AATATA	-21	NA	38370602	38345424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.42	chr16	-	6348	9	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	15	74	intron_retention	FALSE	canonical	3	945	junction_6	34.4083928715074	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTACTTGGTGAG	6245	False	NA	-4	True	AATATA	-21	NA	38370605	38345424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.43	chr16	-	3147	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	61	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	362.643199302014	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTACTTGGTGAG	6327	False	NA	-4	True	AATATA	-21	NA	38370523	38345424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354877_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.44	chr16	-	3083	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-5175	73	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	297.87111306738	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTTGTACTTGGTGA	1055	False	NA	-5	True	AATATA	-20	NA	38375795	38345425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38375367
ES.13724.45	chr16	-	3034	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	22	69	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	359.259015196557	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAGAGTTGTACTTG	6288	False	NA	-9	True	AATATA	-16	NA	38370562	38345429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.46	chr16	-	2730	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-14	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	302.26413945422	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAGAGTTGTACTTG	6252	False	NA	-9	True	AATATA	-16	NA	38370598	38345429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366185_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.48	chr16	-	2023	5	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-2127	63	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	435.201390163221	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	NA	False	NA	-15	True	AATATA	-10	NA	38354983	38345435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354952
ES.13724.49	chr16	-	2363	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	11	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.896061788784	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	6277	False	NA	-15	True	AATATA	-10	NA	38370573	38345435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38346733_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.5	chr16	-	1597	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	-4	-20	-4	20	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCCTCAGTCTTTGA	NA	False	NA	4	True	AGTAAA	-42	NA	38343029	38318688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ES.13724.50	chr16	-	2784	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	8	63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	299.953346372398	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	6274	False	NA	-15	True	AATATA	-10	NA	38370576	38345435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369803_38370444
ES.13724.51	chr16	-	2848	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	30	63	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	299.843442482906	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTTGTAAGAGTTG	6296	False	NA	-15	True	AATATA	-10	NA	38370554	38345435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.52	chr16	-	2754	10	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	32	62	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	414.476376488053	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTTTTGTAAGAGTT	6298	False	NA	-16	True	AATATA	-9	NA	38370552	38345436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38370444
ES.13724.53	chr16	-	2691	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	299.953346372398	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6289	False	NA	-1	True	NA	NA	NA	38370561	38345498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369788_38370444
ES.13724.54	chr16	-	7003	8	NIC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	945	junction_6	32.9935058545076	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6277	False	NA	-1	True	NA	NA	NA	38370573	38345498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799
ES.13724.55	chr16	-	5595	10	NIC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	749	junction_9	85.364577613382	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6275	False	NA	-1	True	NA	NA	NA	38370575	38345498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.56	chr16	-	3008	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	360.384364255721	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6276	False	NA	-1	True	NA	NA	NA	38370574	38345498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.58	chr16	-	2779	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	-22	1	-22	-1	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGGCTCCTCATTTAC	6208	False	NA	-2	True	NA	NA	NA	38370642	38345499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.59	chr16	-	2704	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	287.761081454737	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGGCTCCTCATTTA	6245	False	NA	-3	True	NA	NA	NA	38370605	38345500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369759_38370444
ES.13724.6	chr16	-	3258	17	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	2758	11	NA	NA	31	14	multi-exon	FALSE	canonical	0	0	junction_6	374.455724811025	969	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCTAATCATGCCTCAGT	6297	False	NA	-2	True	AGTAAA	-36	NA	38370553	38318694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38346195_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.60	chr16	-	3430	8	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	3253	-1	3253	1	3prime_fragment	FALSE	canonical	3	921	junction_4	44.4673693709838	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGGCTCCTCATTTA	9519	False	NA	-3	True	NA	NA	NA	38367331	38345500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110
ES.13724.63	chr16	-	2723	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	299.348308831034	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGGCTCCTCATTTA	6286	False	NA	-3	True	NA	NA	NA	38370564	38345500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38348019_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.65	chr16	-	2272	8	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-5035	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	353.963563211855	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	1195	False	NA	-4	True	NA	NA	NA	38375655	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38375591
ES.13724.66	chr16	-	4109	9	ISM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	20	0	20	0	intron_retention	FALSE	canonical	3	921	junction_4	41.746070174329	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6286	False	NA	-4	True	NA	NA	NA	38370564	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799
ES.13724.67	chr16	-	2637	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.946075783603	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6286	False	NA	-4	True	NA	NA	NA	38370564	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38346765_38346826_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.69	chr16	-	2746	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	398.304920883486	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6308	False	NA	-4	True	NA	NA	NA	38370542	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369803_38370444
ES.13724.7	chr16	-	2322	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	17	12	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	969	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGCCTAATCATGCCTCA	6283	False	NA	-4	True	AGTAAA	-34	NA	38370567	38318696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.70	chr16	-	5797	10	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	209	junction_9	250.773027080488	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6273	False	NA	-4	True	NA	NA	NA	38370577	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.71	chr16	-	3132	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.896061788784	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6271	False	NA	-4	True	NA	NA	NA	38370579	38345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347562_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.72	chr16	-	2630	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	219	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	299.953346372398	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCATTGGCTCCTCATT	6485	False	NA	-5	True	NA	NA	NA	38370365	38345502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369759_38370276
ES.13724.73	chr16	-	1903	12	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.946075783603	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	6271	False	NA	-9	True	NA	NA	NA	38370579	38345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38346167_38346972_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.74	chr16	-	2654	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	299.953346372398	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	6297	False	NA	-9	True	NA	NA	NA	38370553	38345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369767_38370444
ES.13724.75	chr16	-	2745	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	298.399463806489	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	6297	False	NA	-9	True	NA	NA	NA	38370553	38345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.76	chr16	-	2836	10	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	21	-5	combination_of_known_splicesites	FALSE	canonical	1	18	junction_5	362.784294649651	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	6287	False	NA	-9	True	NA	NA	NA	38370563	38345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.77	chr16	-	3404	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-5374	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	299.953346372398	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	856	False	NA	-9	True	NA	NA	NA	38375994	38345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38375367
ES.13724.8	chr16	-	4407	18	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	2758	11	NA	NA	31	-8	multi-exon	FALSE	non_canonical	0	0	junction_6	397.455139902976	969	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAATTGTGTTGTCTG	6297	False	NA	-24	True	AGTAAA	-14	NA	38370553	38318716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338853_38344452_38344603_38345132_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.80	chr16	-	2987	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	255	-42	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	296.383957055708	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTTCTGTTATCATT	6521	False	NA	-6	True	NA	NA	NA	38370329	38345543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370082
ES.13724.81	chr16	-	6471	9	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	31	-63	intron_retention	FALSE	canonical	3	209	junction_8	265.383655063759	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTATGGTCACACTT	6297	False	NA	-27	True	NA	NA	NA	38370553	38345564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38369999_38370444
ES.13724.82	chr16	-	2837	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	-8	93	-8	-93	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATGTCAAGTGTGTG	6258	False	NA	45	True	NA	NA	NA	38370592	38345594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.84	chr16	-	2625	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	-9	142	-9	-139	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGCCTGTGTACCTCA	6221	False	NA	-1	True	TTTAAA	-25	NA	38370629	38345640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.85	chr16	-	2601	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-22	-139	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	287.761081454737	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGCCTGTGTACCTCA	6208	False	NA	-1	True	TTTAAA	-25	NA	38370642	38345640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369759_38370444
ES.13724.86	chr16	-	2607	10	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	40	-139	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	376.913324679544	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGCCTGTGTACCTCA	6306	False	NA	-1	True	TTTAAA	-25	NA	38370544	38345640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38368799_38368944_38369704_38369999_38370444
ES.13724.87	chr16	-	2610	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	31	-140	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	298.399463806489	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGCCTGTGTACCTC	6297	False	NA	-2	True	TTTAAA	-24	NA	38370553	38345641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.88	chr16	-	3312	10	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	8	-141	intron_retention	FALSE	canonical	3	10	junction_4	312.891808698498	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGCCTGTGTACCT	6274	False	NA	-3	True	TTTAAA	-23	NA	38370576	38345642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.89	chr16	-	6178	9	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	-33	-141	intron_retention	FALSE	canonical	3	945	junction_6	34.4083928715074	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGCCTGTGTACCT	6197	False	NA	-3	True	TTTAAA	-23	NA	38370653	38345642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13724.9	chr16	-	2526	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	-8	-12	multi-exon	FALSE	canonical	3	59	junction_6	387.8436913099	969	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTAAATTGTGTTG	6258	False	NA	-28	True	AGTAAA	-10	NA	38370592	38318720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ES.13724.91	chr16	-	5420	10	NIC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	40	-141	intron_retention	FALSE	canonical	3	749	junction_9	85.364577613382	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGCCTGTGTACCT	6306	False	NA	-3	True	TTTAAA	-23	NA	38370544	38345642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ES.13724.92	chr16	-	2881	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	260	-143	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	296.383957055708	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTCTTGCCTGTGTAC	6526	False	NA	-5	True	TTTAAA	-21	NA	38370324	38345644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370082
ES.13724.95	chr16	-	2711	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	211	-146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	299.953346372398	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGACTCTTGCCTGTG	6477	False	NA	-8	True	TTTAAA	-18	NA	38370373	38345647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370298
ES.13724.96	chr16	-	2873	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-5191	-150	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	297.87111306738	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGCTCTGACTCTTGCC	1039	False	NA	-12	True	TTTAAA	-14	NA	38375811	38345651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38375367
ES.13724.97	chr16	-	2857	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	-5402	-153	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	298.466011465292	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCGGCTCTGACTCTT	828	False	NA	-15	True	TTTAAA	-11	NA	38376022	38345654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38375591
ES.13724.99	chr16	-	3296	10	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	40	-166	intron_retention	FALSE	canonical	1	3	junction_4	315.079923233283	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAACAAAAGTTACTC	6306	False	NA	-28	True	NA	NA	NA	38370544	38345667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354952_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704
ES.13725.1	chr16	-	177	1	Intergenic	novelGene_11523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTATTTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	38413812	38413635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38413600_38413800
ES.13726.1	chr16	-	6864	7	ISM	ENSMUSG00000022799.5	ENSMUST00000023487.5	7964	12	89277	3	88901	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTTGGGTGTTGAGAA	8334	False	NA	NA	False	AATAAA	-13	NA	38444359	38418704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_38424178_38426963_38427242_38429264_38429814_38431118_38431182_38438504_38438630_38441264_38441455_38444173
ES.13726.2	chr16	-	151	1	Intergenic	novelGene_11524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATAATT	6171	False	NA	NA	False	NA	NA	NA	38442261	38442110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38442100_38442300
ES.13727.1	chr16	+	2121	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	-18	201	-18	0	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3894	False	NA	7	True	AGTAAA	-17	NA	38562607	38589210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ES.13727.2	chr16	+	1986	6	NIC	ENSMUSG00000022793.18	novel	2009	7	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	10.1390334845093	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3906	False	NA	7	True	AGTAAA	-17	NA	38562619	38589210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38586276_38586382_38588259
ES.13727.3	chr16	+	2300	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	4	0	2	0	multi-exon	FALSE	canonical	3	15	junction_1	6.0184900284226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTACTGCTTTTGCAG	3916	False	NA	NA	False	NA	NA	NA	38562629	38589411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ES.13727.4	chr16	+	2037	7	FSM	ENSMUSG00000022793.18	ENSMUST00000154902.2	2009	7	-28	0	2	0	multi-exon	FALSE	canonical	2	4	junction_5	9.26312882106017	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3916	False	NA	7	True	AGTAAA	-17	NA	38562629	38589210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583492_38586276_38586382_38588259
ES.13727.5	chr16	+	7293	6	NIC	ENSMUSG00000022793.18	novel	2304	7	NA	NA	8	-2	intron_retention	FALSE	canonical	3	15	junction_1	6.24179461373089	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTCTTGGTCTTGTTTT	3922	False	NA	5	True	AGTAAA	-15	NA	38562635	38589208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38583554_38586276_38586382_38588259
ES.13728.1	chr16	-	174	1	Intergenic	novelGene_11525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTGAAGATATCT	NA	False	NA	NA	False	NA	NA	NA	38651320	38651146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_38651100_38651300
ES.13729.1	chr16	+	630	5	NNC	ENSMUSG00000086175.3	novel	1094	6	NA	NA	20826	23257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATCTGTTATTT	8383	False	NA	NA	False	NA	NA	NA	38670095	38672863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_38670132_38670256_38670350_38670704_38670803_38672345_38672418_38672532
ES.1373.1	chr1	-	4302	1	FSM	ENSMUSG00000026463.18	ENSMUST00000167348.2	243	1	-1879	-2180	-1879	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCCTTAGCTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	133631498	133627196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133627200_133631500
ES.1373.10	chr1	-	6200	20	FSM	ENSMUSG00000026463.18	ENSMUST00000165602.9	8101	20	253	1648	187	-1648	multi-exon	FALSE	canonical	3	10	junction_19	4.16554924998092	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAAGTTCAAGTGTTT	8875	False	NA	NA	False	TATAAA	-17	NA	133681232	133632059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ES.1373.11	chr1	-	4211	19	NIC	ENSMUSG00000026463.18	novel	8101	20	NA	NA	187	36	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	4.97555754056831	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTTTTTTCCTATTTT	8875	False	NA	NA	False	NA	NA	NA	133681232	133634012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ES.1373.12	chr1	-	2630	1	NIC	ENSMUSG00000026463.18	novel	11725	21	NA	NA	-2930	-1907	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	6567	False	NA	NA	False	NA	NA	NA	133648597	133645967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133646000_133648600
ES.1373.13	chr1	-	179	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2144	False	NA	NA	False	NA	NA	NA	133659249	133659070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133659100_133659200
ES.1373.2	chr1	-	8011	21	FSM	ENSMUSG00000026463.18	ENSMUST00000125659.8	4579	21	206	-3638	-194	1	multi-exon	FALSE	canonical	1	3	junction_1	5.8172158288996	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTCTGGGTCTGCATGT	8894	False	NA	0	True	AATAAA	-25	NA	133681213	133630410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133634735_133639379_133639561_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ES.1373.3	chr1	-	8513	21	FSM	ENSMUSG00000026463.18	ENSMUST00000143567.8	11725	21	-7	3219	-7	-2	multi-exon	FALSE	canonical	2	6	junction_20	5.11346262331114	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATCGTCTGGGTCTGCA	9202	False	NA	-3	True	AATAAA	-22	NA	133728786	133630413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826_133681488_133728374
ES.1373.4	chr1	-	6831	15	NNC	ENSMUSG00000026463.18	novel	8101	20	NA	NA	16885	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.2792174216674	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTATCGTCTGGGTCTG	6320	False	NA	-5	True	AATAAA	-20	NA	133664134	133630415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133663994
ES.1373.5	chr1	-	8196	20	NIC	ENSMUSG00000026463.18	novel	11725	21	NA	NA	265	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	5.67835956179418	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTATCGTCTGGGTC	9479	False	NA	-7	True	AATAAA	-18	NA	133728509	133630417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826_133681488_133728374
ES.1373.6	chr1	-	8027	21	FSM	ENSMUSG00000026463.18	ENSMUST00000048953.14	8292	21	258	7	192	-7	multi-exon	FALSE	canonical	3	6	junction_1	5.43943930934062	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCTATCGTCTGGGT	8880	False	NA	-8	True	AATAAA	-17	NA	133681227	133630418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_133634735_133639369_133639561_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ES.1373.7	chr1	-	7738	21	NNC	ENSMUSG00000026463.18	novel	11725	21	NA	NA	190	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.99895824289518	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTGCTATCGTCTGGG	8878	False	NA	-9	True	AATAAA	-16	NA	133681229	133630419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657541_133657639_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ES.1373.8	chr1	-	5550	9	NNC	ENSMUSG00000026463.18	novel	8101	20	NA	NA	-10954	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.68826215734089	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGCCATGCACTGAGAA	4772	False	NA	-2	True	AATAAA	-23	NA	133656621	133630458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646636_133647056_133647254_133654194_133654302_133655460_133655549_133656434
ES.13730.1	chr16	+	3437	7	FSM	ENSMUSG00000022790.15	ENSMUST00000023478.8	3443	7	6	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTCATTAATTGTCA	9723	False	NA	NA	False	AATAAA	-18	NA	38722683	38847521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_38722922_38827495_38827660_38829146_38829355_38831578_38831735_38842727_38842851_38843591_38843743_38845124
ES.13730.2	chr16	+	178	1	Intergenic	novelGene_11526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGACGCTA	NA	False	NA	NA	False	NA	NA	NA	38753030	38753208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_38753000_38753200
ES.13731.1	chr16	+	3130	4	Intergenic	novelGene_11527	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAATATACCAATAGTT	NA	False	NA	NA	False	NA	NA	NA	39463346	39474789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39463484_39466698_39466893_39468420_39468579_39472148
ES.13731.2	chr16	+	4541	6	Intergenic	novelGene_11528	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAATGTGACTGCTT	NA	False	NA	NA	False	AATAAA	-9	NA	39463377	39476601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39463484_39466698_39466893_39468420_39468579_39472148_39474938_39475259_39475310_39475357
ES.13731.3	chr16	+	4336	6	Intergenic	novelGene_11529	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGCTTTCTCTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	39463378	39476610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39463484_39466795_39466893_39468420_39468579_39472148_39474938_39475259_39475308_39475471
ES.13731.4	chr16	+	2729	1	Intergenic	novelGene_11530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	39472042	39474771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39472000_39474800
ES.13731.5	chr16	+	4095	3	Intergenic	novelGene_11531	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGCTTTCTCTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	39472145	39476610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39474938_39475259_39475310_39475357
ES.13732.1	chr16	+	207	1	Intergenic	novelGene_11532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTTTATATTTTCA	NA	False	NA	NA	False	NA	NA	NA	39497067	39497274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_39497100_39497300
ES.13733.1	chr16	-	191	1	Intergenic	novelGene_11533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGGATGCAGAATATATA	NA	False	NA	NA	False	NA	NA	NA	40067174	40066983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_40067000_40067200
ES.13734.1	chr16	-	1252	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	107	61	107	-45	multi-exon	FALSE	canonical	2	3	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAAGGCTGTGAGGCTC	NA	False	NA	-59	True	AATAAA	-29	NA	42160907	42068865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_42069478_42112161_42112730_42160835
ES.13735.1	chr16	+	2777	11	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	-55	-255	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.83838816136118	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAAAGCTATGGCACTA	NA	False	NA	NA	False	NA	NA	NA	42696188	43439177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43053121_43053184_43122931_43122979_43283309_43283350_43390043_43390145_43397923_43398112_43429689_43431295_43438685
ES.13735.10	chr16	+	3161	14	NNC	ENSMUSG00000022708.17	novel	563	8	NA	NA	16	-205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.77914602061817	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGTTTTTGTTTCTG	NA	False	NA	NA	False	AAGAAA	-19	NA	42696259	43439227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43404022_43404194_43429689_43431295_43438685
ES.13735.11	chr16	+	4275	8	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	16	3338	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.3946307395712	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGAATACTGTACTTAA	NA	False	NA	NA	False	TATAAA	-17	NA	42696259	43433463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42967259_42967307_43122931_43122979_43283309_43283350_43390043_43390145_43397923_43398112_43429689
ES.13735.12	chr16	+	3922	12	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	18	834	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.82589434181345	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTCTCCTTTTGGT	NA	False	NA	NA	False	AAAAAG	-17	NA	42696261	43440334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42734858_42734908_42845300_42845351_42967259_42967307_43053121_43053184_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397923_43398112_43429689_43431295_43438685
ES.13735.13	chr16	+	2723	11	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	19	-247	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.95580467734555	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGGCACTAGAATTTAA	NA	False	NA	NA	False	NA	NA	NA	42696262	43439185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43397923_43398112_43429689_43431295_43438685
ES.13735.14	chr16	+	3716	12	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	19	620	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.81389174359045	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	42696262	43440120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397923_43398112_43429689_43431295_43438685
ES.13735.15	chr16	+	1776	10	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	19	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.02768199119819	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAAAGG	NA	False	NA	NA	False	AAAAAG	-36	NA	42696262	43399121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923
ES.13735.16	chr16	+	410	1	Intergenic	novelGene_11534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAGCAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	42770262	42770672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_42770300_42770700
ES.13735.17	chr16	+	501	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	-69	-113	-69	113	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAATGAAC	NA	False	NA	NA	False	AATAAA	-16	NA	42775924	42776425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_42775900_42776400
ES.13735.18	chr16	+	266	1	Intergenic	novelGene_11536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42851209	42851475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_42851200_42851500
ES.13735.19	chr16	+	1697	1	Intergenic	novelGene_11537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTTTGAGTATATGTTC	NA	False	NA	NA	False	NA	NA	NA	42987058	42988755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_42987100_42988800
ES.13735.2	chr16	+	2997	14	NNC	ENSMUSG00000022708.17	novel	563	8	NA	NA	-8	-296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.56381445359733	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACGACAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	42696235	43439136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43121881_43121956_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.20	chr16	+	2910	1	Intergenic	novelGene_11538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAGTCACTTGAAGAT	8430	False	NA	NA	False	AATAAA	-43	NA	43372581	43375491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43372600_43375500
ES.13735.21	chr16	+	1759	1	Intergenic	novelGene_11539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCGGACCCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	43375940	43377699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43375900_43377700
ES.13735.22	chr16	+	866	1	Genic_Genomic	ENSMUSG00000022708.17	novel	NA	NA	NA	NA	67709	131	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCATTAGGAAATGAGAT	NA	False	NA	NA	False	NA	NA	NA	43398379	43399245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_43398400_43399200
ES.13735.3	chr16	+	3846	12	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	-5	621	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.20546672953468	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	42696238	43440121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_43053121_43053184_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.4	chr16	+	3040	12	NIC	ENSMUSG00000022708.17	novel	2759	5	NA	NA	-4	-234	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	5.48175033879321	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGAAATGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	42696239	43439198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_43013827_43013902_43122931_43122979_43283309_43283350_43328521_43328686_43390043_43390145_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.5	chr16	+	6100	13	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	-4	2817	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.14996653266291	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACACCAGATGACTTGAAA	NA	False	NA	NA	False	NA	NA	NA	42696239	43442317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.6	chr16	+	2881	11	NNC	ENSMUSG00000022708.17	novel	563	8	NA	NA	-1	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.97594212184989	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGAAATGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	42696242	43439198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_42696288_42845300_42845351_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397927_43398112_43429689_43431295_43438685
ES.13735.7	chr16	+	2890	12	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	15	-247	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.20546672953468	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGGCACTAGAATTTAA	NA	False	NA	NA	False	NA	NA	NA	42696258	43439185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_43053121_43053184_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.8	chr16	+	2900	13	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	15	-296	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.14996653266291	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACGACAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	42696258	43439136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13735.9	chr16	+	5996	12	NIC	ENSMUSG00000022708.17	novel	563	8	NA	NA	16	2807	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.84836554336668	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGGACACCAGA	NA	False	NA	NA	False	NA	NA	NA	42696259	43442307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_42696288_42845300_42845351_42892786_42892833_42967259_42967307_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ES.13736.1	chr16	-	140	1	Intergenic	novelGene_11535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTCAGTCTCAGAC	NA	False	NA	NA	False	AATAAA	-14	NA	42847619	42847479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_42847500_42847600
ES.13737.1	chr16	-	5209	3	Antisense	novelGene_ENSMUSG00000022708.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAACCCAAACCCAAAAC	2998	False	NA	NA	False	NA	NA	NA	43360066	43348045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43349278_43356015_43356948_43357021
ES.13738.1	chr16	+	6831	1	ISM	ENSMUSG00000022708.17	ENSMUST00000114694.9	26901	15	723586	4534	120930	-4534	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCGTGTTAAAAGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	43451600	43458431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43451600_43458400
ES.13739.1	chr16	+	2759	1	FSM	ENSMUSG00000076372.4	ENSMUST00000102417.4	83	1	-818	-1858	-818	1858	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43460199	43462958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43460200_43463000
ES.1374.1	chr1	-	184	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	133739451	133739267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133739300_133739500
ES.13740.1	chr16	-	220	1	Intergenic	novelGene_11540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTCAGCTTCCCTTC	NA	False	NA	NA	False	NA	NA	NA	43561845	43561625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43561600_43561800
ES.13741.1	chr16	-	7009	1	Intergenic	novelGene_11541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43591577	43584568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43584600_43591600
ES.13741.2	chr16	-	6227	3	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43591577	43584568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43584857_43585545_43590422_43590514
ES.13741.3	chr16	-	6946	2	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	43591577	43584569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43586096_43586157
ES.13741.4	chr16	-	2587	2	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	43591545	43584569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43586883_43591271
ES.13741.5	chr16	-	5501	2	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTTTAAGACCTAAAGA	NA	False	NA	NA	False	NA	NA	NA	43591537	43585943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43590422_43590514
ES.13741.6	chr16	-	671	2	Antisense	novelGene_ENSMUSG00000022705.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGTAATTCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	43591545	43586485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_43586883_43591271
ES.13742.1	chr16	+	166	1	Intergenic	novelGene_11542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAAATGAAGAGACA	NA	False	NA	NA	False	NA	NA	NA	43640404	43640570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43640400_43640600
ES.13743.1	chr16	-	3351	9	NIC	ENSMUSG00000022704.17	novel	1457	9	NA	NA	5	280	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGTAGTTTTTGGGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	43710043	43681489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
ES.13743.10	chr16	-	3039	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	50.755387645057	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710016	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698417_43700661_43700718_43701355_43701577_43709929
ES.13743.11	chr16	-	3361	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.3360714552993	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710017	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691642_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.12	chr16	-	3611	8	NNC	ENSMUSG00000022704.17	novel	1303	8	NA	NA	32	-2	intron_retention	FALSE	canonical	0	0	junction_7	53.4774413626333	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGCTGTGCATTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	43709979	43681771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43701570_43709929
ES.13743.13	chr16	-	3100	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.6876133614235	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGCTGTGCATTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	43710025	43681771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691934_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
ES.13743.14	chr16	-	3390	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.3360714552993	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43710022	43681777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691610_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.15	chr16	-	2718	7	NIC	ENSMUSG00000022704.17	novel	2838	8	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	55.7775841076762	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43710013	43681777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43700661_43700718_43701355_43701577_43709929
ES.13743.18	chr16	-	3361	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	43	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.6876133614235	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43709968	43681777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691610_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
ES.13743.19	chr16	-	3818	9	FSM	ENSMUSG00000022704.17	ENSMUST00000156568.8	3856	9	30	8	30	-8	multi-exon	FALSE	canonical	2	29	junction_3	36.5299534628776	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43709981	43681777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.2	chr16	-	3210	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	52.4541466425677	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710043	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701191_43701577_43709929
ES.13743.20	chr16	-	3792	8	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	2	29	junction_3	45.1075811538484	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCCGCTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	43701577	43681777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330
ES.13743.21	chr16	-	3259	10	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.9383440135684	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAACCCCGCTGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	43710049	43681778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43688709_43688926_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.22	chr16	-	3899	9	NNC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	51.0941227050627	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAACCCCGCTGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	43710043	43681778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698417_43700661_43700718_43701355_43701577_43709929
ES.13743.23	chr16	-	1979	6	ISM	ENSMUSG00000022704.17	ENSMUST00000156568.8	3856	9	-26	9110	11	1156	5prime_fragment	FALSE	canonical	3	95	junction_4	18.1041431722134	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	43710037	43690879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.24	chr16	-	183	1	Intergenic	novelGene_11543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTTCTTAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	43705239	43705056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43705100_43705200
ES.13743.25	chr16	-	3962	1	FSM	ENSMUSG00000119162.1	ENSMUST00000158761.4	133	1	-2856	-973	-2856	973	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTTTGTGTGCGCACAT	NA	False	NA	NA	False	NA	NA	NA	43710033	43706071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43706100_43710000
ES.13743.3	chr16	-	3090	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710062	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
ES.13743.4	chr16	-	3062	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710059	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.6	chr16	-	7013	6	NIC	ENSMUSG00000022704.17	novel	2838	8	NA	NA	19	0	intron_retention	FALSE	canonical	1	31	junction_3	42.5704122601602	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43709992	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43701577_43709929
ES.13743.7	chr16	-	3649	8	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	54.1321135213259	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710017	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ES.13743.8	chr16	-	3166	5	NIC	ENSMUSG00000022704.17	novel	2838	8	NA	NA	3	0	intron_retention	TRUE	canonical	0	0	junction_3	60.3422530238969	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710015	43681769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43700661_43701577_43709929
ES.13744.1	chr16	+	2747	9	NIC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	-26	860	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	29.6329103363136	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGGACCTCCTAATCA	NA	False	NA	NA	False	ATTAAA	-39	NA	43710235	43760790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43710402_43712515_43712555_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
ES.13744.10	chr16	+	3027	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	109	609	10	-609	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACTTACGGAGGGGGC	NA	False	NA	24	True	AATAAA	-24	NA	43710271	43784068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.11	chr16	+	4371	9	NIC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	10	-1463	intron_retention	FALSE	canonical	2	11	junction_1	29.6329103363136	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACCATGTCAGAGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	43710271	43762450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43710402_43712515_43712555_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
ES.13744.12	chr16	+	2980	16	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	15	-618	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	23.1328530209503	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCTGCCTGGACTTAC	NA	False	NA	15	True	AATAAA	-15	NA	43710276	43784059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751589_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.13	chr16	+	3068	17	NIC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	16	-604	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	27.1545777678461	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACGGAGGGGGCGTCCT	NA	False	NA	29	True	AATAAA	-29	NA	43710277	43784073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43762150_43762193_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.14	chr16	+	4293	8	NNC	ENSMUSG00000022701.19	novel	1822	8	NA	NA	16	-1463	intron_retention	FALSE	canonical	2	5	junction_6	26.6496544373966	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACCATGTCAGAGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	43710277	43762450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751589_43751748_43759276
ES.13744.16	chr16	+	7295	16	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	-10	-622	intron_retention	TRUE	non_canonical	0	0	junction_8	24.0456972357958	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGCCTGCCTGGAC	NA	False	NA	11	True	AATAAA	-11	NA	43710292	43784055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43761190_43761227_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.17	chr16	+	3163	18	NNC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	-8	-621	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	31.7269928629325	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGCCTGCCTGGACT	NA	False	NA	12	True	AATAAA	-12	NA	43710294	43784056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43712515_43712555_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43762150_43762193_43763866_43764328_43765001_43765184_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.18	chr16	+	3392	14	NNC	ENSMUSG00000022701.19	novel	2310	10	NA	NA	22817	-621	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	32.3106225777367	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGCCTGCCTGGACT	NA	False	NA	12	True	AATAAA	-12	NA	43733119	43784056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43733246_43733556_43733649_43733710_43733930_43735059_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.19	chr16	+	2090	7	NIC	ENSMUSG00000022701.19	novel	2310	10	NA	NA	4573	-619	intron_retention	FALSE	canonical	1	27	junction_1	22.366269246345	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	2004	False	NA	14	True	AATAAA	-14	NA	43764059	43784058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.2	chr16	+	3256	18	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	-26	-617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.0089840759997	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710235	43784060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43747399_43747512_43748976_43749066_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.20	chr16	+	3316	6	NNC	ENSMUSG00000022701.19	novel	2310	10	NA	NA	5279	-621	intron_retention	FALSE	canonical	0	0	junction_2	34.0470263018667	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGCCTGCCTGGACT	2710	False	NA	12	True	AATAAA	-12	NA	43764765	43784056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43767115_43767789_43767892_43777184_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.21	chr16	+	2008	6	ISM	ENSMUSG00000022701.19	ENSMUST00000122440.2	2310	10	6593	619	6593	-619	3prime_fragment	FALSE	canonical	3	56	junction_1	14.3749782608531	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	4024	False	NA	14	True	AATAAA	-14	NA	43766079	43784058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.3	chr16	+	5559	15	NIC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	-10	-621	intron_retention	FALSE	canonical	1	3	junction_7	28.8876253430285	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGCCTGCCTGGACT	NA	False	NA	12	True	AATAAA	-12	NA	43710251	43784056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43710402_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43762193_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.5	chr16	+	3078	17	NIC	ENSMUSG00000022701.19	novel	3779	17	NA	NA	-10	-617	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	25.4014640326104	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710251	43784060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43710402_43712515_43712555_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.6	chr16	+	3052	16	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	-10	-619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.9938881106557	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGCCTGGACTTA	NA	False	NA	14	True	AATAAA	-14	NA	43710251	43784058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759261_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.7	chr16	+	4350	8	FSM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	-6	-2522	-6	-1461	multi-exon	FALSE	canonical	3	61	junction_7	9.64682458064808	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATGTCAGAGTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	43710255	43762452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
ES.13744.8	chr16	+	3112	16	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	7	-617	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_10	17.6199382014303	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710268	43784060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765184_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13744.9	chr16	+	3003	17	NNC	ENSMUSG00000022701.19	novel	3745	16	NA	NA	9	-617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.9742487611374	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGCCTGGACTTACG	NA	False	NA	16	True	AATAAA	-16	NA	43710270	43784060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759468_43762150_43762193_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ES.13745.1	chr16	-	6191	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	214	844	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGCAGATGATTCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	43799940	43784551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13745.10	chr16	-	5656	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	19.94993734326	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800130	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791921_43793830_43794530_43799270_43799540_43799982
ES.13745.11	chr16	-	5317	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	21.5629311551097	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800179	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791921_43793830_43794141_43794429_43794530_43799270_43799441_43799982
ES.13745.14	chr16	-	5143	4	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.4548930574657	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800146	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43799270_43799540_43799821
ES.13745.16	chr16	-	5547	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	18.004443895883	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800149	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791921_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13745.17	chr16	-	5426	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	18.3303027798234	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800130	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791819_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13745.18	chr16	-	5705	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	10.9857862713599	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800170	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799982
ES.13745.19	chr16	-	5746	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	20.4862758938759	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800161	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791819_43793830_43794530_43799270_43799540_43799821
ES.13745.2	chr16	-	6417	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	11	838	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCTAGCAGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	43800143	43784557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
ES.13745.20	chr16	-	5425	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	16.6300932047899	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800117	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799441_43799821
ES.13745.21	chr16	-	7713	4	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	38	0	intron_retention	FALSE	canonical	3	27	junction_3	12.3648246606609	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800116	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43794530_43799270_43799540_43799821
ES.13745.22	chr16	-	3851	4	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.8859335970941	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800146	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43787546_43793261_43794530_43799270_43799540_43799982
ES.13745.23	chr16	-	5385	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-38	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.3430577839223	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800192	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794580_43799270_43799441_43799982
ES.13745.24	chr16	-	5385	6	NNC	ENSMUSG00000036304.15	novel	1380	4	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	17.8616908494129	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800152	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791921_43793830_43794141_43794429_43794530_43799270_43799540_43799982
ES.13745.26	chr16	-	5602	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800170	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
ES.13745.27	chr16	-	6144	4	NNC	ENSMUSG00000036304.15	novel	1278	4	NA	NA	34	-4	intron_retention	FALSE	canonical	0	0	junction_3	22.6617641757114	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800120	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794580_43799270
ES.13745.28	chr16	-	5017	4	NNC	ENSMUSG00000036304.15	novel	1278	4	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.464787260659	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800185	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43799270_43799540_43799982
ES.13745.29	chr16	-	5533	5	NNC	ENSMUSG00000036304.15	novel	1347	4	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	20.3270140453535	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCTGTGGTTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	43800113	43785399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791819_43793830_43794530_43799270_43799540_43799982
ES.13745.3	chr16	-	6212	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	26	838	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.4995237987254	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCTAGCAGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	43800128	43784557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799982
ES.13745.30	chr16	-	5752	7	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-38	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.2172747402269	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTGTCTGTGGTTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	43800192	43785400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43795950_43796109_43799270_43799540_43799821
ES.13745.31	chr16	-	5750	5	FSM	ENSMUSG00000036304.15	ENSMUST00000231700.2	5751	5	-4	5	-4	-5	multi-exon	FALSE	canonical	3	8	junction_4	18.5067555233217	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTGTCTGTGGTTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	43800158	43785400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799821
ES.13745.32	chr16	-	5461	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-166	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	21.2882009573378	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTGTGGTTGT	NA	False	NA	-7	True	AATAAA	-14	NA	43800320	43785401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43800271
ES.13745.33	chr16	-	5244	4	FSM	ENSMUSG00000036304.15	ENSMUST00000165648.2	1278	4	-736	-3230	5	-883	multi-exon	FALSE	canonical	3	34	junction_2	9.10433352249844	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCGTTGCTTTAAACT	NA	False	NA	NA	False	AATAAA	-17	NA	43800149	43786278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270
ES.13745.34	chr16	-	4609	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	-886	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	24.2937749228069	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTCGTTGCTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	43800170	43786281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791819_43793830_43794530_43799270_43799441_43799982
ES.13745.35	chr16	-	3240	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	15	1450	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCCACTGGGTAAGCCA	NA	False	NA	NA	False	AATAAA	-12	NA	43800139	43787990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
ES.13745.36	chr16	-	7064	2	NIC	ENSMUSG00000036304.15	novel	1380	4	NA	NA	111	1202	intron_retention	FALSE	canonical	3	51	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTGGCCTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	43800043	43788238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43794530_43799270
ES.13745.37	chr16	-	4620	4	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	25	1199	intron_retention	FALSE	canonical	3	5	junction_3	22.6862660362314	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCCTTGGCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	43800129	43788241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43794530_43799270_43799441_43799982
ES.13745.38	chr16	-	2714	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	30	1199	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCCTTGGCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	43800124	43788241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
ES.13745.39	chr16	-	2724	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-9	1199	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCCTTGGCCTTGTT	NA	False	NA	NA	False	NA	NA	NA	43800163	43788241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13745.4	chr16	-	5416	7	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.572365498946	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800117	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43788594_43788692_43789777_43791761_43791921_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13745.40	chr16	-	1852	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-16	-5106	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	10	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTGCTGTTTGACA	NA	False	NA	NA	False	AATAAA	-24	NA	43800170	43794614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43796109_43799270_43799441_43799982
ES.13745.41	chr16	-	2100	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-7	-5109	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTCTGCTGCTGTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	43800161	43794617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43796109_43799270_43799540_43799821
ES.13745.42	chr16	-	1889	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	41	-5111	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	2	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCATTTCTGCTGCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	43800113	43794619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43796109_43799270_43799540_43799982
ES.13745.5	chr16	-	5774	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.6631635298087	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800158	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799420_43799499_43799540_43799821
ES.13745.6	chr16	-	5967	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800271	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
ES.13745.7	chr16	-	5385	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.4995237987254	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800139	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799982
ES.13745.8	chr16	-	5835	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	20.1183995387307	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800148	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791921_43793830_43794530_43799270_43799540_43799821
ES.13745.9	chr16	-	5593	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800186	43785395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
ES.13746.1	chr16	+	203	1	Intergenic	novelGene_11544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	43806987	43807190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43807000_43807200
ES.13747.1	chr16	+	1480	2	Antisense	novelGene_ENSMUSG00000036292.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	43825742	43831308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_43826328_43830413
ES.13748.1	chr16	+	3060	1	Antisense	novelGene_ENSMUSG00000036292.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGTCGCCGCTCCAAT	NA	False	NA	NA	False	ATTAAA	-39	NA	43876410	43879470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_43876400_43879500
ES.13749.1	chr16	-	3806	18	FSM	ENSMUSG00000036292.15	ENSMUST00000214098.2	2046	18	-67	-1693	-67	0	multi-exon	FALSE	canonical	0	0	junction_16	2.1994022465694	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCGTTTTTTCTTCTGT	5902	False	NA	NA	False	AATAAA	-16	NA	43883775	43800717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43802502_43803503_43803610_43803870_43803982_43807284_43807343_43808443_43808621_43810130_43810235_43810985_43811129_43812421_43812541_43818088_43818227_43825822_43825986_43829767_43829901_43833284_43833401_43849041_43849123_43850656_43850753_43851342_43851447_43860436_43860522_43879464_43879612_43883634
ES.1375.1	chr1	-	173	1	Antisense	novelGene_ENSMUSG00000100830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAGTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	133765388	133765215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_133765200_133765400
ES.13750.1	chr16	+	178	1	Intergenic	novelGene_11545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACGTACAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	43884034	43884212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43884000_43884200
ES.13751.1	chr16	-	155	1	Intergenic	novelGene_11546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	43891930	43891775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43891800_43891900
ES.13752.1	chr16	-	185	1	Intergenic	novelGene_11547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	43900349	43900164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43900200_43900300
ES.13753.1	chr16	+	1914	1	Intergenic	novelGene_11548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTTGCCACTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	43948768	43950682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43948800_43950700
ES.13754.1	chr16	+	5105	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-462	-156	-439	156	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTCTCATCTAAATG	NA	False	NA	NA	False	AAGAAA	-12	NA	43959753	43983885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.13	chr16	+	2452	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-47	2082	-24	110	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGACTTGAGTAGTCT	NA	False	NA	NA	False	AAAACA	-44	NA	43960168	43981647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.16	chr16	+	3778	6	FSM	ENSMUSG00000022698.18	ENSMUST00000159514.8	3756	6	-22	0	-22	0	multi-exon	FALSE	canonical	2	5	junction_1	773.749675282646	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43960170	43982837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43965143_43965282_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.19	chr16	+	1135	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-33	3385	-10	-1193	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAGAGCCTACTATAT	NA	False	NA	20	True	AATAAA	-29	NA	43960182	43980344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.2	chr16	+	4089	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-431	829	-408	63	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTGTGTACTGTGAT	NA	False	NA	82	True	NA	NA	NA	43959784	43982900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.20	chr16	+	3346	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-22	1163	1	-269	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTAATTTGTCAAGAT	NA	False	NA	NA	False	AGTAAA	-23	NA	43960193	43982566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.21	chr16	+	3569	6	NNC	ENSMUSG00000022698.18	novel	3756	6	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	621.383488676679	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATCTGTCTGTAACTG	NA	False	NA	18	True	AATAAA	-18	NA	43960199	43982836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825_43981693_43981733
ES.13754.22	chr16	+	3344	3	NNC	ENSMUSG00000022698.18	novel	2136	4	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	2	56	junction_2	451	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTGTAACTGTCAT	NA	False	NA	22	True	AATAAA	-22	NA	43960199	43982840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43976772_43976837_43979835
ES.13754.24	chr16	+	2045	2	NNC	ENSMUSG00000022698.18	novel	2136	4	NA	NA	8	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAACTCTTACGTTTTTA	NA	False	NA	NA	False	GATAAA	-27	NA	43960200	43981606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43979835
ES.13754.25	chr16	+	1735	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	2767	8	-575	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAACAGAATTGCATTACG	NA	False	NA	21	True	AATAAA	-25	NA	43960200	43980962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.26	chr16	+	4509	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	-7	8	7	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTTGTCAACCAA	NA	False	NA	11	True	ATTAAA	-23	NA	43960200	43983736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.27	chr16	+	4029	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-15	473	8	419	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATTTTGCTTATTACC	NA	False	NA	NA	False	AATATA	-21	NA	43960200	43983256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.28	chr16	+	3280	2	NNC	ENSMUSG00000022698.18	novel	2136	4	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTGTAACTGTCATG	NA	False	NA	23	True	AATAAA	-23	NA	43960200	43982841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43979835
ES.13754.29	chr16	+	3614	5	NNC	ENSMUSG00000022698.18	novel	3557	5	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	727.529552664357	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATCTGTCTGTAACTG	NA	False	NA	18	True	AATAAA	-18	NA	43960207	43982836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979810
ES.13754.3	chr16	+	3583	4	FSM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	-145	-1302	-83	2	multi-exon	FALSE	canonical	3	8	junction_2	621.795965106097	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTGTAACTGTCA	NA	False	NA	21	True	AATAAA	-21	NA	43960109	43982839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43978242_43978310_43979825
ES.13754.30	chr16	+	3180	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-7	1314	-7	-420	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAATTCTATTAACTG	NA	False	NA	NA	False	TATAAA	-16	NA	43960208	43982415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.32	chr16	+	4334	4	FSM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	-7	-2191	-1	-1	multi-exon	FALSE	canonical	3	8	junction_2	621.795965106097	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAAGTATTTGTTTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	43960247	43983728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43978242_43978310_43979825
ES.13754.33	chr16	+	1707	6	NNC	ENSMUSG00000022698.18	novel	3557	5	NA	NA	2	-485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	695.175200938584	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATTGAGTGTTTAATA	NA	False	NA	3	True	AATACA	-15	NA	43960256	43981052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825_43979930_43979988
ES.13754.34	chr16	+	2673	1	NIC	ENSMUSG00000022698.18	novel	3756	6	NA	NA	3	-18607	mono-exon	FALSE	NA	NA	NA	NA	NA	1031	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAACTACATTATTAGAC	NA	False	NA	NA	False	NA	NA	NA	43960257	43962930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43960300_43962900
ES.13754.35	chr16	+	3487	5	NNC	ENSMUSG00000022698.18	novel	3756	6	NA	NA	301	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	687.121304792684	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATCTGTCTGTAACT	NA	False	NA	17	True	AATAAA	-17	NA	43960555	43982835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43960712_43976775_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.36	chr16	+	3089	3	NNC	ENSMUSG00000022698.18	novel	3756	6	NA	NA	6945	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	757	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43967199	43982837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43967210_43978242_43978310_43979825
ES.13754.37	chr16	+	172	1	Intergenic	novelGene_11550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1032	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATGTAGTTGA	NA	False	NA	NA	False	NA	NA	NA	43967451	43967623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_43967500_43967600
ES.13754.38	chr16	+	4091	3	ISM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	17220	1	17181	-1	3prime_fragment	FALSE	canonical	3	1514	junction_2	67.5	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAAGTATTTGTTTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	43977435	43983728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43977557_43978242_43978310_43979825
ES.13754.39	chr16	+	3082	2	ISM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	17989	0	17983	0	3prime_fragment	FALSE	canonical	3	1514	junction_1	0	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATCTGTCTGTAACT	NA	False	NA	17	True	AATAAA	-17	NA	43978237	43982835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43978310_43979825
ES.13754.40	chr16	+	3010	3	NNC	ENSMUSG00000022698.18	novel	2136	4	NA	NA	20192	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAAAGTATTTGTTTT	NA	False	NA	1	True	ATTAAA	-13	NA	43980446	43983726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43981337_43981551_43982270_43982324
ES.13754.5	chr16	+	2829	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-87	1745	-64	447	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCCTCTATTTCTATA	NA	False	NA	NA	False	TATAAA	-17	NA	43960128	43981984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.6	chr16	+	1945	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-83	2625	-60	-433	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACATTGTTATGCTA	NA	False	NA	55	True	AATATA	-28	NA	43960132	43981104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.7	chr16	+	5191	4	ISM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-81	893	-58	1	intron_retention	FALSE	canonical	3	958	junction_1	311.953344089928	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATCTGTCTGTAACTG	NA	False	NA	18	True	AATAAA	-18	NA	43960134	43982836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242
ES.13754.8	chr16	+	2984	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-75	1578	-52	614	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAGCTTCTTTTTCCAC	NA	False	NA	NA	False	AATAAA	-27	NA	43960140	43982151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13754.9	chr16	+	982	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-69	3574	-46	-1382	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATCATGTGTTGGA	NA	False	NA	95	True	NA	NA	NA	43960146	43980155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ES.13755.1	chr16	-	4259	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	-21	-4	-21	4	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCCTTTTTATTCTTT	NA	False	NA	4	True	AATAAA	-22	NA	43959689	43905760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.10	chr16	-	2943	8	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	32333	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	166.164658930685	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43927010	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43926953
ES.13755.13	chr16	-	3406	3	ISM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	47014	2	46689	-2	3prime_fragment	FALSE	canonical	3	471	junction_1	15.5	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43912654	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_43907880_43909268_43909441_43911533
ES.13755.14	chr16	-	4064	16	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	158.755017418523	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959402	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934463_43934562_43934976_43935106_43937149_43937246_43959324
ES.13755.15	chr16	-	3864	14	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	24261	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	170.105849399719	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43935082	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921720_43921816_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976
ES.13755.16	chr16	-	6853	14	NIC	ENSMUSG00000052459.14	novel	3896	15	NA	NA	7	-2	intron_retention	FALSE	canonical	3	151	junction_13	87.34824541072	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959374	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43935106_43937149_43937246_43959310
ES.13755.17	chr16	-	3938	15	NNC	ENSMUSG00000052459.14	novel	3896	15	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	140.935015419975	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959371	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922032_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.18	chr16	-	3974	15	NNC	ENSMUSG00000052459.14	novel	3896	15	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	142.89965438898	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCTTTCCCTTTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	43959402	43905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930004_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.19	chr16	-	4057	16	NNC	ENSMUSG00000052459.14	novel	3896	15	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	160.573333886905	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTCTTTCCCTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	43959367	43905767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43938613_43938727_43959310
ES.13755.2	chr16	-	4021	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	118	-243	-60	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959441	43905764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.21	chr16	-	3766	17	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.286545726112	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTCTTTCCCTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	43959380	43905767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43906840_43906965_43907633_43907683_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.24	chr16	-	8403	15	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	15	-4	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_7	125.246858284765	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTTTCTTTCCCTTTT	NA	False	NA	-4	True	AATAAA	-14	NA	43959366	43905768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43926013_43926586_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.26	chr16	-	3943	15	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	125.729788005217	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTAACTTTTCTTTCCC	NA	False	NA	-8	True	AATAAA	-10	NA	43959391	43905772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922243_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.27	chr16	-	3771	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	127	-2	-51	2	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAGTTCTCTATTTATT	NA	False	NA	-9	True	AATATA	-19	NA	43959432	43906005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.28	chr16	-	3989	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	3	242	3	1	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAGTTCTCTATTTAT	NA	False	NA	-10	True	AATATA	-18	NA	43959665	43906006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.29	chr16	-	2527	16	NNC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.466703256489	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTATGCAGTTCTCT	NA	False	NA	-16	True	AATATA	-12	NA	43959405	43906012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_43906480_43907675_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.3	chr16	-	3953	15	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	123.339687738491	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959417	43905764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959354
ES.13755.30	chr16	-	3159	15	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-13	-621	combination_of_known_junctions	FALSE	canonical	3	3	junction_14	122.59015840913	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTTGATGTTTC	NA	False	NA	NA	False	AAAAAG	-16	NA	43960006	43906628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959873
ES.13755.31	chr16	-	3375	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	-9	868	-9	-625	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAATTTTTGTCTTGATG	NA	False	NA	NA	False	AAAAAG	-12	NA	43959677	43906632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.32	chr16	-	3148	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	123	625	-55	-625	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAATTTTTGTCTTGATG	NA	False	NA	NA	False	AAAAAG	-12	NA	43959436	43906632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.33	chr16	-	3073	15	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-24	-625	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	123.339687738491	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAATTTTTGTCTTGATG	NA	False	NA	NA	False	AAAAAG	-12	NA	43959405	43906632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959354
ES.13755.34	chr16	-	4634	14	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-21	-650	intron_retention	FALSE	canonical	3	337	junction_13	45.8612520312063	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43959402	43906657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.37	chr16	-	2575	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	181	1140	3	-1140	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGGTGGTCAAACTTA	NA	False	NA	NA	False	GATAAA	-41	NA	43959378	43907147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ES.13755.38	chr16	-	2585	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	266	1383	-21	-1140	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGGTGGTCAAACTTA	NA	False	NA	NA	False	GATAAA	-41	NA	43959402	43907147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.39	chr16	-	2454	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	263	1517	-24	-1274	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTGTATCAATCAGG	NA	False	NA	NA	False	CATAAA	-14	NA	43959405	43907281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ES.13755.4	chr16	-	4093	15	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_14	122.59015840913	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43960076	43905764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959873
ES.13755.40	chr16	-	1862	13	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	24543	1600	24327	-1600	3prime_fragment	FALSE	canonical	3	410	junction_3	31.1647726697237	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGAGCTAGCTCCCT	NA	False	NA	NA	False	TATAAA	-24	NA	43935016	43907607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976
ES.13755.41	chr16	-	2326	1	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	45867	-5143	mono-exon	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGAGTGCCCCTTCT	NA	False	NA	NA	False	NA	NA	NA	43913476	43911150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_43911200_43913500
ES.13756.1	chr16	-	221	1	Intergenic	novelGene_11549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCTTAAAA	7052	False	NA	NA	False	NA	NA	NA	43966903	43966682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43966700_43966900
ES.13757.1	chr16	-	164	1	Intergenic	novelGene_11551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACTTTTTTTTTCC	5133	False	NA	NA	False	NA	NA	NA	43975132	43974968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_43975000_43975100
ES.13758.1	chr16	+	8127	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-16	4597	-16	-4595	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGTCCTTCATAACAG	NA	False	NA	NA	False	ATTAAA	-19	NA	43993592	44043231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.10	chr16	+	7584	6	NIC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	-4	-5008	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	24.5063257139866	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGGGAGCCACATTCT	NA	False	NA	NA	False	AATAAA	-23	NA	43993604	44042818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43993874_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.11	chr16	+	12711	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCTCTTCCCGCCCAG	NA	False	NA	NA	False	AATAAA	-24	NA	43993605	44047828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.12	chr16	+	7988	6	NIC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	4	-4596	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	24.5063257139866	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTCCTTCATAACA	NA	False	NA	NA	False	ATTAAA	-18	NA	43993612	44043230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_43993874_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.13	chr16	+	7251	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	13	5444	13	-5442	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTGCTTTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	43993621	44042384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.14	chr16	+	157	1	Intergenic	novelGene_11552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	44008135	44008292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_44008100_44008300
ES.13758.15	chr16	+	9072	5	ISM	ENSMUSG00000068284.15	ENSMUST00000169582.3	12604	8	25870	4598	25870	-4598	3prime_fragment	FALSE	canonical	3	10	junction_4	20.3592730715023	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTATTGTCCTTCATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	44019629	44043228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.16	chr16	+	8688	1	NIC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	40782	-4597	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATTGTCCTTCATAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	44034541	44043229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44034500_44043200
ES.13758.2	chr16	+	8042	5	NNC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	-14	-4561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.2294017814916	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCATTATTTTTCTTG	NA	False	NA	NA	False	AAGAAA	-2	NA	43993594	44043265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43993874_44020976_44021072_44025360_44025444_44033002_44033100_44035777
ES.13758.3	chr16	+	8055	8	NNC	ENSMUSG00000068284.15	novel	12604	8	NA	NA	-11	-4598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.4935364865881	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTATTGTCCTTCATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	43993597	44043228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43993692_43993755_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.4	chr16	+	8109	7	NNC	ENSMUSG00000068284.15	novel	12708	7	NA	NA	-11	-4597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1223732018408	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATTGTCCTTCATAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	43993597	44043229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_43993863_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.6	chr16	+	881	6	ISM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-11	14516	-11	17	5prime_fragment	FALSE	canonical	3	31	junction_1	10.2097992144802	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTATTTCATGTT	NA	False	NA	NA	False	NA	NA	NA	43993597	44033312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002
ES.13758.7	chr16	+	8423	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-10	4295	-10	-4293	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGTTCTCAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	43993598	44043533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.8	chr16	+	8167	8	FSM	ENSMUSG00000068284.15	ENSMUST00000169582.3	12604	8	-160	4597	-9	-4597	multi-exon	FALSE	canonical	1	3	junction_2	23.9344342497821	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATTGTCCTTCATAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	43993599	44043229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44019481_44019531_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13758.9	chr16	+	7149	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	-5	5564	-5	-5562	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGGGTGTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	43993603	44042264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ES.13759.1	chr16	+	184	1	Intergenic	novelGene_11553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGTAAAACTTACATAA	NA	False	NA	NA	False	AATAAA	-35	NA	44048462	44048646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_44048500_44048600
ES.1376.1	chr1	-	1221	5	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	133783437	133778920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133779566_133780937_133781171_133781511_133781675_133782923_133783073_133783406
ES.13760.1	chr16	-	184	1	Intergenic	novelGene_11554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATCAGAGACTC	8387	False	NA	NA	False	NA	NA	NA	44053112	44052928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_44052900_44053100
ES.13761.1	chr16	+	177	1	Intergenic	novelGene_11555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACATTTCA	6845	False	NA	NA	False	NA	NA	NA	44130415	44130592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_44130400_44130600
ES.13762.1	chr16	-	4105	25	FSM	ENSMUSG00000022696.18	ENSMUST00000136381.8	4404	25	299	0	-151	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTGTGCCGTCTTTCT	NA	False	NA	NA	False	TTTAAA	-24	NA	44153055	44060542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44062063_44063830_44063945_44065497_44065609_44065695_44065802_44071523_44071571_44075313_44075391_44078295_44078405_44079795_44079933_44082053_44082172_44082381_44082506_44083651_44083726_44086124_44086192_44087363_44087438_44088128_44088275_44090210_44090283_44094103_44094148_44102157_44102252_44102816_44102889_44104574_44104663_44106681_44106766_44107605_44107708_44111612_44111659_44120164_44120336_44121303_44121426_44152669
ES.13763.1	chr16	-	170	1	Intergenic	novelGene_11556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	44157207	44157037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_44157000_44157200
ES.13764.1	chr16	+	3103	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	269	1255	-24	99	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTTTTCTATTATC	6377	False	NA	23	True	AATAAA	-28	NA	44167752	44207605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.10	chr16	+	3124	18	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	7	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.7611171393987	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6408	False	NA	18	True	AATAAA	-23	NA	44167783	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193086_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.11	chr16	+	3578	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	15	94	intron_retention	FALSE	canonical	0	0	junction_1	37.7708882606697	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6416	False	NA	18	True	AATAAA	-23	NA	44167791	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.13	chr16	+	5523	15	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	17	87	intron_retention	FALSE	canonical	0	0	junction_1	50.884623394098	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6418	False	NA	11	True	AATAAA	-16	NA	44167793	44207593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44191309_44192896_44193029_44196004_44196152_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.14	chr16	+	3062	18	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	17	89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1703427216542	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6418	False	NA	13	True	AATAAA	-18	NA	44167793	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167874_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188118_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.15	chr16	+	4624	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	17	94	intron_retention	FALSE	canonical	0	0	junction_1	36.6375298532802	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6418	False	NA	18	True	AATAAA	-23	NA	44167793	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.16	chr16	+	4212	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	311	104	18	-104	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTGGAGTCTGTAT	6419	False	NA	NA	False	AGTAAA	-24	NA	44167794	44208756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.17	chr16	+	5226	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	19	89	intron_retention	FALSE	canonical	0	0	junction_1	37.8355505958204	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6420	False	NA	13	True	AATAAA	-18	NA	44167795	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.18	chr16	+	3067	18	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	19	88	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.5623814180697	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6420	False	NA	12	True	AATAAA	-17	NA	44167795	44207594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197142_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.19	chr16	+	2803	15	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	20	94	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.328722515781	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6421	False	NA	18	True	AATAAA	-23	NA	44167796	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.2	chr16	+	3312	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-20	94	intron_retention	FALSE	canonical	0	0	junction_1	36.6614046887186	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6381	False	NA	18	True	AATAAA	-23	NA	44167756	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.20	chr16	+	9757	11	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	20	94	intron_retention	FALSE	non_canonical	0	0	junction_1	60.2664085540195	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6421	False	NA	18	True	AATAAA	-23	NA	44167796	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44178122_44178267_44185946_44187203_44187277_44188112_44190242_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.21	chr16	+	3002	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	24	94	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.2833029498811	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6425	False	NA	18	True	AATAAA	-23	NA	44167800	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.22	chr16	+	3322	18	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	25	87	intron_retention	FALSE	canonical	0	0	junction_1	46.1430752226535	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6426	False	NA	11	True	AATAAA	-16	NA	44167801	44207593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44168370_44168433_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.23	chr16	+	3200	19	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	27	402	intron_retention	FALSE	non_canonical	0	0	junction_1	53.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTGAATGTGTTTT	6428	False	NA	NA	False	GATAAA	-20	NA	44167803	44209262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148_44207221_44208699_44208822_44209069
ES.13764.24	chr16	+	3246	17	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	28	89	intron_retention	FALSE	canonical	0	0	junction_1	48.2800667330732	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6429	False	NA	13	True	AATAAA	-18	NA	44167804	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175886_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.25	chr16	+	3079	19	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	37	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.8046715105144	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6438	False	NA	11	True	AATAAA	-16	NA	44167813	44207593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44168370_44168433_44175802_44175886_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.26	chr16	+	4294	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	330	3	37	-3	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCCCCCGTAGAT	6438	False	NA	NA	False	AATAAA	-20	NA	44167813	44208857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.27	chr16	+	3711	15	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	39	94	intron_retention	FALSE	canonical	0	0	junction_1	50.1745931315678	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6440	False	NA	18	True	AATAAA	-23	NA	44167815	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.29	chr16	+	2944	17	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	42	88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.2833029498811	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACGTGATACTTTTTT	6443	False	NA	12	True	AATAAA	-17	NA	44167818	44207594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44168370_44168433_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.3	chr16	+	3075	18	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-14	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.8417050150795	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6387	False	NA	18	True	AATAAA	-23	NA	44167762	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175886_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.31	chr16	+	3194	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	45	89	intron_retention	FALSE	canonical	0	0	junction_1	49.8633688749121	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6446	False	NA	13	True	AATAAA	-18	NA	44167821	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.32	chr16	+	2012	12	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	48	497	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.2921156155098	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTATTTTCAAACTGA	6449	False	NA	NA	False	ATTAAA	-21	NA	44167824	44194499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44193825
ES.13764.33	chr16	+	2860	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	58	89	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.0436964427754	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6459	False	NA	13	True	AATAAA	-18	NA	44167834	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.34	chr16	+	5969	17	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	61	87	intron_retention	FALSE	canonical	0	0	junction_1	48.1246753235801	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6462	False	NA	11	True	AATAAA	-16	NA	44167837	44207593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175886_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.36	chr16	+	3364	18	NNC	ENSMUSG00000043065.13	novel	1989	9	NA	NA	296	89	intron_retention	FALSE	canonical	0	0	junction_1	46.1430752226535	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6697	False	NA	13	True	AATAAA	-18	NA	44168072	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44168181_44168370_44168433_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.37	chr16	+	2978	17	ISM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	8317	1265	7392	89	3prime_fragment	FALSE	canonical	3	119	junction_12	15.197527553849	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	2518	False	NA	13	True	AATAAA	-18	NA	44175800	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.38	chr16	+	3922	12	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-1318	94	intron_retention	FALSE	non_canonical	0	0	junction_1	44.0730047996063	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	NA	False	NA	18	True	AATAAA	-23	NA	44186695	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44187195_44187273_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.39	chr16	+	2360	11	ISM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	22757	1269	-146	85	3prime_fragment	FALSE	canonical	3	119	junction_6	14.4166570327521	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAAACGTGATACTTT	NA	False	NA	9	True	AATAAA	-14	NA	44190240	44207591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.4	chr16	+	2935	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-10	89	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8355505958204	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6391	False	NA	13	True	AATAAA	-18	NA	44167766	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.41	chr16	+	4305	3	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-6204	98	intron_retention	FALSE	canonical	3	136	junction_1	12.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTTTTTTTCTATTAT	NA	False	NA	22	True	AATAAA	-27	NA	44199542	44207604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44199704_44202381_44206070_44207148
ES.13764.5	chr16	+	3385	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-10	94	intron_retention	FALSE	canonical	0	0	junction_1	36.6063839207043	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATACTTTTTTTTTCTA	6391	False	NA	18	True	AATAAA	-23	NA	44167766	44207600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.7	chr16	+	3094	18	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-9	89	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.5972956133455	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6392	False	NA	13	True	AATAAA	-18	NA	44167767	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178106_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13764.8	chr16	+	5174	15	NNC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	-2	89	intron_retention	FALSE	canonical	0	0	junction_1	50.8772031062869	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTGATACTTTTTTT	6399	False	NA	13	True	AATAAA	-18	NA	44167774	44207595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44193029_44196004_44196152_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ES.13765.1	chr16	-	11383	4	Antisense	novelGene_ENSMUSG00000043065.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-31	NA	44211906	44198394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_44205135_44205979_44206068_44207146_44210620_44210824
ES.13766.1	chr16	-	179	1	Intergenic	novelGene_11557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCACACAGGCTT	NA	False	NA	NA	False	NA	NA	NA	44284653	44284474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_44284500_44284700
ES.13767.3	chr16	-	3892	18	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	324	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.98526698493043	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGAGTGAGTCAGCGT	NA	False	NA	-1	True	AATAAA	-30	NA	44378936	44305407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ES.13767.4	chr16	-	4469	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	3.04138126514911	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCACGAGTGAGTCAGCG	NA	False	NA	-2	True	AATAAA	-29	NA	44379275	44305408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ES.13767.6	chr16	-	4196	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	166	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.12647280104665	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAGTCACGAGTGAGT	NA	False	NA	-7	True	AATAAA	-24	NA	44379094	44305413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308129_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ES.13767.7	chr16	-	4512	19	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.37444881889545	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTAGTCACGAGTGAG	NA	False	NA	-8	True	AATAAA	-23	NA	44379263	44305414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316981_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ES.13767.8	chr16	-	4247	20	NNC	ENSMUSG00000022687.13	novel	4451	19	NA	NA	363	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	4.40410284662569	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTTAGTCACGAGTG	NA	False	NA	-10	True	AATAAA	-21	NA	44378897	44305416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44306163_44307074_44307266_44307712_44307790_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44374488_44374656_44378800
ES.13767.9	chr16	-	3251	14	ISM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	-3	4814	-3	-4814	5prime_fragment	FALSE	canonical	3	9	junction_7	2.39822419509537	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCTATATTTATTG	NA	False	NA	NA	False	NA	NA	NA	44379263	44310225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ES.13768.1	chr16	+	176	1	Intergenic	novelGene_11558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	44503936	44504112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_44503900_44504100
ES.13769.1	chr16	+	2560	8	NIC	ENSMUSG00000036208.14	novel	2866	9	NA	NA	-24	-175	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	20.0316076769302	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTACTCAAATGCTTA	NA	False	NA	12	True	ATTAAA	-20	NA	44544639	44557472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44544832_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.10	chr16	+	3218	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	221	-152	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	17.4982141945971	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTATCTAATCTTCATTT	NA	False	NA	35	True	ATTAAA	-43	NA	44544940	44557495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44545613_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.11	chr16	+	3340	10	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	224	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3809038890002	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTACTCAAATGCTTAA	NA	False	NA	13	True	ATTAAA	-21	NA	44544943	44557473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44545613_44546011_44546159_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.12	chr16	+	3717	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	235	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0521488289379	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGATTTTCCATTACT	NA	False	NA	2	True	ATTAAA	-10	NA	44544954	44557462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44546159_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.13	chr16	+	2704	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	237	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0521488289379	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTATCTAATCTTCATTT	NA	False	NA	35	True	ATTAAA	-43	NA	44544956	44557495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44545115_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.14	chr16	+	3013	9	NNC	ENSMUSG00000036208.14	novel	602	6	NA	NA	259	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.1702260455094	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCCATTACTCAAATG	NA	False	NA	8	True	ATTAAA	-16	NA	44544978	44557468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44545613_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551834_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.15	chr16	+	2346	8	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	2136	943	270	-232	3prime_fragment	FALSE	canonical	3	45	junction_5	6.67312612235809	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAATCACATGGTGAGT	NA	False	NA	NA	False	AATAAA	-21	NA	44546799	44556704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.16	chr16	+	2581	4	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	6546	157	3728	-157	3prime_fragment	FALSE	canonical	3	45	junction_1	8.33999733546454	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACCATTATCTAATCTT	NA	False	NA	30	True	ATTAAA	-38	NA	44551209	44557490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.17	chr16	+	3003	2	ISM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	8880	183	6062	-183	3prime_fragment	FALSE	canonical	3	64	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTCCATTACTCA	NA	False	NA	4	True	ATTAAA	-12	NA	44553543	44557464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44555161_44556078
ES.13769.18	chr16	+	4073	1	Genic_Genomic	ENSMUSG00000036208.14	novel	NA	NA	NA	NA	8594	2501	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	44556075	44560148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_44556100_44560100
ES.13769.2	chr16	+	2737	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-23	152	-23	-152	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTATCTAATCTTCATTT	NA	False	NA	35	True	ATTAAA	-43	NA	44544640	44557495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.3	chr16	+	3112	8	NIC	ENSMUSG00000036208.14	novel	2866	9	NA	NA	-19	-179	intron_retention	FALSE	canonical	3	32	junction_1	10.3430939199417	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCCATTACTCAAATG	NA	False	NA	8	True	ATTAAA	-16	NA	44544644	44557468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.4	chr16	+	5399	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-19	-2514	-19	2514	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	False	NA	NA	False	AATAAA	-28	NA	44544644	44560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.5	chr16	+	4756	8	NIC	ENSMUSG00000036208.14	novel	2866	9	NA	NA	-11	-180	intron_retention	FALSE	canonical	3	32	junction_1	10.1940358713779	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTCCATTACTCAAAT	NA	False	NA	7	True	ATTAAA	-15	NA	44544652	44557467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44544832_44547390_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.6	chr16	+	3319	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-1	-452	-1	452	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTAATCTGAACCA	NA	False	NA	NA	False	ATTAAA	-17	NA	44544662	44558099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.7	chr16	+	2161	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	-1	706	-1	5	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTTTTAAAGTTTTAT	NA	False	NA	NA	False	CATAAA	-25	NA	44544662	44556941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.8	chr16	+	4148	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	65	-1347	9	1347	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGCTGTGTGGTTGCT	NA	False	NA	NA	False	GATAAA	-13	NA	44544728	44558994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.13769.9	chr16	+	5901	9	NNC	ENSMUSG00000036208.14	novel	3743	6	NA	NA	204	2514	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	17.4982141945971	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	False	NA	NA	False	AATAAA	-28	NA	44544923	44560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44545613_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ES.1377.1	chr1	-	620	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAGAGTTGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	133813914	133813294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133813300_133813900
ES.13770.1	chr16	-	3068	1	Intergenic	novelGene_11559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTGTGAGATATTT	NA	False	NA	NA	False	NA	NA	NA	44542072	44539004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_44539000_44542100
ES.13770.2	chr16	-	1593	3	Antisense	novelGene_ENSMUSG00000036208.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTCTGATCCTTGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	44544855	44539462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_44540791_44544084_44544172_44544677
ES.13770.3	chr16	-	4853	3	Antisense	novelGene_ENSMUSG00000036208.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTCTGATCCTTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	44544866	44539463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_44542021_44542064_44544172_44544677
ES.13770.4	chr16	-	1873	1	Intergenic	novelGene_11560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGACTGTGTGTGTG	NA	False	NA	NA	False	ACTAAA	-23	NA	44543135	44541262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_44541300_44543100
ES.13771.1	chr16	-	1515	7	NNC	ENSMUSG00000022668.11	novel	836	6	NA	NA	9	5223	intron_retention	FALSE	canonical	0	0	junction_1	48.0257454103757	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTTTGTTACTCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	44566713	44551907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44552594_44559502_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566562
ES.13771.10	chr16	-	1283	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	18	2114	14	260	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTCTTCTTCTAGTA	NA	False	NA	NA	False	AATAGA	-19	NA	44566708	44559244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.11	chr16	-	1180	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	17	2218	13	156	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTCTACTGTCTTCA	NA	False	NA	84	True	TATAAA	-29	NA	44566709	44559348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.12	chr16	-	6857	2	NIC	ENSMUSG00000022668.11	novel	583	3	NA	NA	11	155	intron_retention	FALSE	canonical	3	112	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTCTACTGTCTTC	NA	False	NA	83	True	TATAAA	-28	NA	44566711	44559349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44565857_44566361
ES.13771.13	chr16	-	1072	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	16	2327	12	47	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTAGCTGGCTTTTCT	NA	False	NA	-25	True	ATTAAA	-20	NA	44566710	44559457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.14	chr16	-	933	5	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	16	43	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	47.3675785743793	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGATGCTAGCTGGCTT	NA	False	NA	-29	True	ATTAAA	-16	NA	44566706	44559461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44565757_44565857_44566361
ES.13771.15	chr16	-	3537	4	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	15	-22	intron_retention	FALSE	canonical	3	110	junction_2	7.58653778449403	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGATGTGTCAGAGTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	44566707	44559649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44560511_44562866_44565857_44566361
ES.13771.16	chr16	-	3480	1	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	14	942	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATAATAATTTGA	NA	False	NA	NA	False	NA	NA	NA	44566708	44563228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44563200_44566700
ES.13771.17	chr16	-	2976	2	NIC	ENSMUSG00000022668.11	novel	583	3	NA	NA	13	942	intron_retention	FALSE	canonical	3	112	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATAATAATTTGA	NA	False	NA	NA	False	NA	NA	NA	44566709	44563228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44565857_44566361
ES.13771.18	chr16	-	2451	1	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	12	-89	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTTTTCCATTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	44566710	44564259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44564300_44566700
ES.13771.19	chr16	-	811	1	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	11	-1730	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACTAAGTACTCCATT	NA	False	NA	NA	False	AATAAA	-21	NA	44566711	44565900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44565900_44566700
ES.13771.2	chr16	-	5710	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	18	-2313	14	2313	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAAAATAATTT	NA	False	NA	NA	False	AATAAA	-30	NA	44566708	44554817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.3	chr16	-	4502	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	5	-1092	1	1092	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGTTCTCACTTTTTA	NA	False	NA	NA	False	ACTAAA	-36	NA	44566721	44556038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.4	chr16	-	4347	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	20	-952	16	952	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTCTGGGAGGAT	NA	False	NA	NA	False	GATAAA	-15	NA	44566706	44556178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.5	chr16	-	3397	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	18	0	14	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566708	44557130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ES.13771.6	chr16	-	6882	4	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	89	junction_2	15.6276108929747	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566703	44557130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44564232_44565757_44565857_44566361
ES.13771.7	chr16	-	3307	6	NIC	ENSMUSG00000022668.11	novel	836	6	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	48.4520381408254	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	44566709	44557132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565645_44565857_44566562
ES.13771.8	chr16	-	3262	5	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	16	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	47.3675785743793	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	44566706	44557132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44565757_44565857_44566361
ES.13771.9	chr16	-	3389	5	NIC	ENSMUSG00000022668.11	novel	3415	6	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	47.3675785743793	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTGCCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	44566724	44557135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44559732_44560391_44560511_44562866_44562967_44565645_44565857_44566361
ES.13772.1	chr16	-	4141	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	43	49	-8	-49	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATTTGTGAACTTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	44979026	44959984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.2	chr16	-	3391	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	37	805	-14	-805	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTATTTTAGAAGCAT	NA	False	NA	NA	False	AATAAA	-17	NA	44979032	44960740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.3	chr16	-	2946	6	NIC	ENSMUSG00000022664.12	novel	4233	7	NA	NA	-5	-1173	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	23.3632189562997	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTGATGTCTAAAGAAT	NA	False	NA	54	True	NA	NA	NA	44979023	44961108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44962576_44963983_44964765_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.4	chr16	-	2957	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	37	1239	-14	1134	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTGTACTATGT	NA	False	NA	-12	True	ATTAAA	-18	NA	44979032	44961174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.5	chr16	-	2585	8	NNC	ENSMUSG00000022664.12	novel	4233	7	NA	NA	-14	1134	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	20.0244748204974	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTGTACTATGT	NA	False	NA	-12	True	ATTAAA	-18	NA	44979032	44961174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_44962576_44963983_44964070_44964441_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.7	chr16	-	2097	5	NIC	ENSMUSG00000022664.12	novel	4233	7	NA	NA	-5	1132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.7730479377197	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGAATCTGTACTAT	NA	False	NA	-14	True	ATTAAA	-16	NA	44979023	44961176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_44962576_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13772.8	chr16	-	2176	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	47	2010	-4	363	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTTTTTAAATCATC	NA	False	NA	NA	False	AATAAA	-14	NA	44979022	44961945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ES.13773.1	chr16	+	1555	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-108	610	-108	34	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCATTTCCTGTCAG	NA	False	NA	21	True	AATAAA	-16	NA	44979039	45008291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.10	chr16	+	3746	11	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	48	0	intron_retention	FALSE	canonical	2	5	junction_5	182.28428346953	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979195	45008257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44994728_44994804_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45006598_45008022
ES.13773.12	chr16	+	3806	12	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	59	21	intron_retention	FALSE	canonical	2	5	junction_6	154.307142462285	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAAGAGATGTTTT	NA	False	NA	8	True	AATAAA	-38	NA	44979206	45008278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44994728_44994804_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45006598_45008022
ES.13773.13	chr16	+	1478	13	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	95	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.918732956067	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGATGTTTTCATTTC	NA	False	NA	14	True	AATAAA	-44	NA	44979242	45008284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979535_44982768_44982811_44984576_44984710_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.15	chr16	+	5504	7	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	6772	32	intron_retention	FALSE	canonical	2	5	junction_1	150.141044798993	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTCATTTCCTGTC	NA	False	NA	19	True	AATAAA	-14	NA	44993017	45008289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44994804_44995611_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.16	chr16	+	875	5	ISM	ENSMUSG00000022663.4	ENSMUST00000150390.2	2081	10	16520	1	16520	-1	3prime_fragment	FALSE	canonical	3	355	junction_3	41.5782395009697	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTATTTGTTTAATAAA	NA	False	NA	14	True	AATAAA	-16	NA	45002765	45008256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.2	chr16	+	4967	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-30	29	intron_retention	FALSE	canonical	3	353	junction_3	31.5976264931403	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATGTTTTCATTTCCT	NA	False	NA	16	True	AATAAA	-11	NA	44979117	45008286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.3	chr16	+	3830	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-30	31	intron_retention	FALSE	canonical	3	353	junction_3	31.4020699954637	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTTTCATTTCCTGT	NA	False	NA	18	True	AATAAA	-13	NA	44979117	45008288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45006598_45008022
ES.13773.4	chr16	+	1482	12	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-29	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	119.966868704559	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTCATTTCCTGTC	NA	False	NA	19	True	AATAAA	-14	NA	44979118	45008289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004181_45006528_45006598_45008022
ES.13773.5	chr16	+	3512	11	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	-26	-4	-26	4	intron_retention	FALSE	canonical	3	353	junction_3	26.5723540545432	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATGCCACATATATTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	44979121	45008905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528
ES.13773.6	chr16	+	1249	13	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-22	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.910351530612	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATGTTTGTGAAGA	NA	False	NA	0	True	AATAAA	-30	NA	44979125	45008270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979197_44979395_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.7	chr16	+	1395	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	-19	13	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	116.159201099181	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATGTTTGTGAAGA	NA	False	NA	0	True	AATAAA	-30	NA	44979128	45008270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ES.13773.8	chr16	+	2928	12	NNC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	14	29	intron_retention	FALSE	canonical	2	5	junction_6	148.393212292697	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATGTTTTCATTTCCT	NA	False	NA	16	True	AATAAA	-11	NA	44979161	45008286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44994728_44994804_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528
ES.13773.9	chr16	+	2859	11	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	14	609	14	35	intron_retention	FALSE	canonical	3	353	junction_3	26.5723540545432	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCATTTCCTGTCAGA	NA	False	NA	22	True	AATAAA	-17	NA	44979161	45008292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528
ES.13774.1	chr16	-	4976	3	Antisense	novelGene_ENSMUSG00000022663.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGTTTTCTAACAAG	7348	False	NA	NA	False	NA	NA	NA	44992418	44982897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_44987392_44990227_44990298_44992006
ES.13775.1	chr16	-	7968	2	Antisense	novelGene_ENSMUSG00000022663.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTTCTAATACAGATCT	8830	False	NA	NA	False	NA	NA	NA	45010142	45001469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_45003338_45004042
ES.13776.1	chr16	-	714	4	NNC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	16	44098	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCTTGTATTAATCA	NA	False	NA	NA	False	AATAAA	-19	NA	45229354	45158399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45158812_45182729_45182828_45185711_45185780_45229218
ES.13776.2	chr16	-	2327	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	48	-28	2	28	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTCAGTTAACCTTTC	NA	False	NA	NA	False	AATAAA	-35	NA	45229368	45202469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ES.13776.3	chr16	-	2007	6	NNC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.7086164228309	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTTTTTCTCTATG	NA	False	NA	NA	False	AATAAA	-13	NA	45229235	45202491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45203579_45203656_45203821_45212607_45212752_45214955_45215224_45217331_45217659_45229218
ES.13776.4	chr16	-	2190	5	NIC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	16	-13	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	11.6270159542335	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAGAATAACACTTGA	NA	False	NA	NA	False	AATATA	-2	NA	45229354	45202510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45229218
ES.13776.5	chr16	-	2344	7	NNC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.23760430703401	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGATGTGGCATTC	NA	False	NA	NA	False	ATTAAA	-27	NA	45229379	45202545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45203821_45212607_45212752_45213885_45213941_45214955_45215256_45217331_45217659_45220584_45220667_45229218
ES.13776.6	chr16	-	257	2	FSM	ENSMUSG00000022661.15	ENSMUST00000172091.2	281	2	27	-3	16	3	multi-exon	FALSE	canonical	3	15	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGCCTATCCTTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	45229354	45227553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45227675_45229218
ES.13776.7	chr16	-	1783	2	NNC	ENSMUSG00000022661.15	novel	281	2	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGCCTATCCTTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	45229386	45227553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45227955_45228004
ES.13777.1	chr16	+	178	1	Intergenic	novelGene_11561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAACTA	NA	False	NA	NA	False	NA	NA	NA	45527008	45527186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_45527000_45527200
ES.13778.1	chr16	-	1884	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	180	-824	180	824	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45544791	45530768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
ES.13778.2	chr16	-	1513	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	-273	0	-273	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45545244	45531592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
ES.13778.3	chr16	-	2555	3	ISM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	-286	0	-286	0	intron_retention	FALSE	canonical	3	70	junction_1	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45545257	45531592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45532073_45533294_45533398_45543285
ES.13779.1	chr16	+	4358	1	Antisense	novelGene_ENSMUSG00000033157.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTACCCCTGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	45552248	45556606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_45552200_45556600
ES.13779.2	chr16	+	4866	1	Genic_Genomic	ENSMUSG00000086237.2	novel	NA	NA	NA	NA	-4617	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGACCAAGCAATAGGG	NA	False	NA	NA	False	NA	NA	NA	45552248	45557114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_45552200_45557100
ES.1378.1	chr1	+	2093	1	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	133909810	133911903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_133909800_133911900
ES.13780.1	chr16	-	2679	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGAGTCCTGTGCATTC	NA	False	NA	-1	True	NA	NA	NA	45563329	45550083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
ES.13780.10	chr16	-	6623	4	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-15	399	intron_retention	TRUE	non_canonical	0	0	junction_1	145.038692155653	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTGCCATGCTATATT	NA	False	NA	NA	False	AATAAA	-11	NA	45563285	45551514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45556925_45557115_45557999_45560681_45560866_45563139
ES.13780.11	chr16	-	1071	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	280	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGAAGTTTGTAAAATT	NA	False	NA	15	True	AATAAA	-36	NA	45563271	45551633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
ES.13780.12	chr16	-	1329	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-29	1548	-29	278	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGGAAGTTTGTAAAA	NA	False	NA	13	True	AATAAA	-34	NA	45563347	45551635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.13	chr16	-	6303	3	NNC	ENSMUSG00000033157.18	novel	771	2	NA	NA	-6	272	intron_retention	FALSE	non_canonical	0	0	junction_1	46	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTATATATGGAAGTTT	NA	False	NA	7	True	AATAAA	-28	NA	45563276	45551641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45556925_45557115_45557999_45563139
ES.13780.14	chr16	-	1325	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	260	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTCTGGTACCATTAT	NA	False	NA	-5	True	AATAAA	-16	NA	45563319	45551653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.15	chr16	-	8261	1	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	3251	177	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTTTGCCTTTCTTAC	NA	False	NA	-29	True	ATTAAA	-23	NA	45559997	45551736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45551700_45560000
ES.13780.16	chr16	-	1631	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	3	174	intron_retention	FALSE	canonical	3	291	junction_2	12.8322510366134	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGTTTGCCTTTCT	NA	False	NA	-32	True	ATTAAA	-20	NA	45563260	45551739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45557255_45557999_45560681_45560866_45563139
ES.13780.17	chr16	-	1211	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-15	1652	-15	174	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGTTTGCCTTTCT	NA	False	NA	-32	True	ATTAAA	-20	NA	45563333	45551739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.18	chr16	-	965	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	174	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGTTTGCCTTTCT	NA	False	NA	-32	True	ATTAAA	-20	NA	45563271	45551739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
ES.13780.19	chr16	-	1239	6	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-1	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.971520493105	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGTTTGCCTTTCT	NA	False	NA	-32	True	ATTAAA	-20	NA	45563266	45551739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45552323_45557255_45557394_45557536_45557632_45557886_45557999_45560681_45560866_45563139
ES.13780.2	chr16	-	4763	1	Genic_Genomic	ENSMUSG00000033157.18	novel	NA	NA	NA	NA	8399	1	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTGAGTCCTGTGCA	NA	False	NA	-4	True	NA	NA	NA	45554849	45550086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_45550100_45554800
ES.13780.20	chr16	-	6550	5	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-14	170	intron_retention	FALSE	canonical	0	0	junction_1	125.863020780529	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGAGATGTTTGCCT	NA	False	NA	-36	True	ATTAAA	-16	NA	45563284	45551743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45557394_45557536_45557632_45557886_45557999_45560681_45560866_45562775
ES.13780.3	chr16	-	2816	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	33	-1	-15	1	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTGAGTCCTGTGCA	NA	False	NA	-4	True	NA	NA	NA	45563285	45550086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.4	chr16	-	3150	5	NNC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.654231682139	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGTATGGTGAGTC	NA	False	NA	-11	True	NA	NA	NA	45563262	45550093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45562775
ES.13780.5	chr16	-	959	6	NNC	ENSMUSG00000033157.18	novel	827	5	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	123.276924036902	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGTATGGTGAGTC	NA	False	NA	-11	True	NA	NA	NA	45563290	45550093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45550357_45552069_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45563139
ES.13780.6	chr16	-	1530	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-8	1326	-8	500	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAATCTTCCAGATTT	NA	False	NA	NA	False	NA	NA	NA	45563326	45551413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.7	chr16	-	1214	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-10	414	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTTAAAACTAAAATTAC	NA	False	NA	NA	False	AATAAA	-26	NA	45563280	45551499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
ES.13780.8	chr16	-	1431	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	-10	1427	-10	399	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTGCCATGCTATATT	NA	False	NA	NA	False	AATAAA	-11	NA	45563328	45551514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13780.9	chr16	-	1429	6	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	-14	399	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	144.088028649156	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTGCCATGCTATATT	NA	False	NA	NA	False	AATAAA	-11	NA	45563284	45551514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45552323_45553100_45553143_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ES.13781.1	chr16	-	7022	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	10	-1549	10	1549	multi-exon	TRUE	canonical	3	48	junction_15	7.72315083521806	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACGGGGGAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	45664731	45565056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.10	chr16	-	5550	19	NIC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	15	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	19.580476544977	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCACAGTGGAAACACT	NA	False	NA	-13	True	ATTAAA	-10	NA	45664726	45566608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45647504_45647590_45664570
ES.13781.12	chr16	-	5202	8	ISM	ENSMUSG00000033149.18	ENSMUST00000131003.8	2328	13	26770	-914	-2518	-3	3prime_fragment	FALSE	canonical	3	60	junction_2	7.26467550576635	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCACAGTGGAAACACT	NA	False	NA	-13	True	ATTAAA	-10	NA	45595164	45566608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497
ES.13781.13	chr16	-	3737	14	NIC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	-282	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	17.3532733129677	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTCACAGTGGAAACAC	NA	False	NA	-14	True	ATTAAA	-9	NA	45612092	45566609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45611660
ES.13781.14	chr16	-	5344	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	13	126	13	25	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTCTGTACTGTACT	NA	False	NA	NA	False	ATTAAA	-39	NA	45664728	45566731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.16	chr16	-	6309	17	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	7	22	intron_retention	FALSE	canonical	1	4	junction_9	15.9628474903446	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTGTCTGTACTGT	NA	False	NA	NA	False	ATTAAA	-36	NA	45664699	45566734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.17	chr16	-	5233	18	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	15.495283354246	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGCTTGATGTAAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	45664709	45566754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.18	chr16	-	5285	18	NIC	ENSMUSG00000033149.18	novel	5347	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	16.3201109298082	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTTGCTTGATGTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	45664718	45566756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595330_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.2	chr16	-	5441	17	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	18399	-245	18255	245	3prime_fragment	FALSE	canonical	3	48	junction_15	7.3357003755606	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTGGGCTCCTTTC	7747	False	NA	NA	False	AATAAA	-12	NA	45646342	45566360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121
ES.13781.20	chr16	-	4175	17	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	18670	296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.2423058707808	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACTCAAATTACCATT	8162	False	NA	NA	False	ATTAAA	-27	NA	45645927	45567226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609496_45621854_45621993_45623058_45623203_45628488_45628873_45645121
ES.13781.21	chr16	-	4849	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	13	621	13	296	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACTCAAATTACCATT	NA	False	NA	NA	False	ATTAAA	-27	NA	45664728	45567226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.22	chr16	-	4784	18	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	7	294	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	15.495283354246	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAACTCAAATTACCA	NA	False	NA	NA	False	ATTAAA	-25	NA	45664734	45567228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.24	chr16	-	4243	16	NIC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	19	16	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	16.9330708641076	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCCTTGTTTTAAGAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	45664687	45567506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.25	chr16	-	4748	19	NIC	ENSMUSG00000033149.18	novel	5347	19	NA	NA	17	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	20.3475966973504	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCCTTGTTTTAAGAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	45664724	45567506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45594525_45594709_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.26	chr16	-	4477	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	65	941	30	-24	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAATAAAAACCAAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	45664676	45567546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.27	chr16	-	4254	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	17	1212	17	-295	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGCAACTCATTGCCCT	NA	False	NA	NA	False	AATACA	-11	NA	45664724	45567817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.28	chr16	-	4113	16	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	51	4647	16	-3730	5prime_fragment	FALSE	canonical	3	48	junction_13	8.2138095100061	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAGTTTTGTATTAAA	NA	False	NA	NA	False	AATAAA	-26	NA	45664690	45571252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.29	chr16	-	3763	16	NIC	ENSMUSG00000033149.18	novel	5347	19	NA	NA	-21	-3984	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.3212778589418	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAATAAAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	45664618	45571506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595330_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.3	chr16	-	5582	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	-86	-13	-86	13	multi-exon	FALSE	canonical	3	48	junction_15	7.72315083521806	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTCTCCTCTCTCTCTC	NA	False	NA	3	True	ATTAAA	-26	NA	45664827	45566592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.30	chr16	-	3768	16	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	42	5001	7	-4084	5prime_fragment	FALSE	canonical	3	48	junction_13	8.2138095100061	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGAACCTAGAAAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	45664699	45571606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.31	chr16	-	3666	16	ISM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	13	5132	13	-4215	5prime_fragment	FALSE	canonical	3	48	junction_13	8.2138095100061	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAGCGAACATTTTCTT	NA	False	NA	NA	False	ATTAAA	-33	NA	45664728	45571737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.32	chr16	-	3690	17	NIC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	19	-4235	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	20.5878453219369	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTTTGTTTTTGACCG	NA	False	NA	NA	False	ATTAAA	-13	NA	45664687	45571757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45647504_45647590_45664570
ES.13781.33	chr16	-	3033	1	Intergenic	novelGene_11562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAGAGCCAG	NA	False	NA	NA	False	AATGAA	-17	NA	45615965	45612932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_45612900_45616000
ES.13781.34	chr16	-	176	1	Intergenic	novelGene_11563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	45637982	45637806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_45637800_45638000
ES.13781.35	chr16	-	2521	3	FSM	ENSMUSG00000033149.18	ENSMUST00000125433.2	343	3	30	-2208	30	2039	multi-exon	FALSE	canonical	0	0	junction_1	2	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTCAATCGTGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	45664676	45644128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45646459_45647504_45647590_45664570
ES.13781.36	chr16	-	2468	2	ISM	ENSMUSG00000033149.18	ENSMUST00000076333.12	5347	19	-114	77375	-5	2036	5prime_fragment	FALSE	canonical	3	73	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTCTCAATCGTGGAA	NA	False	NA	NA	False	NA	NA	NA	45664711	45644131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_45646459_45664570
ES.13781.4	chr16	-	5347	17	NIC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	17	10	combination_of_known_splicesites	FALSE	canonical	2	6	junction_12	15.4616460960662	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTCTCCTCTCTCT	NA	False	NA	0	True	ATTAAA	-23	NA	45664724	45566595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.5	chr16	-	5423	18	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	15.495283354246	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTGGAAACACTTTC	NA	False	NA	-10	True	ATTAAA	-13	NA	45664750	45566605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.6	chr16	-	5658	19	NIC	ENSMUSG00000033149.18	novel	5347	19	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	20.3475966973504	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTGGAAACACTTTC	NA	False	NA	-10	True	ATTAAA	-13	NA	45664733	45566605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45594525_45594709_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.7	chr16	-	5278	17	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	20.2143783913827	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGTGGAAACACTTT	NA	False	NA	-11	True	ATTAAA	-12	NA	45664735	45566606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595382_45598075_45598166_45600618_45600730_45601664_45601821_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ES.13781.8	chr16	-	5521	19	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.1583239554125	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGTGGAAACACTTT	NA	False	NA	-11	True	ATTAAA	-12	NA	45664713	45566606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45650732_45650800_45664570
ES.13781.9	chr16	-	2960	10	NNC	ENSMUSG00000033149.18	novel	5483	18	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	21.9162265833861	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCACAGTGGAAACACT	NA	False	NA	-13	True	ATTAAA	-10	NA	45664676	45566608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592646_45646287_45646459_45664570
ES.13782.1	chr16	+	196	1	Intergenic	novelGene_11564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTTCCTATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	45750375	45750571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_45750400_45750600
ES.13783.1	chr16	-	7359	4	FSM	ENSMUSG00000087141.2	ENSMUST00000130481.2	7140	4	-220	1	-220	-1	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCGTGTTTCCTTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	45830801	45779626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45785538_45792471_45792714_45800598_45801060_45830056
ES.13783.2	chr16	-	7183	4	FSM	ENSMUSG00000087141.2	ENSMUST00000130481.2	7140	4	-186	143	-186	-143	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTATTGTGAAGCCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	45830767	45779768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45785538_45792471_45792714_45800598_45801060_45830056
ES.13784.1	chr16	-	2122	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	0	-29	0	29	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAATTGTGGCTCGAA	NA	False	NA	NA	False	NA	NA	NA	45975440	45973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45973300_45975400
ES.13784.2	chr16	-	2011	2	Genic_Genomic	ENSMUSG00000048087.7	novel	2093	1	NA	NA	1	-9	multi-exon	FALSE	canonical	1	11	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	GATAAA	-22	NA	45975439	45973356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_45974209_45974280
ES.13784.3	chr16	-	2043	2	Genic_Genomic	ENSMUSG00000048087.7	novel	2093	1	NA	NA	2	-12	multi-exon	FALSE	canonical	0	0	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAAATA	NA	False	NA	NA	False	GATAAA	-19	NA	45975438	45973359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_45975121_45975156
ES.13784.4	chr16	-	1843	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	1	249	1	-249	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTACTTTTTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	45975439	45973596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_45973600_45975400
ES.13785.1	chr16	-	5541	1	Genic_Genomic	ENSMUSG00000022656.16	novel	NA	NA	NA	NA	18165	242	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGTAGAGTGGCTGT	NA	False	NA	NA	False	TATAAA	-34	NA	46213367	46207826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_46207800_46213400
ES.13785.2	chr16	-	5185	1	ISM	ENSMUSG00000022656.16	ENSMUST00000023335.13	9116	9	104075	2	18277	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTATTTCTGTTATC	NA	False	NA	NA	False	AATAAA	-14	NA	46213255	46208070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_46208100_46213300
ES.13786.1	chr16	+	4055	1	Antisense	novelGene_ENSMUSG00000022656.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCCACCAAATACTCTAA	NA	False	NA	NA	False	NA	NA	NA	46266572	46270627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_46266600_46270600
ES.13787.1	chr16	+	2888	1	Intergenic	novelGene_11566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGCAAGCACTAATTGG	NA	False	NA	NA	False	NA	NA	NA	46298843	46301731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_46298800_46301700
ES.13788.1	chr16	-	3948	10	NIC	ENSMUSG00000022656.16	novel	9116	9	NA	NA	-41	1103	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	118.54394403202	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCAGGAGGAAATGA	NA	False	NA	NA	False	AATAAA	-19	NA	46317371	46214117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_46215636_46216442_46216506_46256716_46256802_46258292_46258432_46268491_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.10	chr16	-	3269	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-200	-7	-200	7	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGGGTTTATTTTG	NA	False	NA	0	True	ATTAAA	-20	NA	46317530	46267524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.11	chr16	-	2792	5	NIC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	-34	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	101.921538449927	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCATGAGATTTTT	NA	False	NA	-14	True	ATTAAA	-6	NA	46317364	46267538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_46269332_46274986_46275139_46278476_46278595_46284180_46284523_46316977
ES.13788.12	chr16	-	2950	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-44	156	-44	-156	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGAATTACAGAACCA	NA	False	NA	NA	False	ATTAAA	-32	NA	46317374	46267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.13	chr16	-	2767	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-182	477	-182	-477	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATTACTAATTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	46317512	46268008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.14	chr16	-	2351	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-180	891	-180	-891	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTGGCATTGTGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	46317510	46268422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.15	chr16	-	3640	1	NIC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	-3216	-918	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAACAGAAAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	46272089	46268449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_46268400_46272100
ES.13788.16	chr16	-	2492	7	NNC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	-174	-918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	114.696217122546	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAACAGAAAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	46317504	46268449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46284696_46284871_46316977
ES.13788.17	chr16	-	1881	5	NIC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	-34	-918	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	101.921538449927	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAACAGAAAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	46317364	46268449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_46269332_46274986_46275139_46278476_46278595_46284180_46284523_46316977
ES.13788.2	chr16	-	1748	7	FSM	ENSMUSG00000022656.16	ENSMUST00000096052.9	1746	7	-160	158	-45	-158	multi-exon	FALSE	canonical	3	13	junction_2	112.29784305834	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATTTGTGTTAATTTT	NA	False	NA	-1	True	AATAAA	-16	NA	46317375	46256499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46256802_46258292_46258432_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.3	chr16	-	5918	1	Intergenic	novelGene_11565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTTATTTGTTTTTTT	NA	False	NA	NA	False	AATACA	-19	NA	46264941	46259023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_46259000_46264900
ES.13788.4	chr16	-	7698	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-188	-4448	-188	4448	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTAGACTTTTT	NA	False	NA	-4	True	TTTAAA	-29	NA	46317518	46263083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.5	chr16	-	5287	1	Genic_Genomic	ENSMUSG00000022656.16	novel	NA	NA	NA	NA	395	4340	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTAATTGTCACTATT	NA	False	NA	NA	False	GATAAA	-16	NA	46268478	46263191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_46263200_46268500
ES.13788.6	chr16	-	6306	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	272	-3516	77	3516	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACCAGCTGTAGTATT	NA	False	NA	NA	False	AGTAAA	-33	NA	46317058	46264015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.7	chr16	-	5286	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-44	-2180	-44	2180	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGAGCTTCTGTGCCTGT	NA	False	NA	NA	False	AATAAA	-31	NA	46317374	46265351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.8	chr16	-	3452	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	-64	-326	-64	326	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTTTTCCCAATCCT	NA	False	NA	NA	False	AATAAA	-28	NA	46317394	46267205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13788.9	chr16	-	3264	7	NNC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	39	325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.9717649909773	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCACCTTTTCCCAATCC	NA	False	NA	NA	False	AATAAA	-27	NA	46317291	46267206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_46268408_46268491_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ES.13789.1	chr16	-	5647	1	Intergenic	novelGene_11567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTATCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	46801659	46796012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_46796000_46801700
ES.1379.1	chr1	-	802	2	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTAGCCAGCCTTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	133988622	133987481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_133988192_133988530
ES.13790.1	chr16	+	158	1	Intergenic	novelGene_11568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	47953218	47953376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_47953200_47953400
ES.13791.1	chr16	-	212	1	Intergenic	novelGene_11569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	48028391	48028179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48028200_48028400
ES.13792.1	chr16	-	206	1	Intergenic	novelGene_11570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGGAAGGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	48100130	48099924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48099900_48100100
ES.13793.1	chr16	+	220	1	Intergenic	novelGene_11571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACCAGGCTCGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	48102865	48103085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48102900_48103100
ES.13794.1	chr16	+	1364	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	-83	-10	-29	10	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTTATCTGAAT	NA	False	NA	33	True	ACTAAA	-15	NA	48104066	48114610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
ES.13794.10	chr16	+	2387	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	196.919329224488	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGCTTGTGGCTTTT	NA	False	NA	16	True	NA	NA	NA	48104098	48114593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110658_48111376_48111678_48113273_48113470_48114061
ES.13794.11	chr16	+	1987	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	225.229859911865	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGGCTTTTGTTTT	NA	False	NA	21	True	ACTAAA	-3	NA	48104098	48114598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48109964_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.12	chr16	+	2513	6	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	369	junction_3	79.9864988607452	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104106	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48104205_48108240_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ES.13794.13	chr16	+	1458	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	192.66443193629	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104107	48114601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113458_48114061
ES.13794.14	chr16	+	2325	6	NNC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	17	7	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	199.274082609857	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGTTTTTGTTATCTG	NA	False	NA	30	True	ACTAAA	-12	NA	48104114	48114607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.15	chr16	+	1841	9	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_5	240.49269089725	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104126	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48110169_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.16	chr16	+	1729	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-13	288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	185.027400373266	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCTTCAGAGGACTG	NA	False	NA	NA	False	AATAAA	-17	NA	48104136	48114888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111679_48113273_48113470_48114061
ES.13794.17	chr16	+	2145	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	234.245182566378	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104159	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108353_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.18	chr16	+	2991	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	10	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	185.027400373266	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGTTAAATTTCCCCT	NA	False	NA	48	True	ACTAAA	-30	NA	48104159	48114625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48112614_48112660_48113470_48114061
ES.13794.2	chr16	+	2085	9	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	240.628733737266	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104088	48114601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48109964_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.20	chr16	+	1529	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	13	-271	13	271	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGAACGCACTTGCTTG	NA	False	NA	NA	False	CATAAA	-13	NA	48104162	48114871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
ES.13794.21	chr16	+	2041	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	241.987201222617	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGGCTTTTGTTTT	NA	False	NA	21	True	ACTAAA	-3	NA	48104162	48114598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109464_48109690_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.22	chr16	+	3130	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	13	-4	intron_retention	FALSE	canonical	3	40	junction_3	225.579562214508	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGGCTTTTGTT	NA	False	NA	19	True	ACTAAA	-1	NA	48104162	48114596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48111678_48113273_48113470_48114061
ES.13794.23	chr16	+	1712	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	224.997687062942	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGCTTGTGGCTTTT	NA	False	NA	16	True	NA	NA	NA	48104163	48114593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48110169_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.24	chr16	+	1782	10	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	243.216765585205	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104163	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48109960_48110191_48110421_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.25	chr16	+	1604	9	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	246.901296067882	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGCTTGTGGCTTT	NA	False	NA	15	True	NA	NA	NA	48104171	48114592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48110535_48110658_48111376_48111678_48113273_48113470_48114061
ES.13794.26	chr16	+	1503	9	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	245.978879936876	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGCTTGTGGCTTT	NA	False	NA	15	True	NA	NA	NA	48104171	48114592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48110169_48110191_48111376_48111678_48113273_48113470_48114061
ES.13794.27	chr16	+	1775	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	23	286	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCTCCTTCAGAGGAC	NA	False	NA	NA	False	AATAAA	-15	NA	48104172	48114886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ES.13794.28	chr16	+	1315	5	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	4089	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	234.688090878084	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGCTTGTGGCTTT	NA	False	NA	15	True	NA	NA	NA	48108238	48114592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48108359_48109401_48109569_48111376_48111678_48113273_48113470_48114061
ES.13794.29	chr16	+	1201	5	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	5298	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.434088788463	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48109447	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48109562_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ES.13794.3	chr16	+	2233	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-6	12	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	181.921839138559	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTTATCTGAATGG	NA	False	NA	35	True	ACTAAA	-17	NA	48104089	48114612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
ES.13794.30	chr16	+	3351	2	NIC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	6509	1	intron_retention	FALSE	canonical	3	460	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48110658	48114601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48113470_48114061
ES.13794.31	chr16	+	1723	3	NNC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	6534	6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	287	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTGTTTTTGTTATCT	NA	False	NA	29	True	ACTAAA	-11	NA	48110683	48114606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48111678_48113273_48113458_48114061
ES.13794.4	chr16	+	3119	6	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	432	junction_3	59.3464404998312	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104092	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48111678_48113273_48113470_48114061
ES.13794.5	chr16	+	1508	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	-4	-25	-2	25	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGTTAAATTTCCCCT	NA	False	NA	48	True	ACTAAA	-30	NA	48104093	48114625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ES.13794.6	chr16	+	1255	3	ISM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	-2	4171	0	1890	intron_retention	FALSE	canonical	3	541	junction_2	1	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTAAGAACTTCAAGAAC	NA	False	NA	NA	False	NA	NA	NA	48104095	48110429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48104205_48108240_48108359_48109401
ES.13794.7	chr16	+	3238	5	NIC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	47.9713456138141	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104095	48114600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48104205_48108240_48108359_48109401_48111678_48113273_48113470_48114061
ES.13794.8	chr16	+	3012	6	NIC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	0	1	intron_retention	FALSE	canonical	2	9	junction_3	214.53447275438	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTTGTTTTTGT	NA	False	NA	24	True	ACTAAA	-6	NA	48104095	48114601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48104205_48108240_48108359_48109401_48109464_48109690_48111678_48113273_48113470_48114061
ES.13794.9	chr16	+	1580	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTATCTGAATGGTTAA	NA	False	NA	39	True	ACTAAA	-21	NA	48104097	48114616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ES.13795.1	chr16	-	2334	1	Antisense	novelGene_ENSMUSG00000058550.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAACAACTTTTGCACA	NA	False	NA	NA	False	NA	NA	NA	48111715	48109381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48109400_48111700
ES.13795.2	chr16	-	1306	1	Antisense	novelGene_ENSMUSG00000058550.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	48111715	48110409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48110400_48111700
ES.13796.1	chr16	+	1936	8	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	-38	-543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.815231722242	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGCTTTATCATGTAG	NA	False	NA	NA	False	AATATA	-15	NA	48124232	48139543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48124570_48130645_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.10	chr16	+	2520	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-40	-532	-40	532	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGAGTGCCTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	48130799	48140618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.11	chr16	+	2731	7	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	-30	-547	intron_retention	FALSE	non_canonical	0	0	junction_6	217.10321406086	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTATGGCTTTATCAT	NA	False	NA	NA	False	AATATA	-11	NA	48130809	48139539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995_48139290_48139359
ES.13796.12	chr16	+	999	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-3	952	-3	-952	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	48130836	48139134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.13	chr16	+	2366	6	NIC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	0	-952	intron_retention	FALSE	canonical	3	478	junction_4	53.1766866211125	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	48130839	48139134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995
ES.13796.14	chr16	+	1741	8	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	0	-163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.991965162969	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGTCTTGAGTATTTT	NA	False	NA	65	True	NA	NA	NA	48130839	48139923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131911_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.15	chr16	+	3013	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	-1065	0	1065	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCGCACGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	48130839	48141151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.16	chr16	+	1580	8	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	1	-297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.815231722242	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCATGTCCTCGATT	NA	False	NA	-69	True	NA	NA	NA	48130840	48139789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.18	chr16	+	1287	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	1	660	1	-660	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTGCTGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	48130840	48139426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.19	chr16	+	3151	6	NIC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	1	-166	intron_retention	FALSE	canonical	3	478	junction_4	53.1766866211125	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCTGGTCTTGAGTAT	NA	False	NA	62	True	NA	NA	NA	48130840	48139920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995
ES.13796.2	chr16	+	2364	9	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	-36	-104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.350233407643	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACACTCACCATCCCTG	NA	False	NA	124	True	TTTAAA	-28	NA	48124234	48139982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48124570_48125123_48125328_48130858_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.20	chr16	+	3054	7	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	1	-193	intron_retention	FALSE	non_canonical	0	0	junction_6	217.10321406086	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATCCAAGACAGGGTCT	NA	False	NA	35	True	NA	NA	NA	48130840	48139893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995_48139290_48139359
ES.13796.21	chr16	+	1119	7	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	154	-952	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	208.226972849874	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	48130993	48139134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48131180_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.22	chr16	+	1733	8	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	257	-165	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	251.783191476723	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGTCTTGAGTATT	NA	False	NA	63	True	NA	NA	NA	48131096	48139921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48131180_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.23	chr16	+	2801	6	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	931	-543	intron_retention	FALSE	canonical	0	0	junction_1	229.957039466071	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGCTTTATCATGTAG	NA	False	NA	NA	False	AATATA	-15	NA	48131770	48139543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48131860_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995
ES.13796.24	chr16	+	3108	7	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	932	-165	intron_retention	FALSE	non_canonical	0	0	junction_1	268.313663875365	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGTCTTGAGTATT	NA	False	NA	63	True	NA	NA	NA	48131771	48139921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48131860_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995_48139290_48139359
ES.13796.25	chr16	+	3177	6	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	943	-163	intron_retention	FALSE	non_canonical	0	0	junction_5	229.957039466071	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGTCTTGAGTATTTT	NA	False	NA	65	True	NA	NA	NA	48131782	48139923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48132074_48134245_48134398_48134491_48134546_48136024_48137847_48138995_48139290_48139359
ES.13796.26	chr16	+	1398	7	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	971	-544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	211.853264207931	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGGCTTTATCATGTA	NA	False	NA	NA	False	AATATA	-14	NA	48131810	48139542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.27	chr16	+	2121	6	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	3495	531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	215.883857664254	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTGAGTGCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	48134334	48140617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.28	chr16	+	2348	7	NNC	ENSMUSG00000072419.6	novel	1948	7	NA	NA	3524	2031	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	253.161125679982	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACTCACAGAGTCAGA	NA	False	NA	NA	False	AATAAA	-10	NA	48134363	48142117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359_48140519_48141762
ES.13796.29	chr16	+	3347	3	ISM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	5416	-2035	5416	2035	3prime_fragment	FALSE	canonical	3	525	junction_1	29	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCACAGAGTCAGAATTT	NA	False	NA	NA	False	AATAAA	-14	NA	48136255	48142121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48136281_48137650_48137847_48138995
ES.13796.3	chr16	+	1736	9	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	-33	-543	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	246.775707880658	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGCTTTATCATGTAG	NA	False	NA	NA	False	AATATA	-15	NA	48124237	48139543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48124439_48130639_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.4	chr16	+	2028	8	FSM	ENSMUSG00000072419.6	ENSMUST00000232448.2	2447	8	256	163	256	-163	multi-exon	FALSE	canonical	3	19	junction_1	195.358069989965	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGTCTTGAGTATTTT	NA	False	NA	65	True	NA	NA	NA	48124526	48139923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48124570_48130639_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.5	chr16	+	145	1	Intergenic	novelGene_11572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48127594	48127739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48127600_48127700
ES.13796.6	chr16	+	2933	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-1150	165	-1150	-165	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGTCTTGAGTATT	NA	False	NA	63	True	NA	NA	NA	48129689	48139921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13796.7	chr16	+	2050	8	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	-331	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.815231722242	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTGAGTATTTTAATT	NA	False	NA	69	True	NA	NA	NA	48130508	48139927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.8	chr16	+	1663	8	NNC	ENSMUSG00000072419.6	novel	2447	8	NA	NA	-331	-546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.815231722242	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATGGCTTTATCATG	NA	False	NA	NA	False	AATATA	-12	NA	48130508	48139540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995_48139290_48139359
ES.13796.9	chr16	+	1691	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	-40	297	-40	-297	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCATGTCCTCGATT	NA	False	NA	-69	True	NA	NA	NA	48130799	48139789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ES.13797.1	chr16	+	226	1	Intergenic	novelGene_11573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTGGGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	48150214	48150440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48150200_48150400
ES.13798.1	chr16	-	161	1	Intergenic	novelGene_11574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATCTATTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	48195523	48195362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48195400_48195500
ES.13799.1	chr16	+	197	1	Intergenic	novelGene_11575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48201531	48201728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48201500_48201700
ES.138.1	chr1	+	2032	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2443	11	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	308.297275369083	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTGAGTTTTCTGAAG	NA	False	NA	62	True	TATAAA	-22	NA	15873426	15913705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15873599_15875706_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.10	chr1	+	1684	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-9	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319.266559167209	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTCTATTCCATGTC	NA	False	NA	15	True	ATTAAA	-20	NA	15875860	15913658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883239_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.11	chr1	+	2134	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	134	0	-134	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAACCTATTGAAATAT	NA	False	NA	NA	False	NA	NA	NA	15875869	15914142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.12	chr1	+	3325	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	2	-42	intron_retention	FALSE	canonical	3	905	junction_6	72.6666188837763	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGGTTTGTTCTATTC	NA	False	NA	9	True	ATTAAA	-14	NA	15875871	15913652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.13	chr1	+	1558	9	FSM	ENSMUSG00000025925.15	ENSMUST00000027057.8	1581	9	-16	39	2	-39	multi-exon	FALSE	canonical	3	29	junction_3	336.315978656977	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15875871	15913655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.14	chr1	+	9712	6	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	2	-43	intron_retention	FALSE	canonical	3	29	junction_5	410.484299334335	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACGGTTTGTTCTATT	NA	False	NA	8	True	ATTAAA	-13	NA	15875871	15913651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15889988_15901730_15901791_15908405
ES.138.15	chr1	+	1354	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	4	910	4	-328	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTTTACAATTTCC	NA	False	NA	3	True	GATAAA	-14	NA	15875873	15913366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.16	chr1	+	3281	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	5	1289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	425.371994063236	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAGAACGAATAGTA	NA	False	NA	NA	False	NA	NA	NA	15875874	15915565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144_15915023_15915206
ES.138.17	chr1	+	1488	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2	-39	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	342.71651459333	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15875878	15913655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.18	chr1	+	2395	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	11	-138	0	138	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGGCTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	15875880	15914414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.19	chr1	+	2816	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	1	-7	intron_retention	FALSE	canonical	3	905	junction_6	69.3116828175453	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTAGACCAAAGCTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	15875881	15914269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.2	chr1	+	1994	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2427	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	310.056269086758	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGGTTTGTTCTATTC	NA	False	NA	9	True	ATTAAA	-14	NA	15873442	15913652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15873599_15875675_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.20	chr1	+	5160	8	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	1	-42	intron_retention	FALSE	canonical	3	905	junction_5	63.8320500394974	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGGTTTGTTCTATTC	NA	False	NA	9	True	ATTAAA	-14	NA	15875881	15913652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.22	chr1	+	1589	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	2	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	322.631005069412	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTTTGTTCTATTCCATG	NA	False	NA	13	True	ATTAAA	-18	NA	15875882	15913656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889965_15901753_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.23	chr1	+	3119	8	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	2	-3097	combination_of_known_splicesites	FALSE	canonical	3	29	junction_7	349.378924168389	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGCCTTTCAGAAGTA	NA	False	NA	NA	False	TATAAA	-22	NA	15875882	15910597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15908405
ES.138.24	chr1	+	2247	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	3	8	intron_retention	FALSE	canonical	3	905	junction_6	69.3116828175453	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCATTGAGTTTTCTG	NA	False	NA	59	True	TATAAA	-19	NA	15875883	15913702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.25	chr1	+	1585	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-3	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	326.878653816654	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACGGTTTGTTCTATTCC	NA	False	NA	10	True	ATTAAA	-15	NA	15875884	15913653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889263_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.26	chr1	+	1599	9	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-3	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	342.171717672574	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACGGTTTGTTCTATT	NA	False	NA	8	True	ATTAAA	-13	NA	15875884	15913651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15903593_15903714_15908405_15908513_15913144
ES.138.29	chr1	+	1124	8	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	-10524	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_7	355.582993555826	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	15875887	15903170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15902968
ES.138.3	chr1	+	1468	10	NNC	ENSMUSG00000025925.15	novel	2908	5	NA	NA	-2404	-39	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	314.208706294258	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTTTGTTCTATTCCAT	NA	False	NA	12	True	ATTAAA	-17	NA	15873465	15913655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15873599_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.30	chr1	+	2376	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	402.468247194732	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCATCTTGAATCA	NA	False	NA	NA	False	AATAAA	-28	NA	15875888	15914280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15882968_15883092_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.31	chr1	+	1701	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	471.9941148409	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875888	15913694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15882968_15883092_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15908405_15908513_15913144
ES.138.32	chr1	+	5354	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	1	3289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	310.349480424891	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAATTCATTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	15875888	15917565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144_15915023_15915206
ES.138.33	chr1	+	509	3	ISM	ENSMUSG00000025925.15	ENSMUST00000186565.7	968	7	8	8855	1	-8855	5prime_fragment	FALSE	canonical	3	1038	junction_1	37.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGAGTATTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	15875888	15883384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_15876182_15877864_15877961_15883264
ES.138.34	chr1	+	1634	10	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	2	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	326.878653816654	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTTTGTTCTATTCCATG	NA	False	NA	13	True	ATTAAA	-18	NA	15875889	15913656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889314_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.35	chr1	+	2867	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGATTTGTGTTTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	15886244	15889111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_15886200_15889100
ES.138.36	chr1	+	4197	1	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	25061	-6572	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	15902925	15907122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15902900_15907100
ES.138.37	chr1	+	166	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAACT	NA	False	NA	NA	False	NA	NA	NA	15904856	15905022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_15904900_15905000
ES.138.4	chr1	+	3302	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	-1658	624	-1658	-42	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGGTTTGTTCTATTC	NA	False	NA	9	True	ATTAAA	-14	NA	15874211	15913652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.5	chr1	+	2425	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-39	1289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	310.349480424891	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAGAACGAATAGTA	NA	False	NA	NA	False	NA	NA	NA	15875830	15915565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144_15913994_15915164
ES.138.6	chr1	+	1518	8	ISM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	-13	10087	-13	-9505	5prime_fragment	FALSE	canonical	3	905	junction_7	71.4891171966127	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGCTATACTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	15875856	15904189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624
ES.138.7	chr1	+	2291	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	-11	-12	-11	12	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTTGAATCAGAATAGGA	NA	False	NA	NA	False	AATAAA	-36	NA	15875858	15914288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ES.138.8	chr1	+	1568	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-9	-38	combination_of_known_splicesites	FALSE	canonical	3	29	junction_7	334.131710557379	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTTTGTTCTATTCCATG	NA	False	NA	13	True	ATTAAA	-18	NA	15875860	15913656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15908405_15908513_15913144
ES.138.9	chr1	+	3391	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-9	1298	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	310.349480424891	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAATAGTATGTTTGAAG	NA	False	NA	NA	False	NA	NA	NA	15875860	15915574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144_15915023_15915206
ES.1380.1	chr1	-	8173	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	1	-5431	1	5431	multi-exon	FALSE	canonical	3	77	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTACCTTGCCACATTC	NA	False	NA	NA	False	AATAAA	-14	NA	134006857	133997476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134005442_134006649
ES.1380.2	chr1	-	2589	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	1	153	1	-153	multi-exon	FALSE	canonical	3	77	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAAGGTGGAATTCCAT	NA	False	NA	-3	True	AATAAA	-24	NA	134006857	134003060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134005442_134006649
ES.1380.3	chr1	-	2104	3	NNC	ENSMUSG00000020423.7	novel	2743	2	NA	NA	3	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTAGAGAAGGTGGA	NA	False	NA	-10	True	AATAAA	-17	NA	134006855	134003067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134004665_134005140_134005442_134006649
ES.1380.4	chr1	-	1036	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	1	1706	1	-1706	multi-exon	FALSE	canonical	3	77	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCTCTTTTGTTTTTC	NA	False	NA	-6	True	NA	NA	NA	134006857	134004613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134005442_134006649
ES.13800.1	chr16	+	3116	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-145	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	346.669982573569	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	NA	False	NA	22	True	AATAAA	-27	NA	48251454	48451274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251604_48251688_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.10	chr16	+	3331	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	13	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	372.718737924457	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251612	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.100	chr16	+	1097	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16951	33	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTAGCCTGATTCTT	646	False	NA	44	True	AAGAAA	-45	NA	48431980	48451296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.101	chr16	+	1389	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16952	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	647	False	NA	16	True	ATTAAA	-20	NA	48431981	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.102	chr16	+	4871	7	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16954	10	intron_retention	FALSE	canonical	3	194	junction_1	368.671036743237	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTTTGATTGCTA	649	False	NA	21	True	AATAAA	-26	NA	48431983	48451273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.103	chr16	+	917	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16995	7	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	690	False	NA	18	True	AATAAA	-23	NA	48432024	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.104	chr16	+	2645	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17014	1945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAAGGCCCGTCTGC	709	False	NA	9	True	AATAAA	-17	NA	48432043	48453208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.105	chr16	+	4790	2	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17020	-11768	intron_retention	FALSE	canonical	3	194	junction_1	0	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	715	False	NA	NA	False	NA	NA	NA	48432049	48437379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651
ES.13800.106	chr16	+	4162	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17022	3360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTGTTGTGAACCTC	717	False	NA	NA	False	AATAAA	-17	NA	48432051	48454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.107	chr16	+	1470	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17028	784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATTTACTGATAAATGT	723	False	NA	NA	False	ACTAAA	-20	NA	48432057	48452047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.108	chr16	+	972	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	509.850223104786	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	724	False	NA	18	True	AATAAA	-23	NA	48432058	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432287_48432377_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.109	chr16	+	910	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	423.997862612537	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCTTTTAGAAAACAT	724	False	NA	5	True	AATAAA	-10	NA	48432058	48451257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432181_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.11	chr16	+	5189	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	18	2353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTAATTGGAAATCCTT	NA	False	NA	NA	False	AATATA	-42	NA	48251617	48453616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.110	chr16	+	1507	10	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	555.355541772816	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	724	False	NA	16	True	ATTAAA	-20	NA	48432058	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432181_48432377_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.111	chr16	+	9344	10	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	9048	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	498.698082789354	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTGTGGGTATATT	724	False	NA	NA	False	TATAAA	-22	NA	48432058	48460311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759_48455836_48456334
ES.13800.112	chr16	+	1422	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	724	False	NA	16	True	ATTAAA	-20	NA	48432058	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.113	chr16	+	4048	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17029	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	472.316746871207	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	724	False	NA	NA	False	AATAAA	-20	NA	48432058	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.114	chr16	+	1339	10	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	498.323436046891	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTTGATGTATAATG	733	False	NA	12	True	ATTAAA	-16	NA	48432067	48451886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432181_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.115	chr16	+	5315	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	619	intron_retention	FALSE	non_canonical	0	0	junction_7	444.03948160551	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTATTTTGATGTAT	733	False	NA	8	True	ATTAAA	-12	NA	48432067	48451882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.116	chr16	+	1482	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17048	625	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTGATGTATAATGTG	743	False	NA	14	True	ATTAAA	-18	NA	48432077	48451888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.117	chr16	+	1424	3	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17051	-11770	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	479.5	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	746	False	NA	NA	False	NA	NA	NA	48432080	48437377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432112_48432651_48432725_48436057
ES.13800.119	chr16	+	944	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17071	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	445.176598757878	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTTTGATTGCTA	766	False	NA	21	True	AATAAA	-26	NA	48432100	48451273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451077
ES.13800.12	chr16	+	3019	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	29	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	333.696796171536	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	NA	False	NA	22	True	AATAAA	-27	NA	48251628	48451274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432714_48436054_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.120	chr16	+	3411	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17071	3363	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	424.555061211146	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	766	False	NA	NA	False	AATAAA	-20	NA	48432100	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451612_48452507
ES.13800.121	chr16	+	798	6	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17082	7	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_4	477.252302246935	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	777	False	NA	18	True	AATAAA	-23	NA	48432111	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48447275_48447471_48451067
ES.13800.122	chr16	+	1784	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17130	1090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATTTAAGGGTTTTTT	825	False	NA	NA	False	NA	NA	NA	48432159	48452353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.123	chr16	+	3122	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17135	3131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATCAGTGTCATCATT	830	False	NA	NA	False	AATATA	-33	NA	48432164	48454394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451619_48452507
ES.13800.125	chr16	+	988	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17164	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	510.585677800504	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTTTGATTGCTA	859	False	NA	21	True	AATAAA	-26	NA	48432193	48451273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48450806_48450934_48451067
ES.13800.126	chr16	+	993	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17184	7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	410.646429177119	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	879	False	NA	18	True	AATAAA	-23	NA	48432213	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432377_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.127	chr16	+	4975	1	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17373	-11770	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	672	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	1068	False	NA	NA	False	NA	NA	NA	48432402	48437377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48432400_48437400
ES.13800.128	chr16	+	1036	7	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	180846	-7	17416	7	3prime_fragment	FALSE	canonical	3	1153	junction_1	21.2948872319677	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	1111	False	NA	18	True	AATAAA	-23	NA	48432445	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.129	chr16	+	4359	6	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17430	11	intron_retention	FALSE	canonical	3	1154	junction_5	18.808508712814	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	1125	False	NA	22	True	AATAAA	-27	NA	48432459	48451274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.13	chr16	+	3072	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251630	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48413016_48432637_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.130	chr16	+	9323	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17474	9042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	511.792545251492	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGTGTATGTGTGGG	1169	False	NA	NA	False	TATAAA	-16	NA	48432503	48460305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759_48455836_48456334
ES.13800.131	chr16	+	7327	3	Intergenic	novelGene_11582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTGGTGGACATAGC	NA	False	NA	NA	False	NA	NA	NA	48453475	48461367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48455836_48456334_48461166_48461231
ES.13800.14	chr16	+	5873	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	32	3051	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAAAGAGTCCTTGTT	NA	False	NA	NA	False	TATAAA	-39	NA	48251631	48454314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.15	chr16	+	2154	19	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	32	43696	32	25564	5prime_fragment	FALSE	canonical	3	387	junction_7	38.3631124266753	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCATGTGGTAAAGGT	NA	False	NA	NA	False	AATATA	-21	NA	48251631	48407567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255
ES.13800.16	chr16	+	3507	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	33	686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCCCCTGAATTGTG	NA	False	NA	75	True	NA	NA	NA	48251632	48451949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.17	chr16	+	1623	14	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	34	115934	34	-46674	5prime_fragment	FALSE	canonical	3	387	junction_7	39.2548945427463	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTAGTTCATATTGAT	NA	False	NA	NA	False	NA	NA	NA	48251633	48335329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948
ES.13800.18	chr16	+	3407	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	36	628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	362.486092633273	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGTATAATGTGCCT	NA	False	NA	17	True	ATTAAA	-21	NA	48251635	48451891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381936_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.19	chr16	+	2984	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	37	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.504442609065	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	NA	False	NA	22	True	AATAAA	-27	NA	48251636	48451274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.2	chr16	+	3048	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-40	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	346.669982573569	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCCTGATTCTTATT	NA	False	NA	47	True	AAAACA	-24	NA	48251559	48451299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251616_48251688_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.20	chr16	+	4767	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	40	1953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCGTCTGCTGAGTTAC	NA	False	NA	17	True	AATAAA	-25	NA	48251639	48453216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.21	chr16	+	3086	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	41	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	341.314794217471	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	NA	False	NA	16	True	AATAAA	-21	NA	48251640	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407503_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48439813_48439890_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.22	chr16	+	2974	21	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	42	33385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	137.568164921976	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCGTTCCCAGTTATC	NA	False	NA	NA	False	TTTAAA	-32	NA	48251641	48415388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48414594
ES.13800.25	chr16	+	4430	19	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	47	33385	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	144.68377608332	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCGTTCCCAGTTATC	NA	False	NA	NA	False	TTTAAA	-32	NA	48251646	48415388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876
ES.13800.26	chr16	+	3186	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	47	-188	47	188	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTTGCTTGATTTGG	NA	False	NA	NA	False	AAAAAG	-17	NA	48251646	48451451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.27	chr16	+	2750	15	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	52	-18519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	121.232025808499	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATCCTGTAGCAGCGTC	NA	False	NA	NA	False	NA	NA	NA	48251651	48363484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48362113
ES.13800.28	chr16	+	3326	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	52	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	368.03686784706	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251651	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48407255_48407492_48412900_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.29	chr16	+	3620	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	52	-627	52	627	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251651	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.3	chr16	+	11315	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-16	9046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	361.815976840982	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATGTGTGGGTATA	NA	False	NA	NA	False	TATAAA	-20	NA	48251583	48460309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759_48455836_48456334
ES.13800.31	chr16	+	5030	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	52	2330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAATTTATTTTGTTA	NA	False	NA	NA	False	AATATA	-19	NA	48251651	48453593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.33	chr16	+	3250	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	56	621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	325.746905434265	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTATTTTGATGTATAA	NA	False	NA	10	True	ATTAAA	-14	NA	48251655	48451884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.38	chr16	+	3060	25	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	61	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	381.448327285478	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251660	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.39	chr16	+	3475	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	61	784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATTTACTGATAAATGT	NA	False	NA	NA	False	ACTAAA	-20	NA	48251660	48452047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.4	chr16	+	6229	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-12	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	48251587	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.43	chr16	+	3081	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.044694356136	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251662	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269572_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.45	chr16	+	2983	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	330.04886001924	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251662	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447281_48447471_48451067
ES.13800.46	chr16	+	2852	25	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	361.689006606504	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251662	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.49	chr16	+	2863	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.449208724048	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251662	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.5	chr16	+	3087	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	-8	-34	-8	34	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAGCCTGATTCTTA	NA	False	NA	45	True	AAAACA	-22	NA	48251591	48451297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.50	chr16	+	3411	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	361.832946168235	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251662	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378738_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.51	chr16	+	6017	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	372.718737924457	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	48251662	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.52	chr16	+	3248	22	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	-11737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	134.261058189006	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGATAGACAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	48251662	48437410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432842_48436511
ES.13800.53	chr16	+	5983	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	373.707277959635	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	48251662	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.54	chr16	+	3384	19	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	63	42435	63	26825	5prime_fragment	FALSE	canonical	3	387	junction_7	38.3631124266753	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAGGTATGCAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	48251662	48408828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255
ES.13800.57	chr16	+	2787	20	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	74	26658	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	105.570866039039	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTATTTTTGTTTTTAA	NA	False	NA	NA	False	TATAAA	-22	NA	48251673	48408661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48408165_48408583
ES.13800.58	chr16	+	4690	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	74	1945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	367.021324130988	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAAGGCCCGTCTGC	NA	False	NA	9	True	AATAAA	-17	NA	48251673	48453208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.59	chr16	+	3046	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	78	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251677	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432579_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.6	chr16	+	3384	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-5	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251594	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.60	chr16	+	3565	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	343.504695738665	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTGATAAATGTATTA	NA	False	NA	NA	False	ACTAAA	-24	NA	48251678	48452051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407503_48412876_48412979_48432651_48432725_48436056_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.61	chr16	+	3061	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.880161363633	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251678	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251854_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.62	chr16	+	3453	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	361.815976840982	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	NA	False	NA	16	True	ATTAAA	-20	NA	48251678	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48413016_48432637_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.63	chr16	+	6625	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	619	intron_retention	FALSE	non_canonical	0	0	junction_19	338.767800122739	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTATTTTGATGTAT	NA	False	NA	8	True	ATTAAA	-12	NA	48251678	48451882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.64	chr16	+	3778	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	1003	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGACAATAAGATAATTAC	NA	False	NA	NA	False	TTTAAA	-28	NA	48251678	48452266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.65	chr16	+	3235	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	79	538	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	362.486092633273	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCACTGATTGCTTTTT	NA	False	NA	-73	True	NA	NA	NA	48251678	48451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381936_48382004_48385940_48386080_48402779_48402849_48407255_48407487_48412900_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.66	chr16	+	3699	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	81	1028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTCTTGTTATTCAG	NA	False	NA	NA	False	NA	NA	NA	48251680	48452291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.67	chr16	+	6085	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	3348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	367.021324130988	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATAAAAAGAAATCAGT	NA	False	NA	NA	False	AATAAA	-5	NA	48251681	48454611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.69	chr16	+	4581	26	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	1945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	372.718737924457	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAAGGCCCGTCTGC	NA	False	NA	9	True	AATAAA	-17	NA	48251681	48453208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451758
ES.13800.7	chr16	+	6120	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-5	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	351.484057816864	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	48251594	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.70	chr16	+	2798	20	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	26825	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	105.570866039039	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAGGTATGCAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	48251681	48408828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407900_48408466
ES.13800.71	chr16	+	6766	20	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	-11768	intron_retention	FALSE	canonical	0	0	junction_19	105.570866039039	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48251681	48437379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651
ES.13800.72	chr16	+	6333	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	3561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	346.731012546799	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCCTGCTGTGCATCT	NA	False	NA	NA	False	TTTAAA	-4	NA	48251681	48454824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.73	chr16	+	4198	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	1461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	367.021324130988	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATGACGCTTAATCT	NA	False	NA	NA	False	NA	NA	NA	48251681	48452724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.74	chr16	+	4540	20	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	82	35885	82	33375	5prime_fragment	FALSE	canonical	0	0	junction_19	105.570866039039	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCATGATCCTTCGTT	NA	False	NA	NA	False	TTTAAA	-22	NA	48251681	48415378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876
ES.13800.75	chr16	+	1759	15	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	446.52705199491	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTTTTGATTG	NA	False	NA	18	True	AATAAA	-23	NA	48251681	48451270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.76	chr16	+	6186	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	82	3363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	361.815976840982	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTGTGAACCTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	48251681	48454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48413016_48432637_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.77	chr16	+	11298	29	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	99	9042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	356.633987472322	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGTGTATGTGTGGG	NA	False	NA	NA	False	TATAAA	-16	NA	48251698	48460305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759_48455836_48456334
ES.13800.8	chr16	+	2960	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-4	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	338.451806909049	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGATTGCTATTG	NA	False	NA	24	True	AATAAA	-29	NA	48251595	48451276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.80	chr16	+	3079	28	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	104	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	341.928678017039	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTTTTGATTGCTAT	NA	False	NA	22	True	AATAAA	-27	NA	48251703	48451274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48450806_48450934_48451067
ES.13800.81	chr16	+	1961	1	Intergenic	novelGene_11576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAAAACACTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	48259999	48261960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48260000_48262000
ES.13800.82	chr16	+	2730	21	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	-18907	623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	413.646984154363	743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTTGATGTATAATG	NA	False	NA	12	True	ATTAAA	-16	NA	48281087	48451886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335086_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.83	chr16	+	2333	20	NIC	ENSMUSG00000022652.8	novel	925	9	NA	NA	-25	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	400.493324597416	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAACATTTCCTTTTGA	NA	False	NA	15	True	AATAAA	-20	NA	48299969	48451267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48300044_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.84	chr16	+	3711	18	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17000	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	436.568317899698	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	6521	False	NA	16	True	AATAAA	-21	NA	48316994	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.85	chr16	+	2299	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17210	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	407.533850748834	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	6731	False	NA	16	True	AATAAA	-21	NA	48317204	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48317366_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407506_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.87	chr16	+	3663	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17212	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.178041077059	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGATTGCTATTGT	6733	False	NA	25	True	AATAAA	-30	NA	48317206	48451277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.88	chr16	+	3198	10	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17435	13480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	180.999761271243	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCATAATCATTCTTTT	6956	False	NA	NA	False	AATAAA	-20	NA	48317429	48395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48394471
ES.13800.89	chr16	+	3170	17	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17548	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	362.174660039876	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTAGAAAACATTTCCT	7069	False	NA	10	True	AATAAA	-15	NA	48317542	48451262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48447275_48447471_48451067
ES.13800.9	chr16	+	3440	27	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	2	623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	367.021324130988	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTTGATGTATAATG	NA	False	NA	12	True	ATTAAA	-16	NA	48251601	48451886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13800.90	chr16	+	3256	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17573	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.052586782938	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	7094	False	NA	11	True	AATAAA	-16	NA	48317567	48451263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319141_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.92	chr16	+	3852	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17636	627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.178041077059	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTATAATGTGCC	7157	False	NA	16	True	ATTAAA	-20	NA	48317630	48451890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.93	chr16	+	3118	20	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17848	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	437.824773003945	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	7369	False	NA	16	True	AATAAA	-21	NA	48317842	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48358852_48358953_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.94	chr16	+	2924	18	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17853	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	415.143365406254	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	7374	False	NA	16	True	AATAAA	-21	NA	48317847	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444639_48444707_48447275_48447471_48451067
ES.13800.95	chr16	+	2114	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	18271	-18519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.599851476929	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATCCTGTAGCAGCGTC	7792	False	NA	NA	False	NA	NA	NA	48318265	48363484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48318375_48318607_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48362113
ES.13800.96	chr16	+	5644	13	ISM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	123112	-10	-40318	10	3prime_fragment	FALSE	canonical	0	0	junction_5	427.855959666594	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTTTTGATTGCTA	NA	False	NA	21	True	AATAAA	-26	NA	48374711	48451273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.97	chr16	+	2831	1	Intergenic	novelGene_11579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCAGTTACTCACAATTA	NA	False	NA	NA	False	NA	NA	NA	48395432	48398263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_48395400_48398300
ES.13800.98	chr16	+	965	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16396	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.792169070022	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATTTCCTTTTGAT	91	False	NA	16	True	AATAAA	-21	NA	48431425	48451268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48431563_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ES.13800.99	chr16	+	3229	9	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	16547	1952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	424.555061211146	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCCGTCTGCTGAGTTA	242	False	NA	16	True	AATAAA	-24	NA	48431576	48453215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067_48451569_48451759
ES.13801.1	chr16	-	163	1	Intergenic	novelGene_11577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	48261085	48260922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48260900_48261100
ES.13802.1	chr16	-	3931	1	Intergenic	novelGene_11578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACCGAATCCAAGAACA	NA	False	NA	NA	False	NA	NA	NA	48317801	48313870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48313900_48317800
ES.13803.1	chr16	-	2929	1	Intergenic	novelGene_11580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTGTGTTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	48422148	48419219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48419200_48422100
ES.13803.2	chr16	-	1965	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTGTGTTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	48422128	48419219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48422006
ES.13803.3	chr16	-	2019	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48434266	48419246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48434063
ES.13803.4	chr16	-	747	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCTGTGAAGACTTC	NA	False	NA	0	True	AATAAA	-36	NA	48422152	48420461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48422006
ES.13803.5	chr16	-	689	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTGGCTGTGAAGAC	NA	False	NA	-3	True	AATAAA	-33	NA	48422133	48420464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48422042
ES.13803.6	chr16	-	802	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACTTTGGCTGTGAAG	NA	False	NA	-5	True	AATAAA	-31	NA	48422103	48420466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48421897
ES.13803.7	chr16	-	763	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTCACTTTGGCTGTGA	NA	False	NA	-7	True	AATAAA	-29	NA	48434232	48420468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48434063
ES.13803.8	chr16	-	1429	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATATAAA	NA	False	NA	-41	True	NA	NA	NA	48422128	48420502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48421063_48421259
ES.13803.9	chr16	-	1626	1	Intergenic	novelGene_11581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATATAAA	NA	False	NA	-41	True	NA	NA	NA	48422128	48420502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_48420500_48422100
ES.13804.1	chr16	-	2050	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGCTCCAACGTCATG	NA	False	NA	NA	False	NA	NA	NA	48453219	48450256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48451607_48452519
ES.13804.2	chr16	-	2964	1	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGCTCCAACGTCATG	NA	False	NA	NA	False	NA	NA	NA	48453220	48450256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_48450300_48453200
ES.13805.1	chr16	+	3320	15	Antisense	novelGene_ENSMUSG00000065667.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48746839	48766910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_48747708_48747903_48748006_48748091_48748219_48748658_48748779_48749977_48750121_48751533_48751653_48754147_48754259_48755861_48755950_48757332_48757435_48758794_48758894_48762014_48762084_48762438_48762566_48763818_48763915_48765124_48765297_48765933
ES.13806.1	chr16	+	3686	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	-166	454	-163	-400	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814384	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.10	chr16	+	3082	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	1	891	1	-837	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTAAGCCCTTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	48814551	48839177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.14	chr16	+	4371	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-402	intron_retention	FALSE	canonical	2	173	junction_10	26.0755348555987	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814551	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.15	chr16	+	3406	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-402	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	54.9806311903945	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814551	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.16	chr16	+	3917	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.5872962105552	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAGATCAGTACTTT	NA	False	NA	NA	False	AATAAA	-26	NA	48814551	48840071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831195_48833600_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.17	chr16	+	3371	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-400	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	52.7544880657592	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814551	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.19	chr16	+	3487	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	4	-402	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	53.1728079002793	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814554	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817855_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.2	chr16	+	4211	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	-158	-79	-155	75	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTGCTTCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	48814392	48840147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.22	chr16	+	4628	19	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	12	-400	intron_retention	FALSE	canonical	2	173	junction_9	24.3056666664127	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814562	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.26	chr16	+	3875	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	22	77	-13	-23	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTATTTCATTCA	NA	False	NA	NA	False	TATAAA	-13	NA	48814572	48839991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.27	chr16	+	4278	20	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-11	-404	intron_retention	FALSE	canonical	2	11	junction_8	53.5338968910679	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTTCTTTTGTTCTTT	NA	False	NA	16	True	ATTAAA	-17	NA	48814574	48839610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.28	chr16	+	4489	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-10	-396	intron_retention	FALSE	canonical	2	173	junction_10	25.9989345615921	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTCTTTGCTTTTTT	NA	False	NA	24	True	ATTAAA	-25	NA	48814575	48839618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48837855_48838737
ES.13806.29	chr16	+	4582	19	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-7	-405	intron_retention	FALSE	canonical	0	0	junction_7	56.938563381947	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAACTTTCTTTTGTTCTT	NA	False	NA	15	True	ATTAAA	-16	NA	48814578	48839609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824662_48824848_48826050_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.3	chr16	+	6639	19	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-20	0	intron_retention	FALSE	canonical	3	180	junction_7	21.6101827849743	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGATCAGTACTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	48814527	48840072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.31	chr16	+	5283	19	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	0	-399	intron_retention	FALSE	canonical	2	11	junction_6	55.5472493790669	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTTCTTTGCTTT	NA	False	NA	21	True	ATTAAA	-22	NA	48814585	48839615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.32	chr16	+	3860	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	55.2791956678479	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTTTAGATCAG	NA	False	NA	NA	False	AATAAA	-20	NA	48814586	48840065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.34	chr16	+	3361	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	-400	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	56.9195865689488	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814586	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.35	chr16	+	3981	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	1	70	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	52.8226040630335	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTAGTTTTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	48814586	48840142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.36	chr16	+	5657	18	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	57.7405604262645	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTTTAGATCAG	NA	False	NA	NA	False	AATAAA	-20	NA	48814587	48840065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48827555_48829440_48829541_48831071_48831191_48833537_48834439_48835255_48835453_48836304_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.37	chr16	+	2916	13	ISM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	39	7650	4	-1235	5prime_fragment	FALSE	canonical	2	173	junction_10	26.0366995262883	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	48814589	48832418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071
ES.13806.39	chr16	+	7027	19	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	4	0	intron_retention	FALSE	canonical	3	180	junction_8	23.393902867158	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGATCAGTACTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	48814589	48840072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.4	chr16	+	4489	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	-17	-498	-14	494	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTGTGTGCTCT	NA	False	NA	10	True	AATAAA	-22	NA	48814533	48840566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.40	chr16	+	5309	19	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	4	-400	intron_retention	FALSE	canonical	2	173	junction_8	26.7357900413622	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814589	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.41	chr16	+	3345	20	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	6	-402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.9828180353213	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814591	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821963_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.42	chr16	+	2833	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	7	-1018	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	53.1728079002793	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTATCATTTGTTT	NA	False	NA	6	True	AGTAAA	-20	NA	48814592	48838996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817855_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.43	chr16	+	3290	19	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	7	-402	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	56.083409003306	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814592	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.44	chr16	+	3454	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	7	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	54.9052820774104	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814592	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834443_48835283_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.45	chr16	+	4502	19	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	7	-400	intron_retention	FALSE	non_canonical	0	0	junction_14	83.5025873776701	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814592	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835254_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.47	chr16	+	3324	21	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	11	-402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	70.3146321898934	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814596	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834450_48835383_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.48	chr16	+	4271	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	46	-343	11	339	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATATTTACATTTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	48814596	48840411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.5	chr16	+	4735	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-10	-400	intron_retention	FALSE	canonical	3	180	junction_8	22.8226936679347	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814537	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.50	chr16	+	4662	20	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	16	-400	intron_retention	FALSE	canonical	2	173	junction_9	26.034071006771	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTGTTCTTTGCTT	NA	False	NA	20	True	ATTAAA	-21	NA	48814601	48839614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48814743_48817733_48817882_48819317_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.51	chr16	+	6501	19	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	34	-407	intron_retention	FALSE	canonical	3	11	junction_8	54.4701753255853	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAACTTTCTTTTGTTC	NA	False	NA	13	True	ATTAAA	-14	NA	48814619	48839607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.52	chr16	+	3782	20	ISM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	3181	2	3146	-2	3prime_fragment	FALSE	canonical	2	173	junction_9	25.3264557899617	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACATTTTAGATCAGT	763	False	NA	NA	False	AATAAA	-21	NA	48817731	48840066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.53	chr16	+	3774	20	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	3158	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	73.486162414988	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTTTAGATCAG	775	False	NA	NA	False	AATAAA	-20	NA	48817743	48840065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826210_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836427_48836641_48836725_48837714_48837855_48838737
ES.13806.54	chr16	+	3329	20	NNC	ENSMUSG00000033031.14	novel	3079	10	NA	NA	-3019	-403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.9681852078232	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTTCTTTTGTTCTTTG	1218	False	NA	17	True	ATTAAA	-18	NA	48818186	48839611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48818332_48819310_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.55	chr16	+	4351	18	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-2206	-402	intron_retention	FALSE	non_canonical	0	0	junction_8	57.2107135416491	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	113	False	NA	18	True	ATTAAA	-19	NA	48818999	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826208_48827408_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.56	chr16	+	4523	17	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-1073	0	intron_retention	FALSE	canonical	0	0	junction_12	58.4111237265643	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGATCAGTACTTTG	1246	False	NA	NA	False	AATAAA	-27	NA	48820132	48840072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835383_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.57	chr16	+	8496	12	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-353	-402	intron_retention	FALSE	canonical	3	203	junction_2	20.5534980232499	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	1966	False	NA	18	True	ATTAAA	-19	NA	48820852	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48821451_48821928_48822052_48822154_48822301_48824289_48824848_48826050_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.59	chr16	+	5094	6	NIC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-1328	-402	intron_retention	FALSE	canonical	3	209	junction_2	19.975985582694	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	8559	False	NA	18	True	ATTAAA	-19	NA	48827445	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48837855_48838737
ES.13806.6	chr16	+	3405	20	NNC	ENSMUSG00000033031.14	novel	3974	21	NA	NA	-10	-402	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	72.6101417639479	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTTTGTTCTTTGC	NA	False	NA	18	True	ATTAAA	-19	NA	48814537	48839612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_48814743_48817733_48817882_48819317_48819431_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824662_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.60	chr16	+	4334	6	ISM	ENSMUSG00000033031.14	ENSMUST00000130080.8	3079	10	5611	-2469	727	2411	3prime_fragment	FALSE	canonical	3	218	junction_4	17.749366185867	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTTATTCACAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	48834384	48842483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13806.9	chr16	+	2952	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	0	1022	0	-968	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTTTTATTTATTCT	NA	False	NA	1	True	AGTAAA	-13	NA	48814550	48839046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ES.13807.1	chr16	-	5157	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-173	-1653	51	6	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATGTATTCATCTT	4248	False	NA	-1	True	AATAAA	-24	NA	48814477	48744588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.10	chr16	-	7092	34	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.8543541404503	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4430	False	NA	-7	True	AATAAA	-18	NA	48814295	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48760401_48760527_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48792834_48792972_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.12	chr16	-	5638	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	28.277133056627	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4405	False	NA	-7	True	AATAAA	-18	NA	48814320	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778095_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.13	chr16	-	5516	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	28.4167595306401	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.14	chr16	-	4980	28	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	9369	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	29.5037139323589	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	NA	False	NA	-7	True	AATAAA	-18	NA	48804935	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792712_48801351_48801418_48802422_48802496_48804897
ES.13807.17	chr16	-	6263	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	27.4477272561802	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4430	False	NA	-7	True	AATAAA	-18	NA	48814295	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48771957_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.18	chr16	-	5734	33	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	33.0464723675236	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48792834_48792972_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.19	chr16	-	5636	33	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7977863732614	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4405	False	NA	-7	True	AATAAA	-18	NA	48814320	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747684_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.2	chr16	-	5873	33	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	77	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.8548717875286	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTATGTATTCATCT	4274	False	NA	-2	True	AATAAA	-23	NA	48814451	48744589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48760401_48760527_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.20	chr16	-	3812	3	ISM	ENSMUSG00000064061.14	ENSMUST00000139350.8	5835	7	8900	-2	65	0	3prime_fragment	FALSE	canonical	3	113	junction_1	4	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	NA	False	NA	-7	True	AATAAA	-18	NA	48750045	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_48748219_48748658_48748780_48749978
ES.13807.22	chr16	-	4864	30	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	30.1916588870102	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.23	chr16	-	5418	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	28.1867581203184	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4431	False	NA	-9	True	AATAAA	-16	NA	48814294	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.24	chr16	-	6233	30	NNC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	31.024634452723	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4400	False	NA	-9	True	AATAAA	-16	NA	48814325	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48768018_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.25	chr16	-	6995	33	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	33.8016820726055	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4400	False	NA	-9	True	AATAAA	-16	NA	48814325	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48792834_48792972_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.26	chr16	-	6431	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	56	0	intron_retention	FALSE	canonical	3	63	junction_18	19.9590970626318	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4253	False	NA	-9	True	AATAAA	-16	NA	48814472	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.27	chr16	-	615	5	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	11812	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	51.8169856321265	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	NA	False	NA	-9	True	AATAAA	-16	NA	48802492	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48744788_48798244_48798326_48799908_48800026_48801261_48801418_48802422
ES.13807.28	chr16	-	2227	2	NNC	ENSMUSG00000064061.14	novel	5835	7	NA	NA	3151	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	NA	False	NA	-9	True	AATAAA	-16	NA	48746959	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746714_48746849
ES.13807.29	chr16	-	6555	30	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	84	0	intron_retention	FALSE	canonical	3	44	junction_17	20.3164618152289	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4281	False	NA	-9	True	AATAAA	-16	NA	48814444	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.3	chr16	-	7017	32	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	51	5	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	21.2442316342938	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTATGTATTCATCT	4248	False	NA	-2	True	AATAAA	-23	NA	48814477	48744589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.30	chr16	-	4689	33	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8336997855118	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4426	False	NA	-9	True	AATAAA	-16	NA	48814299	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48745445_48746344_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.31	chr16	-	6376	31	NNC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.8545009005913	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4283	False	NA	-9	True	AATAAA	-16	NA	48814442	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747728_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.32	chr16	-	5475	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	28.4815729902686	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4420	False	NA	-9	True	AATAAA	-16	NA	48814305	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.33	chr16	-	7194	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	63	0	intron_retention	FALSE	canonical	3	63	junction_18	18.4121035070835	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4260	False	NA	-9	True	AATAAA	-16	NA	48814465	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.34	chr16	-	7334	11	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	-3427	0	intron_retention	FALSE	canonical	3	53	junction_1	28.1106741292343	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	9687	False	NA	-9	True	AATAAA	-16	NA	48762464	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48762084_48762438
ES.13807.36	chr16	-	5413	30	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	28.9709764970296	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4420	False	NA	-9	True	AATAAA	-16	NA	48814305	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763937_48768048_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.37	chr16	-	6246	31	NNC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	30.5890321665934	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4420	False	NA	-9	True	AATAAA	-16	NA	48814305	48744596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765318_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.41	chr16	-	4573	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3299491149623	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATCTATTTCTTTATGT	4420	False	NA	-10	True	AATAAA	-15	NA	48814305	48744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48745445_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.42	chr16	-	4964	31	NNC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	29.4964404632152	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATCTATTTCTTTATGT	4599	False	NA	-10	True	AATAAA	-15	NA	48814126	48744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48813985
ES.13807.44	chr16	-	5371	30	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	29.1081055270208	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCTATTTCTTTATG	4420	False	NA	-11	True	AATAAA	-14	NA	48814305	48744598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.45	chr16	-	5578	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	27.5823617651046	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATCTATTTCTTTATG	4420	False	NA	-11	True	AATAAA	-14	NA	48814305	48744598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757422_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.48	chr16	-	6628	30	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.2063469394202	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATCTATTTCTTTAT	4426	False	NA	-12	True	AATAAA	-13	NA	48814299	48744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.5	chr16	-	6955	30	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_25	27.9597553484267	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.50	chr16	-	6964	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	38.7781115512846	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAATATCTATTTCTTTA	4420	False	NA	-13	True	AATAAA	-12	NA	48814305	48744600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48768018_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48792834_48792972_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.52	chr16	-	5520	31	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	-3	-702	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTAAATACCTGTAAGT	4418	False	NA	NA	False	AATAAA	-16	NA	48814307	48745298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.53	chr16	-	4893	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	223	704	-1	-702	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTAAATACCTGTAAGT	4420	False	NA	NA	False	AATAAA	-16	NA	48814305	48745298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.54	chr16	-	3958	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	-1	-626	-1	626	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAGAGGTAATAAAAG	4420	False	NA	NA	False	AATAAA	-23	NA	48814305	48745615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.55	chr16	-	1550	12	NIC	ENSMUSG00000064061.14	novel	5835	7	NA	NA	-3475	-79	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	26.8635979079866	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTGTTTTCTTGGGGA	9639	False	NA	NA	False	AAGAAA	-13	NA	48762512	48747307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438
ES.13807.56	chr16	-	3818	1	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-2	-44584	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTGGTATTTGCCT	4419	False	NA	NA	False	TTTAAA	-24	NA	48814306	48810488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48810500_48814300
ES.13807.57	chr16	-	405	2	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	83	-44692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATATTTTGTTTTGC	4280	False	NA	NA	False	NA	NA	NA	48814445	48810596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48810709_48814152
ES.13807.58	chr16	-	3907	1	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	21	-44696	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTCCGATATTTTGTT	4218	False	NA	NA	False	NA	NA	NA	48814507	48810600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48810600_48814500
ES.13807.59	chr16	-	507	1	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-19	-47912	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGCACCGTTGAGAATT	4402	False	NA	NA	False	NA	NA	NA	48814323	48813816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48813800_48814300
ES.13807.6	chr16	-	5755	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	65	0	65	0	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4262	False	NA	-7	True	AATAAA	-18	NA	48814463	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.7	chr16	-	6388	31	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4254	False	NA	-7	True	AATAAA	-18	NA	48814471	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.8	chr16	-	5028	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	32.8581284874886	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765962_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48771957_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13807.9	chr16	-	6834	32	NNC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	29.2525691037135	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4420	False	NA	-7	True	AATAAA	-18	NA	48814305	48744594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780114_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ES.13808.1	chr16	+	1645	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-48	1004	-48	5	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGAAGTGTTCACTGG	NA	False	NA	23	True	AATAAA	-19	NA	49519547	49584485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ES.13808.2	chr16	+	1431	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	-22	1192	-22	-182	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGATTATTTCGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	49519573	49584297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ES.13808.5	chr16	+	3815	7	NNC	ENSMUSG00000032965.12	novel	2601	11	NA	NA	25	-13097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.2284771873312	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATAAGTTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	49519620	49571382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49568424
ES.13808.6	chr16	+	1505	11	NNC	ENSMUSG00000032965.12	novel	2601	11	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.5905340575713	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATCATGTTCAGAGA	NA	False	NA	11	True	AATAAA	-7	NA	49519629	49584473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49582985_49584104
ES.13809.1	chr16	+	1980	9	NIC	ENSMUSG00000055447.20	novel	1175	10	NA	NA	-199	669	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5090894069578	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49675529	49732123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49675761_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ES.13809.10	chr16	+	1246	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	68	2	57	-2	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49676075	49731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ES.13809.11	chr16	+	1275	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229101.2	1358	11	80	3	57	-3	multi-exon	FALSE	canonical	3	19	junction_2	27.0739727413618	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAATTGGAATCCCATT	NA	False	NA	16	True	AATAAA	-20	NA	49676075	49731441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
ES.13809.12	chr16	+	1477	10	ISM	ENSMUSG00000055447.20	ENSMUST00000230641.2	1032	12	13262	-870	2216	655	3prime_fragment	FALSE	canonical	3	21	junction_8	27.4023518860861	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAAAAAATCTACA	NA	False	NA	NA	False	TTTAAA	-3	NA	49689411	49732109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ES.13809.2	chr16	+	2248	9	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	-32	669	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49675696	49732123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ES.13809.3	chr16	+	1270	9	NIC	ENSMUSG00000055447.20	novel	1313	10	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49675993	49731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ES.13809.4	chr16	+	1904	8	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	1	657	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	27.9335947254505	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAATCTACAGT	NA	False	NA	NA	False	TTTAAA	-5	NA	49675996	49732111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49731231
ES.13809.5	chr16	+	1280	10	NIC	ENSMUSG00000055447.20	novel	1358	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	22.7107414625278	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49676008	49731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
ES.13809.6	chr16	+	1211	8	NIC	ENSMUSG00000055447.20	novel	1313	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	27.9335947254505	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49676020	49731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49731231
ES.13809.7	chr16	+	1987	10	FSM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	13	3250	2	669	multi-exon	FALSE	canonical	3	19	junction_2	24.0960014099978	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49676020	49732123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ES.13809.8	chr16	+	1982	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	13	-679	2	669	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49676020	49732123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ES.13809.9	chr16	+	1335	12	FSM	ENSMUSG00000055447.20	ENSMUST00000230641.2	1032	12	-100	-203	31	-2	multi-exon	FALSE	canonical	3	19	junction_2	27.2824225191312	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	False	NA	17	True	AATAAA	-21	NA	49676049	49731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ES.1381.1	chr1	+	1973	13	NNC	ENSMUSG00000026450.15	novel	1815	12	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.32812092461931	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTGACTTAAAGAAG	1467	False	NA	NA	False	AATAAA	-17	NA	134039010	134079277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134039101_134049917_134050108_134066378_134066511_134067997_134068028_134070977_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841
ES.1381.2	chr1	+	1755	10	NNC	ENSMUSG00000026450.15	novel	1815	12	NA	NA	4228	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.58198889747161	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTGTGACTTAAAGAA	4197	False	NA	NA	False	AATAAA	-16	NA	134070611	134079276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134070837_134070977_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841
ES.13810.1	chr16	-	3191	1	Antisense	novelGene_ENSMUSG00000055447.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAATGGTCCCCTTGCC	NA	False	NA	NA	False	NA	NA	NA	49731898	49728707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_49728700_49731900
ES.13810.2	chr16	-	2571	1	Antisense	novelGene_ENSMUSG00000055447.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACACAACACCAAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	49731898	49729327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_49729300_49731900
ES.13811.1	chr16	-	2014	1	Intergenic	novelGene_11583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATTCTTGTGTTA	1326	False	NA	NA	False	AGTAAA	-7	NA	49771451	49769437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_49769400_49771500
ES.13812.1	chr16	+	176	1	Intergenic	novelGene_11585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGGGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	50196273	50196449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50196300_50196400
ES.13813.1	chr16	+	157	1	Intergenic	novelGene_11586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACAATAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	50203223	50203380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50203200_50203400
ES.13814.1	chr16	-	8936	18	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	2	111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.5437860721569	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAAATATCAGTTAATG	9717	False	NA	NA	False	AATAAA	-15	NA	50252750	50012095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50109778_50109864_50151391_50151466_50249272_50249345_50252604
ES.13814.11	chr16	-	4783	17	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.36736376166177	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATAGAGGTTTGTTT	9725	False	NA	NA	False	NA	NA	NA	50252742	50016149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022749_50022939_50029447_50029508_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.12	chr16	-	4175	16	NIC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	-16	269	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	5.11815939137846	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGTTTCTGTTTCCTTT	9698	False	NA	NA	False	NA	NA	NA	50252769	50016709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.13	chr16	-	3913	16	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	0	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.87499408983154	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTCAGAAGTGACCTT	9715	False	NA	NA	False	TATAAA	-23	NA	50252752	50016957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.14	chr16	-	4095	17	NIC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	12	21	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	4.8541219597369	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTCAGAAGTGACCTT	9742	False	NA	NA	False	TATAAA	-23	NA	50252725	50016957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252473
ES.13814.15	chr16	-	3536	17	NIC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	6	-16	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	4.8541219597369	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAGAAAACCCT	9721	False	NA	NA	False	NA	NA	NA	50252746	50017537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252473
ES.13814.16	chr16	-	3380	1	Intergenic	novelGene_11584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50027627	50024247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_50024200_50027600
ES.13814.2	chr16	-	8743	17	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.13413819447821	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAAATACATTTCTTT	9717	False	NA	-1	True	AATAAA	-35	NA	50252750	50012206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.3	chr16	-	8652	16	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.87499408983154	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATATTATTCAAATACA	9720	False	NA	-8	True	AATAAA	-28	NA	50252747	50012213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.5	chr16	-	5361	17	FSM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	2	3380	1	556	multi-exon	FALSE	canonical	1	5	junction_15	4.24079886342184	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGTTAATATCTTACC	9716	False	NA	NA	False	NA	NA	NA	50252751	50015586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.6	chr16	-	4665	16	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.83323809446063	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGTTTTGTTTGTTG	9801	False	NA	NA	False	AAAACA	-3	NA	50252666	50016140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.7	chr16	-	4808	17	FSM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	-1	3936	-1	0	multi-exon	FALSE	canonical	1	5	junction_15	4.24079886342184	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTTTGTTTTGTTTGT	9713	False	NA	NA	False	AAAACA	-1	NA	50252754	50016142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ES.13814.8	chr16	-	4923	17	NNC	ENSMUSG00000022641.16	novel	8743	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.61805126356106	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGGTTTGTTTTGTTTG	9731	False	NA	NA	False	NA	NA	NA	50252736	50016143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040960_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252473
ES.13814.9	chr16	-	4799	18	NNC	ENSMUSG00000022641.16	novel	4024	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.90173278173365	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATAGAGGTTTGTTT	9715	False	NA	NA	False	NA	NA	NA	50252752	50016149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095039_50100731_50100903_50140662_50140777_50151391_50151466_50249272_50249345_50252604
ES.13815.1	chr16	-	1879	1	Intergenic	novelGene_11587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGAGCAAGTCATTA	9415	False	NA	NA	False	NA	NA	NA	50520147	50518268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_50518300_50520100
ES.13816.1	chr16	-	157	1	Intergenic	novelGene_11588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	50751859	50751702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_50751700_50751900
ES.13817.1	chr16	+	175	1	Intergenic	novelGene_11589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	50809938	50810113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50809900_50810100
ES.13818.1	chr16	+	314	1	Intergenic	novelGene_11591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTCATATGGCCACTTT	NA	False	NA	NA	False	ATTAAA	-9	NA	50812248	50812562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50812200_50812600
ES.13818.2	chr16	+	158	1	Intergenic	novelGene_11590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	50812248	50812406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50812200_50812400
ES.13819.1	chr16	+	4682	2	Intergenic	novelGene_11592	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCAGTGGAAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	50950009	50954903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_50950166_50950377
ES.1382.1	chr1	+	7833	1	Genic_Genomic	ENSMUSG00000064246.11	novel	NA	NA	NA	NA	-4085	-628	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6368	False	NA	NA	False	NA	NA	NA	134105828	134113661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_134105800_134113700
ES.1382.2	chr1	+	6375	7	NNC	ENSMUSG00000064246.11	novel	647	3	NA	NA	-4028	2	intron_retention	FALSE	canonical	0	0	junction_1	2.3392781412697	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTGCTATAATTGCGGC	6425	False	NA	NA	False	AATAAA	-15	NA	134105885	134117769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134108290_134110517_134111440_134111861_134111919_134112886_134113038_134114242_134116416_134116934_134117052_134117218
ES.13820.1	chr16	-	220	1	Intergenic	novelGene_11593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTATAATTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	51014170	51013950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_51014000_51014200
ES.13821.1	chr16	-	86	1	Intergenic	novelGene_11594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAAGATACT	NA	False	NA	NA	False	ATTAAA	-15	NA	51182615	51182529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_51182500_51182600
ES.13822.1	chr16	+	159	1	Intergenic	novelGene_11595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	51204302	51204461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_51204300_51204500
ES.13823.1	chr16	+	1811	1	Intergenic	novelGene_11596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51554750	51556561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_51554800_51556600
ES.13824.1	chr16	+	4486	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	309	1853	-29	682	multi-exon	TRUE	canonical	3	25	junction_15	12.7088776425873	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAATGCTTGAACCAC	NA	False	NA	NA	False	AATAAA	-12	NA	51851896	52026558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.10	chr16	+	2883	14	ISM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-40	21604	3	-21475	5prime_fragment	FALSE	canonical	3	40	junction_10	10.8992155409591	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTTTATTTTGCT	NA	False	NA	NA	False	AATACA	-13	NA	51851928	52004272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574
ES.13824.11	chr16	+	3649	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	342	2657	4	6	multi-exon	FALSE	canonical	3	25	junction_15	12.7088776425873	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCTCTTGTTAGTTTA	NA	False	NA	NA	False	AATAAA	-36	NA	51851929	52025754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.12	chr16	+	4569	19	NIC	ENSMUSG00000022637.12	novel	3728	19	NA	NA	12	685	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	18.3743648584276	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGCTTGAACCACATT	NA	False	NA	NA	False	AATAAA	-15	NA	51851937	52026561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.13	chr16	+	6181	3	FSM	ENSMUSG00000022637.12	ENSMUST00000226253.2	3930	3	-60	-2191	-21	2191	multi-exon	FALSE	canonical	3	43	junction_1	16.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTGGAATAAAAATGACA	NA	False	NA	NA	False	NA	NA	NA	51851947	51873459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561
ES.13824.16	chr16	+	6255	4	ISM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	30	152288	-13	2191	5prime_fragment	FALSE	canonical	3	23	junction_2	24.0970260959038	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTGGAATAAAAATGACA	NA	False	NA	NA	False	NA	NA	NA	51851955	51873459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561
ES.13824.17	chr16	+	6593	20	NNC	ENSMUSG00000022637.12	novel	3866	19	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.7868752540031	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGCCTTTTGTATGT	NA	False	NA	NA	False	TATAAA	-10	NA	51851956	52028404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006912_52009375_52009517_52014521_52014642_52024795
ES.13824.19	chr16	+	6530	20	NIC	ENSMUSG00000022637.12	novel	3866	19	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	17.7907193584424	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51851957	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.2	chr16	+	6450	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-52	-2534	-9	-1	multi-exon	FALSE	canonical	3	31	junction_16	12.3923761908006	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51851916	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.21	chr16	+	2518	13	ISM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-10	30702	-10	18150	5prime_fragment	FALSE	canonical	3	40	junction_10	11.034038245357	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTTCAGTGCCCAAG	NA	False	NA	NA	False	AATAAA	-25	NA	51851958	51995174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716
ES.13824.22	chr16	+	3871	20	NIC	ENSMUSG00000022637.12	novel	3866	19	NA	NA	-8	6	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	17.7907193584424	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCTCTTGTTAGTTTA	NA	False	NA	NA	False	AATAAA	-36	NA	51851960	52025754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.23	chr16	+	6233	19	NNC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.7288388902111	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGCCTTTTGTATGT	NA	False	NA	NA	False	TATAAA	-10	NA	51851977	52028404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986565_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.24	chr16	+	6219	19	NNC	ENSMUSG00000022637.12	novel	3728	19	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.8781699643196	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTTGTATGTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	51851983	52028407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986565_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.27	chr16	+	3965	18	NNC	ENSMUSG00000022637.12	novel	6648	18	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1725676373173	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCTTCTCTTGTTAG	NA	False	NA	NA	False	AATAAA	-32	NA	51851999	52025750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_51852439_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.28	chr16	+	5204	12	NIC	ENSMUSG00000022637.12	novel	6648	18	NA	NA	885	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	19.8623361338543	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51853464	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_52009375_52009517_52014521_52014642_52024795
ES.13824.29	chr16	+	5578	14	ISM	ENSMUSG00000022637.12	ENSMUST00000227756.2	3378	17	86104	-2657	-16769	-6	3prime_fragment	FALSE	canonical	3	31	junction_11	11.4654097746995	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTTTTGTATGTT	NA	False	NA	NA	False	TATAAA	-11	NA	51956119	52028405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.3	chr16	+	3788	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-46	122	-3	6	multi-exon	FALSE	canonical	3	31	junction_16	12.3923761908006	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCTCTTGTTAGTTTA	NA	False	NA	NA	False	AATAAA	-36	NA	51851922	52025754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.30	chr16	+	4634	9	NIC	ENSMUSG00000022637.12	novel	3378	17	NA	NA	-11519	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.3776838723148	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGCCTTTTGTATGT	NA	False	NA	NA	False	TATAAA	-10	NA	51961369	52028404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51961458_51963129_51963262_51972873_51973078_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.31	chr16	+	2444	10	ISM	ENSMUSG00000022637.12	ENSMUST00000227756.2	3378	17	102855	-2	-18	2	3prime_fragment	FALSE	canonical	3	31	junction_7	11.272166091531	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCTTCTCTTGTTAG	NA	False	NA	NA	False	AATAAA	-32	NA	51972870	52025750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.32	chr16	+	2104	8	ISM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	132732	-1	11769	0	3prime_fragment	FALSE	canonical	3	25	junction_5	12.5746749055231	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGAGCTTCTCTTGTT	NA	False	NA	NA	False	AATAAA	-30	NA	51984657	52025748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.33	chr16	+	4159	6	NIC	ENSMUSG00000022637.12	novel	3378	17	NA	NA	13763	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	25.2158680199592	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51986651	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52024795
ES.13824.34	chr16	+	2567	1	NIC	ENSMUSG00000022637.12	novel	6648	18	NA	NA	20730	19161	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	51993618	51996185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51993600_51996200
ES.13824.35	chr16	+	201	1	Intergenic	novelGene_11597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATTTCAATACAAATGG	NA	False	NA	NA	False	NA	NA	NA	52000892	52001093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_52000900_52001100
ES.13824.4	chr16	+	4600	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	-46	-690	-3	690	multi-exon	FALSE	canonical	3	31	junction_16	12.3923761908006	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAACCACATTTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	51851922	52026566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.5	chr16	+	6530	20	NIC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	15.1180030632521	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATGTTATTTTTCAA	NA	False	NA	NA	False	TATAAA	-20	NA	51851922	52028414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ES.13824.6	chr16	+	3756	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	-2	-26	-2	25	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGTGACCTTTAGGT	NA	False	NA	NA	False	TATAAA	-21	NA	51851923	52025773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.7	chr16	+	6395	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	-2	-2665	-2	1	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTATGTTATTTTTC	NA	False	NA	NA	False	TATAAA	-18	NA	51851923	52028412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.8	chr16	+	6432	19	NIC	ENSMUSG00000022637.12	novel	3728	19	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	18.3743648584276	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51851923	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13824.9	chr16	+	6307	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	340	1	2	-1	multi-exon	FALSE	canonical	3	25	junction_15	12.7088776425873	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGTATGTTATTTT	NA	False	NA	NA	False	TATAAA	-16	NA	51851927	52028410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ES.13825.1	chr16	-	154	1	Intergenic	novelGene_11598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATGAATAAACAAAC	8381	False	NA	NA	False	NA	NA	NA	52433988	52433834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_52433800_52434000
ES.13826.1	chr16	+	210	1	Intergenic	novelGene_11599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAATTTTCCTAGGATC	NA	False	NA	NA	False	NA	NA	NA	52842782	52842992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_52842800_52843000
ES.13827.1	chr16	+	249	1	Intergenic	novelGene_11600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTTAGTTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	53215400	53215649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_53215400_53215600
ES.13828.1	chr16	+	4838	1	Intergenic	novelGene_11601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	53392042	53396880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_53392000_53396900
ES.13829.1	chr16	-	3061	1	Intergenic	novelGene_11602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	54121845	54118784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_54118800_54121800
ES.1383.1	chr1	+	1541	10	ISM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	376	-2	367	1	3prime_fragment	TRUE	canonical	1	2	junction_2	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGGGTTTCTGTGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	134121561	134128971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
ES.1383.2	chr1	+	1538	8	NNC	ENSMUSG00000042451.13	novel	1828	11	NA	NA	3229	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	2.06031501455085	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGTTTCTGTGGCAATG	NA	False	NA	NA	False	AATAAA	-19	NA	134124423	134128974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128682
ES.13830.1	chr16	+	2585	1	Intergenic	novelGene_11603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATCATATACTTATTG	NA	False	NA	NA	False	ATTAAA	-15	NA	54255520	54258105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_54255500_54258100
ES.13831.1	chr16	+	177	1	Intergenic	novelGene_11604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	54415717	54415894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_54415700_54415900
ES.13832.1	chr16	+	176	1	Intergenic	novelGene_11605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	54970071	54970247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_54970100_54970200
ES.13833.1	chr16	-	163	1	Intergenic	novelGene_11606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55358032	55357869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55357900_55358000
ES.13834.1	chr16	+	158	1	Intergenic	novelGene_11607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAATAAATAAGTCT	NA	False	NA	NA	False	NA	NA	NA	55588994	55589152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55589000_55589200
ES.13835.1	chr16	-	1302	4	Intergenic	novelGene_11608	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7.07106781186548	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCAAGTGTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	55609222	55596658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55596986_55600214_55600325_55600813_55601569_55609112
ES.13836.1	chr16	-	3733	12	FSM	ENSMUSG00000035356.18	ENSMUST00000114458.8	3627	12	-106	0	-106	0	multi-exon	FALSE	canonical	1	2	junction_4	2.64418901313618	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTTTTCTAGTGCC	NA	False	NA	-10	True	AATAAA	-17	NA	55642607	55631737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55636827_55637193_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
ES.13836.2	chr16	-	3989	11	NIC	ENSMUSG00000035356.18	novel	3627	12	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2	junction_4	2.6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTTTTTCTTTTCTA	NA	False	NA	-15	True	AATAAA	-12	NA	55642501	55631742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
ES.13837.1	chr16	+	192	1	Antisense	novelGene_ENSMUSG00000035356.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAATCGTACTTTG	NA	False	NA	NA	False	NA	NA	NA	55645745	55645937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_55645700_55645900
ES.13838.1	chr16	+	157	1	Intergenic	novelGene_11609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATGTT	NA	False	NA	NA	False	NA	NA	NA	55668600	55668757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55668600_55668800
ES.13839.1	chr16	+	176	1	Intergenic	novelGene_11611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACAACTAAC	NA	False	NA	NA	False	NA	NA	NA	55702213	55702389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55702200_55702400
ES.1384.10	chr1	-	5829	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11778	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	17.3193992742488	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	134272444	134224522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260455_134272330
ES.1384.11	chr1	-	4564	20	NIC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	312	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_16	12.965755023295	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGGTGTCAGTTTCT	NA	False	NA	-2	True	AATAAA	-22	NA	134254692	134224522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.12	chr1	-	5090	11	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-5173	-2	intron_retention	FALSE	canonical	0	0	junction_9	24.3600082101792	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAATGGTGTCAGTTT	NA	False	NA	-4	True	AATAAA	-20	NA	134244509	134224524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134241145_134241367_134241462_134243144
ES.1384.13	chr1	-	4746	21	NNC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	279	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.0016963258028	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTACAAATGGTGTCA	NA	False	NA	-8	True	AATAAA	-16	NA	134254725	134224528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237553_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.15	chr1	-	4117	22	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-101	-249	intron_retention	FALSE	canonical	2	11	junction_1	13.4585952776682	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTGTCTCCATTATTT	NA	False	NA	NA	False	AAGAAA	-12	NA	134255105	134225487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995
ES.1384.16	chr1	-	5288	20	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	278	8	intron_retention	FALSE	canonical	0	0	junction_1	17.5120061703622	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGACTAATTGGCCT	NA	False	NA	2	True	AATAAA	-21	NA	134254726	134226110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226429_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.17	chr1	-	4604	29	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-11819	7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	17.7033376306646	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGACTAATTGGCC	NA	False	NA	1	True	AATAAA	-20	NA	134272485	134226111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
ES.1384.2	chr1	-	6573	5	NIC	ENSMUSG00000026458.14	novel	2955	7	NA	NA	-3232	4	intron_retention	FALSE	canonical	3	11	junction_1	25.30316185776	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCAGTTTCTTCCTTC	NA	False	NA	4	True	AATAAA	-28	NA	134235816	134224516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024
ES.1384.20	chr1	-	3552	21	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	293	6	intron_retention	FALSE	canonical	0	0	junction_19	15.4028406471014	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254711	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254062_134254357_134254553
ES.1384.21	chr1	-	5004	17	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	2688	6	intron_retention	FALSE	non_canonical	0	0	junction_10	17.1554246158467	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134252316	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244532_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248
ES.1384.22	chr1	-	2888	20	NNC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	321	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	16.0994141425728	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254683	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244858_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.23	chr1	-	3337	20	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	286	6	intron_retention	FALSE	canonical	0	0	junction_6	15.7866664171096	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134254718	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.24	chr1	-	3796	24	NIC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-1834	6	combination_of_known_splicesites	FALSE	canonical	2	8	junction_16	16.0418875139259	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134256838	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381
ES.1384.25	chr1	-	4474	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11801	6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	16.5805180934407	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGGACTAATTGGC	NA	False	NA	0	True	AATAAA	-19	NA	134272467	134226112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
ES.1384.26	chr1	-	6181	5	FSM	ENSMUSG00000026458.14	ENSMUST00000189862.7	2985	5	-4783	1587	2007	5	multi-exon	FALSE	canonical	3	39	junction_3	17.4499283666151	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTTGGACTAATTGG	NA	False	NA	-1	True	AATAAA	-18	NA	134237329	134226113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024
ES.1384.27	chr1	-	4781	28	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-11801	5	intron_retention	FALSE	canonical	2	6	junction_26	17.1637797724399	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTTGGACTAATTGG	NA	False	NA	-1	True	AATAAA	-18	NA	134272467	134226113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
ES.1384.28	chr1	-	3965	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11792	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5015477793939	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCTTGGACTAATTG	NA	False	NA	-2	True	AATAAA	-17	NA	134272458	134226114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226407_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260329_134272330
ES.1384.29	chr1	-	5276	19	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	316	4	intron_retention	FALSE	non_canonical	0	0	junction_15	14.5636110024986	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCTTGGACTAATTG	NA	False	NA	-2	True	AATAAA	-17	NA	134254688	134226114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248911_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.3	chr1	-	10484	17	NNC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	234	4	intron_retention	TRUE	non_canonical	0	0	junction_13	15.4049505030039	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCAGTTTCTTCCTTC	NA	False	NA	4	True	AATAAA	-28	NA	134254770	134224516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134227207_134228207_134231519_134232024_134232123_134237313_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248911_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.32	chr1	-	3998	26	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-1812	2	intron_retention	FALSE	canonical	1	2	junction_25	16.7401792105103	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGCTTGGACTAAT	NA	False	NA	-4	True	AATAAA	-15	NA	134256816	134226116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256718
ES.1384.34	chr1	-	4129	27	NNC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	-11792	1	intron_retention	FALSE	canonical	0	0	junction_26	17.2567198128215	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCTGCTTGGACTAA	NA	False	NA	-5	True	AATAAA	-14	NA	134272458	134226117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134272330
ES.1384.36	chr1	-	3152	20	NNC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	572	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.9285609927518	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTCCTGCTTGGACT	NA	False	NA	-7	True	AATAAA	-12	NA	134254432	134226119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232140_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134241046_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221
ES.1384.37	chr1	-	4220	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11796	-243	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	16.5805180934407	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCCGAGTCCTACTTCG	NA	False	NA	NA	False	NA	NA	NA	134272462	134226361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
ES.1384.4	chr1	-	5657	4	NIC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	-2167	0	intron_retention	FALSE	canonical	3	39	junction_2	19.6015872373189	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	680	False	NA	-1	True	AATAAA	-23	NA	134234751	134224521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134227207_134228207_134228277_134231342_134231519_134232024
ES.1384.5	chr1	-	3688	12	NIC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	-5498	0	intron_retention	FALSE	canonical	3	11	junction_1	15.7909902128026	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	134244834	134224521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800
ES.1384.6	chr1	-	6789	11	NNC	ENSMUSG00000026458.14	novel	4674	22	NA	NA	-5872	0	intron_retention	FALSE	non_canonical	0	0	junction_8	18.9897340687014	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	134245208	134224521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134239858_134240273_134240475_134240824_134240907_134241367_134241594_134243975_134244517_134244800_134244935_134245175
ES.1384.7	chr1	-	4823	22	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	257	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	14.4984165215603	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	134254747	134224521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134226567_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
ES.1384.8	chr1	-	5956	5	FSM	ENSMUSG00000026458.14	ENSMUST00000189862.7	2985	5	-2966	-5	-2928	0	multi-exon	FALSE	canonical	3	39	junction_3	17.4499283666151	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	134235512	134224521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024
ES.13840.1	chr16	+	173	1	Intergenic	novelGene_11612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	55709514	55709687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55709500_55709700
ES.13841.1	chr16	-	2874	6	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-88	-3252	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	2.24499443206436	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCATGACAAGTATTT	NA	False	NA	NA	False	AATAAA	-11	NA	55715736	55663567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55710944_55711175_55715650
ES.13841.2	chr16	-	1704	4	ISM	ENSMUSG00000075033.5	ENSMUST00000099705.5	6436	6	102	20002	102	-20002	5prime_fragment	FALSE	canonical	0	0	junction_3	4.08248290463863	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCCTTAATTCTG	NA	False	NA	NA	False	ATTAAA	-27	NA	55715546	55680317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55680743_55686158_55686914_55710944_55711213_55715290
ES.13841.3	chr16	-	1477	4	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-86	-20019	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	2.62466929133727	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCAGCTAGAGC	NA	False	NA	NA	False	ATTAAA	-10	NA	55715734	55680334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55680743_55686158_55686914_55710944_55711175_55715650
ES.13841.4	chr16	-	2616	3	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-81	-24291	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	55715729	55684606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55686914_55710944_55711175_55715650
ES.13841.5	chr16	-	1316	3	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-121	-25631	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	55715769	55685946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55686914_55710944_55711175_55715650
ES.13841.6	chr16	-	1305	3	NNC	ENSMUSG00000075033.5	novel	6436	6	NA	NA	-73	-25632	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2.5	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	55715721	55685947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55686914_55710944_55711213_55715650
ES.13841.7	chr16	-	9089	1	Intergenic	novelGene_11610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55696319	55687230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55687200_55696300
ES.13841.8	chr16	-	170	1	Intergenic	novelGene_11613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAGTAATCTCAG	NA	False	NA	NA	False	NA	NA	NA	55710134	55709964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55710000_55710100
ES.13842.1	chr16	+	201	1	Intergenic	novelGene_11614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55716363	55716564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55716400_55716600
ES.13843.1	chr16	+	618	1	Antisense	novelGene_ENSMUSG00000022604.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAGTACTATG	NA	False	NA	NA	False	NA	NA	NA	55720458	55721076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_55720500_55721100
ES.13844.1	chr16	-	7913	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	8	-10	7	10	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTATTTCAGTGATTA	NA	False	NA	9	True	AATAAA	-25	NA	55755210	55720240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.10	chr16	-	2482	6	ISM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	-23	20512	-23	3961	5prime_fragment	FALSE	canonical	3	32	junction_2	5.5281099844341	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCCCAATACTCAACAGT	NA	False	NA	NA	False	AATAAA	-16	NA	55755241	55740762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.11	chr16	-	634	5	FSM	ENSMUSG00000022604.19	ENSMUST00000121703.3	609	5	-29	4	-7	-4	multi-exon	FALSE	canonical	3	9	junction_1	14.2653426176871	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATAGTATCGAGTTT	NA	False	NA	NA	False	NA	NA	NA	55755225	55744922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55745043_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.2	chr16	-	7764	12	NNC	ENSMUSG00000022604.19	novel	7911	11	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.9958670568776	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTGGTTATTTCAGT	NA	False	NA	4	True	AATAAA	-20	NA	55755189	55720245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55722001_55722123_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.3	chr16	-	7887	11	NNC	ENSMUSG00000022604.19	novel	7911	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	12.1753850041795	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGATATCTGGTTATT	NA	False	NA	-1	True	AATAAA	-15	NA	55755175	55720250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748064_55748243_55750828_55750972_55755115
ES.13844.4	chr16	-	5592	3	ISM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	19250	1215	18628	-1215	3prime_fragment	FALSE	canonical	3	35	junction_1	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATCTCTCTTGGTAATT	NA	False	NA	NA	False	CATAAA	-32	NA	55735968	55721465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55726233_55731917_55731994_55735219
ES.13844.5	chr16	-	5568	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	-31	2374	-31	-2374	multi-exon	FALSE	canonical	3	23	junction_5	7.29383301152419	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCATACCCTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	55755249	55722624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.6	chr16	-	5565	11	NNC	ENSMUSG00000022604.19	novel	7911	11	NA	NA	-9	-2374	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	12.1753850041795	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCATACCCTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	55755227	55722624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748064_55748243_55750828_55750972_55755115
ES.13844.8	chr16	-	2860	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	-10	5061	-10	2	multi-exon	FALSE	canonical	3	23	junction_5	7.29383301152419	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACACCAATAATGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	55755228	55725311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ES.13844.9	chr16	-	5007	3	NIC	ENSMUSG00000022604.19	novel	7911	11	NA	NA	15664	6	intron_retention	FALSE	canonical	3	24	junction_2	5.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATATGCACTTTATTTCT	NA	False	NA	NA	False	ATTAAA	-2	NA	55738932	55725334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_55726233_55731917_55735995_55738900
ES.13845.1	chr16	-	178	1	Intergenic	novelGene_11615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	55770505	55770327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55770300_55770500
ES.13846.1	chr16	+	656	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	22	-1	22	1	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCTGATTGATTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	55786659	55791799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ES.13846.11	chr16	+	2158	4	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	118	1	-28	-1	intron_retention	FALSE	canonical	3	9815	junction_1	1814.47813127877	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786755	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872
ES.13846.12	chr16	+	3784	3	NIC	ENSMUSG00000098274.8	novel	677	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	9815	junction_1	1575.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786770	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55786802_55786909_55790539_55791673
ES.13846.13	chr16	+	542	6	NNC	ENSMUSG00000098274.8	novel	677	6	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5160.7291190296	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTAGGTGGTGCTGATT	NA	False	NA	NA	False	AATAAA	-12	NA	55786775	55791791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790464_55790539_55791673
ES.13846.14	chr16	+	2566	3	NIC	ENSMUSG00000098274.8	novel	677	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	9815	junction_1	1380	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786784	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55786802_55786909_55787534_55789872
ES.13846.15	chr16	+	622	5	FSM	ENSMUSG00000098274.8	ENSMUST00000137811.8	639	5	16	1	16	-1	multi-exon	FALSE	canonical	3	12575	junction_2	609.402371180159	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786799	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ES.13846.3	chr16	+	636	6	NNC	ENSMUSG00000098274.8	novel	677	6	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	5255.34282801798	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786691	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55786802_55786909_55786986_55787422_55787534_55789858_55790010_55790474_55790539_55791673
ES.13846.5	chr16	+	1693	5	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	118	1	-28	-1	intron_retention	FALSE	canonical	3	9815	junction_1	1658.96012233568	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGTGCTGATTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55786755	55791797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474
ES.13846.6	chr16	+	539	6	NNC	ENSMUSG00000098274.8	novel	677	6	NA	NA	-28	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5160.7291190296	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACTCTAGGTGGTGCTG	NA	False	NA	NA	False	AATAAA	-9	NA	55786755	55791788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790484_55790539_55791673
ES.13847.1	chr16	+	5037	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-90	-27	-90	27	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTATGCCTGATAGTT	NA	False	NA	33	True	NA	NA	NA	55794155	55829303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.10	chr16	+	4832	10	NIC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	38.9665890440566	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794188	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.11	chr16	+	4950	11	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	54.8492479437959	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794188	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55823071_55823190_55825737_55825856_55826272_55826432_55826537_55826714_55827170
ES.13847.12	chr16	+	5040	12	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.7744632161678	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGGCGTTGAGCTT	NA	False	NA	3	True	AATAAA	-24	NA	55794206	55829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810292_55810377_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.13	chr16	+	4339	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	-37	618	-37	-618	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGTTTGATTTTTTT	NA	False	NA	NA	False	ACTAAA	-10	NA	55794208	55828658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.14	chr16	+	3325	9	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-37	-4032	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	41.9387574327137	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	55794208	55825244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55824435
ES.13847.15	chr16	+	5056	12	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	51.3331365600321	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTTTGGCGTTGAGC	NA	False	NA	1	True	AATAAA	-22	NA	55794222	55829271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55825737_55825856_55826272_55826432_55826537_55826714_55827170
ES.13847.16	chr16	+	4519	11	Fusion	ENSMUSG00000098371.2_ENSMUSG00000022601.12	novel	3159	3	NA	NA	834	0	multi-exon	FALSE	canonical	0	0	junction_1	42.729380992474	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55795079	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_55795168_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.17	chr16	+	6270	10	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	6710	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	43.8755253916698	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55800955	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55824435_55826432_55826537_55826714_55827170
ES.13847.19	chr16	+	3961	8	ISM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	16375	3	1292	-3	3prime_fragment	FALSE	canonical	3	106	junction_1	17.3452340098698	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTGGCGTTGAGCTT	NA	False	NA	3	True	AATAAA	-24	NA	55810620	55829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.2	chr16	+	5096	12	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-75	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.3402199237419	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAAGCTTTGGCGTT	NA	False	NA	-3	True	AATAAA	-18	NA	55794170	55829267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55824435_55824546_55826272_55826432_55826537_55826714_55827170
ES.13847.20	chr16	+	3243	2	ISM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	25771	4032	-5538	-4032	internal_fragment	FALSE	canonical	3	151	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	1460	False	NA	NA	False	NA	NA	NA	55820016	55825244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55821087_55823071
ES.13847.21	chr16	+	5587	3	FSM	ENSMUSG00000022601.12	ENSMUST00000184618.2	3159	3	-2428	0	-2428	0	multi-exon	FALSE	canonical	3	149	junction_1	0.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	2727	False	NA	6	True	AATAAA	-27	NA	55823126	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55826432_55826537_55826714_55827170
ES.13847.3	chr16	+	3099	9	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-61	-4282	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	41.9387574327137	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTGTATTTGCTTGT	NA	False	NA	NA	False	GATAAA	-23	NA	55794184	55824994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55824435
ES.13847.4	chr16	+	5515	11	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	42.4099045035473	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794185	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55825737_55826432_55826537_55826714_55827170
ES.13847.5	chr16	+	4801	11	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-59	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.1674628802893	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAAGCTTTGGCGTT	NA	False	NA	-3	True	AATAAA	-18	NA	55794186	55829267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827339
ES.13847.6	chr16	+	4974	11	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.729380992474	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794188	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794727_55800952_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.7	chr16	+	4586	9	NIC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	43.7076580818511	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794188	55829276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ES.13847.9	chr16	+	4902	11	NNC	ENSMUSG00000022601.12	novel	4920	11	NA	NA	-57	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.7233345623561	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGGCGTTGAGCTTG	NA	False	NA	4	True	AATAAA	-25	NA	55794188	55829274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823074_55823190_55826272_55826432_55826537_55826644_55827170
ES.13848.1	chr16	-	2362	2	Genic_Genomic	ENSMUSG00000102101.2	novel	1350	1	NA	NA	963	19890	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTCAAATCACCAACAAGA	4938	False	NA	NA	False	AAAAAG	-24	NA	55794017	55773740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_55773751_55791665
ES.13848.2	chr16	-	133	1	Intergenic	novelGene_11616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCTACGTGTCTTTCC	1349	False	NA	NA	False	AATAAA	-12	NA	55786604	55786471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55786500_55786600
ES.13848.3	chr16	-	2369	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	960	-1979	960	1979	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATCACTTATTCAATG	4935	False	NA	NA	False	NA	NA	NA	55794020	55791651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55791700_55794000
ES.13848.4	chr16	-	1297	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	44	9	44	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAATCCCGTTTCCT	4019	False	NA	NA	False	ATTAAA	-15	NA	55794936	55793639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55793600_55794900
ES.13849.1	chr16	-	4986	2	Antisense	novelGene_ENSMUSG00000022601.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGGCATAGTAACATATA	9072	False	NA	NA	False	NA	NA	NA	55813468	55804046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55805015_55809450
ES.1385.1	chr1	+	176	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	739	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	8104	False	NA	NA	False	NA	NA	NA	134284709	134284885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134284700_134284900
ES.13850.1	chr16	-	2342	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	-46	-1	-46	1	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTCTTATTTTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55850148	55835867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.11	chr16	-	1977	7	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.78996738433	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850041	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55835994_55836373_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ES.13850.12	chr16	-	2413	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850097	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ES.13850.13	chr16	-	7535	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_3	1080.93810530483	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850032	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55840073_55840221_55842417_55842493_55844586
ES.13850.15	chr16	-	2226	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	862.592132760321	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850040	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844592_55844802_55849965
ES.13850.17	chr16	-	3411	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	-7	-2612	3	-2	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTCTTATTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55850066	55835870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.18	chr16	-	2226	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_4	1082.58553472693	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTCTTATTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55850037	55835870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849343_55849394_55849965
ES.13850.19	chr16	-	2226	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	828.986580108508	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTCTTATTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55850044	55835870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842423_55842490_55844586_55844802_55849965
ES.13850.2	chr16	-	2339	6	NIC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_4	1027.51727966006	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850042	55835868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55844896_55845001_55849965
ES.13850.20	chr16	-	9172	2	NNC	ENSMUSG00000071533.12	novel	792	4	NA	NA	-78	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	2702	False	NA	NA	False	AATAAA	-13	NA	55845109	55835871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837871_55837936
ES.13850.21	chr16	-	2236	5	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1015.82586475242	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850051	55835871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837674_55838829_55838891_55842417_55842490_55844586_55844802_55849965
ES.13850.22	chr16	-	2307	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	1070.34547693724	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850033	55835871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55844961_55849965
ES.13850.24	chr16	-	9155	4	NNC	ENSMUSG00000071533.12	novel	938	5	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	968.279229699092	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGGTCTTATTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	55850038	55835871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55846735_55847065
ES.13850.25	chr16	-	2042	4	FSM	ENSMUSG00000071533.12	ENSMUST00000137736.8	733	4	-19	-1290	1	-4	multi-exon	FALSE	canonical	0	0	junction_3	968.279229699092	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTGGTCTTATTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	55850068	55835872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55849965
ES.13850.26	chr16	-	2218	6	NNC	ENSMUSG00000071533.12	novel	2200	5	NA	NA	0	-158	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCATTTGTCCATT	NA	False	NA	NA	False	CATAAA	-19	NA	55850059	55836026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ES.13850.27	chr16	-	6621	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-8	-710	2	511	intron_retention	FALSE	canonical	3	1624	junction_1	383.115590332155	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAAAAAAGGAAAAA	NA	False	NA	4	True	TTTAAA	-7	NA	55850047	55836651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ES.13850.28	chr16	-	1411	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-29	-444	1	245	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGAATTGAGTATTA	NA	False	NA	-5	True	AATAAA	-22	NA	55850068	55836917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ES.13850.29	chr16	-	1213	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	33	1049	0	245	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGAATTGAGTATTA	NA	False	NA	-5	True	AATAAA	-22	NA	55850069	55836917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.30	chr16	-	1138	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	13	1049	3	245	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGAATTGAGTATTA	NA	False	NA	-5	True	AATAAA	-22	NA	55850046	55836917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ES.13850.31	chr16	-	5380	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	962	-439	962	240	3prime_fragment	FALSE	canonical	3	1624	junction_1	383.115590332155	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTATATGAAGAATTGAG	NA	False	NA	-10	True	AATAAA	-17	NA	55849077	55836922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ES.13850.32	chr16	-	1298	6	NNC	ENSMUSG00000071533.12	novel	938	5	NA	NA	0	236	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCTTATATGAAGAAT	NA	False	NA	-14	True	AATAAA	-13	NA	55850039	55836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ES.13850.33	chr16	-	910	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	-2	1387	-2	-93	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGCATATTTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	55850104	55837255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.34	chr16	-	797	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	16	1387	-4	-93	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGCATATTTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	55850043	55837255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ES.13850.35	chr16	-	950	6	NIC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-1	-93	combination_of_known_junctions	FALSE	canonical	2	22	junction_4	1027.51727966006	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGCATATTTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	55850040	55837255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55844896_55845001_55849965
ES.13850.36	chr16	-	8125	3	ISM	ENSMUSG00000071533.12	ENSMUST00000137736.8	733	4	-13	94	-3	-94	intron_retention	FALSE	canonical	3	1624	junction_1	342.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTGCATATTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	55850062	55837256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417
ES.13850.37	chr16	-	970	6	NNC	ENSMUSG00000071533.12	novel	938	5	NA	NA	-4	-96	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	1006.61305375998	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGAATTGCATATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	55850043	55837258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55844824_55845001_55849965
ES.13850.38	chr16	-	1048	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-7	-103	3	-96	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGAATTGCATATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	55850046	55837258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ES.13850.39	chr16	-	5932	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-30	1	0	-1	intron_retention	FALSE	canonical	3	1624	junction_1	383.115590332155	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGTTTTATATACAGA	NA	False	NA	NA	False	AATAAA	-23	NA	55850069	55837362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ES.13850.40	chr16	-	943	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-11	6	-1	-6	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATTTATGTTTTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	55850050	55837367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ES.13850.41	chr16	-	699	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	2	1499	2	-6	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATTTATGTTTTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	55850057	55837367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ES.13850.42	chr16	-	760	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	34	1501	1	-8	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAATTTATGTTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	55850068	55837369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.43	chr16	-	3552	3	ISM	ENSMUSG00000071533.12	ENSMUST00000096021.10	608	5	-571	-184	-571	-8	intron_retention	FALSE	canonical	3	1624	junction_1	342.5	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAATTTATGTTTTAT	2209	False	NA	NA	False	AATAAA	-16	NA	55845602	55837369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417
ES.13850.45	chr16	-	866	6	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	1092.24513732037	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAGAGGTAATTTATGT	NA	False	NA	NA	False	AATAAA	-11	NA	55850068	55837374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55846631_55846743_55849965
ES.13850.46	chr16	-	791	4	ISM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	16	1285	16	-164	5prime_fragment	FALSE	canonical	3	279	junction_3	1010.902676929	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACACACGTGCACATTT	NA	False	NA	NA	False	AATAAA	-28	NA	55850023	55838646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55838891_55842417_55842493_55844586_55845001_55849965
ES.13850.47	chr16	-	5769	3	ISM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	21	166	1	-166	intron_retention	FALSE	canonical	3	2309	junction_1	106.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTACACACGTGCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	55850038	55838648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55838891_55842417_55842493_55844586
ES.13850.48	chr16	-	608	4	FSM	ENSMUSG00000071533.12	ENSMUST00000122253.2	792	4	15	169	5	-169	multi-exon	FALSE	canonical	3	1778	junction_3	312.848206004126	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAGTACACACGTGCA	NA	False	NA	NA	False	AATAAA	-23	NA	55850044	55838651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.49	chr16	-	8802	2	Genic_Genomic	ENSMUSG00000071533.12	novel	901	5	NA	NA	1	-2686	multi-exon	TRUE	non_canonical	0	0	junction_1	0	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGAGTCAGGTCAAATA	NA	False	NA	NA	False	NA	NA	NA	55850068	55841168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_55842268_55842365
ES.13850.5	chr16	-	1485	6	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	886.293856460711	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850059	55835868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_55836787_55837553_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ES.13850.51	chr16	-	8883	1	NIC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	-4	-2698	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	737	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAATTAAGAG	NA	False	NA	NA	False	NA	NA	NA	55850063	55841180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_55841200_55850100
ES.13850.6	chr16	-	2261	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-61	0	-18	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850120	55835868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ES.13850.7	chr16	-	7425	4	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-9	0	1	0	intron_retention	FALSE	canonical	3	1624	junction_1	383.115590332155	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850068	55835868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586
ES.13850.8	chr16	-	3410	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	-980	-1492	-917	-1	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55851019	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ES.13850.9	chr16	-	9515	3	ISM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	-6	1	4	-1	intron_retention	FALSE	canonical	3	1624	junction_1	342.5	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	55850065	55835869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_55837681_55838834_55838891_55842417
ES.13851.1	chr16	-	2325	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	16	661	16	-661	multi-exon	FALSE	canonical	3	404	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTGGACCAGAATGAT	7402	False	NA	NA	False	AATAAA	-23	NA	55858166	55853632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55855655_55857863
ES.13851.2	chr16	-	2113	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	74	815	74	-815	multi-exon	FALSE	canonical	3	404	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGTTGTGTTCCAGG	7460	False	NA	NA	False	ATTAAA	-11	NA	55858108	55853786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55855655_55857863
ES.13851.3	chr16	-	1904	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	0	1098	0	-1098	multi-exon	FALSE	canonical	3	404	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAGACTTTATTGTCC	7386	False	NA	8	True	AATAAA	-34	NA	55858182	55854069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_55855655_55857863
ES.13852.1	chr16	+	176	1	Intergenic	novelGene_11617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCACTACGCACAA	NA	False	NA	NA	False	NA	NA	NA	55876046	55876222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55876000_55876200
ES.13853.1	chr16	-	165	1	Intergenic	novelGene_11618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5051	False	NA	NA	False	NA	NA	NA	55890331	55890166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55890200_55890300
ES.13854.1	chr16	+	2537	17	ISM	ENSMUSG00000052917.16	ENSMUST00000089362.9	4825	24	-55	14123	4	-12355	5prime_fragment	FALSE	canonical	1	2	junction_12	13.24277515289	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAACAGAAGATAATC	NA	False	NA	NA	False	TATAAA	-21	NA	55895775	55996252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159
ES.13854.10	chr16	+	4688	23	NNC	ENSMUSG00000052917.16	novel	4825	24	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	12.0773163512402	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAATTTTTTTCTTAAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	55895843	56010353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999953_56000888_56000942_56004509_56004554_56006421_56006573_56008597
ES.13854.11	chr16	+	805	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	11	98	11	-98	multi-exon	FALSE	canonical	3	14	junction_5	10.507140429251	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGATAACTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	55895853	55946685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ES.13854.12	chr16	+	177	1	Intergenic	novelGene_11619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	55897826	55898003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_55897800_55898000
ES.13854.13	chr16	+	5105	18	NIC	ENSMUSG00000052917.16	novel	4802	23	NA	NA	36272	-5	intron_retention	FALSE	canonical	0	0	junction_10	6.22974225641117	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAAGGACTGCTAGC	NA	False	NA	NA	False	ATTAAA	-37	NA	55932114	56010369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55993519_55993637_55996159_55996283_55999319_55999413_55999860_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ES.13854.14	chr16	+	121	1	NIC	ENSMUSG00000052917.16	novel	4802	23	NA	NA	48409	73	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCATGTGCCTGATCTT	NA	False	NA	NA	False	AATATA	-8	NA	55944251	55944372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55944300_55944400
ES.13854.2	chr16	+	2958	4	NIC	ENSMUSG00000052917.16	novel	914	6	NA	NA	-6	-96	intron_retention	FALSE	canonical	0	0	junction_2	16.5730705262081	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATAACTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	55895780	55946687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55895942_55902718_55902772_55931968_55932167_55944141
ES.13854.3	chr16	+	2195	6	NNC	ENSMUSG00000052917.16	novel	855	7	NA	NA	-6	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.7837748900611	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATATTTGAAAATTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	55895780	55944031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55942421
ES.13854.4	chr16	+	4790	23	FSM	ENSMUSG00000052917.16	ENSMUST00000089360.10	4802	23	9	3	-6	-3	multi-exon	FALSE	canonical	1	1	junction_21	11.3403397561592	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAGGACTGCTAGCAA	NA	False	NA	NA	False	ATTAAA	-39	NA	55895780	56010371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ES.13854.5	chr16	+	1055	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	-45	120	-5	-1	multi-exon	FALSE	canonical	3	14	junction_6	9.3407708461347	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGCCTTGCTAGC	NA	False	NA	NA	False	ACTAAA	-16	NA	55895781	55946782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ES.13854.6	chr16	+	4831	24	FSM	ENSMUSG00000052917.16	ENSMUST00000089362.9	4825	24	-3	-3	1	3	multi-exon	FALSE	canonical	1	1	junction_22	11.8366321271476	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGCTAGCAATGTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	55895827	56010378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ES.13854.7	chr16	+	3176	6	ISM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	4	120	0	-1	intron_retention	FALSE	canonical	3	22	junction_2	7.36478105580879	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGCCTTGCTAGC	NA	False	NA	NA	False	ACTAAA	-16	NA	55895830	55946782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141
ES.13854.8	chr16	+	4531	22	NIC	ENSMUSG00000052917.16	novel	4802	23	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	8.62075752573173	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAAGGACTGCTAGC	NA	False	NA	NA	False	ATTAAA	-37	NA	55895839	56010369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_55895942_55902718_55902772_55917702_55917795_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ES.13854.9	chr16	+	972	7	ISM	ENSMUSG00000052917.16	ENSMUST00000202000.2	3218	8	0	2656	0	198	5prime_fragment	FALSE	canonical	3	17	junction_6	8.60232526704263	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACCTAAGTATGTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	55895842	55959604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347
ES.13855.1	chr16	-	3947	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTTTGTAGCAGCTCC	4073	False	NA	NA	False	AATAAA	-34	NA	55936660	55930613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934491_55936590
ES.13855.10	chr16	-	2938	1	Intergenic	novelGene_11621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAAGTTACAACT	4072	False	NA	NA	False	NA	NA	NA	55936661	55933723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55933700_55936700
ES.13855.11	chr16	-	429	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGAGCTGGGAGGTGGTG	4059	False	NA	-4	True	NA	NA	NA	55936674	55933916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55936590
ES.13855.12	chr16	-	2699	1	Intergenic	novelGene_11622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGAGCTGGGAGGTGGTG	4118	False	NA	-4	True	NA	NA	NA	55936615	55933916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55933900_55936600
ES.13855.13	chr16	-	654	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCATCATTAGAGCTG	4053	False	NA	-14	True	NA	NA	NA	55936680	55933926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934491_55936590
ES.13855.2	chr16	-	3016	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAACTGTGGGGGATTCT	4118	False	NA	NA	False	AATAAA	-16	NA	55936615	55931499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934491_55936590
ES.13855.3	chr16	-	2780	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTATTTTACCTTTTTT	4072	False	NA	NA	False	ATTAAA	-17	NA	55936661	55931552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55936590
ES.13855.4	chr16	-	2008	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAGCATCATCTAAC	4050	False	NA	NA	False	AATAAA	-17	NA	55936683	55932346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55936590
ES.13855.5	chr16	-	4276	1	Intergenic	novelGene_11620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAGCATCATCTAAC	4111	False	NA	NA	False	AATAAA	-17	NA	55936622	55932346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_55932300_55936600
ES.13855.6	chr16	-	2214	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAGCATCATCTAAC	4073	False	NA	NA	False	AATAAA	-17	NA	55936660	55932346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934491_55936590
ES.13855.7	chr16	-	2108	3	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	9	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAAGCATCATCTAAC	4061	False	NA	NA	False	AATAAA	-17	NA	55936672	55932346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55934379_55934491_55936590
ES.13855.8	chr16	-	1896	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAAATATGCATATAAT	4061	False	NA	NA	False	AATAAA	-17	NA	55936672	55932447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55936590
ES.13855.9	chr16	-	1767	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTGCAGAAATAATGAT	4073	False	NA	NA	False	NA	NA	NA	55936660	55932564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_55934262_55936590
ES.13856.1	chr16	-	1796	9	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	21	16840	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	190.926319230744	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	56537653	56493854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56493866_56510694_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.10	chr16	-	1825	9	NIC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	241.91188349273	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTCTTGTTGCCTA	NA	False	NA	-2	True	AATAAA	-14	NA	56537654	56510696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.15	chr16	-	1870	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	201.454608246308	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTCTTGTTGCCTA	NA	False	NA	-2	True	AATAAA	-14	NA	56537754	56510696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533190_56537547
ES.13856.16	chr16	-	6330	1	NIC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	9030	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGTCTTGTTGCCT	NA	False	NA	-3	True	AATAAA	-13	NA	56517027	56510697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56510700_56517000
ES.13856.17	chr16	-	2068	9	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	253.635780943857	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGTCTTGTTGCCT	NA	False	NA	-3	True	AATAAA	-13	NA	56537643	56510697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56530608_56530917_56532973_56533204_56537547
ES.13856.18	chr16	-	8582	6	NIC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	474	junction_1	60.5441987311749	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGTCTTGTTGCCT	NA	False	NA	-3	True	AATAAA	-13	NA	56537735	56510697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56514853_56517821_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.19	chr16	-	1929	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.292791765162	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGTGGTCTTGTTGCC	NA	False	NA	-4	True	AATAAA	-12	NA	56537809	56510698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56511517_56514770_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.2	chr16	-	5015	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	181	-3251	42	3251	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATAGCTGCACTCCGAC	NA	False	NA	NA	False	AATAAA	-18	NA	56537632	56507443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.3	chr16	-	4796	7	NIC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-21	0	intron_retention	FALSE	canonical	3	532	junction_1	46.1606494273592	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537695	56510694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56511517_56514762_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.4	chr16	-	5177	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_3	258.479304820344	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537686	56510694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56514853_56517821_56517960_56521431_56521600_56523873_56523987_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.5	chr16	-	1966	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	-22	1	-22	-1	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTTGTTGCCTAA	NA	False	NA	-1	True	AATAAA	-15	NA	56537835	56510695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.6	chr16	-	1853	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	169.645368402465	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTCTTGTTGCCTA	NA	False	NA	-2	True	AATAAA	-14	NA	56537735	56510696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13856.9	chr16	-	1876	8	NNC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.108728372931	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGTCTTGTTGCCTA	NA	False	NA	-2	True	AATAAA	-14	NA	56537699	56510696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56511517_56514762_56514853_56517821_56518007_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ES.13857.1	chr16	-	1444	6	NNC	ENSMUSG00000022754.7	novel	2701	6	NA	NA	-814	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.41660919471891	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTCATTTTTTTTT	2113	False	NA	NA	False	AATAAA	-29	NA	56688892	56626631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56688687
ES.13858.1	chr16	+	161	1	Intergenic	novelGene_11623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTTAAGTTATTT	NA	False	NA	NA	False	NA	NA	NA	56941107	56941268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_56941100_56941300
ES.13859.1	chr16	+	6275	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-286	-25	-286	25	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTAGTGTTCTGGTA	NA	False	NA	38	True	AATAAA	-40	NA	56941779	56977093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.10	chr16	+	2581	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-10	3393	-10	-2573	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATATTCTCATTGATA	NA	False	NA	NA	False	AGTAAA	-11	NA	56942055	56973675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.11	chr16	+	6199	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-10	-225	-10	225	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGGACCTTGTGGC	NA	False	NA	NA	False	ATTAAA	-17	NA	56942055	56977293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.13	chr16	+	3784	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-10	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	431.513212882945	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942055	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972962
ES.13859.14	chr16	+	3679	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-10	-1352	combination_of_known_splicesites	FALSE	canonical	2	32	junction_10	442.030541931211	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTATCCATTTTTGAA	NA	False	NA	30	True	AATAAA	-14	NA	56942055	56974896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56972945
ES.13859.15	chr16	+	2351	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-9	-2852	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	551.014821337261	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTTTTTTTTTAAT	NA	False	NA	19	True	AATAAA	-16	NA	56942056	56973396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56954618_56954669_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.17	chr16	+	3312	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	1	-2853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	433.236922947431	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942066	56973395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56954636_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.18	chr16	+	2292	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	12	-2853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	433.236922947431	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942077	56973395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953618_56955006_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.19	chr16	+	5243	11	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	12	-1357	intron_retention	FALSE	canonical	0	0	junction_1	450.760790220267	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTTCTATCCATTT	NA	False	NA	25	True	AATAAA	-9	NA	56942077	56974891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942626_56953441_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.2	chr16	+	4107	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-282	2139	-282	-1319	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTGTTTTTTTAA	NA	False	NA	63	True	NA	NA	NA	56941783	56974929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.20	chr16	+	5361	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	12	-1357	intron_retention	FALSE	canonical	3	1304	junction_5	77.4907091205133	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTTCTATCCATTT	NA	False	NA	25	True	AATAAA	-9	NA	56942077	56974891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56968194_56970182_56970306_56972945
ES.13859.21	chr16	+	4174	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	12	-1355	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	432.961128558876	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCTATCCATTTTT	NA	False	NA	27	True	AATAAA	-11	NA	56942077	56974893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56954618_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.24	chr16	+	3742	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	18	-1353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	435.557380152097	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942083	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958531_56960961_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.25	chr16	+	1914	10	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	19	-2854	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	476.167752367862	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTTTTTTTTTA	NA	False	NA	17	True	AATAAA	-14	NA	56942084	56973394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.26	chr16	+	3840	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	19	-1353	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	431.887209793797	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942084	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942626_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.29	chr16	+	3785	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	19	-1353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	433.236922947431	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942084	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953618_56955006_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.3	chr16	+	3810	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-280	2434	-280	-1614	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTCTTCGCTTAAA	NA	False	NA	9	True	AATACA	-21	NA	56941785	56974634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.30	chr16	+	4911	11	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	19	3674	19	-2854	intron_retention	FALSE	canonical	3	1304	junction_5	126.389912572167	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTTTTTTTTTA	NA	False	NA	17	True	AATAAA	-14	NA	56942084	56973394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182
ES.13859.31	chr16	+	3922	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	20	-1345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	551.196948820373	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCATTTTTGAAACAGAAA	NA	False	NA	37	True	AATAAA	-21	NA	56942085	56974903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56954618_56954762_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.32	chr16	+	4106	11	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	20	-2629	intron_retention	FALSE	canonical	0	0	junction_1	429.279908684299	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCAGCATGCACAGTGC	NA	False	NA	NA	False	AGTAAA	-19	NA	56942085	56973619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942583_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56968194_56970182_56970306_56972945
ES.13859.33	chr16	+	8585	11	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	20	-1	20	1	intron_retention	FALSE	canonical	3	1304	junction_5	126.389912572167	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGATGGGATATTAGC	NA	False	NA	14	True	AATAAA	-16	NA	56942085	56977069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182
ES.13859.35	chr16	+	2370	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	20	-2853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	546.487794669032	1157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942085	56973395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56971038_56971138_56972945
ES.13859.36	chr16	+	3607	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	21	-1357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.074633608902	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTTCTATCCATTT	NA	False	NA	25	True	AATAAA	-9	NA	56942086	56974891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942106_56942264_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.38	chr16	+	3799	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	30	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	573.548343628799	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942095	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942626_56953439_56953614_56955015_56955143_56957060_56957171_56958422_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.39	chr16	+	2304	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	31	-2854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	435.609974158968	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTTTTTTTTTA	NA	False	NA	17	True	AATAAA	-14	NA	56942096	56973394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958347_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.4	chr16	+	4114	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-273	-1353	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	551.014821337261	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56941792	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56954618_56954669_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.40	chr16	+	5745	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	33	-1355	intron_retention	FALSE	canonical	3	1304	junction_5	127.961908394647	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCTATCCATTTTT	NA	False	NA	27	True	AATAAA	-11	NA	56942098	56974893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56970306_56972945
ES.13859.41	chr16	+	3781	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	33	-1355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	432.714686600767	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCTATCCATTTTT	NA	False	NA	27	True	AATAAA	-11	NA	56942098	56974893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942583_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.43	chr16	+	2128	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	39	-2854	combination_of_known_splicesites	FALSE	canonical	2	32	junction_10	442.030541931211	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTTTTTTTTTA	NA	False	NA	17	True	AATAAA	-14	NA	56942104	56973394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56972945
ES.13859.44	chr16	+	3654	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	39	-2853	intron_retention	FALSE	canonical	3	1304	junction_4	128.191107335883	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-15	NA	56942104	56973395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.45	chr16	+	3389	10	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	43	-1355	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	476.167752367862	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCTATCCATTTTT	NA	False	NA	27	True	AATAAA	-11	NA	56942108	56974893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.46	chr16	+	3761	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	43	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	433.236922947431	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942108	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953627_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.47	chr16	+	5435	1	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	43	-14487	mono-exon	FALSE	NA	NA	NA	NA	NA	1033	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTCTATATCTAATCAG	NA	False	NA	NA	False	NA	NA	NA	56942108	56947543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942100_56947500
ES.13859.48	chr16	+	5796	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	43	-2	intron_retention	FALSE	canonical	2	32	junction_10	442.030541931211	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTGATGGGATATT	NA	False	NA	11	True	AATAAA	-13	NA	56942108	56977066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56972945
ES.13859.5	chr16	+	2534	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-239	3669	-239	-2849	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTTTTTTTAATATT	NA	False	NA	22	True	AATAAA	-19	NA	56941826	56973399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.50	chr16	+	3651	12	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	53	-1435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	414.089881248101	1194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGAAAGCTGCATCTGT	NA	False	NA	-53	True	NA	NA	NA	56942118	56974813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966505_56968095_56968194_56970182_56970306_56972945
ES.13859.52	chr16	+	2363	13	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	373	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	416.809400552445	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGATGGGATATTAG	NA	False	NA	13	True	AATAAA	-15	NA	56942438	56977068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945_56973735_56976962
ES.13859.53	chr16	+	4754	11	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	9919	2173	-5876	-1353	3prime_fragment	FALSE	canonical	3	1304	junction_4	127.787362442458	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56951984	56974895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.54	chr16	+	5305	10	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	12941	2	-2854	-2	3prime_fragment	FALSE	canonical	3	1304	junction_3	134.34762353915	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTGATGGGATATT	NA	False	NA	11	True	AATAAA	-13	NA	56955006	56977066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.55	chr16	+	5166	9	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	14993	7	-802	-7	3prime_fragment	FALSE	canonical	3	1304	junction_2	142.492050216845	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTCATGTTGATGGG	NA	False	NA	6	True	AATAAA	-8	NA	56957058	56977061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.56	chr16	+	2996	9	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	14993	2177	-802	-1357	3prime_fragment	FALSE	canonical	3	1304	junction_2	142.492050216845	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTTCTATCCATTT	NA	False	NA	25	True	AATAAA	-9	NA	56957058	56974891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.57	chr16	+	3561	1	FSM	ENSMUSG00000022752.10	ENSMUST00000231298.2	4170	1	632	-23	632	23	mono-exon	FALSE	NA	NA	NA	NA	NA	1096	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTTTGAGCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	56958492	56962053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56958500_56962100
ES.13859.58	chr16	+	2536	6	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	21011	2175	5216	-1355	3prime_fragment	FALSE	canonical	3	1309	junction_2	152.611401933145	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCTATCCATTTTT	NA	False	NA	27	True	AATAAA	-11	NA	56963076	56974893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.59	chr16	+	4564	5	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	22986	7	7191	-7	3prime_fragment	FALSE	canonical	3	1309	junction_1	165.863648820349	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTCATGTTGATGGG	NA	False	NA	6	True	AATAAA	-8	NA	56965051	56977061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.60	chr16	+	1977	1	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-2053	-2702	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTTTAATTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	56971569	56973546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56971600_56973500
ES.13859.61	chr16	+	2742	1	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	-1450	-1334	mono-exon	FALSE	NA	NA	NA	NA	NA	1187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAGATAGGAAATT	NA	False	NA	48	True	AATAAA	-32	NA	56972172	56974914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_56972200_56974900
ES.13859.7	chr16	+	2124	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-41	3881	-41	-3061	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTTAGTAGTCCCTTT	NA	False	NA	NA	False	CATAAA	-12	NA	56942024	56973187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.13859.9	chr16	+	2449	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	-11	3526	-11	-2706	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATCCTTTTTAATTTT	NA	False	NA	NA	False	AATATA	-15	NA	56942054	56973542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ES.1386.1	chr1	+	3735	1	Antisense	novelGene_ENSMUSG00000042305.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAATATGCCAAAGAAATG	8415	False	NA	NA	False	NA	NA	NA	134285020	134288755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_134285000_134288800
ES.1386.2	chr1	+	2715	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	8415	False	NA	NA	False	NA	NA	NA	134285020	134287735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134285000_134287700
ES.1386.3	chr1	+	3033	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAACGTTAAGTCGGAA	8415	False	NA	NA	False	AATAAA	-6	NA	134285020	134288053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134285000_134288100
ES.13860.1	chr16	-	1559	7	NNC	ENSMUSG00000046748.9	novel	3073	7	NA	NA	-50887	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTTCTTTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	56942622	56858994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56859454_56861049_56861196_56865552_56865741_56867257_56867465_56869707_56869901_56891352_56891501_56942404
ES.13861.1	chr16	-	162	1	Intergenic	novelGene_11624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	56946089	56945927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_56945900_56946100
ES.13862.1	chr16	-	3458	1	Intergenic	novelGene_11625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGAAGGGTCGTGGTA	NA	False	NA	NA	False	NA	NA	NA	56950291	56946833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_56946800_56950300
ES.13863.1	chr16	-	3068	9	NIC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	4	-1	intron_retention	TRUE	canonical	3	677	junction_2	39.2364626336269	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGATGTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	56987700	56977029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56986580_56987643
ES.13863.10	chr16	-	1007	9	NIC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-12	-104	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	236.80236353339	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTGCTTGGTAACAA	NA	False	NA	-33	True	ATTAAA	-16	NA	56987716	56977271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56977530_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ES.13863.11	chr16	-	2836	9	NIC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-9	101	intron_retention	FALSE	canonical	3	677	junction_2	39.2364626336269	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATGTGCTTGGTAA	NA	False	NA	-36	True	ATTAAA	-13	NA	56987713	56977274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56986580_56987643
ES.13863.12	chr16	-	2826	7	NNC	ENSMUSG00000022751.10	novel	1181	7	NA	NA	-1486	100	intron_retention	FALSE	canonical	3	17	junction_2	264.69479279603	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAAATGTGCTTGGTA	NA	False	NA	-37	True	ATTAAA	-12	NA	56986056	56977275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56977530_56977846_56977896_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880
ES.13863.2	chr16	-	1315	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-32	3	-23	-2	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTGATGTTTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	56987727	56977030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ES.13863.3	chr16	-	1165	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-21	142	-12	-2	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGTTTCCATGTGTG	NA	False	NA	69	True	ATTAAA	-14	NA	56987716	56977169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ES.13863.5	chr16	-	5463	5	NIC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-17	-99	intron_retention	FALSE	canonical	3	677	junction_2	49.1172067609712	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGGTAACAATGTTC	NA	False	NA	-28	True	ATTAAA	-21	NA	56987721	56977266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56977530_56977846_56977903_56979780_56982148_56983880_56986580_56987643
ES.13863.6	chr16	-	1103	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-60	243	-51	-103	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGCTTGGTAACAAT	NA	False	NA	-32	True	ATTAAA	-17	NA	56987755	56977270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ES.13863.9	chr16	-	816	9	NNC	ENSMUSG00000022751.10	novel	1286	10	NA	NA	-16	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.432670479784	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGCTTGGTAACAAT	NA	False	NA	-32	True	ATTAAA	-17	NA	56987720	56977270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983908_56986529_56986580_56987643
ES.13864.1	chr16	-	3724	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	-25	-9	-25	9	multi-exon	TRUE	canonical	3	134	junction_12	18.4520326427881	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGATGTCTGTTCTCTT	NA	False	NA	5	True	AATAAA	-31	NA	57051892	56989215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.10	chr16	-	6366	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	42.6758928894292	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051763	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57021339_57027778_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.11	chr16	-	3206	16	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	44.8239023537914	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051754	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032782_57051672
ES.13864.14	chr16	-	3703	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.2252159039061	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	57051892	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038776_57051676
ES.13864.15	chr16	-	3626	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-101	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.2252159039061	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	57051968	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051837
ES.13864.16	chr16	-	3234	16	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	45.3776254214441	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	57051744	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57034526_57034633_57038671_57038784_57051676
ES.13864.17	chr16	-	3222	3	NNC	ENSMUSG00000022749.9	novel	490	3	NA	NA	3660	-4	intron_retention	FALSE	canonical	3	21	junction_2	90	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	56994959	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56992181_56993386_56993523_56994825
ES.13864.18	chr16	-	5134	2	NNC	ENSMUSG00000022749.9	novel	659	4	NA	NA	4221	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	56994398	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56993701_56993736
ES.13864.19	chr16	-	2017	4	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	3683	-4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	80.5536398239638	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	False	NA	-8	True	AATAAA	-18	NA	56994936	56989228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56994825
ES.13864.21	chr16	-	4233	3	ISM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	56017	5	2769	-5	3prime_fragment	FALSE	canonical	3	181	junction_1	10	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTCTGCCCTGGAGG	NA	False	NA	-9	True	AATAAA	-17	NA	56995850	56989229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_56990804_56991985_56992181_56993386
ES.13864.22	chr16	-	3150	4	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	3684	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	90.4077184512227	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTTCTGCCCTGGAG	NA	False	NA	-10	True	AATAAA	-16	NA	56994935	56989230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56993689
ES.13864.24	chr16	-	4779	17	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	134	junction_11	16.3686772144239	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTTCTGCCCTGGAG	NA	False	NA	-10	True	AATAAA	-16	NA	57051756	56989230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56990804_56991985_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.25	chr16	-	6622	4	ISM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	48855	6	-97	-6	3prime_fragment	FALSE	canonical	3	159	junction_3	17.1529071070248	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTTCTGCCCTGGAG	NA	False	NA	-10	True	AATAAA	-16	NA	57003012	56989230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294
ES.13864.26	chr16	-	3494	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	51.434979278946	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTTCTGCCCTGGAG	NA	False	NA	-10	True	AATAAA	-16	NA	57051748	56989230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028552_57028691_57032733_57032854_57034526_57034633_57038671_57038784_57051676
ES.13864.27	chr16	-	2639	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	19	1032	19	-547	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTGTTCTGTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	57051848	56990256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.28	chr16	-	2243	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	25	1422	25	-937	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACCTTTGATTTGC	NA	False	NA	NA	False	AATATA	-19	NA	57051842	56990646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.29	chr16	-	2716	16	ISM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	128	3234	-3	-307	5prime_fragment	FALSE	canonical	3	134	junction_10	16.0477066551233	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAGAATGGCAGAATAGT	NA	False	NA	NA	False	NA	NA	NA	57051739	56992458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.3	chr16	-	6447	17	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-20	0	intron_retention	TRUE	canonical	0	0	junction_12	43.6881258896511	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051756	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57021339_57027778_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.30	chr16	-	2450	15	NNC	ENSMUSG00000022749.9	novel	729	8	NA	NA	-19	-605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.4518198245503	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGAAGGGTTTCTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	57051755	57002269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_57003141_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.31	chr16	-	2856	1	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-13487	-3908	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAGTCTATTCATA	NA	False	NA	NA	False	NA	NA	NA	57035083	57032227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_57032200_57035100
ES.13864.32	chr16	-	4116	1	Intergenic	novelGene_11626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAAACCATCA	NA	False	NA	NA	False	NA	NA	NA	57048321	57044205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_57044200_57048300
ES.13864.4	chr16	-	3786	10	ISM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	37663	0	7331	0	3prime_fragment	FALSE	canonical	3	144	junction_4	18.6276046318626	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57014204	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971
ES.13864.5	chr16	-	3623	19	FSM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	-26	-485	-19	0	multi-exon	FALSE	canonical	0	0	junction_4	54.4039815627178	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051755	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57001854_57001900_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.6	chr16	-	3084	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1866014578154	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051833	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990232_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ES.13864.7	chr16	-	3674	18	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	53.7385056511565	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051842	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028552_57028691_57032733_57032934_57034526_57034633_57038671_57038784_57051676
ES.13864.9	chr16	-	3628	18	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	37.195732165794	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051890	56989224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032854_57034526_57034633_57038671_57038784_57051676
ES.13865.1	chr16	+	178	1	Intergenic	novelGene_11627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57052513	57052691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_57052500_57052700
ES.13865.2	chr16	+	179	2	Intergenic	novelGene_11628	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAAGAACATC	NA	False	NA	NA	False	NA	NA	NA	57052513	57060527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_57052571_57060405
ES.13865.3	chr16	+	176	2	Intergenic	novelGene_11629	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATTTTCTGATAATCAA	NA	False	NA	NA	False	AATAAA	-10	NA	57052516	57058535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_57052677_57058519
ES.13865.4	chr16	+	168	1	Intergenic	novelGene_11630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	57060341	57060509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_57060300_57060500
ES.13866.1	chr16	+	173	1	Intergenic	novelGene_11631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	57074279	57074452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_57074300_57074500
ES.13867.1	chr16	+	1975	3	NNC	ENSMUSG00000097896.2	novel	349	2	NA	NA	-18	45407	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTCTGAATCTGAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57101234	57147266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_57101309_57101538_57101642_57145468
ES.13867.2	chr16	+	1519	3	NNC	ENSMUSG00000097896.2	novel	349	2	NA	NA	-18	68175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAGTTTAACATTG	NA	False	NA	NA	False	AATAAA	-6	NA	57101234	57170034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_57101281_57101538_57101642_57168664
ES.13868.1	chr16	-	176	1	ISM	ENSMUSG00000022753.16	ENSMUST00000023434.15	2973	7	1159	25107	1159	-22208	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	57112055	57111879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_57111900_57112100
ES.13869.1	chr16	-	6406	5	NIC	ENSMUSG00000022748.9	novel	1150	10	NA	NA	292146	-14	intron_retention	FALSE	canonical	3	200	junction_4	20.8251650653722	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTGTTGAGCAGACAG	NA	False	NA	-23	True	AATAAA	-18	NA	57134993	57122376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57131719_57133020
ES.1387.1	chr1	-	8657	5	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	715	intron_retention	FALSE	canonical	0	0	junction_1	274.667526293153	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCCAAAACAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	134289679	134273119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134277977_134280092_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.10	chr1	-	3274	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	0	-1585	0	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289679	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.11	chr1	-	4067	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289754	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.12	chr1	-	4813	8	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_2	268.407320682425	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289695	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.14	chr1	-	1379	9	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	258.248305899574	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289687	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134274032_134275771_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.15	chr1	-	3846	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_2	231.68009553405	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289696	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.16	chr1	-	5717	6	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	245.672139242528	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289679	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.18	chr1	-	2953	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	292.820005388217	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289678	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134288494_134288663_134289271_134289362_134289499
ES.1387.19	chr1	-	3857	7	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	295.912524611957	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289686	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280195_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.2	chr1	-	8117	6	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	5	715	intron_retention	FALSE	canonical	0	0	junction_1	299.323904825525	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCCAAAACAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	134289686	134273119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134277969_134280092_134280174_134280712_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.20	chr1	-	4012	8	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289707	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277969_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.22	chr1	-	3087	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	258.4491423543	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289679	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288639_134289271_134289362_134289499
ES.1387.24	chr1	-	5383	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_3	281.255711960138	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289678	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134280174_134280712_134280873_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
ES.1387.27	chr1	-	4805	1	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-596	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134278639	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134273800_134278600
ES.1387.3	chr1	-	5119	1	Genic_Genomic	ENSMUSG00000042305.13	novel	NA	NA	NA	NA	-219	691	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134278262	134273143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_134273100_134278300
ES.1387.31	chr1	-	5328	6	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	73	-1	intron_retention	FALSE	canonical	0	0	junction_2	291.123341558179	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCAACTTGTGAG	NA	False	NA	-10	True	AATAAA	-15	NA	134289355	134273835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134283455_134288494_134288663_134289271
ES.1387.32	chr1	-	4995	7	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_1	224.979258303219	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCAACTTGTGAG	NA	False	NA	-10	True	AATAAA	-15	NA	134289684	134273835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134277969_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.33	chr1	-	5160	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	287.813857078721	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCAACTTGTGAG	NA	False	NA	-10	True	AATAAA	-15	NA	134289678	134273835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.35	chr1	-	5878	7	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	302.300852720523	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGCTCAACTTGTGA	NA	False	NA	-11	True	AATAAA	-14	NA	134289679	134273836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.38	chr1	-	3053	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	0	-1364	0	-221	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGGTACTTAATTAAC	NA	False	NA	NA	False	AATAAA	-13	NA	134289679	134274055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.39	chr1	-	2251	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	38	860	0	725	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGTCCTTTGA	NA	False	NA	NA	False	AATAGA	-20	NA	134289679	134274694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.4	chr1	-	3213	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	-53	-11	-53	11	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAGTTTTTATGTCAA	NA	False	NA	2	True	AATAAA	-27	NA	134289770	134273823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.41	chr1	-	2721	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	314	intron_retention	FALSE	canonical	0	0	junction_2	298.896064114028	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTATAGATTGTGT	NA	False	NA	82	True	NA	NA	NA	134289679	134275105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.42	chr1	-	3551	8	NIC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	13	314	intron_retention	FALSE	canonical	0	0	junction_2	268.407320682425	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTATAGATTGTGT	NA	False	NA	82	True	NA	NA	NA	134289704	134275105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.43	chr1	-	1782	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	24	1343	-2	242	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTTTTTGTTTTAT	NA	False	NA	10	True	NA	NA	NA	134289693	134275177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.44	chr1	-	1860	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	-10	-161	2	161	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGATTTGTGCATCT	NA	False	NA	0	True	AATAAA	-28	NA	134289689	134275258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.46	chr1	-	2563	8	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	1	160	intron_retention	FALSE	canonical	0	0	junction_2	299.781348890916	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTGATTTGTGCATC	NA	False	NA	-1	True	AATAAA	-27	NA	134289678	134275259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134283452_134288494_134288663_134289271_134289362_134289499
ES.1387.47	chr1	-	1661	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	258.4491423543	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTGATTTGTGCATC	NA	False	NA	-1	True	AATAAA	-27	NA	134289678	134275259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288639_134289271_134289362_134289499
ES.1387.48	chr1	-	2402	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	159	intron_retention	FALSE	canonical	0	0	junction_2	231.68009553405	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGATTGATTTGTGCAT	NA	False	NA	-2	True	AATAAA	-26	NA	134289678	134275260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.49	chr1	-	5620	4	ISM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	4255	-158	4004	158	intron_retention	FALSE	canonical	0	0	junction_2	284.165835775911	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGATTGATTTGTGCA	NA	False	NA	-3	True	AATAAA	-25	NA	134285424	134275261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712
ES.1387.50	chr1	-	1575	7	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-4	154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	219.093397131604	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATAAGATTGATTTG	NA	False	NA	-7	True	AATAAA	-21	NA	134289432	134275265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280088_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271
ES.1387.54	chr1	-	1528	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-4	154	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	274.589643326587	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATAAGATTGATTTG	NA	False	NA	-7	True	AATAAA	-21	NA	134289695	134275265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134289271_134289362_134289499
ES.1387.55	chr1	-	1492	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	4	1653	4	-68	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTGTTCTTCGTTCAT	NA	False	NA	-1	True	NA	NA	NA	134289713	134275487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.58	chr1	-	1601	9	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	10	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	287.691648080023	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCTGGCCTCATTTTC	NA	False	NA	-14	True	TATAAA	-33	NA	134289707	134275532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280873_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.59	chr1	-	2153	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-10	-113	intron_retention	FALSE	canonical	0	0	junction_2	231.68009553405	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCTGGCCTCATTTTC	NA	False	NA	-14	True	TATAAA	-33	NA	134289701	134275532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.60	chr1	-	1384	8	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	258.4491423543	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAAACCTGGCCTCA	NA	False	NA	-19	True	TATAAA	-28	NA	134289679	134275537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288639_134289271_134289362_134289499
ES.1387.62	chr1	-	914	4	FSM	ENSMUSG00000042305.13	ENSMUST00000188205.2	725	4	13	-202	1	202	multi-exon	FALSE	canonical	3	517	junction_1	71.4749373323731	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTACAGAGGTCTAGTGGA	NA	False	NA	NA	False	AATAAA	-20	NA	134289678	134282977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.63	chr1	-	4478	3	ISM	ENSMUSG00000042305.13	ENSMUST00000188205.2	725	4	-2	1289	-2	-1023	5prime_fragment	FALSE	canonical	3	665	junction_2	3.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACACAAAGTAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	134289693	134284468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_134288663_134289271_134289362_134289499
ES.1387.64	chr1	-	4622	2	ISM	ENSMUSG00000042305.13	ENSMUST00000185903.2	334	3	-271	1023	-8	-1023	5prime_fragment	FALSE	canonical	3	672	junction_1	0	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACACAAAGTAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	134289699	134284468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_134288663_134289271
ES.1387.65	chr1	-	5233	1	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-10	-1023	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACACAAAGTAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	134289701	134284468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134284500_134289700
ES.1387.66	chr1	-	5068	2	NIC	ENSMUSG00000042305.13	novel	725	4	NA	NA	5	-1023	intron_retention	FALSE	canonical	3	665	junction_1	0	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACACAAAGTAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	134289674	134284468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134289362_134289499
ES.1387.67	chr1	-	3306	3	ISM	ENSMUSG00000042305.13	ENSMUST00000188205.2	725	4	13	2446	1	-2180	5prime_fragment	FALSE	canonical	3	665	junction_2	3.5	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTTGAGGTTTATTTA	NA	False	NA	NA	False	AATATA	-24	NA	134289678	134285625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_134288663_134289271_134289362_134289499
ES.1387.7	chr1	-	3129	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	274.604650881434	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTCAACTTGTGAGTT	NA	False	NA	-8	True	AATAAA	-17	NA	134289678	134273833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282598_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.8	chr1	-	5227	7	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	466	junction_2	80.3609910895136	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTCAACTTGTGAGTT	NA	False	NA	-8	True	AATAAA	-17	NA	134289678	134273833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_134275933_134277820_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ES.1387.9	chr1	-	3348	10	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	295.168292652945	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289693	134273834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280431_134280495_134280712_134280876_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
ES.13870.1	chr16	-	294	1	Intergenic	novelGene_11632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1005	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACGTACGCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	57211955	57211661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_57211700_57212000
ES.13871.1	chr16	+	3275	2	FSM	ENSMUSG00000043336.15	ENSMUST00000159414.2	3253	2	-30	8	-30	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGCTTGCTGAATTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	57369574	57393159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_57369703_57390012
ES.13872.1	chr16	+	9466	3	Antisense	novelGene_ENSMUSG00000022748.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATGGGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	57411390	57422441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_57412598_57413443_57416907_57417645
ES.13873.1	chr16	-	7210	2	FSM	ENSMUSG00000022748.9	ENSMUST00000231282.2	610	2	-25	-6575	-25	6575	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGAGCCAGGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	57427164	57258280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_57265355_57427028
ES.13873.2	chr16	-	1811	2	FSM	ENSMUSG00000022748.9	ENSMUST00000231282.2	610	2	-77	-1124	-7	1124	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATAGTACTATGTGTT	NA	False	NA	NA	False	NA	NA	NA	57427216	57263731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_57265355_57427028
ES.13873.3	chr16	-	535	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	-8	2	-8	-2	multi-exon	FALSE	canonical	3	94	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTATTTATGTTTTGTG	NA	False	NA	-3	True	AATAAA	-15	NA	57427235	57381797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_57382126_57427028
ES.13874.1	chr16	+	6573	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	6	-18	6	18	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTACTTGCATTGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	58228811	58290108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.12	chr16	+	4868	17	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	45	1302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	50.0098427811966	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCTGACCAAACCCCT	NA	False	NA	NA	False	AGTAAA	-13	NA	58228850	58288452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58282862_58282930_58283421_58283472_58284552_58284691_58285685
ES.13874.13	chr16	+	5698	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	45	-662	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	35.6940082117745	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCAGATTTTTTTGGAT	NA	False	NA	13	True	AATAAA	-16	NA	58228850	58289428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284669_58285819
ES.13874.14	chr16	+	3560	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	45	2956	45	-16	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAACCATTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	58228850	58287134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.15	chr16	+	6484	15	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	46	-675	intron_retention	FALSE	canonical	3	36	junction_8	27.804070323077	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGTCTTGCTCA	NA	False	NA	0	True	AATAAA	-3	NA	58228851	58289415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.16	chr16	+	4772	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	47	1742	47	1198	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTCTGGTTT	NA	False	NA	NA	False	GATAAA	-20	NA	58228852	58288348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.17	chr16	+	6308	19	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	47	-622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.4780688181303	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGTCCAGAAAATGCCA	NA	False	NA	8	True	AATAAA	-13	NA	58228852	58289468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58235183_58235240_58237283_58237374_58240079_58240350_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.18	chr16	+	5901	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	47	-607	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	30.3420500296206	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAATTTCTCAAAGTTG	NA	False	NA	23	True	AATAAA	-28	NA	58228852	58289483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.19	chr16	+	3857	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	47	3843	intron_retention	FALSE	canonical	0	0	junction_15	35.6940082117745	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTGGGAATGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	58228852	58293933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58292185
ES.13874.2	chr16	+	5652	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	8	-824	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTGGAAGTGGCTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	58228813	58289266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.20	chr16	+	5503	18	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	55	-617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.3791409789361	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAAAATGCCAAATTT	NA	False	NA	13	True	AATAAA	-18	NA	58228860	58289473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685_58286460_58286536_58288287_58288595
ES.13874.21	chr16	+	1952	12	ISM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	56	13185	56	-4	5prime_fragment	FALSE	canonical	3	119	junction_1	11.6696965762533	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTGTGGGAAGCTCA	NA	False	NA	NA	False	AATAAA	-29	NA	58228861	58276905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645
ES.13874.22	chr16	+	4566	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	58	1314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9960491659231	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTTGGTTATTTTGT	NA	False	NA	NA	False	AGTAAA	-25	NA	58228863	58288464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229004_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.23	chr16	+	5811	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	58	-620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.0133308651116	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTCCAGAAAATGCCAAA	NA	False	NA	10	True	AATAAA	-15	NA	58228863	58289470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276538_58276734_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.24	chr16	+	4791	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	58	1305	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACCAAACCCCTTGG	NA	False	NA	NA	False	AGTAAA	-16	NA	58228863	58288455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.25	chr16	+	4005	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	59	2497	59	443	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATCGGATGAAAACACAAA	NA	False	NA	NA	False	ATTAAA	-29	NA	58228864	58287593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.26	chr16	+	5807	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	59	-619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.0133308651116	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58228864	58289471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276528_58276728_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.27	chr16	+	4870	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	59	1314	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	30.3420500296206	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTTGGTTATTTTGT	NA	False	NA	NA	False	AGTAAA	-25	NA	58228864	58288464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.29	chr16	+	6020	18	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	67	-620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.800925335291	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTCCAGAAAATGCCAAA	NA	False	NA	10	True	AATAAA	-15	NA	58228872	58289470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58235183_58235240_58237283_58237374_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.3	chr16	+	5930	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	17	-611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.0355380145767	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCCAAATTTCTCAAA	NA	False	NA	19	True	AATAAA	-24	NA	58228822	58289479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281416_58283428_58283472_58284552_58284691_58285685
ES.13874.31	chr16	+	2834	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	67	3660	67	240	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTGAAAATCACTGAG	NA	False	NA	NA	False	AATACA	-30	NA	58228872	58286430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.32	chr16	+	5649	15	NIC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	67	-617	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	34.017702474339	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAAAATGCCAAATTT	NA	False	NA	13	True	AATAAA	-18	NA	58228872	58289473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58229315_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.33	chr16	+	5742	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	67	-617	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	40.4178178530212	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGAAAATGCCAAATTT	NA	False	NA	13	True	AATAAA	-18	NA	58228872	58289473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272081_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.34	chr16	+	2947	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	68	3546	68	354	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTGAAATTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	58228873	58286544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.35	chr16	+	5698	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	-614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	49.9759942372335	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAATGCCAAATTTCTC	NA	False	NA	16	True	AATAAA	-21	NA	58228873	58289476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272081_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281366_58283421_58283472_58284552_58284691_58285685
ES.13874.36	chr16	+	6501	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.5089753745117	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTACTTGCATTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	58228873	58290106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269311_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.39	chr16	+	5740	15	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	-656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.3109084736669	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTTTTGGATTAAATA	NA	False	NA	19	True	AATAAA	-22	NA	58228873	58289434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253821_58265721_58265756_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.4	chr16	+	5926	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	28	607	28	-607	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAATTTCTCAAAGTTG	NA	False	NA	23	True	AATAAA	-28	NA	58228833	58289483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.42	chr16	+	5604	15	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	-655	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	43.5409729626086	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTTTGGATTAAATAA	NA	False	NA	20	True	AATAAA	-23	NA	58228873	58289435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.43	chr16	+	5286	17	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	-826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8449335138399	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAGTGGAAGTGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	58228873	58289264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58228981_58229284_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.45	chr16	+	3244	19	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	69	236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.4780688181303	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAGAAACTGAAAATCAC	NA	False	NA	NA	False	AATACA	-26	NA	58228874	58286426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58235183_58235240_58237283_58237374_58240079_58240350_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.46	chr16	+	6433	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	69	18	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTACTTGCATTGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	58228874	58290108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.48	chr16	+	6273	15	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	70	16	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	43.5409729626086	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTACTTGCATTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	58228875	58290106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.5	chr16	+	5710	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	29	822	29	-822	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGAAGTGGCTGAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	58228834	58289268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.50	chr16	+	5853	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	70	-619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.5667760073296	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58228875	58289471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275507_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.51	chr16	+	6374	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	70	18	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	40.4178178530212	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTACTTGCATTGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	58228875	58290108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272081_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.52	chr16	+	5679	14	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	75	-618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	37.7285540006803	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAGAAAATGCCAAATT	NA	False	NA	12	True	AATAAA	-17	NA	58228880	58289472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58276602_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.53	chr16	+	5763	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	76	-664	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	34.1831667475219	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCAGATTTTTTTGG	NA	False	NA	11	True	AATAAA	-14	NA	58228881	58289426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272081_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.54	chr16	+	5921	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	78	-658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.8351782470801	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTTTTTGGATTAAA	NA	False	NA	17	True	AATAAA	-20	NA	58228883	58289432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271399_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.55	chr16	+	5638	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	222	-618	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	37.7844177171254	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAGAAAATGCCAAATT	NA	False	NA	12	True	AATAAA	-17	NA	58229027	58289472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.56	chr16	+	6503	17	NNC	ENSMUSG00000035107.14	novel	627	7	NA	NA	9174	14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	46.6125988869962	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTTACTTGCATTG	NA	False	NA	NA	False	AATAAA	-17	NA	58237979	58290104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58238043_58239975_58240350_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.57	chr16	+	5030	13	ISM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	36896	658	-9852	-658	3prime_fragment	FALSE	canonical	3	119	junction_9	11.4806600661964	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTTTTTGGATTAAA	NA	False	NA	17	True	AATAAA	-20	NA	58265701	58289432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.58	chr16	+	7723	10	NIC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	-8310	-622	intron_retention	FALSE	canonical	3	119	junction_6	11.13552872566	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGTCCAGAAAATGCCA	NA	False	NA	8	True	AATAAA	-13	NA	58267243	58289468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.59	chr16	+	5013	12	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	-6743	-619	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	34.8510407494857	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58268810	58289471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276515_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.6	chr16	+	2231	14	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	30	-2138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	38.2370370964744	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATGTGGCTGCTCCTT	NA	False	NA	NA	False	AATAAA	-10	NA	58228835	58282048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58281755
ES.13874.60	chr16	+	4844	10	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	-5428	-623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.6542271235322	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAGTCCAGAAAATGCC	NA	False	NA	7	True	AATAAA	-12	NA	58270125	58289467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281416_58283421_58283472_58284552_58284691_58285685
ES.13874.61	chr16	+	3250	1	NIC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	-3574	-1680	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAGGTTAGCTATCACT	NA	False	NA	NA	False	NA	NA	NA	58271979	58275229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58272000_58275200
ES.13874.62	chr16	+	3537	8	ISM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	43215	1636	-3533	1304	3prime_fragment	FALSE	canonical	3	119	junction_4	12.2591074016714	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACCAAACCCCTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	58272020	58288454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.63	chr16	+	3925	2	ISM	ENSMUSG00000035107.14	ENSMUST00000135415.2	2359	5	3943	-2320	3943	-620	3prime_fragment	FALSE	canonical	3	148	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTCCAGAAAATGCCAAA	NA	False	NA	10	True	AATAAA	-15	NA	58284550	58289470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58284691_58285685
ES.13874.7	chr16	+	4908	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	30	1623	30	1317	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGGTTATTTTGTTTT	NA	False	NA	NA	False	AGTAAA	-28	NA	58228835	58288467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.8	chr16	+	5568	15	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	30	-658	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	40.9589764899227	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTTTTTGGATTAAA	NA	False	NA	17	True	AATAAA	-20	NA	58228835	58289432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13874.9	chr16	+	5836	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	32	-616	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGAAAATGCCAAATTTC	NA	False	NA	14	True	AATAAA	-19	NA	58228837	58289474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ES.13875.1	chr16	-	2166	11	FSM	ENSMUSG00000022747.18	ENSMUST00000137035.8	4123	11	330	1627	248	1	multi-exon	FALSE	canonical	1	1	junction_6	1.74355957741627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTAAGAGTTGAGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	58343459	58290114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_58291091_58292673_58292827_58293771_58293910_58294016_58294204_58296212_58296309_58305125_58305190_58306757_58306862_58309266_58309345_58314042_58314225_58327810_58327978_58343438
ES.13875.2	chr16	-	1521	11	ISM	ENSMUSG00000022747.18	ENSMUST00000114357.10	1918	12	513	335	52	-335	3prime_fragment	FALSE	canonical	1	1	junction_6	1.78885438199983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATTATGTGTATTAAG	NA	False	NA	NA	False	AATATA	-13	NA	58344035	58290909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_58291091_58292673_58292827_58293771_58293910_58294016_58294204_58296212_58296309_58305125_58305190_58306757_58306862_58309266_58309345_58314042_58314225_58327810_58327978_58343864
ES.13875.3	chr16	-	826	3	NIC	ENSMUSG00000022747.18	novel	810	3	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAGCATAGTCGTT	NA	False	NA	NA	False	NA	NA	NA	58343720	58323232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_58323610_58327810_58327978_58343438
ES.13876.1	chr16	-	524	2	NNC	ENSMUSG00000055789.8	novel	1108	4	NA	NA	2829	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGCTTAAGAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	58456273	58455624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_58455906_58456030
ES.13877.1	chr16	+	3112	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	-10	-5	-10	5	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTCCTTTATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	58490644	58500754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
ES.13877.10	chr16	+	3647	6	ISM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	68	2	32	-2	intron_retention	FALSE	canonical	3	129	junction_2	29.0172362570938	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGTATTTGTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	58490722	58500747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307
ES.13877.12	chr16	+	2433	6	ISM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	314	970	278	471	intron_retention	FALSE	canonical	3	129	junction_2	29.0172362570938	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATTTGAAGAAACATGTT	NA	False	NA	NA	False	NA	NA	NA	58490968	58499779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307
ES.13877.3	chr16	+	3795	6	NIC	ENSMUSG00000022742.7	novel	3097	7	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	129	junction_2	27.9184526791869	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAAAGTATTTGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	58490672	58500745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58495824_58498307_58498413_58499032
ES.13877.4	chr16	+	3078	7	NNC	ENSMUSG00000022742.7	novel	3097	7	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.773581814208	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGTATTTGTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	58490678	58500747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494892_58495604_58495824_58498307_58498413_58499032
ES.13877.6	chr16	+	4699	5	NIC	ENSMUSG00000022742.7	novel	3097	7	NA	NA	13	-2	intron_retention	FALSE	canonical	3	129	junction_2	29.4310635213884	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGTATTTGTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	58490703	58500747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58491314_58492890_58493035_58493698_58495824_58498307_58498413_58499032
ES.13877.7	chr16	+	1563	5	FSM	ENSMUSG00000022742.7	ENSMUST00000232176.2	2994	5	16	1415	16	-1415	multi-exon	FALSE	canonical	3	129	junction_2	21.7873242964803	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAATTAACTTA	NA	False	NA	NA	False	NA	NA	NA	58490706	58496163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604
ES.13877.9	chr16	+	2045	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	66	986	30	455	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAGAAAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	58490720	58499763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
ES.13878.1	chr16	+	2118	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	16	13	1	-13	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTCTAAATTGTTTG	NA	False	NA	11	True	AATAAA	-18	NA	58548288	58554601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.10	chr16	+	3158	4	NIC	ENSMUSG00000022744.13	novel	2147	5	NA	NA	3	-41	intron_retention	FALSE	canonical	3	351	junction_1	37.6651917115348	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548388	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58548448_58549800_58550111_58551664_58553082_58553201
ES.13878.11	chr16	+	4886	3	NIC	ENSMUSG00000022744.13	novel	2147	5	NA	NA	-2	-41	intron_retention	FALSE	canonical	3	371	junction_2	1.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548399	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58551776_58552943_58553082_58553201
ES.13878.12	chr16	+	3290	3	ISM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	127	18	-2	-18	intron_retention	FALSE	canonical	3	351	junction_1	44	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTAGAGTGTCTAAATT	NA	False	NA	6	True	AATAAA	-13	NA	58548399	58554596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58548448_58549800_58550111_58551664
ES.13878.14	chr16	+	3068	5	ISM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	162	-602	39	-41	3prime_fragment	FALSE	canonical	3	34	junction_1	158.518926314809	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548449	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.4	chr16	+	2119	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	16	-41	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	183.063486255452	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548303	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58548448_58549542_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.5	chr16	+	2107	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	35	-602	35	-41	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548322	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.6	chr16	+	3408	4	NIC	ENSMUSG00000022744.13	novel	2147	5	NA	NA	36	-41	intron_retention	FALSE	canonical	3	371	junction_3	31.3723161756065	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548323	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.7	chr16	+	1909	5	NNC	ENSMUSG00000022744.13	novel	2147	5	NA	NA	-16	-41	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	168.339500712103	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548369	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58548448_58549900_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.8	chr16	+	2075	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	-16	-41	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	186.656261614766	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548369	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_58548448_58549520_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ES.13878.9	chr16	+	1907	6	NNC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	-10	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	156.329139957975	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	-17	True	AAAAAG	-45	NA	58548375	58554573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201_58553538_58553633
ES.13879.1	chr16	-	171	1	Intergenic	novelGene_11633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAATGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	58556411	58556240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_58556200_58556400
ES.1388.1	chr1	-	280	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCTCAAATATTTAAGC	9778	False	NA	NA	False	NA	NA	NA	134295057	134294777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134294800_134295100
ES.1388.2	chr1	-	178	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTGGTGTT	9778	False	NA	NA	False	NA	NA	NA	134295057	134294879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134294900_134295100
ES.13880.1	chr16	+	2090	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	-18	87	-18	83	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTACCCAGCATCTGTG	NA	False	NA	NA	False	AATAAA	-31	NA	59292119	59312737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.10	chr16	+	3713	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	13	-8	intron_retention	FALSE	canonical	3	227	junction_8	30.1744925392292	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTACAATGAAAATATACA	NA	False	NA	NA	False	AATAAA	-14	NA	59292150	59312646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59309797_59311567_59311658_59312103
ES.13880.11	chr16	+	7524	4	NIC	ENSMUSG00000022724.16	novel	2244	10	NA	NA	13	-3721	intron_retention	FALSE	canonical	3	233	junction_2	37.0435179514881	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59292150	59306460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59296333_59299532_59299653_59300653_59300783_59303367
ES.13880.12	chr16	+	3588	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	13	-1442	13	1442	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGGTACTGCTTTTG	NA	False	NA	NA	False	GATAAA	-14	NA	59292150	59314266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.14	chr16	+	1970	10	NNC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.7841049059493	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATACATATCTTTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	59292151	59312656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311574_59311658_59312103
ES.13880.15	chr16	+	3593	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	-5	-117	intron_retention	FALSE	canonical	3	227	junction_8	30.1744925392292	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCTCGTCTTGCTTC	NA	False	NA	11	True	CATAAA	-13	NA	59292161	59312537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59309797_59311567_59311658_59312103
ES.13880.16	chr16	+	3840	8	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	-5	64	intron_retention	FALSE	canonical	2	2	junction_4	88.583870093919	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTATCCACTGTTA	NA	False	NA	20	True	AATAAA	-19	NA	59292161	59312888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59306895_59306999_59307790_59309797_59311567_59311658_59312103
ES.13880.17	chr16	+	2969	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	-2	6	intron_retention	FALSE	canonical	3	227	junction_8	28.5041115455297	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATATCTTTGAGCATA	NA	False	NA	NA	False	AATAAA	-28	NA	59292164	59312660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.18	chr16	+	5456	8	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	-1	-21	intron_retention	FALSE	canonical	3	227	junction_7	31.6833826270788	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGATTTTTTTCTTTACA	NA	False	NA	107	True	AATAAA	-1	NA	59292165	59312633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59311658_59312103
ES.13880.19	chr16	+	4704	8	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	227	junction_7	29.893689184529	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAATATACATATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59292166	59312652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59300783_59303367_59303472_59306895_59306999_59307790_59309797_59311567_59311658_59312103
ES.13880.2	chr16	+	2142	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	-6	66	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	90.0583144412552	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTATCCACTGTTATT	NA	False	NA	22	True	AATAAA	-21	NA	59292131	59312890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59311567_59311658_59312103
ES.13880.20	chr16	+	2223	11	NNC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	1	1444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.2838062738033	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGTACTGCTTTTGTT	NA	False	NA	NA	False	GATAAA	-16	NA	59292167	59314268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103_59312235_59313584
ES.13880.21	chr16	+	2827	10	NNC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	3	-27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	88.5200681717756	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTTGGATTTTTTTC	NA	False	NA	101	True	ATTAAA	-8	NA	59292169	59312627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_59292309_59295872_59296333_59299532_59299653_59299756_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.22	chr16	+	2829	9	NIC	ENSMUSG00000022724.16	novel	1753	9	NA	NA	3	-117	intron_retention	FALSE	canonical	1	2	junction_7	118.722101986109	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCTCGTCTTGCTTC	NA	False	NA	11	True	CATAAA	-13	NA	59292169	59312537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309852_59309930_59311567_59311658_59312103
ES.13880.23	chr16	+	5339	7	NNC	ENSMUSG00000022724.16	novel	1753	9	NA	NA	4	24	intron_retention	FALSE	canonical	0	0	junction_6	106.616133863501	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGAAGTGACTTTATTT	NA	False	NA	NA	False	ATTAAA	-38	NA	59292170	59312055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307770
ES.13880.25	chr16	+	5031	1	Genic_Genomic	ENSMUSG00000022724.16	novel	NA	NA	NA	NA	636	742	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATCTTCCTGCAGGA	NA	False	NA	NA	False	AATAAA	-23	NA	59308535	59313566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_59308500_59313600
ES.13880.26	chr16	+	3147	1	Antisense	novelGene_ENSMUSG00000022723.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59312994	59316141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_59313000_59316100
ES.13880.3	chr16	+	2241	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	-6	-76	-6	76	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTATTTTACATTCTA	NA	False	NA	32	True	AATAAA	-31	NA	59292131	59312900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.4	chr16	+	1877	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	1	281	1	-111	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTCTTGCTTCTTTGGA	NA	False	NA	17	True	CATAAA	-19	NA	59292138	59312543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.5	chr16	+	1617	7	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	-44	3708	3	-1858	5prime_fragment	FALSE	canonical	3	233	junction_3	29.8035232816525	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGCATGAGGCTCCC	NA	False	NA	NA	False	AATAAA	-10	NA	59292140	59308323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790
ES.13880.6	chr16	+	1894	9	NIC	ENSMUSG00000022724.16	novel	2159	10	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	90.0583144412552	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGAAAATATACATATCT	NA	False	NA	NA	False	AATAAA	-19	NA	59292140	59312651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59311567_59311658_59312103
ES.13880.8	chr16	+	5591	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	9	-3441	9	3441	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTGGCTGTTATGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	59292146	59316265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13880.9	chr16	+	2891	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	10	-742	10	742	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATCTTCCTGCAGGA	NA	False	NA	NA	False	AATAAA	-23	NA	59292147	59313566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ES.13881.1	chr16	+	4418	1	Intergenic	novelGene_11634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGATGATTTCTGTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	59318100	59322518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_59318100_59322500
ES.13882.1	chr16	-	1151	2	NNC	ENSMUSG00000022723.17	novel	4378	7	NA	NA	33539	296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAGGATCCATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	59312438	59310841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_59311656_59312101
ES.13882.2	chr16	-	1568	1	Genic_Genomic	ENSMUSG00000022723.17	novel	NA	NA	NA	NA	33539	267	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-45	NA	59312438	59310870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_59310900_59312400
ES.13883.1	chr16	-	10525	22	FSM	ENSMUSG00000022723.17	ENSMUST00000172910.3	10454	22	-67	-4	-67	4	multi-exon	FALSE	canonical	1	1	junction_14	2.60559314672466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGGATGCCTAATAAT	NA	False	NA	NA	False	AATAAA	-26	NA	59421409	59312446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_59314049_59315029_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59342446_59342577_59345223_59345334_59349585_59349619_59350466_59350594_59350693_59350840_59357060_59357188_59360167_59360302_59362422_59362459_59363538_59363654_59364391_59364529_59370764_59370913_59372534_59372651_59372892_59372938_59374469_59380606_59385575_59386007_59398160_59398228_59421107
ES.13883.2	chr16	-	2352	6	NNC	ENSMUSG00000022723.17	novel	4378	7	NA	NA	7639	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.91918358845308	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTCTGGGATGCCTA	NA	False	NA	NA	False	AATAAA	-21	NA	59338338	59312451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_59314046_59315029_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59338163
ES.13883.3	chr16	-	11473	21	NIC	ENSMUSG00000022723.17	novel	10454	22	NA	NA	-40	-2	intron_retention	FALSE	canonical	1	1	junction_13	2.42693221990232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTGGGATGCCT	NA	False	NA	NA	False	AATAAA	-20	NA	59421382	59312452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59342446_59342577_59345223_59345334_59349585_59349619_59350466_59350594_59350693_59350840_59357060_59357188_59360167_59360302_59362422_59362459_59363538_59363654_59364391_59364529_59370764_59370913_59372534_59372651_59372892_59372938_59374469_59380606_59385575_59386007_59398160_59398228_59421107
ES.13883.4	chr16	-	9448	22	FSM	ENSMUSG00000022723.17	ENSMUST00000172910.3	10454	22	-48	1054	-48	488	multi-exon	FALSE	canonical	1	1	junction_14	2.60559314672466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGACCTTAGTTTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	59421390	59313504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_59314049_59315029_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59342446_59342577_59345223_59345334_59349585_59349619_59350466_59350594_59350693_59350840_59357060_59357188_59360167_59360302_59362422_59362459_59363538_59363654_59364391_59364529_59370764_59370913_59372534_59372651_59372892_59372938_59374469_59380606_59385575_59386007_59398160_59398228_59421107
ES.13884.1	chr16	-	1948	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-260	8	-36	-8	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTGACTTATTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	59459790	59433319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ES.13884.2	chr16	-	5348	6	NIC	ENSMUSG00000022722.19	novel	1696	8	NA	NA	11	2	intron_retention	FALSE	canonical	3	88	junction_3	4.92341345003647	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTAGAGTGTTCTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	59459519	59433688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_59434208_59439157_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ES.13884.3	chr16	-	1540	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	-223	379	1	0	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACTAGAGTGTTCTG	NA	False	NA	NA	False	AATAAA	-10	NA	59459753	59433690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ES.13884.4	chr16	-	957	7	ISM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	61	5628	23	2642	5prime_fragment	FALSE	canonical	3	88	junction_4	10.7341614587364	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGTTTTAATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	59459469	59438939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ES.13885.1	chr16	-	164	1	Intergenic	novelGene_11635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	59542833	59542669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_59542700_59542800
ES.13886.1	chr16	-	133	1	Intergenic	novelGene_11636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	59881575	59881442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_59881400_59881600
ES.13887.1	chr16	-	1689	1	NIC	ENSMUSG00000055540.16	novel	1856	3	NA	NA	-38	-120001	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACGTTATCCCT	NA	False	NA	NA	False	NA	NA	NA	60425649	60423960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_60424000_60425600
ES.13888.1	chr16	+	5155	1	Intergenic	novelGene_11637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTGAGTTTTAATCA	NA	False	NA	NA	False	AATAAA	-22	NA	60581114	60586269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_60581100_60586300
ES.13889.1	chr16	+	2670	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	-186	-1823	-186	1823	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61197432	61200102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_61197400_61200100
ES.13889.2	chr16	+	2549	2	Genic_Genomic	ENSMUSG00000092029.2	novel	661	1	NA	NA	-166	1823	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61197452	61200102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_61197748_61197848
ES.13889.3	chr16	+	2270	2	Genic_Genomic	ENSMUSG00000092029.2	novel	661	1	NA	NA	128	1823	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61197746	61200102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_61198268_61198353
ES.1389.1	chr1	-	177	1	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGAGATCAC	6770	False	NA	NA	False	NA	NA	NA	134326088	134325911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134325900_134326100
ES.13890.1	chr16	-	179	1	Intergenic	novelGene_11638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61527795	61527616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_61527600_61527800
ES.13891.1	chr16	-	176	1	Intergenic	novelGene_11639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTAACACATGAC	NA	False	NA	NA	False	NA	NA	NA	61571734	61571558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_61571600_61571700
ES.13892.1	chr16	+	142	1	Intergenic	novelGene_11640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	62539031	62539173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_62539000_62539200
ES.13893.1	chr16	-	4276	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	12	-475	1	475	multi-exon	TRUE	canonical	3	18	junction_4	5.74804314527997	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGCCTTGTGATTGTT	NA	False	NA	NA	False	AATATA	-18	NA	62607128	62552331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
ES.13893.10	chr16	-	3965	7	NNC	ENSMUSG00000050312.13	novel	3813	6	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.6315302143309	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATGCCTTTTTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	62607155	62552808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_62555782_62589969_62590092_62591020_62591176_62592061_62592201_62596650_62596995_62606150_62606261_62607033
ES.13893.11	chr16	-	178	1	Intergenic	novelGene_11641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTTAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	62600672	62600494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_62600500_62600700
ES.13893.12	chr16	-	1535	1	FSM	ENSMUSG00000050312.13	ENSMUST00000231289.2	1530	1	-5	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGTGACAAATATGA	NA	False	NA	NA	False	AATAAA	-16	NA	62607134	62605599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62605600_62607100
ES.13893.2	chr16	-	3829	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	-15	-1	-15	1	multi-exon	FALSE	canonical	3	18	junction_4	5.74804314527997	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGCCTTTTTTTGACCT	NA	False	NA	NA	False	ATTAAA	-19	NA	62607155	62552805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
ES.13893.3	chr16	-	3646	4	NNC	ENSMUSG00000050312.13	novel	3813	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5303793326209	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607131	62552806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_62555782_62596531_62596995_62606150_62606261_62607033
ES.13893.4	chr16	-	4481	5	NIC	ENSMUSG00000050312.13	novel	3565	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	19	junction_3	3.35410196624968	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607127	62552806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62555782_62589969_62591176_62596650_62596747_62606150_62606261_62607033
ES.13893.5	chr16	-	3556	6	FSM	ENSMUSG00000050312.13	ENSMUST00000143314.8	3565	6	9	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_4	5.49181208709839	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607131	62552806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596747_62606150_62606261_62607033
ES.13893.6	chr16	-	3590	7	NIC	ENSMUSG00000050312.13	novel	3565	6	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	12.3917535302941	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607127	62552806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62555782_62589969_62590092_62591020_62591176_62592061_62592100_62596650_62596747_62606150_62606261_62607033
ES.13893.7	chr16	-	3431	5	NIC	ENSMUSG00000050312.13	novel	3813	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	11.9660979437743	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607102	62552806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62555782_62589969_62590092_62591020_62591176_62606150_62606261_62607033
ES.13893.8	chr16	-	3671	5	NIC	ENSMUSG00000050312.13	novel	3813	6	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	13.1029576813787	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATGCCTTTTTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	62607110	62552808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62607033
ES.13893.9	chr16	-	3809	7	NIC	ENSMUSG00000050312.13	novel	3813	6	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	12.3928742966809	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGATGCCTTTTTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	62607100	62552808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62555782_62589969_62590092_62591020_62591176_62592061_62592100_62596650_62596995_62606150_62606261_62607033
ES.13894.1	chr16	-	3753	8	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	10	375	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	20.735457160947	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCTTTGTTTTTATT	NA	False	NA	NA	False	TATAAA	-16	NA	62667393	62613672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62667047
ES.13894.10	chr16	-	3419	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	18.450948485105	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCATTTATCTAATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	62667369	62614051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62667047
ES.13894.11	chr16	-	3892	9	NNC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	19753	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5925703347473	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACCATTTATCTAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	62647603	62614052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_62616072_62618719_62619689_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526
ES.13894.12	chr16	-	2286	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	52	1190	5	478	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATACCTTTAAGAAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	62667351	62615237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ES.13894.13	chr16	-	6883	8	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	5	-1867	intron_retention	FALSE	canonical	3	43	junction_2	7.39553091745416	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCTGATGGTTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	62667351	62617582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ES.13894.14	chr16	-	5282	6	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	33802	3556	-10402	-1888	internal_fragment	FALSE	canonical	3	30	junction_1	9.05538513813742	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62633601	62617603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521
ES.13894.15	chr16	-	7361	1	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	-1770	-1893	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62624969	62617608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62617600_62625000
ES.13894.16	chr16	-	4235	1	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	13549	-3605	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGGAATTTCTATCCAA	NA	False	NA	NA	False	NA	NA	NA	62653807	62649572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62649600_62653800
ES.13894.2	chr16	-	3823	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	9	373	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	12.6830349285965	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTGCTTTGTTTTTA	NA	False	NA	NA	False	TATAAA	-14	NA	62667394	62613674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ES.13894.3	chr16	-	3535	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	0	-7	0	7	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATTTTAAAAGATTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	62667403	62614040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ES.13894.5	chr16	-	3464	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	12.6830349285965	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAATTTTAAAAGATTTA	NA	False	NA	NA	False	AATAAA	-24	NA	62667402	62614041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ES.13894.6	chr16	-	2953	7	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	137	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	19.9617690153509	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTTATCTAATTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	62667219	62614048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667047
ES.13894.8	chr16	-	3178	1	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	5971	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTATCTAATTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	62617228	62614050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62614000_62617200
ES.13894.9	chr16	-	3191	8	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	17.6218787944106	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCATTTATCTAATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	62667391	62614051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667047
ES.13895.1	chr16	+	3694	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	-391	0	-391	0	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	62674278	62749709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.11	chr16	+	1664	3	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	15	39043	15	-10071	5prime_fragment	FALSE	canonical	3	309	junction_2	1.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCCTCTGATGTGC	NA	False	NA	NA	False	AATAAA	-24	NA	62674684	62710666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_62674868_62705763_62705922_62709343
ES.13895.12	chr16	+	3405	16	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.005225102245	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674686	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62696680_62696806_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.13	chr16	+	2300	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	18	-44	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	83.8301246326067	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTGCACTCATTGC	NA	False	NA	2	True	TATAAA	-12	NA	62674687	62748709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748380
ES.13895.14	chr16	+	2877	14	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	87.5640087096392	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674688	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62739921_62746818_62746917_62748395
ES.13895.15	chr16	+	2281	14	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	19	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.935452958308	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTCTTGCACTCATT	NA	False	NA	0	True	TATAAA	-10	NA	62674688	62748707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62719214_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.16	chr16	+	3268	14	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.935452958308	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATATGAGCAATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	62674690	62749702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62719220_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.18	chr16	+	3313	16	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	109.648813136405	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGCAATTTCTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	62674690	62749708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62740352_62740385_62744878_62745028_62746690_62746917_62748395
ES.13895.19	chr16	+	3280	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.6660578606706	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674701	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705748_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.2	chr16	+	3253	16	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	-35	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	82.8507091098199	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674634	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395_62748858_62748936
ES.13895.21	chr16	+	3223	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	60	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.3175640457103	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674729	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734337_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.22	chr16	+	5453	1	Intergenic	novelGene_11642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	62686732	62692185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_62686700_62692200
ES.13895.23	chr16	+	2147	14	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	31092	960	-12750	-4	3prime_fragment	FALSE	canonical	3	266	junction_4	24.839603804404	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACACATGAAACACTTAAA	NA	False	NA	42	True	ATTAAA	-6	NA	62705761	62748749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.24	chr16	+	2127	1	Intergenic	novelGene_11643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATATATACTTCCTTTC	NA	False	NA	NA	False	AATAAA	-40	NA	62710111	62712238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_62710100_62712200
ES.13895.25	chr16	+	2328	7	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	55689	6	-11471	-6	3prime_fragment	FALSE	canonical	3	292	junction_1	23.3339285638364	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62730358	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.3	chr16	+	4230	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.7006239112383	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	62674650	62749709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62708435_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.4	chr16	+	3361	16	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.005225102245	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAGCAATTTCTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	62674667	62749707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62675449_62675508_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.5	chr16	+	4821	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	85.4188061786138	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGAGCAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	62674668	62749703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62676391_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.7	chr16	+	3297	14	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.935452958308	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCAATTTCTTTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	62674675	62749710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62719214_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13895.8	chr16	+	3306	15	NNC	ENSMUSG00000022912.9	novel	3303	15	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	83.8301246326067	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAGCAATTTCTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	62674679	62749707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748380
ES.13895.9	chr16	+	2340	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	11	952	11	4	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACTTAAATTTCAATT	NA	False	NA	50	True	ATTAAA	-14	NA	62674680	62748757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ES.13896.1	chr16	-	177	1	Intergenic	novelGene_11644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	62902849	62902672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_62902700_62902800
ES.13897.1	chr16	-	5338	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	203	-19	203	19	multi-exon	FALSE	canonical	3	170	junction_1	18.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTATGTATTTGTGT	NA	False	NA	NA	False	TTTAAA	-27	NA	64591321	64582479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64587357_64589286_64589526_64591099
ES.13897.2	chr16	-	4649	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	188	685	188	-685	multi-exon	FALSE	canonical	3	170	junction_1	18.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGCCATGTGTAATTT	NA	False	NA	NA	False	ACTAAA	-15	NA	64591336	64583183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64587357_64589286_64589526_64591099
ES.13897.3	chr16	-	3991	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	219	1312	219	-1312	multi-exon	FALSE	canonical	3	170	junction_1	18.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTAAGGTGTTGTGTC	NA	False	NA	2	True	NA	NA	NA	64591305	64583810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64587357_64589286_64589526_64591099
ES.13897.4	chr16	-	1506	2	ISM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	2187	3403	2187	-3403	3prime_fragment	FALSE	canonical	3	170	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGATAATAACAAAG	NA	False	NA	NA	False	NA	NA	NA	64589337	64585901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_64587357_64589286
ES.13897.5	chr16	-	1728	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	224	3570	224	-3570	multi-exon	FALSE	canonical	3	170	junction_1	18.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAACAAGTTACAGAATG	NA	False	NA	22	True	AATAAA	-40	NA	64591300	64586068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64587357_64589286_64589526_64591099
ES.13897.6	chr16	-	1351	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	202	3969	202	-3969	multi-exon	FALSE	canonical	3	170	junction_1	18.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTGTGTGCCTTAGA	NA	False	NA	-19	True	AATAAA	-19	NA	64591322	64586467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64587357_64589286_64589526_64591099
ES.13897.7	chr16	-	1112	2	NIC	ENSMUSG00000059920.10	novel	5522	3	NA	NA	202	-3969	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTGTGTGCCTTAGA	NA	False	NA	-19	True	AATAAA	-19	NA	64591322	64586467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64587357_64591099
ES.13897.8	chr16	-	1376	2	Genic_Genomic	ENSMUSG00000059920.10	novel	5522	3	NA	NA	225	-7198	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGGGTAAGTTC	NA	False	NA	NA	False	AAAAAG	-11	NA	64591299	64589696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_64589786_64590012
ES.13898.1	chr16	+	4727	1	Intergenic	novelGene_11647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTCTCAAAAGTATAGC	NA	False	NA	NA	False	NA	NA	NA	64662752	64667479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_64662800_64667500
ES.13899.1	chr16	-	5857	6	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-15	5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	84.4194290433192	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAGTTTTATGTAGTA	NA	False	NA	2	True	AATAAA	-25	NA	64672030	64600704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64634987_64635070_64671829
ES.13899.10	chr16	-	6172	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-60	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	57.4704893215391	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAAGTGTTCAGTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	64672075	64600712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64671829
ES.13899.11	chr16	-	5222	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-62	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.230765882794	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGCAAGTGTTCAGTT	NA	False	NA	-8	True	AATAAA	-15	NA	64672077	64600714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64605965_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.12	chr16	-	6108	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-95	-162	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	59.4196421863261	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTTCCTTGTTGAAC	NA	False	NA	NA	False	NA	NA	NA	64672110	64600875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64650826_64650973_64671829
ES.13899.13	chr16	-	5368	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-62	955	-62	-951	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTGTGTGCAAAGATG	NA	False	NA	NA	False	CATAAA	-14	NA	64672077	64601664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.14	chr16	-	5286	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-124	1099	-124	-1095	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGCACAATGAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	64672139	64601808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.15	chr16	-	5155	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-78	-1098	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	59.4196421863261	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCATTTGCACAATGAA	NA	False	NA	NA	False	AATAAA	-17	NA	64672093	64601811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64650826_64650973_64671829
ES.13899.16	chr16	-	6397	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-9	-1099	intron_retention	FALSE	canonical	3	157	junction_3	6.45865974597561	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTTGCACAATGA	NA	False	NA	NA	False	AATAAA	-16	NA	64672024	64601812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.17	chr16	-	5086	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-74	-1099	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	57.4704893215391	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTTGCACAATGA	NA	False	NA	NA	False	AATAAA	-16	NA	64672089	64601812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64671829
ES.13899.18	chr16	-	8450	7	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-113	-1102	intron_retention	FALSE	canonical	3	158	junction_2	10.6262254195301	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGTTCATTTGCACAA	NA	False	NA	NA	False	AATAAA	-13	NA	64672128	64601815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.19	chr16	-	5062	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-50	-1103	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	59.4110551108778	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGTTCATTTGCACA	NA	False	NA	NA	False	AATAAA	-12	NA	64672065	64601816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.2	chr16	-	9482	1	Genic_Genomic	ENSMUSG00000047141.6	novel	NA	NA	NA	NA	-3502	5	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAGTTTTATGTAGTA	NA	False	NA	2	True	AATAAA	-25	NA	64610186	64600704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_64600700_64610200
ES.13899.20	chr16	-	5348	10	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-71	-1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.1490476691515	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTGGAAACTGGTTC	NA	False	NA	NA	False	AATAAA	-3	NA	64672086	64601825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634710_64634843_64634987_64635070_64650826_64650973_64671829
ES.13899.21	chr16	-	5200	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-92	-1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.8021511476458	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTGGAAACTGGTTC	NA	False	NA	NA	False	AATAAA	-3	NA	64672107	64601825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650863_64650973_64671829
ES.13899.22	chr16	-	7262	7	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-59	-1112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	79.990450818971	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTGGAAACTGGTTC	NA	False	NA	NA	False	AATAAA	-3	NA	64672074	64601825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64613383_64613545_64614920_64671829
ES.13899.23	chr16	-	5113	10	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-53	-1120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.191247983643	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCCTGTTTGGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	64672068	64601833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64606074_64606150_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.24	chr16	-	4965	7	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-116	-1120	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	79.3214276780801	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCCTGTTTGGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	64672131	64601833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64671829
ES.13899.25	chr16	-	7447	8	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-106	-1120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.0864170344672	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCCTGTTTGGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	64672121	64601833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64613383_64613545_64614920_64650826_64650973_64671829
ES.13899.26	chr16	-	5117	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-116	-1120	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	60.1067078330748	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCCTGTTTGGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	64672131	64601833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64634987_64635070_64650826_64650973_64671829
ES.13899.27	chr16	-	4048	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-151	2364	-151	-2360	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTACTAACAATTGTAAC	NA	False	NA	NA	False	AATAAA	-20	NA	64672166	64603073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.28	chr16	-	5193	8	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-74	-2366	intron_retention	FALSE	canonical	0	0	junction_6	57.8901140620957	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCTGTCTACTAACAAT	NA	False	NA	NA	False	AATAAA	-14	NA	64672089	64603079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650828_64650973_64671829
ES.13899.29	chr16	-	3895	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-134	2500	-134	-2496	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTTGTCCTGCAT	NA	False	NA	2	True	AATAAA	-26	NA	64672149	64603209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.3	chr16	-	6397	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-131	-5	-131	5	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAGTTTTATGTAGTA	NA	False	NA	2	True	AATAAA	-25	NA	64672146	64600704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.30	chr16	-	5556	6	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-8163	-2501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.385378554191	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTTGTTTTCTTGTCC	NA	False	NA	-3	True	AATAAA	-21	NA	64614847	64603214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64613383_64613545
ES.13899.31	chr16	-	3701	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-87	-2501	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	59.4110551108778	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTTGTTTTCTTGTCC	NA	False	NA	-3	True	AATAAA	-21	NA	64672102	64603214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.32	chr16	-	5081	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-95	-2501	intron_retention	FALSE	canonical	3	157	junction_3	6.45865974597561	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTTGTTTTCTTGTCC	NA	False	NA	-3	True	AATAAA	-21	NA	64672110	64603214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.34	chr16	-	3702	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-86	-2505	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	60.1067078330748	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672101	64603218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64634987_64635070_64650826_64650973_64671829
ES.13899.35	chr16	-	3939	10	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-55	-2505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.1490476691515	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672070	64603218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634710_64634843_64634987_64635070_64650826_64650973_64671829
ES.13899.36	chr16	-	3786	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-86	-2505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.8021511476458	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672101	64603218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612283_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.37	chr16	-	3657	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-51	-2505	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	57.4704893215391	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672066	64603218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64671829
ES.13899.38	chr16	-	4968	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-59	-2505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.8021511476458	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAATTTGTTTTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	64672074	64603218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64613626_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.39	chr16	-	1226	8	ISM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-73	6338	-73	-6334	5prime_fragment	FALSE	canonical	3	157	junction_3	6.45865974597561	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGATCTAGAGATTGTC	NA	False	NA	NA	False	TATAAA	-20	NA	64672088	64607047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.40	chr16	-	178	1	Intergenic	novelGene_11645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	64638358	64638180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64638200_64638400
ES.13899.41	chr16	-	2706	1	Intergenic	novelGene_11646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-39	NA	64644146	64641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64641400_64644100
ES.13899.5	chr16	-	8533	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.8021511476458	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGTTCAGTTTTATG	NA	False	NA	-3	True	AATAAA	-20	NA	64672000	64600709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64613393_64613554_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.6	chr16	-	6428	10	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.167685828421	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGTTCAGTTTTATG	NA	False	NA	-3	True	AATAAA	-20	NA	64672075	64600709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64625767_64625875_64634987_64635070_64650826_64650973_64671829
ES.13899.7	chr16	-	6260	9	NNC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-53	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.8021511476458	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGTGTTCAGTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	64672068	64600711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612283_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.8	chr16	-	8707	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	157	junction_4	11.3730795642829	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAAGTGTTCAGTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	64672015	64600712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64614920_64634987_64635070_64650826_64650973_64671829
ES.13899.9	chr16	-	6220	8	NIC	ENSMUSG00000047141.6	novel	6261	9	NA	NA	-104	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	59.4110551108778	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAAGTGTTCAGTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	64672119	64600712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_64603640_64604869_64607166_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ES.139.1	chr1	-	93	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	0	True	NA	NA	NA	15874846	15874753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_15874800_15874800
ES.1390.1	chr1	+	4538	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	3127	False	NA	NA	False	NA	NA	NA	134328674	134333212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134328700_134333200
ES.1390.10	chr1	+	2567	9	NNC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	172.551758539286	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8181	False	NA	28	True	AATAAA	-16	NA	134333728	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134336970_134337425_134338230_134338331_134338644
ES.1390.12	chr1	+	3038	7	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	291	junction_1	61.4692786863668	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATCTCAAGGAATCAT	8181	False	NA	27	True	AATAAA	-15	NA	134333728	134339462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230
ES.1390.13	chr1	+	1402	7	NNC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	1	33	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	150.738920727934	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGCTCGGTGGTTAC	8186	False	NA	NA	False	NA	NA	NA	134333733	134337770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134336970
ES.1390.14	chr1	+	1834	7	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	2	-11	intron_retention	FALSE	canonical	0	0	junction_6	154.191439451093	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8187	False	NA	28	True	AATAAA	-16	NA	134333734	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134338230
ES.1390.15	chr1	+	2361	9	NNC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	2	-11	intron_retention	FALSE	canonical	2	15	junction_6	170.533308696571	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8187	False	NA	28	True	AATAAA	-16	NA	134333734	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134335996_134336141_134336226_134337338_134337425_134338230
ES.1390.16	chr1	+	4006	5	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	400	junction_3	24.963723680573	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8188	False	NA	43	True	AATAAA	-31	NA	134333735	134339478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134337425_134338230
ES.1390.17	chr1	+	3306	6	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	337	junction_4	44.6793016955279	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8188	False	NA	43	True	AATAAA	-31	NA	134333735	134339478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230
ES.1390.18	chr1	+	1570	7	NNC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	3	203	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	150.738920727934	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAGTAAAGAAG	8188	False	NA	NA	False	NA	NA	NA	134333735	134337940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134336970
ES.1390.19	chr1	+	3434	5	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	3	-4	intron_retention	FALSE	canonical	3	337	junction_3	49.6638701673561	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGAATCATTGTCGTCG	8188	False	NA	35	True	AATAAA	-23	NA	134333735	134339470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230
ES.1390.2	chr1	+	2998	8	NIC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	-95	2	intron_retention	TRUE	canonical	3	35	junction_4	137.399165253086	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTGTCGTCGTGTCTG	7654	False	NA	41	True	AATAAA	-29	NA	134333201	134339476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.20	chr1	+	4802	4	NNC	ENSMUSG00000026456.19	novel	2341	5	NA	NA	3	-2	intron_retention	FALSE	canonical	2	13	junction_1	200.393501779762	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8188	False	NA	37	True	AATAAA	-25	NA	134333735	134339472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134334201_134334340_134334410_134334783_134334891_134335311
ES.1390.21	chr1	+	1044	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	217	576	3	195	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCAGCCTTCTGTGTCT	8188	False	NA	NA	False	NA	NA	NA	134333735	134338902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.22	chr1	+	2767	7	NIC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	3	-9	intron_retention	FALSE	canonical	3	35	junction_4	147.536153761262	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCAAGGAATCATTGT	8188	False	NA	30	True	AATAAA	-18	NA	134333735	134339465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230
ES.1390.23	chr1	+	2532	8	ISM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	218	-16	4	12	intron_retention	FALSE	canonical	3	35	junction_5	138.679192265267	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGGTCCTTGTCCTC	8189	False	NA	55	True	AATAAA	-43	NA	134333736	134339490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230
ES.1390.24	chr1	+	2049	10	NNC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_6	163.478846745789	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGGAATCATTGTCGT	8190	False	NA	33	True	AATAAA	-21	NA	134333737	134339468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134335996_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.25	chr1	+	3085	7	NNC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	2	-11	intron_retention	FALSE	canonical	2	10	junction_6	150.738920727934	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8196	False	NA	28	True	AATAAA	-16	NA	134333743	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134336970
ES.1390.26	chr1	+	2126	7	NNC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	8	junction_6	191.673115833529	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8203	False	NA	37	True	AATAAA	-25	NA	134333750	134339472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134336970_134337425_134338644
ES.1390.27	chr1	+	3713	6	NIC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	-3	-11	intron_retention	FALSE	canonical	3	291	junction_1	61.3103580155915	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8207	False	NA	28	True	AATAAA	-16	NA	134333754	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134337425_134338230
ES.1390.28	chr1	+	1960	9	NNC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	138.033001035984	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8210	False	NA	37	True	AATAAA	-25	NA	134333757	134339472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134336970_134337425_134338230_134338331_134338644
ES.1390.29	chr1	+	4088	5	FSM	ENSMUSG00000026456.19	ENSMUST00000133686.8	2341	5	-8	-1739	0	2	multi-exon	FALSE	canonical	3	337	junction_4	47.3253367658382	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTGTCGTCGTGTCTG	8210	False	NA	41	True	AATAAA	-29	NA	134333757	134339476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141
ES.1390.3	chr1	+	2410	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	-94	2	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTGTCGTCGTGTCTG	7655	False	NA	41	True	AATAAA	-29	NA	134333202	134339476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.30	chr1	+	2963	7	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	337	junction_4	41.0473980769657	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8211	False	NA	37	True	AATAAA	-25	NA	134333758	134339472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230_134338331_134338644
ES.1390.31	chr1	+	1009	7	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	240	1708	1	33	5prime_fragment	FALSE	canonical	3	291	junction_1	57.4129776270139	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGCTCGGTGGTTAC	8211	False	NA	NA	False	NA	NA	NA	134333758	134337770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338
ES.1390.32	chr1	+	2694	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	2	-11	intron_retention	FALSE	canonical	3	291	junction_1	56.9811999071373	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8212	False	NA	28	True	AATAAA	-16	NA	134333759	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134337425_134338230_134338331_134338644
ES.1390.33	chr1	+	2004	10	NNC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	166.609323468606	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8218	False	NA	28	True	AATAAA	-16	NA	134333765	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134335984_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.34	chr1	+	1168	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	353	575	106	196	3prime_fragment	FALSE	canonical	3	337	junction_4	39.0227563122351	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCAGCCTTCTGTGTCTC	8324	False	NA	NA	False	NA	NA	NA	134333871	134338903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.36	chr1	+	2509	13	Fusion	ENSMUSG00000026456.19_ENSMUSG00000026457.15	novel	1837	9	NA	NA	277	-992	multi-exon	FALSE	canonical	0	0	junction_6	363.53185516846	888	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTTGTCTCCACTG	8780	False	NA	27	True	AATAAA	-35	NA	134334327	134360094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.37	chr1	+	3169	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	-42	-4	-42	4	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTTCCATTCTTTC	NA	False	NA	12	True	NA	NA	NA	134343073	134361093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.38	chr1	+	2145	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	-17	995	-17	-992	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTTGTCTCCACTG	NA	False	NA	27	True	AATAAA	-35	NA	134343098	134360094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.39	chr1	+	2021	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	4	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	359.222857324656	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343119	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355901_134356008_134358794_134358989_134359267
ES.1390.4	chr1	+	1729	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	106	2	106	2	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTGTCGTCGTGTCTG	8077	False	NA	41	True	AATAAA	-29	NA	134333624	134339476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.40	chr1	+	2086	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	12	-1014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	365.268198920816	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGCTTGGCATTCAAAGA	NA	False	NA	5	True	AATAAA	-13	NA	134343127	134360072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343316_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.41	chr1	+	1724	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	17	1382	17	-1379	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTATGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	134343132	134359707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.42	chr1	+	2770	7	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	17	-1013	intron_retention	FALSE	canonical	0	0	junction_5	381.322880101482	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343132	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134352661_134353646_134353834_134355819_134356012_134358794_134358989_134359267
ES.1390.43	chr1	+	1823	7	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	20	-1015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	475.732563760588	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGCTTGGCATTCAAAG	NA	False	NA	4	True	AATAAA	-12	NA	134343135	134360071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353720_134353834_134358794_134358989_134359267
ES.1390.45	chr1	+	1484	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	20	1619	20	-1616	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCTGAGTTGTCTGTT	NA	False	NA	15	True	TTTAAA	-27	NA	134343135	134359470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.46	chr1	+	1547	9	NNC	ENSMUSG00000026457.15	novel	3446	8	NA	NA	20	-1623	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	420.759135373197	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGGAAGAGTCTGAGTT	NA	False	NA	8	True	TTTAAA	-20	NA	134343135	134359463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134343657_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.48	chr1	+	2155	9	NNC	ENSMUSG00000026457.15	novel	3446	8	NA	NA	22	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	420.759135373197	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343137	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134343657_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.49	chr1	+	1887	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	26	-1013	combination_of_known_splicesites	FALSE	canonical	3	56	junction_6	364.344807687565	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343141	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134359267
ES.1390.5	chr1	+	2218	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	200	2	-14	-2	multi-exon	FALSE	canonical	3	35	junction_5	130.869925880624	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCATTGTCGTCGTG	8171	False	NA	37	True	AATAAA	-25	NA	134333718	134339472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
ES.1390.50	chr1	+	2021	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	26	-999	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	343.022876609638	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTAACTGTGTTGTC	NA	False	NA	20	True	AATAAA	-28	NA	134343141	134360087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353720_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.52	chr1	+	5055	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	-24	0	intron_retention	FALSE	canonical	3	879	junction_4	81.493694370928	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134343169	134361089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134356008_134358794_134358989_134359267
ES.1390.53	chr1	+	3471	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	-21	-4	-21	1	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTTGGTTCCATTCT	NA	False	NA	9	True	NA	NA	NA	134343172	134361090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.54	chr1	+	5036	6	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	-21	-1011	intron_retention	FALSE	canonical	3	13	junction_5	407.67467421953	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGGCATTCAAAGAGTT	NA	False	NA	8	True	AATAAA	-16	NA	134343172	134360075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355901
ES.1390.55	chr1	+	2468	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	-13	991	-13	-991	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCTCCACTGT	NA	False	NA	28	True	AATAAA	-36	NA	134343180	134360095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.56	chr1	+	1236	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	-7	-1619	combination_of_known_splicesites	FALSE	canonical	3	56	junction_6	364.344807687565	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGAGTCTGAGTTGTCT	NA	False	NA	12	True	TTTAAA	-24	NA	134343186	134359467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134359267
ES.1390.57	chr1	+	1341	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	1	-1626	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	343.022876609638	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGAGGAAGAGTCTGA	NA	False	NA	5	True	TTTAAA	-17	NA	134343194	134359460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353720_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.59	chr1	+	1404	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	5	-1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	359.827282830788	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAAGAGTCTGAGTTGT	NA	False	NA	10	True	TTTAAA	-22	NA	134343198	134359465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358806_134358989_134359267
ES.1390.6	chr1	+	3651	7	NIC	ENSMUSG00000026456.19	novel	2420	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	35	junction_5	148.885582467433	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8171	False	NA	43	True	AATAAA	-31	NA	134333718	134339478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134337425_134338230
ES.1390.60	chr1	+	1828	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	-2	-1013	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	382.724008479566	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343206	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134358794_134358989_134359267
ES.1390.61	chr1	+	1808	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	20	1618	5	-1618	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGTCTGAGTTGTCTG	NA	False	NA	13	True	TTTAAA	-25	NA	134343213	134359468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.62	chr1	+	2831	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_6	364.344807687565	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134343213	134361089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134359267
ES.1390.63	chr1	+	1961	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	7	-1005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	367.270405859781	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCAAAGAGTTAACTGT	NA	False	NA	14	True	AATAAA	-22	NA	134343215	134360081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352654_134353693_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.64	chr1	+	2030	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	8	-1013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	365.138274060216	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343216	134360073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359243
ES.1390.65	chr1	+	2941	9	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	343.573477403306	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134343226	134361089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353707_134353777_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.66	chr1	+	1487	8	NNC	ENSMUSG00000026457.15	novel	3446	8	NA	NA	158	-1619	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	433.370322858746	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGAGTCTGAGTTGTCT	NA	False	NA	12	True	TTTAAA	-24	NA	134343459	134359467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353720_134353834_134355819_134356008_134358794_134358989_134359267
ES.1390.67	chr1	+	3004	1	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	14784	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	598	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134358085	134361089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134358100_134361100
ES.1390.7	chr1	+	1515	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	-7	-11	combination_of_known_splicesites	FALSE	canonical	1	8	junction_7	142.066095568943	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCTCAAGGAATCATT	8178	False	NA	28	True	AATAAA	-16	NA	134333725	134339463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338644
ES.1390.8	chr1	+	1941	8	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	208	2	-6	2	intron_retention	FALSE	canonical	3	291	junction_1	56.9597064885811	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTGTCGTCGTGTCTG	8179	False	NA	41	True	AATAAA	-29	NA	134333726	134339476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230
ES.13900.1	chr16	+	4559	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-129	-5	-129	5	multi-exon	FALSE	canonical	3	981	junction_2	152	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTGTGAGCCAGTG	NA	False	NA	26	True	AATAAA	-35	NA	64672229	64679875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.10	chr16	+	1072	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-9	3362	-9	159	multi-exon	FALSE	canonical	3	981	junction_2	152	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCATTTTTATATTTAT	NA	False	NA	26	True	ATTAAA	-19	NA	64672349	64676508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.11	chr16	+	4977	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-706	-3511	0	-10	multi-exon	FALSE	canonical	3	981	junction_1	0	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGAAATCATATTTTG	NA	False	NA	11	True	AATAAA	-20	NA	64672358	64679860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.14	chr16	+	3845	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	11	569	11	-569	multi-exon	FALSE	canonical	3	981	junction_2	152	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTCTGATTGGGA	NA	False	NA	NA	False	AATAAA	-18	NA	64672369	64679301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.16	chr16	+	2221	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	12	2192	12	1329	multi-exon	FALSE	canonical	3	981	junction_2	152	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAGTTGAAAACATTG	NA	False	NA	NA	False	ATTAAA	-7	NA	64672370	64677678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.17	chr16	+	4341	4	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	13	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	603.411597133794	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCGTACTCCTGTGCT	NA	False	NA	32	True	ATTAAA	-14	NA	64672371	64679742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673389_64673736_64673794_64675913
ES.13900.18	chr16	+	1608	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-691	-157	15	157	multi-exon	FALSE	canonical	3	981	junction_1	0	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTCATTTTTATATTT	NA	False	NA	24	True	ATTAAA	-17	NA	64672373	64676506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.19	chr16	+	5434	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	15	-1024	15	1024	multi-exon	FALSE	canonical	3	981	junction_2	152	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTATTTGACTCTTC	NA	False	NA	NA	False	NA	NA	NA	64672373	64680894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.21	chr16	+	6809	2	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	15	126	15	-126	intron_retention	FALSE	canonical	3	1285	junction_1	0	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTACTCCTGTGCTTC	NA	False	NA	34	True	ATTAAA	-16	NA	64672373	64679744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_64672600_64673161
ES.13900.22	chr16	+	4846	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-691	-3395	15	-126	multi-exon	FALSE	canonical	3	981	junction_1	0	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTACTCCTGTGCTTC	NA	False	NA	34	True	ATTAAA	-16	NA	64672373	64679744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.23	chr16	+	2647	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	15	-1760	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	1149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTTTCTATTTTCTCA	NA	False	NA	NA	False	TTTAAA	-40	NA	64672373	64678110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673389_64675916
ES.13900.24	chr16	+	4265	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	17	-130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.5	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTCGTACTCCTGTG	NA	False	NA	30	True	ATTAAA	-12	NA	64672375	64679740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672595_64673169_64673389_64675913
ES.13900.26	chr16	+	5985	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-677	-4548	29	1027	multi-exon	FALSE	canonical	3	981	junction_1	0	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTATTTGACTCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	64672387	64680897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.27	chr16	+	6104	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-674	-4670	32	1149	multi-exon	FALSE	canonical	3	981	junction_1	0	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAAAGCAGTGCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	64672390	64681019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.28	chr16	+	4643	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	640.5	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATATTTTGTTT	NA	False	NA	14	True	AATAAA	-23	NA	64672393	64679863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673649_64675913
ES.13900.3	chr16	+	2440	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-77	2062	-77	1459	multi-exon	FALSE	canonical	3	981	junction_2	152	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATTTGTGGGTTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	64672281	64677808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.31	chr16	+	2917	5	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	38	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	576.605801219516	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	8	True	AATAAA	-17	NA	64672396	64679857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673389_64675913_64676030_64677424_64678078_64678139
ES.13900.32	chr16	+	4041	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	-665	-2616	41	-905	multi-exon	FALSE	canonical	3	981	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTACCTGTTAATGTTT	NA	False	NA	4	True	TATAAA	-14	NA	64672399	64678965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64673389_64675913
ES.13900.33	chr16	+	1008	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	42	153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	490.5	1073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGTTCATTTTTAT	NA	False	NA	20	True	ATTAAA	-13	NA	64672400	64676502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672593_64673161_64673389_64675913
ES.13900.34	chr16	+	1254	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	50	3121	50	400	multi-exon	FALSE	canonical	3	981	junction_2	152	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGTTGCCATGTATGG	NA	False	NA	NA	False	NA	NA	NA	64672408	64676749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.35	chr16	+	3948	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	52	425	52	-425	multi-exon	FALSE	canonical	3	981	junction_2	152	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAGAAACAAGTTTTCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	64672410	64679445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.36	chr16	+	3251	5	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	53	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	576.605801219516	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	8	True	AATAAA	-17	NA	64672411	64679857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673389_64675913_64677481_64677744_64678078_64678921
ES.13900.37	chr16	+	4093	1	NIC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	55	157	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1074	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTCATTTTTATATTT	NA	False	NA	24	True	ATTAAA	-17	NA	64672413	64676506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_64672400_64676500
ES.13900.38	chr16	+	4133	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	64	-129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCGTACTCCTGTGC	NA	False	NA	31	True	ATTAAA	-13	NA	64672422	64679741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672574_64673197_64673409_64675970
ES.13900.39	chr16	+	4816	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	96	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.5	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTGAAATCATATT	NA	False	NA	8	True	AATAAA	-17	NA	64672454	64679857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672899_64672960_64673389_64675913
ES.13900.4	chr16	+	4368	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-60	117	-60	-117	multi-exon	FALSE	canonical	3	981	junction_2	152	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTTCTTTTTTACT	NA	False	NA	43	True	ATTAAA	-25	NA	64672298	64679753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.40	chr16	+	2665	2	NNC	ENSMUSG00000054604.8	novel	760	2	NA	NA	257	1459	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_1	0	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATTTGTGGGTTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	64672615	64677808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64673389_64675916
ES.13900.41	chr16	+	4411	3	NNC	ENSMUSG00000054604.8	novel	760	2	NA	NA	-320	-128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.5	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCGTACTCCTGTGCT	NA	False	NA	32	True	ATTAAA	-14	NA	64672744	64679742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672899_64672960_64673389_64675913
ES.13900.5	chr16	+	5627	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	-60	1145	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAGTATGAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	64672298	64681015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_64672600_64673161_64673389_64675916
ES.13900.7	chr16	+	3637	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-29	817	-29	-817	multi-exon	FALSE	canonical	3	981	junction_2	152	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGCTTATTTTTCAT	NA	False	NA	92	True	AGTAAA	-18	NA	64672329	64679053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13900.9	chr16	+	1556	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	-12	2881	-12	640	multi-exon	FALSE	canonical	3	981	junction_2	152	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTCCTTGTGGTCGCTT	NA	False	NA	NA	False	NA	NA	NA	64672346	64676989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_64672600_64673161_64673389_64675913
ES.13901.1	chr16	-	210	1	Intergenic	novelGene_11648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAATTAAGATTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	64684752	64684542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64684500_64684800
ES.13902.1	chr16	+	162	1	Intergenic	novelGene_11649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGATACAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	64691129	64691291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_64691100_64691300
ES.13903.1	chr16	+	207	1	Intergenic	novelGene_11650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATGAAGTTCTGAGAG	NA	False	NA	NA	False	NA	NA	NA	64696020	64696227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_64696000_64696200
ES.13904.1	chr16	+	175	1	Intergenic	novelGene_11651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATGGATTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	64698251	64698426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_64698300_64698400
ES.13905.1	chr16	-	244	1	Intergenic	novelGene_11652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAACTATTTTT	NA	False	NA	NA	False	NA	NA	NA	64706090	64705846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64705800_64706100
ES.13906.1	chr16	-	179	1	Intergenic	novelGene_11653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	64713052	64712873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64712900_64713100
ES.13907.1	chr16	-	158	1	Intergenic	novelGene_11654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	64717041	64716883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64716900_64717000
ES.13908.1	chr16	-	227	1	Intergenic	novelGene_11655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGTTTAGAAATAGAAGG	NA	False	NA	NA	False	AAAAAG	-23	NA	64727106	64726879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64726900_64727100
ES.13909.1	chr16	-	178	1	Intergenic	novelGene_11656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCGACTAATCA	NA	False	NA	NA	False	NA	NA	NA	64836857	64836679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64836700_64836900
ES.1391.1	chr1	+	3407	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	-34	2	multi-exon	TRUE	canonical	3	12	junction_1	47.209573199224	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134363331	134418613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_134363609_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.10	chr1	+	3477	13	NNC	ENSMUSG00000026455.15	novel	3277	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	67.3576688696659	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134383268	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134383404_134386165_134386405_134388585_134388764_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.11	chr1	+	6505	11	NIC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	104	junction_1	26.2068693284795	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134383268	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.12	chr1	+	3062	11	NNC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1069746795437	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134383268	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134383404_134391564_134391721_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.13	chr1	+	3411	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	0	-3	0	3	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGATTTATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134383268	134418759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.14	chr1	+	3447	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-22	-148	2	3	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGATTTATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134383270	134418759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.15	chr1	+	3079	11	NIC	ENSMUSG00000026455.15	novel	3277	12	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	58.6635321132303	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134383270	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386165_134386405_134391564_134391719_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.16	chr1	+	3527	1	NIC	ENSMUSG00000026455.15	novel	3118	3	NA	NA	8	-7505	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	134383276	134386803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383300_134386800
ES.1391.17	chr1	+	3426	13	NNC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	63.1288365170783	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134383278	134418606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134383404_134386203_134386405_134388585_134388764_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.18	chr1	+	3188	12	NNC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	48.9663402689934	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134383281	134418606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415438_134415481_134416672_134416860_134417069
ES.1391.19	chr1	+	3091	11	NIC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	54.0656082921482	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGAGAATTTGTGGGT	NA	False	NA	18	True	ATTAAA	-19	NA	134383291	134418612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.2	chr1	+	3386	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	18	-5	multi-exon	FALSE	canonical	1	1	junction_1	50.1417824484475	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134363383	134418606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_134363609_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.20	chr1	+	1166	3	ISM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	29	26333	5	-1885	5prime_fragment	FALSE	canonical	3	104	junction_1	13	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATACCTTTTTAAGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	134383297	134392423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134383404_134386203_134386405_134391564
ES.1391.21	chr1	+	4171	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	17	-911	17	766	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTGCATAGCTTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	134383309	134419522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.22	chr1	+	7061	7	NIC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	2251	-2	intron_retention	FALSE	canonical	3	138	junction_2	19.1398362932741	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134398867	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.23	chr1	+	1992	4	ISM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	31443	7	11718	-7	3prime_fragment	FALSE	canonical	3	174	junction_2	10.3708994574027	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGCTTTAAGAGAAT	6628	False	NA	10	True	ATTAAA	-11	NA	134414735	134418604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.24	chr1	+	2467	3	NIC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	11718	-7	intron_retention	FALSE	canonical	3	174	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGCTTTAAGAGAAT	6628	False	NA	10	True	ATTAAA	-11	NA	134414735	134418604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134415481_134416672_134416860_134417069
ES.1391.3	chr1	+	4278	13	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	3408	12	NA	NA	35	3	multi-exon	FALSE	canonical	0	0	junction_1	49.8154232029488	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGAATTTGTGGGTAG	NA	False	NA	20	True	ATTAAA	-21	NA	134363400	134418614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_134363609_134382464_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.4	chr1	+	121	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTGTATGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	134380626	134380747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134380600_134380700
ES.1391.5	chr1	+	3317	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	-38	-2	-14	2	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134383254	134418613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.6	chr1	+	3188	12	NNC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4097262030629	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTAAGAGAATTTGTG	NA	False	NA	15	True	ATTAAA	-16	NA	134383255	134418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134383404_134386289_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.7	chr1	+	6553	11	NIC	ENSMUSG00000026455.15	novel	3277	12	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	46	junction_1	40.1990049628097	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	False	NA	12	True	ATTAAA	-13	NA	134383255	134418606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.8	chr1	+	7798	11	NIC	ENSMUSG00000026455.15	novel	3408	12	NA	NA	-8	2	intron_retention	FALSE	canonical	3	104	junction_1	26.1908380927377	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGAGAATTTGTGGGTA	NA	False	NA	19	True	ATTAAA	-20	NA	134383260	134418613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ES.1391.9	chr1	+	3187	12	NIC	ENSMUSG00000026455.15	novel	3220	12	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	48.4638401455445	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTTTAAGAGAATTTGT	NA	False	NA	14	True	ATTAAA	-15	NA	134383260	134418608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416753_134416860_134417069
ES.13910.1	chr16	-	159	1	Intergenic	novelGene_11657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	64883169	64883010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_64883000_64883200
ES.13911.1	chr16	+	130	1	Intergenic	novelGene_11658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64906538	64906668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_64906500_64906700
ES.13912.1	chr16	+	1189	1	Antisense	novelGene_ENSMUSG00000004843.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCATGACTATGTAT	NA	False	NA	NA	False	AATAAA	-13	NA	65359211	65360400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_65359200_65360400
ES.13913.1	chr16	-	1895	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	-26	3	-26	-3	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCCTAACGCGCA	NA	False	NA	-11	True	AATAAA	-16	NA	65359638	65336016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ES.13913.2	chr16	-	1876	7	NNC	ENSMUSG00000004843.8	novel	1722	7	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	119.881422895941	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCCTAACGCGCA	NA	False	NA	-11	True	AATAAA	-16	NA	65359582	65336016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65350904_65350942_65359360
ES.13913.3	chr16	-	1725	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	32	115	32	-115	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCATTCTTCTAAAGGAA	NA	False	NA	-123	True	ATTAAA	-13	NA	65359580	65336128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ES.13913.4	chr16	-	1232	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	14	626	14	-626	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGCTTGTCCTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	65359598	65336639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ES.13914.1	chr16	-	1089	1	Intergenic	novelGene_11659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATACAGGAGAACACT	NA	False	NA	NA	False	NA	NA	NA	66321551	66320462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_66320500_66321600
ES.13915.1	chr16	+	176	1	Intergenic	novelGene_11660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAATATAGAAC	NA	False	NA	NA	False	NA	NA	NA	66532608	66532784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_66532600_66532800
ES.13916.1	chr16	-	1458	2	NNC	ENSMUSG00000064115.14	novel	422	2	NA	NA	1	-806542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCGACTTTTTATTA	NA	False	NA	NA	False	CATAAA	-12	NA	67417795	67416234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_67417139_67417241
ES.13917.1	chr16	+	4437	2	Intergenic	novelGene_11661	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	67427012	67433822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_67428098_67430470
ES.13918.1	chr16	+	158	1	Intergenic	novelGene_11662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAACAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	67940367	67940525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_67940400_67940500
ES.13919.1	chr16	-	4206	1	Intergenic	novelGene_11663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTCTGGTTTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	68423510	68419304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_68419300_68423500
ES.1392.1	chr1	-	367	2	Antisense	novelGene_ENSMUSG00000101061.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTATTGT	NA	False	NA	NA	False	NA	NA	NA	134376429	134356960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134357138_134376239
ES.1392.2	chr1	-	178	2	Antisense	novelGene_ENSMUSG00000101061.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	134376433	134356961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134356977_134376270
ES.1392.4	chr1	-	2225	1	Antisense	novelGene_ENSMUSG00000026457.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAAAAACACAAAAA	2213	False	NA	NA	False	NA	NA	NA	134359752	134357527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134357500_134359800
ES.1392.5	chr1	-	184	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGGATGGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	134369563	134369379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134369400_134369600
ES.1392.6	chr1	-	203	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATTAGACAACATTATA	NA	False	NA	NA	False	NA	NA	NA	134376432	134376229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134376200_134376400
ES.13920.2	chr16	+	2997	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	-17	-2	intron_retention	TRUE	non_canonical	1	3	junction_14	9.28415615743055	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGACTAATGTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70110819	70366600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
ES.13920.3	chr16	+	2253	16	Fusion	ENSMUSG00000116792.2_ENSMUSG00000022707.17	novel	2846	17	NA	NA	-5	-8212	multi-exon	FALSE	canonical	0	0	junction_15	10.4986771653491	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCACTGTGCATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	70111016	70413498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70413321
ES.13920.4	chr16	+	3841	16	NNC	ENSMUSG00000022707.17	novel	2846	17	NA	NA	-5	-24	intron_retention	FALSE	non_canonical	0	0	junction_5	11.3458754130692	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAAATGCCAA	NA	False	NA	NA	False	NA	NA	NA	70111016	70366578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70232752_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325900_70357912_70358030_70365876
ES.13921.1	chr16	-	3808	2	Intergenic	novelGene_11664	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAACCCATGCATCATTG	NA	False	NA	NA	False	AATAAA	-17	NA	70595089	70591156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_70594922_70595046
ES.13922.1	chr16	+	160	1	Intergenic	novelGene_11665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	71581867	71582027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_71581900_71582000
ES.13923.1	chr16	-	3958	2	Intergenic	novelGene_11666	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	71588812	71582504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_71585900_71588249
ES.13924.1	chr16	+	178	1	Intergenic	novelGene_11667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGAAAAATG	NA	False	NA	NA	False	NA	NA	NA	71947529	71947707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_71947500_71947700
ES.13925.1	chr16	-	173	1	Intergenic	novelGene_11668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATAGC	NA	False	NA	NA	False	NA	NA	NA	72047141	72046968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_72047000_72047100
ES.13926.1	chr16	-	178	1	Intergenic	novelGene_11669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAACCAAAACAGCA	NA	False	NA	NA	False	NA	NA	NA	72403812	72403634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_72403600_72403800
ES.13927.1	chr16	+	192	1	Intergenic	novelGene_11670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGTTATTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72457764	72457956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_72457800_72458000
ES.13928.1	chr16	+	7753	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-179	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.2815414865151	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTTGTGTTGATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72459857	72842986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.11	chr16	+	7362	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.5099239315189	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCCTTCCTTGTGTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	72460035	72842981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539334_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786676_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.12	chr16	+	7544	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.7919428676021	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72460036	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.13	chr16	+	7168	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	2	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.9410780633455	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGTATTCATTTAGC	NA	False	NA	NA	False	NA	NA	NA	72460038	72842774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.14	chr16	+	6453	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	2	-1116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.2815414865151	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTACTTTATTTTGTCT	NA	False	NA	NA	False	AATATA	-18	NA	72460038	72841867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.15	chr16	+	5319	19	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	4	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.8092324506803	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCAATTTAAAATCT	NA	False	NA	NA	False	AATAAA	-20	NA	72460040	72800392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806
ES.13928.16	chr16	+	7315	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	17.0352656083908	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72460063	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798963_72801500_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.17	chr16	+	3734	17	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.6682941466759	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTTGTTGCTCCACT	NA	False	NA	NA	False	ATTAAA	-28	NA	72460093	72786781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486
ES.13928.18	chr16	+	1868	2	FSM	ENSMUSG00000022883.12	ENSMUST00000231474.2	2277	2	415	-6	395	6	multi-exon	FALSE	canonical	3	34	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTCATTGTGTTTGGA	NA	False	NA	NA	False	ATTAAA	-19	NA	72460486	72540285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_72461083_72539013
ES.13928.19	chr16	+	4557	1	Intergenic	novelGene_11671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATTATCCATAAGT	NA	False	NA	NA	False	NA	NA	NA	72523279	72527836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_72523300_72527800
ES.13928.2	chr16	+	2358	1	Genic_Genomic	ENSMUSG00000022883.12	novel	NA	NA	NA	NA	-135	-77046	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGACCCACAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	72459901	72462259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_72459900_72462300
ES.13928.20	chr16	+	6528	28	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	78919	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.5336706722585	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72539010	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.21	chr16	+	5341	21	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	307017	7	-6183	-7	3prime_fragment	FALSE	canonical	3	19	junction_12	14.2755034937476	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCATCCTTCCTTG	1980	False	NA	NA	False	ATTAAA	-10	NA	72767053	72842976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.22	chr16	+	4483	13	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	44	18353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.7469394188158	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGCAATGTGGTCTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	72775661	72823987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821545_72821602
ES.13928.23	chr16	+	4375	15	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	316694	-4	1113	4	3prime_fragment	FALSE	canonical	3	19	junction_6	16.1750626911065	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTTGTGTTGATTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	72776730	72842987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.24	chr16	+	4340	6	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	348446	3	5174	-3	3prime_fragment	FALSE	canonical	3	44	junction_1	9.76933979345585	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCCTTCCTTGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	72808482	72842980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.25	chr16	+	3322	7	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	5181	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	22.5585657542515	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72808489	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72808749_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.26	chr16	+	2976	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17374	5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGTGTTGATTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	72820682	72842988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.27	chr16	+	2706	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17394	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.7930547181087	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCATCCTTCCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	72820702	72842976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832618_72839878_72840076_72841235
ES.13928.28	chr16	+	2566	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17495	-284	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	72820803	72842699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.29	chr16	+	2775	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17511	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.1986301048525	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCATCCTTCCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	72820819	72842976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840024_72841235
ES.13928.3	chr16	+	3389	9	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-29	6210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.2351361989317	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACAGAGGCTATATATA	NA	False	NA	NA	False	AATAAA	-14	NA	72460007	72761342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72760206
ES.13928.30	chr16	+	2839	5	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	360954	4	17682	-4	3prime_fragment	FALSE	canonical	3	62	junction_4	4.74341649025257	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCATCCTTCCTTGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	72820990	72842979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.31	chr16	+	2022	1	Intergenic	novelGene_11673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGTAATTTTCACCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	72834159	72836181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_72834200_72836200
ES.13928.4	chr16	+	7435	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.4296874596358	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTTGTGTTGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	72460009	72842985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.5	chr16	+	7194	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.1670173185901	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTTGTGTTGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	72460012	72842985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832618_72839878_72840076_72841235
ES.13928.6	chr16	+	7502	30	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.5999298022956	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72460018	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801376_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.7	chr16	+	7139	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-17	-284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.4296874596358	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	72460019	72842699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13928.8	chr16	+	7323	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.5581653423975	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72460019	72842983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832618_72839878_72840076_72841235
ES.13928.9	chr16	+	7396	28	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.9410780633455	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGATTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	72460028	72842992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756960_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72792004_72792048_72798806_72798962_72801462_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ES.13929.1	chr16	-	1135	1	Intergenic	novelGene_11672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	AAAAAG	-11	NA	72637497	72636362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_72636400_72637500
ES.1393.1	chr1	-	228	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATCTTTTTCTCTCTA	1526	False	NA	NA	False	AATATA	-10	NA	134404106	134403878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134403900_134404100
ES.13930.1	chr16	+	1492	3	Intergenic	novelGene_11674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAAGCTAGATTCT	NA	False	NA	NA	False	NA	NA	NA	73294182	73307210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_73294348_73305005_73305187_73306064
ES.13930.2	chr16	+	4844	4	Intergenic	novelGene_11675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73294226	73312690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_73294348_73305005_73305187_73306064_73306365_73308448
ES.13930.3	chr16	+	2620	3	Intergenic	novelGene_11676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAATTTCTTTACTA	NA	False	NA	NA	False	AATAAA	-18	NA	73294233	73308389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_73294348_73305005_73305187_73306064
ES.13931.1	chr16	-	188	1	Intergenic	novelGene_11677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	73300918	73300730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_73300700_73300900
ES.13932.1	chr16	-	2389	1	Intergenic	novelGene_11678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACAGTCTGACTTAAT	NA	False	NA	NA	False	AATAAA	-40	NA	73478612	73476223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_73476200_73478600
ES.13933.1	chr16	-	2303	1	Intergenic	novelGene_11679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	74571124	74568821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_74568800_74571100
ES.13934.1	chr16	-	4622	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	46	-431	7	431	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGCTGCTCAAGGGCT	4027	False	NA	NA	False	GATAAA	-24	NA	75563663	75551478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.2	chr16	-	4474	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	30	-267	0	267	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAGTTACAAGTCAAC	4011	False	NA	NA	False	AATAAA	-36	NA	75563679	75551642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.3	chr16	-	4065	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	4	168	4	-168	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTTCTATCTTAAGA	3985	False	NA	2	True	AATAAA	-25	NA	75563705	75552077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.4	chr16	-	4135	6	ISM	ENSMUSG00000032932.16	ENSMUST00000232633.2	1837	10	313	9759	0	-168	5prime_fragment	FALSE	canonical	1	1	junction_1	24.0914922742449	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTTCTATCTTAAGA	4011	False	NA	2	True	AATAAA	-25	NA	75563679	75552077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_75555337_75555519_75555616_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.5	chr16	-	3557	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	46	634	7	-634	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGCCTCTTAAAAATG	4027	False	NA	NA	False	NA	NA	NA	75563663	75552543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.6	chr16	-	2584	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	46	1607	7	11	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTATCTTGTTCTT	4027	False	NA	NA	False	AATGAA	-23	NA	75563663	75553516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.7	chr16	-	2243	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	4	1990	4	-372	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGCTATCCAAGACCA	3985	False	NA	NA	False	AATAAA	-22	NA	75563705	75553899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13934.8	chr16	-	4084	3	FSM	ENSMUSG00000032932.16	ENSMUST00000137806.2	2511	3	17	-1590	17	-958	multi-exon	FALSE	canonical	3	51	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAGCTCAGTA	4037	False	NA	NA	False	NA	NA	NA	75563653	75554485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75558198_75561831_75562173_75563622
ES.13934.9	chr16	-	1656	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	4	2577	4	-959	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAAAAAAAGCTCAGT	3985	False	NA	NA	False	NA	NA	NA	75563705	75554486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ES.13935.1	chr16	-	176	1	Intergenic	novelGene_11680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTTCAAATTA	NA	False	NA	NA	False	NA	NA	NA	75595648	75595472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_75595500_75595600
ES.13936.1	chr16	+	163	1	Intergenic	novelGene_11681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75614796	75614959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_75614800_75615000
ES.13937.1	chr16	-	196	1	Intergenic	novelGene_11682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGCTGTAACCATGACA	NA	False	NA	NA	False	NA	NA	NA	75739250	75739054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_75739100_75739200
ES.13938.1	chr16	+	177	1	Intergenic	novelGene_11683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGAAAGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	75816211	75816388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_75816200_75816400
ES.13939.1	chr16	+	5381	1	Antisense	novelGene_ENSMUSG00000048490.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAGGACTCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	76116325	76121706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_76116300_76121700
ES.1394.1	chr1	-	2701	2	Antisense	novelGene_ENSMUSG00000026455.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTCTCTTTATGTAGTT	NA	False	NA	NA	False	NA	NA	NA	134420288	134408897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134410197_134418886
ES.13940.1	chr16	-	8278	5	NNC	ENSMUSG00000048490.15	novel	4529	4	NA	NA	-45	290	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.3592730715023	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATACATGTGTGAGCAGT	NA	False	NA	NA	False	NA	NA	NA	76169982	76083997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_76084008_76084055_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.10	chr16	-	4398	2	NIC	ENSMUSG00000048490.15	novel	4529	4	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGATTGATGCAACTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	76170003	76087749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_76091904_76169759
ES.13940.11	chr16	-	4498	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	31	0	19	0	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGATTGATGCAACTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	76169906	76087749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.12	chr16	-	4085	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	16	-3561	9	-304	multi-exon	FALSE	canonical	2	16	junction_1	15.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGGGTCTTTTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	76169916	76088053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76149359_76149438_76169759
ES.13940.13	chr16	-	4211	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	13	305	1	-305	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTTGGGTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	76169924	76088054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.15	chr16	-	4100	4	NNC	ENSMUSG00000048490.15	novel	4529	4	NA	NA	-359	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.1058061754523	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAATAGCCATATGGGA	NA	False	NA	NA	False	ACTAAA	-26	NA	76170296	76088176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_76091904_76127633_76127753_76149359_76149438_76170120
ES.13940.16	chr16	-	4159	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-57	427	-57	-427	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAATAGCCATATGGGA	NA	False	NA	NA	False	ACTAAA	-26	NA	76169994	76088176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.2	chr16	-	8053	4	NIC	ENSMUSG00000048490.15	novel	7868	4	NA	NA	-47	18	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	8.73053390247253	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGCTCTTCTTTCATT	NA	False	NA	NA	False	AATAAA	-38	NA	76169984	76084269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_76091904_76127633_76127753_76149359_76149435_76169759
ES.13940.4	chr16	-	7714	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-48	-3137	-48	-325	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCTTTTTTGTGGGCT	NA	False	NA	3	True	AATAAA	-29	NA	76169985	76084612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.5	chr16	-	7579	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	-46	-6993	-41	-334	multi-exon	FALSE	canonical	2	16	junction_1	15.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAAATGGCTTCTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	76169978	76084621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76149359_76149438_76169759
ES.13940.7	chr16	-	7352	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	-36	-2787	-36	-675	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTAATTTTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	76169973	76084962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ES.13940.8	chr16	-	4592	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	-52	-4000	-47	135	multi-exon	FALSE	canonical	2	16	junction_1	15.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAAGCCTTGTGCTGAT	NA	False	NA	21	True	NA	NA	NA	76169984	76087614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76091904_76149359_76149438_76169759
ES.13941.1	chr16	-	506	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-60	-44	-60	44	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	-17	True	AATAAA	-15	NA	76200600	76200094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_76200100_76200600
ES.13942.1	chr16	+	4837	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	-54	-7	-54	7	multi-exon	TRUE	canonical	3	45	junction_20	12.0225056756949	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTATTGCTTCTTGTAGC	NA	False	NA	NA	False	AGTAAA	-19	NA	76810539	76913675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ES.13942.10	chr16	+	4721	24	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	14	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.8722625701443	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTTTGTTAGCATAGTA	NA	False	NA	NA	False	TATAAA	-15	NA	76810607	76913635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910628_76910745_76911771_76911968_76912277
ES.13942.11	chr16	+	4718	24	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.8722625701443	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGTCTATTGC	NA	False	NA	NA	False	AGTAAA	-9	NA	76810608	76913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910660_76910745_76911771_76911968_76912277
ES.13942.12	chr16	+	6031	18	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	15	3135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.7133436269705	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAATAAAACTTGTAAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	76810608	76893951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847287_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
ES.13942.14	chr16	+	4110	6	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	21	20754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.708186985597	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATTGAAATCATCGAG	NA	False	NA	NA	False	NA	NA	NA	76810614	76855231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834377_76845329_76845454_76847285_76847449_76852041
ES.13942.15	chr16	+	5003	25	NNC	ENSMUSG00000022867.12	novel	4986	26	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	21.2150038625707	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGTGTCTATTGCTT	NA	False	NA	NA	False	AGTAAA	-11	NA	76810616	76913667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76890813_76891065_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ES.13942.16	chr16	+	4353	24	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	79	-223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.8722625701443	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTCCTTTTTTTTTT	NA	False	NA	NA	False	AATGAA	-44	NA	76810753	76913445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910660_76910745_76911771_76911968_76912277
ES.13942.18	chr16	+	137	1	Intergenic	novelGene_11684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	76856380	76856517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_76856400_76856500
ES.13942.19	chr16	+	5111	12	NNC	ENSMUSG00000022867.12	novel	711	3	NA	NA	-21031	3146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0546897542569	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTGTCCTTATTCA	NA	False	NA	NA	False	AATAAA	-2	NA	76857358	76893962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76857581_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
ES.13942.2	chr16	+	3992	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	-17	801	-17	-801	multi-exon	FALSE	canonical	3	45	junction_20	12.0225056756949	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTGTAAGCAGGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	76810576	76912867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ES.13942.20	chr16	+	2192	7	ISM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	79895	-1	9701	1	3prime_fragment	FALSE	canonical	3	45	junction_3	5.11262055005932	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTATTGCTTCT	NA	False	NA	NA	False	AGTAAA	-13	NA	76890488	76913669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ES.13942.21	chr16	+	4226	3	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	97509	3	27315	-3	3prime_fragment	FALSE	canonical	3	57	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGTCTATTGC	NA	False	NA	NA	False	AGTAAA	-9	NA	76908102	76913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_76910745_76911771_76911968_76912277
ES.13942.3	chr16	+	2927	18	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	-6	22844	-6	8	5prime_fragment	FALSE	canonical	3	54	junction_8	11.7334879931088	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCAGACTACAGACTAAT	NA	False	NA	NA	False	AATAAA	-36	NA	76810587	76890824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
ES.13942.6	chr16	+	4592	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	4	180	4	-180	multi-exon	FALSE	canonical	3	45	junction_20	12.0225056756949	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTAAAAGACGTAGACTAT	NA	False	NA	NA	False	NA	NA	NA	76810597	76913488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ES.13942.7	chr16	+	2819	17	NNC	ENSMUSG00000022867.12	novel	4776	24	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.9108296615527	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCAGACTACAGA	NA	False	NA	NA	False	AATAAA	-31	NA	76810601	76890819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880638_76880838_76890490
ES.13942.8	chr16	+	4691	5	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	10	62464	10	16727	5prime_fragment	FALSE	canonical	3	63	junction_3	5.8309518948453	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76810603	76851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285
ES.13942.9	chr16	+	3972	18	ISM	ENSMUSG00000022867.12	ENSMUST00000239066.2	4986	26	14	21779	14	1073	5prime_fragment	FALSE	canonical	3	54	junction_8	11.7334879931088	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCACTGGTTTGTGTAC	NA	False	NA	NA	False	CATAAA	-13	NA	76810607	76891889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490
ES.13943.1	chr16	-	3180	3	Intergenic	novelGene_11685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTCTCTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	76917832	76914009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_76916635_76917229_76917698_76917745
ES.13944.1	chr16	+	5805	8	NIC	ENSMUSG00000022865.15	novel	1657	8	NA	NA	-157	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.3062749759323	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGGTGTGGCTTTATTT	NA	False	NA	21	True	AATAAA	-22	NA	78098219	78137649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_78098441_78098542_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13944.10	chr16	+	5300	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	254	188	-6	-188	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGACACCCACATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	78098637	78137460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13944.11	chr16	+	2529	1	ISM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	35763	973	8234	-973	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGCTATTCTTTAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	78134146	78136675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_78134100_78136700
ES.13944.2	chr16	+	5464	8	NNC	ENSMUSG00000022865.15	novel	1657	8	NA	NA	-55	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	27.3062749759323	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCCTGCCTTGCGGTGT	NA	False	NA	11	True	AATAAA	-12	NA	78098588	78137639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133451_78133514
ES.13944.3	chr16	+	4641	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	-47	-2937	-47	2937	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTAATGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	78098596	78159599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
ES.13944.4	chr16	+	4024	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	213	1505	-47	-1505	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACTCGTCTGTGTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	78098596	78136143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13944.5	chr16	+	4711	8	NNC	ENSMUSG00000022865.15	novel	1657	8	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.3062749759323	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGGTGTGGCTTTATT	NA	False	NA	20	True	AATAAA	-21	NA	78098601	78137648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78134072
ES.13944.6	chr16	+	3270	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	218	2254	-42	-2254	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCGCCTTCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	78098601	78135394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13944.7	chr16	+	4942	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	222	578	-38	-578	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTCGTTTGCCTACT	NA	False	NA	NA	False	AATAAA	-20	NA	78098605	78137070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13944.8	chr16	+	1693	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	-37	1	-37	-1	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATGAACATTTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	78098606	78156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
ES.13944.9	chr16	+	1517	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	229	3996	-31	518	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGGGGTTTCTTACC	NA	False	NA	NA	False	AATAAA	-31	NA	78098612	78133652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ES.13945.1	chr16	-	3250	7	NNC	ENSMUSG00000022863.16	novel	3013	4	NA	NA	34832	30905	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCGAAGGCACCTCT	NA	False	NA	NA	False	NA	NA	NA	78135392	78098619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78098762_78122043_78122211_78125840_78126046_78130248_78130404_78131054_78131180_78131709_78131846_78133072
ES.13945.10	chr16	-	1159	4	NIC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	40	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	370.74369703191	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAATGTGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	78173658	78156754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78157427_78166000_78166139_78170132_78170312_78173488
ES.13945.11	chr16	-	1289	5	NNC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	614	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	349.459135665388	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAATGTGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	78173084	78156754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78172992
ES.13945.12	chr16	-	5748	3	NNC	ENSMUSG00000022863.16	novel	442	4	NA	NA	3557	-8	intron_retention	FALSE	canonical	0	0	junction_2	396.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACAATGTGTGGTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	78166667	78156755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78161898_78166000_78166282_78166342
ES.13945.13	chr16	-	1333	5	NNC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	360	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	349.459135665388	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGACAATGTGTGGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	78173338	78156756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173200
ES.13945.14	chr16	-	1176	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	24	214	24	-214	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGACTTGAGTATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	78173674	78156961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.2	chr16	-	157	1	Intergenic	novelGene_11686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAATAATATA	NA	False	NA	NA	False	NA	NA	NA	78115507	78115350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_78115400_78115500
ES.13945.3	chr16	-	3227	5	NIC	ENSMUSG00000022863.16	novel	3013	4	NA	NA	78	-5	intron_retention	FALSE	canonical	0	0	junction_1	344.025435106185	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGGTTCAACAGATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	78173620	78129529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78132100_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.4	chr16	-	3627	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	6	-2219	6	2219	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTATTGGCTCTTTATG	NA	False	NA	NA	False	AGTAAA	-40	NA	78173692	78154528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.5	chr16	-	1518	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	112	-216	112	216	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAGTCAGTATATATG	NA	False	NA	NA	False	AATAAA	-17	NA	78173586	78156531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.6	chr16	-	1428	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	-16	2	-16	-2	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGGTTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	78173714	78156749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.7	chr16	-	1499	6	NNC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	352.803968231651	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAATGTGTGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	78173672	78156753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78157427_78161689_78161898_78166000_78166139_78168513_78168631_78170132_78170312_78173488
ES.13945.8	chr16	-	3989	5	NNC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	344.025435106185	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAATGTGTGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	78173690	78156753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78159308_78160981_78161898_78166000_78166139_78170132_78170312_78173488
ES.13945.9	chr16	-	5262	5	NNC	ENSMUSG00000022863.16	novel	1414	5	NA	NA	78	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	316.815798217197	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAATGTGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	78173620	78156754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78157427_78161689_78161898_78166000_78166282_78166342_78170312_78173488
ES.13946.1	chr16	-	6290	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-160	-3	-109	3	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCTCGGTTGATTTTC	3083	False	NA	0	True	AATAAA	-23	NA	78373705	78337222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.10	chr16	-	4956	5	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	3	-853	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGGTGTGGGGTACA	3269	False	NA	NA	False	AATAAA	-19	NA	78373519	78338078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
ES.13946.11	chr16	-	5022	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	17	-3768	-6	-855	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTGGTGTGGGGTA	3260	False	NA	NA	False	AATAAA	-17	NA	78373528	78338080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.12	chr16	-	5241	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-170	-3495	-119	-856	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTGTGGTGTGGGGT	3073	False	NA	NA	False	AATAAA	-16	NA	78373715	78338081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.13	chr16	-	5312	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-41	856	10	-856	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTGTGGTGTGGGGT	3202	False	NA	NA	False	AATAAA	-16	NA	78373586	78338081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.14	chr16	-	5114	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	1	1012	1	-1012	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTGTTAAGCTATGAC	3244	False	NA	NA	False	TATAAA	-12	NA	78373544	78338237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.15	chr16	-	4001	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	3	2123	3	1082	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTACGTAGAAGCCCGA	3246	False	NA	NA	False	NA	NA	NA	78373542	78339348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.16	chr16	-	3118	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-183	3192	-132	13	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTTTTCAGTTTCTCT	3060	False	NA	NA	False	NA	NA	NA	78373728	78340417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.17	chr16	-	2704	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-23	-1410	-23	-8	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	3220	False	NA	NA	False	AAGAAA	-38	NA	78373568	78340438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.18	chr16	-	2711	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	3	-1138	3	-8	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	3246	False	NA	NA	False	AAGAAA	-38	NA	78373542	78340438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.19	chr16	-	2425	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-136	-713	-85	-433	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGTTTCATATTCTTA	3107	False	NA	NA	False	AATAAA	-17	NA	78373681	78340863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.2	chr16	-	6073	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-224	-3205	-163	0	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGCCTCGGTTGATT	3029	False	NA	-3	True	AATAAA	-20	NA	78373759	78337225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
ES.13946.20	chr16	-	2370	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-115	-984	-64	-434	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGGTTTCATATTCTT	3128	False	NA	NA	False	AATAAA	-16	NA	78373660	78340864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.21	chr16	-	2397	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-55	3785	-4	566	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAATAACAAAC	3188	False	NA	64	True	NA	NA	NA	78373600	78341010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.22	chr16	-	2216	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-171	-774	-120	502	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGTTCCCGTAATCT	3072	False	NA	0	True	AATAAA	-21	NA	78373716	78341074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.23	chr16	-	2100	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-22	-502	-22	502	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGTTCCCGTAATCT	3221	False	NA	0	True	AATAAA	-21	NA	78373567	78341074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.24	chr16	-	1809	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-31	4349	20	2	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTATTTTGGGTATTT	3212	False	NA	NA	False	TATAAA	-14	NA	78373576	78341574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.25	chr16	-	1507	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-7	1144	3	2	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTATTTTGGGTATTT	3246	False	NA	NA	False	TATAAA	-14	NA	78373542	78341574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
ES.13946.26	chr16	-	1573	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	3	0	3	0	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTATTTTGGGTAT	3246	False	NA	NA	False	TATAAA	-12	NA	78373542	78341576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.27	chr16	-	1537	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	3	-269	3	-3	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAATTGCTATTTTGGG	3246	False	NA	NA	False	TATAAA	-9	NA	78373542	78341579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.28	chr16	-	1320	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	3	253	3	13	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGCTTCATCGGGGGAC	3246	False	NA	15	True	AATAAA	-32	NA	78373542	78341829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13946.29	chr16	-	1450	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114220.9	2644	5	-224	1418	-163	0	multi-exon	FALSE	canonical	3	46	junction_4	113.984648089118	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3029	False	NA	-4	True	AATAAA	-13	NA	78373759	78341848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373346
ES.13946.3	chr16	-	5903	5	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGCCTCGGTTGATT	3175	False	NA	-3	True	AATAAA	-20	NA	78373613	78337225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
ES.13946.30	chr16	-	1664	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	-160	4623	-109	0	multi-exon	FALSE	canonical	3	120	junction_4	82.0381009043969	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3083	False	NA	-4	True	AATAAA	-13	NA	78373705	78341848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ES.13946.31	chr16	-	1230	5	NIC	ENSMUSG00000022864.15	novel	1271	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	108.368295640376	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3225	False	NA	-4	True	AATAAA	-13	NA	78373563	78341848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373370
ES.13946.33	chr16	-	1580	5	NNC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	-132	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	130.840312977308	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3060	False	NA	-5	True	AATAAA	-12	NA	78373728	78341849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373184
ES.13946.34	chr16	-	1303	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-33	1	18	-1	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3210	False	NA	-5	True	AATAAA	-12	NA	78373578	78341849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.35	chr16	-	2546	4	NIC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	15	-1	intron_retention	FALSE	canonical	3	120	junction_3	86.3288287113098	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGGGTTACTCAATC	3207	False	NA	-5	True	AATAAA	-12	NA	78373581	78341849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78342173_78343393_78344980_78372808_78372943_78373078
ES.13946.5	chr16	-	6019	5	NNC	ENSMUSG00000022864.15	novel	6127	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	130.840312977308	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGAGCCTCGGTTGAT	3244	False	NA	-4	True	AATAAA	-19	NA	78373544	78337226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373184
ES.13946.6	chr16	-	8172	3	NIC	ENSMUSG00000022864.15	novel	1576	5	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	32	junction_2	137.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGAGCCTCGGTTGAT	3225	False	NA	-4	True	AATAAA	-19	NA	78373563	78337226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_78344980_78372808_78372943_78373278
ES.13946.7	chr16	-	6106	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	-214	-4621	-163	-2	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3029	False	NA	-5	True	AATAAA	-18	NA	78373759	78337227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ES.13946.8	chr16	-	5944	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	-19	-4349	-19	-2	multi-exon	FALSE	canonical	3	32	junction_4	120.034370077907	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGCCTCGGTTGA	3224	False	NA	-5	True	AATAAA	-18	NA	78373564	78337227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ES.13947.1	chr16	-	177	1	Intergenic	novelGene_11687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATAGTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	81211669	81211492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_81211500_81211700
ES.13948.1	chr16	+	2853	1	Intergenic	novelGene_11688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	81546993	81549846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_81547000_81549800
ES.13949.1	chr16	-	4205	1	Intergenic	novelGene_11689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_82004600_82008800
ES.13949.2	chr16	-	3820	2	Intergenic	novelGene_11690	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_82008145_82008527
ES.13949.3	chr16	-	4159	2	Intergenic	novelGene_11691	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	82008776	82004573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_82008405_82008448
ES.13949.4	chr16	-	2608	2	Intergenic	novelGene_11692	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	82008776	82004575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_82006997_82008589
ES.1395.1	chr1	+	2055	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-76	882	-76	-882	multi-exon	FALSE	canonical	3	479	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTCTGGGTGTTCT	6562	False	NA	NA	False	ATTAAA	-8	NA	134422309	134435630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134422548_134433813
ES.1395.10	chr1	+	1703	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	10	-893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	239.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCTTGTCATCTGTTTT	6648	False	NA	NA	False	NA	NA	NA	134422395	134435619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134422548_134433813_134434330_134434584
ES.1395.11	chr1	+	653	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	19	2189	19	-2189	multi-exon	FALSE	canonical	3	479	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTAGCCTGGTCCCT	6657	False	NA	NA	False	NA	NA	NA	134422404	134434323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134422548_134433813
ES.1395.12	chr1	+	6762	1	FSM	ENSMUSG00000077202.3	ENSMUST00000104014.3	126	1	-4217	-2419	-4217	2419	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCATCTGTTTTC	723	False	NA	NA	False	NA	NA	NA	134428858	134435620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134428900_134435600
ES.1395.13	chr1	+	1292	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	6496	1100	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	746	False	NA	NA	False	NA	NA	NA	134428881	134437612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134428960_134433813_134434585_134437169
ES.1395.14	chr1	+	3924	2	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	11131	1129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAACTCATAAAGTTT	1313	False	NA	NA	False	NA	NA	NA	134433516	134437641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134436505_134436705
ES.1395.2	chr1	+	2926	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-65	0	-65	0	multi-exon	FALSE	canonical	3	479	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGCGAGATGGCTCA	6573	False	NA	NA	False	ATTAAA	-13	NA	134422320	134436512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134422548_134433813
ES.1395.3	chr1	+	3803	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	-14	1129	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	239.5	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAACTCATAAAGTTT	6624	False	NA	NA	False	NA	NA	NA	134422371	134437641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134422548_134433813_134436505_134436705
ES.1395.4	chr1	+	1076	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	-12	1797	-12	-1797	multi-exon	FALSE	canonical	3	479	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAGAAACACATTACTTT	6626	False	NA	NA	False	AGTAAA	-29	NA	134422373	134434715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134422548_134433813
ES.1395.5	chr1	+	1972	2	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	-12	-892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCATCTGTTTTC	6626	False	NA	NA	False	NA	NA	NA	134422373	134435620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134422548_134433822
ES.1395.6	chr1	+	2069	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	-3	-892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCATCTGTTTTC	6635	False	NA	NA	False	NA	NA	NA	134422382	134435620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134422548_134426651_134426749_134433813
ES.1395.8	chr1	+	1998	1	Genic_Genomic	ENSMUSG00000042229.10	novel	NA	NA	NA	NA	-1	-12130	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTTTATAGTTACAGTT	6637	False	NA	NA	False	NA	NA	NA	134422384	134424382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_134422400_134424400
ES.1395.9	chr1	+	2111	3	NNC	ENSMUSG00000042229.10	novel	2861	2	NA	NA	8	-892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCATCTGTTTTC	6646	False	NA	NA	False	NA	NA	NA	134422393	134435620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134422548_134433100_134433251_134433813
ES.13950.1	chr16	-	176	1	Intergenic	novelGene_11693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTGCAAAGCTTCTA	NA	False	NA	NA	False	NA	NA	NA	82113427	82113251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_82113300_82113400
ES.13951.1	chr16	+	161	1	Intergenic	novelGene_11694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	84516670	84516831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84516700_84516800
ES.13952.1	chr16	+	2207	1	Antisense	novelGene_ENSMUSG00000022889.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	84522039	84524246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_84522000_84524200
ES.13953.1	chr16	+	198	1	Intergenic	novelGene_11695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84526599	84526797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84526600_84526800
ES.13954.1	chr16	-	7287	12	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-2	4230	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	479.364420805179	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAAGTTTCTGGTTTCAG	NA	False	NA	NA	False	GATAAA	-13	NA	84532120	84510233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84512280_84512516_84515981_84516631_84517206_84518758_84519035_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.10	chr16	-	2625	10	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-14	-707	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	316.524880538639	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532132	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84516809_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.11	chr16	-	1256	11	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-1093	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	396.775805714008	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84533723	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532278_84532478_84533664
ES.13954.12	chr16	-	1444	11	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-60	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	307.88635890536	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532690	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041_84532349_84532551
ES.13954.13	chr16	-	1010	9	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-3	-707	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	341.643454496058	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532121	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.15	chr16	-	1973	11	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-20	-707	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.35382145932	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532138	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84515981_84516638_84516809_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.17	chr16	-	1795	10	NNC	ENSMUSG00000022889.8	novel	523	2	NA	NA	-15	-1538	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	316.524880538639	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84532133	84516001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84516809_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.18	chr16	-	1048	9	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	509	2622	-3	-2622	5prime_fragment	FALSE	canonical	3	893	junction_3	64.3525446272329	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACCAAAAATAAAA	NA	False	NA	NA	False	AAGAAA	-36	NA	84532121	84517085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.2	chr16	-	1793	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	499	2	-13	-2	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCACTAGGCCCGGCTC	NA	False	NA	NA	False	AATAAA	-42	NA	84532131	84514465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13954.3	chr16	-	4561	8	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-3	-563	intron_retention	FALSE	canonical	3	703	junction_1	121.113709431447	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTTTGCAGATG	NA	False	NA	NA	False	AGTAAA	-13	NA	84532121	84515026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84531502_84532041
ES.13954.5	chr16	-	4918	8	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	10	-705	intron_retention	FALSE	canonical	3	703	junction_1	121.113709431447	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532620	84515168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84531502_84532041
ES.13954.6	chr16	-	3005	9	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-3	-705	intron_retention	FALSE	canonical	3	703	junction_1	114.12267248448	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532121	84515168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84531502_84532041
ES.13954.7	chr16	-	3749	9	NNC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-22	-705	intron_retention	FALSE	non_canonical	0	0	junction_1	440.680563872518	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTGTCCCTGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	84532140	84515168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84515981_84516630_84517206_84520725_84520880_84522012_84522079_84524371_84524482_84527302_84527375_84527715_84529370_84531294_84531502_84532041
ES.13954.8	chr16	-	2493	9	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-4	-707	intron_retention	FALSE	canonical	3	703	junction_1	116.934744088316	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532122	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84529370_84531294_84531502_84532041
ES.13954.9	chr16	-	3953	9	NIC	ENSMUSG00000022889.8	novel	2294	10	NA	NA	-56	-707	intron_retention	FALSE	canonical	3	703	junction_1	116.980767650071	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532174	84515170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ES.13955.1	chr16	-	358	1	Intergenic	novelGene_11696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84566053	84565695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84565700_84566100
ES.13955.2	chr16	-	219	1	Intergenic	novelGene_11697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	84566055	84565836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84565800_84566100
ES.13956.1	chr16	+	3921	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-440	-896	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	1361.98577452189	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTTAGTCTCATTCAC	NA	False	NA	22	True	ATTAAA	-33	NA	84570570	84621920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.105	chr16	+	4087	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGGTCTATGAATT	NA	False	NA	18	True	AATAAA	-21	NA	84571291	84622817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ES.13956.106	chr16	+	1988	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	18	790	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAACGCAACCTGGGATG	NA	False	NA	NA	False	NA	NA	NA	84571291	84620708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.107	chr16	+	7482	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	1453.68894575848	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTAAAGTGAAATGTCT	NA	False	NA	23	True	ACTAAA	-23	NA	84571292	84619909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691
ES.13956.11	chr16	+	4933	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-102	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGCTTTTTTACTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	84570908	84623270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.110	chr16	+	1054	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	33	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGCAAAGTGATGAAG	NA	False	NA	-4	True	ATTAAA	-23	NA	84571306	84619780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618128_84618191_84619674
ES.13956.111	chr16	+	1464	2	NNC	ENSMUSG00000053062.17	novel	1998	4	NA	NA	37	-23175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTGATTAGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	84571310	84584709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84583376
ES.13956.115	chr16	+	1044	9	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	790	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1740.93354536438	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84572063	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84572206_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.116	chr16	+	3099	2	Intergenic	novelGene_11698	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACCATGACACGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	84573565	84577924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84573681_84574940
ES.13956.117	chr16	+	4093	9	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	1319	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1738.59330710204	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGGTCTATGAATT	6286	False	NA	18	True	AATAAA	-21	NA	84591764	84622817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84591911_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.118	chr16	+	176	1	Intergenic	novelGene_11700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACACAA	9072	False	NA	NA	False	NA	NA	NA	84594550	84594726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84594600_84594700
ES.13956.119	chr16	+	1020	1	Intergenic	novelGene_11701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84596825	84597845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84596800_84597800
ES.13956.120	chr16	+	8790	7	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-7820	-2	intron_retention	FALSE	canonical	3	3297	junction_6	355.442642661544	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84598474	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
ES.13956.121	chr16	+	11675	5	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-2516	3	intron_retention	FALSE	canonical	3	3297	junction_4	480.295937417755	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGGTCTATGAATTAT	NA	False	NA	20	True	AATAAA	-23	NA	84603778	84622819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84603831_84606231_84612157_84613153_84615664_84618147_84618191_84619674
ES.13956.122	chr16	+	3747	6	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	-66	-2	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	1550.5812329575	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	663	False	NA	15	True	AATAAA	-18	NA	84606228	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.123	chr16	+	9386	4	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	988	14	intron_retention	FALSE	non_canonical	0	0	junction_3	1941.86891650515	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTGATGAAGAAATATGA	786	False	NA	4	True	ATTAAA	-31	NA	84607282	84619788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84609987_84612056_84612157_84613153_84613639_84613691
ES.13956.124	chr16	+	3486	5	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	2654	-968	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1699.43122838201	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTCCTTCACTCTACA	2452	False	NA	3	True	AATACA	-10	NA	84608948	84621848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.125	chr16	+	7654	3	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	3341	-4	intron_retention	FALSE	canonical	3	3297	junction_2	522.5	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTCTTACACTTGCAA	3139	False	NA	11	True	ATTAAA	-13	NA	84609635	84619770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84612157_84613153_84618191_84619674
ES.13956.126	chr16	+	7279	3	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	3856	-8	intron_retention	FALSE	canonical	3	3297	junction_2	522.5	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAGTGAAATGTCTG	3654	False	NA	24	True	ACTAAA	-24	NA	84610150	84619910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84612157_84613153_84618191_84619674
ES.13956.127	chr16	+	10096	3	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	4397	452	intron_retention	FALSE	canonical	3	3297	junction_2	522.5	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTATGCTTTTTTACTT	4195	False	NA	NA	False	AATAAA	-15	NA	84610691	84623268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84612157_84613153_84618191_84619674
ES.13956.128	chr16	+	1227	4	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	5034	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1850.38128203051	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTCTGACCTAAAG	4832	False	NA	13	True	ACTAAA	-13	NA	84611328	84619899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.129	chr16	+	10455	2	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	6017	3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGGTCTATGAATTAT	5815	False	NA	20	True	AATAAA	-23	NA	84612311	84622819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84613639_84613691
ES.13956.13	chr16	+	3471	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-60	6	intron_retention	FALSE	non_canonical	0	0	junction_6	1449.06065280588	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGCAAAGTGATGAAG	NA	False	NA	-4	True	ATTAAA	-23	NA	84570950	84619780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.130	chr16	+	9654	1	FSM	ENSMUSG00002076438.1	ENSMUST00020181720.1	98	1	-1821	-7735	-1821	7735	mono-exon	FALSE	NA	NA	NA	NA	NA	1580	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGGTCTATGAATT	6667	False	NA	18	True	AATAAA	-21	NA	84613163	84622817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84613200_84622800
ES.13956.131	chr16	+	4429	2	NIC	ENSMUSG00000053062.17	novel	659	7	NA	NA	8497	786	intron_retention	FALSE	canonical	3	3297	junction_1	0	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACATAAACGCAACCTGG	8295	False	NA	NA	False	NA	NA	NA	84614791	84620704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84618191_84619674
ES.13956.132	chr16	+	4075	2	NNC	ENSMUSG00000053062.17	novel	659	7	NA	NA	8759	44	intron_retention	FALSE	canonical	2	10	junction_1	0	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGAAGTTTTATGATC	8557	False	NA	34	True	AAGAAA	-16	NA	84615053	84619818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84617458_84618147
ES.13956.14	chr16	+	3361	2	NNC	ENSMUSG00000053062.17	novel	1998	4	NA	NA	-57	-30071	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAATGCCTTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	84570953	84577813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84574940
ES.13956.15	chr16	+	3171	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	1283.26796370309	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84570959	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84617458_84618147_84618191_84619674
ES.13956.16	chr16	+	2514	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1770.63678075855	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAATGTCTGGTAAT	NA	False	NA	29	True	ACTAAA	-29	NA	84570967	84619915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84610982_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.17	chr16	+	6248	8	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-43	7	intron_retention	FALSE	canonical	3	3297	junction_7	344.765107851471	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGCAAAGTGATGAAGA	NA	False	NA	-3	True	ATTAAA	-24	NA	84570967	84619781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
ES.13956.18	chr16	+	1524	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGGTAATATTCTG	NA	False	NA	-33	True	ACTAAA	-35	NA	84570968	84619921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.2	chr16	+	4737	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-355	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTCTATGAATTATTA	NA	False	NA	22	True	AATAAA	-25	NA	84570655	84622821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.20	chr16	+	3249	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-31	-1159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAGTGTCTAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	84570979	84621657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.21	chr16	+	4201	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-21	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1858.65795340485	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGGTCTATGAATTAT	NA	False	NA	20	True	AATAAA	-23	NA	84570989	84622819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.22	chr16	+	1125	5	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-17	-1009	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_4	1827.07982515817	1510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTGTGGTCATATCC	NA	False	NA	12	True	ATTAAA	-6	NA	84570993	84606875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84606528
ES.13956.23	chr16	+	1589	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1688.95111727463	1683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGAAATGTCTGGTA	NA	False	NA	27	True	ACTAAA	-27	NA	84570995	84619913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613266_84617338_84617458_84618147_84618191_84619674
ES.13956.24	chr16	+	3674	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1284.5748203728	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84570995	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691_84615664_84618147_84618191_84619674
ES.13956.26	chr16	+	4332	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1690.99425059802	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571009	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674_84622726_84622769
ES.13956.27	chr16	+	7634	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-1	4	intron_retention	FALSE	non_canonical	0	0	junction_7	1453.68894575848	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACACTTGCAAAGTGATGA	NA	False	NA	-6	True	ATTAAA	-21	NA	84571009	84619778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691
ES.13956.28	chr16	+	6466	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	126	intron_retention	TRUE	canonical	3	75	junction_2	1403.74456947357	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATGGCTTATGTGTTC	NA	False	NA	30	True	AATATA	-21	NA	84571010	84620044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603724_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
ES.13956.29	chr16	+	4488	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1690.99425059802	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571011	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84616227_84616342_84618147_84618191_84619674
ES.13956.3	chr16	+	2005	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-293	233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCTCTATATCCCAG	NA	False	NA	25	True	NA	NA	NA	84570717	84620151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.30	chr16	+	4221	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1826.5086467725	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571011	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.31	chr16	+	1134	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1858.65795340485	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571011	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.35	chr16	+	3423	2	NNC	ENSMUSG00000053062.17	novel	1998	4	NA	NA	1	-29951	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACGTTCTGTGGTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	84571011	84577933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84574940
ES.13956.36	chr16	+	2812	2	NNC	ENSMUSG00000053062.17	novel	1998	4	NA	NA	1	-30562	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTATCAATAAGCATT	NA	False	NA	NA	False	NA	NA	NA	84571011	84577322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84574940
ES.13956.37	chr16	+	3441	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	-912	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTATGCACAGCTCAACG	NA	False	NA	6	True	ATTAAA	-17	NA	84571011	84621904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.38	chr16	+	6294	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	1	6	intron_retention	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTAATATTCTGAGT	NA	False	NA	-30	True	ACTAAA	-38	NA	84571011	84619924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691_84618191_84619674
ES.13956.42	chr16	+	3693	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19	-2	intron_retention	FALSE	canonical	3	3297	junction_8	380.775503906173	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571029	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84615664_84618147_84618191_84619674
ES.13956.43	chr16	+	3518	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	19	-8	intron_retention	FALSE	non_canonical	0	0	junction_6	1812.42031211171	1683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAGTGAAATGTCTG	NA	False	NA	24	True	ACTAAA	-24	NA	84571029	84619910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84612153_84613153_84613285_84618147_84618191_84619674
ES.13956.44	chr16	+	904	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-244	1338	19	-1338	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTTTGTACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	84571029	84606546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13956.46	chr16	+	4402	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	1683.02604455982	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571069	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84617348_84617458_84618147_84618191_84619674
ES.13956.47	chr16	+	1373	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1688.95111727463	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571070	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613266_84617338_84617458_84618147_84618191_84619674
ES.13956.48	chr16	+	3266	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-190	-1078	73	1078	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCACTTTACAGCTCCAA	NA	False	NA	NA	False	NA	NA	NA	84571083	84608962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13956.49	chr16	+	4640	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-121	428	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84571152	84623244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.5	chr16	+	8254	7	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-258	174	intron_retention	FALSE	canonical	3	22	junction_6	1520.66583552513	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCACAAAATTCCTACCAG	NA	False	NA	-3	True	NA	NA	NA	84570752	84620092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612153_84613153
ES.13956.51	chr16	+	1177	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571158	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ES.13956.52	chr16	+	1175	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-115	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1826.5086467725	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAATGTCTGGTAAT	NA	False	NA	29	True	ACTAAA	-29	NA	84571158	84619915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.53	chr16	+	4349	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-115	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	1283.36787832293	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGGTCTATGAATT	NA	False	NA	18	True	AATAAA	-21	NA	84571158	84622817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615521_84615664_84618147_84618191_84619674
ES.13956.54	chr16	+	3325	3	NNC	ENSMUSG00000053062.17	novel	1998	4	NA	NA	-108	-29960	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACCATGACACGTTC	NA	False	NA	NA	False	AATAAA	-9	NA	84571165	84577924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84573615_84573681_84574940
ES.13956.55	chr16	+	1320	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAAGTGAAATGTCTGG	NA	False	NA	25	True	ACTAAA	-25	NA	84571165	84619911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618134_84618191_84619674
ES.13956.57	chr16	+	5767	8	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	-6	intron_retention	FALSE	canonical	3	3297	junction_7	406.036039417836	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAGTGAAATGTCTGGT	NA	False	NA	26	True	ACTAAA	-26	NA	84571165	84619912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84612157_84613153_84615664_84618147_84618191_84619674
ES.13956.58	chr16	+	6180	8	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-108	-7	intron_retention	FALSE	canonical	3	3297	junction_7	344.765107851471	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAAGTGAAATGTCTGG	NA	False	NA	25	True	ACTAAA	-25	NA	84571165	84619911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
ES.13956.59	chr16	+	3996	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1690.99425059802	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGGTCTATGAATTAT	NA	False	NA	20	True	AATAAA	-23	NA	84571166	84622819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674_84620923_84621150
ES.13956.6	chr16	+	1646	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-521	873	-258	-873	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCATGCATGTATACT	NA	False	NA	148	True	NA	NA	NA	84570752	84607011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13956.60	chr16	+	1427	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	127	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGCTTATGTGTTCA	NA	False	NA	31	True	AATATA	-22	NA	84571166	84620045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.64	chr16	+	1303	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	3	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGGTAATATTCTG	NA	False	NA	-33	True	ACTAAA	-35	NA	84571166	84619921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.65	chr16	+	1071	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1795.18696655751	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.66	chr16	+	1440	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGCTTATGTGTTCA	NA	False	NA	31	True	AATATA	-22	NA	84571166	84620045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ES.13956.67	chr16	+	1333	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	-19	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	1940.44691937543	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTCTGACCTAAAG	NA	False	NA	13	True	ACTAAA	-13	NA	84571166	84619899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619200_84619253_84619674
ES.13956.68	chr16	+	1193	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTGATGAAGAAATATGA	NA	False	NA	4	True	ATTAAA	-31	NA	84571166	84619788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.69	chr16	+	4768	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	428	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	1283.36787832293	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84571166	84623244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615521_84615664_84618147_84618191_84619674
ES.13956.70	chr16	+	3831	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	129	intron_retention	FALSE	canonical	3	3297	junction_8	380.775503906173	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCTTATGTGTTCAGG	NA	False	NA	33	True	AATATA	-24	NA	84571166	84620047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84615664_84618147_84618191_84619674
ES.13956.71	chr16	+	3769	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	-452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACCCACTTTTTGTT	NA	False	NA	NA	False	AAAAAG	-32	NA	84571166	84622364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.72	chr16	+	8106	7	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	-2	intron_retention	FALSE	canonical	3	22	junction_5	1507.02559330918	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTACACTTGCAAAG	NA	False	NA	-12	True	ATTAAA	-15	NA	84571166	84619772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84612153_84613153_84618191_84619674
ES.13956.73	chr16	+	9035	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	4	intron_retention	FALSE	non_canonical	0	0	junction_7	1361.98577452189	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTATGAATTATT	NA	False	NA	21	True	AATAAA	-24	NA	84571166	84622820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691_84618191_84619674
ES.13956.75	chr16	+	7667	7	ISM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	156	2901	-107	-3	intron_retention	FALSE	canonical	3	3817	junction_4	205.583519118954	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAAATGTCTGGTAAT	NA	False	NA	29	True	ACTAAA	-29	NA	84571166	84619915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153
ES.13956.77	chr16	+	1265	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	1683.02604455982	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84617348_84617458_84618147_84618191_84619674
ES.13956.78	chr16	+	1110	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1795.42933299975	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.79	chr16	+	5220	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1770.63678075855	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTATGAATTATT	NA	False	NA	21	True	AATAAA	-24	NA	84571166	84622820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84610982_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.8	chr16	+	2548	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	-521	-29	-258	29	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGACTAGTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	84570752	84607913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13956.80	chr16	+	3282	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	-894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1690.99425059802	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTAGTCTCATTCACCG	NA	False	NA	24	True	ATTAAA	-35	NA	84571166	84621922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674_84620666_84620710
ES.13956.81	chr16	+	5167	11	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1958.30408517166	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATGGTCTATGAAT	NA	False	NA	17	True	AATAAA	-20	NA	84571166	84622816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84573615_84573681_84574940_84575822_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.82	chr16	+	3881	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1795.65168660067	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATGGTCTATGAAT	NA	False	NA	17	True	AATAAA	-20	NA	84571166	84622816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571242_84603793_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.83	chr16	+	3929	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	129	intron_retention	FALSE	canonical	3	3263	junction_7	404.473249269961	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCTTATGTGTTCAGG	NA	False	NA	33	True	AATATA	-24	NA	84571166	84620047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84618191_84619674
ES.13956.84	chr16	+	5984	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-106	0	intron_retention	FALSE	non_canonical	0	0	junction_7	1728.56161301818	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571167	84619774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612153_84613153_84613639_84613691_84618191_84619674
ES.13956.85	chr16	+	3041	7	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-105	-917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1528.80764177694	1740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCTATGCACAGCT	NA	False	NA	1	True	ATTAAA	-12	NA	84571168	84621899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612153_84619757
ES.13956.86	chr16	+	1275	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-103	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACAACCTGGCATCTT	NA	False	NA	-2	True	AAGAAA	-31	NA	84571170	84619884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ES.13956.89	chr16	+	6302	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-101	123	intron_retention	FALSE	non_canonical	0	0	junction_7	1946.68821018013	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGAATGGCTTATGTG	NA	False	NA	27	True	AATATA	-18	NA	84571172	84620041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613639_84613691_84618191_84619200_84619253_84619674
ES.13956.9	chr16	+	4577	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-219	4	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTATGAATTATT	NA	False	NA	21	True	AATAAA	-24	NA	84570791	84622820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
ES.13956.91	chr16	+	4160	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1738.86183590733	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGGTCTATGAATT	NA	False	NA	18	True	AATAAA	-21	NA	84571216	84622817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606243_84606385_84609786_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.93	chr16	+	3942	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-57	-2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	1986.70448076143	1746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571216	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612153_84613153_84613262_84618147_84618191_84619674
ES.13956.94	chr16	+	4242	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1772.48799361237	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTTATGGTCTATGA	NA	False	NA	15	True	AATAAA	-18	NA	84571220	84622814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609709_84609987_84612056_84612157_84613153_84613285_84618147_84618191_84619674
ES.13956.95	chr16	+	4549	9	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-17	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1361.98577452189	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84571256	84623244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613275_84618147_84618191_84619674
ES.13956.98	chr16	+	2645	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	9	-656	9	656	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCCCTTTGGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	84571282	84608540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13956.99	chr16	+	998	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	13	987	13	-987	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTATATTACCGAGAAT	NA	False	NA	34	True	ATTAAA	-28	NA	84571286	84606897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ES.13957.1	chr16	-	1359	1	Antisense	novelGene_ENSMUSG00000053062.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAAATGGAGCTGGTAG	NA	False	NA	NA	False	NA	NA	NA	84571328	84569969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_84570000_84571300
ES.13958.1	chr16	-	958	1	Intergenic	novelGene_11699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTCATTCCGTTGAGTC	3519	False	NA	NA	False	NA	NA	NA	84581543	84580585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84580600_84581500
ES.13959.1	chr16	-	5225	1	Antisense	novelGene_ENSMUSG00000053062.17_AS_novelGene_ENSMUSG00002076438.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGATTTTATTTCAAT	2094	False	NA	NA	False	TATAAA	-15	NA	84619473	84614248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_84614200_84619500
ES.1396.1	chr1	-	1626	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGAGACTTG	NA	False	NA	NA	False	NA	NA	NA	134429163	134427537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134427500_134429200
ES.13960.1	chr16	+	5078	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-408	-2468	-408	4	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631404	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.10	chr16	+	8482	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-6	3	intron_retention	FALSE	canonical	3	375	junction_1	89.020977162689	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631806	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.11	chr16	+	6433	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-6	4	intron_retention	FALSE	canonical	3	375	junction_1	88.909715442127	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631806	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.12	chr16	+	2659	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-6	-451	-6	451	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAAAAATTTTTTTCT	NA	False	NA	NA	False	AATAAA	-44	NA	84631806	84658654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.13	chr16	+	4681	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	199.822390272764	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631806	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.14	chr16	+	4608	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	195.680010902153	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631806	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643191_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.15	chr16	+	4659	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	242.881976113889	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84631807	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654260_84654461_84657262
ES.13960.16	chr16	+	4473	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	198.991794742899	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84631807	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.17	chr16	+	1523	6	ISM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-5	8016	-5	-4279	5prime_fragment	FALSE	canonical	3	375	junction_1	109.055215372764	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGGGTTTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	84631807	84650187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347
ES.13960.18	chr16	+	4339	9	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	257.253249493568	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAATTATGTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	84631807	84660524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.2	chr16	+	4813	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-355	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	195.680010902153	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATTATGTATTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84631457	84660526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643191_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.20	chr16	+	2463	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	451	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	198.991794742899	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAAAAATTTTTTTCT	NA	False	NA	NA	False	AATAAA	-44	NA	84631807	84658654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.21	chr16	+	4585	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	244.365441778911	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTTTTGTTTTCT	NA	False	NA	7	True	AATAAA	-16	NA	84631807	84660668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657355
ES.13960.22	chr16	+	4583	11	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	189.608966032727	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84631807	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262_84657796_84657880
ES.13960.23	chr16	+	2782	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-4	-576	-4	-574	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCTCTCATTTGTTTT	NA	False	NA	NA	False	GATAAA	-14	NA	84631808	84658779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.24	chr16	+	1641	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	0	319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	199.822390272764	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGGATCTTTTTACG	NA	False	NA	2	True	TATAAA	-16	NA	84631812	84657636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.25	chr16	+	4527	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	2	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	199.822390272764	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAATTATGTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	84631814	84660524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.27	chr16	+	4236	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	2	279	intron_retention	FALSE	canonical	3	375	junction_1	88.909715442127	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTTTTGAATATT	NA	False	NA	22	True	AATAAA	-18	NA	84631814	84658482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.28	chr16	+	5186	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	2	4	intron_retention	FALSE	canonical	3	375	junction_1	87.8802452204134	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631814	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84654063_84654267_84654461_84657262
ES.13960.29	chr16	+	2449	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	20	283	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	180.387100904803	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTTGAATATTGCAT	NA	False	NA	26	True	AATAAA	-22	NA	84631832	84658486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.3	chr16	+	4523	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-91	-141	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_9	184.193403455561	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATTATGTATTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84631721	84660526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657355
ES.13960.31	chr16	+	1942	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	63	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	198.991794742899	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATGATATCATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	84631875	84658201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.33	chr16	+	4796	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	66	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	189.144141259621	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631878	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636265_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.34	chr16	+	3326	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	68	321	intron_retention	FALSE	canonical	3	375	junction_1	88.909715442127	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGATCTTTTTACGTT	NA	False	NA	4	True	TATAAA	-18	NA	84631880	84657638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.35	chr16	+	4349	8	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	68	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	215.310881077116	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631880	84660667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653921_84654063_84654267_84654461_84657262
ES.13960.36	chr16	+	3056	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-109	2040	90	424	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGCTTGCTAACACTAA	NA	False	NA	NA	False	AATAAA	-17	NA	84631902	84658627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.37	chr16	+	5093	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-101	-5	98	5	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTTGTTTTCTTCTG	NA	False	NA	11	True	AATAAA	-20	NA	84631910	84660672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.38	chr16	+	5097	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	98	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631910	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.39	chr16	+	7886	9	ISM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-93	-4	-93	4	intron_retention	FALSE	canonical	3	317	junction_1	105.306027249156	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631918	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267
ES.13960.4	chr16	+	2244	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-41	-1	-41	1	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATATCATTCTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	84631771	84658204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.40	chr16	+	5090	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-93	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84631918	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654254_84654461_84657262
ES.13960.41	chr16	+	6840	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-93	3	intron_retention	FALSE	canonical	3	317	junction_1	105.718967077814	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631918	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.42	chr16	+	2587	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-88	-8	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCCAAAATGATATC	NA	False	NA	NA	False	AATAAA	-12	NA	84631923	84658195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.43	chr16	+	4939	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-87	135	-87	-135	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTATTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	84631924	84660532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.45	chr16	+	2888	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	-72	2171	-72	293	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGCATATATGACTCT	NA	False	NA	36	True	AATAAA	-32	NA	84631939	84658496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.46	chr16	+	5038	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-64	3	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631947	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.47	chr16	+	4931	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_9	189.840869033924	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631974	84660667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657355
ES.13960.5	chr16	+	4692	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-38	4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	180.387100904803	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84631774	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.51	chr16	+	2515	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	8	2464	8	0	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGATATCATTCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	84632019	84658203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.52	chr16	+	4586	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	209	3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	204.339446448795	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84632220	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.53	chr16	+	4619	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	209	-143	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAATTATGTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	84632220	84660524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.54	chr16	+	4358	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	209	287	intron_retention	FALSE	canonical	3	317	junction_1	105.718967077814	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGAATATTGCATATAT	NA	False	NA	30	True	AATAAA	-26	NA	84632220	84658490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.55	chr16	+	1744	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	212	3031	212	319	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGGATCTTTTTACG	NA	False	NA	2	True	TATAAA	-16	NA	84632223	84657636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.56	chr16	+	4433	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	218	-141	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	204.339446448795	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATTATGTATTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84632229	84660526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.57	chr16	+	5636	8	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	222	319	intron_retention	FALSE	canonical	3	317	junction_1	99.6413978387764	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGGATCTTTTTACG	NA	False	NA	2	True	TATAAA	-16	NA	84632233	84657636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.58	chr16	+	4626	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	222	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAACAATTATGTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	84632233	84660522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.59	chr16	+	4574	9	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	226	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.574862756393	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTTGTTTTCTT	NA	False	NA	8	True	AATAAA	-17	NA	84632237	84660669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.6	chr16	+	8601	8	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	-30	3	intron_retention	FALSE	canonical	3	375	junction_1	80.5815596467457	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84631782	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84631912_84635968_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.60	chr16	+	2595	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	226	292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTGCATATATGACTC	NA	False	NA	35	True	AATAAA	-31	NA	84632237	84658495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.61	chr16	+	4706	11	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	227	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	194.659292097757	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84632238	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262_84660414_84660464
ES.13960.62	chr16	+	5615	8	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	237	321	intron_retention	FALSE	canonical	0	0	junction_5	211.659912046063	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGATCTTTTTACGTT	NA	False	NA	4	True	TATAAA	-18	NA	84632248	84657638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653929_84654063_84654267_84654461_84657262
ES.13960.63	chr16	+	2462	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	241	174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACATGTTTAACGTTTGA	NA	False	NA	-83	True	GATAAA	-19	NA	84632252	84658377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.64	chr16	+	2556	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	244	293	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGCATATATGACTCT	NA	False	NA	36	True	AATAAA	-32	NA	84632255	84658496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.65	chr16	+	1694	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	246	319	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	186.346153405132	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGGATCTTTTTACG	NA	False	NA	2	True	TATAAA	-16	NA	84632257	84657636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.66	chr16	+	4730	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	203.126002371696	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84632258	84660667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654451_84657262
ES.13960.67	chr16	+	3839	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	253	413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.095701840824	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGCGAGTTTTCCATG	NA	False	NA	NA	False	AATGAA	-15	NA	84632264	84659766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654261_84654461_84657262
ES.13960.69	chr16	+	4721	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	255	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	203.126002371696	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	NA	False	NA	3	True	AATAAA	-12	NA	84632266	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657270
ES.13960.7	chr16	+	2525	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-30	-293	-30	293	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGCATATATGACTCT	NA	False	NA	36	True	AATAAA	-32	NA	84631782	84658496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.70	chr16	+	4769	10	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	258	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	244.108354811729	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTTTTGTTTTCT	NA	False	NA	7	True	AATAAA	-16	NA	84632269	84660668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653294_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.71	chr16	+	4545	9	NNC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	263	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.574862756393	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTGTTTTCTTC	NA	False	NA	9	True	AATAAA	-18	NA	84632274	84660670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654254_84654461_84657262
ES.13960.72	chr16	+	985	6	ISM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	267	11067	267	-4866	5prime_fragment	FALSE	canonical	3	317	junction_1	130.426071013429	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTTTTTATTCTGT	NA	False	NA	NA	False	ACTAAA	-18	NA	84632278	84649600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347
ES.13960.74	chr16	+	3449	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	268	323	intron_retention	FALSE	canonical	3	317	junction_1	105.718967077814	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCTTTTTACGTTGA	NA	False	NA	6	True	TATAAA	-20	NA	84632279	84657640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.75	chr16	+	3427	10	NNC	ENSMUSG00000008976.17	novel	586	6	NA	NA	999	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.60982782932	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATATCATTCTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	84633010	84658204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_84634334_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.76	chr16	+	4572	9	ISM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	3956	-4	3956	4	3prime_fragment	FALSE	canonical	3	528	junction_7	48.8542155294709	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTGTTTTCTTCT	NA	False	NA	10	True	AATAAA	-19	NA	84635967	84660671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.78	chr16	+	4685	7	NIC	ENSMUSG00000008976.17	novel	586	6	NA	NA	-6842	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	280.300235858306	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGGTTTTTGTT	2457	False	NA	3	True	AATAAA	-12	NA	84642628	84660664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84643258_84649347_84649543_84651839_84651911_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.79	chr16	+	5058	3	NIC	ENSMUSG00000008976.17	novel	586	6	NA	NA	-69	268	intron_retention	FALSE	canonical	3	528	junction_2	19.5	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTTTCATTTTTTTTC	9230	False	NA	11	True	AATAAA	-7	NA	84649401	84658471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_84649543_84653349_84654063_84654267
ES.13960.8	chr16	+	4549	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-18	-2329	-18	-135	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTATTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	84631794	84660532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13960.9	chr16	+	3629	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	-9	-1418	-9	268	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTAATTCATGGTAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	84631803	84659621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ES.13961.11	chr16	-	414	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3187.52906740559	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631746	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628332_84631696
ES.13961.12	chr16	-	515	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3387.12277112399	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631871	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624879_84625312_84625438_84628216_84628396_84631779
ES.13961.13	chr16	-	612	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	3183.80097786697	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84632018	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631829
ES.13961.14	chr16	-	800	5	FSM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	8	1	8	-1	multi-exon	FALSE	canonical	3	55	junction_4	2792.56360715383	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84632505	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632308
ES.13961.15	chr16	-	6435	2	FSM	ENSMUSG00000022890.14	ENSMUST00000144799.2	514	2	-5922	1	97	-1	multi-exon	FALSE	canonical	3	6096	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631623	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84624884_84625312
ES.13961.16	chr16	-	500	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	2773.78313660042	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631743	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625463_84628216_84628396_84631696
ES.13961.2	chr16	-	4535	3	FSM	ENSMUSG00000022890.14	ENSMUST00000146103.2	526	3	-4004	-5	-9	2	multi-exon	FALSE	canonical	3	6096	junction_1	588.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCCTTTAAATTCTTT	NA	False	NA	0	True	AATAAA	-20	NA	84632499	84624756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84624884_84625312_84625438_84628216
ES.13961.20	chr16	-	1546	6	NNC	ENSMUSG00000022890.14	novel	742	6	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	2392.31230402721	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631699	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84626436_84626682_84628216_84628396_84630707_84630763_84630881
ES.13961.21	chr16	-	465	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3187.52906740559	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631740	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628389_84631696
ES.13961.22	chr16	-	3452	5	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	14	-1	intron_retention	TRUE	non_canonical	0	0	junction_2	2569.66071447185	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84632476	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625752_84625795_84628391_84631696_84631870_84632355
ES.13961.23	chr16	-	1264	4	FSM	ENSMUSG00000022890.14	ENSMUST00000114193.8	680	4	-590	6	3	-1	multi-exon	FALSE	canonical	1	103	junction_3	3139.53779329945	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631717	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630881
ES.13961.24	chr16	-	6656	3	NNC	ENSMUSG00000022890.14	novel	526	3	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_2	3048	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTCCTTTAAATT	NA	False	NA	-4	True	AATAAA	-16	NA	84631889	84624760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625752_84625795
ES.13961.25	chr16	-	463	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3130.39255614301	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84631743	84624761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625322_84625438_84628216_84628396_84631696
ES.13961.26	chr16	-	6048	2	FSM	ENSMUSG00000022890.14	ENSMUST00000150502.2	376	2	-23	-5649	-23	0	multi-exon	FALSE	canonical	3	198	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84631743	84624761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84630763_84631696
ES.13961.27	chr16	-	619	6	NNC	ENSMUSG00000022890.14	novel	742	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3214.33119637663	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84631721	84624761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84630881_84630995_84631696
ES.13961.28	chr16	-	3639	3	NNC	ENSMUSG00000022890.14	novel	927	2	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_1	2870	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84631745	84624761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84625752_84625795_84628396_84631696
ES.13961.29	chr16	-	3263	5	NNC	ENSMUSG00000022890.14	novel	742	6	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2540.82411581361	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84631743	84624761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625752_84625795_84628396_84630707_84630763_84631696
ES.13961.3	chr16	-	3382	3	NIC	ENSMUSG00000022890.14	novel	809	5	NA	NA	23	0	intron_retention	FALSE	canonical	3	5740	junction_2	178	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631870	84624758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84624884_84625312_84628396_84631696
ES.13961.31	chr16	-	6515	2	NNC	ENSMUSG00000022890.14	novel	927	2	NA	NA	-199	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTATCAAATGTCCT	NA	False	NA	-11	True	AATAAA	-9	NA	84631326	84624767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84625757_84625800
ES.13961.4	chr16	-	7007	1	NIC	ENSMUSG00000022890.14	novel	742	6	NA	NA	-45	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631765	84624758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_84624800_84631800
ES.13961.5	chr16	-	1972	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	-794	1	-672	-1	intron_retention	FALSE	canonical	3	198	junction_4	3188.04854103572	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84633185	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
ES.13961.6	chr16	-	527	5	NNC	ENSMUSG00000022890.14	novel	742	6	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	3237.49566602027	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631743	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630760_84631696
ES.13961.8	chr16	-	606	5	NNC	ENSMUSG00000022890.14	novel	742	6	NA	NA	53	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	3239.37127387399	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGTCCTTTAAATTC	NA	False	NA	-3	True	AATAAA	-17	NA	84631667	84624759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631544
ES.13962.1	chr16	-	1443	1	Intergenic	novelGene_11702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGGGGGGGAGAGTAA	NA	False	NA	NA	False	CATAAA	-42	NA	84651189	84649746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84649700_84651200
ES.13963.1	chr16	+	2485	1	Intergenic	novelGene_11704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATCCTACCTGCTCATT	3826	False	NA	NA	False	NA	NA	NA	84856720	84859205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_84856700_84859200
ES.13964.10	chr16	-	2368	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	116	692	62	13	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGCTTTCTCTCTTTA	7447	False	NA	NA	False	AATATA	-15	NA	84970530	84752022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13964.11	chr16	-	1478	7	ISM	ENSMUSG00000022892.12	ENSMUST00000227990.2	2197	14	-70	48643	-8	-29042	5prime_fragment	FALSE	canonical	3	39	junction_1	5.78551831923659	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTAGTAGTCATCATA	7315	False	NA	NA	False	AATAAA	-17	NA	84970662	84840234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13964.12	chr16	-	204	1	Intergenic	novelGene_11703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTGTTGTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	84843034	84842830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84842800_84843000
ES.13964.13	chr16	-	180	1	Intergenic	novelGene_11705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTGATCCTTAA	NA	False	NA	NA	False	NA	NA	NA	84934029	84933849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_84933800_84934000
ES.13964.14	chr16	-	1780	2	Genic_Genomic	ENSMUSG00000022892.12	novel	8167	18	NA	NA	9	-157257	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGGAGCATTTTACT	7394	False	NA	NA	False	ATTAAA	-12	NA	84970583	84968449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_84969151_84969504
ES.13964.2	chr16	-	3409	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	5	4753	-3	0	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTTCTTTGAAGGGTGA	7328	False	NA	-1	True	AATAAA	-24	NA	84970649	84751325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13964.5	chr16	-	3180	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	-1	-3	-1	0	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTTCTTTGAAGGGT	7330	False	NA	-3	True	AATAAA	-22	NA	84970647	84751327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13964.6	chr16	-	3321	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	3	-204	3	0	multi-exon	FALSE	canonical	3	10	junction_10	13.879925927396	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTTCTTTGAAGGGT	7357	False	NA	-3	True	AATAAA	-22	NA	84970620	84751327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13964.9	chr16	-	2718	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	64	5385	2	78	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTAGCTGTA	7387	False	NA	NA	False	NA	NA	NA	84970590	84751957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ES.13965.1	chr16	-	208	1	Intergenic	novelGene_11706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAAACAAAAAATTGT	9837	False	NA	NA	False	NA	NA	NA	85110750	85110542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_85110500_85110800
ES.13966.1	chr16	-	1856	1	FSM	ENSMUSG00000089698.2	ENSMUST00000161209.2	711	1	137	-1282	137	1282	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTAACACCATGTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	85350694	85348838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_85348800_85350700
ES.13967.1	chr16	+	177	1	Intergenic	novelGene_11707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85582389	85582566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_85582400_85582600
ES.13968.1	chr16	-	4884	9	FSM	ENSMUSG00000022893.15	ENSMUST00000023610.15	4884	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGCCATATTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	85600001	85590714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_85592989_85593526_85593703_85594605_85594782_85594891_85595079_85595297_85595585_85595933_85596102_85596423_85596557_85596977_85597325_85598865
ES.13969.1	chr16	-	175	1	Intergenic	novelGene_11708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	86719070	86718895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_86718900_86719100
ES.1397.1	chr1	+	714	5	Antisense	novelGene_ENSMUSG00000046367.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.1650635094611	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGCTAACAGTTTTT	62	False	NA	NA	False	AATAAA	-21	NA	134455606	134475299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_134455766_134457294_134457384_134457865_134457970_134474818_134474934_134475052
ES.13970.1	chr16	-	176	1	Intergenic	novelGene_11709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGATGCATCTT	NA	False	NA	NA	False	NA	NA	NA	87073277	87073101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_87073100_87073300
ES.13971.1	chr16	+	1866	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	28	-10	-14	10	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAGCGTCTGTTTTA	NA	False	NA	11	True	AATAAA	-36	NA	87151100	87165640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ES.13971.2	chr16	+	1695	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	-2	7	-2	-7	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGAACTTCAGCCTTT	NA	False	NA	-6	True	AATAAA	-19	NA	87151112	87165623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ES.13971.3	chr16	+	1625	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	40	219	-2	-219	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCACTGAACATGTAG	NA	False	NA	NA	False	AATAAA	-13	NA	87151112	87165411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ES.13971.4	chr16	+	6301	4	FSM	ENSMUSG00000044442.12	ENSMUST00000120284.8	3473	4	-11	-2817	5	-255	multi-exon	FALSE	canonical	3	124	junction_1	3.85861230093008	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAATAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	87151119	87165375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407
ES.13971.5	chr16	+	1167	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	47	670	5	387	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAATAAACCTAAC	NA	False	NA	NA	False	NA	NA	NA	87151119	87164960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ES.13971.6	chr16	+	6544	4	FSM	ENSMUSG00000044442.12	ENSMUST00000120284.8	3473	4	-7	-3064	-7	-8	multi-exon	FALSE	canonical	3	124	junction_1	3.85861230093008	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGAACTTCAGCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	87151123	87165622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407
ES.13971.7	chr16	+	1021	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	9	670	-7	387	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAATAAACCTAAC	NA	False	NA	NA	False	NA	NA	NA	87151123	87164960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ES.13971.8	chr16	+	1461	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	9	230	-7	-230	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGAATCCATTCCAC	NA	False	NA	NA	False	AATAAA	-2	NA	87151123	87165400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ES.13971.9	chr16	+	4379	3	NNC	ENSMUSG00000044442.12	novel	3473	4	NA	NA	8818	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	AAGAAA	-22	NA	87159950	87164572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87161937_87161971_87162095_87162302
ES.13972.1	chr16	+	715	3	Antisense	novelGene_ENSMUSG00000052299.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACCA	NA	False	NA	NA	False	NA	NA	NA	87175860	87178066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_87175899_87176566_87176734_87177556
ES.13973.1	chr16	+	325	1	Intergenic	novelGene_11710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	87204392	87204717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_87204400_87204700
ES.13974.1	chr16	+	214	1	Intergenic	novelGene_11711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTAATCCCTTTATA	NA	False	NA	NA	False	NA	NA	NA	87234455	87234669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_87234500_87234700
ES.13975.1	chr16	+	2936	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	268	1	-8	-1	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTATTAGAGTTTAAG	NA	False	NA	9	True	AATAAA	-17	NA	87251858	87280404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.10	chr16	+	2197	14	ISM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	309	3677	-15	-73	5prime_fragment	FALSE	canonical	3	153	junction_5	26.4939425922765	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAATAATTGTGAATTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	87251899	87276728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013
ES.13975.11	chr16	+	1934	13	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.390373580654	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGTTCACCTAAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	87251904	87280195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87258906_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278684_87279743_87279905_87279994
ES.13975.13	chr16	+	4057	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	153	junction_5	32.404663587549	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTGTTTTATTAGA	NA	False	NA	2	True	AATAAA	-10	NA	87251906	87280397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.14	chr16	+	2834	17	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-1	9	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	62.1846733025912	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTAAGTTGTTATTTA	NA	False	NA	19	True	AATAAA	-27	NA	87251913	87280414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.15	chr16	+	1707	10	NNC	ENSMUSG00000025616.15	novel	2561	17	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	102.097024781018	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATGTTCACCTAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	87251913	87280194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87258906_87268968_87269057_87273591_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.16	chr16	+	4557	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	153	junction_5	32.5715622386564	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	False	NA	4	True	AATAAA	-12	NA	87251913	87280399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87270074_87271469_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.18	chr16	+	5030	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	1	23	intron_retention	FALSE	canonical	3	153	junction_5	32.7332654446003	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAATCATGTTTAT	NA	False	NA	NA	False	AATAAA	-39	NA	87251915	87280221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.19	chr16	+	1420	7	FSM	ENSMUSG00000025616.15	ENSMUST00000131206.8	1405	7	-15	0	1	0	multi-exon	FALSE	canonical	3	153	junction_5	32.3045404445464	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGTCTCTACCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	87251915	87267912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241
ES.13975.2	chr16	+	3654	17	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	153	junction_5	31.7086344707558	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGTTCACCTAAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	87251869	87280195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.20	chr16	+	5950	15	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_9	66.8422220835097	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTTATTAGAGTT	NA	False	NA	5	True	AATAAA	-13	NA	87251915	87280400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87272362_87273603_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.21	chr16	+	4387	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	1	33	intron_retention	FALSE	canonical	3	153	junction_5	32.5715622386564	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTTATTTATTTAAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	87251915	87280231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87270074_87271469_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.22	chr16	+	3623	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	3	71	intron_retention	FALSE	canonical	2	2	junction_10	64.2216993442767	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTTTTGTATTAGCATA	NA	False	NA	NA	False	AATACA	-16	NA	87251917	87280269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87270074_87271469_87271562_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.23	chr16	+	3617	17	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_11	62.6033832452368	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	8	True	AATAAA	-16	NA	87251917	87280403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87272362_87273603_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.24	chr16	+	3929	17	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	3	-8	intron_retention	FALSE	canonical	3	153	junction_5	31.4795940848989	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTGTTTTATTAGA	NA	False	NA	2	True	AATAAA	-10	NA	87251917	87280397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87279905_87279994
ES.13975.25	chr16	+	2646	16	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	81.3385244245035	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	False	NA	4	True	AATAAA	-12	NA	87251917	87280399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87273594_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.26	chr16	+	5210	16	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	3	-2	intron_retention	FALSE	canonical	3	153	junction_5	32.7332654446003	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	8	True	AATAAA	-16	NA	87251917	87280403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.29	chr16	+	3702	16	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-7	-2	intron_retention	FALSE	canonical	2	6	junction_8	80.0631972603865	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	8	True	AATAAA	-16	NA	87251923	87280403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268720_87268968_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87278601_87278689_87279747_87279905_87279994
ES.13975.3	chr16	+	2789	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	280	136	-2	71	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTTTTGTATTAGCATA	NA	False	NA	NA	False	AATACA	-16	NA	87251870	87280269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.30	chr16	+	2115	13	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.6494213781555	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTGTTTTATTAGA	NA	False	NA	2	True	AATAAA	-10	NA	87251926	87280397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87258906_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.31	chr16	+	2433	15	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	66.8422220835097	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGTTCACCTAAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	87251934	87280195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87273591_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.32	chr16	+	2630	18	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	60.1647104833328	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGTTCACCTAAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	87251944	87280195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268720_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.34	chr16	+	3476	2	FSM	ENSMUSG00000025616.15	ENSMUST00000177275.2	358	2	-2901	-217	-1488	-2	multi-exon	FALSE	canonical	3	296	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTATTAGAGTTTAA	NA	False	NA	8	True	AATAAA	-16	NA	87276837	87280403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87279905_87279994
ES.13975.4	chr16	+	8694	4	NIC	ENSMUSG00000025616.15	novel	1405	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	153	junction_2	31.8433666561813	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTTGTCTCTACCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	87251870	87267911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87263245_87266562_87266751_87267241
ES.13975.5	chr16	+	3458	17	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	153	junction_5	31.8570415096882	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGTTCACCTAAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	87251870	87280195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.6	chr16	+	2737	17	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	79.9112789285718	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTTGTTTTATTAGA	NA	False	NA	2	True	AATAAA	-10	NA	87251870	87280397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277854_87278601_87278689_87279747_87279905_87279994
ES.13975.7	chr16	+	2811	18	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	-2	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.142357280878	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTTATTTATTTAAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	87251870	87280231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87259401_87259519_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.8	chr16	+	1947	10	NNC	ENSMUSG00000025616.15	novel	2561	17	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	102.097024781018	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	False	NA	4	True	AATAAA	-12	NA	87251878	87280399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87251991_87255528_87255631_87258852_87258906_87268968_87269057_87273591_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ES.13975.9	chr16	+	5157	15	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	6	1	intron_retention	FALSE	canonical	2	14	junction_12	63.654400107622	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTAGAGTTTAAGTT	NA	False	NA	11	True	AATAAA	-19	NA	87251878	87280406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87278601_87278689_87279747_87279905_87279994
ES.13976.1	chr16	+	2848	1	Antisense	novelGene_ENSMUSG00000025613.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAAATACTGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	87282512	87285360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_87282500_87285400
ES.13977.1	chr16	-	2342	16	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	22	128038	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1265.30357183124	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTCGTTCTGGAGACA	NA	False	NA	NA	False	AATAAA	-8	NA	87292725	87152175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87152183_87280236_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.100	chr16	-	4836	11	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	1341	112	intron_retention	FALSE	canonical	3	4287	junction_7	396.132061312891	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87291251	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87290675_87291224
ES.13977.105	chr16	-	1844	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-11	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1308.00241254536	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292772	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287219_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.106	chr16	-	1618	13	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-11	112	combination_of_known_splicesites	TRUE	canonical	1	13	junction_2	1333.85478084718	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292772	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.107	chr16	-	1802	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	23	112	combination_of_known_junctions	FALSE	canonical	3	4	junction_14	1300.67884355887	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292569	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292466
ES.13977.108	chr16	-	1810	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	31	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1754.85016512545	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292716	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284414_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288185_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.109	chr16	-	4531	10	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	32	112	intron_retention	FALSE	canonical	3	4588	junction_6	161.644175602379	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292715	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87284601_87285694_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.110	chr16	-	1792	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	31	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1256.7218369672	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292716	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283130_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.111	chr16	-	2698	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	4	112	intron_retention	FALSE	canonical	3	4287	junction_8	362.673716792479	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292743	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.112	chr16	-	4984	2	ISM	ENSMUSG00000025613.14	ENSMUST00000177376.8	1567	14	6191	-112	-754	112	intron_retention	FALSE	canonical	3	4874	junction_1	0	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87286485	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_87280954_87281691
ES.13977.113	chr16	-	1474	11	NIC	ENSMUSG00000025613.14	novel	1567	14	NA	NA	125	112	intron_retention	FALSE	canonical	3	4287	junction_8	434.704094758722	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87288211	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189
ES.13977.114	chr16	-	3221	11	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-20	112	intron_retention	FALSE	canonical	3	4287	junction_5	243.567670268449	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292781	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.115	chr16	-	3796	13	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	112	intron_retention	FALSE	canonical	3	4287	junction_7	377.462801699276	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292747	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.116	chr16	-	4180	12	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-14	112	intron_retention	FALSE	canonical	3	4588	junction_8	322.84504893189	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292775	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87284601_87285694_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.119	chr16	-	1726	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1308.18147652006	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292747	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284525_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.12	chr16	-	4408	14	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	28518	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.865614456007	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGGCCCATTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	87200933	87173540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179604_87191409_87191597_87193517_87193702_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893
ES.13977.121	chr16	-	1833	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1748.7452236226	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292758	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283231_87283320_87283409_87283482_87283551_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.122	chr16	-	5148	3	NIC	ENSMUSG00000025613.14	novel	1567	14	NA	NA	1242	112	intron_retention	FALSE	canonical	3	4882	junction_2	116.5	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87287094	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87282633_87282721_87284601_87285694
ES.13977.123	chr16	-	3820	10	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	24	112	intron_retention	FALSE	non_canonical	0	0	junction_8	1544.96069709089	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292723	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87282633_87282721_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290676_87291224_87291316_87292616
ES.13977.125	chr16	-	1922	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	112	intron_retention	FALSE	canonical	3	4287	junction_8	392.344266771721	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292758	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.126	chr16	-	1836	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	6	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1256.7218369672	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292755	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282788_87283119_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.127	chr16	-	1777	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-24	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1738.78373659667	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292700	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281805_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290676_87291224_87291316_87292616
ES.13977.128	chr16	-	2779	13	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	24	111	intron_retention	FALSE	canonical	3	4287	junction_8	372.419752728319	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292723	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.131	chr16	-	1817	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1744.69024939286	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292747	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288185_87288324_87290594_87290675_87291224_87291316_87292616
ES.13977.133	chr16	-	1106	9	NIC	ENSMUSG00000025613.14	novel	1567	14	NA	NA	61	111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1550.96073048288	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87288275	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189
ES.13977.134	chr16	-	3104	12	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	1	111	intron_retention	FALSE	canonical	3	4287	junction_6	238.484367178291	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292746	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87283240_87283320_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.135	chr16	-	1831	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	128	111	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	1301.4182216932	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292464	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292331
ES.13977.136	chr16	-	1831	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1309.6116888262	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCGTCTGTTTAATCA	NA	False	NA	-26	True	AATAAA	-12	NA	87292758	87280764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288198_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.140	chr16	-	1445	12	NNC	ENSMUSG00000025613.14	novel	1470	14	NA	NA	3	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1460.14167205766	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCGTCTGTTTAATC	NA	False	NA	-27	True	AATAAA	-11	NA	87292758	87280765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87288202_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.15	chr16	-	7150	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	-10	603	-10	-603	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCTTGACTTTGG	NA	False	NA	1	True	AATAAA	-21	NA	87229510	87174141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.18	chr16	-	5720	14	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	23175	-608	intron_retention	FALSE	canonical	3	153	junction_11	18.1893394878956	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTGGTTCTTGAC	NA	False	NA	-4	True	AATAAA	-16	NA	87206276	87174146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189
ES.13977.2	chr16	-	7674	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	69	0	20	0	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	87229431	87173538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.20	chr16	-	6824	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	1	918	1	-918	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTTATTGAAATAGTC	NA	False	NA	4	True	AATAAA	-29	NA	87229499	87174456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.21	chr16	-	5321	21	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	14092	-928	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	45.2502762422507	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTCAAAATGACTGTTAT	NA	False	NA	-6	True	AATAAA	-19	NA	87215359	87174466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322
ES.13977.22	chr16	-	6694	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	37	-928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.1454800558002	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTCAAAATGACTGTTAT	NA	False	NA	-6	True	AATAAA	-19	NA	87229414	87174466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194878_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.24	chr16	-	6724	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	38	-930	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.2152901515086	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGTCAAAATGACTGTT	NA	False	NA	-8	True	AATAAA	-17	NA	87229413	87174468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179498_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199051_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.25	chr16	-	5340	21	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	16846	-930	intron_retention	FALSE	canonical	1	3	junction_11	59.3374038865874	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGTCAAAATGACTGTT	NA	False	NA	-8	True	AATAAA	-17	NA	87212605	87174468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198519_87198791_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041
ES.13977.28	chr16	-	6608	31	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	40	-932	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.5371970381287	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAGTCAAAATGACTG	NA	False	NA	-10	True	AATAAA	-15	NA	87229411	87174470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175526_87175639_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.3	chr16	-	7477	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.0424938564459	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	87229429	87173538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.33	chr16	-	6513	29	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	40	-933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	51.9865072761722	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTAGTCAAAATGACT	NA	False	NA	-11	True	AATAAA	-14	NA	87229411	87174471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215455_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87229313
ES.13977.35	chr16	-	6612	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	81	1050	32	-1050	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTTCCATTTCATTT	NA	False	NA	NA	False	TTTAAA	-35	NA	87229419	87174588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.36	chr16	-	6209	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	65	1469	16	-1469	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGAAAACAATATT	NA	False	NA	NA	False	AATAAA	-20	NA	87229435	87175007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.37	chr16	-	6016	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	10	-1473	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.0424938564459	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATGTGTGGAGAAAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	87229441	87175011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.39	chr16	-	6024	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	89	1630	40	-1630	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATTTGAATTGTAAATG	NA	False	NA	NA	False	NA	NA	NA	87229411	87175168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.4	chr16	-	7474	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	39.8615588951438	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	87229412	87173538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.40	chr16	-	5775	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	10	1958	10	-1958	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCAGTTTTTTGGTCTG	NA	False	NA	57	True	NA	NA	NA	87229490	87175496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.42	chr16	-	5572	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	37	-2014	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	36.4000104532789	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAATTATAGAACTGAAA	NA	False	NA	1	True	AATAAA	-22	NA	87229414	87175552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179604_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.45	chr16	-	7027	28	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	40	-2015	intron_retention	FALSE	canonical	0	0	junction_20	50.5346992659893	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATTATAGAACTGAA	NA	False	NA	0	True	AATAAA	-21	NA	87229411	87175553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87179604_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215485_87217159_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.46	chr16	-	5346	29	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	41	-2015	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	49.3764563205533	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATTATAGAACTGAA	NA	False	NA	0	True	AATAAA	-21	NA	87229410	87175553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87179502_87179604_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.48	chr16	-	7369	27	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	41	-2017	intron_retention	FALSE	canonical	0	0	junction_6	51.5491378149766	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAATTATAGAACTG	NA	False	NA	-2	True	AATAAA	-19	NA	87229410	87175555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87178571_87179502_87179675_87191409_87191597_87193517_87194117_87194674_87194913_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.5	chr16	-	5360	7	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	33696	-1	intron_retention	FALSE	canonical	3	191	junction_6	8.62167810425171	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	87195755	87173539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539
ES.13977.51	chr16	-	6420	29	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	40	-2022	intron_retention	FALSE	canonical	0	0	junction_7	39.2012728864557	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTCTAAATTATAG	NA	False	NA	-7	True	AATAAA	-14	NA	87229411	87175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194878_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.53	chr16	-	5252	28	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	27	-2022	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.9532992125785	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTCTAAATTATAG	NA	False	NA	-7	True	AATAAA	-14	NA	87229424	87175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87177750_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.54	chr16	-	6234	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	38	-2022	intron_retention	FALSE	canonical	3	140	junction_25	19.5028451613542	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTCTAAATTATAG	NA	False	NA	-7	True	AATAAA	-14	NA	87229413	87175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.55	chr16	-	5606	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	60	-2022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.1869205775596	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTCTAAATTATAG	NA	False	NA	-7	True	AATAAA	-14	NA	87229391	87175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178565_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.56	chr16	-	5515	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	21	-2022	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	39.8653345396622	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTCTAAATTATAG	NA	False	NA	-7	True	AATAAA	-14	NA	87229430	87175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.57	chr16	-	5594	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	38	-2027	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.1454800558002	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTCAAAAATATTCTAAAT	NA	False	NA	-12	True	AATAAA	-9	NA	87229413	87175565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194878_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.58	chr16	-	6324	24	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	38	-3310	intron_retention	FALSE	canonical	0	0	junction_16	42.4707616539089	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGGAGATAATATGACAG	NA	False	NA	NA	False	NA	NA	NA	87229413	87176848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87217159_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.59	chr16	-	5185	27	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	38	-4557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.8748226239308	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATGCTGGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	87229413	87178095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208742_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.6	chr16	-	7609	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.3639557846721	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	87229412	87173539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195709_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.60	chr16	-	4953	24	ISM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	89	19904	40	16633	5prime_fragment	FALSE	canonical	3	140	junction_20	18.5327585101684	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTTGATATTTTA	NA	False	NA	NA	False	NA	NA	NA	87229411	87193442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.61	chr16	-	5534	23	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	17	16633	intron_retention	FALSE	canonical	3	140	junction_19	18.1852269531849	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTTGATATTTTA	NA	False	NA	NA	False	NA	NA	NA	87229434	87193442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.62	chr16	-	2344	12	FSM	ENSMUSG00000052299.10	ENSMUST00000232095.2	2360	12	58	-42	58	42	multi-exon	FALSE	canonical	3	5	junction_1	51.9704302448489	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTCGGCCCTAGATACT	NA	False	NA	NA	False	AATAAA	-13	NA	87229393	87210033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87210177_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.63	chr16	-	2019	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	False	NA	-4	True	AATAAA	-17	NA	87237471	87230294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
ES.13977.64	chr16	-	1890	17	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-18	20326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1644.0077126872	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATTTTTTTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	87292694	87259887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87259931_87274195_87274264_87280761_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.65	chr16	-	2447	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	-21	-32	-21	32	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATAATAGCCAGTA	NA	False	NA	19	True	NA	NA	NA	87292782	87280181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.66	chr16	-	2373	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1256.7218369672	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGGTGAACATAATTTA	NA	False	NA	-14	True	AATAAA	-27	NA	87292743	87280214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282788_87283119_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.69	chr16	-	2409	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	1302.26241908583	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTTAGGTGAACATAA	NA	False	NA	-18	True	AATAAA	-23	NA	87292790	87280218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283231_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.7	chr16	-	7524	30	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.583880241709	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	87229409	87173539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176605_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.72	chr16	-	3198	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	-65	intron_retention	FALSE	canonical	3	4287	junction_8	362.673716792479	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCTGTAAATTATTT	NA	False	NA	-12	True	AATAAA	-18	NA	87292758	87280278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.74	chr16	-	2013	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	49	332	35	330	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGGCCAGAGTTTATG	NA	False	NA	NA	False	AATATA	-15	NA	87292712	87280545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.75	chr16	-	1964	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	-53	483	-53	179	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTCTAGTCTGTTGTT	NA	False	NA	42	True	NA	NA	NA	87292814	87280696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.76	chr16	-	7572	4	ISM	ENSMUSG00000025613.14	ENSMUST00000176041.8	618	6	2320	-5077	-2091	134	3prime_fragment	FALSE	canonical	3	4287	junction_1	335.611216869891	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACTGTTCTCATTGTA	NA	False	NA	-3	True	AATAAA	-35	NA	87290427	87280741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_87285833_87287208_87287271_87287372_87287554_87288189
ES.13977.8	chr16	-	4315	12	NNC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	30730	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	58.7704597748627	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	87198721	87173539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198519
ES.13977.80	chr16	-	3612	12	NNC	ENSMUSG00000025613.14	novel	1567	14	NA	NA	-2076	126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1437.13145185726	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTCACATGACTGTTC	NA	False	NA	-11	True	AATAAA	-27	NA	87290412	87280749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287375_87287554_87288189
ES.13977.81	chr16	-	1853	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1309.6116888262	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTCACATGACTGTTC	NA	False	NA	-11	True	AATAAA	-27	NA	87292758	87280749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287548_87288185_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.84	chr16	-	3053	13	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-7	126	intron_retention	FALSE	canonical	3	4287	junction_7	240.960692967869	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTCACATGACTGTTC	NA	False	NA	-11	True	AATAAA	-27	NA	87292754	87280749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.87	chr16	-	3218	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	3	113	intron_retention	FALSE	canonical	3	4300	junction_7	361.01021965898	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292758	87280762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.9	chr16	-	7421	29	NIC	ENSMUSG00000052299.10	novel	7743	30	NA	NA	51	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	39.364126292546	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	87229400	87173539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87175896_87176563_87176732_87177554_87177750_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ES.13977.90	chr16	-	3686	12	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	2	112	intron_retention	FALSE	canonical	3	4287	junction_6	250.883694366879	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292745	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87282633_87282721_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.91	chr16	-	1828	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	31	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1742.3866417026	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292716	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281851_87282001_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.92	chr16	-	1778	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	31	112	combination_of_known_junctions	FALSE	canonical	3	341	junction_3	1215.80900252147	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292716	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282612_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.94	chr16	-	4417	13	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-2	112	intron_retention	FALSE	canonical	3	4287	junction_8	277.100300232405	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292749	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87290675_87291224_87291316_87292616
ES.13977.95	chr16	-	3731	10	NIC	ENSMUSG00000025613.14	novel	1567	14	NA	NA	-1004	112	intron_retention	FALSE	canonical	3	4287	junction_7	252.124307964676	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87289340	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189
ES.13977.97	chr16	-	3779	11	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-2	112	intron_retention	FALSE	canonical	3	4287	junction_5	244.274517704979	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292749	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_87280954_87281691_87283240_87283320_87283409_87283482_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ES.13977.98	chr16	-	1826	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	-2	112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1301.66468965157	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCGTCTGTTTAATCAC	NA	False	NA	-25	True	AATAAA	-13	NA	87292749	87280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291310_87292616
ES.13978.1	chr16	-	176	1	Intergenic	novelGene_11712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGTCAGTACATAT	NA	False	NA	NA	False	NA	NA	NA	87318795	87318619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_87318600_87318800
ES.13979.1	chr16	-	178	1	Intergenic	novelGene_11713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGGCGTGATGGG	NA	False	NA	NA	False	NA	NA	NA	87388763	87388585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_87388600_87388800
ES.1398.1	chr1	-	4382	2	FSM	ENSMUSG00000046367.11	ENSMUST00000052911.8	1360	2	-145	-2877	-145	2873	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTCGTGGTAATTTG	NA	False	NA	NA	False	NA	NA	NA	134474905	134465805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_134469904_134474621
ES.1398.2	chr1	-	4606	6	NNC	ENSMUSG00000046367.11	novel	1735	3	NA	NA	-686	2873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.6	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTCGTGGTAATTTG	NA	False	NA	NA	False	NA	NA	NA	134478106	134465805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134469904_134474363_134474461_134474789_134474922_134477210_134477291_134477724_134477830_134478012
ES.13980.1	chr16	+	5895	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	-27	-1	-27	1	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGTACATTTCTGTC	NA	False	NA	23	True	AATAAA	-26	NA	87495805	87530235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
ES.13980.2	chr16	+	2280	4	FSM	ENSMUSG00000025612.6	ENSMUST00000156958.2	2210	4	-78	8	-19	-8	multi-exon	FALSE	canonical	3	4	junction_3	14.0079342596338	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATACTTTATGATGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	87495813	87519800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289
ES.13980.3	chr16	+	4021	6	NNC	ENSMUSG00000025612.6	novel	5867	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.7837748900611	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAGTTGTACATTTCTG	NA	False	NA	21	True	AATAAA	-24	NA	87495831	87530233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324_87526571_87528416
ES.13980.4	chr16	+	889	3	ISM	ENSMUSG00000025612.6	ENSMUST00000156958.2	2210	4	-58	3630	1	-3630	5prime_fragment	FALSE	canonical	3	25	junction_2	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCTAGAATCCGGTGTC	NA	False	NA	NA	False	AATACA	-37	NA	87495833	87516178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_87495945_87512218_87512513_87515694
ES.13980.5	chr16	+	5649	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	60	158	1	-158	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCCTGTCCTATTAAGC	NA	False	NA	5	True	AATAAA	-15	NA	87495892	87530076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
ES.13980.6	chr16	+	759	2	NNC	ENSMUSG00000025612.6	novel	545	3	NA	NA	33360	-158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCCTGTCCTATTAAGC	NA	False	NA	5	True	AATAAA	-15	NA	87529251	87530076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_87529464_87529529
ES.13981.1	chr16	+	2021	1	Intergenic	novelGene_11714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCTAGGCCACTCTCCA	NA	False	NA	NA	False	TTTAAA	-45	NA	87617659	87619680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_87617700_87619700
ES.13982.1	chr16	+	3323	2	Intergenic	novelGene_11715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	89241728	89245094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89244952_89244994
ES.13983.1	chr16	-	171	2	Intergenic	novelGene_11716	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGCATAAATGAAT	6892	False	NA	NA	False	NA	NA	NA	89564288	89531095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89531120_89564141
ES.13983.2	chr16	-	177	1	Intergenic	novelGene_11717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6890	False	NA	NA	False	NA	NA	NA	89564290	89564113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89564100_89564300
ES.13984.1	chr16	+	5509	5	Antisense	novelGene_ENSMUSG00000002489.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATGAATTCTGTTATCA	NA	False	NA	NA	False	ATTAAA	-21	NA	89579652	89590945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_89579744_89580421_89580641_89581236_89581351_89584208_89584347_89585998
ES.13985.1	chr16	+	3040	1	Intergenic	novelGene_11718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGCCTTTCTCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	89707258	89710298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89707300_89710300
ES.13986.1	chr16	+	5181	1	Intergenic	novelGene_11720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGATAGGGGCTGGAGA	NA	False	NA	NA	False	GATAAA	-27	NA	89740238	89745419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89740200_89745400
ES.13987.1	chr16	+	1003	1	Intergenic	novelGene_11722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGTAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89789690	89790693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89789700_89790700
ES.13988.1	chr16	+	2138	1	Intergenic	novelGene_11724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCAGGCCTGCAGG	NA	False	NA	NA	False	NA	NA	NA	89847137	89849275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89847100_89849300
ES.13989.1	chr16	+	176	1	Intergenic	novelGene_11726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	89920416	89920592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89920400_89920600
ES.1399.1	chr1	+	2454	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTGTGTTCAAGTTC	3328	False	NA	NA	False	NA	NA	NA	134484521	134486975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134484500_134487000
ES.13990.1	chr16	+	168	1	Intergenic	novelGene_11727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	89921166	89921334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89921200_89921300
ES.13991.1	chr16	-	7294	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	15.0582772812045	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTCCCTGTGCCTTTTT	7779	False	NA	2	True	AATAAA	-18	NA	89940724	89583995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89940572
ES.13991.10	chr16	-	7268	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	14.291204302233	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7779	False	NA	-1	True	AATAAA	-15	NA	89940724	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89609941_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
ES.13991.11	chr16	-	7274	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	5646	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.8500584070864	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	89935011	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89934928
ES.13991.13	chr16	-	7121	27	NIC	ENSMUSG00000002489.17	novel	7289	28	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	17.9391228932051	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGACTTCCCTGTGCCT	7779	False	NA	-2	True	AATAAA	-14	NA	89940724	89583999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89940572
ES.13991.15	chr16	-	7316	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	21.110133943252	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCGACTTCCCTGTGCC	7779	False	NA	-3	True	AATAAA	-13	NA	89940724	89584000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596863_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652898_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752992_89863408_89863461_89940572
ES.13991.17	chr16	-	7488	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	5270	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	18.4690861402816	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTCGACTTCCCTGTGC	NA	False	NA	-4	True	AATAAA	-12	NA	89935387	89584001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752992_89863404_89863461_89935087
ES.13991.18	chr16	-	7205	28	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	5384	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	17.6729160466297	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTCGACTTCCCTGTGC	NA	False	NA	-4	True	AATAAA	-12	NA	89935273	89584001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89935087
ES.13991.19	chr16	-	7293	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-71	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8612631649245	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTCGACTTCCCTGTGC	7775	False	NA	-4	True	AATAAA	-12	NA	89940728	89584001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589940_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
ES.13991.2	chr16	-	7720	29	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-443	1	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	9.36450092375565	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGACTTCCCTGTGCCTTT	7403	False	NA	0	True	AATAAA	-16	NA	89941100	89583997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
ES.13991.21	chr16	-	7348	27	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-420	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	14.8004477782893	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGCTTCGACTTCCCT	7426	False	NA	-8	True	AATAAA	-8	NA	89941077	89584005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89863408_89863461_89940572
ES.13991.23	chr16	-	7640	30	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	5211	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	20.9623976807984	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGCTTCGACTTCCCT	NA	False	NA	-8	True	AATAAA	-8	NA	89935446	89584005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752992_89776866_89776968_89863408_89863461_89935087
ES.13991.25	chr16	-	3855	3	ISM	ENSMUSG00000002489.17	ENSMUST00000178095.2	1465	4	-946	-961	-946	269	intron_retention	FALSE	canonical	3	60	junction_1	5	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTGGTTTTCTTAAGA	NA	False	NA	NA	False	NA	NA	NA	89593116	89584348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_89586480_89589889_89590063_89591565
ES.13991.26	chr16	-	6244	29	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-70	209	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	9.36450092375565	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTTTAAATGTAT	7776	False	NA	NA	False	AATAAA	-16	NA	89940727	89585100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
ES.13991.27	chr16	-	6228	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.1613095154379	139	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTTTTTTTAAATG	7779	False	NA	NA	False	AATAAA	-13	NA	89940724	89585103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596942_89601571_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655555_89657092_89657240_89662117_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940572
ES.13991.29	chr16	-	6065	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-65	204	combination_of_known_junctions	FALSE	canonical	1	8	junction_25	13.3559478999909	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATTTTTTTTTTAAA	7781	False	NA	NA	False	AATAAA	-11	NA	89940722	89585105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
ES.13991.3	chr16	-	7178	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_25	13.3559478999909	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7775	False	NA	-1	True	AATAAA	-15	NA	89940728	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
ES.13991.30	chr16	-	919	1	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	9847	1	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGCAAAGCAAACTGGG	NA	False	NA	NA	False	NA	NA	NA	89706026	89705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89705100_89706000
ES.13991.31	chr16	-	1153	1	Intergenic	novelGene_11719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAAAGAAAA	8417	False	NA	NA	False	NA	NA	NA	89724764	89723611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89723600_89724800
ES.13991.32	chr16	-	197	1	Intergenic	novelGene_11721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89743356	89743159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89743200_89743400
ES.13991.33	chr16	-	163	1	Intergenic	novelGene_11723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7253	False	NA	NA	False	NA	NA	NA	89825960	89825797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89825800_89826000
ES.13991.34	chr16	-	177	1	Intergenic	novelGene_11725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	89912627	89912450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89912400_89912600
ES.13991.35	chr16	-	178	1	Intergenic	novelGene_11728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTTAGAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	89928073	89927895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89927900_89928100
ES.13991.4	chr16	-	10587	27	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-70	0	intron_retention	FALSE	canonical	1	8	junction_24	13.6076140363884	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7776	False	NA	-1	True	AATAAA	-15	NA	89940727	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
ES.13991.5	chr16	-	7387	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-458	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.8500584070864	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7388	False	NA	-1	True	AATAAA	-15	NA	89941115	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940919
ES.13991.6	chr16	-	7478	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.8500584070864	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7775	False	NA	-1	True	AATAAA	-15	NA	89940728	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89940441
ES.13991.7	chr16	-	7271	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	20.4666229031862	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7779	False	NA	-1	True	AATAAA	-15	NA	89940724	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752992_89776866_89776968_89863408_89863461_89940572
ES.13991.8	chr16	-	7275	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	5602	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.8500584070864	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	89935055	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89863408_89863461_89934971
ES.13991.9	chr16	-	7640	29	NNC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-443	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	20.4666229031862	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7403	False	NA	-1	True	AATAAA	-15	NA	89941100	89583998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89776870_89776961_89863408_89863461_89940572
ES.13992.1	chr16	+	168	1	Intergenic	novelGene_11729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	89953140	89953308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89953100_89953300
ES.13993.1	chr16	-	195	1	Intergenic	novelGene_11730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTAACAATTAATTAGG	6826	False	NA	NA	False	NA	NA	NA	89953995	89953800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89953800_89954000
ES.13994.1	chr16	-	181	1	Intergenic	novelGene_11731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAAACAAAACAAGA	5785	False	NA	NA	False	NA	NA	NA	89955036	89954855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89954900_89955000
ES.13995.1	chr16	+	177	1	Intergenic	novelGene_11732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGGAAGCTAATG	NA	False	NA	NA	False	NA	NA	NA	89967782	89967959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89967800_89968000
ES.13996.1	chr16	+	122	1	Intergenic	novelGene_11733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89970179	89970301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_89970200_89970300
ES.13997.1	chr16	-	161	1	Intergenic	novelGene_11734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	89979884	89979723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_89979700_89979900
ES.13998.1	chr16	+	525	5	NNC	ENSMUSG00000022982.11	novel	3970	3	NA	NA	-1066	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	310.281626107638	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGACTCCTTTGAC	NA	False	NA	21	True	ATTAAA	-20	NA	90016575	90023219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90016634_90019667_90019765_90021243_90021314_90022032_90022151_90023037
ES.13998.2	chr16	+	675	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	-32	-2	-32	2	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGACTCCTTTGAC	NA	False	NA	21	True	ATTAAA	-20	NA	90017609	90023219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
ES.13998.4	chr16	+	2190	4	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	294	7	294	-7	3prime_fragment	FALSE	canonical	3	621	junction_1	78.8416133777081	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTAACTGTGTGAC	NA	False	NA	12	True	ATTAAA	-11	NA	90017935	90023210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_90019765_90021243_90021314_90022032_90022151_90023037
ES.13998.5	chr16	+	4301	2	NIC	ENSMUSG00000022982.11	novel	3970	3	NA	NA	388	0	intron_retention	FALSE	canonical	3	813	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	19	True	ATTAAA	-18	NA	90018029	90023217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_90022151_90023037
ES.13998.6	chr16	+	2092	3	FSM	ENSMUSG00000022982.11	ENSMUST00000232505.2	3970	3	1876	2	1876	-2	multi-exon	FALSE	canonical	3	735	junction_1	39	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAACTGTGTGACTCCTT	NA	False	NA	17	True	ATTAAA	-16	NA	90019517	90023215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_90021314_90022032_90022151_90023037
ES.13998.7	chr16	+	459	4	NNC	ENSMUSG00000022982.11	novel	641	5	NA	NA	2023	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	322.982971687363	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTAACTGTGTGAC	NA	False	NA	12	True	ATTAAA	-11	NA	90019664	90023210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90019765_90021243_90021314_90022032_90022151_90023039
ES.13999.1	chr16	+	4129	12	Antisense	novelGene_ENSMUSG00000022983.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATTTGCTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	90039324	90051504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90039543_90039761_90039845_90039926_90040096_90041095_90041258_90042270_90042426_90044057_90044172_90044532_90044634_90045400_90045587_90046509_90046600_90046943_90047324_90048760_90048872_90049144
ES.14.1	chr1	+	2423	9	NNC	ENSMUSG00000025903.15	novel	4456	2	NA	NA	-170	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	268.615896774558	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTACTGTTTCTTTTT	NA	False	NA	28	True	AATAAA	-29	NA	4877840	4916969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4877910_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.10	chr1	+	2347	10	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	25	1005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	255.298711510194	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGATAAGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	4878077	4919638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185_4915932_4918735
ES.14.11	chr1	+	669	7	NNC	ENSMUSG00000025903.15	novel	877	8	NA	NA	28	-3115	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	305.803313694712	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATATATAGTAATATGG	NA	False	NA	NA	False	AATAAA	-15	NA	4878080	4908077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4907824
ES.14.12	chr1	+	2451	8	NNC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	33	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.122604909435	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGATTGCTTTATATA	NA	False	NA	13	True	AATAAA	-14	NA	4878085	4916954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4878210_4898786_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.13	chr1	+	2409	8	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-12	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	279.122604909435	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATTGCTTTATATAGTA	NA	False	NA	16	True	AATAAA	-17	NA	4878106	4916957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.14	chr1	+	848	9	NNC	ENSMUSG00000025903.15	novel	877	8	NA	NA	-2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	354.951030953567	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTTATTCAATTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	4878116	4911491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4907824_4907878_4909609_4909712_4911178
ES.14.15	chr1	+	2562	9	NIC	ENSMUSG00000025903.15	novel	660	8	NA	NA	-89	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	268.615896774558	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCTTTATATAGTACT	NA	False	NA	18	True	AATAAA	-19	NA	4878370	4916959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878589_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.16	chr1	+	2427	9	NIC	ENSMUSG00000025903.15	novel	660	8	NA	NA	-88	-137	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	268.615896774558	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAGTTATTCTATCTG	NA	False	NA	NA	False	CATAAA	-3	NA	4878371	4916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878589_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.17	chr1	+	2379	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4882723	4885102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_4882700_4885100
ES.14.18	chr1	+	5023	2	ISM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	29981	-1392	987	5	3prime_fragment	FALSE	canonical	3	734	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTACTGTTTCTTT	NA	False	NA	26	True	AATAAA	-27	NA	4908114	4916967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_4911356_4915185
ES.14.19	chr1	+	5369	1	Genic_Genomic	ENSMUSG00000025903.15	novel	NA	NA	NA	NA	7142	1005	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGATAAGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	4914269	4919638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_4914300_4919600
ES.14.2	chr1	+	2711	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	-195	-9	-160	9	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTACTGTTTCTTTTTTC	NA	False	NA	30	True	AATAAA	-31	NA	4877850	4916971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.20	chr1	+	412	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4919078	4919490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_4919100_4919500
ES.14.3	chr1	+	2130	9	NIC	ENSMUSG00000025903.15	novel	1136	10	NA	NA	-122	972	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	270.330700254337	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACTGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4877888	4919605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4918362
ES.14.4	chr1	+	2462	8	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	278.899074716197	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATTGCTTTATATAGTA	NA	False	NA	16	True	AATAAA	-17	NA	4878037	4916957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4878677_4878710_4898806_4898873_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.5	chr1	+	2401	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	-87	-1384	1	-3	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCTTTATATAGTACT	NA	False	NA	18	True	AATAAA	-19	NA	4878046	4916959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
ES.14.6	chr1	+	883	8	FSM	ENSMUSG00000025903.15	ENSMUST00000150971.8	877	8	8	-14	8	14	multi-exon	FALSE	canonical	3	756	junction_6	40.2700070696263	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCCTTTTACAAATGAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	4878060	4911523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178
ES.14.7	chr1	+	2338	6	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	9	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	309.839700490431	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGATTGCTTTATATAG	NA	False	NA	14	True	AATAAA	-15	NA	4878061	4916955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.8	chr1	+	2369	7	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	282.033094984732	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATTGCTTTATATAGTA	NA	False	NA	16	True	AATAAA	-17	NA	4878064	4916957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4878677_4878710_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ES.14.9	chr1	+	4805	8	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	13	6	intron_retention	FALSE	canonical	3	734	junction_7	44.9784528912433	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGTACTGTTTCTTTT	NA	False	NA	27	True	AATAAA	-28	NA	4878065	4916968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4909712_4911178_4911356_4915185
ES.140.1	chr1	+	6183	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	15931801	15937984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_15931800_15938000
ES.1400.1	chr1	+	5707	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-81	3088	-81	675	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACAGCTTCTTCTGCC	6634	False	NA	13	True	AATAAA	-23	NA	134487827	134559935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.100	chr1	+	6424	25	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	24961	-1361	-2824	1361	3prime_fragment	FALSE	canonical	0	0	junction_2	197.588688771791	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	NA	False	NA	24	True	ATTAAA	-16	NA	134512890	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.101	chr1	+	4928	25	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	27749	3338	-57	425	3prime_fragment	FALSE	canonical	0	0	junction_1	201.946293740577	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	134515657	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.102	chr1	+	4636	23	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	33157	3335	5351	428	3prime_fragment	FALSE	canonical	3	725	junction_12	89.2526940121683	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	NA	False	NA	9	True	ATTAAA	-19	NA	134521065	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.103	chr1	+	4742	22	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	35627	3095	7821	668	3prime_fragment	FALSE	canonical	3	725	junction_11	86.2298252720015	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAGACTACAGCTTC	NA	False	NA	6	True	AATAAA	-16	NA	134523535	134559928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.104	chr1	+	4502	22	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	35627	3335	7821	428	3prime_fragment	FALSE	canonical	3	725	junction_11	86.2298252720015	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	NA	False	NA	9	True	ATTAAA	-19	NA	134523535	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.105	chr1	+	4383	21	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	37411	3356	9605	407	3prime_fragment	FALSE	canonical	3	725	junction_10	85.8346666563108	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAACTTCTAA	NA	False	NA	-12	True	NA	NA	NA	134525319	134559667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.106	chr1	+	5337	21	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	37411	2402	9605	1361	3prime_fragment	FALSE	canonical	3	725	junction_10	85.8346666563108	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	NA	False	NA	24	True	ATTAAA	-16	NA	134525319	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.107	chr1	+	4290	20	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	38888	3339	11082	424	3prime_fragment	FALSE	canonical	3	725	junction_9	83.8845665102643	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTGTTGGTGCTT	NA	False	NA	5	True	ATTAAA	-15	NA	134526796	134559684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.108	chr1	+	5105	20	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	11198	1361	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	216.454008856705	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	NA	False	NA	24	True	ATTAAA	-16	NA	134526912	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541630_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.109	chr1	+	5020	1	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	11355	-2440	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	904	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAAAACCATGTTTCTG	NA	False	NA	NA	False	AGTAAA	-18	NA	134527069	134532089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134527100_134532100
ES.1400.111	chr1	+	3812	18	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	14602	425	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_17	216.671086814996	1184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	134530316	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134559044
ES.1400.112	chr1	+	4787	17	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	44269	2405	16463	1358	3prime_fragment	FALSE	canonical	3	725	junction_6	80.9435567231883	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTGGTCTGCAGTG	NA	False	NA	21	True	ATTAAA	-13	NA	134532177	134560618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.114	chr1	+	3653	15	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-14164	669	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_14	230.24110033987	1178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	1465	False	NA	7	True	AATAAA	-17	NA	134535453	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134559044
ES.1400.116	chr1	+	6193	13	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-12960	669	intron_retention	FALSE	canonical	3	725	junction_3	87.5618828791006	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	2669	False	NA	7	True	AATAAA	-17	NA	134536657	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.117	chr1	+	4453	13	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	52684	2410	-9025	1353	3prime_fragment	FALSE	canonical	3	725	junction_2	85.933234742638	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAACCCAGTGGTCTG	6604	False	NA	16	True	ATTAAA	-8	NA	134540592	134560613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.118	chr1	+	3193	13	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	53016	3338	-8693	425	3prime_fragment	FALSE	canonical	3	725	junction_2	85.933234742638	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	70	False	NA	6	True	ATTAAA	-16	NA	134540924	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.119	chr1	+	2265	8	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	59387	3338	-2322	425	3prime_fragment	FALSE	canonical	3	763	junction_2	88.3926767674927	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	6441	False	NA	6	True	ATTAAA	-16	NA	134547295	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.12	chr1	+	5410	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-33	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.459072596701	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	6682	False	NA	9	True	ATTAAA	-19	NA	134487875	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541112_134541630_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.121	chr1	+	2996	7	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-1037	1358	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	346.486651979553	1177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTGGTCTGCAGTG	7726	False	NA	21	True	ATTAAA	-13	NA	134548580	134560618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134548761_134549672_134549832_134552448_134552930_134555058_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.122	chr1	+	5333	1	FSM	ENSMUSG00000042207.18	ENSMUST00000191572.2	4402	1	-905	-26	15	26	mono-exon	FALSE	NA	NA	NA	NA	NA	1126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGCCTCCTACTAAGG	8778	False	NA	NA	False	NA	NA	NA	134549632	134554965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134549600_134555000
ES.1400.123	chr1	+	4463	5	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	62790	2410	161	1353	3prime_fragment	FALSE	canonical	3	850	junction_3	87.0786282620483	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAACCCAGTGGTCTG	9844	False	NA	16	True	ATTAAA	-8	NA	134550698	134560613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.124	chr1	+	3211	5	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	63550	2902	921	861	3prime_fragment	FALSE	canonical	3	850	junction_3	87.0786282620483	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGTCCTTTAAGCCA	NA	False	NA	10	True	AATAAA	-22	NA	134551458	134560121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.125	chr1	+	5515	4	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	64640	-9	2011	9	intron_retention	FALSE	canonical	3	850	junction_3	37.8182789431542	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGTAAATCCATTTT	NA	False	NA	NA	False	AAGAAA	-33	NA	134552548	134563032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.126	chr1	+	2581	4	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	2336	425	intron_retention	FALSE	canonical	3	850	junction_2	92.4662100445346	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	134552873	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134552935_134555002_134556491_134558170_134558492_134558974
ES.1400.127	chr1	+	2155	1	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	7429	861	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGTCCTTTAAGCCA	NA	False	NA	10	True	AATAAA	-22	NA	134557966	134560121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134558000_134560100
ES.1400.128	chr1	+	1968	2	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	70260	2404	7631	1359	3prime_fragment	FALSE	canonical	3	1075	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGTGGTCTGCAGTGT	NA	False	NA	22	True	ATTAAA	-14	NA	134558168	134560619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134558492_134558974
ES.1400.15	chr1	+	8746	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-23	-9	-23	9	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGTAAATCCATTTT	6692	False	NA	NA	False	AAGAAA	-33	NA	134487885	134563032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.16	chr1	+	6505	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-18	1358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	256.46696039675	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTGGTCTGCAGTG	6697	False	NA	21	True	ATTAAA	-13	NA	134487890	134560618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134527063_134528299_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.17	chr1	+	5622	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-12	669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.64061223071	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6703	False	NA	7	True	AATAAA	-17	NA	134487896	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544032_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.18	chr1	+	5484	28	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-12	668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.864852605623	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAGACTACAGCTTC	6703	False	NA	6	True	AATAAA	-16	NA	134487896	134559928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558248_134558394_134558492_134558974
ES.1400.19	chr1	+	8005	26	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-9	428	intron_retention	FALSE	canonical	0	0	junction_3	197.852284293106	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	6706	False	NA	9	True	ATTAAA	-19	NA	134487899	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.2	chr1	+	6394	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-78	2398	-78	1365	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGCAGTGTCCTGCA	6637	False	NA	28	True	ATTAAA	-20	NA	134487830	134560625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.20	chr1	+	5796	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-9	857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	294.993343120158	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCCAGTCCTTTAA	6706	False	NA	6	True	AATAAA	-18	NA	134487899	134560117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549826_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.22	chr1	+	6672	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-7	2049	-7	1714	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTTCCCTCTGGGTCTT	6708	False	NA	NA	False	NA	NA	NA	134487901	134560974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.23	chr1	+	4422	24	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	-28	3920	-7	401	5prime_fragment	FALSE	canonical	0	0	junction_3	201.856234752624	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATTTATTTTGACTA	6708	False	NA	NA	False	TATAAA	-15	NA	134487901	134555340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002
ES.1400.27	chr1	+	4764	26	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-4	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	304.969202379519	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGCTACAGGACTGGG	6711	False	NA	7	True	AATAAA	-19	NA	134487904	134559175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521075_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552950_134556335_134556491_134558170_134558492_134558974
ES.1400.28	chr1	+	6106	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	-22	-671	-1	671	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGACTACAGCTTCTTC	6714	False	NA	9	True	AATAAA	-19	NA	134487907	134559931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.29	chr1	+	5617	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	1	669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.459072596701	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6716	False	NA	7	True	AATAAA	-17	NA	134487909	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541112_134541630_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.3	chr1	+	6354	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-57	1361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.226236735055	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	6658	False	NA	24	True	ATTAAA	-16	NA	134487851	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.31	chr1	+	7520	26	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	9	1357	intron_retention	FALSE	canonical	0	0	junction_3	198.017574977576	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCCAGTGGTCTGCAGT	6724	False	NA	20	True	ATTAAA	-12	NA	134487917	134560617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134556491_134558170_134558492_134558974
ES.1400.34	chr1	+	4854	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	12	3848	-9	-85	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGCTACAGGACTGGG	6727	False	NA	7	True	AATAAA	-19	NA	134487920	134559175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.35	chr1	+	6230	24	NNC	ENSMUSG00000042207.18	novel	5413	26	NA	NA	-9	669	intron_retention	FALSE	non_canonical	0	0	junction_3	267.004676296992	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6727	False	NA	7	True	AATAAA	-17	NA	134487920	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552797_134557626
ES.1400.37	chr1	+	5375	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	1	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.881132259012	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	6737	False	NA	9	True	ATTAAA	-19	NA	134487930	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134554984_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.38	chr1	+	5561	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	4	671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.901388644257	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGACTACAGCTTCTTC	6740	False	NA	9	True	AATAAA	-19	NA	134487933	134559931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515695_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.40	chr1	+	4891	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	5	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	251.439230014993	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTAATTTTTTTCCTT	6741	False	NA	16	True	AAAAAG	-29	NA	134487934	134559296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134559044
ES.1400.41	chr1	+	6989	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	26	1699	5	-1699	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGTTTGTTTGTATG	6741	False	NA	NA	False	NA	NA	NA	134487934	134561324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.42	chr1	+	4714	22	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	5	8280	5	-1859	5prime_fragment	FALSE	canonical	0	0	junction_3	210.258322922724	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAAGTCTGTTTTTTG	6741	False	NA	NA	False	TATAAA	-45	NA	134487934	134550980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672
ES.1400.44	chr1	+	5321	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	5	87	5	-87	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAAAGCTACAGGACTG	6741	False	NA	5	True	AATAAA	-17	NA	134487934	134559173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.46	chr1	+	5582	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-4	669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.59793163763	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6747	False	NA	7	True	AATAAA	-17	NA	134487940	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525326_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.5	chr1	+	5077	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-45	3682	-45	81	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGCTGACTGTTTTT	6670	False	NA	61	True	NA	NA	NA	134487863	134559341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.51	chr1	+	4818	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	2	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	299.386495468047	1174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAAAGCTACAGGACTG	6753	False	NA	5	True	AATAAA	-17	NA	134487946	134559173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528496_134530195_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548584_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.53	chr1	+	5566	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	2	668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.226236735055	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAGACTACAGCTTC	6753	False	NA	6	True	AATAAA	-16	NA	134487946	134559928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.54	chr1	+	4899	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	2	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.746352360228	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTTTGTAATTTTTT	6753	False	NA	11	True	AAAAAG	-24	NA	134487946	134559291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533569_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.55	chr1	+	5479	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	2	671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.65469630633	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGACTACAGCTTCTTC	6753	False	NA	9	True	AATAAA	-19	NA	134487946	134559931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556386_134558170_134558492_134558974
ES.1400.56	chr1	+	6258	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	17	-862	2	862	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGTCCTTTAAGCCAT	6753	False	NA	11	True	AATAAA	-23	NA	134487946	134560122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.57	chr1	+	5824	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	17	-428	2	428	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	6753	False	NA	9	True	ATTAAA	-19	NA	134487946	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.6	chr1	+	5858	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-39	2895	-39	868	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTAAGCCATGTTCTT	6676	False	NA	17	True	AATAAA	-29	NA	134487869	134560128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.62	chr1	+	5522	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	16	669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	299.932874640212	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6767	False	NA	7	True	AATAAA	-17	NA	134487960	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515695_134515782_134516514_134516686_134521075_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.63	chr1	+	5309	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	16	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.226236735055	1184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	6767	False	NA	6	True	ATTAAA	-16	NA	134487960	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.65	chr1	+	5211	25	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	16	860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	299.056569225995	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCAGTCCTTTAAGCC	6767	False	NA	9	True	AATAAA	-21	NA	134487960	134560120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528415_134533565_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.67	chr1	+	3210	10	NNC	ENSMUSG00000042207.18	novel	5413	26	NA	NA	17	-2440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	306.533304335217	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAAAACCATGTTTCTG	6768	False	NA	NA	False	AGTAAA	-18	NA	134487961	134532089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516518_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187
ES.1400.68	chr1	+	5441	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	32	-60	17	60	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGGTTGTTGAAG	6768	False	NA	40	True	ACTAAA	-39	NA	134487961	134559320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.7	chr1	+	6276	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-34	1361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	251.439230014993	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	6681	False	NA	24	True	ATTAAA	-16	NA	134487874	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134559044
ES.1400.71	chr1	+	2390	12	ISM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	33	25072	18	-341	5prime_fragment	FALSE	canonical	0	0	junction_3	283.369775650238	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATAAATTTATAAAG	6769	False	NA	NA	False	TATAAA	-13	NA	134487962	134534188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450
ES.1400.72	chr1	+	4818	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.65469630633	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACACTTTTTTGTAAT	6769	False	NA	6	True	AAAAAG	-19	NA	134487962	134559286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556386_134558170_134558492_134558974
ES.1400.74	chr1	+	5557	27	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	669	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	254.218890098356	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAGACTACAGCTTCT	6769	False	NA	7	True	AATAAA	-17	NA	134487962	134559929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521075_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.75	chr1	+	5286	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.901388644257	1184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	6769	False	NA	6	True	ATTAAA	-16	NA	134487962	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515695_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.77	chr1	+	5330	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	252.323665652908	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTGTTGGTGCTT	6769	False	NA	5	True	ATTAAA	-15	NA	134487962	134559684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558501_134558974
ES.1400.79	chr1	+	5317	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	194.173731152858	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	6769	False	NA	6	True	ATTAAA	-16	NA	134487962	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515767_134516503_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.8	chr1	+	5417	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	-33	3330	-33	433	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTGCTTTAGCATTTG	6682	False	NA	14	True	ATTAAA	-24	NA	134487875	134559693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.80	chr1	+	4499	17	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	1358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	313.13912143806	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTGGTCTGCAGTG	6769	False	NA	21	True	ATTAAA	-13	NA	134487962	134560618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526916_134545632_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.81	chr1	+	6213	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	1361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.746352360228	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	6769	False	NA	24	True	ATTAAA	-16	NA	134487962	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533569_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.82	chr1	+	6248	27	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	18	1360	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	254.218890098356	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGGTCTGCAGTGTC	6769	False	NA	23	True	ATTAAA	-15	NA	134487962	134560620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521075_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.9	chr1	+	7684	26	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	-33	83	intron_retention	FALSE	canonical	0	0	junction_3	197.852284293106	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTGACTGTTTTTTG	6682	False	NA	63	True	NA	NA	NA	134487875	134559343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.90	chr1	+	7087	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	36	-1710	21	1710	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGAGTTCCCTCTGGG	6772	False	NA	NA	False	NA	NA	NA	134487965	134560970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ES.1400.93	chr1	+	5183	26	NIC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	45	425	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	260.821011423543	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGTTGGTGCTTT	6796	False	NA	6	True	ATTAAA	-16	NA	134487989	134559685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134556335_134556491_134558170_134558492_134558974
ES.1400.96	chr1	+	5135	27	NNC	ENSMUSG00000042207.18	novel	605	2	NA	NA	623	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.662350433751	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTGGTGCTTTAGC	7374	False	NA	9	True	ATTAAA	-19	NA	134488567	134559688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134488696_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.97	chr1	+	5377	27	NNC	ENSMUSG00000042207.18	novel	605	2	NA	NA	10860	670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.662350433751	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGACTACAGCTTCTT	3803	False	NA	8	True	AATAAA	-18	NA	134498804	134559930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134498933_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.98	chr1	+	6043	27	NNC	ENSMUSG00000042207.18	novel	605	2	NA	NA	10869	1357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.662350433751	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCCAGTGGTCTGCAGT	3812	False	NA	20	True	ATTAAA	-12	NA	134498813	134560617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134498921_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.1400.99	chr1	+	5942	26	ISM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	24981	2402	-2825	1361	3prime_fragment	FALSE	canonical	0	0	junction_2	197.923597380403	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCTGCAGTGTCC	NA	False	NA	24	True	ATTAAA	-16	NA	134512889	134560621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ES.14000.1	chr16	+	179	1	Intergenic	novelGene_11736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	90053007	90053186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90053000_90053200
ES.14001.1	chr16	+	176	1	Intergenic	novelGene_11737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	90060425	90060601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90060400_90060600
ES.14002.1	chr16	+	274	1	Intergenic	novelGene_11738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90061618	90061892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90061600_90061900
ES.14003.1	chr16	+	1735	1	Intergenic	novelGene_11739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90066823	90068558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90066800_90068600
ES.14004.1	chr16	-	4952	2	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-497	11161	intron_retention	TRUE	non_canonical	0	0	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90040455	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90035513
ES.14004.10	chr16	-	8757	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-55	-4436	23	1061	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACTTTAAGAGTCCAC	NA	False	NA	-5	True	AATAAA	-13	NA	90081368	90021506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.11	chr16	-	4780	21	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-36	1055	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	72.864857784806	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATCACTTTAAGA	NA	False	NA	-11	True	AATAAA	-7	NA	90081349	90021512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90022689_90026643_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.12	chr16	-	4690	21	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-27	1055	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	62.6713650720965	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATCACTTTAAGA	NA	False	NA	-11	True	AATAAA	-7	NA	90081340	90021512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90022689_90026643_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.13	chr16	-	4117	18	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-1502	1055	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.2634015429885	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATCACTTTAAGA	NA	False	NA	-11	True	AATAAA	-7	NA	90057190	90021512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90022689_90026643_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90054999_90055593_90055735_90057028
ES.14004.14	chr16	-	8541	19	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-10	301	intron_retention	FALSE	canonical	3	105	junction_2	47.6780936834093	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAACAATTTATGTGAC	NA	False	NA	NA	False	AATAAA	-23	NA	90081323	90022266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.15	chr16	-	4923	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	13	500	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTTGCCTGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	90081378	90025338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.16	chr16	-	4401	20	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	44.5324743781235	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTGCTATTCTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	90081408	90025836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.18	chr16	-	4368	20	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	64.0141518287092	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081335	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047302_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.19	chr16	-	4445	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-75	-104	3	0	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081388	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.2	chr16	-	4707	21	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	19	11161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.0273900589438	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081372	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90035513_90037151_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.21	chr16	-	4471	20	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_2	45.9499908819345	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081426	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.22	chr16	-	4250	19	NNC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.8185871722708	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081361	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.23	chr16	-	4185	19	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	65.6683586922449	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081356	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.25	chr16	-	4306	20	NNC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	71.9564734545973	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081348	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047302_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.26	chr16	-	4360	20	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	64.904276414986	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081324	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054282_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.28	chr16	-	4349	20	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.6923382466409	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081340	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039583_90039771_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.29	chr16	-	4327	20	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.2839528404857	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081372	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060041_90080890
ES.14004.3	chr16	-	4425	21	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	35	11161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.864857784806	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081356	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011424_90025846_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.31	chr16	-	4428	20	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_14	73.2668253770492	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081374	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.32	chr16	-	4209	19	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	65.9695964389732	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081368	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.33	chr16	-	4385	20	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.591956131383	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081349	90025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044078_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.37	chr16	-	4451	21	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.0067595678174	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081349	90025840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90038840_90038954_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.38	chr16	-	4297	19	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	73.015832039326	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTAATGTGTGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	90081326	90025840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.39	chr16	-	4297	20	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	76.9084068687644	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081314	90025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060066_90080890
ES.14004.4	chr16	-	4387	21	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-7	11161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.6713650720965	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081398	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90025838_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.40	chr16	-	4355	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-183	3	12	-3	multi-exon	FALSE	canonical	3	110	junction_9	44.050650776067	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081379	90025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.41	chr16	-	3741	18	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	79.2277170052786	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081317	90025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047083_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.42	chr16	-	4992	19	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	30	-3	intron_retention	FALSE	canonical	3	105	junction_2	47.2078736370675	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081361	90025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.43	chr16	-	4388	20	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	65.7405712987151	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTAATGTGTGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	90081340	90025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080896
ES.14004.44	chr16	-	4331	20	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_14	62.6087087833032	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGTTAATGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	90081363	90025843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.46	chr16	-	2634	10	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	78.8669766125214	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGTTAATGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	90081276	90025843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045438_90080943
ES.14004.47	chr16	-	3690	14	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	71.6535880915292	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	90081368	90025844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90080890
ES.14004.5	chr16	-	4438	22	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	19	11161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.8916534811987	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081372	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90035513_90036819_90037130_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.53	chr16	-	5533	18	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-10	0	intron_retention	FALSE	canonical	3	36	junction_10	62.5567700650286	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	90081323	90025844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.54	chr16	-	4364	20	NNC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	63.719216129478	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	90081349	90025844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047302_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.55	chr16	-	4202	19	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	76.0126086032223	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	90081310	90025844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.56	chr16	-	3954	19	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	64.9001369627043	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAAACGTTAATGTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	90081363	90025845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.58	chr16	-	4280	20	NNC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	82.35663275322	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAACAAACGTTAATGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	90081337	90025847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047302_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.59	chr16	-	4021	19	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	22	-18	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	66.4479746368039	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTCTATTTTCGTAA	NA	False	NA	NA	False	NA	NA	NA	90081369	90025862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.6	chr16	-	4701	21	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-10	11161	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.1710715634678	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081323	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90035513_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.60	chr16	-	4182	20	NNC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.8841142648285	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTGCTCTCTATTTT	NA	False	NA	NA	False	TTTAAA	-33	NA	90081314	90025942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045407_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.61	chr16	-	6950	19	ISM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-167	9674	28	3713	5prime_fragment	FALSE	canonical	3	110	junction_8	43.9576465630045	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTTACCTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	90081363	90035512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.62	chr16	-	6858	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-27	3713	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	63.7995041618815	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTTACCTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	90081340	90035512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.63	chr16	-	11410	14	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	23	3713	intron_retention	FALSE	canonical	3	110	junction_6	50.6820930528034	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTTACCTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	90081368	90035512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.64	chr16	-	8136	17	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	22	3713	intron_retention	FALSE	canonical	3	106	junction_8	47.1745429230639	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTTACCTATCT	NA	False	NA	NA	False	AATAAA	-18	NA	90081369	90035512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.65	chr16	-	4788	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	23	3686	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	64.1851546077608	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081368	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.66	chr16	-	7127	18	NIC	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-35	3686	intron_retention	FALSE	canonical	3	110	junction_7	39.2691008776242	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081348	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.67	chr16	-	6900	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-27	3686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.2507916146465	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081340	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.69	chr16	-	7881	19	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	19	3686	intron_retention	TRUE	canonical	0	0	junction_1	74.6670180216601	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081372	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038680_90039541_90039759_90039847_90039931_90040098_90041097_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.7	chr16	-	7060	21	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-27	11161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.9152343883202	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAACAATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	90081340	90011406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90011417_90035513_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90053696_90053821_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.70	chr16	-	4568	5	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	38955	9597	1746	3686	internal_fragment	FALSE	canonical	3	105	junction_1	59.9140008679107	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90042358	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268
ES.14004.71	chr16	-	4650	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-6	3686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.2028858971048	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081319	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044158_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.72	chr16	-	4730	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	10	3686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.3718487387754	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081381	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049149_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.73	chr16	-	7438	19	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	35	3686	intron_retention	FALSE	canonical	0	0	junction_1	65.7925096115633	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAAAAGTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	90081356	90035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.74	chr16	-	4277	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-10	3664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1046149824633	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGTTACTTTGGTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	90081323	90035561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90036819_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.75	chr16	-	4805	6	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-67	3658	intron_retention	FALSE	canonical	0	0	junction_1	95.2331874925963	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTTTGGGTTACTTT	8194	False	NA	NA	False	ATTAAA	-15	NA	90044171	90035567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057
ES.14004.76	chr16	-	3477	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	8	2426	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	62.9607009291975	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTGCACCACTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	90081383	90036799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.78	chr16	-	5638	19	ISM	ENSMUSG00000022983.17	ENSMUST00000232371.2	4367	20	55	10956	-23	2425	5prime_fragment	FALSE	canonical	3	36	junction_9	58.7768588459988	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACAGTTGCACCACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	90081336	90036800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.79	chr16	-	3489	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-27	2424	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	73.3017139924997	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGTTGCACCACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081340	90036801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.8	chr16	-	210	1	Intergenic	novelGene_11735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATCCTTCCCTTCACT	NA	False	NA	NA	False	NA	NA	NA	90014016	90013806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90013800_90014000
ES.14004.80	chr16	-	3429	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-36	2424	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	62.648781361605	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGTTGCACCACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081349	90036801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90037197_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.81	chr16	-	5533	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-2	2419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5780611270838	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATCACAGTTGCACC	NA	False	NA	NA	False	AATAAA	-14	NA	90081315	90036806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.82	chr16	-	4552	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	24	1763	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	83.7687094081094	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGAATAGTCTAGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	90081367	90037462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038954_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054285_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.83	chr16	-	4594	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-36	1440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.7995041618815	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTTAAAGTTTAATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	90081349	90037785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038614_90038682_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.84	chr16	-	2455	6	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	37173	11860	-36	1423	internal_fragment	FALSE	canonical	3	105	junction_1	53.7304383008365	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCTGTAA	8225	False	NA	NA	False	NA	NA	NA	90044140	90037802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057
ES.14004.85	chr16	-	3335	16	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-1722	414	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	45.2186785398345	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAATTCACATTTGAT	NA	False	NA	NA	False	AATAAA	-22	NA	90057410	90038811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028
ES.14004.86	chr16	-	3238	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-27	407	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.9814377927861	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACCAAGAATAATTCAC	NA	False	NA	NA	False	AATAAA	-15	NA	90081340	90038818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038954_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.87	chr16	-	3233	20	NNC	ENSMUSG00000022983.17	novel	429	3	NA	NA	-35	406	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.6830328358381	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTACCAAGAATAATTCA	NA	False	NA	NA	False	AATAAA	-14	NA	90081348	90038819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90038954_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.88	chr16	-	3592	19	NNC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	14	10	intron_retention	FALSE	non_canonical	0	0	junction_5	97.3384067678261	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTGTATACATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	90081377	90039215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044540_90044634_90045400_90045592_90046526_90046601_90046948_90047326_90048762_90048872_90049144_90049339_90053696_90053821_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.89	chr16	-	3331	19	ISM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	-56	13273	22	10	5prime_fragment	FALSE	canonical	3	105	junction_1	46.5087274432989	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTGTATACATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	90081369	90039215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.9	chr16	-	10205	18	NNC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	23	1064	intron_retention	FALSE	canonical	0	0	junction_13	80.1432109168042	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTAAGAGTCCACATT	NA	False	NA	-2	True	AATAAA	-16	NA	90081368	90021503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90027133_90039414_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90053696_90053821_90054140_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.90	chr16	-	3269	19	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	18	10	combination_of_known_junctions	FALSE	canonical	3	106	junction_8	44.4794653689337	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTGTATACATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	90081373	90039215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.91	chr16	-	3252	19	ISM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	-172	13377	23	10	5prime_fragment	FALSE	canonical	3	110	junction_8	43.9576465630045	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTGTATACATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	90081368	90039215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ES.14004.93	chr16	-	2120	12	NIC	ENSMUSG00000022983.17	novel	4266	20	NA	NA	-5236	5	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	52.1471218194215	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATTTGGTGTATACA	3025	False	NA	NA	False	AATAAA	-15	NA	90049340	90039220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144
ES.14004.94	chr16	-	6838	1	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	27	-19954	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGAACTGTATACAC	NA	False	NA	NA	False	NA	NA	NA	90081364	90074526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90074500_90081400
ES.14004.95	chr16	-	5241	2	Genic_Genomic	ENSMUSG00000022983.17	novel	4175	20	NA	NA	-25	-19954	multi-exon	FALSE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGAACTGTATACAC	NA	False	NA	NA	False	NA	NA	NA	90081338	90074526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_90078616_90080186
ES.14004.96	chr16	-	5697	2	Genic_Genomic	ENSMUSG00000022983.17	novel	4175	20	NA	NA	39	-19963	multi-exon	FALSE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAAAAAGAAATTTGAAC	NA	False	NA	NA	False	NA	NA	NA	90081274	90074535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_90078617_90079658
ES.14005.1	chr16	+	1515	1	Intergenic	novelGene_11740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	90081504	90083019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90081500_90083000
ES.14005.2	chr16	+	2197	1	Intergenic	novelGene_11741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTGCTGAGGATGT	NA	False	NA	NA	False	NA	NA	NA	90081506	90083703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90081500_90083700
ES.14006.1	chr16	-	180	1	Intergenic	novelGene_11742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATGTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90089852	90089672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90089700_90089900
ES.14007.1	chr16	-	250	1	Intergenic	novelGene_11743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCCCGCCCCTAGGTG	NA	False	NA	NA	False	NA	NA	NA	90094039	90093789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90093800_90094000
ES.14008.1	chr16	-	189	1	Intergenic	novelGene_11744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATGTATATGAGTACA	NA	False	NA	NA	False	NA	NA	NA	90097269	90097080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90097100_90097300
ES.14009.1	chr16	-	185	1	Intergenic	novelGene_11745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATTACTC	NA	False	NA	NA	False	NA	NA	NA	90106511	90106326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90106300_90106500
ES.1401.1	chr1	-	2319	15	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTTCCTCCGACGACGT	8590	False	NA	NA	False	NA	NA	NA	134541085	134487934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134488280_134512890_134512968_134515657_134515781_134516512_134516685_134521065_134521200_134523535_134523634_134525319_134525430_134526796_134526957_134528371_134528492_134530187_134530345_134532177_134532359_134533446_134533614_134535425_134535544_134536600_134536797_134540924
ES.1401.3	chr1	-	174	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTATGAACCA	NA	False	NA	NA	False	NA	NA	NA	134495146	134494972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134495000_134495100
ES.1401.4	chr1	-	4360	1	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTTACAGAACAGAAACCA	2456	False	NA	NA	False	NA	NA	NA	134538265	134533905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134533900_134538300
ES.1401.5	chr1	-	180	2	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	4788	False	NA	NA	False	NA	NA	NA	134544887	134533928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134533953_134544731
ES.1401.6	chr1	-	5154	1	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGCACTGCTCTATCC	8589	False	NA	NA	False	NA	NA	NA	134541086	134535932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134535900_134541100
ES.1401.7	chr1	-	1009	2	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAAAAAAAAAAGGCA	8590	False	NA	NA	False	AATAAA	-30	NA	134541085	134535948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134536797_134540924
ES.1401.8	chr1	-	403	1	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAACTAAAT	8591	False	NA	NA	False	NA	NA	NA	134541084	134540681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134540700_134541100
ES.1401.9	chr1	-	216	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAGCAGGCTCCCTCCC	4785	False	NA	NA	False	NA	NA	NA	134544890	134544674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134544700_134544900
ES.14010.1	chr16	+	177	1	Intergenic	novelGene_11746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90109212	90109389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90109200_90109400
ES.14011.1	chr16	-	177	1	Intergenic	novelGene_11747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	90119594	90119417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90119400_90119600
ES.14012.1	chr16	+	5643	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	-246	-4	-246	4	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTGTTTATTGATG	NA	False	NA	13	True	AATACA	-19	NA	90182654	90296445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.10	chr16	+	4962	11	NNC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	473	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.7221070181787	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90183373	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90183605_90229401_90229728_90244188_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.11	chr16	+	4805	11	NNC	ENSMUSG00000053414.9	novel	3446	4	NA	NA	16457	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	39.338149422666	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90213888	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90214005_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.12	chr16	+	4008	5	ISM	ENSMUSG00000053414.9	ENSMUST00000231719.2	3068	11	75208	-1695	13855	0	3prime_fragment	FALSE	canonical	3	109	junction_1	10.1365674663566	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90272639	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.2	chr16	+	5564	10	NIC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	-227	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	40.8411557133243	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90182673	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_90183605_90229401_90229695_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.3	chr16	+	2160	1	Genic_Genomic	ENSMUSG00000053414.9	novel	NA	NA	NA	NA	-227	-94079	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCCACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90182673	90184833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_90182700_90184800
ES.14012.5	chr16	+	3491	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	-100	2002	-100	-307	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGACAGGGTCTCA	NA	False	NA	NA	False	ATTAAA	-11	NA	90182800	90294439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.6	chr16	+	5404	10	NIC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	-95	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	42.0196896821913	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90182805	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90284746_90284795_90290300_90290482_90292977
ES.14012.8	chr16	+	5516	11	NNC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	40.6811995889993	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90182813	90296441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278101_90278222_90284746_90284795_90290300_90290482_90292977
ES.14012.9	chr16	+	2797	5	ISM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	-77	33882	-77	-16353	5prime_fragment	FALSE	canonical	3	95	junction_1	21.4403241579972	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGCACACATTTGCC	NA	False	NA	NA	False	TATAAA	-32	NA	90182823	90262559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028
ES.14013.1	chr16	-	1336	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	-3	0	-3	0	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-25	NA	90524295	90516199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ES.14013.2	chr16	-	2848	3	FSM	ENSMUSG00000022978.12	ENSMUST00000147546.2	493	3	-223	-2132	42	-3	multi-exon	FALSE	canonical	3	279	junction_2	16	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTGTTTGGTTTTTTT	NA	False	NA	-3	True	AATAAA	-22	NA	90524250	90516202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90518647_90523180_90523248_90523913
ES.14013.3	chr16	-	2162	4	NIC	ENSMUSG00000022978.12	novel	1333	5	NA	NA	45	-11	intron_retention	FALSE	canonical	3	276	junction_1	15.8394724940223	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACGTTCATTTGTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	90524247	90516210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90516867_90517541_90518647_90523180_90523248_90523913
ES.14013.4	chr16	-	1947	4	NIC	ENSMUSG00000022978.12	novel	1333	5	NA	NA	50	-11	intron_retention	FALSE	canonical	3	279	junction_3	14.0554457615387	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACGTTCATTTGTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	90524242	90516210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90517639_90518523_90518647_90523180_90523248_90523913
ES.14013.5	chr16	-	1946	4	ISM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	42	11	42	-11	intron_retention	FALSE	canonical	3	276	junction_1	14.9740516301441	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACGTTCATTTGTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	90524250	90516210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180
ES.14013.6	chr16	-	883	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	42	408	42	-408	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTGTTTGTATGTA	NA	False	NA	NA	False	ATTAAA	-35	NA	90524250	90516607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ES.14014.1	chr16	-	223	1	Intergenic	novelGene_11748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AATAAA	-37	NA	90529383	90529160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90529200_90529400
ES.14015.1	chr16	-	175	1	Intergenic	novelGene_11749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	90536772	90536597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90536600_90536800
ES.14016.1	chr16	+	1669	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	267	206	13	-16	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGTCTTGCAATCCT	NA	False	NA	NA	False	AATAAA	-12	NA	90628013	90701567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ES.14016.2	chr16	+	2429	6	NNC	ENSMUSG00000039903.19	novel	1937	7	NA	NA	23070	-5586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.70613704707484	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90666355	90695997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_90666578_90672719_90672806_90672926_90673080_90687417_90687562_90691465_90691544_90694251
ES.14017.11	chr16	-	3415	17	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-642	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.4322187412852	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGTACTTTGTT	NA	False	NA	-11	True	AATAAA	-15	NA	90570321	90548415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551965_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151
ES.14017.12	chr16	-	7296	39	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	27.3863933904464	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGTACTTTGTT	8681	False	NA	-11	True	AATAAA	-15	NA	90607278	90548415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573136_90574241_90574461_90575935_90576130_90577078_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.13	chr16	-	7737	26	NIC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-16247	-1	intron_retention	FALSE	canonical	3	66	junction_14	17.1157938758329	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGTACTTTGTT	NA	False	NA	-11	True	AATAAA	-15	NA	90585926	90548415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90549067_90550210_90550811_90551698_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822
ES.14017.17	chr16	-	7283	39	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	21.941940512694	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTTTGTACTTTG	8677	False	NA	-13	True	AATAAA	-13	NA	90607282	90548417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559256_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.18	chr16	-	4587	8	NIC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	6038	-3	intron_retention	FALSE	canonical	3	89	junction_7	13.5721804303013	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTTTGTACTTTG	NA	False	NA	-13	True	AATAAA	-13	NA	90563641	90548417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90550811_90551698_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542
ES.14017.2	chr16	-	3345	8	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	11110	0	intron_retention	FALSE	canonical	0	0	junction_4	53.1693482359595	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	90558569	90548414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90553160_90554630_90554741_90556359_90556572_90556686_90556831_90557278_90557386_90558510
ES.14017.20	chr16	-	7255	38	NIC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	22.2303828048322	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTGCTTTTGTACTT	8653	False	NA	-15	True	AATAAA	-11	NA	90607306	90548419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.22	chr16	-	7186	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	-30	188	-9	-188	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTCTTCGGTTGT	8649	False	NA	NA	False	ATTAAA	-15	NA	90607310	90548602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.3	chr16	-	7296	39	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	22.373250252697	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8680	False	NA	-10	True	AATAAA	-16	NA	90607279	90548414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90553008_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.5	chr16	-	7289	39	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	22.1420746124667	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8677	False	NA	-10	True	AATAAA	-16	NA	90607282	90548414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573136_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.6	chr16	-	8373	38	NIC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-8	0	intron_retention	FALSE	canonical	3	66	junction_15	15.6039833089476	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8671	False	NA	-10	True	AATAAA	-16	NA	90607288	90548414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90549067_90550210_90550811_90551698_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.7	chr16	-	7334	39	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	22.4821874705867	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8653	False	NA	-10	True	AATAAA	-16	NA	90607306	90548414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589734_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ES.14017.8	chr16	-	7485	41	NNC	ENSMUSG00000039929.15	novel	7344	39	NA	NA	-34054	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	27.0704636088856	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTGTACTTTGTT	NA	False	NA	-11	True	AATAAA	-15	NA	90641355	90548415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086_90607281_90628106_90628227_90641333
ES.14018.1	chr16	-	2283	1	Intergenic	novelGene_11750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGTATCCAGCGACCTC	NA	False	NA	NA	False	TTTAAA	-29	NA	90683867	90681584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90681600_90683900
ES.14019.1	chr16	-	157	1	Intergenic	novelGene_11751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	90702921	90702764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90702800_90702900
ES.1402.1	chr1	-	170	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	134603724	134603554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134603600_134603700
ES.14020.1	chr16	+	104	1	Intergenic	novelGene_11752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACATAAATAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	90718907	90719011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90718900_90719000
ES.14021.1	chr16	+	2148	3	Genic_Genomic	ENSMUSG00000116836.2	novel	2579	1	NA	NA	-686	902	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTAGATTAGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	90721733	90725900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_90721807_90722420_90722656_90724060
ES.14021.2	chr16	+	8457	3	Genic_Genomic	ENSMUSG00000116836.2_ENSMUSG00000116607.2	novel	2579	1	NA	NA	-639	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGGGTCCAGACTGATT	NA	False	NA	NA	False	NA	NA	NA	90721780	90732518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_90721807_90724034_90729002_90729054
ES.14022.1	chr16	-	3006	8	NNC	ENSMUSG00000022972.11	novel	1430	7	NA	NA	32	4622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.926371661761	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGGCTCTTGGTCCCAA	NA	False	NA	NA	False	AATAAA	-28	NA	90731682	90718074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90720138_90722863_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ES.14022.2	chr16	-	2607	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	340	-1517	-51	1517	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTCTGCCCATTTG	NA	False	NA	NA	False	NA	NA	NA	90731662	90721179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ES.14022.3	chr16	-	1171	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	234	25	47	-25	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGTCACATCTAAGGA	NA	False	NA	-23	True	AATAAA	-30	NA	90731768	90722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ES.14022.4	chr16	-	4653	4	NIC	ENSMUSG00000022972.11	novel	1014	6	NA	NA	1	-25	intron_retention	FALSE	canonical	3	732	junction_1	18.624953392932	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGTCACATCTAAGGA	NA	False	NA	-23	True	AATAAA	-30	NA	90731713	90722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90722971_90723232_90723329_90723985_90728050_90731469
ES.14022.5	chr16	-	4543	5	NIC	ENSMUSG00000022972.11	novel	1014	6	NA	NA	-24	-40	intron_retention	FALSE	canonical	3	732	junction_1	17.2825779327044	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTTAGGACAGCTG	NA	False	NA	-38	True	AATAAA	-15	NA	90731738	90722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90728050_90731469
ES.14022.7	chr16	-	1017	6	FSM	ENSMUSG00000022972.11	ENSMUST00000125519.8	1014	6	113	-116	12	-45	multi-exon	FALSE	canonical	3	9	junction_4	296.303493060747	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAATGTTTTAGGAC	NA	False	NA	-43	True	AATAAA	-10	NA	90731702	90722741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90727881_90728050_90731469
ES.14022.9	chr16	-	861	5	NIC	ENSMUSG00000022972.11	novel	1014	6	NA	NA	0	-45	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	322.624394613923	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAATGTTTTAGGAC	NA	False	NA	-43	True	AATAAA	-10	NA	90731714	90722741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90731469
ES.14023.1	chr16	+	3801	2	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCCCTCCTGCAGTAAC	7054	False	NA	NA	False	NA	NA	NA	90754373	90758870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90757566_90758261
ES.14023.2	chr16	+	4496	1	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTCCCTCCTGCAGTAA	7054	False	NA	NA	False	NA	NA	NA	90754373	90758869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90754400_90758900
ES.14023.3	chr16	+	3674	3	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTCCCTCCTGCAGTAA	7054	False	NA	NA	False	NA	NA	NA	90754373	90758869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90757326_90757451_90757566_90758261
ES.14023.4	chr16	+	5664	9	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAGATGCTGAGTGAT	7054	False	NA	NA	False	NA	NA	NA	90754373	90772439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90757347_90757446_90757566_90758261_90758418_90760701_90760864_90761099_90761293_90761391_90761534_90764187_90764273_90766070_90766263_90770797
ES.14023.5	chr16	+	3700	3	Antisense	novelGene_ENSMUSG00000022973.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCCCTCCTGCAGTAAC	7055	False	NA	NA	False	NA	NA	NA	90754374	90758870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_90757347_90757446_90757566_90758261
ES.14024.1	chr16	+	174	1	Intergenic	novelGene_11753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	90779234	90779408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90779200_90779400
ES.14025.1	chr16	+	206	1	Intergenic	novelGene_11754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAAAAGTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	90781690	90781896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90781700_90781900
ES.14026.1	chr16	-	6846	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-7	15	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGAGGTTTTTTTTTCT	2439	False	NA	4	True	AATAAA	-37	NA	90807958	90732964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.11	chr16	-	6780	29	NNC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	44	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4358321032607	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGACTTCTTTACTCA	2492	False	NA	-19	True	AATAAA	-14	NA	90807905	90732987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90735923_90737360_90737382_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747365_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776807_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.12	chr16	-	6823	29	NIC	ENSMUSG00000022973.19	novel	6910	33	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	16.4673455477121	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGACTTCTTTACTC	2366	False	NA	-20	True	AATAAA	-13	NA	90808031	90732988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.13	chr16	-	6903	30	NNC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.2092501865717	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCAGCTGACTTCTTTA	2446	False	NA	-23	True	AATAAA	-10	NA	90807951	90732991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761388_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.14	chr16	-	6486	27	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	890	-235	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.0073937163521	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACATCGTGTGTATTTGC	3338	False	NA	NA	False	NA	NA	NA	90807059	90733228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911
ES.14026.15	chr16	-	4763	23	NNC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-16474	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	15.0149374659849	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACAGTTCTGACAATGTC	NA	False	NA	NA	False	TATAAA	-29	NA	90782707	90734567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90782278
ES.14026.16	chr16	-	5228	28	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-63	976	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTTCTGACAATGT	2333	False	NA	NA	False	TATAAA	-28	NA	90808064	90734568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.17	chr16	-	5228	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	0	969	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTACCTAACAGTTCTG	2446	False	NA	NA	False	TATAAA	-21	NA	90807951	90734575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.18	chr16	-	4942	30	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-40	626	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	17.5631356440248	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTCTACTTTTTCTCT	2356	False	NA	NA	False	NA	NA	NA	90808041	90734918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.19	chr16	-	4900	29	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-38	625	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	16.4673455477121	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTTCTACTTTTTCTC	2358	False	NA	NA	False	NA	NA	NA	90808039	90734919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.2	chr16	-	6821	29	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-30	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	14.7490487413769	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTTTACTCAAAAGGG	2366	False	NA	-13	True	AATAAA	-20	NA	90808031	90732981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.20	chr16	-	5123	28	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-116	623	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTTCTACTTTTTC	2085	False	NA	NA	False	NA	NA	NA	90808312	90734921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.21	chr16	-	4922	30	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	45	623	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	18.1651166399941	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTTCTACTTTTTC	2493	False	NA	NA	False	NA	NA	NA	90807904	90734921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90744953_90745002_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.22	chr16	-	4891	29	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-40	623	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	14.7490487413769	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGTTCTACTTTTTC	2356	False	NA	NA	False	NA	NA	NA	90808041	90734921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.24	chr16	-	4886	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-5	622	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGAGTTCTACTTTTT	2441	False	NA	NA	False	NA	NA	NA	90807956	90734922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.26	chr16	-	6915	27	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-1	535	intron_retention	FALSE	canonical	3	22	junction_26	11.7440656045118	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTGATATTTATATAAAA	2447	False	NA	NA	False	AATAAA	-13	NA	90807950	90735009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.27	chr16	-	2530	5	ISM	ENSMUSG00000022973.19	ENSMUST00000121759.8	7090	32	63074	2034	-1579	531	intron_retention	FALSE	canonical	3	13	junction_4	16.8430252627015	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCACTGATATTTATAT	4541	False	NA	NA	False	AATAAA	-9	NA	90745122	90735013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902
ES.14026.28	chr16	-	4909	24	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-41	-4384	intron_retention	FALSE	canonical	3	37	junction_13	9.4744707220582	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTATTATCAAACCAGTA	2355	False	NA	NA	False	AATAAA	-23	NA	90808042	90745780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.29	chr16	-	4329	24	NNC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-41	-4966	intron_retention	FALSE	non_canonical	0	0	junction_14	14.302034965654	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCAAATTCTTGCCT	2355	False	NA	NA	False	AATAAA	-23	NA	90808042	90746362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773642_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.3	chr16	-	6857	29	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	15.5596285565024	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTTCTTTACTCAAAA	2447	False	NA	-16	True	AATAAA	-17	NA	90807950	90732984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.31	chr16	-	3341	2	Genic_Genomic	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-1616	6614	multi-exon	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	90753914	90750517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_90750875_90750930
ES.14026.32	chr16	-	3841	20	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-28	990	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	9.62078774252418	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACATTT	2368	False	NA	NA	False	NA	NA	NA	90808029	90756141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.33	chr16	-	2615	18	ISM	ENSMUSG00000022973.19	ENSMUST00000118246.3	2743	19	931	0	931	0	3prime_fragment	FALSE	canonical	3	37	junction_8	9.17835576412638	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACGCATCTCCATTCCT	3379	False	NA	NA	False	AATAAA	-17	NA	90807018	90757379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911
ES.14026.34	chr16	-	2556	1	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	5971	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTAATACTGGCTGCT	NA	False	NA	NA	False	NA	NA	NA	90760262	90757706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90757700_90760300
ES.14026.35	chr16	-	5453	6	ISM	ENSMUSG00000022973.19	ENSMUST00000118246.3	2743	19	34729	1066	-6987	-1066	internal_fragment	FALSE	canonical	3	44	junction_1	7.67854152818099	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTTTGTGTATGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	90773220	90758445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797
ES.14026.36	chr16	-	2669	4	ISM	ENSMUSG00000022973.19	ENSMUST00000130813.3	2224	16	32897	2410	-8853	-2410	internal_fragment	FALSE	canonical	3	37	junction_3	10.6770782520313	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGCCTCCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	90775086	90763561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90764273_90766070_90766263_90770797_90770964_90773486
ES.14026.37	chr16	-	6690	12	NIC	ENSMUSG00000022973.19	novel	2224	16	NA	NA	17	-4569	intron_retention	FALSE	canonical	3	22	junction_11	13.0997444931237	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGGTAGAGGTGAGTAT	2465	False	NA	NA	False	NA	NA	NA	90807932	90765720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.38	chr16	-	3298	2	ISM	ENSMUSG00000022973.19	ENSMUST00000130813.3	2224	16	34430	4569	-7320	-4569	intron_retention	FALSE	canonical	3	61	junction_1	0	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGGTAGAGGTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	90773553	90765720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90766263_90770797
ES.14026.4	chr16	-	6792	28	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	-43	4	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTTCTTTACTCAAAA	2353	False	NA	-16	True	AATAAA	-17	NA	90808044	90732984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ES.14026.5	chr16	-	5515	4	ISM	ENSMUSG00000022973.19	ENSMUST00000121759.8	7090	32	62269	6	1380	3	intron_retention	FALSE	canonical	3	33	junction_1	9.7410927974683	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	3736	False	NA	-17	True	AATAAA	-16	NA	90745927	90732985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679
ES.14026.8	chr16	-	6881	29	NNC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	25	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4541308484115	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	2473	False	NA	-17	True	AATAAA	-16	NA	90807924	90732985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90735923_90736521_90736612_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
ES.14026.9	chr16	-	3563	1	NIC	ENSMUSG00000022973.19	novel	7090	32	NA	NA	5210	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGACTTCTTTACTCAA	NA	False	NA	-18	True	AATAAA	-15	NA	90736549	90732986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90733000_90736500
ES.14027.1	chr16	+	258	2	Intergenic	novelGene_11755	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAACAAACAAACAAACA	9780	False	NA	NA	False	NA	NA	NA	90826300	90842342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_90826422_90842205
ES.14028.1	chr16	-	3942	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	31	0	31	0	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841400	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.10	chr16	-	4929	10	ISM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	14555	1	526	-1	3prime_fragment	FALSE	canonical	3	305	junction_4	23.8083915074673	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTTGTATCTTGCTG	NA	False	NA	-1	True	ATTAAA	-17	NA	90826876	90810925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117
ES.14028.11	chr16	-	4132	18	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	107.29569787278	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	-2	True	ATTAAA	-16	NA	90841277	90810926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831389_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.12	chr16	-	4445	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	38	-2	intron_retention	FALSE	canonical	3	98	junction_10	90.7771137181614	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	-2	True	ATTAAA	-16	NA	90841393	90810926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.13	chr16	-	3603	1	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	1590	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	-2	True	ATTAAA	-16	NA	90814529	90810926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90810900_90814500
ES.14028.14	chr16	-	3671	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-62	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	107.835233110519	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTTGTATCTTGCT	NA	False	NA	-2	True	ATTAAA	-16	NA	90841304	90810926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.17	chr16	-	7472	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	55	-4	intron_retention	FALSE	canonical	3	97	junction_10	92.6235450290583	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTTTTGTTGTATCTTG	NA	False	NA	-4	True	ATTAAA	-14	NA	90841376	90810928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.19	chr16	-	3684	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-257	-695	-67	-184	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGTATTCTGTAAT	NA	False	NA	NA	False	AATAAA	-40	NA	90841309	90811108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.2	chr16	-	8012	16	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	31	0	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841400	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.20	chr16	-	3727	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	51	195	51	-195	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATTTACTATCCATGG	NA	False	NA	NA	False	AATAAA	-29	NA	90841380	90811119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.21	chr16	-	4210	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	91	-201	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCCAGGCAATTTACTAT	NA	False	NA	NA	False	AATAAA	-23	NA	90841340	90811125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.22	chr16	-	7686	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-39	-207	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACACACCCAGGCAATT	NA	False	NA	NA	False	AATAAA	-17	NA	90841281	90811131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.23	chr16	-	3215	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	30	728	30	151	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTGCGTGTCTGTGT	NA	False	NA	NA	False	TATAAA	-25	NA	90841401	90811652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.24	chr16	-	3727	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	39	143	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATAATTTTGCGT	NA	False	NA	NA	False	ATTAAA	-45	NA	90841392	90811660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.25	chr16	-	7243	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	48	127	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGTGTTTAGTGTAAG	NA	False	NA	NA	False	ATTAAA	-29	NA	90841383	90811676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.26	chr16	-	6672	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	87	124	intron_retention	FALSE	canonical	3	98	junction_10	92.5127524993176	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGAGTGTTTAGTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	90841344	90811679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.28	chr16	-	3593	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	84	121	intron_retention	FALSE	canonical	0	0	junction_3	107.567529177412	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATGATGAGTGTTTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	90841347	90811682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.29	chr16	-	6725	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	39	112	intron_retention	FALSE	canonical	3	97	junction_10	92.6235450290583	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGCTCTATAAATGATG	NA	False	NA	NA	False	ATTAAA	-14	NA	90841392	90811691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.3	chr16	-	6045	10	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	2037	0	intron_retention	FALSE	canonical	3	97	junction_9	80.0388794413204	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90829743	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90824034_90824117_90824218_90827303
ES.14028.30	chr16	-	3583	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	55	32	intron_retention	FALSE	canonical	3	98	junction_10	90.7771137181614	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTATGGATGTTTCTTTA	NA	False	NA	39	True	AATGAA	-23	NA	90841376	90811771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.31	chr16	-	3610	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	38	25	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGAGTCTATGGATGT	NA	False	NA	32	True	AATGAA	-16	NA	90841393	90811778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.32	chr16	-	3084	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	33	856	33	23	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAGGAGTCTATGGAT	NA	False	NA	30	True	AATGAA	-14	NA	90841398	90811780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.33	chr16	-	7069	16	NNC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	57	-24	intron_retention	FALSE	non_canonical	0	0	junction_14	108.955566886486	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTCCTTAAATGTGAT	NA	False	NA	-17	True	AATATA	-37	NA	90841374	90811827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90831906_90832806_90832911_90833355_90833578_90834129_90834310_90839440_90839570_90840893
ES.14028.35	chr16	-	7100	16	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	39	-25	intron_retention	FALSE	canonical	3	97	junction_10	88.458402025409	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCCTTAAATGTGA	NA	False	NA	-18	True	AATATA	-36	NA	90841392	90811828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.36	chr16	-	6553	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	55	-27	intron_retention	FALSE	canonical	3	98	junction_10	92.5127524993176	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841376	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.37	chr16	-	3022	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-317	27	62	-27	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841369	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.38	chr16	-	4514	9	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	-678	-27	intron_retention	FALSE	canonical	3	305	junction_3	24.9599679486974	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90825204	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117
ES.14028.39	chr16	-	8321	15	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-39	-27	intron_retention	FALSE	canonical	3	97	junction_9	90.0798965091659	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841281	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.4	chr16	-	4785	17	ISM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	150	-879	150	0	intron_retention	FALSE	canonical	3	97	junction_10	95.4402422657759	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90840902	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440
ES.14028.40	chr16	-	7600	15	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	89	-27	intron_retention	FALSE	canonical	3	97	junction_10	89.2028186614238	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841342	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831906_90832806_90832911_90833355_90834307_90839440_90839570_90840893
ES.14028.41	chr16	-	3121	19	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	39	-27	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	116.289774823047	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841392	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90824914_90824991_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.42	chr16	-	6475	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-39	-27	intron_retention	FALSE	canonical	3	97	junction_10	92.6235450290583	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841281	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.43	chr16	-	4654	10	ISM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	13546	27	-104	-27	intron_retention	FALSE	canonical	3	305	junction_4	23.8083915074673	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90827506	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117
ES.14028.44	chr16	-	3358	17	Fusion	ENSMUSG00000022974.13_ENSMUSG00000039851.12	novel	2732	18	NA	NA	-186	-27	intron_retention	FALSE	canonical	0	0	junction_16	110.060139810015	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90866219	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90865919
ES.14028.45	chr16	-	7154	17	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	59	-27	intron_retention	FALSE	canonical	1	2	junction_11	117.365198605677	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841372	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90824914_90824991_90827303_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.46	chr16	-	3093	19	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	49	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	118.944963411603	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90841382	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90814452_90814528_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.48	chr16	-	1990	13	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	97	-27	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	117.185631466585	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCGTGTCCTTAAATGT	NA	False	NA	-20	True	AATATA	-34	NA	90831683	90811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831389
ES.14028.49	chr16	-	6324	2	NNC	ENSMUSG00000022974.13	novel	296	3	NA	NA	-2381	-28	intron_retention	TRUE	non_canonical	0	0	junction_1	0	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACCGTGTCCTTAAATG	NA	False	NA	-21	True	AATATA	-33	NA	90818500	90811831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90815394_90815738
ES.14028.5	chr16	-	3953	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	-342	-879	37	0	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841394	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.50	chr16	-	2787	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	-58	-29	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	105.872546459174	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCGTGTCCTTAAAT	NA	False	NA	-22	True	AATATA	-32	NA	90841300	90811832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.51	chr16	-	7544	11	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	154	-29	intron_retention	FALSE	non_canonical	0	0	junction_2	120.87634177125	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCGTGTCCTTAAAT	NA	False	NA	-22	True	AATATA	-32	NA	90831626	90811832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90815383_90815686_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303
ES.14028.52	chr16	-	3425	16	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	85	-29	intron_retention	FALSE	canonical	0	0	junction_3	107.482505036349	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCGTGTCCTTAAAT	NA	False	NA	-22	True	AATATA	-32	NA	90841346	90811832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.54	chr16	-	4041	6	NIC	ENSMUSG00000022974.13	novel	1415	8	NA	NA	43	-540	intron_retention	FALSE	canonical	3	169	junction_4	10.0399203184089	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGGAGAGGCTAAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	90841388	90828991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.55	chr16	-	2397	6	NIC	ENSMUSG00000022974.13	novel	1415	8	NA	NA	62	-2165	intron_retention	FALSE	canonical	3	169	junction_4	10.0399203184089	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGACAAGTTTTTGCT	NA	False	NA	NA	False	TATAAA	-8	NA	90841369	90830616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.7	chr16	-	7938	16	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	88	0	intron_retention	FALSE	canonical	3	98	junction_10	88.3277734099278	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841343	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.8	chr16	-	4471	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	31	0	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841400	90810924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ES.14028.9	chr16	-	3362	17	NNC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	-2490	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	121.498826511823	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTTGTATCTTGCTG	NA	False	NA	-1	True	ATTAAA	-17	NA	90834270	90810925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90824914_90824991_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129
ES.14029.1	chr16	-	1586	3	NNC	ENSMUSG00000116763.2	novel	2155	3	NA	NA	-40888	-19846	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGAAATTGTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	90996865	90955188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90956570_90985997_90986132_90996794
ES.14029.2	chr16	-	1796	4	NNC	ENSMUSG00000116763.2	novel	2155	3	NA	NA	-40865	-19848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAGAAATTGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	90996842	90955190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_90956570_90956752_90956988_90985997_90986132_90996794
ES.14029.3	chr16	-	3395	2	Intergenic	novelGene_11756	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCGTTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	90996846	90993261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_90994729_90994918
ES.1403.1	chr1	+	6284	5	ISM	ENSMUSG00000026452.16	ENSMUST00000121990.2	6879	9	34639	0	-4638	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGGCGGGGAGCATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	134671676	134680887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134671866_134672121_134672290_134673467_134673586_134674491_134674626_134675212
ES.14030.1	chr16	+	91	1	Intergenic	novelGene_11757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	1784	False	NA	NA	False	NA	NA	NA	91045342	91045433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91045300_91045400
ES.14031.1	chr16	+	1743	1	Intergenic	novelGene_11758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	2566	False	NA	4	True	NA	NA	NA	91050849	91052592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91050800_91052600
ES.14032.1	chr16	+	2212	1	FSM	ENSMUSG00000046160.7	ENSMUST00000056882.7	2162	1	-46	-4	-46	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTTCGTCTGTTTGT	2371	False	NA	NA	False	AATAAA	-20	NA	91066613	91068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91066600_91068800
ES.14033.1	chr16	+	300	1	Intergenic	novelGene_11759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAGAGATATG	NA	False	NA	NA	False	NA	NA	NA	91133314	91133614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91133300_91133600
ES.14034.1	chr16	+	179	1	Intergenic	novelGene_11760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAGAGAGGGCCCTG	NA	False	NA	31	True	NA	NA	NA	91168937	91169116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91168900_91169100
ES.14035.2	chr16	+	1617	8	NNC	ENSMUSG00000022971.19	novel	2580	8	NA	NA	11	1508	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.3202798303199	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTCTCAGGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	91169681	91192436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91191847
ES.14035.3	chr16	+	1155	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	-54	-2	13	2	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTCTGTCTCTAATGT	NA	False	NA	10	True	AATAAA	-22	NA	91169683	91190930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ES.14035.4	chr16	+	3023	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	20	4	20	-4	multi-exon	FALSE	canonical	1	3	junction_7	21.683807322516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTATAGTCTTTTTG	NA	False	NA	5	True	AATACA	-17	NA	91169690	91202473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
ES.14036.1	chr16	+	1811	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	32	7	32	5	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTAGGGGGTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	91203154	91222715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ES.14037.1	chr16	+	181	1	Intergenic	novelGene_11761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAGAGAGA	9311	False	NA	NA	False	NA	NA	NA	91234882	91235063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91234900_91235100
ES.14038.1	chr16	-	820	1	Intergenic	novelGene_11762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	91281843	91281023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91281000_91281800
ES.14039.1	chr16	+	4099	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	-161	-29	-161	29	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCCCCTTTCCTGATT	NA	False	NA	53	True	NA	NA	NA	91281964	91304358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.10	chr16	+	5919	12	NNC	ENSMUSG00000022967.14	novel	2771	12	NA	NA	5	3082	intron_retention	FALSE	canonical	0	0	junction_11	50.2529140637717	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGTTGATTGATAATA	NA	False	NA	NA	False	AATAAA	-22	NA	91282130	91307411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942_91305570_91306636
ES.14039.15	chr16	+	2094	6	NNC	ENSMUSG00000022967.14	novel	468	2	NA	NA	3782	-220	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	62.6143753462414	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGAGTTTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	91293318	91303334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91293396_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.16	chr16	+	4185	5	ISM	ENSMUSG00000022967.14	ENSMUST00000117748.8	2771	12	12963	4	5578	0	intron_retention	FALSE	canonical	3	157	junction_1	5.78791845139511	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGATATTTTCTTTA	NA	False	NA	20	True	NA	NA	NA	91295114	91304325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.17	chr16	+	5720	4	NIC	ENSMUSG00000022967.14	novel	3433	13	NA	NA	5675	0	intron_retention	FALSE	canonical	3	157	junction_1	6.68331255192114	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGATATTTTCTTTA	NA	False	NA	20	True	NA	NA	NA	91295211	91304325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91296492_91296743_91298658_91300272_91300416_91301942
ES.14039.18	chr16	+	4024	2	ISM	ENSMUSG00000022967.14	ENSMUST00000117748.8	2771	12	16623	4	-3417	0	intron_retention	FALSE	canonical	3	162	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGATATTTTCTTTA	NA	False	NA	20	True	NA	NA	NA	91298774	91304325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91300416_91301942
ES.14039.19	chr16	+	2230	4	NNC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	-1884	7819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACAGGTTTTCTTTGT	NA	False	NA	NA	False	TATAAA	-14	NA	91300307	91312148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91300416_91307481_91307621_91309220_91309340_91310284
ES.14039.2	chr16	+	5931	12	NNC	ENSMUSG00000022967.14	novel	2771	12	NA	NA	-5	3082	intron_retention	FALSE	non_canonical	0	0	junction_11	50.2529140637717	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGTTGATTGATAATA	NA	False	NA	NA	False	AATAAA	-22	NA	91282120	91307411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942_91305563_91306627
ES.14039.3	chr16	+	3870	11	NNC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	-3	1	intron_retention	FALSE	non_canonical	0	0	junction_1	66.8849758914511	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGATATTTTCTTTAT	NA	False	NA	21	True	NA	NA	NA	91282122	91304326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91282305_91286616_91286702_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.5	chr16	+	3729	10	NIC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	-1	2	intron_retention	FALSE	canonical	3	7	junction_2	50.8296598551245	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATATTTTCTTTATT	NA	False	NA	22	True	NA	NA	NA	91282124	91304327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91282305_91286583_91286708_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.6	chr16	+	6988	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	3	-3082	3	3082	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGTTGATTGATAATA	NA	False	NA	NA	False	AATAAA	-22	NA	91282128	91307411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.14039.7	chr16	+	2907	11	NNC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	4	-218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	52.6228087429776	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGTTTTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	91282129	91303336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298514_91298658_91300272_91300416_91301942
ES.14039.9	chr16	+	2428	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	4	1477	4	-702	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTCCGGCACTATTC	NA	False	NA	NA	False	TATAAA	-17	NA	91282129	91302852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ES.1404.1	chr1	+	165	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTTAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	134853614	134853779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134853600_134853800
ES.14040.1	chr16	-	176	1	Intergenic	novelGene_11763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTCCAG	NA	False	NA	NA	False	NA	NA	NA	91284798	91284622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91284600_91284800
ES.14041.1	chr16	-	1391	3	Antisense	novelGene_ENSMUSG00000022967.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCACTGTGCTGATG	NA	False	NA	NA	False	NA	NA	NA	91293267	91289183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91290172_91291858_91292210_91293215
ES.14041.2	chr16	-	1003	4	Antisense	novelGene_ENSMUSG00000022967.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	7.36357401145817	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATACATGGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	91293264	91289475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91290172_91291858_91291955_91292087_91292210_91293175
ES.14042.1	chr16	+	2103	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	-18	1623	-18	-1169	multi-exon	FALSE	canonical	3	18	junction_6	4.14996653266291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTGTATCTAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	91343941	91360888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
ES.14042.2	chr16	+	3888	1	Genic_Genomic	ENSMUSG00000022965.9	novel	NA	NA	NA	NA	-12	-9702	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCACATTTAAGATGTG	NA	False	NA	NA	False	AAAAAG	-5	NA	91343947	91347835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_91343900_91347800
ES.14042.3	chr16	+	1318	3	FSM	ENSMUSG00000022965.9	ENSMUST00000130404.2	2516	3	1	1197	1	-1197	multi-exon	FALSE	canonical	0	0	junction_1	9	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAAATAAATA	3362	False	NA	NA	False	NA	NA	NA	91358211	91360860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91358270_91358507_91358666_91359758
ES.14043.1	chr16	+	158	1	Intergenic	novelGene_11764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	4211	False	NA	NA	False	NA	NA	NA	91381753	91381911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91381800_91381900
ES.14044.1	chr16	+	171	1	Intergenic	novelGene_11765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGTAGAACT	1029	False	NA	NA	False	NA	NA	NA	91392854	91393025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91392900_91393000
ES.14045.1	chr16	-	2278	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	69	0	-67	0	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394619	91371390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ES.14045.2	chr16	-	2246	7	NNC	ENSMUSG00000022964.15	novel	2347	7	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	32.5358776327508	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394595	91371390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394477
ES.14045.3	chr16	-	2356	8	NNC	ENSMUSG00000022964.15	novel	2347	7	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0912374590784	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAATCTGAGTCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	91394555	91371391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91373047_91374437_91374581_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ES.14045.5	chr16	-	2073	6	NIC	ENSMUSG00000022964.15	novel	2347	7	NA	NA	22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	35.8251308441435	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACATGGAATCTGAGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	91394530	91371393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91383829_91383970_91394469
ES.14045.6	chr16	-	5577	5	ISM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	10818	5	10682	-5	intron_retention	FALSE	canonical	3	77	junction_3	5.76085931090146	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGACATGGAATCTGAGT	NA	False	NA	-11	True	AATAAA	-19	NA	91383870	91371395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163
ES.14045.7	chr16	-	4018	6	NIC	ENSMUSG00000022964.15	novel	2347	7	NA	NA	3	-5	intron_retention	FALSE	canonical	3	77	junction_2	7.0427267446636	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGACATGGAATCTGAGT	NA	False	NA	-11	True	AATAAA	-19	NA	91394549	91371395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ES.14045.8	chr16	-	935	2	Genic_Genomic	ENSMUSG00000022964.15	novel	2347	7	NA	NA	-20	-13795	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTTCTGCATCTCATTT	NA	False	NA	NA	False	NA	NA	NA	91394572	91390884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_91391348_91394100
ES.14046.1	chr16	-	273	1	Intergenic	novelGene_11766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGTTGAATAGTCCAC	9289	False	NA	NA	False	NA	NA	NA	91397606	91397333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91397300_91397600
ES.14046.2	chr16	-	158	1	Intergenic	novelGene_11767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	9289	False	NA	NA	False	NA	NA	NA	91397606	91397448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91397400_91397600
ES.14047.1	chr16	+	2446	1	Antisense	novelGene_ENSMUSG00000022962.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAACTGAAACAATTCT	NA	False	NA	NA	False	NA	NA	NA	91439982	91442428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_91440000_91442400
ES.14048.1	chr16	+	1199	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-780	9276	-406	-9276	5prime_fragment	FALSE	canonical	3	478	junction_2	6	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACCAGAAGAATCTGAG	NA	False	NA	NA	False	NA	NA	NA	91443987	91451645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91444873_91448517_91448685_91451498
ES.14048.10	chr16	+	8289	13	NNC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-26	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	127.877871424262	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAATGTTGTGTCTTA	NA	False	NA	6	True	AATACA	-10	NA	91444740	91476075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91454355_91454429_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.11	chr16	+	8244	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	349	138	-24	9	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTATGTTAATTTTTTA	NA	False	NA	38	True	AATAAA	-35	NA	91444742	91475957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.12	chr16	+	3482	11	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	132.738992010637	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGGAAGTTTATGTT	NA	False	NA	29	True	AATAAA	-26	NA	91444745	91475948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91452827_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.13	chr16	+	12323	11	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	185	junction_10	92.593952286313	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATGGAACACATATAAC	NA	False	NA	35	True	AATAAA	-22	NA	91444745	91476104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.14	chr16	+	8301	13	FSM	ENSMUSG00000022961.19	ENSMUST00000140312.8	8426	13	-21	146	-21	-11	multi-exon	FALSE	canonical	2	9	junction_8	148.597400717509	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTATTTTGTTGACTGAGG	NA	False	NA	18	True	AATAAA	-42	NA	91444745	91475937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91471582_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.15	chr16	+	8457	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	-20	-38	-20	12	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGCACTATTTGTTTC	NA	False	NA	52	True	AATAAA	-39	NA	91444746	91476121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.16	chr16	+	7471	8	NNC	ENSMUSG00000022961.19	novel	7529	7	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	181.881212636721	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACTTGTTGTGCAAAA	NA	False	NA	2	True	AATAAA	-13	NA	91444746	91462590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91455344_91455415_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ES.14048.17	chr16	+	2236	1	NIC	ENSMUSG00000022961.19	novel	8731	12	NA	NA	-20	-13939	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTGAGAGCATTAGA	NA	False	NA	NA	False	NA	NA	NA	91444746	91446982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444700_91447000
ES.14048.18	chr16	+	8021	10	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-19	0	intron_retention	FALSE	canonical	1	3	junction_3	139.385246398535	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444747	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91453298_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.19	chr16	+	8293	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	-18	124	-18	11	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTTAATTTTTTAGG	NA	False	NA	40	True	AATAAA	-37	NA	91444748	91475959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.2	chr16	+	7153	6	NNC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	-34	-715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.25429538084	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGAGAGAGATGTTAC	NA	False	NA	23	True	AATAAA	-14	NA	91444732	91460206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91452116_91452227_91457469_91458988_91459150_91459379
ES.14048.20	chr16	+	3609	11	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	132.738992010637	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444753	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91452827_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.21	chr16	+	12139	11	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-9	-16	intron_retention	FALSE	canonical	3	185	junction_10	92.593952286313	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCGCTATTTTGTTGAC	NA	False	NA	13	True	AATAAA	-37	NA	91444757	91475932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.22	chr16	+	7817	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	-9	591	-9	103	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTACTATGATGTAAC	NA	False	NA	NA	False	NA	NA	NA	91444757	91475492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.23	chr16	+	7035	6	NNC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	-9	-725	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	202.25429538084	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACATTTATGGAGA	NA	False	NA	13	True	AATAAA	-4	NA	91444757	91460196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91454269_91454463_91457469_91458988_91459150_91459379
ES.14048.24	chr16	+	11182	13	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	6	junction_8	149.066260434748	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444757	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91468835_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.25	chr16	+	9826	13	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.024607481852	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444757	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91451940_91452227_91457469_91458988_91459150_91459379_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.26	chr16	+	4020	11	NNC	ENSMUSG00000022961.19	novel	8731	12	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	132.004696886134	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTGTCTTATTCTCT	NA	False	NA	12	True	AATACA	-16	NA	91444758	91476081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91453298_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.27	chr16	+	8882	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	367	-518	-6	504	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTGCATGTAATAA	NA	False	NA	NA	False	AATAAA	-24	NA	91444760	91476613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.28	chr16	+	12337	11	NIC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	171	junction_10	95.0221026919527	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444763	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.29	chr16	+	4067	11	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	133.165160608922	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTCTTATTCTCTG	NA	False	NA	13	True	AATACA	-17	NA	91444765	91476082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91453298_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.3	chr16	+	7560	7	FSM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	-31	0	-31	0	multi-exon	FALSE	canonical	3	68	junction_6	146.545120090101	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	False	NA	8	True	AATAAA	-19	NA	91444735	91462596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ES.14048.30	chr16	+	7894	6	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	-1	-267	-1	267	intron_retention	FALSE	canonical	3	270	junction_5	84.8537565461895	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCAAATCAAACTTTTT	NA	False	NA	NA	False	AGTAAA	-42	NA	91444765	91462863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521
ES.14048.31	chr16	+	9230	7	NIC	ENSMUSG00000022961.19	novel	7529	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	167.664015883618	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGTTGTGCAAAATCA	NA	False	NA	5	True	AATAAA	-16	NA	91444768	91462593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379_91461233_91461521_91461711_91461807
ES.14048.32	chr16	+	7962	13	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.02153136417	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTTGTTGACTGAGGA	NA	False	NA	19	True	AATAAA	-43	NA	91444770	91475938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91451940_91452227_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.33	chr16	+	3322	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	4	6369	-1	-6369	5prime_fragment	FALSE	canonical	3	478	junction_2	6	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTACTCTGCAGCTGAT	NA	False	NA	NA	False	NA	NA	NA	91444771	91454552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91444873_91448517_91448685_91451498
ES.14048.35	chr16	+	9325	6	NIC	ENSMUSG00000022961.19	novel	7529	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	129	junction_4	139.724013684119	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	False	NA	8	True	AATAAA	-19	NA	91444773	91462596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379_91461233_91461521
ES.14048.36	chr16	+	10671	13	NNC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_8	150.84640827308	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	NA	False	NA	8	True	AATACA	-12	NA	91444775	91476077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91469375_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.37	chr16	+	3528	11	NNC	ENSMUSG00000022961.19	novel	8731	12	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	131.572641533109	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	NA	False	NA	8	True	AATACA	-12	NA	91444775	91476077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91452827_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.38	chr16	+	8469	13	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	149.444225010165	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444776	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91471582_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.39	chr16	+	1958	4	NIC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	206.718810626093	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCCATTGTGTGTTT	NA	False	NA	4	True	NA	NA	NA	91444784	91460921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91458988_91459150_91459379
ES.14048.4	chr16	+	7657	6	ISM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	-31	0	-31	0	intron_retention	FALSE	canonical	3	270	junction_5	84.8537565461895	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	False	NA	8	True	AATAAA	-19	NA	91444735	91462596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521
ES.14048.41	chr16	+	7713	6	NNC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	78	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	202.25429538084	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCATTGTGTGTTTAA	NA	False	NA	6	True	NA	NA	NA	91444850	91460923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448685_91451498_91454309_91454459_91457469_91458988_91459150_91459379
ES.14048.42	chr16	+	8121	10	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	6731	6	-5333	-3	3prime_fragment	FALSE	canonical	3	171	junction_9	68.3299908848303	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	NA	False	NA	8	True	AATACA	-12	NA	91451497	91476077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.43	chr16	+	6933	12	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-4166	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	144.780997337643	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTTGTTGACTGAGGA	NA	False	NA	19	True	AATAAA	-43	NA	91452664	91475938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91470872_91470911_91471582_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.44	chr16	+	5795	4	NNC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	-3532	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	181.520124381721	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGCAGCCATTGTGTG	NA	False	NA	1	True	NA	NA	NA	91453298	91460918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91454370_91454444_91457469_91458988_91459150_91459379
ES.14048.45	chr16	+	6428	3	ISM	ENSMUSG00000022961.19	ENSMUST00000122302.8	2449	11	9166	13518	-2892	-5	internal_fragment	FALSE	canonical	3	270	junction_2	34	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTTGTTGTGCAAAAT	NA	False	NA	3	True	AATAAA	-14	NA	91453938	91462591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91459150_91461085_91461233_91461521
ES.14048.46	chr16	+	3853	5	NNC	ENSMUSG00000022961.19	novel	7529	7	NA	NA	-1932	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170.589236178605	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACTTGTTGTGCAAAA	NA	False	NA	2	True	AATAAA	-13	NA	91454898	91462590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91457469_91458988_91459150_91461082_91461233_91461521_91461711_91461807
ES.14048.47	chr16	+	4377	10	NNC	ENSMUSG00000022961.19	novel	8399	12	NA	NA	-1707	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	115.735116900406	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGTTGACTGAGGAAG	NA	False	NA	21	True	AATAAA	-45	NA	91455123	91475940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468217_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.48	chr16	+	3327	15	NNC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-908	-78	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	157.246670254484	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAACATCTCCAGGCTTT	NA	False	NA	NA	False	AAAAAG	-8	NA	91455922	91475311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91468835_91468893_91469088_91469230_91469375_91469457_91470872_91470911_91471582_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.49	chr16	+	4391	10	NIC	ENSMUSG00000022961.19	novel	8731	12	NA	NA	48	-5	combination_of_known_junctions	FALSE	canonical	3	129	junction_2	82.3026633533917	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAATGTTGTGTCTTA	NA	False	NA	6	True	AATACA	-10	NA	91456878	91476075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91457469_91458988_91459150_91459379_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.5	chr16	+	11686	12	NIC	ENSMUSG00000022961.19	novel	8426	13	NA	NA	-31	0	intron_retention	FALSE	canonical	3	18	junction_8	128.210054916992	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444735	91476083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.50	chr16	+	3216	10	ISM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	12171	-529	107	503	3prime_fragment	FALSE	canonical	3	171	junction_9	68.3299908848303	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTATTGCATGTAATA	NA	False	NA	NA	False	AATAAA	-23	NA	91456937	91476612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.51	chr16	+	5284	11	NIC	ENSMUSG00000022961.19	novel	5547	11	NA	NA	206	4	intron_retention	FALSE	canonical	3	6	junction_6	132.240084694468	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAAGTTTATGTTAATT	NA	False	NA	33	True	AATAAA	-30	NA	91457036	91475952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91468835_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.52	chr16	+	3284	2	NIC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	582	5	intron_retention	FALSE	canonical	3	129	junction_1	0	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATTGTGTGTTTAAATA	NA	False	NA	9	True	NA	NA	NA	91457412	91460926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91459150_91459379
ES.14048.53	chr16	+	2341	8	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	16160	145	-554	2	3prime_fragment	FALSE	canonical	3	185	junction_7	45.7785262911308	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGAAGTTTATGTTAA	1821	False	NA	31	True	AATAAA	-28	NA	91460553	91475950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.54	chr16	+	2467	8	ISM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	16690	-511	-24	497	3prime_fragment	FALSE	canonical	3	185	junction_7	45.7785262911308	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTAATGCTATTGCAT	2351	False	NA	NA	False	AATAAA	-17	NA	91461083	91476606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.55	chr16	+	3582	6	NIC	ENSMUSG00000022961.19	novel	598	7	NA	NA	-317	-3	intron_retention	FALSE	canonical	1	3	junction_1	138.206512147583	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	3654	False	NA	8	True	AATACA	-12	NA	91468833	91476077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91470911_91471582_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ES.14048.56	chr16	+	3453	5	ISM	ENSMUSG00000022961.19	ENSMUST00000140312.8	8426	13	24690	131	306	4	3prime_fragment	FALSE	canonical	3	18	junction_1	124.202455692309	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAAGTTTATGTTAATT	4277	False	NA	33	True	AATAAA	-30	NA	91469456	91475952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91471663_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.57	chr16	+	3776	4	NNC	ENSMUSG00000022961.19	novel	3808	5	NA	NA	-525	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	139.212866582878	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTGACTGAGGAAGT	4624	False	NA	22	True	AATAAA	-19	NA	91469803	91475941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91472437_91474290_91474365_91474476_91474593_91474988
ES.14048.6	chr16	+	8410	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	343	-22	-30	8	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACTAAGCACTATTTG	NA	False	NA	48	True	AATAAA	-35	NA	91444736	91476117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ES.14048.7	chr16	+	8045	5	NNC	ENSMUSG00000022961.19	novel	7945	5	NA	NA	-30	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204.666802388663	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATCTTACAATATTT	NA	False	NA	84	True	CATAAA	-14	NA	91444736	91461001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91444873_91448517_91448674_91451498_91457469_91458988_91459150_91459379
ES.14048.8	chr16	+	7982	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-31	-6	-30	6	multi-exon	FALSE	canonical	3	129	junction_4	147.892697588488	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGTGTGTTTAAATAA	NA	False	NA	10	True	NA	NA	NA	91444736	91460927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
ES.14048.9	chr16	+	7261	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-31	715	-30	-715	multi-exon	FALSE	canonical	3	129	junction_4	147.892697588488	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGAGAGAGATGTTAC	NA	False	NA	23	True	AATAAA	-14	NA	91444736	91460206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
ES.14049.1	chr16	+	2758	1	NIC	ENSMUSG00000085169.3	novel	877	5	NA	NA	112	-20173	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	608	False	NA	NA	False	NA	NA	NA	91485910	91488668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91485900_91488700
ES.1405.1	chr1	-	6281	7	NNC	ENSMUSG00000073557.13	novel	2671	13	NA	NA	-1	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	2.21108319357027	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGATTGATAGAACCTC	9706	False	NA	NA	False	AATAAA	-21	NA	134763559	134682400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705212_134762172_134762215_134763522
ES.1405.2	chr1	-	8999	26	NNC	ENSMUSG00000073557.13	novel	3621	25	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.14140141029187	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCCATGAGATTGATAG	NA	False	NA	NA	False	AATAAA	-15	NA	134883666	134682406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134684443_134684483_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705212_134762172_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800005_134800049_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ES.1405.3	chr1	-	8752	24	NNC	ENSMUSG00000073557.13	novel	8840	24	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.14590655291358	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTGTGTTTTACC	NA	False	NA	NA	False	TATAAA	-6	NA	134883666	134682427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134684443_134684483_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705212_134762172_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ES.1405.4	chr1	-	3007	18	ISM	ENSMUSG00000073557.13	ENSMUST00000086444.6	3137	24	-6	68121	-4	-1	5prime_fragment	FALSE	canonical	0	0	junction_16	2.12091251497882	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTGAGGCTGTTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	134883684	134761801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ES.1405.5	chr1	-	3210	16	NNC	ENSMUSG00000073557.13	novel	8840	24	NA	NA	8	-30566	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.04830553276496	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCTGGACTAATGGGG	NA	False	NA	NA	False	CATAAA	-16	NA	134883658	134792369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134793017_134793163_134793699_134797805_134797989_134800005_134800049_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ES.1405.6	chr1	-	4760	10	NNC	ENSMUSG00000073557.13	novel	3213	20	NA	NA	-45701	-31448	intron_retention	TRUE	non_canonical	0	0	junction_9	1.8324913891634	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTGTGATTACTTTG	NA	False	NA	NA	False	GATAAA	-20	NA	134819859	134793251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_134793699_134797805_134800049_134800544_134800671_134801676_134801760_134803702_134803904_134807370_134807484_134814160_134814301_134815012_134815093_134818493_134818757_134818795
ES.1405.7	chr1	-	3737	4	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	134868135	134863970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_134865179_134865388_134867249_134867349_134867740_134867856
ES.14050.1	chr16	+	1450	1	Antisense	novelGene_ENSMUSG00000058240.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	91503401	91504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_91503400_91504900
ES.14051.1	chr16	-	3381	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	-13	0	-13	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGGTCCATTGATCT	9236	False	NA	NA	False	AATAAA	-16	NA	91415900	91411141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91414268_91415645
ES.14051.101	chr16	-	3269	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	543.916014091778	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTTCATTGAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-1	NA	91443800	91418302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424921_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.102	chr16	-	2759	16	ISM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	41	6262	1	-5775	5prime_fragment	FALSE	canonical	3	1247	junction_15	260.318744789708	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCATGTTCCTGAGAGC	NA	False	NA	NA	False	AAAAAG	-33	NA	91443799	91424335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.103	chr16	-	2270	14	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	3689	combination_of_known_junctions	FALSE	canonical	3	68	junction_13	511.976619750939	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAAATGTAACCA	NA	False	NA	NA	False	NA	NA	NA	91443810	91426603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.104	chr16	-	2531	10	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1247	junction_9	255.781783924607	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443818	91430292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.105	chr16	-	1919	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-54	0	-37	0	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443877	91430292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.106	chr16	-	3604	10	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	1247	junction_9	250.309635412317	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTTGATTTTTTTTT	NA	False	NA	-3	True	AATAAA	-21	NA	91443803	91430293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.107	chr16	-	4644	9	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	643.9972704717	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTTGATTTTTTTT	NA	False	NA	-4	True	AATAAA	-20	NA	91443834	91430294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91434681_91434727_91434944_91435614_91435684_91436227_91438578_91439844_91440035_91443771
ES.14051.108	chr16	-	2008	11	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	565.765154458986	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTTTGATTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	91443812	91430295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.109	chr16	-	1837	11	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_10	513.548673447805	1709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	91443843	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91439992_91443771
ES.14051.11	chr16	-	3191	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	425.974662038029	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAGCATTTATTTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	91443818	91418281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419826_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.110	chr16	-	1863	11	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	588.395241313184	1709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	91443832	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91430995_91432887_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.111	chr16	-	1687	1	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	3331	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1701	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	9557	False	NA	-7	True	AATAAA	-17	NA	91431984	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430300_91432000
ES.14051.114	chr16	-	3989	9	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	6	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	652.180369510613	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	91443794	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91436851_91437667_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.115	chr16	-	3376	9	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	1247	junction_8	271.281420991191	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	91443818	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.116	chr16	-	3114	10	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	1247	junction_9	223.151169489305	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	91443810	91430297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91440035_91443771
ES.14051.117	chr16	-	4238	4	ISM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	6647	6	-1851	-6	intron_retention	FALSE	canonical	3	1634	junction_3	167.754450181077	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGAGTGTTTTGATTTT	4375	False	NA	-8	True	AATAAA	-16	NA	91437166	91430298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879
ES.14051.119	chr16	-	1777	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-14	102	3	-102	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGGCCCTGGTGTGTC	NA	False	NA	0	True	ATTAAA	-16	NA	91443837	91430394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.12	chr16	-	3464	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_21	407.127507368682	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAGCATTTATTTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	91443837	91418281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.120	chr16	-	3246	10	NNC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	7	-103	intron_retention	FALSE	non_canonical	0	0	junction_4	627.950713643541	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGAGGCCCTGGTGTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	91443833	91430395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91434681_91434727_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.121	chr16	-	1498	10	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	-1	-187	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	612.447730195992	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTATCTTTGAAATT	NA	False	NA	-2	True	AATAAA	-21	NA	91443818	91430479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438481_91438578_91439844_91440035_91443771
ES.14051.123	chr16	-	1802	11	NIC	ENSMUSG00000022962.16	novel	1865	11	NA	NA	4	-202	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	565.765154458986	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTTCTTGGCAATTC	NA	False	NA	-17	True	AATAAA	-6	NA	91443805	91430494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.124	chr16	-	1080	4	ISM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-6	7246	-6	504	5prime_fragment	FALSE	canonical	3	1247	junction_3	399.201703403179	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAAATGTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	91443829	91437538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.125	chr16	-	177	1	Intergenic	novelGene_11768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAGAAGAAG	3639	False	NA	NA	False	NA	NA	NA	91437902	91437725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91437700_91437900
ES.14051.126	chr16	-	5595	2	NNC	ENSMUSG00000022962.16	novel	443	2	NA	NA	-6	19	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCAGGCAGCCCTTGGG	NA	False	NA	NA	False	TATAAA	-36	NA	91443829	91438023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91442225_91442435
ES.14051.13	chr16	-	3327	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	423.491999833412	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443831	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.17	chr16	-	3397	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	419.593356756293	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443814	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91439992_91443614
ES.14051.18	chr16	-	3186	21	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	486.735975658262	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443832	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.2	chr16	-	3931	19	Fusion	ENSMUSG00000039763.11_ENSMUSG00000022962.16	novel	1865	11	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	586.351798921744	1784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGGTCCATTGATCT	NA	False	NA	NA	False	AATAAA	-16	NA	91443812	91411141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91412157_91413751_91414268_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.21	chr16	-	3280	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	591.259630038597	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443830	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421358_91422217_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427869_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.22	chr16	-	6666	18	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	460	junction_17	371.273362947845	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443821	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.23	chr16	-	3255	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_2	482.043260730217	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443833	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418807_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.26	chr16	-	2283	17	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	480.365550908889	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443819	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421286_91427881_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.27	chr16	-	3267	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_21	374.653436229953	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443841	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91439992_91443771
ES.14051.28	chr16	-	3288	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	485.36854641637	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443829	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427123_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.29	chr16	-	3353	23	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	525.986511155329	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443831	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91436611_91436665_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.3	chr16	-	1435	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	7	1926	-1	657	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTTCCACTCTGGTCA	9256	False	NA	NA	False	ATTAAA	-24	NA	91415880	91413067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91414268_91415645
ES.14051.30	chr16	-	3275	23	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	535.197663724533	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443812	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422365_91424010_91424049_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.32	chr16	-	4722	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2	junction_18	581.089936876581	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443834	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91436611_91436665_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.35	chr16	-	5344	21	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	429.485261679606	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	1565	False	NA	NA	False	AATAAA	-21	NA	91439976	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91423397_91423740_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ES.14051.36	chr16	-	4404	20	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_4	510.592670674247	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443821	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91421353_91422201_91422365_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.38	chr16	-	4559	20	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1247	junction_19	242.989768716362	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443824	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.39	chr16	-	5832	19	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	7	-2	intron_retention	FALSE	canonical	3	1247	junction_18	245.927395689495	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443833	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91421353_91422201_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.4	chr16	-	5070	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	-15	-1779	6	1561	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGACACATTTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	91443834	91416512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.40	chr16	-	3123	21	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	434.316520523915	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443834	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425581_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.41	chr16	-	4137	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1247	junction_20	232.673693184253	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443819	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.42	chr16	-	4494	20	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	460	junction_19	352.729428686487	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443843	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91420390_91421214_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.43	chr16	-	5887	19	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_16	573.295780962267	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443814	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418664_91418734_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438228_91438492_91438578_91439844_91440035_91443771
ES.14051.46	chr16	-	3027	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	437.729322755513	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443810	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.47	chr16	-	3379	20	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_17	489.050626454416	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443818	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91438099_91438578_91439844_91440032_91443771
ES.14051.48	chr16	-	3273	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	416.612252229196	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443821	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430978_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.49	chr16	-	3275	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	426.170534250127	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443812	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418740_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.50	chr16	-	3272	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	426.840940173991	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443817	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420376_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.52	chr16	-	3393	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	68	junction_21	514.399185012914	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443818	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438224_91438481_91438578_91439844_91440035_91443614
ES.14051.54	chr16	-	3135	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	436.405760159052	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443808	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.55	chr16	-	3717	20	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1247	junction_19	242.772227758113	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443814	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418851_91419780_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.56	chr16	-	3257	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	407.561756098402	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443799	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439855_91440035_91443771
ES.14051.57	chr16	-	3100	21	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	556.262480758859	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443797	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421386_91422201_91422409_91424914_91425068_91425309_91425562_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.6	chr16	-	5022	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	1505	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	423.491999833412	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	91443812	91416568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.60	chr16	-	5378	19	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1247	junction_18	246.816220928812	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443818	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.61	chr16	-	3326	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	539.929767835606	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443877	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433954_91434817_91434944_91435614_91435678_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.62	chr16	-	3261	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	487.358956862872	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443819	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420366_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.63	chr16	-	4656	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1247	junction_20	236.553646135501	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTAGCATTTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	91443818	91418282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.65	chr16	-	3196	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	431.345856013478	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTATCTAGCATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	91443799	91418285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.69	chr16	-	5540	12	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-390	0	intron_retention	FALSE	canonical	3	1369	junction_5	186.793075065865	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	5836	False	NA	NA	False	AATAAA	-12	NA	91435705	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817
ES.14051.7	chr16	-	3938	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	21	-441	0	441	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTTTATTTCAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	91443819	91417632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.70	chr16	-	3028	19	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	671.775609214716	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443818	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418730_91418851_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.71	chr16	-	3497	21	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1247	junction_20	228.474922037409	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443830	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438578_91439844_91440035_91443771
ES.14051.74	chr16	-	4928	21	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_14	434.221472868397	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443816	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91434681_91434727_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.75	chr16	-	5394	20	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	68	junction_19	411.664602743975	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443810	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91438578_91439844_91440035_91443614
ES.14051.78	chr16	-	5588	20	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1247	junction_19	242.415122079342	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443829	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.79	chr16	-	3084	21	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	436.176466582047	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443852	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419826_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.8	chr16	-	4555	21	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	460	junction_20	324.429946213354	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAGCATTTATTTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	91443821	91418281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91440032_91443771
ES.14051.81	chr16	-	2518	8	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-7190	0	intron_retention	FALSE	canonical	0	0	junction_6	576.450397887355	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91427095	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91422409_91424914_91425088_91425309_91425562_91426930
ES.14051.83	chr16	-	3238	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	91	junction_19	403.273734844484	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443829	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438224_91438481_91438578_91439844_91440035_91443771
ES.14051.85	chr16	-	4337	19	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_6	451.948497557459	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443810	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.88	chr16	-	5040	20	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1247	junction_19	230.803678372201	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443847	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.9	chr16	-	4055	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	-745	208	-745	-1	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAGCATTTATTTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	91444585	91418281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.90	chr16	-	3302	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	416.612252229196	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443819	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91431018_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.91	chr16	-	3463	22	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	531.158806765486	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443819	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443614
ES.14051.94	chr16	-	3292	22	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	424.286793863198	1775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443834	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435678_91436223_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14051.95	chr16	-	3269	22	NNC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	484.087307767876	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443818	91418291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435620_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ES.14051.98	chr16	-	1867	14	NNC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	519.595723593191	1775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAACTTATCTAG	NA	False	NA	NA	False	AATAAA	-10	NA	91443829	91418293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422343_91433937_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ES.14052.1	chr16	-	2266	1	Antisense	novelGene_ENSMUSG00000022961.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGGAAGGAAGGAAGAGAA	3585	False	NA	NA	False	NA	NA	NA	91463074	91460808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91460800_91463100
ES.14053.1	chr16	-	4510	1	Genic_Genomic	ENSMUSG00000022960.14	novel	NA	NA	NA	NA	3020	3027	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTTAAATATTTCACTA	9749	False	NA	NA	False	AATAAA	-18	NA	91475178	91470668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_91470700_91475200
ES.14053.10	chr16	-	6076	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-4	203	intron_retention	FALSE	canonical	1	31	junction_11	654.957699015746	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAATAGCGGCTGGGTG	9176	False	NA	NA	False	CATAAA	-12	NA	91525515	91475949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.100	chr16	-	2299	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	5	15	intron_retention	FALSE	canonical	1	405	junction_2	370.244993716189	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCTTCTTTTAGTTAT	9185	False	NA	-9	True	NA	NA	NA	91525506	91486478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.101	chr16	-	1499	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	190	276	17	8	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTCCAAAAGCTTCTTT	9018	False	NA	-16	True	NA	NA	NA	91525673	91486485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.102	chr16	-	3043	5	NIC	ENSMUSG00000058240.15	novel	1727	12	NA	NA	24	-23	intron_retention	FALSE	canonical	1	80	junction_3	618.709291590162	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATAATTTTTTTAC	NA	False	NA	-47	True	NA	NA	NA	91496152	91486516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91492248_91496064
ES.14053.103	chr16	-	1410	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-7	-27	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_11	503.364154685474	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATCCAGATAATTTTT	9188	False	NA	-51	True	NA	NA	NA	91525503	91486520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511831_91514291_91514364_91525445
ES.14053.104	chr16	-	904	9	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	1	-28	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	505.918965843345	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAATCCAGATAATTTT	9207	False	NA	-52	True	NA	NA	NA	91525484	91486521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.105	chr16	-	1215	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	5	-40	combination_of_known_splicesites	FALSE	canonical	1	20	junction_7	520.33210945725	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATGTGCAAACAAT	9185	False	NA	44	True	NA	NA	NA	91525506	91486533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.106	chr16	-	1303	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	3	-40	at_least_one_novel_splicesite	FALSE	canonical	1	103	junction_4	495.200941257407	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATGTGCAAACAAT	9198	False	NA	44	True	NA	NA	NA	91525493	91486533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492116_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.107	chr16	-	1384	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	203	378	30	-94	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTGCCACAGTAAGAT	9031	False	NA	-10	True	GATAAA	-26	NA	91525660	91486587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.109	chr16	-	1169	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-19	-101	combination_of_known_junctions	FALSE	canonical	1	79	junction_10	496.448078065447	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTCCTGCCACA	9161	False	NA	-17	True	GATAAA	-19	NA	91525530	91486594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91514291_91514364_91525445
ES.14053.11	chr16	-	4996	23	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	5	139	multi-exon	FALSE	canonical	1	2	junction_6	665.749655130053	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGTAATACACATGA	9185	False	NA	NA	False	AATAAA	-23	NA	91525506	91476013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91480972_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492116_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.110	chr16	-	1400	14	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	22	-101	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_4	643.230493256983	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTCCTGCCACA	9124	False	NA	-17	True	GATAAA	-19	NA	91525567	91486594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492116_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.111	chr16	-	2257	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	-101	intron_retention	FALSE	canonical	1	31	junction_4	602.929699237168	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTCCTGCCACA	9195	False	NA	-17	True	GATAAA	-19	NA	91525496	91486594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.112	chr16	-	3293	9	NNC	ENSMUSG00000058240.15	novel	1727	12	NA	NA	-9	-101	intron_retention	FALSE	non_canonical	0	0	junction_2	738.179422210481	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTCCTGCCACA	9171	False	NA	-17	True	GATAAA	-19	NA	91525520	91486594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487642_91489486_91490192_91490231_91490512_91490591_91492248_91496064_91496177_91497959_91498094_91514291_91514364_91525445
ES.14053.113	chr16	-	2176	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-4	-101	intron_retention	FALSE	non_canonical	0	0	junction_2	469.600621594194	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTCCTGCCACA	9191	False	NA	-17	True	GATAAA	-19	NA	91525500	91486594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487637_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.115	chr16	-	1213	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-1	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	451.651844775253	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGTTTTCCTGCCAC	9194	False	NA	-18	True	GATAAA	-18	NA	91525497	91486595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487630_91489478_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.118	chr16	-	3414	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-15	-107	intron_retention	FALSE	non_canonical	0	0	junction_2	657.412731851156	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCTGTTTTCCT	9165	False	NA	-23	True	GATAAA	-13	NA	91525526	91486600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487633_91489482_91489593_91489731_91490352_91490471_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.119	chr16	-	1711	5	NNC	ENSMUSG00000058240.15	novel	1727	12	NA	NA	-1189	-108	intron_retention	FALSE	canonical	1	1	junction_3	367.262423207167	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAAGCCTGTTTTCC	NA	False	NA	-24	True	GATAAA	-12	NA	91491069	91486601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91490192_91490231_91490512_91490591
ES.14053.12	chr16	-	4553	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-5	19	multi-exon	FALSE	canonical	1	157	junction_4	630.301097827778	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9175	False	NA	18	True	AATAAA	-38	NA	91525516	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.120	chr16	-	1138	12	FSM	ENSMUSG00000058240.15	ENSMUST00000117644.8	1727	12	203	386	-1	-122	multi-exon	FALSE	canonical	0	0	junction_8	525.741459887489	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGATTTTATATTTT	9204	False	NA	-38	True	NA	NA	NA	91525487	91486615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.121	chr16	-	1097	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	372	496	-3	-212	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTCCCTGATCTCA	9200	False	NA	-128	True	AAAAAG	-17	NA	91525491	91486705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.122	chr16	-	1492	12	NNC	ENSMUSG00000058240.15	novel	1187	11	NA	NA	4	-1208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	454.488887389263	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGAATGGTTTCTT	9184	False	NA	NA	False	TATAAA	-19	NA	91525507	91487701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91488026_91489287_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.123	chr16	-	969	10	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	1	-311	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	461.636487849022	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTCCTTGAGTCTGT	9207	False	NA	NA	False	CATAAA	-38	NA	91525484	91489385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91514291_91514364_91525445
ES.14053.124	chr16	-	1057	11	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	360	3185	-7	-320	5prime_fragment	FALSE	canonical	3	1162	junction_2	171.635922813378	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGTGAACTTTCCT	9188	False	NA	NA	False	CATAAA	-29	NA	91525503	91489394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.125	chr16	-	3378	11	NNC	ENSMUSG00000058240.15	novel	1154	10	NA	NA	4	-320	intron_retention	TRUE	non_canonical	0	0	junction_1	621.872342205376	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGTGAACTTTCCT	9184	False	NA	NA	False	CATAAA	-29	NA	91525507	91489394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91490211_91490250_91490512_91490591_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.126	chr16	-	1720	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	300	5019	26	-3	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTCTTTTTTCTCTTT	9128	False	NA	NA	False	AATAAA	-21	NA	91525563	91491228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.127	chr16	-	1502	7	NIC	ENSMUSG00000058240.15	novel	592	8	NA	NA	0	-3	intron_retention	FALSE	canonical	2	12	junction_5	580.92015133082	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTCTTTTTTCTCTTT	9195	False	NA	NA	False	AATAAA	-21	NA	91525496	91491228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91514291_91514364_91525445
ES.14053.128	chr16	-	1061	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	86	7	-7	-1	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAATTCTCTTTTTTCT	9188	False	NA	NA	False	AATAAA	-17	NA	91525503	91491232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.129	chr16	-	1549	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	352	5138	0	-116	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTCTAGAGTACATT	9180	False	NA	0	True	AATAAA	-23	NA	91525511	91491347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.13	chr16	-	5277	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-4	19	intron_retention	FALSE	canonical	1	157	junction_3	628.710050420701	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9176	False	NA	18	True	AATAAA	-38	NA	91525515	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.130	chr16	-	956	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	76	122	-2	-116	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTCTAGAGTACATT	9178	False	NA	0	True	AATAAA	-23	NA	91525513	91491347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.131	chr16	-	1458	8	NIC	ENSMUSG00000058240.15	novel	1154	10	NA	NA	3	-116	intron_retention	FALSE	canonical	1	4	junction_5	549.46567737416	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTCTAGAGTACATT	9198	False	NA	0	True	AATAAA	-23	NA	91525493	91491347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91511636_91511715_91514291_91514364_91525445
ES.14053.132	chr16	-	1526	9	NNC	ENSMUSG00000058240.15	novel	1154	10	NA	NA	6	-116	intron_retention	FALSE	canonical	2	3	junction_2	686.83112917223	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTCTAGAGTACATT	9186	False	NA	0	True	AATAAA	-23	NA	91525505	91491347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91492248_91496064_91496177_91498146_91498264_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.133	chr16	-	1051	1	Intergenic	novelGene_11769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91497361	91496310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91496300_91497400
ES.14053.134	chr16	-	4170	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-5	-3403	3	3403	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACAATGTCTTTTTCTC	9198	False	NA	NA	False	NA	NA	NA	91525493	91500327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.135	chr16	-	542	7	NNC	ENSMUSG00000058240.15	novel	762	6	NA	NA	1	3383	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	570.565630658638	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAAATGAAATACA	9196	False	NA	NA	False	NA	NA	NA	91525495	91500347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91500503_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.136	chr16	-	821	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-15	-44	-7	44	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATTTTTCATGAGAA	9188	False	NA	NA	False	AATAGA	-16	NA	91525503	91503686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.137	chr16	-	3520	7	NNC	ENSMUSG00000058240.15	novel	762	6	NA	NA	-3	-177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	742.993812595741	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGTGTGTACTC	9192	False	NA	NA	False	TATAAA	-18	NA	91525499	91503907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91504182_91505716_91508052_91508254_91508616_91508809_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.138	chr16	-	602	6	FSM	ENSMUSG00000058240.15	ENSMUST00000141664.9	762	6	-19	179	4	-179	multi-exon	FALSE	canonical	3	1466	junction_2	55.2268050859363	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTGTGTAC	9184	False	NA	NA	False	TATAAA	-16	NA	91525507	91503909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.139	chr16	-	599	6	NNC	ENSMUSG00000058240.15	novel	600	3	NA	NA	2	-1528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	627.315741871667	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTTATTCTTTTCTT	9197	False	NA	NA	False	AATGAA	-15	NA	91525494	91505258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91505541_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.14	chr16	-	5082	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-7	19	intron_retention	FALSE	non_canonical	0	0	junction_4	636.450538141025	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9188	False	NA	18	True	AATAAA	-38	NA	91525503	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479520_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.140	chr16	-	313	2	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-7	-12440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGTGTACTATACTCA	9188	False	NA	NA	False	ATTAAA	-21	NA	91525503	91524345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91524601_91525445
ES.14053.15	chr16	-	6003	20	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-5	19	intron_retention	FALSE	canonical	1	157	junction_4	640.511888433288	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9175	False	NA	18	True	AATAAA	-38	NA	91525516	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.16	chr16	-	5219	23	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-5	19	intron_retention	FALSE	canonical	0	0	junction_6	666.648514387857	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9175	False	NA	18	True	AATAAA	-38	NA	91525516	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480145_91480197_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.17	chr16	-	5637	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	1	19	intron_retention	FALSE	canonical	1	31	junction_11	654.048744360847	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCTTAGTTATATGTGT	9196	False	NA	18	True	AATAAA	-38	NA	91525495	91476133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.18	chr16	-	6997	15	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-7	9	intron_retention	FALSE	canonical	0	0	junction_8	632.406224394622	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	9188	False	NA	8	True	AATAAA	-28	NA	91525503	91476143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91514291_91514364_91525445
ES.14053.19	chr16	-	5145	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-3	9	intron_retention	FALSE	non_canonical	0	0	junction_10	669.279248160393	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	9192	False	NA	8	True	AATAAA	-28	NA	91525499	91476143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91486804_91487591_91487642_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.2	chr16	-	7262	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	21	-4918	16	2461	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGCAAGTATGCACG	NA	False	NA	NA	False	AATACA	-15	NA	91485637	91471234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.20	chr16	-	4398	7	NIC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	2	9	intron_retention	FALSE	canonical	3	157	junction_3	25.1639071334764	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	NA	False	NA	8	True	AATAAA	-28	NA	91485656	91476143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.21	chr16	-	5035	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-7	9	intron_retention	FALSE	canonical	1	157	junction_4	627.670168161591	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	9173	False	NA	8	True	AATAAA	-28	NA	91525518	91476143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.22	chr16	-	4396	20	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	2658	9	multi-exon	FALSE	non_canonical	0	0	junction_4	621.618640383332	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAAATAGTGCTTAG	3109	False	NA	8	True	AATAAA	-28	NA	91511699	91476143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479520_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636
ES.14053.23	chr16	-	4904	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-7	0	intron_retention	FALSE	canonical	1	6	junction_2	670.38442959746	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	9188	False	NA	-1	True	AATAAA	-19	NA	91525503	91476152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478188_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483138_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.24	chr16	-	6138	18	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	3	0	intron_retention	FALSE	canonical	1	28	junction_9	662.323544431761	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	9198	False	NA	-1	True	AATAAA	-19	NA	91525493	91476152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.25	chr16	-	3061	8	NIC	ENSMUSG00000022960.14	novel	2482	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	18	junction_6	64.4553317881335	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	NA	False	NA	-1	True	AATAAA	-19	NA	91485628	91476152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91479182_91479403_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91484764_91485294
ES.14053.26	chr16	-	4491	23	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	5	0	multi-exon	FALSE	canonical	0	0	junction_14	675.63139126265	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	9185	False	NA	-1	True	AATAAA	-19	NA	91525506	91476152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479517_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491185_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.27	chr16	-	2172	10	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	76.3541132964292	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATTGGGTAAGAAACAAA	NA	False	NA	-2	True	AATAAA	-18	NA	91485657	91476153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91478188_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91484764_91485294
ES.14053.28	chr16	-	3110	9	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2	junction_6	66.2136692836154	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATTGGGTAAGAAACAAA	NA	False	NA	-2	True	AATAAA	-18	NA	91485656	91476153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91480972_91481369_91483054_91483259_91484682
ES.14053.29	chr16	-	6256	19	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	2	-2	intron_retention	FALSE	canonical	1	157	junction_3	614.439695079093	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9197	False	NA	-3	True	AATAAA	-17	NA	91525494	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.3	chr16	-	2300	11	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	1	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9603202126206	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAAGCATATGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	91485657	91472780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91473333_91476768_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.30	chr16	-	5587	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	3	-2	intron_retention	FALSE	canonical	1	3	junction_5	664.159310707905	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9198	False	NA	-3	True	AATAAA	-17	NA	91525493	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479683_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.31	chr16	-	2361	10	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.1981012372998	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91485658	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483257_91484682_91484764_91485294
ES.14053.32	chr16	-	6992	15	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-4	-2	intron_retention	TRUE	canonical	0	0	junction_7	642.646505173914	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9176	False	NA	-3	True	AATAAA	-17	NA	91525515	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.33	chr16	-	2364	10	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.2946007608253	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91485636	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91478281_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.34	chr16	-	5507	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	4	-2	intron_retention	FALSE	canonical	1	18	junction_7	662.451771829467	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9184	False	NA	-3	True	AATAAA	-17	NA	91525507	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483138_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.35	chr16	-	4182	17	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	2365	10	NA	NA	-1891	-2	multi-exon	FALSE	canonical	1	31	junction_13	513.618136209918	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91498067	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959
ES.14053.36	chr16	-	4336	7	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	86.4574397544184	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91485657	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478982_91479182_91479403_91479520_91479630_91479710_91480520_91483259_91484682_91484764_91485294
ES.14053.37	chr16	-	5539	18	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	28	junction_9	659.647987284148	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9192	False	NA	-3	True	AATAAA	-17	NA	91525499	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.38	chr16	-	5006	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	0	-2	intron_retention	FALSE	canonical	1	18	junction_8	660.196548758926	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	9195	False	NA	-3	True	AATAAA	-17	NA	91525496	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.39	chr16	-	3553	8	NIC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	20	-2	intron_retention	FALSE	canonical	3	157	junction_3	23.3019224922909	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91485633	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.4	chr16	-	3495	1	Genic_Genomic	ENSMUSG00000022960.14	novel	NA	NA	NA	NA	1921	913	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGACAAGCATATGTG	8650	False	NA	NA	False	AATAAA	-13	NA	91476277	91472782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_91472800_91476300
ES.14053.40	chr16	-	4922	6	NNC	ENSMUSG00000022960.14	novel	1565	8	NA	NA	1	-2	intron_retention	FALSE	canonical	2	3	junction_3	81.2487538365974	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91485652	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91479182_91479403_91479517_91479630_91481369_91483054_91483259_91484682
ES.14053.41	chr16	-	4535	8	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	2365	10	NA	NA	-908	-2	intron_retention	FALSE	canonical	2	3	junction_3	69.4688301855367	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATTGGGTAAGAAACAA	NA	False	NA	-3	True	AATAAA	-17	NA	91486566	91476154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479517_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682
ES.14053.42	chr16	-	2354	10	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	61.947608289905	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAATTGGGTAAGAAACA	NA	False	NA	-4	True	AATAAA	-16	NA	91485677	91476155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479683_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.43	chr16	-	4472	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	1	-3	multi-exon	FALSE	canonical	1	6	junction_2	654.909382525344	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAATTGGGTAAGAAACA	9196	False	NA	-4	True	AATAAA	-16	NA	91525495	91476155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478188_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492116_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.44	chr16	-	3530	11	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	2365	10	NA	NA	-1089	-3	multi-exon	FALSE	canonical	0	0	junction_10	78.3837355578311	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAATTGGGTAAGAAACA	NA	False	NA	-4	True	AATAAA	-16	NA	91486747	91476155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484757_91484834_91484921_91485294
ES.14053.45	chr16	-	6840	10	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	2365	10	NA	NA	-1287	-4	intron_retention	FALSE	canonical	1	80	junction_9	233.992455296752	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTGGGTAAGAAAC	NA	False	NA	-5	True	AATAAA	-15	NA	91491167	91476156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91489731
ES.14053.46	chr16	-	4792	25	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	2	-4	multi-exon	FALSE	canonical	0	0	junction_21	611.010410895119	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTGGGTAAGAAAC	9197	False	NA	-5	True	AATAAA	-15	NA	91525494	91476156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91493663_91493774_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91509244_91509335_91511636_91511715_91514291_91514364_91525445
ES.14053.47	chr16	-	3102	10	NNC	ENSMUSG00000022960.14	novel	2365	10	NA	NA	4	-4	intron_retention	FALSE	canonical	1	1	junction_5	80.356151669372	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTGGGTAAGAAAC	NA	False	NA	-5	True	AATAAA	-15	NA	91485649	91476156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91479182_91479403_91479509_91479630_91479710_91480520_91480624_91480972_91481074_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.48	chr16	-	5271	4	NIC	ENSMUSG00000022960.14	novel	1565	8	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	172	junction_3	20.8539897594894	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTGGGTAAGAAAC	NA	False	NA	-5	True	AATAAA	-15	NA	91485667	91476156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91481369_91483054_91483259_91484682
ES.14053.49	chr16	-	3588	7	NIC	ENSMUSG00000022960.14	novel	2482	9	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	18	junction_5	69.4278202323983	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAATTGGGTAAGAAAC	NA	False	NA	-5	True	AATAAA	-15	NA	91485669	91476156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91479182_91479403_91479710_91480520_91481369_91483054_91483138_91484682_91484764_91485294
ES.14053.5	chr16	-	3183	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	1	-819	1	819	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAGCCTGGAGATGTTTG	NA	False	NA	NA	False	AATACA	-19	NA	91485657	91475333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.50	chr16	-	4791	13	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	2365	10	NA	NA	-2313	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	331.160952391566	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAGAATTGGGTAAGAA	NA	False	NA	-7	True	AATAAA	-13	NA	91492193	91476158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479520_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069
ES.14053.51	chr16	-	4250	7	NNC	ENSMUSG00000022960.14	novel	1755	9	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_4	96.8590040557235	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAGAATTGGGTAAGAA	NA	False	NA	-7	True	AATAAA	-13	NA	91485651	91476158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91476915_91478044_91479509_91479630_91479710_91480145_91480197_91480520_91481369_91483054_91483138_91484682
ES.14053.52	chr16	-	4598	5	NIC	ENSMUSG00000022960.14	novel	1755	9	NA	NA	5	-6	intron_retention	FALSE	canonical	3	18	junction_3	80.6950277278594	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAGAATTGGGTAAGAA	NA	False	NA	-7	True	AATAAA	-13	NA	91485648	91476158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91476915_91478044_91481369_91483054_91483138_91484682_91484764_91485294
ES.14053.53	chr16	-	4387	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	0	-6	multi-exon	FALSE	canonical	1	18	junction_8	638.929795397516	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAGAATTGGGTAAGAA	9195	False	NA	-7	True	AATAAA	-13	NA	91525496	91476158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.54	chr16	-	6616	21	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	0	-26	intron_retention	FALSE	non_canonical	0	0	junction_7	678.641473828413	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAACGTGCATAGAAA	9195	False	NA	-27	True	TATAAA	-13	NA	91525496	91476178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91480972_91481074_91481168_91481369_91483054_91483259_91484682_91486804_91487591_91487632_91489482_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.55	chr16	-	2119	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	-4	250	-4	7	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGACGAGCAGTGAG	NA	False	NA	NA	False	ACTAAA	-13	NA	91485662	91476402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.56	chr16	-	6890	17	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	1	112	intron_retention	FALSE	canonical	1	172	junction_5	617.080474897724	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATTTTGCTTTTATTA	9196	False	NA	NA	False	TTTAAA	-1	NA	91525495	91476603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91479182_91479403_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.57	chr16	-	1870	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	-4	499	-4	64	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTTATATTAACTT	NA	False	NA	NA	False	AATATA	-24	NA	91485662	91476651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ES.14053.58	chr16	-	8472	18	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-2	57	intron_retention	FALSE	canonical	1	157	junction_4	629.705346594272	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCTAAACATTTTTATA	9193	False	NA	NA	False	AATATA	-17	NA	91525498	91476658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91511715_91514291_91514364_91525445
ES.14053.59	chr16	-	2919	13	FSM	ENSMUSG00000058240.15_ENSMUSG00000022960.14	ENSMUST00000073466.13	1965	13	279	-1233	5	1233	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTGTATCAGTTAT	9107	False	NA	NA	False	CATAAA	-23	NA	91525584	91484976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.6	chr16	-	6372	20	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	4	819	intron_retention	FALSE	non_canonical	0	0	junction_9	655.211213328971	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAGCCTGGAGATGTTTG	9184	False	NA	NA	False	AATACA	-19	NA	91525507	91475333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479517_91479630_91479710_91480520_91481369_91483054_91483259_91484682_91486804_91487591_91487638_91489487_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.60	chr16	-	2762	12	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	5	1232	multi-exon	FALSE	canonical	1	79	junction_10	496.448078065447	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTTTGTATCAGTTA	9185	False	NA	NA	False	CATAAA	-22	NA	91525506	91484977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91514291_91514364_91525445
ES.14053.61	chr16	-	5005	13	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	0	1229	intron_retention	TRUE	canonical	0	0	junction_4	607.775606206764	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGATTTTTGTATCAG	9195	False	NA	NA	False	CATAAA	-19	NA	91525496	91484980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91490352_91490471_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.63	chr16	-	1849	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	362	-246	-5	246	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAATGTGTTGTTTGCTG	9190	False	NA	NA	False	NA	NA	NA	91525501	91485963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.64	chr16	-	1521	11	NIC	ENSMUSG00000058240.15	novel	1727	12	NA	NA	-4	18	combination_of_known_junctions	FALSE	canonical	1	16	junction_7	538.753153123023	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCATACGGAATCATAG	9176	False	NA	NA	False	TTTAAA	-36	NA	91525515	91486191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.65	chr16	-	3906	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-29	8	intron_retention	FALSE	canonical	0	0	junction_4	607.775606206764	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCTCCGAGATCATAC	9073	False	NA	NA	False	TTTAAA	-26	NA	91525618	91486201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91490352_91490471_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.67	chr16	-	2060	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	-96	1	-96	-1	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTCTGAATTTCTCCG	8732	False	NA	NA	False	TTTAAA	-17	NA	91525959	91486210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.69	chr16	-	2555	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	469.600621594194	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTCTGAATTTCTCC	9195	False	NA	NA	False	TTTAAA	-16	NA	91525496	91486211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489487_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.7	chr16	-	4972	23	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-7	210	multi-exon	FALSE	canonical	0	0	junction_9	658.239545748185	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGGCTGGGTGCCAATTT	9188	False	NA	NA	False	CATAAA	-19	NA	91525503	91475942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484921_91485294_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.71	chr16	-	1592	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	451.651844775253	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCACTCTGAATTTCTC	9198	False	NA	NA	False	TTTAAA	-15	NA	91525493	91486212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487630_91489478_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.72	chr16	-	1551	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	716.466425514056	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTCACTCTGAATTT	9198	False	NA	NA	False	TTTAAA	-12	NA	91525493	91486215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489487_91489593_91489731_91489816_91492148_91492248_91496064_91496177_91497961_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.73	chr16	-	1520	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	536.561658361032	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCATTCACTCTGAA	9177	False	NA	NA	False	TTTAAA	-9	NA	91525514	91486218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91492116_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.74	chr16	-	1557	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	603.131826386239	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAATGTTTTTAAATA	9195	False	NA	NA	False	NA	NA	NA	91525496	91486233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91498146_91498264_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.75	chr16	-	3904	11	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-4	69	intron_retention	FALSE	canonical	1	405	junction_2	383.899218545701	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATTTGATTTTGTTATC	9191	False	NA	-5	True	AATACA	-28	NA	91525500	91486344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.77	chr16	-	1624	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	203	138	30	66	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCATTTGATTTTGTT	9031	False	NA	-8	True	AATACA	-25	NA	91525660	91486347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.78	chr16	-	1514	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-30	66	combination_of_known_splicesites	FALSE	canonical	1	20	junction_7	520.33210945725	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCATTTGATTTTGTT	9072	False	NA	-8	True	AATACA	-25	NA	91525619	91486347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.79	chr16	-	2633	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-36	66	intron_retention	FALSE	canonical	1	31	junction_4	602.929699237168	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCATTTGATTTTGTT	9066	False	NA	-8	True	AATACA	-25	NA	91525625	91486347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.8	chr16	-	4841	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	-24	210	multi-exon	FALSE	canonical	1	157	junction_4	630.301097827778	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGGCTGGGTGCCAATTT	9078	False	NA	NA	False	CATAAA	-19	NA	91525613	91475942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.80	chr16	-	3657	14	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-4	66	intron_retention	TRUE	canonical	1	1	junction_4	657.085658137642	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCATTTGATTTTGTT	9176	False	NA	-8	True	AATACA	-25	NA	91525515	91486347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91490192_91490231_91490512_91490591_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.82	chr16	-	2336	11	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	3	63	intron_retention	FALSE	canonical	1	79	junction_9	520.654789663938	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACGTCATTTGATTTT	9198	False	NA	-11	True	AATACA	-22	NA	91525493	91486350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91514291_91514364_91525445
ES.14053.83	chr16	-	1462	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	4	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	512.583787188874	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACGTCATTTGATTTT	9184	False	NA	-11	True	AATACA	-22	NA	91525507	91486350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497965_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.84	chr16	-	1431	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	5	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	515.481995320884	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACGTCATTTGATTTT	9185	False	NA	-11	True	AATACA	-22	NA	91525506	91486350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492184_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.85	chr16	-	3778	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-4	63	intron_retention	FALSE	canonical	0	0	junction_3	538.034807931099	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACGTCATTTGATTTT	9191	False	NA	-11	True	AATACA	-22	NA	91525500	91486350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91490352_91490471_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.86	chr16	-	1502	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	30	63	combination_of_known_splicesites	FALSE	canonical	1	28	junction_3	532.163399998084	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACGTCATTTGATTTT	9031	False	NA	-11	True	AATACA	-22	NA	91525660	91486350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.87	chr16	-	6702	14	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-5	62	intron_retention	TRUE	non_canonical	0	0	junction_9	710.339663731248	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAACGTCATTTGATTT	9190	False	NA	-12	True	AATACA	-21	NA	91525501	91486351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91490192_91490231_91490512_91490591_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91508052_91508254_91508616_91508809_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.88	chr16	-	2540	12	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-38	61	intron_retention	FALSE	canonical	0	0	junction_5	535.077054773847	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAACGTCATTTGATT	9064	False	NA	-13	True	AATACA	-20	NA	91525627	91486352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497965_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.9	chr16	-	5227	22	Fusion	ENSMUSG00000058240.15_ENSMUSG00000022960.14	novel	1965	13	NA	NA	6	210	intron_retention	FALSE	canonical	1	18	junction_8	660.196548758926	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGGCTGGGTGCCAATTT	9186	False	NA	NA	False	CATAAA	-19	NA	91525505	91475942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483138_91484682_91486804_91487591_91487638_91489486_91489593_91489731_91489816_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.90	chr16	-	3907	11	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-6	61	intron_retention	FALSE	canonical	0	0	junction_4	560.986131735892	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAACGTCATTTGATT	9174	False	NA	-13	True	AATACA	-20	NA	91525517	91486352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91492248_91496064_91496177_91497965_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.92	chr16	-	2042	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.651844775253	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAACGTCATTTGATT	9195	False	NA	-13	True	AATACA	-20	NA	91525496	91486352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91488026_91489287_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.93	chr16	-	2419	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-4	61	intron_retention	FALSE	canonical	1	405	junction_2	370.244993716189	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAACGTCATTTGATT	9191	False	NA	-13	True	AATACA	-20	NA	91525500	91486352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.95	chr16	-	1451	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	1	61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	451.651844775253	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAAACGTCATTTGATT	9196	False	NA	-13	True	AATACA	-20	NA	91525495	91486352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487622_91489473_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.96	chr16	-	3576	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_4	607.775606206764	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTTTCAGCAAAAGCTAC	9195	False	NA	-18	True	TATAAA	-20	NA	91525496	91486409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91489731_91490352_91490471_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.97	chr16	-	1596	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_11	503.364154685474	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCTTTCAGCAAAAG	9109	False	NA	-22	True	TATAAA	-16	NA	91525582	91486413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511831_91514291_91514364_91525445
ES.14053.98	chr16	-	1283	12	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	515.928994409819	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTGCTTTCAGCAA	9204	False	NA	-25	True	TATAAA	-13	NA	91525487	91486416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ES.14053.99	chr16	-	2219	10	NIC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	-7	-6	intron_retention	FALSE	canonical	1	12	junction_8	554.393963411099	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAAAACTGCTTTCAG	9173	False	NA	-28	True	TATAAA	-10	NA	91525518	91486419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91514291_91514364_91525445
ES.14054.1	chr16	+	5232	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_29	38.020552674622	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAACGTCTCTGTGTTCT	NA	False	NA	11	True	ATTAAA	-21	NA	91526172	91668545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080_91667118_91667337
ES.14054.10	chr16	+	6257	29	NIC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	25	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	47.9973824753996	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAAACGTCTCTGTGT	NA	False	NA	8	True	ATTAAA	-18	NA	91526193	91668542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599925_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91649750_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.11	chr16	+	5685	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	48.0442225934977	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAACGTCTCTGTG	NA	False	NA	7	True	ATTAAA	-17	NA	91526193	91668541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.13	chr16	+	966	1	NIC	ENSMUSG00000022957.21	novel	3898	29	NA	NA	27	-52105	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGAGGAGCTGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	91526195	91527161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526200_91527200
ES.14054.14	chr16	+	4340	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-59	1083	31	75	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCTATTTTGGTTTT	NA	False	NA	16	True	AATAAA	-15	NA	91526199	91667460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.15	chr16	+	5352	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	39.940580867083	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAAACGTCTCTGTGT	NA	False	NA	8	True	ATTAAA	-18	NA	91526204	91668542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666633_91667080
ES.14054.16	chr16	+	2607	17	NNC	ENSMUSG00000022957.21	novel	6103	16	NA	NA	-35	237	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	61.2617016883305	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGCCCAACGTGCT	NA	False	NA	NA	False	TATAAA	-13	NA	91526205	91625435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.18	chr16	+	5514	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	48.0732942195818	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAAACGTCTCTGTGT	NA	False	NA	8	True	ATTAAA	-18	NA	91526208	91668542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91582621_91582723_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.2	chr16	+	3536	22	NIC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	7	88	combination_of_known_junctions	FALSE	canonical	3	8	junction_21	40.4725488557906	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTGTTTGCACGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	91526175	91650236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91649750
ES.14054.20	chr16	+	2343	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-44	3804	-27	239	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCCCAACGTGCTCT	NA	False	NA	NA	False	TATAAA	-15	NA	91526213	91625437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.21	chr16	+	3677	23	NNC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	-24	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	61.6608291481689	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGACGTTTTCTTCAT	NA	False	NA	NA	False	AATAAA	-30	NA	91526216	91650160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91649750
ES.14054.22	chr16	+	5132	26	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-22	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.8988416699226	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTCTTGCTGTTGGA	NA	False	NA	21	True	ATTAAA	-31	NA	91526218	91668555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.24	chr16	+	5298	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.9219886082706	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526219	91668543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526393_91579046_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615307_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.25	chr16	+	4240	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-20	73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	48.8806334505867	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCTATTTTGGTT	NA	False	NA	14	True	AATAAA	-13	NA	91526220	91667458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636513_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.26	chr16	+	3382	21	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	52	18757	-20	137	5prime_fragment	FALSE	canonical	1	1	junction_5	42.4903224275834	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAATGCCCGTCCTGGA	NA	False	NA	NA	False	AATAAA	-27	NA	91526220	91648341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598525_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
ES.14054.27	chr16	+	4359	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	-20	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.5434720641565	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTGCTATTTTGGTTT	NA	False	NA	15	True	AATAAA	-14	NA	91526220	91667459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91616262_91616371_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.28	chr16	+	5544	31	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.303947472994	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526220	91668543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91582621_91582723_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91616262_91616371_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.29	chr16	+	5168	28	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	49.3747184881975	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526220	91668543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.3	chr16	+	5454	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-78	-12	12	12	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTCTTGCTGTTGGA	NA	False	NA	21	True	ATTAAA	-31	NA	91526180	91668555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.30	chr16	+	5191	28	NIC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	39.9094654449138	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAACGTCTCTGTG	NA	False	NA	7	True	ATTAAA	-17	NA	91526223	91668541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.31	chr16	+	6134	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-34	3	-17	-3	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGTCTCCTGAAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	91526223	91629238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.32	chr16	+	3243	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-34	2894	-17	1149	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACTGTAACTTACTGC	NA	False	NA	NA	False	AATAAA	-16	NA	91526223	91626347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.33	chr16	+	3032	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-28	3099	-11	944	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGAGGAGTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	91526229	91626142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.34	chr16	+	5385	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.0792464103391	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAAACGTCTCTGTGT	NA	False	NA	8	True	ATTAAA	-18	NA	91526229	91668542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581037_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.35	chr16	+	4089	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	-11	74	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_29	38.020552674622	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTGCTATTTTGGTTT	NA	False	NA	15	True	AATAAA	-14	NA	91526229	91667459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080_91667118_91667337
ES.14054.36	chr16	+	4530	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	-8	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.499643772106	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATCAATCAATTAC	NA	False	NA	-4	True	TTTAAA	-19	NA	91526232	91667440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599925_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615307_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.37	chr16	+	5467	28	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.0561776445584	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATGGAAACGTCTCTGT	NA	False	NA	6	True	ATTAAA	-16	NA	91526242	91668540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590660_91598420_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91648113_91650582_91650789_91651460_91651544_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.38	chr16	+	4907	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-12	469	6	-161	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGTCTCCCTGCAATT	NA	False	NA	NA	False	AAGAAA	-7	NA	91526246	91668074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.39	chr16	+	3435	21	NNC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	6	113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.0040405078407	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATCAGTCAATCAAA	NA	False	NA	NA	False	AATAAA	-3	NA	91526246	91648317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579101_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
ES.14054.4	chr16	+	4611	30	NNC	ENSMUSG00000022957.21	novel	5393	30	NA	NA	16	73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	48.0442225934977	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCTATTTTGGTT	NA	False	NA	14	True	AATAAA	-13	NA	91526184	91667458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91576444_91576703_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.41	chr16	+	3846	28	NNC	ENSMUSG00000022957.21	novel	3787	28	NA	NA	0	72	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_23	48.4676295181754	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTTTGCTATTTTGGT	NA	False	NA	13	True	AATAAA	-12	NA	91526257	91667457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080_91667118_91667337
ES.14054.43	chr16	+	5300	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	39.0792464103391	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAACGTCTCTGTGTTCT	NA	False	NA	11	True	ATTAAA	-21	NA	91526257	91668545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650722_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.44	chr16	+	4241	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	0	73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	48.9229272031269	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCTATTTTGGTT	NA	False	NA	14	True	AATAAA	-13	NA	91526258	91667458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617450_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658080_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.45	chr16	+	4253	29	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	2	165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.5635629108917	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTGTACCTTTGCCG	NA	False	NA	106	True	ATTAAA	-28	NA	91526262	91667550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598528_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.46	chr16	+	5206	27	NIC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.9444140402354	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526263	91668543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526488_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.48	chr16	+	4888	28	NNC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_24	47.9158498767386	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTAGATGGAAACGT	NA	False	NA	0	True	ATTAAA	-10	NA	91526337	91668534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91664907_91665026_91666505_91666698_91667080_91667118_91667337
ES.14054.49	chr16	+	4025	27	NIC	ENSMUSG00000022957.21	novel	5364	29	NA	NA	-10	72	combination_of_known_splicesites	FALSE	canonical	2	4	junction_24	39.2725267960536	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTTTGCTATTTTGGT	NA	False	NA	13	True	AATAAA	-12	NA	91526343	91667457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91664907_91665026_91666505_91666698_91667080
ES.14054.5	chr16	+	3428	21	NNC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	17	130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.7885498702632	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAACAGCAAATGCCCG	NA	False	NA	NA	False	AATAAA	-20	NA	91526185	91648334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526393_91579046_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
ES.14054.52	chr16	+	2644	20	NNC	ENSMUSG00000022957.21	novel	5147	27	NA	NA	18	-9244	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_19	43.6857323767886	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	91526371	91638960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91638762
ES.14054.53	chr16	+	3432	19	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	-101	27894	25	-8713	5prime_fragment	FALSE	canonical	3	117	junction_18	20.617025207218	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCTTTGCTTTCCTGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	91526378	91639491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376
ES.14054.55	chr16	+	154	1	Intergenic	novelGene_11771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAATAAATAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	91575729	91575883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91575700_91575900
ES.14054.56	chr16	+	5129	28	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	52788	8	-2	-4	3prime_fragment	FALSE	canonical	3	117	junction_17	26.4535205920626	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTAGATGGAAACGTC	NA	False	NA	1	True	ATTAAA	-11	NA	91579046	91668535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.57	chr16	+	9103	14	NNC	ENSMUSG00000022957.21	novel	6103	16	NA	NA	18	1681	intron_retention	FALSE	non_canonical	0	0	junction_4	50.738452208797	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCTGTGTTGTTGATC	NA	False	NA	NA	False	AGTAAA	-21	NA	91579066	91626879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91579109_91580950_91581044_91582175_91582240_91590494_91594997_91598473_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.59	chr16	+	3408	22	NNC	ENSMUSG00000022957.21	novel	14012	39	NA	NA	-17	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.7161274948774	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAACTGTGTAGGCCTCC	2726	False	NA	NA	False	TATAAA	-31	NA	91636569	91709233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650731_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ES.14054.6	chr16	+	3922	17	NNC	ENSMUSG00000022957.21	novel	6103	16	NA	NA	17	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.5829915134853	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATAGCTGTGTTGTTG	NA	False	NA	NA	False	AGTAAA	-18	NA	91526185	91626876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91526488_91552989_91553102_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.60	chr16	+	1846	11	ISM	ENSMUSG00000022957.21	ENSMUST00000114001.8	3898	29	112204	-360	-1143	73	3prime_fragment	FALSE	canonical	3	118	junction_8	17.1184111412245	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCTATTTTGGTT	4529	False	NA	14	True	AATAAA	-13	NA	91638372	91667458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.61	chr16	+	3434	5	ISM	ENSMUSG00000022957.21	ENSMUST00000126374.3	793	7	5876	-1307	-2339	-10	3prime_fragment	FALSE	canonical	3	118	junction_2	8.03118920210451	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATAAAAGTTAGATGGA	1926	False	NA	-5	True	ATTAAA	-5	NA	91656574	91668529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14054.62	chr16	+	1589	7	FSM	ENSMUSG00000022957.21	ENSMUST00000231852.2	1562	7	-15	-12	-15	12	multi-exon	FALSE	canonical	0	0	junction_1	4.09945795874961	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTAGGCCTCCTAT	NA	False	NA	NA	False	TATAAA	-34	NA	91700901	91709236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91701327_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ES.14054.63	chr16	+	1362	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-49	-146	-15	10	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTGTGTAGGCCTCCT	NA	False	NA	NA	False	TATAAA	-32	NA	91700901	91709234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ES.14054.64	chr16	+	1159	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	-18	26	16	-26	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAAATTCTCTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	91700932	91709062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ES.14054.7	chr16	+	3813	16	FSM	ENSMUSG00000022957.21	ENSMUST00000095909.10	6103	16	-72	2362	17	1681	multi-exon	FALSE	canonical	3	154	junction_12	15.0928975202098	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCTGTGTTGTTGATC	NA	False	NA	NA	False	AGTAAA	-21	NA	91526185	91626879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081
ES.14054.8	chr16	+	3532	21	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-70	20195	20	144	5prime_fragment	FALSE	canonical	3	117	junction_18	19.7557586541241	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGTCCTGGAGGCCCCA	NA	False	NA	NA	False	AATAAA	-34	NA	91526188	91648348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
ES.14054.9	chr16	+	4133	27	FSM	ENSMUSG00000022957.21	ENSMUST00000113996.8	5147	27	-71	1085	21	71	multi-exon	FALSE	canonical	2	3	junction_23	40.0925150534811	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTTTGCTATTTTGG	NA	False	NA	12	True	AATAAA	-11	NA	91526189	91667456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ES.14055.1	chr16	-	178	1	Intergenic	novelGene_11770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGAGAATGGG	NA	False	NA	NA	False	NA	NA	NA	91554978	91554800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91554800_91555000
ES.14056.1	chr16	-	810	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	28	0	28	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	839	False	NA	-1	True	AATAAA	-20	NA	91728547	91722101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ES.14056.10	chr16	-	709	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	2316.23864751071	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	925	False	NA	-10	True	AATAAA	-11	NA	91728461	91722110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727247_91727293_91728407
ES.14056.11	chr16	-	4002	5	NIC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-51	-4	intron_retention	FALSE	canonical	3	5653	junction_4	352.467285715994	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGCGTGAGGAG	896	False	NA	-12	True	AATAAA	-9	NA	91728490	91722112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91727293_91728407
ES.14056.12	chr16	-	686	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	2336.96117972797	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGCGTGAGGAG	925	False	NA	-12	True	AATAAA	-9	NA	91728461	91722112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91722280_91722428_91722516_91723346_91723433_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ES.14056.2	chr16	-	708	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2319.97981313057	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGAGGAGCCTTGTCCT	936	False	NA	-3	True	AATAAA	-18	NA	91728450	91722103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91722273_91722424_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ES.14056.3	chr16	-	2645	6	NIC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	5653	junction_5	366.596453883558	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGCGTGAGGAGCCTTG	914	False	NA	-7	True	AATAAA	-14	NA	91728472	91722107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91725898_91727241_91727293_91728407
ES.14056.4	chr16	-	3604	4	NIC	ENSMUSG00000022956.12	novel	838	7	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	5653	junction_3	346.364291205404	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGCGTGAGGAGCCTTG	935	False	NA	-7	True	AATAAA	-14	NA	91728451	91722107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91723460_91723740_91725898_91727241_91727293_91728407
ES.14056.6	chr16	-	595	6	FSM	ENSMUSG00000022956.12	ENSMUST00000155452.8	560	6	-37	2	-32	-2	multi-exon	FALSE	canonical	2	4	junction_3	2452.38509210931	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	915	False	NA	-10	True	AATAAA	-11	NA	91728471	91722110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91725786_91725898_91727241_91727293_91728407
ES.14056.7	chr16	-	740	7	NNC	ENSMUSG00000022956.12	novel	838	7	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	2295.91862515494	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	873	False	NA	-10	True	AATAAA	-11	NA	91728513	91722110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725813_91725898_91727241_91727293_91728407
ES.14056.8	chr16	-	911	7	FSM	ENSMUSG00000022956.12	ENSMUST00000139277.8	710	7	-111	-90	33	-2	multi-exon	FALSE	canonical	1	32	junction_6	2358.49822745087	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	1113	False	NA	-10	True	AATAAA	-11	NA	91728273	91722110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728023
ES.14056.9	chr16	-	1416	4	NIC	ENSMUSG00000022956.12	novel	838	7	NA	NA	2290	-2	intron_retention	FALSE	canonical	3	6240	junction_2	173.605555466664	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	3514	False	NA	-10	True	AATAAA	-11	NA	91725872	91722110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_91722280_91722428_91723460_91723740_91723871_91725786
ES.14057.1	chr16	+	314	2	Intergenic	novelGene_11772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTAATCTCATTGCCTC	NA	False	NA	NA	False	GATAAA	-24	NA	91787488	91790097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91787641_91789935
ES.14058.1	chr16	+	339	1	Intergenic	novelGene_11773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTGTAACAGAAGAGG	1003	False	NA	NA	False	NA	NA	NA	91849875	91850214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91849900_91850200
ES.14058.2	chr16	+	156	1	Intergenic	novelGene_11774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	1004	False	NA	NA	False	NA	NA	NA	91849876	91850032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91849900_91850000
ES.14059.1	chr16	+	679	3	NNC	ENSMUSG00000039680.11	novel	846	3	NA	NA	-268	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGACGGCTGTATTGC	6017	False	NA	1	True	AATAAA	-13	NA	91854889	91909111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_91854938_91896481_91896622_91908620
ES.14059.2	chr16	+	843	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	2	1	2	-1	multi-exon	FALSE	canonical	3	238	junction_1	10.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACGGCTGTATTGCTTC	6287	False	NA	4	True	AATAAA	-16	NA	91855159	91909114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91855369_91896481_91896622_91908620
ES.14059.4	chr16	+	8315	2	FSM	ENSMUSG00000089774.3	ENSMUST00000113975.3	10913	2	1	2597	1	1068	multi-exon	FALSE	canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCGTGTCTATTTTAA	6338	False	NA	NA	False	ATTAAA	-17	NA	91855210	91881764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91855369_91873607
ES.14059.5	chr16	+	2866	2	FSM	ENSMUSG00000089774.3	ENSMUST00000113975.3	10913	2	1	8046	1	-4381	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGAGAGTTTTCTG	6338	False	NA	NA	False	NA	NA	NA	91855210	91876315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_91855369_91873607
ES.14059.6	chr16	+	2363	1	Intergenic	novelGene_11775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGGTACAGTAGGCTT	3319	False	NA	NA	False	NA	NA	NA	91871242	91873605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_91871200_91873600
ES.14059.7	chr16	+	8235	1	Genic_Genomic	ENSMUSG00000089774.3	novel	NA	NA	NA	NA	1181	4	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCCTCAGTGTGAATA	8207	False	NA	16	True	AATAAA	-17	NA	91876130	91884365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_91876100_91884400
ES.1406.1	chr1	+	180	1	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTTTTGTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	134885876	134886056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_134885900_134886100
ES.14060.1	chr16	-	12162	1	Antisense	novelGene_ENSMUSG00000089774.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCACATTCTTACCAG	NA	False	NA	NA	False	NA	NA	NA	91884475	91872313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91872300_91884500
ES.14060.2	chr16	-	6745	1	Antisense	novelGene_ENSMUSG00000089774.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGAAAGGTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	91884475	91877730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91877700_91884500
ES.14060.3	chr16	-	3869	1	Antisense	novelGene_ENSMUSG00000089774.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-21	NA	91884475	91880606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91880600_91884500
ES.14061.1	chr16	-	3776	1	Intergenic	novelGene_11776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGATTCTTCAGTCTC	NA	False	NA	NA	False	ATTAAA	-18	NA	91969481	91965705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_91965700_91969500
ES.14062.1	chr16	-	1496	6	Antisense	novelGene_ENSMUSG00000116747.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTTGGTCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	91976132	91972294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_91973127_91973743_91973862_91974102_91974233_91974654_91974725_91975183_91975413_91976015
ES.14063.1	chr16	-	178	1	Intergenic	novelGene_11777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAGGGAATCGCC	NA	False	NA	NA	False	NA	NA	NA	92090518	92090340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_92090300_92090500
ES.14064.1	chr16	+	536	4	NNC	ENSMUSG00000051989.12	novel	517	4	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	154.540897140171	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTCTGCATTCTCT	NA	False	NA	24	True	AATAAA	-14	NA	92098160	92109927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_92098240_92102175_92102286_92107688_92107858_92109749
ES.14064.2	chr16	+	525	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	-10	2	-10	-2	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTCTGCATTCTCT	NA	False	NA	24	True	AATAAA	-14	NA	92098163	92109927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ES.14064.3	chr16	+	7798	2	ISM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	11	3	1	-3	intron_retention	FALSE	canonical	3	229	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTCTGCATTCTC	NA	False	NA	23	True	AATAAA	-13	NA	92098184	92109926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_92098232_92102175
ES.14064.4	chr16	+	3502	2	ISM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	6358	4	6348	-4	3prime_fragment	FALSE	canonical	3	339	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGCTGTCTGCATTCT	NA	False	NA	22	True	AATAAA	-12	NA	92104531	92109925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_92107858_92109749
ES.14065.1	chr16	+	161	1	Intergenic	novelGene_11778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92133521	92133682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_92133500_92133700
ES.14066.1	chr16	-	3115	2	FSM	ENSMUSG00000039639.8	ENSMUST00000051705.7	3174	2	41	18	41	-18	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGTTCTCAGTAGACA	NA	False	NA	NA	False	ATTAAA	-17	NA	92156315	92142887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92145881_92156193
ES.14067.1	chr16	-	2448	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-123	-1	-123	1	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGTTGGTCGTTTTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	92263157	92188839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ES.14067.2	chr16	-	3207	5	NNC	ENSMUSG00000022951.17	novel	2324	4	NA	NA	6	1	intron_retention	FALSE	canonical	0	0	junction_3	141.073340855032	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGTTGGTCGTTTTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	92263025	92188839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_92190517_92192753_92192914_92194150_92194325_92261597_92262489_92262720
ES.14067.3	chr16	-	2337	4	NNC	ENSMUSG00000022951.17	novel	2324	4	NA	NA	-21	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	122.31471247928	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTTGTTGGTCGTTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	92263055	92188841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_92190517_92192753_92192907_92194150_92194325_92262720
ES.14067.4	chr16	-	2215	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	-24	-1	-24	-1	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTTGTTGGTCGTTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	92196989	92188841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
ES.14067.6	chr16	-	2339	4	NNC	ENSMUSG00000022951.17	novel	2190	4	NA	NA	972	0	intron_retention	FALSE	canonical	0	0	junction_3	133.157383906747	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92195894	92188842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_92190517_92192753_92192914_92194150_92194325_92195563
ES.14067.7	chr16	-	2110	4	NNC	ENSMUSG00000022951.17	novel	2324	4	NA	NA	-2054	-2	intron_retention	FALSE	canonical	0	0	junction_3	133.157383906747	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACGTTGTTGGTCGTT	NA	False	NA	-7	True	AATAAA	-20	NA	92265088	92188844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_92190517_92192753_92192914_92194150_92194325_92264984
ES.14067.8	chr16	-	1886	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	-119	557	-119	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATATCTTAGTACCT	NA	False	NA	NA	False	GATAAA	-16	NA	92263153	92189397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ES.14067.9	chr16	-	1404	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	16	899	16	-344	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTGTCCTCGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	92263015	92189741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ES.14068.1	chr16	+	643	3	NNC	ENSMUSG00000051297.9	novel	706	3	NA	NA	-7826	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGGTCTAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	92267803	92294256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_92267966_92288901_92289064_92293937
ES.14068.2	chr16	+	4547	1	Genic_Genomic	ENSMUSG00000051297.9	novel	NA	NA	NA	NA	-350	-14428	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTGTGCACATGTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	92275279	92279826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_92275300_92279800
ES.14069.1	chr16	-	177	1	Intergenic	novelGene_11779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	92306862	92306685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_92306700_92306900
ES.1407.1	chr1	+	4229	5	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-11	1	intron_retention	FALSE	canonical	3	165	junction_1	273.446064151598	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890291	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890348_134895464_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.10	chr1	+	5923	5	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	8	0	intron_retention	FALSE	canonical	2	3	junction_3	321.221885929337	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890336	134901900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134895637_134896978_134897049_134898987_134899094_134899843_134899928_134901537
ES.1407.12	chr1	+	2042	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	36	-962	10	962	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATATTTAATGTTGT	NA	False	NA	NA	False	NA	NA	NA	134890338	134902862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.13	chr1	+	2215	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	304.722095614275	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTGTGTTTATATGAA	NA	False	NA	12	True	AATAAA	-14	NA	134890339	134901897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890525_134895464_134895637_134896978_134897496_134898295_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.15	chr1	+	3179	6	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	2800	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	280.156813231447	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134893155	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134895637_134896978_134897049_134899009_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.16	chr1	+	2577	6	ISM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	3477	2	3424	1	3prime_fragment	FALSE	canonical	3	687	junction_5	56.6568618968612	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134893779	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.2	chr1	+	963	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-10	14	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTGTGTCTGGGAGTG	NA	False	NA	29	True	AATAAA	-31	NA	134890292	134901914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.4	chr1	+	1118	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	13	-15	-13	15	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTGTCTGGGAGTGA	NA	False	NA	30	True	AATAAA	-32	NA	134890315	134901915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.5	chr1	+	1079	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_3	275.021463808837	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890315	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890525_134895464_134895637_134896978_134897049_134899009_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.6	chr1	+	2860	6	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	165	junction_1	252.762022463819	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTGTGTTTATATGAA	NA	False	NA	12	True	AATAAA	-14	NA	134890317	134901897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890348_134895464_134895637_134896978_134899094_134899638_134899738_134899843_134899928_134901537
ES.1407.7	chr1	+	992	6	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	296.487841234679	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890325	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899843_134899928_134901537
ES.1407.8	chr1	+	5974	4	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	373	junction_1	215.60663770446	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890335	134901900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_134890525_134895464_134899094_134899638_134899738_134899843
ES.1407.9	chr1	+	1111	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	298.145192071842	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTTTATATGAAA	NA	False	NA	13	True	AATAAA	-15	NA	134890336	134901898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899812_134899928_134901537
ES.14070.1	chr16	+	214	1	Intergenic	novelGene_11780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACTTCAATCTGAGG	NA	False	NA	NA	False	NA	NA	NA	92314957	92315171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_92315000_92315200
ES.14071.1	chr16	-	6476	6	FSM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	-1196	-3295	4	-637	multi-exon	FALSE	canonical	0	0	junction_3	1.62480768092719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAATAAACAAGCATG	NA	False	NA	NA	False	TTTAAA	-31	NA	92494209	92398990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863_92486021_92492371
ES.14071.2	chr16	-	3522	6	FSM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	-1640	103	-437	-103	multi-exon	FALSE	canonical	0	0	junction_3	1.62480768092719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCACTTTTTAACCAC	NA	False	NA	-2	True	AATAAA	-19	NA	92494653	92402388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863_92486021_92492371
ES.14071.3	chr16	-	2855	5	FSM	ENSMUSG00000022952.18	ENSMUST00000113956.10	4738	5	37	1846	34	-104	multi-exon	FALSE	canonical	0	0	junction_2	1.80277563773199	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTTCACTTTTTAACCA	NA	False	NA	-3	True	AATAAA	-18	NA	92494179	92402389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_92403013_92410486_92410649_92465595_92465701_92485863_92486021_92492371
ES.14072.1	chr16	-	179	1	Intergenic	novelGene_11781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAC	6969	False	NA	NA	False	NA	NA	NA	92639814	92639635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_92639600_92639800
ES.14073.1	chr16	-	200	1	Intergenic	novelGene_11782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTTAAAGATAC	NA	False	NA	NA	False	NA	NA	NA	93263735	93263535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93263500_93263700
ES.14074.1	chr16	+	181	1	Antisense	novelGene_ENSMUSG00000022948.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGTAAG	NA	False	NA	NA	False	NA	NA	NA	93385603	93385784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_93385600_93385800
ES.14075.1	chr16	-	2329	11	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-732	3	combination_of_known_splicesites	TRUE	canonical	3	12	junction_10	36.3512035564161	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTGTCTTAGTCGGGG	NA	False	NA	2	True	AATAAA	-24	NA	93401683	93380341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
ES.14075.10	chr16	-	5729	2	NNC	ENSMUSG00000022948.17	novel	2617	3	NA	NA	-415	0	intron_retention	FALSE	canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93388392	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93383677_93385992
ES.14075.11	chr16	-	4368	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	45.5861685759189	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400680	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93387175_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024
ES.14075.12	chr16	-	1628	12	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	46.561431916864	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400957	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387143_93387175_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
ES.14075.13	chr16	-	2709	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_6	49.6075959934254	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400703	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387143_93388192_93393185_93393224_93396099_93396196_93398525_93398687_93400024
ES.14075.14	chr16	-	2714	7	ISM	ENSMUSG00000022948.17	ENSMUST00000232870.2	1311	9	4438	0	-1353	0	3prime_fragment	FALSE	canonical	3	69	junction_6	27.1702451630864	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93391731	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134
ES.14075.17	chr16	-	2514	10	NIC	ENSMUSG00000022948.17	novel	2408	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	56	junction_9	29.7806797922561	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTGCAGACTGTCT	NA	False	NA	-7	True	AATAAA	-15	NA	93400681	93380350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ES.14075.18	chr16	-	1284	10	NIC	ENSMUSG00000022948.17	novel	2408	12	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	49.652371793212	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTGCAGACTGTCT	NA	False	NA	-7	True	AATAAA	-15	NA	93400698	93380350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400085_93400453
ES.14075.19	chr16	-	2165	11	NIC	ENSMUSG00000022948.17	novel	2408	12	NA	NA	41	0	intron_retention	FALSE	canonical	2	8	junction_5	42.748216337059	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTGCAGACTGTCT	NA	False	NA	-7	True	AATAAA	-15	NA	93400910	93380350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387143_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400861
ES.14075.2	chr16	-	1720	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	39.6842475822944	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAGACTGTCTTAGTC	NA	False	NA	-2	True	AATAAA	-20	NA	93400759	93380345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ES.14075.20	chr16	-	2060	12	NNC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.8679383512606	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCATTTGCAGACTGT	NA	False	NA	-9	True	AATAAA	-13	NA	93400666	93380352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93380573_93382064_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93395204_93395554_93396099_93396196_93398525_93398687_93400453
ES.14075.21	chr16	-	4691	9	NNC	ENSMUSG00000022948.17	novel	2408	12	NA	NA	70	-2	intron_retention	FALSE	canonical	2	8	junction_4	40.8103464209752	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCATTTGCAGACTGT	NA	False	NA	-9	True	AATAAA	-13	NA	93400881	93380352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386586_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525
ES.14075.22	chr16	-	4062	5	NNC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-84	506	intron_retention	TRUE	non_canonical	0	0	junction_4	54.3943930934062	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGCTGGGATGGCAGC	NA	False	NA	NA	False	AGTAAA	-37	NA	93390462	93381908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93382191_93383124_93383206_93384706_93384789_93386798_93389346_93389392
ES.14075.23	chr16	-	1685	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-1	506	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	27.1051906103737	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGCTGGGATGGCAGC	NA	False	NA	NA	False	AGTAAA	-37	NA	93400704	93381908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ES.14075.24	chr16	-	1353	7	NIC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-2	1097	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	16.6199344830905	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTGATTGATCGGTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	93400681	93386662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ES.14075.3	chr16	-	1884	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAGACTGTCTTAGTC	NA	False	NA	-2	True	AATAAA	-20	NA	93400834	93380345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
ES.14075.4	chr16	-	1816	12	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	40.1213036710482	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAGACTGTCTTAGTC	NA	False	NA	-2	True	AATAAA	-20	NA	93400706	93380345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400085_93400453
ES.14075.5	chr16	-	1768	12	NNC	ENSMUSG00000022948.17	novel	1816	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	41.9468376648663	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAGACTGTCTTAGTC	NA	False	NA	-2	True	AATAAA	-20	NA	93400682	93380345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400061_93400453
ES.14075.6	chr16	-	3807	5	NIC	ENSMUSG00000022948.17	novel	934	7	NA	NA	-274	0	intron_retention	FALSE	canonical	2	8	junction_4	54.1681410055763	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAGACTGTCTTAGTC	NA	False	NA	-2	True	AATAAA	-20	NA	93388251	93380345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93386974_93387143
ES.14075.7	chr16	-	4907	7	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-2	0	intron_retention	FALSE	canonical	2	8	junction_4	32.273139846559	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400681	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93383206_93384706_93384789_93386798_93388192_93390134_93390224_93396099_93396196_93398525_93398687_93400453
ES.14075.9	chr16	-	1691	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	39.6960675354345	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400681	93380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93396099_93396196_93398525_93398687_93400453
ES.14076.1	chr16	+	2537	1	NIC	ENSMUSG00000051483.10	novel	2143	5	NA	NA	-33	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTACAAATGTTTTTA	NA	False	NA	11	True	AATAAA	-23	NA	93404691	93407228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93404700_93407200
ES.14076.2	chr16	+	1088	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	0	149	0	12	multi-exon	FALSE	canonical	3	426	junction_1	12.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTCCTTTATTTT	NA	False	NA	27	True	AATAAA	-39	NA	93404724	93407244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93405143_93405676_93405785_93406682
ES.14076.5	chr16	+	618	2	NNC	ENSMUSG00000051483.10	novel	1237	3	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCACAGAGGTTTACAA	NA	False	NA	2	True	AATAAA	-14	NA	93404761	93407219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93404865_93406704
ES.14077.1	chr16	+	2179	1	Intergenic	novelGene_11783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93414558	93416737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93414600_93416700
ES.14078.1	chr16	-	2185	1	Intergenic	novelGene_11784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACAGATTCACACAGGA	NA	False	NA	NA	False	NA	NA	NA	93467974	93465789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93465800_93468000
ES.14078.2	chr16	-	307	1	Intergenic	novelGene_11785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCTTGGTTTTGGTA	NA	False	NA	NA	False	NA	NA	NA	93467481	93467174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93467200_93467500
ES.14079.1	chr16	+	174	1	Intergenic	novelGene_11786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGGAACCAT	NA	False	NA	NA	False	NA	NA	NA	93469423	93469597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93469400_93469600
ES.1408.1	chr1	-	2580	1	Antisense	novelGene_ENSMUSG00000026429.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAATCCGGTCCCATATT	NA	False	NA	NA	False	NA	NA	NA	134895469	134892889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_134892900_134895500
ES.14080.1	chr16	+	1522	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	-345	-7	-345	7	multi-exon	FALSE	canonical	3	122	junction_2	11	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTGTTTGTTTT	NA	False	NA	27	True	ATTAAA	-29	NA	93479757	93487885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93480502_93481934_93482043_93487215
ES.14081.1	chr16	-	4465	2	Antisense	novelGene_ENSMUSG00000022947.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	3872	False	NA	NA	False	NA	NA	NA	93486418	93481891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_93486084_93486145
ES.14082.1	chr16	+	7308	37	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-13	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_4	15.285831210715	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508805	93607476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.10	chr16	+	7271	37	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	16.381731016932	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACACGTAATTGTCAT	NA	False	NA	12	True	AATAAA	-15	NA	93508828	93607468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573892_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.11	chr16	+	7209	37	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_32	16.0227461772859	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAATTGTCATGTGTAT	NA	False	NA	18	True	AATAAA	-21	NA	93508846	93607474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603275_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.12	chr16	+	6683	34	NIC	ENSMUSG00000022946.11	novel	7340	36	NA	NA	9929	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_29	16.2507893429819	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	4498	False	NA	20	True	AATAAA	-23	NA	93536915	93607476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603292_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.13	chr16	+	6278	28	NNC	ENSMUSG00000022946.11	novel	4703	23	NA	NA	-7670	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1092671765805	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	4117	False	NA	19	True	AATAAA	-22	NA	93551894	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93552292_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.14	chr16	+	4486	27	NNC	ENSMUSG00000022946.11	novel	4703	23	NA	NA	-7521	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5699142694933	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACACGTAATTGTCAT	4266	False	NA	12	True	AATAAA	-15	NA	93552043	93607468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93552292_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.15	chr16	+	3791	11	NNC	ENSMUSG00000022946.11	novel	4703	23	NA	NA	-7356	983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5470374987482	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTGTGCAATATGCAAA	4431	False	NA	NA	False	TATAAA	-13	NA	93552208	93568897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93552292_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633
ES.14082.17	chr16	+	5600	25	NNC	ENSMUSG00000022946.11	novel	4703	23	NA	NA	-2621	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5741288864078	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGTAATTGTCATGTG	9166	False	NA	15	True	AATAAA	-18	NA	93556943	93607471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93557152_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603292_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.19	chr16	+	1793	3	ISM	ENSMUSG00000022946.11	ENSMUST00000226836.2	2182	6	1222	3355	717	-3355	internal_fragment	FALSE	canonical	3	27	junction_1	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCACTGTGTGGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	93560786	93564559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93560933_93562325_93562427_93563013
ES.14082.2	chr16	+	1153	4	FSM	ENSMUSG00000022946.11	ENSMUST00000226335.2	1189	4	-1	37	-1	-37	multi-exon	FALSE	canonical	3	21	junction_1	5.24933858267454	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATCTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93508817	93537525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856
ES.14082.20	chr16	+	1646	11	ISM	ENSMUSG00000022946.11	ENSMUST00000227156.2	7340	36	62985	10	295	-3	3prime_fragment	FALSE	canonical	3	20	junction_1	15.2607339273051	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACACGTAATTGTCAT	NA	False	NA	12	True	AATAAA	-15	NA	93589971	93607468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.21	chr16	+	1626	11	NNC	ENSMUSG00000022946.11	novel	1573	10	NA	NA	-1520	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2309169342371	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCACACGTAATTGTCA	3029	False	NA	11	True	AATAAA	-14	NA	93594201	93607467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93594331_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.22	chr16	+	1290	9	NNC	ENSMUSG00000022946.11	novel	1573	10	NA	NA	-84	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.4764206612675	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	5820	False	NA	19	True	AATAAA	-22	NA	93596992	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93597136_93598448_93598511_93600349_93600479_93603292_93603360_93604100_93604154_93604327_93604380_93604705_93604868_93606179_93606310_93606983
ES.14082.23	chr16	+	1779	6	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	2528	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	24.2107414178088	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	8432	False	NA	20	True	AATAAA	-23	NA	93599604	93607476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93600479_93603292_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.24	chr16	+	1485	6	ISM	ENSMUSG00000022946.11	ENSMUST00000227278.2	1573	10	4246	-1	2891	1	3prime_fragment	FALSE	canonical	3	49	junction_1	9.66229786334493	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	8795	False	NA	19	True	AATAAA	-22	NA	93599967	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.25	chr16	+	1286	7	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	2919	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.3466088165822	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTAATTGTCATGTGTA	8823	False	NA	17	True	AATAAA	-20	NA	93599995	93607473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93600028_93600126_93600479_93603292_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.26	chr16	+	1217	2	Genic_Genomic	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-4486	1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	NA	False	NA	19	True	AATAAA	-22	NA	93601835	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_93602251_93606673
ES.14082.27	chr16	+	1095	6	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-4145	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.7055951027947	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	NA	False	NA	19	True	AATAAA	-22	NA	93602176	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93602298_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.28	chr16	+	2440	3	NIC	ENSMUSG00000022946.11	novel	1573	10	NA	NA	-3157	-3	intron_retention	FALSE	canonical	3	68	junction_2	2.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACACGTAATTGTCAT	NA	False	NA	12	True	AATAAA	-15	NA	93603164	93607468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93604154_93604705_93604868_93606179
ES.14082.3	chr16	+	7161	37	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	15.1246875286568	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTAATTGTCATGTGTA	NA	False	NA	17	True	AATAAA	-20	NA	93508817	93607473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93607115
ES.14082.4	chr16	+	8927	36	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	16.3038495516881	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508817	93607476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93546275_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.5	chr16	+	2835	6	ISM	ENSMUSG00000022946.11	ENSMUST00000045004.11	7319	37	29	59472	-1	10442	intron_retention	FALSE	canonical	3	19	junction_4	5.44058820349418	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	93508820	93548004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011
ES.14082.6	chr16	+	7364	38	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	16.7903760392181	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATTGTCATGTGTATA	NA	False	NA	19	True	AATAAA	-22	NA	93508820	93607475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577260_93577336_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ES.14082.7	chr16	+	5925	28	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	-1	3661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	10.1122642131793	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAACATTTTGTTATAG	NA	False	NA	NA	False	NA	NA	NA	93508820	93581361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93580337_93580383_93581123
ES.14082.8	chr16	+	5864	27	NNC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	1	3647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	8.77462721944566	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGCACTTAAACAGGCA	NA	False	NA	NA	False	NA	NA	NA	93508822	93581347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93581123
ES.14083.1	chr16	-	289	1	Intergenic	novelGene_11787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	93518145	93517856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93517900_93518100
ES.14084.1	chr16	-	2508	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-12	872	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	34	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGCCTGAGTGGGCTCC	6559	False	NA	NA	False	NA	NA	NA	93591801	93588151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590208_93590397_93590505_93591456
ES.14084.10	chr16	-	2455	2	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	6407	False	NA	NA	False	AATAAA	-23	NA	93591953	93589028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590987_93591456
ES.14084.11	chr16	-	2269	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-105	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	6466	False	NA	NA	False	AATAAA	-23	NA	93591894	93589028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590397_93590987_93591456
ES.14084.12	chr16	-	1903	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	-334	11	-334	-11	multi-exon	FALSE	canonical	3	7	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGCATAACAAATACACC	6237	False	NA	NA	False	AATAAA	-17	NA	93592123	93589034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93590271_93591456
ES.14084.13	chr16	-	1777	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	-11	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	34	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGCATAACAAATACACC	6407	False	NA	NA	False	AATAAA	-17	NA	93591953	93589034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590208_93590397_93590505_93591456
ES.14084.14	chr16	-	1705	4	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	28	-12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	26.3986531642978	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGCATAACAAATACAC	6599	False	NA	NA	False	AATAAA	-16	NA	93591761	93589035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590397_93590505_93590928_93590987_93591456
ES.14084.15	chr16	-	1698	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-159	-148	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGCTGCGTGCTGTTGT	6412	False	NA	NA	False	NA	NA	NA	93591948	93589171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590397_93590505_93591456
ES.14084.16	chr16	-	1668	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	-240	152	-240	-152	multi-exon	FALSE	canonical	3	7	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACAGTGCTGCGTGCTG	6331	False	NA	NA	False	NA	NA	NA	93592029	93589175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93590271_93591456
ES.14084.17	chr16	-	1508	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-93	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACAGTGCTGCGTGCT	6478	False	NA	NA	False	NA	NA	NA	93591882	93589176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590208_93590453_93590505_93591456
ES.14084.2	chr16	-	2813	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-254	872	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGCCTGAGTGGGCTCC	6317	False	NA	NA	False	NA	NA	NA	93592043	93588151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590397_93590505_93591456
ES.14084.3	chr16	-	2595	4	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-628	857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.0647565729573	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAGTTCACATAAGCA	5943	False	NA	NA	False	NA	NA	NA	93592417	93588166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590453_93590505_93591456_93591715_93592235
ES.14084.4	chr16	-	2337	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	100	-857	100	857	multi-exon	FALSE	canonical	3	7	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAGTTCACATAAGCA	6671	False	NA	NA	False	NA	NA	NA	93591689	93588166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93590271_93591456
ES.14084.5	chr16	-	2398	4	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-14	852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8870119584549	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTTAGTTCACAT	6557	False	NA	NA	False	NA	NA	NA	93591803	93588171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93589750_93589904_93590271_93590397_93590505_93591456
ES.14084.6	chr16	-	1744	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-164	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATATAAGAAGAAACA	6407	False	NA	NA	False	AATAAA	-40	NA	93591953	93589011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590208_93590453_93590505_93591456
ES.14084.7	chr16	-	1621	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	6576	False	NA	NA	False	AATAAA	-23	NA	93591784	93589028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590453_93590505_93591456
ES.14084.8	chr16	-	1865	2	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-56	-5	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	6515	False	NA	NA	False	AATAAA	-23	NA	93591845	93589028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590505_93591456
ES.14084.9	chr16	-	2043	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	-361	-5	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	6210	False	NA	NA	False	AATAAA	-23	NA	93592150	93589028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93590271_93590397_93590505_93591456
ES.14085.1	chr16	+	4344	18	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-10194	27	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	231.298650545014	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGATTTTCTCTTGA	NA	False	NA	43	True	GATAAA	-24	NA	93618814	93672988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93618969_93628811_93629022_93638258_93638332_93641081_93641215_93642027_93642243_93644168_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.10	chr16	+	4198	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-22	7	intron_retention	FALSE	non_canonical	1	193	junction_4	110.515639918822	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGTTATTTCCTTA	1066	False	NA	23	True	AATAAA	-34	NA	93629100	93672968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.11	chr16	+	4187	18	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-22	4	combination_of_known_junctions	TRUE	non_canonical	1	16	junction_3	200.230766521011	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1066	False	NA	20	True	AATAAA	-31	NA	93629100	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.12	chr16	+	2892	16	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-20	1083	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_15	180.937730233974	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTAAAAAAAAAGATACT	1068	False	NA	NA	False	NA	NA	NA	93629102	93668673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93668393
ES.14085.16	chr16	+	4084	17	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1071	False	NA	20	True	AATAAA	-31	NA	93629105	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642246_93644175_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.17	chr16	+	4082	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1073	False	NA	14	True	AATAAA	-25	NA	93629107	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644157_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.19	chr16	+	3151	15	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	102	4273	-12	1097	5prime_fragment	FALSE	non_canonical	1	193	junction_4	115.502628294152	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTGAATATCATCCTCT	1076	False	NA	NA	False	NA	NA	NA	93629110	93668687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251
ES.14085.2	chr16	+	4242	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	-32	-32	-32	31	multi-exon	FALSE	non_canonical	1	193	junction_4	108.324454764379	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTTTCTCTTGAGTTG	942	False	NA	47	True	GATAAA	-28	NA	93628976	93672992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.21	chr16	+	4048	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-12	4	combination_of_known_junctions	FALSE	non_canonical	1	16	junction_11	173.766186296414	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1076	False	NA	20	True	AATAAA	-31	NA	93629110	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.22	chr16	+	4233	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	202.586493126348	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1077	False	NA	15	True	AATAAA	-26	NA	93629111	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641778_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.23	chr16	+	3248	17	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	278.056698073882	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1078	False	NA	13	True	AATAAA	-24	NA	93629112	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642243_93644168_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93670124_93670283_93671646
ES.14085.24	chr16	+	4076	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	152.272050435233	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1078	False	NA	14	True	AATAAA	-25	NA	93629112	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642239_93644163_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.25	chr16	+	4627	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-8	-167	intron_retention	FALSE	non_canonical	1	76	junction_3	161.933194172782	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTTTTATTGTTGCTA	1080	False	NA	NA	False	ACTAAA	-16	NA	93629114	93672793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.26	chr16	+	4133	18	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.806388697147	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	1080	False	NA	16	True	AATAAA	-27	NA	93629114	93672961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.27	chr16	+	5902	17	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-8	1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_4	151.11254084291	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTAACTGAAAGTTATT	1080	False	NA	17	True	AATAAA	-28	NA	93629114	93672962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93643795_93643894_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.29	chr16	+	5809	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-7	6	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_15	175.965273118732	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGAAAGTTATTTCCTT	1081	False	NA	22	True	AATAAA	-33	NA	93629115	93672967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93668393_93670283_93671646
ES.14085.30	chr16	+	3583	13	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-7	12	at_least_one_novel_splicesite	FALSE	non_canonical	1	16	junction_5	236.284242080498	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTATTTCCTTACGAAG	1081	False	NA	28	True	AATAAA	-39	NA	93629115	93672973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.32	chr16	+	4137	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_12	176.632917373858	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTACTCGATAAAGGTAA	1086	False	NA	5	True	AATAAA	-16	NA	93629120	93672950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659685_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.33	chr16	+	4180	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.645244480096	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1086	False	NA	13	True	AATAAA	-24	NA	93629120	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93647603_93647720_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.34	chr16	+	4030	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	200.701543030939	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1086	False	NA	13	True	AATAAA	-24	NA	93629120	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644189_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.35	chr16	+	3933	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_2	178.406078620906	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1086	False	NA	15	True	AATAAA	-26	NA	93629120	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.37	chr16	+	9048	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	4	intron_retention	FALSE	non_canonical	1	193	junction_4	111.022640333702	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1088	False	NA	20	True	AATAAA	-31	NA	93629122	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.38	chr16	+	4884	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	1	4	intron_retention	FALSE	non_canonical	1	3	junction_16	257.670090294791	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1089	False	NA	20	True	AATAAA	-31	NA	93629123	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93668393_93668521_93670124_93670283_93671646
ES.14085.39	chr16	+	3872	16	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_7	180.287129016158	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1089	False	NA	13	True	AATAAA	-24	NA	93629123	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93652372_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.4	chr16	+	3940	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	76	162	-38	-162	multi-exon	FALSE	non_canonical	1	193	junction_4	108.324454764379	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTGTTGCTATTTAT	1050	False	NA	NA	False	ACTAAA	-21	NA	93629084	93672798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.40	chr16	+	4053	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	200.701543030939	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1091	False	NA	15	True	AATAAA	-26	NA	93629125	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642246_93644175_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.43	chr16	+	6003	16	NIC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	8	18	intron_retention	FALSE	canonical	3	512	junction_10	44.9115674285466	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTTACGAAGCTGATT	1096	False	NA	34	True	AATAAA	-45	NA	93629130	93672979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.44	chr16	+	3894	16	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	208.972087450294	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1096	False	NA	15	True	AATAAA	-26	NA	93629130	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642243_93644168_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93667251_93668141_93670124_93670283_93671646
ES.14085.45	chr16	+	4178	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	213.813002410985	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCGATAAAGGTAACTGA	1096	False	NA	9	True	AATAAA	-20	NA	93629130	93672954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93669394_93669523_93670124_93670283_93671646
ES.14085.46	chr16	+	3861	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	8	-162	combination_of_known_junctions	FALSE	non_canonical	1	16	junction_11	173.766186296414	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTGTTGCTATTTAT	1096	False	NA	NA	False	ACTAAA	-21	NA	93629130	93672798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.48	chr16	+	4119	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	212.258655946516	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	1097	False	NA	16	True	AATAAA	-27	NA	93629131	93672961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93651104_93651168_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.49	chr16	+	2024	8	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	126	21218	-10	-1078	5prime_fragment	FALSE	non_canonical	1	193	junction_4	154.614596559923	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGGGCCTATGTTAGT	1100	False	NA	NA	False	NA	NA	NA	93629134	93651742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666
ES.14085.50	chr16	+	4801	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-10	26	intron_retention	FALSE	non_canonical	1	76	junction_3	161.933194172782	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAAGCTGATTTTCTCTTG	1100	False	NA	42	True	GATAAA	-23	NA	93629134	93672987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.51	chr16	+	3870	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	non_canonical	1	5	junction_5	223.014140059922	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1100	False	NA	14	True	AATAAA	-25	NA	93629134	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.54	chr16	+	4037	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_3	175.313246433349	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1101	False	NA	13	True	AATAAA	-24	NA	93629135	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642039_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.55	chr16	+	4079	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	175.995638706617	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1101	False	NA	13	True	AATAAA	-24	NA	93629135	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649946_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.56	chr16	+	4612	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-9	0	intron_retention	FALSE	non_canonical	1	193	junction_4	111.614017439069	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1101	False	NA	15	True	AATAAA	-26	NA	93629135	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.57	chr16	+	3153	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-9	-9	combination_of_known_splicesites	FALSE	non_canonical	1	3	junction_14	182.044927299707	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTCGATAAAGGTAAC	1101	False	NA	6	True	AATAAA	-17	NA	93629135	93672951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93670124_93670283_93671646
ES.14085.58	chr16	+	4208	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	213.253102704624	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1101	False	NA	20	True	AATAAA	-31	NA	93629135	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93669558_93669711_93670124_93670283_93671646
ES.14085.61	chr16	+	5567	16	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	7	intron_retention	FALSE	non_canonical	1	193	junction_4	111.022640333702	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGTTATTTCCTTA	1110	False	NA	23	True	AATAAA	-34	NA	93629144	93672968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.62	chr16	+	2448	4	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	276.725294992866	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGATAAAGGTAACTGAA	1110	False	NA	10	True	AATAAA	-21	NA	93629144	93672955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93667251_93668141_93670124_93670283_93671646
ES.14085.64	chr16	+	4697	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	660	at_least_one_novel_splicesite	FALSE	non_canonical	1	25	junction_15	172.175044921586	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTTTGAAGTGTTTT	1110	False	NA	NA	False	NA	NA	NA	93629144	93673621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.65	chr16	+	4001	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.236006546188	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1111	False	NA	15	True	AATAAA	-26	NA	93629145	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642229_93644163_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.67	chr16	+	3968	18	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	-165	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	222.286124414608	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTATTGTTGCTATT	1116	False	NA	NA	False	ACTAAA	-18	NA	93629150	93672795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642243_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.68	chr16	+	5683	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	213.113547394446	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	1117	False	NA	15	True	AATAAA	-26	NA	93629151	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93668393_93670042_93670124_93670283_93671646
ES.14085.69	chr16	+	3163	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	144	871	-2	-871	multi-exon	FALSE	non_canonical	1	193	junction_4	108.324454764379	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCTCCCTAAATGTAT	1118	False	NA	NA	False	AATACA	-14	NA	93629152	93672089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.7	chr16	+	4082	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	200.701543030939	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGATAAAGGTAACTGAA	1062	False	NA	10	True	AATAAA	-21	NA	93629096	93672955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642239_93644163_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.70	chr16	+	2987	13	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2	-2869	intron_retention	FALSE	non_canonical	1	193	junction_4	123.157391396357	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACTAGGAAACTATGA	1118	False	NA	NA	False	NA	NA	NA	93629152	93664636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659604_93661847_93661906_93663262
ES.14085.71	chr16	+	3597	14	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	167.763852063463	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTACTCGATAAAGGTAA	1121	False	NA	5	True	AATAAA	-16	NA	93629155	93672950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642243_93650665_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.72	chr16	+	3551	14	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	3	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	167.763852063463	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTTACGAAGCTGATT	1123	False	NA	34	True	AATAAA	-45	NA	93629157	93672979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93650737_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.73	chr16	+	4717	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	3	-1	intron_retention	FALSE	non_canonical	1	16	junction_11	206.393094300657	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1123	False	NA	14	True	AATAAA	-25	NA	93629157	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.74	chr16	+	6102	15	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	5	-3	intron_retention	FALSE	non_canonical	1	193	junction_4	114.573588330196	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGATAAAGGTAACTGAAAG	1125	False	NA	12	True	AATAAA	-23	NA	93629159	93672957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.78	chr16	+	4240	19	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	260.401642529572	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	1132	False	NA	13	True	AATAAA	-24	NA	93629166	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93668393_93668521_93669394_93669523_93670124_93670283_93671646
ES.14085.79	chr16	+	3702	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	171.732269298286	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1134	False	NA	20	True	AATAAA	-31	NA	93629168	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93667481_93667801_93668141_93670124_93670283_93671646
ES.14085.8	chr16	+	3159	15	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-26	1097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	184.654683235537	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTGAATATCATCCTCT	1062	False	NA	NA	False	NA	NA	NA	93629096	93668687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641087_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251
ES.14085.80	chr16	+	5388	17	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.236006546188	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	1138	False	NA	20	True	AATAAA	-31	NA	93629172	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93643722_93644247_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.84	chr16	+	3602	18	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	24	18	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_15	171.546234953273	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTTACGAAGCTGATT	1144	False	NA	34	True	AATAAA	-45	NA	93629178	93672979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93667481_93667905_93668141_93670124_93670283_93671646
ES.14085.85	chr16	+	8005	13	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	24	-1	intron_retention	FALSE	non_canonical	1	193	junction_4	121.38674991759	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	1144	False	NA	14	True	AATAAA	-25	NA	93629178	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93652402_93657380_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.86	chr16	+	4996	17	NNC	ENSMUSG00000039456.11	novel	726	6	NA	NA	103	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	174.028362900276	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGAAAGTTATTTCCT	1223	False	NA	21	True	AATAAA	-32	NA	93629257	93672966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93630298_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.87	chr16	+	3878	15	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	12071	1	-432	-1	3prime_fragment	FALSE	non_canonical	1	193	junction_2	109.571242316847	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGGTAACTGAAAGTT	NA	False	NA	14	True	AATAAA	-25	NA	93641079	93672959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.88	chr16	+	4637	14	NNC	ENSMUSG00000039456.11	novel	726	6	NA	NA	-1204	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.076612755718	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATAAAGGTAACTGAAAGT	NA	False	NA	13	True	AATAAA	-24	NA	93642960	93672958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93643770_93643869_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.89	chr16	+	8394	12	NIC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	92	4	intron_retention	FALSE	canonical	3	16	junction_6	169.512572975264	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	NA	False	NA	20	True	AATAAA	-31	NA	93644256	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.9	chr16	+	4097	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-22	16	at_least_one_novel_splicesite	FALSE	non_canonical	1	25	junction_15	172.175044921586	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTTACGAAGCTGA	1066	False	NA	32	True	AATAAA	-43	NA	93629100	93672977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.90	chr16	+	3239	11	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	1887	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	180.117211837181	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGATAAAGGTAACTGAAAG	NA	False	NA	12	True	AATAAA	-23	NA	93646051	93672957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.91	chr16	+	4298	11	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	19896	7	-1765	-7	3prime_fragment	FALSE	canonical	3	512	junction_5	40.890707990936	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTCGATAAAGGTAACTG	NA	False	NA	8	True	AATAAA	-19	NA	93648904	93672953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.92	chr16	+	5102	8	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-385	-5	intron_retention	FALSE	canonical	3	546	junction_3	35.0364241955163	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGATAAAGGTAACTGAA	NA	False	NA	10	True	AATAAA	-21	NA	93650284	93672955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93652402_93657380_93657486_93659301_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.93	chr16	+	1773	6	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	23355	8324	1694	-2869	internal_fragment	FALSE	canonical	3	512	junction_3	51.8459255872629	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACTAGGAAACTATGA	NA	False	NA	NA	False	NA	NA	NA	93652363	93664636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262
ES.14085.94	chr16	+	5756	7	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	-2786	0	intron_retention	FALSE	canonical	3	546	junction_2	35.0891721190455	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	NA	False	NA	15	True	AATAAA	-26	NA	93654614	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93657486_93659301_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ES.14085.95	chr16	+	179	1	Intergenic	novelGene_11789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	604	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	93655116	93655295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93655100_93655300
ES.14085.96	chr16	+	4119	9	NNC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	-1205	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	290.224374407113	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTGAAAGTTATTTCC	NA	False	NA	20	True	AATAAA	-31	NA	93656195	93672965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93657486_93658634_93658717_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670130_93670283_93671646
ES.14085.97	chr16	+	6174	6	FSM	ENSMUSG00000039456.11	ENSMUST00000232639.2	726	6	3	-5451	3	-4	multi-exon	FALSE	canonical	3	16	junction_2	234.091947747034	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCGATAAAGGTAACTGAAA	NA	False	NA	11	True	AATAAA	-22	NA	93657403	93672956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251
ES.14085.98	chr16	+	4108	3	ISM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	36496	0	8104	0	3prime_fragment	FALSE	canonical	3	566	junction_1	20	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	NA	False	NA	15	True	AATAAA	-26	NA	93665504	93672960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93668141_93670124_93670283_93671646
ES.14085.99	chr16	+	4317	2	NIC	ENSMUSG00000039456.11	novel	4179	17	NA	NA	9911	31	intron_retention	FALSE	canonical	3	606	junction_1	0	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTTTCTCTTGAGTTG	NA	False	NA	47	True	GATAAA	-28	NA	93667311	93672992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93670283_93671646
ES.14086.1	chr16	-	415	2	Intergenic	novelGene_11788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGACCCTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93623355	93622846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93623188_93623281
ES.14087.1	chr16	-	290	1	Intergenic	novelGene_11790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAATAATATAGCTTA	NA	False	NA	NA	False	NA	NA	NA	93661058	93660768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93660800_93661100
ES.14088.1	chr16	-	1133	1	Intergenic	novelGene_11791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGCCAGAGCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	93680054	93678921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93678900_93680100
ES.14089.1	chr16	+	1950	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	-33	5	-33	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4333	False	NA	16	True	AATAAA	-24	NA	93680755	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.10	chr16	+	3179	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	827	junction_1	47.7571335158727	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4379	False	NA	21	True	AATAAA	-29	NA	93680801	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.11	chr16	+	1930	14	FSM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	-3	-33	-3	0	multi-exon	FALSE	canonical	3	16	junction_1	247.655157271309	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4386	False	NA	16	True	AATAAA	-24	NA	93680808	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93680864_93681320_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.12	chr16	+	2634	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	827	junction_1	48.3864650496397	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4386	False	NA	16	True	AATAAA	-24	NA	93680808	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.13	chr16	+	2435	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	827	junction_1	51.3717388800063	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4386	False	NA	21	True	AATAAA	-29	NA	93680808	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.14	chr16	+	3655	11	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	874	junction_1	39.393400462514	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4388	False	NA	16	True	AATAAA	-24	NA	93680810	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.15	chr16	+	3237	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	15	junction_6	265.476244443145	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAGTGTGTGTGCTGA	4388	False	NA	14	True	AATAAA	-22	NA	93680810	93702996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689788_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.16	chr16	+	4861	11	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	827	junction_1	53.5358758217328	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4388	False	NA	21	True	AATAAA	-29	NA	93680810	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.17	chr16	+	3810	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	827	junction_1	52.5660299052535	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4389	False	NA	21	True	AATAAA	-29	NA	93680811	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.18	chr16	+	2301	8	ISM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	28	11823	-2	4	5prime_fragment	FALSE	canonical	3	827	junction_1	65.8975704857043	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATAGCATGTGTA	4394	False	NA	NA	False	NA	NA	NA	93680816	93691180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619
ES.14089.19	chr16	+	6079	9	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	876	junction_3	28.9242005075335	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4396	False	NA	16	True	AATAAA	-24	NA	93680818	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.2	chr16	+	3005	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-33	0	intron_retention	FALSE	canonical	3	827	junction_1	53.4287197972547	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4333	False	NA	21	True	AATAAA	-29	NA	93680755	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.20	chr16	+	1577	12	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	353.478815103922	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATAGAAAAAGTGTGTGT	4396	False	NA	9	True	AATAAA	-17	NA	93680818	93702991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93680864_93684009_93684114_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.21	chr16	+	4826	11	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	874	junction_2	40.8246249217308	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4396	False	NA	21	True	AATAAA	-29	NA	93680818	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.22	chr16	+	1870	14	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	245.202271290773	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAGTGTGTGTGCTGA	4397	False	NA	14	True	AATAAA	-22	NA	93680819	93702996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684114_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.23	chr16	+	3678	12	ISM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	31	2669	1	-2631	5prime_fragment	FALSE	canonical	3	827	junction_1	56.6761132945954	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTCTTTCAAAGTCTA	4397	False	NA	NA	False	AATACA	-15	NA	93680819	93700334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812
ES.14089.24	chr16	+	4327	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	827	junction_1	51.1628416298036	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4400	False	NA	16	True	AATAAA	-24	NA	93680822	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.25	chr16	+	5264	10	NIC	ENSMUSG00000022945.13	novel	1894	14	NA	NA	9	-4	intron_retention	FALSE	canonical	3	876	junction_4	36.6417423705617	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAAAGTGTGTGTGCT	4405	False	NA	12	True	AATAAA	-20	NA	93680827	93702994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.26	chr16	+	1719	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	258.426152679811	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAGTGTGTGTGCTGA	4406	False	NA	14	True	AATAAA	-22	NA	93680828	93702996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.27	chr16	+	3087	12	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	13	0	intron_retention	FALSE	canonical	1	12	junction_2	261.84488500189	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4409	False	NA	16	True	AATAAA	-24	NA	93680831	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93682380_93684009_93684114_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.28	chr16	+	5227	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	14	0	intron_retention	FALSE	canonical	3	827	junction_1	53.194807077383	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4410	False	NA	16	True	AATAAA	-24	NA	93680832	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.29	chr16	+	1944	14	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	2	15	junction_8	248.01670109827	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGTGTGTGTGCTGAC	4412	False	NA	15	True	AATAAA	-23	NA	93680834	93702997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689788_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.3	chr16	+	3559	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	827	junction_1	52.4030188909846	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4354	False	NA	16	True	AATAAA	-24	NA	93680776	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93681510_93682246_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.31	chr16	+	1854	14	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	251.931309319395	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4420	False	NA	16	True	AATAAA	-24	NA	93680842	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689705_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.32	chr16	+	4228	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	26	0	intron_retention	FALSE	canonical	3	827	junction_1	48.8189436202623	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4422	False	NA	16	True	AATAAA	-24	NA	93680844	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.33	chr16	+	4719	11	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	30	0	intron_retention	FALSE	canonical	3	863	junction_4	41.049360530951	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4426	False	NA	21	True	AATAAA	-29	NA	93680848	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.34	chr16	+	2418	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	33	0	intron_retention	FALSE	canonical	2	15	junction_7	257.995303036487	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4429	False	NA	16	True	AATAAA	-24	NA	93680851	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689788_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.35	chr16	+	2344	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	33	0	intron_retention	FALSE	canonical	3	863	junction_6	46.2174810602607	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4429	False	NA	16	True	AATAAA	-24	NA	93680851	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.36	chr16	+	3076	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	38	0	intron_retention	FALSE	canonical	3	863	junction_5	42.1584966877996	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4434	False	NA	16	True	AATAAA	-24	NA	93680856	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.37	chr16	+	3600	11	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	38	0	intron_retention	FALSE	canonical	1	12	junction_2	274.448191832266	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4434	False	NA	21	True	AATAAA	-29	NA	93680856	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93682380_93684009_93684114_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.38	chr16	+	2877	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	38	0	intron_retention	FALSE	canonical	3	874	junction_2	43.3660186119032	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4434	False	NA	21	True	AATAAA	-29	NA	93680856	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.39	chr16	+	3012	5	ISM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	2151	11785	1873	4	internal_fragment	FALSE	canonical	3	863	junction_4	51.3145934408527	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATAGCATGTGTA	6540	False	NA	NA	False	NA	NA	NA	93682962	93691180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619
ES.14089.4	chr16	+	2010	14	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	336.877323904336	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTGTGCTGACT	4354	False	NA	16	True	AATAAA	-24	NA	93680776	93702998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689094_93689619_93689788_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ES.14089.40	chr16	+	9188	5	NNC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-2004	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	404.877759329899	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAGTGTGTGTGCTGA	4385	False	NA	14	True	AATAAA	-22	NA	93687624	93702996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93691695_93691782_93691875_93696910_93697074_93697812_93701178_93701498
ES.14089.9	chr16	+	7682	12	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	827	junction_1	48.733547764204	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4379	False	NA	21	True	AATAAA	-29	NA	93680801	93703003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_93680864_93681353_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93697074_93697812_93698245_93701893_93701986_93702792
ES.1409.1	chr1	-	6127	37	NIC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_36	4.29793231940921	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	0	True	AATAAA	-19	NA	135058899	135036234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822_135037900_135037989_135038069_135038150_135038239_135038387_135038456_135038783_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048262_135048439_135048704_135050069_135050343_135051276_135051553_135051685_135051932_135052032_135052288_135052980_135053245_135053442_135053713_135053873_135054147_135054314_135054364_135054753_135054821_135055774_135055852_135056391_135056460_135056854_135057489_135058806
ES.1409.10	chr1	-	202	1	Genic_Genomic	ENSMUSG00000097993.8	novel	NA	NA	NA	NA	-201	-377	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGTGAGGAAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	135039485	135039283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135039300_135039500
ES.1409.2	chr1	-	5172	29	NIC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	2050	0	intron_retention	FALSE	canonical	1	1	junction_28	4.34644471179067	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGTCTGCTTCTGCA	NA	False	NA	0	True	AATAAA	-19	NA	135053950	135036234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037900_135037989_135038239_135038387_135038456_135038783_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048262_135048439_135048704_135050069_135050343_135051276_135051553_135051685_135051932_135052032_135052288_135052980_135053245_135053442_135053713_135053873
ES.1409.3	chr1	-	4814	18	NNC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	5580	0	intron_retention	FALSE	canonical	0	0	junction_9	4.80123974762632	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTGTGTCTGCTTCTGC	NA	False	NA	-1	True	AATAAA	-18	NA	135050420	135036235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135036434_135036656_135037188_135037300_135038239_135038387_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042127_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048704_135050069
ES.1409.6	chr1	-	808	6	NNC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	237	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	5.70613704707484	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGTTGTGTCTGCTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	135037965	135036237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037899
ES.1409.7	chr1	-	1714	1	NIC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	247	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGGTTGTGTCTGC	NA	False	NA	-7	True	AATAAA	-12	NA	135037955	135036241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135036200_135038000
ES.1409.8	chr1	-	2838	22	NNC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	5887	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	4.58331787257751	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGGTTGTGTCTGC	NA	False	NA	-7	True	AATAAA	-12	NA	135050113	135036241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135036434_135036656_135037188_135037300_135037418_135037546_135037676_135037822_135037900_135037989_135038069_135038150_135038239_135038387_135038456_135038783_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047093_135048587_135048704_135050069
ES.1409.9	chr1	-	9120	32	NNC	ENSMUSG00000097993.8	novel	6108	37	NA	NA	619	-4	intron_retention	TRUE	non_canonical	0	0	junction_9	4.55604480056615	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGGTTGTGTCTGC	NA	False	NA	-7	True	AATAAA	-12	NA	135058282	135036241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037900_135037989_135038239_135038387_135038456_135038783_135038920_135039039_135039278_135039489_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048262_135048439_135048704_135050069_135050343_135051276_135051553_135051685_135051932_135052032_135052288_135052980_135053245_135053442_135053713_135053873_135054147_135054314_135054364_135054753_135054821_135055774_135055852_135056391_135056460_135056854
ES.14090.1	chr16	-	185	1	Intergenic	novelGene_11792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAGAGAG	8958	False	NA	NA	False	NA	NA	NA	93712944	93712759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93712800_93712900
ES.14091.1	chr16	+	1764	1	Intergenic	novelGene_11793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	93775565	93777329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93775600_93777300
ES.14091.2	chr16	+	637	2	Antisense	novelGene_ENSMUSG00000047109.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	93776488	93777329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_93776580_93776783
ES.14092.1	chr16	+	183	1	Intergenic	novelGene_11794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAAGTTGTGGGCTCTG	4549	False	NA	NA	False	NA	NA	NA	93803428	93803611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93803400_93803600
ES.14093.1	chr16	+	2718	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-716	1921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGCGTGATTCACTCGG	2148	False	NA	22	True	NA	NA	NA	93811583	93815016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93814317_93814366
ES.14093.10	chr16	+	1470	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-616	1915	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	127	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2248	False	NA	16	True	NA	NA	NA	93811683	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93813060_93814572
ES.14093.11	chr16	+	2825	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-600	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.036579926459	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2264	False	NA	17	True	NA	NA	NA	93811699	93815011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811958_93812050_93812370_93812713_93814317_93814366
ES.14093.12	chr16	+	947	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2290	False	NA	15	True	NA	NA	NA	93811725	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812394_93814409
ES.14093.13	chr16	+	1216	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2290	False	NA	16	True	NA	NA	NA	93811725	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814409
ES.14093.14	chr16	+	759	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-572	1915	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	104	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2292	False	NA	16	True	NA	NA	NA	93811727	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93814572
ES.14093.15	chr16	+	2837	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-570	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2294	False	NA	16	True	NA	NA	NA	93811729	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93814317_93814416
ES.14093.16	chr16	+	1265	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-570	1914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2294	False	NA	15	True	NA	NA	NA	93811729	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93813010_93814359
ES.14093.17	chr16	+	1224	5	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-569	41	multi-exon	FALSE	canonical	2	10	junction_4	93.8199738861614	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATAATGTG	2295	False	NA	NA	False	NA	NA	NA	93811730	93817224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93811971_93812291_93812370_93814572_93814651_93815229_93815317_93816483
ES.14093.19	chr16	+	3635	2	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-551	2388	intron_retention	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTAATTCCCATATC	2313	False	NA	NA	False	NA	NA	NA	93811748	93815483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93814317_93814416
ES.14093.2	chr16	+	1464	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-664	1915	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_2	43.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2200	False	NA	16	True	NA	NA	NA	93811635	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93813006_93814572
ES.14093.20	chr16	+	1942	2	FSM	ENSMUSG00000116947.2	ENSMUST00000231382.2	452	2	-533	-957	-533	957	multi-exon	FALSE	canonical	3	261	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCGAGTAGTACTCCA	2331	False	NA	NA	False	NA	NA	NA	93811766	93814052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93812370_93812713
ES.14093.21	chr16	+	1705	4	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-524	41	multi-exon	FALSE	canonical	3	16	junction_3	101.411154328418	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATAATGTG	2340	False	NA	NA	False	NA	NA	NA	93811775	93817224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93812370_93812713_93813006_93814572_93814651_93816483
ES.14093.22	chr16	+	1035	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-503	1914	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	113.520433794489	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2361	False	NA	15	True	NA	NA	NA	93811796	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93813060_93814572
ES.14093.23	chr16	+	1519	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-502	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2362	False	NA	16	True	NA	NA	NA	93811797	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93813010_93814359
ES.14093.24	chr16	+	2035	2	FSM	ENSMUSG00000116947.2	ENSMUST00000231382.2	452	2	-502	-1081	-502	1081	multi-exon	FALSE	canonical	3	261	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATGTGTCCTTCTTACA	2362	False	NA	NA	False	NA	NA	NA	93811797	93814176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_93812370_93812713
ES.14093.25	chr16	+	958	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-500	1915	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	94.4681016122491	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2364	False	NA	16	True	NA	NA	NA	93811799	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812349_93812713_93813006_93814572
ES.14093.27	chr16	+	1421	6	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-474	41	multi-exon	FALSE	canonical	2	10	junction_5	107.023361935607	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATAATGTG	2390	False	NA	NA	False	NA	NA	NA	93811825	93817224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572_93814651_93815229_93815317_93816483
ES.14093.28	chr16	+	2764	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1915	intron_retention	FALSE	non_canonical	0	0	junction_2	116	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2390	False	NA	16	True	NA	NA	NA	93811825	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93814317_93814416
ES.14093.29	chr16	+	1167	2	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	1913	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCCTGGCTCCGCGTGAT	2390	False	NA	14	True	NA	NA	NA	93811825	93815008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812394_93814409
ES.14093.3	chr16	+	1137	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-658	1915	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2206	False	NA	16	True	NA	NA	NA	93811641	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
ES.14093.30	chr16	+	2865	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-474	2388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTAATTCCCATATC	2390	False	NA	NA	False	NA	NA	NA	93811825	93815483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93814317_93814366
ES.14093.31	chr16	+	2340	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-473	1914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2391	False	NA	15	True	NA	NA	NA	93811826	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93814317_93814416
ES.14093.32	chr16	+	1681	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-473	1077	at_least_one_novel_splicesite	FALSE	canonical	3	232	junction_1	14.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCATGTGTCCTTCT	2391	False	NA	NA	False	NA	NA	NA	93811826	93814172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713
ES.14093.33	chr16	+	1181	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-473	1914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3847763108502	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2391	False	NA	15	True	NA	NA	NA	93811826	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93813060_93813242_93813497_93814572
ES.14093.34	chr16	+	1561	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-473	957	at_least_one_novel_splicesite	FALSE	canonical	3	232	junction_1	14.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCGAGTAGTACTCCA	2391	False	NA	NA	False	NA	NA	NA	93811826	93814052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713
ES.14093.35	chr16	+	4618	3	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-473	54	multi-exon	FALSE	non_canonical	0	0	junction_2	19.5	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAGTCCATGAATGT	2391	False	NA	NA	False	NA	NA	NA	93811826	93817237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93811971_93812713_93814317_93814366
ES.14093.36	chr16	+	2816	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-472	1915	intron_retention	FALSE	non_canonical	0	0	junction_2	5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2392	False	NA	16	True	NA	NA	NA	93811827	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812025_93812291_93814317_93814416
ES.14093.37	chr16	+	725	2	Intergenic	novelGene_11795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	197	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2411	False	NA	16	True	NA	NA	NA	93811846	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_93811971_93814409
ES.14093.38	chr16	+	834	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-433	1915	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	67.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2431	False	NA	16	True	NA	NA	NA	93811866	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93813006_93814572
ES.14093.39	chr16	+	2480	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-433	1914	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	120.748590974066	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2431	False	NA	15	True	NA	NA	NA	93811866	93815009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812025_93812291_93812370_93812713_93814367_93814418
ES.14093.4	chr16	+	2971	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-653	1916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2211	False	NA	17	True	NA	NA	NA	93811646	93815011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93814317_93814366
ES.14093.40	chr16	+	2434	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-433	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2431	False	NA	16	True	NA	NA	NA	93811866	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93814394_93814438
ES.14093.42	chr16	+	1446	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-429	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2435	False	NA	16	True	NA	NA	NA	93811870	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93813060_93814409
ES.14093.43	chr16	+	1277	7	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-429	-189	multi-exon	FALSE	canonical	1	1	junction_6	111.539853365911	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTCTACCATTTGA	2435	False	NA	NA	False	AATAAA	-21	NA	93811870	93816994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572_93814651_93815229_93815317_93816044_93816176_93816483
ES.14093.44	chr16	+	3041	2	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-429	1916	intron_retention	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCCGCGTGATTCA	2435	False	NA	17	True	NA	NA	NA	93811870	93815011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93814317_93814416
ES.14093.45	chr16	+	3743	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-429	3311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTAGGGTGTGTTCC	2435	False	NA	NA	False	AAGAAA	-1	NA	93811870	93816406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93814317_93814366
ES.14093.46	chr16	+	3100	4	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	-429	41	intron_retention	FALSE	non_canonical	0	0	junction_2	105.796450266013	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAATAATGTG	2435	False	NA	NA	False	NA	NA	NA	93811870	93817224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93811971_93812291_93814317_93814416_93814651_93816483
ES.14093.47	chr16	+	4718	2	Fusion	ENSMUSG00000116947.2_ENSMUSG00000116939.2	novel	452	2	NA	NA	170	54	multi-exon	FALSE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAGTCCATGAATGT	3034	False	NA	NA	False	NA	NA	NA	93812469	93817237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_+_93814317_93814366
ES.14093.5	chr16	+	1655	2	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-645	957	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	0	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCGAGTAGTACTCCA	2219	False	NA	NA	False	NA	NA	NA	93811654	93814052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713
ES.14093.6	chr16	+	2628	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-633	1915	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2231	False	NA	16	True	NA	NA	NA	93811666	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93814367_93814417
ES.14093.7	chr16	+	2549	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-631	1915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2233	False	NA	16	True	NA	NA	NA	93811668	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812713_93814317_93814366
ES.14093.8	chr16	+	2612	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-620	1913	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	116.802777744748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCCTGGCTCCGCGTGAT	2244	False	NA	14	True	NA	NA	NA	93811679	93815008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93811971_93812291_93812370_93812713_93814342_93814393
ES.14093.9	chr16	+	2933	3	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-617	1915	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	130.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCGCGTGATTC	2247	False	NA	16	True	NA	NA	NA	93811682	93815010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_93812370_93812713_93814352_93814402
ES.14094.1	chr16	-	2526	3	Intergenic	novelGene_11796	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAAAGTCCACTGGCTT	NA	False	NA	NA	False	NA	NA	NA	93816449	93813188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93814323_93814372_93815460_93816144
ES.14094.2	chr16	-	2271	3	Intergenic	novelGene_11797	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	128	False	NA	NA	False	NA	NA	NA	93816268	93813212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93814323_93814422_93815460_93816144
ES.14095.1	chr16	-	6076	5	Intergenic	novelGene_11798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.707106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAGCATTTCTATTCAA	NA	False	NA	NA	False	NA	NA	NA	93870103	93860045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93862886_93863660_93863742_93863982_93864059_93865982_93866057_93867098
ES.14096.1	chr16	+	175	1	Antisense	novelGene_ENSMUSG00000115044.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAAACATAGT	9646	False	NA	NA	False	NA	NA	NA	94020651	94020826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_94020700_94020800
ES.14097.1	chr16	+	3427	1	Antisense	novelGene_ENSMUSG00000040820.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3208	False	NA	NA	False	NA	NA	NA	94088446	94091873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_94088400_94091900
ES.14098.1	chr16	-	4598	9	NNC	ENSMUSG00000040820.17	novel	4833	10	NA	NA	20077	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.1898410623955	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTAATGGTATCTTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	94068638	93929739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93934267_93934364_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234
ES.14098.10	chr16	-	5110	10	NIC	ENSMUSG00000040820.17	novel	4021	11	NA	NA	-9	109	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	13.9505298806396	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCAGTCCATTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94091154	93930055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94090921
ES.14098.11	chr16	-	3538	6	NNC	ENSMUSG00000040820.17	novel	682	6	NA	NA	4627	109	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	18.062115047801	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCAGTCCATTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	93971232	93930055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_93971021
ES.14098.12	chr16	-	3854	3	NNC	ENSMUSG00000040820.17	novel	682	6	NA	NA	40721	109	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.5	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCAGTCCATTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	93935138	93930055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93934267
ES.14098.13	chr16	-	5131	11	NNC	ENSMUSG00000040820.17	novel	5371	11	NA	NA	-4344	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.518875692897	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGCAGTCCATTCT	NA	False	NA	NA	False	AATAAA	-14	NA	94118774	93930058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94118652
ES.14098.14	chr16	-	5141	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-13	-1107	-13	1	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTTTTATTTTTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	94091158	93930163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.15	chr16	-	5099	11	NNC	ENSMUSG00000040820.17	novel	4021	11	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.5961533719055	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTTTTTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	94091152	93930165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942206_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088685_94088786_94090921
ES.14098.17	chr16	-	4833	10	NNC	ENSMUSG00000040820.17	novel	4833	10	NA	NA	13676	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.243907079481	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAAAAATGTAAAC	NA	False	NA	NA	False	NA	NA	NA	94075039	93930188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94074950
ES.14098.18	chr16	-	4071	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-14	-36	-14	36	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTGACGTGTGTTTGA	NA	False	NA	NA	False	AATAAA	-27	NA	94091159	93931234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.19	chr16	-	3572	1	Intergenic	novelGene_11799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTCCCCCCCCTGGGA	NA	False	NA	NA	False	AATAAA	-32	NA	93952328	93948756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_93948800_93952300
ES.14098.2	chr16	-	5544	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	8	-1531	8	1	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTAATGGTATCTTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	94091137	93929739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.20	chr16	-	2135	6	FSM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-8	1261	8	-1261	multi-exon	FALSE	canonical	3	38	junction_5	3.26190128606002	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCAGCTTTTGTGGCTG	NA	False	NA	NA	False	ATTAAA	-30	NA	94091137	94031688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.21	chr16	-	2139	6	NNC	ENSMUSG00000040820.17	novel	5371	11	NA	NA	-6	-26312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.612815249019	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTGTCACGAACTGCAA	NA	False	NA	NA	False	NA	NA	NA	94091135	94056739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94057252_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.22	chr16	-	7255	5	NNC	ENSMUSG00000040820.17	novel	3388	6	NA	NA	44	-27310	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	13.8744369255116	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGTCTTGTTCCCC	NA	False	NA	NA	False	AATAAA	-20	NA	94091085	94057737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94063634_94068234_94069167_94069394_94069558_94088685_94088786_94090921
ES.14098.23	chr16	-	3890	4	ISM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-32	35387	-16	-35387	5prime_fragment	FALSE	canonical	3	38	junction_3	0.816496580927726	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTCTGCTCAATTTCG	NA	False	NA	NA	False	AATAAA	-20	NA	94091161	94065814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.24	chr16	-	3716	3	NIC	ENSMUSG00000040820.17	novel	3388	6	NA	NA	1	-35393	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	19.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGCTTCCTCTGCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	94091128	94065820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_94069167_94069394_94069558_94090921
ES.14098.25	chr16	-	3698	4	ISM	ENSMUSG00000040820.17	ENSMUST00000163193.9	5371	11	-8	136078	0	-35393	5prime_fragment	FALSE	canonical	1	2	junction_3	17.6823829464998	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGCTTCCTCTGCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	94114430	94065820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_94069167_94069394_94069558_94088650_94088786_94114376
ES.14098.26	chr16	-	3720	4	NNC	ENSMUSG00000040820.17	novel	3388	6	NA	NA	10541	-35395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.624953392932	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTAGCTTCCTCTGCT	NA	False	NA	NA	False	AATAAA	-12	NA	94103881	94065822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94069167_94069394_94069558_94088650_94088786_94103803
ES.14098.4	chr16	-	5596	11	NNC	ENSMUSG00000040820.17	novel	5371	11	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.518875692897	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGTTTTAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-15	NA	94090918	93929742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090647
ES.14098.5	chr16	-	5162	10	NIC	ENSMUSG00000040820.17	novel	5371	11	NA	NA	0	-82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	14.243907079481	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCGCTCGGAGACTCT	NA	False	NA	NA	False	CATAAA	-32	NA	94114430	93929824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94114376
ES.14098.6	chr16	-	5208	11	NNC	ENSMUSG00000040820.17	novel	4021	11	NA	NA	-5	111	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	11.5861986863682	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94091150	93930053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088685_94088786_94090921
ES.14098.7	chr16	-	5257	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	-19	-1217	-19	111	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94091164	93930053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.8	chr16	-	5180	12	NNC	ENSMUSG00000040820.17	novel	4021	11	NA	NA	-10	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8898704543753	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94091155	93930053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_93931844_93931911_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ES.14098.9	chr16	-	3372	6	NIC	ENSMUSG00000040820.17	novel	5371	11	NA	NA	3	111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.4434270134376	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTCCATTCTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	94114419	93930053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94114376
ES.14099.1	chr16	+	208	1	ISM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	8033	275	8033	-275	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGGAGATAAAATAGCT	NA	False	NA	NA	False	NA	NA	NA	94137311	94137519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94137300_94137500
ES.141.1	chr1	+	173	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCAAAGATTG	3075	False	NA	NA	False	NA	NA	NA	16056374	16056547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16056400_16056500
ES.1410.1	chr1	+	4481	9	NIC	ENSMUSG00000031506.12	novel	1990	10	NA	NA	-67	-7	intron_retention	FALSE	canonical	1	1	junction_1	2.26039266500314	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGATGCCCACCCAATT	NA	False	NA	NA	False	AATAAA	-14	NA	135060370	135073048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135060516_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ES.1410.3	chr1	+	3319	10	FSM	ENSMUSG00000031506.12	ENSMUST00000187985.7	1990	10	-41	-1288	-41	5	multi-exon	FALSE	canonical	1	1	junction_1	2.23330569358242	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATTCTTCTTTCCATC	NA	False	NA	NA	False	AATAAA	-26	NA	135060396	135073060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135060516_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ES.1410.4	chr1	+	3317	10	FSM	ENSMUSG00000031506.12	ENSMUST00000049449.11	3261	10	-64	8	-39	-8	multi-exon	FALSE	canonical	0	0	junction_1	2.40370085030933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGATGCCCACCCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	135060398	135073047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135060529_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ES.1410.5	chr1	+	3458	10	NNC	ENSMUSG00000031506.12	novel	3261	10	NA	NA	11	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.71256791460749	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCTTTCCATCATTT	NA	False	NA	NA	False	AATAAA	-30	NA	135060448	135073064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135060529_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069506_135069795_135070898
ES.1410.6	chr1	+	3398	10	FSM	ENSMUSG00000031506.12	ENSMUST00000167080.3	2945	10	-52	-401	-51	4	multi-exon	FALSE	canonical	0	0	junction_1	2.40370085030933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAATTCTTCTTTCCAT	NA	False	NA	NA	False	AATAAA	-25	NA	135060994	135073059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135061194_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ES.14100.1	chr16	+	6698	46	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-29	238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	31.7357141963995	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTATTTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	94171447	94269336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.11	chr16	+	6262	36	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	34.5993275857748	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257581_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.12	chr16	+	7296	46	FSM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	121	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_37	31.7357141963995	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.13	chr16	+	3688	33	ISM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	121	26528	0	13	5prime_fragment	FALSE	canonical	3	37	junction_3	18.7157760575804	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAAGCTAAAGTTGAAG	NA	False	NA	NA	False	AAAAAG	-38	NA	94171597	94243551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329
ES.14100.14	chr16	+	9359	41	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.5243754005175	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171597	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185642_94185794_94186194_94186235_94195381_94197764_94204172_94204228_94209412_94209576_94210542_94210589_94211496_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.15	chr16	+	6277	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	31.5407866815302	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.16	chr16	+	6387	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	32.8521735372631	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.18	chr16	+	5619	28	NNC	ENSMUSG00000040785.20	novel	6373	36	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.5152597412631	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCCGTTCACTGTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	94171600	94270076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94221102_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.19	chr16	+	3948	11	NIC	ENSMUSG00000040785.20	novel	3781	11	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	17.0144056610861	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTTGTAGAACTCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	94171602	94198057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.20	chr16	+	6795	41	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.0078017833153	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171606	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.21	chr16	+	5288	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-1	237	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	32.491690644494	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTATTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	94171606	94269335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.22	chr16	+	7350	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	33.4153905625279	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171607	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.23	chr16	+	7124	45	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	35.2086094256213	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171607	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94210542_94210589_94211691_94211816_94212914_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.24	chr16	+	6640	46	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	237	combination_of_known_junctions	FALSE	canonical	0	0	junction_37	32.7846998340671	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTATTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	94171617	94269335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.26	chr16	+	7219	45	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	33.9856177043143	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171617	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.27	chr16	+	5355	31	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.6139705996088	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171617	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211496_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94243669_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.28	chr16	+	6321	35	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	33.5901925874545	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171617	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.29	chr16	+	6357	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-4	231	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	32.9547021939846	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGTATTGGCTATTTT	NA	False	NA	NA	False	TATAAA	-10	NA	94171621	94269329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.30	chr16	+	10083	47	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	34.0974362772413	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171621	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193_94198009_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.34	chr16	+	7363	44	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.7223072926179	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171626	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94210542_94210589_94211496_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.35	chr16	+	6381	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	1	235	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	36.2385348070073	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTGGCTATTTTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	94171626	94269333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240046_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.36	chr16	+	6485	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.5007604138779	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171627	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.37	chr16	+	7222	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	32.3533563857212	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171627	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.38	chr16	+	6407	37	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	29.9596436379604	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171627	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.4	chr16	+	6153	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	33.9152061904023	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171596	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.40	chr16	+	6516	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	31.2991835179273	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCGTTCACTGTCGTC	NA	False	NA	NA	False	AATAAA	-15	NA	94171627	94270077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.41	chr16	+	6052	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	37.3170014035158	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCCGTTCACTGTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	94171627	94270076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240143_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.43	chr16	+	9667	46	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	36.8769458578455	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171627	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193_94197764_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240046_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.44	chr16	+	6605	37	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.2313602259844	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171627	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211496_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.46	chr16	+	6544	36	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.7891632247135	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171628	94270079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94204172_94204228_94210542_94210589_94211496_94211816_94212918_94212983_94216807_94216867_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.47	chr16	+	8108	45	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_3	33.1979724064713	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171628	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185670_94185794_94186194_94186283_94188195_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.48	chr16	+	5498	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	5	237	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	31.5407866815302	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTATTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	94171630	94269335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.49	chr16	+	4505	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-26	-698	5	698	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTGTGTGGTCTTTA	NA	False	NA	NA	False	GATAAA	-26	NA	94171630	94198752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.5	chr16	+	5979	32	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.8158866123091	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCAGCCGTTCACTG	NA	False	NA	NA	False	AATAAA	-10	NA	94171597	94270072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.50	chr16	+	7464	47	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3194776425867	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171630	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94173950_94174155_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.52	chr16	+	3207	10	FSM	ENSMUSG00000040785.20	ENSMUST00000145432.8	2973	10	26	-260	-4	260	multi-exon	FALSE	canonical	3	13	junction_2	18.1720175605853	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAATTTAAAACACATAC	NA	False	NA	NA	False	NA	NA	NA	94171634	94197501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94171721_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.53	chr16	+	9933	47	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	34.922713750907	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171634	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193_94197764_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.54	chr16	+	6163	35	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	35.1743679285009	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCAGCCGTTCACTG	NA	False	NA	NA	False	AATAAA	-10	NA	94171635	94270072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.55	chr16	+	7206	45	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.3174505598803	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171635	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185641_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230226_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.56	chr16	+	5367	33	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-3	238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	33.9152061904023	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTATTTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	94171635	94269336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.58	chr16	+	7357	46	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	36.8206597938484	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171636	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94234355_94234620_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.59	chr16	+	5616	10	NNC	ENSMUSG00000040785.20	novel	3781	11	NA	NA	-1	1756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0988215187606	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAAGTGTTAGATTGG	NA	False	NA	NA	False	NA	NA	NA	94171637	94199810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171824_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.6	chr16	+	5642	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	238	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	32.8521735372631	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTATTTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	94171597	94269336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.60	chr16	+	5652	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	236	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	29.9596436379604	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGCTATTTTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	94171638	94269334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.61	chr16	+	5864	32	NIC	ENSMUSG00000040785.20	novel	6373	36	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	36.8251486253609	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171638	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.62	chr16	+	3799	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-18	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCACTTTTGTAGAACT	NA	False	NA	NA	False	AGTAAA	-12	NA	94171638	94198054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.63	chr16	+	9820	47	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	34.0014733362529	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCCGTTCACTGTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	94171638	94270076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193_94197764_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.64	chr16	+	6570	45	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	1	236	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	35.3782030644027	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGCTATTTTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	94171640	94269334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94184770_94184926_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240046_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.66	chr16	+	2072	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-6	1715	0	-902	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGATGTTGAAATATT	NA	False	NA	NA	False	ATTAAA	-24	NA	94171650	94196339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.68	chr16	+	9429	47	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	34.3470074200731	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94171652	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193_94197388_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.7	chr16	+	6043	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	32.491690644494	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.72	chr16	+	3983	22	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	21.8580246735698	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	94171661	94249604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857
ES.14100.73	chr16	+	3128	11	NIC	ENSMUSG00000040785.20	novel	3781	11	NA	NA	5	55	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	17.0144056610861	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTATCTCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	94171661	94197296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.74	chr16	+	4428	11	NNC	ENSMUSG00000040785.20	novel	5833	41	NA	NA	570	689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0611564970716	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGACATCTCTTGTG	NA	False	NA	NA	False	GATAAA	-17	NA	94172251	94198743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94172274_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.75	chr16	+	4316	11	NIC	ENSMUSG00000040785.20	novel	8007	46	NA	NA	-2674	-1975	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.0611564970716	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCACCTTGGAGAATACC	NA	False	NA	NA	False	NA	NA	NA	94178925	94195266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94182313_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ES.14100.76	chr16	+	6401	41	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	4423	462	3459	-339	3prime_fragment	FALSE	canonical	0	0	junction_32	29.6882131493291	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACAAAGAAACAAACAA	NA	False	NA	NA	False	AATACA	-35	NA	94188189	94269740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.77	chr16	+	8726	36	NNC	ENSMUSG00000040785.20	novel	1408	10	NA	NA	10461	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	33.2709838650278	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94195191	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94197764_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.78	chr16	+	7804	37	NNC	ENSMUSG00000040785.20	novel	1408	10	NA	NA	11044	236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	31.8741255024073	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGCTATTTTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	94195774	94269334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94198009_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.79	chr16	+	5881	37	NNC	ENSMUSG00000040785.20	novel	1408	10	NA	NA	12541	237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2554785278676	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTATTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	94197271	94269335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94197585_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.8	chr16	+	7403	46	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	32.7846998340671	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94171597	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171831_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.80	chr16	+	178	1	Intergenic	novelGene_11800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGACAAGCAT	NA	False	NA	NA	False	NA	NA	NA	94203665	94203843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94203700_94203800
ES.14100.81	chr16	+	6114	32	NNC	ENSMUSG00000040785.20	novel	5833	41	NA	NA	-16338	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	31.2631741221436	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCAGCCGTTCACTG	NA	False	NA	NA	False	AATAAA	-10	NA	94203966	94270072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.82	chr16	+	6290	34	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	26582	124	-9956	-1	3prime_fragment	FALSE	canonical	0	0	junction_25	27.9988521344146	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94210348	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.83	chr16	+	4210	22	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	27788	20582	-8750	16	internal_fragment	FALSE	canonical	3	73	junction_3	12.0209567572862	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCTTTAGTGGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	94211554	94249620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857
ES.14100.85	chr16	+	5770	31	ISM	ENSMUSG00000040785.20	ENSMUST00000231569.2	6373	36	41291	122	-7363	1	3prime_fragment	FALSE	canonical	0	0	junction_3	33.3055884533245	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94212941	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94212983_94216807_94216869_94217140_94217226_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.86	chr16	+	9055	31	NNC	ENSMUSG00000040785.20	novel	1408	10	NA	NA	-7000	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.2126435869512	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGTTCACTGTCGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	94213304	94270078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94215082_94215290_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.87	chr16	+	5285	25	NIC	ENSMUSG00000040785.20	novel	6373	36	NA	NA	2779	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	35.2786280518705	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGCCGTTCACTGTCG	NA	False	NA	NA	False	AATAAA	-13	NA	94223083	94270075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.89	chr16	+	4202	20	NNC	ENSMUSG00000040785.20	novel	6373	36	NA	NA	6775	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.2447498339433	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCAGCCGTTCACTG	NA	False	NA	NA	False	AATAAA	-10	NA	94232781	94270072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253889_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784_94269264_94269336
ES.14100.9	chr16	+	6527	38	NNC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.8111682072632	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94171597	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94171721_94204172_94204228_94208878_94208975_94209605_94209761_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.90	chr16	+	2169	10	ISM	ENSMUSG00000040785.20	ENSMUST00000231915.2	5833	41	58644	8101	-750	61	internal_fragment	FALSE	canonical	0	0	junction_5	36.5270067514739	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCAGTTTGTTGCTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	94243374	94260997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620
ES.14100.91	chr16	+	4660	13	NIC	ENSMUSG00000040785.20	novel	6373	36	NA	NA	-232	1	intron_retention	FALSE	canonical	3	99	junction_4	16.745438848302	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94243892	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.93	chr16	+	3911	11	ISM	ENSMUSG00000040785.20	ENSMUST00000231915.2	5833	41	65083	-236	-2171	236	3prime_fragment	FALSE	canonical	0	0	junction_2	41.3967390020035	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGCTATTTTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	94249813	94269334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.94	chr16	+	4049	11	ISM	ENSMUSG00000040785.20	ENSMUST00000231915.2	5833	41	65692	-983	-1562	2	3prime_fragment	FALSE	canonical	0	0	junction_2	41.3967390020035	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCACTGTCGTCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	94250422	94270081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.95	chr16	+	7878	5	NIC	ENSMUSG00000040785.20	novel	926	7	NA	NA	2005	237	intron_retention	FALSE	canonical	3	128	junction_4	13.0958008537088	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGGCTATTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	94253989	94269335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ES.14100.96	chr16	+	1526	3	ISM	ENSMUSG00000040785.20	ENSMUST00000154196.2	926	7	5097	-1227	-4028	1	3prime_fragment	FALSE	canonical	3	128	junction_2	2.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCACTGTCGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94263352	94270080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94263490_94267761_94267855_94268784
ES.14101.1	chr16	-	694	5	NNC	ENSMUSG00000022940.18	novel	912	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	187.268523783363	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGAGTAGATCTATAT	NA	False	NA	NA	False	AATAAA	-26	NA	94171870	94165307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171811
ES.14101.11	chr16	-	3416	3	ISM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	192	4	-4	intron_retention	FALSE	canonical	3	435	junction_1	11.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTCATTTACAGTT	NA	False	NA	-12	True	TATAAA	-7	NA	94171567	94165497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_94165647_94166213_94166333_94168419
ES.14101.2	chr16	-	3603	3	ISM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	4	5	4	0	intron_retention	FALSE	canonical	3	435	junction_1	11.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171567	94165310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_94165647_94166213_94166333_94168419
ES.14101.3	chr16	-	738	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	14	6	14	-1	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACCTTGAGTAGATCT	NA	False	NA	NA	False	AATAAA	-22	NA	94171860	94165311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
ES.14101.4	chr16	-	730	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	9	6	-9	-1	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACCTTGAGTAGATCT	NA	False	NA	NA	False	AATAAA	-22	NA	94171562	94165311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ES.14101.6	chr16	-	918	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	38	10	38	-5	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTCAACCTTGAGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	94171515	94165315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
ES.14101.7	chr16	-	5637	2	FSM	ENSMUSG00000022940.18	ENSMUST00000146924.2	499	2	-5145	7	32	-7	multi-exon	FALSE	canonical	3	435	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATAGTCAACCTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	94171521	94165317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213
ES.14101.8	chr16	-	746	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	38	182	38	6	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACAGTTGTGGGCTGAA	NA	False	NA	-2	True	TATAAA	-17	NA	94171515	94165487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
ES.14101.9	chr16	-	578	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	-15	182	-15	6	multi-exon	FALSE	canonical	3	162	junction_4	117.933243828871	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACAGTTGTGGGCTGAA	NA	False	NA	-2	True	TATAAA	-17	NA	94171586	94165487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ES.14102.1	chr16	-	1842	1	Antisense	novelGene_ENSMUSG00000040785.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCGAACACACCATTAT	NA	False	NA	NA	False	NA	NA	NA	94269255	94267413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_94267400_94269300
ES.14103.1	chr16	-	174	1	Intergenic	novelGene_11801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACAATCCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	94292760	94292586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94292600_94292800
ES.14104.1	chr16	-	2441	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	158	-52	158	52	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAATGTGTTCCTCAGT	NA	False	NA	-5	True	AGTAAA	-13	NA	94327531	94298589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14104.10	chr16	-	939	8	NNC	ENSMUSG00000022898.14	novel	734	8	NA	NA	-10	1765	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	125.216221156911	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAACTGTTTACTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	94327263	94300692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94300811_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14104.3	chr16	-	4487	6	NNC	ENSMUSG00000022898.14	novel	2547	8	NA	NA	-5	-9	intron_retention	FALSE	non_canonical	0	0	junction_3	146.557838412007	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTAATGGTTTGGACT	NA	False	NA	-22	True	AATAAA	-14	NA	94327305	94298650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94299942_94302393_94302547_94302940_94303096_94305160_94306304_94311596_94313233_94327196
ES.14104.5	chr16	-	4954	6	NIC	ENSMUSG00000022898.14	novel	2547	8	NA	NA	-2	-28	intron_retention	FALSE	canonical	3	328	junction_2	20.0459472213213	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAAGCTAAACAAG	NA	False	NA	-41	True	NA	NA	NA	94327278	94298669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14104.6	chr16	-	1500	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	392	655	3	-655	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGGCTGTTGCTGGAG	NA	False	NA	-1	True	AATAAA	-42	NA	94327297	94299296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14104.7	chr16	-	1483	8	NNC	ENSMUSG00000022898.14	novel	2547	8	NA	NA	-5	-674	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	126.802111615714	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGAGGGAGAATGGTGA	NA	False	NA	-20	True	AATAAA	-23	NA	94327305	94299315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305230_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14104.9	chr16	-	1213	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	357	977	-32	-977	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGATGTGCCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	94327332	94299618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ES.14105.1	chr16	+	349	1	Intergenic	novelGene_11802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAATTCCTTGATT	NA	False	NA	NA	False	AAGAAA	-5	NA	94327839	94328188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94327800_94328200
ES.14106.1	chr16	+	152	1	Intergenic	novelGene_11803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATAATAATAAATAAGTC	NA	False	NA	NA	False	NA	NA	NA	94350275	94350427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94350300_94350400
ES.14107.1	chr16	-	207	1	Intergenic	novelGene_11804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTTCCTCTGTGCTTGT	3232	False	NA	NA	False	CATAAA	-7	NA	94356129	94355922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94355900_94356100
ES.14108.1	chr16	+	3784	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-706	371	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	51.636523687332	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	NA	False	NA	17	True	AATAAA	-27	NA	94370162	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94486079_94486201_94487337_94487463_94492439
ES.14108.10	chr16	+	2759	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-348	371	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	53.7330407609833	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	NA	False	NA	17	True	AATAAA	-27	NA	94370520	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.11	chr16	+	3528	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-347	374	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATAAGGGTGTTTTGTT	NA	False	NA	20	True	AATAAA	-30	NA	94370521	94493434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.12	chr16	+	3227	13	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-344	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.7685368552609	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAAGGGTGTTTTGTTT	NA	False	NA	21	True	AATAAA	-31	NA	94370524	94493435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370597_94370954_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.13	chr16	+	5854	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-344	-209	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	46.8888257847333	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGTCTTTACTATGCT	NA	False	NA	13	True	GATAAA	-18	NA	94370524	94495717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474235_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.14	chr16	+	5025	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-330	-211	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	53.7330407609833	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	NA	False	NA	11	True	GATAAA	-16	NA	94370538	94495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.15	chr16	+	5974	11	FSM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	-799	-2864	-330	-2	multi-exon	FALSE	canonical	2	15	junction_1	53.9285638599805	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTTTAAAATGGA	NA	False	NA	18	True	AGTAAA	-20	NA	94370538	94495924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.16	chr16	+	6540	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-329	-452	-329	2	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	94370539	94496378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.17	chr16	+	5233	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-329	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	53.7330407609833	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTTTAAAATGGA	NA	False	NA	18	True	AGTAAA	-20	NA	94370539	94495924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.18	chr16	+	5048	11	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-329	-128	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	51.6372927253163	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGGGTCCGGGTGTGGTA	NA	False	NA	94	True	AGTAAA	-23	NA	94370539	94495798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.19	chr16	+	3089	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-329	371	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	47.9932846542183	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	NA	False	NA	17	True	AATAAA	-27	NA	94370539	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370890_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.2	chr16	+	6492	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-706	-27	-706	27	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGATTATCATGTTGAT	NA	False	NA	47	True	TTTAAA	-15	NA	94370162	94495953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.20	chr16	+	5259	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-329	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	49.4577204863152	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGGTTTTTAAAATGG	NA	False	NA	17	True	AGTAAA	-19	NA	94370539	94495923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.21	chr16	+	5047	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-325	-211	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	49.4577204863152	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	NA	False	NA	11	True	GATAAA	-16	NA	94370543	94495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.22	chr16	+	2758	12	NNC	ENSMUSG00000022897.16	novel	2561	4	NA	NA	-325	366	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	49.4577204863152	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGGCCCCATAAGGGT	NA	False	NA	12	True	AATAAA	-22	NA	94370543	94493426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94370568_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.23	chr16	+	5918	13	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	102156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	53.768536855261	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGACTGTAGAAAGTGAGG	NA	False	NA	NA	False	NA	NA	NA	94370543	94598532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439_94495715_94598459
ES.14108.24	chr16	+	6281	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	363	intron_retention	FALSE	canonical	3	100	junction_3	31.1911846520776	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAAGGGCCCCATAAG	NA	False	NA	9	True	AATAAA	-19	NA	94370543	94493423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.25	chr16	+	6419	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.0930454875301	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	94370543	94496378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486111_94487337_94487463_94492439
ES.14108.26	chr16	+	3392	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	371	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	53.0442268300708	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	NA	False	NA	17	True	AATAAA	-27	NA	94370543	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.27	chr16	+	4073	9	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-313	18	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	41.7789944230351	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCACTGTCATTGACTG	NA	False	NA	NA	False	NA	NA	NA	94370555	94480398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310
ES.14108.28	chr16	+	5739	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-312	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.0930454875301	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCCTCAGAGTCTTTAC	NA	False	NA	7	True	GATAAA	-12	NA	94370556	94495711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486111_94487337_94487463_94492439
ES.14108.3	chr16	+	6436	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-704	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTTTTAAAATGGATT	NA	False	NA	20	True	AGTAAA	-22	NA	94370164	94495926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.30	chr16	+	5766	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-302	-209	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGTCTTTACTATGCT	NA	False	NA	13	True	GATAAA	-18	NA	94370566	94495717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.31	chr16	+	5947	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-276	-2	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGTTTTTAAAATGGA	NA	False	NA	18	True	AGTAAA	-20	NA	94370592	94495924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.32	chr16	+	5597	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-262	-211	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	55.3607254048876	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	NA	False	NA	11	True	GATAAA	-16	NA	94370606	94495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94486079_94486201_94487337_94487463_94492439
ES.14108.34	chr16	+	5588	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-228	-213	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	51.636523687332	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCAGAGTCTTTACTA	NA	False	NA	9	True	GATAAA	-14	NA	94370640	94495713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94486079_94486201_94487337_94487463_94492439
ES.14108.35	chr16	+	3079	11	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-3	371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.7299753107389	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	69	False	NA	17	True	AATAAA	-27	NA	94370865	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472356_94474204_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.36	chr16	+	5071	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	13	675	13	-675	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGGTAGTTGATGAG	85	False	NA	NA	False	ATTAAA	-22	NA	94370881	94495251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.37	chr16	+	5566	12	NNC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	24	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.2857341155403	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGTCTTTACTATGCT	96	False	NA	13	True	GATAAA	-18	NA	94370892	94495717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94371413_94412229_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.39	chr16	+	2868	12	FSM	ENSMUSG00000022897.16	ENSMUST00000023614.5	5754	12	-59	2945	-16	371	multi-exon	FALSE	canonical	0	0	junction_1	51.1867428601205	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCATAAGGGTGTTTT	910	False	NA	17	True	AATAAA	-27	NA	94371706	94493431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371836_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.4	chr16	+	3932	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-687	379	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGTGTTTTGTTTTGTT	NA	False	NA	25	True	AATAAA	-35	NA	94370181	94493439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.40	chr16	+	5024	11	ISM	ENSMUSG00000022897.16	ENSMUST00000023614.5	5754	12	40511	661	40511	-211	3prime_fragment	FALSE	canonical	3	100	junction_2	26.9979628861142	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	1434	False	NA	11	True	GATAAA	-16	NA	94412276	94495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.41	chr16	+	4245	1	Intergenic	novelGene_11806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATTCAGAATTCC	NA	False	NA	NA	False	NA	NA	NA	94440596	94444841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94440600_94444800
ES.14108.42	chr16	+	170	1	Intergenic	novelGene_11807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAGAAGTTACA	3978	False	NA	NA	False	NA	NA	NA	94463937	94464107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94463900_94464100
ES.14108.43	chr16	+	4175	3	ISM	ENSMUSG00000022897.16	ENSMUST00000134383.2	2561	4	738	-2	738	2	3prime_fragment	FALSE	canonical	3	155	junction_2	27	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAG	1993	False	NA	NA	False	AATAAA	-39	NA	94470492	94480382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94472449_94474195_94474343_94478310
ES.14108.44	chr16	+	4000	5	ISM	ENSMUSG00000022897.16	ENSMUST00000023614.5	5754	12	102429	658	4440	-208	3prime_fragment	FALSE	canonical	3	142	junction_3	12.1449578014911	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTTACTATGCTT	5695	False	NA	14	True	GATAAA	-19	NA	94474194	94495718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.45	chr16	+	4839	2	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22163	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATTATTTGTTTTTGGC	NA	False	NA	NA	False	AATAAA	-25	NA	94544915	94554303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94545201_94549749
ES.14108.46	chr16	+	3775	5	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22176	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.68114574786861	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCATTATTTGTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	94544928	94554301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94545201_94549749_94552817_94553485_94553564_94553805_94553999_94554136
ES.14108.47	chr16	+	3729	5	NNC	ENSMUSG00000116641.2	novel	1200	5	NA	NA	22189	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.76208734813001	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAACCATTATTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	94544941	94554298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_94545201_94549749_94552693_94553485_94553564_94553711_94553999_94554136
ES.14108.48	chr16	+	6633	1	Intergenic	novelGene_11810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGAGGAACCACTCTG	NA	False	NA	NA	False	AAAAAG	-12	NA	94567590	94574223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94567600_94574200
ES.14108.49	chr16	+	1576	3	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAAGATCTGGGGTCCT	NA	False	NA	NA	False	NA	NA	NA	94597233	94612173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_94597296_94597614_94597751_94610795
ES.14108.5	chr16	+	6292	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-687	154	-687	-154	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAACAATCTTCGTGT	NA	False	NA	68	True	TTTAAA	-28	NA	94370181	94495772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.6	chr16	+	6274	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-685	-143	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCGTGTGCAGTGAAGCG	NA	False	NA	79	True	AGTAAA	-8	NA	94370183	94495783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.7	chr16	+	3952	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-681	2488	-681	378	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGGTGTTTTGTTTTGT	NA	False	NA	24	True	AATAAA	-34	NA	94370187	94493438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.8	chr16	+	5784	11	FSM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	-818	-2655	-349	-211	multi-exon	FALSE	canonical	2	15	junction_1	53.9285638599805	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGAGTCTTTACTATG	NA	False	NA	11	True	GATAAA	-16	NA	94370519	94495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14108.9	chr16	+	3492	11	FSM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	-817	-364	-348	364	multi-exon	FALSE	canonical	2	15	junction_1	53.9285638599805	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAAGGGCCCCATAAGG	NA	False	NA	10	True	AATAAA	-20	NA	94370520	94493424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_94371394_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ES.14109.1	chr16	-	242	1	Intergenic	novelGene_11805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGGAAACGAAAGC	NA	False	NA	NA	False	NA	NA	NA	94427136	94426894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94426900_94427100
ES.1411.1	chr1	+	2646	8	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.387328898417	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135073346	135084007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135074396_135074677_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.10	chr1	+	1564	5	NIC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	212.180789658253	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGTATGGTGCTG	NA	False	NA	13	True	AATAAA	-17	NA	135074553	135084005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135074839_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.11	chr1	+	1486	7	FSM	ENSMUSG00000026426.11	ENSMUST00000125774.2	1495	7	-4	13	-4	-13	multi-exon	FALSE	canonical	1	1	junction_1	183.490235889179	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTGTTGGGGGGTGT	NA	False	NA	2	True	AATAAA	-6	NA	135075402	135083994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135075466_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.12	chr1	+	4091	1	NIC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	2078	-458	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	135077484	135081575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135077500_135081600
ES.1411.13	chr1	+	4220	4	NIC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-949	-1	intron_retention	FALSE	canonical	3	483	junction_2	21.2759645296439	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGTATGGTGCTGG	NA	False	NA	14	True	AATAAA	-18	NA	135078870	135084006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135080290_135080530_135082214_135082450_135082522_135082959
ES.1411.14	chr1	+	1536	2	NIC	ENSMUSG00000026426.11	novel	472	3	NA	NA	112	-2	intron_retention	FALSE	canonical	3	526	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGTATGGTGCTG	NA	False	NA	13	True	AATAAA	-17	NA	135082031	135084005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135082522_135082959
ES.1411.2	chr1	+	1848	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	-129	-6	-129	6	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGTGCTGGTTGTTTC	NA	False	NA	21	True	AATAAA	-25	NA	135074432	135084013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.3	chr1	+	1950	8	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-87	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.783576733194	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGTATGGTGCTGG	NA	False	NA	14	True	AATAAA	-18	NA	135074474	135084006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135074839_135075829_135075981_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.4	chr1	+	1915	6	NIC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-66	-2	intron_retention	FALSE	canonical	3	419	junction_3	43.7474570689543	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGTATGGTGCTG	NA	False	NA	13	True	AATAAA	-17	NA	135074495	135084005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082214_135082450_135082522_135082959
ES.1411.6	chr1	+	6908	7	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.854486543631	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGTATGGTGCTG	NA	False	NA	13	True	AATAAA	-17	NA	135074546	135084005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135077167_135077354_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.1411.7	chr1	+	7284	5	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	209.600811067133	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGTATGGTGCTGG	NA	False	NA	14	True	AATAAA	-18	NA	135074550	135084006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135077167_135077354_135080605_135081913_135082214_135082450_135082522_135082959
ES.1411.8	chr1	+	1413	8	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.387328898417	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGTATGGTGCTG	NA	False	NA	13	True	AATAAA	-17	NA	135074550	135084005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959_135083430_135083738
ES.1411.9	chr1	+	1692	7	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.854486543631	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074553	135084007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135074810_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ES.14110.1	chr16	-	2989	1	Intergenic	novelGene_11808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTGCTGGTTCTTACAG	NA	False	NA	NA	False	NA	NA	NA	94503281	94500292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94500300_94503300
ES.14111.1	chr16	-	1512	2	Antisense	novelGene_ENSMUSG00000116641.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTATGTTTCTGTT	954	False	NA	NA	False	NA	NA	NA	94525880	94524186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_94525420_94525601
ES.14112.1	chr16	-	174	1	Intergenic	novelGene_11809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGCAGGGACTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	94531645	94531471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94531500_94531600
ES.14113.1	chr16	-	1570	1	Intergenic	novelGene_11811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGGGAAGTCCAGAGA	NA	False	NA	NA	False	NA	NA	NA	94582584	94581014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94581000_94582600
ES.14114.1	chr16	-	177	1	Intergenic	novelGene_11812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGACCCACCAGAACCCA	NA	False	NA	NA	False	NA	NA	NA	94597961	94597784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_94597800_94598000
ES.14115.1	chr16	-	6169	1	Genic_Genomic	ENSMUSG00000043301.17	novel	NA	NA	NA	NA	29440	1468	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCTCAGGGCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	94628091	94621922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_94621900_94628100
ES.14116.1	chr16	+	451	2	Antisense	novelGene_ENSMUSG00000043301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTACTTCTGTCTGTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	94656115	94656880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_94656240_94656553
ES.14117.1	chr16	+	5860	3	Intergenic	novelGene_11813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTGGTTTCCTGGCCT	NA	False	NA	7	True	AATAAA	-17	NA	94662327	94670833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_94667539_94669776_94670200_94670607
ES.14118.1	chr16	+	182	1	Intergenic	novelGene_11814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGGAAGAAAATTAGT	NA	False	NA	NA	False	NA	NA	NA	95220888	95221070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95220900_95221100
ES.14119.1	chr16	+	179	1	Intergenic	novelGene_11815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	95319120	95319299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95319100_95319300
ES.1412.1	chr1	-	2593	1	FSM	ENSMUSG00002075149.1	ENSMUST00020182881.1	101	1	-1269	-1223	-1269	1223	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGATCTCCCACTT	NA	False	NA	NA	False	NA	NA	NA	135079773	135077180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135077200_135079800
ES.14120.1	chr16	-	3325	12	NNC	ENSMUSG00000040732.21	novel	3249	11	NA	NA	-15108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1.61091319515176	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTAGTCTCCGTTTGT	3471	False	NA	NA	False	AATAAA	-31	NA	95346332	95160027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122_95331225_95346256
ES.14120.2	chr16	-	3260	11	NNC	ENSMUSG00000040732.21	novel	3249	11	NA	NA	-15117	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.4456832294801	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGGTAGTCTCCGTTT	3462	False	NA	NA	False	AATAAA	-29	NA	95346341	95160029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122_95331225_95346256
ES.14121.1	chr16	+	126	1	Intergenic	novelGene_11816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	95367442	95367568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95367400_95367600
ES.14122.1	chr16	+	4025	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	-133	-2	-133	2	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAATGTTGGATTCT	NA	False	NA	23	True	AATAAA	-23	NA	95502808	95522097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ES.14122.10	chr16	+	3250	8	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	7872	0	3608	0	3prime_fragment	FALSE	canonical	3	119	junction_5	13.3737482725354	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGTAATGTTGGATT	NA	False	NA	21	True	AATAAA	-21	NA	95510813	95522095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ES.14122.3	chr16	+	3065	9	NNC	ENSMUSG00000022895.17	novel	3890	10	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	48.0284746270377	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGTAATGTTGGATT	NA	False	NA	21	True	AATAAA	-21	NA	95503266	95522095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517214_95520219
ES.14122.5	chr16	+	4395	9	NIC	ENSMUSG00000022895.17	novel	3890	10	NA	NA	-39	-2	intron_retention	FALSE	canonical	3	115	junction_1	13.4884209602162	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTTTGTAATGTTGGA	NA	False	NA	19	True	AATAAA	-19	NA	95503282	95522093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95517342_95518891_95519011_95519966
ES.14122.9	chr16	+	2644	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	394	852	14	-846	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTTTTACTGCAAAAG	NA	False	NA	NA	False	AATATA	-16	NA	95503335	95521243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ES.14123.1	chr16	-	1482	1	Antisense	novelGene_ENSMUSG00000022895.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCTGTAAAAGAATTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	95503195	95501713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_95501700_95503200
ES.14124.1	chr16	-	1562	1	Antisense	novelGene_ENSMUSG00000022895.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	95511695	95510133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_95510100_95511700
ES.14125.1	chr16	+	1567	1	Intergenic	novelGene_11817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACAGGAGAAGCCCTT	NA	False	NA	NA	False	AGTAAA	-36	NA	95568780	95570347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95568800_95570300
ES.14126.1	chr16	-	191	1	Intergenic	novelGene_11818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTAATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	95613584	95613393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_95613400_95613600
ES.14127.1	chr16	-	172	1	Intergenic	novelGene_11819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	95643970	95643798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_95643800_95644000
ES.14128.1	chr16	+	5021	1	Intergenic	novelGene_11820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTCCACCTCAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	95747653	95752674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95747700_95752700
ES.14129.1	chr16	+	3424	2	Intergenic	novelGene_11821	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTTTCATCTGAGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	95752921	95772096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95753016_95768766
ES.1413.1	chr1	+	3042	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCGATGGGATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	135095700	135098742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135095700_135098700
ES.14130.1	chr16	-	1048	1	Intergenic	novelGene_11822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGTAGCTTTGTTATT	6377	False	NA	NA	False	AAGAAA	-32	NA	95762744	95761696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_95761700_95762700
ES.14131.1	chr16	+	1086	1	Antisense	novelGene_ENSMUSG00000022914.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGATAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95801826	95802912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_95801800_95802900
ES.14132.1	chr16	+	179	1	Intergenic	novelGene_11823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	3214	False	NA	NA	False	NA	NA	NA	95828101	95828280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95828100_95828300
ES.14133.1	chr16	+	171	1	Intergenic	novelGene_11824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAGAGACAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	95843539	95843710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95843500_95843700
ES.14134.1	chr16	+	2954	1	Intergenic	novelGene_11825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGGTGGCGCACCC	NA	False	NA	NA	False	GATAAA	-36	NA	95862717	95865671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95862700_95865700
ES.14135.1	chr16	-	1046	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	2	-4	2	4	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATTTTCTTAATGAT	NA	False	NA	-6	True	AATAAA	-20	NA	95792158	95781128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ES.14135.12	chr16	-	1658	4	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	50	6181	-20	1872	5prime_fragment	FALSE	canonical	3	1222	junction_1	42.6249796350554	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATATTATATAT	NA	False	NA	NA	False	NA	NA	NA	95792110	95787313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95788556_95789159_95789312_95790691_95790799_95791953
ES.14135.13	chr16	-	1490	5	NNC	ENSMUSG00000022913.17	novel	533	2	NA	NA	-13	1872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	555.772210532337	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATATTATATAT	NA	False	NA	NA	False	NA	NA	NA	95792103	95787313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95788332_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ES.14135.14	chr16	-	7883	1	Genic_Genomic	ENSMUSG00000022914.18	novel	NA	NA	NA	NA	9042	3	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCTCTTTATTGT	7549	False	NA	0	True	TTTAAA	-1	NA	95801171	95793288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_95793300_95801200
ES.14135.15	chr16	-	10105	44	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0319227128666	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTGGTCTCTTTAT	NA	False	NA	-3	True	NA	NA	NA	95883630	95793291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95795178_95803466_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883081_95883304_95883381_95883453
ES.14135.16	chr16	-	6994	22	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	1936	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.5341344683526	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTGGTCTCTTTAT	NA	False	NA	-3	True	NA	NA	NA	95834894	95793291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95795178_95795408_95795480_95803633_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784
ES.14135.17	chr16	-	4471	1	NIC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	12323	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTGTGAATTTTGGCA	NA	False	NA	NA	False	AATATA	-12	NA	95797890	95793419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95793400_95797900
ES.14135.18	chr16	-	2841	3	ISM	ENSMUSG00000022914.18	ENSMUST00000023631.17	8209	42	78422	-225	4988	-132	3prime_fragment	FALSE	canonical	3	5	junction_1	61.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGACCTGTGAATTTT	3495	False	NA	NA	False	AATATA	-8	NA	95805225	95793423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95795178_95803633_95804555_95805059
ES.14135.19	chr16	-	6398	1	NIC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	10168	1	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGTGTGTGTCTTTTT	8675	False	NA	-3	True	AAAACA	-21	NA	95800045	95793647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95793600_95800000
ES.14135.2	chr16	-	6276	5	NIC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	-8	3	intron_retention	FALSE	canonical	3	1204	junction_1	49.6462485994662	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTATTTTCTTAATGA	NA	False	NA	-7	True	AATAAA	-19	NA	95792098	95781129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95783439_95784992_95788556_95789159_95789312_95790691_95790799_95791953
ES.14135.20	chr16	-	9939	46	NNC	ENSMUSG00000022914.18	novel	8209	42	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	103.971966782125	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATAGTGTGTGTCTTTT	NA	False	NA	-4	True	AAAACA	-20	NA	95883755	95793648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95795178_95795408_95795480_95803477_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.21	chr16	-	3197	15	NIC	ENSMUSG00000022914.18	novel	8209	42	NA	NA	2559	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.7714642065005	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATAGTGTGTGTCTTTT	NA	False	NA	-4	True	AAAACA	-20	NA	95845801	95793648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95795178_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663
ES.14135.22	chr16	-	6054	1	NIC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	10376	-135	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGGTGTGTATTTTTC	8883	False	NA	NA	False	TATAAA	-18	NA	95799837	95793783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95793800_95799800
ES.14135.23	chr16	-	2822	3	NNC	ENSMUSG00000022914.18	novel	8209	42	NA	NA	4788	-150	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	63	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAATGGAACCTAG	3295	False	NA	NA	False	ATTAAA	-41	NA	95805425	95793798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95795178_95803477_95804555_95805059
ES.14135.24	chr16	-	8306	46	NNC	ENSMUSG00000022914.18	novel	8209	42	NA	NA	-3	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.000132953381	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGTCTCAGGACCAGA	NA	False	NA	NA	False	AATAAA	-25	NA	95883631	95795001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95795178_95795408_95795480_95803633_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.25	chr16	-	3958	1	Genic_Genomic	ENSMUSG00000022914.18	novel	NA	NA	NA	NA	7009	1224	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAACCTTAACTTCCTA	5516	False	NA	NA	False	ATTAAA	-18	NA	95803204	95799246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_95799200_95803200
ES.14135.26	chr16	-	3894	1	Genic_Genomic	ENSMUSG00000022914.18	novel	NA	NA	NA	NA	6764	915	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTTGTTCCCTGCA	5271	False	NA	NA	False	TTTAAA	-20	NA	95803449	95799555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_95799600_95803400
ES.14135.27	chr16	-	11941	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	21	645	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTACCTGGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	95883705	95799825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.28	chr16	-	5995	4	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	805	582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.1677820196328	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	NA	False	NA	NA	False	ATTAAA	-40	NA	95809408	95799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806222_95806331_95809036
ES.14135.29	chr16	-	2904	2	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	6384	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	4891	False	NA	NA	False	ATTAAA	-40	NA	95803829	95799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95799940_95800976
ES.14135.3	chr16	-	6790	33	Fusion	ENSMUSG00000022913.17_ENSMUSG00000022914.18	novel	9843	41	NA	NA	2575	0	multi-exon	TRUE	canonical	0	0	junction_6	408.333345556973	519	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95845785	95781132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95795408_95795568_95803633_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663
ES.14135.30	chr16	-	6160	3	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	954	582	intron_retention	FALSE	canonical	3	128	junction_1	42	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	NA	False	NA	NA	False	ATTAAA	-40	NA	95809259	95799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95806331_95809036
ES.14135.31	chr16	-	11784	43	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	15	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	82.7691103225277	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACAGTCTCTTGTATA	NA	False	NA	NA	False	ATTAAA	-40	NA	95883613	95799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848363_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883080_95883301_95883381_95883453
ES.14135.32	chr16	-	11883	44	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	5	550	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_35	104.198633998742	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGCAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-8	NA	95883721	95799920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860874_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.33	chr16	-	11263	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-13	12	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGTGTCCTGATTCTG	NA	False	NA	-2	True	ATTAAA	-29	NA	95883660	95800458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.34	chr16	-	5100	3	ISM	ENSMUSG00000022914.18	ENSMUST00000099502.9	8547	42	72444	7177	-732	2	internal_fragment	FALSE	canonical	3	118	junction_1	39.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCCCCTCCAGTGT	NA	False	NA	-12	True	ATTAAA	-19	NA	95811184	95800468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95804555_95809919_95810769_95811019
ES.14135.35	chr16	-	7693	16	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	34	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	59.9149026165908	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCCCCTCCAGTGT	NA	False	NA	-12	True	ATTAAA	-19	NA	95828572	95800468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825032_95828544
ES.14135.36	chr16	-	11186	44	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	103.36162083665	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCCCCTCCAGTGT	NA	False	NA	-12	True	ATTAAA	-19	NA	95883638	95800468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806286_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.37	chr16	-	5979	4	NIC	ENSMUSG00000022914.18	novel	1193	4	NA	NA	48	0	intron_retention	FALSE	canonical	3	128	junction_1	39.8357739838062	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTCCCCCTCCAGT	NA	False	NA	-14	True	ATTAAA	-17	NA	95810165	95800470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95806331_95809036_95809415_95809919
ES.14135.38	chr16	-	10874	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-42	-485	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGGTCATTGCTTTTT	NA	False	NA	5	True	AATAAA	-32	NA	95883768	95800955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.39	chr16	-	4355	2	ISM	ENSMUSG00000022914.18	ENSMUST00000099502.9	8547	42	72946	7671	-230	-492	internal_fragment	FALSE	canonical	3	118	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCCTAGGGTGGTCATT	NA	False	NA	-2	True	AATAAA	-25	NA	95810682	95800962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95804555_95809919
ES.14135.4	chr16	-	8221	6	ISM	ENSMUSG00000022913.17_ENSMUSG00000022914.18	ENSMUST00000023630.16	1044	7	-6022	0	-6022	0	intron_retention	FALSE	canonical	3	1101	junction_3	74.082116600432	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95798182	95781132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691
ES.14135.41	chr16	-	6575	11	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-4	-498	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	148.024862776494	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTAGTTCCTAGGGTG	NA	False	NA	-8	True	AATAAA	-19	NA	95883730	95800968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.42	chr16	-	10681	43	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-4	-500	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	105.193259679916	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGTAGTTCCTAGGG	NA	False	NA	-10	True	AATAAA	-17	NA	95883632	95800970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.43	chr16	-	7652	20	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	1936	-503	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	49.3503501883412	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTCAGGTAGTTCCTA	NA	False	NA	-13	True	AATAAA	-14	NA	95834894	95800973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806286_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784
ES.14135.45	chr16	-	8950	44	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-3	-2230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	93.5500317316513	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTAGTCATAGTATTTTC	NA	False	NA	NA	False	TTTAAA	-13	NA	95883631	95802700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869786_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.46	chr16	-	8806	43	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	1	-2270	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	105.452087969574	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTTTGGAGTGCAT	NA	False	NA	NA	False	TATAAA	-30	NA	95883646	95802740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.47	chr16	-	8966	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	1	-2271	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATGTTTGGAGTGCA	NA	False	NA	NA	False	TATAAA	-29	NA	95883646	95802741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.48	chr16	-	6314	7	NIC	ENSMUSG00000022914.18	novel	1193	4	NA	NA	-1921	-2271	intron_retention	FALSE	canonical	3	128	junction_1	29.590257405662	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATGTTTGGAGTGCA	NA	False	NA	NA	False	TATAAA	-29	NA	95814998	95802741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909
ES.14135.49	chr16	-	4018	4	NIC	ENSMUSG00000022914.18	novel	1193	4	NA	NA	-24	-2272	intron_retention	FALSE	canonical	3	128	junction_1	39.8357739838062	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACATGTTTGGAGTGC	NA	False	NA	NA	False	TATAAA	-28	NA	95810476	95802742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95806331_95809036_95809415_95809919
ES.14135.5	chr16	-	3017	7	NNC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	472.672896056741	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTAACTTTATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	95792107	95781137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95781312_95783301_95783439_95784992_95787223_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ES.14135.51	chr16	-	7217	29	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	10	-2272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.6030536842399	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACATGTTTGGAGTGC	NA	False	NA	NA	False	TATAAA	-28	NA	95848633	95802742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806222_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518
ES.14135.52	chr16	-	9017	43	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	23	-2273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	80.937267496755	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACATGTTTGGAGTG	NA	False	NA	NA	False	TATAAA	-27	NA	95883703	95802743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883080_95883301_95883381_95883453
ES.14135.53	chr16	-	6414	24	NNC	ENSMUSG00000022914.18	novel	8547	42	NA	NA	-5744	-2273	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	46.2891789810236	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACATGTTTGGAGTG	NA	False	NA	NA	False	TATAAA	-27	NA	95842574	95802743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806286_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451
ES.14135.54	chr16	-	3334	8	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-12	-2273	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	171.587069585618	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACATGTTTGGAGTG	NA	False	NA	NA	False	TATAAA	-27	NA	95883659	95802743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95811019_95811188_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.55	chr16	-	4743	12	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	121	2031	combination_of_known_junctions	FALSE	canonical	3	82	junction_11	51.7660024365844	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAATCCACGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	95820950	95803028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878
ES.14135.56	chr16	-	8569	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-42	1799	combination_of_known_junctions	FALSE	canonical	3	75	junction_31	102.463997291444	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGGTTTTGAAGCAG	NA	False	NA	0	True	ACTAAA	-24	NA	95883768	95803260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.57	chr16	-	8432	43	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	1	1788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	80.937267496755	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATTTGCACTTGCTGG	NA	False	NA	-11	True	ACTAAA	-13	NA	95883646	95803271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883080_95883301_95883381_95883453
ES.14135.58	chr16	-	2796	8	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-14	1776	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	169.880149829586	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACTGTTACTTTTATT	NA	False	NA	21	True	AATATA	-39	NA	95883661	95803283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.59	chr16	-	4953	10	NNC	ENSMUSG00000022914.18	novel	3834	23	NA	NA	-513	1776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.0331822163341	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACTGTTACTTTTATT	NA	False	NA	21	True	AATATA	-39	NA	95819518	95803283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804540_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780
ES.14135.6	chr16	-	6202	1	NIC	ENSMUSG00000022913.17	novel	1044	7	NA	NA	3755	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAATTGTAACTTTA	NA	False	NA	-19	True	AATAAA	-7	NA	95787343	95781141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95781100_95787300
ES.14135.60	chr16	-	8663	43	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	9	1772	intron_retention	FALSE	canonical	3	75	junction_30	103.271116336504	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCATGACTGTTACTTT	NA	False	NA	17	True	AATATA	-35	NA	95883638	95803287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.61	chr16	-	5934	25	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-5706	1771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	55.8360695846929	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCATGACTGTTACTT	NA	False	NA	16	True	AATATA	-34	NA	95842536	95803288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95840624_95840683_95842451
ES.14135.64	chr16	-	8639	41	NIC	ENSMUSG00000022914.18	novel	1806	14	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	3	75	junction_28	104.9372401724	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	95883720	95806607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.65	chr16	-	8244	41	NNC	ENSMUSG00000022914.18	novel	1806	14	NA	NA	9	-285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	106.783399341845	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGGAATACTGGTTGT	NA	False	NA	NA	False	AATATA	-12	NA	95883619	95806902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860854_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.66	chr16	-	7962	41	NIC	ENSMUSG00000022914.18	novel	1806	14	NA	NA	16	-559	combination_of_known_junctions	FALSE	canonical	3	75	junction_28	104.9372401724	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCACCCTACC	NA	False	NA	NA	False	ATTAAA	-14	NA	95883612	95807176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.67	chr16	-	5871	38	NNC	ENSMUSG00000022914.18	novel	1806	14	NA	NA	-6	-741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.5874190017787	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	95883732	95811464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95812141_95812536_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883079_95883301_95883381_95883453
ES.14135.68	chr16	-	6426	38	ISM	ENSMUSG00000022914.18	ENSMUST00000232755.2	9843	41	-239	10994	-160	-741	5prime_fragment	FALSE	canonical	3	75	junction_25	107.361693522125	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTTTTTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	95883886	95811464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.69	chr16	-	4448	32	ISM	ENSMUSG00000022914.18	ENSMUST00000232755.2	9843	41	-12	21442	-12	-1294	5prime_fragment	FALSE	canonical	3	75	junction_19	116.117624887755	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGCTGCAGTGTCACGG	NA	False	NA	NA	False	NA	NA	NA	95883659	95821912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.70	chr16	-	3129	24	NNC	ENSMUSG00000022914.18	novel	1806	14	NA	NA	2	434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.075166359726	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTTGTAATTATTGG	NA	False	NA	NA	False	TATAAA	-18	NA	95883645	95836627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95836845_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.72	chr16	-	4478	16	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	-6	24	intron_retention	FALSE	canonical	0	0	junction_4	160.055073854804	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTATAAGTGGATATGA	NA	False	NA	NA	False	NA	NA	NA	95883634	95847397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95847734_95848134_95848361_95848518_95848648_95853724_95853793_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.73	chr16	-	4712	2	NIC	ENSMUSG00000022914.18	novel	663	3	NA	NA	-3624	24	intron_retention	FALSE	canonical	3	78	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTATAAGTGGATATGA	NA	False	NA	NA	False	NA	NA	NA	95852267	95847397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95848361_95848518
ES.14135.74	chr16	-	3937	14	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	583	24	intron_retention	FALSE	canonical	3	75	junction_5	94.1173257477982	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTATAAGTGGATATGA	NA	False	NA	NA	False	NA	NA	NA	95883045	95847397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95869828_95883013
ES.14135.75	chr16	-	2759	17	NNC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_8	156.591214931585	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95883642	95847421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860874_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.76	chr16	-	2560	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	-160	-18	-160	18	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTTGGGTTAACTTT	NA	False	NA	63	True	AATAAA	-35	NA	95883886	95867849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.77	chr16	-	2433	4	NNC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-43	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.480274774294	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAATCTTTCTTTGGGTT	NA	False	NA	57	True	AATAAA	-29	NA	95883769	95867855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95869828_95883013_95883080_95883301_95883381_95883453
ES.14135.78	chr16	-	2299	4	NNC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.480274774294	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	45	True	AATAAA	-17	NA	95883651	95867867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95869828_95883013_95883082_95883307_95883381_95883453
ES.14135.79	chr16	-	1622	6	NNC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	174.184270242752	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTAAGTATTCTA	NA	False	NA	38	True	AATAAA	-10	NA	95883660	95867874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95868990_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.82	chr16	-	2522	4	NIC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-43	-7	intron_retention	FALSE	canonical	3	425	junction_3	5.71547606649408	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTAAGTATTCTA	NA	False	NA	38	True	AATAAA	-10	NA	95883769	95867874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95869828_95883013_95883208_95883321_95883381_95883453
ES.14135.85	chr16	-	2266	4	NNC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	203.480274774294	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATATACGTAAGTATT	NA	False	NA	35	True	AATAAA	-7	NA	95883627	95867877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95869828_95883013_95883074_95883298_95883381_95883453
ES.14135.86	chr16	-	2281	4	NNC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.480274774294	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATACGTAAGTAT	NA	False	NA	34	True	AATAAA	-6	NA	95883632	95867878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95869828_95883013_95883082_95883295_95883381_95883453
ES.14135.87	chr16	-	2148	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	94	140	-4	-140	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCTGTGCTGTGTTA	NA	False	NA	-95	True	NA	NA	NA	95883632	95868007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.88	chr16	-	2020	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	67	295	-12	-295	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCCTATAAGCAATGATT	NA	False	NA	NA	False	AATAAA	-17	NA	95883659	95868162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.9	chr16	-	8885	50	Fusion	ENSMUSG00000022913.17_ENSMUSG00000022914.18	novel	9843	41	NA	NA	-3	-9	multi-exon	TRUE	non_canonical	0	0	junction_34	345.559292292648	741	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAATTGTAACTTTA	NA	False	NA	-19	True	AATAAA	-7	NA	95883631	95781141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95803633_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848520_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14135.90	chr16	-	1065	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	-178	1495	-178	-1495	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATTTCTTTTGATATT	NA	False	NA	-1	True	AATAAA	-14	NA	95883904	95869362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ES.14136.1	chr16	+	179	1	Intergenic	novelGene_11826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAGAAAGAAAATAGA	874	False	NA	NA	False	NA	NA	NA	95901417	95901596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95901400_95901600
ES.14137.1	chr16	+	176	1	Intergenic	novelGene_11827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	95913776	95913952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95913800_95914000
ES.14138.1	chr16	+	181	1	Intergenic	novelGene_11828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATCAAGCATGGTGACA	NA	False	NA	NA	False	NA	NA	NA	95916982	95917163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_95917000_95917200
ES.14139.1	chr16	-	196	1	Intergenic	novelGene_11829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGAATGGAAACCAGCA	NA	False	NA	NA	False	NA	NA	NA	95918740	95918544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_95918500_95918700
ES.1414.1	chr1	+	184	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATGAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	135099036	135099220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135099000_135099200
ES.14140.1	chr16	-	2743	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	32	-601	32	601	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCATTGTTGTTTTTTA	NA	False	NA	NA	False	AATACA	-19	NA	95928897	95921216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.11	chr16	-	1196	4	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-21	645	intron_retention	FALSE	canonical	3	5886	junction_3	479.72376310632	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928687	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923618_95925922_95926046_95928352_95928541_95928631
ES.14140.12	chr16	-	1150	5	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	23	645	combination_of_known_splicesites	FALSE	canonical	1	23	junction_4	2876.22863964254	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928906	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928789
ES.14140.13	chr16	-	3684	3	NIC	ENSMUSG00000040681.17	novel	261	5	NA	NA	24	645	intron_retention	FALSE	canonical	3	6089	junction_2	222	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928905	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923618_95925922_95928662_95928789
ES.14140.15	chr16	-	1178	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	26	645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2886.14405392385	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928903	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928758
ES.14140.18	chr16	-	1122	7	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	24	644	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2404.90453148468	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAAATGCCTGATTA	NA	False	NA	-13	True	AATAAA	-17	NA	95928905	95922789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923035_95923090_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.2	chr16	-	2156	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	18	0	18	0	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGAAGCCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	95928911	95921817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.24	chr16	-	1135	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	24	644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAAATGCCTGATTA	NA	False	NA	-13	True	AATAAA	-17	NA	95928905	95922789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928772
ES.14140.25	chr16	-	3613	4	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	24	644	intron_retention	FALSE	canonical	3	5886	junction_3	268.865517808935	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAAATGCCTGATTA	NA	False	NA	-13	True	AATAAA	-17	NA	95928905	95922789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923618_95925922_95928404_95928510_95928541_95928631
ES.14140.27	chr16	-	1179	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	23	642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2565.84309730739	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTGGAAATGCCTGAT	NA	False	NA	-15	True	AATAAA	-15	NA	95928906	95922791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923611_95925913_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.28	chr16	-	1160	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	29	642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3210.85391895815	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTGGAAATGCCTGAT	NA	False	NA	-15	True	AATAAA	-15	NA	95928900	95922791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928740
ES.14140.29	chr16	-	1261	4	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	35	638	intron_retention	FALSE	non_canonical	0	0	junction_3	3210.85391895815	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTATTTGGAAATGCC	NA	False	NA	-19	True	AATAAA	-11	NA	95928894	95922795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928541_95928766
ES.14140.3	chr16	-	1226	4	NNC	ENSMUSG00000040681.17	novel	261	5	NA	NA	-2	689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3210.85391895815	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATGCTTTTTTCTTTC	NA	False	NA	32	True	GATAAA	-13	NA	95928931	95922744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928752
ES.14140.30	chr16	-	1050	5	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	23	638	combination_of_known_splicesites	FALSE	canonical	3	87	junction_1	2606.84776118591	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTATTTGGAAATGCC	NA	False	NA	-19	True	AATAAA	-11	NA	95928906	95922795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923618_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.31	chr16	-	1275	7	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	35	638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2932.22609784595	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTATTTGGAAATGCC	NA	False	NA	-19	True	AATAAA	-11	NA	95928894	95922795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95927839_95927954_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.32	chr16	-	1146	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-15	638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3259.9304655161	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTATTTGGAAATGCC	NA	False	NA	-19	True	AATAAA	-11	NA	95928944	95922795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923426_95923483_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928766
ES.14140.33	chr16	-	728	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	24	1422	24	194	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGTGCATTCGTGTCTGA	NA	False	NA	0	True	AATACA	-30	NA	95928905	95923239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.35	chr16	-	711	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	21	181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2886.14405392385	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGCGTCTCAGTCGTG	NA	False	NA	-13	True	AATACA	-17	NA	95928908	95923252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928766
ES.14140.36	chr16	-	5104	1	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	3	-247	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACAGGATGGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	95928926	95923822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95923800_95928900
ES.14140.37	chr16	-	3313	2	NNC	ENSMUSG00000040681.17	novel	664	3	NA	NA	43	-681	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGGGTGGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	95928886	95924256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95925321_95926637
ES.14140.38	chr16	-	4616	1	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	28	-710	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95928901	95924285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_95924300_95928900
ES.14140.4	chr16	-	1229	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	-24	969	-24	647	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAATGCCTGATTAATT	NA	False	NA	-10	True	AATAAA	-20	NA	95928953	95922786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.6	chr16	-	1316	5	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-119	646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2886.14405392385	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95929048	95922787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928766
ES.14140.8	chr16	-	1029	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	31	645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2565.84309730739	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928898	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923550_95925997_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14140.9	chr16	-	1325	7	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	-5	645	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	2755.22084212661	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATGCCTGATTAA	NA	False	NA	-12	True	AATAAA	-18	NA	95928934	95922788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95923618_95925922_95926046_95928122_95928240_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ES.14141.1	chr16	+	1233	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-73	1335	-73	560	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGTGTTTATGCTGTGC	NA	False	NA	NA	False	AATGAA	-16	NA	95946533	95957717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ES.14141.11	chr16	+	2559	6	NIC	ENSMUSG00000023147.18	novel	2495	5	NA	NA	15	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	169.23309369033	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGGACTGGGTACTGT	NA	False	NA	16	True	AATAAA	-10	NA	95946632	95959038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_95946779_95953012_95953179_95954170_95954239_95954858_95954963_95955280_95955396_95957078
ES.14141.12	chr16	+	2481	5	FSM	ENSMUSG00000023147.18	ENSMUST00000232832.2	2678	5	190	7	183	-1	multi-exon	FALSE	canonical	1	2	junction_1	155.048984195318	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGTACTGTGGAAAGC	NA	False	NA	23	True	AATAAA	-17	NA	95946800	95959045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946966_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ES.14141.13	chr16	+	1798	1	NIC	ENSMUSG00000023147.18	novel	2495	5	NA	NA	1184	16	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTCCGCCTACAAAATC	NA	False	NA	NA	False	NA	NA	NA	95954193	95955991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_95954200_95956000
ES.14141.14	chr16	+	3990	1	NIC	ENSMUSG00000023147.18	novel	2495	5	NA	NA	2046	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGTACTGTGGAAAGC	NA	False	NA	23	True	AATAAA	-17	NA	95955055	95959045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_95955100_95959000
ES.14141.2	chr16	+	1167	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233227.2	1101	4	-68	2	-68	-2	multi-exon	FALSE	canonical	3	306	junction_2	29.6348143611905	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	95946538	95955973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280
ES.14141.3	chr16	+	2522	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-33	6	-33	0	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	False	NA	24	True	AATAAA	-18	NA	95946573	95959046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ES.14141.4	chr16	+	1341	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-13	1167	-13	728	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTCAGTGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	95946593	95957885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ES.14141.5	chr16	+	2673	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	-1	-177	-1	177	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTTCAGCTTTTTA	NA	False	NA	NA	False	AGTAAA	-6	NA	95946605	95959229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ES.14141.7	chr16	+	2289	3	FSM	ENSMUSG00000023147.18	ENSMUST00000233273.2	406	3	-2	-1881	-2	-8	multi-exon	FALSE	canonical	1	3	junction_2	173.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGGACTGGGTACTGT	NA	False	NA	16	True	AATAAA	-10	NA	95946615	95959038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_95946779_95953012_95953179_95957078
ES.14141.8	chr16	+	1190	6	NNC	ENSMUSG00000023147.18	novel	2495	5	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.502473846272	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGGACTGGGTACTG	NA	False	NA	15	True	AATAAA	-9	NA	95946622	95959037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078_95957196_95958469
ES.14141.9	chr16	+	3513	4	NIC	ENSMUSG00000023147.18	novel	2415	4	NA	NA	7	0	intron_retention	FALSE	canonical	3	306	junction_2	29.2612751298063	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	False	NA	24	True	AATAAA	-18	NA	95946624	95959046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_95946779_95953012_95953179_95954170_95955396_95957078
ES.14142.1	chr16	-	376	1	Antisense	novelGene_ENSMUSG00000023147.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95958256	95957880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_-_95957900_95958300
ES.14143.1	chr16	-	1031	2	NNC	ENSMUSG00000045275.18	novel	2737	10	NA	NA	25576	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGGATGTCATATGGT	NA	False	NA	NA	False	AATAAA	-12	NA	95961473	95960116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_95961065_95961390
ES.14144.1	chr16	-	177	1	Intergenic	novelGene_11830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	95968526	95968349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_95968300_95968500
ES.14145.1	chr16	-	161	1	Intergenic	novelGene_11831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTAATTTAGA	925	False	NA	NA	False	NA	NA	NA	96016877	96016716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_96016700_96016900
ES.14146.1	chr16	-	178	1	Intergenic	novelGene_11832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCACCATGGAGCC	NA	False	NA	NA	False	NA	NA	NA	96032278	96032100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_96032100_96032300
ES.14147.1	chr16	+	811	1	Intergenic	novelGene_11833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCGTGTGTATGTACA	9999	False	NA	NA	False	AATAAA	-17	NA	96155418	96156229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_96155400_96156200
ES.14148.1	chr16	+	1997	8	FSM	ENSMUSG00000000159.17	ENSMUST00000081093.10	1554	8	-446	3	-320	0	multi-exon	TRUE	canonical	0	0	junction_1	1.04978131833565	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCTTGTATTATCTTT	5869	False	NA	NA	False	AATAAA	-14	NA	96162547	96205228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_96163045_96165206_96165285_96174029_96174348_96187685_96187827_96192219_96192245_96197568_96197670_96199090_96199165_96204465
ES.14149.1	chr16	+	1173	1	Intergenic	novelGene_11834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAACAGGTAGCAG	NA	False	NA	NA	False	AGTAAA	-4	NA	96559873	96561046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_96559900_96561000
ES.1415.1	chr1	+	177	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	135103654	135103831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135103700_135103800
ES.14150.1	chr16	-	177	1	Intergenic	novelGene_11835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	97058990	97058813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97058800_97059000
ES.14151.1	chr16	-	2344	1	Genic_Genomic	ENSMUSG00000000386.17	novel	NA	NA	NA	NA	4624	1125	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCCTCTGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	97249453	97247109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_97247100_97249500
ES.14152.1	chr16	+	3345	1	Antisense	novelGene_ENSMUSG00000116929.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCGATCAGCTTATAAC	NA	False	NA	NA	False	NA	NA	NA	97265108	97268453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_97265100_97268500
ES.14153.1	chr16	+	362	1	Intergenic	novelGene_11837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	97292342	97292704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_97292300_97292700
ES.14154.1	chr16	-	1145	8	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	44	261	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	16.9115345252878	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTGATCACCTCACGT	NA	False	NA	NA	False	AATGAA	-16	NA	97313686	97271903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277582_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
ES.14154.10	chr16	-	162	1	Intergenic	novelGene_11836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	97289003	97288841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97288800_97289000
ES.14154.2	chr16	-	1660	8	NNC	ENSMUSG00000022938.9	novel	972	8	NA	NA	11	261	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	13.697906886135	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTGATCACCTCACGT	NA	False	NA	NA	False	AATGAA	-16	NA	97313719	97271903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313178
ES.14154.3	chr16	-	1095	7	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	39	225	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	19.6079632349263	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTCTGGGGAATGA	NA	False	NA	NA	False	AATACA	-13	NA	97313691	97271939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277457_97277631_97279548_97279608_97282986_97283111_97313657
ES.14154.5	chr16	-	1573	8	NNC	ENSMUSG00000022938.9	novel	972	8	NA	NA	76	-5	intron_retention	FALSE	canonical	0	0	junction_5	21.6314208351402	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCTGAATGTCACAGG	NA	False	NA	-15	True	AATAAA	-19	NA	97313654	97272294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97272424_97276447_97276581_97276934_97277631_97279548_97279608_97282986_97283111_97289117_97289209_97302059_97302204_97313457
ES.14154.6	chr16	-	816	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	-15	5	-15	-5	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCTGAATGTCACAGG	NA	False	NA	-15	True	AATAAA	-19	NA	97313745	97272294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
ES.14154.7	chr16	-	808	8	NNC	ENSMUSG00000022938.9	novel	806	8	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	13.0384048104053	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCTGAATGTCACAGG	NA	False	NA	-15	True	AATAAA	-19	NA	97313709	97272294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313629
ES.14154.8	chr16	-	640	7	NIC	ENSMUSG00000022938.9	novel	806	8	NA	NA	13	-9	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	15.0268278607148	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTCAGCTGAATGTCA	NA	False	NA	-19	True	AATAAA	-15	NA	97313717	97272298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97313657
ES.14154.9	chr16	-	386	4	NIC	ENSMUSG00000022938.9	novel	806	8	NA	NA	0	-5211	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	19.2930615046504	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAGAGTTCCTTT	NA	False	NA	NA	False	ACTAAA	-43	NA	97313730	97277500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97277631_97279548_97279608_97282986_97283111_97313657
ES.14155.1	chr16	+	2419	14	FSM	ENSMUSG00000023341.16	ENSMUST00000188251.7	2421	14	2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.87477809337753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTTTGAATTGGGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	97337282	97362100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_97337374_97339817_97339930_97345667_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357160_97357320_97357801_97357879_97359719_97359969_97361538
ES.14156.1	chr16	-	1364	1	Intergenic	novelGene_11838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97520643	97519279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97519300_97520600
ES.14157.1	chr16	-	3586	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	5	0	5	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	2	True	AATAAA	-22	NA	97564982	97543132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
ES.14157.3	chr16	-	4882	7	NIC	ENSMUSG00000005251.16	novel	3591	8	NA	NA	58	-2	intron_retention	FALSE	canonical	3	41	junction_1	8.88194172964948	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGCAGACTATTATTTC	NA	False	NA	0	True	AATAAA	-20	NA	97564929	97543134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97552843_97556267_97556560_97564727
ES.14157.4	chr16	-	6028	7	ISM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	5722	9	5722	-9	3prime_fragment	FALSE	canonical	3	41	junction_1	10.1434160364686	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGAATTCGCAGACTA	NA	False	NA	-7	True	AATAAA	-13	NA	97559265	97543141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267
ES.14158.1	chr16	+	2765	1	Antisense	novelGene_ENSMUSG00000014039.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACCGAGGGCTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	97619584	97622349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_97619600_97622300
ES.14159.1	chr16	+	3308	1	Intergenic	novelGene_11842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTTGATCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	97763975	97767283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_97764000_97767300
ES.1416.1	chr1	+	2569	2	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTGGTTGGTTTTTT	20	False	NA	NA	False	NA	NA	NA	135108981	135112672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135109169_135110290
ES.14160.1	chr16	-	6638	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-4	398	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGTAAGAGTCTTTTTA	6479	False	NA	NA	False	NA	NA	NA	97653054	97592268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.10	chr16	-	6175	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5540973018773	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCTGGCCCTCTGCTC	6491	False	NA	-3	True	AATAAA	-22	NA	97653042	97592722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600433_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.100	chr16	-	3554	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	-16	1925	-9	3	multi-exon	FALSE	canonical	3	32	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGATGAATTAATACT	NA	False	NA	2	True	AATAAA	-30	NA	97763831	97750957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97763613
ES.14160.101	chr16	-	3096	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-21	-3	-8	3	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGATGAATTAATACT	NA	False	NA	2	True	AATAAA	-30	NA	97763830	97750957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ES.14160.102	chr16	-	3633	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231560.2	397	3	-46	-3190	-46	1	multi-exon	FALSE	canonical	2	12	junction_2	37	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTGGGATGAATTAATA	NA	False	NA	0	True	AATAAA	-28	NA	97763868	97750959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763712
ES.14160.103	chr16	-	1486	3	FSM	ENSMUSG00000046962.17	ENSMUST00000232187.2	1452	3	-30	-4	-1	1	multi-exon	FALSE	canonical	2	7	junction_1	12.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTGGGATGAATTAATA	NA	False	NA	0	True	AATAAA	-28	NA	97763823	97750959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97754127_97754294_97763613
ES.14160.104	chr16	-	2943	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGGGATGAATTAAT	NA	False	NA	-1	True	AATAAA	-27	NA	97763823	97750960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763613
ES.14160.105	chr16	-	3448	2	NIC	ENSMUSG00000046962.17	novel	1452	3	NA	NA	-8	0	intron_retention	FALSE	canonical	3	25	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	NA	False	NA	-4	True	AATAAA	-24	NA	97763830	97750963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97754294_97763712
ES.14160.106	chr16	-	3993	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	-312	2329	-311	0	multi-exon	FALSE	canonical	3	60	junction_2	13	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	NA	False	NA	-4	True	AATAAA	-24	NA	97764133	97750963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763613
ES.14160.107	chr16	-	8178	3	ISM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	404	3	388	0	3prime_fragment	FALSE	canonical	3	41	junction_1	22.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	341	False	NA	-4	True	AATAAA	-24	NA	97763405	97750963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97752070_97752669_97754294_97757957
ES.14160.109	chr16	-	1620	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	32.8734948958377	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	False	NA	-6	True	AATAAA	-22	NA	97763820	97750965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97754127_97754294_97757957_97758101_97763613
ES.14160.11	chr16	-	6180	23	NNC	ENSMUSG00000014039.19	novel	6346	24	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.134536567109	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCTGGCCCTCTGCTC	7100	False	NA	-3	True	AATAAA	-22	NA	97652433	97592722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600252_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652250
ES.14160.110	chr16	-	2836	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	8	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	False	NA	-6	True	AATAAA	-22	NA	97763820	97750965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763712
ES.14160.111	chr16	-	4681	1	NIC	ENSMUSG00000046962.17	novel	6010	3	NA	NA	-1348	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	8100	False	NA	-6	True	AATAAA	-22	NA	97755646	97750965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97751000_97755600
ES.14160.112	chr16	-	4036	3	NNC	ENSMUSG00000046962.17	novel	6010	3	NA	NA	330	-2	intron_retention	FALSE	canonical	3	5	junction_2	40.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	-3	True	NA	-6	True	AATAAA	-22	NA	97763463	97750965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97754294_97757957_97758101_97762898
ES.14160.113	chr16	-	3899	2	NNC	ENSMUSG00000046962.17	novel	5463	2	NA	NA	324	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	-9	True	NA	-6	True	AATAAA	-22	NA	97763469	97750965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97754294_97762898
ES.14160.114	chr16	-	4988	2	ISM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	4202	2333	4174	-4	3prime_fragment	FALSE	canonical	3	86	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTAAGTTTGGGATG	4127	False	NA	-8	True	AATAAA	-20	NA	97759619	97750967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97754294_97757957
ES.14160.115	chr16	-	3653	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231263.2	889	3	-8	-2756	0	-10	multi-exon	FALSE	canonical	2	6	junction_2	40	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGAATTTTAAGTTT	NA	False	NA	-14	True	AATAAA	-14	NA	97763809	97750973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758095_97763613
ES.14160.116	chr16	-	3425	4	NNC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	332	-11	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	33.1360830515618	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTTGAATTTTAAGTT	-1	True	NA	-15	True	AATAAA	-13	NA	97763461	97750974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97752070_97752669_97754294_97757957_97758101_97762898
ES.14160.12	chr16	-	6044	23	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	10.8372635379848	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCTGGCCCTCTGCTC	6532	False	NA	-3	True	AATAAA	-22	NA	97653001	97592722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.15	chr16	-	5809	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	8.90996765591714	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGTGAATGGTAATG	6514	False	NA	NA	False	AATAAA	-18	NA	97653019	97593077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.16	chr16	-	3956	11	NNC	ENSMUSG00000014039.19	novel	5623	23	NA	NA	-129469	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.7840487520902	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGTGAATGGTAATG	NA	False	NA	NA	False	AATAAA	-18	NA	97782519	97593077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97608977_97782444
ES.14160.17	chr16	-	5813	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	11.2545726896769	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGTGAATGGTAATG	6491	False	NA	NA	False	AATAAA	-18	NA	97653042	97593077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641165_97652968
ES.14160.18	chr16	-	5464	24	FSM	ENSMUSG00000014039.19	ENSMUST00000095849.10	6346	24	19	863	19	2	multi-exon	FALSE	canonical	2	5	junction_23	10.6974194368874	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATTTTTTAAAGATG	7125	False	NA	NA	False	AATAAA	-17	NA	97652408	97593529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652250
ES.14160.20	chr16	-	6004	23	NNC	ENSMUSG00000014039.19	novel	6346	24	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.1340587342327	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	7113	False	NA	NA	False	AATAAA	-16	NA	97652420	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604943_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609765_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652250
ES.14160.21	chr16	-	5372	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6483	False	NA	NA	False	AATAAA	-16	NA	97653050	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.22	chr16	-	5150	23	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	12.9379479001799	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6512	False	NA	NA	False	AATAAA	-16	NA	97653021	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.24	chr16	-	5470	24	NIC	ENSMUSG00000014039.19	novel	6346	24	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	10.5890766558487	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	7103	False	NA	NA	False	AATAAA	-16	NA	97652430	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652250
ES.14160.25	chr16	-	5354	24	FSM	ENSMUSG00000014039.19	ENSMUST00000121584.8	6194	24	29	811	29	1	multi-exon	FALSE	canonical	0	0	junction_23	11.3557360404684	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6512	False	NA	NA	False	AATAAA	-16	NA	97653021	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.26	chr16	-	5274	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	8.90996765591714	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTATTTTTTAAAGAT	6494	False	NA	NA	False	AATAAA	-16	NA	97653039	97593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.27	chr16	-	5355	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	11.4322199145185	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTATTTTTTAAAGA	6480	False	NA	NA	False	AATAAA	-15	NA	97653053	97593531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604943_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.28	chr16	-	5261	23	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	13.0311927109944	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTTATTTTTTAAAG	6508	False	NA	NA	False	AATAAA	-14	NA	97653025	97593532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617397_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.3	chr16	-	12632	21	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	31	-8	intron_retention	TRUE	canonical	1	1	junction_5	12.1453694879983	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGAGAATGGCTCTG	6514	False	NA	45	True	GATAAA	-13	NA	97653019	97592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97603300_97604473_97605042_97607244_97607365_97607674_97608373_97608921_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.30	chr16	-	5925	23	NNC	ENSMUSG00000014039.19	novel	5623	23	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0738525245893	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTTTTATTTTTTAA	6532	False	NA	NA	False	AATAAA	-12	NA	97653001	97593534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609765_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.31	chr16	-	5502	25	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	14.0356070010844	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTTTTATTTTTTAA	6502	False	NA	NA	False	AATAAA	-12	NA	97653031	97593534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638360_97638518_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.32	chr16	-	5212	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	29	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	12.3806972144572	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTCAACCGCAGTT	6512	False	NA	NA	False	NA	NA	NA	97653021	97593676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618044_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.33	chr16	-	5197	25	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-18	-168	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	13.2623108427185	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATAGCCCTAATCTAT	6532	False	NA	NA	False	AATAAA	-36	NA	97653001	97593699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97616400_97616531_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.34	chr16	-	5134	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-22	-169	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.464649508599	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCCATAGCCCTAATCTA	6528	False	NA	NA	False	AATAAA	-35	NA	97653005	97593700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613892_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.35	chr16	-	3569	2	ISM	ENSMUSG00000014039.19	ENSMUST00000131951.8	3541	5	3239	170	856	-170	3prime_fragment	FALSE	canonical	3	54	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATCCATAGCCCTAATCT	NA	False	NA	NA	False	AATAAA	-34	NA	97598263	97593701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97595857_97596849
ES.14160.37	chr16	-	5191	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	2	-174	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCAATCCATAGCCCTA	6485	False	NA	NA	False	AATAAA	-30	NA	97653048	97593705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.38	chr16	-	5106	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	0	-178	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	8.90996765591714	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGCAGGCAATCCATAGC	6483	False	NA	NA	False	AATAAA	-26	NA	97653050	97593709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.39	chr16	-	5085	23	NIC	ENSMUSG00000014039.19	novel	5623	23	NA	NA	1	-183	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	10.7258280999535	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGGGCAGGCAATCC	6484	False	NA	NA	False	AATAAA	-21	NA	97653049	97593714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.4	chr16	-	6238	24	FSM	ENSMUSG00000014039.19	ENSMUST00000121584.8	6194	24	1	-45	1	-8	multi-exon	FALSE	canonical	0	0	junction_23	11.3557360404684	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGAGAATGGCTCTG	6484	False	NA	45	True	GATAAA	-13	NA	97653049	97592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.42	chr16	-	4122	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-22	982	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGTCAGTCCCTGTCCA	6528	False	NA	NA	False	GATAAA	-15	NA	97653005	97594735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.43	chr16	-	1995	1	NIC	ENSMUSG00000014039.19	novel	6346	24	NA	NA	477	101	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAGAACACATAAAAC	NA	False	NA	NA	False	NA	NA	NA	97600312	97598317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97598300_97600300
ES.14160.44	chr16	-	6603	21	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	8	75	intron_retention	FALSE	canonical	1	1	junction_2	11.2377711313232	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	6491	False	NA	NA	False	NA	NA	NA	97653042	97598343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97598978_97600253_97603300_97604473_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.45	chr16	-	3513	1	Intergenic	novelGene_11839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97630637	97627124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97627100_97630600
ES.14160.46	chr16	-	4115	5	ISM	ENSMUSG00000014039.19	ENSMUST00000095849.10	6346	24	-23	40743	-23	3156	5prime_fragment	FALSE	canonical	2	5	junction_4	15.8015030930605	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTGGATTCTTTGTCC	7083	False	NA	NA	False	AATAAA	-15	NA	97652450	97633409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652250
ES.14160.47	chr16	-	1135	1	Genic_Genomic	ENSMUSG00000014039.19	novel	NA	NA	NA	NA	139	-12829	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCACTAAGTTTTCTC	6689	False	NA	NA	False	AATAAA	-26	NA	97652844	97651709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_97651700_97652800
ES.14160.48	chr16	-	6558	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-5	3	-5	-3	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGGTTCCGAGTGCCG	NA	False	NA	-1	True	AATAAA	-24	NA	97723838	97656411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.49	chr16	-	6100	14	Fusion	ENSMUSG00000045975.9_ENSMUSG00000046962.17	novel	6556	14	NA	NA	-8	-3	multi-exon	FALSE	canonical	0	0	junction_10	33.6917808177982	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGGTTCCGAGTGCCG	NA	False	NA	-1	True	AATAAA	-24	NA	97763830	97656411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691205_97691319_97693389_97693510_97713805_97713905_97763712
ES.14160.5	chr16	-	6001	23	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	13.6714699615327	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6531	False	NA	0	True	AATAAA	-25	NA	97653002	97592719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.50	chr16	-	6499	14	NIC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	33	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	26.149999717153	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTTGGTTCCGAGTGC	NA	False	NA	-3	True	AATAAA	-22	NA	97723773	97656413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691205_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.51	chr16	-	6166	14	Fusion	ENSMUSG00000045975.9_ENSMUSG00000046962.17	novel	6556	14	NA	NA	-2	-15	multi-exon	FALSE	canonical	1	2	junction_13	26.5082325048756	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTAAGCCGAGTTGG	NA	False	NA	-13	True	AATAAA	-12	NA	97763817	97656423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97763613
ES.14160.52	chr16	-	4530	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-6	2032	-6	1509	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGGTACAGGCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	97723839	97658440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.53	chr16	-	4490	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	1	1507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	33.3578410891679	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTGGTACAGGCCTG	NA	False	NA	NA	False	AATAAA	-20	NA	97723805	97658442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687405_97691213_97691319_97693387_97693510_97713805_97713905_97723254
ES.14160.55	chr16	-	4030	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	37	2489	10	1052	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGCTTACAAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	97723796	97658897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.56	chr16	-	3935	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-2	2623	-2	918	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCTTGTCCACTGAA	NA	False	NA	NA	False	NA	NA	NA	97723835	97659031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.58	chr16	-	3545	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-5	3016	-5	525	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCATTGTGGGTTCA	NA	False	NA	NA	False	CATAAA	-28	NA	97723838	97659424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.59	chr16	-	2883	13	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.6656249796542	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTCTATGCAGATTGT	NA	False	NA	2	True	ATTAAA	-19	NA	97723805	97659943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684602_97691205_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.6	chr16	-	6967	23	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	29	0	intron_retention	FALSE	canonical	3	9	junction_14	9.11009339430132	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6512	False	NA	0	True	AATAAA	-25	NA	97653021	97592719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.60	chr16	-	3024	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-5	3537	-5	4	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTCTATGCAGATT	NA	False	NA	0	True	ATTAAA	-17	NA	97723838	97659945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.61	chr16	-	3018	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	25.6796375944492	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGTTCTATGCAGAT	NA	False	NA	-1	True	ATTAAA	-16	NA	97723839	97659946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687405_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.63	chr16	-	2881	13	NIC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	27.1932385386923	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTGTGTTCTATGCA	NA	False	NA	-4	True	ATTAAA	-13	NA	97723804	97659949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97693389_97693510_97713805_97713905_97723254
ES.14160.64	chr16	-	3002	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.9514136591173	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTGTGTTCTATGCA	NA	False	NA	-4	True	ATTAAA	-13	NA	97723806	97659949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713919_97723254
ES.14160.65	chr16	-	3101	15	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.230119643664	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAAGTGTGTTCTATGC	NA	False	NA	-5	True	ATTAAA	-12	NA	97723838	97659950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97661535_97661618_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.66	chr16	-	2982	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	25.8884726809343	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAGTGTGTTCTAT	NA	False	NA	-7	True	ATTAAA	-10	NA	97723805	97659952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693504_97713801_97713905_97723254
ES.14160.67	chr16	-	2946	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.7626180489808	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAGTGTGTTCTAT	NA	False	NA	-7	True	ATTAAA	-10	NA	97723793	97659952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676441_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713881_97723254
ES.14160.68	chr16	-	2969	14	NIC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	26.7539744323903	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAGTGTGTTCTAT	NA	False	NA	-7	True	ATTAAA	-10	NA	97723805	97659952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97660777_97669791_97670102_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.69	chr16	-	2798	15	Fusion	ENSMUSG00000045975.9_ENSMUSG00000046962.17	novel	6556	14	NA	NA	-9	-2	multi-exon	FALSE	canonical	0	0	junction_13	35.249837168534	352	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAGTGTGTTCTAT	NA	False	NA	-7	True	ATTAAA	-10	NA	97763831	97659952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687408_97691213_97691319_97693389_97693510_97713805_97713905_97737798_97737949_97763613
ES.14160.7	chr16	-	6797	23	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.906119706419	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGGCCCTCTGCTCT	6502	False	NA	-2	True	AATAAA	-23	NA	97653031	97592721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609765_97609854_97609987_97612256_97612352_97613757_97613926_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.70	chr16	-	2991	14	NIC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	26.149999717153	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAAGTGTGTTCTAT	NA	False	NA	-7	True	ATTAAA	-10	NA	97723804	97659952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691205_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.72	chr16	-	2960	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	25.8884726809343	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATACTAAGTGTGTTCT	NA	False	NA	-9	True	ATTAAA	-8	NA	97723803	97659954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713825_97713905_97723254
ES.14160.73	chr16	-	2666	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	2	152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.586689733886	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATGTGTGATCTGATG	NA	False	NA	NA	False	CATAAA	-21	NA	97723804	97660267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684595_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.74	chr16	-	2554	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	-3	4005	-3	6	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGTGTGTATGGCTAG	NA	False	NA	NA	False	NA	NA	NA	97723836	97660413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ES.14160.75	chr16	-	1763	1	Intergenic	novelGene_11840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97689802	97688039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97688000_97689800
ES.14160.76	chr16	-	179	1	Intergenic	novelGene_11841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGTTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	97741069	97740890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97740900_97741100
ES.14160.77	chr16	-	10638	2	NIC	ENSMUSG00000046962.17	novel	5463	2	NA	NA	0	798	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	-3	True	NA	NA	NA	97763815	97743758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97754294_97763712
ES.14160.78	chr16	-	8415	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	1	-2953	1	-1523	multi-exon	FALSE	canonical	3	32	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCACATATCCCAACCCT	NA	False	NA	NA	False	NA	NA	NA	97763814	97746079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97763613
ES.14160.79	chr16	-	6644	2	FSM	ENSMUSG00000046962.17	ENSMUST00000231256.2	2735	2	975	-4884	975	-1523	multi-exon	FALSE	canonical	3	41	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCACATATCCCAACCCT	NA	False	NA	NA	False	NA	NA	NA	97753323	97746079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669
ES.14160.8	chr16	-	6547	23	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_22	11.6044484203471	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGGCCCTCTGCTCT	6480	False	NA	-2	True	AATAAA	-23	NA	97653053	97592721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ES.14160.80	chr16	-	7051	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-11	-3968	1	1642	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAGTCTCATTTCTTG	NA	False	NA	NA	False	NA	NA	NA	97763820	97746992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ES.14160.81	chr16	-	5263	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTATTGTTTTCTTTAT	NA	False	NA	0	True	AATATA	-20	NA	97763818	97748635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763613
ES.14160.82	chr16	-	5997	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	12	1	0	-1	multi-exon	FALSE	canonical	3	60	junction_2	13	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTATTGTTTTCTTTAT	NA	False	NA	0	True	AATATA	-20	NA	97763809	97748635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763613
ES.14160.83	chr16	-	5303	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	30.4448499567478	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTTATTGTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	97763817	97748638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97757957_97758101_97763712
ES.14160.84	chr16	-	5400	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-6	-2322	0	-4	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTTATTGTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	97763815	97748638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ES.14160.85	chr16	-	5893	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	-36	-394	-29	-4	multi-exon	FALSE	canonical	3	32	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTTATTGTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	97763851	97748638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97763613
ES.14160.86	chr16	-	4158	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-311	-7	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	36.1201698039567	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACTTGTTATTGTTTT	NA	False	NA	-6	True	AATATA	-14	NA	97764133	97748641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97754127_97754294_97757957_97758101_97763712
ES.14160.87	chr16	-	5905	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231560.2	397	3	-1	-5507	-1	-8	multi-exon	FALSE	canonical	2	12	junction_2	37	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAACTTGTTATTGTTT	NA	False	NA	-7	True	AATATA	-13	NA	97763823	97748642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763712
ES.14160.88	chr16	-	5006	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-6	-1928	0	0	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCAGTTGTGGTTTTT	NA	False	NA	0	True	AATAAA	-21	NA	97763815	97749032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ES.14160.89	chr16	-	4866	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATAATGCAGTTGTGG	NA	False	NA	-5	True	AATAAA	-16	NA	97763823	97749037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763613
ES.14160.9	chr16	-	6069	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	8.90996765591714	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGGCCCTCTGCTCT	6508	False	NA	-2	True	AATAAA	-23	NA	97653025	97592721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
ES.14160.90	chr16	-	5677	2	NIC	ENSMUSG00000046962.17	novel	397	3	NA	NA	-311	-5	intron_retention	FALSE	canonical	3	25	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATAATGCAGTTGTGG	NA	False	NA	-5	True	AATAAA	-16	NA	97764133	97749037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97754294_97763712
ES.14160.91	chr16	-	5187	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231263.2	889	3	-29	-4269	-8	-428	multi-exon	FALSE	canonical	2	6	junction_2	40	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCATCTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	97763830	97749460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758095_97763613
ES.14160.92	chr16	-	4342	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-1	-430	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	8	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGCCATCTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	97763823	97749462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763712
ES.14160.93	chr16	-	4532	4	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	-48	-430	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	30.4448499567478	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGCCATCTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	97763870	97749462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97757957_97758101_97763712
ES.14160.94	chr16	-	4576	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	-6	-1498	0	-430	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGCCATCTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	97763815	97749462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ES.14160.95	chr16	-	4432	3	NIC	ENSMUSG00000046962.17	novel	3072	4	NA	NA	0	-431	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	4.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGCCATCTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	97763815	97749463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97752070_97752669_97754294_97763613
ES.14160.96	chr16	-	4808	2	NIC	ENSMUSG00000046962.17	novel	397	3	NA	NA	-9	-572	intron_retention	FALSE	canonical	3	25	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATAGAAGCTATATGT	NA	False	NA	NA	False	AATAAA	-18	NA	97763831	97749604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97754294_97763712
ES.14160.97	chr16	-	4841	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	-9	1178	-8	-780	multi-exon	FALSE	canonical	3	60	junction_2	13	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAAAGGGAAGATCAC	NA	False	NA	NA	False	ATTAAA	-42	NA	97763830	97749812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763613
ES.14160.98	chr16	-	4188	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	4	1818	-2	508	multi-exon	FALSE	canonical	3	60	junction_2	13	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATCAGTGATGGTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	97763817	97750452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_-_97754294_97757957_97758101_97763613
ES.14160.99	chr16	-	3937	2	NIC	ENSMUSG00000046962.17	novel	5463	2	NA	NA	0	501	intron_retention	FALSE	canonical	3	25	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCATACAATCAGTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	97763815	97750459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97754294_97763712
ES.14161.1	chr16	+	161	1	Intergenic	novelGene_11843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	97792785	97792946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_97792800_97792900
ES.14162.1	chr16	+	520	4	ISM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	-38	5806	-19	309	5prime_fragment	FALSE	canonical	3	112	junction_3	8.80656320908194	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCAATCAATATGGT	NA	False	NA	NA	False	NA	NA	NA	97798495	97811509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318
ES.14162.10	chr16	+	1020	3	ISM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	12783	-640	1488	-1	3prime_fragment	FALSE	canonical	2	6	junction_1	12	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	13	True	NA	NA	NA	97811316	97817955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_97811369_97816865_97816920_97817041
ES.14162.11	chr16	+	2874	2	Antisense	novelGene_ENSMUSG00000116673.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCCATGTGTCTC	NA	False	NA	10	True	NA	NA	NA	97811961	97815846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_97812073_97813083
ES.14162.12	chr16	+	672	2	Genic_Genomic	ENSMUSG00000080717.11	novel	1230	5	NA	NA	4390	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	13	True	NA	NA	NA	97814218	97817955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_+_97814258_97817322
ES.14162.13	chr16	+	1599	1	NIC	ENSMUSG00000080717.11	novel	546	5	NA	NA	21208	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTGTCTTAGCTACA	NA	False	NA	NA	False	NA	NA	NA	97831036	97832635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_+_97831000_97832600
ES.14162.14	chr16	+	2624	1	Intergenic	novelGene_11846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	97837771	97840395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_+_97837800_97840400
ES.14162.2	chr16	+	1294	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	-65	1	-16	-1	multi-exon	FALSE	canonical	3	30	junction_4	45.9292934846597	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	13	True	NA	NA	NA	97798498	97817955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
ES.14162.3	chr16	+	2479	1	FSM	ENSMUSG00000080717.11	ENSMUST00000183578.2	2449	1	-30	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTGTCAAATGTTTG	NA	False	NA	NA	False	NA	NA	NA	97798516	97800995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_97798500_97801000
ES.14162.4	chr16	+	1328	5	NNC	ENSMUSG00000080717.11	novel	669	6	NA	NA	4	2655	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	52.3754474921217	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATAG	NA	False	NA	6	True	NA	NA	NA	97798518	97813855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811852_97813366
ES.14162.5	chr16	+	1983	6	NNC	ENSMUSG00000080717.11	novel	672	5	NA	NA	-3	7394	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	55.5215273565128	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	97798519	97840395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832693_97832871_97838948
ES.14162.6	chr16	+	379	3	FSM	ENSMUSG00000080717.11	ENSMUST00000122450.8	1298	3	8	911	-3	81	multi-exon	FALSE	canonical	3	115	junction_2	8.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGCACTACTTTAA	NA	False	NA	NA	False	NA	NA	NA	97798530	97810289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_97798637_97809828_97809956_97810143
ES.14162.7	chr16	+	1222	4	ISM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	16	5050	3	1065	5prime_fragment	FALSE	canonical	3	112	junction_3	8.80656320908194	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTAATCACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	97798549	97812265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318
ES.14162.8	chr16	+	1291	6	FSM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	18	-640	5	-1	multi-exon	FALSE	canonical	2	6	junction_4	50.8409283943557	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	13	True	NA	NA	NA	97798551	97817955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97817041
ES.14162.9	chr16	+	3957	6	NNC	ENSMUSG00000080717.11	novel	669	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	59.0199966113181	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	12	True	NA	NA	NA	97798551	97817954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97812743_97812913_97814377_97817157
ES.14163.1	chr16	-	3494	1	Intergenic	novelGene_11844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTTGTTTTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	97827289	97823795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97823800_97827300
ES.14164.1	chr16	-	164	1	Intergenic	novelGene_11845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTGCCTGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	97827454	97827290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97827300_97827500
ES.14165.1	chr16	-	699	1	Intergenic	novelGene_11847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAATTAAAAAAAA	3183	False	NA	NA	False	NA	NA	NA	97848641	97847942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97847900_97848600
ES.14166.1	chr16	+	1535	1	Antisense	novelGene_ENSMUSG00000116673.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	97852700	97854235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr16_+_97852700_97854200
ES.14167.1	chr16	-	5686	1	Genic_Genomic	ENSMUSG00000116673.2	novel	NA	NA	NA	NA	27273	3131	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCCCAGGACCAA	NA	False	NA	NA	False	NA	NA	NA	97855884	97850198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr16_-_97850200_97855900
ES.14168.1	chr16	-	8552	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	11	6282	-7	4100	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAACCAAACCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	97883199	97859611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
ES.14168.2	chr16	-	7976	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	-11	6880	-11	3502	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTGTGCTCAGCAATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	97883221	97860209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
ES.14168.3	chr16	-	7733	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	-428	7540	12	2842	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTCTTTCATCATCCA	NA	False	NA	2	True	TTTAAA	-9	NA	97883638	97860869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
ES.14168.4	chr16	-	7317	4	NIC	ENSMUSG00000116673.2	novel	2142	5	NA	NA	-29	2841	intron_retention	FALSE	canonical	3	11	junction_3	25.8069758011279	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGTCTTTCATCATCC	NA	False	NA	1	True	TTTAAA	-8	NA	97883679	97860870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr16_-_97867866_97868954_97869016_97869203_97869331_97883545
ES.14168.5	chr16	-	2508	4	ISM	ENSMUSG00000116673.2	ENSMUST00000231268.2	2142	5	-29	1968	-29	964	5prime_fragment	FALSE	canonical	3	11	junction_3	25.8069758011279	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTTGGTCATAGTAT	NA	False	NA	NA	False	NA	NA	NA	97883679	97865679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883545
ES.14168.6	chr16	-	2481	4	ISM	ENSMUSG00000116673.2	ENSMUST00000232614.2	497	5	14	12350	-4	964	5prime_fragment	FALSE	canonical	3	34	junction_3	16.6599986661331	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTTGGTCATAGTAT	NA	False	NA	NA	False	NA	NA	NA	97883196	97865679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr16_-_97867866_97868954_97869016_97869203_97869331_97883089
ES.14168.7	chr16	-	1714	5	NNC	ENSMUSG00000116673.2	novel	1556	5	NA	NA	4	964	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.6211851727154	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTTGGTCATAGTAT	NA	False	NA	NA	False	NA	NA	NA	97883188	97865679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr16_-_97866093_97866851_97867866_97868954_97869016_97869203_97869331_97883089
ES.14168.8	chr16	-	3057	2	Intergenic	novelGene_11848	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	97874676	97871573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr16_-_97873362_97873407
ES.14169.1	chr17	-	468	1	FSM	ENSMUSG00000068141.6	ENSMUST00000089221.3	720	1	410	-158	410	158	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAGATGTCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	3094598	3094130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3094100_3094600
ES.1417.1	chr1	+	511	2	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCTTGGCTCCATTAT	9741	False	NA	NA	False	NA	NA	NA	135118702	135122483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135118956_135122225
ES.14170.1	chr17	+	1336	1	Intergenic	novelGene_11850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCCACTAAACCTAG	4184	False	NA	NA	False	NA	NA	NA	3119469	3120805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3119500_3120800
ES.14171.1	chr17	-	3347	9	NNC	ENSMUSG00000023795.17	novel	1175	7	NA	NA	-18	14148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.63790805271381	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTGTCTGATTGTC	NA	False	NA	NA	False	NA	NA	NA	3134375	3112704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3114736_3119281_3119347_3126774_3127058_3127567_3127722_3127962_3128110_3129350_3129596_3129743_3129867_3131143_3131310_3134242
ES.14171.2	chr17	-	3150	7	NNC	ENSMUSG00000023795.17	novel	1175	7	NA	NA	10	14147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.63623737154524	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTGTCTGATTGT	NA	False	NA	NA	False	NA	NA	NA	3134305	3112705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3114736_3119281_3119347_3126774_3127058_3127567_3127722_3127962_3128110_3129458_3129867_3134242
ES.14171.3	chr17	-	3157	8	NNC	ENSMUSG00000023795.17	novel	1175	7	NA	NA	3070	14147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4.7723694538543	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTGTCTGATTGT	NA	False	NA	NA	False	NA	NA	NA	3131245	3112705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3114736_3119281_3119347_3126774_3127058_3127567_3127722_3127962_3128110_3129274_3129414_3129629_3129867_3131143
ES.14171.4	chr17	-	3225	9	NNC	ENSMUSG00000023795.17	novel	1175	7	NA	NA	-4	14141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4.91012983535059	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCTCTTGTTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	3134319	3112711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3114736_3115984_3116084_3119281_3119347_3126774_3127058_3127567_3127722_3127962_3128110_3129274_3129414_3129629_3129867_3134242
ES.14171.5	chr17	-	6279	1	Intergenic	novelGene_11849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGAGTGGGTAGGGAA	NA	False	NA	NA	False	NA	NA	NA	3123675	3117396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3117400_3123700
ES.14172.1	chr17	-	334	1	Intergenic	novelGene_11851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3139823	3139489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3139500_3139800
ES.14172.2	chr17	-	173	1	Intergenic	novelGene_11852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACTCAAT	NA	False	NA	NA	False	NA	NA	NA	3139820	3139647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3139600_3139800
ES.14173.1	chr17	+	1643	1	Intergenic	novelGene_11853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACCCTA	NA	False	NA	NA	False	NA	NA	NA	3155491	3157134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3155500_3157100
ES.14174.1	chr17	-	1257	4	FSM	ENSMUSG00000116995.2	ENSMUST00000232087.2	1210	4	-62	15	-62	-15	multi-exon	FALSE	canonical	2	4	junction_1	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165132	3162079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3162848_3163562_3163623_3164462_3164621_3164861
ES.14174.2	chr17	-	1695	3	NNC	ENSMUSG00000116995.2	novel	1210	4	NA	NA	-78	-15	intron_retention	FALSE	canonical	3	9	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	3165148	3162079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3163029_3163562_3163623_3164462
ES.14175.1	chr17	+	4409	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-42	-496	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	39.4467978611173	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTATAGACATTGTTCT	9397	False	NA	NA	False	NA	NA	NA	3165204	3248638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209447_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.10	chr17	+	5425	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-27	60039	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	44.5786944627139	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGCAAGTCCTTTC	9412	False	NA	19	True	AATAAA	-13	NA	3165219	3309173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.11	chr17	+	5051	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	53.1422170980402	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9414	False	NA	8	True	AATAAA	-15	NA	3165221	3249131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3212713_3212808_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.13	chr17	+	5481	22	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-24	60036	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	40.3432550904425	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGGTTGCAAGTCCT	9415	False	NA	16	True	AATAAA	-10	NA	3165222	3309170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.14	chr17	+	4955	23	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-17	59438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.9776670762725	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGGCTGTGGCTTCA	9422	False	NA	98	True	NA	NA	NA	3165229	3308572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3281509_3281592_3308012
ES.14175.15	chr17	+	5917	19	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	106	junction_1	21.7574309712598	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTCTAGGAATTGT	9427	False	NA	9	True	AATAAA	-16	NA	3165234	3249132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.16	chr17	+	5412	22	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-10	94136	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	47.9254428520213	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGAGACATCACATC	9429	False	NA	NA	False	NA	NA	NA	3165236	3343270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3341824_3341913_3342193
ES.14175.18	chr17	+	5398	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-7	60039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	38.5530802919819	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGCAAGTCCTTTC	9432	False	NA	19	True	AATAAA	-13	NA	3165239	3309173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308019
ES.14175.2	chr17	+	5012	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-37	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	52.4530980972526	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGAATTGTATTTTTT	9402	False	NA	16	True	AATAAA	-23	NA	3165209	3249139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3212713_3212808_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.20	chr17	+	4520	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	15336	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	44.6379603028633	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTAGTTTTGAATGGA	9434	False	NA	NA	False	ATTAAA	-22	NA	3165241	3264470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3264189
ES.14175.21	chr17	+	5024	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.2435528775087	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTCTAGGAATTGT	9434	False	NA	9	True	AATAAA	-16	NA	3165241	3249132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3212481_3212630_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.26	chr17	+	5063	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.3293475438013	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	9434	False	NA	65	True	NA	NA	NA	3165241	3308539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3196454_3196746_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.27	chr17	+	4961	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	48.3274249262259	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTGTTCTAGGAATT	9434	False	NA	7	True	AATAAA	-14	NA	3165241	3249130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247009
ES.14175.29	chr17	+	4863	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59440	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_8	45.9817078882186	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTGTGGCTTCAGC	9434	False	NA	100	True	NA	NA	NA	3165241	3308574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.3	chr17	+	4912	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-44	-2	-37	2	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTAGGAATTGTATTT	9402	False	NA	13	True	AATAAA	-20	NA	3165209	3249136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.31	chr17	+	4632	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	38.3711805916889	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACAGTGTTCTAGGAA	9434	False	NA	5	True	AATAAA	-12	NA	3165241	3249128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248031_3248270
ES.14175.32	chr17	+	4891	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59433	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	47.9750974707114	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCTGGCTGTGG	9434	False	NA	93	True	NA	NA	NA	3165241	3308567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3212713_3212808_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.33	chr17	+	5299	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-5	59948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	53.5028971178197	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCCCTTGGAATG	9434	False	NA	-72	True	ATTAAA	-17	NA	3165241	3309082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227489_3227880_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248495_3308012
ES.14175.34	chr17	+	4140	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	38.5530802919819	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACAGTGTTCTAGGAA	9436	False	NA	5	True	AATAAA	-12	NA	3165243	3249128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3247541_3248270
ES.14175.36	chr17	+	5487	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-3	60038	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	47.9750974707114	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	9443	False	NA	18	True	AATAAA	-12	NA	3165250	3309172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3212713_3212808_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.39	chr17	+	4722	19	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	40.2688879078295	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGGAATTGTATTTTT	9465	False	NA	15	True	AATAAA	-22	NA	3165272	3249138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227882_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.4	chr17	+	5072	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	-43	-163	-36	163	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTATGTAGTATCTATG	9403	False	NA	NA	False	TATAAA	-19	NA	3165210	3249297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.41	chr17	+	10916	18	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	116	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	49.0095675992247	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTCTAGGAATTGT	9562	False	NA	9	True	AATAAA	-16	NA	3165369	3249132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3239071_3239326_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.44	chr17	+	4337	22	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-33	15340	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	51.5609847403275	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTTGAATGGAGTGG	9683	False	NA	NA	False	ATTAAA	-26	NA	3165490	3264474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3264189
ES.14175.45	chr17	+	4834	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-18	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	56.4065599021958	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9698	False	NA	8	True	AATAAA	-15	NA	3165505	3249131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3196526_3196746_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221500_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.47	chr17	+	4710	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4192605225366	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9712	False	NA	8	True	AATAAA	-15	NA	3165519	3249131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3176958_3177072_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.49	chr17	+	4876	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5762030216443	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9717	False	NA	11	True	AATAAA	-18	NA	3165524	3249134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3196464_3196746_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.50	chr17	+	3255	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	2	59407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.4413879696387	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9718	False	NA	67	True	NA	NA	NA	3165525	3308541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227364_3227500_3227884_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3248270_3248499_3308012
ES.14175.51	chr17	+	7620	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.534199227849	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	9719	False	NA	8	True	AATAAA	-15	NA	3165526	3249131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3212630_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.52	chr17	+	5199	22	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	3	60038	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	47.5323496477772	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	9719	False	NA	18	True	AATAAA	-12	NA	3165526	3309172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3281509_3281592_3308012
ES.14175.53	chr17	+	4159	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	273	434	3	-434	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAATGTTGCCCCAGAT	9719	False	NA	NA	False	NA	NA	NA	3165526	3248700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.57	chr17	+	5427	23	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	16	60038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	53.5166808011011	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	9732	False	NA	18	True	AATAAA	-12	NA	3165539	3309172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3264189_3264451_3308012
ES.14175.58	chr17	+	4996	24	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	143	110313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	61.2704809320801	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAAGGCCTTTCAATTGT	9859	False	NA	NA	False	ATTAAA	-31	NA	3165666	3359447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3341824_3341913_3342193_3342298_3358519
ES.14175.59	chr17	+	4260	18	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	29842	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55.2337592970999	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGTTCTAGGAATTG	6721	False	NA	8	True	AATAAA	-15	NA	3195365	3249131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3195434_3198810_3198869_3213231_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.60	chr17	+	6646	16	ISM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	45469	0	45199	0	3prime_fragment	FALSE	canonical	3	127	junction_1	20.4152448484514	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	214	False	NA	11	True	AATAAA	-18	NA	3210722	3249134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.61	chr17	+	4059	17	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	47708	59436	combination_of_known_splicesites	FALSE	canonical	3	64	junction_16	29.0363457583767	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGCCTGGCTGTGGCTT	2723	False	NA	96	True	NA	NA	NA	3213231	3308570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.62	chr17	+	4375	15	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	52711	60036	combination_of_known_splicesites	FALSE	canonical	3	64	junction_14	30.4598263358175	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGGTTGCAAGTCCT	7726	False	NA	16	True	AATAAA	-10	NA	3218234	3309170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.63	chr17	+	5401	13	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	52804	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	47.8286147498429	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGTGTTCTAGGAAT	7819	False	NA	6	True	AATAAA	-13	NA	3218327	3249129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242439_3242610_3243358_3246052
ES.14175.64	chr17	+	2440	1	Intergenic	novelGene_11855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGAACGGAGGTGACACT	NA	False	NA	NA	False	AAAAAG	-15	NA	3221868	3224308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3221900_3224300
ES.14175.66	chr17	+	3033	8	ISM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	70084	4	69814	-4	3prime_fragment	FALSE	canonical	3	141	junction_5	11.672398980466	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTGTTCTAGGAATT	NA	False	NA	7	True	AATAAA	-14	NA	3235337	3249130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.67	chr17	+	2926	9	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	69814	59407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	54.4925453617281	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	67	True	NA	NA	NA	3235337	3308541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248495_3308012
ES.14175.68	chr17	+	2821	6	ISM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	72608	2	72338	-2	3prime_fragment	FALSE	canonical	3	141	junction_3	10.4880884817015	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTTCTAGGAATTGT	NA	False	NA	9	True	AATAAA	-16	NA	3237861	3249132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14175.69	chr17	+	2467	7	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	72338	15335	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	57.8179614537443	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTAGTTTTGAATGG	NA	False	NA	NA	False	ATTAAA	-21	NA	3237861	3264469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3264189
ES.14175.7	chr17	+	4836	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-36	59441	combination_of_known_splicesites	FALSE	canonical	3	64	junction_20	27.9703414351702	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTGGCTTCAGCC	9403	False	NA	101	True	NA	NA	NA	3165210	3308575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
ES.14175.70	chr17	+	5609	3	NIC	ENSMUSG00000116858.2	novel	1354	3	NA	NA	-559	-12079	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCAGTTTTGCTGCTT	7977	False	NA	NA	False	AAAAAG	-35	NA	3247825	3347041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3248499_3341824_3341913_3342193
ES.14175.71	chr17	+	3266	1	Intergenic	novelGene_11857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGTGTCTGACTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	3255419	3258685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3255400_3258700
ES.14175.72	chr17	+	3814	1	NIC	ENSMUSG00000116858.2	novel	1354	3	NA	NA	1193	-25492	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3279864	3283678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3279900_3283700
ES.14175.73	chr17	+	2131	6	NNC	ENSMUSG00000116858.2	novel	3114	4	NA	NA	-699	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGGTTGCAAGTCCTT	NA	False	NA	17	True	AATAAA	-11	NA	3280846	3309171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_3280936_3281509_3281592_3284889_3285105_3287159_3287482_3290145_3290410_3308012
ES.14175.74	chr17	+	3999	1	Genic_Genomic	ENSMUSG00000116858.2	novel	NA	NA	NA	NA	23628	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGCAAGTCCTTT	NA	False	NA	18	True	AATAAA	-12	NA	3305173	3309172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_3305200_3309200
ES.14175.75	chr17	+	2129	1	NIC	ENSMUSG00000116858.2	novel	1354	3	NA	NA	24899	-597	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTGTGGCTTCAG	NA	False	NA	99	True	NA	NA	NA	3306444	3308573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3306400_3308600
ES.14175.76	chr17	+	178	1	Intergenic	novelGene_11859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTTGTTTTT	1016	False	NA	NA	False	NA	NA	NA	3327696	3327874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3327700_3327900
ES.14175.77	chr17	+	3073	3	ISM	ENSMUSG00000116858.2	ENSMUST00000232042.2	3114	4	60280	-6	60280	6	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAATATGGTCAATTAC	NA	False	NA	NA	False	AATAAA	-26	NA	3341825	3361401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_3341913_3342193_3342298_3358519
ES.14175.9	chr17	+	4976	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	-36	5	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	37.9476942646059	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGAATTGTATTTTTT	9403	False	NA	16	True	AATAAA	-23	NA	3165210	3249139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ES.14176.1	chr17	-	4952	1	Intergenic	novelGene_11854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTATTTTTCAAGTAT	NA	False	NA	NA	False	NA	NA	NA	3188947	3183995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3184000_3188900
ES.14177.1	chr17	-	177	1	Antisense	novelGene_ENSMUSG00000046201.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	3201233	3201056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_3201100_3201200
ES.14178.1	chr17	-	2386	1	Intergenic	novelGene_11856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGCAAAGAAATGAAACTT	NA	False	NA	NA	False	NA	NA	NA	3252245	3249859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3249900_3252200
ES.14179.1	chr17	-	2691	1	Intergenic	novelGene_11858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACACTCCAGGGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	3292787	3290096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3290100_3292800
ES.1418.1	chr1	-	2818	5	NNC	ENSMUSG00000026424.9	novel	2269	2	NA	NA	-24767	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGTGCCCACAGAACT	9022	False	NA	0	True	AATAAA	-12	NA	135120186	135087989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135089434_135094612_135095623_135100057_135100159_135100511_135100599_135120010
ES.1418.2	chr1	-	158	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	135116520	135116362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135116400_135116500
ES.1418.3	chr1	-	153	2	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAAATAAATAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	135139616	135116364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135116472_135139570
ES.1418.4	chr1	-	204	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATAGGCTGGGCATGTT	NA	False	NA	NA	False	NA	NA	NA	135139621	135139417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135139400_135139600
ES.14180.1	chr17	-	161	1	Intergenic	novelGene_11860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3348971	3348810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3348800_3349000
ES.14181.1	chr17	-	130	1	Intergenic	novelGene_11861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	3484275	3484145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3484100_3484300
ES.14182.1	chr17	+	5572	1	Antisense	novelGene_ENSMUSG00000036983.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAACACACCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	3586420	3591992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_3586400_3592000
ES.14183.1	chr17	-	6370	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	26	-4994	-1	4994	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGGTGTTTGTCATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	3608030	3564536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ES.14183.2	chr17	-	3167	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	9	-1774	9	1774	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTGGAATTTATAATCA	NA	False	NA	NA	False	NA	NA	NA	3608047	3567756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ES.14183.3	chr17	-	3077	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	-8	-1667	-8	1667	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTGGAAATACTATACC	NA	False	NA	NA	False	AATAAA	-27	NA	3608064	3567863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ES.14183.4	chr17	-	1676	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	26	-300	-1	300	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAATCATTTGATTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	3608030	3569230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ES.14183.5	chr17	-	1427	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	-8	-17	-8	17	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATGCCCAAAGGAC	NA	False	NA	NA	False	AATAAA	-33	NA	3608064	3569513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ES.14183.6	chr17	-	5317	3	NNC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	25345	6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	40	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAACAGCTCAAAGAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	3582664	3569524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3570071_3571919_3572048_3578021
ES.14183.7	chr17	-	4938	3	NNC	ENSMUSG00000036983.8	novel	1402	7	NA	NA	31489	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTAACAGCTCAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	3576520	3569528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_3570071_3571919_3572115_3572319
ES.14183.8	chr17	-	183	1	Intergenic	novelGene_11862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACTGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	3572301	3572118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_3572100_3572300
ES.14183.9	chr17	-	2415	3	NIC	ENSMUSG00000036983.8	novel	2419	3	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	43	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTTGTTTCATCCA	NA	False	NA	NA	False	NA	NA	NA	3608036	3600531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_3602614_3605206_3605359_3607855
ES.14184.1	chr17	+	2684	1	Intergenic	novelGene_11863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACATAATAGCCTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	3935211	3937895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_3935200_3937900
ES.14185.1	chr17	+	179	1	Intergenic	novelGene_11864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTGGAATGATATT	NA	False	NA	NA	False	NA	NA	NA	4102407	4102586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_4102400_4102600
ES.14186.1	chr17	-	164	1	Intergenic	novelGene_11865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCGAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4227294	4227130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_4227100_4227300
ES.14187.1	chr17	-	144	1	Intergenic	novelGene_11866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAATTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	4692909	4692765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_4692800_4692900
ES.14188.1	chr17	+	1036	3	Intergenic	novelGene_11867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGAATCACTATAGTA	NA	False	NA	NA	False	ATTAAA	-13	NA	4958577	4963737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_4959075_4961921_4962148_4963424
ES.14188.2	chr17	+	2986	1	Intergenic	novelGene_11868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAATCACTATAGTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	4960752	4963738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_4960800_4963700
ES.14189.1	chr17	+	5776	20	NNC	ENSMUSG00000069729.15	novel	1083	3	NA	NA	-190	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1244426886285	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGTATAAGTACATC	NA	False	NA	NA	False	ATTAAA	-38	NA	5044416	5393547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5044671_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.10	chr17	+	7724	19	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-557	1499	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	15.6781872534919	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGATTCTGTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	5046138	5395279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5046768_5090854_5091050_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.11	chr17	+	6780	20	NNC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-528	876	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.5444084670183	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5046167	5394656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046317_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.12	chr17	+	7198	19	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-519	1011	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	15.6781872534919	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGCACTGTGATGGGTGT	NA	False	NA	6	True	AATAAA	-17	NA	5046176	5394791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5046768_5090854_5091050_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.13	chr17	+	6122	20	NNC	ENSMUSG00000069729.15	novel	7309	20	NA	NA	-518	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.0017108475927	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTAATATTTGCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	5046177	5393528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177329_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.14	chr17	+	5942	21	NNC	ENSMUSG00000069729.15	novel	7309	20	NA	NA	-518	-242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7657388742638	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTCTGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-29	NA	5046177	5393538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046402_5046562_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.15	chr17	+	7250	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	965	-906	-517	906	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTAAATTCCTCCTT	NA	False	NA	-99	True	NA	NA	NA	5046178	5394686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.16	chr17	+	1978	5	NNC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	-514	7111	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	24.4374200765956	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTAGTTTCTTATGA	NA	False	NA	NA	False	AATAAA	-15	NA	5046181	5185026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5184099
ES.14189.18	chr17	+	6901	20	NNC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-506	1019	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.5444084670183	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGGGTGTTCTTGAAT	NA	False	NA	14	True	AATAAA	-25	NA	5046189	5394799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046317_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.2	chr17	+	6874	20	NNC	ENSMUSG00000069729.15	novel	1083	3	NA	NA	-32	1023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1244426886285	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGTTCTTGAATGCTG	NA	False	NA	18	True	AATAAA	-29	NA	5044574	5394803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5044671_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.20	chr17	+	3464	8	ISM	ENSMUSG00000069729.15	ENSMUST00000092723.11	7150	19	997	50622	-485	-50622	5prime_fragment	FALSE	canonical	3	53	junction_5	7.02764221499934	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGCACCTGTGTGT	NA	False	NA	NA	False	CATAAA	-19	NA	5046210	5343158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230
ES.14189.21	chr17	+	6042	20	NNC	ENSMUSG00000069729.15	novel	7309	20	NA	NA	-464	-246	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	16.2717572223314	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATTTGCTGTCTGTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	5046231	5393534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377926_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.22	chr17	+	6991	19	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	-438	906	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.5682970639842	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTAAATTCCTCCTT	NA	False	NA	-99	True	NA	NA	NA	5046257	5394686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.23	chr17	+	5502	19	NNC	ENSMUSG00000069729.15	novel	418	3	NA	NA	12852	-246	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	17.1630704611477	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATTTGCTGTCTGTGT	459	False	NA	NA	False	ATTAAA	-25	NA	5103704	5393534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5103893_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.24	chr17	+	5077	1	Intergenic	novelGene_11871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGGAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	5178728	5183805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_5178700_5183800
ES.14189.25	chr17	+	3415	1	Intergenic	novelGene_11874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	AATACA	-25	NA	5255775	5259190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_5255800_5259200
ES.14189.26	chr17	+	5951	15	NNC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	238401	898	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.4143855773738	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACTTGATGTAAAT	4291	False	NA	NA	False	NA	NA	NA	5329253	5394678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5329351_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.27	chr17	+	4444	3	NNC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	238428	-48354	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTGTATATATGTTC	4318	False	NA	NA	False	AATAAA	-45	NA	5329280	5345426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5329349_5329477_5329658_5341230
ES.14189.29	chr17	+	4498	13	NNC	ENSMUSG00000069729.15	novel	7150	19	NA	NA	255314	-242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8890920498395	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTCTGTGTGTAT	2191	False	NA	NA	False	ATTAAA	-29	NA	5346166	5393538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5346459_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.30	chr17	+	5208	5	ISM	ENSMUSG00000069729.15	ENSMUST00000092723.11	7150	19	336549	-903	290910	903	3prime_fragment	FALSE	canonical	3	55	junction_3	9.90896059130321	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGATGTAAATTCCTC	NA	False	NA	NA	False	NA	NA	NA	5381762	5394683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.31	chr17	+	3687	1	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	300147	906	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTAAATTCCTCCTT	NA	False	NA	-99	True	NA	NA	NA	5390999	5394686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5391000_5394700
ES.14189.4	chr17	+	6746	20	NNC	ENSMUSG00000069729.15	novel	1083	3	NA	NA	-21	906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1244426886285	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTAAATTCCTCCTT	NA	False	NA	-99	True	NA	NA	NA	5044585	5394686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5044671_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.5	chr17	+	7302	20	NNC	ENSMUSG00000069729.15	novel	1083	3	NA	NA	-4	1479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1244426886285	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTGTGTATAGTGCCAA	NA	False	NA	NA	False	NA	NA	NA	5044602	5395259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5044671_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.6	chr17	+	8633	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	-300	-1024	-300	1024	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTCTTGAATGCTGT	NA	False	NA	19	True	AATAAA	-30	NA	5044913	5394804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.8	chr17	+	6632	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	435	242	300	-242	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTCTGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-29	NA	5045648	5393538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.14189.9	chr17	+	7481	19	NIC	ENSMUSG00000069729.15	novel	11325	20	NA	NA	530	1017	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.5682970639842	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGATGGGTGTTCTTGA	NA	False	NA	12	True	AATAAA	-23	NA	5045878	5394797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ES.1419.1	chr1	-	160	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTCTT	8182	False	NA	NA	False	NA	NA	NA	135147148	135146988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135147000_135147100
ES.14190.1	chr17	-	4772	1	Intergenic	novelGene_11869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAATAGGCCAATAGGC	2915	False	NA	NA	False	NA	NA	NA	5055580	5050808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5050800_5055600
ES.14190.2	chr17	-	4608	2	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAATAGGCCAATAGGC	2915	False	NA	NA	False	NA	NA	NA	5055580	5050808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5052876_5053039
ES.14191.1	chr17	-	2949	2	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGCTACCTGAAATC	NA	False	NA	NA	False	ATTAAA	-13	NA	5103612	5097634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5100466_5103494
ES.14191.2	chr17	-	3058	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGCTACCTGAAATC	NA	False	NA	NA	False	ATTAAA	-13	NA	5103595	5097634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5100466_5102907_5103034_5103494
ES.14191.3	chr17	-	1934	2	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTACAGTCTGTTTAC	NA	False	NA	-2	True	GATAAA	-14	NA	5103618	5099242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5100466_5102907
ES.14192.1	chr17	-	4696	1	Intergenic	novelGene_11870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAATCACAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	5158183	5153487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5153500_5158200
ES.14193.1	chr17	-	1382	1	Intergenic	novelGene_11872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5186593	5185211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5185200_5186600
ES.14194.1	chr17	-	175	1	Intergenic	novelGene_11873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGGTGCT	5027	False	NA	NA	False	NA	NA	NA	5212267	5212092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5212100_5212300
ES.14195.1	chr17	-	156	1	Intergenic	novelGene_11875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	5266275	5266119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5266100_5266300
ES.14196.1	chr17	-	220	1	Intergenic	novelGene_11876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGCACTTGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	5326941	5326721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5326700_5326900
ES.14197.1	chr17	-	5532	3	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCGTACTCATTTAGAC	NA	False	NA	NA	False	AATAAA	-11	NA	5353751	5342164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5346573_5351435_5351929_5353120
ES.14198.1	chr17	-	3588	1	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGATGACAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	5357686	5354098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5354100_5357700
ES.14199.1	chr17	-	962	1	Antisense	novelGene_ENSMUSG00000069729.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	5395177	5394215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5394200_5395200
ES.142.1	chr1	+	177	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAGA	2111	False	NA	NA	False	NA	NA	NA	16108481	16108658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16108500_16108700
ES.1420.1	chr1	+	175	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1181	False	NA	NA	False	NA	NA	NA	135156752	135156927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135156800_135156900
ES.14200.1	chr17	-	175	1	Intergenic	novelGene_11877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAAGCAGGTGACTGTC	NA	False	NA	NA	False	AATAAA	-10	NA	5456062	5455887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5455900_5456100
ES.14201.1	chr17	-	1556	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	7	-615	7	615	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTACATTTCAATTA	3475	False	NA	NA	False	AGTAAA	-43	NA	5490511	5460529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ES.14201.10	chr17	-	675	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	-9	114	-6	-114	multi-exon	FALSE	canonical	3	677	junction_2	16.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTAATGTGTTAGAT	3446	False	NA	NA	False	AATAAA	-20	NA	5490540	5483413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_5483855_5489806_5489908_5490407
ES.14201.11	chr17	-	6562	2	NIC	ENSMUSG00000004945.16	novel	780	3	NA	NA	-1	-171	intron_retention	FALSE	canonical	3	677	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTATATTGCTTGAC	3454	False	NA	NA	False	AATAAA	-17	NA	5490532	5483470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_5489908_5490407
ES.14201.2	chr17	-	971	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	-17	-6	-1	6	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTGTGTGTCTGTGTGTG	3451	False	NA	-2	True	NA	NA	NA	5490535	5461138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ES.14201.3	chr17	-	1252	5	NNC	ENSMUSG00000004945.16	novel	948	4	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.696553198903	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCGTGTGTGTCTGTGTG	3475	False	NA	-4	True	NA	NA	NA	5490511	5461140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_5461743_5463622_5463930_5483716_5483855_5489806_5489908_5490407
ES.14201.4	chr17	-	4453	3	NNC	ENSMUSG00000004945.16	novel	948	4	NA	NA	22960	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGCGTGTGTGTCTG	NA	False	NA	-8	True	NA	NA	NA	5467558	5461144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_5461743_5463622_5463780_5463860
ES.14201.5	chr17	-	1504	1	NIC	ENSMUSG00000004945.16	novel	948	4	NA	NA	27870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGCGTGTGTGTCTG	NA	False	NA	-8	True	NA	NA	NA	5462648	5461144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_5461100_5462600
ES.14201.8	chr17	-	705	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	10	233	10	-233	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGTCGGGGGGGGGGG	3478	False	NA	NA	False	AATAAA	-16	NA	5490508	5461377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ES.14201.9	chr17	-	813	4	NNC	ENSMUSG00000004945.16	novel	780	3	NA	NA	5	-9678	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	323.428508329121	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATTGTCATTTTTCAC	3473	False	NA	NA	False	AATAAA	-32	NA	5490513	5470822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_5471291_5483716_5483855_5489806_5489908_5490407
ES.14202.1	chr17	+	3022	9	NNC	ENSMUSG00000034265.9	novel	3078	9	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.789311015167	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTTGTCAACAGCTT	2724	False	NA	28	True	AATAAA	-29	NA	5542840	5804084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5803011
ES.14202.2	chr17	+	2934	10	NNC	ENSMUSG00000034265.9	novel	3078	9	NA	NA	34	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.20035841257942	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGCATGTAGTTAC	2749	False	NA	40	True	AATAAA	-41	NA	5542865	5804096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5543967_5698177_5698339_5735929_5736089_5758017_5758055_5762662_5762689_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5803011
ES.14202.3	chr17	+	3113	10	NNC	ENSMUSG00000034265.9	novel	3078	9	NA	NA	41	5632	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.51114903288161	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCTTTGAAAAAAA	2756	False	NA	NA	False	AATAAA	-23	NA	5542872	5809718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5808312_5808399_5808608
ES.14202.4	chr17	+	2129	2	Intergenic	novelGene_11878	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5789161	5791330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_5789589_5789628
ES.14203.1	chr17	-	1876	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGTGGTGTTGTGTCTT	NA	False	NA	0	True	NA	NA	NA	5577503	5572999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5574721_5577348
ES.14204.1	chr17	-	3043	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5784389	5776809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5777207_5781743
ES.14205.1	chr17	+	178	1	Intergenic	novelGene_11879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7623	False	NA	NA	False	NA	NA	NA	5812281	5812459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_5812300_5812500
ES.14206.1	chr17	-	1319	2	Intergenic	novelGene_11880	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5862545	5860996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_5861376_5861605
ES.14207.1	chr17	-	654	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-61	-152	-61	152	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	5866976	5866322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_5866300_5867000
ES.14207.2	chr17	-	575	2	Genic_Genomic	ENSMUSG00000068120.5	novel	441	1	NA	NA	-60	143	multi-exon	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAGATGAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	5866975	5866331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_5866877_5866945
ES.14208.1	chr17	+	3769	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-431	-7	-431	7	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCCAAAGTATGTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	5891172	5982236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.10	chr17	+	4669	16	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	0	-918	intron_retention	FALSE	non_canonical	0	0	junction_3	62.8834548103783	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATAACTCTTTCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5891626	5981311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5949593_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.11	chr17	+	3594	19	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	74.6714821529182	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	5891627	5982230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5891822_5920942_5921229_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.12	chr17	+	3308	18	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.7811321115463	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	5891633	5982230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968792_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.13	chr17	+	3838	17	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	8	-918	intron_retention	FALSE	canonical	3	159	junction_6	26.8536979529822	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATAACTCTTTCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5891634	5981311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.14	chr17	+	3649	18	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.7916061406723	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	5891636	5982230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5971299_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.16	chr17	+	2366	18	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	15	-920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	60.8399681961111	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTATAACTCTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	5891641	5981309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978486_5978572_5980844
ES.14208.17	chr17	+	3273	18	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.5512737058837	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGTACAGCAGATTC	NA	False	NA	NA	False	AATAAA	-9	NA	5891647	5982221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976352_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.18	chr17	+	5036	12	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	28	-6627	intron_retention	FALSE	canonical	3	159	junction_6	28.5671602478808	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5891654	5975602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970949_5972404
ES.14208.19	chr17	+	2632	19	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	40	-922	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	74.6714821529182	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTTTATAACTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	5891666	5981307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5891822_5920942_5921229_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.20	chr17	+	1399	1	Intergenic	novelGene_11881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTATAACCTGGTCTTG	3485	False	NA	NA	False	NA	NA	NA	5901588	5902987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_5901600_5903000
ES.14208.21	chr17	+	6343	9	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	68221	0	intron_retention	FALSE	canonical	0	0	junction_1	77.561971190784	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	5959847	5982229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5960792_5966887_5968786_5970345_5970450_5970844_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.22	chr17	+	1479	2	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	86874	0	86851	0	3prime_fragment	FALSE	canonical	3	219	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	2501	False	NA	NA	False	AATAAA	-17	NA	5978477	5982229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_5978572_5980844
ES.14208.3	chr17	+	2611	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-287	-921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.1258596888926	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTATAACTCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5891316	5981308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844_5981160_5981245
ES.14208.4	chr17	+	2637	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	-218	912	-218	-912	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTCTTTCAGTCCTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	5891385	5981317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.5	chr17	+	3651	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-215	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	75.5438103616082	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGATTCCCAAAGTATG	NA	False	NA	NA	False	AATAAA	-19	NA	5891388	5982231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5971200_5971304_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.6	chr17	+	716	1	Genic_Genomic	ENSMUSG00000002365.11	novel	NA	NA	NA	NA	-28	-48114	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGTGCTTTTAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	5891575	5892291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_5891600_5892300
ES.14208.7	chr17	+	3456	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	77.1643268183772	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	5891575	5982229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5971206_5971304_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14208.8	chr17	+	3371	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	77.7395143975407	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	5891598	5982229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978576_5978774_5978806_5980844
ES.14208.9	chr17	+	5732	17	NIC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	-3	1	intron_retention	FALSE	canonical	3	159	junction_6	26.0976980546178	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAGATTCCCAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	5891600	5982230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ES.14209.1	chr17	-	7066	1	Antisense	novelGene_ENSMUSG00000096962.2_AS_novelGene_ENSMUSG00000002365.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5893498	5886432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5886400_5893500
ES.14209.2	chr17	-	2099	1	Antisense	novelGene_ENSMUSG00000002365.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTTGATATTTAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	5892898	5890799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5890800_5892900
ES.14209.3	chr17	-	1843	3	Antisense	novelGene_ENSMUSG00000002365.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTTGATATTTAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	5898606	5890799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5892485_5897018_5897074_5898503
ES.14209.4	chr17	-	4888	2	Antisense	novelGene_ENSMUSG00000002365.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACAGTCATTTCCCT	NA	False	NA	NA	False	NA	NA	NA	5898625	5892307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_5897074_5898503
ES.1421.1	chr1	+	1422	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	-3	-188	-3	188	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTATTACCTGGG	4158	False	NA	NA	False	AATAAA	-25	NA	135159729	135161151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135159700_135161200
ES.1421.2	chr1	+	1239	2	Genic_Genomic	ENSMUSG00000079139.5	novel	1231	1	NA	NA	3	180	multi-exon	FALSE	canonical	3	144	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTATTCTTAT	4164	False	NA	NA	False	AATAAA	-17	NA	135159735	135161143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_135160090_135160258
ES.1421.3	chr1	+	531	2	Genic_Genomic	ENSMUSG00000079139.5	novel	1231	1	NA	NA	53	-478	multi-exon	FALSE	canonical	3	144	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGCCAGCCTATGAG	4214	False	NA	NA	False	ATTAAA	-13	NA	135159785	135160485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_135160090_135160258
ES.14210.1	chr17	+	1903	12	ISM	ENSMUSG00000023805.18	ENSMUST00000080283.13	4793	26	-36	24754	-11	3311	5prime_fragment	FALSE	canonical	1	1	junction_1	6.19784019965793	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGTCATTTGTCA	1493	False	NA	NA	False	NA	NA	NA	5991641	6064076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_5991853_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782
ES.14210.10	chr17	+	3861	26	NNC	ENSMUSG00000023805.18	novel	4072	26	NA	NA	-21	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	5.32165387826003	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGATGCCCAGTAAGT	NA	False	NA	NA	False	AAAACA	-45	NA	6025839	6094598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025885_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6094228
ES.14210.11	chr17	+	4589	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-1	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.76655011512519	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTGTGTGTGCCAT	NA	False	NA	NA	False	TTTAAA	-10	NA	6025859	6088727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025934_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.12	chr17	+	4723	26	FSM	ENSMUSG00000023805.18	ENSMUST00000115790.8	4808	26	-144	229	10	-2	multi-exon	FALSE	canonical	2	2	junction_21	4.96322475815875	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGTCTTAAGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	6025870	6088601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6079974_6080110_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.13	chr17	+	4660	25	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	9	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	4.85036510653236	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGCCATTTGCTT	NA	False	NA	NA	False	TTTAAA	-16	NA	6025924	6088733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084095_6084199_6085685_6085835_6087658
ES.14210.14	chr17	+	5456	25	NIC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	9	-82	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	4.82974004361403	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTTTCTTGGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	6025924	6089534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058375_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.15	chr17	+	4668	25	NIC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	4.82974004361403	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTTCTGACCCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	6026009	6088831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058375_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.16	chr17	+	4725	27	NNC	ENSMUSG00000023805.18	novel	5664	27	NA	NA	88	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.90419066897583	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATTTGCTTGTTCGTTT	NA	False	NA	NA	False	TTTAAA	-24	NA	6026102	6088741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6052156_6052251_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6079974_6080110_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.17	chr17	+	4489	25	NNC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	1601	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.73168985552613	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGCCATTTGC	NA	False	NA	NA	False	TTTAAA	-14	NA	6027615	6088731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6027673_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.18	chr17	+	3765	25	NNC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	1601	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	5.50504818830458	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGACTCCCTGTGT	NA	False	NA	NA	False	AATAAA	-27	NA	6027615	6094577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6027673_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6094228
ES.14210.19	chr17	+	4664	25	NNC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	-3033	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.46945431972473	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTTCTGACCCACTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	6035227	6088832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6035370_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058375_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.2	chr17	+	3471	23	ISM	ENSMUSG00000023805.18	ENSMUST00000080283.13	4793	26	-2	5640	-2	-14	5prime_fragment	FALSE	canonical	1	1	junction_1	4.78396944350229	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTCTCCTTCCTCTC	1527	False	NA	NA	False	AATATA	-2	NA	5991675	6083190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_5991853_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971
ES.14210.20	chr17	+	5890	24	NNC	ENSMUSG00000023805.18	novel	3498	23	NA	NA	-489	744	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.78616468592088	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGCTTACTGTGGAT	NA	False	NA	NA	False	AATAAA	-20	NA	6037771	6090409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6037823_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.21	chr17	+	4454	16	NNC	ENSMUSG00000023805.18	novel	3778	20	NA	NA	2753	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.10636362518253	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTGTGTGTGCCAT	NA	False	NA	NA	False	TTTAAA	-10	NA	6061061	6088727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6073831_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.22	chr17	+	2374	12	ISM	ENSMUSG00000023805.18	ENSMUST00000115785.8	3778	20	11819	152	-5660	-74	3prime_fragment	FALSE	canonical	2	9	junction_10	2.20817414572566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTAGTGTATGAGA	NA	False	NA	NA	False	AAAAAG	-28	NA	6069690	6088529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.23	chr17	+	813	5	ISM	ENSMUSG00000023805.18	ENSMUST00000126881.2	1260	10	-5	8729	-5	2443	5prime_fragment	FALSE	canonical	2	12	junction_1	2.04633819296811	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTGTGTAGAGTGAAT	NA	False	NA	NA	False	AAGAAA	-5	NA	6075345	6079008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693
ES.14210.3	chr17	+	5768	25	ISM	ENSMUSG00000023805.18	ENSMUST00000080283.13	4793	26	33857	-615	-326	2	3prime_fragment	FALSE	canonical	2	9	junction_23	3.86198531270583	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCCCATCATGGCTGAC	NA	False	NA	NA	False	TATAAA	-23	NA	6025534	6089445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.4	chr17	+	4763	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-302	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.53889854480137	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGCTGTTCTGACCCA	NA	False	NA	NA	False	ATTAAA	-15	NA	6025558	6088828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025706_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.5	chr17	+	5581	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-282	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.53889854480137	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAAGCATGTATCACAT	NA	False	NA	NA	False	TTTAAA	-25	NA	6025578	6089666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025706_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.6	chr17	+	4915	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-272	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.53889854480137	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTTCTGACCCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	6025588	6088831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025885_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.7	chr17	+	5327	26	NNC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	-253	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.53889854480137	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTGGCCCATCATGGC	NA	False	NA	NA	False	TATAAA	-19	NA	6025607	6089441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6025706_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14210.8	chr17	+	3403	14	ISM	ENSMUSG00000023805.18	ENSMUST00000115790.8	4808	26	-269	18004	-115	-4	5prime_fragment	FALSE	canonical	3	11	junction_2	4.40010758340772	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAAGTAAGTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	6025745	6070826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560
ES.14210.9	chr17	+	4903	25	ISM	ENSMUSG00000023805.18	ENSMUST00000080283.13	4793	26	34107	0	-76	0	3prime_fragment	FALSE	canonical	2	9	junction_23	3.86198531270583	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCTGTTCTGACCCACT	NA	False	NA	NA	False	ATTAAA	-17	NA	6025784	6088830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ES.14211.1	chr17	-	4171	1	Antisense	novelGene_ENSMUSG00000023805.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGATGCGAGACAGCAT	NA	False	NA	NA	False	NA	NA	NA	6046425	6042254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6042300_6046400
ES.14212.1	chr17	-	180	1	Intergenic	novelGene_11882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	6057327	6057147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6057100_6057300
ES.14213.1	chr17	-	176	1	Intergenic	novelGene_11883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGGTATG	5140	False	NA	NA	False	NA	NA	NA	6074586	6074410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6074400_6074600
ES.14214.1	chr17	-	5605	17	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	3	1637	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.0502799018516	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTAACTCTACTTTTT	2596	False	NA	0	True	NA	NA	NA	6130013	6090833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124487_6129893
ES.14214.10	chr17	-	7151	12	NNC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	9142	1624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	33.2123147528092	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	1367	False	NA	-13	True	NA	NA	NA	6120860	6090846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6118672_6119433
ES.14214.11	chr17	-	5487	16	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	0	1624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	27.9534533744143	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2593	False	NA	-13	True	NA	NA	NA	6130016	6090846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116999_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.12	chr17	-	5439	15	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	4	1624	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	23.2892197186175	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2611	False	NA	-13	True	NA	NA	NA	6129998	6090846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6124430_6124523_6129893
ES.14214.13	chr17	-	5579	17	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	-2	1624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	23.4464149711635	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTGTTCAATTCTT	2591	False	NA	-13	True	NA	NA	NA	6130018	6090846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116999_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.14	chr17	-	5555	17	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	9	1621	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	20.1397461503367	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTGGCTTGTTCAATT	2616	False	NA	-16	True	NA	NA	NA	6129993	6090849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.15	chr17	-	3977	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	30	0	-30	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCCCTTACGTTCCTG	2593	False	NA	NA	False	ACTAAA	-15	NA	6130016	6092500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.16	chr17	-	3655	6	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	26869	103	-1484	-103	3prime_fragment	FALSE	canonical	3	72	junction_2	5.65685424949238	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTGATGATAATTTAT	3367	False	NA	NA	False	CATAAA	-19	NA	6103147	6092573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964
ES.14214.17	chr17	-	3620	5	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	27772	105	-581	-105	intron_retention	FALSE	canonical	3	72	junction_2	6.29980158417708	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGCTGATGATAATTT	4270	False	NA	NA	False	CATAAA	-17	NA	6102244	6092575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999
ES.14214.18	chr17	-	3811	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	-13	-1765	1	-105	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGCTGATGATAATTT	2594	False	NA	NA	False	CATAAA	-17	NA	6130015	6092575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.19	chr17	-	3660	15	NIC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	-1	-107	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	24.5594863005507	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATGCTGATGATAAT	2606	False	NA	NA	False	CATAAA	-15	NA	6130003	6092577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6122108_6122146_6124430_6124523_6129893
ES.14214.2	chr17	-	5400	15	NIC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	16	1627	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	27.5596755112558	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTTCAATTCTTAAC	2623	False	NA	-10	True	NA	NA	NA	6129986	6090843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.20	chr17	-	3041	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	14	-824	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAATGGTTCTTTCTTG	2621	False	NA	NA	False	NA	NA	NA	6129988	6093294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.21	chr17	-	3175	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	832	0	-832	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTTAGCACAATGGTT	2593	False	NA	NA	False	NA	NA	NA	6130016	6093302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.22	chr17	-	3124	17	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	0	-833	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	20.1397461503367	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTCTTAGCACAATGGT	2593	False	NA	NA	False	NA	NA	NA	6130016	6093303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.23	chr17	-	4433	14	NNC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	-1	-835	intron_retention	FALSE	canonical	1	6	junction_1	36.4998176213325	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGCTCTTAGCACAATG	2592	False	NA	NA	False	NA	NA	NA	6130017	6093305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095998_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6115223_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.24	chr17	-	3093	17	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	0	-835	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	22.3439029715043	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGCTCTTAGCACAATG	2593	False	NA	NA	False	NA	NA	NA	6130016	6093305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095998_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.25	chr17	-	6647	13	NNC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	7301	-835	intron_retention	FALSE	non_canonical	0	0	junction_12	27.9115666983341	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGCTCTTAGCACAATG	9908	False	NA	NA	False	NA	NA	NA	6122701	6093305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6118672_6119433
ES.14214.26	chr17	-	2144	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	1	1862	1	8	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGTTAAGGTCTCC	2594	False	NA	-11	True	AATATA	-23	NA	6130015	6094332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.27	chr17	-	3482	14	NNC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	16	6	intron_retention	FALSE	canonical	1	1	junction_12	28.6205537101321	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGTTGTTAAGGTCT	2623	False	NA	-13	True	AATATA	-21	NA	6129986	6094334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102057_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6117068_6117803_6117936_6119573_6119664_6124430_6124523_6129893
ES.14214.28	chr17	-	1924	15	NIC	ENSMUSG00000015659.13	novel	2033	16	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	27.5596755112558	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCTGTTGTTAAGGTC	2607	False	NA	-14	True	AATATA	-20	NA	6130002	6094335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.29	chr17	-	2024	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCATCTGTTGTTAAG	2594	False	NA	-17	True	AATATA	-17	NA	6130015	6094338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.3	chr17	-	8519	5	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	24603	-1625	-3750	1625	intron_retention	FALSE	canonical	3	72	junction_2	6.29980158417708	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	1101	False	NA	-12	True	NA	NA	NA	6105413	6090845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999
ES.14214.30	chr17	-	3208	5	ISM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	26405	0	-1934	0	intron_retention	FALSE	canonical	3	72	junction_2	6.29980158417708	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCCATCTGTTGTTA	2917	False	NA	-19	True	AATATA	-15	NA	6103597	6094340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999
ES.14214.31	chr17	-	2066	16	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	18	3317	4	-1447	5prime_fragment	FALSE	canonical	3	56	junction_5	12.8020831638188	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGATTTCACTCTTCA	2611	False	NA	NA	False	AATAAA	-12	NA	6129998	6095787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.32	chr17	-	4258	8	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	-3	3407	intron_retention	FALSE	canonical	3	78	junction_3	11.8545608204141	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCACAATAGAGCTTT	2604	False	NA	NA	False	AGTAAA	-17	NA	6130005	6111816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.33	chr17	-	4057	7	ISM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	-13	17597	1	3286	5prime_fragment	FALSE	canonical	3	21	junction_3	29.3792254644143	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGACTGTGGTGTTTTG	2594	False	NA	NA	False	TATAAA	-19	NA	6130015	6111937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.34	chr17	-	4146	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	1	19468	1	3285	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGACTGTGGTGTTTT	2594	False	NA	NA	False	TATAAA	-18	NA	6130015	6111938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.35	chr17	-	3864	5	NIC	ENSMUSG00000015659.13	novel	627	6	NA	NA	5	3285	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	41.1422836021531	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGACTGTGGTGTTTT	2612	False	NA	NA	False	TATAAA	-18	NA	6129997	6111938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6115353_6116945_6117068_6117803_6117936_6124430_6124523_6129893
ES.14214.36	chr17	-	3955	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	1	19659	1	3094	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGCAGACTTGTTT	2594	False	NA	NA	False	AATAAA	-29	NA	6130015	6112129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.37	chr17	-	1807	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	30	21778	16	975	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGGTGGCATATTTG	2623	False	NA	NA	False	AAGAAA	-13	NA	6129986	6114248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.38	chr17	-	1617	8	ISM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	21998	0	755	5prime_fragment	FALSE	canonical	3	78	junction_3	11.8545608204141	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCAGGTTTTGTTTTCTT	2593	False	NA	NA	False	NA	NA	NA	6130016	6114468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.39	chr17	-	182	1	Intergenic	novelGene_11884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCGGTGAATTGG	5697	False	NA	NA	False	NA	NA	NA	6126912	6126730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6126700_6126900
ES.14214.4	chr17	-	5528	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	0	-3495	0	1625	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2607	False	NA	-12	True	NA	NA	NA	6130002	6090845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.6	chr17	-	5550	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	-32	1625	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2561	False	NA	-12	True	NA	NA	NA	6130048	6090845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14214.7	chr17	-	5630	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	2	-1625	2	1625	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2595	False	NA	-12	True	NA	NA	NA	6130014	6090845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ES.14215.10	chr17	+	3615	5	NNC	ENSMUSG00000034377.11	novel	5223	11	NA	NA	-15	-13762	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.75925291729789	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	6157117	6243427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6242203
ES.14215.11	chr17	+	3155	2	FSM	ENSMUSG00000034377.11	ENSMUST00000146758.8	3147	2	0	-8	0	8	multi-exon	FALSE	canonical	3	19	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCCTTAGAGCGTATT	NA	False	NA	NA	False	AATAAA	-21	NA	6157132	6175118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6157272_6172102
ES.14215.12	chr17	+	3762	12	NIC	ENSMUSG00000034377.11	novel	5223	11	NA	NA	0	-2537	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	8.30114997509929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTGGCAGTTTAAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	6157132	6274579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426
ES.14215.13	chr17	+	3416	1	NIC	ENSMUSG00000034377.11	novel	3147	2	NA	NA	2	-11609	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACATGAAGTACCTTAA	NA	False	NA	NA	False	AATGAA	-36	NA	6157134	6160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6157100_6160600
ES.14215.14	chr17	+	853	3	NNC	ENSMUSG00000034377.11	novel	3147	2	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGAGTTTTCCTTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	6157134	6175111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6157272_6172102_6172624_6174916
ES.14215.15	chr17	+	8821	14	FSM	ENSMUSG00000034377.11	ENSMUST00000149756.8	8784	14	-31	-6	2	6	multi-exon	FALSE	canonical	0	0	junction_1	8.90581885440388	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTGCCAAGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	6157134	6290909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6157272_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ES.14215.16	chr17	+	7496	15	NIC	ENSMUSG00000034377.11	novel	9687	14	NA	NA	4	-3263	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	7.83275435695047	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCAGTTATAAGTGTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	6157136	6287640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ES.14215.17	chr17	+	4539	7	NIC	ENSMUSG00000034377.11	novel	5223	11	NA	NA	16	1839	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	3.77123616632825	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTAAGCAAGAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	6157148	6259028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165
ES.14215.18	chr17	+	11257	16	NIC	ENSMUSG00000034377.11	novel	9687	14	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	8.33626615058165	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTGCCAAGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	6157161	6290909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6157272_6172102_6172620_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ES.14215.19	chr17	+	10866	16	NNC	ENSMUSG00000034377.11	novel	9687	14	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.34523051258412	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACATGTGTGCCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	6157177	6290905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6157272_6187485_6189432_6221440_6221587_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ES.14215.2	chr17	+	592	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	26	1627	-25	-242	multi-exon	FALSE	canonical	3	932	junction_1	74.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGCTGGTGAGATGGC	1716	False	NA	87	True	ATTAAA	-11	NA	6130086	6135165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6130187_6131076_6131150_6134746
ES.14215.20	chr17	+	10890	15	NNC	ENSMUSG00000034377.11	novel	9687	14	NA	NA	-5774	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.45667228420547	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTGCCAAGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	6182648	6290909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6182909_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ES.14215.21	chr17	+	2952	1	NIC	ENSMUSG00000034377.11	novel	8784	14	NA	NA	-8731	31	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAACA	3713	False	NA	NA	False	NA	NA	NA	6274195	6277147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6274200_6277100
ES.14215.22	chr17	+	4366	2	ISM	ENSMUSG00000034377.11	ENSMUST00000039655.3	9687	14	95113	1001	609	-1001	3prime_fragment	FALSE	canonical	3	25	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATCCAAGTGTAGTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	6283535	6289902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6284500_6286500
ES.14215.23	chr17	+	4406	1	NIC	ENSMUSG00000034377.11	novel	8784	14	NA	NA	3571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTACATGTGTGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	6286497	6290903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6286500_6290900
ES.14215.3	chr17	+	2813	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	34	-602	-17	602	multi-exon	FALSE	canonical	3	932	junction_1	74.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGAGATCTCACTTTG	1724	False	NA	NA	False	NA	NA	NA	6130094	6137394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6130187_6131076_6131150_6134746
ES.14215.4	chr17	+	805	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	42	1398	-9	-13	multi-exon	FALSE	canonical	3	932	junction_1	74.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGTTAAATTATCCTT	1732	False	NA	16	True	ATTAAA	-20	NA	6130102	6135394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6130187_6131076_6131150_6134746
ES.14215.5	chr17	+	1152	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	55	1038	4	347	multi-exon	FALSE	canonical	3	932	junction_1	74.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAATGCAGCAAGGT	1745	False	NA	NA	False	TATAAA	-6	NA	6130115	6135754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6130187_6131076_6131150_6134746
ES.14215.6	chr17	+	4884	13	Fusion	ENSMUSG00000034377.11_ENSMUSG00000034345.15	novel	9687	14	NA	NA	18	-1406	multi-exon	FALSE	canonical	0	0	junction_2	253.771496079095	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCATGGAGTCAGGAAT	1759	False	NA	NA	False	AATAAA	-17	NA	6130129	6275710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_6130187_6131076_6131150_6187485_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426
ES.14215.7	chr17	+	1604	2	NIC	ENSMUSG00000034345.15	novel	879	3	NA	NA	-24	-26	intron_retention	FALSE	canonical	3	1081	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATAATGGAGTTTGG	1810	False	NA	3	True	ATTAAA	-7	NA	6130180	6135381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6131150_6134746
ES.14215.8	chr17	+	4033	1	NIC	ENSMUSG00000034345.15	novel	2245	3	NA	NA	870	-300	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTAGCTGCAATTT	2704	False	NA	29	True	ATTAAA	-19	NA	6131074	6135107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6131100_6135100
ES.14215.9	chr17	+	3612	5	NNC	ENSMUSG00000034377.11	novel	5223	11	NA	NA	-28	-13761	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.75925291729789	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	6157104	6243428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6157272_6187485_6189432_6227103_6227233_6235411_6235574_6242220
ES.14216.1	chr17	-	175	2	Antisense	novelGene_ENSMUSG00002075503.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATGTAAG	NA	False	NA	NA	False	NA	NA	NA	6224853	6150452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6150548_6224773
ES.14216.2	chr17	-	161	1	Intergenic	novelGene_11885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	6150628	6150467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6150500_6150600
ES.14216.3	chr17	-	164	1	Intergenic	novelGene_11886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTTTTTTACCAAA	NA	False	NA	NA	False	NA	NA	NA	6162230	6162066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6162100_6162200
ES.14216.4	chr17	-	1909	1	FSM	ENSMUSG00000051639.4	ENSMUST00000061073.2	957	1	-805	-147	-805	147	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6173244	6171335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6171300_6173200
ES.14216.5	chr17	-	1105	2	Genic_Genomic	ENSMUSG00000051639.4	novel	957	1	NA	NA	-58	144	multi-exon	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCATCCTAGCTGCCT	NA	False	NA	NA	False	ATTAAA	-44	NA	6172497	6171338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_6172310_6172363
ES.14216.6	chr17	-	3163	1	FSM	ENSMUSG00000058542.4	ENSMUST00000078419.2	552	1	-2413	-198	-2413	198	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGGACTAAAATAAAAGG	NA	False	NA	NA	False	NA	NA	NA	6185093	6181930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6181900_6185100
ES.14216.7	chr17	-	177	1	Intergenic	novelGene_11887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	6193071	6192894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6192900_6193100
ES.14217.1	chr17	-	2045	1	Antisense	novelGene_ENSMUSG00000034377.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCATACCTATAGGAA	NA	False	NA	NA	False	AATGAA	-42	NA	6272877	6270832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6270800_6272900
ES.14218.1	chr17	-	148	1	Intergenic	novelGene_11888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTTATTAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	6274115	6273967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6274000_6274100
ES.14219.1	chr17	+	4687	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	-188	0	-188	0	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6306946	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.10	chr17	+	4360	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	32	107	32	-107	multi-exon	FALSE	canonical	0	0	junction_14	255.117367291508	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACACCGTTTGACCAT	NA	False	NA	12	True	AATAAA	-22	NA	6307166	6358482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.100	chr17	+	5956	12	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	22412	0	-4721	0	3prime_fragment	FALSE	canonical	0	0	junction_9	257.471044669056	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6343156	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.101	chr17	+	1287	12	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	-2680	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	284.080101612611	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6345197	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
ES.14219.102	chr17	+	1505	12	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	-1886	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	354.350972300413	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6345991	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305_6355534_6355643
ES.14219.103	chr17	+	1316	9	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	27157	2531	24	19	3prime_fragment	FALSE	canonical	0	0	junction_6	292.337962596376	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6347901	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.104	chr17	+	3483	8	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	1019	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	377.739841365856	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGACTTTTTGTTGCT	NA	False	NA	37	True	AATAAA	-20	NA	6348896	6358588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6348982_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.105	chr17	+	3828	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3052	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	440.703099855472	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTTGTTGCTGTGACC	NA	False	NA	43	True	AATAAA	-26	NA	6350929	6358594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.106	chr17	+	3441	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3093	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.7376647993	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGAGACTTTTTGTTG	NA	False	NA	35	True	AATAAA	-44	NA	6350970	6358586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.107	chr17	+	868	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3099	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.045775447965	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6350976	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6351035_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.108	chr17	+	3317	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3099	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.7376647993	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCTAAGTCCAGAAGGAA	NA	False	NA	-2	True	AATAAA	-8	NA	6350976	6358468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.109	chr17	+	3498	6	ISM	ENSMUSG00000038141.12	ENSMUST00000231593.2	1517	9	3127	-2545	3127	-5	3prime_fragment	FALSE	canonical	0	0	junction_3	357.459032617725	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGAGACTTTTTGT	NA	False	NA	33	True	AATAAA	-42	NA	6351004	6358584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.110	chr17	+	3571	5	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	3798	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	407.879271353669	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6351675	6358583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.111	chr17	+	3171	3	ISM	ENSMUSG00000038141.12	ENSMUST00000231593.2	1517	9	6575	-2550	6575	0	3prime_fragment	FALSE	canonical	3	488	junction_2	159	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6354452	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6354611_6354851_6354919_6355643
ES.14219.15	chr17	+	1676	5	ISM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	72	16473	-18	-13923	5prime_fragment	FALSE	canonical	3	59	junction_1	236.602382701443	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6307206	6342116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831
ES.14219.16	chr17	+	3170	4	ISM	ENSMUSG00000038141.12	ENSMUST00000228334.2	5669	14	-9	16453	-9	-13903	5prime_fragment	FALSE	canonical	3	59	junction_1	254.571971923244	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	6307215	6342136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260
ES.14219.17	chr17	+	4302	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	-416	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.146317426256	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320328	6358582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320354_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.18	chr17	+	4785	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-380	0	-380	0	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320364	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.19	chr17	+	2096	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-222	2531	-222	19	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320522	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.2	chr17	+	2315	17	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	-9	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	289.604444674111	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6307125	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.20	chr17	+	4702	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-212	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	287.115977916741	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320532	6358582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.21	chr17	+	4809	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320678	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.22	chr17	+	5061	15	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-38	4	intron_retention	FALSE	canonical	0	0	junction_5	280.143512784255	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTTGTTGCTGTGAC	NA	False	NA	42	True	AATAAA	-25	NA	6320706	6358593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.23	chr17	+	4338	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-34	101	-34	-101	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTTTGACCATCAGTGC	NA	False	NA	18	True	AATAAA	-28	NA	6320710	6358488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.25	chr17	+	2638	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-33	2525	-33	25	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGAGTCTGTGGGAGG	NA	False	NA	NA	False	AATAAA	-35	NA	6320711	6356064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.26	chr17	+	2245	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-33	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320711	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.27	chr17	+	5531	15	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_12	205.136788609007	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320712	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.28	chr17	+	1796	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-32	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	287.115977916741	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAACCCAAATGGAT	NA	False	NA	NA	False	NA	NA	NA	6320712	6355856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.29	chr17	+	5164	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-30	-4	-30	4	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTTGTTGCTGTGAC	NA	False	NA	42	True	AATAAA	-25	NA	6320714	6358593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.3	chr17	+	1969	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	-1	2531	-1	19	multi-exon	FALSE	canonical	0	0	junction_14	255.117367291508	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6307133	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.30	chr17	+	2473	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-27	1959	-27	591	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATTGCCAGAAAGACT	NA	False	NA	NA	False	CATAAA	-20	NA	6320717	6356630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.31	chr17	+	3293	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-26	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.023376819703	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCCAGAAGGAACACCG	NA	False	NA	3	True	AATAAA	-13	NA	6320718	6358473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6356665
ES.14219.32	chr17	+	4412	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-26	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	287.115977916741	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAACACCGTTTGA	NA	False	NA	8	True	AATAAA	-18	NA	6320718	6358478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.33	chr17	+	4463	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-24	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	290.692050995741	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAACACCGTTTGACC	NA	False	NA	10	True	AATAAA	-20	NA	6320720	6358480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6325172_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.34	chr17	+	3317	16	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-18	19	intron_retention	FALSE	canonical	0	0	junction_13	223.188171729597	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320726	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.35	chr17	+	5181	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	290.8046586301	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTGTATGAGACTTT	NA	False	NA	29	True	AATAAA	-38	NA	6320732	6358580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321362_6325036_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353580_6354523_6354611_6354851_6354919_6355643
ES.14219.36	chr17	+	4246	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	256.203071489845	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320732	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643_6355843_6356011
ES.14219.37	chr17	+	4407	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	263.839321368139	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6320732	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345314_6346002_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.38	chr17	+	3800	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	256.203071489845	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGAGACTTTTTGTTG	NA	False	NA	35	True	AATAAA	-44	NA	6320735	6358586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643_6357084_6357694
ES.14219.39	chr17	+	4405	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	257.438152463364	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320735	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348135_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.4	chr17	+	4830	17	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	289.604444674111	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6307139	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.40	chr17	+	4741	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.866143455181	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320737	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355312
ES.14219.42	chr17	+	3516	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-6	895	-6	-895	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGTTCAAAGGGCTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	6320738	6357694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.43	chr17	+	5243	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_3	298.53275966592	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320739	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6338659_6338770_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.44	chr17	+	2371	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	294.134084007617	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320739	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345044_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.45	chr17	+	1789	6	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-13903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	276.580838092591	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	6320739	6342136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6338659_6338770_6339260_6339349_6340831
ES.14219.46	chr17	+	1679	5	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-5	16453	-5	-13903	5prime_fragment	FALSE	canonical	3	500	junction_1	49.2620543623589	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	6320739	6342136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831
ES.14219.47	chr17	+	1782	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320739	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
ES.14219.49	chr17	+	3386	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.023376819703	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320739	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6356665
ES.14219.5	chr17	+	5213	16	ISM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	11	0	11	0	intron_retention	FALSE	canonical	0	0	junction_14	261.918172124213	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307145	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.50	chr17	+	5225	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_15	295.447436103277	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320739	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.51	chr17	+	4634	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGAAGGAACACCGTTT	NA	False	NA	6	True	AATAAA	-16	NA	6320740	6358476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.52	chr17	+	4396	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	263.444016823309	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGAGACTTTTTGT	NA	False	NA	33	True	AATAAA	-42	NA	6320740	6358584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340946_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.53	chr17	+	9338	15	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_13	272.288637370009	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320740	6358582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6345310_6345996_6346078_6347502_6347603_6348160_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.54	chr17	+	3492	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-1255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	259.390202867707	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTCTCCATGGTTTA	NA	False	NA	NA	False	NA	NA	NA	6320740	6357334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.55	chr17	+	1767	16	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	271.874644316498	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320740	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.56	chr17	+	3936	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-4	473	-4	-473	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACAAGCACCCACAA	NA	False	NA	NA	False	NA	NA	NA	6320740	6358116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.58	chr17	+	4583	3	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	-4	17035	-4	-14485	intron_retention	FALSE	canonical	3	500	junction_1	35	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	6320740	6341554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200
ES.14219.59	chr17	+	6078	16	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	8	intron_retention	FALSE	canonical	0	0	junction_13	263.90035156391	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCCTTTTAAAAAAGCA	NA	False	NA	NA	False	AATAAA	-18	NA	6320740	6356047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6345310_6345996_6346078_6347502_6347603_6348160_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.6	chr17	+	1858	16	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	21	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	295.260111314301	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCCTTTTAAAAAAGCA	NA	False	NA	NA	False	AATAAA	-18	NA	6307155	6356047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354606_6355649
ES.14219.60	chr17	+	4519	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	290.034576151399	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320740	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6338659_6338770_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.61	chr17	+	3539	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	-4	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	256.068492135131	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACATTTTGAGATTTTGT	NA	False	NA	19	True	AATAAA	-28	NA	6320740	6358570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643_6355815_6356665
ES.14219.62	chr17	+	5021	16	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	0	109	0	-109	intron_retention	FALSE	canonical	0	0	junction_14	220.750195671236	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAACACCGTTTGACC	NA	False	NA	10	True	AATAAA	-20	NA	6320744	6358480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.63	chr17	+	4718	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	1	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	312.980028547983	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCCAGAAGGAACACCG	NA	False	NA	3	True	AATAAA	-13	NA	6320745	6358473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.64	chr17	+	1086	5	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	6	17035	6	-14485	5prime_fragment	FALSE	canonical	3	500	junction_1	49.2620543623589	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	6320750	6341554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831
ES.14219.67	chr17	+	875	1	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	25	-34395	mono-exon	FALSE	NA	NA	NA	NA	NA	548	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	6320769	6321644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320800_6321600
ES.14219.69	chr17	+	5004	15	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_7	274.216741700013	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320770	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.7	chr17	+	3848	18	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	284.417695661744	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6307165	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643_6357846_6358463
ES.14219.70	chr17	+	2789	16	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	27	19	intron_retention	FALSE	canonical	3	471	junction_10	149.725378239258	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6320771	6356058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6354611_6354851_6354919_6355643
ES.14219.72	chr17	+	5239	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	27	-7	intron_retention	FALSE	canonical	0	0	junction_2	299.108669372437	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6320771	6358582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6325172_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851
ES.14219.74	chr17	+	4850	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	316.44103295186	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6320772	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6325172_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.75	chr17	+	3672	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	288.409851105216	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6320772	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345044_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643_6355815_6356665
ES.14219.76	chr17	+	4260	16	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	28	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	271.874644316498	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6320772	6358583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.8	chr17	+	3446	17	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	291.853124180212	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307165	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6356665
ES.14219.81	chr17	+	4815	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	315.227879345966	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	36	True	AATAAA	-45	NA	6320780	6358587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6338659_6338770_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355305
ES.14219.82	chr17	+	5484	16	NIC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	37	-6	intron_retention	FALSE	canonical	0	0	junction_13	219.962259389095	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6320781	6358583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.83	chr17	+	4408	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	37	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.866143455181	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6320781	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355595
ES.14219.86	chr17	+	1972	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	166	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	262.725253056782	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTCTTTCCTTTTAA	NA	False	NA	NA	False	AATAAA	-11	NA	6320910	6356040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321151_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354523_6354611_6354851_6354919_6355643
ES.14219.87	chr17	+	4448	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	234	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.725253056782	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6320978	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321151_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.88	chr17	+	4485	18	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	309	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	317.367709409414	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6321053	6358583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321151_6330872_6330977_6337200_6337257_6338659_6338770_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.89	chr17	+	1868	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	360	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	278.628981577653	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6321104	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321317_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
ES.14219.9	chr17	+	1830	17	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	271.433348172254	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	32	True	AATAAA	-41	NA	6307166	6358583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354523_6354611_6354851_6354919_6358271
ES.14219.90	chr17	+	2884	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	549	1082	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.146317426256	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGGAATGGAAACTCA	NA	False	NA	NA	False	TTTAAA	-23	NA	6321293	6357121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321362_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.91	chr17	+	2026	18	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	594	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	302.290815315685	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGACTTTTTGTTGCT	NA	False	NA	37	True	AATAAA	-20	NA	6321338	6358588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321567_6325172_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
ES.14219.92	chr17	+	1871	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	599	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	277.097202033871	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	30	True	AATAAA	-39	NA	6321343	6358581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321567_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
ES.14219.93	chr17	+	3025	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	613	1082	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	261.331379370618	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGGAATGGAAACTCA	NA	False	NA	NA	False	TTTAAA	-23	NA	6321357	6357121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321567_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.94	chr17	+	4384	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	615	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	261.331379370618	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACACCGTTTGACCAT	NA	False	NA	12	True	AATAAA	-22	NA	6321359	6358482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321567_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.95	chr17	+	4412	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	694	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	261.331379370618	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6321438	6358589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6321567_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.96	chr17	+	2218	17	NNC	ENSMUSG00000038141.12	novel	1517	9	NA	NA	4105	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.146317426256	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGCAATTGAGTCTG	NA	False	NA	NA	False	AATAAA	-28	NA	6324849	6356057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6325316_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.97	chr17	+	5044	1	NIC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	-10785	-13903	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	6337092	6342136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6337100_6342100
ES.14219.98	chr17	+	4174	15	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	16455	7	-10678	-7	3prime_fragment	FALSE	canonical	0	0	junction_12	228.38483455138	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATGAGACTTTTT	NA	False	NA	31	True	AATAAA	-40	NA	6337199	6358582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ES.14219.99	chr17	+	215	1	Intergenic	novelGene_11889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGGCCTGTTTTGCT	NA	False	NA	NA	False	AAAACA	-18	NA	6341236	6341451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6341200_6341500
ES.1422.1	chr1	-	5675	1	Genic_Genomic	ENSMUSG00000003051.14	novel	NA	NA	NA	NA	3975	5575	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGATAAAGAAAATGCTG	NA	False	NA	NA	False	NA	NA	NA	135181412	135175737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135175700_135181400
ES.1422.10	chr1	-	1895	10	NNC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	201.593528212797	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGAGCTCTCTGTGTA	NA	False	NA	-7	True	AATAAA	-26	NA	135186195	135181313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135181885_135181972_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ES.1422.11	chr1	-	3450	5	NIC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	594	junction_1	28.0390352901094	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCCTGAGCTCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	135186196	135181318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135182119_135182662_135184329_135184516_135184613_135184742_135185521_135186086
ES.1422.12	chr1	-	1876	9	NNC	ENSMUSG00000003051.14	novel	1901	9	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_8	191.280839016876	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCCTGAGCTCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	135186220	135181318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185454_135186086
ES.1422.13	chr1	-	2141	9	NNC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	207.386565379728	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCCTGAGCTCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	135186019	135181318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135185747
ES.1422.14	chr1	-	1861	8	NIC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	217.3422017305	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGGCCTGAGCTCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	135186198	135181318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ES.1422.2	chr1	-	2997	6	NIC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-19	861	intron_retention	FALSE	canonical	1	1	junction_3	241.426262034601	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGATCCCTCTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	135186195	135180451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135182119_135182662_135182859_135183712_135184062_135184516_135185025_135185352_135185521_135186086
ES.1422.3	chr1	-	2009	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	-98	-10	32	6	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCTGTGTACTGAAAT	NA	False	NA	0	True	AATAAA	-33	NA	135186274	135181306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ES.1422.4	chr1	-	2079	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	18	-2	18	2	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTCTCTGTGTACTG	NA	False	NA	-4	True	AATAAA	-29	NA	135186288	135181310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ES.1422.6	chr1	-	1919	9	NNC	ENSMUSG00000003051.14	novel	2095	9	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_8	197.152700970593	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186196	135181311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185454_135186086
ES.1422.7	chr1	-	5384	8	ISM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	-2722	-1	-2722	1	intron_retention	FALSE	canonical	3	306	junction_7	110.454534002152	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135189028	135181311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352
ES.1422.9	chr1	-	1837	10	NNC	ENSMUSG00000003051.14	novel	1901	9	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.894529445482	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCTCTCTGTGTACT	NA	False	NA	-5	True	AATAAA	-28	NA	135186195	135181311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135181885_135181972_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ES.14220.1	chr17	-	5778	2	Antisense	novelGene_ENSMUSG00000038141.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6343586	6335804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6337255_6339258
ES.14221.1	chr17	-	1989	10	Antisense	novelGene_ENSMUSG00000038141.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	9.11382073529328	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCAGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	6356323	6346969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6347602_6348125_6348256_6348421_6348516_6349637_6349693_6351163_6351269_6351675_6351727_6353493_6353577_6354518_6354610_6354850_6354917_6355641
ES.14221.2	chr17	-	3344	9	Antisense	novelGene_ENSMUSG00000038141.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCATGCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	6356563	6346975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_6347602_6348125_6348256_6348421_6349695_6351166_6351269_6351675_6351727_6353493_6353579_6354520_6354610_6354850_6354917_6355641
ES.14222.1	chr17	-	4116	1	NIC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	6959	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTATGTAGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	6360734	6356618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6356600_6360700
ES.14222.10	chr17	-	3944	4	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	71	-2550	intron_retention	FALSE	canonical	3	145	junction_3	3493.38540037534	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6371940	6360818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6361219_6361567_6361646_6361983_6365234_6371724
ES.14222.11	chr17	-	4509	2	NIC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	33	-2550	intron_retention	FALSE	canonical	3	2579	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367742	6360818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6365234_6367648
ES.14222.12	chr17	-	3445	3	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-6	-2553	intron_retention	FALSE	canonical	3	5389	junction_2	872	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTGTGTTCCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	6367699	6360821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6361219_6361567_6362108_6365191
ES.14222.13	chr17	-	703	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	65	2553	-17	-2553	multi-exon	FALSE	canonical	3	2579	junction_4	2048.76394138027	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTGTGTTCCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	6367710	6360821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ES.14222.14	chr17	-	872	5	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	53	-2556	multi-exon	FALSE	canonical	3	145	junction_4	3028.61844534765	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAAGTTTTTGTGTTCCT	NA	False	NA	NA	False	AATAAA	-10	NA	6371958	6360824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6371724
ES.14222.15	chr17	-	6635	2	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	-36	2559	-36	-2559	intron_retention	FALSE	canonical	3	7133	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6367811	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6361219_6361567
ES.14222.16	chr17	-	3108	4	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	69	2559	-13	-2559	intron_retention	FALSE	canonical	3	5389	junction_3	1056.21725458775	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6367706	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191
ES.14222.17	chr17	-	769	4	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3321	5	NA	NA	111	-2559	multi-exon	FALSE	canonical	2	83	junction_3	3522.49088004497	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6371900	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6361219_6361567_6361646_6361983_6362108_6371724
ES.14222.18	chr17	-	3435	4	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-22	-2559	intron_retention	FALSE	non_canonical	0	0	junction_2	3296.42678601475	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6367715	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6361646_6361983_6362108_6362807_6365234_6367648
ES.14222.19	chr17	-	1369	3	ISM	ENSMUSG00000092074.3	ENSMUST00000232591.2	3541	4	-2	4213	-2	-2559	5prime_fragment	FALSE	canonical	3	2579	junction_2	1405	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6367695	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6362108_6365191_6365234_6367648
ES.14222.2	chr17	-	8869	3	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-16	2	intron_retention	TRUE	non_canonical	0	0	junction_1	3566.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTATGTAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6367709	6356619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6356931_6358802_6361219_6361567
ES.14222.20	chr17	-	689	4	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	31	-2559	combination_of_known_splicesites	FALSE	canonical	3	127	junction_3	3501.83516967255	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6367744	6360827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6361219_6361567_6361646_6361983_6362108_6367648
ES.14222.3	chr17	-	7352	1	NIC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	2093	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6365600	6358248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6358200_6365600
ES.14222.4	chr17	-	6353	2	Fusion	ENSMUSG00000118494.2_ENSMUSG00000092074.3	novel	3541	4	NA	NA	124	-775	intron_retention	FALSE	canonical	3	145	junction_1	0	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	6371887	6359043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6365234_6371724
ES.14222.5	chr17	-	8661	1	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-11	-775	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	6367704	6359043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6359000_6367700
ES.14222.6	chr17	-	6254	2	NIC	ENSMUSG00000092074.3	novel	3541	4	NA	NA	-23	-779	intron_retention	FALSE	canonical	3	2579	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	6367716	6359047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6365234_6367648
ES.14222.7	chr17	-	4099	3	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	12	-2550	intron_retention	FALSE	canonical	3	2579	junction_2	2277	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367681	6360818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6361219_6361567_6365234_6367648
ES.14222.8	chr17	-	6891	1	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-16	-2550	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367709	6360818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6360800_6367700
ES.14222.9	chr17	-	6199	3	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	71	2550	-11	-2550	intron_retention	FALSE	canonical	3	7133	junction_1	391.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367704	6360818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6361219_6361567_6361646_6361983
ES.14223.1	chr17	-	158	1	Intergenic	novelGene_11890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	6373183	6373025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6373000_6373200
ES.14224.1	chr17	-	1676	1	Intergenic	novelGene_11891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATTTGTCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	6377024	6375348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6375300_6377000
ES.14225.1	chr17	+	177	1	Intergenic	novelGene_11892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTCCTGTCTATT	NA	False	NA	NA	False	NA	NA	NA	6421504	6421681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6421500_6421700
ES.14226.1	chr17	+	285	1	Intergenic	novelGene_11893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGTAGATAACATACACC	4723	False	NA	NA	False	NA	NA	NA	6434908	6435193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6434900_6435200
ES.14227.1	chr17	-	8191	13	NIC	ENSMUSG00000116719.2	novel	1690	11	NA	NA	2727	21488	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	14.8518143298686	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAATTACATGT	NA	False	NA	NA	False	AATAAA	-13	NA	6459382	6385599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6389993_6391993_6394507_6401795_6401940_6407121_6407216_6408918_6409064_6411974_6412120_6419307_6419477_6425625_6425761_6428796_6428922_6431626_6431706_6433280_6433348_6447908_6447974_6459265
ES.14227.2	chr17	-	908	5	ISM	ENSMUSG00000116719.2	ENSMUST00000232402.2	1690	11	36194	-31	36194	31	3prime_fragment	FALSE	canonical	2	12	junction_1	7.59522876548166	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGTTTAAGTTAGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	6425915	6407056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6407216_6408918_6409064_6411974_6412120_6419307_6419477_6425625
ES.14228.1	chr17	+	241	1	Intergenic	novelGene_11894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAATTGCTACTTCAT	NA	False	NA	NA	False	NA	NA	NA	6462836	6463077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6462800_6463100
ES.14228.2	chr17	+	219	2	Intergenic	novelGene_11895	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	2311	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	6462836	6463502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6462887_6463333
ES.14228.3	chr17	+	173	2	Intergenic	novelGene_11896	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6462837	6463460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6462969_6463418
ES.14228.4	chr17	+	227	1	Intergenic	novelGene_11897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	6463280	6463507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6463300_6463500
ES.14228.5	chr17	+	585	1	Intergenic	novelGene_11898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCATGTGTGCCGG	NA	False	NA	NA	False	NA	NA	NA	6463283	6463868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6463300_6463900
ES.14229.1	chr17	+	176	1	Intergenic	novelGene_11899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTCCTGTCTATT	NA	False	NA	NA	False	NA	NA	NA	6639475	6639651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6639500_6639700
ES.1423.1	chr1	+	160	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135202770	135202930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135202800_135202900
ES.14230.1	chr17	+	3532	18	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6643675	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6643731_6646766_6646892_6651250_6651326_6653088_6653124_6665031_6665098_6670317_6670411_6676389_6676611_6694152_6694366_6695168_6695582_6709600_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.10	chr17	+	804	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	-35	2	-35	-2	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTGTGTTCCTTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	6697475	6703693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ES.14230.11	chr17	+	1075	4	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	25	-9	intron_retention	FALSE	canonical	3	3024	junction_1	2370.25376044188	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697535	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6697638_6699278_6699321_6702406_6702947_6703295
ES.14230.12	chr17	+	4170	3	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	25	0	intron_retention	FALSE	canonical	3	3024	junction_1	2894.5	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697535	6703695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6697638_6699278_6702947_6703295
ES.14230.13	chr17	+	737	5	Fusion	ENSMUSG00000000579.15_ENSMUSG00000096255.3	novel	771	5	NA	NA	25	342	multi-exon	TRUE	canonical	3	2828	junction_1	2765.51862224791	966	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697535	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_6697638_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ES.14230.14	chr17	+	1084	4	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	27	9	27	-9	intron_retention	FALSE	canonical	3	3024	junction_1	2381.31061019394	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697537	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868
ES.14230.15	chr17	+	864	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3592.95870418796	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697537	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6697638_6699278_6699321_6702108_6702362_6702868_6702947_6703295
ES.14230.17	chr17	+	4481	2	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	63	0	63	0	intron_retention	FALSE	canonical	3	3024	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697573	6703695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278
ES.14230.18	chr17	+	7052	2	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	65	-2573	65	2573	intron_retention	FALSE	canonical	3	3024	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6697575	6706268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278
ES.14230.19	chr17	+	3627	4	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	-2573	66	2573	intron_retention	FALSE	canonical	3	3024	junction_1	2381.31061019394	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6697576	6706268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868
ES.14230.2	chr17	+	241	1	Intergenic	novelGene_11901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAATTGCTACTTCAT	6541	False	NA	NA	False	NA	NA	NA	6679960	6680201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6680000_6680200
ES.14230.20	chr17	+	6119	1	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	66	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697576	6703695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6697600_6703700
ES.14230.21	chr17	+	1409	3	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	-17	66	17	intron_retention	FALSE	canonical	3	3024	junction_1	1255.5	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGGAGCATCACCCGAG	NA	False	NA	NA	False	AATAAA	-33	NA	6697576	6703712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278_6699321_6702406
ES.14230.22	chr17	+	3965	3	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	-2573	66	2573	intron_retention	FALSE	canonical	3	3024	junction_1	1255.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6697576	6706268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278_6699321_6702406
ES.14230.23	chr17	+	5595	3	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	66	-4203	66	4203	intron_retention	FALSE	canonical	3	3024	junction_1	1255.5	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6697576	6707898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278_6699321_6702406
ES.14230.24	chr17	+	1876	5	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	69	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3592.95870418796	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697579	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6697638_6699278_6699321_6701054_6702362_6702868_6702947_6703295
ES.14230.25	chr17	+	6249	2	ISM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	69	-1774	69	1774	intron_retention	FALSE	canonical	3	3024	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	6697579	6705469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_6697638_6699278
ES.14230.26	chr17	+	651	4	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	69	-9	combination_of_known_splicesites	FALSE	canonical	2	84	junction_1	4121.031990493	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697579	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6697638_6702406_6702531_6702868_6702947_6703295
ES.14230.27	chr17	+	3867	4	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	71	4203	intron_retention	FALSE	canonical	1	3	junction_3	2261.62640593003	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6697581	6707898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6697638_6699278_6699321_6702406_6705602_6707324
ES.14230.28	chr17	+	3781	4	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	76	0	intron_retention	FALSE	canonical	3	3024	junction_1	2735.10962607839	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697586	6703695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6697638_6699278_6702531_6702868_6702947_6703295
ES.14230.29	chr17	+	2664	3	NIC	ENSMUSG00000096255.3	novel	771	5	NA	NA	77	-9	intron_retention	FALSE	canonical	3	5535	junction_1	1639	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6697587	6703686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6699321_6702406_6702947_6703295
ES.14230.3	chr17	+	173	2	Intergenic	novelGene_11902	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAATATTTAAA	6542	False	NA	NA	False	NA	NA	NA	6679961	6683025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6680058_6682948
ES.14230.30	chr17	+	3267	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	77	-2573	77	2573	multi-exon	FALSE	canonical	3	3024	junction_1	2440.4692555941	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6697587	6706268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ES.14230.31	chr17	+	8679	1	Genic_Genomic	ENSMUSG00000096255.3	novel	NA	NA	NA	NA	79	2573	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACATCTCCCCCAACC	NA	False	NA	NA	False	NA	NA	NA	6697589	6706268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_6697600_6706300
ES.14230.33	chr17	+	6950	2	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	1563	4204	intron_retention	FALSE	non_canonical	0	0	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCATGTAGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	6699073	6707899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6705712_6707587
ES.14230.34	chr17	+	4029	2	Genic_Genomic	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-169406	351	multi-exon	TRUE	canonical	0	0	junction_1	0	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6699663	6875299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_6699713_6871319
ES.14230.35	chr17	+	191	1	Intergenic	novelGene_11908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTAAAAGAAAGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	6699663	6699854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6699700_6699900
ES.14230.36	chr17	+	175	1	Intergenic	novelGene_11909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	6699874	6700049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6699900_6700000
ES.14230.37	chr17	+	4597	9	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707239	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.38	chr17	+	3328	11	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6707507	6718367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708457_6708706_6708880_6709603_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.39	chr17	+	4727	9	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707507	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708880_6709603_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6716015_6716180_6716313_6716836
ES.14230.4	chr17	+	227	1	Intergenic	novelGene_11903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAGA	6985	False	NA	NA	False	NA	NA	NA	6680404	6680631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6680400_6680600
ES.14230.40	chr17	+	3605	10	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707507	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708880_6709603_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.41	chr17	+	5451	8	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707507	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6716015_6716180_6716313_6716836
ES.14230.42	chr17	+	3942	10	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707507	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6709216_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.45	chr17	+	3465	9	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	5.95294044989533	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6707957	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716014_6716180_6716919_6717855
ES.14230.47	chr17	+	2885	10	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6708198	6718368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708874_6709600_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716313_6716836
ES.14230.49	chr17	+	3275	9	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6708533	6718368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716013_6716180_6716313_6716836
ES.14230.5	chr17	+	1092	1	Intergenic	novelGene_11905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCATAAACATGTATCA	6987	False	NA	NA	False	AATATA	-8	NA	6680406	6681498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6680400_6681500
ES.14230.50	chr17	+	2550	10	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6708533	6718368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708880_6709603_6709670_6709910_6710001_6710946_6711032_6712713_6712760_6713167_6713272_6714742_6714802_6715923_6716015_6716180_6716311_6716835
ES.14230.51	chr17	+	2545	10	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6708533	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6708880_6709603_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713272_6714742_6714802_6715923_6716015_6716180_6716279_6716836
ES.14230.53	chr17	+	2726	2	Antisense	novelGene_ENSMUSG00000096780.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	6715502	6718394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6716015_6716180
ES.14230.54	chr17	+	3269	11	Antisense	novelGene_ENSMUSG00000093880.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGCAGTGGTGGCGCTC	NA	False	NA	NA	False	NA	NA	NA	6718438	6890152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6719368_6720054_6720166_6881151_6881219_6881459_6881550_6882632_6882716_6884475_6884528_6884933_6885036_6886505_6886563_6887684_6887778_6887943_6888076_6888599
ES.14230.55	chr17	+	2215	2	Antisense	novelGene_ENSMUSG00000093880.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	510	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGCAGTGGTGGCGCTC	NA	False	NA	NA	False	NA	NA	NA	6718438	6890152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6719288_6888786
ES.14230.56	chr17	+	812	1	Intergenic	novelGene_11910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAACATAAAT	NA	False	NA	NA	False	NA	NA	NA	6728752	6729564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6728800_6729600
ES.14230.57	chr17	+	2329	1	Antisense	novelGene_ENSMUSG00000116560.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCATACCTATAGGAA	9639	False	NA	NA	False	NA	NA	NA	6792503	6794832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_6792500_6794800
ES.14230.58	chr17	+	181	1	Intergenic	novelGene_11916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATTCCTGTCTATTA	NA	False	NA	NA	False	NA	NA	NA	6805500	6805681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6805500_6805700
ES.14230.59	chr17	+	176	1	Intergenic	novelGene_11917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGTAAA	4671	False	NA	NA	False	NA	NA	NA	6833147	6833323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6833100_6833300
ES.14230.60	chr17	+	769	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	56	1764	56	366	multi-exon	FALSE	canonical	3	5304	junction_1	1714.27572169707	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCCGGAGCATCACCCG	NA	False	NA	NA	False	AATAAA	-31	NA	6869125	6875314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ES.14230.61	chr17	+	6166	1	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-57	351	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869133	6875299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6869100_6875300
ES.14230.62	chr17	+	2352	4	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-22	342	intron_retention	FALSE	canonical	3	8493	junction_1	493.388960827729	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869168	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6870928_6874010_6874135_6874472_6874551_6874899
ES.14230.63	chr17	+	241	3	FSM	ENSMUSG00000000579.15	ENSMUST00000138598.8	3250	3	-17	3026	-17	-801	multi-exon	FALSE	canonical	3	5304	junction_1	1594.5	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTGTATTTTGATAGA	NA	False	NA	NA	False	AATACA	-17	NA	6869173	6874147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6869236_6870885_6870928_6874010
ES.14230.64	chr17	+	1045	4	FSM	ENSMUSG00000000579.15	ENSMUST00000124894.2	675	4	-28	-342	-16	342	multi-exon	FALSE	canonical	3	5304	junction_1	1851.44670160631	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869174	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472
ES.14230.65	chr17	+	4471	2	FSM	ENSMUSG00000000579.15	ENSMUST00000149027.8	493	2	-15	-3963	-15	348	multi-exon	FALSE	canonical	3	5304	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTGTGTTCCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	6869175	6875296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6869236_6870885
ES.14230.66	chr17	+	892	7	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-13	342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4267.37921133491	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869177	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6869236_6870885_6870928_6872661_6872711_6873123_6873274_6874010_6874135_6874472_6874551_6874899
ES.14230.67	chr17	+	742	6	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-13	342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4229.55933402051	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869177	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6869236_6870885_6870928_6872661_6872711_6874010_6874135_6874472_6874551_6874899
ES.14230.68	chr17	+	7897	1	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-13	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	6869177	6877074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6869200_6877100
ES.14230.69	chr17	+	960	7	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-11	342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4243.08535541454	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869179	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6869236_6870885_6870928_6872661_6872711_6873123_6873344_6874010_6874135_6874472_6874551_6874899
ES.14230.7	chr17	+	706	1	Intergenic	novelGene_11904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6987	False	NA	NA	False	NA	NA	NA	6680406	6681112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6680400_6681100
ES.14230.70	chr17	+	649	4	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-11	342	combination_of_known_splicesites	FALSE	canonical	3	155	junction_1	4390.69017606825	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869179	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6869236_6874010_6874135_6874472_6874551_6874899
ES.14230.71	chr17	+	3783	4	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-11	351	intron_retention	FALSE	canonical	3	5304	junction_1	1968.41069562901	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869179	6875299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6869236_6870885_6874135_6874472_6874551_6874899
ES.14230.72	chr17	+	911	6	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-11	342	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	4194.75856754593	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869179	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6869236_6870885_6870928_6873123_6873344_6874010_6874135_6874472_6874551_6874899
ES.14230.73	chr17	+	6245	2	FSM	ENSMUSG00000000579.15	ENSMUST00000149027.8	493	2	-6	-5746	-6	1	multi-exon	FALSE	canonical	3	5304	junction_1	0	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	6869184	6877079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6869236_6870885
ES.14230.75	chr17	+	3089	5	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-5	342	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	3829.38776927853	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869197	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6869236_6870885_6873344_6874010_6874135_6874472_6874551_6874899
ES.14230.77	chr17	+	4103	3	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-5	351	intron_retention	FALSE	canonical	3	5304	junction_1	1963	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869197	6875299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6869236_6870885_6874551_6874899
ES.14230.78	chr17	+	4958	2	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	781	342	intron_retention	FALSE	canonical	3	9230	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6869983	6875290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6874551_6874899
ES.14230.79	chr17	+	163	1	Genic_Genomic	ENSMUSG00000000579.15	novel	NA	NA	NA	NA	2068	100	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	6871270	6871433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_6871300_6871400
ES.14230.8	chr17	+	177	1	Intergenic	novelGene_11906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATATTTAAAAAA	9432	False	NA	NA	False	NA	NA	NA	6682851	6683028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6682900_6683000
ES.14230.9	chr17	+	186	1	Intergenic	novelGene_11907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	6684010	6684196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_6684000_6684200
ES.14231.1	chr17	-	1958	5	Intergenic	novelGene_11900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.2805141726785	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATTGTGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	6690438	6656559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6657501_6665032_6665098_6676389_6676609_6678820_6679356_6690240
ES.14232.1	chr17	-	5244	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	4	intron_retention	FALSE	canonical	0	0	junction_2	293.775832906657	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTGTTGCTGTGACCG	2349	False	NA	6	True	AATAAA	-27	NA	6744540	6705918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.11	chr17	-	4482	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10124	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	309.373535350068	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	2344	False	NA	-2	True	AATAAA	-45	NA	6744545	6705926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716279_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.12	chr17	-	4503	17	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23452	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	317.882815476081	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	-2	True	AATAAA	-45	NA	6757873	6705926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716930_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.13	chr17	-	5465	19	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10115	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	350.120437831976	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGAGACTTTTTGTTG	2353	False	NA	-3	True	AATAAA	-44	NA	6744536	6705927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716915_6717851_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6739982_6741039_6744415
ES.14232.14	chr17	-	4613	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10124	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	331.068366014904	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGAGACTTTTTGTTG	2344	False	NA	-3	True	AATAAA	-44	NA	6744545	6705927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6729753_6729852_6734317_6734422_6744415
ES.14232.15	chr17	-	4539	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-23386	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	313.58030769645	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGAGACTTTTTGTT	NA	False	NA	-4	True	AATAAA	-43	NA	6757807	6705928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.16	chr17	-	4277	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-4995	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	337.716225750182	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGAGACTTTTTGTT	7473	False	NA	-4	True	AATAAA	-43	NA	6739416	6705928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708457_6708706_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6739273
ES.14232.17	chr17	-	7488	15	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-6	intron_retention	FALSE	canonical	0	0	junction_2	261.567147113279	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGAGACTTTTTGTT	2348	False	NA	-4	True	AATAAA	-43	NA	6744541	6705928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.19	chr17	-	4696	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-23391	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	341.271313436978	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	-6	True	AATAAA	-41	NA	6757812	6705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720320_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.2	chr17	-	4421	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10120	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	314.033178772948	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTTGTTGCTGTGAC	2348	False	NA	4	True	AATAAA	-25	NA	6744541	6705920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716915_6717851_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.20	chr17	-	1963	17	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	-23447	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	321.711827572441	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	-6	True	AATAAA	-41	NA	6757868	6705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.21	chr17	-	4436	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	295.526014083363	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	2349	False	NA	-6	True	AATAAA	-41	NA	6744540	6705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716963_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.22	chr17	-	6311	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	-8	intron_retention	FALSE	canonical	0	0	junction_2	343.447389530041	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	2349	False	NA	-6	True	AATAAA	-41	NA	6744540	6705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6722330_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.23	chr17	-	4522	18	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23377	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	350.677150193479	378	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	False	NA	-6	True	AATAAA	-41	NA	6757798	6705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716930_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6729753_6729852_6734317_6734422_6757652
ES.14232.25	chr17	-	4493	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-9821	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	320.367757428865	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTGTATGAGACTTT	2647	False	NA	-9	True	AATAAA	-38	NA	6744242	6705933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744128
ES.14232.26	chr17	-	4107	5	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3435	-12	intron_retention	FALSE	canonical	0	0	junction_2	418.574366152539	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTTTGTATGAGACTT	NA	False	NA	-10	True	AATAAA	-37	NA	6713059	6705934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6712912
ES.14232.27	chr17	-	4417	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-26131	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	321.017109162425	381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTTTGTATGAGACTT	NA	False	NA	-10	True	AATAAA	-37	NA	6760552	6705934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6760513
ES.14232.28	chr17	-	4577	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10088	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	335.84312122794	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTTTGTATGAGACTT	2380	False	NA	-10	True	AATAAA	-37	NA	6744509	6705934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6723304_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.29	chr17	-	4116	16	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	-10119	-13	intron_retention	FALSE	canonical	0	0	junction_3	293.609597178899	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGTATGAGACT	2349	False	NA	-11	True	AATAAA	-36	NA	6744540	6705935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713173_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.3	chr17	-	4381	17	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10089	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	295.649067466397	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTTTTTGTTGCTGTG	2379	False	NA	2	True	AATAAA	-23	NA	6744510	6705922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716930_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.30	chr17	-	2156	2	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	8053	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGATTTTGTATGAGAC	NA	False	NA	-12	True	AATAAA	-35	NA	6708441	6705936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6706243_6706591
ES.14232.32	chr17	-	4426	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-23374	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	313.58030769645	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACCGTTTGACCATCA	NA	False	NA	-105	True	AATAAA	-24	NA	6757795	6706029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.33	chr17	-	1737	17	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	-10119	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.944099960861	373	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACACCGTTTGACCAT	2349	False	NA	-107	True	AATAAA	-22	NA	6744540	6706031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716279_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.35	chr17	-	5151	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23377	-110	intron_retention	FALSE	canonical	0	0	junction_2	318.767097144957	378	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACACCGTTTGACCA	NA	False	NA	-108	True	AATAAA	-21	NA	6757798	6706032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.36	chr17	-	3336	7	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3032	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	406.231871390384	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAACACCGTTTGACC	NA	False	NA	-109	True	AATAAA	-20	NA	6713462	6706033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
ES.14232.37	chr17	-	6660	15	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-1071	-118	intron_retention	FALSE	canonical	0	0	junction_3	344.875073507104	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCCAGAAGGAACACCG	8350	False	NA	-116	True	AATAAA	-13	NA	6735492	6706040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6735246
ES.14232.38	chr17	-	7028	15	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10127	-473	intron_retention	FALSE	canonical	0	0	junction_2	261.567147113279	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAGCACCCACAAAAGAG	2341	False	NA	NA	False	NA	NA	NA	6744548	6706395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.39	chr17	-	3630	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-23367	-896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	313.58030769645	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCAAAGGGCTGACTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	6757788	6706818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.4	chr17	-	4533	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10139	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	290.843486421391	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2329	False	NA	0	True	AATAAA	-21	NA	6744560	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.40	chr17	-	3013	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10079	119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	335.752905930582	348	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	2389	False	NA	NA	False	AATAAA	-29	NA	6744500	6708463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6722330_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.41	chr17	-	874	7	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3063	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	406.231871390384	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGCAATTGAGTCTG	NA	False	NA	NA	False	AATAAA	-28	NA	6713431	6708464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
ES.14232.42	chr17	-	1845	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10088	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	314.033178772948	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGCAATTGAGTCTG	2380	False	NA	NA	False	AATAAA	-28	NA	6744509	6708464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716915_6717851_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.44	chr17	-	1495	13	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-3856	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	355.489529459808	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCCTTTTAAAAAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	6721000	6708473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6720974
ES.14232.45	chr17	-	1929	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	309.373535350068	348	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCCTTTTAAAAAAGCA	2349	False	NA	NA	False	AATAAA	-18	NA	6744540	6708474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716279_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.46	chr17	-	4044	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-65	intron_retention	FALSE	canonical	0	0	junction_3	262.892238167826	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAAATGTGGGGTGGAG	2348	False	NA	NA	False	TTTAAA	-15	NA	6744541	6708647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.47	chr17	-	3231	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10124	-12874	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAACCACTCGCCCCTGA	2344	False	NA	NA	False	NA	NA	NA	6744545	6721674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.48	chr17	-	4765	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10088	-12874	intron_retention	FALSE	canonical	1	2	junction_3	291.92753809807	272	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAACCACTCGCCCCTGA	2380	False	NA	NA	False	NA	NA	NA	6744509	6721674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6726088_6728054_6728111_6729753_6729852_6734317_6734422_6744415
ES.14232.49	chr17	-	2948	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10088	-13121	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTCTGGCTTTAGATA	2380	False	NA	NA	False	NA	NA	NA	6744509	6721921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.5	chr17	-	5141	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10119	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	319.549096384265	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2349	False	NA	0	True	AATAAA	-21	NA	6744540	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716915_6717851_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.50	chr17	-	1138	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	-13966	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	272.183320576409	271	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGACTGTGCACTGGC	2349	False	NA	NA	False	AGTAAA	-40	NA	6744540	6722766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6723410_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.51	chr17	-	4693	1	NIC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	6490	-14438	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	6727931	6723238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6723200_6727900
ES.14232.52	chr17	-	1198	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23461	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	288.250758888854	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	NA	False	NA	NA	False	AATAAA	-15	NA	6757882	6723807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
ES.14232.53	chr17	-	4719	4	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	813	-15007	at_least_one_novel_splicesite	FALSE	canonical	2	55	junction_3	326.620404887522	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	7638	False	NA	NA	False	AATAAA	-15	NA	6733608	6723807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6729753
ES.14232.54	chr17	-	1114	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10141	-15008	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	2327	False	NA	NA	False	AATAAA	-14	NA	6744562	6723808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.55	chr17	-	760	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15008	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_1	242.285286387762	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	2348	False	NA	NA	False	AATAAA	-14	NA	6744541	6723808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724073_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.56	chr17	-	863	1	NIC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-7527	-15008	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	6724671	6723808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6723800_6724700
ES.14232.57	chr17	-	3059	4	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	-15008	intron_retention	FALSE	canonical	3	324	junction_2	193.591207330177	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGCGTGTTTCTTTTCCC	2349	False	NA	NA	False	AATAAA	-14	NA	6744540	6723808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6728111_6734317_6734422_6744415
ES.14232.58	chr17	-	989	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15112	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTGGCCTGTTTTGC	2348	False	NA	NA	False	AAAAAG	-16	NA	6744541	6723912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.59	chr17	-	2464	4	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10139	-15128	intron_retention	FALSE	canonical	3	324	junction_2	174.997777763668	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	2329	False	NA	NA	False	NA	NA	NA	6744560	6723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.6	chr17	-	2984	13	NNC	ENSMUSG00000096780.8	novel	2426	9	NA	NA	-5201	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	364.271037675093	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6722345	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720211_6720789
ES.14232.60	chr17	-	7280	6	NNC	ENSMUSG00000116560.2	novel	3159	6	NA	NA	3147	55261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.283968105746	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	6792965	6723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6723948_6774829_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929
ES.14232.61	chr17	-	5537	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10120	-15128	at_least_one_novel_splicesite	FALSE	canonical	2	55	junction_3	287.388239146977	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	2348	False	NA	NA	False	NA	NA	NA	6744541	6723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6729753_6734422_6744415
ES.14232.62	chr17	-	6237	2	Genic_Genomic	ENSMUSG00000116868.2	novel	985	8	NA	NA	-53	79362	multi-exon	TRUE	non_canonical	0	0	junction_1	0	542	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	6850155	6723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_6723948_6843937
ES.14232.63	chr17	-	5553	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-9433	-15128	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	359.214072664198	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTTTATCGTTTGTA	3035	False	NA	NA	False	NA	NA	NA	6743854	6723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6729753_6734422_6743712
ES.14232.64	chr17	-	1068	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-9532	-15148	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	312.644666514559	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	2936	False	NA	NA	False	NA	NA	NA	6743953	6723948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6743712
ES.14232.65	chr17	-	3263	1	NIC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	7194	-15164	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	6727227	6723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6724000_6727200
ES.14232.66	chr17	-	603	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	-15164	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_1	242.285286387762	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	2349	False	NA	NA	False	NA	NA	NA	6744540	6723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724073_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.67	chr17	-	963	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-9532	-15164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	333.812282578098	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	2936	False	NA	NA	False	NA	NA	NA	6743953	6723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6743712_6743825_6743913
ES.14232.68	chr17	-	3499	1	Intergenic	novelGene_11911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTTAAGTCCAGTG	NA	False	NA	NA	False	NA	NA	NA	6757827	6754328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6754300_6757800
ES.14232.69	chr17	-	3065	1	Intergenic	novelGene_11912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGACAGACTCATATTCT	NA	False	NA	NA	False	NA	NA	NA	6761941	6758876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6758900_6761900
ES.14232.7	chr17	-	4871	17	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10139	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	317.595039909316	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2329	False	NA	0	True	AATAAA	-21	NA	6744560	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6709216_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6717034_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.70	chr17	-	240	1	Intergenic	novelGene_11913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGACATTTCTAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	6760569	6760329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6760300_6760600
ES.14232.71	chr17	-	2081	1	Intergenic	novelGene_11914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6764550	6762469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6762500_6764600
ES.14232.72	chr17	-	8559	15	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	1545	4357	multi-exon	FALSE	non_canonical	0	0	junction_11	20.4899178791394	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTGCCAAGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	6848557	6774832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6848419
ES.14232.73	chr17	-	8754	16	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	1458	4353	multi-exon	FALSE	non_canonical	0	0	junction_7	16.2868726961999	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACATGTGTGCCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	6848644	6774836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809620_6809760_6812795_6812921_6815627_6815707_6817281_6817354_6819117_6819159_6831826_6831892_6841677_6841897_6844098_6844211_6848419
ES.14232.74	chr17	-	8582	16	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	2170	4351	multi-exon	FALSE	non_canonical	0	0	junction_11	16.2612012676391	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTACATGTGTGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	6847932	6774838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6844098_6844211_6847877
ES.14232.75	chr17	-	8675	16	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	1563	4351	multi-exon	FALSE	non_canonical	0	0	junction_11	15.8655461789235	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTACATGTGTGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	6848539	6774838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6844070_6844211_6848419
ES.14232.77	chr17	-	7939	8	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	3159	6	NA	NA	-8767	4351	multi-exon	TRUE	canonical	0	0	junction_7	10.7304639761222	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTACATGTGTGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	6804879	6774838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6804615
ES.14232.79	chr17	-	12954	15	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	1459	4345	multi-exon	FALSE	non_canonical	0	0	junction_11	15.6715327513141	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAATTACATGT	NA	False	NA	NA	False	AATAAA	-13	NA	6848643	6774844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6844098
ES.14232.8	chr17	-	6766	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10119	-2	intron_retention	FALSE	canonical	0	0	junction_3	262.892238167826	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	2349	False	NA	0	True	AATAAA	-21	NA	6744540	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
ES.14232.80	chr17	-	8755	16	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	3598	4345	multi-exon	FALSE	non_canonical	0	0	junction_11	15.8487293567094	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAATTACATGT	NA	False	NA	NA	False	AATAAA	-13	NA	6846504	6774844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6844098_6844211_6846270
ES.14232.81	chr17	-	4835	3	NNC	ENSMUSG00000116560.2	novel	3159	6	NA	NA	14358	4345	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	15.5	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAATTACATGT	3696	False	NA	NA	False	AATAAA	-13	NA	6781754	6774844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6776357_6776430_6779304_6781304
ES.14232.82	chr17	-	4052	2	ISM	ENSMUSG00000116560.2	ENSMUST00000231996.2	3159	6	14218	-3348	14218	3348	3prime_fragment	FALSE	canonical	3	32	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCCAAGTGTAGTGGAA	3556	False	NA	NA	False	AATAAA	-14	NA	6781894	6775841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6779304_6781304
ES.14232.83	chr17	-	3138	2	ISM	ENSMUSG00000116560.2	ENSMUST00000231996.2	3159	6	14374	-2590	14374	2590	3prime_fragment	FALSE	canonical	3	32	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTTAAGTAACAGAATT	3712	False	NA	NA	False	ATTAAA	-16	NA	6781738	6776599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6779304_6781304
ES.14232.84	chr17	-	4328	1	NIC	ENSMUSG00000116560.2	novel	3159	6	NA	NA	3233	-9362	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6792879	6788551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6788600_6792900
ES.14232.85	chr17	-	5468	11	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	11118	-10753	intron_retention	FALSE	non_canonical	0	0	junction_7	18.7160359050735	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCATGGAGTCAGGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	6838984	6789942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6838381_6838516_6838950
ES.14232.86	chr17	-	2577	13	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	10358	-10753	multi-exon	FALSE	non_canonical	0	0	junction_8	18.86133611386	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCATGGAGTCAGGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	6839744	6789942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6835612_6835706_6837633_6837810_6839700
ES.14232.87	chr17	-	2344	11	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	8343	-10755	multi-exon	FALSE	non_canonical	0	0	junction_8	16.5737744644966	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACTCATGGAGTCAGGA	NA	False	NA	NA	False	AATAAA	-15	NA	6841759	6789944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677
ES.14232.88	chr17	-	2902	13	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	4808	-11882	multi-exon	FALSE	non_canonical	0	0	junction_5	17.514081636088	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGCAGTTTAAGTTAG	NA	False	NA	NA	False	AATAAA	-15	NA	6845294	6791071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812216_6812569_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677_6841897_6844098
ES.14232.89	chr17	-	1321	11	Fusion	ENSMUSG00000116560.2_ENSMUSG00000116868.2	novel	985	8	NA	NA	8237	-11884	multi-exon	FALSE	non_canonical	0	0	junction_8	16.5737744644966	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTGGCAGTTTAAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	6841865	6791073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_6791227_6792929_6793075_6795963_6796109_6803306_6803476_6809624_6809760_6812795_6812921_6815627_6815707_6817281_6817358_6819117_6819159_6831826_6831892_6841677
ES.14232.9	chr17	-	3451	7	NNC	ENSMUSG00000096780.8	novel	1859	9	NA	NA	3026	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	406.231871390384	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6713468	6705924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6713365
ES.14232.90	chr17	-	177	1	Intergenic	novelGene_11915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGTAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	6796409	6796232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6796200_6796400
ES.14232.91	chr17	-	5455	1	Intergenic	novelGene_11918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	6848646	6843191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6843200_6848600
ES.14232.92	chr17	-	4112	2	Intergenic	novelGene_11919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	6848643	6843193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6844505_6845842
ES.14232.93	chr17	-	5071	2	Intergenic	novelGene_11920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	6848643	6843195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6848043_6848419
ES.14232.94	chr17	-	4727	1	Intergenic	novelGene_11921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGAAGACCTGCTACAT	NA	False	NA	NA	False	NA	NA	NA	6848645	6843918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6843900_6848600
ES.14232.95	chr17	-	3339	2	Intergenic	novelGene_11923	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6848643	6843966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6844505_6845842
ES.14232.96	chr17	-	326	2	Intergenic	novelGene_11922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6845003	6843966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6844211_6844921
ES.14233.1	chr17	-	131	1	Intergenic	novelGene_11924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6868694	6868563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6868600_6868700
ES.14234.1	chr17	-	4140	6	NNC	ENSMUSG00000093880.4	novel	1386	16	NA	NA	21965	3650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	282.528299467505	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	0	True	AATAAA	-21	NA	6885224	6877501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6881219_6881459_6881550_6882632_6882716_6884475_6884528_6884933_6885037_6885129
ES.14234.2	chr17	-	2307	10	NNC	ENSMUSG00000093880.4	novel	1386	16	NA	NA	18542	3648	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	261.652771511227	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGACTTTTTGTTGC	NA	False	NA	-2	True	AATAAA	-45	NA	6888647	6877503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6879087_6881151_6881219_6881459_6881550_6882632_6882716_6884475_6884528_6884933_6885037_6886506_6886565_6887686_6887779_6887944_6888076_6888599
ES.14234.3	chr17	-	4034	9	NNC	ENSMUSG00000093880.4	novel	1386	16	NA	NA	18868	3642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	249.178870241841	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTATGAGACTTTT	NA	False	NA	-8	True	AATAAA	-39	NA	6888321	6877509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6880426_6881151_6881219_6881459_6881550_6882632_6882716_6884475_6884528_6884933_6885037_6886506_6886565_6887490_6887779_6887944
ES.14234.4	chr17	-	894	7	NNC	ENSMUSG00000093880.4	novel	1386	16	NA	NA	21976	1141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	283.743869243607	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-29	NA	6885213	6880010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6880426_6881151_6881219_6881459_6881550_6882632_6882716_6884475_6884528_6884933_6885037_6885129
ES.14235.1	chr17	-	1697	5	NNC	ENSMUSG00000093880.4	novel	1386	16	NA	NA	-4981	-13844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	245.546329640661	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	6912170	6894995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6896297_6897764_6897853_6899827_6899884_6907085_6907190_6912022
ES.14235.2	chr17	-	212	1	Intergenic	novelGene_11925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTGGCCTGTTTTGC	NA	False	NA	NA	False	AAAACA	-17	NA	6895892	6895680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6895700_6895900
ES.14236.1	chr17	-	6810	2	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-13	1	intron_retention	FALSE	canonical	3	5415	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTAGCTTTGATTT	NA	False	NA	NA	False	AATAAA	-20	NA	6923230	6913999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6920752_6923172
ES.14236.10	chr17	-	4113	3	NIC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	5415	junction_2	1246.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTTTTTGTGTTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	6923224	6916341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6916737_6917085_6920752_6923172
ES.14236.11	chr17	-	879	6	NNC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3733.64293954309	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6923228	6916345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6916737_6917085_6917164_6917501_6917626_6918324_6918513_6920709_6920752_6923172
ES.14236.12	chr17	-	1386	3	ISM	ENSMUSG00000095677.3	ENSMUST00000232452.2	3545	4	-19	2345	-19	-9	5prime_fragment	FALSE	canonical	3	5415	junction_2	695	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6923236	6916345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_6917626_6920709_6920752_6923172
ES.14236.13	chr17	-	810	5	NNC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3220.55096218023	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6923228	6916345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_6916737_6916966_6917164_6917501_6917626_6920709_6920752_6923172
ES.14236.14	chr17	-	632	4	NIC	ENSMUSG00000095677.3	novel	771	5	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	3	141	junction_3	3846.09536485454	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAAGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	6923211	6916345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6916737_6917085_6917164_6917501_6917626_6923172
ES.14236.15	chr17	-	174	1	Intergenic	novelGene_11926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	6920153	6919979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6920000_6920200
ES.14236.2	chr17	-	3568	4	FSM	ENSMUSG00000095677.3	ENSMUST00000232452.2	3545	4	-22	-1	-22	1	multi-exon	FALSE	canonical	3	20	junction_1	2926.39994988154	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTAGCTTTGATTT	NA	False	NA	NA	False	AATAAA	-20	NA	6923239	6913999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6914260_6914426_6917626_6920709_6920752_6923172
ES.14236.3	chr17	-	3729	3	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-17	0	intron_retention	FALSE	canonical	3	5415	junction_2	695	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTAGCTTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	6923234	6914000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6917626_6920709_6920752_6923172
ES.14236.5	chr17	-	6645	3	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	20	junction_1	2697.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6923238	6914005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6914260_6914426_6920752_6923172
ES.14236.6	chr17	-	3031	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	71	-2331	-11	-5	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCATGTAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6923228	6914005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ES.14236.7	chr17	-	3343	1	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	5314	-560	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	6917903	6914560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6914600_6917900
ES.14236.8	chr17	-	790	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	-2	-17	-2	17	multi-exon	FALSE	canonical	3	5415	junction_4	1216.82506959711	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGGAGCATCACCCGAG	NA	False	NA	NA	False	AATAAA	-33	NA	6923301	6916319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ES.14236.9	chr17	-	4471	2	NIC	ENSMUSG00000095677.3	novel	771	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	5415	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923228	6916336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_6920752_6923172
ES.14237.1	chr17	+	2680	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	0	26	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTTTTTAGCTTTGTTA	NA	False	NA	32	True	AATAAA	-41	NA	6930412	7005469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.10	chr17	+	3757	14	NIC	ENSMUSG00000041831.18	novel	2423	16	NA	NA	-76	3	intron_retention	FALSE	canonical	3	23	junction_1	9.86716508149945	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCCCAGCATTTATTAA	NA	False	NA	9	True	AATAAA	-18	NA	6940905	7005446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.11	chr17	+	2499	15	NNC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	-397	376	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7608486565382	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGGCTGGAGTCTGGA	995	False	NA	NA	False	AATAAA	-14	NA	6942922	7005819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6943124_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.12	chr17	+	1962	15	NNC	ENSMUSG00000041831.18	novel	2423	16	NA	NA	384	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.4076830988479	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAACTCCCAGCATTTA	1776	False	NA	5	True	AATAAA	-14	NA	6943703	7005442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001421_7001556_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.13	chr17	+	1732	14	NNC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	3339	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5487399363893	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAACTCCCAGCATTT	4731	False	NA	4	True	AATAAA	-13	NA	6946658	7005441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6946690_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.14	chr17	+	1681	13	FSM	ENSMUSG00000041831.18	ENSMUST00000231743.2	1720	13	45	-6	45	4	multi-exon	FALSE	canonical	0	0	junction_1	15.8377186909395	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCCAGCATTTATTAAC	NA	False	NA	10	True	AATAAA	-19	NA	6956515	7005447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_6956555_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.2	chr17	+	2743	17	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.0679703578679	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGTAACTCCCAGCAT	NA	False	NA	2	True	AATAAA	-11	NA	6930414	7005439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6930610_6940859_6941395_6943610_6943830_6949323_6949417_6954658_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.3	chr17	+	1964	12	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	13	-1102	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	14.7109898762964	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	6930425	7000571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350
ES.14237.4	chr17	+	5489	17	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.2052661049168	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCCAGCATTTATTAAC	NA	False	NA	10	True	AATAAA	-19	NA	6930426	7005447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6973009_6973232_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001421_7001556_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.5	chr17	+	2486	14	NIC	ENSMUSG00000041831.18	novel	2021	14	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	19.3647639500263	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGTAACTCCCAGCAT	NA	False	NA	2	True	AATAAA	-11	NA	6930430	7005439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.6	chr17	+	4161	15	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	71	3	intron_retention	FALSE	canonical	3	13	junction_1	13.8830758810275	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCCCAGCATTTATTAA	NA	False	NA	9	True	AATAAA	-18	NA	6930483	7005446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.7	chr17	+	2023	15	NNC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	508	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0020406775144	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCCAGCATTTATTAAC	NA	False	NA	10	True	AATAAA	-19	NA	6930920	7005447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6931018_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.8	chr17	+	2396	15	NNC	ENSMUSG00000041831.18	novel	1504	9	NA	NA	517	386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0020406775144	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGGATGCTCTCGGT	NA	False	NA	NA	False	AATAAA	-24	NA	6930929	7005829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6931018_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14237.9	chr17	+	2523	16	NNC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	537	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.8554582259724	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAACTCCCAGCATTT	NA	False	NA	4	True	AATAAA	-13	NA	6930949	7005441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_6931018_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ES.14238.1	chr17	-	173	1	Intergenic	novelGene_11927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	6936821	6936648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_6936600_6936800
ES.14239.1	chr17	-	3561	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	-401	4	-401	-4	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGTTGAGCGTTTATT	NA	False	NA	-3	True	AATAAA	-16	NA	7050584	7005443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.11	chr17	-	4958	10	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	30	-234	intron_retention	FALSE	canonical	3	786	junction_4	60.0185156616041	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050153	7005673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7008455_7008819_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.14	chr17	-	2331	14	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	-33	-234	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	249.666689050225	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTGATTGCATGGG	NA	False	NA	-1	True	AATAAA	-14	NA	7050216	7005673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7006029_7006660_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.17	chr17	-	8519	12	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	31	-236	intron_retention	FALSE	canonical	3	824	junction_5	66.3660024484806	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTCTGATTGCATG	NA	False	NA	-3	True	AATAAA	-12	NA	7050152	7005675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.18	chr17	-	2826	13	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	16766	-238	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	264.54430158293	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGTGTCTGATTGCA	NA	False	NA	-5	True	AATAAA	-10	NA	7033417	7005677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7033364
ES.14239.2	chr17	-	3643	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	-712	233	-712	-233	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGATTGCATGGGG	NA	False	NA	0	True	AATAAA	-15	NA	7050895	7005672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.20	chr17	-	2783	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	-9	390	-9	-390	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGAAGGGACGCCGGC	NA	False	NA	NA	False	AATACA	-22	NA	7050192	7005829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.21	chr17	-	3329	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	-724	559	-724	-559	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGAGACACTTGATCTGA	NA	False	NA	0	True	AATAAA	-25	NA	7050907	7005998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.22	chr17	-	6904	13	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	31	-560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	264.392214438239	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCGAGACACTTGATCTG	NA	False	NA	-1	True	AATAAA	-24	NA	7050152	7005999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7012120_7012198_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.23	chr17	-	6080	5	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	-4087	-568	intron_retention	FALSE	canonical	3	824	junction_4	86.7827747885489	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATGTAACCGAGACAC	NA	False	NA	-9	True	AATAAA	-16	NA	7014307	7006007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7007281_7008361_7008981_7009752_7009884_7010088
ES.14239.24	chr17	-	3335	12	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	31	-570	intron_retention	FALSE	canonical	3	786	junction_6	76.3906878492571	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACCATGTAACCGAGAC	NA	False	NA	-11	True	AATAAA	-14	NA	7050152	7006009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.25	chr17	-	3526	12	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	30	-570	intron_retention	FALSE	canonical	3	786	junction_7	75.4210221258794	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACCATGTAACCGAGAC	NA	False	NA	-11	True	AATAAA	-14	NA	7050153	7006009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7023343_7026877_7026962_7050030
ES.14239.3	chr17	-	2333	11	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	-11850	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	290.169278180858	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGATTGCATGGGG	NA	False	NA	0	True	AATAAA	-15	NA	7022070	7005672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7006072_7006122_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009
ES.14239.32	chr17	-	2727	12	NIC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	66	-576	intron_retention	FALSE	canonical	3	786	junction_6	72.503633422775	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAGAACCATGTAAC	NA	False	NA	-17	True	AATAAA	-8	NA	7050117	7006015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.34	chr17	-	4179	7	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	31	5949	31	-3153	5prime_fragment	FALSE	canonical	3	786	junction_1	65.8499978908293	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTGGACTCCTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	7050152	7011388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.14239.5	chr17	-	2894	13	NNC	ENSMUSG00000052397.9	novel	3164	13	NA	NA	31	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	262.877387451514	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGATTGCATGGGG	NA	False	NA	0	True	AATAAA	-15	NA	7050152	7005672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020523_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ES.1424.1	chr1	-	8226	6	NNC	ENSMUSG00000041926.16	novel	2171	10	NA	NA	942	3	intron_retention	TRUE	non_canonical	0	0	junction_4	140.197860183385	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAGTTATAGAATGACT	NA	False	NA	-11	True	AATAAA	-25	NA	135204214	135190446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135190868_135191790_135195021_135195820_135195935_135199266_135202902_135203338_135203541_135203590
ES.1424.12	chr1	-	2998	9	NIC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	74	-4	intron_retention	FALSE	canonical	3	249	junction_6	16.7182534973005	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAAGTTGGAGTTATAG	NA	False	NA	-18	True	AATAAA	-18	NA	135211748	135190453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135195021_135195820_135195935_135199266_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.13	chr1	-	4473	4	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	13520	8	1074	-8	intron_retention	FALSE	canonical	3	267	junction_3	13.9602610609146	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGATAAGTTGGAGTT	NA	False	NA	-22	True	AATAAA	-14	NA	135198302	135190457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607
ES.1424.14	chr1	-	2378	11	NNC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	76	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.6207737925202	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAGATAAGTTGGAG	NA	False	NA	-24	True	AATAAA	-12	NA	135211746	135190459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135191044_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.15	chr1	-	3438	5	NNC	ENSMUSG00000041926.16	novel	535	2	NA	NA	57	1944	intron_retention	TRUE	non_canonical	0	0	junction_1	123.596874960494	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	135211765	135197343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135198736_135198926_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.16	chr1	-	2922	6	NNC	ENSMUSG00000041926.16	novel	574	3	NA	NA	-24	1944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.481071423644	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	135211846	135197343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135198736_135198926_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.17	chr1	-	2222	5	NNC	ENSMUSG00000041926.16	novel	535	2	NA	NA	51	315	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	148.752100825501	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACTCAAAAGCATGTCAA	NA	False	NA	NA	False	AAGAAA	-1	NA	135211771	135203264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135203474_135203522_135204774_135205126_135205276_135206504_135206646_135211299
ES.1424.18	chr1	-	162	1	FSM	ENSMUSG00000041926.16	ENSMUST00000189615.2	2275	1	2113	0	-384	0	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	135205540	135205378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135205400_135205500
ES.1424.19	chr1	-	1448	2	Genic_Genomic	ENSMUSG00000041926.16	novel	2288	11	NA	NA	48	-4905	multi-exon	TRUE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAACCCTCCCTAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	135211774	135210283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135211007_135211049
ES.1424.2	chr1	-	2439	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	-150	-1	-150	1	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGGAGTTATAGAATGA	NA	False	NA	-13	True	AATAAA	-23	NA	135211972	135190448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.20	chr1	-	805	2	Genic_Genomic	ENSMUSG00000041926.16	novel	2288	11	NA	NA	42	-5554	multi-exon	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGCTTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	135211780	135210932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135211007_135211049
ES.1424.4	chr1	-	2297	11	NNC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	76.8923923415054	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTTGGAGTTATAGAAT	NA	False	NA	-15	True	AATAAA	-21	NA	135211791	135190450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194866_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.5	chr1	-	1833	9	NNC	ENSMUSG00000041926.16	novel	2171	10	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	96.2782426096364	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTTGGAGTTATAGA	NA	False	NA	-17	True	AATAAA	-19	NA	135211796	135190452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199436_135206597_135206646_135211299
ES.1424.6	chr1	-	1593	10	NNC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.2847938062354	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTTGGAGTTATAGA	NA	False	NA	-17	True	AATAAA	-19	NA	135211791	135190452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135190522_135193092_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.8	chr1	-	2113	10	NIC	ENSMUSG00000041926.16	novel	2288	11	NA	NA	58	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	92.512394898611	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTTGGAGTTATAGA	NA	False	NA	-17	True	AATAAA	-19	NA	135211764	135190452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ES.1424.9	chr1	-	2191	10	FSM	ENSMUSG00000041926.16	ENSMUST00000074357.8	2171	10	-23	3	-23	-3	multi-exon	FALSE	canonical	3	54	junction_7	75.0946727574148	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGTTGGAGTTATAGA	NA	False	NA	-17	True	AATAAA	-19	NA	135211845	135190452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135205126_135205276_135206504_135206646_135211299
ES.14240.1	chr17	-	184	1	Intergenic	novelGene_11928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGACACTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	7052476	7052292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_7052300_7052500
ES.14241.1	chr17	-	1244	2	Intergenic	novelGene_11929	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCTGTGTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	7095594	7094250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_7095143_7095242
ES.14242.1	chr17	+	152	1	Intergenic	novelGene_11930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7114868	7115020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7114900_7115000
ES.14243.1	chr17	+	158	1	Intergenic	novelGene_11931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAGGGAGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7135756	7135914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7135800_7135900
ES.14244.1	chr17	-	171	1	Intergenic	novelGene_11932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCCTTGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	7146755	7146584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_7146600_7146800
ES.14245.1	chr17	+	167	1	Intergenic	novelGene_11933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAATAATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	7206408	7206575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7206400_7206600
ES.14246.1	chr17	-	3108	5	NNC	ENSMUSG00000023806.11	novel	2243	8	NA	NA	10	-4145	intron_retention	TRUE	non_canonical	0	0	junction_4	32.9725264424793	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7215745	7176259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7178823_7181355_7181498_7209067_7209156_7215376_7215661_7215714
ES.14246.2	chr17	-	4588	4	NNC	ENSMUSG00000023806.11	novel	1263	3	NA	NA	13	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.9550023504018	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTCTGTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	7215742	7188259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7192448_7209067_7209156_7215376_7215661_7215714
ES.14246.3	chr17	-	4957	1	Genic_Genomic	ENSMUSG00000023806.11	novel	NA	NA	NA	NA	22459	3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTCAGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	7193221	7188264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_7188300_7193200
ES.14246.4	chr17	-	1280	4	NNC	ENSMUSG00000023806.11	novel	1263	3	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.4916323558806	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTCAGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	7215747	7188264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7189139_7209067_7209156_7215376_7215662_7215714
ES.14247.1	chr17	+	4881	3	NNC	ENSMUSG00000116618.2	novel	667	2	NA	NA	3892	3619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAAGATTATAAGTCAGT	NA	False	NA	NA	False	AAAACA	-45	NA	7219736	7228214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7224424_7225052_7225170_7228137
ES.14247.2	chr17	+	3454	1	Antisense	novelGene_ENSMUSG00000052031.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAAGATTATAAGTCAGT	NA	False	NA	NA	False	AAAACA	-45	NA	7224760	7228214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_7224800_7228200
ES.14248.3	chr17	-	2402	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	-87	-3	-87	3	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGTTCCATTCAGCC	NA	False	NA	-16	True	AATAAA	-22	NA	7228642	7222406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
ES.14248.4	chr17	-	2270	4	NNC	ENSMUSG00000052031.9	novel	2312	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.371941980535	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACACACTGTTCCATTC	NA	False	NA	-20	True	AATAAA	-18	NA	7228556	7222410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7224424_7225052_7225168_7228135_7228190_7228468
ES.14248.5	chr17	-	2291	4	NNC	ENSMUSG00000052031.9	novel	2312	4	NA	NA	-39	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	227.371941980535	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTACTTGCCGATGTT	NA	False	NA	-78	True	AATAAA	-21	NA	7228594	7222468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7224424_7225052_7225168_7228135_7228190_7228427
ES.14249.1	chr17	+	991	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	286	506	-26	2	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGCTTTTTCTTGTGT	NA	False	NA	NA	False	AAAAAG	-13	NA	7246279	7265591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
ES.14249.2	chr17	+	912	8	NNC	ENSMUSG00000094724.9	novel	1783	9	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	316.838399548684	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGTGTTTGGCTTTT	NA	False	NA	NA	False	AAAAAG	-5	NA	7246303	7265583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7246498_7248506_7248568_7251537_7251590_7252454_7252513_7256120_7256192_7259079_7259194_7263832_7263908_7265296
ES.14249.3	chr17	+	1274	11	NNC	ENSMUSG00000094724.9	novel	2448	10	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	353.128432726678	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	NA	False	AAAAAG	-7	NA	7246312	7265585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7258358_7258440_7259079_7259194_7260468_7260710_7262027_7262074_7263832_7263908_7265296
ES.14249.4	chr17	+	1815	8	NIC	ENSMUSG00000094724.9	novel	1783	9	NA	NA	7	-5	intron_retention	FALSE	canonical	3	652	junction_3	39.1329497367888	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	NA	False	AAAAAG	-6	NA	7246312	7265584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7246498_7248506_7248568_7251537_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
ES.14249.5	chr17	+	4833	5	ISM	ENSMUSG00000094724.9	ENSMUST00000232245.2	631	7	5484	-116	5484	4	3prime_fragment	FALSE	canonical	3	688	junction_1	31.2089730686545	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	NA	False	AAAAAG	-15	NA	7251890	7265593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
ES.14249.6	chr17	+	5729	3	NIC	ENSMUSG00000094724.9	novel	631	7	NA	NA	-2475	-4	intron_retention	FALSE	canonical	3	688	junction_1	43	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	NA	False	AAAAAG	-7	NA	7255579	7265585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7256192_7259079_7263908_7265296
ES.1425.1	chr1	+	176	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	135213241	135213417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135213200_135213400
ES.14250.1	chr17	-	173	1	Intergenic	novelGene_11934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATATCACAAAGTT	NA	False	NA	NA	False	NA	NA	NA	7283152	7282979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_7283000_7283200
ES.14251.1	chr17	+	171	1	Intergenic	novelGene_11935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACATACATACATACAT	NA	False	NA	NA	False	NA	NA	NA	7315499	7315670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7315500_7315700
ES.14252.1	chr17	+	193	1	Intergenic	novelGene_11936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCAATATGAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	7403446	7403639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7403400_7403600
ES.14253.1	chr17	+	5035	21	NNC	ENSMUSG00000023809.11	novel	924	8	NA	NA	-31821	-379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1954973901245	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCCCTGCATTGTACC	NA	False	NA	NA	False	ATTAAA	-29	NA	7405692	7570335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7406030_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.10	chr17	+	5432	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.9116630545723	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7437507	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503421_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.11	chr17	+	2790	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-4	2620	-4	-2620	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCCACTGTCTC	NA	False	NA	NA	False	NA	NA	NA	7437509	7568094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.12	chr17	+	5208	19	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	43.6223976902567	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7437509	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.13	chr17	+	5007	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	9	390	-3	-390	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTTTGGGATTTCCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	7437522	7570324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.14	chr17	+	1392	9	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-1	-14	intron_retention	FALSE	canonical	0	0	junction_7	63.3556430004463	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7437524	7530024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7528402_7528474_7529526
ES.14253.15	chr17	+	5408	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.1690348478596	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATATTTTTCTGGGATA	NA	False	NA	NA	False	AATAAA	-17	NA	7437524	7570709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516672_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.16	chr17	+	2548	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	-2843	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	40.9737720987463	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTCTGTTTCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	7437525	7567871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550145_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.17	chr17	+	5399	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	42.0350746401145	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAATATTTTTCTGGGA	NA	False	NA	NA	False	AATAAA	-15	NA	7437525	7570707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566669_7566820_7567614
ES.14253.18	chr17	+	2246	15	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	49.2281237024661	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAAGTGTGTGTCAC	NA	False	NA	NA	False	ATTAAA	-13	NA	7437525	7553434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7552738
ES.14253.19	chr17	+	5309	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	41.9692540146769	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7437525	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7495311_7495429_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.2	chr17	+	5273	10	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-148	37111	-148	3565	5prime_fragment	FALSE	canonical	3	167	junction_7	9.98888270918113	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTGTTTATTTTGAG	NA	False	NA	NA	False	CATAAA	-15	NA	7437365	7533603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526
ES.14253.21	chr17	+	5384	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.4304136204209	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTGGGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	7437539	7570712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529622_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.25	chr17	+	4896	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	23	-393	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	41.9692540146769	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCCCTTTGGGATTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	7437548	7570321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7495311_7495429_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.26	chr17	+	4350	8	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	41	43928	29	-2	5prime_fragment	FALSE	canonical	3	167	junction_7	10.8024940430912	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACCTCCTCATTTCTCG	NA	False	NA	NA	False	AATAAA	-16	NA	7437554	7526786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229
ES.14253.27	chr17	+	1502	10	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	44	40690	32	-14	5prime_fragment	FALSE	canonical	3	167	junction_7	9.98888270918113	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7437557	7530024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526
ES.14253.28	chr17	+	1182	9	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	32	-30	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	62.6178888178131	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAATAAAAAAAGAT	NA	False	NA	NA	False	ACTAAA	-29	NA	7437557	7526758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7526509
ES.14253.3	chr17	+	5471	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-52	-13	-52	13	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGACCCTTTGCACTT	NA	False	NA	NA	False	AATAAA	-35	NA	7437461	7570727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.30	chr17	+	2227	19	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	59	7065	47	-7065	5prime_fragment	FALSE	canonical	3	158	junction_15	13.1946491212195	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAGTGACTCCTGCAT	NA	False	NA	NA	False	TATAAA	-16	NA	7437572	7563649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413
ES.14253.32	chr17	+	4520	1	Intergenic	novelGene_11937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTTGA	NA	False	NA	NA	False	NA	NA	NA	7438906	7443426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7438900_7443400
ES.14253.33	chr17	+	4151	1	Intergenic	novelGene_11938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7449061	7453212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7449100_7453200
ES.14253.34	chr17	+	179	1	Intergenic	novelGene_11939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	7458414	7458593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7458400_7458600
ES.14253.35	chr17	+	4877	18	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	76585	3	-9161	-3	3prime_fragment	FALSE	canonical	3	147	junction_16	14.9749502486017	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7514098	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.36	chr17	+	1688	1	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	302	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7528336	7530024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7528300_7530000
ES.14253.37	chr17	+	3709	9	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	111653	393	21132	-393	3prime_fragment	FALSE	canonical	3	147	junction_7	16.5751131217859	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCCCTTTGGGATTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	7549166	7570321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.38	chr17	+	3970	8	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	112626	3	22105	-3	3prime_fragment	FALSE	canonical	3	147	junction_6	15.8461995701281	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7550139	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.39	chr17	+	6278	4	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	31721	-1	intron_retention	FALSE	canonical	3	147	junction_2	19.7371617907833	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTGGGATAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	7559755	7570713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.4	chr17	+	2022	15	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-23	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	49.4793813994624	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGTGTGTCACCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	7437490	7553438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7553001
ES.14253.5	chr17	+	2404	17	ISM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-23	10000	-23	7279	5prime_fragment	FALSE	canonical	3	158	junction_15	12.7174830450054	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCTTGTGAAAGAGTCA	NA	False	NA	NA	False	NA	NA	NA	7437490	7560714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144
ES.14253.6	chr17	+	3956	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	-23	1473	-23	-1473	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCATTTCCAGTGTCCC	NA	False	NA	NA	False	TATAAA	-22	NA	7437490	7569241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.7	chr17	+	5309	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	41.8400198090026	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTTTCTGGGATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7437490	7570711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_7437843_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14253.8	chr17	+	5402	21	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-20	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.4708774502398	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTGTAATATTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	7437493	7570702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521843_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566814_7567614
ES.14253.9	chr17	+	4726	18	NNC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	-14	-391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.6412070876473	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTTTGGGATTTCCC	NA	False	NA	NA	False	ATTAAA	-17	NA	7437499	7570323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_7437843_7495311_7495369_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ES.14254.1	chr17	+	1382	6	ISM	ENSMUSG00000071322.13	ENSMUST00000138222.8	1838	12	8274	-89	8139	89	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAGTGTCTAGACAGAA	NA	False	NA	NA	False	NA	NA	NA	7600406	7613000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_7600682_7601685_7601785_7604295_7604437_7606429_7606515_7610847_7610966_7612336
ES.14255.1	chr17	-	4592	14	Fusion	ENSMUSG00000056133.6_ENSMUSG00000079722.3	novel	2649	10	NA	NA	-21146	9	multi-exon	FALSE	canonical	0	0	junction_1	5.45666087722099	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAGGTGAATTTTTGA	NA	False	NA	NA	False	AATAAA	-32	NA	7674009	7618274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_7619851_7620020_7620121_7631346_7631457_7637075_7637208_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7664386_7664816_7667713_7667920_7673061
ES.14255.2	chr17	-	2970	10	NNC	ENSMUSG00000056133.6	novel	2649	10	NA	NA	-12027	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.20208884920872	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGTCTTGCCCAAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	7664890	7630213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7631457_7637075_7637208_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7664386
ES.14255.4	chr17	-	2569	10	NNC	ENSMUSG00000056133.6	novel	2649	10	NA	NA	-2350	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.4997194092287	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACGTCTTGCCCAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	7655213	7630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7631457_7637075_7637205_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7655106
ES.14255.5	chr17	-	3402	10	NNC	ENSMUSG00000056133.6	novel	2649	10	NA	NA	-5269	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.35412613473634	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTACGTCTTGCCCAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7658132	7630215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7631457_7637075_7637208_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7657194
ES.14255.6	chr17	-	2852	10	NNC	ENSMUSG00000056133.6	novel	2649	10	NA	NA	-11686	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.71115434484284	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTACGTCTTGCCCAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	7664549	7630215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_7631682_7637075_7637208_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7664386
ES.14255.7	chr17	-	1933	2	Intergenic	novelGene_11940	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAGAGGGAACTTGT	NA	False	NA	NA	False	NA	NA	NA	7673987	7666912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_7667920_7673061
ES.14256.1	chr17	+	177	1	Intergenic	novelGene_11941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTATCCTAAG	NA	False	NA	NA	False	NA	NA	NA	7712824	7713001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7712800_7713000
ES.14257.1	chr17	+	208	1	Intergenic	novelGene_11942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCTCTTACTGCTATGG	NA	False	NA	NA	False	NA	NA	NA	7808803	7809011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7808800_7809000
ES.14258.1	chr17	+	152	1	Intergenic	novelGene_11943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7895412	7895564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_7895400_7895600
ES.14259.1	chr17	+	5442	2	Antisense	novelGene_ENSMUSG00000071984.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGAAGCTCTCATTATT	NA	False	NA	NA	False	NA	NA	NA	7990529	7996128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_7995359_7995515
ES.14259.2	chr17	+	3615	3	Antisense	novelGene_ENSMUSG00000071984.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGCCTTTGGATCATCT	NA	False	NA	NA	False	AATAAA	-16	NA	7990535	7995636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_7990799_7992127_7995314_7995470
ES.14259.3	chr17	+	1770	2	Antisense	novelGene_ENSMUSG00000071984.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTCCACCCCATCTCT	NA	False	NA	NA	False	AATAAA	-31	NA	7990564	7993719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_7990743_7992127
ES.1426.1	chr1	-	4324	1	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTGATTTATTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	135221341	135217017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135217000_135221300
ES.14260.1	chr17	-	3514	13	ISM	ENSMUSG00000071984.12	ENSMUST00000097425.10	5845	20	33335	-892	-3964	892	3prime_fragment	FALSE	canonical	0	0	junction_2	1.70579079087156	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTGTCAGTCTCAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	7990471	7956508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_7958163_7959499_7959623_7960453_7960616_7961724_7961755_7965396_7965477_7969175_7969285_7972351_7972583_7975089_7975234_7977293_7977363_7983789_7984240_7985219_7985332_7988487_7988589_7990222
ES.14260.3	chr17	-	5990	20	NIC	ENSMUSG00000071984.12	novel	6333	23	NA	NA	-21	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.80795410919133	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTTCTTTAGATGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	8046155	7957413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7958163_7959499_7959623_7960453_7960616_7961724_7961755_7965396_7965477_7969175_7969285_7972351_7972583_7975089_7975234_7977293_7977363_7983789_7984240_7985219_7985332_7988487_7988589_7990222_7992638_7994209_7994399_7997478_7997587_7998875_7999064_8001202_8001321_8003177_8003277_8007825_8008033_8045849
ES.14260.4	chr17	-	1733	12	NIC	ENSMUSG00000071984.12	novel	5845	20	NA	NA	-3959	-434	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.61091319515176	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCGCCTCTGCACTTTG	NA	False	NA	NA	False	TATAAA	-25	NA	7990466	7957834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_7958163_7959499_7959623_7960453_7960616_7961724_7961755_7965396_7965477_7969175_7969285_7972351_7972583_7975089_7975234_7977293_7977363_7985219_7985332_7988487_7988589_7990222
ES.14261.1	chr17	-	2906	1	Intergenic	novelGene_11944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCTTTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	8162657	8159751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8159800_8162700
ES.14262.1	chr17	+	1585	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	297	307	-45	13	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATCGTTCAAGGGC	NA	False	NA	NA	False	NA	NA	NA	8164781	8198349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ES.14262.2	chr17	+	1390	3	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	29615	345	-619	-25	3prime_fragment	FALSE	canonical	3	61	junction_2	6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	ACTAAA	-39	NA	8194099	8198311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8195040_8197549_8197637_8197948
ES.14263.1	chr17	+	173	1	Intergenic	novelGene_11945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATCACAAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	8329864	8330037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_8329900_8330000
ES.14264.1	chr17	-	1001	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	278	514	-34	-514	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	0	True	AAAAAG	-15	NA	8366651	8347421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.10	chr17	-	904	8	NIC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-3	-522	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	257.416124639638	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	-8	True	AAAAAG	-7	NA	8366620	8347429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8361349_8361403_8364373_8364435_8366425
ES.14264.11	chr17	-	3804	8	NIC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-31	-523	intron_retention	FALSE	canonical	0	0	junction_5	254.769203277742	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8366648	8347430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_8347719_8349056_8349132_8350874_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.12	chr17	-	2619	6	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	9981	-523	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	370.349888618857	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8356636	8347430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8354472_8354969_8355036
ES.14264.13	chr17	-	3982	10	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	1	-523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	358.782199484125	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8366616	8347430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8352237_8352461_8353735_8354969_8355036_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.14	chr17	-	1180	10	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	1	-523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	337.198406627461	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTGTTTGGCTTTTT	NA	False	NA	-9	True	AAAAAG	-6	NA	8366616	8347430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8352237_8352461_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.16	chr17	-	1965	7	NNC	ENSMUSG00000095687.3	novel	2456	10	NA	NA	81	-4056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	324.624269990194	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGCTTTCATAATACAG	NA	False	NA	NA	False	AATAAA	-14	NA	8366536	8350963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8352461_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.17	chr17	-	3625	2	NIC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-27	-14121	intron_retention	FALSE	canonical	3	722	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTCTTAACTACTGAGA	NA	False	NA	NA	False	NA	NA	NA	8366644	8361028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_8364435_8366425
ES.14264.2	chr17	-	2441	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	66	-514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	311.445420579594	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTCTTGTGTGT	NA	False	NA	0	True	AAAAAG	-15	NA	8366551	8347421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8352461_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.3	chr17	-	7439	7	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	1	-518	intron_retention	TRUE	non_canonical	0	0	junction_3	273.255680026357	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	-4	True	AAAAAG	-11	NA	8366616	8347425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8355009_8355080_8356791_8360427_8361403_8364373_8364435_8366425
ES.14264.4	chr17	-	3568	7	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	74	-518	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	376.994694922886	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	-4	True	AAAAAG	-11	NA	8366543	8347425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8354973_8355044_8356791_8361349_8361403_8366425
ES.14264.5	chr17	-	2734	9	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	-28	-522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	313.369964060055	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	-8	True	AAAAAG	-7	NA	8366645	8347429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8351988_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ES.14264.8	chr17	-	4620	8	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	1	-522	intron_retention	FALSE	non_canonical	0	0	junction_4	256.389770243889	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	-8	True	AAAAAG	-7	NA	8366616	8347429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8355009_8355080_8356791_8360427_8361403_8364373_8364435_8366425
ES.14264.9	chr17	-	6154	8	NNC	ENSMUSG00000095687.3	novel	1793	9	NA	NA	7	-522	intron_retention	FALSE	non_canonical	0	0	junction_4	327.42346044378	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	-8	True	AAAAAG	-7	NA	8366610	8347429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_8347719_8349056_8349132_8350874_8352461_8353735_8355009_8355080_8356791_8360427_8361403_8364373_8364435_8366425
ES.14265.1	chr17	-	2869	1	Intergenic	novelGene_11946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTCAACATATTGTAAC	726	False	NA	NA	False	NA	NA	NA	8383966	8381097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8381100_8384000
ES.14266.1	chr17	+	3127	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-44	-6	-5	6	multi-exon	TRUE	canonical	3	299	junction_6	38.250587420542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTGGTTTTTTTGTT	NA	False	NA	36	True	ATTAAA	-28	NA	8384327	8415313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.10	chr17	+	5330	11	ISM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-13	-1	7	1	intron_retention	FALSE	canonical	3	299	junction_6	39.4922777261581	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384358	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016
ES.14266.11	chr17	+	3171	14	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.10113638071	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384359	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394373_8401059_8401287_8403232_8403346_8405344_8405414_8406899_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.12	chr17	+	2673	11	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	-6	731	intron_retention	FALSE	canonical	3	299	junction_5	40.0356091498556	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAGAAATTGGACAT	NA	False	NA	NA	False	ATTAAA	-15	NA	8384365	8414508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.14	chr17	+	3389	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-3	-309	-3	-20	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGTACTCTCTCTCCA	NA	False	NA	NA	False	AGTAAA	-13	NA	8384368	8415616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.16	chr17	+	3230	14	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	150.250993163924	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384375	8415309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8406688_8406785_8406899_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.17	chr17	+	1999	11	NIC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	5	541	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	152.8234275234	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCTAATGTACACTGT	NA	False	NA	NA	False	AATAAA	-20	NA	8384376	8414318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.18	chr17	+	2080	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	10	987	10	543	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTAATGTACACTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	8384381	8414320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.2	chr17	+	1956	10	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	-2	531	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	117.112481543742	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCGTGGCAGATCTAA	NA	False	NA	NA	False	AATAAA	-10	NA	8384349	8414308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.21	chr17	+	3137	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	28	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	135.652410184592	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCCATTTTACAGTGT	NA	False	NA	23	True	AATAAA	-39	NA	8384399	8415300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8411536_8411632_8413352
ES.14266.22	chr17	+	3072	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	124.372731693442	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384399	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394373_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.23	chr17	+	2272	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	28	777	28	753	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCCATGGTGAGTGAGT	NA	False	NA	NA	False	ATTAAA	-37	NA	8384399	8414530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.24	chr17	+	2113	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	29	539	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	151.251698796704	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGATCTAATGTACACT	NA	False	NA	NA	False	AATAAA	-18	NA	8384400	8414316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401062_8401287_8403232_8403346_8405344_8405414_8406899_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.25	chr17	+	2898	10	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	29	-6	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	117.112481543742	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCATTTTACAGTGTT	NA	False	NA	24	True	AATAAA	-40	NA	8384400	8415301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.26	chr17	+	1379	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	68	2058	29	-199	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATACTTCCTATATG	NA	False	NA	NA	False	ATTAAA	-15	NA	8384400	8413578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.27	chr17	+	3108	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	133.48790519494	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384400	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8406899_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.29	chr17	+	3125	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	136.010492855024	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATTTTACAGTGTTG	NA	False	NA	25	True	AATAAA	-41	NA	8384400	8415302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8411300_8411383_8413352
ES.14266.3	chr17	+	1939	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-21	1159	-1	371	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCAGTGCTTTTATTT	NA	False	NA	NA	False	TTTAAA	-41	NA	8384350	8414148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.31	chr17	+	2993	11	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	110.957469329469	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384401	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.32	chr17	+	3191	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.570685196623	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCCATTTTACAGTGT	NA	False	NA	23	True	AATAAA	-39	NA	8384408	8415300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403170_8403346_8405344_8405414_8406688_8406785_8410229_8410270_8411016_8411114_8413352
ES.14266.33	chr17	+	1322	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	41	1714	41	-184	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGCCATTTCTAGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	8384412	8413593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.35	chr17	+	2404	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	42	631	42	-631	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGAGTCTGGCTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	8384413	8414676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.36	chr17	+	3041	12	NIC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	42	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	147.597901393847	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384413	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8384531_8384755_8384810_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.37	chr17	+	3117	12	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	45	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.481153450768	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384416	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388533_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.39	chr17	+	3094	11	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	236	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	108.982383897582	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384607	8415309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410203_8410270_8411016_8411114_8413352
ES.14266.4	chr17	+	9721	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	-1	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	125.371669668851	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACAGTGTTGGTTTTTT	NA	False	NA	32	True	ATTAAA	-24	NA	8384350	8415309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8396483_8396570_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.40	chr17	+	9401	10	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	4497	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	169.833324246719	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATCCTCCATTTTACA	NA	False	NA	19	True	AATAAA	-35	NA	8388868	8415296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8388976_8391759_8391841_8393840_8393944_8394350_8396538_8396626_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.41	chr17	+	5203	8	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	-3346	750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.250392757539	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGATCCATGGTGAGTG	NA	False	NA	NA	False	ATTAAA	-34	NA	8397732	8414527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8401287_8403232_8403346_8405344_8405414_8406688_8406785_8406899_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.42	chr17	+	3822	6	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	-1350	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.290419046295	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCATTTTACAGTGTT	NA	False	NA	24	True	AATAAA	-40	NA	8399728	8415301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8401283_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.43	chr17	+	4753	4	ISM	ENSMUSG00000069135.12	ENSMUST00000161898.2	855	5	-1282	467	-1282	-467	5prime_fragment	FALSE	canonical	3	323	junction_1	14.9740516301441	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTATACTGATTTTT	NA	False	NA	NA	False	TATAAA	-41	NA	8399796	8413310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8401287_8403232_8403346_8405344_8405414_8410229
ES.14266.44	chr17	+	9227	1	NIC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	5000	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTACAGTGTTGGTT	NA	False	NA	28	True	AATAAA	-44	NA	8406078	8415305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8406100_8415300
ES.14266.45	chr17	+	5511	3	ISM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	22440	-1	5733	1	3prime_fragment	FALSE	canonical	3	329	junction_2	15	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8406811	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8410270_8411016_8411114_8413352
ES.14266.46	chr17	+	4640	2	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	6557	737	intron_retention	FALSE	canonical	3	329	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGGACATCACTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	8407635	8414514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8411114_8413352
ES.14266.47	chr17	+	2760	2	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	9721	-27	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATGTTGGCCGGCAG	NA	False	NA	3	True	AATAAA	-19	NA	8410799	8415280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8411632_8413352
ES.14266.5	chr17	+	1227	11	ISM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	-21	4110	-1	-2580	5prime_fragment	FALSE	canonical	3	299	junction_6	39.4922777261581	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAGAAGTTGATGA	NA	False	NA	NA	False	AGTAAA	-10	NA	8384350	8411197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016
ES.14266.6	chr17	+	3150	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.4395216041	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCCATTTTACAGTGT	NA	False	NA	23	True	AATAAA	-39	NA	8384350	8415300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388003_8388063_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.7	chr17	+	3156	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	21	328	2	1	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACAGTGTTGGTTTTT	NA	False	NA	31	True	ATTAAA	-23	NA	8384353	8415308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14266.8	chr17	+	3652	12	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	3	543	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	104.033529242315	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTAATGTACACTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	8384354	8414320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8406959_8410229_8410270_8411016_8411114_8413352
ES.14266.9	chr17	+	2377	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	25	1103	6	756	multi-exon	FALSE	canonical	3	46	junction_7	116.477107908235	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGGTGAGTGAGTGAG	NA	False	NA	NA	False	ATTAAA	-40	NA	8384357	8414533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ES.14267.1	chr17	-	2473	1	Antisense	novelGene_ENSMUSG00000069135.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACAAGATTATAAGTCAGT	NA	False	NA	NA	False	AAAACA	-39	NA	8387209	8384736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_8384700_8387200
ES.14268.1	chr17	-	2751	2	Intergenic	novelGene_11947	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGCGTGTACTGATTG	NA	False	NA	NA	False	ATTAAA	-10	NA	8419711	8416894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8418743_8418808
ES.14269.1	chr17	+	4566	3	Intergenic	novelGene_11948	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	749	False	NA	NA	False	NA	NA	NA	8435023	8442056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_8436174_8438523_8441864_8441980
ES.1427.1	chr1	-	4300	1	Genic_Genomic	ENSMUSG00000062580.10	novel	NA	NA	NA	NA	11610	1283	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135225967	135221667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135221700_135226000
ES.1427.11	chr1	-	795	5	NIC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-37	268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1198.55545866681	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTTTGAAAGTTA	NA	False	NA	-19	True	AATAAA	-16	NA	135241466	135229285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135241431
ES.1427.12	chr1	-	2445	4	NNC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-32	268	intron_retention	FALSE	canonical	0	0	junction_2	1269.99002620756	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTTTGAAAGTTA	NA	False	NA	-19	True	AATAAA	-16	NA	135237609	135229285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135229742_135232167_135233992_135236872_135236937_135237508
ES.1427.15	chr1	-	851	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	0	6429	0	174	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACAGTGACACTCCAC	NA	False	NA	32	True	GATAAA	-13	NA	135241516	135229379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.16	chr1	-	833	6	NNC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	42	174	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	1064.87313798405	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACAGTGACACTCCAC	NA	False	NA	32	True	GATAAA	-13	NA	135241474	135229379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135229742_135232167_135232303_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.17	chr1	-	746	6	NNC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-36	129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1101.26407368987	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAGAATGTATATGAG	NA	False	NA	-13	True	AATAAA	-12	NA	135241465	135229424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241440
ES.1427.18	chr1	-	669	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	50	6561	-37	42	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGACTCAGAGGGTG	NA	False	NA	-48	True	CATAAA	-26	NA	135241466	135229511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.19	chr1	-	1761	1	NIC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-33	-2829	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135241462	135239701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135239700_135241500
ES.1427.2	chr1	-	7234	6	NNC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_2	1058.55399484391	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGCCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	135241466	135222950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135229742_135232167_135232279_135233822_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.4	chr1	-	5345	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	51	1884	-36	-1884	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAATCGCCACCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	135241465	135224834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.5	chr1	-	5227	5	NIC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	41	-1901	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1151.83231744035	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	135241475	135224851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135229742_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.6	chr1	-	1235	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	20	6025	20	578	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135241496	135228975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.1427.7	chr1	-	944	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	20	6316	20	287	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTGCCTTTCATACC	NA	False	NA	0	True	AATAAA	-35	NA	135241496	135229266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ES.14270.1	chr17	+	977	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-18	5	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	472.094858641307	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTATATATCTTGC	2103	False	NA	9	True	AATAAA	-23	NA	8502575	8516498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ES.14270.10	chr17	+	288	1	Intergenic	novelGene_11949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAAAATTTACTCAATT	705	False	NA	NA	False	NA	NA	NA	8507049	8507337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_8507000_8507300
ES.14270.11	chr17	+	181	1	Intergenic	novelGene_11950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAGA	706	False	NA	NA	False	NA	NA	NA	8507050	8507231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_8507000_8507200
ES.14270.12	chr17	+	8225	2	NNC	ENSMUSG00000023861.18	novel	670	3	NA	NA	4795	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	1736	False	NA	4	True	AATAAA	-18	NA	8508080	8516493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8509406_8509593
ES.14270.13	chr17	+	5024	3	FSM	ENSMUSG00000023861.18	ENSMUST00000137344.2	670	3	-3842	-512	-3842	1	multi-exon	FALSE	canonical	3	944	junction_1	57.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGACTATATATC	4753	False	NA	5	True	AATAAA	-19	NA	8511097	8516494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8515464_8515655_8515789_8515969
ES.14270.14	chr17	+	2503	2	NIC	ENSMUSG00000023861.18	novel	670	3	NA	NA	-1466	-7	intron_retention	FALSE	canonical	2	3	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGCTATTTGAGTG	7129	False	NA	-7	True	AATAAA	-7	NA	8513473	8516482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8515464_8515969
ES.14270.2	chr17	+	4000	1	NIC	ENSMUSG00000023861.18	novel	373	5	NA	NA	6	-5830	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGAAAGATATCGAAGG	2161	False	NA	NA	False	NA	NA	NA	8502633	8506633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8502600_8506600
ES.14270.3	chr17	+	984	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	-43	-386	13	0	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTGAGTGTGACTAT	2168	False	NA	0	True	AATAAA	-14	NA	8502640	8516489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
ES.14270.4	chr17	+	4391	2	FSM	ENSMUSG00000023861.18	ENSMUST00000147427.2	383	2	22	-4030	22	0	multi-exon	FALSE	canonical	3	543	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2177	False	NA	4	True	AATAAA	-18	NA	8502649	8516493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8502794_8512246
ES.14270.5	chr17	+	1048	5	NNC	ENSMUSG00000023861.18	novel	958	5	NA	NA	22	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	502.397937396244	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGACTATATATCTT	2177	False	NA	7	True	AATAAA	-21	NA	8502649	8516496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8502794_8514732_8514880_8515366_8515464_8515655_8515789_8515969
ES.14270.6	chr17	+	4013	4	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	27	0	intron_retention	FALSE	canonical	3	543	junction_1	221.179163173709	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2182	False	NA	4	True	AATAAA	-18	NA	8502654	8516493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8502794_8512246_8515464_8515655_8515789_8515969
ES.14270.7	chr17	+	883	4	NIC	ENSMUSG00000023861.18	novel	920	5	NA	NA	-12	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	474.440254990611	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAGTGTGACTATATA	2199	False	NA	3	True	AATAAA	-17	NA	8502671	8516492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8502794_8515358_8515464_8515655_8515789_8515969
ES.14270.8	chr17	+	1020	5	NIC	ENSMUSG00000023861.18	novel	958	5	NA	NA	-12	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	502.14888230484	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACTATATATCTTGC	2199	False	NA	9	True	AATAAA	-23	NA	8502671	8516498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8502794_8507431_8507571_8515366_8515464_8515655_8515789_8515969
ES.14270.9	chr17	+	1090	4	NIC	ENSMUSG00000023861.18	novel	961	6	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	473.033003311843	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTGAGTGTGACTAT	2704	False	NA	0	True	AATAAA	-14	NA	8503176	8516489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8503517_8515366_8515464_8515655_8515789_8515969
ES.14271.1	chr17	-	7821	3	Antisense	novelGene_ENSMUSG00000023861.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCCCTCTGTGCTGCAA	NA	False	NA	NA	False	NA	NA	NA	8511771	8503553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_8507034_8507243_8509411_8509597
ES.14272.1	chr17	-	158	1	Intergenic	novelGene_11951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	8525392	8525234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8525200_8525400
ES.14273.1	chr17	+	1066	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	-19	2	-19	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2904	False	NA	NA	False	AATAAA	-17	NA	8529914	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.10	chr17	+	4465	3	NIC	ENSMUSG00000073468.13	novel	810	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	190	junction_1	292.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2992	False	NA	NA	False	AATAAA	-17	NA	8530002	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8539431_8543296_8545786
ES.14273.11	chr17	+	1252	8	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	290.313975002294	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTCTGGATCAACT	3022	False	NA	NA	False	AATAAA	-16	NA	8530032	8546271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540973_8542108_8542168_8543265_8543296_8545786
ES.14273.12	chr17	+	187	1	Intergenic	novelGene_11952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAAGGCTGAGAT	3328	False	NA	NA	False	NA	NA	NA	8530338	8530525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_8530300_8530500
ES.14273.13	chr17	+	5770	5	NIC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	-2231	0	intron_retention	FALSE	canonical	3	775	junction_4	32.7032108515357	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	8319	False	NA	NA	False	AATAAA	-19	NA	8535329	8546274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8537763_8538250_8538334_8539431_8542168_8543265_8543296_8545786
ES.14273.14	chr17	+	2807	7	ISM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	5797	3	-1830	-1	3prime_fragment	FALSE	canonical	3	730	junction_4	41.479579982873	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTCTGGATCAACT	8720	False	NA	NA	False	AATAAA	-16	NA	8535730	8546271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.15	chr17	+	5671	4	NIC	ENSMUSG00000073468.13	novel	810	6	NA	NA	-1666	0	intron_retention	FALSE	canonical	3	775	junction_3	24.2624538467705	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	8884	False	NA	NA	False	AATAAA	-17	NA	8535894	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8539514_8540631_8542168_8543265_8543296_8545786
ES.14273.16	chr17	+	4069	6	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	-1665	936	intron_retention	FALSE	canonical	3	730	junction_3	44.5088755193838	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8885	False	NA	NA	False	NA	NA	NA	8535895	8547210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.17	chr17	+	1886	6	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	-426	-6	intron_retention	FALSE	canonical	3	730	junction_3	44.5088755193838	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAACATTTTCTGGAT	NA	False	NA	NA	False	AATAAA	-11	NA	8537134	8546266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.18	chr17	+	2241	5	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	343	0	intron_retention	FALSE	canonical	3	730	junction_2	47.310146903175	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	NA	False	NA	NA	False	AATAAA	-17	NA	8537903	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8538334_8539431_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.19	chr17	+	3807	1	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	-750	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	8542467	8546274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8542500_8546300
ES.14273.2	chr17	+	3547	6	NNC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	335.562453203573	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2930	False	NA	NA	False	AATAAA	-17	NA	8529940	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8530118_8537675_8537711_8538250_8538334_8539431_8542168_8543265_8543296_8545786
ES.14273.3	chr17	+	3599	6	NIC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	775	junction_5	42.1872018507983	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2930	False	NA	NA	False	AATAAA	-17	NA	8529940	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8542168_8543265_8543296_8545786
ES.14273.4	chr17	+	3427	4	NIC	ENSMUSG00000073468.13	novel	810	6	NA	NA	8	-1	intron_retention	FALSE	canonical	3	190	junction_1	287.490676177313	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTCTGGATCAACT	2931	False	NA	NA	False	AATAAA	-16	NA	8529941	8546271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8539431_8542168_8543265_8543296_8545786
ES.14273.5	chr17	+	866	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	-56	0	-9	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2934	False	NA	NA	False	AATAAA	-17	NA	8529944	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.6	chr17	+	656	2	NIC	ENSMUSG00000073468.13	novel	810	6	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2937	False	NA	NA	False	AATAAA	-17	NA	8529947	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8545786
ES.14273.7	chr17	+	2126	7	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	730	junction_4	51.8609251320834	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2962	False	NA	NA	False	AATAAA	-17	NA	8529972	8546272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8540668_8542108_8542168_8543265_8543296_8545786
ES.14273.9	chr17	+	2429	7	FSM	ENSMUSG00000073468.13	ENSMUST00000150728.8	2490	7	58	3	-9	-1	multi-exon	FALSE	canonical	3	775	junction_6	38.5947607267561	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTTTCTGGATCAACT	2981	False	NA	NA	False	AATAAA	-16	NA	8529991	8546271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8542168_8543265_8543296_8545786
ES.14274.1	chr17	-	6020	1	Antisense	novelGene_ENSMUSG00000073468.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAATAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	8540705	8534685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_8534700_8540700
ES.14275.1	chr17	+	3723	2	FSM	ENSMUSG00000055945.9	ENSMUST00000069742.8	3408	2	-345	30	-345	-29	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAATAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8558892	8562915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_8559539_8559838
ES.14276.1	chr17	-	389	2	Intergenic	novelGene_11953	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTTTGTACACTAGT	NA	False	NA	NA	False	NA	NA	NA	8608489	8599426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8599566_8608239
ES.14276.2	chr17	-	180	1	Intergenic	novelGene_11954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	8604129	8603949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8603900_8604100
ES.14277.1	chr17	+	1354	8	NNC	ENSMUSG00000058159.15	novel	1755	11	NA	NA	-5627	-4	intron_retention	FALSE	canonical	0	0	junction_1	0.494871659305393	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTGTTTAAAGATTCA	NA	False	NA	NA	False	AATAAA	-21	NA	8609833	8641556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8609875_8611042_8611144_8630651_8630734_8631882_8631990_8636012_8636074_8636825_8637053_8640439_8640555_8640936
ES.14277.2	chr17	+	3165	3	NNC	ENSMUSG00000058159.15	novel	1080	9	NA	NA	-51	-22825	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	8615409	8618735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8615476_8615592_8617187_8617230
ES.14278.1	chr17	-	2107	1	Intergenic	novelGene_11955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAATATAATATATCCA	NA	False	NA	NA	False	NA	NA	NA	8652953	8650846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8650800_8653000
ES.14279.1	chr17	+	2777	7	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-285	-8	intron_retention	FALSE	canonical	3	22	junction_4	8.29491142541954	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTGGTCTTTGTGGATT	NA	False	NA	2	True	AATAAA	-12	NA	8652969	8661320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
ES.14279.10	chr17	+	4569	4	NNC	ENSMUSG00000062327.11	novel	761	7	NA	NA	226	216	intron_retention	TRUE	canonical	0	0	junction_2	19.1369334592098	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	8654468	8660790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8655872_8655981_8656793_8656882_8658872_8660424
ES.14279.11	chr17	+	2585	5	NIC	ENSMUSG00000062327.11	novel	761	7	NA	NA	696	-9	intron_retention	FALSE	canonical	3	13	junction_3	11.5108644332213	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTGGTCTTTGTGGAT	NA	False	NA	1	True	AATAAA	-11	NA	8654938	8661319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8655078_8655809_8655872_8655981_8656044_8657444_8658872_8660424
ES.14279.12	chr17	+	3731	3	NNC	ENSMUSG00000062327.11	novel	761	7	NA	NA	1704	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	22	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGTCTTTGTGGATTA	NA	False	NA	3	True	AATAAA	-13	NA	8655946	8661321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8656760_8656850_8658872_8660424
ES.14279.13	chr17	+	2014	3	ISM	ENSMUSG00000062327.11	ENSMUST00000177118.2	761	7	1861	-216	1861	216	3prime_fragment	FALSE	canonical	3	42	junction_1	1	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAAAGC	NA	False	NA	NA	False	NA	NA	NA	8656103	8660790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_8657622_8658741_8658872_8660424
ES.14279.14	chr17	+	3066	1	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	4014	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTTTGTGGATTAT	NA	False	NA	4	True	AATAAA	-14	NA	8658256	8661322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8658300_8661300
ES.14279.3	chr17	+	4839	5	NNC	ENSMUSG00000062327.11	novel	761	7	NA	NA	-191	-7	intron_retention	TRUE	non_canonical	0	0	junction_2	17.6847391838274	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGTCTTTGTGGATTA	NA	False	NA	3	True	AATAAA	-13	NA	8653063	8661321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8654288_8654942_8656760_8656850_8657622_8658741_8658872_8660424
ES.14279.4	chr17	+	2155	7	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	259	intron_retention	FALSE	canonical	3	22	junction_4	8.29491142541954	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGAGCAATAATACAT	NA	False	NA	NA	False	AATAAA	-35	NA	8653104	8660833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
ES.14279.5	chr17	+	2193	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-150	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTTTGTGGATTAT	NA	False	NA	4	True	AATAAA	-14	NA	8653104	8661322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
ES.14279.6	chr17	+	2015	7	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-149	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	14.0445719051881	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTCTTTGTGGATTAT	NA	False	NA	4	True	AATAAA	-14	NA	8653105	8661322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8658741_8658872_8660424
ES.14279.7	chr17	+	1692	8	NNC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-149	244	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.8076097369714	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACTCCATTTTCAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	8653105	8660818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_8653573_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
ES.1428.1	chr1	+	2873	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCAGTGTGGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	135270019	135272892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135270000_135272900
ES.14280.1	chr17	-	135	1	Intergenic	novelGene_11956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8700668	8700533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8700500_8700700
ES.14281.1	chr17	-	170	1	Intergenic	novelGene_11957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATTAATGATTAT	NA	False	NA	NA	False	NA	NA	NA	8857904	8857734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_8857700_8857900
ES.14282.1	chr17	+	3560	22	NNC	ENSMUSG00000023868.18	novel	7769	22	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2.2284493251043	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCAGCAAGCAAATCTT	NA	False	NA	NA	False	AATAAA	-18	NA	9020507	9201230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172566_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193684_9195962_9196049_9197736_9197826_9200364
ES.14282.2	chr17	+	3148	22	FSM	ENSMUSG00000023868.18	ENSMUST00000089085.10	7769	22	379	4242	293	6	multi-exon	FALSE	canonical	1	1	junction_6	1.87476377952662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAAATCTTGTGGGTAA	NA	False	NA	NA	False	AATAAA	-26	NA	9020903	9201238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172568_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193667_9195967_9196049_9197736_9197826_9200364
ES.14283.1	chr17	-	174	1	Intergenic	novelGene_11958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGACCAGAGCAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	9036428	9036254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_9036300_9036400
ES.14284.1	chr17	+	1882	10	FSM	ENSMUSG00000023873.14	ENSMUST00000151609.2	1853	10	-30	1	-6	-1	multi-exon	FALSE	canonical	1	1	junction_6	3.01027048536535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTTGCGTGCTCACTG	NA	False	NA	NA	False	AATAAA	-17	NA	9207158	9227149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_9207254_9210877_9211585_9212427_9212551_9214029_9214090_9215810_9215936_9219959_9220019_9220601_9220778_9224023_9224078_9224524_9224587_9226728
ES.14285.1	chr17	+	5849	1	Antisense	novelGene_ENSMUSG00000117341.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTATCATCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	9929722	9935571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_9929700_9935600
ES.14286.1	chr17	-	3945	4	Fusion	ENSMUSG00000117341.2_ENSMUSG00000046173.4	novel	588	4	NA	NA	-6	-17	multi-exon	FALSE	canonical	1	2	junction_1	4.02768199119819	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTAAGTTTAATTT	NA	False	NA	NA	False	AATAAA	-23	NA	9945296	9885440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_9888971_9924446_9924688_9941118_9941218_9945221
ES.14286.2	chr17	-	4050	5	Fusion	ENSMUSG00000117341.2_ENSMUSG00000046173.4	novel	588	4	NA	NA	-640	-18	multi-exon	FALSE	canonical	0	0	junction_1	5.2618912949623	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTTAAGTTTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	9945930	9885441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_9888971_9924583_9924688_9941118_9941218_9945221_9945460_9945850
ES.14286.3	chr17	-	4034	5	Fusion	ENSMUSG00000117341.2_ENSMUSG00000046173.4	novel	588	4	NA	NA	24	-18	multi-exon	FALSE	canonical	0	0	junction_1	5.2618912949623	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTTAAGTTTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	9945258	9885441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_9888971_9905486_9905615_9924446_9924688_9941118_9941218_9945221
ES.14286.4	chr17	-	4678	3	FSM	ENSMUSG00000117341.2	ENSMUST00000233459.2	585	3	-6	-4087	-6	4087	multi-exon	FALSE	canonical	3	10	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGTGAAATTCTCTAGG	NA	False	NA	NA	False	NA	NA	NA	9945296	9920183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_9924688_9941118_9941218_9945221
ES.14286.5	chr17	-	2261	3	FSM	ENSMUSG00000117341.2	ENSMUST00000233459.2	585	3	7	-1683	-1	1683	multi-exon	FALSE	canonical	3	10	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAGAACTAACCTGTC	NA	False	NA	NA	False	ATTAAA	-11	NA	9945283	9922587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_9924688_9941118_9941218_9945221
ES.14286.6	chr17	-	3016	4	NNC	ENSMUSG00000117341.2	novel	585	3	NA	NA	-2	-13472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTGACTAGTACTCCA	NA	False	NA	NA	False	NA	NA	NA	9945284	9937938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_9940285_9941118_9941218_9944489_9944998_9945221
ES.14287.1	chr17	+	2394	4	Intergenic	novelGene_11959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTCTGGGTTGTTGTTG	NA	False	NA	NA	False	TATAAA	-17	NA	10225427	10245099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10225543_10229812_10230261_10232374_10232419_10243312
ES.14288.1	chr17	+	177	1	Intergenic	novelGene_11960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGGGACTCT	NA	False	NA	NA	False	NA	NA	NA	10420254	10420431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10420300_10420400
ES.14289.1	chr17	+	746	1	Antisense	novelGene_ENSMUSG00000062078.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAACCCAAAC	NA	False	NA	NA	False	NA	NA	NA	10430654	10431400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_10430700_10431400
ES.14289.2	chr17	+	4859	1	Antisense	novelGene_ENSMUSG00000062078.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAACCACCGCAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	10430869	10435728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_10430900_10435700
ES.1429.1	chr1	-	176	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTGGACAGAG	6920	False	NA	NA	False	NA	NA	NA	135271024	135270848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135270800_135271000
ES.14290.1	chr17	+	3124	1	Intergenic	novelGene_11961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTAGAAATTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	10446957	10450081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10447000_10450100
ES.14291.1	chr17	+	1978	1	Intergenic	novelGene_11962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAGGTAAATAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	10482466	10484444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10482500_10484400
ES.14292.1	chr17	+	138	1	Intergenic	novelGene_11963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAAATAA	1017	False	NA	NA	False	NA	NA	NA	10497454	10497592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10497500_10497600
ES.14293.1	chr17	+	9445	1	Intergenic	novelGene_11964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTGACTTCTATGAGAA	9062	False	NA	NA	False	NA	NA	NA	10505499	10514944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10505500_10514900
ES.14294.1	chr17	+	174	1	Intergenic	novelGene_11965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTACTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	10526377	10526551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10526400_10526600
ES.14295.1	chr17	+	338	1	Antisense	novelGene_ENSMUSG00000062078.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTCCTGTTGCTTCACT	NA	False	NA	NA	False	NA	NA	NA	10538311	10538649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_10538300_10538600
ES.14296.1	chr17	-	8620	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	113	-186	94	186	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGGTTATTGTAAGT	NA	False	NA	NA	False	TTTAAA	-3	NA	10538196	10421343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.102	chr17	-	5318	8	NNC	ENSMUSG00000062078.16	novel	5428	7	NA	NA	57	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	477.779899800171	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAAACTTTGTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	10538233	10429118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537875_10537926
ES.14296.104	chr17	-	5507	8	NNC	ENSMUSG00000062078.16	novel	5428	7	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	562.569288249574	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAAACTTTGTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	10538282	10429118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10433124_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10502861_10502974_10537660
ES.14296.106	chr17	-	5238	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	-113	303	-94	-303	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGGTATCAGTTAGAA	NA	False	NA	NA	False	AATAAA	-28	NA	10538403	10429420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.107	chr17	-	3324	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	22	2082	22	1140	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATCAGTGATACTTA	NA	False	NA	NA	False	AATAAA	-11	NA	10538268	10431199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.108	chr17	-	1701	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	432	3295	432	-73	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTATGTATGTTTTCTA	NA	False	NA	NA	False	GATAAA	-16	NA	10537858	10432412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.109	chr17	-	2894	1	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-5465	-2735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1539	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTATGTGATTAATGCA	NA	False	NA	NA	False	NA	NA	NA	10437968	10435074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10435100_10438000
ES.14296.11	chr17	-	7180	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	31	-1293	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGCTGCATCTTCTC	NA	False	NA	-4	True	AATAAA	-13	NA	10538259	10422822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.110	chr17	-	1958	1	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	9	-104003	mono-exon	FALSE	NA	NA	NA	NA	NA	1444	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGCTCTTAAATTGAG	NA	False	NA	NA	False	AAAAAG	-4	NA	10538300	10536342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10536300_10538300
ES.14296.12	chr17	-	6185	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	73	1704	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTGGTTAAATTTATG	NA	False	NA	NA	False	ATTAAA	-35	NA	10538217	10423775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.13	chr17	-	6245	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	46	2256	27	1694	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGAAAGCTGTTTGGT	NA	False	NA	NA	False	ATTAAA	-25	NA	10538263	10423785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.16	chr17	-	4694	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	1	3852	1	98	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGATAACATAGTGTGA	NA	False	NA	NA	False	AATAAA	-36	NA	10538308	10425381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.18	chr17	-	4624	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-5	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.592655859938	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGAAGAACGTGATCAG	NA	False	NA	NA	False	AATAAA	-20	NA	10538314	10425397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10426889_10426948_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.19	chr17	-	4164	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	470	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	494.138897477217	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10537820	10425479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10521833_10521890_10537660
ES.14296.2	chr17	-	7705	6	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	8918	22	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	446.963354202557	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTTGCAGGACTGAGT	NA	False	NA	3	True	ATTAAA	-43	NA	10492944	10421507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875
ES.14296.20	chr17	-	4578	8	NNC	ENSMUSG00000062078.16	novel	5832	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538314	10425479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.21	chr17	-	4377	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	58	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	438.207998557762	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538232	10425479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10537660
ES.14296.24	chr17	-	4410	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	52	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	389.592655859938	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGACTATGTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538238	10425481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537819_10537932
ES.14296.25	chr17	-	4314	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.592655859938	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGACTATGTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538234	10425481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10425845_10426050_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.27	chr17	-	7320	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1001	junction_1	104.785495179438	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	10538309	10425482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.28	chr17	-	4450	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	433.639026790204	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	10538282	10425482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10501767_10501911_10537660
ES.14296.3	chr17	-	8975	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	-409	-19	65	19	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTCTTGCAGGACTG	NA	False	NA	0	True	ATTAAA	-40	NA	10538718	10421510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.30	chr17	-	3563	3	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	599.5	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	10538272	10425482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428291_10501767_10501911_10537660
ES.14296.31	chr17	-	4560	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	415.305542796567	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	10538282	10425482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435095_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.32	chr17	-	4154	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	389.592655859938	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGACTATGTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	10538294	10425482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537823_10538247
ES.14296.33	chr17	-	5446	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	384	-4	intron_retention	FALSE	canonical	3	1001	junction_1	106.729278498868	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTCTGGACTATGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	10537906	10425483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10432363_10435088_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.34	chr17	-	4498	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	446.350167718376	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTCTGGACTATGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	10538289	10425483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.35	chr17	-	4348	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	85	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	389.592655859938	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTCTGGACTATGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	10538205	10425483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537940_10538080
ES.14296.36	chr17	-	4452	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	8	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	491.429277083692	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTCTGGACTATGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	10538282	10425483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10538102_10538191
ES.14296.4	chr17	-	8296	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	1	250	1	-250	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAGAGTTTGTATTTCT	NA	False	NA	0	True	AATAAA	-22	NA	10538308	10421779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.45	chr17	-	4589	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	60	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	507.869815996186	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTCTGGACTATGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	10538230	10425484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10499425_10499502_10501767_10501911_10537660
ES.14296.46	chr17	-	4618	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	495.189610149486	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTCTGGACTATGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	10538268	10425484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10490967_10491035_10492875_10492993_10501767_10501911_10537660
ES.14296.47	chr17	-	4462	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.592655859938	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTCTGGACTATGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	10538273	10425484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428010_10428103_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.49	chr17	-	4229	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	491.429277083692	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTCTGGACTATGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	10538272	10425484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537875_10538176
ES.14296.50	chr17	-	4410	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	410.550612660066	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538272	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10492875_10492993_10501767_10501911_10537660
ES.14296.51	chr17	-	4106	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	491.429277083692	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538272	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537831_10538254
ES.14296.52	chr17	-	4725	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	415.305542796567	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538308	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10493128_10501767_10501911_10537660
ES.14296.54	chr17	-	4587	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	544.391618575268	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538273	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10521833_10521890_10537660
ES.14296.55	chr17	-	4397	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	508.512877849495	1765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538257	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537778
ES.14296.56	chr17	-	3731	3	NNC	ENSMUSG00000062078.16	novel	5832	8	NA	NA	60	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	500.5	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTCTGGACTATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	10538230	10425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432374_10537660
ES.14296.58	chr17	-	4229	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.592655859938	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAACTCTGGACTATGT	NA	False	NA	NA	False	AATAAA	-16	NA	10538262	10425486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10427785_10428098_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.6	chr17	-	7678	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	37	832	18	-832	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTACAGCTCTTTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	10538272	10422361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.66	chr17	-	4824	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	-401	4124	73	-174	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGGTGTCTTGTCTTT	NA	False	NA	22	True	NA	NA	NA	10538710	10425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.68	chr17	-	4384	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-5	-194	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGCAGTACTTTATT	NA	False	NA	2	True	NA	NA	NA	10538314	10425673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.69	chr17	-	4521	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-9	-197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.369000362358	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGTTTTGCAGTACTTT	NA	False	NA	-1	True	NA	NA	NA	10538299	10425676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436860_10457817_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.7	chr17	-	7665	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	-407	1289	67	-1289	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCATCTTCTCAAGC	NA	False	NA	0	True	AATAAA	-17	NA	10538716	10422818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.71	chr17	-	4260	7	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-201	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	554.497570378406	1763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAATTGTTTTGCAGTA	NA	False	NA	-5	True	NA	NA	NA	10538272	10425680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.73	chr17	-	2844	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	30	-205	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	388.950832368308	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCCAATTGTTTTGC	NA	False	NA	-9	True	NA	NA	NA	10538260	10425684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10426744_10428242_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.75	chr17	-	6353	8	NIC	ENSMUSG00000062078.16	novel	5832	8	NA	NA	60	-206	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	408.843815296407	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGCCAATTGTTTTG	NA	False	NA	-10	True	NA	NA	NA	10538230	10425685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10434404_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.76	chr17	-	4347	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	415.305542796567	1763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGCCAATTGTTTTG	NA	False	NA	-10	True	NA	NA	NA	10538272	10425685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432356_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.78	chr17	-	4314	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	575.454283721184	1763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGCCAATTGTTTT	NA	False	NA	-11	True	NA	NA	NA	10538272	10425686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428563_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501894_10537660
ES.14296.79	chr17	-	4038	10	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	20	-228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	483.458936425708	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCACAATTTTGATAA	NA	False	NA	-32	True	NA	NA	NA	10538270	10425707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10426952_10427185_10427797_10427854_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.80	chr17	-	4225	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	39	4283	20	-333	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGTTACAAGTTTATA	NA	False	NA	NA	False	NA	NA	NA	10538270	10425812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.81	chr17	-	4477	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	-395	4465	79	-515	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTTCCTGACAGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	10538704	10425994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.82	chr17	-	4061	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	-5	-517	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTTTTCCTGACAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	10538314	10425996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.84	chr17	-	3817	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	79	4651	60	-701	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTAGACGTGTGACG	NA	False	NA	NA	False	AAGAAA	-11	NA	10538230	10426180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.85	chr17	-	3745	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	20	4782	1	-832	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGGTGATAGTTTTAAA	NA	False	NA	4	True	AATAAA	-19	NA	10538289	10426311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.86	chr17	-	3699	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	18	-837	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTTGAGGTGATAGTT	NA	False	NA	-1	True	AATAAA	-14	NA	10538272	10426316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.87	chr17	-	3741	9	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	57	-874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	487.798049914101	1743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGTTGGTTGAA	NA	False	NA	-1	True	AATATA	-22	NA	10538233	10426353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10438492_10438587_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.88	chr17	-	3022	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	-407	5932	67	560	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGAGCCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-33	NA	10538716	10427461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.89	chr17	-	2571	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	1	560	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	1690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGAGCCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-33	NA	10538289	10427461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.9	chr17	-	6600	7	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	495	-1290	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	438.207998557762	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGCATCTTCTCAAG	NA	False	NA	-1	True	AATAAA	-16	NA	10537795	10422819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10537660
ES.14296.90	chr17	-	7066	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	18	-1656	18	560	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGAGCCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-33	NA	10538272	10427461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.91	chr17	-	6737	7	FSM	ENSMUSG00000062078.16	ENSMUST00000042296.9	6737	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	441.583388375162	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538309	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10434404_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.92	chr17	-	5864	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	-426	-10	67	0	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538716	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.93	chr17	-	5834	7	NNC	ENSMUSG00000062078.16	novel	6737	7	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	487.526979310433	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538710	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10433124_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.94	chr17	-	4590	7	NNC	ENSMUSG00000062078.16	novel	6737	7	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	420.762271227933	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538227	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.95	chr17	-	4659	7	ISM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	37	7578	18	0	5prime_fragment	FALSE	canonical	3	1078	junction_1	88.7494913913439	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538272	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ES.14296.97	chr17	-	5080	8	NNC	ENSMUSG00000062078.16	novel	6737	7	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	477.779899800171	1617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538282	10429107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660_10537875_10538224
ES.14297.1	chr17	+	2469	1	Intergenic	novelGene_11966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTCTGTCCCCATCT	NA	False	NA	NA	False	AATAAA	-13	NA	10554207	10556676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10554200_10556700
ES.14298.1	chr17	+	319	1	Intergenic	novelGene_11967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATCTTCAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	10571226	10571545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10571200_10571500
ES.14298.2	chr17	+	1715	4	Intergenic	novelGene_11968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTGTTTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	10571313	10594030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10571512_10574033_10574228_10591652_10591765_10592819
ES.14298.3	chr17	+	170	1	Intergenic	novelGene_11969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGGAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	10571568	10571738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10571600_10571700
ES.14299.1	chr17	+	1941	1	Intergenic	novelGene_11970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCTGTACTATGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	10648724	10650665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_10648700_10650700
ES.143.1	chr1	-	199	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAAGTTTTCACATAG	NA	False	NA	NA	False	NA	NA	NA	16133236	16133037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16133000_16133200
ES.1430.1	chr1	-	226	1	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTTTTAGGATAGAGAG	2851	False	NA	NA	False	AATAAA	-32	NA	135281229	135281003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135281000_135281200
ES.14300.1	chr17	+	239	1	ISM	ENSMUSG00000089633.3	ENSMUST00000160763.2	1145	2	17298	371	8677	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCTCATTTTGTGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	10692442	10692681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_10692400_10692700
ES.14301.1	chr17	+	157	1	Intergenic	novelGene_11971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	AATACA	-3	NA	12068215	12068372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12068200_12068400
ES.14302.1	chr17	+	2280	3	NNC	ENSMUSG00000023826.17	novel	3202	12	NA	NA	14620	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCAAAAGCGTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	12263422	12282245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12263767_12269512_12269631_12280427
ES.14302.2	chr17	+	2064	3	NNC	ENSMUSG00000023826.17	novel	3202	12	NA	NA	14777	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGTGTTTGTACCTAT	NA	False	NA	NA	False	AATAAA	-26	NA	12263579	12282253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12263700_12269512_12269631_12280427
ES.14303.1	chr17	+	2029	10	NNC	ENSMUSG00000023827.9	novel	967	7	NA	NA	-11573	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.96238485329	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	7134	False	NA	25	True	ATTAAA	-16	NA	12326017	12438529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12326167_12336861_12336962_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.10	chr17	+	3979	8	ISM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	23	5	-22	-5	intron_retention	FALSE	canonical	3	218	junction_3	28.2257661995387	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGGCAAGTGTTTA	NA	False	NA	23	True	ATTAAA	-14	NA	12338193	12438527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580
ES.14303.11	chr17	+	1709	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	91.6245667083332	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338202	12438528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12338303_12370578_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.12	chr17	+	507	2	ISM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	41	67538	-4	12452	5prime_fragment	FALSE	canonical	3	227	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12338211	12370994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_12338303_12370578
ES.14303.13	chr17	+	1847	9	NNC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	-2	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	87.1427528541531	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGAAAAAGAATTAAA	NA	False	NA	-10	True	ACTAAA	-11	NA	12338213	12438494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12338316_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.14	chr17	+	3348	2	NNC	ENSMUSG00000023827.9	novel	967	7	NA	NA	-4003	12475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCAGTGAGAGGTGCC	NA	False	NA	NA	False	NA	NA	NA	12366655	12371017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12369218_12370231
ES.14303.15	chr17	+	1691	8	NNC	ENSMUSG00000023827.9	novel	695	3	NA	NA	31617	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	89.8518054285806	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTGGCAAGTGTTT	5640	False	NA	22	True	ATTAAA	-13	NA	12402275	12438526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12402448_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.17	chr17	+	1549	8	NNC	ENSMUSG00000023827.9	novel	695	3	NA	NA	-19794	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.698764391123	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	3301	False	NA	25	True	ATTAAA	-16	NA	12414217	12438529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12414279_12417638_12417809_12429097_12429260_12429525_12429680_12432375_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.18	chr17	+	1914	7	NNC	ENSMUSG00000023827.9	novel	695	3	NA	NA	-16117	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	98.4913983835926	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	6978	False	NA	25	True	ATTAAA	-16	NA	12417894	12438529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12418457_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.19	chr17	+	5367	3	FSM	ENSMUSG00000023827.9	ENSMUST00000167905.2	695	3	-4284	-388	-4284	-4	multi-exon	FALSE	canonical	3	245	junction_2	6	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	8797	False	NA	24	True	ATTAAA	-15	NA	12429727	12438528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_12434239_12435580_12435780_12437871
ES.14303.2	chr17	+	1867	9	NNC	ENSMUSG00000023827.9	novel	967	7	NA	NA	-11238	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.4596335459965	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTGGCAAGTGTTT	7469	False	NA	22	True	ATTAAA	-13	NA	12326352	12438526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12326443_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.3	chr17	+	1812	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	105	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	NA	False	NA	25	True	ATTAAA	-16	NA	12337695	12438529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.4	chr17	+	1946	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	-29	-2	-29	2	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGTGTTTACACAAAT	NA	False	NA	30	True	ATTAAA	-21	NA	12338141	12438534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.5	chr17	+	1868	9	NNC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	85.7274022702193	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGGCAAGTGTTTA	NA	False	NA	23	True	ATTAAA	-14	NA	12338178	12438527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432375_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.6	chr17	+	4565	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	8	-4	intron_retention	FALSE	canonical	3	218	junction_3	28.2734461129527	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338178	12438528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.7	chr17	+	5907	7	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	9	-3	intron_retention	FALSE	canonical	3	218	junction_3	30.4069619221213	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGCAAGTGTTTACA	NA	False	NA	25	True	ATTAAA	-16	NA	12338179	12438529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12432445_12434162_12435780_12437871
ES.14303.8	chr17	+	1740	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	93.4432054943602	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCAAGTGTTTAC	NA	False	NA	24	True	ATTAAA	-15	NA	12338179	12438528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12338303_12370578_12370837_12417638_12417809_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14303.9	chr17	+	1636	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	16	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.5282938299877	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGTGGCAAGTGTTTA	NA	False	NA	23	True	ATTAAA	-14	NA	12338186	12438527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12338303_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ES.14304.1	chr17	-	201	1	Intergenic	novelGene_11972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTTTGAAAGTTCA	NA	False	NA	NA	False	CATAAA	-33	NA	12380917	12380716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_12380700_12380900
ES.14305.1	chr17	+	763	1	Antisense	novelGene_ENSMUSG00000014426.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAACAAACCAAAA	NA	False	NA	NA	False	AATACA	-5	NA	12494500	12495263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_12494500_12495300
ES.14306.1	chr17	+	2064	1	NIC	ENSMUSG00000097350.3	novel	3174	2	NA	NA	11	-6323	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	12537750	12539814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_12537800_12539800
ES.14307.1	chr17	-	5506	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	-65	0	-65	0	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537748	12446507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.10	chr17	-	5361	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	73.4585279286468	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGTCAGCGTCTGTTAC	NA	False	NA	-4	True	AATAAA	-18	NA	12537681	12446512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474073_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496806_12496999_12537380
ES.14307.12	chr17	-	3099	16	NIC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	-5809	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	73.1707288166214	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGTCAGCGTCTGTTAC	NA	False	NA	-4	True	AATAAA	-18	NA	12490682	12446512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12489749
ES.14307.16	chr17	-	5244	26	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	64.8729959228029	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGTCAGCGTCTGTTAC	NA	False	NA	-4	True	AATAAA	-18	NA	12537664	12446512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461711_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12537384
ES.14307.17	chr17	-	6405	26	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	6	-7	intron_retention	FALSE	canonical	2	131	junction_24	37.058958431127	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGAAGTCAGCGTCTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	12537667	12446514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.18	chr17	-	5239	26	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	52.5607305885297	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGAAGTCAGCGTCTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	12537679	12446514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12537384
ES.14307.19	chr17	-	5000	25	NIC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	39	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_24	61.8118645344259	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGAAGTCAGCGTCTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	12537596	12446514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12537384
ES.14307.23	chr17	-	3887	9	NIC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	-11722	-8	intron_retention	FALSE	canonical	3	182	junction_8	32.2216445111046	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12460825	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856
ES.14307.25	chr17	-	5355	25	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	-6127	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.3670303704034	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12491000	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12461867_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749
ES.14307.26	chr17	-	5053	7	NIC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	-9663	-8	intron_retention	FALSE	canonical	3	194	junction_5	31.9409176797133	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12458766	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265
ES.14307.27	chr17	-	5440	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	52.6559813018797	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12537672	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461711_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.28	chr17	-	6897	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	51.7271088210258	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12537679	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12495339_12496999_12537384
ES.14307.29	chr17	-	5501	28	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	63.9316979497924	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12537664	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12498598_12498686_12537384
ES.14307.3	chr17	-	5843	28	Fusion	ENSMUSG00000014426.10_ENSMUSG00000117337.2	novel	5441	27	NA	NA	-36242	0	multi-exon	FALSE	canonical	0	0	junction_26	69.6032850083286	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12575857	12446507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384_12538100_12539421_12539533_12575826
ES.14307.32	chr17	-	5262	27	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	64	-8	combination_of_known_junctions	FALSE	canonical	1	5	junction_26	52.5498354621648	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGAAGTCAGCGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	12537214	12446515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537086
ES.14307.33	chr17	-	5253	26	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	8	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.8180492422984	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCGAAGTCAGCGTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	12537665	12446516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12446998_12448394_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475652_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.34	chr17	-	4066	23	NIC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	-5621	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.6849327640143	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCGAAGTCAGCGTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	12490494	12446516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749
ES.14307.36	chr17	-	5010	25	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	11	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	62.9313448661847	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	False	NA	-10	True	AATAAA	-12	NA	12537662	12446518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12489749_12491108_12496807_12496999_12537384
ES.14307.38	chr17	-	5162	26	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	15	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	54.0199962976674	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	False	NA	-10	True	AATAAA	-12	NA	12537658	12446518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12489749_12491108_12496807_12496999_12537384
ES.14307.39	chr17	-	5351	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	53.2555522565849	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	False	NA	-10	True	AATAAA	-12	NA	12537664	12446518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480218_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.4	chr17	-	5569	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	74.0831533445186	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGCGTCTGTTACTGG	NA	False	NA	-1	True	AATAAA	-21	NA	12537696	12446509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451409_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458477_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483020_12489749_12491108_12496807_12496999_12537384
ES.14307.40	chr17	-	5366	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	51.7271088210258	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	False	NA	-10	True	AATAAA	-12	NA	12537667	12446518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491052_12496799_12496999_12537384
ES.14307.42	chr17	-	5105	16	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	0	7228	intron_retention	FALSE	non_canonical	0	0	junction_14	73.5088807937895	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGGGTACTGGAGAA	NA	False	NA	NA	False	AATAAA	-29	NA	12537683	12460855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474073_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496808_12496999_12537384
ES.14307.43	chr17	-	5149	16	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	11	7220	intron_retention	FALSE	canonical	0	0	junction_7	59.2957184139144	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGCTTGTTTTGGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	12537662	12460863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475483_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.44	chr17	-	5186	16	ISM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	-61	14359	-13	7217	5prime_fragment	FALSE	canonical	2	131	junction_14	34.8237466871865	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTCCTGCTTGTTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	12537696	12460866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.45	chr17	-	4048	9	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	2	7217	intron_retention	FALSE	canonical	0	0	junction_5	103.017898930234	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTCCTGCTTGTTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	12537671	12460866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12489749_12491108_12494734_12494888_12496807_12496999_12537384
ES.14307.46	chr17	-	4470	17	ISM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	9	14359	-1	7217	5prime_fragment	FALSE	canonical	2	131	junction_15	34.3828968202215	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTCCTGCTTGTTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	12537674	12460866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.47	chr17	-	3383	14	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	0	7191	intron_retention	FALSE	canonical	0	0	junction_13	62.214460162043	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAATAAAATAAAATATTA	NA	False	NA	NA	False	NA	NA	NA	12484873	12460892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12484789
ES.14307.48	chr17	-	5647	15	ISM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	12	17579	2	3997	5prime_fragment	FALSE	canonical	2	131	junction_13	35.1916763117737	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGTTCTTAGCTGGGCG	NA	False	NA	NA	False	AGTAAA	-31	NA	12537671	12464086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.49	chr17	-	3725	15	ISM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	16	19497	6	2079	5prime_fragment	FALSE	canonical	2	131	junction_13	35.1916763117737	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGAGCTGGTTTCTG	NA	False	NA	NA	False	ATTAAA	-27	NA	12537667	12466004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.5	chr17	-	4910	10	ISM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	75398	2	-13134	-2	3prime_fragment	FALSE	canonical	3	182	junction_9	30.4257850360796	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGCGTCTGTTACTGG	NA	False	NA	-1	True	AATAAA	-21	NA	12462237	12446509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856
ES.14307.50	chr17	-	3539	15	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	-5	1959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	74.937559041525	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTTTTTAGGGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	12537678	12466124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474073_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496806_12496999_12537384
ES.14307.51	chr17	-	4071	14	ISM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	7	19843	-3	1733	5prime_fragment	FALSE	canonical	2	131	junction_12	35.2467212793863	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTGCTTTCAAATACT	NA	False	NA	NA	False	ACTAAA	-18	NA	12537676	12466350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.52	chr17	-	4090	13	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	-16	956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	61.2975439058441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCCAACTTATGCTG	NA	False	NA	NA	False	AATAAA	-32	NA	12537699	12467127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496806_12496999_12537384
ES.14307.53	chr17	-	4704	3	ISM	ENSMUSG00000014426.10	ENSMUST00000232931.2	3576	12	15	18795	5	4129	5prime_fragment	FALSE	canonical	2	131	junction_1	28	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGTTGTCTTTATTTA	NA	False	NA	NA	False	TTTAAA	-19	NA	12537668	12486878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12491108_12496807_12496999_12537384
ES.14307.54	chr17	-	3595	3	Antisense	novelGene_ENSMUSG00000117197.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTTGAAGCTATCTGA	NA	False	NA	NA	False	AATGAA	-40	NA	12579171	12575216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_12576236_12576326_12578529_12578797
ES.14307.55	chr17	-	1084	2	Intergenic	novelGene_11973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACGTTCCTGTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	12579171	12577818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_12578529_12578797
ES.14307.6	chr17	-	5403	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	51.7962125365947	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGCGTCTGTTACTGG	NA	False	NA	-1	True	AATAAA	-21	NA	12537680	12446509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473916_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.7	chr17	-	5419	27	NNC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	52.4913771447865	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCAGCGTCTGTTACTG	NA	False	NA	-2	True	AATAAA	-20	NA	12537670	12446510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474145_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ES.14307.8	chr17	-	3817	24	NNC	ENSMUSG00000014426.10	novel	5237	26	NA	NA	-5269	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	63.1477398727753	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCAGCGTCTGTTACTG	NA	False	NA	-2	True	AATAAA	-20	NA	12490142	12446510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479486_12480130_12480278_12482792_12483036_12489749
ES.14308.1	chr17	+	177	2	Antisense	novelGene_ENSMUSG00000089817.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	3781	False	NA	NA	False	NA	NA	NA	12913768	13067694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_12913894_13067642
ES.14308.10	chr17	+	178	1	Intergenic	novelGene_11981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	6411	False	NA	NA	False	NA	NA	NA	13067516	13067694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13067500_13067700
ES.14308.2	chr17	+	177	2	Antisense	novelGene_ENSMUSG00000089817.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	3783	False	NA	NA	False	NA	NA	NA	12913770	13067694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_12913884_13067630
ES.14308.3	chr17	+	2560	1	Intergenic	novelGene_11974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	12963049	12965609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12963000_12965600
ES.14308.4	chr17	+	5402	2	Intergenic	novelGene_11975	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTACCTAGTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	12977178	12982934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12980920_12981273
ES.14308.5	chr17	+	2291	2	Intergenic	novelGene_11976	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-41	NA	12979870	12982904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12981334_12982076
ES.14308.6	chr17	+	3066	1	Intergenic	novelGene_11979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTACCTAGTCCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	12979870	12982936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12979900_12982900
ES.14308.7	chr17	+	2673	2	Intergenic	novelGene_11977	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-41	NA	12979870	12982904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12980920_12981280
ES.14308.8	chr17	+	6661	1	Intergenic	novelGene_11980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACTCTAGGAGACTAGA	NA	False	NA	NA	False	NA	NA	NA	12979870	12986531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12979900_12986500
ES.14308.9	chr17	+	2179	2	Intergenic	novelGene_11978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTACCTAGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	12979870	12982933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_12980484_12981367
ES.14309.1	chr17	-	8963	48	FSM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	-68	-8	-68	8	multi-exon	TRUE	canonical	3	127	junction_32	38.5858675109275	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACCCCACCCCCAACCC	5550	False	NA	8	True	AATAAA	-27	NA	12988619	12901284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.14309.10	chr17	-	9607	47	NIC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	-30	-5	intron_retention	FALSE	canonical	3	127	junction_31	38.8930541322657	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	5588	False	NA	-5	True	AATAAA	-14	NA	12988581	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.14309.13	chr17	-	8974	48	NNC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	51.8571356418382	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	5592	False	NA	-5	True	AATAAA	-14	NA	12988577	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916900_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945082_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.14309.21	chr17	-	8950	48	NNC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	-57	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.0809442517685	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGATAAATTATTAAC	5561	False	NA	-24	True	NA	NA	NA	12988608	12901316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911035_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.14309.22	chr17	-	7718	47	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	20949	836	2085	-836	3prime_fragment	FALSE	canonical	3	127	junction_32	38.431462575473	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTCTTTTGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	12967602	12902128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530
ES.14309.23	chr17	-	4645	27	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	60089	1232	-8296	-1232	3prime_fragment	FALSE	canonical	3	128	junction_23	34.3443448571761	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGCGTCTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	12928462	12902524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265
ES.14309.24	chr17	-	2107	4	ISM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	79954	2421	11569	-2421	intron_retention	FALSE	canonical	3	230	junction_1	8.73053390247253	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGCCGGTCAGAGGA	8214	False	NA	NA	False	GATAAA	-16	NA	12908597	12903713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_12904095_12904477_12904622_12905508_12905696_12907202
ES.14309.3	chr17	-	4493	18	NNC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	764	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	58.8756827625909	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	NA	False	NA	-5	True	AATAAA	-14	NA	12919402	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912899_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228
ES.14309.6	chr17	-	10350	47	NIC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	39	-5	intron_retention	FALSE	canonical	3	127	junction_31	38.1522730086661	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	5657	False	NA	-5	True	AATAAA	-14	NA	12988512	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.14309.8	chr17	-	4045	15	NNC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	2967	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	62.955969388396	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	NA	False	NA	-5	True	AATAAA	-14	NA	12917199	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12910998_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972
ES.14309.9	chr17	-	8816	48	NNC	ENSMUSG00000023830.15	novel	8887	48	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	46.2086907023313	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGTAAGTGACTCACC	5594	False	NA	-5	True	AATAAA	-14	NA	12988575	12901297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918156_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ES.1431.1	chr1	-	2990	1	FSM	ENSMUSG00002075633.1	ENSMUST00020182903.1	106	1	-2885	1	-2885	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATACAATACAATAAA	NA	False	NA	NA	False	NA	NA	NA	135284445	135281455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135281500_135284400
ES.14310.1	chr17	+	181	1	Intergenic	novelGene_11982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACTTCAGAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	13075867	13076048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13075900_13076000
ES.14311.1	chr17	-	1748	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	20	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	43.2176518577625	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCCAGTGCATTCCTT	2994	False	NA	-1	True	GATAAA	-27	NA	13128813	13107608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118593_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124697_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.11	chr17	-	5217	18	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	23	0	intron_retention	FALSE	canonical	1	3	junction_17	43.4742098308322	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTACATGGCCAGTG	2997	False	NA	-9	True	GATAAA	-19	NA	13128810	13107616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113461_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128737
ES.14311.12	chr17	-	2857	7	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	1121	0	intron_retention	FALSE	canonical	3	14	junction_4	60.6620877392865	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTACATGGCCAGTG	NA	False	NA	-9	True	GATAAA	-19	NA	13113350	13107616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13109887_13109943_13111022_13111066_13111206
ES.14311.13	chr17	-	1711	18	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	44.6156985110983	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTGTACATGGCCAGT	2998	False	NA	-10	True	GATAAA	-18	NA	13128809	13107617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128737
ES.14311.15	chr17	-	8267	15	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	13	-1	intron_retention	TRUE	non_canonical	0	0	junction_6	49.1777803650455	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTGTACATGGCCAGT	2987	False	NA	-10	True	GATAAA	-18	NA	13128820	13107617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13117234_13117626_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128737
ES.14311.16	chr17	-	4510	2	NIC	ENSMUSG00000073460.6	novel	522	7	NA	NA	-483	-1	intron_retention	FALSE	canonical	3	138	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTGTACATGGCCAGT	NA	False	NA	-10	True	GATAAA	-18	NA	13112393	13107617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13109342_13109607
ES.14311.17	chr17	-	1892	19	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	32.7693491988105	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTGTACATGGCCAGT	2981	False	NA	-10	True	GATAAA	-18	NA	13128826	13107617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13107857_13108869_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.18	chr17	-	3771	18	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	23	-1	intron_retention	FALSE	canonical	0	0	junction_15	44.7593333716604	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTGTACATGGCCAGT	2997	False	NA	-10	True	GATAAA	-18	NA	13128810	13107617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113499_13114398_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125554_13127939_13128014_13128348_13128407_13128722
ES.14311.19	chr17	-	6137	16	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_15	35.5546527663164	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCTGTACATGGCCAG	2966	False	NA	-11	True	GATAAA	-17	NA	13128841	13107618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111261_13111645_13111711_13113246_13113303_13114398_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13128014_13128348_13128407_13128717
ES.14311.2	chr17	-	1838	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	261	-7	-23	7	multi-exon	FALSE	canonical	3	109	junction_10	13.5984067694222	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCCAGTGCATTCCTT	2951	False	NA	-1	True	GATAAA	-27	NA	13128856	13107608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.20	chr17	-	1994	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.3552242932696	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCTGTACATGGCCAG	2987	False	NA	-11	True	GATAAA	-17	NA	13128820	13107618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111443_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.21	chr17	-	1836	20	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	38.4821432129291	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCTGTACATGGCCAG	2998	False	NA	-11	True	GATAAA	-17	NA	13128809	13107618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13109887_13109943_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.22	chr17	-	10161	9	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	7115	-14	intron_retention	FALSE	non_canonical	0	0	junction_7	46.4715975085858	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTGTGTCGGACCTCT	NA	False	NA	-23	True	GATAAA	-5	NA	13121665	13107630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13117234_13117626_13118564_13118727
ES.14311.23	chr17	-	2242	7	NIC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	128	-17	intron_retention	FALSE	canonical	3	116	junction_6	10.5422430672456	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTGTGTGTCGGACC	NA	False	NA	-26	True	GATAAA	-2	NA	13114343	13107633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111711_13113246
ES.14311.25	chr17	-	3534	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-9	-19	intron_retention	FALSE	canonical	2	3	junction_5	41.4535289417969	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCTTGTGTGTCGGA	2965	False	NA	-28	True	NA	NA	NA	13128842	13107635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13109887_13109962_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.26	chr17	-	2135	18	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-14	-21	intron_retention	FALSE	canonical	3	9	junction_9	32.1135528525981	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAACCCTTGTGTGTCG	3013	False	NA	-30	True	NA	NA	NA	13128794	13107637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111711_13113246_13113303_13114398_13114485_13116147_13116221_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.27	chr17	-	1698	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	12	-21	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	32.3806450343335	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAACCCTTGTGTGTCG	2986	False	NA	-30	True	NA	NA	NA	13128821	13107637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124697_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.28	chr17	-	1711	18	NIC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-8	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	44.0290875857452	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAACCCTTGTGTGTCG	2966	False	NA	-30	True	NA	NA	NA	13128841	13107637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13107857_13108869_13109062_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.29	chr17	-	1795	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	-10	-22	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	32.7770244734529	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAAACCCTTGTGTGTC	3017	False	NA	-31	True	NA	NA	NA	13128790	13107638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118617_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.3	chr17	-	4430	17	NIC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	13	0	intron_retention	FALSE	canonical	3	9	junction_8	32.9089653438087	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2987	False	NA	-8	True	GATAAA	-20	NA	13128820	13107615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13114485_13116147_13116221_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.31	chr17	-	1410	1	NIC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	4055	-4302	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7082	False	NA	NA	False	GGGGCT	-32	NA	13124725	13123315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13123300_13124700
ES.14311.32	chr17	-	1665	1	NIC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	20	-8082	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTAGTGTCCTAAATAA	3047	False	NA	NA	False	NA	NA	NA	13128760	13127095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13127100_13128800
ES.14311.33	chr17	-	1090	3	ISM	ENSMUSG00000073460.6	ENSMUST00000232982.2	620	8	-56	8082	-3	-8082	5prime_fragment	FALSE	canonical	3	130	junction_1	2	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTAGTGTCCTAAATAA	2971	False	NA	NA	False	NA	NA	NA	13128836	13127095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13128014_13128348_13128407_13128722
ES.14311.4	chr17	-	5686	17	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_7	45.3286178230707	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2989	False	NA	-8	True	GATAAA	-20	NA	13128818	13107615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13112115_13116221_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ES.14311.6	chr17	-	2373	2	ISM	ENSMUSG00000073460.6	ENSMUST00000233189.2	522	7	4378	-1434	-1032	0	intron_retention	FALSE	canonical	3	144	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTACATGGCCAGTG	NA	False	NA	-9	True	GATAAA	-19	NA	13110093	13107616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13109062_13109165
ES.14311.7	chr17	-	3995	10	NNC	ENSMUSG00000073460.6	novel	2004	19	NA	NA	-4306	0	intron_retention	FALSE	canonical	2	3	junction_9	43.0916336298462	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTACATGGCCAGTG	NA	False	NA	-9	True	GATAAA	-19	NA	13118777	13107616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13116218_13118419_13118617_13118727
ES.14311.9	chr17	-	1779	19	NNC	ENSMUSG00000073460.6	novel	2092	19	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	32.7598821204108	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTACATGGCCAGTG	2987	False	NA	-9	True	GATAAA	-19	NA	13128820	13107616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128737
ES.14312.1	chr17	+	2588	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	-104	-38	-51	38	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTCCTGCTGTCTT	NA	False	NA	6	True	NA	NA	NA	13135164	13143992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.11	chr17	+	2680	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	16	-100	intron_retention	FALSE	canonical	3	3235	junction_7	186.904280314818	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGTTTCTCTGTG	NA	False	NA	7	True	AATAAA	-15	NA	13135284	13143854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.12	chr17	+	1929	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	16	18700	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	997.264174295524	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTCCTCAGTTTGGT	NA	False	NA	9	True	ATTAAA	-23	NA	13135284	13162654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143330_13162530
ES.14312.13	chr17	+	1850	11	NNC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1082.78774004881	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135284	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135534_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.14	chr17	+	2860	10	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_4	1118.70451973215	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135284	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13138336_13138701_13138813_13139682_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.16	chr17	+	4095	8	NIC	ENSMUSG00000068039.14	novel	3419	10	NA	NA	17	0	intron_retention	FALSE	canonical	3	3235	junction_4	185.364505771736	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135285	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.17	chr17	+	653	3	FSM	ENSMUSG00000068039.14	ENSMUST00000143961.2	614	3	-40	1	17	-1	multi-exon	FALSE	canonical	3	3521	junction_2	31.5	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCGTGAATTTGGAGCC	NA	False	NA	NA	False	AATAAA	-24	NA	13135285	13137265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929
ES.14312.19	chr17	+	3086	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	3235	junction_7	188.129636155498	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135285	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.2	chr17	+	2057	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	-101	490	-48	15	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGTCCTCTGGTTTCC	NA	False	NA	20	True	ATTAAA	-35	NA	13135167	13143464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.20	chr17	+	3555	11	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_5	1066.6731880009	1387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTCCCAAGTGCTGG	NA	False	NA	16	True	NA	NA	NA	13135285	13143950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13138336_13138701_13138813_13139162_13139345_13139675_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.21	chr17	+	2344	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	71	-513	18	2	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAAGTGCTGGAATTTA	NA	False	NA	22	True	NA	NA	NA	13135286	13143956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.22	chr17	+	1732	10	NIC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	131	junction_2	1427.3647392189	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135287	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136929_13137059_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.24	chr17	+	2956	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	19	-529	19	529	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGATTAAAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	13135287	13144483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.25	chr17	+	5419	6	NIC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	20	0	intron_retention	FALSE	canonical	3	3235	junction_2	218.185792388047	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135288	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.26	chr17	+	3094	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	3235	junction_7	171.986045945594	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135288	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.28	chr17	+	887	7	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	23	4272	23	-71	5prime_fragment	FALSE	canonical	3	3365	junction_4	137.232973038147	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAATGAAGCTTGG	NA	False	NA	NA	False	NA	NA	NA	13135291	13139682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626
ES.14312.29	chr17	+	2837	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	23	901	intron_retention	FALSE	non_canonical	0	0	junction_12	997.264174295524	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAACTGTCTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	13135291	13144855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13144313_13144799
ES.14312.3	chr17	+	1877	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	46	-21	-7	15	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGTCCTCTGGTTTCC	NA	False	NA	20	True	ATTAAA	-35	NA	13135261	13143464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.30	chr17	+	2305	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	46	95	-11	-95	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTCTCTGTGTGGCT	NA	False	NA	12	True	AATAAA	-20	NA	13135314	13143859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.31	chr17	+	5559	4	NIC	ENSMUSG00000068039.14	novel	3419	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	3404	junction_3	74.5788173679363	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCACCTGGGTTCCTGTC	NA	False	NA	-3	True	ATTAAA	-12	NA	13135319	13143441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13139754_13140989
ES.14312.35	chr17	+	1879	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	-1	18694	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	997.264174295524	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTCCTGTCCTCAG	NA	False	NA	3	True	ATTAAA	-17	NA	13135327	13162648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143396_13162597
ES.14312.37	chr17	+	1888	12	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1039.68335135001	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135330	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141635_13142104_13142298_13142416_13142581_13143146
ES.14312.38	chr17	+	2221	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	3235	junction_7	186.904280314818	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCACCTGGGTTCCTGTC	NA	False	NA	-3	True	ATTAAA	-12	NA	13135330	13143441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.4	chr17	+	1789	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	11	646	11	-135	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATAAACACGGAAGTTATG	NA	False	NA	NA	False	GATAAA	-22	NA	13135279	13143308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.40	chr17	+	2239	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	3235	junction_7	177.633583536447	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135330	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.41	chr17	+	2352	10	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	2	4	intron_retention	FALSE	canonical	3	3235	junction_7	179.566143802221	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTCAGTTTGGTC	NA	False	NA	9	True	ATTAAA	-24	NA	13135330	13143453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142581_13143146
ES.14312.42	chr17	+	3854	9	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	2	40	intron_retention	FALSE	canonical	3	3235	junction_6	201.921395597396	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTGTTGCACTGATT	NA	False	NA	45	True	NA	NA	NA	13135330	13143489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139754_13140989_13141166_13141495_13142298_13142416_13142581_13143146
ES.14312.43	chr17	+	3832	10	FSM	ENSMUSG00000068039.14	ENSMUST00000129632.8	3419	10	-4	-409	3	-96	multi-exon	FALSE	canonical	3	3235	junction_6	171.650232942271	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTTTCTCTGTGTGGC	NA	False	NA	11	True	AATAAA	-19	NA	13135331	13143858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.44	chr17	+	1870	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	-3	18693	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	997.264174295524	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTTCCTGTCCTCA	NA	False	NA	2	True	ATTAAA	-16	NA	13135332	13162647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143321_13162525
ES.14312.47	chr17	+	1808	11	NNC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1391.95235550647	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135338	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143117
ES.14312.49	chr17	+	3401	10	FSM	ENSMUSG00000068039.14	ENSMUST00000129632.8	3419	10	13	5	-13	1	multi-exon	FALSE	canonical	3	3235	junction_6	171.650232942271	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGGTTCCTGTCCTC	NA	False	NA	0	True	ATTAAA	-15	NA	13135348	13143444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13135517_13136684_13136771_13136929_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.5	chr17	+	4263	7	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	11	-14	intron_retention	FALSE	canonical	3	3235	junction_4	189.965567055366	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGCAAGCTGACCACC	NA	False	NA	-15	True	NA	NA	NA	13135279	13143429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13141166_13141495_13141620_13142104_13142581_13143146
ES.14312.51	chr17	+	1774	11	NNC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1412.99732837681	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCACCTGGGTTCCTGTC	NA	False	NA	-3	True	ATTAAA	-12	NA	13135350	13143441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136929_13137059_13138237_13138336_13138692_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.52	chr17	+	2727	9	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	3235	junction_5	194.350480768636	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135351	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13135517_13136684_13137059_13138237_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.53	chr17	+	4266	9	NNC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_3	1533.88395910512	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135392	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13138336_13138701_13138813_13139162_13139345_13139675_13139754_13140991_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.54	chr17	+	1740	12	NNC	ENSMUSG00000068039.14	novel	768	4	NA	NA	557	-2	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_1	1034.27167650789	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCACCTGGGTTCCTGTC	NA	False	NA	-3	True	ATTAAA	-12	NA	13135918	13143441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135974_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ES.14312.55	chr17	+	5009	3	NIC	ENSMUSG00000068039.14	novel	1902	11	NA	NA	1271	0	intron_retention	FALSE	canonical	3	3404	junction_1	187	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13136632	13143443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13139754_13140989_13142581_13143146
ES.14312.56	chr17	+	1628	11	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	1374	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1070.93594579695	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCACCTGGGTTCCTGTC	NA	False	NA	-3	True	ATTAAA	-12	NA	13136735	13143441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142422_13142581_13143146
ES.14312.57	chr17	+	3063	4	NIC	ENSMUSG00000068039.14	novel	3419	10	NA	NA	-157	39	intron_retention	FALSE	canonical	3	3404	junction_2	159.520810206345	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTCCTGCTGTCTTT	NA	False	NA	7	True	NA	NA	NA	13138846	13143993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13139345_13139626_13139754_13140989_13142581_13143146
ES.14312.59	chr17	+	178	1	Intergenic	novelGene_11984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGGGAGTT	NA	False	NA	NA	False	NA	NA	NA	13152323	13152501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13152300_13152500
ES.14312.6	chr17	+	5119	7	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	11	-2	intron_retention	FALSE	canonical	3	3235	junction_5	137.327366375226	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTCCTGTCCTCAGT	NA	False	NA	3	True	ATTAAA	-18	NA	13135279	13143447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104
ES.14312.8	chr17	+	1922	13	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	14	18694	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	997.264174295524	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTCCTGTCCTCAG	NA	False	NA	3	True	ATTAAA	-17	NA	13135282	13162648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146_13143348_13162551
ES.14313.1	chr17	-	1684	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	-463	-2	-463	2	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTACTGTGTTGTGCT	NA	False	NA	-7	True	ATTAAA	-20	NA	13135695	13130233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ES.14313.2	chr17	-	2623	3	NIC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	-8	2	intron_retention	FALSE	canonical	3	1056	junction_2	5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTACTGTGTTGTGCT	NA	False	NA	-7	True	ATTAAA	-20	NA	13134998	13130233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13130637_13132656_13134712_13134833
ES.14313.3	chr17	-	969	4	NNC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	500.176857610275	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTACTGTGTTGTGCT	NA	False	NA	-7	True	ATTAAA	-20	NA	13134996	13130233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13130637_13132656_13132889_13134540_13134712_13134833
ES.14313.4	chr17	-	1007	4	NNC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	476.277463483443	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13134989	13130235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13130637_13132625_13132889_13134524_13134712_13134833
ES.14313.5	chr17	-	3689	1	NIC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	584	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAACCCTTACTGTGTT	NA	False	NA	-12	True	ATTAAA	-15	NA	13133927	13130238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13130200_13133900
ES.14313.7	chr17	-	837	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	250	132	8	-132	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTGTGTGCTTGTGT	NA	False	NA	-1	True	TTTAAA	-15	NA	13134982	13130367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ES.14314.1	chr17	-	352	1	Antisense	novelGene_ENSMUSG00000068039.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAACAAAACAAAA	NA	False	NA	NA	False	AATAGA	-27	NA	13138086	13137734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_13137700_13138100
ES.14315.1	chr17	-	657	3	ISM	ENSMUSG00000062480.13	ENSMUST00000160921.2	716	4	1151	-287	1151	287	3prime_fragment	FALSE	canonical	3	83	junction_1	22	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCGTGTTTATCGTCT	NA	False	NA	NA	False	NA	NA	NA	13145418	13143325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13143718_13144154_13144266_13145264
ES.14316.1	chr17	-	179	1	Intergenic	novelGene_11983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	13149487	13149308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13149300_13149500
ES.14317.1	chr17	-	2233	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	14	3	-13	-3	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACCTGCTGGGAGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	13179620	13161779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.11	chr17	-	5655	8	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	10	-4	intron_retention	FALSE	canonical	3	922	junction_2	81.5552898721012	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCTTGTCAGTG	NA	False	NA	-4	True	NA	NA	NA	13179597	13161928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.13	chr17	-	1616	6	NIC	ENSMUSG00000023832.15	novel	1931	8	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	392.76384762348	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGCTTCTTGTCAGT	NA	False	NA	-5	True	NA	NA	NA	13179597	13161929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13178881_13179017_13179495
ES.14317.14	chr17	-	1871	9	NNC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	351.827283620813	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGCTTCTTGTCAGT	NA	False	NA	-5	True	NA	NA	NA	13179595	13161929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175153_13178933_13179017_13179495
ES.14317.17	chr17	-	6590	7	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	15	-5	intron_retention	FALSE	canonical	3	922	junction_2	86.5775182519496	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGCTTCTTGTCAGT	NA	False	NA	-5	True	NA	NA	NA	13179592	13161929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13166367_13167400_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.18	chr17	-	1490	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	15	745	-12	-192	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTATCGTCTTTACTT	NA	False	NA	NA	False	NA	NA	NA	13179619	13162521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.19	chr17	-	1215	8	ISM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	15	1387	-12	126	5prime_fragment	FALSE	canonical	3	922	junction_1	88.9797041751772	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGGGTTTTTTGTTGC	NA	False	NA	NA	False	GATAAA	-18	NA	13179619	13163163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.2	chr17	-	2118	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	-13	145	-13	3	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTCAGTGAGTTTGA	NA	False	NA	3	True	NA	NA	NA	13179647	13161921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.20	chr17	-	1977	6	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	1	1939	1	-979	5prime_fragment	FALSE	canonical	3	965	junction_2	76.9066967175161	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAACTACAGATATC	NA	False	NA	NA	False	NA	NA	NA	13179257	13164268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
ES.14317.21	chr17	-	6186	2	NNC	ENSMUSG00000023832.15	novel	827	7	NA	NA	1673	-1213	intron_retention	TRUE	non_canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCTACATACATGAGG	NA	False	NA	NA	False	NA	NA	NA	13177585	13164502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13168663_13175559
ES.14317.22	chr17	-	2574	6	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	8	-1213	intron_retention	FALSE	canonical	3	965	junction_1	86.064162111764	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCTACATACATGAGG	NA	False	NA	NA	False	NA	NA	NA	13179626	13164502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.24	chr17	-	1612	7	ISM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	-8	2763	-8	-1250	5prime_fragment	FALSE	canonical	3	965	junction_2	78.864158878134	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13179642	13164539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.25	chr17	-	1318	7	ISM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	37	3012	10	-1499	5prime_fragment	FALSE	canonical	3	965	junction_2	78.864158878134	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAATTGAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	13179597	13164788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.26	chr17	-	4159	1	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	16	-12143	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGGGCCTTGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	13179591	13175432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13175400_13179600
ES.14317.3	chr17	-	1992	7	NIC	ENSMUSG00000023832.15	novel	1800	8	NA	NA	28	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	383.574742825089	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTTCTTGTCAGTGA	NA	False	NA	-3	True	NA	NA	NA	13179230	13161927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13178881
ES.14317.5	chr17	-	3848	6	NNC	ENSMUSG00000023832.15	novel	1800	8	NA	NA	5187	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	390.541675112913	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTTCTTGTCAGTGA	NA	False	NA	-3	True	NA	NA	NA	13170045	13161927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13168665_13168842
ES.14317.6	chr17	-	3025	8	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	922	junction_2	96.197288773369	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTTCTTGTCAGTGA	NA	False	NA	-3	True	NA	NA	NA	13179619	13161927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.7	chr17	-	2514	9	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_3	352.553697151228	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTTCTTGTCAGTGA	NA	False	NA	-3	True	NA	NA	NA	13179597	13161927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13165755_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ES.14317.9	chr17	-	2227	9	NIC	ENSMUSG00000023832.15	novel	2250	9	NA	NA	27	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	458.082143288734	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTTCTTGTCAGTGA	NA	False	NA	-3	True	NA	NA	NA	13179231	13161927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13162920_13163286_13163398_13165147_13165303_13165702_13165755_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
ES.14318.1	chr17	+	5246	2	Genic_Genomic	ENSMUSG00000089695.3	novel	423	1	NA	NA	-887	4147	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAACCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	13180767	13186224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_13183204_13183414
ES.14319.1	chr17	+	4253	1	Intergenic	novelGene_11986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCGGAGTCATAAATGC	NA	False	NA	NA	False	NA	NA	NA	13194797	13199050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13194800_13199000
ES.1432.1	chr1	+	2038	1	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135285929	135287967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135285900_135288000
ES.14320.1	chr17	+	216	1	Intergenic	novelGene_11988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGCCTAGCAAACACAG	NA	False	NA	NA	False	NA	NA	NA	13208675	13208891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13208700_13208900
ES.14321.1	chr17	+	1489	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-14264	-263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.28978982437	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGTGAATTGCTC	NA	False	NA	45	True	ATTAAA	-33	NA	13211468	13234240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13211786_13214042_13214179_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.10	chr17	+	2429	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-273	intron_retention	FALSE	canonical	2	15	junction_2	1390.89708012491	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCGCATACTCTGTG	NA	False	NA	35	True	ATTAAA	-23	NA	13225732	13234230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227662_13229406_13229524_13232319_13232500_13233912
ES.14321.11	chr17	+	5697	2	FSM	ENSMUSG00000006818.6	ENSMUST00000233278.2	334	2	-3494	-1869	0	-278	multi-exon	FALSE	canonical	3	3324	junction_1	0	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGAACAGCGCATACT	NA	False	NA	30	True	ATTAAA	-18	NA	13225732	13234225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13229524_13232319
ES.14321.12	chr17	+	1229	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1532.52225831217	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGAACAGCGCATACT	NA	False	NA	30	True	ATTAAA	-18	NA	13225732	13234225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226330_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.13	chr17	+	3930	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-2018	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1304.96022927904	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCAGTGGTATGCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	13225732	13237003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225864_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.14	chr17	+	3739	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-2194	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTTGTTGATTTTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	13225732	13236827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.15	chr17	+	7889	4	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1574.78442969189	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13225732	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226319_13227274_13229406_13229524_13232319
ES.14321.16	chr17	+	2051	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	-971	4781	0	-263	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGTGAATTGCTC	NA	False	NA	45	True	ATTAAA	-33	NA	13225732	13234240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.17	chr17	+	5936	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTGAATACCTAACG	NA	False	NA	NA	False	NA	NA	NA	13225732	13239024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.18	chr17	+	4058	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-2017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.75847919871	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	13225732	13237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226280_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.19	chr17	+	8841	3	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	239	0	intron_retention	FALSE	canonical	3	3082	junction_2	121	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13225971	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13229524_13232319_13232500_13233912
ES.14321.2	chr17	+	3345	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-1638	-282	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	1298.57728302939	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTGAGAACAGCGCA	NA	False	NA	26	True	ATTAAA	-14	NA	13224094	13234221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.20	chr17	+	1370	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	-26	4517	-26	1	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTGGACATCACCTAG	NA	False	NA	32	True	ATTAAA	-29	NA	13226677	13234504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.21	chr17	+	3872	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	-26	2015	-26	-2015	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTATGCTGTCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	13226677	13237006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.22	chr17	+	5812	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1305.35916896462	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226685	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912_13238404_13238470
ES.14321.24	chr17	+	5844	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	17	0	17	0	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226720	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.25	chr17	+	3635	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	18	2208	18	-2208	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTTTGAGGAATATT	NA	False	NA	NA	False	ATTAAA	-24	NA	13226721	13236813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.26	chr17	+	3349	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	19	2493	19	2025	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTACAATTCAGACAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	13226722	13236528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.28	chr17	+	789	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	35	5037	-7	-519	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATCTGAAAGCTATTTGG	NA	False	NA	NA	False	TATAAA	-14	NA	13226738	13233984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.29	chr17	+	3797	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	62	-2015	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	1528.06316623365	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTATGCTGTCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	13226808	13237006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13227605_13227662_13229406_13229524_13232319_13232500_13233912
ES.14321.3	chr17	+	1309	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-15	-263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.75847919871	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGTGAATTGCTC	NA	False	NA	45	True	ATTAAA	-33	NA	13225717	13234240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226280_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.30	chr17	+	4632	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	113	1116	-66	-1116	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACAGTGTTCTGACATC	NA	False	NA	NA	False	AATAAA	-15	NA	13226816	13237905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.31	chr17	+	1100	4	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-60	-7	combination_of_known_splicesites	FALSE	canonical	3	346	junction_2	1332.66950141436	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCTATTTAGTGGACA	NA	False	NA	24	True	ATTAAA	-21	NA	13226822	13234496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13226956_13227070_13227274_13232319_13232500_13233912
ES.14321.32	chr17	+	4891	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-56	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1305.35916896462	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	13226826	13239011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912_13234918_13235754
ES.14321.33	chr17	+	3165	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-56	-2017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1576.86605645502	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	13226826	13237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229528_13232322_13232500_13233912_13235206_13235762
ES.14321.34	chr17	+	3163	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-56	-2017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1305.35916896462	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	13226826	13237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912_13235199_13235756
ES.14321.36	chr17	+	2240	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-39	-2017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1305.35916896462	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	13226843	13237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912_13234504_13235967
ES.14321.37	chr17	+	2057	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	151	3653	-28	865	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGCATGTCTGTGTAT	NA	False	NA	NA	False	TTTAAA	-17	NA	13226854	13235368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.38	chr17	+	2681	15	Fusion	ENSMUSG00000055602.18_ENSMUSG00000006818.6	novel	2588	11	NA	NA	-28	114	multi-exon	FALSE	canonical	0	0	junction_5	1359.08923585628	878	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGGCCACACCTCCT	NA	False	NA	NA	False	AGTAAA	-27	NA	13226854	13301224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13280732_13280860_13281175_13281328_13281736_13281953_13285100_13285260_13286532_13286633_13288555_13288660_13289732_13289832_13292361_13292503_13294492_13294578_13298957_13299076_13300445
ES.14321.39	chr17	+	3574	4	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-27	-2018	combination_of_known_splicesites	FALSE	canonical	3	346	junction_2	1332.66950141436	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCAGTGGTATGCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	13226855	13237003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13226956_13227070_13227274_13232319_13232500_13233912
ES.14321.4	chr17	+	1174	6	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-263	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1304.96022927904	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGTGAATTGCTC	NA	False	NA	45	True	ATTAAA	-33	NA	13225730	13234240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226727_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.41	chr17	+	3766	6	Fusion	ENSMUSG00000117278.2_ENSMUSG00000006818.6	novel	5861	5	NA	NA	-17	-2	multi-exon	FALSE	canonical	0	0	junction_4	1623.03217466568	888	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTGGGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	13226865	13554102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13391222_13391308_13551011
ES.14321.43	chr17	+	2691	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-15	6140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1434.74464191368	874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCGTAGTTGTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	13226867	13245161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13243058
ES.14321.44	chr17	+	890	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-14	-282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1397.37924344109	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTGAGAACAGCGCA	NA	False	NA	26	True	ATTAAA	-14	NA	13226868	13234221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227268_13229406_13229524_13232319_13232500_13233912
ES.14321.45	chr17	+	889	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-13	-279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1402.80547029872	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGAACAGCGCATAC	NA	False	NA	29	True	ATTAAA	-17	NA	13226869	13234224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232328_13232500_13233912
ES.14321.46	chr17	+	3689	5	NIC	ENSMUSG00000006818.6	novel	4057	7	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	1433.8788956882	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTGGGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	13226870	13258948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13255844
ES.14321.47	chr17	+	893	5	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-12	-279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1413.16194666429	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGAACAGCGCATAC	NA	False	NA	29	True	ATTAAA	-17	NA	13226870	13234224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13226950_13227068_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.48	chr17	+	7107	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	167	0	-12	0	intron_retention	FALSE	canonical	3	3256	junction_1	42.0502345085283	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226870	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319
ES.14321.49	chr17	+	5577	4	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	346	junction_2	1332.66950141436	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226870	13239021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13226956_13227070_13227274_13232319_13232500_13233912
ES.14321.5	chr17	+	3731	5	NIC	ENSMUSG00000006818.6	novel	1138	4	NA	NA	-2	-1996	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1413.16194666429	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGCATACTGCCTTT	NA	False	NA	NA	False	AATAAA	-38	NA	13225730	13237025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.51	chr17	+	3620	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	340	2016	-27	-2016	3prime_fragment	FALSE	canonical	3	3082	junction_3	122.60052564687	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGGTATGCTGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	13227043	13237005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.52	chr17	+	1090	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	357	4529	-10	-11	3prime_fragment	FALSE	canonical	3	3082	junction_3	122.60052564687	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATCCTCTATTTAGTG	NA	False	NA	20	True	ATTAAA	-17	NA	13227060	13234492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.53	chr17	+	5036	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	534	406	167	-406	3prime_fragment	FALSE	canonical	3	3082	junction_3	122.60052564687	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATTGTAGTACCATAA	NA	False	NA	NA	False	ACTAAA	-13	NA	13227237	13238615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.54	chr17	+	3391	3	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	2702	2016	179	-2016	3prime_fragment	FALSE	canonical	3	3082	junction_2	121	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGGTATGCTGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	13229405	13237005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13229524_13232319_13232500_13233912
ES.14321.55	chr17	+	3274	2	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	5614	2017	3091	-2017	3prime_fragment	FALSE	canonical	3	3082	junction_1	0	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGGTATGCTGTCT	2105	False	NA	NA	False	AATAAA	-17	NA	13232317	13237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13232500_13233912
ES.14321.56	chr17	+	8529	4	NNC	ENSMUSG00000006818.6	novel	804	2	NA	NA	-5238	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTGGGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	13248624	13258948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13248837_13248931_13253879_13253959_13254226_13255844
ES.14321.57	chr17	+	5942	1	NIC	ENSMUSG00000006818.6	novel	4057	7	NA	NA	-862	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATATTTTTCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	13253000	13258942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13253000_13258900
ES.14321.58	chr17	+	2080	1	Intergenic	novelGene_11993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	13385517	13387597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13385500_13387600
ES.14321.59	chr17	+	4204	3	Genic_Genomic	ENSMUSG00000117278.2	novel	3095	1	NA	NA	-160576	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTGGGATAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	13390433	13554103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_13391308_13391416_13391655_13551011
ES.14321.6	chr17	+	1427	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	10	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCTAGTAGTCTTTG	NA	False	NA	41	True	ATTAAA	-38	NA	13225730	13234513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.60	chr17	+	3471	2	Genic_Genomic	ENSMUSG00000117278.2	novel	3095	1	NA	NA	-159741	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATATTTTTCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	13391268	13554096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_13391655_13551011
ES.14321.7	chr17	+	1552	7	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.75847919871	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCTATTTAGTGGACA	NA	False	NA	24	True	ATTAAA	-21	NA	13225730	13234496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13225849_13226280_13226423_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.8	chr17	+	3962	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	-2	-1973	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGCAGGATTTTAT	NA	False	NA	NA	False	AAGAAA	-18	NA	13225730	13237048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14321.9	chr17	+	1152	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-263	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGTGAATTGCTC	NA	False	NA	45	True	ATTAAA	-33	NA	13225732	13234240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ES.14322.1	chr17	-	644	1	Intergenic	novelGene_11985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13183883	13183239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13183200_13183900
ES.14323.1	chr17	-	3714	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-17	124	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTATCCACCTAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	13211096	13185558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.10	chr17	-	3373	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	21	-1	intron_retention	FALSE	canonical	1	3	junction_2	236.372846259843	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211125	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192838_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.11	chr17	-	7875	7	NIC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	121	junction_6	220.304650175363	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211467	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13186939_13188291_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.12	chr17	-	1982	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	237.126677589195	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTTTGTTTTTTCC	NA	False	NA	-7	True	AATAAA	-13	NA	13211125	13185687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188401_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.13	chr17	-	3559	8	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	14	junction_7	256.25696605763	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTTTGTTTTTTCC	NA	False	NA	-7	True	AATAAA	-13	NA	13213056	13185687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ES.14323.14	chr17	-	3747	9	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_7	268.336513309315	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTTTGTTTTTTCC	NA	False	NA	-7	True	AATAAA	-13	NA	13211432	13185687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13207583_13207642_13211195
ES.14323.15	chr17	-	2567	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	13	junction_2	233.876559103214	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTGTTTGTTTTTTCC	NA	False	NA	-7	True	AATAAA	-13	NA	13211105	13185687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13193623_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.16	chr17	-	2714	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	20	-903	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGGCAGAGGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	13211126	13186588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.17	chr17	-	5367	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	40	-2220	40	2220	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTAAGGCTGAAAGCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	13211039	13189351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.18	chr17	-	4240	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	61	-1859	12	992	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTCACTGTTTTATGT	NA	False	NA	NA	False	AATAAA	-18	NA	13211372	13190579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.19	chr17	-	4193	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-17	-989	-17	989	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCCCTCACTGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	13211096	13190582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.2	chr17	-	8308	2	ISM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	15927	-127	7141	124	intron_retention	FALSE	canonical	3	317	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTATCCACCTAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	13195219	13185558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_13186939_13188291
ES.14323.20	chr17	-	3239	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-52	0	15	0	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGATTCCTTCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	13211131	13191571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.21	chr17	-	3140	5	NIC	ENSMUSG00000060475.14	novel	446	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	270.516635347995	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGATTCCTTCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	13213056	13191571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13212949
ES.14323.22	chr17	-	3175	6	FSM	ENSMUSG00000060475.14	ENSMUST00000233867.2	446	6	1	-2730	1	-2	multi-exon	FALSE	canonical	3	14	junction_5	266.82773469038	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTGTGATTCCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	13213055	13191573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ES.14323.23	chr17	-	3399	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	-95	-862	-95	-5	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGATTGTGATTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	13211528	13191576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.24	chr17	-	3033	7	NNC	ENSMUSG00000060475.14	novel	2442	6	NA	NA	-18	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	270.259134905742	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAATAAACAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	13211402	13191600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13193967_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.25	chr17	-	2362	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	82	-2	33	2	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGATCTTTTGTATT	NA	False	NA	NA	False	AGTAAA	-31	NA	13211351	13192436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.26	chr17	-	1669	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	-68	1586	-1	-719	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGGGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	13211147	13193157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.27	chr17	-	2425	7	NIC	ENSMUSG00000060475.14	novel	2442	6	NA	NA	-29	-719	intron_retention	FALSE	canonical	3	8	junction_6	268.473876237935	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGGGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	13213085	13193157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195_13212000_13212949
ES.14323.29	chr17	-	1738	7	NNC	ENSMUSG00000060475.14	novel	2442	6	NA	NA	-14	-721	intron_retention	FALSE	canonical	0	0	junction_5	291.332236840042	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATAGTTGGGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	13211398	13193159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13207583_13207636_13211195
ES.14323.3	chr17	-	2049	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	2	0	2	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211144	13185685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.30	chr17	-	4054	7	NNC	ENSMUSG00000060475.14	novel	536	4	NA	NA	-15	-1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.439285520661	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTTCTAGCAATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	13211094	13195622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13199053_13199570_13199837_13200636_13200696_13202343_13202400_13203664_13203739_13204802_13204841_13210963
ES.14323.31	chr17	-	176	1	Intergenic	novelGene_11987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTATAGGAGT	NA	False	NA	NA	False	NA	NA	NA	13201476	13201300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13201300_13201500
ES.14323.4	chr17	-	7772	7	NIC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	15	0	intron_retention	FALSE	canonical	3	178	junction_2	177.968786276945	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211131	13185685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13186939_13188291_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.5	chr17	-	3637	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	65	junction_2	221.334265632001	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211147	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ES.14323.6	chr17	-	3727	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	-1671	4	1	-1	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13213055	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.7	chr17	-	3747	8	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	-56	-1	intron_retention	FALSE	canonical	3	65	junction_2	238.239889392938	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211489	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13192596_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ES.14323.8	chr17	-	2113	9	NNC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	257.345797274795	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13211389	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13207583_13207636_13211195
ES.14323.9	chr17	-	2006	8	NIC	ENSMUSG00000060475.14	novel	2060	8	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	239.599069876563	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTTTGTTTTTTCCT	NA	False	NA	-6	True	AATAAA	-14	NA	13213088	13185686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ES.14324.1	chr17	-	164	1	Intergenic	novelGene_11989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATCATTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	13216371	13216207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13216200_13216400
ES.14325.1	chr17	-	179	1	Intergenic	novelGene_11990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATTGAGGACATT	NA	False	NA	NA	False	NA	NA	NA	13221448	13221269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13221300_13221400
ES.14326.1	chr17	-	131	1	Intergenic	novelGene_11991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	13225501	13225370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13225400_13225500
ES.14327.1	chr17	-	12216	1	Antisense	novelGene_ENSMUSG00000006818.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13247839	13235623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_13235600_13247800
ES.14328.1	chr17	-	2678	1	Intergenic	novelGene_11992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGGACTGAGAACAGACT	NA	False	NA	NA	False	NA	NA	NA	13266378	13263700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13263700_13266400
ES.14329.1	chr17	-	3821	1	Antisense	novelGene_ENSMUSG00000055602.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCTTTTCCGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	13291416	13287595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_13287600_13291400
ES.1433.1	chr1	-	1502	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	258	3	98	0	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	False	NA	0	True	NA	NA	NA	135302717	135298797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ES.1433.2	chr1	-	1391	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	265	107	105	-104	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGGGTCTCTTCACT	NA	False	NA	-104	True	TATAAA	-31	NA	135302710	135298901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ES.1433.3	chr1	-	1215	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	156	392	-4	-389	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCCCCTTCTCTT	NA	False	NA	0	True	ATTAAA	-27	NA	135302819	135299186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ES.1433.4	chr1	-	2506	4	NNC	ENSMUSG00000041889.8	novel	1763	5	NA	NA	84	-396	intron_retention	TRUE	non_canonical	0	0	junction_3	14.1970262926979	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135302731	135299193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135299735_135299934_135300103_135300889_135301532_135301576
ES.14330.1	chr17	-	3296	12	Fusion	ENSMUSG00000067049.9_ENSMUSG00000117147.2	novel	2791	11	NA	NA	-11903	17	multi-exon	FALSE	canonical	0	0	junction_2	4.02266307087956	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAATGAAGAAGTGAGG	NA	False	NA	NA	False	AATAAA	-21	NA	13362600	13315548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_13317114_13317283_13317373_13328667_13328741_13334386_13334519_13335065_13335202_13336506_13336725_13339647_13339774_13341630_13341861_13342156_13342339_13344453_13344599_13344823_13344878_13362254
ES.14330.2	chr17	-	2711	10	NNC	ENSMUSG00000067049.9	novel	2643	10	NA	NA	-11808	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.99382239013587	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGTCTTGCCCAAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	13362505	13327503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13328741_13334386_13334519_13335065_13335202_13336506_13336725_13339647_13339774_13341630_13341861_13342156_13342339_13344453_13344599_13344823_13344878_13362254
ES.14331.1	chr17	-	606	1	Antisense	novelGene_ENSMUSG00000117282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGCAACA	NA	False	NA	NA	False	AATATA	-13	NA	13416597	13415991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_13416000_13416600
ES.14332.1	chr17	+	1862	3	Intergenic	novelGene_11994	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGATTCTGGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	13633977	13639041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13634352_13637493_13638896_13638955
ES.14333.2	chr17	-	4537	14	NNC	ENSMUSG00000117092.2	novel	927	5	NA	NA	-52757	1177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.73311386551236	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAATGAAGAAGTGAGG	5392	False	NA	NA	False	AATAAA	-21	NA	13669344	13604270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13605836_13606005_13606094_13614285_13614418_13614964_13615101_13616404_13616623_13619533_13619660_13621490_13621721_13622014_13622197_13624366_13624512_13624736_13624791_13659754_13660208_13663070_13663276_13667119_13667189_13668410
ES.14334.1	chr17	+	171	1	Intergenic	novelGene_11995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	13695606	13695777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13695600_13695800
ES.14335.1	chr17	+	2592	3	Fusion	ENSMUSG00000090211.4_ENSMUSG00000060417.7	novel	2463	3	NA	NA	-15	760	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGGAGGTTTTCCTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	13721200	13739291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_13721317_13722461_13722586_13736939
ES.14335.2	chr17	+	5182	3	Fusion	ENSMUSG00000090211.4_ENSMUSG00000079711.5	novel	2463	3	NA	NA	15	1587	intron_retention	FALSE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	13721230	13750282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_13721317_13736990_13738171_13746366
ES.14335.3	chr17	+	3564	4	Fusion	ENSMUSG00000090211.4_ENSMUSG00000079711.5	novel	2463	3	NA	NA	23	1	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCGGAGGTTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	13721238	13748696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_13721317_13736990_13738577_13746366_13747953_13748382
ES.14335.4	chr17	+	7146	1	FSM	ENSMUSG00000079711.5	ENSMUST00000074512.7	1455	1	-4900	-791	-165	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGGAGGTTTTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	13741552	13748698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13741600_13748700
ES.14336.1	chr17	+	181	1	Intergenic	novelGene_11997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGCC	NA	False	NA	NA	False	NA	NA	NA	13777765	13777946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13777800_13777900
ES.14337.1	chr17	+	179	1	Intergenic	novelGene_11998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGTAGTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	13796466	13796645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13796500_13796600
ES.14338.1	chr17	+	846	4	Antisense	novelGene_ENSMUSG00000117063.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGGTCCATGTGTGT	3910	False	NA	NA	False	NA	NA	NA	13878831	13885959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_13878894_13879206_13879399_13884844_13884979_13885501
ES.14338.2	chr17	+	159	1	Intergenic	novelGene_11999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	6009	False	NA	NA	False	NA	NA	NA	13880930	13881089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13880900_13881100
ES.14339.1	chr17	+	3331	3	Antisense	novelGene_ENSMUSG00000117063.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCATAGTGGAATCTCA	NA	False	NA	NA	False	NA	NA	NA	13910492	13916706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_13910609_13912839_13913790_13914441
ES.1434.1	chr1	+	4620	1	Antisense	novelGene_ENSMUSG00000041879.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTTGCCGTCTGTCTG	NA	False	NA	NA	False	AATAAA	-42	NA	135307810	135312430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135307800_135312400
ES.14340.10	chr17	+	7409	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-62	3	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	63.9601365185812	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980738	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.102	chr17	+	7544	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_30	99.3769037082297	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTCCCTTGGTTGTT	NA	False	NA	28	True	ATTAAA	-17	NA	13980826	14126058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.104	chr17	+	7239	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	87.8218856194172	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980827	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14108983_14109060_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.105	chr17	+	7250	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	109.813549294888	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980828	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102704_14104002_14104198_14104830_14104923_14105586_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.106	chr17	+	7462	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	22	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_14	108.162045541556	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980831	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069444_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.108	chr17	+	7548	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_30	91.7924977494355	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980832	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080251_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.109	chr17	+	3051	19	NIC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	23	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	102.130030891391	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGGTTTTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	13980832	14074489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14074181
ES.14340.11	chr17	+	7631	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_30	84.9919748920202	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980744	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.110	chr17	+	7188	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	25	-109	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	92.9850334258534	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	13980834	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043561_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.111	chr17	+	9614	31	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-25	0	intron_retention	FALSE	canonical	1	6	junction_10	90.2624629744958	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980835	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050235_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.112	chr17	+	3108	14	NIC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	-18	-6560	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	73.0851817195678	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCATCCAAAGTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	13980842	14067927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695
ES.14340.114	chr17	+	7316	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	2	115	junction_20	65.9944026888971	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980843	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080251_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.117	chr17	+	14610	29	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-15	-104	intron_retention	FALSE	canonical	1	43	junction_26	92.3739833834313	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTATTGTTTTCAAAGT	NA	False	NA	28	True	AATAAA	-22	NA	13980845	14125952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14052700_14055499_14055619_14066533_14066596_14066695_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14119490_14122791_14122877_14124115
ES.14340.119	chr17	+	9995	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-7	-105	intron_retention	FALSE	canonical	0	0	junction_1	130.28844969862	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTATTGTTTTCAAAG	NA	False	NA	27	True	AATAAA	-21	NA	13980853	14125951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14021876_14021991_14024200_14024401_14027545_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.124	chr17	+	7273	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.3634584917661	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980874	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027535_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.127	chr17	+	131	1	Intergenic	novelGene_12001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	13989438	13989569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13989400_13989600
ES.14340.128	chr17	+	543	1	Intergenic	novelGene_12002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGGTATGCTGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	13993246	13993789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_13993200_13993800
ES.14340.129	chr17	+	6361	27	ISM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	57443	-1678	-32845	-109	3prime_fragment	FALSE	canonical	1	133	junction_15	56.6651641522582	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	14038378	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.13	chr17	+	7274	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-53	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	88.5230059399542	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTATTTGCTATTGT	NA	False	NA	19	True	AATAAA	-13	NA	13980747	14125943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071302_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.130	chr17	+	6492	26	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-28657	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	109.021832675845	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	14042566	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14042640_14043561_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.131	chr17	+	5841	24	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-21970	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.032587741353	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTATTTGCTATTGTT	NA	False	NA	20	True	AATAAA	-14	NA	14049253	14125944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071285_14072566_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.132	chr17	+	7761	21	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-6956	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	125.28551392719	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	14064267	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14118714_14118838_14119206_14119490_14122791_14122877_14124115
ES.14340.133	chr17	+	7741	20	ISM	ENSMUSG00000068036.17	ENSMUST00000139666.8	7732	33	83461	359	-6953	-3	3prime_fragment	FALSE	canonical	1	133	junction_8	63.4883024102573	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCCTTTGTCCCTTGG	NA	False	NA	23	True	ATTAAA	-12	NA	14064270	14126053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.134	chr17	+	6280	21	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6742	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	100.070275306906	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTCCCTTGGTTGTT	NA	False	NA	28	True	ATTAAA	-17	NA	14064481	14126058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14065279_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.135	chr17	+	5641	21	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6740	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	100.241645537172	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	14064483	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14064643_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.136	chr17	+	5836	21	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6724	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	99.3866188176255	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14064499	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14064855_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.137	chr17	+	6087	21	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6322	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	120.818458854597	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTTGTCCCTTGGT	NA	False	NA	24	True	ATTAAA	-13	NA	14064901	14126054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14065279_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.139	chr17	+	5921	21	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6226	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.756835996373	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14064997	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14065438_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.14	chr17	+	5967	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-49	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	92.4416834753132	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	13980751	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115_14124280_14125592
ES.14340.140	chr17	+	5593	22	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-6085	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.949817390559	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTATTGTTTTCAAA	NA	False	NA	26	True	AATAAA	-20	NA	14065138	14125950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14065279_14065461_14065540_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.141	chr17	+	6444	18	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-3091	0	intron_retention	FALSE	canonical	1	43	junction_14	100.787556215484	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14068132	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.143	chr17	+	5369	16	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.025611158195	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14071154	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14071818_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.145	chr17	+	4701	15	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	581	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.321575342374	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	14072575	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14072722_14075475_14075675_14080134_14080239_14082030_14082110_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.146	chr17	+	4515	15	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	712	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	117.259458519323	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	14072706	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116419_14119206_14119490_14122791_14122877_14124115
ES.14340.147	chr17	+	4413	8	ISM	ENSMUSG00000068036.17	ENSMUST00000139666.8	7732	33	123315	-266	1977	266	3prime_fragment	FALSE	canonical	3	354	junction_3	28.0836941578386	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTAGTGTTTGTGTTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	14104124	14126678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.148	chr17	+	4940	5	ISM	ENSMUSG00000068036.17	ENSMUST00000170827.9	7338	33	125941	0	-2048	0	3prime_fragment	FALSE	canonical	3	370	junction_3	17.1518949390439	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14106743	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.149	chr17	+	4796	5	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-491	3	intron_retention	FALSE	non_canonical	0	0	junction_4	171.305830315258	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	14108300	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14109240_14116349_14119490_14122791_14122877_14124115_14124280_14125592
ES.14340.150	chr17	+	2562	6	NNC	ENSMUSG00000068036.17	novel	1210	6	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	157.648215974682	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	14109023	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115_14124932_14125030
ES.14340.151	chr17	+	6988	2	NIC	ENSMUSG00000068036.17	novel	2662	3	NA	NA	-1207	-113	intron_retention	FALSE	canonical	3	418	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTATTTGCTATTGT	NA	False	NA	19	True	AATAAA	-13	NA	14117716	14125943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_14122877_14124115
ES.14340.152	chr17	+	6067	2	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-173	0	intron_retention	FALSE	canonical	3	418	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	14118750	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_14122877_14124115
ES.14340.153	chr17	+	2700	1	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	1720	-764	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCACTGGCTTTGCTA	NA	False	NA	NA	False	ATTAAA	-38	NA	14120805	14123505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_14120800_14123500
ES.14340.154	chr17	+	4530	1	NIC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	2445	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	14121530	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_14121500_14126100
ES.14340.17	chr17	+	7216	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	89.1519882174354	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTTGTCCCTTGGT	NA	False	NA	24	True	ATTAAA	-13	NA	13980763	14126054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030740_14038451_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.19	chr17	+	7306	30	ISM	ENSMUSG00000068036.17	ENSMUST00000139666.8	7732	33	-42	7731	-33	-876	5prime_fragment	TRUE	canonical	0	0	junction_8	109.038550383243	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGCTTGGCTCCCATT	NA	False	NA	NA	False	AATATA	-13	NA	13980767	14118681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349
ES.14340.2	chr17	+	9122	31	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-236	3	intron_retention	FALSE	canonical	1	133	junction_19	60.45366453372	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980564	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.20	chr17	+	7304	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	106.810879576182	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980767	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102704_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.21	chr17	+	7374	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	106.554544566348	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980768	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119500_14122793_14122877_14124115
ES.14340.27	chr17	+	7257	29	ISM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-164	5588	-29	-876	5prime_fragment	FALSE	canonical	1	133	junction_20	66.3862384313287	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGCTTGGCTCCCATT	NA	False	NA	NA	False	AATATA	-13	NA	13980771	14118681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349
ES.14340.28	chr17	+	7281	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-29	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	101.930073355798	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATTTGCTATTGTTT	NA	False	NA	21	True	AATAAA	-15	NA	13980771	14125945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066921_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.29	chr17	+	7258	32	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-29	-109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	81.3718613077955	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	13980771	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.31	chr17	+	7527	28	ISM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-164	12428	-29	-4744	5prime_fragment	FALSE	canonical	1	133	junction_20	67.0081582978047	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTTCTTTAAAGTTAAA	NA	False	NA	NA	False	GATAAA	-12	NA	13980771	14111841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243
ES.14340.33	chr17	+	1806	10	NIC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	-28	19722	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	81.408435271373	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTCTGCGTCTG	NA	False	NA	NA	False	TTTAAA	-6	NA	13980772	14050502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131
ES.14340.35	chr17	+	7386	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	89.7587586559833	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980774	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066921_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.36	chr17	+	7403	33	NIC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_28	103.592029586016	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980774	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14111224_14111261_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.39	chr17	+	7361	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	84.1601342667173	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980774	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.4	chr17	+	6240	33	NNC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-221	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	115.201996510477	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTCCTTTGTCCCTTG	NA	False	NA	22	True	ATTAAA	-11	NA	13980579	14126052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109235_14116349_14116485_14119206_14119490_14122791_14122877_14124115_14124280_14125592
ES.14340.44	chr17	+	7403	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	119.039773913753	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980776	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.49	chr17	+	7273	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	89.5180993680278	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980781	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104089_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.5	chr17	+	7679	1	Genic_Genomic	ENSMUSG00000068036.17	novel	NA	NA	NA	NA	-221	-42497	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAATATTGTATAGAA	NA	False	NA	NA	False	NA	NA	NA	13980579	13988258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_13980600_13988300
ES.14340.50	chr17	+	7249	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-18	-106	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	83.5929262276215	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTATTGTTTTCAAA	NA	False	NA	26	True	AATAAA	-20	NA	13980782	14125950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.51	chr17	+	7374	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	89.2223426659559	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTTGTCCCTTGGT	NA	False	NA	24	True	ATTAAA	-13	NA	13980782	14126054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066518_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.53	chr17	+	7285	33	NIC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-18	-109	combination_of_known_junctions	FALSE	canonical	1	7	junction_28	103.592029586016	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	13980782	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14111224_14111261_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.55	chr17	+	7404	33	NIC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	109.116475719469	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980782	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.56	chr17	+	6440	29	NNC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	-17	1448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.188474896425	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTCTTGGTGTAACTG	NA	False	NA	NA	False	GATAAA	-23	NA	13980783	14118033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049187_14049286_14050131_14050235_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349
ES.14340.59	chr17	+	7358	32	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-12	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	81.3718613077955	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTTGGTTGTTTTTCTG	NA	False	NA	34	True	ATTAAA	-23	NA	13980788	14126064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.61	chr17	+	7352	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-9	8	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_14	91.744986565117	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGGTTGTTTTTCTGT	NA	False	NA	35	True	ATTAAA	-24	NA	13980791	14126065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069375_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.62	chr17	+	6584	29	NNC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	-9	1449	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	86.504482601794	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTCTTGGTGTAACTGA	NA	False	NA	NA	False	GATAAA	-24	NA	13980791	14118034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355
ES.14340.64	chr17	+	6057	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.972205782637	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980792	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066921_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115_14124280_14125592
ES.14340.67	chr17	+	4748	20	NIC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	-4	6058	combination_of_known_junctions	FALSE	canonical	3	198	junction_2	52.8037709557453	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAGTACCTGAGA	NA	False	NA	NA	False	NA	NA	NA	13980796	14081898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134
ES.14340.68	chr17	+	7463	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-4	-109	combination_of_known_junctions	FALSE	canonical	1	34	junction_30	90.4301318195152	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTTGCTATTGTTTTC	NA	False	NA	23	True	AATAAA	-17	NA	13980796	14125947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.69	chr17	+	7375	33	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	116.812679741702	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980797	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14111224_14111261_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.7	chr17	+	7301	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-201	-1682	-66	-105	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTATTGTTTTCAAAG	NA	False	NA	27	True	AATAAA	-21	NA	13980734	14125951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.70	chr17	+	10146	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-3	3	intron_retention	FALSE	canonical	0	0	junction_5	110.64122065775	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980797	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14032372_14032450_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14119490_14122791_14122877_14124115
ES.14340.76	chr17	+	7524	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.096039462805	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980802	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13980993_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
ES.14340.77	chr17	+	7174	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	123.115040573443	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980803	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050235_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102649_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119204_14119490_14122791_14122877_14124115
ES.14340.78	chr17	+	7210	32	NNC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	1	-114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	120.650905504101	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTGTATTTGCTATTG	NA	False	NA	18	True	AATAAA	-12	NA	13980803	14125942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043561_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105771_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.79	chr17	+	7272	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	2	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	115.994237296245	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTATTGTTTTCAAA	NA	False	NA	26	True	AATAAA	-20	NA	13980804	14125950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.80	chr17	+	7493	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	105.306838683143	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCTTGGTTGTTTT	NA	False	NA	30	True	ATTAAA	-19	NA	13980804	14126060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14000056_14000207_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.82	chr17	+	6365	30	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	-3	995	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	85.5527317901992	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGTGTAATTTTAGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	13980806	14120552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206
ES.14340.83	chr17	+	6571	29	ISM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-126	6236	0	1448	5prime_fragment	FALSE	canonical	1	133	junction_20	66.3862384313287	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTCTTGGTGTAACTG	NA	False	NA	NA	False	GATAAA	-23	NA	13980809	14118033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349
ES.14340.85	chr17	+	7216	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	2	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	93.7848513090874	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGCTATTGTTTTCAA	NA	False	NA	25	True	AATAAA	-19	NA	13980811	14125949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104008_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.87	chr17	+	4183	1	NIC	ENSMUSG00000068036.17	novel	822	5	NA	NA	3	-45760	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCATTGTCCAGAAGTAT	NA	False	NA	NA	False	CATAAA	-14	NA	13980812	13984995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13980800_13985000
ES.14340.90	chr17	+	6014	33	NNC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	88.3461763462347	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTTGTCCCTTGGTT	NA	False	NA	25	True	ATTAAA	-14	NA	13980812	14126055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115_14124280_14125592
ES.14340.93	chr17	+	3215	10	NIC	ENSMUSG00000068036.17	novel	5153	31	NA	NA	4	21175	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	82.9959094633845	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTCCTTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	13980813	14051955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131
ES.14340.96	chr17	+	7156	32	NNC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.293138583224	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980821	14126056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027538_14027651_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050235_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14340.98	chr17	+	7331	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	94.4136734131626	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980822	14126057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066906_14069358_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ES.14341.1	chr17	-	4544	1	NIC	ENSMUSG00000117042.2	novel	796	3	NA	NA	13236	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTTTCTTTGTGATGT	NA	False	NA	NA	False	NA	NA	NA	13707362	13702818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13702800_13707400
ES.14341.10	chr17	-	3401	2	FSM	ENSMUSG00000085705.2	ENSMUST00000145030.2	445	2	1	-2957	1	2957	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTTCTAGAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	13903758	13892966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13896049_13903439
ES.14341.11	chr17	-	2902	1	NIC	ENSMUSG00000085705.2	novel	445	2	NA	NA	1	-618	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTACTTGTCTCCCTTGT	NA	False	NA	NA	False	AGTAAA	-13	NA	13903758	13900856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13900900_13903800
ES.14341.12	chr17	-	173	1	Intergenic	novelGene_12000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGATTGCTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	13917173	13917000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13917000_13917200
ES.14341.13	chr17	-	1405	3	FSM	ENSMUSG00000038347.16	ENSMUST00000148430.2	1839	3	432	2	-7	-2	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTTGGCCTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	13981655	13936699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_13937896_13948183_13948285_13981547
ES.14341.14	chr17	-	872	2	NIC	ENSMUSG00000038347.16	novel	616	2	NA	NA	-20	48	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTCTTCCTGTCCTA	NA	False	NA	NA	False	AAAAAG	-12	NA	13980650	13979619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13979823_13979981
ES.14341.2	chr17	-	3369	9	Fusion	ENSMUSG00000038347.16_ENSMUSG00000117042.2	novel	4453	6	NA	NA	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	1.08972473588517	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	13981671	13707282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_13709494_13710898_13711102_13716878_13717048_13760532_13760684_13763797_13763965_13768557_13768696_13774274_13774355_13789019_13789146_13981547
ES.14341.3	chr17	-	4400	4	NNC	ENSMUSG00000117042.2	novel	4453	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.88561808316413	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	13720621	13707282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13711102_13712080_13712306_13716878_13717048_13720434
ES.14341.4	chr17	-	2782	4	NNC	ENSMUSG00000117063.2	novel	2047	5	NA	NA	261020	2250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	13720620	13707284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13709494_13710898_13711102_13716878_13717052_13720423
ES.14341.5	chr17	-	4183	3	NIC	ENSMUSG00000117063.2	novel	2047	5	NA	NA	261018	2248	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCGTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	13720622	13707286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13711102_13716878_13717048_13720423
ES.14341.6	chr17	-	1927	3	NNC	ENSMUSG00000117063.2	novel	2047	5	NA	NA	261017	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTCCAGACTTCTT	NA	False	NA	NA	False	NA	NA	NA	13720623	13709532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_13711102_13716878_13717048_13720434
ES.14341.7	chr17	-	5399	1	NIC	ENSMUSG00000117042.2	novel	4453	6	NA	NA	-19	-5684	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCATTACTTGTAGATT	NA	False	NA	NA	False	ATTAAA	-16	NA	13720617	13715218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_13715200_13720600
ES.14341.8	chr17	-	1424	2	Antisense	novelGene_ENSMUSG00000060417.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAGAGAAGATTAAACA	NA	False	NA	NA	False	AATATA	-31	NA	13747657	13722431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_13722563_13746364
ES.14341.9	chr17	-	3286	1	Intergenic	novelGene_11996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTTGTTTGCTTGCT	NA	False	NA	NA	False	AATACA	-11	NA	13766245	13762959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_13763000_13766200
ES.14342.1	chr17	-	4146	1	Intergenic	novelGene_12003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATTAAAAATAATAACAAC	NA	False	NA	NA	False	NA	NA	NA	14004390	14000244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_14000200_14004400
ES.14342.2	chr17	-	1722	1	Intergenic	novelGene_12004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATAATGATCAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	14004390	14002668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_14002700_14004400
ES.14343.1	chr17	-	4340	4	Antisense	novelGene_ENSMUSG00000068036.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	TTTAAA	-13	NA	14074063	14067022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_14069520_14069833_14069923_14071039_14071306_14072575
ES.14343.2	chr17	-	4832	1	Antisense	novelGene_ENSMUSG00000068036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCTTAGGAGAGTGGC	NA	False	NA	NA	False	NA	NA	NA	14075114	14070282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_14070300_14075100
ES.14344.1	chr17	-	160	1	Intergenic	novelGene_12005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAGGCAGAGCTAAGCA	NA	False	NA	NA	False	NA	NA	NA	14371994	14371834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_14371800_14372000
ES.14345.1	chr17	-	339	1	Intergenic	novelGene_12006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14385509	14385170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_14385200_14385500
ES.14346.1	chr17	-	2767	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	305	178	305	-178	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTTGTCTCTTCC	NA	False	NA	-3	True	AATAAA	-25	NA	14424051	14415491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
ES.14346.2	chr17	-	2589	4	NIC	ENSMUSG00000048826.8	novel	3250	4	NA	NA	30	-179	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	28.5228952870419	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTGTCTTGTCTCTTC	NA	False	NA	-4	True	AATAAA	-24	NA	14424536	14415492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_14417574_14418078_14418355_14419407_14419541_14424437
ES.14346.3	chr17	-	1660	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	334	1256	334	-1256	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCCCTTCCTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	14424022	14416569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
ES.14347.1	chr17	-	5897	22	FSM	ENSMUSG00000023885.10	ENSMUST00000170872.3	5895	22	2	-4	2	4	multi-exon	FALSE	canonical	0	0	junction_8	0.843811673650921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTCTCTCCCTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	14914495	14885757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988_14910546_14911624_14911774_14914231
ES.14347.2	chr17	-	4309	22	FSM	ENSMUSG00000023885.10	ENSMUST00000170872.3	5895	22	-12	1598	-12	21	multi-exon	FALSE	canonical	0	0	junction_8	0.843811673650921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTAATGTTGTCAC	NA	False	NA	NA	False	CATAAA	-31	NA	14914509	14887359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988_14910546_14911624_14911774_14914231
ES.14348.1	chr17	+	178	1	Intergenic	novelGene_12007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTACATCTTT	NA	False	NA	NA	False	NA	NA	NA	15067880	15068058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15067900_15068100
ES.14349.1	chr17	+	183	1	Intergenic	novelGene_12008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAGATTGACTTAAAAT	NA	False	NA	NA	False	AAAAAG	-19	NA	15093833	15094016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15093800_15094000
ES.1435.1	chr1	+	2188	9	Antisense	novelGene_ENSMUSG00000041879.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135312871	135320069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135313222_135313670_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233
ES.1435.2	chr1	+	2692	1	Antisense	novelGene_ENSMUSG00000041879.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGATTTGGTGTACAC	NA	False	NA	NA	False	NA	NA	NA	135312873	135315565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135312900_135315600
ES.14350.1	chr17	-	532	2	NNC	ENSMUSG00000046991.13	novel	413	2	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTCTCAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	15163334	15159573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15159843_15163071
ES.14351.1	chr17	+	2558	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-33	-2	13	0	multi-exon	FALSE	canonical	3	15	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	9	True	AATAAA	-17	NA	15163458	15166198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15163582_15163763
ES.14351.2	chr17	+	1792	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	15	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAGGTCATCGTTAA	NA	False	NA	12	True	AATAAA	-17	NA	15163460	15165252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15163500_15165300
ES.14351.3	chr17	+	2727	1	Genic_Genomic	ENSMUSG00000050088.10	novel	NA	NA	NA	NA	-18	2	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCTGTTACTTTAGG	NA	False	NA	11	True	AATAAA	-19	NA	15163473	15166200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_15163500_15166200
ES.14351.4	chr17	+	1597	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-18	944	-18	4	multi-exon	FALSE	canonical	3	15	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAGGTCATCGTTAA	NA	False	NA	12	True	AATAAA	-17	NA	15163473	15165252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15163582_15163763
ES.14351.5	chr17	+	2345	3	NNC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTGGTGCTGTTACTTT	NA	False	NA	8	True	AATAAA	-16	NA	15163474	15166197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15163582_15163828_15164627_15164757
ES.14351.6	chr17	+	2466	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	42	-2	-4	2	multi-exon	FALSE	canonical	3	37	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCTGTTACTTTAGG	NA	False	NA	11	True	AATAAA	-19	NA	15163487	15166200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15163582_15163828
ES.14351.7	chr17	+	1463	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	75	968	-10	-18	multi-exon	FALSE	canonical	3	37	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAATAAATCAACT	NA	False	NA	-10	True	NA	NA	NA	15163520	15165230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15163582_15163828
ES.14351.8	chr17	+	1039	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	11	-666	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCCCAAGCAGGAAAAGC	NA	False	NA	NA	False	AATAAA	-27	NA	15163543	15164582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15163500_15164600
ES.14351.9	chr17	+	1965	1	ISM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	654	134	567	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTCCATCCTAAAG	NA	False	NA	NA	False	AATAGA	-22	NA	15164099	15166064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15164100_15166100
ES.14352.1	chr17	-	2025	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-349	19	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATTTATTTCTTTAT	NA	False	NA	0	True	AATAAA	-35	NA	15181884	15165251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
ES.14352.10	chr17	-	1971	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-344	6	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	263.797912885935	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTAAACATCAAGTTGA	NA	False	NA	-13	True	AATAAA	-22	NA	15181879	15165264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166502_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.11	chr17	-	2688	11	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-5	6	intron_retention	FALSE	canonical	3	797	junction_8	61.1889695942006	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTAAACATCAAGTTGA	NA	False	NA	-13	True	AATAAA	-22	NA	15181540	15165264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.12	chr17	-	2995	11	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-319	5	intron_retention	FALSE	canonical	3	223	junction_8	214.774882144072	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTTAAACATCAAGTTG	NA	False	NA	-14	True	AATAAA	-21	NA	15181854	15165265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
ES.14352.13	chr17	-	6733	9	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	9	2	intron_retention	FALSE	canonical	3	797	junction_6	66.6966078597705	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGACCTTAAACATCAAG	NA	False	NA	-17	True	AATAAA	-18	NA	15181526	15165268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.14	chr17	-	9348	6	NIC	ENSMUSG00000023883.14	novel	3901	8	NA	NA	-32	2	intron_retention	FALSE	canonical	3	832	junction_1	53.5813400355012	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGACCTTAAACATCAAG	NA	False	NA	-17	True	AATAAA	-18	NA	15181567	15165268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15175204_15175294_15175429_15176245_15177127_15179680_15179788_15181372
ES.14352.15	chr17	-	1913	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	267.758649187801	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181827	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166460_15166650_15166916_15166984_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.18	chr17	-	4584	10	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-322	0	intron_retention	FALSE	canonical	3	797	junction_8	61.5246613206224	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181857	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680
ES.14352.19	chr17	-	2595	10	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-25	0	intron_retention	FALSE	canonical	3	17	junction_9	281.271890780451	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181560	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15181372
ES.14352.2	chr17	-	2124	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-449	-12	-449	12	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCAAGTTGATTTATT	NA	False	NA	-7	True	AATAAA	-28	NA	15181984	15165258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.20	chr17	-	3262	10	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-318	0	intron_retention	FALSE	canonical	3	797	junction_7	64.3343887842802	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181853	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.21	chr17	-	1812	11	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-338	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	274.309332688481	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181873	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15165447_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.22	chr17	-	2943	10	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	223	junction_7	225.033330864563	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181540	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
ES.14352.23	chr17	-	4556	9	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	29	0	intron_retention	FALSE	canonical	3	797	junction_6	57.7012781487551	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181506	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15166650_15166916_15167026_15170821_15170978_15172881_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.24	chr17	-	1937	13	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-324	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	256.774693175857	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181859	15165270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372_15181564_15181613
ES.14352.26	chr17	-	7416	8	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	797	junction_5	62.3171611310125	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACGATGACCTTAAA	NA	False	NA	-24	True	AATAAA	-11	NA	15181549	15165275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15173036_15174276_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.27	chr17	-	4497	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-128	2371	-128	358	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCGTGTATTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	15181663	15167641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.28	chr17	-	4436	9	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	-415	2719	-415	10	5prime_fragment	FALSE	canonical	3	797	junction_6	66.6966078597705	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTTTTGCAAAGAAAAT	NA	False	NA	8	True	AATAAA	-30	NA	15181950	15167989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.30	chr17	-	4325	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-318	2	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_6	238.494758852265	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	0	True	AATAAA	-22	NA	15181853	15167997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
ES.14352.31	chr17	-	3920	8	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-14	2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	312.987448401917	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGTCATCTTTTGCA	NA	False	NA	0	True	AATAAA	-22	NA	15181549	15167997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15181372
ES.14352.33	chr17	-	3889	9	NNC	ENSMUSG00000023883.14	novel	3901	8	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	387.592569588221	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181567	15167999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15169289_15169335_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15181372
ES.14352.35	chr17	-	4683	8	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	832	junction_1	54.3398226582551	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181541	15167999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15177127_15179680_15179788_15181372
ES.14352.37	chr17	-	4687	8	NIC	ENSMUSG00000023883.14	novel	3901	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	797	junction_5	62.3171611310125	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181544	15167999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15173036_15174276_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.38	chr17	-	3985	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	307.14155938264	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATGCCTCTGTCATCT	NA	False	NA	-6	True	AATAAA	-16	NA	15181569	15168003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15170978_15172881_15173036_15174332_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.39	chr17	-	3961	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-1001	-5	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	302.737510064412	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATGCCTCTGTCATC	NA	False	NA	-7	True	AATAAA	-15	NA	15182536	15168004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15182418
ES.14352.4	chr17	-	2199	10	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	36	12	intron_retention	FALSE	canonical	3	17	junction_9	272.197640613499	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCAAGTTGATTTATT	NA	False	NA	-7	True	AATAAA	-28	NA	15181499	15165258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15181372
ES.14352.40	chr17	-	3866	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-634	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	305.647851906405	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAATGCCTCTGTCAT	NA	False	NA	-8	True	AATAAA	-14	NA	15182169	15168005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15182145
ES.14352.41	chr17	-	4676	8	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-35	-28	intron_retention	FALSE	canonical	0	0	junction_4	318.962476201339	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAGCCAAAAT	NA	False	NA	-30	True	NA	NA	NA	15181570	15168027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15170978_15172881_15173036_15174276_15175204_15175294_15175420_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.5	chr17	-	1599	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-38	12	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	264.919479424433	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCAAGTTGATTTATT	NA	False	NA	-7	True	AATAAA	-28	NA	15181573	15165258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166574_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.6	chr17	-	5478	3	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	56	7	intron_retention	FALSE	canonical	3	832	junction_2	44.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAAACATCAAGTTGAT	NA	False	NA	-12	True	AATAAA	-23	NA	15172912	15165263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15166650_15166916_15170978_15172881
ES.14352.7	chr17	-	1802	11	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-327	7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	327.458226343453	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAAACATCAAGTTGAT	NA	False	NA	-12	True	AATAAA	-23	NA	15181862	15165263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
ES.14352.8	chr17	-	8681	7	NIC	ENSMUSG00000023883.14	novel	3901	8	NA	NA	-26	7	intron_retention	FALSE	canonical	3	797	junction_4	64.8367608348501	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTAAACATCAAGTTGAT	NA	False	NA	-12	True	AATAAA	-23	NA	15181561	15165263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15170978_15172881_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ES.14352.9	chr17	-	1671	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-1048	6	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_11	261.866819977176	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTAAACATCAAGTTGA	NA	False	NA	-13	True	AATAAA	-22	NA	15182583	15165264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15182418
ES.14353.1	chr17	+	2393	9	NNC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	-16	-714	intron_retention	FALSE	canonical	3	17	junction_4	73.8333215763723	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTTAATCTTATTTC	NA	False	NA	NA	False	AATAAA	-29	NA	15199122	15208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201946_15202561_15202652_15205079_15205178_15206035_15207095_15207857_15207961_15208335
ES.14353.10	chr17	+	5117	3	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	405	5727	-4	-4196	intron_retention	FALSE	canonical	3	116	junction_1	76	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15199134	15205440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15199162_15199762_15199932_15200519
ES.14353.100	chr17	+	1342	12	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-618	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.8273489511296	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	6	True	ATTAAA	-19	NA	15268843	15284486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15268918_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15284329
ES.14353.101	chr17	+	1301	8	Fusion	ENSMUSG00000036552.20_ENSMUSG00000116655.2	novel	1342	8	NA	NA	-20	-14488	multi-exon	FALSE	canonical	0	0	junction_7	40.5950635382366	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCCTTATAAGAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	15273083	15378832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15273346_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15378587
ES.14353.102	chr17	+	3949	8	NNC	ENSMUSG00000036552.20	novel	1342	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	36.9390010140822	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15273088	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15273346_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.103	chr17	+	1805	8	NNC	ENSMUSG00000036552.20	novel	1342	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.5950635382366	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15273089	15284492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15273346_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283737
ES.14353.104	chr17	+	1216	7	NIC	ENSMUSG00000036552.20	novel	1571	7	NA	NA	309	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	36.2050487578122	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGGTGGGTCTGTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	15273629	15295254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15294678
ES.14353.105	chr17	+	3998	2	NNC	ENSMUSG00000036552.20	novel	572	4	NA	NA	628	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATGAACTCTATGTTG	NA	False	NA	4	True	ATTAAA	-17	NA	15280343	15284484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15281445_15281587
ES.14353.106	chr17	+	3591	1	NIC	ENSMUSG00000036552.20	novel	1342	8	NA	NA	1184	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTATGTTGCCTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	15280899	15284490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15280900_15284500
ES.14353.107	chr17	+	5660	1	Intergenic	novelGene_12014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCCAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	15287789	15293449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15287800_15293400
ES.14353.108	chr17	+	3577	1	Intergenic	novelGene_12015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGTTTTTGAAATAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	15288552	15292129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15288600_15292100
ES.14353.109	chr17	+	2523	1	NIC	ENSMUSG00000036552.20	novel	827	4	NA	NA	6412	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTGTCAGCATCCA	NA	False	NA	NA	False	NA	NA	NA	15292288	15294811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15292300_15294800
ES.14353.11	chr17	+	2309	13	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	-2	-44	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	76.3680325063366	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGGGTTCTGAAGC	NA	False	NA	NA	False	AATATA	-19	NA	15199136	15211123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200773_15201837_15201940_15202561_15202652_15203150_15203297_15205079_15205178_15206035_15206830_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ES.14353.110	chr17	+	5431	1	Intergenic	novelGene_12016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATATGGTGCTTAGCG	NA	False	NA	NA	False	AATAAA	-13	NA	15312909	15318340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15312900_15318300
ES.14353.111	chr17	+	2548	1	Intergenic	novelGene_12018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATCCATG	NA	False	NA	NA	False	NA	NA	NA	15358156	15360704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15358200_15360700
ES.14353.12	chr17	+	1786	11	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	1	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.9612410580025	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGAGGCCCAACATTG	NA	False	NA	NA	False	AATAAA	-16	NA	15199139	15208909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200773_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206706_15206830_15206979_15207095_15207857_15207961_15208335
ES.14353.13	chr17	+	2319	10	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	1	-728	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	79.8039263862792	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGAGGCCCAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	15199139	15208908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200773_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206830_15206979_15207095_15207857_15207961_15208335
ES.14353.14	chr17	+	2245	10	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	13	junction_7	75.4865698135915	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTAATGTTTTGGCCCT	NA	False	NA	NA	False	AAAAAG	-18	NA	15199144	15209673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206109_15206979_15207095_15207857_15207961_15208335
ES.14353.15	chr17	+	4312	32	Fusion	ENSMUSG00000036552.20_ENSMUSG00000116895.2_ENSMUSG00000116953.2	novel	1684	12	NA	NA	6	-2	multi-exon	FALSE	canonical	0	0	junction_7	71.3995514112474	321	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTATGTTGCCTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	15199144	15284490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206706_15206830_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808_15210983_15230230_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15234522_15234669_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176_15242351_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.16	chr17	+	6912	14	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	-13	6221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	82.7735915351104	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTGTCTATTCATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	15199155	15218055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199257_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150_15203297_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808_15210983_15212617
ES.14353.17	chr17	+	1552	12	NNC	ENSMUSG00000116953.2	novel	1586	11	NA	NA	18	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.1385646432472	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTGTCTTTGAAAT	NA	False	NA	NA	False	AATATA	-41	NA	15199186	15211145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199349_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ES.14353.18	chr17	+	1595	10	ISM	ENSMUSG00000116953.2	ENSMUST00000231723.2	1586	11	19	766	19	-729	5prime_fragment	FALSE	canonical	0	0	junction_7	87.0322772536179	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTTGAGGCCCAACAT	NA	False	NA	NA	False	AATAAA	-14	NA	15199187	15208907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15199257_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335
ES.14353.19	chr17	+	1426	11	NNC	ENSMUSG00000116953.2	novel	1586	11	NA	NA	28	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.7089133444645	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTTAGCAACAGTCA	NA	False	NA	NA	False	ACTAAA	-22	NA	15199196	15209449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199349_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
ES.14353.2	chr17	+	1393	12	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	-16	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	80.131503487952	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGGGTTCTGAAGC	NA	False	NA	NA	False	AATATA	-19	NA	15199122	15211123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206706_15206830_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ES.14353.20	chr17	+	3247	25	Fusion	ENSMUSG00000116895.2_ENSMUSG00000116953.2	novel	1684	12	NA	NA	149	-220	multi-exon	FALSE	canonical	0	0	junction_8	83.8423516521069	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGGGTTCTGAAGC	NA	False	NA	NA	False	AATATA	-19	NA	15199317	15242491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15199349_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150_15203297_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808_15210983_15230230_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239906_15240527_15240597_15242176
ES.14353.21	chr17	+	8296	4	NIC	ENSMUSG00000116953.2	novel	2416	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	71	junction_3	80.524668408024	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCTCAAGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	15199760	15211835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199932_15200519_15202652_15205079_15207095_15207857
ES.14353.22	chr17	+	4470	3	NIC	ENSMUSG00000116953.2	novel	2416	10	NA	NA	0	-4196	intron_retention	FALSE	canonical	3	213	junction_2	27.5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15199760	15205440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199932_15200519_15201940_15202561
ES.14353.23	chr17	+	1506	8	NNC	ENSMUSG00000116953.2	novel	2416	10	NA	NA	0	-727	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	91.79302361113	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGAGGCCCAACATTG	NA	False	NA	NA	False	AATAAA	-16	NA	15199760	15208909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199932_15200519_15200773_15201837_15201940_15202561_15202652_15205079_15205178_15206979_15207095_15207857_15207961_15208335
ES.14353.24	chr17	+	4868	4	NIC	ENSMUSG00000116953.2	novel	2416	10	NA	NA	2891	-185	intron_retention	FALSE	canonical	3	61	junction_3	4.32049379893857	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTAGCAACAGTCAGA	NA	False	NA	NA	False	ACTAAA	-24	NA	15202651	15209451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15207095_15207857_15207961_15208335_15208366_15209159
ES.14353.25	chr17	+	5466	1	NIC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	3682	-728	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGAGGCCCAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	15203442	15208908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15203400_15208900
ES.14353.26	chr17	+	5191	1	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	6217	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCTCTGTTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	15205977	15211168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15206000_15211200
ES.14353.27	chr17	+	2852	17	Fusion	ENSMUSG00000116895.2_ENSMUSG00000116953.2	novel	1684	12	NA	NA	8173	497	multi-exon	FALSE	canonical	0	0	junction_4	74.1728344813652	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTTTATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	15207933	15243208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15207961_15208335_15208366_15209159_15209229_15210808_15210983_15230212_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15234522_15234669_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ES.14353.28	chr17	+	2089	13	Fusion	ENSMUSG00000116895.2_ENSMUSG00000116953.2	novel	1684	12	NA	NA	10838	-1590	multi-exon	FALSE	canonical	0	0	junction_2	79.8665553699837	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGATACTTTCTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	15210598	15241121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15210679_15210808_15210983_15230212_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237476_15238346_15238462_15239227_15239331_15239703_15239734_15240527
ES.14353.29	chr17	+	7134	1	Antisense	novelGene_ENSMUSG00000079710.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTTTATCTATGTGA	NA	False	NA	NA	False	NA	NA	NA	15219396	15226530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_15219400_15226500
ES.14353.3	chr17	+	6107	7	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	-9	-178	intron_retention	FALSE	canonical	3	63	junction_6	66.9618465164222	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACAGTCAGATATCTTT	NA	False	NA	NA	False	ACTAAA	-31	NA	15199129	15209458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15205178_15206035_15207961_15208335
ES.14353.30	chr17	+	5227	3	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	30	5828	30	-5828	intron_retention	FALSE	canonical	3	116	junction_1	77	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230467	15236883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15230534_15231134_15231304_15231891
ES.14353.31	chr17	+	803	6	NNC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	54	-7929	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	84.7216619289305	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCCCATTAACCATGT	NA	False	NA	NA	False	ATTAAA	-6	NA	15230491	15234782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15234522
ES.14353.32	chr17	+	4506	4	NIC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	54	-5903	intron_retention	FALSE	canonical	3	116	junction_1	63.5050304219192	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15230491	15236808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15230534_15231134_15231304_15231891_15233312_15233933
ES.14353.33	chr17	+	3717	30	Fusion	ENSMUSG00000036552.20_ENSMUSG00000116895.2	novel	2535	18	NA	NA	57	-60	multi-exon	FALSE	canonical	0	0	junction_7	69.1647982881135	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTCTGTGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	15230494	15294954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176_15242351_15261580_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15294678
ES.14353.34	chr17	+	3316	5	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	66	5903	66	-5903	intron_retention	FALSE	canonical	3	116	junction_1	56.3488021168152	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15230503	15236808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933
ES.14353.35	chr17	+	3378	5	NNC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	69	-5951	intron_retention	FALSE	canonical	3	28	junction_3	92.351231718911	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	15230506	15236760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15230534_15231134_15231304_15231891_15232145_15233209_15233312_15233933
ES.14353.36	chr17	+	2761	4	NIC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	69	-5828	intron_retention	FALSE	canonical	3	116	junction_1	63.378930954134	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230506	15236883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15230534_15231134_15231304_15231891_15234024_15236450
ES.14353.37	chr17	+	4543	8	NIC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	69	-1019	intron_retention	FALSE	canonical	3	103	junction_7	55.0191061433783	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGACTCTTCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	15230506	15241692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15239331_15239703
ES.14353.38	chr17	+	1717	11	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	69	1478	69	-1478	5prime_fragment	FALSE	canonical	0	0	junction_7	68.9100863444532	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGATTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	15230506	15241233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
ES.14353.39	chr17	+	1478	11	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	72	1714	72	-1714	5prime_fragment	FALSE	canonical	0	0	junction_7	68.9100863444532	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230509	15240997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
ES.14353.4	chr17	+	1419	11	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	80.0650360644395	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGCTCTGTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	15199130	15211167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15199162_15199762_15199932_15200519_15200773_15201837_15201940_15202561_15202652_15205079_15205178_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ES.14353.40	chr17	+	853	6	ISM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	79	5926	79	-5926	5prime_fragment	FALSE	canonical	3	116	junction_1	50.8173198821032	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230516	15236785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450
ES.14353.41	chr17	+	3370	5	NIC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	-75	-5926	intron_retention	FALSE	canonical	3	11	junction_1	96.1535230763803	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15230521	15236785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15230629_15231134_15231304_15231891_15232032_15233209_15233312_15233933
ES.14353.42	chr17	+	1420	11	NNC	ENSMUSG00000116895.2	novel	1011	8	NA	NA	-8	-1886	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.5480839750389	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAACAGTCAGATATCTT	NA	False	NA	NA	False	ACTAAA	-30	NA	15230588	15240825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15230721_15231134_15231304_15231891_15232032_15233209_15233318_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527
ES.14353.43	chr17	+	3474	8	NIC	ENSMUSG00000116895.2	novel	1684	12	NA	NA	629	-1893	intron_retention	FALSE	canonical	3	17	junction_4	76.2054152020868	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTTAGCAACAGTCAG	NA	False	NA	NA	False	ACTAAA	-23	NA	15231225	15240818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933_15236549_15238346_15238462_15239227_15239331_15239703_15239734_15240527
ES.14353.44	chr17	+	7135	1	Antisense	novelGene_ENSMUSG00000079707.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTTTATCTATGTGA	NA	False	NA	NA	False	NA	NA	NA	15250763	15257898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_15250800_15257900
ES.14353.45	chr17	+	2911	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	59.4887678037601	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	6	True	ATTAAA	-19	NA	15261489	15284486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.46	chr17	+	2532	19	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-7	-3226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.0034494404693	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTCTGAATTTCATTT	NA	False	NA	NA	False	NA	NA	NA	15261869	15291788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15286087_15286208_15291262
ES.14353.47	chr17	+	5598	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_16	57.2787864309292	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15261869	15284492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.48	chr17	+	5792	2	ISM	ENSMUSG00000036552.20	ENSMUST00000226384.2	854	7	-35	657	-7	388	intron_retention	FALSE	canonical	3	116	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261869	15268262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15261909_15262509
ES.14353.5	chr17	+	3911	4	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	405	5755	-4	-4224	intron_retention	FALSE	canonical	3	116	junction_1	63.0766729200793	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15199134	15205412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837
ES.14353.50	chr17	+	6317	1	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-6	313	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15261870	15268187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261900_15268200
ES.14353.51	chr17	+	3571	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	15	junction_6	64.4748281130521	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATGAACTCTATGTT	NA	False	NA	3	True	ATTAAA	-16	NA	15261870	15284483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15265897_15266044_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.52	chr17	+	5123	3	FSM	ENSMUSG00000036552.20	ENSMUST00000226488.2	793	3	-1	-4329	-1	313	multi-exon	FALSE	canonical	3	116	junction_1	77	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15261875	15268187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15261909_15262509_15262679_15263266
ES.14353.53	chr17	+	4784	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.9965122338786	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15261876	15284492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.54	chr17	+	2042	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	408	85	1	-85	multi-exon	FALSE	canonical	0	0	junction_7	62.8043041744542	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAAATCACGAATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	15261877	15284027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.55	chr17	+	4680	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	70.814978964021	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261877	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269452_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15281330_15281445_15281587
ES.14353.56	chr17	+	3137	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	1	515	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	64.7974752808176	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGACTTTTTCAACATG	NA	False	NA	NA	False	NA	NA	NA	15261877	15285009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.57	chr17	+	4561	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	70.5247075499076	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTATGTTGCCTTTCA	NA	False	NA	11	True	ATTAAA	-24	NA	15261879	15284491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15281330_15281445_15281587
ES.14353.58	chr17	+	2181	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.5292777091213	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGTCATGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	15261880	15310307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268918_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15310000
ES.14353.59	chr17	+	1417	11	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	-202	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	76.2200104959321	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTAGCAACAGTCAGA	NA	False	NA	NA	False	ACTAAA	-24	NA	15261880	15272124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832
ES.14353.6	chr17	+	3604	24	Fusion	ENSMUSG00000116895.2_ENSMUSG00000116953.2	novel	1684	12	NA	NA	-4	-216	multi-exon	FALSE	canonical	0	0	junction_12	73.8362516687534	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGTTCTGAAGCTGAA	NA	False	NA	NA	False	AATATA	-23	NA	15199134	15242495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206830_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808_15210983_15230212_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ES.14353.60	chr17	+	3142	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	-2	intron_retention	FALSE	canonical	1	3	junction_16	63.4225135493186	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTCTGGCCTGGCCTG	NA	False	NA	NA	False	NA	NA	NA	15261880	15295012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15286087_15286208_15294678
ES.14353.61	chr17	+	4780	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.7174142359433	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	6	True	ATTAAA	-19	NA	15261880	15284486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.62	chr17	+	2382	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	59.3199745026918	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261880	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.63	chr17	+	4959	19	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.7447822451796	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTATGTTGCCTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	15261880	15284490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263231_15263407_15264584_15264687_15265308_15265399_15265897_15266044_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.64	chr17	+	5782	2	ISM	ENSMUSG00000036552.20	ENSMUST00000227786.2	427	4	-2776	706	4	410	intron_retention	FALSE	canonical	3	212	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTGCTGTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	15261880	15268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15264687_15265308
ES.14353.65	chr17	+	2905	6	NIC	ENSMUSG00000036552.20	novel	788	6	NA	NA	4	286	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	98.5770764427511	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261880	15268160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15265897
ES.14353.66	chr17	+	3392	5	ISM	ENSMUSG00000036552.20	ENSMUST00000226599.2	788	6	-14	-2091	5	388	intron_retention	FALSE	canonical	3	116	junction_1	56.3488021168152	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261881	15268262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308
ES.14353.68	chr17	+	4314	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.9965122338786	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAAATCACGAATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	15261881	15284027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.69	chr17	+	2468	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.22804221099	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	6	True	ATTAAA	-19	NA	15261881	15284486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269452_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.7	chr17	+	4924	6	NIC	ENSMUSG00000116953.2	novel	2909	11	NA	NA	-4	-728	intron_retention	FALSE	canonical	3	63	junction_5	69.1595257357943	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGAGGCCCAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	15199134	15208908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199162_15199762_15199932_15200519_15202652_15205079_15205178_15206035_15207961_15208335
ES.14353.70	chr17	+	5147	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	-83	intron_retention	FALSE	canonical	3	36	junction_6	55.7392085968217	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATCACGAATCAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	15261881	15284029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15267925_15268781_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.71	chr17	+	2499	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	67.410481457861	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATGAACTCTATGTTG	NA	False	NA	4	True	ATTAAA	-17	NA	15261881	15284484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273477_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.72	chr17	+	3175	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	55.6502299805294	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261881	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.73	chr17	+	3333	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	5	1	intron_retention	FALSE	canonical	3	59	junction_16	52.7551833946201	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATGTTGCCTTTCATT	NA	False	NA	13	True	ATTAAA	-26	NA	15261881	15284493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.74	chr17	+	1253	11	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-9	292	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	72.1837239272123	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAAAAGTCTGGGTTC	NA	False	NA	NA	False	NA	NA	NA	15261886	15273784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15267826_15267925_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475
ES.14353.75	chr17	+	5720	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	15	junction_6	63.7376217713349	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261886	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15265897_15266044_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.76	chr17	+	6465	16	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-5	-61	intron_retention	FALSE	canonical	1	3	junction_14	67.4613963685899	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGCTTCTGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261890	15294953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15286087_15286208_15294678
ES.14353.77	chr17	+	2621	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	61.9258402331475	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261891	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.78	chr17	+	2561	19	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.6444955467759	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGTGGGTCTGTTTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	15261891	15295255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15286087_15286208_15294678
ES.14353.79	chr17	+	4455	4	NIC	ENSMUSG00000036552.20	novel	788	6	NA	NA	-2	285	intron_retention	FALSE	canonical	3	116	junction_1	63.5050304219192	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15261893	15268159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15264687_15265308
ES.14353.8	chr17	+	2473	10	NIC	ENSMUSG00000116953.2	novel	2416	10	NA	NA	-4	-762	intron_retention	FALSE	canonical	3	15	junction_6	81.0949755640163	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	15199134	15208874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150_15203297_15205079_15205178_15206035_15207095_15207857_15207961_15208335
ES.14353.80	chr17	+	2917	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_16	58.52883904538	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGTTGCCTTTCATTT	NA	False	NA	14	True	ATTAAA	-27	NA	15261893	15284494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15284246
ES.14353.81	chr17	+	2599	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	64.0100554384374	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATGAACTCTATGTTG	NA	False	NA	4	True	ATTAAA	-17	NA	15261900	15284484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15262004_15262509_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.82	chr17	+	4959	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	68.998620917967	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261901	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262004_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268918_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.83	chr17	+	4817	18	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	2237	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.7468828685741	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGTCTGTGGTTTGTT	NA	False	NA	NA	False	GATAAA	-2	NA	15261901	15286731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15262004_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.84	chr17	+	5794	2	ISM	ENSMUSG00000036552.20	ENSMUST00000226561.2	1019	4	-607	-2368	1	410	intron_retention	FALSE	canonical	3	270	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTGCTGTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	15261902	15268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15262679_15263266
ES.14353.85	chr17	+	3894	4	FSM	ENSMUSG00000036552.20	ENSMUST00000226561.2	1019	4	-604	-2271	1	313	multi-exon	FALSE	canonical	3	171	junction_2	40.6147209217982	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCGAGGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	15261905	15268187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308
ES.14353.86	chr17	+	4811	18	NNC	ENSMUSG00000036552.20	novel	1571	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.9144077645305	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15261937	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262004_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.87	chr17	+	2615	18	NNC	ENSMUSG00000036552.20	novel	1571	7	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	65.2164880334619	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15262020	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262096_15262509_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268855_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.88	chr17	+	1973	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	-83	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	59.6395422517645	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATCACGAATCAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	15262507	15284029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268855_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.89	chr17	+	4893	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.7953185017038	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15262507	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15265897_15266044_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.9	chr17	+	1490	11	NIC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	-4	-7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	83.3357066328714	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15199134	15209629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150_15203297_15205079_15205178_15206979_15207095_15207857_15207961_15208335_15208366_15209159
ES.14353.90	chr17	+	2584	17	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	66.7761828330281	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15262507	15284485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.91	chr17	+	1490	12	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.637037033958	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAAGTCTGGGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	15262507	15273787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269452_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475
ES.14353.92	chr17	+	2582	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.0320991071734	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15262507	15284492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263520_15264584_15264687_15265308_15265396_15267826_15267919_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.93	chr17	+	4745	17	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.9315745612256	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATGAACTCTATGTT	NA	False	NA	3	True	ATTAAA	-16	NA	15262507	15284483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.94	chr17	+	2753	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.5157056667523	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAACTCTATGTTGCC	NA	False	NA	6	True	ATTAAA	-19	NA	15262507	15284486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263520_15264584_15264687_15265308_15265399_15265897_15266044_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.95	chr17	+	3349	19	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	145	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.3091571427933	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACCATGAACTCTATG	NA	False	NA	1	True	ATTAAA	-14	NA	15262654	15284481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15262679_15263266_15263407_15264584_15264693_15265308_15265399_15265897_15266044_15267229_15267450_15267826_15267925_15268781_15269576_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ES.14353.96	chr17	+	5739	16	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	842	1126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.4015522654353	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTTCTTCTTTTC	NA	False	NA	NA	False	AAAAAG	-44	NA	15263351	15285620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15263520_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
ES.14353.97	chr17	+	4510	12	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	1120	1	intron_retention	FALSE	canonical	0	0	junction_11	35.0475473965354	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGTCATGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	15265776	15310307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15267925_15268781_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15310000
ES.14353.98	chr17	+	4537	11	NIC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	1827	-87	intron_retention	FALSE	canonical	3	59	junction_10	21.7292429688657	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAAGAAATCACGAATC	NA	False	NA	NA	False	AATAAA	-13	NA	15266483	15284025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ES.14353.99	chr17	+	4400	2	ISM	ENSMUSG00000036552.20	ENSMUST00000226464.2	598	5	-2971	1910	1834	1	intron_retention	FALSE	canonical	3	152	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGAGGCCCAACATTG	NA	False	NA	NA	False	AATAAA	-16	NA	15266490	15271582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15269841_15270532
ES.14354.1	chr17	-	489	3	FSM	ENSMUSG00000116780.2	ENSMUST00000231584.2	459	3	17	-47	17	47	multi-exon	FALSE	canonical	3	13	junction_1	7.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGTGAGCCTCGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	15198938	15184456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15184618_15190648_15190856_15198817
ES.14354.10	chr17	-	5342	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	15213486	15208144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15208100_15213500
ES.14354.11	chr17	-	795	2	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCATGCTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	15210145	15208151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15208854_15210052
ES.14354.12	chr17	-	900	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTGTGTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	15210867	15209967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15210000_15210900
ES.14354.13	chr17	-	2004	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTCTGTTCGTGATT	NA	False	NA	NA	False	NA	NA	NA	15213467	15211463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15211500_15213500
ES.14354.14	chr17	-	1362	2	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATTCTGTTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	15213157	15211468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15212670_15212996
ES.14354.15	chr17	-	1636	1	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAAATAGCCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	15213456	15211820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15211800_15213500
ES.14354.2	chr17	-	6322	1	Genic_Genomic	ENSMUSG00000116780.2	novel	NA	NA	NA	NA	8174	44	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATCTGTGAGCCTCGT	NA	False	NA	NA	False	AATAAA	-8	NA	15190781	15184459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_15184500_15190800
ES.14354.3	chr17	-	861	3	ISM	ENSMUSG00000116780.2	ENSMUST00000097399.6	712	4	1	3040	1	-3040	5prime_fragment	TRUE	canonical	3	15	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATCCCAGGACTTGGG	NA	False	NA	NA	False	AATAAA	-28	NA	15199051	15187543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15187964_15190648_15190856_15198817
ES.14354.4	chr17	-	4094	1	Intergenic	novelGene_12009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	15195720	15191626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15191600_15195700
ES.14354.5	chr17	-	4301	1	Intergenic	novelGene_12010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGACAGGTGAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	15197463	15193162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15193200_15197500
ES.14354.6	chr17	-	6127	2	NNC	ENSMUSG00000116780.2	novel	459	3	NA	NA	-14580	-10855	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAGGCATTGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	15213632	15195358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15198837_15210983
ES.14354.7	chr17	-	2168	1	NIC	ENSMUSG00000116780.2	novel	712	4	NA	NA	44	-12337	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATAAATCATGTGACTA	NA	False	NA	NA	False	AATAAA	-15	NA	15199008	15196840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15196800_15199000
ES.14354.8	chr17	-	492	2	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGTTCTTTGGAAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	15213137	15201654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15202006_15212996
ES.14354.9	chr17	-	591	3	Antisense	novelGene_ENSMUSG00000116953.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	55	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTAACGGGTTCTTTG	NA	False	NA	NA	False	AATAAA	-42	NA	15213132	15201661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15202006_15208742_15208854_15212996
ES.14355.1	chr17	-	3950	3	NIC	ENSMUSG00000079710.11	novel	747	5	NA	NA	10	0	intron_retention	FALSE	canonical	3	27	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGCCTCGTGTTAC	8888	False	NA	NA	False	AATAAA	-13	NA	15230421	15216048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15219560_15222241_15222449_15230189
ES.14355.2	chr17	-	753	4	FSM	ENSMUSG00000079710.11	ENSMUST00000179539.9	752	4	28	-29	15	0	multi-exon	TRUE	canonical	3	14	junction_1	7.25718035235908	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGCCTCGTGTTAC	8893	False	NA	NA	False	AATAAA	-13	NA	15230416	15216048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15216212_15219403_15219560_15222241_15222449_15230189
ES.14355.3	chr17	-	6820	1	NIC	ENSMUSG00000079710.11	novel	747	5	NA	NA	7562	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGAGCCTCGTGTTA	NA	False	NA	NA	False	AATAAA	-12	NA	15222869	15216049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15216000_15222900
ES.14355.4	chr17	-	1521	1	FSM	ENSMUSG00000079710.11	ENSMUST00000232299.2	2253	1	462	270	462	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTCTCTCAAGCATATG	9340	False	NA	NA	False	ATTAAA	-14	NA	15229969	15228448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15228400_15230000
ES.14355.5	chr17	-	1288	1	FSM	ENSMUSG00000079710.11	ENSMUST00000232299.2	2253	1	8	957	8	-957	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGAGCAAGGCATCTT	8886	False	NA	NA	False	AGTAAA	-16	NA	15230423	15229135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15229100_15230400
ES.14356.1	chr17	-	5236	1	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCATGCTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	15244755	15239519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15239500_15244800
ES.14356.2	chr17	-	1217	2	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCATGCTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	15244491	15239519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15240222_15243976
ES.14356.3	chr17	-	788	2	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	0	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAAAGCATGCTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	15244451	15239520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15240222_15244364
ES.14356.4	chr17	-	854	3	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	3.5	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATAAAGCATGCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	15244457	15239521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15240222_15243976_15244038_15244364
ES.14356.5	chr17	-	2076	1	Antisense	novelGene_ENSMUSG00000116895.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTAGATTAGTCATCTT	NA	False	NA	NA	False	NA	NA	NA	15243316	15241240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15241200_15243300
ES.14356.6	chr17	-	1991	1	Intergenic	novelGene_12011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTCTGTTCGTGATT	NA	False	NA	NA	False	NA	NA	NA	15244822	15242831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15242800_15244800
ES.14356.7	chr17	-	1307	2	Intergenic	novelGene_12012	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCATTCTGTTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	15244470	15242836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15244038_15244364
ES.14356.8	chr17	-	966	2	Intergenic	novelGene_12013	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATGTAATTTATGTCA	NA	False	NA	NA	False	NA	NA	NA	15244495	15243202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15244038_15244364
ES.14357.1	chr17	-	417	2	Antisense	novelGene_ENSMUSG00000036552.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGTTCTTTGGAAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	15273620	15264401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15264753_15273554
ES.14357.2	chr17	-	811	2	Antisense	novelGene_ENSMUSG00000036552.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCATGCTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	15273014	15270824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15271527_15272905
ES.14358.1	chr17	-	5394	1	Intergenic	novelGene_12017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTGTTGTGTGATATT	NA	False	NA	NA	False	NA	NA	NA	15345547	15340153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15340200_15345500
ES.14359.1	chr17	+	2764	2	Intergenic	novelGene_12019	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCCAAACCTCTTACAGA	820	False	NA	NA	False	AATAAA	-22	NA	15397098	15400486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15399550_15400173
ES.1436.1	chr1	+	175	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCAGTCATA	NA	False	NA	NA	False	NA	NA	NA	135324603	135324778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135324600_135324800
ES.14360.1	chr17	-	1499	4	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	-18	4	intron_retention	FALSE	canonical	1	1	junction_3	18.5711843695788	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	0	True	GATAAA	-20	NA	15461063	15451838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15453145_15454190_15454265_15460531_15460624_15461036
ES.14360.10	chr17	-	4232	2	ISM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	30	4598	30	-4598	5prime_fragment	FALSE	canonical	3	56	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGATCTCCGCTGCTC	NA	False	NA	NA	False	AGTAAA	-22	NA	15461015	15456444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15460624_15460962
ES.14360.11	chr17	-	705	4	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	31	-4724	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	16.779617264871	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAGAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	15461014	15456570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15456884_15457287_15457536_15460531_15460624_15460962
ES.14360.12	chr17	-	4125	2	ISM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	11	4724	11	-4724	5prime_fragment	FALSE	canonical	3	56	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAGAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	15461034	15456570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15460624_15460962
ES.14360.2	chr17	-	1185	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	2	-8	2	4	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	0	True	GATAAA	-20	NA	15461043	15451838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
ES.14360.3	chr17	-	2564	3	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	31	-2	intron_retention	FALSE	canonical	3	45	junction_1	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCTTTTCTTTCTTT	NA	False	NA	-6	True	GATAAA	-14	NA	15461014	15451844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15454265_15460531_15460624_15460962
ES.14360.4	chr17	-	8363	4	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	31	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	23.0988215187606	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCTTTTCTTTCTTT	NA	False	NA	-6	True	GATAAA	-14	NA	15461014	15451844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15452674_15453041_15457846_15457945_15460624_15460962
ES.14360.5	chr17	-	1189	5	NNC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.4805904575746	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTCTTTTCTTTCTT	NA	False	NA	-7	True	GATAAA	-13	NA	15461045	15451845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15452674_15453032_15453145_15454190_15454265_15460531_15460624_15460962
ES.14360.6	chr17	-	2859	3	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	100	1	intron_retention	FALSE	canonical	0	0	junction_2	16.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTCTTTTCTTTCTT	NA	False	NA	-7	True	GATAAA	-13	NA	15460945	15451845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15453145_15454190_15454265_15459459
ES.14360.7	chr17	-	7768	3	NIC	ENSMUSG00000097624.3	novel	1179	5	NA	NA	46	0	intron_retention	FALSE	canonical	3	33	junction_1	11.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTCTCTTTTCTTTCT	NA	False	NA	-8	True	GATAAA	-12	NA	15460999	15451846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15453145_15454190_15460624_15460962
ES.14360.8	chr17	-	2516	4	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	2	-2942	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	16.779617264871	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAGGCATTGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	15461043	15454788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15456884_15457287_15457536_15460531_15460624_15460962
ES.14360.9	chr17	-	3863	3	NNC	ENSMUSG00000097624.3	novel	1218	5	NA	NA	3	-4590	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	17	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCTGCTCATCTTTCT	NA	False	NA	NA	False	AGTAAA	-30	NA	15461042	15456436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15456884_15457287_15460624_15460962
ES.14361.1	chr17	+	1751	2	Antisense	novelGene_ENSMUSG00000097624.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTCATTCATTG	NA	False	NA	8	True	NA	NA	NA	15461181	15463987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_15461391_15462445
ES.14362.1	chr17	-	3727	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	-146	0	-146	0	multi-exon	FALSE	canonical	2	3	junction_7	1.34536240470737	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGACTTTTTAG	NA	False	NA	NA	False	AATAAA	-16	NA	15596384	15587615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
ES.14363.1	chr17	+	2581	1	Genic_Genomic	ENSMUSG00000014763.9	novel	NA	NA	NA	NA	-37	-10108	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCCCATCTTAATGACA	NA	False	NA	NA	False	NA	NA	NA	15616426	15619007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_15616400_15619000
ES.14363.10	chr17	+	2934	11	NNC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	30	-1402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.4502595132406	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTCATTAGTCTTTGAA	NA	False	NA	3	True	ATTAAA	-17	NA	15616539	15652298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637975_15643134_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.11	chr17	+	7843	1	NIC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	30	-4733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGTTTTTTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	15616539	15624382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15616500_15624400
ES.14363.12	chr17	+	1621	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	98	30334	52	-5749	5prime_fragment	FALSE	canonical	3	53	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCGAGTCTGAGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	15616561	15623366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15616823_15622006
ES.14363.13	chr17	+	3014	12	NNC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	52	-1398	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5114028986138	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	7	True	ATTAAA	-21	NA	15616561	15652302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15616823_15617011_15617102_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.14	chr17	+	4059	13	NNC	ENSMUSG00000014763.9	novel	5787	11	NA	NA	65	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.7003184681076	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACTGTGTTGATGGAAT	NA	False	NA	NA	False	AATAAA	-33	NA	15616574	15653709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15616823_15622006_15622862_15622950_15623008_15624445_15624660_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.15	chr17	+	8031	9	NIC	ENSMUSG00000014763.9	novel	5787	11	NA	NA	295	-3	intron_retention	FALSE	canonical	3	14	junction_5	12.8834923448574	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCACTTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	15616804	15653842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15616823_15622006_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.16	chr17	+	4193	9	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	8176	-140	974	-5	3prime_fragment	FALSE	canonical	3	14	junction_4	8.82822179150479	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTCACTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	15624639	15653840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.2	chr17	+	2975	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	47	1398	1	-1398	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	7	True	ATTAAA	-21	NA	15616510	15652302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.3	chr17	+	1684	1	NIC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	6	-10916	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCCACAGCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	15616515	15618199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15616500_15618200
ES.14363.4	chr17	+	4497	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	63	-140	17	-5	multi-exon	FALSE	canonical	2	12	junction_2	12.6526677028997	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTCACTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	15616526	15653840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.5	chr17	+	4213	11	FSM	ENSMUSG00000014763.9	ENSMUST00000231274.2	5787	11	22	1552	22	-1407	multi-exon	FALSE	canonical	1	1	junction_2	14.1350627872677	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCAAGTCATTAGTCT	NA	False	NA	-2	True	ATTAAA	-12	NA	15616531	15652293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15616823_15622006_15624660_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ES.14363.6	chr17	+	2667	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	68	29318	22	-4733	5prime_fragment	FALSE	canonical	3	53	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGTTTTTTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	15616531	15624382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15616823_15622006
ES.14363.8	chr17	+	3357	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	69	28627	23	-4042	5prime_fragment	FALSE	canonical	3	53	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTCATTAAGACTCC	NA	False	NA	NA	False	AATAAA	-24	NA	15616532	15625073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15616823_15622006
ES.14363.9	chr17	+	4135	10	NIC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	26	-1398	intron_retention	FALSE	canonical	2	12	junction_2	13.101691531541	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAGTCTTTGAACTCA	NA	False	NA	7	True	ATTAAA	-21	NA	15616535	15652302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15644641_15646450_15646538_15651838_15651891_15652028
ES.14364.1	chr17	+	159	1	Intergenic	novelGene_12020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	15686853	15687012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15686900_15687000
ES.14365.1	chr17	-	1758	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGCTGCACTAGTTG	NA	False	NA	NA	False	NA	NA	NA	15718560	15695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ES.14365.10	chr17	-	4079	1	NIC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	-1448	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	5854	False	NA	-13	True	ATTAAA	-15	NA	15700299	15696220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15696200_15700300
ES.14365.11	chr17	-	4457	5	ISM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	-8	938	-8	0	intron_retention	FALSE	canonical	3	4315	junction_4	325.377088929138	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718568	15696220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677
ES.14365.12	chr17	-	1178	6	FSM	ENSMUSG00000014769.11	ENSMUST00000232500.2	1435	6	14	243	14	-1	multi-exon	FALSE	canonical	1	85	junction_5	1937.38312163599	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTTCTTACACTGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	15719999	15696221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15719494
ES.14365.14	chr17	-	904	7	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	2320.32452232202	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTTCTTACACTGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	15718550	15696221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15696468_15697576_15697684_15710417_15710548_15712943_15713039_15713359_15713442_15714677_15714786_15718414
ES.14365.2	chr17	-	1454	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	0	304	0	-304	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATACA	-18	NA	15718560	15695586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ES.14365.20	chr17	-	4737	4	NIC	ENSMUSG00000014769.11	novel	1970	5	NA	NA	1	-3	intron_retention	FALSE	canonical	3	4315	junction_2	371.510729619243	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCATTTTCTTACACTG	NA	False	NA	-16	True	ATTAAA	-12	NA	15718559	15696223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15697684_15710417_15713442_15714677_15714786_15718414
ES.14365.22	chr17	-	1914	5	FSM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	50	6	9	-6	multi-exon	FALSE	canonical	3	4315	junction_3	328.285698744249	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACTCATTTTCTTACA	NA	False	NA	-19	True	ATTAAA	-9	NA	15718551	15696226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ES.14365.4	chr17	-	1109	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	-34	683	7	13	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGATATATTTATTTAT	NA	False	NA	-6	True	AATATA	-15	NA	15718594	15695965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ES.14365.6	chr17	-	1021	6	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	10	-20	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_3	1975.93578843038	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACCACTAATAT	NA	False	NA	-41	True	NA	NA	NA	15718550	15696000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15696468_15697576_15697684_15710417_15710539_15713359_15713442_15714677_15714786_15718414
ES.14365.7	chr17	-	853	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	-22	927	19	11	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTTCTCTAAGC	NA	False	NA	-2	True	ATTAAA	-26	NA	15718582	15696209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ES.14365.9	chr17	-	3632	5	NIC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	4315	junction_3	337.796073837456	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15696468_15697576_15697684_15710417_15713442_15714677_15714786_15718414
ES.14366.1	chr17	+	1893	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	-2	0	-2	0	multi-exon	TRUE	canonical	3	123	junction_2	77.8728932299295	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720147	15737689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.10	chr17	+	1896	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	107.763229258625	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTGTTTGCTTGTC	NA	False	NA	19	True	AAGAAA	-27	NA	15720186	15737685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.11	chr17	+	1828	9	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	3	-16	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	132.335688213724	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720186	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15723226_15723391_15724535_15724910_15726633_15726673_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.12	chr17	+	3833	7	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	87	junction_2	98.739415747827	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTGCTTGTCTG	NA	False	NA	21	True	AAGAAA	-29	NA	15720186	15737687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15735973_15736965
ES.14366.13	chr17	+	2981	8	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	3	-15	intron_retention	FALSE	canonical	1	5	junction_2	104.003728347613	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGAGACCATTGTTTT	NA	False	NA	8	True	AAGAAA	-16	NA	15720192	15737674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15723223_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.14	chr17	+	4942	6	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	-16	intron_retention	FALSE	canonical	3	87	junction_1	100.65386232033	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720192	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15735973_15736965
ES.14366.15	chr17	+	1856	9	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.028108954454	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGCCTGAGACCATT	NA	False	NA	3	True	AAGAAA	-11	NA	15720193	15737669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721541_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.16	chr17	+	1907	10	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	4	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116.787344993442	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTGAGACCATTGT	NA	False	NA	5	True	AAGAAA	-13	NA	15720193	15737671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721415_15721465_15721541_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.17	chr17	+	1702	11	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	5	239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.029586043377	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720194	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721415_15721465_15721552_15721620_15723223_15723391_15724535_15724910_15726633_15726673_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.18	chr17	+	1740	9	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	6	236	intron_retention	FALSE	non_canonical	0	0	junction_4	120.958089332628	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTGTTGTTTTTCT	NA	False	NA	6	True	AGTAAA	-8	NA	15720195	15737433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727608_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.2	chr17	+	3078	8	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	0	-18	intron_retention	FALSE	canonical	3	123	junction_2	82.0912881604177	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTGAGACCATTGT	NA	False	NA	5	True	AAGAAA	-13	NA	15720162	15737671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15735973_15736965
ES.14366.20	chr17	+	1842	9	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	121.53131026612	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720195	15737689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.21	chr17	+	5588	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	46	-3743	6	3743	multi-exon	FALSE	canonical	3	123	junction_2	77.8728932299295	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGGTGTCTATGTACT	NA	False	NA	NA	False	AATAAA	-17	NA	15720195	15741432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.22	chr17	+	1540	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	49	11205	9	239	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720198	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.23	chr17	+	2870	8	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	12	239	intron_retention	FALSE	canonical	3	87	junction_1	85.9499142239365	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720201	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.24	chr17	+	1418	8	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	12	239	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	121.439831410708	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720201	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ES.14366.25	chr17	+	3951	10	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	12	1831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	148.57678731348	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGGAGGAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	15720201	15739520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720489_15721415_15721465_15721552_15721632_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.26	chr17	+	1658	8	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	13	-12	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	121.439831410708	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGACCATTGTTTTGTT	NA	False	NA	11	True	AAGAAA	-19	NA	15720202	15737677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ES.14366.27	chr17	+	1861	10	NIC	ENSMUSG00000014767.18	novel	1891	9	NA	NA	13	-16	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	127.046020630418	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720202	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15726633_15726673_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.28	chr17	+	3476	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	58	-1643	-14	1643	multi-exon	FALSE	canonical	3	123	junction_2	77.8728932299295	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCCTTTTATCCTTACT	NA	False	NA	NA	False	NA	NA	NA	15720207	15739332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.29	chr17	+	2009	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-12	-16	intron_retention	FALSE	canonical	3	12	junction_5	130.2042080828	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720209	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15726633_15726673_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.3	chr17	+	1611	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	27	253	3	239	multi-exon	FALSE	canonical	3	123	junction_2	77.8728932299295	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720176	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.30	chr17	+	1850	9	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-11	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.028108954454	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720210	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721534_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.31	chr17	+	3337	10	NNC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-10	8979	intron_retention	FALSE	canonical	0	0	junction_8	133.37999183619	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTCAAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	15720211	15757620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15749343_15749538_15755737
ES.14366.33	chr17	+	3707	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-8	1831	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	123.389176546766	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGGAGGAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	15720213	15739520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723223_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.34	chr17	+	3385	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	64	9345	-8	1607	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAAGGTCTCCATTAAA	NA	False	NA	NA	False	NA	NA	NA	15720213	15739296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.4	chr17	+	1815	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	27	10952	3	0	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720176	15737689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.5	chr17	+	3631	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	32	9131	-2	1821	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGCAACTTTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	15720181	15739510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.6	chr17	+	3127	8	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	-2	-16	intron_retention	FALSE	canonical	3	87	junction_1	85.9499142239365	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGACCATTGTTT	NA	False	NA	7	True	AAGAAA	-15	NA	15720181	15737673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.7	chr17	+	1923	11	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	132.800640058699	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTGAGACCATTGT	NA	False	NA	5	True	AAGAAA	-13	NA	15720184	15737671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15726633_15726673_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.8	chr17	+	1647	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	3	239	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	107.763229258625	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTGTTTTTCTAGT	NA	False	NA	9	True	AGTAAA	-11	NA	15720186	15737436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ES.14366.9	chr17	+	1619	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	15	18	3	-18	multi-exon	FALSE	canonical	2	10	junction_5	125.630963097832	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTGAGACCATTGT	NA	False	NA	5	True	AAGAAA	-13	NA	15720186	15737671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ES.14367.1	chr17	-	10857	2	Antisense	novelGene_ENSMUSG00000014767.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGCATTTACTAAGCA	NA	False	NA	NA	False	TTTAAA	-32	NA	15733824	15721822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15723389_15724533
ES.14367.2	chr17	-	6085	3	Antisense	novelGene_ENSMUSG00000014767.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGCATTTACTAAGCA	NA	False	NA	NA	False	TTTAAA	-32	NA	15735151	15721822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15723389_15724533_15727691_15733789
ES.14367.3	chr17	-	2063	4	Antisense	novelGene_ENSMUSG00000014767.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGCATTTACTAAGCA	NA	False	NA	NA	False	TTTAAA	-32	NA	15733824	15721822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15723389_15724533_15724910_15727604_15727691_15733789
ES.14368.1	chr17	-	169	1	Antisense	novelGene_ENSMUSG00000014767.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGTAC	NA	False	NA	NA	False	NA	NA	NA	15739024	15738855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15738900_15739000
ES.14369.1	chr17	-	4363	3	NIC	ENSMUSG00000014771.14	novel	670	4	NA	NA	10	-4	intron_retention	FALSE	canonical	3	817	junction_2	13	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTCAGTACCTCAT	NA	False	NA	-18	True	NA	NA	NA	15747553	15741840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15745663_15746634_15746875_15747252
ES.14369.10	chr17	-	1184	5	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	-4	-24	intron_retention	FALSE	canonical	3	811	junction_2	23.0217288664427	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747547	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
ES.14369.11	chr17	-	1172	6	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	9	-24	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	424.452871353228	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747554	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15742056_15742177_15742292_15743056_15743169_15745530_15745663_15746634_15746875_15747157
ES.14369.12	chr17	-	1079	7	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	8	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	409.267129553954	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747555	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747157_15747366_15747451
ES.14369.14	chr17	-	1982	4	FSM	ENSMUSG00000014771.14	ENSMUST00000139610.8	670	4	-226	-1086	-9	-24	multi-exon	FALSE	canonical	3	811	junction_1	13.8884444373331	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747572	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15743169_15745530_15745663_15746634_15746875_15747252
ES.14369.15	chr17	-	1845	5	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	6	-24	intron_retention	FALSE	canonical	3	811	junction_2	65.3466716826496	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747557	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15742056_15742177_15743169_15745530_15745663_15746634_15746875_15747252
ES.14369.16	chr17	-	2932	3	NIC	ENSMUSG00000014771.14	novel	670	4	NA	NA	-7	-24	intron_retention	FALSE	canonical	3	811	junction_1	3	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747550	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15743169_15745530_15746875_15747252
ES.14369.17	chr17	-	893	4	FSM	ENSMUSG00000014771.14	ENSMUST00000139610.8	670	4	-214	-9	3	9	multi-exon	FALSE	canonical	3	811	junction_1	13.8884444373331	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCATGAC	NA	False	NA	NA	False	CATAAA	-17	NA	15747560	15742955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15743169_15745530_15745663_15746634_15746875_15747252
ES.14369.2	chr17	-	1961	6	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	6	-4	intron_retention	FALSE	canonical	0	0	junction_2	432.755173279304	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCTCAGTACCTCAT	NA	False	NA	-18	True	NA	NA	NA	15747557	15741840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15742056_15742177_15743169_15744363_15744442_15745530_15745663_15746634_15746875_15747252
ES.14369.3	chr17	-	4448	3	NIC	ENSMUSG00000014771.14	novel	579	4	NA	NA	-6	8	intron_retention	FALSE	canonical	3	24	junction_2	409.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTTATGCCTCAGTA	NA	False	NA	-24	True	NA	NA	NA	15747549	15741846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15745663_15746634_15746875_15747157
ES.14369.4	chr17	-	1129	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	-21	12	-21	6	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAACTTATGCCTCAG	NA	False	NA	-26	True	NA	NA	NA	15747584	15741848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
ES.14369.6	chr17	-	1000	7	NNC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	325.810101473577	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAACTTAAATAAA	NA	False	NA	-47	True	NA	NA	NA	15747562	15741869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252_15747366_15747451
ES.14369.7	chr17	-	4811	3	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	-18	39	-18	-21	intron_retention	FALSE	canonical	3	869	junction_2	51.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATATAAAATAAAAACTTA	NA	False	NA	-53	True	NA	NA	NA	15747581	15741875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15742056_15742177_15742292_15743064
ES.14369.8	chr17	-	5299	2	NIC	ENSMUSG00000014771.14	novel	670	4	NA	NA	8	-24	intron_retention	FALSE	canonical	3	817	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATATAAAATAAAAAC	NA	False	NA	-56	True	NA	NA	NA	15747555	15741878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_15746875_15747252
ES.1437.1	chr1	+	1796	2	Antisense	novelGene_ENSMUSG00000041879.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGCAAAAAAAAAGA	9947	False	NA	NA	False	NA	NA	NA	135334786	135336789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135334883_135335089
ES.14370.1	chr17	-	176	1	Intergenic	novelGene_12021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAGATGACACGC	NA	False	NA	NA	False	NA	NA	NA	15753647	15753471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15753500_15753600
ES.14371.1	chr17	+	456	1	Antisense	novelGene_ENSMUSG00000051977.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4770	False	NA	NA	False	NA	NA	NA	15763402	15763858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_15763400_15763900
ES.14372.1	chr17	+	304	1	Intergenic	novelGene_12022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	2733	False	NA	NA	False	NA	NA	NA	15780302	15780606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15780300_15780600
ES.14373.1	chr17	-	370	3	ISM	ENSMUSG00000051977.17	ENSMUST00000139911.2	666	5	47	3882	15	65	5prime_fragment	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTTATGTTAGGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	15784569	15783012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_15783200_15783482_15783594_15784497
ES.14374.1	chr17	+	218	1	Intergenic	novelGene_12023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGATTGTCTAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	15791823	15792041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15791800_15792000
ES.14375.1	chr17	+	200	1	Intergenic	novelGene_12024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTGAGCCCATCAGA	NA	False	NA	NA	False	NA	NA	NA	15798615	15798815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15798600_15798800
ES.14376.1	chr17	-	151	1	Intergenic	novelGene_12025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAATAAAAATAAAA	6239	False	NA	NA	False	NA	NA	NA	15800848	15800697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15800700_15800800
ES.14377.1	chr17	+	164	1	Intergenic	novelGene_12026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	15801402	15801566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15801400_15801600
ES.14378.1	chr17	+	5707	2	NNC	ENSMUSG00000116924.2	novel	898	4	NA	NA	2157	-1328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTAGCTTCGTCTT	NA	False	NA	NA	False	NA	NA	NA	15854206	15860038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15854225_15854349
ES.14379.1	chr17	+	236	1	Intergenic	novelGene_12027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATTAGATATTTTCT	NA	False	NA	NA	False	AAGAAA	-8	NA	15878370	15878606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15878400_15878600
ES.1438.1	chr1	+	5323	1	Antisense	novelGene_ENSMUSG00000100620.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTATAAGTAGTACAT	NA	False	NA	NA	False	NA	NA	NA	135341428	135346751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135341400_135346800
ES.14380.1	chr17	+	174	1	Intergenic	novelGene_12029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	15911653	15911827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_15911700_15911800
ES.14381.1	chr17	-	2106	4	Intergenic	novelGene_12028	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15924807	15904375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15906046_15906767_15906874_15914814_15914948_15924610
ES.14382.1	chr17	+	6155	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-71	1832	-71	-1832	multi-exon	TRUE	canonical	3	278	junction_29	37.9898375240279	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGTTTACATTGTAC	NA	False	NA	NA	False	AATAAA	-36	NA	15925157	15991040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.10	chr17	+	4979	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-41	16476	-41	786	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	15925187	15976396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.12	chr17	+	7180	23	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-40	776	intron_retention	FALSE	canonical	0	0	junction_6	106.725423942482	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTAGCTTCTA	NA	False	NA	NA	False	AATAAA	-10	NA	15925188	15976386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15950895_15951010_15951483_15952115_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024
ES.14382.13	chr17	+	4548	29	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-39	-2394	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_28	73.8471515071115	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGGTTTATAGCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	15925189	15979203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15979042
ES.14382.14	chr17	+	7895	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-39	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.6951621740749	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	15925189	15992868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953302_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.15	chr17	+	4597	28	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	13668	-39	-2393	5prime_fragment	FALSE	canonical	3	287	junction_10	33.2209215650263	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTATAGCTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	15925189	15979204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843
ES.14382.17	chr17	+	4296	25	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-39	786	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_24	77.1481259223666	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	15925189	15976396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024
ES.14382.18	chr17	+	4438	29	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	12232	-39	-957	5prime_fragment	FALSE	canonical	3	287	junction_10	33.3757977814916	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCAGACTACCTCATCAA	NA	False	NA	NA	False	GATAAA	-28	NA	15925189	15980640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589
ES.14382.19	chr17	+	5056	33	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	6183	-39	5092	5prime_fragment	FALSE	canonical	3	278	junction_29	37.7525738981794	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTGGTATATAATATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	15925189	15986689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592
ES.14382.2	chr17	+	8012	36	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-70	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	68.917164118992	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15925158	15992876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951302_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.20	chr17	+	7410	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-39	545	-39	-545	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGCACACGACTTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	15925189	15992327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.22	chr17	+	6708	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-35	-1127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.9051960098566	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGATATGTGGGCTCC	NA	False	NA	NA	False	ATTAAA	-8	NA	15925193	15991745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945652_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978530_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.23	chr17	+	7234	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-18	700	-18	-700	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTTTTTTAAAAGGAA	NA	False	NA	NA	False	TATAAA	-25	NA	15925210	15992172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.24	chr17	+	3317	7	ISM	ENSMUSG00000023852.15	ENSMUST00000173159.2	1372	8	-68	-1063	-17	1063	intron_retention	FALSE	canonical	3	308	junction_1	30.926885103777	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCTCACAGCTCATTC	NA	False	NA	NA	False	AATAAA	-12	NA	15925211	15953233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010
ES.14382.25	chr17	+	9103	34	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-4	-1130	intron_retention	FALSE	canonical	1	1	junction_7	70.1807321839878	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15925224	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951302_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15987767_15988827_15989039_15990239
ES.14382.26	chr17	+	6995	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-4	925	-4	-925	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGACATTCCTCT	NA	False	NA	NA	False	AGTAAA	-21	NA	15925224	15991947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.27	chr17	+	6248	33	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-3	-1130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	70.4383526456823	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15925225	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978928_15985185_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.28	chr17	+	4795	24	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-3	776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.2984743973894	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTAGCTTCTA	NA	False	NA	NA	False	AATAAA	-10	NA	15925225	15976386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945666_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.29	chr17	+	4732	24	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-3	786	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	78.7778816126707	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	15925225	15976396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925366_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.3	chr17	+	6878	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-69	1107	-69	-1107	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTTTCTGCTGCATTC	NA	False	NA	NA	False	ATTAAA	-28	NA	15925159	15991765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.30	chr17	+	6633	37	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	0	-1130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	68.1132408584918	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15925228	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239_15990647_15990799
ES.14382.32	chr17	+	7008	36	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	0	-930	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	68.917164118992	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCTTCCTGTAGACATT	NA	False	NA	NA	False	AGTAAA	-16	NA	15925228	15991942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951302_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.35	chr17	+	4149	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	5	17260	-2	2	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTACAGCTACATT	NA	False	NA	NA	False	AATAAA	-17	NA	15925233	15975612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.36	chr17	+	7952	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.5141784819845	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15925233	15992876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15950973_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.38	chr17	+	6780	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-1	-1122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.0705997882025	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGTGGGCTCCTGTAG	NA	False	NA	NA	False	ATTAAA	-13	NA	15925234	15991750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927394_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.4	chr17	+	6418	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-59	1557	-59	-1557	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTCTTGATGGAATC	NA	False	NA	40	True	ATTAAA	-31	NA	15925169	15991315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.40	chr17	+	4595	24	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	0	786	intron_retention	FALSE	canonical	3	8	junction_23	78.4837165392589	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	15925235	15976396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024
ES.14382.41	chr17	+	7888	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.6951621740749	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGCTTGTCTGCTATG	NA	False	NA	NA	False	AATAAA	-23	NA	15925235	15992872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953267_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.42	chr17	+	6596	38	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	1	-1191	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	86.5599603445089	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTTACAGTACACAC	NA	False	NA	NA	False	AATATA	-1	NA	15925236	15991681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239_15991348_15991405_15991487_15991549
ES.14382.5	chr17	+	6962	37	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-50	-1130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.507896469087	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15925178	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15944805_15944932_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.50	chr17	+	3925	23	FSM	ENSMUSG00000023852.15	ENSMUST00000173311.8	4211	23	12	274	12	-274	multi-exon	FALSE	canonical	3	287	junction_10	32.9626949171081	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTCTATAGTTTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	15925247	15972980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583
ES.14382.51	chr17	+	5835	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	12	-1853	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	68.0685968531085	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGTTCACTTTCCAA	NA	False	NA	NA	False	AATAAA	-37	NA	15925247	15991019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925366_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.52	chr17	+	6640	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	13	-1130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.0705997882025	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15925248	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945656_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.53	chr17	+	6565	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	13	-1122	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	68.0685968531085	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGTGGGCTCCTGTAG	NA	False	NA	NA	False	ATTAAA	-13	NA	15925248	15991750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925366_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.55	chr17	+	4791	24	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	20	16603	13	659	5prime_fragment	FALSE	canonical	3	287	junction_10	32.2930227676305	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCCAGCTTAGGATGC	NA	False	NA	NA	False	ATTAAA	-14	NA	15925248	15976269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.56	chr17	+	6345	36	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	13	-1573	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	68.917164118992	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACACTTTTTAATGAT	NA	False	NA	24	True	ATTAAA	-15	NA	15925248	15991299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951302_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.57	chr17	+	6247	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	13	-1644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	69.051569016739	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGCTTCTTTTGAC	NA	False	NA	7	True	ATTAAA	-20	NA	15925248	15991228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989043_15990248
ES.14382.59	chr17	+	5909	35	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	14	-1857	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	68.6253115913032	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGACTTTGTTCACTTT	NA	False	NA	NA	False	AATAAA	-33	NA	15925249	15991015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.6	chr17	+	7970	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	-50	-4	-50	4	multi-exon	FALSE	canonical	3	278	junction_29	37.9898375240279	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15925178	15992876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.60	chr17	+	6558	35	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	19	-1121	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	69.9475396600786	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGGGCTCCTGTAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	15925254	15991751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15990239
ES.14382.61	chr17	+	4928	24	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-14	776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.7798246167477	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTAGCTTCTA	NA	False	NA	NA	False	AATAAA	-10	NA	15925265	15976386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15950973_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182
ES.14382.62	chr17	+	4090	25	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-10	786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.542655930888	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTCTATTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	15925269	15976396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945656_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024
ES.14382.65	chr17	+	6868	37	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	6	-1120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	86.8544395689679	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGGGCTCCTGTAGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	15925285	15991752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15974468_15974598_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.66	chr17	+	7539	34	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.845219015388	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	15925286	15992868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927198_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952900_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.68	chr17	+	8132	36	NNC	ENSMUSG00000023852.15	novel	1812	11	NA	NA	507	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.9057682488134	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	15925786	15992868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15926353_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.69	chr17	+	4984	29	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	1931	-1130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	73.6823366533247	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15927210	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980638_15990799
ES.14382.70	chr17	+	7192	34	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-13221	-1130	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_22	69.5866320294958	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15945575	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15976024_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.71	chr17	+	5779	31	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-7937	-1117	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	72.3772217083678	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCTCCTGTAGTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	15950859	15991755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980567_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.72	chr17	+	5451	29	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	26885	1121	-6683	-1121	3prime_fragment	FALSE	canonical	3	278	junction_22	38.8354718981374	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGGGCTCCTGTAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	15952113	15991751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.73	chr17	+	4699	29	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	26885	1873	-6683	-1873	3prime_fragment	FALSE	canonical	3	278	junction_22	38.8354718981374	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAAAATCACTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	15952113	15990999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.74	chr17	+	4923	29	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	26885	1649	-6683	-1649	3prime_fragment	FALSE	canonical	3	278	junction_22	38.8354718981374	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTTCTCAGGCTTCTT	NA	False	NA	2	True	ATTAAA	-15	NA	15952113	15991223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.75	chr17	+	6576	29	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	26885	-4	-6683	4	3prime_fragment	FALSE	canonical	3	278	junction_22	38.8354718981374	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTCTGCTATGTGAG	NA	False	NA	NA	False	AATAAA	-27	NA	15952113	15992876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.77	chr17	+	6219	28	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-5973	-1649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	75.1024174967397	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCTTCTCAGGCTTCTT	NA	False	NA	2	True	ATTAAA	-15	NA	15952823	15991223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15979042_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.78	chr17	+	6244	27	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	28017	0	-5551	0	3prime_fragment	FALSE	canonical	3	278	junction_20	38.7146288269318	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGCTTGTCTGCTATG	NA	False	NA	NA	False	AATAAA	-23	NA	15953245	15992872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.8	chr17	+	7946	36	NNC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	69.051569016739	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGCTTGTCTGCTATG	NA	False	NA	NA	False	AATAAA	-23	NA	15925186	15992872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989027_15990239
ES.14382.80	chr17	+	3733	18	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	42799	1130	-8999	-1130	3prime_fragment	FALSE	canonical	3	278	junction_11	41.0931088945083	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15968027	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.82	chr17	+	4083	12	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	51737	4	-61	-4	3prime_fragment	FALSE	canonical	3	278	junction_5	34.6157180177488	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAATGGCTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	15976965	15992868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ES.14382.84	chr17	+	4244	7	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	2087	-1861	intron_retention	FALSE	canonical	3	278	junction_1	25.0427412415033	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCAAGGACTTTGTTCA	NA	False	NA	NA	False	AATAAA	-29	NA	15979113	15991011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15989039_15990239
ES.14382.85	chr17	+	6499	4	NIC	ENSMUSG00000023852.15	novel	7916	36	NA	NA	3172	-1572	intron_retention	FALSE	canonical	3	281	junction_1	12.684198393627	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACACTTTTTAATGATT	NA	False	NA	25	True	ATTAAA	-16	NA	15980198	15991300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_15981670_15982643_15982785_15985104_15985284_15986592
ES.14382.86	chr17	+	1716	2	ISM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	63597	1130	11799	-1130	3prime_fragment	FALSE	canonical	3	348	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGGATATGTGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	15988825	15991742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_15989039_15990239
ES.14382.9	chr17	+	4259	23	FSM	ENSMUSG00000023852.15	ENSMUST00000173311.8	4211	23	-48	0	-41	0	multi-exon	FALSE	canonical	3	287	junction_10	32.9626949171081	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGGCATGTTTTCTGAC	NA	False	NA	NA	False	NA	NA	NA	15925187	15973254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583
ES.14383.1	chr17	-	7051	14	Antisense	novelGene_ENSMUSG00000023852.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGAAAGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	15987818	15966018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15967467_15968027_15968178_15969632_15969782_15970107_15970205_15970298_15970395_15972581_15972758_15975179_15977062_15977876_15978008_15978534_15978676_15978840_15978993_15980587_15981670_15982643_15982785_15985104_15985283_15986590
ES.14383.2	chr17	-	4904	3	Antisense	novelGene_ENSMUSG00000023852.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15972730	15966045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15968178_15969632_15969782_15970107
ES.14383.3	chr17	-	4246	17	Antisense	novelGene_ENSMUSG00000023852.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15988569	15966045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_15967467_15968027_15968178_15969632_15969782_15970107_15970205_15970298_15970395_15972581_15972758_15975179_15975343_15977020_15977062_15977876_15978008_15978534_15978676_15978840_15978993_15980587_15980712_15981539_15981670_15982643_15982785_15985104_15985284_15986592_15986688_15987709
ES.14383.4	chr17	-	156	1	Intergenic	novelGene_12030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	15971809	15971653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_15971700_15971800
ES.14384.1	chr17	+	6129	1	Intergenic	novelGene_12031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAACCTGCCTTACA	NA	False	NA	NA	False	NA	NA	NA	16030282	16036411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_16030300_16036400
ES.14384.2	chr17	+	3541	2	Antisense	novelGene_ENSMUSG00000048027.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCAACCTGCCT	NA	False	NA	NA	False	NA	NA	NA	16032830	16036407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_16036239_16036274
ES.14385.1	chr17	-	4362	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	31	1305	5	-4	multi-exon	FALSE	canonical	3	46	junction_1	3.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCTGTCTTTAAACGA	NA	False	NA	NA	False	AATAAA	-19	NA	16046817	16024754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_16028064_16040931_16041441_16046273
ES.14385.10	chr17	-	6865	2	ISM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	31	3635	5	-2334	intron_retention	FALSE	canonical	3	46	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGTTAGTATGTACAG	NA	False	NA	-9	True	ATTAAA	-13	NA	16046817	16027084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_16028064_16040931
ES.14385.11	chr17	-	2385	2	FSM	ENSMUSG00000048027.10	ENSMUST00000232638.2	2383	2	1	-3	1	3	multi-exon	FALSE	canonical	3	53	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTTTATAAATAACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	16046821	16039603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_16041441_16046273
ES.14385.4	chr17	-	9021	2	ISM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	31	1479	5	-178	intron_retention	FALSE	canonical	3	46	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGATGTTTGTTCTCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	16046817	16024928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_16028064_16040931
ES.14385.6	chr17	-	4176	5	NIC	ENSMUSG00000048027.10	novel	701	4	NA	NA	69	-181	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.6272207120495	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCGATGTTTGTTCTC	NA	False	NA	-8	True	AATAAA	-14	NA	16051078	16024931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_16028064_16040931_16041441_16046273_16046537_16049881_16049958_16050882
ES.14385.7	chr17	-	3586	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	-5	2117	-5	-816	multi-exon	FALSE	canonical	3	46	junction_1	3.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTTAGAGTGTGT	NA	False	NA	NA	False	AGTAAA	-21	NA	16046853	16025566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_16028064_16040931_16041441_16046273
ES.14385.9	chr17	-	2082	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	-19	3635	-19	-2334	multi-exon	FALSE	canonical	3	46	junction_1	3.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGTTAGTATGTACAG	NA	False	NA	-9	True	ATTAAA	-13	NA	16046867	16027084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_16028064_16040931_16041441_16046273
ES.14386.1	chr17	+	218	1	FSM	ENSMUSG00000116757.2	ENSMUST00000231695.2	798	1	619	-39	619	39	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTTAAAAAAAAATCCA	NA	False	NA	NA	False	AATATA	-6	NA	16778126	16778344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_16778100_16778300
ES.14387.1	chr17	+	202	1	Intergenic	novelGene_12032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTTTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	17116347	17116549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17116300_17116500
ES.14388.1	chr17	+	156	1	Intergenic	novelGene_12033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	2517	False	NA	NA	False	NA	NA	NA	17123887	17124043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17123900_17124000
ES.14389.1	chr17	-	185	1	Intergenic	novelGene_12034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGCCGGCTCACACC	NA	False	NA	NA	False	NA	NA	NA	17137533	17137348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17137300_17137500
ES.1439.1	chr1	-	6885	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	59	-697	-7	697	multi-exon	TRUE	canonical	3	518	junction_15	35.6964730086209	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTACCTGCTAGTGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	135358178	135309352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.100	chr1	-	4579	24	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_22	163.785245993933	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358174	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.103	chr1	-	3961	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	-4	2290	-4	-129	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAACCACAGAGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	135358241	135312339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.104	chr1	-	4027	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-4	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	161.892405756622	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGCTTGACCCATCTA	NA	False	NA	NA	False	AAGAAA	-29	NA	135358233	135312380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354664_135354780_135358005
ES.1439.108	chr1	-	3581	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	1	2665	1	144	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATGTGTTCAGTTAGG	NA	False	NA	NA	False	NA	NA	NA	135358236	135312714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.109	chr1	-	8009	21	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	5	117	intron_retention	FALSE	canonical	0	0	junction_19	209.906979398018	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATATCTGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	135358191	135312741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135318405_135319233_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135347023_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.11	chr1	-	6236	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	127.450394368063	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358237	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331127_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.111	chr1	-	3602	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-2	116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	195.83836872959	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCATATCTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	135358173	135312742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334313_135334494_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.112	chr1	-	6485	20	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	16	114	intron_retention	FALSE	canonical	3	530	junction_9	32.4772240670673	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCATATCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	135358213	135312744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135332061_135333558_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.114	chr1	-	3621	25	NNC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	8	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.437775369668	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTCAGGAGCACAGGAA	NA	False	NA	NA	False	NA	NA	NA	135358188	135312781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135320624_135320780_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.115	chr1	-	3380	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	28	2839	-13	-30	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAACTGTCTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	135358209	135312888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.116	chr1	-	3838	24	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	0	-33	intron_retention	FALSE	canonical	0	0	junction_22	165.172236392374	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGAACTGTCTTTCT	NA	False	NA	NA	False	TTTAAA	-45	NA	135358196	135312891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.117	chr1	-	3449	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-4	-33	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	126.86449910915	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGAACTGTCTTTCT	NA	False	NA	NA	False	TTTAAA	-45	NA	135358233	135312891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314373_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.118	chr1	-	3471	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	7	-37	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	160.057194638528	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATCTGGAACTGTCT	NA	False	NA	NA	False	TTTAAA	-41	NA	135358189	135312895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354661_135354780_135358005
ES.1439.12	chr1	-	6248	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	127.491813740681	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358189	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321819_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.120	chr1	-	3108	23	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	48	3540	7	-43	5prime_fragment	FALSE	canonical	3	518	junction_14	34.1253159704441	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGTTCGTCATTAGAA	NA	False	NA	NA	False	AATATA	-16	NA	135358189	135313589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.121	chr1	-	943	6	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	5	-920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.823808380067	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAACACACAAAATT	NA	False	NA	NA	False	NA	NA	NA	135358191	135322822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135322997_135336987_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.122	chr1	-	178	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135335080	135334902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135334900_135335100
ES.1439.13	chr1	-	8133	21	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	11	-5	intron_retention	FALSE	canonical	0	0	junction_14	135.530070464086	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358185	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334594_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.14	chr1	-	6327	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	160.057194638528	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358204	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354661_135354780_135358005
ES.1439.15	chr1	-	3745	8	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	218.998928335837	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358179	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314447_135347119_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.17	chr1	-	6189	24	NNC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.142998843859	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358196	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313730_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.19	chr1	-	6192	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	127.425295954725	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358179	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334313_135334487_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.2	chr1	-	6247	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTCAGTTTCAGT	NA	False	NA	-4	True	AATAAA	-21	NA	135358237	135310049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.20	chr1	-	5358	20	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.156421044772	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135358180	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314507_135319316_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.22	chr1	-	6175	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	127.318572500604	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTGTCTCCTGTCAG	NA	False	NA	-11	True	AATAAA	-14	NA	135358178	135310056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347806_135348025_135348092_135358005
ES.1439.24	chr1	-	5339	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	59	849	-7	-849	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGAGGTGTGGGCTCC	NA	False	NA	NA	False	AAGAAA	-13	NA	135358178	135310898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.25	chr1	-	5248	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	46	953	5	-953	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGAAGTTGAACTCTGGC	NA	False	NA	NA	False	NA	NA	NA	135358191	135311002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.26	chr1	-	4928	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	54	-793	-4	793	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCTAATGGTTTTGT	NA	False	NA	NA	False	AAAACA	-21	NA	135358175	135311417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.27	chr1	-	4771	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-2	790	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	172.674579475311	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTTGTCTAATGGTTT	NA	False	NA	NA	False	AAAACA	-18	NA	135358173	135311420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316377_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337218_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.3	chr1	-	6452	26	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	253.639820217568	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCCTGTCAGTTTCAG	NA	False	NA	-5	True	AATAAA	-20	NA	135358179	135310050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318401_135319233_135319383_135320624_135320780_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337128_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.30	chr1	-	4867	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	9	1371	1	790	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTTGTCTAATGGTTT	NA	False	NA	NA	False	AAAACA	-18	NA	135358228	135311420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.31	chr1	-	5347	24	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-4	788	intron_retention	FALSE	non_canonical	0	0	junction_22	198.682398949112	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAGTTGTCTAATGGT	NA	False	NA	NA	False	AAAACA	-16	NA	135358161	135311422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331885_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354669_135354780_135358005
ES.1439.32	chr1	-	4807	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-1	785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	127.425295954725	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTAAGTTGTCTAAT	NA	False	NA	NA	False	AAAACA	-13	NA	135358172	135311425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334313_135334494_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.33	chr1	-	4711	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	53	1483	12	678	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTCCAGTGGTACCCAA	NA	False	NA	NA	False	GATAAA	-16	NA	135358184	135311532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.34	chr1	-	4809	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-6	676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	194.721221664889	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTCCAGTGGTACCC	NA	False	NA	NA	False	GATAAA	-14	NA	135358177	135311534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334594_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.36	chr1	-	4658	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	-1	1590	-1	571	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATAGTTGTCTTCTG	NA	False	NA	NA	False	ACTAAA	-33	NA	135358238	135311639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.37	chr1	-	4711	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-2	571	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	160.057194638528	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATAGTTGTCTTCTG	NA	False	NA	NA	False	ACTAAA	-33	NA	135358173	135311639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354661_135354780_135358005
ES.1439.38	chr1	-	4658	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-5	571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	194.034719115477	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATAGTTGTCTTCTG	NA	False	NA	NA	False	ACTAAA	-33	NA	135358176	135311639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135347023_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.39	chr1	-	4278	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	-34	2003	-34	158	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTTTAAAGAGTCAGT	NA	False	NA	NA	False	NA	NA	NA	135358271	135312052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.4	chr1	-	6178	26	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.951885638042	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTCCTGTCAGTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	135358221	135310052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135310429_135310589_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.40	chr1	-	3075	15	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	10	90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.855945993221	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGCATCCTACTGTG	NA	False	NA	71	True	AGTAAA	-21	NA	135358186	135312120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135337155_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.41	chr1	-	4247	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	29	-87	-4	87	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTTTAGCATCCTACT	NA	False	NA	68	True	AGTAAA	-18	NA	135358200	135312123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.43	chr1	-	4271	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	-173	2149	-173	12	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAAGGTGTCTCAACAC	NA	False	NA	-7	True	AGTAAA	-31	NA	135358410	135312198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.45	chr1	-	3751	23	NIC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	128.988595818544	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358178	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.47	chr1	-	5666	22	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	518	junction_13	37.1760535414412	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358233	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.48	chr1	-	4407	23	NIC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	518	junction_14	36.4385875296646	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358195	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.49	chr1	-	5985	21	NNC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_17	136.035390615825	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358191	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337218_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.5	chr1	-	5781	22	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	132.334352880803	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTCCTGTCAGTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	135358179	135310052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.50	chr1	-	6536	23	NIC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	518	junction_14	36.1934940046476	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358196	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.51	chr1	-	4175	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	160.057194638528	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358208	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354661_135354780_135358005
ES.1439.53	chr1	-	4231	26	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	191.401834891936	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358208	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135353661_135353725_135354668_135354780_135358005
ES.1439.56	chr1	-	4061	24	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	126.424136864179	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358205	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347721_135347816_135348029_135348092_135358005
ES.1439.59	chr1	-	5605	22	NNC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_10	132.986180722053	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358166	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331019_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.60	chr1	-	4022	24	NNC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	127.425295954725	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358175	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334308_135334492_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.62	chr1	-	5477	5	NIC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	-2770	0	intron_retention	FALSE	canonical	3	585	junction_2	28.5087705802969	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135320301	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313742_135313956_135314545_135315111_135315246_135316248_135318405_135319233
ES.1439.63	chr1	-	3938	23	NIC	ENSMUSG00000041879.14	novel	4226	25	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	129.043469196038	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358176	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135348029_135348092_135358005
ES.1439.64	chr1	-	11661	23	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	56	junction_22	118.681635388599	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358175	135312210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135354780_135358005
ES.1439.66	chr1	-	5100	24	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_7	223.81960059518	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358175	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135320624_135320780_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.67	chr1	-	4014	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	173.158373479997	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358177	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331968_135332061_135333558_135333708_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.70	chr1	-	5337	22	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	518	junction_13	37.1462147444564	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358178	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.72	chr1	-	4841	23	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_6	176.280093849542	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358178	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317237_135318405_135319233_135319383_135321819_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.73	chr1	-	3965	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	127.139029032055	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358207	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327853_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.77	chr1	-	4108	4	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	585	junction_3	30.24345659257	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135317551	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111
ES.1439.78	chr1	-	2776	14	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	163.814550942802	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358179	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327853_135347733_135347816_135348029_135348092_135358005
ES.1439.79	chr1	-	4036	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	172.141751497699	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358176	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332064_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135357995
ES.1439.81	chr1	-	3940	23	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	129.945761094567	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358195	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.84	chr1	-	5456	23	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_21	168.288172760028	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358186	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.1439.85	chr1	-	4173	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	161.892405756622	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135358236	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348071_135354668_135354780_135358005
ES.1439.86	chr1	-	3740	22	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	132.932612120124	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTCTGCATACTCTA	NA	False	NA	-21	True	AGTAAA	-17	NA	135347804	135312212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316377_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728
ES.1439.87	chr1	-	4103	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	219.24680093954	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGTCTGCATACTCT	NA	False	NA	-22	True	AGTAAA	-16	NA	135358173	135312213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135348029_135348092_135353661_135353722_135354668_135354780_135358005
ES.1439.88	chr1	-	3973	23	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	1	16	junction_1	125.419206155705	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGTCTGCATACTCT	NA	False	NA	-22	True	AGTAAA	-16	NA	135358204	135312213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.89	chr1	-	3130	19	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.817914903775	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGTCTGCATACTCT	NA	False	NA	-22	True	AGTAAA	-16	NA	135358236	135312213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135313991_135319288_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.9	chr1	-	5829	7	NIC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-1778	-5	intron_retention	FALSE	canonical	3	585	junction_4	30.9968636406259	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTCTCCTGTCAGTT	NA	False	NA	-9	True	AATAAA	-16	NA	135319309	135310054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135318405_135319233
ES.1439.92	chr1	-	4069	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.220813504805	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358237	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313203_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.93	chr1	-	4139	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	125.88110632679	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358218	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331885_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.94	chr1	-	4006	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	126.922062029687	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358178	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334271_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.96	chr1	-	4038	24	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	171.21378095869	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358191	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331885_135331987_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.98	chr1	-	5518	23	NNC	ENSMUSG00000041879.14	novel	6247	24	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_3	129.8403024189	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358173	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314419_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ES.1439.99	chr1	-	3664	25	NNC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.045241002081	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTAGTCTGCATACTC	NA	False	NA	-23	True	AGTAAA	-15	NA	135358206	135312214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135312718_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ES.14390.1	chr17	+	182	1	Intergenic	novelGene_12035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACATAAG	NA	False	NA	NA	False	NA	NA	NA	17150262	17150444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17150300_17150400
ES.14391.1	chr17	+	183	1	Intergenic	novelGene_12036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	17157953	17158136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17158000_17158100
ES.14392.1	chr17	+	2141	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	-65	-478	-52	-2	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCCCAAGTGGCCTAC	NA	False	NA	22	True	NA	NA	NA	17171748	17194417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ES.14392.10	chr17	+	2366	1	Intergenic	novelGene_12040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCTAG	NA	False	NA	NA	False	NA	NA	NA	17200874	17203240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17200900_17203200
ES.14392.11	chr17	+	3267	4	Intergenic	novelGene_12041	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	94	junction_1	21.5458168149231	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGTATGCTGCTCTT	NA	False	NA	30	True	NA	NA	NA	17225018	17261817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225539_17257537_17257665_17257906_17257968_17259258
ES.14392.12	chr17	+	2863	4	Intergenic	novelGene_12042	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	56.3698106751793	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCGAGTATGCTGCTC	NA	False	NA	28	True	NA	NA	NA	17225270	17261815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225389_17257537_17257665_17257906_17257968_17259258
ES.14392.13	chr17	+	2649	4	Intergenic	novelGene_12043	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	56.3698106751793	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	5	True	NA	NA	NA	17225318	17261649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225389_17257537_17257665_17257906_17257968_17259258
ES.14392.14	chr17	+	2738	4	Intergenic	novelGene_12045	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	94	junction_1	21.5458168149231	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	5	True	NA	NA	NA	17225379	17261649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225539_17257537_17257665_17257906_17257968_17259258
ES.14392.15	chr17	+	2228	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-116297	59390	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	58.1248655912424	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTCTAAGGGATGCAAC	NA	False	NA	10	True	NA	NA	NA	17225379	17426483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17274215_17274293_17362997_17363125_17423325_17423387_17424679
ES.14392.16	chr17	+	2857	5	Intergenic	novelGene_12044	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	68.7872626290653	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTAAGGGATGCAA	NA	False	NA	3	True	NA	NA	NA	17225379	17261647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225539_17228557_17228679_17257537_17257665_17257906_17257968_17259258
ES.14392.17	chr17	+	1548	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-116295	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	101.903140285273	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17225381	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17362997_17363125_17363366_17363428_17364720_17365305_17366480
ES.14392.18	chr17	+	2662	7	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-116277	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	103.56479453302	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	False	NA	NA	False	NA	NA	NA	17225399	17367100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17274215_17274293_17281029_17281160_17362997_17363125_17363366_17363428_17364720_17366138_17366389
ES.14392.19	chr17	+	2280	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-58963	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	99.8591007369884	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17225411	17309890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.2	chr17	+	4425	1	NIC	ENSMUSG00000060149.8	novel	1964	3	NA	NA	15	-17686	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17171828	17176253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17171800_17176300
ES.14392.20	chr17	+	2773	9	Intergenic	novelGene_12046	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	60.1434483131787	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGTTTTCAGCATACT	NA	False	NA	NA	False	AATAAA	-13	NA	17225438	17262657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225539_17247918_17248017_17257537_17257665_17257906_17257968_17259258_17259615_17260037_17260507_17260590_17260960_17261043_17261312_17261732
ES.14392.21	chr17	+	2379	7	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-58932	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	98.0487407137672	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17225442	17309890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17281029_17281160_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.22	chr17	+	398	2	Intergenic	novelGene_12047	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTATTGTTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	17225456	17290256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17225539_17289940
ES.14392.24	chr17	+	2750	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-116200	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.295369450392	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCAACATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	17225476	17367106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17225539_17341233_17341348_17362997_17363125_17363366_17363428_17364720
ES.14392.25	chr17	+	4046	1	Intergenic	novelGene_12048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGAGATTCTTTTGT	2887	False	NA	NA	False	NA	NA	NA	17237803	17241849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17237800_17241800
ES.14392.26	chr17	+	7617	2	Intergenic	novelGene_12049	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTATGTATACATG	7849	False	NA	NA	False	NA	NA	NA	17242765	17257506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17247001_17254124
ES.14392.27	chr17	+	6400	4	Intergenic	novelGene_12050	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	65.7926034343274	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTAAGGGATGCAA	NA	False	NA	3	True	NA	NA	NA	17253495	17261647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17253882_17254100_17257665_17257906_17257968_17259258
ES.14392.28	chr17	+	2235	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-437	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	107.087627670053	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCAACATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	17283937	17309891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284019_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.29	chr17	+	2736	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-68	-1	-68	1	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCAACATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	17284306	17309891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ES.14392.3	chr17	+	1871	3	FSM	ENSMUSG00000060149.8	ENSMUST00000190415.2	1964	3	91	2	78	-2	multi-exon	FALSE	canonical	2	8	junction_1	11	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCCCAAGTGGCCTAC	NA	False	NA	22	True	NA	NA	NA	17171891	17194417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17171971_17191432_17191494_17192686
ES.14392.30	chr17	+	2484	5	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-68	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.1955224787385	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCAACATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	17284306	17309891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308923_17309174
ES.14392.31	chr17	+	2307	6	Fusion	ENSMUSG00000096696.2_ENSMUSG00000095990.2	novel	2667	4	NA	NA	-67	5	multi-exon	TRUE	non_canonical	0	0	junction_4	109.232595867717	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTCTAAGGGATGCAAC	NA	False	NA	NA	False	NA	NA	NA	17284307	17367098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17284469_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.32	chr17	+	2306	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-65	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	105.978110947497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17284309	17309884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.33	chr17	+	482	2	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-65	-19627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTTGTTTTTTGGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	17284309	17290263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17289940
ES.14392.34	chr17	+	5750	2	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-63	-19636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTATTGTTTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	17284311	17290254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17285808_17286000
ES.14392.35	chr17	+	590	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-63	2140	-63	-2140	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCTATGAATGTAAT	NA	False	NA	NA	False	NA	NA	NA	17284311	17307750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ES.14392.36	chr17	+	2416	5	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.651197463019	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17284323	17309890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284419_17305782_17305910_17306151_17306213_17307505_17308923_17309174
ES.14392.37	chr17	+	2207	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-49	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	105.978110947497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17284325	17309884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308024_17308107_17308762_17309180
ES.14392.38	chr17	+	2125	4	Fusion	ENSMUSG00000096696.2_ENSMUSG00000095990.2	novel	2667	4	NA	NA	-38	59391	multi-exon	FALSE	canonical	3	115	junction_3	38.4013888637725	568	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17284336	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17284469_17362997_17363125_17423325_17423387_17424679
ES.14392.39	chr17	+	2274	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-35	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	105.978110947497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTAAGGGATGCAA	NA	False	NA	NA	False	NA	NA	NA	17284339	17309882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308923_17309258_17309519_17309602
ES.14392.4	chr17	+	2826	4	NNC	ENSMUSG00000060149.8	novel	1598	4	NA	NA	78	67398	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_3	2.62466929133727	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGAGTATGCTGCTCTT	NA	False	NA	30	True	NA	NA	NA	17171891	17261817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17171971_17257537_17257665_17257906_17257968_17259258
ES.14392.40	chr17	+	2257	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-35	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.867325914755	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTGGGTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	17284339	17309915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284419_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.41	chr17	+	2855	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	-28	-160	-28	160	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGAGTATGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	17284346	17310050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ES.14392.42	chr17	+	1760	5	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	-28	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	95.1955224787385	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACCTTCTAAGGGATGC	NA	False	NA	NA	False	NA	NA	NA	17284346	17309880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308495_17309419
ES.14392.43	chr17	+	5403	6	Fusion	ENSMUSG00000096696.2_ENSMUSG00000095990.2	novel	2667	4	NA	NA	11	3178	multi-exon	TRUE	non_canonical	0	0	junction_4	109.232595867717	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAAGGTCAGTTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	17284385	17370271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17284469_17362997_17363125_17363366_17363428_17364720_17366138_17366472_17366734_17366817
ES.14392.44	chr17	+	2395	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	12	160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	105.978110947497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGAGTATGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	17284386	17310050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308915_17309250_17309519_17309602
ES.14392.45	chr17	+	1418	5	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	13	25	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	95.1955224787385	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTGGGTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	17284387	17309915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17308351_17309611
ES.14392.46	chr17	+	975	6	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	15	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	105.978110947497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17284389	17309884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505_17307730_17308139_17308258_17309518
ES.14392.47	chr17	+	2322	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-56974	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.850972280083	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACCTTCTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	17284702	17367093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17284884_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.48	chr17	+	2193	2	NNC	ENSMUSG00000096696.2	novel	2667	4	NA	NA	23232	161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGAGTATGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	17307606	17310051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17308923_17309174
ES.14392.49	chr17	+	687	3	Fusion	ENSMUSG00000096696.2_ENSMUSG00000095990.2	novel	2667	4	NA	NA	24819	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACCTTCTAAGGGATGC	NA	False	NA	NA	False	NA	NA	NA	17309193	17367095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17309335_17366465_17366734_17366817
ES.14392.5	chr17	+	1724	1	Intergenic	novelGene_12038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAATG	9751	False	NA	NA	False	NA	NA	NA	17189035	17190759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17189000_17190800
ES.14392.50	chr17	+	3005	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	-309	-12	-309	12	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17341367	17367105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
ES.14392.51	chr17	+	3199	7	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-97	5606	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	107.197636789872	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGAGCATGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	17341579	17372699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341590_17341650_17341907_17362997_17363125_17363366_17363428_17364720_17364897_17368123_17368169_17370175
ES.14392.52	chr17	+	2334	7	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-95	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.69522128357	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATAGTGGGTGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	17341581	17367129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341590_17341650_17341800_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.53	chr17	+	2883	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-40	6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	97.2638164992511	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17341636	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17342063_17342217_17362997_17363125_17363366_17363428_17364720
ES.14392.55	chr17	+	2847	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	11	-174	11	174	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTATGCTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	17341687	17367267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
ES.14392.56	chr17	+	2428	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	12	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	106.167320772449	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGGGATGCAACATA	NA	False	NA	NA	False	NA	NA	NA	17341688	17367101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720_17366138_17366389
ES.14392.57	chr17	+	2259	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	13	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	117.263122933001	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGGGATGCAACATA	NA	False	NA	NA	False	NA	NA	NA	17341689	17367101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720_17366138_17366473_17366734_17366817
ES.14392.58	chr17	+	6134	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	27	3897	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.263122933001	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTCCTATGGATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	17341703	17370990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.59	chr17	+	390	2	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	41	-19692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTATTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	17341717	17347401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17347093
ES.14392.6	chr17	+	3751	3	ISM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	17518	-480	-3840	0	3prime_fragment	FALSE	canonical	3	30	junction_2	5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCAAGTGGCCTACTC	NA	False	NA	24	True	NA	NA	NA	17189331	17194419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_17191289_17191432_17191494_17192686
ES.14392.60	chr17	+	2597	4	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	43	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.016515287892	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17341719	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341750_17362997_17363125_17363366_17363428_17364720
ES.14392.61	chr17	+	2434	8	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	44	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.837513265811	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17341720	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17357281_17357381_17359471_17359581_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.62	chr17	+	2378	7	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	44	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.167637266512	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTCTAAGGGATGCAAC	NA	False	NA	NA	False	NA	NA	NA	17341720	17367098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17342063_17342217_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.63	chr17	+	2317	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	44	59558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.6088833028763	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAAGTATGCTGCTCT	NA	False	NA	22	True	NA	NA	NA	17341720	17426651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17380293_17380372_17422956_17423084_17423325_17423387_17424679
ES.14392.64	chr17	+	2252	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	44	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.850972280083	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTAAGGGATGCAA	NA	False	NA	NA	False	NA	NA	NA	17341720	17367097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17362969_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.65	chr17	+	2766	5	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	54	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.123836248174	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACCTTCTAAGGGATGC	NA	False	NA	NA	False	NA	NA	NA	17341730	17367095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17341800_17342068_17342203_17362997_17363125_17363366_17363428_17364720
ES.14392.66	chr17	+	2344	6	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	211	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.850972280083	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17341887	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17342085_17362997_17363125_17363366_17363428_17364720_17366130_17366465_17366734_17366817
ES.14392.67	chr17	+	2991	4	Intergenic	novelGene_12056	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	89.8455464796237	435	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17362005	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17362194_17422146_17423084_17423325_17423387_17424679
ES.14392.68	chr17	+	2567	3	ISM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	21319	-4	21319	4	3prime_fragment	FALSE	canonical	3	169	junction_2	50	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTAAGGGATGCAA	NA	False	NA	NA	False	NA	NA	NA	17362995	17367097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_17363125_17363366_17363428_17364720
ES.14392.69	chr17	+	2147	3	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	21332	59556	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_2	5	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17363008	17426649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17363125_17423325_17423387_17424679
ES.14392.7	chr17	+	2698	4	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	-151191	59391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.7156650905785	730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17190485	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17190666_17362472_17363125_17423325_17423387_17424679
ES.14392.70	chr17	+	2124	3	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	23045	172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGAGTATGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	17364721	17367265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17366130_17366465_17366734_17366817
ES.14392.71	chr17	+	1571	2	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	23360	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17365036	17367099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17365044_17365535
ES.14392.72	chr17	+	6586	3	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	24019	5608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCATGTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	17365695	17372701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17366130_17366465_17366734_17366817
ES.14392.73	chr17	+	400	2	NNC	ENSMUSG00000095990.2	novel	2684	4	NA	NA	24514	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCACCTTCTAAGGGA	NA	False	NA	NA	False	NA	NA	NA	17366190	17367092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17366368_17366869
ES.14392.74	chr17	+	3402	2	Intergenic	novelGene_12057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	200	False	NA	NA	False	NA	NA	NA	17374819	17379673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17376841_17378292
ES.14392.75	chr17	+	2307	5	Intergenic	novelGene_12058	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	93.4170755269078	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAAGTATGCTGCTCT	NA	False	NA	22	True	NA	NA	NA	17399229	17426651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399262_17422956_17423084_17423325_17423387_17423783_17423899_17424679
ES.14392.76	chr17	+	2172	4	Intergenic	novelGene_12059	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_1	84.1044324370336	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGATATCCCCAAGTAT	NA	False	NA	14	True	NA	NA	NA	17399241	17426643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399262_17422956_17423084_17423325_17423387_17424679
ES.14392.77	chr17	+	2356	4	Intergenic	novelGene_12060	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTATGCTGCTCTTTTTTC	NA	False	NA	28	True	NA	NA	NA	17399523	17426657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
ES.14392.78	chr17	+	5343	4	Intergenic	novelGene_12061	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	89.8455464796237	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCAAGGTCACTTTGA	NA	False	NA	NA	False	TATAAA	-15	NA	17399541	17429712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399664_17422956_17423084_17423325_17423387_17424679
ES.14392.79	chr17	+	2317	5	Intergenic	novelGene_12062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	71.2355248454028	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCAACATAGTTTA	NA	False	NA	18	True	NA	NA	NA	17399549	17426491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17399977_17400131_17422956_17423084_17423325_17423387_17424679
ES.14392.8	chr17	+	1997	1	FSM	ENSMUSG00000060149.8	ENSMUST00000071374.6	861	1	-748	-388	-748	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCAAGTGGCCTACTCG	NA	False	NA	25	True	NA	NA	NA	17192423	17194420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17192400_17194400
ES.14392.80	chr17	+	2187	4	Intergenic	novelGene_12064	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTGGGTGGGTGTGT	NA	False	NA	42	True	NA	NA	NA	17399550	17426515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
ES.14392.81	chr17	+	2387	5	Intergenic	novelGene_12063	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	88.0124280996724	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399550	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17402729_17402961_17422956_17423084_17423325_17423387_17424679
ES.14392.82	chr17	+	2267	5	Intergenic	novelGene_12065	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	91.6088833028763	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399552	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399664_17419502_17419653_17422943_17423084_17423325_17423387_17424679
ES.14392.83	chr17	+	4711	4	Intergenic	novelGene_12066	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAATTTGTGAAATTCC	NA	False	NA	NA	False	NA	NA	NA	17399552	17429041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
ES.14392.84	chr17	+	2102	4	Intergenic	novelGene_12067	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	89.8455464796237	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399554	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399664_17422956_17423084_17423325_17423387_17424679
ES.14392.85	chr17	+	2267	5	Intergenic	novelGene_12068	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	91.6088833028763	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399588	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399664_17399977_17400177_17422956_17423084_17423325_17423387_17424679
ES.14392.86	chr17	+	2389	5	Intergenic	novelGene_12069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	78.091292728447	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTGATATCCCCAAGT	NA	False	NA	12	True	NA	NA	NA	17399613	17426641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17399977_17400117_17422956_17423084_17423325_17423387_17424679
ES.14392.87	chr17	+	2232	4	Intergenic	novelGene_12070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	89.8455464796237	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17399632	17426649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17422963_17423084_17423325_17423387_17424679
ES.14392.89	chr17	+	2468	5	Intergenic	novelGene_12072	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	88.0124280996724	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17399634	17426649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17402729_17402961_17422956_17423084_17423325_17423387_17424679
ES.14392.9	chr17	+	4661	1	Intergenic	novelGene_12039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGTGTCTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	17194730	17199391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17194700_17199400
ES.14392.90	chr17	+	2211	5	Intergenic	novelGene_12071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	78.091292728447	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399634	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17399714_17399977_17400117_17422956_17423084_17423325_17423387_17424679
ES.14392.91	chr17	+	2464	4	Intergenic	novelGene_12073	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	89.8455464796237	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	17	True	NA	NA	NA	17399711	17426490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17400177_17422956_17423084_17423325_17423387_17424679
ES.14392.92	chr17	+	2379	4	Intergenic	novelGene_12074	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	74.593714361347	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399744	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17400131_17422956_17423084_17423325_17423387_17424679
ES.14392.93	chr17	+	2185	4	Intergenic	novelGene_12075	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	84.9169528945127	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	11	True	NA	NA	NA	17399924	17426484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17400117_17422956_17423084_17423325_17423387_17424679
ES.14392.94	chr17	+	2344	4	Intergenic	novelGene_12076	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	74.593714361347	237	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17399944	17426649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17400131_17422956_17423084_17423325_17423387_17424679
ES.14392.95	chr17	+	4547	1	Intergenic	novelGene_12077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAGTTAAATCC	NA	False	NA	NA	False	NA	NA	NA	17414655	17419202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17414700_17419200
ES.14392.96	chr17	+	4695	1	Intergenic	novelGene_12078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAACAACAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	17416179	17420874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17416200_17420900
ES.14392.97	chr17	+	2221	4	Intergenic	novelGene_12079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	89.8455464796237	234	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATATCCCCAAGTATG	NA	False	NA	15	True	NA	NA	NA	17416559	17426644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17416628_17422956_17423084_17423325_17423387_17424679
ES.14392.98	chr17	+	4654	3	Intergenic	novelGene_12081	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_2	52.5	232	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGATATCCCCAAGTA	NA	False	NA	13	True	NA	NA	NA	17420453	17426642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17423084_17423325_17423387_17424679
ES.14393.1	chr17	+	345	2	NNC	ENSMUSG00000116802.2	novel	2194	4	NA	NA	-41	-10261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTAAATGATTAAAAT	6183	False	NA	NA	False	NA	NA	NA	17455092	17474871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17455288_17474721
ES.14393.2	chr17	+	2480	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	-8	-278	-8	278	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAAGTATGCTGCTCT	6216	False	NA	16	True	NA	NA	NA	17455125	17486603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ES.14393.3	chr17	+	3654	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	10	-1470	10	1470	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGCTGATCTGTGGAGG	6234	False	NA	NA	False	ACTAAA	-38	NA	17455143	17487795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ES.14393.4	chr17	+	2674	5	NNC	ENSMUSG00000116802.2	novel	2194	4	NA	NA	27	276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.8766566000547	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	6251	False	NA	14	True	NA	NA	NA	17455160	17486601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17455288_17458286_17458518_17482739_17482867_17483108_17483170_17484473
ES.14393.5	chr17	+	2366	4	NNC	ENSMUSG00000116802.2	novel	2194	4	NA	NA	52	274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.5327176743499	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATCCCCAAGTATGCTG	6276	False	NA	12	True	NA	NA	NA	17455185	17486599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17455238_17482739_17482867_17483108_17483170_17484473
ES.14393.6	chr17	+	2234	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	73	-113	73	113	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTAAGGGATGCAACATA	6297	False	NA	NA	False	NA	NA	NA	17455206	17486438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ES.14393.7	chr17	+	5433	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	73	-3312	73	3312	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAAGGTCACTTTGAGT	6297	False	NA	NA	False	TATAAA	-17	NA	17455206	17489637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ES.14393.8	chr17	+	2464	5	NNC	ENSMUSG00000116802.2	novel	2194	4	NA	NA	75	114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.8766566000547	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGGGATGCAACATAG	6299	False	NA	NA	False	NA	NA	NA	17455208	17486439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17455288_17458286_17458518_17482739_17482867_17483108_17483170_17484473
ES.14393.9	chr17	+	4230	1	Intergenic	novelGene_12084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATGAATCCTCTATG	NA	False	NA	NA	False	NA	NA	NA	17476488	17480718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17476500_17480700
ES.14394.1	chr17	-	174	1	Intergenic	novelGene_12037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTAATTTCATA	NA	False	NA	NA	False	NA	NA	NA	17184884	17184710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17184700_17184900
ES.14395.1	chr17	-	1421	2	Antisense	novelGene_ENSMUSG00000116802.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGTTATCAAGA	NA	False	NA	NA	False	NA	NA	NA	17457863	17285827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_17286193_17456807
ES.14395.2	chr17	-	2098	1	Intergenic	novelGene_12051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGTTATCAA	NA	False	NA	NA	False	NA	NA	NA	17287927	17285829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17285800_17287900
ES.14395.3	chr17	-	7381	1	Intergenic	novelGene_12052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGTAGAATTTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	17295938	17288557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17288600_17295900
ES.14395.4	chr17	-	178	1	Intergenic	novelGene_12053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGAGCTGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	17292551	17292373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17292400_17292600
ES.14395.5	chr17	-	7368	1	Intergenic	novelGene_12054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17353106	17345738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17345700_17353100
ES.14395.6	chr17	-	154	1	Intergenic	novelGene_12055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	17348741	17348587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17348600_17348700
ES.14395.7	chr17	-	157	1	Intergenic	novelGene_12080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	17419630	17419473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17419500_17419600
ES.14396.1	chr17	-	1631	1	Intergenic	novelGene_12082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17466694	17465063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17465100_17466700
ES.14397.1	chr17	-	2451	1	Intergenic	novelGene_12083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATACAAGGACGGAAATCA	NA	False	NA	NA	False	NA	NA	NA	17471825	17469374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17469400_17471800
ES.14398.1	chr17	+	172	1	Intergenic	novelGene_12085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATACTGAAT	NA	False	NA	NA	False	NA	NA	NA	17491022	17491194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17491000_17491200
ES.14399.1	chr17	-	176	1	Intergenic	novelGene_12086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAGAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	17493425	17493249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17493200_17493400
ES.144.1	chr1	+	2427	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	-1011	2171	-1011	-984	multi-exon	FALSE	canonical	2	4	junction_1	4.02988833592198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTGCTTGAAAACTG	NA	False	NA	NA	False	AATAAA	-15	NA	16174986	16201787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ES.144.2	chr1	+	3408	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	-1006	1185	-1006	2	multi-exon	FALSE	canonical	2	4	junction_1	4.02988833592198	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGGTTATTAGCTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	16174991	16202773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ES.144.3	chr1	+	3458	5	NNC	ENSMUSG00000025921.8	novel	3587	6	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.18465843842649	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTGTCTTTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	16175893	16203958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_16176531_16198385_16198488_16199419_16199566_16201298_16201431_16201517
ES.144.4	chr1	+	3521	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAAAAAAAAAACAGTA	NA	False	NA	NA	False	NA	NA	NA	16182219	16185740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16182200_16185700
ES.144.5	chr1	+	3786	4	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	20236	1187	-4492	0	3prime_fragment	FALSE	canonical	3	13	junction_1	1.4142135623731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGGTTATTAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	16196233	16202771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_16198488_16199419_16199566_16201298_16201431_16201517
ES.1440.1	chr1	+	172	1	Antisense	novelGene_ENSMUSG00000009418.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	135381301	135381473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_135381300_135381500
ES.14400.1	chr17	+	2449	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-398	-1525	-398	118	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17514306	17539891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
ES.14400.10	chr17	+	4631	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-39	-933	intron_retention	FALSE	canonical	0	0	junction_2	177.527114952082	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594531	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597007_17597101_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.11	chr17	+	2419	11	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-39	-933	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	168.48445032109	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594531	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597007_17597101_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.12	chr17	+	2063	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	-7	1164	-7	-1164	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCCAAGGTCTGATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	17594563	17613997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.13	chr17	+	4481	6	NIC	ENSMUSG00000116564.2	novel	1596	8	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	398	junction_4	30.6241734582339	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAAATTTGTCTTTTG	NA	False	NA	NA	False	AATGAA	-18	NA	17594783	17608014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594933_17597980_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ES.14400.14	chr17	+	3853	7	NIC	ENSMUSG00000116564.2	novel	1596	8	NA	NA	-38	7	intron_retention	FALSE	canonical	3	398	junction_5	31.9309150093343	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTTTGAATTAATCT	NA	False	NA	NA	False	AATGAA	-27	NA	17594795	17608023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594933_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ES.14400.15	chr17	+	1617	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	-25	4	-25	-4	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAACAAATTTGTCTTT	NA	False	NA	NA	False	AATGAA	-16	NA	17594808	17608012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ES.14400.16	chr17	+	4010	9	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-7	-1166	intron_retention	FALSE	canonical	3	388	junction_8	30.9553610058096	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTCCAAGGTCTGATT	NA	False	NA	NA	False	AATAAA	-15	NA	17594826	17613995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594933_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.17	chr17	+	4867	8	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-6	-933	intron_retention	FALSE	canonical	3	388	junction_7	28.7345344383332	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594827	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594933_17597980_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.18	chr17	+	4240	9	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-4	-933	intron_retention	FALSE	canonical	3	388	junction_8	30.9553610058096	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594829	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594933_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.19	chr17	+	2171	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	1	-953	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	135.603270290876	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAATAGAACAACTT	NA	False	NA	-14	True	NA	NA	NA	17594834	17614208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597980_17598120_17598744_17598862_17600905_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.2	chr17	+	2422	12	Fusion	ENSMUSG00000116564.2_ENSMUSG00000072761.11	novel	526	4	NA	NA	-44	-928	multi-exon	FALSE	canonical	0	0	junction_1	186.958120559058	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTAGTTCTCTCTTTT	NA	False	NA	11	True	AATAAA	-20	NA	17514660	17614233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17514852_17590167_17590297_17593719_17593892_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.20	chr17	+	2219	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	1	-624	1	624	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATGATTCCAACTGAT	NA	False	NA	NA	False	AAGAAA	-19	NA	17594834	17608640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ES.14400.22	chr17	+	5410	9	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	267	933	4	-933	intron_retention	FALSE	canonical	3	346	junction_3	39.1549406205654	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594837	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229
ES.14400.23	chr17	+	1801	11	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	5	52618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	129.856420711492	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGAGAGATGGCTGAG	NA	False	NA	NA	False	NA	NA	NA	17594838	17667779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716_17613992_17667760
ES.14400.24	chr17	+	1932	9	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	9	-933	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	180.160648797122	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594842	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17607325_17607836_17610229_17610327_17613706
ES.14400.25	chr17	+	2007	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	-3	-933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	131.626388588457	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594848	17614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605934_17607325_17607836_17610229_17610327_17613716
ES.14400.26	chr17	+	9797	1	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	0	-1276	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	17594851	17604648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17594900_17604600
ES.14400.27	chr17	+	4077	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	1	-1166	intron_retention	FALSE	canonical	0	0	junction_2	177.527114952082	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTCCAAGGTCTGATT	NA	False	NA	NA	False	AATAAA	-15	NA	17594852	17613995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597007_17597101_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.28	chr17	+	2936	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	283	1	2	-1	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTTGGCTTTACTTC	NA	False	NA	9	True	AATAAA	-14	NA	17594853	17615160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.29	chr17	+	5490	10	NNC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	3	-929	intron_retention	FALSE	canonical	0	0	junction_2	176.493066348613	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTGTAGTTCTCTCTTT	NA	False	NA	10	True	AATAAA	-19	NA	17594854	17614232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17594933_17597007_17597101_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229
ES.14400.3	chr17	+	1971	3	NIC	ENSMUSG00000072761.11	novel	526	4	NA	NA	-41	124	intron_retention	FALSE	canonical	1	4	junction_1	38	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17514663	17539897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17514852_17536705_17536767_17538175
ES.14400.30	chr17	+	5698	6	NIC	ENSMUSG00000116564.2	novel	1596	8	NA	NA	1147	7	intron_retention	FALSE	canonical	3	398	junction_4	34.9708449997995	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTTTGAATTAATCT	NA	False	NA	NA	False	AATGAA	-27	NA	17595998	17608023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ES.14400.31	chr17	+	176	1	Intergenic	novelGene_12089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACACACAATT	NA	False	NA	NA	False	NA	NA	NA	17603321	17603497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17603300_17603500
ES.14400.32	chr17	+	3269	1	Intergenic	novelGene_12090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATGAAATCATAAATTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	17616953	17620222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17617000_17620200
ES.14400.33	chr17	+	4713	1	Intergenic	novelGene_12091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGTGGTGGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	17617407	17622120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17617400_17622100
ES.14400.34	chr17	+	2489	4	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	41073	11	-5075	-11	3prime_fragment	FALSE	canonical	0	0	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTGAATTTGGCTGT	NA	False	NA	1	True	AATAAA	-15	NA	17664006	17679638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_17664051_17666229_17666326_17674521_17674600_17677367
ES.14400.4	chr17	+	5261	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	-29	-4706	-29	3299	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTCACTTTGAGTTATT	NA	False	NA	NA	False	TATAAA	-27	NA	17514675	17543072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
ES.14400.5	chr17	+	2469	12	Fusion	ENSMUSG00000116564.2_ENSMUSG00000072761.11	novel	526	4	NA	NA	-17	-928	multi-exon	FALSE	canonical	0	0	junction_1	186.519845841031	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTAGTTCTCTCTTTT	NA	False	NA	11	True	AATAAA	-20	NA	17514687	17614233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17514852_17590167_17590371_17593719_17593892_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.6	chr17	+	1308	5	NNC	ENSMUSG00000072761.11	novel	526	4	NA	NA	-5	118	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	29.364093720052	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	NA	False	NA	NA	NA	17514699	17539891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175_17538946_17539693
ES.14400.7	chr17	+	3415	12	Fusion	ENSMUSG00000116564.2_ENSMUSG00000072761.11	novel	3220	10	NA	NA	4	-928	multi-exon	FALSE	canonical	0	0	junction_1	163.999697641326	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTAGTTCTCTCTTTT	NA	False	NA	11	True	AATAAA	-20	NA	17514708	17614233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_17514852_17590167_17590297_17593719_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ES.14400.8	chr17	+	966	1	Intergenic	novelGene_12088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	17559526	17560492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17559500_17560500
ES.14400.9	chr17	+	2999	3	Antisense	novelGene_ENSMUSG00000043801.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	17562579	17567025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_17563891_17564233_17565384_17566487
ES.14401.1	chr17	-	172	1	Intergenic	novelGene_12087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATTCTGGTAAT	708	False	NA	NA	False	NA	NA	NA	17550015	17549843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17549800_17550000
ES.14402.1	chr17	-	1084	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-77	-322	-77	322	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGTACTAAACCTC	NA	False	NA	NA	False	NA	NA	NA	17566479	17565395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17565400_17566500
ES.14402.2	chr17	-	888	2	Genic_Genomic	ENSMUSG00000043801.8	novel	685	1	NA	NA	-73	276	multi-exon	FALSE	non_canonical	0	0	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	17566475	17565441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_17566111_17566256
ES.14402.3	chr17	-	931	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-73	-173	-73	173	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTTTAAGATGGTCA	NA	False	NA	NA	False	AATAAA	-21	NA	17566475	17565544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17565500_17566500
ES.14403.1	chr17	-	213	1	Intergenic	novelGene_12092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGGTAAAGCTGTTT	NA	False	NA	NA	False	TATAAA	-10	NA	17645034	17644821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17644800_17645000
ES.14404.1	chr17	+	1613	5	Intergenic	novelGene_12093	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	6.83282518435822	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGTTTAGTCTGTGA	NA	False	NA	6	True	NA	NA	NA	17711632	17733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17711842_17713668_17713761_17730736_17730905_17731412_17731489_17732495
ES.14404.10	chr17	+	2450	4	Intergenic	novelGene_12103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	12.0277457017791	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTGCATATATGCG	NA	False	NA	NA	False	NA	NA	NA	17724942	17734524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725212_17730730_17730807_17731412_17731489_17732495
ES.14404.11	chr17	+	2177	2	Intergenic	novelGene_12104	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGGAGGGATCATAGAC	NA	False	NA	NA	False	NA	NA	NA	17724943	17727495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725745_17726119
ES.14404.12	chr17	+	1552	5	Intergenic	novelGene_12105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_2	9.31396800509858	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTAGTCTGTGAA	NA	False	NA	7	True	NA	NA	NA	17724946	17733564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725212_17727154_17727221_17730730_17730807_17731412_17731489_17732495
ES.14404.13	chr17	+	4125	4	Intergenic	novelGene_12106	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	13.6707311029399	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTTAGTCTGTGAAA	NA	False	NA	8	True	NA	NA	NA	17724947	17733565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725596_17725971_17727221_17730731_17730807_17731412
ES.14404.14	chr17	+	3760	1	Intergenic	novelGene_12107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAATAAGCAACCTCATG	NA	False	NA	NA	False	ATTAAA	-15	NA	17731986	17735746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17732000_17735700
ES.14404.2	chr17	+	3389	8	Intergenic	novelGene_12094	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	10.7133332910015	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATATGTGCATATA	NA	False	NA	NA	False	NA	NA	NA	17711651	17734520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17711842_17713668_17713761_17714476_17714540_17727158_17727221_17727548_17728354_17730730_17730807_17731412_17731489_17732495
ES.14404.3	chr17	+	2867	7	Intergenic	novelGene_12095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	10.761298971572	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGTTTAGTCTGTGA	NA	False	NA	6	True	NA	NA	NA	17711652	17733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17711948_17713668_17713761_17725144_17725212_17727154_17728354_17730736_17730807_17731412_17731489_17732495
ES.14404.4	chr17	+	1461	5	Intergenic	novelGene_12096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	10.688779163216	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGTTTAGTCTGTGA	NA	False	NA	6	True	NA	NA	NA	17711785	17733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17711948_17713668_17713761_17730736_17730807_17731412_17731482_17732495
ES.14404.5	chr17	+	1333	5	Intergenic	novelGene_12097	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	11.6404467268228	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGCATTGTTTAATAG	NA	False	NA	NA	False	NA	NA	NA	17711788	17733425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17711948_17713668_17713761_17730730_17730807_17731412_17731489_17732495
ES.14404.6	chr17	+	4859	4	Intergenic	novelGene_12101	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	13.6707311029399	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATATGTGCATATA	NA	False	NA	NA	False	NA	NA	NA	17724928	17734520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725992_17726602_17727221_17730736_17730807_17731412
ES.14404.7	chr17	+	2932	5	Intergenic	novelGene_12100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.25999201277446	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTTAGTCTGTGAAAT	NA	False	NA	9	True	NA	NA	NA	17724928	17733566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725212_17727154_17727221_17728092_17728354_17730736_17730905_17731412
ES.14404.8	chr17	+	1493	4	Intergenic	novelGene_12099	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.6707311029399	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGTTTAGTCTGTGA	NA	False	NA	6	True	NA	NA	NA	17724928	17733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725212_17730736_17730807_17731412_17731485_17732495
ES.14404.9	chr17	+	2156	2	Intergenic	novelGene_12102	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17724941	17727473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17725596_17725971
ES.14405.1	chr17	-	215	1	Intergenic	novelGene_12098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACATCCATAAAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	17715568	17715353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17715400_17715600
ES.14406.1	chr17	-	174	1	Intergenic	novelGene_12108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	17734074	17733900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17733900_17734100
ES.14407.1	chr17	+	6469	2	Antisense	novelGene_ENSMUSG00000023845.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACTGCCATTTCTTGGC	NA	False	NA	NA	False	NA	NA	NA	17757477	17766199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_17761689_17763941
ES.14407.2	chr17	+	2593	2	Antisense	novelGene_ENSMUSG00000023845.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17757477	17766176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_17758966_17765071
ES.14408.1	chr17	+	3950	2	Antisense	novelGene_ENSMUSG00000116796.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCCGGGAGTCGATCG	NA	False	NA	NA	False	NA	NA	NA	17796351	17845322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_17799635_17844655
ES.14409.1	chr17	-	12065	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	-13	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATGGATTCATCTGA	9880	False	NA	NA	False	AATAAA	-17	NA	17845322	17741671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.10	chr17	-	4744	18	NNC	ENSMUSG00000023845.8	novel	12052	18	NA	NA	13151	-1127	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	8.26381615474633	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGAAAATAGCCTGCTT	6605	False	NA	NA	False	AATAAA	-16	NA	17831600	17748453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17831472
ES.14409.12	chr17	-	3346	17	ISM	ENSMUSG00000023845.8	ENSMUST00000231515.2	2720	18	21	1698	21	-1698	5prime_fragment	FALSE	canonical	3	25	junction_8	4.89259644769523	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCACCATAATACCTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	17798935	17749024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793
ES.14409.13	chr17	-	5210	1	Intergenic	novelGene_12109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAAAATGTTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	17757018	17751808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17751800_17757000
ES.14409.14	chr17	-	4232	14	NNC	ENSMUSG00000023845.8	novel	2708	12	NA	NA	1	10760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.82148351632983	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAGACAATCTGAATC	NA	False	NA	NA	False	AAAAAG	-4	NA	17844750	17761619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17763400_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.15	chr17	-	2646	8	ISM	ENSMUSG00000023845.8	ENSMUST00000232462.2	2864	11	-957	14606	-396	1656	5prime_fragment	FALSE	canonical	3	25	junction_2	3.68117106477861	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATAGAAGAAATGTTT	9494	False	NA	NA	False	NA	NA	NA	17845708	17786985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.16	chr17	-	4214	6	ISM	ENSMUSG00000023845.8	ENSMUST00000232462.2	2864	11	-565	16591	-4	-329	5prime_fragment	FALSE	canonical	3	26	junction_5	3.74165738677394	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACATATTTTAATAAG	9886	False	NA	NA	False	TATAAA	-29	NA	17845316	17788970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.17	chr17	-	2681	7	NNC	ENSMUSG00000023845.8	novel	2708	12	NA	NA	15156	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.8959353143362	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTTTGTTTTATTA	8610	False	NA	NA	False	AATAAA	-18	NA	17829595	17790020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17827437_17827543_17829522
ES.14409.18	chr17	-	2711	6	ISM	ENSMUSG00000023845.8	ENSMUST00000232462.2	2864	11	-115	17644	37	0	5prime_fragment	FALSE	canonical	3	26	junction_5	3.74165738677394	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATTGTTTGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	17844866	17790023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.19	chr17	-	1497	2	ISM	ENSMUSG00000023845.8	ENSMUST00000231666.2	2472	6	-4	8775	-4	-8775	5prime_fragment	FALSE	canonical	3	26	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTATGTAAAACTGAA	9886	False	NA	NA	False	GATAAA	-10	NA	17845316	17798798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17799635_17844655
ES.14409.2	chr17	-	11529	18	NNC	ENSMUSG00000023845.8	novel	12052	18	NA	NA	13148	0	intron_retention	FALSE	canonical	1	3	junction_17	8.26381615474633	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATGGATTCATCTGA	6602	False	NA	NA	False	AATAAA	-17	NA	17831603	17741671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17831472
ES.14409.20	chr17	-	7570	2	Intergenic	novelGene_12110	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCTCCTATATACAAAC	NA	False	NA	NA	False	NA	NA	NA	17844318	17834205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_17838490_17841032
ES.14409.3	chr17	-	3288	1	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	98215	2135	48727	-2135	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAAGTTGTCATGTTT	NA	False	NA	NA	False	NA	NA	NA	17747094	17743806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17743800_17747100
ES.14409.4	chr17	-	2702	1	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	97720	3216	48232	2439	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACTTCATTTGTAC	NA	False	NA	NA	False	TATAAA	-15	NA	17747589	17744887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_17744900_17747600
ES.14409.5	chr17	-	5795	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	600	5657	42	-2	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCCAGAGGCTCATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	17844709	17747328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.6	chr17	-	5701	19	NNC	ENSMUSG00000023845.8	novel	12052	18	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.64741451404856	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCCAGAGGCTCATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	17844793	17747328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17748719_17748896_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.7	chr17	-	5171	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	572	6309	14	-654	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTGAATATTTGTGG	NA	False	NA	NA	False	NA	NA	NA	17844737	17747980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.8	chr17	-	5300	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	-20	6772	-17	-1117	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTGCTTTAATCCTAGA	9873	False	NA	NA	False	AATAAA	-26	NA	17845329	17748443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ES.14409.9	chr17	-	4922	19	NNC	ENSMUSG00000023845.8	novel	12052	18	NA	NA	13151	-1121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	10.9927024053615	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCTGCTTTAATCC	6605	False	NA	NA	False	AATAAA	-22	NA	17831600	17748447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17829522_17829695_17831472
ES.1441.1	chr1	+	157	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135397106	135397263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135397100_135397300
ES.14410.1	chr17	+	180	1	Intergenic	novelGene_12111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGTGGAAAAAGAA	8136	False	NA	NA	False	NA	NA	NA	17958098	17958278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_17958100_17958300
ES.14411.1	chr17	-	3256	1	Intergenic	novelGene_12112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGGGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-1	NA	18046965	18043709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_18043700_18047000
ES.14412.1	chr17	+	2609	3	NIC	ENSMUSG00000080316.12	novel	1147	10	NA	NA	-19	0	intron_retention	FALSE	canonical	1	1	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTTGTTTGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	18047400	18059333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_18047590_18056346_18056416_18056982
ES.14412.2	chr17	+	4546	1	FSM	ENSMUSG00000080316.12	ENSMUST00000178056.2	4074	1	1574	-2046	-1423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTTGTTTGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	18054787	18059333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_18054800_18059300
ES.14412.3	chr17	+	2857	2	ISM	ENSMUSG00000080316.12	ENSMUST00000155293.8	648	5	-301	-549	-301	0	intron_retention	FALSE	canonical	3	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTTGTTTGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	18055909	18059333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_18056416_18056982
ES.14412.4	chr17	+	1016	3	ISM	ENSMUSG00000080316.12	ENSMUST00000012759.14	762	8	6482	-557	-32	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTCGTGGGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	18057923	18059328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_18058032_18058348_18058506_18058577
ES.14412.5	chr17	+	3434	2	ISM	ENSMUSG00000080316.12	ENSMUST00000139969.8	1146	10	7261	-1	44	1	intron_retention	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGATGTATGAGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	18058586	18063272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_18058789_18060040
ES.14413.1	chr17	-	355	1	FSM	ENSMUSG00000090957.3	ENSMUST00000164167.3	1777	1	1587	-165	1587	165	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCGATAGCGGGTG	NA	False	NA	NA	False	NA	NA	NA	18131491	18131136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_18131100_18131500
ES.14414.1	chr17	+	177	1	Intergenic	novelGene_12113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	19235515	19235692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_19235500_19235700
ES.14415.1	chr17	-	3448	1	Antisense	novelGene_ENSMUSG00000116984.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGCCTCTTCTCATCA	NA	False	NA	NA	False	AAAAAG	-18	NA	19705016	19701568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_19701600_19705000
ES.14415.2	chr17	-	5590	1	Antisense	novelGene_ENSMUSG00000116984.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGGTTTGTCTTAGC	NA	False	NA	NA	False	NA	NA	NA	19707354	19701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_19701800_19707400
ES.14416.1	chr17	+	220	1	Intergenic	novelGene_12114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTTGAT	NA	False	NA	NA	False	AAAAAG	-13	NA	20319928	20320148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_20319900_20320100
ES.14417.1	chr17	-	231	1	Intergenic	novelGene_12115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	20604047	20603816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_20603800_20604000
ES.14418.1	chr17	-	2772	1	Intergenic	novelGene_12116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTAAGTATACTGATGG	NA	False	NA	NA	False	NA	NA	NA	20664914	20662142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_20662100_20664900
ES.14419.1	chr17	+	2461	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	-51	0	-51	0	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGTAATCGGAATGG	NA	False	NA	39	True	AATAAA	-24	NA	21165521	21186178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.10	chr17	+	1478	7	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-50	-269	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	473.940807368271	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTCCTGTAACCCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	21165698	21178777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178175
ES.14419.13	chr17	+	2144	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	342.845952198324	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21165707	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21181887_21182835_21182979_21185500_21185593_21185716
ES.14419.16	chr17	+	3327	14	NIC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-32	0	intron_retention	FALSE	canonical	3	1213	junction_1	80.2689266884513	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTCTCTAGTCTTAGT	NA	False	NA	28	True	AATAAA	-13	NA	21165716	21186167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21165846_21171604_21171696_21174876_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.22	chr17	+	5000	11	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-23	-5	intron_retention	FALSE	canonical	1	3	junction_6	391.134005169584	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21165725	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21176283_21176966_21177115_21177218_21177375_21178981_21179066_21179201_21179273_21179650_21179786_21180727_21182979_21185500_21185593_21185716
ES.14419.26	chr17	+	2323	14	NNC	ENSMUSG00000007564.16	novel	750	5	NA	NA	388	-5	intron_retention	FALSE	canonical	1	3	junction_1	358.468966578698	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21166136	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21166235_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.27	chr17	+	2127	14	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	6030	12	-5236	-1	3prime_fragment	FALSE	canonical	3	1238	junction_9	75.5375215357462	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTCTCTAGTCTTAG	NA	False	NA	27	True	AATAAA	-12	NA	21171602	21186166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.28	chr17	+	2182	16	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-5197	39153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	452.48569774819	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAATATCACAAAGGACT	NA	False	NA	NA	False	NA	NA	NA	21171641	21225331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716_21186167_21191690_21191745_21225291
ES.14419.29	chr17	+	2395	13	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	8939	16	-2327	-5	3prime_fragment	FALSE	canonical	3	1238	junction_8	77.7918786820892	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21174511	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.3	chr17	+	2332	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	345.685690966195	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21165627	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176056_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.31	chr17	+	1394	9	ISM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	13407	16	-23	-5	3prime_fragment	FALSE	canonical	3	1238	junction_4	86.9162671770941	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21178979	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.32	chr17	+	3770	1	Antisense	novelGene_ENSMUSG00000093429.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	21187956	21191726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_21188000_21191700
ES.14419.4	chr17	+	2292	15	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-72	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	346.318686549053	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTAGTCTTAGTAAT	NA	False	NA	31	True	AATAAA	-16	NA	21165676	21186170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178987_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.14419.5	chr17	+	2323	16	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-71	39153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	334.63987940604	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAATATCACAAAGGACT	NA	False	NA	NA	False	NA	NA	NA	21165677	21225331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716_21186163_21225297
ES.14419.7	chr17	+	2306	15	NIC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-52	-5	combination_of_known_junctions	FALSE	canonical	2	39	junction_14	332.623806933261	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21165696	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185629_21185716
ES.14419.8	chr17	+	2340	16	NNC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-52	39153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	440.828744777632	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAATATCACAAAGGACT	NA	False	NA	NA	False	NA	NA	NA	21165696	21225331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185629_21185716_21186163_21225297
ES.14419.9	chr17	+	3720	13	NIC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	-52	-5	intron_retention	FALSE	canonical	3	1213	junction_1	82.2801363230114	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTTCTCTAGTC	NA	False	NA	23	True	AATAAA	-8	NA	21165696	21186162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21165846_21171604_21171696_21174876_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ES.1442.1	chr1	+	4018	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATAAGGCTAATTGTCA	NA	False	NA	NA	False	NA	NA	NA	135514206	135518224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135514200_135518200
ES.14420.1	chr17	+	2053	5	NIC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCACATAAGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	21229171	21263307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
ES.14420.10	chr17	+	3871	5	NNC	ENSMUSG00000067942.7	novel	1041	5	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.3559414282533	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTGTTTTTCTTT	NA	False	NA	6	True	AGTAAA	-17	NA	21229265	21249116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245703
ES.14420.11	chr17	+	3729	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	60	-2748	12	-123	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTCTTAAGAGTGACATC	NA	False	NA	NA	False	AATACA	-6	NA	21229272	21249000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14420.12	chr17	+	4496	5	NNC	ENSMUSG00000067942.7	novel	2090	5	NA	NA	169	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.847169643377	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGAATTTGTTTTTCT	NA	False	NA	4	True	AGTAAA	-15	NA	21229474	21249114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21230226_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14420.13	chr17	+	4433	1	NIC	ENSMUSG00000067942.7	novel	2090	5	NA	NA	11535	-979	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTACATAATTATGAAATCA	NA	False	NA	NA	False	ATTAAA	-17	NA	21240840	21245273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21240800_21245300
ES.14420.14	chr17	+	4738	1	NIC	ENSMUSG00000067942.7	novel	3800	5	NA	NA	15070	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGAATTTGTTTTTC	NA	False	NA	3	True	AGTAAA	-14	NA	21244375	21249113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21244400_21249100
ES.14420.2	chr17	+	3831	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	-31	0	7	0	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229171	21249123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14420.3	chr17	+	3910	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	2	-2871	2	0	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229214	21249123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14420.5	chr17	+	3961	6	NIC	ENSMUSG00000067942.7	novel	1041	5	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	23.6676995079792	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTTTTCTTTTGT	NA	False	NA	9	True	AGTAAA	-20	NA	21229220	21249119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21229371_21231937_21232035_21239090_21239152_21240333_21240461_21240967_21241097_21245722
ES.14420.6	chr17	+	4921	6	NNC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	7	46313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.1896528650172	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCATTTTTGAACTTCA	NA	False	NA	NA	False	NA	NA	NA	21229225	21309645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684_21265424_21308839
ES.14420.7	chr17	+	3122	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	23	655	7	-655	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGAGTCCAACCTGAT	NA	False	NA	NA	False	NA	NA	NA	21229225	21248468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14420.8	chr17	+	2100	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232663.2	552	5	-61	-1487	-16	-1	multi-exon	FALSE	canonical	2	12	junction_4	19.0394327646598	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCACATAAGTTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	21229244	21263305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21261684
ES.14420.9	chr17	+	2956	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	50	-1965	2	-906	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGGTGAGAAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	21229262	21248217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ES.14421.1	chr17	-	8013	2	Antisense	novelGene_ENSMUSG00000067942.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGAGTGCCTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	21245271	21236751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21240459_21240965
ES.14421.2	chr17	-	8519	1	Antisense	novelGene_ENSMUSG00000067942.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGGAGTGCCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	21245271	21236752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21236800_21245300
ES.14421.3	chr17	-	6781	3	Antisense	novelGene_ENSMUSG00000067942.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	21245271	21236801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21239151_21240332_21240459_21240965
ES.14421.4	chr17	-	5057	1	Antisense	novelGene_ENSMUSG00000067942.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTCCATGCTGTAACAT	NA	False	NA	NA	False	NA	NA	NA	21245271	21240214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21240200_21245300
ES.14422.1	chr17	-	124	1	FSM	ENSMUSG00002075486.1	ENSMUST00020183150.1	110	1	58	-72	58	72	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGATTCTCCCAG	NA	False	NA	NA	False	ATTAAA	-15	NA	21504416	21504292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_21504300_21504400
ES.14423.1	chr17	+	2926	4	FSM	ENSMUSG00000062743.10	ENSMUST00000162659.2	2917	4	-10	1	-10	-1	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGGTTTTGTTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	21603999	21619526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21604283_21612722_21612814_21613437_21613565_21617101
ES.14424.1	chr17	+	2085	5	NIC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	8.22724133595217	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643505	21655416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21643580_21647593_21647634_21647998_21648091_21650456_21650584_21653664
ES.14424.2	chr17	+	2045	4	FSM	ENSMUSG00000023882.16	ENSMUST00000167749.2	822	4	-14	-1209	11	0	multi-exon	FALSE	canonical	3	11	junction_1	10.1980390271856	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643505	21655416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21643580_21647998_21648091_21650456_21650584_21653664
ES.14424.4	chr17	+	2285	4	FSM	ENSMUSG00000023882.16	ENSMUST00000007884.15	2300	4	13	2	-12	-2	multi-exon	FALSE	canonical	2	3	junction_1	13.8884444373331	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACCGTTTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	21643507	21655414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21643824_21647998_21648091_21650456_21650584_21653664
ES.14424.5	chr17	+	2334	5	NNC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.2151240547029	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATGAAAACCGTTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	21643514	21655409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21643824_21647593_21647634_21647977_21648091_21650456_21650584_21653664
ES.14424.6	chr17	+	176	1	Intergenic	novelGene_12118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	21649276	21649452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21649300_21649500
ES.14425.1	chr17	-	183	1	Intergenic	novelGene_12117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATGTCAGAA	4413	False	NA	NA	False	NA	NA	NA	21646039	21645856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21645900_21646000
ES.14426.1	chr17	+	178	1	Intergenic	novelGene_12119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAAGTTTTTT	8854	False	NA	NA	False	NA	NA	NA	21659489	21659667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21659500_21659700
ES.14427.1	chr17	+	2566	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	49.3931928508373	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTCTCTCTCTCTGT	NA	False	NA	2	True	AATAAA	-18	NA	21670629	21685849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670670_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ES.14427.10	chr17	+	2673	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	2061	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.003731239387	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAAGCTTCTCTCTCTCT	NA	False	NA	0	True	AATAAA	-16	NA	21672696	21685847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21672790_21676558_21676651_21680128_21680276_21681922_21682050_21683633
ES.14427.2	chr17	+	2582	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	-4	-4	-4	4	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	6	True	AATAAA	-22	NA	21670631	21685853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ES.14427.3	chr17	+	2591	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53.081894276674	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAAGCTTCTCTCTCTCT	NA	False	NA	0	True	AATAAA	-16	NA	21670632	21685847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670684_21672698_21672790_21676542_21676651_21681922_21682050_21683633
ES.14427.4	chr17	+	2656	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.2999777975089	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTCTCTCTCTCTGTC	NA	False	NA	3	True	AATAAA	-19	NA	21670639	21685850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670684_21672613_21672790_21676558_21676651_21681922_21682050_21683633
ES.14427.5	chr17	+	2575	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.9220813826974	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	6	True	AATAAA	-22	NA	21670640	21685853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670670_21672698_21672790_21676542_21676651_21681922_21682050_21683633
ES.14427.6	chr17	+	7831	4	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	5	4	intron_retention	FALSE	canonical	3	17	junction_1	55.1603722491669	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	6	True	AATAAA	-22	NA	21670640	21685853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670670_21672698_21672790_21676558_21682050_21683633
ES.14427.7	chr17	+	4147	4	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	9	2	9	-2	intron_retention	FALSE	canonical	3	80	junction_1	23.1564725772779	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAAGCTTCTCTCTCTCT	NA	False	NA	0	True	AATAAA	-16	NA	21670644	21685847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922
ES.14427.8	chr17	+	1937	7	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.4620479103433	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTCTCTCTCTCTGT	NA	False	NA	2	True	AATAAA	-18	NA	21670646	21685849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670670_21672698_21672790_21676558_21676651_21680128_21680276_21681922_21682050_21683633_21684882_21685640
ES.14427.9	chr17	+	4612	5	NNC	ENSMUSG00000023892.9	novel	2574	5	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.7546814837731	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	False	NA	6	True	AATAAA	-22	NA	21670681	21685853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21670970_21672698_21672790_21676558_21676651_21680128_21682050_21683633
ES.14428.1	chr17	-	7245	1	Intergenic	novelGene_12120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGACTGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	21697527	21690282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21690300_21697500
ES.14429.1	chr17	+	878	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-75	-2200	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTAATCTTCATTGCCA	1400	False	NA	NA	False	AATAAA	-27	NA	21709184	21727826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
ES.14429.10	chr17	+	3067	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-2	0	-2	0	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAAAATGTTTTAATT	1473	False	NA	NA	False	ATTAAA	-13	NA	21709257	21730735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
ES.14429.11	chr17	+	1559	4	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	-2	-7220	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	74.0510334536633	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAGAAAAAAA	1473	False	NA	NA	False	NA	NA	NA	21709257	21722806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21721700
ES.14429.12	chr17	+	2130	5	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	1	834	multi-exon	FALSE	canonical	2	3	junction_3	76.3196403293412	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTGGCCATTTGGGG	1476	False	NA	NA	False	AATAAA	-20	NA	21709260	21752091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21748201_21748329_21750538
ES.14429.13	chr17	+	5267	4	ISM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	1	676	1	33	intron_retention	FALSE	canonical	3	156	junction_2	2.49443825784929	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATTATAACTGTGG	1476	False	NA	NA	False	AATAAA	-20	NA	21709260	21730059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242
ES.14429.14	chr17	+	5185	3	NIC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	3	45	intron_retention	FALSE	canonical	2	3	junction_2	79.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGGAAAAAGCTTTTT	1478	False	NA	NA	False	AATAAA	-32	NA	21709262	21730071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21709528_21711487_21711579_21725242
ES.14429.15	chr17	+	3807	4	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	33	-4974	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	74.5221816344339	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCCATTATAGAA	1508	False	NA	NA	False	NA	NA	NA	21709292	21725052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21721663
ES.14429.16	chr17	+	575	4	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	107	-8095	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	74.0510334536633	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTCTTGTTTGTTTCC	1582	False	NA	NA	False	NA	NA	NA	21709366	21721931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21721700
ES.14429.17	chr17	+	4436	1	Intergenic	novelGene_12121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTGTCTACATTCAA	NA	False	NA	NA	False	ATTAAA	-16	NA	21731013	21735449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21731000_21735400
ES.14429.18	chr17	+	5212	1	Intergenic	novelGene_12122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACGTTAGGCTGTTT	NA	False	NA	NA	False	AATATA	-23	NA	21731178	21736390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21731200_21736400
ES.14429.19	chr17	+	175	1	Intergenic	novelGene_12123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAACTACAA	NA	False	NA	NA	False	NA	NA	NA	21747041	21747216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21747000_21747200
ES.14429.2	chr17	+	2745	3	ISM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-41	7918	-41	-7209	5prime_fragment	FALSE	canonical	3	156	junction_2	3	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAGCATCTGTCCA	1434	False	NA	NA	False	NA	NA	NA	21709218	21722817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21709528_21711487_21711579_21720472
ES.14429.20	chr17	+	2884	5	NNC	ENSMUSG00000051341.7	novel	2175	3	NA	NA	-3230	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.10327780786685	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGGGAAAGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	21752570	21782479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21752970_21758834_21758933_21775246_21775338_21777396_21777524_21780310
ES.14429.21	chr17	+	3001	6	NNC	ENSMUSG00000051341.7	novel	2175	3	NA	NA	-3162	155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.88767014308903	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAAGCTTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	21752638	21782483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21752970_21754261_21754443_21758834_21758933_21775246_21775338_21777396_21777524_21780310
ES.14429.3	chr17	+	2236	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-28	827	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCCTTGGTGGCCA	1447	False	NA	NA	False	AATAAA	-13	NA	21709231	21752084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
ES.14429.4	chr17	+	3588	6	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-20	2187	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCTGAGTCTTTCAT	1455	False	NA	NA	False	AATAAA	-15	NA	21709239	21753444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
ES.14429.5	chr17	+	2126	5	Fusion	ENSMUSG00000117037.2_ENSMUSG00000057409.8	novel	3065	5	NA	NA	-10	827	multi-exon	FALSE	canonical	2	7	junction_2	66.404066140561	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCCTTGGTGGCCA	1465	False	NA	NA	False	AATAAA	-13	NA	21709249	21752084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21742853_21742938_21748201_21748329_21750538
ES.14429.6	chr17	+	2398	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-9	676	-9	33	multi-exon	FALSE	canonical	3	42	junction_4	50.8527285403645	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATTATAACTGTGG	1466	False	NA	NA	False	AATAAA	-20	NA	21709250	21730059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
ES.14429.7	chr17	+	3154	9	Fusion	ENSMUSG00000057409.8_ENSMUSG00000051341.7	novel	3065	5	NA	NA	-9	149	multi-exon	FALSE	canonical	1	2	junction_5	64.6563028636807	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGGGGAAAGCTTTTT	1466	False	NA	NA	False	AATAAA	-14	NA	21709250	21782477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21758834_21758933_21775246_21775338_21777396_21777524_21780310
ES.14429.8	chr17	+	4196	11	Fusion	ENSMUSG00000057409.8_ENSMUSG00000051341.7	novel	3065	5	NA	NA	-7	148	multi-exon	FALSE	canonical	0	0	junction_5	67.6654269180355	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGGGAAAGCTTTT	1468	False	NA	NA	False	AATAAA	-13	NA	21709252	21782476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248_21729167_21742853_21742938_21748201_21748329_21758834_21758933_21775246_21775338_21777396_21777524_21780310
ES.14429.9	chr17	+	3028	4	ISM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	-4	2920	-4	-2211	5prime_fragment	FALSE	canonical	3	156	junction_2	2.49443825784929	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTGTCTGAACAGTAAT	1471	False	NA	NA	False	AATAAA	-16	NA	21709255	21727815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242
ES.1443.1	chr1	+	178	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAAGTGATGTC	NA	False	NA	NA	False	NA	NA	NA	135580524	135580702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135580500_135580700
ES.14430.1	chr17	-	5090	1	Intergenic	novelGene_12124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCACAGGGGAAAAATTCC	NA	False	NA	NA	False	NA	NA	NA	21771580	21766490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21766500_21771600
ES.14431.1	chr17	+	2565	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	-13	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	39.6880194629171	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCATGGAAAGATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	21787256	21808959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966_21807314_21807411
ES.14431.10	chr17	+	3198	12	Fusion	ENSMUSG00000067931.7_ENSMUSG00000035868.10	novel	2652	6	NA	NA	24	578	multi-exon	FALSE	non_canonical	0	0	junction_5	41.5240645154626	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTGTGAGCACCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	21787293	21882034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21787508_21789277_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21831552_21831674_21848176_21848248_21849785_21849913_21871186_21871266_21875011_21875249_21876434_21876528_21880230
ES.14431.11	chr17	+	3150	12	Fusion	ENSMUSG00000067931.7_ENSMUSG00000035868.10	novel	2652	6	NA	NA	24	-750	intron_retention	FALSE	non_canonical	0	0	junction_5	44.9065144641879	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAAGTGTGACATTTG	NA	False	NA	NA	False	NA	NA	NA	21787293	21880706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21831552_21831674_21848176_21848248_21849785_21849913_21871186_21871266_21875011_21876528_21877828_21877956_21880230
ES.14431.12	chr17	+	5378	3	ISM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	12877	2	12877	-2	3prime_fragment	FALSE	canonical	3	100	junction_2	12.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCATGGAAAGATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	21800146	21808959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21803405_21805041_21805169_21806966
ES.14431.13	chr17	+	3614	1	FSM	ENSMUSG00000117013.2	ENSMUST00000232774.2	2354	1	-1088	-172	-1088	172	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGGGGAGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	21850617	21854231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21850600_21854200
ES.14431.14	chr17	+	4357	7	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-92	-59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.311805532172	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCCTAGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	21869452	21883823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21870722_21870819_21871186_21871266_21875121_21875249_21876434_21876528_21877828_21877956_21880230
ES.14431.15	chr17	+	650	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-21	-2318	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	11.9565881421081	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACATTAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	21869523	21879138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869614_21871186_21871282_21875121_21875249_21876434_21876528_21877828_21877956_21879020
ES.14431.16	chr17	+	2373	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-13	575	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	12.0933866224478	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACGTTTGTGAGCACCA	NA	False	NA	NA	False	AATAAA	-13	NA	21869531	21882031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21880230
ES.14431.17	chr17	+	4278	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.319217855735	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTACCAGGGACTGGG	NA	False	NA	NA	False	NA	NA	NA	21869531	21883874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869614_21871186_21871266_21875011_21875249_21876418_21876528_21877828_21877956_21880230
ES.14431.18	chr17	+	1459	4	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-12	-5370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2497987105808	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGGCTAATCATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	21869532	21876086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21870722_21870866_21871186_21871266_21875011
ES.14431.19	chr17	+	3924	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	-12	814	intron_retention	FALSE	canonical	3	13	junction_4	9.54921462739214	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCATGTCTTGCTCTTC	NA	False	NA	NA	False	TATAAA	-15	NA	21869532	21882270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21876528_21877828_21877956_21880230
ES.14431.2	chr17	+	2159	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	-13	-1100	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	48.6815045873573	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTACAAATGCAGTGAGT	NA	False	NA	NA	False	NA	NA	NA	21787256	21807861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806273_21807231_21807329
ES.14431.20	chr17	+	2731	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	0	819	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	8.84533775499839	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTGCTCTTCATTGG	NA	False	NA	NA	False	TATAAA	-20	NA	21869544	21882275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230
ES.14431.21	chr17	+	2347	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	1	-750	intron_retention	FALSE	canonical	3	13	junction_4	9.54921462739214	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCAAGTGTGACATTTG	NA	False	NA	NA	False	NA	NA	NA	21869545	21880706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21876528_21877828_21877956_21880230
ES.14431.22	chr17	+	1218	3	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	2	-5373	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	18	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTCATGGCTAATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	21869546	21876083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869614_21871186_21871266_21875011
ES.14431.23	chr17	+	3505	4	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	2	-2293	intron_retention	FALSE	canonical	3	8	junction_3	12.2836838484589	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTCTGTGCCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	21869546	21879163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21871266_21875011_21876528_21877828_21877956_21879020
ES.14431.24	chr17	+	3131	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	8	-2293	intron_retention	FALSE	canonical	3	8	junction_4	11.5974135047432	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTCTGTGCCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	21869552	21879163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21870819_21871186_21871266_21875011_21876528_21877828_21877956_21879020
ES.14431.25	chr17	+	2786	2	ISM	ENSMUSG00000117013.2	ENSMUST00000232793.2	771	5	34185	-690	17853	690	3prime_fragment	FALSE	canonical	3	38	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTAATCATTATACCT	NA	False	NA	NA	False	AATAAA	-21	NA	21869558	21876090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21871266_21875011
ES.14431.26	chr17	+	4424	7	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.0317101198995	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTACCAGGGACTGGG	NA	False	NA	NA	False	NA	NA	NA	21869558	21883874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21870722_21870815_21871186_21871266_21875011_21875249_21876418_21876528_21877828_21877956_21880230
ES.14431.27	chr17	+	4127	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	19896	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	14.0712472794703	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTAAGGGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	21869558	21903778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21880230_21883792_21903757
ES.14431.28	chr17	+	4254	7	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	19896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	12.1609575646365	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTAAGGGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	21869558	21903778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230_21883792_21903757
ES.14431.29	chr17	+	6714	5	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	14	1616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.2302494707577	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTTTGTGCATTTAG	NA	False	NA	NA	False	CATAAA	-18	NA	21869558	21885498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21879329
ES.14431.3	chr17	+	2658	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAAGATTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	21787267	21808965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
ES.14431.30	chr17	+	5936	6	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	18	1616	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	8.84533775499839	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTTTGTGCATTTAG	NA	False	NA	NA	False	CATAAA	-18	NA	21869562	21885498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230
ES.14431.31	chr17	+	2554	7	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	27	573	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.6678570821248	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCACGTTTGTGAGCAC	NA	False	NA	NA	False	AATAAA	-11	NA	21869571	21882029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21870722_21870819_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230
ES.14431.32	chr17	+	701	4	NNC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	84	-4609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.8977121983832	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTATTAGTGTTATAT	NA	False	NA	NA	False	AATAAA	-22	NA	21869628	21876847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21869695_21871186_21871282_21875121_21875249_21876434
ES.14431.33	chr17	+	4239	6	NIC	ENSMUSG00000035868.10	novel	4354	6	NA	NA	196	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	11.4087685575613	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGGGACTGGGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	21869740	21883880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21869794_21871186_21871266_21875011_21875249_21876434_21876528_21877828_21877956_21880230
ES.14431.34	chr17	+	5157	3	FSM	ENSMUSG00000117013.2_ENSMUSG00000035868.10	ENSMUST00000039726.8	1383	3	-3200	-574	-3200	574	multi-exon	FALSE	canonical	3	13	junction_2	6	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCACGTTTGTGAGCACC	NA	False	NA	NA	False	AATAAA	-12	NA	21873297	21882030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21876528_21877828_21877956_21880230
ES.14431.35	chr17	+	3014	5	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10221	562	multi-exon	FALSE	canonical	3	30	junction_1	5.44862367942584	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTGAGCACCATTTA	NA	False	NA	12	True	NA	NA	NA	21898866	21911583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899118_21900505_21900595_21904941_21905026_21906708_21906836_21909120
ES.14431.37	chr17	+	2561	5	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10190	218	multi-exon	FALSE	canonical	2	5	junction_1	14.790199457749	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGTCACAGAATTTA	NA	False	NA	NA	False	AATGAA	-15	NA	21898897	21911239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899040_21900505_21900595_21904941_21905026_21906708_21906836_21909120
ES.14431.38	chr17	+	3358	6	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10187	797	multi-exon	FALSE	canonical	0	0	junction_2	18.3847763108502	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCTTCCTCTTCATT	NA	False	NA	NA	False	TATAAA	-19	NA	21898900	21911818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899118_21900041_21900185_21900505_21900595_21904941_21905026_21906708_21906836_21909120
ES.14431.39	chr17	+	2708	5	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10187	290	multi-exon	FALSE	canonical	3	30	junction_1	5.44862367942584	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTGTGTGTTTGTG	NA	False	NA	NA	False	AAAAAG	-19	NA	21898900	21911311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899118_21900505_21900595_21904941_21905026_21906708_21906836_21909120
ES.14431.4	chr17	+	3396	8	Fusion	ENSMUSG00000117013.2_ENSMUSG00000067931.7	novel	2652	6	NA	NA	1	171	multi-exon	FALSE	canonical	0	0	junction_1	48.3431610932694	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGGGGAGCTTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	21787270	21854230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21787508_21794118_21794219_21803291_21803405_21805041_21805169_21831552_21831674_21848176_21848248_21849755_21849913_21851760
ES.14431.40	chr17	+	2593	2	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10182	558	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTTTGTGAGCACCA	NA	False	NA	8	True	AAAACA	-44	NA	21898905	21911579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899040_21909120
ES.14431.41	chr17	+	2883	5	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10168	562	multi-exon	FALSE	canonical	2	5	junction_1	14.790199457749	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTGAGCACCATTTA	NA	False	NA	12	True	NA	NA	NA	21898919	21911583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_21899040_21900505_21900595_21904941_21905026_21906708_21906836_21909120
ES.14431.5	chr17	+	4560	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	50.3942787758028	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787271	21808961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21787508_21789310_21791399_21794118_21794219_21803291_21803405_21805041_21805169_21806966_21807278_21807376
ES.14431.6	chr17	+	2549	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.6880194629171	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATGGAAAGATTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	21787272	21808960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966_21807278_21807376
ES.14431.7	chr17	+	3471	9	Fusion	ENSMUSG00000117013.2_ENSMUSG00000067931.7	novel	2652	6	NA	NA	5	171	multi-exon	FALSE	canonical	0	0	junction_5	50.2916494062384	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGGGGAGCTTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	21787274	21854230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21831552_21831674_21848176_21848248_21849755_21849913_21851760
ES.14431.8	chr17	+	4279	5	NIC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	7	-3	intron_retention	FALSE	canonical	3	80	junction_2	9.97496867163	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCATGGAAAGATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	21787276	21808958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21805169_21806966
ES.14431.9	chr17	+	3220	7	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	48.6815045873573	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCATGGAAAGATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	21787293	21808959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806273_21807278_21807376
ES.14432.1	chr17	-	1181	5	Antisense	novelGene_ENSMUSG00000067931.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAAATCAATACTGAAA	NA	False	NA	NA	False	NA	NA	NA	21807861	21794073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21794215_21803287_21803403_21805039_21805168_21806965_21807276_21807374
ES.14432.2	chr17	-	2975	4	Antisense	novelGene_ENSMUSG00000067931.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGCAAAAATCAATACT	NA	False	NA	NA	False	NA	NA	NA	21807861	21794077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_21794215_21803287_21803403_21805039_21807231_21807329
ES.14433.1	chr17	+	3254	1	Intergenic	novelGene_12125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTATATATGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	21913299	21916553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21913300_21916600
ES.14434.1	chr17	+	5235	5	ISM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-95	-14	-95	14	intron_retention	FALSE	canonical	3	47	junction_2	7.1239034243875	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTATGTAGCCGCCTG	NA	False	NA	23	True	AATAAA	-38	NA	21926627	21944631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924
ES.14434.10	chr17	+	5146	5	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-43	0	intron_retention	FALSE	canonical	2	4	junction_1	24.3040634462635	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926679	21944617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926853_21927591_21927704_21928185_21928278_21938027_21938104_21939924
ES.14434.11	chr17	+	4434	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.7402318613732	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926679	21944617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928201_21928278_21938027_21938119_21939924_21940052_21940785
ES.14434.12	chr17	+	6986	4	ISM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-40	1	-40	-1	intron_retention	FALSE	canonical	3	47	junction_2	5.24933858267454	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926682	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027
ES.14434.13	chr17	+	4426	7	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.7228345512423	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926687	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940388_21940572_21940968
ES.14434.14	chr17	+	4658	7	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.5297818532746	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926701	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21936970_21937217_21938027_21938104_21939924_21940052_21940785
ES.14434.15	chr17	+	4900	10	Fusion	ENSMUSG00000061544.14_ENSMUSG00000067928.7	novel	4209	6	NA	NA	-20	29	multi-exon	FALSE	canonical	0	0	junction_5	75.8684696785036	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCTTCCCATGGCC	NA	False	NA	41	True	NA	NA	NA	21926702	21967979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.16	chr17	+	4230	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.2929173784651	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGGAAATTCAATG	NA	False	NA	7	True	AATAAA	-22	NA	21926709	21944615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938017_21938104_21939924_21940052_21940968
ES.14434.17	chr17	+	4066	5	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.1665339699395	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGGAAATTCAATG	NA	False	NA	7	True	AATAAA	-22	NA	21926712	21944615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926853_21928201_21928278_21938027_21938104_21939924_21940052_21940968
ES.14434.18	chr17	+	4186	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	22.1990990808186	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGGAAATTCAATG	NA	False	NA	7	True	AATAAA	-22	NA	21926720	21944615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926853_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
ES.14434.19	chr17	+	1640	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.8662942242821	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926731	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21943527
ES.14434.2	chr17	+	4312	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-95	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	21.2941306467299	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATGTGGAAATT	NA	False	NA	2	True	AATAAA	-17	NA	21926627	21944610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938119_21939924_21940052_21940968
ES.14434.20	chr17	+	6855	4	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	91	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	26.8700576850888	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926813	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928201_21928278_21938011
ES.14434.21	chr17	+	4590	5	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	914	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.9651208354592	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21927636	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940388
ES.14434.22	chr17	+	2918	2	Fusion	ENSMUSG00000061544.14_ENSMUSG00000067928.7	novel	4209	6	NA	NA	-8256	-6	multi-exon	TRUE	non_canonical	0	0	junction_1	0	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATCAAGGACTTGTA	NA	False	NA	5	True	AATAAA	-19	NA	21941519	21967943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_21941532_21965037
ES.14434.23	chr17	+	4706	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-154	-3912	-154	4	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTGTATCATAGTAGCT	NA	False	NA	16	True	AATAAA	-30	NA	21949621	21967954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.24	chr17	+	3063	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-117	-2306	-117	-1601	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	21949658	21966348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.25	chr17	+	2721	5	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-107	-1869	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	84.6935652809586	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAATTTATAATGAAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	21949668	21966080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21950033_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.26	chr17	+	3500	5	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-106	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.22474487139159	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATCAAGGACTTGTA	NA	False	NA	5	True	AATAAA	-19	NA	21949669	21967943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21953779_21953947_21955038_21955103_21964922_21965057_21965171
ES.14434.27	chr17	+	4820	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	91.1055553861685	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21949669	21967949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21953779_21953947_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.28	chr17	+	4983	8	NNC	ENSMUSG00000061544.14	novel	4525	6	NA	NA	-106	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.4020493511967	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	10	True	AATAAA	-24	NA	21949669	21967948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21952775_21952940_21953779_21953947_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.29	chr17	+	4800	7	NNC	ENSMUSG00000061544.14	novel	4525	6	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.1654064182142	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21949669	21967949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21952775_21952940_21955038_21955103_21958415_21958498_21961476_21961604_21962860_21962939_21964027
ES.14434.3	chr17	+	4485	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-94	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	19.6611291639112	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTGGAAATTCAATGA	NA	False	NA	8	True	AATAAA	-23	NA	21926628	21944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940785
ES.14434.31	chr17	+	4700	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-95	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1055553861685	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	10	True	AATAAA	-24	NA	21949680	21967948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21954523_21954583_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.32	chr17	+	3162	7	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-95	-1599	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.8749140302207	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-25	NA	21949680	21966350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21950033_21953601_21953721_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.33	chr17	+	5731	5	ISM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-95	-3907	-95	0	intron_retention	FALSE	canonical	3	170	junction_1	16.3554272337961	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21949680	21967949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839
ES.14434.34	chr17	+	4630	6	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7234975347103	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949680	21967950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21955047_21955103_21958415_21958494_21961476_21961600_21962839_21962939_21964027
ES.14434.35	chr17	+	3917	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-95	-3182	-95	-725	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTCTGTTGACTACAC	NA	False	NA	NA	False	AATAAA	-18	NA	21949680	21967224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.36	chr17	+	8034	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-87	-7307	-87	3399	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCGTTTGGGGGTTTTA	NA	False	NA	NA	False	TATAAA	-17	NA	21949688	21971349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.37	chr17	+	3026	2	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-83	3392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGACTTTCGTTTGGG	NA	False	NA	NA	False	TATAAA	-10	NA	21949692	21971342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21949858_21968481
ES.14434.38	chr17	+	3138	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-83	-2415	-83	-1492	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTGAGAACTTAACAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	21949692	21966457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.39	chr17	+	4337	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.7017356058338	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	10	True	AATAAA	-24	NA	21949692	21967948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027_21964631_21964922
ES.14434.4	chr17	+	4292	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	-83	0	-83	0	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926639	21944617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
ES.14434.40	chr17	+	4794	7	NNC	ENSMUSG00000061544.14	novel	4525	6	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	87.1749518051041	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21949692	21967949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21952775_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.43	chr17	+	5418	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	90.3998832349295	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949708	21967950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21953779_21954583_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.44	chr17	+	5859	6	NNC	ENSMUSG00000061544.14	novel	4525	6	NA	NA	-65	-6	intron_retention	FALSE	canonical	3	5	junction_1	89.7070788734089	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATCAAGGACTTGTA	NA	False	NA	5	True	AATAAA	-19	NA	21949710	21967943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21952775_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839
ES.14434.45	chr17	+	2750	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-65	-2045	-65	-1862	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATGAAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-28	NA	21949710	21966087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.46	chr17	+	2726	6	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-63	-1868	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.7691577574674	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTATAATGAAGAC	NA	False	NA	NA	False	ATTAAA	-22	NA	21949712	21966081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21955038_21955103_21958415_21958494_21961346_21961458_21962839_21962939_21964027
ES.14434.47	chr17	+	3889	8	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-63	-1604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.8862313388062	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTGTTT	NA	False	NA	8	True	AATAAA	-20	NA	21949712	21966345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21953779_21954583_21955038_21955103_21958415_21958494_21960762_21960843_21961476_21961604_21962839_21962939_21964027
ES.14434.48	chr17	+	3293	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-59	-2594	-59	-1313	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAGAAGCCAGTGTACT	NA	False	NA	NA	False	AATAAA	-19	NA	21949716	21966636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.49	chr17	+	2802	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-58	-1862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1055553861685	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATGAAGACAATGTG	NA	False	NA	NA	False	ATTAAA	-28	NA	21949717	21966087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21954523_21954583_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.5	chr17	+	4592	7	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-74	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.1702451630864	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGGAAATTCAATG	NA	False	NA	7	True	AATAAA	-22	NA	21926648	21944615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21932422_21932551_21938027_21938104_21939924_21940052_21940785
ES.14434.50	chr17	+	4674	7	NNC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.2262145560267	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	10	True	AATAAA	-24	NA	21949727	21967948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21950033_21955038_21955103_21958415_21958494_21960762_21960843_21961476_21961604_21962839_21962939_21964027
ES.14434.51	chr17	+	4512	5	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	84.6935652809586	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGACTTGTATCATA	NA	False	NA	10	True	AATAAA	-24	NA	21949745	21967948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21950033_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.52	chr17	+	1397	7	NNC	ENSMUSG00000061544.14	novel	653	6	NA	NA	2	633	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	93.949306661743	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTCCTTTACCTGT	NA	False	NA	3	True	AATAAA	-16	NA	21952662	21988956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21967943_21968013_21988273
ES.14434.53	chr17	+	4564	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	-38	-1	6	0	multi-exon	FALSE	canonical	3	15	junction_1	72.3756865252413	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21952666	21967950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.54	chr17	+	3051	7	NIC	ENSMUSG00000061544.14	novel	4525	6	NA	NA	0	-1604	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	90.6378630717992	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTGTTT	NA	False	NA	8	True	AATAAA	-20	NA	21952693	21966345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21952940_21953601_21953721_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.55	chr17	+	4145	4	ISM	ENSMUSG00000061544.14	ENSMUST00000182603.2	4315	6	3521	84	3521	-83	3prime_fragment	FALSE	canonical	3	177	junction_1	14.8174071805952	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAACTGTTGCAATCAT	NA	False	NA	-72	True	CATAAA	-26	NA	21958413	21967866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21958494_21961476_21961604_21962839_21962939_21964027
ES.14434.56	chr17	+	1710	1	ISM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	13317	218	11129	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCATAGACATTTGGT	2429	False	NA	NA	False	AATACA	-22	NA	21966021	21967731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_21966000_21967700
ES.14434.57	chr17	+	1136	1	Intergenic	novelGene_12127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAATAAGAAAAGTA	4716	False	NA	NA	False	TTTAAA	-5	NA	21968308	21969444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_21968300_21969400
ES.14434.6	chr17	+	4294	6	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-72	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.2929173784651	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATGTGGAAATTCAAT	NA	False	NA	6	True	AATAAA	-21	NA	21926650	21944614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927591_21927704_21928185_21928278_21938011_21938104_21939924_21940052_21940968
ES.14434.7	chr17	+	3989	3	NIC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-65	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTATGTGGAAATTCA	NA	False	NA	4	True	AATAAA	-19	NA	21926657	21944612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_21926876_21939924_21940052_21940968
ES.14434.9	chr17	+	5133	5	NNC	ENSMUSG00000067928.7	novel	4209	6	NA	NA	-44	-7	intron_retention	FALSE	canonical	0	0	junction_1	25.9651208354592	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATGTGGAAATT	NA	False	NA	2	True	AATAAA	-17	NA	21926678	21944610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_21926876_21927621_21927704_21928185_21928278_21938027_21938104_21939924
ES.14435.1	chr17	-	4777	1	Intergenic	novelGene_12126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCTTAGCTCGTTATT	NA	False	NA	NA	False	NA	NA	NA	21949513	21944736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21944700_21949500
ES.14436.1	chr17	-	173	1	Intergenic	novelGene_12128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTCCCACCCAA	NA	False	NA	NA	False	NA	NA	NA	21970697	21970524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21970500_21970700
ES.14437.1	chr17	-	173	1	Intergenic	novelGene_12129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATGGTT	NA	False	NA	NA	False	NA	NA	NA	21974549	21974376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_21974400_21974500
ES.14438.1	chr17	+	1347	1	Intergenic	novelGene_12130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCCTGATACATGCTC	NA	False	NA	NA	False	NA	NA	NA	22046578	22047925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22046600_22047900
ES.14439.1	chr17	+	196	1	Intergenic	novelGene_12131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGGTTTAGATA	NA	False	NA	NA	False	NA	NA	NA	22079103	22079299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22079100_22079300
ES.1444.1	chr1	+	1983	6	NNC	ENSMUSG00000026421.15	novel	1828	6	NA	NA	-33142	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.886486724827	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCTTTCCTGTCTGT	NA	False	NA	22	True	AATAAA	-15	NA	135614656	135679968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135614947_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.11	chr1	+	1697	5	ISM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	10249	2	10249	-2	3prime_fragment	FALSE	canonical	3	436	junction_2	26.9478663348325	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCTTTCCTGTCTGT	NA	False	NA	22	True	AATAAA	-15	NA	135667133	135679968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.12	chr1	+	4050	1	NIC	ENSMUSG00000026421.15	novel	1828	6	NA	NA	19036	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	2192	False	NA	24	True	AATAAA	-17	NA	135675920	135679970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135675900_135680000
ES.1444.2	chr1	+	181	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGGGTGGGATGC	NA	False	NA	NA	False	NA	NA	NA	135620257	135620438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135620300_135620400
ES.1444.3	chr1	+	174	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGCGTATGC	NA	False	NA	NA	False	NA	NA	NA	135631042	135631216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135631000_135631200
ES.1444.4	chr1	+	2175	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	-349	2	-349	-2	multi-exon	FALSE	canonical	3	16	junction_1	177.543684765187	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCTTTCCTGTCTGT	NA	False	NA	22	True	AATAAA	-15	NA	135647449	135679968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.5	chr1	+	2080	6	NNC	ENSMUSG00000026421.15	novel	1828	6	NA	NA	-240	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.886486724827	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135647558	135679965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135647949_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.6	chr1	+	1836	6	NNC	ENSMUSG00000026421.15	novel	1828	6	NA	NA	4480	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	183.489945228615	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTGCTTTCCTGTC	NA	False	NA	19	True	AATAAA	-12	NA	135652278	135679965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135652425_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.7	chr1	+	1849	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	-28	2	-28	-2	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCTTTCCTGTCTGT	NA	False	NA	22	True	AATAAA	-15	NA	135656856	135679968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.8	chr1	+	1671	5	NIC	ENSMUSG00000026421.15	novel	1823	6	NA	NA	36	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	190.271516523099	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCTGCTTTCCTGTCTG	NA	False	NA	21	True	AATAAA	-14	NA	135656920	135679967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135657013_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ES.1444.9	chr1	+	3439	4	NIC	ENSMUSG00000026421.15	novel	1823	6	NA	NA	61	0	intron_retention	FALSE	canonical	3	392	junction_1	44.9097861149314	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135656945	135679970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135657013_135667137_135667251_135672996_135674588_135678302
ES.14440.1	chr17	-	3819	6	NNC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	13.6674796506159	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064739	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22039170_22040050_22040178_22042824_22042873_22059126_22059250_22059604_22059696_22064624
ES.14440.13	chr17	-	4028	8	Fusion	ENSMUSG00000069743.6_ENSMUSG00000078546.9	novel	3686	5	NA	NA	0	2	multi-exon	FALSE	canonical	0	0	junction_3	18.6624144816718	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCGAACTTGGTTGTGC	NA	False	NA	-10	True	NA	NA	NA	22128620	22035863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_22039170_22040050_22040178_22042824_22042873_22063404_22063553_22064624_22064742_22106291_22106340_22127029_22127178_22128534
ES.14440.14	chr17	-	3588	4	NIC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	20.6774165590278	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCGAACTTGGTTGTG	NA	False	NA	-11	True	NA	NA	NA	22064732	22035864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22039170_22040050_22040178_22042824_22042873_22064624
ES.14440.15	chr17	-	2633	5	FSM	ENSMUSG00000078546.9	ENSMUST00000190066.7	2221	5	247	-659	-40	659	multi-exon	TRUE	canonical	2	10	junction_1	2.29128784747792	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTCGTTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22128660	22097891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029_22127178_22128534
ES.14440.16	chr17	-	2613	5	NNC	ENSMUSG00000078546.9	novel	2221	5	NA	NA	-21	658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.01560470775798	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTTCGTTGTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	22128641	22097892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22100076_22100938_22101060_22106285_22106340_22127029_22127178_22128534
ES.14440.17	chr17	-	3482	4	NIC	ENSMUSG00000078546.9	novel	1744	4	NA	NA	3593	657	intron_retention	FALSE	canonical	0	0	junction_3	6.23609564462324	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAACTTCGTTGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	22123480	22097893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22100076_22100938_22101066_22106291_22106340_22122355
ES.14440.2	chr17	-	4128	9	Fusion	ENSMUSG00000069743.6_ENSMUSG00000078546.9	novel	3686	5	NA	NA	0	11	multi-exon	FALSE	canonical	1	1	junction_5	16.6883192682786	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22128620	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22063404_22063553_22064624_22064742_22106291_22106340_22127029_22127178_22128534
ES.14440.3	chr17	-	3984	8	Fusion	ENSMUSG00000069743.6_ENSMUSG00000078546.9	novel	3686	5	NA	NA	-4	11	multi-exon	FALSE	canonical	1	1	junction_5	15.9527363144499	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22128624	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624_22064742_22106291_22106340_22127029_22127178_22128534
ES.14440.4	chr17	-	3891	6	NNC	ENSMUSG00000069743.6	novel	2735	5	NA	NA	-39	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	17.5430898076707	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064792	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22039170_22040050_22040178_22042824_22042873_22059126_22059250_22059585_22059696_22064624
ES.14440.5	chr17	-	3740	5	FSM	ENSMUSG00000069743.6	ENSMUST00000232918.2	2735	5	-11	-994	-11	11	multi-exon	FALSE	canonical	3	6	junction_3	16.8077363139716	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064764	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059585_22059696_22064624
ES.14440.6	chr17	-	3817	5	NNC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	-109	11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.497844667398	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064862	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22039168_22040050_22040172_22042818_22042873_22059604_22059696_22064624
ES.14440.7	chr17	-	3757	6	NNC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	8	11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	18.9799894625893	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGCTCAATTTCC	NA	False	NA	-1	True	NA	NA	NA	22064732	22035854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22063404_22063473_22064624
ES.14440.8	chr17	-	3707	5	NNC	ENSMUSG00000069743.6	novel	3686	5	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3002590656188	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTTGTGCTCAATTT	NA	False	NA	-3	True	NA	NA	NA	22064740	22035856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22039182_22040050_22040178_22042824_22042873_22059604_22059696_22064624
ES.14440.9	chr17	-	3962	8	Fusion	ENSMUSG00000069743.6_ENSMUSG00000078546.9	novel	3686	5	NA	NA	-21	9	multi-exon	FALSE	non_canonical	0	0	junction_5	19.6749089150706	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTTGTGCTCAATTT	NA	False	NA	-3	True	NA	NA	NA	22128641	22035856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624_22064742_22122656_22122752_22123491_22123556_22128534
ES.14441.1	chr17	+	2794	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	-53	0	-53	0	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181479	22213347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ES.14441.2	chr17	+	4231	5	NNC	ENSMUSG00000053347.16	novel	1338	6	NA	NA	-33	24244	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	9.09326673973661	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGGTTGAAGTTT	NA	False	NA	NA	False	AATAAA	-29	NA	22181499	22237591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22181801_22207011_22207083_22209759_22209887_22225286_22225364_22233936
ES.14441.3	chr17	+	3923	3	FSM	ENSMUSG00000053347.16	ENSMUST00000153985.8	1598	3	-6	-2319	1	-3	multi-exon	FALSE	canonical	3	19	junction_1	3	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181533	22213344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22181801_22207011_22207083_22209759
ES.14441.4	chr17	+	1592	5	NNC	ENSMUSG00000053347.16	novel	1338	6	NA	NA	0	18396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.44722181384559	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTATAAGATCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	22181539	22231743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22181801_22207011_22207083_22209759_22209887_22225286_22225364_22230687
ES.14441.5	chr17	+	2331	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	34	376	0	-376	multi-exon	FALSE	canonical	3	11	junction_3	5.73488351136175	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATATTCTATGACAGTT	NA	False	NA	NA	False	AATAAA	-26	NA	22181566	22212971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ES.14441.6	chr17	+	5531	3	ISM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	22418	3	22384	-3	3prime_fragment	FALSE	canonical	3	11	junction_2	7	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22203950	22213344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22207083_22209759_22209887_22211072
ES.14441.7	chr17	+	1185	2	ISM	ENSMUSG00000053347.16	ENSMUST00000153985.8	1598	3	25497	127	25470	-127	3prime_fragment	FALSE	canonical	3	25	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACATTTGTGGTTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	22207036	22210898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22207083_22209759
ES.14442.1	chr17	-	3175	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-19	2	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_3	29.5607848339654	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTGGTTGTTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	22181464	22145938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22172962_22181236
ES.14442.11	chr17	-	3125	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	30.2033110767677	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181470	22145943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181411
ES.14442.12	chr17	-	3285	7	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	35.8034759330556	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22181455	22145943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22180268_22180320_22181236
ES.14442.13	chr17	-	3180	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-206	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	34.0388013890031	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181651	22145945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22172962_22181411
ES.14442.14	chr17	-	3098	5	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	33.5484723944325	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181468	22145945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22172962_22181236
ES.14442.15	chr17	-	3248	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	29.6040537764678	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181459	22145945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152056_22160706_22160832_22172868_22173035_22181236
ES.14442.16	chr17	-	3179	5	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-206	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.6853751473964	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181651	22145945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22173035_22181411
ES.14442.17	chr17	-	3243	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	32.2775463751506	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22181468	22145945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172982_22181236
ES.14442.19	chr17	-	9567	5	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-24	-1048	intron_retention	FALSE	canonical	3	30	junction_4	22.9169696949662	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTACCATTGGTC	NA	False	NA	NA	False	TATAAA	-21	NA	22181469	22148214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22160832_22172868_22172962_22181236
ES.14442.2	chr17	-	3497	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-232	0	-219	0	multi-exon	FALSE	canonical	3	43	junction_3	17.9041894538681	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181664	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
ES.14442.20	chr17	-	927	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	10	-1051	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	26.7776025812618	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTCTACCATTG	NA	False	NA	NA	False	TATAAA	-18	NA	22181422	22148217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
ES.14442.21	chr17	-	1008	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-23	2280	-10	-1054	multi-exon	FALSE	canonical	3	43	junction_3	17.9041894538681	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTTGTGTTCTACCA	NA	False	NA	NA	False	TATAAA	-15	NA	22181455	22148220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
ES.14442.22	chr17	-	2322	3	NNC	ENSMUSG00000071267.12	novel	1461	3	NA	NA	-1918	-1056	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAATTTGTGTTCTAC	NA	False	NA	NA	False	TATAAA	-13	NA	22153921	22148222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149469_22151969
ES.14442.23	chr17	-	882	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	-34	2417	-21	-1191	multi-exon	FALSE	canonical	3	43	junction_3	17.9041894538681	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCATCCAGGAATACAC	NA	False	NA	NA	False	TATAAA	-16	NA	22181466	22148357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
ES.14442.24	chr17	-	3322	4	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-9	-3357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2640830811685	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGTCTAATACTAGCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	22181454	22150523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22153337_22160706_22160832_22172868_22173035_22181236
ES.14442.25	chr17	-	2530	3	FSM	ENSMUSG00000071267.12	ENSMUST00000126485.2	2481	3	-24	-25	-24	25	multi-exon	FALSE	canonical	3	50	junction_2	18	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAGACAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	22181469	22158700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22160832_22172868_22173035_22181236
ES.14442.26	chr17	-	2476	3	NNC	ENSMUSG00000071267.12	novel	2481	3	NA	NA	-43	25	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	28	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAGACAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	22181488	22158700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22160832_22172868_22172962_22181236
ES.14442.27	chr17	-	2508	4	NNC	ENSMUSG00000071267.12	novel	2481	3	NA	NA	-24	25	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	36.5908306668336	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAGACAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	22181469	22158700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22160832_22172868_22172962_22180268_22180320_22181236
ES.14442.28	chr17	-	3537	1	Intergenic	novelGene_12132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGTGTAACTCTAACTA	NA	False	NA	NA	False	NA	NA	NA	22168454	22164917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22164900_22168500
ES.14442.3	chr17	-	3190	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	31.9437004744284	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181469	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152056_22160706_22160832_22172868_22172962_22181236
ES.14442.4	chr17	-	3265	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-235	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	29.1849276168367	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181680	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181411
ES.14442.5	chr17	-	3162	5	NIC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	32.101401838549	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181454	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22148471_22149346_22149474_22151973_22152095_22172868_22173035_22181236
ES.14442.6	chr17	-	3255	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	26.7776025812618	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181473	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
ES.14442.7	chr17	-	3295	7	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	33.0088372005639	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181484	22145940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22180268_22180320_22181236
ES.14442.8	chr17	-	3409	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	-206	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	22.8508205541945	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22181651	22145942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
ES.14442.9	chr17	-	8187	3	FSM	ENSMUSG00000071267.12	ENSMUST00000074295.8	1461	3	-5503	-1223	-5503	-3	multi-exon	FALSE	canonical	3	71	junction_1	7.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGGACTTGGTTGTTT	8490	False	NA	NA	False	NA	NA	NA	22157506	22145943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22148471_22149346_22149474_22151973
ES.14443.1	chr17	-	4454	2	Genic_Genomic	ENSMUSG00000086004.2_ENSMUSG00000099397.2	novel	448	1	NA	NA	123	542	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22187100	22182574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_22185397_22185468
ES.14444.1	chr17	-	3031	1	Intergenic	novelGene_12133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAGGACCAAATGGGT	NA	False	NA	NA	False	NA	NA	NA	22198382	22195351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22195400_22198400
ES.14445.1	chr17	+	2520	1	Intergenic	novelGene_12134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22238030	22240550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22238000_22240600
ES.14446.1	chr17	-	3600	5	NNC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	-31	131026	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.53962995154008	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATTGTTTCAGGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	22444628	22285219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22285287_22417541_22420791_22421656_22421784_22424285_22424334_22444519
ES.14446.10	chr17	-	3716	5	NNC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	1	-1230	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	2.1650635094611	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCATTGTTTCATTTTT	NA	False	NA	-12	True	AATAAA	-13	NA	22444596	22417475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443141_22444519
ES.14446.2	chr17	-	2963	4	NNC	ENSMUSG00000117234.2	novel	1756	2	NA	NA	-11653	617	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGATCTTGGCTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	22300522	22285627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22287883_22288751_22288879_22297569_22297618_22299989
ES.14446.3	chr17	-	5576	1	Intergenic	novelGene_12135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCTGTTTGTTCGTGA	NA	False	NA	NA	False	NA	NA	NA	22362150	22356574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22356600_22362200
ES.14446.4	chr17	-	2960	1	Genic_Genomic	ENSMUSG00000063383.6	novel	NA	NA	NA	NA	21370	2498	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGCAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	22363801	22360841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_22360800_22363800
ES.14446.5	chr17	-	2725	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	151	-4	151	4	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTCCATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22385020	22363335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
ES.14446.6	chr17	-	2517	4	NIC	ENSMUSG00000063383.6	novel	2872	5	NA	NA	208	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	10.6770782520313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTTTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	22384963	22363337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22365516_22366369_22366497_22369015_22369064_22384799
ES.14446.7	chr17	-	4929	5	FSM	ENSMUSG00000096433.3	ENSMUST00000179996.3	4882	5	-40	-7	-40	7	multi-exon	FALSE	canonical	2	8	junction_3	10.6066017177982	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTCAGCAAATAG	NA	False	NA	NA	False	NA	NA	NA	22444637	22416238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443076_22444519
ES.14446.8	chr17	-	4864	4	NIC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	-61	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	4.18993502999218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTCCTTCAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	22444658	22416240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22420791_22421656_22421784_22424285_22424334_22444519
ES.14446.9	chr17	-	3671	5	FSM	ENSMUSG00000096433.3	ENSMUST00000179996.3	4882	5	-16	1227	-16	-1227	multi-exon	FALSE	canonical	2	8	junction_3	10.6066017177982	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTTTCATTTTTTCT	NA	False	NA	-9	True	AATAAA	-16	NA	22444613	22417472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22420791_22421656_22421784_22424285_22424334_22442991_22443076_22444519
ES.14447.1	chr17	-	1064	1	Intergenic	novelGene_12136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATATTACAGA	NA	False	NA	NA	False	NA	NA	NA	22496928	22495864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22495900_22496900
ES.14448.1	chr17	+	3618	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	-23	-622	-23	621	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACCTGTATGATATATT	NA	False	NA	NA	False	AATATA	-24	NA	22580410	22596883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ES.14448.10	chr17	+	2840	6	NNC	ENSMUSG00000044501.18	novel	2973	4	NA	NA	137	10334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3535526454447	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATTCTACCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	22580639	22606596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22580689_22585993_22586085_22590971_22591070_22592623_22592751_22593768_22595884_22606236
ES.14448.11	chr17	+	4630	3	ISM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	8549	9	8549	-8	3prime_fragment	FALSE	canonical	3	39	junction_1	0.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACCATTCTAGTC	NA	False	NA	16	True	AATAAA	-16	NA	22589051	22596253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22591070_22592623_22592751_22593768
ES.14448.12	chr17	+	5058	2	ISM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	11137	-1453	11137	1453	3prime_fragment	FALSE	canonical	3	40	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22591639	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22592751_22593768
ES.14448.13	chr17	+	5086	1	Genic_Genomic	ENSMUSG00000044501.18	novel	NA	NA	NA	NA	12127	1453	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22592629	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_22592600_22597700
ES.14448.14	chr17	+	3084	1	Genic_Genomic	ENSMUSG00000044501.18	novel	NA	NA	NA	NA	14956	2280	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAACCAATACATGTG	NA	False	NA	NA	False	NA	NA	NA	22595458	22598542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_22595500_22598500
ES.14448.15	chr17	+	5301	1	Intergenic	novelGene_12139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGTCATATTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	22599716	22605017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22599700_22605000
ES.14448.16	chr17	+	3611	1	Intergenic	novelGene_12140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATTCTACCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	22602985	22606596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22603000_22606600
ES.14448.17	chr17	+	1454	1	Intergenic	novelGene_12141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	22606875	22608329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22606900_22608300
ES.14448.2	chr17	+	3028	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	1	-56	1	55	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGTGTATTGTTAAT	NA	False	NA	80	True	AGTAAA	-14	NA	22580434	22596317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ES.14448.3	chr17	+	4378	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	-65	-1453	2	1453	multi-exon	FALSE	canonical	3	6	junction_1	15.7973274814304	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580437	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
ES.14448.4	chr17	+	2861	3	FSM	ENSMUSG00000044501.18	ENSMUST00000149699.8	2876	3	17	-2	15	2	multi-exon	FALSE	canonical	2	8	junction_1	16	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGTCATTTATCTTTT	NA	False	NA	27	True	AATAAA	-27	NA	22580450	22596264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22592623_22592751_22593768
ES.14448.5	chr17	+	3839	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	17	-883	15	882	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTATTGTCCTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	22580450	22597144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ES.14448.6	chr17	+	2572	4	NNC	ENSMUSG00000044501.18	novel	2973	4	NA	NA	15	16627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4181471413663	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGCTCATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	22580450	22612889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22580689_22590971_22591070_22592623_22592751_22610780
ES.14448.7	chr17	+	4406	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	21	-1454	19	1453	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580454	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ES.14448.8	chr17	+	4308	3	FSM	ENSMUSG00000044501.18	ENSMUST00000149699.8	2876	3	21	-1453	19	1453	multi-exon	FALSE	canonical	2	8	junction_1	16	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580454	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22580689_22592623_22592751_22593768
ES.14448.9	chr17	+	4527	5	NNC	ENSMUSG00000044501.18	novel	2973	4	NA	NA	-32	1453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.753164303473	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGACATTACCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	22580470	22597715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22580689_22587989_22588127_22590971_22591070_22592623_22592751_22593768
ES.14449.1	chr17	-	3571	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533805	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ES.14449.10	chr17	-	3641	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	18.4541473808885	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	22533812	22504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532367_22533727
ES.14449.11	chr17	-	3495	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	-23	2	-23	-2	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	22533841	22504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ES.14449.12	chr17	-	3720	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.2957721544892	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTGTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	22533816	22504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508929_22509669_22509732_22511388_22511437_22528185_22528257_22528485_22528579_22532217_22532367_22533727
ES.14449.16	chr17	-	3816	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	17.3075422983208	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	22533841	22504855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.17	chr17	-	3466	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.1660104885167	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	22533821	22504855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533734
ES.14449.18	chr17	-	3676	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.5063480549834	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	22533813	22504855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508871_22511384_22511437_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.19	chr17	-	3551	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	18.46994555728	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	22533837	22504855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22509669_22509732_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ES.14449.2	chr17	-	3521	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.7696370249929	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533813	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508929_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ES.14449.20	chr17	-	3509	5	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6936114358204	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTTGGCTGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	22533841	22504856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22528485_22528579_22532217_22532367_22533727
ES.14449.21	chr17	-	3739	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.3461491083436	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTTGGCTGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	22533813	22504856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.22	chr17	-	3521	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.9868012003477	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAACTTGGCTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	22533800	22504857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528257_22528485_22528579_22532217_22532302_22533727
ES.14449.23	chr17	-	3586	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18.0510387512741	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAACTTGGCTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	22533813	22504857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508835_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.24	chr17	-	3494	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	36	-9	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	19.8635344286962	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAACTTGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	22533782	22504860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532367_22533727
ES.14449.25	chr17	-	3712	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-34	-9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	18.5779140080066	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAACTTGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	22533852	22504860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.26	chr17	-	3640	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-49	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	19.9332218503014	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAACTTGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	22533867	22504861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22509669_22509732_22511388_22511437_22528485_22528579_22532217_22532367_22533727
ES.14449.27	chr17	-	3582	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.1363408349735	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTGAACTTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	22533812	22504862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511452_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ES.14449.28	chr17	-	3538	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-19	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.939534045447	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGTTGAACTTGGCTG	NA	False	NA	NA	False	NA	NA	NA	22533837	22504863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22522834_22522892_22528485_22528579_22532217_22532302_22533727
ES.14449.3	chr17	-	3865	9	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	16.3243491447592	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533824	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22509669_22509732_22511388_22511437_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.30	chr17	-	4678	1	NIC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	23580	-709	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTATGAATGTGATATATG	9143	False	NA	NA	False	AATACA	-42	NA	22510238	22505560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22505600_22510200
ES.14449.31	chr17	-	3014	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-36	-709	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	18.5779140080066	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTATGAATGTGATATATG	NA	False	NA	NA	False	AATACA	-42	NA	22533854	22505560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22531009_22531223_22532217_22532302_22533727
ES.14449.32	chr17	-	2870	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	5	-709	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTATGAATGTGATATATG	NA	False	NA	NA	False	AATACA	-42	NA	22533813	22505560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ES.14449.33	chr17	-	2772	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-20	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.0940749974963	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AATACA	-20	NA	22533838	22505582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22528185_22528243_22528485_22528579_22532217_22532302_22533727
ES.14449.34	chr17	-	3145	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-14	-731	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	19.6011244991876	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AATACA	-20	NA	22533832	22505582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532367_22533727
ES.14449.35	chr17	-	4602	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-8	1883	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGCTTTGTCTTTA	NA	False	NA	NA	False	ACTAAA	-21	NA	22580389	22555086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.36	chr17	-	5349	5	NIC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-13	6	intron_retention	FALSE	canonical	3	51	junction_3	23.0217288664427	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTTTTCAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580394	22556963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22559089_22559947_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.37	chr17	-	2666	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	50	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	36.5239647354993	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGTTTTCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	22580331	22556964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560069_22562614_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.38	chr17	-	2748	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-33	4	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGTTGTTTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	22580414	22556965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.39	chr17	-	2785	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	3	-4	3	4	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGTTGTTTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	22580378	22556965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.4	chr17	-	3495	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.8504004539963	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533824	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511452_22528485_22528579_22532217_22532302_22533727
ES.14449.40	chr17	-	2792	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.3868107973205	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGTTGTTTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	22580361	22556965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560099_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.41	chr17	-	5222	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-9	3	intron_retention	FALSE	canonical	1	2	junction_5	33.7496666650206	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGGTTGTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	22580390	22556966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580322
ES.14449.42	chr17	-	5278	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-18	3	intron_retention	FALSE	canonical	3	53	junction_2	18.6329680942141	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGGTTGTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	22580399	22556966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.43	chr17	-	5347	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	35	-2	intron_retention	FALSE	canonical	3	15	junction_3	33.5237229436111	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22580346	22556971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580148
ES.14449.44	chr17	-	2722	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.3868107973205	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22580365	22556973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560033_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.45	chr17	-	2872	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.7701381164186	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	22580363	22556973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560131_22562620_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580148
ES.14449.48	chr17	-	2562	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	38.3927076409049	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22580411	22556974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580322
ES.14449.49	chr17	-	6096	4	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	15	-5	intron_retention	FALSE	canonical	3	53	junction_1	17.9691092959247	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGGACTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	22580366	22556974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.5	chr17	-	3646	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	21.0674330352295	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533823	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22522834_22522892_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ES.14449.50	chr17	-	2777	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAAGTTGGACTTGGTT	NA	False	NA	NA	False	NA	NA	NA	22580400	22556976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
ES.14449.51	chr17	-	856	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-11	-1866	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTCTATCATTG	NA	False	NA	-3	True	TATAAA	-18	NA	22580392	22558835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.52	chr17	-	4226	4	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	24	-1867	intron_retention	FALSE	non_canonical	0	0	junction_3	31.8224239596337	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580357	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22562675_22577803_22577897_22578420_22578511_22580152
ES.14449.53	chr17	-	895	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	3	-1867	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580378	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
ES.14449.54	chr17	-	3401	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-11	-1867	intron_retention	FALSE	canonical	3	53	junction_2	18.6329680942141	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580392	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.55	chr17	-	3463	5	NIC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	-1867	intron_retention	FALSE	canonical	3	51	junction_3	23.0217288664427	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580381	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_22559089_22559947_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.56	chr17	-	930	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	-13	1867	-13	-1867	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580394	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.57	chr17	-	798	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	35	-1867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.8480109674878	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGTTCTATCATT	NA	False	NA	-4	True	TATAAA	-17	NA	22580346	22558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578431_22578506_22580148
ES.14449.58	chr17	-	2464	4	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	-33	-3584	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	23.5843639350783	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAATGTTTGTTGGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	22580414	22560553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22562675_22577803_22577970_22578420_22578506_22580322
ES.14449.59	chr17	-	2190	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	2	-3584	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.7517482090037	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAATGTTTGTTGGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	22580379	22560553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22562281_22562620_22562675_22577803_22577897_22578420_22578506_22580148
ES.14449.6	chr17	-	3501	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.9868012003477	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533788	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528243_22528485_22528579_22532217_22532302_22533727
ES.14449.60	chr17	-	2118	4	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	20	4051	20	-4051	5prime_fragment	FALSE	canonical	3	51	junction_2	21.2289111041209	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTTGGAATGTTGACT	NA	False	NA	NA	False	CATAAA	-29	NA	22580361	22561020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.61	chr17	-	4459	2	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	-309	4133	-309	-4133	intron_retention	FALSE	canonical	3	53	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTCTAATACTGGCTT	NA	False	NA	NA	False	GATAAA	-16	NA	22580690	22561102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_22562675_22577803
ES.14449.62	chr17	-	1916	4	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	1	4272	1	-4272	5prime_fragment	FALSE	canonical	3	51	junction_2	21.2289111041209	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAATGCATTGTCACAT	NA	False	NA	NA	False	ATTAAA	-34	NA	22580380	22561241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_22562675_22577803_22577970_22578420_22578506_22580148
ES.14449.63	chr17	-	5361	1	Intergenic	novelGene_12137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATCAGATTTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	22570457	22565096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22565100_22570500
ES.14449.7	chr17	-	3466	5	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.5454170416786	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533838	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22532217_22532367_22533727
ES.14449.8	chr17	-	3739	7	Fusion	ENSMUSG00000033972.10_ENSMUSG00000117284.2	novel	3474	6	NA	NA	1	0	multi-exon	TRUE	non_canonical	0	0	junction_3	34.3252417649493	214	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22580380	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_22507883_22508749_22508877_22511388_22511452_22528450_22528531_22577848_22577970_22578420_22578506_22580148
ES.14449.9	chr17	-	3555	6	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.0665436650179	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533837	22504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22507883_22508749_22508877_22528185_22528296_22528485_22528579_22532217_22532302_22533727
ES.1445.1	chr1	-	10270	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-22213	-1510	combination_of_known_junctions	TRUE	canonical	3	42	junction_19	13.5294641431211	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTTCTCCTGGCAA	NA	False	NA	NA	False	NA	NA	NA	135460402	135363827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086
ES.1445.12	chr1	-	7897	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-17	503	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	17.2810184885035	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTGATGTCTGTGCA	3348	False	NA	-9	True	AATAAA	-26	NA	135438139	135366082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
ES.1445.14	chr1	-	10077	32	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-51	502	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	20.5943426962992	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGACCTGATGTCTGTGC	NA	False	NA	-10	True	AATAAA	-25	NA	135615894	135366083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.15	chr1	-	5813	19	NNC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	1724	495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.5660483213545	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCTAAGGGACCTGATG	NA	False	NA	-17	True	AATAAA	-18	NA	135393687	135366090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382277_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576
ES.1445.17	chr1	-	9788	32	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-243	21	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	20.5943426962992	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATCATGGTTCGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	135616086	135366564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.18	chr1	-	9523	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_28	16.8865495455867	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135615868	135366587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.19	chr1	-	7398	30	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-57	-1988	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	19.7508861313272	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTCTATTTTTTCCTT	NA	False	NA	-9	True	AATAAA	-24	NA	135615900	135368573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.2	chr1	-	5261	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	141522	2139	10074	2129	3prime_fragment	FALSE	canonical	3	94	junction_1	0	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCACCTATTTATGCT	3712	False	NA	NA	False	NA	NA	NA	135371571	135364456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_135369518_135371371
ES.1445.20	chr1	-	7743	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-233	-1990	combination_of_known_junctions	FALSE	canonical	3	17	junction_28	16.8865495455867	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTCTATTTTTTCC	NA	False	NA	-11	True	AATAAA	-22	NA	135616076	135368575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.22	chr1	-	5382	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	2	-1993	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	17.2810184885035	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	3367	False	NA	-14	True	AATAAA	-19	NA	135438120	135368578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
ES.1445.25	chr1	-	3557	20	NNC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	1681	-1993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	23.4576296290063	151	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	NA	False	NA	-14	True	AATAAA	-19	NA	135393730	135368578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135392828_135392954_135393576
ES.1445.26	chr1	-	4964	25	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-15	-1993	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	20.926292605768	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	3350	False	NA	-14	True	AATAAA	-19	NA	135438137	135368578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135398217_135398909_135399896_135400195_135400470_135400610_135437941
ES.1445.27	chr1	-	7797	33	NNC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-46	-1993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	22.3424824815306	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	NA	False	NA	-14	True	AATAAA	-19	NA	135615889	135368578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135586036_135586156_135587391_135587517_135615656
ES.1445.29	chr1	-	6724	30	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-19	-1994	combination_of_known_splicesites	FALSE	canonical	2	5	junction_27	17.5028450209895	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTATTTCTATTTT	NA	False	NA	-15	True	AATAAA	-18	NA	135615862	135368579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135530282_135530387_135534899_135535643_135615656
ES.1445.3	chr1	-	10393	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-39	854	combination_of_known_junctions	TRUE	canonical	3	17	junction_28	16.8865495455867	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCGTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135615882	135365731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.30	chr1	-	7601	32	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-71	-1994	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	20.5943426962992	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTATTTCTATTTT	NA	False	NA	-15	True	AATAAA	-18	NA	135615914	135368579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.31	chr1	-	7177	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-236	-2559	combination_of_known_junctions	FALSE	canonical	3	17	junction_28	16.8865495455867	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTTGTTTCACCTAC	NA	False	NA	15	True	NA	NA	NA	135616079	135369144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.32	chr1	-	5010	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-140	-2574	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	17.2810184885035	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTCTTTTCTTCAAG	3158	False	NA	0	True	NA	NA	NA	135438329	135369159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
ES.1445.33	chr1	-	5294	29	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	621	-2575	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	19.7111798795734	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGTCTTTTCTTCAA	NA	False	NA	-1	True	NA	NA	NA	135512472	135369160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292
ES.1445.35	chr1	-	6908	31	NNC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	1597	-2576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	18.9326584386756	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGGTCTTTTCTTCA	NA	False	NA	-2	True	NA	NA	NA	135614246	135369161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135614075
ES.1445.36	chr1	-	6155	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-4	-2576	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	23.174818709587	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGGTCTTTTCTTCA	NA	False	NA	-2	True	NA	NA	NA	135615847	135369161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386389_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135530282_135530387_135534899_135535643_135615656
ES.1445.37	chr1	-	6803	30	NNC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-48345	-2578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.9540009205374	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATTCTGGTCTTTTCTT	2766	False	NA	-4	True	NA	NA	NA	135561788	135369163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135561667
ES.1445.38	chr1	-	6877	31	NNC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-48370	-2582	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_30	18.216262575573	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGATTCTGGTCTTT	2741	False	NA	-8	True	NA	NA	NA	135561813	135369167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135561667
ES.1445.39	chr1	-	6150	30	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-29	-2582	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	20.1660762222635	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGATTCTGGTCTTT	NA	False	NA	-8	True	NA	NA	NA	135615872	135369167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386389_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135530282_135530387_135534899_135535643_135615656
ES.1445.4	chr1	-	8625	28	NIC	ENSMUSG00000009418.17	novel	12767	30	NA	NA	-16946	849	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.951037460433	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTGTGCCGTGTG	NA	False	NA	NA	False	NA	NA	NA	135530389	135365736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386389_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135530282
ES.1445.44	chr1	-	155	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	135410606	135410451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135410500_135410600
ES.1445.45	chr1	-	7421	2	Genic_Genomic	ENSMUSG00000104524.2	novel	2251	1	NA	NA	-7195	-1797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGATAAA	NA	False	NA	NA	False	NA	NA	NA	135460271	135452622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135454238_135454465
ES.1445.46	chr1	-	1727	2	Genic_Genomic	ENSMUSG00000104524.2	novel	2251	1	NA	NA	-1503	-1797	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGATAAA	NA	False	NA	NA	False	NA	NA	NA	135454579	135452622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_135454238_135454467
ES.1445.47	chr1	-	178	1	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	135454420	135454242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135454200_135454400
ES.1445.48	chr1	-	7952	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9908	False	NA	NA	False	NA	NA	NA	135575465	135567513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135567500_135575500
ES.1445.49	chr1	-	6507	2	NNC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-59	-47562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACGAGTTTCGAGAGTT	NA	False	NA	NA	False	NA	NA	NA	135615902	135581746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_135588008_135615656
ES.1445.5	chr1	-	7724	23	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-4773	848	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	18.4155992984388	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCATTTTGTGCCGTGT	NA	False	NA	NA	False	NA	NA	NA	135400184	135365737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896
ES.1445.50	chr1	-	192	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATCCCACAAATAA	NA	False	NA	NA	False	NA	NA	NA	135611112	135610920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135610900_135611100
ES.1445.51	chr1	-	180	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGACAGTATAAT	NA	False	NA	NA	False	NA	NA	NA	135611646	135611466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135611500_135611600
ES.1445.6	chr1	-	10246	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-233	513	combination_of_known_junctions	FALSE	canonical	3	17	junction_28	16.8865495455867	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGCATTTTTCTGTC	NA	False	NA	1	True	AATAAA	-36	NA	135616076	135366072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ES.1445.9	chr1	-	7941	27	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	-33	507	combination_of_known_junctions	FALSE	canonical	2	3	junction_26	22.0013447679371	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATGTCTGTGCATTTT	3332	False	NA	-5	True	AATAAA	-30	NA	135438155	135366078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
ES.14450.1	chr17	-	908	1	Intergenic	novelGene_12138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGCCCTTACTGTAA	NA	False	NA	NA	False	NA	NA	NA	22587611	22586703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22586700_22587600
ES.14451.1	chr17	+	972	7	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-15	-1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.6690073982936	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643187	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670075_22670134_22672432_22672560_22673404
ES.14451.10	chr17	+	815	6	ISM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	-37	2993	0	-2142	5prime_fragment	FALSE	canonical	3	27	junction_4	20.1930681175496	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTTTTTCATTGTGA	NA	False	NA	NA	False	NA	NA	NA	22643202	22672677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432
ES.14451.11	chr17	+	2698	5	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.0347054934545	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22643202	22675664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663269_22672534_22672560_22673404
ES.14451.12	chr17	+	3328	6	NNC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	1	-1157	intron_retention	FALSE	canonical	0	0	junction_1	34.226305672684	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643203	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643262_22647461_22647547_22663148_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.13	chr17	+	1095	9	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	4	-1164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.3990152868534	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTGTTTAAGTGTGTG	NA	False	NA	NA	False	TATAAA	-7	NA	22643206	22673655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22664304_22664371_22665777_22665875_22670075_22670134_22670667_22670751_22672432_22672560_22673404
ES.14451.14	chr17	+	970	7	FSM	ENSMUSG00000071266.14	ENSMUST00000088763.13	2935	7	-40	2005	6	-1154	multi-exon	FALSE	canonical	3	18	junction_4	23.5849528301415	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTGTTCTATCATT	NA	False	NA	NA	False	TATAAA	-17	NA	22643208	22673665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.15	chr17	+	3041	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.6798771271038	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGGTTGTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	22643213	22675668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22666925_22667015_22670075_22670134_22672432_22672560_22673404
ES.14451.16	chr17	+	838	6	NIC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	11	-1157	combination_of_known_junctions	TRUE	canonical	2	4	junction_2	34.63755187654	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643213	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_22643411_22647461_22647547_22665777_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.17	chr17	+	3074	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	39.7492138287036	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22643222	22675664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22664304_22664371_22665777_22665875_22666931_22667015_22672388_22672560_22673404
ES.14451.18	chr17	+	3151	8	NNC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	36.1916666470871	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTGTTTTAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	22643222	22675671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22664181_22664371_22665777_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.19	chr17	+	2925	7	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.6690073982936	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGACTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	22643236	22675664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670075_22670134_22672432_22672560_22673404
ES.14451.2	chr17	+	3476	6	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-14	-1157	intron_retention	FALSE	non_canonical	0	0	junction_3	32.2924139698475	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643188	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22665875_22670075_22670134_22672432_22672560_22673404
ES.14451.20	chr17	+	3007	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.4574588632197	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTAGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	22643236	22675663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670075_22670134_22670667_22670751_22672432_22672560_22673404
ES.14451.22	chr17	+	3498	7	NNC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	0	-1164	intron_retention	FALSE	non_canonical	0	0	junction_4	37.4551583749006	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTGTTTAAGTGTGTG	NA	False	NA	NA	False	TATAAA	-7	NA	22643248	22673655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22665875_22666925_22667015_22670075_22670134_22672432_22672560_22673404
ES.14451.23	chr17	+	3156	6	NNC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	43	-1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.5458615988185	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643291	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22663148_22665646_22665777_22665875_22670075_22670134_22672432_22672560_22673404
ES.14451.24	chr17	+	5211	5	NIC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	4258	-4	intron_retention	FALSE	canonical	3	27	junction_2	22.642603648874	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTTGGTTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	22647506	22675666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_22647547_22663148_22665875_22670077_22670134_22672432_22672560_22673404
ES.14451.25	chr17	+	2957	4	ISM	ENSMUSG00000071266.14	ENSMUST00000088763.13	2935	7	22135	1	-4720	-1	3prime_fragment	FALSE	canonical	3	18	junction_1	28.9865869364129	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGTTGTTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	22665383	22675669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.26	chr17	+	6249	3	NNC	ENSMUSG00000071266.14	novel	1572	3	NA	NA	-3831	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGTTGTTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	22666272	22675669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22670134_22672432_22672556_22673404
ES.14451.3	chr17	+	2880	6	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	32.2924139698475	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGGTTGTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	22643188	22675668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22670075_22670134_22672432_22672560_22673404
ES.14451.5	chr17	+	3478	6	NIC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	0	-1157	intron_retention	FALSE	canonical	3	18	junction_3	25.3187677425265	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643202	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_22643411_22647461_22647547_22663148_22665875_22670059_22670134_22672432_22672560_22673404
ES.14451.6	chr17	+	3025	6	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.5981594572454	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGTTGTTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	22643202	22675669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22663148_22663273_22665777_22665875_22670077_22670134_22672284_22672560_22673404
ES.14451.7	chr17	+	1023	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	0	-1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	37.7012964644724	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTGTGTGTTCTATC	NA	False	NA	NA	False	TATAAA	-14	NA	22643202	22673662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22664304_22664371_22665777_22665875_22670075_22670134_22672432_22672560_22673404
ES.14451.8	chr17	+	1025	8	NNC	ENSMUSG00000071266.14	novel	2926	7	NA	NA	0	-1153	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	32.3803921520164	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTGTTCTATCATTA	NA	False	NA	NA	False	TATAAA	-18	NA	22643202	22673666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22670684_22670751_22672432_22672560_22673404
ES.14451.9	chr17	+	3331	10	NNC	ENSMUSG00000071266.14	novel	2935	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	38.6522961801754	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGTTGTTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	22643202	22675669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22643411_22647461_22647547_22663148_22663273_22665528_22665646_22665777_22665875_22666925_22667015_22667999_22668098_22670012_22670134_22672432_22672560_22673404
ES.14452.1	chr17	-	2515	1	Intergenic	novelGene_12142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTCCTCAGTACAAAAG	NA	False	NA	NA	False	AATAGA	-34	NA	22650741	22648226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22648200_22650700
ES.14453.1	chr17	+	126	1	Intergenic	novelGene_12143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	22699350	22699476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22699400_22699500
ES.14454.1	chr17	+	3396	1	Intergenic	novelGene_12144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTATTTAAGTTTTA	2399	False	NA	NA	False	NA	NA	NA	22737241	22740637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22737200_22740600
ES.14455.1	chr17	-	4089	2	Intergenic	novelGene_12145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTTTGTTGCGT	9290	False	NA	NA	False	NA	NA	NA	22854872	22850735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22853974_22854021
ES.14456.1	chr17	+	3194	7	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13612	1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.0905365064094	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTTAGTGGAACT	NA	False	NA	10	True	NA	NA	NA	22893088	22910478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893201_22893380_22893506_22904318_22904429_22905311_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.10	chr17	+	3075	7	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13278	1036	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	11.5433963806152	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAGTTTTTAGTGGAAC	NA	False	NA	9	True	NA	NA	NA	22893422	22910477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22898251_22898321_22903156_22903216_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.11	chr17	+	3105	7	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13262	1039	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.82626864865578	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTAGTGGAACTAT	NA	False	NA	12	True	NA	NA	NA	22893438	22910480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22897760_22897863_22898251_22898321_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.12	chr17	+	5635	4	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-4795	419	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	1.4142135623731	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTACTGGACTACCT	NA	False	NA	NA	False	NA	NA	NA	22901905	22909860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.13	chr17	+	6481	3	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-3932	1039	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTAGTGGAACTAT	NA	False	NA	12	True	NA	NA	NA	22902768	22910480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22906513_22906703_22906831_22907870
ES.14456.2	chr17	+	3367	6	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13596	1028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3207773584679	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACTGCATCAGTTTTT	NA	False	NA	1	True	NA	NA	NA	22893104	22910469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22904318_22904429_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.3	chr17	+	3057	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13392	1032	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCATCAGTTTTTAGTG	NA	False	NA	5	True	NA	NA	NA	22893308	22910473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.4	chr17	+	2332	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13391	308	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCTGAATCCTATTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	22893309	22909749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.6	chr17	+	3220	8	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13352	1028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.3010745380378	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACTGCATCAGTTTTT	NA	False	NA	1	True	NA	NA	NA	22893348	22910469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22897760_22897858_22898251_22898321_22903156_22903216_22905311_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.7	chr17	+	2992	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13347	1030	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.17537465175128	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGCATCAGTTTTTAG	NA	False	NA	3	True	NA	NA	NA	22893353	22910471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22905311_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.8	chr17	+	3124	6	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13311	1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.0815161417561	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTTAGTGGAACT	NA	False	NA	10	True	NA	NA	NA	22893389	22910478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22897719_22897863_22905293_22905368_22906456_22906513_22906703_22906831_22907870
ES.14456.9	chr17	+	2942	4	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13298	1039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.1434160364686	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTAGTGGAACTAT	NA	False	NA	12	True	NA	NA	NA	22893402	22910480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_22893506_22897760_22897863_22906703_22906831_22907870
ES.14457.1	chr17	-	1314	1	Intergenic	novelGene_12146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGTCTGAGGTATCAT	NA	False	NA	NA	False	NA	NA	NA	22917642	22916328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22916300_22917600
ES.14458.1	chr17	+	836	1	Antisense	novelGene_ENSMUSG00000117183.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTCTTTTATGTTTC	NA	False	NA	NA	False	AGTAAA	-17	NA	22934289	22935125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_22934300_22935100
ES.14459.1	chr17	-	6104	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-23016	3358	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_3	5.43650214343336	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTACTGAATATTAT	NA	False	NA	0	True	NA	NA	NA	22958934	22929404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958635
ES.14459.10	chr17	-	6155	5	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22987	3347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.2869660770314	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGAGTTTGCTTA	NA	False	NA	-11	True	NA	NA	NA	22958905	22929415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22957475_22957567_22958635
ES.14459.11	chr17	-	4096	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22977	1169	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	39.1606378338703	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCTGTATTTCAGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	22958895	22931593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958415
ES.14459.12	chr17	-	3875	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22979	1166	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_3	5.43650214343336	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTGTCTGTATTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	22958897	22931596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958635
ES.14459.13	chr17	-	939	5	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22953	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9609162842106	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTATTTGTGTCTGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	22958871	22931600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22931858_22934763_22935000_22935788_22935916_22937255_22937339_22958635
ES.14459.14	chr17	-	3080	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22978	372	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_3	5.43650214343336	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTTATGGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	22958896	22932390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958635
ES.14459.15	chr17	-	2753	1	Intergenic	novelGene_12147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAATTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	22958897	22956144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22956100_22958900
ES.14459.2	chr17	-	5782	3	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-21651	3357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCTTACTGAATATTA	NA	False	NA	-1	True	NA	NA	NA	22957569	22929405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935883_22957475
ES.14459.3	chr17	-	3131	5	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22909	3349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9609162842106	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22958827	22929413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22932053_22934909_22935000_22935788_22935916_22937255_22937339_22958635
ES.14459.4	chr17	-	6277	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22978	3349	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	39.1606378338703	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22958896	22929413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958415
ES.14459.5	chr17	-	9146	2	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-3430	3349	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_1	0	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22939348	22929413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788
ES.14459.6	chr17	-	6041	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-22932	3349	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	40.1026460750687	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22958850	22929413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958605
ES.14459.9	chr17	-	5876	4	NNC	ENSMUSG00000117183.2	novel	2370	2	NA	NA	-23091	3347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.5736641458745	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGAGTTTGCTTA	NA	False	NA	-11	True	NA	NA	NA	22959009	22929415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22935000_22935788_22935916_22937255_22937339_22958927
ES.1446.1	chr1	-	212	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGACCGGATGCAAATA	5756	False	NA	NA	False	AAAAAG	-9	NA	135628289	135628077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135628100_135628300
ES.14460.1	chr17	+	4868	3	Intergenic	novelGene_12149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGACTTTCTCCTCTTT	NA	False	NA	NA	False	AATATA	-16	NA	22975898	22990367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_22975989_22982523_22982644_22985709
ES.14461.1	chr17	-	876	4	Intergenic	novelGene_12148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTTGCATAGTAA	NA	False	NA	NA	False	ATTAAA	-12	NA	23001336	22971609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_22971836_22998380_22998508_22998733_22998945_23001024
ES.14461.10	chr17	-	2842	8	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-9984	593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.77664385637157	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATGAAAAACTCAGAGAT	NA	False	NA	NA	False	AATAAA	-27	NA	23036694	22995597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998380_22998508_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.2	chr17	-	6964	8	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10086	4613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.77664385637157	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATTGATTGCCTTCTG	NA	False	NA	-4	True	NA	NA	NA	23036796	22991577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998380_22998508_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.3	chr17	-	3602	9	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10052	4613	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATTGATTGCCTTCTG	NA	False	NA	-4	True	NA	NA	NA	23036762	22991577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22991955_22995139_22997582_22998380_22998508_22998876_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.4	chr17	-	6732	9	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10037	4610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.94816885322237	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAATTGATTGCCTT	NA	False	NA	-7	True	NA	NA	NA	23036747	22991580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22994666_22994845_22997582_22998380_22998508_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.5	chr17	-	3698	9	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10011	4607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4.60977222864644	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACTGGAATTGATTGC	NA	False	NA	-10	True	NA	NA	NA	23036721	22991583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22991955_22995139_22997582_22998380_22998508_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.6	chr17	-	6813	8	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10084	4607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.24890659167824	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACTGGAATTGATTGC	NA	False	NA	-10	True	NA	NA	NA	23036794	22991583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998380_22998508_22998876_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.7	chr17	-	6806	7	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10001	4607	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	4.02768199119819	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACTGGAATTGATTGC	NA	False	NA	-10	True	NA	NA	NA	23036711	22991583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998380_22998508_22998733_22998945_23001024_23001092_23004787_23004923_23035266_23035358_23036534
ES.14461.8	chr17	-	3331	8	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10086	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.77664385637157	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCAAGCCTCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	23036796	22995210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998380_22998508_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14461.9	chr17	-	3171	7	NNC	ENSMUSG00000117333.2	novel	1533	2	NA	NA	-10053	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.59016994374947	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCAAGCCTCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	23036763	22995210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_22997582_22998733_22998945_23000305_23000363_23001024_23001102_23004787_23004923_23035266_23035358_23036534
ES.14462.1	chr17	+	4958	1	Antisense	novelGene_ENSMUSG00000059142.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACCAGCTTTTAGGAT	NA	False	NA	NA	False	NA	NA	NA	23078195	23083153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_23078200_23083200
ES.14463.1	chr17	-	3577	1	Genic_Genomic	ENSMUSG00000059142.17	novel	NA	NA	NA	NA	13122	1676	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTAGGATGGTATTGAG	NA	False	NA	NA	False	NA	NA	NA	23067571	23063994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_23064000_23067600
ES.14463.10	chr17	-	7258	1	NIC	ENSMUSG00000059142.17	novel	6618	6	NA	NA	5424	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCACATTGGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	23075269	23068011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23068000_23075300
ES.14463.11	chr17	-	5558	3	FSM	ENSMUSG00000059142.17	ENSMUST00000095615.3	4078	3	-1754	274	-1754	-274	multi-exon	FALSE	canonical	3	20	junction_1	0.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATAGTTCTTATCATT	NA	False	NA	NA	False	NA	NA	NA	23082447	23068277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479
ES.14463.12	chr17	-	3880	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-23	1826	6	-278	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGATGATAGTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	23086102	23068281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.13	chr17	-	3796	4	NIC	ENSMUSG00000059142.17	novel	5683	5	NA	NA	4	-279	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	14.290634073484	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGATGATAGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	23086075	23068282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23071741_23076223_23076351_23084220_23084311_23085954
ES.14463.15	chr17	-	3687	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-29	2025	0	-477	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTACTCTAATTTTC	NA	False	NA	NA	False	TTTAAA	-27	NA	23086108	23068480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.16	chr17	-	3100	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-29	2612	0	-1064	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTTTTTACTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	23086108	23069067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.17	chr17	-	4300	5	NNC	ENSMUSG00000059142.17	novel	5683	5	NA	NA	24	-3621	intron_retention	FALSE	canonical	0	0	junction_1	15.335824073065	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTCATGAATCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	23086055	23071624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23071741_23072516_23072642_23076223_23076351_23080479_23084311_23085954
ES.14463.18	chr17	-	4421	3	NIC	ENSMUSG00000059142.17	novel	5683	5	NA	NA	2	4819	intron_retention	FALSE	canonical	3	21	junction_1	8	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGTTTTAAGTTTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	23086077	23075883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23076351_23080479_23084311_23085954
ES.14463.19	chr17	-	2722	2	FSM	ENSMUSG00000059142.17	ENSMUST00000127557.2	3762	2	-41	1081	-41	-1081	multi-exon	FALSE	canonical	3	37	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGACAGCTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	23086149	23081783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23084311_23085954
ES.14463.2	chr17	-	7616	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-29	-1904	0	1119	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGTGGATTTGTAAGA	NA	False	NA	NA	False	AATAAA	-27	NA	23086108	23064551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.20	chr17	-	3206	1	NIC	ENSMUSG00000059142.17	novel	6618	6	NA	NA	1077	-1094	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGGCT	NA	False	NA	NA	False	NA	NA	NA	23085002	23081796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23081800_23085000
ES.14463.3	chr17	-	6464	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	4	-785	4	0	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTATGTTGTGCTTGC	NA	False	NA	NA	False	NA	NA	NA	23086075	23065670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.4	chr17	-	5715	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-30	-2	-1	2	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCCTGTTTGATGATT	NA	False	NA	NA	False	CATAAA	-37	NA	23086109	23066453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.6	chr17	-	4916	6	NNC	ENSMUSG00000059142.17	novel	6618	6	NA	NA	13	-687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.7783625615289	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTCATTGCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	23086066	23067142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23071641_23076311_23076351_23080479_23080536_23080705_23080827_23084220_23084311_23085954
ES.14463.7	chr17	-	4936	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	24	723	24	-723	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTGTCCCAGGTGTGC	NA	False	NA	NA	False	AATATA	-14	NA	23086055	23067178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14463.8	chr17	-	5110	6	FSM	ENSMUSG00000059142.17	ENSMUST00000160457.10	6618	6	0	1508	0	-723	multi-exon	FALSE	canonical	1	1	junction_3	13.6528385327008	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTGTCCCAGGTGTGC	NA	False	NA	NA	False	AATATA	-14	NA	23086108	23067178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23080705_23080827_23084220_23084311_23085954
ES.14463.9	chr17	-	4319	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	-186	1550	-157	-2	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTGGTCCTTTGGGCA	NA	False	NA	NA	False	AATAAA	-24	NA	23086265	23068005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ES.14464.1	chr17	+	3229	1	Intergenic	novelGene_12150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTGGTATATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	23087064	23090293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23087100_23090300
ES.14465.1	chr17	+	506	1	Intergenic	novelGene_12151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATCAACAGCTCTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	23094674	23095180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23094700_23095200
ES.14466.1	chr17	+	157	1	Intergenic	novelGene_12152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	23225362	23225519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23225400_23225500
ES.14467.1	chr17	-	4216	6	FSM	ENSMUSG00000002617.15	ENSMUST00000135840.2	759	6	-41	-3416	-40	0	multi-exon	FALSE	canonical	1	1	junction_4	4.4988887516808	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTAAGTCCTTCC	NA	False	NA	NA	False	AATAAA	-42	NA	23412266	23392842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410483_23410650_23410777_23412048
ES.14467.2	chr17	-	4099	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	4	0	3	0	multi-exon	FALSE	canonical	3	8	junction_3	2.41660919471891	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTAAGTCCTTCC	NA	False	NA	NA	False	AATAAA	-42	NA	23412222	23392842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
ES.14467.3	chr17	-	3963	5	NIC	ENSMUSG00000002617.15	novel	4103	6	NA	NA	86	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	6.01560470775798	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTAAGTCCTTCC	NA	False	NA	NA	False	AATAAA	-42	NA	23412098	23392842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23396339_23397248_23397376_23410318_23410483_23410650_23410777_23412048
ES.14467.5	chr17	-	3441	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	4	658	3	349	multi-exon	FALSE	canonical	3	8	junction_3	2.41660919471891	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGGCAAGCATACTT	NA	False	NA	NA	False	NA	NA	NA	23412222	23393500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
ES.14467.6	chr17	-	3549	6	NNC	ENSMUSG00000002617.15	novel	4103	6	NA	NA	0	344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.69209978830308	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATTTCAGTGGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	23412226	23393505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23396339_23397248_23397376_23401121_23401243_23410318_23410483_23410650_23410777_23412048
ES.14468.1	chr17	+	1839	4	Antisense	novelGene_ENSMUSG00000071256.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	3.68178700572909	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCTTAAAATTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	23776406	23781558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_23776518_23777629_23777728_23778664_23778753_23780016
ES.14468.2	chr17	+	2046	5	Antisense	novelGene_ENSMUSG00000071256.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.24264068711928	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGCAGAGGTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	23776407	23781548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_23776518_23777629_23777728_23778664_23778753_23778904_23779123_23780016
ES.14468.3	chr17	+	1266	1	Intergenic	novelGene_12153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCTTTTTGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	23781331	23782597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23781300_23782600
ES.14469.1	chr17	-	2692	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	-8	2	-8	-2	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTCTTTAGCTG	6676	False	NA	NA	False	AATAAA	-18	NA	23783220	23775742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
ES.14469.2	chr17	-	2778	6	NNC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	109	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	16.80476123008	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTCTTTAGCTG	6793	False	NA	NA	False	AATAAA	-18	NA	23783103	23775742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782739
ES.14469.3	chr17	-	6114	3	NIC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	5	-3	intron_retention	FALSE	canonical	3	42	junction_1	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGTGACTCTTTAGCT	6689	False	NA	NA	False	AATAAA	-17	NA	23783207	23775743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23777287_23778356_23778679_23778958
ES.14469.4	chr17	-	3698	5	NIC	ENSMUSG00000071256.5	novel	2686	6	NA	NA	28	-3	intron_retention	FALSE	canonical	3	39	junction_2	5.44862367942584	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGTGACTCTTTAGCT	6712	False	NA	NA	False	AATAAA	-17	NA	23783184	23775743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23780635_23782942
ES.1447.1	chr1	-	183	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTATATTTTGTAT	1686	False	NA	NA	False	NA	NA	NA	135632359	135632176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135632200_135632400
ES.14470.1	chr17	+	243	1	Intergenic	novelGene_12155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23801342	23801585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23801300_23801600
ES.14471.1	chr17	+	222	1	Intergenic	novelGene_12156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTTAAAAAAAAAAAA	10	False	NA	NA	False	NA	NA	NA	23808076	23808298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23808100_23808300
ES.14472.1	chr17	+	200	1	Intergenic	novelGene_12157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTTTTTAAAAA	1505	False	NA	NA	False	NA	NA	NA	23809646	23809846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23809600_23809800
ES.14473.1	chr17	+	2614	1	Intergenic	novelGene_12158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTCACTGGATAAAGG	2986	False	NA	NA	False	NA	NA	NA	23811127	23813741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23811100_23813700
ES.14473.2	chr17	+	2375	2	Antisense	novelGene_ENSMUSG00000062012.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTCACTGGATAAAGG	2986	False	NA	NA	False	NA	NA	NA	23811127	23813741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_23813132_23813370
ES.14473.3	chr17	+	158	1	Intergenic	novelGene_12159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	630	False	NA	NA	False	NA	NA	NA	23813141	23813299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23813100_23813300
ES.14474.1	chr17	+	177	1	Intergenic	novelGene_12161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAGAAGAAGAAGAAG	23	False	NA	NA	False	NA	NA	NA	23816433	23816610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23816400_23816600
ES.14475.1	chr17	-	3203	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-4	-1095	-4	1095	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTATTTAGCTGGGT	4819	False	NA	NA	False	ATTAAA	-33	NA	23805210	23793722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.10	chr17	-	2172	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	193	338	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.6579102609	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACAAAATTAA	5072	False	NA	NA	False	NA	NA	NA	23804957	23794479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
ES.14475.12	chr17	-	2145	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-41	0	-41	0	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	10008	False	NA	0	True	ATTAAA	-21	NA	23805247	23794817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.14	chr17	-	4951	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	35.2556378470168	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGGCTCTGTGTGCTT	4869	False	NA	-1	True	ATTAAA	-20	NA	23805160	23794818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23795446_23795551_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.15	chr17	-	2162	6	NNC	ENSMUSG00000062012.15	novel	2139	6	NA	NA	220	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.8597411507263	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGGCTCTGTGTGCTT	5099	False	NA	-1	True	ATTAAA	-20	NA	23804930	23794818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804629
ES.14475.16	chr17	-	5300	4	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	83	junction_2	4.92160768674447	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGGCTCTGTGTGCTT	4820	False	NA	-1	True	ATTAAA	-20	NA	23805209	23794818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23799207_23799744_23800245_23804411_23804549_23804934
ES.14475.17	chr17	-	1904	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	190	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	33.466401061363	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	5069	False	NA	-2	True	ATTAAA	-19	NA	23804960	23794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804886
ES.14475.18	chr17	-	5104	5	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	81	junction_2	5.58457697592217	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4821	False	NA	-2	True	ATTAAA	-19	NA	23805208	23794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.19	chr17	-	2838	4	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	79	junction_1	4.54606056566195	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGCTCTGTGTGCT	4819	False	NA	-2	True	ATTAAA	-19	NA	23805210	23794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23796086_23799085_23800245_23804411_23804549_23804934
ES.14475.2	chr17	-	2926	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	196	1095	combination_of_known_junctions	TRUE	canonical	3	19	junction_3	27.6579102609	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTATTTAGCTGGGT	5075	False	NA	NA	False	ATTAAA	-33	NA	23804954	23793722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
ES.14475.20	chr17	-	2003	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	391	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	39.2276121571981	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTTGGCTCTGTGTGC	NA	False	NA	-3	True	ATTAAA	-18	NA	23818070	23794820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23803793_23803913_23804411_23804549_23818015
ES.14475.21	chr17	-	1913	6	NNC	ENSMUSG00000062012.15	novel	2139	6	NA	NA	391	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	36.7390800102561	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCCTTGGCTCTGTGTG	NA	False	NA	-4	True	ATTAAA	-17	NA	23818070	23794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23818015
ES.14475.22	chr17	-	2159	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	26.5736711803243	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCCCTTGGCTCTGTG	4813	False	NA	-6	True	ATTAAA	-15	NA	23805216	23794823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.23	chr17	-	1853	6	NIC	ENSMUSG00000062012.15	novel	2139	6	NA	NA	166	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	27.6579102609	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGCCCTTGGCTCTG	5045	False	NA	-8	True	ATTAAA	-13	NA	23804984	23794825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23804934
ES.14475.24	chr17	-	1873	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	196	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.1083071146804	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTCAAGCTGTGCCCTT	5075	False	NA	-15	True	ATTAAA	-6	NA	23804954	23794832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796086_23799085_23799243_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.25	chr17	-	2250	5	ISM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	-3	2857	-3	1495	5prime_fragment	FALSE	canonical	3	81	junction_2	5.58457697592217	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGGTTTTTG	4820	False	NA	NA	False	NA	NA	NA	23805209	23797674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.26	chr17	-	177	1	Intergenic	novelGene_12154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGATCTTGGCC	8886	False	NA	NA	False	NA	NA	NA	23801143	23800966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23801000_23801100
ES.14475.27	chr17	-	491	3	FSM	ENSMUSG00000062012.15	ENSMUST00000228298.2	502	3	57	-46	57	46	multi-exon	FALSE	canonical	3	12	junction_1	39	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTTTTATGGTGTAGA	4936	False	NA	NA	False	AATAAA	-20	NA	23805093	23803717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23803913_23804411_23804549_23804934
ES.14475.28	chr17	-	1925	1	Intergenic	novelGene_12160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGACTCAAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	23816246	23814321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23814300_23816200
ES.14475.3	chr17	-	2090	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-4	1086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.5562541026421	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAAAGATGTTTTATT	4834	False	NA	NA	False	ATTAAA	-24	NA	23805195	23793731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23794169_23795212_23796086_23799085_23799207_23799744_23799837_23800030_23800200_23804411_23804549_23804934
ES.14475.4	chr17	-	2524	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	122	-542	66	542	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGCATAGCCCTGGC	4945	False	NA	NA	False	NA	NA	NA	23805084	23794275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.5	chr17	-	2498	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	11	-405	-4	405	multi-exon	FALSE	canonical	3	79	junction_1	5.98665181883831	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCTAAACGCGTGTATG	4834	False	NA	NA	False	NA	NA	NA	23805195	23794412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14475.6	chr17	-	2452	6	NIC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-3	390	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	28.7012194862866	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTTGTTGTTGGTAT	4820	False	NA	NA	False	NA	NA	NA	23805209	23794427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800200_23804411_23804549_23804934
ES.14475.7	chr17	-	2404	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	383	390	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	39.2276121571981	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTTGTTGTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	23818078	23794427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23803793_23803913_23804411_23804549_23818015
ES.14475.8	chr17	-	2276	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	391	389	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	32.2837420383697	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGGTTGTTGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	23818070	23794428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23818015
ES.14475.9	chr17	-	2527	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	-34	338	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	26.5736711803243	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACAAAATTAA	4789	False	NA	NA	False	NA	NA	NA	23805240	23794479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ES.14476.1	chr17	+	3979	7	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	-1424	1	intron_retention	FALSE	canonical	0	0	junction_1	94.7606634280983	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATTTTTTTACTTTTT	1995	False	NA	36	True	AGTAAA	-20	NA	23818405	23829994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819708_23819858_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.10	chr17	+	2320	3	NNC	ENSMUSG00000023902.19	novel	2368	4	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_1	1.5	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	861	False	NA	28	True	AGTAAA	-12	NA	23819811	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824486_23824939_23828240
ES.14476.11	chr17	+	2548	7	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	94.7606634280983	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTAGTCCTGATTTT	887	False	NA	26	True	AGTAAA	-10	NA	23819837	23829984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828580
ES.14476.12	chr17	+	2350	4	FSM	ENSMUSG00000023902.19	ENSMUST00000115509.8	2368	4	18	0	12	0	multi-exon	FALSE	canonical	1	2	junction_2	114.030210422014	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	897	False	NA	28	True	AGTAAA	-12	NA	23819847	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23819934_23824478_23824939_23827081_23827140_23828240
ES.14476.13	chr17	+	3843	5	NIC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	12	-3	intron_retention	FALSE	canonical	3	153	junction_1	57.2035838038142	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTGATTTTTTTACT	897	False	NA	32	True	AGTAAA	-16	NA	23819847	23829990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23819934_23824478_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.14	chr17	+	2651	7	NNC	ENSMUSG00000023902.19	novel	909	5	NA	NA	601	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.141132261248	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	550	False	NA	28	True	AGTAAA	-12	NA	23820515	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23820669_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ES.14476.15	chr17	+	5037	3	ISM	ENSMUSG00000023902.19	ENSMUST00000133749.2	548	4	-3071	-1322	-1062	0	intron_retention	FALSE	canonical	3	281	junction_2	0.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	895	False	NA	35	True	AGTAAA	-19	NA	23823392	23829993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_23826619_23827081_23827140_23828240
ES.14476.16	chr17	+	3309	6	NNC	ENSMUSG00000023902.19	novel	1006	4	NA	NA	-845	0	intron_retention	FALSE	canonical	2	3	junction_1	101.983135860788	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	1112	False	NA	28	True	AGTAAA	-12	NA	23823609	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23824325_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.17	chr17	+	3122	7	NNC	ENSMUSG00000023902.19	novel	909	5	NA	NA	-754	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	106.394574840805	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	1203	False	NA	28	True	AGTAAA	-12	NA	23823700	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23824325_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ES.14476.18	chr17	+	2565	6	ISM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	4586	3	-39	-3	3prime_fragment	FALSE	canonical	3	46	junction_5	87.0618171186428	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTGATTTTTTTACT	1918	False	NA	32	True	AGTAAA	-16	NA	23824415	23829990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ES.14476.19	chr17	+	3900	4	FSM	ENSMUSG00000023902.19	ENSMUST00000133749.2	548	4	-2033	-1319	-24	-3	multi-exon	FALSE	canonical	3	46	junction_3	111.016515287892	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTGATTTTTTTACT	1933	False	NA	32	True	AGTAAA	-16	NA	23824430	23829990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23826619_23827081_23827140_23828240_23828441_23828536
ES.14476.2	chr17	+	2787	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	-83	-6	-83	-1	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGATTTTTTTACTTT	796	False	NA	34	True	AGTAAA	-18	NA	23819746	23829992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.3	chr17	+	4134	4	NIC	ENSMUSG00000023902.19	novel	1074	5	NA	NA	-80	-1	intron_retention	FALSE	canonical	3	153	junction_1	60.5768566001535	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGATTTTTTTACTTT	799	False	NA	34	True	AGTAAA	-18	NA	23819749	23829992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23819934_23824478_23826619_23827081_23827140_23828240
ES.14476.4	chr17	+	2686	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	-80	3	-80	-3	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTGATTTTTTTACT	799	False	NA	32	True	AGTAAA	-16	NA	23819749	23829990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ES.14476.5	chr17	+	2846	6	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	8	junction_1	100.210578283932	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	836	False	NA	35	True	AGTAAA	-19	NA	23819786	23829993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824380_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.6	chr17	+	2728	6	NNC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	-38	0	intron_retention	FALSE	canonical	0	0	junction_1	103.050667149708	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	841	False	NA	28	True	AGTAAA	-12	NA	23819791	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824486_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ES.14476.7	chr17	+	2475	5	NIC	ENSMUSG00000023902.19	novel	2698	6	NA	NA	-38	-3	intron_retention	FALSE	canonical	3	18	junction_2	109.005733794145	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCTGATTTTTTTACT	841	False	NA	32	True	AGTAAA	-16	NA	23819791	23829990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240
ES.14476.8	chr17	+	4654	3	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	-38	0	intron_retention	FALSE	canonical	3	8	junction_1	136.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	841	False	NA	35	True	AGTAAA	-19	NA	23819791	23829993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824380_23827140_23828240
ES.14476.9	chr17	+	2389	4	NNC	ENSMUSG00000023902.19	novel	2368	4	NA	NA	-29	0	intron_retention	FALSE	canonical	0	0	junction_1	131.995791178692	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	850	False	NA	28	True	AGTAAA	-12	NA	23819800	23829986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23819934_23824486_23824939_23827081_23827140_23828240
ES.14477.1	chr17	-	1827	1	Antisense	novelGene_ENSMUSG00000023902.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGGCTTTCTGAGGA	3476	False	NA	NA	False	NA	NA	NA	23825692	23823865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_23823900_23825700
ES.14478.1	chr17	-	1797	1	Antisense	novelGene_ENSMUSG00000023902.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTCTATCTCATAACC	NA	False	NA	NA	False	ATTAAA	-17	NA	23829551	23827754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_23827800_23829600
ES.14479.1	chr17	+	177	1	Intergenic	novelGene_12162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4613	False	NA	NA	False	NA	NA	NA	23833868	23834045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23833900_23834000
ES.1448.1	chr1	+	2853	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-1413	-5	-1413	5	multi-exon	FALSE	canonical	3	639	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGTGAAATTCTTTTA	5332	False	NA	27	True	AATGAA	-34	NA	135692443	135696879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135694633_135696215
ES.1448.2	chr1	+	1816	2	FSM	ENSMUSG00000041801.6	ENSMUST00000136445.2	569	2	-1036	-211	-21	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGTCTACTGAGTGAAA	6724	False	NA	19	True	AATGAA	-26	NA	135693835	135696871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135694996_135696215
ES.1448.3	chr1	+	3020	1	Genic_Genomic	ENSMUSG00000041801.6	novel	NA	NA	NA	NA	-5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGTCTACTGAGTGAAA	6740	False	NA	19	True	AATGAA	-26	NA	135693851	135696871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_135693900_135696900
ES.1448.4	chr1	+	2260	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	0	-825	0	825	multi-exon	FALSE	canonical	3	639	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGATCCATTGATGTCT	6745	False	NA	NA	False	TATAAA	-25	NA	135693856	135697699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135694633_135696215
ES.1448.5	chr1	+	1399	2	NNC	ENSMUSG00000041801.6	novel	1435	2	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGTCTACTGAGTGAAA	6746	False	NA	19	True	AATGAA	-26	NA	135693857	135696871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135694633_135696247
ES.14480.1	chr17	-	1761	9	ISM	ENSMUSG00000023903.9	ENSMUST00000024696.9	4528	10	253	2683	-47	-1814	5prime_fragment	FALSE	canonical	0	0	junction_1	0.661437827766148	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAAATTGTGATCCCT	NA	False	NA	NA	False	NA	NA	NA	23863998	23849967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_23850238_23850316_23850470_23850764_23850848_23851522_23851608_23851707_23851885_23858726_23859017_23859112_23859249_23863012_23863146_23863564
ES.14481.1	chr17	-	171	1	Intergenic	novelGene_12163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	23867306	23867135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23867100_23867300
ES.14482.1	chr17	-	176	1	Intergenic	novelGene_12164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAATAATAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	23868171	23867995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23868000_23868200
ES.14483.1	chr17	+	168	1	Intergenic	novelGene_12165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAGGTA	3462	False	NA	NA	False	NA	NA	NA	23871563	23871731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23871600_23871700
ES.14484.1	chr17	+	1931	9	ISM	ENSMUSG00000043782.10	ENSMUST00000232760.2	1990	10	378	4	378	-4	3prime_fragment	FALSE	canonical	0	0	junction_7	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCTAAAATTTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	23880700	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_23881037_23884361_23884578_23884714_23884832_23884915_23885063_23885722_23885921_23886033_23886184_23886522_23886654_23886862_23886984_23887076
ES.14485.1	chr17	+	942	3	NIC	ENSMUSG00000023904.11	novel	597	4	NA	NA	2	-2	intron_retention	FALSE	canonical	3	343	junction_1	29	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCTCAGCAGCCTTT	NA	False	NA	9	True	AATAAA	-17	NA	23892571	23894199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23893043_23893520_23893650_23893857
ES.14485.2	chr17	+	858	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTTCTCAGCAGCCT	NA	False	NA	7	True	AATAAA	-15	NA	23892575	23894197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
ES.14485.3	chr17	+	1150	4	NNC	ENSMUSG00000023904.11	novel	597	4	NA	NA	1	295	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGGTTGTTTCCGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	23892582	23894496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
ES.14485.4	chr17	+	656	4	FSM	ENSMUSG00000023904.11	ENSMUST00000179928.2	597	4	-9	-50	-9	-3	multi-exon	FALSE	canonical	2	24	junction_1	165.748805928328	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTCTCAGCAGCCTT	NA	False	NA	8	True	AATAAA	-16	NA	23892591	23894198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23892678_23892942_23893043_23893520_23893650_23893857
ES.14486.10	chr17	-	1956	10	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	160	junction_9	111.877688946235	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	773	False	NA	-21	True	AATAAA	-14	NA	23892837	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23889082_23889166_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.11	chr17	-	1750	10	NIC	ENSMUSG00000041319.15	novel	1673	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	423	junction_7	41.9597102462662	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	790	False	NA	-21	True	AATAAA	-14	NA	23892820	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23888924_23889009_23889082_23889166_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.12	chr17	-	1555	13	NNC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_12	137.408151141044	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	785	False	NA	-21	True	AATAAA	-14	NA	23892825	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23887861_23887949_23888085_23888169_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892740_23892781
ES.14486.13	chr17	-	1547	13	NNC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.363764941017	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	785	False	NA	-21	True	AATAAA	-14	NA	23892825	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23887895_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.14	chr17	-	1617	12	NIC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	423	junction_9	40.2184119671205	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	766	False	NA	-21	True	AATAAA	-14	NA	23892844	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.16	chr17	-	1347	12	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	165.460988885523	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	-21	True	AATAAA	-14	NA	23892840	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.17	chr17	-	1425	14	NNC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	132.959530257859	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	796	False	NA	-21	True	AATAAA	-14	NA	23892814	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892790
ES.14486.19	chr17	-	1597	12	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	160	junction_11	101.642868550985	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	776	False	NA	-21	True	AATAAA	-14	NA	23892834	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.2	chr17	-	1489	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	-20	-19	-20	15	multi-exon	TRUE	canonical	3	160	junction_13	93.5049281997111	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAATGGAGACCAATTA	734	False	NA	-2	True	AATAAA	-33	NA	23892876	23887572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.20	chr17	-	1521	13	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	160	junction_12	95.8817269116256	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	756	False	NA	-21	True	AATAAA	-14	NA	23892854	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.21	chr17	-	1518	13	NIC	ENSMUSG00000041319.15	novel	1431	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_12	120.887085745335	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	766	False	NA	-22	True	AATAAA	-13	NA	23892844	23887592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ES.14486.23	chr17	-	1919	9	NIC	ENSMUSG00000041319.15	novel	1431	14	NA	NA	101	0	intron_retention	FALSE	canonical	3	423	junction_6	44.1333207452147	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	895	False	NA	-22	True	AATAAA	-13	NA	23892715	23887592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23889082_23889166_23889216_23889296_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.25	chr17	-	1464	14	NNC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	153.392484945873	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	766	False	NA	-22	True	AATAAA	-13	NA	23892844	23887592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889362_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.26	chr17	-	1586	12	NIC	ENSMUSG00000041319.15	novel	1431	14	NA	NA	5	-1	intron_retention	FALSE	canonical	3	69	junction_11	124.681412189045	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTGCATTTTATTC	770	False	NA	-23	True	AATAAA	-12	NA	23892840	23887593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ES.14486.27	chr17	-	1601	12	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	160	junction_11	100.126366438608	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTTGCATTTTAT	760	False	NA	-25	True	AATAAA	-10	NA	23892850	23887595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.28	chr17	-	1268	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	16	166	5	13	multi-exon	FALSE	canonical	3	160	junction_13	93.5049281997111	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGAGTGATGCTTGTGT	770	False	NA	NA	False	NA	NA	NA	23892840	23887757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.3	chr17	-	1323	11	NIC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	143.026431123761	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	801	False	NA	-21	True	AATAAA	-14	NA	23892809	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.4	chr17	-	1448	14	NNC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	133.727533643741	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	776	False	NA	-21	True	AATAAA	-14	NA	23892834	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892734_23892807
ES.14486.7	chr17	-	1593	12	NIC	ENSMUSG00000041319.15	novel	1450	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	160	junction_11	100.140232253088	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	770	False	NA	-21	True	AATAAA	-14	NA	23892840	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888551_23888820_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ES.14486.8	chr17	-	1563	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	-59	0	-19	0	multi-exon	FALSE	canonical	3	423	junction_10	38.5186643070603	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	735	False	NA	-21	True	AATAAA	-14	NA	23892875	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ES.14486.9	chr17	-	1597	12	NIC	ENSMUSG00000041319.15	novel	1504	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	423	junction_9	38.5308720271622	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	785	False	NA	-21	True	AATAAA	-14	NA	23892825	23887591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23887861_23887949_23888085_23888169_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ES.14487.1	chr17	-	1006	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	-24	2	-24	-2	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGGCCTGATCCCTA	NA	False	NA	-3	True	AATAAA	-16	NA	23896466	23894420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
ES.14488.1	chr17	+	1496	3	FSM	ENSMUSG00000023906.4	ENSMUST00000024699.4	1622	3	122	4	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGATGTCTCT	NA	False	NA	5	True	AATAAA	-19	NA	23898344	23901416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23898382_23898731_23898796_23900021
ES.14488.2	chr17	+	1432	2	FSM	ENSMUSG00000023906.4	ENSMUST00000232719.2	1431	2	-1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGATGTCTCT	NA	False	NA	5	True	AATAAA	-19	NA	23898344	23901416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23898382_23900021
ES.14488.3	chr17	+	1539	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	19	-480	19	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGATGTCTCT	NA	False	NA	5	True	AATAAA	-19	NA	23898651	23901416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23898796_23900021
ES.14489.1	chr17	-	1447	1	FSM	ENSMUSG00000066720.8	ENSMUST00000085989.8	1443	1	-5	1	-5	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTCTGGTCTGTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	23903005	23901558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23901600_23903000
ES.1449.1	chr1	-	157	1	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAACATA	NA	False	NA	NA	False	NA	NA	NA	135711701	135711544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135711500_135711700
ES.14490.1	chr17	-	175	1	Intergenic	novelGene_12166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGATAAAATTTCATA	NA	False	NA	NA	False	NA	NA	NA	23912142	23911967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23912000_23912100
ES.14491.1	chr17	-	316	1	Intergenic	novelGene_12167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	23928519	23928203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23928200_23928500
ES.14491.2	chr17	-	175	1	Intergenic	novelGene_12168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGCAAGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	23928521	23928346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23928300_23928500
ES.14492.1	chr17	-	371	1	Intergenic	novelGene_12169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGTCTAGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	23934596	23934225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23934200_23934600
ES.14493.1	chr17	+	202	1	Intergenic	novelGene_12170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGTAGTGGTAAGCA	NA	False	NA	NA	False	NA	NA	NA	23936404	23936606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_23936400_23936600
ES.14494.1	chr17	+	1820	9	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-49	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	159.82158020743	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2889	False	NA	33	True	AAAAAG	-44	NA	23945260	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953162_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.10	chr17	+	1965	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_7	153.550231095195	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3005	False	NA	33	True	AAAAAG	-44	NA	23945376	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955364_23955468
ES.14494.11	chr17	+	2956	7	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	60	-1	intron_retention	FALSE	canonical	3	50	junction_6	165.631787072678	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3010	False	NA	31	True	AATAAA	-45	NA	23945381	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955364_23955468
ES.14494.12	chr17	+	3078	6	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	419	junction_2	47.0004255299886	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3028	False	NA	32	True	AAAAAG	-43	NA	23945399	23955707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23953291_23953939_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.13	chr17	+	4504	3	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-42	0	intron_retention	FALSE	canonical	3	50	junction_2	218.5	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCTCTTCTTGTCCCT	3029	False	NA	29	True	AATAAA	-43	NA	23945400	23955704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23955364_23955468
ES.14494.14	chr17	+	2145	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	162.817789731532	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3029	False	NA	31	True	AATAAA	-45	NA	23945400	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945810_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.15	chr17	+	1932	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.804672650273	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCTCTTCTTGTCCC	3036	False	NA	28	True	AATAAA	-42	NA	23945407	23955703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945607_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.16	chr17	+	1432	7	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	179.768060443327	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCTCTTCTTGTCCC	3037	False	NA	28	True	AATAAA	-42	NA	23945408	23955703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.17	chr17	+	2064	7	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-26	1	intron_retention	FALSE	canonical	3	384	junction_2	56.0081839258038	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3045	False	NA	33	True	AAAAAG	-44	NA	23945416	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.18	chr17	+	2625	7	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-26	1	intron_retention	FALSE	canonical	1	4	junction_3	219.644978696684	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3045	False	NA	33	True	AAAAAG	-44	NA	23945416	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23954098_23954173_23954347_23954536_23954695_23955297_23955364_23955468
ES.14494.19	chr17	+	2986	7	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-26	1	intron_retention	FALSE	canonical	1	4	junction_3	182.726951730961	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3045	False	NA	33	True	AAAAAG	-44	NA	23945416	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23953291_23953939_23954098_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.2	chr17	+	2071	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	-27	-4	-27	1	multi-exon	FALSE	canonical	3	384	junction_2	52.6761379583211	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2911	False	NA	33	True	AAAAAG	-44	NA	23945282	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.20	chr17	+	3696	5	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-26	1	intron_retention	FALSE	canonical	3	50	junction_4	201.861802974213	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTCTTCTTGTCCCTT	3045	False	NA	30	True	AATAAA	-44	NA	23945416	23955705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297_23955364_23955468
ES.14494.21	chr17	+	293	2	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCAGCATAGCTCTTC	3046	False	NA	21	True	AATAAA	-35	NA	23945417	23955696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945601_23955586
ES.14494.22	chr17	+	3900	4	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-25	1	intron_retention	FALSE	canonical	3	451	junction_3	45.3455865793158	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3046	False	NA	33	True	AAAAAG	-44	NA	23945417	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23954695_23955297_23955376_23955468
ES.14494.23	chr17	+	2825	6	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-23	1	intron_retention	FALSE	canonical	0	0	junction_2	201.551383026761	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3048	False	NA	33	True	AAAAAG	-44	NA	23945419	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23953291_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.24	chr17	+	2790	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-20	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	170.679315007498	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACCCAAGGTTGCTCA	3051	False	NA	2	True	AATAAA	-16	NA	23945422	23955677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23951906_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.25	chr17	+	3787	4	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	486	junction_2	34.6506373197762	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3063	False	NA	34	True	AAAAAG	-45	NA	23945434	23955709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297
ES.14494.26	chr17	+	1811	9	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	157.306825980311	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3064	False	NA	33	True	AAAAAG	-44	NA	23945435	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23952996_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.28	chr17	+	1189	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-6	1	at_least_one_novel_splicesite	TRUE	canonical	1	19	junction_1	190.763129111921	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3065	False	NA	33	True	AAAAAG	-44	NA	23945436	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951637_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.29	chr17	+	4576	2	ISM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	-5	-7	-5	1	intron_retention	FALSE	canonical	3	487	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3066	False	NA	33	True	AAAAAG	-44	NA	23945437	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_23945616_23951310
ES.14494.3	chr17	+	3805	5	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	451	junction_4	39.6925685739787	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2951	False	NA	33	True	AAAAAG	-44	NA	23945322	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.31	chr17	+	3483	4	NIC	ENSMUSG00000023908.9	novel	2064	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	384	junction_2	42.6796855137846	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3066	False	NA	31	True	AATAAA	-45	NA	23945437	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23951799_23952796_23955376_23955468
ES.14494.32	chr17	+	1755	7	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	163.909951565554	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3067	False	NA	31	True	AATAAA	-45	NA	23945438	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23955297_23955376_23955468
ES.14494.33	chr17	+	1582	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	161.490759197307	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCTCTTCTTGTCCC	3068	False	NA	28	True	AATAAA	-42	NA	23945439	23955703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951637_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.34	chr17	+	932	6	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	198.088868945229	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3068	False	NA	33	True	AAAAAG	-44	NA	23945439	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.35	chr17	+	1906	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	171.07260661688	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3068	False	NA	31	True	AATAAA	-45	NA	23945439	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23953291_23953945_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.36	chr17	+	3864	4	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	50	junction_3	225.190783312481	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3068	False	NA	31	True	AATAAA	-45	NA	23945439	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23954695_23955297_23955364_23955468
ES.14494.38	chr17	+	1822	9	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.13622130861	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTTCTTGTCCCTTT	3071	False	NA	31	True	AATAAA	-45	NA	23945442	23955706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23952976_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.39	chr17	+	3969	3	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	487	junction_1	36.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23954695_23955297
ES.14494.4	chr17	+	3669	6	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	10	1	intron_retention	FALSE	canonical	3	438	junction_2	42.4103760888771	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2960	False	NA	33	True	AAAAAG	-44	NA	23945331	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.40	chr17	+	3669	5	NNC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	7	1	intron_retention	FALSE	non_canonical	0	0	junction_1	219.627383310916	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3078	False	NA	33	True	AAAAAG	-44	NA	23945449	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945607_23951310_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.41	chr17	+	1689	7	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	-2291	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	178.649563858037	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	9038	False	NA	32	True	AAAAAG	-43	NA	23951409	23955707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23951799_23952796_23953291_23953939_23954098_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.5	chr17	+	1594	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2987	False	NA	33	True	AAAAAG	-44	NA	23945358	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.6	chr17	+	2762	6	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	46	1	intron_retention	FALSE	canonical	3	384	junction_2	57.1615255219803	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	2996	False	NA	33	True	AAAAAG	-44	NA	23945367	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23951799_23952796_23954347_23954536_23954695_23955297_23955376_23955468
ES.14494.7	chr17	+	1906	1	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	53	-6611	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAATAAAATAAAAT	3003	False	NA	NA	False	NA	NA	NA	23945374	23947280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945400_23947300
ES.14494.8	chr17	+	4545	3	NIC	ENSMUSG00000023908.9	novel	2064	7	NA	NA	53	0	intron_retention	FALSE	canonical	3	451	junction_2	18	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTCTTGTCCCTTTA	3003	False	NA	32	True	AAAAAG	-43	NA	23945374	23955707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_23945616_23951310_23955376_23955468
ES.14494.9	chr17	+	2976	7	FSM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	-67	-7	54	1	multi-exon	FALSE	canonical	3	419	junction_2	45.7484061653154	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTCCCTTTAT	3004	False	NA	33	True	AAAAAG	-44	NA	23945375	23955708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ES.14495.1	chr17	-	2579	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	32	junction_1	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCCTGACCACATTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	23959376	23955159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23956974_23957113_23957336_23958833
ES.14495.2	chr17	-	2506	3	NNC	ENSMUSG00000023909.5	novel	2575	3	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_1	19.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCGCCTGACCACATT	NA	False	NA	NA	False	AATAAA	-18	NA	23959343	23955162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23956937_23957113_23957336_23958833
ES.14495.3	chr17	-	1950	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	70	555	70	-555	multi-exon	FALSE	canonical	3	32	junction_1	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATGCTGCCACATGA	NA	False	NA	NA	False	AATAAA	-10	NA	23959302	23955714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23956974_23957113_23957336_23958833
ES.14496.1	chr17	+	4748	5	NNC	ENSMUSG00000097006.8	novel	1798	5	NA	NA	-573	-28	intron_retention	FALSE	canonical	0	0	junction_2	1.22474487139159	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAACAAAAC	8339	False	NA	NA	False	NA	NA	NA	23961634	23973011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_23961733_23962201_23962396_23965272_23965381_23968573_23968685_23968774
ES.14496.2	chr17	+	4778	2	ISM	ENSMUSG00000097006.8	ENSMUST00000180547.2	1709	3	-119	-2860	-18	2	intron_retention	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACGGTCTCTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	23968191	23973041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_23968502_23968573
ES.14497.1	chr17	+	3498	1	Genic_Genomic	ENSMUSG00000115692.2	novel	NA	NA	NA	NA	-1860	-220	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	23982374	23985872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_23982400_23985900
ES.14498.1	chr17	-	1466	2	NIC	ENSMUSG00000040680.10	novel	2123	10	NA	NA	3089	-1	intron_retention	FALSE	canonical	3	11	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTAGCAAGTTCTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	23961718	23960171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23961250_23961330
ES.14498.3	chr17	-	2334	11	NNC	ENSMUSG00000040680.10	novel	2123	10	NA	NA	-683	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	4.85386443980464	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCTTTAGCAAGTTCTT	9719	False	NA	NA	False	AATAAA	-15	NA	23965490	23960173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23960946_23961170_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908_23964078_23964712_23964793_23965261
ES.14499.1	chr17	-	3823	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-25	518	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	24.7831410768016	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACCTGAGTCAGATTCC	7580	False	NA	NA	False	NA	NA	NA	23990521	23971248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
ES.14499.10	chr17	-	2576	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	-75	-58	5	52	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATGGAAAATTTGTTT	7530	False	NA	NA	False	CATAAA	-17	NA	23990571	23974335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
ES.14499.11	chr17	-	3682	5	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	159	0	intron_retention	FALSE	canonical	3	99	junction_3	17.6493625947228	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTTGTGTGTTTGA	NA	False	NA	NA	False	AATATA	-20	NA	23982590	23974393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23981569_23981949
ES.14499.13	chr17	-	2571	8	NIC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	-40	-10	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	46.0230643154016	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATGCAAATAATGTT	7565	False	NA	NA	False	AATATA	-10	NA	23990536	23974403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
ES.14499.14	chr17	-	273	1	Intergenic	novelGene_12171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATTTTTTTAAACTGA	NA	False	NA	NA	False	AATAAA	-16	NA	23986813	23986540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23986500_23986800
ES.14499.15	chr17	-	172	1	Intergenic	novelGene_12172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTGACT	NA	False	NA	NA	False	NA	NA	NA	23986813	23986641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23986600_23986800
ES.14499.2	chr17	-	3369	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	24.7831410768016	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCTGTGTGTCAGTAA	7514	False	NA	-1	True	AATAAA	-23	NA	23990587	23971768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
ES.14499.3	chr17	-	3660	10	NNC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.5758711028379	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGCTGTGTGTCAGTA	7584	False	NA	-2	True	AATAAA	-22	NA	23990517	23971769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23988850_23989115_23989208_23989307_23990388
ES.14499.5	chr17	-	4781	7	FSM	ENSMUSG00000040097.17	ENSMUST00000227120.2	2943	7	-1844	6	-1158	-6	multi-exon	FALSE	canonical	3	72	junction_1	23.685438564654	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTGCTGTGTGTCA	NA	False	NA	-5	True	AATAAA	-19	NA	23983907	23971772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949
ES.14499.6	chr17	-	4625	8	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-91	-6	intron_retention	FALSE	canonical	3	22	junction_7	37.8034659894609	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTGCTGTGTGTCA	7434	False	NA	-5	True	AATAAA	-19	NA	23990667	23971772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208
ES.14499.7	chr17	-	3462	9	NIC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	43.4667617266343	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGCTGCTGTGTGTC	7514	False	NA	-6	True	AATAAA	-18	NA	23990587	23971773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23989208_23989307_23990388
ES.14499.8	chr17	-	3499	9	NNC	ENSMUSG00000040097.17	novel	2943	7	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.8603895087571	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGCTGCTGTGTGTC	7557	False	NA	-6	True	AATAAA	-18	NA	23990544	23971773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23983742_23983921_23990388
ES.14499.9	chr17	-	2907	7	NNC	ENSMUSG00000040097.17	novel	2443	7	NA	NA	29	411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.4461683267352	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAATAATACA	7554	False	NA	NA	False	NA	NA	NA	23990547	23973976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981143_23981569_23981949_23982293_23990388
ES.145.1	chr1	-	2698	3	ISM	ENSMUSG00000043716.14	ENSMUST00000125005.2	784	4	-38	-1196	-20	0	intron_retention	FALSE	canonical	3	6432	junction_1	107	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174646	16171518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16172824_16172915_16173054_16173391
ES.145.16	chr1	-	1263	6	NIC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-2	2	intron_retention	FALSE	canonical	3	5452	junction_5	662.022839485165	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAATGTGTCGGAGT	NA	False	NA	-14	True	AATAAA	-16	NA	16174628	16171527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ES.145.17	chr1	-	845	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3167.28479931944	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAATGTGTCGGAGT	NA	False	NA	-14	True	AATAAA	-16	NA	16174627	16171527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16171566_16171966_16172161_16172713_16172824_16172915_16173048_16173401_16173559_16173733_16173909_16174588
ES.145.18	chr1	-	496	5	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2714.93299871286	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAATGTGTCGGAGT	NA	False	NA	-14	True	AATAAA	-16	NA	16174626	16171527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16173826_16173909_16174588
ES.145.19	chr1	-	879	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2534.85691027236	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174622	16171531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16171584_16171957_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ES.145.2	chr1	-	1479	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	-319	3	-319	-3	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCGGAGTCTTTGT	NA	False	NA	-8	True	AATAAA	-22	NA	16175205	16171521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ES.145.20	chr1	-	1806	5	NIC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	5452	junction_4	640.231793962156	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTGAAATGTGTCG	NA	False	NA	-18	True	AATAAA	-12	NA	16174622	16171531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ES.145.5	chr1	-	910	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2415.49321510581	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCGGAGTCTTTGT	NA	False	NA	-8	True	AATAAA	-22	NA	16174627	16171521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173568_16173733_16173909_16174588
ES.145.7	chr1	-	1097	7	NIC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2530.86944327219	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCGGAGTCTTTGT	NA	False	NA	-8	True	AATAAA	-22	NA	16174595	16171521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174360
ES.145.9	chr1	-	892	7	NNC	ENSMUSG00000043716.14	novel	1163	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2409.49375157706	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCGGAGTCTTTGT	NA	False	NA	-8	True	AATAAA	-22	NA	16174626	16171521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16171584_16171950_16172161_16172721_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ES.1450.1	chr1	+	1034	7	NNC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	-2539	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.6862925215263	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATGGTTTCTGTAGCCC	1032	False	NA	40	True	ATTAAA	-21	NA	135730255	135738724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135730362_135732787_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ES.1450.2	chr1	+	1057	6	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	5091	0	-133	0	3prime_fragment	FALSE	canonical	3	26	junction_1	26.8730348118704	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	3438	False	NA	43	True	ATTAAA	-24	NA	135732661	135738727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ES.1450.3	chr1	+	1255	5	ISM	ENSMUSG00000026418.17	ENSMUST00000148201.8	1150	9	5297	0	73	0	3prime_fragment	FALSE	canonical	3	46	junction_1	20.1912728672563	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	3644	False	NA	43	True	ATTAAA	-24	NA	135732867	135738727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ES.1450.4	chr1	+	2477	2	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	2935	-13	intron_retention	FALSE	canonical	3	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGGTTTCCAATGGTT	6506	False	NA	30	True	ATTAAA	-11	NA	135735729	135738714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135735863_135736370
ES.1450.5	chr1	+	702	4	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	3003	-27	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	40.5983031938802	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGATCCA	6574	False	NA	16	True	NA	NA	NA	135735797	135738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135735863_135736370_135736548_135737363_135737474_135738350
ES.1450.6	chr1	+	690	4	NNC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	3266	-26	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	38.7384391356527	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATCCAG	6837	False	NA	17	True	NA	NA	NA	135736060	135738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135736113_135736370_135736548_135737363_135737474_135738350
ES.14500.1	chr17	-	174	1	Intergenic	novelGene_12173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATGTTC	6507	False	NA	-23	True	NA	NA	NA	23991594	23991420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_23991400_23991600
ES.14501.1	chr17	+	177	1	Intergenic	novelGene_12174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGGTTTGG	NA	False	NA	4	True	NA	NA	NA	24001074	24001251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24001100_24001300
ES.14502.1	chr17	-	690	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	3	1	3	-1	multi-exon	FALSE	canonical	3	11	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTAGTTTTTGTTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	24005052	23995890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_23996074_23998601_23999031_24004974
ES.14502.2	chr17	-	781	4	NNC	ENSMUSG00000023911.13	novel	891	4	NA	NA	-135	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24264068711928	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTAGTTTTTGTTGTTG	NA	False	NA	-1	True	AATAAA	-25	NA	24005190	23995890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23996074_23996785_23996915_23998601_23999031_24005150
ES.14502.3	chr17	-	1062	4	NNC	ENSMUSG00000023911.13	novel	891	4	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.65685424949238	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGGTAGTTTTTGTTG	NA	False	NA	-4	True	AATAAA	-22	NA	24005045	23995893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_23996074_23996785_23997168_23998601_23999031_24004974
ES.14503.1	chr17	-	142	1	Intergenic	novelGene_12175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAACA	6399	False	NA	NA	False	NA	NA	NA	24018837	24018695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24018700_24018800
ES.14504.1	chr17	-	194	1	Intergenic	novelGene_12176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTCCCTCCCCCCT	6051	False	NA	NA	False	NA	NA	NA	24019185	24018991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24019000_24019200
ES.14505.1	chr17	+	9014	15	FSM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	-145	-5	-145	0	multi-exon	FALSE	canonical	3	160	junction_12	24.3951316655515	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGTAGTCTTTACTT	NA	False	NA	16	True	AATAAA	-18	NA	24022015	24043715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.10	chr17	+	8935	16	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	77.8515396265367	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022182	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029389_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24040894_24040990_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.12	chr17	+	5335	11	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	27	5520	-7	2724	5prime_fragment	FALSE	canonical	3	184	junction_6	17.7654158408972	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACCAAGACAACTTCGAG	NA	False	NA	NA	False	NA	NA	NA	24022187	24038190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095
ES.14505.13	chr17	+	4969	16	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	54.5319478226602	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022190	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24035697_24039562_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.14	chr17	+	7363	12	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-3	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	62.2316387338798	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022191	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24039971_24043459
ES.14505.16	chr17	+	9973	16	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	5	0	intron_retention	FALSE	canonical	1	4	junction_11	79.5628053804037	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	NA	False	NA	11	True	AATAAA	-13	NA	24022199	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24038640_24038771_24040665_24040894_24041675_24041976_24042879_24042989_24043095_24043189
ES.14505.17	chr17	+	8694	16	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	53.633903042344	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022199	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24038640_24038771_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.18	chr17	+	2490	10	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	42	10851	-5	1285	5prime_fragment	FALSE	canonical	3	184	junction_6	18.3451140600581	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACTTTGCTGCTTGC	NA	False	NA	NA	False	TTTAAA	-11	NA	24022202	24032859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401
ES.14505.2	chr17	+	828	5	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	-5	14701	-5	7	5prime_fragment	FALSE	canonical	3	209	junction_1	15.9275704361965	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGAGGACGGTAAGTTGG	NA	False	NA	52	True	NA	NA	NA	24022155	24029009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942
ES.14505.20	chr17	+	8291	13	NNC	ENSMUSG00000039218.18	novel	459	3	NA	NA	402	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	77.556923539352	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTCTGTAGTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	24022609	24043713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022972_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041595_24043616
ES.14505.21	chr17	+	8986	7	NIC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	-32	1	intron_retention	FALSE	canonical	3	15	junction_1	81.1036716527406	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24030613	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24030706_24030790_24031595_24034095_24040665_24040894_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.22	chr17	+	9444	5	NIC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	-34	2	intron_retention	FALSE	canonical	3	161	junction_2	24.1764348074732	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGTCTGTAGTCTTTA	NA	False	NA	13	True	AATAAA	-15	NA	24030839	24043712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24031595_24034095_24040665_24041386_24042879_24042989_24043095_24043189
ES.14505.23	chr17	+	9735	5	NIC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	166	1	intron_retention	FALSE	canonical	3	19	junction_2	77.4483698989204	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24031039	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24031595_24034095_24040665_24040894_24042879_24042989_24043095_24043189
ES.14505.24	chr17	+	7789	6	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	9206	7	527	-2	3prime_fragment	FALSE	canonical	3	160	junction_3	23.6592476634402	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAATTGGTCTGTAGTC	NA	False	NA	9	True	AATAAA	-11	NA	24031400	24043708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.26	chr17	+	6840	3	FSM	ENSMUSG00000092981.3_ENSMUSG00000039218.18	ENSMUST00000190568.2	597	3	-5833	-410	-1616	1	multi-exon	FALSE	canonical	3	162	junction_1	16	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	1336	False	NA	12	True	AATAAA	-14	NA	24036665	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24042879_24042989_24043095_24043189
ES.14505.27	chr17	+	4554	4	NIC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	-423	-2	intron_retention	FALSE	canonical	3	160	junction_1	15.5777619273972	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAATTGGTCTGTAGTC	2529	False	NA	9	True	AATAAA	-11	NA	24037858	24043708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.28	chr17	+	4759	5	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-68	0	intron_retention	FALSE	canonical	2	7	junction_2	83.3801535138908	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	2884	False	NA	11	True	AATAAA	-13	NA	24038213	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24040665_24040894_24041675_24041976_24042879_24042989_24043095_24043189
ES.14505.29	chr17	+	4151	5	NIC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	445	0	intron_retention	FALSE	canonical	2	4	junction_2	84.1824655139062	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	484	False	NA	11	True	AATAAA	-13	NA	24038726	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24040665_24040894_24040990_24041386_24042879_24042989_24043095_24043189
ES.14505.3	chr17	+	3151	11	ISM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	-5	7736	-5	508	5prime_fragment	FALSE	canonical	3	184	junction_6	17.7654158408972	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCTCCAGACTCCACCA	NA	False	NA	NA	False	NA	NA	NA	24022155	24035974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095
ES.14505.30	chr17	+	1520	6	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	537	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.8987663169668	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	576	False	NA	11	True	AATAAA	-13	NA	24038818	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24039200_24040553_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.31	chr17	+	3360	5	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	540	0	intron_retention	FALSE	canonical	3	17	junction_3	80.4067783212336	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	579	False	NA	11	True	AATAAA	-13	NA	24038821	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24040665_24040894_24041675_24042764_24042879_24042992_24043095_24043189
ES.14505.33	chr17	+	1905	5	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	1033	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.1702350003383	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	1072	False	NA	11	True	AATAAA	-13	NA	24039314	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24040665_24040894_24040990_24041386_24041675_24042764_24042843_24043616
ES.14505.35	chr17	+	2359	5	NNC	ENSMUSG00000039218.18	novel	8564	14	NA	NA	-240	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	72.8114002062864	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAATTGGTCTGTAGTCT	1878	False	NA	10	True	AATAAA	-12	NA	24040120	24043709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24040665_24041386_24041675_24041976_24042879_24042989_24043095_24043189
ES.14505.36	chr17	+	2698	3	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	448	0	intron_retention	FALSE	canonical	0	0	junction_2	81	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	2566	False	NA	11	True	AATAAA	-13	NA	24040808	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24042879_24042989_24043097_24043189
ES.14505.4	chr17	+	8589	14	FSM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	-28	3	6	2	multi-exon	FALSE	canonical	3	19	junction_1	53.0972090553492	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGTCTGTAGTCTTTA	NA	False	NA	13	True	AATAAA	-15	NA	24022166	24043712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24022373_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.5	chr17	+	8282	14	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	57.9402875646723	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTCTGTAGTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	24022177	24043713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042843_24043616
ES.14505.6	chr17	+	3802	11	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.185964747022	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022177	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24038771_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ES.14505.8	chr17	+	1972	12	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-12	0	intron_retention	TRUE	non_canonical	0	0	junction_11	79.8116584619458	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	NA	False	NA	11	True	AATAAA	-13	NA	24022182	24043710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24030790_24031595_24034095_24034125_24043623
ES.14505.9	chr17	+	6973	11	NNC	ENSMUSG00000039218.18	novel	8864	15	NA	NA	-12	1	intron_retention	FALSE	non_canonical	0	0	junction_10	65.2509770041798	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGGTCTGTAGTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	24022182	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24031595_24034095_24038864_24043447
ES.14506.1	chr17	-	5304	11	Intergenic	novelGene_12177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCTTCGACTGCGCCAC	NA	False	NA	NA	False	NA	NA	NA	24038188	24022213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24022373_24025902_24026177_24027043_24027148_24027327_24027490_24028939_24029020_24029388_24029448_24029710_24029744_24030002_24030058_24030613_24030704_24031399_24031593_24034093
ES.14506.2	chr17	-	4452	2	Intergenic	novelGene_12178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCTTAGTCACATGACTC	NA	False	NA	NA	False	AATAAA	-5	NA	24038187	24031234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24031593_24034093
ES.14506.3	chr17	-	7002	1	Antisense	novelGene_ENSMUSG00000039218.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGTTGGGCAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	24039498	24032496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24032500_24039500
ES.14507.1	chr17	-	2248	2	Antisense	novelGene_ENSMUSG00000039218.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGCCACTGCTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	24042241	24039763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24040663_24040892
ES.14508.1	chr17	-	588	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-51	0	-51	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	False	NA	-3	True	AGTAAA	-18	NA	24048161	24043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ES.14508.10	chr17	-	2211	2	NNC	ENSMUSG00000055839.7	novel	564	2	NA	NA	1587	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGATTGACTTTTCT	NA	False	NA	-40	True	AATAAA	-14	NA	24046190	24043786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24045438_24045630
ES.14508.11	chr17	-	2922	3	NIC	ENSMUSG00000055839.7	novel	578	5	NA	NA	6	-4	intron_retention	FALSE	canonical	3	7596	junction_2	2320.5	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGATTGACTTTTCT	NA	False	NA	-40	True	AATAAA	-14	NA	24048082	24043786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24046548_24047817_24047953_24048056
ES.14508.3	chr17	-	4045	3	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	3798	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGCATTTCTCATTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	24048096	24043715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24045422_24045653_24047953_24048056
ES.14508.5	chr17	-	523	4	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5587.6633359174	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTGCATTTCTCATTT	NA	False	NA	-9	True	AGTAAA	-12	NA	24048109	24043717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24043954_24046441_24046548_24047817_24047946_24048056
ES.14508.6	chr17	-	419	3	FSM	ENSMUSG00000055839.7	ENSMUST00000233857.2	366	3	8	-61	8	1	multi-exon	FALSE	canonical	3	420	junction_2	5504	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTGCATTTCTCATTT	NA	False	NA	-9	True	AGTAAA	-12	NA	24047797	24043717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24043954_24046441_24046548_24047720
ES.14508.7	chr17	-	497	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	-20	-63	2	-1	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTACTGCATTTCTCAT	NA	False	NA	-11	True	AGTAAA	-10	NA	24048108	24043719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
ES.14508.8	chr17	-	544	5	FSM	ENSMUSG00000055839.7	ENSMUST00000233593.2	578	5	-36	70	2	-1	multi-exon	FALSE	canonical	3	73	junction_2	5034.57517448096	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTGACTTTTCTGTT	NA	False	NA	-37	True	AATAAA	-17	NA	24048108	24043783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24043954_24045559_24045641_24046441_24046548_24047817_24047953_24048056
ES.14508.9	chr17	-	323	3	NIC	ENSMUSG00000055839.7	novel	537	4	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	5693	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTGACTTTTCTGTT	NA	False	NA	-37	True	AATAAA	-17	NA	24048103	24043783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24043954_24046441_24046548_24048056
ES.14509.1	chr17	-	1601	6	NNC	ENSMUSG00000024114.16	novel	1128	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_2	10.6883113727099	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCACTCTGCAGCATT	NA	False	NA	NA	False	AATAAA	-18	NA	24063136	24055759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24056123_24056464_24056623_24061199_24061500_24062173_24062318_24062415_24062846_24062930
ES.14509.10	chr17	-	1817	4	NNC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-8	-57	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	3.39934634239519	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTCTGGCTTCGTTCA	NA	False	NA	-36	True	NA	NA	NA	24063137	24060082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24061500_24062173_24062318_24062415_24062585_24063050
ES.14509.11	chr17	-	1701	5	ISM	ENSMUSG00000024114.16	ENSMUST00000122936.8	1088	7	1	4324	1	-57	5prime_fragment	FALSE	canonical	1	1	junction_4	10.8857705285386	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTCTGGCTTCGTTCA	NA	False	NA	-36	True	NA	NA	NA	24063128	24060082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063073
ES.14509.12	chr17	-	1493	3	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	7	-216	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	9	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTGTGTTGACAATAC	NA	False	NA	NA	False	NA	NA	NA	24063116	24060241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062415_24062585_24063050
ES.14509.13	chr17	-	1525	5	NNC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-3	545	intron_retention	FALSE	canonical	3	10	junction_2	8.6421930087218	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAGCAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	24063149	24060674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24061500_24062173_24062318_24062415_24062846_24062930_24062958_24063050
ES.14509.14	chr17	-	768	2	NIC	ENSMUSG00000024114.16	novel	903	3	NA	NA	-12	260	intron_retention	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGTCTCTTTGACACT	NA	False	NA	NA	False	NA	NA	NA	24063158	24060959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062930
ES.14509.2	chr17	-	2866	3	FSM	ENSMUSG00000024114.16	ENSMUST00000141788.2	903	3	-48	-1915	-25	721	multi-exon	FALSE	canonical	3	22	junction_1	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACATATAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	24063171	24059304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24061500_24062415_24062846_24062930
ES.14509.3	chr17	-	2722	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	3	721	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACATATAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	24063120	24059304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
ES.14509.4	chr17	-	2164	5	NNC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-7	3	intron_retention	FALSE	canonical	3	10	junction_2	8.6421930087218	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGATGCCTTTAACTC	NA	False	NA	-3	True	NA	NA	NA	24063136	24060022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24061500_24062173_24062318_24062415_24062846_24062930_24062958_24063050
ES.14509.5	chr17	-	1782	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	10	7	-7	-7	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTCCAGTTTGGATG	NA	False	NA	-13	True	NA	NA	NA	24063136	24060032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
ES.14509.6	chr17	-	1700	3	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	1	-21	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	9	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTCATCCTTTCTCCT	NA	False	NA	0	True	NA	NA	NA	24063128	24060046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062415_24062585_24063050
ES.14509.7	chr17	-	1971	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	7	-26	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGATTCATCCTTT	NA	False	NA	-5	True	NA	NA	NA	24063116	24060051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
ES.14509.8	chr17	-	1879	6	NNC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-7	-54	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	7.74596669241483	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGGCTTCGTTCACAT	NA	False	NA	-33	True	NA	NA	NA	24063136	24060079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24061500_24062173_24062318_24062415_24062585_24062812_24062846_24062930_24062958_24063050
ES.14509.9	chr17	-	1831	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	-3	-56	intron_retention	FALSE	canonical	3	18	junction_2	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTGGCTTCGTTCAC	NA	False	NA	-35	True	NA	NA	NA	24063149	24060081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24061500_24062415_24062585_24062812_24062958_24063050
ES.1451.1	chr1	-	178	1	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATTCCAAAAAAAAT	NA	False	NA	-1	True	NA	NA	NA	135733871	135733693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135733700_135733900
ES.14510.1	chr17	+	3267	3	Antisense	novelGene_ENSMUSG00000117403.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACAGGCTTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	24109382	24134426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_24109927_24128567_24129750_24132885
ES.14510.2	chr17	+	5289	5	NNC	ENSMUSG00000057417.8	novel	678	3	NA	NA	-26903	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGTGTCCAAGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	24109528	24138412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24109722_24128895_24129750_24132885_24136632_24136934_24137038_24138019
ES.14511.1	chr17	+	5135	3	NNC	ENSMUSG00000024128.14	novel	920	4	NA	NA	1380	4642	intron_retention	FALSE	non_canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTAGGTTGTTTTGTTT	423	False	NA	NA	False	NA	NA	NA	24162736	24169223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24162843_24163980_24167404_24167617
ES.14512.1	chr17	-	4420	1	Intergenic	novelGene_12179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGGGTACAGAGC	9564	False	NA	NA	False	NA	NA	NA	24241825	24237405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24237400_24241800
ES.14512.2	chr17	-	5683	1	FSM	ENSMUSG00000077184.4	ENSMUST00000103996.4	129	1	-3233	-2321	-3233	2321	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACCTGTGGCGTATTT	5854	False	NA	20	True	NA	NA	NA	24245535	24239852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24239900_24245500
ES.14512.3	chr17	-	3855	2	Genic_Genomic	ENSMUSG00000077184.4	novel	129	1	NA	NA	-2707	2290	multi-exon	FALSE	canonical	3	10	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTCGCAGACAACGT	6380	False	NA	-11	True	AATAAA	-28	NA	24245009	24239883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_24240269_24241539
ES.14512.4	chr17	-	1759	1	FSM	ENSMUSG00000077184.4	ENSMUST00000103996.4	129	1	-1121	-509	-1121	509	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAATTGTGTTGTGTTT	7966	False	NA	NA	False	NA	NA	NA	24243423	24241664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24241700_24243400
ES.14512.5	chr17	-	6807	4	Intergenic	novelGene_12180	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAGGAGCCCACAGTT	215	False	NA	NA	False	NA	NA	NA	24251174	24244026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24249828_24249869_24250352_24250611_24250757_24250795
ES.14513.1	chr17	+	1207	7	NNC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	-5590	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.47430819985168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24251527	24264924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24251621_24257252_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
ES.14513.2	chr17	+	1276	7	NNC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	-452	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.47430819985168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4079	False	NA	NA	False	NA	NA	NA	24256665	24264923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24256829_24257252_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
ES.14513.3	chr17	+	1270	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	-22	5	-22	-5	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4509	False	NA	NA	False	NA	NA	NA	24257095	24264923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
ES.14513.4	chr17	+	930	4	NNC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	1152	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59966329107444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	5683	False	NA	NA	False	NA	NA	NA	24258269	24264924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24258359_24263233_24263506_24263832_24264003_24264525
ES.14513.5	chr17	+	1251	6	NNC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	1198	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.08801805866774	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAGAAAAGAAAAAAA	5729	False	NA	NA	False	NA	NA	NA	24258315	24264948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24258512_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
ES.14513.6	chr17	+	5220	1	Genic_Genomic	ENSMUSG00000050762.6	novel	NA	NA	NA	NA	6344	3753	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGAGCCCAGACTTG	NA	False	NA	NA	False	NA	NA	NA	24263461	24268681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_24263500_24268700
ES.14513.7	chr17	+	1494	1	Genic_Genomic	ENSMUSG00000050762.6	novel	NA	NA	NA	NA	6344	27	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24263461	24264955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_24263500_24265000
ES.14514.1	chr17	+	4813	14	Antisense	novelGene_ENSMUSG00000117557.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	24295067	24370393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_24298117_24298465_24298618_24299350_24299409_24306976_24307193_24310389_24310567_24312162_24312264_24312513_24312583_24317067_24317144_24319784_24319885_24320577_24320721_24325800_24325945_24326205_24326244_24329819_24330092_24370175
ES.14514.2	chr17	+	235	1	Intergenic	novelGene_12182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24300637	24300872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24300600_24300900
ES.14514.3	chr17	+	1401	1	Intergenic	novelGene_12189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1518	False	NA	NA	False	NA	NA	NA	24353611	24355012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24353600_24355000
ES.14514.4	chr17	+	178	1	Intergenic	novelGene_12190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGCCGGGT	NA	False	NA	NA	False	NA	NA	NA	24362758	24362936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24362800_24362900
ES.14515.1	chr17	-	2492	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	-35	-14	-35	14	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTTGAAGTGTGTGGA	NA	False	NA	-8	True	AATAAA	-34	NA	24292494	24266693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.10	chr17	-	2399	6	NNC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	30	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	429.595437592161	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTGTTCAGCAACTG	NA	False	NA	-30	True	AATAAA	-12	NA	24292429	24266715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278282_24279216_24279326_24292150
ES.14515.11	chr17	-	2309	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	13	121	13	-121	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCTAAGGGGATATTT	NA	False	NA	31	True	ATTAAA	-13	NA	24292446	24266828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.12	chr17	-	3977	5	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	-122	intron_retention	FALSE	canonical	3	983	junction_2	54.7054613361408	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCCTAAGGGGATATT	NA	False	NA	30	True	ATTAAA	-12	NA	24292425	24266829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24268419_24274898_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.13	chr17	-	1704	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	31	708	31	-708	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTTGTATAACTATGC	NA	False	NA	NA	False	NA	NA	NA	24292428	24267415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.14	chr17	-	1640	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	-77	880	-77	-880	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGCCTGTGGGCTCATG	NA	False	NA	-23	True	CATAAA	-20	NA	24292536	24267587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.15	chr17	-	4129	4	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	-899	intron_retention	FALSE	canonical	3	983	junction_2	62.9567752950829	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGTTTTGCCTCATATG	NA	False	NA	-42	True	CATAAA	-1	NA	24292425	24267606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24268419_24274898_24276811_24278195_24279326_24292150
ES.14515.16	chr17	-	3196	5	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	-903	intron_retention	FALSE	canonical	3	983	junction_2	54.7054613361408	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGAGGTTTTGCCTCA	NA	False	NA	-46	True	NA	NA	NA	24292425	24267610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24268419_24274898_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.17	chr17	-	154	1	Intergenic	novelGene_12181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24279937	24279783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24279800_24279900
ES.14515.18	chr17	-	778	1	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	33	-15913	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCATGTTCGGGGCCA	NA	False	NA	NA	False	AATAAA	-15	NA	24292426	24291648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24291600_24292400
ES.14515.19	chr17	-	7181	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGCCATGGAGCCT	NA	False	NA	-3	True	AATAAA	-18	NA	24360589	24292653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.2	chr17	-	2357	6	NNC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	37	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	415.590471498084	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGAATATCTTGAAGT	NA	False	NA	-15	True	AATAAA	-27	NA	24292422	24266700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24268419_24274898_24275005_24276750_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.21	chr17	-	5759	1	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	14358	1	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	-5	True	AATAAA	-16	NA	24298414	24292655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24292700_24298400
ES.14515.22	chr17	-	7043	13	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.7346765189022	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	-5	True	AATAAA	-16	NA	24360566	24292655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24325220_24325391_24326202_24326246_24329821_24330092_24360410
ES.14515.24	chr17	-	6947	13	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	41.2764225140159	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTTTGCCATGGAGC	NA	False	NA	-5	True	AATAAA	-16	NA	24360575	24292655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24298117_24298465_24298619_24299351_24299410_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.26	chr17	-	7022	13	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	42.2619969817907	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTTTGCCATGGAG	NA	False	NA	-6	True	AATAAA	-15	NA	24360546	24292656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24326177_24326246_24329821_24330092_24360410
ES.14515.28	chr17	-	7147	14	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.6418911175337	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGTTTGCCATGGA	NA	False	NA	-7	True	AATAAA	-14	NA	24360566	24292657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310562_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.29	chr17	-	7157	14	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	39.9912712369578	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGTTTGCCATGGA	NA	False	NA	-7	True	AATAAA	-14	NA	24360539	24292657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360380
ES.14515.3	chr17	-	4969	5	NNC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	4	intron_retention	FALSE	non_canonical	0	0	junction_3	451.185868018935	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACTGTGAATATCTTGA	NA	False	NA	-18	True	AATAAA	-24	NA	24292425	24266703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24268419_24274898_24276811_24278195_24278342_24278404_24279326_24292150
ES.14515.32	chr17	-	6935	13	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.0052396494088	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGTTTGCCATGGA	NA	False	NA	-7	True	AATAAA	-14	NA	24360573	24292657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298109_24298465_24298619_24299351_24299410_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.34	chr17	-	7290	15	NNC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	52.6286567394996	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACTTTGTTTGCCATGG	NA	False	NA	-8	True	AATAAA	-13	NA	24360553	24292658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24328155_24328306_24329821_24330092_24360410
ES.14515.35	chr17	-	5951	5	ISM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	50002	114	2205	-111	3prime_fragment	FALSE	canonical	3	133	junction_3	12.73528562695	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTTTCTTTTTTTTGTT	5755	False	NA	NA	False	TATAAA	-42	NA	24310567	24292767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394
ES.14515.36	chr17	-	5703	6	ISM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	48379	389	582	-386	3prime_fragment	FALSE	canonical	3	133	junction_3	12.0399335546339	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCAATGATACTGGGAT	4132	False	NA	NA	False	ATTAAA	-19	NA	24312190	24293042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164
ES.14515.37	chr17	-	5582	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	18	1561	-1	571	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTACATGCCTAATGGA	NA	False	NA	NA	False	GATAAA	-14	NA	24360551	24294214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.38	chr17	-	5177	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	-19	2003	-19	129	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTCTTTGATTTTTT	NA	False	NA	NA	False	AATATA	-2	NA	24360588	24294656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.39	chr17	-	4770	12	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-6	127	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.1260403618603	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAAGTCTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	24360575	24294658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24298117_24298465_24298619_24299351_24299410_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.4	chr17	-	4108	5	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	29	4	intron_retention	FALSE	canonical	3	983	junction_2	54.7054613361408	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACTGTGAATATCTTGA	NA	False	NA	-18	True	AATAAA	-24	NA	24292430	24266703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24268419_24274898_24276811_24278195_24278288_24279216_24279326_24292150
ES.14515.40	chr17	-	4758	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	1	2402	1	-270	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCACTGTGAACATTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	24360568	24295055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.41	chr17	-	3657	13	ISM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	30684	3139	9883	-1007	3prime_fragment	FALSE	canonical	3	123	junction_7	12.5595802300696	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTTAAATCACCTTCA	NA	False	NA	NA	False	AATGAA	-22	NA	24329885	24295792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821
ES.14515.42	chr17	-	2377	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	2	4782	2	419	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGGTCAGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	24360567	24297435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.43	chr17	-	4299	9	NNC	ENSMUSG00000024122.17	novel	691	7	NA	NA	-7921	4165	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.4461278743312	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGTAACATTTGATAC	NA	False	NA	NA	False	NA	NA	NA	24320693	24302989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24305584_24305701_24306288_24306708_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575
ES.14515.44	chr17	-	2833	1	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	-13032	12	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTTTTTGCATGAAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	24325804	24322971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24323000_24325800
ES.14515.45	chr17	-	196	1	Intergenic	novelGene_12183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGACCATTCTATCT	NA	False	NA	NA	False	NA	NA	NA	24337814	24337618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24337600_24337800
ES.14515.46	chr17	-	156	1	Intergenic	novelGene_12184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATC	9108	False	NA	NA	False	NA	NA	NA	24341982	24341826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24341800_24342000
ES.14515.47	chr17	-	1543	1	Intergenic	novelGene_12185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1058	False	NA	NA	False	NA	NA	NA	24350032	24348489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24348500_24350000
ES.14515.48	chr17	-	4425	2	Intergenic	novelGene_12186	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTATGGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	24356356	24351465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24354419_24354884
ES.14515.49	chr17	-	4885	1	Intergenic	novelGene_12187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACTTTGTATGGTGT	NA	False	NA	NA	False	NA	NA	NA	24356356	24351471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24351500_24356400
ES.14515.5	chr17	-	3333	5	NIC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	-5	intron_retention	FALSE	canonical	3	983	junction_3	72.3027489103976	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTCAGCAACTGTGA	NA	False	NA	-27	True	AATAAA	-15	NA	24292425	24266712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24279326_24292150
ES.14515.50	chr17	-	177	1	Intergenic	novelGene_12188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAGCAAAATA	NA	False	NA	NA	False	NA	NA	NA	24352182	24352005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24352000_24352200
ES.14515.8	chr17	-	3388	15	Fusion	ENSMUSG00000024122.17_ENSMUSG00000016946.7	novel	691	7	NA	NA	7	-8	multi-exon	FALSE	canonical	0	0	junction_5	413.225225191655	936	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTGTTCAGCAACTG	NA	False	NA	-30	True	AATAAA	-12	NA	24360562	24266715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ES.14515.9	chr17	-	2407	6	NNC	ENSMUSG00000016946.7	novel	2443	6	NA	NA	34	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	415.590471498084	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTGTTCAGCAACTG	NA	False	NA	-30	True	AATAAA	-12	NA	24292425	24266715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24268419_24274898_24275025_24276708_24276811_24278195_24278288_24279216_24279326_24292150
ES.14516.1	chr17	-	1392	10	NNC	ENSMUSG00000036820.13	novel	1225	2	NA	NA	12	11365	intron_retention	TRUE	canonical	0	0	junction_1	106.588281384001	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGTACCTTGGCA	NA	False	NA	NA	False	NA	NA	NA	24382655	24363441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24363596_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
ES.14516.10	chr17	-	3078	6	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-1363	0	intron_retention	FALSE	canonical	3	307	junction_3	14.4858551697855	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24378372	24374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613
ES.14516.11	chr17	-	1180	10	NNC	ENSMUSG00000036820.13	novel	1530	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.953780256292	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382659	24374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24375060_24375544_24375647_24376501_24376549_24376996_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.12	chr17	-	1413	10	NNC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	108.656895720678	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCGTCATGCTTT	NA	False	NA	-13	True	GATAAA	-19	NA	24382705	24374807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377503_24381947_24382090_24382169_24382307_24382555
ES.14516.13	chr17	-	1541	9	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	306	junction_6	20.1602951367285	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTCTGCGTCATGCTT	NA	False	NA	-14	True	GATAAA	-18	NA	24382629	24374808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.14	chr17	-	1346	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	106.489436095793	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTCTGCGTCATGCTT	NA	False	NA	-14	True	GATAAA	-18	NA	24382647	24374808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24381949_24382090_24382169_24382307_24382555
ES.14516.15	chr17	-	1185	8	NNC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-455	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.904932449372	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTCTGCGTCATGCTT	NA	False	NA	-14	True	GATAAA	-18	NA	24377464	24374808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24375060_24375544_24375647_24376090_24376331_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283
ES.14516.16	chr17	-	1583	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	306	junction_7	21.3980499861524	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTCTGCGTCATGCTT	NA	False	NA	-14	True	GATAAA	-18	NA	24382712	24374808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.17	chr17	-	1453	11	NNC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.76619093846	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTCTGCGTCATGCT	NA	False	NA	-15	True	GATAAA	-17	NA	24382655	24374809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24375060_24375544_24375647_24376501_24376616_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.18	chr17	-	1921	10	NIC	ENSMUSG00000036820.13	novel	1651	12	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	306	junction_7	18.661374911304	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTCTGCGTCATGCT	NA	False	NA	-15	True	GATAAA	-17	NA	24382683	24374809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.19	chr17	-	1168	3	ISM	ENSMUSG00000036820.13	ENSMUST00000130520.2	1530	10	21	6380	-16	7	5prime_fragment	FALSE	canonical	3	317	junction_1	21.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGATTTTCTCTGTTCCT	NA	False	NA	NA	False	AGTAAA	-23	NA	24382683	24381186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24382090_24382169_24382307_24382555
ES.14516.2	chr17	-	3243	1	Intergenic	novelGene_12191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACACATCCATATTTTG	NA	False	NA	NA	False	NA	NA	NA	24369514	24366271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24366300_24369500
ES.14516.20	chr17	-	1232	2	FSM	ENSMUSG00000036820.13	ENSMUST00000131766.2	1225	2	-5	-2	-5	2	multi-exon	FALSE	canonical	3	360	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGAATGGATTTTCTCTG	NA	False	NA	NA	False	AGTAAA	-18	NA	24382672	24381191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24382307_24382555
ES.14516.3	chr17	-	7058	4	NIC	ENSMUSG00000036820.13	novel	1651	12	NA	NA	-960	4123	intron_retention	FALSE	canonical	3	307	junction_2	18.1169043222683	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTGTACCACGAGGGG	NA	False	NA	NA	False	NA	NA	NA	24377969	24370683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24376822_24376891_24377037_24377117_24377207_24377283
ES.14516.4	chr17	-	1572	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	5	1	intron_retention	FALSE	canonical	3	306	junction_8	20.5804653872442	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCGTCATGCTTTGA	NA	False	NA	-11	True	GATAAA	-21	NA	24382735	24374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
ES.14516.5	chr17	-	2248	7	NIC	ENSMUSG00000036820.13	novel	1651	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	306	junction_5	21.5870331449229	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCGTCATGCTTTGA	NA	False	NA	-11	True	GATAAA	-21	NA	24382666	24374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283_24377669_24381949_24382307_24382555
ES.14516.6	chr17	-	1490	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	7	-1	7	1	multi-exon	FALSE	canonical	3	306	junction_8	20.5156038175824	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCGTCATGCTTTGA	NA	False	NA	-11	True	GATAAA	-21	NA	24382733	24374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ES.14516.7	chr17	-	1787	9	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	14	junction_8	105.998157413231	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382683	24374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
ES.14516.8	chr17	-	1379	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	102.741435015946	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382760	24374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
ES.14516.9	chr17	-	1603	12	FSM	ENSMUSG00000036820.13	ENSMUST00000129523.3	1526	12	-77	0	-11	0	multi-exon	FALSE	canonical	2	7	junction_9	128.890369200834	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382715	24374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24380555_24380688_24381949_24382090_24382169_24382307_24382555
ES.14517.1	chr17	+	176	1	Intergenic	novelGene_12193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAAGCCCGCC	7915	False	NA	NA	False	NA	NA	NA	24406524	24406700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24406500_24406700
ES.14518.1	chr17	+	2697	1	Genic_Genomic	ENSMUSG00000085185.11	novel	NA	NA	NA	NA	-1241	-11229	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGACCGTCTACAGCCT	1085	False	NA	NA	False	AATAAA	-19	NA	24426593	24429290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_24426600_24429300
ES.14519.1	chr17	-	5362	3	NNC	ENSMUSG00000024121.14	novel	2567	3	NA	NA	36	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1546.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGTGTTCTGGCGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	24388399	24382837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24384920_24385029
ES.14519.10	chr17	-	1077	4	NNC	ENSMUSG00000024121.14	novel	796	4	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1264.20963451478	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGGCTTGTGTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	24388407	24382844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383032_24383104_24383583_24383672_24383857_24388179
ES.14519.12	chr17	-	928	3	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	47	88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1546.5	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGTCTGTGGAGCAGCT	NA	False	NA	NA	False	TATAAA	-15	NA	24388388	24383038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24383848_24388179
ES.14519.13	chr17	-	971	5	Fusion	ENSMUSG00000036473.17_ENSMUSG00000024121.14	novel	796	4	NA	NA	0	88	multi-exon	FALSE	canonical	0	0	junction_3	1267.08077386566	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGTCTGTGGAGCAGCT	NA	False	NA	NA	False	TATAAA	-15	NA	24424499	24383038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_24383583_24383672_24383857_24388179_24388261_24408917_24409028_24424447
ES.14519.14	chr17	-	1012	4	NNC	ENSMUSG00000024121.14	novel	796	4	NA	NA	24	88	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1437.92837095594	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGTCTGTGGAGCAGCT	NA	False	NA	NA	False	TATAAA	-15	NA	24388411	24383038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24383857_24386487_24386540_24388179
ES.14519.15	chr17	-	3855	1	Intergenic	novelGene_12192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAACAACCTTCGATGC	NA	False	NA	NA	False	NA	NA	NA	24394379	24390524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24390500_24394400
ES.14519.16	chr17	-	7637	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	1	6	intron_retention	FALSE	canonical	0	0	junction_1	9.33742469849155	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTGTCATGAGAGT	NA	False	NA	-1	True	AATAAA	-29	NA	24424496	24394398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.17	chr17	-	7176	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4219616172109	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTACATCTGTGTC	NA	False	NA	-9	True	AATAAA	-21	NA	24424591	24394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.18	chr17	-	7384	7	NNC	ENSMUSG00000036473.17	novel	4098	8	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	12.684198393627	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTTTGTACATCTGTGT	NA	False	NA	-10	True	AATAAA	-20	NA	24424496	24394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24402823_24408917_24409028_24424447
ES.14519.19	chr17	-	6431	7	NNC	ENSMUSG00000036473.17	novel	4261	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_1	13.0256157883866	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATCTTTGTACATCTGT	NA	False	NA	-12	True	AATAAA	-18	NA	24424495	24394409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24424447
ES.14519.2	chr17	-	1400	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	-216	-1	0	1	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388651	24382838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24383583_24383672_24383857_24388179
ES.14519.20	chr17	-	7538	9	NNC	ENSMUSG00000036473.17	novel	4098	8	NA	NA	1	-5	intron_retention	TRUE	non_canonical	0	0	junction_1	11.8999737394668	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATCTTTGTACATCTG	NA	False	NA	-13	True	AATAAA	-17	NA	24424496	24394410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399028_24399153_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402823_24404173_24405176_24408917_24409028_24424447
ES.14519.22	chr17	-	6363	6	NNC	ENSMUSG00000036473.17	novel	4261	8	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_1	11.47170431976	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATCTTTGTACATCTG	NA	False	NA	-13	True	AATAAA	-17	NA	24424492	24394410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24402667_24402827_24424447
ES.14519.23	chr17	-	178	1	ISM	ENSMUSG00000036473.17	ENSMUST00000168410.9	7683	8	29733	194	5353	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	24394776	24394598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24394600_24394800
ES.14519.24	chr17	-	5548	10	NNC	ENSMUSG00000036473.17	novel	3806	10	NA	NA	-1	-27	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.4060845793856	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTTTATGACTTCC	NA	False	NA	NA	False	NA	NA	NA	24424494	24395911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399032_24399157_24399651_24400137_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24424447
ES.14519.25	chr17	-	6100	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	0	-53	intron_retention	TRUE	non_canonical	0	0	junction_1	9.33742469849155	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAACAAACAGACA	NA	False	NA	NA	False	NA	NA	NA	24424499	24395937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.26	chr17	-	4965	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	-41	377	intron_retention	FALSE	canonical	0	0	junction_1	9.33742469849155	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCTGTCTGCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	24424577	24397151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.27	chr17	-	6073	6	NNC	ENSMUSG00000036473.17	novel	4261	8	NA	NA	-4923	370	intron_retention	FALSE	non_canonical	0	0	junction_1	12.5123938556936	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTATAAGCTGTCTGC	9425	False	NA	NA	False	NA	NA	NA	24405052	24397158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24402037_24402667
ES.14519.28	chr17	-	4806	9	NNC	ENSMUSG00000036473.17	novel	4383	9	NA	NA	-10	362	intron_retention	FALSE	canonical	0	0	junction_1	9.74679434480896	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCTATTTTTTATAAG	NA	False	NA	NA	False	NA	NA	NA	24424519	24397166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24424447
ES.14519.29	chr17	-	4331	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	1	360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4219616172109	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTATTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	24424508	24397168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.3	chr17	-	5484	2	ISM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	23	-1	23	1	intron_retention	FALSE	canonical	3	3093	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	24388412	24382838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24383583_24383672
ES.14519.30	chr17	-	4952	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	-46	360	intron_retention	FALSE	non_canonical	0	0	junction_1	9.33742469849155	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTATTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	24424582	24397168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.32	chr17	-	4323	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-2	360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4219616172109	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTATTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	24424501	24397168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.33	chr17	-	5087	10	NNC	ENSMUSG00000036473.17	novel	3806	10	NA	NA	1	360	intron_retention	TRUE	non_canonical	0	0	junction_1	11.957744533188	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTATTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	24424492	24397168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399054_24399180_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24414237_24414550_24424447
ES.14519.34	chr17	-	4800	8	NNC	ENSMUSG00000036473.17	novel	6269	8	NA	NA	-1	360	intron_retention	FALSE	non_canonical	0	0	junction_1	10.9376712814577	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTATTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	24424494	24397168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.36	chr17	-	3436	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-2	359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9283882771841	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCCTATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	24424491	24397169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24399651_24400043_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402823_24404383_24404440_24408917_24409028_24424447
ES.14519.37	chr17	-	4788	9	NNC	ENSMUSG00000036473.17	novel	4383	9	NA	NA	1	356	intron_retention	FALSE	non_canonical	0	0	junction_1	9.74679434480896	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTTTCCTATTTTT	NA	False	NA	NA	False	NA	NA	NA	24424508	24397172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24424447
ES.14519.38	chr17	-	3896	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-59	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4219616172109	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTTTATGATTTGCTT	NA	False	NA	NA	False	AATATA	-27	NA	24424595	24397690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.39	chr17	-	4246	9	NNC	ENSMUSG00000036473.17	novel	4383	9	NA	NA	22	2	intron_retention	FALSE	canonical	0	0	junction_1	11.3880419739304	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAAGCTCAGTTTAT	NA	False	NA	NA	False	AATATA	-18	NA	24418909	24397699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24418864
ES.14519.40	chr17	-	4287	9	NNC	ENSMUSG00000036473.17	novel	4305	8	NA	NA	-12	5	intron_retention	FALSE	canonical	0	0	junction_1	11.0538454847171	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCATTCGTTAAACTAA	NA	False	NA	NA	False	TTTAAA	-21	NA	24424521	24397753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424467
ES.14519.41	chr17	-	4178	9	NNC	ENSMUSG00000036473.17	novel	4383	9	NA	NA	1	-13	intron_retention	FALSE	canonical	0	0	junction_1	9.74679434480896	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTAATCCAATTTAA	NA	False	NA	NA	False	TTTAAA	-3	NA	24424496	24397771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405176_24408917_24409028_24424447
ES.14519.42	chr17	-	4251	9	NNC	ENSMUSG00000036473.17	novel	4081	9	NA	NA	0	12	intron_retention	FALSE	non_canonical	0	0	junction_1	9.33742469849155	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCAAACATTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	24424509	24397796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399033_24399158_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.43	chr17	-	4028	9	NNC	ENSMUSG00000036473.17	novel	4098	8	NA	NA	1	58	intron_retention	FALSE	canonical	0	0	junction_1	12.0933866224478	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTGTTCTCACTTAG	NA	False	NA	NA	False	NA	NA	NA	24424496	24397917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402823_24404177_24405176_24408917_24409028_24424447
ES.14519.44	chr17	-	3555	10	NNC	ENSMUSG00000036473.17	novel	7265	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4219616172109	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGTGTATTGTTTTC	NA	False	NA	NA	False	TTTAAA	-34	NA	24424539	24397975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24399096_24399220_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.45	chr17	-	2099	7	ISM	ENSMUSG00000036473.17	ENSMUST00000201089.4	4081	9	-86	2976	-43	-1	5prime_fragment	FALSE	canonical	3	20	junction_4	4.17997873466148	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGTAGTTCGAGGG	NA	False	NA	NA	False	GATAAA	-16	NA	24424579	24400504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ES.14519.46	chr17	-	5090	6	FSM	ENSMUSG00000117406.2	ENSMUST00000024931.6	5038	6	-14	-38	-14	38	multi-exon	FALSE	canonical	1	1	junction_4	1.83303027798234	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTGAGCATACCTT	NA	False	NA	NA	False	NA	NA	NA	24428519	24422783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24425922_24426181_24426257_24426366_24426418_24426539_24426690_24426772_24426962_24427032
ES.14519.47	chr17	-	3701	6	FSM	ENSMUSG00000117406.2_ENSMUSG00000036473.17	ENSMUST00000234909.2	704	6	-3	-2994	2	17	multi-exon	FALSE	canonical	1	1	junction_4	1.83303027798234	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCCCTGTTGAATGTT	NA	False	NA	NA	False	AATGAA	-27	NA	24428376	24422804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24425922_24426181_24426257_24426366_24426418_24426539_24426690_24426772_24426962_24428257
ES.14519.48	chr17	-	4286	6	FSM	ENSMUSG00000117406.2	ENSMUST00000024931.6	5038	6	191	561	59	-14	multi-exon	FALSE	canonical	1	1	junction_4	1.83303027798234	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGACCATTCATATTG	NA	False	NA	NA	False	AAGAAA	-13	NA	24428314	24423382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24425922_24426181_24426257_24426366_24426418_24426539_24426690_24426772_24426962_24427032
ES.14519.5	chr17	-	5397	3	NNC	ENSMUSG00000024121.14	novel	2567	3	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1546.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24388437	24382839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24384942_24385052
ES.14519.6	chr17	-	1224	4	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1457.11160252817	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24388406	24382839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24383857_24386487_24386558_24388179
ES.14519.7	chr17	-	1072	4	FSM	ENSMUSG00000024121.14	ENSMUST00000098862.9	796	4	11	-287	11	0	multi-exon	FALSE	canonical	2	51	junction_3	1244.06671846811	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24388640	24382839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24383583_24383672_24383857_24388179_24388261_24388576
ES.14519.8	chr17	-	2110	3	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1546.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGCTTGTGTTCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	24388367	24382841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24383857_24387182
ES.14519.9	chr17	-	2842	3	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	1545	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGCTTGTGTTCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	24388404	24382841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24383583_24383672_24383857_24386487
ES.1452.1	chr1	+	2606	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	11	376	11	259	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGGTAATGTCGAT	5629	False	NA	17	True	NA	NA	NA	135746346	135760704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
ES.1452.2	chr1	+	2929	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	78	-14	78	14	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTTCCATACTTTTCCC	5696	False	NA	NA	False	CATAAA	-1	NA	135746413	135761094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
ES.1452.4	chr1	+	1916	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	326	751	326	-116	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCCATGGAGTGTCCAT	5944	False	NA	NA	False	NA	NA	NA	135746661	135760329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
ES.1452.5	chr1	+	2306	10	NNC	ENSMUSG00000041782.15	novel	2993	10	NA	NA	339	259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.1713833959399	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGGTAATGTCGAT	5957	False	NA	17	True	NA	NA	NA	135746674	135760704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758792_135758959_135759262_135759350_135759611_135759687_135760049
ES.14520.1	chr17	-	2476	8	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	185	junction_7	22.642744479215	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGGGCAGTGGTGGTGC	3351	False	NA	NA	False	NA	NA	NA	24439750	24434027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439590_24439664
ES.14520.10	chr17	-	3568	7	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	185	junction_6	16.4282953738021	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3352	False	NA	0	True	AATAAA	-21	NA	24439749	24434212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.11	chr17	-	2188	9	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	183	junction_6	23.7802439011882	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3374	False	NA	0	True	AATAAA	-21	NA	24439727	24434212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.12	chr17	-	1879	11	NNC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	10	junction_1	65.7100448942169	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3342	False	NA	0	True	AATAAA	-21	NA	24439759	24434212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24434463_24434559_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.13	chr17	-	7465	26	Fusion	ENSMUSG00000024118.15_ENSMUSG00000072082.8	novel	4133	17	NA	NA	-20	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	308.088818362498	941	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGGCTTGACGGTTA	8717	False	NA	-1	True	AATAAA	-20	NA	24470341	24434213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449365_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.14	chr17	-	3053	6	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	15	-5	intron_retention	FALSE	canonical	3	185	junction_5	24.1958674157386	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGAGATGGCTTGACG	3352	False	NA	-5	True	AATAAA	-16	NA	24439749	24434217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24439590_24439664
ES.14520.15	chr17	-	1936	10	NNC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	3	-9	intron_retention	FALSE	canonical	0	0	junction_3	71.3542717625612	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTGGAGAGATGGCTT	3377	False	NA	-9	True	AATAAA	-12	NA	24439724	24434221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436858_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.17	chr17	-	1975	10	NNC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	12	-15	intron_retention	FALSE	canonical	3	10	junction_1	69.1205781297267	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGAGCTGGAGAGA	3349	False	NA	-15	True	AATAAA	-6	NA	24439752	24434227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24434463_24434559_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.18	chr17	-	2090	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	55	15	-6	-15	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGAGCTGGAGAGA	3331	False	NA	-15	True	AATAAA	-6	NA	24439770	24434227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.19	chr17	-	1591	8	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	10	-15	intron_retention	FALSE	canonical	3	24	junction_6	73.2602294870129	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGAGCTGGAGAGA	3384	False	NA	-15	True	AATAAA	-6	NA	24439717	24434227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24439225_24439285_24439490
ES.14520.21	chr17	-	1666	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	7	493	7	-1	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTTGGTTTCTTGTTT	3344	False	NA	-8	True	TTTAAA	-27	NA	24439757	24434520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.22	chr17	-	2519	7	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	185	junction_6	24.2103054274185	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTTGGTTTCTTGTTT	3339	False	NA	-8	True	TTTAAA	-27	NA	24439762	24434520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24439590_24439664
ES.14520.23	chr17	-	3266	7	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	5	-5	intron_retention	FALSE	canonical	3	185	junction_6	16.4282953738021	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCTTTTTGGTTTCTT	3342	False	NA	-12	True	TTTAAA	-23	NA	24439759	24434524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.24	chr17	-	2964	8	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	3	-6	intron_retention	FALSE	canonical	3	185	junction_7	16.5529453572468	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGCTTTTTGGTTTCT	3399	False	NA	-13	True	TTTAAA	-22	NA	24439702	24434525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24434980_24435223_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.26	chr17	-	4263	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	27	-157	27	157	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTTCCCTGTCCT	8702	False	NA	NA	False	NA	NA	NA	24470356	24441014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.27	chr17	-	3792	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	-4	345	-4	-345	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCCTCCCATCTTGTT	8671	False	NA	NA	False	NA	NA	NA	24470387	24441516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.28	chr17	-	3762	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-11	-346	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	210.019344347134	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTCCTCCCATCTTGT	8726	False	NA	NA	False	NA	NA	NA	24470332	24441517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468406_24470268
ES.14520.29	chr17	-	3838	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-347	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTCCTCCCATCTTG	8737	False	NA	NA	False	NA	NA	NA	24470321	24441518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
ES.14520.3	chr17	-	2265	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	76	-181	15	-4	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3352	False	NA	NA	False	NA	NA	NA	24439749	24434031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.30	chr17	-	3498	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	83	552	-8	-552	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTCTCTGTTTTCTGTT	8758	False	NA	NA	False	AAGAAA	-44	NA	24470300	24441723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.31	chr17	-	3287	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	53	793	-9	-793	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCCACAAAGATGCAGGA	8728	False	NA	NA	False	CATAAA	-19	NA	24470330	24441964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.32	chr17	-	3111	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-28	-1015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	206.146252315559	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAGAAAAAATCTAG	8709	False	NA	13	True	AATAAA	-36	NA	24470349	24442186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453536_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.33	chr17	-	3134	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	-31	1030	-31	-1030	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTGCTTCAACTGAAA	8644	False	NA	-2	True	AATAAA	-21	NA	24470414	24442201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.34	chr17	-	3095	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-5	-1030	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_16	207.955514699058	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTGCTTCAACTGAAA	8670	False	NA	-2	True	AATAAA	-21	NA	24470388	24442201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468367_24470268
ES.14520.35	chr17	-	5420	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-3	-1032	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	211.757000695963	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8672	False	NA	-4	True	AATAAA	-19	NA	24470386	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24451681_24451825_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.37	chr17	-	5046	15	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-20	-1032	intron_retention	FALSE	canonical	3	665	junction_14	78.2775347655992	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8717	False	NA	-4	True	AATAAA	-19	NA	24470341	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24459858_24460361_24460416_24461113_24461308_24462252_24463561_24468224_24468380_24470268
ES.14520.39	chr17	-	2963	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-20	-1032	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	207.244119337558	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8717	False	NA	-4	True	AATAAA	-19	NA	24470341	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450380_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.4	chr17	-	2156	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	6	4	6	-4	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3343	False	NA	NA	False	NA	NA	NA	24439758	24434031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.40	chr17	-	3642	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	20	-1032	intron_retention	FALSE	canonical	3	665	junction_15	79.6181442190716	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8695	False	NA	-4	True	AATAAA	-19	NA	24470363	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.41	chr17	-	2931	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	3	-1032	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	216.042650110266	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8740	False	NA	-4	True	AATAAA	-19	NA	24470318	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.42	chr17	-	3152	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	1	-1032	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8738	False	NA	-4	True	AATAAA	-19	NA	24470320	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
ES.14520.43	chr17	-	4210	2	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	23409	1032	2723	-1032	intron_retention	FALSE	canonical	3	804	junction_1	0	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8331	False	NA	-4	True	AATAAA	-19	NA	24446974	24442203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24443321_24443881
ES.14520.48	chr17	-	3215	18	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-17	-1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	314.304295725367	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8720	False	NA	-6	True	AATAAA	-17	NA	24470338	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450513_24450758_24450883_24453343_24453509_24454509_24454624_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.5	chr17	-	2391	9	NIC	ENSMUSG00000024118.15	novel	2166	10	NA	NA	15	-4	intron_retention	FALSE	canonical	3	183	junction_6	23.7802439011882	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTACCGGGCAGTGGTG	3352	False	NA	NA	False	NA	NA	NA	24439749	24434031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ES.14520.50	chr17	-	5563	15	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	11	-1034	intron_retention	FALSE	canonical	3	7	junction_4	220.380063637752	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8748	False	NA	-6	True	AATAAA	-17	NA	24470310	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445758_24449289_24449373_24450284_24450466_24450758_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.51	chr17	-	3056	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-25	-1034	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	203.745235757183	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8712	False	NA	-6	True	AATAAA	-17	NA	24470346	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443315_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.52	chr17	-	4149	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-8	-1034	intron_retention	FALSE	canonical	3	665	junction_15	76.7855889257006	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8758	False	NA	-6	True	AATAAA	-17	NA	24470300	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24463561_24468224_24468380_24470268
ES.14520.53	chr17	-	3143	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-25	-1034	intron_retention	FALSE	canonical	3	665	junction_15	78.5571554135374	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8712	False	NA	-6	True	AATAAA	-17	NA	24470346	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.54	chr17	-	3057	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-26	-1034	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	207.346479352797	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8711	False	NA	-6	True	AATAAA	-17	NA	24470347	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459758_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.55	chr17	-	3063	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-5	-1034	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	208.872484649726	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8732	False	NA	-6	True	AATAAA	-17	NA	24470326	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470247
ES.14520.58	chr17	-	3171	18	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-20	-1034	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	266.84429061257	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTGTGCTTCAACT	8717	False	NA	-6	True	AATAAA	-17	NA	24470341	24442205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24454509_24454624_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.60	chr17	-	3099	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-328	-1035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	275.268249849124	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTACTGTGCTTCAAC	8272	False	NA	-7	True	AATAAA	-16	NA	24470786	24442206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443315_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470664
ES.14520.62	chr17	-	3701	15	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	8	-1035	intron_retention	FALSE	canonical	0	0	junction_11	290.89292510742	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTACTGTGCTTCAAC	8745	False	NA	-7	True	AATAAA	-16	NA	24470313	24442206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24444052_24445448_24445758_24449289_24449373_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462216_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.63	chr17	-	3035	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-5	-1036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	280.423312823667	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTACTGTGCTTCAA	8732	False	NA	-8	True	AATAAA	-15	NA	24470326	24442207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450874_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470264
ES.14520.65	chr17	-	7384	14	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	6	-1036	intron_retention	FALSE	non_canonical	0	0	junction_4	234.160871217775	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTACTGTGCTTCAA	8743	False	NA	-8	True	AATAAA	-15	NA	24470315	24442207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24445758_24449289_24449378_24450284_24450466_24450758_24451681_24451825_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.66	chr17	-	4080	15	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-20	-1037	intron_retention	FALSE	canonical	3	665	junction_14	80.9121468643867	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATATTACTGTGCTTCA	8717	False	NA	-9	True	AATAAA	-14	NA	24470341	24442208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.67	chr17	-	3051	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-11	-1039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.611820322023	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAATATTACTGTGCTT	8726	False	NA	-11	True	AATAAA	-12	NA	24470332	24442210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443329_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.68	chr17	-	3581	16	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-14	-1056	intron_retention	FALSE	canonical	2	4	junction_6	217.514505263442	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAGATAACAGATCC	8723	False	NA	-28	True	AATAGA	-9	NA	24470335	24442227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450874_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.69	chr17	-	3915	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	16	-1056	intron_retention	FALSE	canonical	3	665	junction_15	78.7695936823905	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAGATAACAGATCC	8691	False	NA	-28	True	AATAGA	-9	NA	24470367	24442227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.7	chr17	-	2404	9	NNC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	15	-12	intron_retention	FALSE	canonical	3	10	junction_1	73.3100223366492	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	3352	False	NA	NA	False	NA	NA	NA	24439749	24434039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24434463_24434559_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ES.14520.70	chr17	-	3043	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	-41	1131	34	-1131	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGCCTGTCTTTAT	8634	False	NA	-15	True	NA	NA	NA	24470424	24442302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.71	chr17	-	3590	15	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-11	-1134	intron_retention	FALSE	canonical	3	665	junction_14	81.2372438966166	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATTCTTTGCCTGTCTT	8726	False	NA	-18	True	NA	NA	NA	24470332	24442305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24444052_24445448_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.72	chr17	-	2953	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-24	-1136	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	207.346479352797	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCATTCTTTGCCTGTC	8713	False	NA	-20	True	NA	NA	NA	24470345	24442307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459758_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.73	chr17	-	3046	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-397	-1136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	210.248801646407	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCATTCTTTGCCTGTC	8203	False	NA	-20	True	NA	NA	NA	24470855	24442307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470691
ES.14520.74	chr17	-	3030	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	-10	-1136	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCATTCTTTGCCTGTC	8756	False	NA	-20	True	NA	NA	NA	24470302	24442307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
ES.14520.75	chr17	-	2993	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	19	-1142	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	208.872484649726	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAAGGCCATTCTTTG	8694	False	NA	-26	True	NA	NA	NA	24470364	24442313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470247
ES.14520.76	chr17	-	2676	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	85	1372	-6	-1372	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCTTGCTGGCAAGTC	8760	False	NA	NA	False	NA	NA	NA	24470298	24442543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.77	chr17	-	2390	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	42	1701	-20	1059	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCGGAGTGTGTTAGCC	8717	False	NA	NA	False	NA	NA	NA	24470341	24442872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.78	chr17	-	2025	13	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	37	7642	-25	1186	5prime_fragment	FALSE	canonical	3	665	junction_12	80.241302747816	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAACAAATT	8712	False	NA	NA	False	NA	NA	NA	24470346	24448813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.79	chr17	-	2264	4	NIC	ENSMUSG00000072082.8	novel	2222	8	NA	NA	-26	-808	intron_retention	FALSE	canonical	3	665	junction_3	98.6047102773944	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGTCTTAGTGAATGT	8711	False	NA	NA	False	NA	NA	NA	24470347	24460585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24461308_24462252_24463561_24468224_24468380_24470268
ES.14520.8	chr17	-	2778	8	NIC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	18	-12	intron_retention	FALSE	canonical	3	185	junction_7	22.454489119832	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	3355	False	NA	NA	False	NA	NA	NA	24439746	24434039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24439285_24439490_24439590_24439664
ES.14520.80	chr17	-	2025	4	NIC	ENSMUSG00000072082.8	novel	2222	8	NA	NA	-5	-809	intron_retention	FALSE	canonical	3	665	junction_3	107.716706637777	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGTCTTAGTGAATG	8761	False	NA	NA	False	NA	NA	NA	24470297	24460586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.81	chr17	-	8770	2	NNC	ENSMUSG00000072082.8	novel	317	2	NA	NA	415	-810	intron_retention	FALSE	non_canonical	0	0	junction_1	0	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGTGTCTTAGTGAAT	9181	False	NA	NA	False	NA	NA	NA	24469877	24460587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24464662_24465181
ES.14520.82	chr17	-	822	4	ISM	ENSMUSG00000072082.8	ENSMUST00000234491.2	2222	8	19	4382	-10	-2017	5prime_fragment	FALSE	canonical	3	665	junction_3	107.716706637777	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAAAGATCTGCTGTCT	8756	False	NA	NA	False	AATATA	-18	NA	24470302	24461794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24462321_24463453_24463561_24468224_24468380_24470268
ES.14520.9	chr17	-	2852	8	NNC	ENSMUSG00000024118.15	novel	2160	9	NA	NA	12	-12	intron_retention	TRUE	canonical	1	2	junction_1	80.8382108073318	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	3349	False	NA	NA	False	NA	NA	NA	24439752	24434039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24434980_24435155_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24439285_24439490_24439590_24439664
ES.14521.1	chr17	-	151	1	Intergenic	novelGene_12194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	24487377	24487226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24487200_24487400
ES.14522.1	chr17	+	172	1	Intergenic	novelGene_12195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCTTCTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	24517090	24517262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24517100_24517300
ES.14523.1	chr17	+	6477	32	FSM	ENSMUSG00000024130.17	ENSMUST00000079594.12	6380	32	-97	0	-1	0	multi-exon	FALSE	canonical	3	9	junction_1	6.38937724033029	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	10	True	AATAAA	-17	NA	24570922	24629175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.10	chr17	+	5270	3	NIC	ENSMUSG00000024130.17	novel	4577	25	NA	NA	32897	2542	intron_retention	FALSE	canonical	3	33	junction_2	0.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24616352	24622685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24616564_24617308_24619064_24619381
ES.14523.11	chr17	+	4741	6	NIC	ENSMUSG00000024130.17	novel	5202	27	NA	NA	38044	-2	intron_retention	FALSE	canonical	3	22	junction_4	5.91269819963779	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTCTTTGAGTCATAC	NA	False	NA	8	True	AATAAA	-15	NA	24621499	24629173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24624128_24624218_24624414_24626531_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.12	chr17	+	1561	5	ISM	ENSMUSG00000024130.17	ENSMUST00000117337.2	5202	27	43074	-2	43074	2	3prime_fragment	FALSE	canonical	3	22	junction_3	6.49519052838329	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGAGTCATACATAT	NA	False	NA	12	True	AATAAA	-19	NA	24626529	24629177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.2	chr17	+	6534	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	-58	0	15	0	multi-exon	FALSE	canonical	3	19	junction_1	5.69230566203186	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	10	True	AATAAA	-17	NA	24570938	24629175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.3	chr17	+	6686	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	7	-217	7	217	multi-exon	FALSE	canonical	3	19	junction_1	5.69230566203186	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGCTGTGTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	24571003	24629392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.6	chr17	+	6393	33	NNC	ENSMUSG00000024130.17	novel	6476	33	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	7.35670400043389	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGTCTTTGAGTCATA	NA	False	NA	7	True	AATAAA	-14	NA	24571061	24629172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606546_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.7	chr17	+	6340	32	NNC	ENSMUSG00000024130.17	novel	6380	32	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.2204288194712	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTCTTTGAGTCATAC	NA	False	NA	8	True	AATAAA	-15	NA	24571066	24629173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585057_24585194_24585741_24585908_24593217_24593478_24595340_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611965_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14523.8	chr17	+	182	1	Intergenic	novelGene_12196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTTAAAAAATGTAT	6827	False	NA	NA	False	NA	NA	NA	24599972	24600154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24600000_24600200
ES.14523.9	chr17	+	5739	21	NIC	ENSMUSG00000024130.17	novel	6380	32	NA	NA	17480	-648	intron_retention	FALSE	canonical	3	20	junction_2	5.80064651569116	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCTGTCAGTG	7790	False	NA	NA	False	AAAACA	-25	NA	24600935	24628527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ES.14524.1	chr17	-	2535	6	NNC	ENSMUSG00000073437.11	novel	1903	7	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_1	1.16619037896906	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATATGTATGGGTTTT	7318	False	NA	NA	False	TTTAAA	-19	NA	24633401	24623621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24624313_24627780_24629146_24629231_24629328_24630898_24631058_24631440_24631549_24633285
ES.14524.2	chr17	-	1783	2	NIC	ENSMUSG00000073437.11	novel	605	3	NA	NA	7	175	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7325	False	NA	NA	False	NA	NA	NA	24633394	24631228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24632903_24633285
ES.14525.1	chr17	+	1984	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	-64	0	-35	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	849	False	NA	NA	False	AATAAA	-18	NA	24633584	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.10	chr17	+	2231	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	495	junction_1	374.654888816743	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	908	False	NA	NA	False	AATAAA	-18	NA	24633643	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.11	chr17	+	1920	6	NIC	ENSMUSG00000034681.18	novel	1646	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	629	junction_1	397.010125815451	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	908	False	NA	NA	False	AATAAA	-18	NA	24633643	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24641278_24643375_24643518_24644059
ES.14525.12	chr17	+	1744	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	19	6	-5	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	908	False	NA	NA	False	AATAAA	-18	NA	24633643	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.13	chr17	+	1810	8	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	549.861132747281	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	911	False	NA	NA	False	AATAAA	-18	NA	24633646	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637011_24637203_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.14	chr17	+	1463	6	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	634.822494875536	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	913	False	NA	NA	False	AATAAA	-18	NA	24633648	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24643375_24643518_24644059
ES.14525.15	chr17	+	1705	2	FSM	ENSMUSG00000034681.18	ENSMUST00000234729.2	1839	2	-15	149	4	19	multi-exon	FALSE	canonical	3	410	junction_1	0	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAATGAGTGCCACAGC	917	False	NA	NA	False	NA	NA	NA	24633652	24635663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24634014
ES.14525.17	chr17	+	1919	9	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	581.74672323959	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	924	False	NA	NA	False	AATAAA	-18	NA	24633659	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24634014_24634137_24637011_24637203_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.18	chr17	+	2055	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	40	-449	-8	443	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTGAGTATTGAGTCAA	924	False	NA	NA	False	NA	NA	NA	24633659	24645318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.19	chr17	+	5328	6	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1034	junction_1	237.871730140427	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	924	False	NA	NA	False	AATAAA	-18	NA	24633659	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.2	chr17	+	1683	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	-34	-3	-34	0	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	850	False	NA	NA	False	AATAAA	-21	NA	24633585	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.21	chr17	+	5311	7	NNC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	-8	0	intron_retention	TRUE	non_canonical	0	0	junction_5	585.916779263252	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	924	False	NA	NA	False	AATAAA	-21	NA	24633659	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637011_24637193_24637430_24639372_24640722_24640826_24641123_24641913_24642082_24643518_24644059
ES.14525.22	chr17	+	5093	7	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1034	junction_2	231.951623308731	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	924	False	NA	NA	False	AATAAA	-21	NA	24633659	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.23	chr17	+	2960	6	NIC	ENSMUSG00000034681.18	novel	1769	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	629	junction_1	363.434395730509	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	924	False	NA	NA	False	AATAAA	-21	NA	24633659	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637430_24637587_24639179_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.24	chr17	+	2033	7	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	75	junction_1	542.437938078327	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	925	False	NA	NA	False	AATAAA	-18	NA	24633660	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.25	chr17	+	4350	8	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-7	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	526.04527623871	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAATTGAGTGCTGGT	925	False	NA	NA	False	AATAAA	-13	NA	24633660	24644864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24635674_24636407_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.26	chr17	+	6685	6	NIC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1190	junction_1	192.585565398864	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	925	False	NA	NA	False	AATAAA	-21	NA	24633660	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24637193_24637430_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.27	chr17	+	3833	6	NNC	ENSMUSG00000034681.18	novel	1769	8	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_4	635.136331821759	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	925	False	NA	NA	False	AATAAA	-21	NA	24633660	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24641903_24642073_24643518_24644059
ES.14525.28	chr17	+	3371	7	NIC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	697	junction_1	327.995638521138	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCAAATTGAGTGCTG	926	False	NA	NA	False	AATAAA	-11	NA	24633661	24644862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637011_24637193_24637430_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.29	chr17	+	3531	7	NNC	ENSMUSG00000034681.18	novel	1646	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	591.8004778264	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	926	False	NA	NA	False	AATAAA	-18	NA	24633661	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641903_24642073_24643518_24644059
ES.14525.3	chr17	+	1865	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	-49	0	-32	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	852	False	NA	NA	False	AATAAA	-24	NA	24633587	24644875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.30	chr17	+	1875	9	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	553.495709107126	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	926	False	NA	NA	False	AATAAA	-18	NA	24633661	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24634014_24634137_24637043_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.31	chr17	+	5743	7	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	702.433389487335	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	928	False	NA	NA	False	AATAAA	-18	NA	24633663	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24635923_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641903_24642073_24643518_24644059
ES.14525.34	chr17	+	3709	8	NNC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	542.772474600245	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	932	False	NA	NA	False	AATAAA	-21	NA	24633667	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641903_24642073_24643518_24644059
ES.14525.36	chr17	+	3826	6	NNC	ENSMUSG00000034681.18	novel	1646	7	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_4	635.136331821759	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	933	False	NA	NA	False	AATAAA	-18	NA	24633668	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24641913_24642079_24643518_24644059
ES.14525.37	chr17	+	4006	7	NNC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	576.996437501038	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	933	False	NA	NA	False	AATAAA	-21	NA	24633668	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24641903_24642073_24643518_24644059
ES.14525.4	chr17	+	2058	1	FSM	ENSMUSG00000034681.18	ENSMUST00000234342.2	2106	1	67	-19	-14	19	mono-exon	FALSE	NA	NA	NA	NA	NA	558	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAATGAGTGCCACAGC	870	False	NA	NA	False	NA	NA	NA	24633605	24635663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633600_24635700
ES.14525.40	chr17	+	1873	9	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	571.286691928842	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	951	False	NA	NA	False	AATAAA	-18	NA	24633686	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641269_24643375_24643518_24644059
ES.14525.41	chr17	+	8652	5	NNC	ENSMUSG00000034681.18	novel	777	5	NA	NA	192	0	intron_retention	FALSE	non_canonical	0	0	junction_3	684.898897648405	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	1124	False	NA	NA	False	AATAAA	-21	NA	24633859	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24639372_24640722_24640826_24641123_24641913_24642082_24643518_24644059
ES.14525.42	chr17	+	4014	6	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	238	0	intron_retention	FALSE	non_canonical	0	0	junction_4	730.759331107034	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	1170	False	NA	NA	False	AATAAA	-18	NA	24633905	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24634137_24637430_24637587_24639179_24639372_24640722_24641913_24642082_24643518_24644059
ES.14525.43	chr17	+	6158	6	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	1153	0	intron_retention	FALSE	canonical	0	0	junction_4	609.27760503731	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	2085	False	NA	NA	False	AATAAA	-18	NA	24634820	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24637193_24637430_24637587_24639179_24639372_24640722_24641903_24642069_24643518_24644059
ES.14525.44	chr17	+	4105	4	NNC	ENSMUSG00000034681.18	novel	1646	7	NA	NA	-385	0	intron_retention	TRUE	non_canonical	0	0	junction_2	783.98511890639	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	5966	False	NA	NA	False	AATAAA	-18	NA	24638701	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24639372_24640722_24641908_24642077_24643518_24644059
ES.14525.5	chr17	+	3696	8	NNC	ENSMUSG00000034681.18	novel	1920	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	663.362369036005	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	887	False	NA	NA	False	AATAAA	-18	NA	24633622	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641903_24642069_24643518_24644059
ES.14525.6	chr17	+	2299	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	-10	-473	2	473	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTGGGGCAAATAGCC	891	False	NA	NA	False	AATAAA	-6	NA	24633626	24645348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.7	chr17	+	1820	8	NNC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	524.767820379758	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	901	False	NA	NA	False	AATAAA	-18	NA	24633636	24644869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24633719_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.8	chr17	+	3094	7	NIC	ENSMUSG00000034681.18	novel	1769	8	NA	NA	6	-2	intron_retention	FALSE	canonical	3	75	junction_2	570.491600873025	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTGAGTGCTGGTTTT	907	False	NA	NA	False	AATAAA	-16	NA	24633642	24644867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24640826_24641123_24641278_24643375_24643518_24644059
ES.14525.9	chr17	+	3158	7	NIC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	697	junction_1	312.463153383278	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	907	False	NA	NA	False	AATAAA	-21	NA	24633642	24644872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24640826_24641123_24641278_24643375_24643518_24644059
ES.14526.1	chr17	-	4242	2	Antisense	novelGene_ENSMUSG00000034681.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAGCCTGAAGCCAGT	7455	False	NA	NA	False	NA	NA	NA	24642835	24638423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24641910_24642079
ES.14526.2	chr17	-	3411	5	Antisense	novelGene_ENSMUSG00000034681.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAGCCTGAAGCCAGT	6095	False	NA	NA	False	NA	NA	NA	24644195	24638423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24639372_24640722_24640824_24641121_24641910_24642079_24643516_24644057
ES.14526.3	chr17	-	5058	3	Antisense	novelGene_ENSMUSG00000034681.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAGCCTGAAGCCAGT	6095	False	NA	NA	False	NA	NA	NA	24644195	24638423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24641900_24642070_24643515_24644057
ES.14526.4	chr17	-	3710	4	Antisense	novelGene_ENSMUSG00000034681.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAGCCTGAAGCCAGT	6095	False	NA	NA	False	NA	NA	NA	24644195	24638423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24639372_24640722_24641911_24642079_24643516_24644057
ES.14526.5	chr17	-	5600	2	Antisense	novelGene_ENSMUSG00000034681.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAGCCTGAAGCCAGT	6095	False	NA	NA	False	NA	NA	NA	24644195	24638423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24641909_24642080
ES.14527.1	chr17	+	1133	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	0	4	0	-4	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTCTTAGCTCTTGT	4840	False	NA	7	True	TATAAA	-20	NA	24645614	24658290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.10	chr17	+	1076	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	-18	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4893	False	NA	-24	True	NA	NA	NA	24645667	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.11	chr17	+	1882	1	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-6	-5009	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCTTTTTTTTTCCTT	4895	False	NA	NA	False	NA	NA	NA	24645669	24647551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24645700_24647600
ES.14527.12	chr17	+	1183	7	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-6	-18	intron_retention	FALSE	canonical	0	0	junction_2	259.900247958498	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4895	False	NA	-24	True	NA	NA	NA	24645669	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24645914_24651676_24651786_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.3	chr17	+	977	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	42	118	0	-18	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4882	False	NA	-24	True	NA	NA	NA	24645656	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.4	chr17	+	867	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	0	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	212.06093463908	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGCCACATATGTGC	4882	False	NA	13	True	NA	NA	NA	24645656	24658213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24645717_24645826_24645914_24652106_24652235_24656193_24656316_24656405_24656585_24657922
ES.14527.5	chr17	+	898	7	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.38635679021	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4884	False	NA	-24	True	NA	NA	NA	24645658	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24645679_24645865_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.6	chr17	+	1199	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTCTTAGCTCTTGT	4884	False	NA	7	True	TATAAA	-20	NA	24645658	24658290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14527.7	chr17	+	626	4	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	3	631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	226.651470078817	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGATGGCTGTGGCTT	4885	False	NA	NA	False	ATTAAA	-39	NA	24645659	24653191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24645717_24645826_24645914_24652106_24652235_24652837
ES.14527.8	chr17	+	735	5	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	221.42775345471	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4893	False	NA	-24	True	NA	NA	NA	24645667	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24645717_24645826_24645914_24652106_24652273_24656405_24656585_24657922
ES.14527.9	chr17	+	1073	8	NNC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	-8	-18	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	238.181460578411	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAAAAT	4893	False	NA	-24	True	NA	NA	NA	24645667	24658176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24645717_24645826_24645914_24651676_24651784_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ES.14528.1	chr17	-	3137	1	Intergenic	novelGene_12197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGGTGGTGATGCAC	7677	False	NA	NA	False	NA	NA	NA	24650871	24647734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24647700_24650900
ES.14528.2	chr17	-	251	1	Intergenic	novelGene_12198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTGAAGTGTGATC	7893	False	NA	NA	False	NA	NA	NA	24650655	24650404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24650400_24650700
ES.14529.1	chr17	+	178	1	Intergenic	novelGene_12201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGTATAATCT	NA	False	NA	NA	False	NA	NA	NA	24688081	24688259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24688100_24688300
ES.1453.1	chr1	+	1298	13	NNC	ENSMUSG00000026414.14	novel	1094	14	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.17960354715414	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATATGGAATAGTGTTT	578	False	NA	-1	True	AATAAA	-14	NA	135768397	135779996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135768655_135771515_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ES.14530.1	chr17	+	168	1	Intergenic	novelGene_12202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTATTAATAGTTAA	NA	False	NA	6	True	NA	NA	NA	24688532	24688700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24688500_24688700
ES.14531.1	chr17	+	1444	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	-299	1482	-299	-1234	multi-exon	FALSE	canonical	3	1130	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGGGGCTTAGAAATT	NA	False	NA	22	True	AATAAA	-32	NA	24689066	24690602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24690124_24690215
ES.14531.10	chr17	+	1736	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	-3	695	-3	-695	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCCTAGGTGTCT	NA	False	NA	NA	False	ACTAAA	-12	NA	24689405	24691141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24689400_24691100
ES.14531.12	chr17	+	1639	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	47	941	4	-693	multi-exon	FALSE	canonical	3	1130	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCCTAGGTGTCTTA	NA	False	NA	NA	False	ACTAAA	-14	NA	24689412	24691143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24690124_24690215
ES.14531.13	chr17	+	2424	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAAGCTGTTCCCGG	NA	False	NA	NA	False	AATAAA	-13	NA	24689412	24691836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24689400_24691800
ES.14531.2	chr17	+	2705	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	-33	-244	10	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTCTGCCTTCCTCTA	NA	False	NA	21	True	ATTAAA	-18	NA	24689375	24692080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24689400_24692100
ES.14531.3	chr17	+	2611	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	15	1	15	-1	multi-exon	FALSE	canonical	3	1130	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGCCTTCCTCTAATT	NA	False	NA	24	True	ATTAAA	-21	NA	24689380	24692083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24690124_24690215
ES.14531.4	chr17	+	4548	5	Fusion	ENSMUSG00000043445.8_ENSMUSG00000045744.12	novel	997	5	NA	NA	20	5	intron_retention	FALSE	canonical	0	0	junction_2	489.304353138208	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATTTCTGAAGCAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	24689385	24694448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_24690124_24690215_24693535_24693612_24693715_24693963_24694118_24694213
ES.14531.6	chr17	+	2349	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	35	243	-8	5	multi-exon	FALSE	canonical	3	1130	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTGTTCCCGGGCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	24689400	24691841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24690124_24690215
ES.14531.7	chr17	+	1789	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	35	803	-8	-555	multi-exon	FALSE	canonical	3	1130	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCTTACGCGTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	24689400	24691281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24690124_24690215
ES.14531.8	chr17	+	1187	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	-8	1249	-8	-1249	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTACCTAAATTAATAG	NA	False	NA	7	True	AATAAA	-17	NA	24689400	24690587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24689400_24690600
ES.14531.9	chr17	+	2549	2	NNC	ENSMUSG00000043445.8	novel	2627	2	NA	NA	-8	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTAGGTCTGCCTTCCTC	NA	False	NA	19	True	ATTAAA	-16	NA	24689400	24692078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24690584_24690712
ES.14532.1	chr17	-	2811	11	NIC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	40	0	intron_retention	FALSE	canonical	3	30	junction_4	27.0481052940867	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGATTGGGTAGA	NA	False	NA	0	True	AATAAA	-17	NA	24674220	24662751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.10	chr17	-	5244	6	ISM	ENSMUSG00000024137.10	ENSMUST00000228882.2	2226	13	1969	0	1969	0	intron_retention	FALSE	canonical	3	104	junction_4	8.2365041127896	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	2206	False	NA	-4	True	AATAAA	-13	NA	24668484	24662755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419
ES.14532.11	chr17	-	5273	8	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	30	junction_3	30.5961182011639	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	NA	False	NA	-4	True	AATAAA	-13	NA	24674272	24662755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663451_24663520_24663664_24663749_24664526_24664919_24665130_24665487_24666185_24666271_24668708_24670379_24670532_24674108
ES.14532.12	chr17	-	2619	13	FSM	ENSMUSG00000024137.10	ENSMUST00000226941.2	2642	13	100	-77	-6	-12	multi-exon	FALSE	canonical	3	73	junction_5	15.7797338380595	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAAACCTGCAGTTT	NA	False	NA	-16	True	AATAAA	-1	NA	24674266	24662767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.14	chr17	-	4956	10	NIC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	37	-18	intron_retention	FALSE	canonical	3	73	junction_5	16.5961471060434	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674223	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24666185_24666271_24668708_24670379_24670532_24674108
ES.14532.15	chr17	-	2485	13	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-6	-18	intron_retention	FALSE	canonical	1	3	junction_4	41.62422838791	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674266	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663664_24663749_24663949_24664095_24664288_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.16	chr17	-	2605	13	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-7	-18	intron_retention	FALSE	canonical	3	30	junction_5	25.7858434460117	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674267	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.17	chr17	-	2579	15	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-16	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	42.6085648188057	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	7396	False	NA	-22	True	NA	NA	NA	24689181	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24685621_24685707_24689063
ES.14532.2	chr17	-	2602	14	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_6	16.2546306556464	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674310	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.22	chr17	-	2924	10	NIC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	-6	-18	intron_retention	FALSE	canonical	3	73	junction_3	17.7144706140433	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674266	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.23	chr17	-	2814	12	NIC	ENSMUSG00000024137.10	novel	2552	14	NA	NA	-7	-18	intron_retention	FALSE	canonical	1	3	junction_4	35.0466041551805	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674267	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24664288_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.24	chr17	-	2442	7	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-2888	-18	intron_retention	FALSE	canonical	3	30	junction_2	30.4448499567478	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	4294	False	NA	-22	True	NA	NA	NA	24666396	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663664_24663749_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271
ES.14532.25	chr17	-	2852	1	NIC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	-2117	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	5065	False	NA	-22	True	NA	NA	NA	24665625	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24662800_24665600
ES.14532.26	chr17	-	4900	6	NIC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	44	-18	intron_retention	FALSE	canonical	3	73	junction_1	18.2032964047724	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674216	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24664529_24664919_24665130_24665487_24666185_24666271_24666466_24668595_24670532_24674108
ES.14532.27	chr17	-	2875	10	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	-18	intron_retention	FALSE	canonical	3	30	junction_2	36.1235875882631	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674285	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663451_24663520_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.28	chr17	-	2603	13	NNC	ENSMUSG00000024137.10	novel	2708	13	NA	NA	73	-18	intron_retention	FALSE	canonical	1	2	junction_2	33.5645108543069	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674187	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24663312_24663387_24663441_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.29	chr17	-	2828	11	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	37	-18	intron_retention	FALSE	canonical	3	30	junction_4	27.359824560841	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATAAAAAACCTG	NA	False	NA	-22	True	NA	NA	NA	24674223	24662773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663451_24663520_24663664_24663749_24663949_24664095_24664526_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.3	chr17	-	3164	9	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_1	38.7312454615134	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674276	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24664640_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.31	chr17	-	331	1	Intergenic	novelGene_12199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGTGAGAGAA	NA	False	NA	NA	False	AATAAA	-5	NA	24674898	24674567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24674600_24674900
ES.14532.32	chr17	-	160	1	Intergenic	novelGene_12200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	6586	False	NA	NA	False	NA	NA	NA	24683344	24683184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24683200_24683300
ES.14532.33	chr17	-	1907	1	Genic_Genomic	ENSMUSG00000024137.10	novel	NA	NA	NA	NA	2844	17	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTTTTTTTAAAAATG	9880	False	NA	NA	False	NA	NA	NA	24686321	24684414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_24684400_24686300
ES.14532.4	chr17	-	2747	11	NIC	ENSMUSG00000024137.10	novel	2642	13	NA	NA	37	0	intron_retention	FALSE	canonical	3	73	junction_3	16.811900546934	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674223	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.5	chr17	-	2582	14	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.3775403757178	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674272	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24663333_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.6	chr17	-	2716	13	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	30	junction_6	26.0176222331455	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674272	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.7	chr17	-	2573	14	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	36.6617353685922	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674272	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24663312_24663387_24663463_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.8	chr17	-	2494	14	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	31.9209452485688	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674298	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ES.14532.9	chr17	-	2549	13	NNC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	125	0	intron_retention	FALSE	canonical	1	2	junction_10	45.0871840622883	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674135	24662752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664288_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24666185_24666271_24666462_24668595_24668708_24670379_24670532_24674108
ES.14533.1	chr17	-	4221	7	NIC	ENSMUSG00000024142.16	novel	3855	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	68	junction_2	8.67307455417179	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCCGATTGCTTTCT	9617	False	NA	1	True	AATAAA	-18	NA	24698022	24692523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24697000_24697084_24697137_24697293
ES.14533.11	chr17	-	3876	8	FSM	ENSMUSG00000024142.16	ENSMUST00000234686.2	3855	8	-19	-2	-2	-1	multi-exon	FALSE	canonical	3	68	junction_2	8.85483840989242	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9603	False	NA	-1	True	AATAAA	-16	NA	24698036	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293
ES.14533.12	chr17	-	3443	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	60	junction_7	10.3509833901353	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9618	False	NA	-1	True	AATAAA	-16	NA	24698021	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.13	chr17	-	4136	6	NIC	ENSMUSG00000024142.16	novel	850	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	68	junction_4	9.32952303175248	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9615	False	NA	-1	True	AATAAA	-16	NA	24698024	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084
ES.14533.15	chr17	-	4061	6	NIC	ENSMUSG00000024142.16	novel	3855	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	68	junction_4	8.79545337091841	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9618	False	NA	-1	True	AATAAA	-16	NA	24698021	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697137_24697293
ES.14533.16	chr17	-	3381	10	NNC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	35.7256348810531	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9624	False	NA	-3	True	AATAAA	-14	NA	24698015	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24694926_24695019_24695184_24695298_24695424_24695865_24695947_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
ES.14533.17	chr17	-	3079	10	NNC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-2	0	intron_retention	TRUE	non_canonical	0	0	junction_1	32.104382224623	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9603	False	NA	-3	True	AATAAA	-14	NA	24698036	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24693061_24693328_24694926_24695019_24695184_24695292_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.18	chr17	-	3897	6	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_5	29.0544316757358	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9595	False	NA	-3	True	AATAAA	-14	NA	24698044	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695424_24696154_24697000_24697084_24697137_24697293_24697433_24697985
ES.14533.19	chr17	-	3683	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_7	10.3509833901353	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9618	False	NA	-3	True	AATAAA	-14	NA	24698021	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.20	chr17	-	3290	9	NNC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	26.9351072023113	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9617	False	NA	-3	True	AATAAA	-14	NA	24698022	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696873_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.21	chr17	-	3212	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234941.2	3223	9	8	3	0	0	multi-exon	FALSE	canonical	0	0	junction_8	26.8234971620033	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9618	False	NA	-3	True	AATAAA	-14	NA	24698021	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697339_24697985
ES.14533.22	chr17	-	3535	7	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_6	7.87400787401181	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAGGCCGATTGCT	9618	False	NA	-3	True	AATAAA	-14	NA	24698021	24692527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.24	chr17	-	1738	8	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	60	junction_7	10.7304639761222	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	9618	False	NA	NA	False	AATAAA	-17	NA	24698021	24694272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697453_24697985
ES.14533.25	chr17	-	1580	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	31	1747	0	2	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	9618	False	NA	NA	False	AATAAA	-16	NA	24698021	24694273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.26	chr17	-	2026	7	NIC	ENSMUSG00000024142.16	novel	3358	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	60	junction_6	11.1716406832459	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTTGCTCGGGAAGC	9623	False	NA	NA	False	AATAAA	-14	NA	24698016	24694275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.3	chr17	-	4513	4	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_1	0.471404520791032	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9618	False	NA	0	True	AATAAA	-17	NA	24698021	24692524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24695424_24696154_24696308_24696403_24697137_24697293
ES.14533.4	chr17	-	3662	8	NNC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_4	33.0386292150289	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9618	False	NA	0	True	AATAAA	-17	NA	24698021	24692524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696304_24696403_24697000_24697084_24697137_24697293_24697433_24697985
ES.14533.5	chr17	-	3367	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	-7	-2	-7	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9580	False	NA	0	True	AATAAA	-17	NA	24698059	24692524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ES.14533.6	chr17	-	3424	8	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_7	24.6717222250702	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9618	False	NA	0	True	AATAAA	-17	NA	24698021	24692524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
ES.14533.7	chr17	-	5309	3	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_2	4	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9627	False	NA	0	True	AATAAA	-17	NA	24698012	24692524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24697000_24697084
ES.14533.8	chr17	-	3312	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	27	1	-4	-1	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9614	False	NA	-1	True	AATAAA	-16	NA	24698025	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
ES.14533.9	chr17	-	3817	7	NIC	ENSMUSG00000024142.16	novel	3340	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	12	junction_6	26.5230507713992	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGCCGATTGCTTT	9623	False	NA	-1	True	AATAAA	-16	NA	24698016	24692525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24697000_24697084_24697433_24697985
ES.14534.1	chr17	-	248	1	Intergenic	novelGene_12203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATTAAAA	6177	False	NA	NA	False	NA	NA	NA	24701462	24701214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24701200_24701500
ES.14535.1	chr17	+	130	1	Intergenic	novelGene_12204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAGCCAAAAG	6220	False	NA	NA	False	NA	NA	NA	24706124	24706254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24706100_24706300
ES.14536.1	chr17	+	8550	17	NIC	ENSMUSG00000033597.10	novel	5938	20	NA	NA	-183	0	intron_retention	FALSE	canonical	2	4	junction_6	2.99413489175087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGGCTCACACTCTT	7487	False	NA	NA	False	AATAAA	-15	NA	24707391	24727645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24721201_24721290_24722914_24722993_24724995_24725496_24725912_24726090
ES.14536.2	chr17	+	6344	20	NNC	ENSMUSG00000033597.10	novel	5938	20	NA	NA	1	234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.69697038501809	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAGTAGAAAAGGTGA	7671	False	NA	NA	False	AATAAA	-16	NA	24707575	24727879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718235_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ES.14536.3	chr17	+	6115	20	FSM	ENSMUSG00000033597.10	ENSMUST00000024958.9	5938	20	-177	0	5	0	multi-exon	FALSE	canonical	1	2	junction_16	3.27755736356637	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGGCTCACACTCTT	7675	False	NA	NA	False	AATAAA	-15	NA	24707579	24727645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ES.14536.5	chr17	+	5879	18	FSM	ENSMUSG00000033597.10	ENSMUST00000234717.2	5630	18	-248	-1	26	1	multi-exon	FALSE	canonical	1	1	junction_14	3.33483241954315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCTTGGCTCACACTC	7696	False	NA	NA	False	AATAAA	-13	NA	24707600	24727643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ES.14536.6	chr17	+	5001	18	FSM	ENSMUSG00000033597.10	ENSMUST00000234717.2	5630	18	-239	868	35	-868	multi-exon	FALSE	canonical	1	1	junction_14	3.33483241954315	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGAAATATTATTG	7705	False	NA	NA	False	AATATA	-6	NA	24707609	24726774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ES.14536.7	chr17	+	6698	20	NNC	ENSMUSG00000033597.10	novel	5938	20	NA	NA	78	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.55954493029703	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGGCTCACACTCT	7748	False	NA	NA	False	AATAAA	-14	NA	24707652	24727644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720965_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ES.14537.1	chr17	+	296	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	1	1	1	0	multi-exon	TRUE	canonical	3	77	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4765	False	NA	13	True	AATAAA	-16	NA	24747222	24747717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24747411_24747609
ES.14537.2	chr17	+	493	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	-16	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4767	False	NA	13	True	AATAAA	-16	NA	24747224	24747717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24747200_24747700
ES.14538.1	chr17	-	4036	19	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-5	782	intron_retention	FALSE	canonical	0	0	junction_7	110.041981326769	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGTTTTTCTGGGG	NA	False	NA	NA	False	AATATA	-15	NA	24746890	24726753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729547_24729632_24729673_24730288_24730372_24730545_24730690_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.10	chr17	-	2722	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	-7	288	-7	0	multi-exon	FALSE	canonical	3	280	junction_18	53.1587010751768	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746919	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.11	chr17	-	3646	12	NNC	ENSMUSG00000052752.16	novel	2504	20	NA	NA	627	0	intron_retention	FALSE	canonical	0	0	junction_4	136.915006512305	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	4558	False	NA	-7	True	AATAAA	-17	NA	24733085	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729008_24729091_24729346_24729429_24729547_24729632_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166
ES.14538.13	chr17	-	2633	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	105.422530798686	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.15	chr17	-	2673	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	98.1200667549712	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.17	chr17	-	2682	21	NIC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	132.187849290319	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732088_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738087_24738221_24746739
ES.14538.18	chr17	-	2666	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	101.901373886715	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746917	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.2	chr17	-	4247	19	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-2	761	intron_retention	FALSE	canonical	3	280	junction_16	55.3879973181336	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATATTTGTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	24746797	24726774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.20	chr17	-	4268	20	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	50	junction_12	99.7003821707126	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746796	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.21	chr17	-	3235	20	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	50	junction_12	99.7881134706319	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746916	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.22	chr17	-	2639	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.506445300749	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746811	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729371_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.24	chr17	-	2678	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_17	125.337334820875	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746844	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.26	chr17	-	2786	20	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	50	junction_12	99.6878507644121	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746797	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.28	chr17	-	1719	11	NNC	ENSMUSG00000052752.16	novel	2384	19	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.429070066472	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGAGACAGCTTCTT	6158	False	NA	-8	True	AATAAA	-16	NA	24731485	24727824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24729220_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142
ES.14538.3	chr17	-	2435	20	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_16	137.482771522013	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTTCTTGGGACCAT	NA	False	NA	0	True	AATAAA	-24	NA	24746796	24727816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.30	chr17	-	2612	21	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	135.425403820701	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746796	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729565_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.31	chr17	-	2570	21	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	133.745383097885	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746826	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.34	chr17	-	2488	20	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_17	132.673740166017	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746833	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24737715_24737774_24738104_24738221_24746739
ES.14538.35	chr17	-	2488	19	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	139.801402349066	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746813	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24733098_24733192_24733686_24733804_24737715_24737774_24738104_24738221_24746739
ES.14538.36	chr17	-	2598	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_20	104.924675362853	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746834	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746776
ES.14538.38	chr17	-	4168	16	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	5	-2	intron_retention	FALSE	canonical	3	10	junction_15	125.879201353255	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	24746832	24727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729547_24729632_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746776
ES.14538.41	chr17	-	2724	21	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.568657648138	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746833	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729008_24729091_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.42	chr17	-	2542	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_17	105.40322575709	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746811	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733736_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.43	chr17	-	2920	19	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_17	135.975272352579	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746807	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ES.14538.44	chr17	-	2736	21	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_20	136.34515026212	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746934	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746776
ES.14538.45	chr17	-	2635	21	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	137.61090073101	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746807	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733677_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ES.14538.46	chr17	-	2742	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	113.871155258915	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746916	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732083_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.47	chr17	-	2934	21	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	105.866661418976	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746824	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746428
ES.14538.48	chr17	-	2576	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.815126218503	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746810	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732032_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.5	chr17	-	2656	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	31	0	4	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746833	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ES.14538.51	chr17	-	3028	22	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	157.59727946361	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24746811	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737769_24738104_24738221_24746019_24746129_24746428
ES.14538.52	chr17	-	5519	27	Fusion	ENSMUSG00000079657.11_ENSMUSG00000052752.16	novel	3003	21	NA	NA	2	0	multi-exon	FALSE	canonical	0	0	junction_4	164.509406036725	462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGTGGAGACAGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	24752698	24727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729008_24729091_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.53	chr17	-	2512	20	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	115.87465766115	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	False	NA	-13	True	AATAAA	-11	NA	24746829	24727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.54	chr17	-	2590	21	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	113.633390779295	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	False	NA	-13	True	AATAAA	-11	NA	24746793	24727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730667_24730745_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14538.55	chr17	-	2579	21	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_17	131.530034592864	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	False	NA	-13	True	AATAAA	-11	NA	24746833	24727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733736_24735478_24735571_24737715_24737774_24738087_24738221_24746739
ES.14538.56	chr17	-	2716	22	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	133.17907743586	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	False	NA	-13	True	AATAAA	-11	NA	24746796	24727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737347_24737468_24737715_24737774_24738104_24738221_24746739
ES.14538.57	chr17	-	2513	20	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.79058990284	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGTTGTGGAGACAG	NA	False	NA	-14	True	AATAAA	-10	NA	24746792	24727830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729008_24729091_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ES.14538.58	chr17	-	2606	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	131.815126218503	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTGGTTGTGGAGACA	NA	False	NA	-15	True	AATAAA	-9	NA	24746793	24727831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732083_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ES.14538.6	chr17	-	2687	21	NIC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_19	126.06485434093	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746830	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735571_24737715_24737774_24738087_24738221_24746739
ES.14538.61	chr17	-	1480	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	10	-5	intron_retention	FALSE	canonical	3	65	junction_7	8.15412753876019	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATCTGTGGAAAACCAC	NA	False	NA	-7	True	AATAAA	-18	NA	24752676	24748032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748618_24748714_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.62	chr17	-	1453	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	112	10	-50	1	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTCATCTGTGGAAA	NA	False	NA	-12	True	AATAAA	-13	NA	24752750	24748037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.63	chr17	-	1595	7	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_6	8.80656320908194	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752700	24748038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.64	chr17	-	1883	6	NIC	ENSMUSG00000079657.11	novel	1658	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	65	junction_5	8.88594395660922	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752718	24748038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748945_24749028_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.65	chr17	-	1255	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	28.0393309769091	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752630	24748038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748618_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.66	chr17	-	1465	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	4	-3	intron_retention	FALSE	canonical	3	65	junction_7	7.97700777617927	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTTGTGTCATCTGTG	NA	False	NA	-16	True	AATAAA	-9	NA	24752682	24748041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748618_24748714_24748792_24748887_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.67	chr17	-	1761	7	NIC	ENSMUSG00000079657.11	novel	1658	8	NA	NA	1	-6	intron_retention	FALSE	canonical	3	65	junction_6	8.12403840463596	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTTTGTGTCATCT	NA	False	NA	-19	True	AATAAA	-6	NA	24752699	24748044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24748618_24748714_24748945_24749028_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ES.14538.8	chr17	-	2631	21	NNC	ENSMUSG00000052752.16	novel	2667	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	134.251359397214	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746842	24727823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ES.14539.1	chr17	-	176	1	Intergenic	novelGene_12205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATACGTGAG	NA	False	NA	NA	False	NA	NA	NA	24753444	24753268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24753300_24753400
ES.1454.1	chr1	-	159	1	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATAAAAT	5876	False	NA	NA	False	NA	NA	NA	135807285	135807126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_135807100_135807300
ES.14540.1	chr17	+	175	1	Intergenic	novelGene_12206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTGTTAAAAAAA	6045	False	NA	NA	False	NA	NA	NA	24759032	24759207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_24759000_24759200
ES.14541.1	chr17	+	13953	45	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	72	-24	combination_of_known_junctions	FALSE	canonical	1	5	junction_9	8.39799636670597	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	NA	False	NA	12	True	AATAAA	-17	NA	24768995	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.10	chr17	+	6108	25	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	536	-26	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	9.43756898429534	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGTGCTGCTCTCTG	NA	False	NA	10	True	AATAAA	-15	NA	24797535	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.11	chr17	+	5353	18	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	2188	-24	intron_retention	FALSE	canonical	2	8	junction_7	6.57298655476603	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	NA	False	NA	12	True	AATAAA	-17	NA	24800321	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061
ES.14541.12	chr17	+	4415	18	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	-151	-24	intron_retention	FALSE	canonical	2	5	junction_4	9.56565366840166	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	316	False	NA	12	True	AATAAA	-17	NA	24804668	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645
ES.14541.13	chr17	+	4400	16	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	728	-29	intron_retention	FALSE	canonical	3	8	junction_1	8.8458402025409	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGCTGCTCT	1195	False	NA	7	True	AATAAA	-12	NA	24805547	24815452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.14	chr17	+	4515	10	NNC	ENSMUSG00000032855.7	novel	711	5	NA	NA	-1357	-24	intron_retention	FALSE	non_canonical	0	0	junction_1	12.0738468508499	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	4458	False	NA	12	True	AATAAA	-17	NA	24808810	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24809025_24809395_24810192_24810260_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.15	chr17	+	2669	6	NIC	ENSMUSG00000032855.7	novel	6681	31	NA	NA	1916	-24	intron_retention	FALSE	canonical	3	19	junction_2	9.93176721434811	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	7941	False	NA	12	True	AATAAA	-17	NA	24812293	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24812321_24812449_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.16	chr17	+	2923	2	NIC	ENSMUSG00000032855.7	novel	6681	31	NA	NA	2087	0	intron_retention	FALSE	canonical	3	22	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGCCAGATGTGCGTGTG	8112	False	NA	36	True	AATAAA	-41	NA	24812464	24815481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24813952_24814045
ES.14541.2	chr17	+	4329	15	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	79	4083	combination_of_known_junctions	FALSE	canonical	1	8	junction_14	3.83924418582191	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGTGTGGAACCTGA	NA	False	NA	NA	False	NA	NA	NA	24769002	24792412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787602_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591
ES.14541.3	chr17	+	4266	13	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	106	3049	intron_retention	FALSE	canonical	2	9	junction_12	3.48409082672781	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTCACTCATGCTTG	NA	False	NA	NA	False	CATAAA	-41	NA	24769029	24791378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787602_24789079_24790153_24790286_24790494_24790671_24790949
ES.14541.4	chr17	+	10918	44	NNC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	106	-24	intron_retention	FALSE	canonical	0	0	junction_11	9.08329343234877	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGCTGCTCTCTGAA	NA	False	NA	12	True	AATAAA	-17	NA	24769029	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787602_24789079_24790153_24790307_24790494_24790671_24790949_24791084_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806370_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.5	chr17	+	3769	14	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	106	3042	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	3.69070478027543	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGCTATATTCTCACTC	NA	False	NA	NA	False	CATAAA	-34	NA	24769029	24791371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787602_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949
ES.14541.6	chr17	+	4325	15	NNC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	108	4087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.09551623628909	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGGAACCTGAGATA	NA	False	NA	NA	False	NA	NA	NA	24769031	24792416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787602_24787836_24788325_24789079_24790153_24790307_24790494_24790671_24790949_24791084_24791591
ES.14541.7	chr17	+	10763	34	ISM	ENSMUSG00000032855.7	ENSMUST00000035565.5	14164	46	21690	2	3304	-1	3prime_fragment	FALSE	canonical	1	6	junction_9	9.01636100875627	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGCCAGATGTGCGTGT	NA	False	NA	35	True	AATAAA	-40	NA	24790613	24815480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.8	chr17	+	10230	31	NIC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	-3533	-27	intron_retention	FALSE	canonical	2	6	junction_7	9.10561487337468	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTCTGTGCTGCTCTCT	NA	False	NA	9	True	AATAAA	-14	NA	24791984	24815454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ES.14541.9	chr17	+	5864	28	NNC	ENSMUSG00000032855.7	novel	14164	46	NA	NA	-23	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	9.95917592902069	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTCTGTGCTGCTCTCT	NA	False	NA	9	True	AATAAA	-14	NA	24796976	24815454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813750_24814238
ES.14542.1	chr17	-	168	1	Intergenic	novelGene_12207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTATTAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	24779224	24779056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24779100_24779200
ES.14543.1	chr17	-	2930	7	Antisense	novelGene_ENSMUSG00000032855.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24812705	24808139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24809022_24809393_24809909_24809985_24810190_24810258_24810454_24810809_24810951_24811583_24812319_24812447
ES.14543.2	chr17	-	3738	1	Antisense	novelGene_ENSMUSG00000032855.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24813017	24809279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_24809300_24813000
ES.14544.1	chr17	-	6117	40	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-2	2	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_38	53.2162916926026	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGGTCCAATACTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24851578	24814787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.10	chr17	-	5643	42	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	66.8992245566567	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTATTTGACTTTGT	NA	False	NA	5	True	NA	NA	NA	24851569	24815446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.100	chr17	-	5527	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	64.6450645834622	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851591	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822219_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.101	chr17	-	5458	40	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	66.1526833529291	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851591	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.102	chr17	-	5459	41	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	72.8012319607299	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851591	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822219_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ES.14544.103	chr17	-	5539	40	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	16	junction_2	66.5989893169616	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851591	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.104	chr17	-	5460	40	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	77.8412636550575	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851578	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817298_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845416_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.105	chr17	-	5807	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	64.905888600342	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGACAGCAGTCAGACAG	NA	False	NA	-14	True	AATAAA	-40	NA	24851578	24815465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851271
ES.14544.108	chr17	-	5469	41	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	74.279859315968	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAGACAGCAGTCAGACA	NA	False	NA	-15	True	AATAAA	-39	NA	24851578	24815466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816183_24816258_24816894_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.11	chr17	-	5485	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	-6	-47	-6	-4	multi-exon	FALSE	canonical	3	88	junction_15	40.1073674085831	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTTTATTTGACTTTG	NA	False	NA	4	True	NA	NA	NA	24851610	24815447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.110	chr17	-	7937	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	-6	intron_retention	FALSE	non_canonical	0	0	junction_15	80.8512241532204	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCACAGACAGCAGTCAGA	NA	False	NA	-17	True	AATAAA	-37	NA	24851569	24815468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823628_24823799_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838542_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.112	chr17	-	6591	42	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	14	junction_9	68.1634404233749	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCACAGACAGCAGTCA	NA	False	NA	-19	True	AATAAA	-35	NA	24851558	24815470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.113	chr17	-	5592	40	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	-8	intron_retention	FALSE	canonical	3	16	junction_2	65.123107008217	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCACAGACAGCAGTCA	NA	False	NA	-19	True	AATAAA	-35	NA	24851593	24815470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.115	chr17	-	5506	39	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-2	8	intron_retention	FALSE	canonical	0	0	junction_4	67.5725525749608	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCAGAGAGCAGCACAGA	NA	False	NA	-28	True	AATAAA	-26	NA	24851578	24815479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817028_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848947_24849886_24849974_24850918_24851086_24851511
ES.14544.116	chr17	-	5423	40	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	55.5860770860111	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGAGTTCAGAGAGCAG	NA	False	NA	-34	True	AATAAA	-20	NA	24851591	24815485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840146_24840613_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.117	chr17	-	5257	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	86.2495573877599	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGGAGTTCAGAGAGCA	NA	False	NA	-35	True	AATAAA	-19	NA	24851593	24815486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822219_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845667_24845718_24846964_24847080_24847915_24848061_24849886_24849974_24850918_24851081_24851511
ES.14544.118	chr17	-	6507	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	3	1	intron_retention	FALSE	canonical	3	14	junction_9	63.8987284693522	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGGAGTTCAGAGAGCA	NA	False	NA	-35	True	AATAAA	-19	NA	24851564	24815486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ES.14544.119	chr17	-	4897	38	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	1589	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.3540962157251	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGGAGTTCAGAGAGCA	9	True	NA	-35	True	AATAAA	-19	NA	24849960	24815486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818314_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886
ES.14544.120	chr17	-	4259	30	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-7072	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	66.4444910612611	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGGAGTTCAGAGAGCA	9705	False	NA	-35	True	AATAAA	-19	NA	24840627	24815486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825366_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600
ES.14544.121	chr17	-	5441	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	7	0	intron_retention	FALSE	canonical	1	5	junction_5	69.5021323334181	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGTGGAGTTCAGAGAGC	NA	False	NA	-36	True	AATAAA	-18	NA	24851594	24815487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817298_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ES.14544.123	chr17	-	5331	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	63.3791714603465	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGTGGAGTTCAGAGAGC	NA	False	NA	-36	True	AATAAA	-18	NA	24851593	24815487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.126	chr17	-	9845	36	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	8	0	intron_retention	FALSE	canonical	1	5	junction_7	58.5160714013244	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGTGGAGTTCAGAGAGC	NA	False	NA	-36	True	AATAAA	-18	NA	24851593	24815487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818550_24819022_24819308_24819440_24820362_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.128	chr17	-	5625	18	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	71	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	70.4834025469974	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCGTGGAGTTCAGAGA	NA	False	NA	-38	True	AATAAA	-16	NA	24829541	24815489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24816112_24816183_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410
ES.14544.13	chr17	-	5427	40	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	54.0544445141112	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTTTATTTGACTTTG	NA	False	NA	4	True	NA	NA	NA	24851596	24815447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817298_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.131	chr17	-	5379	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.6576789174778	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCGTGGAGTTCAGA	NA	False	NA	-40	True	AATAAA	-14	NA	24851567	24815491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837958_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.133	chr17	-	5698	40	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_39	54.5759698874136	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCCCGTGGAGTTCAG	NA	False	NA	-41	True	AATAAA	-13	NA	24851544	24815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851187
ES.14544.135	chr17	-	5335	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.2560745307124	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCCCGTGGAGTTCAG	NA	False	NA	-41	True	AATAAA	-13	NA	24851593	24815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.136	chr17	-	6613	40	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_26	67.1450587058553	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCCCGTGGAGTTCAG	NA	False	NA	-41	True	AATAAA	-13	NA	24851570	24815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817340_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839721_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.138	chr17	-	5435	40	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	1	intron_retention	FALSE	canonical	2	8	junction_38	74.9408182017091	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24851568	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
ES.14544.140	chr17	-	5424	39	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-1	1	intron_retention	FALSE	canonical	3	16	junction_2	53.9129543634871	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24851577	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.141	chr17	-	5474	40	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-2	1	intron_retention	FALSE	canonical	2	3	junction_1	78.3406392161451	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24851578	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815915_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.142	chr17	-	5067	14	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	338	1	intron_retention	FALSE	canonical	3	195	junction_11	35.9735274133106	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24826404	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.143	chr17	-	5489	39	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_13	75.1123489078111	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24851568	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817141_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823799_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851511
ES.14544.144	chr17	-	8114	37	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	50.5005500520099	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCCCGTGGAGTTCA	NA	False	NA	-42	True	AATAAA	-12	NA	24851548	24815493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817028_24817157_24817345_24817998_24818086_24818253_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.146	chr17	-	5402	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	55.8083623396606	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24851568	24815494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847909_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.148	chr17	-	5415	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_39	66.8646206898686	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24851570	24815494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
ES.14544.149	chr17	-	5687	38	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-9	0	intron_retention	FALSE	canonical	3	88	junction_13	39.7086540900353	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24851591	24815494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.15	chr17	-	5528	41	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_39	65.6433355337768	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTTTATTTGACTT	NA	False	NA	2	True	NA	NA	NA	24851578	24815449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
ES.14544.150	chr17	-	5285	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	557	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	68.269345130517	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24850992	24815494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837924_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918
ES.14544.152	chr17	-	5412	39	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	-1	intron_retention	FALSE	canonical	2	5	junction_11	55.4278560826314	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTGGCCCGTGGAGTT	NA	False	NA	-44	True	AATAAA	-10	NA	24851569	24815495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822219_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.153	chr17	-	5618	40	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	-2	intron_retention	FALSE	canonical	3	45	junction_14	54.2311632403702	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCTGGCCCGTGGAGT	NA	False	NA	-45	True	AATAAA	-9	NA	24851593	24815496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.154	chr17	-	4238	14	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-146	-2	intron_retention	FALSE	canonical	3	195	junction_11	35.9649730980134	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCTGGCCCGTGGAGT	NA	False	NA	-45	True	AATAAA	-9	NA	24825663	24815496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.156	chr17	-	7878	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	14	junction_8	69.3964967938468	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATCTGGCCCGTGGAGT	NA	False	NA	-45	True	AATAAA	-9	NA	24851578	24815496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ES.14544.157	chr17	-	2390	21	ISM	ENSMUSG00000002496.11	ENSMUST00000227745.2	5598	42	0	13968	0	-1529	5prime_fragment	FALSE	canonical	3	184	junction_20	22.7448345784268	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGCTAACAGCATTAATAT	NA	False	NA	NA	False	NA	NA	NA	24851569	24829462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.19	chr17	-	7973	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1	junction_5	64.1520116977264	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTTCTTTATTTGAC	NA	False	NA	0	True	NA	NA	NA	24851570	24815451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817141_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.2	chr17	-	8626	40	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-3	1	intron_retention	FALSE	canonical	3	32	junction_35	61.6353830772089	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTTGGTCCAATACTG	NA	False	NA	NA	False	AATAAA	-22	NA	24851579	24814788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.21	chr17	-	5387	40	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	54.9674579480222	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACAGCTTCTTTATTT	NA	False	NA	-3	True	NA	NA	NA	24851570	24815454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822219_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.24	chr17	-	5514	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	56.8017110217641	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACAGCTTCTTTATT	NA	False	NA	-4	True	NA	NA	NA	24851578	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.25	chr17	-	3096	13	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	652	7	intron_retention	FALSE	canonical	3	195	junction_10	35.5975771647454	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACAGCTTCTTTATT	NA	False	NA	-4	True	NA	NA	NA	24823872	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.26	chr17	-	5411	40	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	8	7	combination_of_known_junctions	FALSE	canonical	2	8	junction_38	55.0508103117141	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACAGCTTCTTTATT	NA	False	NA	-4	True	NA	NA	NA	24851593	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
ES.14544.27	chr17	-	4903	15	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	410	7	intron_retention	FALSE	canonical	0	0	junction_5	76.9004458467477	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACAGCTTCTTTATT	NA	False	NA	-4	True	NA	NA	NA	24826332	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817028_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.29	chr17	-	2194	14	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-384	7	intron_retention	FALSE	canonical	3	14	junction_8	76.4213638459234	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGACAGCTTCTTTATT	NA	False	NA	-4	True	NA	NA	NA	24823513	24815455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479
ES.14544.3	chr17	-	6157	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	56.8017110217641	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGGTACTCACTTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	24851563	24814797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.30	chr17	-	5559	41	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	65.790572082936	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGACAGCTTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	24851578	24815456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851271_24851387_24851511
ES.14544.31	chr17	-	6224	39	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-1	5	intron_retention	FALSE	canonical	1	1	junction_4	62.570669188201	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGACAGCTTCTTTA	NA	False	NA	-6	True	NA	NA	NA	24851568	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817141_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.33	chr17	-	5607	38	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	5	5	intron_retention	FALSE	canonical	3	88	junction_13	38.8876375788575	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGACAGCTTCTTTA	NA	False	NA	-6	True	NA	NA	NA	24851562	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.36	chr17	-	4463	29	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-8031	5	intron_retention	FALSE	canonical	0	0	junction_9	63.2813607015913	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCAGACAGCTTCTTTA	8746	False	NA	-6	True	NA	NA	NA	24841586	24815457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819520_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498
ES.14544.37	chr17	-	5458	15	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	500	4	intron_retention	FALSE	canonical	1	5	junction_5	89.7239530733128	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAGACAGCTTCTTT	NA	False	NA	-7	True	NA	NA	NA	24826242	24815458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24816971_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.38	chr17	-	5565	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	3	4	intron_retention	FALSE	canonical	2	13	junction_32	54.4061175169548	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAGACAGCTTCTTT	NA	False	NA	-7	True	NA	NA	NA	24851564	24815458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845416_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.39	chr17	-	4722	33	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	6231	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	59.5073196653151	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAGACAGCTTCTTT	5014	False	NA	-7	True	NA	NA	NA	24845318	24815458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834625_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219
ES.14544.4	chr17	-	5888	40	FSM	ENSMUSG00000002496.11	ENSMUST00000097373.2	6018	40	12	118	-9	-118	multi-exon	FALSE	canonical	3	83	junction_15	40.6087957618561	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTATTGATGGTGGA	NA	False	NA	NA	False	AATATA	-16	NA	24851591	24815028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.41	chr17	-	5794	40	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	17	3	intron_retention	FALSE	canonical	0	0	junction_30	86.9758254593348	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGTCAGACAGCTTCTT	NA	False	NA	-8	True	NA	NA	NA	24851532	24815459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842444_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850914_24851086_24851271
ES.14544.42	chr17	-	5327	38	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	51.1503605697305	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGTCAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-45	NA	24851593	24815460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24824030_24827064_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.44	chr17	-	5077	37	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	3487	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.8732509132394	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGTCAGACAGCTTCT	2270	False	NA	-9	True	AATAAA	-45	NA	24848062	24815460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816252_24816861_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915
ES.14544.45	chr17	-	1705	9	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-1338	2	intron_retention	FALSE	canonical	3	247	junction_8	21.0590687116026	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGTCAGACAGCTTCT	NA	False	NA	-9	True	AATAAA	-45	NA	24819394	24815460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308
ES.14544.48	chr17	-	5406	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	66.001406012053	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851569	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845416_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.49	chr17	-	5455	39	NNC	ENSMUSG00000002496.11	novel	5459	40	NA	NA	0	1	intron_retention	FALSE	canonical	1	5	junction_4	62.8643011582154	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851567	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24816971_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ES.14544.5	chr17	-	5910	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	1	-119	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	56.8017110217641	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATTATTGATGGTGG	NA	False	NA	NA	False	AATATA	-15	NA	24851548	24815029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.50	chr17	-	5807	42	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	80.2208803804748	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851508	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851271
ES.14544.52	chr17	-	4167	29	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	-6195	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	81.7167207429397	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24839750	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825366_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723
ES.14544.53	chr17	-	5632	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.0613892796642	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851594	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817125_24817231_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.54	chr17	-	5525	39	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	7	1	intron_retention	FALSE	canonical	3	83	junction_14	40.886683824045	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851594	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.56	chr17	-	5472	40	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_37	72.3071558445275	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851593	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24849886_24849974_24850918_24851086_24851511
ES.14544.58	chr17	-	5420	39	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-8	1	intron_retention	FALSE	canonical	2	8	junction_37	65.3281722008391	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851590	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
ES.14544.6	chr17	-	4325	13	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	293	-119	intron_retention	FALSE	canonical	3	195	junction_10	37.3236594609312	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATTATTGATGGTGG	NA	False	NA	NA	False	AATATA	-15	NA	24825191	24815029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.60	chr17	-	5495	39	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	67.2970273429419	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851578	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840450_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.62	chr17	-	6626	40	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-2	1	intron_retention	FALSE	canonical	2	9	junction_4	56.875459408885	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851578	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816894_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.63	chr17	-	5556	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	64.972898196094	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851547	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817141_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.64	chr17	-	5332	39	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_24	56.1944400893265	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCAGTCAGACAGCTTC	NA	False	NA	-10	True	AATAAA	-44	NA	24851585	24815461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.65	chr17	-	2477	15	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.4438875686402	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24824592	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817142_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24824572
ES.14544.67	chr17	-	4010	24	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-4356	0	intron_retention	FALSE	canonical	3	45	junction_13	65.7455138377674	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24837911	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839
ES.14544.68	chr17	-	5202	37	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	3493	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	68.6255439160796	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	2276	False	NA	-11	True	AATAAA	-43	NA	24848056	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847574_24847775_24847915
ES.14544.7	chr17	-	3340	15	NNC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	180	-120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.9004458467477	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATAAATTATTGATGGTG	NA	False	NA	NA	False	AATATA	-14	NA	24824344	24815030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817028_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.72	chr17	-	7567	8	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	574	0	intron_retention	FALSE	canonical	3	221	junction_4	30.3946826713798	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24826168	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24819022_24819308_24819440_24821067_24821272_24822059_24823393_24823479_24823633_24823801
ES.14544.77	chr17	-	4999	17	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-33	0	intron_retention	FALSE	canonical	1	5	junction_6	88.9480185276772	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24826775	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817298_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24826506_24826672
ES.14544.80	chr17	-	4832	34	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	80.4524167954433	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851593	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24850918_24851086_24851511
ES.14544.84	chr17	-	5744	10	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	-3	0	intron_retention	FALSE	canonical	3	195	junction_7	33.8223390273936	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24825520	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24818086_24818253_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801
ES.14544.85	chr17	-	5333	39	NIC	ENSMUSG00000002496.11	novel	6018	40	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	56.6513673605741	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851593	24815462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.87	chr17	-	5669	42	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.838077501297	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCAGTCAGACAGCT	NA	False	NA	-12	True	AATAAA	-42	NA	24851594	24815463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24824890_24824975_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.9	chr17	-	5614	41	FSM	ENSMUSG00000002496.11	ENSMUST00000226284.2	6266	41	2	650	2	4	multi-exon	FALSE	canonical	3	45	junction_15	53.8189964139058	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGACTTTGTCTTGTCT	NA	False	NA	12	True	NA	NA	NA	24851599	24815439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.90	chr17	-	5568	40	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	5	-1	intron_retention	FALSE	canonical	2	13	junction_33	64.4751938701163	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCAGTCAGACAGCT	NA	False	NA	-12	True	AATAAA	-42	NA	24851562	24815463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24818681_24818784_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845416_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.93	chr17	-	5672	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.1711368589517	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851570	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816162_24816258_24816865_24817006_24817157_24817340_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24824890_24825088_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851507
ES.14544.94	chr17	-	5390	40	NNC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.8735177636826	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851566	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816183_24816258_24816894_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14544.99	chr17	-	5625	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16	junction_2	73.6952508646249	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGCAGTCAGACAGC	NA	False	NA	-13	True	AATAAA	-41	NA	24851548	24815464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24815741_24815828_24816038_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ES.14545.1	chr17	+	2173	5	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	194	junction_1	26.5941722939444	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTTCTTGGCCCGTT	881	False	NA	6	True	AATAAA	-18	NA	24851628	24857806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.10	chr17	+	969	6	NNC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.2189056857933	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	11	True	AATAAA	-23	NA	24851660	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24851724_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.11	chr17	+	982	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	-32	-57	5	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.13	chr17	+	3067	5	NNC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_1	125.435989652093	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTTGGCCCGTTGGC	913	False	NA	9	True	AATAAA	-21	NA	24851660	24857809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24852833_24852919_24854321_24854561_24854722_24857397_24857504_24857581
ES.14545.14	chr17	+	3385	3	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	9	-7	intron_retention	FALSE	canonical	3	232	junction_1	18.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGATTTCTTGGCCC	917	False	NA	3	True	AATAAA	-15	NA	24851664	24857803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24854722_24857397_24857504_24857581
ES.14545.15	chr17	+	4541	4	NNC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	9	0	intron_retention	FALSE	canonical	2	3	junction_2	112.963120825633	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	917	False	NA	11	True	AATAAA	-23	NA	24851664	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24851829_24852900_24853140_24853595_24857504_24857581
ES.14545.16	chr17	+	2173	6	NNC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	112.729055704375	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	921	False	NA	11	True	AATAAA	-23	NA	24851668	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24852833_24852900_24853140_24853595_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.17	chr17	+	1134	7	NNC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.864065447713	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	936	False	NA	10	True	AATAAA	-22	NA	24851683	24857810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24851829_24852748_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.2	chr17	+	1081	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	-2	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	906	False	NA	11	True	AATAAA	-23	NA	24851653	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.20	chr17	+	596	4	NNC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.807816092788	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	955	False	NA	11	True	AATAAA	-23	NA	24851702	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24851724_24852900_24853140_24857397_24857504_24857581
ES.14545.21	chr17	+	5347	1	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	763	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTGATTTCTTGGCC	1708	False	NA	2	True	AATAAA	-14	NA	24852455	24857802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24852500_24857800
ES.14545.3	chr17	+	1908	5	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	115.832853716033	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTTCTTGGCCCGTT	907	False	NA	6	True	AATAAA	-18	NA	24851654	24857806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24852833_24852900_24853140_24854561_24854722_24857397_24857504_24857581
ES.14545.4	chr17	+	2074	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	3	7	1	-7	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGATTTCTTGGCCC	909	False	NA	3	True	AATAAA	-15	NA	24851656	24857803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ES.14545.5	chr17	+	6072	2	FSM	ENSMUSG00000041429.4	ENSMUST00000234888.2	583	2	-5489	0	5	0	multi-exon	FALSE	canonical	3	269	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24857504_24857581
ES.14545.6	chr17	+	3329	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	27	junction_1	106.436209377574	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	11	True	AATAAA	-23	NA	24851660	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24852833_24852900_24854722_24857397_24857504_24857581
ES.14545.7	chr17	+	2324	4	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	202	junction_1	27.4023518860861	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24851829_24852900_24854722_24857397_24857504_24857581
ES.14545.8	chr17	+	903	5	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	913	False	NA	11	True	AATAAA	-23	NA	24851660	24857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
ES.14545.9	chr17	+	6004	3	NIC	ENSMUSG00000041429.4	novel	2084	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	27	junction_1	121	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	913	False	NA	10	True	AATAAA	-22	NA	24851660	24857810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24852833_24852900_24857504_24857581
ES.14546.2	chr17	-	1426	1	NIC	ENSMUSG00000002504.16	novel	1717	6	NA	NA	4244	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	NA	False	NA	-8	True	ATTAAA	-15	NA	24859687	24858261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24858300_24859700
ES.14546.3	chr17	-	2148	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	-14	2	-14	-2	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	5127	False	NA	-8	True	ATTAAA	-15	NA	24869315	24858261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ES.14546.5	chr17	-	1611	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	38	487	0	-3	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTTCTTACCCACCC	5179	False	NA	-3	True	AATAAA	-18	NA	24869263	24858746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ES.14547.1	chr17	-	733	2	FSM	ENSMUSG00000071230.8	ENSMUST00000095544.6	638	2	-95	0	-95	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCGTGTGACCCTTTTT	8862	False	NA	NA	False	AATAAA	-20	NA	24877526	24876303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24876479_24876968
ES.14548.1	chr17	+	3403	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	-43	-8	-43	8	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTGAGTCTCTGCCTC	1133	False	NA	20	True	AATAAA	-28	NA	24888617	24900998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.10	chr17	+	3897	11	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	229	junction_5	149.375533471851	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGCTGGTGTTCTGAG	1163	False	NA	10	True	AATAAA	-18	NA	24888647	24900988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.100	chr17	+	5516	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-1433	-1	intron_retention	FALSE	canonical	3	262	junction_4	167.492350571601	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	3323	False	NA	11	True	AATAAA	-19	NA	24894682	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24895641_24896029_24896160_24896383_24898199_24898294_24899773_24899854
ES.14548.101	chr17	+	3067	11	ISM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	6864	1	-591	-1	3prime_fragment	FALSE	canonical	3	262	junction_9	130.825685551424	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	-6	True	NA	11	True	AATAAA	-19	NA	24895524	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.102	chr17	+	3060	11	ISM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	6804	-1	-591	1	3prime_fragment	FALSE	canonical	3	229	junction_5	145.647554047433	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGTCT	-6	True	NA	13	True	AATAAA	-21	NA	24895524	24900991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.103	chr17	+	2622	9	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	462	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	196.29617291226	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGTCTC	35	False	NA	14	True	AATAAA	-22	NA	24896577	24900992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899242_24899597_24899773_24899854_24900006_24900082
ES.14548.104	chr17	+	4389	1	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	483	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	820	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	56	False	NA	9	True	AATAAA	-17	NA	24896598	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24896600_24901000
ES.14548.105	chr17	+	2233	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	837	9	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	191.185265006369	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTTGAAGTTCAATCT	334	False	NA	24	True	ATTAAA	-17	NA	24896952	24900875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24897027_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.106	chr17	+	2096	7	NNC	ENSMUSG00000041130.11	novel	3285	9	NA	NA	1480	-10	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_6	191.020068753696	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACACAAAATTGT	977	False	NA	5	True	NA	NA	NA	24897595	24900856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900218
ES.14548.107	chr17	+	2686	2	ISM	ENSMUSG00000041130.11	ENSMUST00000234988.2	3285	9	1959	10	1959	-10	intron_retention	FALSE	canonical	3	568	junction_1	0	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACACAAAATTGT	1456	False	NA	5	True	NA	NA	NA	24898074	24900856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24898199_24898294
ES.14548.11	chr17	+	3417	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	198.12109161356	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1164	False	NA	11	True	AATAAA	-19	NA	24888648	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897081_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.12	chr17	+	4117	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-10	13	intron_retention	FALSE	canonical	3	262	junction_8	119.890485006366	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGTTCAATCTTTTT	1166	False	NA	28	True	ATTAAA	-21	NA	24888650	24900879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.13	chr17	+	3339	12	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-10	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	206.590544054083	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1166	False	NA	9	True	AATAAA	-17	NA	24888650	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898493_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.14	chr17	+	3967	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	7	junction_4	200.284822190799	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1168	False	NA	11	True	AATAAA	-19	NA	24888652	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896743_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.15	chr17	+	3581	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	262	junction_9	130.98015116803	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1168	False	NA	9	True	AATAAA	-17	NA	24888652	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.16	chr17	+	4642	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	4	-1	intron_retention	FALSE	canonical	3	262	junction_6	168.031495063674	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1180	False	NA	11	True	AATAAA	-19	NA	24888664	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897688_24898010_24898199_24898294_24899773_24899854
ES.14548.17	chr17	+	4651	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	5	1	intron_retention	FALSE	canonical	3	262	junction_6	128.309574618481	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGTCT	1181	False	NA	13	True	AATAAA	-21	NA	24888665	24900991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.18	chr17	+	5053	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	5	-2	intron_retention	FALSE	canonical	3	548	junction_4	56.7934855419176	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGCTGGTGTTCTGAG	1181	False	NA	10	True	AATAAA	-18	NA	24888665	24900988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24900006_24900082
ES.14548.19	chr17	+	3228	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-55	110	5	14	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCAATCTTTTTA	1181	False	NA	29	True	ATTAAA	-22	NA	24888665	24900880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.2	chr17	+	3209	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-30	11	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	191.500987201564	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTGAAGTTCAATCTTT	1146	False	NA	26	True	ATTAAA	-19	NA	24888630	24900877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896443_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.20	chr17	+	3975	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	5	8	intron_retention	FALSE	canonical	3	262	junction_9	141.34416450461	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTGAGTCTCTGCCTC	1181	False	NA	20	True	AATAAA	-28	NA	24888665	24900998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.21	chr17	+	3157	9	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	5	3	intron_retention	FALSE	non_canonical	0	0	junction_4	217.198066289735	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCTACTTGAAGTT	1181	False	NA	18	True	ATTAAA	-11	NA	24888665	24900869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896565_24897789_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.22	chr17	+	3768	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	5	6	intron_retention	FALSE	canonical	3	13	junction_2	190.989659405948	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1181	False	NA	21	True	ATTAAA	-14	NA	24888665	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896033_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.23	chr17	+	3415	11	ISM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-54	-1	6	1	intron_retention	FALSE	canonical	3	229	junction_6	149.09942991172	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGTCT	1182	False	NA	13	True	AATAAA	-21	NA	24888666	24900991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.24	chr17	+	4636	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	262	junction_7	135.487931535752	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1183	False	NA	12	True	AATAAA	-20	NA	24888667	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899773_24899854
ES.14548.25	chr17	+	4497	9	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	9	-1	intron_retention	FALSE	canonical	3	7	junction_3	210.723604515488	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1185	False	NA	11	True	AATAAA	-19	NA	24888669	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896743_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.26	chr17	+	3393	13	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	231.820332729178	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1185	False	NA	11	True	AATAAA	-19	NA	24888669	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897390_24897442_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.27	chr17	+	4767	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	9	7	intron_retention	FALSE	canonical	3	262	junction_5	141.303161087547	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTACTTGAAGTTCAAT	1185	False	NA	22	True	ATTAAA	-15	NA	24888669	24900873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24899773_24899854_24900006_24900082
ES.14548.28	chr17	+	4955	6	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	548	junction_5	55.357023041345	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1185	False	NA	12	True	AATAAA	-20	NA	24888669	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24898199_24898294_24900006_24900082
ES.14548.29	chr17	+	3322	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	197.631471044233	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1185	False	NA	12	True	AATAAA	-20	NA	24888669	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900103
ES.14548.3	chr17	+	3365	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-76	-6	-16	6	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCTGAGTCTCTGCC	1160	False	NA	18	True	AATAAA	-26	NA	24888644	24900996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.30	chr17	+	3227	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	3	43	junction_5	190.350439978478	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGTTCTGAGTCTCT	1186	False	NA	15	True	AATAAA	-23	NA	24888670	24900993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.31	chr17	+	4092	10	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	10	16	intron_retention	FALSE	non_canonical	0	0	junction_3	207.436618313363	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTCAATCTTTTTACA	1186	False	NA	31	True	ATTAAA	-24	NA	24888670	24900882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896152_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.33	chr17	+	4328	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	10	20	intron_retention	FALSE	canonical	3	262	junction_7	124.788759008975	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAATCTTTTTACAAGAC	1186	False	NA	35	True	ATTAAA	-28	NA	24888670	24900886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.34	chr17	+	3987	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	262	junction_8	140.70992840101	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1186	False	NA	11	True	AATAAA	-19	NA	24888670	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.35	chr17	+	3418	11	ISM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	10	1	10	-1	intron_retention	FALSE	canonical	3	262	junction_10	134.209127856491	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1186	False	NA	11	True	AATAAA	-19	NA	24888670	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.36	chr17	+	4306	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	16	1	intron_retention	FALSE	canonical	3	262	junction_7	124.673009809662	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGTCT	1192	False	NA	13	True	AATAAA	-21	NA	24888676	24900991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.37	chr17	+	4866	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	16	0	intron_retention	FALSE	canonical	3	262	junction_5	139.884078992413	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1192	False	NA	12	True	AATAAA	-20	NA	24888676	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24898199_24898294_24899773_24899854_24900006_24900082
ES.14548.38	chr17	+	3251	13	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	190.253394625869	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1194	False	NA	11	True	AATAAA	-19	NA	24888678	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24898789_24898870_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.39	chr17	+	4214	10	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	19	-1	intron_retention	FALSE	canonical	3	229	junction_5	157.443777933193	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1195	False	NA	11	True	AATAAA	-19	NA	24888679	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900082
ES.14548.4	chr17	+	4842	6	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	568	junction_5	45.2345001077717	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1161	False	NA	11	True	AATAAA	-19	NA	24888645	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294
ES.14548.40	chr17	+	4448	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	19	0	intron_retention	FALSE	canonical	3	262	junction_7	146.370036209601	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1195	False	NA	12	True	AATAAA	-20	NA	24888679	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900082
ES.14548.41	chr17	+	4951	6	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	19	0	intron_retention	FALSE	canonical	3	262	junction_5	154.733835989418	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1195	False	NA	12	True	AATAAA	-20	NA	24888679	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24899773_24899854
ES.14548.42	chr17	+	4098	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	20	-1	intron_retention	FALSE	canonical	3	262	junction_8	138.020485149805	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1196	False	NA	11	True	AATAAA	-19	NA	24888680	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.43	chr17	+	3834	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	20	6	intron_retention	FALSE	canonical	3	262	junction_9	141.34416450461	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1196	False	NA	21	True	ATTAAA	-14	NA	24888680	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.44	chr17	+	3222	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	20	110	20	14	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCAATCTTTTTA	1196	False	NA	29	True	ATTAAA	-22	NA	24888680	24900880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.45	chr17	+	5052	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	20	8	intron_retention	FALSE	canonical	3	548	junction_4	61.8278861032787	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTACTTGAAGTTCAATC	1196	False	NA	23	True	ATTAAA	-16	NA	24888680	24900874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24898199_24898294_24900006_24900082
ES.14548.46	chr17	+	4261	10	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	21	-1	intron_retention	FALSE	canonical	3	7	junction_4	204.315901618844	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1197	False	NA	11	True	AATAAA	-19	NA	24888681	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896743_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.47	chr17	+	3398	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	231.458651681065	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1197	False	NA	11	True	AATAAA	-19	NA	24888681	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897764_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899765_24899854_24900006_24900082
ES.14548.48	chr17	+	4530	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	21	6	intron_retention	FALSE	canonical	3	262	junction_6	132.523236314487	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1197	False	NA	21	True	ATTAAA	-14	NA	24888681	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24899773_24899854_24900006_24900082
ES.14548.49	chr17	+	4445	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	22	57	intron_retention	FALSE	canonical	3	262	junction_6	129.895405332639	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTGCCTCTGACATTT	1198	False	NA	-55	True	NA	NA	NA	24888682	24900923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.5	chr17	+	4235	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-15	2	intron_retention	FALSE	canonical	3	262	junction_8	119.890485006366	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTGTTCTGAGTCTC	1161	False	NA	14	True	AATAAA	-22	NA	24888645	24900992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.50	chr17	+	1306	5	ISM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	23	3595	23	-3471	5prime_fragment	FALSE	canonical	3	617	junction_3	37.2458051329274	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGGTTTGGATTCTGC	1199	False	NA	NA	False	NA	NA	NA	24888683	24897395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808
ES.14548.51	chr17	+	4318	9	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	23	-1	intron_retention	FALSE	canonical	0	0	junction_6	219.461272209928	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1199	False	NA	11	True	AATAAA	-19	NA	24888683	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899697_24899773_24899854_24900006_24900082
ES.14548.53	chr17	+	4406	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	25	0	intron_retention	FALSE	canonical	3	262	junction_7	123.368350884658	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1201	False	NA	12	True	AATAAA	-20	NA	24888685	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.54	chr17	+	4522	8	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	25	6	intron_retention	FALSE	canonical	3	7	junction_3	215.440696892558	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1201	False	NA	21	True	ATTAAA	-14	NA	24888685	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896366_24896596_24896808_24898199_24898294_24898380_24898482_24900006_24900082
ES.14548.55	chr17	+	4292	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	27	-1	intron_retention	FALSE	canonical	3	262	junction_8	149.917842083589	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1203	False	NA	11	True	AATAAA	-19	NA	24888687	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899773_24899854
ES.14548.56	chr17	+	3179	12	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_11	202.861472092421	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1203	False	NA	11	True	AATAAA	-19	NA	24888687	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900218
ES.14548.57	chr17	+	3288	11	ISM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	27	114	27	10	intron_retention	FALSE	canonical	3	262	junction_10	134.209127856491	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTTGAAGTTCAATCTT	1203	False	NA	25	True	ATTAAA	-18	NA	24888687	24900876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.58	chr17	+	4538	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	27	-1	intron_retention	FALSE	canonical	3	262	junction_7	126.765962998748	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1203	False	NA	11	True	AATAAA	-19	NA	24888687	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900082
ES.14548.59	chr17	+	3741	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	27	12	intron_retention	FALSE	canonical	3	262	junction_8	149.3435113254	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAAGTTCAATCTTTT	1203	False	NA	27	True	ATTAAA	-20	NA	24888687	24900878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24899773_24899854
ES.14548.6	chr17	+	3528	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	7	junction_4	200.609695677951	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACATAGCTGGTGTTC	1162	False	NA	6	True	AATAAA	-14	NA	24888646	24900984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896743_24897027_24897569_24897688_24898010_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.60	chr17	+	4717	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	28	-1	intron_retention	FALSE	canonical	3	262	junction_6	142.941713062819	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1204	False	NA	11	True	AATAAA	-19	NA	24888688	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24899773_24899854
ES.14548.61	chr17	+	3263	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	191.500987201564	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1204	False	NA	11	True	AATAAA	-19	NA	24888688	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896443_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.63	chr17	+	4719	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	548	junction_6	51.1946177726613	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1207	False	NA	11	True	AATAAA	-19	NA	24888691	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24900006_24900082
ES.14548.64	chr17	+	3474	10	ISM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	31	6	-29	-6	intron_retention	FALSE	canonical	3	314	junction_6	107.449212809277	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACATAGCTGGTGTTC	1207	False	NA	6	True	AATAAA	-14	NA	24888691	24900984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597
ES.14548.65	chr17	+	4633	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	262	junction_6	132.523236314487	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1211	False	NA	11	True	AATAAA	-19	NA	24888695	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24899773_24899854_24900006_24900082
ES.14548.66	chr17	+	3225	13	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	196.222167169994	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1212	False	NA	11	True	AATAAA	-19	NA	24888696	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24898790_24898870_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.67	chr17	+	4509	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-24	0	intron_retention	FALSE	canonical	3	262	junction_6	131.284859316352	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1212	False	NA	12	True	AATAAA	-20	NA	24888696	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.68	chr17	+	3103	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	195.742586066497	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1212	False	NA	11	True	AATAAA	-19	NA	24888696	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.69	chr17	+	2917	12	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	206.016889302033	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1212	False	NA	11	True	AATAAA	-19	NA	24888696	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24898941_24899677_24899773_24899854_24900006_24900082
ES.14548.7	chr17	+	3351	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-14	6	intron_retention	FALSE	canonical	3	262	junction_9	133.712976184064	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1162	False	NA	21	True	ATTAAA	-14	NA	24888646	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.70	chr17	+	4403	8	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	7	junction_4	213.647525860054	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1214	False	NA	11	True	AATAAA	-19	NA	24888698	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896743_24898199_24898294_24898380_24898482_24899250_24899597
ES.14548.71	chr17	+	2535	11	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	216.01981390604	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1214	False	NA	9	True	AATAAA	-17	NA	24888698	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24899597_24899773_24899854_24900006_24900082
ES.14548.72	chr17	+	3359	12	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	205.954700948959	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1214	False	NA	12	True	AATAAA	-20	NA	24888698	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897081_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.74	chr17	+	3266	11	ISM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	-21	115	-21	9	intron_retention	FALSE	canonical	3	229	junction_6	149.09942991172	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTTGAAGTTCAATCT	1215	False	NA	24	True	ATTAAA	-17	NA	24888699	24900875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.75	chr17	+	2934	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-19	6	intron_retention	FALSE	canonical	0	0	junction_4	217.198066289735	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTACTTGAAGTTCAA	1217	False	NA	21	True	ATTAAA	-14	NA	24888701	24900872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
ES.14548.76	chr17	+	5010	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	568	junction_4	50.1117501191088	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1217	False	NA	11	True	AATAAA	-19	NA	24888701	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294
ES.14548.78	chr17	+	4995	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	568	junction_4	50.5024751868658	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1222	False	NA	12	True	AATAAA	-20	NA	24888706	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24898199_24898294
ES.14548.79	chr17	+	3942	10	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_7	215.963874436741	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1222	False	NA	11	True	AATAAA	-19	NA	24888706	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898461_24899250_24899597_24900006_24900082
ES.14548.8	chr17	+	3908	11	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	262	junction_9	134.256470979987	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1163	False	NA	12	True	AATAAA	-20	NA	24888647	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.80	chr17	+	4556	8	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	7	junction_3	225.131616833263	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACATAGCTGGTGTTCTG	1226	False	NA	8	True	AATAAA	-16	NA	24888710	24900986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896743_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.81	chr17	+	3358	11	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_10	204.173357713488	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1226	False	NA	11	True	AATAAA	-19	NA	24888710	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899865
ES.14548.82	chr17	+	4392	9	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	262	junction_7	124.788759008975	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1226	False	NA	12	True	AATAAA	-20	NA	24888710	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.83	chr17	+	3164	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_11	195.015278062222	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1227	False	NA	11	True	AATAAA	-19	NA	24888711	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900218
ES.14548.85	chr17	+	4591	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	485	junction_6	65.8569879142894	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1230	False	NA	9	True	AATAAA	-17	NA	24888714	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24900006_24900082
ES.14548.86	chr17	+	4178	10	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	7	junction_3	205.62857561903	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1230	False	NA	9	True	AATAAA	-17	NA	24888714	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896366_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.87	chr17	+	3848	11	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	7	junction_3	209.540091629263	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1230	False	NA	11	True	AATAAA	-19	NA	24888714	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896366_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.88	chr17	+	4214	8	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	229	junction_4	143.445075885924	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1230	False	NA	11	True	AATAAA	-19	NA	24888714	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597
ES.14548.9	chr17	+	5175	5	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	485	junction_4	80.8919031794901	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1163	False	NA	12	True	AATAAA	-20	NA	24888647	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24898199_24898294_24898380_24898482
ES.14548.91	chr17	+	3575	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_4	202.775861482574	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1231	False	NA	12	True	AATAAA	-20	NA	24888715	24900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24897081_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.92	chr17	+	3193	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	235.707636702759	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1233	False	NA	11	True	AATAAA	-19	NA	24888717	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896366_24896596_24896808_24897027_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.93	chr17	+	5022	6	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	262	junction_5	151.581793101942	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1233	False	NA	11	True	AATAAA	-19	NA	24888717	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24898199_24898294_24898380_24898482_24899773_24899854
ES.14548.94	chr17	+	3230	12	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	235.550349059705	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1234	False	NA	11	True	AATAAA	-19	NA	24888718	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24896960_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899777_24899854_24900006_24900082
ES.14548.95	chr17	+	4086	9	NNC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	7	junction_3	258.457896716274	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1237	False	NA	11	True	AATAAA	-19	NA	24888721	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896366_24896596_24896743_24897679_24898010_24898199_24898294_24899250_24899597_24899773_24899854
ES.14548.96	chr17	+	4088	10	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	1	-10	intron_retention	FALSE	canonical	3	7	junction_4	204.315901618844	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACACAAAATTGT	1237	False	NA	5	True	NA	NA	NA	24888721	24900856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896743_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ES.14548.97	chr17	+	4440	7	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	4	-1	intron_retention	FALSE	canonical	3	314	junction_5	124.514613153994	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCTGGTGTTCTGAGT	1240	False	NA	11	True	AATAAA	-19	NA	24888724	24900989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294
ES.14548.98	chr17	+	4540	8	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	78	-2	intron_retention	FALSE	canonical	3	262	junction_6	149.195803409821	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGCTGGTGTTCTGAG	1314	False	NA	10	True	AATAAA	-18	NA	24888798	24900988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24888948_24895527_24895641_24896029_24897688_24898010_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900082
ES.14548.99	chr17	+	4078	10	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	81	-3	intron_retention	FALSE	canonical	0	0	junction_9	217.465251942624	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATAGCTGGTGTTCTGA	1317	False	NA	9	True	AATAAA	-17	NA	24888801	24900987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900103
ES.14549.1	chr17	-	1672	1	NIC	ENSMUSG00000007021.6	novel	1836	4	NA	NA	1434	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAAGGTCCCCTGGACT	NA	False	NA	-3	True	AATAAA	-21	NA	24905739	24904067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24904100_24905700
ES.14549.2	chr17	-	1929	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	30	6	30	-6	multi-exon	FALSE	canonical	3	8	junction_2	5.18544972870135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCAGTAAGGTCCCCTG	NA	False	NA	-7	True	AATAAA	-17	NA	24908899	24904071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
ES.1455.1	chr1	+	981	3	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATTTCATATAAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	135862323	135865044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_135862523_135863505_135863772_135864528
ES.14550.1	chr17	+	1423	9	NNC	ENSMUSG00000019320.15	novel	1568	7	NA	NA	-526	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.66571957465379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACTGTGCACTGAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	24914681	24919501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24914760_24917193_24917383_24917491_24917573_24917759_24917836_24917918_24918097_24918242_24918425_24918517_24918632_24918871_24918990_24919094
ES.14550.2	chr17	+	2246	9	FSM	ENSMUSG00000019320.15	ENSMUST00000019464.8	2238	9	-10	2	-10	2	multi-exon	FALSE	canonical	1	4	junction_2	2.89125837655509	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACTGTGCACTGAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	24915197	24919501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24916099_24917193_24917383_24917491_24917573_24917759_24917836_24917918_24918097_24918242_24918425_24918517_24918632_24918871_24918990_24919094
ES.14551.1	chr17	-	1240	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	-14	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.584843634779	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTTTGTGTTTGG	NA	False	NA	0	True	AATAAA	-24	NA	24915144	24912153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24912587_24913146_24913417_24914227_24914425_24914804
ES.14551.10	chr17	-	1140	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-372	1008	-372	-13	multi-exon	FALSE	canonical	3	527	junction_2	47.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTTTCTGTAGTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	24915502	24913171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24913417_24914227_24914425_24914804
ES.14551.12	chr17	-	697	4	NNC	ENSMUSG00000040888.11	novel	1776	3	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.584843634779	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTTTCTGTAGTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	24915132	24913171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24913417_24914227_24914425_24914804_24914876_24914948
ES.14551.13	chr17	-	669	3	FSM	ENSMUSG00000040888.11	ENSMUST00000234235.2	682	3	-2	15	1	-15	multi-exon	FALSE	canonical	3	24	junction_2	299	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACACTTGTTTCTGTAGT	NA	False	NA	-9	True	ATTAAA	-12	NA	24915066	24913173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24913417_24914227_24914392_24914804
ES.14551.3	chr17	-	2338	2	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	24915060	24912162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24912587_24913146
ES.14551.4	chr17	-	2072	3	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	-475	1	intron_retention	FALSE	non_canonical	0	0	junction_1	311	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGGTTTCTGTGTGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	24915605	24912162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24912587_24913146_24913417_24914227
ES.14551.5	chr17	-	1148	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	273.584843634779	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGCTGGTTTCTGTGTGC	NA	False	NA	-11	True	AATAAA	-13	NA	24915064	24912164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24912581_24913141_24913417_24914227_24914425_24914804
ES.14551.7	chr17	-	1176	4	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	287.723632829993	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGCTGGTTTCTGTGTGC	NA	False	NA	-11	True	AATAAA	-13	NA	24915124	24912164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24912587_24913146_24913417_24914227_24914392_24914804
ES.14551.8	chr17	-	993	3	NIC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGCTGGTTTCTGTGTG	NA	False	NA	-12	True	AATAAA	-12	NA	24915101	24912165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24912587_24913141_24913417_24914804
ES.14552.1	chr17	-	2798	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	36	2392	7	117	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTTGTTCCTGTCCCA	NA	False	NA	NA	False	AATACA	-20	NA	24926598	24919314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.14	chr17	-	2743	19	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	8	-195	intron_retention	FALSE	canonical	3	500	junction_11	41.46681701771	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCTCATGTGAA	NA	False	NA	-26	True	NA	NA	NA	24926597	24919626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24921022_24921118_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.15	chr17	-	2576	21	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	-3	-195	intron_retention	FALSE	canonical	3	500	junction_13	39.931034296647	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCTCATGTGAA	NA	False	NA	-26	True	NA	NA	NA	24926608	24919626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.18	chr17	-	2524	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	-7	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	129.345097297931	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTTCTCATGTGAA	NA	False	NA	-26	True	NA	NA	NA	24926612	24919626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921622_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.19	chr17	-	2383	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	-6	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.594203560082	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926611	24919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921235_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.20	chr17	-	2523	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	-6	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.594203560082	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926611	24919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921375_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.21	chr17	-	2462	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	8	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	129.573134865649	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926597	24919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923230_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.22	chr17	-	2584	21	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	8	-196	intron_retention	FALSE	canonical	3	500	junction_13	41.3413836246442	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926597	24919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.25	chr17	-	2475	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	8	-196	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_20	125.904149555459	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926597	24919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24924996_24925088_24925141_24926497
ES.14552.28	chr17	-	3893	5	NIC	ENSMUSG00000040688.17	novel	2767	21	NA	NA	8	1250	intron_retention	FALSE	canonical	3	540	junction_1	18.5522909636519	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGACTCATCATCTCTCT	NA	False	NA	NA	False	AAGAAA	-2	NA	24926597	24922355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24923252_24923340_24923523_24923605_24924456_24924538_24924681_24924774
ES.14552.29	chr17	-	3971	1	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	2	973	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGGGGGGAGGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	24926603	24922632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24922600_24926600
ES.14552.3	chr17	-	2696	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	7	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	129.552202770275	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTGCTTTCTTGGTGA	NA	False	NA	0	True	AATAGA	-45	NA	24926598	24919420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920946_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.30	chr17	-	2430	4	NIC	ENSMUSG00000040688.17	novel	2767	21	NA	NA	8	967	intron_retention	FALSE	canonical	3	540	junction_1	44.1588043316392	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAACCCGTGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	24926597	24922638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24923252_24923340_24924456_24924538_24925141_24926497
ES.14552.31	chr17	-	2690	1	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	7	-303	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGCCAAGGCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	24926598	24923908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24923900_24926600
ES.14552.32	chr17	-	2325	5	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	2	-341	intron_retention	FALSE	canonical	3	536	junction_1	43.0196176180124	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24926603	24923946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24924292_24924370_24924456_24924538_24924823_24924908_24925005_24925088
ES.14552.5	chr17	-	2539	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	7	2680	7	-171	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCTCTCCCAAAGTCC	NA	False	NA	-2	True	NA	NA	NA	24926627	24919602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14552.6	chr17	-	2498	22	NNC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	-6	-188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	128.922237455986	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCATGTGAATCTGATC	NA	False	NA	-19	True	NA	NA	NA	24926611	24919619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920584_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ES.14553.1	chr17	+	1011	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	-13	0	-13	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTTTTTTTTTGTCTG	6177	False	NA	1	True	AATAAA	-20	NA	24939023	24940900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ES.14553.11	chr17	+	1505	4	NIC	ENSMUSG00000044533.16	novel	998	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	3280	junction_1	3189.96931368034	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTTTTTTTTGTC	6238	False	NA	-1	True	AATAAA	-18	NA	24939084	24940898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24939107_24939246_24939427_24939507_24940689_24940776
ES.14553.12	chr17	+	1724	2	FSM	ENSMUSG00000077709.3_ENSMUSG00000044533.16	ENSMUST00000132803.2	389	2	-1336	1	3	-1	multi-exon	FALSE	canonical	3	10975	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTTTTTTTTGTC	6240	False	NA	-1	True	AATAAA	-18	NA	24939086	24940898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24940689_24940776
ES.14553.13	chr17	+	950	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4108.09673693305	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATTATGTTTTTTTTT	6240	False	NA	-4	True	AATAAA	-15	NA	24939086	24940895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24939107_24939239_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ES.14553.14	chr17	+	1314	4	NIC	ENSMUSG00000044533.16	novel	1094	5	NA	NA	13	0	intron_retention	FALSE	canonical	3	8303	junction_1	1277.14690706364	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6250	False	NA	0	True	AATAAA	-19	NA	24939096	24940899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24939427_24939507_24940277_24940596_24940689_24940776
ES.14553.2	chr17	+	944	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4114.97385653907	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTATGTTTTTTTTTGT	6235	False	NA	-2	True	AATAAA	-17	NA	24939081	24940897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940271_24940596_24940689_24940776
ES.14553.3	chr17	+	1091	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	-1	4	-1	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6236	False	NA	0	True	AATAAA	-19	NA	24939082	24940899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ES.14553.4	chr17	+	1815	1	FSM	ENSMUSG00000077709.3	ENSMUST00000104521.3	134	1	-662	-1019	-662	1019	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTTTTTTTTGTC	6237	False	NA	-1	True	AATAAA	-18	NA	24939083	24940898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24939100_24940900
ES.14553.5	chr17	+	774	6	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	412	junction_3	4264.55196239886	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTATGTTTTTTTTTGT	6237	False	NA	-2	True	AATAAA	-17	NA	24939083	24940897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24939107_24939246_24939427_24939507_24939706_24940116_24940277_24940596_24940689_24940776
ES.14553.6	chr17	+	1408	3	FSM	ENSMUSG00000044533.16	ENSMUST00000129580.2	637	3	-713	-58	0	0	multi-exon	FALSE	canonical	3	10975	junction_2	36.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGTTTTTTTTTGTCT	6237	False	NA	0	True	AATAAA	-19	NA	24939083	24940899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24940277_24940596_24940689_24940776
ES.14553.7	chr17	+	1276	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	47	-325	0	322	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTAAATGAGCTTGG	6237	False	NA	NA	False	NA	NA	NA	24939083	24941225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ES.14553.8	chr17	+	890	7	NNC	ENSMUSG00000044533.16	novel	998	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4135.74851817123	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATTATGTTTTTTTTT	6237	False	NA	-4	True	AATAAA	-15	NA	24939083	24940895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24939107_24939246_24939427_24939507_24939614_24939669_24939706_24939942_24940277_24940596_24940689_24940776
ES.14553.9	chr17	+	2840	2	FSM	ENSMUSG00000077709.3_ENSMUSG00000044533.16	ENSMUST00000132803.2	389	2	-1339	-1112	0	1108	multi-exon	FALSE	canonical	3	10975	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACCAAACCCAAAAATA	6237	False	NA	NA	False	NA	NA	NA	24939083	24942011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24940689_24940776
ES.14554.1	chr17	-	2653	3	Fusion	ENSMUSG00000040048.15_ENSMUSG00000090101.2	novel	732	4	NA	NA	3	10	intron_retention	FALSE	canonical	1	1	junction_2	107	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGTTTTTTGGTTTTG	NA	False	NA	2	True	AATAAA	-25	NA	24943365	24938494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_24938582_24938833_24941195_24943160
ES.14554.2	chr17	-	371	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	-100	-143	-100	143	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATCGTATGTTGGTGT	4363	False	NA	-10	True	AATAAA	-13	NA	24938877	24938506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24938500_24938900
ES.14554.3	chr17	-	732	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	-3	3	-3	-3	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTCTGGTGACT	NA	False	NA	NA	False	AATAAA	-19	NA	24943455	24941036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ES.14554.5	chr17	-	2325	1	NIC	ENSMUSG00000040048.15	novel	834	3	NA	NA	7	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTCTGGTGACT	NA	False	NA	NA	False	AATAAA	-19	NA	24943361	24941036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_24941000_24943400
ES.14554.6	chr17	-	519	4	NNC	ENSMUSG00000040048.15	novel	732	4	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	1010.95202655715	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTCTGGTGACT	NA	False	NA	NA	False	AATAAA	-19	NA	24943416	24941036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24941195_24941354_24941495_24941628_24941768_24943334
ES.14554.7	chr17	-	2029	3	FSM	ENSMUSG00000040048.15	ENSMUST00000144285.2	553	3	-1480	4	8	-4	multi-exon	FALSE	canonical	3	2001	junction_1	144	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTTTCTGGTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	24943360	24941037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_24941195_24941354_24941495_24941628
ES.14554.8	chr17	-	643	4	NNC	ENSMUSG00000040048.15	novel	732	4	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	1016.57070585375	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACATAAACTGTGTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	24943358	24941044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_24941195_24941354_24941495_24941628_24941784_24943160
ES.14555.1	chr17	-	212	1	Intergenic	novelGene_12208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTTTTTAATTAAA	NA	False	NA	0	True	NA	NA	NA	24945146	24944934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24944900_24945100
ES.14556.1	chr17	+	1292	9	ISM	ENSMUSG00000002500.16	ENSMUST00000170239.9	1375	10	515	-2	161	2	3prime_fragment	FALSE	canonical	3	9	junction_2	2.8613807855649	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTCTGTGTGTCTG	NA	False	NA	20	True	AATAAA	-20	NA	24947308	24955119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_24947484_24949842_24950012_24951309_24951446_24952282_24952470_24952557_24952719_24952890_24952993_24954390_24954487_24954695_24954816_24954973
ES.14557.1	chr17	+	902	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	-17	1	-17	-1	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTGTTTGTTGTCTCAT	NA	False	NA	18	True	AATAAA	-18	NA	24955598	24961751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
ES.14557.2	chr17	+	1265	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	-47	-7	-7	0	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	False	NA	19	True	AATAAA	-19	NA	24955608	24961752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
ES.14557.3	chr17	+	873	4	NNC	ENSMUSG00000075705.14	novel	1211	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.934695568042	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGTTTCCGTGTTTGTTG	NA	False	NA	12	True	AATAAA	-12	NA	24955626	24961745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_24955737_24958472_24958622_24959053_24959173_24961250
ES.14557.4	chr17	+	3827	1	NIC	ENSMUSG00000075705.14	novel	886	5	NA	NA	320	-1943	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGACCTTTTTAGTGGTA	NA	False	NA	NA	False	AGTAAA	-8	NA	24955975	24959802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_24956000_24959800
ES.14558.1	chr17	+	1228	2	FSM	ENSMUSG00000039628.10	ENSMUST00000044922.8	1220	2	-9	1	6	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGACTTGAAGGTGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	24971967	24977657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_24972473_24976934
ES.14559.1	chr17	-	192	1	Intergenic	novelGene_12209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAG	1179	False	NA	NA	False	NA	NA	NA	24996687	24996495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_24996500_24996700
ES.1456.1	chr1	+	1448	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	42	316	42	246	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945746	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.1456.10	chr1	+	1536	6	NNC	ENSMUSG00000026411.18	novel	847	6	NA	NA	12	244	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	205.852957229183	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGTTGCAGATCTCAA	NA	False	NA	18	True	ATTAAA	-13	NA	135945811	135962762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952434_135955134_135955267_135961805
ES.1456.11	chr1	+	1712	7	NNC	ENSMUSG00000026411.18	novel	847	6	NA	NA	14	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	213.35839696519	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945813	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952465_135952828_135952974_135955134_135955267_135961805
ES.1456.12	chr1	+	1541	6	NNC	ENSMUSG00000026411.18	novel	847	6	NA	NA	146	244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.560722324925	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGTTGCAGATCTCAA	NA	False	NA	18	True	ATTAAA	-13	NA	135945945	135962762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135946095_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.1456.13	chr1	+	1397	5	ISM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	536	316	441	246	3prime_fragment	FALSE	canonical	3	407	junction_3	14.0066948278314	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135946240	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.1456.14	chr1	+	5372	3	ISM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	2481	314	2386	248	3prime_fragment	FALSE	canonical	3	407	junction_1	7	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	22	True	ATTAAA	-17	NA	135948185	135962766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_135952465_135955134_135955267_135961805
ES.1456.2	chr1	+	1298	5	NIC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	-39	242	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	177.433614346324	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGAGTTGCAGATCTC	NA	False	NA	16	True	ATTAAA	-11	NA	135945760	135962760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135961805
ES.1456.3	chr1	+	3872	6	NNC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	-28	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	167.278689617058	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945771	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135952685_135955267_135961805
ES.1456.4	chr1	+	1086	7	NNC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	-28	246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	155.939803200537	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945771	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805_135962128_135962464
ES.1456.5	chr1	+	757	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	67	982	-28	-39	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGGAGTGTGATTGGGTC	NA	False	NA	14	True	NA	NA	NA	135945771	135962098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.1456.6	chr1	+	1728	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	72	6	-23	-6	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATGTCTAAGCAAAAC	NA	False	NA	NA	False	ATTAAA	-12	NA	135945776	135963074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.1456.7	chr1	+	3541	6	NNC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	-23	248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	167.278689617058	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCAGATCTCAAGGGA	NA	False	NA	22	True	ATTAAA	-17	NA	135945776	135962766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135954586_135955134_135955267_135961805
ES.1456.8	chr1	+	1810	5	NNC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	-5	244	intron_retention	FALSE	canonical	1	8	junction_3	183.540867383806	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGTTGCAGATCTCAA	NA	False	NA	18	True	ATTAAA	-13	NA	135945794	135962762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_135946346_135947395_135947488_135952355_135952434_135955134_135955267_135961805
ES.1456.9	chr1	+	1576	6	FSM	ENSMUSG00000026411.18	ENSMUST00000117950.2	847	6	5	-734	5	246	multi-exon	FALSE	canonical	2	15	junction_1	164.577519728546	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945804	135962764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ES.14560.1	chr17	+	176	1	Intergenic	novelGene_12210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTTCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	25006531	25006707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25006500_25006700
ES.14561.1	chr17	+	2389	11	ISM	ENSMUSG00000024155.9	ENSMUST00000234372.2	1665	13	4	3436	4	-3435	5prime_fragment	FALSE	canonical	0	0	junction_3	0.8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCAAGTGTTTCACAG	6682	False	NA	NA	False	AGTAAA	-12	NA	25023266	25055326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25023387_25031977_25032056_25035505_25035564_25038845_25038919_25042505_25042702_25046905_25047007_25047925_25047979_25048063_25048160_25051398_25051498_25052868_25053023_25053965
ES.14561.2	chr17	+	1658	13	FSM	ENSMUSG00000024155.9	ENSMUST00000234372.2	1665	13	6	1	6	0	multi-exon	FALSE	canonical	0	0	junction_3	0.862006702732383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGAATGATTTCTTTG	6684	False	NA	NA	False	AATAAA	-20	NA	25023268	25058761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25023387_25031977_25032056_25035505_25035564_25038845_25038919_25042505_25042702_25046905_25047007_25047925_25047979_25048063_25048160_25051398_25051498_25052868_25053023_25053965_25054150_25055409_25055497_25058400
ES.14562.1	chr17	-	195	1	Intergenic	novelGene_12211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	25034285	25034090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25034100_25034300
ES.14563.1	chr17	-	176	1	Intergenic	novelGene_12212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCAGAGTGAGCGGGGC	NA	False	NA	NA	False	NA	NA	NA	25057641	25057465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25057500_25057600
ES.14564.1	chr17	+	1121	9	NNC	ENSMUSG00000024158.18	novel	861	8	NA	NA	-392	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	121.179360866445	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCTTATGGACTCT	NA	False	NA	9	True	AAAAAG	-22	NA	25069071	25083422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25069183_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ES.14564.2	chr17	+	1559	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	-370	2	-370	-2	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCTTATGGACTCT	NA	False	NA	9	True	AAAAAG	-22	NA	25069093	25083422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ES.14564.3	chr17	+	4082	8	NIC	ENSMUSG00000024158.18	novel	1191	9	NA	NA	-39	1	intron_retention	FALSE	canonical	3	330	junction_5	26.7154316026203	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTGCTTATGGACTC	NA	False	NA	8	True	AAAAAG	-21	NA	25069510	25083421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25069643_25071704_25071881_25072605_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ES.14564.4	chr17	+	4347	9	NNC	ENSMUSG00000024158.18	novel	1191	9	NA	NA	-9	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	128.566070076829	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCTTATGGACTCT	NA	False	NA	9	True	AAAAAG	-22	NA	25069540	25083422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25078330_25078415_25080024_25080286_25080389_25082650_25082731_25083166
ES.14564.5	chr17	+	1100	9	NNC	ENSMUSG00000024158.18	novel	1191	9	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	130.080503919688	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCTTATGGACTCT	NA	False	NA	9	True	AAAAAG	-22	NA	25069541	25083422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25069643_25071704_25071881_25072605_25072671_25075622_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ES.14565.1	chr17	+	1358	2	Genic_Genomic	ENSMUSG00000046070.10	novel	1287	3	NA	NA	-5759	-3556	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGGGA	1414	False	NA	NA	False	NA	NA	NA	25090870	25095681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_25091100_25094552
ES.14566.1	chr17	+	2146	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234862.2	995	2	179	-1330	179	0	multi-exon	FALSE	canonical	1	3	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7352	False	NA	9	True	ATTAAA	-16	NA	25096808	25100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25096897_25098926
ES.14566.2	chr17	+	2231	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234188.2	500	2	16	-1747	16	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7748	False	NA	9	True	ATTAAA	-16	NA	25097204	25100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25097378_25098926
ES.14566.3	chr17	+	3769	1	Genic_Genomic	ENSMUSG00000046070.10	novel	NA	NA	NA	NA	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7759	False	NA	9	True	ATTAAA	-16	NA	25097215	25100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_25097200_25101000
ES.14566.4	chr17	+	2640	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	-15	0	-15	0	multi-exon	FALSE	canonical	3	22	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7760	False	NA	9	True	ATTAAA	-16	NA	25097216	25100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25097799_25098926
ES.14566.5	chr17	+	2101	2	NNC	ENSMUSG00000046070.10	novel	2625	2	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	8133	False	NA	9	True	ATTAAA	-16	NA	25097589	25100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25097799_25099092
ES.14566.6	chr17	+	2187	2	FSM	ENSMUSG00000046070.10	ENSMUST00000234754.2	2064	2	-131	8	-131	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATAGCTTGTGACCT	8143	False	NA	1	True	ATTAAA	-8	NA	25097599	25100976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25097799_25098988
ES.14567.1	chr17	-	4848	2	Genic_Genomic	ENSMUSG00000045316.6	novel	1473	1	NA	NA	249	3684	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTATTTTGGTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	25069089	25064181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_25065491_25065550
ES.14567.2	chr17	-	1405	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	64	4	64	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCACTTTCTTTTCC	NA	False	NA	-1	True	AATAAA	-20	NA	25069274	25067869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25067900_25069300
ES.14568.1	chr17	-	5473	6	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_5	1.16619037896906	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGGAATAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	25098162	25081430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086378_25086486_25086600_25091026_25091101_25094553_25094653_25096077_25096186_25098030
ES.14568.2	chr17	-	3865	5	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	2.1650635094611	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCGCACACTTCAGGAT	NA	False	NA	NA	False	AATAAA	-18	NA	25100857	25082839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086378_25086486_25086600_25091026_25091101_25094553_25094653_25100816
ES.14568.4	chr17	-	6041	2	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCATTAGAACATTTG	NA	False	NA	NA	False	AATAAA	-26	NA	25089536	25083386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086378_25086486
ES.14568.5	chr17	-	3414	6	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_5	0.8	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATGCATTAGAACAT	NA	False	NA	NA	False	AATAAA	-23	NA	25097493	25083389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086378_25086486_25086600_25091026_25091101_25094553_25094653_25096077_25096186_25097461
ES.14568.6	chr17	-	3485	6	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_4	1.46969384566991	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCTTATAAATATGCAT	NA	False	NA	NA	False	AATAAA	-45	NA	25097482	25083397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086378_25086486_25086600_25091026_25091101_25094553_25094653_25096064_25096263_25097461
ES.14568.7	chr17	-	3236	6	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	2.13541565040626	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACTTTAAACCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	25100904	25083417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25086211_25086308_25086378_25086486_25086600_25091026_25091101_25094553_25094653_25100816
ES.14568.8	chr17	-	3369	6	Antisense	novelGene_ENSMUSG00000046070.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.93907194296653	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCAGTGCTTGGTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	25097482	25087218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_25089962_25091026_25091101_25094553_25094653_25094999_25095311_25096064_25096186_25097461
ES.14569.1	chr17	+	2070	3	ISM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	43	10	6	2	intron_retention	FALSE	canonical	3	99	junction_1	43	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105659	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25105735_25106753_25106892_25109256
ES.14569.10	chr17	+	1898	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	49	2	-8	0	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	25105702	25111121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.11	chr17	+	1628	6	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	99	junction_1	41.0687228922449	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	25105702	25111121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25110111_25110333
ES.14569.12	chr17	+	2036	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	70.7248188403477	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	25105703	25111120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25106220_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.13	chr17	+	1744	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	83.2899887274709	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTGTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	25105737	25111122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109610_25109806_25109910_25109984_25110111_25110333
ES.14569.14	chr17	+	2381	4	NIC	ENSMUSG00000024160.17	novel	1947	7	NA	NA	40	2	intron_retention	FALSE	canonical	3	6	junction_2	94.0224559465568	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105772	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25106892_25109256_25109435_25109806_25110111_25110333
ES.14569.15	chr17	+	1923	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	88	2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105820	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.16	chr17	+	1834	8	NIC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	109	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	89.8688386664994	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105841	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25106080_25106753_25106892_25108059_25108143_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.17	chr17	+	1530	6	NIC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	150	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	85.8100227246212	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTGTGTCTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	25105882	25111121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25106080_25106753_25106892_25109256_25109435_25109806_25109910_25109984_25110111_25110333
ES.14569.2	chr17	+	1592	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	46	3	9	-1	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTGTGTCTATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	25105662	25111120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.3	chr17	+	2665	5	NIC	ENSMUSG00000024160.17	novel	1955	6	NA	NA	4	5	intron_retention	FALSE	canonical	3	176	junction_3	16.8597153000874	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGCTGCCTGTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	25105679	25111116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25106892_25109256_25109435_25109541_25109730_25109806_25110111_25110333
ES.14569.4	chr17	+	1644	6	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	5	2	intron_retention	FALSE	canonical	3	99	junction_1	41.3356988570412	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105680	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109910_25109984_25110111_25110333
ES.14569.5	chr17	+	1518	7	NNC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	71.1937887428079	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGCCTGTGTCTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	25105682	25111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25110037_25110111_25110333
ES.14569.6	chr17	+	5167	3	NNC	ENSMUSG00000024160.17	novel	1955	6	NA	NA	9	5	intron_retention	FALSE	canonical	0	0	junction_1	110.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGCTGCCTGTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	25105684	25111116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25107715_25107756_25110111_25110333
ES.14569.7	chr17	+	1645	8	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	85.6733235455876	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	25105685	25111113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25105735_25106753_25106892_25108059_25108143_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ES.14569.8	chr17	+	1719	5	NIC	ENSMUSG00000024160.17	novel	1641	7	NA	NA	11	-2	intron_retention	FALSE	canonical	3	99	junction_1	45.915002994664	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGCCTGTGTCTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	25105686	25111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25110111_25110333
ES.14569.9	chr17	+	1853	7	NNC	ENSMUSG00000024160.17	novel	1953	7	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	79.3676396412431	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGCCTGTGTCTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	25105692	25111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25110037_25110111_25110333
ES.1457.1	chr1	+	5914	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	-37	3238	-37	2461	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGAAGTTTCTTCCC	6137	False	NA	41	True	AATATA	-42	NA	136059089	136102498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.11	chr1	+	4120	14	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	4	-5932	intron_retention	FALSE	canonical	3	43	junction_3	7.70767695376945	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACAGGTG	6178	False	NA	NA	False	NA	NA	NA	136059130	136086636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018
ES.1457.13	chr1	+	2531	14	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	11	23574	11	4431	5prime_fragment	FALSE	canonical	3	43	junction_3	9.2946507489189	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTCTCTGCTACTT	6185	False	NA	NA	False	AAAAAG	-13	NA	136059137	136082162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841
ES.1457.15	chr1	+	9068	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	11	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	6185	False	NA	6	True	AATAAA	-16	NA	136059137	136105739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.16	chr1	+	9003	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.6370213271633	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGTGGCTAGTGGGTT	6185	False	NA	3	True	AATAAA	-13	NA	136059137	136105736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136059501_136072336_136072560_136072968_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.19	chr1	+	9118	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	18.1464629514145	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGTGGCTAGTGGGTTG	6187	False	NA	4	True	AATAAA	-14	NA	136059139	136105737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089322_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.20	chr1	+	7349	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	-17	-1745	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	14.7554752022057	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCATCGTCCTGAGCC	6198	False	NA	NA	False	ACTAAA	-17	NA	136059150	136103991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.23	chr1	+	5054	8	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	2066	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	24.4214693101235	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	NA	False	NA	6	True	AATAAA	-16	NA	136092752	136105739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.24	chr1	+	4798	6	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	38598	1	673	-1	3prime_fragment	FALSE	canonical	3	64	junction_1	12.1885191881541	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGTGGCTAGTGGGT	NA	False	NA	2	True	AATAAA	-12	NA	136097724	136105735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.25	chr1	+	5408	4	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	1511	2	intron_retention	FALSE	canonical	3	77	junction_1	8.83176086632785	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGGCTAGTGGGTTGG	NA	False	NA	5	True	AATAAA	-15	NA	136098562	136105738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136099045_136099325_136099444_136099896_136100741_136101774
ES.1457.3	chr1	+	5857	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	-18	2462	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGAAGTTTCTTCCCA	6156	False	NA	42	True	AATATA	-43	NA	136059108	136102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.4	chr1	+	2962	17	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	-13	19490	-13	-6322	5prime_fragment	FALSE	canonical	3	43	junction_3	8.82113938218868	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCCTGTGAGAAATGGC	6161	False	NA	NA	False	AATACA	-16	NA	136059113	136086246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018
ES.1457.5	chr1	+	8870	36	NNC	ENSMUSG00000041642.19	novel	9254	36	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	15.4133258009068	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	6162	False	NA	6	True	AATAAA	-16	NA	136059114	136105739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774_136102643_136102902
ES.1457.7	chr1	+	9141	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	1	-27	1	27	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGGTAGCTCTTTCT	6175	False	NA	30	True	AATAAA	-40	NA	136059127	136105763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ES.1457.9	chr1	+	8962	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	17.7414144156301	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTAGTGGGTTGGT	6176	False	NA	6	True	AATAAA	-16	NA	136059128	136105739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774_136102788_136102902
ES.14570.10	chr17	-	1198	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234352.2	1224	6	24	2	4	0	multi-exon	FALSE	canonical	3	81	junction_4	254.082191426318	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105299	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105252
ES.14570.11	chr17	-	1360	7	NNC	ENSMUSG00000039183.7	novel	1445	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	254.63006935989	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105313	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25102289_25102779_25102850_25103149_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ES.14570.12	chr17	-	3544	2	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	771	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105301	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25103210_25103374
ES.14570.13	chr17	-	1695	6	NNC	ENSMUSG00000039183.7	novel	950	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_4	276.347317700028	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105312	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25102289_25102779_25103210_25103374_25103530_25104392_25104628_25104692_25104812_25105252
ES.14570.14	chr17	-	1396	7	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	308.14697070644	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105293	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105264
ES.14570.16	chr17	-	1430	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234489.2	1423	7	-7	0	2	0	multi-exon	FALSE	canonical	2	3	junction_4	262.106636483872	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105301	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103561_25104392_25104592_25104692_25104812_25105252
ES.14570.17	chr17	-	1812	5	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	41	junction_3	263.912272355796	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105283	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25103530_25104392_25104609_25104692_25104812_25105252
ES.14570.18	chr17	-	1650	6	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	41	junction_4	260.718698984173	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105286	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105252
ES.14570.19	chr17	-	2524	5	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	632	junction_1	53.1460252511888	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105314	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25103210_25103374_25104592_25104692_25104812_25105252
ES.14570.2	chr17	-	1429	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	2	-4	1	3	multi-exon	TRUE	canonical	3	605	junction_4	56.4111888034831	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTCTGTCTTGTTTGG	NA	False	NA	-2	True	AGTAAA	-28	NA	25105320	25101581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ES.14570.20	chr17	-	1657	6	NIC	ENSMUSG00000039183.7	novel	1440	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	605	junction_3	58.2113391015874	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105310	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ES.14570.21	chr17	-	1519	6	NIC	ENSMUSG00000039183.7	novel	1427	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	605	junction_4	60.398675482166	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105320	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104812_25105252
ES.14570.22	chr17	-	3709	1	NIC	ENSMUSG00000039183.7	novel	1445	7	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105301	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25101600_25105300
ES.14570.23	chr17	-	2625	4	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	632	junction_1	56.7587487137935	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTGGTCAAGGTGTC	NA	False	NA	-14	True	AGTAAA	-16	NA	25105315	25101593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25103210_25103374_25104812_25105252
ES.14570.24	chr17	-	2916	4	ISM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	-13	4	1	-2	intron_retention	FALSE	canonical	3	43	junction_1	332.446821144208	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGTGGTCAAGGTGT	NA	False	NA	-15	True	AGTAAA	-15	NA	25105320	25101594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374
ES.14570.25	chr17	-	2260	6	NIC	ENSMUSG00000039183.7	novel	1423	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	632	junction_1	49.4424918465888	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGTGGTCAAGGTGT	NA	False	NA	-15	True	AGTAAA	-15	NA	25105301	25101594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25104592_25104692_25104812_25105252
ES.14570.26	chr17	-	1447	7	NIC	ENSMUSG00000039183.7	novel	1445	7	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	313.810806414027	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAAGATGTGGTCAAGG	NA	False	NA	-18	True	AGTAAA	-12	NA	25105311	25101597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104838_25105252
ES.14570.27	chr17	-	6727	4	NNC	ENSMUSG00000073436.12	novel	752	4	NA	NA	0	717	intron_retention	FALSE	non_canonical	0	0	junction_1	17.9133717900592	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGTAACTTTAAAGACA	1889	False	NA	NA	False	NA	NA	NA	25114036	25106742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25112617_25113104
ES.14570.28	chr17	-	5521	9	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	0	367	intron_retention	TRUE	non_canonical	0	0	junction_1	14.5939842058295	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTGGTGAACAAGCATT	1889	False	NA	NA	False	AATAAA	-7	NA	25114036	25107092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.29	chr17	-	5720	5	NNC	ENSMUSG00000073436.12	novel	779	5	NA	NA	1	58	intron_retention	FALSE	non_canonical	0	0	junction_1	17.8378109643532	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCCTTTGATCCCAG	1890	False	NA	NA	False	NA	NA	NA	25114035	25107401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25112617_25113104_25113198_25113544
ES.14570.3	chr17	-	1443	7	FSM	ENSMUSG00000039183.7	ENSMUST00000235055.2	950	7	-8	-485	1	0	multi-exon	FALSE	canonical	3	41	junction_5	246.619646419339	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGTGTCTGTCTTGTT	NA	False	NA	-5	True	AGTAAA	-25	NA	25105320	25101584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104609_25104692_25104812_25105252
ES.14570.30	chr17	-	5232	9	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	4	57	intron_retention	FALSE	non_canonical	0	0	junction_1	14.5939842058295	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACATGCCTTTGATCCCA	1868	False	NA	NA	False	NA	NA	NA	25114057	25107402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.31	chr17	-	5077	8	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	-6	11	intron_retention	FALSE	non_canonical	0	0	junction_1	16.1662283410668	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAGTGTGAGACCATTT	1883	False	NA	NA	False	AATAAA	-27	NA	25114042	25107448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25111919_25112012_25112129_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.32	chr17	-	4936	7	NNC	ENSMUSG00000073436.12	novel	5226	7	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	17.1269767715535	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTGTGTTACAGTG	1897	False	NA	NA	False	AATAAA	-16	NA	25114028	25107459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25111919_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.33	chr17	-	5087	10	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	13.7607421562704	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGCCTGTGTTACAG	1883	False	NA	NA	False	AATAAA	-14	NA	25114042	25107461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25107718_25107758_25108556_25108593_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.34	chr17	-	4150	9	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	0	-974	intron_retention	FALSE	non_canonical	0	0	junction_1	11.3240617712904	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTCTGGTGCTTTT	1889	False	NA	NA	False	NA	NA	NA	25114036	25108433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25108556_25108593_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.35	chr17	-	1344	8	NNC	ENSMUSG00000073436.12	novel	1521	8	NA	NA	106	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.6828847430062	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAAGGCTCTTTTAA	2032	False	NA	NA	False	GATAAA	-24	NA	25113893	25111117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25111641_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ES.14570.36	chr17	-	2078	3	ISM	ENSMUSG00000073436.12	ENSMUST00000127293.8	752	4	-3	-1210	-3	-1	intron_retention	FALSE	canonical	3	33	junction_2	2.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGGCATTTGTGAAGG	1886	False	NA	NA	False	GATAAA	-15	NA	25114039	25111126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25112617_25113104_25113198_25113544
ES.14570.37	chr17	-	868	4	ISM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	1752	1	850	-1	3prime_fragment	FALSE	canonical	3	24	junction_1	5.24933858267454	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGGCATTTGTGAAGG	3616	False	NA	NA	False	GATAAA	-15	NA	25112309	25111126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278
ES.14570.38	chr17	-	1915	6	NIC	ENSMUSG00000073436.12	novel	5226	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	26	junction_1	4.16653333119993	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGGCATTTGTGAAGG	1887	False	NA	NA	False	GATAAA	-15	NA	25114038	25111126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113682_25113794
ES.14570.4	chr17	-	1456	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234579.2	1445	7	-11	0	-1	0	multi-exon	FALSE	canonical	3	14	junction_6	253.310580118557	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGTGTCTGTCTTGTT	NA	False	NA	-5	True	AGTAAA	-25	NA	25105324	25101584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
ES.14570.5	chr17	-	1503	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	3	-4	-1	-1	multi-exon	FALSE	canonical	3	43	junction_1	246.820953999723	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCAAGGTGTCTGTCTTG	NA	False	NA	-7	True	AGTAAA	-23	NA	25105304	25101586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ES.14570.6	chr17	-	4155	6	FSM	ENSMUSG00000073436.12_ENSMUSG00000039183.7	ENSMUST00000234928.2	1471	6	-2689	5	-2291	0	multi-exon	FALSE	canonical	3	605	junction_4	61.1391854705311	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	8311	False	NA	-11	True	AGTAAA	-19	NA	25107614	25101590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692
ES.14570.7	chr17	-	2789	4	ISM	ENSMUSG00000039183.7	ENSMUST00000234261.2	1221	6	5	5	-3	0	intron_retention	FALSE	canonical	3	632	junction_1	57.6445044118595	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105284	25101590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374
ES.14570.8	chr17	-	3195	2	ISM	ENSMUSG00000039183.7	ENSMUST00000234261.2	1221	6	13	5	5	0	intron_retention	FALSE	canonical	3	632	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105276	25101590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25102289_25102779
ES.14570.9	chr17	-	1394	7	NIC	ENSMUSG00000039183.7	novel	1427	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	244.594051440341	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105308	25101592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105264
ES.14571.1	chr17	+	933	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	-15	0	-15	0	multi-exon	FALSE	canonical	3	645	junction_1	12	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114074	25115263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25114463_25114635_25114679_25114761
ES.14571.2	chr17	+	1067	2	FSM	ENSMUSG00000038880.14	ENSMUST00000138648.2	899	2	4	-172	4	-1	multi-exon	FALSE	canonical	3	669	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTGGTTTCATTAC	NA	False	NA	15	True	AATAAA	-15	NA	25114112	25115262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25114679_25114761
ES.14571.3	chr17	+	1789	4	NIC	ENSMUSG00000038880.14	novel	1884	6	NA	NA	24	-7	intron_retention	FALSE	canonical	1	3	junction_3	308.454210540236	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTTGTGCGCTGGTG	NA	False	NA	9	True	AATAAA	-8	NA	25114132	25116469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25114463_25114635_25114679_25114761_25115534_25115825
ES.14571.4	chr17	+	2021	4	NIC	ENSMUSG00000038880.14	novel	1884	6	NA	NA	25	2	intron_retention	FALSE	canonical	3	182	junction_3	224.131409866821	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGCTGGTGAAGTTTCAA	NA	False	NA	18	True	AATAAA	-17	NA	25114133	25116478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25114463_25114635_25114679_25114761_25115534_25115601
ES.14571.5	chr17	+	2118	4	NIC	ENSMUSG00000038880.14	novel	1884	6	NA	NA	25	0	intron_retention	FALSE	canonical	3	182	junction_2	225.897223434808	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGCTGGTGAAGTTTC	NA	False	NA	16	True	AATAAA	-15	NA	25114133	25116476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25114679_25114761_25115534_25115601_25115928_25116001
ES.14571.6	chr17	+	725	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	-5	-5	-5	5	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGTGTTAAGACATT	NA	False	NA	41	True	AATAAA	-40	NA	25115468	25116501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
ES.14571.7	chr17	+	760	4	ISM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	13	15	-8	-15	intron_retention	FALSE	canonical	3	182	junction_1	9.62635271879577	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGGTGAAGTTTCAAGAC	NA	False	NA	21	True	AATAAA	-20	NA	25115486	25116481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001
ES.14571.8	chr17	+	712	4	FSM	ENSMUSG00000073435.11	ENSMUST00000145688.8	484	4	53	-281	51	3	multi-exon	FALSE	canonical	3	183	junction_3	9.17726659862414	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGTAGTGTTAAGACA	NA	False	NA	39	True	AATAAA	-38	NA	25115547	25116499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25115733_25115825_25115928_25116001_25116115_25116187
ES.14572.1	chr17	+	1446	1	Intergenic	novelGene_12214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	225	False	NA	NA	False	NA	NA	NA	25159901	25161347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25159900_25161300
ES.14573.1	chr17	-	5776	33	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	19.3568463340494	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGTTTTCTGCAGTTTT	NA	False	NA	2	True	AATAAA	-41	NA	25155944	25116479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25136393_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.10	chr17	-	5836	32	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_12	22.1716884090831	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155920	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121378_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25135942_25136143_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.11	chr17	-	5382	30	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	18.9955874468116	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155916	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118570_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.12	chr17	-	8361	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_20	18.2021061052469	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155971	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125201_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.13	chr17	-	5431	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.79845672998	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155932	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119768_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124264_25125117_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.16	chr17	-	6068	33	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	20.2530861845794	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155912	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25122065_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25135942_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.17	chr17	-	5578	30	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_15	15.7412943306994	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155947	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122359_25122898_25123026_25123618_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.18	chr17	-	4963	24	NIC	ENSMUSG00000024163.18	novel	5410	32	NA	NA	3790	0	intron_retention	FALSE	canonical	0	0	junction_23	16.9100813322002	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	8575	False	NA	-26	True	AATAAA	-13	NA	25131751	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25128136_25131721
ES.14573.19	chr17	-	6237	31	NNC	ENSMUSG00000024163.18	novel	5410	32	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_23	21.2406580772714	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155962	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126361_25127384_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.2	chr17	-	5500	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	14.0296907386522	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGGTTTTCTGCAGTT	NA	False	NA	0	True	AATAAA	-39	NA	25155962	25116481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.20	chr17	-	5428	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	15.9032142104111	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155928	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126387_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.21	chr17	-	5574	31	NNC	ENSMUSG00000024163.18	novel	5603	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.2468036811815	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155951	25116507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119467_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125205_25125782_25125936_25126302_25126361_25131698_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.23	chr17	-	5442	31	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	18	junction_22	11.8369008706765	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155942	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.24	chr17	-	5382	31	NIC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_26	15.9584530021623	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155912	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137111_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.26	chr17	-	6087	33	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	23.6226023915656	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155942	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124159_25124273_25125147_25125203_25125782_25125872_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25135942_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.27	chr17	-	3694	11	NIC	ENSMUSG00000024163.18	novel	5579	31	NA	NA	-681	-1	intron_retention	FALSE	canonical	3	51	junction_9	6.7297845433565	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	7970	False	NA	-27	True	AATAAA	-12	NA	25121373	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25118044_25118118_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578
ES.14573.28	chr17	-	5635	30	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-35	-1	intron_retention	FALSE	non_canonical	0	0	junction_21	14.2580265064038	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155986	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131698_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.29	chr17	-	5403	30	NNC	ENSMUSG00000024163.18	novel	4173	32	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	20.9225398885136	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155944	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123936_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137111_25142785_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.3	chr17	-	5474	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	15.9032142104111	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGCACAAGGGTTTTCT	NA	False	NA	-6	True	AATAAA	-33	NA	25155969	25116487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.30	chr17	-	6524	32	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	17.2007792094146	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155931	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.31	chr17	-	6307	34	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	22.7166439793002	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155962	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125403_25125495_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25135942_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.33	chr17	-	5470	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	17.2490257373826	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155929	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120218_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131698_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.35	chr17	-	5540	32	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	20.205139412755	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155933	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25137061_25137111_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.36	chr17	-	5520	31	NNC	ENSMUSG00000024163.18	novel	5603	32	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	16.2864633634466	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155916	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.37	chr17	-	5444	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.2130441493911	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155953	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120218_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126361_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.38	chr17	-	7355	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_22	15.7589128220615	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155920	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25135604_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.4	chr17	-	5476	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	14.0296907386522	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGCGCACAAGGGTTT	NA	False	NA	-9	True	AATAAA	-30	NA	25155935	25116490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131698_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.40	chr17	-	8821	30	NNC	ENSMUSG00000024163.18	novel	5603	32	NA	NA	6	-1	intron_retention	FALSE	non_canonical	0	0	junction_22	13.1790920063475	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155928	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.41	chr17	-	7067	34	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	20.8472515491456	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTGAAACTTC	NA	False	NA	-27	True	AATAAA	-12	NA	25155953	25116508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128587_25128705_25128775_25131721_25131841_25132503_25132607_25133432_25133680_25135477_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.42	chr17	-	6183	33	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	21.2723916952819	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTTTTGTCTTGAAACT	NA	False	NA	-29	True	AATAAA	-10	NA	25155927	25116510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126298_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25135942_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.43	chr17	-	5550	32	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	17.611780656652	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACTTTTGTCTTGAAAC	NA	False	NA	-30	True	AATAAA	-9	NA	25155916	25116511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.44	chr17	-	4840	27	NNC	ENSMUSG00000024163.18	novel	5431	31	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	17.432710870201	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACTTTTGTCTTGAAAC	NA	False	NA	-30	True	AATAAA	-9	NA	25142883	25116511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126387_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137131_25142785
ES.14573.45	chr17	-	1311	8	ISM	ENSMUSG00000024163.18	ENSMUST00000117509.8	5418	33	-47	15819	1	2002	5prime_fragment	FALSE	canonical	3	27	junction_2	15.2970585407784	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACAGTGGTGACTCGAG	NA	False	NA	NA	False	NA	NA	NA	25155933	25132325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.46	chr17	-	3734	10	Fusion	ENSMUSG00000024163.18_ENSMUSG00000024165.10	novel	2672	5	NA	NA	3	-6	multi-exon	TRUE	canonical	0	0	junction_5	864.029463375091	1468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTCAGTTGAGTGCCT	4829	False	NA	-8	True	AATAAA	-20	NA	25179607	25134333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25163413_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.47	chr17	-	3528	6	ISM	ENSMUSG00000024163.18	ENSMUST00000115229.10	5603	32	0	17855	0	-7	5prime_fragment	FALSE	canonical	3	49	junction_1	8.77724330299668	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTTCAGTTGAGTGCC	NA	False	NA	-9	True	AATAAA	-19	NA	25155951	25134334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.48	chr17	-	1176	6	ISM	ENSMUSG00000024163.18	ENSMUST00000115229.10	5603	32	16	20191	-1	-2343	5prime_fragment	FALSE	canonical	3	49	junction_1	8.77724330299668	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGCTAGAATGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	25155935	25136670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.49	chr17	-	450	1	Intergenic	novelGene_12213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25148128	25147678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25147700_25148100
ES.14573.5	chr17	-	8310	31	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_22	16.9684674879286	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155944	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.50	chr17	-	4433	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	21	-1782	1	1782	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTTTGTTTTGTTTTG	4794	False	NA	NA	False	AATGAA	-17	NA	25179642	25159661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.51	chr17	-	3066	4	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	4	1213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	833.617151668292	1339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTGTGTCAGGATGAC	4797	False	NA	45	True	NA	NA	NA	25179639	25160230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25162986_25167690_25167755_25174991_25175141_25179541
ES.14573.52	chr17	-	3866	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	19	-1213	-1	1213	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTGTGTCAGGATGAC	4792	False	NA	45	True	NA	NA	NA	25179644	25160230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.53	chr17	-	3531	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	21	-880	1	880	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	4794	False	NA	NA	False	NA	NA	NA	25179642	25160563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.54	chr17	-	3346	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	11	-685	-9	685	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACTCCATATCTAGAT	4784	False	NA	NA	False	AATACA	-18	NA	25179652	25160758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.55	chr17	-	3130	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	43	-501	-1	501	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTGTTCTGTAGTCGG	4816	False	NA	NA	False	NA	NA	NA	25179620	25160942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.56	chr17	-	3099	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	-106	-321	-106	321	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTATTTTGTGTT	4667	False	NA	-1	True	ATTAAA	-18	NA	25179769	25161122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.57	chr17	-	2805	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-2	318	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	800.526077026851	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGTGTGTATTTTGT	4815	False	NA	-4	True	ATTAAA	-15	NA	25179621	25161125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25163653_25164553_25164603_25174991_25175141_25179541
ES.14573.58	chr17	-	2977	5	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-3	318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	770.555440899615	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGTGTGTATTTTGT	4770	False	NA	-4	True	ATTAAA	-15	NA	25179666	25161125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179557
ES.14573.6	chr17	-	6519	31	NNC	ENSMUSG00000024163.18	novel	5431	31	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	19.7124044420991	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155944	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25136560_25137061_25137114_25142785_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.60	chr17	-	2889	6	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-1	317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	717.8895179622	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4816	False	NA	-5	True	ATTAAA	-14	NA	25179620	25161126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163653_25164553_25164603_25167611_25167686_25167742_25167755_25174991_25175141_25179541
ES.14573.61	chr17	-	5917	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	28	317	intron_retention	FALSE	canonical	3	1697	junction_2	55.874860178796	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4854	False	NA	-5	True	ATTAAA	-14	NA	25179582	25161126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25163653_25164553_25167755_25174991_25175141_25179541
ES.14573.63	chr17	-	2933	5	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	3	317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	783.095300713777	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCTGTGTGTATTTTG	4820	False	NA	-5	True	ATTAAA	-14	NA	25179616	25161126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163644_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.64	chr17	-	2199	4	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-11	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	833.617151668292	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4806	False	NA	-6	True	ATTAAA	-13	NA	25179630	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25162946_25167611_25167755_25174991_25175141_25179541
ES.14573.65	chr17	-	2590	6	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	2	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	717.8895179622	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4795	False	NA	-6	True	ATTAAA	-13	NA	25179641	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25161280_25161655_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.67	chr17	-	7324	4	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	65	-316	12	316	intron_retention	FALSE	canonical	3	1697	junction_3	76.1051903617618	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4838	False	NA	-6	True	ATTAAA	-13	NA	25179598	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991
ES.14573.68	chr17	-	3847	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-2	316	intron_retention	FALSE	canonical	3	1697	junction_2	76.4852927038918	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4815	False	NA	-6	True	ATTAAA	-13	NA	25179621	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.69	chr17	-	2894	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	1	316	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	829.854204062376	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4818	False	NA	-6	True	ATTAAA	-13	NA	25179618	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25163653_25167611_25167755_25174991_25175141_25179541
ES.14573.7	chr17	-	4826	29	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	16.8127441944181	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25142811	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25128705_25128775_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789
ES.14573.70	chr17	-	2951	5	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	1	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	788.645833058161	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4818	False	NA	-6	True	ATTAAA	-13	NA	25179618	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163653_25164553_25164603_25167611_25167763_25174991_25175141_25179541
ES.14573.71	chr17	-	2694	4	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	28	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	843.854779502308	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4854	False	NA	-6	True	ATTAAA	-13	NA	25179582	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163653_25164553_25164603_25175061_25175141_25179541
ES.14573.72	chr17	-	1530	5	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	10	316	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	872.136600539159	1338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGTGTGTATTTT	4836	False	NA	-6	True	ATTAAA	-13	NA	25179600	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25162162_25163413_25163653_25164553_25164603_25174991_25175141_25179541
ES.14573.73	chr17	-	3001	5	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	9	315	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	732.597220510698	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACAGCCTGTGTGTATTT	4835	False	NA	-7	True	ATTAAA	-12	NA	25179601	25161128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179465
ES.14573.74	chr17	-	3570	1	NIC	ENSMUSG00000024165.10	novel	1430	6	NA	NA	14912	315	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACAGCCTGTGTGTATTT	NA	False	NA	-7	True	ATTAAA	-12	NA	25164698	25161128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25161100_25164700
ES.14573.75	chr17	-	2713	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	1	-42	1	42	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCCTTACATTATAATA	4774	False	NA	41	True	AAGAAA	-1	NA	25179662	25161401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.76	chr17	-	3516	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1697	junction_2	76.4852927038918	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGCCAATATTTTTC	4829	False	NA	-2	True	ATTAAA	-16	NA	25179607	25161444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.77	chr17	-	2565	6	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	11	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	717.8895179622	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGTGCCAATATTTTT	4837	False	NA	-3	True	ATTAAA	-15	NA	25179599	25161445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25162946_25162986_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.78	chr17	-	2620	5	NNC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	770.555440899615	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGTGCCAATATTTTT	4807	False	NA	-3	True	ATTAAA	-15	NA	25179629	25161445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179557
ES.14573.8	chr17	-	5683	33	NNC	ENSMUSG00000024163.18	novel	5418	33	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	19.3568463340494	193	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155965	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126368_25131717_25131841_25132503_25132607_25133432_25133680_25135477_25135604_25136480_25136560_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ES.14573.81	chr17	-	2388	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	-22	306	-22	-306	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAGTAGAAAATGATTT	4751	False	NA	NA	False	GATAAA	-17	NA	25179685	25161749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.82	chr17	-	2264	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	-2	-317	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	829.854204062376	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTGCTCTCTTAAGTA	4815	False	NA	NA	False	GATAAA	-6	NA	25179621	25161760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25163653_25167611_25167755_25174991_25175141_25179541
ES.14573.83	chr17	-	1593	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	76	1003	23	967	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACGCTTAGAAAAGTGC	4849	False	NA	-12	True	TATAAA	-15	NA	25179587	25162446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.84	chr17	-	1005	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	85	1582	32	388	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTCAGGAAATGCCT	4858	False	NA	NA	False	NA	NA	NA	25179578	25163025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.85	chr17	-	663	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	32	1977	-12	-7	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATGTTAGTGTTTCCT	4805	False	NA	NA	False	NA	NA	NA	25179631	25163420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ES.14573.86	chr17	-	391	3	FSM	ENSMUSG00000024165.10	ENSMUST00000233316.2	1705	3	35	1279	35	66	multi-exon	FALSE	canonical	3	1697	junction_1	67.5	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTTCCAAAGCAGTGT	4861	False	NA	NA	False	AATAAA	-23	NA	25179575	25167546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25167755_25174991_25175141_25179541
ES.14573.9	chr17	-	6792	25	NNC	ENSMUSG00000024163.18	novel	5431	31	NA	NA	-250	0	intron_retention	FALSE	non_canonical	0	0	junction_9	16.766161357528	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	4535	False	NA	-25	True	AATAAA	-14	NA	25135791	25116506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120075_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25131697_25131841_25132503_25132607_25133432
ES.14574.1	chr17	+	1843	1	Antisense	novelGene_ENSMUSG00000038002.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGCACCTGGAAGGCAC	NA	False	NA	NA	False	NA	NA	NA	25212701	25214544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_25212700_25214500
ES.14575.1	chr17	-	7704	21	FSM	ENSMUSG00000038002.10	ENSMUST00000233774.2	7674	21	-30	0	-30	0	multi-exon	FALSE	canonical	1	1	junction_9	1.96468827043885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTTTGTGCCTGC	5343	False	NA	0	True	CATAAA	-23	NA	25234792	25180199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202917_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661_25233000_25234503
ES.14575.2	chr17	-	3008	3	NNC	ENSMUSG00000038002.10	novel	7674	21	NA	NA	3	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTTCGGCTTGTAAA	5382	False	NA	-61	True	AATAAA	-28	NA	25234753	25180260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25182729_25232709_25233000_25234503
ES.14575.3	chr17	-	5087	21	NNC	ENSMUSG00000038002.10	novel	7674	21	NA	NA	-29	-2657	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2.1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCAGGGTTTCTCTGTGT	5344	False	NA	NA	False	NA	NA	NA	25234791	25182856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202876_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661_25233000_25234503
ES.14575.4	chr17	-	175	1	Intergenic	novelGene_12215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	25187005	25186830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25186800_25187000
ES.14575.5	chr17	-	4099	3	ISM	ENSMUSG00000038002.10	ENSMUST00000233774.2	7674	21	41	38637	35	3539	5prime_fragment	FALSE	canonical	2	3	junction_2	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGCCATATCTCCA	5414	False	NA	NA	False	NA	NA	NA	25234721	25218836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25222380_25232661_25233000_25234503
ES.14575.6	chr17	-	3588	1	NIC	ENSMUSG00000038002.10	novel	7519	21	NA	NA	11752	3511	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	2245	False	NA	NA	False	NA	NA	NA	25222452	25218864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25218900_25222500
ES.14575.7	chr17	-	3953	2	NNC	ENSMUSG00000038002.10	novel	694	3	NA	NA	11009	3510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAGAAAA	1502	False	NA	NA	False	NA	NA	NA	25223195	25218865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25221653_25222029
ES.14576.1	chr17	+	5086	30	NIC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-47	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	15.5658243289342	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTACTTCTCTCGTGAG	6830	False	NA	27	True	AATAAA	-32	NA	25235011	25318473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.10	chr17	+	5385	29	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	16.280857671837	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTCTCAAAAGGCTGT	7157	False	NA	13	True	AATAAA	-18	NA	25235338	25318459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.11	chr17	+	4904	30	NNC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	-23	-975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	15.7992007504165	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGACTATTTGGCAG	7160	False	NA	NA	False	AATAAA	-16	NA	25235341	25314686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25314535
ES.14576.12	chr17	+	3207	19	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-10	21857	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	15.6817303467018	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGACTGTCGTCCGCTG	7173	False	NA	NA	False	AATAGA	-21	NA	25235354	25277835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25277585
ES.14576.13	chr17	+	6903	29	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	43	junction_2	11.5092575870071	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGTTCTCTCAAAAGGC	7174	False	NA	10	True	AATAAA	-15	NA	25235355	25318456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25313756_25317702
ES.14576.14	chr17	+	5257	29	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	3	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.986282384901	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTTAGTTCTCTCAAAAG	7186	False	NA	8	True	AATAAA	-13	NA	25235367	25318454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25235879_25237734_25237913_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.15	chr17	+	5157	30	NNC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9452839691278	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	7186	False	NA	15	True	AATAAA	-20	NA	25235367	25318461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235550_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.18	chr17	+	4552	30	NNC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	11	-976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.2019899005533	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGTGACTATTTGGCA	7202	False	NA	NA	False	AATAAA	-15	NA	25235383	25314685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235574_25237734_25237913_25239491_25239714_25244523_25244642_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25314535
ES.14576.2	chr17	+	5250	30	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-20	-3	intron_retention	FALSE	canonical	0	0	junction_17	21.3994899202437	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTCTCTCAAAAGGCTG	6857	False	NA	12	True	AATAAA	-17	NA	25235038	25318458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25273289_25273414_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25312204_25313613_25313756_25317702
ES.14576.20	chr17	+	5820	29	NNC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	48	-5	intron_retention	FALSE	canonical	0	0	junction_4	15.772942473924	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGTTCTCTCAAAAGGC	7239	False	NA	10	True	AATAAA	-15	NA	25235420	25318456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244674_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.23	chr17	+	3761	14	NNC	ENSMUSG00000024169.17	novel	908	4	NA	NA	7863	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.1629456850487	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTACTTCTCTCG	NA	False	NA	23	True	AATAAA	-28	NA	25272402	25318469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25273414_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.24	chr17	+	3830	12	NIC	ENSMUSG00000024169.17	novel	2938	15	NA	NA	9997	-6	intron_retention	FALSE	canonical	3	52	junction_7	9.82407230705347	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTTAGTTCTCTCAAAAGG	157	False	NA	9	True	AATAAA	-14	NA	25274536	25318455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.25	chr17	+	4040	1	Antisense	novelGene_ENSMUSG00000024168.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAATAATTCTGA	1721	False	NA	NA	False	NA	NA	NA	25276100	25280140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_25276100_25280100
ES.14576.26	chr17	+	4501	2	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	4255	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCGTTAGTTCTCTCA	5255	False	NA	4	True	AATAAA	-9	NA	25313899	25318450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25316467_25316516
ES.14576.27	chr17	+	3183	1	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	5633	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAAAAGGCTGTA	6633	False	NA	14	True	AATAAA	-19	NA	25315277	25318460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25315300_25318500
ES.14576.3	chr17	+	8702	29	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_11	19.0794191393207	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	6857	False	NA	15	True	AATAAA	-20	NA	25235038	25318461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255319_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.4	chr17	+	5067	30	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9452839691278	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAAAAGGCTGTA	6862	False	NA	14	True	AATAAA	-19	NA	25235043	25318460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235137_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.5	chr17	+	5883	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	-321	-73	-15	65	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCCTGTGTGTCATC	6862	False	NA	88	True	NA	NA	NA	25235043	25318534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.6	chr17	+	3159	19	NNC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	22	21850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	22.3736507283362	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGAAACAGACTGTCG	6905	False	NA	NA	False	AATAGA	-14	NA	25235086	25277828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235574_25237734_25237913_25239491_25239714_25244523_25244642_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25277585
ES.14576.7	chr17	+	5668	19	NNC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	22	-5500	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	15.4999004377527	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTGTAGCAAGTGTC	6905	False	NA	NA	False	NA	NA	NA	25235086	25301465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25299022
ES.14576.8	chr17	+	5214	30	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	15.4415779815037	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	7153	False	NA	15	True	AATAAA	-20	NA	25235334	25318461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25235574_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ES.14576.9	chr17	+	3080	18	ISM	ENSMUSG00000024169.17	ENSMUST00000142000.9	6942	29	277	40826	-29	18857	5prime_fragment	FALSE	canonical	3	43	junction_2	9.75655223010081	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTATAAGTATTTTAC	7154	False	NA	NA	False	AAAAAG	-18	NA	25235335	25274835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531
ES.14577.1	chr17	-	178	1	Intergenic	novelGene_12216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAGACATATCTTTG	7899	False	NA	NA	False	NA	NA	NA	25240242	25240064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25240100_25240200
ES.14578.1	chr17	-	207	1	Intergenic	novelGene_12217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTAGTTAAATGTGCA	7328	False	NA	NA	False	AATATA	-2	NA	25240813	25240606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25240600_25240800
ES.14579.1	chr17	-	176	1	Intergenic	novelGene_12218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAAGAAAAT	4489	False	NA	NA	False	NA	NA	NA	25269819	25269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25269600_25269800
ES.1458.1	chr1	-	557	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCAGAGCCAGAAACTT	NA	False	NA	NA	False	ATTAAA	-13	NA	136068158	136067601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136067600_136068200
ES.14580.1	chr17	-	3545	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	-15	0	-15	0	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTTCTGTGGTTCTTA	NA	False	NA	-1	True	AATAAA	-21	NA	25334956	25318543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.10	chr17	-	3570	21	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	22.1909891622703	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334942	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.11	chr17	-	3719	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	2	2	intron_retention	FALSE	canonical	3	51	junction_17	14.0771518776402	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334939	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.12	chr17	-	3544	19	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	5	2	intron_retention	FALSE	canonical	2	4	junction_3	28.9209757702982	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334936	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.13	chr17	-	3917	19	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	152	2	intron_retention	FALSE	canonical	3	51	junction_16	12.9882425464127	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334727	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.14	chr17	-	3186	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	208	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	23.2545828444352	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334671	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.15	chr17	-	6611	19	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	2	2	intron_retention	FALSE	canonical	1	1	junction_2	23.663080062086	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334939	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320662_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.16	chr17	-	3612	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-8	1	intron_retention	FALSE	canonical	3	51	junction_17	12.7013424378288	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGGCTGCTTCTGTGG	NA	False	NA	-7	True	AATAAA	-15	NA	25334949	25318549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.17	chr17	-	3089	19	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	68	0	intron_retention	FALSE	canonical	0	0	junction_8	33.223383480262	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334098	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324304_25324409_25324703_25324816_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ES.14580.18	chr17	-	2949	10	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	-173	0	intron_retention	FALSE	canonical	2	3	junction_8	28.6434014119211	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25325966	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324816_25324962_25325043_25325745
ES.14580.19	chr17	-	3419	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	23.0195629195758	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334937	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.20	chr17	-	4626	14	NIC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	-1324	0	intron_retention	FALSE	canonical	3	57	junction_12	12.5401131521937	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25328448	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300
ES.14580.21	chr17	-	3516	21	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	25.779061270729	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334917	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ES.14580.22	chr17	-	5181	18	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	12	0	intron_retention	FALSE	canonical	3	51	junction_15	15.019710233614	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334916	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.23	chr17	-	3798	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	7	0	intron_retention	FALSE	canonical	3	51	junction_17	14.1800843524913	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334921	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.24	chr17	-	3125	19	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.7108294619828	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334945	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329328_25330089_25330159_25333910_25334260_25334386
ES.14580.25	chr17	-	3365	22	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	22.5898056593653	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334948	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386_25334762_25334926
ES.14580.26	chr17	-	3736	20	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	16	0	intron_retention	FALSE	canonical	2	5	junction_14	25.9737775287611	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334912	25318550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ES.14580.27	chr17	-	3350	20	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	131	-1	intron_retention	FALSE	canonical	1	1	junction_18	23.2657774186028	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACACAGGCTGCTTCTGT	NA	False	NA	-9	True	AATAAA	-13	NA	25334748	25318551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332108_25333910_25334260_25334386
ES.14580.28	chr17	-	3521	21	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.8811603726734	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACACAGGCTGCTTCTG	NA	False	NA	-10	True	AATAAA	-12	NA	25334917	25318552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329328_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.29	chr17	-	3483	21	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.0800779894696	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACACAGGCTGCTTCTG	NA	False	NA	-10	True	AATAAA	-12	NA	25334942	25318552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334425
ES.14580.3	chr17	-	4562	18	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-15	3	intron_retention	FALSE	canonical	2	5	junction_12	23.9171001933951	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334956	25318547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.30	chr17	-	3837	20	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	5	junction_14	26.2656364192779	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACACAGGCTGCTTCTG	NA	False	NA	-10	True	AATAAA	-12	NA	25334945	25318552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ES.14580.31	chr17	-	4108	18	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_15	26.96197501827	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACACAGGCTGCTTCTG	NA	False	NA	-10	True	AATAAA	-12	NA	25334921	25318552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330182_25331953_25332232_25333910_25334260_25334413
ES.14580.32	chr17	-	3623	20	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	6	-5	intron_retention	FALSE	canonical	2	5	junction_14	22.0312042616566	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACACACAGGCTGCTT	NA	False	NA	-13	True	AATAAA	-9	NA	25334922	25318555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ES.14580.33	chr17	-	1838	1	Genic_Genomic	ENSMUSG00000024170.16	novel	NA	NA	NA	NA	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTGCCAACAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	25334942	25333104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_25333100_25334900
ES.14580.34	chr17	-	1705	2	FSM	ENSMUSG00000024170.16	ENSMUST00000130525.2	1697	2	-14	6	-1	-6	multi-exon	FALSE	canonical	3	73	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGACTTGTGCCAACA	NA	False	NA	NA	False	NA	NA	NA	25334942	25333110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25334260_25334386
ES.14580.4	chr17	-	5480	18	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	4	3	intron_retention	FALSE	canonical	3	51	junction_16	13.1272715944925	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334875	25318547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25326105_25326300_25326370_25329200_25329304_25329680_25330159_25331953_25334260_25334386
ES.14580.5	chr17	-	3501	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	-64	-3	-2	3	multi-exon	FALSE	canonical	3	21	junction_20	19.5787512369916	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334943	25318547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ES.14580.6	chr17	-	7049	16	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	-3	3	intron_retention	FALSE	canonical	2	5	junction_12	25.3008563754932	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCTGCTTCTGTGGTT	NA	False	NA	-5	True	AATAAA	-17	NA	25334931	25318547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953
ES.14580.7	chr17	-	3214	20	NNC	ENSMUSG00000024170.16	novel	3434	21	NA	NA	163	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	31.0050482887962	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334716	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329345_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ES.14580.8	chr17	-	3222	20	NIC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	21.9589140400243	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25334916	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25333910_25334260_25334386
ES.14580.9	chr17	-	4384	13	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	2627	2	intron_retention	FALSE	canonical	2	3	junction_7	33.8472877626685	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGGCTGCTTCTGTGGT	NA	False	NA	-6	True	AATAAA	-16	NA	25329988	25318548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25319095_25320272_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324816_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680
ES.14581.1	chr17	-	181	1	Intergenic	novelGene_12219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTCAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25349356	25349175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25349200_25349400
ES.14582.1	chr17	+	4089	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	-16	-2	-16	2	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTTATTTTGACTCT	NA	False	NA	22	True	NA	NA	NA	25352348	25381080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.10	chr17	+	7936	8	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	14	-3732	intron_retention	FALSE	canonical	3	123	junction_7	10.5211157940126	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGAAGGGAAGGGGAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	25352378	25374984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25371383_25371989
ES.14582.11	chr17	+	4038	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	29.3417364857638	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352383	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375819_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.12	chr17	+	4985	23	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	19	0	intron_retention	FALSE	canonical	3	118	junction_7	11.4054684578847	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352383	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.13	chr17	+	4354	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	20	1	intron_retention	FALSE	canonical	3	13	junction_14	27.0629036901746	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352384	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.14	chr17	+	4265	15	ISM	ENSMUSG00000036636.11	ENSMUST00000233633.2	4067	25	20	6094	20	-3732	intron_retention	FALSE	canonical	2	12	junction_13	34.0186023540423	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGAAGGGAAGGGGAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	25352384	25374984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989
ES.14582.15	chr17	+	8539	20	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	25	0	intron_retention	FALSE	canonical	3	111	junction_7	12.0885468104698	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352389	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.16	chr17	+	4106	26	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	36.5755328054152	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352389	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366378_25366445_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.17	chr17	+	8899	18	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	25	0	intron_retention	FALSE	canonical	3	118	junction_11	10.493036082487	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352389	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25366765_25368012_25369255_25369515_25369581_25370089_25370207_25370677_25371383_25371989_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.18	chr17	+	3833	23	NNC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	26	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.1170103135167	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	NA	False	NA	-7	True	NA	NA	NA	25352390	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.19	chr17	+	2856	26	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	26	1107	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	36.5755328054152	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGAGCTACTACTTACTG	NA	False	NA	NA	False	AATAGA	-20	NA	25352390	25379823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366378_25366445_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.2	chr17	+	4738	23	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-10	2	intron_retention	FALSE	canonical	2	9	junction_15	28.7638216865654	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTATTTTTATTTTG	NA	False	NA	17	True	NA	NA	NA	25352354	25381075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.20	chr17	+	4967	23	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	26	1	intron_retention	FALSE	canonical	3	13	junction_13	27.8182189542236	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352390	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.21	chr17	+	2254	16	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	26	-3731	intron_retention	FALSE	canonical	3	118	junction_8	11.2940495640649	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAGGGAAGGGGAAAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	25352390	25374985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341
ES.14582.22	chr17	+	7138	21	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	26	0	intron_retention	FALSE	canonical	3	111	junction_8	12.5987102514503	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352390	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25370733_25371321_25371383_25371989_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.23	chr17	+	4078	26	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.133365967352	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTCCAGTATTTTTA	NA	False	NA	12	True	NA	NA	NA	25352390	25381070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25362894_25362936_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.24	chr17	+	4614	24	NIC	ENSMUSG00000036636.11	novel	4067	25	NA	NA	26	1	intron_retention	FALSE	canonical	2	12	junction_13	27.794615354815	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352390	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.25	chr17	+	5040	23	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	26	0	intron_retention	FALSE	canonical	3	118	junction_16	10.9439783057636	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352390	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.26	chr17	+	4008	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	38.1888581773387	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352391	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378676_25378761_25379103_25379185_25379418
ES.14582.27	chr17	+	3930	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	39.6703333703719	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352391	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25375708_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378445_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.28	chr17	+	4148	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	28	1	intron_retention	FALSE	canonical	3	118	junction_8	11.3123717342257	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352392	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.29	chr17	+	3867	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_16	28.3024443359142	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352392	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.3	chr17	+	4890	24	NNC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	-8	0	intron_retention	FALSE	canonical	3	13	junction_14	27.4722062674673	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352356	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.30	chr17	+	4613	24	NNC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	28	0	intron_retention	FALSE	canonical	3	13	junction_14	27.61057850478	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352392	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.31	chr17	+	3924	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	29.2088979973949	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTCCAGTATTTTTAT	NA	False	NA	13	True	NA	NA	NA	25352393	25381071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378694_25378761_25379103_25379185_25379418
ES.14582.32	chr17	+	4341	25	NNC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	28.7104498494112	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCAGTATTTTTATTT	NA	False	NA	15	True	NA	NA	NA	25352394	25381073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366378_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.33	chr17	+	2717	16	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	30	-3732	intron_retention	FALSE	canonical	3	111	junction_8	12.5616700942015	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGAAGGGAAGGGGAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	25352394	25374984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372800_25374341
ES.14582.36	chr17	+	4084	23	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	32	0	intron_retention	FALSE	canonical	2	9	junction_16	28.9130929191043	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352396	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25375774_25375827_25376113_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.37	chr17	+	4621	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	32	-2	intron_retention	FALSE	canonical	0	0	junction_19	29.9988657630575	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTATTTTTATTTTGA	NA	False	NA	18	True	NA	NA	NA	25352396	25381076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376850_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.38	chr17	+	7579	20	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	32	0	intron_retention	FALSE	canonical	3	111	junction_7	11.730349868322	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352396	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25371383_25371989_25372800_25374341_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.4	chr17	+	2807	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	1	1263	1	1099	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGACGTGAGCTACT	NA	False	NA	NA	False	AATAGA	-12	NA	25352365	25379815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.41	chr17	+	5081	23	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	33	-2	intron_retention	FALSE	canonical	3	111	junction_7	12.4330438152689	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTCCAGTATTTTTA	NA	False	NA	12	True	NA	NA	NA	25352397	25381070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.42	chr17	+	5205	22	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	33	-2	intron_retention	FALSE	canonical	2	9	junction_14	29.401821715353	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTATTTTTATTTTGA	NA	False	NA	18	True	NA	NA	NA	25352397	25381076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.44	chr17	+	5537	22	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-36	0	intron_retention	FALSE	canonical	3	118	junction_15	10.7591652644714	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352402	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25369255_25369515_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.45	chr17	+	5165	23	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-35	1	intron_retention	FALSE	canonical	3	13	junction_13	27.4599633425986	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352403	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.46	chr17	+	5595	22	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-35	0	intron_retention	FALSE	canonical	3	111	junction_8	12.2181605289838	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352403	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.48	chr17	+	4194	25	FSM	ENSMUSG00000036636.11	ENSMUST00000162862.3	4237	25	42	1	-32	0	multi-exon	FALSE	canonical	0	0	junction_15	29.4172273317675	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352406	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372534_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.49	chr17	+	6887	19	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	-18	-21	intron_retention	FALSE	canonical	3	118	junction_12	11.0665774204344	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	NA	False	NA	-7	True	NA	NA	NA	25352420	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25369581_25370089_25371383_25371989_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.5	chr17	+	6213	22	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	5	0	intron_retention	FALSE	canonical	3	118	junction_8	11.467987584098	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCAGTATTTTTATTT	NA	False	NA	15	True	NA	NA	NA	25352369	25381073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.50	chr17	+	6449	21	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-17	-21	intron_retention	FALSE	canonical	2	5	junction_13	30.9038832511385	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	NA	False	NA	-7	True	NA	NA	NA	25352421	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.51	chr17	+	4623	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-17	0	intron_retention	FALSE	canonical	2	3	junction_17	29.379982383237	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352421	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375853_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.52	chr17	+	4037	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-17	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.3165724226766	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	NA	False	NA	-7	True	NA	NA	NA	25352421	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369242_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.54	chr17	+	3894	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	38.861491234192	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352427	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378619_25378761_25379103_25379185_25379418
ES.14582.55	chr17	+	3911	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	29.9897903231998	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352432	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.56	chr17	+	6723	10	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	1	-3731	intron_retention	FALSE	canonical	3	118	junction_7	11.7672909287766	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAGGGAAGGGGAAAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	25352439	25374985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368269_25369160_25369255_25369515_25371383_25371989
ES.14582.57	chr17	+	4438	2	NNC	ENSMUSG00000036636.11	novel	3983	25	NA	NA	-83	-5264	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTGTTGTTCACTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	25355512	25360253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25357030_25357332
ES.14582.58	chr17	+	5914	22	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	-1354	-21	intron_retention	FALSE	canonical	3	111	junction_7	12.6110486777601	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	NA	False	NA	-7	True	NA	NA	NA	25363428	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.59	chr17	+	5160	22	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	-1339	1	intron_retention	FALSE	canonical	3	118	junction_6	11.7092517251838	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25363443	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.6	chr17	+	4045	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.403059884229	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352369	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371336_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.60	chr17	+	5178	18	NNC	ENSMUSG00000036636.11	novel	3983	25	NA	NA	596	0	intron_retention	FALSE	canonical	2	5	junction_10	32.7745787216346	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25365378	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.62	chr17	+	4442	18	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	1430	2	intron_retention	FALSE	canonical	3	111	junction_2	11.1721353821255	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTATTTTTATTTTG	NA	False	NA	17	True	NA	NA	NA	25366212	25381075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.63	chr17	+	3183	17	NNC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	3458	-21	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	42.3814062266697	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	1919	False	NA	-7	True	NA	NA	NA	25368240	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375853_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.64	chr17	+	4097	14	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	4403	-21	intron_retention	FALSE	canonical	3	118	junction_7	10.4099406292892	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAATCAAAATTT	2864	False	NA	-7	True	NA	NA	NA	25369185	25381051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25369255_25369515_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.65	chr17	+	5789	1	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	4414	-3731	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAGGGAAGGGGAAAAA	2875	False	NA	NA	False	ATTAAA	-10	NA	25369196	25374985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25369200_25375000
ES.14582.66	chr17	+	3761	7	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	4736	-824	intron_retention	FALSE	canonical	3	119	junction_5	5.82380173655205	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	186	False	NA	NA	False	NA	NA	NA	25369518	25377892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25369581_25370089_25370207_25370677_25371383_25371989_25372800_25374341_25374512_25375774_25376242_25376462
ES.14582.67	chr17	+	4034	11	NIC	ENSMUSG00000036636.11	novel	3983	25	NA	NA	5251	0	intron_retention	FALSE	canonical	0	0	junction_6	41.4980722443826	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	701	False	NA	14	True	NA	NA	NA	25370033	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.68	chr17	+	2713	12	NIC	ENSMUSG00000036636.11	novel	4067	25	NA	NA	5893	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	49.1015140060462	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTCCAGTATTTTTA	52	False	NA	12	True	NA	NA	NA	25370675	25381070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25370729_25371321_25371383_25371989_25372129_25372705_25372800_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.69	chr17	+	1734	1	NIC	ENSMUSG00000036636.11	novel	4237	25	NA	NA	-1382	-736	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGAAAGGAA	5623	False	NA	NA	False	NA	NA	NA	25376246	25377980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25376200_25378000
ES.14582.7	chr17	+	4123	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	28.4428032295615	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352369	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.8	chr17	+	4892	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	5	1	intron_retention	FALSE	canonical	3	111	junction_7	12.1627277808041	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTATTTTTATTTT	NA	False	NA	16	True	NA	NA	NA	25352369	25381074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14582.9	chr17	+	4056	25	NNC	ENSMUSG00000036636.11	novel	4067	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	43.6820702793365	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCAGTATTTTTATT	NA	False	NA	14	True	NA	NA	NA	25352369	25381072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370729_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375853_25376126_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ES.14583.1	chr17	-	631	1	Intergenic	novelGene_12220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	4783	False	NA	NA	False	NA	NA	NA	25403423	25402792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25402800_25403400
ES.14584.1	chr17	+	1386	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	-12	1656	-12	-1656	multi-exon	FALSE	canonical	3	314	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGTTACA	NA	False	NA	133	True	NA	NA	NA	25403515	25404980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.10	chr17	+	2304	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	28	698	28	-698	multi-exon	FALSE	canonical	3	314	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTGTCACAGGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	25403555	25405938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.11	chr17	+	1782	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	28	1220	28	-1220	multi-exon	FALSE	canonical	3	314	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTGTTTTCAGCCCAAT	NA	False	NA	NA	False	AATAGA	-18	NA	25403555	25405416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.12	chr17	+	941	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	36	2132	36	-2132	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACTCAATTTTCTCAC	NA	False	NA	9	True	AATACA	-14	NA	25403563	25404504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25404500
ES.14584.13	chr17	+	2012	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	36	1061	36	-1061	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGTTAACGTAACTG	NA	False	NA	5	True	AATAAA	-18	NA	25403563	25405575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25405600
ES.14584.14	chr17	+	2152	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	38	919	38	-919	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTAGGTTCTGGGAA	NA	False	NA	NA	False	NA	NA	NA	25403565	25405717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25405700
ES.14584.15	chr17	+	2425	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	38	646	38	-646	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCTTTGCCCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	25403565	25405990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25406000
ES.14584.16	chr17	+	1534	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	38	1537	38	-1537	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCTTTCTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	25403565	25405099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25405100
ES.14584.17	chr17	+	1845	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	43	1221	43	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATTGTTTTCAGCCCAA	NA	False	NA	NA	False	AATAGA	-17	NA	25403570	25405415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403600_25405400
ES.14584.18	chr17	+	1117	3	NNC	ENSMUSG00000067722.5	novel	3030	2	NA	NA	46	-698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	157	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTGTCACAGGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	25403573	25405938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25403615_25403693_25404496_25405664
ES.14584.19	chr17	+	1602	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	1247	260	1247	-260	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTAAGTTAACTTCAGG	NA	False	NA	NA	False	ATTAAA	-11	NA	25404774	25406376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25404800_25406400
ES.14584.2	chr17	+	1344	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	0	1765	0	-1765	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTCTGTC	NA	False	NA	24	True	AATATA	-15	NA	25403527	25404871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403500_25404900
ES.14584.3	chr17	+	904	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	3	2123	3	-2123	multi-exon	FALSE	canonical	3	314	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCACCTCCCCTTT	NA	False	NA	18	True	AATACA	-23	NA	25403530	25404513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.4	chr17	+	1265	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	3	1762	3	-1762	multi-exon	FALSE	canonical	3	314	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTCTGTCTTT	NA	False	NA	27	True	AATATA	-18	NA	25403530	25404874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.5	chr17	+	1483	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	8	1539	8	-1539	multi-exon	FALSE	canonical	3	314	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTCTGCTTTCTCGTTT	NA	False	NA	NA	False	NA	NA	NA	25403535	25405097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.6	chr17	+	3018	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	13	-1	13	1	multi-exon	FALSE	canonical	3	314	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTATGTCTCTCTGTTAA	NA	False	NA	NA	False	AATATA	-17	NA	25403540	25406637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14584.7	chr17	+	2268	2	NNC	ENSMUSG00000067722.5	novel	3030	2	NA	NA	17	-698	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTGTCACAGGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	25403544	25405938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25403597_25403722
ES.14584.8	chr17	+	3084	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	18	7	18	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACCGTGTATGTCTC	NA	False	NA	NA	False	AATATA	-9	NA	25403545	25406629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403500_25406600
ES.14584.9	chr17	+	1963	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	21	1046	21	-1046	multi-exon	FALSE	canonical	3	314	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGACGCTTACAAAATTA	NA	False	NA	20	True	AATAAA	-33	NA	25403548	25405590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25403615_25403693
ES.14585.1	chr17	+	4602	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-50	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	15.8737623568248	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGGATCTTTGGGCA	NA	False	NA	4	True	ATTAAA	-16	NA	25407320	25453418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
ES.14585.10	chr17	+	2563	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-3	2219	-3	357	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCATGTTTTTTAATAT	NA	False	NA	NA	False	TATAAA	-19	NA	25407367	25451198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.11	chr17	+	4526	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	15.8774895545931	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407367	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25450685
ES.14585.12	chr17	+	4591	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.8446928597839	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTGTCTGGATCTTT	NA	False	NA	-1	True	ATTAAA	-11	NA	25407367	25453413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449578_25449750_25450685
ES.14585.13	chr17	+	4592	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	17.6548097608643	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407377	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.14	chr17	+	4284	13	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	19.1398362932741	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407381	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25450685
ES.14585.15	chr17	+	4721	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	15.3118934698702	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407381	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408485_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.16	chr17	+	4517	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6200964713058	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407382	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407471_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429779_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449603_25450685
ES.14585.17	chr17	+	3997	12	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.1363225381877	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407386	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25447556_25447641_25449180_25449384_25450685
ES.14585.18	chr17	+	4691	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	16.1061529629302	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407440	25453417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449512_25449750_25450685
ES.14585.19	chr17	+	4377	13	NNC	ENSMUSG00000015127.15	novel	745	5	NA	NA	205	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0189450688872	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407575	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407780_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25447556_25447641_25449180_25449384_25449494_25449750_25450685
ES.14585.2	chr17	+	4762	16	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.2730529763858	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407344	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25421958_25422021_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.20	chr17	+	4886	15	NNC	ENSMUSG00000015127.15	novel	745	5	NA	NA	205	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.2957362646848	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407575	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407780_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.21	chr17	+	4582	14	NNC	ENSMUSG00000015127.15	novel	745	5	NA	NA	226	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0328005321415	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTCTGGATCTTTG	NA	False	NA	0	True	ATTAAA	-12	NA	25407596	25453414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407780_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.22	chr17	+	4403	13	NNC	ENSMUSG00000015127.15	novel	745	5	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.0231885369338	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407617	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407822_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25450685
ES.14585.23	chr17	+	5053	15	FSM	ENSMUSG00000015127.15	ENSMUST00000160896.8	4787	15	-266	0	251	0	multi-exon	FALSE	canonical	1	2	junction_1	16.0955374725609	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407621	25453417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25407992_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.24	chr17	+	1649	6	NIC	ENSMUSG00000015127.15	novel	3414	5	NA	NA	-139	400	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	22.1954950384081	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTGAACTTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	25441373	25451241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25441697_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.25	chr17	+	3790	6	NIC	ENSMUSG00000015127.15	novel	3414	5	NA	NA	-106	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	22.1954950384081	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25441406	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25441697_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.26	chr17	+	3498	5	FSM	ENSMUSG00000015127.15	ENSMUST00000015271.12	3414	5	-86	2	-43	-2	multi-exon	FALSE	canonical	2	5	junction_2	29.3459963197708	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTCTGGATCTTTG	NA	False	NA	0	True	ATTAAA	-12	NA	25441469	25453414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25441697_25447556_25447641_25449180_25449384_25449494_25449750_25450685
ES.14585.27	chr17	+	3473	5	NIC	ENSMUSG00000015127.15	novel	3414	5	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	15.039531242695	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25441470	25453417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25441697_25447556_25447641_25448212_25448441_25449180_25449384_25450685
ES.14585.3	chr17	+	4804	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-26	1	-26	0	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407344	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14585.4	chr17	+	3792	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	19.6422077814744	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407348	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685_25450868_25451647
ES.14585.5	chr17	+	4699	16	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.3599833541342	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGATCTTTGG	NA	False	NA	1	True	ATTAAA	-13	NA	25407350	25453415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25421958_25422021_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449654_25449750_25450685
ES.14585.7	chr17	+	5828	13	ISM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	-3	1	-3	0	intron_retention	FALSE	canonical	3	27	junction_1	10.5039675043925	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407367	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180
ES.14585.8	chr17	+	4698	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	15.7207778796998	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407367	25453417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449578_25449750_25450685
ES.14585.9	chr17	+	4678	15	NNC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.2957362646848	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGGATCTTTGGG	NA	False	NA	2	True	ATTAAA	-14	NA	25407367	25453416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25407467_25408542_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ES.14586.1	chr17	+	1588	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	-394	-2	-394	2	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGCTTTGTACGTGGCT	4209	False	NA	30	True	AATAAA	-20	NA	25458749	25461774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.10	chr17	+	2211	3	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	22	-1	intron_retention	FALSE	canonical	3	19	junction_1	206.5	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4625	False	NA	27	True	AATAAA	-17	NA	25459165	25461771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459320_25459417_25460836_25461132
ES.14586.11	chr17	+	1792	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	30	-1	intron_retention	FALSE	canonical	3	382	junction_1	20.757863302587	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4633	False	NA	27	True	AATAAA	-17	NA	25459173	25461771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459339_25459417_25460232_25460661_25460836_25461132
ES.14586.12	chr17	+	1381	5	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	30	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	177.590117968315	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTATGGGTTGCTTTGTAC	4633	False	NA	24	True	AATAAA	-14	NA	25459173	25461768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459336_25459422_25459638_25460037_25460232_25460661_25460836_25461132
ES.14586.13	chr17	+	1181	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	170.825525024804	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTATGGGTTGCTTTGTA	4633	False	NA	23	True	AATAAA	-13	NA	25459173	25461767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459339_25459417_25459638_25460013_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.14	chr17	+	2597	1	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	32	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4635	False	NA	28	True	AATAAA	-18	NA	25459175	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459200_25461800
ES.14586.15	chr17	+	1210	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	172.008604435941	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGTTGCTTTGTACG	4647	False	NA	25	True	AATAAA	-15	NA	25459187	25461769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459339_25459417_25459638_25459972_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.17	chr17	+	1163	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	61	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	157.796577909662	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGTTGCTTTGTACG	4664	False	NA	25	True	AATAAA	-15	NA	25459204	25461769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461392
ES.14586.18	chr17	+	1848	3	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	253	0	intron_retention	FALSE	canonical	3	432	junction_1	19.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4856	False	NA	28	True	AATAAA	-18	NA	25459396	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25460836_25461132_25461197_25461427
ES.14586.2	chr17	+	1172	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	164.613000701646	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4604	False	NA	28	True	AATAAA	-18	NA	25459144	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459320_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.3	chr17	+	1158	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	166.883672059312	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4615	False	NA	27	True	AATAAA	-17	NA	25459155	25461771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459339_25459417_25459617_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.4	chr17	+	1112	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	166.386598017989	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4618	False	NA	27	True	AATAAA	-17	NA	25459158	25461771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461427
ES.14586.5	chr17	+	1656	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	15	0	intron_retention	FALSE	canonical	3	415	junction_1	23.4426012966897	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4618	False	NA	28	True	AATAAA	-18	NA	25459158	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.6	chr17	+	1557	5	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	16	0	intron_retention	FALSE	canonical	3	19	junction_1	183.138438073497	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4619	False	NA	28	True	AATAAA	-18	NA	25459159	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25459320_25459417_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.7	chr17	+	1252	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	375	junction_1	34.4700957352892	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4622	False	NA	28	True	AATAAA	-18	NA	25459162	25461772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ES.14586.8	chr17	+	887	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	190.46317812696	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGTTGCTTTGTACGT	4622	False	NA	26	True	AATAAA	-16	NA	25459162	25461770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459339_25460037_25460232_25460661_25460836_25461427
ES.14586.9	chr17	+	1999	4	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	22	-1	intron_retention	FALSE	canonical	3	382	junction_1	36.4264860903284	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTTGCTTTGTACGTG	4625	False	NA	27	True	AATAAA	-17	NA	25459165	25461771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25459339_25459417_25460836_25461132_25461197_25461427
ES.14587.1	chr17	-	156	1	Intergenic	novelGene_12221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATTAAAAATAAAAAT	10006	False	NA	NA	False	NA	NA	NA	25423748	25423592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25423600_25423700
ES.14588.1	chr17	-	175	1	Intergenic	novelGene_12222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCCATATACATA	NA	False	NA	NA	False	NA	NA	NA	25436301	25436126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25436100_25436300
ES.14589.1	chr17	-	2232	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-10	-988	-2	2	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTTTATATCTAGT	NA	False	NA	NA	False	ATTAAA	-24	NA	25459100	25452302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.10	chr17	-	1168	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-26	92	-18	-92	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTCCATGACTT	NA	False	NA	-7	True	AATAAA	-32	NA	25459116	25453382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.12	chr17	-	1212	10	NIC	ENSMUSG00000035521.14	novel	2249	11	NA	NA	0	-100	intron_retention	FALSE	canonical	3	143	junction_5	13.752665286014	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTGATAAAAAATAACTC	NA	False	NA	-15	True	AATAAA	-24	NA	25459098	25453390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.13	chr17	-	1140	11	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-12	-102	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	51.0294032886923	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATACTGATAAAAAATAAC	NA	False	NA	-17	True	AATAAA	-22	NA	25459110	25453392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453864_25453953_25454074_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.14	chr17	-	3368	4	NIC	ENSMUSG00000035521.14	novel	2249	11	NA	NA	2089	-106	intron_retention	FALSE	canonical	3	143	junction_2	8.48528137423857	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25457001	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453864_25453953_25454086_25454155_25454602_25454678
ES.14589.15	chr17	-	1468	7	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-16	-106	intron_retention	FALSE	canonical	3	143	junction_3	16.1314048434171	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25459114	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458946_25459033
ES.14589.16	chr17	-	1239	9	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	1	-106	intron_retention	FALSE	canonical	2	3	junction_7	56.7911469773238	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25459089	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454885_25458748_25458792_25458887_25458946_25459033
ES.14589.17	chr17	-	1264	9	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	1	-106	intron_retention	FALSE	canonical	3	143	junction_5	14.4865239101725	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25459089	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.18	chr17	-	3862	4	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	1588	-106	intron_retention	FALSE	canonical	3	156	junction_2	9.41629792788369	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25457502	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453864_25453953_25454239_25454318_25454434_25454507
ES.14589.19	chr17	-	1477	7	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-16	-106	intron_retention	TRUE	non_canonical	0	0	junction_4	66.5726420285891	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCCATACTGATAAAAAA	NA	False	NA	-21	True	AATAAA	-18	NA	25459114	25453396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453864_25453953_25454434_25454507_25454639_25454678_25454885_25458748_25458946_25459033
ES.14589.2	chr17	-	2250	11	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.78863514053	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTTTATATCTAGT	NA	False	NA	NA	False	ATTAAA	-24	NA	25459100	25452302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453882_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.3	chr17	-	2205	11	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.2847013953413	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTTTATATCTAGT	NA	False	NA	NA	False	ATTAAA	-24	NA	25459105	25452302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453665_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.4	chr17	-	1492	8	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-16	26	intron_retention	FALSE	canonical	3	143	junction_5	15.3476714979232	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCTGGGTTAAGAAGAT	NA	False	NA	NA	False	AGTAAA	-22	NA	25459114	25453264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454885_25458748_25458946_25459033
ES.14589.5	chr17	-	1284	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-24	-26	-16	26	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCTGGGTTAAGAAGAT	NA	False	NA	NA	False	AGTAAA	-22	NA	25459114	25453264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.6	chr17	-	1262	11	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	52.1813184961821	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACCATCTGGGTTAAGAA	NA	False	NA	NA	False	AGTAAA	-19	NA	25459100	25453267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458937_25459029
ES.14589.7	chr17	-	1228	11	NNC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-18	19	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	49.5807422292164	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGACCATCTGGGTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	25459116	25453271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25453697_25453781_25453864_25453953_25454035_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.14589.8	chr17	-	1546	7	NIC	ENSMUSG00000035521.14	novel	2249	11	NA	NA	0	19	intron_retention	FALSE	canonical	3	156	junction_3	11.9128781856723	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGACCATCTGGGTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	25459098	25453271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454885_25458748_25458946_25459033
ES.14589.9	chr17	-	1329	10	NIC	ENSMUSG00000035521.14	novel	1234	11	NA	NA	-1	16	intron_retention	FALSE	canonical	3	143	junction_5	13.752665286014	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATATGACCATCTGGG	NA	False	NA	NA	False	AGTAAA	-12	NA	25459099	25453274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25453697_25453781_25453864_25453953_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ES.1459.1	chr1	+	179	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGCAGTACAGG	NA	False	NA	NA	False	NA	NA	NA	136130292	136130471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136130300_136130500
ES.14590.1	chr17	-	3252	19	NIC	ENSMUSG00000047507.13	novel	4645	34	NA	NA	-29	0	intron_retention	TRUE	canonical	0	0	junction_1	0.730719246553661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGTCGTTTCTTGA	NA	False	NA	1	True	NA	NA	NA	25467130	25461632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25462716_25462795_25463002_25463079_25463204_25463282_25463404_25463484_25463566_25463726_25463799_25464110_25464370_25464455_25464525_25464612_25464805_25464907_25465001_25465086_25465231_25465303_25465428_25465531_25465663_25465777_25465830_25465931_25466030_25466110_25466168_25466283_25466375_25466457_25466583_25467000
ES.14590.2	chr17	-	4562	34	FSM	ENSMUSG00000047507.13	ENSMUST00000182056.8	4645	34	82	1	-1	-1	multi-exon	TRUE	canonical	0	0	junction_1	0.693668069227855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTCTGTCGTTTCTTG	NA	False	NA	0	True	NA	NA	NA	25475256	25461633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25462716_25462795_25463002_25463079_25463204_25463282_25463404_25463484_25463566_25463726_25463799_25464110_25464220_25464289_25464370_25464455_25464525_25464612_25464805_25464907_25465001_25465086_25465231_25465303_25465428_25465531_25465663_25465777_25465830_25465931_25466030_25466110_25466168_25466283_25466375_25466457_25466583_25467000_25467122_25467244_25467349_25467445_25467542_25467629_25467738_25468061_25468165_25468288_25468367_25468488_25468534_25469056_25469253_25469366_25469434_25469569_25469630_25470074_25470183_25470411_25470493_25470705_25470794_25470984_25471119_25475134
ES.14591.1	chr17	-	2959	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-338	-1797	-5	1407	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGGTTGTGTCCTCTG	4258	False	NA	0	True	ATTAAA	-20	NA	25492846	25479482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.11	chr17	-	6707	1	Genic_Genomic	ENSMUSG00000015120.16	novel	NA	NA	NA	NA	-1348	1405	mono-exon	FALSE	NA	NA	NA	NA	NA	1239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	NA	False	NA	-2	True	ATTAAA	-18	NA	25486191	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_25479500_25486200
ES.14591.12	chr17	-	6267	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-3	1405	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4260	False	NA	-2	True	ATTAAA	-18	NA	25492844	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.13	chr17	-	2540	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	3	-1405	3	1405	multi-exon	TRUE	canonical	3	77	junction_6	1792.78505404301	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	3823	False	NA	-2	True	ATTAAA	-18	NA	25493281	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ES.14591.14	chr17	-	6284	6	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	25	-1410	25	1405	intron_retention	FALSE	canonical	3	4553	junction_4	236.966326721752	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4772	False	NA	-2	True	ATTAAA	-18	NA	25492332	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376
ES.14591.15	chr17	-	2547	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-18	1405	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	1812.02422874407	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4729	False	NA	-2	True	ATTAAA	-18	NA	25492375	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492233
ES.14591.17	chr17	-	5383	2	FSM	ENSMUSG00000015120.16	ENSMUST00000172569.2	594	2	-828	-3961	-298	1404	multi-exon	FALSE	canonical	3	5148	junction_1	0	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTCGGGTTGTGTCCT	NA	False	NA	-3	True	ATTAAA	-17	NA	25485141	25479485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25483820_25484092
ES.14591.19	chr17	-	2632	8	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-38	1403	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_7	2154.26616133605	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTCGGGTTGTGTCC	4709	False	NA	-4	True	ATTAAA	-16	NA	25492395	25479486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491640_25492294
ES.14591.2	chr17	-	3211	8	FSM	ENSMUSG00000015120.16	ENSMUST00000172618.8	1559	8	17	-1669	17	1406	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4233	False	NA	-1	True	ATTAAA	-19	NA	25492871	25479483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ES.14591.20	chr17	-	5823	6	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	1	1403	intron_retention	FALSE	canonical	3	247	junction_5	1877.06990812809	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTCGGGTTGTGTCC	4541	False	NA	-4	True	ATTAAA	-16	NA	25492563	25479486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.21	chr17	-	2981	8	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	34	1401	combination_of_known_junctions	FALSE	canonical	1	5	junction_7	2170.45023073132	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGCCCTCGGGTTGTGT	4297	False	NA	-6	True	ATTAAA	-14	NA	25492807	25479488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492455
ES.14591.22	chr17	-	6978	6	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	63	1399	intron_retention	FALSE	canonical	3	133	junction_5	1922.40260091376	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCAGCCCTCGGGTTGT	4326	False	NA	-8	True	ATTAAA	-12	NA	25492778	25479490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25491511
ES.14591.23	chr17	-	1587	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-352	-411	-19	21	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATGTGAGGAGGTAT	4244	False	NA	NA	False	AATAAA	-35	NA	25492860	25480868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.24	chr17	-	4894	6	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	14	-9	14	4	intron_retention	FALSE	canonical	3	4553	junction_4	236.966326721752	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	4761	False	NA	NA	False	AATAAA	-18	NA	25492343	25480885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376
ES.14591.25	chr17	-	1403	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	4250	False	NA	NA	False	AATAAA	-18	NA	25492854	25480885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.26	chr17	-	4865	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-2	4	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	4261	False	NA	NA	False	AATAAA	-18	NA	25492843	25480885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.27	chr17	-	1150	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	3	-263	3	4	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	3823	False	NA	NA	False	AATAAA	-18	NA	25493281	25480885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.28	chr17	-	1043	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1800.08340084564	1229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCATTATCATCATT	4720	False	NA	NA	False	AATAAA	-18	NA	25492384	25480885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484152_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.3	chr17	-	5839	6	NIC	ENSMUSG00000015120.16	novel	890	7	NA	NA	20	1406	intron_retention	FALSE	canonical	3	206	junction_5	1893.37229302639	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	3848	False	NA	-1	True	ATTAAA	-19	NA	25493256	25479483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.30	chr17	-	1070	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	1766.93640236427	1228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTGCATTATCATC	4731	False	NA	NA	False	AATAAA	-15	NA	25492373	25480888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488240_25488376_25488454_25492294
ES.14591.31	chr17	-	8231	3	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	2159	1	intron_retention	FALSE	canonical	3	4553	junction_2	297.5	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTGCATTATCATC	7134	False	NA	NA	False	AATAAA	-15	NA	25489970	25480888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25483820_25484092_25487588_25488165
ES.14591.32	chr17	-	7369	3	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-14	1	intron_retention	FALSE	canonical	3	4214	junction_2	467	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTGCATTATCATC	4733	False	NA	NA	False	AATAAA	-15	NA	25492371	25480888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25483820_25484092_25488454_25492294
ES.14591.33	chr17	-	4700	6	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	247	junction_5	1877.06990812809	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	4261	False	NA	NA	False	AATAAA	-14	NA	25492843	25480889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.34	chr17	-	4458	6	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	206	junction_5	1893.37229302639	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	3823	False	NA	NA	False	AATAAA	-14	NA	25493281	25480889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.35	chr17	-	6661	5	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	4214	junction_4	383.03157506921	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTTGTTGCATTATC	4733	False	NA	NA	False	AATAAA	-12	NA	25492371	25480891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.37	chr17	-	1511	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	-223	-2	-6	2	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	4524	False	NA	NA	False	AATAAA	-11	NA	25492580	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ES.14591.38	chr17	-	1133	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	2	3	2	2	multi-exon	FALSE	canonical	3	77	junction_6	1792.78505404301	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	3822	False	NA	NA	False	AATAAA	-11	NA	25493282	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ES.14591.39	chr17	-	1232	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_1	1772.2953729243	1228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	4566	False	NA	NA	False	AATAAA	-11	NA	25492538	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481457_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.4	chr17	-	2552	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	3	-1665	3	1406	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	3823	False	NA	-1	True	ATTAAA	-19	NA	25493281	25479483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.41	chr17	-	5642	6	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-3	2	intron_retention	FALSE	canonical	3	133	junction_5	1922.40260091376	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	4260	False	NA	NA	False	AATAAA	-11	NA	25492844	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25491511
ES.14591.43	chr17	-	1240	8	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	2398.45402588536	1228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	4744	False	NA	NA	False	AATAAA	-11	NA	25492360	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484152_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ES.14591.44	chr17	-	4640	1	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-689	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTGCATTAT	NA	False	NA	NA	False	AATAAA	-11	NA	25485532	25480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25480900_25485500
ES.14591.45	chr17	-	1090	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1806.32072333668	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTTTTTGTTGCATTA	4724	False	NA	NA	False	AATAAA	-10	NA	25492380	25480893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484211_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.46	chr17	-	1001	6	NIC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1893.69169613219	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4694	False	NA	NA	False	AATAAA	-9	NA	25492410	25480894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.47	chr17	-	1029	7	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_6	1815.7244116024	1228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	3803	False	NA	NA	False	AATAAA	-9	NA	25493301	25480894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493267
ES.14591.48	chr17	-	1327	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	-368	-135	12	4	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTAGTTTCTTTGCGT	4228	False	NA	NA	False	GATAAA	-23	NA	25492876	25481144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.49	chr17	-	4607	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-9	2	intron_retention	FALSE	canonical	3	4214	junction_5	346.443068916092	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTAGCAGCTAGTTTCT	4254	False	NA	NA	False	GATAAA	-17	NA	25492850	25481150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.5	chr17	-	5870	6	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-28	1406	intron_retention	FALSE	canonical	3	25	junction_5	1965.36077095275	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4719	False	NA	-1	True	ATTAAA	-19	NA	25492385	25479483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492233
ES.14591.50	chr17	-	884	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	2	4	2	0	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	3822	False	NA	NA	False	GATAAA	-15	NA	25493282	25481152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.51	chr17	-	4434	6	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	247	junction_5	1877.06990812809	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCCCTAGCAGCTAGTT	4263	False	NA	NA	False	GATAAA	-14	NA	25492841	25481153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.52	chr17	-	4170	6	NIC	ENSMUSG00000015120.16	novel	890	7	NA	NA	19	-1	intron_retention	FALSE	canonical	3	206	junction_5	1893.37229302639	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCCCTAGCAGCTAGTT	3847	False	NA	NA	False	GATAAA	-14	NA	25493257	25481153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25493135
ES.14591.53	chr17	-	4251	5	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	4214	junction_4	349.681640924999	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCCCTAGCAGCTAGTT	4734	False	NA	NA	False	GATAAA	-14	NA	25492370	25481153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488454_25492294
ES.14591.54	chr17	-	1088	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-19	-54	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4244	False	NA	NA	False	AGTAAA	-16	NA	25492860	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.55	chr17	-	2012	7	ISM	ENSMUSG00000015120.16	ENSMUST00000172618.8	1559	8	48	54	1	-54	intron_retention	FALSE	canonical	3	133	junction_6	1772.06935686941	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4264	False	NA	NA	False	AGTAAA	-16	NA	25492840	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511
ES.14591.56	chr17	-	901	8	NNC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-27	-54	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_7	2154.26616133605	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4720	False	NA	NA	False	AGTAAA	-16	NA	25492384	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491640_25492294
ES.14591.57	chr17	-	937	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	37	312	37	-54	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4784	False	NA	NA	False	AGTAAA	-16	NA	25492320	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ES.14591.58	chr17	-	708	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-13	-54	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1800.08340084564	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4734	False	NA	NA	False	AGTAAA	-16	NA	25492370	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484152_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.59	chr17	-	3004	2	ISM	ENSMUSG00000015120.16	ENSMUST00000174216.8	1144	3	-1641	54	-1641	-54	intron_retention	FALSE	canonical	3	4875	junction_1	0	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	25486484	25481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25481466_25483739
ES.14591.60	chr17	-	799	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	20	319	12	-56	multi-exon	FALSE	canonical	3	77	junction_6	1792.78505404301	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATTGATGTCAGTATT	3840	False	NA	NA	False	AGTAAA	-14	NA	25493264	25481208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ES.14591.61	chr17	-	6554	1	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	-27	-290	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCCTAGGGGATTTGACA	4720	False	NA	NA	False	NA	NA	NA	25492384	25485830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25485800_25492400
ES.14591.62	chr17	-	3183	1	NIC	ENSMUSG00000015120.16	novel	1559	8	NA	NA	-8	-807	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCAGGTGGTAGCCAG	4739	False	NA	NA	False	ATTAAA	-30	NA	25492365	25489182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25489200_25492400
ES.14591.7	chr17	-	2793	7	NIC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-2	1405	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4261	False	NA	-2	True	ATTAAA	-18	NA	25492843	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
ES.14591.8	chr17	-	2607	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	17	1405	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1800.08340084564	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4557	False	NA	-2	True	ATTAAA	-18	NA	25492547	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484152_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14591.9	chr17	-	2656	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	-13	1405	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	1798.24902490049	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCGGGTTGTGTCCTC	4734	False	NA	-2	True	ATTAAA	-18	NA	25492370	25479484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25481466_25483739_25483820_25484092_25484378_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ES.14592.1	chr17	+	2283	1	Intergenic	novelGene_12223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTTGAGTCTGGGGTA	NA	False	NA	NA	False	NA	NA	NA	25501319	25503602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25501300_25503600
ES.14593.1	chr17	+	179	1	Intergenic	novelGene_12224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACCAAA	816	False	NA	NA	False	NA	NA	NA	25575238	25575417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25575200_25575400
ES.14594.1	chr17	+	786	3	NIC	ENSMUSG00000033200.17	novel	1040	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTGAGCCTGACAGCCT	9049	False	NA	NA	False	CATAAA	-19	NA	25588234	25593414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25588392_25592698_25592845_25592931
ES.14595.1	chr17	-	7816	34	ISM	ENSMUSG00000024112.17	ENSMUST00000078496.12	8220	35	697	-10	192	0	3prime_fragment	FALSE	non_canonical	0	0	junction_6	0.913122374140568	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTGGTTGCTACACC	NA	False	NA	NA	False	AATAAA	-24	NA	25652060	25593258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25595121_25595819_25595981_25596144_25596314_25596405_25596652_25596735_25596858_25597754_25597834_25599198_25599270_25599493_25599628_25599777_25599888_25600395_25600548_25602046_25602240_25602427_25602518_25602620_25602747_25602935_25603063_25603240_25603426_25603519_25603589_25603668_25603793_25603952_25604054_25604534_25604958_25605943_25606153_25606452_25606544_25606718_25606875_25607018_25607137_25607535_25607722_25608311_25608464_25610062_25610503_25610794_25611585_25612484_25612578_25612702_25613019_25614311_25614472_25616234_25616333_25616494_25616629_25616707_25616820_25651843
ES.14596.1	chr17	-	1551	4	Intergenic	novelGene_12225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGGATCGATTCTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	25733186	25667816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_25669020_25684170_25684289_25692642_25692743_25733056
ES.14596.2	chr17	-	2734	3	NNC	ENSMUSG00000050824.13	novel	2733	3	NA	NA	-16960	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCTTTTCCAAAGCAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	25733222	25708846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25711263_25714000_25714153_25733056
ES.14596.3	chr17	-	2561	2	NNC	ENSMUSG00000050824.13	novel	2506	2	NA	NA	-16942	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTCTTTTCCAAAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	25733204	25708849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25711263_25733056
ES.14597.1	chr17	+	3655	2	ISM	ENSMUSG00000091475.5	ENSMUST00000235022.2	1164	3	382	11	307	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTCTGTCCTGCA	3563	False	NA	2	True	AATAAA	-5	NA	25790162	25793997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25793507_25793686
ES.14598.1	chr17	+	1579	9	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	53.0799809250154	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCTCTACCTATAC	NA	False	NA	1	True	AATAAA	-12	NA	25798148	25881694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.10	chr17	+	2157	3	ISM	ENSMUSG00000002279.20	ENSMUST00000141606.3	2003	10	75840	-1177	75605	1177	3prime_fragment	FALSE	canonical	3	110	junction_1	13.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	8327	False	NA	NA	False	NA	NA	NA	25873898	25876630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25874216_25874358_25874543_25874974
ES.14598.11	chr17	+	7436	2	Genic_Genomic	ENSMUSG00000002279.20	novel	1861	11	NA	NA	80006	4145	multi-exon	TRUE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTTCGGGGGCTGGA	2785	False	NA	NA	False	AATAAA	-31	NA	25878299	25885945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_25878313_25878522
ES.14598.2	chr17	+	1857	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1949858219166	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTGTCTCTATCCGT	NA	False	NA	111	True	NA	NA	NA	25798148	25881804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.3	chr17	+	1415	9	FSM	ENSMUSG00000002279.20	ENSMUST00000137201.8	1424	9	6	3	-4	-3	multi-exon	FALSE	canonical	3	5	junction_1	39.6917812651435	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCTCTACCTATAC	NA	False	NA	1	True	AATAAA	-12	NA	25798166	25881694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25798354_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.4	chr17	+	1725	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1949858219166	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCTCTACCTATAC	NA	False	NA	1	True	AATAAA	-12	NA	25798170	25881694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.5	chr17	+	1730	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.1949858219166	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGCTTCTCTACCTATA	NA	False	NA	0	True	AATAAA	-11	NA	25798172	25881693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25798354_25804516_25804831_25831261_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.6	chr17	+	2980	9	NNC	ENSMUSG00000002279.20	novel	2003	10	NA	NA	50	1148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.6224368256169	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25798222	25876601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974
ES.14598.7	chr17	+	5698	10	NNC	ENSMUSG00000002279.20	novel	1861	11	NA	NA	6336	4145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.7454265523163	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAACTTCGGGGGCTGGA	1231	False	NA	NA	False	AATAAA	-31	NA	25804629	25885945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25804827_25831269_25831419_25850708_25850775_25864122_25864291_25865472_25865601_25873499_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.8	chr17	+	1321	9	NNC	ENSMUSG00000002279.20	novel	2003	10	NA	NA	14228	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.2126725049468	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCTCTACCTATAC	3391	False	NA	1	True	AATAAA	-12	NA	25812521	25881694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25812615_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ES.14598.9	chr17	+	2422	1	NIC	ENSMUSG00000002279.20	novel	2769	4	NA	NA	14777	-2038	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTATGTCCACAGGCTG	3940	False	NA	NA	False	NA	NA	NA	25813070	25815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25813100_25815500
ES.14599.1	chr17	+	358	3	FSM	ENSMUSG00000025739.14	ENSMUST00000172002.8	719	3	39	322	39	-3	multi-exon	FALSE	canonical	2	6	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTTTAGTCCATT	NA	False	NA	13	True	TATAAA	-15	NA	25936183	25938058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25936252_25937640_25937773_25937900
ES.14599.2	chr17	+	380	3	FSM	ENSMUSG00000025739.14	ENSMUST00000115108.4	347	3	-32	-1	-32	1	multi-exon	FALSE	canonical	2	3	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTAGTCCATTCCCT	NA	False	NA	17	True	TATAAA	-19	NA	25936469	25938062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25936556_25937640_25937773_25937900
ES.146.1	chr1	+	158	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGAGGAGAAGCTTAA	NA	False	NA	NA	False	NA	NA	NA	16373825	16373983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16373800_16374000
ES.1460.1	chr1	-	2729	10	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	40	11	combination_of_known_junctions	TRUE	canonical	2	6	junction_9	17.8954439335895	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGCTGAGTTG	NA	False	NA	-2	True	AATAAA	-31	NA	136161817	136141257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155316_136161640
ES.1460.10	chr1	-	1183	1	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	180	-6543	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTGCACAGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	136161677	136160494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136160500_136161700
ES.1460.2	chr1	-	2179	6	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	59	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	25.7262511843448	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGTGTGTGCTGAGT	NA	False	NA	-4	True	AATAAA	-29	NA	136161798	136141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136161640
ES.1460.3	chr1	-	3993	10	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	40	8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	16.431676725155	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGTGTGTGCTGAG	NA	False	NA	-5	True	AATAAA	-28	NA	136161817	136141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136160458
ES.1460.4	chr1	-	3153	11	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	180	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.7459087527615	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTGTGTGTGTGCT	NA	False	NA	-8	True	AATAAA	-25	NA	136161677	136141263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136142157_136143493_136144179_136147460_136147632_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136160458_136160947_136161640
ES.1460.5	chr1	-	2641	10	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	179	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.6288168907019	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTGTGTGTGTGCT	NA	False	NA	-8	True	AATAAA	-25	NA	136161678	136141263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136142157_136143493_136144179_136147460_136147632_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136153982_136154517_136154643_136155251_136155401_136161640
ES.1460.6	chr1	-	4471	10	NIC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	-1450	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	19.6738844256812	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTGTGTGTGTGCT	NA	False	NA	-8	True	AATAAA	-25	NA	136159498	136141263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136157658
ES.1460.7	chr1	-	2792	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	201	-5	56	5	multi-exon	FALSE	canonical	3	39	junction_9	8.93736780097342	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTGTGTGTGTGCT	NA	False	NA	-8	True	AATAAA	-25	NA	136161801	136141263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
ES.1460.8	chr1	-	1531	3	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	181	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGAAGGATTCTGTGTG	NA	False	NA	-14	True	AATAAA	-19	NA	136161676	136141269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136142157_136143493_136144102_136161640
ES.1460.9	chr1	-	3247	10	NNC	ENSMUSG00000041605.17	novel	2988	10	NA	NA	211	-564	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	21.2132034355964	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTGGCCTTTTGGACT	NA	False	NA	NA	False	NA	NA	NA	136161646	136141832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136142157_136143493_136144179_136147460_136147632_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136160458
ES.14600.1	chr17	-	3684	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-9	-467	0	467	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGCAAACTTTCCGTT	5674	False	NA	NA	False	GGGGCT	-8	NA	25946393	25937432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.10	chr17	-	3226	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-10	-8	-1	8	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTCAGTGAGTGTCG	5673	False	NA	NA	False	NA	NA	NA	25946394	25937891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.102	chr17	-	5715	13	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_12	93.7461110304493	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941213_25941619_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.104	chr17	-	4956	14	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	468	junction_13	87.188159447995	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5684	False	NA	-18	True	TATAAA	-17	NA	25946383	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25946098_25946220
ES.14600.106	chr17	-	4956	16	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	468	junction_15	85.3027549379268	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGGTCAGGCTCATA	5684	False	NA	-19	True	TATAAA	-16	NA	25946383	25938021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.108	chr17	-	4434	16	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	468	junction_15	82.3916392737893	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGGTCAGGCTCATA	5703	False	NA	-19	True	TATAAA	-16	NA	25946364	25938021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.11	chr17	-	3888	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	2	intron_retention	FALSE	canonical	3	337	junction_19	103.679802203908	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGGAGTGTCAGTGA	5683	False	NA	NA	False	NA	NA	NA	25946384	25937897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.110	chr17	-	6676	10	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	468	junction_9	107.961927445641	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5673	False	NA	-20	True	TATAAA	-15	NA	25946394	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25940258_25941064_25942526_25942616_25944609_25944715_25944769_25944853_25946098_25946220
ES.14600.111	chr17	-	4694	17	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	337	junction_16	109.719938223415	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5679	False	NA	-20	True	TATAAA	-15	NA	25946388	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.113	chr17	-	3688	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_17	179.050684165127	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5694	False	NA	-20	True	TATAAA	-15	NA	25946373	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944971_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.114	chr17	-	5009	15	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	468	junction_14	88.8814849524182	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5704	False	NA	-20	True	TATAAA	-15	NA	25946363	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.115	chr17	-	5511	16	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	1	-2	intron_retention	FALSE	canonical	3	468	junction_15	87.0436416721839	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5684	False	NA	-20	True	TATAAA	-15	NA	25946383	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25941213_25941619_25941751_25941817_25942526_25942616_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.116	chr17	-	3861	20	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	9	-2	intron_retention	FALSE	canonical	3	29	junction_12	189.332915544517	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5746	False	NA	-20	True	TATAAA	-15	NA	25946321	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.117	chr17	-	3487	19	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	-2	intron_retention	FALSE	canonical	2	20	junction_17	193.507432785436	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5683	False	NA	-20	True	TATAAA	-15	NA	25946384	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946095_25946220
ES.14600.118	chr17	-	4297	18	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	2	-2	intron_retention	TRUE	canonical	0	0	junction_1	192.9327652399	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5685	False	NA	-20	True	TATAAA	-15	NA	25946382	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938257_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942526_25942616_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.119	chr17	-	3431	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	19	-2	intron_retention	FALSE	canonical	3	337	junction_19	104.165354377699	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5702	False	NA	-20	True	TATAAA	-15	NA	25946365	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.12	chr17	-	3807	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-3	27	intron_retention	FALSE	canonical	3	468	junction_19	80.3535470329445	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGTTGTTCTTCATCA	5671	False	NA	26	True	NA	NA	NA	25946396	25937976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.120	chr17	-	3934	16	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	337	junction_15	112.583519614946	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5672	False	NA	-20	True	TATAAA	-15	NA	25946395	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.121	chr17	-	4111	18	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	-2	intron_retention	FALSE	canonical	3	468	junction_17	83.9355907288646	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5684	False	NA	-20	True	TATAAA	-15	NA	25946383	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941213_25941619_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.123	chr17	-	3054	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	184.685293394931	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5705	False	NA	-20	True	TATAAA	-15	NA	25946362	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945516_25945672_25945823_25945914_25946095_25946220
ES.14600.124	chr17	-	4296	16	NNC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	217.103109144019	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5684	False	NA	-20	True	TATAAA	-15	NA	25946383	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25943740_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.125	chr17	-	3385	20	NNC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	1	-2	intron_retention	FALSE	canonical	1	14	junction_7	275.963063087011	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5684	False	NA	-20	True	TATAAA	-15	NA	25946383	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941073_25941213_25941619_25941751_25941817_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946095_25946220
ES.14600.126	chr17	-	4179	17	NNC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_14	198.166281188299	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5712	False	NA	-20	True	TATAAA	-15	NA	25946355	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945672_25945823_25945914_25946098_25946220
ES.14600.127	chr17	-	4796	16	NIC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	337	junction_15	114.674883426533	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5680	False	NA	-20	True	TATAAA	-15	NA	25946387	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.129	chr17	-	3633	21	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	11	-2	intron_retention	FALSE	canonical	2	20	junction_19	183.623929540787	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5694	False	NA	-20	True	TATAAA	-15	NA	25946373	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946095_25946220
ES.14600.13	chr17	-	3383	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-19	25	intron_retention	FALSE	canonical	3	337	junction_20	103.014076707992	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGGGTTGTTCTTCAT	5703	False	NA	24	True	NA	NA	NA	25946364	25937978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.130	chr17	-	6165	10	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_7	259.972410691957	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGGTCAGGCTCAT	5696	False	NA	-20	True	TATAAA	-15	NA	25946371	25938022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25944609_25944715_25944769_25945348_25945823_25945914_25946098_25946220
ES.14600.132	chr17	-	3504	19	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	45	junction_6	178.206254480034	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGTGGGTCAGGCTCA	5673	False	NA	-21	True	TATAAA	-14	NA	25946394	25938023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939942_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.133	chr17	-	4339	19	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	337	junction_18	107.783862943908	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGTGGGTCAGGCTCA	5720	False	NA	-21	True	TATAAA	-14	NA	25946347	25938023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.135	chr17	-	1834	14	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-3140	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	204.435982659407	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTGTGGGTCAGGCTC	9052	False	NA	-22	True	TATAAA	-13	NA	25943015	25938024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942641_25942741_25942976
ES.14600.137	chr17	-	3591	7	NIC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	-3118	-7	intron_retention	FALSE	canonical	3	715	junction_5	37.1797435888594	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGAGTGTGGGTCAGG	9074	False	NA	-25	True	TATAAA	-10	NA	25942993	25938027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064
ES.14600.138	chr17	-	1674	7	ISM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-4	5855	-4	0	5prime_fragment	FALSE	canonical	3	468	junction_6	122.465868260871	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5679	False	NA	NA	False	NA	NA	NA	25946388	25943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.139	chr17	-	2394	3	NIC	ENSMUSG00000019214.15	novel	1613	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	337	junction_2	201.5	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5708	False	NA	NA	False	NA	NA	NA	25946359	25943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25944769_25944853_25946095_25946220
ES.14600.14	chr17	-	3676	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	16	1	intron_retention	FALSE	canonical	3	337	junction_20	102.590886534818	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGCACTTGGCCTT	5699	False	NA	0	True	TATAAA	-35	NA	25946368	25938002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.141	chr17	-	1764	6	NIC	ENSMUSG00000019214.15	novel	1613	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	337	junction_5	175.417901024952	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5678	False	NA	NA	False	NA	NA	NA	25946389	25943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25946095_25946220
ES.14600.142	chr17	-	1831	6	NIC	ENSMUSG00000019214.15	novel	1613	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	337	junction_5	183.733502660783	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5670	False	NA	NA	False	NA	NA	NA	25946397	25943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945823_25945914_25946095_25946220
ES.14600.143	chr17	-	1749	6	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	10	-18	intron_retention	FALSE	canonical	3	468	junction_5	125.518126181042	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5693	False	NA	NA	False	NA	NA	NA	25946374	25943772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.144	chr17	-	1898	5	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	-25	intron_retention	FALSE	canonical	3	468	junction_4	135.198927510539	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5673	False	NA	NA	False	NA	NA	NA	25946394	25943779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25946098_25946220
ES.14600.145	chr17	-	1618	7	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	295.269603733417	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5673	False	NA	NA	False	NA	NA	NA	25946394	25943779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945487_25945674_25945823_25945914_25946098_25946220
ES.14600.15	chr17	-	3125	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	-14	103	-14	1	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGCACTTGGCCTT	5660	False	NA	0	True	TATAAA	-35	NA	25946407	25938002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.16	chr17	-	3104	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	236.792636782623	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGCACTTGGCCTT	5673	False	NA	0	True	TATAAA	-35	NA	25946394	25938002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941745_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944767_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.17	chr17	-	3174	22	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	173.877938264076	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGCACTTGGCCTT	5684	False	NA	0	True	TATAAA	-35	NA	25946383	25938002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943145_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.18	chr17	-	5277	14	NNC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	14	junction_6	228.435636967366	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5683	False	NA	-1	True	TATAAA	-34	NA	25946384	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941073_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.20	chr17	-	3660	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	30	junction_6	172.355765786933	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5673	False	NA	-1	True	TATAAA	-34	NA	25946394	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940214_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.22	chr17	-	4652	18	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-17	0	intron_retention	FALSE	canonical	3	6	junction_11	204.400989982638	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5705	False	NA	-1	True	TATAAA	-34	NA	25946362	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942526_25942616_25942741_25942976_25943145_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.23	chr17	-	3190	21	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_20	102.81410409083	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5683	False	NA	-1	True	TATAAA	-34	NA	25946384	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.24	chr17	-	3451	20	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_8	183.258623239644	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5702	False	NA	-1	True	TATAAA	-34	NA	25946365	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941821_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.25	chr17	-	3646	19	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_11	198.762351118672	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5719	False	NA	-1	True	TATAAA	-34	NA	25946348	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942526_25942616_25942741_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.26	chr17	-	4856	16	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-17	0	intron_retention	FALSE	canonical	3	468	junction_15	84.8639695826994	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5705	False	NA	-1	True	TATAAA	-34	NA	25946362	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25946098_25946220
ES.14600.27	chr17	-	3028	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_8	229.974406184688	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGTGCACTTGGCCT	5734	False	NA	-1	True	TATAAA	-34	NA	25946333	25938003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941125_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946098_25946220
ES.14600.28	chr17	-	3089	22	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	173.500377383973	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5673	False	NA	-2	True	TATAAA	-33	NA	25946394	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943689_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.29	chr17	-	3279	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	337	junction_19	103.932777123797	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5684	False	NA	-2	True	TATAAA	-33	NA	25946383	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.3	chr17	-	3667	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	4	180	intron_retention	FALSE	canonical	3	337	junction_20	103.014076707992	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTACCTCCTTCTTCA	5678	False	NA	NA	False	NA	NA	NA	25946389	25937719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.30	chr17	-	2477	9	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-3121	-1	intron_retention	FALSE	canonical	3	681	junction_4	47.7740449930713	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	9071	False	NA	-2	True	TATAAA	-33	NA	25942996	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939948_25940032_25940258_25941064_25941213_25941619_25942741_25942976
ES.14600.31	chr17	-	4037	19	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	468	junction_18	81.4308196880133	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5705	False	NA	-2	True	TATAAA	-33	NA	25946362	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.32	chr17	-	4144	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	337	junction_19	105.668980869532	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5673	False	NA	-2	True	TATAAA	-33	NA	25946394	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.33	chr17	-	3444	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	337	junction_19	105.539138215597	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5683	False	NA	-2	True	TATAAA	-33	NA	25946384	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.34	chr17	-	3056	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	183.131651589939	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5706	False	NA	-2	True	TATAAA	-33	NA	25946361	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939927_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.35	chr17	-	4103	18	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	337	junction_17	109.023060320562	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5705	False	NA	-2	True	TATAAA	-33	NA	25946362	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942288_25942376_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.36	chr17	-	3184	21	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	468	junction_20	76.3383750154534	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGCACTTGGCC	5683	False	NA	-2	True	TATAAA	-33	NA	25946384	25938004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.38	chr17	-	3835	19	FSM	ENSMUSG00000019214.15	ENSMUST00000168914.2	3812	19	-25	2	19	-2	multi-exon	FALSE	canonical	3	337	junction_18	106.239247821969	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGATGGTGCACTTGGC	5702	False	NA	-3	True	TATAAA	-32	NA	25946365	25938005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.39	chr17	-	3421	19	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_12	239.001859592951	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGATGGTGCACTTGGC	5673	False	NA	-3	True	TATAAA	-32	NA	25946394	25938005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25946220
ES.14600.4	chr17	-	3338	21	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	62	179	intron_retention	FALSE	canonical	3	468	junction_20	79.2377908576457	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTCTACCTCCTTCTTC	5799	False	NA	NA	False	NA	NA	NA	25946268	25937720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.40	chr17	-	3624	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	468	junction_19	79.0584832090334	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5679	False	NA	-4	True	TATAAA	-31	NA	25946388	25938006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.42	chr17	-	3825	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	655	junction_11	49.2991883533509	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5672	False	NA	-4	True	TATAAA	-31	NA	25946395	25938006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914
ES.14600.44	chr17	-	4368	17	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-18	-3	intron_retention	FALSE	canonical	0	0	junction_14	198.635019807057	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5704	False	NA	-4	True	TATAAA	-31	NA	25946363	25938006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945655_25945823_25945914_25946098_25946220
ES.14600.45	chr17	-	4635	16	NIC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	337	junction_15	114.631467465672	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5673	False	NA	-4	True	TATAAA	-31	NA	25946394	25938006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.46	chr17	-	3504	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	337	junction_20	103.115699580617	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGATGGTGCACTTGG	5705	False	NA	-4	True	TATAAA	-31	NA	25946362	25938006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.47	chr17	-	3764	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	4	-5	intron_retention	FALSE	canonical	3	6	junction_13	178.105102397433	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATAGGATGGTGCACTT	5678	False	NA	-6	True	TATAAA	-29	NA	25946389	25938008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943145_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.48	chr17	-	3910	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	4	5	intron_retention	FALSE	canonical	3	337	junction_19	105.719615583455	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCTCATAGGATGGT	5687	False	NA	-12	True	TATAAA	-23	NA	25946380	25938014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.49	chr17	-	3193	21	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-2	3	intron_retention	FALSE	canonical	3	468	junction_20	77.3230075721321	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCAGGCTCATAGGATG	5672	False	NA	-14	True	TATAAA	-21	NA	25946395	25938016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.5	chr17	-	3398	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	-11	-179	-2	179	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTCTACCTCCTTCTTC	5672	False	NA	NA	False	NA	NA	NA	25946395	25937720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.50	chr17	-	3057	22	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_10	172.36558731838	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCAGGCTCATAGGATG	5705	False	NA	-14	True	TATAAA	-21	NA	25946362	25938016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941905_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.51	chr17	-	3935	18	NIC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	4	1	intron_retention	FALSE	canonical	3	337	junction_17	108.854876248356	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTCAGGCTCATAGGA	5678	False	NA	-16	True	TATAAA	-19	NA	25946389	25938018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.53	chr17	-	5684	14	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-18	0	intron_retention	FALSE	canonical	3	337	junction_13	121.430965119861	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5704	False	NA	-17	True	TATAAA	-18	NA	25946363	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942526_25942616_25944609_25944715_25944769_25944853_25944947_25945348_25946095_25946220
ES.14600.54	chr17	-	3139	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_19	228.726140832219	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5683	False	NA	-17	True	TATAAA	-18	NA	25946384	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945832_25945914_25946098_25946220
ES.14600.56	chr17	-	4668	17	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-18	0	intron_retention	FALSE	canonical	3	468	junction_16	84.2807807272809	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5704	False	NA	-17	True	TATAAA	-18	NA	25946363	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.57	chr17	-	4062	18	NNC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-4	0	intron_retention	FALSE	canonical	2	20	junction_16	244.588023087931	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5679	False	NA	-17	True	TATAAA	-18	NA	25946388	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946098_25946220
ES.14600.58	chr17	-	4048	17	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	468	junction_16	84.775438660027	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5679	False	NA	-17	True	TATAAA	-18	NA	25946388	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939948_25940032_25940258_25941064_25941213_25941619_25942288_25942376_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.60	chr17	-	4209	17	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	337	junction_16	111.671882651812	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5673	False	NA	-17	True	TATAAA	-18	NA	25946394	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.61	chr17	-	3792	19	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-4	0	intron_retention	FALSE	canonical	2	20	junction_17	191.845946748819	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5679	False	NA	-17	True	TATAAA	-18	NA	25946388	25938019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946095_25946220
ES.14600.63	chr17	-	3148	21	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_18	189.219839076139	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5678	False	NA	-18	True	TATAAA	-17	NA	25946389	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945516_25945674_25945823_25945914_25946095_25946220
ES.14600.64	chr17	-	2956	21	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	189.648958605103	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5685	False	NA	-18	True	TATAAA	-17	NA	25946382	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942593_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.65	chr17	-	3131	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	0	intron_retention	FALSE	canonical	1	30	junction_7	172.397679798772	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5684	False	NA	-18	True	TATAAA	-17	NA	25946383	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940214_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.66	chr17	-	3048	22	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	174.714772416875	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942487_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.67	chr17	-	4613	18	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	468	junction_17	81.5372630121687	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5684	False	NA	-18	True	TATAAA	-17	NA	25946383	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.68	chr17	-	3733	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	468	junction_19	80.2070036524433	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5694	False	NA	-18	True	TATAAA	-17	NA	25946373	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.69	chr17	-	5142	17	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-16	0	intron_retention	FALSE	canonical	3	468	junction_16	86.1407822985141	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5706	False	NA	-18	True	TATAAA	-17	NA	25946361	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.70	chr17	-	3843	20	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	276.548283141637	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5738	False	NA	-18	True	TATAAA	-17	NA	25946329	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941210_25941619_25941751_25941821_25941917_25942193_25942526_25942616_25942741_25942976_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946098_25946220
ES.14600.71	chr17	-	3207	21	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_13	178.153101292119	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5722	False	NA	-18	True	TATAAA	-17	NA	25946345	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942526_25942616_25942741_25942976_25943145_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.72	chr17	-	3071	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	183.046789057134	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5690	False	NA	-18	True	TATAAA	-17	NA	25946377	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944603_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.73	chr17	-	3062	22	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	169.506138725887	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.74	chr17	-	4016	20	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6	junction_13	182.27237540715	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5672	False	NA	-18	True	TATAAA	-17	NA	25946395	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942741_25942976_25943145_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.75	chr17	-	4041	19	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	468	junction_18	81.9079014563775	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5663	False	NA	-18	True	TATAAA	-17	NA	25946404	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.76	chr17	-	4243	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-10	0	intron_retention	FALSE	canonical	3	468	junction_19	81.3830925698495	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5712	False	NA	-18	True	TATAAA	-17	NA	25946355	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.77	chr17	-	3613	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	52	0	intron_retention	FALSE	canonical	3	29	junction_12	178.12568316436	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5789	False	NA	-18	True	TATAAA	-17	NA	25946278	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.78	chr17	-	4946	18	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	468	junction_17	83.7166914603399	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5684	False	NA	-18	True	TATAAA	-17	NA	25946383	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25943075_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.80	chr17	-	3924	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-9	0	intron_retention	FALSE	canonical	3	468	junction_19	80.113976979546	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5713	False	NA	-18	True	TATAAA	-17	NA	25946354	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.81	chr17	-	5027	14	NIC	ENSMUSG00000019214.15	novel	3812	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_13	119.842500191172	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945823_25945914_25946095_25946220
ES.14600.82	chr17	-	3800	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	337	junction_19	105.595554132888	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5672	False	NA	-18	True	TATAAA	-17	NA	25946395	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942288_25942376_25942526_25942616_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.83	chr17	-	2823	21	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	189.065987157923	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5715	False	NA	-18	True	TATAAA	-17	NA	25946352	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939895_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.84	chr17	-	4635	17	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-9	0	intron_retention	FALSE	canonical	3	29	junction_10	201.658707659749	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5713	False	NA	-18	True	TATAAA	-17	NA	25946354	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.85	chr17	-	3030	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_20	227.82440427591	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5684	False	NA	-18	True	TATAAA	-17	NA	25946383	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943050_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945942_25946095_25946220
ES.14600.86	chr17	-	3081	22	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	174.970370021577	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939579_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.87	chr17	-	2249	12	NIC	ENSMUSG00000019214.15	novel	3421	21	NA	NA	-3160	0	intron_retention	FALSE	canonical	3	655	junction_10	52.9223663445252	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	9032	False	NA	-18	True	TATAAA	-17	NA	25943035	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25942526_25942616_25942741_25942976
ES.14600.88	chr17	-	3152	21	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	468	junction_20	79.2377908576457	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5685	False	NA	-18	True	TATAAA	-17	NA	25946382	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.89	chr17	-	3091	22	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	182.792883054122	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5685	False	NA	-18	True	TATAAA	-17	NA	25946382	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945832_25945914_25946095_25946220
ES.14600.9	chr17	-	4048	19	NNC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	-1	9	intron_retention	FALSE	non_canonical	0	0	junction_8	200.107417141549	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTCAGTGAGTGTCGG	5673	False	NA	NA	False	NA	NA	NA	25946394	25937890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25942174_25942372_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ES.14600.90	chr17	-	4347	19	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_5	187.706988629211	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5679	False	NA	-18	True	TATAAA	-17	NA	25946388	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940030_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.91	chr17	-	3548	20	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	30	junction_7	176.855231342433	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5673	False	NA	-18	True	TATAAA	-17	NA	25946394	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940214_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.94	chr17	-	4465	20	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	19	0	intron_retention	FALSE	canonical	3	468	junction_19	79.6756583048787	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5702	False	NA	-18	True	TATAAA	-17	NA	25946365	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14600.98	chr17	-	2773	12	NIC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	2727	0	intron_retention	FALSE	canonical	3	655	junction_9	52.5257905955346	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	8464	False	NA	-18	True	TATAAA	-17	NA	25943603	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502
ES.14600.99	chr17	-	5201	15	NNC	ENSMUSG00000019214.15	novel	3208	22	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_7	211.421669771525	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGTCAGGCTCATAG	5683	False	NA	-18	True	TATAAA	-17	NA	25946384	25938020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939948_25940032_25940258_25941064_25941751_25941817_25942169_25942265_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ES.14601.1	chr17	+	1965	5	NIC	ENSMUSG00000041199.4	novel	1745	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	41	junction_1	16.0682139642214	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946601	25950438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25946822_25947176_25947621_25947799_25947903_25948041_25948144_25949342
ES.14601.2	chr17	+	2385	3	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	76	junction_2	1.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	False	NA	16	True	AATAAA	-13	NA	25946707	25950430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25947903_25948041_25948144_25949342
ES.14601.3	chr17	+	1538	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	2	-9	2	-1	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGACCATGAGCATATC	NA	False	NA	23	True	AATAAA	-20	NA	25946707	25950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ES.14601.4	chr17	+	1720	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	17	8	2	-2	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	False	NA	16	True	AATAAA	-13	NA	25946707	25950430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ES.14601.5	chr17	+	3700	1	NIC	ENSMUSG00000041199.4	novel	1743	6	NA	NA	32	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGACCATGAGCATATC	NA	False	NA	23	True	AATAAA	-20	NA	25946737	25950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25946700_25950400
ES.14601.6	chr17	+	1659	4	ISM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	47	1377	32	-1367	intron_retention	FALSE	canonical	3	41	junction_1	16.0831174424198	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGTTGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	25946737	25949061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799
ES.14601.7	chr17	+	2166	4	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	42	-2	intron_retention	FALSE	canonical	3	76	junction_3	1.4142135623731	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	False	NA	16	True	AATAAA	-13	NA	25946747	25950430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25947621_25947799_25947903_25948041_25948144_25949342
ES.14601.8	chr17	+	1599	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	143	1	81	-1	multi-exon	FALSE	canonical	2	5	junction_1	28.5096474899287	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGACCATGAGCATATC	NA	False	NA	23	True	AATAAA	-20	NA	25946786	25950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ES.14601.9	chr17	+	1464	3	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	883	-2	intron_retention	FALSE	canonical	3	76	junction_2	1.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	False	NA	16	True	AATAAA	-13	NA	25947588	25950430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25947621_25947799_25948144_25949342
ES.14602.1	chr17	+	2220	12	NNC	ENSMUSG00000041062.8	novel	2626	16	NA	NA	5902	2	intron_retention	FALSE	non_canonical	0	0	junction_1	2.60958183534679	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCTCTGCTAGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	25960917	25967306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25961020_25961630_25961717_25961897_25962025_25962101_25962293_25962645_25962737_25962959_25963076_25963437_25963626_25963696_25963853_25963938_25964067_25965029_25965375_25965747_25965998_25966866
ES.14602.10	chr17	+	2002	11	NNC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	108.202772607729	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGATCCACTGTGTGTCT	6942	False	NA	5	True	AATAAA	-17	NA	25992771	26001764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25992862_25994019_25994116_25995922_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000220_26000353_26000661_26000820_26000989
ES.14602.11	chr17	+	2444	12	NNC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	79.7350986104189	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACTCAAATGACTGCCA	6952	False	NA	NA	False	AATAAA	-21	NA	25992781	26002308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989_26002039_26002119
ES.14602.12	chr17	+	1998	11	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	81.8291512848569	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGATCCACTGTGTGTCT	6952	False	NA	5	True	AATAAA	-17	NA	25992781	26001764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995922_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ES.14602.14	chr17	+	2439	9	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	241	junction_4	16.9022927438854	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGATCCACTGTGTGTCT	6952	False	NA	5	True	AATAAA	-17	NA	25992781	26001764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661
ES.14602.15	chr17	+	2604	9	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	1	20	intron_retention	FALSE	canonical	3	241	junction_4	19.5188210453398	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGCCTTTCAAAGTT	6952	False	NA	31	True	AATAAA	-43	NA	25992781	26001790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000820_26000989
ES.14602.16	chr17	+	2770	9	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	1	52	intron_retention	FALSE	canonical	3	241	junction_4	19.5572077505967	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCCCCAGGATATGTC	6952	False	NA	63	True	NA	NA	NA	25992781	26001822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_26000353_26000661_26000820_26000989
ES.14602.17	chr17	+	3399	8	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	2	-3	intron_retention	FALSE	canonical	3	241	junction_4	17.9272907909154	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGGATCCACTGTGTGT	6953	False	NA	3	True	AATAAA	-15	NA	25992782	26001762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_26000353_26000661_26000820_26000989
ES.14602.18	chr17	+	1956	11	NNC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.7129120763665	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAAGGATCCACTGTG	6954	False	NA	0	True	AATAAA	-12	NA	25992783	26001759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999298_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ES.14602.19	chr17	+	2419	10	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	237	junction_7	21.3703382758601	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGATCCACTGTGTGTC	6956	False	NA	4	True	AATAAA	-16	NA	25992785	26001763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999927_26000214_26000353_26000661_26000820_26000989
ES.14602.2	chr17	+	2215	15	NNC	ENSMUSG00000041062.8	novel	2626	16	NA	NA	5926	67797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.47023092368437	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCCATCTCCCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	25960941	26035101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25961020_25961630_25961717_25961897_25962025_25962101_25962293_25962645_25962737_25962933_25963076_25963437_25963626_25963696_25963853_25963938_25964067_25965029_25965161_25965279_25965375_25965747_25965998_25966866_25967310_25981555_25981638_26035074
ES.14602.21	chr17	+	1963	2	ISM	ENSMUSG00000002280.12	ENSMUST00000237541.2	1921	11	6607	-23	3592	20	intron_retention	FALSE	canonical	3	280	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGCCTTTCAAAGTT	NA	False	NA	31	True	AATAAA	-43	NA	25999384	26001790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25999411_25999853
ES.14602.22	chr17	+	4510	4	NIC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-96	0	intron_retention	TRUE	canonical	3	16	junction_3	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAAGTGGGTTATT	NA	False	NA	-3	True	ATTAAA	-9	NA	26027962	26040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26028361_26035390_26037557_26037869_26037934_26038347
ES.14602.23	chr17	+	3592	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	-93	-10	-93	10	multi-exon	FALSE	canonical	3	16	junction_5	4.22374241638857	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTATTATTTTTTGGT	NA	False	NA	7	True	ATTAAA	-19	NA	26027965	26040239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
ES.14602.24	chr17	+	1711	2	NNC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAAGTGGGTTATT	NA	False	NA	-3	True	ATTAAA	-9	NA	26027980	26040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26028093_26038630
ES.14602.25	chr17	+	3350	7	NNC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-55	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.3785861257989	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTATTATTTTTTGGT	NA	False	NA	7	True	ATTAAA	-19	NA	26028003	26040239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26028035_26028178_26028361_26035390_26036038_26036653_26037163_26037531_26037557_26037869_26037934_26038347
ES.14602.27	chr17	+	3827	5	NIC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	16	junction_4	4.65698400254929	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAAGTGGGTTATT	NA	False	NA	-3	True	ATTAAA	-9	NA	26028029	26040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26028361_26035390_26036038_26036653_26037557_26037869_26037934_26038347
ES.14602.28	chr17	+	1906	3	NNC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-12	102659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATCCTCAGCTAATG	NA	False	NA	NA	False	NA	NA	NA	26028046	26142888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26028368_26038669_26040228_26142861
ES.14602.29	chr17	+	3439	6	NIC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	10.0079968025574	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAAGTGGGTTATT	NA	False	NA	-3	True	ATTAAA	-9	NA	26028048	26040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26028361_26035390_26036038_26036653_26037163_26037531_26037557_26037869_26037934_26038347
ES.14602.3	chr17	+	1225	7	ISM	ENSMUSG00000041062.8	ENSMUST00000047098.7	2626	16	8585	-2	8585	2	3prime_fragment	FALSE	canonical	1	2	junction_3	2.42670329642684	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCTCTGCTAGAGCC	1848	False	NA	NA	False	AATAAA	-18	NA	25963600	25967306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_25963626_25963696_25963853_25963938_25964067_25965029_25965161_25965279_25965375_25965747_25965998_25966866
ES.14602.30	chr17	+	3481	7	NNC	ENSMUSG00000025738.9	novel	3489	6	NA	NA	33	102659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.19540948275581	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATCCTCAGCTAATG	NA	False	NA	NA	False	NA	NA	NA	26028091	26142888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347_26040228_26142861
ES.14602.31	chr17	+	4111	2	FSM	ENSMUSG00000025737.6	ENSMUST00000160275.2	716	2	-1014	-2381	-1	4	multi-exon	FALSE	canonical	3	131	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCACTTGTCACTTT	NA	False	NA	13	True	AATAAA	-15	NA	26042621	26047699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26043661_26044627
ES.14602.32	chr17	+	3078	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	21	0	-1	0	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	False	NA	18	True	AATAAA	-20	NA	26042621	26047704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
ES.14602.33	chr17	+	3263	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	100	junction_2	13.3499895963339	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042621	26047698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
ES.14602.34	chr17	+	3540	4	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	100	junction_2	15.1070255914995	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042621	26047698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26043661_26044627_26045599_26046008_26046968_26047127
ES.14602.35	chr17	+	3142	8	FSM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	0	-3	0	3	multi-exon	FALSE	canonical	3	89	junction_2	15.8449116277055	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042622	26047698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
ES.14602.36	chr17	+	3258	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	89	junction_2	16.2343942158479	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTGGCCACTTGTC	NA	False	NA	8	True	AATAAA	-10	NA	26042622	26047694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046968_26047127_26047313_26047388
ES.14602.37	chr17	+	3381	6	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	100	junction_2	12.2409149984795	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042623	26047698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046968_26047127_26047313_26047388
ES.14602.38	chr17	+	4839	3	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	5	-2	intron_retention	FALSE	canonical	3	114	junction_2	9.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCACTTGTCACTTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	26042627	26047702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26046968_26047127_26047313_26047388
ES.14602.4	chr17	+	657	3	Intergenic	novelGene_12226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACATGTGTCCCATCTGT	NA	False	NA	NA	False	AATAAA	-44	NA	25975582	25977647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25975749_25976240_25976421_25977336
ES.14602.40	chr17	+	4292	5	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	11	1	intron_retention	FALSE	canonical	3	100	junction_1	14.5322916293336	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGGCCACTTGTCAC	NA	False	NA	10	True	AATAAA	-12	NA	26042633	26047696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127
ES.14602.41	chr17	+	4218	6	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	11	3	intron_retention	FALSE	canonical	3	100	junction_1	13.001538370516	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCACTTGTCACTT	NA	False	NA	12	True	AATAAA	-14	NA	26042633	26047698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
ES.14602.42	chr17	+	3297	7	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	13	2	intron_retention	FALSE	canonical	3	91	junction_4	15.7020876177518	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGGCCACTTGTCACT	NA	False	NA	11	True	AATAAA	-13	NA	26042635	26047697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046331_26046401_26046968_26047127_26047313_26047388
ES.14602.43	chr17	+	3969	3	ISM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	21	-4	21	4	intron_retention	FALSE	canonical	3	89	junction_2	21	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCACTTGTCACTTT	NA	False	NA	13	True	AATAAA	-15	NA	26042643	26047699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26043661_26044627_26044806_26044925
ES.14602.44	chr17	+	4740	4	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	34	-1	intron_retention	FALSE	canonical	3	91	junction_1	17.1723291631883	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTTGTCACTTTCATT	NA	False	NA	17	True	AATAAA	-19	NA	26042656	26047703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26046331_26046401_26046968_26047127_26047313_26047388
ES.14602.45	chr17	+	2912	6	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	301	0	intron_retention	FALSE	canonical	3	89	junction_1	16.0424437041244	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGGCCACTTGTCA	NA	False	NA	9	True	AATAAA	-11	NA	26043936	26047695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26044806_26044925_26045599_26046008_26046128_26046208_26046968_26047127_26047313_26047388
ES.14602.46	chr17	+	2100	8	NIC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	70	junction_1	7.88954358370519	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTCTGCTGGGGGA	NA	False	NA	15	True	AATAAA	-17	NA	26048019	26050740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.47	chr17	+	2060	8	NNC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	3	-10	intron_retention	FALSE	canonical	0	0	junction_1	31.3225484406414	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCTCACTCTCCTGG	NA	False	NA	7	True	NA	NA	NA	26048019	26050806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26048038_26048213_26048313_26048457_26048507_26048579_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.48	chr17	+	2081	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	5	5	-4	-5	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTCTCCTGGTGGAT	NA	False	NA	12	True	NA	NA	NA	26048021	26050811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.49	chr17	+	2320	6	NIC	ENSMUSG00000025736.16	novel	1951	9	NA	NA	0	-8	intron_retention	FALSE	canonical	3	78	junction_3	5.95315042645489	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCTCACTCTCCTGGTG	NA	False	NA	9	True	NA	NA	NA	26048025	26050808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26048313_26048457_26048507_26048579_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.5	chr17	+	236	1	Intergenic	novelGene_12227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAATAACCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	25982443	25982679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_25982400_25982700
ES.14602.50	chr17	+	2782	1	NIC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	2	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCACTCTCCTGGTGG	NA	False	NA	10	True	NA	NA	NA	26048027	26050809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26048000_26050800
ES.14602.51	chr17	+	1909	9	NNC	ENSMUSG00000025736.16	novel	1951	9	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	36.6290526768029	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTCTGCTGGGGGA	NA	False	NA	15	True	AATAAA	-17	NA	26048028	26050740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26048100_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048971_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.52	chr17	+	2144	8	ISM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	16	6	-5	-6	intron_retention	FALSE	canonical	3	70	junction_1	9.46960766810089	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCACTCTCCTGGTGGA	NA	False	NA	11	True	NA	NA	NA	26048032	26050810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273
ES.14602.53	chr17	+	2137	8	NIC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	2	-7	intron_retention	FALSE	canonical	3	78	junction_5	7.57277616039918	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCACTCTCCTGGTGG	NA	False	NA	10	True	NA	NA	NA	26048039	26050809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.54	chr17	+	1954	9	NNC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	29.8611369508932	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTCTGCTGGGGGA	NA	False	NA	15	True	AATAAA	-17	NA	26048039	26050740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26048100_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.55	chr17	+	2004	9	FSM	ENSMUSG00000025736.16	ENSMUST00000152434.9	1951	9	17	-70	5	-5	multi-exon	FALSE	canonical	1	4	junction_5	27.2855272992845	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTCTCCTGGTGGAT	NA	False	NA	12	True	NA	NA	NA	26048042	26050811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048971_26049036_26049112_26049181_26049273_26049409_26049483
ES.14602.56	chr17	+	1131	1	Antisense	novelGene_ENSMUSG00000039615.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAAGTCCACAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	26052108	26053239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_26052100_26053200
ES.14602.57	chr17	+	177	1	Intergenic	novelGene_12230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTCTCCTCT	1859	False	NA	NA	False	NA	NA	NA	26089138	26089315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26089100_26089300
ES.14602.58	chr17	+	1051	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-31	6	6	3	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGCTGGGAATACC	7164	False	NA	33	True	AATAAA	-34	NA	26094443	26096137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ES.14602.59	chr17	+	1120	5	NNC	ENSMUSG00000025731.17	novel	1026	5	NA	NA	7	2	intron_retention	FALSE	canonical	2	5	junction_1	190.239815758952	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	7165	False	NA	32	True	AATAAA	-33	NA	26094444	26096136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26094701_26094862_26095097_26095193_26095254_26095468_26095537_26095634
ES.14602.6	chr17	+	2384	10	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-25	52	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCCCCAGGATATGTC	6895	False	NA	63	True	NA	NA	NA	25992724	26001822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
ES.14602.60	chr17	+	855	4	FSM	ENSMUSG00000025731.17	ENSMUST00000110456.3	891	4	35	1	-1	-1	multi-exon	FALSE	canonical	3	16	junction_1	203.922098415601	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGCTTGCTGGGAA	7193	False	NA	29	True	AATAAA	-30	NA	26094472	26096133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26094701_26095193_26095254_26095468_26095537_26095634
ES.14602.61	chr17	+	1115	4	ISM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	-1	10	0	-1	intron_retention	FALSE	canonical	3	348	junction_1	55.659680200303	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGCTTGCTGGGAA	7194	False	NA	29	True	AATAAA	-30	NA	26094473	26096133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468
ES.14602.62	chr17	+	810	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	426	7	0	2	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	7194	False	NA	32	True	AATAAA	-33	NA	26094473	26096136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ES.14602.63	chr17	+	1647	1	NIC	ENSMUSG00000025731.17	novel	1243	6	NA	NA	12	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGCTTGCTGGGAA	7207	False	NA	29	True	AATAAA	-30	NA	26094486	26096133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26094500_26096100
ES.14602.64	chr17	+	1381	1	Intergenic	novelGene_12231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAACAA	1243	False	NA	NA	False	NA	NA	NA	26112651	26114032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26112700_26114000
ES.14602.65	chr17	+	198	1	FSM	ENSMUSG00000057580.5	ENSMUST00000170379.2	372	1	114	60	108	-60	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTATCACAAAAA	4146	False	NA	NA	False	AATAAA	-11	NA	26120943	26121141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26120900_26121100
ES.14602.7	chr17	+	2551	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	-4	8	-4	-8	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCTCCTAACTACTCAA	6916	False	NA	NA	False	AATAAA	-11	NA	25992745	26002298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ES.14602.8	chr17	+	2022	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	19	514	-9	22	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCCTTTCAAAGTTTT	6939	False	NA	33	True	AATAAA	-45	NA	25992768	26001792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ES.14602.9	chr17	+	2005	11	NNC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	-8	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.3728972748339	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTCAAAGTTTTATTC	6940	False	NA	37	True	NA	NA	NA	25992769	26001796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000333_26000661_26000820_26000989
ES.14603.1	chr17	+	179	1	Intergenic	novelGene_12232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCACCAT	NA	False	NA	NA	False	NA	NA	NA	26158298	26158477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26158300_26158500
ES.14604.1	chr17	-	3007	10	NIC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	0	-1	intron_retention	FALSE	canonical	2	2	junction_8	20.3032564437881	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6591	False	NA	-3	True	AATAAA	-21	NA	25973352	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25970960_25971262_25971349_25971915_25972049_25972747_25972792_25973105
ES.14604.10	chr17	-	2102	15	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	15	-1	intron_retention	FALSE	canonical	2	3	junction_13	16.9008211369164	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6607	False	NA	-3	True	AATAAA	-21	NA	25973336	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972747_25972792_25973105
ES.14604.11	chr17	-	1959	15	NNC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	22.4027376242553	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6911	False	NA	-3	True	AATAAA	-21	NA	25973032	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25971997_25972747_25972792_25972904
ES.14604.12	chr17	-	2382	10	NIC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	832	-1	intron_retention	FALSE	canonical	3	43	junction_9	8.68516544260569	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	7774	False	NA	-3	True	AATAAA	-21	NA	25972169	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970960_25971262_25971349_25971915
ES.14604.13	chr17	-	3126	11	NNC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	23	-1	intron_retention	FALSE	canonical	0	0	junction_10	20.2573443471744	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6615	False	NA	-3	True	AATAAA	-21	NA	25973328	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970960_25971262_25971349_25971915_25972399_25972747_25972814_25973105
ES.14604.14	chr17	-	2077	17	FSM	ENSMUSG00000063011.8	ENSMUST00000236137.2	2054	17	-21	-2	-20	-1	multi-exon	FALSE	canonical	1	2	junction_13	16.7330838087305	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6571	False	NA	-3	True	AATAAA	-21	NA	25973372	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ES.14604.15	chr17	-	2041	16	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	17.5494222760244	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6916	False	NA	-3	True	AATAAA	-21	NA	25973027	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25972904
ES.14604.16	chr17	-	1872	14	NIC	ENSMUSG00000063011.8	novel	2114	16	NA	NA	1036	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	22.707296223354	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	7978	False	NA	-3	True	AATAAA	-21	NA	25971965	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968147_25968264_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915
ES.14604.17	chr17	-	3439	10	NNC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	2	junction_7	20.4202755691736	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAGATGTCCTGTAGTG	6590	False	NA	-8	True	AATAAA	-16	NA	25973353	25967592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25968518_25968799_25969148_25969232_25969828_25970052_25970153_25970226_25970960_25971262_25971349_25971915_25972396_25972747_25972792_25973105_25973197_25973316
ES.14604.18	chr17	-	3033	12	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	-215	-5	intron_retention	FALSE	canonical	3	35	junction_11	11.2360105858039	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGAGATGTCCTGTAG	6376	False	NA	-10	True	AATAAA	-14	NA	25973567	25967594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25968062_25968422_25968518_25968799_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
ES.14604.19	chr17	-	3800	7	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	9	-6	intron_retention	FALSE	canonical	3	35	junction_6	13.3416640641263	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTTGAGATGTCCTGTA	6601	False	NA	-11	True	AATAAA	-13	NA	25973342	25967595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25968062_25968422_25968518_25968799_25970960_25971262_25971349_25971915_25972792_25973105_25973197_25973316
ES.14604.2	chr17	-	2167	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	-122	-1	-122	-1	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6469	False	NA	-3	True	AATAAA	-21	NA	25973474	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ES.14604.3	chr17	-	2219	17	NNC	ENSMUSG00000063011.8	novel	2044	17	NA	NA	-824	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.1896589553138	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	5767	False	NA	-3	True	AATAAA	-21	NA	25974176	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973966
ES.14604.5	chr17	-	2940	13	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	35	junction_12	10.9835735937303	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6589	False	NA	-3	True	AATAAA	-21	NA	25973354	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
ES.14604.7	chr17	-	2932	15	NIC	ENSMUSG00000063011.8	novel	2054	17	NA	NA	-138	-1	intron_retention	FALSE	canonical	0	0	junction_2	21.8809394269095	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6453	False	NA	-3	True	AATAAA	-21	NA	25973490	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968147_25968264_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
ES.14604.8	chr17	-	2437	12	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	-26	-1	intron_retention	FALSE	canonical	2	3	junction_11	18.9200143273931	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6916	False	NA	-3	True	AATAAA	-21	NA	25973027	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972747
ES.14604.9	chr17	-	2451	15	NIC	ENSMUSG00000063011.8	novel	2165	16	NA	NA	28	-1	intron_retention	FALSE	canonical	3	43	junction_12	8.96592187686469	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	6620	False	NA	-3	True	AATAAA	-21	NA	25973323	25967587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105
ES.14605.10	chr17	-	1300	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	87	18	-4	-5	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGGATCCTTCCAGA	4340	False	NA	-19	True	AATAAA	-30	NA	26004560	26001780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ES.14605.11	chr17	-	1102	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	-14	-14	1	-7	multi-exon	FALSE	canonical	3	7	junction_7	17.2496672549984	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGTGGATCCTTCCA	4345	False	NA	-21	True	AATAAA	-28	NA	26004555	26001782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
ES.14605.12	chr17	-	1608	6	NNC	ENSMUSG00000061046.10	novel	1453	8	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_1	24.204131878669	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACACAGTGGATCCTTCC	4361	False	NA	-22	True	AATAAA	-27	NA	26004539	26001783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26002858_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
ES.14605.13	chr17	-	2002	5	FSM	ENSMUSG00000061046.10	ENSMUST00000129917.8	1790	5	-245	33	2	0	multi-exon	FALSE	canonical	3	51	junction_2	4.7169905660283	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGGTACCAGACACAC	4346	False	NA	-35	True	AATAAA	-14	NA	26004554	26001796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26002557_26002758_26002861_26003048_26003547_26003634_26003700_26003977
ES.14605.14	chr17	-	1400	7	NIC	ENSMUSG00000061046.10	novel	1128	8	NA	NA	2	0	intron_retention	FALSE	canonical	2	5	junction_6	18.9685412078935	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGGTACCAGACACAC	4362	False	NA	-35	True	AATAAA	-14	NA	26004538	26001796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004396
ES.14605.2	chr17	-	2238	4	ISM	ENSMUSG00000061046.10	ENSMUST00000143248.8	951	5	-13	-1041	3	1	intron_retention	FALSE	canonical	3	51	junction_1	5.43650214343336	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCAGGTCTGTTTATTA	4347	False	NA	0	True	NA	NA	NA	26004553	26001761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26002861_26003048_26003547_26003634_26003700_26003977
ES.14605.3	chr17	-	1643	8	ISM	ENSMUSG00000061046.10	ENSMUST00000140738.8	1194	9	-46	2945	-4	1	5prime_fragment	FALSE	canonical	3	40	junction_3	8.60232526704263	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCAGGTCTGTTTATTA	4340	False	NA	0	True	NA	NA	NA	26004560	26001761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ES.14605.4	chr17	-	1466	7	NIC	ENSMUSG00000061046.10	novel	1405	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	42	junction_6	7.16472842006823	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCAGGTCTGTTTATTA	4360	False	NA	0	True	NA	NA	NA	26004540	26001761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003547_26003634_26003700_26003977_26004169_26004401
ES.14605.5	chr17	-	2414	4	NIC	ENSMUSG00000061046.10	novel	1074	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	48	junction_2	6.48074069840786	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGTGCAGGTCTGTTT	4359	False	NA	-4	True	AATAAA	-45	NA	26004541	26001765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002861_26003048_26003343_26003428_26003547_26003634
ES.14605.7	chr17	-	1325	6	NIC	ENSMUSG00000061046.10	novel	1128	8	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_3	27.1779322245089	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATCCTTCCAGAGGTG	4348	False	NA	-15	True	AATAAA	-34	NA	26004552	26001776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002557_26002758_26002861_26003048_26003153_26003428_26003547_26003634_26003700_26004396
ES.14605.8	chr17	-	1985	5	NIC	ENSMUSG00000061046.10	novel	1267	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	51	junction_3	4.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATCCTTCCAGAGGTG	4337	False	NA	-15	True	AATAAA	-34	NA	26004563	26001776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003547_26003634
ES.14605.9	chr17	-	1806	7	NIC	ENSMUSG00000061046.10	novel	1453	8	NA	NA	0	-5	intron_retention	FALSE	canonical	3	40	junction_2	8.90692614392492	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGGATCCTTCCAGA	4360	False	NA	-19	True	AATAAA	-30	NA	26004540	26001780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ES.14606.1	chr17	-	2272	1	Genic_Genomic	ENSMUSG00000057411.10_ENSMUSG00000118135.2	novel	NA	NA	NA	NA	22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGATTCTTTTCTTTCCA	8414	False	NA	NA	False	GATAAA	-14	NA	26011325	26009053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_26009100_26011300
ES.14606.10	chr17	-	4819	6	Fusion	ENSMUSG00000057411.10_ENSMUSG00000002274.14	novel	1321	5	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	3	junction_4	100.593041508844	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	5885	False	NA	-9	True	AATAAA	-15	NA	26016065	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26009753_26009906_26009958_26010319_26014266_26014347_26014408_26015059_26015324_26015838
ES.14606.11	chr17	-	6221	2	FSM	ENSMUSG00000057411.10_ENSMUSG00000002274.14	ENSMUST00000237703.2	1528	2	-4695	2	-7	-2	multi-exon	FALSE	canonical	3	227	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	5886	False	NA	-9	True	AATAAA	-15	NA	26016064	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26009958_26010319
ES.14606.12	chr17	-	641	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	-16	2	-8	-2	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	8362	False	NA	-9	True	AATAAA	-15	NA	26011377	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
ES.14606.13	chr17	-	4992	6	Fusion	ENSMUSG00000057411.10_ENSMUSG00000002274.14	novel	987	5	NA	NA	9	-2	intron_retention	FALSE	canonical	3	84	junction_4	68.0311693270077	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	5849	False	NA	-9	True	AATAAA	-15	NA	26016101	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26009753_26009906_26009958_26010319_26014266_26014347_26014408_26015214_26015616_26015838
ES.14606.14	chr17	-	1712	2	ISM	ENSMUSG00000057411.10	ENSMUST00000235327.2	1267	4	0	2	0	-2	intron_retention	FALSE	canonical	3	234	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	8392	False	NA	-9	True	AATAAA	-15	NA	26011347	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26009753_26009906
ES.14606.15	chr17	-	2127	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-8	632	-8	-632	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGGACAGAGAGCATGC	5885	False	NA	NA	False	NA	NA	NA	26016065	26012826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
ES.14606.16	chr17	-	1347	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-2	1406	-2	198	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTTGTTTTTTT	5891	False	NA	-5	True	NA	NA	NA	26016059	26013600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
ES.14606.17	chr17	-	1182	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	-36	1605	17	-1	multi-exon	FALSE	canonical	3	84	junction_2	5.71547606649408	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTAGTCATGGTCT	5857	False	NA	-3	True	NA	NA	NA	26016093	26013799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
ES.14606.18	chr17	-	1325	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235294.2	1198	4	-55	-72	26	-4	multi-exon	FALSE	canonical	1	3	junction_2	43.8482230730809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5866	False	NA	-6	True	NA	NA	NA	26016084	26013802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26014266_26014347_26014408_26015059_26015616_26015838
ES.14606.19	chr17	-	862	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235925.2	698	4	-126	-38	-11	-4	multi-exon	FALSE	canonical	2	10	junction_3	38.3173879879908	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5882	False	NA	-6	True	NA	NA	NA	26016068	26013802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26014266_26014347_26014408_26015214_26015324_26015838
ES.14606.2	chr17	-	644	5	NNC	ENSMUSG00000057411.10	novel	1321	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	90.9763018593304	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTGTTCCAGGAA	9979	False	NA	-2	True	AATAAA	-22	NA	26011770	26009474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011701
ES.14606.20	chr17	-	1208	3	NIC	ENSMUSG00000002274.14	novel	2751	4	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	84	junction_1	5.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCACTGTAGTCATGG	5910	False	NA	-6	True	NA	NA	NA	26016040	26013802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26014408_26015214_26015616_26015838
ES.14606.3	chr17	-	1091	1	NIC	ENSMUSG00000057411.10	novel	700	4	NA	NA	486	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTGTTCCAGGAA	9174	False	NA	-2	True	AATAAA	-22	NA	26010565	26009474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26009500_26010600
ES.14606.4	chr17	-	918	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	403	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTGTTCCAGGAA	8370	False	NA	-2	True	AATAAA	-22	NA	26011369	26009474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ES.14606.7	chr17	-	4809	8	Fusion	ENSMUSG00000057411.10_ENSMUSG00000002274.14	novel	627	5	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_4	90.3686328098327	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	5885	False	NA	-7	True	AATAAA	-17	NA	26016065	26009479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26010869_26014266_26014347_26014408_26015059_26015616_26015838
ES.14606.8	chr17	-	4931	5	Fusion	ENSMUSG00000057411.10_ENSMUSG00000002274.14	novel	987	5	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_1	40.1434926233381	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTGTTTGTTC	5860	False	NA	-8	True	AATAAA	-16	NA	26016090	26009480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26009753_26010319_26014266_26014347_26014408_26015214_26015616_26015838
ES.14606.9	chr17	-	1235	3	NIC	ENSMUSG00000057411.10	novel	1267	4	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	89.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	8371	False	NA	-9	True	AATAAA	-15	NA	26011368	26009481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26009753_26010319_26010461_26010545
ES.14607.1	chr17	-	198	1	Intergenic	novelGene_12228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACTTGGAACCGAGTTC	NA	False	NA	NA	False	NA	NA	NA	26024854	26024656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26024700_26024900
ES.14608.1	chr17	-	1442	1	Intergenic	novelGene_12229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCAGTATAGCAAG	NA	False	NA	NA	False	NA	NA	NA	26034530	26033088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26033100_26034500
ES.14609.1	chr17	-	1320	1	Antisense	novelGene_ENSMUSG00000025737.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGGTCTTGGAGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	26043629	26042309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_26042300_26043600
ES.1461.1	chr1	-	7754	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-377	-1048	15	11	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCGGTGTTGTTAAGTT	6779	False	NA	NA	False	NA	NA	NA	136273813	136195849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.10	chr1	-	7733	18	NNC	ENSMUSG00000041570.15	novel	4916	18	NA	NA	10	-43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	17.0399489902903	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTGACGCTGATTCTTC	6774	False	NA	-7	True	AATAAA	-10	NA	136273818	136196032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136261337_136261495_136273036
ES.1461.11	chr1	-	5251	7	ISM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	63201	-405	-747	405	3prime_fragment	FALSE	canonical	3	44	junction_3	5.93717104351896	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCAGATTTTTTTTTAT	2586	False	NA	NA	False	AATACA	-15	NA	136210235	136196492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043
ES.1461.12	chr1	-	6988	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-416	-243	-10	243	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGACCTCGCCTGTCT	6740	False	NA	NA	False	AATAAA	-36	NA	136273852	136196654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.13	chr1	-	6733	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-404	0	2	0	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAGACACCAATTTTT	6752	False	NA	0	True	ATTAAA	-22	NA	136273840	136196897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.14	chr1	-	6706	17	NNC	ENSMUSG00000041570.15	novel	6329	17	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.0455453347316	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAGACACCAATTTTT	6772	False	NA	0	True	ATTAAA	-22	NA	136273820	136196897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202605_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.16	chr1	-	7909	8	ISM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	59816	10	-4132	-10	intron_retention	FALSE	canonical	3	34	junction_7	9.31752791949733	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTTACCTTTCAGAC	6768	False	NA	-10	True	ATTAAA	-12	NA	136213620	136196907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549
ES.1461.17	chr1	-	5185	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-402	1546	4	-100	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATGTAATCACAGTGT	6754	False	NA	NA	False	ATTAAA	-31	NA	136273838	136198443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.2	chr1	-	7656	17	NIC	ENSMUSG00000041570.15	novel	6329	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	13.4762522609218	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGATAACGTTATT	6764	False	NA	-17	True	AATAAA	-18	NA	136273828	136195989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202639_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.3	chr1	-	7675	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	-438	-908	-32	0	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGATAACGTTATT	6718	False	NA	-17	True	AATAAA	-18	NA	136273874	136195989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.1461.4	chr1	-	7532	16	NIC	ENSMUSG00000041570.15	novel	6329	17	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	14.736198816369	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTGATAACGTTAT	6776	False	NA	-18	True	AATAAA	-17	NA	136273816	136195990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136232032_136232195_136252474_136252735_136273036
ES.1461.8	chr1	-	7463	18	NNC	ENSMUSG00000041570.15	novel	4916	18	NA	NA	4	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	14.1887913265351	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACGCTGATTCTTCAAT	6754	False	NA	-4	True	AATAAA	-13	NA	136273838	136196029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036_136273267_136273402
ES.1461.9	chr1	-	6975	18	NNC	ENSMUSG00000041570.15	novel	4916	18	NA	NA	313	-40	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	17.1159287595222	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACGCTGATTCTTCAAT	7469	False	NA	-4	True	AATAAA	-13	NA	136273123	136196029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136212746_136212838_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ES.14610.1	chr17	-	2422	1	FSM	ENSMUSG00000093076.3	ENSMUST00000175335.3	64	1	-1481	-877	-1481	877	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTCATGGCTTTTTG	6797	False	NA	NA	False	AATACA	-27	NA	26051883	26049461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049500_26051900
ES.14610.10	chr17	-	1218	6	NNC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	626.760113600092	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6753	False	NA	-18	True	AATAAA	-16	NA	26051927	26049608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050197_26050511_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.100	chr17	-	7189	36	NNC	ENSMUSG00000073434.13	novel	5991	41	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	19.5637315417263	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATACATTGTTTTATTGT	9834	False	NA	NA	False	AATAAA	-18	NA	26080449	26063749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068969_26069008_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078900_26078992_26079108_26079345_26079792_26079880_26080058_26080158
ES.14610.101	chr17	-	4295	15	NNC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	-964	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	26.255903126337	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATACATTGTTTTATTGT	9811	False	NA	NA	False	AATAAA	-18	NA	26071805	26063749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068536_26068969_26069008_26069490_26069720_26069913_26070369_26070502_26070691
ES.14610.102	chr17	-	5870	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	19.2649941603936	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATACATTGTTTTATTGT	9830	False	NA	NA	False	AATAAA	-18	NA	26080453	26063749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076344_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.103	chr17	-	8023	36	NNC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	22.2957852702327	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATACATTGTTTTATTG	9835	False	NA	NA	False	AATAAA	-17	NA	26080448	26063750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066729_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068969_26069008_26069490_26069720_26069913_26070369_26070502_26070691_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072862_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079792_26079880
ES.14610.104	chr17	-	6992	18	NNC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	305	-3	intron_retention	FALSE	canonical	0	0	junction_3	20.2132232576516	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATACATTGTTTTATTG	8125	False	NA	NA	False	AATAAA	-17	NA	26073963	26063750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064967_26065104_26065213_26065389_26065497_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26072827_26073011_26073152_26073503
ES.14610.105	chr17	-	5578	40	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_34	20.6619578525637	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATACATTGTTTTATTG	9817	False	NA	NA	False	AATAAA	-17	NA	26080466	26063750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080424
ES.14610.107	chr17	-	5880	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	19.1317635099329	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATACATTGTTTTATTG	9816	False	NA	NA	False	AATAAA	-17	NA	26080467	26063750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080227
ES.14610.108	chr17	-	4234	24	NIC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	242	-3	intron_retention	FALSE	canonical	3	31	junction_21	14.2255660582853	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATACATTGTTTTATTG	8062	False	NA	NA	False	AATAAA	-17	NA	26074026	26063750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503
ES.14610.11	chr17	-	1514	5	NIC	ENSMUSG00000039615.10	novel	1408	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1486	junction_1	48.5714679621689	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6766	False	NA	-18	True	AATAAA	-16	NA	26051914	26049608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26051219_26051665
ES.14610.12	chr17	-	1888	5	ISM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	-32	-1	2	-1	intron_retention	FALSE	canonical	3	1486	junction_1	54.1219687372882	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6755	False	NA	-18	True	AATAAA	-16	NA	26051925	26049608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019
ES.14610.13	chr17	-	1489	5	NNC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	73	junction_3	638.200791287507	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6745	False	NA	-18	True	AATAAA	-16	NA	26051935	26049608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050606_26050769_26050884_26051019_26051219_26051665
ES.14610.16	chr17	-	1216	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	571.607212651796	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCATGTGCTGGTGCAG	6795	False	NA	-18	True	AATAAA	-16	NA	26051885	26049608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050929_26051019_26051219_26051665
ES.14610.17	chr17	-	1255	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	573.08398162922	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6777	False	NA	-19	True	AATAAA	-15	NA	26051903	26049609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050951_26051019_26051219_26051665
ES.14610.18	chr17	-	1395	6	NNC	ENSMUSG00000039615.10	novel	1408	6	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	73	junction_4	597.282043928997	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6747	False	NA	-20	True	AATAAA	-14	NA	26051933	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050884_26051019_26051219_26051665
ES.14610.19	chr17	-	1379	7	FSM	ENSMUSG00000039615.10	ENSMUST00000237186.2	1341	7	-59	21	-59	-1	multi-exon	FALSE	canonical	2	3	junction_6	575.587139845528	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6243	False	NA	-20	True	AATAAA	-14	NA	26052437	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26052059
ES.14610.2	chr17	-	1316	6	NNC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	626.760113600092	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATTTTG	6787	False	NA	NA	False	AATACA	-12	NA	26051893	26049476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050197_26050511_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.20	chr17	-	1696	3	NIC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1558	junction_1	15.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6763	False	NA	-20	True	AATAAA	-14	NA	26051917	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26050606_26050769_26051219_26051665
ES.14610.24	chr17	-	1202	7	NNC	ENSMUSG00000039615.10	novel	1320	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	715.991251498384	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6759	False	NA	-20	True	AATAAA	-14	NA	26051921	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050608_26050769_26050936_26051019_26051162_26051665
ES.14610.25	chr17	-	2214	6	NNC	ENSMUSG00000039615.10	novel	1701	6	NA	NA	-57	-1	intron_retention	FALSE	canonical	0	0	junction_3	629.763257105398	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6245	False	NA	-20	True	AATAAA	-14	NA	26052435	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050521_26050606_26050769_26050936_26051019
ES.14610.26	chr17	-	1219	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_5	546.882579312557	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6745	False	NA	-20	True	AATAAA	-14	NA	26051935	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050884_26051019_26051219_26051665
ES.14610.27	chr17	-	1499	5	FSM	ENSMUSG00000039615.10	ENSMUST00000235484.2	1498	5	-2	1	-2	-1	multi-exon	FALSE	canonical	3	1486	junction_1	49.4115371143218	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6785	False	NA	-20	True	AATAAA	-14	NA	26051895	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.29	chr17	-	1567	4	NIC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	14	-1	intron_retention	FALSE	canonical	3	1486	junction_1	43.1457478270519	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6801	False	NA	-20	True	AATAAA	-14	NA	26051879	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26049985_26050075_26050606_26050769_26051219_26051665
ES.14610.3	chr17	-	1387	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	418	-2	-2	2	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATTTTG	6763	False	NA	NA	False	AATACA	-12	NA	26051917	26049476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.31	chr17	-	1597	4	NIC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	1558	junction_1	24.9042611258038	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	6778	False	NA	-20	True	AATAAA	-14	NA	26051902	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.32	chr17	-	4832	12	Fusion	ENSMUSG00000039615.10_ENSMUSG00000025735.14	novel	1711	8	NA	NA	-57	-1	intron_retention	FALSE	canonical	1	1	junction_11	762.253292970669	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGCATGTGCTGGTGC	2567	False	NA	-20	True	AATAAA	-14	NA	26056113	26049610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26054172_26054250_26054328_26054443_26054557_26054718_26054868_26054942_26055168_26055384_26055547_26055961
ES.14610.35	chr17	-	6554	11	Fusion	ENSMUSG00000039615.10_ENSMUSG00000025735.14	novel	1711	8	NA	NA	-1129	1	intron_retention	FALSE	canonical	2	4	junction_9	764.896960380939	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGGCATGTGCTGGT	1282	False	NA	-22	True	AATAAA	-12	NA	26057398	26049612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26054172_26054250_26054352_26054443_26054557_26054718_26054868_26054942_26055168_26055384
ES.14610.36	chr17	-	1512	5	NIC	ENSMUSG00000039615.10	novel	1408	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	1558	junction_2	24.6018292002851	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGGCATGTGCTGG	6770	False	NA	-23	True	AATAAA	-11	NA	26051910	26049613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.38	chr17	-	6367	22	Fusion	ENSMUSG00000025735.14_ENSMUSG00000025733.18	novel	3189	19	NA	NA	1	1	intron_retention	FALSE	canonical	2	2	junction_2	61.6788184386741	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTAGCTGTCCTGGGGCT	6014	False	NA	NA	False	AATAAA	-16	NA	26063498	26053437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26054172_26054250_26054328_26054443_26054557_26054718_26054868_26054942_26055168_26055384_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.39	chr17	-	3338	23	Fusion	ENSMUSG00000025735.14_ENSMUSG00000025733.18	novel	3189	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	61.9366511875689	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTAGCTGTCCTGGGGC	6072	False	NA	NA	False	AATAAA	-15	NA	26063440	26053438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26054031_26054110_26054172_26054250_26054328_26054443_26054557_26054718_26055168_26058265_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.40	chr17	-	3431	6	ISM	ENSMUSG00000093593.2	ENSMUST00000176751.2	2790	17	3242	1	3242	-1	3prime_fragment	FALSE	canonical	2	4	junction_4	3.286335345031	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTAGCTGTCCTGGGG	1185	False	NA	NA	False	AATAAA	-14	NA	26057495	26053439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26054172_26054250_26054352_26054443_26054557_26054718_26054868_26054942_26055168_26055384
ES.14610.41	chr17	-	3500	2	NIC	ENSMUSG00000025735.14	novel	1711	8	NA	NA	-834	-3	intron_retention	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAGGTAGCTGTCCTGG	1577	False	NA	NA	False	AATAAA	-12	NA	26057103	26053441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26054557_26054718
ES.14610.42	chr17	-	4127	17	NNC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-4	1100	intron_retention	FALSE	canonical	0	0	junction_9	38.2506127401902	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGTGCTGCAGGCTGCC	6071	False	NA	NA	False	AATAAA	-20	NA	26063441	26056330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060646_26060730_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.43	chr17	-	2894	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	295	0	13	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	5982	False	NA	0	True	NA	NA	NA	26063530	26057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.44	chr17	-	3275	17	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	77	0	intron_retention	FALSE	canonical	3	134	junction_16	11.2275818300291	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	5764	False	NA	0	True	NA	NA	NA	26063748	26057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228
ES.14610.45	chr17	-	3126	16	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-19	0	intron_retention	FALSE	canonical	3	133	junction_15	12.0081453836783	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	6056	False	NA	0	True	NA	NA	NA	26063456	26057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.46	chr17	-	2957	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_17	11.5985323018515	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	5996	False	NA	0	True	NA	NA	NA	26063516	26057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.47	chr17	-	3075	17	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_16	38.0441766240249	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6014	False	NA	-2	True	NA	NA	NA	26063498	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063369
ES.14610.48	chr17	-	3049	17	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	133	junction_16	11.9523794702143	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	5990	False	NA	-2	True	NA	NA	NA	26063522	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.49	chr17	-	2847	19	NNC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	35.1994318135961	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6003	False	NA	-2	True	NA	NA	NA	26063509	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060087_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.5	chr17	-	1583	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	-42	-133	-8	2	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATTTTG	6745	False	NA	NA	False	AATACA	-12	NA	26051935	26049476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.50	chr17	-	3025	17	NNC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	2	-2	intron_retention	FALSE	canonical	1	4	junction_16	37.1327327805267	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6010	False	NA	-2	True	NA	NA	NA	26063502	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063283_26063373
ES.14610.52	chr17	-	3501	13	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	5	-2	intron_retention	FALSE	canonical	3	134	junction_12	11.8626397661828	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	5974	False	NA	-2	True	NA	NA	NA	26063538	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059310_26059411_26059543_26059624_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228
ES.14610.53	chr17	-	2813	19	NNC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	36.1003830218045	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6014	False	NA	-2	True	NA	NA	NA	26063498	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059906_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.54	chr17	-	2835	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_17	36.6978686576461	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	5969	False	NA	-2	True	NA	NA	NA	26063543	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063520
ES.14610.55	chr17	-	3616	13	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	2	-2	intron_retention	FALSE	canonical	3	133	junction_12	12.748365908356	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6010	False	NA	-2	True	NA	NA	NA	26063502	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059310_26059411_26059543_26059624_26060457_26060532_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.56	chr17	-	2807	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	36.913627794556	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGACTGCTGTTTTTGT	6014	False	NA	-2	True	NA	NA	NA	26063498	26057432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.57	chr17	-	2962	17	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	133	junction_16	11.9450238070085	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGACTGCTGTTTTTG	6072	False	NA	-3	True	NA	NA	NA	26063440	26057433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.58	chr17	-	8421	60	Fusion	ENSMUSG00000093593.2_ENSMUSG00000073434.13	novel	5962	41	NA	NA	-5	-3996	multi-exon	TRUE	canonical	0	0	junction_18	48.7141407533418	293	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGACTGCTGTTTTT	9829	False	NA	-4	True	NA	NA	NA	26080454	26057434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063545_26063674_26064117_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.59	chr17	-	2930	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	133	junction_17	11.3057538096384	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGCAATGTGACTGCTGT	6072	False	NA	-8	True	NA	NA	NA	26063440	26057438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.6	chr17	-	1297	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_5	546.882579312557	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATTTTG	6801	False	NA	NA	False	AATACA	-12	NA	26051879	26049476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050884_26051019_26051219_26051665
ES.14610.60	chr17	-	2697	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	335	157	9	-157	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGTCAGAGTTCCCT	6022	False	NA	NA	False	NA	NA	NA	26063490	26057587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.61	chr17	-	1806	11	NNC	ENSMUSG00000093593.2	novel	2790	17	NA	NA	-87	-4372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.9450742890029	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGATTTTGATCTCTC	8688	False	NA	-1	True	ATTAAA	-20	NA	26060824	26057810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059039_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730
ES.14610.62	chr17	-	2802	16	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	134	junction_15	11.5323699019566	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGGATTTTGATCTCT	6010	False	NA	-2	True	ATTAAA	-19	NA	26063502	26057811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228
ES.14610.63	chr17	-	2584	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	16	-1	intron_retention	FALSE	canonical	0	0	junction_3	37.0853313226127	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	6029	False	NA	-3	True	ATTAAA	-18	NA	26063483	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059195_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228
ES.14610.64	chr17	-	2480	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	327	382	1	-1	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	6014	False	NA	-3	True	ATTAAA	-18	NA	26063498	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.65	chr17	-	2860	15	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	1	-1	intron_retention	FALSE	canonical	3	133	junction_14	11.360736179078	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	6009	False	NA	-3	True	ATTAAA	-18	NA	26063503	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063288_26063373
ES.14610.66	chr17	-	2306	14	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	137	junction_1	10.3392170053648	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	7376	False	NA	-3	True	ATTAAA	-18	NA	26062136	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061263_26061339_26061393_26062080
ES.14610.67	chr17	-	2588	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	133	junction_17	11.5734453244572	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	5995	False	NA	-3	True	ATTAAA	-18	NA	26063517	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.68	chr17	-	2589	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	13	-1	intron_retention	FALSE	canonical	3	133	junction_17	11.5985323018515	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	5982	False	NA	-3	True	ATTAAA	-18	NA	26063530	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.70	chr17	-	3573	14	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	8	-1	intron_retention	FALSE	canonical	3	133	junction_13	12.0034511802517	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGGATTTTGATCTC	6100	False	NA	-3	True	ATTAAA	-18	NA	26063412	26057812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26061066_26061153_26061393_26062080_26063145_26063228_26063288_26063373
ES.14610.71	chr17	-	2787	16	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_15	11.805083650699	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTGGATTTTGATCT	6013	False	NA	-4	True	ATTAAA	-17	NA	26063499	26057813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059953_26060025_26060111_26060335_26060457_26060532_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.72	chr17	-	2460	19	NNC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	35.1994318135961	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTTGGATTTTGATC	6008	False	NA	-5	True	ATTAAA	-16	NA	26063504	26057814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060087_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.73	chr17	-	2056	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	323	810	2	7	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGTGTGGCTGGCTA	6010	False	NA	NA	False	NA	NA	NA	26063502	26058240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ES.14610.74	chr17	-	6025	39	NIC	ENSMUSG00000073434.13	novel	5991	41	NA	NA	48	1	intron_retention	FALSE	canonical	2	3	junction_37	18.7443066148341	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTATTGTCCCATA	9974	False	NA	NA	False	AATAAA	-24	NA	26080309	26063743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079628_26079792_26079880
ES.14610.75	chr17	-	5886	38	ISM	ENSMUSG00000073434.13	ENSMUST00000177170.8	5946	40	315	0	315	0	intron_retention	FALSE	canonical	3	31	junction_22	16.2422313845919	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTTTATTGTCCCAT	7364	False	NA	NA	False	AATAAA	-23	NA	26080042	26063744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345
ES.14610.76	chr17	-	7352	38	NIC	ENSMUSG00000073434.13	novel	5991	41	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_35	17.3108055362146	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTTTATTGTCCCAT	9835	False	NA	NA	False	AATAAA	-23	NA	26080448	26063744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.78	chr17	-	5916	41	NNC	ENSMUSG00000073434.13	novel	5991	41	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	19.4392483136566	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTTTATTGTCCCAT	9837	False	NA	NA	False	AATAAA	-23	NA	26080446	26063744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078380_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.79	chr17	-	4149	28	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.1632590151692	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	7276	False	NA	NA	False	AATAAA	-22	NA	26074812	26063745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064438_26064738_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732
ES.14610.8	chr17	-	1292	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	399	112	-9	-1	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTTGCCAGTTGCCT	6744	False	NA	0	True	AATAAA	-34	NA	26051936	26049590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.81	chr17	-	6004	41	FSM	ENSMUSG00000073434.13	ENSMUST00000079461.15	5991	41	-14	1	12	0	multi-exon	FALSE	canonical	2	3	junction_38	18.7159691173073	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9820	False	NA	NA	False	AATAAA	-22	NA	26080463	26063745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079628_26079792_26079880_26080058_26080158
ES.14610.82	chr17	-	5705	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_40	18.9926136958556	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9799	False	NA	NA	False	AATAAA	-22	NA	26080484	26063745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080424
ES.14610.83	chr17	-	8012	36	NIC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-8	0	intron_retention	FALSE	canonical	3	26	junction_35	16.5775850632899	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9826	False	NA	NA	False	AATAAA	-22	NA	26080457	26063745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26074209_26074274_26074406_26074481_26074644_26074732_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078900_26078992_26079108_26079345_26079792_26079880
ES.14610.85	chr17	-	6527	40	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-11	0	intron_retention	TRUE	non_canonical	0	0	junction_13	20.8221863669958	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	9823	False	NA	NA	False	AATAAA	-21	NA	26080460	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068969_26069008_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.86	chr17	-	6071	29	NNC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	1876	0	intron_retention	FALSE	canonical	3	8	junction_22	17.809937606601	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	5764	False	NA	NA	False	AATAAA	-21	NA	26076324	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072862_26073011_26073152_26073503_26074209_26074274_26074406_26074481_26074644_26074732_26075994_26076072_26076219_26076298
ES.14610.87	chr17	-	6417	31	NIC	ENSMUSG00000073434.13	novel	6195	39	NA	NA	-699	0	intron_retention	FALSE	canonical	3	33	junction_27	15.6731901312046	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	8507	False	NA	NA	False	AATAAA	-21	NA	26078899	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070922_26071129_26071259_26071371_26071534_26071799_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073
ES.14610.88	chr17	-	7383	38	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	12	0	intron_retention	FALSE	canonical	1	3	junction_32	20.2906564153256	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	9820	False	NA	NA	False	AATAAA	-21	NA	26080463	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064972_26065104_26065213_26065389_26065497_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072862_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.89	chr17	-	5959	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	19.4627689448341	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	9808	False	NA	NA	False	AATAAA	-21	NA	26080475	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070807_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.9	chr17	-	1421	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	-11	-2	11	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6776	False	NA	-17	True	AATAAA	-17	NA	26051904	26049607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ES.14610.90	chr17	-	6084	40	NNC	ENSMUSG00000073434.13	novel	5946	40	NA	NA	-9	0	intron_retention	FALSE	canonical	1	2	junction_11	20.0963491177688	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTTTTATTGTCCC	9825	False	NA	NA	False	AATAAA	-21	NA	26080458	26063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068223_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072862_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880
ES.14610.91	chr17	-	5716	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	20.7001811586276	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTGTTTTATTGTCC	9806	False	NA	NA	False	AATAAA	-20	NA	26080477	26063747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079128_26079345_26079517_26079682_26079792_26079880_26080058_26080424
ES.14610.92	chr17	-	5929	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_37	19.2953362240724	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTGTTTTATTGTCC	9822	False	NA	NA	False	AATAAA	-20	NA	26080461	26063747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079091_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.94	chr17	-	6100	39	NNC	ENSMUSG00000073434.13	novel	5946	40	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_35	21.9527476684334	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTGTTTTATTGTCC	9837	False	NA	NA	False	AATAAA	-20	NA	26080446	26063747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068223_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078901_26078992_26079108_26079345_26079517_26079682_26079792_26079880
ES.14610.95	chr17	-	5946	41	FSM	ENSMUSG00000073434.13	ENSMUST00000176923.9	5962	41	14	2	-12	0	multi-exon	FALSE	canonical	3	25	junction_38	17.4845646214025	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTGTTTTATTGTCC	9822	False	NA	NA	False	AATAAA	-20	NA	26080461	26063747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.98	chr17	-	5910	41	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_35	18.9245871817591	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATACATTGTTTTATTGTC	9848	False	NA	NA	False	AATAAA	-19	NA	26080435	26063748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078458_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14610.99	chr17	-	6022	40	NNC	ENSMUSG00000073434.13	novel	5962	41	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	20.1076001018034	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATACATTGTTTTATTGT	9837	False	NA	NA	False	AATAAA	-18	NA	26080446	26063749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26064200_26064348_26064434_26064552_26064889_26064967_26065120_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ES.14611.10	chr17	-	719	4	NIC	ENSMUSG00000025732.7	novel	842	5	NA	NA	206	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	131.413681006034	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTTCGGGTGTTGGTG	8010	False	NA	-8	True	AATAAA	-11	NA	26087490	26082675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26083014_26083176_26083327_26083567_26083696_26087387
ES.14611.2	chr17	-	837	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	6	-1	6	1	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGGTGTTGGTGATTGG	7768	False	NA	-3	True	AATAAA	-16	NA	26087732	26082670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ES.14611.3	chr17	-	1081	5	NNC	ENSMUSG00000025732.7	novel	945	6	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.667543066141	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	8171	False	NA	-4	True	AATAAA	-15	NA	26087329	26082671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26083014_26083224_26083327_26083567_26083696_26084508_26084642_26086953
ES.14611.4	chr17	-	2706	3	NNC	ENSMUSG00000025732.7	novel	842	5	NA	NA	208	0	intron_retention	FALSE	non_canonical	0	0	junction_2	158	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	8012	False	NA	-4	True	AATAAA	-15	NA	26087488	26082671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26083327_26083567_26084860_26086729
ES.14611.5	chr17	-	774	5	NNC	ENSMUSG00000025732.7	novel	945	6	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.739485568025	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	8002	False	NA	-4	True	AATAAA	-15	NA	26087498	26082671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26083008_26083228_26083327_26083567_26083696_26084540_26084642_26087387
ES.14611.6	chr17	-	778	5	NIC	ENSMUSG00000025732.7	novel	738	5	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	123.944291921815	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCGGGTGTTGGTGATT	7799	False	NA	-5	True	AATAAA	-14	NA	26087701	26082672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26082940_26083176_26083327_26083567_26083696_26087387_26087518_26087598
ES.14611.7	chr17	-	1026	5	ISM	ENSMUSG00000025732.7	ENSMUST00000237080.2	945	6	-1	1	-1	0	intron_retention	FALSE	canonical	3	13	junction_4	135.241450746434	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCGGGTGTTGGTGATT	7791	False	NA	-5	True	AATAAA	-14	NA	26087709	26082672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26083014_26083224_26083327_26083567_26083696_26084508_26084642_26087387
ES.14611.8	chr17	-	736	5	FSM	ENSMUSG00000025732.7	ENSMUST00000235806.2	738	5	0	2	0	-1	multi-exon	FALSE	canonical	3	11	junction_1	120.520485810504	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGGGTGTTGGTGAT	7792	False	NA	-6	True	AATAAA	-13	NA	26087708	26082673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26082940_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ES.14612.1	chr17	-	2497	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	-26	-5	-13	5	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCTTCATCTGACTG	NA	False	NA	4	True	AGTAAA	-22	NA	26138714	26101082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ES.14612.2	chr17	-	7943	6	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	5	0	intron_retention	FALSE	canonical	3	152	junction_5	28.5475042692001	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138680	26101087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26102883_26103553_26103777_26104048_26109673_26110259_26110321_26138338_26138524_26138625
ES.14612.3	chr17	-	2358	7	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	79.9284402172065	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTGTCTGGCTTCATC	NA	False	NA	-2	True	AGTAAA	-16	NA	26138672	26101088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138433_26138625
ES.14612.6	chr17	-	3429	5	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	152	junction_4	32.1820990614348	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTGTCTGGCTTCATC	NA	False	NA	-2	True	AGTAAA	-16	NA	26138709	26101088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ES.14612.7	chr17	-	2474	7	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	81.0337721090548	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTGTCTGGCTTCATC	NA	False	NA	-2	True	AGTAAA	-16	NA	26138684	26101088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138537_26138625
ES.14612.8	chr17	-	3523	7	NNC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.0867585115598	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTGTCTGGCTTCATC	NA	False	NA	-2	True	AGTAAA	-16	NA	26138661	26101088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26102883_26103553_26103777_26104048_26105212_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ES.14612.9	chr17	-	2410	7	NNC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	102.53576611765	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGTGTCTGGCTTCA	NA	False	NA	-4	True	AGTAAA	-14	NA	26138693	26101090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26126803_26126931_26138625
ES.14613.1	chr17	-	7616	11	NNC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-1610	4588	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	84.011665856594	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGGTAATACTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	26157746	26140806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26157657
ES.14613.10	chr17	-	3446	8	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	102.269152689541	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160905	26145400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.11	chr17	-	2999	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	89.033632152805	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160908	26145400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150648_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.12	chr17	-	3166	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	106.702180727016	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160908	26145400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26158105_26158219_26160788
ES.14613.13	chr17	-	3850	8	NIC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	243	junction_4	23.03679399463	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160906	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.14	chr17	-	3162	10	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-9	0	intron_retention	FALSE	canonical	3	238	junction_4	25.1086527803553	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160918	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.15	chr17	-	6057	9	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-9	0	intron_retention	TRUE	non_canonical	0	0	junction_5	96.9110416825658	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160918	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26151078_26151327_26151380_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.16	chr17	-	3230	12	FSM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	3	0	1	0	multi-exon	FALSE	canonical	1	1	junction_7	110.581782308445	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160906	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153067_26153248_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.17	chr17	-	3581	9	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	243	junction_5	21.9199538092579	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160914	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.18	chr17	-	3466	10	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_4	90.8104796258479	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160908	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150187_26150295_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.19	chr17	-	3104	11	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	83.1363338138025	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160908	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160736
ES.14613.2	chr17	-	7509	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-1	4562	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	88.3641455694685	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTGCCAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	26160908	26140832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.20	chr17	-	3526	9	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	95.547027033812	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160908	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149561_26149931_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.21	chr17	-	3405	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	106.891464224076	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160905	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26157657_26158014_26160788
ES.14613.22	chr17	-	3053	11	Fusion	ENSMUSG00000025728.17_ENSMUSG00000090113.8	novel	3233	12	NA	NA	-339	0	multi-exon	FALSE	canonical	0	0	junction_10	84.5955081549842	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26161361	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161240
ES.14613.23	chr17	-	3003	11	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.3576863979113	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	False	NA	-6	True	AATAAA	-17	NA	26160908	26145401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149561_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.24	chr17	-	5974	8	NIC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	238	junction_4	24.2747874578223	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160928	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.25	chr17	-	3149	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	109.504518945208	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160911	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26154383_26154479_26155737_26156437_26160788
ES.14613.26	chr17	-	3019	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	83.4169057523069	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160920	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788_26160853_26160896
ES.14613.27	chr17	-	4238	9	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_5	96.5847264064044	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160908	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26151078_26151206_26153067_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.28	chr17	-	3509	13	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	119.727091290522	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160897	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26157657_26158014_26158105_26158219_26160788
ES.14613.29	chr17	-	4173	7	NIC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	243	junction_3	24.0883789408918	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160908	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.3	chr17	-	7621	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	113	-4561	0	4561	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTTGTGCCAGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	26160909	26140833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.30	chr17	-	6406	7	NIC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	268	junction_4	18.0431581369658	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCAGCTTGGGTGTCC	NA	False	NA	-7	True	AATAAA	-16	NA	26160937	26145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.31	chr17	-	3519	9	NNC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_4	95.6738437348474	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACCAGCTTGGGTGTC	NA	False	NA	-8	True	AATAAA	-15	NA	26160897	26145403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26151121_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.32	chr17	-	6642	7	NNC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	108.342050931298	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACCAGCTTGGGTGTC	NA	False	NA	-8	True	AATAAA	-15	NA	26160906	26145403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26151327_26151380_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.33	chr17	-	6320	8	NNC	ENSMUSG00000025728.17	novel	3278	10	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	102.269152689541	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACCAGCTTGGGTGTC	NA	False	NA	-8	True	AATAAA	-15	NA	26160906	26145403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26151327_26151380_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.34	chr17	-	2985	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.4169057523069	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160892	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146194_26146241_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.35	chr17	-	2697	8	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-40	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	100.888501802328	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160949	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.36	chr17	-	2954	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-16	-3	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	88.3641455694685	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160925	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.37	chr17	-	3130	12	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	107.461082711467	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160917	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26159796_26159869_26160788
ES.14613.38	chr17	-	3353	10	FSM	ENSMUSG00000025728.17	ENSMUST00000148045.8	3278	10	-78	3	-26	-3	multi-exon	FALSE	canonical	3	238	junction_4	24.6761743438263	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160935	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.39	chr17	-	3257	11	NNC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.3576863979113	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTACCAGCTTGGGTGT	NA	False	NA	-9	True	AATAAA	-14	NA	26160908	26145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149723_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.4	chr17	-	6407	12	NNC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	1	4553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.4169057523069	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCATTCTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	26160906	26140841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26142724_26143926_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.40	chr17	-	2951	10	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	56	-5	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	88.7315273767858	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTACCAGCTTGGGT	NA	False	NA	-11	True	AATAAA	-12	NA	26160966	26145406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.41	chr17	-	2256	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	93	824	-20	193	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGAACCCTGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	26160929	26146218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.43	chr17	-	6646	4	FSM	ENSMUSG00000025728.17	ENSMUST00000140304.2	1835	4	3	-4814	1	742	multi-exon	FALSE	canonical	3	268	junction_1	24.9844396019247	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTTCCTGGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	26160906	26148155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.44	chr17	-	1832	4	FSM	ENSMUSG00000025728.17	ENSMUST00000140304.2	1835	4	1	2	-1	-2	multi-exon	FALSE	canonical	3	268	junction_1	24.9844396019247	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCAGGCTTTTATCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	26160908	26152971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.5	chr17	-	7630	9	ISM	ENSMUSG00000025728.17	ENSMUST00000148045.8	3278	10	4560	-4560	-161	4553	3prime_fragment	FALSE	canonical	3	238	junction_4	20.4511613362176	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCATTCTTGTGCC	NA	False	NA	NA	False	NA	NA	NA	26156297	26140841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26151206_26153731_26153853_26153976_26154109_26155737
ES.14613.6	chr17	-	3108	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	65	0	-48	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTCCTGCTCGTC	NA	False	NA	1	True	AATAAA	-24	NA	26160957	26145394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.7	chr17	-	3480	9	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	238	junction_3	25.7945609576903	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTCCTGCTCGT	NA	False	NA	0	True	AATAAA	-23	NA	26160908	26145395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26150013_26150435_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ES.14613.8	chr17	-	2991	11	NIC	ENSMUSG00000025728.17	novel	2987	11	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	83.7198303868325	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTTGGGTGTCCTGCT	NA	False	NA	-3	True	AATAAA	-20	NA	26161823	26145398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161767
ES.14613.9	chr17	-	3491	13	Fusion	ENSMUSG00000025728.17_ENSMUSG00000090113.8	novel	2987	11	NA	NA	6	0	multi-exon	FALSE	canonical	0	0	junction_10	120.154645723288	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26163900	26145400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26162913_26163293_26163437_26163567_26163850
ES.14614.1	chr17	+	156	1	Intergenic	novelGene_12233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATATTTTTTTA	8672	False	NA	NA	False	NA	NA	NA	26168345	26168501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26168300_26168500
ES.14615.1	chr17	+	5128	1	Intergenic	novelGene_12234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTTAAAAGGAGTTAAAC	NA	False	NA	NA	False	NA	NA	NA	26185959	26191087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26186000_26191100
ES.14616.1	chr17	-	4928	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	6	1	intron_retention	TRUE	canonical	0	0	junction_4	23.9282260103001	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATTCTGTTGTCACCC	1728	False	NA	-5	True	AATAAA	-22	NA	26204764	26177336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.11	chr17	-	4608	11	NIC	ENSMUSG00000037326.11	novel	4555	12	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_4	29.3189358606345	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1772	False	NA	-9	True	AATAAA	-18	NA	26204720	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.12	chr17	-	4790	11	NNC	ENSMUSG00000037326.11	novel	4555	12	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_3	32.7788041270575	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1728	False	NA	-9	True	AATAAA	-18	NA	26204764	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179559_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184434_26204531
ES.14616.13	chr17	-	5536	9	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	38	0	intron_retention	FALSE	canonical	0	0	junction_3	26.2345192446898	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1760	False	NA	-9	True	AATAAA	-18	NA	26204732	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26184502_26204444
ES.14616.14	chr17	-	6618	1	NIC	ENSMUSG00000037326.11	novel	4922	10	NA	NA	-1224	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	NA	False	NA	-9	True	AATAAA	-18	NA	26183958	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26177300_26184000
ES.14616.15	chr17	-	4934	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_4	29.4659125092029	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1733	False	NA	-9	True	AATAAA	-18	NA	26204759	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180862_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.16	chr17	-	4866	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-33	-1	intron_retention	FALSE	canonical	0	0	junction_4	30.9433353082695	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	1779	False	NA	-10	True	AATAAA	-17	NA	26204713	26177341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181863_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.17	chr17	-	5212	12	FSM	ENSMUSG00000037326.11	ENSMUST00000212520.2	5216	12	6	-2	6	-1	multi-exon	FALSE	canonical	0	0	junction_4	31.7674920904847	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	1728	False	NA	-10	True	AATAAA	-17	NA	26204764	26177341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ES.14616.18	chr17	-	4495	11	NNC	ENSMUSG00000037326.11	novel	4555	12	NA	NA	710	-1	intron_retention	FALSE	canonical	0	0	junction_4	33.4005987970276	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCATTCTGTTGT	2548	False	NA	-10	True	AATAAA	-17	NA	26203944	26177341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26203780
ES.14616.20	chr17	-	2665	2	FSM	ENSMUSG00000037326.11	ENSMUST00000211917.2	355	2	104	-2414	-12	0	multi-exon	FALSE	canonical	3	3	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1826	False	NA	-11	True	AATAAA	-16	NA	26204666	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26179786_26204444
ES.14616.21	chr17	-	5242	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_3	33.2097877138653	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1776	False	NA	-11	True	AATAAA	-16	NA	26204716	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ES.14616.22	chr17	-	4800	12	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_4	34.0021875815451	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1867	False	NA	-11	True	AATAAA	-16	NA	26204625	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ES.14616.23	chr17	-	5661	8	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_4	28.4102597162162	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1728	False	NA	-11	True	AATAAA	-16	NA	26204764	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26184502_26204444
ES.14616.24	chr17	-	2475	5	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_4	32.6831378542514	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1778	False	NA	-11	True	AATAAA	-16	NA	26204714	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26204444
ES.14616.25	chr17	-	5738	10	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	38	0	intron_retention	FALSE	canonical	2	6	junction_7	23.4857456111911	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1760	False	NA	-11	True	AATAAA	-16	NA	26204732	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182280_26182430_26183000_26184502_26204444
ES.14616.26	chr17	-	6563	7	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	68	junction_4	7.80313327381308	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1712	False	NA	-11	True	AATAAA	-16	NA	26204780	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26179538_26179623_26180847_26180927_26181054_26181644_26182120_26182220_26184502_26204444
ES.14616.27	chr17	-	5475	10	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_4	25.0953736329583	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1746	False	NA	-11	True	AATAAA	-16	NA	26204746	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26184502_26204444
ES.14616.28	chr17	-	3124	10	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-314	0	intron_retention	FALSE	canonical	0	0	junction_1	30.9782878963259	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	NA	False	NA	-11	True	AATAAA	-16	NA	26183048	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178683_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000
ES.14616.29	chr17	-	3058	6	NNC	ENSMUSG00000037326.11	novel	4922	10	NA	NA	616	0	intron_retention	FALSE	canonical	0	0	junction_2	38.7318989981127	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	NA	False	NA	-11	True	AATAAA	-16	NA	26182118	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26179559_26179623_26179786_26180693_26180847_26180927_26181054_26181644
ES.14616.3	chr17	-	5142	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_4	33.1495098002972	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCATTCTGTTGTCACC	1869	False	NA	-6	True	AATAAA	-21	NA	26204623	26177337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ES.14616.30	chr17	-	4843	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_4	29.6966328057576	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1747	False	NA	-11	True	AATAAA	-16	NA	26204745	26177342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182280_26182430_26183000_26184502_26204444
ES.14616.31	chr17	-	4584	9	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-1749	0	intron_retention	FALSE	canonical	0	0	junction_3	33.0338368192373	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	26184483	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181791_26181935_26182120_26182220_26182430_26183000
ES.14616.32	chr17	-	4623	12	NNC	ENSMUSG00000037326.11	novel	3520	12	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_5	32.6228130896816	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1843	False	NA	-12	True	AATAAA	-15	NA	26204649	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179206_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181791_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.33	chr17	-	4688	10	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_4	32.2666360575306	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1752	False	NA	-12	True	AATAAA	-15	NA	26204740	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26183000_26184502_26204444
ES.14616.34	chr17	-	5546	9	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_4	26.5938785249538	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1775	False	NA	-12	True	AATAAA	-15	NA	26204717	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26184502_26204444
ES.14616.35	chr17	-	5088	9	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	25.4803846124818	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1726	False	NA	-12	True	AATAAA	-15	NA	26204766	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.37	chr17	-	4904	7	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-1414	0	intron_retention	FALSE	canonical	0	0	junction_2	35.9567641604315	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	26184148	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26179786_26180693_26180847_26180927_26181054_26181724_26181869_26181935_26182120_26182220
ES.14616.38	chr17	-	4844	12	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_3	29.5268472875754	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1682	False	NA	-12	True	AATAAA	-15	NA	26204810	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179188_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.39	chr17	-	4134	5	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	406	0	intron_retention	FALSE	canonical	3	68	junction_3	7.69740215917033	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	26182328	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26179538_26179623_26181054_26181644_26182120_26182220
ES.14616.4	chr17	-	4869	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_4	30.3802567467755	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCATTCTGTTGTCACC	1708	False	NA	-6	True	AATAAA	-21	NA	26204784	26177337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181791_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.40	chr17	-	4508	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	33.2176158084833	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1809	False	NA	-12	True	AATAAA	-15	NA	26204683	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182280_26182430_26183000_26184502_26204444
ES.14616.41	chr17	-	4883	12	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_4	34.7860045952748	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1728	False	NA	-12	True	AATAAA	-15	NA	26204764	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179365_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ES.14616.42	chr17	-	5059	9	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_2	26.3032198599335	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1742	False	NA	-12	True	AATAAA	-15	NA	26204750	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.43	chr17	-	4427	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	35.1176593753057	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1815	False	NA	-12	True	AATAAA	-15	NA	26204677	26177343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179365_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181724_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.45	chr17	-	4877	10	NIC	ENSMUSG00000037326.11	novel	4536	11	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_3	29.8952905164296	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAAGCTTGCATTCTG	1845	False	NA	-14	True	AATAAA	-13	NA	26204647	26177345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178704_26178780_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.46	chr17	-	5032	9	NIC	ENSMUSG00000037326.11	novel	4922	10	NA	NA	-37	-1	intron_retention	FALSE	canonical	0	0	junction_3	25.3596012389785	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAAGCTTGCATTCTG	1775	False	NA	-14	True	AATAAA	-13	NA	26204717	26177345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26179538_26179623_26179786_26180693_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.47	chr17	-	4712	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	11	-5	intron_retention	FALSE	canonical	0	0	junction_3	29.5711007573272	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTAAGAAGCTTGCAT	1823	False	NA	-18	True	AATAAA	-9	NA	26204669	26177349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179038_26179430_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.48	chr17	-	835	2	ISM	ENSMUSG00000037326.11	ENSMUST00000041641.9	3520	12	-29	5376	-3	-2111	5prime_fragment	FALSE	canonical	3	80	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTAGCCCCTACTGGC	1809	False	NA	NA	False	NA	NA	NA	26204683	26183905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26184502_26204444
ES.14616.6	chr17	-	5237	10	NIC	ENSMUSG00000037326.11	novel	3520	12	NA	NA	-7	1	intron_retention	TRUE	canonical	0	0	junction_4	30.8968814599567	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGCATTCTGTTGTCA	1715	False	NA	-8	True	AATAAA	-19	NA	26204777	26177339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26184502_26204444
ES.14616.7	chr17	-	5602	5	NIC	ENSMUSG00000037326.11	novel	4536	11	NA	NA	-1044	0	intron_retention	FALSE	canonical	2	11	junction_1	24.2113093408845	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	NA	False	NA	-9	True	AATAAA	-18	NA	26183778	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178704_26178780_26181054_26181644_26181869_26181935_26182120_26182220
ES.14616.8	chr17	-	4573	11	NNC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_4	30.5844731849349	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1752	False	NA	-9	True	AATAAA	-18	NA	26204740	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26178708_26178780_26178960_26179365_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ES.14616.9	chr17	-	5723	9	NIC	ENSMUSG00000037326.11	novel	4555	12	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_4	32.6410401182315	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1819	False	NA	-9	True	AATAAA	-18	NA	26204673	26177340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26178708_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181869_26181935_26182120_26182220_26184502_26204444
ES.14617.1	chr17	+	163	1	Intergenic	novelGene_12239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCAACTTCTA	NA	False	NA	NA	False	NA	NA	NA	26263974	26264137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26264000_26264100
ES.14618.1	chr17	+	2453	2	Antisense	novelGene_ENSMUSG00000037098.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26264446	26267093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_26265036_26265229
ES.14619.1	chr17	+	175	1	Intergenic	novelGene_12240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26269737	26269912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26269700_26269900
ES.1462.1	chr1	+	2178	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	-15	3	-15	-3	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGTTATTTATTTCAGT	NA	False	NA	7	True	AATAAA	-13	NA	136342993	136367893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ES.1462.2	chr1	+	1900	2	FSM	ENSMUSG00000026404.13	ENSMUST00000129218.7	1364	2	24	-560	24	560	multi-exon	FALSE	canonical	3	59	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACAAATACTGAATG	NA	False	NA	NA	False	AATAAA	-15	NA	136343032	136346090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136343162_136344319
ES.1462.3	chr1	+	1927	6	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	25	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	30.1396748489429	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCAGTCCTTGTAT	NA	False	NA	15	True	AATAAA	-21	NA	136343033	136367901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136367490
ES.1462.4	chr1	+	1831	6	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	25	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.732137494637	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGACTCTATAAGATC	NA	False	NA	-42	True	AATAAA	-12	NA	136343033	136367844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136343162_136344319_136345135_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ES.1462.5	chr1	+	2004	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	29	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	23.4004985701872	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTATTTATTTCAG	NA	False	NA	6	True	AATAAA	-12	NA	136343037	136367892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136367490
ES.1462.6	chr1	+	1990	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	45	-41	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	25.5631027502966	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGATCTTTTTAAATTT	NA	False	NA	-31	True	AATAAA	-23	NA	136343053	136367855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ES.14620.1	chr17	-	5578	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	1409	-1604	1099	1604	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCTCTACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	26287110	26206405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.12	chr17	-	5191	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGAGCCGGCTTCTTTCT	NA	False	NA	-6	True	ATTAAA	-13	NA	26288504	26208015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.13	chr17	-	5118	13	NNC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.8062027474521	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGAGCCGGCTTCTTTCT	NA	False	NA	-6	True	ATTAAA	-13	NA	26288510	26208015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232826_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.14	chr17	-	1492	3	NNC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	318	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.5	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGAGCCGGCTTCTTTC	NA	False	NA	-7	True	ATTAAA	-12	NA	26287891	26208016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26208079_26255562_26255657_26286555
ES.14620.15	chr17	-	3653	14	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	1376	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	36.4839269141484	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGAGCCGGCTTCTTTC	228	False	NA	-7	True	ATTAAA	-12	NA	26286833	26208016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26230970_26231106_26232747_26232892_26234917_26235130_26243349_26243441_26255562_26255657_26286555
ES.14620.16	chr17	-	5142	15	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	28.6186217383731	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGAGCCGGCTTCTTTC	NA	False	NA	-7	True	ATTAAA	-12	NA	26288473	26208016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555_26288059_26288111
ES.14620.17	chr17	-	4992	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	3	254	3	-254	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGCCCCGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26288526	26208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.18	chr17	-	5063	14	NIC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	21	-254	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	31.8227338632705	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGCCCCGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26288498	26208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.19	chr17	-	5124	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	-4	263	-4	-254	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGCCCCGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26288523	26208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.20	chr17	-	3861	15	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	931	-254	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.4840419571437	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGCCCCGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26287278	26208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210249_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.21	chr17	-	4903	15	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	31	-254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	28.6186217383731	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGCCCCGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	26288488	26208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555_26288067_26288117
ES.14620.22	chr17	-	4956	14	NNC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	9	-256	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28.9876529520525	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26288510	26208274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210249_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.23	chr17	-	6277	8	ISM	ENSMUSG00000037098.19	ENSMUST00000148021.3	3333	12	9980	259	9980	-256	3prime_fragment	FALSE	canonical	3	64	junction_5	13.5631553730491	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26227454	26208274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524
ES.14620.24	chr17	-	4946	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	1	-256	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26288518	26208274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.25	chr17	-	4757	13	NNC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	12	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.9291541303346	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26288507	26208274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213299_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26243348_26243441_26255562_26255657_26286555
ES.14620.26	chr17	-	5043	15	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	38	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	35.4228105915395	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGGAGCCCCGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26288481	26208274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26274417_26274516_26286555
ES.14620.28	chr17	-	6108	7	NNC	ENSMUSG00000037098.19	novel	3271	12	NA	NA	11089	-258	intron_retention	TRUE	non_canonical	0	0	junction_3	33.9235251050883	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGGAGCCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	26226345	26208276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210846_26210933_26211638_26213159_26213301_26216902_26217007_26223524
ES.14620.29	chr17	-	4937	17	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	111	-258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.0803016663471	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGGAGCCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	26288098	26208276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26233862_26234009_26234557_26234654_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.3	chr17	-	5245	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	13	-9	3	0	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTTCTTTCTCCACAG	NA	False	NA	0	True	ATTAAA	-19	NA	26288516	26208009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.31	chr17	-	4815	12	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	30	-264	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	37.9218421981644	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATCAATACTGGAGCC	NA	False	NA	NA	False	NA	NA	NA	26288489	26208282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26286555
ES.14620.34	chr17	-	4697	13	NIC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	132	-374	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGAGTAGGTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	26288387	26208392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.35	chr17	-	4986	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	9	388	9	-379	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCATGTAGAGTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	26288510	26208397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.36	chr17	-	178	1	Intergenic	novelGene_12235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGCGATTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	26213785	26213607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26213600_26213800
ES.14620.37	chr17	-	4894	5	ISM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	45	22306	35	-7700	5prime_fragment	FALSE	canonical	3	82	junction_3	16.7984374273323	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGACAAAATTCATGAAT	NA	False	NA	NA	False	NA	NA	NA	26288484	26230324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.38	chr17	-	4708	6	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	9	-7706	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.8224240322754	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAATCAGGACAAAATTC	NA	False	NA	NA	False	NA	NA	NA	26288510	26230330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26232313_26232518_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.39	chr17	-	4880	5	NNC	ENSMUSG00000037098.19	novel	5249	14	NA	NA	46	-7707	intron_retention	FALSE	canonical	0	0	junction_3	36.3799395271625	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATCAGGACAAAATT	NA	False	NA	NA	False	NA	NA	NA	26288473	26230331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26232892_26234557_26234654_26234917_26235130_26255562_26255657_26286555
ES.14620.40	chr17	-	3266	6	ISM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	9	22327	9	-7712	5prime_fragment	FALSE	canonical	3	33	junction_1	30.8116860947271	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAATCAGGACA	NA	False	NA	NA	False	NA	NA	NA	26288510	26230336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.41	chr17	-	4602	2	NNC	ENSMUSG00000037098.19	novel	1652	6	NA	NA	2264	-7738	intron_retention	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	9045	False	NA	NA	False	NA	NA	NA	26235170	26230362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26232313_26232518
ES.14620.43	chr17	-	171	1	Intergenic	novelGene_12236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26232516	26232345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26232300_26232500
ES.14620.44	chr17	-	4683	1	Intergenic	novelGene_12237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGGGACTATGATTT	2211	False	NA	NA	False	NA	NA	NA	26250654	26245971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26246000_26250700
ES.14620.45	chr17	-	200	1	Intergenic	novelGene_12238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACCCACCCCCCCCC	NA	False	NA	NA	False	CATAAA	-8	NA	26257604	26257404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26257400_26257600
ES.14620.46	chr17	-	3125	2	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	161	-12701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGTCTGAGTTTTGC	NA	False	NA	NA	False	AATATA	-22	NA	26288048	26267945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26269578_26286555
ES.14620.47	chr17	-	2302	1	NIC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	1	-30972	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGTTGAAAAGTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	26288518	26286216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26286200_26288500
ES.14620.5	chr17	-	3222	12	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	2359	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.9893031301427	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGCTTCTTTCTCCACA	9140	False	NA	-1	True	ATTAAA	-18	NA	26235075	26208010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211682_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917
ES.14620.6	chr17	-	5391	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	-10	2	0	-2	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGCTTCTTTCTCCAC	NA	False	NA	-2	True	ATTAAA	-17	NA	26288529	26208011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ES.14620.8	chr17	-	5140	15	NNC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	54	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	28.6186217383731	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGGCTTCTTTCTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	26288465	26208012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555_26288067_26288117
ES.14620.9	chr17	-	4376	8	ISM	ENSMUSG00000037098.19	ENSMUST00000148021.3	3333	12	12141	-1	12141	1	3prime_fragment	FALSE	canonical	3	64	junction_5	13.5631553730491	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGAGCCGGCTTCTTTCTC	NA	False	NA	-5	True	ATTAAA	-14	NA	26225293	26208014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524
ES.14621.1	chr17	-	343	1	Intergenic	novelGene_12241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	26293440	26293097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26293100_26293400
ES.14621.2	chr17	-	177	1	Intergenic	novelGene_12242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	26293440	26293263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26293300_26293400
ES.14622.1	chr17	+	177	1	Intergenic	novelGene_12243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTTAAGACAC	NA	False	NA	NA	False	NA	NA	NA	26312074	26312251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26312100_26312300
ES.14623.1	chr17	-	2041	9	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	57.9427249531811	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTGTGTTTCCT	NA	False	NA	-4	True	NA	NA	NA	26309261	26300184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26309070
ES.14623.10	chr17	-	2004	9	NNC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	97	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.5387216439856	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGACTGATTCT	NA	False	NA	-31	True	NA	NA	NA	26309097	26300211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307069_26307902_26307972_26308937
ES.14623.11	chr17	-	2610	9	NNC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	-1223	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.7367924733158	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGACTGATTCT	NA	False	NA	-31	True	NA	NA	NA	26310534	26300211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26309747
ES.14623.12	chr17	-	2489	9	NNC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	149	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.6149273601936	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAAAAAAATTGACTGA	NA	False	NA	-35	True	NA	NA	NA	26309045	26300215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26301423_26301474_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ES.14623.13	chr17	-	1568	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	217	439	100	3	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGGTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	26309094	26300623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ES.14623.14	chr17	-	959	6	FSM	ENSMUSG00000024177.10	ENSMUST00000236547.2	926	6	-34	1	-18	-1	multi-exon	FALSE	canonical	3	25	junction_1	147.011019995101	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTACTTACTAGTT	NA	False	NA	-3	True	ATTAAA	-19	NA	26314481	26310710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26311127_26311480_26311532_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ES.14623.15	chr17	-	928	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	75	3	-38	-1	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTACTTACTAGTT	NA	False	NA	-3	True	ATTAAA	-19	NA	26314501	26310710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ES.14623.16	chr17	-	1239	4	NIC	ENSMUSG00000024177.10	novel	638	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	25	junction_1	137.659806124454	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTACTTACTAGTT	NA	False	NA	-3	True	ATTAAA	-19	NA	26314456	26310710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26311127_26311480_26311532_26312590_26313245_26314338
ES.14623.17	chr17	-	1018	4	NIC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	304	junction_1	22.7596133534821	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCTACTTACTAGTT	NA	False	NA	-3	True	ATTAAA	-19	NA	26314462	26310710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26311127_26312590_26312935_26313110_26313245_26314338
ES.14623.18	chr17	-	1090	5	NNC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	140.316606287353	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTCTACTTACTAGT	NA	False	NA	-4	True	ATTAAA	-18	NA	26314445	26310711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314119
ES.14623.19	chr17	-	1202	3	FSM	ENSMUSG00000024177.10	ENSMUST00000236112.2	1176	3	-30	4	-14	-4	multi-exon	FALSE	canonical	3	304	junction_1	7.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAAATGGTCTACTT	NA	False	NA	-10	True	ATTAAA	-12	NA	26314477	26310717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26311127_26312590_26313245_26314338
ES.14623.2	chr17	-	4531	13	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	-18	0	multi-exon	FALSE	canonical	3	125	junction_7	79.642386467397	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTGTGTTTCCT	NA	False	NA	-4	True	NA	NA	NA	26314481	26300184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ES.14623.20	chr17	-	2309	3	NIC	ENSMUSG00000024177.10	novel	638	5	NA	NA	-15	-8	intron_retention	FALSE	canonical	3	25	junction_1	147	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAAATGGAAATGGTCT	NA	False	NA	-14	True	ATTAAA	-8	NA	26314478	26310721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26311127_26311480_26313245_26314338
ES.14623.21	chr17	-	2075	1	NIC	ENSMUSG00000024177.10	novel	1006	5	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGAGAAGTGGGAATCT	NA	False	NA	NA	False	NA	NA	NA	26314445	26312370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26312400_26314400
ES.14623.3	chr17	-	2115	8	NIC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	60.1518486661814	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATAGTGCTTGTGTTTC	NA	False	NA	-6	True	NA	NA	NA	26309273	26300186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26308937
ES.14623.4	chr17	-	7227	9	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	2	-3	intron_retention	FALSE	canonical	3	125	junction_7	57.135256190902	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATAGTGCTTGTGTTT	NA	False	NA	-7	True	NA	NA	NA	26314445	26300187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26313245_26314338
ES.14623.5	chr17	-	2058	9	NNC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	59.7367924733158	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGAAATAGTGCTTGT	NA	False	NA	-11	True	NA	NA	NA	26309154	26300191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307970_26308937
ES.14623.6	chr17	-	1985	9	NNC	ENSMUSG00000036775.14	novel	2224	9	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.1405899108218	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309097	26300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302903_26302980_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ES.14623.7	chr17	-	2321	12	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	-16	0	multi-exon	FALSE	canonical	2	3	junction_8	95.7316324656874	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26314479	26300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ES.14623.8	chr17	-	3978	7	ISM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	48	19	1	0	intron_retention	FALSE	canonical	3	145	junction_5	23.4283778544074	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGATTCTACCATGGA	NA	False	NA	-23	True	NA	NA	NA	26309263	26300203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995
ES.14623.9	chr17	-	4699	11	Fusion	ENSMUSG00000036775.14_ENSMUSG00000024177.10	novel	2224	9	NA	NA	-18	-8	intron_retention	FALSE	canonical	0	0	junction_1	86.7848489080899	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGACTGATTCT	NA	False	NA	-31	True	NA	NA	NA	26314481	26300211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_26301126_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937_26311127_26312590_26313245_26314338
ES.14624.1	chr17	-	409	1	FSM	ENSMUSG00000049124.5	ENSMUST00000053575.5	231	1	-36	-142	-36	142	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGCTGTCAGGATAAC	NA	False	NA	NA	False	AATAAA	-38	NA	26318231	26317822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26317800_26318200
ES.14625.1	chr17	+	156	1	Intergenic	novelGene_12244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	26323826	26323982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26323800_26324000
ES.14626.1	chr17	+	178	1	Intergenic	novelGene_12245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTATATTTAA	NA	False	NA	NA	False	NA	NA	NA	26326462	26326640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26326500_26326600
ES.14627.1	chr17	-	181	1	Intergenic	novelGene_12246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAATACCCA	NA	False	NA	NA	False	NA	NA	NA	26327423	26327242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26327200_26327400
ES.14628.1	chr17	-	236	1	Intergenic	novelGene_12247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGCTGAGGAGGGAAGA	NA	False	NA	NA	False	AAGAAA	-39	NA	26328981	26328745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26328700_26329000
ES.14629.1	chr17	+	3577	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-112	-1	-95	1	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTCTTTTTTTTTTTT	NA	False	NA	21	True	NA	NA	NA	26332177	26342229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.10	chr17	+	2558	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	117.427519015869	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332265	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339534_26339660_26340513_26340631_26340911
ES.14629.100	chr17	+	1007	5	FSM	ENSMUSG00000024181.10	ENSMUST00000236166.2	1047	5	38	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_2	700.577752644201	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342511	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345265
ES.14629.101	chr17	+	4498	15	Fusion	ENSMUSG00000024181.10_ENSMUSG00000024182.18	novel	2129	6	NA	NA	1	-1	multi-exon	FALSE	canonical	0	0	junction_2	501.267643081019	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26342518	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244_26345600_26356179_26356329_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.102	chr17	+	1008	5	NNC	ENSMUSG00000024181.10	novel	1046	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	613.108677152754	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342518	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26342824_26343529_26343682_26344242_26344366_26344451_26344539_26345244
ES.14629.103	chr17	+	1812	3	NIC	ENSMUSG00000024181.10	novel	1134	4	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	704	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342519	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26343683_26344230_26344539_26345244
ES.14629.104	chr17	+	4055	14	Fusion	ENSMUSG00000024181.10_ENSMUSG00000024182.18	novel	2129	6	NA	NA	-82	-3	multi-exon	FALSE	canonical	0	0	junction_5	445.598845780537	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGATATGTGATATAC	NA	False	NA	8	True	AATAAA	-16	NA	26342614	26414782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26356179_26356329_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.106	chr17	+	3727	11	NNC	ENSMUSG00000024182.18	novel	2129	6	NA	NA	-7505	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.233705772307	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGATATGTGATATACT	NA	False	NA	9	True	AATAAA	-17	NA	26350156	26414783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26350422_26356179_26356329_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.107	chr17	+	3703	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	-292	-521	-30	4	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGATATACTATCTGT	NA	False	NA	15	True	AATAAA	-23	NA	26357631	26414789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.109	chr17	+	3801	11	FSM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	-21	-3	-21	3	multi-exon	FALSE	canonical	3	153	junction_9	74.468852549237	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGATATACTATCTG	NA	False	NA	14	True	AATAAA	-22	NA	26357640	26414788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.11	chr17	+	3041	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	115.94239470051	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332265	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.110	chr17	+	7258	9	NIC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	227	junction_7	45.5382737375935	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357647	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.111	chr17	+	3546	9	NIC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	-13	5	intron_retention	FALSE	canonical	0	0	junction_2	112.325141887291	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGATATACTATCTGTA	NA	False	NA	16	True	AATAAA	-24	NA	26357648	26414790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26361591_26362551_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.113	chr17	+	2921	12	NNC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	134.869817856313	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357661	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26361616_26362469_26362551_26392613_26392755_26401463_26401561_26403150_26403293_26406682_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.116	chr17	+	3950	4	NIC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	6	-1255	intron_retention	FALSE	canonical	2	25	junction_1	146.180254024498	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAGAGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26357667	26406514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150
ES.14629.117	chr17	+	3648	10	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_9	106.751817864072	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357668	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413921
ES.14629.118	chr17	+	5084	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	7	-1	intron_retention	FALSE	canonical	3	177	junction_8	59.5061984529426	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357668	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26413081_26413908
ES.14629.119	chr17	+	3624	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	9	-3	intron_retention	FALSE	canonical	0	0	junction_2	114.842027838351	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGATATGTGATATAC	NA	False	NA	8	True	AATAAA	-16	NA	26357670	26414782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26361591_26362551_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.12	chr17	+	3294	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	176.299520230015	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332265	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340328_26340407_26340513_26340631_26340911
ES.14629.120	chr17	+	4843	6	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	10	-1277	intron_retention	FALSE	non_canonical	0	0	junction_5	132.756016812798	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	26357671	26406492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403901_26403940
ES.14629.122	chr17	+	3432	12	NNC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	111.423323522472	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357675	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26406767_26407096_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.124	chr17	+	3739	11	NNC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	112.576196418248	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357677	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409195_26411499_26411598_26412912_26413081_26413908
ES.14629.125	chr17	+	2773	10	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_1	111.555444887063	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357678	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26362469_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.127	chr17	+	5072	10	NNC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	113.54435691682	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357678	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407723_26408965_26409206_26411489_26413081_26413908
ES.14629.128	chr17	+	6463	4	ISM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	-244	7778	18	-1279	intron_retention	FALSE	canonical	3	263	junction_1	44.3796750276019	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26357679	26406490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463
ES.14629.129	chr17	+	6501	5	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	19	-443	intron_retention	FALSE	non_canonical	0	0	junction_4	146.16151169169	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGTCTAGAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	26357680	26408762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26402901_26405133
ES.14629.13	chr17	+	3435	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	173.998782722434	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332265	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340627_26340911
ES.14629.130	chr17	+	2678	9	NIC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	31	-1	intron_retention	FALSE	canonical	2	25	junction_1	108.366277042261	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357692	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.131	chr17	+	1427	4	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	36	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	150.098486186755	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGATATGTGATATAC	NA	False	NA	8	True	AATAAA	-16	NA	26357697	26414782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392660_26414678
ES.14629.132	chr17	+	1790	5	NNC	ENSMUSG00000024182.18	novel	2890	10	NA	NA	53	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	146.16151169169	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGATATGTGATATAC	NA	False	NA	8	True	AATAAA	-16	NA	26357714	26414782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26414490
ES.14629.133	chr17	+	2552	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	113.762368748237	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26357926	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.135	chr17	+	5497	1	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	-3861	-443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGTCTAGAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	26403265	26408762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26403300_26408800
ES.14629.136	chr17	+	2859	13	NIC	ENSMUSG00000024186.16	novel	2005	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	2.42670329642684	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCCATTCTTCTGT	7068	False	NA	NA	False	AATAAA	-14	NA	26421925	26430289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26422016_26422269_26422367_26422435_26422487_26422551_26423358_26423460_26423520_26423824_26424164_26426266_26426297_26426369_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430_26429514_26429592
ES.14629.137	chr17	+	5134	9	NIC	ENSMUSG00000024186.16	novel	2703	15	NA	NA	10	1	intron_retention	FALSE	canonical	1	1	junction_1	2.08791163606126	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCATTCTTCTGTGGG	7106	False	NA	NA	False	AATAAA	-17	NA	26421963	26430292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26422016_26422269_26423358_26423460_26423520_26423824_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430_26429514_26429592
ES.14629.138	chr17	+	2541	13	NNC	ENSMUSG00000024186.16	novel	2086	17	NA	NA	454	-1	intron_retention	FALSE	canonical	0	0	junction_5	2.21578930005139	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACAGTCCATTCTTCTG	7582	False	NA	NA	False	AATAAA	-13	NA	26422439	26430288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26422487_26422551_26423358_26423460_26423520_26423824_26423902_26424081_26424149_26424680_26424750_26426266_26426297_26426369_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430_26429514_26429592
ES.14629.139	chr17	+	2484	12	NIC	ENSMUSG00000024186.16	novel	2703	15	NA	NA	591	-1	intron_retention	FALSE	canonical	0	0	junction_6	2.10076727423479	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACAGTCCATTCTTCTG	7719	False	NA	NA	False	AATAAA	-13	NA	26422576	26430288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26423358_26423460_26423520_26423824_26423902_26424081_26424164_26424680_26424750_26426266_26426297_26426369_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430_26429514_26429592
ES.14629.14	chr17	+	3025	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	117.492789376862	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332265	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337356_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.140	chr17	+	1314	4	NNC	ENSMUSG00000024186.16	novel	2703	15	NA	NA	-106	0	intron_retention	FALSE	canonical	0	0	junction_2	2.86744175568088	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCCATTCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	26426321	26430291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26426520_26426732_26426849_26427137_26427277_26429430
ES.14629.15	chr17	+	6461	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.739442791653	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332266	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333334_26333547_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.16	chr17	+	2998	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	152.017451483557	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332266	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.17	chr17	+	3747	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_10	121.536716895426	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332266	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513
ES.14629.18	chr17	+	3157	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.884307346084	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332266	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335790_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.19	chr17	+	3507	8	NNC	ENSMUSG00000024180.15	novel	2427	12	NA	NA	-6	0	intron_retention	FALSE	canonical	1	3	junction_4	148.319566738684	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332266	26341321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337340_26337404_26337835_26337927_26338006_26338510_26339257
ES.14629.2	chr17	+	2823	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-29	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	122.640238499334	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332243	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.20	chr17	+	3423	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	176.973220667234	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332267	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336597_26336792_26337083_26337404_26337835_26337927_26338006_26338131_26338357_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.21	chr17	+	4726	7	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	375	junction_1	29.1304537097062	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332267	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.22	chr17	+	3913	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-3	2	intron_retention	FALSE	canonical	3	294	junction_6	43.8630475702357	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332269	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.23	chr17	+	3455	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	114.032494150668	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332270	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.24	chr17	+	3764	12	ISM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-19	0	-2	0	intron_retention	FALSE	canonical	3	294	junction_7	43.4708984064565	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332270	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.25	chr17	+	3559	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	114.633716195929	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332271	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339177_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.26	chr17	+	3655	11	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	3	junction_4	160.864414958685	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATCAAATGAGTGGTCT	NA	False	NA	10	True	NA	NA	NA	26332271	26342218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337340_26337404_26337835_26337927_26338006_26338092_26338372_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.27	chr17	+	2442	14	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-1	105336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	142.085481396477	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAATGGGGGTCATTAG	NA	False	NA	NA	False	NA	NA	NA	26332271	26447564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060_26341313_26447539
ES.14629.28	chr17	+	3221	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	116.975662236021	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332272	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.29	chr17	+	3331	13	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	107.829694683587	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332273	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060
ES.14629.3	chr17	+	3611	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	116.864118625959	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332257	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336597_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.30	chr17	+	2303	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	121.487747231039	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332273	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.31	chr17	+	2852	12	ISM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-15	908	2	-1	intron_retention	FALSE	canonical	3	294	junction_7	43.4708984064565	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332274	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.32	chr17	+	3004	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	153.142544346399	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332278	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.33	chr17	+	3365	11	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_4	127.6	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332278	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337356_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.34	chr17	+	3173	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.195705743819	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAATGAGTGGTCTTT	NA	False	NA	12	True	NA	NA	NA	26332282	26342220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.35	chr17	+	2580	14	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	105336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	113.149218124255	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAATGGGGGTCATTAG	NA	False	NA	NA	False	NA	NA	NA	26332282	26447564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911_26341313_26447539
ES.14629.36	chr17	+	2577	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	115.934847603682	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332283	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338357_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.37	chr17	+	2909	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-6	561	-6	345	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTGTGTGCTGTCC	NA	False	NA	NA	False	NA	NA	NA	26332283	26341667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.38	chr17	+	3568	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	294	junction_6	43.2578278398429	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332287	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.39	chr17	+	2518	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	114.899472970457	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCTTGGCTTCTTTCTCC	NA	False	NA	10	True	AATAAA	-11	NA	26332287	26341319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.4	chr17	+	3511	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	113.330974240153	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332257	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339239_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.40	chr17	+	3680	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-2	2	intron_retention	FALSE	canonical	3	13	junction_4	119.090076332966	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332287	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.41	chr17	+	3452	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	149.620886650969	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAATGAGTGGTCTTT	NA	False	NA	12	True	NA	NA	NA	26332290	26342220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339239_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.42	chr17	+	2435	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	152.559528454378	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332290	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336483_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.43	chr17	+	3454	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	115.749250057566	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332290	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336195_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.44	chr17	+	6261	9	NNC	ENSMUSG00000024180.15	novel	2433	12	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	141.788574998129	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332290	26341321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333334_26333547_26335908_26335992_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.45	chr17	+	3370	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	113.471821024723	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332290	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26336082_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.46	chr17	+	7058	9	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_1	143.063742349346	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332290	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333339_26333554_26335908_26335992_26336201_26336384_26337404_26337835_26337927_26338006_26338510_26339257_26339660_26340513_26340631_26340911
ES.14629.47	chr17	+	4167	11	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	2	-3	intron_retention	FALSE	canonical	3	294	junction_6	45.5319667925733	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAATGAGTGGTCTTT	NA	False	NA	12	True	NA	NA	NA	26332291	26342220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.48	chr17	+	2106	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	115.94239470051	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCTTGGCTTCTTTCTCC	NA	False	NA	10	True	AATAAA	-11	NA	26332291	26341319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.49	chr17	+	2936	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	121.756429395632	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332291	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.5	chr17	+	3468	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	154.392064958735	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332257	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337090_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.50	chr17	+	3435	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	117.427519015869	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332293	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339534_26339660_26340513_26340631_26340911
ES.14629.51	chr17	+	3306	12	FSM	ENSMUSG00000024180.15	ENSMUST00000235821.2	2427	12	25	-904	8	2	multi-exon	FALSE	canonical	2	19	junction_10	116.537015720576	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332297	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26340513_26340631_26340911
ES.14629.52	chr17	+	3689	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	11	junction_8	119.039405934712	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGAGTGGTCTTTTTT	NA	False	NA	15	True	NA	NA	NA	26332301	26342223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.55	chr17	+	2480	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	152.67903879999	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGCTTGGCTTCTTTC	NA	False	NA	7	True	AATAAA	-8	NA	26332301	26341316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.56	chr17	+	3473	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	117.749823071346	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332301	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338348_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.57	chr17	+	2076	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	153.142544346399	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332301	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.58	chr17	+	3181	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	121.487747231039	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGGTCTTTTTTTTT	NA	False	NA	18	True	NA	NA	NA	26332301	26342226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.59	chr17	+	5522	13	NNC	ENSMUSG00000024180.15	novel	2433	12	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.739442791653	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26332301	26341321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333334_26333547_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.6	chr17	+	3241	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	160.223861988198	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATCAAATGAGTGGTCT	NA	False	NA	10	True	NA	NA	NA	26332257	26342218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338348_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.60	chr17	+	2784	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	2	intron_retention	FALSE	canonical	3	294	junction_7	42.2620709931269	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGCTTGGCTTCTTTCTC	NA	False	NA	9	True	AATAAA	-10	NA	26332301	26341318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.61	chr17	+	4126	11	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	294	junction_6	44.3203113707474	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332301	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337927_26338006_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.62	chr17	+	4186	10	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	294	junction_4	47.8100666087781	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332301	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.63	chr17	+	3684	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	294	junction_7	42.2620709931269	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATGAGTGGTCTTTTT	NA	False	NA	14	True	NA	NA	NA	26332305	26342222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.65	chr17	+	6420	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.739442791653	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332305	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333339_26333554_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.66	chr17	+	3156	12	NNC	ENSMUSG00000024180.15	novel	2235	12	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	151.149151885489	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGAGTGGTCTTTTTTT	NA	False	NA	16	True	NA	NA	NA	26332307	26342224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26340503_26340631_26341060
ES.14629.67	chr17	+	2934	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	122.451542110703	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332309	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.68	chr17	+	2529	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	115.749250057566	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332310	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336195_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.69	chr17	+	3385	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	116.888717258007	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATGAGTGGTCTTTTT	NA	False	NA	14	True	NA	NA	NA	26332317	26342222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340558_26340631_26340911
ES.14629.7	chr17	+	2589	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	-31	906	-14	0	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTCTTTCTCCAGA	NA	False	NA	13	True	AATAAA	-14	NA	26332258	26341322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.70	chr17	+	3158	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.56298768557	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332319	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337090_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.71	chr17	+	3443	11	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	6	0	intron_retention	FALSE	canonical	1	4	junction_4	126.199088744729	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332322	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.72	chr17	+	3288	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	121.620463697861	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332325	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26340503_26340631_26340911
ES.14629.73	chr17	+	3385	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	114.899472970457	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332326	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.74	chr17	+	3623	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	11	2	intron_retention	FALSE	canonical	3	294	junction_6	43.8931836422005	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332327	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.75	chr17	+	4341	9	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	11	2	intron_retention	FALSE	canonical	3	294	junction_3	49.87484335815	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332327	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26332542_26335732_26335908_26335992_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.76	chr17	+	3168	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	116.813241258572	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332327	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341166
ES.14629.77	chr17	+	2509	14	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	11	105336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	146.428567717461	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAATGGGGGTCATTAG	NA	False	NA	NA	False	NA	NA	NA	26332327	26447564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911_26341310_26447537
ES.14629.79	chr17	+	3782	12	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_10	159.074804379668	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332329	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336597_26336982_26337083_26337404_26337835_26337927_26338006_26338510_26339257_26339437_26339512_26339664_26340513_26340631_26340911
ES.14629.8	chr17	+	3432	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	152.67903879999	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332261	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338092_26338372_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.80	chr17	+	3904	11	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	13	-1	intron_retention	FALSE	canonical	1	2	junction_3	122.86268758252	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGTCTTTTTTTTTT	NA	False	NA	19	True	NA	NA	NA	26332329	26342227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26336201_26336384_26336513_26336597_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513
ES.14629.81	chr17	+	3432	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	115.934847603682	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26332333	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338357_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.83	chr17	+	2599	14	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	182.762496638437	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGACGCTTGGCTTCTTT	NA	False	NA	6	True	AATAAA	-7	NA	26332358	26341315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337629_26337763_26337835_26337927_26338006_26338131_26338372_26338515_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.84	chr17	+	2375	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	129	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	114.032494150668	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTGGCTTCTTTCTCCA	NA	False	NA	11	True	AATAAA	-12	NA	26332445	26341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.85	chr17	+	6296	12	FSM	ENSMUSG00000024180.15	ENSMUST00000128597.3	2433	12	-2956	-907	332	0	multi-exon	FALSE	canonical	3	294	junction_6	43.3616351739493	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332648	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.86	chr17	+	3284	13	NNC	ENSMUSG00000024180.15	novel	2433	12	NA	NA	432	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.739442791653	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332748	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26332821_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.87	chr17	+	4818	10	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	-853	0	intron_retention	FALSE	canonical	0	0	junction_3	134.676108946567	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26334751	26342228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26335908_26335992_26336201_26336384_26336982_26337090_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.88	chr17	+	2870	12	NNC	ENSMUSG00000024180.15	novel	2433	12	NA	NA	272	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	121.335066436325	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAATGAGTGGTCTTT	NA	False	NA	12	True	NA	NA	NA	26335876	26342220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ES.14629.89	chr17	+	3310	6	NNC	ENSMUSG00000024180.15	novel	1707	7	NA	NA	53	2	intron_retention	FALSE	non_canonical	0	0	junction_3	167.059270919036	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGTGGTCTTTTTTTT	NA	False	NA	17	True	NA	NA	NA	26336855	26342225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26337927_26338006_26338510_26339257_26339437_26339533_26339660_26340513_26340631_26340911
ES.14629.9	chr17	+	7904	5	NNC	ENSMUSG00000024180.15	novel	2433	12	NA	NA	-7	2	intron_retention	FALSE	non_canonical	0	0	junction_1	188.187904765423	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGCTTGGCTTCTTTCTC	NA	False	NA	9	True	AATAAA	-10	NA	26332265	26341318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26333334_26333547_26335908_26335992_26336982_26337083_26338510_26339257
ES.14629.90	chr17	+	1067	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342474	26345587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ES.14629.91	chr17	+	1054	5	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	597.959603568669	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342495	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26345244
ES.14629.92	chr17	+	4627	16	Fusion	ENSMUSG00000024181.10_ENSMUSG00000024182.18	novel	2129	6	NA	NA	4	-1	multi-exon	FALSE	canonical	0	0	junction_2	493.323108002138	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26342497	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244_26345600_26356179_26356329_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ES.14629.93	chr17	+	1149	6	NNC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	624.780473446474	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAAGTCTGGAGTCCT	NA	False	NA	13	True	AGTAAA	-13	NA	26342498	26345579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26342824_26343529_26343693_26343930_26344035_26344230_26344366_26344451_26344539_26345244
ES.14629.94	chr17	+	1016	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	-19	5	5	-5	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTCTGGAGTCCTGTG	NA	False	NA	16	True	AGTAAA	-16	NA	26342498	26345582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
ES.14629.95	chr17	+	4707	13	Fusion	ENSMUSG00000024181.10_ENSMUSG00000024182.18	novel	2129	6	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_4	465.152864658491	742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATATGTGATATACTA	NA	False	NA	10	True	AATAAA	-18	NA	26342499	26414784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_26342824_26343529_26344366_26344451_26344539_26356179_26356329_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406680_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ES.14629.96	chr17	+	1124	4	FSM	ENSMUSG00000024181.10	ENSMUST00000236040.2	1134	4	8	2	8	-2	multi-exon	FALSE	canonical	0	0	junction_2	672.139039848817	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342501	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26342824_26343529_26343683_26344230_26344539_26345244
ES.14629.98	chr17	+	1739	4	NIC	ENSMUSG00000024181.10	novel	1068	5	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_1	660.694752178005	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	False	NA	19	True	AGTAAA	-19	NA	26342506	26345585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26343683_26344230_26344366_26344451_26344539_26345244
ES.1463.1	chr1	-	865	2	NNC	ENSMUSG00000097403.3	novel	2097	3	NA	NA	288	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTTTATAGGTAT	3165	False	NA	NA	False	NA	NA	NA	136342944	136340581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136341416_136342913
ES.1463.2	chr1	-	2693	1	FSM	ENSMUSG00000097403.3	ENSMUST00000194227.2	2652	1	-48	7	-23	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTATGTTTTGTTTAT	2829	False	NA	NA	False	NA	NA	NA	136343280	136340587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136340600_136343300
ES.14630.1	chr17	-	2395	1	Antisense	novelGene_ENSMUSG00000024180.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	26335954	26333559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_26333600_26336000
ES.14631.1	chr17	-	2145	1	Intergenic	novelGene_12248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26354678	26352533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26352500_26354700
ES.14632.1	chr17	-	4043	1	Intergenic	novelGene_12249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTAAGCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	26382665	26378622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26378600_26382700
ES.14633.1	chr17	-	182	1	Intergenic	novelGene_12250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26383697	26383515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26383500_26383700
ES.14634.1	chr17	-	177	1	Intergenic	novelGene_12251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGGGGGGCA	NA	False	NA	NA	False	NA	NA	NA	26389631	26389454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26389500_26389600
ES.14635.1	chr17	-	1141	7	NNC	ENSMUSG00000073433.12	novel	1032	6	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_5	42.871902220452	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26426813	26418156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26425658_26425758_26426523
ES.14635.2	chr17	-	824	6	NNC	ENSMUSG00000073433.12	novel	1032	6	NA	NA	1321	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.0156723564492	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26425439	26418156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26425367
ES.14635.3	chr17	-	1110	5	NIC	ENSMUSG00000073433.12	novel	1032	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	81	junction_1	7.43303437365925	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420319	26418156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
ES.14635.4	chr17	-	1239	4	FSM	ENSMUSG00000073433.12	ENSMUST00000155556.2	796	4	-135	-308	71	0	multi-exon	FALSE	canonical	3	81	junction_2	4.32049379893857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420253	26418156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26418504_26418586_26418651_26418725_26419345_26420044
ES.14635.5	chr17	-	901	6	FSM	ENSMUSG00000073433.12	ENSMUST00000121959.3	1029	6	132	-4	-93	0	multi-exon	TRUE	canonical	3	7	junction_2	34.8906864363543	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420211	26418156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26418504_26418586_26418651_26418743_26418803_26418988_26419073_26419164_26419345_26420044
ES.14635.6	chr17	-	1174	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	-144	2	-125	2	multi-exon	FALSE	canonical	3	81	junction_2	6.72309452558864	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTGTGCTGCTTCT	NA	False	NA	-6	True	ATTAAA	-15	NA	26420468	26418158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
ES.14636.1	chr17	-	3672	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	54	-893	8	5	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGAATCACTTTTTTT	1982	False	NA	NA	False	NA	NA	NA	26463134	26430790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.10	chr17	-	2859	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	-23	878	-4	-9	multi-exon	FALSE	canonical	3	154	junction_12	26.8089951736767	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1896	False	NA	-7	True	AATAAA	-41	NA	26463220	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
ES.14636.11	chr17	-	2801	13	NNC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.4860002065197	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1948	False	NA	-7	True	AATAAA	-41	NA	26463168	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437614_26437726_26439254_26439555_26444885_26444998_26462979
ES.14636.12	chr17	-	2860	13	NNC	ENSMUSG00000024187.16	novel	2828	13	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.4879903019671	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1965	False	NA	-7	True	AATAAA	-41	NA	26463151	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433806_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ES.14636.13	chr17	-	2779	13	NIC	ENSMUSG00000024187.16	novel	2774	13	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	63.7958440826847	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCAGTCTGTCTGG	1974	False	NA	-9	True	AATAAA	-39	NA	26463142	26431675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
ES.14636.14	chr17	-	2673	13	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	77	8	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	64.7081052797012	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCAGTCTGTCTGG	2078	False	NA	-9	True	AATAAA	-39	NA	26463038	26431675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.16	chr17	-	2938	14	NNC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.2904367246362	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCAGTCTGTCTGG	1933	False	NA	-9	True	AATAAA	-39	NA	26463183	26431675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26437828_26437931_26439254_26439555_26444885_26444998_26462963
ES.14636.18	chr17	-	2730	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	23	-4	3	4	multi-exon	FALSE	canonical	3	10	junction_11	62.3582027847616	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGAGCCTGCAGTCTGT	1923	False	NA	-13	True	AATAAA	-35	NA	26463193	26431679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
ES.14636.2	chr17	-	2731	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	-82	-20	0	-2	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTGGATGTCTTTC	1919	False	NA	0	True	NA	NA	NA	26463197	26431666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ES.14636.20	chr17	-	2809	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234554.2	2828	13	-1	20	0	-1	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	1919	False	NA	-18	True	AATAAA	-30	NA	26463197	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ES.14636.21	chr17	-	2745	12	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	85.9402060054807	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	1921	False	NA	-18	True	AATAAA	-30	NA	26463195	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.22	chr17	-	2772	13	NNC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	61.2392847770122	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	2004	False	NA	-18	True	AATAAA	-30	NA	26463112	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26445014_26462963
ES.14636.23	chr17	-	2767	13	NNC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.3823444560806	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	1967	False	NA	-18	True	AATAAA	-30	NA	26463149	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435640_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.24	chr17	-	2728	13	NNC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	64.5327221045434	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	1986	False	NA	-18	True	AATAAA	-30	NA	26463130	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434188_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
ES.14636.25	chr17	-	2841	13	NNC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	89.4664353573761	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	1901	False	NA	-18	True	AATAAA	-30	NA	26463215	26431684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26445014_26462963
ES.14636.26	chr17	-	2772	13	NNC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_12	60.9787645186603	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCAGCGTGAGCCTGCA	1959	False	NA	-19	True	AATAAA	-29	NA	26463157	26431685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462991
ES.14636.27	chr17	-	2687	12	NNC	ENSMUSG00000024187.16	novel	2629	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_7	79.0420956994562	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	1921	False	NA	-20	True	AATAAA	-28	NA	26463195	26431686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435644_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ES.14636.28	chr17	-	3049	12	NNC	ENSMUSG00000024187.16	novel	2696	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.6797336041015	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	1969	False	NA	-20	True	AATAAA	-28	NA	26463147	26431686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26438132_26439254_26439555_26462979
ES.14636.29	chr17	-	2789	13	NNC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	63.799762712899	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCCAGCGTGAGCCTG	1921	False	NA	-21	True	AATAAA	-27	NA	26463195	26431687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439524_26444885_26444998_26462979
ES.14636.3	chr17	-	2874	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	-26	-15	2	-4	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTGTCTGGATGTCTT	1902	False	NA	-2	True	NA	NA	NA	26463214	26431668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.30	chr17	-	2854	12	NIC	ENSMUSG00000024187.16	novel	2828	13	NA	NA	11	-1	intron_retention	FALSE	canonical	3	24	junction_1	76.8293160300994	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCCAGCGTGAGCCTG	1939	False	NA	-21	True	AATAAA	-27	NA	26463177	26431687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ES.14636.31	chr17	-	178	1	Intergenic	novelGene_12252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTATGTGTTAAG	NA	False	NA	NA	False	NA	NA	NA	26452716	26452538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26452500_26452700
ES.14636.32	chr17	-	2308	1	Genic_Genomic	ENSMUSG00000024187.16	novel	NA	NA	NA	NA	-41	-23697	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCCAAAAACCAAAAA	1859	False	NA	NA	False	NA	NA	NA	26463257	26460949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_26460900_26463300
ES.14636.4	chr17	-	3172	11	NIC	ENSMUSG00000024187.16	novel	2749	12	NA	NA	17	-8	intron_retention	FALSE	canonical	3	10	junction_10	65.3808075814302	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTCTGTCTGGATG	1945	False	NA	-6	True	AATAAA	-42	NA	26463171	26431672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
ES.14636.5	chr17	-	2572	12	NNC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.3475840280576	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	2027	False	NA	-7	True	AATAAA	-41	NA	26463089	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437254_26439254_26439555_26444885_26444998_26462979
ES.14636.6	chr17	-	2800	12	NIC	ENSMUSG00000024187.16	novel	2833	13	NA	NA	120	-9	intron_retention	FALSE	canonical	3	24	junction_2	67.3771916186273	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	2121	False	NA	-7	True	AATAAA	-41	NA	26462995	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433319_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ES.14636.7	chr17	-	2816	13	NIC	ENSMUSG00000024187.16	novel	2828	13	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	79.1455673637718	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1921	False	NA	-7	True	AATAAA	-41	NA	26463195	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462963
ES.14636.8	chr17	-	882	2	NNC	ENSMUSG00000024187.16	novel	2696	12	NA	NA	-4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1970	False	NA	-7	True	AATAAA	-41	NA	26463146	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26432409_26462999
ES.14636.9	chr17	-	2816	13	NIC	ENSMUSG00000024187.16	novel	3714	13	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	58.4886028783956	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGTCTGTCTGGAT	1921	False	NA	-7	True	AATAAA	-41	NA	26463195	26431673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
ES.14637.1	chr17	+	177	1	Intergenic	novelGene_12253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	26465676	26465853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26465700_26465900
ES.14638.1	chr17	-	163	1	Intergenic	novelGene_12254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACTAGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	26471619	26471456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26471500_26471600
ES.14639.1	chr17	+	3634	8	NIC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	10	1	intron_retention	FALSE	canonical	3	531	junction_1	36.4159642049966	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTACATTAGTGTATTA	NA	False	NA	18	True	ATTAAA	-30	NA	26471879	26499698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.10	chr17	+	1410	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	26	-88	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGTTTCTAGAGTT	NA	False	NA	5	True	NA	NA	NA	26471895	26500854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.11	chr17	+	1553	9	NNC	ENSMUSG00000024188.17	novel	1700	9	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	197.979757487982	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATTATATGTTTACA	NA	False	NA	7	True	ATTAAA	-19	NA	26471896	26499687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494711_26496519_26496609_26498306_26498337_26498934
ES.14639.12	chr17	+	1623	10	NNC	ENSMUSG00000024188.17	novel	1672	10	NA	NA	27	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	241.505003398825	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTATTATATGTTTAC	NA	False	NA	6	True	ATTAAA	-18	NA	26471896	26499686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494711_26496519_26496609_26498306_26498337_26498934
ES.14639.14	chr17	+	3364	9	NIC	ENSMUSG00000024188.17	novel	2704	10	NA	NA	-26	1	intron_retention	FALSE	canonical	3	213	junction_8	130.481559999871	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTGTTGGGGTATCTG	NA	False	NA	11	True	AATAAA	-20	NA	26471898	26500943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.15	chr17	+	2709	9	NNC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	-23	-10	intron_retention	FALSE	non_canonical	0	0	junction_6	225.611391556366	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTTATTATATGTT	NA	False	NA	3	True	ATTAAA	-15	NA	26471901	26499683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494819_26496519_26496609_26498306_26498337_26498934
ES.14639.16	chr17	+	2396	9	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-22	1120	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	197.222589984008	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTTTTGCTTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	26471902	26502086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26500598
ES.14639.17	chr17	+	4572	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-21	383	-21	-383	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGTGATGTAATC	NA	False	NA	NA	False	NA	NA	NA	26471903	26504095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.18	chr17	+	1434	8	NNC	ENSMUSG00000024188.17	novel	1700	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	203.715287515068	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	13	True	ATTAAA	-25	NA	26471910	26499693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496570_26499090
ES.14639.2	chr17	+	1758	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	-90	4	13	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	13	True	ATTAAA	-25	NA	26471882	26499693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.20	chr17	+	2471	10	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-14	2	intron_retention	FALSE	canonical	3	162	junction_1	172.384010028715	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGGGGTATCTGC	NA	False	NA	12	True	AATAAA	-21	NA	26471910	26500944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.21	chr17	+	3590	8	NNC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	-12	21	intron_retention	FALSE	canonical	1	1	junction_2	211.851314822063	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTGTGTTACTGTGT	NA	False	NA	38	True	NA	NA	NA	26471912	26499718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26474100_26476899_26476999_26485287_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.22	chr17	+	1649	8	NNC	ENSMUSG00000024188.17	novel	1700	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	203.715287515068	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	13	True	ATTAAA	-25	NA	26471918	26499693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496611_26498908
ES.14639.24	chr17	+	1599	9	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.401673659088	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTTATTATATGTT	NA	False	NA	3	True	ATTAAA	-15	NA	26471924	26499683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26474004_26474100_26476899_26476963_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.26	chr17	+	6430	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	57	-4787	2	2	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCAGGTGTTTTGTCA	NA	False	NA	19	True	NA	NA	NA	26471926	26504480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.27	chr17	+	5991	10	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	1	6	intron_retention	FALSE	canonical	3	162	junction_1	172.384010028715	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGTGTTTTGTCACTCG	NA	False	NA	23	True	NA	NA	NA	26471930	26504484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.28	chr17	+	4062	12	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	235.931528097483	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	17	True	NA	NA	NA	26471943	26504478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598_26502981_26503904
ES.14639.29	chr17	+	1663	10	NNC	ENSMUSG00000024188.17	novel	1672	10	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	273.015262088648	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATTATATGTTTACA	NA	False	NA	7	True	ATTAAA	-19	NA	26471944	26499687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485287_26485368_26486188_26486337_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.3	chr17	+	1708	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	13	-21	13	17	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCATGTGTGTTACT	NA	False	NA	34	True	NA	NA	NA	26471882	26499714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.30	chr17	+	4946	11	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	242.572236663638	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTTGTCAGGTGTTT	NA	False	NA	14	True	NA	NA	NA	26471944	26504475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476963_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.32	chr17	+	2641	9	NNC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	5	-10	intron_retention	FALSE	canonical	1	1	junction_3	229.641024209526	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTTATTATATGTT	NA	False	NA	3	True	ATTAAA	-15	NA	26471944	26499683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485287_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.34	chr17	+	4857	10	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	206.536039960267	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCAGGTGTTTTGTCA	NA	False	NA	19	True	NA	NA	NA	26471950	26504480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494772_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.35	chr17	+	2513	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	27	2394	-6	1118	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACAGCTGTTTTGCTTT	NA	False	NA	NA	False	TATAAA	-12	NA	26471951	26502084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.36	chr17	+	6701	9	ISM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	179	-7	-92	7	3prime_fragment	FALSE	canonical	3	213	junction_8	130.481559999871	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGTTTTGTCACTCGT	NA	False	NA	24	True	NA	NA	NA	26472103	26504485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.37	chr17	+	6032	8	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	1166	-2	intron_retention	FALSE	canonical	3	213	junction_7	134.017970162701	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTTGTCAGGTGTTTT	NA	False	NA	15	True	NA	NA	NA	26473361	26504476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26499103_26500598
ES.14639.38	chr17	+	869	3	ISM	ENSMUSG00000024188.17	ENSMUST00000152107.3	715	5	10270	1259	10270	-10	internal_fragment	FALSE	canonical	3	623	junction_1	9.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTTATTATATGTT	NA	False	NA	3	True	ATTAAA	-15	NA	26496518	26499683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26496609_26498306_26498337_26498934
ES.14639.39	chr17	+	9576	1	Genic_Genomic	ENSMUSG00000024188.17	novel	NA	NA	NA	NA	13783	5129	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGTTTCAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	26500031	26509607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_26500000_26509600
ES.14639.4	chr17	+	4202	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-42	774	13	-774	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACTGTTGTTAGGTGT	NA	False	NA	NA	False	AATGAA	-11	NA	26471882	26503704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.40	chr17	+	2526	2	NNC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	14836	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	17	True	NA	NA	NA	26501084	26504478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26503139_26504006
ES.14639.5	chr17	+	5090	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	16	46	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTTACTGCCCAGAA	NA	False	NA	63	True	NA	NA	NA	26471885	26504524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.6	chr17	+	1435	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-35	3534	20	2	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGGGGTATCTGC	NA	False	NA	12	True	AATAAA	-21	NA	26471889	26500944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.7	chr17	+	2740	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	-68	-2	20	-1	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTTACATTAGTGTAT	NA	False	NA	16	True	ATTAAA	-28	NA	26471889	26499696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ES.14639.8	chr17	+	4972	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	-31	-7	24	7	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGTTTTGTCACTCGT	NA	False	NA	24	True	NA	NA	NA	26471893	26504485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.14639.9	chr17	+	4379	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	26	-655	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATTATAGCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	26471895	26503823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ES.1464.1	chr1	-	174	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAAAGTATATCTGC	NA	False	NA	NA	False	NA	NA	NA	136369964	136369790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136369800_136370000
ES.14640.1	chr17	-	248	1	Intergenic	novelGene_12255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-5	NA	26480055	26479807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26479800_26480100
ES.14641.1	chr17	-	6190	1	Genic_Genomic	ENSMUSG00000084893.4	novel	NA	NA	NA	NA	-76	5415	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTAATAAGGGCTAGAGA	8651	False	NA	NA	False	AAAAAG	-5	NA	26506111	26499921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_26499900_26506100
ES.14642.1	chr17	-	1687	1	Intergenic	novelGene_12256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	26587658	26585971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26586000_26587700
ES.14643.1	chr17	+	6595	1	Intergenic	novelGene_12257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26639026	26645621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26639000_26645600
ES.14644.1	chr17	+	4069	2	NNC	ENSMUSG00000034413.15	novel	6195	5	NA	NA	27253	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCATCAGAATTCAGTTT	5254	False	NA	NA	False	AATACA	-25	NA	26661191	26665323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26663356_26663418
ES.14645.1	chr17	-	157	1	Intergenic	novelGene_12258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAAAATAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	26686400	26686243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26686200_26686400
ES.14646.1	chr17	-	206	1	Genic_Genomic	ENSMUSG00000118107.2	novel	NA	NA	NA	NA	23191	47	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACTGTTTTCCCACCA	NA	False	NA	NA	False	AAAAAG	-21	NA	26686692	26686486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_26686500_26686700
ES.14647.1	chr17	-	1988	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	2	0	2	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCGTGCTTTCTTTGGT	NA	False	NA	0	True	AATAAA	-20	NA	26727491	26724563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ES.14647.10	chr17	-	2309	3	FSM	ENSMUSG00000024190.8	ENSMUST00000126178.2	2313	3	2	2	0	-2	multi-exon	FALSE	canonical	3	485	junction_2	17.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCGTGCTTTCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	26727446	26724566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_26725625_26725958_26726694_26726930
ES.14647.3	chr17	-	2278	3	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	466	junction_1	9.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCGTGCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	26727449	26724565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26726179_26726547_26726694_26726930
ES.14647.4	chr17	-	2885	1	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	-2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCGTGCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	26727450	26724565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26724600_26727400
ES.14647.5	chr17	-	2548	2	ISM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	-1	1	-1	-1	intron_retention	FALSE	canonical	3	520	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCGTGCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	26727447	26724565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_26725625_26725958
ES.14647.9	chr17	-	2127	2	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	2	-1	intron_retention	FALSE	canonical	1	9	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCGTGCTTTCTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	26727444	26724565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_26726179_26726930
ES.14648.1	chr17	+	2774	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	-17	-3	-17	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTGACTCTGCCTT	NA	False	NA	14	True	ATTAAA	-18	NA	26780445	26875908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14648.10	chr17	+	4304	9	ISM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	56	11756	0	1293	5prime_fragment	FALSE	canonical	3	417	junction_5	27.7801075411885	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCAGTGTGCACGTGCC	NA	False	NA	NA	False	AAAAAG	-14	NA	26780518	26864149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555
ES.14648.11	chr17	+	2828	11	NNC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	174.561994718209	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	NA	False	NA	11	True	ATTAAA	-15	NA	26780527	26875905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26780607_26787638_26787778_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14648.12	chr17	+	2629	9	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	145.142979075806	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTGACTCTGCCTT	NA	False	NA	14	True	ATTAAA	-18	NA	26780528	26875908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26780607_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14648.13	chr17	+	1323	3	Intergenic	novelGene_12259	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGGAGGAAGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	26804182	26806114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_26804602_26804820_26805411_26805800
ES.14648.14	chr17	+	1990	2	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	20131	-1757	5557	0	3prime_fragment	FALSE	canonical	3	380	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	9877	False	NA	11	True	ATTAAA	-15	NA	26860553	26875905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26860679_26874040
ES.14648.15	chr17	+	2058	1	Genic_Genomic	ENSMUSG00000001576.16	novel	NA	NA	NA	NA	20718	1864	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTTAAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	26875714	26877772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_26875700_26877800
ES.14648.2	chr17	+	2527	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	-12	239	-12	-239	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTTTGGTGTGTGAAT	NA	False	NA	NA	False	AAGAAA	-3	NA	26780450	26875666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14648.3	chr17	+	1186	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	-10	1578	-10	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTGTCTCTTTCCCTGC	NA	False	NA	15	True	GATAAA	-17	NA	26780452	26874327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14648.4	chr17	+	2637	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	3	-241	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCCTTTGGTGTGTGA	NA	False	NA	NA	False	AAGAAA	-1	NA	26780465	26875664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
ES.14648.5	chr17	+	1288	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	14	True	GATAAA	-16	NA	26780476	26874326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
ES.14648.6	chr17	+	532	6	ISM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	21	22461	-8	-4309	5prime_fragment	FALSE	canonical	3	417	junction_5	29.0626908595883	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACATGACACATACCAT	NA	False	NA	NA	False	NA	NA	NA	26780483	26853444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390
ES.14648.7	chr17	+	2855	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	NA	False	NA	11	True	ATTAAA	-15	NA	26780488	26875905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
ES.14648.8	chr17	+	2403	9	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	13	-247	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	145.142979075806	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACCAGTCCCTTTGGT	NA	False	NA	NA	False	TTTAAA	-19	NA	26780504	26875658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26780607_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ES.14649.1	chr17	-	211	1	Intergenic	novelGene_12260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCGTGAACTCCAATTC	NA	False	NA	NA	False	NA	NA	NA	26804821	26804610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26804600_26804800
ES.1465.1	chr1	+	243	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATTTTATTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	136376021	136376264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136376000_136376300
ES.14650.1	chr17	-	7682	3	NNC	ENSMUSG00000091078.2	novel	410	2	NA	NA	2005	5039	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCAGTGTCAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	26842069	26834292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26835050_26835104_26836193_26836232
ES.14650.2	chr17	-	2403	3	Antisense	novelGene_ENSMUSG00000001576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCAGTGTCAGAGTGA	4792	False	NA	NA	False	NA	NA	NA	26836791	26834292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_26835050_26835104_26836153_26836193
ES.14650.3	chr17	-	1945	3	Intergenic	novelGene_12261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	26842068	26834336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26835050_26835104_26835893_26841624
ES.14651.1	chr17	+	797	4	FSM	ENSMUSG00000015575.16	ENSMUST00000236346.2	494	4	-25	-278	-25	-3	multi-exon	FALSE	canonical	0	0	junction_1	633.395786394433	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTCCAGTGTTTA	NA	False	NA	34	True	AATAAA	-22	NA	26882179	26918618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26882366_26901651_26901700_26914328_26914459_26918185
ES.14651.10	chr17	+	612	3	ISM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	6307	3	6265	-3	3prime_fragment	FALSE	canonical	3	1134	junction_2	175	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTCCAGTGTTTA	NA	False	NA	34	True	AATAAA	-22	NA	26901650	26918618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26901700_26914328_26914459_26918185
ES.14651.11	chr17	+	6062	2	ISM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	13481	8	13439	-8	3prime_fragment	FALSE	canonical	3	1134	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAAATCTGGCTCCAGT	NA	False	NA	29	True	AATAAA	-17	NA	26908824	26918613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_26914459_26918185
ES.14651.2	chr17	+	3584	1	NIC	ENSMUSG00000015575.16	novel	494	4	NA	NA	5	-28659	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTAAAAGCAAGAAGTATT	NA	False	NA	NA	False	NA	NA	NA	26882209	26885793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26882200_26885800
ES.14651.3	chr17	+	802	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	18	3	18	-3	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTCCAGTGTTTA	NA	False	NA	34	True	AATAAA	-22	NA	26895361	26918618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ES.14651.4	chr17	+	762	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTCCAGTGTTTAA	NA	False	NA	35	True	AATAAA	-23	NA	26895386	26918619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
ES.14651.5	chr17	+	638	3	NIC	ENSMUSG00000015575.16	novel	823	4	NA	NA	4	-9	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	758.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGAAATCTGGCTCCAG	NA	False	NA	28	True	AATAAA	-16	NA	26895389	26918612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26895553_26901651_26901700_26918185
ES.14651.6	chr17	+	4499	3	FSM	ENSMUSG00000015575.16	ENSMUST00000167352.2	2812	3	4	-1691	4	-5	multi-exon	FALSE	canonical	3	1484	junction_2	17.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATCTGGCTCCAGTGTT	NA	False	NA	32	True	AATAAA	-20	NA	26895389	26918616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26895553_26901651_26901700_26914328
ES.14651.7	chr17	+	2979	7	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	8	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	561.293669422107	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGCTCCAGTGTTTA	NA	False	NA	34	True	AATAAA	-22	NA	26895393	26918618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26895553_26901651_26901700_26913452_26913556_26914328_26914459_26914664_26916587_26916708_26916893_26918185
ES.14651.8	chr17	+	888	6	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	447.146329516412	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCTGGCTCCAGTGTTT	NA	False	NA	33	True	AATAAA	-21	NA	26895420	26918617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26895553_26898193_26898237_26901651_26901700_26913452_26913556_26914328_26914459_26918185
ES.14651.9	chr17	+	4576	4	FSM	ENSMUSG00000015575.16	ENSMUST00000236299.2	442	4	35	-4169	35	0	multi-exon	FALSE	canonical	3	20	junction_3	700.129035726034	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895420	26918621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26895553_26901651_26901700_26913452_26913556_26914328
ES.14652.1	chr17	+	6003	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	-29	1488	-29	-1488	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAATGGATGTGCTT	1251	False	NA	NA	False	AATAAA	-23	NA	26934594	26994121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.10	chr17	+	6040	6	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5114766032436	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	1284	False	NA	NA	False	AATAAA	-17	NA	26934627	26995602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.11	chr17	+	5835	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	5	-1491	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	12.6491106406735	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCAAGAATGGATGTG	1290	False	NA	NA	False	AATAAA	-20	NA	26934633	26994118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955762_26955958_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.12	chr17	+	7278	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	24	-29	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	12.6491106406735	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGATGAAAAGAA	1309	False	NA	NA	False	NA	NA	NA	26934652	26995580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955762_26955958_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.13	chr17	+	7231	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	24	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	12.0914879825708	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	1309	False	NA	NA	False	AATAAA	-17	NA	26934652	26995602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.14	chr17	+	4533	6	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	25	-1488	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5114766032436	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAATGGATGTGCTT	1310	False	NA	NA	False	AATAAA	-23	NA	26934653	26994121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.15	chr17	+	7000	5	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-24	-29	intron_retention	FALSE	canonical	2	4	junction_1	13.9888348335378	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGATGAAAAGAA	1316	False	NA	NA	False	NA	NA	NA	26934659	26995580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26982423_26990265
ES.14652.16	chr17	+	3890	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-22	-3339	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	12.0914879825708	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGACTTGCCTCTTT	1318	False	NA	NA	False	AAAACA	-18	NA	26934661	26992270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.17	chr17	+	5210	3	NNC	ENSMUSG00000048249.15	novel	497	4	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCCTCATATTTTGT	1318	False	NA	NA	False	AATAAA	-26	NA	26934661	26995611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26934749_26976778_26976852_26990561
ES.14652.18	chr17	+	6318	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-13	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.0462286363781	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	1327	False	NA	NA	False	AATAAA	-17	NA	26934670	26995602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955762_26955958_26958516_26958643_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.2	chr17	+	6030	9	NNC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-7	-1488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.9833240637717	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAATGGATGTGCTT	1273	False	NA	NA	False	AATAAA	-23	NA	26934616	26994121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26934803_26955762_26955958_26958516_26958643_26961020_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.20	chr17	+	4822	10	NNC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-6024	-1488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.3380698461676	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAATGGATGTGCTT	3064	False	NA	NA	False	AATAAA	-23	NA	26955933	26994121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26955958_26958516_26958643_26961015_26961844_26961984_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265_26991550_26992264
ES.14652.21	chr17	+	6600	1	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	12327	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	26989002	26995602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26989000_26995600
ES.14652.3	chr17	+	5959	9	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-6	-1482	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	11.0841948286738	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGATGTGCTTTTCTTT	1274	False	NA	NA	False	AATAAA	-29	NA	26934617	26994127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955789_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.4	chr17	+	7470	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	-6	-2	-6	2	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCCTCATATTTTGT	1274	False	NA	NA	False	AATAAA	-26	NA	26934617	26995611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.5	chr17	+	7381	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	11.8889418694647	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAATTGTTTGCCTC	1280	False	NA	NA	False	AATAAA	-17	NA	26934623	26995602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26982299_26982423_26990265
ES.14652.6	chr17	+	3388	6	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	1	-2662	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	13.5114766032436	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGTGCAAGTTAAATC	1281	False	NA	NA	False	AATAAA	-16	NA	26934624	26992947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.7	chr17	+	7272	10	NNC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.7987235132963	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGATGAAAAGAA	1281	False	NA	NA	False	NA	NA	NA	26934624	26995580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265_26990402_26990561
ES.14652.8	chr17	+	1963	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	1	-4408	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.0462286363781	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAGATGGCTCTAGA	1281	False	NA	NA	False	NA	NA	NA	26934624	26991201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955762_26955958_26958516_26958643_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14652.9	chr17	+	5818	8	NIC	ENSMUSG00000048249.15	novel	7462	9	NA	NA	-2	-1488	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	14.7910618349083	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAATGGATGTGCTT	1283	False	NA	NA	False	AATAAA	-23	NA	26934626	26994121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_26934749_26955789_26955958_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ES.14653.1	chr17	+	3847	2	FSM	ENSMUSG00000024191.16	ENSMUST00000135899.2	3443	2	-216	-188	-191	188	multi-exon	FALSE	canonical	1	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCGAATTTTCACTCT	1803	False	NA	NA	False	NA	NA	NA	26999848	27005096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27000151_27001551
ES.14653.2	chr17	+	1100	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	1	-3	1	3	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTAAATGCTTAACATT	1995	False	NA	18	True	AATAAA	-18	NA	27000040	27011498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ES.14653.3	chr17	+	1161	6	NNC	ENSMUSG00000024191.16	novel	1098	6	NA	NA	1	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.7639007325114	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTAGAAGATATCCCT	1995	False	NA	31	True	AATAAA	-31	NA	27000040	27011511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008819_27009899_27010019_27010914
ES.14653.4	chr17	+	6522	4	NIC	ENSMUSG00000024191.16	novel	1139	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	87	junction_2	6.12825877028341	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	1997	False	NA	15	True	AATAAA	-15	NA	27000042	27011495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27005763_27008668_27008771_27009899_27010019_27010914
ES.14653.5	chr17	+	5108	5	NIC	ENSMUSG00000024191.16	novel	1139	7	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_1	40.3322141718007	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGTGGTAAATGCTTA	2008	False	NA	13	True	AATAAA	-13	NA	27000053	27011493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27000151_27001551_27005763_27008668_27008771_27009899_27010019_27010914
ES.14653.6	chr17	+	6927	1	NIC	ENSMUSG00000024191.16	novel	1098	6	NA	NA	1	-2002	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGTCACGTACAGCCTT	2008	False	NA	NA	False	NA	NA	NA	27000053	27006980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27000100_27007000
ES.14653.7	chr17	+	3347	5	NIC	ENSMUSG00000024191.16	novel	1139	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	87	junction_3	6.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGTGGTAAATGCTTA	2011	False	NA	13	True	AATAAA	-13	NA	27000056	27011493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ES.14653.8	chr17	+	3994	3	NIC	ENSMUSG00000024191.16	novel	1087	7	NA	NA	-1632	-1	intron_retention	FALSE	canonical	3	94	junction_1	4	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGTGGTAAATGCTTA	5652	False	NA	13	True	AATAAA	-13	NA	27003697	27011493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27005763_27008668_27010019_27010914
ES.14654.1	chr17	+	172	1	Intergenic	novelGene_12268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAACAAAA	6957	False	NA	NA	False	NA	NA	NA	27045583	27045755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27045600_27045800
ES.14655.1	chr17	-	178	1	Intergenic	novelGene_12262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	26894793	26894615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26894600_26894800
ES.14655.10	chr17	-	1468	2	FSM	ENSMUSG00000015579.6	ENSMUST00000015723.5	1525	2	51	6	51	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACGCGGGCTTCTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	27060488	27057643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27058622_27059998
ES.14655.2	chr17	-	177	2	NNC	ENSMUSG00000078838.4	novel	1514	2	NA	NA	25719	184629	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	27079430	26894615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_26894770_27079407
ES.14655.3	chr17	-	4831	2	Antisense	novelGene_ENSMUSG00000015575.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGGAGGAAAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	26916216	26910612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_26913556_26914328
ES.14655.4	chr17	-	5571	1	Antisense	novelGene_ENSMUSG00000015575.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26916216	26910645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_26910600_26916200
ES.14655.5	chr17	-	153	1	Intergenic	novelGene_12263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAAAT	2360	False	NA	NA	False	NA	NA	NA	26937188	26937035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26937000_26937200
ES.14655.6	chr17	-	158	1	Intergenic	novelGene_12264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATCTTTTTA	6748	False	NA	NA	False	NA	NA	NA	26950172	26950014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26950000_26950200
ES.14655.7	chr17	-	160	1	Intergenic	novelGene_12265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	3543	False	NA	NA	False	NA	NA	NA	26953377	26953217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26953200_26953400
ES.14655.8	chr17	-	181	1	Intergenic	novelGene_12266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGAGAGAGCT	7349	False	NA	NA	False	NA	NA	NA	26965690	26965509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26965500_26965700
ES.14655.9	chr17	-	1083	1	Intergenic	novelGene_12267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAACCCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	26989091	26988008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_26988000_26989100
ES.14656.1	chr17	+	181	1	Intergenic	novelGene_12269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTATATTTTCTATTC	5305	False	NA	NA	False	NA	NA	NA	27090281	27090462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27090300_27090500
ES.14657.1	chr17	+	2596	1	Genic_Genomic	ENSMUSG00000024301.11	novel	NA	NA	NA	NA	-226	-2048	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	27135838	27138434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_27135800_27138400
ES.14657.10	chr17	+	2276	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	11	-296	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	139.001554303416	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27136075	27151261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.11	chr17	+	4748	27	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2522	15	NA	NA	11	0	multi-exon	FALSE	canonical	0	0	junction_11	126.25102378166	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGCATGAGTCATTTT	NA	False	NA	3	True	AATAAA	-13	NA	27136075	27156863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141789_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077_27151150_27151873_27151929_27152125_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155496_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.12	chr17	+	3895	9	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	-3	-296	intron_retention	FALSE	canonical	3	7	junction_3	123.047754957171	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27136091	27151261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140552_27140835_27141649_27141698_27141878_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.13	chr17	+	2604	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	27	0	-3	0	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATTGTGATGTGTTTG	NA	False	NA	8	True	AATAAA	-20	NA	27136091	27151557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.14	chr17	+	2254	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	-3	-296	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27136091	27151261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.15	chr17	+	2902	11	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	143.545846334891	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTCCATTGTGATGT	NA	False	NA	3	True	AATAAA	-15	NA	27136105	27151552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140552_27140835_27141649_27141698_27141789_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.16	chr17	+	5483	25	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	15	1	intron_retention	FALSE	canonical	1	1	junction_11	127.357981907517	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCATGAGTCATTTTGAA	NA	False	NA	6	True	AATAAA	-16	NA	27136109	27156866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077_27151929_27152125_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.17	chr17	+	1441	3	FSM	ENSMUSG00000024301.11	ENSMUST00000236476.2	819	3	56	-678	-26	678	multi-exon	FALSE	canonical	3	106	junction_1	42	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	27136120	27141160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27136260_27139770_27139906_27139993
ES.14657.18	chr17	+	2507	11	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	-26	-296	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	133.860225608655	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27136120	27151261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140552_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.19	chr17	+	5359	26	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2522	15	NA	NA	-20	1	multi-exon	FALSE	canonical	1	1	junction_3	127.578894806312	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCATGAGTCATTTTGAA	NA	False	NA	6	True	AATAAA	-16	NA	27136126	27156866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140107_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077_27151929_27152125_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.2	chr17	+	2574	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	-215	272	-215	-272	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTGTGTGCAGTTG	NA	False	NA	31	True	AATAAA	-44	NA	27135849	27151285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.20	chr17	+	4612	27	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2522	15	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_11	125.087874437777	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGAGTCATTTTGA	NA	False	NA	5	True	AATAAA	-15	NA	27136146	27156865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077_27151150_27151851_27151929_27152125_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155496_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.21	chr17	+	5476	15	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	7107	-18	intron_retention	FALSE	canonical	1	1	junction_4	132.437586378317	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGATAAATAAACCTA	NA	False	NA	-15	True	NA	NA	NA	27143253	27156845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27144707_27144799_27144874_27145193_27145270_27151077_27151929_27152125_27152509_27153167_27153343_27153427_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.22	chr17	+	5031	17	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	7259	5	intron_retention	FALSE	canonical	3	8	junction_4	125.160131806219	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCATTTTGAAAGATTG	NA	False	NA	12	True	AATAAA	-22	NA	27143405	27156872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27144707_27144799_27144874_27145193_27145270_27151077_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.23	chr17	+	5976	14	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	7388	0	intron_retention	FALSE	canonical	3	12	junction_7	134.761064030744	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGAGTCATTTTGA	NA	False	NA	5	True	AATAAA	-15	NA	27143534	27156865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27144707_27144799_27144874_27145193_27145270_27151077_27153343_27153427_27153510_27153604_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.24	chr17	+	4485	12	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	-6829	0	intron_retention	FALSE	canonical	3	12	junction_5	95.8674187796411	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGAGTCATTTTGA	NA	False	NA	5	True	AATAAA	-15	NA	27145196	27156865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27145270_27151077_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.25	chr17	+	4130	1	Intergenic	novelGene_12271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCATGTGACTGT	NA	False	NA	NA	False	AATAAA	-2	NA	27145384	27149514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27145400_27149500
ES.14657.26	chr17	+	2477	15	FSM	ENSMUSG00000024193.9	ENSMUST00000073724.7	2522	15	27	18	27	0	multi-exon	FALSE	canonical	2	7	junction_11	6.30718734816859	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATGAGTCATTTTG	NA	False	NA	4	True	AATAAA	-14	NA	27152052	27156864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.27	chr17	+	3740	10	NIC	ENSMUSG00000024193.9	novel	2526	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	12	junction_3	5.61303597347337	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGCATGAGTCATTTT	NA	False	NA	3	True	AATAAA	-13	NA	27152074	27156863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27153510_27153604_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.28	chr17	+	2835	13	NIC	ENSMUSG00000024193.9	novel	1972	14	NA	NA	-28	-18	intron_retention	FALSE	canonical	3	8	junction_1	6.42045342808607	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGATAAATAAACCTA	NA	False	NA	-15	True	NA	NA	NA	27152076	27156845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27152509_27153167_27153510_27153604_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155496_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.29	chr17	+	2335	14	NIC	ENSMUSG00000024193.9	novel	2522	15	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	7.5869710805772	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATGAGTCATTTTG	NA	False	NA	4	True	AATAAA	-14	NA	27152089	27156864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155485_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.3	chr17	+	3015	12	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	-180	-296	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	148.626938817123	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTTCTTAATCTTAG	NA	False	NA	7	True	AATAAA	-20	NA	27135884	27151261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27136597_27137009_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141789_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.30	chr17	+	1775	10	NNC	ENSMUSG00000024193.9	novel	2094	15	NA	NA	1593	0	intron_retention	FALSE	canonical	0	0	junction_6	9.4058033044748	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATGAGTCATTTTG	NA	False	NA	4	True	AATAAA	-14	NA	27154026	27156864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155271_27155655_27155744_27155840_27156030_27156109_27156253
ES.14657.4	chr17	+	6691	22	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2526	14	NA	NA	-6	0	intron_retention	TRUE	non_canonical	0	0	junction_18	114.147614975238	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATGAGTCATTTTG	NA	False	NA	4	True	AATAAA	-14	NA	27136058	27156864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140094_27140552_27140835_27141649_27141698_27141878_27142277_27142982_27144707_27144799_27144874_27145193_27145270_27151077_27152509_27153167_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155264_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.5	chr17	+	1410	1	Genic_Genomic	ENSMUSG00000024301.11	novel	NA	NA	NA	NA	-6	-3014	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGGAAAACAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	27136058	27137468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_27136100_27137500
ES.14657.6	chr17	+	2363	10	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	1	-302	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	149.09264664614	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTAATCCTTTTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	27136065	27151255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141789_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.7	chr17	+	2917	11	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	10	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.706807815201	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAATCCTTTTCTTAAT	NA	False	NA	2	True	AATAAA	-15	NA	27136074	27151256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27136597_27137249_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ES.14657.8	chr17	+	4705	27	Fusion	ENSMUSG00000024301.11_ENSMUSG00000024193.9	novel	2522	15	NA	NA	10	0	multi-exon	FALSE	canonical	0	0	junction_5	126.357603977126	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATGAGTCATTTTG	NA	False	NA	4	True	AATAAA	-14	NA	27136074	27156864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141720_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077_27151172_27151873_27151929_27152125_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155496_27155655_27155744_27155840_27156027_27156109_27156253
ES.14657.9	chr17	+	3503	11	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	11	-2079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	128.754650401452	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27136075	27149478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27148115
ES.14658.1	chr17	-	1838	4	NNC	ENSMUSG00000118147.2	novel	1130	5	NA	NA	19656	967	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGCAAGCCGTGTTTT	7	True	NA	NA	False	CATAAA	-16	NA	27133881	27114320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27115725_27119163_27119357_27119588_27119733_27133784
ES.14658.10	chr17	-	859	5	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	300	junction_4	285.772090134779	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9346	False	NA	-18	True	AATAAA	-17	NA	27158449	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157761_27157857_27158067_27158290_27158343_27158424
ES.14658.12	chr17	-	792	6	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	300	junction_5	273.070979783645	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9309	False	NA	-18	True	AATAAA	-17	NA	27158486	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290_27158343_27158424
ES.14658.13	chr17	-	679	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	-17	0	9	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9261	False	NA	-18	True	AATAAA	-17	NA	27158534	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
ES.14658.14	chr17	-	975	5	NIC	ENSMUSG00000024194.17	novel	937	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	300	junction_4	269.681641013993	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9345	False	NA	-18	True	AATAAA	-17	NA	27158450	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857_27158343_27158424
ES.14658.15	chr17	-	754	6	NIC	ENSMUSG00000024194.17	novel	741	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	300	junction_5	259.797613537923	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9342	False	NA	-18	True	AATAAA	-17	NA	27158453	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ES.14658.16	chr17	-	767	5	NIC	ENSMUSG00000024194.17	novel	662	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	227	junction_4	300.390579079971	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9277	False	NA	-18	True	AATAAA	-17	NA	27158518	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857_27158067_27158424
ES.14658.18	chr17	-	691	5	NIC	ENSMUSG00000024194.17	novel	662	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	227	junction_4	288.735497471302	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9346	False	NA	-18	True	AATAAA	-17	NA	27158449	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27158067_27158424
ES.14658.2	chr17	-	1540	2	NNC	ENSMUSG00000024194.17	novel	1476	2	NA	NA	23	20032	intron_retention	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAAGCTGGTGATAAT	9323	False	NA	NA	False	AAAACA	-29	NA	27158472	27132760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27132777_27156948
ES.14658.20	chr17	-	769	6	NNC	ENSMUSG00000024194.17	novel	622	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	406.81297914398	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9403	False	NA	-18	True	AATAAA	-17	NA	27158392	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157756_27157857_27158170_27158290
ES.14658.21	chr17	-	816	5	NIC	ENSMUSG00000024194.17	novel	937	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_2	411.522402184863	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9354	False	NA	-18	True	AATAAA	-17	NA	27158441	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157442_27157700_27157761_27157857_27158343_27158424
ES.14658.22	chr17	-	971	5	NIC	ENSMUSG00000024194.17	novel	937	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	300	junction_4	279.974440797727	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTTCTCTGTGACA	9353	False	NA	-19	True	AATAAA	-16	NA	27158442	27156947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158343_27158424
ES.14658.24	chr17	-	848	4	NIC	ENSMUSG00000024194.17	novel	662	6	NA	NA	3	1	intron_retention	FALSE	canonical	3	227	junction_3	344.308969773758	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTTTTCTCTGTGAC	9303	False	NA	-20	True	AATAAA	-15	NA	27158492	27156948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157761_27157857_27158067_27158424
ES.14658.26	chr17	-	628	6	NIC	ENSMUSG00000024194.17	novel	719	6	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	408.534258049432	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTTTTCTCTGTGAC	9342	False	NA	-20	True	AATAAA	-15	NA	27158453	27156948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27157151_27157391_27157442_27157545_27157624_27157700_27157761_27157857_27158067_27158424
ES.14658.27	chr17	-	1401	2	ISM	ENSMUSG00000024194.17	ENSMUST00000235460.2	475	3	63	-631	-11	-2	intron_retention	FALSE	canonical	3	982	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGATGCCTTTTCTCTGT	9346	False	NA	-23	True	AATAAA	-12	NA	27158449	27156951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27157761_27157857
ES.14658.3	chr17	-	307	1	Intergenic	novelGene_12270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAGAATGTGGATT	177	False	NA	NA	False	NA	NA	NA	27133738	27133431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27133400_27133700
ES.14658.4	chr17	-	2186	3	Antisense	novelGene_ENSMUSG00000024301.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCAACCAAATAGACTC	NA	False	NA	NA	False	NA	NA	NA	27144285	27141212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27141698_27141878_27142275_27142980
ES.14658.5	chr17	-	399	1	Intergenic	novelGene_12272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCACCACAGA	NA	False	NA	NA	False	NA	NA	NA	27150411	27150012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27150000_27150400
ES.14658.6	chr17	-	170	1	Intergenic	novelGene_12273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAGAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	27150411	27150241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27150200_27150400
ES.14658.8	chr17	-	720	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	20	1	-4	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9272	False	NA	-18	True	AATAAA	-17	NA	27158523	27156946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ES.14659.1	chr17	+	1717	2	NNC	ENSMUSG00000079605.6	novel	2796	2	NA	NA	-10	-1074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGGGTATGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	27192130	27194103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529
ES.14659.10	chr17	+	2984	1	NIC	ENSMUSG00000079605.6	novel	2796	2	NA	NA	-4	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGACAGTAGACTGGCT	NA	False	NA	9	True	AATAAA	-17	NA	27192186	27195170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27192200_27195200
ES.14659.11	chr17	+	2086	2	NNC	ENSMUSG00000079605.6	novel	2796	2	NA	NA	-3	-648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCCTGAGTTCAATT	NA	False	NA	NA	False	NA	NA	NA	27192187	27194529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529
ES.14659.12	chr17	+	5350	3	NNC	ENSMUSG00000079605.6	novel	3432	4	NA	NA	17	4017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTATATGTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	27192207	27199194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192334_27192529_27195370_27196810
ES.14659.13	chr17	+	3688	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	89	-981	39	981	multi-exon	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGGGTTTCTCTGTAT	NA	False	NA	NA	False	AATAAA	-25	NA	27192229	27196158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27192289_27192529
ES.14659.2	chr17	+	2790	2	NNC	ENSMUSG00000079605.6	novel	2796	2	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTGGCTTGAGTGAG	NA	False	NA	17	True	AATAAA	-25	NA	27192132	27195178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529
ES.14659.3	chr17	+	2794	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	1	1	1	-1	multi-exon	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGACTGGCTTGAGTG	NA	False	NA	15	True	AATAAA	-23	NA	27192141	27195176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27192289_27192529
ES.14659.4	chr17	+	3236	2	NNC	ENSMUSG00000079605.6	novel	3432	4	NA	NA	-22	483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGCGAGCCCCTGGT	NA	False	NA	NA	False	TATAAA	-14	NA	27192168	27195660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529
ES.14659.5	chr17	+	3860	2	NNC	ENSMUSG00000079605.6	novel	3432	4	NA	NA	-22	1107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTGTCTTGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27192168	27196284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529
ES.14659.6	chr17	+	6139	3	NNC	ENSMUSG00000079605.6	novel	3432	4	NA	NA	-20	4024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGTTTTATTGC	NA	False	NA	NA	False	NA	NA	NA	27192170	27199201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192274_27192529_27196607_27197242
ES.14659.7	chr17	+	2118	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	31	647	-19	-647	multi-exon	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCCTGAGTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	27192171	27194530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27192289_27192529
ES.14659.8	chr17	+	4342	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	31	-1577	-19	1577	multi-exon	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCGAAAGCAAAAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	27192171	27196754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27192289_27192529
ES.14659.9	chr17	+	2805	2	NNC	ENSMUSG00000079605.6	novel	2796	2	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTAGACTGGCTTGA	NA	False	NA	12	True	AATAAA	-20	NA	27192172	27195173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27192334_27192529
ES.1466.1	chr1	-	180	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGACATACAATGTTA	NA	False	NA	NA	False	NA	NA	NA	136376447	136376267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136376300_136376400
ES.14660.1	chr17	+	206	1	Intergenic	novelGene_12274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTCTCTCTCTCTCT	6960	False	NA	NA	False	AAAAAG	-8	NA	27210303	27210509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27210300_27210500
ES.14661.1	chr17	-	247	1	Intergenic	novelGene_12275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAATCTAAATCCCCC	NA	False	NA	NA	False	NA	NA	NA	27217368	27217121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27217100_27217400
ES.14662.1	chr17	+	756	4	NNC	ENSMUSG00000079605.6	novel	3432	4	NA	NA	31539	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16024689946929	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTTATGAAAAAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	27223729	27227334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27223787_27224706_27224928_27226165_27226351_27227041
ES.14663.1	chr17	+	988	6	NIC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	9.84682690007294	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGCTGTCTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	27236991	27255350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27237145_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
ES.14663.2	chr17	+	411	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	41	-1	15	1	multi-exon	FALSE	canonical	3	59	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTAGCGCCGGTTAATAT	NA	False	NA	23	True	AGTAAA	-15	NA	27237001	27241492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27237145_27241224
ES.14663.3	chr17	+	2299	9	NIC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	21	-1	intron_retention	FALSE	canonical	2	3	junction_2	17.8321163914999	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGCTGTCTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	27237007	27255350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27237145_27241224_27241315_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
ES.14663.4	chr17	+	2329	10	NNC	ENSMUSG00000048731.16	novel	1138	7	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_2	17.870591056016	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCCTGGGCTGTCTGT	NA	False	NA	15	True	AATAAA	-16	NA	27237025	27255348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27237145_27241224_27241315_27242127_27242178_27244310_27244434_27247806_27248921_27249649_27249775_27251536_27251632_27251734_27251946_27253738_27253879_27255086
ES.14663.5	chr17	+	2952	4	ISM	ENSMUSG00000048731.16	ENSMUST00000154731.3	1108	5	-637	1	355	-1	intron_retention	FALSE	canonical	2	8	junction_1	9.46337971105226	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGCTGTCTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	27248740	27255350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27249775_27251536_27251632_27251734_27251946_27253738
ES.14663.6	chr17	+	160	1	Intergenic	novelGene_12276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATACATA	NA	False	NA	NA	False	NA	NA	NA	27250945	27251105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27250900_27251100
ES.14664.1	chr17	-	2003	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	383	1	-39	1	multi-exon	TRUE	canonical	3	126	junction_3	5.45527267879434	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGCCTGGCATCTTTAC	NA	False	NA	-1	True	AATAAA	-19	NA	27247600	27238784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ES.14664.2	chr17	-	3007	5	NIC	ENSMUSG00000057789.15	novel	1974	7	NA	NA	38	0	intron_retention	FALSE	canonical	3	126	junction_2	6.01560470775798	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	-2	True	AATAAA	-18	NA	27247514	27238785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27240010_27240140_27241557_27241715_27241852_27244766_27244868_27247384
ES.14665.1	chr17	+	8890	58	Fusion	ENSMUSG00000098826.3_ENSMUSG00000042644.10	novel	350	2	NA	NA	-19507	0	multi-exon	TRUE	non_canonical	0	0	junction_3	55.8390103369304	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27256770	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27257039_27292071_27292143_27302503_27302626_27304059_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.11	chr17	+	9016	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	55.2758715534419	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCACAGGGTCATACTTC	NA	False	NA	14	True	AATAAA	-18	NA	27276283	27341195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318785_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336923_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.13	chr17	+	8617	56	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	58.1858066814713	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27276293	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27312166_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321903_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.14	chr17	+	8957	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	18	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	48.4846455023872	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTCCATCCACAGGGT	NA	False	NA	6	True	AATAAA	-10	NA	27276295	27341187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315027_27316923_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.15	chr17	+	8960	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	52.2067297242518	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27276300	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308067_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.16	chr17	+	8891	57	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	23	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52.8052079557017	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCCACAGGGTCATAC	NA	False	NA	11	True	AATAAA	-15	NA	27276300	27341192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27276649_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.18	chr17	+	9395	56	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	37	0	intron_retention	FALSE	canonical	0	0	junction_18	49.1663864212025	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27276314	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.19	chr17	+	8939	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.9088328838503	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCACAGGGTCATACTT	NA	False	NA	13	True	AATAAA	-17	NA	27276316	27341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308812_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.21	chr17	+	9044	57	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	42	-5	intron_retention	FALSE	canonical	0	0	junction_18	48.8264836969045	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCCACAGGGTCATAC	NA	False	NA	11	True	AATAAA	-15	NA	27276319	27341192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.23	chr17	+	2072	6	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	47	33769	47	-18895	intron_retention	FALSE	canonical	3	95	junction_5	12.7216351150314	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGCCATGTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	27276324	27307428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119
ES.14665.26	chr17	+	8752	58	Fusion	ENSMUSG00000098826.3_ENSMUSG00000042644.10	novel	350	2	NA	NA	9416	0	multi-exon	FALSE	canonical	0	0	junction_18	52.2343842867507	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27285693	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27285827_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.28	chr17	+	8526	52	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-19019	-1	intron_retention	FALSE	canonical	0	0	junction_13	53.636121462752	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27306131	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329786_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.29	chr17	+	9190	51	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-18572	-3	intron_retention	FALSE	canonical	0	0	junction_12	48.9330317883534	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCACAGGGTCATACTT	NA	False	NA	13	True	AATAAA	-17	NA	27306578	27341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.3	chr17	+	8995	59	Fusion	ENSMUSG00000098826.3_ENSMUSG00000042644.10	novel	350	2	NA	NA	-3610	-7	multi-exon	FALSE	canonical	0	0	junction_1	55.6230973034281	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	NA	False	NA	9	True	AATAAA	-13	NA	27272667	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27272905_27272980_27273127_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.30	chr17	+	8079	42	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-11349	0	intron_retention	FALSE	canonical	0	0	junction_3	53.7863887034266	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27313801	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330647_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.31	chr17	+	6686	41	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-10267	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.1313231531081	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCCACAGGGTCATAC	NA	False	NA	11	True	AATAAA	-15	NA	27314883	27341192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330818_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.34	chr17	+	5854	36	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-6548	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	46.817631424976	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27318602	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.35	chr17	+	8733	27	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-4546	-2	intron_retention	FALSE	canonical	0	0	junction_21	49.1056703844406	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCACAGGGTCATACTTC	NA	False	NA	14	True	AATAAA	-18	NA	27320604	27341195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27321907_27322806_27322972_27323047_27323123_27323498_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27330547_27330638_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333917_27334001_27334104_27334188_27334758_27334859_27335272_27335582_27335756_27336139_27336305_27336706_27336869_27337334_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.36	chr17	+	5672	34	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-3489	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.652900541189	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27321661	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326458_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.37	chr17	+	5255	32	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	46768	8	-2105	-8	3prime_fragment	FALSE	canonical	3	127	junction_1	31.6528385018425	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCATCCACAGGGTCA	NA	False	NA	8	True	AATAAA	-12	NA	27323045	27341189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.38	chr17	+	5721	30	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	47528	1	-1345	-1	3prime_fragment	FALSE	canonical	3	147	junction_3	28.502080780165	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27323805	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.39	chr17	+	5901	29	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-1127	-1	intron_retention	FALSE	canonical	3	26	junction_23	41.1890241968138	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27324023	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336900_27337334_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.4	chr17	+	9008	58	Fusion	ENSMUSG00000098826.3_ENSMUSG00000042644.10	novel	350	2	NA	NA	-3537	-1	multi-exon	FALSE	canonical	0	0	junction_1	52.4382648648632	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27272740	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_27273131_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.40	chr17	+	4979	29	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	48860	0	-13	0	3prime_fragment	FALSE	canonical	3	147	junction_2	28.8194591290294	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27325137	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.43	chr17	+	4545	28	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	1279	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.9562444078409	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCACAGGGTCATACTT	1035	False	NA	13	True	AATAAA	-17	NA	27326429	27341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330359_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.44	chr17	+	4399	27	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	1481	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	46.3796399933975	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	1237	False	NA	15	True	AATAAA	-19	NA	27326631	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336269_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.46	chr17	+	4364	28	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	1487	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	46.2011466671637	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	1243	False	NA	16	True	AATAAA	-20	NA	27326637	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333096_27333161_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.47	chr17	+	4105	24	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	53526	7	4653	-7	3prime_fragment	FALSE	canonical	3	166	junction_3	25.5544194883688	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	4409	False	NA	9	True	AATAAA	-13	NA	27329803	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.48	chr17	+	3917	23	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	5018	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_17	44.6439541777842	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCACAGGGTCATACTTC	4774	False	NA	14	True	AATAAA	-18	NA	27330168	27341195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337334_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.5	chr17	+	9291	58	FSM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	-301	0	-301	0	multi-exon	FALSE	canonical	0	0	junction_18	48.4846455023872	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27275976	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.50	chr17	+	3661	21	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	5487	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.6665026879118	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	5243	False	NA	9	True	AATAAA	-13	NA	27330637	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334763_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.51	chr17	+	3731	20	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	5487	-7	intron_retention	FALSE	canonical	0	0	junction_3	52.7425671858301	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	5243	False	NA	9	True	AATAAA	-13	NA	27330637	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27331001_27332464_27332640_27332717_27332874_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.53	chr17	+	3060	18	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	7722	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	67.9012615116899	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	7478	False	NA	15	True	AATAAA	-19	NA	27332872	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337334_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339910_27340067_27340433
ES.14665.54	chr17	+	4178	13	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	8029	-7	intron_retention	FALSE	canonical	3	186	junction_5	19.6171693506819	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	7785	False	NA	9	True	AATAAA	-13	NA	27333179	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27333255_27333368_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335272_27335582_27335756_27336139_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.55	chr17	+	3879	13	NIC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	8313	-8	intron_retention	FALSE	canonical	3	186	junction_4	21.3546443036013	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCATCCACAGGGTCA	8069	False	NA	8	True	AATAAA	-12	NA	27333463	27341189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904
ES.14665.56	chr17	+	2447	12	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	58368	1	9495	-1	3prime_fragment	FALSE	canonical	3	186	junction_1	22.4720211716078	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	9251	False	NA	15	True	AATAAA	-19	NA	27334645	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.57	chr17	+	1891	6	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	60577	7	11704	-7	intron_retention	FALSE	canonical	3	212	junction_4	15.447977213862	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	NA	False	NA	9	True	AATAAA	-13	NA	27336854	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904
ES.14665.58	chr17	+	1755	2	ISM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	62791	7	13918	-7	3prime_fragment	FALSE	canonical	3	199	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	NA	False	NA	9	True	AATAAA	-13	NA	27339068	27341190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27340067_27340433
ES.14665.6	chr17	+	9052	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	51.9710303564068	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27276247	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333335_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.8	chr17	+	8985	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	52.5982584584256	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACAGGGTCATACTTCT	NA	False	NA	15	True	AATAAA	-19	NA	27276275	27341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27330995_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14665.9	chr17	+	9048	58	NNC	ENSMUSG00000042644.10	novel	8990	58	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	52.2860117402313	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27276280	27341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306503_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ES.14666.1	chr17	-	355	1	Intergenic	novelGene_12277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	27263869	27263514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27263500_27263900
ES.14667.1	chr17	-	875	2	FSM	ENSMUSG00000117799.2	ENSMUST00000236359.2	515	2	-361	1	-361	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGGGTGTGGTGACA	NA	False	NA	NA	False	NA	NA	NA	27270749	27267250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27267726_27270349
ES.14668.1	chr17	-	381	1	Intergenic	novelGene_12278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGGCCTGAAGAG	NA	False	NA	NA	False	NA	NA	NA	27275051	27274670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27274700_27275100
ES.14668.2	chr17	-	190	1	Intergenic	novelGene_12279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCAAAACAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	27275053	27274863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27274900_27275100
ES.14669.1	chr17	-	193	1	Intergenic	novelGene_12280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	27286990	27286797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27286800_27287000
ES.1467.1	chr1	+	153	2	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	136392761	136521256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136392811_136521152
ES.1467.10	chr1	+	5456	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	29	1931	intron_retention	FALSE	canonical	1	1	junction_30	13.9847536028824	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394109	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136455349_136457015
ES.1467.100	chr1	+	3657	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53785	27042	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.8576339263735	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATATGTAGGTCTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	136498853	136584833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136526570_136526669_136551065_136551108_136552368_136552790_136553009_136555702_136584532
ES.1467.101	chr1	+	3522	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53773	-1732	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.1996168568314	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACTTTGTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	136498865	136556059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.102	chr1	+	3825	3	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-53767	-1725	intron_retention	FALSE	canonical	1	2	junction_1	3.5	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGCTAGGATTAAGG	NA	False	NA	NA	False	NA	NA	NA	136498871	136556066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136551065_136551108_136552368
ES.1467.103	chr1	+	5247	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53766	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.1996168568314	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATCACTTAGTCTCT	NA	False	NA	16	True	AATAAA	-29	NA	136498872	136557791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.104	chr1	+	5160	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.9323395250831	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	False	NA	3	True	AATAAA	-16	NA	136498897	136557778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136551065_136551108_136552598_136552790_136553009
ES.1467.105	chr1	+	5298	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	-443	intron_retention	FALSE	canonical	0	0	junction_2	58.0403954156069	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTGTAAAACACTTCTG	NA	False	NA	3	True	AATAAA	-15	NA	136498897	136557348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136526570_136526661_136551065_136551108_136552021_136552790_136553009
ES.1467.106	chr1	+	3519	7	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.9931968066316	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136498897	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136526570_136526669_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.107	chr1	+	5884	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	2	intron_retention	FALSE	canonical	0	0	junction_1	57.660103191028	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCACTTAGTCTCTGT	NA	False	NA	18	True	AATAAA	-31	NA	136498897	136557793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136541903_136542135_136551065_136551108_136552021_136552790_136553009
ES.1467.108	chr1	+	4764	3	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	-1801	intron_retention	FALSE	canonical	1	2	junction_1	70.5	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136498897	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136551065_136552790_136553009
ES.1467.109	chr1	+	5391	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53741	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	58.349700084919	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAGAAAGGAGATATC	NA	False	NA	5	True	AATAAA	-18	NA	136498897	136557780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136526570_136526669_136551065_136551108_136552368_136552790_136553009
ES.1467.11	chr1	+	4580	21	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	29	8393	intron_retention	FALSE	canonical	3	49	junction_13	8.08006806902021	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCAAGGTTTTACTTT	NA	False	NA	NA	False	NA	NA	NA	136394109	136432047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.111	chr1	+	169	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAGTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	136512618	136512787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136512600_136512800
ES.1467.112	chr1	+	2113	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAAAATACCAAAGTTAA	NA	False	NA	NA	False	AATATA	-22	NA	136515822	136517935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136515800_136517900
ES.1467.113	chr1	+	2072	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTTATCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	136536210	136538282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136536200_136538300
ES.1467.114	chr1	+	158	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	136541949	136542107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136541900_136542100
ES.1467.115	chr1	+	5608	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	-688	13	-688	-13	multi-exon	FALSE	canonical	3	143	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	False	NA	3	True	AATAAA	-16	NA	136551950	136557778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136552790_136553009
ES.1467.116	chr1	+	3453	3	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-619	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.5	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136552019	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136552071_136552368_136552790_136553009
ES.1467.117	chr1	+	8166	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	16	-3249	16	3249	multi-exon	FALSE	canonical	3	143	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAAAATTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	136552654	136561040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136552790_136553009
ES.1467.118	chr1	+	4640	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	40	253	40	-253	multi-exon	FALSE	canonical	3	143	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTGTATGTCTTATT	NA	False	NA	NA	False	AATACA	-11	NA	136552678	136557538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136552790_136553009
ES.1467.119	chr1	+	7391	1	Genic_Genomic	ENSMUSG00000041483.15	novel	NA	NA	NA	NA	46	2284	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGTAATCCAGTACAA	NA	False	NA	NA	False	AATAAA	-12	NA	136552684	136560075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_136552700_136560100
ES.1467.12	chr1	+	7076	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	35	1930	intron_retention	FALSE	non_canonical	0	0	junction_10	17.1556275185595	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394115	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410782_136414003_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.120	chr1	+	4653	1	NIC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	57	-443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTGTAAAACACTTCTG	NA	False	NA	3	True	AATAAA	-15	NA	136552695	136557348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136552700_136557300
ES.1467.121	chr1	+	7914	2	FSM	ENSMUSG00000041483.15	ENSMUST00000112046.2	4937	2	68	-3045	68	3045	multi-exon	FALSE	canonical	3	71	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTGTGGTGAACTTG	NA	False	NA	20	True	AATAAA	-12	NA	136552706	136560836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136552790_136553005
ES.1467.122	chr1	+	4756	2	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	70	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	False	NA	3	True	AATAAA	-16	NA	136552708	136557778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136552736_136553049
ES.1467.123	chr1	+	5205	2	FSM	ENSMUSG00000041483.15	ENSMUST00000112046.2	4937	2	78	-346	78	346	multi-exon	FALSE	canonical	3	71	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGAGCATTTTTAGT	NA	False	NA	NA	False	AATAAA	-23	NA	136552716	136558137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136552790_136553005
ES.1467.125	chr1	+	3529	1	Genic_Genomic	ENSMUSG00000041483.15	novel	NA	NA	NA	NA	4436	2812	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGGGTAAAGGTCGAG	NA	False	NA	NA	False	AATAAA	-12	NA	136557074	136560603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_136557100_136560600
ES.1467.126	chr1	+	248	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTTTTGATCCCTT	NA	False	NA	NA	False	NA	NA	NA	136562611	136562859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136562600_136562900
ES.1467.13	chr1	+	5250	30	NIC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	35	64	intron_retention	FALSE	canonical	3	34	junction_23	10.0298010170856	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCAAGTCCATGCCTGT	NA	False	NA	NA	False	CATAAA	-17	NA	136394115	136455448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.14	chr1	+	1654	4	NNC	ENSMUSG00000041498.14	novel	4102	15	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_3	28.1108915230774	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTGCTGTGATG	NA	False	NA	NA	False	ATTAAA	-12	NA	136394119	136399460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136399405
ES.1467.15	chr1	+	7062	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	39	1930	intron_retention	FALSE	non_canonical	0	0	junction_30	14.112602720815	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394119	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456666_136456715
ES.1467.16	chr1	+	6161	29	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	47	750	intron_retention	FALSE	non_canonical	0	0	junction_6	18.9802192950924	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTACTGTGTTTTCTGTG	NA	False	NA	NA	False	AATATA	-35	NA	136394127	136456134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406154_136407528_136407654_136410125_136410243_136410661_136410775_136414007_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.17	chr1	+	4669	21	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	49	8254	intron_retention	FALSE	canonical	3	13	junction_1	12.9707362936728	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGTTTTCTTGCCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	136394129	136431908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.18	chr1	+	3853	21	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	49	7565	intron_retention	FALSE	canonical	0	0	junction_1	15.3390840665276	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394129	136431219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394258_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.19	chr1	+	7350	30	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	49	1930	intron_retention	FALSE	canonical	3	13	junction_1	12.7319385489885	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394129	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.2	chr1	+	3771	20	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	2	7565	intron_retention	FALSE	non_canonical	0	0	junction_6	15.7409781574018	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394082	136431219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406156_136407528_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.20	chr1	+	6155	30	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	49	735	intron_retention	FALSE	canonical	3	13	junction_1	12.7319385489885	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATAGCATCGTAGCTT	NA	False	NA	NA	False	CATAAA	-31	NA	136394129	136456119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.21	chr1	+	11636	27	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	50	1931	intron_retention	FALSE	canonical	3	13	junction_1	13.1703113323762	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394130	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136447523_136448927_136449048_136453519_136454646_136454983
ES.1467.22	chr1	+	7299	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	51	1931	intron_retention	FALSE	canonical	0	0	junction_30	15.9389111575694	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394131	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456674_136456723
ES.1467.23	chr1	+	3968	21	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	61	7565	intron_retention	FALSE	canonical	3	13	junction_1	12.9707362936728	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394141	136431219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.24	chr1	+	7286	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	68	1931	intron_retention	FALSE	non_canonical	0	0	junction_10	18.5654697399949	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394148	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410782_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456666_136456715
ES.1467.25	chr1	+	5606	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	100	1930	intron_retention	FALSE	canonical	0	0	junction_5	18.4837766703669	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394180	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394385_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404151_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136455349_136457015
ES.1467.26	chr1	+	7097	29	FSM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-88	1934	-88	1931	multi-exon	FALSE	canonical	3	34	junction_22	10.1365045498829	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136395584	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.28	chr1	+	8196	27	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	-88	1931	intron_retention	FALSE	canonical	3	34	junction_22	10.0443542975364	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136395584	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136444180_136447366_136447523_136448927_136449048_136453519_136454646_136454983
ES.1467.3	chr1	+	7105	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	2	-1929	intron_retention	TRUE	non_canonical	0	0	junction_30	14.112602720815	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTAATCCAGGACCTT	NA	False	NA	29	True	AATAAA	-20	NA	136394082	136457320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.30	chr1	+	3694	19	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	-88	7544	intron_retention	FALSE	non_canonical	0	0	junction_5	20.7635869543265	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAGCAAAACAA	NA	False	NA	NA	False	ATTAAA	-7	NA	136395584	136431198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406154_136407528_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427886_136430389_136430479_136431047
ES.1467.31	chr1	+	5387	20	ISM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	-84	26365	-84	9230	5prime_fragment	FALSE	canonical	3	49	junction_12	7.93114412247141	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTCTCTGTGGCTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	136395588	136432884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.32	chr1	+	5614	29	FSM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	399	2930	376	935	multi-exon	FALSE	canonical	3	34	junction_22	10.1365045498829	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTTAAGAACCCTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	136396071	136456319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.33	chr1	+	3594	22	ISM	ENSMUSG00000041498.14	ENSMUST00000189413.7	8943	29	419	17462	396	-13597	5prime_fragment	FALSE	canonical	3	44	junction_20	8.72585752629282	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	136396091	136441787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471
ES.1467.35	chr1	+	5023	21	ISM	ENSMUSG00000041498.14	ENSMUST00000047817.12	8770	30	14964	1931	6582	-1931	3prime_fragment	FALSE	canonical	3	34	junction_14	11.0679718105893	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCTCCTAATCCAGGACC	NA	False	NA	27	True	AATAAA	-18	NA	136410659	136457318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.36	chr1	+	4869	22	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	6682	1931	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.4248362422582	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136410759	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136410770_136414002_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.37	chr1	+	5352	16	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	19583	-694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	17.3223041833996	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGTGTGATTCCCTT	8314	False	NA	NA	False	NA	NA	NA	136423660	136458555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.38	chr1	+	3880	14	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	21022	-1922	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.1942063078479	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGGACCTTTCTTATT	9753	False	NA	36	True	AATAAA	-27	NA	136425099	136457327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.39	chr1	+	3645	10	NNC	ENSMUSG00000041498.14	novel	4990	28	NA	NA	30122	1931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9647419413265	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136434199	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136434432_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.4	chr1	+	7150	30	NIC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	2	1931	intron_retention	FALSE	canonical	3	34	junction_23	10.0298010170856	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGCCTCCTAATCCAGG	NA	False	NA	24	True	AATAAA	-15	NA	136394082	136457315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
ES.1467.41	chr1	+	5216	5	NNC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	41754	1928	intron_retention	FALSE	non_canonical	0	0	junction_4	23.5411873107539	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAACCGCCTCCTAATCC	NA	False	NA	21	True	AATAAA	-12	NA	136445831	136457312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136447523_136448927_136449048_136453519_136454646_136454983_136456691_136456740
ES.1467.42	chr1	+	171	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAGACAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	136484455	136484626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136484500_136484600
ES.1467.43	chr1	+	218	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCATCTATACATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	136486245	136486463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136486200_136486500
ES.1467.44	chr1	+	3526	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58334	-1725	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	57.5577005177317	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGCTAGGATTAAGG	NA	False	NA	NA	False	NA	NA	NA	136494304	136556066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553009
ES.1467.45	chr1	+	3507	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58272	-1731	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	44.3867942072865	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTTGTTGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	136494366	136556060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.46	chr1	+	4816	4	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58265	-370	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	27.4388208363422	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTAATTCCCTTTTCCC	NA	False	NA	76	True	ATTAAA	-16	NA	136494373	136557421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553005
ES.1467.47	chr1	+	5377	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58260	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.3372625397925	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAACGTAGGAGCTTGCC	NA	False	NA	77	True	TATAAA	-1	NA	136494378	136557852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526661_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.48	chr1	+	5755	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58260	1	intron_retention	FALSE	canonical	3	42	junction_2	46.0506967012082	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATCACTTAGTCTCTG	NA	False	NA	17	True	AATAAA	-30	NA	136494378	136557792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553009
ES.1467.49	chr1	+	5177	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58260	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	57.5577005177317	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATCACTTAGTCTCT	NA	False	NA	16	True	AATAAA	-29	NA	136494378	136557791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553009
ES.1467.50	chr1	+	3686	4	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58260	-1725	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	25.6645020732269	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGCTAGGATTAAGG	NA	False	NA	NA	False	NA	NA	NA	136494378	136556066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552368_136552790_136553005
ES.1467.52	chr1	+	5228	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58259	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	44.3867942072865	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCACTTAGTCTCTGTG	NA	False	NA	19	True	AATAAA	-32	NA	136494379	136557794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.53	chr1	+	4935	3	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58258	-1731	intron_retention	FALSE	canonical	3	49	junction_1	47	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTTGTTGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	136494380	136556060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136552790_136553009
ES.1467.54	chr1	+	4115	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58254	-1732	intron_retention	FALSE	canonical	1	1	junction_2	57.6470944627741	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACTTTGTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	136494384	136556059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136504319_136504419_136551065_136551108_136552021_136552790_136553009
ES.1467.55	chr1	+	4115	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58253	-1730	intron_retention	FALSE	canonical	3	15	junction_1	52.694283371159	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTGTTGCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	136494385	136556061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552790_136553009
ES.1467.58	chr1	+	4015	4	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58246	-1729	intron_retention	FALSE	canonical	3	42	junction_2	12.3558353285671	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTTGCTAGGATT	NA	False	NA	NA	False	NA	NA	NA	136494392	136556062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553005
ES.1467.6	chr1	+	3766	21	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	15	7565	intron_retention	FALSE	canonical	3	49	junction_13	8.08006806902021	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394095	136431219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
ES.1467.60	chr1	+	5427	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58241	-11	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	51.2226512394663	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAGAAAGGAGATATC	NA	False	NA	5	True	AATAAA	-18	NA	136494397	136557780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136541903_136542135_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.61	chr1	+	3204	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58225	-1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.8439128834589	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTAAATGCAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	136494413	136555978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009_136553393_136553566
ES.1467.62	chr1	+	5799	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58220	-13	intron_retention	FALSE	canonical	3	15	junction_1	52.694283371159	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	False	NA	3	True	AATAAA	-16	NA	136494418	136557778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552790_136553009
ES.1467.63	chr1	+	9678	3	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	3051	intron_retention	FALSE	canonical	3	49	junction_1	47	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGAACTTGTGTTTA	NA	False	NA	26	True	AATAAA	-18	NA	136494419	136560842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136552790_136553009
ES.1467.64	chr1	+	3627	3	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58219	-1729	intron_retention	FALSE	canonical	1	5	junction_2	22	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTTGCTAGGATT	NA	False	NA	NA	False	NA	NA	NA	136494419	136556062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552598
ES.1467.65	chr1	+	3497	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.2613624009172	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494419	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552485_136552790_136553009
ES.1467.66	chr1	+	3486	6	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58219	-1801	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	20.7306536317599	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494419	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552071_136552598_136552790_136553005
ES.1467.67	chr1	+	3448	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.3352059629582	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494419	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552485_136552790_136553009
ES.1467.69	chr1	+	3634	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	-1733	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	60.045815840906	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAACTTTGTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	136494419	136556058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136541903_136542135_136551065_136551108_136552598_136552790_136553009
ES.1467.7	chr1	+	7254	30	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	26	1930	intron_retention	FALSE	non_canonical	0	0	junction_2	17.2604721870204	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394106	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399059_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456691_136456740
ES.1467.70	chr1	+	3724	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	-1740	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	56.3449199129788	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494419	136556051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552368_136552790_136553009
ES.1467.71	chr1	+	5370	7	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.1237100480907	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGGAGATATCACTT	NA	False	NA	9	True	AATAAA	-22	NA	136494421	136557784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136525022_136525119_136526570_136526669_136551065_136551108_136552021_136552071_136552598_136552790_136553009
ES.1467.72	chr1	+	6839	2	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-6	intron_retention	FALSE	canonical	3	49	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGGAGATATCACTTA	NA	False	NA	10	True	AATAAA	-23	NA	136494421	136557785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065
ES.1467.73	chr1	+	5291	6	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.0921444116807	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTTAGTCTCTGTGGA	NA	False	NA	21	True	AATAAA	-34	NA	136494421	136557796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136504319_136504419_136551065_136551108_136552021_136552071_136552598_136552790_136553005
ES.1467.74	chr1	+	5120	2	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-1725	intron_retention	FALSE	canonical	3	49	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGCTAGGATTAAGG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065
ES.1467.75	chr1	+	5462	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	56.3449199129788	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATCACTTAGTCTCT	NA	False	NA	16	True	AATAAA	-29	NA	136494421	136557791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552368_136552790_136553009
ES.1467.76	chr1	+	3422	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.7749833555186	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAACTTTGTTGCTAG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553037
ES.1467.77	chr1	+	5437	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-372	intron_retention	FALSE	canonical	3	15	junction_1	52.694283371159	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTAATTCCCTTTTC	NA	False	NA	74	True	ATTAAA	-14	NA	136494421	136557419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552790_136553009
ES.1467.78	chr1	+	3616	5	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7147817412476	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494421	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552368_136552790_136553005
ES.1467.79	chr1	+	4310	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1730	intron_retention	FALSE	canonical	1	3	junction_2	52.7128067930365	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTGTTGCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	136494421	136556061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136541903_136542135_136551065_136551108_136552021_136552790_136553009
ES.1467.8	chr1	+	7081	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	29	-1926	intron_retention	TRUE	canonical	0	0	junction_30	14.112602720815	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATCCAGGACCTTTCT	NA	False	NA	32	True	AATAAA	-23	NA	136394109	136457323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136456674_136456723
ES.1467.80	chr1	+	3431	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1801	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	57.0153488106492	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494421	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552598_136552790_136553009
ES.1467.83	chr1	+	3662	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1801	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	54.6699186024636	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136494421	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526669_136541903_136542135_136551065_136551108_136552598_136552790_136553009
ES.1467.84	chr1	+	4136	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1730	intron_retention	FALSE	canonical	0	0	junction_2	55.7628908863233	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTGTTGCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	136494421	136556061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136526570_136526726_136551065_136551108_136552021_136552790_136553009
ES.1467.85	chr1	+	4743	5	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-444	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	14.0423466699836	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTGTAAAACACTTCT	NA	False	NA	2	True	AATAAA	-14	NA	136494421	136557347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553005
ES.1467.86	chr1	+	3207	3	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-1740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.5	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136553005
ES.1467.87	chr1	+	7995	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	2284	intron_retention	FALSE	canonical	3	42	junction_2	46.0506967012082	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGTAATCCAGTACAA	NA	False	NA	NA	False	AATAAA	-12	NA	136494421	136560075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553009
ES.1467.88	chr1	+	4968	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.2613624009172	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAAGTGTAAAACACTTC	NA	False	NA	1	True	AATAAA	-13	NA	136494421	136557346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552368_136552790_136553009
ES.1467.89	chr1	+	3170	7	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.9956595259752	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTTGTTGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	136494421	136556060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009_136553166_136553273_136553393_136553566
ES.1467.9	chr1	+	5484	31	NNC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	29	1930	intron_retention	FALSE	canonical	0	0	junction_7	16.9291333374026	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCCTCCTAATCCAG	NA	False	NA	23	True	AATAAA	-14	NA	136394109	136457314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407516_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983_136455349_136457015
ES.1467.90	chr1	+	5920	3	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-58217	-11	intron_retention	FALSE	canonical	3	42	junction_2	3.5	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGAAGAAAGGAGATATC	NA	False	NA	5	True	AATAAA	-18	NA	136494421	136557780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021
ES.1467.92	chr1	+	4210	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1732	intron_retention	FALSE	canonical	1	4	junction_1	56.8611246811035	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACTTTGTTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136541903_136542135_136551065_136551108_136552021_136552790_136553009
ES.1467.93	chr1	+	5351	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58216	-12	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	56.1664193862015	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTGAAGAAAGGAGATAT	NA	False	NA	4	True	AATAAA	-17	NA	136494422	136557779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552368_136552790_136553009
ES.1467.94	chr1	+	5265	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58215	-444	intron_retention	FALSE	canonical	3	42	junction_2	46.0506967012082	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTGTAAAACACTTCT	NA	False	NA	2	True	AATAAA	-14	NA	136494423	136557347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553009
ES.1467.96	chr1	+	3531	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53831	-1731	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	58.9422386748247	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTTTGTTGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	136498807	136556060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136526570_136526669_136551065_136551108_136552598_136552790_136553009
ES.1467.97	chr1	+	5089	7	NNC	ENSMUSG00000041483.15	novel	4937	2	NA	NA	-53805	-431	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	25.556582104986	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCTGTTATAAAAGCAG	NA	False	NA	15	True	AATAAA	-27	NA	136498833	136557360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136526570_136526669_136541903_136542135_136551065_136551108_136552021_136552071_136552598_136552790_136553005
ES.1467.98	chr1	+	3532	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53803	-1801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.3548552522721	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAATAAAAC	NA	False	NA	NA	False	TTTAAA	-4	NA	136498835	136555990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136526570_136526669_136551065_136551108_136552598_136552790_136553009
ES.1467.99	chr1	+	4996	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-53803	-1730	intron_retention	FALSE	canonical	1	1	junction_1	66.9394419523265	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTGTTGCTAGGAT	NA	False	NA	NA	False	NA	NA	NA	136498835	136556061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136498957_136504319_136504419_136551065_136552790_136553009
ES.14670.1	chr17	-	408	1	Intergenic	novelGene_12281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	27298818	27298410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27298400_27298800
ES.14671.1	chr17	-	500	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	0	0	0	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGAACTCATTCAT	1947	False	NA	2	True	AATAAA	-24	NA	27352890	27341636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ES.14671.2	chr17	-	11221	1	NIC	ENSMUSG00000024208.17	novel	500	4	NA	NA	16	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTTTGGAACTCATT	1977	False	NA	-1	True	AATAAA	-21	NA	27352860	27341639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27341600_27352900
ES.14671.3	chr17	-	2770	3	NIC	ENSMUSG00000024208.17	novel	500	4	NA	NA	16	-1	intron_retention	FALSE	canonical	3	2777	junction_2	144.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCTGGTTTGGAACTC	1977	False	NA	-4	True	AATAAA	-18	NA	27352860	27341642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27344191_27344857_27344933_27352713
ES.14672.1	chr17	+	176	1	Intergenic	novelGene_12282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAAAACCAACCACCT	NA	False	NA	NA	False	NA	NA	NA	27366862	27367038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27366900_27367000
ES.14673.1	chr17	+	4785	2	Intergenic	novelGene_12285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGCCTGTAGAGGCTAG	-20	True	NA	NA	False	NA	NA	NA	27398139	27403076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27402325_27402476
ES.14673.2	chr17	+	3552	2	Intergenic	novelGene_12286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCCATCCTGTTAGATGT	-5	True	NA	NA	False	AATAAA	-18	NA	27398154	27401827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27398464_27398584
ES.14673.3	chr17	+	3639	1	Intergenic	novelGene_12287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCTCCATCCTGTTAGAT	27	False	NA	NA	False	AATAAA	-16	NA	27398186	27401825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27398200_27401800
ES.14673.4	chr17	+	4161	3	Intergenic	novelGene_12288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGCCTGTAGAGGCTAG	509	False	NA	NA	False	NA	NA	NA	27398722	27403076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27402150_27402190_27402325_27402476
ES.14674.1	chr17	-	2244	6	NNC	ENSMUSG00000024210.4	novel	2342	6	NA	NA	-11615	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.46969384566991	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTCTTTCTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-36	NA	27398384	27362944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27364297_27367444_27367621_27368894_27369071_27370018_27370218_27376510_27376788_27398320
ES.14674.2	chr17	-	339	1	Intergenic	novelGene_12283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	27396555	27396216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27396200_27396600
ES.14674.3	chr17	-	185	1	Intergenic	novelGene_12284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	27396563	27396378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27396400_27396600
ES.14675.1	chr17	+	2943	7	Genic_Genomic	ENSMUSG00000097090.2	novel	1650	2	NA	NA	-8977	45	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCAGTCCTCAGCTATT	NA	False	NA	NA	False	NA	NA	NA	27411028	27422090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_27412009_27412076_27412178_27412809_27412957_27414296_27414381_27415111_27415185_27418334_27418413_27420610
ES.14675.2	chr17	+	3920	2	NNC	ENSMUSG00000097090.2	novel	1650	2	NA	NA	-4985	45	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCAGTCCTCAGCTATT	NA	False	NA	NA	False	NA	NA	NA	27415020	27422090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27415185_27418334
ES.14676.1	chr17	+	1525	1	Antisense	novelGene_ENSMUSG00000044857.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAACTCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	27422656	27424181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27422700_27424200
ES.14676.2	chr17	+	1440	2	Antisense	novelGene_ENSMUSG00000044857.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTGAGACAGATTGATC	NA	False	NA	NA	False	NA	NA	NA	27422676	27424188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27423511_27423582
ES.14676.3	chr17	+	3171	2	Intergenic	novelGene_12289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAGTGGAAGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	27423848	27431054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27424119_27428153
ES.14677.1	chr17	-	4819	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	449	junction_5	60.8333286739351	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7999	False	NA	-1	True	AATAAA	-19	NA	27423437	27408573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.10	chr17	-	3337	8	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	42	-2	intron_retention	FALSE	canonical	3	14	junction_3	191.960136167776	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTTTATTTGTGGT	8035	False	NA	-3	True	AATAAA	-17	NA	27423401	27408575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412202_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.11	chr17	-	6112	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	51	-3	intron_retention	FALSE	canonical	3	449	junction_4	65.2856969191738	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGGTTTTATTTGTGG	8044	False	NA	-4	True	AATAAA	-16	NA	27423392	27408576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.12	chr17	-	3327	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	28	-3	intron_retention	FALSE	canonical	3	431	junction_6	64.6791137470362	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGGTTTTATTTGTGG	8021	False	NA	-4	True	AATAAA	-16	NA	27423415	27408576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.13	chr17	-	7039	6	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	17	-4	intron_retention	FALSE	canonical	3	21	junction_1	193.663006276367	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATGTGGTTTTATTTGTG	8010	False	NA	-5	True	AATAAA	-15	NA	27423426	27408577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27412205_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.14	chr17	-	4779	8	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	185.03590385189	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATGTGGTTTTATTTGTG	8004	False	NA	-5	True	AATAAA	-15	NA	27423432	27408577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27412009_27412076_27412205_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.15	chr17	-	5588	6	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	31	-5	intron_retention	FALSE	canonical	3	478	junction_5	30.4630924234556	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATGTGGTTTTATTTGT	8024	False	NA	-6	True	AATAAA	-14	NA	27423412	27408578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412179_27412811_27412958_27414298_27415187_27418336_27420652_27422632
ES.14677.16	chr17	-	5233	8	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	49	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	240.886119253434	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8042	False	NA	-7	True	AATAAA	-13	NA	27423394	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27411257_27411493_27412009_27412076_27412205_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.17	chr17	-	4760	8	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	33	-6	intron_retention	FALSE	canonical	1	2	junction_2	183.666401224545	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8026	False	NA	-7	True	AATAAA	-13	NA	27423410	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412102_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.18	chr17	-	9030	5	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	28	-6	intron_retention	FALSE	canonical	3	21	junction_2	236.95410948114	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8021	False	NA	-7	True	AATAAA	-13	NA	27423415	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27412009_27412076_27412205_27412811_27415187_27418336_27420652_27422632
ES.14677.19	chr17	-	2593	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	234.08371899814	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8021	False	NA	-7	True	AATAAA	-13	NA	27423415	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412950_27414294_27414379_27415109_27415187_27418332_27418413_27420610_27420652_27422632
ES.14677.2	chr17	-	6899	5	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	66	0	intron_retention	FALSE	canonical	3	478	junction_4	31.5386667441729	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	8059	False	NA	-1	True	AATAAA	-19	NA	27423377	27408573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412179_27412811_27415187_27418336_27420652_27422632
ES.14677.20	chr17	-	3809	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	63	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	183.381049661627	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8056	False	NA	-7	True	AATAAA	-13	NA	27423380	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27413047_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.21	chr17	-	4720	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	42	-6	combination_of_known_junctions	FALSE	canonical	3	431	junction_6	69.442091570118	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGATGTGGTTTTATTTG	8035	False	NA	-7	True	AATAAA	-13	NA	27423401	27408579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.22	chr17	-	3472	7	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	-27	-7	intron_retention	FALSE	canonical	3	21	junction_2	186.104585291891	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGATGTGGTTTTATTT	7966	False	NA	-8	True	AATAAA	-12	NA	27423470	27408580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412205_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.24	chr17	-	5435	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	56	-8	intron_retention	FALSE	canonical	3	431	junction_5	68.8064919417734	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGGATGTGGTTTTATT	8049	False	NA	-9	True	AATAAA	-11	NA	27423387	27408581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.25	chr17	-	2500	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	1	126	1	-126	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTCATTGCCGTGTGT	7994	False	NA	-2	True	NA	NA	NA	27423442	27408699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.26	chr17	-	6774	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	48	-144	intron_retention	FALSE	canonical	3	449	junction_4	64.7868299373672	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTCTCCGTGTAGCAGT	8041	False	NA	-20	True	AATAAA	-30	NA	27423395	27408717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.27	chr17	-	4666	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	13	-146	intron_retention	FALSE	canonical	3	449	junction_5	60.8333286739351	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGGTCTCCGTGTAGCA	8006	False	NA	-22	True	AATAAA	-28	NA	27423430	27408719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27420652_27422632
ES.14677.28	chr17	-	3194	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	18	-146	intron_retention	FALSE	canonical	3	431	junction_6	64.6791137470362	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGGTCTCCGTGTAGCA	8011	False	NA	-22	True	AATAAA	-28	NA	27423425	27408719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.29	chr17	-	2531	10	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	32	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.521578951801	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGGTCTCCGTGTAG	8025	False	NA	-24	True	AATAAA	-26	NA	27423411	27408721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412205_27412811_27412958_27413040_27413099_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.3	chr17	-	2633	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	-7	1	-7	-1	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	7986	False	NA	-2	True	AATAAA	-18	NA	27423450	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.30	chr17	-	2425	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	28	-148	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	171.844724606256	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGGTCTCCGTGTAG	8021	False	NA	-24	True	AATAAA	-26	NA	27423415	27408721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412102_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.31	chr17	-	7473	6	NIC	ENSMUSG00000044857.9	novel	2808	7	NA	NA	-84	-148	intron_retention	FALSE	canonical	3	511	junction_5	47.1440346173299	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGGTCTCCGTGTAG	7909	False	NA	-24	True	AATAAA	-26	NA	27423527	27408721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336
ES.14677.32	chr17	-	4557	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	63	-148	combination_of_known_junctions	FALSE	canonical	3	431	junction_6	69.442091570118	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGGTCTCCGTGTAG	8056	False	NA	-24	True	AATAAA	-26	NA	27423380	27408721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.33	chr17	-	3385	1	NIC	ENSMUSG00000044857.9	novel	2808	7	NA	NA	348	-148	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCGGTCTCCGTGTAG	NA	False	NA	-24	True	AATAAA	-26	NA	27412106	27408721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27408700_27412100
ES.14677.34	chr17	-	2509	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	28	-158	intron_retention	FALSE	canonical	3	431	junction_6	47.9846914363831	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTATGCTCATTTCGGT	8021	False	NA	-34	True	AATAAA	-16	NA	27423415	27408731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.35	chr17	-	2371	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	120	-159	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	179.58106630433	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTATGCTCATTTCGG	8113	False	NA	-35	True	AATAAA	-15	NA	27423323	27408732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412202_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.36	chr17	-	4602	8	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	32	-160	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	185.03590385189	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTATGCTCATTTCG	8025	False	NA	-36	True	AATAAA	-14	NA	27423411	27408733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27412009_27412076_27412205_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.37	chr17	-	3922	6	ISM	ENSMUSG00000044857.9	ENSMUST00000236082.2	2808	7	1875	161	1875	-161	3prime_fragment	FALSE	canonical	3	449	junction_5	64.3975154800245	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAGTATGCTCATTTC	8936	False	NA	-37	True	AATAAA	-13	NA	27417570	27408734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109
ES.14677.38	chr17	-	5361	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	34	-161	intron_retention	FALSE	canonical	3	478	junction_6	53.6151408963301	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAGTATGCTCATTTC	8027	False	NA	-37	True	AATAAA	-13	NA	27423409	27408734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27420652_27422632
ES.14677.39	chr17	-	1633	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	-41	-162	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	196.035502823715	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGCAGTATGCTCATTT	8745	False	NA	-38	True	AATAAA	-12	NA	27422691	27408735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.4	chr17	-	3380	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	45	-1	intron_retention	FALSE	canonical	3	431	junction_5	45.9044902185203	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	8038	False	NA	-2	True	AATAAA	-18	NA	27423398	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
ES.14677.5	chr17	-	5403	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	185.48770174866	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	8051	False	NA	-2	True	AATAAA	-18	NA	27423385	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27418022_27418336_27418413_27420610_27420652_27422632
ES.14677.6	chr17	-	5528	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	27	-1	intron_retention	FALSE	canonical	3	478	junction_6	53.6151408963301	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	8020	False	NA	-2	True	AATAAA	-18	NA	27423416	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27420652_27422632
ES.14677.7	chr17	-	5795	5	ISM	ENSMUSG00000044857.9	ENSMUST00000236082.2	2808	7	893	1	893	-1	intron_retention	FALSE	canonical	3	544	junction_3	43.6692111217961	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	7954	False	NA	-2	True	AATAAA	-18	NA	27418552	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298
ES.14677.8	chr17	-	4488	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	57	-1	intron_retention	FALSE	canonical	3	431	junction_6	65.5862451704285	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTTATTTGTGGTG	8843	False	NA	-2	True	AATAAA	-18	NA	27422593	27408574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610
ES.14677.9	chr17	-	2629	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	177.430091867191	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTTTATTTGTGGT	8015	False	NA	-3	True	AATAAA	-17	NA	27423421	27408575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27409765_27411905_27412009_27412076_27412205_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ES.14678.1	chr17	+	2561	3	Antisense	novelGene_ENSMUSG00000118503.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTCGTTATT	NA	False	NA	NA	False	NA	NA	NA	27431119	27442166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27431202_27431362_27431525_27439849
ES.14678.2	chr17	+	175	1	Intergenic	novelGene_12290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	27439153	27439328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27439200_27439300
ES.14679.1	chr17	+	3859	5	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	9.17877987534291	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27449562	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27449685_27453543_27456229_27456268_27457139_27457913_27457979_27458250
ES.14679.2	chr17	+	4662	3	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	9.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27449574	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27449685_27453543_27457979_27458250
ES.14679.3	chr17	+	2646	6	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	8.49941174435031	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27449607	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27449685_27453543_27453685_27454852_27456229_27456268_27457139_27457913_27457979_27458250
ES.14679.4	chr17	+	2480	5	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	9.02773504263389	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27449632	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27449685_27454852_27456242_27456281_27457139_27457913_27457979_27458250
ES.14679.5	chr17	+	3365	4	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	10.3387082795139	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27449634	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27449685_27453543_27453685_27454921_27457979_27458250
ES.14679.6	chr17	+	214	1	Intergenic	novelGene_12291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27450756	27450970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27450800_27451000
ES.14679.7	chr17	+	4972	2	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27453123	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27457979_27458250
ES.14679.8	chr17	+	4418	1	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTTCCATCTTC	NA	False	NA	4	True	AATAAA	-16	NA	27453949	27458367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27453900_27458400
ES.14679.9	chr17	+	2693	3	Antisense	novelGene_ENSMUSG00000117916.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	12	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTGTGTTCCATCTT	NA	False	NA	3	True	AATAAA	-15	NA	27455361	27458366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27456229_27456268_27457979_27458250
ES.1468.1	chr1	-	5604	7	Antisense	novelGene_ENSMUSG00000041498.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136426389	136409348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_136410241_136410659_136410777_136414008_136414181_136414770_136414919_136415139_136415203_136417934_136418120_136422362
ES.1468.2	chr1	-	1020	1	Antisense	novelGene_ENSMUSG00000041498.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	5151	False	NA	NA	False	NA	NA	NA	136410368	136409348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_136409300_136410400
ES.14680.1	chr17	-	3438	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-4	-1285	-4	1285	multi-exon	TRUE	canonical	3	72	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGGTCACTGTTT	6245	False	NA	NA	False	NA	NA	NA	27461637	27452763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27456112_27461547
ES.14680.10	chr17	-	2389	3	NIC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTCCGACTTGGGTT	6173	False	NA	-9	True	NA	NA	NA	27461709	27454048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27456112_27458358_27458523_27461547
ES.14680.11	chr17	-	1350	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-4	803	-4	-803	multi-exon	FALSE	canonical	3	72	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATAAGAGCTCGGTT	6245	False	NA	NA	False	NA	NA	NA	27461637	27454851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27456112_27461547
ES.14680.2	chr17	-	3579	3	NIC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	19	1285	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	3.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGGTCACTGTTT	6268	False	NA	NA	False	NA	NA	NA	27461614	27452763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27456112_27458358_27458523_27461547
ES.14680.3	chr17	-	2795	3	NNC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	1673	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3.5	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	7922	False	NA	-4	True	NA	NA	NA	27459960	27454043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27456112_27458358_27458523_27459397
ES.14680.4	chr17	-	2231	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	-77	-5	-77	5	multi-exon	FALSE	canonical	3	72	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	6172	False	NA	-4	True	NA	NA	NA	27461710	27454043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27456112_27461547
ES.14680.5	chr17	-	2255	2	NNC	ENSMUSG00000117916.2	novel	2149	2	NA	NA	154	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	6403	False	NA	-4	True	NA	NA	NA	27461479	27454043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27456112_27461292
ES.14680.6	chr17	-	2554	3	NNC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	6268	False	NA	-4	True	NA	NA	NA	27461614	27454043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27456112_27458358_27458523_27461292
ES.14680.7	chr17	-	2409	2	NNC	ENSMUSG00000117916.2	novel	2149	2	NA	NA	1895	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGACTTGGGTTTTTTT	8144	False	NA	-4	True	NA	NA	NA	27459738	27454043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27456112_27459397
ES.14680.9	chr17	-	2516	3	NNC	ENSMUSG00000117916.2	novel	2579	3	NA	NA	2981	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTCCGACTTGGGTT	9230	False	NA	-9	True	NA	NA	NA	27458652	27454048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27456112_27456689_27456849_27458358
ES.14681.1	chr17	-	4777	1	Intergenic	novelGene_12292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	27488692	27483915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27483900_27488700
ES.14682.1	chr17	+	6124	1	Intergenic	novelGene_12293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	27500858	27506982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27500900_27507000
ES.14683.1	chr17	-	640	4	Intergenic	novelGene_12294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATCTTGGCTACATTCC	NA	False	NA	NA	False	NA	NA	NA	27519771	27507352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27507568_27508898_27509083_27509556_27509639_27519612
ES.14684.1	chr17	-	2726	4	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCCCTGCAGAAAGTT	7521	False	NA	NA	False	NA	NA	NA	27548987	27543021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544476_27544829_27544999_27545787_27546728_27548824
ES.14684.2	chr17	-	1784	3	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATCCCTGCAGAAAG	7521	False	NA	NA	False	NA	NA	NA	27548987	27543023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544476_27544829_27544999_27548824
ES.14684.3	chr17	-	2525	5	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	6.60965203320114	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATCCCTGCAGAAAG	7516	False	NA	NA	False	NA	NA	NA	27548992	27543023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544476_27544829_27544999_27545783_27545977_27546183_27546723_27548820
ES.14684.4	chr17	-	2455	4	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.79869268479038	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7526	False	NA	NA	False	NA	NA	NA	27548982	27543051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544999_27545783_27545977_27546570_27546728_27548824
ES.14684.5	chr17	-	2314	3	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7510	False	NA	NA	False	NA	NA	NA	27548998	27543051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544999_27545783_27545977_27548824
ES.14684.6	chr17	-	2981	3	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	6	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7594	False	NA	NA	False	NA	NA	NA	27548914	27543051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544999_27545783_27546728_27548824
ES.14684.7	chr17	-	2364	5	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	5.24404424085076	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7516	False	NA	NA	False	NA	NA	NA	27548992	27543051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544476_27544829_27544999_27545783_27545977_27546317_27546728_27548824
ES.14684.8	chr17	-	2107	2	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	7524	False	NA	NA	False	NA	NA	NA	27548984	27543051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_27544999_27548824
ES.14685.1	chr17	-	169	1	Intergenic	novelGene_12295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	27599993	27599824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27599800_27600000
ES.14686.10	chr17	-	4289	3	ISM	ENSMUSG00000063239.18	ENSMUST00000231809.2	3298	9	65677	-336	35420	0	3prime_fragment	FALSE	canonical	3	22	junction_2	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCGGCCTGCGTGTCCA	NA	False	NA	-8	True	AATAAA	-18	NA	27656621	27644880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27645808_27650305_27650553_27653506
ES.14686.4	chr17	-	4643	11	FSM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	-42	6	-42	2	multi-exon	FALSE	canonical	2	4	junction_10	6.16116872029975	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCTGCGTGTCCACT	NA	False	NA	-6	True	AATAAA	-20	NA	27732422	27644878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620_27722508_27731765
ES.14686.6	chr17	-	4743	10	NNC	ENSMUSG00000063239.18	novel	4607	11	NA	NA	1793	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	8.65383665716478	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCTGCGTGTCCACT	8595	False	NA	-6	True	AATAAA	-20	NA	27720485	27644878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27670797_27670878_27671034_27673460_27673597_27691881_27692099_27720398
ES.14686.7	chr17	-	2084	8	NNC	ENSMUSG00000063239.18	novel	4607	11	NA	NA	495	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.66614336463034	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCTGCGTGTCCACT	7297	False	NA	-6	True	AATAAA	-20	NA	27721783	27644878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27645808_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673455_27673597_27691881_27692099_27721620
ES.14686.8	chr17	-	4374	10	NIC	ENSMUSG00000063239.18	novel	4607	11	NA	NA	10	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	8.41955396021006	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCTGCGTGTCCACT	NA	False	NA	-6	True	AATAAA	-20	NA	27732370	27644878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27721620_27722508_27731765
ES.14686.9	chr17	-	4586	13	NNC	ENSMUSG00000063239.18	novel	4607	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.49085817452189	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCGGCCTGCGTGTCCA	NA	False	NA	-8	True	AATAAA	-18	NA	27732373	27644880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670681_27670797_27670878_27671034_27673460_27673597_27691881_27692099_27721620_27722508_27731765_27732072_27732192
ES.14687.1	chr17	-	158	1	Intergenic	novelGene_12296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27762087	27761929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27761900_27762100
ES.14688.1	chr17	+	183	1	Antisense	novelGene_ENSMUSG00000116657.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTTTAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	27764513	27764696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_27764500_27764700
ES.14689.1	chr17	+	1754	6	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-1876	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2459.61024554705	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27773594	27782648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27773628_27773718_27773897_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.10	chr17	+	1758	6	FSM	ENSMUSG00000046711.17	ENSMUST00000231825.2	1717	6	-40	-1	1	0	multi-exon	FALSE	canonical	3	168	junction_1	2331.48484876055	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775548	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.11	chr17	+	1640	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	-2	-7	1	1	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAAGGAGCATTCAC	NA	False	NA	NA	False	AATAAA	-28	NA	27775556	27782649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.12	chr17	+	1710	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	-31	-649	1	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775556	27782648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.13	chr17	+	1673	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	-58	-698	1	0	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775556	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.14	chr17	+	2024	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	-20	-3	-1	2	multi-exon	FALSE	canonical	3	442	junction_1	2057.89800221002	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGTGTAAGGAGCATT	NA	False	NA	NA	False	AATAAA	-25	NA	27775557	27782646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.15	chr17	+	1781	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	88	-824	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775558	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.17	chr17	+	1598	5	NNC	ENSMUSG00000046711.17	novel	1631	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	2323.37588435449	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27775559	27782637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775686_27778533_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.19	chr17	+	1963	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	-60	-5	4	0	multi-exon	FALSE	canonical	3	442	junction_1	2173.91908485574	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27775581	27782642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.2	chr17	+	1584	6	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-1876	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2456.53495802523	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27773594	27782642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27773628_27773718_27773766_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.22	chr17	+	1375	6	FSM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	122	-452	4	264	multi-exon	FALSE	canonical	3	168	junction_1	2332.99755679255	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACGGTTGTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	27775592	27782272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.23	chr17	+	1634	5	NNC	ENSMUSG00000046711.17	novel	1681	5	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1939.53607532832	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTCTGGTGTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	27775594	27782639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775686_27778506_27778678_27779901_27779986_27780425_27780486_27781411
ES.14689.26	chr17	+	1352	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	13	-335	-5	-303	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCAGCGTCAGATGTTC	NA	False	NA	NA	False	NA	NA	NA	27775600	27782334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.27	chr17	+	2182	5	NIC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-5	1	intron_retention	FALSE	canonical	3	168	junction_1	2144.94211751739	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACAGTCTCTGGTGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	27775600	27782638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27775686_27775925_27776041_27778506_27778678_27779901_27780486_27781411
ES.14689.28	chr17	+	4407	4	NIC	ENSMUSG00000046711.17	novel	1898	5	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	2165	junction_1	1566.44501978205	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTCTGGTGTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	27775600	27782639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.29	chr17	+	4438	4	NIC	ENSMUSG00000046711.17	novel	2001	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	3635	junction_1	882.014739105872	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27775600	27782637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.3	chr17	+	1723	6	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-1874	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2472.28234633506	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27773596	27782642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27773628_27773718_27773874_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.30	chr17	+	2022	4	NIC	ENSMUSG00000046711.17	novel	1631	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2165	junction_2	1258.0249953355	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27775611	27782637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27775686_27778506_27778645_27779901_27780486_27781411
ES.14689.32	chr17	+	1580	6	NNC	ENSMUSG00000046711.17	novel	1030	5	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2255.93217983165	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGACAGTCTCTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	27775625	27782635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411_27781694_27781741
ES.14689.34	chr17	+	1697	6	NNC	ENSMUSG00000046711.17	novel	1717	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1975.87287040437	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27775625	27782642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780416_27780486_27781411
ES.14689.35	chr17	+	1250	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	12	-345	0	283	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTCCATGTTCATT	NA	False	NA	NA	False	NA	NA	NA	27775626	27782291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.36	chr17	+	1464	6	NNC	ENSMUSG00000046711.17	novel	1595	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2157.50513324998	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775626	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781414_27781748_27781845
ES.14689.37	chr17	+	1715	6	NIC	ENSMUSG00000046711.17	novel	1717	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	2357.85814670858	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTGGTGTAAGGA	NA	False	NA	NA	False	AATAAA	-20	NA	27775626	27782641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27775724_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.38	chr17	+	1548	5	NNC	ENSMUSG00000046711.17	novel	917	5	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2325.48559445119	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAACAAATAGCCTT	NA	False	NA	NA	False	GGGGCT	-32	NA	27775626	27782616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775724_27778533_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.39	chr17	+	2077	4	NIC	ENSMUSG00000046711.17	novel	1030	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1035	junction_1	1732.62966486077	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGACAGTCTCTGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	27775626	27782636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27775724_27778506_27778678_27779901_27780486_27781411
ES.14689.40	chr17	+	1624	5	NNC	ENSMUSG00000046711.17	novel	1030	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2226.4405449057	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGACAGTCTCTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	27775627	27782635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780490_27781417
ES.14689.41	chr17	+	1556	5	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	442	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2326.54082008032	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTCTGGTGTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	27776110	27782639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27776166_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.5	chr17	+	1899	5	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-918	0	at_least_one_novel_splicesite	FALSE	canonical	2	97	junction_1	2197.31500927837	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27774552	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27774913_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.6	chr17	+	1793	5	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-852	0	at_least_one_novel_splicesite	FALSE	canonical	2	97	junction_1	2292.54869086787	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27774618	27782637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27774913_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ES.14689.7	chr17	+	1705	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	-28	4	-28	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775519	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.8	chr17	+	1839	6	NIC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	2362.29292002495	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775538	27782644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27775724_27775925_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ES.14689.9	chr17	+	1643	5	NNC	ENSMUSG00000046711.17	novel	1681	5	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2064.34618886949	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAACAAATAGCCTT	NA	False	NA	NA	False	GGGGCT	-32	NA	27775547	27782616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781417
ES.1469.1	chr1	-	4540	2	Antisense	novelGene_ENSMUSG00000099337.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCCCCGCCCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	136440227	136428982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_136431176_136437880
ES.1469.2	chr1	-	4499	1	Antisense	novelGene_ENSMUSG00000041498.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCCCCGCCCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	136433481	136428982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_136429000_136433500
ES.14690.1	chr17	-	265	1	FSM	ENSMUSG00000116657.2	ENSMUST00000231483.2	10812	1	10	10537	10	-10537	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCAGCCCATGTCGAGG	2460	False	NA	NA	False	NA	NA	NA	27775482	27775217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27775200_27775500
ES.14691.2	chr17	-	640	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	24	198	-6	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784706	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
ES.14691.3	chr17	-	555	5	FSM	ENSMUSG00000062753.15	ENSMUST00000231753.2	563	5	10	-2	1	0	multi-exon	FALSE	canonical	2	17	junction_3	99.6092365195116	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784681	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783595_27783725_27784633
ES.14691.4	chr17	-	1805	2	ISM	ENSMUSG00000062753.15	ENSMUST00000080190.9	677	4	1	2	1	0	intron_retention	FALSE	canonical	3	267	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784681	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27782991_27783122
ES.14691.5	chr17	-	1172	4	NNC	ENSMUSG00000062753.15	novel	608	4	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	125.865007051205	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784675	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27782991_27783122_27783725_27784218_27784501_27784633
ES.14691.6	chr17	-	1461	1	NIC	ENSMUSG00000062753.15	novel	862	5	NA	NA	-108	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784205	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27782700_27784200
ES.14691.7	chr17	-	1008	5	FSM	ENSMUSG00000062753.15	ENSMUST00000145183.3	992	5	-18	2	-9	0	multi-exon	FALSE	canonical	0	0	junction_4	110.020452644043	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784659	27782744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784218
ES.14692.1	chr17	+	175	1	Intergenic	novelGene_12297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTTTTGG	NA	False	NA	NA	False	NA	NA	NA	27792358	27792533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27792400_27792500
ES.14693.1	chr17	+	176	1	Intergenic	novelGene_12298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	27792552	27792728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27792600_27792700
ES.14694.1	chr17	+	526	1	Intergenic	novelGene_12302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1998	False	NA	NA	False	NA	NA	NA	27827287	27827813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27827300_27827800
ES.14695.1	chr17	+	1086	1	FSM	ENSMUSG00000116571.2	ENSMUST00000231767.2	769	1	-613	296	-613	-296	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAATAAAAAAGG	1649	False	NA	NA	False	NA	NA	NA	27841857	27842943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27841900_27842900
ES.14696.1	chr17	-	2500	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	-280	3	-280	2	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTCTTTGTTCCATGT	NA	False	NA	-21	True	AATAAA	-20	NA	27842749	27798358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ES.14696.10	chr17	-	1200	5	NNC	ENSMUSG00000024213.15	novel	2223	5	NA	NA	6	181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.143424929556	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATCTGTCCTGTGCTG	NA	False	NA	41	True	ATTAAA	-27	NA	27842463	27799366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27799929_27800981_27801061_27802185_27802231_27815697_27815809_27842060
ES.14696.11	chr17	-	2168	1	Intergenic	novelGene_12299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATCCAAAAGTAACTT	9193	False	NA	NA	False	NA	NA	NA	27811455	27809287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27809300_27811500
ES.14696.12	chr17	-	1179	1	ISM	ENSMUSG00000024213.15	ENSMUST00000146321.3	1866	2	26927	12	879	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTATTATTTTTGGT	5338	False	NA	NA	False	AATAAA	-17	NA	27815310	27814131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27814100_27815300
ES.14696.13	chr17	-	172	1	Intergenic	novelGene_12300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAACTCTA	9385	False	NA	NA	False	NA	NA	NA	27816655	27816483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27816500_27816700
ES.14696.14	chr17	-	184	1	Intergenic	novelGene_12301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGAGCATGCTTATTA	1288	False	NA	NA	False	AATAAA	-29	NA	27825653	27825469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27825500_27825700
ES.14696.15	chr17	-	199	1	Intergenic	novelGene_12303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCGAGAAAGGTCATTG	NA	False	NA	NA	False	NA	NA	NA	27838497	27838298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_27838300_27838500
ES.14696.2	chr17	-	3139	3	NIC	ENSMUSG00000024213.15	novel	465	4	NA	NA	17	-4	intron_retention	FALSE	canonical	3	35	junction_2	161.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCTCTTTGTT	NA	False	NA	-27	True	AATAAA	-14	NA	27842452	27798364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27801067_27802185_27802231_27842060
ES.14696.3	chr17	-	1761	6	NIC	ENSMUSG00000024213.15	novel	1523	6	NA	NA	32	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	132.091786270002	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCTCTTTGTT	NA	False	NA	-27	True	AATAAA	-14	NA	27842437	27798364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27799329_27799749_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ES.14696.5	chr17	-	2049	5	FSM	ENSMUSG00000024213.15	ENSMUST00000114886.8	996	5	130	-1183	10	-4	multi-exon	FALSE	canonical	1	1	junction_4	152.175063660246	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCTCTTTGTT	NA	False	NA	-27	True	AATAAA	-14	NA	27841808	27798364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27841564
ES.14696.6	chr17	-	2074	4	NIC	ENSMUSG00000024213.15	novel	2223	5	NA	NA	29	-4	intron_retention	FALSE	canonical	3	35	junction_3	149.962217463822	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCTCTTTGTT	NA	False	NA	-27	True	AATAAA	-14	NA	27842440	27798364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27799929_27800981_27801067_27802185_27802231_27842060
ES.14696.8	chr17	-	2162	5	FSM	ENSMUSG00000024213.15	ENSMUST00000062397.13	558	5	-209	-1395	23	-6	multi-exon	FALSE	canonical	0	0	junction_1	148.79915154328	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAAGCTTTTGCTCTTTG	NA	False	NA	-29	True	AATAAA	-12	NA	27842446	27798366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27799902_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ES.14696.9	chr17	-	1517	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	-304	1010	-304	182	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTCCTGTGCTGT	NA	False	NA	42	True	ATTAAA	-28	NA	27842773	27799365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ES.14697.1	chr17	-	713	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	174	0	-127	0	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTATGTTCTGTAG	NA	False	NA	NA	False	AATAAA	-20	NA	27854345	27849391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ES.14697.10	chr17	-	792	7	NNC	ENSMUSG00000052146.17	novel	644	6	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2888.61273893811	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACATGTCCACTT	NA	False	NA	NA	False	AATAAA	-5	NA	27855642	27849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854679_27854838_27855538
ES.14697.14	chr17	-	607	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-54	-9	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	2377.01252836412	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACATGTCCACTT	NA	False	NA	NA	False	AATAAA	-5	NA	27854272	27849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853317_27853450_27854177
ES.14697.2	chr17	-	4695	2	NNC	ENSMUSG00000052146.17	novel	644	6	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	27854211	27849397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27851871_27851989
ES.14697.3	chr17	-	2326	4	FSM	ENSMUSG00000052146.17	ENSMUST00000145226.9	753	4	-45	-1528	-30	0	multi-exon	FALSE	canonical	3	4719	junction_3	899.266738329994	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	27854248	27849397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27851331_27853045_27853218_27853299_27853450_27854177
ES.14697.4	chr17	-	588	6	NIC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-322	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	2477.32772155805	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGTCCACTTGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	27853771	27849402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27853717
ES.14697.7	chr17	-	551	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2268.66078557373	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACATGTCCACTT	NA	False	NA	NA	False	AATAAA	-5	NA	27854214	27849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27849481_27850173_27850230_27851252_27851315_27853045_27853218_27853299_27853450_27854177
ES.14697.8	chr17	-	4694	2	ISM	ENSMUSG00000052146.17	ENSMUST00000152982.3	822	3	36	-3640	20	-9	intron_retention	FALSE	canonical	3	6238	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACATGTCCACTT	NA	False	NA	NA	False	AATAAA	-5	NA	27854182	27849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_27853218_27853299
ES.14697.9	chr17	-	1721	5	NIC	ENSMUSG00000052146.17	novel	712	5	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	22	junction_4	2769.60877201095	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACATGTCCACTT	NA	False	NA	NA	False	AATAAA	-5	NA	27854215	27849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27853717
ES.14698.1	chr17	+	177	1	Intergenic	novelGene_12304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATTAAA	1674	False	NA	NA	False	NA	NA	NA	27858917	27859094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27858900_27859100
ES.14699.1	chr17	+	4112	10	FSM	ENSMUSG00000040276.16	ENSMUST00000045896.11	4176	10	18	46	18	-46	multi-exon	TRUE	canonical	0	0	junction_1	19.6078845315467	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTGACCGTATGG	NA	False	NA	NA	False	TTTAAA	-38	NA	27874539	27930039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27874734_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
ES.14699.2	chr17	+	174	1	Intergenic	novelGene_12305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTGAATTGTA	NA	False	NA	NA	False	NA	NA	NA	27879666	27879840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27879700_27879800
ES.14699.3	chr17	+	204	1	Intergenic	novelGene_12306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGCCAGCCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	27882409	27882613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27882400_27882600
ES.14699.4	chr17	+	180	1	Intergenic	novelGene_12307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATTTGGGGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	27893581	27893761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27893600_27893800
ES.14699.5	chr17	+	4119	10	FSM	ENSMUSG00000040276.16	ENSMUST00000231669.2	4209	10	46	44	0	-44	multi-exon	FALSE	canonical	1	1	junction_1	19.4193488848393	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGACCGTATGGCT	NA	False	NA	NA	False	TTTAAA	-40	NA	27904200	27930041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27904400_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
ES.14699.6	chr17	+	1736	10	FSM	ENSMUSG00000040276.16	ENSMUST00000231669.2	4209	10	46	2427	0	7	multi-exon	FALSE	canonical	1	1	junction_1	19.4193488848393	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAAGAGACAGCGTTTGC	NA	False	NA	NA	False	TTTAAA	-37	NA	27904200	27927658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_27904400_27920799_27920916_27921673_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
ES.14699.7	chr17	+	1411	8	ISM	ENSMUSG00000040276.16	ENSMUST00000097360.3	1800	10	17481	7	-1779	-4	3prime_fragment	FALSE	canonical	3	26	junction_1	11.2866184086307	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAGAACAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	27921651	27927626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
ES.14699.8	chr17	+	2310	7	NIC	ENSMUSG00000040276.16	novel	1857	10	NA	NA	-1777	-4	intron_retention	FALSE	canonical	3	26	junction_1	10.1159939369957	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAGAACAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	27921653	27927626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_27921831_27923818_27924055_27924598_27924755_27924890_27926089_27926192_27926321_27926853_27927042_27927399
ES.14699.9	chr17	+	3415	6	ISM	ENSMUSG00000040276.16	ENSMUST00000231350.2	1368	8	1166	-2377	-26	-42	3prime_fragment	FALSE	canonical	3	35	junction_1	8.46167832052247	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGACCGTATGGCTGT	NA	False	NA	NA	False	TTTAAA	-42	NA	27924596	27930043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_27924755_27924890_27925067_27925967_27926089_27926192_27926321_27926853_27927042_27927399
ES.147.1	chr1	-	2774	13	FSM	ENSMUSG00000025920.20	ENSMUST00000027052.13	2763	13	-5	-6	-4	0	multi-exon	TRUE	canonical	0	0	junction_2	35.7596140918774	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTTCCTTCAGTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	16589535	16299027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ES.147.10	chr1	-	3416	13	NNC	ENSMUSG00000025920.20	novel	2214	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	36.4504991582953	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTGCTCATTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	16589538	16414421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16561464_16561619_16579565_16579633_16589396
ES.147.11	chr1	-	3254	12	NNC	ENSMUSG00000025920.20	novel	3907	12	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	37.1220902802746	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCACTGCTCATTTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	16589508	16414422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16561464_16561619_16579565_16579633_16589396
ES.147.12	chr1	-	3062	11	ISM	ENSMUSG00000025920.20	ENSMUST00000162435.8	2735	13	32	115389	0	-7	5prime_fragment	FALSE	canonical	1	4	junction_10	29.4591242232352	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACCCACTGCTCAT	NA	False	NA	NA	False	AATAAA	-9	NA	16590304	16414428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16590224
ES.147.14	chr1	-	3170	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-68	805	-8	0	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGATTCATATAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16589539	16414514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ES.147.15	chr1	-	2691	9	NIC	ENSMUSG00000025920.20	novel	3081	12	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	33.3644646293028	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTTTGATTCATATA	NA	False	NA	NA	False	AATAAA	-14	NA	16589491	16414518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16579565_16579633_16589396
ES.147.18	chr1	-	2983	12	NNC	ENSMUSG00000025920.20	novel	3081	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	29.3127902019151	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGACTTTGATTCA	NA	False	NA	NA	False	AATAAA	-10	NA	16589556	16414522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396_16589432_16589496
ES.147.19	chr1	-	1760	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-13	2160	0	-52	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTGTCCACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	16589484	16415869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ES.147.2	chr1	-	2623	12	NIC	ENSMUSG00000025920.20	novel	2763	13	NA	NA	3	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	29.3127902019151	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTTGTTCCTTCAGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	16589474	16299028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16300091_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ES.147.20	chr1	-	128	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	16422470	16422342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16422300_16422500
ES.147.21	chr1	-	1066	4	NIC	ENSMUSG00000025920.20	novel	1151	5	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	38.8529993122224	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTTTTGTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	16589535	16529943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16530644_16533258_16533419_16579565_16579633_16589396
ES.147.22	chr1	-	1186	5	FSM	ENSMUSG00000025920.20	ENSMUST00000115359.10	1151	5	-41	6	5	-6	multi-exon	FALSE	canonical	2	3	junction_1	33.2217925464596	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTTTTGTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	16589525	16529944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16530644_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ES.147.3	chr1	-	1663	9	ISM	ENSMUSG00000025920.20	ENSMUST00000162627.8	2773	14	125065	562	-18768	-550	3prime_fragment	FALSE	canonical	0	0	junction_2	42.1870833312757	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGATGTGCTGTGGA	NA	False	NA	NA	False	NA	NA	NA	16464387	16299589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274
ES.147.4	chr1	-	4033	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-20	-1049	0	165	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATAAATCAGAGTGT	NA	False	NA	NA	False	AATAAA	-33	NA	16589484	16413465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ES.147.5	chr1	-	4201	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-68	-226	-8	147	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCTCTTAACAAAACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	16589539	16413483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ES.147.6	chr1	-	3855	12	NNC	ENSMUSG00000025920.20	novel	3907	12	NA	NA	1	5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_9	37.1220902802746	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTTTTCATCTCATTCC	NA	False	NA	NA	False	AATAAA	-21	NA	16589476	16413789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16561464_16561619_16579565_16579633_16589396
ES.147.7	chr1	-	3714	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-32	-718	-2	-2	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCAGTAGCTTTTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	16589496	16413796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ES.147.8	chr1	-	3862	12	NNC	ENSMUSG00000025920.20	novel	3907	12	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	30.8694933524137	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCAGTAGCTTTTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	16589498	16413796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556390_16579565_16579633_16589396
ES.147.9	chr1	-	3133	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	-76	-93	-9	0	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTGCTCATTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	16589540	16414421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ES.1470.1	chr1	-	160	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136466688	136466528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136466500_136466700
ES.14700.1	chr17	+	1415	1	Intergenic	novelGene_12308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27997380	27998795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_27997400_27998800
ES.14701.1	chr17	+	180	1	Intergenic	novelGene_12309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28021505	28021685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28021500_28021700
ES.14701.2	chr17	+	713	1	Intergenic	novelGene_12310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGCCTCTATAGAAC	NA	False	NA	NA	False	NA	NA	NA	28021506	28022219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28021500_28022200
ES.14702.1	chr17	+	175	1	Intergenic	novelGene_12311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGAGCAGGCAGGGCC	9672	False	NA	NA	False	NA	NA	NA	28031855	28032030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28031900_28032000
ES.14703.1	chr17	-	3231	1	NIC	ENSMUSG00000056692.14	novel	3892	5	NA	NA	65986	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGTGCGTGTGATTC	NA	False	NA	-2	True	ATTAAA	-33	NA	27973440	27970209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_27970200_27973400
ES.14703.2	chr17	-	3929	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	-38	1	-15	-1	multi-exon	FALSE	canonical	3	33	junction_4	5.43139024560011	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGTGCGTGTGATTC	NA	False	NA	-2	True	ATTAAA	-33	NA	28039637	27970209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
ES.14703.4	chr17	-	3498	4	FSM	ENSMUSG00000056692.14	ENSMUST00000233508.2	1348	4	-114	-2036	0	5	multi-exon	FALSE	canonical	2	6	junction_1	17.3781471969828	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTATCCTGTGTGCGTGT	NA	False	NA	-7	True	ATTAAA	-28	NA	28039540	27970214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27972970_28005044_28005243_28012882_28013038_28039150
ES.14703.5	chr17	-	3570	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114859.9	3573	5	3	0	3	0	multi-exon	FALSE	canonical	2	6	junction_1	15.5463018110418	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	-12	True	ATTAAA	-23	NA	28039513	27970219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27972970_27987109_27987214_28005044_28005243_28012882_28013038_28039150
ES.14703.6	chr17	-	3698	6	NNC	ENSMUSG00000056692.14	novel	3892	5	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	16.7212439728628	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	-12	True	ATTAAA	-23	NA	28039595	27970219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150_28039403_28039581
ES.14703.7	chr17	-	1117	4	FSM	ENSMUSG00000056692.14	ENSMUST00000233508.2	1348	4	-96	327	-6	-327	multi-exon	FALSE	canonical	2	6	junction_1	17.3781471969828	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGGTTGTAGTTTTGAG	NA	False	NA	-4	True	TTTAAA	-20	NA	28039522	27972577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_27972970_28005044_28005243_28012882_28013038_28039150
ES.14704.1	chr17	+	1212	7	NNC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-14817	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	753.440055124936	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCCCTTGCATCTCC	1483	False	NA	26	True	AATAAA	-28	NA	28042306	28070947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28042640_28058947_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ES.14704.2	chr17	+	957	7	NNC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-12733	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	751.980588549702	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGTGTCCCTGTC	1950	False	NA	14	True	AATAAA	-16	NA	28044390	28070935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28044481_28058947_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ES.14704.3	chr17	+	721	6	NNC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	810.279852890346	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTCCCTGTCCCTT	NA	False	NA	18	True	AATAAA	-20	NA	28059087	28070939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066936_28067032_28070611
ES.14704.4	chr17	+	2787	4	NIC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-20	0	intron_retention	FALSE	canonical	3	1970	junction_2	61.2263559806287	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTCCCTGTCCCTT	NA	False	NA	18	True	AATAAA	-20	NA	28059088	28070939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28061353_28064156_28064247_28066926_28067032_28070611
ES.14704.5	chr17	+	764	6	NNC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	811.755529700907	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTCCCTGTCCCTT	NA	False	NA	18	True	AATAAA	-20	NA	28059090	28070939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28059180_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ES.14704.6	chr17	+	645	6	NNC	ENSMUSG00000024217.11	novel	758	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	804.81411518437	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGTGTCCCTGTCCC	NA	False	NA	16	True	AATAAA	-18	NA	28059090	28070937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28066983_28070643
ES.14704.7	chr17	+	1355	2	ISM	ENSMUSG00000024217.11	ENSMUST00000233752.2	1013	6	-18	10203	-18	-10198	5prime_fragment	FALSE	canonical	3	1664	junction_1	0	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACATGAGGACATTGA	NA	False	NA	NA	False	NA	NA	NA	28059090	28060739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28059144_28059437
ES.14705.1	chr17	-	175	1	Intergenic	novelGene_12312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAGCGAGCAGAGATC	8275	False	NA	NA	False	NA	NA	NA	28072458	28072283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28072300_28072500
ES.14706.1	chr17	+	4979	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	-31	3686	-31	-868	multi-exon	TRUE	canonical	3	66	junction_6	13.1601671721905	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCGTGTCCTGGCGCTT	5754	False	NA	45	True	NA	NA	NA	28075383	28115329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.10	chr17	+	9226	19	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	20	-2	intron_retention	FALSE	canonical	1	1	junction_9	23.3782636197931	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTCCTCGTGTGTCTG	5805	False	NA	NA	False	ATTAAA	-14	NA	28075434	28119013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104433_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.11	chr17	+	8608	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_1	22.2438755616012	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5805	False	NA	NA	False	ATTAAA	-16	NA	28075434	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095642_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.12	chr17	+	7969	16	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	40	-2	intron_retention	FALSE	canonical	0	0	junction_1	31.2456930365344	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTCCTCGTGTGTCTG	5825	False	NA	NA	False	ATTAAA	-14	NA	28075454	28119013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112269_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.13	chr17	+	5140	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	43	3451	43	-633	multi-exon	FALSE	canonical	3	66	junction_6	13.1601671721905	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTGTGTGAGAATTGG	5828	False	NA	NA	False	NA	NA	NA	28075457	28115564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.15	chr17	+	8212	22	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.8030814455607	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTCCTCGTGTGTCTG	5838	False	NA	NA	False	ATTAAA	-14	NA	28075467	28119013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104964_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855_28114949_28115225
ES.14706.17	chr17	+	4876	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	54	-880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	22.4285532302019	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATCCTGTGTCCTGCGT	5839	False	NA	33	True	NA	NA	NA	28075468	28115317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113526_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.18	chr17	+	8798	20	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	54	0	intron_retention	FALSE	canonical	0	0	junction_11	23.0378467368691	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5839	False	NA	NA	False	ATTAAA	-16	NA	28075468	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104380_28104523_28104964_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.19	chr17	+	5235	23	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	54	-880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3320328257159	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATCCTGTGTCCTGCGT	5839	False	NA	33	True	NA	NA	NA	28075468	28115317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28097442_28097624_28097739_28097912_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.2	chr17	+	8959	20	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	-4	9	intron_retention	FALSE	canonical	0	0	junction_6	22.9009670893788	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTGTTATATGGGTT	5781	False	NA	NA	False	ATTAAA	-25	NA	28075410	28119024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098770_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.20	chr17	+	8608	20	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	54	-4	intron_retention	FALSE	canonical	0	0	junction_9	23.057918163349	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGCTCCTCGTGTGTC	5839	False	NA	NA	False	ATTAAA	-12	NA	28075468	28119011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103513_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.21	chr17	+	6993	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	54	-1395	intron_retention	FALSE	canonical	1	2	junction_18	22.0985859276108	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGTGGATGTCCAG	5839	False	NA	NA	False	AATAAA	-26	NA	28075468	28117620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113592_28114243_28114353_28114433_28114535_28114855
ES.14706.23	chr17	+	8479	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	62	-3	intron_retention	FALSE	canonical	0	0	junction_12	22.4550105767065	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGCTCCTCGTGTGTCT	5847	False	NA	NA	False	ATTAAA	-13	NA	28075476	28119012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104964_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.24	chr17	+	7080	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	64	-1400	intron_retention	FALSE	canonical	0	0	junction_12	22.4550105767065	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTGGCTGTGTGGATG	5849	False	NA	NA	False	AATAAA	-21	NA	28075478	28117615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104964_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.25	chr17	+	8360	21	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	81	-1	intron_retention	FALSE	canonical	1	2	junction_18	22.0985859276108	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCCTCGTGTGTCTGT	5866	False	NA	NA	False	ATTAAA	-15	NA	28075495	28119014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113592_28114243_28114353_28114433_28114535_28114855
ES.14706.27	chr17	+	8672	19	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	132	-1	intron_retention	FALSE	canonical	1	1	junction_10	22.5339250415408	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCCTCGTGTGTCTGT	6082	False	NA	NA	False	ATTAAA	-15	NA	28075711	28119014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104433_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114535_28114855
ES.14706.28	chr17	+	8403	21	NIC	ENSMUSG00000039512.13	novel	657	6	NA	NA	-61	0	intron_retention	FALSE	canonical	1	3	junction_1	21.7137629166388	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	6526	False	NA	NA	False	ATTAAA	-16	NA	28076155	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28076279_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.29	chr17	+	5364	21	NIC	ENSMUSG00000039512.13	novel	657	6	NA	NA	-60	-220	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	21.7137629166388	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCCATGACCGGTCACT	6527	False	NA	NA	False	NA	NA	NA	28076156	28115977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28076279_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.3	chr17	+	8756	20	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_10	27.3562726073844	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5793	False	NA	NA	False	ATTAAA	-16	NA	28075422	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075644_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104433_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.30	chr17	+	8877	18	NIC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	-13366	6	intron_retention	FALSE	canonical	3	66	junction_4	13.9124797726935	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGTGTCTGTTATATGG	NA	False	NA	NA	False	ATTAAA	-22	NA	28095712	28119021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28095800_28095897_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.31	chr17	+	8171	15	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	-10518	0	intron_retention	FALSE	canonical	0	0	junction_2	26.248129185035	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	543	False	NA	NA	False	ATTAAA	-16	NA	28098560	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28098766_28099108_28099280_28100399_28100590_28102994_28103082_28103407_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.32	chr17	+	4110	16	ISM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	23208	3688	-10456	-870	3prime_fragment	FALSE	canonical	3	66	junction_1	14.4631332090326	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGCGTGTCCTGGCGC	605	False	NA	43	True	NA	NA	NA	28098622	28115327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.33	chr17	+	4406	8	ISM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	30935	1044	-2729	-1044	3prime_fragment	FALSE	canonical	3	83	junction_2	9.05087660654695	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTGTGCTGTGGACTG	8332	False	NA	NA	False	NA	NA	NA	28106349	28117971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.34	chr17	+	6395	8	NNC	ENSMUSG00000039512.13	novel	817	6	NA	NA	-1508	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	34.9833779771748	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGCTCCTCGTGTGTCT	9553	False	NA	NA	False	ATTAAA	-13	NA	28107570	28119012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28107758_28107895_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.35	chr17	+	5018	3	NIC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	-73	0	intron_retention	FALSE	canonical	3	107	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	28113595	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28114353_28114433_28114535_28114855
ES.14706.36	chr17	+	4021	3	NNC	ENSMUSG00000039512.13	novel	594	5	NA	NA	822	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGCTCCTCGTGTGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	28114490	28119012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28114535_28114855_28115606_28115785
ES.14706.37	chr17	+	3643	2	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	1649	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCCTCGTGTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	28115317	28119014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28115732_28115785
ES.14706.4	chr17	+	8626	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	8	0	8	0	multi-exon	FALSE	canonical	3	66	junction_6	13.1601671721905	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5793	False	NA	NA	False	ATTAAA	-16	NA	28075422	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.5	chr17	+	5812	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	8	2814	8	4	multi-exon	FALSE	canonical	3	66	junction_6	13.1601671721905	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCCTTGTAGGTTTC	5793	False	NA	NA	False	TTTAAA	-33	NA	28075422	28116201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.6	chr17	+	7230	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	9	1395	9	-1395	multi-exon	FALSE	canonical	3	66	junction_6	13.1601671721905	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGTGGATGTCCAG	5794	False	NA	NA	False	AATAAA	-26	NA	28075423	28117620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14706.7	chr17	+	8876	20	NNC	ENSMUSG00000039512.13	novel	8634	21	NA	NA	13	0	intron_retention	FALSE	canonical	1	1	junction_10	22.8066666639676	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTCGTGTGTCTGTT	5798	False	NA	NA	False	ATTAAA	-16	NA	28075427	28119015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28104027_28104433_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ES.14707.1	chr17	+	1222	3	NNC	ENSMUSG00000024219.17	novel	819	2	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTATGAGGTCGGTCC	4216	False	NA	NA	False	NA	NA	NA	28128256	28132773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28131160_28131318_28132072
ES.14707.10	chr17	+	6045	21	NNC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_1	13.6033084211158	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTTTGAATTATAAAC	4238	False	NA	16	True	CATAAA	-17	NA	28128278	28281575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128412_28204300_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.11	chr17	+	5644	25	FSM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	-1	176	-1	0	multi-exon	FALSE	canonical	2	10	junction_3	13.4574948139194	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4238	False	NA	14	True	CATAAA	-15	NA	28128278	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.12	chr17	+	5853	25	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	11.2395012740285	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4241	False	NA	12	True	AATAAA	-21	NA	28128281	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.13	chr17	+	3148	9	NIC	ENSMUSG00000024219.17	novel	5717	24	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.9868375460475	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4243	False	NA	14	True	CATAAA	-15	NA	28128283	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.15	chr17	+	5465	23	NIC	ENSMUSG00000024219.17	novel	5717	24	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	12.8256747925518	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATTTTGTTTGAATTAT	4253	False	NA	12	True	CATAAA	-13	NA	28128293	28281571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.16	chr17	+	4983	23	NIC	ENSMUSG00000024219.17	novel	5717	24	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	12.9129315669561	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTTTGAATTATAAAC	4254	False	NA	16	True	CATAAA	-17	NA	28128294	28281575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.17	chr17	+	5744	24	NIC	ENSMUSG00000024219.17	novel	5717	24	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	14.92565064776	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATAGCTCTGGGGTCTC	4254	False	NA	9	True	AATAAA	-18	NA	28128294	28281746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.18	chr17	+	5699	25	NIC	ENSMUSG00000024219.17	novel	6846	25	NA	NA	4	35	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	11.2395012740285	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAACCAACCTGTGCA	4254	False	NA	49	True	TATAAA	-15	NA	28128294	28281608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.19	chr17	+	5800	25	FSM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	19	0	8	0	multi-exon	FALSE	canonical	2	10	junction_3	13.4574948139194	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4258	False	NA	12	True	AATAAA	-21	NA	28128298	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.2	chr17	+	5728	24	NNC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0127173509011	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4216	False	NA	12	True	AATAAA	-21	NA	28128256	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28193878_28193960_28195534_28195641_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.20	chr17	+	1024	2	NNC	ENSMUSG00000024219.17	novel	819	2	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGAGGTCGGTCCTT	4259	False	NA	NA	False	NA	NA	NA	28128299	28132775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28132072
ES.14707.21	chr17	+	6730	23	ISM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-7	164	-7	0	intron_retention	FALSE	canonical	3	31	junction_22	7.69686530590149	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4259	False	NA	14	True	CATAAA	-15	NA	28128299	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.22	chr17	+	5895	26	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	15.1100496359211	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATAGCTCTGGGGTCTCT	4260	False	NA	10	True	AATAAA	-19	NA	28128300	28281747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.23	chr17	+	1356	7	ISM	ENSMUSG00000024219.17	ENSMUST00000088027.7	6838	24	13	75529	-3	10239	5prime_fragment	FALSE	canonical	3	39	junction_4	6.71854812358212	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATTCCAGCACTTGAA	4263	False	NA	NA	False	ATTAAA	-18	NA	28128303	28206044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718
ES.14707.24	chr17	+	6536	26	NNC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.8007618874859	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4271	False	NA	12	True	AATAAA	-21	NA	28128311	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28132072_28132786_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.25	chr17	+	7035	24	NNC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_23	13.839479431188	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCTCTGGGGTCTCTG	4276	False	NA	11	True	AATAAA	-20	NA	28128316	28281748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277869_28278267
ES.14707.26	chr17	+	6887	23	ISM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	12	-12	12	0	intron_retention	FALSE	canonical	3	31	junction_22	7.69686530590149	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4278	False	NA	12	True	AATAAA	-21	NA	28128318	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.28	chr17	+	6869	25	FSM	ENSMUSG00000024219.17	ENSMUST00000025058.15	6846	25	-25	2	14	0	multi-exon	FALSE	canonical	2	10	junction_3	15.385272088014	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATTTTGTTTGAATTAT	4280	False	NA	12	True	CATAAA	-13	NA	28128320	28281571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.3	chr17	+	5636	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-45	126	-18	38	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACCAACCTGTGCATCA	4221	False	NA	52	True	TATAAA	-18	NA	28128261	28281611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.30	chr17	+	6762	24	ISM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	51	176	-8	0	intron_retention	FALSE	canonical	2	10	junction_3	13.6715453815248	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4290	False	NA	14	True	CATAAA	-15	NA	28128330	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.31	chr17	+	2829	12	NNC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	-7	-20369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.4689772188838	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAAACATTTTTCTCC	4291	False	NA	NA	False	NA	NA	NA	28128331	28250118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28249388
ES.14707.32	chr17	+	5433	24	NNC	ENSMUSG00000024219.17	novel	5717	24	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	16.0594359191594	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATTTTGTTTGAATTAT	4399	False	NA	12	True	CATAAA	-13	NA	28128439	28281571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261532_28261655_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.33	chr17	+	1472	5	ISM	ENSMUSG00000024219.17	ENSMUST00000025058.15	6846	25	121	76517	-65	9251	5prime_fragment	FALSE	canonical	2	10	junction_3	22.8295313136297	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	4426	False	NA	NA	False	NA	NA	NA	28128466	28205056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039
ES.14707.34	chr17	+	6672	23	NIC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_13	15.0294476784964	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCTCTGGGGTCTCTG	4492	False	NA	11	True	AATAAA	-20	NA	28128532	28281748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.35	chr17	+	4727	23	NNC	ENSMUSG00000024219.17	novel	4485	11	NA	NA	569	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4334369880336	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTTTGAATTATAAAC	5060	False	NA	16	True	CATAAA	-17	NA	28129100	28281575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28129171_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.36	chr17	+	5330	24	NNC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	27059	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.9673138596033	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATTTTGTTTGAATTATA	8048	False	NA	13	True	CATAAA	-14	NA	28155590	28281572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28155683_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.37	chr17	+	171	1	Intergenic	novelGene_12313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAGAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	28175723	28175894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28175700_28175900
ES.14707.38	chr17	+	4036	1	Antisense	novelGene_ENSMUSG00000085846.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAATGTAAATACCTGT	NA	False	NA	NA	False	NA	NA	NA	28176422	28180458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28176400_28180500
ES.14707.39	chr17	+	6174	20	ISM	ENSMUSG00000024219.17	ENSMUST00000025058.15	6846	25	76849	-170	-21124	6	3prime_fragment	FALSE	canonical	3	18	junction_19	12.0089993955364	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCATAGCTCTGGGGT	NA	False	NA	6	True	AATAAA	-15	NA	28205194	28281743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.4	chr17	+	5797	26	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	-17	38	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	15.1100496359211	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACCAACCTGTGCATCA	4222	False	NA	52	True	TATAAA	-18	NA	28128262	28281611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.40	chr17	+	7304	18	NNC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	-21102	0	intron_retention	FALSE	canonical	0	0	junction_3	15.6083111566444	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	NA	False	NA	14	True	CATAAA	-15	NA	28205216	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28205302_28205524_28205627_28205718_28205890_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721
ES.14707.41	chr17	+	4887	20	ISM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	76910	-10	-21102	-2	3prime_fragment	FALSE	canonical	3	31	junction_18	7.88244657380687	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATAGCTCTGGGGTCTCT	NA	False	NA	10	True	AATAAA	-19	NA	28205216	28281747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.42	chr17	+	5404	14	NNC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	-15988	0	intron_retention	FALSE	canonical	0	0	junction_5	20.1021062218916	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	2005	False	NA	12	True	AATAAA	-21	NA	28210330	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28270470_28270624_28270698_28270807_28271633_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.43	chr17	+	5385	15	NNC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	-7291	0	intron_retention	TRUE	canonical	0	0	junction_1	18.5681315754731	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	812	False	NA	14	True	CATAAA	-15	NA	28219027	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28219131_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.44	chr17	+	4289	15	NNC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	-7290	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8708113548496	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATAGCTCTGGGGTCTCT	813	False	NA	10	True	AATAAA	-19	NA	28219028	28281747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28219131_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.45	chr17	+	5508	13	ISM	ENSMUSG00000024219.17	ENSMUST00000139173.3	4517	14	179	0	179	0	intron_retention	FALSE	canonical	3	31	junction_12	8.89131911223276	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4282	False	NA	14	True	CATAAA	-15	NA	28226497	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14707.46	chr17	+	4418	15	NIC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	201	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	13.821197857063	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTTTGAATTATAAACA	4304	False	NA	17	True	CATAAA	-18	NA	28226519	28281576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.47	chr17	+	4292	14	FSM	ENSMUSG00000024219.17	ENSMUST00000139173.3	4517	14	223	2	223	0	multi-exon	FALSE	canonical	3	31	junction_12	9.06061115798559	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATTTTGTTTGAATTAT	4326	False	NA	12	True	CATAAA	-13	NA	28226541	28281571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.48	chr17	+	4126	14	NIC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	937	0	intron_retention	FALSE	canonical	3	19	junction_12	11.4059052493089	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	186	False	NA	14	True	CATAAA	-15	NA	28227255	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28278366_28279535
ES.14707.49	chr17	+	3404	12	ISM	ENSMUSG00000024219.17	ENSMUST00000139173.3	4517	14	35183	0	87	0	3prime_fragment	FALSE	canonical	3	31	junction_10	9.16515138991168	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	8942	False	NA	14	True	CATAAA	-15	NA	28261501	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.5	chr17	+	6897	24	FSM	ENSMUSG00000024219.17	ENSMUST00000088027.7	6838	24	-21	-38	-10	38	multi-exon	FALSE	canonical	3	18	junction_23	11.3514070645029	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACCAACCTGTGCATCA	4229	False	NA	52	True	TATAAA	-18	NA	28128269	28281611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.50	chr17	+	5159	12	NNC	ENSMUSG00000024219.17	novel	1099	7	NA	NA	-5499	-2	intron_retention	FALSE	canonical	0	0	junction_1	20.1814086772541	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATAGCTCTGGGGTCTCT	5686	False	NA	10	True	AATAAA	-19	NA	28267807	28281747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28268269_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.51	chr17	+	3762	13	NNC	ENSMUSG00000024219.17	novel	1099	7	NA	NA	-5446	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3324353239719	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	5739	False	NA	14	True	CATAAA	-15	NA	28267860	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28268269_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.52	chr17	+	4555	8	ISM	ENSMUSG00000024219.17	ENSMUST00000025058.15	6846	25	142871	5	-2090	-3	3prime_fragment	FALSE	canonical	3	18	junction_7	17.2283582076358	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCGATTTTGTTTGAAT	9095	False	NA	9	True	CATAAA	-10	NA	28271216	28281568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267
ES.14707.53	chr17	+	3106	9	NIC	ENSMUSG00000024219.17	novel	4517	14	NA	NA	-1806	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.1820695524398	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	9379	False	NA	14	True	CATAAA	-15	NA	28271500	28281573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
ES.14707.6	chr17	+	1445	8	ISM	ENSMUSG00000024219.17	ENSMUST00000025058.15	6846	25	-68	75529	-2	10239	5prime_fragment	FALSE	canonical	2	10	junction_3	19.2534121015217	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATTCCAGCACTTGAA	4237	False	NA	NA	False	ATTAAA	-18	NA	28128277	28206044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718
ES.14707.7	chr17	+	5758	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	-29	-12	-2	0	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4237	False	NA	12	True	AATAAA	-21	NA	28128277	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ES.14707.9	chr17	+	7733	22	NIC	ENSMUSG00000024219.17	novel	5819	25	NA	NA	-1	0	intron_retention	FALSE	canonical	3	31	junction_21	7.74684487015048	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4238	False	NA	12	True	AATAAA	-21	NA	28128278	28281749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267
ES.14708.10	chr17	-	3851	3	NIC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	19	-82	intron_retention	FALSE	canonical	3	141	junction_1	1	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAAAGTTTATTTTAT	NA	False	NA	-28	True	ATTAAA	-14	NA	28128197	28120183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28122163_28124235_28124385_28126474
ES.14708.11	chr17	-	1475	1	FSM	ENSMUSG00000024218.14	ENSMUST00000233306.2	1496	1	21	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	28126688	28125213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28125200_28126700
ES.14708.2	chr17	-	2209	6	NNC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.2483469164679	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28128206	28120101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127225_28127743
ES.14708.3	chr17	-	1925	6	NNC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	60.8526088183572	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28128210	28120101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28126937_28127743
ES.14708.4	chr17	-	2224	6	NNC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.2483469164679	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28128220	28120101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127226_28127743
ES.14708.5	chr17	-	1686	4	NIC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	10	0	intron_retention	FALSE	canonical	3	141	junction_2	7.11805216802087	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28126688	28120101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28120764_28121501_28122163_28124235_28124385_28126474
ES.14708.6	chr17	-	3286	4	NIC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	143	junction_3	9.0921211313239	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28126691	28120101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28120764_28121501_28121599_28122074_28124385_28126474
ES.14708.8	chr17	-	3022	4	NIC	ENSMUSG00000024218.14	novel	1220	5	NA	NA	167	-2	intron_retention	FALSE	canonical	1	1	junction_3	75.495400890091	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACAGGGTTTCTCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	28128651	28120103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28120764_28121501_28121599_28122074_28122163_28126474
ES.14708.9	chr17	-	2179	6	NIC	ENSMUSG00000024218.14	novel	2207	6	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	59.2702286143727	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACAGGGTTTCTCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	28128185	28120103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127743
ES.14709.1	chr17	-	2415	1	Antisense	novelGene_ENSMUSG00000117130.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTGTAACCAGCAGCC	8118	False	NA	NA	False	NA	NA	NA	28203432	28201017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28201000_28203400
ES.1471.1	chr1	-	172	2	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	136509655	136487986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136488131_136509627
ES.1471.2	chr1	-	171	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	136488157	136487986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136488000_136488200
ES.1471.3	chr1	-	163	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	136500075	136499912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136499900_136500100
ES.14710.1	chr17	-	177	1	Intergenic	novelGene_12314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGGGTG	5144	False	NA	NA	False	NA	NA	NA	28212585	28212408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28212400_28212600
ES.14711.1	chr17	-	2236	1	Intergenic	novelGene_12315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGGACCCGGACAACAG	NA	False	NA	NA	False	NA	NA	NA	28266326	28264090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28264100_28266300
ES.14712.1	chr17	-	3176	3	Antisense	novelGene_ENSMUSG00000024219.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAGATATGA	NA	False	NA	NA	False	NA	NA	NA	28278243	28273955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28276438_28277262_28277435_28277721
ES.14713.1	chr17	-	188	1	Intergenic	novelGene_12316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAAATCTGATTATGC	NA	False	NA	NA	False	NA	NA	NA	28283185	28282997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28283000_28283200
ES.14714.1	chr17	+	179	1	Intergenic	novelGene_12317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAAACC	3264	False	NA	NA	False	NA	NA	NA	28283550	28283729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28283600_28283700
ES.14715.1	chr17	+	1533	2	Antisense	novelGene_ENSMUSG00000062859.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCGCAGCTCACCTGG	5700	False	NA	NA	False	NA	NA	NA	28285986	28288140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28286143_28286763
ES.14715.2	chr17	+	1870	1	Antisense	novelGene_ENSMUSG00000062859.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	7080	False	NA	NA	False	NA	NA	NA	28287366	28289236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28287400_28289200
ES.14716.1	chr17	-	2311	10	FSM	ENSMUSG00000062859.16	ENSMUST00000129046.9	1948	10	-3	-360	-3	358	multi-exon	FALSE	canonical	3	11	junction_9	12.0349285902676	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGAAGTTCTGAAATG	NA	False	NA	NA	False	AATGAA	-15	NA	28299580	28285360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299548
ES.14716.11	chr17	-	3795	9	NIC	ENSMUSG00000062859.16	novel	1948	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	11	junction_8	12.7567384154415	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28299566	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28299280_28299548
ES.14716.13	chr17	-	1912	4	NNC	ENSMUSG00000117120.2	novel	496	3	NA	NA	-309	1346	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.539514973407	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGAAGGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	28299578	28294045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28295471_28296959_28297033_28298895_28299280_28299548
ES.14716.15	chr17	-	1820	4	NNC	ENSMUSG00000117120.2	novel	496	3	NA	NA	-311	1234	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.71404520791032	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTGTTTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	28299580	28294157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28295471_28296959_28297051_28298895_28299280_28299548
ES.14716.16	chr17	-	1782	4	NNC	ENSMUSG00000117120.2	novel	496	3	NA	NA	-297	1228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.539514973407	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGACTGCTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	28299566	28294163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28295471_28296959_28297033_28298895_28299280_28299548
ES.14716.2	chr17	-	1738	10	NNC	ENSMUSG00000062859.16	novel	1948	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	13.1214648384307	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCATTCTTCTTTGATG	NA	False	NA	0	True	AATAAA	-19	NA	28299564	28285719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28285945_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299548
ES.14716.3	chr17	-	2877	7	FSM	ENSMUSG00000085521.5_ENSMUSG00000062859.16	ENSMUST00000233961.2	1507	7	-1370	0	164	0	multi-exon	FALSE	canonical	3	28	junction_6	8.31497978884428	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	28295165	28285724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625
ES.14716.4	chr17	-	2777	9	NIC	ENSMUSG00000062859.16	novel	1743	10	NA	NA	16	-1	intron_retention	FALSE	canonical	3	11	junction_8	15.3047174100014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28299597	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28290806_28293625_28293747_28296959_28297033_28299132_28299280_28299548
ES.14716.5	chr17	-	1709	10	FSM	ENSMUSG00000062859.16	ENSMUST00000043925.16	1743	10	33	1	-3	-1	multi-exon	FALSE	canonical	3	11	junction_9	14.4743280617618	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28299580	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28299132_28299280_28299548
ES.14716.6	chr17	-	1967	10	NIC	ENSMUSG00000062859.16	novel	1989	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	14.7120509938093	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28299493	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299440
ES.14716.7	chr17	-	1979	10	FSM	ENSMUSG00000062859.16	ENSMUST00000042692.13	1989	10	3	7	3	-1	multi-exon	FALSE	canonical	3	14	junction_9	11.2787355915107	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28299558	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298895_28299280_28299493
ES.14716.8	chr17	-	2024	8	NNC	ENSMUSG00000062859.16	novel	1978	8	NA	NA	-1147	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.7708587070581	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGACGGCCATTCTTCT	NA	False	NA	-6	True	AATAAA	-13	NA	28294942	28285725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288564_28289396_28289534_28290584_28290806_28293625_28293747_28294292
ES.14717.1	chr17	-	175	1	Intergenic	novelGene_12318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	28307419	28307244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28307200_28307400
ES.14718.1	chr17	-	179	1	Intergenic	novelGene_12319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGGTAAATAGA	NA	False	NA	NA	False	NA	NA	NA	28308869	28308690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28308700_28308900
ES.14719.1	chr17	-	158	1	Intergenic	novelGene_12320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28312913	28312755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28312800_28312900
ES.1472.1	chr1	-	2082	1	Genic_Genomic	ENSMUSG00000104366.2	novel	NA	NA	NA	NA	1361	1007	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACACCAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	136531845	136529763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_136529800_136531800
ES.14720.1	chr17	+	240	1	Intergenic	novelGene_12321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAATGTTTCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	28313325	28313565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28313300_28313600
ES.14721.1	chr17	+	174	1	Intergenic	novelGene_12322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAACAATGTA	1580	False	NA	NA	False	NA	NA	NA	28315126	28315300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28315100_28315300
ES.14722.1	chr17	-	200	1	Intergenic	novelGene_12323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTAAAGTAAAACCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	28319450	28319250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28319200_28319400
ES.14723.1	chr17	+	3252	22	NNC	ENSMUSG00000038677.15	novel	4003	16	NA	NA	-11806	-363	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.40569615612826	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATAGCATGGTGCCTTG	NA	False	NA	NA	False	AATAGA	-19	NA	28349308	28390553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28349430_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.11	chr17	+	6925	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-389	-2714	-4	-3	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTCTAGCAAGCATCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	28361110	28393825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.12	chr17	+	6779	22	NNC	ENSMUSG00000038677.15	novel	6876	22	NA	NA	-56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	9.28192841016014	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTCTAGCAAGCATCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	28361235	28393825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386709_28387102_28387256_28387355_28387436_28390169
ES.14723.14	chr17	+	5464	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	148	1264	-29	563	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGCTTTCTACTGCCA	NA	False	NA	NA	False	NA	NA	NA	28361262	28392564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.15	chr17	+	3366	23	NNC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-28	-491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.81986517555693	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCAGGCGCTCTCCCTT	NA	False	NA	0	True	AAGAAA	-28	NA	28361263	28390425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381933_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.16	chr17	+	3492	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-231	561	-23	-366	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTATAGCATGGTGCC	NA	False	NA	NA	False	AATAGA	-16	NA	28361268	28390550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.17	chr17	+	3300	23	NNC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-18	-490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.7561245286596	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCAGGCGCTCTCCCTTT	NA	False	NA	1	True	AAGAAA	-29	NA	28361273	28390426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28361585_28371371_28371495_28372532_28372596_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.18	chr17	+	3025	21	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-9	900	combination_of_known_junctions	FALSE	canonical	2	7	junction_16	10.2921086274874	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGGGGCATGCGCTT	NA	False	NA	NA	False	NA	NA	NA	28361282	28387525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355
ES.14723.19	chr17	+	3317	22	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-7	-363	combination_of_known_junctions	FALSE	canonical	2	7	junction_16	10.2313377477651	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATAGCATGGTGCCTTG	NA	False	NA	NA	False	AATAGA	-19	NA	28361284	28390553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.2	chr17	+	3134	22	NNC	ENSMUSG00000038677.15	novel	4003	16	NA	NA	-11802	-363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.9860084720882	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATAGCATGGTGCCTTG	NA	False	NA	NA	False	AATAGA	-19	NA	28349312	28390553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28349430_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.20	chr17	+	3263	21	NIC	ENSMUSG00000038677.15	novel	6876	22	NA	NA	0	-362	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.34805366537614	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGCATGGTGCCTTGC	NA	False	NA	NA	False	AATAGA	-20	NA	28361291	28390554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.21	chr17	+	7270	21	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	18	-11	intron_retention	FALSE	canonical	3	10	junction_6	9.15641851380768	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTCCGAGGTCTAGCA	NA	False	NA	NA	False	ATTAAA	-9	NA	28361309	28393817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.22	chr17	+	6382	21	NIC	ENSMUSG00000038677.15	novel	6876	22	NA	NA	-54	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.34805366537614	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTAGCAAGCATCCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	28361445	28393827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.23	chr17	+	3323	24	NNC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-25	-365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.1261880485409	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTATAGCATGGTGCCT	NA	False	NA	NA	False	AATAGA	-17	NA	28361474	28390551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381521_28381558_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.24	chr17	+	5754	31	Fusion	ENSMUSG00000038677.15_ENSMUSG00000024220.15	novel	3822	23	NA	NA	-5305	1	intron_retention	FALSE	canonical	0	0	junction_19	27.8540043001999	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28372542	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.25	chr17	+	6200	20	ISM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	13365	-2711	-2983	-6	3prime_fragment	FALSE	canonical	3	10	junction_3	9.10176385450413	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAGGTCTAGCAAGCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	28374864	28393822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.26	chr17	+	4579	7	ISM	ENSMUSG00000038677.15	ENSMUST00000148342.8	4003	16	5225	-1823	177	-4	3prime_fragment	FALSE	canonical	3	23	junction_4	5.65685424949238	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGGTCTAGCAAGCATCC	NA	False	NA	NA	False	ATTAAA	-16	NA	28384959	28393824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.27	chr17	+	3043	2	NNC	ENSMUSG00000038677.15	novel	4003	16	NA	NA	5740	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCCGAGGTCTAGCAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	28390522	28393819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28390596_28390849
ES.14723.28	chr17	+	2869	14	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	21.8653761585803	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	4	True	AATAAA	-16	NA	28396120	28424860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416724_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.29	chr17	+	3280	12	NNC	ENSMUSG00000024220.15	novel	2368	13	NA	NA	-14	-2	intron_retention	TRUE	canonical	0	0	junction_10	26.5547928779983	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTGGGCTCCTCCATC	NA	False	NA	0	True	AATAAA	-12	NA	28396122	28424856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28423497_28423543_28424084
ES.14723.3	chr17	+	3194	23	NNC	ENSMUSG00000038677.15	novel	4003	16	NA	NA	-1340	-492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.878365822825	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCAGGCGCTCTCCCT	NA	False	NA	-1	True	AAGAAA	-27	NA	28359774	28390424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28359919_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.31	chr17	+	2601	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	22.220486043289	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396130	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.32	chr17	+	3998	12	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	64	junction_8	10.1484843960658	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396133	28424858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.33	chr17	+	2812	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	51	1	17	1	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396153	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.34	chr17	+	2703	14	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	-8	1	combination_of_known_junctions	TRUE	canonical	1	5	junction_8	22.6992166796527	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396172	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420324_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.35	chr17	+	4470	14	NNC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.8786530567096	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396182	28424858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28415073_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421074_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.36	chr17	+	2649	14	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	24.4777401594512	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396329	28424858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421074_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.37	chr17	+	3263	13	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	64	junction_9	9.71646655025489	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396376	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.38	chr17	+	3345	12	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	74	junction_5	7.72031772565896	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTGGGCTCCTCCATC	NA	False	NA	0	True	AATAAA	-12	NA	28396377	28424856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.39	chr17	+	2588	14	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	24.3929857024369	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396391	28424858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421393_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.4	chr17	+	3730	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	-254	3400	-254	-488	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGCGCTCTCCCTTTCG	NA	False	NA	3	True	AAGAAA	-31	NA	28360860	28390428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.40	chr17	+	4314	10	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	74	junction_5	7.18193893830769	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396391	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28420108_28420234_28422225_28423428_28423543_28424084
ES.14723.41	chr17	+	3351	12	NIC	ENSMUSG00000024220.15	novel	2864	14	NA	NA	6	1	intron_retention	FALSE	canonical	2	11	junction_4	23.0536564210575	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGCTCCTCCATCATT	NA	False	NA	3	True	AATAAA	-15	NA	28396397	28424859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416724_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.43	chr17	+	3726	12	NIC	ENSMUSG00000024220.15	novel	2710	15	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_8	26.1688730623879	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGCTCCTCCATCAT	NA	False	NA	2	True	AATAAA	-14	NA	28396420	28424858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28420108_28420234_28421323_28421393_28421573_28422059_28422225_28423428_28423543_28424084
ES.14723.44	chr17	+	178	1	Intergenic	novelGene_12325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28406469	28406647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28406500_28406600
ES.14723.5	chr17	+	3542	22	NIC	ENSMUSG00000038677.15	novel	3822	23	NA	NA	-176	-484	combination_of_known_junctions	FALSE	canonical	2	7	junction_16	10.2313377477651	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGCTCTCCCTTTCGGCCT	NA	False	NA	7	True	AAGAAA	-35	NA	28360938	28390432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.6	chr17	+	3696	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	-557	683	-172	-488	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGCGCTCTCCCTTTCG	NA	False	NA	3	True	AAGAAA	-31	NA	28360942	28390428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.7	chr17	+	7045	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	-170	1	-170	-1	multi-exon	FALSE	canonical	3	23	junction_15	6.58693821908486	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTAGCAAGCATCCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	28360944	28393827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.8	chr17	+	3484	21	NIC	ENSMUSG00000038677.15	novel	6876	22	NA	NA	-169	-487	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.34805366537614	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCGCTCTCCCTTTCGG	NA	False	NA	4	True	AAGAAA	-32	NA	28360945	28390429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ES.14723.9	chr17	+	3228	18	ISM	ENSMUSG00000038677.15	ENSMUST00000132670.3	4354	20	-480	2127	-95	367	5prime_fragment	FALSE	canonical	2	7	junction_15	8.55594251085963	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGGGTGTGTGGCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	28361019	28386992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28385330_28385499_28385999_28386162_28386483
ES.14724.1	chr17	-	2776	6	Intergenic	novelGene_12324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTGTTTTGTTTA	5723	False	NA	NA	False	NA	NA	NA	28359492	28340619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28342257_28342331_28342741_28346639_28346812_28350414_28350598_28358493_28358600_28359223
ES.14725.1	chr17	-	184	1	Intergenic	novelGene_12326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACATACCC	512	False	NA	NA	False	NA	NA	NA	28418002	28417818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28417800_28418000
ES.14726.1	chr17	+	2294	11	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.568650436677	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426772	28447577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28426913_28435895_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ES.14726.10	chr17	+	159	1	Intergenic	novelGene_12327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	28438372	28438531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28438400_28438500
ES.14726.11	chr17	+	3838	1	Genic_Genomic	ENSMUSG00000002257.9	novel	NA	NA	NA	NA	11392	3654	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTGTATTTTCATTCC	NA	False	NA	NA	False	NA	NA	NA	28447398	28451236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_28447400_28451200
ES.14726.2	chr17	+	2251	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	21	5	-4	-5	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTCCTGCCCTTCCCT	NA	False	NA	12	True	AATAAA	-17	NA	28426772	28447577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ES.14726.3	chr17	+	2036	9	ISM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	26	1893	1	704	5prime_fragment	FALSE	canonical	3	110	junction_2	8.61593726764535	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGTGTGCTTTGTC	NA	False	NA	NA	False	ATTAAA	-5	NA	28426777	28445689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074
ES.14726.4	chr17	+	2309	1	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	5	-2498	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	28426781	28429090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28426800_28429100
ES.14726.5	chr17	+	3436	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	47	-1206	-1	1206	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTCCGTCCATCCG	NA	False	NA	NA	False	NA	NA	NA	28426798	28448788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ES.14726.6	chr17	+	2080	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	52	145	4	-145	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGTTGTGTGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	28426803	28447437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ES.14726.7	chr17	+	2072	10	NIC	ENSMUSG00000002257.9	novel	2277	11	NA	NA	4	-6	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	44.5274225396518	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTCCTGCCCTTCCC	NA	False	NA	11	True	AATAAA	-16	NA	28426803	28447576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ES.14727.1	chr17	-	3139	2	Genic_Genomic	ENSMUSG00000117028.2	novel	1064	1	NA	NA	665	4889	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	9555	False	NA	NA	False	NA	NA	NA	28442476	28437188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_28439642_28441790
ES.14727.2	chr17	-	2847	2	Genic_Genomic	ENSMUSG00000117028.2	novel	1064	1	NA	NA	665	2490	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAGAAAAGAAAAAA	9555	False	NA	NA	False	NA	NA	NA	28442476	28439587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_28440468_28440509
ES.14728.1	chr17	-	2342	2	Antisense	novelGene_ENSMUSG00000002257.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7094	False	NA	NA	False	AGTAAA	-18	NA	28448555	28446042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28446870_28447040
ES.14728.2	chr17	-	2162	1	Antisense	novelGene_ENSMUSG00000002257.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAGGGTATGTAACTGT	7094	False	NA	NA	False	NA	NA	NA	28448555	28446393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28446400_28448600
ES.14729.1	chr17	+	3147	7	NIC	ENSMUSG00000002250.17	novel	3277	8	NA	NA	-10	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.70801280154532	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGACTTGTAGCCAT	NA	False	NA	17	True	AATAAA	-17	NA	28451710	28520439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28451839_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
ES.14729.2	chr17	+	3234	8	FSM	ENSMUSG00000002250.17	ENSMUST00000002320.16	3277	8	41	2	-6	-2	multi-exon	FALSE	canonical	2	4	junction_5	2.32115382989599	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTAGCCATCTGAGTT	NA	False	NA	24	True	AATAAA	-24	NA	28451714	28520446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
ES.14729.3	chr17	+	1485	2	NNC	ENSMUSG00000002250.17	novel	1433	4	NA	NA	-4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGACTTGTAGCCAT	NA	False	NA	17	True	AATAAA	-17	NA	28451716	28520439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28451797_28519034
ES.14729.4	chr17	+	3174	6	NIC	ENSMUSG00000002250.17	novel	1739	7	NA	NA	-4	-9	intron_retention	FALSE	canonical	0	0	junction_3	3.86781592116274	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGACTTGTAGCCAT	NA	False	NA	17	True	AATAAA	-17	NA	28451716	28520439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28451839_28455985_28456070_28505234_28505442_28516059_28516199_28517250_28518009_28518575
ES.14729.5	chr17	+	1841	4	FSM	ENSMUSG00000002250.17	ENSMUST00000123020.9	1433	4	-14	-394	3	-196	multi-exon	FALSE	canonical	2	5	junction_1	2.62466929133727	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGGATATTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	28451723	28515749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314
ES.1473.1	chr1	-	503	2	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAAGGCTGGTAAGAT	NA	False	NA	NA	False	NA	NA	NA	136568590	136566292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136566363_136568157
ES.1473.2	chr1	-	2298	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAAGGCTGGTAAGAT	NA	False	NA	NA	False	NA	NA	NA	136568590	136566292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136566300_136568600
ES.14730.1	chr17	-	184	1	Intergenic	novelGene_12328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGATAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	28523127	28522943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28522900_28523100
ES.14731.1	chr17	+	1707	10	NNC	ENSMUSG00000007570.17	novel	1197	10	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.3468942493774	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	192	False	NA	12	True	AATAAA	-14	NA	28532378	28545541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532430_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.10	chr17	+	3900	7	NIC	ENSMUSG00000007570.17	novel	2193	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	26	junction_6	58.7719226237231	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTGGTGGCTCAGC	351	False	NA	13	True	AATAAA	-15	NA	28532537	28545542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537035_28537382_28539763_28541746_28545067
ES.14731.11	chr17	+	2070	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	55.0784894491488	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	351	False	NA	12	True	AATAAA	-14	NA	28532537	28545541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
ES.14731.12	chr17	+	3633	10	NNC	ENSMUSG00000007570.17	novel	1942	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	51.7260113184226	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGGCTCAGCCCTGT	351	False	NA	18	True	AATAAA	-20	NA	28532537	28545547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28541512_28541619_28541746_28545125
ES.14731.13	chr17	+	3381	10	NNC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-2	-2573	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	56.2588813290405	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACAAACAAA	351	False	NA	NA	False	NA	NA	NA	28532537	28542685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28541512_28541619_28541746_28542544
ES.14731.14	chr17	+	1845	9	FSM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	-4	1	1	0	multi-exon	FALSE	canonical	3	8	junction_8	47.2385898921634	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	355	False	NA	12	True	AATAAA	-14	NA	28532541	28545541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
ES.14731.15	chr17	+	2031	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	40.6086410557539	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCAGCCCTGTC	360	False	NA	19	True	AATAAA	-21	NA	28532546	28545548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
ES.14731.16	chr17	+	2190	9	NIC	ENSMUSG00000007570.17	novel	1942	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_4	41.148359627086	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	360	False	NA	11	True	AATAAA	-13	NA	28532546	28545540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.17	chr17	+	1954	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	49.7543967906355	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	363	False	NA	11	True	AATAAA	-13	NA	28532549	28545540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
ES.14731.18	chr17	+	1970	9	NNC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	62.4794966368968	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	365	False	NA	12	True	AATAAA	-14	NA	28532551	28545541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539767_28539831_28541619_28541746_28545067
ES.14731.19	chr17	+	5989	2	NNC	ENSMUSG00000007570.17	novel	536	3	NA	NA	1922	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	7164	False	NA	12	True	AATAAA	-14	NA	28539350	28545541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28542537_28542738
ES.14731.2	chr17	+	1970	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	35.076478942448	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGTGGCTCAGCCCT	294	False	NA	16	True	AATAAA	-18	NA	28532480	28545545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.20	chr17	+	4492	4	FSM	ENSMUSG00000007570.17_ENSMUSG00000037805.16	ENSMUST00000232770.2	1202	4	-3291	1	-3146	-1	multi-exon	FALSE	canonical	3	5482	junction_2	1519.39724891155	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28544298	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547860_28547940_28548497_28549498_28549672_28549803
ES.14731.21	chr17	+	798	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	32	0	32	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547476	28550007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ES.14731.22	chr17	+	2352	2	FSM	ENSMUSG00000037805.16	ENSMUST00000141049.2	1618	2	-729	-5	-19	0	multi-exon	FALSE	canonical	3	8416	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547522	28550006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28549672_28549803
ES.14731.24	chr17	+	2062	4	NIC	ENSMUSG00000037805.16	novel	1022	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	5715	junction_1	1410.70297684838	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547538	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28547593_28547784_28547860_28547940_28549672_28549803
ES.14731.25	chr17	+	2275	2	FSM	ENSMUSG00000037805.16	ENSMUST00000233852.2	693	2	-34	-1548	-3	-1	multi-exon	FALSE	canonical	3	5715	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547538	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547593_28547784
ES.14731.26	chr17	+	967	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	-19	1	-3	-1	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547538	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
ES.14731.27	chr17	+	910	5	FSM	ENSMUSG00000037805.16	ENSMUST00000152665.3	901	5	-5	-4	-2	-1	multi-exon	FALSE	canonical	3	5482	junction_3	1346.05653205948	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547554	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ES.14731.28	chr17	+	2450	1	NIC	ENSMUSG00000037805.16	novel	830	6	NA	NA	-1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	635	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547555	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28547600_28550000
ES.14731.29	chr17	+	1044	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	-17	-5	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547556	28550007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
ES.14731.3	chr17	+	2089	11	NIC	ENSMUSG00000007570.17	novel	1942	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	59.394023268339	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGTGGCTCAGCCCT	307	False	NA	16	True	AATAAA	-18	NA	28532493	28545545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
ES.14731.30	chr17	+	2125	3	NIC	ENSMUSG00000037805.16	novel	553	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	5715	junction_1	1350.5	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547556	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28547593_28547784_28549672_28549803
ES.14731.31	chr17	+	708	6	NNC	ENSMUSG00000037805.16	novel	729	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3855.79821048768	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547556	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28547593_28547787_28547860_28547940_28548013_28548343_28548497_28549498_28549672_28549803
ES.14731.35	chr17	+	677	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3148.35038710751	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547556	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549669_28549839
ES.14731.36	chr17	+	2238	3	NIC	ENSMUSG00000037805.16	novel	553	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8416	junction_2	258	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547556	28550007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28547860_28547940_28549672_28549803
ES.14731.37	chr17	+	1946	5	NIC	ENSMUSG00000037805.16	novel	949	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	728	junction_3	3251.84442855128	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCAGCCTTGGTGTGCCT	NA	False	NA	-6	True	AATAAA	-13	NA	28547556	28550000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28549672_28549803
ES.14731.38	chr17	+	2174	3	FSM	ENSMUSG00000037805.16	ENSMUST00000128758.9	936	3	0	-1238	0	1	multi-exon	FALSE	canonical	3	5715	junction_1	1608.5	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTTGGTGTGCCTGTG	NA	False	NA	-3	True	AATAAA	-16	NA	28547556	28550003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28547593_28547784_28547860_28547940
ES.14731.4	chr17	+	5197	10	NNC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	47.8178126839418	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCAGCCCTGTC	312	False	NA	19	True	AATAAA	-21	NA	28532498	28545548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28542535_28542738
ES.14731.40	chr17	+	732	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	3045.3788335772	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGCCTGTGAT	NA	False	NA	-1	True	AATAAA	-18	NA	28547556	28550005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28547593_28547784_28547860_28547924_28548022_28548347_28548497_28549498_28549672_28549803
ES.14731.41	chr17	+	703	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3325.42969253599	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTGGTGTGCCTGTGA	NA	False	NA	-2	True	AATAAA	-17	NA	28547556	28550004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549510_28549672_28549803
ES.14731.42	chr17	+	986	6	NNC	ENSMUSG00000037805.16	novel	1022	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3173.63589594018	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCAGCCTTGGTGTGCC	NA	False	NA	-7	True	AATAAA	-12	NA	28547556	28549999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28547593_28547784_28547860_28547940_28548317_28548366_28548497_28549498_28549672_28549803
ES.14731.46	chr17	+	917	5	ISM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	225	-1	162	0	3prime_fragment	FALSE	canonical	3	728	junction_2	3257.57375204308	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547782	28550007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
ES.14731.5	chr17	+	2019	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	8	-2	4	2	multi-exon	FALSE	canonical	3	100	junction_4	20.9655802580218	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCAGCCCTGTC	314	False	NA	19	True	AATAAA	-21	NA	28532500	28545548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.6	chr17	+	1983	10	FSM	ENSMUSG00000007570.17	ENSMUST00000088007.12	1942	10	-36	-5	8	0	multi-exon	FALSE	canonical	3	32	junction_5	38.9558154266543	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGTGGCTCAGCCCT	318	False	NA	16	True	AATAAA	-18	NA	28532504	28545545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.7	chr17	+	1952	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	45.8705719933816	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCCAGGCTTGGTGGCT	326	False	NA	9	True	AATAAA	-11	NA	28532512	28545538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28532857_28534572_28535162_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ES.14731.8	chr17	+	2620	11	NNC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.2398406949187	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	340	False	NA	11	True	AATAAA	-13	NA	28532526	28545540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28540876_28541512_28541619_28541746_28545125
ES.14731.9	chr17	+	5424	8	NNC	ENSMUSG00000007570.17	novel	2193	9	NA	NA	6	1	intron_retention	TRUE	non_canonical	0	0	junction_6	68.5330249602634	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGGCTCAGCCCTGT	340	False	NA	18	True	AATAAA	-20	NA	28532526	28545547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28537382_28539763_28539831_28541619_28542545_28542747_28544796_28545067
ES.14732.1	chr17	+	162	1	Intergenic	novelGene_12329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCATC	61	False	NA	NA	False	NA	NA	NA	28558410	28558572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28558400_28558600
ES.14733.1	chr17	-	2565	12	NNC	ENSMUSG00000002249.22	novel	2585	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.83717936987768	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCCATATGCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	28569774	28550687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555475_28555548_28559127_28559193_28560322_28560575_28569582
ES.14733.2	chr17	-	4025	11	NIC	ENSMUSG00000002249.22	novel	2585	13	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_10	2.6	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCCATATGCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	28569769	28550687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28555548_28559127_28559193_28560322_28560575_28569582
ES.14733.4	chr17	-	2458	12	NNC	ENSMUSG00000002249.22	novel	3443	12	NA	NA	-15	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.83717936987768	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCCAGCTGTGATGGG	NA	False	NA	NA	False	NA	NA	NA	28569774	28550794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555475_28555548_28559127_28559193_28560322_28560575_28569582
ES.14734.1	chr17	-	173	1	Intergenic	novelGene_12330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	28592105	28591932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28591900_28592100
ES.14735.1	chr17	-	178	2	Intergenic	novelGene_12331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGGG	NA	False	NA	NA	False	NA	NA	NA	28609367	28596921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28597051_28609318
ES.14736.1	chr17	+	2580	1	Antisense	novelGene_ENSMUSG00000024222.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1815	False	NA	NA	False	NA	NA	NA	28629281	28631861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28629300_28631900
ES.14737.1	chr17	+	501	1	Antisense	novelGene_ENSMUSG00000117313.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTAAGGATGTTC	NA	False	NA	NA	False	NA	NA	NA	28645263	28645764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28645300_28645800
ES.14737.2	chr17	+	260	1	Antisense	novelGene_ENSMUSG00000117313.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAATGTGTCTGACA	NA	False	NA	NA	False	NA	NA	NA	28645264	28645524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28645300_28645500
ES.14738.1	chr17	+	175	1	Antisense	novelGene_ENSMUSG00000024222.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTACTCTTAT	NA	False	NA	NA	False	NA	NA	NA	28656403	28656578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28656400_28656600
ES.14739.1	chr17	+	158	1	Intergenic	novelGene_12332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	28667994	28668152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28668000_28668200
ES.1474.1	chr1	-	2366	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8481	False	NA	NA	False	NA	NA	NA	136572104	136569738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136569700_136572100
ES.14740.1	chr17	+	2278	1	Intergenic	novelGene_12333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTACAGACTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	28683995	28686273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28684000_28686300
ES.14741.1	chr17	+	467	1	Intergenic	novelGene_12335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGTGAAAAAAAAAAAAAA	2413	False	NA	NA	False	NA	NA	NA	28695047	28695514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28695000_28695500
ES.14741.2	chr17	+	4448	3	Antisense	novelGene_ENSMUSG00000024222.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAAACCACCAGCTCCC	2413	False	NA	NA	False	AAAACA	-43	NA	28695047	28703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_28695305_28695553_28699107_28703227
ES.14742.1	chr17	-	4228	2	ISM	ENSMUSG00000024222.18	ENSMUST00000233372.2	615	4	15688	-3826	15688	1962	3prime_fragment	FALSE	canonical	3	551	junction_1	0	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	700	False	NA	NA	False	NA	NA	NA	28621790	28616105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_28620126_28621582
ES.14742.10	chr17	-	3393	11	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	-146	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	176.808964704847	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	-13	True	AATAAA	-16	NA	28726526	28618069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28726476
ES.14742.11	chr17	-	2898	7	NNC	ENSMUSG00000024222.18	novel	1414	7	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.00967008266	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	-13	True	AATAAA	-16	NA	28637485	28618069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637401
ES.14742.13	chr17	-	3822	14	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-1003	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	249.001699098312	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	-13	True	AATAAA	-16	NA	28737504	28618069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28718339_28718393_28726209_28726444_28736368_28736488_28737431
ES.14742.15	chr17	-	2891	7	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637492	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
ES.14742.19	chr17	-	1925	3	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.5	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705060	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28619835_28660001_28660028_28704925
ES.14742.2	chr17	-	3645	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	-86	-16	-86	16	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTGTTTGT	NA	False	NA	5	True	AATAAA	-34	NA	28705209	28618051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.20	chr17	-	3591	12	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.15714142892	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705065	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629195_28629305_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.25	chr17	-	2407	4	NNC	ENSMUSG00000024222.18	novel	615	4	NA	NA	241	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	264.860130802824	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28647362	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625130_28647321
ES.14742.27	chr17	-	2788	7	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.916761271471	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637487	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621679_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
ES.14742.28	chr17	-	3911	12	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	215.811978160053	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705105	28618070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28665588_28665978_28704925
ES.14742.30	chr17	-	3791	14	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-968	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	248.667264198615	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTCATTGTTCATGG	NA	False	NA	-16	True	AATAAA	-13	NA	28737469	28618072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28718339_28718393_28726209_28726444_28736368_28736488_28737424
ES.14742.31	chr17	-	3682	12	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-353	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	246.611147053899	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTCATTGTTCATGG	NA	False	NA	-16	True	AATAAA	-13	NA	28726733	28618072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648196_28648338_28656965_28657111_28659901_28660028_28726209_28726444_28726623
ES.14742.34	chr17	-	3599	13	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-123	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	237.691443308804	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTCATTGTTCATGG	NA	False	NA	-16	True	AATAAA	-13	NA	28726503	28618072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28706878_28707058_28718339_28718393_28726476
ES.14742.35	chr17	-	3491	11	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	222.385903330225	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTCATTGTTCATGG	NA	False	NA	-16	True	AATAAA	-13	NA	28705065	28618072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647318_28647441_28648190_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.36	chr17	-	3354	11	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	89	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.788557481958	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTCATTGTTCATGG	NA	False	NA	-16	True	AATAAA	-13	NA	28704978	28618072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620089_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647435_28648190_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.4	chr17	-	3479	12	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.15714142892	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28705065	28618067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625130_28629195_28629305_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.40	chr17	-	3468	11	NNC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	167.175237400759	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGGTTTTTCATTGT	NA	False	NA	-22	True	AATAAA	-7	NA	28705065	28618078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647435_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.41	chr17	-	1316	7	NNC	ENSMUSG00000024222.18	novel	1414	7	NA	NA	11	-32	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTTCCTATTGGTGG	NA	False	NA	NA	False	GATAAA	-15	NA	28637490	28619643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
ES.14742.42	chr17	-	1910	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	55	1578	-1	-34	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTTCCTATTGGT	NA	False	NA	NA	False	GATAAA	-13	NA	28705068	28619645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.43	chr17	-	1625	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	58	1860	2	4	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTACAGTCTCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	28705065	28619927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.44	chr17	-	9719	4	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	2	-4095	intron_retention	FALSE	canonical	3	487	junction_3	21.7919455049082	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAAGAAAAGCCTCCTG	NA	False	NA	NA	False	TTTAAA	-40	NA	28705065	28639029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.45	chr17	-	2635	3	ISM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	54	36678	-2	235	5prime_fragment	FALSE	canonical	3	487	junction_2	16	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAGTATAAATACTGT	NA	False	NA	NA	False	ATTAAA	-44	NA	28705069	28654745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_28657111_28659901_28660028_28704925
ES.14742.46	chr17	-	3561	2	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	0	-1628	intron_retention	FALSE	canonical	3	487	junction_1	0	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTGTAAATAAGAGTAA	NA	False	NA	NA	False	NA	NA	NA	28705067	28656608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28660028_28704925
ES.14742.47	chr17	-	2945	1	Intergenic	novelGene_12334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	528	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	1649	False	NA	NA	False	NA	NA	NA	28689577	28686632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28686600_28689600
ES.14742.48	chr17	-	3479	1	Intergenic	novelGene_12336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCCCTCAGATTTT	NA	False	NA	NA	False	NA	NA	NA	28702721	28699242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28699200_28702700
ES.14742.49	chr17	-	175	1	Intergenic	novelGene_12337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTGATGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	28699971	28699796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28699800_28700000
ES.14742.5	chr17	-	2941	7	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	192.900377282046	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28637493	28618067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
ES.14742.50	chr17	-	3157	2	Intergenic	novelGene_12338	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCTGTGCCTGTTCACT	NA	False	NA	NA	False	NA	NA	NA	28713276	28710000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28711554_28711672
ES.14742.51	chr17	-	173	1	Intergenic	novelGene_12339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	28720773	28720600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28720600_28720800
ES.14742.7	chr17	-	3226	10	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	178.430260955622	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTTCATGGCTTT	NA	False	NA	-12	True	AATAAA	-17	NA	28705047	28618068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28620126_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ES.14742.8	chr17	-	3485	12	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	244.244424384622	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTTCATGGCTTT	NA	False	NA	-12	True	AATAAA	-17	NA	28726390	28618068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647418_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28718339_28718393_28726209
ES.14742.9	chr17	-	3507	12	NNC	ENSMUSG00000024222.18	novel	3844	13	NA	NA	-968	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	215.274570016683	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATTGTTCATGGCTT	NA	False	NA	-13	True	AATAAA	-16	NA	28737469	28618069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28736368_28736488_28737424
ES.14743.1	chr17	+	175	1	Intergenic	novelGene_12340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGGTCAGC	NA	False	NA	NA	False	NA	NA	NA	28745695	28745870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28745700_28745900
ES.14744.1	chr17	-	152	1	Intergenic	novelGene_12341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACCTATG	NA	False	NA	NA	False	NA	NA	NA	28755668	28755516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28755500_28755700
ES.14745.1	chr17	+	2335	2	NNC	ENSMUSG00000024223.4	novel	1213	6	NA	NA	8084	2584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGACTTGGCTGCAGT	NA	False	NA	NA	False	NA	NA	NA	28757924	28760668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28758592_28759000
ES.14746.1	chr17	-	2073	2	Intergenic	novelGene_12342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGCAGTGTTGTCGCTC	7617	False	NA	NA	False	NA	NA	NA	28762658	28760154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28760443_28760873
ES.14747.1	chr17	-	215	1	Intergenic	novelGene_12343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGGAAATGTGGGA	NA	False	NA	NA	False	AATAAA	-11	NA	28778353	28778138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28778100_28778400
ES.14748.1	chr17	+	169	1	Intergenic	novelGene_12344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	28785481	28785650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28785500_28785600
ES.14749.1	chr17	-	175	1	Intergenic	novelGene_12345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	28786266	28786091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28786100_28786300
ES.1475.1	chr1	+	2557	3	NNC	ENSMUSG00000097113.8	novel	496	5	NA	NA	-1479	-6	intron_retention	FALSE	canonical	0	0	junction_1	1	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGCCTGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	136602731	136610459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136603022_136603985_136605000_136609206
ES.1475.2	chr1	+	3449	2	NNC	ENSMUSG00000097113.8	novel	678	4	NA	NA	-1405	-4	intron_retention	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCCTGTCTTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	136602805	136610461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_136605000_136609206
ES.1475.3	chr1	+	1621	1	Genic_Genomic	ENSMUSG00000097113.8	novel	NA	NA	NA	NA	-207	-4841	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAACATTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	136604003	136605624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_136604000_136605600
ES.1475.4	chr1	+	2683	1	NIC	ENSMUSG00000097113.8	novel	678	4	NA	NA	744	-2828	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATAGACAAAGGCTGATA	NA	False	NA	NA	False	NA	NA	NA	136604954	136607637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136605000_136607600
ES.1475.5	chr1	+	4963	1	NIC	ENSMUSG00000097113.8	novel	496	5	NA	NA	1286	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGCCTGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	136605496	136610459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_136605500_136610500
ES.14750.1	chr17	+	222	1	Intergenic	novelGene_12346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTGGTTTAGGA	4895	False	NA	NA	False	NA	NA	NA	28822637	28822859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28822600_28822900
ES.14751.1	chr17	-	2901	4	NNC	ENSMUSG00000004865.17	novel	1091	3	NA	NA	295	228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.062017767155	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGCTGGGATTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	28811242	28806393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191
ES.14751.10	chr17	-	3974	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.748976901128	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841467	28806621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808347_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818659_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.11	chr17	-	4827	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	-23	0	-23	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841484	28806621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.13	chr17	-	6972	14	NNC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-29	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	203.175879153561	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTCCACAAGTTTGG	NA	False	NA	-12	True	AATAAA	-19	NA	28841490	28806622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.16	chr17	-	2633	7	NNC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	364.459302712022	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841427	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28808891_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.17	chr17	-	4333	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	184.660996406253	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841427	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808318_28808379_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.2	chr17	-	4443	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-29	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.660996406253	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAATGAAACAGTAGCA	NA	False	NA	37	True	ACTAAA	-1	NA	28841490	28806573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.20	chr17	-	4044	14	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	53	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	181.342234234499	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28826113	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808331_28808394_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057
ES.14751.22	chr17	-	4074	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.927259484515	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841465	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818550_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.25	chr17	-	4375	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	306.150672667887	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841427	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813248_28817668_28817744_28817875_28817977_28818444_28818844_28819216_28819431_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.26	chr17	-	4772	11	NNC	ENSMUSG00000004865.17	novel	2007	12	NA	NA	798	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	204.225757435246	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28825368	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280
ES.14751.27	chr17	-	4178	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.358694341344	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841489	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.28	chr17	-	3543	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	190.043316699699	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841427	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28807827_28809051_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.29	chr17	-	4340	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	14	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	246.442817347599	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTCCACAAGTTTG	NA	False	NA	-13	True	AATAAA	-18	NA	28841443	28806623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808332_28808395_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819441_28821652_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.3	chr17	-	4475	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	191	-13	-31	13	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTCTTTGTTGCCC	NA	False	NA	2	True	AATAAA	-33	NA	28841492	28806608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.33	chr17	-	4970	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-30	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	248.388101343218	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGTTCCACAAGTTT	NA	False	NA	-14	True	AATAAA	-17	NA	28841491	28806624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808347_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813248_28817668_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.34	chr17	-	4089	15	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.595813716816	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGTTCCACAAGTT	NA	False	NA	-15	True	AATAAA	-16	NA	28841428	28806625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.36	chr17	-	4760	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	277.927984995664	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGTTCCACAAGTT	NA	False	NA	-15	True	AATAAA	-16	NA	28841427	28806625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28831932_28831992_28840950_28841012_28841373
ES.14751.37	chr17	-	4362	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	184.660996406253	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTTGGTTCCACAAGT	NA	False	NA	-16	True	AATAAA	-15	NA	28841460	28806626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808323_28808385_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.40	chr17	-	5658	15	NNC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-2	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	195.199021932143	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTTGGTTCCACAAG	NA	False	NA	-17	True	AATAAA	-14	NA	28841427	28806627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.41	chr17	-	4201	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	304.957963291664	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTGCTTGGTTCCACAA	NA	False	NA	-18	True	AATAAA	-13	NA	28841458	28806628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28831932_28831992_28840950_28841012_28841373
ES.14751.42	chr17	-	4706	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	190.043316699699	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTGCTTGGTTCCAC	NA	False	NA	-20	True	AATAAA	-11	NA	28841427	28806630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808359_28808413_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.45	chr17	-	4403	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-30	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	184.660996406253	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTGCTTGGTTCCAC	NA	False	NA	-20	True	AATAAA	-11	NA	28841491	28806630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808332_28808380_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.47	chr17	-	4206	15	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	192.858201055298	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTGCTTGGTTCCAC	NA	False	NA	-20	True	AATAAA	-11	NA	28841459	28806630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.48	chr17	-	5198	14	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	5	-9	intron_retention	FALSE	canonical	3	554	junction_1	87.7263766478664	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTGCTTGGTTCCAC	NA	False	NA	-20	True	AATAAA	-11	NA	28841452	28806630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.54	chr17	-	3807	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	14	-510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.660996406253	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTACAGCAGTTTTAA	NA	False	NA	NA	False	AATAAA	-31	NA	28841411	28807131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808347_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.55	chr17	-	3493	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	176	984	-46	958	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGTGAACTTTGTTTT	NA	False	NA	5	True	NA	NA	NA	28841507	28807605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.58	chr17	-	3432	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-57	951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.660996406253	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAAGGCTTTGTGAACT	NA	False	NA	-2	True	NA	NA	NA	28841518	28807612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.59	chr17	-	3496	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	24	950	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	189.871254626216	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAAAGGCTTTGTGAAC	NA	False	NA	-3	True	NA	NA	NA	28841401	28807613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810385_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.6	chr17	-	4789	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-50	0	intron_retention	FALSE	non_canonical	0	0	junction_1	190.043316699699	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841511	28806621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.61	chr17	-	4803	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	919	intron_retention	FALSE	non_canonical	0	0	junction_1	279.544271985673	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATGTACTTGAGGCTT	NA	False	NA	-34	True	TTTAAA	-18	NA	28841427	28807644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28838306_28839428_28840950_28841012_28841373
ES.14751.62	chr17	-	3270	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	24	916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.442817347599	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGAAATGTACTTGAGG	NA	False	NA	-37	True	TTTAAA	-15	NA	28841401	28807647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819447_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.65	chr17	-	2892	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-29	439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.660996406253	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCTCAGGTGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	28841490	28808124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808346_28808410_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.67	chr17	-	2637	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	219	1797	-3	145	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTGTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	28841464	28808418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.68	chr17	-	2556	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	157	1940	-65	2	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTATGCTCACAT	NA	False	NA	0	True	ATTAAA	-41	NA	28841526	28808561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.69	chr17	-	3242	14	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-2	2	intron_retention	FALSE	canonical	3	554	junction_1	87.7263766478664	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTATGCTCACAT	NA	False	NA	0	True	ATTAAA	-41	NA	28841427	28808561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.72	chr17	-	1660	9	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	221.962236371415	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841427	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28827615_28827739_28840950_28841012_28841373
ES.14751.73	chr17	-	2757	14	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_2	202.383255850183	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841427	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.74	chr17	-	2213	15	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	25	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	192.858201055298	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841400	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.75	chr17	-	2478	17	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	237.505518028003	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841392	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28831932_28831992_28840950_28841012_28841373
ES.14751.76	chr17	-	2860	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	1	1943	1	-1	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841460	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.77	chr17	-	2277	14	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	201.015351646667	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841490	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.78	chr17	-	2031	2	NIC	ENSMUSG00000004865.17	novel	1091	3	NA	NA	18	-1	intron_retention	FALSE	canonical	3	669	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28811519	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28810268_28811191
ES.14751.8	chr17	-	4091	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	29	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	245.358694341344	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841396	28806621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28808318_28808378_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.80	chr17	-	4191	15	NNC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	195.237897793164	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841435	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811818_28812343_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.84	chr17	-	2376	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	190.173908713986	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841427	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819865_28821735_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.85	chr17	-	2658	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	189.871254626216	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGGTTTCTATGCTCA	NA	False	NA	-3	True	ATTAAA	-38	NA	28841514	28808564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810385_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.86	chr17	-	1929	11	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-3	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	264.895375573074	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGATTCTATCTGTGG	NA	False	NA	-15	True	ATTAAA	-26	NA	28841428	28808576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818841_28819216_28819431_28819842_28819869_28821661_28821828_28840950_28841012_28841373
ES.14751.87	chr17	-	2081	15	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-7	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	196.337706256234	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGATTCTATCTGTGG	NA	False	NA	-15	True	ATTAAA	-26	NA	28841468	28808576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818656_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.88	chr17	-	2253	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-5	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	190.043316699699	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCTTCCTGGATTCTA	NA	False	NA	-22	True	ATTAAA	-19	NA	28841430	28808583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818659_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.89	chr17	-	2355	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	197	2101	-25	-159	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATCCATCCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	28841486	28808722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.90	chr17	-	6423	11	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	-10	-227	intron_retention	FALSE	canonical	3	554	junction_1	99.1367237707601	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCTGCCCTGCCAT	NA	False	NA	NA	False	ACTAAA	-13	NA	28841435	28808790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28821828_28822411_28822519_28824272_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.91	chr17	-	2080	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	289	2284	31	-342	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTCATTTGGGTTTG	NA	False	NA	NA	False	TTTAAA	-3	NA	28841394	28808905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.92	chr17	-	1054	9	NIC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	-10	97	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	253.536486526101	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCATTGCAGCAGTG	NA	False	NA	-20	True	AATAAA	-24	NA	28841471	28819212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_28819431_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14751.93	chr17	-	1065	10	ISM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	3	12593	-1	95	5prime_fragment	FALSE	canonical	3	656	junction_9	88.918328458212	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAGCATTGCAGCAG	NA	False	NA	-22	True	AATAAA	-22	NA	28841458	28819214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ES.14752.1	chr17	+	190	1	Intergenic	novelGene_12347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	28843209	28843399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28843200_28843400
ES.14753.1	chr17	+	275	1	Intergenic	novelGene_12348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAATAAATAAATCT	2659	False	NA	NA	False	NA	NA	NA	28850637	28850912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28850600_28850900
ES.14753.2	chr17	+	158	1	Intergenic	novelGene_12349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAGTTTAAA	2660	False	NA	NA	False	NA	NA	NA	28850638	28850796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28850600_28850800
ES.14754.1	chr17	-	171	1	Intergenic	novelGene_12350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGATTAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	28869809	28869638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28869600_28869800
ES.14755.1	chr17	-	160	1	Intergenic	novelGene_12351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCTAGT	2192	False	NA	NA	False	NA	NA	NA	28897518	28897358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28897400_28897500
ES.14756.1	chr17	+	3683	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	-134	-1	-121	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTCAGGTTTATTC	4943	False	NA	13	True	AATAAA	-20	NA	28910181	28967380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.11	chr17	+	3088	3	ISM	ENSMUSG00000053436.16	ENSMUST00000114758.9	1478	10	-17	23252	-12	-11063	5prime_fragment	FALSE	canonical	3	388	junction_2	18.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTGGACTCCAAGTAT	5163	False	NA	NA	False	NA	NA	NA	28910401	28936886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28910830_28932747_28932878_28934356
ES.14756.12	chr17	+	4576	11	ISM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	86	0	-12	0	intron_retention	FALSE	canonical	3	310	junction_9	34.6842903920492	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5163	False	NA	12	True	AATAAA	-19	NA	28910401	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956
ES.14756.13	chr17	+	3444	11	NNC	ENSMUSG00000053436.16	novel	3562	12	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_4	175.835832525683	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5163	False	NA	12	True	AATAAA	-19	NA	28910401	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943839_28944762_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964123_28965241
ES.14756.14	chr17	+	3373	11	FSM	ENSMUSG00000053436.16	ENSMUST00000233250.2	1066	11	-303	-2004	-3	0	multi-exon	FALSE	canonical	0	0	junction_9	118.632246880854	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5172	False	NA	11	True	AATAAA	-18	NA	28910410	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28963956_28964131_28965244
ES.14756.15	chr17	+	3495	13	NNC	ENSMUSG00000053436.16	novel	3592	13	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	165.230709917981	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5172	False	NA	11	True	AATAAA	-18	NA	28910410	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910827_28911728_28911775_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
ES.14756.16	chr17	+	3613	13	NNC	ENSMUSG00000053436.16	novel	3490	13	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	142.930125702503	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5178	False	NA	12	True	AATAAA	-19	NA	28910416	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28932747_28932878_28934356_28934487_28935334_28935430_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.18	chr17	+	1414	9	NNC	ENSMUSG00000053436.16	novel	1478	10	NA	NA	4	4774	intron_retention	FALSE	canonical	0	0	junction_8	129.295929943676	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5184	False	NA	NA	False	NA	NA	NA	28910422	28952723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28952282
ES.14756.2	chr17	+	3394	11	NIC	ENSMUSG00000053436.16	novel	3592	13	NA	NA	-8	0	intron_retention	FALSE	canonical	1	1	junction_10	115.603849416877	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5056	False	NA	11	True	AATAAA	-18	NA	28910294	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28965244
ES.14756.20	chr17	+	3423	11	NNC	ENSMUSG00000053436.16	novel	3548	12	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_4	118.182739856546	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5198	False	NA	12	True	AATAAA	-19	NA	28910436	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943839_28944753_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.21	chr17	+	3588	11	NIC	ENSMUSG00000053436.16	novel	3548	12	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	310	junction_8	37.9473319220206	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGGTTTCTCAGGTTT	5466	False	NA	9	True	AATAAA	-16	NA	28910704	28967376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.22	chr17	+	3152	13	NNC	ENSMUSG00000053436.16	novel	3592	13	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	165.621556567978	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5505	False	NA	11	True	AATAAA	-18	NA	28910743	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28911729_28911763_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
ES.14756.23	chr17	+	2153	2	Intergenic	novelGene_12352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAACCTTAAA	NA	False	NA	NA	False	NA	NA	NA	28921177	28923614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_28923290_28923573
ES.14756.24	chr17	+	4534	9	ISM	ENSMUSG00000053436.16	ENSMUST00000114752.3	3148	12	30488	-2	-5351	0	3prime_fragment	FALSE	canonical	3	310	junction_6	37.5064577772948	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTCAGGTTTATTC	NA	False	NA	13	True	AATAAA	-20	NA	28942029	28967380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.25	chr17	+	3587	4	ISM	ENSMUSG00000053436.16	ENSMUST00000114752.3	3148	12	43324	-1	-5727	0	3prime_fragment	FALSE	canonical	3	310	junction_1	47.1333804808816	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	1645	False	NA	12	True	AATAAA	-19	NA	28954865	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.26	chr17	+	4871	3	FSM	ENSMUSG00000053436.16	ENSMUST00000151613.2	509	3	-2315	-2047	-2315	0	multi-exon	FALSE	canonical	3	346	junction_1	38.5	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5057	False	NA	11	True	AATAAA	-18	NA	28958277	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28960841_28963956_28964131_28965244
ES.14756.27	chr17	+	5231	2	ISM	ENSMUSG00000053436.16	ENSMUST00000151613.2	509	3	441	-2047	441	0	3prime_fragment	FALSE	canonical	3	423	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	7813	False	NA	11	True	AATAAA	-18	NA	28961033	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28964131_28965244
ES.14756.28	chr17	+	5724	1	NIC	ENSMUSG00000053436.16	novel	3562	12	NA	NA	1063	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	8435	False	NA	12	True	AATAAA	-19	NA	28961655	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28961700_28967400
ES.14756.29	chr17	+	2154	2	NNC	ENSMUSG00000053436.16	novel	3562	12	NA	NA	4533	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	NA	False	NA	11	True	AATAAA	-18	NA	28965125	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28965146_28965244
ES.14756.3	chr17	+	1580	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	-16	1984	-3	21	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGTTGAAAGATTCCT	5061	False	NA	NA	False	NA	NA	NA	28910299	28965395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.4	chr17	+	3559	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	2	1	2	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5066	False	NA	12	True	AATAAA	-19	NA	28910304	28967379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
ES.14756.6	chr17	+	3648	13	NNC	ENSMUSG00000053436.16	novel	3592	13	NA	NA	17	0	intron_retention	FALSE	canonical	1	1	junction_3	142.749391903745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTCTCAGGTTTAT	5094	False	NA	11	True	AATAAA	-18	NA	28910332	28967378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28910830_28932747_28932878_28934356_28934487_28935334_28935382_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ES.14756.7	chr17	+	1548	11	ISM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	70	3058	-41	287	5prime_fragment	FALSE	canonical	3	53	junction_9	128.638446818982	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCCGTTTATGTAATAT	5134	False	NA	NA	False	NA	NA	NA	28910372	28964322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956
ES.14756.9	chr17	+	1520	11	ISM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	85	3057	-13	287	5prime_fragment	FALSE	canonical	3	310	junction_9	34.6842903920492	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCCGTTTATGTAATAT	5162	False	NA	NA	False	NA	NA	NA	28910400	28964322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956
ES.14757.1	chr17	-	3099	1	Intergenic	novelGene_12353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATAGTCTTTTGAAAC	2602	False	NA	NA	False	NA	NA	NA	28941235	28938136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28938100_28941200
ES.14758.1	chr17	-	213	1	Intergenic	novelGene_12354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	28952968	28952755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_28952800_28953000
ES.14759.1	chr17	+	1611	11	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	-24	198	intron_retention	FALSE	canonical	3	6	junction_1	28.1725043260268	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988246	28997676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28988565_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.10	chr17	+	5675	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15730	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	73.5222471999689	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29004333	29057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.101	chr17	+	6183	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15600	-8	intron_retention	FALSE	canonical	0	0	junction_6	94.946329868803	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTACCATAATATGATGT	NA	False	NA	30	True	AATAAA	-41	NA	29004463	29057459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735
ES.14759.102	chr17	+	6121	13	FSM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	-355	1403	-355	2	multi-exon	FALSE	canonical	0	0	junction_5	90.6136487143815	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29019708	29057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.103	chr17	+	8594	13	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	-316	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.9144584165147	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGATGTCTTATTTTC	NA	False	NA	39	True	AATACA	-21	NA	29019747	29057468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29022900_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.104	chr17	+	2459	2	ISM	ENSMUSG00000063952.17	ENSMUST00000233646.2	4497	11	-247	30219	20	1827	5prime_fragment	FALSE	canonical	3	34	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAGTCAGTTTAG	NA	False	NA	NA	False	NA	NA	NA	29020083	29027109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29020336_29024902
ES.14759.105	chr17	+	7364	14	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.135440525515	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29020088	29057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29020336_29022847_29024471_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.106	chr17	+	5482	11	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	25	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	112.997168106108	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAAGAGTTAATTTTA	NA	False	NA	12	True	AATAAA	-23	NA	29020088	29057441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036169_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29054735_29054891_29055483
ES.14759.107	chr17	+	5724	13	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.6136487143815	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29020099	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036163_29036453_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.108	chr17	+	5739	13	NIC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	90.6136487143815	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29020100	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.109	chr17	+	3537	8	ISM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	39	18065	39	612	5prime_fragment	FALSE	canonical	0	0	junction_5	109.831596509551	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGGTCTCTAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	29020102	29040858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059
ES.14759.11	chr17	+	5603	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15729	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.894288382911	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAAGAGTTAATTTTA	NA	False	NA	12	True	AATAAA	-23	NA	29004334	29057441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.110	chr17	+	5553	13	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.6136487143815	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29020102	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036628_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.111	chr17	+	7010	1	NIC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	40	1831	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCAGTTTAGTAGC	NA	False	NA	NA	False	NA	NA	NA	29020103	29027113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29020100_29027100
ES.14759.112	chr17	+	6705	12	ISM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	3621	1410	-1218	-2	3prime_fragment	FALSE	canonical	0	0	junction_4	74.8308284904155	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29023684	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.113	chr17	+	4307	12	NNC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	1067	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.8308284904155	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29026079	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29026374_29029486_29029644_29033559_29033692_29036038_29036163_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.114	chr17	+	4543	1	NIC	ENSMUSG00000063952.17	novel	7169	13	NA	NA	1390	-691	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAGAGATCT	NA	False	NA	NA	False	NA	NA	NA	29030914	29035457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29030900_29035500
ES.14759.115	chr17	+	3663	8	ISM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	16248	1493	-998	-37	3prime_fragment	FALSE	canonical	3	254	junction_4	8.34950811211569	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCTGTAAAGAATACAAG	3639	False	NA	1	True	AATAAA	-12	NA	29036311	29057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.116	chr17	+	3400	4	NIC	ENSMUSG00000063952.17	novel	4525	10	NA	NA	-1555	-29	intron_retention	FALSE	canonical	0	0	junction_2	121.150961843295	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATACAAGAGTTAATT	7385	False	NA	9	True	AATAAA	-20	NA	29040057	29057438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29040567_29042946_29043041_29050291_29050386_29054735
ES.14759.117	chr17	+	2387	4	FSM	ENSMUSG00000063952.17	ENSMUST00000127007.2	895	4	258	-1750	258	0	multi-exon	FALSE	canonical	3	257	junction_2	4.71404520791032	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	97	False	NA	4	True	AATAAA	-13	NA	29047313	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.118	chr17	+	749	2	NNC	ENSMUSG00000063952.17	novel	5046	9	NA	NA	8131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	7970	False	NA	7	True	AATAAA	-16	NA	29055186	29057518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29055533_29057115
ES.14759.119	chr17	+	1206	1	Intergenic	novelGene_12361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAAAGAAATTGA	NA	False	NA	NA	False	NA	NA	NA	29125794	29127000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29125800_29127000
ES.14759.12	chr17	+	5869	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15705	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0668937417979	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004358	29057518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.120	chr17	+	4007	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	-152	-2	12	2	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGTTATTTAATAGAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	29171243	29188525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.121	chr17	+	4001	7	NIC	ENSMUSG00000005936.20	novel	2534	8	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	196.672033825068	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29171408	29188521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29181620_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.123	chr17	+	4024	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	185	-13	-9	13	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGAAAAGAAAATCACAA	NA	False	NA	NA	False	AATAAA	-29	NA	29171416	29188536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.124	chr17	+	2229	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	24	1600	-6	12	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAGTGTGCTCTTAA	NA	False	NA	22	True	AATAAA	-33	NA	29171419	29186923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.125	chr17	+	3697	8	NNC	ENSMUSG00000005936.20	novel	4196	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	183.384729963194	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171420	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625_29187194_29187324
ES.14759.126	chr17	+	4165	6	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	347	junction_1	61.8016181017941	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTGTTATTTAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	29171420	29188522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29181783_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.127	chr17	+	2413	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	189	1594	-5	18	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGCTCTTAAAACAGT	NA	False	NA	28	True	AATAAA	-39	NA	29171420	29186929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.128	chr17	+	3781	7	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	196.672033825068	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171420	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180615_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.129	chr17	+	3554	6	FSM	ENSMUSG00000005936.20	ENSMUST00000232874.2	3530	6	-24	0	-5	0	multi-exon	FALSE	canonical	1	3	junction_1	212.274727652634	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171420	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.13	chr17	+	2643	4	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15701	1834	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	30.3461511379761	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAGTTTAGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	29004362	29027116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902
ES.14759.130	chr17	+	942	3	NNC	ENSMUSG00000005936.20	novel	1861	7	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	173.5	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCTCTCCAGTATTG	NA	False	NA	2	True	AATAAA	-13	NA	29171420	29186903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29171544_29180387_29180418_29186114
ES.14759.131	chr17	+	6354	4	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	347	junction_1	104.404129335109	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171420	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29181887_29182224_29184059_29185625
ES.14759.132	chr17	+	3723	6	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	194.454519104083	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29171420	29188521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.133	chr17	+	3140	5	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	-2	8	intron_retention	FALSE	canonical	3	347	junction_1	64.0429543353521	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGAACAAGTGTGCTC	NA	False	NA	18	True	AATAAA	-29	NA	29171431	29186919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29181783_29183133_29183947_29184059_29185625
ES.14759.134	chr17	+	2808	6	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	0	16	intron_retention	FALSE	canonical	3	347	junction_1	81.5180961504867	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTGTGCTCTTAAAACA	NA	False	NA	26	True	AATAAA	-37	NA	29171433	29186927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29183133_29183947_29184059_29185625
ES.14759.135	chr17	+	4629	6	NIC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	347	junction_1	81.8549937389284	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171434	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29184059_29185625
ES.14759.136	chr17	+	3725	7	NNC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.672033825068	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTGTTATTTAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	29171442	29188522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29171544_29180387_29180582_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.137	chr17	+	3426	5	FSM	ENSMUSG00000005936.20	ENSMUST00000150858.2	938	5	-33	-2455	1	-2	multi-exon	FALSE	canonical	1	2	junction_1	216.20288504088	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29171443	29188521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.138	chr17	+	4576	1	FSM	ENSMUSG00000005936.20	ENSMUST00000232980.2	3301	1	-207	-1068	-1	1068	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTAGCTCTGCTCCAAC	NA	False	NA	NA	False	NA	NA	NA	29171452	29176028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171500_29176000
ES.14759.139	chr17	+	3693	7	FSM	ENSMUSG00000005936.20	ENSMUST00000233145.2	1534	7	229	-2388	0	0	multi-exon	FALSE	canonical	0	0	junction_2	216.240349816793	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171460	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29176852_29177032_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.14	chr17	+	5817	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15701	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.7993317666208	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29004362	29057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.140	chr17	+	1793	5	FSM	ENSMUSG00000005936.20	ENSMUST00000150858.2	938	5	-14	-841	2	2	multi-exon	FALSE	canonical	1	2	junction_1	216.20288504088	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCTCCAGTATTGAAGA	NA	False	NA	6	True	AATAAA	-17	NA	29171462	29186907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.141	chr17	+	2996	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	73	784	8	-653	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCCAATTATTC	NA	False	NA	NA	False	NA	NA	NA	29171468	29187739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.142	chr17	+	3740	7	NNC	ENSMUSG00000005936.20	novel	3853	7	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.672033825068	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCTTGTTATTTAAT	NA	False	NA	NA	False	AATAAA	-12	NA	29171495	29188519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29171544_29180387_29180653_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.143	chr17	+	4060	8	NIC	ENSMUSG00000005936.20	novel	2162	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	202.145431583808	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171555	29188523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171732_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.144	chr17	+	3821	7	FSM	ENSMUSG00000005936.20	ENSMUST00000117672.9	2162	7	-40	-1619	-40	-1	multi-exon	FALSE	canonical	3	11	junction_1	191.759760000777	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTGTTATTTAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	29171614	29188522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29171732_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.145	chr17	+	3771	7	NNC	ENSMUSG00000005936.20	novel	2162	7	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.672930953294	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29171645	29188521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29171732_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185643
ES.14759.146	chr17	+	2338	8	NIC	ENSMUSG00000005936.20	novel	2162	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	202.145431583808	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCTCTCCAGTATTG	NA	False	NA	2	True	AATAAA	-13	NA	29171657	29186903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29171732_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.147	chr17	+	5274	6	ISM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	7421	2	6627	-2	3prime_fragment	FALSE	canonical	3	466	junction_4	47.1788088022578	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTTGTTATTTAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	29178816	29188521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.148	chr17	+	2085	6	ISM	ENSMUSG00000005936.20	ENSMUST00000168507.2	2400	8	8197	9	8197	-1	3prime_fragment	FALSE	canonical	3	466	junction_4	47.1788088022578	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCCTCTCTCCAGTATT	NA	False	NA	1	True	AATAAA	-12	NA	29180386	29186902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.149	chr17	+	1833	5	ISM	ENSMUSG00000005936.20	ENSMUST00000168507.2	2400	8	9592	-12	9592	12	3prime_fragment	FALSE	canonical	3	466	junction_3	46.8368177825949	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAGTGTGCTCTTAA	NA	False	NA	22	True	AATAAA	-33	NA	29181781	29186923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ES.14759.15	chr17	+	5807	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15696	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.100534960482	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCTGTAAAGAATACAAG	NA	False	NA	1	True	AATAAA	-12	NA	29004367	29057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024923_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.16	chr17	+	5739	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15693	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.27454533064	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004370	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.17	chr17	+	3648	8	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15693	812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.8149048272116	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGAGGGCAGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	29004370	29041058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059
ES.14759.2	chr17	+	1528	11	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	-3	198	intron_retention	FALSE	canonical	3	77	junction_10	10.3580886267689	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988267	28997676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.20	chr17	+	5914	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15692	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.6815554306936	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGCTGTTTGCTGT	NA	False	NA	9	True	AATAAA	-18	NA	29004371	29057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.21	chr17	+	5434	11	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15692	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.597293271032	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004371	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29054735_29054891_29055483
ES.14759.22	chr17	+	5840	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15692	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.6815554306936	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTGTAAAGAATACAAGA	NA	False	NA	2	True	AATAAA	-13	NA	29004371	29057431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.23	chr17	+	3850	10	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15692	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	114.873306486798	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATATGATGTCTTATTT	NA	False	NA	37	True	AATACA	-19	NA	29004371	29057466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040219_29056529
ES.14759.24	chr17	+	5624	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.5222471999689	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004372	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036466_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.25	chr17	+	5340	10	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15690	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.686234897992	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004373	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29054735_29054891_29055483
ES.14759.26	chr17	+	5527	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15689	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.5222471999689	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAGAAAAACCTATG	NA	False	NA	-16	True	NA	NA	NA	29004374	29057413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.28	chr17	+	5646	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15689	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.098437667957	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCGGTGCTGTT	NA	False	NA	3	True	AATAAA	-12	NA	29004374	29057514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004533_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.3	chr17	+	1392	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	14	1531	14	198	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988284	28997676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.30	chr17	+	7960	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15687	0	intron_retention	FALSE	non_canonical	0	0	junction_5	76.3104793340885	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATGATGTCTTATTTT	NA	False	NA	38	True	AATACA	-20	NA	29004376	29057467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036169_29036459_29036773_29037309_29037613_29040059_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.31	chr17	+	5642	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15686	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.779352794906	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004377	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040039_29040567_29042946_29043041_29047317_29047416_29050291_29050386_29054735_29054891_29055483
ES.14759.32	chr17	+	5786	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15681	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0668937417979	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATATGATGTCTTATTT	NA	False	NA	37	True	AATACA	-19	NA	29004382	29057466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036466_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.33	chr17	+	2338	2	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15680	1827	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAGTCAGTTTAG	NA	False	NA	NA	False	NA	NA	NA	29004383	29027109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902
ES.14759.34	chr17	+	4025	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15672	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.165481089665	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCGGTGCTGTT	NA	False	NA	3	True	AATAAA	-12	NA	29004391	29057514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29025843_29040186_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.35	chr17	+	1640	4	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15672	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.1872140511882	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATGATGTCTTATTTT	NA	False	NA	38	True	AATACA	-20	NA	29004391	29057467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29025113_29056266
ES.14759.36	chr17	+	4296	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15672	-38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.576956405076	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCTGTAAAGAATACAA	NA	False	NA	0	True	AATAAA	-11	NA	29004391	29057429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040491_29056192
ES.14759.37	chr17	+	3124	5	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15671	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.982498468482	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGATGTCTTATTTTC	NA	False	NA	39	True	AATACA	-21	NA	29004392	29057468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033651_29056185
ES.14759.38	chr17	+	5526	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15671	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.2670346677529	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004392	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.39	chr17	+	1592	2	Genic_Genomic	ENSMUSG00000063952.17	novel	7169	13	NA	NA	-15671	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004392	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_29004515_29056043
ES.14759.4	chr17	+	1762	10	NIC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	14	196	intron_retention	FALSE	canonical	3	6	junction_1	28.8615255023186	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCAATGCCCCTTTTC	NA	False	NA	8	True	NA	NA	NA	28988284	28997674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_28988565_28988984_28989115_28990131_28990191_28994227_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.40	chr17	+	6003	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15669	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.6815554306936	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004394	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036285_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.41	chr17	+	3770	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15669	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.576956405076	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004394	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040219_29056529
ES.14759.42	chr17	+	5663	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15669	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.0154145077673	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCGGTGCTGTTTGCTG	NA	False	NA	8	True	AATAAA	-17	NA	29004394	29057519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.43	chr17	+	5622	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15669	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.5222471999689	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004394	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.44	chr17	+	5658	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15668	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	108.158605869661	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004395	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29022847_29022900_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.45	chr17	+	7681	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15667	-38	intron_retention	FALSE	canonical	0	0	junction_5	97.5140591685998	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCTGTAAAGAATACAA	NA	False	NA	0	True	AATAAA	-11	NA	29004396	29057429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037393_29040059_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.46	chr17	+	4939	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15667	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.838437858854	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGCGGTGCTGTTTG	NA	False	NA	5	True	AATAAA	-14	NA	29004396	29057516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483_29056017_29056587
ES.14759.47	chr17	+	3927	11	NNC	ENSMUSG00000063952.17	novel	2326	4	NA	NA	-15666	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.687344029735	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGATGTCTTAT	NA	False	NA	35	True	AATACA	-17	NA	29004397	29057464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.48	chr17	+	5774	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15666	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	114.230121728287	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004397	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033568_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29050287_29050386_29054735_29054891_29055483
ES.14759.49	chr17	+	6369	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15665	0	intron_retention	FALSE	canonical	0	0	junction_6	95.4953096579443	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004398	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735
ES.14759.5	chr17	+	3883	4	NNC	ENSMUSG00000004864.14	novel	621	6	NA	NA	15	179703	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	40.5736641458745	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAAAAGAACTGT	NA	False	NA	NA	False	NA	NA	NA	28988285	29178910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28988503_28988984_28989115_28990131_28993553_29178795
ES.14759.50	chr17	+	5677	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15664	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	107.365516655333	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004399	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.51	chr17	+	5506	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15664	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.2670346677529	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004399	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.52	chr17	+	2458	3	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15664	1792	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	33	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004399	29027074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902
ES.14759.53	chr17	+	5431	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15664	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.1654991171812	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004399	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036628_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050291_29050386_29054735_29054891_29055483
ES.14759.54	chr17	+	3591	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15663	614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	107.144470225952	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTCTCTAGCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	29004400	29040860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059
ES.14759.55	chr17	+	2335	3	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15660	1792	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29004403	29027074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29022847_29022900_29024902
ES.14759.56	chr17	+	2410	5	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15660	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.7881562168038	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGCGGTGCTGTTTG	NA	False	NA	5	True	AATAAA	-14	NA	29004403	29057516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026031_29056566
ES.14759.57	chr17	+	4190	13	NNC	ENSMUSG00000063952.17	novel	4525	10	NA	NA	-15658	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.811474740762	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004405	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.59	chr17	+	5879	16	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15658	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.963009764634	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATGATGTCTTATTTT	NA	False	NA	38	True	AATACA	-20	NA	29004405	29057467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29022847_29022900_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.6	chr17	+	1364	11	NNC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	-9	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.3523423256135	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28988300	28997676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28995090_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.60	chr17	+	4613	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15658	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.847975160591	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004405	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29025170_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.61	chr17	+	4131	11	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	-5949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	102.003970510956	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACAGGGTTTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	29004407	29048854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036169_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29048050
ES.14759.62	chr17	+	11737	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	1	intron_retention	FALSE	canonical	3	175	junction_1	29.2147223159831	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCGGTGCTGTTTGCTG	NA	False	NA	8	True	AATAAA	-17	NA	29004407	29057519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036773_29037309_29037613_29040059_29043041_29047317_29050386_29054735
ES.14759.63	chr17	+	5505	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.394895015972	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATACAAGAGTTAATT	NA	False	NA	9	True	AATAAA	-20	NA	29004407	29057438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029520_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040039_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.67	chr17	+	5583	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	110.50118730898	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004407	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29054735_29054891_29055483
ES.14759.68	chr17	+	5356	11	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	115.041557708508	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004407	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29054735_29054891_29055483
ES.14759.69	chr17	+	3262	9	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.165481089665	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGATGTCTTATTTTCT	NA	False	NA	40	True	AATACA	-22	NA	29004407	29057469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29025172_29040217_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.7	chr17	+	3125	12	NNC	ENSMUSG00000004864.14	novel	2937	12	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	36.53889583842	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTATTATATCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	28988312	28999205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_28988503_28988984_28989115_28990131_28990191_28990635_28990749_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.70	chr17	+	1461	3	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15656	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.5	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004407	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29024949_29056205
ES.14759.71	chr17	+	5696	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.6923457271682	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCGGTGCTGTT	NA	False	NA	3	True	AATAAA	-12	NA	29004407	29057514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029385_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.72	chr17	+	5988	17	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.241204360924	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATAATATGATGTCTTA	NA	False	NA	34	True	AATAAA	-45	NA	29004407	29057463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29022847_29022900_29024355_29024471_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.74	chr17	+	5557	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15655	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.9926212442047	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGAGTTAATTTTACCT	NA	False	NA	15	True	AATAAA	-26	NA	29004408	29057444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054924_29055483
ES.14759.75	chr17	+	6101	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15653	-37	intron_retention	FALSE	canonical	0	0	junction_5	76.3104793340885	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCTGTAAAGAATACAAG	NA	False	NA	1	True	AATAAA	-12	NA	29004410	29057430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735
ES.14759.76	chr17	+	9049	11	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15651	0	intron_retention	FALSE	canonical	0	0	junction_5	78.9430807607608	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004412	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036466_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29050386_29054735
ES.14759.77	chr17	+	5489	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15649	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.4114558742307	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004414	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29050287_29050386_29054735_29054891_29055483
ES.14759.78	chr17	+	5585	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15644	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.7993317666208	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004419	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036167_29036628_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.79	chr17	+	5535	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15644	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	109.094091651809	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCGGTGCTGTT	NA	False	NA	3	True	AATAAA	-12	NA	29004419	29057514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.8	chr17	+	1330	4	ISM	ENSMUSG00000004864.14	ENSMUST00000233676.2	1127	12	7353	-198	7344	198	3prime_fragment	FALSE	canonical	3	77	junction_3	11.0855260988773	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAATGCCCCTTTTCTG	NA	False	NA	10	True	NA	NA	NA	28995736	28997676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_28996536_28996696_28996776_28997050_28997228_28997401
ES.14759.80	chr17	+	6602	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15644	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.0154145077673	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTGCTGCATAAACAG	NA	False	NA	NA	False	AATAAA	-22	NA	29004419	29058483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.81	chr17	+	5702	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15643	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0668937417979	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAGAAAAACCTATG	NA	False	NA	-16	True	NA	NA	NA	29004420	29057413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.82	chr17	+	5518	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15643	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.27454533064	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGTGTGCGGTGCTGT	NA	False	NA	2	True	AATAAA	-11	NA	29004420	29057513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036628_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.84	chr17	+	5681	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.27454533064	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004421	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036466_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.85	chr17	+	5634	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0668937417979	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004421	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036628_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.86	chr17	+	5804	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.713962640721	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004421	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029385_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.87	chr17	+	2750	5	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15642	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.2549211327163	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGAATACAAGAGTTAA	NA	False	NA	7	True	AATAAA	-18	NA	29004421	29057436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029574_29056508
ES.14759.88	chr17	+	2416	3	NNC	ENSMUSG00000063952.17	novel	4046	9	NA	NA	-15642	1837	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	24.5	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTTAGTAGCTGGGGG	NA	False	NA	NA	False	NA	NA	NA	29004421	29027119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902
ES.14759.89	chr17	+	5895	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.87189023937	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004421	29057518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054924_29055483
ES.14759.91	chr17	+	5804	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.019255177232	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTGTGCGGTGCTGTT	NA	False	NA	3	True	AATAAA	-12	NA	29004421	29057514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29022847_29022900_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ES.14759.92	chr17	+	5499	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.4114558742307	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004421	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29050287_29050386_29054735_29054891_29055483
ES.14759.93	chr17	+	5728	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15641	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	116.302401182048	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGCGGTGCTGTTT	NA	False	NA	4	True	AATAAA	-13	NA	29004422	29057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036466_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29044242_29044401_29047317_29047416_29050291_29050386_29054735_29054891_29055483
ES.14759.95	chr17	+	6092	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15640	1	intron_retention	FALSE	canonical	0	0	junction_6	107.268614028315	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGATGTCTTATTTTC	NA	False	NA	39	True	AATACA	-21	NA	29004423	29057468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036444_29036773_29037309_29037393_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735
ES.14759.97	chr17	+	5618	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15632	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.568254651225	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATACAAGAGTTAATT	NA	False	NA	9	True	AATAAA	-20	NA	29004431	29057438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ES.14759.98	chr17	+	8548	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15628	-1	intron_retention	FALSE	canonical	0	0	junction_6	94.4395750378692	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTGCGGTGCTGTTTGC	NA	False	NA	6	True	AATAAA	-15	NA	29004435	29057517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29050386_29054735_29054891_29055483
ES.14759.99	chr17	+	4605	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15615	-5589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.837159982823	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGAGCAGATGATGCA	NA	False	NA	NA	False	AATAAA	-14	NA	29004448	29049214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29048050
ES.1476.1	chr1	+	235	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTATTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	136617182	136617417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136617200_136617400
ES.14760.1	chr17	-	2319	4	Antisense	novelGene_ENSMUSG00000004864.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAT	9139	False	NA	NA	False	NA	NA	NA	28998974	28996045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28996535_28996695_28996774_28997048_28997226_28997399
ES.14761.1	chr17	-	192	1	Antisense	novelGene_ENSMUSG00000004864.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGGGCTTGTCAGAGC	8739	False	NA	NA	False	NA	NA	NA	28999374	28999182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_28999200_28999400
ES.14762.1	chr17	-	176	1	Intergenic	novelGene_12355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATAAATAAAT	4809	False	NA	NA	False	NA	NA	NA	29003304	29003128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29003100_29003300
ES.14763.1	chr17	-	1932	2	Intergenic	novelGene_12356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTCTGGCATCTG	NA	False	NA	NA	False	NA	NA	NA	29009137	29005003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29006338_29008539
ES.14763.2	chr17	-	2900	1	Intergenic	novelGene_12357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTATAGCTTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	29009137	29006237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29006200_29009100
ES.14764.1	chr17	-	3581	9	Intergenic	novelGene_12358	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGTTTGGTCAA	629	False	NA	NA	False	NA	NA	NA	29056112	29033030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29033694_29036041_29036166_29036457_29036772_29037308_29037611_29040057_29040564_29042943_29043034_29047310_29047411_29050280_29050385_29054734
ES.14765.1	chr17	-	163	1	Intergenic	novelGene_12359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGATTAATCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	29061059	29060896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29060900_29061100
ES.14766.1	chr17	-	159	1	Intergenic	novelGene_12360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	29105320	29105161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29105200_29105300
ES.14767.1	chr17	-	5533	1	Antisense	novelGene_ENSMUSG00000043286.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTCTTGGCTCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	29114238	29108705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29108700_29114200
ES.14768.1	chr17	-	4329	11	NIC	ENSMUSG00000048905.6	novel	4597	12	NA	NA	-4005	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.26955654485436	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCGGATCTTTTCAGGGA	NA	False	NA	0	True	AATAAA	-19	NA	29128679	29115361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29117898_29118456_29118721_29120104_29120170_29120923_29121050_29121746_29121997_29122220_29122283_29123489_29123625_29124228_29124470_29124613_29124730_29127241_29127362_29128265
ES.14768.3	chr17	-	4283	11	ISM	ENSMUSG00000048905.6	ENSMUST00000062357.6	4597	12	5610	0	-4014	0	3prime_fragment	FALSE	canonical	1	1	junction_8	3.37638860322683	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAACCGGATCTTTTCA	NA	False	NA	-4	True	AATAAA	-15	NA	29128688	29115365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29117898_29118456_29118721_29120104_29120170_29120923_29121050_29121746_29121997_29122220_29122283_29123489_29123625_29124228_29124470_29124664_29124730_29127241_29127362_29128265
ES.14768.5	chr17	-	177	1	Intergenic	novelGene_12362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	29126741	29126564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29126600_29126700
ES.14769.1	chr17	-	185	1	Intergenic	novelGene_12363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAATAAAAAGATA	5675	False	NA	NA	False	NA	NA	NA	29143307	29143122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29143100_29143300
ES.1477.1	chr1	-	181	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	136617621	136617440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136617400_136617600
ES.14770.1	chr17	-	177	1	Intergenic	novelGene_12364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATTATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29149211	29149034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29149000_29149200
ES.14771.1	chr17	-	1416	3	NNC	ENSMUSG00000045378.6	novel	1019	3	NA	NA	154	1	intron_retention	FALSE	canonical	2	3	junction_2	12.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTGTGTGTCTCTT	6367	False	NA	0	True	AATAAA	-16	NA	29161084	29152959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29153781_29160215_29160344_29160617
ES.14772.1	chr17	-	231	1	Intergenic	novelGene_12365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAAGCATGCAGGAGG	NA	False	NA	NA	False	AAGAAA	-35	NA	29168772	29168541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29168500_29168800
ES.14773.1	chr17	-	4479	1	Antisense	novelGene_ENSMUSG00000005936.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATACTGAAACAAGAAGTT	5367	False	NA	NA	False	NA	NA	NA	29178652	29174173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29174200_29178700
ES.14773.2	chr17	-	1037	1	Intergenic	novelGene_12366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5367	False	NA	NA	False	NA	NA	NA	29178652	29177615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29177600_29178700
ES.14773.3	chr17	-	882	1	Intergenic	novelGene_12367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCCCACTGAACCCA	5366	False	NA	NA	False	NA	NA	NA	29178653	29177771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29177800_29178700
ES.14774.1	chr17	+	1194	1	Antisense	novelGene_ENSMUSG00000024006.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCAGAGAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	29210969	29212163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_29211000_29212200
ES.14775.1	chr17	+	183	1	Intergenic	novelGene_12369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29212934	29213117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29212900_29213100
ES.14776.1	chr17	+	324	1	Intergenic	novelGene_12371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTATATAAACAATAA	NA	False	NA	NA	False	TTTAAA	-12	NA	29222283	29222607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29222300_29222600
ES.14777.1	chr17	-	3426	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	-75	0	-75	0	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29227044	29189853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.10	chr17	-	9216	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	678	junction_3	47.2793701626323	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29226972	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.11	chr17	-	5338	15	NNC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	297.704414423681	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAACTGTGGTGGATTTC	NA	False	NA	-4	True	AATAAA	-15	NA	29226918	29189859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199733_29200003_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ES.14777.12	chr17	-	5215	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	30	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	268.345050870201	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226797	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199705_29199973_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.14	chr17	-	5621	8	NNC	ENSMUSG00000024006.18	novel	2778	13	NA	NA	-619	-7	intron_retention	TRUE	non_canonical	0	0	junction_7	270.033180123012	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29201779	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29199719_29199985
ES.14777.17	chr17	-	5354	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-1	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	268.345050870201	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226926	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199747_29200005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.18	chr17	-	4941	9	NIC	ENSMUSG00000024006.18	novel	2778	13	NA	NA	-35	-7	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	324.01466016216	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29202755	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199497_29201005
ES.14777.19	chr17	-	3159	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	219.984642772071	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226917	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29226684
ES.14777.20	chr17	-	6349	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	678	junction_3	53.8252452367231	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226935	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29194911_29196513_29196576_29198176_29198280_29201005_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.21	chr17	-	3343	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	209.631008592034	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226923	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201206_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.22	chr17	-	3410	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	275.078328362475	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226967	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29217822_29217891_29218982_29219116_29226684
ES.14777.24	chr17	-	3078	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	227.003840940309	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226923	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.25	chr17	-	3381	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	272.342530798318	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226962	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29217824_29217869_29218982_29219116_29226684
ES.14777.26	chr17	-	3280	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	208.930383921161	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226912	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203179_29207162_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.28	chr17	-	3400	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	272.095243303832	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226937	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29219797_29219886_29226684
ES.14777.29	chr17	-	3220	13	NIC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	256.327535695164	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226966	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ES.14777.3	chr17	-	5235	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	3	-3	intron_retention	FALSE	canonical	3	678	junction_3	51.8456576988104	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTGGTGGATTTCTTT	NA	False	NA	-1	True	AATAAA	-18	NA	29226966	29189856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.30	chr17	-	3366	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	209.631008592034	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGTGGTGGATTT	NA	False	NA	-5	True	AATAAA	-14	NA	29226925	29189860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201227_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.31	chr17	-	3290	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	268.345050870201	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226839	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29198771_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.32	chr17	-	2494	1	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-304	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	860	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29192355	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29189900_29192400
ES.14777.34	chr17	-	4414	3	NNC	ENSMUSG00000024006.18	novel	2778	13	NA	NA	-1110	-8	intron_retention	FALSE	canonical	0	0	junction_2	372	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29194803	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29193352_29193511
ES.14777.36	chr17	-	3447	15	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	268.032171386121	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226970	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29217765_29217869_29218982_29219116_29226684
ES.14777.37	chr17	-	3550	16	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	304.841700267897	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226945	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29198771_29199342_29199497_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.38	chr17	-	3441	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	701	junction_10	48.0274805594556	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226899	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.4	chr17	-	3248	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	221.04084589857	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29226923	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29218982_29219116_29226684
ES.14777.40	chr17	-	3117	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	2	38	junction_10	218.737436475109	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226918	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29218982_29219116_29226684
ES.14777.41	chr17	-	5362	15	NNC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	-9	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	297.704414423681	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGAACTGTGGTGGATT	NA	False	NA	-6	True	AATAAA	-13	NA	29226948	29189861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199747_29200021_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ES.14777.42	chr17	-	5554	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	2	-9	intron_retention	FALSE	canonical	3	678	junction_2	53.777318638995	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCGAACTGTGGTGGAT	NA	False	NA	-7	True	AATAAA	-12	NA	29226923	29189862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.43	chr17	-	3399	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	274.391134874943	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCGAACTGTGGTGGAT	NA	False	NA	-7	True	AATAAA	-12	NA	29226914	29189862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29214766_29214879_29218982_29219116_29226684
ES.14777.44	chr17	-	4461	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	678	junction_2	52.8709119775074	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCGAACTGTGGTGGAT	NA	False	NA	-7	True	AATAAA	-12	NA	29226946	29189862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.45	chr17	-	6171	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	3	-9	intron_retention	FALSE	canonical	3	678	junction_3	50.3649491131834	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCGAACTGTGGTGGAT	NA	False	NA	-7	True	AATAAA	-12	NA	29226912	29189862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29203175_29207151_29207236_29210271_29211443_29218982_29219116_29226684
ES.14777.46	chr17	-	4924	2	ISM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	24510	-828	-1462	-10	intron_retention	FALSE	canonical	3	744	junction_1	0	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCGAACTGTGGTGGA	NA	False	NA	-8	True	AATAAA	-11	NA	29195155	29189863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29191651_29192018
ES.14777.48	chr17	-	5630	14	NIC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	24	junction_7	252.542104990236	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCGAACTGTGGTGGA	NA	False	NA	-8	True	AATAAA	-11	NA	29226943	29189863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ES.14777.49	chr17	-	5384	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-1	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	268.345050870201	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCGAACTGTGGTGGA	NA	False	NA	-8	True	AATAAA	-11	NA	29226926	29189863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199657_29199882_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.5	chr17	-	5166	3	ISM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	23131	-833	2185	-5	intron_retention	FALSE	canonical	3	744	junction_1	40	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29196534	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29191651_29192018_29192114_29193255
ES.14777.50	chr17	-	3326	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.169576033141	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCGAACTGTGGTGGA	NA	False	NA	-8	True	AATAAA	-11	NA	29226946	29189863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193511_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.52	chr17	-	3208	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	211.069017568934	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAATCGAACTGTGGTGG	NA	False	NA	-9	True	AATAAA	-10	NA	29226945	29189864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207221_29210364_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.54	chr17	-	4449	8	NNC	ENSMUSG00000024006.18	novel	2778	13	NA	NA	537	-15	intron_retention	FALSE	non_canonical	0	0	junction_7	270.033180123012	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGATAATCGAACTGTG	NA	False	NA	-13	True	AATAAA	-6	NA	29200623	29189868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29199747_29200021
ES.14777.55	chr17	-	3035	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	-15	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	293.236203553347	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGATAATCGAACTGTG	NA	False	NA	-13	True	AATAAA	-6	NA	29226925	29189868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29226684
ES.14777.56	chr17	-	5587	8	NNC	ENSMUSG00000024006.18	novel	2778	13	NA	NA	-603	-15	intron_retention	TRUE	non_canonical	0	0	junction_7	270.033180123012	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGATAATCGAACTGTG	NA	False	NA	-13	True	AATAAA	-6	NA	29201763	29189868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29199733_29200009
ES.14777.57	chr17	-	5450	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	-9	-15	intron_retention	FALSE	canonical	3	23	junction_8	274.08190179012	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGATAATCGAACTGTG	NA	False	NA	-13	True	AATAAA	-6	NA	29226895	29189868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.59	chr17	-	3202	13	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	3	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	291.052543938948	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGATAATCGAACTGTG	NA	False	NA	-13	True	AATAAA	-6	NA	29226966	29189868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29217824_29217869_29218982_29219116_29226684
ES.14777.6	chr17	-	3244	14	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	317.645535763581	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29226903	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29219797_29219886_29226684
ES.14777.60	chr17	-	1581	12	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	518	combination_of_known_junctions	FALSE	canonical	2	38	junction_10	218.737436475109	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGATTGTAAGTGGA	NA	False	NA	NA	False	AATACA	-17	NA	29226915	29191394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29218982_29219116_29226684
ES.14777.61	chr17	-	1786	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	23	1542	-7	517	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTGATTGTAAGTGG	NA	False	NA	NA	False	AATACA	-16	NA	29226946	29191395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.62	chr17	-	177	1	Intergenic	novelGene_12368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	711	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTTAAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	29207990	29207813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29207800_29208000
ES.14777.63	chr17	-	157	1	Intergenic	novelGene_12370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	704	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTATCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	29215599	29215442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29215400_29215600
ES.14777.64	chr17	-	3326	1	FSM	ENSMUSG00000024006.18	ENSMUST00000233723.2	820	1	-94	-2412	-3	2412	mono-exon	FALSE	NA	NA	NA	NA	NA	685	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29226935	29223609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29223600_29226900
ES.14777.7	chr17	-	4111	15	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	265.733217451531	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29226931	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29198693_29199497_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ES.14777.9	chr17	-	3474	16	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	340.977979086952	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAACTGTGGTGGATTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	29226938	29189858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29202856_29202928_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29219797_29219886_29226684
ES.14778.1	chr17	+	181	1	Intergenic	novelGene_12372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	29230438	29230619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29230400_29230600
ES.14779.1	chr17	+	246	1	Intergenic	novelGene_12373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTACATTTACGGCA	NA	False	NA	NA	False	NA	NA	NA	29242783	29243029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29242800_29243000
ES.1478.1	chr1	-	742	1	Antisense	novelGene_ENSMUSG00000097113.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	136619011	136618269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_136618300_136619000
ES.14780.1	chr17	+	174	1	Intergenic	novelGene_12374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTACTCGTG	NA	False	NA	NA	False	NA	NA	NA	29246877	29247051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29246900_29247100
ES.14781.1	chr17	+	179	1	Intergenic	novelGene_12375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	29249640	29249819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29249600_29249800
ES.14782.1	chr17	-	286	1	FSM	ENSMUSG00000086154.3	ENSMUST00000233751.2	1708	1	1242	180	1242	-180	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	29250300	29250014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29250000_29250300
ES.14783.1	chr17	+	2141	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	-2	479	-2	-3	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGTTGTGTCTAGAA	NA	False	NA	12	True	AATAAA	-14	NA	29251599	29261868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.10	chr17	+	3355	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	-153	intron_retention	FALSE	canonical	3	62	junction_3	783.234958361793	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCTTAAGTTTCCTTA	NA	False	NA	22	True	ATTAAA	-17	NA	29251646	29261718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29259788_29260180
ES.14783.11	chr17	+	3456	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAAAGCCTGTTTTTC	NA	False	NA	33	True	ATTAAA	-24	NA	29251646	29261080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.12	chr17	+	1953	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	620	0	-144	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCCTTAAATGTGTTC	NA	False	NA	31	True	ATTAAA	-26	NA	29251646	29261727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.13	chr17	+	2402	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	171	0	-171	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTAGTGCCTTGTC	NA	False	NA	7	True	AATAAA	-20	NA	29251646	29262176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.14	chr17	+	4092	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	-155	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGGCTTAAGTTTCCT	NA	False	NA	20	True	ATTAAA	-15	NA	29251646	29261716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.16	chr17	+	2854	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	42	-302	1	-174	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGGCTTAGTGCCTT	NA	False	NA	4	True	AATAAA	-17	NA	29251647	29262173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.18	chr17	+	1761	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	42	791	1	-4	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAAAGCCTGTTTTTC	NA	False	NA	33	True	ATTAAA	-24	NA	29251647	29261080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.19	chr17	+	4244	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTTGTGTCTAGAAG	NA	False	NA	13	True	AATAAA	-15	NA	29251647	29261869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.2	chr17	+	1314	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	43	1261	-2	2	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTTTTTCCTTGCA	NA	False	NA	39	True	ATTAAA	-30	NA	29251644	29261086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.20	chr17	+	696	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	46	1876	1	-234	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTGGTGCATTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	29251647	29260471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.21	chr17	+	1830	5	NIC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	1	-5	intron_retention	FALSE	canonical	3	1420	junction_1	285.59630599852	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTAGTAGTCAGTC	NA	False	NA	10	True	AATAAA	-10	NA	29251647	29261212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29260268_29260357
ES.14783.23	chr17	+	3100	4	ISM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	42	800	1	-13	intron_retention	FALSE	canonical	3	62	junction_3	819.767446698554	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTTTAACTTGAAAGC	NA	False	NA	24	True	ATTAAA	-15	NA	29251647	29261071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427
ES.14783.25	chr17	+	1371	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	42	1181	1	-15	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAAGTGTGATGTACT	NA	False	NA	2	True	AATAAA	-16	NA	29251647	29260690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.26	chr17	+	2846	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	1	-234	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTGGTGCATTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	29251647	29260471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.27	chr17	+	4636	4	FSM	ENSMUSG00000071172.14	ENSMUST00000147265.9	4010	4	25	-651	1	-3	multi-exon	FALSE	canonical	3	1420	junction_1	325.271510519374	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGTTGTGTCTAGAA	NA	False	NA	12	True	AATAAA	-14	NA	29251647	29261868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29260268_29260357
ES.14783.28	chr17	+	3598	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	1	6	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCAGTCGAGCGAACCAC	NA	False	NA	21	True	AATAAA	-21	NA	29251647	29261223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.29	chr17	+	839	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	120	1659	59	-17	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTTAAGTGTGATGTA	NA	False	NA	0	True	AATAAA	-14	NA	29251721	29260688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.3	chr17	+	1465	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	43	1110	-2	20	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGTTGCCATTGTTC	NA	False	NA	35	True	AATAAA	-35	NA	29251644	29261237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.30	chr17	+	2501	6	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	62	-16	intron_retention	FALSE	canonical	3	61	junction_3	772.893938389997	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTGTTTAACTTGAA	NA	False	NA	21	True	ATTAAA	-12	NA	29251724	29261068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29251761_29255214_29255423_29257463_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.31	chr17	+	2762	7	NNC	ENSMUSG00000071172.14	novel	2110	3	NA	NA	1448	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1003.34318932036	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTGTTTAACTTGAA	NA	False	NA	21	True	ATTAAA	-12	NA	29253110	29261068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29254104_29255081_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.32	chr17	+	1975	5	ISM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	3612	485	-139	-9	3prime_fragment	FALSE	canonical	3	1763	junction_2	148.476429105767	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGAGAGTTGTGT	NA	False	NA	6	True	AATAAA	-8	NA	29255213	29261862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.33	chr17	+	4572	4	NIC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	-108	-7	intron_retention	FALSE	canonical	3	1932	junction_2	99.432836069826	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTTGGAGTATAT	NA	False	NA	11	True	ATTAAA	-13	NA	29255244	29262340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29255423_29257463_29259788_29260180_29260268_29260357
ES.14783.34	chr17	+	1619	4	ISM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	5860	634	-966	-158	3prime_fragment	FALSE	canonical	3	1763	junction_1	168.239908067814	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTGTGGCTTAAGTTT	NA	False	NA	17	True	ATTAAA	-12	NA	29257461	29261713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.35	chr17	+	1449	2	ISM	ENSMUSG00000071172.14	ENSMUST00000150157.3	2110	3	1687	-633	1511	-154	3prime_fragment	FALSE	canonical	3	2173	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTTAAGTTTCCTT	NA	False	NA	21	True	ATTAAA	-16	NA	29260178	29261717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29260268_29260357
ES.14783.5	chr17	+	3024	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	39	-469	-2	-7	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTTGGAGTATAT	NA	False	NA	11	True	ATTAAA	-13	NA	29251644	29262340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.6	chr17	+	1920	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	40	634	-1	20	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGTTGCCATTGTTC	NA	False	NA	35	True	AATAAA	-35	NA	29251645	29261237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14783.7	chr17	+	2567	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	44	7	-1	-7	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTTGGAGTATAT	NA	False	NA	11	True	ATTAAA	-13	NA	29251645	29262340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ES.14783.8	chr17	+	3927	3	ISM	ENSMUSG00000071172.14	ENSMUST00000147265.9	4010	4	24	149	0	-16	intron_retention	FALSE	canonical	3	1420	junction_1	301	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTGTTTAACTTGAA	NA	False	NA	21	True	ATTAAA	-12	NA	29251646	29261068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29251761_29255214_29255423_29257463
ES.14783.9	chr17	+	2544	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	41	9	0	-9	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGAGAGTTGTGT	NA	False	NA	6	True	AATAAA	-8	NA	29251646	29261862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ES.14784.1	chr17	-	2902	2	Antisense	novelGene_ENSMUSG00000071172.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGCCAGAAGAA	4284	False	NA	NA	False	NA	NA	NA	29259846	29254903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29255421_29257461
ES.14784.2	chr17	-	2664	1	Antisense	novelGene_ENSMUSG00000071172.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACCAACCAACCAAAAAA	4284	False	NA	NA	False	NA	NA	NA	29259846	29257182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29257200_29259800
ES.14784.3	chr17	-	223	1	Antisense	novelGene_ENSMUSG00000071172.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAGAAAAGA	4284	False	NA	NA	False	NA	NA	NA	29259846	29259623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29259600_29259800
ES.14785.1	chr17	-	211	1	Intergenic	novelGene_12376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTAAGACCACCATGGG	903	False	NA	NA	False	NA	NA	NA	29263227	29263016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29263000_29263200
ES.14786.1	chr17	-	206	1	Intergenic	novelGene_12377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAATAAAAGACTGG	NA	False	NA	NA	False	NA	NA	NA	29265859	29265653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29265700_29265900
ES.14787.1	chr17	+	154	1	Intergenic	novelGene_12378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTTTTGAGACAGG	2580	False	NA	4	True	NA	NA	NA	29271521	29271675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29271500_29271700
ES.14788.1	chr17	+	1203	3	NNC	ENSMUSG00000117007.2	novel	1162	3	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGACTGGTAAGC	4698	False	NA	NA	False	NA	NA	NA	29273639	29278726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29273838_29275316_29275414_29277818
ES.14788.2	chr17	+	1195	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233006.2	1125	3	-63	-7	-63	-3	multi-exon	FALSE	canonical	1	3	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGACTGGTAAGC	1546	False	NA	NA	False	NA	NA	NA	29275770	29278726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29275960_29276834_29276933_29277818
ES.14788.3	chr17	+	1433	3	NNC	ENSMUSG00000117007.2	novel	1247	3	NA	NA	304	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCAGACTGGTAAGC	1913	False	NA	NA	False	NA	NA	NA	29276137	29278726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29276565_29276834_29276933_29277818
ES.14789.1	chr17	+	2924	1	Intergenic	novelGene_12379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAAGGTCTTTTTTAA	8335	False	NA	NA	False	NA	NA	NA	29282559	29285483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29282600_29285500
ES.1479.1	chr1	-	206	1	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	136622262	136622056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136622100_136622300
ES.14790.1	chr17	+	242	1	Intergenic	novelGene_12380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCTTCCCCTTGCATC	NA	False	NA	NA	False	NA	NA	NA	29290385	29290627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29290400_29290600
ES.14791.1	chr17	-	5006	2	FSM	ENSMUSG00000085912.3	ENSMUST00000233478.2	1437	2	-27	-3542	21	1921	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	29291800	29274482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29279333_29291644
ES.14791.2	chr17	-	1255	1	ISM	ENSMUSG00000085912.3	ENSMUST00000133221.3	3218	2	18870	1625	12033	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGTAGCTCCATCATTG	NA	False	NA	NA	False	NA	NA	NA	29279283	29278028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29278000_29279300
ES.14792.1	chr17	-	175	1	Intergenic	novelGene_12381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATCTCTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	29296010	29295835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29295800_29296000
ES.14793.1	chr17	+	159	1	Intergenic	novelGene_12382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	29304727	29304886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29304700_29304900
ES.14794.1	chr17	+	177	1	Intergenic	novelGene_12383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATATTCAAGCATA	NA	False	NA	NA	False	NA	NA	NA	29307403	29307580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29307400_29307600
ES.14795.1	chr17	-	1392	1	Intergenic	novelGene_12384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	29309861	29308469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29308500_29309900
ES.14796.1	chr17	+	2004	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	-58	-1024	-55	-2	multi-exon	FALSE	canonical	3	83	junction_1	538	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTTGTCATTAGAGCA	1799	False	NA	27	True	NA	NA	NA	29309894	29319699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29310076_29317370_29317812_29318317
ES.14796.3	chr17	+	1913	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	3	-3	3	-2	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTTGTCATTAGAGCA	4650	False	NA	27	True	NA	NA	NA	29312745	29319699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29312836_29317370_29317812_29318317
ES.14796.4	chr17	+	722	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	4	1187	4	-42	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGTCTCCAAACTTAAA	4651	False	NA	38	True	TTTAAA	-30	NA	29312746	29318509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29312836_29317370_29317812_29318317
ES.14796.5	chr17	+	2414	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	5	0	5	0	intron_retention	FALSE	canonical	3	1306	junction_1	0	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4652	False	NA	24	True	NA	NA	NA	29312747	29319696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29312836_29317370
ES.14796.6	chr17	+	1860	3	NNC	ENSMUSG00000023067.15	novel	1913	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	546	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTCTTGTCATTAGAG	4652	False	NA	25	True	NA	NA	NA	29312747	29319697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29312836_29317419_29317812_29318317
ES.14796.7	chr17	+	5820	3	NNC	ENSMUSG00000023067.15	novel	1172	2	NA	NA	543	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	579	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATGTCTTGTCATTAG	5202	False	NA	23	True	NA	NA	NA	29313297	29319695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29316350_29316421_29317812_29318317
ES.14797.1	chr17	-	2055	1	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGCCCTGGACTT	NA	False	NA	NA	False	NA	NA	NA	29318923	29316868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29316900_29318900
ES.14797.2	chr17	-	1548	2	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGCCCTGGACTT	NA	False	NA	NA	False	NA	NA	NA	29318922	29316868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29317810_29318315
ES.14798.1	chr17	+	179	1	Intergenic	novelGene_12385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAGTACACCGT	5013	False	NA	NA	False	NA	NA	NA	29332118	29332297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29332100_29332300
ES.14799.1	chr17	+	3866	14	FSM	ENSMUSG00000064147.8	ENSMUST00000233717.2	3730	14	-137	1	-137	-1	multi-exon	TRUE	canonical	0	0	junction_7	2.02060392870211	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGTGTCAACTCTGAA	5876	False	NA	NA	False	AATAAA	-13	NA	29332981	29367953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29333210_29339815_29340035_29350437_29350547_29352611_29352787_29354159_29354307_29354788_29354880_29355240_29355337_29356952_29357147_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ES.14799.2	chr17	+	6288	10	NNC	ENSMUSG00000064147.8	novel	4105	8	NA	NA	6443	0	intron_retention	FALSE	canonical	0	0	junction_1	2.14878662286819	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTGTCAACTCTGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	29339597	29367954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29339689_29339815_29340035_29350437_29350547_29352611_29352787_29354159_29354307_29354788_29355337_29356952_29359525_29363462_29365017_29366321_29366399_29367158
ES.14799.3	chr17	+	3460	12	NNC	ENSMUSG00000064147.8	novel	3730	14	NA	NA	6668	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.29983829830428	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGTGTCAACTCTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	29339822	29367953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29340035_29350437_29350547_29352611_29352787_29354788_29354880_29356952_29357147_29357884_29357957_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ES.14799.4	chr17	+	2025	11	NIC	ENSMUSG00000064147.8	novel	3730	14	NA	NA	6729	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.23606797749979	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGTGTCAACTCTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	29339883	29367953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29340035_29350437_29350547_29352611_29352787_29354788_29354880_29356952_29357058_29359301_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ES.14799.5	chr17	+	3313	11	NIC	ENSMUSG00000064147.8	novel	3730	14	NA	NA	6743	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.1540659228538	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGTGTCAACTCTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	29339897	29367953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29340035_29350437_29350547_29352611_29352787_29354788_29354880_29356952_29357147_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ES.14799.6	chr17	+	1008	3	NNC	ENSMUSG00000064147.8	novel	1197	3	NA	NA	66	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGTGCCTGCCTT	3783	False	NA	NA	False	NA	NA	NA	29364758	29367995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29364828_29364914_29365017_29367158
ES.148.1	chr1	+	3185	2	Antisense	novelGene_ENSMUSG00000025939.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGACAGGGCCTCATAT	NA	False	NA	NA	False	NA	NA	NA	16675675	16685756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_16676851_16683746
ES.148.2	chr1	+	2723	1	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16683006	16685729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16683000_16685700
ES.148.3	chr1	+	254	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGGTGTGATGGTTT	NA	False	NA	NA	False	AATAGA	-39	NA	16683727	16683981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16683700_16684000
ES.1480.1	chr1	+	2675	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTATGTGAGTTTT	7571	False	NA	NA	False	ATTAAA	-14	NA	136635381	136638056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136635400_136638100
ES.14800.1	chr17	-	212	1	Intergenic	novelGene_12386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACTCTCAACCCT	3764	False	NA	NA	False	NA	NA	NA	29344157	29343945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29343900_29344200
ES.14801.1	chr17	-	429	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-61	-35	-61	35	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAATAAAAAA	NA	False	NA	NA	False	TTTAAA	-35	NA	29356339	29355910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29355900_29356300
ES.14802.1	chr17	-	171	1	Intergenic	novelGene_12387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAAAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	29356526	29356355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29356400_29356500
ES.14803.1	chr17	+	824	1	Antisense	novelGene_ENSMUSG00000024008.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGTCTCTAAGTCGA	1753	False	NA	NA	False	NA	NA	NA	29383505	29384329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_29383500_29384300
ES.14804.1	chr17	+	184	1	Intergenic	novelGene_12391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGACAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	29411787	29411971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29411800_29412000
ES.14805.1	chr17	+	181	1	Intergenic	novelGene_12392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGGATAA	NA	False	NA	NA	False	NA	NA	NA	29413746	29413927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29413700_29413900
ES.14806.1	chr17	+	183	1	Intergenic	novelGene_12393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAATATAGGA	NA	False	NA	NA	False	NA	NA	NA	29415482	29415665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29415500_29415700
ES.14807.1	chr17	+	156	2	Antisense	novelGene_ENSMUSG00000024008.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	29426179	29436485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_29426321_29436470
ES.14808.1	chr17	-	2475	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-5034	7	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCTCTCCTTTGAAA	3090	False	NA	-2	True	AGTAAA	-21	NA	29408111	29376882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
ES.14808.11	chr17	-	2396	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1396	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	27.4969695299925	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	6728	False	NA	-8	True	AGTAAA	-15	NA	29404473	29376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
ES.14808.13	chr17	-	2970	20	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	22465	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	45.8256360530608	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	9632	False	NA	-8	True	AGTAAA	-15	NA	29434221	29376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29434008
ES.14808.14	chr17	-	2369	13	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1990	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.5573829844404	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	6134	False	NA	-8	True	AGTAAA	-15	NA	29405067	29376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404955
ES.14808.16	chr17	-	2489	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1450	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.486723488054	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	6674	False	NA	-8	True	AGTAAA	-15	NA	29404527	29376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29403500_29403540_29404334
ES.14808.18	chr17	-	2492	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-4536	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.5532824878052	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	3588	False	NA	-9	True	AGTAAA	-14	NA	29407613	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29407481
ES.14808.19	chr17	-	1423	2	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-271	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	NA	False	NA	-9	True	AGTAAA	-14	NA	29378750	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378652
ES.14808.2	chr17	-	2072	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7989	7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	34	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCTCTCCTTTGAAA	9056	False	NA	-2	True	AGTAAA	-21	NA	29386468	29376882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29386382
ES.14808.20	chr17	-	2472	15	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-18652	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.4252135065609	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	8818	False	NA	-9	True	AGTAAA	-14	NA	29421729	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421681
ES.14808.21	chr17	-	2247	9	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-7951	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	44.5133406969192	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	9094	False	NA	-9	True	AGTAAA	-14	NA	29386430	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385471_29385754_29386382
ES.14808.22	chr17	-	2396	13	NNC	ENSMUSG00000024008.17	novel	2332	12	NA	NA	-1204	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	29.0402020194993	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	6920	False	NA	-9	True	AGTAAA	-14	NA	29404281	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404141
ES.14808.23	chr17	-	2810	18	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	25851	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	45.0064970319453	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	6485	False	NA	-9	True	AGTAAA	-14	NA	29430835	29376889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421474_29421543_29421828_29421880_29428397_29428475_29428663_29428704_29430621
ES.14808.24	chr17	-	335	1	Intergenic	novelGene_12388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTAATTTAATAGCC	6115	False	NA	NA	False	NA	NA	NA	29392015	29391680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29391700_29392000
ES.14808.25	chr17	-	156	1	Intergenic	novelGene_12389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAGAGAAAGCAGGAAC	6115	False	NA	NA	False	NA	NA	NA	29392015	29391859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29391900_29392000
ES.14808.26	chr17	-	1863	2	Intergenic	novelGene_12390	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29413577	29410766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29411565_29412512
ES.14808.27	chr17	-	2709	7	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	25894	18213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.14996653266291	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTTGCAACTCAGGC	6528	False	NA	NA	False	ATTAAA	-14	NA	29430792	29418622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29420869_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621
ES.14808.28	chr17	-	1431	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	7	24	7	1	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTCTAGTATTGTTC	9696	False	NA	-23	True	AATAAA	-24	NA	29483153	29469800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ES.14808.29	chr17	-	1184	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.38539643104	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9928	False	NA	-24	True	AATAAA	-23	NA	29482921	29469801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29470691_29471228_29471293_29480710_29480866_29482845
ES.14808.3	chr17	-	3513	22	NIC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-109	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	46.8986943138577	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCCCCTCTCCTTTGA	8238	False	NA	-4	True	AGTAAA	-19	NA	29457250	29376884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29456586
ES.14808.30	chr17	-	1131	3	NIC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	761.5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	9926	False	NA	-24	True	AATAAA	-23	NA	29482923	29469801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29470700_29480710_29480866_29482845
ES.14808.31	chr17	-	3442	2	ISM	ENSMUSG00000024007.16	ENSMUST00000234880.2	1117	3	-2090	0	-2090	0	intron_retention	FALSE	canonical	3	1356	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	NA	False	NA	-24	True	AATAAA	-23	NA	29473767	29469801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29470700_29471223
ES.14808.32	chr17	-	1139	5	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	664.727152672433	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTGGTCTAGTATTG	9931	False	NA	-26	True	AATAAA	-21	NA	29482918	29469803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29470700_29471223_29471293_29480710_29480766_29480819_29480866_29482845
ES.14808.34	chr17	-	1288	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	714.950969569864	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTGTTGTGGTCTAG	9697	False	NA	-31	True	AATAAA	-16	NA	29483152	29469808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29470700_29471223_29471293_29480710_29480866_29482979
ES.14808.35	chr17	-	956	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	228	278	-10	144	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGAAGGAGCCTTGGC	9917	False	NA	NA	False	AATGAA	-12	NA	29482932	29470054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ES.14808.4	chr17	-	1241	12	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-1393	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.9668220816183	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCCCCTCTCCTTTGA	6731	False	NA	-4	True	AGTAAA	-19	NA	29404470	29376884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29377133_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29404334
ES.14808.5	chr17	-	3039	22	Fusion	ENSMUSG00000024007.16_ENSMUSG00000024008.17	novel	5708	21	NA	NA	-10	4	multi-exon	FALSE	canonical	0	0	junction_20	314.179556385825	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCCCCCCTCTCCTTTG	9917	False	NA	-5	True	AGTAAA	-18	NA	29482932	29376885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29480710_29480866_29482845
ES.14808.6	chr17	-	2490	15	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-18637	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.4252135065609	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGACCCCCCCTCTCCTTT	8833	False	NA	-6	True	AGTAAA	-17	NA	29421714	29376886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421651
ES.14808.9	chr17	-	2924	22	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	47.3108119267686	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGACCCCCCCTCTCCT	8810	False	NA	-8	True	AGTAAA	-15	NA	29456678	29376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29451708_29451747_29456586
ES.14809.1	chr17	+	1428	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	19	1365	-18	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	330	False	NA	15	True	AATAAA	-16	NA	29487780	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.10	chr17	+	3307	3	FSM	ENSMUSG00000052712.18	ENSMUST00000156215.9	3230	3	-21	-56	0	56	multi-exon	FALSE	canonical	3	208	junction_1	59	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGCCTTTTTGCTCGAG	476	False	NA	NA	False	NA	NA	NA	29487926	29504199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29496830_29496922_29501033
ES.14809.11	chr17	+	759	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	10	4	2	0	multi-exon	FALSE	canonical	3	14	junction_1	140.841187157735	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	486	False	NA	15	True	AATAAA	-16	NA	29487936	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.13	chr17	+	1292	10	NNC	ENSMUSG00000052712.18	novel	2812	9	NA	NA	3	11551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	112.982900487061	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAACCGAATAACCAA	500	False	NA	NA	False	NA	NA	NA	29487950	29544590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329_29520496_29544552
ES.14809.14	chr17	+	177	1	Intergenic	novelGene_12394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAAGAGTG	4030	False	NA	NA	False	NA	NA	NA	29499676	29499853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29499700_29499900
ES.14809.15	chr17	+	1932	7	FSM	ENSMUSG00000024011.18	ENSMUST00000114701.10	3994	7	366	1696	-2	-1	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTCAGTGCTTTGC	NA	False	NA	NA	False	AATAAA	-12	NA	29538163	29547871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29538366_29541159_29541382_29544846_29544957_29545247_29545337_29545821_29546608_29546811_29546945_29547481
ES.14809.2	chr17	+	3892	7	NIC	ENSMUSG00000052712.18	novel	1270	9	NA	NA	-19	0	intron_retention	FALSE	canonical	3	208	junction_1	61.6299440207437	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGGTTGGTTGCTTA	420	False	NA	14	True	AATAAA	-15	NA	29487870	29520498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29487977_29496830_29496922_29501033_29501866_29512980_29513136_29513248_29515664_29517615_29517740_29520329
ES.14809.3	chr17	+	2679	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	126	7	-2	-7	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTCCTCTACCTTC	437	False	NA	11	True	NA	NA	NA	29487887	29521857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.4	chr17	+	1631	9	NNC	ENSMUSG00000052712.18	novel	1694	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	111.000492679087	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	454	False	NA	15	True	AATAAA	-16	NA	29487904	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29488304_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.5	chr17	+	1196	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	123	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	15	True	AATAAA	-16	NA	29487921	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.6	chr17	+	2425	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	7	-1359	-1	-9	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCAGCTTCCTCTACCT	475	False	NA	9	True	NA	NA	NA	29487925	29521855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.7	chr17	+	1037	8	NNC	ENSMUSG00000052712.18	novel	13859	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.71725499571	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	476	False	NA	15	True	AATAAA	-16	NA	29487926	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29487981_29501191_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.8	chr17	+	860	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	476	False	NA	15	True	AATAAA	-16	NA	29487926	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.14809.9	chr17	+	1068	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	8	-3	0	0	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	476	False	NA	15	True	AATAAA	-16	NA	29487926	29520499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ES.1481.1	chr1	+	870	1	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	136650608	136651478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136650600_136651500
ES.14810.1	chr17	-	4717	1	Antisense	novelGene_ENSMUSG00000052712.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAAAACAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	29500168	29495451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29495500_29500200
ES.14811.1	chr17	-	1806	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	97	-6	-67	2	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCTCTTATTTATGT	NA	False	NA	-3	True	AATAAA	-27	NA	29566811	29551043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.10	chr17	-	1347	13	FSM	ENSMUSG00000024012.19	ENSMUST00000235021.2	1108	13	-240	1	14	-1	multi-exon	FALSE	canonical	3	29	junction_1	349.661850538806	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566730	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551213_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.11	chr17	-	1948	11	NIC	ENSMUSG00000024012.19	novel	1652	13	NA	NA	12	-1	intron_retention	FALSE	canonical	2	5	junction_3	515.083449549682	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566732	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551753_29552487_29552817_29552931_29552980_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29560038_29560176_29561796_29561882_29566440
ES.14811.13	chr17	-	1675	12	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	-66	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	368.706696574898	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566810	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561893_29566625
ES.14811.14	chr17	-	1408	13	FSM	ENSMUSG00000024012.19	ENSMUST00000234129.2	1185	13	-224	1	-6	-1	multi-exon	FALSE	canonical	3	35	junction_1	348.277298124481	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566750	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551254_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.15	chr17	-	1623	11	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_4	353.152502468834	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566734	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.16	chr17	-	1324	13	NIC	ENSMUSG00000024012.19	novel	1093	13	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	338.237948376911	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566739	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551232_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.17	chr17	-	1623	11	NNC	ENSMUSG00000024012.19	novel	1897	12	NA	NA	25	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	452.853353747104	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566719	29551051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559475_29559764_29559872_29566440
ES.14811.18	chr17	-	1332	13	FSM	ENSMUSG00000024012.19	ENSMUST00000153658.3	1093	13	-241	2	-23	-2	multi-exon	FALSE	canonical	3	29	junction_1	333.56966622015	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566767	29551051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551213_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.2	chr17	-	1802	10	NIC	ENSMUSG00000024012.19	novel	2082	11	NA	NA	23	1	intron_retention	FALSE	canonical	2	5	junction_3	368.543915000574	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCAAGCCTCTTATT	NA	False	NA	-8	True	AATAAA	-22	NA	29566721	29551048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551753_29552487_29552817_29552931_29552980_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.20	chr17	-	1736	12	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	23	-2	intron_retention	FALSE	canonical	0	0	junction_1	367.478475222789	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566721	29551051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551730_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.21	chr17	-	3817	10	NIC	ENSMUSG00000024012.19	novel	2082	11	NA	NA	24	-2	intron_retention	FALSE	canonical	3	643	junction_3	163.840105733955	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGTGCAAGCCTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	29566720	29551051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551753_29552487_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29561882_29566440
ES.14811.24	chr17	-	1777	12	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	-7	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	458.564252372248	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCTGTGCAAGCCTC	NA	False	NA	-13	True	AATAAA	-17	NA	29566751	29551053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552560_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558770_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.25	chr17	-	1351	13	NIC	ENSMUSG00000024012.19	novel	1185	13	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	354.06178839293	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACTTCTGTGCAAGC	NA	False	NA	-16	True	AATAAA	-14	NA	29566721	29551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551232_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.26	chr17	-	1888	11	FSM	ENSMUSG00000024012.19	ENSMUST00000234948.2	2082	11	187	7	23	1	multi-exon	FALSE	canonical	3	643	junction_3	167.440616339047	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACTTCTGTGCAAGC	NA	False	NA	-16	True	AATAAA	-14	NA	29566721	29551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551753_29552487_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.28	chr17	-	1159	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	169	624	5	-612	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCAAACATTTATGGGGT	NA	False	NA	NA	False	NA	NA	NA	29566739	29551669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.3	chr17	-	1863	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	85	4	-79	0	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566823	29551049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.4	chr17	-	1837	11	NIC	ENSMUSG00000024012.19	novel	1897	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	643	junction_3	162.533227372128	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566734	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29551753_29552487_29552564_29552748_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.5	chr17	-	1923	12	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	-45	-1	intron_retention	FALSE	canonical	1	1	junction_2	368.508407340988	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566789	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552653_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ES.14811.6	chr17	-	1431	14	NNC	ENSMUSG00000024012.19	novel	1652	13	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	503.749397638649	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566730	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551213_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29560038_29560176_29561796_29561880_29566440
ES.14811.7	chr17	-	1920	13	FSM	ENSMUSG00000024012.19	ENSMUST00000234416.2	1652	13	-269	1	-51	-1	multi-exon	FALSE	canonical	3	18	junction_11	417.184478245403	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566795	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29560038_29560176_29561796_29561882_29566440
ES.14811.8	chr17	-	1687	11	NNC	ENSMUSG00000024012.19	novel	1952	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_10	373.675112898892	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29566750	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559855_29566440
ES.14811.9	chr17	-	7501	8	NNC	ENSMUSG00000024012.19	novel	1897	12	NA	NA	-1069	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	403.175406198425	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	False	NA	-10	True	AATAAA	-20	NA	29560579	29551050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29553511_29553691_29558817_29559041_29559100_29559394_29559473_29559764
ES.14812.1	chr17	+	182	1	Intergenic	novelGene_12395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29572940	29573122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29572900_29573100
ES.14812.2	chr17	+	176	2	Intergenic	novelGene_12396	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACGAGTGTTA	NA	False	NA	11	True	NA	NA	NA	29572943	29577384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29573039_29577303
ES.14812.3	chr17	+	277	1	Intergenic	novelGene_12397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTGGTTTT	NA	False	NA	108	True	NA	NA	NA	29577204	29577481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29577200_29577500
ES.14813.1	chr17	+	2382	16	FSM	ENSMUSG00000024013.16	ENSMUST00000024810.8	2640	16	0	258	0	1	multi-exon	TRUE	canonical	0	0	junction_1	0.894427190999916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGTTGTAGCTTAA	NA	False	NA	NA	False	NA	NA	NA	29579887	29598269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29580132_29582684_29582917_29583884_29583966_29584435_29584585_29585944_29586102_29586244_29586384_29586894_29586954_29587157_29587305_29588218_29588312_29592191_29592272_29592357_29592389_29592984_29593078_29593820_29593953_29595801_29595949_29597286_29597434_29597818
ES.14813.2	chr17	+	2416	17	NNC	ENSMUSG00000024013.16	novel	2640	16	NA	NA	1	44266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.899218410621135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAACAAACAAAAACAATT	NA	False	NA	NA	False	NA	NA	NA	29579888	29642901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29580132_29582684_29582917_29583884_29583966_29584435_29584585_29585944_29586102_29586244_29586384_29586894_29586954_29587157_29587305_29588218_29588312_29592191_29592272_29592357_29592389_29592984_29593078_29593820_29593953_29595801_29595949_29597286_29597434_29597818_29598265_29642861
ES.14813.3	chr17	+	2335	16	NNC	ENSMUSG00000024013.16	novel	2640	16	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.894427190999916	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGTTGTAGCTTAA	NA	False	NA	NA	False	NA	NA	NA	29579902	29598269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29580132_29582684_29582917_29583884_29583966_29584435_29584585_29585944_29586102_29586244_29586384_29586894_29586954_29587157_29587305_29588218_29588312_29592191_29592272_29592357_29592389_29592984_29593078_29593820_29593953_29595801_29595917_29597286_29597434_29597818
ES.14813.4	chr17	+	158	1	Intergenic	novelGene_12398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAACCTAAAA	NA	False	NA	NA	False	NA	NA	NA	29585361	29585519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29585400_29585500
ES.14813.5	chr17	+	174	1	Intergenic	novelGene_12399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATGTGTTGATCA	NA	False	NA	NA	False	NA	NA	NA	29601974	29602148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29602000_29602100
ES.14814.1	chr17	-	226	1	Intergenic	novelGene_12400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATTGTCTCACTGCA	NA	False	NA	NA	False	NA	NA	NA	29606160	29605934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29605900_29606200
ES.14815.1	chr17	-	147	1	Intergenic	novelGene_12401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29641116	29640969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29641000_29641100
ES.14816.1	chr17	-	922	1	Genic_Genomic	ENSMUSG00000097125.3	novel	NA	NA	NA	NA	16578	263	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	29666551	29665629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_29665600_29666600
ES.14816.2	chr17	-	509	2	NNC	ENSMUSG00000097125.3	novel	417	2	NA	NA	15939	78	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGTTATTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	29667190	29665814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29666108_29666974
ES.14816.3	chr17	-	159	1	ISM	ENSMUSG00000097125.3	ENSMUST00000234190.2	417	2	17642	31	17047	3	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	29666082	29665923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29665900_29666100
ES.14817.1	chr17	-	296	1	Intergenic	novelGene_12402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCATAAAAACCAAAA	5683	False	NA	NA	False	NA	NA	NA	29685566	29685270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29685300_29685600
ES.14818.1	chr17	+	3419	2	Antisense	novelGene_ENSMUSG00000097125.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCTTGAAAAA	723	False	NA	NA	False	NA	NA	NA	29691991	29704067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_29695022_29703678
ES.14819.1	chr17	+	219	1	Intergenic	novelGene_12404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGCAGAAAAAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	29707060	29707279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29707100_29707300
ES.1482.1	chr1	+	7850	1	Genic_Genomic	ENSMUSG00000097448.2	novel	NA	NA	NA	NA	27682	5600	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAACCCACTGAAGGCT	NA	False	NA	NA	False	NA	NA	NA	136651630	136659480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_136651600_136659500
ES.14820.1	chr17	+	3790	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	-1091	-1	-1091	1	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTTTCCATTCATTC	NA	False	NA	18	True	AATAAA	-19	NA	29708635	29715087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.10	chr17	+	2623	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	64	junction_2	774.062780076655	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709746	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29710406_29710638_29711006_29712695_29712873_29713563
ES.14820.11	chr17	+	3366	5	ISM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	22	1	22	-1	intron_retention	FALSE	canonical	3	1677	junction_4	126.197018586019	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	16	True	AATAAA	-17	NA	29709748	29715085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695
ES.14820.12	chr17	+	2771	5	FSM	ENSMUSG00000024014.9	ENSMUST00000234294.2	1578	5	-530	-663	22	0	multi-exon	FALSE	canonical	3	1677	junction_3	119.340636415263	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709748	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.13	chr17	+	2752	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	30	0	intron_retention	FALSE	canonical	3	1677	junction_3	126.19429464124	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709756	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.14	chr17	+	2853	4	NIC	ENSMUSG00000024014.9	novel	1578	5	NA	NA	31	-1	intron_retention	FALSE	canonical	3	1677	junction_2	137.349513609947	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	16	True	AATAAA	-17	NA	29709757	29715085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.15	chr17	+	2550	7	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	708.023461632609	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709759	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29709848_29709958_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.16	chr17	+	3636	2	NIC	ENSMUSG00000024014.9	novel	1578	5	NA	NA	33	-1	intron_retention	FALSE	canonical	3	1677	junction_1	0	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	False	NA	16	True	AATAAA	-17	NA	29709759	29715085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29711006_29712695
ES.14820.17	chr17	+	2122	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	33	30	intron_retention	FALSE	canonical	3	1677	junction_3	102.616701856959	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGACAAGCTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	29709759	29714449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29710406_29710493_29711006_29712695_29712873_29713563
ES.14820.19	chr17	+	5319	1	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	37	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1863	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709763	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29709800_29715100
ES.14820.2	chr17	+	2573	7	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	708.023461632609	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709624	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563_29714365_29714587
ES.14820.20	chr17	+	2641	6	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.113023421347	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709763	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710184_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.21	chr17	+	2649	6	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	760.325035757734	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709763	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713571
ES.14820.23	chr17	+	3524	3	NIC	ENSMUSG00000024014.9	novel	586	4	NA	NA	43	0	intron_retention	FALSE	canonical	3	1677	junction_2	138	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709769	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29711006_29712695
ES.14820.24	chr17	+	2827	4	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	49	0	intron_retention	FALSE	canonical	3	1677	junction_2	116.645712403938	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709775	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29711006_29712695_29712873_29713563
ES.14820.25	chr17	+	2924	3	NIC	ENSMUSG00000024014.9	novel	1578	5	NA	NA	50	-1	intron_retention	FALSE	canonical	3	1677	junction_1	101	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGAGTTTTCCAT	NA	False	NA	12	True	AATAAA	-13	NA	29709776	29715081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29711006_29712695_29712873_29713563
ES.14820.26	chr17	+	1910	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	51	737	51	-67	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTCCTCTTTGGTTTC	NA	False	NA	NA	False	AGTAAA	-15	NA	29709777	29714349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.27	chr17	+	2415	6	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	760.325035757734	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709777	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712756_29713674
ES.14820.28	chr17	+	2545	6	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.113023421347	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGAGTTTTCCAT	NA	False	NA	12	True	AATAAA	-13	NA	29709782	29715081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710163_29710353_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.29	chr17	+	2426	7	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	708.023461632609	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709829	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29710684_29710848_29711006_29712695_29712873_29713563
ES.14820.30	chr17	+	1759	3	NNC	ENSMUSG00000024014.9	novel	867	2	NA	NA	-211	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	939.5	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACCTTTGAGTTTTCCA	NA	False	NA	11	True	AATAAA	-12	NA	29711799	29715080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29711865_29712695_29712873_29713563
ES.14820.31	chr17	+	2584	2	FSM	ENSMUSG00000024014.9	ENSMUST00000234270.2	867	2	-575	-1142	-205	-2	multi-exon	FALSE	canonical	3	1879	junction_1	0	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACCTTTGAGTTTTCCA	NA	False	NA	11	True	AATAAA	-12	NA	29711805	29715080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29712873_29713563
ES.14820.32	chr17	+	1789	3	NNC	ENSMUSG00000024014.9	novel	1794	3	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	939.5	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29712059	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29712153_29712695_29712873_29713563
ES.14820.33	chr17	+	1807	3	NNC	ENSMUSG00000024014.9	novel	867	2	NA	NA	138	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	939.5	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29712148	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29712260_29712695_29712873_29713563
ES.14820.4	chr17	+	2062	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	0	636	0	31	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACAAGCTGTAAATGTG	NA	False	NA	NA	False	NA	NA	NA	29709726	29714450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ES.14820.5	chr17	+	2787	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	1677	junction_3	102.616701856959	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709727	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29710200_29710298_29710406_29710493_29711006_29712695_29712873_29713563
ES.14820.6	chr17	+	2686	6	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_5	755.974073629513	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709732	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713565
ES.14820.9	chr17	+	1946	4	NNC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	842.204382689987	1863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	False	NA	13	True	AATAAA	-14	NA	29709739	29715082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29709919_29710934_29711006_29712695_29712873_29713563
ES.14821.1	chr17	-	4102	2	Intergenic	novelGene_12403	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGGTGTGGAGCAGGAG	7773	False	NA	NA	False	NA	NA	NA	29709225	29704891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29707047_29707278
ES.14822.1	chr17	-	1938	1	Antisense	novelGene_ENSMUSG00000024014.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3086	False	NA	NA	False	NA	NA	NA	29713912	29711974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29712000_29713900
ES.14823.1	chr17	+	181	1	Intergenic	novelGene_12405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	496	False	NA	NA	False	NA	NA	NA	29717627	29717808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29717600_29717800
ES.14824.1	chr17	-	165	1	Intergenic	novelGene_12406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	29720500	29720335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29720300_29720500
ES.14825.1	chr17	+	170	1	Intergenic	novelGene_12407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGATTTATTTAT	6866	False	NA	NA	False	NA	NA	NA	29723997	29724167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29724000_29724200
ES.14826.1	chr17	+	171	1	Intergenic	novelGene_12408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	29732498	29732669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29732500_29732700
ES.14827.1	chr17	-	2209	2	NNC	ENSMUSG00000091614.3	novel	1511	5	NA	NA	-53	3574	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTGTCTGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	29738817	29734041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29735143_29737709
ES.14827.2	chr17	-	1329	1	FSM	ENSMUSG00000091614.3	ENSMUST00000168877.2	510	1	-81	-738	-81	99	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGTTCAGTGGTAGA	NA	False	NA	NA	False	ATTAAA	-15	NA	29738845	29737516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29737500_29738800
ES.14827.3	chr17	-	156	1	ISM	ENSMUSG00000091614.3	ENSMUST00000234305.2	1511	5	30825	16	977	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAATATATAT	NA	False	NA	NA	False	NA	NA	NA	29737787	29737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_29737600_29737800
ES.14828.1	chr17	-	168	1	Intergenic	novelGene_12409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	29744297	29744129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29744100_29744300
ES.14829.1	chr17	+	3337	19	Fusion	ENSMUSG00000042203.9_ENSMUSG00000090083.12	novel	3595	13	NA	NA	-12	9	intron_retention	TRUE	canonical	1	2	junction_12	79.7893058832657	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCTTCGGTGTGTTT	NA	False	NA	25	True	AATAAA	-24	NA	29768746	29860632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.100	chr17	+	7286	20	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	40	2	intron_retention	FALSE	canonical	3	368	junction_15	34.4763759495536	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879634	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29916190_29916922_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.101	chr17	+	2972	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	42	413	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_11	91.8710981579549	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGTTGTTTCTTGTG	NA	False	NA	16	True	NA	NA	NA	29879636	29921659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909327_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.102	chr17	+	4870	22	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	42	0	intron_retention	FALSE	canonical	3	368	junction_15	33.3930078088444	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879636	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29920058_29920458_29920568_29921127
ES.14829.103	chr17	+	4198	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	44	0	intron_retention	FALSE	canonical	3	48	junction_8	89.644626670588	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879638	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.104	chr17	+	5269	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	45	0	intron_retention	FALSE	canonical	3	368	junction_15	33.5684375567288	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879639	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29920568_29921127
ES.14829.105	chr17	+	3968	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	123.868702974398	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879639	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918041_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.106	chr17	+	3746	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	96.7453930557147	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGTGGCTCTGTGCTG	NA	False	NA	13	True	ATTAAA	-13	NA	29879639	29922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919884_29920058_29920458_29920568_29921127
ES.14829.107	chr17	+	4270	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	45	0	intron_retention	FALSE	canonical	2	4	junction_1	102.188355501006	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879639	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920568_29921127
ES.14829.108	chr17	+	3689	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	96.6492107742698	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879646	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918186_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.109	chr17	+	3952	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_1	96.8018458165812	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879676	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29880047_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.11	chr17	+	3283	12	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.0256116352625	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768761	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29768969_29783405_29783463_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.110	chr17	+	3916	24	NIC	ENSMUSG00000024019.19	novel	2815	26	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	96.8018458165812	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879799	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29880133_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.111	chr17	+	6383	24	NNC	ENSMUSG00000024019.19	novel	2815	26	NA	NA	78	-8	intron_retention	FALSE	canonical	0	0	junction_1	96.8018458165812	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCACTTCTGTTTCTC	NA	False	NA	20	True	AATAAA	-22	NA	29879858	29924945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29880047_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.112	chr17	+	3494	22	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-2030	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	101.25339220543	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	6240	False	NA	17	True	ATTAAA	-17	NA	29893172	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906234_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.113	chr17	+	3632	20	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	48	junction_5	96.1070501937964	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	8267	False	NA	15	True	ATTAAA	-15	NA	29895199	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.114	chr17	+	4868	12	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	30649	9	-3166	-9	3prime_fragment	FALSE	canonical	3	368	junction_3	30.6661576194426	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACCACTTCTGTTTCT	NA	False	NA	19	True	AATAAA	-21	NA	29910217	29924944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.115	chr17	+	2832	12	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	30788	1906	-3027	714	3prime_fragment	FALSE	canonical	3	368	junction_3	30.6661576194426	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCATGCTGCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	29910356	29923047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.116	chr17	+	3217	4	ISM	ENSMUSG00000024019.19	ENSMUST00000138939.2	3075	14	11051	1	-553	0	intron_retention	FALSE	canonical	3	437	junction_1	16.0069429380573	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29917080	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29918263_29919207_29919256_29919944_29920058_29920458
ES.14829.117	chr17	+	4198	3	FSM	ENSMUSG00000024019.19	ENSMUST00000234716.2	3600	3	2011	-2609	1128	-12	multi-exon	FALSE	canonical	3	460	junction_2	8	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAACCACTTCTGTT	NA	False	NA	16	True	AATAAA	-18	NA	29919782	29924941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29920058_29920458_29920568_29921127
ES.14829.12	chr17	+	2096	10	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-1	-22088	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.87099251052	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATGTATTTATGTATA	NA	False	NA	NA	False	AATAAA	-24	NA	29768763	29803780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783097_29783225_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
ES.14829.13	chr17	+	2094	13	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-1	-1497	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.5104592340925	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCCCAAGGCATAGAA	NA	False	NA	NA	False	TTTAAA	-22	NA	29768763	29824371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794127_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.14	chr17	+	3366	11	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	41.8979713112699	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.15	chr17	+	1959	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-22097	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	44.8857925740428	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAACCCATATGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	29768764	29803771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
ES.14829.16	chr17	+	3641	14	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	49.6426281792612	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29800854_29800908_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.17	chr17	+	3640	13	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.9335385359224	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCGGGGCTTTGGTTTC	NA	False	NA	8	True	AATAAA	-14	NA	29768764	29825866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783405_29783463_29787311_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.18	chr17	+	5318	12	ISM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	6	2873	0	-2872	5prime_fragment	FALSE	canonical	3	108	junction_11	14.3365682812396	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGGCTTAACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	29768764	29822996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119
ES.14829.19	chr17	+	3647	13	FSM	ENSMUSG00000042203.9	ENSMUST00000234778.2	3651	13	0	4	0	0	multi-exon	FALSE	canonical	1	4	junction_5	38.5777533762084	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768764	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790769_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.2	chr17	+	3622	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	-12	-15	-12	12	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTGGTTTGGTTTG	NA	False	NA	26	True	AATAAA	-32	NA	29768746	29825884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.20	chr17	+	3501	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	6	88	0	-87	multi-exon	FALSE	canonical	3	108	junction_11	15.481844205391	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGGTTTTATTTTTTT	NA	False	NA	2	True	AGTAAA	-21	NA	29768764	29825781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.21	chr17	+	1990	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	2	-22094	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	57.8509669322821	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCATATGTATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	29768766	29803774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789533_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802939
ES.14829.23	chr17	+	2415	8	ISM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	22	26651	16	-26650	5prime_fragment	FALSE	canonical	3	120	junction_2	11.3694901434695	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAAACGTCTTTATTT	NA	False	NA	NA	False	AATATA	-12	NA	29768780	29799218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802
ES.14829.24	chr17	+	207	1	Intergenic	novelGene_12410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAACACAAA	2453	False	NA	NA	False	AATAAA	-10	NA	29771805	29772012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29771800_29772000
ES.14829.25	chr17	+	3110	18	Fusion	ENSMUSG00000042203.9_ENSMUSG00000090083.12	novel	3595	13	NA	NA	-7993	2	intron_retention	FALSE	canonical	1	2	junction_11	81.3871520088443	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	8816	False	NA	18	True	AATAAA	-17	NA	29783403	29860625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.26	chr17	+	191	1	Intergenic	novelGene_12413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGGGCATTAGA	NA	False	NA	NA	False	NA	NA	NA	29793045	29793236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29793000_29793200
ES.14829.27	chr17	+	6465	4	NIC	ENSMUSG00000042203.9	novel	3315	8	NA	NA	22162	0	intron_retention	FALSE	canonical	3	108	junction_2	12.9700509722291	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29813558	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29813758_29814821_29818941_29819119_29819216_29823817
ES.14829.28	chr17	+	4401	29	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	-83	-672	intron_retention	TRUE	canonical	1	2	junction_7	106.921885228499	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTGTTTCTTGTGGT	NA	False	NA	18	True	NA	NA	NA	29833766	29921661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.29	chr17	+	2073	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	7	3324	7	18	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTGTTTACTTTCCTT	NA	False	NA	34	True	AATAAA	-33	NA	29833770	29860641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.3	chr17	+	4837	12	NIC	ENSMUSG00000042203.9	novel	3651	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	108	junction_10	16.0082623294946	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29768749	29825868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.30	chr17	+	1935	9	FSM	ENSMUSG00000090083.12	ENSMUST00000234362.2	1780	9	-153	-2	-7	2	multi-exon	FALSE	canonical	2	15	junction_3	87.2496418330757	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833788	29860625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29834053_29840482_29840612_29845479_29845817_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.31	chr17	+	5096	30	NNC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	-60	1	intron_retention	FALSE	canonical	0	0	junction_9	144.161134908385	666	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	NA	False	NA	17	True	ATTAAA	-17	NA	29833789	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29896832_29896878_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.32	chr17	+	1900	7	NIC	ENSMUSG00000090083.12	novel	5404	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1	junction_4	104.767467384786	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	15	True	AATAAA	-14	NA	29833834	29860622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29853634_29853743_29854791_29854997_29860189
ES.14829.33	chr17	+	3474	6	NNC	ENSMUSG00000090083.12	novel	1780	9	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_3	110.157342015864	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29833837	29854249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29840482_29840612_29845479_29845829_29845920_29847997_29850644_29850735_29853634
ES.14829.34	chr17	+	5563	28	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	-6	1	intron_retention	FALSE	canonical	1	2	junction_7	108.312964213594	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	NA	False	NA	17	True	ATTAAA	-17	NA	29833843	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.35	chr17	+	4995	29	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	-4	1	intron_retention	FALSE	canonical	1	2	junction_7	106.921885228499	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	NA	False	NA	17	True	ATTAAA	-17	NA	29833845	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.36	chr17	+	4933	29	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2	junction_7	124.352383596465	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29833847	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.37	chr17	+	1892	9	NNC	ENSMUSG00000090083.12	novel	1780	9	NA	NA	-13	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.1831566773454	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCTTCGGTGTGTTT	NA	False	NA	25	True	AATAAA	-24	NA	29833850	29860632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29840482_29840612_29845479_29845829_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.38	chr17	+	2256	9	NNC	ENSMUSG00000090083.12	novel	1780	9	NA	NA	5	1	intron_retention	FALSE	canonical	1	1	junction_1	118.721312324283	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCAGCTGGGCTTCG	NA	False	NA	17	True	AATAAA	-16	NA	29833868	29860624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29838267_29838566_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.39	chr17	+	3558	8	NIC	ENSMUSG00000090083.12	novel	1780	9	NA	NA	12	2	intron_retention	FALSE	canonical	2	15	junction_3	91.9673855233473	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833875	29860625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29845817_29845920_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.40	chr17	+	1779	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	114	3511	14	-55	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTGTTGATTGTTTT	NA	False	NA	6	True	ATTAAA	-20	NA	29833877	29860454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.41	chr17	+	2155	7	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	114	8328	14	734	5prime_fragment	FALSE	canonical	3	261	junction_5	9.75961064797157	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTACGTTTGCTACTGT	NA	False	NA	NA	False	NA	NA	NA	29833877	29855637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791
ES.14829.42	chr17	+	1939	8	NNC	ENSMUSG00000090083.12	novel	5404	8	NA	NA	15	2	intron_retention	FALSE	canonical	1	5	junction_1	96.1378686882457	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCAGCTGGGCTTCGG	NA	False	NA	18	True	AATAAA	-17	NA	29833878	29860625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29840492_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.43	chr17	+	3546	8	NNC	ENSMUSG00000090083.12	novel	5404	8	NA	NA	15	1	intron_retention	FALSE	non_canonical	0	0	junction_2	123.109541399818	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCAGCTGGGCTTCG	NA	False	NA	17	True	AATAAA	-16	NA	29833878	29860624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29840482_29840612_29845489_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29858581
ES.14829.44	chr17	+	2133	10	NNC	ENSMUSG00000090083.12	novel	1780	9	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	127.609647841463	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	15	True	AATAAA	-14	NA	29833885	29860622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29834053_29838267_29838566_29840482_29840612_29845479_29845817_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.45	chr17	+	5081	30	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	44	0	intron_retention	FALSE	canonical	1	1	junction_7	105.429375180785	666	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29833893	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.47	chr17	+	5483	4	FSM	ENSMUSG00000090083.12	ENSMUST00000161242.8	862	4	-4506	-115	-1610	1	multi-exon	FALSE	canonical	3	261	junction_1	11.0453610171873	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCAGCTGGGCTTCG	3823	False	NA	17	True	AATAAA	-16	NA	29845999	29860624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29850735_29853634_29853743_29854791_29854997_29860189
ES.14829.48	chr17	+	3978	1	NIC	ENSMUSG00000090083.12	novel	5404	8	NA	NA	3193	7	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGGGCTTCGGTGTGT	8431	False	NA	23	True	AATAAA	-22	NA	29856652	29860630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29856700_29860600
ES.14829.49	chr17	+	989	1	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	27293	1920	7597	1422	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGTCTCTGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	29861056	29862045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29861100_29862000
ES.14829.5	chr17	+	3494	12	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-7	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	40.335575831838	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTCCTGGTGTGGT	NA	False	NA	18	True	AATAAA	-24	NA	29768751	29825876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.50	chr17	+	140	1	Intergenic	novelGene_12418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29875121	29875261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_29875100_29875300
ES.14829.51	chr17	+	3809	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	-29	2600	-29	20	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGTCCACAGTGCTG	NA	False	NA	36	True	ATTAAA	-36	NA	29879539	29922353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.52	chr17	+	3639	25	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	94.8704892061921	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879571	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127_29921487_29921603
ES.14829.54	chr17	+	3612	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	98.1865318733802	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879581	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.55	chr17	+	3080	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	13	3287	-6	420	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCTTGTGGTCTTTT	NA	False	NA	23	True	NA	NA	NA	29879581	29921666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.56	chr17	+	3779	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	96.7453930557147	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879582	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919911_29920058_29920458_29920568_29921127
ES.14829.57	chr17	+	3718	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	96.9040801831567	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879582	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914446_29916064_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.58	chr17	+	6363	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	15	2	-4	-2	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTGTTTCTCTCTGAT	NA	False	NA	26	True	AATAAA	-28	NA	29879583	29924951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.59	chr17	+	4672	22	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_16	100.56976008717	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879584	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916020_29916190_29916922_29917046_29917611_29918263_29919207_29919256_29919944_29920568_29921127
ES.14829.61	chr17	+	4221	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	5	2	intron_retention	FALSE	canonical	3	368	junction_15	32.648801124636	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879599	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.62	chr17	+	6199	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	8	2	intron_retention	FALSE	canonical	3	368	junction_14	35.8165813555677	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879602	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29916190_29916922_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.64	chr17	+	3700	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	123.905873171643	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGGCTCTGTGCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	29879605	29922331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916020_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.65	chr17	+	3666	24	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	87.7941612227232	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879606	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.66	chr17	+	2684	23	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	38	4218	12	-511	5prime_fragment	FALSE	canonical	3	368	junction_15	34.4016144153173	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCAGGGTCTCAGGTA	NA	False	NA	NA	False	NA	NA	NA	29879606	29920735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458
ES.14829.67	chr17	+	3710	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	96.1088505451974	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879606	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913806_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.68	chr17	+	3670	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	14	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	96.4567544656235	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTTACAGAATCTTGGA	NA	False	NA	-27	True	NA	NA	NA	29879608	29922290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918200_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.7	chr17	+	3552	12	NIC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-6	5	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	38.1705611111127	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCCTGGTGTGGTT	NA	False	NA	19	True	AATAAA	-25	NA	29768752	29825877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29768969_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ES.14829.70	chr17	+	5311	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	14	2	intron_retention	FALSE	canonical	3	368	junction_15	34.160686166101	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879608	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.71	chr17	+	4123	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	14	2	intron_retention	FALSE	canonical	3	368	junction_15	33.8884899643834	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTCTGTGCTGGGCTG	NA	False	NA	18	True	ATTAAA	-18	NA	29879608	29922335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920568_29921127
ES.14829.72	chr17	+	2997	23	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	42	3901	16	-194	5prime_fragment	FALSE	canonical	3	368	junction_15	34.4016144153173	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTAGTGGTTTCTTGG	NA	False	NA	NA	False	TATAAA	-16	NA	29879610	29921052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458
ES.14829.76	chr17	+	6185	23	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	22	-13	intron_retention	FALSE	non_canonical	0	0	junction_17	131.980683535305	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTAAAACCACTTCTGT	NA	False	NA	15	True	AATAAA	-17	NA	29879616	29924940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917047_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.77	chr17	+	3664	23	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.0838195962647	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879616	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29904798_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.78	chr17	+	3697	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	129.758260042085	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879618	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913230_29913279_29913758_29913817_29914399_29914469_29916061_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.79	chr17	+	5768	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	31	0	intron_retention	FALSE	canonical	3	48	junction_8	93.634074994096	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879625	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29920058_29920458_29920568_29921127
ES.14829.8	chr17	+	1914	8	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	-6	-22097	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	61.3011968455256	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAACCCATATGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	29768752	29803771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29768969_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
ES.14829.81	chr17	+	4733	22	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	91.071126672391	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879627	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29920568_29921127
ES.14829.82	chr17	+	3746	25	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	127.375586085229	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879627	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29896832_29896878_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.84	chr17	+	3685	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.8622860429534	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906114_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.85	chr17	+	3684	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	154.243541009954	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	NA	False	NA	17	True	ATTAAA	-17	NA	29879628	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899564_29899635_29900891_29900987_29901100_29901159_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.86	chr17	+	3284	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	413	intron_retention	FALSE	canonical	3	48	junction_8	89.6860110525181	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGTTGTTTCTTGTG	NA	False	NA	16	True	NA	NA	NA	29879628	29921659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.87	chr17	+	4645	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	intron_retention	FALSE	canonical	3	368	junction_15	34.514010809362	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.88	chr17	+	2933	23	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	413	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	99.013616644337	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGTTGTTTCTTGTG	NA	False	NA	16	True	NA	NA	NA	29879628	29921659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.89	chr17	+	5227	25	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	169.258016181411	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTCTGTGCTGGGCT	NA	False	NA	17	True	ATTAAA	-17	NA	29879628	29922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29914818_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29918987_29919256_29919328_29919396_29919944_29920058_29920458_29920568_29921127
ES.14829.91	chr17	+	6050	20	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	intron_retention	FALSE	canonical	3	368	junction_14	36.3648791024109	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879628	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29920568_29921127
ES.14829.92	chr17	+	4790	22	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	368	junction_15	34.6216348021274	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29920568_29921127
ES.14829.94	chr17	+	5013	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	intron_retention	FALSE	canonical	3	48	junction_8	93.6082795483391	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879628	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.95	chr17	+	6931	21	NIC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	-1	intron_retention	FALSE	canonical	3	48	junction_7	93.0945218581631	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGGCTCTGTGCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	29879628	29922331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29919256_29919944_29920568_29921127
ES.14829.96	chr17	+	3815	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	123.762028496395	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879628	29922333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29915884_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.98	chr17	+	3787	24	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	96.8847267816444	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879630	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919117_29919256_29919944_29920058_29920458_29920568_29921127
ES.14829.99	chr17	+	3776	25	NNC	ENSMUSG00000024019.19	novel	6380	24	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.31399831388	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGGCTCTGTGCTGGG	NA	False	NA	15	True	ATTAAA	-15	NA	29879633	29922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_29879746_29880050_29880133_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ES.1483.1	chr1	-	178	1	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGACCCAGAAATG	NA	False	NA	NA	False	NA	NA	NA	136655292	136655114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136655100_136655300
ES.14830.1	chr17	-	176	1	Intergenic	novelGene_12411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAACC	NA	False	NA	NA	False	NA	NA	NA	29780235	29780059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29780100_29780200
ES.14830.2	chr17	-	173	2	Antisense	novelGene_ENSMUSG00000098764.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	29827636	29780060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29780205_29827607
ES.14830.3	chr17	-	158	1	Intergenic	novelGene_12412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	29784410	29784252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29784300_29784400
ES.14830.4	chr17	-	206	1	Intergenic	novelGene_12414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGAACCACTTTT	NA	False	NA	NA	False	NA	NA	NA	29827636	29827430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29827400_29827600
ES.14831.1	chr17	-	213	2	Antisense	novelGene_ENSMUSG00000117434.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCATGTATGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	30010574	29832565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29832762_30010557
ES.14831.10	chr17	-	4743	5	NIC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	-10	1606	intron_retention	FALSE	canonical	3	10	junction_1	117.737791299141	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGACTGAACTTGTTACC	NA	False	NA	NA	False	AATAAA	-25	NA	29936003	29914942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_29919227_29923228_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.11	chr17	-	4412	6	NNC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	5	1604	intron_retention	FALSE	non_canonical	0	0	junction_1	134.893439425348	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGACTGAACTTGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	29935977	29914944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29914982_29915284_29919227_29923228_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.12	chr17	-	8716	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	41	-7360	5	1603	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGACTGAACTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	29935977	29914945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.13	chr17	-	6774	5	NNC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	-8	1596	intron_retention	FALSE	canonical	0	0	junction_1	122.002817590415	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTAATTGTGACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	29935946	29914952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29919227_29921130_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.15	chr17	-	722	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	5	6390	4	149	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTAGGCACAGACCT	NA	False	NA	NA	False	ATTAAA	-17	NA	29935978	29918823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.16	chr17	-	623	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	-7	6501	3	38	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTTATCCTTGAGTAA	NA	False	NA	NA	False	NA	NA	NA	29935990	29918934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.17	chr17	-	438	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	19	940	-6	141	multi-exon	FALSE	canonical	3	251	junction_3	23.9072281027215	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCTGCTGACAAGGTG	NA	False	NA	-1	True	AATAAA	-28	NA	29935999	29923245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.18	chr17	-	179	1	Intergenic	novelGene_12419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAATGAATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	29932845	29932666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29932700_29932800
ES.14831.19	chr17	-	2917	1	Intergenic	novelGene_12420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGTGCATTTGTGA	NA	False	NA	NA	False	TTTAAA	-21	NA	30011309	30008392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30008400_30011300
ES.14831.2	chr17	-	182	1	Intergenic	novelGene_12415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAAAAGAT	9565	False	NA	NA	False	NA	NA	NA	29832783	29832601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29832600_29832800
ES.14831.3	chr17	-	163	1	Intergenic	novelGene_12416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3225	False	NA	NA	False	NA	NA	NA	29849530	29849367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29849400_29849500
ES.14831.4	chr17	-	172	1	Intergenic	novelGene_12417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGGATTCGAGGTTAGAA	1280	False	NA	NA	False	NA	NA	NA	29851475	29851303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_29851300_29851500
ES.14831.5	chr17	-	2154	11	NNC	ENSMUSG00000024018.19	novel	2971	4	NA	NA	26594	25142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGAGGAGCTGGAGACAT	NA	False	NA	NA	False	CATAAA	-38	NA	29909343	29881188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29882279_29893110_29893264_29895103_29895262_29897961_29898055_29899560_29899633_29900889_29900985_29901093_29901168_29904881_29905018_29906004_29906128_29908867_29908963_29909278
ES.14831.6	chr17	-	2180	11	NNC	ENSMUSG00000024018.19	novel	2971	4	NA	NA	26595	25109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-5	NA	29909342	29881221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_29882279_29893110_29893264_29895103_29895262_29897961_29898055_29899560_29899633_29900889_29900985_29901093_29901168_29904823_29905023_29906008_29906129_29908867_29908963_29909278
ES.14831.7	chr17	-	6324	1	Antisense	novelGene_ENSMUSG00000099329.3_AS_novelGene_ENSMUSG00000098374.2_AS_novelGene_ENSMUSG00000024019.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCACCTTTACTGTCTG	NA	False	NA	NA	False	NA	NA	NA	29897210	29890886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_29890900_29897200
ES.14831.8	chr17	-	7119	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	-7	5	3	-5	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATATGTTGTTTCTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	29935990	29912438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ES.14831.9	chr17	-	4603	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	5	2509	4	1606	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGACTGAACTTGTTACC	NA	False	NA	NA	False	AATAAA	-25	NA	29935978	29914942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ES.14832.1	chr17	-	3963	17	NIC	ENSMUSG00000043557.17	novel	8425	17	NA	NA	304	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	2.57921378524542	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCAGCACCTTCTTTAC	NA	False	NA	-1	True	ATTAAA	-19	NA	30107378	30051028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059871_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30076563_30076704_30106420
ES.14832.2	chr17	-	4196	17	FSM	ENSMUSG00000043557.17	ENSMUST00000171691.9	8425	17	122	4107	122	0	multi-exon	FALSE	canonical	0	0	junction_8	2.81666358481094	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCAGCACCTTCTTTA	NA	False	NA	-2	True	ATTAAA	-18	NA	30107560	30051029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30076563_30076704_30106420
ES.14832.3	chr17	-	5792	13	NNC	ENSMUSG00000043557.17	novel	8425	17	NA	NA	228	0	intron_retention	FALSE	canonical	0	0	junction_12	3.01385688667085	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCAGCACCTTCTTTA	NA	False	NA	-2	True	ATTAAA	-18	NA	30069287	30051029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059871_30061092_30061381_30061818_30065625_30068130_30068401_30068613_30068747_30069166
ES.14832.4	chr17	-	3425	16	NNC	ENSMUSG00000043557.17	novel	8425	17	NA	NA	-2689	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.27549826574353	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCAGCACCTTCTTTA	NA	False	NA	-2	True	ATTAAA	-18	NA	30072204	30051029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30071695
ES.14832.6	chr17	-	2188	4	NNC	ENSMUSG00000043557.17	novel	669	5	NA	NA	-2407	1456	intron_retention	FALSE	canonical	0	0	junction_3	2.16024689946929	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCTGAAAAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	30071922	30067157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30068747_30069465_30069663_30071415_30071591_30071695
ES.14833.1	chr17	+	208	1	Intergenic	novelGene_12421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATTTTAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	30154664	30154872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30154700_30154900
ES.14834.1	chr17	-	180	1	Intergenic	novelGene_12422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAAGCAATTTAAG	NA	False	NA	NA	False	NA	NA	NA	30157742	30157562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30157600_30157700
ES.14835.1	chr17	+	136	1	Intergenic	novelGene_12423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30219801	30219937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30219800_30219900
ES.14836.1	chr17	+	2985	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	-344	-1	-13	1	multi-exon	FALSE	canonical	2	8	junction_3	41.3037528561268	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGATTGTCTGTGTTGG	NA	False	NA	6	True	ATTAAA	-15	NA	30223693	30428995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
ES.14836.10	chr17	+	2597	6	NNC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.4902187288652	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30224129	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411696_30426998
ES.14836.11	chr17	+	1020	7	NNC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	18	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3016267405192	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATTTGTTTTGAGCA	NA	False	NA	5	True	ATTAAA	-6	NA	30224145	30427376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30224283_30278296_30278337_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.12	chr17	+	1857	6	NNC	ENSMUSG00000044477.13	novel	3489	5	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.3112777336832	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGCAGTGACTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	30224152	30429801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30224283_30354296_30354480_30372276_30372343_30411536_30411705_30426991_30427206_30428705
ES.14836.13	chr17	+	3344	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	499	-804	-9	-2	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACTTGCAGTGACTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	30224205	30429800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.14	chr17	+	2705	1	Intergenic	novelGene_12424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAAATAGGATGTGT	NA	False	NA	NA	False	NA	NA	NA	30229870	30232575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30229900_30232600
ES.14836.15	chr17	+	2463	5	ISM	ENSMUSG00000044477.13	ENSMUST00000234790.2	763	6	427	-1868	427	1	3prime_fragment	FALSE	canonical	3	100	junction_1	9.51314879522022	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGATTGTCTGTGTTGG	NA	False	NA	6	True	ATTAAA	-15	NA	30279782	30428995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.16	chr17	+	632	1	Intergenic	novelGene_12426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAACAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	30322789	30323421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30322800_30323400
ES.14836.17	chr17	+	2361	3	ISM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	130251	1	-875	-1	3prime_fragment	FALSE	canonical	2	8	junction_1	53	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30354288	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30354480_30411536_30411705_30426991
ES.14836.18	chr17	+	2381	4	NNC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	6389	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.4637018438386	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30361552	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30361698_30372276_30372343_30411536_30411705_30426991
ES.14836.19	chr17	+	2173	2	ISM	ENSMUSG00000044477.13	ENSMUST00000234902.2	2289	4	56370	1	-5016	-1	3prime_fragment	FALSE	canonical	3	114	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30411533	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30411705_30426991
ES.14836.2	chr17	+	3013	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	23	3	23	-1	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30223729	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.3	chr17	+	2553	5	NIC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	47.2195669188103	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGGATTGTCTGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	30224020	30428992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30426991
ES.14836.4	chr17	+	1001	4	FSM	ENSMUSG00000044477.13	ENSMUST00000226308.2	2565	4	0	1564	0	-10	multi-exon	FALSE	canonical	2	8	junction_2	49.2769948578667	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGCATGGCTAG	NA	False	NA	12	True	ATTAAA	-13	NA	30224024	30427383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30354296_30354480_30411536_30411705_30426991
ES.14836.5	chr17	+	1118	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	318	1603	0	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTAGTGGATTTACA	NA	False	NA	22	True	ATTAAA	-23	NA	30224024	30427393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.6	chr17	+	1040	5	FSM	ENSMUSG00000044477.13	ENSMUST00000226421.3	3489	5	23	2426	7	-17	multi-exon	FALSE	canonical	2	11	junction_1	47.3623004086584	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATTTGTTTTGAGCA	NA	False	NA	5	True	ATTAAA	-6	NA	30224044	30427376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ES.14836.7	chr17	+	996	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	26	1618	26	-17	multi-exon	FALSE	canonical	2	8	junction_3	41.3037528561268	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATTTGTTTTGAGCA	NA	False	NA	5	True	ATTAAA	-6	NA	30224063	30427376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
ES.14836.8	chr17	+	2535	4	FSM	ENSMUSG00000044477.13	ENSMUST00000226308.2	2565	4	76	-46	-27	-1	multi-exon	FALSE	canonical	2	8	junction_2	49.2769948578667	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGATTGTCTGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	30224100	30428993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30224283_30354296_30354480_30411536_30411705_30426991
ES.14836.9	chr17	+	844	5	NIC	ENSMUSG00000044477.13	novel	3039	6	NA	NA	-20	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	48.2979036812158	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGCATGGCTAGTG	NA	False	NA	14	True	ATTAAA	-15	NA	30224107	30427385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30224283_30279783_30279825_30372276_30372343_30411536_30411705_30426991
ES.14837.1	chr17	-	178	1	Intergenic	novelGene_12425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30245546	30245368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30245400_30245500
ES.14838.1	chr17	-	177	1	Intergenic	novelGene_12427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30327390	30327213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30327200_30327400
ES.14839.1	chr17	+	6184	1	Antisense	novelGene_ENSMUSG00000062202.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30444863	30451047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_30444900_30451000
ES.1484.1	chr1	+	3464	2	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAGAAAAAGAT	1440	False	NA	NA	False	NA	NA	NA	136663592	136667292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136664685_136664920
ES.14840.1	chr17	+	11175	1	Intergenic	novelGene_12428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30460874	30472049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30460900_30472000
ES.14841.1	chr17	+	3258	2	Antisense	novelGene_ENSMUSG00000062202.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTGTTTTCTGGATT	NA	False	NA	NA	False	NA	NA	NA	30499529	30503470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_30499607_30500289
ES.14842.1	chr17	+	2860	1	Antisense	novelGene_ENSMUSG00000062202.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTCTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	30513095	30515955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_30513100_30516000
ES.14843.1	chr17	+	1846	1	Intergenic	novelGene_12430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30521163	30523009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30521200_30523000
ES.14844.1	chr17	+	1770	1	Intergenic	novelGene_12433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAACAACAACAACAAAACT	NA	False	NA	NA	False	NA	NA	NA	30784905	30786675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30784900_30786700
ES.14845.1	chr17	+	1410	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	-278	5163	-278	-5160	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGTCCCCAATTTATT	795	False	NA	NA	False	AATACA	-14	NA	30794995	30796405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30795000_30796400
ES.14846.10	chr17	-	4759	11	NNC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	-5	3	intron_retention	FALSE	canonical	1	1	junction_10	32.6410784135574	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAGTGTTTCATTCCT	NA	False	NA	NA	False	ATTAAA	-21	NA	30795241	30436511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749276_30795119
ES.14846.11	chr17	-	4625	10	NIC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	-19	3	intron_retention	FALSE	canonical	1	2	junction_9	32.075528151113	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAGTGTTTCATTCCT	NA	False	NA	NA	False	ATTAAA	-21	NA	30795255	30436511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30795119
ES.14846.12	chr17	-	4619	10	NIC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_5	35.1708352803994	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTGTTTCATTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	30795158	30436512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.13	chr17	-	4978	11	NNC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_10	32.8695908097439	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTGTTTCATTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	30795239	30436512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30794961
ES.14846.14	chr17	-	4455	12	FSM	ENSMUSG00000062202.15	ENSMUST00000237037.2	2079	12	182	-2558	-5	0	multi-exon	FALSE	canonical	1	2	junction_1	32.1250140688782	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACAAGTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	30795241	30436514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30439119_30439483_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.16	chr17	-	2269	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	230	4559	1	16	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-12	NA	30795232	30439056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.17	chr17	-	2583	1	Intergenic	novelGene_12429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGAGACTGATTGTGC	NA	False	NA	NA	False	NA	NA	NA	30522231	30519648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30519600_30522200
ES.14846.18	chr17	-	2744	8	NNC	ENSMUSG00000062202.15	novel	1375	6	NA	NA	1	-17947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3772821977441	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAACAATAACT	NA	False	NA	NA	False	NA	NA	NA	30795232	30536508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30537849_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.19	chr17	-	1817	7	Fusion	ENSMUSG00000117962.2_ENSMUSG00000062202.15	novel	1375	6	NA	NA	-5	68	multi-exon	FALSE	canonical	0	0	junction_1	40.0641846153006	140	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGAGCTCCTCCACTGCCT	NA	False	NA	NA	False	NA	NA	NA	30795241	30614525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_30615040_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.2	chr17	-	7062	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	-5	1	-5	-1	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGAGTTTGTGCCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	30795467	30434498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.20	chr17	-	4433	1	Genic_Genomic	ENSMUSG00000062202.15	novel	NA	NA	NA	NA	10438	18	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGTAATCCATGAGTT	NA	False	NA	NA	False	AAAAAG	-5	NA	30700246	30695813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_30695800_30700200
ES.14846.21	chr17	-	6423	1	Intergenic	novelGene_12431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATACTTGTATCCCTA	NA	False	NA	NA	False	NA	NA	NA	30718390	30711967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30712000_30718400
ES.14846.22	chr17	-	160	1	Intergenic	novelGene_12432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30752168	30752008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30752000_30752200
ES.14846.4	chr17	-	5105	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	-5	1958	-5	59	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACGTGTTTGTTAGACT	NA	False	NA	NA	False	AAGAAA	-17	NA	30795467	30436455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.5	chr17	-	4799	12	FSM	ENSMUSG00000062202.15	ENSMUST00000079924.8	2007	12	-272	-2520	8	5	multi-exon	FALSE	canonical	3	6	junction_1	31.2708773237183	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30795415	30436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30439119_30439318_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14846.6	chr17	-	4861	11	NNC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	14577	5	intron_retention	TRUE	canonical	0	0	junction_10	32.8695908097439	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30776227	30436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30776069
ES.14846.7	chr17	-	4806	11	NNC	ENSMUSG00000062202.15	novel	7058	11	NA	NA	-12	5	intron_retention	FALSE	canonical	2	10	junction_10	30.6400065274144	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30795248	30436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749314_30795119
ES.14846.8	chr17	-	3397	4	NNC	ENSMUSG00000062202.15	novel	3480	4	NA	NA	11864	5	intron_retention	FALSE	canonical	1	2	junction_3	31.8468557666565	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30499442	30436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30499267
ES.14846.9	chr17	-	4923	12	NNC	ENSMUSG00000062202.15	novel	2007	12	NA	NA	-40	5	intron_retention	FALSE	canonical	0	0	junction_5	39.5768945031365	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGTTTCATTCCTAG	NA	False	NA	NA	False	ATTAAA	-23	NA	30795276	30436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30647060_30647124_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ES.14847.1	chr17	+	170	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	6115	10	5947	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATAATCTGATTATG	719	False	NA	NA	False	NA	NA	NA	30801388	30801558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30801400_30801600
ES.14848.1	chr17	-	172	1	ISM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	24534	3018	9414	-3018	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30807099	30806927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_30806900_30807100
ES.14849.1	chr17	+	191	1	Antisense	novelGene_ENSMUSG00000024026.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATGCTAACATCAGTA	8452	False	NA	NA	False	NA	NA	NA	30809121	30809312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_30809100_30809300
ES.1485.1	chr1	+	4374	3	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAG	650	False	NA	NA	False	NA	NA	NA	136675344	136680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136675614_136675822_136678645_136678750
ES.14850.1	chr17	+	321	1	Antisense	novelGene_ENSMUSG00000024026.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30815476	30815797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_30815500_30815800
ES.14851.1	chr17	+	175	1	Intergenic	novelGene_12434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	30824785	30824960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30824800_30825000
ES.14852.1	chr17	+	159	1	Intergenic	novelGene_12435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCCTT	NA	False	NA	NA	False	NA	NA	NA	30842440	30842599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30842400_30842600
ES.14853.1	chr17	+	2374	12	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	0	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	17.5673438586468	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	200	False	NA	NA	False	NA	NA	NA	30845909	30878157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30877730
ES.14853.10	chr17	+	4464	29	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	11	107719	-6	-21290	5prime_fragment	FALSE	canonical	3	31	junction_2	9.71139662920818	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTCTGTAATACATTTC	211	False	NA	NA	False	AATAGA	-19	NA	30845920	30927568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264
ES.14853.11	chr17	+	3990	27	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	5	20359	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_26	14.0687239678245	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGTTTCTGACCCTTGA	222	False	NA	NA	False	NA	NA	NA	30845931	30923884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30920921_30923628
ES.14853.12	chr17	+	15061	93	FSM	ENSMUSG00000033826.11	ENSMUST00000236140.2	16685	93	27	1597	9	504	multi-exon	FALSE	canonical	2	15	junction_44	14.4763185797332	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCAAATATTATCCTT	226	False	NA	23	True	AATAAA	-44	NA	30845935	31094742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.13	chr17	+	6406	42	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	9	1583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3563238599529	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTTCTTTTTGCTG	226	False	NA	NA	False	AAGAAA	-18	NA	30845935	30950441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846038_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.14	chr17	+	3791	25	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	13	16078	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	12.3209397188508	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACCTTGCTTCTATGTG	230	False	NA	NA	False	AATAAA	-41	NA	30845939	30919603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363
ES.14853.15	chr17	+	3746	25	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	14	13819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	13.3556453939482	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGGCACAAACCTGT	231	False	NA	NA	False	ATTAAA	-17	NA	30845940	30917344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30917154
ES.14853.16	chr17	+	3313	19	NNC	ENSMUSG00000033826.11	novel	13478	83	NA	NA	14	-594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.2759402189769	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATTTATGGCTGCTTC	231	False	NA	NA	False	AGTAAA	-21	NA	30845940	30902931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846221_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604
ES.14853.17	chr17	+	3553	21	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3114846272641	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGATTTGGGTCCTTTC	233	False	NA	NA	False	AATAAA	-19	NA	30845942	30903581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30850474_30850590_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104
ES.14853.18	chr17	+	7422	42	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	33	83902	16	2527	5prime_fragment	FALSE	canonical	3	31	junction_2	8.98779660455654	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGGGAACCAATTGATTTA	233	False	NA	NA	False	TATAAA	-19	NA	30845942	30951385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.19	chr17	+	10401	67	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	3137	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	12.1027510931209	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCCTGCAGACTGTGT	233	False	NA	NA	False	AATAAA	-10	NA	30845942	30992759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502
ES.14853.2	chr17	+	6503	42	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	0	1580	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_38	12.6263277436594	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTTTTTTCTTTTTG	200	False	NA	NA	False	AAGAAA	-15	NA	30845909	30950438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945758_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.20	chr17	+	3956	27	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	20331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	14.901103966092	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCATTTGTTATTTAT	233	False	NA	NA	False	NA	NA	NA	30845942	30923856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914190_30919363_30919437_30920818_30920921_30923628
ES.14853.21	chr17	+	6578	41	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.488010053965	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTAGCGTTTAGTCTT	233	False	NA	NA	False	AATAAA	-39	NA	30845942	30948853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846034_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14853.22	chr17	+	3213	19	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	33	132350	16	-588	5prime_fragment	FALSE	canonical	3	31	junction_2	9.0921211313239	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTGCTTCCACGAC	233	False	NA	NA	False	AGTAAA	-27	NA	30845942	30902937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604
ES.14853.23	chr17	+	3105	11	FSM	ENSMUSG00000033826.11	ENSMUST00000237551.2	3099	11	34	-40	16	40	multi-exon	FALSE	canonical	3	31	junction_2	9.52942810456116	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACGTGCCAGGACAGGA	233	False	NA	NA	False	NA	NA	NA	30845942	30878235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942
ES.14853.24	chr17	+	9632	58	NIC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	8338	combination_of_known_splicesites	FALSE	canonical	1	1	junction_57	12.870427019294	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGTTCTCTCATCTGT	233	False	NA	NA	False	ATTAAA	-19	NA	30845942	30978086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30977218
ES.14853.25	chr17	+	6736	43	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	-4258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	11.5495580109991	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTAGTCTCCTGTAT	233	False	NA	NA	False	AAGAAA	-21	NA	30845942	30955493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872380_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002
ES.14853.26	chr17	+	14623	93	NNC	ENSMUSG00000033826.11	novel	14604	93	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	15.8099236620667	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	244	False	NA	24	True	ATTAAA	-15	NA	30845953	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846200_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945758_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.27	chr17	+	4612	28	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.7770799594747	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCGTTTAGTCTTTTCAT	271	False	NA	NA	False	AATAAA	-44	NA	30845980	30948858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854605_30891271_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14853.28	chr17	+	4496	29	NNC	ENSMUSG00000033826.11	novel	13478	83	NA	NA	30	-21289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	15.2698515823481	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGTAATACATTTCT	285	False	NA	NA	False	AATAGA	-20	NA	30845994	30927569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846221_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914192_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264
ES.14853.29	chr17	+	3103	16	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	113	143327	58	-1052	5prime_fragment	FALSE	canonical	3	31	junction_2	9.50415113983826	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGGAGTAATTTTGTT	313	False	NA	NA	False	NA	NA	NA	30846022	30891960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213
ES.14853.3	chr17	+	14583	93	FSM	ENSMUSG00000033826.11	ENSMUST00000236140.2	16685	93	1	2101	0	0	multi-exon	TRUE	canonical	2	15	junction_44	14.4763185797332	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	200	False	NA	24	True	ATTAAA	-15	NA	30845909	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.31	chr17	+	6366	42	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	88	1579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	11.3308368784679	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTTTTTTCTTTTT	343	False	NA	NA	False	AAGAAA	-14	NA	30846052	30950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889583_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.32	chr17	+	177	1	Intergenic	novelGene_12436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTATTTTCAA	1848	False	NA	NA	False	NA	NA	NA	30847557	30847734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30847600_30847700
ES.14853.33	chr17	+	184	1	Intergenic	novelGene_12437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATAACACTCGGGG	NA	False	NA	NA	False	NA	NA	NA	30862550	30862734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_30862600_30862700
ES.14853.34	chr17	+	6295	37	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	17600	85859	8835	570	internal_fragment	FALSE	canonical	3	32	junction_22	8.79652533814866	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCCAAAC	NA	False	NA	NA	False	NA	NA	NA	30863564	30949428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14853.35	chr17	+	13514	89	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	8903	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	15.2744181964378	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGCTCGCCTGTCTCT	NA	False	NA	21	True	ATTAAA	-12	NA	30863632	31094235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939996_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.36	chr17	+	2851	12	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	22655	137797	-13712	4478	internal_fragment	FALSE	canonical	3	35	junction_9	8.89609441652732	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTCTGATTACTTTT	NA	False	NA	NA	False	NA	NA	NA	30868619	30897490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060
ES.14853.37	chr17	+	5202	35	NIC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	-13699	1654	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	11.1231312337357	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATAGGGTCTTACTGT	NA	False	NA	NA	False	AATGAA	-14	NA	30868632	30950512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.38	chr17	+	7382	45	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	43645	57201	-4	8338	internal_fragment	FALSE	canonical	2	15	junction_30	10.6864351724144	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGTTCTCTCATCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30889609	30978086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218
ES.14853.39	chr17	+	3083	21	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	19654	1584	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	9.58384056628656	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTCTTTTTGCTGT	7423	False	NA	NA	False	AAGAAA	-19	NA	30909267	30950442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30920921_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.4	chr17	+	3469	20	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	0	60	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_1	12.9629773263489	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGGGTCCTTTCCCTC	200	False	NA	NA	False	AATAAA	-23	NA	30845909	30903585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30846111_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104
ES.14853.40	chr17	+	10961	69	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	23307	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.1328446380729	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	NA	False	NA	24	True	ATTAAA	-15	NA	30912920	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30913036_30914083_30914191_30919363_30919437_30920818_30921092_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30977218_30977383_30978543_30978730_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022289_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.41	chr17	+	3733	15	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	77721	85491	-16329	938	internal_fragment	FALSE	canonical	3	32	junction_1	6.85565460040104	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCGTATGTATGTGT	4086	False	NA	NA	False	AATAAA	-22	NA	30923685	30949796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14853.42	chr17	+	12857	64	NIC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-12661	485	intron_retention	FALSE	canonical	2	15	junction_16	16.2184632056442	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTCCCATATCTAGGT	7754	False	NA	4	True	AATAAA	-25	NA	30927353	31094723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.43	chr17	+	5457	10	NIC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	-10509	882	intron_retention	FALSE	canonical	3	32	junction_4	7.1457489736949	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTCAATTCTGCCTG	9906	False	NA	NA	False	GATAAA	-18	NA	30929505	30949740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14853.45	chr17	+	5149	31	NIC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	-42	3134	combination_of_known_splicesites	FALSE	canonical	1	1	junction_30	11.7579287669593	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGAGCCTGCAGACTG	1417	False	NA	NA	False	AATAAA	-7	NA	30939972	30992756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30992502
ES.14853.46	chr17	+	5000	31	NNC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	107	1400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	12.2009107128207	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGACTGTGTGTGGA	1566	False	NA	NA	False	NA	NA	NA	30940121	30991022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977385_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770
ES.14853.47	chr17	+	8842	55	NIC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	4147	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	18.1064145997231	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGCTCGCCTGTCTCTT	5606	False	NA	22	True	ATTAAA	-13	NA	30944161	31094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.48	chr17	+	2540	1	NIC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	6953	649	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAACAA	8412	False	NA	NA	False	TTTAAA	-24	NA	30946967	30949507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30947000_30949500
ES.14853.49	chr17	+	9810	50	NIC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-7998	0	intron_retention	FALSE	canonical	0	0	junction_22	19.1367424201189	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	NA	False	NA	24	True	ATTAAA	-15	NA	30949988	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30981746_30984569_30984724_30986772_30986938_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.5	chr17	+	3962	16	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	0	142581	0	-306	5prime_fragment	TRUE	canonical	3	31	junction_2	9.50415113983826	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTCTCCTTCCACCC	200	False	NA	NA	False	AATAAA	-28	NA	30845909	30892706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213
ES.14853.50	chr17	+	8047	50	NIC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-2886	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_32	18.3940395611892	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	494	False	NA	24	True	ATTAAA	-15	NA	30955100	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.51	chr17	+	6845	40	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	110277	140	-1745	-140	3prime_fragment	FALSE	canonical	2	15	junction_1	12.6939910823566	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAAGTATTGATGATTT	1635	False	NA	NA	False	AATAAA	-20	NA	30956241	31035147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605
ES.14853.52	chr17	+	8867	51	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-1720	-422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	19.4887044207664	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCCTTGGTCCCTGTGT	1660	False	NA	NA	False	NA	NA	NA	30956266	31095917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977385_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815_31094100_31094999
ES.14853.53	chr17	+	7577	42	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	632	4516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	15.3867840415399	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGGGGCTTCTTCCTG	4012	False	NA	NA	False	CATAAA	-25	NA	30958618	31039803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988740_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31038549
ES.14853.55	chr17	+	7139	41	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	112749	-497	804	497	3prime_fragment	FALSE	canonical	2	20	junction_4	15.8151628192694	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGGTTTGTTCAAATAT	NA	False	NA	16	True	AATAAA	-37	NA	30967478	31094735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.57	chr17	+	6553	41	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	3753	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_39	18.395634672389	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGCTCGCCTGTCTCT	NA	False	NA	21	True	ATTAAA	-12	NA	30970427	31094235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31092301_31092464_31093815
ES.14853.59	chr17	+	5028	31	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-3823	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	16.5994979843769	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTCGCCTGTCTCTTC	574	False	NA	23	True	ATTAAA	-14	NA	30984669	31094237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093751
ES.14853.6	chr17	+	4091	27	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	0	111415	0	20347	5prime_fragment	FALSE	canonical	3	31	junction_2	9.66877485003099	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTCGCTCTATTCGTT	200	False	NA	NA	False	NA	NA	NA	30845909	30923872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628
ES.14853.60	chr17	+	5927	30	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	131024	3	-2739	-2	3prime_fragment	FALSE	canonical	3	35	junction_12	14.1736302859066	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTGCTCGCCTGTCTCT	1658	False	NA	21	True	ATTAAA	-12	NA	30985753	31094235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.61	chr17	+	3807	19	ISM	ENSMUSG00000033826.11	ENSMUST00000235627.2	13478	83	142697	-232	169	232	3prime_fragment	FALSE	canonical	3	35	junction_11	8.89374867151635	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAATGATGTGCAATTA	4566	False	NA	NA	False	AATAAA	-21	NA	30988661	31035519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605
ES.14853.62	chr17	+	3344	20	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	133961	56799	198	2152	internal_fragment	FALSE	canonical	3	35	junction_11	8.79215212892565	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCAGCAGAGTGTATT	4595	False	NA	NA	False	AATAAA	-26	NA	30988690	31037439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033
ES.14853.63	chr17	+	3534	20	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	4067	11467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	14.6304429699119	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	8464	False	NA	NA	False	NA	NA	NA	30992559	31046754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31046138
ES.14853.64	chr17	+	4967	25	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-1084	495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	20.9204428862191	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTAGGTTTGTTCAAAT	NA	False	NA	14	True	AATAAA	-35	NA	30997622	31094733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022289_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052533_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.65	chr17	+	3655	22	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	148247	2	4270	-1	3prime_fragment	FALSE	canonical	3	35	junction_4	13.8859951634013	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGCTCGCCTGTCTCTT	1037	False	NA	22	True	ATTAAA	-13	NA	31002976	31094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.66	chr17	+	4092	22	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	148306	-494	4329	494	3prime_fragment	FALSE	canonical	3	35	junction_4	13.8859951634013	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCTAGGTTTGTTCAAA	1096	False	NA	13	True	AATAAA	-34	NA	31003035	31094732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.67	chr17	+	3504	19	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-9471	502	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	18.8479949485415	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGTTCAAATATTATCC	7940	False	NA	21	True	AATAAA	-42	NA	31009879	31094740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073834_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.69	chr17	+	2931	17	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	164599	0	-22	0	3prime_fragment	FALSE	canonical	3	38	junction_6	12.5882820015282	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	NA	False	NA	24	True	ATTAAA	-15	NA	31019328	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.7	chr17	+	6601	42	NIC	ENSMUSG00000033826.11	novel	13457	83	NA	NA	0	1590	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.0795082326328	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTTGCTGTTGTTAT	200	False	NA	NA	False	AAGAAA	-25	NA	30845909	30950448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_30846200_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987
ES.14853.70	chr17	+	3398	18	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	173	500	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	23.2215149016006	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTTGTTCAAATATTAT	NA	False	NA	19	True	AATAAA	-40	NA	31019523	31094738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31092301_31092464_31093815
ES.14853.71	chr17	+	3031	15	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	168145	-496	-18	496	3prime_fragment	FALSE	canonical	3	38	junction_4	12.7415438144485	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAGGTTTGTTCAAATA	NA	False	NA	15	True	AATAAA	-36	NA	31022874	31094734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.72	chr17	+	2804	14	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	171394	-497	3231	497	3prime_fragment	FALSE	canonical	3	38	junction_3	13.1792377508074	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGGTTTGTTCAAATAT	NA	False	NA	16	True	AATAAA	-37	NA	31026123	31094735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ES.14853.73	chr17	+	2415	6	ISM	ENSMUSG00000033826.11	ENSMUST00000236647.2	13856	91	171417	54434	3254	4517	internal_fragment	FALSE	canonical	3	38	junction_3	9.51630180269625	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGGGGCTTCTTCCTGT	NA	False	NA	NA	False	CATAAA	-26	NA	31026146	31039804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092
ES.14853.74	chr17	+	2491	5	NNC	ENSMUSG00000033826.11	novel	13856	91	NA	NA	-2567	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	34.5714839137692	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTCTCTTCCTCCCAT	776	False	NA	30	True	ATTAAA	-21	NA	31070675	31094244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31092301
ES.14853.75	chr17	+	506	2	NNC	ENSMUSG00000033826.11	novel	14583	93	NA	NA	19979	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCGCCTGTCTCTTCC	NA	False	NA	24	True	ATTAAA	-15	NA	31093467	31094238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31093551_31093815
ES.14853.8	chr17	+	2863	15	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	1	145207	1	-2932	5prime_fragment	FALSE	canonical	3	31	junction_2	9.05115845556551	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTGGACACAGTCT	201	False	NA	NA	False	NA	NA	NA	30845910	30890080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585
ES.14853.9	chr17	+	6696	41	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	3	86429	3	0	5prime_fragment	FALSE	canonical	3	31	junction_2	9.07689374180397	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCGTTTAGTCTTTTCAT	203	False	NA	NA	False	AATAAA	-44	NA	30845912	30948858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909291_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054
ES.14854.1	chr17	-	3557	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	-3	6311	-3	1614	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAGTCATGAGGCTGG	NA	False	NA	-6	True	NA	NA	NA	30831636	30810220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.10	chr17	-	1724	5	NIC	ENSMUSG00000024026.14	novel	895	7	NA	NA	45	0	intron_retention	FALSE	canonical	3	11	junction_4	1328.21157953091	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30821284	30811839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30821220
ES.14854.11	chr17	-	1920	6	NNC	ENSMUSG00000024026.14	novel	895	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	7	junction_1	1293.27639737219	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831594	30811839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813225_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.12	chr17	-	987	8	ISM	ENSMUSG00000024026.14	ENSMUST00000236619.2	1196	9	14189	5	-8	0	3prime_fragment	FALSE	canonical	3	9	junction_5	1489.39013679823	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831594	30811839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822360_30822492_30822993_30823077_30831441
ES.14854.13	chr17	-	1915	6	FSM	ENSMUSG00000024026.14	ENSMUST00000235171.2	898	6	-17	-1000	-7	0	multi-exon	FALSE	canonical	3	18	junction_3	1306.85751327373	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831593	30811839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816867_30819012_30819154_30822993_30823077_30831441
ES.14854.14	chr17	-	1839	6	Fusion	ENSMUSG00000024026.14_ENSMUSG00000099474.2	novel	895	7	NA	NA	-6	0	intron_retention	FALSE	canonical	1	17	junction_5	1224.3735377735	1132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30845851	30811839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30845755
ES.14854.16	chr17	-	2035	7	NIC	ENSMUSG00000024026.14	novel	1764	8	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	13	junction_3	1361.55764557444	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGGTCTGGGCAGCA	NA	False	NA	-19	True	AATAAA	-17	NA	30831596	30811841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30812049_30813088_30813201_30815347_30816617_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.18	chr17	-	1342	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	64	8459	2	471	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTGAAGGCTTGGGC	NA	False	NA	NA	False	NA	NA	NA	30831569	30812368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.19	chr17	-	1273	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	19	8573	19	357	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTTTACTTTTCTGGG	NA	False	NA	NA	False	TATAAA	-20	NA	30831614	30812482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.2	chr17	-	2017	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	-3	7851	-3	74	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGGGATACACATGAGT	NA	False	NA	62	True	NA	NA	NA	30831636	30811760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.20	chr17	-	1300	6	FSM	ENSMUSG00000024026.14	ENSMUST00000235171.2	898	6	-49	-353	8	353	multi-exon	FALSE	canonical	3	18	junction_3	1306.85751327373	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTAACTTTACTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30831625	30812486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816867_30819012_30819154_30822993_30823077_30831441
ES.14854.21	chr17	-	2438	6	NIC	ENSMUSG00000024026.14	novel	1764	8	NA	NA	-18	353	intron_retention	FALSE	canonical	3	13	junction_2	1288.4467548176	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTAACTTTACTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30831604	30812486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30816617_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.22	chr17	-	2591	5	NIC	ENSMUSG00000024026.14	novel	1764	8	NA	NA	-9	353	intron_retention	FALSE	canonical	3	2881	junction_2	269.486896712994	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTAACTTTACTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30831595	30812486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.23	chr17	-	4581	6	NIC	ENSMUSG00000024026.14	novel	2024	7	NA	NA	-2	353	intron_retention	FALSE	canonical	3	40	junction_4	1287.01241641252	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTAACTTTACTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30831588	30812486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30822492_30822993_30823077_30831441
ES.14854.24	chr17	-	1358	7	NNC	ENSMUSG00000024026.14	novel	2024	7	NA	NA	-18	350	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1516.11971822808	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGGACTAACTTTACTT	NA	False	NA	NA	False	TATAAA	-13	NA	30831604	30812489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30814798_30814901_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.25	chr17	-	1081	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	37	8747	-10	183	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGATTTTTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	30831596	30812656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.26	chr17	-	3264	6	NNC	ENSMUSG00000024026.14	novel	2024	7	NA	NA	-9	80	intron_retention	FALSE	canonical	0	0	junction_4	1628.29451881409	982	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTGTTTCAAATGT	NA	False	NA	NA	False	NA	NA	NA	30831595	30812759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30815347_30815438_30816778_30819154_30822360_30822482_30822993_30823077_30831441
ES.14854.27	chr17	-	989	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	10	8866	10	64	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGATTCATCATTTAGA	NA	False	NA	NA	False	NA	NA	NA	30831623	30812775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.28	chr17	-	966	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	-68	8967	-68	-37	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAAGTTGTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	30831701	30812876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.29	chr17	-	3023	5	NIC	ENSMUSG00000024026.14	novel	898	6	NA	NA	-7	-38	intron_retention	FALSE	canonical	3	3068	junction_3	212.97344318013	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAAAGTTGTGTGACTT	NA	False	NA	NA	False	NA	NA	NA	30831593	30812877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30815438_30816778_30819154_30822993_30823077_30831441
ES.14854.3	chr17	-	881	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	19	-5	19	0	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30831614	30811834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.30	chr17	-	851	6	NNC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	-9	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1231.14993400479	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACAAAGTTGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	30831595	30812878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831448
ES.14854.31	chr17	-	602	4	NNC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	-8	-3016	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1689.06213292729	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGGCTGCATTGTCTC	NA	False	NA	NA	False	NA	NA	NA	30831594	30822040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30822276_30822360_30822492_30822993_30823077_30831441
ES.14854.32	chr17	-	3575	4	FSM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	76	-2806	76	2806	multi-exon	FALSE	canonical	3	145	junction_3	117.235754879739	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCTTAATCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	30845803	30838608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755
ES.14854.33	chr17	-	5250	2	NIC	ENSMUSG00000099474.2	novel	845	4	NA	NA	1704	2756	intron_retention	FALSE	canonical	3	280	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCCCCCTAGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	30844175	30838658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30843588_30843854
ES.14854.34	chr17	-	3753	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-847	2756	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCCCCCTAGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	30846726	30838658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30841669_30845755_30846170_30846397
ES.14854.35	chr17	-	1293	5	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-661	15	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_3	110.320838919943	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAAGAGCCAAGGGA	NA	False	NA	14	True	AATAAA	-40	NA	30846540	30841399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755_30846170_30846397
ES.14854.37	chr17	-	1024	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-882	-8	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	123	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCGAATTCTTTCCT	NA	False	NA	-9	True	AATAAA	-17	NA	30846761	30841422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30841669_30845755_30846170_30846397
ES.14854.38	chr17	-	754	4	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-831	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.929364436772	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCGAATTCTTTCCT	NA	False	NA	-9	True	AATAAA	-17	NA	30846710	30841422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30841669_30845755_30846170_30846397_30846451_30846669
ES.14854.39	chr17	-	3617	3	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	40	-10	intron_retention	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30845839	30841424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30843745_30843790_30844353_30845104
ES.14854.4	chr17	-	2061	5	NNC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	27	2	intron_retention	FALSE	canonical	2	4	junction_4	1331.23145526989	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	-15	True	AATAAA	-21	NA	30821302	30811837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30820903
ES.14854.40	chr17	-	2555	2	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-683	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACCGAATTCTTTC	NA	False	NA	-11	True	AATAAA	-15	NA	30846562	30841424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30842647_30845229
ES.14854.41	chr17	-	2422	2	NIC	ENSMUSG00000099474.2	novel	845	4	NA	NA	1765	-11	intron_retention	FALSE	canonical	3	280	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGACCGAATTCTTT	NA	False	NA	-12	True	AATAAA	-14	NA	30844114	30841425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30843588_30843854
ES.14854.42	chr17	-	2738	2	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-868	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTGACCGAATTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	30846747	30841426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30842683_30845265
ES.14854.43	chr17	-	1224	2	NNC	ENSMUSG00000099474.2	novel	845	4	NA	NA	-809	-3822	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_1	0	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAATAATAATT	NA	False	NA	NA	False	NA	NA	NA	30846688	30845236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30846170_30846397
ES.14854.5	chr17	-	4076	5	NIC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	8	2	intron_retention	FALSE	canonical	3	2881	junction_2	268.99198408131	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	-15	True	AATAAA	-21	NA	30831625	30811837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.6	chr17	-	1900	6	NNC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	-3	2	intron_retention	FALSE	non_canonical	0	0	junction_2	1293.55531771935	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	-15	True	AATAAA	-21	NA	30831579	30811837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30815347_30815455_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14854.7	chr17	-	4075	5	NIC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	-19	2	intron_retention	FALSE	canonical	3	3068	junction_3	212.97344318013	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCTGGGCAGCAAGTC	NA	False	NA	-15	True	AATAAA	-21	NA	30831605	30811837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_30813201_30815347_30815438_30816778_30819154_30822993_30823077_30831441
ES.14854.9	chr17	-	1902	6	NNC	ENSMUSG00000024026.14	novel	9865	6	NA	NA	-20	1	intron_retention	FALSE	non_canonical	0	0	junction_1	1296.02762316241	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTGGGCAGCAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	30831606	30811838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_30813201_30815354_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ES.14855.1	chr17	-	221	1	Intergenic	novelGene_12438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGTACCTCATGAATG	NA	False	NA	NA	False	NA	NA	NA	30863913	30863692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_30863700_30863900
ES.14856.1	chr17	-	3103	1	Antisense	novelGene_ENSMUSG00000033826.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAATCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	30884047	30880944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_30880900_30884000
ES.14857.1	chr17	-	3508	1	Antisense	novelGene_ENSMUSG00000033826.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGATATGCTGGCATGTG	NA	False	NA	NA	False	NA	NA	NA	30970178	30966670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_30966700_30970200
ES.14858.1	chr17	-	751	1	Intergenic	novelGene_12439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31020393	31019642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31019600_31020400
ES.14859.1	chr17	-	648	1	Intergenic	novelGene_12440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAGCAAGCCACGAGGA	NA	False	NA	NA	False	NA	NA	NA	31092915	31092267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31092300_31092900
ES.1486.1	chr1	-	205	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCATAATGTAACACAGC	1563	False	NA	NA	False	NA	NA	NA	136683677	136683472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136683500_136683700
ES.14860.1	chr17	+	3965	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	0	1846	0	1378	multi-exon	TRUE	canonical	0	0	junction_2	2.40947204913349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGACTGCCTTCTCTTTC	5253	False	NA	NA	False	NA	NA	NA	31120790	31157919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
ES.14860.2	chr17	+	5806	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_2	2.40947204913349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATTTCGAGAGCTTTCC	5253	False	NA	NA	False	AATAAA	-18	NA	31120790	31159760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
ES.14860.3	chr17	+	2851	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	3	2957	3	267	multi-exon	FALSE	canonical	0	0	junction_2	2.40947204913349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCCTTGTTGTCTCGA	5256	False	NA	NA	False	AAGAAA	-17	NA	31120793	31156808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
ES.14860.4	chr17	+	4635	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	3	1173	3	-1173	multi-exon	FALSE	canonical	0	0	junction_2	2.40947204913349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCGGTGAAATACACAT	5256	False	NA	NA	False	NA	NA	NA	31120793	31158592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
ES.14861.1	chr17	-	165	1	NIC	ENSMUSG00000117786.2	novel	4014	3	NA	NA	39310	-3408	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1395	False	NA	NA	False	NA	NA	NA	31142884	31142719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31142700_31142900
ES.14862.1	chr17	+	180	1	Intergenic	novelGene_12441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTATATTGAAA	7159	False	NA	NA	False	NA	NA	NA	31160028	31160208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31160000_31160200
ES.14863.1	chr17	+	3789	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	-168	2211	-156	1289	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	31276492	31334751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14863.10	chr17	+	2286	5	NNC	ENSMUSG00000024030.8	novel	644	3	NA	NA	-393	1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.795715776557	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAAAGGTCTTCATTT	3977	False	NA	NA	False	ATTAAA	-9	NA	31329545	31334742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31329741_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14863.2	chr17	+	3737	15	NNC	ENSMUSG00000024030.8	novel	5832	15	NA	NA	-150	1269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.345313441558	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAACACCAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	31276498	31334731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330220_31330354_31331902_31332022_31333030
ES.14863.3	chr17	+	5982	16	NNC	ENSMUSG00000024030.8	novel	5832	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.086719307077	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACGTGCATTTGGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	31276650	31336958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31276831_31277817_31277962_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14863.4	chr17	+	5819	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	9	4	9	-4	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACGTGCATTTGGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	31276669	31336958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14863.5	chr17	+	3771	14	NIC	ENSMUSG00000024030.8	novel	5832	15	NA	NA	13	1289	intron_retention	FALSE	canonical	3	27	junction_11	5.11986501301346	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	31276673	31334751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330354_31331902_31332022_31333030
ES.14863.6	chr17	+	2614	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	42	3176	2	324	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTATCTTTTTAGTAC	NA	False	NA	NA	False	GATAAA	-17	NA	31276702	31333786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14863.7	chr17	+	1366	3	FSM	ENSMUSG00000024030.8	ENSMUST00000236427.2	1372	3	2	4	2	-4	multi-exon	FALSE	canonical	1	1	junction_2	17	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTGCTTCTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	31276702	31302571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31276831_31283358_31283603_31301577
ES.14863.9	chr17	+	3656	16	NNC	ENSMUSG00000024030.8	novel	5832	15	NA	NA	2	1269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.086719307077	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAACACCAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	31276749	31334731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31276831_31277817_31277962_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ES.14864.1	chr17	-	813	1	Antisense	novelGene_ENSMUSG00000024030.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAACCGTCCTACATCT	NA	False	NA	NA	False	NA	NA	NA	31334287	31333474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_31333500_31334300
ES.14865.1	chr17	+	153	1	Intergenic	novelGene_12442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	31339767	31339920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31339800_31339900
ES.14866.1	chr17	+	6103	5	NNC	ENSMUSG00000086010.9	novel	359	2	NA	NA	-912	5176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGGCTTAACTGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	31377110	31387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31377840_31378005_31378053_31380394_31380463_31381045_31381261_31382160
ES.14866.2	chr17	+	5898	4	NNC	ENSMUSG00000086010.9	novel	359	2	NA	NA	-901	5176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGGCTTAACTGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	31377121	31387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31377840_31377984_31378053_31380394_31380463_31382160
ES.14866.3	chr17	+	5900	4	NNC	ENSMUSG00000086010.9	novel	359	2	NA	NA	-892	5178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGCTTAACTGGCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	31377130	31387206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31377840_31377984_31378062_31380394_31380463_31382160
ES.14867.1	chr17	+	2725	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	-57	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCTTATGATTCTATTC	NA	False	NA	NA	False	NA	NA	NA	31431029	31461065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.10	chr17	+	4682	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	2015	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	31431086	31463079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.11	chr17	+	2986	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	319	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGCTCAGGTCGTTTTC	NA	False	NA	8	True	CATAAA	-21	NA	31431086	31461383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.12	chr17	+	1452	5	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	33	-1889	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.59545297913646	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGGTGGTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	31431119	31439237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555
ES.14867.13	chr17	+	4987	5	NNC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	1649	-832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.3691536926817	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31456105	31465034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31456254_31456861_31456969_31458149_31458260_31460214_31463763_31463960
ES.14867.14	chr17	+	171	1	Intergenic	novelGene_12443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGCATGTGGACA	NA	False	NA	NA	False	NA	NA	NA	31459531	31459702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31459500_31459700
ES.14867.15	chr17	+	1665	1	ISM	ENSMUSG00000042345.16	ENSMUST00000236745.2	7635	14	36766	589	9156	-589	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAATCTCTGGTCTCCCG	NA	False	NA	NA	False	NA	NA	NA	31463612	31465277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31463600_31465300
ES.14867.16	chr17	+	171	1	ISM	ENSMUSG00000042345.16	ENSMUST00000236745.2	7635	14	36928	1921	9318	-1921	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	31463774	31463945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31463800_31463900
ES.14867.2	chr17	+	2721	13	NNC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	-43	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.9045734543916	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATGATTCTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	31431043	31461068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456101_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.3	chr17	+	4336	12	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	-36	312	intron_retention	FALSE	canonical	0	0	junction_2	11.2837189813282	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACACTTCGCTCAGGT	NA	False	NA	1	True	CATAAA	-14	NA	31431050	31461376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431206_31432705_31432893_31434120_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.4	chr17	+	6508	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	-27	-3942	-27	-860	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATGAA	-40	NA	31431059	31465006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.5	chr17	+	2543	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	0	-4	0	4	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATGATTCTATTCAAA	NA	False	NA	NA	False	NA	NA	NA	31431086	31461068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.7	chr17	+	4492	12	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	2012	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.9717895208237	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCATGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	31431086	31463076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31431334_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14867.8	chr17	+	2622	12	NNC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	312	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.0877521445949	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACACTTCGCTCAGGT	NA	False	NA	1	True	CATAAA	-14	NA	31431086	31461376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31431206_31432705_31432893_31434010_31434210_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456910_31458149_31458260_31460214
ES.14867.9	chr17	+	4549	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	0	-2010	0	2010	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGCCATGGTCAT	NA	False	NA	NA	False	NA	NA	NA	31431086	31463074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ES.14868.1	chr17	+	2221	6	NNC	ENSMUSG00000117899.2	novel	755	4	NA	NA	-26	1694	intron_retention	FALSE	canonical	0	0	junction_3	12.8312119458764	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGAGTGTTGTAGTT	NA	False	NA	3	True	AATAAA	-14	NA	31466250	31478646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31466716_31466912_31467013_31475627_31475783_31476562_31477258_31477456_31477709_31478092
ES.14868.2	chr17	+	2004	7	NNC	ENSMUSG00000117899.2	novel	755	4	NA	NA	-26	1700	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	12.2292908852294	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTTGTAGTTGACCTT	NA	False	NA	9	True	AATAAA	-20	NA	31466250	31478652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31466348_31466515_31466728_31466912_31467013_31473008_31473097_31476562_31477258_31477456_31477709_31478092
ES.14868.3	chr17	+	4879	1	NIC	ENSMUSG00000117899.2	novel	755	4	NA	NA	27	-1205	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGGGAGGAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	31466303	31471182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31466300_31471200
ES.14868.4	chr17	+	3719	1	Genic_Genomic	ENSMUSG00000117899.2	novel	NA	NA	NA	NA	4496	-2100	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTATCTTATATGT	89	False	NA	NA	False	NA	NA	NA	31471133	31474852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_31471100_31474900
ES.14868.5	chr17	+	2096	2	Antisense	novelGene_ENSMUSG00000024033.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2694	False	NA	NA	False	NA	NA	NA	31473738	31482658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_31474460_31481283
ES.14868.6	chr17	+	143	1	Intergenic	novelGene_12444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATTTATTTGACAG	3489	False	NA	NA	False	NA	NA	NA	31474533	31474676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31474500_31474700
ES.14868.7	chr17	+	1343	1	Intergenic	novelGene_12445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	7096	False	NA	NA	False	NA	NA	NA	31478140	31479483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31478100_31479500
ES.14869.1	chr17	+	1784	1	Antisense	novelGene_ENSMUSG00000024033.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTATATCCTTTTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	31484740	31486524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_31484700_31486500
ES.1487.1	chr1	-	138	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	136728198	136728060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136728100_136728200
ES.14870.1	chr17	+	1550	2	Antisense	novelGene_ENSMUSG00000024033.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTCACAG	NA	False	NA	NA	False	NA	NA	NA	31486533	31489001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_31487319_31488236
ES.14871.1	chr17	+	2918	21	NNC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	-10017	14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	36.9519620588677	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31495748	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31495904_31500080_31500174_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.10	chr17	+	2012	10	ISM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	7	22191	7	2852	5prime_fragment	FALSE	canonical	3	70	junction_8	23.4999343314029	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAATAACTGTTCACTAG	NA	False	NA	NA	False	NA	NA	NA	31515195	31547510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122
ES.14871.11	chr17	+	3234	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	25	130	25	-98	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCATTTTGTTATTTA	NA	False	NA	NA	False	TTTAAA	-35	NA	31515213	31569571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.12	chr17	+	3243	19	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	33	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	26.6854100795006	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31515221	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515890_31519263_31519482_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.13	chr17	+	3120	19	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	33	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.2625551550152	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515221	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515890_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.14	chr17	+	3309	20	NNC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	41	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.1562872723063	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515229	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540042_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.15	chr17	+	2827	20	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	52	14	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	29.4437818238188	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515240	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515398_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.16	chr17	+	2860	20	NNC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-240	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.8234197088169	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515723	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31515890_31519263_31519482_31526229_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.17	chr17	+	2608	18	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-237	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.6669519807459	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31515726	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515890_31519263_31519482_31526253_31526336_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.18	chr17	+	2747	20	NIC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.9874396605666	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515966	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31516044_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.19	chr17	+	2816	20	NNC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.9874396605666	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31515968	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31516128_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.2	chr17	+	3553	20	NIC	ENSMUSG00000024036.17	novel	2972	20	NA	NA	-110	14	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	25.6401693159089	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31514346	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.20	chr17	+	2737	19	ISM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	3995	31	-129	1	3prime_fragment	FALSE	canonical	3	70	junction_7	17.8364483260791	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31519183	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.21	chr17	+	2962	18	ISM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	4132	31	8	1	intron_retention	FALSE	canonical	3	70	junction_7	18.3429459962153	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31519320	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328
ES.14871.22	chr17	+	2494	19	NNC	ENSMUSG00000024036.17	novel	1288	12	NA	NA	-130	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.2625551550152	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	4196	False	NA	NA	False	AATAAA	-14	NA	31524386	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31524442_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.23	chr17	+	199	1	Intergenic	novelGene_12446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATTTTTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	31541840	31542039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31541800_31542000
ES.14871.24	chr17	+	1925	9	NNC	ENSMUSG00000024036.17	novel	1347	9	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.3764250549735	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31554869	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31555366_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.25	chr17	+	1563	9	FSM	ENSMUSG00000024036.17	ENSMUST00000235220.2	1347	9	16	-232	16	1	multi-exon	FALSE	canonical	0	0	junction_1	38.3764250549735	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31554876	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31555011_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.3	chr17	+	3024	20	FSM	ENSMUSG00000024036.17	ENSMUST00000171233.9	2972	20	-95	43	-95	1	multi-exon	FALSE	canonical	2	5	junction_1	29.0842695772492	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31514361	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31514729_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.4	chr17	+	3452	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	-80	17	-69	15	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACATATAATACAAATGA	NA	False	NA	NA	False	AATAAA	-28	NA	31515108	31569684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.5	chr17	+	2670	19	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	31.4134613749513	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31515134	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515230_31519263_31519482_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.6	chr17	+	2850	21	NNC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.2224750605927	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	31515139	31569669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31538982_31539087_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.7	chr17	+	2733	21	NNC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5555741303566	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	31515170	31569670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31515230_31515380_31515398_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.8	chr17	+	4365	18	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	-4	14	intron_retention	FALSE	canonical	0	0	junction_1	28.0298901261569	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515173	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31515230_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14871.9	chr17	+	3364	20	NNC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	30.072672827162	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCACATATAATACAAATG	NA	False	NA	NA	False	AATAAA	-27	NA	31515188	31569683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547197_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ES.14872.1	chr17	-	1201	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	-13	3	-13	-3	multi-exon	FALSE	canonical	3	52	junction_8	7.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCCTCTGATGTCGC	NA	False	NA	-4	True	AATAAA	-23	NA	31496370	31473995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
ES.14872.2	chr17	-	923	7	NIC	ENSMUSG00000024033.11	novel	1191	9	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	22.0863205526759	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGCCTCTGATGTCGC	NA	False	NA	-4	True	AATAAA	-23	NA	31496319	31473995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31492290_31492397_31492498_31492613_31496175
ES.14873.1	chr17	-	199	1	Antisense	novelGene_ENSMUSG00000024036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGCAAAAAGGCCCCAC	NA	False	NA	NA	False	NA	NA	NA	31526644	31526445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_31526400_31526600
ES.14874.1	chr17	+	1940	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	-5	154	-5	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGTCTGTATTTTTTT	NA	False	NA	NA	False	AATATA	-12	NA	31605178	31695130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ES.14874.10	chr17	+	1644	16	NNC	ENSMUSG00000041119.13	novel	809	8	NA	NA	-2080	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.6563615676286	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGATGCTGTACAGAATT	NA	False	NA	NA	False	TATAAA	-10	NA	31659825	31695068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31659933_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692258_31694898
ES.14874.11	chr17	+	4079	4	NNC	ENSMUSG00000041119.13	novel	1891	19	NA	NA	-1496	0	intron_retention	FALSE	non_canonical	0	0	junction_2	30.3461511379761	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	5666	False	NA	NA	False	AATATA	-15	NA	31687357	31695133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31689784_31690732_31691390_31691489_31692254_31694901
ES.14874.2	chr17	+	1791	18	NIC	ENSMUSG00000041119.13	novel	2089	19	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	19.0193854848534	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGGGTCTGTATTTTT	NA	False	NA	NA	False	AATATA	-10	NA	31605196	31695128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31690732_31690829_31692131_31692254_31694898
ES.14874.3	chr17	+	1945	19	NIC	ENSMUSG00000041119.13	novel	2089	19	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	17.2212365309324	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGGGTCTGTATTTTT	NA	False	NA	NA	False	AATATA	-10	NA	31605199	31695128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690857_31692131_31692254_31694898
ES.14874.4	chr17	+	1855	18	NNC	ENSMUSG00000041119.13	novel	1810	18	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.3600186431435	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGGGTCTGTATTTTT	NA	False	NA	NA	False	AATATA	-10	NA	31605203	31695128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31605331_31633074_31633146_31634282_31634351_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680698_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ES.14874.6	chr17	+	2055	17	NNC	ENSMUSG00000041119.13	novel	2089	19	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_3	19.3342313009853	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGGGTCTGTATTTTT	NA	False	NA	NA	False	AATATA	-10	NA	31605209	31695128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31605331_31633074_31633146_31634253_31634351_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ES.14874.7	chr17	+	1536	14	ISM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	6	9356	-2	-4992	5prime_fragment	FALSE	canonical	3	59	junction_11	7.43014808679585	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGAGATTACGTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	31605233	31685777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328
ES.14874.8	chr17	+	2015	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	73	1	-4	1	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGTGTGCATGTGTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	31605256	31695283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ES.14874.9	chr17	+	190	1	Intergenic	novelGene_12447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAAAAAATCCACAGCT	NA	False	NA	NA	False	NA	NA	NA	31633622	31633812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31633600_31633800
ES.14875.1	chr17	+	799	1	FSM	ENSMUSG00000118049.2	ENSMUST00000235946.2	2144	1	30	1315	30	-1315	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTGTCCTGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	31731007	31731806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31731000_31731800
ES.14876.1	chr17	-	9417	8	ISM	ENSMUSG00000024037.14	ENSMUST00000172284.9	3633	11	2556	-1	858	0	3prime_fragment	FALSE	canonical	3	400	junction_7	22.1608222053318	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	850	False	NA	0	True	ATTAAA	-23	NA	31728701	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483
ES.14876.12	chr17	-	4776	7	ISM	ENSMUSG00000024037.14	ENSMUST00000170176.9	3513	10	7805	2	-884	-2	3prime_fragment	FALSE	canonical	3	443	junction_3	11.5289490703475	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCACGTTGTCTCTGTGT	6114	False	NA	-3	True	ATTAAA	-20	NA	31723437	31713298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744
ES.14876.13	chr17	-	3745	11	NNC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	187.709056787359	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTACCACGTTGTCTCTG	NA	False	NA	-6	True	ATTAAA	-17	NA	31731247	31713301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717405_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728794_31728887_31729551_31729621_31731140
ES.14876.14	chr17	-	2491	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	461	1202	-7	598	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCATTCGCTCAGTCCT	NA	False	NA	NA	False	GATAAA	-45	NA	31731264	31714497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ES.14876.15	chr17	-	1931	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	438	1785	-4	15	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAGCCTCCATAGCTG	NA	False	NA	-2	True	AATAAA	-32	NA	31731287	31715080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ES.14876.16	chr17	-	1866	11	NNC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	188.525435949635	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCAGCAGCAGCCTC	NA	False	NA	-10	True	AATAAA	-24	NA	31731289	31715088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718789_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728794_31728887_31729551_31729621_31731140
ES.14876.17	chr17	-	2968	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	14	4	intron_retention	FALSE	canonical	1	8	junction_10	183.724385969854	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATGTTCAGCAGCAGC	NA	False	NA	-13	True	AATAAA	-21	NA	31738925	31715091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31737791
ES.14876.19	chr17	-	1960	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGAATGTTCAGCAGC	NA	False	NA	-16	True	AATAAA	-18	NA	31731269	31715094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
ES.14876.2	chr17	-	3719	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	435	0	-7	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731290	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ES.14876.20	chr17	-	1800	11	NNC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	145.464634877347	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCTGGAATGTTCAGC	NA	False	NA	-19	True	AATAAA	-15	NA	31731263	31715097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722603_31728794_31728887_31729551_31729621_31731140
ES.14876.21	chr17	-	7998	10	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	400	junction_7	41.3828854706453	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCTGGAATGTTCAGC	NA	False	NA	-19	True	AATAAA	-15	NA	31731269	31715097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31728887_31729551_31729621_31731140
ES.14876.23	chr17	-	1873	11	NNC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	143.243882940948	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCTGGAATGTTCAGC	NA	False	NA	-19	True	AATAAA	-15	NA	31731257	31715097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717973_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ES.14876.24	chr17	-	1832	11	NNC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	189.690168432631	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCTGGAATGTTCAGC	NA	False	NA	-19	True	AATAAA	-15	NA	31731233	31715097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721821_31722483_31722702_31728794_31728887_31729551_31729621_31731140
ES.14876.25	chr17	-	1824	10	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	142.907722968182	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTCTGGAATGTTCAG	NA	False	NA	-20	True	AATAAA	-14	NA	31731267	31715098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31731140
ES.14876.26	chr17	-	3394	11	NNC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	190.814176622179	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTTCTGGAATGTTCA	NA	False	NA	-21	True	AATAAA	-13	NA	31731267	31715099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717405_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31724077_31728742_31728887_31729551_31729621_31731140
ES.14876.3	chr17	-	3691	11	NNC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	191.046826720571	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731238	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721821_31722483_31722702_31728742_31728887_31729551_31729621_31731140
ES.14876.4	chr17	-	3774	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731284	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
ES.14876.5	chr17	-	4460	4	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	20	0	intron_retention	FALSE	canonical	3	448	junction_2	6.0184900284226	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	9304	False	NA	0	True	ATTAAA	-23	NA	31720247	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31719687_31720188
ES.14876.6	chr17	-	3686	11	NIC	ENSMUSG00000024037.14	novel	4154	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	140.848713164161	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731248	31713295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728794_31728887_31729551_31729621_31731140
ES.14876.7	chr17	-	5196	6	NIC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_3	201.844494599184	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTTGTCTCTGTGTCT	NA	False	NA	-1	True	ATTAAA	-22	NA	31731293	31713296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31715903_31717471_31719687_31720188_31720250_31728794_31728887_31729551_31729621_31731140
ES.14876.8	chr17	-	3681	11	NNC	ENSMUSG00000024037.14	novel	3633	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	188.14026682239	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTTGTCTCTGTGTCT	NA	False	NA	-1	True	ATTAAA	-22	NA	31731251	31713296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718789_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728794_31728887_31729551_31729621_31731140
ES.14876.9	chr17	-	3640	11	FSM	ENSMUSG00000024037.14	ENSMUST00000172284.9	3633	11	-7	0	-7	0	multi-exon	FALSE	canonical	3	14	junction_8	141.425033144772	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTTGTCTCTGTGTCT	NA	False	NA	-1	True	ATTAAA	-22	NA	31731264	31713296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728794_31728887_31729551_31729621_31731140
ES.14877.1	chr17	+	2099	4	NIC	ENSMUSG00000024038.18	novel	1582	4	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	1724.13688551692	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCACTATGTGGTTAT	NA	False	NA	23	True	AATAAA	-13	NA	31739074	31750297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31739236_31740542_31740667_31745775_31747376_31750083
ES.14877.10	chr17	+	2104	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	-10	2158	-10	4	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTTGTCTTTCGATTC	NA	False	NA	NA	False	GATAAA	-20	NA	31783697	31824509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.11	chr17	+	1623	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	26	2603	1	-44	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAGCTTCAAGACGTCT	NA	False	NA	NA	False	NA	NA	NA	31783733	31824064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.12	chr17	+	4464	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	16	junction_8	56.8415224786067	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783736	31826667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.13	chr17	+	4488	13	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	6	-16	intron_retention	FALSE	canonical	0	0	junction_2	63.7814737121124	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCCTTGTGGACGAT	NA	False	NA	13	True	ATTAAA	-6	NA	31783738	31826651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31784712_31784873_31800777_31800901_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.14	chr17	+	4479	12	FSM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	-97	-2212	6	11	multi-exon	FALSE	canonical	3	29	junction_2	48.0870422916989	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGCTTGTGCCACCAAA	NA	False	NA	40	True	ATTAAA	-33	NA	31783738	31826678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.16	chr17	+	4305	12	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	11	-40	intron_retention	FALSE	canonical	0	0	junction_1	61.3919799860826	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAATTAAAA	NA	False	NA	-11	True	TTTAAA	-29	NA	31783743	31826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31800889_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.17	chr17	+	498	3	FSM	ENSMUSG00000006705.14	ENSMUST00000176895.2	1855	3	14	1343	14	268	multi-exon	FALSE	canonical	3	129	junction_1	18	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGGTAACCTTTCAGG	NA	False	NA	NA	False	NA	NA	NA	31783746	31807707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31802669_31802778_31807433
ES.14877.18	chr17	+	4181	11	NIC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	-21	-13	intron_retention	FALSE	canonical	3	16	junction_7	43.5413596480404	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGTGGACGATTGA	NA	False	NA	16	True	ATTAAA	-9	NA	31783759	31826654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.19	chr17	+	4594	11	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-20	1	intron_retention	FALSE	canonical	3	26	junction_6	57.9124338980844	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGCAGTTGCAATT	NA	False	NA	NA	False	NA	NA	NA	31783760	31824197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.2	chr17	+	489	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	3	1	0	-1	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTGGTTATTTCCCCT	NA	False	NA	30	True	AATAAA	-20	NA	31739091	31750304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31739236_31740542_31740667_31750083
ES.14877.21	chr17	+	3608	11	NIC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	-20	-585	intron_retention	FALSE	canonical	3	16	junction_7	43.5413596480404	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	31783760	31826082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.22	chr17	+	4320	12	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	5	junction_2	52.5492291818187	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATTGATTCTGTAAAGCT	NA	False	NA	28	True	ATTAAA	-21	NA	31783761	31826666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31800777_31800901_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.23	chr17	+	4528	13	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-18	-12	intron_retention	FALSE	canonical	0	0	junction_3	61.8908088670864	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGTGGACGATTGAT	NA	False	NA	17	True	ATTAAA	-10	NA	31783762	31826655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31800777_31801025_31802669_31802778_31805194_31805291_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.25	chr17	+	2274	12	FSM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	-67	-37	-12	-2	multi-exon	FALSE	canonical	3	29	junction_2	48.0870422916989	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCACATGCTTGTCTTT	NA	False	NA	NA	False	GATAAA	-14	NA	31783768	31824503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.26	chr17	+	2426	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	61	1765	-12	397	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCTAAACTGTCTTTC	NA	False	NA	NA	False	TATAAA	-41	NA	31783768	31824902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.27	chr17	+	4165	11	NIC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	2	junction_3	44.0068176536318	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGATTGATTCTGTAAAGC	NA	False	NA	27	True	ATTAAA	-20	NA	31783769	31826665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31802669_31802778_31807433_31807562_31809599_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.28	chr17	+	4409	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-10	-19	intron_retention	FALSE	canonical	1	2	junction_2	53.1436537498533	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAACATGCCTTGTGGAC	NA	False	NA	10	True	ATTAAA	-3	NA	31783770	31826648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31800777_31801017_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.3	chr17	+	1904	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	21	-1432	-14	1432	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	31739109	31751737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31739236_31740542_31740667_31750083
ES.14877.31	chr17	+	4111	11	NNC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_3	44.0068176536318	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATTGATTCTGTAAAGCT	NA	False	NA	28	True	ATTAAA	-21	NA	31783785	31826666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31802669_31802778_31807433_31807500_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.32	chr17	+	4182	13	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-2	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.0277714560256	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAATTAAAA	NA	False	NA	-11	True	TTTAAA	-29	NA	31783787	31826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31800889_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726_31823953_31824037
ES.14877.33	chr17	+	4147	11	NNC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	0	-40	intron_retention	FALSE	canonical	0	0	junction_2	46.452664078608	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAATTAAAA	NA	False	NA	-11	True	TTTAAA	-29	NA	31783789	31826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31802669_31802778_31807416_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.36	chr17	+	4297	12	NNC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	23	-13	intron_retention	FALSE	canonical	0	0	junction_1	53.8428997291163	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGTGGACGATTGA	NA	False	NA	16	True	ATTAAA	-9	NA	31783812	31826654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31783863_31800861_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.37	chr17	+	4043	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	45.8695599382163	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGATTGATTCTGTAAAGC	NA	False	NA	27	True	ATTAAA	-20	NA	31783829	31826665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726_31823953_31824037
ES.14877.38	chr17	+	3565	1	FSM	ENSMUSG00000118239.2	ENSMUST00000236000.2	1692	1	-1880	7	-1880	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTTAAGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	31784256	31787821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31784300_31787800
ES.14877.39	chr17	+	4643	12	NNC	ENSMUSG00000006705.14	novel	1778	10	NA	NA	-2880	-40	intron_retention	FALSE	canonical	0	0	junction_1	61.3919799860826	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAATTAAAA	NA	False	NA	-11	True	TTTAAA	-29	NA	31799637	31826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31799983_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.4	chr17	+	1553	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	21	8	-11	-3	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCACTATGTGGTTAT	NA	False	NA	23	True	AATAAA	-13	NA	31739112	31750297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
ES.14877.40	chr17	+	4419	12	NNC	ENSMUSG00000006705.14	novel	1778	10	NA	NA	-2539	-10	intron_retention	FALSE	canonical	0	0	junction_1	59.9852598974004	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTGGACGATTGATTC	NA	False	NA	19	True	ATTAAA	-12	NA	31799978	31826657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31800067_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.41	chr17	+	2431	10	NNC	ENSMUSG00000006705.14	novel	745	4	NA	NA	2328	397	intron_retention	FALSE	canonical	0	0	junction_1	48.9272576710557	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCTAAACTGTCTTTC	NA	False	NA	NA	False	TATAAA	-41	NA	31804845	31824902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31805053_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.42	chr17	+	4174	10	NNC	ENSMUSG00000006705.14	novel	745	4	NA	NA	2347	-3	intron_retention	FALSE	canonical	0	0	junction_1	48.9272576710557	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGATTGATTCTGTAAAG	NA	False	NA	26	True	ATTAAA	-19	NA	31804864	31826664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31805053_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.43	chr17	+	4399	10	NNC	ENSMUSG00000006705.14	novel	745	4	NA	NA	2350	-13	intron_retention	FALSE	canonical	0	0	junction_1	48.9272576710557	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGTGGACGATTGA	NA	False	NA	16	True	ATTAAA	-9	NA	31804867	31826654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31805291_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.45	chr17	+	2081	1	NIC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	-470	11	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAGGAGTTTTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31806980	31809061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_31807000_31809100
ES.14877.46	chr17	+	3929	8	NNC	ENSMUSG00000006705.14	novel	745	4	NA	NA	-637	-15	intron_retention	FALSE	canonical	0	0	junction_1	49.0929979628418	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCCTTGTGGACGATT	1595	False	NA	14	True	ATTAAA	-7	NA	31810059	31826652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31810315_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.47	chr17	+	4790	8	NNC	ENSMUSG00000006705.14	novel	745	4	NA	NA	-1524	-40	intron_retention	TRUE	non_canonical	0	0	junction_1	63.0280145034325	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAATTAAAA	3806	False	NA	-11	True	TTTAAA	-29	NA	31812270	31826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31812463_31812991_31813258_31813344_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14877.48	chr17	+	5204	2	FSM	ENSMUSG00000006705.14	ENSMUST00000176513.2	523	2	-583	-4098	-583	-11	multi-exon	FALSE	canonical	3	133	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTGGACGATTGATT	776	False	NA	18	True	ATTAAA	-11	NA	31821128	31826656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31821837_31822160
ES.14877.5	chr17	+	2039	4	NNC	ENSMUSG00000024038.18	novel	2021	3	NA	NA	-1	42119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1743.49081506678	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	31739122	31792424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_31739236_31740542_31740667_31746587_31748234_31792268
ES.14877.6	chr17	+	2327	3	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	47	1916	15	17	5prime_fragment	FALSE	canonical	3	82	junction_2	1809.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAGCAGGAATT	NA	False	NA	NA	False	NA	NA	NA	31739138	31748389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31739236_31740542_31740667_31746283
ES.14877.7	chr17	+	4223	3	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	59	8	-8	-3	intron_retention	FALSE	canonical	3	82	junction_2	1809.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCACTATGTGGTTAT	NA	False	NA	23	True	AATAAA	-13	NA	31739150	31750297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_31739236_31740542_31740667_31746283
ES.14877.8	chr17	+	163	1	Intergenic	novelGene_12450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAATAAATAATATCT	NA	False	NA	NA	False	NA	NA	NA	31781542	31781705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31781500_31781700
ES.14877.9	chr17	+	4267	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	-14	-1	-14	1	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTCTGTAAAGCTTG	NA	False	NA	30	True	ATTAAA	-23	NA	31783693	31826668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ES.14878.1	chr17	-	1624	4	Intergenic	novelGene_12449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50.2062413118794	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATTTCGTTGAGTC	NA	False	NA	NA	False	AATAAA	-17	NA	31778541	31745532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31746725_31749045_31749127_31750145_31750273_31778317
ES.14878.2	chr17	-	2711	4	Intergenic	novelGene_12448	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATTTCGTTGAGTC	NA	False	NA	NA	False	AATAAA	-17	NA	31778534	31745532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31746725_31749045_31750273_31776941_31777017_31778317
ES.14878.3	chr17	-	2688	1	FSM	ENSMUSG00000117818.2	ENSMUST00000235158.2	2711	1	24	-1	24	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCTGTTCTGTCTGCTG	NA	False	NA	-1	True	NA	NA	NA	31771207	31768519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31768500_31771200
ES.14878.4	chr17	-	723	2	Genic_Genomic	ENSMUSG00000117818.2	novel	2711	1	NA	NA	-7303	1	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCTGTTCTGTCTGCTG	NA	False	NA	-1	True	NA	NA	NA	31778534	31768519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_31769026_31778317
ES.14879.1	chr17	-	211	1	FSM	ENSMUSG00000118071.2	ENSMUST00000235397.2	2911	1	1402	1298	1402	-1298	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCTTTCCTTAGGAGGA	7381	False	NA	NA	False	AAGAAA	-1	NA	31783264	31783053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31783100_31783300
ES.1488.1	chr1	+	176	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGAGAGATGC	NA	False	NA	NA	False	NA	NA	NA	136763147	136763323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136763100_136763300
ES.14880.1	chr17	-	1795	2	Antisense	novelGene_ENSMUSG00000006705.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCCCCGTGCTGGGTG	9823	False	NA	NA	False	NA	NA	NA	31809485	31805323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_31806944_31809310
ES.14880.2	chr17	-	8705	7	Antisense	novelGene_ENSMUSG00000006705.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCCCCGTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	31825863	31805323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_31809746_31811072_31811247_31814195_31814297_31815767_31815866_31818486_31818617_31821758_31821834_31822158
ES.14880.3	chr17	-	7306	8	Antisense	novelGene_ENSMUSG00000006705.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCCCCGTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	31825863	31805323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_31809746_31811072_31811247_31814195_31814297_31815767_31815865_31818491_31818617_31821758_31821834_31822158_31822332_31823724
ES.14881.1	chr17	+	154	1	Intergenic	novelGene_12451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31853567	31853721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31853600_31853700
ES.14882.1	chr17	-	5809	16	ISM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	4344	1	309	-1	3prime_fragment	FALSE	canonical	3	120	junction_2	64.4768347720499	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	6255	False	NA	NA	False	NA	NA	NA	31851829	31827868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801
ES.14882.11	chr17	-	4137	16	NNC	ENSMUSG00000024039.16	novel	2533	17	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_11	107.613423367575	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTGTCGACCTTATT	1958	False	NA	-17	True	NA	NA	NA	31856126	31831614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844139_31844462_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ES.14882.13	chr17	-	2063	15	NIC	ENSMUSG00000024039.16	novel	2474	16	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	79.0989112131263	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1957	False	NA	-18	True	NA	NA	NA	31856127	31831615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31856056
ES.14882.14	chr17	-	2443	16	NNC	ENSMUSG00000024039.16	novel	2403	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.9451004742466	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCGTGTCGACCTTAT	1946	False	NA	-18	True	NA	NA	NA	31856138	31831615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31840030_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.15	chr17	-	4110	16	NIC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	7	1	intron_retention	FALSE	canonical	3	120	junction_2	64.4768347720499	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTCGTGTCGACCTT	1952	False	NA	-20	True	NA	NA	NA	31856132	31831617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.18	chr17	-	2515	18	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	107.210364628319	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1952	False	NA	-21	True	NA	NA	NA	31856132	31831618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31836973_31837055_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.19	chr17	-	2118	16	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.672036342705	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1945	False	NA	-21	True	NA	NA	NA	31856139	31831618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840407_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31856056
ES.14882.2	chr17	-	5289	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	12	-2898	12	-849	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTCATTGGAAG	1957	False	NA	NA	False	NA	NA	NA	31856127	31828716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.20	chr17	-	2364	16	NNC	ENSMUSG00000024039.16	novel	2403	16	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.3203350696122	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1970	False	NA	-21	True	NA	NA	NA	31856114	31831618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31834447_31834533_31835029_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.21	chr17	-	2851	17	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	91.6266200402481	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1966	False	NA	-21	True	NA	NA	NA	31856118	31831618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31855625
ES.14882.22	chr17	-	2431	17	NNC	ENSMUSG00000024039.16	novel	2533	17	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.751902317405	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1957	False	NA	-21	True	NA	NA	NA	31856127	31831618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844986_31846438_31846557_31851801_31852126_31856056
ES.14882.23	chr17	-	2421	17	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.027764152999	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGTCGTGTCGACC	1956	False	NA	-22	True	NA	NA	NA	31856128	31831619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844984_31846449_31846557_31851801_31852129_31856056
ES.14882.24	chr17	-	2784	17	NIC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	81	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	91.6266200402481	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGTCGTGTCGACC	2026	False	NA	-22	True	NA	NA	NA	31856058	31831619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31855631
ES.14882.25	chr17	-	5006	15	NIC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	12	-1	intron_retention	FALSE	canonical	3	125	junction_1	50.6577149270736	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGTCGTGTCGACC	1957	False	NA	-22	True	NA	NA	NA	31856127	31831619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31833502_31834533_31835019_31835129_31836100_31836236_31836361_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.26	chr17	-	2441	17	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	91.6266200402481	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGTCGTGTCGACC	1966	False	NA	-22	True	NA	NA	NA	31856118	31831619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852151_31856056
ES.14882.27	chr17	-	6025	13	NIC	ENSMUSG00000024039.16	novel	2403	16	NA	NA	12	-1	intron_retention	FALSE	canonical	3	251	junction_10	24.0258830338357	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGTCGTGTCGACC	1957	False	NA	-22	True	NA	NA	NA	31856127	31831619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.3	chr17	-	4560	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	-6	-2151	-6	-1596	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACCTGTGTAAGTATA	1939	False	NA	NA	False	NA	NA	NA	31856145	31829463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.30	chr17	-	4106	15	NIC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	223	junction_1	30.2853773566164	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGGTCGTGTCGAC	1911	False	NA	-23	True	NA	NA	NA	31856173	31831620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.31	chr17	-	3088	15	NIC	ENSMUSG00000024039.16	novel	2403	16	NA	NA	7	-1	intron_retention	FALSE	canonical	3	223	junction_1	30.1463268145252	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACCTGTGGTCGTGTCG	1952	False	NA	-25	True	NA	NA	NA	31856132	31831622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.33	chr17	-	2132	10	ISM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	1	7395	1	911	5prime_fragment	FALSE	canonical	3	251	junction_7	26.574841903993	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGGAGCATGACCACT	1946	False	NA	NA	False	NA	NA	NA	31856138	31839009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.34	chr17	-	4406	2	NNC	ENSMUSG00000024039.16	novel	230	3	NA	NA	2167	901	intron_retention	FALSE	non_canonical	0	0	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATAACTTGGAG	5766	False	NA	NA	False	NA	NA	NA	31844298	31839019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31841863_31842735
ES.14882.4	chr17	-	4918	15	NNC	ENSMUSG00000024039.16	novel	2403	16	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	81.0701699084169	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGGTGTGAGTGT	1959	False	NA	0	True	NA	NA	NA	31856125	31831597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31838218_31839902_31839988_31840411_31840538_31841400_31841863_31842735_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.5	chr17	-	2447	17	NNC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.0396966128172	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTTGGTGTGAGTG	1951	False	NA	-1	True	NA	NA	NA	31856133	31831598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31832268_31833510_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.6	chr17	-	4583	15	NIC	ENSMUSG00000024039.16	novel	2474	16	NA	NA	0	2	intron_retention	FALSE	canonical	3	42	junction_14	70.4217977038128	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGTCGACCTTATTTCC	1945	False	NA	-14	True	NA	NA	NA	31856139	31831611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ES.14882.7	chr17	-	2483	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	-2	3745	-2	1	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTGTCGACCTTATTTC	1909	False	NA	-15	True	NA	NA	NA	31856175	31831612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.8	chr17	-	2418	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	-13	-2	-13	1	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGTGTCGACCTTATTTC	1932	False	NA	-15	True	NA	NA	NA	31856152	31831612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14882.9	chr17	-	3706	16	NIC	ENSMUSG00000024039.16	novel	6226	17	NA	NA	9	0	intron_retention	FALSE	canonical	3	120	junction_1	50.1063757309276	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGTGTCGACCTTATTT	1920	False	NA	-16	True	NA	NA	NA	31856164	31831613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ES.14883.1	chr17	-	230	1	Intergenic	novelGene_12452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCAGCTCCGAGGTTC	9145	False	NA	NA	False	NA	NA	NA	31861887	31861657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31861700_31861900
ES.14884.1	chr17	+	2960	1	Antisense	novelGene_ENSMUSG00000061613.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGCAACACACAAACCTG	NA	False	NA	NA	False	NA	NA	NA	31870975	31873935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_31871000_31873900
ES.14885.1	chr17	+	1863	3	FSM	ENSMUSG00000024041.11	ENSMUST00000228716.3	1254	3	-620	11	-620	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGTCTGATGTCATG	NA	False	NA	NA	False	AATAAA	-18	NA	31896160	31900696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_31897164_31898532_31898656_31899959
ES.14886.1	chr17	+	1277	6	Intergenic	novelGene_12459	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5.53534100123922	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	31943944	31950713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31944165_31945955_31946064_31947635_31947787_31948635_31948677_31949717_31949795_31950033
ES.14886.2	chr17	+	2932	1	Intergenic	novelGene_12460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31945596	31948528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31945600_31948500
ES.14887.1	chr17	-	673	2	Genic_Genomic	ENSMUSG00000118161.2	novel	882	1	NA	NA	-10641	63	multi-exon	FALSE	non_canonical	0	0	junction_1	0	963	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACAAAGAGT	NA	False	NA	NA	False	AATAAA	-40	NA	31874394	31862808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_31863344_31874256
ES.14887.10	chr17	-	3309	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1007	junction_5	2001.17973538944	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877720	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31874041_31877626
ES.14887.11	chr17	-	7253	5	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	5958	junction_1	300.820025098064	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877707	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867740_31867818_31874041_31877626
ES.14887.12	chr17	-	733	6	FSM	ENSMUSG00000061613.14	ENSMUST00000236475.2	532	6	6	-207	3	0	multi-exon	FALSE	canonical	3	82	junction_5	2542.17667364013	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877709	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31877626
ES.14887.13	chr17	-	894	8	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	2121.99412374881	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877727	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867168_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.14	chr17	-	855	8	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	2136.77164461355	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877686	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867650_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.16	chr17	-	4469	7	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-10	0	intron_retention	FALSE	canonical	2	157	junction_4	2662.65674030031	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877687	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867736_31867818_31871543_31873952_31874041_31877626
ES.14887.17	chr17	-	983	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	-8	0	1	0	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877737	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
ES.14887.2	chr17	-	971	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	83	-8	-40	8	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGTAACGTCTTTGC	NA	False	NA	-9	True	AATAAA	-27	NA	31877783	31866046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.20	chr17	-	914	8	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2197.85226333086	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877714	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870708_31873952_31874041_31877626
ES.14887.21	chr17	-	860	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_6	2337.08556040781	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877769	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31877626
ES.14887.22	chr17	-	840	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_5	2338.47820886433	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877728	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31873952_31874041_31877626
ES.14887.24	chr17	-	2066	9	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2655.6816421354	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877718	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31872645_31873952_31874041_31877626
ES.14887.25	chr17	-	850	8	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2197.85226333086	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877687	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873968_31874041_31877626
ES.14887.27	chr17	-	1410	10	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	2927.59104612194	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877708	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31874515_31874972_31877626
ES.14887.28	chr17	-	6395	3	ISM	ENSMUSG00000061613.14	ENSMUST00000236260.2	539	7	2585	-1230	2585	0	intron_retention	FALSE	canonical	3	6434	junction_2	60	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31872879	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31867291_31867640_31867740_31867818
ES.14887.29	chr17	-	4448	7	ISM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	182	2	-7	-1	intron_retention	FALSE	canonical	3	4626	junction_6	761.685776565522	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877684	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952
ES.14887.3	chr17	-	4268	2	ISM	ENSMUSG00000061613.14	ENSMUST00000236293.2	861	5	-2677	-214	-2677	6	intron_retention	FALSE	canonical	3	5958	junction_1	0	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTTGTAACGTCTTT	69	False	NA	-11	True	AATAAA	-25	NA	31870963	31866048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31866330_31866976
ES.14887.31	chr17	-	1376	9	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	2636.81512138697	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877742	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31874515_31874972_31877626
ES.14887.32	chr17	-	875	8	NNC	ENSMUSG00000061613.14	novel	923	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	2738.56586183204	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877709	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867168_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ES.14887.33	chr17	-	881	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2186.81678076904	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877709	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866324_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.34	chr17	-	3499	3	ISM	ENSMUSG00000061613.14	ENSMUST00000236293.2	861	5	-2003	-206	-2003	-1	intron_retention	FALSE	canonical	3	5958	junction_1	363.5	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	743	False	NA	-19	True	AATAAA	-17	NA	31870289	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_31866330_31866976_31867070_31867156
ES.14887.36	chr17	-	793	7	NIC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2252.07931698686	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877708	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.37	chr17	-	6999	5	NIC	ENSMUSG00000061613.14	novel	722	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	5958	junction_1	320.72992922395	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGACTTCTTGTA	NA	False	NA	-19	True	AATAAA	-17	NA	31877725	31866056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31874041_31877626
ES.14887.40	chr17	-	857	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2183.4475173964	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGTGTGACTTCTTG	NA	False	NA	-21	True	AATAAA	-15	NA	31877687	31866058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877632
ES.14887.41	chr17	-	892	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2123.9980110679	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGTGTGACTTCTTG	NA	False	NA	-21	True	AATAAA	-15	NA	31877723	31866058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867063_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ES.14887.42	chr17	-	7355	4	NIC	ENSMUSG00000061613.14	novel	722	8	NA	NA	4	-3	intron_retention	FALSE	canonical	3	5958	junction_1	212.423057965833	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGTGTGACTTCTTG	NA	False	NA	-21	True	AATAAA	-15	NA	31877725	31866058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867740_31867818_31874041_31877626
ES.14887.45	chr17	-	7020	5	NIC	ENSMUSG00000061613.14	novel	722	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	5958	junction_1	258.278919000371	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGTGTGACTTCTTG	NA	False	NA	-21	True	AATAAA	-15	NA	31877740	31866058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867291_31867640_31867740_31867818_31874041_31877626
ES.14887.46	chr17	-	3366	8	NNC	ENSMUSG00000061613.14	novel	975	9	NA	NA	6	-3	intron_retention	FALSE	canonical	2	5	junction_3	2728.773126427	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGGTGTGACTTCTTG	NA	False	NA	-21	True	AATAAA	-15	NA	31877723	31866058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867650_31867740_31867818_31867869_31870619_31870687_31871475_31874041_31877626
ES.14887.47	chr17	-	4235	6	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	5175	junction_4	534.588963597267	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATTGGTGTGACTTCT	NA	False	NA	-23	True	AATAAA	-13	NA	31877716	31866060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867869_31870619_31874041_31877626
ES.14887.48	chr17	-	1822	8	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	2178.14947670199	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATTGGTGTGACTTCT	NA	False	NA	-23	True	AATAAA	-13	NA	31877717	31866060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874972_31877626
ES.14887.5	chr17	-	1933	6	NNC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	3553	0	intron_retention	FALSE	canonical	2	5	junction_3	2477.23980268362	925	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31871911	31866054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867650_31867740_31867818_31867869_31870619
ES.14887.50	chr17	-	881	8	NNC	ENSMUSG00000061613.14	novel	923	8	NA	NA	-3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2828.39093219203	946	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATACAGTATTGGTGTGA	NA	False	NA	-28	True	AATAAA	-8	NA	31877718	31866065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_31866324_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ES.14887.51	chr17	-	171	2	FSM	ENSMUSG00000061613.14	ENSMUST00000235969.2	703	2	-31	563	4	-563	multi-exon	FALSE	canonical	3	6014	junction_1	0	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTGCTGGGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	31877708	31873951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31874041_31877626
ES.14887.52	chr17	-	176	2	Intergenic	novelGene_12454	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	31988936	31874217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31874252_31988794
ES.14887.53	chr17	-	178	1	Intergenic	novelGene_12453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	859	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	31874395	31874217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31874200_31874400
ES.14887.54	chr17	-	1749	2	Genic_Genomic	ENSMUSG00000061613.14	novel	923	8	NA	NA	-13	-2147	multi-exon	TRUE	non_canonical	0	0	junction_1	0	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATTATTTATGTGGTT	NA	False	NA	NA	False	NA	NA	NA	31877690	31875535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_31875611_31876016
ES.14887.55	chr17	-	176	1	Intergenic	novelGene_12455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTCTAAAAAAAAAAAA	2065	False	NA	NA	False	NA	NA	NA	31903795	31903619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31903600_31903800
ES.14887.56	chr17	-	570	1	Intergenic	novelGene_12456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	31914464	31913894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31913900_31914500
ES.14887.57	chr17	-	182	1	Intergenic	novelGene_12457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACACACTCT	NA	False	NA	NA	False	NA	NA	NA	31914466	31914284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31914300_31914500
ES.14887.58	chr17	-	178	1	Intergenic	novelGene_12458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGAGAAAGATTGT	NA	False	NA	NA	False	NA	NA	NA	31916394	31916216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_31916200_31916400
ES.14887.6	chr17	-	6985	6	NIC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	-45	0	intron_retention	FALSE	canonical	3	5958	junction_1	291.634017220214	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877788	31866054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31874041_31877626
ES.14887.7	chr17	-	4184	7	NIC	ENSMUSG00000061613.14	novel	1046	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5175	junction_5	505.802223096033	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877738	31866054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31874041_31877626
ES.14887.9	chr17	-	950	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	-28	1	-28	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877771	31866055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ES.14888.1	chr17	+	172	1	Intergenic	novelGene_12461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	31992965	31993137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_31993000_31993100
ES.14889.1	chr17	+	150	1	Intergenic	novelGene_12462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTGGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	32002797	32002947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32002800_32002900
ES.1489.1	chr1	-	6066	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AAAACA	-45	NA	136768010	136761944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136761900_136768000
ES.14890.1	chr17	+	4745	2	Intergenic	novelGene_12463	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTCATCTGTCTTTT	6907	False	NA	NA	False	NA	NA	NA	32014023	32021647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32017868_32020746
ES.14891.1	chr17	-	3209	2	Antisense	novelGene_ENSMUSG00000117355.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGTCAGTATCCTTAG	9247	False	NA	NA	False	NA	NA	NA	32025287	32010940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_32013883_32025020
ES.14892.1	chr17	+	177	1	Intergenic	novelGene_12464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	32026491	32026668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32026500_32026700
ES.14893.1	chr17	+	886	2	Intergenic	novelGene_12465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGAAGTCTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	32028296	32029444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32028451_32028712
ES.14893.2	chr17	+	862	1	Intergenic	novelGene_12466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAGTCTTTTTTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	32028583	32029445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32028600_32029400
ES.14894.1	chr17	+	4834	1	Intergenic	novelGene_12467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTTCAAAGGCTTGG	6398	False	NA	NA	False	AATAAA	-17	NA	32042824	32047658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32042800_32047700
ES.14895.1	chr17	+	6223	1	Intergenic	novelGene_12468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACACCTTTCCCTCCAAT	2113	False	NA	NA	False	NA	NA	NA	32053948	32060171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32053900_32060200
ES.14895.2	chr17	+	4025	1	Antisense	novelGene_ENSMUSG00000024042.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAAAACAAAACCCCAA	7658	False	NA	NA	False	NA	NA	NA	32059493	32063518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32059500_32063500
ES.14895.3	chr17	+	3089	1	Antisense	novelGene_ENSMUSG00000024042.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGAAAACAAAACAAAACCAT	8447	False	NA	NA	False	AATGAA	-37	NA	32060282	32063371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32060300_32063400
ES.14896.1	chr17	-	3252	1	Intergenic	novelGene_12469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAATTTCATTTCTGA	NA	False	NA	NA	False	NA	NA	NA	32061910	32058658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32058700_32061900
ES.14896.2	chr17	-	3955	1	Intergenic	novelGene_12470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTTTGTCATATGGCTA	NA	False	NA	NA	False	AGTAAA	-25	NA	32062918	32058963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32059000_32062900
ES.14897.1	chr17	-	4553	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-30	-2	-30	2	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGAGAGCCCATTCCT	NA	False	NA	-2	True	AATAAA	-36	NA	32074808	32063221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.10	chr17	-	3252	13	NIC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	11	-1076	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	54.8413747902885	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTCTATTTT	NA	False	NA	-22	True	TATAAA	-15	NA	32074756	32064299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32074645
ES.14897.11	chr17	-	2973	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-18	1566	-18	1216	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAACTCGCTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	32074796	32064789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.14	chr17	-	2801	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-58	1778	-58	1004	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAATAATAATTGAGA	NA	False	NA	58	True	NA	NA	NA	32074836	32065001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.15	chr17	-	2679	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-39	1881	-39	901	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTGGTGTATGGGCTT	NA	False	NA	-45	True	NA	NA	NA	32074817	32065104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.16	chr17	-	3607	1	Genic_Genomic	ENSMUSG00000024042.8	novel	NA	NA	NA	NA	-28	-691	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAACCCTGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	32074806	32071199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_32071200_32074800
ES.14897.17	chr17	-	3027	2	ISM	ENSMUSG00000024042.8	ENSMUST00000234331.2	2554	12	-49	5215	-38	-712	intron_retention	FALSE	canonical	3	192	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32074816	32071220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32073299_32073867
ES.14897.2	chr17	-	4280	13	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	836	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	53.7501937981002	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTCACCTGTGAGAG	NA	False	NA	-11	True	AATAAA	-27	NA	32073931	32063230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070202_32070371_32070506_32070571_32073181_32073299_32073867
ES.14897.3	chr17	-	4486	14	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	68.6960546828861	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGGTTCACCTGTGAG	NA	False	NA	-13	True	AATAAA	-25	NA	32074769	32063232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069107_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074643
ES.14897.4	chr17	-	4331	15	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	14	-21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.2451092738595	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTGACTTACCCTTGG	NA	False	NA	-25	True	AATAAA	-13	NA	32074753	32063244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32063352_32063495_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.5	chr17	-	3590	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	-75	1006	-75	-1006	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTGTCCCCATGTTTG	NA	False	NA	1	True	NA	NA	NA	32074853	32064229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14897.6	chr17	-	3419	14	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	74	-1007	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.4171849193712	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGTTGTCCCCATGTTT	NA	False	NA	0	True	NA	NA	NA	32074693	32064230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32065618_32066006_32066236_32066874_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073871_32074039_32074645
ES.14897.7	chr17	-	3153	12	NIC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	5	-1075	combination_of_known_splicesites	FALSE	canonical	2	10	junction_11	53.7187349007666	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTTTTTCTATTTTG	NA	False	NA	-21	True	TATAAA	-16	NA	32074773	32064298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32074645
ES.14897.8	chr17	-	2578	9	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	-39	-1075	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	61.3310687987744	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTTTTTCTATTTTG	NA	False	NA	-21	True	TATAAA	-16	NA	32074817	32064298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068529_32073269_32073299_32073867_32074039_32074645
ES.14897.9	chr17	-	3504	14	NNC	ENSMUSG00000024042.8	novel	4521	14	NA	NA	-39	-1076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.4873611160161	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTCTATTTT	NA	False	NA	-22	True	TATAAA	-15	NA	32074817	32064299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069679_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ES.14898.1	chr17	+	8016	8	Intergenic	novelGene_12472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACACAAAAACGCGGGA	NA	False	NA	NA	False	NA	NA	NA	32158622	32253511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32165786_32206321_32206426_32226649_32226768_32230149_32230282_32232290_32232441_32241738_32241844_32252234_32252386_32253418
ES.14898.10	chr17	+	4777	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	236.976975115081	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32255381	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.11	chr17	+	5118	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	184.583042038764	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	False	NA	21	True	ATTAAA	-23	NA	32255381	32281838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.12	chr17	+	4756	16	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	174.368753571912	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	False	NA	21	True	ATTAAA	-23	NA	32255381	32281838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.14	chr17	+	2493	16	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-1	29	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	174.368753571912	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255382	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.15	chr17	+	4640	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-1	73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCATCTGTCGTTTTT	NA	False	NA	95	True	TATAAA	-42	NA	32255382	32281912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272940_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.16	chr17	+	2292	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	34	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	276.623777513276	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255383	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266650_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271718_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.19	chr17	+	5481	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	236.976975115081	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGATTCCTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	32255383	32282543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.2	chr17	+	2102	1	Intergenic	novelGene_12473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATTGTGTTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	32179143	32181245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32179100_32181200
ES.14898.20	chr17	+	2329	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	239.127762367095	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255383	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271679_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.22	chr17	+	2243	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	240.689124053975	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255383	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.23	chr17	+	3332	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	36	intron_retention	FALSE	non_canonical	0	0	junction_9	188.049691280078	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTTTAATTACTTTACA	NA	False	NA	19	True	TATAAA	-19	NA	32255383	32279583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.24	chr17	+	6215	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	3	intron_retention	FALSE	non_canonical	0	0	junction_9	187.381741799363	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGATTGGTCTTTGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	32255383	32281833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.26	chr17	+	5159	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_10	188.051390433006	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255383	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32278312_32279321
ES.14898.29	chr17	+	2261	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	239.515763615692	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTGGGCTTTTTAATT	NA	False	NA	11	True	TATAAA	-11	NA	32255383	32279575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275563_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.3	chr17	+	185	2	Intergenic	novelGene_12474	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGAAATGTTTAG	NA	False	NA	NA	False	AATAAA	-7	NA	32181014	32331826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32181055_32331681
ES.14898.30	chr17	+	4560	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTGGTCTTTGATGTT	NA	False	NA	17	True	ATTAAA	-19	NA	32255383	32281834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274863_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.31	chr17	+	4835	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	32	intron_retention	FALSE	non_canonical	0	0	junction_5	251.531682895018	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCTTTTTAATTACTT	NA	False	NA	15	True	TATAAA	-15	NA	32255383	32279579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270603_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.32	chr17	+	5351	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGGGGGATTTA	NA	False	NA	NA	False	AATAAA	-3	NA	32255383	32282631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.33	chr17	+	3091	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	37	intron_retention	FALSE	non_canonical	0	0	junction_9	187.170175391842	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTTAATTACTTTACAA	NA	False	NA	20	True	TATAAA	-20	NA	32255383	32279584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.34	chr17	+	3547	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-1003	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAATGCCATTCCCGGAAG	NA	False	NA	NA	False	NA	NA	NA	32255383	32280827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.35	chr17	+	3124	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	36	intron_retention	FALSE	non_canonical	0	0	junction_9	186.83255167894	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTTTAATTACTTTACA	NA	False	NA	19	True	TATAAA	-19	NA	32255383	32279583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.36	chr17	+	5377	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	186.83255167894	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255383	32281836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.38	chr17	+	7037	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	193.580445523015	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255385	32281836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.39	chr17	+	3796	8	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	295.881112362823	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTGGTCTTTGATGTT	NA	False	NA	17	True	ATTAAA	-19	NA	32255385	32281834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264958_32272901_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.4	chr17	+	6780	7	Intergenic	novelGene_12475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGCACACACAAAAACGCGG	NA	False	NA	NA	False	NA	NA	NA	32200392	32253509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32206426_32226649_32226768_32230149_32230282_32232290_32232441_32241738_32241844_32252234_32252386_32253418
ES.14898.40	chr17	+	2516	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	236.976975115081	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255386	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.42	chr17	+	4607	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	237.62781737801	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGATTGGTCTTTGAT	NA	False	NA	14	True	ATTAAA	-16	NA	32255387	32281831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272940_32274884_32275036_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.43	chr17	+	3957	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	6	34	intron_retention	FALSE	non_canonical	0	0	junction_9	187.381741799363	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255389	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.44	chr17	+	4491	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	240.689124053975	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	False	NA	21	True	ATTAAA	-23	NA	32255392	32281838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.45	chr17	+	4769	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-4	29	intron_retention	FALSE	non_canonical	0	0	junction_8	193.580445523015	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255393	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.46	chr17	+	8587	12	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	7	junction_7	196.392127562678	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32255393	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32271802_32272830_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.47	chr17	+	4753	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	277.33859067492	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255393	32281836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277508_32277639_32278247_32278312_32279321
ES.14898.48	chr17	+	4542	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.227236431199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255393	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272946_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.5	chr17	+	5425	1	Antisense	novelGene_ENSMUSG00000002076.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTATGTAGTTCT	3833	False	NA	NA	False	NA	NA	NA	32205086	32210511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32205100_32210500
ES.14898.50	chr17	+	4536	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	181.227236431199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGATTGGTCTTTGAT	NA	False	NA	14	True	ATTAAA	-16	NA	32255394	32281831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272940_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.51	chr17	+	6182	14	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	7	junction_10	183.436685947711	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32255401	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272929_32274078_32274290_32274884_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.52	chr17	+	5577	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	243.417653111178	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32255402	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.53	chr17	+	6851	12	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	4	intron_retention	FALSE	non_canonical	0	0	junction_5	259.666251144563	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTGGTCTTTGATGTT	NA	False	NA	17	True	ATTAAA	-19	NA	32255402	32281834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.55	chr17	+	4524	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.117371590275	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCGGATTGGTCTTTG	NA	False	NA	12	True	ATTAAA	-14	NA	32255402	32281829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271718_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.56	chr17	+	4468	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	282.10340544018	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32255402	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272842_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.57	chr17	+	4304	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	284.804855217666	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255404	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.58	chr17	+	4694	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	244.625181226179	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATTGGTCTTTGATGTTG	NA	False	NA	18	True	ATTAAA	-20	NA	32255404	32281835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.59	chr17	+	2545	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	273.955269699121	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255405	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270603_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.6	chr17	+	4894	16	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-347	49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.489330699043	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCATGTCAGGGTCTGG	NA	False	NA	71	True	TATAAA	-18	NA	32254726	32281888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32254814_32255184_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.60	chr17	+	4589	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.503810474793	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGATTGGTCTTTGAT	NA	False	NA	14	True	ATTAAA	-16	NA	32255405	32281831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264982_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32275036_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.61	chr17	+	7457	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_9	195.009597342171	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255405	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32277639_32278247_32278312_32279321
ES.14898.62	chr17	+	4570	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	239.127762367095	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	False	NA	22	True	ATTAAA	-24	NA	32255405	32281839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271679_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.63	chr17	+	5551	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	-3	intron_retention	FALSE	canonical	2	7	junction_10	179.158520618485	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255405	32281836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32264986_32266647_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.64	chr17	+	3984	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	29	intron_retention	FALSE	non_canonical	0	0	junction_8	193.551511231507	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255405	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.66	chr17	+	5418	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_9	187.356856602518	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGATTGGTCTTTGAT	NA	False	NA	14	True	ATTAAA	-16	NA	32255405	32281831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.69	chr17	+	7723	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	6	706	intron_retention	FALSE	non_canonical	0	0	junction_8	193.580445523015	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGATTCCTGAGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	32255408	32282545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.7	chr17	+	2703	16	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-347	44	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	232.489330699043	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTTTACAAATACCCA	NA	False	NA	27	True	TATAAA	-27	NA	32254726	32279591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32254814_32255078_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.70	chr17	+	4439	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	240.302785192824	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	False	NA	21	True	ATTAAA	-23	NA	32255410	32281838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277589_32277639_32278247_32278312_32279321
ES.14898.71	chr17	+	3157	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	9	29	intron_retention	FALSE	non_canonical	0	0	junction_9	187.356856602518	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255411	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.73	chr17	+	3715	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	10	34	intron_retention	FALSE	canonical	2	7	junction_10	235.628858978847	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255412	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.74	chr17	+	4199	16	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	10	4645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	232.489330699043	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTGTTTTATGTTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	32255412	32286484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321_32280667_32285642
ES.14898.75	chr17	+	2317	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	12	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	237.660837054378	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTGGGCTTTTTAATT	NA	False	NA	11	True	TATAAA	-11	NA	32255414	32279575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270603_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.76	chr17	+	5770	12	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	19	29	intron_retention	FALSE	non_canonical	0	0	junction_7	202.187499920166	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255421	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.77	chr17	+	4453	14	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	240.689124053975	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGATTGGTCTTTGATGTT	NA	False	NA	17	True	ATTAAA	-19	NA	32255422	32281834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272940_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.78	chr17	+	3445	12	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	22	29	intron_retention	FALSE	canonical	0	0	junction_7	302.7564277525	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255424	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32255579_32264902_32264986_32266647_32266706_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32274078_32274290_32274884_32274972_32275529_32277639_32278247_32278312_32279321
ES.14898.79	chr17	+	4542	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	239.515763615692	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	False	NA	21	True	ATTAAA	-23	NA	32255429	32281838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32275002_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.8	chr17	+	4680	16	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	269.021634817722	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTTGATGTTGC	NA	False	NA	19	True	ATTAAA	-21	NA	32255354	32281836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32265108_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.80	chr17	+	3929	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	27	32	intron_retention	FALSE	non_canonical	0	0	junction_8	193.929039141182	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCTTTTTAATTACTT	NA	False	NA	15	True	TATAAA	-15	NA	32255429	32279579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.82	chr17	+	4461	15	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	276.668039501553	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32255433	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32264986_32266657_32266706_32267555_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.83	chr17	+	4941	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	32	34	intron_retention	FALSE	non_canonical	0	0	junction_8	195.027490939668	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTTTTTAATTACTTTA	NA	False	NA	17	True	TATAAA	-17	NA	32255434	32279581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.84	chr17	+	2540	12	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	-2295	29	intron_retention	FALSE	non_canonical	0	0	junction_8	255.110444401979	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32264963	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.85	chr17	+	3677	13	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-1236	28	intron_retention	FALSE	canonical	1	3	junction_8	189.100282037512	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTGGGCTTTTTAATT	NA	False	NA	11	True	TATAAA	-11	NA	32266022	32279575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274308_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.86	chr17	+	5127	11	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-3	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	267.997462674556	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32267573	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32271802_32272830_32272933_32274873_32275036_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.87	chr17	+	2930	11	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	202	29	intron_retention	FALSE	canonical	0	0	junction_2	295.10127075294	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32267982	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32269053_32270119_32270185_32270603_32270824_32271712_32271802_32272901_32272929_32274078_32274290_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.88	chr17	+	4193	11	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	554	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	205.476616674501	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32268334	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.89	chr17	+	5080	9	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-50	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	228.033851653653	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGATTGGTCTTTGATGTTG	NA	False	NA	18	True	ATTAAA	-20	NA	32268942	32281835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32269053_32270119_32270185_32270656_32270824_32271712_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.9	chr17	+	4849	13	NNC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	1	29	intron_retention	FALSE	non_canonical	0	0	junction_8	252.870671270689	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32255377	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32275036_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.90	chr17	+	1683	9	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-659	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	219.12093550138	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32270118	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32270185_32270656_32270824_32271712_32271802_32272830_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.91	chr17	+	3242	6	NNC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	172	29	intron_retention	FALSE	non_canonical	0	0	junction_1	253.811426062737	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGCTTTTTAATTA	NA	False	NA	12	True	TATAAA	-12	NA	32270949	32279576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32272933_32274873_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.92	chr17	+	3354	7	NIC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	193	36	intron_retention	FALSE	canonical	3	488	junction_3	75.103077315262	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTTTAATTACTTTACA	NA	False	NA	19	True	TATAAA	-19	NA	32270970	32279583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32271802_32272830_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ES.14898.93	chr17	+	6498	4	NIC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-1506	-2	intron_retention	FALSE	canonical	3	488	junction_2	59.5669557911282	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32273386	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32274099_32274884_32274972_32275529_32277639_32278247
ES.14898.94	chr17	+	5686	3	FSM	ENSMUSG00000058392.14	ENSMUST00000150187.2	666	3	-2737	-2283	-367	0	multi-exon	FALSE	canonical	3	622	junction_1	43.5	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32274525	32281830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32277639_32278247_32278312_32279321
ES.14898.95	chr17	+	4909	4	NIC	ENSMUSG00000058392.14	novel	4487	13	NA	NA	-141	-2	intron_retention	FALSE	canonical	3	488	junction_1	90.9004339312464	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCTTTGATGTTGCC	NA	False	NA	20	True	ATTAAA	-22	NA	32274751	32281837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32274972_32275529_32277639_32278247_32278312_32279321
ES.14898.96	chr17	+	177	1	Intergenic	novelGene_12476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGGGTTTATTCCA	6746	False	NA	NA	False	NA	NA	NA	32291536	32291713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32291500_32291700
ES.14898.97	chr17	+	185	2	Antisense	novelGene_ENSMUSG00000002791.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGAAATGTTTAG	6746	False	NA	NA	False	AATAAA	-7	NA	32291536	32331826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32291556_32331660
ES.14898.98	chr17	+	2254	2	Antisense	novelGene_ENSMUSG00000002791.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32301605	32307526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32303069_32306735
ES.14898.99	chr17	+	209	1	Intergenic	novelGene_12477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAAATGTTTAGCA	NA	False	NA	NA	False	AATAAA	-9	NA	32331619	32331828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32331600_32331800
ES.14899.1	chr17	-	4827	8	NNC	ENSMUSG00000002076.13	novel	387	4	NA	NA	1	70764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	432.129562959621	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGTACATTATATGC	NA	False	NA	NA	False	AATAAA	-17	NA	32253481	32092978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32096983_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.10	chr17	-	2091	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-10	786	-10	527	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCGCTTGGGTCTGTGG	NA	False	NA	NA	False	AATGAA	-18	NA	32253492	32164528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.11	chr17	-	1967	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	37	-525	8	525	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCCGCTTGGGTCTGT	NA	False	NA	NA	False	AATGAA	-16	NA	32253474	32164530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.12	chr17	-	2453	9	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-6	175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	409.889848007974	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGTGCCTGTGCATGT	NA	False	NA	-4	True	ATTAAA	-30	NA	32255329	32164880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32254799
ES.14899.13	chr17	-	1612	7	NIC	ENSMUSG00000002076.13	novel	2867	8	NA	NA	11	173	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	432.972542111185	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCATGTGCCTGTGCAT	NA	False	NA	-6	True	ATTAAA	-28	NA	32253471	32164882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32252234_32252386_32253418
ES.14899.14	chr17	-	1891	8	NNC	ENSMUSG00000002076.13	novel	2867	8	NA	NA	8	173	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCATGTGCCTGTGCAT	NA	False	NA	-6	True	ATTAAA	-28	NA	32253474	32164882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.15	chr17	-	1469	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-8	161	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCTGCCTGCACTCAT	NA	False	NA	-18	True	ATTAAA	-16	NA	32253490	32164894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ES.14899.16	chr17	-	1561	7	NIC	ENSMUSG00000002076.13	novel	2867	8	NA	NA	4	161	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCTGCCTGCACTCAT	NA	False	NA	-18	True	ATTAAA	-16	NA	32253478	32164894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ES.14899.17	chr17	-	1864	9	FSM	ENSMUSG00000002076.13	ENSMUST00000238192.2	3115	9	-44	1295	-44	18	multi-exon	FALSE	canonical	1	2	junction_8	409.307036343134	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTTTGTACATTAACT	NA	False	NA	5	True	AATATA	-20	NA	32255367	32165037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32255269
ES.14899.18	chr17	-	1476	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	1	2	1	-2	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253510	32165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.19	chr17	-	1326	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	514.177634675022	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253510	32165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ES.14899.2	chr17	-	4889	1	Intergenic	novelGene_12471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCCTCTCTTCATGTT	9315	False	NA	NA	False	NA	NA	NA	32157573	32152684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32152700_32157600
ES.14899.21	chr17	-	1414	7	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253494	32165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
ES.14899.22	chr17	-	1730	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253488	32165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.23	chr17	-	1626	7	NNC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_6	475.574973643016	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGGGTTTAGGAAGTG	NA	False	NA	-15	True	AATAAA	-28	NA	32253488	32165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.24	chr17	-	1553	8	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-14	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	406.321627908388	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATCTTGGGTTTAGGAA	NA	False	NA	-18	True	AATAAA	-25	NA	32255337	32165060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32255269
ES.14899.25	chr17	-	2836	7	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	190	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	489.532912297245	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATCTTGGGTTTAGG	NA	False	NA	-20	True	AATAAA	-23	NA	32255133	32165062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253676
ES.14899.27	chr17	-	1182	5	NIC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	7	6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	478.068182898632	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAATCTTGGGTTTAGG	NA	False	NA	-20	True	AATAAA	-23	NA	32253504	32165062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32252234_32252386_32253418
ES.14899.28	chr17	-	1435	7	NNC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	517.745567071532	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAATATAATCTTGGG	NA	False	NA	-26	True	AATAAA	-17	NA	32253487	32165068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32226649_32226768_32230156_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.29	chr17	-	1534	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-5	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	429.554063975131	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACATTCTCAATATAAT	NA	False	NA	-32	True	AATAAA	-11	NA	32253487	32165074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232436_32241739_32241844_32252234_32252386_32253418
ES.14899.3	chr17	-	13100	9	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	8	10394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	474.829163357728	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAGGGATGGAGAGGC	NA	False	NA	NA	False	AATAAA	-13	NA	32253474	32153348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32159128_32159452_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.30	chr17	-	1333	6	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	522.128949590041	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACATTCTCAATATAAT	NA	False	NA	-32	True	AATAAA	-11	NA	32253488	32165074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32252234_32252386_32253418
ES.14899.31	chr17	-	1282	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-8	1593	-8	-267	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAACTCTCAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	32253490	32165335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.4	chr17	-	5408	7	NNC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	32	2505	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_6	475.574973643016	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGTGGTGGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	32253450	32161237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.5	chr17	-	4495	8	NNC	ENSMUSG00000002076.13	novel	3115	9	NA	NA	-5	1451	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	393.49786712074	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCATATGTTCAGGTGC	NA	False	NA	NA	False	TATAAA	-20	NA	32253487	32162291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253246
ES.14899.6	chr17	-	3862	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	2	-2385	2	1072	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGTCTCCTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	32253509	32162670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.7	chr17	-	3947	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-8	-1072	-8	1072	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGTCTCCTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	32253490	32162670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.8	chr17	-	2969	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-28	-74	1	74	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAGTTTTTAAAACACT	NA	False	NA	NA	False	AGTAAA	-18	NA	32253510	32163668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.14899.9	chr17	-	2821	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	35	-1377	6	64	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGTACTTTCGAGTTT	NA	False	NA	NA	False	AGTAAA	-8	NA	32253476	32163678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ES.149.1	chr1	-	3670	1	Genic_Genomic	ENSMUSG00000025939.20	novel	NA	NA	NA	NA	41387	448	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTTGTCCAGTTTGAT	5206	False	NA	NA	False	AATAAA	-14	NA	16614235	16610565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_16610600_16614200
ES.149.10	chr1	-	2367	7	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-6	358	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	192.825842551136	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGGACACTGTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	16689489	16639647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16656309_16656362_16668174_16668278_16672485_16672578_16689460
ES.149.11	chr1	-	2336	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	201	-356	-4	356	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGTGGACACTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	16689512	16639649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.12	chr1	-	2209	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	165	-193	-12	193	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTGTGTAGATGACAT	NA	False	NA	NA	False	TTTAAA	-11	NA	16689548	16639812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.13	chr1	-	2049	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-4	148	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCAACTGATAATTGGT	NA	False	NA	NA	False	CATAAA	-5	NA	16689512	16639857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.15	chr1	-	1917	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTGTTTCTATGACAA	NA	False	NA	NA	False	TATAAA	-19	NA	16689530	16640007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.16	chr1	-	1611	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-4	-290	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCTCACTTACCCAT	NA	False	NA	NA	False	TATAAA	-14	NA	16689512	16640295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.17	chr1	-	1710	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	165	306	-12	-306	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATGTTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	16689548	16640311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.18	chr1	-	1643	7	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	10	-306	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	194.934746916899	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATGTTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	16689498	16640311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672211_16672274_16672485_16672578_16689460
ES.149.19	chr1	-	4671	1	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	10595	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	787	False	NA	NA	False	AATACA	-32	NA	16645027	16640356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16640400_16645000
ES.149.2	chr1	-	1563	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGTCTGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	16689512	16611013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.20	chr1	-	6755	3	ISM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	28685	351	-5406	-351	3prime_fragment	FALSE	canonical	3	429	junction_2	17.5	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16661028	16640356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16641507_16652150_16652227_16655499
ES.149.21	chr1	-	3332	4	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-2716	-351	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	210.966558698029	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGACATTTTTATTT	NA	False	NA	NA	False	AATACA	-32	NA	16658338	16640356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16656309
ES.149.22	chr1	-	1505	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	10	-358	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689498	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
ES.149.23	chr1	-	1572	6	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-9	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.489529739879	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689492	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689411
ES.149.25	chr1	-	1624	7	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.920175592943	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689508	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655577_16659448_16659534_16668174_16668278_16672485_16672578_16689460
ES.149.26	chr1	-	1632	6	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	11	-358	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	173.798043717414	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689497	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655474_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.28	chr1	-	1709	7	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-2639	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	205.792303602983	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16692352	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689868_16689974_16692239
ES.149.29	chr1	-	2305	7	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	8	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	203.286879939546	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689528	16640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16670597_16671265_16672485_16672578_16689460
ES.149.3	chr1	-	3620	6	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	-6	0	intron_retention	FALSE	canonical	2	9	junction_1	175.985226652694	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGTCTGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	16689489	16611013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16614257_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.30	chr1	-	1588	7	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-455	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	201.185997414223	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCTTGTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	16689513	16640460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672211_16672274_16672485_16672578_16689460
ES.149.31	chr1	-	1317	1	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	13528	-772	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTCTGAAGTGAAGG	3720	False	NA	NA	False	AATAAA	-21	NA	16642094	16640777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16640800_16642100
ES.149.32	chr1	-	1206	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	201	774	-4	-774	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGTCTCTGAAGTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	16689512	16640779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.33	chr1	-	1079	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-7	-776	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCAGTCTCTGAAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	16689490	16640781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
ES.149.35	chr1	-	1101	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-5	-776	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCAGTCTCTGAAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	16689488	16640781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.36	chr1	-	178	1	ISM	ENSMUSG00000025939.20	ENSMUST00000136455.9	1517	4	34949	0	1063	0	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAGAAAGGAAGAAAA	2482	False	NA	NA	False	NA	NA	NA	16654559	16654381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16654400_16654600
ES.149.4	chr1	-	1606	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16631567	16629961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16630000_16631600
ES.149.5	chr1	-	5932	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	223	-3974	-7	-1470	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACTTGAATACTAACTG	NA	False	NA	NA	False	AATAAA	-27	NA	16689490	16636031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.6	chr1	-	5855	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	11	-1475	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATACTTGAATACT	NA	False	NA	NA	False	AATAAA	-22	NA	16689497	16636036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.7	chr1	-	3015	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-12	1106	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTGTGTTCATCCC	NA	False	NA	NA	False	AAGAAA	-9	NA	16689520	16638899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
ES.149.8	chr1	-	3074	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	213	-1106	8	1106	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCTGTGTTCATCCC	NA	False	NA	NA	False	AAGAAA	-9	NA	16689500	16638899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ES.149.9	chr1	-	2067	3	NNC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	-4	358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGGACACTGTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	16689487	16639647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16641507_16655474_16655656_16689460
ES.1490.1	chr1	+	5094	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCGGGCATGAATCACT	NA	False	NA	NA	False	TTTAAA	-40	NA	136838138	136843232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136838100_136843200
ES.14900.1	chr17	+	5300	2	NNC	ENSMUSG00000097305.3	novel	1029	2	NA	NA	0	-13995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCGTCTGCCACCCTC	NA	False	NA	NA	False	NA	NA	NA	32332384	32338067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32334156_32334538
ES.14900.2	chr17	+	1744	1	Intergenic	novelGene_12478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	1738	False	NA	NA	False	NA	NA	NA	32337312	32339056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32337300_32339100
ES.14901.1	chr17	+	5167	12	Genic_Genomic	ENSMUSG00000097305.3	novel	1029	2	NA	NA	8294	4388	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAGCAGCCATGCTGA	5440	False	NA	NA	False	NA	NA	NA	32341014	32365205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_32341827_32343248_32343356_32351176_32351324_32352361_32352670_32354361_32354519_32356786_32356871_32358096_32358330_32358620_32358776_32360191_32360524_32362217_32363260_32363339_32363604_32363679
ES.14901.2	chr17	+	173	1	Intergenic	novelGene_12479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32353853	32354026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32353900_32354000
ES.14902.1	chr17	-	7991	33	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-61	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	22.9713646470992	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTTTCTGTGCAAGG	5978	False	NA	0	True	AATAAA	-20	NA	32385887	32339792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363596_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370343_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.10	chr17	-	8072	33	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	19.1859476163545	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCTGGTTTCTGTGCA	6017	False	NA	-3	True	AATAAA	-17	NA	32385848	32339795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352703_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.11	chr17	-	8021	33	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-38	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	22.0606408565119	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTCTGGTTTCTGTGC	6001	False	NA	-4	True	AATAAA	-16	NA	32385864	32339796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356717_32356757_32358088_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.12	chr17	-	7644	1	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	5299	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTCTGGTTTCTGTGC	3144	False	NA	-4	True	AATAAA	-16	NA	32347440	32339796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32339800_32347400
ES.14902.13	chr17	-	1732	3	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-8758	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTGTCTGGTTTCTGT	3865	False	NA	-6	True	AATAAA	-14	NA	32365557	32339798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341230_32363684_32363809_32365380
ES.14902.14	chr17	-	7824	33	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-38	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.9137789921953	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTGTCTGGTTTCTGT	6001	False	NA	-6	True	AATAAA	-14	NA	32385864	32339798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362559_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.16	chr17	-	4938	14	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-8766	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.8436776959233	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAAGTGTCTGGTTTCT	3857	False	NA	-8	True	AATAAA	-12	NA	32365565	32339800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352703_32354358_32354522_32356590_32356757_32358088_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380
ES.14902.2	chr17	-	8088	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	-72	0	-72	0	multi-exon	FALSE	canonical	3	42	junction_20	15.8899720244404	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGTTTCTGTGCAAG	5967	False	NA	-1	True	AATAAA	-19	NA	32385898	32339793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.20	chr17	-	7424	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	-1	593	-1	-593	multi-exon	FALSE	canonical	3	42	junction_20	15.8899720244404	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCCCGCTGCAAATTC	6038	False	NA	NA	False	AATATA	-17	NA	32385827	32340386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.21	chr17	-	3790	12	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-6652	-593	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	26.7031430966407	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCCCGCTGCAAATTC	5971	False	NA	NA	False	AATATA	-17	NA	32363451	32340386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352703_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340
ES.14902.22	chr17	-	5157	26	ISM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	10508	3119	10508	386	internal_fragment	FALSE	canonical	3	42	junction_19	15.4906939805807	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTTTTTCTTTTT	NA	False	NA	NA	False	ACTAAA	-18	NA	32375318	32342912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225
ES.14902.23	chr17	-	5966	30	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-37	-8779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.6764172484078	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTGGATAGAATTTTT	6002	False	NA	NA	False	NA	NA	NA	32385863	32352077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370343_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.24	chr17	-	7029	28	ISM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	16	15212	16	-11707	5prime_fragment	FALSE	canonical	3	42	junction_15	12.2297395512928	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAATTTGTTTTTTTTTT	6055	False	NA	NA	False	AATAAA	-25	NA	32385810	32355005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.25	chr17	-	10790	1	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	3111	-28627	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATCAGAAATGGACAAAA	9150	False	NA	NA	False	NA	NA	NA	32382715	32371925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32371900_32382700
ES.14902.26	chr17	-	4245	9	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-35	-28679	intron_retention	FALSE	canonical	3	51	junction_4	8.92678553567856	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAGTAAAATAAG	6004	False	NA	NA	False	NA	NA	NA	32385861	32371977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32377099_32377184_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.27	chr17	-	2657	11	NIC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-38	-28679	intron_retention	FALSE	canonical	3	47	junction_6	9.34023554306849	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAGTAAAATAAG	6001	False	NA	NA	False	NA	NA	NA	32385864	32371977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.4	chr17	-	7978	33	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.3777971771174	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGTTTCTGTGCAAG	6069	False	NA	-1	True	AATAAA	-19	NA	32385796	32339793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356797_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ES.14902.6	chr17	-	3005	9	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-1967	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.4125770989901	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGTTTCTGTGCAAG	5693	False	NA	-1	True	AATAAA	-19	NA	32358766	32339793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32340204_32340409_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618
ES.14902.9	chr17	-	4350	12	NNC	ENSMUSG00000038146.9	novel	8016	33	NA	NA	-5930	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.014611385547	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCTGGTTTCTGTGCA	6693	False	NA	-3	True	AATAAA	-17	NA	32362729	32339795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32341835_32343255_32343354_32346112_32346185_32346483_32346701_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217
ES.14903.1	chr17	-	2808	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	0	-1217	0	327	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGGAGTTGTGAGGA	994	False	NA	NA	False	AATAAA	-18	NA	32408523	32402416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
ES.14903.2	chr17	-	2431	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	50	-890	-36	0	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTGTATTCACTGC	1044	False	NA	NA	False	AGTAAA	-35	NA	32408473	32402743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
ES.14903.3	chr17	-	1545	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	46	0	-40	0	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCGGTCTGATGTTTAA	1040	False	NA	NA	False	CATAAA	-26	NA	32408477	32403633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
ES.14904.1	chr17	+	2852	1	Intergenic	novelGene_12480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAACACC	NA	False	NA	NA	False	NA	NA	NA	32411221	32414073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32411200_32414100
ES.14905.1	chr17	+	5000	2	Antisense	novelGene_ENSMUSG00000024002.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGGGCCAGATTTCA	NA	False	NA	NA	False	NA	NA	NA	32419413	32424994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32420567_32421147
ES.14905.2	chr17	+	4416	2	Antisense	novelGene_ENSMUSG00000024002.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGGGCCAGATTTCA	NA	False	NA	NA	False	NA	NA	NA	32420457	32424994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32421521_32421641
ES.14906.1	chr17	+	6522	4	Antisense	novelGene_ENSMUSG00000024002.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGTTAGGAGTAGCCT	NA	False	NA	NA	False	NA	NA	NA	32425383	32434760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32430254_32431814_32432109_32432498_32432703_32433606
ES.14907.1	chr17	+	180	1	Intergenic	novelGene_12481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTTTTTCAGAT	3167	False	NA	NA	False	NA	NA	NA	32455918	32456098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32455900_32456100
ES.14908.1	chr17	+	166	1	Intergenic	novelGene_12482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGAGCCGGGCGT	NA	False	NA	NA	False	NA	NA	NA	32466826	32466992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32466800_32467000
ES.14909.1	chr17	+	374	1	Intergenic	novelGene_12483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGTGGCTTCCCTAC	NA	False	NA	NA	False	AAAACA	-4	NA	32481445	32481819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32481400_32481800
ES.14909.2	chr17	+	178	1	Intergenic	novelGene_12484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTCCACTGG	NA	False	NA	NA	False	NA	NA	NA	32481446	32481624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32481400_32481600
ES.1491.1	chr1	-	4774	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-117	-2901	-117	9	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTATGTTGTCCTTGTG	NA	False	NA	-5	True	AATAAA	-32	NA	136881485	136770299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ES.1491.11	chr1	-	2149	4	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	8708	0	-271	0	3prime_fragment	FALSE	canonical	3	51	junction_2	4.96655480858378	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAATACTGG	NA	False	NA	NA	False	NA	NA	NA	136868592	136772013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146
ES.1491.12	chr1	-	2432	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	27	-703	27	-484	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTCTTCTATATAAGCA	NA	False	NA	39	True	ATTAAA	-16	NA	136881341	136772497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ES.1491.13	chr1	-	2936	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	434	-488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	20.5350310445346	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAACCCTCTTCTATATA	NA	False	NA	35	True	ATTAAA	-12	NA	136880934	136772501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872693_136872816_136876459_136876598_136879839_136879903_136880319
ES.1491.14	chr1	-	2255	8	NNC	ENSMUSG00000026398.15	novel	1859	8	NA	NA	124	496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.8424605856724	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTGCTGAAGTTTGT	NA	False	NA	-19	True	TATAAA	-19	NA	136877176	136772555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136877122
ES.1491.15	chr1	-	2161	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-65	-340	-65	191	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTCAGAAGTTGATC	NA	False	NA	NA	False	AATAAA	-44	NA	136881433	136772860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ES.1491.17	chr1	-	2151	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	824	158	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	15.8646619882051	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCCTTGTATATTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	136880544	136772893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136880319
ES.1491.18	chr1	-	4966	7	ISM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	27	41587	27	3307	5prime_fragment	FALSE	canonical	3	24	junction_6	14.2877181134319	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	136881341	136814787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ES.1491.19	chr1	-	1700	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGTAGGCAATATCTTG	NA	False	NA	NA	False	NA	NA	NA	136852700	136851000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136851000_136852700
ES.1491.2	chr1	-	6001	7	FSM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	-844	-1711	-844	6	multi-exon	FALSE	canonical	3	44	junction_6	7.84042232422605	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTATGTTGTCCTT	NA	False	NA	-8	True	AATAAA	-29	NA	136878144	136770302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459
ES.1491.3	chr1	-	5067	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	491	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	15.8646619882051	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTAAATCCTTTATG	NA	False	NA	-16	True	AATAAA	-21	NA	136880877	136770310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136880319
ES.1491.7	chr1	-	3164	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	-34	-1374	-34	187	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGTTTACATTCTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	136881402	136771826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ES.1491.9	chr1	-	4178	1	NIC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	92309	179	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATATAGTGTTTAC	NA	False	NA	NA	False	AATAAA	-21	NA	136776012	136771834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_136771800_136776000
ES.14910.1	chr17	+	5094	1	Antisense	novelGene_ENSMUSG00000024002.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTACTTGGGATGCA	NA	False	NA	NA	False	NA	NA	NA	32488133	32493227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32488100_32493200
ES.14910.2	chr17	+	3298	1	Antisense	novelGene_ENSMUSG00000024002.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTAGGTAATCTTATT	NA	False	NA	NA	False	NA	NA	NA	32488133	32491431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32488100_32491400
ES.14911.1	chr17	+	2426	2	NNC	ENSMUSG00000097217.3	novel	1207	2	NA	NA	-1088	-12419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	32502674	32505244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32502703_32502846
ES.14911.2	chr17	+	1623	1	Genic_Genomic	ENSMUSG00000097217.3	novel	NA	NA	NA	NA	-8	-12286	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	AATAAA	-7	NA	32503754	32505377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_32503800_32505400
ES.14912.1	chr17	-	7193	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	93	1251	intron_retention	FALSE	canonical	3	87	junction_19	60.2163228715122	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAACCTCCTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	32503558	32413996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.10	chr17	-	6109	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	13	0	intron_retention	FALSE	canonical	3	7	junction_17	88.1411368204427	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503638	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443920_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.11	chr17	-	6249	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-21	0	intron_retention	FALSE	canonical	1	2	junction_19	86.9979741143436	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503672	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219_32461413_32472014_32472175_32503491
ES.14912.12	chr17	-	6122	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_19	72.4641854418109	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503079	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32502832
ES.14912.13	chr17	-	6081	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_19	84.0905395188133	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503643	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219_32461434_32503491
ES.14912.14	chr17	-	5931	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-11	0	intron_retention	FALSE	canonical	3	148	junction_18	43.3756203926174	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503707	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.15	chr17	-	6089	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-9	0	intron_retention	FALSE	canonical	3	87	junction_19	60.2163228715122	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503705	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.16	chr17	-	5805	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	70.5128423893709	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503704	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421497_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.17	chr17	-	5906	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-219	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_19	65.4612866922249	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503326	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.18	chr17	-	5683	18	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-5	0	intron_retention	TRUE	non_canonical	0	0	junction_1	66.8852242127742	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503701	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416639_32417172_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.20	chr17	-	6025	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_20	73.2627292693904	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503081	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32502832
ES.14912.22	chr17	-	5942	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	94.8600353355135	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503566	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443920_32444549_32444688_32448390_32448710_32472010_32472175_32503491
ES.14912.23	chr17	-	5800	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-14	0	intron_retention	FALSE	canonical	3	24	junction_18	63.403956725074	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503121	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.24	chr17	-	7181	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-7	0	intron_retention	FALSE	canonical	3	140	junction_5	49.4760198804418	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503703	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32444688_32448390_32448710_32503491
ES.14912.25	chr17	-	5990	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_20	62.1417733895646	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503705	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.26	chr17	-	5953	20	FSM	ENSMUSG00000024002.19	ENSMUST00000121285.8	5922	20	-31	0	-7	0	multi-exon	FALSE	canonical	3	16	junction_19	70.5239591122355	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503114	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.27	chr17	-	6053	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_7	96.2164284726535	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503674	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421548_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32503491
ES.14912.28	chr17	-	5856	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	71.4790004127086	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503116	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.29	chr17	-	6116	22	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	87.4904853913476	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503703	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.3	chr17	-	7292	23	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	11	1090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	107.919783877036	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGAATTCATAGACTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	32503096	32414157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32461219_32461434_32472014_32472175_32485345_32485495_32503036
ES.14912.31	chr17	-	6407	5	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-2077	0	intron_retention	FALSE	canonical	3	205	junction_4	30.3016088681773	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	3228	False	NA	-4	True	AATAAA	-19	NA	32422059	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32417249_32417330_32417537_32417656_32417788_32417869_32421521_32421641
ES.14912.32	chr17	-	4253	12	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_7	102.755667837484	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503096	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421446_32440931_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.33	chr17	-	6076	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6	junction_17	94.4321978988099	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503109	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.34	chr17	-	6064	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-8	0	intron_retention	FALSE	canonical	2	8	junction_7	78.4595454805106	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503704	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421497_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.35	chr17	-	6063	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	86.5186333855459	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503702	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32500033_32500110_32503491
ES.14912.36	chr17	-	5830	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.1838554325222	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503699	32415247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417650_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.39	chr17	-	5698	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	70.2072645813808	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCTGTCTCCCTGAAA	NA	False	NA	-5	True	AATAAA	-18	NA	32503701	32415248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491_32503558_32503684
ES.14912.4	chr17	-	3710	6	ISM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	82978	-1089	-111	1089	3prime_fragment	FALSE	canonical	3	175	junction_5	52.9127583858562	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGGAATTCATAGACTT	5194	False	NA	NA	False	ATTAAA	-18	NA	32420093	32414158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975
ES.14912.40	chr17	-	5955	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	82.3548875295207	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503704	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32503491
ES.14912.41	chr17	-	6133	18	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	148	junction_17	37.76314821783	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503701	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.42	chr17	-	6328	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-36	-2	intron_retention	FALSE	canonical	1	1	junction_19	87.1219834484959	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503732	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219_32461434_32472014_32472175_32503491
ES.14912.44	chr17	-	6244	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	16	-2	intron_retention	FALSE	canonical	0	0	junction_19	103.52391904318	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503635	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32455457_32455574_32472014_32472175_32503491
ES.14912.45	chr17	-	5727	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	30007	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	68.8792351182191	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32461332	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219
ES.14912.46	chr17	-	6572	15	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_12	78.2694195763347	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503702	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417537_32417656_32417788_32417869_32418245_32419975_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32444549_32444688_32448390_32448710_32503491
ES.14912.47	chr17	-	5624	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	82.4211534582969	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503070	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421497_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.48	chr17	-	5860	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	69.5770761751733	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503078	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32502832
ES.14912.49	chr17	-	6003	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.6855538978051	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503693	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421548_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.5	chr17	-	5944	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-119	4	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	48.2561838501388	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTCCCTGAAATTTCT	NA	False	NA	0	True	AATAAA	-23	NA	32503815	32415243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.52	chr17	-	6044	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	6	junction_17	82.5095310535785	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503694	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32503491
ES.14912.53	chr17	-	6097	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	6	junction_16	83.9159632542515	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503665	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32503491
ES.14912.54	chr17	-	3017	7	NNC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-536	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	114.131016331622	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	4769	False	NA	-6	True	AATAAA	-17	NA	32420518	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418317_32419975
ES.14912.57	chr17	-	5163	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.8202475561805	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503694	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32415902_32416715_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.58	chr17	-	6829	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_8	84.7183046084733	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503706	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32425066_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.6	chr17	-	6238	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-6	3	intron_retention	FALSE	canonical	1	1	junction_20	86.0281785230863	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCCCTGAAATTTC	NA	False	NA	-1	True	AATAAA	-22	NA	32503702	32415244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32485345_32485495_32503491
ES.14912.60	chr17	-	5951	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	78.5991571201626	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503692	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421497_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.61	chr17	-	7624	18	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	148	junction_17	41.1075052711713	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503671	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.62	chr17	-	3146	9	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	11	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	121.814408014816	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503096	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420260_32448568_32448710_32472014_32472175_32503036
ES.14912.63	chr17	-	5990	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_21	85.4659365118927	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503103	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32485345_32485495_32503036
ES.14912.64	chr17	-	3195	9	NNC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.977862180966	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503704	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420388_32448541_32448710_32503491
ES.14912.66	chr17	-	5698	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	70.2072645813807	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503672	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440208_32440304_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.67	chr17	-	4064	14	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	109.69958978957	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503694	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421200_32441044_32441140_32443060_32443197_32443832_32443961_32444549_32444688_32448390_32448710_32503491
ES.14912.68	chr17	-	5017	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.6821186821031	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503093	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32415902_32416715_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.7	chr17	-	3769	11	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-8	2	intron_retention	FALSE	non_canonical	0	0	junction_6	91.2887725845846	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTCCCTGAAATTT	NA	False	NA	-2	True	AATAAA	-21	NA	32503704	32415245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420226_32440931_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.70	chr17	-	6013	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	102.299236492009	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503110	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421497_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219_32461409_32472014_32472175_32503036
ES.14912.71	chr17	-	3284	8	NNC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-1471	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	106.244231536088	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	3834	False	NA	-6	True	AATAAA	-17	NA	32421453	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419990_32420567_32421147
ES.14912.72	chr17	-	6166	19	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	87	junction_18	61.2028856335757	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	False	NA	-6	True	AATAAA	-17	NA	32503702	32415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.73	chr17	-	5724	21	NNC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	95.4518072118072	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	NA	False	NA	-7	True	AATAAA	-16	NA	32503702	32415250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421407_32421442_32421521_32421641_32421695_32430140_32430252_32431879_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.75	chr17	-	3279	10	NNC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-10223	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.2097100556917	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	NA	False	NA	-7	True	AATAAA	-16	NA	32430205	32415250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421317_32421641_32421695_32430140
ES.14912.76	chr17	-	5972	21	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	84.1186513206197	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	NA	False	NA	-7	True	AATAAA	-16	NA	32503701	32415250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32485345_32485495_32503491
ES.14912.77	chr17	-	5588	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.4098417076818	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	NA	False	NA	-7	True	AATAAA	-16	NA	32503094	32415250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32417950_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.78	chr17	-	5926	22	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	93.2055977219824	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTGTCTCCCTGA	NA	False	NA	-7	True	AATAAA	-16	NA	32503102	32415250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32443832_32443920_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.79	chr17	-	2528	6	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-1194	-4	intron_retention	FALSE	canonical	0	0	junction_5	119.145960905102	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCTGCTGTCTCCCTG	4111	False	NA	-8	True	AATAAA	-15	NA	32421176	32415251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32421147
ES.14912.80	chr17	-	7388	18	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	20	junction_15	66.5288656554275	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCTGCTGTCTCCCTG	NA	False	NA	-8	True	AATAAA	-15	NA	32503701	32415251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32444688_32448390_32448710_32503491
ES.14912.81	chr17	-	3569	12	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	-12631	-372	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	51.5880055250209	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCTACCCCTTATT	NA	False	NA	NA	False	TATAAA	-20	NA	32432613	32415619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500
ES.14912.82	chr17	-	5270	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	13	-493	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	48.2561838501388	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32503638	32415740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.83	chr17	-	4499	12	NIC	ENSMUSG00000024002.19	novel	4486	13	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	74.6678595929892	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGAGAGTTTTGTGTGG	NA	False	NA	4	True	AATAAA	-38	NA	32503696	32423868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.84	chr17	-	4484	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	11	-9	-1	9	multi-exon	FALSE	canonical	3	11	junction_1	93.8707740578622	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCTAGAGAGTTTT	NA	False	NA	-2	True	AATAAA	-32	NA	32503072	32423874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ES.14912.85	chr17	-	4741	14	NNC	ENSMUSG00000024002.19	novel	4486	13	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	112.350518704875	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTCTAGAGAGTTTT	NA	False	NA	-2	True	AATAAA	-32	NA	32503115	32423874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32461219_32461434_32472014_32472175_32503036
ES.14912.86	chr17	-	4659	13	NIC	ENSMUSG00000024002.19	novel	4486	13	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	84.1111615661084	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAACCCTTTCTAGAGA	NA	False	NA	-7	True	AATAAA	-27	NA	32503707	32423879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.87	chr17	-	3149	13	NIC	ENSMUSG00000024002.19	novel	4486	13	NA	NA	-8	-1503	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	84.1111615661084	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCCGTAGAGTACTAAAA	NA	False	NA	NA	False	NA	NA	NA	32503704	32425386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
ES.14912.88	chr17	-	1912	9	NIC	ENSMUSG00000024002.19	novel	1910	9	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	82.3813540796702	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGTGGAGGAAAATAA	NA	False	NA	34	True	NA	NA	NA	32503701	32432589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.89	chr17	-	1759	9	FSM	ENSMUSG00000024002.19	ENSMUST00000237692.2	1823	9	-8	72	-8	10	multi-exon	FALSE	canonical	3	24	junction_8	78.3700157904795	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGCACAAAAAGAAAG	NA	False	NA	15	True	NA	NA	NA	32503115	32432608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
ES.14912.9	chr17	-	5849	20	NNC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	71.8413533795241	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTCTCCCTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	32503696	32415246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421548_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ES.14912.90	chr17	-	1787	1	NIC	ENSMUSG00000024002.19	novel	1910	9	NA	NA	2	-9092	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTCACCCACAAAAATG	NA	False	NA	NA	False	NA	NA	NA	32503694	32501907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32501900_32503700
ES.14913.1	chr17	+	150	1	Intergenic	novelGene_12485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	66	False	NA	NA	False	NA	NA	NA	32506553	32506703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32506600_32506700
ES.14914.1	chr17	-	182	1	Intergenic	novelGene_12486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGGAAATAAGCT	NA	False	NA	NA	False	NA	NA	NA	32508332	32508150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32508200_32508300
ES.14915.1	chr17	+	205	1	Intergenic	novelGene_12487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTTAGGTGATGGGT	4373	False	NA	NA	False	NA	NA	NA	32510860	32511065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32510900_32511100
ES.14916.1	chr17	-	138	1	Intergenic	novelGene_12488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9214	False	NA	NA	False	NA	NA	NA	32514859	32514721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32514700_32514900
ES.14917.1	chr17	-	242	1	Intergenic	novelGene_12489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCATTTGATCGTTTT	7616	False	NA	NA	False	AAAAAG	-44	NA	32516457	32516215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32516200_32516500
ES.14918.1	chr17	-	179	1	Intergenic	novelGene_12490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACCACATAACC	4075	False	NA	NA	False	NA	NA	NA	32519998	32519819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_32519800_32520000
ES.14919.1	chr17	+	2745	1	Antisense	novelGene_ENSMUSG00000024045.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGGGTGGCGGGAG	NA	False	NA	NA	False	NA	NA	NA	32535272	32538017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32535300_32538000
ES.1492.1	chr1	-	319	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	136900144	136899825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136899800_136900100
ES.14920.1	chr17	+	191	1	Intergenic	novelGene_12491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCTTCTTCTTCTTC	142	False	NA	NA	False	NA	NA	NA	32538502	32538693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32538500_32538700
ES.14921.1	chr17	+	287	1	Intergenic	novelGene_12492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	8665	False	NA	NA	False	NA	NA	NA	32547025	32547312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32547000_32547300
ES.14921.2	chr17	+	175	1	Intergenic	novelGene_12493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGAGGT	8667	False	NA	NA	False	NA	NA	NA	32547027	32547202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32547000_32547200
ES.14922.1	chr17	-	5461	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	9	2	intron_retention	FALSE	canonical	3	440	junction_9	68.5072481972204	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCATTAATTACTG	NA	False	NA	1	True	AATAAA	-18	NA	32540150	32522643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.10	chr17	-	4540	12	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	426	junction_6	73.0315226856535	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGTGTTCATTAATTA	NA	False	NA	-2	True	AATAAA	-15	NA	32540168	32522646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.100	chr17	-	5410	10	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	-5	intron_retention	FALSE	canonical	3	462	junction_7	64.8664344710549	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540131	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536853_32537744_32537784_32540058
ES.14922.101	chr17	-	4917	11	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	462	junction_7	63.4924404949125	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540137	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.102	chr17	-	3660	11	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	426	junction_6	73.9821600117217	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540118	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536853_32537744_32537784_32540058
ES.14922.103	chr17	-	2680	15	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_14	216.209141474506	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32539666	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539444
ES.14922.105	chr17	-	7831	7	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	462	junction_5	61.7272225197279	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540082	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32530069_32531259_32534463_32534628_32537784_32540058
ES.14922.106	chr17	-	5467	3	NIC	ENSMUSG00000024045.7	novel	1881	10	NA	NA	3451	-5	intron_retention	FALSE	canonical	3	611	junction_2	9	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32531253	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32528524_32529551
ES.14922.107	chr17	-	2468	15	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	222.415863477699	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540117	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536089_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.108	chr17	-	3533	12	NIC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	-164	-5	intron_retention	FALSE	canonical	3	70	junction_11	157.857975711928	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32539863	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.109	chr17	-	4238	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	70	junction_12	150.492524731297	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTTAAGTCCTAAAAC	NA	False	NA	-35	True	AATAAA	-16	NA	32539633	32523976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.11	chr17	-	5871	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	440	junction_8	70.858840003288	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGTGTTCATTAATTA	NA	False	NA	-2	True	AATAAA	-15	NA	32540161	32522646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.110	chr17	-	4515	10	NIC	ENSMUSG00000024045.7	novel	2021	12	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	426	junction_6	71.1593586324923	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTTAAGTCCTAAAAC	NA	False	NA	-35	True	AATAAA	-16	NA	32540082	32523976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32537784_32540058
ES.14922.111	chr17	-	2013	12	FSM	ENSMUSG00000024045.7	ENSMUST00000236954.2	2021	12	2	6	2	-6	multi-exon	FALSE	canonical	3	19	junction_10	162.409186321627	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTTAAGTCCTAAAAC	NA	False	NA	-35	True	AATAAA	-16	NA	32540085	32523976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537744_32537784_32540058
ES.14922.112	chr17	-	2417	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	82	-7	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	146.652106144734	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTTAAGTCCTAAAA	NA	False	NA	-36	True	AATAAA	-15	NA	32539550	32523977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.113	chr17	-	3799	11	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	19	junction_9	168.997070980535	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATTGTTAAGTCCTAA	NA	False	NA	-38	True	AATAAA	-13	NA	32540137	32523979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537744_32537784_32540058
ES.14922.114	chr17	-	2492	3	ISM	ENSMUSG00000002625.11_ENSMUSG00000024045.7	ENSMUST00000235614.2	916	8	2751	-1871	71	1684	intron_retention	FALSE	canonical	3	413	junction_2	1.5	890	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	32551802	32538713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32540760_32540869_32540966_32551452
ES.14922.115	chr17	-	5309	12	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	35	junction_4	135.276148539336	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTTTGTGCTGTGGT	NA	False	NA	1	True	AATAAA	-18	NA	32569551	32540396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.116	chr17	-	3505	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-1	1	intron_retention	FALSE	canonical	3	35	junction_5	130.49218054609	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTTTGTGCTGTGGT	NA	False	NA	1	True	AATAAA	-18	NA	32569582	32540396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.117	chr17	-	4613	13	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	21	junction_6	135.155979848799	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569554	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.118	chr17	-	3762	12	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	27	0	intron_retention	FALSE	canonical	3	272	junction_5	38.7142530398011	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569522	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557798_32564297_32564373_32569460
ES.14922.119	chr17	-	5062	12	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	272	junction_5	39.3633214348099	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.12	chr17	-	4265	12	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_10	206.634503851168	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540112	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537737_32537784_32540058
ES.14922.120	chr17	-	6214	9	NNC	ENSMUSG00000002625.11	novel	4381	12	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	129.825844884599	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569566	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32554598_32554931_32555003_32555080_32557489_32557760_32557798_32564297_32564373_32569460
ES.14922.121	chr17	-	2176	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	-74	0	-74	0	multi-exon	FALSE	canonical	3	272	junction_6	38.0609912279546	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569655	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.122	chr17	-	3650	14	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	27	0	intron_retention	FALSE	canonical	3	25	junction_10	148.095842947143	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569522	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557425_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.123	chr17	-	5119	13	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_5	130.91353698784	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569563	32540397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.124	chr17	-	4608	11	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	339	junction_6	24.7145706011656	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569578	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.125	chr17	-	4476	11	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	356	junction_5	20.3332240434221	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.126	chr17	-	3630	14	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_2	136.949262837432	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569534	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32541001_32542084_32542183_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.127	chr17	-	2831	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	143.565547143215	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569569	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.128	chr17	-	5941	11	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	339	junction_7	23.5340179314965	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569580	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.129	chr17	-	3014	11	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-572	0	intron_retention	FALSE	canonical	2	4	junction_3	163.906711271992	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32556099	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32542084_32542183_32551452_32551584_32551784_32551891_32551976_32553020_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258
ES.14922.13	chr17	-	8023	9	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	462	junction_6	61.3794550317938	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540119	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32534463_32534628_32536853_32537744_32537784_32540058
ES.14922.130	chr17	-	2209	15	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_2	148.196040185056	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569514	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32541001_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.131	chr17	-	3335	15	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	0	intron_retention	FALSE	non_canonical	0	0	junction_9	131.008568032626	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569522	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555445_32555497_32555713_32557244_32557329_32557425_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.133	chr17	-	3529	13	FSM	ENSMUSG00000002625.11	ENSMUST00000236039.2	3513	13	-17	1	3	0	multi-exon	FALSE	canonical	3	272	junction_5	37.9549257526462	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.134	chr17	-	2133	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	35	junction_6	121.469929931449	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569553	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.135	chr17	-	4788	12	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_9	165.713383949018	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569567	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32542084_32542183_32551452_32551891_32551976_32552119_32553561_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557760_32557798_32564297_32564373_32569460
ES.14922.136	chr17	-	2768	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	32	junction_5	97.8895646323209	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.137	chr17	-	6019	12	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	2	4	junction_3	146.594961184306	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569560	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32542084_32542183_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.138	chr17	-	3604	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_5	126.05300847955	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569581	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.139	chr17	-	2427	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	2	21	junction_5	129.58417793696	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.14	chr17	-	4993	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	68	junction_6	151.089446465772	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540132	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.140	chr17	-	4254	11	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_6	118.164123150811	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569522	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.141	chr17	-	5541	12	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	41	junction_5	101.266606637305	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569572	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.143	chr17	-	5162	12	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	113.584933816429	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569547	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553406_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557798_32564297_32564373_32569460
ES.14922.144	chr17	-	3029	15	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.2943969916	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569568	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552843_32553242_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.146	chr17	-	3448	16	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_10	148.672286889282	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569580	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555445_32555497_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.147	chr17	-	3039	15	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_11	164.171823877004	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569556	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553020_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555715_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.148	chr17	-	3631	13	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	99.3843199682704	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569563	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.15	chr17	-	4606	14	FSM	ENSMUSG00000024045.7	ENSMUST00000237381.2	4570	14	-36	0	12	0	multi-exon	FALSE	canonical	3	68	junction_6	145.1715981155	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540147	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.150	chr17	-	1987	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_11	68.7455007804221	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569569	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.151	chr17	-	3948	13	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_5	108.013984434115	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569522	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554134_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.152	chr17	-	2267	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	2	0	intron_retention	FALSE	canonical	2	21	junction_6	156.075708124829	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569547	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.153	chr17	-	1898	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	101.600738477491	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569564	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.154	chr17	-	2672	16	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	158.546228799889	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553406_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.157	chr17	-	2213	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	-2	0	intron_retention	FALSE	canonical	2	21	junction_6	126.228089632399	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569553	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.159	chr17	-	3818	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	2	21	junction_6	160.415468234767	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32540398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.16	chr17	-	3685	13	NNC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.867699264541	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540126	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32537722_32537784_32540058
ES.14922.161	chr17	-	4394	12	FSM	ENSMUSG00000002625.11	ENSMUST00000236105.2	4381	12	-15	2	3	0	multi-exon	FALSE	canonical	3	339	junction_7	23.6967759427869	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTTCGTTTGTGCTGT	NA	False	NA	-2	True	AATAAA	-15	NA	32569566	32540399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.162	chr17	-	3819	12	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	272	junction_5	40.7631741114006	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTTCGTTTGTGCTGT	NA	False	NA	-2	True	AATAAA	-15	NA	32569567	32540399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.163	chr17	-	4263	13	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_10	120.625770003299	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569534	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557760_32557798_32564297_32564373_32569460
ES.14922.164	chr17	-	3240	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	32	junction_5	126.592903883312	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569566	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.167	chr17	-	1780	11	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	143.972914119288	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32555545	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553932_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258
ES.14922.168	chr17	-	1789	2	ISM	ENSMUSG00000002625.11	ENSMUST00000235724.2	545	3	9574	1	9574	-1	3prime_fragment	FALSE	canonical	3	416	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32542299	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32540760_32540869
ES.14922.17	chr17	-	5379	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_6	155.994331323156	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540119	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.170	chr17	-	5096	11	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	27	-1	intron_retention	FALSE	canonical	3	272	junction_5	39.5924235176378	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569522	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.171	chr17	-	3069	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	30	-1	intron_retention	FALSE	canonical	3	32	junction_5	131.860006159904	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569519	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.172	chr17	-	3788	13	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	35	junction_4	129.920141069642	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569566	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.173	chr17	-	3494	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	4	-1	intron_retention	FALSE	canonical	1	3	junction_2	149.973620129321	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569545	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540996_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.174	chr17	-	5122	12	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	25	-1	intron_retention	FALSE	canonical	3	32	junction_5	103.791192161223	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569524	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32554598_32554931_32555003_32555080_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.175	chr17	-	2079	13	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_11	107.69594545138	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569566	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32564269_32564373_32569460
ES.14922.176	chr17	-	3609	11	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	27	-1	intron_retention	FALSE	canonical	1	3	junction_10	115.984481720616	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569522	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32569460
ES.14922.177	chr17	-	3381	14	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	-1	intron_retention	FALSE	canonical	3	144	junction_10	71.06809802023	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569522	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.178	chr17	-	1998	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	126.131148677346	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569522	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.18	chr17	-	6239	11	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	462	junction_7	63.4924404949125	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540131	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.180	chr17	-	6346	9	NIC	ENSMUSG00000002625.11	novel	4381	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	339	junction_5	22.6601936222972	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569575	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32555178_32555258_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.181	chr17	-	3801	11	NIC	ENSMUSG00000002625.11	novel	3513	13	NA	NA	5	-1	intron_retention	FALSE	canonical	3	272	junction_4	39.7698378171197	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTTCGTTTGTGCTG	NA	False	NA	-3	True	AATAAA	-14	NA	32569558	32540400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.182	chr17	-	2182	17	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	164.057047528444	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGGTCTTCGTTTGTGC	NA	False	NA	-5	True	AATAAA	-12	NA	32569563	32540402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557425_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.183	chr17	-	2142	17	NNC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	166.013930138407	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGGTCTTCGTTTGTGC	NA	False	NA	-5	True	AATAAA	-12	NA	32569567	32540402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32540760_32540869_32540966_32542084_32542183_32551452_32551507_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.184	chr17	-	4052	13	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	27	-5	intron_retention	FALSE	canonical	3	41	junction_4	111.960434479725	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGAGGTCTTCGTTTGT	NA	False	NA	-7	True	AATAAA	-10	NA	32569522	32540404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32540760_32540869_32540966_32551452_32551891_32551976_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.185	chr17	-	7472	5	NIC	ENSMUSG00000002625.11	novel	892	8	NA	NA	-1114	3647	intron_retention	FALSE	canonical	3	272	junction_2	41.5173156646718	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTACTCAGAAATCCGC	NA	False	NA	NA	False	NA	NA	NA	32556641	32547805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080
ES.14922.186	chr17	-	4046	8	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	-1963	2428	intron_retention	FALSE	canonical	3	272	junction_3	32.1977309379251	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTTCAGTATTGATT	NA	False	NA	NA	False	NA	NA	NA	32557490	32549024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244
ES.14922.19	chr17	-	8141	25	Fusion	ENSMUSG00000002625.11_ENSMUSG00000024045.7	novel	1987	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	68	junction_6	140.436218965131	1027	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32569566	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32536853_32537744_32537784_32540058_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.2	chr17	-	4227	14	NNC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	5	2	intron_retention	TRUE	canonical	0	0	junction_11	204.873463617606	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCATTAATTACTG	NA	False	NA	1	True	AATAAA	-18	NA	32540128	32522643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537501_32537628_32537744_32537784_32540058
ES.14922.20	chr17	-	9094	7	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	462	junction_4	63.9756898273781	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540126	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32525560_32528392_32528524_32529551_32530069_32531259_32534463_32534628_32536853_32537744_32537784_32540058
ES.14922.21	chr17	-	4130	13	FSM	ENSMUSG00000024045.7	ENSMUST00000235205.2	4183	13	51	2	-2	0	multi-exon	FALSE	canonical	3	426	junction_6	70.5212241495818	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540161	32522647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.24	chr17	-	3896	15	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	184.187792367309	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTGTGTTCATTAAT	NA	False	NA	-4	True	AATAAA	-13	NA	32540169	32522648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.25	chr17	-	6717	5	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	2055	-2	intron_retention	FALSE	canonical	3	540	junction_4	33.7962645864894	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32532649	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32528524_32529551_32529646_32529926_32530069_32531259
ES.14922.28	chr17	-	1719	6	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.283894813279	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540132	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32523512_32535210_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.29	chr17	-	4106	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	-37	2	-3	-2	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540136	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.3	chr17	-	3784	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	-52	-1	1	1	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTCATTAATTACT	NA	False	NA	0	True	AATAAA	-17	NA	32540211	32522644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.30	chr17	-	3341	12	FSM	ENSMUSG00000024045.7	ENSMUST00000236954.2	2021	12	1	-1321	1	-2	multi-exon	FALSE	canonical	3	19	junction_10	162.409186321627	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540086	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537744_32537784_32540058
ES.14922.31	chr17	-	4677	12	NNC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_6	216.601549867397	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32539645	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531384_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.32	chr17	-	4630	13	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	51	junction_6	198.238212484094	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540103	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.33	chr17	-	7590	9	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	6	-2	intron_retention	FALSE	canonical	3	462	junction_7	62.4294601930851	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540093	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32537784_32540058
ES.14922.34	chr17	-	4072	15	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	195.609982634124	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540122	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32532860_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.36	chr17	-	4254	14	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_4	225.190990602468	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540129	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529643_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.37	chr17	-	3720	14	NNC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.453425563769	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32540169	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529629_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.38	chr17	-	3855	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	146.652106144734	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTGTGTTCATTAA	NA	False	NA	-5	True	AATAAA	-12	NA	32539660	32522649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.4	chr17	-	8629	27	Fusion	ENSMUSG00000002625.11_ENSMUSG00000024045.7	novel	1987	15	NA	NA	3	0	intron_retention	TRUE	canonical	3	8	junction_11	194.869384263093	1027	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32569566	32522645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32537628_32537744_32537784_32540058_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.41	chr17	-	6113	29	Fusion	ENSMUSG00000002625.11_ENSMUSG00000024045.7	novel	1987	15	NA	NA	-34	-3	intron_retention	FALSE	canonical	0	0	junction_2	178.882414919262	1027	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATTTGTGTTCATTA	NA	False	NA	-6	True	AATAAA	-11	NA	32569514	32522650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_32524681_32525463_32525560_32528094_32528149_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.42	chr17	-	6804	10	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	12	-3	intron_retention	FALSE	canonical	3	462	junction_7	64.8664344710549	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATTTGTGTTCATTA	NA	False	NA	-6	True	AATAAA	-11	NA	32540200	32522650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536853_32537744_32537784_32540058
ES.14922.43	chr17	-	4241	15	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_12	242.793773244971	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATTTGTGTTCATTA	NA	False	NA	-6	True	AATAAA	-11	NA	32540082	32522650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537592_32537628_32537744_32537784_32540058
ES.14922.44	chr17	-	4149	14	NNC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_2	207.96472163275	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATTTGTGTTCATTA	NA	False	NA	-6	True	AATAAA	-11	NA	32540126	32522650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528094_32528149_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.45	chr17	-	3708	14	NNC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	161.531135365005	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGACATTTGTGTTCATT	NA	False	NA	-7	True	AATAAA	-10	NA	32540136	32522651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533078_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.48	chr17	-	2685	14	NNC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	160.809269949761	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTGGTTGGTT	NA	False	NA	-2	True	AATAAA	-21	NA	32540133	32523658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525553_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.49	chr17	-	2863	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	-145	1013	-92	7	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTGGTTGGTT	NA	False	NA	-2	True	AATAAA	-21	NA	32540304	32523658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.50	chr17	-	4433	13	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-3	4	intron_retention	FALSE	canonical	0	0	junction_12	168.074305657415	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTGTTTTTGGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	32540136	32523661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540054
ES.14922.51	chr17	-	3232	14	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	3	intron_retention	FALSE	canonical	3	51	junction_6	190.810820528526	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTGTTTTTGGTT	NA	False	NA	-6	True	AATAAA	-17	NA	32540117	32523662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.53	chr17	-	4823	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	4	3	intron_retention	FALSE	canonical	3	440	junction_8	70.858840003288	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTGTTTTTGGTT	NA	False	NA	-6	True	AATAAA	-17	NA	32540129	32523662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.54	chr17	-	4851	30	Fusion	ENSMUSG00000002625.11_ENSMUSG00000024045.7	novel	1987	15	NA	NA	-1	3	multi-exon	FALSE	canonical	0	0	junction_15	168.8915883305	1023	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTGTTTTTGGTT	NA	False	NA	-6	True	AATAAA	-17	NA	32569550	32523662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058_32540151_32540378_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ES.14922.55	chr17	-	6115	10	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	2	intron_retention	FALSE	canonical	3	462	junction_7	61.9757021285034	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTGTTTTTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	32540131	32523663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32537784_32540058
ES.14922.57	chr17	-	3584	14	FSM	ENSMUSG00000024045.7	ENSMUST00000237381.2	4570	14	-32	1018	-10	0	multi-exon	FALSE	canonical	3	68	junction_6	145.1715981155	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	-9	True	AATAAA	-14	NA	32540143	32523665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.58	chr17	-	4478	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	70	0	intron_retention	FALSE	canonical	3	70	junction_12	150.492524731297	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	-9	True	AATAAA	-14	NA	32539562	32523665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.6	chr17	-	6314	11	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	28	0	intron_retention	FALSE	canonical	1	2	junction_10	181.995714235253	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32539604	32522645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32539458
ES.14922.61	chr17	-	5038	9	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	1092	-1	intron_retention	FALSE	canonical	3	462	junction_7	60.1185027674509	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32536686	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160
ES.14922.62	chr17	-	3494	12	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	426	junction_6	73.0315226856535	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32540143	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.63	chr17	-	3969	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	5	-1	intron_retention	FALSE	canonical	3	68	junction_6	151.089446465772	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32540128	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.64	chr17	-	3133	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	-82	1020	-22	-1	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32540181	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.65	chr17	-	3591	13	NIC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	51	junction_6	198.238212484094	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32540082	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.66	chr17	-	2787	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	162.628119725476	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32539637	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539458
ES.14922.67	chr17	-	3115	13	FSM	ENSMUSG00000024045.7	ENSMUST00000235205.2	4183	13	46	1022	-7	-1	multi-exon	FALSE	canonical	3	426	junction_6	70.5212241495818	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32540166	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.68	chr17	-	3616	12	NIC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	70	junction_11	157.857975711928	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTTGTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	32539638	32523667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.69	chr17	-	4324	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	68	junction_6	155.994331323156	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGTTTGTTTTGTTT	NA	False	NA	-12	True	AATAAA	-11	NA	32540085	32523668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.7	chr17	-	3837	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	162.628119725476	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGTGTTCATTAATTA	NA	False	NA	-2	True	AATAAA	-15	NA	32539666	32522646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539458
ES.14922.70	chr17	-	5234	11	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	11	-3	intron_retention	FALSE	canonical	3	462	junction_7	63.4924404949125	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32540148	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.72	chr17	-	4418	5	NNC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	3338	-3	intron_retention	FALSE	canonical	0	0	junction_1	255.308147147716	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32531366	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525459_32528524_32529551_32529646_32529926_32530069_32531259
ES.14922.73	chr17	-	2979	15	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	212.519158800196	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32539646	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.74	chr17	-	2718	14	NNC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	-160	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	163.104787169577	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32539859	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539747
ES.14922.75	chr17	-	2324	12	NNC	ENSMUSG00000024045.7	novel	2021	12	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	167.435395213342	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32540082	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537737_32537784_32540058
ES.14922.76	chr17	-	3968	11	NNC	ENSMUSG00000024045.7	novel	2021	12	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	175.256840094759	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTTGTTTTGTT	NA	False	NA	-13	True	AATAAA	-10	NA	32540119	32523669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536850_32537740_32537784_32540058
ES.14922.79	chr17	-	4226	11	NNC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	9	-4	intron_retention	FALSE	canonical	0	0	junction_9	228.565548585083	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTTTTGTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-9	NA	32539648	32523670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537737_32537784_32539458
ES.14922.80	chr17	-	4488	11	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	2	junction_8	179.166291472475	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTTTTGTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-9	NA	32540082	32523670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32535642_32536819_32536853_32537744_32537784_32540058
ES.14922.81	chr17	-	3930	12	NIC	ENSMUSG00000024045.7	novel	4183	13	NA	NA	-159	-4	intron_retention	FALSE	canonical	3	70	junction_11	154.809827351587	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTTTTGTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-9	NA	32539858	32523670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536853_32537744_32537784_32539431
ES.14922.82	chr17	-	6463	10	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	462	junction_6	59.3379107680831	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTTTTTGTTTGTTTTG	NA	False	NA	-15	True	AATAAA	-8	NA	32540082	32523671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.84	chr17	-	5615	5	NIC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	2134	-6	intron_retention	FALSE	canonical	3	540	junction_4	33.7962645864894	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATTTTTTGTTTGTTTT	NA	False	NA	-16	True	AATAAA	-7	NA	32532570	32523672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32528524_32529551_32529646_32529926_32530069_32531259
ES.14922.86	chr17	-	2630	14	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	10	136	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	162.628119725476	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATTATTTAGGG	NA	False	NA	NA	False	AATATA	-16	NA	32539647	32523834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539458
ES.14922.87	chr17	-	3159	12	NIC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	-4	29	intron_retention	FALSE	canonical	3	426	junction_6	73.0315226856535	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGTGTGTGTGTTA	NA	False	NA	0	True	NA	NA	NA	32540082	32523941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.88	chr17	-	3003	14	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-1	20	intron_retention	FALSE	canonical	3	51	junction_6	187.326882605636	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGGATTTTTTTGTG	NA	False	NA	-9	True	AATAAA	-42	NA	32540079	32523950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536853_32537744_32537784_32540058
ES.14922.89	chr17	-	3315	14	FSM	ENSMUSG00000024045.7	ENSMUST00000237381.2	4570	14	-50	1305	-2	18	multi-exon	FALSE	canonical	3	68	junction_6	145.1715981155	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGAGGATTTTTTTG	NA	False	NA	-11	True	AATAAA	-40	NA	32540161	32523952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.90	chr17	-	3013	15	NNC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-3	16	intron_retention	FALSE	canonical	0	0	junction_2	244.42347828041	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATGTGAGGATTTTTT	NA	False	NA	-13	True	AATAAA	-38	NA	32540136	32523954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528094_32528149_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.91	chr17	-	4572	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	-18	9	intron_retention	FALSE	canonical	3	440	junction_8	70.858840003288	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGGACAGAATGTGAGG	NA	False	NA	-20	True	AATAAA	-31	NA	32540177	32523961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.92	chr17	-	2473	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	-58	1316	-5	9	multi-exon	FALSE	canonical	3	426	junction_6	74.0811964579343	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGGACAGAATGTGAGG	NA	False	NA	-20	True	AATAAA	-31	NA	32540217	32523961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.93	chr17	-	3427	14	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	9	intron_retention	FALSE	canonical	3	68	junction_6	187.841806791508	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGGACAGAATGTGAGG	NA	False	NA	-20	True	AATAAA	-31	NA	32539655	32523961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32539431
ES.14922.94	chr17	-	5839	9	NNC	ENSMUSG00000024045.7	novel	2021	12	NA	NA	-2	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	244.667631696553	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAAGTCCTAAAACGGA	NA	False	NA	-32	True	AATAAA	-19	NA	32540121	32523973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528392_32528513_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32534463_32534628_32537780_32540058
ES.14922.96	chr17	-	2941	7	NNC	ENSMUSG00000024045.7	novel	3260	12	NA	NA	1726	-5	intron_retention	FALSE	canonical	0	0	junction_2	282.660819514996	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32532978	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32524681_32525463_32525560_32528094_32528149_32528392_32528524_32529551_32529646_32529926_32530069_32531259
ES.14922.97	chr17	-	4088	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	2	-5	intron_retention	FALSE	canonical	3	440	junction_9	68.5072481972204	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540109	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.98	chr17	-	2776	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	-33	1328	1	-5	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540132	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14922.99	chr17	-	2533	15	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	184.187792367309	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTTAAGTCCTAAAACG	NA	False	NA	-34	True	AATAAA	-17	NA	32540133	32523975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ES.14923.1	chr17	+	212	1	Antisense	novelGene_ENSMUSG00000024050.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	32595165	32595377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32595200_32595400
ES.14924.1	chr17	-	4713	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	16	947	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTATTCCTTGTATCT	NA	False	NA	NA	False	NA	NA	NA	32583421	32572081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
ES.14924.10	chr17	-	4964	11	NIC	ENSMUSG00000024050.19	novel	4316	11	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	86.3344658870373	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCAGTGTGTTTTTTT	NA	False	NA	-6	True	ATTAAA	-28	NA	32608078	32573024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32586797_32587122_32606546_32606792_32607577
ES.14924.12	chr17	-	4762	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-19	3	intron_retention	FALSE	canonical	3	128	junction_4	29.9833287011299	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCCAGTGTGTTTTTT	NA	False	NA	-7	True	ATTAAA	-27	NA	32583456	32573025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32578469_32580434_32580939_32581766_32581938_32583155
ES.14924.13	chr17	-	5143	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-19	0	intron_retention	FALSE	canonical	3	73	junction_4	55.3711042302162	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583456	32573034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.15	chr17	-	4333	11	NNC	ENSMUSG00000024050.19	novel	4316	11	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	92.7278275384472	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32608380	32573034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32586797_32587122_32606546_32606792_32607412_32607536_32608233
ES.14924.17	chr17	-	3767	3	ISM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	5124	-585	5124	-3	intron_retention	FALSE	canonical	3	180	junction_2	22	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCCAGGGCAAACAGCC	NA	False	NA	-19	True	ATTAAA	-15	NA	32578313	32573037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32574158_32575396_32575593_32575862
ES.14924.18	chr17	-	4524	10	NIC	ENSMUSG00000024050.19	novel	4316	11	NA	NA	47	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	88.6166664925222	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32608043	32573039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32586797_32587122_32606546_32606792_32607577
ES.14924.19	chr17	-	6869	13	NIC	ENSMUSG00000024050.19	novel	6426	13	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	91.6309021139824	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32608097	32573039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32586797_32587122_32588260_32588395_32595496_32597473_32597813_32598093_32600057_32600131_32606546_32606792_32607577
ES.14924.2	chr17	-	5120	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-3	-1539	-3	945	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTATTCCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	32583440	32572083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.20	chr17	-	7769	5	ISM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	14	-583	14	-5	intron_retention	FALSE	canonical	3	180	junction_2	16.3611582719562	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32583423	32573039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916
ES.14924.21	chr17	-	6012	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	10	-5	intron_retention	FALSE	canonical	3	73	junction_5	47.2960533941963	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32583427	32573039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32581938_32583155
ES.14924.22	chr17	-	7469	15	NIC	ENSMUSG00000024050.19	novel	6426	13	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	90.1164779151778	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	False	NA	-21	True	ATTAAA	-13	NA	32608108	32573039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32586797_32587122_32588260_32588395_32595496_32597473_32597813_32598093_32600029_32600131_32606546_32606792_32607577
ES.14924.23	chr17	-	4033	9	NIC	ENSMUSG00000024050.19	novel	4316	11	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	90.6358614180943	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATCCCAGGGCAAACA	NA	False	NA	-22	True	ATTAAA	-12	NA	32608380	32573040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32586797_32587122_32606546_32606792_32608233
ES.14924.24	chr17	-	4592	11	NIC	ENSMUSG00000024050.19	novel	4316	11	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	86.8628804495914	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATATCCCAGGGCAAAC	NA	False	NA	-23	True	ATTAAA	-11	NA	32608379	32573041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32586797_32587122_32606546_32606792_32608233
ES.14924.25	chr17	-	3597	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	72.3755637091845	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATATCCCAGGGCAAAC	NA	False	NA	-23	True	ATTAAA	-11	NA	32583436	32573041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32583155
ES.14924.26	chr17	-	2712	6	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	79.1621121496894	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAATATCCCAGGGCAAA	NA	False	NA	-24	True	ATTAAA	-10	NA	32583437	32573042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32581766_32581938_32583155
ES.14924.28	chr17	-	4037	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-18	-441	-18	-147	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAACGTGGATCTTTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	32583455	32573181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.29	chr17	-	3647	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-18	-147	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAACGTGGATCTTTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	32583455	32573181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
ES.14924.3	chr17	-	4876	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-18	-1280	-18	686	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCTGCCTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	32583455	32572342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.30	chr17	-	4173	9	NIC	ENSMUSG00000024050.19	novel	4175	9	NA	NA	-83	-149	combination_of_known_junctions	FALSE	canonical	1	4	junction_8	90.0040797686416	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGAACGTGGATCTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	32608007	32573183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32586797_32587122_32606546_32606792_32607577
ES.14924.31	chr17	-	4969	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	6	-149	intron_retention	FALSE	canonical	3	73	junction_4	55.3711042302162	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGAACGTGGATCTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	32583431	32573183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.4	chr17	-	4234	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	-52	-604	-52	10	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTTTTTTTCTGTGA	NA	False	NA	0	True	ATTAAA	-34	NA	32583489	32573018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ES.14924.5	chr17	-	3811	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-22	7	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGTGTGTTTTTTTCTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32583459	32573021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
ES.14924.6	chr17	-	5760	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-5	7	intron_retention	FALSE	canonical	3	173	junction_6	16.5998661306516	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGTGTGTTTTTTTCTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32583442	32573021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32580939_32581766_32581938_32583155
ES.14924.7	chr17	-	3130	6	NIC	ENSMUSG00000024050.19	novel	4175	9	NA	NA	-19	7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	94.9652568047915	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGTGTGTTTTTTTCTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32583456	32573021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576956_32577916_32578469_32583155
ES.14924.8	chr17	-	4632	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	-18	7	intron_retention	FALSE	canonical	2	10	junction_4	69.5189822198865	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGTGTGTTTTTTTCTG	NA	False	NA	-3	True	ATTAAA	-31	NA	32583455	32573021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576956_32577916_32578469_32580434_32581938_32583155
ES.14925.1	chr17	-	3345	18	NNC	ENSMUSG00000052142.16	novel	3293	18	NA	NA	1	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.30741828064076	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGGTCTCCCAAATTCA	NA	False	NA	NA	False	AATACA	-20	NA	32622554	32609838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_32610204_32610309_32610374_32611019_32611178_32611371_32611763_32612496_32612616_32612714_32612917_32613011_32613249_32614048_32614194_32614795_32614941_32615321_32615859_32616283_32616383_32616467_32616595_32616994_32617066_32617890_32617953_32618058_32618138_32618263_32618404_32622029_32622374_32622494
ES.14925.2	chr17	-	4547	14	NIC	ENSMUSG00000052142.16	novel	3293	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	1.34999452113725	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCACCGGTTTCTCTGC	NA	False	NA	NA	False	AGTAAA	-11	NA	32622533	32609897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_32610210_32610309_32610374_32611019_32611763_32612496_32612917_32613011_32613249_32614048_32615859_32616283_32616383_32616467_32616595_32616994_32617066_32617890_32617953_32618058_32618138_32618263_32618404_32622029_32622374_32622494
ES.14926.1	chr17	+	2868	14	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	-1656	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	22.6347379252941	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTACTGGCATGGGGC	NA	False	NA	NA	False	AATAGA	-15	NA	32670040	32712295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32670364_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.10	chr17	+	3269	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13535	-2129	3746	1288	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAACCTCGTGAAGGT	NA	False	NA	NA	False	CATAAA	-9	NA	32700970	32713582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.2	chr17	+	2645	14	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	-1543	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3298954920214	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTTGTGCTCCGTTT	NA	False	NA	NA	False	ACTAAA	-17	NA	32670153	32712247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32670302_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.3	chr17	+	2604	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	-29	43	-29	3	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCCGTTTATTT	NA	False	NA	NA	False	ACTAAA	-21	NA	32671667	32712251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.4	chr17	+	4141	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	29	-1552	0	1552	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCATGTTTATGTGTGA	NA	False	NA	NA	False	TATAAA	-17	NA	32671725	32713846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.5	chr17	+	2425	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	29	164	0	-118	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATCTCATCCGGTCCTA	NA	False	NA	NA	False	AGTAAA	-21	NA	32671725	32712130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.6	chr17	+	2177	12	NNC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	122	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6003221717749	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCGTCCATCTCATCC	1458	False	NA	NA	False	AGTAAA	-14	NA	32687557	32712123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32687658_32689747_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.7	chr17	+	1844	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13511	-680	3722	-115	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCATCCGGTCCTAGAT	NA	False	NA	NA	False	AGTAAA	-24	NA	32700946	32712133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.8	chr17	+	1993	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13524	-842	3735	1	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTACTGGCATGGGGC	NA	False	NA	NA	False	AATAGA	-15	NA	32700959	32712295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14926.9	chr17	+	2933	7	NIC	ENSMUSG00000061126.6	novel	1599	12	NA	NA	3743	2	intron_retention	FALSE	canonical	3	49	junction_6	8.80183061767393	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGCTCCGTTTATT	NA	False	NA	NA	False	ACTAAA	-20	NA	32700967	32712250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ES.14927.1	chr17	+	2224	12	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-78	284	intron_retention	FALSE	canonical	2	9	junction_11	9.68427198951693	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTGGGGCAGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	32725357	32748152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747338_32747690
ES.14927.10	chr17	+	2980	13	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-7	15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10.8892786211433	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725428	32749132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32725553_32725867_32726083_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.11	chr17	+	3169	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-5	15	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	11.5647332678085	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725430	32749132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726067_32736867_32737215_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
ES.14927.12	chr17	+	3095	14	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-5	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.4686589343562	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725430	32749132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32737081_32737215_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.13	chr17	+	1642	10	ISM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	1	644	1	-644	intron_retention	FALSE	canonical	2	16	junction_2	8.70646134407099	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGTCTTGGTTGACC	NA	False	NA	NA	False	AATAGA	-13	NA	32725436	32747224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814
ES.14927.14	chr17	+	1977	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	1	-285	1	285	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGGCAGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	32725436	32748153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.15	chr17	+	2383	12	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	2	599	intron_retention	FALSE	canonical	1	1	junction_2	11.8879062096564	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCCTGTGTGGTGGTG	NA	False	NA	NA	False	TTTAAA	-17	NA	32725437	32748467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726083_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32747086_32747249_32747338_32747690
ES.14927.16	chr17	+	2486	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	25	-818	25	-431	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTGTATGTGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	32725460	32748686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.17	chr17	+	2198	12	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	25	597	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.173674347026	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTCCTGTGTGGTGG	NA	False	NA	NA	False	TTTAAA	-15	NA	32725460	32748465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32725553_32725867_32726083_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747690
ES.14927.18	chr17	+	3019	6	NNC	ENSMUSG00000091586.3	novel	2940	13	NA	NA	15146	25	intron_retention	FALSE	canonical	3	9	junction_5	12.893409169029	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGGAGCAAAAAAGTATG	9653	False	NA	NA	False	NA	NA	NA	32740637	32749142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32747338_32747690
ES.14927.19	chr17	+	1944	6	NIC	ENSMUSG00000091586.3	novel	2940	13	NA	NA	17635	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	12.6237870704476	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAAAATGAGAA	NA	False	NA	NA	False	NA	NA	NA	32743126	32749118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747690
ES.14927.2	chr17	+	3030	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	-37	-1300	-37	51	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTCTTTTAGTGTT	NA	False	NA	NA	False	AAAAAG	-11	NA	32725398	32749168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.3	chr17	+	3201	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-21	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	13.1772109677613	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725414	32749132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726083_32736867_32737215_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
ES.14927.4	chr17	+	3995	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-16	819	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12.7744862910412	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGAGTTCTGATGTGAT	NA	False	NA	NA	False	TATAAA	-27	NA	32725419	32749936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726083_32736867_32737215_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ES.14927.5	chr17	+	3091	12	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-16	56	intron_retention	FALSE	canonical	2	9	junction_11	9.66804397901485	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTAGTGTTCTGTT	NA	False	NA	NA	False	AAAAAG	-16	NA	32725419	32749173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32747086_32747249_32747338_32747690
ES.14927.7	chr17	+	1655	11	ISM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	-12	572	-12	-572	intron_retention	FALSE	canonical	2	16	junction_2	8.26075057122535	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCTTTTATTCCCT	NA	False	NA	NA	False	NA	NA	NA	32725423	32747296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020
ES.14927.8	chr17	+	2846	12	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-12	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	11.3857965745205	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTACTTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	32725423	32749132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747129_32747773
ES.14927.9	chr17	+	3275	14	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.1930894093657	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAAAATGAGAA	NA	False	NA	NA	False	NA	NA	NA	32725427	32749118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32725553_32725867_32726083_32736867_32737215_32739336_32739391_32739476_32739605_32741091_32741214_32742000_32742102_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
ES.14928.1	chr17	+	9126	8	NIC	ENSMUSG00000048440.17	novel	2065	12	NA	NA	1	0	intron_retention	TRUE	canonical	3	62	junction_7	13.0712334099404	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755532	32770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32761979_32763081_32763204_32763856_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.10	chr17	+	3427	12	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	4	-5	intron_retention	FALSE	canonical	3	41	junction_1	14.9550290057219	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	False	NA	14	True	NA	NA	NA	32755554	32770765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.12	chr17	+	3095	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	24	-892	-2	891	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTAGCTGCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	32755566	32771663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.13	chr17	+	9208	8	NNC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_2	30.1208450432993	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGACTAGCATGTCTT	NA	False	NA	12	True	NA	NA	NA	32755575	32770763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32755630_32755971_32761766_32761874_32761979_32763081_32763204_32763856_32765734_32769226_32769361_32769476_32769542_32769705
ES.14928.14	chr17	+	3749	5	NIC	ENSMUSG00000048440.17	novel	804	7	NA	NA	1	529	intron_retention	FALSE	canonical	3	74	junction_1	13.4791505667086	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCGTTGACTTCCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	32755575	32763928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32756171_32759244_32761766_32761850_32761979_32763081
ES.14928.15	chr17	+	6675	10	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	62	junction_9	11.9298360279729	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755576	32770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.16	chr17	+	4298	8	NIC	ENSMUSG00000048440.17	novel	2078	12	NA	NA	-2124	-5	intron_retention	FALSE	canonical	3	62	junction_7	13.2757258919874	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	False	NA	14	True	NA	NA	NA	32759482	32770765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32761979_32763081_32763204_32763856_32764128_32765342_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.17	chr17	+	4921	4	NIC	ENSMUSG00000048440.17	novel	1040	6	NA	NA	-1009	-3	intron_retention	FALSE	canonical	3	71	junction_2	16.739839372653	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTAGCATGTCTTGGTT	NA	False	NA	16	True	NA	NA	NA	32760597	32770767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32761979_32763081_32763204_32763856_32765734_32769226
ES.14928.18	chr17	+	3596	4	NIC	ENSMUSG00000048440.17	novel	891	5	NA	NA	-1379	640	intron_retention	FALSE	canonical	3	62	junction_3	6.23609564462324	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTCGTTTAGCAAGAG	NA	False	NA	NA	False	NA	NA	NA	32763966	32771412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32765734_32769226_32769361_32769476_32769789_32770029
ES.14928.19	chr17	+	4385	6	ISM	ENSMUSG00000048440.17	ENSMUST00000165515.8	2078	12	9167	-2538	-628	2538	3prime_fragment	FALSE	canonical	3	62	junction_5	5.31413210223457	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGATAAGTTAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	32764717	32773310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.2	chr17	+	2517	12	NNC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	24.9611268022834	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755532	32770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_32755630_32755886_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.3	chr17	+	2236	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-10	1	1	0	multi-exon	FALSE	canonical	3	62	junction_12	10.7625895273086	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755532	32770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.4	chr17	+	2078	11	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	25.9246986482003	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	False	NA	14	True	NA	NA	NA	32755537	32770765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32770029
ES.14928.5	chr17	+	2512	11	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	62	junction_10	11.4232219623012	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755537	32770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761979_32763081_32763204_32763856_32764128_32765342_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.7	chr17	+	2086	12	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	20.9331876957963	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	19	True	NA	NA	NA	32755537	32770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.8	chr17	+	2427	12	NIC	ENSMUSG00000048440.17	novel	2242	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	62	junction_11	11.0812178225027	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755537	32770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ES.14928.9	chr17	+	804	7	ISM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	-4	6850	-4	522	5prime_fragment	FALSE	canonical	3	71	junction_3	12.7725834852973	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTTGTTCGTTGAC	NA	False	NA	NA	False	AATAAA	-12	NA	32755538	32763921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856
ES.14929.1	chr17	+	2852	3	Intergenic	novelGene_12494	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	32773907	32783241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32774090_32780096_32782625_32783099
ES.1493.1	chr1	-	157	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATCAGACATGTAA	NA	False	NA	NA	False	NA	NA	NA	136918637	136918480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136918500_136918600
ES.14930.1	chr17	+	1094	5	ISM	ENSMUSG00000090700.3	ENSMUST00000165061.2	1858	12	2637	5109	2637	1763	internal_fragment	FALSE	canonical	2	2	junction_3	2.59807621135332	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTTTTGTGTGTA	1891	False	NA	NA	False	TTTAAA	-12	NA	32881020	32890552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32881237_32886789_32886844_32886927_32887056_32888747_32888870_32889978
ES.14931.1	chr17	+	1788	12	ISM	ENSMUSG00000073424.10	ENSMUST00000008801.7	2095	13	552	2	552	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGCTGGGTTTTAT	2770	False	NA	NA	False	ATTAAA	-15	NA	32905204	32922324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_32905232_32909617_32909763_32911389_32911444_32911531_32911660_32914247_32914370_32916746_32917018_32918904_32918972_32919178_32919309_32920877_32921012_32921099_32921165_32921305_32921389_32921762
ES.14932.1	chr17	+	172	1	Intergenic	novelGene_12495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATGGGGTA	NA	False	NA	NA	False	NA	NA	NA	32951377	32951549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32951400_32951500
ES.14933.1	chr17	+	196	1	Intergenic	novelGene_12496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAGTGGAGAC	NA	False	NA	NA	False	NA	NA	NA	32952137	32952333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32952100_32952300
ES.14934.1	chr17	+	171	1	Intergenic	novelGene_12497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATAAGCTTTAAGAGTT	4009	False	NA	NA	False	NA	NA	NA	32969850	32970021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32969800_32970000
ES.14935.1	chr17	+	158	1	Intergenic	novelGene_12498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	9566	False	NA	NA	False	NA	NA	NA	32981170	32981328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_32981200_32981300
ES.14936.1	chr17	+	2635	3	Antisense	novelGene_ENSMUSG00000024298.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGGGAAATGCCCCCAA	375	False	NA	NA	False	NA	NA	NA	32993548	32997514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_32994983_32996130_32996191_32996373
ES.14937.1	chr17	-	10869	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	-18	0	-18	0	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGGTGCTGTCAT	NA	False	NA	-5	True	NA	NA	NA	33007279	32984469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ES.14937.2	chr17	-	4110	1	ISM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	18490	192	17750	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGTAACTATTATGA	NA	False	NA	NA	False	AATAAA	-18	NA	32988771	32984661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_32984700_32988800
ES.14937.3	chr17	-	5115	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	13	5723	13	2033	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCAGCATTTCACAGCA	NA	False	NA	NA	False	NA	NA	NA	33007248	32990192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ES.14937.4	chr17	-	3827	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	2	7022	2	734	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	33007259	32991491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ES.14937.5	chr17	-	2780	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	-6	8077	-6	-321	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGACTGGACATATTTT	NA	False	NA	NA	False	GATAAA	-12	NA	33007267	32992546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ES.14938.1	chr17	-	4972	4	NNC	ENSMUSG00000055202.12	novel	3536	4	NA	NA	-3150	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.43650214343336	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGAATTTTTGCACT	NA	False	NA	-8	True	ATTAAA	-15	NA	33023062	33014659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33017848_33019360_33019422_33019785_33020225_33021778
ES.14938.2	chr17	-	2292	5	NNC	ENSMUSG00000055202.12	novel	3536	4	NA	NA	-4	417	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	5.02493781056044	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAATTGATGAAGGAAGA	4480	False	NA	NA	False	NA	NA	NA	33028909	33015962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33017848_33019360_33019422_33019785_33019913_33027997_33028063_33028755
ES.14938.3	chr17	-	2264	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	-41	1313	-41	417	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAATTGATGAAGGAAGA	4443	False	NA	NA	False	NA	NA	NA	33028946	33015962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
ES.14938.4	chr17	-	6415	3	FSM	ENSMUSG00002076627.1_ENSMUSG00000055202.12	ENSMUST00000080905.7	1656	3	-4342	-417	-303	417	multi-exon	FALSE	canonical	3	11	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAATTGATGAAGGAAGA	9135	False	NA	NA	False	NA	NA	NA	33024254	33015962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33017848_33019360_33019422_33019785
ES.14939.1	chr17	-	180	1	Intergenic	novelGene_12499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGCAAACAAAAAA	849	False	NA	NA	False	NA	NA	NA	33032540	33032360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33032400_33032500
ES.1494.1	chr1	+	175	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136920432	136920607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136920400_136920600
ES.14940.1	chr17	+	265	1	Intergenic	novelGene_12500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCCCTTTTATCCCTT	NA	False	NA	NA	False	NA	NA	NA	33056104	33056369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33056100_33056400
ES.14941.1	chr17	+	178	1	NIC	ENSMUSG00000117601.2	novel	438	2	NA	NA	192	-714	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATTTAAAAAAAAAG	5915	False	NA	14	True	NA	NA	NA	33098386	33098564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33098400_33098600
ES.14942.1	chr17	-	3019	1	ISM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	10827	967	2766	-961	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTTTTTGTCATGAT	NA	False	NA	NA	False	ATTAAA	-28	NA	33038408	33035389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_33035400_33038400
ES.14942.10	chr17	-	865	1	Intergenic	novelGene_12501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGAAGGTAGGAAA	1791	False	NA	NA	False	NA	NA	NA	33066248	33065383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33065400_33066200
ES.14942.11	chr17	-	4246	3	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	74	7561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGTAATGTGACAGGGG	NA	False	NA	NA	False	AATAAA	-36	NA	33096842	33075074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33079037_33083417_33083596_33096736
ES.14942.12	chr17	-	4455	4	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	77	7555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.942809041582063	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATAGTGTAATGTGA	NA	False	NA	NA	False	AATAAA	-30	NA	33096839	33075080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33079037_33082096_33082315_33083417_33083596_33096736
ES.14942.13	chr17	-	4153	3	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	13388	7538	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATAATTTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	33083528	33075097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33079037_33082096_33082200_33083417
ES.14942.14	chr17	-	2806	4	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	12	5786	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.63299316185545	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATTAGGGAACAGGG	NA	False	NA	NA	False	NA	NA	NA	33096904	33076849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33079037_33082096_33082315_33083417_33083596_33096681
ES.14942.15	chr17	-	3308	5	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	-74	3347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.06155281280883	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCACTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	33096990	33079288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33082004_33082096_33082315_33083417_33083596_33096681_33096851_33096962
ES.14942.16	chr17	-	3518	5	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	362	3341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.82915619758885	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGTTAGTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	33096554	33079294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33081767_33082096_33082200_33083417_33083596_33084006_33084199_33095981
ES.14942.17	chr17	-	3385	3	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	44	3337	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAACTTCTGTTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	33096872	33079298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33082315_33083417_33083596_33096681
ES.14942.18	chr17	-	2649	3	NNC	ENSMUSG00000117654.2	novel	1195	2	NA	NA	39	-5693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGATTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	33096877	33088328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33090663_33095981_33096101_33096681
ES.14942.19	chr17	-	2168	1	Intergenic	novelGene_12502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	33092612	33090444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33090400_33092600
ES.14942.2	chr17	-	4257	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	4	1751	4	-1745	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATACATATACATACATA	NA	False	NA	NA	False	AATAAA	-21	NA	33049231	33036173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
ES.14942.20	chr17	-	1512	5	Fusion	ENSMUSG00000117654.2_ENSMUSG00000095325.4	novel	5337	4	NA	NA	-7	3090	multi-exon	FALSE	canonical	0	0	junction_2	78.0144217436751	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCATTGGTGTTTTAC	NA	False	NA	NA	False	TTTAAA	-17	NA	33110571	33095102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33096101_33096681_33096851_33104676_33104738_33104930_33105058_33110414
ES.14942.21	chr17	-	3597	6	Fusion	ENSMUSG00000117654.2_ENSMUSG00000095325.4	novel	754	5	NA	NA	-15	3080	multi-exon	FALSE	canonical	0	0	junction_2	77.7086867731015	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTGAATGTGCATT	NA	False	NA	NA	False	TTTAAA	-7	NA	33110579	33095112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33096101_33096681_33096851_33101052_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.22	chr17	-	5317	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	17	3	17	-3	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTTTCCAGTTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	33110599	33098195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.23	chr17	-	3493	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	88	1756	-21	-1747	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACTCAATTGCCCAT	NA	False	NA	NA	False	NA	NA	NA	33110528	33099948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.24	chr17	-	3234	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	-7	2110	-7	-2101	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTTGCCTGCATCT	NA	False	NA	NA	False	NA	NA	NA	33110623	33100302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.25	chr17	-	3113	5	NNC	ENSMUSG00000095325.4	novel	754	5	NA	NA	134	-2101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.0391473944669	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTTGCCTGCATCT	NA	False	NA	NA	False	NA	NA	NA	33110373	33100302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33102251_33102446_33103140_33104676_33104738_33104930_33105058_33110089
ES.14942.26	chr17	-	3369	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	72	-2103	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	76.856287243718	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTTTGCCTGCAT	NA	False	NA	NA	False	NA	NA	NA	33110435	33100304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33110089
ES.14942.27	chr17	-	2577	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	-17	2777	-17	1866	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGTCATGGTGTCTC	NA	False	NA	-2	True	NA	NA	NA	33110633	33100969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.28	chr17	-	7255	3	FSM	ENSMUSG00000095325.4	ENSMUST00000178401.2	5126	3	-4902	2773	548	1861	multi-exon	FALSE	canonical	3	167	junction_1	2	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCCTTTGTCATGGT	NA	False	NA	-7	True	NA	NA	NA	33109959	33100974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930
ES.14942.29	chr17	-	2630	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	141	1861	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	76.856287243718	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCCTTTGTCATGGT	NA	False	NA	-7	True	NA	NA	NA	33110366	33100974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33110089
ES.14942.3	chr17	-	4186	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202759.2	374	4	19	-3831	1	-1792	multi-exon	FALSE	canonical	2	8	junction_2	14.4452991200136	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGACTAAGCACCGTG	NA	False	NA	62	True	ACTAAA	-27	NA	33049201	33036220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33040074_33040751_33040813_33041041_33041175_33049062
ES.14942.30	chr17	-	2455	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	-3126	1861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.6840985112811	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCCTTTGTCATGGT	NA	False	NA	-7	True	NA	NA	NA	33113742	33100974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33113640
ES.14942.31	chr17	-	2383	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	16	1859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.6840985112811	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110600	33100976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33110568
ES.14942.32	chr17	-	2564	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	17	1859	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	73.0540135029479	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110599	33100976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104766_33104930_33105058_33110414
ES.14942.33	chr17	-	2608	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	-4935	1859	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	79.6840985112811	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33115551	33100976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33115294
ES.14942.34	chr17	-	2343	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	81	2913	-28	1730	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTCTTTGTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	33110535	33101105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ES.14942.35	chr17	-	87	1	Intergenic	novelGene_12503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATCTGTGTTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	33114427	33114340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33114300_33114400
ES.14942.4	chr17	-	4180	5	NNC	ENSMUSG00000095253.5	novel	6012	4	NA	NA	-4	-1873	intron_retention	FALSE	canonical	1	1	junction_3	13.1719398723195	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTGTATCTTTGAT	NA	False	NA	-19	True	NA	NA	NA	33049193	33036301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33040074_33040751_33040813_33041047_33041175_33042404_33042494_33049062
ES.14942.5	chr17	-	4766	3	FSM	ENSMUSG00000095253.5	ENSMUST00000201499.2	651	3	-1	-4114	-1	-1873	multi-exon	FALSE	canonical	3	24	junction_1	9.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTGTATCTTTGAT	NA	False	NA	-19	True	NA	NA	NA	33049190	33036301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33040813_33041047_33041175_33049062
ES.14942.6	chr17	-	4073	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	44	1895	-2	-1889	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTTTCATGCTTATT	NA	False	NA	-35	True	NA	NA	NA	33049191	33036317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
ES.14942.7	chr17	-	2622	4	NNC	ENSMUSG00000095253.5	novel	6012	4	NA	NA	11	2227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5941909605289	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTGGGGGTGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	33049178	33037570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33039889_33040751_33040813_33041047_33041175_33049062
ES.14942.9	chr17	-	2821	5	Fusion	ENSMUSG00000095253.5_ENSMUSG00000117654.2	novel	6012	4	NA	NA	46	2045	intron_retention	FALSE	canonical	1	1	junction_4	12.4774797134678	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCCCGGCTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33096870	33037752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33040074_33040751_33040813_33041047_33041175_33083417_33083596_33096736
ES.14943.1	chr17	+	195	1	Intergenic	novelGene_12504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGGAAGCATTTG	NA	False	NA	NA	False	NA	NA	NA	33127421	33127616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33127400_33127600
ES.14944.1	chr17	+	2869	1	Antisense	novelGene_ENSMUSG00000024055.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACTACTTTTCTTAGCT	7728	False	NA	NA	False	NA	NA	NA	33147463	33150332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_33147500_33150300
ES.14945.1	chr17	-	4402	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	40	-2690	-1	2690	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAATGTGCTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	33166336	33140971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.10	chr17	-	1754	10	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	6150	1	intron_retention	FALSE	canonical	3	145	junction_8	8.71496513383448	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAGTGACTATGAGCA	NA	False	NA	-19	True	AATAAA	-17	NA	33160159	33143673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029
ES.14945.12	chr17	-	1574	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	46.5204122975128	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAGTGACTATGAGCA	NA	False	NA	-19	True	AATAAA	-17	NA	33166338	33143673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.2	chr17	-	1761	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	-5	-4	-5	4	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATCAGACCAAAATTTTA	NA	False	NA	-3	True	AATAAA	-33	NA	33166381	33143657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.3	chr17	-	1957	5	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	342	0	intron_retention	FALSE	canonical	3	161	junction_4	4.06201920231798	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33149640	33143661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33144576_33144663_33144798_33148111_33148242_33148443_33149097_33149514
ES.14945.4	chr17	-	2176	11	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	1	0	intron_retention	FALSE	canonical	2	129	junction_10	14.76787053031	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166352	33143661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33143929_33144297_33144576_33144663_33144798_33148111_33148242_33148443_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.7	chr17	-	1730	11	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	48.6498715311767	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166352	33143661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33143929_33144297_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.8	chr17	-	1856	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	1	-2	intron_retention	FALSE	canonical	2	129	junction_11	14.0806414204012	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATGAGCATCAGACCAAA	NA	False	NA	-9	True	AATAAA	-27	NA	33166352	33143663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33143929_33144297_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ES.14945.9	chr17	-	1399	10	FSM	ENSMUSG00000024055.16	ENSMUST00000139353.8	1389	10	1	-11	1	-2	multi-exon	FALSE	canonical	2	8	junction_8	48.4694125260177	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATGAGCATCAGACCAAA	NA	False	NA	-9	True	AATAAA	-27	NA	33166352	33143663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33165778_33165978_33166286
ES.14946.1	chr17	+	179	1	Intergenic	novelGene_12505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	33169511	33169690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33169500_33169700
ES.14947.1	chr17	+	2406	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-28	-2	-28	2	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGGCTGGCATAGTC	NA	False	NA	NA	False	AATAAA	-39	NA	33184759	33198209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ES.14947.2	chr17	+	1920	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	-11	467	-11	-467	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCAACGAAGCCTGTG	NA	False	NA	NA	False	AGTAAA	-15	NA	33184776	33197740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ES.14947.4	chr17	+	2190	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	13	173	13	-173	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATAAGGTCAGTGTCT	NA	False	NA	69	True	AATAAA	-19	NA	33184800	33198034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ES.14947.5	chr17	+	2013	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	34	329	3	-329	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCATGTGGTTGAGTCC	NA	False	NA	-87	True	TATAAA	-42	NA	33184821	33197878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ES.14947.6	chr17	+	5112	3	ISM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	6781	467	6750	-467	3prime_fragment	FALSE	canonical	3	72	junction_1	5.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCAACGAAGCCTGTG	NA	False	NA	NA	False	AGTAAA	-15	NA	33191568	33197740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33195015_33195200_33195259_33196132
ES.14947.7	chr17	+	3275	2	NIC	ENSMUSG00000053600.9	novel	2376	4	NA	NA	9072	-168	intron_retention	FALSE	canonical	3	83	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGTCAGTGTCTCACAA	NA	False	NA	74	True	AATAAA	-24	NA	33193890	33198039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33195259_33196132
ES.14948.1	chr17	-	811	4	NIC	ENSMUSG00000024295.10	novel	897	4	NA	NA	1	23	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGCTGGAATTGGTC	NA	False	NA	NA	False	ATTAAA	-36	NA	33184691	33174947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33175278_33176622_33176849_33179548_33179752_33184639
ES.14948.2	chr17	-	577	3	NIC	ENSMUSG00000024295.10	novel	897	4	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGATATTCATTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	33184684	33174971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33175278_33176622_33176849_33184639
ES.14948.4	chr17	-	631	1	Genic_Genomic	ENSMUSG00000024295.10	novel	NA	NA	NA	NA	-505	-7973	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTTATCACATTTCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	33185197	33184566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_33184600_33185200
ES.14949.1	chr17	-	5750	1	Antisense	novelGene_ENSMUSG00000053600.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCTTTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33194002	33188252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_33188300_33194000
ES.14949.2	chr17	-	3448	1	Antisense	novelGene_ENSMUSG00000053600.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGACTTAGCAAACCTC	NA	False	NA	NA	False	NA	NA	NA	33194002	33190554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_33190600_33194000
ES.14949.3	chr17	-	3035	1	Intergenic	novelGene_12506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCCAGGCATAGTAGTG	NA	False	NA	NA	False	GATAAA	-19	NA	33194002	33190967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33191000_33194000
ES.1495.1	chr1	-	186	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTTCAGCA	5681	False	NA	NA	False	NA	NA	NA	136923623	136923437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136923400_136923600
ES.14950.1	chr17	+	173	1	Intergenic	novelGene_12507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATGAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	33211015	33211188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33211000_33211200
ES.14950.2	chr17	+	328	1	Intergenic	novelGene_12508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGCTGTCTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	33211017	33211345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33211000_33211300
ES.14951.1	chr17	+	2919	5	FSM	ENSMUSG00000053390.17	ENSMUST00000141815.3	3118	5	-15	214	-5	-214	multi-exon	FALSE	canonical	0	0	junction_3	19.9170153386495	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGATTTTGTGGAAT	NA	False	NA	6	True	AATAAA	-13	NA	33212097	33224217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221496_33221607_33221731
ES.14951.2	chr17	+	2798	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-56	208	2	-208	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGGAATTTGTGC	NA	False	NA	12	True	AATAAA	-19	NA	33212114	33224223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
ES.14951.3	chr17	+	3114	5	FSM	ENSMUSG00000053390.17	ENSMUST00000141815.3	3118	5	3	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_3	19.9170153386495	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGGTGATCGGTCTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	33212115	33224430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221496_33221607_33221731
ES.14951.4	chr17	+	3002	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	-55	3	3	-3	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTATGGTGATCGGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	33212115	33224428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
ES.14951.5	chr17	+	2927	5	NNC	ENSMUSG00000053390.17	novel	3118	5	NA	NA	9	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9546360528074	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGATTTTGTGGAAT	NA	False	NA	6	True	AATAAA	-13	NA	33212121	33224217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33212233_33215248_33215391_33220597_33220725_33220931_33220993_33221731
ES.14951.6	chr17	+	3161	5	NNC	ENSMUSG00000053390.17	novel	3118	5	NA	NA	9	-217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1990098767242	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAGTCTGATTTTGTGG	NA	False	NA	3	True	AATAAA	-10	NA	33212121	33224214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33212233_33212552_33212932_33220597_33220725_33220931_33220993_33221731
ES.14951.7	chr17	+	3069	6	NNC	ENSMUSG00000053390.17	novel	724	5	NA	NA	14	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTCTGATTTTGTGGA	NA	False	NA	4	True	AATAAA	-11	NA	33212126	33224215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33212233_33213528_33213678_33215248_33215391_33220597_33220725_33220931_33220993_33221731
ES.14951.8	chr17	+	195	1	Genic_Genomic	ENSMUSG00000053390.17	novel	NA	NA	NA	NA	4221	34	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTTATTATTTT	NA	False	NA	NA	False	NA	NA	NA	33216395	33216590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_33216400_33216600
ES.14951.9	chr17	+	2876	3	ISM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	8229	210	8225	-210	3prime_fragment	FALSE	canonical	3	36	junction_2	4	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTGTGGAATTTGT	NA	False	NA	10	True	AATAAA	-17	NA	33220399	33224221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33220725_33220931_33220993_33221731
ES.14952.1	chr17	-	3426	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-6	-13	-6	13	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTGTGTATGTGTT	2753	False	NA	-3	True	NA	NA	NA	33252382	33235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.2	chr17	-	1955	5	NNC	ENSMUSG00000067430.8	novel	3407	4	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.1431667088906	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCTGTTCAAATGAGA	2756	False	NA	-19	True	NA	NA	NA	33252379	33235839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33235929_33237380_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.3	chr17	-	3207	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	57	143	57	-143	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTGTATGTGTTCTA	2816	False	NA	NA	False	NA	NA	NA	33252319	33235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.4	chr17	-	3095	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	-4	316	-4	-316	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGTTTGTTGGTAAATG	2755	False	NA	NA	False	AATAAA	-18	NA	33252380	33236152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.5	chr17	-	2571	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	24	812	24	-812	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATGTGTACAAAGC	2783	False	NA	NA	False	NA	NA	NA	33252352	33236648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.6	chr17	-	1679	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	56	1672	56	1224	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACCGTCATGAACGAAT	2815	False	NA	NA	False	NA	NA	NA	33252320	33237508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ES.14952.7	chr17	-	2333	2	NNC	ENSMUSG00000067430.8	novel	3407	4	NA	NA	-3	-8320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	2756	False	NA	NA	False	NA	NA	NA	33252379	33247052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33249262_33252255
ES.14953.1	chr17	+	3972	4	FSM	ENSMUSG00000067424.14	ENSMUST00000131722.9	6440	4	-7	2475	-7	-2475	multi-exon	FALSE	canonical	1	2	junction_1	9.7410927974683	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTTTGTTAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	33308276	33327204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33308454_33321204_33321332_33321516_33321578_33323597
ES.14953.2	chr17	+	3948	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	-15	-3175	-15	-2472	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTTAGCGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	33311416	33327207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14953.3	chr17	+	6410	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	-5	-5647	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGTGTGAGTCACTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	33311426	33329679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14953.4	chr17	+	3789	3	NIC	ENSMUSG00000067424.14	novel	758	4	NA	NA	17	-2472	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTTAGCGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	33311448	33327207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33311567_33321516_33321578_33323597
ES.14953.5	chr17	+	4928	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	17	-4187	17	-1460	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTATGGCTAATTC	NA	False	NA	NA	False	CATAAA	-13	NA	33311448	33328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14953.6	chr17	+	3708	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	22	-2972	22	-2675	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATATAAAATAGATATTCAT	NA	False	NA	NA	False	AATATA	-5	NA	33311453	33327004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14953.7	chr17	+	5027	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	33	-4302	33	-1345	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTAATATTTGCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	33311464	33328334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14953.8	chr17	+	5198	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	92	-4532	92	-1115	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCAAATTGAAAAGCCT	NA	False	NA	NA	False	AATAAA	-28	NA	33311523	33328564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ES.14954.1	chr17	-	3219	1	Genic_Genomic	ENSMUSG00000048602.10	novel	NA	NA	NA	NA	25488	2558	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTATAGTAATACTAAGA	NA	False	NA	NA	False	NA	NA	NA	33332985	33329766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_33329800_33333000
ES.14955.1	chr17	-	2743	1	Intergenic	novelGene_12509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	33448924	33446181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33446200_33448900
ES.14956.1	chr17	-	3953	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	90	-499	90	499	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTTCAATTGTTAAGA	NA	False	NA	NA	False	ATTAAA	-11	NA	33474029	33458192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ES.14956.2	chr17	-	3750	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	10	-216	10	216	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	33474109	33458475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ES.14956.3	chr17	-	3961	3	NIC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	33	213	intron_retention	FALSE	canonical	3	111	junction_2	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	33474086	33458478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33461925_33462686_33463109_33473993
ES.14956.4	chr17	-	3544	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	1	-1	1	1	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTGTTGTGGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	33474118	33458690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ES.14956.5	chr17	-	3771	3	NIC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	10	0	intron_retention	FALSE	canonical	3	111	junction_2	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474109	33458691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33461925_33462686_33463109_33473993
ES.14956.6	chr17	-	3591	5	NNC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.3034684814104	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTTGTTGTGTTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	33474109	33458693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33461925_33462686_33462745_33462836_33462896_33462981_33463109_33473993
ES.14956.7	chr17	-	3578	5	NNC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.5349313370212	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTGTTGTGTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	33474106	33458694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33461925_33462686_33462745_33462981_33463109_33468014_33468065_33473993
ES.14956.8	chr17	-	2963	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	4	577	4	-577	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATATTTGCCTATTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	33474115	33459268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ES.14957.1	chr17	+	3273	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	-32	2547	-32	527	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTCCTTCTTTCTTTAA	NA	False	NA	31	True	ATTAAA	-35	NA	33508485	33523668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.10	chr17	+	3599	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	33	681	intron_retention	FALSE	canonical	3	48	junction_2	25	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGTTTCAGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	33508550	33523822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33508644_33519554_33519977_33520738
ES.14957.11	chr17	+	5827	2	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	-4276	506	intron_retention	FALSE	canonical	3	48	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGATCCTAGAATCTGAAA	NA	False	NA	10	True	AATAAA	-29	NA	33517058	33523647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33519977_33520738
ES.14957.12	chr17	+	5171	2	ISM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	11193	572	-1624	-572	3prime_fragment	FALSE	canonical	3	48	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTATTCTTACTCAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	33519710	33525643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33519977_33520738
ES.14957.13	chr17	+	3920	1	Genic_Genomic	ENSMUSG00000096910.3	novel	NA	NA	NA	NA	2021	1060	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTAAAGTACCAG	NA	False	NA	NA	False	AATAAA	-13	NA	33523355	33527275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_33523400_33527300
ES.14957.2	chr17	+	2311	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	-8	3485	-8	-411	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTGATCAGGAACATAT	NA	False	NA	NA	False	AATAAA	-14	NA	33508509	33522730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.3	chr17	+	3473	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	-8	514	intron_retention	FALSE	canonical	3	48	junction_2	25	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATCTGAAAACTCATTC	NA	False	NA	18	True	AATAAA	-37	NA	33508509	33523655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33508644_33519554_33519977_33520738
ES.14957.4	chr17	+	6023	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	48	junction_2	25	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	14	True	ATTAAA	-16	NA	33508517	33526213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33508644_33519554_33519977_33520738
ES.14957.5	chr17	+	5786	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	0	2	0	-2	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	14	True	ATTAAA	-16	NA	33508517	33526213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.6	chr17	+	3403	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	2	2383	2	691	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTTCTGCTCCATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	33508519	33523832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.7	chr17	+	3137	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	2	2649	2	425	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTTACTATGTCAAAT	NA	False	NA	19	True	AATAAA	-23	NA	33508519	33523566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.8	chr17	+	5993	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	6	-211	6	211	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	33508523	33526426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ES.14957.9	chr17	+	5626	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	7	-392	intron_retention	FALSE	canonical	3	48	junction_2	25	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATGAACTCTTTGA	NA	False	NA	NA	False	AATAAA	-45	NA	33508524	33525823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33508644_33519554_33519977_33520738
ES.14958.1	chr17	-	3671	1	Intergenic	novelGene_12510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCGGCGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	33517909	33514238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33514200_33517900
ES.14959.1	chr17	+	3572	1	Intergenic	novelGene_12511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAGAAGCAGTCATTAA	370	False	NA	NA	False	NA	NA	NA	33557568	33561140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33557600_33561100
ES.1496.1	chr1	-	164	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8660	False	NA	NA	False	NA	NA	NA	136940935	136940771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_136940800_136940900
ES.14960.1	chr17	-	5035	1	Genic_Genomic	ENSMUSG00000003929.12	novel	NA	NA	NA	NA	24651	159	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAATAGTCCCCTTG	NA	False	NA	NA	False	NA	NA	NA	33553191	33548156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_33548200_33553200
ES.14960.10	chr17	-	4012	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	4	2623	0	2408	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGTGTATTTTGTAC	NA	False	NA	-4	True	TATAAA	-17	NA	33577848	33550938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.11	chr17	-	4146	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	2	-3336	2	2399	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCAAACCATGTGT	NA	False	NA	-13	True	TATAAA	-8	NA	33577840	33550947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
ES.14960.12	chr17	-	3482	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	-2	3159	-2	1872	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACTTGTTTTAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	33577854	33551474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.13	chr17	-	3611	6	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	14	1871	multi-exon	FALSE	canonical	0	0	junction_3	17.5430898076707	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTACTTGTTTTAAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	33613565	33551475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33605395_33605442_33605658_33605786_33613461
ES.14960.14	chr17	-	3632	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	-12	-2808	-2	1871	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTACTTGTTTTAAATG	NA	False	NA	NA	False	ATTAAA	-17	NA	33577854	33551475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
ES.14960.15	chr17	-	3720	7	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	11	1826	multi-exon	FALSE	canonical	2	3	junction_4	18.1421853393931	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATGTTGGTGTTATTC	NA	False	NA	NA	False	AATAAA	-32	NA	33613568	33551520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33605395_33605442_33605658_33605786_33613461
ES.14960.16	chr17	-	3328	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	29	3282	19	1749	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTGGTCAAAAATAAGT	NA	False	NA	NA	False	ATTAAA	-28	NA	33577823	33551597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.17	chr17	-	2600	7	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	7	684	multi-exon	FALSE	canonical	2	3	junction_4	18.1421853393931	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGCCTGTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	33613590	33552662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33605395_33605442_33605658_33605786_33613461
ES.14960.18	chr17	-	2465	6	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	7	682	multi-exon	FALSE	canonical	0	0	junction_3	17.5430898076707	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACCTGCCTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33613608	33552664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33605395_33605442_33605658_33605786_33613461
ES.14960.19	chr17	-	3577	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	25	-943	7	943	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTCCTTTTATCTT	NA	False	NA	NA	False	AATAAA	-16	NA	33613590	33598285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ES.14960.2	chr17	-	6622	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	17	0	7	0	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTGGTTGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	33577835	33548315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.20	chr17	-	2690	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	20	-51	2	51	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	33613595	33599177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ES.14960.21	chr17	-	4385	4	NNC	ENSMUSG00000055240.18	novel	353	4	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	22.0151463012778	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGACTGATTTTTGCTT	NA	False	NA	NA	False	AATAAA	-33	NA	33613608	33599230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33601940_33604039_33605442_33605658_33605786_33613461
ES.14960.22	chr17	-	3533	4	NNC	ENSMUSG00000055240.18	novel	6095	3	NA	NA	6	-14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.0151463012778	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCATTCCCACACAAGAC	NA	False	NA	NA	False	AATAAA	-21	NA	33613573	33599242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33601952_33604856_33605442_33605658_33605786_33613461
ES.14960.23	chr17	-	1727	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	24	908	6	-527	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCGTAACAGTCATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	33613591	33600136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ES.14960.3	chr17	-	6947	7	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	7	0	multi-exon	FALSE	canonical	2	3	junction_4	18.1421853393931	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTGGTTGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	33613590	33548315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33605395_33605442_33605658_33605786_33613461
ES.14960.4	chr17	-	5185	5	NNC	ENSMUSG00000003929.12	novel	812	5	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.182226450689	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTGTTGGTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	33577812	33548318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33550548_33551958_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.5	chr17	-	4978	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	41	-4207	41	-1761	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGCTCTTTGCCTA	NA	False	NA	NA	False	AATAAA	-23	NA	33577801	33550076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
ES.14960.6	chr17	-	4869	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	4	1766	0	-1766	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATTTGGAGCTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	33577848	33550081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.7	chr17	-	4665	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	12	1962	2	-1962	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGCACCTTGTCTCCT	NA	False	NA	NA	False	TTTAAA	-25	NA	33577840	33550277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ES.14960.8	chr17	-	4703	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	21	-3912	21	-2056	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTGTAAATAGGAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	33577821	33550371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
ES.14960.9	chr17	-	4297	7	Fusion	ENSMUSG00000003929.12_ENSMUSG00000055240.18	novel	812	5	NA	NA	19	2411	multi-exon	FALSE	canonical	2	3	junction_4	18.1421853393931	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGTATTTTGTACTAG	NA	False	NA	-1	True	TATAAA	-20	NA	33613560	33550935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33605395_33605442_33605658_33605786_33613461
ES.14961.1	chr17	-	174	1	Intergenic	novelGene_12512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTACTAGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	33621014	33620840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33620800_33621000
ES.14962.1	chr17	+	179	1	Intergenic	novelGene_12513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATATATCACCTAC	NA	False	NA	NA	False	NA	NA	NA	33733779	33733958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33733800_33734000
ES.14963.1	chr17	+	4514	24	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	-399	0	intron_retention	TRUE	canonical	2	3	junction_10	8.25468876326963	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	False	NA	2	True	AATAAA	-15	NA	33742778	33772741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756065_33756150_33756252_33756399_33756873_33756918_33757041_33757385_33757544_33757670_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.10	chr17	+	3932	24	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_3	7.95046098460176	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	False	NA	2	True	AATAAA	-15	NA	33743173	33772741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33747803_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756399_33756873_33756918_33757041_33757385_33757544_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.11	chr17	+	4130	24	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	-4	0	intron_retention	FALSE	canonical	3	10	junction_10	6.29309340266527	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	False	NA	2	True	AATAAA	-15	NA	33743173	33772741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756399_33756873_33756918_33757041_33757385_33757544_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.12	chr17	+	5243	23	NNC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_17	8.88459061596105	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCTCCTGACCGGGT	NA	False	NA	4	True	AATAAA	-17	NA	33743178	33772743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33743233_33747257_33747445_33747653_33749264_33750553_33750772_33756060_33756150_33756252_33756399_33756873_33756918_33757041_33757385_33757544_33757670_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768216_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.13	chr17	+	3845	24	NIC	ENSMUSG00000024299.18	novel	4043	25	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	8.88447170230799	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCTCCTGACCGGGT	NA	False	NA	4	True	AATAAA	-17	NA	33743178	33772743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747653_33748001_33749106_33749264_33750553_33750772_33756065_33756150_33756252_33756399_33756873_33756918_33757041_33757148_33757237_33757385_33757544_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.14	chr17	+	3974	23	NNC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	10.1663844065049	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGCTCCTGACCG	NA	False	NA	1	True	AATAAA	-14	NA	33743184	33772740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33743233_33747653_33747803_33749106_33749264_33749354_33749436_33750553_33750772_33756060_33756150_33756252_33756399_33756873_33756918_33757041_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.15	chr17	+	5631	24	NIC	ENSMUSG00000024299.18	novel	4009	25	NA	NA	-1679	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	7.24379664209733	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTGCTCCTGACCGGG	NA	False	NA	3	True	AATAAA	-16	NA	33745608	33772742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756399_33756873_33756918_33757041_33757148_33757237_33757385_33757544_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.16	chr17	+	2912	1	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	730	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACGAGTGATGGGCAGAA	NA	False	NA	NA	False	AATAAA	-39	NA	33748017	33750929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33748000_33750900
ES.14963.17	chr17	+	5962	15	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	22	0	intron_retention	FALSE	canonical	2	3	junction_5	7.40380486848568	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTGCTCCTGACCGGG	NA	False	NA	3	True	AATAAA	-16	NA	33750736	33772742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33750772_33756060_33756150_33756252_33756918_33757041_33757385_33757544_33757670_33762171_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.18	chr17	+	3189	15	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	382	0	intron_retention	FALSE	canonical	2	3	junction_2	6.90939909965891	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGGTGTGTGTCTCTGTA	NA	False	NA	17	True	AATAAA	-30	NA	33757074	33772756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33757385_33757544_33757670_33762171_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.2	chr17	+	4214	25	FSM	ENSMUSG00000024299.18	ENSMUST00000087623.13	4043	25	-172	1	-172	0	multi-exon	FALSE	canonical	2	2	junction_9	8.74483974822994	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	False	NA	2	True	AATAAA	-15	NA	33743005	33772741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756065_33756150_33756252_33756399_33756873_33756918_33757041_33757148_33757237_33757385_33757544_33757687_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.3	chr17	+	5650	22	NIC	ENSMUSG00000024299.18	novel	4009	25	NA	NA	-169	2	intron_retention	FALSE	canonical	2	4	junction_18	7.86478704628719	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGTGTGTCTCTGTATA	NA	False	NA	19	True	AATAAA	-32	NA	33743008	33772758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756918_33757041_33757385_33757544_33757687_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768457_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.4	chr17	+	4588	22	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	-166	5	intron_retention	FALSE	canonical	2	2	junction_1	7.11359083748669	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGACCGGGTGTGTGT	NA	False	NA	10	True	AATAAA	-23	NA	33743011	33772749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756918_33757041_33757385_33757544_33757676_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.5	chr17	+	2600	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	-68	1	-62	-1	multi-exon	FALSE	canonical	3	35	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAAGTCCGGC	NA	False	NA	NA	False	NA	NA	NA	33743115	33749949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33743233_33747257_33747445_33747653
ES.14963.6	chr17	+	6097	19	NIC	ENSMUSG00000024299.18	novel	4009	25	NA	NA	-60	0	intron_retention	FALSE	canonical	3	10	junction_8	6.72933507987854	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	False	NA	2	True	AATAAA	-15	NA	33743117	33772741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756252_33756918_33757041_33757676_33762171_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.7	chr17	+	5184	21	NIC	ENSMUSG00000024299.18	novel	4121	24	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_6	9.30644937664199	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTGCTCCTGACCGGG	NA	False	NA	3	True	AATAAA	-16	NA	33743154	33772742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756060_33756150_33756873_33756918_33757041_33757385_33757544_33757670_33762171_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33769645_33769987_33770165_33770241_33770405_33772058
ES.14963.8	chr17	+	743	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	-23	1813	-17	-1813	multi-exon	FALSE	canonical	3	35	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAGGCTGAAAGCAATG	NA	False	NA	NA	False	ATTAAA	-18	NA	33743160	33748137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33743233_33747257_33747445_33747653
ES.14963.9	chr17	+	1128	5	FSM	ENSMUSG00000024299.18	ENSMUST00000174170.3	1798	5	-28	698	-10	-4	multi-exon	FALSE	canonical	3	25	junction_4	5.3851648071345	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCACGAGTGATGGGC	NA	False	NA	NA	False	AATAAA	-35	NA	33743167	33750925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553
ES.14964.1	chr17	+	2393	16	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	3008	6	3008	0	3prime_fragment	FALSE	canonical	1	1	junction_1	23.8854674552447	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAGAAGTAAATTAC	NA	False	NA	NA	False	AATAAA	-13	NA	33804584	33826732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33804654_33805089_33805258_33807076_33807163_33809801_33809884_33811894_33812002_33812994_33813094_33813196_33813342_33816914_33817030_33817116_33817287_33820024_33820171_33820632_33820780_33820915_33821065_33821499_33821584_33823230_33823427_33823523_33823694_33826272
ES.14964.2	chr17	+	177	1	Intergenic	novelGene_12514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGCAACCCCAGC	NA	False	NA	NA	False	NA	NA	NA	33805975	33806152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33806000_33806200
ES.14964.3	chr17	+	188	1	Intergenic	novelGene_12515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATGAGCCTAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	33810025	33810213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33810000_33810200
ES.14964.4	chr17	+	179	1	Intergenic	novelGene_12516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATGTATTATGA	5257	False	NA	NA	False	NA	NA	NA	33815779	33815958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33815800_33816000
ES.14964.5	chr17	+	1223	4	ISM	ENSMUSG00000024300.18	ENSMUST00000173426.2	3667	18	19610	6	4072	0	3prime_fragment	FALSE	canonical	3	62	junction_3	1.69967317119759	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAGAAGTAAATTAC	3336	False	NA	NA	False	AATAAA	-13	NA	33821186	33826732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33821584_33823230_33823427_33823523_33823694_33826272
ES.14965.1	chr17	+	1128	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	2	67	2	-4	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4919	False	NA	25	True	AATACA	-15	NA	33848065	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.10	chr17	+	1629	6	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	10	junction_1	164.259063676864	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4927	False	NA	25	True	AATACA	-15	NA	33848073	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848673_33848743_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.11	chr17	+	2147	4	NIC	ENSMUSG00000073423.11	novel	1544	5	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	400	junction_2	20.4341761653255	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4927	False	NA	25	True	AATACA	-15	NA	33848073	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33849054_33849340_33849449_33849549_33850438_33850515
ES.14965.12	chr17	+	2125	4	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	63	junction_1	171.864934048675	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4929	False	NA	25	True	AATACA	-15	NA	33848075	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848673_33848770_33849054_33849340_33849449_33849549
ES.14965.13	chr17	+	1796	4	NIC	ENSMUSG00000073423.11	novel	1197	6	NA	NA	4	-4	intron_retention	FALSE	canonical	3	399	junction_2	20.8326666559997	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4932	False	NA	25	True	AATACA	-15	NA	33848078	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33849054_33849340_33849656_33850102_33850438_33850515
ES.14965.14	chr17	+	1605	6	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	11	-5	intron_retention	FALSE	canonical	3	63	junction_2	172.265608871881	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTGGTACCTATG	4965	False	NA	24	True	AATACA	-14	NA	33848111	33850685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33850438_33850515
ES.14965.2	chr17	+	1232	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	176.614143135694	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4919	False	NA	25	True	AATACA	-15	NA	33848065	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848191_33848595_33848673_33848743_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.3	chr17	+	1656	4	ISM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	-9	-25	2	-1	intron_retention	FALSE	canonical	3	354	junction_1	39.2031744746377	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTACCTATGCCTT	4919	False	NA	28	True	AATACA	-18	NA	33848065	33850689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549
ES.14965.4	chr17	+	3611	14	NNC	ENSMUSG00000092412.2	novel	2860	10	NA	NA	-1667	1	intron_retention	FALSE	canonical	0	0	junction_8	187.183421103726	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTCTTGTCTTTTC	4919	False	NA	NA	False	TATAAA	-17	NA	33848065	33864680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33850438_33850515_33850567_33859437_33860891_33860963_33861031_33861103_33861181_33863664_33863723_33863822_33863929_33864045_33864209_33864286_33864321_33864399_33864435_33864517
ES.14965.5	chr17	+	1706	5	NIC	ENSMUSG00000073423.11	novel	1197	6	NA	NA	3	-5	intron_retention	FALSE	canonical	3	399	junction_3	20.820662813657	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTGGTACCTATG	4920	False	NA	24	True	AATACA	-14	NA	33848066	33850685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.6	chr17	+	1204	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	3	4	3	-4	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4920	False	NA	25	True	AATACA	-15	NA	33848066	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.7	chr17	+	1205	5	ISM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	3	67	3	-4	intron_retention	FALSE	canonical	3	354	junction_1	33.9659756226728	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4920	False	NA	25	True	AATACA	-15	NA	33848066	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102
ES.14965.8	chr17	+	1141	6	NIC	ENSMUSG00000073423.11	novel	1197	6	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	165.848846845554	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGGTACCTATGC	4922	False	NA	25	True	AATACA	-15	NA	33848068	33850686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848191_33848754_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14965.9	chr17	+	1217	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	175.009206107057	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTGGTACCTATG	4922	False	NA	24	True	AATACA	-14	NA	33848068	33850685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_33848191_33848595_33848673_33848754_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ES.14966.1	chr17	+	188	1	Intergenic	novelGene_12517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATCACTGATTACTCA	NA	False	NA	NA	False	NA	NA	NA	33875868	33876056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33875900_33876100
ES.14967.1	chr17	-	1061	3	NNC	ENSMUSG00000059208.16	novel	1130	2	NA	NA	-684	97565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	972.5	1271	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTCTCTCTGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	33869345	33767641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33767874_33867786_33867839_33868568
ES.14967.11	chr17	-	5338	22	Fusion	ENSMUSG00000059208.16_ENSMUSG00000079557.12	novel	2370	17	NA	NA	-26	0	multi-exon	FALSE	non_canonical	0	0	junction_13	800.045035580445	1395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	2650	False	NA	-2	True	AATAAA	-19	NA	33937670	33865206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240_33905373_33906201_33907217_33910944_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.12	chr17	-	5729	2	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-2310	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	NA	False	NA	-2	True	AATAAA	-19	NA	33870971	33865206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33870776_33870811
ES.14967.16	chr17	-	2466	14	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_12	517.085002111146	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGCCTTTTTTGTTTT	5710	False	NA	-4	True	AATAAA	-17	NA	33904423	33865208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.17	chr17	-	5043	14	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	676.585247868394	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGCCTTTTTTGTTTT	5756	False	NA	-4	True	AATAAA	-17	NA	33904377	33865208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33870776_33870811_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889047_33889108_33896247_33896415_33904240
ES.14967.18	chr17	-	5240	14	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	500.263717435363	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5756	False	NA	-5	True	AATAAA	-16	NA	33904377	33865209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.19	chr17	-	2493	14	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	768.747517434775	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5769	False	NA	-5	True	AATAAA	-16	NA	33904364	33865209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865720_33867786_33867839_33868568_33869372_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.21	chr17	-	4713	13	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	536.826554857339	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5767	False	NA	-5	True	AATAAA	-16	NA	33904366	33865209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33888053_33896235_33896415_33904240
ES.14967.22	chr17	-	5185	13	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	516.106329214781	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5756	False	NA	-5	True	AATAAA	-16	NA	33904377	33865209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.23	chr17	-	2426	16	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	722.139918729205	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5769	False	NA	-5	True	AATAAA	-16	NA	33904364	33865209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865720_33867786_33867839_33868572_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.26	chr17	-	2305	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	663.597631344877	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5769	False	NA	-8	True	AATAAA	-13	NA	33904364	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.27	chr17	-	2417	14	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	679.063896218853	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5756	False	NA	-8	True	AATAAA	-13	NA	33904377	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.28	chr17	-	2486	14	NNC	ENSMUSG00000059208.16	novel	2550	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	663.977685516543	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5772	False	NA	-8	True	AATAAA	-13	NA	33904361	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865720_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.3	chr17	-	2505	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_12	499.910221531663	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTTTTTGTTTTTGT	5729	False	NA	-1	True	AATAAA	-20	NA	33904404	33865205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.31	chr17	-	2384	13	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_11	702.675581062998	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5743	False	NA	-8	True	AATAAA	-13	NA	33904390	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.32	chr17	-	4921	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	654.052406937248	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5758	False	NA	-8	True	AATAAA	-13	NA	33904375	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33870776_33870811_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.33	chr17	-	5781	3	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-4523	0	intron_retention	TRUE	non_canonical	0	0	junction_2	1097	1267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	NA	False	NA	-8	True	AATAAA	-13	NA	33873184	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33870776_33870813
ES.14967.34	chr17	-	2455	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5764	False	NA	-8	True	AATAAA	-13	NA	33904369	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
ES.14967.35	chr17	-	3180	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-42	0	intron_retention	FALSE	non_canonical	0	0	junction_8	762.376497191111	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5698	False	NA	-8	True	AATAAA	-13	NA	33904435	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883904_33883993_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.39	chr17	-	2290	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	657.005808690503	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5766	False	NA	-8	True	AATAAA	-13	NA	33904367	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.4	chr17	-	2340	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	506.741088340234	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTTTTTGTTTTTGT	5722	False	NA	-1	True	AATAAA	-20	NA	33904411	33865205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.41	chr17	-	2288	14	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_12	517.085002111146	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5769	False	NA	-8	True	AATAAA	-13	NA	33904364	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896356_33896415_33904240
ES.14967.42	chr17	-	3922	4	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	670	0	intron_retention	FALSE	non_canonical	0	0	junction_2	931.038607625317	1267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	NA	False	NA	-8	True	AATAAA	-13	NA	33877385	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33870801_33870837_33871301_33877361
ES.14967.44	chr17	-	4369	14	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	521.902414420086	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5769	False	NA	-8	True	AATAAA	-13	NA	33904364	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.45	chr17	-	4846	11	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	582.810337931646	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5758	False	NA	-8	True	AATAAA	-13	NA	33904375	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.48	chr17	-	2392	16	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	639.700054713144	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5739	False	NA	-8	True	AATAAA	-13	NA	33904394	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867860_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.5	chr17	-	4636	14	NNC	ENSMUSG00000059208.16	novel	2550	16	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_11	499.676581791195	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTTTTTTGTTTTTGT	5751	False	NA	-1	True	AATAAA	-20	NA	33904382	33865205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.50	chr17	-	1486	14	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	678.028206286958	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5774	False	NA	-8	True	AATAAA	-13	NA	33904359	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867846_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.51	chr17	-	3191	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	669.853307882877	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5745	False	NA	-8	True	AATAAA	-13	NA	33904388	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33888142_33889108_33896247_33896415_33904240
ES.14967.52	chr17	-	2335	16	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	640.384849567473	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5769	False	NA	-8	True	AATAAA	-13	NA	33904364	33865212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869366_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.53	chr17	-	2346	16	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	491.668786436108	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGCTTGCCTTTTTT	5739	False	NA	-9	True	AATAAA	-12	NA	33904394	33865213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888037_33889054_33889108_33896247_33896415_33904240
ES.14967.55	chr17	-	5297	12	NNC	ENSMUSG00000059208.16	novel	2550	16	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_10	532.486324660468	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5756	False	NA	-10	True	AATAAA	-11	NA	33904377	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.56	chr17	-	2371	16	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	646.005490172749	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5755	False	NA	-10	True	AATAAA	-11	NA	33904378	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883627_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.58	chr17	-	2450	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	659.810656204351	1277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5766	False	NA	-10	True	AATAAA	-11	NA	33904367	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868577_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.59	chr17	-	4492	15	NNC	ENSMUSG00000059208.16	novel	2428	17	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	489.036604990269	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5769	False	NA	-10	True	AATAAA	-11	NA	33904364	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.61	chr17	-	3495	22	Fusion	ENSMUSG00000059208.16_ENSMUSG00000079557.12	novel	2370	17	NA	NA	-6	-2	multi-exon	FALSE	non_canonical	0	0	junction_13	815.244172763283	1395	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	2683	False	NA	-10	True	AATAAA	-11	NA	33937637	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240_33904370_33906201_33906309_33906924_33907217_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.62	chr17	-	3186	14	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	514.328861250069	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5769	False	NA	-10	True	AATAAA	-11	NA	33904364	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.63	chr17	-	2733	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	659.810656204351	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5769	False	NA	-10	True	AATAAA	-11	NA	33904364	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868291_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.65	chr17	-	2275	14	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	688.512606614763	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5758	False	NA	-10	True	AATAAA	-11	NA	33904375	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.67	chr17	-	4762	24	Fusion	ENSMUSG00000059208.16_ENSMUSG00000079557.12	novel	2370	17	NA	NA	-4	-2	multi-exon	FALSE	non_canonical	0	0	junction_13	842.239861842888	1395	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	2685	False	NA	-10	True	AATAAA	-11	NA	33937635	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240_33905373_33906201_33906309_33906488_33906572_33906924_33907217_33910944_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.68	chr17	-	3069	15	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	503.806632001783	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTGGCTTGCCTTTTT	5769	False	NA	-10	True	AATAAA	-11	NA	33904364	33865214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.69	chr17	-	2311	15	NNC	ENSMUSG00000059208.16	novel	3934	16	NA	NA	-1	60	intron_retention	FALSE	non_canonical	0	0	junction_12	499.910221531663	1274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCAGTTGCTTTTT	5755	False	NA	-103	True	TATAAA	-8	NA	33904378	33865373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240
ES.14967.7	chr17	-	3660	20	Fusion	ENSMUSG00000059208.16_ENSMUSG00000079557.12	novel	2370	17	NA	NA	-4	0	multi-exon	TRUE	non_canonical	0	0	junction_2	855.197474400858	1395	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	2672	False	NA	-2	True	AATAAA	-19	NA	33937648	33865206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_33865634_33867786_33867839_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889046_33889108_33896247_33896415_33904240_33905373_33906201_33906309_33906924_33907217_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.70	chr17	-	2980	3	NNC	ENSMUSG00000059208.16	novel	735	4	NA	NA	-2	191	intron_retention	FALSE	canonical	0	0	junction_1	1047	1122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGAAAAATGTACAAAACA	5769	False	NA	NA	False	AATAAA	-12	NA	33904364	33885369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33888053_33896241_33896415_33904240
ES.14967.71	chr17	-	175	1	Intergenic	novelGene_12518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1092	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	33891474	33891299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33891300_33891500
ES.14967.72	chr17	-	176	1	Intergenic	novelGene_12519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1060	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAAAATGGTCAGAA	5711	False	NA	NA	False	NA	NA	NA	33898347	33898171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_33898200_33898300
ES.14967.73	chr17	-	2973	1	NIC	ENSMUSG00000079557.12	novel	2481	6	NA	NA	13798	-618	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATTTTTATATTTTT	1756	False	NA	NA	False	AATAAA	-14	NA	33908377	33905404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33905400_33908400
ES.14967.74	chr17	-	3314	5	NNC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-6	1921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.538683998045	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCACCAAAAACCAAAACAAA	2683	False	NA	NA	False	NA	NA	NA	33937637	33908567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911128_33915010_33915221_33921986_33922185_33928718_33928947_33937519
ES.14967.76	chr17	-	3836	1	NIC	ENSMUSG00000079557.12	novel	3400	6	NA	NA	9738	1887	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	8048	False	NA	NA	False	NA	NA	NA	33912437	33908601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33908600_33912400
ES.14967.77	chr17	-	3136	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	9	-1747	-4	1747	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGCTGGGTATGGTGGC	2685	False	NA	NA	False	AATAAA	-19	NA	33937635	33908741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.78	chr17	-	1456	5	FSM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	-27	-11	3	11	multi-exon	FALSE	canonical	3	31	junction_1	109.184476918654	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTTCCAAGCGAGTGA	2679	False	NA	0	True	AATAAA	-44	NA	33937641	33910477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.79	chr17	-	1421	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	-14	-9	-14	9	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCTGTTCCAAGCGAGT	2662	False	NA	-2	True	AATAAA	-42	NA	33937658	33910479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.8	chr17	-	3125	14	NNC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	-74	0	intron_retention	FALSE	canonical	0	0	junction_12	519.991499702941	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	5666	False	NA	-2	True	AATAAA	-19	NA	33904467	33865206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896241_33896415_33904240
ES.14967.80	chr17	-	5294	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-27	-2701	-14	-1	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGTTTCTAAGCTGTT	2662	False	NA	-12	True	AATAAA	-32	NA	33937658	33910489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.81	chr17	-	1497	6	NNC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	128.813663871501	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGTTTCTAAGCTGTT	2683	False	NA	-12	True	AATAAA	-32	NA	33937637	33910489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911128_33915010_33915221_33921986_33922183_33922312_33922420_33928718_33928947_33937519
ES.14967.82	chr17	-	1516	6	NIC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	123.474045855799	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAGTTATGTTTCTAAG	2672	False	NA	-17	True	AATAAA	-27	NA	33937648	33910494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33934916_33935037_33937519
ES.14967.83	chr17	-	1175	4	NNC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	124.71924025141	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAGTTATGTTTCTAAG	2677	False	NA	-17	True	AATAAA	-27	NA	33937643	33910494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911128_33921986_33922177_33928718_33928947_33937519
ES.14967.84	chr17	-	1452	6	NNC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	128.020310888546	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCATCAGTTATGTTTCT	2670	False	NA	-20	True	AATAAA	-24	NA	33937650	33910497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33934916_33935041_33937586
ES.14967.85	chr17	-	1859	5	NNC	ENSMUSG00000079557.12	novel	1418	5	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	122.137217914934	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGACGCATCAGTTAT	2684	False	NA	-26	True	AATAAA	-18	NA	33937636	33910503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911612_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.86	chr17	-	1522	6	NIC	ENSMUSG00000079557.12	novel	1418	5	NA	NA	1	-15	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	129.97015041924	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGACGCATCAGTTAT	2707	False	NA	-26	True	AATAAA	-18	NA	33937613	33910503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33934916_33935037_33937519
ES.14967.87	chr17	-	1410	5	NNC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	-13	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.569113156619	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGACGCATCAGTTAT	2663	False	NA	-26	True	AATAAA	-18	NA	33937657	33910503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33911128_33914996_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.88	chr17	-	2626	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-27	-33	-14	33	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTGGAACTTATGCAGA	2662	False	NA	NA	False	ATTAAA	-22	NA	33937658	33913157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.89	chr17	-	2099	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-5	472	-5	-472	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGAAGTTCTTCCTTG	2684	False	NA	NA	False	NA	NA	NA	33937636	33913662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.9	chr17	-	3354	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1340	junction_11	204.417103102496	1277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTTTTGTTTTTG	5756	False	NA	-2	True	AATAAA	-19	NA	33904377	33865206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33889108_33896247_33896415_33904240
ES.14967.90	chr17	-	1453	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-33	1146	-20	663	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATGAGCCCTCAC	2656	False	NA	NA	False	AATAAA	-31	NA	33937664	33914336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
ES.14967.91	chr17	-	4933	1	NIC	ENSMUSG00000079557.12	novel	2481	6	NA	NA	-5	-10591	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2684	False	NA	NA	False	NA	NA	NA	33937636	33932703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33932700_33937600
ES.14968.1	chr17	+	162	1	Intergenic	novelGene_12520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAACAAACAAAC	238	False	NA	NA	False	NA	NA	NA	33940960	33941122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33941000_33941100
ES.14969.1	chr17	+	183	1	Intergenic	novelGene_12521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGGAG	3385	False	NA	NA	False	NA	NA	NA	33954908	33955091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33954900_33955100
ES.1497.1	chr1	+	190	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAGTAAATAAATCTT	2145	False	NA	NA	False	NA	NA	NA	136951844	136952034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_136951800_136952000
ES.14970.1	chr17	+	931	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	-6	0	-6	0	multi-exon	FALSE	canonical	3	20	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGATTTCATTTTC	3471	False	NA	19	True	NA	NA	NA	33978959	33980844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_33979562_33980515
ES.14970.2	chr17	+	1596	2	NNC	ENSMUSG00000090952.3	novel	925	2	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTACCTCTCTGA	3492	False	NA	9	True	NA	NA	NA	33978980	33980834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_33979744_33980001
ES.14971.1	chr17	-	6061	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	47	1	1	-1	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTCATGATGCTTC	NA	False	NA	NA	False	NA	NA	NA	33979457	33961458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.10	chr17	-	2119	5	NNC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	0	152	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	256.01892019927	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCAGCTTCTGTCTTC	NA	False	NA	-7	True	ACTAAA	-30	NA	33979458	33965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979026
ES.14971.11	chr17	-	1991	5	NNC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	-32	152	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	249.943368585766	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCAGCTTCTGTCTTC	NA	False	NA	-7	True	ACTAAA	-30	NA	33979312	33965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33966788_33967483_33967565_33967652_33968035_33968755_33968952_33979196
ES.14971.12	chr17	-	2546	4	NIC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	-55	151	intron_retention	FALSE	canonical	3	562	junction_1	11.5758369027902	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	-8	True	ACTAAA	-29	NA	33979335	33965572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33966788_33967483_33967565_33967840_33968952_33979196
ES.14971.13	chr17	-	1807	6	NNC	ENSMUSG00000077450.14	novel	6109	5	NA	NA	5	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	291.070850481459	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	-8	True	ACTAAA	-29	NA	33979249	33965572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33977974_33978043_33979196
ES.14971.15	chr17	-	1648	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-35	-69	-35	69	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCGAACTCTTATTCT	NA	False	NA	-2	True	NA	NA	NA	33979315	33965654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ES.14971.16	chr17	-	5013	4	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	6916	-65	-3545	65	3prime_fragment	FALSE	canonical	3	562	junction_1	29.3295452099452	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTCTCGAACTCTTA	6492	False	NA	-6	True	NA	NA	NA	33972364	33965658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755
ES.14971.17	chr17	-	1660	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	172	4277	-52	-11	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTCTTGTAGCCTTTG	NA	False	NA	-82	True	NA	NA	NA	33979332	33965734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.18	chr17	-	5734	4	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	5411	719	-5050	-55	3prime_fragment	FALSE	canonical	3	562	junction_1	29.3295452099452	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCGGCTTGCCCTGCAC	4987	False	NA	NA	False	NA	NA	NA	33973869	33966442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755
ES.14971.19	chr17	-	1064	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	59	4986	13	-56	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCCGGCTTGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	33979445	33966443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.2	chr17	-	5842	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-39	-4259	-39	-7	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCATTTTTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	33979319	33961464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ES.14971.20	chr17	-	894	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-70	720	-70	-56	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCCGGCTTGCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	33979350	33966443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ES.14971.3	chr17	-	5189	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	189	731	-35	-731	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTCTATGTCTGC	NA	False	NA	NA	False	NA	NA	NA	33979315	33962188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.4	chr17	-	4879	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	67	1163	21	-1163	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAAGGTCTGGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	33979437	33962620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.5	chr17	-	4465	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	253	1391	3	-1391	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTATATGTTGAGTT	NA	False	NA	NA	False	TATAAA	-21	NA	33979251	33962848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.6	chr17	-	2615	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	-3	-1068	-3	1068	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGACCCCAAAGAAGTT	NA	False	NA	NA	False	TTTAAA	-25	NA	33979283	33964655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ES.14971.7	chr17	-	2842	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	47	3220	1	1046	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	33979457	33964677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.8	chr17	-	2001	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	-6	4114	-6	152	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCAGCTTCTGTCTTC	NA	False	NA	-7	True	ACTAAA	-30	NA	33979510	33965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ES.14971.9	chr17	-	1911	5	FSM	ENSMUSG00000077450.14	ENSMUST00000235046.2	5822	5	-203	4114	14	152	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCAGCTTCTGTCTTC	NA	False	NA	-7	True	ACTAAA	-30	NA	33979240	33965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979016
ES.14972.1	chr17	+	217	1	Intergenic	novelGene_12522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACCAATATGCTACCCAG	NA	False	NA	NA	False	NA	NA	NA	33991995	33992212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_33992000_33992200
ES.14973.1	chr17	-	4786	3	NIC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	1	-7	intron_retention	FALSE	canonical	3	131	junction_1	0.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	34000516	33992730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33996390_33997345_33997460_33999503
ES.14973.2	chr17	-	2948	6	NIC	ENSMUSG00000002289.17	novel	3308	7	NA	NA	304	8	intron_retention	FALSE	canonical	3	131	junction_2	5.01996015920445	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTCTGTTGTTTCA	120	False	NA	-3	True	AATAAA	-16	NA	34000213	33993873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
ES.14973.3	chr17	-	1889	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	268	1151	-19	7	multi-exon	FALSE	canonical	3	124	junction_1	6.14862224856557	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTCTCTGTTGTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	34000536	33993874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
ES.14974.1	chr17	+	174	1	Intergenic	novelGene_12523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACACAGT	6218	False	NA	NA	False	NA	NA	NA	34005987	34006161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34006000_34006200
ES.14975.1	chr17	-	178	1	Intergenic	novelGene_12524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCCAAAGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	34014445	34014267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34014300_34014400
ES.14976.1	chr17	-	192	1	Intergenic	novelGene_12525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGTTAATCTCCCT	9755	False	NA	NA	False	NA	NA	NA	34018305	34018113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34018100_34018300
ES.14977.1	chr17	-	179	1	Intergenic	novelGene_12526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTC	8767	False	NA	NA	False	NA	NA	NA	34019293	34019114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34019100_34019300
ES.14978.1	chr17	-	134	1	Intergenic	novelGene_12527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8861	False	NA	NA	False	NA	NA	NA	34023192	34023058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34023100_34023200
ES.14979.1	chr17	+	4444	8	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	-24	3	intron_retention	FALSE	canonical	2	20	junction_5	113.70997838217	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTGTGGATGGAAGCA	NA	False	NA	16	True	AATAAA	-19	NA	34029468	34041895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040814_34040889_34040979_34041181_34041259
ES.14979.10	chr17	+	3030	9	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_2	52.3078328264515	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029493	34041891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34041181_34041259
ES.14979.11	chr17	+	2900	10	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	100.657590957086	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041292
ES.14979.12	chr17	+	3961	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	37.8153408023781	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979
ES.14979.13	chr17	+	780	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	3	0	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.14	chr17	+	3785	10	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	22	junction_2	100.651212941855	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34037070_34037166_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.15	chr17	+	2653	11	FSM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	0	-1	0	1	multi-exon	FALSE	canonical	3	16	junction_2	101.139952541021	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.16	chr17	+	4482	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	46.1408668301402	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.17	chr17	+	4562	7	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	238	junction_1	49.5143076965302	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.18	chr17	+	4538	2	ISM	ENSMUSG00000042099.17	ENSMUST00000173958.2	487	3	-6	1478	0	-1275	5prime_fragment	FALSE	canonical	3	238	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCTGTTTCCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	34029496	34039654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34029540_34035159
ES.14979.19	chr17	+	4186	5	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	-1278	intron_retention	FALSE	canonical	3	238	junction_1	27.9642629082191	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTTGCTGTTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34039651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065
ES.14979.2	chr17	+	3615	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	-23	2	intron_retention	FALSE	canonical	3	238	junction_1	47.8789626216817	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	NA	False	NA	15	True	AATAAA	-18	NA	34029469	34041894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.20	chr17	+	3635	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	16	junction_2	106.961751699056	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTATTGTGTGGATGGAAG	NA	False	NA	14	True	AATAAA	-17	NA	34029496	34041893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979
ES.14979.21	chr17	+	2713	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_2	51.9724523422662	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041350_34041648
ES.14979.22	chr17	+	3963	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	238	junction_1	49.5831604067184	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.23	chr17	+	3792	7	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	204	junction_2	53.7111616788251	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	NA	False	NA	15	True	AATAAA	-18	NA	34029496	34041894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037972_34038065_34038971_34040742_34040889_34040979
ES.14979.24	chr17	+	4458	8	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	120.672943047203	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34037419_34037522_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.25	chr17	+	3841	4	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	-1278	intron_retention	FALSE	canonical	3	238	junction_1	27.956315128349	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTTGCTGTTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	34029496	34039651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065_34038154_34038753
ES.14979.26	chr17	+	3534	9	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	204	junction_2	57.0608228121537	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029496	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.27	chr17	+	1638	1	NIC	ENSMUSG00000042099.17	novel	646	5	NA	NA	0	-9795	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCATTTGGGCGTAGTG	NA	False	NA	NA	False	GGGGCT	-31	NA	34029496	34031134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029500_34031100
ES.14979.28	chr17	+	6678	3	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	238	junction_1	34	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065
ES.14979.29	chr17	+	2582	11	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	0	intron_retention	FALSE	canonical	2	16	junction_2	128.077515591145	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029497	34041891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040814_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.3	chr17	+	3901	9	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	238	junction_1	46.4433458635357	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTATTGTGTGGATGG	NA	False	NA	11	True	AATAAA	-14	NA	34029478	34041890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.30	chr17	+	3234	10	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	204	junction_2	58.0327706484517	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.31	chr17	+	4824	5	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	238	junction_1	53.877175130105	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	False	NA	7	True	AATAAA	-10	NA	34029497	34041886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065_34038971_34040742_34041181_34041259
ES.14979.32	chr17	+	3551	9	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	16	junction_2	108.457076763114	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.33	chr17	+	3242	6	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	4	2236	1	-1273	intron_retention	FALSE	canonical	3	204	junction_2	41.2485151247896	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTTCCTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	34029497	34039656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065
ES.14979.34	chr17	+	4305	5	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	238	junction_1	31.4434015335491	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029497	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065_34038154_34038753_34038971_34040742
ES.14979.35	chr17	+	2608	11	NNC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	8	junction_9	99.6233406386275	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041155_34041259_34041350_34041648
ES.14979.36	chr17	+	2733	12	NNC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	1	1	intron_retention	FALSE	canonical	2	2	junction_3	128.881199700979	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34035220_34035321_34035421_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.37	chr17	+	2573	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	109.894674603335	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029497	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.38	chr17	+	3572	10	NNC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	109.894674603335	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029497	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029524_34035153_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.39	chr17	+	3785	6	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	204	junction_2	43.4695295580709	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029498	34041891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037600_34037773_34037972_34038065_34038971_34040742
ES.14979.4	chr17	+	783	6	NNC	ENSMUSG00000042099.17	novel	783	6	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.179138953277	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029488	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34029540_34035159_34035220_34040742_34040883_34040979_34041181_34041259_34041350_34041648
ES.14979.40	chr17	+	4793	8	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	-2	1	intron_retention	FALSE	canonical	3	204	junction_2	54.9140330007564	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029500	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34041181_34041259
ES.14979.41	chr17	+	4209	6	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	238	junction_1	44.665870639673	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029503	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979
ES.14979.42	chr17	+	3334	6	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	14	-2	intron_retention	FALSE	canonical	3	204	junction_2	41.7822929002227	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTAAGTTCGTATTGTGT	NA	False	NA	5	True	AATAAA	-8	NA	34029516	34041884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037972_34038065_34038154_34038753_34038971_34040742
ES.14979.43	chr17	+	3257	7	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	204	junction_2	40.7120648238605	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029516	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037972_34038065_34038154_34038753_34038971_34040742
ES.14979.44	chr17	+	5285	8	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	15	1	intron_retention	FALSE	canonical	3	204	junction_2	60.76518874541	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029517	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34040889_34040979_34041181_34041259
ES.14979.45	chr17	+	2598	10	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	5661	2	-1726	-1	3prime_fragment	FALSE	canonical	3	204	junction_1	54.8191189501358	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTATTGTGTGGATGG	2793	False	NA	11	True	AATAAA	-14	NA	34035154	34041890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.46	chr17	+	5208	1	Genic_Genomic	ENSMUSG00000042099.17	novel	NA	NA	NA	NA	-194	2	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	4325	False	NA	15	True	AATAAA	-18	NA	34036686	34041894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_34036700_34041900
ES.14979.47	chr17	+	2858	2	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	7217	2236	-167	-1277	intron_retention	FALSE	canonical	3	304	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGCTGTTTCCTGAG	4352	False	NA	NA	False	NA	NA	NA	34036713	34039652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34037419_34037499
ES.14979.48	chr17	+	2574	4	NNC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	-119	0	intron_retention	FALSE	canonical	0	0	junction_3	143.780697205462	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	4400	False	NA	9	True	AATAAA	-12	NA	34036761	34041888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34037419_34037499_34037972_34038065_34038365_34040742
ES.14979.5	chr17	+	2941	10	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	-4	3	-3	1	intron_retention	FALSE	canonical	3	204	junction_2	55.0900497390129	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029489	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.50	chr17	+	1831	1	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	-111	-2329	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACCGGCTCCACCTGGTT	4408	False	NA	NA	False	NA	NA	NA	34036769	34038600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34036800_34038600
ES.14979.51	chr17	+	4636	5	NIC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	-74	-4	intron_retention	FALSE	canonical	3	296	junction_2	28.8227340826647	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTAAGTTCGTATTGT	4445	False	NA	3	True	AATAAA	-6	NA	34036806	34041882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34040889_34040979
ES.14979.52	chr17	+	1764	10	NNC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	103.455602692145	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4477	False	NA	10	True	AATAAA	-13	NA	34036838	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34037070_34037166_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.53	chr17	+	2835	6	NIC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	-26	1	intron_retention	FALSE	canonical	3	296	junction_2	34.3953485227291	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4493	False	NA	10	True	AATAAA	-13	NA	34036854	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34041181_34041259
ES.14979.54	chr17	+	2916	6	NIC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	-24	1	intron_retention	FALSE	canonical	3	304	junction_1	35.3858728873544	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4495	False	NA	10	True	AATAAA	-13	NA	34036856	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34037419_34037499_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
ES.14979.55	chr17	+	4942	2	FSM	ENSMUSG00000042099.17	ENSMUST00000173649.2	355	2	-3947	-640	-24	1	multi-exon	FALSE	canonical	3	368	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4495	False	NA	10	True	AATAAA	-13	NA	34036856	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34040889_34040979
ES.14979.56	chr17	+	2108	6	ISM	ENSMUSG00000042099.17	ENSMUST00000234357.2	1640	10	180	2	180	1	intron_retention	FALSE	canonical	3	265	junction_4	17.4080441175912	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4699	False	NA	10	True	AATAAA	-13	NA	34037060	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742
ES.14979.57	chr17	+	4532	3	NIC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	304	1	intron_retention	FALSE	canonical	3	306	junction_1	42	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	4823	False	NA	10	True	AATAAA	-13	NA	34037184	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34037972_34038065_34041181_34041259
ES.14979.58	chr17	+	2022	6	NIC	ENSMUSG00000042099.17	novel	1640	10	NA	NA	652	1	intron_retention	FALSE	canonical	3	306	junction_1	33.1638357250786	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	5171	False	NA	10	True	AATAAA	-13	NA	34037532	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.6	chr17	+	2645	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	-2	-2	-1	2	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTGTGTGGATGGAAGC	NA	False	NA	15	True	AATAAA	-18	NA	34029491	34041894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ES.14979.7	chr17	+	4568	7	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	238	junction_1	37.9941515967334	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029491	34041891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979
ES.14979.8	chr17	+	4446	3	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	-1277	intron_retention	FALSE	canonical	3	238	junction_1	34	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGCTGTTTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	34029492	34039652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34037972_34038065
ES.14979.9	chr17	+	3616	8	NIC	ENSMUSG00000042099.17	novel	2641	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	204	junction_2	49.7815636720328	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTATTGTGTGGATG	NA	False	NA	10	True	AATAAA	-13	NA	34029493	34041889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979
ES.1498.1	chr1	-	182	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAACGCATAAAA	NA	False	NA	NA	False	NA	NA	NA	137146153	137145971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_137146000_137146200
ES.14980.1	chr17	-	3896	1	Genic_Genomic	ENSMUSG00000067288.14	novel	NA	NA	NA	NA	4936	3512	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	34038384	34034488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34034500_34038400
ES.14981.10	chr17	-	298	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9511.41925383495	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAATTCTTGTCTAGAA	NA	False	NA	-32	True	AATAAA	-7	NA	34043469	34042030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34042091_34042170_34042305_34043272_34043321_34043413
ES.14981.2	chr17	-	330	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	63	-11	-5	-2	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGTTTTTCCAGCAGC	NA	False	NA	-14	True	AATAAA	-25	NA	34043473	34042012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ES.14981.4	chr17	-	1357	2	FSM	ENSMUSG00000067288.14	ENSMUST00000174788.2	812	2	-11	-534	-1	0	multi-exon	FALSE	canonical	3	16929	junction_1	0	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043469	34042025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34043321_34043407
ES.14981.5	chr17	-	310	4	NNC	ENSMUSG00000067288.14	novel	271	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9430.63816622302	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043469	34042025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34042084_34042162_34042305_34043272_34043321_34043407
ES.14981.7	chr17	-	389	3	ISM	ENSMUSG00000067288.14	ENSMUST00000173019.8	437	4	-3	4025	-1	0	5prime_fragment	FALSE	canonical	3	16929	junction_2	2573.5	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043469	34042025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34042305_34043272_34043321_34043407
ES.14981.9	chr17	-	1442	1	FSM	ENSMUSG00000067288.14	ENSMUST00000234017.2	1443	1	-1	2	-1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCTTGTCTAGAAATT	NA	False	NA	-29	True	AATAAA	-10	NA	34043469	34042027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34042000_34043500
ES.14982.1	chr17	+	470	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	-33	1	-1	-1	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4073	False	NA	24	True	AATATA	-15	NA	34043544	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34043655_34048640_34048791_34057072
ES.14982.11	chr17	+	525	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	3843.12826859694	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	4118	False	NA	30	True	AATATA	-21	NA	34043589	34057288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043699_34044574_34044625_34048640_34048791_34057072
ES.14982.12	chr17	+	1227	1	NIC	ENSMUSG00000041881.14	novel	528	4	NA	NA	4	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCTGTTCTCTTGAA	4119	False	NA	8	True	NA	NA	NA	34043590	34044817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34043600_34044800
ES.14982.13	chr17	+	561	3	NIC	ENSMUSG00000041881.14	novel	438	3	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	4347.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4119	False	NA	24	True	AATATA	-15	NA	34043590	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34043792_34048640_34048791_34057072
ES.14982.14	chr17	+	978	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3967.30725919847	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4119	False	NA	24	True	AATATA	-15	NA	34043590	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043655_34044574_34045053_34048564_34048791_34057072
ES.14982.15	chr17	+	452	4	NNC	ENSMUSG00000041881.14	novel	368	3	NA	NA	-138	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	3837.05497600554	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4409	False	NA	24	True	AATATA	-15	NA	34043880	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043923_34044574_34044625_34048640_34048791_34057072
ES.14982.16	chr17	+	850	4	NNC	ENSMUSG00000041881.14	novel	371	4	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3846.39857529092	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	4441	False	NA	30	True	AATATA	-21	NA	34043912	34057288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34044347_34044574_34044625_34048640_34048791_34057072
ES.14982.2	chr17	+	522	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	3	3	3	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	4077	False	NA	30	True	AATATA	-21	NA	34043548	34057288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ES.14982.3	chr17	+	495	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3846.39857529092	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4091	False	NA	24	True	AATATA	-15	NA	34043562	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043648_34044574_34044625_34048640_34048791_34057072
ES.14982.4	chr17	+	4516	3	NIC	ENSMUSG00000041881.14	novel	438	3	NA	NA	-2	0	intron_retention	FALSE	canonical	3	8081	junction_1	317	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4094	False	NA	25	True	AATATA	-16	NA	34043565	34057283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34043655_34044574_34048791_34057072
ES.14982.6	chr17	+	323	2	FSM	ENSMUSG00000041881.14	ENSMUST00000173182.2	610	2	7	280	-3	-3	multi-exon	FALSE	canonical	3	8081	junction_1	0	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCTGTTCTCTTGAA	4103	False	NA	8	True	NA	NA	NA	34043574	34044817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34043655_34044574
ES.14982.7	chr17	+	345	2	NNC	ENSMUSG00000041881.14	novel	419	2	NA	NA	-3	-16	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAACCCTAAATTTG	4112	False	NA	-5	True	NA	NA	NA	34043583	34044804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043699_34044574
ES.14982.8	chr17	+	542	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	3940.96522299917	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAATCTGTCTTTTCT	4118	False	NA	24	True	AATATA	-15	NA	34043589	34057282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34043655_34044574_34044692_34048640_34048791_34057072
ES.14983.1	chr17	+	1202	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	-13	1020	-13	1	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTCTAGCCTGTTTC	6980	False	NA	24	True	ATTAAA	-17	NA	34062051	34067728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ES.14983.2	chr17	+	1480	4	FSM	ENSMUSG00000002308.17	ENSMUST00000234506.2	1417	4	-63	0	-1	0	multi-exon	FALSE	canonical	3	328	junction_3	11.8977121983832	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	6992	False	NA	23	True	ATTAAA	-16	NA	34062063	34067727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34062266_34064989_34065116_34066468_34067153_34067259
ES.14983.4	chr17	+	2818	3	NIC	ENSMUSG00000002308.17	novel	1417	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	328	junction_2	10.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7007	False	NA	23	True	ATTAAA	-16	NA	34062078	34067727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34062266_34064989_34067153_34067259
ES.14983.6	chr17	+	2182	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	27	0	15	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCATGGAAACAGAATT	7020	False	NA	NA	False	NA	NA	NA	34062091	34068748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ES.14983.7	chr17	+	1451	2	FSM	ENSMUSG00000002308.17	ENSMUST00000173418.2	492	2	44	-1003	-6	1003	multi-exon	FALSE	canonical	3	349	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7049	False	NA	NA	False	NA	NA	NA	34062120	34066295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34062266_34064989
ES.14984.1	chr17	-	1539	1	Antisense	novelGene_ENSMUSG00000002308.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTATGACACTACCTCC	NA	False	NA	NA	False	NA	NA	NA	34062275	34060736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_34060700_34062300
ES.14985.1	chr17	+	180	1	Intergenic	novelGene_12528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAAAAGCATAT	NA	False	NA	NA	False	NA	NA	NA	34074663	34074843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34074700_34074800
ES.14986.1	chr17	+	3989	1	Intergenic	novelGene_12529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAATGGCCAGATGT	NA	False	NA	NA	False	NA	NA	NA	34086422	34090411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34086400_34090400
ES.14987.1	chr17	+	2074	1	Intergenic	novelGene_12530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTTTCTCTCCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	34090586	34092660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34090600_34092700
ES.14988.1	chr17	+	1006	4	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11963	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	55.6496980125579	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTCTGACTTAAATTT	NA	False	NA	15	True	NA	NA	NA	34112145	34125651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34112309_34122590_34122685_34124501_34124892_34125292
ES.14988.2	chr17	+	887	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11935	5	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGACTTAAATTTCTT	NA	False	NA	18	True	NA	NA	NA	34112173	34125654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34112309_34124501_34124892_34125292
ES.14988.3	chr17	+	798	3	FSM	ENSMUSG00000092349.2	ENSMUST00000172817.2	807	3	6	3	6	-3	multi-exon	FALSE	canonical	3	7	junction_1	58	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGGTGTTCTGACTTA	1265	False	NA	10	True	NA	NA	NA	34124114	34125646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34124169_34124501_34124892_34125292
ES.14989.1	chr17	-	2965	13	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-14962	-1	intron_retention	FALSE	canonical	0	0	junction_11	209.913656191196	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTGTTTTGCTTTTT	4809	False	NA	-8	True	AATAAA	-25	NA	34124597	34094633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451_34110059_34111589_34111718_34124539
ES.14989.11	chr17	-	4305	12	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_6	240.401936159198	390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9749	False	NA	-16	True	AATAAA	-17	NA	34109579	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104047_34104137_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34107193_34109117_34109451
ES.14989.12	chr17	-	2263	10	NIC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	11	0	intron_retention	FALSE	canonical	1	14	junction_2	169.7349422402	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9704	False	NA	-16	True	AATAAA	-17	NA	34109624	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094844_34100402_34100479_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.13	chr17	-	2776	10	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_2	173.029719847826	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9670	False	NA	-16	True	AATAAA	-17	NA	34109658	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100557_34100729_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.14	chr17	-	2381	11	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	192.223411685466	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9750	False	NA	-16	True	AATAAA	-17	NA	34109578	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104047_34104137_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.16	chr17	-	3049	10	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	202.260435949835	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9755	False	NA	-16	True	AATAAA	-17	NA	34109573	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104047_34104137_34104193_34104822_34105650_34105737_34105876_34109451
ES.14989.17	chr17	-	1373	1	NIC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	6185	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTTTTTCTTGTTTGTT	NA	False	NA	-17	True	AATAAA	-16	NA	34096015	34094642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094600_34096000
ES.14989.18	chr17	-	4659	10	NNC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	-2	-1	intron_retention	TRUE	non_canonical	0	0	junction_9	202.405594515957	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTTTTTCTTGTTTGTT	9748	False	NA	-17	True	AATAAA	-16	NA	34109580	34094642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104193_34104822_34104877_34105549_34105650_34105737_34106173_34107562
ES.14989.19	chr17	-	2289	11	NNC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_4	174.497249261987	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTTTTTCTTGTTTGTT	9749	False	NA	-17	True	AATAAA	-16	NA	34109579	34094642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101416_34102068_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.2	chr17	-	2951	10	NIC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	370	junction_6	100.144833388053	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTGTTTTGCTTTT	9748	False	NA	-9	True	AATAAA	-24	NA	34109580	34094634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.20	chr17	-	2363	12	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-14977	-2	intron_retention	FALSE	canonical	0	0	junction_11	218.042948229763	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTTTTTCTTGTTTGT	4794	False	NA	-18	True	AATAAA	-15	NA	34124612	34094643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34111589_34111718_34124539
ES.14989.21	chr17	-	3127	9	NIC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	370	junction_5	105.50118482747	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTTTTTCTTGTTTGT	9744	False	NA	-18	True	AATAAA	-15	NA	34109584	34094643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34102853_34103562_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.22	chr17	-	3572	8	NNC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	177.160713385747	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTTTTTCTTGTTTGT	9704	False	NA	-18	True	AATAAA	-15	NA	34109624	34094643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100557_34100729_34102853_34103562_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.23	chr17	-	3280	1	NIC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	0	-1157	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCATTCTTGCAGGACTC	9721	False	NA	NA	False	NA	NA	NA	34109607	34106327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34106300_34109600
ES.14989.24	chr17	-	319	1	Intergenic	novelGene_12531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9913	False	NA	NA	False	NA	NA	NA	34111103	34110784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34110800_34111100
ES.14989.25	chr17	-	169	1	Intergenic	novelGene_12532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAACTGCT	9912	False	NA	NA	False	NA	NA	NA	34111104	34110935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34110900_34111100
ES.14989.3	chr17	-	3965	9	NNC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	-1	2	intron_retention	TRUE	non_canonical	0	0	junction_2	180.797149797778	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTGTTTGTTTTG	9749	False	NA	-14	True	AATAAA	-19	NA	34109579	34094639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100557_34100729_34101036_34101130_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.4	chr17	-	2890	13	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_6	247.989191072694	390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTGTTTGTTTTG	9721	False	NA	-14	True	AATAAA	-19	NA	34109607	34094639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104047_34104137_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34107193_34107261_34108705_34109117_34109451
ES.14989.5	chr17	-	2989	10	NIC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	2	0	intron_retention	FALSE	canonical	1	168	junction_4	139.548301297657	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9725	False	NA	-16	True	AATAAA	-17	NA	34109603	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34105650_34105737_34105876_34109451
ES.14989.6	chr17	-	2474	10	NIC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-2	0	intron_retention	FALSE	canonical	1	168	junction_4	142.343871584897	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9748	False	NA	-16	True	AATAAA	-17	NA	34109580	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.7	chr17	-	1610	11	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	9	0	intron_retention	FALSE	canonical	1	17	junction_4	170.242062957425	390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9732	False	NA	-16	True	AATAAA	-17	NA	34109596	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102771_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ES.14989.9	chr17	-	2732	12	NNC	ENSMUSG00000079553.12	novel	2260	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_11	216.957169098282	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9720	False	NA	-16	True	AATAAA	-17	NA	34109608	34094641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34108705_34109117_34109451
ES.1499.1	chr1	-	145	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATATATAAA	NA	False	NA	NA	False	NA	NA	NA	137262762	137262617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_137262600_137262800
ES.14990.1	chr17	+	2924	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	-411	-1	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	281.404640026726	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5127	False	NA	11	True	AATAAA	-22	NA	34127976	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128438_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
ES.14990.12	chr17	+	2626	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	17	-1	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5639	False	NA	11	True	AATAAA	-22	NA	34128488	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
ES.14990.13	chr17	+	2391	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	221.116277472431	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5639	False	NA	11	True	AATAAA	-22	NA	34128488	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128573_34129523_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.14	chr17	+	2495	8	NIC	ENSMUSG00000002307.17	novel	2673	8	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	275.753365106116	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTCCTTTACTTTGC	5640	False	NA	10	True	AATAAA	-21	NA	34128489	34134562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132927_34133037_34134316
ES.14990.15	chr17	+	2668	8	NNC	ENSMUSG00000002307.17	novel	2673	8	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	284.297343624306	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTCCTTTACTTTGC	5640	False	NA	10	True	AATAAA	-21	NA	34128489	34134562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128696_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
ES.14990.16	chr17	+	2523	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	-31	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCCGTTTTGATGGTG	5640	False	NA	5	True	AGTAAA	-13	NA	34128489	34134461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
ES.14990.17	chr17	+	2044	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	224.475533869779	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5640	False	NA	11	True	AATAAA	-22	NA	34128489	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128573_34129404_34129646_34130676_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.18	chr17	+	2473	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.475389481542	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTTCCTTTACTTT	5640	False	NA	8	True	AATAAA	-19	NA	34128489	34134560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128573_34129437_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.19	chr17	+	2541	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	18	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	219.15347338785	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTCTTTCCTTTACT	5640	False	NA	6	True	AATAAA	-17	NA	34128489	34134558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
ES.14990.2	chr17	+	2546	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	222.120210145547	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5498	False	NA	11	True	AATAAA	-22	NA	34128347	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128468_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.20	chr17	+	2723	7	NIC	ENSMUSG00000002307.17	novel	2673	8	NA	NA	18	-1	intron_retention	FALSE	canonical	3	17	junction_1	235.781501960325	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5640	False	NA	11	True	AATAAA	-22	NA	34128489	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
ES.14990.21	chr17	+	3899	6	ISM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	72	6	19	2	intron_retention	FALSE	canonical	3	546	junction_5	25.2934774200781	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTCTTTCCTTTACT	5641	False	NA	6	True	AATAAA	-17	NA	34128490	34134558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246
ES.14990.22	chr17	+	2486	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	225.638594903895	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTCCTTTACTTTGC	5649	False	NA	10	True	AATAAA	-21	NA	34128498	34134562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131331_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.23	chr17	+	3436	6	NIC	ENSMUSG00000002307.17	novel	2673	8	NA	NA	38	-2	intron_retention	FALSE	canonical	3	546	junction_4	76.6065271370528	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTCCTTTACTTTGC	5660	False	NA	10	True	AATAAA	-21	NA	34128509	34134562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
ES.14990.24	chr17	+	2668	8	FSM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	12	-7	12	-1	multi-exon	FALSE	canonical	0	0	junction_1	226.475389481542	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5737	False	NA	11	True	AATAAA	-22	NA	34128586	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34128829_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.25	chr17	+	2187	6	ISM	ENSMUSG00000002307.17	ENSMUST00000170075.9	2673	8	1635	-7	959	-1	3prime_fragment	FALSE	canonical	3	546	junction_3	76.6472439165297	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	7360	False	NA	11	True	AATAAA	-22	NA	34130209	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.3	chr17	+	2466	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	222.120210145547	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5548	False	NA	11	True	AATAAA	-22	NA	34128397	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128438_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.4	chr17	+	2373	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	276.656273880697	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTTCCTTTACTTTG	5558	False	NA	9	True	AATAAA	-20	NA	34128407	34134561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34128468_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132927_34133037_34134316
ES.14990.5	chr17	+	3392	7	NIC	ENSMUSG00000002307.17	novel	2673	8	NA	NA	19	-2	intron_retention	FALSE	canonical	3	546	junction_4	69.9700332682182	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTCCTTTACTTTGC	5588	False	NA	10	True	AATAAA	-21	NA	34128437	34134562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.6	chr17	+	2552	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	29	0	-24	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5598	False	NA	12	True	AATAAA	-23	NA	34128447	34134564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.8	chr17	+	2615	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	220.781728022433	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTCTTTCCTTTACT	5627	False	NA	6	True	AATAAA	-17	NA	34128476	34134558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ES.14990.9	chr17	+	2409	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	211.832047449225	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCTTTACTTTGCC	5629	False	NA	11	True	AATAAA	-22	NA	34128478	34134563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132927_34133037_34134316
ES.14991.1	chr17	-	545	2	FSM	ENSMUSG00000092564.3	ENSMUST00000174467.2	462	2	-86	3	22	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTATATTCCCTTTT	1137	False	NA	-8	True	AATAAA	-20	NA	34128269	34127158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34127561_34128126
ES.14992.1	chr17	+	2639	2	FSM	ENSMUSG00000051390.11	ENSMUST00000174463.2	387	2	-70	-2182	-70	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCCCAACACCCC	NA	False	NA	10	True	ATTAAA	-19	NA	34134807	34138298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34134939_34135790
ES.14992.11	chr17	+	5642	8	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2589	8	NA	NA	0	-1	multi-exon	FALSE	canonical	3	105	junction_6	52.1657483999075	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34135159	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14992.12	chr17	+	4480	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2589	8	NA	NA	1	-1	multi-exon	FALSE	canonical	3	105	junction_7	48.9117508887179	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTTTGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	34135160	34147249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14992.13	chr17	+	2942	4	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2612	2	NA	NA	1	764	multi-exon	FALSE	canonical	2	6	junction_2	84.9274199929956	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTTGCCTTCATCATT	NA	False	NA	NA	False	NA	NA	NA	34135160	34140153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34137535_34138844_34139025_34139222
ES.14992.16	chr17	+	5388	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2898	8	NA	NA	7	-1	multi-exon	FALSE	canonical	1	1	junction_5	76.4607742571313	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34135166	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34145085_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.17	chr17	+	4803	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	614	3	NA	NA	8	0	multi-exon	FALSE	canonical	0	0	junction_2	78.0444584836105	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCTCTCATTCTCC	NA	False	NA	12	True	AATAAA	-17	NA	34135167	34148265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34138010_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.18	chr17	+	4328	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	614	3	NA	NA	8	0	multi-exon	FALSE	canonical	2	6	junction_2	76.4607742571313	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCTCTCATTCTCC	NA	False	NA	12	True	AATAAA	-17	NA	34135167	34148265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34137535_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.2	chr17	+	4322	9	NNC	ENSMUSG00000024308.16	novel	413	3	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	89.8383965796363	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34134863	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34134939_34135790_34137535_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.20	chr17	+	2547	2	NNC	ENSMUSG00000051390.11	novel	387	2	NA	NA	300	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCCCAACACCCC	NA	False	NA	10	True	ATTAAA	-19	NA	34135444	34138298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34135484_34135790
ES.14992.21	chr17	+	5567	8	FSM	ENSMUSG00000024308.16_ENSMUSG00000051390.11	ENSMUST00000234247.2	2589	8	-2979	1	472	-1	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	5	True	NA	11	True	AATAAA	-16	NA	34135631	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14992.22	chr17	+	6585	7	ISM	ENSMUSG00000024308.16_ENSMUSG00000051390.11	ENSMUST00000025161.10	2898	8	-2256	2	890	-1	intron_retention	FALSE	canonical	3	116	junction_6	37.4288213368611	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	343	False	NA	11	True	AATAAA	-16	NA	34136049	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600
ES.14992.23	chr17	+	3412	8	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2589	8	NA	NA	-537	-3	multi-exon	FALSE	canonical	1	3	junction_6	75.5015880357385	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCGGGCCTCTCATTC	466	False	NA	9	True	AATAAA	-14	NA	34137768	34148262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145476_34145603_34145681_34147113
ES.14992.24	chr17	+	3021	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2898	8	NA	NA	-492	-1	multi-exon	FALSE	non_canonical	0	0	junction_8	75.2336984003844	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	511	False	NA	11	True	AATAAA	-16	NA	34137813	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113_34147332_34147698
ES.14992.25	chr17	+	2751	8	NNC	ENSMUSG00000024308.16	novel	2589	8	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.481506985885	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	431	False	NA	11	True	AATAAA	-16	NA	34138444	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147116
ES.14992.26	chr17	+	2043	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	-135	681	-10	334	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACTCGAACTAAACTT	462	False	NA	NA	False	NA	NA	NA	34138475	34147584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14992.27	chr17	+	2594	7	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	448	2	-48	-1	3prime_fragment	FALSE	canonical	3	116	junction_5	39.5871050834598	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	740	False	NA	11	True	AATAAA	-16	NA	34138753	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.28	chr17	+	3569	4	NIC	ENSMUSG00000024308.16	novel	1305	6	NA	NA	-2016	-1	intron_retention	FALSE	canonical	3	116	junction_2	53.5433365498349	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	3674	False	NA	11	True	AATAAA	-16	NA	34143075	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.29	chr17	+	3297	20	Fusion	ENSMUSG00000024308.16_ENSMUSG00000041354.17	novel	943	8	NA	NA	-4	-2	multi-exon	FALSE	canonical	0	0	junction_4	54.0056937595357	450	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	1729	False	NA	10	True	AATAAA	-16	NA	34145087	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34145324_34145401_34145492_34145600_34145681_34147113_34147434_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.30	chr17	+	4893	16	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-63	-2	intron_retention	FALSE	canonical	3	69	junction_1	18.0881790742524	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3132	False	NA	10	True	AATAAA	-16	NA	34148453	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.31	chr17	+	3336	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	-84	0	-45	0	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3150	False	NA	12	True	AATAAA	-18	NA	34148471	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.32	chr17	+	5310	13	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	69	junction_1	18.6048082196213	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3153	False	NA	10	True	AATAAA	-16	NA	34148474	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34151193_34151294_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.33	chr17	+	5107	15	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-30	-4	intron_retention	FALSE	canonical	1	1	junction_9	34.0138777199986	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3165	False	NA	8	True	AATAAA	-14	NA	34148486	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154088_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.34	chr17	+	4932	15	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_4	43.2223133039746	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3181	False	NA	12	True	AATAAA	-18	NA	34148502	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34150784_34151013_34151193_34151294_34151324_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154088_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.35	chr17	+	5672	10	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	99	junction_2	13.7553581030524	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3182	False	NA	10	True	AATAAA	-16	NA	34148503	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.36	chr17	+	4719	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	-4	intron_retention	FALSE	canonical	0	0	junction_10	33.7457480314792	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3182	False	NA	8	True	AATAAA	-14	NA	34148503	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.37	chr17	+	3561	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	0	intron_retention	FALSE	canonical	3	51	junction_2	22.9910818307882	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3182	False	NA	12	True	AATAAA	-18	NA	34148503	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.38	chr17	+	2895	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	41.1125554366652	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3182	False	NA	12	True	AATAAA	-18	NA	34148503	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34148613_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154110_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.39	chr17	+	2679	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.6703210851639	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3183	False	NA	10	True	AATAAA	-16	NA	34148504	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34148613_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.4	chr17	+	5443	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2898	8	NA	NA	28	0	multi-exon	FALSE	canonical	3	17	junction_1	71.5968531082198	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	NA	False	NA	13	True	AATAAA	-18	NA	34134905	34148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34134939_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14992.40	chr17	+	4815	16	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-10	0	intron_retention	FALSE	canonical	3	69	junction_1	19.1689563849702	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3185	False	NA	12	True	AATAAA	-18	NA	34148506	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.41	chr17	+	4573	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	69	junction_1	19.5119154300648	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3193	False	NA	8	True	AATAAA	-14	NA	34148514	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.42	chr17	+	5353	13	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	99	junction_4	12.7962125472952	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3193	False	NA	12	True	AATAAA	-18	NA	34148514	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.43	chr17	+	4552	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	1	-3	intron_retention	FALSE	canonical	1	7	junction_9	31.587119111277	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	3196	False	NA	9	True	AATAAA	-15	NA	34148517	34156658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.44	chr17	+	5038	15	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	2	-3	intron_retention	FALSE	canonical	1	7	junction_7	32.5834094506479	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	3197	False	NA	9	True	AATAAA	-15	NA	34148518	34156658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.45	chr17	+	5265	12	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_7	37.6179137913911	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3203	False	NA	10	True	AATAAA	-16	NA	34148524	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154110_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.46	chr17	+	5229	13	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	17	0	intron_retention	FALSE	canonical	3	69	junction_1	18.6048082196213	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3212	False	NA	12	True	AATAAA	-18	NA	34148533	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.47	chr17	+	5113	14	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	17	-2	intron_retention	FALSE	canonical	1	7	junction_7	33.4782451662014	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3212	False	NA	10	True	AATAAA	-16	NA	34148533	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.48	chr17	+	3190	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	34.2226578660788	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	3212	False	NA	9	True	AATAAA	-15	NA	34148533	34156658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154188_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.49	chr17	+	5044	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	18	0	intron_retention	FALSE	canonical	3	69	junction_1	17.3394972033593	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3213	False	NA	12	True	AATAAA	-18	NA	34148534	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.50	chr17	+	4916	14	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-130	-4	intron_retention	FALSE	canonical	3	69	junction_1	17.8212691224866	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3426	False	NA	8	True	AATAAA	-14	NA	34148747	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.51	chr17	+	3544	16	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-130	-3	intron_retention	FALSE	canonical	3	51	junction_2	23.0300287065002	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	3426	False	NA	9	True	AATAAA	-15	NA	34148747	34156658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.52	chr17	+	2940	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-35	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	34.2226578660788	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3521	False	NA	8	True	AATAAA	-14	NA	34148842	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154128_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.53	chr17	+	2934	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	39.3652051583963	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3522	False	NA	12	True	AATAAA	-18	NA	34148843	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154128_34154230_34154333_34154430_34154518_34154631_34154722_34155008_34155836_34155952_34156038
ES.14992.54	chr17	+	2725	19	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	38.5935211731608	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3552	False	NA	10	True	AATAAA	-16	NA	34148873	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154810_34154856_34154965_34155008_34155836_34155952_34156038
ES.14992.55	chr17	+	3509	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	51	junction_2	23.5711038938678	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3553	False	NA	12	True	AATAAA	-18	NA	34148874	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.56	chr17	+	3436	14	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	51	junction_2	25.9181689031062	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3553	False	NA	12	True	AATAAA	-18	NA	34148874	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.57	chr17	+	3012	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	51	junction_2	24.2277604206414	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3554	False	NA	10	True	AATAAA	-16	NA	34148875	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.58	chr17	+	3148	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	16	-4	intron_retention	FALSE	canonical	1	7	junction_9	33.515329981219	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3572	False	NA	8	True	AATAAA	-14	NA	34148893	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.59	chr17	+	4931	12	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	18	-4	intron_retention	FALSE	canonical	1	1	junction_7	37.9815092027991	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	3574	False	NA	8	True	AATAAA	-14	NA	34148895	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154128_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.60	chr17	+	3253	16	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	21	-2	intron_retention	FALSE	canonical	3	51	junction_2	23.4363440455678	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3577	False	NA	10	True	AATAAA	-16	NA	34148898	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.61	chr17	+	2811	19	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.4828129856513	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3582	False	NA	12	True	AATAAA	-18	NA	34148903	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152103_34152195_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.62	chr17	+	2712	18	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	33.4050324617658	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCCCCATCCTTCAG	3583	False	NA	11	True	AATAAA	-17	NA	34148904	34156660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151536_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.63	chr17	+	4494	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	32	0	intron_retention	FALSE	canonical	3	69	junction_1	19.8350339406962	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3588	False	NA	12	True	AATAAA	-18	NA	34148909	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149019_34149218_34151193_34151294_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.64	chr17	+	2950	17	ISM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	500	2	108	-2	3prime_fragment	FALSE	canonical	3	51	junction_1	22.1957731054811	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3734	False	NA	10	True	AATAAA	-16	NA	34149055	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.65	chr17	+	4489	13	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	144	-28	intron_retention	FALSE	canonical	0	0	junction_10	34.084352063015	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATAAACCAAAACAC	3770	False	NA	-16	True	NA	NA	NA	34149091	34156633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154810_34155008_34155836_34155952_34156038
ES.14992.66	chr17	+	2751	17	NNC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	33.0789184186847	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	3914	False	NA	10	True	AATAAA	-16	NA	34149235	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.67	chr17	+	2973	15	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	136	-2	intron_retention	FALSE	canonical	3	51	junction_1	21.9926935919312	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4070	False	NA	10	True	AATAAA	-16	NA	34149391	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149416_34150699_34150784_34151013_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.68	chr17	+	3732	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	213	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.8747549010185	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4147	False	NA	12	True	AATAAA	-18	NA	34149468	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150609_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.69	chr17	+	4899	8	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	220	-2	intron_retention	FALSE	canonical	3	99	junction_2	10.4451922345319	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4154	False	NA	10	True	AATAAA	-16	NA	34149475	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34152235_34152324_34152429_34152514_34152600_34152685_34152946_34153948_34154230_34154333_34155008_34155836_34155952_34156038
ES.14992.7	chr17	+	2619	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	107	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCCCAACACCCC	NA	False	NA	10	True	ATTAAA	-19	NA	34135136	34138298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34135248_34135790
ES.14992.71	chr17	+	2775	17	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	36.5974192225354	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4521	False	NA	12	True	AATAAA	-18	NA	34149842	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.72	chr17	+	3576	12	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	21	junction_1	31.1777097744023	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4534	False	NA	10	True	AATAAA	-16	NA	34149855	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.73	chr17	+	2781	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4534	False	NA	12	True	AATAAA	-18	NA	34149855	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.74	chr17	+	2952	15	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	21	junction_1	29.2037179629092	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4534	False	NA	12	True	AATAAA	-18	NA	34149855	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.75	chr17	+	3191	14	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	21	junction_1	30.0962951581839	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4536	False	NA	10	True	AATAAA	-16	NA	34149857	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.76	chr17	+	2906	16	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	2	-2	intron_retention	FALSE	canonical	2	3	junction_1	31.3259565784599	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4537	False	NA	10	True	AATAAA	-16	NA	34149858	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34149918_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.77	chr17	+	2658	17	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.3600978690587	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	4545	False	NA	8	True	AATAAA	-14	NA	34149866	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34149918_34150699_34150803_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.78	chr17	+	3022	16	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	4	-2	intron_retention	FALSE	canonical	3	21	junction_1	27.370706157415	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4548	False	NA	10	True	AATAAA	-16	NA	34149869	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.79	chr17	+	2741	17	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	37.7391851230256	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4553	False	NA	12	True	AATAAA	-18	NA	34149874	34156661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154128_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.8	chr17	+	5510	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2898	8	NA	NA	6	0	multi-exon	FALSE	canonical	3	107	junction_1	46.628853728137	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	NA	False	NA	13	True	AATAAA	-18	NA	34135150	34148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ES.14992.80	chr17	+	3334	14	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	6	-4	intron_retention	FALSE	canonical	3	21	junction_1	28.6878734457651	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	4566	False	NA	8	True	AATAAA	-14	NA	34149887	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.81	chr17	+	3084	15	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	8	-2	intron_retention	FALSE	canonical	3	21	junction_1	28.3307721931688	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4568	False	NA	10	True	AATAAA	-16	NA	34149889	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.82	chr17	+	2553	17	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	36.943738897816	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	4568	False	NA	8	True	AATAAA	-14	NA	34149889	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151536_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.83	chr17	+	3746	10	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	9	-2	intron_retention	FALSE	canonical	3	21	junction_1	34.1438496531338	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4569	False	NA	10	True	AATAAA	-16	NA	34149890	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34152235_34152324_34152429_34152514_34152600_34152685_34152946_34153948_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.84	chr17	+	3414	13	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	9	-3	intron_retention	FALSE	canonical	3	21	junction_1	29.8575320852582	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTCCCCATCCTTC	4569	False	NA	9	True	AATAAA	-15	NA	34149890	34156658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.85	chr17	+	3273	13	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	21	junction_1	31.3249102153542	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTGTCCCCATCCTT	4578	False	NA	8	True	AATAAA	-14	NA	34149899	34156657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150045_34150699_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.86	chr17	+	3397	15	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-37	-2	intron_retention	FALSE	canonical	0	0	junction_1	32.8586956154839	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4826	False	NA	10	True	AATAAA	-16	NA	34150147	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34150609_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.87	chr17	+	3270	16	NNC	ENSMUSG00000041354.17	novel	943	8	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_1	40.5442967629234	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTCCCCATCCTTCA	4845	False	NA	10	True	AATAAA	-16	NA	34150166	34156659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34150609_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152736_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ES.14992.9	chr17	+	5582	9	Fusion	ENSMUSG00000024308.16_ENSMUSG00000051390.11	novel	2589	8	NA	NA	7	-1	multi-exon	FALSE	canonical	0	0	junction_4	77.9951921595171	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	False	NA	11	True	AATAAA	-16	NA	34135151	34148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34135248_34135790_34138699_34138844_34139025_34139222_34139562_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ES.14993.1	chr17	-	156	1	Intergenic	novelGene_12533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34141735	34141579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34141600_34141700
ES.14994.1	chr17	-	180	1	Intergenic	novelGene_12534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	34142689	34142509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34142500_34142700
ES.14995.1	chr17	-	1609	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	15	-817	2	817	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCTGGCTTGAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	34159302	34156977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ES.14995.2	chr17	-	714	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	6	87	-6	11	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTCTTTCTTCACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	34159311	34157881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ES.14995.4	chr17	-	557	5	FSM	ENSMUSG00000024309.16	ENSMUST00000174048.8	560	5	-12	15	-6	-11	multi-exon	FALSE	canonical	3	138	junction_4	444.939602642876	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACAGAACCAAGCCTA	NA	False	NA	-30	True	AATAAA	-2	NA	34159311	34157907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159270
ES.14995.5	chr17	-	683	3	FSM	ENSMUSG00000024309.16	ENSMUST00000173678.3	685	3	1	1	0	-1	multi-exon	FALSE	canonical	3	1189	junction_1	13.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGCCTTTCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	34159304	34158332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34158638_34158721_34158793_34158997
ES.14996.3	chr17	+	2216	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	-4	17	4	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACCATCCTGTAGGTC	1996	False	NA	17	True	ATTAAA	-20	NA	34159650	34168675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ES.14996.4	chr17	+	2010	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	17	202	17	-202	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAAGTGTCTTTTTAC	1996	False	NA	NA	False	NA	NA	NA	34159650	34168469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ES.14996.5	chr17	+	5958	13	NIC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	17	-1	intron_retention	FALSE	canonical	3	240	junction_8	25.9272486435067	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTCTGGACCATCCTGT	1996	False	NA	12	True	ATTAAA	-15	NA	34159650	34168670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34167712_34167809_34167906_34168046_34168161_34168251
ES.14996.6	chr17	+	2154	15	NNC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	103.57982724568	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTCTGGACCATCCT	2000	False	NA	10	True	ATTAAA	-13	NA	34159654	34168668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34159734_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163552_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ES.14996.8	chr17	+	2182	15	NNC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.430815736819	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTCTGGACCATCCT	2007	False	NA	10	True	ATTAAA	-13	NA	34159661	34168668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160503_34160632_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ES.14996.9	chr17	+	2105	14	NIC	ENSMUSG00000024312.11	novel	2229	15	NA	NA	28	-205	intron_retention	FALSE	canonical	3	240	junction_8	26.387194312178	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACAAGTGTCTTTT	2007	False	NA	NA	False	NA	NA	NA	34159661	34168466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167712_34167809_34167906_34168046_34168161_34168251
ES.14997.1	chr17	-	186	1	Intergenic	novelGene_12535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	34163128	34162942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34162900_34163100
ES.14998.1	chr17	+	2949	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	-77	511	-77	-511	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCTCCAGCATGTGTT	NA	False	NA	48	True	NA	NA	NA	34174708	34185498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.11	chr17	+	4528	14	NIC	ENSMUSG00000024319.19	novel	2014	19	NA	NA	-42	514	intron_retention	FALSE	canonical	2	228	junction_8	31.4360438361923	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34174846	34185461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34181521_34181699_34181796_34181883_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.12	chr17	+	3768	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-41	-1	intron_retention	FALSE	canonical	2	228	junction_9	32.381407559826	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34174847	34186008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.13	chr17	+	3462	18	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-41	513	intron_retention	FALSE	canonical	2	6	junction_10	74.90265886134	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGACCGTGTCCTCT	NA	False	NA	10	True	NA	NA	NA	34174847	34185460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180224_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.15	chr17	+	4164	17	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-40	-1	intron_retention	FALSE	canonical	2	228	junction_9	32.8383826489674	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34174848	34186008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.16	chr17	+	2780	20	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-40	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9969990140979	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174848	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175163_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.19	chr17	+	4192	17	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-37	-7	intron_retention	FALSE	canonical	2	228	junction_8	33.0373250089955	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCATAACTGTGATTTT	NA	False	NA	24	True	NA	NA	NA	34174851	34186002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.20	chr17	+	3233	19	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-36	516	intron_retention	FALSE	canonical	2	9	junction_13	71.1726296400277	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174852	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181536_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.23	chr17	+	2748	20	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	1	516	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	69.3361877031594	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174889	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181536_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.24	chr17	+	4105	18	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	1	514	intron_retention	FALSE	canonical	0	0	junction_2	96.5650900118492	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34174889	34185461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176148_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181536_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.25	chr17	+	4020	17	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	7	518	intron_retention	FALSE	canonical	3	233	junction_10	28.2641004633086	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACCGTGTCCTCTCCTTT	NA	False	NA	15	True	NA	NA	NA	34174895	34185465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.26	chr17	+	3936	18	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	129	-1	intron_retention	FALSE	canonical	2	228	junction_9	33.1927369384799	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34175047	34186008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.28	chr17	+	3940	16	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	129	515	intron_retention	FALSE	canonical	2	9	junction_10	76.6859106282822	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACCGTGTCCTCTCC	NA	False	NA	12	True	NA	NA	NA	34175047	34185462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34181536_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.3	chr17	+	4118	18	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-51	-1	intron_retention	FALSE	canonical	2	228	junction_9	32.0626549248569	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34174734	34186008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.30	chr17	+	2287	14	NIC	ENSMUSG00000024319.19	novel	2014	19	NA	NA	135	521	intron_retention	FALSE	canonical	0	0	junction_2	85.5451712919025	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGTCCTCTCCTTTGTC	NA	False	NA	18	True	NA	NA	NA	34175053	34185468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.31	chr17	+	3016	19	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	143	516	intron_retention	FALSE	canonical	2	2	junction_12	73.8854635797534	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34175061	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181389_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.32	chr17	+	3273	20	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	143	514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.5946348818689	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34175061	34185461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176148_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181000_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.34	chr17	+	3069	20	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	144	523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9969990140979	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCCTCTCCTTTGTCCC	NA	False	NA	20	True	NA	NA	NA	34175062	34185470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175659_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.35	chr17	+	3344	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	144	1	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGATTTTGTACTGTT	NA	False	NA	32	True	NA	NA	NA	34175062	34186010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.37	chr17	+	4554	21	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	148	2164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	70.7377374532152	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAGAATTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	34175066	34188173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932_34186059_34186770
ES.14998.39	chr17	+	4492	15	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	174	521	intron_retention	FALSE	canonical	3	265	junction_7	24.1822375359456	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGTCCTCTCCTTTGTC	NA	False	NA	18	True	NA	NA	NA	34175092	34185468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.4	chr17	+	3793	17	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	31	520	intron_retention	FALSE	canonical	2	228	junction_9	29.0058587831838	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTGTCCTCTCCTTTGT	NA	False	NA	17	True	NA	NA	NA	34174816	34185467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.40	chr17	+	4313	16	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	206	514	intron_retention	FALSE	canonical	0	0	junction_2	79.8241400413016	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34175124	34185461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176148_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34181521_34181699_34181796_34181883_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.41	chr17	+	3012	19	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	1117	1	984	-1	3prime_fragment	FALSE	canonical	2	228	junction_9	32.6428484595869	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTGATTTTGTACTG	NA	False	NA	30	True	NA	NA	NA	34175902	34186008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.42	chr17	+	3150	17	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	1030	520	intron_retention	FALSE	canonical	2	4	junction_10	76.5497183208403	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTGTCCTCTCCTTTGT	NA	False	NA	17	True	NA	NA	NA	34175948	34185467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181000_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.43	chr17	+	3770	15	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	1030	514	intron_retention	FALSE	canonical	2	228	junction_8	30.6067886293888	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGACCGTGTCCTCTC	NA	False	NA	11	True	NA	NA	NA	34175948	34185461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.44	chr17	+	157	1	Intergenic	novelGene_12536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATAAATCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34186207	34186364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34186200_34186400
ES.14998.5	chr17	+	2896	21	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	36	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.003410262881	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174821	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176148_34176255_34176833_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.6	chr17	+	3327	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	56	0	-47	0	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGATTTTGTACTGT	NA	False	NA	31	True	NA	NA	NA	34174841	34186009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.7	chr17	+	3023	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-46	522	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34174842	34185469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.8	chr17	+	3510	18	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-46	516	intron_retention	FALSE	canonical	2	3	junction_6	75.7826065809801	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGACCGTGTCCTCTCCT	NA	False	NA	13	True	NA	NA	NA	34174842	34185463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178923_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14998.9	chr17	+	3233	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	-46	521	intron_retention	FALSE	canonical	2	228	junction_9	32.381407559826	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTGTCCTCTCCTTTGTC	NA	False	NA	18	True	NA	NA	NA	34174842	34185468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ES.14999.1	chr17	-	5665	2	FSM	ENSMUSG00000008668.16_ENSMUSG00000067370.5	ENSMUST00000173323.2	448	2	-3122	-2095	0	0	multi-exon	FALSE	canonical	3	23355	junction_1	0	1250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCAGCGTCTTCACCAG	NA	False	NA	-2	True	AATAAA	-17	NA	34174637	34168882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171287_34171376
ES.14999.11	chr17	-	358	4	NNC	ENSMUSG00000008668.16	novel	632	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10251.3125338498	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174635	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171060_34171436_34171566_34174051_34174151_34174591
ES.14999.12	chr17	-	3536	2	FSM	ENSMUSG00000008668.16	ENSMUST00000173323.2	448	2	-3084	-4	28	0	multi-exon	FALSE	canonical	3	23355	junction_1	0	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174599	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171287_34171376
ES.14999.14	chr17	-	526	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	1	0	0	multi-exon	FALSE	canonical	3	518	junction_2	9115.60860557319	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
ES.14999.15	chr17	-	642	4	NIC	ENSMUSG00000008668.16	novel	560	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	20050	junction_3	1505.03444035898	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174632	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34171287_34171376_34171566_34174051_34174151_34174591
ES.14999.16	chr17	-	635	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174175.8	632	4	-3	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_3	1274.65978031613	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171093_34171194_34171566_34174051_34174151_34174591
ES.14999.17	chr17	-	537	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9689.6864371351	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174635	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171087_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ES.14999.19	chr17	-	531	5	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9689.6864371351	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171208_34171287_34171376_34171566_34174051_34174151_34174591
ES.14999.2	chr17	-	1559	2	Genic_Genomic	ENSMUSG00000067370.5	novel	1580	1	NA	NA	-352	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGCAGCGTCTTCACC	NA	False	NA	-4	True	AATAAA	-15	NA	34170814	34168884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34170253_34170623
ES.14999.22	chr17	-	852	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	9788.68576469794	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174592	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174239
ES.14999.23	chr17	-	3121	3	NIC	ENSMUSG00000008668.16	novel	632	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	20050	junction_2	513.5	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34171093_34171194_34174151_34174591
ES.14999.26	chr17	-	538	5	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9786.52957832857	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174144_34174591
ES.14999.28	chr17	-	3560	2	ISM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	3	0	0	intron_retention	FALSE	canonical	3	21077	junction_1	0	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCGTCTCAGTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	34174637	34170975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34171093_34171194
ES.14999.3	chr17	-	1506	2	Genic_Genomic	ENSMUSG00000067370.5	novel	1580	1	NA	NA	-290	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAAGTGCAGCGTCTTC	NA	False	NA	-7	True	AATAAA	-12	NA	34170752	34168887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34170265_34170623
ES.14999.30	chr17	-	555	5	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9338.29794448646	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCTCCGTCTCAGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	34174637	34170976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171194_34171300_34171376_34171566_34174051_34174151_34174591
ES.14999.32	chr17	-	336	4	NNC	ENSMUSG00000008668.16	novel	632	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10251.3125338498	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCTCCGTCTCAGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	34174636	34170976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171023_34171419_34171566_34174051_34174151_34174591
ES.14999.33	chr17	-	708	6	FSM	ENSMUSG00000008668.16	ENSMUST00000234380.2	715	6	2	5	-1	0	multi-exon	FALSE	canonical	1	30	junction_3	10301.0144238322	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACCTCCGTCTCAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	34174635	34170977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34172713_34172883_34174051_34174151_34174591
ES.14999.34	chr17	-	542	5	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9689.6864371351	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGACCTCCGTCTCAG	NA	False	NA	NA	False	AATAAA	-11	NA	34174633	34170980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171186_34171287_34171376_34171566_34174051_34174151_34174591
ES.14999.4	chr17	-	686	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	-125	-1	-125	1	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCAGTTTGTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	34174776	34170971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ES.14999.5	chr17	-	3666	1	Genic_Genomic	ENSMUSG00000008668.16	novel	NA	NA	NA	NA	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCAGTTTGTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	34174637	34170971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34171000_34174600
ES.14999.6	chr17	-	3032	4	NIC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	20050	junction_3	1381.10414765385	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34171093_34171194_34171287_34171376_34174151_34174591
ES.14999.7	chr17	-	531	5	NNC	ENSMUSG00000008668.16	novel	715	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9338.29794448646	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174637	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34171093_34171194_34171287_34171390_34171566_34174051_34174151_34174591
ES.14999.8	chr17	-	3225	2	FSM	ENSMUSG00000008668.16	ENSMUST00000174662.2	395	2	-5	-2825	-2	0	multi-exon	FALSE	canonical	3	20050	junction_1	0	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174639	34170973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34174151_34174591
ES.15.1	chr1	+	2465	1	Genic_Genomic	ENSMUSG00000033813.16	novel	NA	NA	NA	NA	-834	-38461	mono-exon	FALSE	NA	NA	NA	NA	NA	984	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGCCCAACCAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	4927202	4929667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_4927200_4929700
ES.15.11	chr1	+	407	4	ISM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-34	11121	-34	-11121	5prime_fragment	FALSE	canonical	3	1526	junction_2	170.069266934257	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTGCAATTTCATCACA	NA	False	NA	NA	False	GATAAA	-22	NA	4928002	4957007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966
ES.15.15	chr1	+	6338	8	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1526	junction_2	173.734608773596	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATGTTTTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	4928007	4968128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.16	chr1	+	2505	9	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	760.504232401109	1087	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACATGTTTTTTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	4928011	4968127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4948249_4948356_4956966_4957055_4959682_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.19	chr1	+	4595	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-22	-2026	-22	2022	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTTTGGTGGGGTTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	4928014	4970154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.2	chr1	+	2856	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-223	-86	-223	82	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTGATGGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	4927813	4968214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.20	chr1	+	2582	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	606.804522391735	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928016	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959661_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.23	chr1	+	2449	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	605.297498531421	1087	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928017	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959793_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.25	chr1	+	2575	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	606.804522391735	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928017	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957067_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.29	chr1	+	1437	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-19	1129	-19	-1129	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATGTGGCCAGCTTA	NA	False	NA	NA	False	TATAAA	-33	NA	4928017	4966999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.30	chr1	+	2505	11	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-19	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	575.732064418858	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928017	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578_4966911_4966968
ES.15.31	chr1	+	4150	1	Genic_Genomic	ENSMUSG00000033813.16	novel	NA	NA	NA	NA	-19	-35961	mono-exon	FALSE	NA	NA	NA	NA	NA	984	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTTGTTGAAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	4928017	4932167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_4928000_4932200
ES.15.32	chr1	+	4754	9	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-19	-437	intron_retention	FALSE	canonical	3	1526	junction_2	182.037770805951	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGCTTCTGCCTGTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	4928017	4967691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.34	chr1	+	2579	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	595.509678995881	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACATACATGTTTTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	4928020	4968123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961038_4962134_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.35	chr1	+	1886	9	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-12	-1332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	624.198974186116	1075	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTTGCTTTGTTTTTC	NA	False	NA	NA	False	CATAAA	-11	NA	4928024	4966796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961834_4963639_4963787_4965156_4965229_4966578
ES.15.38	chr1	+	2454	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-2	95	-2	-95	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATTAGTTTAAAAGTA	NA	False	NA	NA	False	AATAAA	-11	NA	4928034	4968033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.39	chr1	+	4143	2	NNC	ENSMUSG00000033813.16	novel	2854	10	NA	NA	-2	-34700	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGCCTTTGTCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4928034	4933428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4932060_4933310
ES.15.40	chr1	+	3853	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	592.186719803063	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928035	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4964239_4964300_4965229_4966578
ES.15.42	chr1	+	5175	9	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-1	2	intron_retention	FALSE	canonical	3	1526	junction_2	182.037770805951	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTTTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	4928035	4968130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.44	chr1	+	2363	11	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	575.732064418858	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928037	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578_4967158_4967337
ES.15.48	chr1	+	1591	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	9	-944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	595.509678995881	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGACTTGGTTTATTT	NA	False	NA	NA	False	AATAGA	-11	NA	4928045	4967184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961029_4962149_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.5	chr1	+	2232	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-105	420	-105	-420	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGACTCCTGTGTAAA	NA	False	NA	NA	False	AGTAAA	-33	NA	4927931	4967708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.54	chr1	+	5859	8	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	17	-433	intron_retention	FALSE	canonical	3	1526	junction_2	173.734608773596	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTGCCTGTGTTCAG	NA	False	NA	NA	False	AGTAAA	-20	NA	4928053	4967695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.55	chr1	+	1129	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	18	1400	18	-1400	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACAGTCTGTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	4928054	4966728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.56	chr1	+	585	4	ISM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	18	10891	18	-10891	5prime_fragment	FALSE	canonical	3	1526	junction_2	170.069266934257	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	4928054	4957237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966
ES.15.6	chr1	+	2635	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	-90	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	595.509678995881	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4927946	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961029_4962145_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.60	chr1	+	2853	10	FSM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	-6	7	-6	-3	multi-exon	FALSE	canonical	0	0	junction_1	598.922180068311	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928254	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928727_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.61	chr1	+	2514	10	NNC	ENSMUSG00000033813.16	novel	2854	10	NA	NA	249	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	597.426786671052	1087	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4928509	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4928643_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.62	chr1	+	172	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	994	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4942372	4942544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_4942400_4942500
ES.15.63	chr1	+	6386	1	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	22650	-10832	mono-exon	FALSE	NA	NA	NA	NA	NA	989	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAGCAGAAAATAAA	3611	False	NA	NA	False	NA	NA	NA	4950910	4957296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4950900_4957300
ES.15.64	chr1	+	2729	6	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	30815	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	772.977981575155	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACATGTTTTTTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	4959075	4968127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_4959826_4960962_4961020_4962138_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.65	chr1	+	3070	1	NIC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	36795	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1053	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	4965055	4968125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_4965100_4968100
ES.15.7	chr1	+	1377	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-84	1254	-84	-1254	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTGATCTGTT	NA	False	NA	NA	False	ATTAAA	-27	NA	4927952	4966874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.15.9	chr1	+	1644	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	-34	937	-34	-937	multi-exon	FALSE	canonical	3	1526	junction_2	186.842443693696	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTTATTTTATTTGA	NA	False	NA	NA	False	AATAGA	-18	NA	4928002	4967191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ES.150.1	chr1	-	2086	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	16701593	16699507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16699500_16701600
ES.1500.1	chr1	+	3021	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCGACAGGAGCAAGG	NA	False	NA	NA	False	NA	NA	NA	138534052	138537073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_138534100_138537100
ES.15000.1	chr17	-	1988	4	NIC	ENSMUSG00000067203.9	novel	1567	5	NA	NA	-17	24	intron_retention	FALSE	canonical	3	8	junction_2	6.0184900284226	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTATGCTGTGTGTAT	3664	False	NA	NA	False	AATAAA	-29	NA	34197781	34193608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34194588_34194714_34194990_34196844_34197498_34197700
ES.15000.2	chr17	-	2783	6	Fusion	ENSMUSG00000092512.3_ENSMUSG00000067203.9	novel	1567	5	NA	NA	104	18	intron_retention	FALSE	canonical	0	0	junction_5	7.96492310069595	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTCACTATGCTGT	1817	False	NA	NA	False	AATAAA	-23	NA	34199628	34193614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_34194054_34194470_34194588_34194714_34194990_34196844_34197498_34197700_34198778_34199406
ES.15000.3	chr17	-	1699	5	NNC	ENSMUSG00000067203.9	novel	1052	6	NA	NA	18	18	intron_retention	FALSE	non_canonical	0	0	junction_1	10.3047319227625	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTCACTATGCTGT	3662	False	NA	NA	False	AATAAA	-23	NA	34197783	34193614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34194069_34194453_34194588_34194714_34194990_34196744_34197498_34197700
ES.15000.4	chr17	-	2118	3	NIC	ENSMUSG00000067203.9	novel	1567	5	NA	NA	9	16	intron_retention	FALSE	canonical	3	8	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTGAGTCACTATGCT	3653	False	NA	NA	False	AATAAA	-21	NA	34197792	34193616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34194990_34196844_34197498_34197700
ES.15000.5	chr17	-	1656	5	NNC	ENSMUSG00000067203.9	novel	1567	5	NA	NA	18	14	intron_retention	FALSE	canonical	1	1	junction_4	7.58287544405155	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATCTGAGTCACTATG	3662	False	NA	NA	False	AATAAA	-19	NA	34197783	34193618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34194054_34194470_34194588_34194714_34194990_34196844_34197591_34197700
ES.15001.1	chr17	+	3841	1	Genic_Genomic	ENSMUSG00000118084.2	novel	NA	NA	NA	NA	-3	2554	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAAAAACACATTT	1852	False	NA	NA	False	NA	NA	NA	34200464	34204305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_34200500_34204300
ES.15002.1	chr17	+	180	1	Intergenic	novelGene_12537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAAAAAAGGCCCTC	631	False	NA	NA	False	NA	NA	NA	34212614	34212794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34212600_34212800
ES.15003.1	chr17	+	187	1	Intergenic	novelGene_12538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTCAGGGGGCGGT	1120	False	NA	NA	False	NA	NA	NA	34213103	34213290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34213100_34213300
ES.15004.1	chr17	-	2246	4	NIC	ENSMUSG00000061232.17	novel	1874	6	NA	NA	0	6	intron_retention	FALSE	canonical	3	37	junction_3	15.8954920234218	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGTATCTGTTGGGA	NA	False	NA	2	True	AATAAA	-38	NA	34219257	34214984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34216132_34216258_34216535_34218244_34218978_34219167
ES.15004.2	chr17	-	2063	5	NIC	ENSMUSG00000061232.17	novel	1874	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	37	junction_4	22.8089894559141	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTGTGTGTATCTGT	NA	False	NA	-3	True	AATAAA	-33	NA	34219257	34214989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
ES.15004.3	chr17	-	1564	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	7	-1	-1	1	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTGTGTGTATCTGT	NA	False	NA	-3	True	AATAAA	-33	NA	34219256	34214989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ES.15004.4	chr17	-	1630	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	26	-37	-16	1	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTGTGTGTATCTGT	NA	False	NA	-3	True	AATAAA	-33	NA	34219295	34214989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ES.15004.5	chr17	-	1748	7	NIC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	37	junction_6	25.0560482829108	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTATGCTGTGTGTATC	NA	False	NA	-6	True	AATAAA	-30	NA	34219256	34214992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
ES.15004.6	chr17	-	1801	7	NIC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	37	junction_6	25.5907969568923	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGGTCACTATGCTGT	NA	False	NA	-13	True	AATAAA	-23	NA	34219289	34214999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
ES.15004.7	chr17	-	1558	8	NIC	ENSMUSG00000061232.17	novel	1065	8	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.5640948844744	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGGGTCACTATGCT	NA	False	NA	-15	True	AATAAA	-21	NA	34219256	34215001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34215478_34215589_34215629_34215800_34215849_34216011_34216132_34216258_34216535_34218244_34218485_34218707_34218978_34219167
ES.15004.8	chr17	-	1544	7	NNC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.3355262208798	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCCAGAATCTGG	NA	False	NA	-26	True	AATAAA	-10	NA	34219259	34215012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34215451_34215589_34215629_34215978_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ES.15005.1	chr17	-	2893	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	63	junction_2	9.61769203083567	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243631	34240057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34243393_34243483
ES.15005.10	chr17	-	3267	3	NNC	ENSMUSG00000024325.9	novel	2552	3	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_2	43	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCAGTTCTCTGTG	NA	False	NA	-2	True	NA	NA	NA	34243629	34240061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34240458_34240656_34242169_34242270
ES.15005.11	chr17	-	1326	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	33.0175710796539	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCAGTTCTCTGTG	NA	False	NA	-2	True	NA	NA	NA	34243632	34240061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34240931_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ES.15005.2	chr17	-	1735	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	4	295	4	-3	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243650	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ES.15005.3	chr17	-	2546	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	63	junction_3	8.61162005664439	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243626	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34243393_34243483
ES.15005.4	chr17	-	2008	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	78	junction_2	4.01995024844836	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243630	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262_34243393_34243483
ES.15005.5	chr17	-	2346	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	80	junction_2	3.11247489949718	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243629	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262_34243393_34243483
ES.15005.6	chr17	-	2842	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	78	junction_2	3.83242742918897	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243629	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34243393_34243483
ES.15005.8	chr17	-	3177	4	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	80	junction_2	3.09120616516523	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243625	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34242169_34242266_34243393_34243483
ES.15005.9	chr17	-	2074	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	4	-3	intron_retention	FALSE	canonical	3	63	junction_2	9.32523458149981	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCAGTTCTCTGTGT	NA	False	NA	-1	True	NA	NA	NA	34243650	34240060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ES.15006.1	chr17	+	2925	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	-642	0	-53	0	multi-exon	FALSE	canonical	3	20	junction_1	64.8690989609074	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250732	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.10	chr17	+	953	1	FSM	ENSMUSG00000039656.18	ENSMUST00000173554.9	939	1	-11	-3	-7	3	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTCACTTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	34250778	34251731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34250800_34251700
ES.15006.11	chr17	+	4571	8	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	122	junction_5	42.4446818860522	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	False	NA	19	True	CATAAA	-19	NA	34250779	34257371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.12	chr17	+	3726	8	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	65	junction_5	54.3950027716757	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250783	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.14	chr17	+	2972	10	NNC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4174501380916	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250787	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251561_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.15	chr17	+	5601	3	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-117	0	intron_retention	FALSE	canonical	3	136	junction_1	42.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251052	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251198_34251800_34256247_34256357
ES.15006.16	chr17	+	3793	9	NIC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	-114	0	intron_retention	FALSE	canonical	3	122	junction_6	39.8369724627763	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251055	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.17	chr17	+	4288	8	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-95	0	intron_retention	FALSE	canonical	3	65	junction_5	57.8075625304707	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	False	NA	19	True	CATAAA	-19	NA	34251074	34257371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.18	chr17	+	3246	7	NIC	ENSMUSG00000039656.18	novel	2502	10	NA	NA	-75	0	intron_retention	FALSE	canonical	3	20	junction_1	77.4632529368316	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34251299	34257373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34255732_34255834_34256247_34256357
ES.15006.19	chr17	+	2232	10	NNC	ENSMUSG00000039656.18	novel	2502	10	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4174501380916	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251311	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251345_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.2	chr17	+	4266	7	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-32	0	intron_retention	FALSE	canonical	3	65	junction_4	58.6619316270972	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250753	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.20	chr17	+	2842	9	NIC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-61	0	intron_retention	FALSE	canonical	3	20	junction_1	68.3076679443823	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251313	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.21	chr17	+	4703	6	NIC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-37	0	intron_retention	FALSE	canonical	3	20	junction_1	81.7841060353416	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251337	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251459_34251800_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140
ES.15006.22	chr17	+	2421	10	NNC	ENSMUSG00000039656.18	novel	2502	10	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.3694041036767	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251350	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251561_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.23	chr17	+	2046	10	NNC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-14	-353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4174501380916	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGGAGGTGGAGGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	34251360	34257014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251561_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.24	chr17	+	2157	10	NNC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-6	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4174501380916	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATTGCTCTTTTAATT	NA	False	NA	NA	False	AATAAA	-32	NA	34251368	34257031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251663_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.25	chr17	+	2238	10	NNC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	84.353459756192	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251368	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253125_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.26	chr17	+	2293	10	FSM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	207	2	2	0	multi-exon	FALSE	canonical	3	20	junction_1	72.5503656472905	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251376	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.27	chr17	+	2574	9	ISM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	598	8	49	-2	3prime_fragment	FALSE	canonical	3	122	junction_6	33.6749164809655	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGCCATTTTCTGG	NA	False	NA	13	True	CATAAA	-13	NA	34251423	34257365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.3	chr17	+	2306	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	-19	340	-19	-336	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATTGCTCTTTTAATT	NA	False	NA	NA	False	AATAAA	-32	NA	34250766	34257031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.4	chr17	+	3128	9	NIC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	122	junction_6	39.7169674068905	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250766	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.5	chr17	+	2636	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	-56	-3	-16	3	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGGACTGAGATAAC	NA	False	NA	24	True	CATAAA	-24	NA	34250769	34257376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15006.6	chr17	+	3248	9	NIC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-15	1	intron_retention	FALSE	canonical	3	65	junction_6	50.9986213048941	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCTGGACTGAGATA	NA	False	NA	22	True	CATAAA	-22	NA	34250770	34257374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.7	chr17	+	2642	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	-15	0	-15	0	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	False	NA	19	True	CATAAA	-19	NA	34250770	34257371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.8	chr17	+	2226	8	NNC	ENSMUSG00000039656.18	novel	2627	10	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	85.5030731038603	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAGCCATTTTCTGGA	NA	False	NA	14	True	CATAAA	-14	NA	34250774	34257366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34251198_34251800_34252012_34254690_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ES.15006.9	chr17	+	3723	8	NIC	ENSMUSG00000039656.18	novel	2283	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	122	junction_5	35.9909285622851	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34250774	34257367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ES.15007.1	chr17	-	979	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	-14	0	-10	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247044	34245006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ES.15007.10	chr17	-	2437	15	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	168	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	232.827528791733	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34250386	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34247826_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.11	chr17	-	1081	7	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	6	junction_2	58.0220264688812	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247029	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
ES.15007.12	chr17	-	3754	13	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	-37	0	intron_retention	FALSE	canonical	3	139	junction_4	216.674278712439	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34250591	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.13	chr17	-	1207	7	NIC	ENSMUSG00000073422.12	novel	1133	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	92	junction_6	42.1689722689826	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247023	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ES.15007.14	chr17	-	3797	13	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	-91	0	intron_retention	FALSE	canonical	3	114	junction_7	223.609903378381	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34250645	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.15	chr17	-	1812	3	ISM	ENSMUSG00000073422.12	ENSMUST00000173894.2	753	4	-18	-880	0	-1	intron_retention	FALSE	canonical	3	162	junction_1	7.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247030	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34246076_34246176_34246270_34246379
ES.15007.16	chr17	-	4048	11	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	-97	0	intron_retention	FALSE	canonical	3	139	junction_3	224.283659681217	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34250651	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245910_34245989_34246076_34246176_34246270_34246379_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.17	chr17	-	1354	6	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	114	junction_5	30.0626013511805	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34246076_34246176_34246270_34246379_34246497_34246596
ES.15007.18	chr17	-	1378	6	NIC	ENSMUSG00000073422.12	novel	728	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	114	junction_5	32.8304736487307	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCGGTTCTTCTTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	34247034	34245008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379_34246497_34246596
ES.15007.19	chr17	-	3044	10	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	967	-6	intron_retention	FALSE	canonical	3	139	junction_4	219.619761192323	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCACCTCCGGTTCTTC	NA	False	NA	-8	True	AATAAA	-16	NA	34249587	34245013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.2	chr17	-	3436	14	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	182	1	intron_retention	FALSE	canonical	3	114	junction_7	220.702187622374	569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34250372	34245006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.20	chr17	-	1056	7	NNC	ENSMUSG00000073422.12	novel	1133	8	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_2	68.8825489914213	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCACCTCCGGTTCTT	NA	False	NA	-9	True	AATAAA	-15	NA	34247034	34245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34245445_34245824_34245878_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ES.15007.21	chr17	-	1513	5	NIC	ENSMUSG00000073422.12	novel	728	7	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	114	junction_4	33.6080347536121	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCACCTCCGGTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	34247031	34245015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245445_34245636_34246076_34246176_34246270_34246379_34246497_34246596
ES.15007.22	chr17	-	3040	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-718	-2	-656	2	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGTCTTTATGTGGG	NA	False	NA	0	True	AATAAA	-28	NA	34251312	34247240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.23	chr17	-	2109	8	FSM	ENSMUSG00000024327.17	ENSMUST00000169397.9	1550	8	-34	-525	-14	-2	multi-exon	FALSE	canonical	3	49	junction_7	197.419371296905	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTTTGTCTTTATG	NA	False	NA	-4	True	AATAAA	-24	NA	34250670	34247244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797_34250237_34250521
ES.15007.24	chr17	-	2952	5	NIC	ENSMUSG00000024327.17	novel	2433	6	NA	NA	-370	-2	intron_retention	FALSE	canonical	3	600	junction_2	23.7526314331697	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTTTGTCTTTATG	NA	False	NA	-4	True	AATAAA	-24	NA	34251026	34247244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249396_34249539
ES.15007.25	chr17	-	1701	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-45	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTTTGTCTTTATG	NA	False	NA	-4	True	AATAAA	-24	NA	34250701	34247244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
ES.15007.26	chr17	-	1939	8	NNC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	266.956313784461	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34250662	34247245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249958_34250237_34250521
ES.15007.27	chr17	-	2840	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	-406	-1	-372	1	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGCCTTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-23	NA	34251028	34247245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.28	chr17	-	2922	5	NIC	ENSMUSG00000024327.17	novel	2433	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	568	junction_3	23.6273147014213	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250670	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.29	chr17	-	2631	4	ISM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	31	4	31	0	intron_retention	FALSE	canonical	3	600	junction_2	25.7293606605372	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250563	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063
ES.15007.3	chr17	-	989	9	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	2	13	junction_8	57.8748650106417	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246954
ES.15007.31	chr17	-	1553	7	NNC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	231.179163324802	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250373	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250339
ES.15007.32	chr17	-	2172	7	ISM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	-92	2239	-92	-868	5prime_fragment	FALSE	canonical	3	49	junction_6	213.075104129976	496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250646	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34250237_34250521
ES.15007.33	chr17	-	2299	7	NNC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_2	228.558283352166	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250583	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248043_34248483_34248681_34248825_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.34	chr17	-	1773	6	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	33	junction_5	238.647522509663	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250662	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249396_34249539_34249709_34250521
ES.15007.36	chr17	-	2593	5	NIC	ENSMUSG00000024327.17	novel	2433	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	568	junction_3	34.5280682923328	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250643	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248958_34249063_34249229_34249341_34249396_34249539
ES.15007.37	chr17	-	2230	7	NNC	ENSMUSG00000024327.17	novel	2433	6	NA	NA	-13	0	intron_retention	FALSE	canonical	2	7	junction_6	228.591338418585	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250669	34247246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249958
ES.15007.39	chr17	-	2456	6	NIC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	543	junction_5	43.1768456467121	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCAGCCTTTGTCTT	NA	False	NA	-8	True	AATAAA	-20	NA	34250592	34247248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249709_34249797
ES.15007.4	chr17	-	1479	5	NIC	ENSMUSG00000073422.12	novel	1293	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	162	junction_3	17.6210101867061	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379
ES.15007.40	chr17	-	2181	7	NNC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	224.5220231712	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCAGCCTTTGTCTT	NA	False	NA	-8	True	AATAAA	-20	NA	34250518	34247248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248043_34248483_34248624_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.41	chr17	-	3342	1	NIC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	3	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	496	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACATGCAGCCTTTGTCT	NA	False	NA	-9	True	AATAAA	-19	NA	34250591	34247249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34247200_34250600
ES.15007.42	chr17	-	2227	6	NIC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	78	-4	intron_retention	FALSE	canonical	3	543	junction_5	39.8376706146331	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACATGCAGCCTTTGTC	NA	False	NA	-10	True	AATAAA	-18	NA	34250396	34247250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249396_34249539_34249709_34249797
ES.15007.43	chr17	-	2035	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	-169	454	-107	73	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTGTCAGCCTTGGAG	NA	False	NA	0	True	AATAAA	-35	NA	34250763	34247696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.45	chr17	-	1869	7	NNC	ENSMUSG00000024327.17	novel	2320	7	NA	NA	11	71	intron_retention	FALSE	non_canonical	0	0	junction_1	222.344639892418	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGAGTGTCAGCCTTGG	NA	False	NA	-2	True	AATAAA	-33	NA	34250583	34247698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34248055_34248479_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ES.15007.46	chr17	-	1167	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	0	56	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTGCTAATGCCAGAAG	NA	False	NA	-17	True	AATAAA	-18	NA	34250636	34247713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
ES.15007.5	chr17	-	2263	6	FSM	ENSMUSG00000024327.17_ENSMUSG00000073422.12	ENSMUST00000170644.8	1293	6	-968	-2	-954	-1	multi-exon	FALSE	canonical	3	162	junction_4	17.6748408762286	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247988	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34246270_34246379
ES.15007.6	chr17	-	1057	8	NIC	ENSMUSG00000073422.12	novel	965	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	92	junction_7	35.8249713388381	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247023	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246815_34246975
ES.15007.8	chr17	-	2027	1	NIC	ENSMUSG00000092595.3	novel	3711	11	NA	NA	1492	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34245000_34247000
ES.15007.9	chr17	-	1273	7	NNC	ENSMUSG00000073422.12	novel	965	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	69.5207802666864	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	False	NA	-2	True	AATAAA	-22	NA	34247034	34245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34245200_34245325_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379
ES.15008.1	chr17	+	1035	4	ISM	ENSMUSG00000024334.10	ENSMUST00000025192.8	1088	5	1356	1	1274	0	3prime_fragment	FALSE	canonical	2	3	junction_1	6.79869268479038	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	555	False	NA	NA	False	ACTAAA	-15	NA	34312669	34314207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34313056_34313281_34313564_34313656_34313793_34313976
ES.15008.2	chr17	+	1261	3	ISM	ENSMUSG00000024334.10	ENSMUST00000174670.2	1231	4	1274	0	1274	0	3prime_fragment	FALSE	canonical	2	15	junction_1	2	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGTCCTTTTCAC	555	False	NA	NA	False	ACTAAA	-15	NA	34312669	34314207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34313564_34313656_34313793_34313976
ES.15009.1	chr17	+	160	1	Intergenic	novelGene_12539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	1450	False	NA	NA	False	NA	NA	NA	34327118	34327278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34327100_34327300
ES.1501.1	chr1	+	2717	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-7	NA	138540544	138543261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_138540500_138543300
ES.15010.1	chr17	+	3702	1	Antisense	novelGene_ENSMUSG00000024335.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTTGAGAGCCACAGG	1582	False	NA	NA	False	NA	NA	NA	34331640	34335342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34331600_34335300
ES.15010.2	chr17	+	2758	2	Antisense	novelGene_ENSMUSG00000024335.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2404	False	NA	NA	False	NA	NA	NA	34332462	34335311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34334551_34334641
ES.15011.1	chr17	+	1737	6	Fusion	ENSMUSG00000037649.11_ENSMUSG00000117829.2	novel	1108	5	NA	NA	-182	4	multi-exon	FALSE	canonical	0	0	junction_1	17.0481670569009	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGACCTCTCCCTCCAC	9301	False	NA	10	True	AATAAA	-18	NA	34339359	34358056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34339561_34354155_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
ES.15011.2	chr17	+	3271	3	NNC	ENSMUSG00000037649.11	novel	711	2	NA	NA	3	-9089	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCGATTCTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	34341798	34345297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34342502_34342546_34343339_34343521
ES.15011.3	chr17	+	1776	6	NIC	ENSMUSG00000037649.11	novel	1658	6	NA	NA	23	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.0481670569009	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGACCTCTCCCTCCAC	NA	False	NA	10	True	AATAAA	-18	NA	34341842	34358056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34342083_34354155_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
ES.15011.4	chr17	+	2098	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	-1008	18	-1008	4	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGACCTCTCCCTCCAC	5790	False	NA	10	True	AATAAA	-18	NA	34353593	34358056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
ES.15012.1	chr17	-	4850	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	-189	-4	-155	4	multi-exon	TRUE	canonical	3	100	junction_12	100.678634774216	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTAGTGAGATTTGT	5905	False	NA	-5	True	AATAAA	-27	NA	34341763	34330992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
ES.15012.10	chr17	-	4351	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	160.703004394136	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGTTTTCTTAGTGAG	6085	False	NA	-11	True	AATAAA	-21	NA	34341583	34330998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341540
ES.15012.11	chr17	-	4775	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	2	junction_6	171.910909911924	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGTTTTCTTAGTGAG	6091	False	NA	-11	True	AATAAA	-21	NA	34341577	34330998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333478_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.12	chr17	-	5263	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-330	-2	intron_retention	FALSE	canonical	3	14	junction_12	122.024900691985	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGTTTTCTTAGTGAG	7453	False	NA	-11	True	AATAAA	-21	NA	34340215	34330998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34339168
ES.15012.13	chr17	-	4436	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	794	-2	intron_retention	FALSE	canonical	3	88	junction_9	137.141659282451	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGTTTTCTTAGTGAG	9077	False	NA	-11	True	AATAAA	-21	NA	34338591	34330998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
ES.15012.14	chr17	-	4448	13	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-163	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	121.012023048217	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAGTTTTCTTAGTGAG	7620	False	NA	-11	True	AATAAA	-21	NA	34340048	34330998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34339816
ES.15012.16	chr17	-	5242	4	NIC	ENSMUSG00000024335.21	novel	4482	9	NA	NA	-841	-3	intron_retention	FALSE	canonical	3	318	junction_2	33.5592345297419	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGTTTTCTTAGTGA	9364	False	NA	-12	True	AATAAA	-20	NA	34338304	34330999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34334239_34334335_34335310_34335881_34336186_34337579
ES.15012.17	chr17	-	4571	11	NIC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	-243	-3	intron_retention	FALSE	canonical	3	100	junction_10	97.9185375707787	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGTTTTCTTAGTGA	6463	False	NA	-12	True	AATAAA	-20	NA	34341205	34330999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
ES.15012.18	chr17	-	4247	14	NNC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	78	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	155.276123587025	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGTTTTCTTAGTGA	8361	False	NA	-12	True	AATAAA	-20	NA	34339307	34330999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338622_34338728_34338875_34339168
ES.15012.19	chr17	-	4203	13	NNC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	162.013952588452	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGTTTTCTTAGTGA	6077	False	NA	-12	True	AATAAA	-20	NA	34341591	34330999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334488_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341540
ES.15012.2	chr17	-	4000	10	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-845	3	intron_retention	FALSE	canonical	3	318	junction_8	41.9773601532076	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTTAGTGAGATTTG	9360	False	NA	-6	True	AATAAA	-26	NA	34338308	34330993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.20	chr17	-	4445	12	NIC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_11	123.525351230807	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTAGTTTTCTTAGTG	6095	False	NA	-13	True	AATAAA	-19	NA	34341573	34331000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341540
ES.15012.21	chr17	-	3569	10	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	7	1	intron_retention	FALSE	canonical	3	88	junction_8	149.541108762362	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTTAGTTTTCTTAG	8413	False	NA	-15	True	AATAAA	-17	NA	34336162	34331002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881
ES.15012.22	chr17	-	4556	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	277	0	intron_retention	FALSE	canonical	3	88	junction_9	148.677573404106	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6371	False	NA	-16	True	AATAAA	-16	NA	34341297	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.23	chr17	-	6075	14	FSM	ENSMUSG00000024335.21	ENSMUST00000154232.9	4520	14	-1555	0	-16	0	multi-exon	FALSE	canonical	3	14	junction_13	158.425425309877	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6728	False	NA	-16	True	AATAAA	-16	NA	34340940	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339168
ES.15012.24	chr17	-	5098	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-73	0	intron_retention	FALSE	canonical	3	14	junction_11	127.277792107014	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	7710	False	NA	-16	True	AATAAA	-16	NA	34339958	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34339168
ES.15012.25	chr17	-	3605	12	NNC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-844	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	130.325656950211	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	9361	False	NA	-16	True	AATAAA	-16	NA	34338307	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332768_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.26	chr17	-	3931	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-841	0	intron_retention	FALSE	canonical	3	88	junction_9	128.833802863731	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	9364	False	NA	-16	True	AATAAA	-16	NA	34338304	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
ES.15012.27	chr17	-	4953	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	6	junction_6	171.342040009322	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6055	False	NA	-16	True	AATAAA	-16	NA	34341613	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333625_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.28	chr17	-	4706	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-63	0	intron_retention	FALSE	canonical	3	6	junction_5	184.76178356648	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	7720	False	NA	-16	True	AATAAA	-16	NA	34339948	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34333152_34333323_34333625_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339816
ES.15012.29	chr17	-	4326	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	162.702928847503	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6744	False	NA	-16	True	AATAAA	-16	NA	34340924	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333478_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34340834
ES.15012.3	chr17	-	4850	13	NIC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	6	junction_6	146.624496778525	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTCTTAGTGAGATT	6074	False	NA	-8	True	AATAAA	-24	NA	34341594	34330995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333625_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
ES.15012.30	chr17	-	4470	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_13	157.78485089386	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	7685	False	NA	-16	True	AATAAA	-16	NA	34339983	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339816
ES.15012.31	chr17	-	4379	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	159.720206544752	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6758	False	NA	-16	True	AATAAA	-16	NA	34340910	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34340834
ES.15012.32	chr17	-	5248	10	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	26	0	intron_retention	FALSE	canonical	3	88	junction_6	149.709183105689	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6120	False	NA	-16	True	AATAAA	-16	NA	34341548	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.33	chr17	-	3310	13	NNC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	125.582282676428	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6343	False	NA	-16	True	AATAAA	-16	NA	34341325	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34337835_34341186
ES.15012.34	chr17	-	4880	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-268	0	intron_retention	FALSE	canonical	3	88	junction_8	154.220031713841	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	6438	False	NA	-16	True	AATAAA	-16	NA	34341230	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.35	chr17	-	3647	12	NNC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-838	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	129.402185529591	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	9367	False	NA	-16	True	AATAAA	-16	NA	34338301	34331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334553_34334634_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.36	chr17	-	3394	12	NNC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-628	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	129.017584809524	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9577	False	NA	-18	True	AATAAA	-14	NA	34338091	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332469_34332588_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.37	chr17	-	4481	8	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-839	-2	intron_retention	FALSE	canonical	3	318	junction_6	42.6102411758162	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9366	False	NA	-18	True	AATAAA	-14	NA	34338302	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34332807_34332905_34333152_34333323_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.38	chr17	-	4652	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-94	-2	intron_retention	FALSE	canonical	3	18	junction_11	168.006198232768	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	7689	False	NA	-18	True	AATAAA	-14	NA	34339979	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339816
ES.15012.39	chr17	-	4257	13	NNC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	151.687452788071	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	7797	False	NA	-18	True	AATAAA	-14	NA	34339871	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331946_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34339816
ES.15012.4	chr17	-	4337	13	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	124.055403169534	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	6715	False	NA	-9	True	AATAAA	-23	NA	34340953	34330996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34340834
ES.15012.40	chr17	-	4216	9	NIC	ENSMUSG00000024335.21	novel	2617	12	NA	NA	486	-2	intron_retention	FALSE	canonical	3	318	junction_8	58.5549955170351	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	7598	False	NA	-18	True	AATAAA	-14	NA	34336977	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34333152_34333323_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881
ES.15012.41	chr17	-	3411	13	NNC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-844	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	125.582282676428	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9361	False	NA	-18	True	AATAAA	-14	NA	34338307	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34337835_34338065
ES.15012.42	chr17	-	5016	8	NIC	ENSMUSG00000024335.21	novel	2617	12	NA	NA	-430	-2	intron_retention	FALSE	canonical	3	318	junction_7	44.1033109960729	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9775	False	NA	-18	True	AATAAA	-14	NA	34337893	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332456_34332543_34333152_34333323_34333453_34333863_34334551_34334641_34334781_34335171_34335310_34335881
ES.15012.43	chr17	-	4259	13	NIC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	125.582282676428	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	6078	False	NA	-18	True	AATAAA	-14	NA	34341590	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341540
ES.15012.45	chr17	-	3878	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-841	-2	intron_retention	FALSE	canonical	3	88	junction_9	136.262022746528	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9364	False	NA	-18	True	AATAAA	-14	NA	34338304	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
ES.15012.46	chr17	-	3821	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-843	-2	intron_retention	FALSE	canonical	3	88	junction_9	134.652475863604	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9362	False	NA	-18	True	AATAAA	-14	NA	34338306	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579
ES.15012.47	chr17	-	5441	11	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	88	junction_7	149.043617776811	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	6090	False	NA	-18	True	AATAAA	-14	NA	34341578	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332807_34332905_34333152_34333323_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.48	chr17	-	4826	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	13	-2	intron_retention	FALSE	canonical	3	88	junction_9	149.819335645748	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	6107	False	NA	-18	True	AATAAA	-14	NA	34341561	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.49	chr17	-	4584	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	18	junction_12	162.148829954322	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	7741	False	NA	-18	True	AATAAA	-14	NA	34339927	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339816
ES.15012.5	chr17	-	4787	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	88	junction_10	145.754555786584	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	6055	False	NA	-10	True	AATAAA	-22	NA	34341613	34330997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.50	chr17	-	4434	8	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-844	-2	intron_retention	FALSE	canonical	3	88	junction_6	117.162541900088	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9361	False	NA	-18	True	AATAAA	-14	NA	34338307	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34333152_34333323_34333453_34333863_34334551_34334641_34334781_34335171_34335310_34335571_34336186_34337579
ES.15012.51	chr17	-	5519	11	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-844	-2	intron_retention	FALSE	canonical	3	88	junction_9	143.429425153976	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGAGTTAGTTTTCT	9361	False	NA	-18	True	AATAAA	-14	NA	34338307	34331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34335310_34335571_34335664_34335881
ES.15012.54	chr17	-	4050	11	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-843	-4	intron_retention	FALSE	canonical	3	318	junction_9	52.8988657723396	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGAGTTAGTTTT	9362	False	NA	-20	True	AATAAA	-12	NA	34338306	34331007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.55	chr17	-	5060	12	NIC	ENSMUSG00000024335.21	novel	4657	13	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	100	junction_11	105.119294687999	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGAGTTAGTTTT	6071	False	NA	-20	True	AATAAA	-12	NA	34341597	34331007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34335310_34335881_34336186_34337579_34338875_34341135
ES.15012.56	chr17	-	2916	6	NIC	ENSMUSG00000024335.21	novel	2617	12	NA	NA	-82	-4	intron_retention	FALSE	canonical	3	364	junction_5	31.4540935332748	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGAGTTAGTTTT	9662	False	NA	-20	True	AATAAA	-12	NA	34334526	34331007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332456_34332543_34332807_34332905_34333152_34333323_34334239_34334335
ES.15012.57	chr17	-	4518	14	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	182.962439964791	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTGAGTTAGTTTT	6081	False	NA	-20	True	AATAAA	-12	NA	34341587	34331007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333625_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341540
ES.15012.58	chr17	-	4283	14	NNC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-305	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	169.618960366984	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGTTTTGAGTTAGTT	6401	False	NA	-22	True	AATAAA	-10	NA	34341267	34331009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334405_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15012.6	chr17	-	3797	11	NIC	ENSMUSG00000024335.21	novel	4483	13	NA	NA	-844	-1	intron_retention	FALSE	canonical	3	318	junction_9	53.2605858022609	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	9361	False	NA	-10	True	AATAAA	-22	NA	34338307	34330997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579
ES.15012.7	chr17	-	5333	11	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-843	-1	intron_retention	FALSE	canonical	3	88	junction_9	134.429944580811	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	9362	False	NA	-10	True	AATAAA	-22	NA	34338306	34330997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881
ES.15012.8	chr17	-	6555	10	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	261	-1	intron_retention	FALSE	canonical	3	88	junction_7	165.566368028722	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	6355	False	NA	-10	True	AATAAA	-22	NA	34341313	34330997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34334239_34334335_34334781_34335171_34335310_34335571_34335664_34335881_34338875_34341135
ES.15012.9	chr17	-	4573	13	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-265	-1	intron_retention	FALSE	canonical	3	88	junction_9	149.771191229229	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	6441	False	NA	-10	True	AATAAA	-22	NA	34341227	34330997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34341135
ES.15013.1	chr17	+	1308	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	89	7	89	-7	multi-exon	FALSE	canonical	3	11	junction_3	6.61513416341649	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCCCAAGTTTGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	34372134	34379197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
ES.15014.1	chr17	+	175	1	Intergenic	novelGene_12540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAGGTTTATTTTC	5590	False	NA	NA	False	NA	NA	NA	34382758	34382933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34382800_34382900
ES.15015.1	chr17	-	853	6	FSM	ENSMUSG00000096727.4	ENSMUST00000174576.4	1352	6	438	61	12	-7	multi-exon	FALSE	canonical	2	4	junction_1	3.70944739819828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	34406300	34401021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403388_34404703_34404772_34406223
ES.15015.2	chr17	-	4026	3	NIC	ENSMUSG00000096727.4	novel	1352	6	NA	NA	6	-7	intron_retention	FALSE	canonical	2	4	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	34406321	34401021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34401326_34402062_34402719_34403255
ES.15016.1	chr17	+	3073	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	-122	2	-122	-2	multi-exon	FALSE	canonical	0	0	junction_8	3.91024295920343	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTCCCGTTTCTTAG	6869	False	NA	NA	False	AATAAA	-18	NA	34406404	34416197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
ES.15016.2	chr17	+	3147	9	NNC	ENSMUSG00000037321.18	novel	2953	11	NA	NA	6	-616	intron_retention	FALSE	canonical	0	0	junction_2	4.94816885322237	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGCTTATTAGTGGGT	6997	False	NA	NA	False	NA	NA	NA	34406532	34414945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34407380_34408151_34408267_34409536_34409743_34410302_34410499_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817
ES.15016.3	chr17	+	6141	6	NIC	ENSMUSG00000037321.18	novel	2953	11	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_3	5.17687164221791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTCCCGTTTCTTAG	7003	False	NA	NA	False	AATAAA	-18	NA	34406538	34416197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34407380_34408151_34408267_34408403_34412633_34412854_34413018_34413817_34413955_34415541
ES.15016.4	chr17	+	3003	10	NIC	ENSMUSG00000037321.18	novel	2953	11	NA	NA	-61	1	intron_retention	FALSE	canonical	0	0	junction_7	4.10960933531265	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTTCTCCCGTTTCTT	7105	False	NA	NA	False	AATAAA	-16	NA	34406640	34416195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412633_34412854_34413018_34413817_34413955_34415541
ES.15016.5	chr17	+	2929	10	NIC	ENSMUSG00000037321.18	novel	2953	11	NA	NA	-18	1	intron_retention	FALSE	canonical	0	0	junction_7	4.10359673613764	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTTCTCCCGTTTCTT	7148	False	NA	NA	False	AATAAA	-16	NA	34406683	34416195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34407380_34408151_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
ES.15017.1	chr17	+	2482	12	FSM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	958	2	-82	1	multi-exon	FALSE	canonical	1	1	junction_4	2.62221910942836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGTTATGGTTACTA	6104	False	NA	NA	False	AATAAA	-23	NA	34423458	34435293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34423598_34424260_34424759_34424843_34424959_34427727_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
ES.15017.2	chr17	+	1708	9	ISM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	5215	36	1036	-33	3prime_fragment	FALSE	canonical	1	1	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAAATATATATA	NA	False	NA	NA	False	NA	NA	NA	34427715	34435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
ES.15018.1	chr17	+	4523	1	Intergenic	novelGene_12541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTTTGGTCTGTGGTG	3582	False	NA	NA	False	NA	NA	NA	34438545	34443068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34438500_34443100
ES.15019.1	chr17	+	922	5	NIC	ENSMUSG00000073421.7	novel	1212	6	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.6417628099162	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTGGCTTTGATA	NA	False	NA	5	True	NA	NA	NA	34482183	34488386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34482380_34483734_34484008_34486896_34487008_34487434_34487459_34488068
ES.15019.2	chr17	+	1760	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	53	9	1	0	intron_retention	FALSE	canonical	3	16	junction_1	18.6681547025945	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGATTTGGCTTTGA	NA	False	NA	3	True	NA	NA	NA	34482235	34488384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434
ES.15019.3	chr17	+	1120	4	NNC	ENSMUSG00000073421.7	novel	1212	6	NA	NA	1319	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	27.7888866675551	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCTTTGATAATTGC	NA	False	NA	10	True	NA	NA	NA	34483623	34488391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34484008_34486309_34486592_34486896_34487008_34488048
ES.15019.4	chr17	+	3690	3	NIC	ENSMUSG00000073421.7	novel	889	5	NA	NA	1351	-2	intron_retention	FALSE	canonical	3	57	junction_1	1	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTTGATTTGGCTTT	NA	False	NA	1	True	NA	NA	NA	34483655	34488382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34487008_34487434_34487459_34488068
ES.15019.5	chr17	+	1058	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1502	7	1380	2	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTGGCTTTGATA	NA	False	NA	5	True	NA	NA	NA	34483684	34488386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
ES.1502.1	chr1	-	4317	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-16	957	-16	5	multi-exon	TRUE	canonical	3	136	junction_1	7.19739321808962	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGATCATCGTCTTGCTT	NA	False	NA	5	True	AATAAA	-23	NA	138547503	138411569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.10	chr1	-	3935	9	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.7184930861704	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTAGTATCTATCAG	NA	False	NA	-15	True	AATAAA	-13	NA	138547493	138411852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471946_138472082_138547289
ES.1502.12	chr1	-	4078	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	58.9057722129164	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTTTAGTATCTATC	NA	False	NA	-17	True	AATAAA	-11	NA	138547480	138411854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138487563_138487633_138489440_138489524_138547289
ES.1502.13	chr1	-	3916	9	NIC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-4	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	48.6743002004138	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTACTGTAAGTTTTA	NA	False	NA	-26	True	AATAAA	-2	NA	138547491	138411863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138414849_138426313_138426428_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.14	chr1	-	3568	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.1972849844875	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTACTGTAAGTTTTA	NA	False	NA	-26	True	AATAAA	-2	NA	138547449	138411863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138413195_138413595_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.15	chr1	-	4005	10	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.1567378011536	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTACTGTAAGTTTTA	NA	False	NA	-26	True	AATAAA	-2	NA	138547441	138411863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426472_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.16	chr1	-	4110	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	7	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0088129011252	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGATGAGTACTGTAA	NA	False	NA	-32	True	TATAAA	-10	NA	138547480	138411869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426125_138426242_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.18	chr1	-	3919	9	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-18	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.6527099257452	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTTATTAGCTTCA	NA	False	NA	-87	True	AATATA	-10	NA	138547505	138411924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138507654_138507819_138547289
ES.1502.19	chr1	-	3922	10	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-7	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.0549859232967	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTCTGTTATTAGC	NA	False	NA	-91	True	AATATA	-6	NA	138547449	138411928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489542_138547289
ES.1502.2	chr1	-	4402	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.124005367834	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGATCATCGTCTTGCT	NA	False	NA	4	True	AATAAA	-22	NA	138547425	138411570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138507654_138507819_138547289
ES.1502.20	chr1	-	3934	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-27	1351	-27	-114	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTATTTTGTTATGC	NA	False	NA	-126	True	NA	NA	NA	138547514	138411963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.21	chr1	-	3464	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-28	1822	-28	-585	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTTTATGAGTAAA	NA	False	NA	NA	False	ATTAAA	-41	NA	138547515	138412434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.22	chr1	-	3567	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-13	-586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0088129011252	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTGTTTATGAGTAA	NA	False	NA	NA	False	ATTAAA	-40	NA	138547455	138412435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426077_138426242_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.23	chr1	-	3306	9	NIC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-16	-668	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	47.0649484754844	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTGTGATGTTTGC	NA	False	NA	NA	False	AATAAA	-20	NA	138547503	138412517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138471940_138472082_138489440_138489524_138547289
ES.1502.24	chr1	-	2066	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	40	3152	-5	-1915	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGTTCCCTTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	138547447	138413764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.25	chr1	-	2747	8	ISM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	32	17825	-13	13045	5prime_fragment	FALSE	canonical	3	139	junction_3	7.14856914468389	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TTTAAA	-40	NA	138547455	138428437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.26	chr1	-	3290	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAACCTTAGGACTTGA	NA	False	NA	NA	False	NA	NA	NA	138543359	138540069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_138540100_138543400
ES.1502.27	chr1	-	2432	1	NIC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	2	-103571	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTTAAAGTCAATT	NA	False	NA	NA	False	AATAAA	-15	NA	138547485	138545053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138545100_138547500
ES.1502.3	chr1	-	4110	8	FSM	ENSMUSG00000026393.11	ENSMUST00000027642.5	3737	8	-94	-279	-19	4	multi-exon	FALSE	canonical	2	8	junction_1	49.1424418587104	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGATCATCGTCTTGCT	NA	False	NA	4	True	AATAAA	-22	NA	138547506	138411570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.4	chr1	-	4216	9	NIC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	48.6980492422438	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGATGATCATCGTC	NA	False	NA	-1	True	AATAAA	-17	NA	138547491	138411575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138547289
ES.1502.6	chr1	-	4055	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	-23	1226	-23	11	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGTCCCCTCCCTTTT	NA	False	NA	-1	True	AATAAA	-27	NA	138547510	138411838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.7	chr1	-	3800	8	FSM	ENSMUSG00000026393.11	ENSMUST00000027642.5	3737	8	-62	-1	13	1	multi-exon	FALSE	canonical	2	8	junction_1	49.1424418587104	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATCTATCAGGTCC	NA	False	NA	-11	True	AATAAA	-17	NA	138547474	138411848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ES.1502.8	chr1	-	4109	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	58.5082045528659	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAGTATCTATCAGG	NA	False	NA	-14	True	AATAAA	-14	NA	138547468	138411851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138481787_138481897_138489440_138489524_138547289
ES.1502.9	chr1	-	4150	11	NNC	ENSMUSG00000026393.11	novel	5258	10	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.124005367834	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTAGTATCTATCAG	NA	False	NA	-15	True	AATAAA	-13	NA	138547455	138411852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138507654_138507819_138547289
ES.15020.1	chr17	+	1266	7	NNC	ENSMUSG00000060586.12	novel	1669	6	NA	NA	-5567	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	69.5477453904071	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34519273	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34519432_34524926_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ES.15020.2	chr17	+	1207	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	-13	475	-13	0	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524827	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ES.15020.3	chr17	+	1787	5	NIC	ENSMUSG00000060586.12	novel	1669	6	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	177	junction_2	8.63133825081603	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTGCTTCATAGAGTTT	NA	False	NA	10	True	AATAAA	-14	NA	34524836	34535171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34525022_34528564_34528835_34533143_34534128_34534529_34534554_34534847
ES.15020.4	chr17	+	1179	5	NNC	ENSMUSG00000060586.12	novel	1669	6	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.2388716686068	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524857	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534154_34534847
ES.15020.5	chr17	+	1079	6	FSM	ENSMUSG00000060586.12	ENSMUST00000236232.2	1082	6	3	0	3	0	multi-exon	FALSE	canonical	2	14	junction_1	73.665731517443	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524902	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34525022_34528617_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ES.15020.6	chr17	+	1181	5	FSM	ENSMUSG00000060586.12	ENSMUST00000235501.2	782	5	-152	-247	-152	0	multi-exon	FALSE	canonical	3	177	junction_1	12.5896783120142	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34528396	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ES.15020.7	chr17	+	1081	6	NNC	ENSMUSG00000060586.12	novel	782	5	NA	NA	-144	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	91.5235488822412	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34528404	34535173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34528466_34528564_34528835_34533143_34533433_34534016_34534128_34534529_34534554_34534847
ES.15020.8	chr17	+	5462	3	NIC	ENSMUSG00000060586.12	novel	782	5	NA	NA	461	-6	intron_retention	FALSE	canonical	3	195	junction_1	2.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCATCTGCTTCATAGA	NA	False	NA	6	True	AATAAA	-10	NA	34529009	34535167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34534128_34534529_34534554_34534847
ES.15021.1	chr17	-	629	1	Antisense	novelGene_ENSMUSG00000060586.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATTCTCTTCATAGCC	7184	False	NA	NA	False	AATAAA	-13	NA	34528812	34528183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_34528200_34528800
ES.15022.1	chr17	-	83	1	Intergenic	novelGene_12542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTTTCTTGTGTGAT	6575	False	NA	NA	False	NA	NA	NA	34529421	34529338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34529300_34529400
ES.15023.1	chr17	+	4356	3	ISM	ENSMUSG00000067341.7	ENSMUST00000050325.10	3392	5	-24	3266	-24	-3266	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGAGCAAGTTTTTTT	885	False	NA	NA	False	NA	NA	NA	34544614	34557120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34544766_34552256_34552524_34553182
ES.15023.2	chr17	+	2286	4	NNC	ENSMUSG00000067341.7	novel	3392	5	NA	NA	7642	-952	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCCTGAGAAACCAGA	5821	False	NA	NA	False	ATTAAA	-15	NA	34552280	34559434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34552524_34553182_34553465_34554748_34554860_34557784
ES.15024.1	chr17	+	866	4	ISM	ENSMUSG00000062638.12	ENSMUST00000080254.7	2113	10	5090	-5	4336	5	3prime_fragment	FALSE	canonical	2	4	junction_1	3.29983164553722	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATGGTTGCACCCTGC	2749	False	NA	NA	False	GATAAA	-25	NA	34601195	34605007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34601242_34601435_34601463_34603334_34603362_34604241
ES.15024.2	chr17	+	830	3	NIC	ENSMUSG00000062638.12	novel	2113	10	NA	NA	4337	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTGATATCATGGTTG	2750	False	NA	NA	False	GATAAA	-17	NA	34601196	34604999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34601242_34603334_34603362_34604241
ES.15024.3	chr17	+	3754	4	ISM	ENSMUSG00000062638.12	ENSMUST00000080254.7	2113	10	5102	-2905	4348	2905	3prime_fragment	FALSE	canonical	2	4	junction_1	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTCATTTGTTTTAT	2761	False	NA	NA	False	AATAAA	-11	NA	34601207	34607907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34601242_34601435_34601463_34603334_34603362_34604241
ES.15025.1	chr17	-	176	1	Intergenic	novelGene_12543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGACCATATAA	8767	False	NA	NA	False	NA	NA	NA	34623624	34623448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34623400_34623600
ES.15026.1	chr17	-	182	1	Genic_Genomic	ENSMUSG00000058435.7	novel	NA	NA	NA	NA	9213	19	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTGTTTCTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	34685698	34685516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34685500_34685700
ES.15027.1	chr17	+	307	1	Intergenic	novelGene_12544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	34758981	34759288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_34759000_34759300
ES.15028.1	chr17	-	4798	2	NNC	ENSMUSG00000061728.6	novel	1763	9	NA	NA	10318	1282	intron_retention	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTCTCTTATTTGTA	NA	False	NA	NA	False	NA	NA	NA	34756307	34750568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34753464_34754404
ES.15028.2	chr17	-	3635	2	NNC	ENSMUSG00000061728.6	novel	1763	9	NA	NA	11898	1280	intron_retention	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGCATTCTCTTATTTG	NA	False	NA	NA	False	NA	NA	NA	34754727	34750570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34753470_34753991
ES.15028.3	chr17	-	3391	7	NNC	ENSMUSG00000061728.6	novel	1763	9	NA	NA	4088	1277	intron_retention	FALSE	non_canonical	0	0	junction_3	3.53160335006952	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGGCATTCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	34762537	34750573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34752957_34756066_34756094_34759687_34759740_34760022_34760224_34760335_34760618_34761427_34761779_34762442
ES.15028.4	chr17	-	3129	8	NNC	ENSMUSG00000061728.6	novel	1763	9	NA	NA	4077	1274	intron_retention	FALSE	canonical	1	2	junction_3	2.79941684889506	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATAGTGGCATTCTCT	NA	False	NA	NA	False	NA	NA	NA	34762548	34750576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34752582_34752929_34752957_34756066_34756094_34759687_34759818_34760022_34760224_34760335_34760618_34761427_34761779_34762442
ES.15029.1	chr17	+	4140	6	Antisense	novelGene_ENSMUSG00000061728.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.4	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGCTTTGCTGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	34762699	34776290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34764991_34766467_34766674_34772388_34772587_34772848_34773113_34773290_34773505_34775323
ES.15029.2	chr17	+	3821	6	Antisense	novelGene_ENSMUSG00000061728.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTGCTTTGCTGGGGTA	NA	False	NA	NA	False	NA	NA	NA	34762699	34776289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34764991_34766467_34766674_34772848_34773113_34773290_34773505_34775323_34775692_34775811
ES.15029.3	chr17	+	3940	5	Antisense	novelGene_ENSMUSG00000061728.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTGCTTTGCTGGGGT	NA	False	NA	NA	False	NA	NA	NA	34762699	34776288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34764991_34766467_34766674_34772848_34773113_34773290_34773505_34775323
ES.15029.4	chr17	+	3696	3	Antisense	novelGene_ENSMUSG00000061728.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTTTTTTAATATTTT	NA	False	NA	NA	False	NA	NA	NA	34762699	34774047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_34764991_34766467_34766674_34772848
ES.1503.1	chr1	-	178	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	138778009	138777831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_138777800_138778000
ES.15030.1	chr17	-	156	1	Intergenic	novelGene_12545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	34774238	34774082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34774100_34774200
ES.15031.1	chr17	+	6668	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	-67	-10	-67	10	multi-exon	TRUE	canonical	3	55	junction_11	11.3350235386032	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAGGGTGAGATGGAA	NA	False	NA	24	True	AATAAA	-33	NA	34783174	34807487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.11	chr17	+	7483	27	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_25	17.3128624756449	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGAGGGACTAAAGGG	NA	False	NA	14	True	AATAAA	-23	NA	34783284	34807477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34805806_34806189_34806347
ES.15031.12	chr17	+	7042	28	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	13	-8	intron_retention	FALSE	canonical	3	55	junction_11	11.5798652178533	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTATCTTCTGAGGGA	NA	False	NA	6	True	AATAAA	-15	NA	34783284	34807469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.15	chr17	+	6553	30	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	16.681388662372	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTTCTGAGGGACTAA	NA	False	NA	10	True	AATAAA	-19	NA	34783284	34807473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803834_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.16	chr17	+	7705	27	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	13	-9	intron_retention	FALSE	canonical	3	55	junction_11	11.3148198363471	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTATCTTCTGAGGG	NA	False	NA	5	True	AATAAA	-14	NA	34783284	34807468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34803606_34803754_34803825_34803964_34804104_34804878_34806189_34806347
ES.15031.17	chr17	+	8145	26	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	16	-7	intron_retention	FALSE	canonical	3	55	junction_11	11.899310904418	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783287	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34801897_34802323_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.18	chr17	+	6383	30	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	17.3554844892021	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783287	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802553_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.19	chr17	+	6353	30	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	20.8556558966034	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATCTTCTGAGGGACT	NA	False	NA	8	True	AATAAA	-17	NA	34783288	34807471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802514_34802802_34802979_34803385_34803606_34803754_34803834_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.2	chr17	+	6571	30	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.1867410112387	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783266	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784262_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.20	chr17	+	6964	29	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	17	-7	intron_retention	FALSE	canonical	3	55	junction_11	11.3024288522062	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783288	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.21	chr17	+	3205	19	NIC	ENSMUSG00000015468.15	novel	6380	31	NA	NA	18	-3646	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	17.6446403571547	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGGACATTGGTGTG	NA	False	NA	NA	False	TATAAA	-19	NA	34783289	34797799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34797577
ES.15031.23	chr17	+	6408	30	NNC	ENSMUSG00000015468.15	novel	804	5	NA	NA	273	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3252443090598	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783583	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783650_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.24	chr17	+	5496	25	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	4124	5	3256	-5	3prime_fragment	FALSE	canonical	3	55	junction_6	11.9160839018343	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTTCTGAGGGACTA	NA	False	NA	9	True	AATAAA	-18	NA	34787365	34807472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.25	chr17	+	2936	13	Fusion	ENSMUSG00000034786.18_ENSMUSG00000015468.15	novel	6380	31	NA	NA	3599	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	23.5366145021374	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAAGACTGGTATCTGG	NA	False	NA	3	True	AATAAA	-16	NA	34787708	34810726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794447_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34798347_34810648
ES.15031.26	chr17	+	5102	23	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	5766	6	4898	-6	3prime_fragment	FALSE	canonical	3	55	junction_4	12.2832446517015	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATCTTCTGAGGGACT	NA	False	NA	8	True	AATAAA	-17	NA	34789007	34807471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.27	chr17	+	4864	20	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-5484	-1	intron_retention	FALSE	canonical	3	55	junction_2	12.5238830012645	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCTGAGGGACTAAAGG	NA	False	NA	13	True	AATAAA	-22	NA	34791497	34807476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.28	chr17	+	4107	19	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-5282	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	20.5855636818321	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTTCTGAGGGACTA	NA	False	NA	9	True	AATAAA	-18	NA	34791699	34807472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.29	chr17	+	4663	19	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	9494	-115	-4246	115	3prime_fragment	FALSE	canonical	3	56	junction_16	11.8785001339436	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAATTCCAGTTCATC	NA	False	NA	NA	False	ATTAAA	-14	NA	34792735	34807592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.3	chr17	+	6198	27	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	17.7439463799938	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATCTTCTGAGGGACT	NA	False	NA	8	True	AATAAA	-17	NA	34783277	34807471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.30	chr17	+	4188	18	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-2913	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	20.7427812932246	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34794068	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34805052_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.31	chr17	+	4185	17	NNC	ENSMUSG00000015468.15	novel	6380	31	NA	NA	-2602	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.99414008846	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34794379	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34794534_34795326_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34800017_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802983_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.32	chr17	+	4102	16	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	12140	1	-1600	-1	3prime_fragment	FALSE	canonical	3	56	junction_13	12.2539789456323	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCTGAGGGACTAAAGG	NA	False	NA	13	True	AATAAA	-22	NA	34795381	34807476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.33	chr17	+	3261	13	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	2903	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	24.8260615751539	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34799884	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347_34806549_34806849
ES.15031.34	chr17	+	3279	9	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-1170	-9	intron_retention	FALSE	canonical	3	56	junction_6	13.3977610069743	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTATCTTCTGAGGG	NA	False	NA	5	True	AATAAA	-14	NA	34801685	34807468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34801897_34802323_34802708_34802802_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.35	chr17	+	3799	7	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	-1111	-6	intron_retention	FALSE	canonical	3	56	junction_4	12.9153225107062	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATCTTCTGAGGGACT	NA	False	NA	8	True	AATAAA	-17	NA	34801744	34807471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34802708_34802802_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.36	chr17	+	3514	4	FSM	ENSMUSG00000034786.18_ENSMUSG00000015468.15	ENSMUST00000038244.15	1343	4	-2172	1	593	-1	multi-exon	FALSE	canonical	2	5	junction_1	3.29983164553722	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACTGGTATCTGGG	NA	False	NA	4	True	AATAAA	-17	NA	34806607	34810727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
ES.15031.37	chr17	+	1283	4	FSM	ENSMUSG00000034786.18	ENSMUST00000150924.2	1019	4	-265	1	21	-1	multi-exon	FALSE	canonical	0	0	junction_2	4.92160768674447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACTGGTATCTGGG	NA	False	NA	4	True	AATAAA	-17	NA	34808800	34810727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34809235_34809434_34809538_34809753_34809916_34810143
ES.15031.38	chr17	+	1490	3	NIC	ENSMUSG00000034786.18	novel	1343	4	NA	NA	30	-1	intron_retention	FALSE	canonical	2	5	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACTGGTATCTGGG	NA	False	NA	4	True	AATAAA	-17	NA	34808809	34810727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34809235_34809434_34809916_34810143
ES.15031.39	chr17	+	1479	2	NIC	ENSMUSG00000034786.18	novel	1343	4	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACTGGTATCTGGG	NA	False	NA	4	True	AATAAA	-17	NA	34809020	34810727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34809916_34810143
ES.15031.4	chr17	+	6390	30	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	21.3897638514753	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783282	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800140_34800343_34800466_34801372_34801897_34802323_34802553_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.40	chr17	+	2063	9	FSM	ENSMUSG00000034673.15	ENSMUST00000173328.8	1990	9	-17	-56	-17	56	multi-exon	FALSE	canonical	0	0	junction_1	10.5289778706197	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTTTACCCACTTGA	NA	False	NA	22	True	AATAAA	-12	NA	34810222	34815637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34810467_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.41	chr17	+	3146	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-76	-2	-76	2	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGAGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-22	NA	34811160	34816376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.42	chr17	+	2400	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	-61	729	-61	64	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCACTTGAGAAGTAAG	NA	False	NA	30	True	AATAAA	-20	NA	34811175	34815645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.43	chr17	+	2213	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	8	847	8	-54	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTTCTGTTGGTAGTG	NA	False	NA	20	True	AAGAAA	-28	NA	34811244	34815527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.44	chr17	+	1828	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	18	1222	18	-49	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCAGTTGTGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	34811254	34815152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.45	chr17	+	2060	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	20	988	20	-4	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAGTGTCTGACTCGGA	NA	False	NA	NA	False	AATAGA	-13	NA	34811256	34815386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.46	chr17	+	2732	8	ISM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	1134	-1	2	1	3prime_fragment	FALSE	canonical	3	22	junction_2	4.16986271980755	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTTGAGATTTTTTTT	NA	False	NA	8	True	AATAAA	-21	NA	34812370	34816375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.47	chr17	+	2357	7	NNC	ENSMUSG00000034673.15	novel	3068	9	NA	NA	574	1	intron_retention	FALSE	canonical	0	0	junction_3	11.9117122568038	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTTGAGATTTTTTTT	NA	False	NA	8	True	AATAAA	-21	NA	34812942	34816375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34813089_34813211_34813403_34813555_34813692_34813798_34813929_34814238_34814328_34814601_34814689_34814797
ES.15031.5	chr17	+	6492	30	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2664645098709	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783282	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784497_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.6	chr17	+	4985	19	NNC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.7039687255283	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATCTTCTGAGGGAC	NA	False	NA	7	True	AATAAA	-16	NA	34783283	34807470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787585_34796941_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ES.15031.7	chr17	+	3919	20	ISM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	43	6447	13	-415	5prime_fragment	FALSE	canonical	3	55	junction_11	8.39997361821474	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCCTCCTGTTTACCCT	NA	False	NA	NA	False	AATAAA	-17	NA	34783284	34801030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352
ES.15031.9	chr17	+	6864	29	NIC	ENSMUSG00000015468.15	novel	6591	30	NA	NA	13	-1	intron_retention	FALSE	canonical	3	55	junction_11	11.1176454708867	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCTGAGGGACTAAAGG	NA	False	NA	13	True	AATAAA	-22	NA	34783284	34807476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805649_34806090_34806189_34806347
ES.15032.1	chr17	-	1308	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	-47	-23	-47	23	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGTGCCACTCTGACC	748	False	NA	0	True	NA	NA	NA	34822711	34820041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.10	chr17	-	1233	4	FSM	ENSMUSG00000015478.14	ENSMUST00000174475.8	850	4	-213	-170	72	-53	multi-exon	FALSE	canonical	3	1022	junction_3	37.7211994624891	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	896	False	NA	-76	True	NA	NA	NA	34822563	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.11	chr17	-	1067	6	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	72	-53	intron_retention	FALSE	canonical	2	78	junction_1	394.933614674669	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	896	False	NA	-76	True	NA	NA	NA	34822563	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820624_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.12	chr17	-	1055	6	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	92	-53	intron_retention	FALSE	canonical	2	14	junction_2	428.953890295915	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	916	False	NA	-76	True	NA	NA	NA	34822543	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820824_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.13	chr17	-	1081	6	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	93	-53	intron_retention	FALSE	canonical	0	0	junction_1	426.021314020789	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	917	False	NA	-76	True	NA	NA	NA	34822542	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820659_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.14	chr17	-	1076	6	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	72	-53	intron_retention	FALSE	non_canonical	0	0	junction_3	426.144388675951	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	896	False	NA	-76	True	NA	NA	NA	34822563	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820833_34820907_34820963_34821066_34821172_34821264_34821284_34822307
ES.15032.16	chr17	-	1149	4	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	75	-53	intron_retention	FALSE	non_canonical	0	0	junction_3	523.966283902568	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	899	False	NA	-76	True	NA	NA	NA	34822560	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820963_34821058_34821184_34822307
ES.15032.18	chr17	-	1003	6	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	82	-99	intron_retention	FALSE	canonical	3	19	junction_3	418.570615308815	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTCTCTTTCCATCCC	906	False	NA	-122	True	NA	NA	NA	34822553	34820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820833_34820907_34820938_34821058_34821172_34821264_34821284_34822307
ES.15032.19	chr17	-	1037	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	101	100	72	-100	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTCTTTCCATCC	896	False	NA	-123	True	NA	NA	NA	34822563	34820164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ES.15032.2	chr17	-	2045	5	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	470.136682253151	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	796	False	NA	-23	True	NA	NA	NA	34822663	34820064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821183_34821491
ES.15032.3	chr17	-	1182	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	17	junction_2	458.87927333886	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTCCCCAGTCTCTCC	795	False	NA	-24	True	NA	NA	NA	34822664	34820065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34820641_34820714_34820833_34821058_34821172_34821264_34821284_34822307
ES.15032.4	chr17	-	1344	4	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	-23	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	504.946421800263	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGTCTCCCCAGTCT	772	False	NA	-28	True	NA	NA	NA	34822687	34820069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820833_34820907_34821183_34822307
ES.15032.5	chr17	-	2396	2	ISM	ENSMUSG00000015478.14	ENSMUST00000174475.8	850	4	-212	-217	73	-6	intron_retention	FALSE	canonical	3	1111	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAAGTCTCCCCAGTC	897	False	NA	-29	True	NA	NA	NA	34822562	34820070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34820963_34821058
ES.15032.6	chr17	-	1231	5	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	-7	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	470.136682253151	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAAGTCTCCCCAGTC	788	False	NA	-29	True	NA	NA	NA	34822671	34820070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821183_34822307
ES.15032.7	chr17	-	1259	3	NNC	ENSMUSG00000015478.14	novel	850	4	NA	NA	83	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	555.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGGAAGTCTCCCCAG	907	False	NA	-31	True	NA	NA	NA	34822552	34820072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820963_34821058_34821183_34822307
ES.15032.8	chr17	-	2050	3	NNC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	85	-53	intron_retention	FALSE	non_canonical	0	0	junction_2	556	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	909	False	NA	-76	True	NA	NA	NA	34822550	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34820641_34820714_34821183_34821491
ES.15032.9	chr17	-	1168	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	63	-53	intron_retention	FALSE	canonical	3	1022	junction_4	36.6427005009183	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAATAATA	887	False	NA	-76	True	NA	NA	NA	34822572	34820117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34820641_34820714_34820963_34821058_34821172_34821264_34821284_34822307
ES.15033.1	chr17	+	2195	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	-6	1	-6	0	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGATATCCATATCT	NA	False	NA	43	True	AATAAA	-43	NA	34824828	34832422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.2	chr17	+	2094	7	FSM	ENSMUSG00000034254.18	ENSMUST00000173973.8	1105	7	-6	-983	-6	8	multi-exon	FALSE	canonical	1	5	junction_3	44.7688507781917	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCGGCCTGTTGTACT	NA	False	NA	21	True	AATAAA	-21	NA	34824828	34832400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34825146_34829418_34829619_34829845_34829901_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.3	chr17	+	2609	5	NIC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	25	-20	intron_retention	FALSE	canonical	3	118	junction_1	6.02079728939615	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAGAAAGAGAGA	NA	False	NA	-7	True	NA	NA	NA	34824859	34832372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34825146_34829418_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.4	chr17	+	2406	6	NIC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	27	6	intron_retention	FALSE	canonical	3	118	junction_1	5.38887743412299	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGCGGCCTGTTGTA	NA	False	NA	19	True	AATAAA	-19	NA	34824861	34832398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34825146_34829418_34829619_34829845_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.6	chr17	+	1425	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	37	728	37	-170	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTTTGTGTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	34824871	34831695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.7	chr17	+	2083	7	NNC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	46	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	46.6214066235196	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAGAAAGAGAGA	NA	False	NA	-7	True	NA	NA	NA	34824880	34832372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830677_34830776_34830841_34831226
ES.15033.8	chr17	+	1847	7	FSM	ENSMUSG00000034254.18	ENSMUST00000173973.8	1105	7	48	-790	48	-185	multi-exon	FALSE	canonical	1	5	junction_3	44.7688507781917	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTCTGAGCCAATTTTCA	NA	False	NA	NA	False	NA	NA	NA	34824882	34832207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34825146_34829418_34829619_34829845_34829901_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ES.15033.9	chr17	+	1861	6	NIC	ENSMUSG00000034254.18	novel	1105	7	NA	NA	48	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	49.990399078223	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTGCGGCCTGTTGT	NA	False	NA	18	True	AATAAA	-18	NA	34824882	34832397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34825146_34829418_34829619_34829845_34829901_34830578_34830675_34830764_34830841_34831226
ES.15034.1	chr17	-	1702	1	Genic_Genomic	ENSMUSG00000092176.2_ENSMUSG00000015467.15	novel	NA	NA	NA	NA	418	148	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAATTAAGCGCCCT	5563	False	NA	NA	False	NA	NA	NA	34833876	34832174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_34832200_34833900
ES.15035.1	chr17	+	1219	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	51	0	-26	0	multi-exon	FALSE	canonical	3	34	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7410	False	NA	4	True	ATTAAA	-17	NA	34863788	34865298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34863928_34864218
ES.15035.10	chr17	+	3008	17	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	352	junction_13	19.1894339416253	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9739	False	NA	9	True	AATAAA	-22	NA	34866117	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.13	chr17	+	3128	16	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	11	0	intron_retention	FALSE	canonical	3	352	junction_13	19.8153700164516	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9752	False	NA	11	True	AATAAA	-24	NA	34866130	34874048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872790_34872894_34872980_34873444
ES.15035.14	chr17	+	3024	17	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	16	-7	intron_retention	FALSE	canonical	2	10	junction_14	92.1799996948904	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGGCGGCCACCTT	9757	False	NA	4	True	AATAAA	-17	NA	34866135	34874041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872459_34872547_34872677_34872790_34872894
ES.15035.15	chr17	+	2507	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	122.217798668683	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9778	False	NA	9	True	AATAAA	-22	NA	34866156	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866696_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870720_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.16	chr17	+	2881	16	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	1	junction_1	97.0565470915452	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9786	False	NA	9	True	AATAAA	-22	NA	34866164	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.17	chr17	+	2667	17	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	2	junction_10	92.600620948242	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGCGGCCACCTTCCT	9792	False	NA	7	True	AATAAA	-20	NA	34866170	34874044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870808_34870896_34871621_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.18	chr17	+	2503	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	87.2084961417634	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9793	False	NA	9	True	AATAAA	-22	NA	34866171	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869968_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.19	chr17	+	3572	17	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	0	-2	intron_retention	FALSE	canonical	2	10	junction_13	91.8257308370045	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9796	False	NA	9	True	AATAAA	-22	NA	34866174	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872459_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.2	chr17	+	4647	19	Fusion	ENSMUSG00000015461.16_ENSMUSG00000033739.9	novel	2566	18	NA	NA	-26	-4	multi-exon	FALSE	non_canonical	0	0	junction_13	120.34882428247	345	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGCGGCCACCTTCCT	7410	False	NA	7	True	AATAAA	-20	NA	34863788	34874044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34863928_34864152_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871983_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.21	chr17	+	2289	16	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.6129505926727	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGGCGGCCACCTT	9797	False	NA	4	True	AATAAA	-17	NA	34866175	34874041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866276_34867590_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.23	chr17	+	3153	16	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	359	junction_8	18.205005416704	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9802	False	NA	11	True	AATAAA	-24	NA	34866180	34874048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.24	chr17	+	1679	11	ISM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	64	2734	-1	237	5prime_fragment	FALSE	canonical	3	325	junction_9	26.4688496161053	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGAGCAGTGACTTTT	9805	False	NA	NA	False	AATAAA	-15	NA	34866183	34871314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803
ES.15035.25	chr17	+	4123	13	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	3	-2	intron_retention	FALSE	canonical	3	325	junction_8	20.3858611133632	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9809	False	NA	9	True	AATAAA	-22	NA	34866187	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870896_34871621_34872071_34872187_34872790_34872894_34872980_34873444
ES.15035.27	chr17	+	2663	17	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	11	-4	intron_retention	FALSE	canonical	2	10	junction_13	92.4572325118484	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGCGGCCACCTTCCT	9817	False	NA	7	True	AATAAA	-20	NA	34866195	34874044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34872071_34872187_34872270_34872459_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.29	chr17	+	3293	15	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	17	0	intron_retention	FALSE	canonical	3	359	junction_8	17.8959578151729	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9823	False	NA	11	True	AATAAA	-24	NA	34866201	34874048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34872071_34872187_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.3	chr17	+	5699	17	Fusion	ENSMUSG00000015461.16_ENSMUSG00000033739.9	novel	2566	18	NA	NA	-26	8	intron_retention	FALSE	canonical	2	10	junction_13	120.967454300733	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCCTAGTGTGTGACGT	7410	False	NA	19	True	AATAAA	-32	NA	34863788	34874056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_34863928_34864218_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34871802_34871962_34872071_34872187_34872270_34872459_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.30	chr17	+	2389	17	ISM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	513	7	448	-7	3prime_fragment	FALSE	canonical	3	325	junction_8	23.5262486384889	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGGCGGCCACCTT	NA	False	NA	4	True	AATAAA	-17	NA	34866632	34874041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.31	chr17	+	2426	15	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	1026	-2	intron_retention	FALSE	canonical	3	325	junction_7	25.1352464130531	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	NA	False	NA	9	True	AATAAA	-22	NA	34867210	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872790_34872894_34872980_34873444
ES.15035.32	chr17	+	2460	13	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	1375	-7	intron_retention	FALSE	canonical	1	2	junction_6	104.133294654282	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGGCGGCCACCTT	NA	False	NA	4	True	AATAAA	-17	NA	34867559	34874041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34867643_34868091_34868228_34869274_34869361_34869473_34869826_34869959_34870094_34870535_34870722_34870808_34870896_34871621_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.4	chr17	+	1186	2	NNC	ENSMUSG00000033739.9	novel	1270	2	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGTCTGTGTTGTGG	7437	False	NA	5	True	ATTAAA	-18	NA	34863815	34865299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34863928_34864225
ES.15035.5	chr17	+	4634	17	ISM	ENSMUSG00000015461.16_ENSMUSG00000033739.9	ENSMUST00000015605.15	2566	18	-1603	0	702	0	intron_retention	FALSE	canonical	3	325	junction_9	23.4733059825411	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	8138	False	NA	11	True	AATAAA	-24	NA	34864516	34874048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894
ES.15035.6	chr17	+	2685	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	-119	0	-119	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9622	False	NA	11	True	AATAAA	-24	NA	34866000	34874048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.7	chr17	+	3193	16	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-28	-4	intron_retention	FALSE	canonical	3	352	junction_12	19.1334494769994	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGGCGGCCACCTTCCT	9713	False	NA	7	True	AATAAA	-20	NA	34866091	34874044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.8	chr17	+	2603	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	89.1133176972076	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCGGCCACCTTCCTAGT	9718	False	NA	10	True	AATAAA	-23	NA	34866096	34874047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870109_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ES.15035.9	chr17	+	2773	17	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	325	junction_9	22.5851686677341	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCGGCCACCTTCCTAG	9738	False	NA	9	True	AATAAA	-22	NA	34866116	34874046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872547_34872677_34872790_34872894_34872980_34873444
ES.15036.1	chr17	-	1689	9	NNC	ENSMUSG00000015474.17	novel	1729	9	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	27.1105952535167	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTTGGCTTATTCCCA	3982	False	NA	0	True	AATAAA	-17	NA	34846357	34835635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845540_34845778_34845970_34846220
ES.15036.10	chr17	-	1651	9	NIC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	22.80590658141	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	4188	False	NA	-4	True	AATAAA	-13	NA	34846151	34835639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846095
ES.15036.2	chr17	-	1730	9	FSM	ENSMUSG00000015474.17	ENSMUST00000166040.9	1139	9	-26	-565	-26	0	multi-exon	FALSE	canonical	3	10	junction_8	20.3312413541328	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	9996	False	NA	-2	True	AATAAA	-15	NA	34847039	34835637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846906
ES.15036.4	chr17	-	1825	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	-117	2	-27	0	multi-exon	FALSE	canonical	3	52	junction_2	7.8700381193486	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	3813	False	NA	-2	True	AATAAA	-15	NA	34846526	34835637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
ES.15036.5	chr17	-	1332	3	NNC	ENSMUSG00000015474.17	novel	1750	8	NA	NA	8638	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	28.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	2175	False	NA	-2	True	AATAAA	-15	NA	34837264	34835637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34836462_34836637_34836921_34837039
ES.15036.6	chr17	-	1852	10	NNC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-16898	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.7651194811604	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	NA	False	NA	-2	True	AATAAA	-15	NA	34864382	34835637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34856901_34857021_34864246
ES.15036.7	chr17	-	1675	7	FSM	ENSMUSG00000015474.17	ENSMUST00000169969.8	772	7	-255	-648	-33	-2	multi-exon	FALSE	canonical	0	0	junction_4	25.7601112834035	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	4182	False	NA	-4	True	AATAAA	-13	NA	34846157	34835639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844809_34844906_34845432_34845587_34845778
ES.15036.8	chr17	-	1701	9	NIC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-184	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_8	19.4148783153539	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	9889	False	NA	-4	True	AATAAA	-13	NA	34847197	34835639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34847091
ES.15036.9	chr17	-	1922	9	NNC	ENSMUSG00000015474.17	novel	1710	9	NA	NA	-35	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	23.4304155959727	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTGGCTTGGCTTATT	3805	False	NA	-4	True	AATAAA	-13	NA	34846534	34835639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34846061_34846298
ES.15037.1	chr17	-	3097	24	ISM	ENSMUSG00000073418.5	ENSMUST00000069507.9	5379	41	7490	4	-293	-4	3prime_fragment	TRUE	canonical	0	0	junction_3	1.2838976574116	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCCTCTTGTGTGTCTG	4222	False	NA	NA	False	AATAAA	-20	NA	34955366	34947357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_34947602_34947738_34947872_34948155_34948240_34948373_34948473_34948549_34948640_34948777_34948881_34949393_34949469_34949597_34949689_34949782_34949964_34950049_34950144_34951143_34951204_34951697_34951866_34951946_34952180_34952373_34952546_34952633_34952751_34952845_34953003_34953105_34953182_34953339_34953550_34953674_34953765_34953850_34953903_34954377_34954582_34954709_34954850_34955038_34955110_34955213
ES.15038.1	chr17	-	3095	1	Intergenic	novelGene_12546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	331	False	NA	NA	False	NA	NA	NA	34982153	34979058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_34979100_34982200
ES.15039.1	chr17	+	179	1	Intergenic	novelGene_12547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	5169	False	NA	NA	False	NA	NA	NA	35009880	35010059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35009900_35010100
ES.1504.1	chr1	-	3458	2	FSM	ENSMUSG00000079283.3	ENSMUST00000195075.2	970	2	-2487	-1	10	0	multi-exon	FALSE	canonical	3	59	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCCACAAGATGCACG	NA	False	NA	-1	True	ATTAAA	-16	NA	138784575	138779720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138779912_138781308
ES.1504.2	chr1	-	702	4	NNC	ENSMUSG00000079283.3	novel	1017	3	NA	NA	317	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.8128667266709	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGTCCACAAGATG	NA	False	NA	-5	True	ATTAAA	-12	NA	138784268	138779724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138779912_138781308_138781411_138782457_138782640_138784037
ES.1504.3	chr1	-	550	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	11	4	6	-3	multi-exon	FALSE	canonical	3	59	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGTCCACAAGATG	NA	False	NA	-5	True	ATTAAA	-12	NA	138784579	138779724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138779912_138781308_138781411_138784318
ES.1504.4	chr1	-	680	3	NNC	ENSMUSG00000079283.3	novel	1017	3	NA	NA	78	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	26.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCTGTTACGAATATT	NA	False	NA	-13	True	AATAAA	-13	NA	138784507	138779775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_138779912_138781308_138781411_138784065
ES.1504.5	chr1	-	3579	1	NIC	ENSMUSG00000079283.3	novel	565	3	NA	NA	5	-1231	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAACCAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	138784580	138781001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138781000_138784600
ES.1504.6	chr1	-	1139	1	NIC	ENSMUSG00000079283.3	novel	565	3	NA	NA	12	-3664	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATTGACAGCCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	138784573	138783434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_138783400_138784600
ES.15040.1	chr17	-	3772	24	NNC	ENSMUSG00000015451.17	novel	5371	41	NA	NA	-2164	0	intron_retention	TRUE	canonical	0	0	junction_7	1.96086474500516	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTGCGTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-23	NA	35036214	35028068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35028316_35028452_35028954_35029087_35029187_35029263_35029354_35029474_35029578_35030090_35030166_35030294_35030386_35030479_35030661_35030746_35031132_35031799_35031860_35032366_35032535_35032611_35032845_35033038_35033211_35033298_35033416_35033508_35033666_35033768_35033845_35034002_35034212_35034323_35034414_35034498_35034551_35035035_35035240_35035367_35035508_35035696_35035768_35035871_35035978_35036069
ES.15040.2	chr17	-	5003	15	NIC	ENSMUSG00000015451.17	novel	5165	40	NA	NA	-1789	-1	intron_retention	FALSE	canonical	0	0	junction_5	1.69030850945703	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTCTTGCGTGTCCGTC	NA	False	NA	NA	False	AATAAA	-22	NA	35035839	35028069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35028316_35028452_35028954_35029087_35029187_35029263_35030166_35030294_35030386_35030479_35030661_35030746_35030841_35031799_35031860_35032366_35032535_35032611_35033211_35033298_35033416_35033508_35034212_35034323_35034414_35034498_35035508_35035696
ES.15040.3	chr17	-	4638	31	NNC	ENSMUSG00000015451.17	novel	5357	42	NA	NA	3342	0	intron_retention	FALSE	canonical	0	0	junction_8	1.79783820802157	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTGCGTGTCCGT	9413	False	NA	NA	False	AATAAA	-21	NA	35039088	35028070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35028316_35028452_35028586_35028869_35028954_35029087_35029187_35029263_35029354_35029474_35029744_35030090_35030166_35030294_35030386_35030479_35030661_35030746_35030841_35031799_35031860_35032366_35032535_35032611_35032845_35033038_35033211_35033298_35033416_35033508_35033666_35033768_35033845_35034002_35034212_35034323_35034414_35034498_35034551_35035035_35035240_35035367_35035508_35035696_35035768_35035871_35035978_35036069_35036592_35036803_35036931_35037352_35037512_35038154_35038341_35038434_35038621_35038761_35038939_35039023
ES.15040.4	chr17	-	2017	8	NIC	ENSMUSG00000015451.17	novel	5165	40	NA	NA	-248	0	intron_retention	FALSE	canonical	0	0	junction_6	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTCTTGCGTGTCCGT	NA	False	NA	NA	False	AATAAA	-21	NA	35031481	35028070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35028316_35028452_35028954_35029087_35029187_35029263_35029354_35030090_35030166_35030294_35030386_35030479_35030661_35030746
ES.15041.2	chr17	-	1305	6	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	82	junction_5	4.14728827066554	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	5576	False	NA	-5	True	AATAAA	-15	NA	35055918	35042969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ES.15041.3	chr17	-	1397	6	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	81	junction_1	4.95580467734555	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	5588	False	NA	-5	True	AATAAA	-15	NA	35055906	35042969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051518_35055405_35055543_35055752
ES.15041.4	chr17	-	3292	1	NIC	ENSMUSG00000061207.12	novel	1120	7	NA	NA	-834	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	9051	False	NA	-5	True	AATAAA	-15	NA	35046261	35042969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35043000_35046300
ES.15041.5	chr17	-	2181	2	ISM	ENSMUSG00000061207.12	ENSMUST00000162055.8	587	5	6132	-195	88	0	intron_retention	FALSE	canonical	3	81	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	9973	False	NA	-5	True	AATAAA	-15	NA	35045339	35042969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_35043301_35043489
ES.15041.6	chr17	-	1141	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	-22	1	-22	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	5551	False	NA	-5	True	AATAAA	-15	NA	35055943	35042969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ES.15042.1	chr17	+	1626	5	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	-18	-7	intron_retention	FALSE	canonical	3	133	junction_1	19.5064092031312	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	2958	False	NA	23	True	AATAAA	-12	NA	35055976	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788
ES.15042.10	chr17	+	1536	6	NNC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	24	-7	intron_retention	FALSE	canonical	2	5	junction_2	66.415058533438	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3000	False	NA	23	True	AATAAA	-12	NA	35056018	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35056193_35056368_35056762_35056876_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.11	chr17	+	1493	6	ISM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	26	7	26	-7	intron_retention	FALSE	canonical	3	133	junction_1	18.2054936763604	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3002	False	NA	23	True	AATAAA	-12	NA	35056020	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788
ES.15042.12	chr17	+	1814	4	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	152	junction_1	15.4560308258262	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	3020	False	NA	30	True	AATAAA	-19	NA	35056038	35058162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.13	chr17	+	1556	6	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	41	junction_1	48.3363217466948	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	3021	False	NA	30	True	AATAAA	-19	NA	35056039	35058162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057884_35057962
ES.15042.14	chr17	+	1496	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	-17	6	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCTGAATGGAGTCA	3022	False	NA	36	True	AATAAA	-25	NA	35056040	35058168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.15	chr17	+	1547	6	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	12	-1	intron_retention	FALSE	canonical	3	143	junction_2	17.7696370249929	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCTGTGTCTGAAT	3051	False	NA	29	True	AATAAA	-18	NA	35056069	35058161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.16	chr17	+	1623	5	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	19	-7	intron_retention	FALSE	canonical	3	152	junction_1	16.3458710382775	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3058	False	NA	23	True	AATAAA	-12	NA	35056076	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.2	chr17	+	1675	5	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	0	-7	intron_retention	FALSE	canonical	3	133	junction_1	22.1189963605947	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	2976	False	NA	23	True	AATAAA	-12	NA	35055994	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056193_35056368_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.3	chr17	+	1472	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	0	47	0	0	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2976	False	NA	30	True	AATAAA	-19	NA	35055994	35058162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.4	chr17	+	1448	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	1	-2	1	2	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCTGTGTCTGAATGGA	2977	False	NA	32	True	AATAAA	-21	NA	35055995	35058164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.5	chr17	+	1679	5	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	4	-7	intron_retention	FALSE	canonical	3	41	junction_1	53.8069465775563	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	2980	False	NA	23	True	AATAAA	-12	NA	35055998	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056218_35056368_35056731_35056876_35057422_35057523_35057884_35057962
ES.15042.6	chr17	+	1957	3	NIC	ENSMUSG00000040482.17	novel	701	5	NA	NA	23	-7	intron_retention	FALSE	canonical	3	152	junction_1	15	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	2999	False	NA	23	True	AATAAA	-12	NA	35056017	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35057422_35057523_35057884_35057962
ES.15042.7	chr17	+	1761	4	NIC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	23	-7	intron_retention	FALSE	canonical	3	152	junction_1	16.4991582276861	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	2999	False	NA	23	True	AATAAA	-12	NA	35056017	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35056731_35056876_35057422_35057523_35057660_35057788
ES.15042.8	chr17	+	1472	7	NNC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	24	-7	intron_retention	FALSE	canonical	2	5	junction_2	69.9229734938541	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3000	False	NA	23	True	AATAAA	-12	NA	35056018	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35056218_35056368_35056762_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ES.15042.9	chr17	+	1623	6	NNC	ENSMUSG00000040482.17	novel	1519	7	NA	NA	24	-7	intron_retention	FALSE	canonical	2	5	junction_1	66.5714653586655	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	3000	False	NA	23	True	AATAAA	-12	NA	35056018	35058155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35056762_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ES.15043.1	chr17	+	1781	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	-465	65	-448	53	multi-exon	TRUE	canonical	3	201	junction_1	101.735146335964	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGCTGTCAGTGTTG	5	True	NA	83	True	NA	NA	NA	35068918	35075283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.11	chr17	+	1535	10	NIC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	4	-7	intron_retention	FALSE	canonical	3	266	junction_1	87.9077799616039	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCACCTCCGTCAG	8	False	NA	23	True	AGTAAA	-13	NA	35069387	35075223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.12	chr17	+	4867	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	20	-3488	10	3370	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGACATTGTTTAACTT	14	False	NA	NA	False	NA	NA	NA	35069393	35078718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.13	chr17	+	1461	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	30	116	13	-1	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTCCGTCAGCCTCTA	17	False	NA	29	True	AGTAAA	-19	NA	35069396	35075229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.14	chr17	+	1701	10	NIC	ENSMUSG00000024369.17	novel	1607	11	NA	NA	15	5	intron_retention	FALSE	canonical	3	434	junction_4	41.3533404386163	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCAGCCTCTAGTCTTT	19	False	NA	35	True	AGTAAA	-25	NA	35069398	35075235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.15	chr17	+	1452	10	NIC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	15	-1	intron_retention	FALSE	canonical	3	266	junction_1	84.6309344254711	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTCCGTCAGCCTCTA	19	False	NA	29	True	AGTAAA	-19	NA	35069398	35075229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073476_35073671_35073775_35075063
ES.15043.16	chr17	+	1476	11	NNC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	169.705156079596	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTATTGTAACTGCTT	19	False	NA	NA	False	AAAAAG	-12	NA	35069398	35075347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072798_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.17	chr17	+	4947	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	33	-3373	16	3370	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGACATTGTTTAACTT	20	False	NA	NA	False	NA	NA	NA	35069399	35078718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.18	chr17	+	1722	9	NIC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	27	7	intron_retention	FALSE	canonical	3	266	junction_1	92.3985930628816	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	1	True	NA	37	True	AGTAAA	-27	NA	35069410	35075237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35073110_35073196_35073342_35073420_35073775_35075063
ES.15043.19	chr17	+	1348	11	NNC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	33	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	169.705156079596	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	7	False	NA	37	True	AGTAAA	-27	NA	35069416	35075237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072798_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.2	chr17	+	1381	11	NNC	ENSMUSG00000024369.17	novel	1381	11	NA	NA	-117	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	177.443765740023	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTCCGTCAGCCTCTA	336	False	NA	29	True	AGTAAA	-19	NA	35069249	35075229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072798_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.20	chr17	+	1502	9	NIC	ENSMUSG00000024369.17	novel	1381	11	NA	NA	33	2	intron_retention	FALSE	canonical	3	201	junction_1	111.688671650262	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCGTCAGCCTCTAGTC	7	False	NA	32	True	AGTAAA	-22	NA	35069416	35075232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.21	chr17	+	1605	9	NIC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	47	-7	intron_retention	FALSE	canonical	3	266	junction_1	90.6076707569508	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCACCTCCGTCAG	21	False	NA	23	True	AGTAAA	-13	NA	35069430	35075223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.22	chr17	+	2715	9	NIC	ENSMUSG00000024369.17	novel	1399	11	NA	NA	69	-7	intron_retention	FALSE	canonical	3	266	junction_1	91.6879899441579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCACCTCCGTCAG	-9	True	NA	23	True	AGTAAA	-13	NA	35069452	35075223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671
ES.15043.4	chr17	+	4785	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	-29	-3375	-12	3375	multi-exon	FALSE	canonical	3	201	junction_1	101.735146335964	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGTTTAACTTTTGTT	20	False	NA	NA	False	NA	NA	NA	35069354	35078723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.5	chr17	+	1405	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	1	-7	1	7	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGCCTCTAGTCTTTCA	-5	True	NA	37	True	AGTAAA	-27	NA	35069374	35075237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.6	chr17	+	1527	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	1	-129	1	11	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTTAATCTGTCCTC	-5	True	NA	NA	False	AAAAAG	-24	NA	35069374	35075359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.7	chr17	+	1593	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	18	-4	1	1	multi-exon	FALSE	canonical	3	52	junction_1	144.013228559046	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTGTAACTGCTTTA	5	True	NA	NA	False	AAAAAG	-14	NA	35069384	35075349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.8	chr17	+	1827	10	NIC	ENSMUSG00000024369.17	novel	1607	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	434	junction_4	41.3533404386163	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTATTGTAACTGCTT	5	True	NA	NA	False	AAAAAG	-12	NA	35069384	35075347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ES.15043.9	chr17	+	4751	2	NIC	ENSMUSG00000024369.17	novel	1381	11	NA	NA	1	507	intron_retention	FALSE	canonical	3	514	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCATTTGGAAAAACAGAAC	5	True	NA	NA	False	AAAAAG	-14	NA	35069384	35074237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35071390_35071491
ES.15044.1	chr17	-	4135	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	-161	-23	-161	7	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGGTGACTCCATTCA	5144	False	NA	0	True	AATAAA	-36	NA	35069347	35058196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.10	chr17	-	4517	25	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	23	-2	intron_retention	FALSE	canonical	3	90	junction_17	16.4734108152771	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5346	False	NA	-25	True	AATAAA	-11	NA	35069145	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.11	chr17	-	3942	28	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	27.3120965376873	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5305	False	NA	-25	True	AATAAA	-11	NA	35069186	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060778_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.12	chr17	-	4701	24	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	88	junction_16	15.8805798582785	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5299	False	NA	-25	True	AATAAA	-11	NA	35069192	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.13	chr17	-	5097	21	NNC	ENSMUSG00000040356.17	novel	4119	26	NA	NA	13	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	29.5167748915765	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5336	False	NA	-25	True	AATAAA	-11	NA	35069155	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061791_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.14	chr17	-	3804	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.7117720056352	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5303	False	NA	-25	True	AATAAA	-11	NA	35069188	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.15	chr17	-	4873	22	NIC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	0	-2	intron_retention	FALSE	canonical	3	90	junction_14	15.5284830826476	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5323	False	NA	-25	True	AATAAA	-11	NA	35069168	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064889_35065002_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.16	chr17	-	4946	23	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	3	-2	intron_retention	FALSE	canonical	3	91	junction_15	16.2442615423986	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	5308	False	NA	-25	True	AATAAA	-11	NA	35069183	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.17	chr17	-	3491	15	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	236	-2	intron_retention	FALSE	canonical	3	91	junction_14	17.375798322579	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTGGAGTATGGTAA	9112	False	NA	-25	True	AATAAA	-11	NA	35065379	35058221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803
ES.15044.18	chr17	-	3972	25	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	6	2	intron_retention	FALSE	canonical	0	0	junction_17	28.0856823943367	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5311	False	NA	-26	True	AATAAA	-10	NA	35069180	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065388_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.19	chr17	-	4136	26	NIC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	8	2	intron_retention	FALSE	canonical	3	90	junction_18	16.190169857046	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5331	False	NA	-26	True	AATAAA	-10	NA	35069160	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.2	chr17	-	4425	23	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	-1205	0	intron_retention	FALSE	canonical	0	0	junction_16	29.6589428766769	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGAACAGAGGTGACT	7117	False	NA	-7	True	AATAAA	-29	NA	35067374	35058203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065388_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300
ES.15044.20	chr17	-	3855	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	27.7357831805603	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5323	False	NA	-26	True	AATAAA	-10	NA	35069168	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.21	chr17	-	4548	22	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_10	29.4612239871473	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5323	False	NA	-26	True	AATAAA	-10	NA	35069168	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064889_35065002_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.24	chr17	-	3401	24	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-764	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	28.1817621916523	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	7558	False	NA	-26	True	AATAAA	-10	NA	35066933	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059562_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879
ES.15044.25	chr17	-	4002	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	13	2	intron_retention	FALSE	canonical	3	88	junction_19	16.0408594407417	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5336	False	NA	-26	True	AATAAA	-10	NA	35069155	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.26	chr17	-	4056	28	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.226831499761	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTGGAGTATGGTA	5299	False	NA	-26	True	AATAAA	-10	NA	35069192	35058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066280_35066383_35066438_35066599_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.27	chr17	-	3776	27	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	34.629996915832	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCTTGGAGTATGGT	5326	False	NA	-27	True	AATAAA	-9	NA	35069165	35058223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065842_35065968_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.28	chr17	-	5136	22	NIC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	1	0	intron_retention	FALSE	canonical	3	90	junction_14	16.1406797239185	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGCTTGGAGTATGG	5306	False	NA	-28	True	AATAAA	-8	NA	35069185	35058224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064889_35065002_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.29	chr17	-	4338	25	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	21	0	intron_retention	FALSE	canonical	3	91	junction_15	15.0830455773656	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGCTTGGAGTATGG	5344	False	NA	-28	True	AATAAA	-8	NA	35069147	35058224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.3	chr17	-	3702	26	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	35.4941347267404	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGAACAGAGGTGACT	5314	False	NA	-7	True	AATAAA	-29	NA	35069177	35058203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35068871_35068976_35069109
ES.15044.30	chr17	-	3919	28	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	27.0668024890671	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAAAATATAAATAAAG	5317	False	NA	-54	True	ACTAAA	-26	NA	35069174	35058250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064792_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.31	chr17	-	3743	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.6202752287507	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5305	False	NA	-90	True	GATAAA	-32	NA	35069186	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.32	chr17	-	3375	17	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	-267	-14	intron_retention	FALSE	canonical	0	0	junction_15	42.6031377218862	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	8609	False	NA	-90	True	GATAAA	-32	NA	35065882	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35065388_35065497_35065568_35065842
ES.15044.33	chr17	-	4580	24	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-4	-14	intron_retention	FALSE	canonical	3	88	junction_16	15.5339739869129	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5313	False	NA	-90	True	GATAAA	-32	NA	35069178	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064889_35065002_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.34	chr17	-	4372	26	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-1	-14	intron_retention	FALSE	canonical	0	0	junction_17	27.8854800926934	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5316	False	NA	-90	True	GATAAA	-32	NA	35069175	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35065388_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.35	chr17	-	3455	15	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	259	-14	intron_retention	FALSE	canonical	3	91	junction_13	17.4626423416109	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	9135	False	NA	-90	True	GATAAA	-32	NA	35065356	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002
ES.15044.36	chr17	-	4015	27	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	21	-14	intron_retention	FALSE	canonical	0	0	junction_1	26.6763696597729	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5344	False	NA	-90	True	GATAAA	-32	NA	35069147	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058605_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.37	chr17	-	4222	22	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-967	-14	intron_retention	FALSE	canonical	3	91	junction_16	16.6170690594636	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	7355	False	NA	-90	True	GATAAA	-32	NA	35067136	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083
ES.15044.38	chr17	-	4544	25	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	1	-14	intron_retention	FALSE	canonical	3	88	junction_17	16.6094329791504	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5306	False	NA	-90	True	GATAAA	-32	NA	35069185	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.39	chr17	-	4710	23	NIC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	0	-14	intron_retention	FALSE	canonical	3	91	junction_15	15.5747331935281	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5323	False	NA	-90	True	GATAAA	-32	NA	35069168	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.4	chr17	-	3900	28	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4884994585675	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGGAACAGAGGTGAC	5344	False	NA	-8	True	AATAAA	-28	NA	35069147	35058204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058693_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.40	chr17	-	3895	28	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.2156454640468	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5303	False	NA	-90	True	GATAAA	-32	NA	35069188	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063304_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.41	chr17	-	4612	23	NIC	ENSMUSG00000040356.17	novel	4520	24	NA	NA	2	-14	intron_retention	FALSE	canonical	3	90	junction_15	15.6551156057085	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5325	False	NA	-90	True	GATAAA	-32	NA	35069166	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.43	chr17	-	3930	27	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	-2	-14	intron_retention	TRUE	canonical	0	0	junction_7	27.669328072368	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5303	False	NA	-90	True	GATAAA	-32	NA	35069188	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060172_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.44	chr17	-	4089	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-133	-14	intron_retention	FALSE	canonical	3	88	junction_19	16.5010309880516	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5172	False	NA	-90	True	GATAAA	-32	NA	35069319	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.45	chr17	-	4355	25	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	0	-14	intron_retention	FALSE	canonical	2	5	junction_17	27.2579944949897	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5320	False	NA	-90	True	GATAAA	-32	NA	35069171	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065568_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.46	chr17	-	5282	20	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-104	-14	intron_retention	FALSE	canonical	3	96	junction_11	15.1872887511955	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5201	False	NA	-90	True	GATAAA	-32	NA	35069290	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064889_35065002_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.47	chr17	-	4911	22	NIC	ENSMUSG00000040356.17	novel	4119	26	NA	NA	24	-14	intron_retention	FALSE	canonical	3	91	junction_13	15.4503080273692	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5347	False	NA	-90	True	GATAAA	-32	NA	35069144	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.48	chr17	-	4187	26	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	23	-14	intron_retention	FALSE	canonical	2	5	junction_17	27.0026369082725	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	5346	False	NA	-90	True	GATAAA	-32	NA	35069145	35058286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064889_35065002_35065568_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.49	chr17	-	4070	27	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	23	-16	intron_retention	FALSE	canonical	0	0	junction_17	34.1811438035063	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAACTAAAAACAAAC	5346	False	NA	-92	True	GATAAA	-30	NA	35069145	35058288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065388_35065497_35065568_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.5	chr17	-	4304	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	-191	-1	intron_retention	FALSE	canonical	3	90	junction_19	16.3224262177268	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGGAACAGAGGTGAC	5114	False	NA	-8	True	AATAAA	-28	NA	35069377	35058204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.6	chr17	-	4253	27	NNC	ENSMUSG00000040356.17	novel	3995	27	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_17	27.6923076923077	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTTGGAACAGAGGTGA	5322	False	NA	-9	True	AATAAA	-27	NA	35069169	35058205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065388_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.7	chr17	-	4324	27	NNC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_18	27.4838306417712	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5317	False	NA	-23	True	AATAAA	-13	NA	35069174	35058219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065388_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15044.9	chr17	-	4018	27	FSM	ENSMUSG00000040356.17	ENSMUST00000174887.8	3995	27	-18	-5	0	0	multi-exon	FALSE	canonical	3	88	junction_19	16.7468534534615	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5305	False	NA	-23	True	AATAAA	-13	NA	35069186	35058219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ES.15045.1	chr17	-	2583	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	58	0	-16	0	multi-exon	TRUE	canonical	1	4	junction_13	3.65842630716852	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTCTTATGTCTT	NA	False	NA	0	True	AATAAA	-18	NA	35101018	35081580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
ES.15045.2	chr17	-	2550	18	NNC	ENSMUSG00000024371.15	novel	2641	18	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.280801270273	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCTGTCTTATGT	NA	False	NA	-3	True	AATAAA	-15	NA	35100994	35081583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083026_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
ES.15045.3	chr17	-	4103	16	NIC	ENSMUSG00000024371.15	novel	2641	18	NA	NA	17	-2	intron_retention	FALSE	canonical	0	0	junction_3	4.23739962188552	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCTGTCTTATGT	NA	False	NA	-3	True	AATAAA	-15	NA	35100985	35081583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35082008_35082154_35082205_35082320_35082451_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
ES.15045.4	chr17	-	1985	15	NNC	ENSMUSG00000024371.15	novel	2157	16	NA	NA	5525	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.21610130382106	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATCCTGTCTGTCTTAT	NA	False	NA	-5	True	AATAAA	-13	NA	35095418	35081585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082859_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309
ES.15046.1	chr17	+	3927	27	Fusion	ENSMUSG00000049823.10_ENSMUSG00000013787.16	novel	4026	27	NA	NA	-8	0	multi-exon	TRUE	canonical	0	0	junction_1	99.7840271336346	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	2752	False	NA	19	True	AATAAA	-20	NA	35113526	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_35113746_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.10	chr17	+	7169	21	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	5	0	intron_retention	FALSE	canonical	3	141	junction_1	82.356830317831	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6675	False	NA	19	True	AATAAA	-20	NA	35117449	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118893_35121989_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126821_35127149_35127255_35127379_35127535_35127613_35129812_35129953_35131444_35131609_35131786_35132615
ES.15046.11	chr17	+	3712	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	103.344199975804	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAACTGTCTGGTGAT	6676	False	NA	11	True	AATAAA	-12	NA	35117450	35133019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.12	chr17	+	3809	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	106.59069116854	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6676	False	NA	19	True	AATAAA	-20	NA	35117450	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127290_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.15	chr17	+	3692	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_26	100.759835146244	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6678	False	NA	13	True	AATAAA	-14	NA	35117452	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35132615
ES.15046.16	chr17	+	3561	26	ISM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-22	1037	8	-1034	5prime_fragment	FALSE	canonical	3	123	junction_9	83.3571208715848	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGGCTTCCTTTGGTGT	6678	False	NA	NA	False	NA	NA	NA	35117452	35131986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609
ES.15046.18	chr17	+	3692	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	8	-1035	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	98.7798939846632	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCCGGCTTCCTTTGGTG	6678	False	NA	NA	False	NA	NA	NA	35117452	35131985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609
ES.15046.2	chr17	+	1937	3	NNC	ENSMUSG00000049823.10	novel	1858	2	NA	NA	67	499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAAAAACA	2827	False	NA	-22	True	NA	NA	NA	35113601	35116342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35113746_35114196_35115886_35116238
ES.15046.20	chr17	+	3794	27	NIC	ENSMUSG00000013787.16	novel	3746	27	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	102.816613040694	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6682	False	NA	15	True	AATAAA	-16	NA	35117456	35133023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.21	chr17	+	3652	26	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_22	104.421331154128	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6682	False	NA	19	True	AATAAA	-20	NA	35117456	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.24	chr17	+	3968	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	13	1	intron_retention	FALSE	canonical	3	35	junction_13	99.1107876310751	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6683	False	NA	13	True	AATAAA	-14	NA	35117457	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.25	chr17	+	3635	26	NIC	ENSMUSG00000013787.16	novel	3746	27	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	122.626261461401	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6683	False	NA	13	True	AATAAA	-14	NA	35117457	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.26	chr17	+	3753	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_23	100.300406767037	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6683	False	NA	19	True	AATAAA	-20	NA	35117457	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.27	chr17	+	3805	26	NNC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.559459458088	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6684	False	NA	19	True	AATAAA	-20	NA	35117458	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118930_35122278_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.3	chr17	+	413	1	Intergenic	novelGene_12548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAAAAACA	5155	False	NA	-22	True	NA	NA	NA	35115929	35116342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35115900_35116300
ES.15046.31	chr17	+	5900	23	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-9	0	intron_retention	FALSE	canonical	3	123	junction_8	86.3063446333289	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6691	False	NA	19	True	AATAAA	-20	NA	35117465	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.32	chr17	+	3649	27	ISM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	22	1041	-8	-1034	5prime_fragment	FALSE	canonical	3	141	junction_1	79.430070468775	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGGCTTCCTTTGGTGT	6692	False	NA	NA	False	NA	NA	NA	35117466	35131986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609
ES.15046.34	chr17	+	3925	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-5	0	intron_retention	FALSE	canonical	3	141	junction_1	78.8084431394199	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	6695	False	NA	12	True	AATAAA	-13	NA	35117469	35133020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.36	chr17	+	3829	26	NIC	ENSMUSG00000013787.16	novel	3746	27	NA	NA	-3	1	intron_retention	FALSE	canonical	3	123	junction_9	85.2463348185715	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6697	False	NA	13	True	AATAAA	-14	NA	35117471	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.37	chr17	+	4010	26	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-3	1	intron_retention	FALSE	canonical	2	6	junction_25	116.992485228753	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6697	False	NA	13	True	AATAAA	-14	NA	35117471	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130455_35130554_35130642_35131364_35131444_35132615
ES.15046.39	chr17	+	4198	26	NIC	ENSMUSG00000013787.16	novel	3746	27	NA	NA	-1	1	intron_retention	FALSE	canonical	3	141	junction_1	72.1678487970925	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6699	False	NA	13	True	AATAAA	-14	NA	35117473	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.4	chr17	+	3947	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	-197	-4	-167	0	multi-exon	FALSE	canonical	3	123	junction_9	83.6524314646073	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6503	False	NA	19	True	AATAAA	-20	NA	35117277	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.40	chr17	+	4029	27	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	83	1	intron_retention	FALSE	non_canonical	0	0	junction_1	113.365128531061	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6783	False	NA	13	True	AATAAA	-14	NA	35117557	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35117590_35118136_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124371_35124456_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.41	chr17	+	4388	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	-361	-1	111	0	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	6811	False	NA	20	True	AATAAA	-21	NA	35117585	35133028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.42	chr17	+	3965	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	-24	-7	-24	0	multi-exon	FALSE	canonical	3	123	junction_8	74.3555135817109	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7131	False	NA	19	True	AATAAA	-20	NA	35117905	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.43	chr17	+	3941	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_22	95.0290397720613	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7135	False	NA	13	True	AATAAA	-14	NA	35117909	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.45	chr17	+	3965	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	97.0906051067764	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7161	False	NA	19	True	AATAAA	-20	NA	35117935	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.46	chr17	+	4538	24	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-7	0	intron_retention	FALSE	canonical	3	188	junction_9	71.1604858387119	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7165	False	NA	19	True	AATAAA	-20	NA	35117939	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.48	chr17	+	4107	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-6	0	intron_retention	FALSE	canonical	3	188	junction_8	68.4104787295046	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7166	False	NA	19	True	AATAAA	-20	NA	35117940	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.49	chr17	+	4037	27	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	111.958446697792	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7167	False	NA	19	True	AATAAA	-20	NA	35117941	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124609_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.5	chr17	+	4078	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-166	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6504	False	NA	19	True	AATAAA	-20	NA	35117278	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.50	chr17	+	4061	27	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	93.2398764274868	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7167	False	NA	19	True	AATAAA	-20	NA	35117941	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.51	chr17	+	3772	25	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	101.553959042581	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7168	False	NA	19	True	AATAAA	-20	NA	35117942	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.52	chr17	+	4005	27	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.0001323574288	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7169	False	NA	19	True	AATAAA	-20	NA	35117943	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124609_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.53	chr17	+	4010	28	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	111.854378190748	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7173	False	NA	13	True	AATAAA	-14	NA	35117947	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124165_35124203_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.54	chr17	+	4205	25	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	1	1	intron_retention	FALSE	canonical	3	188	junction_8	70.2960875906729	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7173	False	NA	13	True	AATAAA	-14	NA	35117947	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.55	chr17	+	3996	25	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	123	junction_7	72.0601600516309	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7175	False	NA	19	True	AATAAA	-20	NA	35117949	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.59	chr17	+	3839	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_25	95.6876083931457	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7183	False	NA	19	True	AATAAA	-20	NA	35117957	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35132615
ES.15046.6	chr17	+	4427	26	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	-144	1	intron_retention	FALSE	canonical	3	141	junction_1	80.3176095261805	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	6526	False	NA	13	True	AATAAA	-14	NA	35117300	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.60	chr17	+	3765	25	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	37	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_21	99.1856336903463	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7209	False	NA	13	True	AATAAA	-14	NA	35117983	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.62	chr17	+	3788	25	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	44	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_21	116.016274899975	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7216	False	NA	13	True	AATAAA	-14	NA	35117990	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.63	chr17	+	3981	26	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	113	0	intron_retention	FALSE	canonical	0	0	junction_1	97.6514290730044	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7285	False	NA	19	True	AATAAA	-20	NA	35118059	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118230_35118342_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.65	chr17	+	3655	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	215	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	97.6172443782347	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7387	False	NA	19	True	AATAAA	-20	NA	35118161	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.66	chr17	+	3637	25	ISM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	404	-1	-336	1	3prime_fragment	FALSE	canonical	3	123	junction_7	75.5527777267138	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7559	False	NA	13	True	AATAAA	-14	NA	35118333	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.67	chr17	+	3426	24	NNC	ENSMUSG00000013787.16	novel	3934	26	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	105.385385111433	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	7860	False	NA	12	True	AATAAA	-13	NA	35118634	35133020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126040_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.68	chr17	+	3530	25	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	688	7	-35	0	3prime_fragment	FALSE	canonical	3	188	junction_7	72.7634938802877	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	7860	False	NA	12	True	AATAAA	-13	NA	35118634	35133020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.69	chr17	+	3357	24	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	114.329127252745	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	7929	False	NA	13	True	AATAAA	-14	NA	35118703	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124918_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.7	chr17	+	3885	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	-1	-2	-1	1	multi-exon	FALSE	canonical	3	141	junction_1	79.9703820344975	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGATTGTTTCAGGA	6669	False	NA	21	True	AATAAA	-22	NA	35117443	35133029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.70	chr17	+	3744	23	ISM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	3493	-7	2753	0	3prime_fragment	FALSE	canonical	3	123	junction_5	77.803644032869	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	NA	False	NA	19	True	AATAAA	-20	NA	35121422	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.71	chr17	+	3282	24	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	4040	0	-2192	0	3prime_fragment	FALSE	canonical	3	188	junction_6	73.7587135604123	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	440	False	NA	19	True	AATAAA	-20	NA	35121986	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.74	chr17	+	3194	23	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	4208	6	-2024	1	3prime_fragment	FALSE	canonical	3	188	junction_5	74.6246253641772	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	608	False	NA	13	True	AATAAA	-14	NA	35122154	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.75	chr17	+	3545	21	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-2024	1	intron_retention	FALSE	canonical	3	240	junction_3	59.9827266802702	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	608	False	NA	13	True	AATAAA	-14	NA	35122154	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35122196_35122298_35122455_35124104_35124243_35124317_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.76	chr17	+	3213	22	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	4298	0	-1934	0	3prime_fragment	FALSE	canonical	3	188	junction_4	75.3019319299376	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	698	False	NA	19	True	AATAAA	-20	NA	35122244	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.77	chr17	+	2989	21	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-1855	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.537560938009	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	777	False	NA	13	True	AATAAA	-14	NA	35122323	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125389_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.78	chr17	+	2978	23	NNC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-1750	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.754336780776	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	882	False	NA	13	True	AATAAA	-14	NA	35122428	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35122455_35124104_35124138_35124182_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.79	chr17	+	2997	21	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	6156	8	-76	-1	3prime_fragment	FALSE	canonical	3	188	junction_3	73.6810694819232	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAACTGTCTGGTGAT	1066	False	NA	11	True	AATAAA	-12	NA	35124102	35133019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.8	chr17	+	3619	26	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	107.302294476866	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6675	False	NA	19	True	AATAAA	-20	NA	35117449	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.80	chr17	+	7011	11	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	26	0	intron_retention	FALSE	canonical	3	123	junction_1	85.8859709149288	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	1205	False	NA	19	True	AATAAA	-20	NA	35124241	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35124433_35124885_35125035_35125126_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35129812_35129953
ES.15046.81	chr17	+	2836	19	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	309	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	99.6975828427719	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCTGGTGATTGT	1488	False	NA	14	True	AATAAA	-15	NA	35124524	35133022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.82	chr17	+	2746	19	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	6637	6	-302	1	3prime_fragment	FALSE	canonical	3	188	junction_1	62.0857879206537	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	1547	False	NA	13	True	AATAAA	-14	NA	35124583	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.84	chr17	+	3461	15	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	-147	1	intron_retention	FALSE	canonical	3	319	junction_4	42.3623822343766	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	1702	False	NA	13	True	AATAAA	-14	NA	35124738	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.85	chr17	+	2524	17	NIC	ENSMUSG00000013787.16	novel	3934	26	NA	NA	147	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	95.2501435366373	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	2088	False	NA	12	True	AATAAA	-13	NA	35125124	35133020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.86	chr17	+	3523	3	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	912	0	intron_retention	FALSE	canonical	3	435	junction_2	3	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	103	False	NA	19	True	AATAAA	-20	NA	35128532	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35129812_35129953_35131786_35132615
ES.15046.87	chr17	+	1004	5	ISM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	12252	6	248	1	3prime_fragment	FALSE	canonical	3	414	junction_3	11.4972822875669	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	1769	False	NA	13	True	AATAAA	-14	NA	35130198	35133021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15046.9	chr17	+	3853	28	NNC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	100.735865895125	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6675	False	NA	19	True	AATAAA	-20	NA	35117449	35133027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124609_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ES.15047.1	chr17	-	1645	1	Genic_Genomic	ENSMUSG00000024371.15	novel	NA	NA	NA	NA	560	7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTTGACATCATTGGC	8051	False	NA	NA	False	AATAAA	-19	NA	35113963	35112318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_35112300_35114000
ES.15048.1	chr17	-	301	1	Intergenic	novelGene_12549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATAAATAAATCTTTA	8311	False	NA	NA	False	NA	NA	NA	35123487	35123186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35123200_35123500
ES.15049.1	chr17	+	2218	18	NIC	ENSMUSG00000007034.16	novel	2261	21	NA	NA	-343	-10	intron_retention	TRUE	non_canonical	1	3	junction_1	7.25940506775289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTTGATAAGTTTATG	244	False	NA	NA	False	ATTAAA	-13	NA	35136351	35149322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ES.15049.2	chr17	+	2077	18	NNC	ENSMUSG00000007034.16	novel	2246	18	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.53997420901851	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	85	False	NA	NA	False	ATTAAA	-21	NA	35136659	35149330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35136731_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ES.15049.3	chr17	+	2180	18	FSM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	-16	82	-16	-2	multi-exon	FALSE	non_canonical	1	4	junction_1	7.17888098382546	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	104	False	NA	NA	False	ATTAAA	-21	NA	35136678	35149330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35136853_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ES.15049.4	chr17	+	2253	17	NNC	ENSMUSG00000007034.16	novel	3055	20	NA	NA	318	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	7.65669641555678	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTTTATGGCTTTATT	438	False	NA	NA	False	ATTAAA	-21	NA	35137012	35149330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35137048_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ES.15049.5	chr17	+	176	1	Intergenic	novelGene_12550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAAGCTTT	1662	False	NA	NA	False	NA	NA	NA	35143967	35144143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35144000_35144100
ES.15049.6	chr17	+	311	1	Intergenic	novelGene_12551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGGTTTTTCTTC	1664	False	NA	NA	False	NA	NA	NA	35143969	35144280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35144000_35144300
ES.15049.7	chr17	+	719	6	ISM	ENSMUSG00000007034.16	ENSMUST00000169230.2	2246	18	10438	81	10438	-1	3prime_fragment	FALSE	canonical	3	13	junction_2	7.93473376995095	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTATGGCTTTATTT	4827	False	NA	NA	False	ATTAAA	-22	NA	35147132	35149331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ES.1505.1	chr1	+	8481	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	59	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_8	11.4355000396583	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891231	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.11	chr1	+	7067	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	13	1126	-6	823	multi-exon	FALSE	canonical	3	22	junction_7	13.1823079402048	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTCCTTTGATTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	138891459	139102655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.12	chr1	+	5427	22	NNC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-4	-805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.4482859826875	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTTCTGAGCGATGA	NA	False	NA	NA	False	AATAAA	-11	NA	138891461	139101027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969671_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.13	chr1	+	7692	16	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.5250266751845	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891471	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.14	chr1	+	7105	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	7	814	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	11.4355000396583	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGAAATTCCTGTTCCT	NA	False	NA	NA	False	AATAAA	-6	NA	138891472	139102646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.15	chr1	+	7763	17	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	19.506008689632	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891472	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.16	chr1	+	7494	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	7	-686	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	11.4355000396583	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGCTAATGGAATGCGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	138891472	139103035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.17	chr1	+	6919	15	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	8	-692	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.2061637330205	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCAGCGCTAATGGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	138891473	139103029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138967737_138967788_138969661_138969782_139008910_139009012_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.18	chr1	+	10479	22	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	8	824	intron_retention	FALSE	canonical	0	0	junction_12	19.4673981784093	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCCTTTGATTAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	138891473	139102656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139021719_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.19	chr1	+	8012	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	17.713634668966	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891475	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.2	chr1	+	8396	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	-190	0	84	0	multi-exon	FALSE	canonical	3	22	junction_7	13.1823079402048	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891256	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.20	chr1	+	7977	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	18.8930507970802	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891483	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.21	chr1	+	7197	11	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	23.8035711606473	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTGTGTGGTGATGG	NA	False	NA	9	True	AATAAA	-15	NA	138891490	139103779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.22	chr1	+	7985	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	27	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	19.0687631620894	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATTGTGTGTGGTGA	NA	False	NA	6	True	AATAAA	-12	NA	138891492	139103776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.23	chr1	+	7690	16	NNC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.2531652193497	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891493	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071202_139071321_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.24	chr1	+	6674	5	ISM	ENSMUSG00000056268.16	ENSMUST00000200533.5	1853	10	328	15403	35	-8801	5prime_fragment	FALSE	canonical	3	61	junction_3	11.0113577727726	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCCAAACCCTATTTA	NA	False	NA	NA	False	NA	NA	NA	138891500	138976053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661
ES.1505.25	chr1	+	8104	21	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	36	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.6480915103732	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891501	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.26	chr1	+	8166	22	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.1596597608652	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891502	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.27	chr1	+	6841	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	41	814	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	19.0687631620894	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGAAATTCCTGTTCCT	NA	False	NA	NA	False	AATAAA	-6	NA	138891506	139102646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.28	chr1	+	7967	20	NNC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.9136337606206	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891587	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071202_139071321_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.29	chr1	+	7979	20	NIC	ENSMUSG00000056268.16	novel	8073	21	NA	NA	-14323	-3	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	10.5646669784547	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	37	False	NA	8	True	AATAAA	-14	NA	138967735	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.3	chr1	+	8377	24	NNC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-62	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	21.2770899270928	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAACATTGTGTGTGGT	NA	False	NA	4	True	AATAAA	-10	NA	138891384	139103774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_138891624_138893903_138893969_138911960_138912017_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.30	chr1	+	4725	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCGTACCCTGCAGTTG	NA	False	NA	NA	False	TTTAAA	-25	NA	139000586	139005311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_139000600_139005300
ES.1505.31	chr1	+	7329	12	ISM	ENSMUSG00000056268.16	ENSMUST00000094505.6	8073	21	118162	5	-42	-5	3prime_fragment	FALSE	canonical	3	55	junction_11	7.55585263824733	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATTGTGTGTGGTGA	NA	False	NA	6	True	AATAAA	-12	NA	139013619	139103776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.32	chr1	+	8428	11	NIC	ENSMUSG00000056268.16	novel	4406	6	NA	NA	6811	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	21.7027648008266	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	139020472	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139021719_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.33	chr1	+	5825	1	Genic_Genomic	ENSMUSG00000056268.16	novel	NA	NA	NA	NA	-2308	-11044	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAACTCTTTGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	139047184	139053009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_139047200_139053000
ES.1505.34	chr1	+	6868	7	ISM	ENSMUSG00000056268.16	ENSMUST00000199634.2	7297	10	17624	-60	17624	0	3prime_fragment	FALSE	canonical	3	55	junction_6	9.08753725347706	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	139067116	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.4	chr1	+	8173	20	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-62	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.1312865475841	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGTGGTGATGGC	NA	False	NA	10	True	AATAAA	-16	NA	138891384	139103780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.5	chr1	+	8155	21	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	17.482777239329	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891387	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.6	chr1	+	4277	3	ISM	ENSMUSG00000056268.16	ENSMUST00000200533.5	1853	10	223	36630	-51	-30028	5prime_fragment	FALSE	canonical	3	79	junction_2	5.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGCCTAGACTAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	138891395	138954826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_138891624_138893903_138893969_138950842
ES.1505.7	chr1	+	7959	19	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	20.5152758502019	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGTGTGTGGTGATG	NA	False	NA	8	True	AATAAA	-14	NA	138891441	139103778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.8	chr1	+	7680	15	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.8248710009443	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891442	139103781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_138891624_138893903_138893969_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.1505.9	chr1	+	7461	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	7	738	7	-678	multi-exon	FALSE	canonical	3	22	junction_7	13.1823079402048	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCGTTATAATCCAG	NA	False	NA	NA	False	AATAAA	-26	NA	138891453	139103043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ES.15050.10	chr17	+	3515	3	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	21	-605	intron_retention	FALSE	canonical	3	122	junction_1	3	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCGTTTGTGGAGTCT	8005	False	NA	8	True	NA	NA	NA	35150310	35154292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35150524_35150891_35153482_35153580
ES.15050.11	chr17	+	3791	3	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	21	-600	intron_retention	FALSE	canonical	3	117	junction_1	5.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	8005	False	NA	13	True	NA	NA	NA	35150310	35154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35153162_35153258_35153482_35153580
ES.15050.12	chr17	+	3063	4	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	21	-600	intron_retention	FALSE	canonical	3	122	junction_1	26.5120517668642	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	8005	False	NA	13	True	NA	NA	NA	35150310	35154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35150524_35150891_35151085_35151541_35153482_35153580
ES.15050.13	chr17	+	2443	6	NNC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1290114918218	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8005	False	NA	NA	False	NA	NA	NA	35150310	35154897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35150524_35150840_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ES.15050.14	chr17	+	2470	5	NIC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	35	-5	intron_retention	FALSE	canonical	3	102	junction_3	29.2008133448368	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	8019	False	NA	NA	False	NA	NA	NA	35150324	35154892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153482_35153580
ES.15050.16	chr17	+	3586	5	NNC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	52	0	intron_retention	FALSE	canonical	0	0	junction_1	66.0776058888335	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8036	False	NA	NA	False	NA	NA	NA	35150341	35154897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35150524_35150840_35151085_35151541_35153162_35153258_35153482_35153580
ES.15050.17	chr17	+	5365	4	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	53	1342	intron_retention	FALSE	canonical	3	117	junction_2	4.49691252107735	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCTGGCTTTGATTGCT	8037	False	NA	NA	False	NA	NA	NA	35150342	35156271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35150524_35150891_35153162_35153258_35153482_35153580
ES.15050.18	chr17	+	3631	4	NIC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	53	0	intron_retention	FALSE	canonical	3	122	junction_1	26.5120517668642	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8037	False	NA	NA	False	NA	NA	NA	35150342	35154897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35150524_35150891_35151085_35151541_35153482_35153580
ES.15050.19	chr17	+	3036	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	114	-676	53	644	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGAAGGTGACTCTT	8037	False	NA	NA	False	AATAGA	-15	NA	35150342	35155573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ES.15050.2	chr17	+	1890	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	0	584	0	-584	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTGTCTGCTCACGCC	7923	False	NA	29	True	AAAAAG	-16	NA	35150228	35154313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ES.15050.20	chr17	+	3033	4	ISM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	53	632	53	-600	intron_retention	FALSE	canonical	3	117	junction_3	29.0631496343164	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	8037	False	NA	13	True	NA	NA	NA	35150342	35154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258
ES.15050.3	chr17	+	3508	3	NIC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	0	-605	intron_retention	FALSE	canonical	3	128	junction_2	26.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCGTTTGTGGAGTCT	7923	False	NA	8	True	NA	NA	NA	35150228	35154292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35151085_35151541_35153482_35153580
ES.15050.4	chr17	+	3611	2	FSM	ENSMUSG00000007038.6	ENSMUST00000174715.2	446	2	-609	-2556	1	-600	multi-exon	FALSE	canonical	3	181	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7924	False	NA	13	True	NA	NA	NA	35150229	35154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35151085_35151541
ES.15050.5	chr17	+	3035	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	-48	632	13	-600	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	7936	False	NA	13	True	NA	NA	NA	35150241	35154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
ES.15050.6	chr17	+	3642	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	-24	1	-24	-1	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGATTCGGGCTGCGTT	7960	False	NA	NA	False	NA	NA	NA	35150265	35154928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
ES.15050.7	chr17	+	3794	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	62	-1382	1	1350	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGATTGCTGATTTTGC	7985	False	NA	NA	False	NA	NA	NA	35150290	35156279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ES.15050.8	chr17	+	2411	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	63	0	2	0	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7986	False	NA	NA	False	NA	NA	NA	35150291	35154897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ES.15050.9	chr17	+	2298	6	NNC	ENSMUSG00000007038.6	novel	2474	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	58.6890108964191	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8004	False	NA	NA	False	NA	NA	NA	35150309	35154897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35150524_35150891_35151085_35151541_35151710_35152978_35153162_35153258_35153482_35153580
ES.15051.1	chr17	+	178	1	Intergenic	novelGene_12552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35157914	35158092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35157900_35158100
ES.15052.1	chr17	+	218	1	Intergenic	novelGene_12553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	9062	False	NA	NA	False	AAGAAA	-22	NA	35168133	35168351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35168100_35168400
ES.15053.1	chr17	-	3089	1	FSM	ENSMUSG00000093009.3	ENSMUST00000175268.3	66	1	-1470	-1553	-1470	1553	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5991	False	NA	NA	False	NA	NA	NA	35171463	35168374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35168400_35171500
ES.15053.2	chr17	-	585	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	-1	-5	-1	0	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGACTTTTTCTGTGTC	6009	False	NA	NA	False	AATAAA	-19	NA	35171445	35169213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ES.15053.3	chr17	-	2079	3	NIC	ENSMUSG00000092203.8	novel	747	4	NA	NA	-277	0	intron_retention	FALSE	canonical	3	115	junction_2	37.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGACTTTTTCTGTGTC	5730	False	NA	NA	False	AATAAA	-19	NA	35171724	35169213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35169452_35169673_35170902_35171111
ES.15053.4	chr17	-	1821	3	NIC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	-5	intron_retention	FALSE	canonical	3	94	junction_2	48	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTTAAATAGACTT	6010	False	NA	NA	False	AATAAA	-9	NA	35171444	35169223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35169452_35169673_35171150_35171327
ES.15053.5	chr17	-	2053	2	ISM	ENSMUSG00000092203.8_ENSMUSG00000093009.3	ENSMUST00000174173.2	635	3	-42	-1198	-39	-5	intron_retention	FALSE	canonical	3	115	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTTAAATAGACTT	5968	False	NA	NA	False	AATAAA	-9	NA	35171486	35169223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_35170902_35171111
ES.15053.6	chr17	-	602	5	NNC	ENSMUSG00000092203.8	novel	579	5	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.5037036020988	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTTAAATAGACTT	6010	False	NA	NA	False	AATAAA	-9	NA	35171444	35169223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35169452_35169673_35169824_35170860_35170902_35171083_35171150_35171327
ES.15054.1	chr17	-	2805	1	FSM	ENSMUSG00000090877.4	ENSMUST00000172753.2	2803	1	3	-5	3	5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGTTTGTATGT	8774	False	NA	NA	False	AATAAA	-13	NA	35178211	35175406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35175400_35178200
ES.15055.1	chr17	-	2683	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	117	167	117	-167	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCCTGTTGTGTTTG	9914	False	NA	NA	False	AATAAA	-21	NA	35191015	35188332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35188300_35191000
ES.15055.2	chr17	-	2395	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	5	567	5	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCCCGCTGATGTG	9802	False	NA	NA	False	AATAAA	-24	NA	35191127	35188732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35188700_35191100
ES.15056.1	chr17	+	868	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	-30	2	-12	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	71	False	NA	24	True	AATAAA	-18	NA	35200825	35204865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ES.15056.10	chr17	+	3368	2	FSM	ENSMUSG00000007050.18	ENSMUST00000172523.2	1586	2	124	-1906	75	-2	multi-exon	FALSE	canonical	3	1192	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTCCTGGTTTGTCGTC	100	False	NA	22	True	AATAAA	-16	NA	35200961	35204863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201062_35201595
ES.15056.100	chr17	+	2808	23	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	556.361996803882	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9574	False	NA	10	True	AATAAA	-11	NA	35220062	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220213_35229585_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.101	chr17	+	4035	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	486.203198812058	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9574	False	NA	12	True	AATAAA	-13	NA	35220062	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224320_35224447_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.102	chr17	+	3967	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	469.756913381209	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9574	False	NA	11	True	AATAAA	-12	NA	35220062	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231727_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.103	chr17	+	4193	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	38	2	intron_retention	FALSE	canonical	0	0	junction_18	340.309969250781	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9576	False	NA	12	True	AATAAA	-13	NA	35220064	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.104	chr17	+	4300	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	38	1	intron_retention	FALSE	canonical	0	0	junction_16	343.18362647319	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9576	False	NA	11	True	AATAAA	-12	NA	35220064	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.107	chr17	+	4067	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	486.140966427436	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9577	False	NA	13	True	AATAAA	-14	NA	35220065	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231034_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.108	chr17	+	4121	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	4	intron_retention	FALSE	canonical	0	0	junction_11	423.410804283114	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9577	False	NA	14	True	AATAAA	-15	NA	35220065	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.109	chr17	+	4475	25	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	0	intron_retention	FALSE	canonical	3	1176	junction_5	203.184435748793	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9577	False	NA	10	True	AATAAA	-11	NA	35220065	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.11	chr17	+	888	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	-17	2	-9	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	226	False	NA	24	True	AATAAA	-18	NA	35201087	35204865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ES.15056.110	chr17	+	4458	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	4	intron_retention	FALSE	canonical	0	0	junction_12	436.283524338781	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9577	False	NA	14	True	AATAAA	-15	NA	35220065	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.111	chr17	+	3870	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	482.044432309482	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9577	False	NA	16	True	AATAAA	-17	NA	35220065	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234739_35234896_35235162
ES.15056.114	chr17	+	4472	27	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	39	1	intron_retention	FALSE	canonical	3	1176	junction_5	189.58121473988	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9577	False	NA	11	True	AATAAA	-12	NA	35220065	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.115	chr17	+	4387	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	39	0	intron_retention	FALSE	canonical	0	0	junction_18	423.817687335917	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9577	False	NA	10	True	AATAAA	-11	NA	35220065	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.116	chr17	+	4133	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	40	0	intron_retention	FALSE	canonical	0	0	junction_12	424.678047322382	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9578	False	NA	10	True	AATAAA	-11	NA	35220066	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231258_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.118	chr17	+	4166	28	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	41	2	intron_retention	FALSE	canonical	0	0	junction_2	494.213654002466	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9579	False	NA	12	True	AATAAA	-13	NA	35220067	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.12	chr17	+	1132	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	-49	-392	-1	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	234	False	NA	24	True	AATAAA	-18	NA	35201095	35204865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
ES.15056.120	chr17	+	3943	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	41	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	488.42844607862	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9579	False	NA	12	True	AATAAA	-13	NA	35220067	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.121	chr17	+	4765	24	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	41	4	intron_retention	FALSE	non_canonical	0	0	junction_6	537.538969440632	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9579	False	NA	14	True	AATAAA	-15	NA	35220067	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229470_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.122	chr17	+	6946	25	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	41	1	intron_retention	FALSE	canonical	0	0	junction_8	456.128423680096	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9579	False	NA	11	True	AATAAA	-12	NA	35220067	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.123	chr17	+	4082	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	541.59582755784	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9579	False	NA	12	True	AATAAA	-13	NA	35220067	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223860_35223952_35224096_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.124	chr17	+	4528	25	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	41	4	intron_retention	FALSE	canonical	0	0	junction_9	532.552186735931	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9579	False	NA	14	True	AATAAA	-15	NA	35220067	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35230180_35230301_35230382_35230492_35230575_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.126	chr17	+	4518	25	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	46	0	intron_retention	FALSE	canonical	0	0	junction_10	578.618972148819	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9584	False	NA	10	True	AATAAA	-11	NA	35220072	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35230180_35230492_35230575_35230671_35230783_35230875_35231064_35231195_35231272_35231377_35231465_35231625_35231705_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.127	chr17	+	4021	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	480.350949288912	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9584	False	NA	11	True	AATAAA	-12	NA	35220072	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233604_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.129	chr17	+	4322	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	47	6	intron_retention	FALSE	canonical	0	0	junction_17	343.191503805126	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9585	False	NA	16	True	AATAAA	-17	NA	35220073	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.13	chr17	+	3275	4	NIC	ENSMUSG00000007050.18	novel	528	5	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	278	junction_1	677.535894908077	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTGGTTTGTCGTCT	259	False	NA	23	True	AATAAA	-17	NA	35201120	35204864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35201344_35201595_35204116_35204224_35204285_35204392
ES.15056.133	chr17	+	6967	25	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_15	355.923912651598	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9586	False	NA	10	True	AATAAA	-11	NA	35220074	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.134	chr17	+	4168	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_9	511.979129162728	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9586	False	NA	10	True	AATAAA	-11	NA	35220074	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.135	chr17	+	4304	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_12	436.690574988771	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9586	False	NA	10	True	AATAAA	-11	NA	35220074	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.138	chr17	+	3999	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	481.06661121232	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9586	False	NA	14	True	AATAAA	-15	NA	35220074	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234101_35234351_35234453_35234569_35234896_35235162
ES.15056.139	chr17	+	4053	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	-4	intron_retention	FALSE	canonical	0	0	junction_4	489.888360616321	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAACATTCGCTCTTGTC	9586	False	NA	6	True	AATAAA	-7	NA	35220074	35235294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223552_35223747_35223870_35223968_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.14	chr17	+	173	1	Intergenic	novelGene_12556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAAAAAAAAAGGCCA	1328	False	NA	NA	False	NA	NA	NA	35211816	35211989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35211800_35212000
ES.15056.141	chr17	+	4503	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	4	intron_retention	FALSE	canonical	0	0	junction_11	436.627202095183	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9586	False	NA	14	True	AATAAA	-15	NA	35220074	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.142	chr17	+	4679	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_10	434.55328787158	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9587	False	NA	10	True	AATAAA	-11	NA	35220075	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.143	chr17	+	4043	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	49	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	485.628886066474	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9587	False	NA	14	True	AATAAA	-15	NA	35220075	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231258_35231377_35231465_35231625_35231705_35231797_35231905_35232013_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.144	chr17	+	4019	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	49	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	484.372789090117	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9587	False	NA	13	True	AATAAA	-14	NA	35220075	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231789_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.145	chr17	+	4055	31	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	49	67985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	478.032769681001	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGCTGGAAGCTGGGTG	9587	False	NA	NA	False	NA	NA	NA	35220075	35303283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162_35235299_35303252
ES.15056.147	chr17	+	4362	27	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	50	0	intron_retention	FALSE	canonical	0	0	junction_10	511.295831700976	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9588	False	NA	10	True	AATAAA	-11	NA	35220076	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232720_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.148	chr17	+	4019	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	486.199342078753	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9588	False	NA	12	True	AATAAA	-13	NA	35220076	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223418_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.15	chr17	+	157	1	Intergenic	novelGene_12562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATATATATAAAAAAA	4232	False	NA	NA	False	NA	NA	NA	35214720	35214877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35214700_35214900
ES.15056.150	chr17	+	4566	25	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	53	0	intron_retention	FALSE	canonical	3	44	junction_11	386.061271763376	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9591	False	NA	10	True	AATAAA	-11	NA	35220079	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.152	chr17	+	3550	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	67	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	494.530544237334	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9605	False	NA	11	True	AATAAA	-12	NA	35220093	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220213_35223222_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.155	chr17	+	3810	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	69	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	406.373637933961	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9607	False	NA	13	True	AATAAA	-14	NA	35220095	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.158	chr17	+	5384	20	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	0	intron_retention	FALSE	canonical	3	1232	junction_9	184.841865483599	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9608	False	NA	10	True	AATAAA	-11	NA	35220096	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.16	chr17	+	4570	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	-426	-7	-426	7	multi-exon	FALSE	canonical	0	0	junction_12	417.564149877336	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCTGTGTGGTGTG	9048	False	NA	17	True	AATAAA	-18	NA	35219536	35235305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.160	chr17	+	3788	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	554.40781442126	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9608	False	NA	14	True	AATAAA	-15	NA	35220096	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.161	chr17	+	4044	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	4	intron_retention	FALSE	canonical	3	44	junction_12	327.677814323765	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9608	False	NA	14	True	AATAAA	-15	NA	35220096	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.162	chr17	+	6383	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	6	intron_retention	FALSE	canonical	0	0	junction_11	424.913969383864	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9608	False	NA	16	True	AATAAA	-17	NA	35220096	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.163	chr17	+	4174	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	1	intron_retention	FALSE	canonical	3	1176	junction_5	198.008715220202	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9608	False	NA	11	True	AATAAA	-12	NA	35220096	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.164	chr17	+	4011	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	70	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	485.503043973456	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9608	False	NA	12	True	AATAAA	-13	NA	35220096	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232179_35232244_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.167	chr17	+	4009	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	481.06661121232	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9609	False	NA	10	True	AATAAA	-11	NA	35220097	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234127_35234340_35234453_35234569_35234896_35235162
ES.15056.168	chr17	+	4011	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	71	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	481.06661121232	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9609	False	NA	11	True	AATAAA	-12	NA	35220097	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234332_35234453_35234569_35234896_35235162
ES.15056.17	chr17	+	7164	24	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-107	0	intron_retention	FALSE	canonical	0	0	junction_9	361.977925989406	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9367	False	NA	10	True	AATAAA	-11	NA	35219855	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.171	chr17	+	4071	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	76	0	intron_retention	FALSE	canonical	0	0	junction_10	420.513316792703	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9614	False	NA	10	True	AATAAA	-11	NA	35220102	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.172	chr17	+	4204	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	79	7	intron_retention	FALSE	canonical	0	0	junction_12	337.206973845258	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCTGTGTGGTGTG	9617	False	NA	17	True	AATAAA	-18	NA	35220105	35235305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.175	chr17	+	4076	29	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	247	-7	-83	7	3prime_fragment	FALSE	canonical	0	0	junction_11	424.60875598987	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCTGTGTGGTGTG	9721	False	NA	17	True	AATAAA	-18	NA	35220209	35235305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.176	chr17	+	4279	28	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	308	-4	-22	4	intron_retention	FALSE	canonical	0	0	junction_11	423.570229559395	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9782	False	NA	14	True	AATAAA	-15	NA	35220270	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.178	chr17	+	4075	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-22	4	intron_retention	FALSE	canonical	0	0	junction_11	491.79985501593	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9782	False	NA	14	True	AATAAA	-15	NA	35220270	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235171
ES.15056.179	chr17	+	4395	27	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	309	-4	-21	4	intron_retention	FALSE	canonical	0	0	junction_11	427.453656784247	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9783	False	NA	14	True	AATAAA	-15	NA	35220271	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.18	chr17	+	4313	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-100	4	intron_retention	FALSE	canonical	0	0	junction_12	424.580325505225	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9374	False	NA	14	True	AATAAA	-15	NA	35219862	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.181	chr17	+	5736	19	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_7	478.06938129662	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9792	False	NA	10	True	AATAAA	-11	NA	35220280	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35230301_35230382_35230492_35230575_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35233754_35233912_35234120_35234340
ES.15056.182	chr17	+	4116	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-12	1	intron_retention	FALSE	canonical	0	0	junction_11	428.813205757587	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9792	False	NA	11	True	AATAAA	-12	NA	35220280	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.183	chr17	+	3977	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_11	505.909591520955	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9794	False	NA	10	True	AATAAA	-11	NA	35220282	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.185	chr17	+	4107	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	599.276378056	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	-2	True	NA	10	True	AATAAA	-11	NA	35220285	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35224225_35224327_35224450_35224579_35228771_35228971_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.186	chr17	+	3401	24	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-7	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	545.226901657572	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	-2	True	NA	14	True	AATAAA	-15	NA	35220285	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.19	chr17	+	4256	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-92	4	intron_retention	FALSE	canonical	0	0	junction_19	419.592700650018	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9382	False	NA	14	True	AATAAA	-15	NA	35219870	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.190	chr17	+	5386	20	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	5	4	intron_retention	FALSE	canonical	0	0	junction_8	381.819336257563	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	-9	True	NA	14	True	AATAAA	-15	NA	35220297	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.191	chr17	+	3971	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	483.841793748278	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	-8	True	NA	10	True	AATAAA	-11	NA	35220298	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235171
ES.15056.192	chr17	+	2304	15	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	589.501207351934	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	-2	True	NA	10	True	AATAAA	-11	NA	35220304	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223293_35231727_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.193	chr17	+	3947	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.840305065967	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	-2	True	NA	14	True	AATAAA	-15	NA	35220304	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223540_35223743_35223870_35223968_35224038_35224232_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.196	chr17	+	3921	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	419.5971266876	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	6	True	NA	14	True	AATAAA	-15	NA	35220312	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.197	chr17	+	5646	17	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	21	2	intron_retention	FALSE	canonical	0	0	junction_9	475.756071788632	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	7	True	NA	12	True	AATAAA	-13	NA	35220313	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35231377_35231465_35231625_35231705_35231797_35232097_35232367_35232618_35232873_35233001_35233081_35233209_35233754_35233912
ES.15056.199	chr17	+	3931	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	23	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	485.652569608508	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9	True	NA	14	True	AATAAA	-15	NA	35220315	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234860_35235162
ES.15056.2	chr17	+	3398	3	NIC	ENSMUSG00000007050.18	novel	840	5	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1192	junction_1	286	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGGTTTGTCGTCTGC	72	False	NA	25	True	AATAAA	-19	NA	35200826	35204866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35201062_35201595_35204285_35204392
ES.15056.20	chr17	+	4203	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	480.350949288912	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9391	False	NA	10	True	AATAAA	-11	NA	35219879	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233614_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.200	chr17	+	4156	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	23	4	intron_retention	FALSE	canonical	0	0	junction_11	436.523546000691	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9	True	NA	14	True	AATAAA	-15	NA	35220315	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.201	chr17	+	4054	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	494.574207458975	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	10	True	NA	12	True	AATAAA	-13	NA	35220316	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35230974_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.202	chr17	+	3949	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	494.530544237334	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	13	False	NA	10	True	AATAAA	-11	NA	35220319	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223190_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.204	chr17	+	4019	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_11	430.644949700251	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	34	False	NA	10	True	AATAAA	-11	NA	35220340	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.207	chr17	+	2937	21	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	67	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	498.674991853411	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	53	False	NA	13	True	AATAAA	-14	NA	35220359	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224507_35231487_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.209	chr17	+	3871	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	87	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	549.259691934219	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	73	False	NA	11	True	AATAAA	-12	NA	35220379	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223320_35223428_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231604_35231701_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.21	chr17	+	4773	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-80	0	intron_retention	FALSE	canonical	0	0	junction_11	402.154545417555	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9394	False	NA	10	True	AATAAA	-11	NA	35219882	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.211	chr17	+	3957	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	220	1	intron_retention	FALSE	canonical	0	0	junction_11	432.037343429905	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	206	False	NA	11	True	AATAAA	-12	NA	35220512	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.212	chr17	+	3635	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	223	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	503.495937542782	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	209	False	NA	10	True	AATAAA	-11	NA	35220515	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.213	chr17	+	4152	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	313	4	intron_retention	FALSE	canonical	0	0	junction_10	445.826344667966	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	299	False	NA	14	True	AATAAA	-15	NA	35220605	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.214	chr17	+	3741	27	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	358	4	intron_retention	FALSE	canonical	3	44	junction_11	338.821975912051	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	344	False	NA	14	True	AATAAA	-15	NA	35220650	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.216	chr17	+	6142	24	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	656	1	intron_retention	FALSE	canonical	0	0	junction_13	362.661736293815	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	642	False	NA	11	True	AATAAA	-12	NA	35220948	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.217	chr17	+	4754	25	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	696	2	intron_retention	FALSE	canonical	0	0	junction_8	452.98086596517	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	2079	False	NA	12	True	AATAAA	-13	NA	35222385	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35223316_35223412_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.218	chr17	+	198	1	Intergenic	novelGene_12572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1625	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAACTCATTACCACAG	2505	False	NA	NA	False	NA	NA	NA	35222811	35223009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35222800_35223000
ES.15056.219	chr17	+	3793	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-157	0	intron_retention	FALSE	canonical	0	0	junction_9	351.33296799475	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	2806	False	NA	10	True	AATAAA	-11	NA	35223112	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.22	chr17	+	4214	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-78	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	486.134695054805	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTGTCTGTGTGGTG	9396	False	NA	15	True	AATAAA	-16	NA	35219884	35235303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220393_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.221	chr17	+	3520	22	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	98	0	intron_retention	FALSE	canonical	3	1176	junction_1	210.017340823828	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	3479	False	NA	10	True	AATAAA	-11	NA	35223785	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.222	chr17	+	3305	25	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	98	4	intron_retention	FALSE	canonical	0	0	junction_1	532.707626123895	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	3479	False	NA	14	True	AATAAA	-15	NA	35223785	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35224096_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.223	chr17	+	4598	15	NIC	ENSMUSG00000007029.17	novel	3731	28	NA	NA	110	4	intron_retention	FALSE	canonical	0	0	junction_4	430.937972003264	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	3491	False	NA	14	True	AATAAA	-15	NA	35223797	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35224327_35224450_35224579_35229481_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35232367_35232618_35232724_35232803_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.224	chr17	+	3813	21	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	123	2	intron_retention	FALSE	canonical	0	0	junction_7	443.413607707296	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	3504	False	NA	12	True	AATAAA	-13	NA	35223810	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.225	chr17	+	3403	23	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	307	0	intron_retention	FALSE	canonical	0	0	junction_12	367.905207540661	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	3688	False	NA	10	True	AATAAA	-11	NA	35223994	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.226	chr17	+	3357	21	NNC	ENSMUSG00000007029.17	novel	3731	28	NA	NA	606	0	intron_retention	FALSE	canonical	0	0	junction_6	549.726702553187	1842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	3987	False	NA	10	True	AATAAA	-11	NA	35224293	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231727_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.227	chr17	+	3814	21	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-1475	1	intron_retention	FALSE	canonical	0	0	junction_3	498.687705382838	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	8409	False	NA	11	True	AATAAA	-12	NA	35228715	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.228	chr17	+	2654	22	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-610	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	569.110074277368	1842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9274	False	NA	10	True	AATAAA	-11	NA	35229580	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230792_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.229	chr17	+	4020	11	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	-229	4	intron_retention	FALSE	canonical	3	1400	junction_6	147.368280169106	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9655	False	NA	14	True	AATAAA	-15	NA	35229961	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233754_35233912_35234120_35234340
ES.15056.23	chr17	+	4304	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-77	4	intron_retention	FALSE	canonical	0	0	junction_12	334.285370878944	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9397	False	NA	14	True	AATAAA	-15	NA	35219885	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.230	chr17	+	2442	7	NIC	ENSMUSG00000007029.17	novel	3731	28	NA	NA	-544	0	intron_retention	FALSE	canonical	3	316	junction_1	510.567793953185	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	NA	False	NA	10	True	AATAAA	-11	NA	35231714	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35231797_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233754_35233912_35234120_35234340
ES.15056.232	chr17	+	176	1	Intergenic	novelGene_12575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGGGGGGGTTT	2939	False	NA	NA	False	NA	NA	NA	35262291	35262467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35262300_35262500
ES.15056.233	chr17	+	1133	7	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	-388	-29	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	431.052748770057	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTAGTGTTGTTT	1288	False	NA	NA	False	AATAAA	-12	NA	35268553	35277696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35268620_35269311_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ES.15056.234	chr17	+	1200	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	237	29	237	-29	multi-exon	FALSE	canonical	3	1084	junction_1	70.1524055182714	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTAGTGTTGTTT	1913	False	NA	NA	False	AATAAA	-12	NA	35269178	35277696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ES.15056.235	chr17	+	2237	5	ISM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	250	1900	250	1108	5prime_fragment	FALSE	canonical	3	1084	junction_1	55.4662059275736	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAACGAGAAAAGAAGCAAA	1926	False	NA	NA	False	NA	NA	NA	35269191	35275825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202
ES.15056.236	chr17	+	988	5	NIC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	267	-29	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	490.225649573745	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTAGTGTTGTTT	1943	False	NA	NA	False	AATAAA	-12	NA	35269208	35277696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35277305
ES.15056.237	chr17	+	3656	11	Fusion	ENSMUSG00000007041.10_ENSMUSG00000007039.13	novel	1342	7	NA	NA	269	2	intron_retention	FALSE	canonical	3	436	junction_7	341.810020332933	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	1945	False	NA	15	True	AATAAA	-21	NA	35269210	35281069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ES.15056.239	chr17	+	2009	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	442	34727	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	450.340937512903	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTAAACAAATAACTGAAG	2118	False	NA	NA	False	AAAACA	-14	NA	35269383	35312452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35275745_35312407
ES.15056.24	chr17	+	4396	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-76	3	intron_retention	FALSE	canonical	0	0	junction_10	505.697456153146	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9398	False	NA	13	True	AATAAA	-14	NA	35219886	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.240	chr17	+	1200	5	ISM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	468	2719	468	289	5prime_fragment	FALSE	canonical	3	1084	junction_1	55.4662059275736	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTTTTATCTGTG	2144	False	NA	NA	False	ATTAAA	-23	NA	35269409	35275006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202
ES.15056.242	chr17	+	4074	4	ISM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	478	1922	478	1086	intron_retention	FALSE	canonical	3	1084	junction_1	60.3894766402963	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	2154	False	NA	NA	False	NA	NA	NA	35269419	35275803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008
ES.15056.243	chr17	+	1004	6	NNC	ENSMUSG00000007041.10	novel	843	4	NA	NA	-191	-29	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	466.635446574732	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTAGTGTTGTTT	3969	False	NA	NA	False	AATAAA	-12	NA	35271234	35277696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35271323_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ES.15056.244	chr17	+	1340	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	8	-6	8	2	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTTTCTCGAT	NA	False	NA	19	True	AATAAA	-25	NA	35278018	35281073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ES.15056.245	chr17	+	1412	6	NIC	ENSMUSG00000007039.13	novel	1342	7	NA	NA	29	1	intron_retention	FALSE	canonical	3	393	junction_1	34.9937137211814	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCTGTGACTGGTTTC	NA	False	NA	14	True	AATAAA	-20	NA	35278039	35281068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35280101_35280451_35280602_35280766
ES.15056.246	chr17	+	1293	7	NNC	ENSMUSG00000007039.13	novel	1342	7	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	173.473741208544	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	15	True	AATAAA	-21	NA	35278055	35281069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280772
ES.15056.247	chr17	+	1246	7	NNC	ENSMUSG00000007039.13	novel	1342	7	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	162.253659434849	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCTGTGACTGGTTTC	NA	False	NA	14	True	AATAAA	-20	NA	35278058	35281068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280500_35280602_35280766
ES.15056.248	chr17	+	1262	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	-14	6	-14	-2	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGGGCTGTGACTGGT	NA	False	NA	11	True	AATAAA	-17	NA	35278062	35281065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ES.15056.249	chr17	+	1509	5	NIC	ENSMUSG00000007039.13	novel	1342	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	393	junction_1	38.5640700652823	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGGGCTGTGACTGGT	NA	False	NA	11	True	AATAAA	-17	NA	35278069	35281065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35278249_35279078_35279438_35279578_35280101_35280451_35280602_35280766
ES.15056.250	chr17	+	1721	5	NIC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	-256	-30	intron_retention	FALSE	canonical	3	26	junction_4	198.493072926992	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAATAAAATAAAATT	NA	False	NA	-17	True	AATAGA	-26	NA	35278535	35281037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35279438_35279578_35279883_35279980_35280101_35280451_35280576_35280766
ES.15056.251	chr17	+	1194	7	NNC	ENSMUSG00000007039.13	novel	382	2	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	166.174021903412	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGGCTGTGACTGGTTT	NA	False	NA	13	True	AATAAA	-19	NA	35278551	35281067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35278642_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ES.15056.252	chr17	+	1257	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGTGACTGGTTTCT	NA	False	NA	15	True	AATAAA	-21	NA	35278789	35281069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ES.15056.253	chr17	+	1204	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	20	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	203.315368058809	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATAAGGGCTGTGACTGG	NA	False	NA	10	True	AATAAA	-16	NA	35278811	35281064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ES.15056.254	chr17	+	3282	2	FSM	ENSMUSG00000092586.9	ENSMUST00000174876.2	723	2	-2046	-513	-44	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGTTGTGTTTATTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	35284319	35289023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35286421_35287842
ES.15056.255	chr17	+	1054	4	FSM	ENSMUSG00000092586.9	ENSMUST00000173207.8	598	4	-37	-419	-37	-6	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGCGTTGTGTTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	35284326	35289020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35284427_35286302_35286421_35287842_35287954_35288295
ES.15056.256	chr17	+	1040	4	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-2709	-41	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	205.819230286083	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35293168	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35293306_35296110_35296183_35296812_35296939_35297034
ES.15056.257	chr17	+	966	4	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-404	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.629826838084	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35295473	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295499_35296072_35296183_35296812_35296939_35297034
ES.15056.258	chr17	+	1020	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172494.8	464	4	-61	-495	-61	-15	multi-exon	FALSE	canonical	0	0	junction_1	226.144987907217	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTGTAAAAGTAGTTA	NA	False	NA	5	True	NA	NA	NA	35295816	35297765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35295936_35296110_35296183_35296812_35296911_35297034
ES.15056.259	chr17	+	1025	4	NNC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-59	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	201.092571275575	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35295818	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295967_35296110_35296183_35296812_35296911_35297032
ES.15056.260	chr17	+	1220	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	-93	15	-58	-15	multi-exon	FALSE	canonical	3	419	junction_2	34.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTGTAAAAGTAGTTA	NA	False	NA	5	True	NA	NA	NA	35295819	35297765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35296183_35296812_35296939_35297034
ES.15056.261	chr17	+	1193	3	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-49	-15	intron_retention	FALSE	canonical	3	19	junction_1	200	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTGTAAAAGTAGTTA	NA	False	NA	5	True	NA	NA	NA	35295828	35297765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35296183_35296830_35296939_35297034
ES.15056.262	chr17	+	1036	4	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-38	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.629826838084	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35295839	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295935_35296072_35296183_35296812_35296939_35297034
ES.15056.263	chr17	+	1041	4	NIC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-37	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGAGCTGTCTGTGAG	NA	False	NA	22	True	NA	NA	NA	35295840	35297782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
ES.15056.264	chr17	+	1050	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-61	-239	-32	-15	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTGTAAAAGTAGTTA	NA	False	NA	5	True	NA	NA	NA	35295845	35297765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
ES.15056.265	chr17	+	1025	4	NNC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-25	-15	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	164.038613340477	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTGTAAAAGTAGTTA	NA	False	NA	5	True	NA	NA	NA	35295852	35297765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295967_35296110_35296183_35296830_35296939_35297034
ES.15056.267	chr17	+	996	4	NNC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.195928183455	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGAGCTGTCTGTGAG	NA	False	NA	22	True	NA	NA	NA	35295867	35297782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295936_35296110_35296183_35296830_35296939_35297034
ES.15056.268	chr17	+	987	4	NNC	ENSMUSG00000013766.12	novel	750	4	NA	NA	-10	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.629826838084	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35295867	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35295952_35296110_35296183_35296812_35296939_35297034
ES.15056.269	chr17	+	895	3	NNC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	-3	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-21	True	NA	NA	NA	35296127	35297739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35296183_35296803_35296939_35297034
ES.15056.270	chr17	+	920	3	NNC	ENSMUSG00000013766.12	novel	464	4	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	201	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35296254	35297780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35296303_35296812_35296939_35297034
ES.15056.271	chr17	+	1505	1	NIC	ENSMUSG00000013766.12	novel	1142	3	NA	NA	137	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGTAGTTAAGAGAGC	NA	False	NA	12	True	NA	NA	NA	35296267	35297772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35296300_35297800
ES.15056.272	chr17	+	162	1	Intergenic	novelGene_12577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	35307273	35307435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35307300_35307400
ES.15056.273	chr17	+	2026	20	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.2360073576969	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308214	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308464_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.274	chr17	+	1988	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	-44	1	-16	-1	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTGCTTATGAGATG	NA	False	NA	31	True	AATAAA	-18	NA	35308222	35321962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.275	chr17	+	2176	21	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	48.0332176727731	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308222	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.276	chr17	+	3730	17	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_6	68.366201444866	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308222	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319888_35320217_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.277	chr17	+	4621	16	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-12	0	intron_retention	FALSE	canonical	3	113	junction_4	18.7455476195164	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308226	35321963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.278	chr17	+	3316	19	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	106	junction_5	21.8206069780125	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308227	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.279	chr17	+	4788	16	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-9	-4	intron_retention	FALSE	canonical	2	4	junction_3	52.6427793930205	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGGCTGCTTATGAG	NA	False	NA	28	True	AATAAA	-15	NA	35308229	35321959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320861_35320945_35321009_35321121_35321498_35321645
ES.15056.28	chr17	+	4877	26	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-66	2	intron_retention	FALSE	canonical	0	0	junction_15	349.594402701187	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9408	False	NA	12	True	AATAAA	-13	NA	35219896	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.281	chr17	+	4071	16	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	6	junction_10	42.9462713424835	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308229	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35320062_35320217_35320582_35320754_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.282	chr17	+	2312	20	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_4	48.662498714754	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308239	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310797_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.283	chr17	+	5505	17	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	7	-2	intron_retention	FALSE	canonical	3	113	junction_4	18.8031538245583	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308245	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35315354_35315457_35315581_35317669_35317785_35317874_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.284	chr17	+	3495	18	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	7	0	intron_retention	FALSE	canonical	3	106	junction_5	22.2114718325657	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308245	35321963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319665_35319937_35320062_35320217_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.285	chr17	+	4272	19	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	13	0	intron_retention	FALSE	canonical	2	4	junction_4	48.9886608195089	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308251	35321963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.286	chr17	+	4240	17	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-11	2	intron_retention	FALSE	canonical	3	113	junction_4	20.0775838934868	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTTATGAGATGTTC	NA	False	NA	34	True	AATAAA	-21	NA	35308255	35321965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321373_35321450_35321498_35321645
ES.15056.287	chr17	+	1808	19	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	40.406575678034	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGGCTGCTTATGAG	NA	False	NA	28	True	AATAAA	-15	NA	35308264	35321959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319654_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.288	chr17	+	3464	20	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	2	-2	intron_retention	FALSE	canonical	2	4	junction_4	49.1723184068732	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308268	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.289	chr17	+	3987	19	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	40.348482003664	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308268	35321963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319860_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.29	chr17	+	4221	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-66	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	475.520557113793	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9408	False	NA	13	True	AATAAA	-14	NA	35219896	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233194_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.290	chr17	+	3514	18	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	3	-2	intron_retention	FALSE	canonical	3	106	junction_5	21.8429436397939	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308269	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.291	chr17	+	2327	18	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	106	junction_5	21.6707031995418	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308278	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319665_35319937_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.292	chr17	+	4291	17	NIC	ENSMUSG00000007036.16	novel	536	7	NA	NA	224	-2	intron_retention	FALSE	canonical	0	0	junction_1	42.3820053206547	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308513	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35309265_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35319375_35319614_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.293	chr17	+	1964	20	NNC	ENSMUSG00000007036.16	novel	536	7	NA	NA	229	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.2360073576969	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35308518	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35308706_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.294	chr17	+	5679	14	NIC	ENSMUSG00000007036.16	novel	1824	19	NA	NA	2306	-6	intron_retention	FALSE	canonical	3	125	junction_1	19.3702633072376	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAATCTGGCTGCTTATG	NA	False	NA	26	True	AATAAA	-13	NA	35311151	35321957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321373_35321450_35321498_35321645
ES.15056.295	chr17	+	3326	11	NIC	ENSMUSG00000007036.16	novel	1824	19	NA	NA	57	-2	intron_retention	FALSE	canonical	3	151	junction_1	9.44457516249408	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGCTGCTTATGAGAT	NA	False	NA	30	True	AATAAA	-17	NA	35315384	35321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35315581_35317669_35317785_35317874_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.296	chr17	+	6572	1	NIC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	64	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35315391	35321963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35315400_35322000
ES.15056.297	chr17	+	1621	8	NNC	ENSMUSG00000007036.16	novel	1824	19	NA	NA	-358	-4	intron_retention	FALSE	canonical	2	6	junction_2	56.8854918557752	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGGCTGCTTATGAG	NA	False	NA	28	True	AATAAA	-15	NA	35319471	35321959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35320323_35320517_35320582_35320754_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ES.15056.3	chr17	+	4085	33	Fusion	ENSMUSG00000007050.18_ENSMUSG00000007029.17	novel	746	5	NA	NA	-6	7	multi-exon	TRUE	canonical	0	0	junction_5	473.86230529026	2093	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCTGTGTGGTGTG	77	False	NA	17	True	AATAAA	-18	NA	35200831	35235305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392_35204610_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.31	chr17	+	4424	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-60	5	intron_retention	FALSE	canonical	0	0	junction_17	425.929159408016	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTGTCTGTGTGGTG	9414	False	NA	15	True	AATAAA	-16	NA	35219902	35235303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.32	chr17	+	4320	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-60	6	intron_retention	FALSE	canonical	0	0	junction_12	421.360337999171	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9414	False	NA	16	True	AATAAA	-17	NA	35219902	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.33	chr17	+	4178	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-60	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	473.914038674018	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9414	False	NA	13	True	AATAAA	-14	NA	35219902	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231727_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.36	chr17	+	4184	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-54	4	intron_retention	FALSE	canonical	0	0	junction_11	499.320635858053	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9420	False	NA	14	True	AATAAA	-15	NA	35219908	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.37	chr17	+	4170	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-50	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	484.372789090117	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9424	False	NA	11	True	AATAAA	-12	NA	35219912	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231923_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.39	chr17	+	4274	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-48	5	intron_retention	FALSE	canonical	0	0	junction_18	334.285370878944	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTGTCTGTGTGGTG	9426	False	NA	15	True	AATAAA	-16	NA	35219914	35235303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.4	chr17	+	3279	4	NIC	ENSMUSG00000007050.18	novel	840	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1192	junction_1	248.943099254964	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	83	False	NA	26	True	AATAAA	-20	NA	35200837	35204867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35201062_35201595_35204116_35204224_35204285_35204392
ES.15056.41	chr17	+	4724	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-48	1	intron_retention	FALSE	canonical	0	0	junction_10	344.823419779461	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9426	False	NA	11	True	AATAAA	-12	NA	35219914	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.42	chr17	+	4032	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-44	-1	intron_retention	FALSE	canonical	0	0	junction_6	498.506158010871	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATTCGCTCTTGTCTGT	9430	False	NA	9	True	AATAAA	-10	NA	35219918	35235297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224520_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.43	chr17	+	4443	29	FSM	ENSMUSG00000007029.17	ENSMUST00000173584.8	4048	29	-99	-296	-35	4	multi-exon	FALSE	canonical	0	0	junction_12	416.176527192145	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9439	False	NA	14	True	AATAAA	-15	NA	35219927	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.44	chr17	+	4446	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-35	3	intron_retention	FALSE	canonical	0	0	junction_10	431.054991892758	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9439	False	NA	13	True	AATAAA	-14	NA	35219927	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.45	chr17	+	8632	14	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-29	0	intron_retention	FALSE	canonical	0	0	junction_8	455.86661082372	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9445	False	NA	10	True	AATAAA	-11	NA	35219933	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35231190_35231272_35232012_35232097_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.47	chr17	+	6801	27	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-18	1	intron_retention	FALSE	non_canonical	0	0	junction_11	495.882443658771	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9456	False	NA	11	True	AATAAA	-12	NA	35219944	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231372_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35234120_35234340_35234896_35235162
ES.15056.49	chr17	+	4238	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-10	2	intron_retention	FALSE	canonical	0	0	junction_12	424.254981751324	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9464	False	NA	12	True	AATAAA	-13	NA	35219952	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.5	chr17	+	3914	2	NIC	ENSMUSG00000007050.18	novel	873	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	1764	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	91	False	NA	26	True	AATAAA	-20	NA	35200845	35204867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35204285_35204392
ES.15056.50	chr17	+	4392	27	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-24	-1	intron_retention	FALSE	canonical	0	0	junction_17	505.347049593192	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATTCGCTCTTGTCTGT	9514	False	NA	9	True	AATAAA	-10	NA	35220002	35235297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232369_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.51	chr17	+	4043	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-15	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	412.655562855139	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9523	False	NA	14	True	AATAAA	-15	NA	35220011	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.53	chr17	+	4363	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-14	2	intron_retention	FALSE	canonical	0	0	junction_11	340.412643971376	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9524	False	NA	12	True	AATAAA	-13	NA	35220012	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.54	chr17	+	4479	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-14	4	intron_retention	FALSE	canonical	0	0	junction_10	435.634932459161	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9524	False	NA	14	True	AATAAA	-15	NA	35220012	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.55	chr17	+	4457	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_11	339.593576179184	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9525	False	NA	10	True	AATAAA	-11	NA	35220013	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.57	chr17	+	4058	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-13	6	intron_retention	FALSE	canonical	0	0	junction_12	396.92403726409	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9525	False	NA	16	True	AATAAA	-17	NA	35220013	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.59	chr17	+	4297	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-9	4	intron_retention	FALSE	canonical	0	0	junction_19	414.489880418555	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9529	False	NA	14	True	AATAAA	-15	NA	35220017	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.6	chr17	+	3802	3	FSM	ENSMUSG00000007050.18	ENSMUST00000172666.2	1066	3	-2737	1	9	0	multi-exon	FALSE	canonical	3	1661	junction_1	51.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	92	False	NA	24	True	AATAAA	-18	NA	35200846	35204865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35204116_35204224_35204285_35204392
ES.15056.61	chr17	+	4030	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-9	4	intron_retention	FALSE	canonical	0	0	junction_11	502.829573759255	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9529	False	NA	14	True	AATAAA	-15	NA	35220017	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.63	chr17	+	3663	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	494.530544237334	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9529	False	NA	10	True	AATAAA	-11	NA	35220017	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.65	chr17	+	5471	19	NIC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	-9	4	intron_retention	FALSE	canonical	3	1232	junction_8	181.590274458127	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9529	False	NA	14	True	AATAAA	-15	NA	35220017	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230671_35230783_35230875_35231064_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.67	chr17	+	7485	22	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-7	3	intron_retention	FALSE	canonical	3	44	junction_8	363.921411366237	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCTCTTGTCTGTGTGG	9531	False	NA	13	True	AATAAA	-14	NA	35220019	35235301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35224038_35224225_35224327_35224450_35224579_35229481_35230301_35230382_35230443_35230575_35230875_35231064_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.68	chr17	+	4014	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	477.232586624204	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9531	False	NA	10	True	AATAAA	-11	NA	35220019	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234926_35235258
ES.15056.69	chr17	+	4056	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	485.503043973456	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9532	False	NA	11	True	AATAAA	-12	NA	35220020	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232179_35232274_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.7	chr17	+	823	5	NIC	ENSMUSG00000007050.18	novel	840	5	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	709.578175749508	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTCCTGGTTTGTCGTC	93	False	NA	22	True	AATAAA	-16	NA	35200847	35204863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35201062_35201616_35201664_35204084_35204116_35204224_35204285_35204392
ES.15056.70	chr17	+	4242	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	-6	5	intron_retention	FALSE	canonical	0	0	junction_12	340.309969250781	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTGTCTGTGTGGTG	9532	False	NA	15	True	AATAAA	-16	NA	35220020	35235303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.71	chr17	+	6604	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	346.777352986579	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9539	False	NA	10	True	AATAAA	-11	NA	35220027	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.72	chr17	+	4063	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	486.158019064372	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATTCGCTCTTGTCTGT	9539	False	NA	9	True	AATAAA	-10	NA	35220027	35235297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230303_35230388_35230492_35230579_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.76	chr17	+	3933	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	494.58542730044	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9543	False	NA	10	True	AATAAA	-11	NA	35220031	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.77	chr17	+	4795	24	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	5	1	intron_retention	FALSE	canonical	3	1176	junction_5	204.23962908054	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9543	False	NA	11	True	AATAAA	-12	NA	35220031	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.78	chr17	+	4260	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	5	4	intron_retention	FALSE	canonical	0	0	junction_11	424.799610620906	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9543	False	NA	14	True	AATAAA	-15	NA	35220031	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.79	chr17	+	4456	28	ISM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	69	-4	5	4	intron_retention	FALSE	canonical	0	0	junction_12	419.639570344156	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9543	False	NA	14	True	AATAAA	-15	NA	35220031	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340
ES.15056.8	chr17	+	733	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174241.8	521	4	6	-218	6	0	multi-exon	FALSE	canonical	3	88	junction_1	766.950237412224	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGGTTTGTCGTCTG	31	False	NA	24	True	AATAAA	-18	NA	35200892	35204865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201062_35204084_35204116_35204224_35204285_35204392
ES.15056.81	chr17	+	4354	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	5	4	intron_retention	FALSE	canonical	0	0	junction_17	342.104047029676	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9543	False	NA	14	True	AATAAA	-15	NA	35220031	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.82	chr17	+	4351	29	NNC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_12	473.880521571092	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCGCTCTTGTCTGTGT	9543	False	NA	11	True	AATAAA	-12	NA	35220031	35235299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233194_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.84	chr17	+	4101	29	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	494.455187451764	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9557	False	NA	10	True	AATAAA	-11	NA	35220045	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230926_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.85	chr17	+	4417	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	19	6	intron_retention	FALSE	canonical	0	0	junction_11	432.160578294803	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9557	False	NA	16	True	AATAAA	-17	NA	35220045	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.86	chr17	+	4216	27	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_10	402.911063938169	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9560	False	NA	10	True	AATAAA	-11	NA	35220048	35235298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.88	chr17	+	3370	25	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	23	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	532.786301490152	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9561	False	NA	14	True	AATAAA	-15	NA	35220049	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220713_35224458_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.9	chr17	+	528	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	44	268	13	31	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTAAGGTGTGTTTTG	38	False	NA	NA	False	NA	NA	NA	35200899	35204599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ES.15056.90	chr17	+	3513	22	NNC	ENSMUSG00000007029.17	novel	4048	29	NA	NA	25	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	478.483564547363	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACATTCGCTCTTGTCTG	9563	False	NA	8	True	AATAAA	-9	NA	35220051	35235296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224334_35231081_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ES.15056.91	chr17	+	3965	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	25	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	493.672674131021	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9563	False	NA	12	True	AATAAA	-13	NA	35220051	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.93	chr17	+	4453	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	26	4	intron_retention	FALSE	canonical	0	0	junction_11	428.920487545755	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCTCTTGTCTGTGTGGT	9564	False	NA	14	True	AATAAA	-15	NA	35220052	35235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
ES.15056.95	chr17	+	4338	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	27	6	intron_retention	FALSE	canonical	0	0	junction_10	491.660873230846	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTTGTCTGTGTGGTGT	9565	False	NA	16	True	AATAAA	-17	NA	35220053	35235304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233194_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15056.98	chr17	+	4144	28	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	35	2	intron_retention	FALSE	canonical	0	0	junction_18	425.426315674744	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	9573	False	NA	12	True	AATAAA	-13	NA	35220061	35235300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ES.15057.1	chr17	-	5206	1	Genic_Genomic	ENSMUSG00000073415.5	novel	NA	NA	NA	NA	-313	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCTCTTCAAGATGC	4419	False	NA	NA	False	AATAAA	-21	NA	35201077	35195871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_35195900_35201100
ES.15058.1	chr17	-	157	1	Intergenic	novelGene_12554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	35208630	35208473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35208500_35208600
ES.15059.1	chr17	-	171	1	Intergenic	novelGene_12555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	35209295	35209124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35209100_35209300
ES.1506.1	chr1	-	2283	1	Antisense	novelGene_ENSMUSG00000104436.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGCCCCCTCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	138899106	138896823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_138896800_138899100
ES.1506.2	chr1	-	2168	1	Antisense	novelGene_ENSMUSG00000104436.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAACCTCGTACATTT	NA	False	NA	NA	False	NA	NA	NA	138900491	138898323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_138898300_138900500
ES.15060.1	chr17	-	6006	3	Intergenic	novelGene_12557	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	153.5	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGTAACAATGATTTT	NA	False	NA	NA	False	NA	NA	NA	35219765	35212528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218446_35219142_35219186_35219719
ES.15060.10	chr17	-	3203	2	Intergenic	novelGene_12565	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	-17	True	NA	NA	NA	35219808	35215700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218446_35219350
ES.15060.11	chr17	-	2745	4	Intergenic	novelGene_12566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	144.019288831585	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	-17	True	NA	NA	NA	35219829	35215700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218164_35218316_35218446_35219142_35219186_35219719
ES.15060.13	chr17	-	3629	1	Intergenic	novelGene_12564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	274	False	NA	-17	True	NA	NA	NA	35219329	35215700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35215700_35219300
ES.15060.16	chr17	-	2177	2	Intergenic	novelGene_12567	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAAGGTTGTCTGTT	1405	False	NA	-26	True	NA	NA	NA	35218198	35215709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35215802_35216113
ES.15060.17	chr17	-	2971	4	Intergenic	novelGene_12569	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	14.142135623731	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAAGGTTGTCTGTT	NA	False	NA	-26	True	NA	NA	NA	35219796	35215709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35217030_35217082_35218446_35218974_35219186_35219719
ES.15060.2	chr17	-	2413	2	Intergenic	novelGene_12558	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGGAATTTTGACAAGC	3905	False	NA	NA	False	NA	NA	NA	35215698	35212620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35214203_35214867
ES.15060.20	chr17	-	3396	2	Intergenic	novelGene_12568	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAAGGTTGTCTGTT	274	False	NA	-26	True	NA	NA	NA	35219329	35215709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35217202_35217425
ES.15060.22	chr17	-	2681	5	Antisense	novelGene_ENSMUSG00000007029.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	132.934899480911	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAAGGTTGTCTGTT	NA	False	NA	-26	True	NA	NA	NA	35219976	35215709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35217833_35218004_35218063_35218245_35218446_35219142_35219186_35219719
ES.15060.24	chr17	-	2587	3	Intergenic	novelGene_12570	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	153.5	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCTGGGCAGGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	35219802	35215984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218446_35219142_35219186_35219719
ES.15060.25	chr17	-	2763	3	Intergenic	novelGene_12571	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	15	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGCTGGGCAGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	35219811	35215985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218446_35218974_35219186_35219719
ES.15060.27	chr17	-	2598	3	Antisense	novelGene_ENSMUSG00000007029.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	153.5	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAAGAGAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	35219998	35216169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35218446_35219142_35219186_35219719
ES.15060.3	chr17	-	6627	2	Intergenic	novelGene_12559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35219811	35212650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35219186_35219719
ES.15060.4	chr17	-	157	1	Intergenic	novelGene_12560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCTAG	6146	False	NA	NA	False	NA	NA	NA	35213457	35213300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35213300_35213500
ES.15060.5	chr17	-	177	1	Intergenic	novelGene_12561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAGAAAGAG	5277	False	NA	NA	False	NA	NA	NA	35214326	35214149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35214100_35214300
ES.15060.6	chr17	-	3102	3	Antisense	novelGene_ENSMUSG00000007029.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	153.5	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGGTTCTGCATTTG	NA	False	NA	30	True	NA	NA	NA	35219986	35215653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35218446_35219142_35219186_35219719
ES.15060.7	chr17	-	3102	3	Intergenic	novelGene_12563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	15	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTGTGGTTCTGCAT	NA	False	NA	27	True	NA	NA	NA	35219821	35215656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35218446_35218974_35219186_35219719
ES.15060.8	chr17	-	3972	2	Antisense	novelGene_ENSMUSG00000007029.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	NA	False	NA	-17	True	NA	NA	NA	35220206	35215700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35219186_35219719
ES.15061.1	chr17	-	7334	8	Antisense	novelGene_ENSMUSG00000007029.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTACTACTTCCCCC	8609	False	NA	NA	False	NA	NA	NA	35234096	35225133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35229647_35230180_35231375_35231463_35231622_35232094_35232166_35232237_35232365_35232616_35232722_35232801_35232871_35232999
ES.15061.2	chr17	-	263	1	Intergenic	novelGene_12573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	7142	False	NA	NA	False	NA	NA	NA	35229370	35229107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35229100_35229400
ES.15061.3	chr17	-	144	1	Intergenic	novelGene_12574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGTGGGAGGGGTT	7143	False	NA	NA	False	NA	NA	NA	35229369	35229225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35229200_35229400
ES.15062.10	chr17	-	3254	22	NIC	ENSMUSG00000007035.16	novel	2678	25	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_20	4.66618073271766	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGTGTTTCCTTAGGT	1793	False	NA	NA	False	AATAAA	-12	NA	35265698	35247585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35247829_35248171_35248246_35248628_35248767_35248853_35248998_35249176_35249252_35249584_35249735_35250123_35250251_35250329_35251398_35251735_35251846_35252198_35252272_35252565_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35265206_35265364_35265675
ES.15062.11	chr17	-	1687	1	Genic_Genomic	ENSMUSG00000007035.16	novel	NA	NA	NA	NA	-3805	1683	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGGTAACTTAGTG	8014	False	NA	NA	False	NA	NA	NA	35256072	35254385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_35254400_35256100
ES.15062.12	chr17	-	1290	11	NIC	ENSMUSG00000007035.16	novel	2678	25	NA	NA	5	154	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.26614580154031	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATGTTTGGTTTTGA	1775	False	NA	NA	False	NA	NA	NA	35265716	35257967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35258395_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206_35265364_35265675
ES.15062.13	chr17	-	6283	2	NNC	ENSMUSG00000007035.16	novel	855	2	NA	NA	473	-7	intron_retention	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAACTTAGACAGCTTA	2872	False	NA	NA	False	NA	NA	NA	35264619	35258128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35261796_35262003
ES.15062.2	chr17	-	497	4	NIC	ENSMUSG00000036185.10	novel	935	4	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.8200885394982	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	35246864	35244952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35245124_35245669_35245763_35246419_35246561_35246772
ES.15062.3	chr17	-	1069	3	NIC	ENSMUSG00000036185.10	novel	935	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_2	14	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	35246890	35244952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35245763_35246419_35246561_35246772
ES.15062.4	chr17	-	1281	2	NIC	ENSMUSG00000036185.10	novel	935	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-17	NA	35246890	35244952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35245763_35246419
ES.15062.5	chr17	-	4016	26	Fusion	ENSMUSG00000036185.10_ENSMUSG00000007035.16	novel	2678	25	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_14	15.520309275269	106	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	1763	False	NA	NA	False	AATAAA	-17	NA	35265728	35244952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772_35247829_35248171_35248246_35248628_35248767_35248853_35249252_35249584_35249731_35250123_35250251_35250329_35250520_35250654_35250743_35251316_35251398_35251735_35251846_35252568_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35265206_35265364_35265675
ES.15062.7	chr17	-	2684	25	NNC	ENSMUSG00000007035.16	novel	2678	25	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.58995733458747	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTCCTTAGGTCAC	1778	False	NA	NA	False	AATAAA	-15	NA	35265713	35247582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35247829_35248171_35248246_35248628_35248767_35248853_35248998_35249176_35249252_35249584_35249735_35250123_35250251_35250329_35250520_35250654_35250743_35251316_35251398_35251735_35251846_35252198_35252272_35252568_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206_35265364_35265675
ES.15063.1	chr17	-	1495	1	Genic_Genomic	ENSMUSG00000073414.9	novel	NA	NA	NA	NA	2489	506	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGAATCTGTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	35282657	35281162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_35281200_35282700
ES.15064.1	chr17	-	2109	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	16	-1435	7	1401	multi-exon	FALSE	canonical	2	8	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTTATTTCTCAAG	NA	False	NA	NA	False	AATAAA	-18	NA	35297025	35289017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35290736_35293150_35293289_35296772
ES.15064.2	chr17	-	813	3	FSM	ENSMUSG00000073413.10	ENSMUST00000172639.8	690	3	5	-128	-4	94	multi-exon	FALSE	canonical	2	8	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAAATGTTCGTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	35297036	35290324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35290736_35293150_35293289_35296772
ES.15064.3	chr17	-	3007	2	NNC	ENSMUSG00000073413.10	novel	667	2	NA	NA	862	92	intron_retention	FALSE	canonical	3	8	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGAAATGTTCGTTTGG	NA	False	NA	NA	False	NA	NA	NA	35296170	35290326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35293289_35296125
ES.15065.1	chr17	-	203	1	Intergenic	novelGene_12576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35305359	35305156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35305200_35305400
ES.15066.1	chr17	+	888	3	FSM	ENSMUSG00000034482.3	ENSMUST00000037849.3	509	3	-197	-182	-197	182	multi-exon	TRUE	canonical	2	3	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCGTCTCCTCTGATGG	6514	False	NA	NA	False	AATAAA	-16	NA	35327057	35331149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35327397_35329642_35329808_35330765
ES.15067.1	chr17	+	2079	1	Antisense	novelGene_ENSMUSG00000024387.14_AS_novelGene_ENSMUSG00000043807.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35334207	35336286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_35334200_35336300
ES.15067.2	chr17	+	159	1	Intergenic	novelGene_12578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35335790	35335949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35335800_35335900
ES.15068.1	chr17	+	1550	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	-31	-1	-3	1	multi-exon	FALSE	canonical	3	45	junction_1	21.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4558	False	NA	15	True	AATAAA	-15	NA	35340427	35343791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35340775_35342028_35342636_35343195
ES.15068.2	chr17	+	1102	3	NNC	ENSMUSG00000092417.4	novel	676	2	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTTTACTTTCTTGA	4567	False	NA	13	True	AATAAA	-13	NA	35340436	35343789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35340527_35342028_35342469_35343217
ES.15068.3	chr17	+	3323	1	Genic_Genomic	ENSMUSG00000092417.4	novel	NA	NA	NA	NA	10	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4599	False	NA	15	True	AATAAA	-15	NA	35340468	35343791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_35340500_35343800
ES.15068.4	chr17	+	2762	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	-1458	-9	11	1	multi-exon	FALSE	canonical	3	88	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4600	False	NA	15	True	AATAAA	-15	NA	35340469	35343791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35342636_35343195
ES.15068.5	chr17	+	1247	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	24	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTACTTTCTTGAAT	4613	False	NA	15	True	AATAAA	-15	NA	35340482	35343791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35340527_35342028_35342636_35343195
ES.15069.1	chr17	-	1111	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	-141	-9	2	7	multi-exon	TRUE	canonical	3	826	junction_1	47.9780042195264	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTACTGTGTGTTGCTGGG	NA	False	NA	0	True	AATAAA	-24	NA	35340403	35335164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ES.15069.10	chr17	-	1051	6	NIC	ENSMUSG00000024387.14	novel	961	7	NA	NA	19	-1	intron_retention	FALSE	canonical	3	826	junction_1	52.3854941753917	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTCTCCTACTGTG	NA	False	NA	-10	True	AATAAA	-14	NA	35340243	35335174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35335402_35336671_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ES.15069.2	chr17	-	905	7	NNC	ENSMUSG00000024387.14	novel	917	7	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	344.352895539832	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTCCTACTGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	35340210	35335171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340103
ES.15069.3	chr17	-	1001	7	NIC	ENSMUSG00000024387.14	novel	917	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	341.766326928535	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTCCTACTGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	35340972	35335171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340769
ES.15069.4	chr17	-	2823	4	NIC	ENSMUSG00000024387.14	novel	961	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	826	junction_1	46.1326589546085	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTCCTACTGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	35340245	35335171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35335402_35336671_35337048_35337434_35339504_35340097
ES.15069.5	chr17	-	894	7	FSM	ENSMUSG00000024387.14	ENSMUST00000173114.8	917	7	21	2	21	0	multi-exon	FALSE	canonical	3	9	junction_6	341.027369380621	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340384	35335173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340286
ES.15069.6	chr17	-	907	7	NNC	ENSMUSG00000024387.14	novel	961	7	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	334.965504028234	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340217	35335173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35335402_35336671_35336853_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ES.15069.9	chr17	-	2283	5	FSM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	-1652	1	2	-1	multi-exon	FALSE	canonical	3	826	junction_1	44.5028089001133	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTCTCCTACTGTG	NA	False	NA	-10	True	AATAAA	-14	NA	35340403	35335174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729
ES.1507.1	chr1	-	6435	1	FSM	ENSMUSG00000102626.2	ENSMUST00000194152.2	634	1	-3386	-2415	-3386	2415	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCGTGTGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	138915621	138909186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_138909200_138915600
ES.15070.1	chr17	-	782	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	230	1	230	-1	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTGGGTTTTGTCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	35350796	35347973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
ES.15071.1	chr17	+	308	1	Intergenic	novelGene_12579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5892	False	NA	NA	False	NA	NA	NA	35351557	35351865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35351600_35351900
ES.15072.1	chr17	+	4058	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-204	1	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	147.653539437202	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8284	False	NA	31	True	AATAAA	-32	NA	35353949	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.10	chr17	+	3971	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	174.503391371056	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8490	False	NA	29	True	AATAAA	-30	NA	35354155	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361460_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.102	chr17	+	3823	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8784	False	NA	31	True	AATAAA	-32	NA	35354449	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.103	chr17	+	4404	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	346	junction_1	123.011118805238	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8789	False	NA	30	True	AATAAA	-31	NA	35354454	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.104	chr17	+	3562	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_23	189.724853007642	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8789	False	NA	30	True	AATAAA	-31	NA	35354454	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.107	chr17	+	3585	24	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	194.469624318578	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8792	False	NA	16	True	AATAAA	-17	NA	35354457	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365183_35366116
ES.15072.108	chr17	+	3489	23	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	268.475036160389	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8793	False	NA	17	True	AATAAA	-18	NA	35354458	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357461_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.11	chr17	+	3859	27	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	214.850095670138	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCGAGTACCTTTTC	8509	False	NA	28	True	AATAAA	-29	NA	35354174	35366294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360888_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365876_35366116
ES.15072.110	chr17	+	3659	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	162.957624859962	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8793	False	NA	23	True	AATAAA	-24	NA	35354458	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.111	chr17	+	3700	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.260149183536	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8793	False	NA	29	True	AATAAA	-30	NA	35354458	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354493_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.114	chr17	+	3609	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	207.708507761712	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8795	False	NA	29	True	AATAAA	-30	NA	35354460	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.115	chr17	+	4150	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	276	junction_12	141.240453781836	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8796	False	NA	17	True	AATAAA	-18	NA	35354461	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732
ES.15072.116	chr17	+	3789	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_23	185.478555094652	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8796	False	NA	30	True	AATAAA	-31	NA	35354461	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
ES.15072.117	chr17	+	3910	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	346	junction_1	120.531281958484	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8796	False	NA	17	True	AATAAA	-18	NA	35354461	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.118	chr17	+	1929	14	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	222.369222254154	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8798	False	NA	23	True	AATAAA	-24	NA	35354463	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360948_35365077_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.119	chr17	+	3627	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	201.215680303499	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8798	False	NA	17	True	AATAAA	-18	NA	35354463	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35366116
ES.15072.12	chr17	+	3790	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	156.645809781884	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8513	False	NA	31	True	AATAAA	-32	NA	35354178	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.120	chr17	+	3716	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	238.630003142941	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8798	False	NA	15	True	AATAAA	-16	NA	35354463	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361941_35362029_35362107_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.121	chr17	+	3651	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	215.349522095283	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8799	False	NA	17	True	AATAAA	-18	NA	35354464	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363164_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.122	chr17	+	3601	24	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	242.90567766515	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8799	False	NA	31	True	AATAAA	-32	NA	35354464	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362663_35363175_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.123	chr17	+	3763	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	174.786068094685	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8800	False	NA	23	True	AATAAA	-24	NA	35354465	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361937_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.125	chr17	+	3618	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	227.001636680345	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8800	False	NA	29	True	AATAAA	-30	NA	35354465	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362663_35363175_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365335_35366116
ES.15072.127	chr17	+	4221	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	-6	intron_retention	FALSE	canonical	3	51	junction_4	192.927109461624	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8801	False	NA	23	True	AATAAA	-24	NA	35354466	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.128	chr17	+	3705	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	180.01046191819	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8801	False	NA	17	True	AATAAA	-18	NA	35354466	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361560_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.130	chr17	+	4107	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	4	intron_retention	FALSE	canonical	3	346	junction_1	124.770115000437	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTCCTTTGCCTAGT	8801	False	NA	10	True	AATAAA	-11	NA	35354466	35366276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.132	chr17	+	3720	27	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	188.814821934743	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8801	False	NA	17	True	AATAAA	-18	NA	35354466	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360888_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.133	chr17	+	3776	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	180.069115619531	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8802	False	NA	17	True	AATAAA	-18	NA	35354467	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363961_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.134	chr17	+	4507	23	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	276	junction_11	139.559756448035	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8803	False	NA	29	True	AATAAA	-30	NA	35354468	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361898_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.136	chr17	+	3751	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	222.426976781145	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8804	False	NA	15	True	AATAAA	-16	NA	35354469	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363961_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
ES.15072.137	chr17	+	3705	27	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	174.732119570122	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8804	False	NA	29	True	AATAAA	-30	NA	35354469	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360867_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.138	chr17	+	3422	24	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	198.701160612447	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	8805	False	NA	22	True	AATAAA	-23	NA	35354470	35366288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359413_35360798_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.139	chr17	+	3661	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	194.850650606219	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8808	False	NA	17	True	AATAAA	-18	NA	35354473	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361010_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.14	chr17	+	3857	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	210.701852942335	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8514	False	NA	29	True	AATAAA	-30	NA	35354179	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.140	chr17	+	6316	6	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-11	1	intron_retention	TRUE	canonical	0	0	junction_1	279.268616210272	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8809	False	NA	17	True	AATAAA	-18	NA	35354474	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35359208_35359466_35359797_35361059_35361282_35363419_35363574_35363745_35363921
ES.15072.141	chr17	+	2966	21	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	236.027201822163	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8812	False	NA	17	True	AATAAA	-18	NA	35354477	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357664_35360790_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.142	chr17	+	3649	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_22	197.418438679257	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8815	False	NA	17	True	AATAAA	-18	NA	35354480	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.143	chr17	+	3846	24	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	-2	intron_retention	FALSE	canonical	2	39	junction_13	179.075762023852	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCTTTGCCTAGTAGT	8820	False	NA	13	True	AATAAA	-14	NA	35354485	35366279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363283_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.144	chr17	+	4255	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_10	181.388046088735	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8820	False	NA	17	True	AATAAA	-18	NA	35354485	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360888_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.145	chr17	+	3555	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	196.263624260685	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8821	False	NA	29	True	AATAAA	-30	NA	35354486	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.146	chr17	+	3764	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	177.776488884217	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8821	False	NA	17	True	AATAAA	-18	NA	35354486	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364719_35364835_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.147	chr17	+	3937	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_10	181.538788134168	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8821	False	NA	23	True	AATAAA	-24	NA	35354486	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360888_35360962_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.148	chr17	+	4464	21	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	51	junction_4	181.714962234814	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8821	False	NA	17	True	AATAAA	-18	NA	35354486	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364430_35364581_35364729_35364837_35364898_35365001_35365330_35365732_35365880_35366116
ES.15072.15	chr17	+	5185	17	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-1	0	intron_retention	FALSE	canonical	3	160	junction_16	161.885713931156	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8514	False	NA	15	True	AATAAA	-16	NA	35354179	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35363419_35363574_35363745_35363921_35364430_35364581_35364729_35364837_35364898_35365001_35365330_35366116
ES.15072.153	chr17	+	4440	22	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	2	-2	intron_retention	FALSE	canonical	2	6	junction_10	217.553340085398	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCTTTGCCTAGTAGT	8822	False	NA	13	True	AATAAA	-14	NA	35354487	35366279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.154	chr17	+	3449	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	196.401370320802	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	8825	False	NA	22	True	AATAAA	-23	NA	35354490	35366288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363609_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.156	chr17	+	3732	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	160	junction_23	164.061759315098	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8826	False	NA	16	True	AATAAA	-17	NA	35354491	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.157	chr17	+	3438	25	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	205.766550400907	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8826	False	NA	15	True	AATAAA	-16	NA	35354491	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362503_35363189_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.16	chr17	+	3915	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	167.664216814441	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8514	False	NA	31	True	AATAAA	-32	NA	35354179	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.160	chr17	+	4311	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	12	-6	intron_retention	FALSE	canonical	3	346	junction_1	120.765266229203	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8832	False	NA	23	True	AATAAA	-24	NA	35354497	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365330_35365732_35365880_35366116
ES.15072.163	chr17	+	3967	24	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	16	0	intron_retention	FALSE	canonical	2	11	junction_11	177.143945184954	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8836	False	NA	29	True	AATAAA	-30	NA	35354501	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361937_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.164	chr17	+	3690	26	NNC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	179.124760990769	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8839	False	NA	15	True	AATAAA	-16	NA	35354504	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.165	chr17	+	4174	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	19	0	intron_retention	FALSE	canonical	3	346	junction_1	116.324378608274	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8839	False	NA	29	True	AATAAA	-30	NA	35354504	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.17	chr17	+	3751	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	198.274273419423	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.170	chr17	+	3638	23	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	31	-2	intron_retention	TRUE	canonical	0	0	junction_21	226.495179012054	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCTTTGCCTAGTAGT	8851	False	NA	13	True	AATAAA	-14	NA	35354516	35366279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361473_35361582_35361702_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365732_35365880_35366116
ES.15072.171	chr17	+	3778	26	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	169.628374984847	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9000	False	NA	17	True	AATAAA	-18	NA	35354665	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.174	chr17	+	3784	24	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	234.859552609205	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	9021	False	NA	15	True	AATAAA	-16	NA	35354686	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.175	chr17	+	3927	26	NIC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	169.312964654217	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9042	False	NA	17	True	AATAAA	-18	NA	35354707	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.177	chr17	+	3630	25	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	205.652265162985	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9043	False	NA	17	True	AATAAA	-18	NA	35354708	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.178	chr17	+	3603	25	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	210.351388389101	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	9043	False	NA	29	True	AATAAA	-30	NA	35354708	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.179	chr17	+	4024	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	1	intron_retention	FALSE	canonical	3	443	junction_12	102.666125539699	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9055	False	NA	17	True	AATAAA	-18	NA	35354720	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.180	chr17	+	3671	25	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	222.01745035895	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9056	False	NA	17	True	AATAAA	-18	NA	35354721	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.181	chr17	+	3464	24	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	223.653196630294	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTAGTAGTTTCGAG	9061	False	NA	19	True	AATAAA	-20	NA	35354726	35366285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.182	chr17	+	3869	26	NNC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	208.107072441087	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9076	False	NA	17	True	AATAAA	-18	NA	35354741	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
ES.15072.184	chr17	+	3557	25	NNC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	244.122621169499	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	9085	False	NA	31	True	AATAAA	-32	NA	35354750	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354790_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362663_35363175_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.185	chr17	+	3845	24	NIC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	33	1	intron_retention	FALSE	canonical	3	160	junction_23	152.129943958352	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9087	False	NA	17	True	AATAAA	-18	NA	35354752	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.186	chr17	+	3878	26	NNC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.663517161161	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9088	False	NA	17	True	AATAAA	-18	NA	35354753	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358290_35359215_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.187	chr17	+	3659	25	NIC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	148	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	194.894411405823	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	9202	False	NA	17	True	AATAAA	-18	NA	35354867	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.188	chr17	+	3614	24	ISM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	870	17	-75	0	3prime_fragment	FALSE	canonical	3	186	junction_10	157.294697711545	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	9358	False	NA	15	True	AATAAA	-16	NA	35355023	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.189	chr17	+	3608	24	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	169.083418076496	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTAGTTTCGAGTACCT	9424	False	NA	24	True	AATAAA	-25	NA	35355089	35366290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.190	chr17	+	3391	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-204	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_22	165.888323731398	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	NA	False	NA	16	True	AATAAA	-17	NA	35357344	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.191	chr17	+	3371	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-204	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	206.12676132792	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	NA	False	NA	17	True	AATAAA	-18	NA	35357344	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35366116
ES.15072.193	chr17	+	4480	16	NIC	ENSMUSG00000024392.18	novel	3611	24	NA	NA	458	0	intron_retention	FALSE	canonical	3	443	junction_7	96.0834359640967	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	NA	False	NA	15	True	AATAAA	-16	NA	35358006	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001
ES.15072.194	chr17	+	3090	20	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	443	junction_7	107.800241032936	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	228	False	NA	17	True	AATAAA	-18	NA	35359207	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.195	chr17	+	2471	15	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-150	0	intron_retention	FALSE	canonical	3	160	junction_14	181.326743077523	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	1823	False	NA	15	True	AATAAA	-16	NA	35360802	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.196	chr17	+	2510	15	NNC	ENSMUSG00000024392.18	novel	3787	24	NA	NA	73	0	intron_retention	FALSE	canonical	0	0	junction_8	206.472276638798	1140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	2046	False	NA	15	True	AATAAA	-16	NA	35361025	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364210_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.197	chr17	+	2184	13	NIC	ENSMUSG00000024392.18	novel	3787	24	NA	NA	715	0	intron_retention	FALSE	canonical	3	624	junction_2	78.4644293082328	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	2688	False	NA	15	True	AATAAA	-16	NA	35361667	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.198	chr17	+	2699	11	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	765	-6	intron_retention	FALSE	canonical	3	160	junction_10	209.49787588422	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	2738	False	NA	23	True	AATAAA	-24	NA	35361717	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35361816_35361901_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.199	chr17	+	3420	3	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	1630	1	intron_retention	FALSE	canonical	3	700	junction_1	49.5	1139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	3603	False	NA	17	True	AATAAA	-18	NA	35362582	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35363745_35363921_35364898_35365001
ES.15072.2	chr17	+	4114	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-204	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	184.12314248139	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8284	False	NA	30	True	AATAAA	-31	NA	35353949	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.20	chr17	+	3620	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	176.42494833978	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGTAGTTTCGAGTAC	8515	False	NA	22	True	AATAAA	-23	NA	35354180	35366288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.200	chr17	+	1058	9	NIC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-1290	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	301.457267908737	1137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	4594	False	NA	17	True	AATAAA	-18	NA	35363573	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35366116
ES.15072.201	chr17	+	4345	5	NNC	ENSMUSG00000024392.18	novel	683	2	NA	NA	120	87289	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCACACCATGCTAGCAC	6493	False	NA	NA	False	AATAAA	-21	NA	35365472	35453587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35368576_35368674_35369098_35369203_35369680_35369786_35370103_35453560
ES.15072.202	chr17	+	4675	1	Genic_Genomic	ENSMUSG00000024392.18	novel	NA	NA	NA	NA	120	3849	mono-exon	FALSE	NA	NA	NA	NA	NA	1147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATAACTTGGGCTGG	6493	False	NA	NA	False	NA	NA	NA	35365472	35370147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_35365500_35370100
ES.15072.203	chr17	+	4138	6	NNC	ENSMUSG00000024392.18	novel	683	2	NA	NA	120	3846	intron_retention	FALSE	non_canonical	0	0	junction_2	0.8	1147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGATAACTTGGGC	6493	False	NA	NA	False	NA	NA	NA	35365472	35370144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35368388_35368495_35368576_35368674_35368771_35368884_35369098_35369203_35369680_35369786
ES.15072.204	chr17	+	4470	3	NNC	ENSMUSG00000024392.18	novel	683	2	NA	NA	120	3849	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATAACTTGGGCTGG	6493	False	NA	NA	False	NA	NA	NA	35365472	35370147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35368576_35368674_35369098_35369203
ES.15072.205	chr17	+	3883	5	NNC	ENSMUSG00000024392.18	novel	683	2	NA	NA	486	3849	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATAACTTGGGCTGG	6859	False	NA	NA	False	NA	NA	NA	35365838	35370147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35368576_35368674_35368771_35368884_35369098_35369203_35369680_35369786
ES.15072.206	chr17	+	1314	4	Antisense	novelGene_ENSMUSG00000024393.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATAACTTGGGCTGG	9542	False	NA	NA	False	NA	NA	NA	35368521	35370147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_35368576_35368674_35369098_35369203_35369680_35369786
ES.15072.207	chr17	+	1385	3	Antisense	novelGene_ENSMUSG00000024393.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATAACTTGGGCTGG	9577	False	NA	NA	False	NA	NA	NA	35368556	35370147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_35368576_35368674_35369680_35369786
ES.15072.208	chr17	+	5694	24	Antisense	novelGene_ENSMUSG00000064853.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACTAACGGCCCATCCG	NA	False	NA	NA	False	NA	NA	NA	35371644	35383846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_35371761_35372026_35372102_35372202_35372341_35372481_35372717_35372897_35372988_35373086_35373213_35373440_35373576_35373770_35374037_35374341_35376183_35376322_35376540_35376857_35377155_35377367_35377560_35377911_35378389_35378754_35378969_35379073_35379169_35379430_35379571_35379728_35379809_35380003_35380158_35380310_35380451_35380614_35380688_35380781_35380886_35381177_35381359_35381850_35382025_35383712
ES.15072.209	chr17	+	163	1	Intergenic	novelGene_12581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAAATAAATAAATAAAT	6254	False	NA	NA	False	NA	NA	NA	35400352	35400515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35400400_35400500
ES.15072.210	chr17	+	176	1	Intergenic	novelGene_12582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAGAGGGTTTAAG	254	False	NA	NA	False	NA	NA	NA	35400937	35401113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35400900_35401100
ES.15072.211	chr17	+	1129	3	NNC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	-7546	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGGCCCTTGCCAGTGT	5185	False	NA	NA	False	AATAAA	-12	NA	35405868	35415278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35406083_35414025_35414342_35414679
ES.15072.212	chr17	+	250	1	Intergenic	novelGene_12585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACTAAATTTTA	3533	False	NA	NA	False	NA	NA	NA	35449411	35449661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35449400_35449700
ES.15072.213	chr17	+	281	1	Intergenic	novelGene_12586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAACAAACAAACAATCAC	7415	False	NA	NA	False	AATAAA	-8	NA	35453293	35453574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35453300_35453600
ES.15072.23	chr17	+	3690	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	243.311171936039	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8515	False	NA	15	True	AATAAA	-16	NA	35354180	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.24	chr17	+	3791	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_22	204.026648416056	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8515	False	NA	16	True	AATAAA	-17	NA	35354180	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
ES.15072.25	chr17	+	4490	22	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	intron_retention	FALSE	canonical	3	160	junction_21	161.112346543078	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8515	False	NA	31	True	AATAAA	-32	NA	35354180	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.26	chr17	+	6106	19	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	-5	intron_retention	FALSE	canonical	3	14	junction_16	179.552160652724	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTAGTTTCGAGTACCT	8515	False	NA	24	True	AATAAA	-25	NA	35354180	35366290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35355212_35357347_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
ES.15072.28	chr17	+	3872	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	173.584727438793	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8515	False	NA	30	True	AATAAA	-31	NA	35354180	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.3	chr17	+	3905	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-199	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_23	184.283407530671	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8289	False	NA	30	True	AATAAA	-31	NA	35353954	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.31	chr17	+	3528	24	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.584190144816	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354408_35357678_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.32	chr17	+	3906	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	174.725137287112	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363961_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.33	chr17	+	3877	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	204.847260172061	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8515	False	NA	17	True	AATAAA	-18	NA	35354180	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.34	chr17	+	4407	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	434	junction_1	115.579578165387	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8515	False	NA	29	True	AATAAA	-30	NA	35354180	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.36	chr17	+	6154	15	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	4	1	intron_retention	FALSE	canonical	3	51	junction_2	181.137561887452	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8519	False	NA	17	True	AATAAA	-18	NA	35354184	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357759_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35361987_35362308_35363419_35363574_35363745_35363921_35364430_35364581_35364898_35365001_35365330_35365732_35365880_35366116
ES.15072.37	chr17	+	3876	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	169.026502064025	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8523	False	NA	16	True	AATAAA	-17	NA	35354188	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361937_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.38	chr17	+	3632	24	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	221.449862469819	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8524	False	NA	15	True	AATAAA	-16	NA	35354189	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.39	chr17	+	3738	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	174.274268993829	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8524	False	NA	17	True	AATAAA	-18	NA	35354189	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361802_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.41	chr17	+	3846	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	176.995051523733	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8524	False	NA	29	True	AATAAA	-30	NA	35354189	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.43	chr17	+	3456	22	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	212.122189148735	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8525	False	NA	15	True	AATAAA	-16	NA	35354190	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.44	chr17	+	1397	8	ISM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	39	6181	-11	-252	5prime_fragment	FALSE	canonical	3	434	junction_1	121.188670582489	1003	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATATGCCATGTTTTGT	8527	False	NA	NA	False	AATAAA	-21	NA	35354192	35360117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797
ES.15072.45	chr17	+	3718	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	212.737588741426	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTAGTTTCGAGTACCT	8527	False	NA	24	True	AATAAA	-25	NA	35354192	35366290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.46	chr17	+	3600	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	226.423636626436	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8527	False	NA	17	True	AATAAA	-18	NA	35354192	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.48	chr17	+	3816	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	225.991560904384	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8527	False	NA	29	True	AATAAA	-30	NA	35354192	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35361816_35361898_35361941_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.5	chr17	+	4791	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	434	junction_1	115.432934627403	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8484	False	NA	29	True	AATAAA	-30	NA	35354149	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.51	chr17	+	3685	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_22	232.253031625925	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGCCTAGTAGTTTC	8528	False	NA	16	True	AATAAA	-17	NA	35354193	35366282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35366116
ES.15072.52	chr17	+	4392	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-10	0	intron_retention	FALSE	canonical	3	276	junction_13	133.397686293029	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8528	False	NA	30	True	AATAAA	-31	NA	35354193	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.55	chr17	+	4534	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_10	183.624371264335	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGCCTAGTAGTTT	8529	False	NA	15	True	AATAAA	-16	NA	35354194	35366281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361490_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.56	chr17	+	3823	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	210.727251204015	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGCCTAGTAGTTTCGA	8529	False	NA	18	True	AATAAA	-19	NA	35354194	35366284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361535_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.58	chr17	+	4564	21	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-9	1	intron_retention	FALSE	canonical	3	160	junction_20	164.118219585761	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8529	False	NA	17	True	AATAAA	-18	NA	35354194	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.59	chr17	+	3677	23	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	242.756058899117	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8531	False	NA	17	True	AATAAA	-18	NA	35354196	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35364124_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.62	chr17	+	3755	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	210.913818629527	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8533	False	NA	17	True	AATAAA	-18	NA	35354198	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363169_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.63	chr17	+	5141	21	NNC	ENSMUSG00000024392.18	novel	3536	24	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	14	junction_19	221.861871442571	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCCTTTGCCTAGTAG	8533	False	NA	12	True	AATAAA	-13	NA	35354198	35366278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35355212_35357347_35357466_35357561_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35366116
ES.15072.64	chr17	+	3711	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	203.487929863174	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTTCGAGTACCTTTT	8534	False	NA	27	True	AATAAA	-28	NA	35354199	35366293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360867_35360962_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.65	chr17	+	3893	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	171.459177648792	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8536	False	NA	17	True	AATAAA	-18	NA	35354201	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365139_35365221_35365330_35365732_35365880_35366116
ES.15072.67	chr17	+	5128	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	intron_retention	FALSE	canonical	3	443	junction_10	100.615143118685	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8538	False	NA	17	True	AATAAA	-18	NA	35354203	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.68	chr17	+	3881	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	175.380847300952	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8538	False	NA	17	True	AATAAA	-18	NA	35354203	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357578_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.69	chr17	+	3749	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.319669500824	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8538	False	NA	17	True	AATAAA	-18	NA	35354203	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360888_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.7	chr17	+	3960	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8489	False	NA	30	True	AATAAA	-31	NA	35354154	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.70	chr17	+	5917	15	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	160	junction_14	198.641727022007	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8539	False	NA	30	True	AATAAA	-31	NA	35354204	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361816_35361898_35363419_35363574_35363745_35363921_35363976_35364112_35364729_35364837_35364898_35365001_35365330_35366116
ES.15072.71	chr17	+	4137	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	-6	intron_retention	FALSE	canonical	3	434	junction_1	107.51701847968	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	8539	False	NA	23	True	AATAAA	-24	NA	35354204	35366289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.72	chr17	+	4604	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	-2	intron_retention	FALSE	canonical	3	276	junction_10	131.311219488802	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCTTTGCCTAGTAGT	8539	False	NA	13	True	AATAAA	-14	NA	35354204	35366279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.73	chr17	+	3745	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	226.282820670407	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8539	False	NA	17	True	AATAAA	-18	NA	35354204	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.74	chr17	+	3769	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	199.260438176328	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCTTTGCCTAGTAGT	8540	False	NA	13	True	AATAAA	-14	NA	35354205	35366279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363961_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.76	chr17	+	3827	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.796198245445	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8542	False	NA	31	True	AATAAA	-32	NA	35354207	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357534_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.77	chr17	+	4583	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	intron_retention	FALSE	canonical	3	25	junction_20	186.647632835177	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8543	False	NA	17	True	AATAAA	-18	NA	35354208	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.78	chr17	+	5338	18	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	intron_retention	FALSE	canonical	3	434	junction_1	92.796126574693	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8543	False	NA	17	True	AATAAA	-18	NA	35354208	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35363419_35363574_35363745_35363921_35364430_35364581_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.79	chr17	+	3741	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	214.846840634336	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8543	False	NA	17	True	AATAAA	-18	NA	35354208	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357751_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.8	chr17	+	3925	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	171.459177648792	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8490	False	NA	29	True	AATAAA	-30	NA	35354155	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365254_35365330_35365732_35365880_35366116
ES.15072.80	chr17	+	3821	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_22	217.774152729892	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8543	False	NA	17	True	AATAAA	-18	NA	35354208	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
ES.15072.81	chr17	+	4006	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	5	1	intron_retention	FALSE	canonical	3	434	junction_1	110.861204202472	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8543	False	NA	17	True	AATAAA	-18	NA	35354208	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.83	chr17	+	6612	15	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	7	1	intron_retention	FALSE	canonical	3	276	junction_10	126.347996923302	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8545	False	NA	17	True	AATAAA	-18	NA	35354210	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361898_35363419_35363574_35363745_35363921_35364430_35364581_35364898_35365001
ES.15072.85	chr17	+	4446	23	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	8	1	intron_retention	FALSE	canonical	3	434	junction_1	109.665042231348	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8546	False	NA	17	True	AATAAA	-18	NA	35354211	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.86	chr17	+	3668	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	217.521004787192	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8546	False	NA	17	True	AATAAA	-18	NA	35354211	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ES.15072.87	chr17	+	4100	24	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	9	1	intron_retention	FALSE	canonical	3	22	junction_1	168.226150782758	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8547	False	NA	17	True	AATAAA	-18	NA	35354212	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.89	chr17	+	3794	27	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	180.452410582976	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8549	False	NA	17	True	AATAAA	-18	NA	35354214	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35360867_35360962_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.9	chr17	+	3932	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	166.80136210475	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGTTTCGAGTACCTTT	8490	False	NA	26	True	AATAAA	-27	NA	35354155	35366292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.91	chr17	+	4472	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	13	1	intron_retention	FALSE	canonical	3	434	junction_1	113.156866210188	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8551	False	NA	17	True	AATAAA	-18	NA	35354216	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.92	chr17	+	5691	17	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	14	1	intron_retention	FALSE	canonical	3	160	junction_16	154.721524035927	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGAGTACCTTTTCTTT	8552	False	NA	31	True	AATAAA	-32	NA	35354217	35366297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35360600_35360805_35361059_35361282_35361582_35361702_35362659_35363126_35363419_35363574_35363745_35363921_35364430_35364581_35364729_35364837_35364898_35365001_35365330_35366116
ES.15072.93	chr17	+	3710	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	179.476733647024	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCGAGTACCTTTTCT	8552	False	NA	29	True	AATAAA	-30	NA	35354217	35366295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.95	chr17	+	3741	25	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	192.654262684623	1143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8564	False	NA	17	True	AATAAA	-18	NA	35354229	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.97	chr17	+	3762	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	178.059739507092	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCCTAGTAGTTTCG	8777	False	NA	17	True	AATAAA	-18	NA	35354442	35366283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15072.99	chr17	+	3716	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	154.706302168191	1143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCGAGTACCTTTTCTT	8782	False	NA	30	True	AATAAA	-31	NA	35354447	35366296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ES.15073.1	chr17	+	1365	3	NNC	ENSMUSG00000024403.17	novel	483	3	NA	NA	-86	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTGTTGGTGAAAGCAG	8889	False	NA	24	True	AATAAA	-16	NA	35454767	35457739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35454893_35456092_35456194_35456600
ES.15073.2	chr17	+	2294	3	FSM	ENSMUSG00000024403.17	ENSMUST00000068261.9	1528	3	-768	2	-84	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGGTGAAAGCAGCC	8891	False	NA	26	True	AATAAA	-18	NA	35454769	35457741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35455822_35456092_35456194_35456600
ES.15074.1	chr17	-	6887	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	15	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	133.053393626602	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTGGGTTCAATAAG	NA	False	NA	43	True	AAAAAG	-44	NA	35383858	35368007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381877_35382023_35383710
ES.15074.10	chr17	-	4681	27	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	135.412497128951	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383845	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35375238_35378807_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.11	chr17	-	6593	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	132.798682222377	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383860	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378227_35378874_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.12	chr17	-	3552	14	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-1314	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	130.83790052205	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	6717	False	NA	-1	True	AATAAA	-21	NA	35373549	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369923_35370145_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441
ES.15074.13	chr17	-	6932	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	133.538242545805	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383908	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380895_35381177_35381356_35381847_35382023_35383710
ES.15074.15	chr17	-	3894	22	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	134.672610497237	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383861	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369502_35375820_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.16	chr17	-	5234	21	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	3659	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	134.632314100293	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	1980	False	NA	-1	True	AATAAA	-21	NA	35378286	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371658_35371698_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911
ES.15074.17	chr17	-	4865	30	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	136.166331803298	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383886	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373520_35376055_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.19	chr17	-	6971	30	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	25	0	intron_retention	FALSE	canonical	3	176	junction_19	119.359905990852	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383848	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.2	chr17	-	6921	31	FSM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	-32	-1	-32	1	multi-exon	FALSE	canonical	3	176	junction_20	122.598119434553	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAAAGTCATGGGTGGG	NA	False	NA	0	True	AATAAA	-22	NA	35383905	35368050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.21	chr17	-	8253	30	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	323	0	261	0	3prime_fragment	FALSE	canonical	3	176	junction_20	122.439822390493	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383550	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847
ES.15074.22	chr17	-	6835	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_2	127.495799495077	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383851	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368546_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.23	chr17	-	6801	32	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	132.676842896562	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGGAAAGTCATGGGTG	NA	False	NA	-2	True	AATAAA	-20	NA	35383879	35368052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35376901_35376992_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.26	chr17	-	6705	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	136.763660703013	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGGGGGAA	NA	False	NA	-13	True	AATAAA	-9	NA	35383826	35368063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373888_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.28	chr17	-	4291	15	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-3907	-24	intron_retention	FALSE	canonical	3	318	junction_14	69.3811198808319	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	4124	False	NA	5	True	NA	NA	NA	35376142	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
ES.15074.29	chr17	-	1666	11	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	28	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	165.343763111888	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383845	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369106_35379991_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.30	chr17	-	6926	30	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-29	-24	intron_retention	FALSE	canonical	0	0	junction_13	135.9775808618	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383840	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373573_35373888_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.31	chr17	-	4634	24	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	20	-24	intron_retention	FALSE	non_canonical	0	0	junction_11	144.000144402364	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383853	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369882_35371593_35371762_35372027_35372342_35372482_35372717_35372897_35372984_35373083_35373281_35377151_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.32	chr17	-	2967	13	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2160	-24	intron_retention	FALSE	canonical	3	318	junction_12	69.6682615447426	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5871	False	NA	5	True	NA	NA	NA	35374395	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35374037_35374341
ES.15074.33	chr17	-	6804	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-13	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	141.948096930611	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383824	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376869_35377156_35377368_35377560_35377911_35378406_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.34	chr17	-	2698	17	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2584	-24	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_11	113.285435267514	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5447	False	NA	5	True	NA	NA	NA	35374819	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372520_35372618_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
ES.15074.35	chr17	-	6845	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-8	-24	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_17	132.735727418557	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383881	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376869_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.37	chr17	-	6714	30	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-8	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	137.240105695009	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383881	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.39	chr17	-	4045	12	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2149	-24	intron_retention	TRUE	non_canonical	0	0	junction_7	142.933435354184	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5882	False	NA	5	True	NA	NA	NA	35374384	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35370019_35370837_35372342_35372482_35372717_35372897_35372984_35373083_35374037_35374341
ES.15074.4	chr17	-	6718	30	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	137.80939463945	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383837	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.40	chr17	-	2812	16	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2626	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	140.041168550141	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5405	False	NA	5	True	NA	NA	NA	35374861	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372224_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
ES.15074.42	chr17	-	7225	29	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-13	-24	intron_retention	FALSE	canonical	3	176	junction_20	122.404580704935	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383824	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.45	chr17	-	3644	14	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-3122	-24	intron_retention	FALSE	canonical	3	318	junction_13	66.9237842579773	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	4909	False	NA	5	True	NA	NA	NA	35375357	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35374037_35374341
ES.15074.49	chr17	-	6901	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-26	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	145.754973233239	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383837	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376186_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378476_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.5	chr17	-	6813	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	48	junction_6	125.217251207651	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383824	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369659_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.50	chr17	-	2569	15	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2309	-24	intron_retention	FALSE	canonical	0	0	junction_13	144.345620519866	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5722	False	NA	5	True	NA	NA	NA	35374544	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373888_35374037_35374341
ES.15074.51	chr17	-	8855	27	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	22	-24	intron_retention	FALSE	non_canonical	0	0	junction_4	136.907302462124	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383851	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368577_35368675_35369098_35369203_35369685_35369792_35369923_35370145_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376869_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.52	chr17	-	6431	27	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	1079	-24	intron_retention	FALSE	canonical	3	176	junction_19	118.429391242458	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35380866	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785
ES.15074.54	chr17	-	5598	32	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	27	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	132.676842896562	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	NA	False	NA	5	True	NA	NA	NA	35383846	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35374582_35375808_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.55	chr17	-	2327	7	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	1063	-24	intron_retention	FALSE	non_canonical	0	0	junction_6	188.222755148137	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	9094	False	NA	5	True	NA	NA	NA	35371172	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369923_35370145
ES.15074.56	chr17	-	3941	13	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2103	-24	intron_retention	TRUE	non_canonical	0	0	junction_7	134.568033186027	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATAATAAAAGAA	5928	False	NA	5	True	NA	NA	NA	35374338	35368087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369944_35370758_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083
ES.15074.59	chr17	-	2519	15	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-2141	-27	intron_retention	FALSE	canonical	3	143	junction_6	97.7377791306297	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAGAATAATAAAA	5890	False	NA	2	True	NA	NA	NA	35374376	35368090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341
ES.15074.6	chr17	-	5686	20	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	2979	0	intron_retention	FALSE	non_canonical	0	0	junction_6	139.411883030802	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	1300	False	NA	-1	True	AATAAA	-21	NA	35378966	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369871_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755
ES.15074.60	chr17	-	2199	15	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-1697	-27	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	124.317668306083	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAGAATAATAAAA	6334	False	NA	2	True	NA	NA	NA	35373932	35368090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368365_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767
ES.15074.61	chr17	-	3828	16	ISM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	22	6973	22	1084	5prime_fragment	FALSE	canonical	3	176	junction_5	18.1573370538989	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCTGATCTCAGGGCC	NA	False	NA	NA	False	AGTAAA	-13	NA	35383851	35375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.7	chr17	-	6799	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	132.074154255184	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383835	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369252_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15074.8	chr17	-	7327	28	NIC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	22	0	intron_retention	FALSE	canonical	3	176	junction_19	120.146355651788	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383851	35368051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ES.15075.1	chr17	-	178	1	Intergenic	novelGene_12580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35395370	35395192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35395200_35395400
ES.15076.1	chr17	-	180	1	Intergenic	novelGene_12583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTATTTTATTACAT	NA	False	NA	NA	False	NA	NA	NA	35402529	35402349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35402300_35402500
ES.15077.1	chr17	-	302	3	NNC	ENSMUSG00000073412.7	novel	415	4	NA	NA	1667	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAGGCTTCTCTATAT	NA	False	NA	NA	False	AGTAAA	-18	NA	35405748	35404074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35404287_35405560_35405581_35405678
ES.15077.2	chr17	-	404	4	FSM	ENSMUSG00000073412.7	ENSMUST00000097336.5	415	4	2	9	2	-9	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGCATCAGGCTTCTC	NA	False	NA	NA	False	AGTAAA	-13	NA	35407413	35404079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35404287_35405560_35405581_35405921_35406018_35407332
ES.15078.1	chr17	-	192	1	Intergenic	novelGene_12584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	35411329	35411137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35411100_35411300
ES.15079.1	chr17	-	1851	7	Fusion	ENSMUSG00000024402.6_ENSMUSG00000042419.9	novel	1383	4	NA	NA	20	-1	multi-exon	TRUE	canonical	0	0	junction_1	27.9508497187474	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTCTGCTTGTGTC	NA	False	NA	0	True	AATAAA	-14	NA	35454748	35422141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_35423126_35423350_35423451_35423533_35423639_35424134_35424296_35432184_35432283_35453927_35454208_35454625
ES.15079.2	chr17	-	1509	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	-61	-1	-61	1	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGTCTCCTCTGTTTT	NA	False	NA	0	True	NA	NA	NA	35454829	35439149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
ES.15079.3	chr17	-	1442	4	NNC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	-706	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	32.4995726467629	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGAGTCTCCTCTGTT	NA	False	NA	-2	True	NA	NA	NA	35455474	35439151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35439953_35440112_35440335_35453927_35454208_35455335
ES.15079.4	chr17	-	1626	3	NIC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	75	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGAGTCTCCTCTGTT	NA	False	NA	-2	True	NA	NA	NA	35454788	35439151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35440335_35453927_35454208_35454625
ES.15079.5	chr17	-	1430	4	NNC	ENSMUSG00000042419.9	novel	1447	4	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41.206795556073	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCAGAGTCTCCTCTG	NA	False	NA	-4	True	NA	NA	NA	35454761	35439153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35439953_35440112_35440335_35453934_35454208_35454625
ES.15079.6	chr17	-	177	1	Genic_Genomic	ENSMUSG00000042419.9	novel	NA	NA	NA	NA	-101	-746	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAATAGTCAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	35440734	35440557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_35440600_35440700
ES.1508.1	chr1	-	6791	1	Antisense	novelGene_ENSMUSG00000056268.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTGGAAGTCAATCTG	NA	False	NA	NA	False	NA	NA	NA	139051032	139044241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_139044200_139051000
ES.15080.1	chr17	+	2046	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	-317	10	-317	-10	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGTAAGTGCTCTGTT	NA	False	NA	27	True	AATGAA	-16	NA	35460404	35472673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.10	chr17	+	2968	10	FSM	ENSMUSG00000019432.16	ENSMUST00000173731.8	2848	10	-117	-3	7	3	multi-exon	FALSE	canonical	3	2134	junction_3	141.063246475377	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460728	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.11	chr17	+	3244	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	940.598022536726	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460731	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35468549_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.12	chr17	+	3990	9	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-15	11	intron_retention	FALSE	canonical	3	2129	junction_1	157.059702024421	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTGTCTGTAAGTGC	NA	False	NA	21	True	AATGAA	-10	NA	35460738	35472667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35472085_35472182_35472331_35472448
ES.15080.13	chr17	+	3746	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-14	9	intron_retention	FALSE	canonical	3	59	junction_1	736.668493377993	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGGTGTCTGTAAGT	NA	False	NA	19	True	AATGAA	-8	NA	35460739	35472665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.14	chr17	+	5226	8	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_6	817.909330836486	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460743	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470615_35470828_35472331_35472448
ES.15080.15	chr17	+	5018	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_6	752.144703046553	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460746	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470615_35470828_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.16	chr17	+	3968	9	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-7	6	intron_retention	FALSE	canonical	3	2129	junction_1	149.688843939687	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCTGTGGTGTCTGTA	NA	False	NA	16	True	AATGAA	-5	NA	35460746	35472662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472331_35472448
ES.15080.18	chr17	+	4998	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_6	953.351165334393	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460747	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470615_35470828_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.19	chr17	+	1552	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	751.836976681895	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAACCGTGTCTGTGGT	NA	False	NA	9	True	NA	NA	NA	35460748	35472655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.2	chr17	+	4082	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-168	-2	intron_retention	FALSE	canonical	3	2129	junction_1	153.609975884895	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTCTGTTCATGGCTT	NA	False	NA	35	True	AATGAA	-24	NA	35460553	35472681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.20	chr17	+	1666	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_8	671.17267524833	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460748	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.21	chr17	+	3830	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1164.31763707332	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460750	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35462794_35462888_35463111_35463240_35463420_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.22	chr17	+	4062	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_6	752.144703046553	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460752	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471521_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.23	chr17	+	591	2	ISM	ENSMUSG00000019432.16	ENSMUST00000174164.2	1711	6	-23	6238	4	408	5prime_fragment	FALSE	canonical	3	2129	junction_1	0	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTGGCTTTTTTGC	NA	False	NA	NA	False	NA	NA	NA	35460757	35462608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35460829_35462088
ES.15080.25	chr17	+	1657	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	714.925093978383	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460758	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471740_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.27	chr17	+	5108	9	NIC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	13	4	intron_retention	FALSE	canonical	3	2134	junction_3	142.952789409651	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTGTCTGTGGTGTCTG	NA	False	NA	14	True	AATGAA	-3	NA	35460766	35472660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.29	chr17	+	5191	9	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	127	junction_6	744.50667391233	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460768	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.30	chr17	+	1653	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-10	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	717.216313255631	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACTAAGAATGAAAC	NA	False	NA	-6	True	NA	NA	NA	35460770	35472640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463531_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.31	chr17	+	3651	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-7	3	intron_retention	FALSE	canonical	1	34	junction_8	962.717463007838	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460773	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472237_35472331_35472448
ES.15080.33	chr17	+	4046	8	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2129	junction_1	107.218068839698	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460780	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939
ES.15080.34	chr17	+	3575	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_1	754.905063117865	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460780	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462346_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.36	chr17	+	5069	8	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	3	intron_retention	FALSE	non_canonical	0	0	junction_6	1029.70935070959	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460780	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470615_35470828_35471833_35471939
ES.15080.37	chr17	+	5201	9	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	3	intron_retention	FALSE	canonical	3	2129	junction_1	161.912013142941	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460780	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.4	chr17	+	1603	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	717.228757092185	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460711	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462207_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.40	chr17	+	6240	9	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_5	797.584311765847	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460784	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470615_35470828_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.41	chr17	+	1644	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	698.222571963983	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460785	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472335_35472456
ES.15080.45	chr17	+	1575	12	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1106.42627745278	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAACCGTGTCTGTGG	NA	False	NA	8	True	NA	NA	NA	35460796	35472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35462794_35462888_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.50	chr17	+	1469	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	25	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	942.407242119881	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACTAAGAATGAAAC	NA	False	NA	-6	True	NA	NA	NA	35460805	35472640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470231_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.51	chr17	+	2020	11	NIC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	197	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	717.228757092185	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACTAAGAATGAAAC	NA	False	NA	-6	True	NA	NA	NA	35461168	35472640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35461600_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.52	chr17	+	2020	10	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	127	junction_7	707.372446295286	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35461654	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.54	chr17	+	1677	11	FSM	ENSMUSG00000019432.16	ENSMUST00000172549.2	1770	11	74	19	74	-19	multi-exon	FALSE	canonical	0	0	junction_1	717.228757092185	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTTTAACAAAACTAAGA	NA	False	NA	-13	True	NA	NA	NA	35461716	35472633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35461812_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.55	chr17	+	3161	10	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	658	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	754.905063117865	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35462300	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35468454_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.56	chr17	+	3510	8	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	1387	3	intron_retention	FALSE	canonical	3	127	junction_5	791.577422825165	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35463029	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
ES.15080.57	chr17	+	1055	8	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	1834	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	818.801887279362	1158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35463476	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472309_35472465
ES.15080.58	chr17	+	3800	5	NIC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	5522	-1	intron_retention	FALSE	canonical	3	2289	junction_1	116.276341101705	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAACCGTGTCTGTGGT	NA	False	NA	9	True	NA	NA	NA	35467164	35472655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.59	chr17	+	4194	5	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	6283	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1094.37128069042	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35467925	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35470615_35470828_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.6	chr17	+	3393	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	713.572168739785	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	False	NA	13	True	AATGAA	-2	NA	35460716	35472659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35468549_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.60	chr17	+	2075	5	NNC	ENSMUSG00000019432.16	novel	2848	10	NA	NA	7174	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	1190.37872124799	1154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35468816	35472656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35470355_35471722_35471833_35471958_35472085_35472237_35472331_35472448
ES.15080.7	chr17	+	1596	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_1	920.681899463653	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTCTGTTCATGGCTT	NA	False	NA	35	True	AATGAA	-24	NA	35460723	35472681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462222_35462427_35463116_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ES.15080.8	chr17	+	3875	10	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	2	7	intron_retention	FALSE	canonical	3	127	junction_7	705.843388358132	1160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGTGGTGTCTGTAA	NA	False	NA	17	True	AATGAA	-6	NA	35460723	35472663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
ES.15081.1	chr17	-	4223	2	Antisense	novelGene_ENSMUSG00000098269.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	2	19	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTACATTTGTAATCCC	NA	False	NA	NA	False	NA	NA	NA	35471703	35467266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35470613_35470826
ES.15081.3	chr17	-	1080	1	Intergenic	novelGene_12587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGAACTACAGTCTAG	NA	False	NA	NA	False	NA	NA	NA	35471707	35470627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35470600_35471700
ES.15082.1	chr17	+	1623	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	327	152	-39	-6	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTTGAAAGTGA	2046	False	NA	NA	False	NA	NA	NA	35482032	35486323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ES.15082.2	chr17	+	1599	8	NIC	ENSMUSG00000073411.13	novel	1744	7	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	17.01020102102	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTTGAAAGTGA	2085	False	NA	NA	False	NA	NA	NA	35482071	35486323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485442_35485491_35485663_35485703_35485841
ES.15082.3	chr17	+	1913	6	NIC	ENSMUSG00000073411.13	novel	1744	7	NA	NA	0	-6	intron_retention	FALSE	canonical	3	37	junction_2	6.8818602136341	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTTGAAAGTGA	2085	False	NA	NA	False	NA	NA	NA	35482071	35486323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35482163_35482354_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663
ES.15082.4	chr17	+	1730	7	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.033918659632	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGGGTCACTATGCT	2087	False	NA	22	True	AATAAA	-21	NA	35482073	35486471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485313_35485663_35485703_35485841
ES.15082.5	chr17	+	1760	7	NIC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2	-6	intron_retention	FALSE	canonical	3	37	junction_3	6.79256129077161	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATTTGAAAGTGA	2087	False	NA	NA	False	NA	NA	NA	35482073	35486323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485491_35485663_35485703_35485841
ES.15083.1	chr17	+	153	1	Intergenic	novelGene_12588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35498489	35498642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35498500_35498600
ES.15084.1	chr17	+	167	1	Intergenic	novelGene_12589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATACTTAAAAA	8309	False	NA	NA	False	NA	NA	NA	35525575	35525742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35525600_35525700
ES.15085.1	chr17	+	175	1	Intergenic	novelGene_12590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATCTTAATCTTATAT	1654	False	NA	NA	False	NA	NA	NA	35535765	35535940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35535800_35535900
ES.15086.1	chr17	+	1530	3	ISM	ENSMUSG00000091705.9	ENSMUST00000074806.12	1262	7	-16	1593	-16	-1593	5prime_fragment	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTAGAGTGTTTCCTGT	4864	False	NA	NA	False	ATTAAA	-15	NA	35561201	35563177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35561373_35561575_35561846_35562088
ES.15086.2	chr17	+	1633	5	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	859	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	2.23606797749979	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5739	False	NA	NA	False	NA	NA	NA	35562076	35565738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
ES.15086.3	chr17	+	1837	5	NNC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	879	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.58602010819715	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTG	5759	False	NA	NA	False	NA	NA	NA	35562096	35565736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35562591_35563730_35564007_35564133_35564251_35564429_35564463_35564819
ES.15086.4	chr17	+	1598	3	ISM	ENSMUSG00000091705.9	ENSMUST00000173115.2	1150	5	-140	0	-140	0	intron_retention	FALSE	canonical	1	5	junction_2	1	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	7497	False	NA	NA	False	NA	NA	NA	35563834	35565738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35564007_35564133_35564251_35564429
ES.15087.1	chr17	-	6652	5	Antisense	novelGene_ENSMUSG00000091655.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.433012701892219	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTGTTTTCAATAATG	NA	False	NA	NA	False	NA	NA	NA	35568955	35554636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35554822_35556051_35561772_35561946_35562418_35568274_35568379_35568783
ES.15087.10	chr17	-	3074	5	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	35568950	35559338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35561946_35562238_35562330_35562418_35564120_35564221_35568787
ES.15087.11	chr17	-	2653	5	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGGTGGGAGTTTA	NA	False	NA	NA	False	AGTAAA	-12	NA	35568955	35559740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35562186_35562418_35564105_35564221_35568274_35568379_35568783
ES.15087.12	chr17	-	2232	1	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGAAATCTTTGGTGG	NA	False	NA	NA	False	AGTAAA	-5	NA	35561979	35559747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35559700_35562000
ES.15087.2	chr17	-	6409	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGCAGATGTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	35568952	35556584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561358_35561559_35562418_35564120_35564221_35568274
ES.15087.3	chr17	-	5970	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTGCAGATGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	35568938	35556585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561826_35561946_35562418_35568274_35568379_35568783
ES.15087.4	chr17	-	5921	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATTCTGCAGATGTCTG	NA	False	NA	NA	False	NA	NA	NA	35568949	35556587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35561946_35562418_35564120_35564221_35568783
ES.15087.5	chr17	-	4294	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTTGTACTTATCTAC	NA	False	NA	NA	False	AATAGA	-22	NA	35568974	35558254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35561946_35562418_35564105_35564221_35568783
ES.15087.6	chr17	-	3420	3	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAAAGACAGATGT	NA	False	NA	NA	False	NA	NA	NA	35568971	35559300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35562418_35564105_35564221_35568783
ES.15087.7	chr17	-	6465	2	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	35567457	35559304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35562418_35564105
ES.15087.8	chr17	-	3211	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAACAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	35568942	35559305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35561946_35562418_35564105_35564221_35568783
ES.15087.9	chr17	-	3189	4	Antisense	novelGene_ENSMUSG00000091705.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	35568970	35559336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35561772_35561946_35562418_35564120_35564221_35568787
ES.15088.1	chr17	+	175	1	Intergenic	novelGene_12591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTTAATCTTAT	6666	False	NA	NA	False	NA	NA	NA	35574201	35574376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35574200_35574400
ES.15089.1	chr17	-	2899	2	FSM	ENSMUSG00000079505.3	ENSMUST00000113886.3	3122	2	228	-5	228	5	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTATGTGTCGTAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	35599040	35595991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35598714_35598863
ES.15089.2	chr17	-	3143	2	NNC	ENSMUSG00000079505.3	novel	3122	2	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTATGTGTCGTAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	35599249	35595991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35598714_35598828
ES.15089.3	chr17	-	607	2	NNC	ENSMUSG00000079505.3	novel	3122	2	NA	NA	263	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGCTATGTGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	35599005	35595996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35596427_35598828
ES.1509.1	chr1	-	234	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTTAGTCATTTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	139271797	139271563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_139271600_139271800
ES.15090.1	chr17	-	161	1	Intergenic	novelGene_12592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAAACAAATATTTA	1732	False	NA	NA	False	NA	NA	NA	35641959	35641798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35641800_35642000
ES.15091.1	chr17	-	458	1	Intergenic	novelGene_12593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGCACCATGACTTTT	NA	False	NA	NA	False	NA	NA	NA	35656306	35655848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35655800_35656300
ES.15091.2	chr17	-	235	1	Intergenic	novelGene_12594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35656308	35656073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35656100_35656300
ES.15092.1	chr17	+	4420	2	NIC	ENSMUSG00000060550.17	novel	1523	8	NA	NA	0	-8	intron_retention	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCAGGATCTGTGTC	8298	False	NA	NA	False	AATAAA	-17	NA	35658130	35662737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35658698_35658884
ES.15093.1	chr17	+	156	1	NIC	ENSMUSG00000092278.2	novel	1694	2	NA	NA	1106	-1809	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	35665937	35666093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35665900_35666100
ES.15094.1	chr17	+	248	1	Intergenic	novelGene_12595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTATCAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	35680858	35681106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35680900_35681100
ES.15095.1	chr17	-	257	1	Intergenic	novelGene_12596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAACAAAAA	8272	False	NA	NA	False	NA	NA	NA	35735847	35735590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35735600_35735800
ES.15095.2	chr17	-	155	1	Intergenic	novelGene_12597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAAACAAACAAATA	8272	False	NA	NA	False	NA	NA	NA	35735847	35735692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35735700_35735800
ES.15096.1	chr17	-	161	2	Intergenic	novelGene_12598	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35750240	35750004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35750021_35750095
ES.15096.2	chr17	-	236	1	Intergenic	novelGene_12599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35750240	35750004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35750000_35750200
ES.15096.3	chr17	-	122	1	Intergenic	novelGene_12600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTCTGAAGACAG	NA	False	NA	NA	False	NA	NA	NA	35750240	35750118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35750100_35750200
ES.15097.1	chr17	+	4205	3	Intergenic	novelGene_12601	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCTGTGTCACTGAGCT	NA	False	NA	NA	False	AATAAA	-25	NA	35752099	35756658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35752192_35752358_35752629_35752815
ES.15098.1	chr17	+	1335	5	NIC	ENSMUSG00000067235.15	novel	1473	7	NA	NA	283	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	3.26917420765551	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTCCAGAGTCTGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	35781276	35785450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35781543_35781722_35781999_35783979_35784256_35784382_35784487_35785037
ES.15099.1	chr17	-	343	1	Intergenic	novelGene_12602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	35798638	35798295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35798300_35798600
ES.15099.2	chr17	-	194	1	Intergenic	novelGene_12603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTCACAGAAT	NA	False	NA	NA	False	NA	NA	NA	35798639	35798445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35798400_35798600
ES.151.1	chr1	+	178	2	Antisense	novelGene_ENSMUSG00000079658.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATACATGC	NA	False	NA	NA	False	NA	NA	NA	16708507	16716457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_16708515_16716286
ES.151.10	chr1	+	1611	3	NNC	ENSMUSG00000025940.7	novel	1710	3	NA	NA	8	-373	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	253.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGGATGGTCATGAA	NA	False	NA	11	True	AATAAA	-22	NA	16735441	16748046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_16736092_16737891_16737998_16747191
ES.151.11	chr1	+	1783	4	NNC	ENSMUSG00000025940.7	novel	1710	3	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	240.428783634572	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTATGTGTTTGTTTG	NA	False	NA	7	True	NA	NA	NA	16735442	16748421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_16735730_16735931_16736092_16737891_16737998_16747191
ES.151.2	chr1	+	180	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATACATGCT	6803	False	NA	NA	False	NA	NA	NA	16716278	16716458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_16716300_16716500
ES.151.3	chr1	+	178	2	Antisense	novelGene_ENSMUSG00000100959.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAATCACATA	6806	False	NA	NA	False	NA	NA	NA	16716281	16777518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_16716434_16777492
ES.151.4	chr1	+	402	1	Antisense	novelGene_ENSMUSG00000079658.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAATGTGTTTGCCTCAT	NA	False	NA	NA	False	AATACA	-24	NA	16727180	16727582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_16727200_16727600
ES.151.5	chr1	+	1302	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-27	435	-24	-355	multi-exon	FALSE	canonical	3	512	junction_1	10.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTGGTATATGTATG	NA	False	NA	29	True	AATAAA	-40	NA	16735406	16748064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_16735730_16737891_16737998_16747191
ES.151.6	chr1	+	1716	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	-3	-3	0	3	multi-exon	FALSE	canonical	3	512	junction_1	10.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGTTTGCCTCCAC	NA	False	NA	25	True	ATTAAA	-15	NA	16735430	16748502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_16735730_16737891_16737998_16747191
ES.151.7	chr1	+	1412	4	NNC	ENSMUSG00000025940.7	novel	1636	3	NA	NA	0	-381	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	240.428783634572	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTAAAATGTGGATG	NA	False	NA	3	True	AATAAA	-14	NA	16735430	16748038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_16735730_16735931_16736092_16737891_16737998_16747191
ES.151.9	chr1	+	3800	2	NIC	ENSMUSG00000025940.7	novel	1710	3	NA	NA	1	9	intron_retention	FALSE	canonical	3	533	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTGTTTGGTTTTGG	NA	False	NA	14	True	NA	NA	NA	16735434	16748428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_16737998_16747191
ES.1510.1	chr1	+	3737	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-288	-1087	intron_retention	TRUE	canonical	3	36	junction_4	7.92464510246358	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTTTAGAAACTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	139349737	139375834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.10	chr1	+	6851	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-67	-1574	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTCTGAGTCTTA	NA	False	NA	27	True	AATAAA	-22	NA	139349958	139379169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.11	chr1	+	5740	2	ISM	ENSMUSG00000033964.13	ENSMUST00000200243.5	2127	9	-66	13189	-66	-13189	5prime_fragment	FALSE	canonical	3	39	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTGTTTAGGATCT	NA	False	NA	NA	False	NA	NA	NA	139349959	139356406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139350065_139350771
ES.1510.12	chr1	+	7973	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-58	-443	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGTGTGATTACTGAAC	NA	False	NA	NA	False	TATAAA	-14	NA	139349967	139380300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.13	chr1	+	4737	11	NNC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-57	153	intron_retention	FALSE	canonical	3	11	junction_1	14.3582728766381	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGTTTGGTTGTTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	139349968	139377074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350056_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.14	chr1	+	5762	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-56	1170	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTTAGCCTCATTGTGA	NA	False	NA	NA	False	NA	NA	NA	139349969	139378091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.16	chr1	+	6421	1	Genic_Genomic	ENSMUSG00000033964.13	novel	NA	NA	NA	NA	-40	-13189	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACATTGTTTAGGATCT	NA	False	NA	NA	False	NA	NA	NA	139349985	139356406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_139350000_139356400
ES.1510.17	chr1	+	4758	10	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-23	-1092	intron_retention	FALSE	canonical	3	36	junction_4	8.08290376865476	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTTGAGTTTAGAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	139350002	139375829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.18	chr1	+	4650	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-104	3815	-10	7	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAACTGTTTAAGCAC	NA	False	NA	NA	False	AATAAA	-37	NA	139350015	139376928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.19	chr1	+	6782	11	NNC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-8	-1575	intron_retention	FALSE	canonical	3	11	junction_1	14.3582728766381	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGGTTCTGAGTCTT	NA	False	NA	26	True	AATAAA	-21	NA	139350017	139379168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350056_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.2	chr1	+	8470	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-112	0	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCCAGGTTCTTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	139349913	139380743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.20	chr1	+	3723	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-28	4666	-28	-844	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATCTAATTGAGTATA	NA	False	NA	NA	False	AATAAA	-23	NA	139350091	139376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.21	chr1	+	6812	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-28	1577	-28	-1577	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTGGTTCTGAGTC	NA	False	NA	24	True	AATAAA	-19	NA	139350091	139379166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.22	chr1	+	1919	4	ISM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-27	22317	-27	-11169	5prime_fragment	FALSE	canonical	3	10	junction_1	19.8662192343351	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAACTGCTATTTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	139350092	139358426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018
ES.1510.23	chr1	+	6981	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-22	-1574	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTCTGAGTCTTA	NA	False	NA	27	True	AATAAA	-22	NA	139350097	139379169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.24	chr1	+	4884	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-14	159	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTGTTGTAATTGTC	NA	False	NA	NA	False	AATAAA	-31	NA	139350105	139377080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.25	chr1	+	8533	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-7	-7	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAAGCACACCCAGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	139350112	139380736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.26	chr1	+	8732	12	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	23.0851818237308	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAAGCACACCCAGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	139350118	139380736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139363207_139363585_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.27	chr1	+	4686	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	6	3669	6	153	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGTTTGGTTGTTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	139350125	139377074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.28	chr1	+	3527	6	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	15	-5187	intron_retention	FALSE	canonical	0	0	junction_5	22.5033330864563	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTAGAAATGTCTTG	NA	False	NA	NA	False	AATAAA	-23	NA	139350134	139364408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139362740
ES.1510.29	chr1	+	3518	12	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	33	-1090	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	20.285564626882	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350152	139375831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139356897_139356966_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.3	chr1	+	6955	12	NNC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-100	-1433	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_3	16.2389186628557	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACTGTGGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	139349925	139379310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350065_139350771_139352006_139356863_139356897_139356966_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.30	chr1	+	8221	10	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-622	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	22.9691150659659	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGGTTCTTTTCACA	NA	False	NA	NA	False	AATAAA	-24	NA	139350769	139380745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139352006_139356966_139357072_139358018_139358089_139359666_139359815_139365177_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.31	chr1	+	4493	10	ISM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	651	3827	-621	-5	3prime_fragment	FALSE	canonical	3	36	junction_3	6.99382443638054	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAATCAAAAAGGAGGAAA	NA	False	NA	NA	False	AATAAA	-25	NA	139350770	139376916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.32	chr1	+	5917	1	Genic_Genomic	ENSMUSG00000033964.13	novel	NA	NA	NA	NA	23610	175	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTTGAATCGGCCTT	NA	False	NA	NA	False	AATAAA	-38	NA	139375001	139380918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_139375000_139380900
ES.1510.33	chr1	+	4271	1	ISM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	26094	259	24822	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAATCTTTGTTTTTA	NA	False	NA	NA	False	AATAGA	-23	NA	139376213	139380484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139376200_139380500
ES.1510.4	chr1	+	4629	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-95	-2	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAAAGGAGGAAACTG	NA	False	NA	NA	False	AATAAA	-28	NA	139349930	139376919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.5	chr1	+	8536	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-180	5	-86	-5	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCACACCCAGGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	139349939	139380738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.6	chr1	+	3631	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	-179	4909	-85	-1087	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTTTAGAAACTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	139349940	139375834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.7	chr1	+	3774	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-79	-841	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAATTGAGTATATCG	NA	False	NA	NA	False	AATAAA	-26	NA	139349946	139376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.8	chr1	+	4774	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	-79	159	intron_retention	FALSE	canonical	3	36	junction_4	7.92464510246358	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTGTTGTAATTGTC	NA	False	NA	NA	False	AATAAA	-31	NA	139349946	139377080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.1510.9	chr1	+	3796	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	-78	-1087	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTTTAGAAACTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	139349947	139375834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ES.15100.1	chr17	-	179	1	Intergenic	novelGene_12604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35800528	35800349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35800300_35800500
ES.15101.1	chr17	+	1483	1	Intergenic	novelGene_12605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGCCTTGAAACTGAC	1816	False	NA	NA	False	AATAAA	-31	NA	35801533	35803016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35801500_35803000
ES.15102.1	chr17	-	219	1	Intergenic	novelGene_12606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTGGATCAGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	35807371	35807152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35807200_35807400
ES.15103.1	chr17	-	177	1	Intergenic	novelGene_12607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	35808674	35808497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35808500_35808700
ES.15104.1	chr17	+	1494	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	-125	-7	-125	7	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTTCCTTCAGTTC	2911	False	NA	7	True	AATAAA	-27	NA	35816789	35821676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
ES.15104.10	chr17	+	643	2	ISM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	3961	3	1158	-3	3prime_fragment	FALSE	canonical	3	4448	junction_1	0	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	6997	False	NA	-3	True	AATAAA	-17	NA	35820875	35821666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35821037_35821184
ES.15104.11	chr17	+	215	1	Intergenic	novelGene_12609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTATTTAT	1193	False	NA	NA	False	NA	NA	NA	35822877	35823092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35822900_35823100
ES.15104.3	chr17	+	3961	4	NIC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	17	-3	intron_retention	FALSE	canonical	3	3795	junction_2	266.616245233148	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	3053	False	NA	-3	True	AATAAA	-17	NA	35816931	35821666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35820121_35820304_35820436_35820877_35821037_35821184
ES.15104.5	chr17	+	2933	6	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	20	2012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1666.82531778228	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGTCCCAGAGACTCAGC	3056	False	NA	NA	False	AATAAA	-17	NA	35816934	35823681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35822828_35823248
ES.15104.7	chr17	+	1324	5	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1798.31963232346	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	3058	False	NA	-3	True	AATAAA	-17	NA	35816936	35821666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35817392_35820023_35820121_35820304_35820436_35820877_35821037_35821184
ES.15104.8	chr17	+	1212	4	NIC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	26	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1961.09770848426	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	3062	False	NA	-3	True	AATAAA	-17	NA	35816940	35821666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35817381_35820304_35820436_35820877_35821037_35821184
ES.15104.9	chr17	+	1250	6	NNC	ENSMUSG00000024406.17	novel	1362	5	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1666.82531778228	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCTGAATTTTGTTTT	3065	False	NA	-3	True	AATAAA	-17	NA	35816943	35821666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184_35821259_35821338
ES.15105.1	chr17	+	2835	19	NNC	ENSMUSG00000040312.15	novel	3054	18	NA	NA	-134	5	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	38.6551707048646	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGAGACTGCGATTTCC	4298	False	NA	25	True	AATAAA	-27	NA	35827862	35841907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.10	chr17	+	2725	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	-60	-9	-60	0	multi-exon	FALSE	canonical	3	44	junction_1	24.5503507751598	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4372	False	NA	20	True	AATAAA	-22	NA	35827936	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.11	chr17	+	2785	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	38.6874620928201	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTTTGAGAGACTGC	4379	False	NA	18	True	AATAAA	-20	NA	35827943	35841900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841337_35841456_35841597
ES.15105.12	chr17	+	5066	16	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-50	1	intron_retention	FALSE	canonical	0	0	junction_3	39.1626806482339	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4382	False	NA	21	True	AATAAA	-23	NA	35827946	35841903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829486_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841340_35841456_35841597
ES.15105.13	chr17	+	2533	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.4780572625949	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4383	False	NA	20	True	AATAAA	-22	NA	35827947	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35829424_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841337_35841456_35841597
ES.15105.14	chr17	+	2696	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.5923016465538	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4383	False	NA	20	True	AATAAA	-22	NA	35827947	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835360_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.15	chr17	+	2815	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	40.6093721604562	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4390	False	NA	20	True	AATAAA	-22	NA	35827954	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841298_35841456_35841597
ES.15105.17	chr17	+	3708	17	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-42	-3	intron_retention	FALSE	canonical	3	14	junction_15	35.0597146843781	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATGTTTGAGAGACTG	4390	False	NA	17	True	AATAAA	-19	NA	35827954	35841899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841337_35841456_35841597
ES.15105.18	chr17	+	4083	17	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-42	2	intron_retention	FALSE	canonical	0	0	junction_1	33.9576942680153	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGATGTTTGAGAG	4390	False	NA	13	True	AATAAA	-15	NA	35827954	35841895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828091_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.19	chr17	+	2519	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	38.2349321249833	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4400	False	NA	20	True	AATAAA	-22	NA	35827964	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835925_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.2	chr17	+	2711	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	32.5386116125864	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4334	False	NA	20	True	AATAAA	-22	NA	35827898	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.21	chr17	+	2511	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	35.9685560486024	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTTTGAGAGACTGC	4524	False	NA	18	True	AATAAA	-20	NA	35828088	35841900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835925_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.22	chr17	+	3652	16	NIC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	16	0	intron_retention	FALSE	canonical	3	44	junction_1	25.7134638316626	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4524	False	NA	20	True	AATAAA	-22	NA	35828088	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35841197_35841340_35841456_35841597
ES.15105.23	chr17	+	2563	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	36.2543876356693	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4532	False	NA	21	True	AATAAA	-23	NA	35828096	35841903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841343_35841456_35841597
ES.15105.24	chr17	+	2589	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.4296734444112	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4535	False	NA	20	True	AATAAA	-22	NA	35828099	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841313_35841456_35841597
ES.15105.25	chr17	+	2597	18	NIC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	36.2543876356693	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGATGTTTGAGAG	4535	False	NA	13	True	AATAAA	-15	NA	35828099	35841895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841298_35841456_35841597
ES.15105.26	chr17	+	2709	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	28	11	28	-1	multi-exon	FALSE	canonical	1	1	junction_1	38.8088461978693	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTGAGAGACTGCG	4536	False	NA	19	True	AATAAA	-21	NA	35828100	35841901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.27	chr17	+	2664	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.7424772822918	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGATGTTTGAGAGA	4536	False	NA	14	True	AATAAA	-16	NA	35828100	35841896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838834_35839079_35839238_35839285_35839436_35839564_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.28	chr17	+	3800	19	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_5	51.7912476518314	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4537	False	NA	20	True	AATAAA	-22	NA	35828101	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35834232_35834323_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841340_35841456_35841597
ES.15105.29	chr17	+	4363	19	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	50.7906621144546	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4544	False	NA	20	True	AATAAA	-22	NA	35828108	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828127_35828664_35828837_35829113_35829181_35829275_35831090_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841235_35841340_35841456_35841597
ES.15105.3	chr17	+	2623	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	28.0148255362583	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4356	False	NA	20	True	AATAAA	-22	NA	35827920	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.30	chr17	+	3228	18	ISM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	71	10	71	0	3prime_fragment	FALSE	canonical	3	17	junction_1	29.5544772924118	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4579	False	NA	20	True	AATAAA	-22	NA	35828143	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.31	chr17	+	3247	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	79	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.1343417071988	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGAGAGACTGCGATT	4587	False	NA	22	True	AATAAA	-24	NA	35828151	35841904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828862_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.32	chr17	+	3146	18	NNC	ENSMUSG00000040312.15	novel	3054	18	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	39.3023943379031	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4601	False	NA	20	True	AATAAA	-22	NA	35828165	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835925_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.33	chr17	+	2899	18	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	97	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	39.9173887406908	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	4892	False	NA	21	True	AATAAA	-23	NA	35828456	35841903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841061_35841197_35841340_35841456_35841597
ES.15105.34	chr17	+	2593	17	NNC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	687	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	33.8594867614676	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATGTTTGAGAGACT	5482	False	NA	16	True	AATAAA	-18	NA	35829046	35841898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839679_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.36	chr17	+	2903	16	NNC	ENSMUSG00000040312.15	novel	439	3	NA	NA	-331	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	44.7420259810493	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	472	False	NA	20	True	AATAAA	-22	NA	35830451	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35831090_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839663_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.37	chr17	+	5796	13	NIC	ENSMUSG00000040312.15	novel	2748	19	NA	NA	-198	1	intron_retention	FALSE	canonical	3	93	junction_1	18.0992633367586	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTGAGAGACTGCGAT	605	False	NA	21	True	AATAAA	-23	NA	35830584	35841903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841340_35841456_35841597
ES.15105.4	chr17	+	5337	16	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-75	-4	intron_retention	FALSE	canonical	1	1	junction_3	41.3037528561268	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATGTTTGAGAGACT	4357	False	NA	16	True	AATAAA	-18	NA	35827921	35841898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35831090_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841340_35841456_35841597
ES.15105.6	chr17	+	3740	16	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-75	-1	intron_retention	FALSE	canonical	3	25	junction_1	29.6647939483827	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTGAGAGACTGCG	4357	False	NA	19	True	AATAAA	-21	NA	35827921	35841901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35841197_35841340_35841456_35841597
ES.15105.7	chr17	+	2444	17	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	46.5965060385433	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4363	False	NA	20	True	AATAAA	-22	NA	35827927	35841902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841298_35841456_35841597
ES.15105.8	chr17	+	2594	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-66	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.8442903492079	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTGAGAGACTGCG	4366	False	NA	19	True	AATAAA	-21	NA	35827930	35841901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835360_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15105.9	chr17	+	4202	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-62	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	38.8776805949494	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGATGTTTGAGAG	4370	False	NA	13	True	AATAAA	-15	NA	35827934	35841895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35828009_35829113_35829181_35829275_35831090_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ES.15106.1	chr17	-	194	1	Intergenic	novelGene_12608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTATAAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	35822163	35821969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35822000_35822200
ES.15107.1	chr17	-	160	1	Intergenic	novelGene_12610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCTAAAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	35823261	35823101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35823100_35823300
ES.15108.1	chr17	-	1648	4	NIC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	-22	9	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	19.7989898732233	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAAGTCTGCTTTTCAA	9311	False	NA	4	True	AATAAA	-29	NA	35827743	35823621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35824082_35825370_35825918_35826774_35827328_35827655
ES.15108.11	chr17	-	173	1	Antisense	novelGene_ENSMUSG00000040312.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTAATA	8000	False	NA	NA	False	NA	NA	NA	35830261	35830088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35830100_35830300
ES.15108.3	chr17	-	4075	1	FSM	ENSMUSG00000118589.2	ENSMUST00000239282.2	67	1	-3143	-865	-3143	865	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9349	False	NA	-5	True	AATAAA	-20	NA	35827705	35823630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35823600_35827700
ES.15108.4	chr17	-	2435	6	NNC	ENSMUSG00000050410.16	novel	1732	4	NA	NA	-4351	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.9499652294686	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCGTTGAATCTAAGTC	9275	False	NA	-6	True	AATAAA	-19	NA	35832072	35823631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35824082_35825370_35825918_35826774_35827437_35827655_35828000_35831274_35831383_35831748
ES.15108.5	chr17	-	1709	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-45	1	-45	-1	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCGTTGAATCTAAGTC	9288	False	NA	-6	True	AATAAA	-19	NA	35827766	35823631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ES.15108.6	chr17	-	2887	3	FSM	ENSMUSG00000118589.2_ENSMUSG00000050410.16	ENSMUST00000159009.2	982	3	14	-1919	14	-1	multi-exon	FALSE	canonical	3	33	junction_2	21	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCGTTGAATCTAAGTC	9351	False	NA	-6	True	AATAAA	-19	NA	35827703	35823631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35825918_35826774_35827328_35827655
ES.15108.8	chr17	-	1754	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	-21	-1	14	1	multi-exon	FALSE	canonical	2	5	junction_3	32.9983164553722	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCGTTGAATCTAAGT	9351	False	NA	-7	True	AATAAA	-18	NA	35827703	35823632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
ES.15108.9	chr17	-	2853	2	ISM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	-54	3	-54	0	intron_retention	FALSE	canonical	3	75	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGCGTTGAATCTAAG	9279	False	NA	-8	True	AATAAA	-17	NA	35827775	35823633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_35824082_35825370
ES.15109.1	chr17	-	1628	2	Antisense	novelGene_ENSMUSG00000040312.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAATTAATTAATTAA	5201	False	NA	NA	False	NA	NA	NA	35836146	35834454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35834622_35834685
ES.15109.2	chr17	-	1486	3	Antisense	novelGene_ENSMUSG00000040312.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAATTAATTAATTAA	5201	False	NA	NA	False	NA	NA	NA	35836146	35834454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35834622_35834685_35835730_35835871
ES.1511.1	chr1	-	2825	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTGGAAGAAGTTAAGC	NA	False	NA	NA	False	NA	NA	NA	139363890	139361065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_139361100_139363900
ES.15110.1	chr17	+	190	1	Intergenic	novelGene_12611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTAGTATTTTTAACTT	4464	False	NA	21	True	NA	NA	NA	35846349	35846539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35846300_35846500
ES.15111.1	chr17	+	175	1	Intergenic	novelGene_12612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAAGAAA	919	False	NA	NA	False	NA	NA	NA	35848117	35848292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35848100_35848300
ES.15112.1	chr17	+	2417	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	-12631	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATTTGCCTTCTTGGG	3195	False	NA	4	True	AATAAA	-18	NA	35850393	35867810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35850558_35865557
ES.15112.2	chr17	+	2309	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	-3185	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTATTTGCCTTCTT	4950	False	NA	1	True	AATAAA	-15	NA	35859839	35867807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35859899_35865557
ES.15112.3	chr17	+	1893	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	2850	-267	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTATTTGCCTTCTTGGG	59	False	NA	4	True	AATAAA	-18	NA	35865874	35867810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35865951_35865993
ES.15113.1	chr17	+	1482	4	NNC	ENSMUSG00000039269.6	novel	1290	2	NA	NA	-3540	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGATTTCTCTCCGCGT	915	False	NA	NA	False	AATAAA	-16	NA	35874806	35879842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35874881_35875045_35875226_35878401_35878518_35878730
ES.15113.2	chr17	+	1494	3	NNC	ENSMUSG00000039269.6	novel	1290	2	NA	NA	-3382	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCTCCGCGTCAGTT	27	False	NA	NA	False	AATAAA	-21	NA	35874964	35879847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_35875226_35878401_35878518_35878730
ES.15114.1	chr17	-	170	1	Intergenic	novelGene_12613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATCTGTGAAAAA	7008	False	NA	NA	False	NA	NA	NA	35890386	35890216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35890200_35890400
ES.15115.1	chr17	+	181	1	Intergenic	novelGene_12614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATCACAGCTAGGCAT	3045	False	NA	NA	False	NA	NA	NA	35891177	35891358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35891200_35891400
ES.15116.1	chr17	-	2755	4	Antisense	novelGene_ENSMUSG00000090509.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCATCGAGTGCATC	1747	False	NA	NA	False	NA	NA	NA	35914628	35911450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_35912503_35912594_35913769_35914002_35914380_35914476
ES.15117.1	chr17	-	168	1	Intergenic	novelGene_12615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATGTTTATCAG	869	False	NA	NA	False	NA	NA	NA	35935099	35934931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35934900_35935100
ES.15118.1	chr17	+	177	1	Intergenic	novelGene_12616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACCCATTAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	35936772	35936949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35936800_35936900
ES.15119.1	chr17	-	173	1	Intergenic	novelGene_12617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACCATTAACTGTA	NA	False	NA	NA	False	NA	NA	NA	35940634	35940461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_35940500_35940600
ES.1512.1	chr1	-	259	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGTATAT	6102	False	NA	NA	False	AAAACA	-33	NA	139371000	139370741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_139370700_139371000
ES.15120.1	chr17	-	1988	3	NNC	ENSMUSG00000073408.3	novel	2611	3	NA	NA	4785	-576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTACTCTCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	35949802	35947219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35947878_35948247_35949516_35949740
ES.15121.1	chr17	+	177	1	Intergenic	novelGene_12618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAATATGGTCG	NA	False	NA	NA	False	NA	NA	NA	35959628	35959805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_35959600_35959800
ES.15122.1	chr17	-	4448	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	-22	-1	-22	1	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGTCTCGTGAAGCGTT	1739	False	NA	NA	False	AATAAA	-38	NA	35978506	35966524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.11	chr17	-	4545	27	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_14	45.979365709043	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTTAGCATTGAAAGAAA	1797	False	NA	NA	False	AATAAA	-17	NA	35978448	35966545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.13	chr17	-	4619	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_15	57.122302789668	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGTTAGCATTGAAAGAA	1798	False	NA	NA	False	AATAAA	-16	NA	35978447	35966546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957
ES.15122.14	chr17	-	4414	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.8890564540731	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGTTAGCATTGAAAGAA	1778	False	NA	NA	False	AATAAA	-16	NA	35978467	35966546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977675_35977735_35977818_35977964
ES.15122.15	chr17	-	5032	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	171	junction_21	22.4461556614502	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGTTAGCATTGAAAG	1753	False	NA	NA	False	AATAAA	-14	NA	35978492	35966548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.17	chr17	-	4079	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	336	intron_retention	FALSE	canonical	0	0	junction_14	57.1841297158401	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCATGTGTCTGCACTC	1779	False	NA	NA	False	NA	NA	NA	35978466	35966945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957
ES.15122.18	chr17	-	3922	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	12	491	12	265	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTCCTTTCAGCCTT	1773	False	NA	NA	False	NA	NA	NA	35978472	35967016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.19	chr17	-	3827	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	0	598	0	158	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCAGGCTGCAGCGC	1761	False	NA	NA	False	NA	NA	NA	35978484	35967123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.2	chr17	-	4472	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_14	45.2323979208877	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTCTCGTGAAGCGT	1799	False	NA	NA	False	AATAAA	-37	NA	35978446	35966525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.20	chr17	-	3700	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	-25	750	-25	6	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGAGCCTTTACTG	1736	False	NA	-2	True	GATAAA	-19	NA	35978509	35967275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.23	chr17	-	3418	20	NIC	ENSMUSG00000038838.16	novel	3803	25	NA	NA	-1081	4	intron_retention	FALSE	canonical	3	177	junction_17	20.6143859619261	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAAGTGTGAGCCTTTAC	4788	False	NA	-4	True	GATAAA	-17	NA	35975457	35967277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387
ES.15122.25	chr17	-	3746	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	4	intron_retention	FALSE	canonical	0	0	junction_15	45.1265557700263	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAAGTGTGAGCCTTTAC	1779	False	NA	-4	True	GATAAA	-17	NA	35978466	35967277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.26	chr17	-	3380	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	216	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	67.8411259292396	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAAGTGTGAGCCTTTAC	2029	False	NA	-4	True	GATAAA	-17	NA	35978216	35967277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970799_35970906_35971020_35971119_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.27	chr17	-	3823	27	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	4	intron_retention	FALSE	canonical	0	0	junction_13	44.8727325909345	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAAGTGTGAGCCTTTAC	1779	False	NA	-4	True	GATAAA	-17	NA	35978466	35967277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.28	chr17	-	3857	27	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	20	2	intron_retention	FALSE	canonical	0	0	junction_15	59.8505040934217	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	1781	False	NA	-6	True	GATAAA	-15	NA	35978464	35967279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972768_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.29	chr17	-	3656	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.821991085237	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	1740	False	NA	-6	True	GATAAA	-15	NA	35978505	35967279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973087_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.3	chr17	-	4403	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	56.2303480410385	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTCTCGTGAAGCGT	1761	False	NA	NA	False	AATAAA	-37	NA	35978484	35966525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971670_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.30	chr17	-	3548	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.821991085237	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	1797	False	NA	-6	True	GATAAA	-15	NA	35978448	35967279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973036_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.31	chr17	-	3738	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	2	intron_retention	FALSE	canonical	0	0	junction_14	45.2323979208877	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	1779	False	NA	-6	True	GATAAA	-15	NA	35978466	35967279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.32	chr17	-	3571	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.2409871704262	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCAAGTGTGAGCCTTT	1806	False	NA	-6	True	GATAAA	-15	NA	35978439	35967279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970017_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.33	chr17	-	3880	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_15	57.122302789668	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGCAAGTGTGAGCCTT	1803	False	NA	-7	True	GATAAA	-14	NA	35978442	35967280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957
ES.15122.34	chr17	-	3481	30	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.9897958706776	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1797	False	NA	-8	True	GATAAA	-13	NA	35978448	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975518_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957_35978095_35978263
ES.15122.39	chr17	-	3342	27	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-374	0	intron_retention	FALSE	non_canonical	0	0	junction_6	59.3180301276505	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	2246	False	NA	-8	True	GATAAA	-13	NA	35977999	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968211_35969023_35969231_35969918_35970072_35970153_35970283_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.4	chr17	-	4276	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	58.9688718423957	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTCTCGTGAAGCGT	1782	False	NA	NA	False	AATAAA	-37	NA	35978463	35966525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.40	chr17	-	4526	27	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_13	45.9998070487335	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1802	False	NA	-8	True	GATAAA	-13	NA	35978443	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35969231_35969918_35970072_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.41	chr17	-	3620	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	57.7484318189769	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1803	False	NA	-8	True	GATAAA	-13	NA	35978442	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971685_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.42	chr17	-	3626	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.696558451461	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1797	False	NA	-8	True	GATAAA	-13	NA	35978448	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977553_35977648_35977735_35977818_35977964
ES.15122.43	chr17	-	3182	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-400	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	56.5338416800242	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	2220	False	NA	-8	True	GATAAA	-13	NA	35978025	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973095_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.44	chr17	-	3636	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	65.2325119265302	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1779	False	NA	-8	True	GATAAA	-13	NA	35978466	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971670_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957
ES.15122.45	chr17	-	3199	28	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-359	0	intron_retention	FALSE	canonical	0	0	junction_14	58.2483213579163	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	2261	False	NA	-8	True	GATAAA	-13	NA	35977984	35967281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970017_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.48	chr17	-	3619	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.7940021427264	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCACGCAAGTGTGAGCC	1797	False	NA	-9	True	GATAAA	-12	NA	35978448	35967282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975495_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.5	chr17	-	3178	26	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1920131976889	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACATGGGGTCTCGT	1772	False	NA	NA	False	AATAAA	-30	NA	35978473	35966532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35966809_35969105_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15122.6	chr17	-	2728	15	NNC	ENSMUSG00000038838.16	novel	3803	25	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_14	79.2924064099818	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACATGGGGTCTCGT	7701	False	NA	NA	False	AATAAA	-30	NA	35972544	35966532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970017_35970153_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466
ES.15122.7	chr17	-	4488	28	NIC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	-7	intron_retention	FALSE	canonical	0	0	junction_14	56.7174306630254	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACATGGGGTCTCGT	1779	False	NA	NA	False	AATAAA	-30	NA	35978466	35966532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35967545_35967627_35967751_35967841_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977957
ES.15122.8	chr17	-	4443	29	NNC	ENSMUSG00000038838.16	novel	4425	29	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	66.6631323467906	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAACATGGGGTCTC	1779	False	NA	NA	False	AATAAA	-28	NA	35978466	35966534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971670_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35974054_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ES.15123.1	chr17	-	3583	6	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	169	junction_5	10.9288608738514	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGCGGCTTCAGACGTC	NA	False	NA	-3	True	AATAAA	-15	NA	35984467	35978623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35979550_35980200_35980332_35980520_35981151_35981256_35982990_35983577_35983721_35984447
ES.15123.11	chr17	-	3323	6	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_2	71.7456618897617	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAATCTACGCGGCTT	NA	False	NA	-11	True	AATAAA	-7	NA	35984606	35978631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35979399_35979501_35979550_35980520_35981855_35982117_35982990_35983577_35983721_35984447
ES.15123.12	chr17	-	1938	12	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	142	junction_6	15.7873262277527	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAATCTACGCGGCTT	NA	False	NA	-11	True	AATAAA	-7	NA	35984636	35978631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.13	chr17	-	2237	10	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	169	junction_9	10.8945563482269	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAATCTACGCGGCTT	NA	False	NA	-11	True	AATAAA	-7	NA	35984607	35978631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980924_35981081_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.2	chr17	-	1689	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	-18	8	-18	0	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTACGCGGCTTCA	NA	False	NA	-9	True	AATAAA	-9	NA	35984649	35978629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.3	chr17	-	1983	12	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-11	0	intron_retention	FALSE	canonical	3	150	junction_7	13.7384060812342	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984606	35978630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35981151_35981256_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.4	chr17	-	2129	11	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	169	junction_10	11.8844436133965	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984604	35978630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980924_35981081_35981151_35981256_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.6	chr17	-	1667	14	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_13	48.8663192778351	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984598	35978630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984417
ES.15123.8	chr17	-	1990	12	NIC	ENSMUSG00000001524.15	novel	1679	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	142	junction_6	16.8056464340446	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984607	35978630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ES.15123.9	chr17	-	1680	14	FSM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	-109	-2	12	0	multi-exon	FALSE	canonical	2	3	junction_13	50.3611806921766	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTACGCGGCTTC	NA	False	NA	-10	True	AATAAA	-8	NA	35984619	35978630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984425
ES.15124.1	chr17	-	3647	17	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	11.1186779789685	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	9058	False	NA	1	True	AATAAA	-35	NA	36011491	35992458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
ES.15124.11	chr17	-	4078	18	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	-211	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	11.600620434428	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGTTTTTCCACAG	6520	False	NA	-18	True	AATAAA	-16	NA	36009074	35992477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36008566
ES.15124.12	chr17	-	3510	17	NIC	ENSMUSG00000003534.18	novel	3627	18	NA	NA	-11	-19	combination_of_known_junctions	TRUE	canonical	0	0	junction_16	12.2805740908151	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTTGTTTTTCCA	7600	False	NA	-21	True	AATAAA	-13	NA	36012949	35992480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012895
ES.15124.2	chr17	-	2546	12	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8979	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.6400334191011	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGGTGTATTTCCTG	6755	False	NA	0	True	AATAAA	-34	NA	35999884	35992459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997009_35997084_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999853
ES.15124.3	chr17	-	3794	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	-26	1	-26	-1	multi-exon	FALSE	canonical	3	11	junction_16	10.4162502800285	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGGTGTATTTCCTG	9021	False	NA	0	True	AATAAA	-34	NA	36011528	35992459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
ES.15124.5	chr17	-	2477	11	NNC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	8966	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	10.9949988631195	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGGTGTATTTCCTG	6742	False	NA	0	True	AATAAA	-34	NA	35999897	35992459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_35999861
ES.15124.6	chr17	-	3651	17	NIC	ENSMUSG00000003534.18	novel	3593	17	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	12.2805740908151	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGGTGTATTTCCTG	7661	False	NA	0	True	AATAAA	-34	NA	36012888	35992459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36012714
ES.15124.8	chr17	-	2479	9	NNC	ENSMUSG00000003534.18	novel	3593	17	NA	NA	8954	0	intron_retention	FALSE	canonical	3	12	junction_6	11.2520831404678	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGGTGTATTTCC	6730	False	NA	-2	True	AATAAA	-32	NA	35999909	35992461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999762_35999853
ES.15125.1	chr17	+	202	1	Intergenic	novelGene_12619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAAAGGGGGGGGGGGG	NA	False	NA	NA	False	CATAAA	-6	NA	36016345	36016547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36016300_36016500
ES.15126.1	chr17	-	125	1	Intergenic	novelGene_12620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAATAAATAAATAAATAAA	7342	False	NA	NA	False	NA	NA	NA	36025370	36025245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36025200_36025400
ES.15127.1	chr17	+	173	1	Intergenic	novelGene_12621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAGTTGTTTA	5792	False	NA	NA	False	NA	NA	NA	36029655	36029828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36029700_36029800
ES.15128.1	chr17	-	165	1	ISM	ENSMUSG00000092600.2	ENSMUST00000174630.2	492	2	20693	11	20693	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACCCAATGTATTCTC	4064	False	NA	NA	False	NA	NA	NA	36054390	36054225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36054200_36054400
ES.15129.1	chr17	-	175	1	Intergenic	novelGene_12622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGGTGTGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	36092311	36092136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36092100_36092300
ES.1513.1	chr1	+	9920	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	-53	0	-50	0	multi-exon	TRUE	canonical	3	70	junction_14	22.9621266275417	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGTGTGTGGTTT	NA	False	NA	15	True	NA	NA	NA	139382459	139421829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.12	chr1	+	5929	17	NNC	ENSMUSG00000033952.15	novel	6072	27	NA	NA	89	2338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	22.4457679752777	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACACAGTTCTGTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	139382645	139404410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139402279
ES.1513.13	chr1	+	11460	28	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	319	-207	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	29.3510047780563	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAAAACTGTTTAATGAA	NA	False	NA	10	True	AATAAA	-18	NA	139382875	139421619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139402279_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.14	chr1	+	8450	21	ISM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	11810	202	11766	-199	3prime_fragment	FALSE	canonical	3	70	junction_7	25.1195143265152	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTAATGAATTCATTTT	NA	False	NA	18	True	AATAAA	-26	NA	139394322	139421627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.15	chr1	+	7055	19	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-14192	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.6114144552863	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTGTGTGTGTGTGT	NA	False	NA	10	True	NA	NA	NA	139397071	139421824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139397250_139398175_139398334_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.18	chr1	+	5901	10	NIC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-5233	-1	intron_retention	FALSE	canonical	3	111	junction_1	15.3172218091473	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTGTGTGTGGTT	NA	False	NA	14	True	NA	NA	NA	139406030	139421828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.19	chr1	+	3877	11	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-4536	-205	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	38.6243446546346	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAACTGTTTAATGAATT	NA	False	NA	12	True	AATAAA	-20	NA	139406727	139421621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420603_139421385
ES.1513.2	chr1	+	9709	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	-32	190	-29	-187	multi-exon	FALSE	canonical	3	70	junction_14	22.9621266275417	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTTTACTATTTTTGA	NA	False	NA	30	True	AATAAA	-38	NA	139382480	139421639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.20	chr1	+	3988	11	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-4443	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3719711882332	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCACTTGTGTG	NA	False	NA	3	True	NA	NA	NA	139406820	139421817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139408875_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.21	chr1	+	2987	11	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-3438	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	38.6243446546346	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGTGTGTGGTTT	NA	False	NA	15	True	NA	NA	NA	139407825	139421829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420603_139421385
ES.1513.22	chr1	+	3739	10	NIC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-3266	-193	intron_retention	FALSE	canonical	3	111	junction_1	15.3172218091473	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTCATTTTTACTAT	NA	False	NA	24	True	AATAAA	-32	NA	139407997	139421633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.23	chr1	+	4051	9	NIC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-2412	-1	intron_retention	FALSE	canonical	3	111	junction_1	15.0644448951828	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTGTGTGTGGTT	NA	False	NA	14	True	NA	NA	NA	139408851	139421828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139408879_139410075_139410243_139413437_139413526_139414944_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.24	chr1	+	6474	7	NNC	ENSMUSG00000033952.15	novel	375	3	NA	NA	92	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	52.9803422664168	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTGTGTGTGGTT	NA	False	NA	14	True	NA	NA	NA	139411355	139421828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139413263_139413317_139415155_139416125_139417576_139417701_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.25	chr1	+	3278	5	NIC	ENSMUSG00000033952.15	novel	6072	27	NA	NA	4312	0	intron_retention	FALSE	canonical	3	129	junction_3	9.5524865872714	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGTGTGTGTGTGG	NA	False	NA	12	True	NA	NA	NA	139415575	139421826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139417576_139417701_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.3	chr1	+	2374	3	ISM	ENSMUSG00000033952.15	ENSMUST00000199998.2	3982	15	-19	15519	-18	1681	5prime_fragment	FALSE	canonical	3	84	junction_1	3.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	139382491	139386553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139382943_139384477_139384622_139384774
ES.1513.4	chr1	+	9646	27	NIC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	-7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	30.4349145500466	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTCACTTGTGTGTGT	NA	False	NA	6	True	NA	NA	NA	139382502	139421820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.6	chr1	+	9657	28	NNC	ENSMUSG00000033952.15	novel	9867	28	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	29.877940993728	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGTGTGTGTGTGTGGT	NA	False	NA	13	True	NA	NA	NA	139382513	139421827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408672_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ES.1513.9	chr1	+	3414	14	ISM	ENSMUSG00000033952.15	ENSMUST00000200083.5	6072	27	105	20486	58	-732	5prime_fragment	FALSE	canonical	3	84	junction_1	6.55608484697308	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGCTATGTGCCTTTCG	NA	False	NA	NA	False	NA	NA	NA	139382614	139401340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275
ES.15130.1	chr17	-	177	1	Intergenic	novelGene_12623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36096586	36096409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36096400_36096600
ES.15131.1	chr17	+	176	1	Intergenic	novelGene_12624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36108473	36108649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36108500_36108600
ES.15132.1	chr17	+	1166	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	-43	8	-43	-8	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCAGTTCTCGAAGTG	NA	False	NA	8	True	AATAAA	-21	NA	36132532	36133807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36132821_36132929
ES.15133.1	chr17	+	2025	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	-125	-75	-125	75	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACCAGTTTGCAGCA	NA	False	NA	100	True	AATAAA	-18	NA	36133996	36143758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.10	chr17	+	1642	13	NIC	ENSMUSG00000059714.14	novel	651	8	NA	NA	-15	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.6198986939131	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCCTCACTCAGA	NA	False	NA	29	True	ATTAAA	-27	NA	36134402	36143687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36134488_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.11	chr17	+	1646	13	NNC	ENSMUSG00000059714.14	novel	697	8	NA	NA	-14	-12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	54.3498824490193	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGGTTATCTATACT	NA	False	NA	13	True	ATTAAA	-11	NA	36134403	36143671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36134509_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.12	chr17	+	1508	12	NIC	ENSMUSG00000059714.14	novel	651	8	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	75.1173187104541	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTATACTTCTTTCCT	NA	False	NA	21	True	ATTAAA	-19	NA	36134408	36143679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36134488_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.2	chr17	+	1829	12	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	106	1289	-11	32	5prime_fragment	FALSE	canonical	3	176	junction_8	12.1464887964648	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGTTTCCTCGTCTTAA	NA	False	NA	NA	False	AGTAAA	-27	NA	36134227	36142394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834
ES.15133.4	chr17	+	1664	13	NNC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	50.3627811208061	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTATACTTCTTTCCT	NA	False	NA	21	True	ATTAAA	-19	NA	36134230	36143679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135214_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.5	chr17	+	1614	12	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	49.9444319318153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTATACTTCTTTCCT	NA	False	NA	21	True	ATTAAA	-19	NA	36134237	36143679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.6	chr17	+	2073	11	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	-14	-12	intron_retention	FALSE	canonical	3	27	junction_3	50.9961763272503	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGGTTATCTATACT	NA	False	NA	13	True	ATTAAA	-11	NA	36134259	36143671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141684_36141834_36142000_36143398
ES.15133.8	chr17	+	2666	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	145	-986	-7	986	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGCATCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	36134266	36144669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15133.9	chr17	+	1851	12	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	278	1	-18	-1	3prime_fragment	FALSE	canonical	3	176	junction_7	12.1464887964648	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATACTTCTTTCCTCAC	NA	False	NA	24	True	ATTAAA	-22	NA	36134399	36143682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ES.15134.1	chr17	-	4359	1	Antisense	novelGene_ENSMUSG00000059714.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGAATCTGAGCTGGCT	2192	False	NA	NA	False	NA	NA	NA	36143755	36139396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_36139400_36143800
ES.15134.13	chr17	-	4307	1	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3874	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTGTGAGGCTGTG	NA	False	NA	-12	True	AATAAA	-11	NA	36149124	36144817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36144800_36149100
ES.15134.14	chr17	-	2057	5	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-36	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4037.90436829551	3874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTGTGAGGCTGTG	NA	False	NA	-12	True	AATAAA	-11	NA	36149145	36144817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36144841_36145374_36146932_36147054_36147166_36147519_36147629_36148888
ES.15134.17	chr17	-	1952	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	56	641	-33	-641	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	3846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTGACTGTCCAGTTA	NA	False	NA	-3	True	TTTAAA	-3	NA	36149142	36145453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ES.15134.18	chr17	-	1810	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	765	-15	-765	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	3840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTCTGTATATATAGC	NA	False	NA	87	True	NA	NA	NA	36149124	36145577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ES.15134.19	chr17	-	2189	5	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-3037	816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4037.90436829551	3837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTCTGACAAACTTAGAT	NA	False	NA	-16	True	NA	NA	NA	36152235	36145680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888_36149346_36151974
ES.15134.2	chr17	-	1871	5	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	5416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4037.90436829551	3875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGAATCTGAGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	36149124	36139396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36139462_36145581_36146932_36147054_36147166_36147519_36147629_36148888
ES.15134.21	chr17	-	2060	3	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-26	804	intron_retention	FALSE	canonical	3	8733	junction_1	720	3836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTCTTTCCACTCTG	NA	False	NA	-28	True	NA	NA	NA	36149135	36145692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36146932_36147054_36147629_36148888
ES.15134.22	chr17	-	1679	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4494.79721455818	3836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTTTCTCTTTCCA	NA	False	NA	-33	True	NA	NA	NA	36149124	36145697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147166_36147530_36147629_36148888
ES.15134.24	chr17	-	2997	3	FSM	ENSMUSG00000001525.11	ENSMUST00000173253.2	979	3	-1220	-798	26	798	multi-exon	FALSE	canonical	3	8733	junction_1	24	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149172	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36146932_36147054_36147166_36147519
ES.15134.25	chr17	-	1680	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4128.13589892581	3834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149124	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147166_36147519_36147620_36148888
ES.15134.26	chr17	-	1688	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4116.77568006808	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149124	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147166_36147357_36147466_36148888
ES.15134.27	chr17	-	3303	2	ISM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	74	886	-15	798	intron_retention	FALSE	canonical	3	8733	junction_1	0	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149124	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36146932_36147054
ES.15134.29	chr17	-	1701	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-33	798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4494.79721455818	3834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149142	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147160_36147519_36147629_36148888
ES.15134.3	chr17	-	2653	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	0	-4	0	4	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	3874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGTGTGCTCATTC	NA	False	NA	-3	True	AATAAA	-20	NA	36149198	36144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ES.15134.30	chr17	-	1460	3	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5086.5	3834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149124	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146868_36147573_36147629_36148888
ES.15134.32	chr17	-	1679	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-11	798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4503.49930609521	3834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTCCTTTCTCTTTCC	NA	False	NA	-34	True	NA	NA	NA	36149120	36145698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147060_36147166_36147519_36147629_36148888
ES.15134.33	chr17	-	1666	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4503.49930609521	3834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTCTCCTTTCTCTTTC	NA	False	NA	-35	True	NA	NA	NA	36149124	36145699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146927_36147071_36147166_36147519_36147629_36148888
ES.15134.34	chr17	-	983	3	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5086.5	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTCTCCTTTCTCTT	NA	False	NA	-37	True	NA	NA	NA	36149124	36145701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146336_36147515_36147629_36148888
ES.15134.35	chr17	-	3423	1	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	795	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3834	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTCTCCTTTCTCTT	NA	False	NA	-37	True	NA	NA	NA	36149124	36145701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36145700_36149100
ES.15134.37	chr17	-	822	1	Intergenic	novelGene_12625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAAATGTTCTTTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	36152237	36151415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36151400_36152200
ES.15134.4	chr17	-	1161	2	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	1474	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGCTGTGTGCTCATT	NA	False	NA	-4	True	AATAAA	-19	NA	36146478	36144809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36145515_36146022
ES.15134.5	chr17	-	2584	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	4495.08197923019	3874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGAGGCTGTGTGCTC	NA	False	NA	-7	True	AATAAA	-16	NA	36149124	36144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147045_36147166_36147519_36147629_36148888
ES.15134.6	chr17	-	2409	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	2	417	junction_3	3931.56253924569	3872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGAGGCTGTGTGCTC	NA	False	NA	-7	True	AATAAA	-16	NA	36148042	36144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147166_36147519_36147629_36147972
ES.15134.7	chr17	-	2995	3	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	8	0	intron_retention	FALSE	canonical	3	8733	junction_1	720	3874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGAGGCTGTGTGCTC	NA	False	NA	-7	True	AATAAA	-16	NA	36149190	36144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36146932_36147054_36147629_36148888
ES.15134.8	chr17	-	2560	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4494.79721455818	3874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTGTGAGGCTGTG	NA	False	NA	-12	True	AATAAA	-11	NA	36149124	36144817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146932_36147054_36147156_36147519_36147629_36148888
ES.15134.9	chr17	-	1971	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4503.49930609521	3874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTGTGAGGCTGTG	NA	False	NA	-12	True	AATAAA	-11	NA	36149124	36144817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36146333_36147054_36147166_36147519_36147629_36148888
ES.15135.1	chr17	+	4112	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.4336540379578	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9213	False	NA	14	True	NA	NA	NA	36152390	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164134_36169821
ES.15135.10	chr17	+	5800	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	50.2400098900269	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9356	False	NA	14	True	NA	NA	NA	36152533	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168919_36169830
ES.15135.100	chr17	+	1896	4	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2213	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	81.2294418435965	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36161605	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36161898_36162004_36162049_36163306_36164128_36169822
ES.15135.101	chr17	+	4326	9	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2349	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	57.9433991063693	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36161741	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169502_36169795
ES.15135.102	chr17	+	1812	3	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2411	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	99	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTCCTGCAGTGA	NA	False	NA	11	True	NA	NA	NA	36161803	36170558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36162049_36163306_36164115_36169799
ES.15135.103	chr17	+	4503	6	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2537	0	intron_retention	FALSE	non_canonical	0	0	junction_5	70.1837588050113	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36161929	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36162049_36163306_36164781_36164912_36165874_36165991_36166103_36168354_36169466_36169835
ES.15135.104	chr17	+	4106	6	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	4216	0	intron_retention	FALSE	canonical	3	142	junction_2	9.92773891679269	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36163608	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36164781_36164912_36165005_36165094_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.105	chr17	+	3528	8	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	4285	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.3081189431959	404	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATTTTCCTGCAGTG	NA	False	NA	10	True	NA	NA	NA	36163677	36170557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169421_36169830
ES.15135.106	chr17	+	3129	8	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	4596	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.3081189431959	404	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36163988	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169318_36169818
ES.15135.107	chr17	+	3069	8	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	4728	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.3081189431959	404	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	NA	False	NA	12	True	NA	NA	NA	36164120	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169439_36169866
ES.15135.108	chr17	+	2974	8	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	4824	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	58.3081189431959	404	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36164216	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169367_36169795
ES.15135.109	chr17	+	2235	6	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	5700	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.5460429200694	403	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36165092	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169311_36169824
ES.15135.11	chr17	+	6713	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_8	39.0654152245521	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTGCAGTGAATTAT	9357	False	NA	16	True	NA	NA	NA	36152534	36170563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.110	chr17	+	2307	6	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	5788	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.5460429200694	403	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36165180	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169477_36169830
ES.15135.111	chr17	+	2599	2	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	6318	-1	intron_retention	FALSE	canonical	3	162	junction_1	0	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36165710	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36166103_36168354
ES.15135.112	chr17	+	921	2	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	9026	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	798	False	NA	14	True	NA	NA	NA	36168418	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36168617_36169838
ES.15135.113	chr17	+	1107	2	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	9609	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	395	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	1381	False	NA	13	True	NA	NA	NA	36169001	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36169374_36169825
ES.15135.12	chr17	+	3661	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	52.9377936827745	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9357	False	NA	14	True	NA	NA	NA	36152534	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36163839_36169830
ES.15135.13	chr17	+	946	3	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.5	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9358	False	NA	14	True	NA	NA	NA	36152535	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36169790
ES.15135.14	chr17	+	6835	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.7919107385929	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9358	False	NA	14	True	NA	NA	NA	36152535	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169459_36169828
ES.15135.15	chr17	+	4906	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9358	False	NA	14	True	NA	NA	NA	36152535	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164582_36169819
ES.15135.16	chr17	+	4440	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTCCTGCAGTGA	9358	False	NA	11	True	NA	NA	NA	36152535	36170558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164128_36169828
ES.15135.18	chr17	+	4456	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9359	False	NA	15	True	NA	NA	NA	36152536	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164136_36169823
ES.15135.19	chr17	+	6395	14	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	51.204659551288	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	9359	False	NA	12	True	NA	NA	NA	36152536	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.20	chr17	+	6701	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.8624676963559	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	9359	False	NA	12	True	NA	NA	NA	36152536	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161192_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.21	chr17	+	6965	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	46.9079476800633	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9359	False	NA	15	True	NA	NA	NA	36152536	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156967_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.22	chr17	+	7660	13	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	53	junction_5	39.2130930515136	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9359	False	NA	13	True	NA	NA	NA	36152536	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36162049_36163306_36164781_36164912_36165005_36165094_36165874_36165991_36166103_36168354
ES.15135.23	chr17	+	3171	10	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	63.1783679184538	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9361	False	NA	13	True	NA	NA	NA	36152538	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36162004_36162049_36163306_36163563_36169820
ES.15135.24	chr17	+	4568	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9361	False	NA	15	True	NA	NA	NA	36152538	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164256_36169829
ES.15135.25	chr17	+	5447	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.3056202249487	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	9362	False	NA	12	True	NA	NA	NA	36152539	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36158301_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.26	chr17	+	5224	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	51.0923347153628	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTGCAGTGAATTAT	9362	False	NA	16	True	NA	NA	NA	36152539	36170563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166086_36169821
ES.15135.27	chr17	+	3130	10	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	2040	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	33.7704670451038	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCCTGCTGCCTCTA	9362	False	NA	NA	False	NA	NA	NA	36152539	36163551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306
ES.15135.29	chr17	+	4200	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9362	False	NA	15	True	NA	NA	NA	36152539	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36163889_36169829
ES.15135.3	chr17	+	7455	15	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-16	0	intron_retention	TRUE	canonical	3	75	junction_1	33.1699396737345	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9213	False	NA	15	True	NA	NA	NA	36152390	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.30	chr17	+	5715	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	47.3905757157124	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9362	False	NA	15	True	NA	NA	NA	36152539	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166086_36169821
ES.15135.31	chr17	+	4192	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9362	False	NA	15	True	NA	NA	NA	36152539	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36163872_36169820
ES.15135.33	chr17	+	4684	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-23	-2018	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_8	39.0654152245521	368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCATCGAACAGTCCT	9367	False	NA	NA	False	NA	NA	NA	36152544	36168544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.34	chr17	+	5184	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-23	-2010	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	32.7234879966465	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGAACAGTCCTAGAAAACA	9367	False	NA	NA	False	NA	NA	NA	36152544	36168552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.35	chr17	+	6725	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	46.5349331148117	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9368	False	NA	14	True	NA	NA	NA	36152545	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169362_36169828
ES.15135.37	chr17	+	6901	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.7919107385929	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9369	False	NA	15	True	NA	NA	NA	36152546	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169502_36169795
ES.15135.38	chr17	+	4654	13	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-20	3888	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	34.2863756549968	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGTTACTGATCGCATC	9370	False	NA	NA	False	AGTAAA	-12	NA	36152547	36165399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308
ES.15135.39	chr17	+	4440	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-19	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	52.904064116096	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9371	False	NA	14	True	NA	NA	NA	36152548	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164136_36169829
ES.15135.40	chr17	+	6328	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.0580092328199	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9371	False	NA	15	True	NA	NA	NA	36152548	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169466_36169838
ES.15135.41	chr17	+	4698	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	52.904064116096	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9371	False	NA	14	True	NA	NA	NA	36152548	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164377_36169812
ES.15135.42	chr17	+	4066	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9371	False	NA	13	True	NA	NA	NA	36152548	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36163765_36169828
ES.15135.43	chr17	+	897	3	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.5	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9372	False	NA	14	True	NA	NA	NA	36152549	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36169825
ES.15135.44	chr17	+	7317	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.5269852751795	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9372	False	NA	14	True	NA	NA	NA	36152549	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36157937_36158067_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.45	chr17	+	4275	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.703118614429	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9372	False	NA	13	True	NA	NA	NA	36152549	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36163923_36169776
ES.15135.46	chr17	+	6618	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	47.8713089670861	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9374	False	NA	14	True	NA	NA	NA	36152551	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161330_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.47	chr17	+	3808	8	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.2814875580313	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9375	False	NA	14	True	NA	NA	NA	36152552	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36160959_36169837
ES.15135.48	chr17	+	7270	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	38.3054391264043	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9377	False	NA	15	True	NA	NA	NA	36152554	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.49	chr17	+	6777	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	47.4339775079238	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTGCAGTGAATTAT	9382	False	NA	16	True	NA	NA	NA	36152559	36170563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.5	chr17	+	7224	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	32.7234879966465	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9337	False	NA	15	True	NA	NA	NA	36152514	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.50	chr17	+	6344	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.7302375286523	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9388	False	NA	13	True	NA	NA	NA	36152565	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162044_36163302_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168919_36169830
ES.15135.52	chr17	+	3473	9	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	68.1244266030915	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9389	False	NA	14	True	NA	NA	NA	36152566	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36162004_36162049_36163306_36163871_36169795
ES.15135.53	chr17	+	6335	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.9793707443381	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9390	False	NA	15	True	NA	NA	NA	36152567	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168898_36169819
ES.15135.54	chr17	+	3716	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	58.2395913447201	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9391	False	NA	14	True	NA	NA	NA	36152568	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36163839_36169830
ES.15135.56	chr17	+	3758	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	58.2395913447201	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9391	False	NA	13	True	NA	NA	NA	36152568	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36163872_36169820
ES.15135.57	chr17	+	7362	15	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	39	junction_1	39.162664435841	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9391	False	NA	14	True	NA	NA	NA	36152568	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.58	chr17	+	5244	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	1	-2012	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	38.3054391264043	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCGAACAGTCCTAGAAAA	9391	False	NA	NA	False	NA	NA	NA	36152568	36168550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.6	chr17	+	6333	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	46.5349331148117	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9337	False	NA	15	True	NA	NA	NA	36152514	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168930_36169820
ES.15135.60	chr17	+	6881	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	49.9793707443381	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9393	False	NA	15	True	NA	NA	NA	36152570	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169466_36169838
ES.15135.61	chr17	+	3548	11	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	60.3705226083061	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTTCCTGCAGTGA	9393	False	NA	11	True	NA	NA	NA	36152570	36170558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152771_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36163555_36169819
ES.15135.62	chr17	+	4657	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	3	-2018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.2801777751351	368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCATCGAACAGTCCT	9393	False	NA	NA	False	NA	NA	NA	36152570	36168544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36156895_36156981_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.63	chr17	+	4960	11	NNC	ENSMUSG00000061607.16	novel	649	4	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.2419772056424	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9394	False	NA	14	True	NA	NA	NA	36152571	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164583_36169819
ES.15135.64	chr17	+	7387	15	NIC	ENSMUSG00000061607.16	novel	649	4	NA	NA	4	-1	intron_retention	FALSE	canonical	3	39	junction_1	44.107012723926	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9394	False	NA	14	True	NA	NA	NA	36152571	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.65	chr17	+	6875	17	NNC	ENSMUSG00000061607.16	novel	649	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.9793707443381	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9396	False	NA	13	True	NA	NA	NA	36152573	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169459_36169832
ES.15135.66	chr17	+	7314	16	NNC	ENSMUSG00000061607.16	novel	649	4	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	47.9436706516674	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9447	False	NA	13	True	NA	NA	NA	36152624	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152771_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.67	chr17	+	7299	16	NNC	ENSMUSG00000061607.16	novel	649	4	NA	NA	205	-2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	45.3958392611286	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	9595	False	NA	13	True	NA	NA	NA	36152772	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152907_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.68	chr17	+	6373	17	NNC	ENSMUSG00000061607.16	novel	649	4	NA	NA	209	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	54.8963511993284	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	9599	False	NA	14	True	NA	NA	NA	36152776	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152907_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168873_36169795
ES.15135.69	chr17	+	6862	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	45.0007407346442	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36155322	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169491_36169795
ES.15135.7	chr17	+	6919	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	46.0057316401989	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9337	False	NA	15	True	NA	NA	NA	36152514	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169491_36169795
ES.15135.70	chr17	+	8925	13	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	-1	intron_retention	FALSE	canonical	0	0	junction_12	49.6468081104471	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36155322	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36159558_36159683_36159750_36159898_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169307_36169795
ES.15135.72	chr17	+	6800	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	49.3578317550068	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36155322	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169466_36169835
ES.15135.73	chr17	+	7166	15	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	-2	combination_of_known_junctions	FALSE	canonical	3	99	junction_4	28.5650885822937	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36155322	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.75	chr17	+	6804	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.5941516717514	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36155322	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169459_36169822
ES.15135.76	chr17	+	4606	10	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	50.5678861641567	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36155322	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164293_36169795
ES.15135.77	chr17	+	7275	14	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2755	0	intron_retention	FALSE	canonical	3	99	junction_4	28.4013917485471	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36155322	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.78	chr17	+	6585	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2823	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.5941516717514	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36155390	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169311_36169824
ES.15135.79	chr17	+	6515	16	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2854	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	49.3578317550068	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	NA	False	NA	12	True	NA	NA	NA	36155421	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169363_36169916
ES.15135.8	chr17	+	4384	10	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-53	3269	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	33.7704670451038	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAGTTACAACCACT	9337	False	NA	NA	False	NA	NA	NA	36152514	36164780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306
ES.15135.80	chr17	+	7032	14	ISM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	4322	1	-2664	-1	3prime_fragment	FALSE	canonical	3	53	junction_3	36.6497899119724	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36156728	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.82	chr17	+	4298	9	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-2389	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	51.7419981736307	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36157003	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164433_36169829
ES.15135.83	chr17	+	6345	14	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-2200	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	48.0006163668513	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36157192	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169495_36169795
ES.15135.84	chr17	+	6649	13	ISM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	4786	2	-2200	-2	3prime_fragment	FALSE	canonical	3	53	junction_2	37.5610613978537	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36157192	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.85	chr17	+	6573	12	ISM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	5806	3	-1180	-3	3prime_fragment	FALSE	canonical	3	53	junction_1	37.7418372763136	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	NA	False	NA	12	True	NA	NA	NA	36158212	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.87	chr17	+	3848	6	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-906	-1	intron_retention	FALSE	canonical	0	0	junction_5	65.3605385534728	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36158486	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159683_36159750_36159898_36159992_36161186_36162049_36163306_36164297_36169795
ES.15135.88	chr17	+	4803	13	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-884	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	49.7730264969558	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	NA	False	NA	12	True	NA	NA	NA	36158508	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168398_36169868
ES.15135.89	chr17	+	5896	13	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-864	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.022854443583	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36158528	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165227_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169466_36169838
ES.15135.9	chr17	+	6265	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	46.5349331148117	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9353	False	NA	15	True	NA	NA	NA	36152530	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36168888_36169830
ES.15135.90	chr17	+	5261	13	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-743	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	54.853593015104	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36158649	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159683_36159750_36159898_36159992_36161186_36161406_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169453_36169833
ES.15135.91	chr17	+	4325	12	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	-424	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.8997035725963	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36158968	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166079_36169824
ES.15135.93	chr17	+	2625	6	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	131	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	69.7722007679276	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36159523	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159680_36159750_36159898_36159992_36161186_36162049_36163306_36164134_36169821
ES.15135.94	chr17	+	4773	13	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	131	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.1855736233261	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTCCTGCAGTGAA	NA	False	NA	12	True	NA	NA	NA	36159523	36170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169307_36169795
ES.15135.95	chr17	+	5219	10	ISM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	7433	2	447	-2	3prime_fragment	FALSE	canonical	3	116	junction_2	25.9019995414816	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTCCTGCAGTGAAT	NA	False	NA	13	True	NA	NA	NA	36159839	36170560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.96	chr17	+	5270	9	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	504	-1	intron_retention	FALSE	canonical	3	122	junction_1	22.9074223779106	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCCTGCAGTGAATT	NA	False	NA	14	True	NA	NA	NA	36159896	36170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36159992_36161186_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ES.15135.97	chr17	+	4701	10	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	1792	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.4505674641727	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36161184	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169459_36169828
ES.15135.98	chr17	+	5001	7	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2212	0	intron_retention	FALSE	canonical	3	116	junction_1	25.31578339473	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	NA	False	NA	15	True	NA	NA	NA	36161604	36170562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165874_36165991_36166103_36168354
ES.15135.99	chr17	+	1329	4	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	2213	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	81.2294418435965	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTGCAGTGAATTAT	NA	False	NA	16	True	NA	NA	NA	36161605	36170563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36161898_36162004_36162049_36163306_36163563_36169826
ES.15136.1	chr17	-	173	1	Intergenic	novelGene_12626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGTAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	36154694	36154521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36154500_36154700
ES.15137.1	chr17	-	157	1	Intergenic	novelGene_12627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	6103	False	NA	NA	False	NA	NA	NA	36162436	36162279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36162300_36162400
ES.15138.1	chr17	-	1626	1	Intergenic	novelGene_12628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGGGACACGCAGTCC	423	False	NA	NA	False	NA	NA	NA	36168116	36166490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36166500_36168100
ES.15139.1	chr17	+	1707	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	-242	1	-242	-1	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTTGTCTGTCCATGA	4347	False	NA	23	True	AATAAA	-17	NA	36171967	36176293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ES.15139.2	chr17	+	3842	2	NIC	ENSMUSG00000059791.15	novel	302	3	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	267	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCACTTGTCTGTCCAT	4607	False	NA	21	True	AATAAA	-15	NA	36172227	36176291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36175181_36175402
ES.15139.3	chr17	+	1231	3	FSM	ENSMUSG00000059791.15	ENSMUST00000172931.2	302	3	-135	-794	13	-5	multi-exon	FALSE	canonical	1	2	junction_1	132.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCACTTGTCTGTCC	4622	False	NA	19	True	AATAAA	-13	NA	36172242	36176289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36172410_36175003_36175181_36175402
ES.15139.4	chr17	+	3198	2	NNC	ENSMUSG00000059791.15	novel	333	2	NA	NA	30	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCACTTGTCTGTCC	4639	False	NA	19	True	AATAAA	-13	NA	36172259	36176289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36172808_36173639
ES.1514.1	chr1	-	3473	14	Antisense	novelGene_ENSMUSG00000033952.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAAAGTAGCCCAGCCG	NA	False	NA	NA	False	AAAAAG	-14	NA	139401338	139382553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_139382941_139384475_139384619_139384772_139386182_139389162_139389267_139389507_139389651_139390786_139391039_139391972_139392040_139395653_139395797_139396354_139396485_139397071_139397250_139398175_139398321_139398408_139398493_139399305_139399529_139401273
ES.15140.1	chr17	+	3005	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	-262	0	169	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9065	False	NA	15	True	AATAAA	-22	NA	36176685	36186488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ES.15140.10	chr17	+	172	2	Antisense	novelGene_ENSMUSG00000024436.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	666	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAATAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36182686	36226157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36182844_36226142
ES.15140.102	chr17	+	6117	10	NIC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	-261	-597	intron_retention	FALSE	canonical	3	575	junction_1	37.7771241773525	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCTTCCCCAGGTGGC	NA	False	NA	21	True	AATAAA	-15	NA	36291018	36299757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36298536_36298616_36298780_36299004
ES.15140.103	chr17	+	6487	10	NIC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	-261	-41	intron_retention	FALSE	canonical	3	575	junction_1	41.6546649381688	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGCGGAGACTTAATTA	NA	False	NA	NA	False	AAAAAG	-28	NA	36291018	36300313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36298780_36299004_36299146_36299412
ES.15140.105	chr17	+	2060	11	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	567	590	30	-590	3prime_fragment	FALSE	canonical	3	585	junction_6	35.9699874895725	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGGTGGCCTGAGGT	NA	False	NA	28	True	AATAAA	-22	NA	36291309	36299764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.106	chr17	+	1888	10	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1011	597	474	-597	3prime_fragment	FALSE	canonical	3	585	junction_5	37.9046887877841	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCTTCCCCAGGTGGC	NA	False	NA	21	True	AATAAA	-15	NA	36291753	36299757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.107	chr17	+	1402	8	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1705	596	1168	-596	3prime_fragment	FALSE	canonical	3	585	junction_3	34.0797384295797	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCTTCCCCAGGTGGCC	NA	False	NA	22	True	AATAAA	-16	NA	36292447	36299758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.108	chr17	+	1072	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	46	-7	46	7	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTATTAGTCCACAGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	36305390	36349334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36305453_36348324
ES.15140.109	chr17	+	114	1	Intergenic	novelGene_12639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGATA	NA	False	NA	NA	False	AGTAAA	-5	NA	36310529	36310643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36310500_36310600
ES.15140.110	chr17	+	174	1	Antisense	novelGene_ENSMUSG00000053835.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	36317309	36317483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36317300_36317500
ES.15140.111	chr17	+	185	1	Intergenic	novelGene_12640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGCACATGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	36339250	36339435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36339200_36339400
ES.15140.112	chr17	+	178	1	Intergenic	novelGene_12641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	36347649	36347827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36347600_36347800
ES.15140.12	chr17	+	3477	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	-122	-4	-122	4	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATGTCATTGCTTAAAC	NA	False	NA	56	True	NA	NA	NA	36190588	36203566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.14	chr17	+	3376	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	389.703694528402	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190657	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196570_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.15	chr17	+	3439	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-46	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	390.084236942942	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTTACAAGTTAAATTA	NA	False	NA	79	True	NA	NA	NA	36190664	36203589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196890_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.17	chr17	+	3688	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-42	0	intron_retention	FALSE	canonical	3	278	junction_2	379.993165143211	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190668	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.18	chr17	+	3469	19	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-42	-2	intron_retention	FALSE	canonical	0	0	junction_12	384.868700554704	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCTGCCTTATGTCA	NA	False	NA	46	True	AATGAA	-36	NA	36190668	36203556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197139_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200493_36201806_36201981_36203310
ES.15140.19	chr17	+	3479	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-42	0	intron_retention	FALSE	canonical	3	278	junction_2	367.280933279441	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190668	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.2	chr17	+	3995	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	-810	0	180	0	multi-exon	FALSE	canonical	3	80	junction_1	4	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9076	False	NA	15	True	AATAAA	-22	NA	36176696	36186488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36179678_36184617_36184832_36185688
ES.15140.21	chr17	+	4289	17	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-40	4	intron_retention	FALSE	canonical	3	278	junction_2	329.599751355716	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	NA	False	NA	11	True	AATAAA	-18	NA	36190670	36203521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36199095_36199246_36200493_36201806_36201981_36203310
ES.15140.23	chr17	+	5367	17	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-35	2	intron_retention	FALSE	non_canonical	0	0	junction_15	353.04049320687	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	NA	False	NA	9	True	AATAAA	-16	NA	36190675	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196570_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36201177_36201586_36201981_36203310
ES.15140.24	chr17	+	3337	20	NNC	ENSMUSG00000024422.15	novel	3275	20	NA	NA	-35	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	422.751375824814	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAGTGACGTGAAAAC	NA	False	NA	33	True	AATAAA	-40	NA	36190675	36203543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195030_36196386_36196598_36196775_36196875_36196981_36197135_36198315_36198432_36198733_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.25	chr17	+	3710	18	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	278	junction_2	375.310372135551	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTGCATGGGAACTC	NA	False	NA	5	True	AATAAA	-12	NA	36190677	36203515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36199315_36200089_36200493_36201806_36201981_36203310
ES.15140.26	chr17	+	3332	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	118	junction_17	369.413340401348	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190678	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200381_36200493_36201806_36201981_36203310
ES.15140.3	chr17	+	2656	4	NNC	ENSMUSG00000034595.18	novel	3185	3	NA	NA	185	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.2626483512709	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGCTGCCTTCCTTT	9081	False	NA	10	True	AATAAA	-17	NA	36176701	36186483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36176793_36178121_36179678_36184617_36184832_36185688
ES.15140.30	chr17	+	3756	18	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-24	0	intron_retention	FALSE	canonical	3	278	junction_2	375.672803598187	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190686	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.32	chr17	+	3693	19	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-22	0	intron_retention	FALSE	canonical	3	30	junction_14	367.647664966821	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	NA	False	NA	48	True	AATGAA	-38	NA	36190688	36203558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199124_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.33	chr17	+	3191	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_18	345.14100267629	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCTGCCTTATGTCAT	NA	False	NA	47	True	AATGAA	-37	NA	36190691	36203557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36203310
ES.15140.38	chr17	+	4215	18	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	278	junction_2	343.942288149996	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCTGCCTTATGTCA	NA	False	NA	46	True	AATGAA	-36	NA	36190693	36203556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36200493_36201806_36201981_36203310
ES.15140.39	chr17	+	3633	19	NIC	ENSMUSG00000024422.15	novel	3275	20	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1	junction_12	398.91796551406	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	NA	False	NA	48	True	AATGAA	-38	NA	36190694	36203558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198315_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.4	chr17	+	3574	3	ISM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	25	1	25	1	intron_retention	FALSE	canonical	3	22	junction_1	29	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCTTCCTTTGTTT	9352	False	NA	14	True	AATAAA	-21	NA	36176972	36186487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36177121_36178121_36179678_36184617
ES.15140.40	chr17	+	3241	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_17	375.122982603789	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGCATGGGAACTCTG	NA	False	NA	7	True	AATAAA	-14	NA	36190694	36203517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200172_36200330_36200493_36201806_36201981_36203310
ES.15140.43	chr17	+	3877	17	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-16	4	intron_retention	FALSE	canonical	3	278	junction_2	382.307958326792	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	NA	False	NA	11	True	AATAAA	-18	NA	36190694	36203521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36199315_36200089_36200493_36201806_36201981_36203310
ES.15140.45	chr17	+	2401	11	ISM	ENSMUSG00000024422.15	ENSMUST00000174366.8	3275	20	-17	6209	-11	-2237	intron_retention	FALSE	canonical	3	278	junction_2	21.3550930693359	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGTGTATGCCAGGA	NA	False	NA	NA	False	AATAAA	-25	NA	36190699	36197308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775
ES.15140.46	chr17	+	4432	18	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-11	0	intron_retention	FALSE	canonical	3	278	junction_2	362.377911668264	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190699	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.48	chr17	+	3170	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	397.691424518813	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190699	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.49	chr17	+	3245	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	369.854339824451	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190699	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201923_36201981_36203310
ES.15140.5	chr17	+	2935	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	75	-267	75	267	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	9402	False	NA	NA	False	NA	NA	NA	36177022	36186755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ES.15140.50	chr17	+	3360	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	364.632627323156	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190699	36203562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199319_36200095_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.53	chr17	+	3791	17	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-9	2	intron_retention	FALSE	canonical	0	0	junction_11	386.834019436954	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	NA	False	NA	9	True	AATAAA	-16	NA	36190701	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196890_36196981_36197135_36198290_36199095_36199246_36199315_36200089_36200493_36201806_36201981_36203310
ES.15140.54	chr17	+	3293	20	FSM	ENSMUSG00000024422.15	ENSMUST00000174366.8	3275	20	-14	-4	-8	4	multi-exon	FALSE	canonical	1	1	junction_12	390.40186696343	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	NA	False	NA	11	True	AATAAA	-18	NA	36190702	36203521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198315_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.55	chr17	+	3342	20	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	388.944654929642	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	NA	False	NA	48	True	AATGAA	-38	NA	36190707	36203558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191003_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.56	chr17	+	3557	19	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	14	4	intron_retention	FALSE	canonical	1	6	junction_10	398.175282451781	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATGGGAACTCTGGAAC	NA	False	NA	11	True	AATAAA	-18	NA	36190730	36203521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196570_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.58	chr17	+	1869	12	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	1816	144283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.3108295716074	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGAATTTGGGGCTGGA	1087	False	NA	NA	False	NA	NA	NA	36192532	36347845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36347670
ES.15140.59	chr17	+	2327	15	ISM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	3023	4	3017	0	3prime_fragment	FALSE	canonical	3	306	junction_3	388.521346562443	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	2288	False	NA	48	True	AATGAA	-38	NA	36193733	36203558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.6	chr17	+	3051	3	NNC	ENSMUSG00000034595.18	novel	3131	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTTGCTGCCTTC	9902	False	NA	6	True	AATAAA	-13	NA	36177522	36186479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36179590_36184638_36184832_36185688
ES.15140.60	chr17	+	1186	6	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	96	-2	intron_retention	FALSE	canonical	0	0	junction_3	452.348715041836	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTGCATGGGAACTC	7221	False	NA	5	True	AATAAA	-12	NA	36198666	36203515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200095_36200493_36201806_36201981_36203310
ES.15140.61	chr17	+	3101	6	NNC	ENSMUSG00000024422.15	novel	825	5	NA	NA	-38	-11	intron_retention	FALSE	non_canonical	0	0	junction_4	554.954196308128	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGACGTGAAAACCTGC	7344	False	NA	37	True	AATAAA	-44	NA	36198789	36203547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36198890_36198975_36199095_36199246_36199315_36200089_36201175_36201577_36202938_36203178
ES.15140.62	chr17	+	1856	5	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-38	2	intron_retention	FALSE	canonical	3	1016	junction_2	68.8403951179829	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	7344	False	NA	9	True	AATAAA	-16	NA	36198789	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36199095_36199246_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.63	chr17	+	1068	4	NNC	ENSMUSG00000024422.15	novel	462	4	NA	NA	5	2	intron_retention	FALSE	non_canonical	0	0	junction_2	565.685424949238	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	7393	False	NA	9	True	AATAAA	-16	NA	36198838	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36199095_36199246_36199613_36200576_36200958_36203454
ES.15140.64	chr17	+	1117	6	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	25	0	intron_retention	FALSE	canonical	3	1011	junction_1	67.15057706379	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCCTTATGTCATT	7413	False	NA	48	True	AATGAA	-38	NA	36198858	36203558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36198890_36198975_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.65	chr17	+	988	6	NNC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	-41	2	intron_retention	FALSE	canonical	0	0	junction_2	452.607733031595	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	7431	False	NA	9	True	AATAAA	-16	NA	36198876	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36199095_36199246_36199315_36200095_36200253_36200330_36200493_36201806_36201981_36203310
ES.15140.66	chr17	+	1347	3	NNC	ENSMUSG00000024422.15	novel	491	2	NA	NA	264	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCATGGGAACTCTGGA	8991	False	NA	9	True	AATAAA	-16	NA	36200436	36203519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36201178_36201583_36201981_36203310
ES.15140.67	chr17	+	251	1	Intergenic	novelGene_12632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGATGGTTGACCCTGTT	NA	False	NA	NA	False	AATAAA	-43	NA	36209700	36209951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36209700_36210000
ES.15140.68	chr17	+	4406	20	FSM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	-150	-1	-18	1	multi-exon	FALSE	canonical	3	16	junction_1	32.7700795901305	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTATGTTTCACTTCT	NA	False	NA	29	True	AATAAA	-29	NA	36227307	36243176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36227491_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.69	chr17	+	4293	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.0223845458022	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCTGGTATGTTTCAC	NA	False	NA	25	True	AATAAA	-25	NA	36227589	36243172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227664_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.7	chr17	+	1052	3	NNC	ENSMUSG00000034595.18	novel	3524	3	NA	NA	655	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	NA	False	NA	13	True	AATAAA	-20	NA	36179949	36186486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36179990_36184617_36184832_36185688
ES.15140.70	chr17	+	4472	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	28	True	AATAAA	-28	NA	36227647	36243175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.71	chr17	+	4743	20	NNC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	35.9993844207142	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36227874	36243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36227898_36228089_36229109_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.72	chr17	+	2382	5	NIC	ENSMUSG00000039220.17	novel	807	5	NA	NA	-14	1585	intron_retention	FALSE	canonical	3	113	junction_1	19.2937813815747	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTAAGCATTAAATGGA	NA	False	NA	NA	False	NA	NA	NA	36227875	36236772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136
ES.15140.73	chr17	+	4201	20	NNC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-13	-22	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	35.5253411172341	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGAGAAGCAGCTCAT	NA	False	NA	4	True	AATAAA	-4	NA	36227876	36243151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240960_36241057_36241183_36241784_36242040
ES.15140.76	chr17	+	4179	20	NNC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.5396608413985	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36227877	36243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239134_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.77	chr17	+	4311	19	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	-19	intron_retention	FALSE	canonical	3	113	junction_1	16.1554944214035	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGCAGCTCATTTA	NA	False	NA	7	True	AATAAA	-7	NA	36227877	36243154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.78	chr17	+	4442	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	200	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	16.24875874228	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATGATCTGAGTTACA	NA	False	NA	NA	False	NA	NA	NA	36227877	36243375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.8	chr17	+	1050	3	NNC	ENSMUSG00000034595.18	novel	2536	4	NA	NA	1988	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTTGCTGCCTTC	NA	False	NA	6	True	AATAAA	-13	NA	36181282	36186479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36181334_36184623_36184832_36185688
ES.15140.80	chr17	+	4383	21	NNC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.5291306602649	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36227877	36243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36227898_36228089_36228609_36230526_36230670_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.81	chr17	+	4258	20	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-12	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	36.1734050851874	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAACCCCTGGTATGT	NA	False	NA	20	True	AATAAA	-20	NA	36227877	36243167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234904_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.82	chr17	+	4530	18	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	113	junction_1	17.0910446207473	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAACCCCTGGTATGTTT	NA	False	NA	22	True	AATAAA	-22	NA	36227881	36243169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36241057_36241183_36241784_36242040
ES.15140.83	chr17	+	4223	19	FSM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	0	-1	0	1	multi-exon	FALSE	canonical	3	118	junction_1	14.6080478411181	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGGTATGTTTCACTT	NA	False	NA	27	True	AATAAA	-27	NA	36228087	36243174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ES.15140.86	chr17	+	2558	6	NIC	ENSMUSG00000039220.17	novel	4222	19	NA	NA	2156	0	intron_retention	FALSE	canonical	3	144	junction_4	8.97552226892675	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36239541	36243173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241784_36242040
ES.15140.88	chr17	+	174	1	Intergenic	novelGene_12635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATGAACTTA	NA	False	NA	NA	False	NA	NA	NA	36266213	36266387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36266200_36266400
ES.15140.89	chr17	+	175	1	Intergenic	novelGene_12637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAGAAGAAAAAA	7474	False	NA	NA	False	NA	NA	NA	36278931	36279106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36278900_36279100
ES.15140.9	chr17	+	178	1	Intergenic	novelGene_12629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	36182685	36182863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36182700_36182900
ES.15140.90	chr17	+	2827	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-526	547	-526	-547	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGGGAGGCTTTTTGC	NA	False	NA	71	True	NA	NA	NA	36290216	36299807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.91	chr17	+	3360	12	NNC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	-525	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	184.6984139949	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAGCAGAGCGGCT	NA	False	NA	NA	False	AATGAA	-41	NA	36290217	36300348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292515_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.92	chr17	+	3276	12	NNC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	-498	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	184.618525614306	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAATGAAACGT	NA	False	NA	NA	False	AAAAAG	-7	NA	36290244	36300292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292457_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.93	chr17	+	2977	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-496	367	-496	-367	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGGCCTTGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	36290246	36299987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.95	chr17	+	3039	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	-191	0	-191	0	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGAGCGGCTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	36290551	36300354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.96	chr17	+	3032	11	NIC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	115	-596	intron_retention	FALSE	canonical	3	575	junction_1	38.1377765476699	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCTTCCCCAGGTGGCC	NA	False	NA	22	True	AATAAA	-16	NA	36290857	36299758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.97	chr17	+	2286	12	NNC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	138	-596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.782829870299	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCTTCCCCAGGTGGCC	NA	False	NA	22	True	AATAAA	-16	NA	36290880	36299758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36291140_36291336_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15140.98	chr17	+	2590	13	NNC	ENSMUSG00000024429.10	novel	2848	12	NA	NA	243	-62	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	235.041530018279	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAATGAAACGT	NA	False	NA	NA	False	AAAAAG	-7	NA	36290985	36300292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36297752_36297800_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ES.15141.1	chr17	-	3437	1	Antisense	novelGene_ENSMUSG00000059791.15_AS_novelGene_ENSMUSG00000034595.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36177071	36173634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_36173600_36177100
ES.15141.2	chr17	-	3216	1	Genic_Genomic	ENSMUSG00000087443.2	novel	NA	NA	NA	NA	-108	-2861	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGGTGAGACTCTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36177886	36174670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36174700_36177900
ES.15142.1	chr17	-	177	1	Intergenic	novelGene_12630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	2170	False	NA	NA	False	NA	NA	NA	36188071	36187894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36187900_36188100
ES.15143.1	chr17	-	153	1	Intergenic	novelGene_12631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACCCACTAAGAATA	NA	False	NA	NA	False	NA	NA	NA	36195309	36195156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36195200_36195300
ES.15144.1	chr17	-	1394	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	-7	-94	-7	94	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGCTGCAAGGTTT	NA	False	NA	91	True	ATTAAA	-11	NA	36208330	36203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ES.15144.10	chr17	-	1348	7	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	182.945043356984	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGGTTTTCACGTC	NA	False	NA	-7	True	AATAAA	-15	NA	36207985	36203572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207151_36207338_36207871
ES.15144.12	chr17	-	1520	4	NIC	ENSMUSG00000050705.16	novel	1293	6	NA	NA	6	2	intron_retention	FALSE	canonical	3	184	junction_3	107.809502776374	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGGTTTTCACGTC	NA	False	NA	-7	True	AATAAA	-15	NA	36208317	36203572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36204002_36205810_36206265_36206562_36206965_36208082
ES.15144.13	chr17	-	1255	7	NNC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	184.099987929265	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGGTTTTCACGTC	NA	False	NA	-7	True	AATAAA	-15	NA	36207986	36203572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207059_36207152_36207871
ES.15144.14	chr17	-	1026	6	NNC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	191.284709268671	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATAAGGCAGGTTTTCA	NA	False	NA	-11	True	AATAAA	-11	NA	36207985	36203576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36203859_36203931_36204002_36205810_36205945_36206175_36206265_36206562_36206965_36207936
ES.15144.15	chr17	-	1114	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATAAGGCAGGTTTT	NA	False	NA	-13	True	AATAAA	-9	NA	36208008	36203578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
ES.15144.16	chr17	-	1798	4	ISM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	35	1342	35	1025	5prime_fragment	FALSE	canonical	3	184	junction_3	87.6901109336484	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36208288	36204910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36206012_36206175_36206265_36206562_36206965_36208082
ES.15144.17	chr17	-	3266	1	Genic_Genomic	ENSMUSG00000050705.16	novel	NA	NA	NA	NA	-21	857	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAACCAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36208344	36205078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36205100_36208300
ES.15144.18	chr17	-	2835	2	NIC	ENSMUSG00000050705.16	novel	596	4	NA	NA	-38	826	intron_retention	FALSE	canonical	3	398	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36208242	36205109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36206265_36206562
ES.15144.19	chr17	-	2249	3	ISM	ENSMUSG00000050705.16	ENSMUST00000150056.2	596	4	-28	-653	2	653	intron_retention	FALSE	canonical	3	307	junction_1	45.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36207993	36205282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36206012_36206175_36206265_36206562
ES.15144.2	chr17	-	1237	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-15	94	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGCTGCAAGGTTT	NA	False	NA	91	True	ATTAAA	-11	NA	36208027	36203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
ES.15144.21	chr17	-	1362	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	-13	-9	-2	-5	multi-exon	FALSE	canonical	3	28	junction_5	34.4359508470988	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACTTGTCATTAT	NA	False	NA	-3	True	AATAAA	-33	NA	36220951	36208491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.22	chr17	-	1449	13	NNC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	39.1984799875369	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACTTGTCATTAT	NA	False	NA	-3	True	AATAAA	-33	NA	36220950	36208491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36208808_36209148_36209211_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.23	chr17	-	1333	11	NIC	ENSMUSG00000024426.18	novel	1388	12	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	44.8905335232274	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACTTGTCATTAT	NA	False	NA	-3	True	AATAAA	-33	NA	36220951	36208491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.24	chr17	-	2211	1	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	-1230	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGTGACTTGTCATT	NA	False	NA	-5	True	AATAAA	-31	NA	36210704	36208493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36208500_36210700
ES.15144.25	chr17	-	1414	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	-16	-10	2	-7	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGTGACTTGTCATT	NA	False	NA	-5	True	AATAAA	-31	NA	36220965	36208493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.26	chr17	-	1430	13	NIC	ENSMUSG00000024426.18	novel	1340	12	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	47.3321596098608	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGTGACTTGTCATT	NA	False	NA	-5	True	AATAAA	-31	NA	36220938	36208493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36213247_36213331_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.27	chr17	-	1386	12	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	38.0604130471848	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220959	36208501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36208808_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.28	chr17	-	1815	11	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	7	-1	intron_retention	FALSE	canonical	3	70	junction_3	26.6390690528029	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220916	36208501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.29	chr17	-	2266	11	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	54	-1	intron_retention	FALSE	canonical	1	2	junction_4	48.8462895213137	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220847	36208501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36209360_36212259_36212504_36212874_36212947_36213247_36213331_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322
ES.15144.3	chr17	-	1176	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	15	2	-2	-2	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36207997	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ES.15144.30	chr17	-	3828	13	NNC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.06177916668	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220949	36208501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36208808_36209148_36209192_36209279_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219975_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.31	chr17	-	1289	11	NIC	ENSMUSG00000024426.18	novel	1340	12	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	44.6434765671313	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTACCGACAAAAAGTGAC	NA	False	NA	-13	True	AATAAA	-23	NA	36220931	36208501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36208808_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.32	chr17	-	1446	9	NIC	ENSMUSG00000024426.18	novel	1340	12	NA	NA	139	1	intron_retention	FALSE	canonical	3	28	junction_4	36.2525861146484	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTACCGACAAAAAGTGA	NA	False	NA	-14	True	AATAAA	-22	NA	36220188	36208502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150
ES.15144.33	chr17	-	3136	7	NNC	ENSMUSG00000024426.18	novel	882	10	NA	NA	371	-1	intron_retention	FALSE	canonical	0	0	junction_4	40.3883921717889	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCTACCGACAAAAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	36219482	36208504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212702_36212874_36215069_36215181_36215228_36219454
ES.15144.34	chr17	-	1696	14	NNC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.7976262278518	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCTACCGACAAAAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	36220948	36208504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212702_36212874_36212947_36213247_36213331_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.35	chr17	-	1426	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	8	18	8	-1	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCTACCGACAAAAAGT	NA	False	NA	-16	True	AATAAA	-20	NA	36220959	36208504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.36	chr17	-	2017	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	0	17	0	-17	multi-exon	FALSE	canonical	3	5	junction_1	41.2200194080498	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATCTTAAGGTTTCA	NA	False	NA	NA	False	AATAAA	-42	NA	36220937	36210725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.37	chr17	-	975	9	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	-35	1485	-5	647	5prime_fragment	FALSE	canonical	3	28	junction_2	36.2299513524377	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGATGAAGTTAGCAGT	NA	False	NA	NA	False	AATAAA	-24	NA	36220972	36212228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.38	chr17	-	5054	1	NIC	ENSMUSG00000024426.18	novel	1452	13	NA	NA	609	32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGACAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	36219244	36214190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36214200_36219200
ES.15144.39	chr17	-	1655	7	NIC	ENSMUSG00000024426.18	novel	2034	11	NA	NA	0	28	intron_retention	FALSE	canonical	3	81	junction_1	21.1062128820455	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	36220937	36214194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36215069_36215181_36215228_36219454_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.4	chr17	-	4139	12	Fusion	ENSMUSG00000024426.18_ENSMUSG00000050705.16	novel	1340	12	NA	NA	7	-2	intron_retention	TRUE	canonical	0	0	junction_4	133.623808934073	250	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36220960	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_36204002_36205810_36205945_36206175_36206265_36206562_36209360_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.40	chr17	-	1482	8	ISM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	-15	3486	-3	28	5prime_fragment	FALSE	canonical	3	81	junction_1	20.218197501362	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	36220952	36214194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ES.15144.41	chr17	-	1824	5	NIC	ENSMUSG00000024426.18	novel	1930	10	NA	NA	-1	28	intron_retention	FALSE	canonical	3	112	junction_2	11.8953772533703	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	36220950	36214194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36215228_36219454_36219557_36219744_36220243_36220322_36220384_36220820
ES.15144.42	chr17	-	1598	7	NIC	ENSMUSG00000024426.18	novel	2034	11	NA	NA	8	27	intron_retention	FALSE	canonical	3	81	junction_1	20.9098594500829	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAAGAAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	36220959	36214195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220243_36220322_36220384_36220820
ES.15144.44	chr17	-	1844	5	NIC	ENSMUSG00000024426.18	novel	1930	10	NA	NA	0	-6	intron_retention	FALSE	canonical	3	127	junction_3	5.93190525885234	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36220937	36214228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36215228_36219454_36219859_36219979_36220243_36220322_36220384_36220820
ES.15144.45	chr17	-	2404	1	Genic_Genomic	ENSMUSG00000024426.18	novel	NA	NA	NA	NA	775	2182	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36219078	36216674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36216700_36219100
ES.15144.5	chr17	-	2243	4	NIC	ENSMUSG00000050705.16	novel	2081	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	398	junction_3	11.0252236056942	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36207993	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36203859_36203931_36204002_36205810_36206265_36206562
ES.15144.6	chr17	-	2106	5	FSM	ENSMUSG00000050705.16	ENSMUST00000146451.8	2081	5	-17	-8	-8	-2	multi-exon	FALSE	canonical	3	307	junction_3	46.1756158594555	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36208020	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562
ES.15144.7	chr17	-	1291	5	NNC	ENSMUSG00000050705.16	novel	1293	6	NA	NA	6	-2	intron_retention	FALSE	canonical	3	11	junction_2	168.763888317377	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36208317	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36204002_36205810_36205945_36206175_36206265_36206562_36206965_36208082
ES.15144.8	chr17	-	1102	6	NNC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	183.86190470024	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTTTTCACGTCAC	NA	False	NA	-5	True	AATAAA	-17	NA	36207977	36203570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36203859_36203931_36204015_36205810_36205945_36206175_36206265_36206562_36206965_36207871
ES.15144.9	chr17	-	1051	6	NNC	ENSMUSG00000050705.16	novel	1293	6	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	163.412851391805	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGGTTTTCACGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	36208151	36203571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36203859_36203931_36204002_36205810_36205945_36206175_36206265_36206562_36206965_36208082
ES.15145.1	chr17	-	1300	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	-217	-4	-217	4	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTTGGGCTGTCTGT	4079	False	NA	-2	True	AATAAA	-25	NA	36227498	36221266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ES.15145.10	chr17	-	4394	3	NIC	ENSMUSG00000024436.17	novel	907	4	NA	NA	9	-3	intron_retention	FALSE	canonical	3	1278	junction_2	48.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGACTCCCTTTGGGC	4317	False	NA	-9	True	AATAAA	-18	NA	36227260	36221273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36225482_36225587_36225697_36227183
ES.15145.11	chr17	-	2557	6	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	6	3	-6	-3	intron_retention	FALSE	canonical	3	1264	junction_4	57.164324538999	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGACTCCCTTTGGGC	4302	False	NA	-9	True	AATAAA	-18	NA	36227275	36221273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587
ES.15145.12	chr17	-	5573	4	NNC	ENSMUSG00000024436.17	novel	907	4	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	623.666755745584	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGACTCCCTTTGGGC	4310	False	NA	-9	True	AATAAA	-18	NA	36227267	36221273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36222800_36223025_36225295_36225383_36225482_36225587
ES.15145.13	chr17	-	4565	4	NIC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	3	3	intron_retention	FALSE	canonical	3	1327	junction_2	42.9185274677499	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTTGACTCCCTTTGGG	4311	False	NA	-10	True	AATAAA	-17	NA	36227266	36221274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36221849_36222310_36222371_36223229_36225482_36225587
ES.15145.15	chr17	-	2488	2	NNC	ENSMUSG00000024436.17	novel	743	3	NA	NA	-529	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTTGACTCCCTTTGGG	7590	False	NA	-10	True	AATAAA	-17	NA	36223987	36221274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36222774_36222998
ES.15145.16	chr17	-	2067	7	NNC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	500.831863558575	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCTTGACTCCCTTTGG	4303	False	NA	-11	True	AATAAA	-16	NA	36227274	36221275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36221849_36222310_36222371_36223229_36224297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ES.15145.17	chr17	-	999	6	NIC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	542.406858363719	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCTTGACTCCCTTTGG	4302	False	NA	-11	True	AATAAA	-16	NA	36227275	36221275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36221849_36222310_36222371_36223229_36223297_36225383_36225482_36225587_36225697_36227183
ES.15145.18	chr17	-	2503	5	ISM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-63	-465	-11	0	intron_retention	FALSE	canonical	3	24	junction_2	580.358671426558	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTTCTTGACTCCCTTT	4285	False	NA	-13	True	AATAAA	-14	NA	36227292	36221277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587
ES.15145.19	chr17	-	1357	8	NNC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	602.445932877645	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTTCTTGACTCCCTTT	4294	False	NA	-13	True	AATAAA	-14	NA	36227283	36221277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36226792_36226843_36226950
ES.15145.2	chr17	-	2995	6	NIC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1264	junction_3	62.2298963521554	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4309	False	NA	-6	True	AATAAA	-21	NA	36227268	36221270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36221849_36222310_36222371_36223229_36225295_36225383_36225482_36225587_36225697_36227183
ES.15145.20	chr17	-	5295	3	NNC	ENSMUSG00000024436.17	novel	441	3	NA	NA	7	46	intron_retention	FALSE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTTGATGGTGTGTCC	4315	False	NA	-84	True	TATAAA	-17	NA	36227262	36221348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36222800_36223025_36224317_36224709
ES.15145.3	chr17	-	2358	7	NNC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	502.923039175313	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4315	False	NA	-6	True	AATAAA	-21	NA	36227262	36221270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36226187_36226375
ES.15145.4	chr17	-	1021	6	FSM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-62	-471	-10	-1	multi-exon	FALSE	canonical	3	24	junction_2	528.957313967772	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCCCTTTGGGCTG	4286	False	NA	-7	True	AATAAA	-20	NA	36227291	36221271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ES.15145.5	chr17	-	3456	6	NNC	ENSMUSG00000024436.17	novel	488	6	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	538.492116933944	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGACTCCCTTTGGGCT	4313	False	NA	-8	True	AATAAA	-19	NA	36227264	36221272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36221849_36222310_36224317_36224708_36225295_36225383_36225482_36225587_36225697_36227183
ES.15145.6	chr17	-	1181	6	NIC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1264	junction_4	59.1655305055232	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGACTCCCTTTGGGCT	4298	False	NA	-8	True	AATAAA	-19	NA	36227279	36221272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225697_36227183
ES.15145.8	chr17	-	2709	4	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	49	3	-3	-3	intron_retention	FALSE	canonical	3	1313	junction_3	53.1057644914582	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGACTCCCTTTGGGC	4345	False	NA	-9	True	AATAAA	-18	NA	36227232	36221273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225
ES.15145.9	chr17	-	3713	2	NNC	ENSMUSG00000024436.17	novel	743	3	NA	NA	-1700	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGACTCCCTTTGGGC	6419	False	NA	-9	True	AATAAA	-18	NA	36225158	36221273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36222799_36222970
ES.15146.1	chr17	-	3882	1	Intergenic	novelGene_12633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAACGTATTCTCCCCA	NA	False	NA	NA	False	NA	NA	NA	36234005	36230123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36230100_36234000
ES.15147.1	chr17	-	2148	2	Genic_Genomic	ENSMUSG00000049832.7	novel	327	1	NA	NA	-4211	164	multi-exon	FALSE	canonical	2	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGCAAAGCAAAGC	6811	False	NA	NA	False	AATAAA	-16	NA	36251053	36246351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36248326_36250879
ES.15147.2	chr17	-	173	1	Intergenic	novelGene_12634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGATTTGTGTAT	9729	False	NA	NA	False	NA	NA	NA	36248135	36247962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36248000_36248100
ES.15148.1	chr17	-	1663	1	Genic_Genomic	ENSMUSG00000038762.16	novel	NA	NA	NA	NA	1011	1304	mono-exon	FALSE	NA	NA	NA	NA	NA	882	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTTTATTTTTTTA	4177	False	NA	NA	False	NA	NA	NA	36268069	36266406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36266400_36268100
ES.15148.10	chr17	-	3298	23	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	187	5	combination_of_known_junctions	FALSE	canonical	1	7	junction_22	198.674242279805	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280466	36267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280218
ES.15148.11	chr17	-	3433	24	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-7	5	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_22	306.480910015875	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280660	36267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36279859_36280126_36280537
ES.15148.12	chr17	-	3146	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	200.053716959774	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280639	36267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276010_36280537
ES.15148.13	chr17	-	3375	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-44	3	intron_retention	FALSE	canonical	3	801	junction_11	70.0349020132105	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGGGGTGCTTCC	NA	False	NA	-9	True	AATAAA	-21	NA	36280697	36267707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.15	chr17	-	3242	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-1	2	intron_retention	FALSE	canonical	3	801	junction_12	70.7823465955259	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGGGGTGCTTC	NA	False	NA	-10	True	AATAAA	-20	NA	36280654	36267708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.16	chr17	-	4946	21	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	2	intron_retention	FALSE	non_canonical	0	0	junction_20	209.015932407078	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGGGGTGCTTC	NA	False	NA	-10	True	AATAAA	-20	NA	36280643	36267708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276114_36279637
ES.15148.18	chr17	-	3316	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	2	intron_retention	FALSE	canonical	3	801	junction_11	71.7049510145569	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGGGGTGCTTC	NA	False	NA	-10	True	AATAAA	-20	NA	36280643	36267708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.2	chr17	-	4061	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	9	-909	9	909	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTGGTGGTTTAGTG	NA	False	NA	NA	False	NA	NA	NA	36280644	36266801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.20	chr17	-	3172	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_20	195.081377383011	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGGGGTGCTTC	NA	False	NA	-10	True	AATAAA	-20	NA	36280668	36267708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36280537
ES.15148.22	chr17	-	3969	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-12	1	intron_retention	FALSE	canonical	3	801	junction_11	70.9417190375311	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGCCTGTGGGGTGCTT	NA	False	NA	-11	True	AATAAA	-19	NA	36280665	36267709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.23	chr17	-	3311	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	13	1	intron_retention	FALSE	canonical	3	801	junction_12	69.8268572971747	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGCCTGTGGGGTGCTT	NA	False	NA	-11	True	AATAAA	-19	NA	36280640	36267709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.25	chr17	-	3137	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	200.053716959774	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGCCTGTGGGGTGCTT	NA	False	NA	-11	True	AATAAA	-19	NA	36280642	36267709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280551
ES.15148.28	chr17	-	3182	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	203.254801819809	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGCCTGTGGGGTGCTT	NA	False	NA	-11	True	AATAAA	-19	NA	36280610	36267709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275905_36276016_36280537
ES.15148.3	chr17	-	3865	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-4	-700	-4	700	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGATTCGTATCAAAAG	NA	False	NA	NA	False	AGTAAA	-15	NA	36280657	36267010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.30	chr17	-	3097	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	202.304782955351	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280643	36267710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272941_36274035_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.32	chr17	-	3735	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-19	0	intron_retention	FALSE	canonical	3	801	junction_12	71.0377364504247	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280672	36267710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.33	chr17	-	7756	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	11	0	intron_retention	FALSE	canonical	3	801	junction_12	65.39287040649	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280642	36267710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968
ES.15148.34	chr17	-	3179	21	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	11	-1	intron_retention	FALSE	canonical	1	35	junction_4	204.088822574878	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280642	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269113_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.35	chr17	-	3296	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	801	junction_11	67.3444121013009	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280668	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.37	chr17	-	1457	8	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	341.263558450841	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	1712	False	NA	-13	True	AATAAA	-17	NA	36270534	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270186_36270323
ES.15148.38	chr17	-	3355	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-1	intron_retention	FALSE	canonical	3	801	junction_10	67.9441682560027	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280644	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.39	chr17	-	3888	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	801	junction_11	71.6053368334969	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280670	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.4	chr17	-	3290	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	7	-136	7	136	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCTGCTGATGTAAG	NA	False	NA	NA	False	AATGAA	-26	NA	36280646	36267574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.41	chr17	-	3144	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	202.304782955351	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280644	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272970_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.42	chr17	-	1946	10	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-996	-1	intron_retention	FALSE	canonical	3	803	junction_8	68.3467918092524	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	744	False	NA	-13	True	AATAAA	-17	NA	36271502	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472
ES.15148.43	chr17	-	4198	19	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-1	intron_retention	FALSE	canonical	3	801	junction_8	69.8767875055713	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280644	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36270032_36270120_36270613_36270759_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.44	chr17	-	3259	22	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	278.378231744684	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280657	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268483_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271462_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.46	chr17	-	3165	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	26	-1	intron_retention	FALSE	canonical	1	2	junction_20	209.319588189925	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280627	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274688_36274808_36274939_36275145_36275233_36280537
ES.15148.47	chr17	-	3158	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	203.278175240053	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280657	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274814_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.48	chr17	-	3236	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	202.996809200181	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGGGGTGC	NA	False	NA	-13	True	AATAAA	-17	NA	36280644	36267711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274370_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.5	chr17	-	3355	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	15	125	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCGGGAACCCAGTCT	NA	False	NA	NA	False	AATGAA	-15	NA	36280638	36267585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.50	chr17	-	3124	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	200.053716959774	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGTGCCTGTGGGGTG	NA	False	NA	-14	True	AATAAA	-16	NA	36280639	36267712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280558
ES.15148.51	chr17	-	3111	22	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	205.332792207079	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGTGCCTGTGGGGTG	NA	False	NA	-14	True	AATAAA	-16	NA	36280662	36267712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269110_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.52	chr17	-	3149	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	266.478942619307	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGTGCCTGTGGGGTG	NA	False	NA	-14	True	AATAAA	-16	NA	36280661	36267712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275980_36276016_36280537
ES.15148.53	chr17	-	3433	24	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_22	262.708374402295	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGTGCCTGTGGGGTG	NA	False	NA	-14	True	AATAAA	-16	NA	36280661	36267712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36279859_36280126_36280537
ES.15148.57	chr17	-	3499	23	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-3	intron_retention	FALSE	canonical	1	4	junction_21	268.612416253027	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280644	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36279859_36280126_36280537
ES.15148.59	chr17	-	3350	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	803	junction_9	67.8590266655808	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280672	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.6	chr17	-	3217	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-44	-12	-44	12	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTGCTTCCTGGGCTTTT	NA	False	NA	0	True	AATAAA	-30	NA	36280697	36267698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.61	chr17	-	3139	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	271.563304036414	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280644	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270333_36270613_36270759_36270881_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.62	chr17	-	3896	20	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	-3	intron_retention	FALSE	canonical	3	37	junction_17	208.828151061825	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280643	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36271090_36271472_36271622_36271706_36271847_36271934_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36280537
ES.15148.63	chr17	-	3101	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	204.280286308174	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280643	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36280537
ES.15148.64	chr17	-	3228	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	13	-3	intron_retention	FALSE	canonical	3	801	junction_11	70.6627838748468	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	False	NA	-15	True	AATAAA	-15	NA	36280640	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.65	chr17	-	3910	3	FSM	ENSMUSG00000077931.3_ENSMUSG00000038762.16	ENSMUST00000087205.7	724	3	-1338	-1848	-138	-3	multi-exon	FALSE	canonical	3	947	junction_1	15	882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	-1	True	NA	-15	True	AATAAA	-15	NA	36271844	36267713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36270032_36270120_36270196_36270327
ES.15148.66	chr17	-	3051	22	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	271.459806055804	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCATGTGCCTGTGGGG	NA	False	NA	-16	True	AATAAA	-14	NA	36280664	36267714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274933_36275145_36275233_36275968_36276016_36280537
ES.15148.69	chr17	-	3219	22	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	14	-5	intron_retention	FALSE	canonical	0	0	junction_15	206.881816909559	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280639	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272970_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.7	chr17	-	3334	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-84	5	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280737	36267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.70	chr17	-	3363	21	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-8	-5	intron_retention	FALSE	canonical	0	0	junction_18	211.989734421269	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280661	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274969_36275145_36275233_36275968_36276016_36280537
ES.15148.71	chr17	-	3243	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	801	junction_11	71.1338682406936	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280655	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.72	chr17	-	3351	21	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	-5	intron_retention	FALSE	canonical	3	801	junction_11	65.9726268993436	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280643	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.74	chr17	-	3134	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	200.053716959774	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280638	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280544
ES.15148.75	chr17	-	3235	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	10	-5	intron_retention	FALSE	canonical	3	801	junction_11	71.0693187849888	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCATGTGCCTGTGGG	NA	False	NA	-17	True	AATAAA	-13	NA	36280643	36267715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.76	chr17	-	3124	22	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	208.035842019172	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGACACCATGTGCCTG	NA	False	NA	-21	True	AATAAA	-9	NA	36280642	36267719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274787_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.77	chr17	-	2956	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	-17	222	-17	-222	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGACCCTGGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	36280670	36267932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15148.78	chr17	-	215	1	Intergenic	novelGene_12636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	825	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	36272511	36272296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36272300_36272500
ES.15148.8	chr17	-	3131	23	NNC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_12	201.464929376294	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGGGTGCTTCCTG	NA	False	NA	-7	True	AATAAA	-23	NA	36280642	36267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271823_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ES.15149.1	chr17	-	2416	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-61	9	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTGTTGCAGTCC	NA	False	NA	8	True	AATAAA	-25	NA	36291189	36283423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
ES.15149.10	chr17	-	972	4	FSM	ENSMUSG00000038500.16	ENSMUST00000174849.8	581	4	-15	-376	-15	-28	multi-exon	FALSE	canonical	3	33	junction_3	46.54985380094	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAAATAAACATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	36290715	36288679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36289336_36289602_36289674_36290018_36290148_36290599
ES.15149.4	chr17	-	1524	4	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	57.817721235698	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290145	36283432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36284696_36289272_36289336_36289602_36289674_36290018
ES.15149.5	chr17	-	1999	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	728	0	18	0	multi-exon	FALSE	canonical	3	22	junction_3	38.4216374224502	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36290400	36283432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
ES.15149.6	chr17	-	1506	3	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	8	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTCTCTCATTTCTCT	NA	False	NA	-2	True	AATAAA	-15	NA	36290199	36283433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36284696_36289272_36289336_36290018
ES.15149.7	chr17	-	2612	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	33	junction_4	28.9913780286484	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATCTTCTCTCATTTCTC	NA	False	NA	-3	True	AATAAA	-14	NA	36291129	36283434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36284696_36285414_36285706_36289272_36289674_36290018_36290148_36290599
ES.15149.9	chr17	-	1311	5	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	-6	407	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	22.0056810846654	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCGGTGTCCGTGGCGG	NA	False	NA	NA	False	NA	NA	NA	36290197	36283988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018
ES.1515.1	chr1	-	181	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGATAGATAC	8278	False	NA	2	True	NA	NA	NA	139486412	139486231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_139486200_139486400
ES.15150.1	chr17	-	134	1	Intergenic	novelGene_12638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAACCAAATAAA	NA	False	NA	NA	False	NA	NA	NA	36305205	36305071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36305100_36305200
ES.15151.1	chr17	-	6017	2	NNC	ENSMUSG00000053835.18	novel	884	3	NA	NA	2196	487	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGAGGTGAAATCTGA	NA	False	NA	NA	False	NA	NA	NA	36329221	36316099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36318030_36325134
ES.15152.1	chr17	-	2358	7	NIC	ENSMUSG00000056116.19	novel	1761	9	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	0.74535599249993	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTAAATCTATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	36353604	36349300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351369_36352578_36352759_36353021_36353233
ES.15153.1	chr17	+	176	1	Antisense	novelGene_ENSMUSG00000073406.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCACACAATTAA	NA	False	NA	NA	False	NA	NA	NA	36392442	36392618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36392400_36392600
ES.15154.1	chr17	+	3507	1	Antisense	novelGene_ENSMUSG00000073406.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTGAATTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	36394595	36398102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36394600_36398100
ES.15154.2	chr17	+	4956	1	Antisense	novelGene_ENSMUSG00000073406.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTGTTGTGCTTATC	NA	False	NA	NA	False	NA	NA	NA	36394610	36399566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36394600_36399600
ES.15155.1	chr17	-	1655	1	Intergenic	novelGene_12642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGACTTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-45	NA	36389922	36388267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36388300_36389900
ES.15155.11	chr17	-	1205	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	-24	-76	-24	2	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395139	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
ES.15155.12	chr17	-	1138	6	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	223.410474239683	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395139	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394327_36394587_36394832_36395051
ES.15155.14	chr17	-	930	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-25	-76	-25	2	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395140	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
ES.15155.15	chr17	-	3799	3	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-8	2	intron_retention	FALSE	canonical	3	343	junction_2	26	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395123	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36392008_36392133_36394858_36395051
ES.15155.17	chr17	-	1281	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	-67	-76	-67	2	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395182	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
ES.15155.18	chr17	-	764	4	NNC	ENSMUSG00000073406.11	novel	1072	3	NA	NA	1024	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	238.706235081254	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36394061	36391006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36391216_36391890_36392008_36392133_36392410_36393899
ES.15155.19	chr17	-	966	5	FSM	ENSMUSG00000073406.11	ENSMUST00000185167.8	836	5	-56	-74	-56	0	multi-exon	FALSE	canonical	3	9	junction_4	210.516626421763	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36395171	36391006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394832_36395051
ES.15155.2	chr17	-	3129	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	-25	-2275	-25	2201	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAGAATTGCCTGTC	NA	False	NA	NA	False	AATAAA	-10	NA	36395140	36388805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
ES.15155.20	chr17	-	4133	1	Genic_Genomic	ENSMUSG00000073406.11	novel	NA	NA	NA	NA	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36395139	36391006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36391000_36395100
ES.15155.22	chr17	-	2910	5	NIC	ENSMUSG00000073406.11	novel	1105	6	NA	NA	-24	-8	intron_retention	FALSE	canonical	3	113	junction_4	196.230731538156	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTCCAGAAACTATGTT	NA	False	NA	-13	True	AATAAA	-14	NA	36395139	36391014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36391216_36391890_36392008_36392133_36394401_36394587_36394825_36395051
ES.15155.23	chr17	-	1796	3	ISM	ENSMUSG00000073406.11	ENSMUST00000185087.8	1064	6	-24	1808	-24	-1695	5prime_fragment	FALSE	canonical	1	1	junction_1	171	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTCCATTCTTTGACT	NA	False	NA	NA	False	ATTAAA	-17	NA	36395139	36392888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36394327_36394587_36394858_36395051
ES.15155.24	chr17	-	1840	3	NIC	ENSMUSG00000073406.11	novel	862	5	NA	NA	-25	-1700	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	53.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCCCTCTTCCATTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	36395140	36392893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36394401_36394587_36394832_36395051
ES.15155.3	chr17	-	5339	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-24	2201	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAGAATTGCCTGTC	NA	False	NA	NA	False	AATAAA	-10	NA	36395139	36388805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
ES.15155.5	chr17	-	3277	4	NIC	ENSMUSG00000073406.11	novel	1064	6	NA	NA	-158	5	intron_retention	FALSE	canonical	3	343	junction_3	99.8632398165945	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395273	36391001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36391216_36391890_36392008_36392133_36394858_36395051
ES.15155.6	chr17	-	3151	4	NIC	ENSMUSG00000073406.11	novel	1138	6	NA	NA	-25	5	intron_retention	FALSE	canonical	3	116	junction_3	189.209466523803	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCCTGCATTGAGC	NA	False	NA	0	True	AATAAA	-27	NA	36395140	36391001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36391216_36391890_36392008_36392133_36394401_36394587
ES.15155.7	chr17	-	1042	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	-104	-76	-104	2	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGTTTCCTGCATTG	NA	False	NA	-3	True	AATAAA	-24	NA	36395219	36391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
ES.15156.1	chr17	-	267	1	Intergenic	novelGene_12643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGAACCTAGACAGCA	NA	False	NA	NA	False	NA	NA	NA	36397045	36396778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36396800_36397000
ES.15156.2	chr17	-	157	1	Intergenic	novelGene_12644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	36397045	36396888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36396900_36397000
ES.15157.1	chr17	-	169	1	Intergenic	novelGene_12645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTCAATCTTAT	NA	False	NA	NA	False	NA	NA	NA	36399080	36398911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36398900_36399100
ES.15158.1	chr17	-	3421	8	NNC	ENSMUSG00000092243.9	novel	913	5	NA	NA	-82	2997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.494871659305393	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAATTGCCTGTCATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	36440399	36435373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36437604_36437887_36437936_36438058_36438107_36438270_36438385_36438500_36438777_36439365_36439633_36439786_36440057_36440231
ES.15159.1	chr17	+	159	1	Antisense	novelGene_ENSMUSG00000073403.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36453684	36453843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36453700_36453800
ES.15159.2	chr17	+	157	2	Antisense	novelGene_ENSMUSG00000092240.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	36453686	36517712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36453736_36517604
ES.15159.3	chr17	+	184	1	Intergenic	novelGene_12646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36517555	36517739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36517600_36517700
ES.1516.1	chr1	+	320	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCCATGTTCGACTGTC	NA	False	NA	7	True	NA	NA	NA	139698353	139698673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_139698400_139698700
ES.15160.1	chr17	+	141	1	Intergenic	novelGene_12647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	36546406	36546547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36546400_36546500
ES.15161.1	chr17	+	190	1	Intergenic	novelGene_12648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTAGGACAGACTGAG	NA	False	NA	NA	False	NA	NA	NA	36547857	36548047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36547900_36548000
ES.15162.1	chr17	-	203	1	Antisense	novelGene_ENSMUSG00000092392.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACAATATACTTTTTT	NA	False	NA	NA	False	AAGAAA	-6	NA	36564078	36563875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_36563900_36564100
ES.15163.1	chr17	+	5840	1	Antisense	novelGene_ENSMUSG00000024446.14_AS_novelGene_ENSMUSG00000045409.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36568538	36574378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_36568500_36574400
ES.15164.1	chr17	-	3226	1	Genic_Genomic	ENSMUSG00000024446.14	novel	NA	NA	NA	NA	-11	1003	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAAACTGGGTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	36568759	36565533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_36565500_36568800
ES.15164.10	chr17	-	529	5	NNC	ENSMUSG00000024446.14	novel	729	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	306.572177472125	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36568737	36566564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36566691_36566835_36566992_36568333_36568417_36568497_36568599_36568674
ES.15164.13	chr17	-	434	4	NNC	ENSMUSG00000024446.14	novel	729	5	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	347.392509354412	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTGTTCTGTGGTA	NA	False	NA	-24	True	AATAAA	-12	NA	36568765	36566566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36566691_36566825_36566962_36568333_36568417_36568674
ES.15164.14	chr17	-	3446	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	117	-359	-67	359	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTGTCTGGTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	36582342	36569405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.15	chr17	-	3064	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	141	-1	-43	1	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	-7	True	NA	NA	NA	36582318	36569763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.16	chr17	-	3106	7	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-61	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	19.4028921097403	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	-7	True	NA	NA	NA	36582336	36569763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.17	chr17	-	4170	7	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-44	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	16.4359024360967	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	False	NA	-7	True	NA	NA	NA	36582319	36569763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36571814_36572382_36572499_36573001_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.18	chr17	-	2895	7	NNC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3809038890002	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582291	36569764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36571673_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.19	chr17	-	5748	6	ISM	ENSMUSG00000045409.17	ENSMUST00000042717.13	3085	7	163	0	163	0	3prime_fragment	FALSE	canonical	3	42	junction_1	6.79411510058521	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582733	36569764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
ES.15164.2	chr17	-	4604	11	Fusion	ENSMUSG00000024446.14_ENSMUSG00000045409.17	novel	3204	7	NA	NA	-41	-11	multi-exon	FALSE	canonical	3	42	junction_5	325.851331131238	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAACTGGTTATATCAT	NA	False	NA	-5	True	AATAAA	-31	NA	36582316	36566547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.20	chr17	-	5587	6	FSM	ENSMUSG00000045409.17	ENSMUST00000173369.2	2914	6	-2436	-237	-89	0	multi-exon	FALSE	canonical	3	11	junction_1	19.0682982984848	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582548	36569764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
ES.15164.21	chr17	-	4635	6	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	42	junction_1	9.54148835350125	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582294	36569764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36571814_36572382_36572499_36573001_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.22	chr17	-	3174	8	NNC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.1390974839787	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCTTGAGTTGCGTGGT	NA	False	NA	-9	True	NA	NA	NA	36582313	36569765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36578593_36578711_36579500_36579959_36582228
ES.15164.25	chr17	-	3226	7	NNC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	169	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.4864298259778	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGATCTCTTGAGTTG	NA	False	NA	-15	True	NA	NA	NA	36582727	36569771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582467
ES.15164.26	chr17	-	2821	7	NNC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	56	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.4864298259778	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCAGATGCATGCCAAA	NA	False	NA	NA	False	NA	NA	NA	36582403	36569983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582336
ES.15164.27	chr17	-	5551	6	ISM	ENSMUSG00000045409.17	ENSMUST00000042717.13	3085	7	137	223	137	14	3prime_fragment	FALSE	canonical	3	42	junction_1	6.79411510058521	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTACCAGATGCATGC	NA	False	NA	NA	False	NA	NA	NA	36582759	36569987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
ES.15164.28	chr17	-	2852	7	NIC	ENSMUSG00000045409.17	novel	3204	7	NA	NA	-31	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	19.4028921097403	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTACCAGATGCATGC	NA	False	NA	NA	False	NA	NA	NA	36582306	36569987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.29	chr17	-	2806	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	161	237	-23	0	multi-exon	FALSE	canonical	3	42	junction_1	8.81286937760152	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTTTGTCACAAAAGG	NA	False	NA	NA	False	NA	NA	NA	36582298	36570001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.3	chr17	-	600	4	NIC	ENSMUSG00000024446.14	novel	729	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	710	junction_3	28.7672653471886	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568751	36566558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36566691_36566835_36566962_36568333_36568599_36568674
ES.15164.30	chr17	-	2011	4	ISM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	129	3732	-55	0	5prime_fragment	FALSE	canonical	3	58	junction_1	6.37704215656966	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTGTGTTTGTCAT	NA	False	NA	0	True	ATTAAA	-20	NA	36582330	36573496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.31	chr17	-	1507	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-42	0	-42	0	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTGTGTTTGTCAT	NA	False	NA	0	True	ATTAAA	-20	NA	36582317	36573496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.32	chr17	-	1284	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	-42	223	-42	-221	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTATGTTGTAG	NA	False	NA	NA	False	TATAAA	-9	NA	36582317	36573719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15164.4	chr17	-	402	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	13	22	0	0	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
ES.15164.5	chr17	-	2184	1	NIC	ENSMUSG00000024446.14	novel	437	4	NA	NA	5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568742	36566558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_36566600_36568700
ES.15164.7	chr17	-	4479	9	Fusion	ENSMUSG00000024446.14_ENSMUSG00000045409.17	novel	3204	7	NA	NA	234	0	intron_retention	FALSE	canonical	0	0	junction_3	314.485591879819	206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36579878	36566564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_36566691_36566835_36566962_36568333_36568401_36568497_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
ES.15164.9	chr17	-	5999	9	Fusion	ENSMUSG00000024446.14_ENSMUSG00000045409.17	novel	3204	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	42	junction_3	278.652084820839	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36582280	36566564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_36566691_36566835_36568417_36568497_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ES.15165.1	chr17	+	3821	1	Intergenic	novelGene_12649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCGTTTTTGGTTTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	36588383	36592204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_36588400_36592200
ES.15166.1	chr17	-	5013	1	Intergenic	novelGene_12650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	36790053	36785040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_36785000_36790100
ES.15167.1	chr17	+	3355	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-160	0	intron_retention	FALSE	non_canonical	0	0	junction_5	88.8776370916779	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37147865	37170290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.10	chr17	+	2643	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	0	-527	intron_retention	FALSE	non_canonical	0	0	junction_5	88.8776370916779	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37148032	37169745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.11	chr17	+	4595	9	NIC	ENSMUSG00000024457.17	novel	1426	10	NA	NA	0	-527	intron_retention	FALSE	canonical	3	14	junction_1	80.071452465907	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37148032	37169745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148176_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.12	chr17	+	3105	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	104.245393379354	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCATCTGGTGCTGTC	NA	False	NA	27	True	AATAAA	-34	NA	37148035	37170286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.13	chr17	+	3256	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	115.370056773844	290	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148035	37170289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37158858_37158950_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.14	chr17	+	3196	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	114.068185838156	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148045	37170289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148166_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.15	chr17	+	2623	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	9	-527	intron_retention	FALSE	non_canonical	0	0	junction_4	107.743619300634	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37148046	37169745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163360_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.16	chr17	+	6120	8	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	10	-526	intron_retention	FALSE	canonical	3	108	junction_1	51.0174039931873	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148047	37169746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.17	chr17	+	2640	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-12	-523	intron_retention	FALSE	canonical	0	0	junction_5	89.3383844647725	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAGGAAGTTTTTAA	NA	False	NA	10	True	AATAAA	-20	NA	37148052	37169749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.18	chr17	+	3062	8	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-12	-534	intron_retention	FALSE	canonical	3	63	junction_5	69.5448761298657	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCAGTCCTTGTGAAG	NA	False	NA	-1	True	AATAAA	-9	NA	37148052	37169738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167664_37167880_37167914_37168291
ES.15167.19	chr17	+	2351	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-12	718	intron_retention	FALSE	non_canonical	0	0	junction_4	104.245393379354	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTTTCCAAGGCCGT	NA	False	NA	NA	False	NA	NA	NA	37148052	37169549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.2	chr17	+	3181	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_5	94.4031735889926	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148020	37170290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.20	chr17	+	2611	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-11	-529	intron_retention	FALSE	canonical	0	0	junction_5	113.175860987244	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCTTGTGAAGGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	37148053	37169743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148378_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.21	chr17	+	4556	9	NIC	ENSMUSG00000024457.17	novel	3198	10	NA	NA	-11	-526	intron_retention	FALSE	canonical	3	153	junction_5	42.1478053995697	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148053	37169746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.22	chr17	+	5094	9	NNC	ENSMUSG00000024457.17	novel	3198	10	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_2	81.8886439013371	290	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148054	37170289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148461_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.24	chr17	+	5064	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	108	junction_1	53.5887114978519	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCATCTGGTGCTGTCT	NA	False	NA	28	True	AATAAA	-35	NA	37148054	37170287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.25	chr17	+	4520	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-10	-529	intron_retention	FALSE	canonical	3	108	junction_1	53.5887114978519	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCTTGTGAAGGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	37148054	37169743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.28	chr17	+	3058	9	NNC	ENSMUSG00000024457.17	novel	1426	10	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	115.156415366231	290	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCATCTGGTGCTGT	NA	False	NA	26	True	AATAAA	-33	NA	37148060	37170285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148176_37148356_37148465_37161695_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.3	chr17	+	6722	8	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	158	junction_1	34.8278565495601	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148020	37170289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.30	chr17	+	6621	8	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	108	junction_1	51.0174039931873	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAAATTTCAAGACAGT	NA	False	NA	13	True	AATAAA	-20	NA	37148072	37170272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.31	chr17	+	4427	9	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-1	1281	intron_retention	FALSE	non_canonical	0	0	junction_5	88.8776370916779	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGGCCCTTAGGTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	37148074	37171571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.32	chr17	+	3166	8	NNC	ENSMUSG00000024457.17	novel	1426	10	NA	NA	1	8	intron_retention	FALSE	canonical	0	0	junction_5	110.990898689202	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGACAGTCATCTGGT	NA	False	NA	21	True	AATAAA	-28	NA	37148076	37170280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148176_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.33	chr17	+	1393	9	NNC	ENSMUSG00000024457.17	novel	1406	10	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.387427865363	290	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTCATCTGGTGCTG	NA	False	NA	25	True	AATAAA	-32	NA	37148078	37170284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148461_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37170030
ES.15167.35	chr17	+	4300	1	Intergenic	novelGene_12651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCAGGATAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	37154910	37159210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37154900_37159200
ES.15167.36	chr17	+	7313	6	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3227	-529	intron_retention	FALSE	canonical	3	225	junction_3	16.2554606209729	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCTTGTGAAGGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	37160166	37169743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37162021_37162118_37162215_37163354_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.37	chr17	+	1840	6	ISM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	15352	527	-4	-527	3prime_fragment	FALSE	canonical	3	153	junction_1	43.8935074925666	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37163389	37169745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.38	chr17	+	1405	4	ISM	ENSMUSG00000024457.17	ENSMUST00000156872.2	2249	5	1341	993	1341	466	3prime_fragment	FALSE	canonical	3	225	junction_1	19.6015872373189	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGTCTTGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	37166866	37169297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.39	chr17	+	1486	2	ISM	ENSMUSG00000024457.17	ENSMUST00000156872.2	2249	5	2354	547	2354	-529	3prime_fragment	FALSE	canonical	3	272	junction_1	0	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCTTGTGAAGGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	37167879	37169743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37167914_37168291
ES.15167.4	chr17	+	3233	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3	3	intron_retention	FALSE	non_canonical	0	0	junction_5	83.9224902812113	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGCTGTCTCTTATT	NA	False	NA	34	True	AATAAA	-41	NA	37148022	37170293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.40	chr17	+	2019	2	ISM	ENSMUSG00000024457.17	ENSMUST00000156872.2	2249	5	2354	14	2354	4	3prime_fragment	FALSE	canonical	3	272	junction_1	0	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTCAAGACAGTCATC	NA	False	NA	17	True	AATAAA	-24	NA	37167879	37170276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37167914_37168291
ES.15167.41	chr17	+	5211	1	Genic_Genomic	ENSMUSG00000024457.17	novel	NA	NA	NA	NA	3102	3548	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGTGCATATATATGT	NA	False	NA	NA	False	AATAAA	-13	NA	37168627	37173838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_37168600_37173800
ES.15167.5	chr17	+	3210	8	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	89.3383844647725	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTGGTGCTGTCTCT	NA	False	NA	30	True	AATAAA	-37	NA	37148022	37170289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.6	chr17	+	2633	8	NNC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	-1	-526	intron_retention	FALSE	canonical	0	0	junction_5	94.4031735889926	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAGGAAGTTTT	NA	False	NA	7	True	AATAAA	-17	NA	37148024	37169746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163607_37167547_37167664_37167880_37167914_37168291
ES.15167.7	chr17	+	2683	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-1	-527	intron_retention	FALSE	non_canonical	0	0	junction_5	83.9224902812113	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTGTGAAGGAAGTTT	NA	False	NA	6	True	AATAAA	-16	NA	37148024	37169745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15167.8	chr17	+	716	1	Genic_Genomic	ENSMUSG00000024457.17	novel	NA	NA	NA	NA	-1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37148024	37148740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_37148000_37148700
ES.15167.9	chr17	+	4086	9	NNC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	-1	858	intron_retention	FALSE	non_canonical	0	0	junction_5	83.9224902812113	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGCTGGCCTCAGAC	NA	False	NA	NA	False	ATTAAA	-25	NA	37148024	37171148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167076_37167117_37167547_37167664_37167880_37167914_37168291
ES.15168.1	chr17	+	1714	7	FSM	ENSMUSG00000073400.7	ENSMUST00000060524.11	2245	7	523	8	523	-8	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAAGCATCTTCTTTG	5274	False	NA	NA	False	AATAAA	-12	NA	37180988	37188717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37181200_37182564_37182661_37183230_37183462_37184164_37184188_37185057_37185174_37186321_37186355_37187713
ES.15169.1	chr17	-	3422	2	NIC	ENSMUSG00000073399.10	novel	1539	5	NA	NA	3915	2	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATGGGTCTCTCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	37196510	37192487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37194257_37194857
ES.1517.1	chr1	-	436	1	FSM	ENSMUSG00000104496.2	ENSMUST00000191844.2	1369	1	1107	-174	1107	174	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGATAAAAAAAAAAATATT	2467	False	NA	NA	False	AATAAA	-19	NA	139856239	139855803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_139855800_139856200
ES.15170.1	chr17	-	172	1	Intergenic	novelGene_12652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAATGAGACTTAT	NA	False	NA	NA	False	NA	NA	NA	37213467	37213295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37213300_37213500
ES.15171.1	chr17	+	176	1	Intergenic	novelGene_12653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTATGTGACG	NA	False	NA	NA	False	NA	NA	NA	37244394	37244570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37244400_37244600
ES.15172.1	chr17	+	257	1	Intergenic	novelGene_12654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCATCTACTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	37246095	37246352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37246100_37246400
ES.15173.1	chr17	-	3835	1	Genic_Genomic	ENSMUSG00000036398.14	novel	NA	NA	NA	NA	2296	3148	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAACTCACCGTCTCCAT	NA	False	NA	NA	False	AAGAAA	-10	NA	37259934	37256099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_37256100_37259900
ES.15173.2	chr17	-	1585	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	24	-10	24	10	multi-exon	FALSE	canonical	3	708	junction_2	5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGGCCCATTTATAC	NA	False	NA	NA	False	AATAAA	-25	NA	37262581	37259237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37260447_37260768_37260878_37262314
ES.15173.3	chr17	-	1308	3	NNC	ENSMUSG00000036398.14	novel	1599	3	NA	NA	-49	-392	intron_retention	FALSE	canonical	0	0	junction_1	354	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATAGC	NA	False	NA	NA	False	NA	NA	NA	37262682	37259639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37260471_37260768_37260878_37262314
ES.15173.4	chr17	-	757	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	-77	919	-49	15	multi-exon	FALSE	canonical	3	708	junction_2	5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCCCCTTCTTCCGT	NA	False	NA	0	True	AATATA	-38	NA	37262682	37260166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37260447_37260768_37260878_37262314
ES.15173.5	chr17	-	545	4	FSM	ENSMUSG00000036398.14	ENSMUST00000174711.8	520	4	-21	-4	-21	4	multi-exon	FALSE	canonical	1	4	junction_3	334.250737554243	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTCCGTTCTCCTGCCC	NA	False	NA	-11	True	AATATA	-27	NA	37262654	37260177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37260447_37260768_37260878_37262314_37262401_37262573
ES.15174.1	chr17	-	841	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	53	-184	2	182	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAACTATAA	NA	False	NA	NA	False	NA	NA	NA	37269372	37265065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ES.15174.2	chr17	-	605	5	NNC	ENSMUSG00000036315.14	novel	710	5	NA	NA	18	11	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_4	267.969564503135	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTTACTCTTAATCA	NA	False	NA	0	True	ACTAAA	-28	NA	37269356	37265236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269140_37269269
ES.15174.3	chr17	-	733	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	-15	-8	11	6	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATGTGTGTTACTCTT	NA	False	NA	-5	True	ACTAAA	-23	NA	37269440	37265241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ES.15174.4	chr17	-	603	5	FSM	ENSMUSG00000036315.14	ENSMUST00000174466.2	584	5	66	-85	-11	0	multi-exon	FALSE	canonical	3	45	junction_4	268.393833759272	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGATGTTATGTGTG	NA	False	NA	-13	True	ACTAAA	-15	NA	37269385	37265249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269122_37269269
ES.15175.1	chr17	+	1076	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	-54	-2	-5	-1	multi-exon	FALSE	canonical	3	19	junction_1	112	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGCTAATGGTACCAT	NA	False	NA	19	True	AATAAA	-19	NA	37269478	37276516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37269688_37275248_37275325_37275725
ES.15175.10	chr17	+	173	1	Intergenic	novelGene_12655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTAGGGTTGAAACTGG	0	True	NA	NA	False	NA	NA	NA	37270528	37270701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37270500_37270700
ES.15175.11	chr17	+	3640	2	ISM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	2941	0	-2240	0	3prime_fragment	FALSE	canonical	3	243	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	1334	False	NA	17	True	AATAAA	-17	NA	37272473	37276514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37275325_37275725
ES.15175.2	chr17	+	998	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	-5	-17	-5	14	multi-exon	FALSE	canonical	0	0	junction_1	121.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTTCTTCTGCGATG	NA	False	NA	34	True	AATAAA	-34	NA	37269478	37276531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37269595_37275248_37275325_37275725
ES.15175.3	chr17	+	2492	2	NNC	ENSMUSG00000036214.15	novel	652	3	NA	NA	6	-1555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTTACATGTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	37269489	37274278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37271906_37274202
ES.15175.4	chr17	+	1179	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	8	-211	8	208	multi-exon	FALSE	canonical	0	0	junction_1	121.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGTGTTCTGGTTGT	NA	False	NA	NA	False	AAAACA	-27	NA	37269491	37276725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37269595_37275248_37275325_37275725
ES.15175.5	chr17	+	2218	1	NIC	ENSMUSG00000036214.15	novel	976	3	NA	NA	10	-4122	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGAAGAAATGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	37269493	37271711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37269500_37271700
ES.15175.6	chr17	+	3268	2	NNC	ENSMUSG00000036214.15	novel	652	3	NA	NA	-13	-1591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37269497	37274242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37270535_37272011
ES.15175.7	chr17	+	1511	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	28	-887	6	203	multi-exon	FALSE	canonical	3	30	junction_1	106.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTATCTTTTGTGTTCTG	NA	False	NA	NA	False	AAAACA	-22	NA	37269538	37276720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37269979_37275248_37275325_37275725
ES.15175.8	chr17	+	1293	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	41	-682	19	1	multi-exon	FALSE	canonical	3	30	junction_1	106.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	False	NA	18	True	AATAAA	-18	NA	37269551	37276515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37269979_37275248_37275325_37275725
ES.15175.9	chr17	+	1535	3	NNC	ENSMUSG00000036214.15	novel	1020	3	NA	NA	51	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTTTGCTAATGGTAC	NA	False	NA	16	True	AATAAA	-16	NA	37269583	37276513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37270255_37275248_37275325_37275725
ES.15176.1	chr17	-	156	1	Intergenic	novelGene_12656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	37273364	37273208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37273200_37273400
ES.15177.1	chr17	+	4113	1	Antisense	novelGene_ENSMUSG00000083534.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAACAAAAAAC	2746	False	NA	NA	False	NA	NA	NA	37278820	37282933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37278800_37282900
ES.15177.2	chr17	+	3190	2	Antisense	novelGene_ENSMUSG00000083534.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAACAACAAAACAAAAA	3546	False	NA	NA	False	NA	NA	NA	37279620	37282931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37280207_37280327
ES.15177.3	chr17	+	2321	4	Antisense	novelGene_ENSMUSG00000083534.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAACAAAAAAC	3546	False	NA	NA	False	NA	NA	NA	37279620	37282933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37280210_37280331_37280614_37281212_37281462_37281732
ES.15178.1	chr17	+	2079	1	Antisense	novelGene_ENSMUSG00000024459.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTCTTTTGTTTTCTG	NA	False	NA	NA	False	GATAAA	-19	NA	37299069	37301148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37299100_37301100
ES.15179.1	chr17	+	1866	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	-114	-3	-71	0	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTATTTGTTTTT	NA	False	NA	39	True	AATAAA	-44	NA	37313302	37321527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.10	chr17	+	1721	5	ISM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	1378	3	-13	-3	3prime_fragment	FALSE	canonical	3	426	junction_1	1230.59345439507	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAGGTCTTTGTATTT	NA	False	NA	33	True	AATAAA	-38	NA	37313432	37321521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ES.15179.11	chr17	+	3193	4	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-12	-20	intron_retention	FALSE	canonical	3	426	junction_1	1260.20430442404	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	16	True	AATAAA	-21	NA	37313433	37321504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37313670_37314177_37315796_37316941_37317087_37320310
ES.15179.12	chr17	+	4868	2	NIC	ENSMUSG00000036036.16	novel	1747	4	NA	NA	-10	0	intron_retention	FALSE	canonical	3	3339	junction_1	0	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTATTTGTTTTT	NA	False	NA	39	True	AATAAA	-44	NA	37313435	37321527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37317087_37320310
ES.15179.13	chr17	+	3345	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	19	-1615	-10	1612	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACCTTGGTTCCACTCT	NA	False	NA	NA	False	AGTAAA	-20	NA	37313435	37323139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.14	chr17	+	1670	4	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-10	-30	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	1449.17938464805	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313435	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37313670_37315688_37315796_37316941_37317087_37320310
ES.15179.15	chr17	+	1547	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-10	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAAGAAGGGGAGGGGA	NA	False	NA	9	True	AATAAA	-14	NA	37313435	37321497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313514_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.16	chr17	+	1669	5	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	-10	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1309.76543701535	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313435	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314161_37314208_37315688_37315796_37316950_37317087_37320310
ES.15179.18	chr17	+	1659	5	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	-10	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1309.76543701535	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGGAGGGGAGGT	NA	False	NA	12	True	AATAAA	-17	NA	37313435	37321500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ES.15179.19	chr17	+	3172	4	NNC	ENSMUSG00000036036.16	novel	1747	4	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	1458.01973771124	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTATTTGTTTTT	NA	False	NA	39	True	AATAAA	-44	NA	37313439	37321527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37315796_37316941_37317087_37320310
ES.15179.2	chr17	+	1621	5	FSM	ENSMUSG00000036036.16	ENSMUST00000172527.8	425	5	-36	-1160	-36	-30	multi-exon	FALSE	canonical	2	3	junction_1	1405.88868691657	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313337	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37313493_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.20	chr17	+	1839	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	29	-119	0	116	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTGTATTATTAATT	NA	False	NA	NA	False	AAAAAG	-13	NA	37313445	37321643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.21	chr17	+	1622	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1458.01973771124	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313445	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37315688_37315796_37316941_37317087_37320310
ES.15179.22	chr17	+	3274	4	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	1	118	intron_retention	FALSE	canonical	0	0	junction_1	1475.04508405676	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTATTATTAATTAG	NA	False	NA	NA	False	AAAAAG	-15	NA	37313446	37321645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37315796_37316950_37317087_37320310
ES.15179.23	chr17	+	1689	5	NIC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	1307.45408619194	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAGGTCTTTGTATTT	NA	False	NA	33	True	AATAAA	-38	NA	37313446	37321521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37313652_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ES.15179.24	chr17	+	3679	3	FSM	ENSMUSG00000036036.16	ENSMUST00000172540.2	815	3	-1967	-897	1	-20	multi-exon	FALSE	canonical	3	474	junction_1	1432.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAGGGGAGGTCAAA	NA	False	NA	16	True	AATAAA	-21	NA	37313446	37321504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37315796_37316950_37317087_37320310
ES.15179.27	chr17	+	2196	4	FSM	ENSMUSG00000036036.16	ENSMUST00000174524.8	1747	4	-482	33	2	-30	multi-exon	FALSE	canonical	3	603	junction_1	1178.31216388339	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313447	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.28	chr17	+	3120	4	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	3	-31	intron_retention	FALSE	canonical	0	0	junction_1	1475.04508405676	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACTAAAAGAAGGGGAG	NA	False	NA	5	True	AATAAA	-10	NA	37313448	37321493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37315796_37316950_37317087_37320310
ES.15179.29	chr17	+	1636	4	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	6	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1574.01969492125	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313451	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313652_37315686_37315796_37316943_37317087_37320310
ES.15179.3	chr17	+	1776	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-35	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAGGTCAAACTGAGGT	NA	False	NA	23	True	AATAAA	-28	NA	37313338	37321511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.30	chr17	+	1765	6	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	6	-30	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1431.58270456163	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313451	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313670_37314177_37314208_37315365_37315447_37315688_37315796_37316941_37317087_37320310
ES.15179.31	chr17	+	1864	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-7	-30	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	1404.99544038406	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313453	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313852_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.32	chr17	+	3154	4	NIC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	-7	-30	intron_retention	FALSE	canonical	3	426	junction_1	1362.02863406024	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313453	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37313670_37314177_37315796_37316950_37317087_37320310
ES.15179.33	chr17	+	1782	5	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	-5	116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1309.76543701535	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTGTATTATTAATT	NA	False	NA	NA	False	AAAAAG	-13	NA	37313455	37321643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ES.15179.35	chr17	+	1618	5	NIC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	1403.50810471475	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGGAGGGGAGGT	NA	False	NA	12	True	AATAAA	-17	NA	37313505	37321500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37313652_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.37	chr17	+	2589	1	NIC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	3411	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37318905	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37318900_37321500
ES.15179.38	chr17	+	2584	1	Genic_Genomic	ENSMUSG00000036036.16	novel	NA	NA	NA	NA	5641	2192	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTCTTTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	37321135	37323719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_37321100_37323700
ES.15179.39	chr17	+	3164	1	Genic_Genomic	ENSMUSG00000036036.16	novel	NA	NA	NA	NA	5872	3003	mono-exon	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTGATGTCCATATA	NA	False	NA	NA	False	AATAAA	-16	NA	37321366	37324530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_37321400_37324500
ES.15179.4	chr17	+	1852	6	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-33	-30	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	1432.86049565197	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313340	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313670_37314177_37314208_37315389_37315447_37315688_37315796_37316941_37317087_37320310
ES.15179.40	chr17	+	4477	1	Antisense	novelGene_ENSMUSG00000076439.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATAGTGATTGGTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	37321717	37326194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37321700_37326200
ES.15179.5	chr17	+	3817	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	-1217	-3	-33	0	multi-exon	FALSE	canonical	3	2767	junction_1	286	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTATTTGTTTTT	NA	False	NA	39	True	AATAAA	-44	NA	37313340	37321527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37315796_37316941_37317087_37320310
ES.15179.6	chr17	+	1900	5	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	-25	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1406.78256582174	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTATTATTAATTAG	NA	False	NA	NA	False	AAAAAG	-15	NA	37313348	37321645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313632_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ES.15179.8	chr17	+	1842	6	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	16	-31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1493.55851576026	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACTAAAAGAAGGGGAG	NA	False	NA	5	True	AATAAA	-10	NA	37313389	37321493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313670_37314161_37314208_37315365_37315447_37315688_37315796_37316941_37317087_37320310
ES.15179.9	chr17	+	1546	5	NNC	ENSMUSG00000036036.16	novel	1991	6	NA	NA	8	-30	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1309.76543701535	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAGAAGGGGAGG	NA	False	NA	6	True	AATAAA	-11	NA	37313424	37321494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37313514_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ES.1518.1	chr1	-	4250	22	NIC	ENSMUSG00000026365.16	novel	4361	22	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	2.84760312147163	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGCCTATGTACGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	140111035	140013596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_140014261_140016395_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036682_140040170_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ES.1518.3	chr1	-	1427	7	ISM	ENSMUSG00000026365.16	ENSMUST00000123238.2	4300	22	25	57664	-17	1676	5prime_fragment	FALSE	canonical	1	1	junction_2	3.36650164612069	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAAACCTTTGTTGTCC	NA	False	NA	NA	False	AGTAAA	-20	NA	140111035	140071280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ES.1518.4	chr1	-	617	3	ISM	ENSMUSG00000026365.16	ENSMUST00000148225.2	3415	6	47	17202	-42	-17202	5prime_fragment	FALSE	canonical	3	9	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTATTTGGATATC	NA	False	NA	NA	False	AATAAA	-12	NA	140111102	140090158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_140090390_140090688_140090875_140110902
ES.15180.14	chr17	-	2959	4	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-17	1843	intron_retention	FALSE	canonical	2	3	junction_3	70.4099109185316	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37292146	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280614_37281212_37281462_37281732_37281958_37292031
ES.15180.17	chr17	-	2220	10	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	282	1843	multi-exon	FALSE	canonical	2	2	junction_2	87.5875576033125	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299655	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37278969_37279207_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
ES.15180.18	chr17	-	2516	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	102	1843	intron_retention	FALSE	canonical	3	12	junction_1	88.2866389225737	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37300294	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
ES.15180.19	chr17	-	2015	7	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	-10322	1843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.8531300894656	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37292610	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37292517
ES.15180.20	chr17	-	2798	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	274	1843	multi-exon	FALSE	canonical	2	8	junction_5	87.9103769472069	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299663	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37289542_37289826_37298307_37298416_37298546_37298823_37299396
ES.15180.22	chr17	-	2979	4	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-9	1843	intron_retention	FALSE	canonical	3	20	junction_3	62.4179461373089	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37292118	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280614_37281212_37281462_37281732_37282006_37292031
ES.15180.23	chr17	-	3076	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	124	1843	intron_retention	FALSE	canonical	3	13	junction_5	79.6415438712992	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37300272	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
ES.15180.25	chr17	-	1961	6	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	1	1843	multi-exon	FALSE	canonical	3	20	junction_5	56.5954061739997	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37292128	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37292031
ES.15180.26	chr17	-	3306	7	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	274	1843	multi-exon	FALSE	canonical	3	36	junction_4	70.2558815252423	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299663	37278243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
ES.15180.28	chr17	-	3603	6	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	-1871	1842	intron_retention	FALSE	non_canonical	0	0	junction_3	68.1339856459315	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGGTATTGATTG	NA	False	NA	-3	True	NA	NA	NA	37284159	37278244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37278611_37279355_37279529_37280098_37280210_37280336_37280614_37281212_37281462_37281732
ES.15180.29	chr17	-	3054	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	2	1842	intron_retention	FALSE	non_canonical	0	0	junction_4	78.7317439156532	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGGTATTGATTG	NA	False	NA	-3	True	NA	NA	NA	37299935	37278244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37278969_37279193_37279355_37279529_37280098_37280210_37280336_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546
ES.15180.3	chr17	-	2232	5	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	248	1844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.2226954364813	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37282040	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37279529_37280098_37280210_37280335_37280614_37281212_37281462_37281732
ES.15180.30	chr17	-	3714	2	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	10	1842	intron_retention	FALSE	canonical	3	16	junction_1	0	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGGTATTGATTG	NA	False	NA	-3	True	NA	NA	NA	37292099	37278244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37281891_37292031
ES.15180.31	chr17	-	3656	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	272	1841	multi-exon	FALSE	canonical	0	0	junction_4	91.5913729116271	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGTTGGGTATTGATT	NA	False	NA	-4	True	NA	NA	NA	37299665	37278245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37289542_37289826_37298307_37298416_37298546_37298823_37299396
ES.15180.33	chr17	-	2981	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	434	1841	multi-exon	FALSE	canonical	3	31	junction_1	79.8442361151782	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGTTGGGTATTGATT	NA	False	NA	-4	True	NA	NA	NA	37299503	37278245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
ES.15180.34	chr17	-	3947	1	Genic_Genomic	ENSMUSG00000083534.2	novel	NA	NA	NA	NA	96	1841	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGTTGGGTATTGATT	NA	False	NA	-4	True	NA	NA	NA	37282192	37278245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_37278200_37282200
ES.15180.35	chr17	-	4173	7	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-131	1841	intron_retention	FALSE	canonical	0	0	junction_6	65.5328585944147	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGTTGGGTATTGATT	NA	False	NA	-4	True	NA	NA	NA	37292260	37278245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37278969_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37289542
ES.15180.36	chr17	-	3670	10	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-79	1840	intron_retention	FALSE	canonical	1	1	junction_5	91.0701805080992	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGTTGGGTATTGAT	NA	False	NA	-5	True	NA	NA	NA	37300508	37278246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37289360_37289439_37289542_37289826_37298307_37298416_37298546_37298823_37299396
ES.15180.37	chr17	-	2735	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	282	1836	multi-exon	FALSE	canonical	0	0	junction_5	89.2999685050336	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37299655	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37289542_37289826_37298307_37298416_37298546_37298823_37299396
ES.15180.39	chr17	-	2006	7	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	7	1836	multi-exon	FALSE	canonical	3	16	junction_6	60.2430263368485	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37292122	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37292031
ES.15180.4	chr17	-	4177	2	ISM	ENSMUSG00000083534.2	ENSMUST00000119193.2	1034	5	-253	-1844	-253	1844	intron_retention	FALSE	canonical	3	153	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37282541	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_37280210_37280331
ES.15180.40	chr17	-	3449	4	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-9	1836	intron_retention	FALSE	canonical	3	20	junction_3	61.1137373173077	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37292118	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280210_37280331_37281462_37281732_37282006_37292031
ES.15180.41	chr17	-	1376	6	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	105	1836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.8899158436008	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37282183	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37278611_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37282034
ES.15180.42	chr17	-	3300	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	114	1836	intron_retention	FALSE	canonical	3	28	junction_6	81.4569479848097	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37300282	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
ES.15180.43	chr17	-	2479	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	1199	1836	multi-exon	FALSE	canonical	0	0	junction_6	83.8867353936247	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37298738	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37289360_37289439_37289533_37289826_37298307_37298416_37298546
ES.15180.44	chr17	-	3347	6	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	463	1836	intron_retention	FALSE	canonical	3	28	junction_3	79.5094962881793	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37299474	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
ES.15180.45	chr17	-	2520	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	60	1836	multi-exon	FALSE	canonical	3	8	junction_8	87.2431050284204	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37299877	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396_37299673_37299826
ES.15180.46	chr17	-	3255	5	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-9	1836	intron_retention	FALSE	canonical	2	8	junction_3	70.1854685814664	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCATGTTGGGTAT	NA	False	NA	-9	True	NA	NA	NA	37292118	37278250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280614_37281212_37281462_37281732_37282006_37289542_37289826_37292031
ES.15180.48	chr17	-	1939	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	434	1834	multi-exon	FALSE	canonical	3	13	junction_6	85.4063814945932	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGGCTCATGTTGGGT	NA	False	NA	-11	True	NA	NA	NA	37299503	37278252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37278969_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
ES.15180.5	chr17	-	3464	3	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-9	1844	intron_retention	FALSE	canonical	3	16	junction_2	65	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37292118	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37281462_37281732_37281891_37292031
ES.15180.51	chr17	-	1770	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	312	1078	multi-exon	FALSE	canonical	3	31	junction_1	80.2090043261977	340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37299625	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
ES.15180.52	chr17	-	2951	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-27	1078	intron_retention	FALSE	canonical	3	15	junction_8	74.735261925011	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37300456	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37300097_37300320
ES.15180.53	chr17	-	1660	7	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	438	1078	intron_retention	FALSE	canonical	3	13	junction_4	85.9554147993792	340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37299499	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
ES.15180.54	chr17	-	1545	8	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-7	1078	multi-exon	FALSE	canonical	1	3	junction_5	65.9084089274422	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37292116	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37289360_37289439_37289542_37289826_37292031
ES.15180.56	chr17	-	2109	10	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-189	1078	multi-exon	FALSE	canonical	2	4	junction_8	77.1359230014392	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37300618	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299826_37300097_37300320
ES.15180.57	chr17	-	2313	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	122	1078	intron_retention	FALSE	canonical	3	13	junction_5	79.6415438712992	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37300274	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
ES.15180.58	chr17	-	1575	2	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	1137	1078	intron_retention	TRUE	canonical	0	0	junction_1	0	340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37298800	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280500_37298716
ES.15180.6	chr17	-	3491	9	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-151	1844	intron_retention	FALSE	canonical	3	31	junction_1	80.2090043261977	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37300580	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
ES.15180.60	chr17	-	1237	6	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	-40	1078	multi-exon	FALSE	canonical	3	20	junction_5	56.5954061739997	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37292169	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37292031
ES.15180.61	chr17	-	3323	2	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	-314	1078	intron_retention	FALSE	canonical	3	146	junction_1	0	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37282602	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37281462_37281732
ES.15180.62	chr17	-	1153	6	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	10	1078	multi-exon	FALSE	canonical	2	3	junction_5	72.5297180471564	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37292119	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279207_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37292031
ES.15180.63	chr17	-	3415	7	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	7	1078	intron_retention	FALSE	canonical	3	28	junction_4	72.6934201515745	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTGGATT	NA	False	NA	NA	False	NA	NA	NA	37300422	37279008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
ES.15180.64	chr17	-	1074	6	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	7	1077	multi-exon	FALSE	canonical	3	16	junction_5	57.8397786994383	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAATTTGGAT	NA	False	NA	NA	False	NA	NA	NA	37292122	37279009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37292031
ES.15180.67	chr17	-	2025	5	NNC	ENSMUSG00000083534.2	novel	1034	5	NA	NA	96	1074	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	52.7114788257738	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	37282192	37279012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37279193_37279355_37280210_37280331_37280614_37281212_37281462_37281732
ES.15180.69	chr17	-	3241	4	Fusion	ENSMUSG00000024459.19_ENSMUSG00000064308.11	novel	414	3	NA	NA	91	715	intron_retention	FALSE	canonical	2	9	junction_1	110.713845365228	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTTGACTTAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	37300305	37287877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37289826_37298307_37298416_37298546_37298823_37299396
ES.15180.7	chr17	-	4496	6	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	118	1844	intron_retention	FALSE	canonical	3	36	junction_4	63.8636046586786	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37300278	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546
ES.15180.70	chr17	-	1550	7	Fusion	ENSMUSG00000064308.11_ENSMUSG00000024459.19	novel	865	4	NA	NA	6	26	multi-exon	FALSE	canonical	2	4	junction_5	84.4013230544008	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTCTATACGTTGG	NA	False	NA	6	True	TATAAA	-20	NA	37300423	37288566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37288999_37289360_37289439_37289542_37289826_37298307_37298416_37298546_37298823_37299826_37300097_37300320
ES.15180.71	chr17	-	3408	3	ISM	ENSMUSG00000064308.11	ENSMUST00000039846.12	865	4	-345	8	-345	-8	intron_retention	FALSE	canonical	3	6	junction_1	4.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCCCATATAAAATTTT	NA	False	NA	-28	True	ATTAAA	-21	NA	37292474	37288600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_37288999_37289360_37289439_37289542
ES.15180.72	chr17	-	849	4	FSM	ENSMUSG00000064308.11	ENSMUST00000039846.12	865	4	8	8	8	-8	multi-exon	FALSE	canonical	3	6	junction_1	4.49691252107735	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCCCATATAAAATTTT	NA	False	NA	-28	True	ATTAAA	-21	NA	37292121	37288600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37288999_37289360_37289439_37289542_37289826_37292031
ES.15180.73	chr17	-	2804	3	NNC	ENSMUSG00000064308.11	novel	724	4	NA	NA	261	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATGTCCCATATAAAAT	NA	False	NA	-31	True	ATTAAA	-18	NA	37291848	37288603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37288999_37289344_37289439_37289533
ES.15180.74	chr17	-	2242	4	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	96	342	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	95.5033449094265	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGTAGGCCGTTAGAG	NA	False	NA	59	True	NA	NA	NA	37300300	37294610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299826
ES.15180.75	chr17	-	3961	8	NNC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	-13629	342	intron_retention	FALSE	canonical	0	0	junction_4	108.622356476605	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGTAGGCCGTTAGAG	NA	False	NA	59	True	NA	NA	NA	37314058	37294610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37300569_37305202_37305395_37306686_37306744_37306924_37307096_37313457
ES.15180.76	chr17	-	2551	5	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	7	323	intron_retention	FALSE	canonical	3	15	junction_4	93.890894127173	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCCAAAAAACCCAAAAAAC	NA	False	NA	40	True	NA	NA	NA	37300422	37294629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37300097_37300320
ES.15180.77	chr17	-	2072	5	NNC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	305	272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	99.7158462833265	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGTTAAGTGAGAC	NA	False	NA	-11	True	NA	NA	NA	37299632	37294680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299141_37299280_37299396
ES.15180.78	chr17	-	2085	5	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	0	272	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	96.6394717493841	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGTTAAGTGAGAC	NA	False	NA	-11	True	NA	NA	NA	37299937	37294680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37299673_37299826
ES.15180.8	chr17	-	3275	8	Fusion	ENSMUSG00000024459.19_ENSMUSG00000083534.2	novel	1034	5	NA	NA	7	1844	intron_retention	FALSE	canonical	3	28	junction_5	76.1799695136592	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37300422	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
ES.15180.80	chr17	-	2534	5	NNC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	7	272	intron_retention	FALSE	canonical	0	0	junction_4	99.80073897522	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGTTAAGTGAGAC	NA	False	NA	-11	True	NA	NA	NA	37300422	37294680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37299637_37299826
ES.15180.82	chr17	-	1695	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	766	-2	274	2	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTTTTTAATACGGT	NA	False	NA	NA	False	CATAAA	-16	NA	37299663	37294950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
ES.15180.83	chr17	-	1906	5	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	3	-396	intron_retention	FALSE	canonical	3	8	junction_4	96.6394717493841	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGCTGTTTGGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	37300426	37295348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37299673_37299826
ES.15180.84	chr17	-	1932	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	7	520	7	-520	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACCAAGGAAAGCAATAT	NA	False	NA	NA	False	AATAAA	-25	NA	37300422	37295472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
ES.15180.85	chr17	-	1498	6	NNC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	-4510	-526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.9660992144039	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGATTACCAAGGAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	37304939	37295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299826_37300097_37300320_37300457_37304747
ES.15180.86	chr17	-	1499	3	ISM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	1001	2272	509	522	5prime_fragment	FALSE	canonical	3	236	junction_1	7.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTAGTATCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-18	NA	37299428	37297224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_37298416_37298546_37298823_37299396
ES.15180.87	chr17	-	2242	5	NNC	ENSMUSG00000024459.19	novel	982	5	NA	NA	101	414	intron_retention	FALSE	canonical	1	1	junction_3	100.491293155178	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATCACATATACTATTC	NA	False	NA	NA	False	AATAAA	-25	NA	37300295	37297332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37298416_37298546_37298823_37299141_37299280_37299396_37299673_37299826
ES.15180.88	chr17	-	1573	2	NIC	ENSMUSG00000024459.19	novel	982	5	NA	NA	449	405	intron_retention	FALSE	canonical	3	251	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCCTCCATTATCACAT	NA	False	NA	NA	False	AATAAA	-16	NA	37299488	37297341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_37298823_37299396
ES.15180.89	chr17	-	3315	4	NNC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	-9112	-1731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTGTGTCTTCCGTCGC	NA	False	NA	NA	False	NA	NA	NA	37309541	37300119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_37300569_37305202_37305395_37306686_37306744_37306924
ES.15180.9	chr17	-	1429	7	Fusion	ENSMUSG00000064308.11_ENSMUSG00000083534.2	novel	1034	5	NA	NA	10	1844	multi-exon	FALSE	canonical	1	2	junction_1	65.9437891945355	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37292119	37278242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_37278611_37279355_37279529_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37292031
ES.15181.1	chr17	-	2166	3	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_37315794_37316939_37317086_37320309
ES.15181.2	chr17	-	6536	1	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_37314600_37321100
ES.15181.3	chr17	-	2155	3	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_37315793_37316947_37317095_37320320
ES.15181.4	chr17	-	3312	2	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_37317086_37320309
ES.15181.7	chr17	-	2156	3	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCAAACAGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	37321091	37314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_37315793_37316947_37317081_37320305
ES.15182.1	chr17	-	1828	3	ISM	ENSMUSG00000076439.13	ENSMUST00000167275.3	627	7	5622	1550	5622	-1550	internal_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAATGTCTAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	37328469	37323945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_37325663_37325959_37325981_37328379
ES.15183.1	chr17	+	169	1	Intergenic	novelGene_12657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCCAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	37336992	37337161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37337000_37337200
ES.15184.1	chr17	+	209	1	Intergenic	novelGene_12658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTTCAGCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	37338675	37338884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37338700_37338900
ES.15185.1	chr17	-	160	1	Intergenic	novelGene_12659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37346104	37345944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37345900_37346100
ES.15186.1	chr17	-	1370	1	Intergenic	novelGene_12660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACAAGCTTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	37356788	37355418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37355400_37356800
ES.15187.1	chr17	+	5540	21	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-36	0	intron_retention	FALSE	canonical	3	7	junction_4	22.7834918307094	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37356821	37385196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.10	chr17	+	4244	21	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	23.5424616384948	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37356926	37385196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.11	chr17	+	4188	21	FSM	ENSMUSG00000024462.18	ENSMUST00000173823.8	4204	21	15	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_3	26.3200968843202	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCAGCACCTCATCCA	NA	False	NA	25	True	AATAAA	-13	NA	37356926	37385181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.12	chr17	+	1181	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	20	394	20	-394	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCGGTGAGATATGG	NA	False	NA	5	True	ATTAAA	-18	NA	37356939	37359965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
ES.15187.13	chr17	+	5439	21	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	68	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	26.6763472012193	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCAGCACCTCATCCA	NA	False	NA	25	True	AATAAA	-13	NA	37356987	37385181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357107_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.14	chr17	+	4328	22	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	73	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.175430347795	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTGTCCTGTGAACT	NA	False	NA	39	True	AATAAA	-27	NA	37356992	37385195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378105_37378257_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.15	chr17	+	4309	22	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	79	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.5817403997697	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATCCACTGTCCTGTG	NA	False	NA	35	True	AATAAA	-23	NA	37356998	37385191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378105_37378257_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382865_37383035_37383180_37383744
ES.15187.16	chr17	+	5396	21	NNC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	-41	-7	intron_retention	FALSE	canonical	1	1	junction_4	23.5424616384948	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTCATCCACTGTCCTG	NA	False	NA	33	True	AATAAA	-21	NA	37357049	37385189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359435_37360544_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.17	chr17	+	4082	21	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.1580558950747	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGCACCTCATCCACT	NA	False	NA	27	True	AATAAA	-15	NA	37357053	37385183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37361902_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378677_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.18	chr17	+	1535	3	FSM	ENSMUSG00000024462.18	ENSMUST00000172789.2	1460	3	-75	0	-75	0	multi-exon	FALSE	canonical	3	67	junction_1	4.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGTAATTTGTCT	NA	False	NA	16	True	NA	NA	NA	37357384	37360359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37357669_37358345_37358550_37359312
ES.15187.19	chr17	+	6534	19	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-25	1	intron_retention	FALSE	canonical	3	39	junction_6	19.2332177928361	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTCCTGTGAACTGA	NA	False	NA	41	True	AATAAA	-29	NA	37357434	37385197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.2	chr17	+	1681	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	-92	6	-30	-6	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTGTTTTGTAAT	NA	False	NA	10	True	NA	NA	NA	37356827	37360353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
ES.15187.20	chr17	+	4249	21	NIC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	25.9173686936001	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37357457	37385182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.21	chr17	+	3946	22	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.8519561581127	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCACCTCATCCACTG	NA	False	NA	28	True	AATAAA	-16	NA	37357458	37385184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357502_37357586_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367709_37367782_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.22	chr17	+	6412	20	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-1	2	intron_retention	FALSE	canonical	1	5	junction_1	23.2612526011859	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCACCTCATCCACTG	NA	False	NA	28	True	AATAAA	-16	NA	37357458	37385184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357502_37357586_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.23	chr17	+	4158	25	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	0	7620	intron_retention	FALSE	canonical	0	0	junction_21	33.321560420978	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTTGTGTCTTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	37357459	37393579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357502_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37388539_37388679_37389340_37389508_37390943_37391115_37391262_37391417_37393329
ES.15187.24	chr17	+	4088	20	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.5610629034087	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37357463	37385182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357669_37358345_37358550_37359312_37359499_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378677_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.25	chr17	+	5435	20	NIC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	13	0	intron_retention	FALSE	canonical	2	4	junction_3	23.394485227467	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37357472	37385182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357669_37358345_37358550_37359312_37359499_37360544_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.26	chr17	+	5881	18	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	23	917	intron_retention	FALSE	canonical	3	39	junction_6	19.3923253824038	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGGTTATCTGGGTC	NA	False	NA	0	True	AATACA	-13	NA	37357482	37384039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.28	chr17	+	3958	17	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	824	918	intron_retention	FALSE	canonical	3	39	junction_4	20.2623419179521	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGTTATCTGGGTCT	NA	False	NA	1	True	AATACA	-14	NA	37360293	37384040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.29	chr17	+	5711	17	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	967	-23	intron_retention	FALSE	canonical	3	39	junction_4	20.2623419179521	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACCCATAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	37360436	37385936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.3	chr17	+	4439	22	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	25.5127907985596	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACTGTCCTGTGAAC	NA	False	NA	38	True	AATAAA	-26	NA	37356874	37385194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.30	chr17	+	4760	16	NIC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	-970	2	intron_retention	FALSE	canonical	3	7	junction_1	23.4179418395383	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCACCTCATCCACTG	NA	False	NA	28	True	AATAAA	-16	NA	37360552	37385184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035
ES.15187.31	chr17	+	5379	16	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-961	2	intron_retention	FALSE	canonical	0	0	junction_14	25.5459498855602	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCACCTCATCCACTG	NA	False	NA	28	True	AATAAA	-16	NA	37360561	37385184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383043_37383180_37383744
ES.15187.32	chr17	+	4839	17	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-921	-7	intron_retention	FALSE	canonical	1	2	junction_7	25.3900048001177	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTGACTCAGCACCT	NA	False	NA	19	True	AATAAA	-7	NA	37360601	37385175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373723_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.33	chr17	+	4434	16	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-713	-703	intron_retention	FALSE	canonical	3	39	junction_4	20.5279213647061	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCACTTGTGTTTGCATA	NA	False	NA	NA	False	NA	NA	NA	37360809	37384479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.34	chr17	+	6822	15	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-504	916	intron_retention	FALSE	canonical	3	39	junction_4	21.2080317862101	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGGTTATCTGGGT	NA	False	NA	-1	True	AATACA	-12	NA	37361018	37384038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.35	chr17	+	4019	18	FSM	ENSMUSG00000024462.18	ENSMUST00000172792.8	4036	18	14	3	14	-3	multi-exon	FALSE	canonical	3	3	junction_9	27.5216178006814	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCACTGTCCTGTGAA	NA	False	NA	37	True	AATAAA	-25	NA	37361536	37385193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378105_37378257_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.36	chr17	+	4202	17	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	248	-2	intron_retention	FALSE	canonical	1	1	junction_2	28.894676737247	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACTGTCCTGTGAAC	NA	False	NA	38	True	AATAAA	-26	NA	37361813	37385194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37362052_37362498_37362556_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.37	chr17	+	4699	15	NIC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	253	6	intron_retention	FALSE	canonical	3	39	junction_4	19.0894778154172	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTCATCCACTGTCCT	NA	False	NA	32	True	AATAAA	-20	NA	37361818	37385188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035
ES.15187.38	chr17	+	3564	18	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	330	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6089249751768	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37361895	37385196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37362047_37362498_37362556_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.39	chr17	+	1267	7	ISM	ENSMUSG00000024462.18	ENSMUST00000172792.8	4036	18	408	11291	365	-1844	5prime_fragment	FALSE	canonical	3	39	junction_4	4.59770474137791	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCATCTCCTCATTCC	NA	False	NA	NA	False	AAAAAG	-12	NA	37361930	37373905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425
ES.15187.4	chr17	+	6668	20	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-16	1	intron_retention	FALSE	canonical	3	39	junction_7	19.3446650651283	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTCCTGTGAACTGA	NA	False	NA	41	True	AATAAA	-29	NA	37356895	37385197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.40	chr17	+	3561	18	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	368	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.8711491388056	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCACTGTCCTGTGAAC	NA	False	NA	38	True	AATAAA	-26	NA	37361933	37385194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37372356_37372446_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.41	chr17	+	3207	15	ISM	ENSMUSG00000024462.18	ENSMUST00000173823.8	4204	21	8716	1	-976	-1	3prime_fragment	FALSE	canonical	3	39	junction_2	19.2137546395008	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCAGCACCTCATCCA	NA	False	NA	25	True	AATAAA	-13	NA	37365627	37385181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.42	chr17	+	2378	9	ISM	ENSMUSG00000024462.18	ENSMUST00000173823.8	4204	21	18639	-8	1675	-6	3prime_fragment	FALSE	canonical	3	64	junction_5	12.7082650271388	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCATCCACTGTCCTGT	NA	False	NA	34	True	AATAAA	-22	NA	37375550	37385190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.43	chr17	+	5200	7	NIC	ENSMUSG00000024462.18	novel	4204	21	NA	NA	2045	0	intron_retention	FALSE	canonical	3	64	junction_4	13.6869767784319	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37375920	37385182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37383180_37383744
ES.15187.44	chr17	+	2443	9	ISM	ENSMUSG00000024462.18	ENSMUST00000172792.8	4036	18	16582	14	-3231	0	3prime_fragment	FALSE	canonical	3	9	junction_1	27.58594524391	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGCACCTCATCCAC	NA	False	NA	26	True	AATAAA	-14	NA	37378104	37385182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_37378257_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.45	chr17	+	1859	5	NNC	ENSMUSG00000024462.18	novel	4036	18	NA	NA	-415	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.9081151789548	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTCCTGTGAACTGAG	NA	False	NA	42	True	AATAAA	-30	NA	37380920	37385198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37380969_37381545_37381674_37382788_37382874_37383035_37383180_37383744
ES.15187.46	chr17	+	3518	2	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	4017	3573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAGACCCAGCAGAAT	NA	False	NA	NA	False	NA	NA	NA	37385352	37389532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37388679_37389340
ES.15187.47	chr17	+	2508	1	Intergenic	novelGene_12661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGAAGGATTAACAATGA	NA	False	NA	26	True	NA	NA	NA	37389558	37392066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37389600_37392100
ES.15187.5	chr17	+	6719	21	NNC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-10	1	intron_retention	FALSE	canonical	1	1	junction_5	26.431799030713	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTCCTGTGAACTGA	NA	False	NA	41	True	AATAAA	-29	NA	37356901	37385197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37362052_37362498_37362556_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.6	chr17	+	4960	21	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-3	0	intron_retention	FALSE	canonical	2	4	junction_4	26.0622332120638	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37356908	37385196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.7	chr17	+	5596	21	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-3	2	intron_retention	FALSE	canonical	2	4	junction_4	23.1568564360537	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCACCTCATCCACTG	NA	False	NA	28	True	AATAAA	-16	NA	37356908	37385184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.8	chr17	+	6125	19	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-3	992	intron_retention	FALSE	canonical	3	39	junction_7	19.5540561293843	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCACAGTTTTGTTTGA	NA	False	NA	75	True	NA	NA	NA	37356908	37384114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15187.9	chr17	+	7208	19	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	-3	1	intron_retention	FALSE	canonical	3	39	junction_7	19.5540561293843	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTCCTGTGAACTGA	NA	False	NA	41	True	AATAAA	-29	NA	37356908	37385197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
ES.15188.1	chr17	+	4822	1	Antisense	novelGene_ENSMUSG00000056600.5_AS_novelGene_ENSMUSG00000095377.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAAATATTGATGAGGA	NA	False	NA	NA	False	AATAAA	-15	NA	37397294	37402116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_37397300_37402100
ES.15189.1	chr17	-	178	1	Intergenic	novelGene_12662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	37400601	37400423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37400400_37400600
ES.1519.1	chr1	+	1711	3	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGGAAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	140149833	140156100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_140150029_140152666_140152854_140154771
ES.15190.1	chr17	+	206	1	Intergenic	novelGene_12663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCCTATTGATCCCT	NA	False	NA	NA	False	NA	NA	NA	37446487	37446693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_37446500_37446700
ES.15191.1	chr17	-	158	1	Intergenic	novelGene_12664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	9859	False	NA	NA	False	NA	NA	NA	37473389	37473231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_37473200_37473400
ES.15192.1	chr17	+	1423	8	FSM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	15	0	15	0	multi-exon	FALSE	canonical	2	2	junction_3	3.09047252182628	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCCCATGTGTTCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	37581125	37585375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_37581226_37581412_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ES.15192.2	chr17	+	2837	1	Genic_Genomic	ENSMUSG00000016206.7	novel	NA	NA	NA	NA	1430	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCCATGTGTTCAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	37582540	37585377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_37582500_37585400
ES.15193.1	chr17	+	6960	1	Intergenic	novelGene_12665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	38264949	38271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_38264900_38271900
ES.15194.1	chr17	+	465	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13789	-1063	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCTCTACAAATACATAA	NA	False	NA	NA	False	NA	NA	NA	38306748	38322224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
ES.15194.10	chr17	+	3733	1	Intergenic	novelGene_12670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGAGTTGTCTGGTG	NA	False	NA	3	True	NA	NA	NA	38323872	38327605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_38323900_38327600
ES.15194.2	chr17	+	1728	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13789	200	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCCTCCTCCTATAT	NA	False	NA	1	True	NA	NA	NA	38306748	38323487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
ES.15194.3	chr17	+	2863	3	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13784	200	intron_retention	FALSE	canonical	3	27	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCCTCCTCCTATAT	NA	False	NA	1	True	NA	NA	NA	38306753	38323487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38306872_38320538_38320666_38320869
ES.15194.4	chr17	+	615	5	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13778	200	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCCTCCTCCTATAT	NA	False	NA	1	True	NA	NA	NA	38306759	38323487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38307035_38320538_38320666_38320869_38320931_38322070_38322164_38323428
ES.15194.5	chr17	+	888	1	Intergenic	novelGene_12666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	38306772	38307660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_38306800_38307700
ES.15194.6	chr17	+	4014	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13763	2512	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.4142135623731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTAGTCAATGTGAT	NA	False	NA	19	True	NA	NA	NA	38306774	38325799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38306872_38320538_38320666_38320869_38320931_38322070
ES.15194.7	chr17	+	727	4	NNC	ENSMUSG00000092390.2	novel	1406	3	NA	NA	-13758	-933	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7279220613579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTAGCCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	38306779	38322354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_38307035_38320538_38320666_38320869_38320931_38322070
ES.15194.8	chr17	+	2857	3	FSM	ENSMUSG00000092390.2	ENSMUST00000173035.2	1406	3	-769	-682	-769	682	multi-exon	FALSE	canonical	3	27	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	38319768	38323969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_38320666_38320869_38320931_38322070
ES.15194.9	chr17	+	3731	1	Genic_Genomic	ENSMUSG00000092390.2	novel	NA	NA	NA	NA	1531	2512	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTAGTCAATGTGAT	NA	False	NA	19	True	NA	NA	NA	38322068	38325799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_38322100_38325800
ES.15195.1	chr17	-	5369	1	Intergenic	novelGene_12667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAACCTGGGGTTGGAAG	NA	False	NA	NA	False	NA	NA	NA	38313571	38308202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_38308200_38313600
ES.15195.2	chr17	-	4072	1	Intergenic	novelGene_12668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTGCACAGAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	38313571	38309499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_38309500_38313600
ES.15195.3	chr17	-	156	1	Intergenic	novelGene_12669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	38313026	38312870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_38312900_38313000
ES.15196.1	chr17	+	178	1	Intergenic	novelGene_12671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTTTTTTTATTATT	6542	False	NA	NA	False	NA	NA	NA	39113516	39113694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_39113500_39113700
ES.15197.1	chr17	+	4300	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3357	906	-3357	-906	mono-exon	FALSE	NA	NA	NA	NA	NA	872	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGTATTGCGCCGCTAG	NA	False	NA	-52	True	NA	NA	NA	40153886	40158186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40158200
ES.15197.10	chr17	+	4435	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	770	-3356	-770	mono-exon	FALSE	NA	NA	NA	NA	NA	891	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACCATAAACGATGCCG	NA	False	NA	-78	True	NA	NA	NA	40153887	40158322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40158300
ES.15197.11	chr17	+	4779	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	426	-3356	-426	mono-exon	FALSE	NA	NA	NA	NA	NA	975	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGCGGTCGGCGTCCCC	NA	False	NA	NA	False	NA	NA	NA	40153887	40158666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40158700
ES.15197.12	chr17	+	3910	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	1295	-3356	-1295	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTAATTGGAATGAGTC	NA	False	NA	NA	False	NA	NA	NA	40153887	40157797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40157800
ES.15197.13	chr17	+	1642	1	Intergenic	novelGene_12677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCCTCCTCGGGCTCCCG	NA	False	NA	NA	False	NA	NA	NA	40153889	40155531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40155500
ES.15197.14	chr17	+	3590	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3354	1613	-3354	-1613	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAACCCGGTGAGCTC	NA	False	NA	4	True	NA	NA	NA	40153889	40157479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40157500
ES.15197.15	chr17	+	541	1	Intergenic	novelGene_12675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCCTTCTTCGTCGGGTG	NA	False	NA	NA	False	NA	NA	NA	40153889	40154430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40154400
ES.15197.16	chr17	+	1942	1	Intergenic	novelGene_12678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCGTGCTGTCGGACC	NA	False	NA	NA	False	NA	NA	NA	40153889	40155831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40155800
ES.15197.18	chr17	+	5255	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3354	-52	-3354	52	mono-exon	FALSE	NA	NA	NA	NA	NA	1025	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCGCCGGGAGGCGCG	NA	False	NA	32	True	NA	NA	NA	40153889	40159144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40159100
ES.15197.2	chr17	+	1263	1	Intergenic	novelGene_12674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTCACCCGTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	40153887	40155150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40155200
ES.15197.20	chr17	+	1478	1	Intergenic	novelGene_12676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGCGTTGATTGATC	NA	False	NA	NA	False	NA	NA	NA	40153889	40155367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40155400
ES.15197.21	chr17	+	5888	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3344	-695	-3344	695	mono-exon	FALSE	NA	NA	NA	NA	NA	1069	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGCTGGTGAGATG	NA	False	NA	NA	False	NA	NA	NA	40153899	40159787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40159800
ES.15197.23	chr17	+	2639	1	Intergenic	novelGene_12679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCGCCGCGGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	40153996	40156635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40154000_40156600
ES.15197.27	chr17	+	4726	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-2328	-549	-2328	549	mono-exon	FALSE	NA	NA	NA	NA	NA	1044	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGGGGGGTCGCCCTGCC	NA	False	NA	NA	False	TTTAAA	-4	NA	40154915	40159641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40154900_40159600
ES.15197.28	chr17	+	2533	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-2109	1425	-2109	-1425	mono-exon	FALSE	NA	NA	NA	NA	NA	670	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTCGATTCCGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	40155134	40157667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40155100_40157700
ES.15197.29	chr17	+	1781	1	Intergenic	novelGene_12680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCCCCGACGGCTTCG	NA	False	NA	16	True	NA	NA	NA	40155430	40157211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40155400_40157200
ES.15197.3	chr17	+	1028	1	Intergenic	novelGene_12673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACGGCCAGCGCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	40153887	40154915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40154900
ES.15197.30	chr17	+	3463	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-1174	-440	-1174	440	mono-exon	FALSE	NA	NA	NA	NA	NA	1013	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTGTGGGTTCGCCCGTC	NA	False	NA	NA	False	NA	NA	NA	40156069	40159532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40156100_40159500
ES.15197.31	chr17	+	2764	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-1046	131	-1046	-131	mono-exon	FALSE	NA	NA	NA	NA	NA	948	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGATTGGATGGTTTA	NA	False	NA	-73	True	NA	NA	NA	40156197	40158961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40156200_40159000
ES.15197.4	chr17	+	3820	2	Genic_Genomic	ENSMUSG00000119584.1	novel	1849	1	NA	NA	-3356	-1324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAACAATACAGGACT	NA	False	NA	NA	False	NA	NA	NA	40153887	40157768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_40156070_40156130
ES.15197.5	chr17	+	901	1	Intergenic	novelGene_12672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCTAGCTATCTTCCG	NA	False	NA	NA	False	GGGGCT	-43	NA	40153887	40154788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40153900_40154800
ES.15197.6	chr17	+	5476	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	-271	-3356	271	mono-exon	FALSE	NA	NA	NA	NA	NA	1055	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCGTGTCTACGAGG	NA	False	NA	NA	False	NA	NA	NA	40153887	40159363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40159400
ES.15197.7	chr17	+	4635	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	570	-3356	-570	mono-exon	FALSE	NA	NA	NA	NA	NA	952	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACACGGACAGGATTGAC	NA	False	NA	122	True	NA	NA	NA	40153887	40158522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40158500
ES.15197.8	chr17	+	3429	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	1776	-3356	-1776	mono-exon	FALSE	NA	NA	NA	NA	NA	558	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACAGTGAAACTGCGAAT	NA	False	NA	48	True	NA	NA	NA	40153887	40157316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40157300
ES.15197.9	chr17	+	4197	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	-3356	1008	-3356	-1008	mono-exon	FALSE	NA	NA	NA	NA	NA	832	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCGCCTGGATACCGCA	NA	False	NA	-21	True	NA	NA	NA	40153887	40158084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_40153900_40158100
ES.15198.1	chr17	-	5710	1	Genic_Genomic	ENSMUSG00000118642.2	novel	NA	NA	NA	NA	121	5106	mono-exon	FALSE	NA	NA	NA	NA	NA	10648	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTACCTTCTTAATCAC	NA	False	NA	NA	False	NA	NA	NA	40159597	40153887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_40153900_40159600
ES.15198.10	chr17	-	434	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1037	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTTCCCGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	40158950	40158516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40158500_40159000
ES.15198.11	chr17	-	240	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1007	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTGTCCCTCTAAGAA	NA	False	NA	NA	False	NA	NA	NA	40158950	40158710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40158700_40159000
ES.15198.2	chr17	-	4908	1	Genic_Genomic	ENSMUSG00000118642.2	novel	NA	NA	NA	NA	588	4771	mono-exon	FALSE	NA	NA	NA	NA	NA	10596	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGTATGCAACGCCACC	NA	False	NA	NA	False	AAGAAA	-24	NA	40159130	40154222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_40154200_40159100
ES.15198.3	chr17	-	4588	1	Genic_Genomic	ENSMUSG00000118642.2	novel	NA	NA	NA	NA	588	4451	mono-exon	FALSE	NA	NA	NA	NA	NA	10434	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTCGAGAAACTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	40159130	40154542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_40154500_40159100
ES.15198.4	chr17	-	662	1	Intergenic	novelGene_12681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGACCGGCTGCG	NA	False	NA	NA	False	NA	NA	NA	40156465	40155803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_40155800_40156500
ES.15198.5	chr17	-	2753	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4669	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCCAGGGTACCCACCT	NA	False	NA	NA	False	NA	NA	NA	40158950	40156197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40156200_40159000
ES.15198.6	chr17	-	1706	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1184	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGAGCGCGAGCGAAG	NA	False	NA	NA	False	NA	NA	NA	40158952	40157246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40157200_40159000
ES.15198.7	chr17	-	1393	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1166	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTATCTAGAGTCACCA	NA	False	NA	NA	False	NA	NA	NA	40158950	40157557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40157600_40159000
ES.15198.8	chr17	-	1258	1	Antisense	novelGene_ENSMUSG00000119584.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCTCCGGAATCGA	NA	False	NA	NA	False	NA	NA	NA	40158950	40157692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_40157700_40159000
ES.15198.9	chr17	-	1232	1	Genic_Genomic	ENSMUSG00000118642.2	novel	NA	NA	NA	NA	121	628	mono-exon	FALSE	NA	NA	NA	NA	NA	1048	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACGCCGCCGCATTGCC	NA	False	NA	NA	False	NA	NA	NA	40159597	40158365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_40158400_40159600
ES.15199.1	chr17	+	163	1	Intergenic	novelGene_12682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	40159789	40159952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40159800_40160000
ES.152.1	chr1	-	5245	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-4285	0	3243	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTAATGTAGTCAATATA	NA	False	NA	NA	False	AATAAA	-22	NA	16727266	16708705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.10	chr1	-	969	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	-8	-1	-8	1	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTTGTTTATTG	NA	False	NA	-1	True	TATAAA	-21	NA	16727274	16712989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.11	chr1	-	1037	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-22	-374	2	-1	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGTGTTTTGTTTAT	NA	False	NA	-3	True	TATAAA	-19	NA	16727264	16712991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ES.152.12	chr1	-	925	4	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCATCTTGTGTTTTGTT	NA	False	NA	-6	True	TATAAA	-16	NA	16727105	16712994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
ES.152.13	chr1	-	672	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	288	0	87	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTTCTCCTGGATAT	NA	False	NA	5	True	AATAAA	-24	NA	16727266	16713278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.14	chr1	-	684	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-7	1337	-7	80	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATGGTTTGCTTTCTCC	NA	False	NA	-2	True	AATAAA	-17	NA	16727115	16713285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ES.152.15	chr1	-	737	4	NNC	ENSMUSG00000079658.10	novel	641	4	NA	NA	2	79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1098.3633278656	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGATGGTTTGCTTTCTC	NA	False	NA	-3	True	AATAAA	-16	NA	16727264	16713286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16713698_16715909_16716054_16718178_16718232_16727135
ES.152.16	chr1	-	529	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	-47	478	-47	-54	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAGTTCAGTTAGT	NA	False	NA	-2	True	AATAAA	-39	NA	16727313	16713468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.17	chr1	-	364	3	NIC	ENSMUSG00000079658.10	novel	960	4	NA	NA	-27	-55	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	513	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTGTAGTTCAGTTAG	NA	False	NA	-3	True	AATAAA	-38	NA	16727293	16713469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16713703_16718178_16718232_16727215
ES.152.18	chr1	-	560	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-23	104	1	-55	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTGTAGTTCAGTTAG	NA	False	NA	-3	True	AATAAA	-38	NA	16727265	16713469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ES.152.19	chr1	-	515	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-22	1521	-6	-55	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTGTAGTTCAGTTAG	NA	False	NA	-3	True	AATAAA	-38	NA	16727130	16713469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ES.152.2	chr1	-	2236	1	Genic_Genomic	ENSMUSG00000079658.10	novel	NA	NA	NA	NA	6249	2170	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	16712014	16709778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_16709800_16712000
ES.152.20	chr1	-	2402	4	NNC	ENSMUSG00000079658.10	novel	620	5	NA	NA	1	-55	intron_retention	TRUE	non_canonical	0	0	junction_2	1121.22264614225	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTGTAGTTCAGTTAG	NA	False	NA	-3	True	AATAAA	-38	NA	16727265	16713469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16713703_16715909_16716271_16716473_16718232_16727215
ES.152.22	chr1	-	1685	4	NIC	ENSMUSG00000079658.10	novel	620	5	NA	NA	-8	-59	intron_retention	FALSE	canonical	2	15	junction_2	1115.5956057441	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATACCTGTAGTTCAG	NA	False	NA	-7	True	AATAAA	-34	NA	16727250	16713473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_16713703_16715909_16717278_16718178_16718232_16727215
ES.152.23	chr1	-	443	4	NNC	ENSMUSG00000079658.10	novel	534	4	NA	NA	-7	-72	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTCAGTATTTAAT	NA	False	NA	-20	True	AATAAA	-21	NA	16727115	16713486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
ES.152.3	chr1	-	2212	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	-1252	0	210	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTTCTTCAGT	NA	False	NA	NA	False	TATAAA	-45	NA	16727266	16711738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.4	chr1	-	2066	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-33	-19	-2	19	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTAGCATTGTCTCCT	NA	False	NA	19	True	AATAAA	-42	NA	16727141	16711929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ES.152.5	chr1	-	2058	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	-57	-1041	-57	-1	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATCAGCACTTGGTCTTT	NA	False	NA	-1	True	AATAAA	-22	NA	16727323	16711949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.6	chr1	-	1981	4	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATCAGCACTTGGTCTT	NA	False	NA	-2	True	AATAAA	-21	NA	16727117	16711950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
ES.152.7	chr1	-	5055	2	ISM	ENSMUSG00000079658.10	ENSMUST00000185393.7	366	3	-951	-1613	-951	-4	intron_retention	FALSE	canonical	3	2725	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGATCAGCACTTGGTC	NA	False	NA	-4	True	AATAAA	-19	NA	16719214	16711952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_16713703_16715909
ES.152.8	chr1	-	1131	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	2	-173	2	173	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTCTCAAGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	16727264	16712817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ES.152.9	chr1	-	997	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	-23	1040	7	2	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTTGTTTATTGC	NA	False	NA	0	True	TATAAA	-22	NA	16727131	16712988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ES.1520.1	chr1	+	4051	15	ISM	ENSMUSG00000052726.17	ENSMUST00000120796.8	3540	28	-464	99961	-427	-13397	intron_retention	FALSE	canonical	0	0	junction_1	2.93205367882483	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGCTTGCCTTGTATATT	NA	False	NA	NA	False	ATTAAA	-44	NA	140173468	140437559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437
ES.1520.10	chr1	+	3626	29	NNC	ENSMUSG00000052726.17	novel	3540	28	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.48520927255013	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAGCCTGACTGGAATG	NA	False	NA	NA	False	ATTAAA	-16	NA	140173906	140537523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140310997_140311073_140344583_140344638_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437_140435588_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.11	chr1	+	5194	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140186979	140192173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_140187000_140192200
ES.1520.12	chr1	+	3043	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140220512	140223555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_140220500_140223600
ES.1520.13	chr1	+	5019	17	NIC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-16034	371	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	2.91547594742265	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTCTTTTCTTTGAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	140354639	140540176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.14	chr1	+	3949	11	NIC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-3566	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.34813380855664	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGAAAATTCCTTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	140437127	140539795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_140437352_140440558_140440773_140446603_140446710_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.15	chr1	+	4310	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGAGTGCAACGTT	NA	False	NA	NA	False	GATAAA	-13	NA	140451509	140455819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_140451500_140455800
ES.1520.2	chr1	+	3843	26	NIC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-409	79	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.08441242378512	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATCATTTTGAAACTTA	NA	False	NA	NA	False	AATAAA	-19	NA	140173486	140537599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.3	chr1	+	3890	27	NNC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-337	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.59239828579557	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTTTGAAACTTAATG	NA	False	NA	NA	False	AATAAA	-22	NA	140173558	140537602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140310997_140311073_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140435437_140435588_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.4	chr1	+	5818	29	NNC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.34724986110285	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTTTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-32	NA	140173861	140539805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140310997_140311073_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437_140435548_140437183_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140506192_140506214_140511756_140512058_140523712_140523798_140537338
ES.1520.5	chr1	+	5886	28	NNC	ENSMUSG00000052726.17	novel	3540	28	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.37016686402291	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCCTTGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	140173870	140539801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140310997_140311073_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437_140435588_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.6	chr1	+	3727	18	ISM	ENSMUSG00000052726.17	ENSMUST00000119786.8	3624	27	-73	85341	-24	1520	5prime_fragment	FALSE	canonical	0	0	junction_1	3.10485722832862	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTCAGATTCCTGGA	NA	False	NA	NA	False	AATAAA	-8	NA	140173871	140452476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140437121_140437352_140440558_140440773_140446603_140446710_140450825
ES.1520.7	chr1	+	3610	27	FSM	ENSMUSG00000052726.17	ENSMUST00000120709.8	5790	27	-24	2204	-24	81	multi-exon	FALSE	canonical	0	0	junction_1	3.00221811490562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCATTTTGAAACTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	140173871	140537601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437_140435588_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.8	chr1	+	4380	27	FSM	ENSMUSG00000052726.17	ENSMUST00000120709.8	5790	27	-24	1434	-24	554	multi-exon	FALSE	canonical	0	0	junction_1	3.00221811490562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTTAAAGTTGAAAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	140173871	140538371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933_140378043_140411862_140411972_140435437_140435588_140437121_140437352_140440558_140440773_140446603_140446710_140450825_140450999_140461598_140461734_140480697_140480810_140498119_140498222_140501332_140501417_140502466_140502596_140511756_140512058_140523712_140523798_140537338
ES.1520.9	chr1	+	1792	14	NNC	ENSMUSG00000052726.17	novel	5790	27	NA	NA	-20	6661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5551446179358	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGTTTGCACATAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	140173875	140378346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_140174090_140278945_140279026_140282191_140282292_140290686_140290736_140293262_140293323_140302845_140302921_140304090_140304175_140310738_140310834_140310997_140311073_140352930_140353112_140354565_140354731_140356546_140356684_140359107_140359172_140377933
ES.15200.1	chr17	+	5226	1	Intergenic	novelGene_12683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	40489619	40494845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40489600_40494800
ES.15200.2	chr17	+	3358	2	Intergenic	novelGene_12684	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	40489660	40494847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40489888_40491716
ES.15200.3	chr17	+	4699	1	Intergenic	novelGene_12685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCTAGTTCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	40489662	40494361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40489700_40494400
ES.15201.1	chr17	+	176	1	Intergenic	novelGene_12686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGCTAAAATTACAG	NA	False	NA	NA	False	NA	NA	NA	40758621	40758797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_40758600_40758800
ES.15202.1	chr17	-	1723	11	NNC	ENSMUSG00000025431.5	novel	1416	8	NA	NA	-176312	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.78567765543682	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCTCTTAGTATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	40806410	40604650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_40605403_40609044_40609134_40612213_40612309_40615952_40616099_40618582_40618671_40619747_40619865_40623895_40623970_40630045_40630077_40805032_40805125_40806054_40806229_40806345
ES.15203.1	chr17	-	177	1	Intergenic	novelGene_12687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	41057692	41057515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_41057500_41057700
ES.15204.1	chr17	+	3434	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	-87	327	-87	-327	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTAGTGTGATGTTACT	NA	False	NA	17	True	AATAAA	-18	NA	41245488	41272552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.12	chr17	+	5227	13	NNC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	19	-328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	97.6690486057664	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGTGTGATGTTAC	NA	False	NA	16	True	AATAAA	-17	NA	41245594	41272551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41268547_41268637_41269369_41269592_41269761_41271458
ES.15204.13	chr17	+	3076	12	NIC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	22	-327	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	101.484681089649	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTAGTGTGATGTTACT	NA	False	NA	17	True	AATAAA	-18	NA	41245597	41272552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.14	chr17	+	2267	12	NIC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	24	-1134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	101.484681089649	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCAGTCATGCCAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	41245599	41271745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.15	chr17	+	2626	12	NIC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	28	-771	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	101.484681089649	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGATTCTTCCTTCAATT	NA	False	NA	NA	False	NA	NA	NA	41245603	41272108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.16	chr17	+	3271	13	NNC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	31	-328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	97.7580630377305	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGTGTGATGTTAC	NA	False	NA	16	True	AATAAA	-17	NA	41245606	41272551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269723_41271464
ES.15204.17	chr17	+	3976	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	31	-333	31	333	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTACTTTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	41245606	41273212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.19	chr17	+	3751	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	43	-120	43	120	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGATTTTATGTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	41245618	41272999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.2	chr17	+	3013	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	-17	678	-17	-678	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGGAGGGTATTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	41245558	41272201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.21	chr17	+	3883	10	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	5207	333	5207	-333	3prime_fragment	FALSE	canonical	3	278	junction_2	31.2164882041922	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTTGTAGTGTGAT	NA	False	NA	11	True	AATAAA	-12	NA	41250782	41272546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.22	chr17	+	2303	9	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	9120	333	9120	-333	3prime_fragment	FALSE	canonical	3	278	junction_1	33.0444776021652	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTTGTAGTGTGAT	NA	False	NA	11	True	AATAAA	-12	NA	41254695	41272546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.3	chr17	+	3533	14	NNC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	-5	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.358139040282	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTGTAGTGTGATGT	NA	False	NA	13	True	AATAAA	-14	NA	41245570	41272548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_41245671_41247934_41248354_41249405_41249774_41250705_41250891_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.4	chr17	+	3681	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	-4	-3	-4	3	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTGTTCCAT	NA	False	NA	NA	False	TATAAA	-26	NA	41245571	41272882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.5	chr17	+	2668	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	1	1005	1	-1005	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAGCTTACAATT	NA	False	NA	NA	False	ATTAAA	-12	NA	41245576	41271874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.6	chr17	+	3420	12	NIC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	101.484681089649	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTTCCTGTTGTGTGTT	NA	False	NA	NA	False	TATAAA	-22	NA	41245579	41272878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.7	chr17	+	3527	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12	135	12	-135	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGACTCTTAGGAGGG	NA	False	NA	NA	False	AATAAA	-23	NA	41245587	41272744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.8	chr17	+	5654	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	12	-1992	12	1992	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACCCTTCTAGATACT	NA	False	NA	NA	False	AATAAA	-12	NA	41245587	41274871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15204.9	chr17	+	2880	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	15	779	15	-779	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTAACCGATTCTTC	NA	False	NA	NA	False	NA	NA	NA	41245590	41272100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ES.15205.1	chr17	-	2127	1	FSM	ENSMUSG00002075699.1	ENSMUST00020182095.1	148	1	-1202	-777	-1202	777	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGGAGTTTCCATAT	NA	False	NA	NA	False	ATTAAA	-22	NA	41229780	41227653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_41227700_41229800
ES.15205.2	chr17	-	2897	2	Intergenic	novelGene_12688	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTATGGGAGTTTCCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	41232369	41227655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_41228234_41230050
ES.15205.3	chr17	-	3753	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	430	-2241	430	2241	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGATATCATTTCTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	41245508	41231700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ES.15205.4	chr17	-	1660	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	464	-182	464	182	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATTCTTGCTATTTTT	NA	False	NA	NA	False	NA	NA	NA	41245474	41233759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ES.15205.5	chr17	-	5379	3	ISM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	5813	-2	-2030	2	intron_retention	FALSE	canonical	3	128	junction_2	2.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTGAGTAGAACTTT	NA	False	NA	1	True	AATAAA	-29	NA	41240125	41233939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_41234508_41235179_41235258_41235392
ES.15205.6	chr17	-	1906	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	36	0	36	0	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTGTGAGTAGAACT	NA	False	NA	-1	True	AATAAA	-27	NA	41245902	41233941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ES.15205.7	chr17	-	1452	9	NNC	ENSMUSG00000023919.10	novel	1942	9	NA	NA	473	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.8807225759241	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAAATGC	NA	False	NA	-36	True	NA	NA	NA	41245465	41233976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_41234508_41235179_41235276_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ES.15205.8	chr17	-	1477	7	NIC	ENSMUSG00000023919.10	novel	728	2	NA	NA	469	106	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	58.0631839751605	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAACCGGTGGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	41245469	41236593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_41237362_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ES.15206.1	chr17	+	1060	2	Intergenic	novelGene_12689	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCTTGGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	41497816	41503639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_41498204_41502966
ES.15206.2	chr17	+	5087	1	Intergenic	novelGene_12690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTTAGCTGCATTT	NA	False	NA	NA	False	NA	NA	NA	41497824	41502911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_41497800_41502900
ES.15207.1	chr17	+	2858	1	Intergenic	novelGene_12691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTATTTTGGATTAGG	NA	False	NA	NA	False	NA	NA	NA	43175257	43178115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43175300_43178100
ES.15208.1	chr17	+	176	1	Intergenic	novelGene_12692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTCTCTAGTA	NA	False	NA	NA	False	NA	NA	NA	43183657	43183833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43183700_43183800
ES.15209.1	chr17	-	5609	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTCCTGGTTAT	NA	False	NA	2	True	AATAAA	-22	NA	43187556	43103836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.11	chr17	-	5422	19	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	102.911939462584	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTTGTTTTTTCCT	NA	False	NA	-4	True	AATAAA	-16	NA	43187298	43103842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43121930_43122008_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.12	chr17	-	5417	17	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.1191048190566	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTGTTGTTTTTTCCT	NA	False	NA	-4	True	AATAAA	-16	NA	43187546	43103842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.15	chr17	-	5220	17	NIC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	77.3906234226731	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGTGTTGTTTTTTCC	NA	False	NA	-5	True	AATAAA	-15	NA	43187299	43103843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43187203
ES.15209.16	chr17	-	5331	16	FSM	ENSMUSG00000061665.8	ENSMUST00000233476.2	3157	16	-249	-1925	-8	-1	multi-exon	FALSE	canonical	0	0	junction_15	79.731103647754	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGTGTTGTTTTTTCC	NA	False	NA	-5	True	AATAAA	-15	NA	43187564	43103843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43187203
ES.15209.17	chr17	-	5323	17	NIC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	75.0930412471755	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGTGTTGTTTTTTCC	NA	False	NA	-5	True	AATAAA	-15	NA	43187346	43103843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.18	chr17	-	5437	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-306	233	-30	-232	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAGTTAACAAAA	NA	False	NA	0	True	AATAAA	-27	NA	43187586	43104074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.19	chr17	-	5387	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-25	-241	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187581	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.2	chr17	-	5681	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-314	-3	-38	3	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTTTTCCTGGTT	NA	False	NA	0	True	AATAAA	-20	NA	43187594	43103838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.22	chr17	-	6336	7	ISM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	57402	242	-8395	-241	3prime_fragment	FALSE	canonical	3	147	junction_3	55.0121198767447	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43129878	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317
ES.15209.23	chr17	-	5300	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	44	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	89.1793418752406	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187512	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127466_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.24	chr17	-	5146	19	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-23	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0785346201073	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187338	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43105537_43105570_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.25	chr17	-	4485	14	NNC	ENSMUSG00000061665.8	novel	3157	16	NA	NA	-3212	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	97.9226237224391	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43145133	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135429_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055
ES.15209.26	chr17	-	7502	17	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	1	-241	intron_retention	FALSE	canonical	0	0	junction_2	76.7141355536905	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187555	43104083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109567_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.31	chr17	-	4872	16	NIC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-26	-243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	79.2396085020336	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCTATTAATATTTTT	NA	False	NA	-11	True	AATAAA	-43	NA	43187341	43104085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.32	chr17	-	5168	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-1	-246	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	74.7611652792413	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTGCTGCTATTAATATT	NA	False	NA	-14	True	AATAAA	-40	NA	43187316	43104088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43141012_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.33	chr17	-	5157	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-1	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.6734528964213	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATGACTTTAATAAAATC	NA	False	NA	-43	True	AATAAA	-11	NA	43187316	43104117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133310_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.34	chr17	-	3737	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-301	1928	-25	-1	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATAGAGCTGAAGTAG	NA	False	NA	NA	False	ATTAAA	-25	NA	43187581	43105769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.35	chr17	-	3674	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-27	-30	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTCAGATTTCTTGTG	NA	False	NA	NA	False	AATACA	-37	NA	43187583	43105798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.36	chr17	-	3602	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	1	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.6734528964213	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAGAAAAAAAATTAAA	NA	False	NA	NA	False	AATACA	-22	NA	43187555	43105813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135429_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.37	chr17	-	7196	16	NIC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-21379	-47	intron_retention	FALSE	canonical	3	147	junction_3	41.784845737819	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAGAAAAAAAATTA	NA	False	NA	NA	False	AATACA	-20	NA	43163300	43105815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258
ES.15209.38	chr17	-	2868	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	5	-563	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGTACCCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	43187310	43106331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.39	chr17	-	3127	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-259	2496	17	-569	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTATTCATTGTACCCT	NA	False	NA	NA	False	NA	NA	NA	43187539	43106337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.40	chr17	-	2984	17	NIC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-2	-570	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	77.3906234226731	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTATTCATTGTACCC	NA	False	NA	NA	False	NA	NA	NA	43187558	43106338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43187203
ES.15209.41	chr17	-	2937	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-254	2681	22	-754	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGATTAATCTTGAGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	43187534	43106522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.42	chr17	-	2496	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	86	-1114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	75.1515193795302	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGCTGTAAGATAAAC	NA	False	NA	54	True	TATAAA	-18	NA	43187470	43106882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187220
ES.15209.44	chr17	-	2557	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-304	3111	-28	-1184	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTTTTTTATTGAAAC	NA	False	NA	-16	True	TATAAA	-18	NA	43187584	43106952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.46	chr17	-	2333	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	-42393	-1186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	75.1515193795302	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTTTTTTTATTGAA	NA	False	NA	-18	True	TATAAA	-16	NA	43229949	43106954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43229790
ES.15209.47	chr17	-	2153	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-53	3264	-18	-1337	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGGGGGTGACAGGT	NA	False	NA	NA	False	CATAAA	-16	NA	43187333	43107105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.48	chr17	-	1730	12	ISM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-219	23312	57	1	5prime_fragment	FALSE	canonical	3	243	junction_10	24.5208631021163	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCTGATTTTGTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	43187499	43127153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.49	chr17	-	1177	8	ISM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-55	32740	-20	-270	5prime_fragment	FALSE	canonical	3	243	junction_6	25.2441142867491	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGTTTTTGTCTTGCG	NA	False	NA	NA	False	TATAAA	-11	NA	43187335	43136581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ES.15209.5	chr17	-	4413	11	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	5104	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.8894504236084	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43136817	43103841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135429_43135470_43136727
ES.15209.50	chr17	-	175	1	Intergenic	novelGene_12693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43192528	43192353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43192400_43192500
ES.15209.8	chr17	-	5601	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	73.3429164337188	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187518	43103841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145167_43149583_43149694_43156216_43156371_43163258_43163420_43187203
ES.1521.1	chr1	-	843	3	NNC	ENSMUSG00000102368.2	novel	553	4	NA	NA	-22	28054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGATCTGTCCACAAGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	140584164	140469859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_140470531_140549131_140549205_140584065
ES.1521.2	chr1	-	7708	1	Antisense	novelGene_ENSMUSG00000052726.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCTTTTGTAAATCT	NA	False	NA	NA	False	NA	NA	NA	140531259	140523551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_140523600_140531300
ES.1521.3	chr1	-	1014	2	NNC	ENSMUSG00000102368.2	novel	553	4	NA	NA	-20	-68858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAAAAAAAAATCTCC	NA	False	NA	NA	False	NA	NA	NA	140584162	140566771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_140567689_140584065
ES.15210.1	chr17	+	196	1	Intergenic	novelGene_12694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTTTGAGAACAGAAG	NA	False	NA	NA	False	NA	NA	NA	43235010	43235206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43235000_43235200
ES.15211.1	chr17	-	180	1	Intergenic	novelGene_12695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	43248504	43248324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43248300_43248500
ES.15212.1	chr17	+	290	1	Intergenic	novelGene_12696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATAATGCCAATGTT	NA	False	NA	NA	False	NA	NA	NA	43262961	43263251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43263000_43263300
ES.15213.1	chr17	-	176	1	Intergenic	novelGene_12697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAATAAATT	NA	False	NA	NA	False	NA	NA	NA	43264283	43264107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43264100_43264300
ES.15214.1	chr17	-	161	1	Intergenic	novelGene_12698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	43287297	43287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43287100_43287300
ES.15215.1	chr17	+	168	1	Intergenic	novelGene_12699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAATAAAAAACATT	NA	False	NA	NA	False	NA	NA	NA	43296032	43296200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43296000_43296200
ES.15216.1	chr17	+	3703	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-70	-6	-70	6	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGGTATATTTACTA	NA	False	NA	27	True	AATAAA	-23	NA	43327375	43400086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.10	chr17	+	3355	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19721	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43347179	43400080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.11	chr17	+	3849	5	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19731	-944	intron_retention	FALSE	canonical	3	79	junction_1	62.9146246909254	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTCTCCATTTTTGCC	NA	False	NA	17	True	ACTAAA	-17	NA	43347189	43399136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347446_43348485_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.12	chr17	+	4772	5	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19751	-1	intron_retention	FALSE	canonical	3	79	junction_1	62.9146246909254	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43347209	43400079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347446_43348485_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.13	chr17	+	2742	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19760	-944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.099024104751	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTCTCCATTTTTGCC	NA	False	NA	17	True	ACTAAA	-17	NA	43347218	43399136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347816_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.14	chr17	+	3115	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19769	-192	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTGTCTGATAAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	43347227	43399888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.16	chr17	+	3398	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	20048	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.099024104751	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43347506	43400080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347816_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.17	chr17	+	3143	5	ISM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	20985	1	20972	-1	3prime_fragment	FALSE	canonical	3	190	junction_1	17.3835410661925	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43348430	43400079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.18	chr17	+	5262	4	ISM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	21044	1	21031	-1	intron_retention	FALSE	canonical	3	190	junction_1	11.4309521329882	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43348489	43400079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_43349138_43350585_43351081_43375858_43376125_43396226
ES.15216.19	chr17	+	2514	5	NNC	ENSMUSG00000023915.6	novel	1659	2	NA	NA	22076	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	95.100933223602	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTGTGGTTTTGGTA	NA	False	NA	18	True	AATAAA	-14	NA	43349534	43400077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43349615_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.2	chr17	+	3449	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	-12	190	-12	-190	multi-exon	FALSE	canonical	3	155	junction_1	28.3450171987953	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTCTGATAAATTTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	43327433	43399890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.20	chr17	+	1870	3	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	60719	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	116.5	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43388177	43400079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43388373_43396226_43396456_43398633
ES.15216.21	chr17	+	4445	1	Intergenic	novelGene_12702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTTTTCTAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	43388177	43392622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43388200_43392600
ES.15216.22	chr17	+	4206	4	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	60813	-855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.734805081795	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGCTGGGTCCCGAGA	NA	False	NA	106	True	CATAAA	-17	NA	43388271	43399225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43391465_43394519_43394712_43396226_43396456_43398633
ES.15216.23	chr17	+	7825	3	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	62474	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.5	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTTTTGGTAT	346	False	NA	19	True	AATAAA	-15	NA	43389932	43400078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43391435_43391577_43396456_43398633
ES.15216.24	chr17	+	2132	2	Intergenic	novelGene_12703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTTTTCTAGTCTTT	761	False	NA	NA	False	NA	NA	NA	43390347	43392622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43391435_43391577
ES.15216.25	chr17	+	3408	1	Genic_Genomic	ENSMUSG00000023915.6	novel	NA	NA	NA	NA	69886	672	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCTAACTAAAAAAAAAAAAA	7758	False	NA	NA	False	NA	NA	NA	43397344	43400752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_43397300_43400800
ES.15216.3	chr17	+	3568	7	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.744731626749	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	False	NA	20	True	AATAAA	-16	NA	43327433	43400079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43327825_43327894_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.4	chr17	+	5086	5	NIC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	155	junction_1	30.9232921921325	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43327434	43400080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_43327984_43348485_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.5	chr17	+	4138	5	NIC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	-9	-946	intron_retention	FALSE	canonical	3	155	junction_1	30.9232921921325	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATATTCTCCATTTTTG	NA	False	NA	15	True	ACTAAA	-15	NA	43327436	43399134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_43327984_43348485_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.6	chr17	+	3400	7	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.744731626749	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTTTTGGTAT	NA	False	NA	19	True	AATAAA	-15	NA	43327438	43400078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633_43399673_43399904
ES.15216.7	chr17	+	3707	7	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.6689419530191	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTTTTGGTATAT	NA	False	NA	21	True	AATAAA	-17	NA	43327446	43400080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43327984_43348485_43349138_43350585_43351081_43354447_43354529_43375858_43376125_43396226_43396456_43398633
ES.15216.8	chr17	+	3183	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	18023	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.099024104751	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTGTGGTTTTGGTA	NA	False	NA	18	True	AATAAA	-14	NA	43345481	43400077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43345579_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15216.9	chr17	+	2412	6	NNC	ENSMUSG00000023915.6	novel	3627	6	NA	NA	19720	-944	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	56.2899635814414	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTCTCCATTTTTGCC	NA	False	NA	17	True	ACTAAA	-17	NA	43347178	43399136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43347446_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ES.15217.1	chr17	-	2288	2	Antisense	novelGene_ENSMUSG00000023915.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGTGACCAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	43351058	43331729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_43333848_43350888
ES.15217.2	chr17	-	2363	3	Antisense	novelGene_ENSMUSG00000023915.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43351046	43331768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_43333848_43346464_43346591_43350888
ES.15217.3	chr17	-	2492	3	Antisense	novelGene_ENSMUSG00000023915.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43346840	43331768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_43333998_43346464_43346591_43346703
ES.15217.4	chr17	-	1595	1	Intergenic	novelGene_12700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43339607	43338012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43338000_43339600
ES.15217.5	chr17	-	1015	1	Antisense	novelGene_ENSMUSG00000023915.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-19	NA	43350724	43349709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_43349700_43350700
ES.15218.1	chr17	-	377	1	Intergenic	novelGene_12701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAGTCTTTGTTAGTAA	NA	False	NA	NA	False	AATAAA	-25	NA	43388092	43387715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43387700_43388100
ES.15219.1	chr17	-	172	1	Intergenic	novelGene_12704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAATCAAACA	NA	False	NA	NA	False	NA	NA	NA	43508820	43508648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_43508600_43508800
ES.1522.1	chr1	+	159	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	140631221	140631380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_140631200_140631400
ES.15220.1	chr17	+	2492	9	ISM	ENSMUSG00000056492.7	ENSMUST00000225962.2	4868	15	14963	1185	11343	-486	3prime_fragment	FALSE	canonical	0	0	junction_3	1.49478259288767	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGGCTCAACTTTTCTC	NA	False	NA	NA	False	TTTAAA	-12	NA	43752865	43766477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_43752894_43755877_43756031_43756894_43757104_43757763_43757944_43760682_43762087_43763170_43763213_43763306_43763367_43763961_43764047_43766146
ES.15220.2	chr17	+	2461	5	ISM	ENSMUSG00000056492.7	ENSMUST00000225962.2	4868	15	23246	180	19626	-180	3prime_fragment	FALSE	canonical	1	1	junction_2	1.6393596310755	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTGATTGGTGTTTC	NA	False	NA	NA	False	AATATA	-14	NA	43761148	43767482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_43762087_43763170_43763213_43763306_43763367_43763961_43764047_43766146
ES.15221.1	chr17	+	187	1	Intergenic	novelGene_12705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAGGGGGGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	43894801	43894988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_43894800_43895000
ES.15222.1	chr17	-	4570	11	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	-27	1256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.47660585711988	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTATATTAGTTATGTCA	NA	False	NA	NA	False	NA	NA	NA	43978050	43951525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43970887_43971279_43972504_43972590_43974964_43975157_43977790
ES.15222.10	chr17	-	3114	1	NIC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	20957	-1171	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCGCTTAACCTTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	43957066	43953952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_43954000_43957100
ES.15222.11	chr17	-	4862	9	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	15	-1176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.38193731461717	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGTCGCTTAACCT	NA	False	NA	NA	False	AATAAA	-22	NA	43978008	43953957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954814_43954866_43958015_43958582_43958676_43960515_43960601_43970706_43970790_43970887_43970990_43972504_43972590_43974964_43975157_43977790
ES.15222.12	chr17	-	2679	11	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	-5	-1184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.28485705712571	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGCTGAAAGAAGTCG	NA	False	NA	NA	False	AATAAA	-14	NA	43978028	43953965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43970887_43970990_43972504_43972590_43974964_43976017_43977790
ES.15222.2	chr17	-	4259	2	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	20933	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43957090	43952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954813_43954862
ES.15222.3	chr17	-	6086	9	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	377	0	intron_retention	FALSE	canonical	0	0	junction_8	4.27200187265877	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43977646	43952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43972504_43972590_43974964_43975157_43977567
ES.15222.4	chr17	-	6391	10	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_2	4.45831169949753	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43978077	43952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43958015_43958582_43958676_43959899_43959997_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43972504_43972590_43974964_43975157_43977790
ES.15222.5	chr17	-	2913	11	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.96106046406767	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43977938	43952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43970887_43970990_43972504_43972590_43974964_43975157_43977790
ES.15222.6	chr17	-	2881	10	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.17517649512354	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43978008	43952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43972504_43972590_43974964_43975157_43977790
ES.15222.7	chr17	-	2784	2	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	22395	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCTCAGCTT	NA	False	NA	NA	False	AGTAAA	-39	NA	43955628	43952790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954813_43954866
ES.15222.8	chr17	-	2681	10	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	56	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.17517649512354	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGCTCAGCTT	NA	False	NA	NA	False	AGTAAA	-39	NA	43977967	43952790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954418_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43972504_43972590_43974964_43975157_43977790
ES.15222.9	chr17	-	2817	10	NNC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	287	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.66666666666667	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTGAAAAAAAAATGGCT	NA	False	NA	NA	False	AGTAAA	-33	NA	43977736	43952796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43970706_43970790_43972504_43972590_43974964_43975157_43977567
ES.15223.1	chr17	+	2622	12	FSM	ENSMUSG00000023963.11	ENSMUST00000170988.2	3053	12	-145	576	-145	0	multi-exon	FALSE	canonical	3	74	junction_8	14.3492448040404	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCATCTGGTTTTGTGCC	NA	False	NA	4	True	AATAAA	-1	NA	43978170	44061746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ES.15223.2	chr17	+	2614	13	NNC	ENSMUSG00000023963.11	novel	3053	12	NA	NA	-118	75568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	29.6558969215605	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGCAAAAAACCAACCA	NA	False	NA	NA	False	NA	NA	NA	43978197	44137890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794_44061722_44137846
ES.15223.3	chr17	+	3917	12	NIC	ENSMUSG00000023963.11	novel	3053	12	NA	NA	-100	1931	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	30.8397618196203	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTTATACATGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	43978215	44064253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44061961
ES.15223.4	chr17	+	3018	7	NNC	ENSMUSG00000023963.11	novel	2338	11	NA	NA	29	-56426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	38.857288748559	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTCATTCATTAAGT	NA	False	NA	NA	False	NA	NA	NA	43978344	44005320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44003881_44004551
ES.15223.5	chr17	+	3425	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	-59	-452	-59	0	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGGCATCATTTC	4834	False	NA	5	True	AATATA	-14	NA	44112675	44350403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ES.15223.6	chr17	+	1084	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	-10	1840	-10	134	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGTGTTTGGTTGTTT	4883	False	NA	NA	False	NA	NA	NA	44112724	44348111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ES.15223.7	chr17	+	1236	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	11	1667	11	1	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTGTTCTTTCATGT	4904	False	NA	NA	False	ATTAAA	-16	NA	44112745	44348284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ES.15223.8	chr17	+	3191	5	NNC	ENSMUSG00000039601.17	novel	1003	5	NA	NA	21452	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.69334127671456	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGGCATCATTTC	1528	False	NA	5	True	AATATA	-14	NA	44136345	44350403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_44136424_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ES.15224.1	chr17	-	4575	7	Antisense	novelGene_ENSMUSG00000084474.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGATTTGAACTGGGCT	NA	False	NA	NA	False	NA	NA	NA	44015849	43978249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_43978684_43987719_43987856_43991012_43991188_43993836_43993987_43996074_43996168_44002524_44002630_44012367
ES.15225.1	chr17	+	2531	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	3	0	3	0	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	44389738	44397450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
ES.15225.2	chr17	+	1617	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	17	3184	17	-3184	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACTGGGAAGGCTGT	NA	False	NA	1	True	AGTAAA	-19	NA	44389752	44394266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_44389874_44391537_44392402_44393634
ES.15225.3	chr17	+	2428	4	FSM	ENSMUSG00000023960.14	ENSMUST00000154166.8	2490	4	54	8	-12	0	multi-exon	FALSE	canonical	1	1	junction_1	7.40870359029762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	44389757	44397450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_44389790_44391537_44392402_44393634_44393812_44396095
ES.15225.4	chr17	+	1525	3	ISM	ENSMUSG00000023960.14	ENSMUST00000154166.8	2490	4	54	3195	-12	-3187	5prime_fragment	FALSE	canonical	1	1	junction_1	9	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGAAACTGGGAAGGC	NA	False	NA	-2	True	AGTAAA	-16	NA	44389757	44394263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_44389790_44391537_44392402_44393634
ES.15225.5	chr17	+	3353	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	24	1441	-10	-1441	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAGAACTTGACCCTA	NA	False	NA	NA	False	AATAAA	-26	NA	44389759	44396009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_44389874_44391537_44392402_44393634
ES.15225.6	chr17	+	1222	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	44	3552	10	-3552	5prime_fragment	FALSE	canonical	3	19	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAACTCTCTGTTA	NA	False	NA	NA	False	AATACA	-18	NA	44389779	44393898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_44389874_44391537_44392402_44393634
ES.15225.7	chr17	+	4767	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	51	0	17	0	intron_retention	FALSE	canonical	3	19	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	44389786	44397450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_44389874_44391537_44392402_44393634
ES.15226.1	chr17	+	1928	1	Antisense	novelGene_ENSMUSG00000023961.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACGCTTCCTTATCC	NA	False	NA	NA	False	AATAAA	-27	NA	44416414	44418342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_44416400_44418300
ES.15227.1	chr17	-	4759	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-207	-107	-162	99	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAGATCTTTTTTAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	44416862	44407099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
ES.15227.2	chr17	-	4613	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	-52	-1	-52	1	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGCCTTCTTAATTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	44416752	44407197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
ES.15227.3	chr17	-	4332	5	NNC	ENSMUSG00000023961.17	novel	4445	4	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5494845269515	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCAGCCTTCTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44416678	44407199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_44407707_44407849_44410569_44412201_44412373_44412697_44413556_44416601
ES.15227.4	chr17	-	4648	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	-199	-4	-154	4	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAGCCTTCTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	44416854	44407202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
ES.15227.6	chr17	-	4584	4	NNC	ENSMUSG00000023961.17	novel	4445	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	14.7196014438797	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATATCAGCCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	44416697	44407206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_44410569_44412201_44412373_44412697_44413556_44416504
ES.15228.1	chr17	-	1334	2	NNC	ENSMUSG00000039153.18	novel	2818	6	NA	NA	206038	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGGCGTTTGGATTCT	NA	False	NA	NA	False	AATAAA	-21	NA	44839542	44806873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_44808131_44839465
ES.15229.1	chr17	+	169	1	Intergenic	novelGene_12706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGTAGTGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	45052146	45052315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45052100_45052300
ES.1523.1	chr1	+	236	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCCCCTGCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	141891023	141891259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_141891000_141891300
ES.15230.1	chr17	-	229	1	Intergenic	novelGene_12707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTTGTTTTGGTTTT	NA	False	NA	NA	False	AAGAAA	-32	NA	45065572	45065343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45065300_45065600
ES.15231.1	chr17	+	1519	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	-10	-1	-10	1	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGGCCTGCTTTGTTTC	NA	False	NA	27	True	AATAAA	-28	NA	45088028	45430178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ES.15231.2	chr17	+	1429	12	NIC	ENSMUSG00000038954.15	novel	1180	12	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	42.0224261260658	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGGAGTGGCCTGCTTTG	NA	False	NA	23	True	AATAAA	-24	NA	45088053	45430174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352194_45359168_45359280_45430010
ES.15231.3	chr17	+	1610	13	NNC	ENSMUSG00000038954.15	novel	1508	12	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.4092776750862	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGAGTGGCCTGCTTTGT	NA	False	NA	24	True	AATAAA	-25	NA	45088102	45430175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45088316_45097496_45097598_45169138_45169307_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ES.15231.4	chr17	+	2392	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	80	-964	80	964	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGCCGAGGGGTTCT	NA	False	NA	NA	False	TATAAA	-24	NA	45088118	45431141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ES.15231.5	chr17	+	3531	5	ISM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	116	121877	-57	71556	5prime_fragment	FALSE	canonical	3	105	junction_3	9.2736184954957	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGTACAGATTATTAAG	NA	False	NA	NA	False	NA	NA	NA	45088154	45308300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203
ES.15231.6	chr17	+	8789	1	Antisense	novelGene_ENSMUSG00000039153.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	45123302	45132091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_45123300_45132100
ES.15231.7	chr17	+	3533	1	NIC	ENSMUSG00000038954.15	novel	1508	12	NA	NA	329116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCCTAGGGAGTGGC	NA	False	NA	15	True	AATAAA	-16	NA	45426633	45430166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45426600_45430200
ES.15232.1	chr17	-	130	1	Intergenic	novelGene_12708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	45106236	45106106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45106100_45106200
ES.15233.1	chr17	-	3103	1	Intergenic	novelGene_12709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAACAA	NA	False	NA	NA	False	AAAAAG	-26	NA	45141101	45137998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45138000_45141100
ES.15234.1	chr17	-	8194	1	Intergenic	novelGene_12710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCACTCACTGCTATCA	NA	False	NA	NA	False	NA	NA	NA	45186687	45178493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45178500_45186700
ES.15235.1	chr17	-	4492	1	Intergenic	novelGene_12711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTTAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	45223646	45219154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45219200_45223600
ES.15235.2	chr17	-	4297	1	Intergenic	novelGene_12712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAGAAAAGG	NA	False	NA	NA	False	AAGAAA	-29	NA	45223646	45219349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45219300_45223600
ES.15236.1	chr17	-	1950	1	Intergenic	novelGene_12713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGAGAGCATACACTAG	NA	False	NA	NA	False	NA	NA	NA	45242891	45240941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45240900_45242900
ES.15237.1	chr17	-	3863	1	Intergenic	novelGene_12714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGATTTTCTTAACGGGG	NA	False	NA	NA	False	NA	NA	NA	45373574	45369711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45369700_45373600
ES.15238.1	chr17	-	177	1	Intergenic	novelGene_12715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAATATGTGAG	NA	False	NA	NA	False	NA	NA	NA	45445467	45445290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45445300_45445500
ES.15239.1	chr17	-	146	1	Intergenic	novelGene_12716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATAATTCCTTTTT	2274	False	NA	NA	False	NA	NA	NA	45486409	45486263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45486300_45486400
ES.1524.1	chr1	+	255	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCCCAACAACCACATGA	NA	False	NA	NA	False	NA	NA	NA	143283115	143283370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_143283100_143283400
ES.15240.1	chr17	+	180	1	Intergenic	novelGene_12717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTAAGGTGGAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	45536745	45536925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45536700_45536900
ES.15241.1	chr17	-	346	1	Intergenic	novelGene_12718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGAGTTAGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	45696028	45695682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45695700_45696000
ES.15242.1	chr17	+	183	1	Intergenic	novelGene_12719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTTATG	1609	False	NA	NA	False	NA	NA	NA	45697036	45697219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45697000_45697200
ES.15243.1	chr17	+	148	1	Intergenic	novelGene_12720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAATAAATCTT	8976	False	NA	NA	False	NA	NA	NA	45708560	45708708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45708600_45708700
ES.15244.1	chr17	+	156	1	Intergenic	novelGene_12721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9814	False	NA	NA	False	NA	NA	NA	45709398	45709554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45709400_45709600
ES.15245.1	chr17	+	6160	2	Intergenic	novelGene_12722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAGAGAGAGAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	45730152	45791149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45736118_45790954
ES.15245.10	chr17	+	4492	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-7	-1907	6	-1358	multi-exon	FALSE	canonical	3	41	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATATGCATGATTGAA	NA	False	NA	NA	False	NA	NA	NA	45744783	45751130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45745154_45747008
ES.15245.11	chr17	+	5849	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-6	-3265	-6	0	multi-exon	FALSE	canonical	3	41	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45744784	45752488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45745154_45747008
ES.15245.12	chr17	+	6904	3	NNC	ENSMUSG00000097119.3	novel	4897	3	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTTGTGATTGTTTT	NA	False	NA	9	True	NA	NA	NA	45744787	45753465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45745154_45745732_45745814_45747008
ES.15245.13	chr17	+	6804	1	NIC	ENSMUSG00000097119.3	novel	4897	3	NA	NA	1874	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTGATTGTTTTTCT	NA	False	NA	12	True	NA	NA	NA	45746664	45753468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45746700_45753500
ES.15245.14	chr17	+	3155	1	Antisense	novelGene_ENSMUSG00000023935.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	219	False	NA	NA	False	NA	NA	NA	45758472	45761627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_45758500_45761600
ES.15245.15	chr17	+	6758	4	Antisense	novelGene_ENSMUSG00000023935.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTTAGTATTTACTGT	8792	False	NA	NA	False	AATAAA	-18	NA	45767045	45775799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_45767158_45767448_45772244_45773770_45773837_45774014
ES.15245.16	chr17	+	2586	1	Intergenic	novelGene_12723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45782616	45785202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45782600_45785200
ES.15245.2	chr17	+	10187	2	Antisense	novelGene_ENSMUSG00000023932.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACATCTTACCTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	45730802	45742240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_45735527_45736777
ES.15245.4	chr17	+	6783	3	FSM	ENSMUSG00000097119.3	ENSMUST00000233097.2	437	3	8	-6354	8	1	multi-exon	FALSE	canonical	0	0	junction_1	20.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGATTGTTTTTCTGCT	9924	False	NA	15	True	NA	NA	NA	45744531	45753471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45744634_45744935_45745154_45747008
ES.15245.5	chr17	+	7789	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-66	-5145	-32	898	multi-exon	FALSE	canonical	3	41	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTTTGGGATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	45744724	45754368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45745154_45747008
ES.15245.6	chr17	+	6882	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-57	-4247	-23	0	multi-exon	FALSE	canonical	3	41	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGATTGTTTTTCTGC	NA	False	NA	14	True	NA	NA	NA	45744733	45753470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45745154_45747008
ES.15245.7	chr17	+	6865	2	NNC	ENSMUSG00000097119.3	novel	4897	3	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGATTGTTTTTCTGC	NA	False	NA	14	True	NA	NA	NA	45744743	45753470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45745154_45747015
ES.15245.8	chr17	+	6321	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	-11	-3732	2	467	multi-exon	FALSE	canonical	3	41	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGGTGGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	45744779	45752955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45745154_45747008
ES.15245.9	chr17	+	1477	3	NNC	ENSMUSG00000097119.3	novel	2971	3	NA	NA	6	-932	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	17.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGAAATTAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	45744783	45748291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45745154_45747008_45747151_45747326
ES.15246.1	chr17	-	6783	17	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	4145	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	176.373183902769	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTGTGTGTATTTGT	2371	False	NA	-3	True	NA	NA	NA	45744476	45698664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45700093_45700294_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.10	chr17	-	3969	15	NIC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	561	junction_8	75.9585010222755	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTAGCCTTTTGTTTG	2371	False	NA	-4	True	AATAAA	-18	NA	45744476	45702811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.11	chr17	-	2825	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	85	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	177.374882350599	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTAGCCTTTTGTTT	2269	False	NA	-5	True	AATAAA	-17	NA	45744578	45702812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715633_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.14	chr17	-	3711	15	NIC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	1	-3	intron_retention	FALSE	canonical	3	561	junction_8	59.5613215132788	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTAGCCTTTTGTTT	2185	False	NA	-5	True	AATAAA	-17	NA	45744662	45702812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.18	chr17	-	5142	15	NIC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	561	junction_8	77.2190430673995	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTAGCCTTTTGTTT	2348	False	NA	-5	True	AATAAA	-17	NA	45744499	45702812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.19	chr17	-	2890	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.315008696928	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTAGCCTTTTGTTT	2372	False	NA	-5	True	AATAAA	-17	NA	45744475	45702812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703285_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.2	chr17	-	6930	17	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	39	4143	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	176.373183902769	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGTGTGTGTATTT	2223	False	NA	-5	True	NA	NA	NA	45744624	45698666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45700086_45700286_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.20	chr17	-	2791	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	181.678543954242	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	2399	False	NA	-10	True	AATAAA	-12	NA	45744448	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718948_45719257_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.21	chr17	-	2286	13	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	7582	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	199.268715139465	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	9962	False	NA	-10	True	AATAAA	-12	NA	45736885	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724147_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777
ES.15246.22	chr17	-	2582	15	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	188.246798492981	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	2371	False	NA	-10	True	AATAAA	-12	NA	45744476	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736888_45738934_45738969_45744316
ES.15246.24	chr17	-	2810	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	182.110540301458	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	2371	False	NA	-10	True	AATAAA	-12	NA	45744476	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736893_45737454_45737608_45738864_45738969_45744316
ES.15246.26	chr17	-	2913	17	NIC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	20	-8	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	227.303898998675	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	2400	False	NA	-10	True	AATAAA	-12	NA	45744447	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45723450_45723561_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.27	chr17	-	2801	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	21	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	181.804534841375	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	2401	False	NA	-10	True	AATAAA	-12	NA	45744446	45702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730751_45735432_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.29	chr17	-	3131	17	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	1	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	271.474266448498	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGAGTGTAGCCT	2185	False	NA	-12	True	AATAAA	-10	NA	45744662	45702819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726687_45727870_45728016_45730052_45730149_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.32	chr17	-	3184	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	228	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	180.691068462783	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTGAGTGTAGCCT	2608	False	NA	-12	True	AATAAA	-10	NA	45744239	45702819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45743725
ES.15246.34	chr17	-	1558	8	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	2459	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	262.117593177301	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAAAAAGAACATGTGA	9694	False	NA	-29	True	AGTAAA	-5	NA	45724151	45702836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721858_45722749_45722917_45724047
ES.15246.35	chr17	-	2798	16	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	180.691068462783	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTGAATAAAAAGAACATG	2371	False	NA	-32	True	AGTAAA	-2	NA	45744476	45702839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744328
ES.15246.4	chr17	-	3123	18	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	52	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	288.568990509613	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGCCTTTTGTTTGAAG	2236	False	NA	-1	True	AATAAA	-21	NA	45744611	45702808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45723450_45723561_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738611_45738649_45738864_45738969_45744316
ES.15246.5	chr17	-	3059	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	-31	-1	-31	1	multi-exon	FALSE	canonical	3	561	junction_9	75.0022221893014	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGCCTTTTGTTTGAAG	2153	False	NA	-1	True	AATAAA	-21	NA	45744694	45702808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15246.9	chr17	-	2964	17	NNC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	228.093859175888	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTAGCCTTTTGTTTG	2371	False	NA	-4	True	AATAAA	-18	NA	45744476	45702811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722933_45723450_45723561_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ES.15247.1	chr17	-	6157	8	NIC	ENSMUSG00000023935.11	novel	1744	6	NA	NA	9	4354	intron_retention	FALSE	canonical	1	2	junction_1	7.59161728890653	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGTCTGGACTAGAAG	NA	False	NA	NA	False	NA	NA	NA	45785781	45747149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45752485_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ES.15247.10	chr17	-	3532	6	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	13204	-484	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	9.46572765295939	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCTGAGACATAACATG	NA	False	NA	NA	False	CATAAA	-39	NA	45772548	45757289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45765016_45765138_45768083_45768246_45772087_45772237_45772392
ES.15247.11	chr17	-	1396	5	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	13205	559	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	11.5542200082913	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTTTAATTTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	45772547	45759303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45768083_45768246_45772087_45772237_45772392
ES.15247.12	chr17	-	674	5	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	19144	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	7.8541390362025	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCCTCTCCCATGGTA	NA	False	NA	NA	False	TATAAA	-21	NA	45766608	45759862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45766489
ES.15247.13	chr17	-	1358	8	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	9343	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.51409395757219	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGCCTCTCCCATGGT	NA	False	NA	NA	False	TATAAA	-20	NA	45776409	45759863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45776070
ES.15247.14	chr17	-	948	4	NIC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	13248	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	10.6770782520313	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTAGCCTCTCCCATGG	NA	False	NA	NA	False	TATAAA	-19	NA	45772504	45759864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45760118_45760360_45760477_45768083_45768246_45772087
ES.15247.15	chr17	-	980	7	NIC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	-1	-44	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	7.28010988928052	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAGTTGCACTGATTA	NA	False	NA	NA	False	NA	NA	NA	45785791	45759906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45760118_45760360_45760477_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ES.15247.2	chr17	-	1115	5	NNC	ENSMUSG00000023935.11	novel	1744	6	NA	NA	13211	-442	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.5524865872714	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGGAGGAAATGGT	NA	False	NA	NA	False	NA	NA	NA	45772541	45751945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45752485_45760360_45760477_45768083_45768246_45772087_45772237_45772392
ES.15247.3	chr17	-	4483	8	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	1341	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.51409395757219	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGTAATATGGTATT	NA	False	NA	NA	False	NA	NA	NA	45784411	45756802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45784008
ES.15247.4	chr17	-	4144	7	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	1617	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	9.55103252126293	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGTAATATGGTATT	NA	False	NA	NA	False	NA	NA	NA	45784135	45756802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45784008
ES.15247.5	chr17	-	4158	8	FSM	ENSMUSG00000023935.11	ENSMUST00000024731.9	1160	8	60	-3058	1	1	multi-exon	FALSE	canonical	2	8	junction_7	6.20730313782869	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTGTAATATGGTA	NA	False	NA	NA	False	NA	NA	NA	45785804	45756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ES.15247.6	chr17	-	3887	5	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	13213	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	11.5542200082913	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTGTAATATGGTA	NA	False	NA	NA	False	NA	NA	NA	45772539	45756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45768083_45768246_45772087_45772237_45772392
ES.15247.7	chr17	-	1025	8	FSM	ENSMUSG00000023935.11	ENSMUST00000233553.2	997	8	-31	3	7	-3	multi-exon	FALSE	canonical	2	8	junction_7	5.17450579322138	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTTTTGTAATAT	NA	False	NA	NA	False	NA	NA	NA	45785783	45756808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45757010_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ES.15247.8	chr17	-	524	3	NIC	ENSMUSG00000023935.11	novel	975	7	NA	NA	17462	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	8	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTTTTGTAATAT	NA	False	NA	NA	False	NA	NA	NA	45768290	45756808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45757010_45760360_45760477_45768083
ES.15247.9	chr17	-	4365	10	NNC	ENSMUSG00000023935.11	novel	1160	8	NA	NA	1293	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.3865851328506	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAATGTTTTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	45784459	45756810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45774602_45774713_45775352_45775507_45779129_45779211_45784357
ES.15248.1	chr17	+	3586	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-24	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	45.491620107444	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817742	45831769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.10	chr17	+	5020	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	1	-1672	1	1672	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTATTAACTCCGAAG	NA	False	NA	NA	False	NA	NA	NA	45817767	45833441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.11	chr17	+	3483	21	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-12	intron_retention	FALSE	canonical	3	146	junction_7	22.9575695577733	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTGTATGTGTGTG	NA	False	NA	7	True	AATACA	-21	NA	45817767	45831757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.12	chr17	+	3531	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.2882307688991	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTGTGTGTG	NA	False	NA	17	True	AATACA	-31	NA	45817767	45831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820504_45820614_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.13	chr17	+	3454	21	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	146	junction_8	22.6434869222918	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	18	True	AATACA	-32	NA	45817767	45831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830741_45831211
ES.15248.14	chr17	+	4325	20	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-12	intron_retention	TRUE	non_canonical	0	0	junction_19	47.6990217499298	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTGTATGTGTGTG	NA	False	NA	7	True	AATACA	-21	NA	45817767	45831757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829892_45830438_45830523_45830629_45831043_45831092
ES.15248.15	chr17	+	3421	20	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.3554804062516	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTGTGTGTG	NA	False	NA	17	True	AATACA	-31	NA	45817767	45831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.16	chr17	+	3351	21	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-144	intron_retention	FALSE	canonical	3	146	junction_7	22.9575695577733	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGACTTGGCTCAGTG	NA	False	NA	4	True	AATAAA	-14	NA	45817767	45831625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.17	chr17	+	3443	20	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	61.1101815872675	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45817767	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828803_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.18	chr17	+	3424	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-145	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	60.4222434207801	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGAGACTTGGCTCAGT	NA	False	NA	3	True	AATAAA	-13	NA	45817767	45831624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.19	chr17	+	3228	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.4287623705279	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTGTGTG	NA	False	NA	15	True	AATACA	-29	NA	45817767	45831765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825557_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.2	chr17	+	3454	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	-16	-89	-16	89	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAAGTGCCCTGTGTGC	NA	False	NA	108	True	AAAAAG	-17	NA	45817750	45831858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.20	chr17	+	5004	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	1128	intron_retention	FALSE	non_canonical	0	0	junction_20	47.4576390057491	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACGTGCCCCAAGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	45817767	45832897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45831043_45831092
ES.15248.22	chr17	+	3334	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	1	14	1	-14	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45817767	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.24	chr17	+	3259	22	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.4936640576219	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTGTATGTGTGTG	NA	False	NA	7	True	AATACA	-21	NA	45817767	45831757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829563_45829833_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.25	chr17	+	3728	20	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	1	-141	intron_retention	FALSE	canonical	3	146	junction_7	23.4688453827858	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTTGGCTCAGTGGTT	NA	False	NA	7	True	AATAAA	-17	NA	45817767	45831628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825820_45826170_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.26	chr17	+	3907	20	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	4	-14	intron_retention	FALSE	canonical	2	3	junction_12	47.2232277697875	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45817770	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.27	chr17	+	4685	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	5	1128	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	45.491620107444	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACGTGCCCCAAGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	45817771	45832897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.28	chr17	+	3831	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	5	-128	intron_retention	FALSE	non_canonical	0	0	junction_20	46.4974192832247	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTAAGAGCACTTGTT	NA	False	NA	20	True	AATAAA	-30	NA	45817771	45831641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829892_45830438_45830523_45830629_45831027_45831076
ES.15248.29	chr17	+	5135	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	10	1128	intron_retention	FALSE	non_canonical	0	0	junction_20	61.5663057199309	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACGTGCCCCAAGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	45817776	45832897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45831027_45831076
ES.15248.3	chr17	+	4493	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	-16	-1128	-16	1128	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACGTGCCCCAAGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	45817750	45832897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.30	chr17	+	3925	20	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	10	-1	intron_retention	FALSE	canonical	3	10	junction_6	46.6724900732743	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	18	True	AATACA	-32	NA	45817776	45831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.33	chr17	+	3619	22	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	10	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.2901018116947	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTGTATGTGTGTG	NA	False	NA	7	True	AATACA	-21	NA	45817776	45831757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45824364_45824444_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.34	chr17	+	3438	24	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	19	56228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	58.3066983931068	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGTCCTCTGCAAGAG	NA	False	NA	NA	False	NA	NA	NA	45817785	45887997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211_45831765_45874566_45874625_45887942
ES.15248.35	chr17	+	4319	21	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	43	1124	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	47.4576390057491	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTAGCACGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	45817809	45832893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45831211
ES.15248.36	chr17	+	3972	24	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	50	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.3921943691147	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTGGTGTATGTGTGT	NA	False	NA	6	True	AATACA	-20	NA	45817816	45831756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45821766_45821963_45822490_45822585_45823366_45823499_45825417_45825564_45825848_45826210_45826329_45826438_45826870_45827060_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.37	chr17	+	3134	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	280	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.3553268409426	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45818046	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818087_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.38	chr17	+	3004	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	320	-139	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	45.0490788044971	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGGCTCAGTGGTTAA	NA	False	NA	9	True	AATAAA	-19	NA	45818086	45831630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.40	chr17	+	3112	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	337	-14	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	45.0490788044971	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45818103	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.41	chr17	+	3324	21	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	338	-14	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	59.3375724141121	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45818104	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.42	chr17	+	4261	22	NNC	ENSMUSG00000023938.9	novel	2956	11	NA	NA	338	1128	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	59.137834308605	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCACGTGCCCCAAGGT	NA	False	NA	NA	False	TTTAAA	-1	NA	45818104	45832897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818122_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.43	chr17	+	3373	21	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	410	3	410	-3	3prime_fragment	FALSE	canonical	3	146	junction_7	22.5620810210406	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTGTGTGTGTGTGT	NA	False	NA	16	True	AATACA	-30	NA	45818176	45831766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.44	chr17	+	2973	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	803	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.7572217929688	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTGTGTGTGTGT	NA	False	NA	14	True	AATACA	-28	NA	45818569	45831764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818637_45819406_45819553_45819792_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828764_45828847_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.46	chr17	+	2741	17	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	2098	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.1838322064411	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACAATAATTTGGTG	NA	False	NA	-3	True	AATACA	-11	NA	45819864	45831747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45819959_45820321_45820467_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.47	chr17	+	2591	18	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	2552	14	2552	-14	3prime_fragment	FALSE	canonical	3	146	junction_4	24.3965225271694	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45820318	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.48	chr17	+	5624	15	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-1089	1119	intron_retention	FALSE	non_canonical	0	0	junction_14	56.0439423076906	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATTTAGCACGTG	NA	False	NA	NA	False	NA	NA	NA	45824065	45832888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45831043_45831092
ES.15248.49	chr17	+	3044	17	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-338	-22	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	52.0294387822894	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACAATAATTTGGTG	NA	False	NA	-3	True	AATACA	-11	NA	45824816	45831747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828230_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.5	chr17	+	3229	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	-10	130	-10	-130	multi-exon	FALSE	canonical	3	146	junction_8	22.4045468336421	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTTAAGAGCACTTG	NA	False	NA	18	True	AATAAA	-28	NA	45817756	45831639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.50	chr17	+	3094	13	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-243	-14	intron_retention	FALSE	canonical	3	146	junction_1	25.0381653126227	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45826109	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629
ES.15248.51	chr17	+	2629	3	ISM	ENSMUSG00000023949.8	ENSMUST00000233588.2	2885	4	1631	-3	1631	3	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGAATTGCTTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	45845609	45853609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45846238_45850565_45851016_45852058
ES.15248.52	chr17	+	2454	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	-22	3	-22	0	multi-exon	FALSE	canonical	3	12	junction_2	2.44948974278318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTGGTTATACGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	45866606	45874092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
ES.15248.53	chr17	+	2381	6	FSM	ENSMUSG00000023947.9	ENSMUST00000233929.2	2356	6	-25	0	-17	0	multi-exon	FALSE	canonical	0	0	junction_5	6.59090282131363	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTGGTTATACGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	45866611	45874092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872995
ES.15248.54	chr17	+	4579	9	Fusion	ENSMUSG00000023947.9_ENSMUSG00000037089.12	novel	2435	6	NA	NA	-6	0	multi-exon	FALSE	canonical	0	0	junction_6	174.624194701078	217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45866622	45878597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927_45874522_45875505_45875700_45875850_45876006_45877234
ES.15248.56	chr17	+	1842	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	64	0	-10	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTTTGGTTGGCAT	NA	False	NA	9	True	ATTAAA	-19	NA	45874863	45878596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ES.15248.57	chr17	+	1992	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	64	-150	-10	149	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAATAAAACAAACAAAAA	NA	False	NA	NA	False	TATAAA	-40	NA	45874863	45878746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ES.15248.58	chr17	+	3059	3	ISM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	75	1	1	0	intron_retention	FALSE	canonical	3	433	junction_1	0.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874874	45878595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45874995_45875505_45875700_45875850
ES.15248.59	chr17	+	3889	1	Genic_Genomic	ENSMUSG00000037089.12	novel	NA	NA	NA	NA	-6	171	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAATACATAACACCCAA	NA	False	NA	NA	False	NA	NA	NA	45874879	45878768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_45874900_45878800
ES.15248.6	chr17	+	3587	21	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-8	-144	intron_retention	FALSE	canonical	3	146	junction_8	22.8755327806808	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGACTTGGCTCAGTG	NA	False	NA	4	True	AATAAA	-14	NA	45817758	45831625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.60	chr17	+	3716	1	NIC	ENSMUSG00000037089.12	novel	1906	4	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874879	45878595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45874900_45878600
ES.15248.61	chr17	+	1974	3	NIC	ENSMUSG00000037089.12	novel	1906	4	NA	NA	-4	0	intron_retention	FALSE	canonical	3	396	junction_2	18.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874881	45878595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45874995_45875505_45876006_45877234
ES.15248.62	chr17	+	852	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	-3	1	-3	-1	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAGCCAGCTCTAATG	NA	False	NA	6	True	AATAAA	-15	NA	45874882	45876980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
ES.15248.64	chr17	+	2484	2	NIC	ENSMUSG00000037089.12	novel	2326	3	NA	NA	-3	0	intron_retention	FALSE	canonical	3	396	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874882	45878595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45876006_45877234
ES.15248.65	chr17	+	1700	4	NNC	ENSMUSG00000037089.12	novel	1906	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.247009885218	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874885	45878595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45874995_45875624_45875700_45875850_45876006_45877234
ES.15248.66	chr17	+	3197	2	FSM	ENSMUSG00000037089.12	ENSMUST00000225226.2	361	2	16	-2852	0	0	multi-exon	FALSE	canonical	3	433	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45874889	45878597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45874995_45875505
ES.15248.67	chr17	+	3221	3	ISM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	94	-180	4	179	intron_retention	FALSE	canonical	3	433	junction_1	0.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACACCCAACCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	45874893	45878776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45874995_45875505_45875700_45875850
ES.15248.69	chr17	+	679	4	NIC	ENSMUSG00000037089.12	novel	1906	4	NA	NA	26	2	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	193.511986421743	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGCTTCCCACATTAT	NA	False	NA	NA	False	NA	NA	NA	45874915	45876376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45874995_45875505_45875700_45875850_45876006_45876125
ES.15248.70	chr17	+	1148	3	ISM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	212	1	-33	-1	3prime_fragment	FALSE	canonical	3	37	junction_2	198.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAGCCAGCTCTAATG	NA	False	NA	6	True	AATAAA	-15	NA	45875097	45876980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45875700_45875850_45876006_45876589
ES.15248.71	chr17	+	2293	2	NIC	ENSMUSG00000037089.12	novel	2326	3	NA	NA	92	147	intron_retention	FALSE	canonical	3	396	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAACAAACAAA	NA	False	NA	NA	False	TATAAA	-38	NA	45875222	45878744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_45876006_45877234
ES.15248.72	chr17	+	3043	2	ISM	ENSMUSG00000037089.12	ENSMUST00000223987.2	1766	4	273	0	-261	0	intron_retention	FALSE	canonical	3	434	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTGGTTGGCATT	NA	False	NA	10	True	ATTAAA	-20	NA	45875403	45878597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45875700_45875850
ES.15248.8	chr17	+	3628	24	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	-3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.4483992861726	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGGTGTATGTGTG	NA	False	NA	5	True	AATACA	-19	NA	45817763	45831755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45821766_45821963_45822490_45822585_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ES.15248.9	chr17	+	3808	21	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	12	0	-12	intron_retention	FALSE	canonical	3	146	junction_8	22.9436265659987	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGTGTATGTGTGTG	NA	False	NA	7	True	AATACA	-21	NA	45817766	45831757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629
ES.15249.1	chr17	-	207	1	Intergenic	novelGene_12724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACCTTCACTCAGCC	7699	False	NA	NA	False	AAGAAA	-11	NA	45821168	45820961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45821000_45821200
ES.1525.1	chr1	+	996	2	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGGGCCAAATCTATAG	NA	False	NA	NA	False	NA	NA	NA	143415087	143534477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_143415150_143533543
ES.1525.2	chr1	+	7440	1	Antisense	novelGene_ENSMUSG00000026361.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTTAAACATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	143482148	143489588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_143482100_143489600
ES.1525.3	chr1	+	2220	1	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGGGCCAAATCTATAG	NA	False	NA	NA	False	NA	NA	NA	143532257	143534477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_143532300_143534500
ES.15250.1	chr17	-	5756	2	ISM	ENSMUSG00000096847.3	ENSMUST00000180252.3	4839	3	1161	3	1161	-3	3prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGCTCCCTCAGTGAC	NA	False	NA	-14	True	AATAAA	-17	NA	45859442	45852880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45856881_45857686
ES.15250.2	chr17	-	3409	2	NNC	ENSMUSG00000096847.3	novel	4839	3	NA	NA	3737	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGCTCCCTCAGTGAC	NA	False	NA	-14	True	AATAAA	-17	NA	45856866	45852880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45853466_45854042
ES.15250.3	chr17	-	4047	1	NIC	ENSMUSG00000096847.3	novel	4839	3	NA	NA	3675	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGCTCCCTCAGTGA	NA	False	NA	-15	True	AATAAA	-16	NA	45856928	45852881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45852900_45856900
ES.15250.4	chr17	-	4858	3	FSM	ENSMUSG00000096847.3	ENSMUST00000180252.3	4839	3	-24	5	-24	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTCTGCTCCCTCAGTG	NA	False	NA	-16	True	AATAAA	-15	NA	45860627	45852882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45856881_45857686_45858128_45860208
ES.15251.1	chr17	-	2631	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	-94	-17	-94	17	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCAGGGCTTCCTGAG	NA	False	NA	-7	True	AATAAA	-36	NA	45884291	45878683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.10	chr17	-	3992	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	196	0	intron_retention	FALSE	canonical	3	9221	junction_4	1098.28945837379	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45883983	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.13	chr17	-	2565	11	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	39	junction_10	3285.34709886185	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45883509	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883359
ES.15251.14	chr17	-	2510	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	3270.0116223035	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884193	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879479_45879779_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.15	chr17	-	2608	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	9263	junction_8	946.978482814462	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884203	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.16	chr17	-	2417	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	0	intron_retention	FALSE	canonical	2	72	junction_9	3282.20513679447	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884187	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882453_45882690_45882838_45884092
ES.15251.17	chr17	-	4069	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	9221	junction_3	1087.2998594569	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884196	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.18	chr17	-	2805	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-30	0	intron_retention	FALSE	canonical	3	9221	junction_3	964.164405067932	6280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45882538	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45881493_45881591_45881726_45881943_45882104_45882338
ES.15251.19	chr17	-	3818	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	80	0	intron_retention	FALSE	canonical	3	9221	junction_2	1024.40493566862	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45883401	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.2	chr17	-	2619	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	3	intron_retention	FALSE	canonical	3	9221	junction_4	999.096159437353	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTCCTTGTAACACT	NA	False	NA	-21	True	AATAAA	-22	NA	45884194	45878697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.21	chr17	-	3024	8	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	9221	junction_2	921.095222093387	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884194	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.22	chr17	-	2503	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_6	3303.74860423731	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884186	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881487_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.25	chr17	-	1585	7	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	873	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4182.78004641251	6280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45881635	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880696_45881352_45881493_45881591
ES.15251.27	chr17	-	2750	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-134	-2	intron_retention	FALSE	canonical	3	106	junction_10	3266.17492642387	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCTGCTCTCCTTGTA	NA	False	NA	-26	True	AATAAA	-17	NA	45883615	45878702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883278
ES.15251.28	chr17	-	3762	10	ISM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	10	3	-6	-3	intron_retention	FALSE	canonical	3	9221	junction_4	1036.97658818531	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCCTGCTCTCCTTGT	NA	False	NA	-27	True	AATAAA	-16	NA	45884187	45878703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.3	chr17	-	2731	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	2	intron_retention	FALSE	canonical	3	9221	junction_3	888.407845530419	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTCTCCTTGTAACAC	NA	False	NA	-22	True	AATAAA	-21	NA	45884194	45878698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.30	chr17	-	2536	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-41	-4	intron_retention	FALSE	canonical	0	0	junction_5	3292.62509405489	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884238	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880732_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.33	chr17	-	2451	12	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	3150.19722588657	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884192	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881387_45881446_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.36	chr17	-	2626	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-4	intron_retention	FALSE	canonical	3	9221	junction_3	869.284735065148	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884194	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.37	chr17	-	4647	5	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	9221	junction_2	1066.8686364778	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884186	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45880753_45881183_45881726_45881943
ES.15251.39	chr17	-	4140	8	ISM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	11	4	-5	-4	intron_retention	FALSE	canonical	3	9221	junction_4	1054.14470601739	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884186	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943
ES.15251.4	chr17	-	4082	8	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-48	1	intron_retention	FALSE	canonical	3	9221	junction_3	893.646416860352	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTCTCCTTGTAACA	NA	False	NA	-23	True	AATAAA	-20	NA	45884245	45878699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338
ES.15251.40	chr17	-	2513	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	3302.60490522254	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884187	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880321_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.42	chr17	-	2518	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	6	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	3190.84402783966	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884191	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880157_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.43	chr17	-	2511	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	114	-4	intron_retention	FALSE	canonical	3	11	junction_10	3293.36262807484	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884065	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883965
ES.15251.47	chr17	-	2534	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-4	intron_retention	FALSE	canonical	2	5	junction_10	3295.0804906709	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884194	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882859_45884092
ES.15251.48	chr17	-	2497	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	3180.35355896164	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	False	NA	-28	True	AATAAA	-15	NA	45884194	45878704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879170_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.50	chr17	-	2715	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-90	-5	intron_retention	FALSE	canonical	3	9221	junction_2	902.540750080325	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTCCTGCTCTCCTT	NA	False	NA	-29	True	AATAAA	-14	NA	45882598	45878705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338
ES.15251.51	chr17	-	4555	6	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-5	intron_retention	FALSE	canonical	3	9221	junction_2	1027.52331360412	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTCCTGCTCTCCTT	NA	False	NA	-29	True	AATAAA	-14	NA	45884194	45878705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943
ES.15251.52	chr17	-	3891	1	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-88	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTCCTGCTCTCCTT	NA	False	NA	-29	True	AATAAA	-14	NA	45882596	45878705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45878700_45882600
ES.15251.53	chr17	-	3471	6	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-6	intron_retention	FALSE	canonical	3	9221	junction_2	1083.19538403743	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACAGTCCTGCTCTCCT	NA	False	NA	-30	True	AATAAA	-13	NA	45884194	45878706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45880753_45881183_45882546_45882690_45882838_45884092
ES.15251.54	chr17	-	2945	8	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	9221	junction_3	947.888781902784	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATACAGTCCTGCTCT	NA	False	NA	-33	True	AATAAA	-10	NA	45884184	45878709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881726_45881943_45882546_45882690_45882838_45884092
ES.15251.56	chr17	-	4261	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-18	intron_retention	FALSE	canonical	3	9221	junction_2	993.896372867916	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCAGTTTTATACAG	NA	False	NA	37	True	AATAAA	-1	NA	45884194	45878718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.57	chr17	-	3145	8	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	-18	intron_retention	FALSE	canonical	3	9221	junction_2	598.683658077435	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCAGTTTTATACAG	NA	False	NA	37	True	AATAAA	-1	NA	45884192	45878718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879489_45879783_45880314_45880395_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.6	chr17	-	2503	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_9	3302.97381158253	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884186	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882540_45882690_45882838_45884092
ES.15251.60	chr17	-	2484	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	-18	intron_retention	FALSE	canonical	1	14	junction_5	3288.61861729207	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCAGTTTTATACAG	NA	False	NA	37	True	AATAAA	-1	NA	45884192	45878718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880740_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.62	chr17	-	2684	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-3	-18	intron_retention	FALSE	canonical	3	9263	junction_7	833.040365168459	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCAGTTTTATACAG	NA	False	NA	37	True	AATAAA	-1	NA	45884184	45878718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.63	chr17	-	3758	5	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	-23	intron_retention	FALSE	canonical	3	9221	junction_1	567.037201160559	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAGATGCAGTTTTA	NA	False	NA	32	True	ATTAAA	-11	NA	45884181	45878723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45880314_45880395_45881726_45881943_45882546_45882690_45882838_45884092
ES.15251.65	chr17	-	3151	5	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-85	-26	intron_retention	FALSE	canonical	3	9617	junction_3	930.82446653491	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45882593	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45881493_45881591_45881726_45881943
ES.15251.66	chr17	-	5315	2	ISM	ENSMUSG00000023944.15	ENSMUST00000130406.2	351	3	-705	-3737	-5	-26	intron_retention	FALSE	canonical	3	9263	junction_1	0	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45882546_45882690
ES.15251.67	chr17	-	2507	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-26	intron_retention	FALSE	non_canonical	0	0	junction_3	3190.84402783966	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880077_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.68	chr17	-	2489	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	1	-26	intron_retention	FALSE	non_canonical	0	0	junction_8	3295.6876080721	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884196	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882098_45882336_45882546_45882690_45882838_45884092
ES.15251.70	chr17	-	2470	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-26	intron_retention	FALSE	canonical	0	0	junction_10	3296.5121097912	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882825_45884092
ES.15251.71	chr17	-	4704	5	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	-26	intron_retention	FALSE	canonical	3	9263	junction_4	1050.06699191052	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884192	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45881726_45881943_45882546_45882690
ES.15251.72	chr17	-	2120	10	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3473.43221583849	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884187	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882014_45882757_45882838_45884092
ES.15251.73	chr17	-	1829	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	5	-26	intron_retention	FALSE	non_canonical	0	0	junction_2	4789.58786953533	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884192	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879278_45880183_45880321_45880443_45880480_45880600_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.74	chr17	-	2914	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-26	intron_retention	FALSE	canonical	3	9221	junction_4	1040.76403559009	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.76	chr17	-	2234	10	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	4	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3452.87355726634	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884193	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45882434_45882546_45882690_45882838_45884092
ES.15251.77	chr17	-	3126	8	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-26	intron_retention	FALSE	canonical	3	9221	junction_3	949.685275472343	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.79	chr17	-	2735	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-26	intron_retention	FALSE	canonical	3	9221	junction_4	943.504761183005	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884194	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882838_45884092
ES.15251.8	chr17	-	2735	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	9221	junction_4	1041.4460507118	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884194	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.81	chr17	-	1609	9	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	-26	intron_retention	FALSE	non_canonical	0	0	junction_2	3511.40512295292	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884187	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879223_45880587_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.82	chr17	-	3085	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-26	intron_retention	FALSE	canonical	3	9263	junction_5	436.726745230928	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884194	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.83	chr17	-	2485	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	3	-26	intron_retention	FALSE	canonical	0	0	junction_1	3180.35355896164	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884194	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879160_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15251.84	chr17	-	2829	9	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-3	-26	intron_retention	FALSE	canonical	3	9221	junction_3	921.695643569503	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884184	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882546_45882690_45882838_45884092
ES.15251.86	chr17	-	3995	3	NIC	ENSMUSG00000023944.15	novel	703	6	NA	NA	3	-26	intron_retention	FALSE	canonical	3	10174	junction_2	174.5	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884194	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45881726_45881943_45882838_45884092
ES.15251.87	chr17	-	1967	6	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	795	-26	intron_retention	FALSE	canonical	3	9221	junction_3	1013.70224425124	6280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45881713	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591
ES.15251.9	chr17	-	2517	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-329	0	intron_retention	FALSE	canonical	0	0	junction_10	3296.5121097912	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45883810	45878700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883708
ES.15251.90	chr17	-	2476	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-5	-26	intron_retention	FALSE	non_canonical	0	0	junction_8	3295.6876080721	6281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGAAGATGCAGTT	NA	False	NA	29	True	ATTAAA	-8	NA	45884186	45878726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882345_45882546_45882690_45882838_45884092
ES.15251.92	chr17	-	4039	7	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	-6	-42	intron_retention	FALSE	canonical	3	9221	junction_2	632.918833658788	6281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAGTATGCAAAA	NA	False	NA	13	True	NA	NA	NA	45884187	45878742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45879489_45879783_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690
ES.15251.94	chr17	-	913	6	ISM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	11	2621	-5	49	5prime_fragment	FALSE	canonical	3	9263	junction_4	453.58333302713	5813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGTACATTGACCAGGA	NA	False	NA	34	True	NA	NA	NA	45884186	45881321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ES.15252.1	chr17	-	2093	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-470	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	708.687252108979	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTGAGTCTAGGTTTC	NA	False	NA	53	True	NA	NA	NA	45907353	45896071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45907323
ES.15252.10	chr17	-	2195	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906594	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.100	chr17	-	1853	15	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	653.965614929565	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906475	45896132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896210_45896420_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.101	chr17	-	3356	15	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	992.103724930215	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45906455	45896132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45898691_45898805_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45905214
ES.15252.102	chr17	-	3255	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-146	-4	intron_retention	FALSE	canonical	1	1	junction_12	879.759811223374	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATAGCTCTGTGCATCC	NA	False	NA	-8	True	AATAAA	-11	NA	45910678	45896132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45904161_45904257_45904359_45910398
ES.15252.104	chr17	-	2312	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-603	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	708.687252108979	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATAGCTCTGTGCATC	NA	False	NA	-9	True	AATAAA	-10	NA	45908595	45896133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45908284
ES.15252.105	chr17	-	2755	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_11	678.691935310532	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATAGCTCTGTGCATC	NA	False	NA	-9	True	AATAAA	-10	NA	45906470	45896133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903270_45904257_45904359_45906407
ES.15252.106	chr17	-	157	1	Intergenic	novelGene_12725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAACCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	45897982	45897825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45897800_45898000
ES.15252.107	chr17	-	1064	10	FSM	ENSMUSG00000023942.16	ENSMUST00000164217.8	1062	10	76	-78	-11	77	multi-exon	FALSE	canonical	3	1063	junction_1	471.854968301819	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTGGGCCCGGGGTGTC	NA	False	NA	NA	False	NA	NA	NA	45906452	45899214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.108	chr17	-	844	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	54	-282	54	-1	multi-exon	FALSE	canonical	3	164	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	45912838	45911897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45912612_45912708
ES.15252.109	chr17	-	786	2	FSM	ENSMUSG00000079471.5	ENSMUST00000208801.2	437	2	32	-381	28	-1	multi-exon	FALSE	canonical	3	33	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	45912864	45911897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45912612_45912792
ES.15252.11	chr17	-	1970	12	NIC	ENSMUSG00000023942.16	novel	2033	13	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	2	106	junction_11	733.696167439699	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45910544	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45910398
ES.15252.110	chr17	-	869	1	NIC	ENSMUSG00000079471.5	novel	804	2	NA	NA	126	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	45912766	45911897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45911900_45912800
ES.15252.111	chr17	-	752	2	NNC	ENSMUSG00000079471.5	novel	804	2	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	45913004	45911897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45912612_45912966
ES.15252.12	chr17	-	1990	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	-2	0	-1	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906496	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.14	chr17	-	2210	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	3	-1	intron_retention	FALSE	canonical	2	40	junction_12	687.715112811176	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906826	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906720
ES.15252.15	chr17	-	3257	12	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	724.376528727913	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900006_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45904359_45906407
ES.15252.16	chr17	-	5187	12	FSM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	-2972	1	-4	-1	multi-exon	FALSE	canonical	3	1453	junction_5	300.974423009307	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906473	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ES.15252.17	chr17	-	4121	13	ISM	ENSMUSG00000023942.16	ENSMUST00000167692.8	2092	14	-1905	-1	-2	-1	intron_retention	FALSE	canonical	3	1063	junction_5	386.785784453818	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906471	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.18	chr17	-	2313	15	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	844.979811979589	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906494	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45905214_45905439_45906407
ES.15252.19	chr17	-	4361	13	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	12	-1	intron_retention	FALSE	canonical	3	50	junction_12	685.341561234656	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903450_45904257
ES.15252.21	chr17	-	2367	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1063	junction_4	411.127480905322	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.22	chr17	-	2002	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	-4	-2	-4	-1	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906502	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.23	chr17	-	2909	12	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	1762	junction_11	224.480999214331	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906451	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.24	chr17	-	2928	11	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1762	junction_10	204.640196442439	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.26	chr17	-	2100	12	Fusion	ENSMUSG00000079471.5_ENSMUSG00000023942.16	novel	2216	12	NA	NA	536	-1	multi-exon	FALSE	canonical	0	0	junction_11	721.038151923271	1433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45912356	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45912074
ES.15252.28	chr17	-	2228	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1063	junction_5	409.470050458177	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906495	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.29	chr17	-	2076	14	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	863.489624350488	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906493	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901254_45903101_45903188_45904261_45904359_45906407
ES.15252.3	chr17	-	2149	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	1453	junction_5	311.5369990469	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCATCCTTCCAAGG	NA	False	NA	0	True	AATAAA	-19	NA	45906552	45896124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.30	chr17	-	2171	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	676.839671435121	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906494	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903270_45904257_45904359_45906407
ES.15252.31	chr17	-	1776	11	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-186	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	790.860297397714	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45901223	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898590_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182
ES.15252.32	chr17	-	4228	12	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	1453	junction_5	300.679313533168	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.33	chr17	-	2614	10	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_3	983.858252863895	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906482	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.34	chr17	-	3118	13	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	1453	junction_5	324.240908379351	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906453	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45904359_45906407
ES.15252.35	chr17	-	1447	6	NNC	ENSMUSG00000023942.16	novel	2216	12	NA	NA	-152	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	909.712613961134	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45899819	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899459
ES.15252.36	chr17	-	4119	13	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1453	junction_5	288.303791839249	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906475	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.37	chr17	-	2039	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	2	44	junction_13	698.730844388172	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906834	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906803
ES.15252.38	chr17	-	1884	12	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	116	junction_11	690.794117227915	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906473	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45906407
ES.15252.40	chr17	-	3653	9	NIC	ENSMUSG00000023942.16	novel	2216	12	NA	NA	352	-1	intron_retention	FALSE	canonical	3	1453	junction_5	313.053085554192	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45902836	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848
ES.15252.41	chr17	-	2505	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-1	intron_retention	FALSE	canonical	2	2	junction_12	676.366580693702	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903643_45904257_45904359_45906407
ES.15252.42	chr17	-	2108	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	40	junction_13	662.162844877372	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906826	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906720
ES.15252.43	chr17	-	1942	13	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	889.972670460541	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899921_45900001_45900133_45900232_45900339_45900475_45900619_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.44	chr17	-	2873	10	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	154	junction_9	699.421206921379	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906501	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901265_45903104_45903188_45906407
ES.15252.45	chr17	-	3042	11	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	1762	junction_10	235.362720072657	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.46	chr17	-	2814	12	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	1762	junction_11	226.146116738056	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906472	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.47	chr17	-	2896	9	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	2	junction_2	1035.91466226712	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906453	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45897232_45898153_45898240_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.48	chr17	-	3412	11	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	1762	junction_10	237.174113258593	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.49	chr17	-	3339	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	671.859021208094	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906494	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45905157
ES.15252.5	chr17	-	4541	13	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	5	junction_5	668.572665999906	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45906479	45896125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899510_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.50	chr17	-	2792	12	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	1762	junction_11	225.787254506362	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906449	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.51	chr17	-	2284	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_6	861.804800864383	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906465	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899510_45899603_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.52	chr17	-	3320	12	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_4	704.192826710186	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45898691_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.53	chr17	-	2139	15	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	836.35882654199	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899510_45899603_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.54	chr17	-	2096	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-534	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	671.859021208094	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45907417	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45907323
ES.15252.55	chr17	-	1904	13	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	874.692148225115	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906452	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900433_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.56	chr17	-	2253	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-111	-1	combination_of_known_junctions	FALSE	canonical	3	109	junction_13	684.125062098821	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45910643	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ES.15252.57	chr17	-	2039	13	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	109	junction_12	874.46654770526	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45910512	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45904257_45904359_45910398
ES.15252.58	chr17	-	1973	2	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	5091	1	1257	-1	intron_retention	FALSE	canonical	3	2235	junction_1	0	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45898410	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45896709_45897019
ES.15252.59	chr17	-	2242	10	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	116	junction_9	755.858566690559	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906451	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45906407
ES.15252.6	chr17	-	3042	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_12	711.553721250091	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906468	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45904161_45904257_45904359_45906407
ES.15252.60	chr17	-	2195	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_13	645.50828557468	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45910592	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ES.15252.61	chr17	-	1930	13	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	881.566735830148	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906455	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900433_45900606_45900747_45900848_45901052_45901182_45901265_45904257_45904359_45906407
ES.15252.62	chr17	-	1950	13	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	898.57323250065	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906493	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900433_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.63	chr17	-	3245	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	706.193060751275	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906452	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45905214
ES.15252.64	chr17	-	3394	12	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_8	920.2945180756	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906453	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45901949_45902302_45903104_45903188_45904257_45904359_45906407
ES.15252.65	chr17	-	4884	11	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	2232	junction_3	148.156707576809	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45906494	45896127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.66	chr17	-	2010	13	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_11	693.927329688699	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906494	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45904257_45904359_45906407
ES.15252.67	chr17	-	3326	12	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	895.337500426192	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906468	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45898691_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901265_45903104_45903184_45904257_45904359_45906407
ES.15252.68	chr17	-	2973	12	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1762	junction_11	224.599367837618	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906454	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.69	chr17	-	3900	8	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	74	0	intron_retention	FALSE	canonical	3	2232	junction_3	124.546852097301	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45903692	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45900001_45900133_45900232_45900339_45900747_45900848_45901265_45903104
ES.15252.7	chr17	-	2068	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	675.493937183449	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906455	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897250_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.70	chr17	-	2018	13	FSM	ENSMUSG00000023942.16	ENSMUST00000171847.8	2033	13	12	3	12	0	multi-exon	FALSE	canonical	3	17	junction_12	693.627476668052	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45910517	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45910398
ES.15252.71	chr17	-	2201	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	879.928016152155	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45910511	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903270_45904257_45904359_45910398
ES.15252.72	chr17	-	2110	14	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	676.839671435121	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906455	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903250_45904257_45904359_45906407
ES.15252.73	chr17	-	2329	14	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	50	junction_12	665.039563711645	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906474	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903450_45904257_45904359_45906407
ES.15252.74	chr17	-	2301	14	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	865.442486953843	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906468	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45898691_45898800_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.76	chr17	-	5818	11	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	2232	junction_3	144.093893000363	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906491	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ES.15252.77	chr17	-	3216	9	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-881	0	intron_retention	FALSE	canonical	3	2232	junction_3	111.131608352439	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45901918	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848
ES.15252.78	chr17	-	2725	11	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	154	junction_10	685.543434072561	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906486	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.79	chr17	-	2071	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	44	junction_13	661.19485709831	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906874	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906803
ES.15252.8	chr17	-	2304	13	NIC	ENSMUSG00000023942.16	novel	2033	13	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	109	junction_12	668.599837762137	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45910568	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ES.15252.80	chr17	-	2011	13	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	21	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_3	925.448220983877	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45910508	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898236_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45910398
ES.15252.81	chr17	-	3186	13	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_4	677.470965962544	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906455	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45898691_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.82	chr17	-	4012	7	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	154	junction_6	877.917991614251	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906494	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45897232_45898153_45900001_45900133_45900232_45900339_45901052_45901182_45901265_45903104_45903188_45906407
ES.15252.83	chr17	-	2140	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-262	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_13	654.668894134085	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45907145	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45907005
ES.15252.84	chr17	-	1913	12	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	485	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	721.038151923271	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45902703	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45902606
ES.15252.85	chr17	-	2175	14	NIC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	711.775420003185	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906494	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903270_45904257_45904359_45906407
ES.15252.86	chr17	-	4939	11	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2235	junction_1	140.733080688231	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906434	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.87	chr17	-	2186	11	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	7	junction_4	734.54291229308	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906451	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899921_45900001_45900133_45900232_45900339_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.89	chr17	-	2106	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	880.918092895436	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45910513	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898502_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45910398
ES.15252.9	chr17	-	2222	13	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGCATCCTTCCAA	NA	False	NA	-2	True	AATAAA	-17	NA	45906495	45896126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
ES.15252.90	chr17	-	4367	13	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_3	920.933478717232	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906453	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898483_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903450_45904257
ES.15252.91	chr17	-	2118	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-238	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	885.783656651291	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45907121	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900852_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45907005
ES.15252.92	chr17	-	4097	11	NIC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_4	729.252775106136	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906421	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ES.15252.94	chr17	-	2423	15	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	858.909230551477	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906472	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45901949_45902302_45903104_45903188_45904257_45904359_45906407
ES.15252.95	chr17	-	2077	12	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_10	756.587718117742	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906455	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901235_45904253_45904359_45906407
ES.15252.96	chr17	-	2001	14	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	670.994501692656	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906455	45896128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901226_45903112_45903188_45904257_45904359_45906407
ES.15252.97	chr17	-	3413	13	NNC	ENSMUSG00000023942.16	novel	1988	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	11	junction_12	693.144420377168	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGTGCATCCTTC	NA	False	NA	-5	True	AATAAA	-14	NA	45906496	45896129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45905214
ES.15252.98	chr17	-	3465	10	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	154	junction_9	722.848992990007	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTCTGTGCATCCTT	NA	False	NA	-6	True	AATAAA	-13	NA	45906494	45896130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45896709_45897019_45897232_45898153_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ES.15253.1	chr17	+	180	1	Intergenic	novelGene_12726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTATTTTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	45915526	45915706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45915500_45915700
ES.15254.1	chr17	-	256	1	Intergenic	novelGene_12727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45919170	45918914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_45918900_45919200
ES.15255.1	chr17	+	178	1	Intergenic	novelGene_12728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45948208	45948386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_45948200_45948400
ES.15256.1	chr17	-	2140	17	NNC	ENSMUSG00000058626.17	novel	2591	22	NA	NA	16289	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.12775556631865	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGGGCTCTGCAAATG	NA	False	NA	NA	False	AATAAA	-39	NA	45953934	45941104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45941538_45941651_45941711_45942713_45942828_45942934_45943014_45943306_45943376_45943624_45943690_45943800_45943859_45943965_45944032_45944294_45944335_45944697_45944921_45949620_45949797_45949994_45950159_45950335_45950411_45950548_45950635_45950728_45950813_45953393_45953563_45953754
ES.15257.1	chr17	+	1998	3	Antisense	novelGene_ENSMUSG00000036026.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGTGTTAGAGACGTG	NA	False	NA	NA	False	AATGAA	-5	NA	45977298	45981622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_45978708_45979445_45979674_45981261
ES.15258.1	chr17	+	622	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	22	1	-13	-1	multi-exon	FALSE	canonical	3	814	junction_1	143	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	36	True	AATAAA	-25	NA	45997269	46009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45997354_46006407_46006499_46008973
ES.15258.2	chr17	+	813	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	25	-193	-10	193	multi-exon	FALSE	canonical	3	814	junction_1	143	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTGAAGATACTATGA	NA	False	NA	NA	False	AATAGA	-22	NA	45997272	46009614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_45997354_46006407_46006499_46008973
ES.15258.4	chr17	+	992	3	NNC	ENSMUSG00000023939.8	novel	510	2	NA	NA	263	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	548	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	36	True	AATAAA	-25	NA	45997545	46009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_45998000_46006407_46006499_46008973
ES.15258.5	chr17	+	2948	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	-2343	-95	-2343	0	multi-exon	FALSE	canonical	3	1100	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	46003998	46009421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46006499_46008973
ES.15258.6	chr17	+	636	3	NNC	ENSMUSG00000023939.8	novel	510	2	NA	NA	-115	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	542	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	False	NA	36	True	AATAAA	-25	NA	46006226	46009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46006325_46006407_46006499_46008973
ES.15259.10	chr17	-	4228	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-36	-5	intron_retention	FALSE	canonical	3	63	junction_19	31.4871747997617	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997099	45971101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.11	chr17	-	4324	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	29	-5	intron_retention	FALSE	canonical	3	105	junction_19	27.7938470508186	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997156	45971101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.13	chr17	-	4166	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	73	-6	intron_retention	FALSE	canonical	3	7	junction_21	46.335119624941	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45996973	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45996841
ES.15259.14	chr17	-	4864	21	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	63	junction_18	31.7812838003753	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997198	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.15	chr17	-	2964	21	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	47.7984309365904	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997179	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.16	chr17	-	2953	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	46.9482756825973	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997062	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.18	chr17	-	4171	23	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	20	-6	intron_retention	FALSE	canonical	1	1	junction_21	41.1513031636437	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997165	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45989928_45990162_45990210_45990457_45990641_45997042
ES.15259.19	chr17	-	4653	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-21	-6	intron_retention	FALSE	canonical	3	105	junction_18	27.6450616404915	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997084	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.2	chr17	-	3474	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	56.1402847249469	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGCAGTCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-24	NA	45997787	45971092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997264_45997432_45997586
ES.15259.21	chr17	-	3503	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.1431084271403	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997164	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989642_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.22	chr17	-	3368	24	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_23	42.6672180178617	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997074	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45996841
ES.15259.23	chr17	-	3319	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_22	45.6465037629951	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997064	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45996841
ES.15259.24	chr17	-	3282	24	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	11	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_23	55.9028660694835	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997174	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45991513_45991568_45997042
ES.15259.25	chr17	-	4010	4	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	21494	6	433	-6	intron_retention	FALSE	canonical	3	169	junction_2	9.62635271879577	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45975691	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682
ES.15259.26	chr17	-	4768	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	0	-6	intron_retention	FALSE	canonical	3	105	junction_18	27.8965533189107	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997063	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.28	chr17	-	4163	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	14	-6	intron_retention	FALSE	canonical	3	63	junction_19	31.2872000806862	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997171	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.29	chr17	-	3340	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.5819632833296	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	False	NA	-12	True	AATAAA	-14	NA	45997187	45971102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974656_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.3	chr17	-	3705	25	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	42.8551946481793	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGGCAGTCCCTCC	NA	False	NA	-5	True	AATAAA	-21	NA	45997814	45971095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042_45997432_45997640
ES.15259.30	chr17	-	5201	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-34	-7	intron_retention	FALSE	canonical	3	105	junction_18	28.0602687942802	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGCTTCTGGTTGGCA	NA	False	NA	-13	True	AATAAA	-13	NA	45997097	45971103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45973895_45974432_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.31	chr17	-	3230	25	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-21	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_24	53.1691319961331	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGCTTCTGGTTGGCA	NA	False	NA	-13	True	AATAAA	-13	NA	45997084	45971103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45991513_45991568_45997042
ES.15259.33	chr17	-	3352	23	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	46.7316278479823	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45997844	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997586
ES.15259.34	chr17	-	3214	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	41.8104463208669	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45997156	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990210_45990457_45990641_45997042
ES.15259.35	chr17	-	2966	22	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	41	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	44.5494960282592	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45997144	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.36	chr17	-	1303	4	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	2032	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	85.605036196606	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45974092	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45973788
ES.15259.37	chr17	-	6388	9	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-2769	-8	intron_retention	FALSE	canonical	3	153	junction_8	22.3648720094706	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45980149	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620
ES.15259.38	chr17	-	6446	19	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	7130	8	1494	-8	intron_retention	FALSE	canonical	3	141	junction_14	19.4479361944198	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGCTTCTGGTTGGC	NA	False	NA	-14	True	AATAAA	-12	NA	45990055	45971104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311
ES.15259.39	chr17	-	3218	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.7768443163583	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTTGCTTCTGGTTGG	NA	False	NA	-15	True	AATAAA	-11	NA	45997159	45971105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978714_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.40	chr17	-	4218	21	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	26	-27	intron_retention	FALSE	canonical	3	63	junction_18	31.9350512759883	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACAAAAGCTGT	NA	False	NA	9	True	NA	NA	NA	45997159	45971123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.42	chr17	-	1959	4	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	26	1540	intron_retention	FALSE	canonical	3	111	junction_1	44.1008944227766	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTCTCCTTTTCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	45997159	45988348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.43	chr17	-	177	2	Antisense	novelGene_ENSMUSG00000023939.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46005616	45988417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_45988576_46005597
ES.15259.5	chr17	-	4184	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	38	0	intron_retention	FALSE	canonical	3	105	junction_19	27.5687345369159	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTGGCAGTCCCTC	NA	False	NA	-6	True	AATAAA	-20	NA	45997147	45971096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.6	chr17	-	3299	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-55	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGGTTGGCAGTCCCT	NA	False	NA	-7	True	AATAAA	-19	NA	45997240	45971097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
ES.15259.7	chr17	-	4433	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-40	-4	intron_retention	FALSE	canonical	1	1	junction_22	53.6065595159818	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCTGGTTGGCAGTC	NA	False	NA	-10	True	AATAAA	-16	NA	45997103	45971100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45990243_45990457_45990641_45991513_45991568_45997042
ES.15259.8	chr17	-	3013	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	-19	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	43.8411859645341	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997082	45971101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ES.15259.9	chr17	-	3316	24	NNC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	52.5683280267804	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTCTGGTTGGCAGT	NA	False	NA	-11	True	AATAAA	-15	NA	45997159	45971101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989293_45989396_45990162_45990243_45990457_45990641_45997042
ES.1526.1	chr1	+	188	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	143555806	143555994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_143555800_143556000
ES.1526.2	chr1	+	187	2	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAGAATCAGAGG	NA	False	NA	NA	False	NA	NA	NA	143555807	143611369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_143555975_143611349
ES.15260.1	chr17	-	3923	1	Antisense	novelGene_ENSMUSG00000023939.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAAACCAGCGATGGTG	8979	False	NA	NA	False	NA	NA	NA	46009697	46005774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_46005800_46009700
ES.15261.1	chr17	-	1226	2	Intergenic	novelGene_12729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGGCTAAAAGCATGTC	NA	False	NA	NA	False	AATAAA	-33	NA	46037368	46034708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46035836_46037269
ES.15261.2	chr17	-	2575	2	Intergenic	novelGene_12730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGCTCAGTGGCTAA	NA	False	NA	NA	False	AATAAA	-24	NA	46037701	46034717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46035836_46036244
ES.15262.1	chr17	-	220	1	Intergenic	novelGene_12731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATAAGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	46038677	46038457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46038500_46038700
ES.15263.1	chr17	+	159	1	Intergenic	novelGene_12732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	46054928	46055087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46054900_46055100
ES.15264.1	chr17	+	176	1	Intergenic	novelGene_12733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAAGGTGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	46074726	46074902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46074700_46074900
ES.15264.2	chr17	+	284	1	Intergenic	novelGene_12734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	46074726	46075010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46074700_46075000
ES.15265.1	chr17	+	1617	4	NIC	ENSMUSG00000097727.9	novel	735	5	NA	NA	37	-1339	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	46078157	46098181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46078234_46087083_46087345_46090184_46090318_46097034
ES.15265.2	chr17	+	221	2	Intergenic	novelGene_12735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAATTGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	46092806	46093223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46092985_46093180
ES.15265.3	chr17	+	230	1	Intergenic	novelGene_12736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAAATTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	46092992	46093222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46093000_46093200
ES.15265.4	chr17	+	2486	1	Genic_Genomic	ENSMUSG00000097727.9	novel	NA	NA	NA	NA	18916	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTGTTCCAGAGGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	46097036	46099522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_46097000_46099500
ES.15266.1	chr17	+	5116	3	Antisense	novelGene_ENSMUSG00000117139.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGGCTTGGGATCTAC	8889	False	NA	NA	False	NA	NA	NA	46133189	46141178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46133538_46136005_46136084_46136488
ES.15266.2	chr17	+	3132	1	Intergenic	novelGene_12737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATGATTAATATGTATG	NA	False	NA	NA	False	NA	NA	NA	46139552	46142684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46139600_46142700
ES.15267.1	chr17	-	327	1	Intergenic	novelGene_12738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTTTTGAAAAATT	8686	False	NA	NA	False	NA	NA	NA	46144844	46144517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46144500_46144800
ES.15268.1	chr17	+	3601	2	Intergenic	novelGene_12739	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGATGTGTGACTATTT	1320	False	NA	NA	False	AATATA	-11	NA	46162478	46166899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46162586_46163405
ES.15269.1	chr17	-	2104	1	Intergenic	novelGene_12740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAGAAACGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	46290411	46288307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46288300_46290400
ES.1527.1	chr1	-	2552	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	70	6809	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.6696802704846	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGAATCTACCCAAATA	NA	False	NA	NA	False	NA	NA	NA	143578561	143467728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143467738_143483510_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.12	chr1	-	6264	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	23	5299	23	2062	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTCAGACTTCTGAAT	NA	False	NA	1	True	AGTAAA	-17	NA	143578608	143479836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.13	chr1	-	4411	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	82	2060	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.6696802704846	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGGTCAGACTTCTGA	NA	False	NA	-1	True	AGTAAA	-15	NA	143578549	143479838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143481395_143483186_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.14	chr1	-	6092	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	70	5424	70	1937	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTTTTGTGCCAAAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	143578561	143479961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.15	chr1	-	5666	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	83	5837	83	1524	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAACTGTGTTCATTAC	NA	False	NA	NA	False	AATGAA	-28	NA	143578548	143480374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.16	chr1	-	5178	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	55	6353	55	1008	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGAGAGTGCTCTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	143578576	143480890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.18	chr1	-	10947	16	NIC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	71	1002	intron_retention	FALSE	canonical	3	314	junction_9	27.2636510149809	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGATGAGAGTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	143578560	143480896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_143484296_143485107_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.19	chr1	-	4539	13	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	16254	1000	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	129.450977422172	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAAAGTGATGAGAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	143561684	143480898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143550897_143550969_143553376_143553594_143561660
ES.1527.2	chr1	-	7032	1	Genic_Genomic	ENSMUSG00000026361.10	novel	NA	NA	NA	NA	30748	2	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGCAGAGGGCTCAT	NA	False	NA	-1	True	NA	NA	NA	143481567	143474535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_143474500_143481600
ES.1527.20	chr1	-	4983	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	55	1000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	114.759474659923	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAAAGTGATGAGAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	143578307	143480898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143550886_143550969_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.21	chr1	-	4673	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	81	6832	81	529	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTATGTATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	143578550	143481369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.22	chr1	-	4093	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	56	7437	56	-76	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTGAGCCCTTAAGTA	NA	False	NA	NA	False	CATAAA	-20	NA	143578575	143481974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.23	chr1	-	3761	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	79	7746	79	-385	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTCTTTGTGTGCACT	NA	False	NA	NA	False	AGTAAA	-32	NA	143578552	143482283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.24	chr1	-	3569	17	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	82	-647	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.6551174195731	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAATATTTTAATGTAA	NA	False	NA	NA	False	AATAAA	-34	NA	143578549	143482545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491215_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.25	chr1	-	3476	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	82	8028	82	-667	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAGTCAACAACTCAAA	NA	False	NA	NA	False	AATAAA	-14	NA	143578549	143482565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.26	chr1	-	3016	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	74	8496	74	-1135	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTATGTTGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	143578557	143483033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.27	chr1	-	2883	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	53	8650	53	-1289	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGATATTTTACTATTC	NA	False	NA	50	True	TATAAA	-24	NA	143578578	143483187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.28	chr1	-	2976	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	43	-1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	115.073408193885	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTGTTCAATGTG	NA	False	NA	0	True	GATAAA	-16	NA	143578588	143483237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143551820_143551954_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.29	chr1	-	2876	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	81	-1341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.138670718441	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTGTGTTCAATG	NA	False	NA	-2	True	GATAAA	-14	NA	143578550	143483239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143513203_143513277_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.3	chr1	-	11343	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	80	163	80	-163	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCATCTTATTGTCC	NA	False	NA	NA	False	NA	NA	NA	143578551	143474700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.30	chr1	-	2740	16	NIC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	82	-1345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	91.1634429655513	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATGTGTGTGTGTTC	NA	False	NA	-6	True	GATAAA	-10	NA	143578549	143483243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.31	chr1	-	2696	16	NIC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	82	-1346	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.7934419778094	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATGTGTGTGTGTT	NA	False	NA	-7	True	GATAAA	-9	NA	143578549	143483244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_143484296_143485107_143485250_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.33	chr1	-	2745	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	82	8759	82	-1398	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACATTTGCTTACG	NA	False	NA	-59	True	GATAAA	-13	NA	143578549	143483296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.34	chr1	-	4084	11	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	21838	-1594	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	139.185092592562	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGGAAGCTACAGTATG	NA	False	NA	NA	False	ATTAAA	-25	NA	143556100	143483492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143555802_143556016
ES.1527.35	chr1	-	2821	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	-199	8964	-199	-1603	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTTTACTTGGGAAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	143578830	143483501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.37	chr1	-	4837	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	82	-1612	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	115.23077491664	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTAGTGATTTTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	143578549	143483510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143550886_143552514_143552697_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.38	chr1	-	2584	18	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	77	-1635	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	114.285958353669	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAGATTAAAGTG	NA	False	NA	NA	False	AAGAAA	-5	NA	143578554	143483533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143550897_143550969_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.39	chr1	-	2426	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	81	9079	81	-1718	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTTTGTTGACTTTGA	NA	False	NA	NA	False	AATACA	-15	NA	143578550	143483616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.4	chr1	-	6296	3	ISM	ENSMUSG00000026361.10	ENSMUST00000162638.2	3134	8	25180	-3658	21176	3658	3prime_fragment	FALSE	canonical	3	345	junction_2	24	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTTGATGTTGGGC	NA	False	NA	NA	False	AATAAA	-26	NA	143491139	143478240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_143484296_143485107_143485250_143491040
ES.1527.40	chr1	-	2133	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	69	9384	69	-2023	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTAGGAGTTATTA	NA	False	NA	NA	False	AATAAA	-18	NA	143578562	143483921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.41	chr1	-	3513	15	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	81	-7307	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	90.3515808564815	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTTATTCCTAGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	143578550	143489205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143491215_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.42	chr1	-	2205	13	NIC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	-162	-8510	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	131.430880651728	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCATTGTTGTCAGACA	NA	False	NA	NA	False	NA	NA	NA	143578793	143490408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143543362_143543428_143545727_143545807_143547067_143547167_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.43	chr1	-	1884	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGCGAAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	143501644	143499760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_143499800_143501600
ES.1527.44	chr1	-	7350	10	ISM	ENSMUSG00000026361.10	ENSMUST00000212510.2	1047	11	-186	5041	83	-5041	5prime_fragment	FALSE	canonical	3	314	junction_3	25.5840420941755	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAACAACAACAAAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	143578548	143537170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.5	chr1	-	7253	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	-130	4463	-130	2898	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTCTTAGATCCATG	NA	False	NA	NA	False	AATAAA	-24	NA	143578761	143479000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.6	chr1	-	6967	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	-197	4816	-197	2545	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTAAATCCTTTTTTCA	NA	False	NA	-6	True	AATAAA	-23	NA	143578828	143479353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.1527.7	chr1	-	5564	8	NNC	ENSMUSG00000026361.10	novel	3134	8	NA	NA	-927	2541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	125.159000915652	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGAGTTAAATCCTTTT	NA	False	NA	-10	True	AATAAA	-19	NA	143513242	143479357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143513203
ES.1527.8	chr1	-	6756	17	NNC	ENSMUSG00000026361.10	novel	11586	17	NA	NA	81	2539	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.6551174195731	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATGAGTTAAATCCTT	NA	False	NA	-12	True	AATAAA	-17	NA	143578550	143479359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143484296_143485107_143485250_143491040_143491215_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ES.15270.1	chr17	-	283	1	Intergenic	novelGene_12741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	46291392	46291109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46291100_46291400
ES.15271.1	chr17	-	3500	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-47	-2	-47	2	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGGTCTCTCCTTCT	NA	False	NA	1	True	ATTAAA	-24	NA	46343342	46327916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.10	chr17	-	3919	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.824017239853	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343299	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46330270_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.11	chr17	-	3328	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-563	0	-9	0	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343304	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.13	chr17	-	3515	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	208.373193465719	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343301	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336278_46336470_46339284_46339326_46342216
ES.15271.14	chr17	-	2891	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	357	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341925	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.15	chr17	-	4254	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	339	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	189.13788327273	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341943	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.17	chr17	-	2860	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	1802	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	217.106199913352	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46340480	46327921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.18	chr17	-	4671	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	362	-3	intron_retention	FALSE	canonical	3	45	junction_6	206.171449688522	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46341920	46327921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.2	chr17	-	3531	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-8	-1550	-8	0	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343303	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.20	chr17	-	4198	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	270	-3	intron_retention	FALSE	canonical	3	13	junction_6	214.745327203075	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46342012	46327921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341971
ES.15271.22	chr17	-	2804	9	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	400	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.100776042643	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46341882	46327921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46328764_46328876_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.23	chr17	-	4675	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	123	junction_2	145.889988994752	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTCCCTGGTCTCTC	NA	False	NA	-4	True	ATTAAA	-19	NA	46343296	46327921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.24	chr17	-	3795	6	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	219.191605678685	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTCTCCCTGGTCTC	NA	False	NA	-6	True	ATTAAA	-17	NA	46342757	46327923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46334016_46336091_46336470_46339276_46339326_46342216
ES.15271.25	chr17	-	6661	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	442	junction_4	49.1044804473075	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	False	NA	-9	True	ATTAAA	-14	NA	46342745	46327926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.26	chr17	-	5018	7	ISM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	1388	-1542	375	-8	3prime_fragment	FALSE	canonical	3	122	junction_2	186.819877600502	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	False	NA	-9	True	ATTAAA	-14	NA	46341907	46327926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276
ES.15271.27	chr17	-	3387	7	FSM	ENSMUSG00000023951.19	ENSMUST00000113519.2	513	7	-1017	-1857	-4	-8	multi-exon	FALSE	canonical	0	0	junction_1	216.58023917246	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	False	NA	-9	True	ATTAAA	-14	NA	46343299	46327926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.28	chr17	-	5500	6	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	123	junction_2	155.338340405709	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	False	NA	-9	True	ATTAAA	-14	NA	46343300	46327926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.3	chr17	-	3016	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	304	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	209.534664220993	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341978	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.31	chr17	-	3237	6	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	225	-47	intron_retention	FALSE	canonical	3	13	junction_5	197.787158329352	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCATTTTGT	NA	False	NA	-48	True	AATACA	-10	NA	46342057	46327965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46341971
ES.15271.32	chr17	-	3327	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-8	132	-8	-132	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTTGTCTCTAGAGCAG	NA	False	NA	75	True	AAAAAG	-13	NA	46343303	46328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.33	chr17	-	6192	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-207	intron_retention	FALSE	canonical	3	442	junction_5	44.4747119158742	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGTTATCATTTATT	NA	False	NA	0	True	AATAGA	-39	NA	46343301	46328125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.35	chr17	-	4147	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	-208	intron_retention	FALSE	canonical	3	122	junction_2	180.347273028701	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGTTATCATTTAT	NA	False	NA	-1	True	AATAGA	-38	NA	46343301	46328126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.36	chr17	-	3301	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-6	-1322	-6	-228	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.37	chr17	-	9108	4	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-228	intron_retention	FALSE	canonical	3	442	junction_3	52.6687763290548	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.38	chr17	-	8140	4	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	252	-228	intron_retention	FALSE	canonical	3	464	junction_1	43.7340447096615	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46342030	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46335447_46336272_46336470_46339276
ES.15271.39	chr17	-	4055	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-228	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.4	chr17	-	4288	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343306	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.40	chr17	-	5017	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	-228	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.41	chr17	-	5498	6	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-215	-228	intron_retention	FALSE	canonical	3	122	junction_2	155.722060094259	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46342956	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.42	chr17	-	3923	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-228	intron_retention	FALSE	canonical	3	41	junction_1	206.452627738181	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.43	chr17	-	3097	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-560	228	-6	-228	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTTTTAATTT	NA	False	NA	-21	True	AATAGA	-18	NA	46343301	46328146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.44	chr17	-	2715	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	302	-231	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCTCCTTTTTTAA	NA	False	NA	-24	True	AATAGA	-15	NA	46341980	46328149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.46	chr17	-	4003	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	359	-231	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	189.13788327273	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCTCCTTTTTTAA	NA	False	NA	-24	True	AATAGA	-15	NA	46341923	46328149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.48	chr17	-	3222	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-4	233	-4	-233	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATCTCTCTCCTTTTTT	NA	False	NA	-26	True	AATAGA	-13	NA	46343299	46328151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.49	chr17	-	2667	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	419	-234	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	209.534664220993	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAATCTCTCTCCTTTTT	NA	False	NA	-27	True	AATAGA	-12	NA	46341863	46328152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.5	chr17	-	4948	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	60	0	intron_retention	FALSE	canonical	3	338	junction_1	79.2600782235294	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46342681	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.50	chr17	-	8266	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	2	-236	intron_retention	FALSE	canonical	3	442	junction_4	45.7130998730123	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAAATCTCTCTCCTTT	NA	False	NA	-29	True	AATAGA	-10	NA	46343293	46328154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.51	chr17	-	3008	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	40	-268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	178.318907166518	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAGAAAAAT	NA	False	NA	-61	True	GATAAA	-31	NA	46343255	46328186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216_46342387_46342521
ES.15271.52	chr17	-	3318	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-512	645	-512	-645	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGTTAATATTTAATT	NA	False	NA	1	True	ATTAAA	-39	NA	46343807	46328563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.53	chr17	-	3505	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	-646	intron_retention	FALSE	canonical	3	41	junction_1	206.452627738181	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGGTTAATATTTAAT	NA	False	NA	0	True	ATTAAA	-38	NA	46343301	46328564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.54	chr17	-	4597	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-4	-646	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGGTTAATATTTAAT	NA	False	NA	0	True	ATTAAA	-38	NA	46343299	46328564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.55	chr17	-	2373	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	300	-647	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	209.534664220993	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGGTTAATATTTAA	NA	False	NA	-1	True	ATTAAA	-37	NA	46341982	46328565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.56	chr17	-	2860	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	-5	-882	-5	-668	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTAGGGTTTTTTTCA	NA	False	NA	-22	True	ATTAAA	-16	NA	46343300	46328586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.57	chr17	-	3591	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	334	-668	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	189.13788327273	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTAGGGTTTTTTTCA	NA	False	NA	-22	True	ATTAAA	-16	NA	46341948	46328586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.58	chr17	-	2074	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	506	-668	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTAGGGTTTTTTTCA	NA	False	NA	-22	True	ATTAAA	-16	NA	46341776	46328586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.59	chr17	-	2651	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-558	672	-4	-672	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGAGTAGGGTTTTT	NA	False	NA	-26	True	ATTAAA	-12	NA	46343299	46328590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.6	chr17	-	6397	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	442	junction_5	44.4747119158742	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343299	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.60	chr17	-	2085	6	NNC	ENSMUSG00000023951.19	novel	2765	6	NA	NA	359	-672	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	239.506158584701	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGAGTAGGGTTTTT	NA	False	NA	-26	True	ATTAAA	-12	NA	46341923	46328590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.61	chr17	-	4600	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	1109	-672	intron_retention	FALSE	canonical	2	8	junction_6	216.113717493566	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGAGTAGGGTTTTT	NA	False	NA	-26	True	ATTAAA	-12	NA	46341173	46328590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.62	chr17	-	1806	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	276	-673	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	216.053186951354	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAAGAGTAGGGTTTT	NA	False	NA	-27	True	ATTAAA	-11	NA	46342006	46328591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341971
ES.15271.63	chr17	-	3126	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-4	-673	intron_retention	FALSE	canonical	3	122	junction_2	180.347273028701	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAAGAGTAGGGTTTT	NA	False	NA	-27	True	ATTAAA	-11	NA	46342745	46328591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.64	chr17	-	1520	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	275	33	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTAATGTTATTGG	NA	False	NA	NA	False	TTTAAA	-3	NA	46342007	46329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.65	chr17	-	2830	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	33	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTAATGTTATTGG	NA	False	NA	NA	False	TTTAAA	-3	NA	46343301	46329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.66	chr17	-	3792	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	33	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTAATGTTATTGG	NA	False	NA	NA	False	TTTAAA	-3	NA	46343301	46329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.67	chr17	-	1881	6	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	740	33	intron_retention	FALSE	canonical	3	45	junction_5	186.035050460928	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTAATGTTATTGG	NA	False	NA	NA	False	TTTAAA	-3	NA	46341542	46329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46341406
ES.15271.68	chr17	-	2844	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	368	33	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	217.106199913352	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTAATGTTATTGG	NA	False	NA	NA	False	TTTAAA	-3	NA	46341914	46329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
ES.15271.69	chr17	-	4947	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-8	32	intron_retention	FALSE	canonical	3	442	junction_5	44.4747119158742	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGCTAATGTTATTG	NA	False	NA	NA	False	TTTAAA	-2	NA	46343303	46329372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.7	chr17	-	5247	7	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343303	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.70	chr17	-	1310	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	-3	1458	-3	28	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAACTCTGCTAATGTT	NA	False	NA	NA	False	NA	NA	NA	46342744	46329376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.71	chr17	-	1848	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	2161	4	intron_retention	FALSE	canonical	2	8	junction_6	220.087419500121	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATATATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	46340121	46329400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46340061
ES.15271.72	chr17	-	1975	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	-6	1482	-6	4	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATATATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	46343301	46329400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.73	chr17	-	1920	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	192.485843635318	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343296	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46342216
ES.15271.74	chr17	-	2270	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	211.536844863239	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343301	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335671_46336272_46336470_46339276_46339326_46342216
ES.15271.75	chr17	-	2870	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-4	3	intron_retention	FALSE	canonical	3	122	junction_2	180.347273028701	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343299	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.76	chr17	-	1913	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	750	3	intron_retention	FALSE	canonical	3	45	junction_6	212.230220908019	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46341532	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46341406
ES.15271.77	chr17	-	1791	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	244.696112555962	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343299	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46342216
ES.15271.78	chr17	-	2666	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-4	3	intron_retention	FALSE	canonical	3	41	junction_1	206.452627738181	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343299	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.79	chr17	-	2040	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	0	-67	0	3	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343295	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.8	chr17	-	4355	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	122	junction_2	180.347273028701	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343301	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
ES.15271.80	chr17	-	2757	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-12	3	intron_retention	FALSE	canonical	0	0	junction_4	198.433080659451	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343307	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46342216
ES.15271.81	chr17	-	1963	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-5	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	187.461107077353	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343300	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335379_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.82	chr17	-	2438	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.824017239853	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATATATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	46343301	46329401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46330270_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.83	chr17	-	2215	9	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.109520661288	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATATATATATATTCT	NA	False	NA	NA	False	NA	NA	NA	46343299	46329403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46332394_46332568_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ES.15271.84	chr17	-	2779	7	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	770	-1	intron_retention	FALSE	canonical	3	45	junction_6	206.171449688522	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAATATATATATATT	NA	False	NA	NA	False	NA	NA	NA	46341512	46329405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
ES.15271.9	chr17	-	3798	6	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	276	0	intron_retention	FALSE	canonical	3	45	junction_5	186.035050460928	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46342006	46327918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46341406
ES.15272.1	chr17	+	176	1	Intergenic	novelGene_12742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5697	False	NA	NA	False	NA	NA	NA	46416588	46416764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46416600_46416800
ES.15273.1	chr17	+	271	1	Intergenic	novelGene_12743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAGAAAAGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	46421359	46421630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46421400_46421600
ES.15274.1	chr17	+	879	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	6	-1	-3	1	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCAGTGCTTAGAAA	NA	False	NA	20	True	AATAAA	-20	NA	46421917	46439837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ES.15274.10	chr17	+	172	1	Intergenic	novelGene_12744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGAAAATTTGT	NA	False	NA	NA	False	NA	NA	NA	46466177	46466349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46466200_46466300
ES.15274.11	chr17	+	2863	12	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	-6	-1	intron_retention	TRUE	canonical	1	2	junction_3	18.6791084077664	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46471951	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474408_46474436_46475119_46475199_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.12	chr17	+	3432	11	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	5	6587	intron_retention	FALSE	non_canonical	0	0	junction_10	19.9158228552074	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46471962	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.13	chr17	+	5705	9	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	41	junction_5	11.0559655842446	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46471973	46480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.14	chr17	+	3142	14	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_2	26.7260925626744	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472018	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474222_46474335_46474408_46474436_46474677_46474806_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.15	chr17	+	3140	11	ISM	ENSMUSG00000023952.14	ENSMUST00000172170.8	2587	13	44	-31	-1	-1	intron_retention	FALSE	canonical	3	39	junction_1	11.6464586892325	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472035	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.16	chr17	+	3011	12	NNC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-1	6587	intron_retention	FALSE	non_canonical	0	0	junction_11	23.6660652544545	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472035	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472218_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.17	chr17	+	2896	13	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	1	6587	intron_retention	FALSE	non_canonical	0	0	junction_12	18.364367672207	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472037	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.18	chr17	+	3996	9	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_3	26.8840101175401	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTCTGCTTATTCTTA	NA	False	NA	0	True	AATAAA	-13	NA	46472037	46480291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474408_46474436_46474677_46474806_46475119_46475305_46475650_46475760_46475911_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.19	chr17	+	2882	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	81	3	2	-1	multi-exon	FALSE	canonical	3	39	junction_1	11.1762735698931	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472038	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.2	chr17	+	3669	5	FSM	ENSMUSG00000023967.10	ENSMUST00000123646.2	621	5	-3	-3045	-2	0	multi-exon	FALSE	canonical	3	1063	junction_2	42.9905512874632	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421918	46439836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568
ES.15274.20	chr17	+	5857	9	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	2	6587	intron_retention	FALSE	non_canonical	0	0	junction_8	21.7539507906035	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472038	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46474436_46475119_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480287_46486864
ES.15274.21	chr17	+	3455	13	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_2	21.8674987138447	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTCTGCTTATTCTTA	NA	False	NA	0	True	AATAAA	-13	NA	46472038	46480291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46472642_46473218_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.22	chr17	+	3228	11	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	39	junction_1	11.4175303809537	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472038	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.23	chr17	+	3561	14	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	4	6587	intron_retention	FALSE	non_canonical	0	0	junction_2	24.4252270404255	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472040	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46472642_46473311_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.24	chr17	+	3031	11	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_3	19.5908141739949	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTATTCTTAAGACA	NA	False	NA	5	True	AATAAA	-18	NA	46472041	46480296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46474408_46474436_46475119_46475199_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.25	chr17	+	4090	13	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_2	21.8674987138447	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472044	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46472642_46473857_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.26	chr17	+	3002	10	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	9	0	intron_retention	FALSE	canonical	2	6	junction_5	19.3397179751418	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGCTTATTCTTAAGA	NA	False	NA	3	True	AATAAA	-16	NA	46472045	46480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.27	chr17	+	5131	10	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	10	-4	intron_retention	FALSE	canonical	2	6	junction_1	19.2051947705	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACTCTGCTTATTCTT	NA	False	NA	-1	True	AATAAA	-12	NA	46472046	46480290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46472642_46474436_46475119_46475760_46475911_46476110_46476380_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.28	chr17	+	2837	12	FSM	ENSMUSG00000023952.14	ENSMUST00000169383.8	2929	12	89	3	10	-3	multi-exon	FALSE	canonical	1	1	junction_1	18.651656696408	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTCTGCTTATTCTTA	NA	False	NA	0	True	AATAAA	-13	NA	46472046	46480291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46472218_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.29	chr17	+	5446	10	NNC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	10	6587	intron_retention	FALSE	non_canonical	0	0	junction_9	20.8806130178211	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472046	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46480288_46486864
ES.15274.3	chr17	+	6125	4	NIC	ENSMUSG00000023967.10	novel	621	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1063	junction_2	17.3781471969828	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	17	True	AATAAA	-17	NA	46421918	46439834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46422056_46428865_46428898_46433649_46436340_46436568
ES.15274.30	chr17	+	3355	10	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	11	-1	intron_retention	FALSE	canonical	2	9	junction_8	18.6010752377383	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472047	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478267_46478321_46478651
ES.15274.31	chr17	+	3430	10	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	20	-1	intron_retention	FALSE	canonical	1	1	junction_1	20.5558558536623	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472056	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472218_46474408_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.32	chr17	+	3913	8	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	21	0	intron_retention	FALSE	canonical	3	39	junction_1	9.52333332142798	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTATTCTTAAGACA	NA	False	NA	5	True	AATAAA	-18	NA	46472057	46480296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478148
ES.15274.33	chr17	+	3850	8	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	21	-1	intron_retention	FALSE	canonical	3	39	junction_1	12.5063249304225	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472057	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.34	chr17	+	3541	9	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	24	-1	intron_retention	FALSE	canonical	1	1	junction_1	21.5522620622523	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472060	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472218_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.35	chr17	+	3262	10	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	25	-1	intron_retention	FALSE	canonical	3	39	junction_1	12.1289369324402	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472061	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.36	chr17	+	5879	7	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	-22	-2	intron_retention	FALSE	canonical	2	9	junction_5	21.9671471874605	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46472064	46480292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46474436_46475119_46475305_46475650_46475760_46475911_46477373_46477517_46477577_46478267_46478321_46478651
ES.15274.37	chr17	+	2632	11	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	6	junction_6	18.422811946063	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472068	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.38	chr17	+	3148	15	NNC	ENSMUSG00000023952.14	novel	2587	13	NA	NA	-9	6587	intron_retention	FALSE	non_canonical	0	0	junction_3	26.2119500711147	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46472077	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46472253_46473959_46474140_46474222_46474335_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.39	chr17	+	3060	11	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	1	-1	intron_retention	FALSE	canonical	2	9	junction_8	17.6468127433823	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472087	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46472253_46474408_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478267_46478321_46478651_46478817_46479071
ES.15274.4	chr17	+	1197	1	NIC	ENSMUSG00000023967.10	novel	884	6	NA	NA	-1	-10937	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGCAGATAGATAAACT	NA	False	NA	NA	False	NA	NA	NA	46421919	46423116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46421900_46423100
ES.15274.40	chr17	+	6595	5	NIC	ENSMUSG00000023952.14	novel	2966	12	NA	NA	59	-1	intron_retention	FALSE	canonical	3	48	junction_2	7.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46472145	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46474436_46475119_46475760_46475911_46477373_46477517_46477577_46478148
ES.15274.41	chr17	+	4861	7	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-800	-1	intron_retention	FALSE	canonical	2	9	junction_5	21.8250620464945	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46473158	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46474436_46475119_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478267_46478321_46478651
ES.15274.42	chr17	+	2811	13	NNC	ENSMUSG00000023952.14	novel	826	5	NA	NA	51	6587	intron_retention	FALSE	non_canonical	0	0	junction_12	21.8674987138447	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46474009	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46474140_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071_46480288_46486864
ES.15274.43	chr17	+	3308	10	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	41	junction_5	10.678234468208	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46474114	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46474436_46475119_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.44	chr17	+	3272	7	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	932	-2	intron_retention	FALSE	canonical	2	9	junction_4	21.5361453272297	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46475175	46480292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46475760_46475911_46476110_46476380_46477373_46477517_46477577_46478267_46478321_46478651_46478817_46479071
ES.15274.45	chr17	+	4059	5	NNC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	967	6587	intron_retention	FALSE	non_canonical	0	0	junction_4	22.5541016225431	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46475210	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46475760_46475911_46476924_46477236_46477577_46478148_46480288_46486864
ES.15274.46	chr17	+	3852	5	NIC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	993	-6	intron_retention	FALSE	canonical	3	48	junction_1	10.7819293264239	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGACACTCTGCTTATTC	NA	False	NA	-3	True	AATAAA	-10	NA	46475236	46480288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46475760_46475911_46477373_46477517_46477577_46478148_46478321_46478651
ES.15274.47	chr17	+	3278	7	NNC	ENSMUSG00000023952.14	novel	2929	12	NA	NA	-1106	6587	intron_retention	FALSE	non_canonical	0	0	junction_6	25.0693482608189	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46475515	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46475760_46475911_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46480288_46486864
ES.15274.48	chr17	+	2349	8	ISM	ENSMUSG00000023952.14	ENSMUST00000172170.8	2587	13	3917	-30	-713	-2	intron_retention	FALSE	canonical	3	41	junction_3	11.5316777546346	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCTGCTTATTCTTAA	NA	False	NA	1	True	AATAAA	-14	NA	46475908	46480292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.49	chr17	+	2016	5	ISM	ENSMUSG00000023952.14	ENSMUST00000172170.8	2587	13	4983	-31	271	-1	intron_retention	FALSE	canonical	3	50	junction_4	10.0747208398049	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGCTTATTCTTAAG	NA	False	NA	2	True	AATAAA	-15	NA	46476974	46480293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ES.15274.5	chr17	+	3556	4	NIC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	1040	junction_3	15.6276108929747	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGTGTGGTCAGTGCT	NA	False	NA	14	True	AATAAA	-14	NA	46421921	46439831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46422056_46428865_46428898_46433649_46436639_46439430
ES.15274.50	chr17	+	2412	2	NNC	ENSMUSG00000023952.14	novel	833	2	NA	NA	-19	6587	intron_retention	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGGATAGATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	46477894	46486883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46480288_46486864
ES.15274.51	chr17	+	1734	1	Antisense	novelGene_ENSMUSG00000023953.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTTGTATTTATGTAG	NA	False	NA	NA	False	NA	NA	NA	46480911	46482645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46480900_46482600
ES.15274.52	chr17	+	175	1	Intergenic	novelGene_12745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46485870	46486045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46485900_46486000
ES.15274.6	chr17	+	1072	3	NNC	ENSMUSG00000023967.10	novel	571	3	NA	NA	8	46896	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	46421929	46486732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46422132_46422214_46423071_46486718
ES.15274.9	chr17	+	3301	5	NIC	ENSMUSG00000023967.10	novel	884	6	NA	NA	29	-2	intron_retention	FALSE	canonical	3	1040	junction_4	23.6061432682258	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGGTCAGTGCTTAG	NA	False	NA	17	True	AATAAA	-17	NA	46421950	46439834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46422056_46428865_46428898_46433649_46436340_46436568_46436639_46439430
ES.15275.1	chr17	-	967	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	-1	0	-1	0	multi-exon	FALSE	canonical	1	1	junction_4	1.22474487139159	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	False	NA	NA	False	CATAAA	-21	NA	46455143	46440196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
ES.15276.1	chr17	-	1257	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	13	2	13	-2	multi-exon	FALSE	canonical	3	95	junction_1	3.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTTGATTTAGACTT	NA	False	NA	-4	True	AATAAA	-19	NA	46464466	46458314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46459211_46463704_46463968_46464368
ES.15276.2	chr17	-	1209	3	NNC	ENSMUSG00000034509.10	novel	1272	3	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTTTTGATTTAGACT	NA	False	NA	-5	True	AATAAA	-18	NA	46464461	46458315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46459211_46463704_46463968_46464410
ES.15277.1	chr17	-	2266	1	Genic_Genomic	ENSMUSG00000023953.10	novel	NA	NA	NA	NA	23882	2013	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATATGTGTATTTAAA	5128	False	NA	NA	False	AATAAA	-19	NA	46482533	46480267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_46480300_46482500
ES.15277.10	chr17	-	2963	10	FSM	ENSMUSG00000023953.10	ENSMUST00000233438.2	2130	10	34	-867	34	-3	multi-exon	FALSE	canonical	2	4	junction_7	6.99382443638054	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCTGGCTTGCATACT	7180	False	NA	-15	True	AATAAA	-12	NA	46513514	46482283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
ES.15277.11	chr17	-	1371	9	NNC	ENSMUSG00000023953.10	novel	3238	11	NA	NA	10	-9335	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.56500875656295	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTTTTTGGCTTTTTT	7156	False	NA	NA	False	TATAAA	-18	NA	46513538	46492485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46492630_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ES.15277.12	chr17	-	217	1	Intergenic	novelGene_12746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGTCCTTGTTAATCT	NA	False	NA	NA	False	NA	NA	NA	46496282	46496065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46496100_46496300
ES.15277.2	chr17	-	4092	10	FSM	ENSMUSG00000023953.10	ENSMUST00000233438.2	2130	10	22	-1984	22	1114	multi-exon	FALSE	canonical	2	4	junction_7	6.99382443638054	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGATAATGGTGGCACA	7168	False	NA	NA	False	AATAAA	-19	NA	46513526	46481166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
ES.15277.3	chr17	-	4285	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	33	-1080	10	1080	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACCTTTAATAAAAACT	7156	False	NA	NA	False	NA	NA	NA	46513538	46481200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ES.15277.4	chr17	-	3268	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	-18	-12	-18	12	multi-exon	FALSE	canonical	3	10	junction_7	5.44426303552648	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTTACTACCCTAATG	7105	False	NA	0	True	AATAAA	-27	NA	46513589	46482268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ES.15277.6	chr17	-	3100	11	NNC	ENSMUSG00000023953.10	novel	3238	11	NA	NA	38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.9562767398419	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTGCATACTTTTACT	7184	False	NA	-9	True	AATAAA	-18	NA	46513510	46482277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46484023_46485864_46486000_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
ES.15277.7	chr17	-	3524	7	ISM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	10841	0	3685	0	3prime_fragment	FALSE	canonical	3	18	junction_1	3.44802681092953	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	46502730	46482280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532
ES.15277.8	chr17	-	3117	10	NIC	ENSMUSG00000023953.10	novel	3238	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.86663881922667	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7120	False	NA	-12	True	AATAAA	-15	NA	46513574	46482280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46484023_46486076_46486247_46492391_46492458_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ES.15277.9	chr17	-	3148	11	NNC	ENSMUSG00000023953.10	novel	3238	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	7.60328876210814	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGCTTGCATACTTT	7125	False	NA	-13	True	AATAAA	-14	NA	46513569	46482281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505214_46505343_46509559_46509695_46510317_46510461_46513322
ES.15278.1	chr17	+	3874	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-90	-1296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	77.9414252168146	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTTGTCATCTCTTCTT	NA	False	NA	14	True	NA	NA	NA	46513617	46553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.12	chr17	+	2198	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	-61	0	-26	0	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46513681	46520595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
ES.15278.13	chr17	+	4914	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.5192871500143	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513681	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.16	chr17	+	5573	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-21	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	77.8193349296233	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513686	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.17	chr17	+	3899	4	NIC	ENSMUSG00000067150.7	novel	2137	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	299	junction_1	10.2089285540757	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46513690	46520595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46513952_46515580_46517486_46518704_46518843_46519000
ES.15278.18	chr17	+	2065	4	NIC	ENSMUSG00000067150.7	novel	2137	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	147.630921181468	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46513692	46520595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000
ES.15278.19	chr17	+	5145	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_22	95.3190898727721	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513693	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552817_46553059
ES.15278.2	chr17	+	4970	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-67	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	109.463443923328	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCCCTATTTTCCTTTT	NA	False	NA	15	True	AGTAAA	-17	NA	46513640	46554525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552392_46552481_46552651_46552817_46553059
ES.15278.21	chr17	+	4942	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	107.899587795197	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGGGCCCTATTTTCCT	NA	False	NA	12	True	AGTAAA	-14	NA	46513715	46554522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.22	chr17	+	5064	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	95.4598160632545	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513715	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533722_46535955_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.23	chr17	+	1974	5	NNC	ENSMUSG00000067150.7	novel	2137	5	NA	NA	-13	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	128.264131775021	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTAATGTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	46513729	46520426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518836_46519000
ES.15278.24	chr17	+	3628	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-1	-1296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	96.3584742280385	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTTGTCATCTCTTCTT	NA	False	NA	14	True	NA	NA	NA	46513741	46553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.25	chr17	+	5448	3	NIC	ENSMUSG00000067150.7	novel	2137	5	NA	NA	2	-26	intron_retention	FALSE	canonical	3	312	junction_1	6	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTGTCTCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46513744	46520569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46517486_46518704_46518843_46519000
ES.15278.26	chr17	+	5038	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.3785491495714	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCCCTATTTTCCTTTT	NA	False	NA	15	True	AGTAAA	-17	NA	46513744	46554525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519009_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.27	chr17	+	1966	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	2	169	2	-169	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTAATGTGGTGTAG	NA	False	NA	NA	False	NA	NA	NA	46513744	46520426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
ES.15278.29	chr17	+	4902	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	96.4823299884492	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTCATACAGAAGGGC	NA	False	NA	1	True	AGTAAA	-3	NA	46513744	46554511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.3	chr17	+	5152	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-66	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	77.9414252168146	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTATTTTCCTTTTTC	NA	False	NA	17	True	AGTAAA	-19	NA	46513641	46554527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.30	chr17	+	4031	23	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	106.021760202157	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513744	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46533598_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.31	chr17	+	6228	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	3	intron_retention	FALSE	non_canonical	0	0	junction_22	79.2239371795054	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTATTTTCCTTTTTC	NA	False	NA	17	True	AGTAAA	-19	NA	46513744	46554527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.32	chr17	+	3686	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2	-1304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	108.152203229872	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGCCTCGGTTGTCAT	NA	False	NA	6	True	NA	NA	NA	46513744	46553217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533589_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552392_46552481_46552651_46552817_46553059
ES.15278.34	chr17	+	3735	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	8	22543	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	104.947278771486	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACCTCTTCCTACCCC	NA	False	NA	NA	False	TTTAAA	-10	NA	46513750	46577067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059_46553212_46577050
ES.15278.35	chr17	+	6782	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_21	80.5756931745478	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513752	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.36	chr17	+	5186	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	14	-16	intron_retention	FALSE	non_canonical	0	0	junction_23	76.4447222217176	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTGTTTCATACAG	NA	False	NA	-5	True	ACTAAA	-18	NA	46513756	46554505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552817_46553059
ES.15278.37	chr17	+	5050	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	95.4623232007502	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513756	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528490_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.38	chr17	+	5013	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	105.426351333789	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46513756	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525483_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549310_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.39	chr17	+	5445	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	23	420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	77.9414252168146	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGAAAGGGACCTCTAG	NA	False	NA	NA	False	AATAAA	-20	NA	46513765	46554944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.4	chr17	+	5016	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	96.3584742280385	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGGGCCCTATTTTCC	NA	False	NA	11	True	AGTAAA	-13	NA	46513649	46554521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.41	chr17	+	3671	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	24	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	94.1631208771955	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513766	46553218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.43	chr17	+	3464	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	24	-1304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	112.025742327887	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGCCTCGGTTGTCAT	NA	False	NA	6	True	NA	NA	NA	46513766	46553217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.45	chr17	+	5012	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.491888604561	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513768	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537803_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.47	chr17	+	3979	3	NIC	ENSMUSG00000067150.7	novel	2137	5	NA	NA	26	0	intron_retention	FALSE	canonical	3	299	junction_1	6.5	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46513768	46520595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46513952_46515580_46517486_46518704
ES.15278.48	chr17	+	5010	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	94.9165908003291	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513768	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533598_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.49	chr17	+	3690	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	26	-1304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.170408097339	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGCCTCGGTTGTCAT	NA	False	NA	6	True	NA	NA	NA	46513768	46553217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533598_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547840_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.5	chr17	+	5089	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-55	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	94.3624094012679	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCCCTATTTTCCTTTT	NA	False	NA	15	True	AGTAAA	-17	NA	46513652	46554525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552392_46552481_46552651_46552817_46553059
ES.15278.50	chr17	+	3602	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	32	-1305	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.3785491495714	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGGCCTCGGTTGTCA	NA	False	NA	5	True	NA	NA	NA	46513774	46553216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518785_46519048_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.52	chr17	+	4265	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	54	-717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.9930156049842	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTCTGTTCCTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	46513796	46553804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.53	chr17	+	6296	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	67	0	intron_retention	FALSE	non_canonical	0	0	junction_22	78.4644647099706	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513809	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.54	chr17	+	5859	29	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	1836	1	intron_retention	FALSE	non_canonical	0	0	junction_22	81.2172697026881	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGGGCCCTATTTTCCT	NA	False	NA	12	True	AGTAAA	-14	NA	46515578	46554522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46550503_46551083_46551167_46551740_46552481_46552651_46552817_46553059
ES.15278.55	chr17	+	4194	1	NIC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	2659	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46516401	46520595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46516400_46520600
ES.15278.56	chr17	+	4722	30	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	3665	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	80.1887487993617	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46517407	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.57	chr17	+	4527	28	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	5058	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.204521278494	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46518800	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46518835_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546924_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.58	chr17	+	3368	25	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	11908	-1303	intron_retention	FALSE	non_canonical	0	0	junction_17	77.9042213768505	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	4854	False	NA	7	True	NA	NA	NA	46525650	46553218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.6	chr17	+	5129	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.9930156049842	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513652	46554524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525484_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.60	chr17	+	3938	18	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-7118	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	91.4243688789455	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46533676	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.62	chr17	+	5539	18	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-7021	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	91.2249207134188	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46533773	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.63	chr17	+	3943	17	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-6206	-1305	intron_retention	FALSE	non_canonical	0	0	junction_9	94.0309124703148	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGGCCTCGGTTGTCA	NA	False	NA	5	True	NA	NA	NA	46534588	46553216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.64	chr17	+	4013	9	NNC	ENSMUSG00000067150.7	novel	3145	13	NA	NA	4604	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	125.451621651535	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCCCTATTTTCCTT	NA	False	NA	13	True	AGTAAA	-15	NA	46545398	46554523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46545476_46546790_46546927_46547835_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552817_46553059
ES.15278.66	chr17	+	3433	8	ISM	ENSMUSG00000067150.7	ENSMUST00000232971.2	3145	13	7235	0	7235	0	3prime_fragment	FALSE	canonical	3	334	junction_2	29.1029138032042	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGGGCCCTATTTTCC	NA	False	NA	11	True	AGTAAA	-13	NA	46548029	46554521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.67	chr17	+	1461	1	NIC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	12264	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGAAGGGCCCTATTTT	NA	False	NA	9	True	AGTAAA	-11	NA	46553058	46554519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46553100_46554500
ES.15278.68	chr17	+	3464	1	Genic_Genomic	ENSMUSG00000067150.7	novel	NA	NA	NA	NA	12965	2699	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTTGTCTCCAGTCC	NA	False	NA	NA	False	NA	NA	NA	46553759	46557223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_46553800_46557200
ES.15278.69	chr17	+	1519	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	-5	521	-5	-1	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTAGCTCCTGTTGG	2575	False	NA	22	True	ATTAAA	-17	NA	46559000	46562942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ES.15278.70	chr17	+	3122	10	Fusion	ENSMUSG00000071074.10_ENSMUSG00000071073.6	novel	2035	9	NA	NA	11	1202	multi-exon	TRUE	canonical	0	0	junction_9	53.3124959293993	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGGTCTGAGCGTGAC	2591	False	NA	NA	False	AGTAAA	-20	NA	46559016	46564665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491_46563410_46563513
ES.15278.71	chr17	+	1672	8	NIC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	20	5	intron_retention	FALSE	canonical	3	158	junction_7	8.34461820943442	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTCTAGACCTGTAG	2600	False	NA	12	True	ATTAAA	-7	NA	46559025	46562932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46562154_46562289_46562414_46562491
ES.15278.72	chr17	+	1807	7	NIC	ENSMUSG00000071074.10	novel	1570	8	NA	NA	21	5	intron_retention	FALSE	canonical	3	158	junction_6	8.34665601703261	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTCTAGACCTGTAG	2601	False	NA	12	True	ATTAAA	-7	NA	46559026	46562932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46562414_46562491
ES.15278.73	chr17	+	2166	9	NNC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	-22	122	intron_retention	FALSE	canonical	0	0	junction_8	56.4047870308895	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTGTACAGTCTTTCC	2603	False	NA	NA	False	NA	NA	NA	46559028	46563585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491_46563410_46563513
ES.15278.74	chr17	+	1542	8	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	31	540	-14	-4	intron_retention	FALSE	canonical	3	160	junction_7	7.34569150410425	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTGATTGAAGTCTA	2611	False	NA	3	True	AATATA	-13	NA	46559036	46562923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289
ES.15278.75	chr17	+	1618	8	FSM	ENSMUSG00000071074.10	ENSMUST00000151488.2	1570	8	-33	-15	-13	-1	multi-exon	FALSE	canonical	3	158	junction_7	7.73542078324622	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTAGCTCCTGTTGG	2612	False	NA	22	True	ATTAAA	-17	NA	46559037	46562942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562414_46562491
ES.15278.76	chr17	+	1364	8	NIC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	59.6404191118467	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTAGCTCCTGTTG	2615	False	NA	21	True	ATTAAA	-16	NA	46559040	46562941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562289_46562414_46562491
ES.15278.77	chr17	+	2907	7	Fusion	ENSMUSG00000071074.10_ENSMUSG00000071073.6	novel	2035	9	NA	NA	-2	1206	intron_retention	FALSE	canonical	1	1	junction_6	62.2622143304696	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCTGAGCGTGACTTGC	2623	False	NA	NA	False	AGTAAA	-24	NA	46559048	46564669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_46559255_46559766_46559965_46560104_46561383_46561495_46561589_46561719_46562154_46562289_46562414_46564095
ES.15278.78	chr17	+	2916	6	NIC	ENSMUSG00000071074.10	novel	1570	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	158	junction_5	7.38647412504775	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGACCTGTAGCTCCTGTT	2625	False	NA	20	True	ATTAAA	-15	NA	46559050	46562940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46559255_46559766_46559965_46560104_46561383_46561495_46561589_46561719_46562414_46562491
ES.15278.79	chr17	+	1217	7	NIC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	62.634965385868	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTAGCTCCTGTTGG	2631	False	NA	22	True	ATTAAA	-17	NA	46559056	46562942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46562289_46562414_46562491
ES.15278.8	chr17	+	3803	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-38	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	94.9165908003291	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513669	46553218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533598_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15278.80	chr17	+	1639	11	Fusion	ENSMUSG00000071074.10_ENSMUSG00000071073.6	novel	2035	9	NA	NA	8	1199	multi-exon	FALSE	canonical	0	0	junction_9	67.565079737983	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAAGCGGTCTGAGCGT	2633	False	NA	NA	False	AGTAAA	-17	NA	46559058	46564662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491_46562728_46564095_46564273_46564446
ES.15278.81	chr17	+	1980	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	64	-9	-1	9	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGTTGCTTTTAGCTC	2644	False	NA	NA	False	NA	NA	NA	46559069	46563472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ES.15278.82	chr17	+	2339	1	Antisense	novelGene_ENSMUSG00000012296.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACCTCTTCCTACCCC	NA	False	NA	NA	False	TTTAAA	-10	NA	46574728	46577067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46574700_46577100
ES.15278.9	chr17	+	3797	31	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	-34	-1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.9930156049842	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCCTCGGTTGTCATC	NA	False	NA	7	True	NA	NA	NA	46513673	46553218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525489_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ES.15279.1	chr17	-	1100	1	Antisense	novelGene_ENSMUSG00000067150.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAGAAAAAAAAA	3575	False	NA	NA	False	NA	NA	NA	46552637	46551537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_46551500_46552600
ES.1528.1	chr1	-	175	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGAGTGAGGCGGGGG	NA	False	NA	NA	False	NA	NA	NA	143608608	143608433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_143608400_143608600
ES.15280.1	chr17	-	1434	9	NNC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-133	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	260.742179892322	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGCTTTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	46559113	46554850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46555147_46555231_46555341_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ES.15280.10	chr17	-	2154	1	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-28	-581	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTGAAGGGCAAAATGA	NA	False	NA	NA	False	NA	NA	NA	46558922	46556768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46556800_46558900
ES.15280.2	chr17	-	1550	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	-242	6	-242	-6	multi-exon	FALSE	canonical	3	702	junction_8	54.719597723302	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGGCTTTTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	46559222	46554851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ES.15280.4	chr17	-	1365	8	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-41	-7	intron_retention	FALSE	canonical	3	702	junction_7	54.3368180511002	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGCTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	46558935	46554852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46555147_46555231_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ES.15280.5	chr17	-	1538	6	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	702	junction_5	29.6809703345426	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCAGGCTTTTTTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	46558907	46554853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46555147_46555231_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ES.15280.6	chr17	-	1230	9	NNC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	260.522911660376	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCAGGCTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	46558910	46554854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557132_46558650_46558727_46558820
ES.15280.7	chr17	-	1125	8	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-18	-13	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	272.897005315566	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTTTCAGGCTTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	46558912	46554858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46558654_46558727_46558820
ES.15280.8	chr17	-	1362	8	NNC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-12	-13	intron_retention	FALSE	canonical	0	0	junction_7	278.556483115569	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTTTCAGGCTTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	46558906	46554858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46555147_46555231_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558759_46558820
ES.15280.9	chr17	-	1512	6	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	-18	-45	intron_retention	FALSE	canonical	3	702	junction_5	41.9742778377425	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCGTTGTTGTAAATAA	NA	False	NA	-8	True	ATTAAA	-27	NA	46558912	46554890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ES.15281.1	chr17	-	2938	13	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	137	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	146.517632613507	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTGTGTGAGTGTGCT	5826	False	NA	NA	False	NA	NA	NA	46593932	46568639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.12	chr17	-	2328	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	117.705936553769	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTCTCCTTCCCAC	5829	False	NA	-25	True	AATAAA	-23	NA	46593929	46568794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46593271_46593366_46593885
ES.15281.16	chr17	-	4764	8	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_4	112.444816397617	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5818	False	NA	-30	True	AATAAA	-18	NA	46593940	46568799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.17	chr17	-	3491	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	25	junction_3	127.447783425213	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5834	False	NA	-30	True	AATAAA	-18	NA	46593924	46568799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46572129_46572344_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.18	chr17	-	3256	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	0	intron_retention	FALSE	canonical	2	3	junction_10	148.887877276829	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5829	False	NA	-30	True	AATAAA	-18	NA	46593929	46568799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593885
ES.15281.19	chr17	-	3255	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	32	junction_3	115.043296197562	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5830	False	NA	-30	True	AATAAA	-18	NA	46593928	46568799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.2	chr17	-	4025	8	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-43	134	intron_retention	FALSE	canonical	3	80	junction_5	114.437577673042	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGGCTGTGTGAGTGT	5763	False	NA	NA	False	NA	NA	NA	46593995	46568642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ES.15281.21	chr17	-	3540	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	131	junction_6	92.6128274186094	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTAATTTCTTTCTCCT	5770	False	NA	-31	True	AATAAA	-17	NA	46593988	46568800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.22	chr17	-	3284	12	NNC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_10	150.717238398311	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5835	False	NA	-32	True	AATAAA	-16	NA	46593923	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571414_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46591341_46591471_46593304_46593366_46593885
ES.15281.23	chr17	-	4265	9	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	57	junction_5	127.762413780423	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5829	False	NA	-32	True	AATAAA	-16	NA	46593929	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.24	chr17	-	2488	11	NNC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.615312979238	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5834	False	NA	-32	True	AATAAA	-16	NA	46593924	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46576906_46576986_46593271_46593366_46593885
ES.15281.25	chr17	-	3862	8	NNC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	158.322455766704	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5826	False	NA	-32	True	AATAAA	-16	NA	46593932	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570747_46571682_46572129_46572344_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.26	chr17	-	2873	9	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	80	junction_6	107.306511917963	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5823	False	NA	-32	True	AATAAA	-16	NA	46593935	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ES.15281.28	chr17	-	2669	13	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	139.993154594549	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5834	False	NA	-32	True	AATAAA	-16	NA	46593924	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.29	chr17	-	3856	8	NNC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_4	124.518173413378	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5826	False	NA	-32	True	AATAAA	-16	NA	46593932	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574564_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.3	chr17	-	2582	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	5	-28	2	5	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCTTTTTGCTTTTAT	5824	False	NA	-2	True	NA	NA	NA	46593934	46568771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.30	chr17	-	3570	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	57	junction_6	116.752044949971	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5833	False	NA	-32	True	AATAAA	-16	NA	46593925	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.31	chr17	-	3376	9	NNC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-36	1	intron_retention	FALSE	canonical	2	3	junction_7	128.171759760097	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5770	False	NA	-32	True	AATAAA	-16	NA	46593988	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593304_46593366_46593885
ES.15281.32	chr17	-	3803	8	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	131	junction_5	102.652971964095	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5829	False	NA	-32	True	AATAAA	-16	NA	46593929	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.33	chr17	-	2790	10	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	82	junction_7	101.21594077351	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5833	False	NA	-32	True	AATAAA	-16	NA	46593925	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.34	chr17	-	3028	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-5	1	intron_retention	FALSE	canonical	3	131	junction_6	92.2216867454334	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5801	False	NA	-32	True	AATAAA	-16	NA	46593957	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.35	chr17	-	3329	10	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	57	junction_6	121.57495274851	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5832	False	NA	-32	True	AATAAA	-16	NA	46593926	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.36	chr17	-	4306	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	1	intron_retention	FALSE	canonical	3	131	junction_5	96.2418827746008	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5824	False	NA	-32	True	AATAAA	-16	NA	46593934	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.37	chr17	-	3430	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-21	1	intron_retention	FALSE	canonical	2	3	junction_8	131.524712506814	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5785	False	NA	-32	True	AATAAA	-16	NA	46593973	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593885
ES.15281.39	chr17	-	4629	7	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	131	junction_4	108.899673502214	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5824	False	NA	-32	True	AATAAA	-16	NA	46593934	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.4	chr17	-	2452	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	-9	-31	2	5	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCTTTTTGCTTTTAT	5824	False	NA	-2	True	NA	NA	NA	46593934	46568771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.40	chr17	-	5909	2	NIC	ENSMUSG00000012296.17	novel	2189	8	NA	NA	-71	1	intron_retention	FALSE	canonical	3	317	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	NA	False	NA	-32	True	AATAAA	-16	NA	46574784	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020
ES.15281.41	chr17	-	4379	7	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	131	junction_4	104.155999453811	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5837	False	NA	-32	True	AATAAA	-16	NA	46593921	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.43	chr17	-	2472	10	NNC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	126.383894895231	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5829	False	NA	-32	True	AATAAA	-16	NA	46593929	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572562_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.44	chr17	-	2450	10	NNC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.774555867257	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5824	False	NA	-32	True	AATAAA	-16	NA	46593934	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46591343_46591471_46593271_46593366_46593885
ES.15281.45	chr17	-	3457	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	57	junction_6	114.95112004674	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5834	False	NA	-32	True	AATAAA	-16	NA	46593924	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.46	chr17	-	3271	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	1	intron_retention	FALSE	canonical	2	3	junction_8	136.605671093846	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5829	False	NA	-32	True	AATAAA	-16	NA	46593929	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593885
ES.15281.47	chr17	-	2537	12	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	142.183213199387	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5833	False	NA	-32	True	AATAAA	-16	NA	46593925	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.48	chr17	-	2770	13	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	141.926306190533	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5829	False	NA	-32	True	AATAAA	-16	NA	46593929	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.49	chr17	-	2517	11	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5823	False	NA	-32	True	AATAAA	-16	NA	46593935	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.5	chr17	-	3472	10	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	5	intron_retention	FALSE	canonical	3	14	junction_6	131.553772510439	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCTTTTTGCTTTTAT	5834	False	NA	-2	True	NA	NA	NA	46593924	46568771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.50	chr17	-	2705	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-41	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5765	False	NA	-32	True	AATAAA	-16	NA	46593993	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.51	chr17	-	3733	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	82	junction_6	107.187919095391	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5823	False	NA	-32	True	AATAAA	-16	NA	46593935	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.52	chr17	-	2562	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	144.234704561697	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5817	False	NA	-32	True	AATAAA	-16	NA	46593941	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593885
ES.15281.54	chr17	-	3464	7	NIC	ENSMUSG00000012296.17	novel	2368	9	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_6	151.176956650881	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5834	False	NA	-32	True	AATAAA	-16	NA	46593924	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593885
ES.15281.55	chr17	-	3240	9	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	80	junction_6	106.299988240827	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	5824	False	NA	-32	True	AATAAA	-16	NA	46593934	46568801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ES.15281.57	chr17	-	3603	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_8	139.718323780383	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5834	False	NA	-33	True	AATAAA	-15	NA	46593924	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.58	chr17	-	2468	11	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	135.013925207736	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5807	False	NA	-33	True	AATAAA	-15	NA	46593951	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.59	chr17	-	4496	4	NIC	ENSMUSG00000012296.17	novel	2368	9	NA	NA	8	0	intron_retention	TRUE	canonical	0	0	junction_3	187.50348144916	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	6145	False	NA	-33	True	AATAAA	-15	NA	46593613	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46572129_46572344_46573357_46574614_46574737_46593577
ES.15281.6	chr17	-	2478	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	124.719933163849	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCTTTTTGCTTTTAT	5834	False	NA	-2	True	NA	NA	NA	46593924	46568771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593885
ES.15281.60	chr17	-	2433	11	NNC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	150.098267811457	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5836	False	NA	-33	True	AATAAA	-15	NA	46593922	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574734_46575808_46575905_46593271_46593366_46593885
ES.15281.62	chr17	-	2794	14	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	150.379205096462	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5834	False	NA	-33	True	AATAAA	-15	NA	46593924	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.63	chr17	-	3359	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	131	junction_6	96.4461475384061	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5819	False	NA	-33	True	AATAAA	-15	NA	46593939	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.64	chr17	-	2603	12	NNC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	132.333787843312	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5833	False	NA	-33	True	AATAAA	-15	NA	46593925	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593304_46593366_46593885
ES.15281.65	chr17	-	3928	9	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	131	junction_5	97.474355601871	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5833	False	NA	-33	True	AATAAA	-15	NA	46593925	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.67	chr17	-	3728	8	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	0	intron_retention	FALSE	canonical	2	3	junction_7	143.665711757169	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5824	False	NA	-33	True	AATAAA	-15	NA	46593934	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593885
ES.15281.68	chr17	-	3792	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	32	junction_1	124.21094708197	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5817	False	NA	-33	True	AATAAA	-15	NA	46593941	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.7	chr17	-	2409	10	NNC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	128.708206689145	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATCCCCTTTTTGCTTT	5828	False	NA	-5	True	AATAAA	-43	NA	46593930	46568774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593304_46593366_46593885
ES.15281.71	chr17	-	3693	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	80	junction_5	103.873044506263	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5828	False	NA	-33	True	AATAAA	-15	NA	46593930	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.73	chr17	-	3687	8	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	80	junction_5	112.793653027399	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5829	False	NA	-33	True	AATAAA	-15	NA	46593929	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ES.15281.74	chr17	-	2422	13	NNC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.340730152653	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5836	False	NA	-33	True	AATAAA	-15	NA	46593922	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46569303_46569545_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.75	chr17	-	4169	8	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	131	junction_5	101.569720700932	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5830	False	NA	-33	True	AATAAA	-15	NA	46593928	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.76	chr17	-	4402	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_5	127.783478133719	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5824	False	NA	-33	True	AATAAA	-15	NA	46593934	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.78	chr17	-	3127	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_7	142.751706073086	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5828	False	NA	-33	True	AATAAA	-15	NA	46593930	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.79	chr17	-	3118	10	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	32	junction_3	121.438599025735	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5834	False	NA	-33	True	AATAAA	-15	NA	46593924	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.8	chr17	-	2971	10	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	4	intron_retention	FALSE	canonical	3	14	junction_6	131.000801053059	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTCCTTCCCACTT	5834	False	NA	-23	True	AATAAA	-25	NA	46593924	46568792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
ES.15281.80	chr17	-	4851	9	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	57	junction_4	124.498995979887	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5825	False	NA	-33	True	AATAAA	-15	NA	46593933	46568802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46572129_46572344_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ES.15281.81	chr17	-	2910	10	NIC	ENSMUSG00000012296.17	novel	2412	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	25	junction_2	139.802859434894	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	5817	False	NA	-34	True	AATAAA	-14	NA	46593941	46568803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ES.15281.82	chr17	-	2454	10	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	117.081273871435	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	5824	False	NA	-34	True	AATAAA	-14	NA	46593934	46568803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46582725_46582856_46593271_46593366_46593885
ES.15281.84	chr17	-	2474	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	149.104024090566	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	5836	False	NA	-34	True	AATAAA	-14	NA	46593922	46568803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593885
ES.15281.85	chr17	-	2684	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	134.492557169102	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	5819	False	NA	-34	True	AATAAA	-14	NA	46593939	46568803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
ES.15281.87	chr17	-	2534	11	NIC	ENSMUSG00000012296.17	novel	2426	10	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	144.663091353669	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGGCTTAATTTCTT	5833	False	NA	-37	True	AATAAA	-11	NA	46593925	46568806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46591341_46591471_46593271_46593366_46593885
ES.15281.88	chr17	-	3262	8	NNC	ENSMUSG00000012296.17	novel	2368	9	NA	NA	480	-5	intron_retention	FALSE	canonical	1	3	junction_7	145.13920130379	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGGCTTAATTTCT	9281	False	NA	-38	True	AATAAA	-10	NA	46581217	46568807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46570410_46570862_46570947_46571020_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46581158
ES.15282.1	chr17	+	1803	6	NNC	ENSMUSG00000047428.15	novel	1532	6	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.6	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCTTCTGTGGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	46608339	46614195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46608447_46609317_46609625_46609728_46609938_46611876_46612008_46612569_46612715_46613291
ES.15282.2	chr17	+	1546	6	NNC	ENSMUSG00000047428.15	novel	1528	6	NA	NA	-97	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.22710574513201	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCTTCTGTGGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	46608756	46614195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46609005_46609493_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613368
ES.15282.3	chr17	+	1770	6	NNC	ENSMUSG00000047428.15	novel	1528	6	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.22710574513201	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGCTTCTGTGGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	46608785	46614195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46609005_46609317_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
ES.15282.4	chr17	+	192	1	Intergenic	novelGene_12747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGGCATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	46611041	46611233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46611000_46611200
ES.15283.1	chr17	+	1776	2	Antisense	novelGene_ENSMUSG00000032842.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACGAGCAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	46617238	46619252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46617643_46617880
ES.15284.1	chr17	+	173	1	Intergenic	novelGene_12748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATATGCACTA	NA	False	NA	NA	False	NA	NA	NA	46620172	46620345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46620200_46620300
ES.15285.1	chr17	-	4872	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	-4	-2	-4	2	multi-exon	TRUE	canonical	3	24	junction_18	9.45832966226067	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACTATTTCTGGT	7108	False	NA	8	True	GATAAA	-26	NA	46638953	46614144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.10	chr17	-	4878	22	NNC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.2586916998463	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTGTTTTAAAAAAAT	7140	False	NA	-4	True	GATAAA	-14	NA	46638921	46614156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46619296_46619403_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46625141_46625241_46626309_46626482_46627482_46627563_46632240_46632375_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.11	chr17	-	3146	1	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	17256	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTGTTTTAAAAAAAT	NA	False	NA	-4	True	GATAAA	-14	NA	46617302	46614156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614200_46617300
ES.15285.12	chr17	-	5183	20	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	24	junction_17	9.69478827347921	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGTGTTTTAAAAAAAT	7132	False	NA	-4	True	GATAAA	-14	NA	46638929	46614156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.13	chr17	-	4557	20	NNC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.0858074777121	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTGTGTTTTAAAAAAA	7119	False	NA	-5	True	GATAAA	-13	NA	46638942	46614157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615377_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.14	chr17	-	5234	19	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	2	1	intron_retention	FALSE	canonical	3	24	junction_17	9.92456112784071	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTGTGTTTTAAAAAAA	7140	False	NA	-5	True	GATAAA	-13	NA	46638921	46614157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46635841_46638697
ES.15285.15	chr17	-	5065	22	NNC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	16.3142328968094	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCTGTGTTTTAAAAAA	7131	False	NA	-6	True	GATAAA	-12	NA	46638930	46614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46632698_46632929_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.16	chr17	-	2973	5	NIC	ENSMUSG00000032842.14	novel	4885	20	NA	NA	13100	0	intron_retention	FALSE	canonical	3	40	junction_1	6.68954408012983	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCTGTGTTTTAAAAAA	8599	False	NA	-6	True	GATAAA	-12	NA	46621458	46614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46615402_46616326_46617048_46617474_46617645_46617882_46618227_46620963
ES.15285.17	chr17	-	5121	20	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_17	9.66273362215018	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCTGTGTTTTAAAAAA	7139	False	NA	-6	True	GATAAA	-12	NA	46638922	46614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.19	chr17	-	5678	14	NIC	ENSMUSG00000032842.14	novel	5266	20	NA	NA	1372	-2	intron_retention	FALSE	canonical	0	0	junction_9	14.3122407989242	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTCTGTGTTTTAAAA	6942	False	NA	-8	True	GATAAA	-10	NA	46633186	46614160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614952_46615082_46615181_46615255_46616593_46616886_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46624978_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062
ES.15285.20	chr17	-	3561	13	ISM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	-16	6352	2	4077	5prime_fragment	FALSE	canonical	3	24	junction_10	9.17726659862414	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTTGTGCATGCATT	7140	False	NA	NA	False	TTTAAA	-5	NA	46638921	46620510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.21	chr17	-	175	1	Intergenic	novelGene_12749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTAGAGCTGT	5997	False	NA	NA	False	NA	NA	NA	46624060	46623885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46623900_46624100
ES.15285.3	chr17	-	3356	18	NIC	ENSMUSG00000032842.14	novel	5266	20	NA	NA	1372	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	13.8743745767582	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTTTTAAAAAAATACTA	6942	False	NA	0	True	GATAAA	-18	NA	46633186	46614152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624978_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062
ES.15285.4	chr17	-	4742	21	NNC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	13.0053835006892	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7139	False	NA	-3	True	GATAAA	-15	NA	46638922	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633132_46634277_46634506_46634618_46635841_46638697
ES.15285.5	chr17	-	5223	18	NNC	ENSMUSG00000032842.14	novel	4885	20	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_16	13.9236673369744	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7140	False	NA	-3	True	GATAAA	-15	NA	46638921	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633132_46634277_46635841_46638697
ES.15285.6	chr17	-	4919	20	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	9.68163581334067	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7181	False	NA	-3	True	GATAAA	-15	NA	46638880	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.7	chr17	-	4914	20	FSM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	-26	-3	-8	0	multi-exon	FALSE	canonical	3	24	junction_17	9.55491490762564	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7130	False	NA	-3	True	GATAAA	-15	NA	46638931	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ES.15285.8	chr17	-	4995	20	NNC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_17	13.329200652241	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7180	False	NA	-3	True	GATAAA	-15	NA	46638881	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633132_46634277_46634506_46634618_46635841_46638697
ES.15285.9	chr17	-	6361	19	NIC	ENSMUSG00000032842.14	novel	4866	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	35	junction_13	8.18007214191376	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTGTTTTAAAAAAATA	7140	False	NA	-3	True	GATAAA	-15	NA	46638921	46614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46634506_46634618_46635841_46638697
ES.15286.1	chr17	-	225	1	Intergenic	novelGene_12750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTAGGAAAGCTATAAC	NA	False	NA	NA	False	NA	NA	NA	46683314	46683089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46683100_46683300
ES.15287.1	chr17	+	2520	1	Intergenic	novelGene_12751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATTTTGGTTCTAAA	8268	False	NA	NA	False	NA	NA	NA	46690305	46692825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46690300_46692800
ES.15288.1	chr17	+	8023	10	FSM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	-167	5204	-167	3499	multi-exon	FALSE	canonical	3	36	junction_4	9.25496196575947	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTGTATGTTTGTCTT	NA	False	NA	28	True	AATAAA	-18	NA	46694489	46725746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
ES.15288.10	chr17	+	1523	3	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	39	22553	19	-11890	5prime_fragment	FALSE	canonical	3	52	junction_1	7	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTTGATTTTTTTTCC	NA	False	NA	NA	False	AATACA	-13	NA	46694695	46708397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46695257_46697637_46697790_46707587
ES.15288.11	chr17	+	7033	10	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	23	2727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.1903515328563	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTTTGATTTTGGCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	46694699	46724974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721206_46721318_46721559
ES.15288.12	chr17	+	4570	13	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.6272207120495	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	46694701	46731846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46718167_46718244_46719944_46720146_46720605_46720706_46721198_46721318_46721559_46721804_46725095_46725216_46731340
ES.15288.13	chr17	+	6009	11	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	28	3420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	17.409480176042	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTTGGCTTGGACAAG	NA	False	NA	14	True	AATAAA	-15	NA	46694704	46725667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559_46723863_46725582
ES.15288.14	chr17	+	4030	3	FSM	ENSMUSG00000015597.18	ENSMUST00000136017.2	958	3	-352	-2720	-352	2720	multi-exon	FALSE	canonical	3	51	junction_2	0.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAAGTGTTCTTTGATT	8724	False	NA	NA	False	ATTAAA	-22	NA	46720202	46724967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46720706_46721198_46721318_46721559
ES.15288.15	chr17	+	8279	1	NIC	ENSMUSG00000015597.18	novel	3936	8	NA	NA	3013	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	46723567	46731846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46723600_46731800
ES.15288.16	chr17	+	173	1	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	32569	3552	6671	-3552	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGATTTTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	46727225	46727398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46727200_46727400
ES.15288.2	chr17	+	7201	10	FSM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	-117	5976	-117	2727	multi-exon	FALSE	canonical	3	36	junction_4	9.25496196575947	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTTTGATTTTGGCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	46694539	46724974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
ES.15288.3	chr17	+	3960	9	NNC	ENSMUSG00000015597.18	novel	3936	8	NA	NA	-115	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.8842194535885	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGTGAGCTTCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	46694541	46731839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46731340_46731494_46731597
ES.15288.4	chr17	+	3992	8	FSM	ENSMUSG00000015597.18	ENSMUST00000138127.8	3936	8	-56	0	-36	0	multi-exon	FALSE	canonical	0	0	junction_7	19.5948764648688	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	46694620	46731846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46731340
ES.15288.5	chr17	+	4568	11	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	-8	3495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.409480176042	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTTCCTGTATGTTTG	NA	False	NA	24	True	AATAAA	-14	NA	46694648	46725742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559_46721804_46725095
ES.15288.6	chr17	+	7814	10	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	-6	3421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.0705066303229	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGGCTTGGACAAGT	NA	False	NA	15	True	AATAAA	-16	NA	46694650	46725668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716678_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
ES.15288.7	chr17	+	8219	10	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	-3	3497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.7826382244655	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCCTGTATGTTTGTC	NA	False	NA	26	True	AATAAA	-16	NA	46694653	46725744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720350_46720447_46720706_46721198_46721318_46721559
ES.15288.8	chr17	+	4405	11	NNC	ENSMUSG00000015597.18	novel	13060	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.409480176042	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	46694670	46731846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559_46721804_46731340
ES.15288.9	chr17	+	2981	4	ISM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	38	19761	18	-9098	5prime_fragment	FALSE	canonical	3	45	junction_3	8.73053390247253	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGTTTATTTCTCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	46694694	46711189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565
ES.15289.1	chr17	-	177	1	Intergenic	novelGene_12752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	46739200	46739023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46739000_46739200
ES.1529.1	chr1	+	695	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-114	-1	-56	1	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGATTGGCCAGTTTTT	NA	False	NA	32	True	AATAAA	-19	NA	143615238	143622515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ES.1529.10	chr1	+	712	4	NNC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	248.583989830399	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCCCGATTGGCCAGT	NA	False	NA	28	True	AATAAA	-15	NA	143615320	143622511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143615497_143617385_143617450_143620784_143620962_143622216
ES.1529.11	chr1	+	3639	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	32	-334	-21	59	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTGCATCAAAAGGAAT	NA	False	NA	NA	False	AAAAAG	-18	NA	143615326	143625473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ES.1529.12	chr1	+	4185	2	FSM	ENSMUSG00000018196.19	ENSMUST00000148600.3	1651	2	27	-2561	-17	2	multi-exon	FALSE	canonical	3	459	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAACTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	143615330	143621404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385
ES.1529.13	chr1	+	4006	3	NIC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	-14	0	intron_retention	FALSE	canonical	3	459	junction_1	67.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCCGATTGGCCAGTT	NA	False	NA	29	True	AATAAA	-16	NA	143615333	143622512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143615497_143617385_143620962_143622245
ES.1529.14	chr1	+	791	5	NNC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	256.388864812807	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCCCGATTGGCCAGT	NA	False	NA	28	True	AATAAA	-15	NA	143615333	143622511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143615497_143617385_143617450_143620784_143620962_143621711_143621833_143622245
ES.1529.15	chr1	+	714	5	NNC	ENSMUSG00000018196.19	novel	580	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	237.857494100985	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCGATTGGCCAGTTT	NA	False	NA	30	True	AATAAA	-17	NA	143615343	143622513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143615423_143617385_143617450_143620784_143620962_143621706_143621833_143622245
ES.1529.16	chr1	+	8130	2	FSM	ENSMUSG00000018196.19	ENSMUST00000148600.3	1651	2	47	-6526	-2	-45	multi-exon	FALSE	canonical	3	459	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143615350	143625369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385
ES.1529.17	chr1	+	3476	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	91	-230	2	-45	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143615385	143625369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ES.1529.18	chr1	+	142	1	FSM	ENSMUSG00000018196.19	ENSMUST00000190211.2	2250	1	346	1762	346	797	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGGAAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	143619498	143619640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143619500_143619600
ES.1529.2	chr1	+	3165	4	NIC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	251.93958711476	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCGATTGGCCAGTTT	NA	False	NA	30	True	AATAAA	-17	NA	143615245	143622513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143615497_143617385_143617450_143618379_143620962_143622245
ES.1529.3	chr1	+	764	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	-47	2620	-47	5	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGGCCAGTTTTTGAGC	NA	False	NA	36	True	AATAAA	-23	NA	143615247	143622519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ES.1529.4	chr1	+	1800	5	NNC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	265.822309071304	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCGATTGGCCAGTTT	NA	False	NA	30	True	AATAAA	-17	NA	143615287	143622513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143615497_143617385_143617450_143618379_143619462_143620784_143620962_143622245
ES.1529.5	chr1	+	4487	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	0	-1150	0	875	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGATGGTACTCAACT	NA	False	NA	NA	False	ATTAAA	-15	NA	143615294	143626289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ES.1529.6	chr1	+	3534	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	-52	-2902	-3	2	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGCTGAATTTTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	143615300	143625416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ES.1529.7	chr1	+	6934	3	NIC	ENSMUSG00000018196.19	novel	3337	4	NA	NA	3	-1	intron_retention	FALSE	canonical	3	459	junction_1	67.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTGCTGAATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143615306	143625413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143615497_143617385_143620962_143622245
ES.1529.8	chr1	+	2235	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	13	1089	4	1003	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTCACTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	143615307	143624050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ES.1529.9	chr1	+	3949	3	NIC	ENSMUSG00000018196.19	novel	580	4	NA	NA	14	0	intron_retention	FALSE	canonical	3	64	junction_1	265	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCCGATTGGCCAGTTT	NA	False	NA	30	True	AATAAA	-17	NA	143615317	143622513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143615423_143617385_143620962_143622245
ES.15290.1	chr17	+	2912	4	Antisense	novelGene_ENSMUSG00000091742.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGCAGTGGTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	46747880	46751401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46748369_46748584_46748622_46748704_46750937_46751246
ES.15290.2	chr17	+	1631	4	Antisense	novelGene_ENSMUSG00000091742.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGCAGTGGTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	46747884	46751401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46748369_46748541_46748622_46748704_46748870_46750499
ES.15290.3	chr17	+	1258	5	Antisense	novelGene_ENSMUSG00000091742.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.08220700148449	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCAGTGGTGGTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	46747906	46751403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46748369_46748584_46748622_46748704_46748870_46750499_46750937_46751246
ES.15290.4	chr17	+	858	4	Antisense	novelGene_ENSMUSG00000091742.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.39934634239519	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCAGTGGTGGTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	46748049	46751403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46748369_46748584_46748622_46750591_46750937_46751246
ES.15290.5	chr17	+	3278	1	Antisense	novelGene_ENSMUSG00000067144.8_AS_novelGene_ENSMUSG00000091742.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGCAGTGGTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	46748123	46751401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46748100_46751400
ES.15291.1	chr17	-	1634	10	NNC	ENSMUSG00000067144.8	novel	1989	10	NA	NA	-19	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	11.5960827783553	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGACTTATTGTCATG	3626	False	NA	NA	False	NA	NA	NA	46748574	46743098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748478
ES.15291.2	chr17	-	1989	10	FSM	ENSMUSG00000067144.8	ENSMUST00000087012.7	1989	10	-57	57	-57	-57	multi-exon	FALSE	canonical	3	9	junction_9	10.8297714942322	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGGAAGTCATTGACT	2760	False	NA	NA	False	AATAAA	-33	NA	46749440	46743165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748922
ES.15292.1	chr17	-	177	1	Intergenic	novelGene_12753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	2037	False	NA	NA	False	NA	NA	NA	46750163	46749986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46750000_46750200
ES.15293.1	chr17	+	1193	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	0	-3	0	3	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCACGGTGTCTGT	NA	False	NA	17	True	NA	NA	NA	46807636	46810553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ES.15293.10	chr17	+	1566	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	62	-438	62	438	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAGTCAAAAAAAC	NA	False	NA	-21	True	NA	NA	NA	46807698	46810988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ES.15293.11	chr17	+	1078	4	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	65	-4	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	305.473403097553	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCACGG	NA	False	NA	10	True	NA	NA	NA	46807701	46810546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46807856_46809350_46809420_46809568_46809680_46809802
ES.15293.12	chr17	+	890	7	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	67	464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	313.820233396269	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGCAGTGCTAGAACC	NA	False	NA	5	True	NA	NA	NA	46807703	46811014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46807899_46808996_46809085_46809190_46809262_46809350_46809420_46809568_46809680_46809802_46810024_46810879
ES.15293.13	chr17	+	1126	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	73	462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	285.793959873193	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGGCAGTGCTAGAA	NA	False	NA	3	True	NA	NA	NA	46807709	46811012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46810360_46810812
ES.15293.14	chr17	+	589	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	80	521	80	-521	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATACCTTGTGCCCAGA	NA	False	NA	44	True	NA	NA	NA	46807716	46810029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ES.15293.15	chr17	+	1188	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	86	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	332.475938979049	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCACGG	NA	False	NA	10	True	NA	NA	NA	46807722	46810546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46807899_46808996_46809085_46809350_46809420_46809568_46809680_46809802
ES.15293.18	chr17	+	1999	3	NIC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	92	-551	intron_retention	FALSE	canonical	3	629	junction_1	36	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAACTACATGTATGT	NA	False	NA	14	True	NA	NA	NA	46807728	46809999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46809420_46809568_46809680_46809802
ES.15293.19	chr17	+	2234	4	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	138	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	313.920372069097	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCACGG	NA	False	NA	10	True	NA	NA	NA	46807774	46810546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46809085_46809350_46809420_46809568_46809680_46809802
ES.15293.2	chr17	+	604	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	50	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	278.036306082497	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCACGG	NA	False	NA	10	True	NA	NA	NA	46807686	46810546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802_46809894_46810425
ES.15293.3	chr17	+	744	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	50	396	50	-396	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCTCTTTGGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	46807686	46810154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ES.15293.4	chr17	+	1993	5	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	50	-404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	333.223929963021	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGAACCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	46807686	46810146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46809085_46809190_46809262_46809350_46809420_46809568_46809680_46809802
ES.15293.5	chr17	+	2716	2	NIC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	51	2	intron_retention	FALSE	canonical	3	629	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCACGGTGTCTG	NA	False	NA	16	True	NA	NA	NA	46807687	46810552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46809420_46809568
ES.15293.7	chr17	+	2586	3	NIC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	54	-2	intron_retention	FALSE	canonical	3	629	junction_1	36	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCACGGTG	NA	False	NA	12	True	NA	NA	NA	46807690	46810548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46809420_46809568_46809680_46809802
ES.15293.9	chr17	+	2520	3	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	62	-6	intron_retention	FALSE	canonical	2	5	junction_2	312	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTTGCCTTGGTCAC	NA	False	NA	8	True	NA	NA	NA	46807698	46810544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46809420_46809568_46810249_46810425
ES.15294.1	chr17	-	3521	19	ISM	ENSMUSG00000040327.17	ENSMUST00000182485.8	7848	41	25140	7	-583	-2	intron_retention	TRUE	canonical	0	0	junction_4	2.16381578823894	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGGAGGAGCACCCCT	128	False	NA	NA	False	AATAAA	-18	NA	46832174	46811537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46811857_46811932_46812007_46812678_46812813_46813055_46813174_46813310_46813422_46813538_46813614_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698
ES.15294.2	chr17	-	3376	20	ISM	ENSMUSG00000040327.17	ENSMUST00000182315.8	8451	39	25136	-3	-500	-3	3prime_fragment	FALSE	canonical	0	0	junction_4	2.0841041971814	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGGAGGAGCACCCC	211	False	NA	NA	False	AATAAA	-17	NA	46832091	46811538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46811857_46811932_46812007_46812678_46812813_46813055_46813174_46813310_46813422_46813613_46813713_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966
ES.15294.3	chr17	-	5230	30	NIC	ENSMUSG00000040327.17	novel	7848	41	NA	NA	-2227	2	intron_retention	TRUE	canonical	0	0	junction_3	1.7636843934544	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCCAGGAGGAGCACCC	NA	False	NA	NA	False	AATAAA	-16	NA	46838909	46811539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46811857_46811932_46812007_46812678_46813174_46813310_46813422_46813613_46813713_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824
ES.15294.5	chr17	-	7087	21	NNC	ENSMUSG00000040327.17	novel	7848	41	NA	NA	2516	9	intron_retention	FALSE	canonical	0	0	junction_2	1.35646599662505	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTAGCCACATCCTA	3985	False	NA	NA	False	AATAAA	-24	NA	46854711	46830376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46830858_46830937_46831007_46831407_46831882_46831966_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46853400_46854105
ES.15294.6	chr17	-	178	1	Intergenic	novelGene_12754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46847458	46847280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_46847300_46847500
ES.15294.7	chr17	-	3290	7	NIC	ENSMUSG00000040327.17	novel	7848	41	NA	NA	37	-7449	intron_retention	FALSE	canonical	0	0	junction_6	2.26691175145591	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCCTGGGTGTGGTGG	1419	False	NA	NA	False	AATAAA	-16	NA	46857277	46847968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105_46854710_46857171
ES.15295.1	chr17	-	4122	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-17	-1489	-17	1489	multi-exon	FALSE	canonical	3	76	junction_2	5.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGGGTCTTTGGCTGTG	NA	False	NA	-3	True	AATAAA	-20	NA	46867118	46857765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
ES.15295.2	chr17	-	2658	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	-39	-3	-39	3	multi-exon	FALSE	canonical	3	76	junction_2	5.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTTTTAATGGCGTT	NA	False	NA	-2	True	TATAAA	-21	NA	46867140	46859251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
ES.15295.4	chr17	-	2556	7	NNC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.4836818403157	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTTTTTTAATGGCG	NA	False	NA	-4	True	TATAAA	-19	NA	46867136	46859253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864657_46866253
ES.15295.5	chr17	-	3826	5	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	76	junction_3	5.22015325445528	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAACTTTTTTTTAAT	NA	False	NA	-8	True	TATAAA	-15	NA	46867118	46859257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46860105_46860361_46861947_46862456_46862719_46864485_46864753_46866253
ES.15296.1	chr17	+	172	1	Intergenic	novelGene_12755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	46869875	46870047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_46869900_46870000
ES.15297.1	chr17	+	120	1	Antisense	novelGene_ENSMUSG00000023972.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGCCGCGCGCGCC	NA	False	NA	NA	False	NA	NA	NA	46940237	46940357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_46940200_46940400
ES.15298.1	chr17	-	4136	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	21128	21	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_19	116.046819283977	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCTTTGTCCATGAATGG	NA	False	NA	1	True	AATAAA	-38	NA	46919302	46875375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46919185
ES.15298.10	chr17	-	4271	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	19719	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	117.300546812658	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGTTAGACCCTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	46920711	46875395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46920439
ES.15298.11	chr17	-	4022	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.748421427517	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGTTAGACCCTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	46940382	46875395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876256_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.13	chr17	-	4441	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	117.284180294567	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGTTAGACCCTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	46940404	46875395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46884966_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.14	chr17	-	2796	13	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	-13361	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	145.222315204425	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGTTAGACCCTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	46897237	46875395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46887150_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126
ES.15298.15	chr17	-	3967	21	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.598549292738	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940356	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46875859_46876052_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.16	chr17	-	4359	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	14	0	intron_retention	FALSE	canonical	3	399	junction_14	36.3566438984067	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940416	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.17	chr17	-	4281	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	117.564575288991	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940416	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887129_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.19	chr17	-	4884	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	47	0	intron_retention	FALSE	canonical	3	399	junction_14	42.2530589147617	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940383	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.2	chr17	-	4279	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	-24	-20	-24	20	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCTTTGTCCATGAATG	NA	False	NA	0	True	AATAAA	-37	NA	46940454	46875376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.20	chr17	-	5808	2	ISM	ENSMUSG00000023972.11	ENSMUST00000232855.2	2819	5	2065	0	2065	0	intron_retention	FALSE	canonical	3	527	junction_1	0	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46881811	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46876422_46877028
ES.15298.21	chr17	-	4794	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	48	0	intron_retention	FALSE	canonical	3	399	junction_14	41.4959465520057	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940382	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.22	chr17	-	4064	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	117.300546812658	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940403	46875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902596_46940204
ES.15298.23	chr17	-	4168	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_3	110.265984136622	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940382	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46878985_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.24	chr17	-	4230	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	114.03991622706	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940414	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890367_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.26	chr17	-	4826	19	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	75	-1	intron_retention	FALSE	canonical	0	0	junction_6	119.944187123392	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940355	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887129_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.29	chr17	-	4172	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	117.470194251121	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940356	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887674_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.3	chr17	-	4027	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	48	19	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	116.494542340239	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCCTTTGTCCATGAAT	NA	False	NA	-1	True	AATAAA	-36	NA	46940382	46875377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46876422_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.30	chr17	-	3301	15	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	134.968117928431	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940420	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46878993_46887528_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.31	chr17	-	4209	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	117.284180294567	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTGTTAGACCCTT	NA	False	NA	-21	True	AATAAA	-16	NA	46940412	46875397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885204_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.33	chr17	-	5848	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	27	-3	intron_retention	FALSE	canonical	3	399	junction_14	38.2898303875991	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTGTTTGTTAGACCC	NA	False	NA	-23	True	AATAAA	-14	NA	46940403	46875399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46876422_46877028_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.35	chr17	-	4184	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_15	115.601426248522	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTGTTTGTTAGACCC	NA	False	NA	-23	True	AATAAA	-14	NA	46940400	46875399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897771_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.36	chr17	-	4227	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.236238144593	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCCTGTTTGTTAGACC	NA	False	NA	-24	True	AATAAA	-13	NA	46940403	46875400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877231_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.38	chr17	-	3047	15	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	15	8452	15	-8452	5prime_fragment	FALSE	canonical	3	399	junction_10	41.200666231982	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46940415	46883848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.39	chr17	-	2606	14	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	40	9564	40	-9564	5prime_fragment	FALSE	canonical	3	399	junction_9	42.4434186533348	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTCTATTACACGTC	NA	False	NA	NA	False	GATAAA	-15	NA	46940390	46884960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.40	chr17	-	3215	13	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	18	10765	18	-10765	5prime_fragment	FALSE	canonical	3	399	junction_8	43.6471807667905	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGGCATGGTAATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	46940412	46886161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.41	chr17	-	3615	7	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	75	19426	75	-19426	5prime_fragment	FALSE	canonical	3	399	junction_2	36.3715395452116	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATCTTGTAAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	46940355	46894822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.42	chr17	-	2426	7	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	26	20664	26	-20664	5prime_fragment	FALSE	canonical	3	399	junction_2	36.3715395452116	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACATTTTGATGG	NA	False	NA	NA	False	AATAAA	-20	NA	46940404	46896060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.6	chr17	-	3763	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	-18661	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.300546812658	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTCACCGCCTTTGT	NA	False	NA	-9	True	AATAAA	-28	NA	46902537	46875385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876193_46876247_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440
ES.15298.7	chr17	-	3914	19	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	45	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	120.456910486491	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGACCCTTCACCGCCT	NA	False	NA	-13	True	AATAAA	-24	NA	46940385	46875389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46885324_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ES.15298.8	chr17	-	4131	20	NNC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	21102	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	114.586598879011	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTAGACCCTTCACC	NA	False	NA	-17	True	AATAAA	-20	NA	46919328	46875393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46919198
ES.15299.1	chr17	-	2329	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	-16	0	-16	0	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	False	NA	-2	True	AATAAA	-18	NA	46956964	46941549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ES.15299.10	chr17	-	2165	14	NNC	ENSMUSG00000003546.11	novel	2313	16	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.0980254689132	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTTTGTGTTCGGAG	NA	False	NA	-11	True	AATAAA	-9	NA	46956977	46941558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951049_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ES.15299.2	chr17	-	5087	14	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_4	32.3018309701427	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956963	46941552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46944605_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951631_46953039_46953271_46955174
ES.15299.3	chr17	-	4272	14	NIC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	12	-3	intron_retention	FALSE	canonical	3	64	junction_7	21.3956805904602	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTCGGAGTCTTCA	NA	False	NA	-5	True	AATAAA	-15	NA	46956936	46941552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951631_46953039_46953271_46955174
ES.15299.4	chr17	-	2366	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	30.5511226266728	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTCGGAGTCTTC	NA	False	NA	-6	True	AATAAA	-14	NA	46956932	46941553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956900
ES.15299.5	chr17	-	2580	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	283	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	32.0511675879366	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956665	46941556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956416
ES.15299.6	chr17	-	3211	14	NNC	ENSMUSG00000003546.11	novel	2313	16	NA	NA	12	0	intron_retention	FALSE	canonical	1	4	junction_2	33.1798042231117	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956936	46941556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942815_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46951631_46953039_46953271_46955174_46955439_46956900
ES.15299.7	chr17	-	2820	15	NNC	ENSMUSG00000003546.11	novel	2313	16	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_14	31.7230521989346	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956955	46941556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951631_46953039_46953271_46955174_46955434_46956900
ES.15299.8	chr17	-	2462	16	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	328	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.8727855706104	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956620	46941556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956416
ES.15299.9	chr17	-	2586	17	NNC	ENSMUSG00000003546.11	novel	2322	16	NA	NA	268	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	36.9678914735477	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTTTGTGTTCGGAG	NA	False	NA	-11	True	AATAAA	-9	NA	46956680	46941558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943810_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006_46956080_46956416
ES.153.1	chr1	-	178	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAATTTAATATTGA	NA	False	NA	NA	False	NA	NA	NA	16822108	16821930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16821900_16822100
ES.1530.1	chr1	-	6567	1	ISM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	19712	0	13670	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTCTTTTAATCATTT	NA	False	NA	-1	True	AATAAA	-17	NA	143633094	143626527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_143626500_143633100
ES.1530.2	chr1	-	8326	10	NNC	ENSMUSG00000018199.10	novel	8738	9	NA	NA	77	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.33333333333333	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGTCTTTTAATCA	NA	False	NA	-4	True	AATAAA	-14	NA	143652729	143626530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143631090_143631427_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652652
ES.1530.3	chr1	-	6474	2	NNC	ENSMUSG00000018199.10	novel	4335	7	NA	NA	13424	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAACTGTCTTTTAAT	NA	False	NA	-6	True	AATAAA	-12	NA	143633340	143626532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143631096_143631429
ES.1530.4	chr1	-	7189	6	NNC	ENSMUSG00000018199.10	novel	8738	9	NA	NA	19	276	intron_retention	FALSE	canonical	0	0	junction_4	11.7711511756497	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAACAGATAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	143652787	143631309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646025_143646765_143652658
ES.1530.5	chr1	-	3936	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	20	4782	20	276	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAACAGATAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	143652786	143631309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ES.1530.6	chr1	-	3382	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	20	5336	20	-278	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGCTTTAAACCCTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	143652786	143631863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ES.1530.7	chr1	-	2795	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	72	5871	72	-813	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAATACATTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	143652734	143632398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ES.1530.8	chr1	-	2576	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	42	6120	42	-1062	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTCTGTACCCCTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	143652764	143632647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ES.1530.9	chr1	-	2090	4	NIC	ENSMUSG00000018199.10	novel	8738	9	NA	NA	26	-8927	intron_retention	FALSE	canonical	3	18	junction_2	8.52447456836295	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143652780	143640512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_143641659_143642327_143642549_143646163_143646765_143652658
ES.15300.1	chr17	+	934	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	397.240236576754	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957116	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46957191_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ES.15300.11	chr17	+	987	7	NNC	ENSMUSG00000002767.14	novel	998	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	503.236414510008	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957213	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959933_46960035_46960809
ES.15300.12	chr17	+	992	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	404.152920728446	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957219	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959933_46960035_46960809
ES.15300.13	chr17	+	845	8	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	394.086284968153	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957220	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809_46960857_46960975
ES.15300.14	chr17	+	1532	1	NIC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	-412	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46959525	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46959500_46961100
ES.15300.15	chr17	+	435	3	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	2387	8	-355	0	3prime_fragment	FALSE	canonical	3	1097	junction_2	41	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46959582	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46959696_46959960_46960035_46960809
ES.15300.2	chr17	+	1070	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	-33	-6	-33	-1	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTTTTCACTTGGGAG	NA	False	NA	34	True	AATAAA	-23	NA	46957121	46961064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ES.15300.4	chr17	+	1287	6	NIC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	984	junction_4	69.5269731830748	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTTTTCACTTGGGAG	NA	False	NA	34	True	AATAAA	-23	NA	46957169	46961064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46960035_46960809
ES.15300.5	chr17	+	1004	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	-6	0	1	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957169	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ES.15300.6	chr17	+	1790	6	ISM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	15	1	1	0	intron_retention	FALSE	canonical	3	984	junction_4	76.8754837383154	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957169	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960
ES.15300.7	chr17	+	1005	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	420.832277226398	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957169	46961057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960025_46960809
ES.15301.1	chr17	+	5545	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	-9	-6	-9	6	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGACTGCTAGAGATC	NA	False	NA	25	True	AATAAA	-26	NA	46961253	46975296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.10	chr17	+	5245	25	ISM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	1005	1	-81	-1	3prime_fragment	FALSE	canonical	3	53	junction_10	16.1546346978885	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46962267	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.12	chr17	+	3797	21	ISM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	3648	8	1092	-8	3prime_fragment	FALSE	canonical	3	53	junction_6	16.0533485603471	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTATGACCTGTATGG	NA	False	NA	11	True	AATAAA	-12	NA	46964910	46975282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.13	chr17	+	3599	20	ISM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	4095	10	1539	-10	3prime_fragment	FALSE	canonical	3	53	junction_5	16.2385267402102	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGCTATGACCTGTAT	NA	False	NA	9	True	AATAAA	-10	NA	46965357	46975280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.14	chr17	+	3470	21	NNC	ENSMUSG00000038545.14	novel	1321	5	NA	NA	2249	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.9988671674483	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46966067	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46966112_46966189_46966384_46966589_46966679_46966769_46966876_46967919_46968149_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.15	chr17	+	3382	19	ISM	ENSMUSG00000038545.14	ENSMUST00000145567.8	5016	25	4090	1	2620	-1	3prime_fragment	FALSE	canonical	3	53	junction_4	16.5615201783316	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46966438	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.16	chr17	+	2489	14	NNC	ENSMUSG00000038545.14	novel	5016	25	NA	NA	-3791	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	26.4389438419784	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46968921	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973971_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.17	chr17	+	3178	10	NIC	ENSMUSG00000038545.14	novel	4047	21	NA	NA	-3070	-1	intron_retention	FALSE	canonical	3	60	junction_5	13.4971419013869	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46969642	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46974375_46974463_46974670_46974893
ES.15301.18	chr17	+	2291	11	ISM	ENSMUSG00000038545.14	ENSMUST00000133393.8	4047	21	6044	2	-2850	-2	3prime_fragment	FALSE	canonical	3	60	junction_4	16.1629205281719	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCTGTATGGGACTGC	NA	False	NA	17	True	AATAAA	-18	NA	46969862	46975288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.4	chr17	+	5256	26	NNC	ENSMUSG00000038545.14	novel	5530	26	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	20.911011453299	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTATGGGACTGCT	NA	False	NA	18	True	AATAAA	-19	NA	46961542	46975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974886
ES.15301.6	chr17	+	5337	25	NIC	ENSMUSG00000038545.14	novel	5530	26	NA	NA	49	0	intron_retention	FALSE	canonical	3	53	junction_10	16.3166900748896	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961546	46975290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.8	chr17	+	4359	21	NNC	ENSMUSG00000038545.14	novel	5530	26	NA	NA	54	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	23.41212292809	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCTGTATGGGACTGC	NA	False	NA	17	True	AATAAA	-18	NA	46961551	46975288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46961642_46962362_46962945_46963385_46963482_46966319_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ES.15301.9	chr17	+	5897	24	NNC	ENSMUSG00000038545.14	novel	5530	26	NA	NA	58	-3	intron_retention	FALSE	non_canonical	0	0	junction_23	19.8132109218101	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGACCTGTATGGGACTG	NA	False	NA	16	True	AATAAA	-17	NA	46961555	46975287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974375_46974463_46974664_46974893
ES.15302.1	chr17	-	4411	4	Antisense	novelGene_ENSMUSG00000038545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTATGTTTGTGTCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	46970573	46960628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_46963591_46963689_46964469_46964605_46965217_46970514
ES.15303.1	chr17	+	1140	4	NIC	ENSMUSG00000002768.9	novel	603	4	NA	NA	50	-3	intron_retention	FALSE	canonical	0	0	junction_1	433.248453225424	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGCCTGTGCTCCTGAA	NA	False	NA	2	True	AATAAA	-27	NA	46989768	46994034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_46990135_46992542_46992824_46992934_46993038_46993644
ES.15303.2	chr17	+	872	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	79	-6	-59	-3	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGCCTGTGCTCCTGAA	NA	False	NA	2	True	AATAAA	-27	NA	46991990	46994034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ES.15303.3	chr17	+	833	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	65	-225	-56	-1	multi-exon	FALSE	canonical	3	42	junction_1	413.462076723959	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCACACCGCCTGTGC	NA	False	NA	-5	True	AATAAA	-20	NA	46991993	46994027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
ES.15303.4	chr17	+	873	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	-17	3	-17	-3	multi-exon	FALSE	canonical	3	90	junction_1	390.850639275699	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGCCTGTGCTCCTGAA	NA	False	NA	2	True	AATAAA	-27	NA	46992032	46994034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ES.15303.5	chr17	+	712	4	NNC	ENSMUSG00000002768.9	novel	945	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	433.248453225424	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACACCGCCTGTGCTC	NA	False	NA	-3	True	AATAAA	-22	NA	46992050	46994029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46992089_46992637_46992824_46992934_46993038_46993644
ES.15303.6	chr17	+	6263	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	145	-5463	7	5454	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGCACCTTGTCAGAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	46992056	46999491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ES.15303.7	chr17	+	1603	4	NNC	ENSMUSG00000002768.9	novel	945	4	NA	NA	15	6717	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	373.303570242176	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATTAAAAAA	NA	False	NA	NA	False	AATGAA	-3	NA	46992064	47000754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_46992089_46992542_46992824_46992934_46993038_46999559
ES.15303.8	chr17	+	838	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233612.2	766	4	24	-96	24	1	multi-exon	FALSE	canonical	3	19	junction_1	424.297327616169	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACACCGCCTGTGCTC	NA	False	NA	-3	True	AATAAA	-22	NA	46992129	46994029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_46992199_46992542_46992824_46992934_46993038_46993644
ES.15304.1	chr17	+	3122	1	Intergenic	novelGene_12756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACCAAGGGCCGGGCA	NA	False	NA	NA	False	ACTAAA	-4	NA	47003420	47006542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47003400_47006500
ES.15304.2	chr17	+	191	1	Intergenic	novelGene_12757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAATTAAAATG	NA	False	NA	NA	False	NA	NA	NA	47003746	47003937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47003700_47003900
ES.15305.1	chr17	-	2712	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-3	561	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.326382569461	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGGTATTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	46985199	46976688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978172_46978367_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.11	chr17	-	1316	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	24	247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.326382569461	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	46985254	46978136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978168_46978366_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.12	chr17	-	1446	9	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	0	234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.444297499347	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCGGCCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	46985213	46978149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978168_46978366_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46984081_46984266_46985122
ES.15305.13	chr17	-	4394	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	0	233	intron_retention	TRUE	non_canonical	0	0	junction_1	200.242075720586	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTGCCCGGCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	46985213	46978150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978171_46978367_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46984003_46984038
ES.15305.14	chr17	-	1480	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-19	215	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_6	154.351330844063	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985232	46978168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985103
ES.15305.15	chr17	-	2838	6	ISM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	3	-203	3	200	intron_retention	FALSE	canonical	3	390	junction_2	22.7560980838104	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985275	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631
ES.15305.17	chr17	-	1339	6	FSM	ENSMUSG00000023971.10	ENSMUST00000232697.2	537	6	-17	-785	-17	200	multi-exon	FALSE	canonical	0	0	junction_3	177.485097965998	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985230	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983450_46983518_46983631_46983774_46985122
ES.15305.18	chr17	-	1553	6	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-19	200	intron_retention	FALSE	canonical	2	13	junction_5	168.211771288457	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985232	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985103
ES.15305.19	chr17	-	2990	4	ISM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	-48	-200	-16	200	intron_retention	FALSE	canonical	3	390	junction_2	17.4419672692682	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985229	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261
ES.15305.20	chr17	-	2437	7	NNC	ENSMUSG00000023971.10	novel	1195	7	NA	NA	-1	200	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	158.783920260628	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985182	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46984081
ES.15305.21	chr17	-	1524	6	NIC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-13	200	intron_retention	FALSE	canonical	3	390	junction_2	29.3162071216588	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985226	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983518_46983631_46983774_46985122
ES.15305.23	chr17	-	1130	4	FSM	ENSMUSG00000023971.10	ENSMUST00000233247.2	406	4	-34	-690	-17	200	multi-exon	FALSE	canonical	3	56	junction_3	166.85522666871	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	46985230	46978183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46985122
ES.15305.25	chr17	-	1385	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	24	199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	159.153402588683	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	46985254	46978184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985204
ES.15305.26	chr17	-	4922	4	NNC	ENSMUSG00000023971.10	novel	537	6	NA	NA	-17	17	intron_retention	FALSE	non_canonical	0	0	junction_3	193.160267365959	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	46985230	46978366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46980949_46981036_46984003_46984038
ES.15305.27	chr17	-	1342	6	NIC	ENSMUSG00000023971.10	novel	1195	7	NA	NA	-31	0	intron_retention	FALSE	canonical	3	390	junction_2	29.3162071216588	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985244	46978383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983518_46983631_46983774_46985122
ES.15305.28	chr17	-	1244	7	FSM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	-49	0	-17	0	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985230	46978383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.29	chr17	-	2646	17	Fusion	ENSMUSG00000023971.10_ENSMUSG00000063576.13	novel	1195	7	NA	NA	-193	0	multi-exon	FALSE	non_canonical	0	0	junction_8	164.633197878648	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46991485	46978383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46987241_46987321_46987429_46987504_46987624_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991267
ES.15305.30	chr17	-	1332	6	NIC	ENSMUSG00000023971.10	novel	1195	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	413	junction_3	22.9032748750042	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985230	46978383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46979013_46980830_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.32	chr17	-	920	6	NIC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-3	-148	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	165.05514230099	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGGTGGTGTTTGGT	NA	False	NA	-14	True	GGGGCT	-44	NA	46985199	46978534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46985122
ES.15305.33	chr17	-	1106	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	35	148	-30	-148	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGGTGGTGTTTGGT	NA	False	NA	-14	True	GGGGCT	-44	NA	46985243	46978534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.34	chr17	-	4818	13	Fusion	ENSMUSG00000023971.10_ENSMUSG00000063576.13	novel	1195	7	NA	NA	-21	-167	intron_retention	FALSE	canonical	0	0	junction_11	162.327408344987	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCTCCTTGTTTTA	NA	False	NA	-33	True	GGGGCT	-25	NA	46991861	46978553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988211_46988353_46988426_46988610
ES.15305.35	chr17	-	2856	12	FSM	ENSMUSG00000023971.10_ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	-1	-755	-1	755	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTTGTCGGTCCACTTA	NA	False	NA	NA	False	AATAAA	-26	NA	46991831	46984720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.37	chr17	-	3723	9	Fusion	ENSMUSG00000023971.10_ENSMUSG00000063576.13	novel	1954	11	NA	NA	1802	745	intron_retention	FALSE	canonical	3	376	junction_7	31.8158765398661	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAAAAGTTCGTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	46989490	46984730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206
ES.15305.38	chr17	-	3332	5	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	2021	0	intron_retention	FALSE	canonical	3	400	junction_4	29.1236587674008	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46989271	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987957_46988030_46988245_46988353_46989035_46989206
ES.15305.39	chr17	-	4351	9	ISM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	-14	-3	-14	0	intron_retention	FALSE	canonical	3	376	junction_8	32.8062494046485	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991854	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857
ES.15305.4	chr17	-	2206	8	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	24	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.326382569461	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCATCAGCCTGCTTT	NA	False	NA	0	True	NA	NA	NA	46985254	46977246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978168_46978366_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.40	chr17	-	3200	4	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	2192	0	intron_retention	FALSE	canonical	3	376	junction_3	44.4622186680882	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46989100	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46988426_46988610_46988727_46988857
ES.15305.41	chr17	-	3296	10	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-25	0	intron_retention	FALSE	canonical	3	322	junction_9	44.226688774992	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991754	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.42	chr17	-	5523	4	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-27	0	intron_retention	FALSE	canonical	3	418	junction_2	26.2805377925694	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991319	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987732_46987869_46987957_46988030
ES.15305.43	chr17	-	3128	11	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	322	junction_10	42.0504458953767	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991695	46985475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.44	chr17	-	2145	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	-47	2	-37	1	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTCCTATTTCTGGCG	NA	False	NA	-2	True	TATAAA	-15	NA	46991877	46985477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.45	chr17	-	1954	12	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-34	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	123.384435842875	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTCCTATTTCTGGCG	NA	False	NA	-2	True	TATAAA	-15	NA	46991326	46985477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991267
ES.15305.46	chr17	-	1753	10	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_9	133.12214756696	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991852	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46991627
ES.15305.47	chr17	-	3126	10	ISM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	1026	3	488	0	intron_retention	FALSE	canonical	3	376	junction_8	32.5238753708073	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46990804	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206
ES.15305.48	chr17	-	2702	9	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	645	0	intron_retention	FALSE	canonical	3	376	junction_7	32.6321831172847	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46990647	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988426_46988610_46988727_46988857_46989420_46989967
ES.15305.49	chr17	-	1995	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-201	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	126.178084828187	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991493	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991392
ES.15305.5	chr17	-	2399	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	22	1	intron_retention	FALSE	non_canonical	0	0	junction_3	163.702643703624	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTGCATCAGCCTGCT	NA	False	NA	-2	True	NA	NA	NA	46985256	46977248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46979013_46980830_46980949_46981036_46981112_46983267_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.50	chr17	-	1923	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-202	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	126.737250161554	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991494	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991465
ES.15305.52	chr17	-	1912	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.937082546526	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991676	46985478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987653_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.53	chr17	-	3157	12	FSM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	-93	-1210	8	-1	multi-exon	FALSE	canonical	3	10	junction_1	123.030534407903	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991822	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46987148_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.54	chr17	-	2860	9	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	33	-1	intron_retention	FALSE	canonical	3	20	junction_8	138.152090103625	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991797	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46991627
ES.15305.56	chr17	-	2202	11	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	7	junction_7	131.886921262118	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991831	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988426_46988610_46988727_46988861_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.57	chr17	-	1899	13	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	122.780857176063	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991723	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988099_46988188_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.58	chr17	-	1874	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	79	1	-32	-1	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991761	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ES.15305.59	chr17	-	1892	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	127.352637251358	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991726	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989320_46989967_46990121_46991627
ES.15305.6	chr17	-	2268	7	NNC	ENSMUSG00000023971.10	novel	1289	7	NA	NA	-17	1	intron_retention	FALSE	non_canonical	0	0	junction_1	165.37978178188	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTGCATCAGCCTGCT	NA	False	NA	-2	True	NA	NA	NA	46985230	46977248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46978168_46978366_46979013_46980830_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15305.62	chr17	-	3954	6	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	1257	-1	intron_retention	FALSE	canonical	3	400	junction_5	26.8477187112797	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46990035	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987732_46987869_46987957_46988030_46988245_46988353_46989035_46989206
ES.15305.66	chr17	-	1911	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-203	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	125.339604790049	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991495	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991477
ES.15305.67	chr17	-	2086	12	NNC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-202	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	165.961311831383	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGTGTCCTATTTCTGG	NA	False	NA	-4	True	TATAAA	-13	NA	46991494	46985479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988211_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991267
ES.15305.68	chr17	-	3871	9	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	6	-2	intron_retention	FALSE	canonical	3	322	junction_8	46.3215662515852	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACGTGTCCTATTTCTG	NA	False	NA	-5	True	TATAAA	-12	NA	46991723	46985480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46990121_46991627
ES.15305.69	chr17	-	3478	9	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	8	-2	intron_retention	FALSE	canonical	3	322	junction_8	43.4216247968682	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACGTGTCCTATTTCTG	NA	False	NA	-5	True	TATAAA	-12	NA	46991822	46985480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46987321_46987429_46987732_46987869_46987957_46988030_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.70	chr17	-	4214	5	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	113	-3	intron_retention	FALSE	canonical	3	418	junction_3	24.3515913237718	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAACGTGTCCTATTTCT	NA	False	NA	-6	True	TATAAA	-11	NA	46991179	46985481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46986079_46987241_46987321_46987429_46987732_46987869_46987957_46988030
ES.15305.74	chr17	-	1883	11	NIC	ENSMUSG00000063576.13	novel	2100	12	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	132.551461704502	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAACGTGTCCTATTTCT	NA	False	NA	-6	True	TATAAA	-11	NA	46991832	46985481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989967_46990121_46991627
ES.15305.75	chr17	-	1683	12	FSM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	-85	256	16	-256	multi-exon	FALSE	canonical	3	10	junction_1	123.030534407903	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGTTGAAGAGTTTC	NA	False	NA	NA	False	ACTAAA	-17	NA	46991814	46986945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46987148_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.8	chr17	-	5833	19	Fusion	ENSMUSG00000023971.10_ENSMUSG00000063576.13	novel	2100	12	NA	NA	4	0	multi-exon	FALSE	non_canonical	0	0	junction_1	136.790109111066	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTGCATCAGCCTGC	NA	False	NA	-3	True	NA	NA	NA	46991826	46977249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_46978168_46978366_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46984003_46984038_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ES.15305.9	chr17	-	1539	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	5	-255	5	252	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	46985273	46978131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ES.15306.1	chr17	-	3497	16	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	49	851	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	159.504928520163	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATGAGCTTTGGTTGT	1158	False	NA	NA	False	NA	NA	NA	47015879	46993065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46993418_46993599_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998238_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.13	chr17	-	2872	14	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	38	-1	intron_retention	FALSE	canonical	0	0	junction_7	128.302158154032	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1147	False	NA	NA	False	AATAAA	-14	NA	47015890	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997267_46997542_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.14	chr17	-	2665	14	NNC	ENSMUSG00000059409.10	novel	3038	15	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	155.488883523576	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1123	False	NA	NA	False	AATAAA	-14	NA	47015914	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998238_46998762_46998956_47010994_47011076_47015758
ES.15306.15	chr17	-	3321	13	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	76	-1	intron_retention	FALSE	canonical	0	0	junction_3	132.39930660275	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1185	False	NA	NA	False	AATAAA	-14	NA	47015852	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995486_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.17	chr17	-	4030	11	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	55	-1	intron_retention	FALSE	canonical	3	369	junction_5	41.6970022903326	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1164	False	NA	NA	False	AATAAA	-14	NA	47015873	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995304_46995431_46995505_46995590_46996356_46996444_46997034_46997188_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.18	chr17	-	2790	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	121.967480610737	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1151	False	NA	NA	False	AATAAA	-14	NA	47015886	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998464_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.19	chr17	-	3453	12	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	52	-1	intron_retention	FALSE	canonical	3	369	junction_6	40.2184119671205	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1161	False	NA	NA	False	AATAAA	-14	NA	47015876	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46997034_46997188_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.2	chr17	-	3541	16	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	23	820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.658662684971	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTAGTTTTTGGTAATT	1132	False	NA	NA	False	NA	NA	NA	47015905	46993096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46993418_46993599_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.20	chr17	-	3711	12	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	49	-1	intron_retention	FALSE	canonical	3	416	junction_7	29.3048948045225	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1158	False	NA	NA	False	AATAAA	-14	NA	47015879	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.21	chr17	-	2885	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	122.929484515576	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGAGTCGCCTTGGT	1142	False	NA	NA	False	AATAAA	-13	NA	47015895	46993918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998950_47010994_47011073_47015758
ES.15306.22	chr17	-	2893	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.73812043578	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGAGTCGCCTTGGT	1134	False	NA	NA	False	AATAAA	-13	NA	47015903	46993918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995499_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.23	chr17	-	3021	17	NNC	ENSMUSG00000059409.10	novel	3038	15	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	192.375893435222	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGAGTCGCCTTGGT	1131	False	NA	NA	False	AATAAA	-13	NA	47015906	46993918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47000108_47000162_47000328_47000392_47010994_47011076_47015758
ES.15306.24	chr17	-	2816	16	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	117.518149898454	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCTGAGTCGCCTTGG	1132	False	NA	NA	False	AATAAA	-12	NA	47015905	46993919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46994891_46994974_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.25	chr17	-	3398	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	60	-3	intron_retention	FALSE	canonical	3	369	junction_8	37.8711612189408	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCTGAGTCGCCTTGG	1169	False	NA	NA	False	AATAAA	-12	NA	47015868	46993919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.26	chr17	-	2222	10	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	151.471384250998	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCTGAGTCGCCTTGG	1088	False	NA	NA	False	AATAAA	-12	NA	47015949	46993919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996252_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.27	chr17	-	4466	9	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	35	-4	intron_retention	FALSE	canonical	3	445	junction_3	27.6269795670826	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTCTGAGTCGCCTTG	1144	False	NA	NA	False	AATAAA	-11	NA	47015893	46993920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46996356_46996444_46997034_46997188_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.28	chr17	-	2885	16	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	90	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	158.591494797868	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTCTGAGTCGCCTTG	1199	False	NA	NA	False	AATAAA	-11	NA	47015838	46993920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47000108_47000162_47010994_47011073_47015758
ES.15306.30	chr17	-	4175	10	NIC	ENSMUSG00000059409.10	novel	3038	15	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	79	junction_9	117.908732228798	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGGTCTGAGTCGCCTT	1104	False	NA	NA	False	AATAAA	-10	NA	47015933	46993921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995505_46995590_46996356_46996444_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998572_46998762_46998956_47010994_47011076_47015758
ES.15306.31	chr17	-	4439	10	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	416	junction_5	31.7167245673943	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGGTCTGAGTCGCCTT	1095	False	NA	NA	False	AATAAA	-10	NA	47015942	46993921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995304_46995431_46995505_46995590_46996356_46996444_46997034_46997188_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.32	chr17	-	3242	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	23	-5	intron_retention	FALSE	canonical	3	416	junction_9	28.6719870297942	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGGTCTGAGTCGCCTT	1132	False	NA	NA	False	AATAAA	-10	NA	47015905	46993921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.33	chr17	-	3366	13	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	46	-5	intron_retention	FALSE	canonical	3	369	junction_7	38.6853403184663	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGGTCTGAGTCGCCTT	1155	False	NA	NA	False	AATAAA	-10	NA	47015882	46993921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.35	chr17	-	2252	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	-6	680	-6	-680	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTCTACCCCCTT	1103	False	NA	-2	True	AATACA	-13	NA	47015934	46994596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.37	chr17	-	3227	12	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	45	-680	intron_retention	FALSE	canonical	3	369	junction_6	39.7699999064871	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTCTACCCCCTT	1154	False	NA	-2	True	AATACA	-13	NA	47015883	46994596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46996356_46996444_46997034_46997188_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.38	chr17	-	2207	15	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	43	-682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	122.929484515576	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCCCTCTCTACCCCC	1152	False	NA	-4	True	AATACA	-11	NA	47015885	46994598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998962_47010994_47011073_47015758
ES.15306.4	chr17	-	3577	13	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	61	4	intron_retention	FALSE	canonical	3	416	junction_8	29.2074714566134	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGCCTTGGTGTGAAA	1170	False	NA	NA	False	AATAAA	-19	NA	47015867	46993912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46997358_46997484_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.5	chr17	-	3025	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	-95	-4	14	4	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCGCCTTGGTGTGAAA	1014	False	NA	NA	False	AATAAA	-19	NA	47016023	46993912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.6	chr17	-	3082	14	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	-21	1	intron_retention	FALSE	canonical	3	369	junction_8	38.3709702893574	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTCGCCTTGGTGTG	1088	False	NA	NA	False	AATAAA	-16	NA	47015949	46993915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.7	chr17	-	3201	13	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	74	0	intron_retention	FALSE	canonical	0	0	junction_9	132.012204822972	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1183	False	NA	NA	False	AATAAA	-15	NA	47015854	46993916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46997616_46997959_46998053_46998175_46998238_46998464_46998572_46998762_46998956_47010994_47011073_47015758
ES.15306.8	chr17	-	2946	16	NNC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	158.922566749415	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1166	False	NA	NA	False	AATAAA	-14	NA	47015871	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47000328_47000407_47010994_47011073_47015758
ES.15306.9	chr17	-	3852	11	NIC	ENSMUSG00000059409.10	novel	2926	15	NA	NA	42	-1	intron_retention	FALSE	canonical	3	416	junction_6	30.4139770500341	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGAGTCGCCTTGGTG	1151	False	NA	NA	False	AATAAA	-14	NA	47015886	46993917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46997034_46997188_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ES.15307.1	chr17	+	3768	17	NNC	ENSMUSG00000002763.17	novel	551	4	NA	NA	-6254	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.9630195238877	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47016134	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47017626_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.10	chr17	+	4892	15	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	80	junction_4	12.1998661752446	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022402	47036467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.11	chr17	+	3497	17	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_4	32.0862485147454	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTCTTGTGAGAGGT	NA	False	NA	8	True	AATAAA	-15	NA	47022402	47036464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47026287_47026419_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.12	chr17	+	3307	14	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_5	27.8253215742435	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTTGTGAGAGGTT	NA	False	NA	9	True	AATAAA	-16	NA	47022406	47036465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035891_47036113
ES.15307.13	chr17	+	3175	17	NNC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.1209573862144	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022406	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033619_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.14	chr17	+	3421	15	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	74	junction_1	13.0054933448469	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022406	47036467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035891_47036113
ES.15307.15	chr17	+	3504	16	NNC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_2	25.4999782134983	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022408	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47023311_47024833_47025140_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.18	chr17	+	1405	1	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	14	-4562	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTTGAAGTGTTTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	47022415	47023820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47022400_47023800
ES.15307.19	chr17	+	3956	13	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	15	-1	intron_retention	FALSE	canonical	3	74	junction_1	8.97643519939229	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022416	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47035891_47036113
ES.15307.2	chr17	+	185	1	Intergenic	novelGene_12758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGGTTTATTGG	NA	False	NA	NA	False	NA	NA	NA	47019237	47019422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47019200_47019400
ES.15307.20	chr17	+	3957	14	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	28	-3	intron_retention	FALSE	canonical	3	74	junction_1	12.9696961318097	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTCTTGTGAGAGGT	NA	False	NA	8	True	AATAAA	-15	NA	47022429	47036464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.21	chr17	+	2629	17	NNC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	444	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9630195238877	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTCTTGTGAGAGGT	NA	False	NA	8	True	AATAAA	-15	NA	47022845	47036464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47023311_47024944_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.22	chr17	+	2946	15	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	599	-7	intron_retention	FALSE	canonical	3	74	junction_1	12.6797283174397	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTACTGGTCTTGTGAG	NA	False	NA	4	True	AATAAA	-11	NA	47023000	47036460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.23	chr17	+	2330	13	ISM	ENSMUSG00000002763.17	ENSMUST00000144964.8	3383	16	8745	3	-3	-3	3prime_fragment	FALSE	canonical	3	80	junction_2	12.8636006709716	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTCTTGTGAGAGGT	NA	False	NA	8	True	AATAAA	-15	NA	47031133	47036464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.3	chr17	+	3398	16	FSM	ENSMUSG00000002763.17	ENSMUST00000144964.8	3383	16	-16	1	-16	-1	multi-exon	FALSE	canonical	3	74	junction_1	12.537942414926	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022372	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.4	chr17	+	3205	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	-4	-1	-4	1	multi-exon	FALSE	canonical	3	74	junction_1	12.2574913318346	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGAGAGGTTGCG	NA	False	NA	12	True	AATAAA	-19	NA	47022384	47036468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.5	chr17	+	3144	18	NNC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.3766579597614	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTTGTGAGAGGTT	NA	False	NA	9	True	AATAAA	-16	NA	47022384	47036465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47022566_47022623_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.6	chr17	+	2944	15	NIC	ENSMUSG00000002763.17	novel	3200	17	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.8066584783615	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022397	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.7	chr17	+	4724	12	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	74	junction_1	8.79519027087114	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	False	NA	10	True	AATAAA	-17	NA	47022402	47036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47035434_47035552_47035631_47035750_47035891_47036113
ES.15307.9	chr17	+	3487	15	NIC	ENSMUSG00000002763.17	novel	3383	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	74	junction_1	12.9307417278613	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTTGTGAGAGGTT	NA	False	NA	9	True	AATAAA	-16	NA	47022402	47036465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035891_47036113
ES.15308.1	chr17	-	208	1	Intergenic	novelGene_12759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGGATGTCTTAGTT	NA	False	NA	NA	False	AAAAAG	-7	NA	47021926	47021718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47021700_47021900
ES.15309.1	chr17	-	1072	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	-42	5	-42	-5	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGCCTGTGCCTGGTGT	2937	False	NA	NA	False	AGTAAA	-18	NA	47040136	47036594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
ES.1531.1	chr1	+	1243	11	NNC	ENSMUSG00000018189.13	novel	882	7	NA	NA	-150	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	411.903447424272	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAACTCCATTCTTC	NA	False	NA	20	True	NA	NA	NA	143652859	143682674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143652981_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ES.1531.10	chr1	+	1505	12	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	502.668745565701	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAACTCCATTCTTC	NA	False	NA	20	True	NA	NA	NA	143653011	143682674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143667522_143667703_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ES.1531.11	chr1	+	1421	12	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	499.51755236825	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAACTCCATTCTTC	NA	False	NA	20	True	NA	NA	NA	143653013	143682674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143681241_143681340_143682421
ES.1531.12	chr1	+	3635	10	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	1	-7	intron_retention	FALSE	canonical	3	615	junction_7	228.682269200989	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAGTTTCTTGGATTA	NA	False	NA	NA	False	AATAAA	-17	NA	143653014	143683036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ES.1531.13	chr1	+	2783	1	FSM	ENSMUSG00000100455.2	ENSMUST00000190224.2	3666	1	-365	1248	-365	-1248	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGTAGTCTTGGGAA	NA	False	NA	NA	False	GATAAA	-15	NA	143653014	143655797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653000_143655800
ES.1531.14	chr1	+	2006	12	NIC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	458.199927492049	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACCTAATTCTTTTAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	143653014	143683211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.17	chr1	+	1334	12	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	5	-134	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	455.061706831934	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATTGACTCAGTGCAC	NA	False	NA	11	True	AATAAA	-18	NA	143653023	143682545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.18	chr1	+	8164	1	FSM	ENSMUSG00000100455.2	ENSMUST00000190224.2	3666	1	-356	-4142	-356	4142	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTCCTAGAGTTAATA	NA	False	NA	NA	False	NA	NA	NA	143653023	143661187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653000_143661200
ES.1531.20	chr1	+	1813	12	NIC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	458.199927492049	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTTTCTTGGATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	143653033	143683037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.21	chr1	+	2907	2	FSM	ENSMUSG00000018189.13	ENSMUST00000185742.2	478	2	20	-2449	-9	362	multi-exon	FALSE	canonical	3	1337	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTCTAAATCTCAAA	NA	False	NA	NA	False	NA	NA	NA	143653033	143662429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653215_143659703
ES.1531.22	chr1	+	1450	12	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	-8	-7	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	455.061706831934	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTAAACTCCATTCT	NA	False	NA	18	True	NA	NA	NA	143653034	143682672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.23	chr1	+	2137	11	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	158	junction_10	378.282116944484	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCTGGCTAAACTC	NA	False	NA	12	True	NA	NA	NA	143653035	143682666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143678816_143682421
ES.1531.24	chr1	+	1258	11	NNC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	421.208689369059	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTAAACTCCATTCT	NA	False	NA	18	True	NA	NA	NA	143653037	143682672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661938_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ES.1531.25	chr1	+	1390	12	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	-5	-13	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	532.350409671756	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCTGGCTAAACTC	NA	False	NA	12	True	NA	NA	NA	143653037	143682666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674179_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.27	chr1	+	2862	11	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	1	-13	intron_retention	FALSE	canonical	3	124	junction_9	459.740241875779	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCTGGCTAAACTC	NA	False	NA	12	True	NA	NA	NA	143653043	143682666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.28	chr1	+	3386	11	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	1	-13	intron_retention	FALSE	canonical	3	124	junction_9	472.754280784426	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCTGGCTAAACTC	NA	False	NA	12	True	NA	NA	NA	143653043	143682666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
ES.1531.3	chr1	+	1228	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	-31	499	-31	-135	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAATTGACTCAGTGCA	NA	False	NA	10	True	AATAAA	-17	NA	143652978	143682544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ES.1531.31	chr1	+	1549	13	NNC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	563.270429180237	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCATTCTTCAATTCT	NA	False	NA	26	True	NA	NA	NA	143653044	143682680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677004_143677106_143677872_143677972_143678665_143678816_143682421
ES.1531.32	chr1	+	4000	1	FSM	ENSMUSG00000100455.2	ENSMUST00000190224.2	3666	1	-334	0	-334	0	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGACTATTGTAAATCA	NA	False	NA	NA	False	AATAAA	-21	NA	143653045	143657045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653000_143657000
ES.1531.33	chr1	+	1005	1	FSM	ENSMUSG00000100455.2	ENSMUST00000190224.2	3666	1	-317	2978	-317	-2978	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTGTGTACTGTACAT	NA	False	NA	NA	False	AATATA	-15	NA	143653062	143654067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653100_143654100
ES.1531.34	chr1	+	128	1	FSM	ENSMUSG00000088323.3	ENSMUST00000157698.3	135	1	3	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAGAAAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	143654668	143654796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143654700_143654800
ES.1531.35	chr1	+	2059	10	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	5751	524	-593	1	3prime_fragment	FALSE	canonical	3	576	junction_7	234.532842734206	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCATTCTTCAATTCT	NA	False	NA	26	True	NA	NA	NA	143658769	143682680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ES.1531.36	chr1	+	3436	1	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	-1004	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAATTTTTTAATGTTC	NA	False	NA	NA	False	NA	NA	NA	143669408	143672844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_143669400_143672800
ES.1531.5	chr1	+	1707	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	-29	167	-20	-6	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTTTCTTGGATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	143652989	143683037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ES.1531.6	chr1	+	1346	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	-21	520	-12	5	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCTTCAATTCTGGAT	NA	False	NA	30	True	NA	NA	NA	143652997	143682684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ES.1531.7	chr1	+	1672	2	FSM	ENSMUSG00000018189.13	ENSMUST00000185742.2	478	2	-13	-1181	-9	-906	multi-exon	FALSE	canonical	3	1337	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143653000	143661161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_143653215_143659703
ES.1531.8	chr1	+	1349	11	NNC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_9	417.62879450536	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGCTAAACTCCATTCT	NA	False	NA	18	True	NA	NA	NA	143653002	143682672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677852_143677972_143682421
ES.15310.1	chr17	+	227	1	Intergenic	novelGene_12760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	47051822	47052049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47051800_47052000
ES.15311.1	chr17	+	151	1	Intergenic	novelGene_12761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAACCCTCATCCTGC	NA	False	NA	NA	False	NA	NA	NA	47053302	47053453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47053300_47053500
ES.15312.1	chr17	-	2433	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	29	-554	-8	554	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACTCCACATGCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	47063111	47046076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.10	chr17	-	2362	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-19	-6	intron_retention	FALSE	canonical	2	7	junction_4	249.749154152722	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAATTTTGCTACTGC	NA	False	NA	-24	True	NA	NA	NA	47063159	47046687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
ES.15312.11	chr17	-	1830	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	211.469524991191	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAATTTTGCTACTGC	NA	False	NA	-24	True	NA	NA	NA	47063131	47046687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058358_47058471_47062898
ES.15312.12	chr17	-	1766	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.469524991191	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTAATTTTGCTACT	NA	False	NA	-26	True	NA	NA	NA	47063127	47046689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054201_47058408_47058471_47062898
ES.15312.13	chr17	-	2272	5	NIC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	416	junction_3	46.8268085609088	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTAATTTTGCTACT	NA	False	NA	-26	True	NA	NA	NA	47063129	47046689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47047835_47048100_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.14	chr17	-	1976	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	310	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	205.996504824718	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTAATTTTGCTACT	NA	False	NA	-26	True	NA	NA	NA	47062793	47046689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062424
ES.15312.15	chr17	-	1609	4	FSM	ENSMUSG00000023973.14	ENSMUST00000129200.2	1619	4	2	8	0	-8	multi-exon	FALSE	canonical	2	32	junction_3	233.055072175369	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTAATTTTGCTACT	NA	False	NA	-26	True	NA	NA	NA	47063121	47046689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47062898
ES.15312.16	chr17	-	1835	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.206051785245	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTGTAATTTTGCTAC	NA	False	NA	-27	True	NA	NA	NA	47063139	47046690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047823_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.17	chr17	-	1810	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	16	82	-1	-31	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTATTTCGATGCTGT	NA	False	NA	-49	True	NA	NA	NA	47063124	47046712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.18	chr17	-	1589	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	4	-283	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCCTGGGTCCTCA	NA	False	NA	0	True	AGTAAA	-18	NA	47063117	47046964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.19	chr17	-	1989	5	NIC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-1	-284	intron_retention	FALSE	canonical	3	416	junction_3	46.8268085609088	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTCCTGGGTCCTC	NA	False	NA	-1	True	AGTAAA	-17	NA	47063122	47046965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47047835_47048100_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.2	chr17	-	2020	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	-89	-23	-89	23	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGAGAATTGCTGGGTT	NA	False	NA	56	True	NA	NA	NA	47063229	47046607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.20	chr17	-	1563	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	10	335	-7	-284	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTCCTGGGTCCTC	NA	False	NA	-1	True	AGTAAA	-17	NA	47063130	47046965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.21	chr17	-	1613	7	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-1	-284	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	244.580593397487	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTCCTGGGTCCTC	NA	False	NA	-1	True	AGTAAA	-17	NA	47063122	47046965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
ES.15312.22	chr17	-	830	2	FSM	ENSMUSG00000023973.14	ENSMUST00000148656.2	531	2	-18	-281	0	49	multi-exon	FALSE	canonical	3	518	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGGACTACCAGAG	NA	False	NA	NA	False	NA	NA	NA	47063121	47057863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47058471_47062898
ES.15312.23	chr17	-	623	3	FSM	ENSMUSG00000023973.14	ENSMUST00000121671.2	561	3	-16	-46	3	46	multi-exon	FALSE	canonical	1	1	junction_1	258.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGGGACTACCA	NA	False	NA	NA	False	NA	NA	NA	47063137	47057866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47058127_47058346_47058471_47062898
ES.15312.4	chr17	-	1905	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063150	47046681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.5	chr17	-	2003	7	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	237.128422777382	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063130	47046681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47053832_47053989_47054111_47054209_47058346_47058471_47062898
ES.15312.6	chr17	-	2638	4	NNC	ENSMUSG00000023973.14	novel	1619	4	NA	NA	-1667	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	248.071674230565	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47050220	47046681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47049088_47049288
ES.15312.7	chr17	-	1894	7	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	244.580593397487	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063119	47046681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
ES.15312.8	chr17	-	1302	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.206051785245	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063069	47046681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047351_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ES.15312.9	chr17	-	7464	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	245.562700750745	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGCTACTGCTATGA	NA	False	NA	-19	True	NA	NA	NA	47063121	47046682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47047835_47048100_47049098_47049298_47054209_47054310_47054369_47058346_47058471_47062898
ES.15313.1	chr17	-	216	1	Genic_Genomic	ENSMUSG00000036858.9	novel	NA	NA	NA	NA	7845	11	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCATGTCACAAAGCT	NA	False	NA	NA	False	NA	NA	NA	47066793	47066577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_47066600_47066800
ES.15314.1	chr17	+	191	1	Intergenic	novelGene_12762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTATGTTCTTGGGGC	NA	False	NA	NA	False	NA	NA	NA	47072567	47072758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47072600_47072800
ES.15315.1	chr17	+	477	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	165	120	165	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTGTGTCCTAGTCCA	NA	False	NA	NA	False	NA	NA	NA	47083725	47084202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47083700_47084200
ES.15315.2	chr17	+	600	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	167	-5	167	5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCAGTCGTTTGGGT	NA	False	NA	15	True	GATAAA	-23	NA	47083727	47084327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47083700_47084300
ES.15316.1	chr17	+	3694	3	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCACCTTCACCCTGA	NA	False	NA	NA	False	NA	NA	NA	47085021	47091168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47086661_47088975_47089197_47089334
ES.15316.10	chr17	+	3017	4	Antisense	novelGene_ENSMUSG00000036568.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	47085028	47141512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47085775_47088098_47089446_47090210_47091051_47141428
ES.15316.11	chr17	+	376	1	Intergenic	novelGene_12763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGAGCCTTTGAATT	NA	False	NA	NA	False	AATAAA	-13	NA	47093654	47094030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47093700_47094000
ES.15316.12	chr17	+	270	1	Intergenic	novelGene_12764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	47094668	47094938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47094700_47094900
ES.15316.13	chr17	+	141	1	Intergenic	novelGene_12766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAATTTAAATTA	NA	False	NA	NA	False	NA	NA	NA	47102582	47102723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47102600_47102700
ES.15316.14	chr17	+	3470	13	Antisense	novelGene_ENSMUSG00000036568.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCACCCGACTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	47112049	47201373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47112759_47117480_47117581_47118321_47118417_47119274_47119421_47120493_47120551_47122847_47122953_47124860_47124967_47135377_47137050_47140837_47140906_47140989_47141040_47141876_47141923_47169361_47169618_47201313
ES.15316.15	chr17	+	2065	6	Antisense	novelGene_ENSMUSG00000036568.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCACCCGACTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	47135470	47201373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47137050_47140837_47140906_47140989_47141040_47141876_47141923_47169361_47169624_47201313
ES.15316.16	chr17	+	335	1	Intergenic	novelGene_12771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGCCCTGCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	47157832	47158167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47157800_47158200
ES.15316.2	chr17	+	2929	4	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCACCTTCACCCTGA	NA	False	NA	NA	False	NA	NA	NA	47085021	47091168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47086661_47088975_47089197_47089334_47089446_47090210
ES.15316.3	chr17	+	2914	5	Antisense	novelGene_ENSMUSG00000036568.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTATTTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	47085021	47141512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47086667_47088971_47089194_47089328_47089446_47090210_47091006_47141377
ES.15316.6	chr17	+	2602	5	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCACCTTCACCCTG	NA	False	NA	NA	False	NA	NA	NA	47085022	47091167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47085854_47086178_47086661_47088975_47089197_47089334_47089446_47090210
ES.15316.7	chr17	+	2964	1	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGGGCGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	47085022	47087986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47085000_47088000
ES.15316.8	chr17	+	3669	3	Antisense	novelGene_ENSMUSG00000063888.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCACCTTCACCCTGA	NA	False	NA	NA	False	NA	NA	NA	47085022	47091168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47085784_47088122_47089197_47089334
ES.15317.1	chr17	-	4605	5	ISM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	1	-42	1	42	intron_retention	FALSE	canonical	3	1943	junction_1	155.462817097851	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTCCTGCGGGGAG	NA	False	NA	NA	False	NA	NA	NA	47093581	47084790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316
ES.15317.10	chr17	-	2197	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	8	-592	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	820.557669447364	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCGTGTGAGTACAT	NA	False	NA	-4	True	AGTAAA	-15	NA	47093555	47085424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093334
ES.15317.11	chr17	-	1926	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	2	-592	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	845.011390455774	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCGTGTGAGTACAT	NA	False	NA	-4	True	AGTAAA	-15	NA	47093580	47085424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086577_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.13	chr17	-	2009	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-491	-592	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	824.973669613495	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCGTGTGAGTACAT	NA	False	NA	-4	True	AGTAAA	-15	NA	47094089	47085424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47094056
ES.15317.14	chr17	-	2971	6	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	-592	intron_retention	FALSE	canonical	3	1943	junction_1	137.277820495519	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCGTGTGAGTACAT	NA	False	NA	-4	True	AGTAAA	-15	NA	47093571	47085424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47091478_47092708_47092818_47093544
ES.15317.17	chr17	-	2065	8	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	-595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1014.76666665549	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGCGTGTGAGTA	NA	False	NA	-7	True	AGTAAA	-12	NA	47093571	47085427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47091587_47091653_47092708_47092818_47093544
ES.15317.2	chr17	-	5062	4	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	7	intron_retention	FALSE	canonical	3	1943	junction_1	135.545810214358	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGCCCAGTCCCCTG	NA	False	NA	NA	False	NA	NA	NA	47093571	47084825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47086663_47088977_47089198_47089335_47091478_47092708
ES.15317.22	chr17	-	1849	8	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-7	-595	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	784.960781549899	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGCGTGTGAGTA	NA	False	NA	-7	True	AGTAAA	-12	NA	47093570	47085427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47085857_47086006_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.23	chr17	-	2228	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	7	-595	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	826.81384778491	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGCGTGTGAGTA	NA	False	NA	-7	True	AGTAAA	-12	NA	47093556	47085427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093301
ES.15317.26	chr17	-	1908	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1047.52641175931	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTAAAAGATTGTTTT	NA	False	NA	-28	True	NA	NA	NA	47093581	47085448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091402_47091478_47092708_47092818_47093544
ES.15317.27	chr17	-	1681	8	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	-764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	784.960781549899	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGCTATTTAACAT	NA	False	NA	38	True	NA	NA	NA	47093571	47085596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47085857_47086006_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.28	chr17	-	1860	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-1	-768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACAGCATGGCTATTTA	NA	False	NA	34	True	NA	NA	NA	47093599	47085600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.29	chr17	-	2776	6	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	3	-816	intron_retention	FALSE	canonical	0	0	junction_1	901.399933436874	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATCATTGGGAAATGA	NA	False	NA	-14	True	ACTAAA	-20	NA	47093595	47085648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47091478_47092708_47092818_47093544
ES.15317.3	chr17	-	2629	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-16	-7	0	7	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGCCCAGTCCCCTG	NA	False	NA	NA	False	NA	NA	NA	47093598	47084825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.30	chr17	-	1690	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	5	-825	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	845.011390455774	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTGTTAACTGATCATT	NA	False	NA	-23	True	ACTAAA	-11	NA	47093577	47085657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086577_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.31	chr17	-	1681	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	11	914	-8	-914	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAAAC	NA	False	NA	-112	True	NA	NA	NA	47093571	47085746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.35	chr17	-	1449	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-35	1192	-19	-1192	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGTATACCTTTAGT	NA	False	NA	-1	True	NA	NA	NA	47093617	47086024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.36	chr17	-	1593	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	12	-1192	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	820.557669447364	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGTATACCTTTAGT	NA	False	NA	-1	True	NA	NA	NA	47093551	47086024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093334
ES.15317.39	chr17	-	2349	5	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	745	-1193	intron_retention	FALSE	canonical	0	0	junction_1	964.861227068432	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGTATACCTTTAG	NA	False	NA	-2	True	NA	NA	NA	47092818	47086025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47091478_47092708
ES.15317.42	chr17	-	3610	5	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1194	intron_retention	FALSE	canonical	3	1943	junction_1	150.254783617694	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093581	47086026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47092818_47093544
ES.15317.43	chr17	-	1428	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	847.611873966433	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTATACCTTTA	NA	False	NA	-3	True	NA	NA	NA	47093597	47086026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086655_47088968_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.44	chr17	-	3273	4	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-5	-1195	intron_retention	FALSE	canonical	0	0	junction_1	1051.67939770424	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTGTGTATACCTTT	NA	False	NA	-4	True	NA	NA	NA	47093568	47086027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47091478_47092708_47092818_47093544
ES.15317.46	chr17	-	1418	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-4	-1195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1064.5303215764	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTGTGTATACCTTT	NA	False	NA	-4	True	NA	NA	NA	47093586	47086027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092812_47093540
ES.15317.47	chr17	-	1321	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	-1195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1133.95144908805	826	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTGTGTATACCTTT	NA	False	NA	-4	True	NA	NA	NA	47093571	47086027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091402_47091480_47092708_47092818_47093544
ES.15317.48	chr17	-	1378	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	841.552335469003	826	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGGTGTGTATACCT	NA	False	NA	-6	True	NA	NA	NA	47093562	47086029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092719_47092818_47093544
ES.15317.49	chr17	-	1299	6	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1197	combination_of_known_junctions	FALSE	canonical	1	22	junction_5	885.090820198696	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGGTGTGTATACCT	NA	False	NA	-6	True	NA	NA	NA	47093581	47086029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47093544
ES.15317.50	chr17	-	1286	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-8	-1314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGGCTACAGCCTGCAT	NA	False	NA	NA	False	NA	NA	NA	47093571	47086146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.54	chr17	-	1143	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	1	-1467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGGTTTTACTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	47093581	47086299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088972_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.56	chr17	-	1117	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-1	-1480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATCAAGAGGGTCCCGG	NA	False	NA	NA	False	NA	NA	NA	47093564	47086312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088968_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.57	chr17	-	1038	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-15	1583	1	-1583	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTGGTGTTTAATGTT	NA	False	NA	-2	True	NA	NA	NA	47093597	47086415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.59	chr17	-	1019	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-9	-1586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	847.611873966433	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATCTTGGTGTTTAAT	NA	False	NA	-5	True	NA	NA	NA	47093572	47086418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088968_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.6	chr17	-	2443	8	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	-9	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	784.960781549899	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAAAAGAGCCGTTCG	NA	False	NA	NA	False	NA	NA	NA	47093572	47084837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47085782_47085929_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.60	chr17	-	914	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-1587	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_4	802.898845157692	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTATCTTGGTGTTTAA	NA	False	NA	-6	True	NA	NA	NA	47093563	47086419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091402_47091478_47092708_47092818_47093544
ES.15317.63	chr17	-	1311	6	FSM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	6	-7	6	7	multi-exon	FALSE	canonical	3	2131	junction_4	73.7276067697847	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTTTATCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	47093576	47088436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15317.9	chr17	-	2030	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-13	589	3	-589	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCGTGTGAGTACATGCC	NA	False	NA	-1	True	AGTAAA	-18	NA	47093595	47085421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ES.15318.1	chr17	-	159	1	Intergenic	novelGene_12765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47095197	47095038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47095000_47095200
ES.15319.1	chr17	-	6486	13	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31914	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	44.6968181815614	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGATTGTCTTGATTTT	NA	False	NA	2	True	AATACA	-25	NA	47201322	47109039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201263
ES.15319.11	chr17	-	4469	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-2453	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	49.7233160928081	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47125564	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47125415
ES.15319.13	chr17	-	3908	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.8463834792864	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123106	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47111516_47111863_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
ES.15319.14	chr17	-	6530	13	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-32015	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	44.4153376911875	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201423	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201314
ES.15319.15	chr17	-	6948	11	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	40	junction_10	37.8528730745765	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47169410	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47112756_47117477_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
ES.15319.16	chr17	-	4324	7	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.4266808531433	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123174	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
ES.15319.17	chr17	-	4885	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	6397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.7233160928081	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47135942	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124959_47135371
ES.15319.18	chr17	-	6653	14	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31914	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.0155149933077	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201322	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47175784_47175958_47201263
ES.15319.19	chr17	-	4271	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	49.1169239898247	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123173	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123116
ES.15319.2	chr17	-	5178	5	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	59	4	intron_retention	FALSE	canonical	3	125	junction_3	8.04285397107271	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGATTGTCTTGATT	NA	False	NA	0	True	AATACA	-23	NA	47123052	47109041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47112756_47117477_47117581_47118321_47119421_47120493_47120553_47122849
ES.15319.20	chr17	-	6400	12	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31903	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.5563172016623	281	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201311	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119411_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201263
ES.15319.21	chr17	-	4241	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	50.2250490846505	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123330	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123303
ES.15319.23	chr17	-	6435	12	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-31915	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	50.5681767109293	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201323	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47169361_47169625_47201263
ES.15319.24	chr17	-	4298	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	48.0092583663702	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123131	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123047
ES.15319.25	chr17	-	4398	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	50.2250490846505	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123310	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123126
ES.15319.26	chr17	-	4322	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-264	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.8198831621864	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTCACTGTGATTGTCT	NA	False	NA	-5	True	AATACA	-18	NA	47123375	47109046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117649_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.15319.27	chr17	-	6244	12	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-12390	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	45.9117010959152	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	False	NA	-8	True	AATACA	-15	NA	47155630	47109049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47155540
ES.15319.30	chr17	-	4375	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-271	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.7712749614125	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	False	NA	-8	True	AATACA	-15	NA	47123382	47109049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47113231_47113349_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.15319.32	chr17	-	6301	14	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31883	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	48.4472506410277	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	False	NA	-8	True	AATACA	-15	NA	47201291	47109049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169444_47169587_47169625_47201263
ES.15319.34	chr17	-	4902	6	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-262	-92	intron_retention	FALSE	canonical	3	17	junction_5	45.5517288365656	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTATATTGTTAATCCA	NA	False	NA	-96	True	GATAAA	-18	NA	47123373	47109137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.15319.36	chr17	-	4164	7	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-41	-138	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.4266808531433	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTTTATTTTGTTATG	NA	False	NA	NA	False	TATAAA	-34	NA	47123152	47109183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
ES.15319.37	chr17	-	6192	12	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-113	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1954433452483	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCAGTTTATTTTGTT	NA	False	NA	NA	False	TATAAA	-31	NA	47169521	47109186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117462_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361
ES.15319.38	chr17	-	6166	11	NIC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-174	-144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	49.5745902655786	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTGCAGTTTATTTT	NA	False	NA	NA	False	TATAAA	-28	NA	47169582	47109189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140990_47141040_47141876_47141923_47169361
ES.15319.39	chr17	-	6328	13	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31910	-148	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	44.6968181815614	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAACAAATTGCAGTTTA	NA	False	NA	NA	False	TATAAA	-24	NA	47201318	47109193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201263
ES.15319.4	chr17	-	6660	14	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31884	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	49.3705947027355	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGATTGTCTTGAT	NA	False	NA	-1	True	AATACA	-22	NA	47201292	47109042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47193658_47193866_47201263
ES.15319.40	chr17	-	4422	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-3423	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.7233160928081	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAACAAATTGCAGTTTA	NA	False	NA	NA	False	TATAAA	-24	NA	47126534	47109193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47126284
ES.15319.41	chr17	-	4304	6	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-9	-148	intron_retention	FALSE	canonical	0	0	junction_2	52.3320169685824	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAACAAATTGCAGTTTA	NA	False	NA	NA	False	TATAAA	-24	NA	47123120	47109193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117649_47118321_47118417_47119274_47119421_47120493_47120553_47122849
ES.15319.42	chr17	-	4122	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-293	-162	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTATAA	NA	False	NA	NA	False	TATAAA	-10	NA	47123404	47109207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.15319.43	chr17	-	6349	13	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31996	-162	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	44.4153376911875	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTATAA	NA	False	NA	NA	False	TATAAA	-10	NA	47201404	47109207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201314
ES.15319.44	chr17	-	4562	1	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	9342	-162	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTATAA	NA	False	NA	NA	False	TATAAA	-10	NA	47113769	47109207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47109200_47113800
ES.15319.46	chr17	-	2375	6	ISM	ENSMUSG00000036568.8	ENSMUST00000233537.2	3685	12	20132	-535	3	535	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTACTCTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	47123108	47111042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
ES.15319.48	chr17	-	1215	1	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	10301	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAATCAAACAGGAC	NA	False	NA	NA	False	NA	NA	NA	47112810	47111595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47111600_47112800
ES.15319.49	chr17	-	1735	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-294	-18	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	224	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAATCAAACAGGAC	NA	False	NA	NA	False	NA	NA	NA	47123405	47111595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.15319.5	chr17	-	6452	13	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31909	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.872104813274	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201317	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47201286
ES.15319.50	chr17	-	1391	7	NNC	ENSMUSG00000036568.8	novel	540	5	NA	NA	-31910	452	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.0381684296405	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAAGCCGGTCCAGATG	NA	False	NA	NA	False	AATAAA	-17	NA	47201318	47136268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47199607_47199736_47201263
ES.15319.51	chr17	-	177	1	Intergenic	novelGene_12767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	47139784	47139607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47139600_47139800
ES.15319.52	chr17	-	210	1	Intergenic	novelGene_12768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATTTATTTATTTCAT	NA	False	NA	NA	False	AATAAA	-22	NA	47146078	47145868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47145900_47146100
ES.15319.53	chr17	-	1554	1	Intergenic	novelGene_12769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47155890	47154336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47154300_47155900
ES.15319.54	chr17	-	3220	1	Intergenic	novelGene_12770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTATTGTGGCACACGC	NA	False	NA	NA	False	NA	NA	NA	47157690	47154470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47154500_47157700
ES.15319.55	chr17	-	4933	1	Intergenic	novelGene_12772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTGGCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	47167734	47162801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47162800_47167700
ES.15319.56	chr17	-	171	1	Intergenic	novelGene_12773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGGGGGGTG	NA	False	NA	NA	False	NA	NA	NA	47163558	47163387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47163400_47163600
ES.15319.57	chr17	-	4069	1	Intergenic	novelGene_12774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCTCTCATTTATGCT	NA	False	NA	NA	False	NA	NA	NA	47168727	47164658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47164700_47168700
ES.15319.58	chr17	-	1350	2	Intergenic	novelGene_12775	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTCAGTTAAGCTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	47168597	47167154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47168083_47168175
ES.15319.6	chr17	-	6559	14	NNC	ENSMUSG00000036568.8	novel	3685	12	NA	NA	-31944	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	49.0155149933077	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47201352	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876_47141923_47169361_47169625_47199607_47199708_47201314
ES.15319.7	chr17	-	4345	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-198	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	50.2250490846505	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123309	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123178
ES.15319.8	chr17	-	4457	8	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-3385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.7233160928081	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47126496	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47126359
ES.15319.9	chr17	-	4285	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	236	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123405	47109045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
ES.1532.1	chr1	-	169	1	Antisense	novelGene_ENSMUSG00000018189.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGTGTGCTGA	6866	False	NA	NA	False	NA	NA	NA	143659989	143659820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_143659800_143660000
ES.15320.1	chr17	+	1231	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-67	0	-67	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGGTTTGGCCTTCC	5240	False	NA	21	True	ATTAAA	-21	NA	47201542	47202773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47201500_47202800
ES.15320.2	chr17	+	1335	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	-17	-154	-17	154	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATTAGCGGACGGTT	5290	False	NA	18	True	AATAAA	-19	NA	47201592	47202927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47201600_47202900
ES.15321.1	chr17	-	191	1	Intergenic	novelGene_12776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGAGCCC	NA	False	NA	11	True	NA	NA	NA	47218577	47218386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47218400_47218600
ES.15322.1	chr17	+	1362	3	FSM	ENSMUSG00000023978.6	ENSMUST00000024773.6	2665	3	307	996	288	-996	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGAAAACTCTAAGG	NA	False	NA	NA	False	CATAAA	-10	NA	47221691	47234863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47222204_47230689_47230937_47234260
ES.15323.1	chr17	+	177	1	Intergenic	novelGene_12777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	47288441	47288618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47288400_47288600
ES.15324.1	chr17	+	4107	10	Antisense	novelGene_ENSMUSG00002076750.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAAGCGAGGGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	47289686	47321477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47292368_47293190_47293300_47294146_47294268_47296914_47296977_47297569_47297710_47299578_47299709_47301916_47302032_47303916_47303998_47311513_47311772_47321067
ES.15324.2	chr17	+	171	1	Intergenic	novelGene_12778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGCAGATGGGGCC	NA	False	NA	NA	False	NA	NA	NA	47305408	47305579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47305400_47305600
ES.15324.3	chr17	+	1484	1	Antisense	novelGene_ENSMUSG00000023977.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGGAAAAAAAAAAAAAAAA	6656	False	NA	NA	False	NA	NA	NA	47320679	47322163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47320700_47322200
ES.15325.1	chr17	-	7719	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-70	-1958	-46	4	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTCC	NA	False	NA	0	True	AATAAA	-21	NA	47321528	47239216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.11	chr17	-	8560	46	NNC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_29	23.6458019660422	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAGTTTTGCCTCCATC	NA	False	NA	-6	True	AATAAA	-15	NA	47321444	47239222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278235_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.15	chr17	-	3897	18	NNC	ENSMUSG00000023977.16	novel	6521	45	NA	NA	-3648	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.5651404382805	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTGAGTTTTGCCTCC	NA	False	NA	-9	True	AATAAA	-12	NA	47266729	47239225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254268_47254399_47255433_47255502_47255716_47255814_47255971_47256024_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707
ES.15325.18	chr17	-	6161	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	0	1472	0	476	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCCTAGTTTTTCAGA	NA	False	NA	3	True	ATTAAA	-20	NA	47321446	47240692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.19	chr17	-	5775	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-74	-10	-50	4	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGTTTTATTTTTCTA	NA	False	NA	-1	True	AATAAA	-20	NA	47321532	47241164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.20	chr17	-	6648	46	NIC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	11	3	intron_retention	FALSE	canonical	3	78	junction_42	17.1588655413657	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTTTTATTTTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	47321471	47241165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.21	chr17	-	5723	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-35	1945	1	3	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTTTTATTTTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	47321481	47241165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.22	chr17	-	5800	48	NNC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.1538005799969	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGTTTTATTTTTCT	NA	False	NA	-2	True	AATAAA	-19	NA	47321457	47241165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256228_47256330_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.26	chr17	-	5682	47	NNC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	23.5408585800159	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGTTTTATTTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47321489	47241166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47286969_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.27	chr17	-	7269	46	NNC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	-29	2	intron_retention	FALSE	non_canonical	0	0	junction_38	23.2583557267299	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCAGTTTTATTTTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47321511	47241166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293297_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.3	chr17	-	7680	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	-43	-4	-7	4	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTCC	NA	False	NA	0	True	AATAAA	-21	NA	47321489	47239216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.34	chr17	-	5781	48	NIC	ENSMUSG00000023977.16	novel	7633	47	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	25.9371388994046	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCTTCCCAGTTTTAT	NA	False	NA	-8	True	AATAAA	-13	NA	47321446	47241171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.35	chr17	-	5455	3	NNC	ENSMUSG00000023977.16	novel	6521	45	NA	NA	-3939	0	intron_retention	FALSE	non_canonical	0	0	junction_1	69.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTCTTCCCAGTTTT	NA	False	NA	-10	True	AATAAA	-11	NA	47247940	47241173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241563_47241686_47245172_47246359
ES.15325.37	chr17	-	5704	47	NNC	ENSMUSG00000023977.16	novel	7633	47	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	31.0504878823436	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTCTTCCCAGTTTT	NA	False	NA	-10	True	AATAAA	-11	NA	47321471	47241173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243479_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264980_47265788_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.39	chr17	-	5691	47	NNC	ENSMUSG00000023977.16	novel	5691	47	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	28.4385717459397	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTCTTCCCAGTTTT	NA	False	NA	-10	True	AATAAA	-11	NA	47321457	47241173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264981_47265788_47265890_47266707_47266908_47267483_47267661_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.43	chr17	-	5127	42	ISM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	-24	8981	0	1727	5prime_fragment	FALSE	canonical	3	75	junction_32	16.0448138029164	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTTTTGAACTTGA	NA	False	NA	NA	False	AATAAA	-24	NA	47321482	47250155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.44	chr17	-	176	1	Intergenic	novelGene_12779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47315138	47314962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47315000_47315100
ES.15325.5	chr17	-	7637	47	NNC	ENSMUSG00000023977.16	novel	7633	47	NA	NA	2	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	28.238862669012	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTCC	NA	False	NA	0	True	AATAAA	-21	NA	47321444	47239216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264981_47265788_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.7	chr17	-	7826	47	NNC	ENSMUSG00000023977.16	novel	7633	47	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	26.2128213624691	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGCCTCCATCTTCTC	NA	False	NA	-1	True	AATAAA	-20	NA	47321471	47239217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278235_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ES.15325.8	chr17	-	5136	6	NNC	ENSMUSG00000023977.16	novel	6521	45	NA	NA	1481	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	55.6366785493167	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTGCCTCCATCTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47250856	47239219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47241587_47241646_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227
ES.15325.9	chr17	-	6476	32	NIC	ENSMUSG00000023977.16	novel	7633	47	NA	NA	-20891	1	intron_retention	FALSE	canonical	3	87	junction_30	15.9412944871851	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTGCCTCCATCTTC	NA	False	NA	-3	True	AATAAA	-18	NA	47283972	47239219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789
ES.15326.1	chr17	+	200	1	Intergenic	novelGene_12780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTACTGTTTTCTTTTG	2872	False	NA	NA	False	NA	NA	NA	47328487	47328687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47328500_47328700
ES.15327.1	chr17	-	176	1	Intergenic	novelGene_12781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	47329550	47329374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47329400_47329600
ES.15328.1	chr17	-	304	1	Intergenic	novelGene_12782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	47344392	47344088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47344100_47344400
ES.15329.1	chr17	-	6033	1	Intergenic	novelGene_12783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	5521	False	NA	NA	False	NA	NA	NA	47395096	47389063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47389100_47395100
ES.1533.1	chr1	-	2219	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCAAACTTTTTCCTA	NA	False	NA	NA	False	AATACA	-45	NA	143681581	143679362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_143679400_143681600
ES.15330.1	chr17	-	3207	2	Intergenic	novelGene_12784	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACAAGCTTTTCTTATA	NA	False	NA	NA	False	TATAAA	-3	NA	47403171	47397515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47400653_47403101
ES.15330.2	chr17	-	3355	2	Intergenic	novelGene_12785	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACACAAGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47403168	47397519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47400808_47403101
ES.15330.3	chr17	-	2846	1	Intergenic	novelGene_12786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGTTTTTAATCTAC	NA	False	NA	-22	True	NA	NA	NA	47403170	47400324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47400300_47403200
ES.15331.1	chr17	+	178	1	Intergenic	novelGene_12787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTCCCC	2223	False	NA	NA	False	NA	NA	NA	47438960	47439138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47439000_47439100
ES.15332.1	chr17	+	4443	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-2766	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6347266685707	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGTCTCATCTGGGCT	NA	False	NA	19	True	AATAAA	-24	NA	47449034	47670387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47449070_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.10	chr17	+	4489	18	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-79	-7	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	18.3146281844959	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAAGAGGTGTCTCATC	NA	False	NA	13	True	AATAAA	-18	NA	47452062	47670381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452111_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.11	chr17	+	4520	18	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	195	2495	-79	0	3prime_fragment	FALSE	canonical	3	5	junction_1	15.1200501637732	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	NA	False	NA	20	True	AATAAA	-25	NA	47452062	47670388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47452111_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.12	chr17	+	4541	18	NNC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-78	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.739611565535	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAAGAGGTGTCTCAT	NA	False	NA	12	True	AATAAA	-17	NA	47452063	47670380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47452111_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630280_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.14	chr17	+	6983	18	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-40	-213	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.9504371486006	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	NA	False	NA	NA	False	NA	NA	NA	47452101	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.15	chr17	+	4674	18	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.9504371486006	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	NA	False	NA	20	True	AATAAA	-25	NA	47452128	47670388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.16	chr17	+	3554	14	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	-13	8073	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	18.1058688056415	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGACTTTATTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	47452128	47648535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476
ES.15332.17	chr17	+	6714	18	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	-5	-483	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	16.1326679683971	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGCCTGCTTCCTGC	NA	False	NA	NA	False	AATAAA	-22	NA	47452136	47672400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.19	chr17	+	6670	18	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	0	-486	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.9504371486006	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGTGCCTGCTTCC	NA	False	NA	NA	False	AATAAA	-19	NA	47452141	47672397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.2	chr17	+	7201	18	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-145	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	15.4644362628366	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTAGAGGTGCATTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	47451655	47672881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47451892_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.20	chr17	+	4479	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	321	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17.3857118283534	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTAAGAGGTGTCTCA	NA	False	NA	11	True	AATAAA	-16	NA	47452462	47670379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47452482_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.21	chr17	+	4485	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	334	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.7232623661908	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCTCATCTGGGC	NA	False	NA	18	True	AATAAA	-23	NA	47452475	47670386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47452515_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.22	chr17	+	4508	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	334	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	17.5349379366711	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	NA	False	NA	20	True	AATAAA	-25	NA	47452475	47670388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47452515_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.23	chr17	+	4522	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	351	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.7579965934771	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAAGAGGTGTCTCAT	NA	False	NA	12	True	AATAAA	-17	NA	47452492	47670380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47452515_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.24	chr17	+	160	1	Intergenic	novelGene_12788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATAAATTATTTT	3656	False	NA	NA	False	NA	NA	NA	47472013	47472173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47472000_47472200
ES.15332.25	chr17	+	156	1	Intergenic	novelGene_12789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	47484684	47484840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47484700_47484800
ES.15332.26	chr17	+	8011	16	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-17595	-485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3501076655058	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGTGCCTGCTTCCT	498	False	NA	NA	False	AATAAA	-20	NA	47505717	47672398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.27	chr17	+	4662	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16138	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	12.1088810383123	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	1955	False	NA	20	True	AATAAA	-25	NA	47507174	47670388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.29	chr17	+	6894	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16124	-213	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	1969	False	NA	NA	False	NA	NA	NA	47507188	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.3	chr17	+	4729	18	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-133	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	16.5988701829215	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTGTCTCATCTGGG	NA	False	NA	17	True	AATAAA	-22	NA	47451667	47670385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47451892_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.30	chr17	+	6820	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16121	-213	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17.6134714068522	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	1972	False	NA	NA	False	NA	NA	NA	47507191	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.31	chr17	+	6725	19	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16119	-487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5793110795194	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGGCTGTGCCTGCTTC	1974	False	NA	NA	False	AATAAA	-18	NA	47507193	47672396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47507920_47507985_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.32	chr17	+	3172	4	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16108	-2238	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	7.40870359029762	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTTTTTCTCT	1985	False	NA	NA	False	AATACA	-18	NA	47507204	47627478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718
ES.15332.35	chr17	+	6511	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16088	-489	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17.6134714068522	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATAGTGGCTGTGCCTGCT	2005	False	NA	NA	False	AATAAA	-16	NA	47507224	47672394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.36	chr17	+	6574	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16079	-488	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTGGCTGTGCCTGCTT	2014	False	NA	NA	False	AATAAA	-17	NA	47507233	47672395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.38	chr17	+	3446	13	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	8071	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.087120500916	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAAGACTTTATTTTT	2016	False	NA	NA	False	AATAAA	-14	NA	47507235	47648533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476
ES.15332.39	chr17	+	4519	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	-14	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.7444020496403	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTATCTTTAAGAGGTG	2016	False	NA	6	True	AATAAA	-11	NA	47507235	47670374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.4	chr17	+	6607	18	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	-33	-484	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	15.4644362628366	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGCCTGCTTCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	47451767	47672399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47451892_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.40	chr17	+	6542	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	-486	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.7444020496403	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGTGCCTGCTTCC	2016	False	NA	NA	False	AATAAA	-19	NA	47507235	47672397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.41	chr17	+	6613	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16077	-483	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	12.1088810383123	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGCCTGCTTCCTGC	2016	False	NA	NA	False	AATAAA	-22	NA	47507235	47672400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.42	chr17	+	4501	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16076	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	13.6679369328366	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTGTCTCATCTGGG	2017	False	NA	17	True	AATAAA	-22	NA	47507236	47670385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.43	chr17	+	6964	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16073	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	18.8907219290317	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGGTGCATTCCTTA	2020	False	NA	NA	False	AATAAA	-20	NA	47507239	47672883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.44	chr17	+	7435	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16073	365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1088732157453	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTCTCTCTCAGTCCT	2020	False	NA	NA	False	AATAAA	-11	NA	47507239	47673248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.45	chr17	+	6994	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16073	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	13.6679369328366	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTAGAGGTGCATTCCT	2020	False	NA	NA	False	AATAAA	-18	NA	47507239	47672881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.46	chr17	+	4476	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16058	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.4833580014156	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCTCATCTGGGC	2035	False	NA	18	True	AATAAA	-23	NA	47507254	47670386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507347_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.47	chr17	+	4528	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16046	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	13.4483967445938	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTGTCTCATCTGGG	2047	False	NA	17	True	AATAAA	-22	NA	47507266	47670385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.48	chr17	+	6792	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16046	-213	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	15.165235738359	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	2047	False	NA	NA	False	NA	NA	NA	47507266	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.49	chr17	+	3405	12	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16041	-391	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.3923048454133	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGGCTCTGTGTCATTT	2052	False	NA	NA	False	NA	NA	NA	47507271	47640071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943
ES.15332.5	chr17	+	4513	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	25	-14	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.0524035340561	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTATCTTTAAGAGGTG	NA	False	NA	6	True	AATAAA	-11	NA	47451892	47670374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47451972_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.50	chr17	+	6995	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16012	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGGTGCATTCCTTA	2081	False	NA	NA	False	AATAAA	-20	NA	47507300	47672883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.51	chr17	+	6531	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-15992	-487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.6789597698392	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGGCTGTGCCTGCTTC	2101	False	NA	NA	False	AATAAA	-18	NA	47507320	47672396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.52	chr17	+	4545	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-15990	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.3429728798375	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTTTAAGAGGTGTC	2103	False	NA	8	True	AATAAA	-13	NA	47507322	47670376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.53	chr17	+	4447	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-15985	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9671022595548	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTTTAAGAGGTGTC	2108	False	NA	8	True	AATAAA	-13	NA	47507327	47670376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.55	chr17	+	6983	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-15954	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2996763871967	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGGTGCATTCCTTA	2139	False	NA	NA	False	AATAAA	-20	NA	47507358	47672883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47507415_47508391_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.56	chr17	+	6705	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-14912	-213	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.8626920792153	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	104	False	NA	NA	False	NA	NA	NA	47508400	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47508438_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.57	chr17	+	4426	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	955	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0968531449531	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGAGGTGTCTCATCT	2336	False	NA	14	True	AATAAA	-19	NA	47524267	47670382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47524317_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.58	chr17	+	2793	13	NNC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	20935	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.7598704770098	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCTCATCTGGGC	NA	False	NA	18	True	AATAAA	-23	NA	47625929	47670386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47639991_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.59	chr17	+	4943	14	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	21283	-213	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	12.9340612658361	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	NA	False	NA	NA	False	NA	NA	NA	47626277	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.60	chr17	+	4639	13	NIC	ENSMUSG00000064043.16	novel	7044	19	NA	NA	22577	-240	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	15.2233373476383	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47627571	47672643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.61	chr17	+	4026	11	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	28312	-492	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.6182705963792	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACATAGTGGCTGTGCCT	2785	False	NA	NA	False	AATAAA	-13	NA	47633306	47672391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47633382_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.62	chr17	+	6887	10	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	28322	-2	intron_retention	FALSE	canonical	1	1	junction_1	19.2687298651801	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTGTCTCATCTGGGC	2795	False	NA	18	True	AATAAA	-23	NA	47633316	47670386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47633382_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47664871_47669834
ES.15332.63	chr17	+	3446	4	ISM	ENSMUSG00000064043.16	ENSMUST00000190020.4	4275	15	28879	29938	28879	-12	intron_retention	FALSE	canonical	3	53	junction_2	6.0184900284226	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	3352	False	NA	NA	False	NA	NA	NA	47633873	47640450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47634589_47635513_47635581_47637648_47637789_47637926
ES.15332.64	chr17	+	179	1	Intergenic	novelGene_12793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAACCA	6669	False	NA	NA	False	NA	NA	NA	47637190	47637369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47637200_47637400
ES.15332.65	chr17	+	4521	6	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	186817	485	33690	-485	3prime_fragment	FALSE	canonical	3	40	junction_4	9.13454979733539	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGTGCCTGCTTCCT	8163	False	NA	NA	False	AATAAA	-20	NA	47638684	47672398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.66	chr17	+	6314	5	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	193728	238	40601	-238	3prime_fragment	FALSE	canonical	3	40	junction_3	9.5655632348545	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47645595	47672645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.67	chr17	+	3023	3	NNC	ENSMUSG00000064043.16	novel	4275	15	NA	NA	59628	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.5	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGGTGCATTCCTTA	1633	False	NA	NA	False	AATAAA	-20	NA	47664622	47672883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47664871_47669834_47669943_47670216
ES.15332.68	chr17	+	3848	2	Genic_Genomic	ENSMUSG00000064043.16	novel	7044	19	NA	NA	61326	-213	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAGGACAGTATTTTC	3331	False	NA	NA	False	NA	NA	NA	47666320	47672670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_47666800_47669301
ES.15332.7	chr17	+	4538	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	68	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	17.7598357173112	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTGTCTCATCTGGG	NA	False	NA	17	True	AATAAA	-22	NA	47451935	47670385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47451972_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
ES.15332.8	chr17	+	6991	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	76	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	14.7826232975441	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTAGAGGTGCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	47451943	47672879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47451972_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15332.9	chr17	+	4434	18	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	77	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	17.0809187536013	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGAGGTGTCTCATCTG	NA	False	NA	15	True	AATAAA	-20	NA	47451944	47670383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47451972_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ES.15333.1	chr17	-	184	1	Intergenic	novelGene_12790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTTCCAGACCAGTGG	4585	False	NA	NA	False	NA	NA	NA	47504920	47504736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47504700_47504900
ES.15334.1	chr17	-	511	1	Intergenic	novelGene_12791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATCCTTCACGGAGC	NA	False	NA	NA	False	AATAAA	-14	NA	47537476	47536965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47537000_47537500
ES.15335.1	chr17	-	155	1	Intergenic	novelGene_12792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	47631923	47631768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47631800_47631900
ES.15336.1	chr17	-	155	1	Intergenic	novelGene_12794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAAATAAATCTA	1682	False	NA	NA	False	NA	NA	NA	47669013	47668858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47668900_47669000
ES.15337.1	chr17	+	1065	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	-44	-4	-44	2	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTTTTGTTTACTTG	7093	False	NA	9	True	NA	NA	NA	47679767	47689608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.10	chr17	+	1256	9	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	777.973127749282	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGGTTTTGTTTAC	7139	False	NA	6	True	NA	NA	NA	47679813	47689605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47680953_47681084_47681188_47681296_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.11	chr17	+	905	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	3	109	-1	-108	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTCTTATTTATTTA	7140	False	NA	NA	False	NA	NA	NA	47679814	47689495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.12	chr17	+	290	3	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	67	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	852	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCTGCGTGGTGT	7141	False	NA	NA	False	ATTAAA	-27	NA	47679815	47686058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47683351_47683417_47685897
ES.15337.13	chr17	+	2431	7	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	649.271493461882	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7141	False	NA	4	True	NA	NA	NA	47679815	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681296_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.14	chr17	+	3423	5	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1493	junction_4	134.420050587701	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7142	False	NA	5	True	NA	NA	NA	47679816	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47683351_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.15	chr17	+	1005	7	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	671.857231031183	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7143	False	NA	5	True	NA	NA	NA	47679817	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689132
ES.15337.16	chr17	+	878	5	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	699.748302963287	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7143	False	NA	7	True	NA	NA	NA	47679817	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.17	chr17	+	4485	6	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	977	junction_1	336.099033024494	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7143	False	NA	7	True	NA	NA	NA	47679817	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.18	chr17	+	1081	6	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	-15	intron_retention	FALSE	non_canonical	0	0	junction_5	715.357365237823	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTGTCCACCATGCC	7143	False	NA	-11	True	NA	NA	NA	47679817	47689588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689124
ES.15337.19	chr17	+	4754	6	NIC	ENSMUSG00000034729.17	novel	1113	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	79	junction_1	624.761586527213	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7146	False	NA	5	True	NA	NA	NA	47679820	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681296_47683351_47683417_47683497_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.2	chr17	+	1110	1	Genic_Genomic	ENSMUSG00000034729.17	novel	NA	NA	NA	NA	-18	-3355	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCGAAAAAAAAAAGGATCAA	7119	False	NA	NA	False	NA	NA	NA	47679793	47680903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_47679800_47680900
ES.15337.20	chr17	+	6938	4	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	702.866037496952	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7146	False	NA	7	True	NA	NA	NA	47679820	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47681424_47683171_47683766_47684513_47688775_47689126
ES.15337.21	chr17	+	4410	5	NIC	ENSMUSG00000034729.17	novel	1113	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	31	junction_1	689.94112067625	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7146	False	NA	5	True	NA	NA	NA	47679820	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47683417_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.22	chr17	+	4438	5	NNC	ENSMUSG00000034729.17	novel	684	6	NA	NA	-2	0	intron_retention	FALSE	non_canonical	1	4	junction_2	812.591033361801	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7146	False	NA	4	True	NA	NA	NA	47679820	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47681296_47683351_47683766_47684513_47686035_47686858_47686968_47688684
ES.15337.23	chr17	+	4481	8	NNC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	-2	0	intron_retention	FALSE	canonical	2	7	junction_7	737.010840891663	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTTTGTTTCCTGAA	7146	False	NA	NA	False	NA	NA	NA	47679820	47692342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126_47689322_47690002
ES.15337.27	chr17	+	1576	9	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	735.624224723466	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGACTTGAGTTTGT	7148	False	NA	NA	False	NA	NA	NA	47679822	47692334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126_47689843_47689920_47690087_47692168
ES.15337.28	chr17	+	4832	5	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	669.488424097086	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7148	False	NA	4	True	NA	NA	NA	47679822	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681296_47683351_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.29	chr17	+	1115	8	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	734.648576267759	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.30	chr17	+	6889	4	NIC	ENSMUSG00000034729.17	novel	1113	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1493	junction_3	139.68854243956	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7148	False	NA	5	True	NA	NA	NA	47679822	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.31	chr17	+	7726	2	ISM	ENSMUSG00000034729.17	ENSMUST00000143725.8	684	6	-1210	-880	0	0	intron_retention	FALSE	canonical	3	79	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7148	False	NA	5	True	NA	NA	NA	47679822	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47681296_47683351
ES.15337.32	chr17	+	3570	8	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	645.195145293425	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTTTGTTTCCTGAAA	7148	False	NA	NA	False	NA	NA	NA	47679822	47692343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126_47691991_47692168
ES.15337.33	chr17	+	3074	5	ISM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	12	0	1	0	intron_retention	FALSE	canonical	3	977	junction_2	379.353397243257	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7149	False	NA	5	True	NA	NA	NA	47679823	47689604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858
ES.15337.34	chr17	+	4826	6	NNC	ENSMUSG00000034729.17	novel	1113	7	NA	NA	1	0	intron_retention	FALSE	non_canonical	1	4	junction_3	653.159521097258	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7149	False	NA	4	True	NA	NA	NA	47679823	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47681296_47683351_47683417_47683497_47683766_47684513_47686968_47688684_47688775_47689126
ES.15337.35	chr17	+	6061	6	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	1	0	intron_retention	FALSE	non_canonical	1	4	junction_2	650.206920910567	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7149	False	NA	7	True	NA	NA	NA	47679823	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47683417_47683497_47683766_47684513_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.36	chr17	+	4305	9	NNC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	814.366126198776	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTGTTTCCTGA	7150	False	NA	NA	False	NA	NA	NA	47679824	47692341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689119_47689322_47690002_47691991_47692168
ES.15337.37	chr17	+	1216	9	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	778.740168477266	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7150	False	NA	4	True	NA	NA	NA	47679824	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47680953_47681084_47681212_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.39	chr17	+	1080	7	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	653.352486964137	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7151	False	NA	4	True	NA	NA	NA	47679825	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679958_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.4	chr17	+	6245	3	ISM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	-5	-3	-5	1	intron_retention	FALSE	canonical	3	977	junction_2	379	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGTTTTGTTTACTT	7132	False	NA	8	True	NA	NA	NA	47679806	47689607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47679880_47683351_47683417_47683500
ES.15337.40	chr17	+	9003	5	NNC	ENSMUSG00000034729.17	novel	3878	3	NA	NA	18	-1	intron_retention	FALSE	non_canonical	1	4	junction_1	747.772149454632	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTGTTTCCTGA	7166	False	NA	NA	False	NA	NA	NA	47679840	47692341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47683766_47684513_47686968_47688684_47688775_47689126_47689322_47690002
ES.15337.41	chr17	+	2552	7	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_3	617.46410152062	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGGCTGGTTTTGTT	7179	False	NA	3	True	NA	NA	NA	47679853	47689602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683417_47683500_47683766_47684513_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.42	chr17	+	2254	8	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	733.151876127578	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7213	False	NA	7	True	NA	NA	NA	47679887	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681084_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.43	chr17	+	2273	6	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	77	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	764.576327125029	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGGCTGGTTTTGTT	7225	False	NA	3	True	NA	NA	NA	47679899	47689602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681296_47683351_47683417_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.44	chr17	+	1830	7	NNC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	653.352486964137	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGGCTGGTTTTGTT	7406	False	NA	3	True	NA	NA	NA	47680080	47689602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47680790_47683177_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.45	chr17	+	4670	5	NNC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	258	-2	intron_retention	FALSE	non_canonical	1	4	junction_1	701.454337430456	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCCTGGCTGGTTTTGT	8616	False	NA	2	True	NA	NA	NA	47681290	47689601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47683766_47684513_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.46	chr17	+	8221	1	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	348	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCCTGGCTGGTTTTGT	8706	False	NA	2	True	NA	NA	NA	47681380	47689601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47681400_47689600
ES.15337.47	chr17	+	4729	4	NNC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	-579	0	intron_retention	FALSE	non_canonical	1	4	junction_1	705.722797326731	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	9383	False	NA	4	True	NA	NA	NA	47682057	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47683766_47684513_47686968_47688684_47688775_47689126
ES.15337.48	chr17	+	3313	6	NNC	ENSMUSG00000034729.17	novel	3878	3	NA	NA	-573	0	intron_retention	FALSE	non_canonical	0	0	junction_1	790.138367629366	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	9389	False	NA	4	True	NA	NA	NA	47682063	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47682595_47683180_47683766_47684513_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.49	chr17	+	2339	2	NNC	ENSMUSG00000034729.17	novel	405	5	NA	NA	-512	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	9450	False	NA	4	True	NA	NA	NA	47682124	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47683091_47688230
ES.15337.5	chr17	+	3342	6	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	977	junction_2	288.814404072927	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7138	False	NA	4	True	NA	NA	NA	47679812	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47679880_47683351_47683417_47683500_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.50	chr17	+	2648	3	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	-616	0	intron_retention	FALSE	canonical	3	1493	junction_2	152	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	NA	False	NA	4	True	NA	NA	NA	47685779	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47686035_47686858_47688775_47689126
ES.15337.7	chr17	+	1101	8	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	735.935528453965	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7138	False	NA	7	True	NA	NA	NA	47679812	47689606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47681212_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.8	chr17	+	3424	7	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	12	junction_1	702.294434138718	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTGGTTTTGTTT	7139	False	NA	4	True	NA	NA	NA	47679813	47689603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47681212_47681296_47683351_47683417_47683500_47686035_47686858_47686968_47688684_47688775_47689126
ES.15337.9	chr17	+	990	9	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	734.217600153388	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTTTGTTTCCTGAA	7139	False	NA	NA	False	NA	NA	NA	47679813	47692342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126_47689322_47690002_47690087_47692168
ES.15338.1	chr17	+	1684	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	-17	1	-17	-1	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTGTCCTGGAGGTGA	1113	False	NA	NA	False	ATTAAA	-14	NA	47696300	47703891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
ES.15338.2	chr17	+	4650	4	NNC	ENSMUSG00000023979.15	novel	1668	4	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.97775303139718	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTCCTGGAGGTG	1135	False	NA	NA	False	ATTAAA	-13	NA	47696322	47703890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47699611_47700034_47700185_47701905_47702027_47702799
ES.15338.3	chr17	+	2407	3	FSM	ENSMUSG00000023979.15	ENSMUST00000145462.2	1556	3	21	-872	21	-2	multi-exon	FALSE	canonical	3	24	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTCCTGGAGGTG	1162	False	NA	NA	False	ATTAAA	-13	NA	47696349	47703890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47696622_47700034_47700185_47701905
ES.15338.4	chr17	+	3903	3	ISM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	1175	3	1164	-3	3prime_fragment	FALSE	canonical	3	16	junction_2	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTATTGTCCTGGAGGT	2305	False	NA	NA	False	ATTAAA	-12	NA	47697492	47703889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47700185_47701905_47702027_47702799
ES.15339.1	chr17	-	552	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4840	2	4840	-2	3prime_fragment	FALSE	canonical	3	65	junction_1	4	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGAGTCTCAGCTTTT	6676	False	NA	-2	True	NA	NA	NA	47706669	47705484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_47705746_47706032_47706127_47706472
ES.1534.1	chr1	+	5833	5	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATACAGTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	147277127	147301102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_147277201_147288035_147288160_147289358_147289442_147294946_147295069_147295671
ES.15340.1	chr17	+	4649	5	FSM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	-278	495	-88	-1	multi-exon	FALSE	canonical	2	2	junction_3	3.20156211871642	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGTTTGTGTGTTGTG	9284	False	NA	32	True	AATATA	-22	NA	47747451	47781068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47747875_47757489_47757597_47774878_47774955_47776603_47779779_47780200
ES.15340.2	chr17	+	5108	1	Intergenic	novelGene_12795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGGACATTTGTATCC	64	False	NA	NA	False	NA	NA	NA	47769260	47774368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47769300_47774400
ES.15340.3	chr17	+	3768	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	29631	13	29631	-13	3prime_fragment	FALSE	canonical	3	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTCTGCAGCTGTAG	8164	False	NA	0	True	AATAAA	-18	NA	47777360	47781550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47779779_47780200
ES.15340.4	chr17	+	3943	2	ISM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	30047	-578	30047	578	3prime_fragment	FALSE	canonical	3	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGCTTGGAATCCT	8580	False	NA	NA	False	NA	NA	NA	47777776	47782141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47779779_47780200
ES.15341.1	chr17	-	1891	5	NNC	ENSMUSG00000047150.9	novel	1622	4	NA	NA	-52	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGGCTTATTATTTCT	5886	False	NA	NA	False	NA	NA	NA	47748353	47723673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47724820_47743394_47743626_47744260_47744349_47747531_47747720_47748115
ES.15342.1	chr17	+	171	1	Intergenic	novelGene_12796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	47785693	47785864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47785700_47785900
ES.15343.1	chr17	+	192	1	Antisense	novelGene_ENSMUSG00000023980.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCACAGAGGACACACTAA	8388	False	NA	NA	False	NA	NA	NA	47794122	47794314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_47794100_47794300
ES.15344.1	chr17	+	211	1	Intergenic	novelGene_12797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	47806640	47806851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47806600_47806900
ES.15345.1	chr17	+	172	1	Intergenic	novelGene_12799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	47813975	47814147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47814000_47814100
ES.15346.1	chr17	-	1263	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	47813212	47794288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.10	chr17	-	4324	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	-1535	4	-1530	-4	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGACATAGGGCCTCTC	NA	False	NA	-8	True	AATAAA	-27	NA	47814747	47799210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.11	chr17	-	2400	8	NIC	ENSMUSG00000023980.8	novel	2784	9	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	67.8948767265564	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGACATAGGGCCTC	NA	False	NA	-10	True	AATAAA	-25	NA	47813211	47799212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47800822_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.12	chr17	-	2957	9	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_2	87.8009111570034	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGACATAGGGCCTC	NA	False	NA	-10	True	AATAAA	-25	NA	47813212	47799212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47801208_47802991_47803162_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.13	chr17	-	5820	8	NIC	ENSMUSG00000023980.8	novel	2784	9	NA	NA	0	-6	intron_retention	FALSE	canonical	3	80	junction_1	44.4889346480948	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGACATAGGGCCTC	NA	False	NA	-10	True	AATAAA	-25	NA	47813212	47799212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47800822_47801067_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.14	chr17	-	3421	7	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-9	intron_retention	FALSE	canonical	3	89	junction_1	44.4050172340419	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACTCAGACATAGGGC	NA	False	NA	-13	True	AATAAA	-22	NA	47813212	47799215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47801208_47804486_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.16	chr17	-	1329	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	2	361	0	-361	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAATCGTGTTAGAA	NA	False	NA	15	True	AATAAA	-40	NA	47813212	47803949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.18	chr17	-	215	1	Intergenic	novelGene_12798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGTAGGGAGTAACT	3632	False	NA	NA	False	AAAAAG	-11	NA	47808292	47808077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47808100_47808300
ES.15346.19	chr17	-	1620	2	FSM	ENSMUSG00000023980.8	ENSMUST00000233675.2	337	2	-15	-1268	0	1268	multi-exon	FALSE	canonical	3	200	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAGATTTCATCATTC	NA	False	NA	NA	False	NA	NA	NA	47813212	47810802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47812366_47813155
ES.15346.2	chr17	-	1144	9	NNC	ENSMUSG00000023980.8	novel	1263	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.5700773484772	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	47813212	47794288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47794556_47794672_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812364_47813155
ES.15346.3	chr17	-	2779	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTATGATTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	47813212	47798974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.4	chr17	-	3339	8	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	71.6715866053669	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATGATTATTTT	NA	False	NA	NA	False	NA	NA	NA	47813212	47798976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47801524_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.5	chr17	-	2591	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	1	192	1	40	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTTTCCTGTGACT	NA	False	NA	36	True	AATGAA	-8	NA	47813216	47799166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.6	chr17	-	6116	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	-2	-4422	1	40	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTTTCCTGTGACT	NA	False	NA	36	True	AATGAA	-8	NA	47813216	47799166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.7	chr17	-	3035	8	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	5	junction_1	69.953920693612	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGGCCTCTCAAATGGT	NA	False	NA	-1	True	AATAAA	-34	NA	47813212	47799203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47801447_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15346.8	chr17	-	5667	7	NIC	ENSMUSG00000023980.8	novel	2784	9	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_6	76.176877506673	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACATAGGGCCTCTCAA	NA	False	NA	-6	True	AATAAA	-29	NA	47813212	47799208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47800822_47801067_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47813155
ES.15346.9	chr17	-	6705	6	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	-4	intron_retention	FALSE	canonical	3	187	junction_2	15.9072310601185	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGACATAGGGCCTCTC	NA	False	NA	-8	True	AATAAA	-27	NA	47813212	47799210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ES.15347.1	chr17	+	2185	7	FSM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	-187	1	-110	1	multi-exon	FALSE	canonical	2	40	junction_1	1813.81013951908	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTTGTGATCCCTGG	NA	False	NA	NA	False	AATAAA	-16	NA	47815865	47910615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47816192_47889633_47889699_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.10	chr17	+	329	1	Intergenic	novelGene_12800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAACCAA	NA	False	NA	NA	False	NA	NA	NA	47821074	47821403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47821100_47821400
ES.15347.11	chr17	+	175	1	Intergenic	novelGene_12801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAACAACAGCCG	NA	False	NA	NA	False	NA	NA	NA	47821077	47821252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47821100_47821300
ES.15347.12	chr17	+	159	1	Intergenic	novelGene_12803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47847970	47848129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47848000_47848100
ES.15347.13	chr17	+	212	1	Intergenic	novelGene_12804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCATAATAGGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	47881325	47881537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47881300_47881500
ES.15347.14	chr17	+	2037	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-58	-2	-24	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGTGATCCCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	47904336	47910616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.15	chr17	+	1749	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-55	283	-21	-277	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCCTGGCGGTTGCTCT	NA	False	NA	NA	False	AATACA	-43	NA	47904339	47910331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.16	chr17	+	1931	6	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1574.47598901984	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904375	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47904428_47904486_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.18	chr17	+	2342	1	NIC	ENSMUSG00000034165.17	novel	952	6	NA	NA	-14	-1668	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1918	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTTGGGTTCTGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	47904380	47906722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47904400_47906700
ES.15347.2	chr17	+	2192	7	FSM	ENSMUSG00000034165.17	ENSMUST00000182848.8	926	7	-209	-1057	-104	1	multi-exon	FALSE	canonical	3	40	junction_1	1799.11524552116	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGGCTCTTGTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	47815871	47910609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47816192_47889633_47889718_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.20	chr17	+	1357	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	-3	623	-3	-28	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTTTGAGTCCCTCT	NA	False	NA	NA	False	AATACA	-24	NA	47904391	47909991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.21	chr17	+	1139	2	FSM	ENSMUSG00000034165.17	ENSMUST00000182281.2	3858	2	32	2687	-2	1703	multi-exon	FALSE	canonical	3	3645	junction_1	0	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTCCCTTTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	47904392	47906412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47904778_47905658
ES.15347.22	chr17	+	1929	5	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	58	junction_3	1635.74637016256	2021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904394	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47904778_47905658_47905875_47908344_47908505_47908969_47909065_47909533
ES.15347.23	chr17	+	2851	4	NIC	ENSMUSG00000034165.17	novel	2113	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	3602	junction_1	261.865529529099	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904395	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.24	chr17	+	1974	6	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	13	29437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1574.47598901984	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCGGAAGTGGGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	47904407	47940053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533_47910606_47940034
ES.15347.26	chr17	+	1954	5	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1734.95639354423	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGGCTCTTGTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	47904418	47910609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47904784_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.27	chr17	+	1952	5	NNC	ENSMUSG00000034165.17	novel	2113	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1734.95639354423	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904419	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47904778_47905652_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.28	chr17	+	4421	4	NIC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	26	0	intron_retention	FALSE	canonical	3	3645	junction_1	241.595161835295	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904420	47910614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47904778_47905658_47908505_47908927_47909065_47909533
ES.15347.3	chr17	+	535	2	NNC	ENSMUSG00000034165.17	novel	283	2	NA	NA	-82	-23183	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTAAATGATCGTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47815893	47866628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47816192_47866391
ES.15347.30	chr17	+	1421	2	FSM	ENSMUSG00000034165.17	ENSMUST00000182281.2	3858	2	60	2377	26	-1668	multi-exon	FALSE	canonical	3	3645	junction_1	0	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTTGGGTTCTGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	47904420	47906722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47904778_47905658
ES.15347.32	chr17	+	2472	5	NIC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1687.74514885986	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGGCTCTTGTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	47904447	47910609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47905331_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.33	chr17	+	2335	4	NIC	ENSMUSG00000034165.17	novel	2113	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3602	junction_2	252.576501062329	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904453	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47904778_47905658_47905875_47908344_47909065_47909533
ES.15347.35	chr17	+	1780	5	NNC	ENSMUSG00000034165.17	novel	464	3	NA	NA	370	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1731.52207248421	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47904823	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47905016_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.36	chr17	+	1008	4	ISM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	1228	622	-58	-27	3prime_fragment	FALSE	canonical	3	3602	junction_1	261.865529529099	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGAGTCCCTCTT	NA	False	NA	NA	False	AATACA	-25	NA	47905622	47909992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.37	chr17	+	1441	4	NNC	ENSMUSG00000034165.17	novel	3858	2	NA	NA	-234	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1959.86433770866	2014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47906758	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47906828_47908344_47908505_47908927_47909065_47909533
ES.15347.38	chr17	+	1728	4	FSM	ENSMUSG00000034165.17	ENSMUST00000182539.8	931	4	-208	-589	-208	0	multi-exon	FALSE	canonical	3	145	junction_1	1891.51068373051	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47906784	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47907141_47908344_47908505_47908927_47909065_47909533
ES.15347.39	chr17	+	1966	4	FSM	ENSMUSG00000034165.17	ENSMUST00000183256.8	560	4	-435	-971	-179	0	multi-exon	FALSE	canonical	1	42	junction_1	1940.06534826937	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47906813	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47907408_47908344_47908505_47908927_47909065_47909533
ES.15347.4	chr17	+	2119	8	NNC	ENSMUSG00000034165.17	novel	2064	7	NA	NA	-7	29437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1927.71224247706	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCGGAAGTGGGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	47815968	47940053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47816192_47889633_47889718_47904569_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533_47910606_47940034
ES.15347.40	chr17	+	1681	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	-295	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	1892.45349275014	2014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47907793	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47908103_47908344_47908505_47908927_47909065_47909533
ES.15347.41	chr17	+	1505	4	NIC	ENSMUSG00000034165.17	novel	336	3	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_1	1894.33911078948	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47908028	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47908162_47908344_47908505_47908927_47909065_47909533
ES.15347.42	chr17	+	1449	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	1956.56450613484	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47908124	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47908202_47908344_47908505_47908927_47909065_47909533
ES.15347.43	chr17	+	5666	3	NNC	ENSMUSG00000092558.4	novel	2288	2	NA	NA	-276	4	intron_retention	TRUE	canonical	0	0	junction_1	97.5	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGGCCTTCTGGTCTG	NA	False	NA	12	True	AATAAA	-17	NA	47922230	47935177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922298_47923887_47924043_47929733
ES.15347.44	chr17	+	1901	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	-4	157	-4	13	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTCTGTATTTGGTC	NA	False	NA	21	True	AATAAA	-26	NA	47922502	47935186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ES.15347.45	chr17	+	7174	3	FSM	ENSMUSG00000092558.4	ENSMUST00000138638.2	5680	3	-29	-1465	-3	1295	multi-exon	FALSE	canonical	3	195	junction_2	38	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTATGTGTGTGTGTTT	NA	False	NA	NA	False	TTTAAA	-9	NA	47922503	47936638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47922618_47923887_47924043_47929733
ES.15347.46	chr17	+	3619	9	NNC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-10	2877	intron_retention	FALSE	canonical	1	1	junction_8	85.843971832622	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTGCAGGCTTTAT	NA	False	NA	12	True	AATAAA	-9	NA	47922503	47997663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47991750_47994544_47994658_47997350
ES.15347.47	chr17	+	1632	3	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	133.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTTTTGGCCTTCTGGTC	NA	False	NA	10	True	AATAAA	-15	NA	47922506	47935175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47933809
ES.15347.49	chr17	+	8250	8	NNC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-4	2878	intron_retention	FALSE	canonical	2	2	junction_3	82.8938342405636	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCAGGCTTTATT	NA	False	NA	13	True	AATAAA	-10	NA	47922509	47997664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922618_47923887_47924043_47960874_47960909_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.5	chr17	+	2114	7	FSM	ENSMUSG00000034165.17	ENSMUST00000183044.8	2064	7	-50	0	-10	0	multi-exon	FALSE	canonical	2	40	junction_1	1825.65854937031	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47815993	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47816192_47889633_47889718_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.50	chr17	+	1724	3	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	104.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCGTTTTGGCCTTCTG	NA	False	NA	7	True	AATAAA	-12	NA	47922510	47935172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47929733_47929988_47933809
ES.15347.51	chr17	+	6936	1	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	1	-1042	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTGTCTATGGGTTATC	NA	False	NA	NA	False	NA	NA	NA	47922510	47929446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922500_47929400
ES.15347.52	chr17	+	5465	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-3	205	intron_retention	FALSE	canonical	3	25	junction_7	81.5645481211297	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTTGTTCACTGCCT	NA	False	NA	3	True	NA	NA	NA	47922510	47994991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ES.15347.53	chr17	+	5703	3	FSM	ENSMUSG00000092558.4	ENSMUST00000138638.2	5680	3	-22	-1	1	1	multi-exon	FALSE	canonical	3	195	junction_2	38	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCGTTTTGGCCTTCTGGT	NA	False	NA	9	True	AATAAA	-14	NA	47922510	47935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47922618_47923887_47924043_47929733
ES.15347.54	chr17	+	5258	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	25	junction_7	81.5645481211297	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTGGTTTGCATGA	NA	False	NA	21	True	CATAAA	-16	NA	47922513	47994787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ES.15347.57	chr17	+	5406	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_2	76.6638567955951	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGGTTTGCATG	NA	False	NA	20	True	CATAAA	-15	NA	47922515	47994786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.58	chr17	+	4726	4	NNC	ENSMUSG00000092558.4	novel	5680	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.135397177602	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGTTTTGGCCTTCTGG	NA	False	NA	8	True	AATAAA	-13	NA	47922521	47935173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922618_47923887_47924043_47929733_47932845_47933809
ES.15347.59	chr17	+	5326	7	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	83.2366105348682	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGGTTTGCATG	NA	False	NA	20	True	CATAAA	-15	NA	47922521	47994786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.6	chr17	+	2317	8	NNC	ENSMUSG00000034165.17	novel	2064	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1929.36010328898	2045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47816006	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47816192_47889633_47889718_47896971_47897188_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.60	chr17	+	2608	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-1	-2792	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	76.6638567955951	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCAGTTGC	NA	False	NA	19	True	TATAAA	-16	NA	47922521	47991994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.61	chr17	+	5644	2	NNC	ENSMUSG00000092558.4	novel	405	2	NA	NA	-11	-1050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGCGTCTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	47922521	47929438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922615_47923887
ES.15347.63	chr17	+	5495	3	NNC	ENSMUSG00000023984.18	novel	599	3	NA	NA	-2	-31808	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	135.5	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47922535	47929406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922618_47923887_47925860_47925965
ES.15347.64	chr17	+	5288	9	NNC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	1	-13	intron_retention	FALSE	canonical	3	13	junction_7	78.599359889251	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGCCTTGTACTTGAT	NA	False	NA	7	True	CATAAA	-2	NA	47922538	47994773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47990725_47990795_47991606
ES.15347.66	chr17	+	1879	4	NNC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.713781621626	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTAGCGTTTTGGCCTTC	NA	False	NA	5	True	AATAAA	-10	NA	47922557	47935170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47922667_47923887_47924043_47929733_47929988_47933809
ES.15347.67	chr17	+	3081	1	Intergenic	novelGene_12806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATACC	NA	False	NA	NA	False	NA	NA	NA	47936956	47940037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_47937000_47940000
ES.15347.68	chr17	+	2383	7	Fusion	ENSMUSG00000090115.8_ENSMUSG00000023984.18	novel	1443	5	NA	NA	-1111	13	multi-exon	FALSE	canonical	3	9	junction_1	47.1018400206758	119	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCAGTTGC	NA	False	NA	19	True	TATAAA	-16	NA	47940503	47991994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_47940530_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.69	chr17	+	3486	7	FSM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	-901	5667	-901	15	multi-exon	FALSE	canonical	2	4	junction_1	48.3861780080037	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCAGTTGCTT	NA	False	NA	21	True	TATAAA	-18	NA	47940713	47991996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47941841_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.7	chr17	+	2044	7	FSM	ENSMUSG00000034165.17	ENSMUST00000182506.8	853	7	-156	-1035	6	1	multi-exon	FALSE	canonical	2	4	junction_2	1836.68414994704	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGGCTCTTGTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	47816009	47910609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47816192_47889633_47889699_47904569_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.70	chr17	+	5151	6	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	19259	2876	328	2806	3prime_fragment	FALSE	canonical	3	43	junction_1	37.8861452248708	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTGGTTTGCATGA	NA	False	NA	21	True	CATAAA	-16	NA	47960873	47994787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.71	chr17	+	5348	6	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	19267	2671	336	-2671	3prime_fragment	FALSE	canonical	3	43	junction_1	37.8861452248708	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTTGTTCACTGCCTT	NA	False	NA	4	True	NA	NA	NA	47960881	47994992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.72	chr17	+	2009	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	-571	5	-571	-5	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGCAGCTTCTATGAA	NA	False	NA	1	True	CATAAA	-9	NA	47983073	47991976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ES.15347.73	chr17	+	5009	6	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	-488	-2673	intron_retention	FALSE	canonical	3	13	junction_4	46.9143901164664	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGTTGTTCACTGCC	NA	False	NA	2	True	NA	NA	NA	47983156	47994990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47990725_47990795_47991606
ES.15347.74	chr17	+	1958	6	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	-435	11	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	46.9143901164664	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATCCTTTTGTCAGTT	NA	False	NA	17	True	TATAAA	-14	NA	47983209	47991992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47990725_47990795_47991606
ES.15347.75	chr17	+	1420	5	NIC	ENSMUSG00000090115.8	novel	1443	5	NA	NA	-110	2805	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	56.2199919957305	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGGTTTGCATG	NA	False	NA	20	True	CATAAA	-15	NA	47983534	47994786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47994544
ES.15347.76	chr17	+	1612	6	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	-8	2805	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	49.8678252984828	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGGTTTGCATG	NA	False	NA	20	True	CATAAA	-15	NA	47983636	47994786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606_47991750_47994544
ES.15347.77	chr17	+	5290	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	42028	1988	-2	-1988	3prime_fragment	FALSE	canonical	3	71	junction_4	30.9141957682874	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTGAGCTTCGCCTCT	NA	False	NA	NA	False	ACTAAA	-20	NA	47983642	47995675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.78	chr17	+	4254	5	NNC	ENSMUSG00000090115.8	novel	8252	7	NA	NA	554	-2673	intron_retention	FALSE	canonical	1	2	junction_1	44.4465971700872	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGTTGTTCACTGCC	NA	False	NA	2	True	NA	NA	NA	47984779	47994990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_47985130_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.79	chr17	+	975	4	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	43956	5672	1345	10	3prime_fragment	FALSE	canonical	3	71	junction_3	22.7596133534821	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATCCTTTTGTCAGT	NA	False	NA	16	True	TATAAA	-13	NA	47985570	47991991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47985846_47989768_47989878_47990588_47990795_47991606
ES.15347.8	chr17	+	1984	7	FSM	ENSMUSG00000034165.17	ENSMUST00000171031.8	2113	7	129	0	18	0	multi-exon	FALSE	canonical	3	29	junction_2	1830.80687281744	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47816104	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_47816192_47889633_47889699_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15347.80	chr17	+	6430	4	ISM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	1993	-5683	1412	1	3prime_fragment	FALSE	canonical	3	25	junction_3	41.1528316833187	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGCAGGCTTTATT	NA	False	NA	13	True	AATAAA	-10	NA	47985637	47997664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_47985846_47989768_47989878_47990588_47990644_47991606
ES.15347.9	chr17	+	1954	7	NIC	ENSMUSG00000034165.17	novel	2064	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_2	1835.27100632758	2045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47816117	47910608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_47816192_47889633_47889718_47904569_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ES.15348.1	chr17	+	4162	6	NIC	ENSMUSG00000023266.12	novel	344	4	NA	NA	-90	7	intron_retention	FALSE	canonical	1	1	junction_1	30.1024915912288	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTCGTCTGTGCAGT	NA	False	NA	NA	False	AATATA	-26	NA	47999864	48015218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48000024_48008115_48008259_48009497_48009587_48010433_48012710_48013494_48013650_48013878
ES.15348.10	chr17	+	4647	6	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_3	29.3025596151599	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	AATATA	-16	NA	48006130	48015208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48009846_48012710_48013494_48013650_48013878
ES.15348.11	chr17	+	7437	3	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-8	1	intron_retention	FALSE	canonical	3	46	junction_2	15.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48006141	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48009587_48010433_48012710_48013494
ES.15348.12	chr17	+	2124	9	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	32.988397581574	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGAGTGCTCTCGTCT	NA	False	NA	NA	False	AATATA	-19	NA	48006145	48015211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48011305_48011404_48012547_48012710_48013494_48013650_48013878_48014566_48014660
ES.15348.13	chr17	+	3733	7	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	28.1350907823901	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGTGAGTGCTCTCGT	NA	False	NA	NA	False	AATATA	-17	NA	48006148	48015209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48010930_48012710_48013494_48013650_48013878
ES.15348.14	chr17	+	4467	4	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-1601	1	intron_retention	FALSE	canonical	3	46	junction_2	15.9234278833282	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48008882	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48009587_48010433_48012710_48013494_48013650_48013878
ES.15348.15	chr17	+	1497	2	ISM	ENSMUSG00000023266.12	ENSMUST00000138316.2	1653	3	502	-8	502	6	3prime_fragment	FALSE	canonical	3	82	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTCTCGTCTGTGCAG	NA	False	NA	NA	False	AATATA	-25	NA	48013491	48015217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48013650_48013878
ES.15348.2	chr17	+	3458	7	NIC	ENSMUSG00000023266.12	novel	344	4	NA	NA	-3	1	intron_retention	FALSE	canonical	1	1	junction_1	33.5828163731923	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	47999951	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48000024_48008115_48008259_48009497_48009587_48010433_48010621_48011229_48012710_48013494_48013650_48013878
ES.15348.3	chr17	+	4672	7	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-132	1	intron_retention	FALSE	canonical	0	0	junction_2	33.1109246825475	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48005990	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48006198_48008115_48008259_48008418_48009587_48010433_48010621_48011229_48012710_48013494_48013650_48013878
ES.15348.4	chr17	+	2353	8	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-112	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	30.9970373831212	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48006010	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48011305_48011404_48012547_48012710_48013494_48013650_48013878
ES.15348.5	chr17	+	3439	7	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-56	-1	intron_retention	FALSE	canonical	3	4	junction_4	26.7794490027127	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	AATATA	-16	NA	48006066	48015208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48011305_48012710_48013494_48013650_48013878
ES.15348.6	chr17	+	2172	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	-23	-5	-23	5	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTCTCGTCTGTGCA	NA	False	NA	NA	False	AATATA	-24	NA	48006099	48015216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
ES.15348.7	chr17	+	4078	6	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-17	1	intron_retention	FALSE	canonical	3	46	junction_4	13.0322676461159	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGAGTGCTCTCGTC	NA	False	NA	NA	False	AATATA	-18	NA	48006105	48015210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
ES.15348.8	chr17	+	6556	5	NNC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	4	junction_2	31.0835567462927	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGTGAGTGCTCTCG	NA	False	NA	NA	False	AATATA	-16	NA	48006106	48015208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48009587_48010433_48010621_48011305_48012710_48013494_48013650_48013878
ES.15348.9	chr17	+	4916	5	NIC	ENSMUSG00000023266.12	novel	2144	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_3	13.2476412994918	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGTGAGTGCTCTCGT	NA	False	NA	NA	False	AATATA	-17	NA	48006122	48015209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48006198_48008115_48008259_48009497_48012710_48013494_48013650_48013878
ES.15349.1	chr17	-	5063	1	Intergenic	novelGene_12802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGGGGAGCAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	47843944	47838881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47838900_47843900
ES.1535.1	chr1	+	161	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	148344375	148344536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_148344400_148344500
ES.15350.1	chr17	-	666	1	Intergenic	novelGene_12805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGGCTTATATTATT	5617	False	NA	NA	False	NA	NA	NA	47882611	47881945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47881900_47882600
ES.15351.1	chr17	-	3864	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	6	-16	6	16	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACAGAAGCTAAGCAGC	2347	False	NA	10	True	AATAAA	-33	NA	47922411	47910239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.2	chr17	-	2876	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	23	955	23	-955	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAATTACTCCCTGAGC	2364	False	NA	92	True	NA	NA	NA	47922394	47911210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.4	chr17	-	2554	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	237	1063	237	-1063	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGTATATCTGAGAAGG	2578	False	NA	-16	True	NA	NA	NA	47922180	47911318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.5	chr17	-	2179	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	257	1418	257	-1418	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGGTTTTGGTTTTT	2598	False	NA	NA	False	NA	NA	NA	47922160	47911673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.6	chr17	-	2152	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-40	1742	-40	-1742	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGCTTCCTTTGTTCT	2301	False	NA	NA	False	NA	NA	NA	47922457	47911997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.7	chr17	-	1991	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	-40	1903	-40	-1903	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTTGGTCCCTGG	2301	False	NA	0	True	AAAACA	-20	NA	47922457	47912158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15351.8	chr17	-	1454	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	259	2141	259	-2141	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGGGCTACTATGGCT	2600	False	NA	NA	False	NA	NA	NA	47922158	47912396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ES.15352.1	chr17	-	3191	1	Antisense	novelGene_ENSMUSG00000023984.18_AS_novelGene_ENSMUSG00000092558.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTCTTCAAATCCTGC	7004	False	NA	NA	False	NA	NA	NA	47931247	47928056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_47928100_47931200
ES.15353.1	chr17	-	3104	2	Genic_Genomic	ENSMUSG00000083672.2	novel	1569	1	NA	NA	-7126	166	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTTCAGCTTC	NA	False	NA	NA	False	TATAAA	-20	NA	47940390	47931529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_47934499_47940255
ES.15354.1	chr17	-	185	1	Intergenic	novelGene_12807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47947211	47947026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47947000_47947200
ES.15355.1	chr17	-	4366	3	Antisense	novelGene_ENSMUSG00000090115.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47985708	47958025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_47960948_47982967_47984341_47985637
ES.15355.2	chr17	-	7270	4	Antisense	novelGene_ENSMUSG00000090115.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47976756	47968935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_47969145_47969195_47969759_47970030_47973877_47974104
ES.15355.3	chr17	-	5807	1	Intergenic	novelGene_12808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAGAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	47974990	47969183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47969200_47975000
ES.15355.4	chr17	-	5432	2	Antisense	novelGene_ENSMUSG00000090115.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGTGGAAGCATGAGA	NA	False	NA	NA	False	AATAAA	-37	NA	47981548	47973882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_47979030_47981263
ES.15355.5	chr17	-	124	1	Intergenic	novelGene_12809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	47979310	47979186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_47979200_47979300
ES.15355.6	chr17	-	421	2	Antisense	novelGene_ENSMUSG00000090115.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTTATTTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	47983545	47981862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_47981966_47983227
ES.15356.1	chr17	-	1789	5	NNC	ENSMUSG00000033475.16	novel	749	3	NA	NA	-37	3070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2074.22676858149	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTTCTACAGTTTCCA	NA	False	NA	NA	False	AATAAA	-28	NA	47999030	47994500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47995544_47997397_47997562_47997659_47997934_47998112_47998214_47998823
ES.15356.10	chr17	-	535	3	NNC	ENSMUSG00000033475.16	novel	749	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2243	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	47998994	47997668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47997932_47998112_47998214_47998823
ES.15356.11	chr17	-	1164	6	NIC	ENSMUSG00000096549.10	novel	686	4	NA	NA	-48	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	1.83303027798234	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTATAAGGCGTGGTT	NA	False	NA	NA	False	NA	NA	NA	48005709	48000504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48000800_48000982_48001187_48001498_48001637_48002281_48002390_48003259_48003405_48005435
ES.15356.12	chr17	-	1676	1	Genic_Genomic	ENSMUSG00000079444.10_ENSMUSG00000096549.10	novel	NA	NA	NA	NA	-208	-1053	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGTGGTTAAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	48005869	48004193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_48004200_48005900
ES.15356.2	chr17	-	707	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	-8	-105	-8	11	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGCATGAGCCCCAAACA	NA	False	NA	93	True	AATAAA	-27	NA	47999001	47997559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47997988_47998112_47998214_47998823
ES.15356.3	chr17	-	3612	7	NNC	ENSMUSG00000079444.10	novel	2721	9	NA	NA	-296	99	intron_retention	FALSE	canonical	0	0	junction_3	1951.72869243881	353	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACAGGCATGAGCCCC	NA	False	NA	88	True	AATAAA	-22	NA	48005676	47997564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47997934_47998112_47998214_47998823_47999765_48000206_48000412_48000982_48001615_48002281_48003405_48005435
ES.15356.4	chr17	-	698	2	FSM	ENSMUSG00000033475.16	ENSMUST00000143156.2	1037	2	346	-7	28	7	multi-exon	FALSE	canonical	3	4486	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	NA	False	NA	-5	True	AATAAA	-22	NA	47998965	47997657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47998214_47998823
ES.15356.5	chr17	-	2092	3	FSM	ENSMUSG00000096549.10_ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	-1438	95	-1235	-1	multi-exon	FALSE	canonical	3	3748	junction_1	369	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGTATTTTATTCTTT	NA	False	NA	-13	True	AATAAA	-14	NA	48000546	47997665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47997934_47998112_47998214_47998823
ES.15356.6	chr17	-	596	3	NNC	ENSMUSG00000033475.16	novel	749	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	107	junction_2	1820.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	47998994	47997668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_47997934_47998112_47998214_47998764
ES.15356.7	chr17	-	697	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	-107	4	8	-4	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	47999100	47997668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_47997988_47998112_47998214_47998823
ES.15356.8	chr17	-	1300	1	NIC	ENSMUSG00000033475.16	novel	749	3	NA	NA	25	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	47998968	47997668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_47997700_47999000
ES.15356.9	chr17	-	4969	4	Fusion	ENSMUSG00000096549.10_ENSMUSG00000033475.16	novel	594	3	NA	NA	-2	-4	intron_retention	TRUE	canonical	3	3	junction_2	104.894656150296	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGGTATTTTATTC	NA	False	NA	-16	True	AATAAA	-11	NA	48005663	47997668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_47997988_47998112_48002390_48003259_48003405_48005435
ES.15357.1	chr17	-	2281	2	NNC	ENSMUSG00000086930.2	novel	574	2	NA	NA	-1841	8	intron_retention	FALSE	canonical	1	2	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTTGTTTGTCTTTGC	NA	False	NA	0	True	AATAAA	-26	NA	48014762	48010887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48013119_48014712
ES.15357.2	chr17	-	1538	2	NIC	ENSMUSG00000086930.2	novel	978	3	NA	NA	-684	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTGGAAAGGGTTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	48013605	48010896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48011368_48012538
ES.15357.3	chr17	-	1442	5	NNC	ENSMUSG00000086930.2	novel	574	3	NA	NA	-1349	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGTGGAAAGGGTTGT	NA	False	NA	-10	True	AATAAA	-16	NA	48014270	48010897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48011368_48011669_48011758_48012538_48013119_48013488_48013688_48014165
ES.15357.4	chr17	-	3582	1	Genic_Genomic	ENSMUSG00000086930.2	novel	NA	NA	NA	NA	-1559	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACAGTGGAAAGGGTTG	NA	False	NA	-11	True	AATAAA	-15	NA	48014480	48010898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_48010900_48014500
ES.15357.5	chr17	-	1564	3	NNC	ENSMUSG00000086930.2	novel	978	3	NA	NA	-1866	-581	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATATTACTCTTATA	NA	False	NA	NA	False	ATTAAA	-18	NA	48014787	48011828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48013119_48013488_48013688_48014712
ES.15357.6	chr17	-	1597	3	NNC	ENSMUSG00000086930.2	novel	978	3	NA	NA	-1358	-583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATTATATTACTCTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	48014279	48011830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48013119_48013488_48013688_48014169
ES.15358.1	chr17	+	1876	5	Intergenic	novelGene_12811	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	2.29128784747792	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAGTTTAGAATTTAA	NA	False	NA	NA	False	AATAAA	-38	NA	48021247	48025092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48021379_48021931_48022589_48022810_48022898_48023277_48023442_48024255
ES.15358.2	chr17	+	2681	4	Intergenic	novelGene_12812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGTTTGCGCCTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	48021252	48025073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48021828_48021931_48022589_48022810_48023442_48024255
ES.15358.3	chr17	+	1788	4	Intergenic	novelGene_12813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAG	NA	False	NA	NA	False	AATATA	-13	NA	48021844	48025048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48022589_48022810_48022898_48023277_48023442_48024255
ES.15358.4	chr17	+	1043	3	Intergenic	novelGene_12814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	4	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAG	NA	False	NA	NA	False	AATATA	-13	NA	48022425	48025048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48022589_48022810_48022898_48024255
ES.15359.1	chr17	-	3813	1	Intergenic	novelGene_12810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCACATGCATGTG	NA	False	NA	NA	False	TATAAA	-12	NA	48022555	48018742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48018700_48022600
ES.1536.1	chr1	-	209	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATGATTTGTAGTGT	NA	False	NA	NA	False	AATACA	-8	NA	148646505	148646296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_148646300_148646500
ES.15360.1	chr17	+	1390	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48037764	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.10	chr17	+	932	1	NIC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	6707	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48044475	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48044500_48045400
ES.15360.2	chr17	+	1169	7	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	2239	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.877931843349	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48040007	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48040190_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.3	chr17	+	1260	6	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	2982	-3	2980	3	3prime_fragment	FALSE	canonical	3	54	junction_1	149.361842516755	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTGAGTCATTTGTA	NA	False	NA	19	True	AATAAA	-19	NA	48040748	48045410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.4	chr17	+	932	6	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	3416	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.183534288379	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTGAGTCATTTGTA	NA	False	NA	19	True	AATAAA	-19	NA	48041184	48045410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48041246_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.5	chr17	+	894	5	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	3731	0	3729	0	3prime_fragment	FALSE	canonical	3	133	junction_1	119.423615755009	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48041497	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.6	chr17	+	1704	4	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	4507	0	4505	0	3prime_fragment	FALSE	canonical	3	283	junction_1	65.5303152916436	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48042273	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48043430_48043885_48044037_48044681_48044781_48045109
ES.15360.7	chr17	+	885	3	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	5785	-3	5783	3	3prime_fragment	FALSE	canonical	3	421	junction_1	1	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTGAGTCATTTGTA	NA	False	NA	19	True	AATAAA	-19	NA	48043551	48045410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48044037_48044681_48044781_48045109
ES.15360.8	chr17	+	632	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5798	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48043566	48045407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
ES.15360.9	chr17	+	787	2	ISM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	6521	4	6519	-4	3prime_fragment	FALSE	canonical	3	423	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACCAGCCTGTTGAGTC	NA	False	NA	12	True	AATAAA	-12	NA	48044287	48045403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48044781_48045109
ES.15361.1	chr17	+	2385	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	-39	-4	-39	4	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCTCTGCGGTGCGT	NA	False	NA	22	True	AGTAAA	-22	NA	48047915	48103348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.10	chr17	+	2371	9	FSM	ENSMUSG00000023990.19	ENSMUST00000113288.8	2328	9	-44	1	-44	-1	multi-exon	FALSE	canonical	1	4	junction_1	151.923449062349	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTATGTTGTCCTGGCTCT	NA	False	NA	13	True	AGTAAA	-13	NA	48048808	48103339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48049130_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.11	chr17	+	2339	9	NIC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	778	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	141.519378090069	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48050605	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.12	chr17	+	2104	10	NNC	ENSMUSG00000023990.19	novel	2296	8	NA	NA	911	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	184.099476598796	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48050738	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48050894_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259_48102341_48102442
ES.15361.13	chr17	+	2054	8	FSM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	242	0	-193	0	multi-exon	FALSE	canonical	3	431	junction_3	28.7025562397128	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	7213	False	NA	14	True	AGTAAA	-14	NA	48096886	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.2	chr17	+	1640	8	NNC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.910561737185	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTCCTGGCTCTGCGG	NA	False	NA	17	True	AGTAAA	-17	NA	48047962	48103343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48048001_48097422_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.4	chr17	+	2087	8	NIC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	159.910561737185	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48047973	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48048242_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.5	chr17	+	2234	8	NIC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	163.675512735986	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48047977	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48048242_48096889_48097122_48097202_48097458_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.6	chr17	+	3321	8	NIC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	31	0	intron_retention	FALSE	canonical	3	433	junction_7	27.0170014499563	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48047985	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ES.15361.8	chr17	+	2160	10	NNC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.169612285029	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48048030	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259_48102341_48102442
ES.15361.9	chr17	+	1545	5	NNC	ENSMUSG00000023990.19	novel	2342	9	NA	NA	230	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	201.576908399747	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	False	NA	14	True	AGTAAA	-14	NA	48048184	48103340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48048242_48096889_48097122_48097202_48097277_48100632_48100734_48102259
ES.15362.1	chr17	-	177	1	Intergenic	novelGene_12815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	48056465	48056288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48056300_48056500
ES.15363.1	chr17	-	176	1	Intergenic	novelGene_12816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	48057774	48057598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48057600_48057800
ES.15364.1	chr17	-	119	1	Intergenic	novelGene_12817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	48101853	48101734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48101700_48101900
ES.15365.1	chr17	-	189	1	Intergenic	novelGene_12818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACATATACATGTG	NA	False	NA	0	True	NA	NA	NA	48115913	48115724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48115700_48115900
ES.15366.1	chr17	+	164	1	Intergenic	novelGene_12819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	48121531	48121695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48121500_48121700
ES.15367.1	chr17	+	158	1	Intergenic	novelGene_12820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48121716	48121874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48121700_48121900
ES.15368.1	chr17	+	144	1	Intergenic	novelGene_12822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAACTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48137322	48137466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48137300_48137500
ES.15369.1	chr17	-	1391	5	NIC	ENSMUSG00000032717.15	novel	1371	5	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCCCAGGACTCTTTAC	2116	False	NA	-5	True	AATAAA	-19	NA	48144192	48126255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144130
ES.15369.2	chr17	-	1345	5	FSM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	24	2	5	-2	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCCATCTCCCCAGGAC	2116	False	NA	-12	True	AATAAA	-12	NA	48144192	48126262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144169
ES.15369.3	chr17	-	177	1	Intergenic	novelGene_12821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCATAAAACTTACTCT	9018	False	NA	NA	False	NA	NA	NA	48137290	48137113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48137100_48137300
ES.15369.4	chr17	-	3817	1	Intergenic	novelGene_12823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	4988	False	NA	NA	False	NA	NA	NA	48141320	48137503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48137500_48141300
ES.1537.1	chr1	+	181	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATATATATGAGTGC	NA	False	NA	NA	False	NA	NA	NA	148821591	148821772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_148821600_148821800
ES.15370.1	chr17	+	158	1	Intergenic	novelGene_12824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAGTAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	48205096	48205254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48205100_48205300
ES.15371.1	chr17	+	4935	1	Intergenic	novelGene_12826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48220200	48225135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48220200_48225100
ES.15371.2	chr17	+	177	1	Intergenic	novelGene_12827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	48222902	48223079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48222900_48223100
ES.15372.1	chr17	-	3795	17	NNC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-15	1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_14	41.8139013218092	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTGTCACCAAGGT	NA	False	NA	-1	True	ATTAAA	-19	NA	48235416	48178056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
ES.15372.11	chr17	-	3476	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	8	515	8	116	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACAGTGTCTGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	48235562	48178572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.12	chr17	-	3296	16	NIC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	18	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	50.7798735283533	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCTTTTTCTTTTG	NA	False	NA	0	True	NA	NA	NA	48235552	48178685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48215220_48215460_48235130
ES.15372.13	chr17	-	2910	16	NIC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	122	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	41.8294951758525	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGCTTTTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	48235203	48178686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48215220_48215460_48235130
ES.15372.15	chr17	-	3803	16	NIC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	-12	0	intron_retention	FALSE	canonical	3	96	junction_11	20.1152236433559	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235582	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.16	chr17	-	2952	16	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	44.8990967491428	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235393	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48235130
ES.15372.17	chr17	-	3520	17	FSM	ENSMUSG00000023991.17	ENSMUST00000097311.9	3197	17	-323	0	-113	0	multi-exon	FALSE	canonical	3	24	junction_7	35.8812603422734	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235683	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.19	chr17	-	3539	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-337	-4	-168	0	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235738	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.2	chr17	-	4735	16	NIC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	2	0	intron_retention	TRUE	canonical	3	24	junction_7	36.1656681889822	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235568	48178057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.20	chr17	-	3213	17	NNC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	43.9793541761359	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235358	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186671_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.23	chr17	-	3150	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	38.180492401225	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235400	48178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
ES.15372.28	chr17	-	3497	16	NIC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_10	20.0904620819599	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTGTTGGCTTTT	NA	False	NA	-7	True	NA	NA	NA	48235400	48178692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.29	chr17	-	3846	16	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-26	0	intron_retention	FALSE	canonical	3	24	junction_7	40.9289899975827	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTGTTGGCTTTT	NA	False	NA	-7	True	NA	NA	NA	48235596	48178692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.31	chr17	-	3360	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	51.9133894096696	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235589	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191269_48191694_48191818_48199049_48199146_48215220_48215460_48235143
ES.15372.32	chr17	-	2989	16	NNC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-15924	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.7628814483111	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48215282	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179858_48179908_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220
ES.15372.33	chr17	-	3194	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.4562921322553	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235384	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186768_48186849_48188065_48188154_48188852_48188958_48189208_48189447_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.34	chr17	-	4043	16	NNC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-17	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	45.4694036321862	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235587	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179858_48179908_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.35	chr17	-	3606	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	2	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.8081927282991	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235568	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179847_48179898_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.36	chr17	-	3418	17	NNC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	47.7598157450382	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235568	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189447_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.38	chr17	-	3700	15	NNC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	2	-7	intron_retention	FALSE	canonical	1	1	junction_6	53.3701456713357	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235568	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186598_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
ES.15372.39	chr17	-	3503	16	NNC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	4	-7	intron_retention	FALSE	canonical	1	1	junction_6	41.8420309683404	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235356	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186671_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.4	chr17	-	4106	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	-273	-635	-104	0	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235674	48178057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.40	chr17	-	6236	8	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	680	-7	intron_retention	FALSE	canonical	3	128	junction_4	13.8460927959582	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48189198	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065
ES.15372.42	chr17	-	6666	16	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-26	-7	intron_retention	FALSE	canonical	3	59	junction_10	26.9641737619877	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235596	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.44	chr17	-	3390	17	NNC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	-45	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	47.4983141148189	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAAAACTTTTTGTT	NA	False	NA	-14	True	NA	NA	NA	48235615	48178699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
ES.15372.45	chr17	-	3016	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	14482	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	40.2988833592198	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAACCAAAACTTTTTG	NA	False	NA	-16	True	NA	NA	NA	48220843	48178701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48220745
ES.15372.47	chr17	-	2386	3	FSM	ENSMUSG00000023991.17	ENSMUST00000153752.2	788	3	31	-1629	5	1629	multi-exon	FALSE	canonical	3	147	junction_1	10.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTCTGAGAGGGTGTC	NA	False	NA	NA	False	NA	NA	NA	48235320	48197188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48199146_48215220_48215460_48235130
ES.15372.48	chr17	-	2865	1	Intergenic	novelGene_12825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	48210013	48207148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48207100_48210000
ES.15372.49	chr17	-	3771	2	ISM	ENSMUSG00000023991.17	ENSMUST00000153752.2	788	3	-219	13311	0	-13311	5prime_fragment	FALSE	canonical	3	168	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	48235570	48212128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_48215460_48235130
ES.15372.7	chr17	-	4154	16	NIC	ENSMUSG00000023991.17	novel	3999	17	NA	NA	-51	-2	intron_retention	FALSE	canonical	1	2	junction_12	40.1809241639197	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTGTGTGTCACCAA	NA	False	NA	-4	True	ATTAAA	-16	NA	48235621	48178059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189680_48191187_48191269_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ES.15372.8	chr17	-	4011	17	NNC	ENSMUSG00000023991.17	novel	3197	17	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	47.4983141148189	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTGTGTGTCACCAA	NA	False	NA	-4	True	ATTAAA	-16	NA	48235596	48178059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
ES.15373.1	chr17	-	250	1	Intergenic	novelGene_12828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTGGGAGAC	NA	False	NA	NA	False	AAAAAG	-41	NA	48240008	48239758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48239800_48240000
ES.15374.1	chr17	+	252	1	Intergenic	novelGene_12829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAAGCAAGTTCA	325	False	NA	NA	False	NA	NA	NA	48248175	48248427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48248200_48248400
ES.15375.1	chr17	+	128	1	Intergenic	novelGene_12830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGAAACTTGCTAATT	NA	False	NA	NA	False	NA	NA	NA	48262056	48262184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48262100_48262200
ES.15376.1	chr17	+	209	1	Intergenic	novelGene_12831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	48282022	48282231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48282000_48282200
ES.15377.1	chr17	-	170	1	Intergenic	novelGene_12832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	48307522	48307352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48307400_48307500
ES.15378.1	chr17	+	1156	1	Intergenic	novelGene_12833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGTTTTGCTTTTA	642	False	NA	NA	False	AATAAA	-17	NA	48352707	48353863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48352700_48353900
ES.15379.1	chr17	+	203	1	Intergenic	novelGene_12834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCGC	NA	False	NA	NA	False	AAGAAA	-8	NA	48370149	48370352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48370100_48370400
ES.1538.1	chr1	+	173	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	149164922	149165095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_149164900_149165100
ES.15380.1	chr17	-	230	1	Intergenic	novelGene_12835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGCTATCAGTATCA	NA	False	NA	NA	False	AATACA	-24	NA	48371574	48371344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48371300_48371600
ES.15381.1	chr17	+	3911	1	Intergenic	novelGene_12836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	48386093	48390004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48386100_48390000
ES.15382.1	chr17	-	1369	2	Antisense	novelGene_ENSMUSG00000051682.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATGTACTGATTCAATG	NA	False	NA	NA	False	AATAAA	-23	NA	48579791	48552306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_48553129_48579244
ES.15383.1	chr17	+	3429	5	FSM	ENSMUSG00000071068.8	ENSMUST00000233092.2	2094	5	-190	-1145	-190	1145	multi-exon	FALSE	canonical	1	2	junction_2	1.6583123951777	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTGTGCTTCCCTGGA	1378	False	NA	6	True	NA	NA	NA	48606777	48618194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48607625_48609639_48609961_48614907_48615302_48616146_48616254_48616434
ES.15384.1	chr17	-	840	3	Antisense	novelGene_ENSMUSG00000071068.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCCTTGGCCTTGAGT	NA	False	NA	NA	False	NA	NA	NA	48622172	48615636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_48616222_48620308_48620484_48622092
ES.15385.1	chr17	+	2440	7	NNC	ENSMUSG00000043740.16	novel	994	7	NA	NA	-282	1327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.46249406456535	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGATGTTGATTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	48622886	48632554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48622984_48623323_48623514_48623758_48624071_48626178_48626243_48628005_48628134_48629438_48629498_48630964
ES.15386.1	chr17	+	1927	1	Intergenic	novelGene_12837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCTGTTGAAACCAAAT	NA	False	NA	NA	False	NA	NA	NA	48638553	48640480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48638600_48640500
ES.15387.1	chr17	-	3592	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	116	-2	-25	-2	multi-exon	TRUE	canonical	3	22	junction_4	12.5492778676703	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGATTTTTGGTGTTTG	NA	False	NA	-6	True	AATAAA	-24	NA	48716818	48693914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
ES.15387.11	chr17	-	3601	10	NNC	ENSMUSG00000023994.14	novel	3645	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1859833786536	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGTGACTGGATTTTT	NA	False	NA	-14	True	AATAAA	-16	NA	48716754	48693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700575_48702677_48702825_48706009_48706097_48707465_48707609_48716653
ES.15387.13	chr17	-	4730	7	NIC	ENSMUSG00000023994.14	novel	3706	9	NA	NA	2	-9	intron_retention	FALSE	canonical	3	22	junction_5	12.3883906227654	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTAGAAAAAGTGA	NA	False	NA	-24	True	AATAAA	-6	NA	48716776	48693932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48696371_48698276_48699078_48699367_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
ES.15387.14	chr17	-	3590	10	NIC	ENSMUSG00000023994.14	novel	3653	10	NA	NA	-1	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	19.6581902637156	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTAGAAAAAGTGA	NA	False	NA	-24	True	AATAAA	-6	NA	48716759	48693932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699529_48700207_48700314_48700448_48700581_48702677_48702825_48706012_48706094_48707465_48707609_48716653
ES.15387.2	chr17	-	3539	9	NNC	ENSMUSG00000023994.14	novel	3706	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.6514981296757	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716749	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699529_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707633_48716653
ES.15387.4	chr17	-	3604	10	FSM	ENSMUSG00000023994.14	ENSMUST00000160319.8	1407	10	-5	-2192	-5	0	multi-exon	FALSE	canonical	3	12	junction_8	15.1053910742547	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716763	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
ES.15387.5	chr17	-	5632	8	NIC	ENSMUSG00000023994.14	novel	3706	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	22	junction_4	12.4080290003477	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716763	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48702825_48707465_48707609_48716653
ES.15387.6	chr17	-	3569	9	NIC	ENSMUSG00000023994.14	novel	3706	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.067134345372	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716815	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
ES.15387.7	chr17	-	3634	10	FSM	ENSMUSG00000023994.14	ENSMUST00000078800.13	3653	10	15	4	0	0	multi-exon	TRUE	canonical	3	15	junction_8	14.2837212013545	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716778	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
ES.15387.8	chr17	-	3714	10	NNC	ENSMUSG00000023994.14	novel	1407	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.9944436726251	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716764	48693916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699517_48700207_48700314_48700448_48700581_48702677_48702825_48703163_48703360_48707465_48707609_48716653
ES.15388.1	chr17	+	1182	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	-117	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGTCTGTGTTCTGGA	NA	False	NA	25	True	AATAAA	-33	NA	48716924	48724298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ES.15388.10	chr17	+	2490	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_5	390.320586185254	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717072	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721258_48721313_48722248_48723559_48723711
ES.15388.11	chr17	+	705	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	31	-448	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	391.766767350167	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGTGGTCTTTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	48717072	48723834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717266_48717855_48717933_48718291_48718437_48721258_48721313_48722248_48722362_48723711
ES.15388.12	chr17	+	7211	1	Genic_Genomic	ENSMUSG00000040771.15	novel	NA	NA	NA	NA	31	1	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	False	NA	10	True	AATAAA	-18	NA	48717072	48724283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_48717100_48724300
ES.15388.13	chr17	+	3471	3	NIC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	2	intron_retention	FALSE	canonical	3	831	junction_2	24	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAACGTCTGTGTTCTG	NA	False	NA	23	True	AATAAA	-31	NA	48717072	48724296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48718437_48721253_48721313_48722248
ES.15388.18	chr17	+	2511	5	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	33	2	intron_retention	FALSE	canonical	3	141	junction_1	325.838533632841	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717074	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248
ES.15388.19	chr17	+	5328	4	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	33	2	intron_retention	FALSE	canonical	3	141	junction_1	356.931365951495	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717074	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717266_48717852_48717933_48718291_48721313_48722248
ES.15388.2	chr17	+	1376	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	-33	-19	-33	7	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTCTGTGTTCTGGATCT	NA	False	NA	28	True	AATAAA	-36	NA	48717008	48724301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ES.15388.20	chr17	+	6274	2	NIC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	33	2	intron_retention	FALSE	canonical	3	831	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717074	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48721313_48722248
ES.15388.21	chr17	+	1285	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	402.584351409739	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717074	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717401_48717855_48717933_48718291_48718437_48721261_48721313_48722248_48722362_48723711
ES.15388.23	chr17	+	2325	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_5	384.365659236098	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTTGCACACATGAAC	NA	False	NA	11	True	AATAAA	-19	NA	48717107	48724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48723559_48723711
ES.15388.26	chr17	+	5767	3	NIC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	3	-2	intron_retention	FALSE	canonical	3	324	junction_1	253.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGAGGTTTGCACACAT	NA	False	NA	7	True	AATAAA	-15	NA	48717122	48724280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_48717401_48717855_48721313_48722248
ES.15388.27	chr17	+	1094	5	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	94	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	389.665561732109	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGAGGTTTGCACACAT	NA	False	NA	7	True	AATAAA	-15	NA	48717213	48724280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48722248_48722362_48723711
ES.15388.29	chr17	+	2369	4	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	145	0	intron_retention	FALSE	canonical	0	0	junction_1	374.30854771016	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTTTGCACACATGA	NA	False	NA	9	True	AATAAA	-17	NA	48717264	48724282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717401_48718291_48718437_48721258_48721313_48722248
ES.15388.3	chr17	+	1225	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-82	-8	-16	8	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGTGTTCTGGATCTT	NA	False	NA	29	True	AATAAA	-37	NA	48717025	48724302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ES.15388.30	chr17	+	1434	5	Fusion	ENSMUSG00000040771.15_ENSMUSG00000117104.2	novel	1324	6	NA	NA	149	384	multi-exon	FALSE	canonical	0	0	junction_4	381.49795215702	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGTTCTGTTATTAG	NA	False	NA	NA	False	GATAAA	-13	NA	48717268	48724678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_48717401_48717855_48717933_48718291_48718437_48722248_48722362_48723711
ES.15388.32	chr17	+	1147	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	168	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGTCTGTGTTCTGGA	NA	False	NA	25	True	AATAAA	-33	NA	48717287	48724298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722412_48723711
ES.15388.33	chr17	+	501	2	ISM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	5218	118	5206	-106	3prime_fragment	FALSE	canonical	0	0	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTGTTAATCTCACCA	NA	False	NA	-97	True	TTTAAA	-19	NA	48722325	48724176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48722362_48723711
ES.15388.7	chr17	+	2659	5	ISM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	31	-16	31	4	intron_retention	FALSE	canonical	3	324	junction_1	247.498863633755	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGTCTGTGTTCTGGA	NA	False	NA	25	True	AATAAA	-33	NA	48717072	48724298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248
ES.15388.9	chr17	+	2372	5	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	31	4	intron_retention	FALSE	canonical	3	72	junction_1	355.480220968762	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTGCACACATGAACGT	NA	False	NA	13	True	AATAAA	-21	NA	48717072	48724286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248
ES.15389.1	chr17	-	5800	1	Antisense	novelGene_ENSMUSG00000117104.2_AS_novelGene_ENSMUSG00000040771.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48724617	48718817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_48718800_48724600
ES.1539.1	chr1	-	164	1	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	149377280	149377116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_149377100_149377300
ES.15390.1	chr17	-	1373	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	49	-2	49	2	multi-exon	FALSE	canonical	3	57	junction_2	11.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTGTTCTCTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	48739909	48726256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48726662_48729968_48730534_48739506
ES.15390.2	chr17	-	3304	2	ISM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	197	1226	-115	-1226	5prime_fragment	FALSE	canonical	3	57	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGGAGTTTTAACTGA	NA	False	NA	NA	False	AATAAA	-41	NA	48739761	48727484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_48730534_48739506
ES.15390.3	chr17	-	2774	1	Intergenic	novelGene_12838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCTCTGACCAGCTAGA	898	False	NA	NA	False	NA	NA	NA	48737846	48735072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48735100_48737800
ES.15390.4	chr17	-	482	2	FSM	ENSMUSG00000040694.5	ENSMUST00000233707.2	317	2	-115	-50	-115	50	multi-exon	FALSE	canonical	2	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACCCGACTTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	48739761	48738480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48738708_48739506
ES.15391.1	chr17	-	174	1	Intergenic	novelGene_12839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTAAGTAAGATTG	NA	False	NA	NA	False	NA	NA	NA	48752172	48751998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48752000_48752200
ES.15392.1	chr17	-	929	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	28	-1	-2	1	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGGTGTAAGGTGGAA	NA	False	NA	0	True	AATAAA	-20	NA	48758522	48755461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
ES.15392.2	chr17	-	1167	4	NIC	ENSMUSG00000023995.13	novel	956	5	NA	NA	2	-1	intron_retention	FALSE	canonical	3	26	junction_3	2.16024689946929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCCTGGTGTAAGGTGG	NA	False	NA	-2	True	AATAAA	-18	NA	48758543	48755463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_48756190_48756910_48757099_48757899_48758090_48758480
ES.15393.1	chr17	+	2957	9	NNC	ENSMUSG00000043592.16	novel	1786	5	NA	NA	-561	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.77140239642442	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	AATAAA	-26	NA	48761367	48775714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48761559_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ES.15393.10	chr17	+	1648	4	ISM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	8674	8	1171	0	3prime_fragment	FALSE	canonical	3	16	junction_3	5.31245915016974	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATACTGGTACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	48770602	48775706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48770673_48771469_48771571_48771943_48772058_48774343
ES.15393.2	chr17	+	3824	9	NNC	ENSMUSG00000043592.16	novel	2838	9	NA	NA	-561	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.2948712959415	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	AATAAA	-26	NA	48761367	48775714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48762005_48766566_48767434_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ES.15393.3	chr17	+	3235	10	NNC	ENSMUSG00000043592.16	novel	2838	9	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.52157755058401	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGGTACTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	48761374	48775708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48761559_48761709_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ES.15393.4	chr17	+	3226	10	NNC	ENSMUSG00000043592.16	novel	2838	9	NA	NA	-541	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9.37819904267075	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATACTGGTACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	48761387	48775706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48761559_48761709_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771463_48771571_48771943_48772058_48774343
ES.15393.5	chr17	+	3402	9	NNC	ENSMUSG00000043592.16	novel	2838	9	NA	NA	-539	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.60387291669356	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAAAATACTGGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	48761389	48775704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772093_48774343
ES.15393.7	chr17	+	2899	1	Intergenic	novelGene_12840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48762836	48765735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48762800_48765700
ES.15393.8	chr17	+	3515	6	NNC	ENSMUSG00000043592.16	novel	2838	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	9.62496753241277	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	AATAAA	-26	NA	48769393	48775714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48772657
ES.15393.9	chr17	+	3886	6	ISM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	7489	-2081	6	2081	3prime_fragment	FALSE	canonical	3	16	junction_5	4.12795348811006	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGGTATGGG	NA	False	NA	NA	False	NA	NA	NA	48769417	48777795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ES.15394.1	chr17	-	2413	1	Intergenic	novelGene_12841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	48794878	48792465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_48792500_48794900
ES.15394.2	chr17	-	2333	2	Antisense	novelGene_ENSMUSG00000043592.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	48794879	48792465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_48792581_48792661
ES.15395.1	chr17	+	5800	1	Intergenic	novelGene_12842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48833202	48839002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48833200_48839000
ES.15396.1	chr17	-	277	2	Antisense	novelGene_ENSMUSG00000117019.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTATTCATTACTTC	NA	False	NA	NA	False	AATACA	-13	NA	48887159	48875699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_48875891_48887073
ES.15397.1	chr17	+	4844	1	Intergenic	novelGene_12843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCTCCTCTACCCCTGC	NA	False	NA	NA	False	NA	NA	NA	48918503	48923347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_48918500_48923300
ES.15398.2	chr17	-	738	4	Antisense	novelGene_ENSMUSG00000040490.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATGTGTTGTATTTG	NA	False	NA	-6	True	TATAAA	-15	NA	49270925	49254822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_49255240_49265699_49265821_49266949_49267063_49270838
ES.15398.4	chr17	-	505	2	Antisense	novelGene_ENSMUSG00000040490.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGGGACTGTAGCTC	NA	False	NA	NA	False	AATACA	-19	NA	49265801	49258991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_49259395_49265699
ES.15398.5	chr17	-	4109	1	Intergenic	novelGene_12844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCGTATCTGTATTTTAA	NA	False	NA	NA	False	TATAAA	-18	NA	49267140	49263031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_49263000_49267100
ES.15398.6	chr17	-	6611	3	Antisense	novelGene_ENSMUSG00000040490.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTACTGCGTATCTGT	NA	False	NA	NA	False	TATAAA	-11	NA	49270912	49263038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_49265821_49266971_49268412_49268523
ES.15398.7	chr17	-	3369	3	Antisense	novelGene_ENSMUSG00000040490.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTACTGCGTATCTGT	NA	False	NA	NA	False	TATAAA	-11	NA	49270920	49263038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_49264223_49264444_49266036_49270326
ES.15399.1	chr17	-	176	1	Intergenic	novelGene_12845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	49341731	49341555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_49341600_49341700
ES.154.1	chr1	-	6916	2	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTCCGTGTCGTTATTC	NA	False	NA	NA	False	NA	NA	NA	16905288	16898327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16898436_16898480
ES.154.2	chr1	-	5971	4	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	16905288	16898330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16898436_16898521_16899485_16900292_16904173_16904265
ES.154.3	chr1	-	5284	5	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	16905288	16898330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16898436_16898521_16898663_16899349_16899485_16900292_16904173_16904265
ES.154.4	chr1	-	6656	3	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	16905072	16898331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16898436_16898480_16902754_16902793
ES.154.5	chr1	-	4531	3	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACGGTTTCCGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	16905321	16898332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16898436_16898480_16902610_16905022
ES.154.6	chr1	-	2836	2	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	93	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16905306	16902377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16904173_16904265
ES.154.7	chr1	-	2647	2	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTAGAATTCTCCCA	NA	False	NA	NA	False	NA	NA	NA	16905322	16902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_16904173_16904265
ES.1540.1	chr1	+	4314	10	FSM	ENSMUSG00000032487.9	ENSMUST00000035065.9	4453	10	71	68	71	-68	multi-exon	TRUE	canonical	0	0	junction_4	1.03040205505508	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTATTTTTATACT	NA	False	NA	NA	False	AATAAA	-13	NA	149975852	149983910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_149976027_149976724_149976842_149976963_149977108_149977741_149977886_149978346_149978529_149979425_149979510_149979619_149979867_149980033_149980321_149980692_149980841_149981123
ES.15400.1	chr17	+	2654	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	-6	-2	-4	-1	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGGGGACTCTTGTCT	NA	False	NA	8	True	AATAAA	-24	NA	49735385	49762462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
ES.15400.2	chr17	+	3245	1	NIC	ENSMUSG00000064120.15	novel	729	4	NA	NA	1	-3923	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGCCAAATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	49735392	49738637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_49735400_49738600
ES.15400.3	chr17	+	2627	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	-40	1	6	-1	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGGGGACTCTTGTCT	NA	False	NA	8	True	AATAAA	-24	NA	49735397	49762462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
ES.15400.4	chr17	+	1554	12	NIC	ENSMUSG00000064120.15	novel	2646	11	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	10.965008206047	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGGATTGGGGACTCT	NA	False	NA	3	True	AATAAA	-19	NA	49735425	49762457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057_49761230_49762284
ES.15400.5	chr17	+	2978	4	NIC	ENSMUSG00000064120.15	novel	729	4	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.0163320241336	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTTTGGTCATAAT	NA	False	NA	NA	False	NA	NA	NA	49735472	49744971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_49735593_49740197_49740325_49742122_49742225_49742342
ES.15400.6	chr17	+	2279	1	NIC	ENSMUSG00000064120.15	novel	729	4	NA	NA	2330	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTCTTGGTCATGA	3815	False	NA	NA	False	NA	NA	NA	49742553	49744832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_49742600_49744800
ES.15400.7	chr17	+	5897	1	Genic_Genomic	ENSMUSG00000064120.15	novel	NA	NA	NA	NA	2215	4960	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTCTGACTGCCTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	49761526	49767423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_49761500_49767400
ES.15400.8	chr17	+	260	1	Antisense	novelGene_ENSMUSG00000040260.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACGCTGTAGAGTT	NA	False	NA	NA	False	TATAAA	-12	NA	49762856	49763116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_49762900_49763100
ES.15401.1	chr17	+	1685	12	FSM	ENSMUSG00000023999.15	ENSMUST00000024798.12	1676	12	-10	1	-10	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.02851895445316	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAAGTAGCAGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	49922153	50062415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_49922331_49927620_49927731_49931479_49931555_49978060_49978209_49982304_49982415_49993418_49993549_50014537_50014745_50021022_50021167_50022091_50022179_50029268_50029373_50060849_50060956_50062128
ES.15402.1	chr17	+	1373	5	ISM	ENSMUSG00000023999.15	ENSMUST00000159354.2	3327	8	8185	1	8185	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTGTGTCTGATCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	50202840	50216874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_50202911_50208279_50208328_50208788_50208879_50210603_50210699_50215804
ES.15403.1	chr17	-	3742	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	287	0	110	0	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATATATTTTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	50497415	50299284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.10	chr17	-	1794	7	FSM	ENSMUSG00000039316.15	ENSMUST00000156094.2	1759	7	-35	0	-35	0	multi-exon	FALSE	canonical	3	80	junction_1	10.0457287772798	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTGTCATAGTAAGAGC	NA	False	NA	NA	False	AATAAA	-14	NA	50497560	50343650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.11	chr17	-	1545	4	NNC	ENSMUSG00000039316.15	novel	1759	7	NA	NA	47761	-17844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.9491450638052	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCTGTAACTCTCATA	6133	False	NA	NA	False	AATAGA	-18	NA	50449764	50361494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50362656_50393595_50393705_50414097_50414285_50449676
ES.15403.12	chr17	-	1318	5	ISM	ENSMUSG00000039316.15	ENSMUST00000156094.2	1759	7	-98	18515	79	-18515	5prime_fragment	FALSE	canonical	3	90	junction_1	7.3824115301167	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGTAGACAAGAGAAAG	NA	False	NA	NA	False	AATGAA	-13	NA	50497623	50362165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.2	chr17	-	3294	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	41	694	41	309	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTCAGCCATATCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	50497661	50299978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.3	chr17	-	3136	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	-108	1001	-108	2	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGTGAGAAGTATTTA	NA	False	NA	-26	True	AATAAA	-15	NA	50497810	50300285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.4	chr17	-	1444	4	NNC	ENSMUSG00000039316.15	novel	2385	8	NA	NA	89664	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.5509482765056	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGGTGAGAAGTATT	NA	False	NA	-28	True	AATAAA	-13	NA	50311696	50300287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50301510_50309659_50309742_50311281_50311386_50311660
ES.15403.5	chr17	-	2839	10	NNC	ENSMUSG00000039316.15	novel	4029	10	NA	NA	349	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.2903494354996	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGGTGAGAAGTATT	NA	False	NA	-28	True	AATAAA	-13	NA	50497176	50300287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50496909
ES.15403.6	chr17	-	1490	4	NNC	ENSMUSG00000039316.15	novel	2385	8	NA	NA	67800	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	40.4337592722825	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGGTGAGAAGTATT	NA	False	NA	-28	True	AATAAA	-13	NA	50333560	50300287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50301510_50309659_50309742_50311281_50311386_50333478
ES.15403.8	chr17	-	2719	11	NNC	ENSMUSG00000039316.15	novel	4029	10	NA	NA	185	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.0250996809151	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACAGCCCTGTCTCTTT	NA	False	NA	-82	True	NA	NA	NA	50497340	50300341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50301504_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50392669_50392785_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ES.15403.9	chr17	-	2213	2	Intergenic	novelGene_12846	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	95	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCAGCAGCTGGACCCT	NA	False	NA	NA	False	NA	NA	NA	50320121	50306029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_50306057_50317935
ES.15404.1	chr17	+	157	1	Intergenic	novelGene_12847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	50575930	50576087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_50575900_50576100
ES.15405.1	chr17	-	3159	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	-128	-55	-128	53	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGACAATGTGTAAGTC	NA	False	NA	50	True	AGTAAA	-14	NA	50600792	50586369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.12	chr17	-	4059	2	FSM	ENSMUSG00000010592.10	ENSMUST00000233756.2	457	2	-1952	-1650	-833	-4	multi-exon	FALSE	canonical	3	591	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATCACTGACTTACT	NA	False	NA	-9	True	AATAAA	-12	NA	50592303	50586428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50588340_50590155
ES.15405.14	chr17	-	2611	9	NNC	ENSMUSG00000010592.10	novel	2820	11	NA	NA	-1125	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	226.598729861842	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATCACTGACTTACT	NA	False	NA	-9	True	AATAAA	-12	NA	50595734	50586428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50588340_50590155_50590255_50591265_50591380_50592449_50592516_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641
ES.15405.17	chr17	-	2947	11	NNC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.044380743063	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATCACTGACTTACT	NA	False	NA	-9	True	AATAAA	-12	NA	50600625	50586428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50588340_50590141_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.19	chr17	-	2798	11	NNC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	163.165437516651	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGAGTCAAGTATTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	50600625	50586562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50588340_50590155_50590255_50591266_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.2	chr17	-	2963	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	-34	2	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTTACTGTCCTGTC	NA	False	NA	-1	True	AATAAA	-20	NA	50600698	50586420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.22	chr17	-	4646	9	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-139	intron_retention	FALSE	canonical	3	445	junction_2	50.9208945325983	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGAGTCAAGTATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	50600625	50586563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.23	chr17	-	2753	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	-4	-139	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGAGTCAAGTATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	50600631	50586563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.25	chr17	-	1892	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	660	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGTCACTTAAAAGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	50600625	50587418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.26	chr17	-	1149	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	34	1793	-3	-86	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAAATTTGACAAATCA	NA	False	NA	-12	True	ATTAAA	-25	NA	50600630	50588217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.5	chr17	-	4788	9	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	1	intron_retention	FALSE	canonical	3	445	junction_2	50.9208945325983	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGACTTACTGTCCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	50600625	50586421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.6	chr17	-	3582	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	352	junction_3	69.2378259566971	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACTGACTTACTGTCCT	NA	False	NA	-4	True	AATAAA	-17	NA	50600625	50586423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_50588340_50590155_50590255_50591265_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15405.9	chr17	-	2854	12	NNC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.589999466175	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATCACTGACTTACT	NA	False	NA	-9	True	AATAAA	-12	NA	50600625	50586428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_50586495_50586573_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ES.15406.1	chr17	+	201	1	Intergenic	novelGene_12848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAGAAAGCTAATAAATA	6327	False	NA	NA	False	NA	NA	NA	50602824	50603025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_50602800_50603000
ES.15407.1	chr17	+	4916	8	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-81219	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	45.7968005299007	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCAGTACATGCTTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	50735211	50995515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50735686_50816392_50816966_50903081_50903298_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.10	chr17	+	4306	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-341	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.5085458849755	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCCAATAGCAGTACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	50816089	50995508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.11	chr17	+	4166	6	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-312	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	41.4584128977461	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTCCAATAGCAGTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	50816118	50995507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50994739
ES.15407.12	chr17	+	3896	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-295	-404	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	30.0111090542597	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816135	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816213_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.13	chr17	+	127	2	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-269	-105673	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50816161	50816468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816213_50816392
ES.15407.14	chr17	+	4253	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-263	-15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	30.0111090542597	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATGATATTTCTCCAA	NA	False	NA	NA	False	ATTAAA	-6	NA	50816167	50995497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816213_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.15	chr17	+	334	1	Genic_Genomic	ENSMUSG00000038910.8	novel	NA	NA	NA	NA	-263	-105640	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAGAAAAAGCGGAA	NA	False	NA	NA	False	NA	NA	NA	50816167	50816501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_50816200_50816500
ES.15407.16	chr17	+	4010	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-230	405	-230	-405	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGGCCCAAACATGCTG	NA	False	NA	NA	False	AATAAA	-20	NA	50816200	50995107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.17	chr17	+	4390	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	-211	6	-211	-6	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTCCAATAGCAGTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	50816219	50995506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.18	chr17	+	3225	5	NNC	ENSMUSG00000038910.8	novel	4433	3	NA	NA	-117	-404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2304012528552	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50816313	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816403_50913322_50915810_50918019_50918224_50947143_50947220_50994739
ES.15407.19	chr17	+	5064	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	145	-1024	145	1024	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGGACCTGTGATCCCA	NA	False	NA	NA	False	ACTAAA	-14	NA	50816575	50996536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.2	chr17	+	4019	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-80945	-404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.943171461855	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50735485	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50735686_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.20	chr17	+	179	1	Intergenic	novelGene_12849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	50833648	50833827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_50833600_50833800
ES.15407.3	chr17	+	4790	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-1017	5	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	27.886675432304	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGTACATGCTTTTAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	50815413	50995517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.4	chr17	+	4359	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-995	-404	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	27.886675432304	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50815435	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.5	chr17	+	3505	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-491	-406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.9777716015065	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGCCCAAACATGCT	NA	False	NA	NA	False	AATAAA	-19	NA	50815939	50995106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50815976_50816392_50816618_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.6	chr17	+	3726	6	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-472	-404	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	38.6812616133445	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50815958	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50815976_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50994739
ES.15407.7	chr17	+	3887	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-461	-404	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.2252414087041	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCCCAAACATGCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	50815969	50995108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816038_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15407.8	chr17	+	155	2	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-436	-105637	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGCGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	50815994	50816504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816038_50816392
ES.15407.9	chr17	+	3924	7	NNC	ENSMUSG00000038910.8	novel	4185	6	NA	NA	-361	-406	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.5085458849755	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGCCCAAACATGCT	NA	False	NA	NA	False	AATAAA	-19	NA	50816069	50995106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_50816177_50816392_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ES.15408.1	chr17	-	2487	1	Antisense	novelGene_ENSMUSG00000038910.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	50922882	50920395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_50920400_50922900
ES.15409.1	chr17	+	1376	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-164	-456	-164	456	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGTTGGAAATTTGA	NA	False	NA	NA	False	AATAAA	-34	NA	51005551	51006927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_51005600_51006900
ES.15409.2	chr17	+	1114	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-137	-221	-137	221	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTTAATATTGGACT	NA	False	NA	NA	False	ATTAAA	-15	NA	51005578	51006692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_51005600_51006700
ES.15409.3	chr17	+	1268	2	Genic_Genomic	ENSMUSG00000044645.9	novel	756	1	NA	NA	-111	437	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATGAAAAAAAAATAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	51005604	51006908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_51006027_51006062
ES.1541.1	chr1	+	172	1	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAGTAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	150075318	150075490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_150075300_150075500
ES.15410.1	chr17	+	3200	1	Intergenic	novelGene_12851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGGATGTGGCATT	NA	False	NA	NA	False	AATAAA	-13	NA	51097696	51100896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_51097700_51100900
ES.15411.1	chr17	-	5602	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-163	-4	4	4	multi-exon	TRUE	canonical	2	15	junction_3	5.14990698460791	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTCTTCCAGTCACA	NA	False	NA	NA	False	AATAAA	-24	NA	51486359	51040147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.10	chr17	-	4915	23	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	-7	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.78778735584619	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGATTAAGCCCTACTG	NA	False	NA	NA	False	AATACA	-17	NA	51486329	51040963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51043273_51048503_51048648_51048742_51048902_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.11	chr17	-	4863	23	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	-9	68	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	8.55089285367565	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGATTAAGCCCTACTG	NA	False	NA	NA	False	AATACA	-17	NA	51486348	51040963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51303428_51303517_51332101_51332233_51450386_51450450_51486127
ES.15411.14	chr17	-	4528	21	NIC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	-11	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	7.27925133513056	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACATGGTAATCATCAG	NA	False	NA	NA	False	TTTAAA	-29	NA	51486282	51041037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.16	chr17	-	2810	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-34	2659	-34	-1779	multi-exon	FALSE	canonical	2	15	junction_3	5.14990698460791	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACCCTGTGACCCTTG	NA	False	NA	NA	False	NA	NA	NA	51486230	51042810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.17	chr17	-	4362	1	Intergenic	novelGene_12850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAAAAACTCCCA	NA	False	NA	NA	False	NA	NA	NA	51070319	51065957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51066000_51070300
ES.15411.18	chr17	-	3721	1	Intergenic	novelGene_12852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGATACAGAAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	51102081	51098360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51098400_51102100
ES.15411.19	chr17	-	5616	18	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	-7	2792	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.23505499365732	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTCTCCATCATTTT	NA	False	NA	NA	False	TTTAAA	-40	NA	51486346	51101962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51105603_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.2	chr17	-	5581	23	FSM	ENSMUSG00000023923.11	ENSMUST00000224528.2	4764	23	61	-878	-7	-2	multi-exon	FALSE	canonical	0	0	junction_5	8.62834556027041	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACATCCACTTCTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	51486278	51040153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51102953_51103020_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.20	chr17	-	3804	17	NNC	ENSMUSG00000023923.11	novel	4150	17	NA	NA	-25	-191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	7.58261786917948	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAGCTTCTTACTTGA	NA	False	NA	NA	False	AATAAA	-27	NA	51486221	51104945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450382_51450450_51486127
ES.15411.21	chr17	-	1953	16	NNC	ENSMUSG00000023923.11	novel	2508	14	NA	NA	-145	33909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.80996514432398	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAAACTGATGTGATTT	NA	False	NA	NA	False	AGTAAA	-13	NA	51486525	51146555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51146769_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.22	chr17	-	5322	1	Intergenic	novelGene_12853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGACCACATGGGTTTA	NA	False	NA	NA	False	NA	NA	NA	51290264	51284942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51284900_51290300
ES.15411.23	chr17	-	226	1	Intergenic	novelGene_12854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGCATTATGGAGGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	51372945	51372719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51372700_51372900
ES.15411.24	chr17	-	177	1	Intergenic	novelGene_12855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAATTTAAATC	NA	False	NA	NA	False	NA	NA	NA	51386020	51385843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51385800_51386000
ES.15411.25	chr17	-	2666	1	Intergenic	novelGene_12856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACTACAGGAATGTTA	NA	False	NA	NA	False	NA	NA	NA	51436382	51433716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51433700_51436400
ES.15411.26	chr17	-	2162	1	Intergenic	novelGene_12857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAAGGATGTTC	NA	False	NA	NA	False	NA	NA	NA	51482979	51480817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_51480800_51483000
ES.15411.5	chr17	-	5656	23	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	8.55089285367565	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGGGATCACATCCAC	NA	False	NA	NA	False	AATAAA	-10	NA	51486339	51040161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51303428_51303517_51332101_51332233_51450386_51450450_51486127
ES.15411.6	chr17	-	3299	3	NNC	ENSMUSG00000023923.11	novel	5435	22	NA	NA	242602	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACTGGGATCACATCC	NA	False	NA	NA	False	AATAAA	-8	NA	51049052	51040163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51043273_51048503_51048648_51049006
ES.15411.7	chr17	-	4892	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-161	704	6	176	multi-exon	FALSE	canonical	2	15	junction_3	5.14990698460791	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGTCGGTTCAGTGCC	NA	False	NA	NA	False	AGTAAA	-17	NA	51486357	51040855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.8	chr17	-	4835	23	NNC	ENSMUSG00000023923.11	novel	4764	23	NA	NA	4	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.74817211092071	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTACTGTCGTCTGCT	NA	False	NA	NA	False	AATACA	-26	NA	51486335	51040954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51102953_51103020_51106894_51107224_51120783_51120868_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15411.9	chr17	-	4806	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-176	805	8	75	multi-exon	FALSE	canonical	2	15	junction_3	5.14990698460791	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCCTACTGTCGTCTG	NA	False	NA	NA	False	AATACA	-24	NA	51486372	51040956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ES.15412.1	chr17	+	3095	11	Antisense	novelGene_ENSMUSG00000103216.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCCTCGCCCCCTCCTC	NA	False	NA	NA	False	ATTAAA	-11	NA	52046725	52119361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_52047442_52049673_52049877_52074918_52075073_52082230_52082449_52089641_52090095_52092556_52092671_52110460_52110583_52111341_52111468_52112223_52112401_52116069_52116316_52118795
ES.15412.2	chr17	+	1155	7	Antisense	novelGene_ENSMUSG00000103216.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.372677996249965	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCCTCGCCCCCTCCTC	NA	False	NA	NA	False	ATTAAA	-11	NA	52092642	52119361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_52092671_52110460_52110583_52111341_52111468_52112223_52112401_52116069_52116316_52118795_52119171_52119280
ES.15413.1	chr17	+	5394	1	FSM	ENSMUSG00000103753.2	ENSMUST00000194780.2	1905	1	-1192	-2297	-1192	2297	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGAGTTGGGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	52138654	52144048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_52138700_52144000
ES.15413.2	chr17	+	3644	1	FSM	ENSMUSG00000103753.2	ENSMUST00000194780.2	1905	1	-31	-1708	-31	1708	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTCGGGAGGGAGGCAT	NA	False	NA	NA	False	NA	NA	NA	52139815	52143459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_52139800_52143500
ES.15414.1	chr17	-	5324	12	NIC	ENSMUSG00000023927.16	novel	3748	12	NA	NA	-745	237	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	21.6577434475448	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCAGGGTTTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	52120453	52045684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_52047442_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ES.15414.10	chr17	-	4756	11	NIC	ENSMUSG00000023927.16	novel	5993	11	NA	NA	-628	-115	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	18.0055546984812	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAGAAGCTTCGGTCTC	NA	False	NA	NA	False	TATAAA	-25	NA	52120336	52046036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_52047439_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ES.15414.11	chr17	-	4044	12	NNC	ENSMUSG00000023927.16	novel	5993	11	NA	NA	-639	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	20.4248268956926	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTAGAAGCTTCGGT	NA	False	NA	NA	False	TATAAA	-22	NA	52120347	52046039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795_52119136_52119858
ES.15414.12	chr17	-	4474	12	NNC	ENSMUSG00000023927.16	novel	5993	11	NA	NA	-729	167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	20.4248268956926	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTCATTATTACATGA	NA	False	NA	NA	False	AATAAA	-19	NA	52120437	52046312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795_52119163_52119272
ES.15414.13	chr17	-	3022	11	NIC	ENSMUSG00000023927.16	novel	6243	11	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_10	22.6232181618796	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAGTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	52139747	52046479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_52047439_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
ES.15414.14	chr17	-	991	1	FSM	ENSMUSG00000102973.2	ENSMUST00000194215.2	3156	1	2193	-28	2193	28	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGTCGTAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	52053519	52052528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52052500_52053500
ES.15414.15	chr17	-	2715	1	FSM	ENSMUSG00000102212.2	ENSMUST00000194893.2	4327	1	-1022	2634	-1022	-2634	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACACTTCTTTAATGAA	NA	False	NA	NA	False	NA	NA	NA	52069671	52066956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52067000_52069700
ES.15414.16	chr17	-	1726	1	FSM	ENSMUSG00000023927.16	ENSMUST00000146414.4	3840	1	2129	-15	342	15	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTTTTGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	52115818	52114092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52114100_52115800
ES.15414.2	chr17	-	3826	11	FSM	ENSMUSG00000023927.16	ENSMUST00000144331.8	6243	11	-53	2470	-53	237	multi-exon	FALSE	canonical	3	5	junction_10	18.7245827723877	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCAGGGTTTGTCTGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	52139753	52045684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
ES.15414.3	chr17	-	6578	13	NNC	ENSMUSG00000023927.16	novel	3748	12	NA	NA	-611	236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.4075764991873	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCAGGGTTTGTCTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	52120319	52045685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_52047439_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52112620_52114013_52116070_52116316_52118795
ES.15414.4	chr17	-	3908	12	NNC	ENSMUSG00000023927.16	novel	6243	11	NA	NA	-40	234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	27.1874424099324	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGCAGGGTTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	52139740	52045687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_52047442_52049074_52049171_52049673_52049878_52074919_52075078_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52139497
ES.15414.5	chr17	-	3775	12	NIC	ENSMUSG00000023927.16	novel	3748	12	NA	NA	12	233	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	25.5743931849196	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGGCAGGGTTTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	52140306	52045688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_52047439_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52140190
ES.15414.6	chr17	-	5142	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1661	-810	-663	233	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGGCAGGGTTTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	52120371	52045688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ES.15414.7	chr17	-	4896	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1674	-577	-650	0	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTTGCAATGTGTCT	NA	False	NA	NA	False	AATAGA	-37	NA	52120358	52045921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ES.15414.9	chr17	-	4970	12	NIC	ENSMUSG00000023927.16	novel	3748	12	NA	NA	-635	-7	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	21.6577434475448	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTGATGTTTGCAA	NA	False	NA	NA	False	AATAAA	-39	NA	52120343	52045928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_52047442_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ES.15415.1	chr17	-	171	1	Intergenic	novelGene_12858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATATACAATGAA	NA	False	NA	NA	False	NA	NA	NA	52163797	52163626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_52163600_52163800
ES.15416.1	chr17	+	1408	1	Intergenic	novelGene_12859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	52176825	52178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_52176800_52178200
ES.15417.1	chr17	+	138	1	Intergenic	novelGene_12860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAACAACAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	52185791	52185929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_52185800_52185900
ES.15418.1	chr17	-	210	1	Intergenic	novelGene_12861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTGGCTAAATTCACAC	NA	False	NA	NA	False	AAGAAA	-14	NA	52964516	52964306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_52964300_52964500
ES.15419.1	chr17	+	180	1	Intergenic	novelGene_12862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAAAGGTA	4885	False	NA	NA	False	NA	NA	NA	53633290	53633470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53633300_53633500
ES.1542.1	chr1	+	1299	4	NNC	ENSMUSG00000006007.15	novel	1246	4	NA	NA	8064	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAAGTAGTCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	150203243	150209645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150203392_150204066_150204152_150206476_150206623_150208725
ES.15420.1	chr17	-	595	1	Intergenic	novelGene_12863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAGAGACTATCCAT	7260	False	NA	NA	False	NA	NA	NA	53682068	53681473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53681500_53682100
ES.15421.1	chr17	+	1381	1	Intergenic	novelGene_12864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCCTCCTTACGGGGG	NA	False	NA	NA	False	NA	NA	NA	53700491	53701872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53700500_53701900
ES.15422.1	chr17	+	130	1	Intergenic	novelGene_12866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	53759828	53759958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53759800_53760000
ES.15423.1	chr17	-	4249	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	3	4	intron_retention	TRUE	canonical	1	4	junction_3	9.53895882878158	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGTTTTGCTGTGTG	NA	False	NA	0	True	ATTAAA	-18	NA	53770331	53705912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728926_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.10	chr17	-	3370	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	512	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.9223321519501	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGGACTTAAATTCAT	NA	False	NA	NA	False	NA	NA	NA	53769822	53706176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728898_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53748337_53748385_53752772_53752884_53758578_53758723_53759588_53759652_53769458
ES.15423.11	chr17	-	4036	12	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	-9	260	-9	-1	5prime_fragment	FALSE	canonical	2	16	junction_3	7.09440473277333	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGGACTTAAATTCAT	NA	False	NA	NA	False	NA	NA	NA	53770358	53706176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.12	chr17	-	3377	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2427	-3	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	7.6763024845762	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTCTGGACTTAAATTC	NA	False	NA	NA	False	NA	NA	NA	53772776	53706178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53772533
ES.15423.13	chr17	-	3163	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	5307	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	10.686362669657	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTCTGGACTTAAATT	NA	False	NA	NA	False	NA	NA	NA	53765027	53706179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53764997
ES.15423.15	chr17	-	2914	9	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2353	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	9.97496867163	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTCTGGACTTAAATT	NA	False	NA	NA	False	NA	NA	NA	53772702	53706179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53772533
ES.15423.16	chr17	-	3964	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	9.53895882878158	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATCTTGTTCTGGACT	NA	False	NA	NA	False	NA	NA	NA	53770319	53706185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728926_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.17	chr17	-	3334	9	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2291	-28	intron_retention	FALSE	canonical	0	0	junction_1	14.6799182559032	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAATTAAAAACA	NA	False	NA	NA	False	AAAAAG	-41	NA	53772640	53706203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53708676_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53758578_53758723_53759588_53759652_53772533
ES.15423.18	chr17	-	3545	12	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	478	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.4802056632397	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAATTAAAAACA	NA	False	NA	NA	False	AAAAAG	-41	NA	53769856	53706203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720737_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.19	chr17	-	2080	11	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	436	2278	421	-2019	5prime_fragment	FALSE	canonical	2	16	junction_2	7.44043009509531	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGGATGTCTGTGTT	NA	False	NA	NA	False	AATAAA	-44	NA	53769913	53708194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.2	chr17	-	1914	13	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2324	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.0724088547214	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCCTGGTTTTGCTG	NA	False	NA	-4	True	ATTAAA	-14	NA	53772673	53705916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53706148_53707773_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752768_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53772533
ES.15423.20	chr17	-	4406	1	Intergenic	novelGene_12865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTCTCATTTTCTAGG	NA	False	NA	NA	False	AATAAA	-9	NA	53738446	53734040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53734000_53738400
ES.15423.21	chr17	-	2258	7	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-37	-31007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7235564559949	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53770386	53737182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53737880_53744107_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.22	chr17	-	2452	6	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-4	-41151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9370011121475	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTCTTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	53770353	53747326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53748385_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.23	chr17	-	1066	1	Intergenic	novelGene_12867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	53765449	53764383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53764400_53765400
ES.15423.4	chr17	-	3245	8	NIC	ENSMUSG00000023931.6	novel	3656	9	NA	NA	508	-1	intron_retention	FALSE	canonical	0	0	junction_7	13.7573727914326	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTCCTGGTTTTGCT	NA	False	NA	-5	True	ATTAAA	-13	NA	53769826	53705917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53752772_53752884_53769458
ES.15423.5	chr17	-	3767	12	NIC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	504	-1	intron_retention	FALSE	canonical	2	16	junction_3	7.09440473277333	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGTCCTGGTTTTGCT	NA	False	NA	-5	True	ATTAAA	-13	NA	53769830	53705917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15423.6	chr17	-	3230	9	NNC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	-2408	-2	intron_retention	FALSE	canonical	2	5	junction_8	9.97496867163	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAATGTCCTGGTTTTGC	NA	False	NA	-6	True	ATTAAA	-12	NA	53772757	53705918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53772533
ES.15423.7	chr17	-	3053	8	NNC	ENSMUSG00000023931.6	novel	3656	9	NA	NA	491	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.7700309939778	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATTGTTTCTAGATT	NA	False	NA	NA	False	NA	NA	NA	53769843	53706164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53707956_53708462_53708676_53720490_53720737_53728902_53729058_53733239_53733308_53733937_53734022_53752772_53752884_53769458
ES.15423.8	chr17	-	3638	9	NIC	ENSMUSG00000023931.6	novel	2661	13	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	11.3074919854051	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGACTTAAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	53770346	53706174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53769458
ES.15423.9	chr17	-	2328	8	NNC	ENSMUSG00000023931.6	novel	3656	9	NA	NA	491	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.5349683908307	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGACTTAAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	53769843	53706174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53706965_53737359_53737880_53744107_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ES.15424.1	chr17	+	1552	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-33	25920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	338.151223567208	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATAAAGAAGAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	53786228	53840628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341_53813833_53840599
ES.15424.10	chr17	+	2664	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.698545122912	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786283	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53787599_53787929_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.11	chr17	+	2109	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	28	229	-25	-229	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTGAAGTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	53786289	53814479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.12	chr17	+	2524	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-25	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	421.167721935098	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786289	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790848_53791104_53798803_53798999_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.14	chr17	+	2391	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	414.185948578655	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGAGTTTTCTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	53786295	53814706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790247_53790309_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.15	chr17	+	3586	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	50	-1270	-3	1270	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTATGTGCACATGA	NA	False	NA	NA	False	AATAAA	-21	NA	53786311	53815978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.16	chr17	+	2089	6	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.3029030402	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786317	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786442_53790865_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.17	chr17	+	2178	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	338.151223567208	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786323	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341_53813632_53813748
ES.15424.19	chr17	+	4326	18	Fusion	ENSMUSG00000017831.9_ENSMUSG00000000708.15	novel	455	6	NA	NA	41	0	multi-exon	FALSE	canonical	0	0	junction_1	65.9364798663276	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53786355	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_53786637_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.2	chr17	+	2087	6	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-33	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.3029030402	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786228	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786439_53790953_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.20	chr17	+	2275	6	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	360.606932822984	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGAGTTTTCTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	53786370	53814706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790848_53791104_53804554_53804707_53805395_53805539_53807403_53807498_53813341
ES.15424.21	chr17	+	2268	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	89	25920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	338.151223567208	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATAAAGAAGAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	53786403	53840628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341_53814709_53840584
ES.15424.22	chr17	+	2536	8	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	220	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	447.191051715812	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786534	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53787570_53787962_53790247_53790309_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.23	chr17	+	11093	4	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	14510	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	421.886503958378	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53800824	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53804707_53805415_53805539_53807403_53810415_53810622
ES.15424.24	chr17	+	3960	4	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	16069	0	16016	0	3prime_fragment	FALSE	canonical	3	878	junction_2	42.9444085093999	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53802330	53814708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.25	chr17	+	4933	2	Genic_Genomic	ENSMUSG00000017831.9	novel	2366	6	NA	NA	23250	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACACTGAGTTTTCTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	53809564	53814704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_53810408_53810614
ES.15424.26	chr17	+	148	1	Intergenic	novelGene_12870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAATCATAAA	NA	False	NA	NA	False	AATAAA	-6	NA	53810087	53810235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53810100_53810200
ES.15424.27	chr17	+	156	1	Intergenic	novelGene_12871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATACATAAATAC	NA	False	NA	NA	False	NA	NA	NA	53810419	53810575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53810400_53810600
ES.15424.28	chr17	+	3825	1	Antisense	novelGene_ENSMUSG00000044957.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	53815501	53819326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_53815500_53819300
ES.15424.29	chr17	+	6479	1	Antisense	novelGene_ENSMUSG00000044957.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCACATCAATCGT	NA	False	NA	NA	False	AATACA	-41	NA	53819481	53825960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_53819500_53826000
ES.15424.3	chr17	+	2449	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	-31	-52	-31	52	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGCTGCAGCTTTTGT	NA	False	NA	NA	False	CATAAA	-24	NA	53786230	53814760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.30	chr17	+	1348	1	Intergenic	novelGene_12872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATAGTTGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	53820444	53821792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53820400_53821800
ES.15424.31	chr17	+	168	1	Intergenic	novelGene_12873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	53826478	53826646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53826500_53826600
ES.15424.32	chr17	+	335	1	Intergenic	novelGene_12874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	53836668	53837003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53836700_53837000
ES.15424.33	chr17	+	176	1	Intergenic	novelGene_12875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	53852842	53853018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53852800_53853000
ES.15424.34	chr17	+	171	1	Intergenic	novelGene_12876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	53856423	53856594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53856400_53856600
ES.15424.35	chr17	+	202	1	Intergenic	novelGene_12877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCTCACAAGGAAATAT	NA	False	NA	NA	False	AAGAAA	-8	NA	53865278	53865480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53865300_53865500
ES.15424.36	chr17	+	4743	18	NNC	ENSMUSG00000000708.15	novel	455	6	NA	NA	-8210	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	62.7882143526291	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53865678	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53866377_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.38	chr17	+	4249	16	NNC	ENSMUSG00000000708.15	novel	439	3	NA	NA	-7973	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	86.6470747085876	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53865915	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53866377_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.39	chr17	+	2024	1	Intergenic	novelGene_12878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53865918	53867942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53865900_53867900
ES.15424.4	chr17	+	1557	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	-12	821	-12	-821	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACAGTCTTGCATCT	NA	False	NA	58	True	AATAAA	-9	NA	53786249	53813887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.40	chr17	+	7064	7	NNC	ENSMUSG00000000708.15	novel	439	3	NA	NA	-7590	9016	intron_retention	FALSE	canonical	1	15	junction_1	88.7499608763607	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53866298	53954466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53866377_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220
ES.15424.41	chr17	+	4307	18	NIC	ENSMUSG00000000708.15	novel	455	6	NA	NA	-209	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	65.7253907528847	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53873679	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53873944_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.42	chr17	+	4677	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	-23	-1	-23	1	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTTATGTTTTATT	NA	False	NA	20	True	TTTAAA	-20	NA	53873975	53979749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.43	chr17	+	4519	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	33	101	33	-101	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGCAAATGCTTTAA	NA	False	NA	-82	True	AATAAA	-16	NA	53874031	53979647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.44	chr17	+	4573	19	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	84.2293495958109	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874277	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53940629_53940829_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.49	chr17	+	4219	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	297	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	67.6441747307187	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874295	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.5	chr17	+	2352	6	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-8	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	370.3029030402	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786253	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53786637_53790861_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.50	chr17	+	4528	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	301	-176	301	176	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGTTGCTAGAGAGT	NA	False	NA	NA	False	TATAAA	-28	NA	53874299	53979924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.51	chr17	+	6915	15	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	302	-2	intron_retention	FALSE	canonical	3	180	junction_6	32.5614019655049	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874300	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53967201_53970562_53972745_53972850_53972936_53977702
ES.15424.54	chr17	+	2722	13	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	319	-5	intron_retention	FALSE	canonical	3	180	junction_6	27.5241055965292	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53874317	53970697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53967201_53970562
ES.15424.55	chr17	+	2814	19	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	321	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	64.9502421136156	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874319	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702_53978078_53979595
ES.15424.56	chr17	+	6686	16	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	321	-2	intron_retention	FALSE	canonical	3	180	junction_6	31.4631353950761	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874319	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53967201_53970562_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.57	chr17	+	3439	10	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	322	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	81.2335453423577	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874320	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53977702
ES.15424.59	chr17	+	4208	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	322	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	68.7649983639933	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874320	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.6	chr17	+	2237	5	NIC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	392.207215639896	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786258	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53786637_53790848_53791104_53804554_53804707_53807403_53807498_53813341
ES.15424.60	chr17	+	4075	16	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	322	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	69.3616608797684	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGTTATGTTTTA	NA	False	NA	18	True	AATATA	-44	NA	53874320	53979747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.62	chr17	+	2120	9	ISM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	323	23109	323	11189	5prime_fragment	FALSE	canonical	3	180	junction_6	29.025581389526	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATCTCTTGACTTTTCA	NA	False	NA	NA	False	NA	NA	NA	53874321	53956639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774
ES.15424.64	chr17	+	4931	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	323	1	intron_retention	FALSE	canonical	3	180	junction_6	30.4743103900646	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTTATGTTTTATT	NA	False	NA	20	True	TTTAAA	-20	NA	53874321	53979749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.65	chr17	+	4319	18	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	326	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	63.7246998442693	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874324	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972739_53972850_53972936_53977702
ES.15424.67	chr17	+	6289	16	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	328	-2	intron_retention	FALSE	canonical	3	180	junction_6	31.9141905044693	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874326	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53972745_53972850_53972936_53977702
ES.15424.68	chr17	+	4172	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	335	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	67.6840084510366	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874333	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.7	chr17	+	2112	5	NIC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	398.092011977131	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGAGTTTTCTCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	53786258	53814706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53786637_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.70	chr17	+	1298	8	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	341	3442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	91.7167333896791	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGCAATCTA	NA	False	NA	NA	False	NA	NA	NA	53874339	53948892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53948708
ES.15424.72	chr17	+	4220	18	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	345	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	66.235973249052	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874343	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972878_53977730
ES.15424.73	chr17	+	4293	18	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	347	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	65.8150391412375	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53874345	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972925_53977702
ES.15424.74	chr17	+	3993	20	NNC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	357	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	82.7723909166634	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874355	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702_53978457_53978514_53979146_53979390
ES.15424.75	chr17	+	4013	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	448	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	67.1390523000586	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874446	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.77	chr17	+	189	1	Intergenic	novelGene_12881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCCGGCTTTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	53888708	53888897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_53888700_53888900
ES.15424.78	chr17	+	4356	18	NNC	ENSMUSG00000000708.15	novel	455	6	NA	NA	-1667	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.7253907528847	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53889486	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53889800_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.79	chr17	+	1594	1	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	-12534	-4666	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGGAAAGAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	53939190	53940784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53939200_53940800
ES.15424.8	chr17	+	3633	6	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	16	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	370.3029030402	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACTGAGTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	53786277	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53787929_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15424.81	chr17	+	2827	8	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	-6218	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	97.0352345011536	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGTGTTATGTTTT	NA	False	NA	17	True	AATATA	-43	NA	53960047	53979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53960259_53961466_53961594_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.82	chr17	+	2940	9	ISM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	86049	0	-6218	0	3prime_fragment	FALSE	canonical	3	209	junction_1	29.367286221236	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53960047	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.83	chr17	+	6992	6	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	-3710	0	intron_retention	FALSE	canonical	3	249	junction_2	25.757329054077	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53962555	53979748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ES.15424.84	chr17	+	2179	3	NNC	ENSMUSG00000000708.15	novel	455	6	NA	NA	6255	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	159	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTGTCTGGTGTTA	NA	False	NA	11	True	AATATA	-37	NA	53972677	53979740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_53972745_53972850_53972925_53977702
ES.15424.85	chr17	+	3287	1	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	10038	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGTTATGTTTTA	NA	False	NA	18	True	AATATA	-44	NA	53976460	53979747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53976500_53979700
ES.15424.9	chr17	+	6559	5	NIC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	878	junction_3	37.2625817677734	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786280	53814708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ES.15425.1	chr17	-	288	1	Intergenic	novelGene_12868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	53793627	53793339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53793300_53793600
ES.15425.2	chr17	-	145	1	Intergenic	novelGene_12869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGCGGGCAGGGACTG	NA	False	NA	NA	False	NA	NA	NA	53793629	53793484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53793500_53793600
ES.15426.1	chr17	-	193	1	Intergenic	novelGene_12879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTGGGATGAT	NA	False	NA	NA	False	NA	NA	NA	53869717	53869524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53869500_53869700
ES.15427.1	chr17	-	680	1	Intergenic	novelGene_12880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	53878876	53878196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53878200_53878900
ES.15428.1	chr17	-	713	1	Antisense	novelGene_ENSMUSG00000000708.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGGAGTAACTCAAAC	NA	False	NA	NA	False	NA	NA	NA	53891473	53890760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_53890800_53891500
ES.15429.1	chr17	-	137	1	Intergenic	novelGene_12882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	53967529	53967392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_53967400_53967500
ES.1543.1	chr1	+	7620	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-70	-120	-70	0	multi-exon	TRUE	canonical	3	82	junction_1	100.054291298415	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150268518	150325686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.10	chr1	+	7563	52	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	125.954990954116	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150268562	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293708_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.101	chr1	+	7519	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	23	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	134.648484581149	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTATTGAGTGTTGT	NA	False	NA	NA	False	AATAAA	-42	NA	150269157	150325882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284488_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290422_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.104	chr1	+	8431	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	53	1145	intron_retention	FALSE	canonical	0	0	junction_49	107.728594161439	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAATTGGTCTTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	150269187	150326831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324900_150324990_150325482
ES.1543.107	chr1	+	7064	50	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	1948	8	1814	0	3prime_fragment	FALSE	canonical	3	414	junction_5	74.4962256101214	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150270948	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.109	chr1	+	7030	50	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	1814	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_46	104.29999902166	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150270948	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.11	chr1	+	7767	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-22	-315	-22	195	multi-exon	FALSE	canonical	3	82	junction_1	100.054291298415	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTATTGAGTGTTG	NA	False	NA	NA	False	AATAAA	-41	NA	150268566	150325881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.110	chr1	+	7948	44	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-7992	3	intron_retention	FALSE	canonical	3	414	junction_1	74.7379702484833	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150279755	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.111	chr1	+	6425	44	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	14077	10	-4670	-2	3prime_fragment	FALSE	canonical	3	455	junction_7	70.1021583220243	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150283077	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.112	chr1	+	5155	35	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-4644	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	116.675047070899	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150283103	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288679_150288827_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.114	chr1	+	6177	42	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-3179	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	114.864371823193	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150284568	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316199_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.115	chr1	+	6118	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-2796	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	114.768111315818	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150284951	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298277_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.116	chr1	+	5965	42	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-2793	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.462801206319	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150284954	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150285046_150285730_150285929_150287651_150287760_150288641_150288679_150288827_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.117	chr1	+	4928	30	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	16728	9623	-2019	0	internal_fragment	FALSE	canonical	3	455	junction_3	64.5238666680621	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150285728	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.118	chr1	+	5828	39	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	18648	8	-99	0	3prime_fragment	FALSE	canonical	3	455	junction_2	68.3154093331407	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150287648	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.119	chr1	+	5686	38	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	892	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_34	111.411430918788	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGTTTTCTTCATTT	NA	False	NA	23	True	AATAAA	-22	NA	150288639	150325684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.12	chr1	+	7469	51	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	149.154181972883	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCACTGTTTTCTT	NA	False	NA	18	True	AATAAA	-17	NA	150268578	150325679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283240_150283329_150284494_150284636_150284956_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.120	chr1	+	5653	38	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	948	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	151.355221958229	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150288695	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318936_150318996_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.121	chr1	+	5199	35	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	21414	3	-124	3	3prime_fragment	FALSE	canonical	3	474	junction_1	66.1832937658925	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150290414	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.124	chr1	+	4574	32	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	3256	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	123.641740188148	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150293794	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316293_150317901_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.125	chr1	+	5461	29	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-2086	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	167.598356745147	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCACTGTTTTCTTCAT	NA	False	NA	21	True	AATAAA	-20	NA	150298403	150325682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321837_150321993_150323262_150324695_150324893_150324990_150325482
ES.1543.126	chr1	+	4042	28	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-1614	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	131.416979483515	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150298875	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323268_150323382_150324893_150324990_150325482
ES.1543.127	chr1	+	3777	27	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-1123	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	132.537010572887	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150299366	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309542_150311391_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.13	chr1	+	7520	52	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	126.5424541216	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150268582	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279381_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.130	chr1	+	3808	26	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	30541	3	-948	3	3prime_fragment	FALSE	canonical	3	531	junction_5	56.979491047218	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150299541	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.131	chr1	+	3950	26	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-900	193	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	131.919708914173	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTTGTATTGAGTGT	NA	False	NA	NA	False	AATAAA	-39	NA	150299589	150325879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312474_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.132	chr1	+	3752	25	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-67	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	175.231909828724	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGTAAAACATTT	NA	False	NA	NA	False	AATAAA	-22	NA	150300422	150325862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313242_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.133	chr1	+	4977	24	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	531	junction_4	58.0997772885834	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGTTTTCTTCATTT	NA	False	NA	23	True	AATAAA	-22	NA	150300447	150325684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.134	chr1	+	3467	24	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	32384	8	895	0	3prime_fragment	FALSE	canonical	3	531	junction_3	58.7262722063897	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150301384	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.135	chr1	+	5027	22	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	895	3	intron_retention	FALSE	canonical	3	531	junction_3	49.0117298191356	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150301384	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893
ES.1543.136	chr1	+	2230	13	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	33611	9624	2122	-1	internal_fragment	FALSE	canonical	3	531	junction_2	51.3735637809521	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTGTTTGTTTGGC	NA	False	NA	14	True	AATAAA	-15	NA	150302611	150316062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.137	chr1	+	4434	21	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	2192	-2	intron_retention	FALSE	canonical	3	531	junction_2	61.0946806195106	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150302681	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.138	chr1	+	3196	22	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	34868	8	-1246	0	3prime_fragment	FALSE	canonical	3	531	junction_1	61.1412253157113	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150303868	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.139	chr1	+	3487	10	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-1138	1	intron_retention	FALSE	canonical	0	0	junction_6	199.877987473717	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTTTGTTTGGCTT	NA	False	NA	16	True	AATAAA	-17	NA	150303976	150316064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150304002_150305085_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312445_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.140	chr1	+	1968	11	FSM	ENSMUSG00000006005.19	ENSMUST00000151563.2	1940	11	-32	4	-32	-1	multi-exon	FALSE	canonical	3	575	junction_5	47.5032630458161	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTTGTTTGTTTGGC	NA	False	NA	14	True	AATAAA	-15	NA	150305082	150316062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.142	chr1	+	3232	17	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	1516	0	intron_retention	FALSE	canonical	3	550	junction_8	61.2109250358954	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150307690	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.143	chr1	+	2318	17	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	39567	7	2393	1	3prime_fragment	FALSE	canonical	3	550	junction_8	63.75	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATCACTGTTTTCTT	NA	False	NA	18	True	AATAAA	-17	NA	150308567	150325679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.144	chr1	+	1759	14	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-1612	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	182.491500977427	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150311573	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150320128_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.145	chr1	+	2651	11	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-718	3	intron_retention	FALSE	canonical	3	550	junction_2	66.7203117498712	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150313964	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.146	chr1	+	3667	11	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-586	1145	intron_retention	FALSE	canonical	3	550	junction_2	66.7203117498712	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAATTGGTCTTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	150314096	150326831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.147	chr1	+	4928	1	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-2161	-1107	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAAAGGAA	79	False	NA	NA	False	GGGGCT	-12	NA	150319507	150324435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150319500_150324400
ES.1543.148	chr1	+	5068	2	ISM	ENSMUSG00000006005.19	ENSMUST00000152967.8	3200	11	5812	-5	-1174	3	intron_retention	FALSE	canonical	3	654	junction_1	0	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	1066	False	NA	22	True	AATAAA	-21	NA	150320494	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150321715_150321835
ES.1543.15	chr1	+	2833	19	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-5	33418	-5	-6	5prime_fragment	FALSE	canonical	3	82	junction_1	111.088622724226	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAAAGAATGCTCC	NA	False	NA	NA	False	AATAAA	-20	NA	150268583	150292148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819
ES.1543.16	chr1	+	7421	52	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	163.67371260647	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150268584	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288766_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306911_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312474_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.2	chr1	+	7827	51	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-40	3	intron_retention	FALSE	canonical	3	82	junction_1	101.049841167614	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150268548	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.20	chr1	+	6425	42	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	155.410637953308	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150268607	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279452_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289571_150290178_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.21	chr1	+	7594	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	-114	0	-114	0	multi-exon	FALSE	canonical	3	414	junction_6	73.7537117710017	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150268886	150325686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.22	chr1	+	6368	41	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	10	9620	10	0	5prime_fragment	FALSE	canonical	3	414	junction_6	68.8321826982117	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269010	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.23	chr1	+	7409	51	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	29	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_47	103.286506379101	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269029	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.24	chr1	+	7364	50	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	135.43444218494	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150269029	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319008_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.27	chr1	+	3623	18	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	35	32638	35	894	5prime_fragment	FALSE	canonical	3	414	junction_6	51.6480637715441	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACGTTATTTTAAT	NA	False	NA	-91	True	AATACA	-5	NA	150269035	150293048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819
ES.1543.3	chr1	+	6485	42	ISM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	-37	9500	-37	0	5prime_fragment	FALSE	canonical	3	82	junction_1	100.513926275774	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150268551	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.30	chr1	+	6582	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	41	0	intron_retention	FALSE	non_canonical	0	0	junction_17	160.550223839769	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150269041	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150290675_150290816_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312467_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.31	chr1	+	6330	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_21	107.360560728789	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269042	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295749_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.32	chr1	+	6602	40	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	46	10140	46	-517	5prime_fragment	FALSE	canonical	3	414	junction_6	66.6929238232958	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGATGGTCTGTGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	150269046	150315546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832
ES.1543.38	chr1	+	8580	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	51	-1151	51	1151	multi-exon	FALSE	canonical	3	414	junction_6	73.7537117710017	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGTCTTAGTTATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	150269051	150326837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.39	chr1	+	8034	50	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	51	3	intron_retention	FALSE	canonical	3	414	junction_6	74.2972070051292	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269051	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.4	chr1	+	6474	42	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	131.571958448034	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150268552	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290173_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.42	chr1	+	7400	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	52	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	109.17583798625	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTTTTCTTCATTTC	NA	False	NA	24	True	AATAAA	-23	NA	150269052	150325685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285757_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.45	chr1	+	7421	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.193911918202	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150269053	150325686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290422_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.46	chr1	+	7408	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	109.194036467199	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150269053	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321629_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.48	chr1	+	7620	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	53	-193	53	193	multi-exon	FALSE	canonical	3	414	junction_6	73.7537117710017	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTTGTATTGAGTGT	NA	False	NA	NA	False	AATAAA	-39	NA	150269053	150325879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.49	chr1	+	6131	39	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.595589115044	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269053	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150277996_150278164_150279711_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.50	chr1	+	6313	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_37	133.885389419458	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269053	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295749_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312474_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.54	chr1	+	7684	50	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	56	3	intron_retention	FALSE	canonical	0	0	junction_37	108.271201439831	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269056	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312445_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.56	chr1	+	7415	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_21	105.814849619512	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150269059	150325686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295749_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.57	chr1	+	7738	49	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	61	3	intron_retention	FALSE	canonical	3	414	junction_6	75.2211554166926	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269061	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.61	chr1	+	7440	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	152.800168848074	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150269070	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150318996_150320128_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150323893_150324047_150324893_150324990_150325482
ES.1543.67	chr1	+	6291	41	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.400558234687	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTTGTTTGTTTGGCT	NA	False	NA	15	True	AATAAA	-16	NA	150269106	150316063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270927_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.68	chr1	+	7289	52	NNC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	133.367198698111	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150269106	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287650_150287760_150288641_150288679_150288756_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.7	chr1	+	7541	52	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-33	3	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	122.110207311753	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150268555	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.72	chr1	+	8883	50	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-28	3	intron_retention	FALSE	canonical	3	414	junction_6	72.640563015797	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269106	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150324990_150325482
ES.1543.75	chr1	+	4971	28	ISM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	108	23228	-26	-1646	5prime_fragment	FALSE	canonical	3	414	junction_6	56.7915834487584	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTGTGTCTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	150269108	150302458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387
ES.1543.77	chr1	+	7241	50	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-25	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	130.643271187379	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150269109	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.81	chr1	+	8502	50	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-14	-2	intron_retention	FALSE	non_canonical	0	0	junction_42	110.049998102979	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGTATCACTGTTTT	NA	False	NA	15	True	AATAAA	-14	NA	150269120	150325676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318932_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.84	chr1	+	7712	49	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-8	3	intron_retention	FALSE	canonical	3	414	junction_6	74.3840330648991	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269126	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.87	chr1	+	6164	40	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	112.093355945276	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTTTGTTTGGCTT	NA	False	NA	16	True	AATAAA	-17	NA	150269131	150316064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.88	chr1	+	7167	50	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	108.892593111985	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150269131	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315014_150316217_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.89	chr1	+	6240	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	111.449304618737	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150269132	150316066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309434_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.9	chr1	+	6335	41	NIC	ENSMUSG00000006005.19	novel	7430	52	NA	NA	-33	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	132.525129692447	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTTTGTTTGGCTT	NA	False	NA	16	True	AATAAA	-17	NA	150268555	150316064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.90	chr1	+	7344	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.721891079948	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACTGTTTTCTTCATT	NA	False	NA	22	True	AATAAA	-21	NA	150269134	150325683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279447_150279618_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.94	chr1	+	7329	51	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_37	106.662025107346	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATCACTGTTTTCT	NA	False	NA	17	True	AATAAA	-16	NA	150269137	150325678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312474_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.1543.96	chr1	+	6084	41	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	138.216494583678	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGTTTGTTTGGCTT	NA	False	NA	16	True	AATAAA	-17	NA	150269142	150316064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298929_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309585_150311494_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ES.1543.97	chr1	+	8657	49	NNC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_36	109.267161123551	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGTTTTCTTCATTT	NA	False	NA	23	True	AATAAA	-22	NA	150269146	150325684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312445_150312618_150313153_150313238_150314832_150315028_150315817_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ES.15430.1	chr17	-	4101	11	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-8344	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.85538635248	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCGCTTACTTTTTAC	NA	False	NA	3	True	AATAAA	-33	NA	54004705	53981810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238_53996450_53996943_53997053_54004432
ES.15430.10	chr17	-	3757	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	34	-8	intron_retention	FALSE	canonical	3	16	junction_7	158.692360578959	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATAGTCAGTTGCCGC	NA	False	NA	-8	True	AATAAA	-22	NA	53996272	53981821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996207
ES.15430.11	chr17	-	4698	7	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	-9	intron_retention	FALSE	canonical	3	11	junction_1	165.933135797391	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACATAGTCAGTTGCCG	NA	False	NA	-9	True	AATAAA	-21	NA	53996306	53981822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53986678_53986730_53988472_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.12	chr17	-	5382	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	2	-10	intron_retention	FALSE	canonical	3	305	junction_6	54.9823719431037	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACATAGTCAGTTGCC	NA	False	NA	-10	True	AATAAA	-20	NA	53996312	53981823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.13	chr17	-	3395	10	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	146.405407037707	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGACATAGTCAGTTGCC	NA	False	NA	-10	True	AATAAA	-20	NA	53996373	53981823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986444_53986678_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.14	chr17	-	3658	10	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-9	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	184.65764117535	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACATAGTCAGTTGC	NA	False	NA	-11	True	AATAAA	-19	NA	53996323	53981824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53986964_53987044_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.15	chr17	-	7037	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-15	-12	intron_retention	FALSE	canonical	3	305	junction_6	58.1124876811327	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGACATAGTCAGTTG	NA	False	NA	-12	True	AATAAA	-18	NA	53996329	53981825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.16	chr17	-	2891	9	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.680072919414	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAGACATAGTCAGT	NA	False	NA	-14	True	AATAAA	-16	NA	53996312	53981827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986056_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.17	chr17	-	3683	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	6	-15	intron_retention	FALSE	canonical	3	426	junction_1	23.6669061978872	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGAGACATAGTCAG	NA	False	NA	-15	True	AATAAA	-15	NA	53996300	53981828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53995149_53996238
ES.15430.18	chr17	-	3570	9	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-13	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.234754108794	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGAGACATAGTCAG	NA	False	NA	-15	True	AATAAA	-15	NA	53996327	53981828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996247
ES.15430.19	chr17	-	4372	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-2	-1268	intron_retention	FALSE	canonical	3	305	junction_6	57.9901469463317	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	-3	True	AATAAA	-24	NA	53996308	53983081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.2	chr17	-	3541	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGCCGCTTACTTTT	NA	False	NA	0	True	AATAAA	-30	NA	53996405	53981813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
ES.15430.20	chr17	-	3022	3	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	6647	-1268	intron_retention	FALSE	canonical	3	483	junction_1	2.5	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	993	False	NA	-3	True	AATAAA	-24	NA	53989659	53983081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472
ES.15430.21	chr17	-	4608	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	-2249	1269	-2249	-1269	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATGTGTGTATGTAT	NA	False	NA	-4	True	AATAAA	-23	NA	53998610	53983082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.22	chr17	-	2193	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-13	-1270	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996327	53983083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
ES.15430.23	chr17	-	3539	4	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	2937	-1270	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	215.643223867573	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53993369	53983083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53986678_53986730_53988472_53988517_53990581
ES.15430.24	chr17	-	2553	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	-1270	intron_retention	FALSE	canonical	3	305	junction_6	57.9690276204915	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996361	53983083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.25	chr17	-	2355	9	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-13	-1270	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	149.294538999255	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996327	53983083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996207
ES.15430.26	chr17	-	6019	7	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-13	-1270	intron_retention	FALSE	canonical	3	305	junction_5	62.5906009983395	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTATGTGTGTATGTA	NA	False	NA	-5	True	AATAAA	-22	NA	53996374	53983083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.27	chr17	-	4246	7	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	1	-1272	intron_retention	FALSE	canonical	3	305	junction_5	58.5797177642	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTATGTGTGTATG	NA	False	NA	-7	True	AATAAA	-20	NA	53996313	53983085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.28	chr17	-	1393	8	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-15	-1272	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	156.691559753419	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTTATGTGTGTATG	NA	False	NA	-7	True	AATAAA	-20	NA	53996329	53983085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53986678_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.29	chr17	-	4331	11	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-2771	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	181.19682668303	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATCTTTATGTGT	NA	False	NA	-12	True	AATAAA	-15	NA	53999132	53983090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238_53996450_53996943_53997053_53997349
ES.15430.3	chr17	-	3498	10	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.405407037707	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	NA	False	NA	-1	True	AATAAA	-29	NA	53996303	53981814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53982528_53982598_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.30	chr17	-	2296	9	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	2	-1277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	154.320638201765	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATCTTTATGTGT	NA	False	NA	-12	True	AATAAA	-15	NA	53996312	53983090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990653_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.31	chr17	-	4117	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-23	-1277	intron_retention	FALSE	canonical	3	305	junction_6	54.2481072744215	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATCTTTATGTGT	NA	False	NA	-12	True	AATAAA	-15	NA	53996384	53983090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.32	chr17	-	4142	5	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-1	-1278	intron_retention	FALSE	canonical	3	434	junction_4	23.2096423927643	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGAATCTTTATGTG	NA	False	NA	-13	True	AATAAA	-14	NA	53996307	53983091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111
ES.15430.33	chr17	-	3052	12	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-8315	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	199.798658985068	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGAATCTTTATGTG	NA	False	NA	-13	True	AATAAA	-14	NA	54004676	53983091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238_53996450_53996943_53997053_53997349_53997611_54004432
ES.15430.34	chr17	-	4103	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	4	-1279	intron_retention	FALSE	canonical	3	305	junction_6	54.9823719431037	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGAATCTTTATGT	NA	False	NA	-14	True	AATAAA	-13	NA	53996302	53983092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.35	chr17	-	3078	12	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-8322	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	199.510475294071	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATTGAATCTTTATG	NA	False	NA	-15	True	AATAAA	-12	NA	54004683	53983093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238_53996450_53996943_53997053_53997349_53997632_54004432
ES.15430.36	chr17	-	2878	7	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-1	-1321	intron_retention	FALSE	canonical	3	305	junction_5	60.6657509088393	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCTTTGATATGTGA	NA	False	NA	-56	True	AATAAA	-17	NA	53996307	53983134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994887_53995017_53995149_53996238
ES.15430.37	chr17	-	2393	4	ISM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	42	10462	-5	2312	5prime_fragment	FALSE	canonical	3	305	junction_2	72.0755776174488	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGTGTTCATAGCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	53996319	53992275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.4	chr17	-	4386	2	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	8293	-1	intron_retention	FALSE	canonical	3	483	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	2639	False	NA	-1	True	AATAAA	-29	NA	53988013	53981814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937
ES.15430.5	chr17	-	3603	9	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	149.294538999255	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	NA	False	NA	-1	True	AATAAA	-29	NA	53996306	53981814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996207
ES.15430.6	chr17	-	5590	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	47	-1	intron_retention	FALSE	canonical	3	305	junction_6	57.9901469463317	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTTGCCGCTTACTTT	NA	False	NA	-1	True	AATAAA	-29	NA	53996259	53981814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.7	chr17	-	2661	8	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	156.691559753419	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTTGCCGCTTACTT	NA	False	NA	-2	True	AATAAA	-28	NA	53996327	53981815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_53983740_53986678_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.8	chr17	-	3533	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	11	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	162.944337559969	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATAGTCAGTTGCCGCT	NA	False	NA	-7	True	AATAAA	-23	NA	53996350	53981820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15430.9	chr17	-	3763	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	305	junction_6	57.9690276204915	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATAGTCAGTTGCCGCT	NA	False	NA	-7	True	AATAAA	-23	NA	53996308	53981820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ES.15431.1	chr17	+	168	1	Intergenic	novelGene_12883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAGGACCTTTG	NA	False	NA	NA	False	NA	NA	NA	54011509	54011677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_54011500_54011700
ES.15432.1	chr17	+	183	1	Intergenic	novelGene_12884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGACCTTTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	54051891	54052074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_54051900_54052100
ES.15433.1	chr17	-	307	1	FSM	ENSMUSG00000021631.9	ENSMUST00000061311.9	306	1	297	-298	297	298	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	54173751	54173444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_54173400_54173800
ES.15434.1	chr17	-	201	1	Intergenic	novelGene_12885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAATCCATGTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	54833866	54833665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_54833700_54833900
ES.15435.1	chr17	-	170	1	Intergenic	novelGene_12886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATACCCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	55145148	55144978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_55145000_55145100
ES.15436.1	chr17	+	168	1	Intergenic	novelGene_12887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	56002405	56002573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56002400_56002600
ES.15437.1	chr17	-	1180	2	NNC	ENSMUSG00000024174.10	novel	3582	17	NA	NA	60172	760	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTTGTTTTATTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	55959406	55958190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_55958751_55958786
ES.15437.2	chr17	-	4291	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	-9	-759	-9	759	multi-exon	FALSE	canonical	1	2	junction_7	6.91804705101086	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTGTTTTATTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	56019587	55958191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ES.15437.3	chr17	-	2260	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	-28	1291	1	-1291	multi-exon	FALSE	canonical	1	2	junction_7	6.91804705101086	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTTGTGAATATGTTG	NA	False	NA	NA	False	NA	NA	NA	56019606	55960241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ES.15437.4	chr17	-	527	5	FSM	ENSMUSG00000024174.10	ENSMUST00000233301.2	1813	5	29	1257	8	-1257	multi-exon	FALSE	canonical	3	16	junction_3	2.54950975679639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGTGTCAGGCATCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	56019599	56005350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ES.15438.1	chr17	-	2064	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-44	-2	-44	2	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCTTGGATAGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	56185974	56171889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ES.15438.2	chr17	-	2169	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	293	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCATTCTCTTGGATA	NA	False	NA	NA	False	AATAAA	-14	NA	56185637	56171893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185413
ES.15438.3	chr17	-	3363	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	293	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTCATTCTCTTGGAT	NA	False	NA	NA	False	AATAAA	-13	NA	56185637	56171894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56184218
ES.15438.4	chr17	-	1854	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	22	142	22	-142	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACATTTATGTTGTC	NA	False	NA	NA	False	AATACA	-38	NA	56185908	56172033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ES.15438.5	chr17	-	1775	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-36	279	-36	-279	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGCTCTCTCACTAGTG	NA	False	NA	NA	False	NA	NA	NA	56185966	56172170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ES.15438.6	chr17	-	2946	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	293	-420	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTTTGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	56185637	56172311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56184218
ES.15438.7	chr17	-	1502	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	317	-645	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	9.67241208569794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTTGCATATAGCAG	NA	False	NA	NA	False	NA	NA	NA	56185613	56172536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185413
ES.15438.8	chr17	-	571	4	NNC	ENSMUSG00000057835.8	novel	2018	4	NA	NA	260	-1543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.4412301024373	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCCTGGTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	56185670	56173434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56173651_56175302_56175364_56175558_56175686_56185503
ES.15438.9	chr17	-	1861	3	ISM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	-42	1851	-42	-1851	5prime_fragment	FALSE	canonical	3	17	junction_2	6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGAATCTCTAAATAC	NA	False	NA	NA	False	NA	NA	NA	56185972	56173742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56175364_56175558_56175686_56185859
ES.15439.1	chr17	+	2071	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	-43	0	-16	0	multi-exon	FALSE	canonical	3	9	junction_1	17.3781471969828	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199076	56205928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
ES.15439.2	chr17	+	2147	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	11	-1263	11	0	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199103	56205928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
ES.15439.3	chr17	+	7845	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	11	-6961	11	5698	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGTGTCTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	56199103	56211626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
ES.15439.4	chr17	+	2991	3	ISM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	-9	0	-9	0	intron_retention	FALSE	canonical	3	9	junction_1	21	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199110	56205928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56199187_56202820_56202948_56203140
ES.15439.5	chr17	+	2321	5	NNC	ENSMUSG00000003198.11	novel	705	4	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	13.1624465810882	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199375	56205928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56199633_56199757_56199861_56202820_56202948_56203140_56203202_56204155
ES.15439.6	chr17	+	5364	3	ISM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	302	-4	-46	4	3prime_fragment	FALSE	canonical	3	36	junction_2	7.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	56199421	56205932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56202948_56203140_56203202_56204155
ES.1544.1	chr1	-	3655	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	353	-735	-8	735	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGAGAGCATGAGCTTAT	986	False	NA	NA	False	ATTAAA	-18	NA	150268478	150236320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.10	chr1	-	2849	13	FSM	ENSMUSG00000006010.15	ENSMUST00000097546.9	3174	13	326	-1	-10	1	multi-exon	FALSE	canonical	1	1	junction_5	38.8639900450561	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAATGTGGAATTTTAA	984	False	NA	NA	False	AATAAA	-14	NA	150268480	150237062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.11	chr1	-	5878	11	NIC	ENSMUSG00000006010.15	novel	2851	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	32	junction_9	33.529837458598	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	638	False	NA	NA	False	AATAAA	-13	NA	150268826	150237063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.12	chr1	-	5374	12	NNC	ENSMUSG00000006010.15	novel	2851	13	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_6	57.0474646512927	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	963	False	NA	NA	False	AATAAA	-13	NA	150268501	150237063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150256642_150259394_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.13	chr1	-	2682	12	NNC	ENSMUSG00000006010.15	novel	2851	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.0871656458656	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	976	False	NA	NA	False	AATAAA	-13	NA	150268488	150237063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150258808_150258843_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.14	chr1	-	3821	13	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	21	0	intron_retention	FALSE	canonical	3	106	junction_8	13.8691804612481	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	679	False	NA	NA	False	AATAAA	-13	NA	150268785	150237063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.15	chr1	-	2787	13	NIC	ENSMUSG00000006010.15	novel	2851	13	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	44.7309084042194	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATTAATGTGGAATTTT	976	False	NA	NA	False	AATAAA	-12	NA	150268488	150237064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.16	chr1	-	2789	12	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	40.0668862266689	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACATTAATGTGGAATTT	963	False	NA	NA	False	AATAAA	-11	NA	150268501	150237065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.17	chr1	-	2215	11	NNC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-2015	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.3885249797574	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACATTAATGTGGAATTT	9224	False	NA	NA	False	AATAAA	-11	NA	150260240	150237065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_150238186_150238444_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179
ES.1544.18	chr1	-	1670	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	964	False	NA	NA	False	NA	NA	NA	150268500	150238289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.19	chr1	-	1969	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	-4	1308	-4	-79	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGCATGTAACAAATCAC	629	False	NA	NA	False	AGTAAA	-17	NA	150268835	150238363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.2	chr1	-	3026	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	31.3627374725987	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGGAATTTTAAAATAG	964	False	NA	NA	False	AATAAA	-19	NA	150268500	150237057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268354
ES.1544.20	chr1	-	2046	7	NIC	ENSMUSG00000006010.15	novel	2851	13	NA	NA	6	4068	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	52.588813766174	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTGCATTTATGCTT	976	False	NA	NA	False	AATAAA	-15	NA	150268488	150246486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150247951_150250545_150250637_150251246_150251376_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.21	chr1	-	3525	5	FSM	ENSMUSG00000006010.15	ENSMUST00000150615.8	665	5	-328	-2532	4	2532	multi-exon	FALSE	canonical	3	115	junction_4	16.140012391569	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTGTGTTTTAATTTA	637	False	NA	NA	False	ATTAAA	-23	NA	150268827	150257500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.22	chr1	-	157	1	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATTTAAAAA	2981	False	NA	NA	False	NA	NA	NA	150266483	150266326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_150266300_150266500
ES.1544.4	chr1	-	3269	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	2	2	2	-2	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGGAATTTTAAAATAG	635	False	NA	NA	False	AATAAA	-19	NA	150268829	150237057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.5	chr1	-	2834	15	NNC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.8657935584449	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGGAATTTTAAAATAG	980	False	NA	NA	False	AATAAA	-19	NA	150268484	150237057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_150238419_150238508_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.6	chr1	-	2949	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_13	39.3046062314065	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGGAATTTTAAAATAG	1003	False	NA	NA	False	AATAAA	-19	NA	150268461	150237057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268354
ES.1544.7	chr1	-	2876	13	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	39.5013185433938	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	987	False	NA	NA	False	AATAAA	-15	NA	150268477	150237061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ES.1544.8	chr1	-	3216	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	646	False	NA	NA	False	AATAAA	-15	NA	150268818	150237061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.1544.9	chr1	-	4871	12	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	4	2	intron_retention	FALSE	canonical	3	32	junction_10	32.08588680762	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATGTGGAATTTTAAA	974	False	NA	NA	False	AATAAA	-15	NA	150268490	150237061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
ES.15440.1	chr17	+	173	1	Intergenic	novelGene_12889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	5123	False	NA	NA	False	NA	NA	NA	56230320	56230493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56230300_56230500
ES.15441.1	chr17	-	712	5	Intergenic	novelGene_12888	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.707106781186548	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCTCTCAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	56239167	56212635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56212981_56213124_56213239_56213311_56213401_56217565_56217675_56239112
ES.15442.1	chr17	-	1918	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	-25	-4	-25	4	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTATGTTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	56252284	56245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
ES.15442.2	chr17	-	2832	3	NIC	ENSMUSG00000062101.13	novel	1889	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	31	junction_2	6.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	56252267	56245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56247990_56248185_56248313_56252171
ES.15443.1	chr17	+	3089	1	Genic_Genomic	ENSMUSG00000003206.8	novel	NA	NA	NA	NA	2722	1428	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5542	False	NA	NA	False	NA	NA	NA	56262361	56265450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_56262400_56265400
ES.15444.1	chr17	+	1411	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-87	336	-12	-332	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTCGTGCTGTTTAA	257	False	NA	11	True	AATACA	-27	NA	56266086	56274949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ES.15444.2	chr17	+	1736	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	-65	-11	10	11	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGCTTTCCCCTGGGG	279	False	NA	19	True	NA	NA	NA	56266108	56275296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ES.15444.3	chr17	+	1580	7	FSM	ENSMUSG00000003208.10	ENSMUST00000233661.2	1601	7	22	-1	22	1	multi-exon	FALSE	canonical	0	0	junction_6	54.397967690796	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCGTGTTGGAGTCT	291	False	NA	5	True	NA	NA	NA	56266120	56275282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56274527
ES.15444.4	chr17	+	3761	1	FSM	ENSMUSG00000003208.10	ENSMUST00000233204.2	3557	1	-7	-197	-7	197	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGCTTGAGGAAGTTAC	335	False	NA	NA	False	ATTAAA	-11	NA	56266164	56269925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56266200_56269900
ES.15444.5	chr17	+	7140	12	Fusion	ENSMUSG00000039154.9_ENSMUSG00000003208.10	novel	1660	8	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_9	68.329778849971	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATTCCCTACTGTTCT	338	False	NA	NA	False	NA	NA	NA	56266167	56283623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527_56279894_56279976_56280154_56280887_56280997_56281233_56281354_56283163
ES.15444.6	chr17	+	2769	7	NIC	ENSMUSG00000003208.10	novel	1660	8	NA	NA	1	-339	intron_retention	FALSE	canonical	3	126	junction_4	9.04924797366549	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATGCAACACAGTCGTGC	343	False	NA	4	True	AATACA	-20	NA	56266172	56274942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ES.15444.7	chr17	+	7427	11	Fusion	ENSMUSG00000039154.9_ENSMUSG00000003208.10	novel	1660	8	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_7	69.5683836235973	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAACCCTTGTCATTCC	343	False	NA	NA	False	NA	NA	NA	56266172	56283613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56277700_56278370_56280154_56280887_56280997_56281233_56281354_56283163
ES.15444.8	chr17	+	3135	4	NIC	ENSMUSG00000003208.10	novel	1660	8	NA	NA	3595	1	intron_retention	FALSE	canonical	3	137	junction_2	3.39934634239519	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCGTGTTGGAGTCT	3989	False	NA	5	True	NA	NA	NA	56269818	56275282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56271265_56271485_56272290_56273507_56273638_56274527
ES.15445.1	chr17	-	638	1	Genic_Genomic	ENSMUSG00000097077.2	novel	NA	NA	NA	NA	-22	-3995	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTTCTTAAGTTTCT	4853	False	NA	NA	False	NA	NA	NA	56266403	56265765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_56265800_56266400
ES.15445.2	chr17	-	347	1	NIC	ENSMUSG00000097077.2	novel	1960	3	NA	NA	26	-4238	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGTGCGCTTATC	4901	False	NA	NA	False	AATAAA	-16	NA	56266355	56266008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56266000_56266400
ES.15446.1	chr17	-	2210	1	Antisense	novelGene_ENSMUSG00000003208.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGGCCAGATCTGCTGC	1368	False	NA	NA	False	NA	NA	NA	56275393	56273183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56273200_56275400
ES.15447.1	chr17	+	3512	10	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	53	junction_3	6.22618921160973	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTGCACTGGTTC	3898	False	NA	4	True	AATAAA	-14	NA	56293475	56303879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297541_56298166_56298377_56300842_56302517_56302857_56302938_56303071_56303324_56303420
ES.15447.2	chr17	+	1967	12	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-30	3	intron_retention	FALSE	canonical	3	52	junction_11	6.33891301264012	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCACTGGTTCTTGAG	3901	False	NA	9	True	AATAAA	-19	NA	56293478	56303884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ES.15447.3	chr17	+	3193	12	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	52	junction_11	6.33891301264012	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTGCACTGGTTC	3901	False	NA	4	True	AATAAA	-14	NA	56293478	56303879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ES.15447.4	chr17	+	3328	11	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-29	0	intron_retention	FALSE	canonical	3	52	junction_10	5.76194411635517	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3902	False	NA	6	True	AATAAA	-16	NA	56293479	56303881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56302517_56302857_56303324_56303420_56303510_56303641
ES.15447.5	chr17	+	1724	13	NNC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	17.4523159876657	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3922	False	NA	6	True	AATAAA	-16	NA	56293499	56303881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303455_56303510_56303641
ES.15447.6	chr17	+	1742	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	0	6	0	-5	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTCCCTCCTGCACTG	3933	False	NA	0	True	AATAAA	-10	NA	56293510	56303875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ES.15447.7	chr17	+	1724	12	NIC	ENSMUSG00000011589.10	novel	1748	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.7038688710064	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3934	False	NA	6	True	AATAAA	-16	NA	56293511	56303881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ES.15448.1	chr17	+	1760	13	NIC	ENSMUSG00000003199.17	novel	1379	12	NA	NA	-20	-9	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	262.477406435085	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	8343	False	NA	137	True	NA	NA	NA	56312690	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56312815_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.10	chr17	+	1720	13	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	8	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	258.841918724323	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316215	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323352
ES.15448.11	chr17	+	1696	13	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	258.841918724323	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316215	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56323002_56323501
ES.15448.12	chr17	+	1657	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	9	11	intron_retention	FALSE	canonical	3	665	junction_1	101.996758982701	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCCTGTGGCTGGGGTG	NA	False	NA	20	True	AATAAA	-20	NA	56316216	56323664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.13	chr17	+	1461	11	NNC	ENSMUSG00000003199.17	novel	1444	12	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	278.594059520299	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316216	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322957_56322997_56323515
ES.15448.14	chr17	+	1582	13	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	9	13	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	260.87827088936	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTGGCTGGGGTGGG	NA	False	NA	22	True	AATAAA	-22	NA	56316216	56323666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316308_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.15	chr17	+	1570	13	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-10	8	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	266.017960964209	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316220	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317258_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.16	chr17	+	1288	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-3	8	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316227	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.17	chr17	+	2427	11	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	830	junction_3	65.4189574970436	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316228	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.18	chr17	+	2406	11	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	0	-34	intron_retention	FALSE	canonical	0	0	junction_2	290.196554080161	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGATATTTAATACTTT	NA	False	NA	112	True	AATGAA	-22	NA	56316230	56323756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56317521_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.19	chr17	+	1123	9	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	322.709984932292	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316231	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317276_56317352_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.2	chr17	+	1398	12	NIC	ENSMUSG00000003199.17	novel	866	8	NA	NA	-5	38	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	273.863964541486	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTGGGGTTTTTTCGG	8358	False	NA	47	True	NA	NA	NA	56312705	56323691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56312815_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.21	chr17	+	1607	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	5	6	intron_retention	FALSE	canonical	3	665	junction_1	102.378167868928	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACAAGCCTGTGGCTG	NA	False	NA	15	True	AATAAA	-15	NA	56316235	56323659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.22	chr17	+	1399	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316236	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.23	chr17	+	2291	11	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-10	8	intron_retention	FALSE	canonical	3	830	junction_3	65.4189574970436	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316244	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.24	chr17	+	1553	12	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	92	129	38	8	3prime_fragment	FALSE	canonical	3	800	junction_1	72.3614663904886	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316292	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.25	chr17	+	2876	8	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	890	junction_2	50.6782568197221	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316325	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56317514_56317987_56318112_56318617_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.26	chr17	+	1592	11	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	-7	8	intron_retention	FALSE	canonical	3	800	junction_1	75.3230376445348	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316325	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.27	chr17	+	1593	12	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	167	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	274.131807592414	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316499	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318740_56318778_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.28	chr17	+	1154	11	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	37	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	285.98034897524	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTAGGAGTAC	NA	False	NA	136	True	NA	NA	NA	56317476	56323780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322231_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.3	chr17	+	201	1	Intergenic	novelGene_12891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGATT	NA	False	NA	NA	False	NA	NA	NA	56315044	56315245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56315000_56315200
ES.15448.4	chr17	+	2338	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	-637	0	-637	0	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	False	NA	146	True	TTTAAA	-7	NA	56315563	56323790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.5	chr17	+	1612	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	-12	101	-12	36	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTGTTGGGGTTTTTTC	NA	False	NA	45	True	AATAAA	-45	NA	56316188	56323689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.7	chr17	+	1757	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	0	-9	intron_retention	FALSE	canonical	3	665	junction_1	102.378167868928	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	False	NA	137	True	NA	NA	NA	56316207	56323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15448.9	chr17	+	1566	13	NNC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	6	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	265.749359777634	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCCTGTGGCTGGG	NA	False	NA	17	True	AATAAA	-17	NA	56316213	56323661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56316257_56316329_56316587_56317276_56317521_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ES.15449.1	chr17	-	1731	14	NNC	ENSMUSG00000038781.8	novel	1509	13	NA	NA	-2811	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.3981208873794	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCATGTGGCTGTAG	NA	False	NA	-8	True	NA	NA	NA	56315395	56304080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429_56312695_56315279
ES.15449.2	chr17	-	1081	6	ISM	ENSMUSG00000038781.8	ENSMUST00000233494.2	1597	12	5302	-1	-1791	1	3prime_fragment	FALSE	canonical	3	21	junction_5	4.54312667664022	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCATGTGGCTGTAG	NA	False	NA	-8	True	NA	NA	NA	56307271	56304080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56307016_56307086
ES.15449.3	chr17	-	783	5	NIC	ENSMUSG00000038781.8	novel	1597	12	NA	NA	-1766	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	10.8972473588517	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCATGTGGCTGTAG	NA	False	NA	-8	True	NA	NA	NA	56307246	56304080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56307086
ES.15449.5	chr17	-	1952	10	NIC	ENSMUSG00000038781.8	novel	1597	12	NA	NA	2	0	intron_retention	FALSE	canonical	1	4	junction_6	11.9536140513607	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCCATGTGGCTGTA	NA	False	NA	-9	True	NA	NA	NA	56312571	56304081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56307157_56307479_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
ES.15449.6	chr17	-	155	1	Intergenic	novelGene_12890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATCACTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	56313811	56313656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56313700_56313800
ES.1545.1	chr1	-	7179	1	Antisense	novelGene_ENSMUSG00000006005.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAGGTTAATAGTAA	NA	False	NA	NA	False	NA	NA	NA	150312600	150305421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_150305400_150312600
ES.1545.2	chr1	-	1404	5	Antisense	novelGene_ENSMUSG00000006005.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACAGTATTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	150312600	150307639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_150308366_150308567_150308632_150309428_150309636_150311391_150311666_150312467
ES.15450.1	chr17	-	2504	2	Genic_Genomic	ENSMUSG00000084755.2	novel	262	1	NA	NA	-1074	1374	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56322618	56319908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_56321602_56321807
ES.15451.1	chr17	-	2227	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	-154	0	-154	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343789	56323749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.10	chr17	-	2029	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.298747855629	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343604	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325951_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.11	chr17	-	2056	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	221.149577893491	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343595	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324819_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.12	chr17	-	2015	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	221.496816018138	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343586	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327184_56343414
ES.15451.13	chr17	-	1890	11	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.27753089667	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343605	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324336_56324487_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.14	chr17	-	2209	8	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	635	junction_7	48.5705882280246	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343583	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.15	chr17	-	1647	7	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.002425032423	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343586	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326073_56343403
ES.15451.16	chr17	-	1978	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	217.425735866948	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343601	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326375_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.17	chr17	-	2039	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	221.337349361156	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343596	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325114_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.18	chr17	-	2141	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	635	junction_8	45.8405865472945	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343597	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.19	chr17	-	2074	9	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	234.57181736091	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343566	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324849_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.2	chr17	-	2344	7	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-21	0	intron_retention	FALSE	canonical	3	635	junction_6	41.4434018337727	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343597	56323749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324901_56324982_56325108_56325574_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.20	chr17	-	2069	8	NIC	ENSMUSG00000003200.11	novel	1375	9	NA	NA	3	-1	intron_retention	FALSE	canonical	2	6	junction_2	239.082088199763	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343632	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56325574_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.21	chr17	-	2026	10	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	220.522611589429	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343605	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324885_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.22	chr17	-	2688	7	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	585	junction_1	46.5752079973885	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTGTCCCATCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	56343584	56323751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56326174_56326315_56326999_56327122_56327192_56343414
ES.15451.23	chr17	-	2668	7	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	5	-2	intron_retention	FALSE	canonical	3	585	junction_1	55.355417279813	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTGTCCCATCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	56343563	56323751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56324982_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.24	chr17	-	1993	8	NIC	ENSMUSG00000003200.11	novel	1375	9	NA	NA	-29	-2	intron_retention	FALSE	canonical	2	6	junction_2	246.729298906262	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTGTCCCATCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	56343605	56323751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.25	chr17	-	2132	9	NNC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_5	229.874932028266	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTGTCCCATCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	56343596	56323751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326292_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.27	chr17	-	3135	1	FSM	ENSMUSG00000003200.11	ENSMUST00000233034.2	3093	1	-16	-26	-8	26	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACAGGCAGGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	56343584	56340449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56340400_56343600
ES.15451.4	chr17	-	1909	9	FSM	ENSMUSG00000003200.11	ENSMUST00000233803.2	1375	9	-20	-514	-20	0	multi-exon	FALSE	canonical	2	6	junction_2	231.47678069301	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343596	56323749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56324737_56324843_56324901_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.7	chr17	-	1930	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	223.816191326722	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343637	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326925_56326999_56327122_56327192_56343414
ES.15451.8	chr17	-	2136	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	13	-1	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343622	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15451.9	chr17	-	2230	8	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	585	junction_1	52.4832334743046	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTCCCATCTTCAT	NA	False	NA	-2	True	ATTAAA	-16	NA	56343591	56323750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ES.15452.1	chr17	-	175	1	Intergenic	novelGene_12892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAATGTT	NA	False	NA	NA	False	NA	NA	NA	56345136	56344961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56345000_56345100
ES.15453.1	chr17	+	3540	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-203	2198	-203	-754	multi-exon	TRUE	canonical	3	392	junction_3	50.5723455079702	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCTGGGCACAGTCC	NA	False	NA	72	True	NA	NA	NA	56347235	56375078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.10	chr17	+	6718	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-94	-805	intron_retention	FALSE	canonical	3	392	junction_3	54.1056511614388	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347344	56375027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369312_56369550_56369720_56369810_56369892_56370327_56371257_56371973_56372426_56374406
ES.15453.100	chr17	+	3822	9	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	309	junction_8	173.522648017485	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404527_56404881_56404986_56405483_56405558_56405682_56406986_56407347
ES.15453.101	chr17	+	1613	13	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.81692304983	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAAGAAACAGCTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	56386661	56407593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403084_56404500_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.102	chr17	+	3407	10	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_6	260.508098023464	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404529_56404881_56404986_56405483_56406388_56406858_56406986_56407344
ES.15453.103	chr17	+	2604	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	2	intron_retention	FALSE	canonical	1	6	junction_12	222.899584683487	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAACAGCTTTTA	NA	False	NA	NA	False	TATAAA	-12	NA	56386661	56407594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406858_56406986_56407344
ES.15453.104	chr17	+	2852	12	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	intron_retention	FALSE	canonical	0	0	junction_7	309.165766336411	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56405483_56405558_56405694_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.105	chr17	+	2164	17	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	214.638613429644	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404329_56404419_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.108	chr17	+	3743	11	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	635	junction_10	68.2908485816365	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56406986_56407344
ES.15453.11	chr17	+	7645	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-92	-2018	-92	5	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGACCATGGTGTCT	NA	False	NA	8	True	NA	NA	NA	56347346	56379294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.110	chr17	+	2262	16	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	24	2	at_least_one_novel_splicesite	TRUE	canonical	2	96	junction_8	263.878372655956	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAACAGCTTTTA	NA	False	NA	NA	False	TATAAA	-12	NA	56386661	56407594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404240_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.111	chr17	+	2962	14	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_7	228.663469422907	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404601_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.112	chr17	+	2886	16	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	24	2	intron_retention	FALSE	canonical	1	2	junction_1	296.767892842575	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAACAGCTTTTA	NA	False	NA	NA	False	TATAAA	-12	NA	56386661	56407594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56388316_56388391_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.114	chr17	+	2278	16	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.740528350143	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAACAGCTTTTA	NA	False	NA	NA	False	TATAAA	-12	NA	56386661	56407594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389181_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403283_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.115	chr17	+	3689	11	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	635	junction_10	68.5985422585641	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56406986_56407344
ES.15453.116	chr17	+	2039	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	236.294420701035	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.118	chr17	+	2249	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	96	junction_8	200.593940309494	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404240_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.119	chr17	+	3398	13	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	635	junction_12	79.0658568676911	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406986_56407344
ES.15453.12	chr17	+	4194	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-92	-808	intron_retention	FALSE	canonical	3	392	junction_3	54.0208101927794	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347346	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369720_56369810_56369892_56370327_56371257_56371973_56372426_56374406
ES.15453.121	chr17	+	1623	11	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.113893876805	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAACAGCTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	56386662	56407595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386822_56403860_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.122	chr17	+	2988	13	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	635	junction_12	78.2565226248479	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386662	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.123	chr17	+	3536	11	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	25	-2	intron_retention	FALSE	canonical	3	309	junction_10	164.328360303388	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386662	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406986_56407347
ES.15453.127	chr17	+	2245	15	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	334.813533240245	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386662	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403656_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406858_56407006_56407344
ES.15453.128	chr17	+	2281	16	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	237.52806617792	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386662	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405793_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.129	chr17	+	2325	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	25	-2	intron_retention	FALSE	canonical	3	507	junction_6	106.207344378814	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386662	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.13	chr17	+	2554	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-77	-802	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	133.669030527726	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTCTGTCTCAACT	NA	False	NA	24	True	TATAAA	-18	NA	56347361	56375030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.130	chr17	+	2241	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	220.758591125137	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAACAGCTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	56386663	56407595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400728_56403023_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.131	chr17	+	1707	13	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	237.676644834952	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386663	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.133	chr17	+	3954	11	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	30	0	intron_retention	FALSE	canonical	1	2	junction_1	332.657917386615	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386667	56407592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56388316_56388391_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973
ES.15453.135	chr17	+	3046	11	NNC	ENSMUSG00000002833.12	novel	2238	16	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	245.835331065329	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386692	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404529_56405483_56405558_56405682_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.136	chr17	+	2811	15	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	4	junction_14	217.677818468169	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386693	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56407006_56407347
ES.15453.138	chr17	+	1825	15	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	-5	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	228.770226049044	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAACAGCTTTTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	56386693	56407597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56403911_56404442_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.14	chr17	+	4459	13	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-76	3133	-76	-1689	5prime_fragment	FALSE	canonical	3	392	junction_3	36.9500413471427	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	56347362	56374143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973
ES.15453.141	chr17	+	3806	14	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	-472	-2	intron_retention	FALSE	canonical	3	309	junction_13	149.572962148636	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56387951	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.142	chr17	+	2415	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	249.767002535474	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388418	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.143	chr17	+	2347	17	NNC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	319.930455089462	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56388434	56407592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406282_56406666_56406764_56406858_56406986_56407347
ES.15453.144	chr17	+	2371	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	208.4942205434	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388435	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.145	chr17	+	3620	11	NIC	ENSMUSG00000002833.12	novel	2238	16	NA	NA	14	-2	intron_retention	FALSE	canonical	3	635	junction_10	88.725926312437	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388437	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404164_56404234_56404527_56404881_56404986_56405483_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.146	chr17	+	2620	14	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	20	0	intron_retention	FALSE	canonical	1	21	junction_3	256.410082051223	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56388443	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56389177_56389276_56389416_56400521_56400723_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.147	chr17	+	2523	14	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	60	junction_1	249.034633175207	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56388443	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407347
ES.15453.148	chr17	+	2452	15	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	60	junction_1	239.981546909638	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56388443	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407347
ES.15453.149	chr17	+	2843	14	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	21	-2	intron_retention	FALSE	canonical	3	309	junction_13	165.682450960302	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388444	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407347
ES.15453.15	chr17	+	4459	12	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-76	-806	intron_retention	FALSE	canonical	0	0	junction_2	178.301722179656	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347362	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56353822_56354321_56354468_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.151	chr17	+	2337	16	NNC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	307.431683468051	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388454	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405742_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.152	chr17	+	3699	12	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	207	-2	intron_retention	FALSE	canonical	3	309	junction_11	158.122402634402	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56388630	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406986_56407347
ES.15453.153	chr17	+	2112	15	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	2397	2	672	0	3prime_fragment	FALSE	canonical	3	148	junction_5	185.577422096107	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56389095	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.154	chr17	+	176	1	Intergenic	novelGene_12897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTGAGGTAA	7242	False	NA	NA	False	NA	NA	NA	56400942	56401118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56400900_56401100
ES.15453.155	chr17	+	2350	9	NIC	ENSMUSG00000002833.12	novel	2238	16	NA	NA	-748	-2	intron_retention	FALSE	canonical	3	635	junction_8	97.0359952543385	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	9409	False	NA	NA	False	TATAAA	-23	NA	56403109	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.157	chr17	+	2175	7	NIC	ENSMUSG00000002833.12	novel	2238	16	NA	NA	-261	0	intron_retention	FALSE	canonical	3	635	junction_6	97.3266264812575	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	9896	False	NA	NA	False	TATAAA	-14	NA	56403596	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56406388_56406858_56406986_56407344
ES.15453.16	chr17	+	7606	10	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-76	-808	intron_retention	FALSE	canonical	3	392	junction_3	54.8204701787324	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347362	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.17	chr17	+	6120	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-76	-805	intron_retention	FALSE	canonical	3	392	junction_3	52.4109694837085	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347362	56375027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.19	chr17	+	3598	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-74	-806	intron_retention	FALSE	canonical	3	392	junction_3	52.3192656251553	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347364	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.2	chr17	+	3414	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-118	59313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	128.154821069148	1287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGAGGGGAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	56347320	56438602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406_56375018_56438582
ES.15453.21	chr17	+	5330	10	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-73	-806	intron_retention	FALSE	canonical	3	392	junction_3	57.5205813944071	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347365	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369720_56369810_56372426_56374406
ES.15453.24	chr17	+	12064	11	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-68	0	intron_retention	FALSE	canonical	0	0	junction_10	146.717585858001	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGCCTTGACCATGG	NA	False	NA	3	True	NA	NA	NA	56347370	56379289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369312_56369550_56369720_56369810_56372426_56374406_56378637_56378679
ES.15453.26	chr17	+	3304	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-63	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.842204410823	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347375	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347510_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.28	chr17	+	3361	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-58	-805	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	130.607229971047	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347380	56375027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371956_56372426_56374406
ES.15453.29	chr17	+	4893	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-56	-806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	125.013324733593	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347382	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56372854
ES.15453.30	chr17	+	3312	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-51	-806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	132.93456146968	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347387	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369574_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.33	chr17	+	4359	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-51	-799	intron_retention	FALSE	canonical	3	392	junction_3	54.2741738805228	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGTCTCAACTATC	NA	False	NA	27	True	TATAAA	-21	NA	56347387	56375033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56371257_56371973_56372426_56374406
ES.15453.34	chr17	+	3232	15	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-51	-806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.154821069148	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347387	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354365_56354468_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.35	chr17	+	2885	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-51	-805	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	127.291741680283	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347387	56375027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56374406
ES.15453.36	chr17	+	3278	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-50	-806	combination_of_known_splicesites	FALSE	canonical	2	16	junction_3	133.828325975233	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347388	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.37	chr17	+	3330	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-50	-802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	131.842204410823	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTCTGTCTCAACT	NA	False	NA	24	True	TATAAA	-18	NA	56347388	56375030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370412_56371000_56371257_56371973_56372426_56374406
ES.15453.38	chr17	+	3322	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-49	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	174.566445192031	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347389	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366058_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370329_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.39	chr17	+	8902	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-49	8	intron_retention	FALSE	canonical	3	392	junction_3	52.2185489984558	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACCATGGTGTCTCTT	NA	False	NA	11	True	NA	NA	NA	56347389	56379297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.4	chr17	+	3329	13	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-102	-806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	137.443220599959	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347336	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56370304_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.40	chr17	+	2673	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-47	-808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.953640774362	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347391	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351102_56354468_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.41	chr17	+	4866	11	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-45	-806	intron_retention	FALSE	canonical	3	392	junction_3	54.6066845724953	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347393	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.42	chr17	+	3069	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-40	-806	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	132.927611879549	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347398	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371973_56372426_56374406
ES.15453.43	chr17	+	3316	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-40	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	132.93456146968	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347398	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369557_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.44	chr17	+	5330	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-38	243	-38	-243	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCAGTCGTAGACCC	NA	False	NA	NA	False	ATTAAA	-35	NA	56347400	56377033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.45	chr17	+	6190	14	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-37	-801	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	175.014927512115	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTCTGTCTCAACTA	NA	False	NA	25	True	TATAAA	-19	NA	56347401	56375031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56354778_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56367137_56367174_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.46	chr17	+	10032	8	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-36	-806	intron_retention	FALSE	canonical	3	392	junction_3	38.7187662141094	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347402	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369720_56369810
ES.15453.47	chr17	+	2461	13	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-33	-806	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	137.983971492666	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347405	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56347552_56351061_56351113_56353822_56353867_56364749_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.48	chr17	+	4555	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-32	-808	intron_retention	FALSE	canonical	3	392	junction_3	51.2306196418596	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTCTGTCTTCTGTC	NA	False	NA	18	True	TATAAA	-12	NA	56347406	56375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.49	chr17	+	11610	11	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-5	2	intron_retention	FALSE	canonical	3	392	junction_3	54.6739426052301	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCCTTGACCATGGTG	NA	False	NA	5	True	NA	NA	NA	56347433	56379291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.5	chr17	+	4678	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-96	-806	intron_retention	FALSE	canonical	3	392	junction_3	52.2185489984558	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56347342	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
ES.15453.51	chr17	+	2979	10	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-24	59313	intron_retention	FALSE	non_canonical	0	0	junction_9	153.836132152221	1286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGAGGGGAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	56364718	56438602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56372426_56374406_56375018_56438582
ES.15453.53	chr17	+	4264	6	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	1720	-806	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	198.817101880095	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCTGTCTTCTGTCTC	NA	False	NA	20	True	TATAAA	-14	NA	56366462	56375026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371973_56372426_56374406
ES.15453.54	chr17	+	163	1	Intergenic	novelGene_12895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAATAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	56384549	56384712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56384500_56384700
ES.15453.56	chr17	+	2307	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	-24	-13	-24	-2	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386609	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.57	chr17	+	2946	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	635	junction_13	80.5285792188458	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386612	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.58	chr17	+	2307	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	219.25719043068	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386620	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56407006_56407344
ES.15453.59	chr17	+	2865	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	635	junction_14	77.6569181642918	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386622	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.6	chr17	+	3156	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-95	2474	-95	-1030	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAGGTCTGGAGTCT	NA	False	NA	NA	False	GATAAA	-16	NA	56347343	56374802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.60	chr17	+	3007	13	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	635	junction_12	78.0581602965948	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386622	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.61	chr17	+	2381	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	148	junction_6	184.900593811477	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386633	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.62	chr17	+	2981	13	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	309	junction_12	155.664079207618	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386639	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.63	chr17	+	3022	13	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	635	junction_12	83.7874294469841	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56386639	56407607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.65	chr17	+	2298	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	-53	-7	8	-2	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386645	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.67	chr17	+	2246	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	221.546343283346	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386659	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389405_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.68	chr17	+	2044	15	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	250.13601402078	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386659	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.69	chr17	+	2133	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_4	223.569009571578	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.7	chr17	+	3330	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-95	-805	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	134.66406247482	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTCTTCTGTCTCA	NA	False	NA	21	True	TATAAA	-15	NA	56347343	56375027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ES.15453.70	chr17	+	2886	14	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	309	junction_13	147.996161792546	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.71	chr17	+	2977	13	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	0	intron_retention	FALSE	canonical	1	4	junction_12	234.352476695539	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56407006_56407347
ES.15453.73	chr17	+	2792	15	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_7	247.083777001127	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404257_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.75	chr17	+	2330	17	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	275.572238430779	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56388316_56388391_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.76	chr17	+	2963	13	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	635	junction_12	76.9420777814931	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.77	chr17	+	2255	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	270.887791447964	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386660	56407592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405742_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.78	chr17	+	3043	12	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-2	intron_retention	FALSE	canonical	3	635	junction_11	80.0503973488107	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.80	chr17	+	2235	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	221.509628584302	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404246_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.81	chr17	+	2919	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	635	junction_13	80.5537051182875	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.82	chr17	+	2867	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	27	-624	23	609	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTAGTACTGCTGGGGT	NA	False	NA	NA	False	GATAAA	-18	NA	56386660	56408216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.83	chr17	+	2076	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	220.549834712785	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAACAGCTTTTA	NA	False	NA	NA	False	TATAAA	-12	NA	56386660	56407594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.84	chr17	+	2901	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-2	intron_retention	FALSE	canonical	3	635	junction_13	79.7706772363477	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.85	chr17	+	3106	13	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	309	junction_12	147.522785434055	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.86	chr17	+	2714	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	intron_retention	FALSE	canonical	2	36	junction_8	215.101242159822	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.87	chr17	+	2819	14	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	507	junction_6	107.493552854697	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386660	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406986_56407344
ES.15453.89	chr17	+	3070	12	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	23	-2	intron_retention	FALSE	canonical	3	635	junction_11	81.5283756311743	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.9	chr17	+	4100	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-94	-802	intron_retention	FALSE	canonical	3	392	junction_3	50.8895863610621	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTCTGTCTCAACT	NA	False	NA	24	True	TATAAA	-18	NA	56347344	56375030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56372426_56374406
ES.15453.90	chr17	+	3216	12	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	23	-2	intron_retention	FALSE	canonical	3	309	junction_11	153.621193441466	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386660	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56406388_56406858_56406986_56407347
ES.15453.92	chr17	+	2961	15	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-1	intron_retention	FALSE	canonical	1	2	junction_1	290.428606563135	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAACAGCTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	56386661	56407595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56388316_56388391_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.93	chr17	+	2316	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	507	junction_5	108.412971774505	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386661	56407592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.94	chr17	+	2844	15	NNC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	24	0	intron_retention	FALSE	canonical	2	3	junction_9	241.295958929938	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405453_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ES.15453.95	chr17	+	2908	14	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_11	228.183254497643	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406156_56406388_56406858_56406986_56407344
ES.15453.96	chr17	+	3543	11	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	635	junction_10	79.9722451854392	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	False	NA	NA	False	TATAAA	-23	NA	56386661	56407605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406986_56407344
ES.15453.97	chr17	+	3063	12	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	635	junction_11	80.3558202698452	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56404017_56404087_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406388_56406858_56406986_56407344
ES.15453.98	chr17	+	2265	16	NNC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	24	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	260.381736857424	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386661	56407592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389420_56400529_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15453.99	chr17	+	1828	14	NNC	ENSMUSG00000002833.12	novel	2238	16	NA	NA	24	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	278.33996496133	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386661	56407596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56403980_56404921_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ES.15454.1	chr17	-	169	1	Intergenic	novelGene_12893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	NA	NA	NA	56359946	56359777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56359800_56359900
ES.15455.1	chr17	-	1746	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	1	1202	1	3	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGTGTTTCATCAGAG	6307	False	NA	1	True	AATAAA	-20	NA	56382027	56375246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.10	chr17	-	1396	11	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	76.9846737993998	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGGCTCCAGTCTCAT	6358	False	NA	-18	True	AATAAA	-14	NA	56381976	56375536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377660_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.2	chr17	-	3059	9	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	-87	0	intron_retention	FALSE	canonical	2	13	junction_8	82.5359770039708	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6700	False	NA	-2	True	AATAAA	-17	NA	56381634	56375249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56375684_56375959_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56379530_56379719_56379785_56380072_56380237_56381616
ES.15455.3	chr17	-	2239	10	NIC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	50	0	intron_retention	FALSE	canonical	0	0	junction_4	81.7231097466724	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6367	False	NA	-2	True	AATAAA	-17	NA	56381967	56375249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56377255_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.4	chr17	-	1787	10	NIC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	19	-2	intron_retention	FALSE	canonical	3	209	junction_9	26.4523797617857	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCCCAGTGTTTCAT	6336	False	NA	-4	True	AATAAA	-15	NA	56381998	56375251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56375684_56375959_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.5	chr17	-	1458	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	28	1463	17	28	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCATTCCTTTCCCTGA	6334	False	NA	11	True	AATAAA	-43	NA	56382000	56375507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.6	chr17	-	1513	10	NIC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	17	6	intron_retention	FALSE	canonical	3	209	junction_9	26.387894718115	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGTCTCATGCTGTTC	6334	False	NA	-11	True	AATAAA	-21	NA	56382000	56375529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ES.15455.7	chr17	-	1505	11	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	-96	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	78.0715056854932	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGTCTCATGCTGTTC	6691	False	NA	-11	True	AATAAA	-21	NA	56381643	56375529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381409
ES.15455.8	chr17	-	3332	3	FSM	ENSMUSG00000019578.12	ENSMUST00000134441.2	745	3	-2587	0	211	0	multi-exon	FALSE	canonical	3	245	junction_1	30	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTCCAGTCTCATG	9313	False	NA	-17	True	AATAAA	-15	NA	56379021	56375535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56376109_56376183_56376315_56376393
ES.15455.9	chr17	-	1231	9	NNC	ENSMUSG00000019578.12	novel	2949	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	86.4244612363884	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTCCAGTCTCATG	6326	False	NA	-17	True	AATAAA	-15	NA	56382008	56375535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377973_56380072_56380237_56381835
ES.15456.1	chr17	-	160	1	Intergenic	novelGene_12894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	4962	False	NA	NA	False	NA	NA	NA	56383372	56383212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56383200_56383400
ES.15457.1	chr17	-	210	1	Intergenic	novelGene_12896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCAATCTCAAGCCGG	NA	False	NA	NA	False	AAAAAG	-11	NA	56398989	56398779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56398800_56399000
ES.15458.1	chr17	-	170	1	Intergenic	novelGene_12898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATCA	NA	False	NA	NA	False	NA	NA	NA	56401984	56401814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56401800_56402000
ES.15459.1	chr17	-	180	1	Antisense	novelGene_ENSMUSG00000002833.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAACCCTC	6303	False	NA	NA	False	NA	NA	NA	56406797	56406617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56406600_56406800
ES.1546.1	chr1	-	5569	5	Antisense	novelGene_ENSMUSG00000006005.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150322694	150313331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_150315028_150315817_150316280_150317808_150319003_150319084_150320224_150321616
ES.1546.2	chr1	-	5448	6	Antisense	novelGene_ENSMUSG00000006005.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150322694	150313331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_150315028_150315817_150316280_150317808_150319003_150319084_150320224_150321616_150321713_150321833
ES.15460.1	chr17	-	1934	9	FSM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	51	1	51	-1	multi-exon	FALSE	canonical	2	6	junction_1	3.19912097301743	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGGTTTTGGAACTTGG	1144	False	NA	NA	False	AATAAA	-19	NA	56424545	56418601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56419542_56419869_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
ES.15461.1	chr17	-	3784	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	-48	0	-48	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8303	False	NA	NA	False	AATAAA	-22	NA	56447391	56430084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
ES.15461.2	chr17	-	3716	17	NNC	ENSMUSG00000001227.13	novel	3736	17	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4.23480740412123	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8315	False	NA	NA	False	AATAAA	-22	NA	56447379	56430084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435305_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
ES.15461.3	chr17	-	3392	13	NNC	ENSMUSG00000001227.13	novel	3736	17	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4.61579414137541	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8316	False	NA	NA	False	AATAAA	-22	NA	56447378	56430084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437768_56439715_56439869_56447213
ES.15461.5	chr17	-	4132	16	NIC	ENSMUSG00000001227.13	novel	3736	17	NA	NA	-13	-5	intron_retention	FALSE	canonical	2	8	junction_2	3.43446583263767	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCCTTGACTCTGGG	8338	False	NA	NA	False	AATAAA	-17	NA	56447356	56430089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
ES.15461.6	chr17	-	1135	1	ISM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	15442	682	8942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGAGTTTTTTTTTTTT	8323	False	NA	NA	False	NA	NA	NA	56431901	56430766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56430800_56431900
ES.15462.1	chr17	+	1051	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	35	1293	35	-1293	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTCAGGTCGTCCCAA	448	False	NA	NA	False	NA	NA	NA	56469511	56479662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56469607_56478706
ES.15462.2	chr17	+	1401	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	44	934	44	-934	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTGTCACCAAACTTG	457	False	NA	NA	False	AATAAA	-31	NA	56469520	56480021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56469607_56478706
ES.15463.1	chr17	-	1747	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	-8	-29	-8	29	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTCTAAGTGTCCA	NA	False	NA	0	True	NA	NA	NA	56490928	56482714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ES.15463.10	chr17	-	915	6	NNC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	11	-802	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	482.713413942476	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGATGGATTCTCATCG	NA	False	NA	-5	True	AATAAA	-44	NA	56490909	56483545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486444_56489664_56489716_56490738
ES.15463.11	chr17	-	1933	5	ISM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	-2	802	-2	-802	intron_retention	FALSE	canonical	3	1137	junction_1	54.3622111397246	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGATGGATTCTCATCG	NA	False	NA	-5	True	AATAAA	-44	NA	56490922	56483545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664
ES.15463.12	chr17	-	878	6	NNC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	20	-805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	476.623541172695	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGAGATGGATTCTCA	NA	False	NA	-8	True	AATAAA	-41	NA	56490900	56483548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56484004_56484698_56484772_56485263_56485339_56486363_56486426_56489664_56489716_56490738
ES.15463.2	chr17	-	6815	4	NNC	ENSMUSG00000019579.14	novel	464	4	NA	NA	21	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	536.458344660194	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACAAACCACCTGAAGC	NA	False	NA	-31	True	NA	NA	NA	56490899	56482745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56483124_56483180_56485521_56485779_56489716_56490738
ES.15463.3	chr17	-	2965	3	NNC	ENSMUSG00000019579.14	novel	464	4	NA	NA	4639	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACAAACCACCTGAAGC	NA	False	NA	-31	True	NA	NA	NA	56486025	56482745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56483115_56483170_56485521_56485779
ES.15463.5	chr17	-	1180	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	5	525	5	-525	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTATGCTCTCTCTGTGT	NA	False	NA	0	True	AATGAA	-21	NA	56490915	56483268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ES.15463.7	chr17	-	1412	5	NIC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	-8	-798	intron_retention	FALSE	canonical	3	1137	junction_1	48.7570507721704	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGATTCTCATCGTTTT	NA	False	NA	-1	True	AATAAA	-44	NA	56490928	56483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56484004_56484698_56485346_56486363_56486426_56489664_56489716_56490738
ES.15463.8	chr17	-	973	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	-61	798	-61	-798	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGATTCTCATCGTTTT	NA	False	NA	-1	True	AATAAA	-44	NA	56490981	56483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ES.15463.9	chr17	-	1012	5	NNC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	11	-800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	531.897252765983	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGATTCTCATCGTT	NA	False	NA	-3	True	AATAAA	-42	NA	56490909	56483543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486590_56490738
ES.15464.1	chr17	+	166	1	Intergenic	novelGene_12899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTATTTGTCCTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	56491078	56491244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56491100_56491200
ES.15465.1	chr17	-	3849	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-17	-458	-1	448	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGGGTAAGCCGCTCT	NA	False	NA	NA	False	ATTAAA	-27	NA	56525906	56493358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.10	chr17	-	3918	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	8	133	intron_retention	FALSE	non_canonical	0	0	junction_18	40.8294930166908	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525881	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518585_56518834_56524408_56524462_56525740
ES.15465.11	chr17	-	3826	20	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	47	133	intron_retention	FALSE	canonical	3	103	junction_19	12.9454427322756	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525842	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.12	chr17	-	3420	20	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	32.5677644270895	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56518579_56518834_56524408_56524462_56525740
ES.15465.13	chr17	-	5392	6	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	23827	-143	14146	133	intron_retention	FALSE	canonical	3	139	junction_5	1.72046505340853	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56502062	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013
ES.15465.14	chr17	-	4296	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	280	133	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	31.4942851958891	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525609	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56524681
ES.15465.15	chr17	-	3515	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.0563566239209	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502043_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.16	chr17	-	4116	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	280	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.7005914771318	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGCCGCAGTGAGGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	56525609	56493674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56524860
ES.15465.17	chr17	-	3662	22	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.8737804496506	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTGCCGCAGTGAGGC	NA	False	NA	NA	False	ATTAAA	-14	NA	56525905	56493675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496749_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.18	chr17	-	2917	17	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	27	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	34.1626966697595	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525862	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56518579_56518834_56524408_56524462_56525740
ES.15465.19	chr17	-	4728	19	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1	130	intron_retention	TRUE	canonical	1	2	junction_8	32.7372630966874	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525904	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.2	chr17	-	4258	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-6	443	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	31.2881367294379	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCACGTGGGTAAGCC	NA	False	NA	NA	False	ATTAAA	-22	NA	56525895	56493363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525315
ES.15465.20	chr17	-	5041	20	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1	130	intron_retention	FALSE	canonical	0	0	junction_15	41.0017903804752	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525904	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512447_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.21	chr17	-	3482	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	43	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	32.2776625547762	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525846	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509829_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.22	chr17	-	3538	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-10	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.1298537189325	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525915	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497137_56497680_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.23	chr17	-	3621	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-4	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	42.7299368124972	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525893	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501555_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513990_56518579_56518834_56524408_56524462_56525740
ES.15465.24	chr17	-	4639	22	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	53	130	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	45.6090057542991	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525836	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56524681
ES.15465.26	chr17	-	5007	18	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	6	130	intron_retention	FALSE	canonical	3	120	junction_17	8.90316999647649	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525883	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.28	chr17	-	3942	21	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	3	130	intron_retention	FALSE	canonical	3	13	junction_3	29.5202896327255	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTGCCGCAGTGAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	56525902	56493676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.29	chr17	-	4088	22	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	4	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	41.7264061539158	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGGTGCCGCAGTGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	56525885	56493677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56516643_56517223_56518579_56518834_56524408_56524462_56525740
ES.15465.3	chr17	-	3552	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-23	-155	-7	145	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCCTTCTCAAGTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	56525912	56493661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.31	chr17	-	4421	20	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	34	128	intron_retention	FALSE	canonical	3	103	junction_19	12.9454427322756	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56525855	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.32	chr17	-	3476	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.5869404864919	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56525904	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498106_56501415_56501555_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.33	chr17	-	3766	20	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1	128	intron_retention	FALSE	canonical	1	1	junction_12	47.7321125725346	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56525904	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.34	chr17	-	3593	19	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1343	128	intron_retention	FALSE	canonical	3	120	junction_18	10.7302790685466	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56524546	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.35	chr17	-	3243	19	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	53	128	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	44.219465296531	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56525836	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501907_56502061_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.36	chr17	-	3418	20	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	43.2952883632831	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTGGTGCCGCAGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56525905	56493678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56505971_56506105_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.38	chr17	-	4707	20	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-14	-40	2	30	intron_retention	FALSE	canonical	3	120	junction_19	10.4521068400644	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAACCACCTCTACATA	NA	False	NA	NA	False	NA	NA	NA	56525903	56493776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.39	chr17	-	3322	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	62	-10	62	0	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56525827	56493806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.4	chr17	-	4834	20	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-26	-155	-10	145	intron_retention	FALSE	canonical	3	120	junction_19	10.4521068400644	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCCTTCTCAAGTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	56525915	56493661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15465.40	chr17	-	3154	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-17	237	-1	-237	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGTACCGAGCAATGAAAC	NA	False	NA	NA	False	TTTAAA	-26	NA	56525906	56494053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.5	chr17	-	3961	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	1	137	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	31.2881367294379	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCAGTGAGGCTCCTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	56525904	56493669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525315
ES.15465.6	chr17	-	3652	22	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	37.462241005228	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.8	chr17	-	3440	21	NNC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	-4	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.1298537189325	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525893	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56494381_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ES.15465.9	chr17	-	4931	21	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	intron_retention	FALSE	canonical	3	13	junction_4	38.0818526335051	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
ES.15466.1	chr17	-	395	1	Intergenic	novelGene_12900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAACAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	56526715	56526320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56526300_56526700
ES.15466.2	chr17	-	173	1	Intergenic	novelGene_12901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56526715	56526542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56526500_56526700
ES.15467.1	chr17	+	178	2	Intergenic	novelGene_12902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACGATTACATAATGTG	NA	False	NA	NA	False	NA	NA	NA	56533385	56561045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56533546_56561027
ES.15467.2	chr17	+	178	1	Intergenic	novelGene_12903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	56533386	56533564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56533400_56533600
ES.15468.1	chr17	-	134	1	Intergenic	novelGene_12904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTAAATAAATA	8690	False	NA	NA	False	NA	NA	NA	56562816	56562682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56562700_56562800
ES.15469.1	chr17	+	3353	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	-38	3486	-38	-3486	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTAGCTGTTATTT	NA	False	NA	8	True	ATTAAA	-18	NA	56563771	56567124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56563800_56567100
ES.15469.2	chr17	+	2966	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	12	3823	12	-3823	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCAGCTCTCGATTCC	NA	False	NA	NA	False	AAAAAG	-22	NA	56563821	56566787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56563800_56566800
ES.15469.3	chr17	+	4280	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	12	2509	12	-2509	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGCTCAGTGGTAAGTG	NA	False	NA	NA	False	NA	NA	NA	56563821	56568101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56563800_56568100
ES.15469.4	chr17	+	4054	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	743	2004	743	-2004	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAGCAACAAATACC	NA	False	NA	NA	False	NA	NA	NA	56564552	56568606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56564600_56568600
ES.15469.5	chr17	+	4059	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	2738	4	2738	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTGTTTTAAAA	NA	False	NA	12	True	CATAAA	-19	NA	56566547	56570606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56566500_56570600
ES.1547.1	chr1	+	177	1	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAACAATGTA	NA	False	NA	NA	False	NA	NA	NA	150812170	150812347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_150812200_150812300
ES.15470.1	chr17	-	929	1	Intergenic	novelGene_12905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	56571704	56570775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56570800_56571700
ES.15470.2	chr17	-	703	1	Intergenic	novelGene_12906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAAATTTGGGGGC	NA	False	NA	NA	False	AATAAA	-14	NA	56571705	56571002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56571000_56571700
ES.15470.3	chr17	-	261	1	Intergenic	novelGene_12907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCATTACTTTGGGGC	NA	False	NA	50	True	NA	NA	NA	56571707	56571446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56571400_56571700
ES.15471.1	chr17	-	165	1	Intergenic	novelGene_12908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	56572994	56572829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56572800_56573000
ES.15472.1	chr17	+	297	1	Intergenic	novelGene_12909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	56575673	56575970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56575700_56576000
ES.15473.1	chr17	+	177	1	Intergenic	novelGene_12910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGT	5699	False	NA	NA	False	NA	NA	NA	56590701	56590878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56590700_56590900
ES.15474.1	chr17	+	4973	15	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-10703	0	intron_retention	FALSE	canonical	0	0	junction_1	616.656008365329	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1849	False	NA	36	True	AATAAA	-20	NA	56599617	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56600181_56610300_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627543_56629020_56629126_56629355
ES.15474.10	chr17	+	3537	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	655.998856706321	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	436	False	NA	36	True	AATAAA	-20	NA	56610336	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.100	chr17	+	4286	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	43	-2	intron_retention	FALSE	canonical	3	1413	junction_5	323.483904908256	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	542	False	NA	34	True	AATAAA	-18	NA	56610442	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.102	chr17	+	3683	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	44	-1	intron_retention	FALSE	canonical	3	268	junction_4	550.963624530291	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	543	False	NA	35	True	AATAAA	-19	NA	56610443	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.103	chr17	+	8577	11	NIC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	44	-1	intron_retention	FALSE	canonical	3	348	junction_3	617.631799699465	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	543	False	NA	35	True	AATAAA	-19	NA	56610443	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.105	chr17	+	3552	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	44	-1	intron_retention	FALSE	canonical	2	4	junction_14	598.661039320248	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	543	False	NA	35	True	AATAAA	-19	NA	56610443	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629026_56629126_56629355
ES.15474.106	chr17	+	3531	16	NIC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	45	-3	intron_retention	FALSE	canonical	3	348	junction_6	516.796990015314	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	544	False	NA	33	True	AATAAA	-17	NA	56610444	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.107	chr17	+	4883	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	52	0	intron_retention	FALSE	non_canonical	0	0	junction_4	609.196505425156	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	551	False	NA	36	True	AATAAA	-20	NA	56610451	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.109	chr17	+	3488	17	NNC	ENSMUSG00000001228.15	novel	949	4	NA	NA	414	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	690.44607127838	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	913	False	NA	36	True	AATAAA	-20	NA	56610813	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610981_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.11	chr17	+	5905	13	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	20	0	intron_retention	FALSE	canonical	3	1446	junction_1	304.934555820316	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	440	False	NA	36	True	AATAAA	-20	NA	56610340	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.110	chr17	+	3474	17	NNC	ENSMUSG00000001228.15	novel	949	4	NA	NA	450	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	579.66094615732	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	949	False	NA	34	True	AATAAA	-18	NA	56610849	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610981_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.111	chr17	+	3598	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	-206	-1	-171	1	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCGCACGTCTTTAAT	1241	False	NA	37	True	AATAAA	-21	NA	56611141	56630487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.112	chr17	+	3511	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	-107	-2	-107	2	multi-exon	FALSE	canonical	3	348	junction_6	590.514232338011	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGCACGTCTTTAATC	1305	False	NA	38	True	AATAAA	-22	NA	56611205	56630488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.113	chr17	+	3011	18	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	643.878317073367	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1326	False	NA	35	True	AATAAA	-19	NA	56611226	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355_56629603_56630102
ES.15474.115	chr17	+	3440	17	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	716.894169316504	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1365	False	NA	36	True	AATAAA	-20	NA	56611265	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.116	chr17	+	3464	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1365	False	NA	36	True	AATAAA	-20	NA	56611265	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.117	chr17	+	3015	15	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.270947308471	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1366	False	NA	33	True	AATAAA	-17	NA	56611266	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56617721_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.118	chr17	+	2714	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	-80	757	-45	390	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	2567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	1367	False	NA	28	True	NA	NA	NA	56611267	56629729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.119	chr17	+	3227	16	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	-44	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	779.386927156353	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1368	False	NA	33	True	AATAAA	-17	NA	56611268	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.12	chr17	+	4159	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	20	-1	intron_retention	FALSE	canonical	3	1413	junction_5	316.321875451081	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	440	False	NA	35	True	AATAAA	-19	NA	56610340	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.120	chr17	+	3254	15	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-44	-3	combination_of_known_splicesites	FALSE	canonical	2	28	junction_8	679.972523454486	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1368	False	NA	33	True	AATAAA	-17	NA	56611268	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.121	chr17	+	3488	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	656.93492531129	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1369	False	NA	35	True	AATAAA	-19	NA	56611269	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625226_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.122	chr17	+	3540	16	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	638	junction_1	436.811914774413	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1370	False	NA	35	True	AATAAA	-19	NA	56611270	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.123	chr17	+	3233	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-41	-228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	657.514730704758	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTTTGTAGTTACAG	1371	False	NA	NA	False	GATAAA	-16	NA	56611271	56630258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622310_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.125	chr17	+	6296	13	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	-40	-7	intron_retention	FALSE	canonical	3	638	junction_1	472.878324436871	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCAGTGGTGGCGCACG	1372	False	NA	29	True	AATAAA	-13	NA	56611272	56630479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.126	chr17	+	5408	14	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	638	junction_1	485.868392339486	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1375	False	NA	35	True	AATAAA	-19	NA	56611275	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.127	chr17	+	3317	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	656.597181973088	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGGTGGCGCACGTC	1390	False	NA	31	True	AATAAA	-15	NA	56611290	56630481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629102_56629457
ES.15474.128	chr17	+	3315	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	769.392008161134	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1403	False	NA	33	True	AATAAA	-17	NA	56611303	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.129	chr17	+	3462	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	663.446352390304	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1414	False	NA	35	True	AATAAA	-19	NA	56611314	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616297_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.13	chr17	+	3661	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	20	-1	intron_retention	FALSE	canonical	3	1413	junction_6	326.105190936231	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	440	False	NA	35	True	AATAAA	-19	NA	56610340	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.130	chr17	+	3390	18	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	849.953151568715	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	1415	False	NA	34	True	AATAAA	-18	NA	56611315	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612216_56613267_56613285_56616325_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.131	chr17	+	3315	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	59	junction_9	659.733663432954	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	1416	False	NA	34	True	AATAAA	-18	NA	56611316	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.134	chr17	+	3212	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-4	379	intron_retention	FALSE	canonical	3	268	junction_4	635.24555532137	2565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAAAAAATGTTTTTGT	1443	False	NA	17	True	NA	NA	NA	56611343	56629718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.135	chr17	+	3505	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	638	junction_1	457.93083417574	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1444	False	NA	33	True	AATAAA	-17	NA	56611344	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627543_56629020_56629126_56629355
ES.15474.139	chr17	+	3489	17	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	832.936913783841	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1447	False	NA	35	True	AATAAA	-19	NA	56611347	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629223
ES.15474.140	chr17	+	3832	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	676.703861046733	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.142	chr17	+	5167	14	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	390	intron_retention	FALSE	canonical	3	48	junction_1	604.30933729997	2567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	1447	False	NA	28	True	NA	NA	NA	56611347	56629729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.143	chr17	+	3281	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	23	junction_8	662.29871072064	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1448	False	NA	35	True	AATAAA	-19	NA	56611348	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.144	chr17	+	3257	16	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	23	junction_8	754.832331639874	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1448	False	NA	35	True	AATAAA	-19	NA	56611348	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.146	chr17	+	3486	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	638	junction_1	460.234210906674	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.147	chr17	+	3401	17	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	755.481652552694	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGTGGCGCACGTCT	1448	False	NA	32	True	AATAAA	-16	NA	56611348	56630482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616297_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.148	chr17	+	5431	14	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	638	junction_1	484.953996476186	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.149	chr17	+	4604	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	638	junction_1	463.260589013714	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1448	False	NA	33	True	AATAAA	-17	NA	56611348	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.15	chr17	+	3628	16	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	20	-1	intron_retention	FALSE	canonical	3	268	junction_4	670.523324641946	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	440	False	NA	35	True	AATAAA	-19	NA	56610340	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.151	chr17	+	3681	15	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	268	junction_4	639.301723662271	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1448	False	NA	33	True	AATAAA	-17	NA	56611348	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.152	chr17	+	3672	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	670.962976292698	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	1448	False	NA	34	True	AATAAA	-18	NA	56611348	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.153	chr17	+	3385	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	796.505139656989	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1448	False	NA	33	True	AATAAA	-17	NA	56611348	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617841_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629026_56629126_56629355
ES.15474.155	chr17	+	3311	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	569.488641238787	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGGTGGCGCACGTC	1448	False	NA	31	True	AATAAA	-15	NA	56611348	56630481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.156	chr17	+	3589	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	36	7	1	-7	intron_retention	FALSE	canonical	3	348	junction_6	603.731824203061	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCAGTGGTGGCGCACG	1448	False	NA	29	True	AATAAA	-13	NA	56611348	56630479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.158	chr17	+	3174	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	683.156679604971	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.160	chr17	+	3620	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	1	0	1	0	intron_retention	FALSE	canonical	3	638	junction_1	459.882429419617	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1448	False	NA	36	True	AATAAA	-20	NA	56611348	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.161	chr17	+	4814	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	683.528589989719	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1449	False	NA	33	True	AATAAA	-17	NA	56611349	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.163	chr17	+	3974	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	268	junction_4	635.24555532137	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1449	False	NA	36	True	AATAAA	-20	NA	56611349	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.164	chr17	+	4325	14	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	638	junction_1	451.266357535976	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1449	False	NA	35	True	AATAAA	-19	NA	56611349	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56620252_56622191_56622316_56622398_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.165	chr17	+	3716	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_15	669.34033860876	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1450	False	NA	35	True	AATAAA	-19	NA	56611350	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56628921
ES.15474.167	chr17	+	3473	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	3	-2	intron_retention	FALSE	canonical	3	268	junction_4	630.854221582838	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	1450	False	NA	34	True	AATAAA	-18	NA	56611350	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.168	chr17	+	3817	16	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	787.295087978806	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1450	False	NA	33	True	AATAAA	-17	NA	56611350	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.169	chr17	+	2474	12	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	665.801399917597	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1450	False	NA	35	True	AATAAA	-19	NA	56611350	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.17	chr17	+	3650	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	20	-3	intron_retention	FALSE	canonical	3	268	junction_4	551.314243925872	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	440	False	NA	33	True	AATAAA	-17	NA	56610340	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.170	chr17	+	5018	15	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	798.169589672239	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGTGGCGCACGTCT	1450	False	NA	32	True	AATAAA	-16	NA	56611350	56630482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.171	chr17	+	3359	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	661.917373525578	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1450	False	NA	35	True	AATAAA	-19	NA	56611350	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619242_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.172	chr17	+	4137	14	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	638	junction_1	455.9975345101	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1451	False	NA	36	True	AATAAA	-20	NA	56611351	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56620252_56622191_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.173	chr17	+	4262	15	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	5	-2	intron_retention	FALSE	canonical	3	48	junction_1	716.418619073445	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	1452	False	NA	34	True	AATAAA	-18	NA	56611352	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.175	chr17	+	5166	15	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	348	junction_4	627.200452936113	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1458	False	NA	35	True	AATAAA	-19	NA	56611358	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.176	chr17	+	3129	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	23	239	23	-239	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCGATGAATTTCTTT	1470	False	NA	NA	False	GATAAA	-5	NA	56611370	56630247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.177	chr17	+	5478	13	NIC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	23	-3	intron_retention	FALSE	canonical	3	348	junction_4	664.727654131124	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1470	False	NA	33	True	AATAAA	-17	NA	56611370	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.178	chr17	+	3866	15	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	25	0	intron_retention	FALSE	canonical	3	638	junction_1	465.218952182075	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1472	False	NA	36	True	AATAAA	-20	NA	56611372	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.179	chr17	+	3564	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	771.629604210304	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1473	False	NA	33	True	AATAAA	-17	NA	56611373	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.18	chr17	+	3337	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	21	228	21	-228	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTTTGTAGTTACAG	441	False	NA	NA	False	GATAAA	-16	NA	56610341	56630258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.180	chr17	+	4041	16	ISM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	1069	0	-17	0	3prime_fragment	FALSE	canonical	3	1413	junction_5	286.743757076283	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1489	False	NA	36	True	AATAAA	-20	NA	56611389	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.181	chr17	+	3991	16	NNC	ENSMUSG00000001228.15	novel	529	4	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_4	855.612191487605	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1496	False	NA	33	True	AATAAA	-17	NA	56611396	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611484_56612085_56612251_56616336_56616580_56617675_56617837_56619061_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.182	chr17	+	3431	17	NIC	ENSMUSG00000001228.15	novel	529	4	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	576.900551303039	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1496	False	NA	35	True	AATAAA	-19	NA	56611396	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611484_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.183	chr17	+	3355	17	NNC	ENSMUSG00000001228.15	novel	949	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	579.66094615732	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1498	False	NA	35	True	AATAAA	-19	NA	56611398	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611484_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.184	chr17	+	3374	17	NIC	ENSMUSG00000001228.15	novel	529	4	NA	NA	21	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	688.208816421295	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	1527	False	NA	33	True	AATAAA	-17	NA	56611427	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56611484_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.185	chr17	+	3897	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	196	1	102	-1	3prime_fragment	FALSE	canonical	3	348	junction_5	500.6524898126	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1608	False	NA	35	True	AATAAA	-19	NA	56611508	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.186	chr17	+	3449	17	NNC	ENSMUSG00000001228.15	novel	949	4	NA	NA	126	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	579.66094615732	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	1632	False	NA	35	True	AATAAA	-19	NA	56611532	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56611638_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.187	chr17	+	4243	13	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	677	-1	intron_retention	FALSE	canonical	3	1855	junction_1	204.461674621159	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	2183	False	NA	35	True	AATAAA	-19	NA	56612083	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56612251_56616336_56616580_56617675_56617837_56619053_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.188	chr17	+	3287	17	NNC	ENSMUSG00000001228.15	novel	949	4	NA	NA	1382	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	751.311454953104	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	2888	False	NA	35	True	AATAAA	-19	NA	56612788	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56612862_56613330_56613366_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.189	chr17	+	3036	14	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-3104	-5	intron_retention	FALSE	canonical	3	1413	junction_4	297.624281633323	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGGTGGCGCACGTC	3059	False	NA	31	True	AATAAA	-15	NA	56616558	56630481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.19	chr17	+	4485	14	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	21	0	intron_retention	FALSE	canonical	3	1413	junction_5	331.345651591208	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	441	False	NA	36	True	AATAAA	-20	NA	56610341	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.190	chr17	+	2938	14	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	6326	1	-1989	-1	3prime_fragment	FALSE	canonical	3	1413	junction_3	299.4646110218	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	4174	False	NA	35	True	AATAAA	-19	NA	56617673	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.191	chr17	+	7308	7	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-1950	-1	intron_retention	FALSE	canonical	3	1413	junction_1	368.48628046223	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	4213	False	NA	35	True	AATAAA	-19	NA	56617712	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56619968_56620040_56620252_56622191_56622316_56622398_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.192	chr17	+	5453	11	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-1897	-1	intron_retention	FALSE	canonical	3	1861	junction_1	171.603030276275	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	4266	False	NA	35	True	AATAAA	-19	NA	56617765	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56617837_56619053_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.193	chr17	+	6353	9	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-1354	-5	intron_retention	FALSE	canonical	3	2127	junction_3	124.378894411391	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGGTGGCGCACGTC	4809	False	NA	31	True	AATAAA	-15	NA	56618308	56630481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.194	chr17	+	2919	12	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	-1098	383	intron_retention	FALSE	non_canonical	0	0	junction_1	821.077059227745	2565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTTTGTTTTT	5065	False	NA	21	True	NA	NA	NA	56618564	56629722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56619420_56619801_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.196	chr17	+	5187	6	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	231	-1	intron_retention	FALSE	canonical	3	1964	junction_1	196.571004982932	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	6394	False	NA	35	True	AATAAA	-19	NA	56619893	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56620252_56622191_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.197	chr17	+	5484	7	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1388	0	intron_retention	FALSE	canonical	3	2243	junction_1	114.501334295962	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	7551	False	NA	36	True	AATAAA	-20	NA	56621050	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56622316_56622398_56622507_56622776_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.198	chr17	+	5260	6	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1839	-3	intron_retention	FALSE	canonical	3	2243	junction_1	120.320239361464	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	8002	False	NA	33	True	AATAAA	-17	NA	56621501	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56622316_56622398_56622507_56622776_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.199	chr17	+	4600	6	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	2292	0	intron_retention	FALSE	canonical	1	4	junction_5	1166.98407872601	2579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	8455	False	NA	36	True	AATAAA	-20	NA	56621954	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56622316_56622776_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629026
ES.15474.2	chr17	+	3655	18	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-583	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	697.217152532457	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	NA	False	NA	36	True	AATAAA	-20	NA	56609737	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56609796_56610300_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.20	chr17	+	2812	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	21	753	21	394	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	2567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTGTTTTTTTTTT	441	False	NA	32	True	NA	NA	NA	56610341	56629733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.200	chr17	+	3645	6	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	2421	0	intron_retention	FALSE	canonical	0	0	junction_1	946.055600903034	2579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	8584	False	NA	36	True	AATAAA	-20	NA	56622083	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56622316_56622426_56622507_56622776_56622882_56624003_56625385_56627161_56627543_56629020
ES.15474.201	chr17	+	4448	5	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-2629	-3	intron_retention	FALSE	canonical	3	2277	junction_4	119.122573427541	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	8897	False	NA	33	True	AATAAA	-17	NA	56622396	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56622507_56622776_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.202	chr17	+	4801	5	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-2629	-6	intron_retention	FALSE	canonical	3	2127	junction_2	162.296603476475	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAGTGGTGGCGCACGT	8897	False	NA	30	True	AATAAA	-14	NA	56622396	56630480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56622507_56622776_56622882_56624003_56625385_56627161_56627283_56627396
ES.15474.203	chr17	+	3755	5	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-2544	-1	intron_retention	FALSE	canonical	3	2231	junction_1	137.062029752955	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	8982	False	NA	35	True	AATAAA	-19	NA	56622481	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.204	chr17	+	5496	29	Fusion	ENSMUSG00000024201.13_ENSMUSG00000001228.15	novel	2775	12	NA	NA	-2236	1	intron_retention	FALSE	canonical	0	0	junction_7	891.774889802148	2921	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	9290	False	NA	13	True	ATTAAA	-29	NA	56622789	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.205	chr17	+	1908	7	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	12655	1	-1023	-1	3prime_fragment	FALSE	canonical	3	2231	junction_1	119.298528443937	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	False	NA	35	True	AATAAA	-19	NA	56624002	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.206	chr17	+	3477	3	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	14068	2	390	-2	intron_retention	FALSE	canonical	3	2277	junction_2	18	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	NA	False	NA	34	True	AATAAA	-18	NA	56625415	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56627283_56627396_56627543_56629020
ES.15474.207	chr17	+	130	1	Intergenic	novelGene_12913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	56626535	56626665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56626500_56626700
ES.15474.208	chr17	+	2549	3	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	15731	-733	2053	733	intron_retention	FALSE	canonical	3	2277	junction_2	18	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56627078	56631219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56627283_56627396_56627543_56629020
ES.15474.209	chr17	+	4890	20	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-40	1	intron_retention	FALSE	canonical	1	2	junction_9	39.7191665114671	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4857	False	NA	13	True	ATTAAA	-29	NA	56633021	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.210	chr17	+	4603	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	34.4730401309163	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4858	False	NA	14	True	ATTAAA	-30	NA	56633022	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.211	chr17	+	4720	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4881	False	NA	18	True	ATTAAA	-34	NA	56633045	56709870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.212	chr17	+	4694	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.7135319325118	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4882	False	NA	14	True	ATTAAA	-30	NA	56633046	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.213	chr17	+	5380	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-10	666	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4887	False	NA	NA	False	NA	NA	NA	56633051	56710536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.214	chr17	+	5254	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	116	junction_1	20.3239077071757	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCACCTGGTCATGGC	4888	False	NA	6	True	ATTAAA	-22	NA	56633052	56709858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.215	chr17	+	5448	10	NNC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	-9	100627	intron_retention	TRUE	non_canonical	0	0	junction_9	68.8607469400079	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAACAAAAAA	4888	False	NA	NA	False	NA	NA	NA	56633052	56810497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56682992_56693082_56693905_56810425
ES.15474.216	chr17	+	4607	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-21	-9	-9	3	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTGTCTTCATTTCT	4888	False	NA	21	True	ATTAAA	-37	NA	56633052	56709873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.217	chr17	+	4680	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	44.1044901245819	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4888	False	NA	12	True	ATTAAA	-28	NA	56633052	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.219	chr17	+	3913	19	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	52.7168068873207	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTCCCACCTGGTCA	4889	False	NA	2	True	ATTAAA	-18	NA	56633053	56709854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703206_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.220	chr17	+	4807	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	1	intron_retention	FALSE	canonical	3	46	junction_12	29.970809683867	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4889	False	NA	13	True	ATTAAA	-29	NA	56633053	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.222	chr17	+	4850	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	2	intron_retention	FALSE	canonical	3	37	junction_1	37.704045423831	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4889	False	NA	14	True	ATTAAA	-30	NA	56633053	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.223	chr17	+	4580	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	35.4617708255333	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4889	False	NA	13	True	ATTAAA	-29	NA	56633053	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.224	chr17	+	2117	10	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	-8	853	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	53.4228415567723	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCGGGTGTCTGCCTGT	4889	False	NA	NA	False	NA	NA	NA	56633053	56693972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
ES.15474.225	chr17	+	5475	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	899	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	34.4730401309163	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCCACTGTGACATCA	4889	False	NA	NA	False	AATAAA	-13	NA	56633053	56710769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.226	chr17	+	4695	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	44.7159909738258	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCATGGCTGTGTCTTCA	4889	False	NA	16	True	ATTAAA	-32	NA	56633053	56709868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.227	chr17	+	2008	9	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-20	15892	-8	853	5prime_fragment	FALSE	canonical	3	116	junction_1	20.6321957144653	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCGGGTGTCTGCCTGT	4889	False	NA	NA	False	NA	NA	NA	56633053	56693972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082
ES.15474.228	chr17	+	5580	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-8	901	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	36.2617093450633	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCCACTGTGACATCATT	4889	False	NA	NA	False	AATAAA	-15	NA	56633053	56710771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222_56708316_56708545
ES.15474.229	chr17	+	5506	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-19	-910	-7	904	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTGACATCATTGGC	4890	False	NA	NA	False	AATAAA	-18	NA	56633054	56710774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.23	chr17	+	4005	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	21	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	603.953912884823	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	441	False	NA	35	True	AATAAA	-19	NA	56610341	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.230	chr17	+	3839	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-3	-823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	53.994223593589	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATGTTTGTCTA	4894	False	NA	NA	False	GATAAA	-19	NA	56633058	56709036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704181_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.231	chr17	+	4554	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	39.6349040598651	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4894	False	NA	13	True	ATTAAA	-29	NA	56633058	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.232	chr17	+	4659	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	50.4026134288063	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4895	False	NA	13	True	ATTAAA	-29	NA	56633059	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.233	chr17	+	4925	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3	junction_21	47.3013025522606	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4895	False	NA	12	True	ATTAAA	-28	NA	56633059	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706953_56707069_56708222
ES.15474.235	chr17	+	4597	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.080927310051	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4897	False	NA	13	True	ATTAAA	-29	NA	56633061	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658625_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.236	chr17	+	4582	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	51.2065175345534	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4897	False	NA	11	True	ATTAAA	-27	NA	56633061	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696256_56696343_56696471_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.237	chr17	+	5146	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_11	46.3687282218965	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4899	False	NA	11	True	ATTAAA	-27	NA	56633063	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700256_56701107_56701768_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.238	chr17	+	4105	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	64.1112314653213	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4899	False	NA	11	True	ATTAAA	-27	NA	56633063	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56685618_56685706_56693082_56693280_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56709002
ES.15474.239	chr17	+	5603	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	901	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCCACTGTGACATCATT	4899	False	NA	NA	False	AATAAA	-15	NA	56633063	56710771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.24	chr17	+	3679	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	21	0	intron_retention	FALSE	canonical	3	1413	junction_6	323.446371993188	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	441	False	NA	36	True	AATAAA	-20	NA	56610341	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627543_56629020_56629126_56629355
ES.15474.240	chr17	+	2382	10	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	2	-3224	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	53.8413306753175	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATGGTGTGAGGGAGC	4899	False	NA	NA	False	NA	NA	NA	56633063	56697561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484
ES.15474.241	chr17	+	4712	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_11	48.713843502159	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4899	False	NA	13	True	ATTAAA	-29	NA	56633063	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696677_56700717_56701107_56701792_56701890_56703203_56703383_56703496_56703693_56703901_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.242	chr17	+	5796	14	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-824	intron_retention	FALSE	canonical	0	0	junction_7	58.8473101947724	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATGTTTGTCT	4899	False	NA	NA	False	GATAAA	-18	NA	56633063	56709035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56682853_56682992_56693082_56693280_56700717_56703693_56703901_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.243	chr17	+	4581	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	38.2503983053973	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCACCTGGTCATGGCT	4899	False	NA	7	True	ATTAAA	-23	NA	56633063	56709859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703591_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222_56708316_56708545
ES.15474.244	chr17	+	5016	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-1	intron_retention	FALSE	canonical	2	17	junction_14	45.5517945463684	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCACCTGGTCATGGC	4899	False	NA	6	True	ATTAAA	-22	NA	56633063	56709858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.245	chr17	+	1595	10	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	2	3655	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	53.8413306753175	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTGGCACCGTGTCCC	4899	False	NA	NA	False	NA	NA	NA	56633063	56696774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484
ES.15474.246	chr17	+	3938	19	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	39.1783276573247	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4899	False	NA	13	True	ATTAAA	-29	NA	56633063	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.247	chr17	+	4665	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_21	39.6260296045695	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4899	False	NA	12	True	ATTAAA	-28	NA	56633063	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.248	chr17	+	4567	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4899	False	NA	13	True	ATTAAA	-29	NA	56633063	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.249	chr17	+	4507	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.0999121493098	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4899	False	NA	13	True	ATTAAA	-29	NA	56633063	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56660056_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.25	chr17	+	5702	13	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	21	0	intron_retention	FALSE	canonical	3	1413	junction_4	339.786166417776	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	441	False	NA	36	True	AATAAA	-20	NA	56610341	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.250	chr17	+	5260	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	688	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACAGATGTTTCCTC	4899	False	NA	NA	False	NA	NA	NA	56633063	56710558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.251	chr17	+	3767	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-10	820	2	-815	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTCTACTGATCAG	4899	False	NA	NA	False	GATAAA	-27	NA	56633063	56709044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.252	chr17	+	3855	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-815	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.7135319325118	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTCTACTGATCAG	4899	False	NA	NA	False	GATAAA	-27	NA	56633063	56709044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.253	chr17	+	3868	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-823	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATGTTTGTCTA	4899	False	NA	NA	False	GATAAA	-19	NA	56633063	56709036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.254	chr17	+	4485	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	47.0313737134977	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4899	False	NA	12	True	ATTAAA	-28	NA	56633063	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.255	chr17	+	9363	21	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	2	4467	intron_retention	FALSE	canonical	3	46	junction_12	30.6985341669598	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTCTGTTCATCA	4899	False	NA	NA	False	NA	NA	NA	56633063	56714337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222
ES.15474.256	chr17	+	4810	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	intron_retention	FALSE	canonical	3	37	junction_1	36.7181863197458	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	13	True	ATTAAA	-29	NA	56633064	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.257	chr17	+	4545	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	43.4635783688837	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	13	True	ATTAAA	-29	NA	56633064	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.258	chr17	+	4659	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	47.6055389066606	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4900	False	NA	12	True	ATTAAA	-28	NA	56633064	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.259	chr17	+	4701	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	intron_retention	FALSE	canonical	3	94	junction_12	22.3263772292194	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	13	True	ATTAAA	-29	NA	56633064	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.26	chr17	+	2784	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-58	757	21	390	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	2567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTTGTTTTTT	441	False	NA	28	True	NA	NA	NA	56610341	56629729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.260	chr17	+	4096	21	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-824	intron_retention	FALSE	canonical	1	2	junction_10	58.3274163665767	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATGTTTGTCT	4900	False	NA	NA	False	GATAAA	-18	NA	56633064	56709035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484_56696673_56700717_56701107_56701789_56701890_56703221_56703383_56703496_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.261	chr17	+	4575	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.3499369474302	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704181_56704311_56704411_56706380_56706567_56706689_56706855_56706953_56707069_56708222_56708316_56708545
ES.15474.262	chr17	+	4573	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	35.6367404896586	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4900	False	NA	14	True	ATTAAA	-30	NA	56633064	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.263	chr17	+	4579	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	51.3105007364215	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCTGGTCATGGCTGT	4900	False	NA	9	True	ATTAAA	-25	NA	56633064	56709861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703591_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.264	chr17	+	4341	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-219	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGACCACAGGAGTCT	4900	False	NA	NA	False	AATAAA	-30	NA	56633064	56709640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.267	chr17	+	3717	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-822	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	43.4635783688837	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGATGTTTGTCTAC	4900	False	NA	NA	False	GATAAA	-20	NA	56633064	56709037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.268	chr17	+	4810	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-211	intron_retention	FALSE	canonical	0	0	junction_11	42.2163113280727	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGGAGTCTCAGGCTGT	4900	False	NA	NA	False	AATAAA	-38	NA	56633064	56709648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700256_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.269	chr17	+	3764	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-802	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	35.6367404896586	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGGTCGAAAGGCACT	4900	False	NA	NA	False	GATAAA	-40	NA	56633064	56709057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.27	chr17	+	6260	13	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	22	-7	intron_retention	FALSE	canonical	3	1446	junction_1	284.687694383395	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCAGTGGTGGCGCACG	442	False	NA	29	True	AATAAA	-13	NA	56610342	56630479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.270	chr17	+	4681	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	94	junction_12	23.5967636813998	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4900	False	NA	13	True	ATTAAA	-29	NA	56633064	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222_56708316_56708545
ES.15474.272	chr17	+	3737	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-823	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCAGATGTTTGTCTA	4900	False	NA	NA	False	GATAAA	-19	NA	56633064	56709036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.273	chr17	+	4484	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3	-206	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTCAGGCTGTGCCCC	4900	False	NA	NA	False	AATAAA	-43	NA	56633064	56709653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.274	chr17	+	4166	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	51.9534108582965	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4901	False	NA	11	True	ATTAAA	-27	NA	56633065	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56709045
ES.15474.275	chr17	+	4941	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_8	48.7040523031072	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGGTCATGGCTGTG	4901	False	NA	10	True	ATTAAA	-26	NA	56633065	56709862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56691706_56691972_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.276	chr17	+	4815	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	4	-2	intron_retention	FALSE	canonical	3	15	junction_13	45.0923753427294	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCATGGCTGTGTCTTCA	4901	False	NA	16	True	ATTAAA	-32	NA	56633065	56709868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.277	chr17	+	3872	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	4	-822	intron_retention	FALSE	canonical	3	94	junction_12	22.3263772292194	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGATGTTTGTCTAC	4901	False	NA	NA	False	GATAAA	-20	NA	56633065	56709037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.278	chr17	+	5348	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_13	46.3931278752531	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCACCTGGTCATGGCT	4901	False	NA	7	True	ATTAAA	-23	NA	56633065	56709859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701890_56703206_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.279	chr17	+	4635	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_14	38.3034784658657	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4902	False	NA	14	True	ATTAAA	-30	NA	56633066	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703591_56703693_56703901_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.28	chr17	+	3981	16	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_5	713.637486558983	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	442	False	NA	36	True	AATAAA	-20	NA	56610342	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.280	chr17	+	4651	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_14	47.5597723614185	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4905	False	NA	12	True	ATTAAA	-28	NA	56633069	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.281	chr17	+	4812	22	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	-3	-2	-3	2	intron_retention	FALSE	canonical	3	94	junction_12	23.3393578228444	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4906	False	NA	14	True	ATTAAA	-30	NA	56633070	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.282	chr17	+	3844	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2	-824	combination_of_known_junctions	FALSE	canonical	3	94	junction_12	23.5967636813998	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCAGATGTTTGTCT	4907	False	NA	NA	False	GATAAA	-18	NA	56633071	56709035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222_56708316_56708545
ES.15474.284	chr17	+	4785	21	NNC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_14	43.134556912063	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCATGGCTGTGTCT	4910	False	NA	13	True	ATTAAA	-29	NA	56633074	56709865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703591_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222
ES.15474.285	chr17	+	4539	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	39.7690907428419	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4910	False	NA	11	True	ATTAAA	-27	NA	56633074	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
ES.15474.286	chr17	+	4395	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.5975181559078	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGGTCATGGCTGTG	4911	False	NA	10	True	ATTAAA	-26	NA	56633075	56709862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56659975_56660160_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.287	chr17	+	4672	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_14	44.648977490266	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4911	False	NA	18	True	ATTAAA	-34	NA	56633075	56709870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.288	chr17	+	4250	20	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.644527131887	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGGTCATGGCTGTG	4915	False	NA	10	True	ATTAAA	-26	NA	56633079	56709862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.289	chr17	+	4630	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_13	50.3698607636147	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	4919	False	NA	11	True	ATTAAA	-27	NA	56633083	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.29	chr17	+	3532	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	693.364431143537	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	444	False	NA	33	True	AATAAA	-17	NA	56610344	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624115_56624997_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.290	chr17	+	4773	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_17	46.2133473077612	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4920	False	NA	14	True	ATTAAA	-30	NA	56633084	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704181_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.291	chr17	+	4636	22	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	30.1066885992581	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCTGGTCATGGCTGT	4920	False	NA	9	True	ATTAAA	-25	NA	56633084	56709861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56707069_56708222_56708316_56708545
ES.15474.293	chr17	+	4455	22	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	42.8309443734126	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGGTCATGGCTGTG	4924	False	NA	10	True	ATTAAA	-26	NA	56633088	56709862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.294	chr17	+	4522	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	45.6938247450868	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCACCTGGTCATGGCTGT	4924	False	NA	9	True	ATTAAA	-25	NA	56633088	56709861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700727_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.296	chr17	+	4757	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	7	2	intron_retention	FALSE	canonical	3	37	junction_1	40.501734479745	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCATGGCTGTGTCTT	4933	False	NA	14	True	ATTAAA	-30	NA	56633097	56709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.297	chr17	+	1731	12	NIC	ENSMUSG00000024201.13	novel	4360	22	NA	NA	38	3663	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	48.5541360980855	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGTGTCCCAGCTTTCT	4964	False	NA	NA	False	NA	NA	NA	56633128	56696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484
ES.15474.298	chr17	+	4607	22	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	47	1	intron_retention	FALSE	canonical	3	15	junction_12	34.2558070618737	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTGTGTCTTCATTT	4973	False	NA	19	True	ATTAAA	-35	NA	56633137	56709871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.299	chr17	+	5348	23	NIC	ENSMUSG00000024201.13	novel	2775	12	NA	NA	18308	898	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	35.3472736157418	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTCCACTGTGACATC	3648	False	NA	NA	False	AATAAA	-12	NA	56651398	56710768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.3	chr17	+	3670	18	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-583	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	575.154349676291	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACGTCTTTAATCTCAG	NA	False	NA	42	True	AATAAA	-26	NA	56609737	56630492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56609796_56610300_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.30	chr17	+	6157	14	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	24	-1	intron_retention	FALSE	canonical	3	1413	junction_5	336.847971959188	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	444	False	NA	35	True	AATAAA	-19	NA	56610344	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.300	chr17	+	3904	17	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-16367	0	intron_retention	FALSE	canonical	1	2	junction_5	44.8950164272161	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCACCTGGTCATGGCT	3232	False	NA	7	True	ATTAAA	-23	NA	56662927	56709859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.301	chr17	+	4103	20	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-16326	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.8498414077285	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	3273	False	NA	12	True	ATTAAA	-28	NA	56662968	56709864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56691706_56691972_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.302	chr17	+	2686	16	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	3643	-815	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	37.8185139845552	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTCTACTGATCAG	2389	False	NA	NA	False	GATAAA	-27	NA	56682937	56709044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.303	chr17	+	2876	1	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-9420	853	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCGGGTGTCTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	56691096	56693972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56691100_56694000
ES.15474.304	chr17	+	3806	15	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-4214	688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.0656120634962	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACAGATGTTTCCTC	NA	False	NA	NA	False	NA	NA	NA	56696302	56710558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703274_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545_56710296_56710350
ES.15474.305	chr17	+	6573	11	NNC	ENSMUSG00000024201.13	novel	2775	12	NA	NA	-3159	-1	intron_retention	FALSE	canonical	1	3	junction_9	52.8071964792679	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGTCATGGCTGTGT	619	False	NA	11	True	ATTAAA	-27	NA	56697357	56709863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706953_56707069_56708222
ES.15474.306	chr17	+	7619	9	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	-2678	688	intron_retention	FALSE	canonical	3	123	junction_1	17.6560011044404	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACAGATGTTTCCTC	1100	False	NA	NA	False	NA	NA	NA	56697838	56710558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56701890_56703203_56703383_56703496_56703693_56703901_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.307	chr17	+	3685	12	NIC	ENSMUSG00000024201.13	novel	2775	12	NA	NA	199	688	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	33.1438138525761	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACAGATGTTTCCTC	3977	False	NA	NA	False	NA	NA	NA	56700715	56710558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ES.15474.308	chr17	+	3240	6	ISM	ENSMUSG00000024201.13	ENSMUST00000141507.2	2775	12	3145	-898	3145	898	intron_retention	FALSE	canonical	3	139	junction_3	10.9068785635488	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTCCACTGTGACATC	7326	False	NA	NA	False	AATAAA	-12	NA	56704064	56710768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222
ES.15474.309	chr17	+	4561	1	Genic_Genomic	ENSMUSG00000024201.13	novel	NA	NA	NA	NA	5056	666	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9237	False	NA	NA	False	NA	NA	NA	56705975	56710536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_56706000_56710500
ES.15474.310	chr17	+	3840	2	ISM	ENSMUSG00000024201.13	ENSMUST00000141507.2	2775	12	5705	-688	5705	688	intron_retention	FALSE	canonical	3	150	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGACAGATGTTTCCTC	9886	False	NA	NA	False	NA	NA	NA	56706624	56710558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56706855_56706948
ES.15474.311	chr17	+	165	1	Intergenic	novelGene_12915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGTCAATTGAAAGA	2530	False	NA	NA	False	NA	NA	NA	56796440	56796605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56796400_56796600
ES.15474.34	chr17	+	5307	14	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	30	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	641.836953249198	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	450	False	NA	33	True	AATAAA	-17	NA	56610350	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.35	chr17	+	3472	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	572.661573133513	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	460	False	NA	36	True	AATAAA	-20	NA	56610360	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.36	chr17	+	3842	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	1446	junction_1	287.869416611783	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	466	False	NA	35	True	AATAAA	-19	NA	56610366	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.37	chr17	+	3747	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	590.347130402952	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.38	chr17	+	4216	15	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	268	junction_4	566.862093152348	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	470	False	NA	35	True	AATAAA	-19	NA	56610370	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.39	chr17	+	3609	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1446	junction_1	281.52718439887	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	470	False	NA	36	True	AATAAA	-20	NA	56610370	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.4	chr17	+	3668	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	-82	0	-82	0	multi-exon	FALSE	canonical	3	1413	junction_6	319.856779473251	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	338	False	NA	36	True	AATAAA	-20	NA	56610238	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.42	chr17	+	3527	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	588.707665011889	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	475	False	NA	35	True	AATAAA	-19	NA	56610375	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624115_56624997_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.45	chr17	+	3496	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	585.627651408085	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	491	False	NA	35	True	AATAAA	-19	NA	56610391	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627265_56627396_56627543_56629020_56629126_56629355
ES.15474.46	chr17	+	3452	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	588.707665011889	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	491	False	NA	35	True	AATAAA	-19	NA	56610391	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624051_56624992_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.47	chr17	+	3646	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	585.985198058577	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	491	False	NA	35	True	AATAAA	-19	NA	56610391	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629223
ES.15474.48	chr17	+	6184	13	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1446	junction_1	289.653276924901	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	491	False	NA	36	True	AATAAA	-20	NA	56610391	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56620252_56622191_56622316_56622398_56622507_56622776_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.49	chr17	+	3502	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	593.065048998632	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAGTGGTGGCGCACGT	492	False	NA	30	True	AATAAA	-14	NA	56610392	56630480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616342_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.5	chr17	+	3848	16	ISM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	-33	1	-33	-1	intron_retention	FALSE	canonical	3	1413	junction_6	325.707776320363	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	387	False	NA	35	True	AATAAA	-19	NA	56610287	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.50	chr17	+	3696	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	697.905479698899	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGTGGTGGCGCACGTC	492	False	NA	31	True	AATAAA	-15	NA	56610392	56630481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.51	chr17	+	3577	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	268	junction_4	537.438103929704	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.52	chr17	+	3348	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	597.874999941924	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.54	chr17	+	3471	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	690.257198441277	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627265_56627396_56627543_56629020_56629126_56629355
ES.15474.55	chr17	+	5123	14	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	630.566515268227	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56617837_56619053_56619421_56619803_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.57	chr17	+	5171	15	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	624.827800767735	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.59	chr17	+	3399	16	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	836.46697218453	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619057_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622754_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.6	chr17	+	3578	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-91	-4	-12	4	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCACGTCTTTAATCTC	408	False	NA	40	True	AATAAA	-24	NA	56610308	56630490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.60	chr17	+	3604	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	598.536570868202	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGTGGCGCACGTCT	492	False	NA	32	True	AATAAA	-16	NA	56610392	56630482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627385_56627543_56629020_56629126_56629355
ES.15474.61	chr17	+	3245	16	NIC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	720.32213781212	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	492	False	NA	34	True	AATAAA	-18	NA	56610392	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.62	chr17	+	3551	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	592.860069915322	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTGGCGCACGTCTTT	492	False	NA	34	True	AATAAA	-18	NA	56610392	56630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616297_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.63	chr17	+	3719	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	-7	1	-7	-1	intron_retention	FALSE	canonical	3	348	junction_6	516.463831152665	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	492	False	NA	35	True	AATAAA	-19	NA	56610392	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.67	chr17	+	3401	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	59	junction_9	587.657594938489	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	499	False	NA	35	True	AATAAA	-19	NA	56610399	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.68	chr17	+	3396	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	23	junction_8	591.459400316051	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	499	False	NA	33	True	AATAAA	-17	NA	56610399	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.69	chr17	+	3497	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	59	junction_9	600.279038005983	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	499	False	NA	35	True	AATAAA	-19	NA	56610399	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.7	chr17	+	4407	15	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	-6	0	intron_retention	FALSE	canonical	3	268	junction_4	566.515976862803	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	414	False	NA	36	True	AATAAA	-20	NA	56610314	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.70	chr17	+	3293	16	NIC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	595.788739589984	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	499	False	NA	33	True	AATAAA	-17	NA	56610399	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.71	chr17	+	9558	10	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1413	junction_3	387.070765852677	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	500	False	NA	35	True	AATAAA	-19	NA	56610400	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56619968_56620040_56622316_56622398_56622507_56622776_56622882_56624003_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.72	chr17	+	4020	15	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	608.327503932558	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	500	False	NA	36	True	AATAAA	-20	NA	56610400	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.73	chr17	+	6396	12	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	675.456380763443	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	500	False	NA	35	True	AATAAA	-19	NA	56610400	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619421_56619803_56619968_56620040_56620252_56622191_56622882_56624003_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.74	chr17	+	4899	14	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	626.837785609208	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	500	False	NA	35	True	AATAAA	-19	NA	56610400	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.75	chr17	+	4195	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1413	junction_5	323.863893369686	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	500	False	NA	35	True	AATAAA	-19	NA	56610400	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.76	chr17	+	3389	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	3	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	710.439960517425	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTAAGGGTTGTGTTTT	502	False	NA	15	True	ACTAAA	-30	NA	56610402	56630395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620055_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.77	chr17	+	3494	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	586.258631999351	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGGTGGCGCACGTCT	502	False	NA	32	True	AATAAA	-16	NA	56610402	56630482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629026_56629126_56629355
ES.15474.78	chr17	+	3450	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	592.430784459248	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	502	False	NA	33	True	AATAAA	-17	NA	56610402	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617726_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.79	chr17	+	3504	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	772.59428478917	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	502	False	NA	36	True	AATAAA	-20	NA	56610402	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56619968_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.82	chr17	+	3450	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	712.286097277632	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGGGCAGTGGTGGCG	506	False	NA	25	True	AATAAA	-9	NA	56610406	56630475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624065_56624974_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.83	chr17	+	3674	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	800.719207962442	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	507	False	NA	33	True	AATAAA	-17	NA	56610407	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619421_56619803_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.85	chr17	+	3396	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	684.780849980488	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGGCGCACGTCTT	509	False	NA	33	True	AATAAA	-17	NA	56610409	56630483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.86	chr17	+	3618	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	692.044003184588	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	510	False	NA	35	True	AATAAA	-19	NA	56610410	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629208
ES.15474.87	chr17	+	3821	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1413	junction_6	332.015528589387	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	510	False	NA	35	True	AATAAA	-19	NA	56610410	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.88	chr17	+	3643	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	587.414022964212	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	510	False	NA	36	True	AATAAA	-20	NA	56610410	56630486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629208
ES.15474.9	chr17	+	4465	14	NIC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	16	-1	intron_retention	FALSE	canonical	3	348	junction_5	543.98453249852	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	436	False	NA	35	True	AATAAA	-19	NA	56610336	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.91	chr17	+	2015	14	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	34	-2137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	631.684664047576	2509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAAGCGCCCGGCCA	533	False	NA	NA	False	NA	NA	NA	56610433	56627202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620256_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161
ES.15474.92	chr17	+	3426	18	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	575.748809848116	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	533	False	NA	35	True	AATAAA	-19	NA	56610433	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355_56629427_56629472
ES.15474.94	chr17	+	4917	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	36	-1	intron_retention	FALSE	canonical	3	1413	junction_5	333.175545137321	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	535	False	NA	35	True	AATAAA	-19	NA	56610435	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020
ES.15474.95	chr17	+	3381	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	706.32592512239	2580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	541	False	NA	35	True	AATAAA	-19	NA	56610441	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612159_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.97	chr17	+	5267	15	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	43	-8	intron_retention	FALSE	canonical	3	1413	junction_4	321.510378478499	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCAGTGGTGGCGCAC	542	False	NA	28	True	AATAAA	-12	NA	56610442	56630478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.98	chr17	+	3747	16	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	43	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	592.353550583508	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	542	False	NA	35	True	AATAAA	-19	NA	56610442	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619421_56619803_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ES.15474.99	chr17	+	4669	14	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1413	junction_6	339.765181703813	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	542	False	NA	35	True	AATAAA	-19	NA	56610442	56630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56625385_56627161_56627283_56627396_56627543_56629020
ES.15475.1	chr17	-	3979	10	Fusion	ENSMUSG00000024197.11_ENSMUSG00000047123.9	novel	3645	8	NA	NA	6	-145	multi-exon	TRUE	canonical	0	0	junction_2	259.150940335055	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCGTCACCACACTC	NA	False	NA	NA	False	AATAAA	-21	NA	56597505	56576463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_56579218_56583693_56583743_56586938_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.10	chr17	-	2851	2	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	8160	-1486	intron_retention	FALSE	canonical	3	665	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56589351	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587868_56588406
ES.15475.11	chr17	-	2253	9	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	-1486	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	267.086333186481	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56597509	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56587074_56587741_56587868_56588406_56588607_56590700_56590797_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.13	chr17	-	6463	6	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	-1488	intron_retention	FALSE	canonical	3	548	junction_5	47.6378001171339	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGGATGGTGTATATG	NA	False	NA	-7	True	AATAAA	-19	NA	56597509	56585963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.15	chr17	-	4678	7	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	-1491	intron_retention	FALSE	canonical	3	548	junction_6	43.9042518821735	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAAGTGGATGGTGTAT	NA	False	NA	-10	True	AATAAA	-16	NA	56597509	56585966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.16	chr17	-	2402	8	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	-11	-1493	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	222.022153702494	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCCAAGTGGATGGTGT	NA	False	NA	-12	True	AATAAA	-14	NA	56597522	56585968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597214
ES.15475.18	chr17	-	1862	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2	1781	2	-1781	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGGTTTCTCTGTATA	NA	False	NA	76	True	NA	NA	NA	56597509	56586256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.2	chr17	-	3592	7	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	247	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	232.846694916061	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTGTATAAAACCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	56597509	56584228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56588607_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.20	chr17	-	1670	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	-30	2005	-30	-2005	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTAGTCTGTCATCCTG	NA	False	NA	NA	False	AATGAA	-8	NA	56597541	56586480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.21	chr17	-	1767	8	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	-44	-2005	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	222.022153702494	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTAGTCTGTCATCCTG	9911	False	NA	NA	False	AATGAA	-8	NA	56599917	56586480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56599732
ES.15475.24	chr17	-	3365	7	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	-2057	intron_retention	FALSE	canonical	3	37	junction_1	215.664605863415	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	56597509	56586532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56587071_56587741_56587868_56588406_56588607_56591132_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.3	chr17	-	3759	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	-11	-103	-11	103	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTGTGTTGTGTCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	56597522	56584372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.5	chr17	-	3943	7	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	0	-1484	intron_retention	FALSE	canonical	3	548	junction_6	43.8545575992077	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGTGTATATGTGTG	NA	False	NA	-3	True	AATAAA	-23	NA	56597511	56585959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.6	chr17	-	2185	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	-26	1486	-26	-1486	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56597537	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.7	chr17	-	1859	7	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2	-1486	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	232.846694916061	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56597509	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56587074_56587741_56587868_56588406_56588607_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ES.15475.8	chr17	-	2121	8	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	2441	-1486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	222.369062596396	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56595070	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56595050
ES.15475.9	chr17	-	2223	8	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	426	-1486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	222.369062596396	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATGGTGTATATGTG	NA	False	NA	-5	True	AATAAA	-21	NA	56599447	56585961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56599325
ES.15476.1	chr17	-	1017	3	FSM	ENSMUSG00000073380.3	ENSMUST00000097303.3	1056	3	32	7	12	-7	multi-exon	FALSE	canonical	1	1	junction_2	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAACTCTGAGTTGTCT	2742	False	NA	NA	False	ATTAAA	-13	NA	56607254	56601117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56601665_56604826_56605033_56606990
ES.15476.2	chr17	-	774	2	NIC	ENSMUSG00000073380.3	novel	1056	3	NA	NA	49	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAACTCTGAGTTGTCT	2779	False	NA	NA	False	ATTAAA	-13	NA	56607217	56601117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56601665_56606990
ES.15476.3	chr17	-	5059	2	NNC	ENSMUSG00000073380.3	novel	1056	3	NA	NA	-3722	-4373	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56611008	56605740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56608546_56608754
ES.15476.4	chr17	-	181	1	Intergenic	novelGene_12911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1244	False	NA	NA	False	NA	NA	NA	56608752	56608571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56608600_56608800
ES.15476.5	chr17	-	154	1	Intergenic	novelGene_12912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAAAATAAATATTAA	1056	False	NA	NA	False	NA	NA	NA	56608940	56608786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56608800_56608900
ES.15477.1	chr17	-	3634	1	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATCCCAATGTTCTG	2541	False	NA	NA	False	NA	NA	NA	56624341	56620707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56620700_56624300
ES.15477.2	chr17	-	4366	6	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATCCCAATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	56627413	56620707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56622314_56622396_56622505_56622774_56625149_56625244_56625382_56627158_56627281_56627394
ES.15477.3	chr17	-	3551	2	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATCCCAATGTTCTG	2541	False	NA	NA	False	NA	NA	NA	56624341	56620707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56622314_56622396
ES.15477.4	chr17	-	2365	8	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATCCCAATGTTCTG	NA	False	NA	NA	False	NA	NA	NA	56627413	56620707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56622314_56622396_56622505_56622774_56622881_56624002_56624113_56624991_56625149_56625244_56625382_56627158_56627281_56627394
ES.15477.5	chr17	-	2512	2	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATCCCAATGTTCTG	2541	False	NA	NA	False	NA	NA	NA	56624341	56620707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56622881_56624002
ES.15477.7	chr17	-	3350	2	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAGAGCAA	2541	False	NA	NA	False	NA	NA	NA	56624341	56620721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56622505_56622774
ES.15477.8	chr17	-	602	1	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTGTGAGCCCTAAGGA	2541	False	NA	NA	False	NA	NA	NA	56624341	56623739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56623700_56624300
ES.15478.1	chr17	-	6265	1	Intergenic	novelGene_12914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTGGCACCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	56650240	56643975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56644000_56650200
ES.15478.2	chr17	-	2514	2	Antisense	novelGene_ENSMUSG00000024201.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTGGCACCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	56650240	56643975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56646264_56650014
ES.15479.1	chr17	-	7403	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	0	639	intron_retention	FALSE	non_canonical	0	0	junction_13	85.5062660865415	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGACAAGTAGTGACAGC	NA	False	NA	NA	False	CATAAA	-22	NA	56783389	56718786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.11	chr17	-	5617	28	NNC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	83.8777770418451	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTGCTCCTTAA	NA	False	NA	-1	True	ATTAAA	-20	NA	56769225	56719426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.12	chr17	-	6862	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	85.5062660865415	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTGCTCCTTAA	NA	False	NA	-1	True	ATTAAA	-20	NA	56783488	56719426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.13	chr17	-	6825	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	91.9271077112405	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTGCTCCTTAA	NA	False	NA	-1	True	ATTAAA	-20	NA	56783411	56719426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732286_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.14	chr17	-	5861	29	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	92.7072691599857	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTGCTCCTTAA	NA	False	NA	-1	True	ATTAAA	-20	NA	56769163	56719426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.15	chr17	-	5781	25	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	182	-1	intron_retention	FALSE	canonical	2	3	junction_14	88.6387702826603	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGGAGTGCTCCTTAA	NA	False	NA	-1	True	ATTAAA	-20	NA	56742803	56719426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728992_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609
ES.15479.17	chr17	-	5380	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	101.481630170207	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56783404	56719427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56744879_56754359_56754471_56758651_56758839_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.18	chr17	-	6796	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_13	85.5062660865415	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56783427	56719427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729124_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.21	chr17	-	5561	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.732380567259	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56783412	56719427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724504_56724588_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.22	chr17	-	5427	24	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	90.8031377754518	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56741984	56719427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728863_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880
ES.15479.24	chr17	-	5562	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	90.732380567259	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGGAGTGCTCCTTA	NA	False	NA	-2	True	ATTAAA	-19	NA	56783401	56719427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726727_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.25	chr17	-	4299	18	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-242	2	intron_retention	FALSE	non_canonical	0	0	junction_4	98.9560386123791	534	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56732703	56719428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721794_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879
ES.15479.27	chr17	-	6760	33	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.3815965168388	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56783520	56719428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56735967_56736098_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.28	chr17	-	6801	33	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-22	2	intron_retention	FALSE	non_canonical	0	0	junction_13	105.802582782451	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCATGGAGTGCTCCTT	NA	False	NA	-3	True	ATTAAA	-18	NA	56783411	56719428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734790_56734818_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765200_56765378_56783339
ES.15479.29	chr17	-	5592	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	91.8589154990029	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56783427	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731291_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.3	chr17	-	6847	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_13	88.9197512615283	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56769236	56719425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.30	chr17	-	6714	33	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	100.639745619897	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56769199	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732286_56732927_56733386_56733505_56734938_56735133_56735851_56735967_56736098_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.31	chr17	-	2797	14	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	550	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.852940966791	534	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56729207	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721057_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128
ES.15479.32	chr17	-	7224	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-18	1	intron_retention	FALSE	non_canonical	0	0	junction_13	102.785431619339	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56769179	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56745468_56745558_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.33	chr17	-	5275	26	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	7172	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.9041140100911	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56761989	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742009_56742604_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873
ES.15479.34	chr17	-	7744	20	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1272	1	intron_retention	TRUE	non_canonical	0	0	junction_11	122.53648899709	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCATGGAGTGCTCCT	NA	False	NA	-4	True	ATTAAA	-17	NA	56737554	56719429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734790_56734818_56734938_56737293_56737517
ES.15479.35	chr17	-	6594	31	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_13	97.0383715627769	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783427	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732286_56732927_56733386_56733456_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.36	chr17	-	6681	19	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-538	0	intron_retention	FALSE	non_canonical	0	0	junction_13	79.4166229450737	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56735532	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386
ES.15479.37	chr17	-	6999	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	24	0	intron_retention	FALSE	non_canonical	0	0	junction_13	100.424178407099	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783415	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728362_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731273_56731885_56732163_56732286_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.38	chr17	-	5557	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	91.1833047313399	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783403	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758641_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.39	chr17	-	7129	31	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	23	0	intron_retention	FALSE	non_canonical	0	0	junction_13	92.2979775870884	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783416	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732921_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.4	chr17	-	5675	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	79.1614661493084	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56783518	56719425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.40	chr17	-	7099	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_13	92.1638363824584	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783445	56719430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732638_56732702_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.45	chr17	-	6236	29	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	91.5318264599917	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783473	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720777_56723990_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.47	chr17	-	5075	21	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	231	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	106.238069918462	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56736051	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724200_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729124_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851
ES.15479.48	chr17	-	5524	28	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	88.256749159998	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783382	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721097_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.5	chr17	-	8944	21	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	1613	0	intron_retention	FALSE	non_canonical	0	0	junction_12	105.525577468214	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56740072	56719425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56737302_56737525
ES.15479.51	chr17	-	6781	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	92.9310442222024	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783427	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730384_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.52	chr17	-	4184	19	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-227	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	114.020087032564	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56732688	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731291_56731879_56732163_56732286
ES.15479.53	chr17	-	6864	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	4791	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	92.8306616252042	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56776836	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56776680
ES.15479.54	chr17	-	5757	29	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	99.7368156598113	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783521	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729124_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56745468_56745558_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.55	chr17	-	6975	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	92.1638363824584	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	False	NA	-6	True	ATTAAA	-15	NA	56783381	56719431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732163_56732286_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.57	chr17	-	5755	28	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	332	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	89.4898358866711	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56768829	56719432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56768563
ES.15479.59	chr17	-	6163	31	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_13	95.0124904069635	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56769159	56719432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.6	chr17	-	5582	28	NNC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.1829903165638	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56769198	56719425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721097_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.62	chr17	-	5572	28	NNC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	104.573534618761	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56769159	56719432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754350_56754479_56758641_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ES.15479.64	chr17	-	5349	27	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	3863	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	91.1939217324639	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56765298	56719432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731231_56731892_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191
ES.15479.69	chr17	-	6836	33	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_14	84.2058431668343	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56783446	56719432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728863_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.74	chr17	-	6736	32	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	91.7155263472492	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTAGTGCATGGAGTGC	NA	False	NA	-8	True	ATTAAA	-13	NA	56783378	56719433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736149_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.76	chr17	-	6946	33	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	100.903685318909	535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTAGTGCATGGAGTGC	NA	False	NA	-8	True	ATTAAA	-13	NA	56783431	56719433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56763481_56763630_56765191_56765378_56783339
ES.15479.77	chr17	-	5458	27	NNC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	97.4567192664391	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCTAGTGCATGGAGTG	NA	False	NA	-9	True	ATTAAA	-12	NA	56769220	56719434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56765191_56765378_56769103
ES.15479.78	chr17	-	3543	20	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	155	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.401243583021	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCTAGTGCATGGAGTG	NA	False	NA	-9	True	ATTAAA	-12	NA	56741530	56719434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56719629_56719745_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452
ES.15479.79	chr17	-	5725	27	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-1	-1784	intron_retention	FALSE	non_canonical	0	0	junction_8	82.5795743188021	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCTGTAGTTACTGT	NA	False	NA	NA	False	NA	NA	NA	56783445	56723463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.8	chr17	-	6313	31	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-55	0	intron_retention	FALSE	non_canonical	0	0	junction_13	91.7245635342876	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56783538	56719425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.80	chr17	-	8388	15	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	-2273	-1785	intron_retention	FALSE	non_canonical	0	0	junction_8	104.985713313765	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGCTGTAGTTACTG	NA	False	NA	NA	False	NA	NA	NA	56738555	56723464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56737293_56737517
ES.15479.81	chr17	-	4476	23	NNC	ENSMUSG00000013236.18	novel	5588	28	NA	NA	24	-1785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	78.3256077311008	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGCTGTAGTTACTG	NA	False	NA	NA	False	NA	NA	NA	56783415	56723464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.82	chr17	-	6089	26	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	15	-1792	intron_retention	FALSE	non_canonical	0	0	junction_8	81.2382569975501	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTGGCTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	56783468	56723471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.15479.83	chr17	-	5168	26	NNC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	3	2286	intron_retention	FALSE	non_canonical	0	0	junction_7	83.8726272391655	500	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTTGCACTGGCCC	NA	False	NA	NA	False	AATAAA	-12	NA	56783386	56724127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728361_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ES.1548.1	chr1	+	179	1	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGTAATCTATTCGT	NA	False	NA	NA	False	NA	NA	NA	150896147	150896326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_150896100_150896300
ES.15480.1	chr17	-	214	1	Intergenic	novelGene_12916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGAACAGGGAGGGTT	NA	False	NA	NA	False	NA	NA	NA	56856848	56856634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56856600_56856800
ES.15481.1	chr17	+	3500	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	-343	-51	-109	51	multi-exon	TRUE	canonical	3	422	junction_6	66.4862955803675	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAGGTGATGCCTATT	7719	False	NA	86	True	NA	NA	NA	56891715	56913345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.10	chr17	+	5025	19	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	66	-1	intron_retention	FALSE	canonical	3	80	junction_1	125.421462317566	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7894	False	NA	34	True	AATAAA	-25	NA	56891890	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.12	chr17	+	3159	22	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	129.939773245923	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7916	False	NA	34	True	AATAAA	-25	NA	56891912	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892044_56892135_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.13	chr17	+	3332	20	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	-8	2	intron_retention	FALSE	canonical	3	97	junction_18	119.435027365396	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCCTTTACTTCAGAC	7969	False	NA	23	True	AATAAA	-14	NA	56891965	56913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912864_56912975
ES.15481.14	chr17	+	3114	23	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.950712029594	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7969	False	NA	34	True	AATAAA	-25	NA	56891965	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892044_56892186_56892351_56892861_56892921_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.17	chr17	+	8630	18	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_5	188.497299274844	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGACTTTCAACCTC	7985	False	NA	33	True	AATAAA	-24	NA	56891981	56913292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892044_56892135_56892351_56895781_56895867_56900689_56900755_56900834_56901280_56901316_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.18	chr17	+	3185	20	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_5	138.1675485349	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7986	False	NA	34	True	AATAAA	-25	NA	56891982	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902747_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.19	chr17	+	3140	21	NNC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_4	165.546753214915	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7986	False	NA	35	True	AATAAA	-26	NA	56891982	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56900994_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.2	chr17	+	3256	22	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	-55	4	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	120.113627231518	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTCAACCTCTCATTT	7773	False	NA	39	True	AATAAA	-30	NA	56891769	56913298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.21	chr17	+	3170	21	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	137.850090678244	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7987	False	NA	34	True	AATAAA	-25	NA	56891983	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907831_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.22	chr17	+	4408	19	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	-3	intron_retention	FALSE	canonical	3	453	junction_5	56.9260946044394	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCAGACTTTCAACCT	7987	False	NA	32	True	AATAAA	-23	NA	56891983	56913291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.23	chr17	+	4404	19	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	2	1	intron_retention	FALSE	canonical	3	97	junction_16	121.525603155147	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCCCTTTACTTCAGA	7987	False	NA	22	True	AATAAA	-13	NA	56891983	56913281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.24	chr17	+	9653	13	NNC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	210.268264499319	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7987	False	NA	34	True	AATAAA	-25	NA	56891983	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901280_56901316_56907433_56907821_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56912400_56912796_56912864_56912975
ES.15481.25	chr17	+	3117	20	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	-1	intron_retention	FALSE	canonical	3	4	junction_4	139.623117564566	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7987	False	NA	34	True	AATAAA	-25	NA	56891983	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.26	chr17	+	3032	22	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	150.811876926926	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCCTTTACTTCAGAC	7987	False	NA	23	True	AATAAA	-14	NA	56891983	56913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.27	chr17	+	4754	21	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	137.901513769792	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901280_56901316_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.29	chr17	+	3175	21	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_14	138.089997827504	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909975_56910528_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.3	chr17	+	5035	20	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	35	0	intron_retention	TRUE	canonical	0	0	junction_4	140.745128284193	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7863	False	NA	35	True	AATAAA	-26	NA	56891859	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901280_56901316_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912658_56912796_56912864_56912975
ES.15481.30	chr17	+	6484	18	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	503	junction_2	51.1413672711904	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7987	False	NA	35	True	AATAAA	-26	NA	56891983	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.31	chr17	+	4753	18	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	4	-4	intron_retention	FALSE	canonical	3	30	junction_5	135.760602445889	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTCAGACTTTCAACC	7989	False	NA	31	True	AATAAA	-22	NA	56891985	56913290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.32	chr17	+	2501	21	NNC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	218.408424745933	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTCAGACTTTCAAC	7995	False	NA	30	True	AATAAA	-21	NA	56891991	56913289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892044_56892135_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908446_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.34	chr17	+	6061	19	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	23	0	intron_retention	FALSE	canonical	3	457	junction_5	56.4850029260472	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	8008	False	NA	35	True	AATAAA	-26	NA	56892004	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.37	chr17	+	8329	16	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	24	-2	intron_retention	FALSE	canonical	0	0	junction_4	150.832121542094	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGACTTTCAACCTC	8009	False	NA	33	True	AATAAA	-24	NA	56892005	56913292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901280_56901316_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912864_56912975
ES.15481.4	chr17	+	3246	20	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	36	-1	intron_retention	FALSE	canonical	3	4	junction_4	168.984239295249	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7864	False	NA	34	True	AATAAA	-25	NA	56891860	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.41	chr17	+	2566	20	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	25	1	intron_retention	FALSE	canonical	0	0	junction_9	200.282515144423	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCCCTTTACTTCAGA	8010	False	NA	22	True	AATAAA	-13	NA	56892006	56913281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908055_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.42	chr17	+	4545	18	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	25	0	intron_retention	FALSE	canonical	3	453	junction_5	58.3513994103722	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	8010	False	NA	35	True	AATAAA	-26	NA	56892006	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912658_56912796_56912864_56912975
ES.15481.45	chr17	+	3171	21	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	29	-1	intron_retention	FALSE	canonical	0	0	junction_10	138.03691535238	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	8014	False	NA	34	True	AATAAA	-25	NA	56892010	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908029_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.46	chr17	+	7625	19	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	29	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	141.851730973742	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	8014	False	NA	34	True	AATAAA	-25	NA	56892010	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901266_56901304_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.47	chr17	+	6279	17	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	37	-1	intron_retention	FALSE	canonical	3	457	junction_5	57.9455226376465	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	8022	False	NA	34	True	AATAAA	-25	NA	56892018	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56906221_56906622_56906673_56907337_56907433_56907821_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912658_56912796_56912864_56912975
ES.15481.49	chr17	+	2968	21	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	131	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	135.522129189295	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	8193	False	NA	34	True	AATAAA	-25	NA	56892189	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912662_56912806_56912864_56912975
ES.15481.5	chr17	+	3361	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	-112	-127	37	52	multi-exon	FALSE	canonical	3	97	junction_18	119.307543768196	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGGTGATGCCTATTC	7865	False	NA	87	True	NA	NA	NA	56891861	56913346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.50	chr17	+	3061	21	NNC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	360	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.05487133745	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCCTTTACTTCAGAC	8422	False	NA	23	True	AATAAA	-14	NA	56892418	56913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56892678_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.52	chr17	+	7492	15	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	-631	0	intron_retention	FALSE	canonical	0	0	junction_1	158.789489705132	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	NA	False	NA	35	True	AATAAA	-26	NA	56900882	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56901280_56901316_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.53	chr17	+	5906	14	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	-543	-1	intron_retention	FALSE	canonical	3	511	junction_4	50.4542677688882	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	NA	False	NA	34	True	AATAAA	-25	NA	56900970	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56901042_56902651_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.54	chr17	+	6020	15	NIC	ENSMUSG00000071054.13	novel	3122	21	NA	NA	481	-1	intron_retention	FALSE	canonical	3	97	junction_12	136.935334060591	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	NA	False	NA	34	True	AATAAA	-25	NA	56901994	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ES.15481.55	chr17	+	5292	12	NIC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	-1427	4	intron_retention	FALSE	canonical	3	511	junction_3	54.2130782306232	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTTTACTTCAGACTT	NA	False	NA	25	True	AATAAA	-16	NA	56903342	56913284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912658_56912796_56912864_56912975
ES.15481.57	chr17	+	3528	8	NIC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	1021	2	intron_retention	FALSE	canonical	3	523	junction_2	52.7063486088106	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCCTTTACTTCAGAC	NA	False	NA	23	True	AATAAA	-14	NA	56905790	56913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56906673_56907337_56908131_56908226_56908532_56909876_56909984_56910531_56910823_56911145_56911409_56912283_56912864_56912975
ES.15481.58	chr17	+	2184	15	NNC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	1060	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	160.36503321345	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGACTTTCAACCTC	NA	False	NA	33	True	AATAAA	-24	NA	56905829	56913292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909990_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.59	chr17	+	2747	11	NIC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	-1772	-1	intron_retention	FALSE	canonical	3	511	junction_2	53.3614092767423	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	NA	False	NA	34	True	AATAAA	-25	NA	56906624	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912864_56912975
ES.15481.6	chr17	+	4790	19	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	46	0	intron_retention	FALSE	canonical	3	30	junction_5	134.192843087113	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7874	False	NA	35	True	AATAAA	-26	NA	56891870	56913294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.60	chr17	+	1581	11	NNC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	-433	-1	intron_retention	FALSE	canonical	0	0	junction_3	186.856121119968	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	NA	False	NA	34	True	AATAAA	-25	NA	56907963	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56908131_56908226_56908367_56908442_56908536_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.61	chr17	+	912	7	NNC	ENSMUSG00000071054.13	novel	3628	14	NA	NA	-679	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	236.476508112093	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCCTTTACTTCAGAC	NA	False	NA	23	True	AATAAA	-14	NA	56910679	56913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912650_56912791_56912864_56912975
ES.15481.8	chr17	+	2561	21	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	58	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	163.134790893911	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7886	False	NA	34	True	AATAAA	-25	NA	56891882	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15481.9	chr17	+	2699	20	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	63	-1	intron_retention	FALSE	canonical	3	30	junction_6	132.182992439666	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	7891	False	NA	34	True	AATAAA	-25	NA	56891887	56913293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ES.15482.1	chr17	-	6749	4	NNC	ENSMUSG00000110218.2	novel	1269	4	NA	NA	-6063	-6	intron_retention	TRUE	non_canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGATCCTGCTGTGACCT	6990	False	NA	NA	False	AATAAA	-14	NA	56867450	56858419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56859997_56860448_56863790_56865403_56866721_56866936
ES.15482.10	chr17	-	1903	12	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	57.0280487752074	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	0	True	AATAAA	-29	NA	56891512	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870544_56881199_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.11	chr17	-	4563	17	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	10	junction_11	62.5239641557539	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	0	True	AATAAA	-29	NA	56891589	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.13	chr17	-	5117	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	-2	intron_retention	FALSE	canonical	3	101	junction_14	45.7256751753565	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	0	True	AATAAA	-29	NA	56891560	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.14	chr17	-	6737	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	31	junction_14	54.2194694279823	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	0	True	AATAAA	-29	NA	56891589	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.15	chr17	-	4708	7	NIC	ENSMUSG00000042625.17	novel	2523	18	NA	NA	668	-2	intron_retention	FALSE	canonical	3	156	junction_6	36.7952291593474	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	6086	False	NA	0	True	AATAAA	-29	NA	56877770	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874625_56875894
ES.15482.16	chr17	-	4293	19	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-81	-2	intron_retention	FALSE	canonical	1	4	junction_7	59.78944537105	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	NA	False	NA	0	True	AATAAA	-29	NA	56891382	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873571_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.17	chr17	-	5405	3	NNC	ENSMUSG00000042625.17	novel	886	7	NA	NA	-88	-2	intron_retention	FALSE	canonical	2	2	junction_2	77	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCTGCTGCCAGGCA	5330	False	NA	0	True	AATAAA	-29	NA	56878526	56869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56874625_56875894_56876023_56877933
ES.15482.18	chr17	-	3353	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_2	62.8953314219859	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTTCTGCTGCCAGGC	NA	False	NA	-1	True	AATAAA	-28	NA	56891548	56869941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870432_56870511_56870619_56871499_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.19	chr17	-	4554	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	101	junction_15	44.5784438301853	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTTCTGCTGCCAGGC	NA	False	NA	-1	True	AATAAA	-28	NA	56891598	56869941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.2	chr17	-	10106	11	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-323	4622	intron_retention	FALSE	canonical	0	0	junction_1	72.5650742437435	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAATGTGTGTTGCC	1014	False	NA	NA	False	NA	NA	NA	56882842	56863342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56866721_56866936_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902
ES.15482.20	chr17	-	4693	7	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-366	-4	intron_retention	FALSE	canonical	3	139	junction_6	46.7974358271904	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	3992	False	NA	-2	True	AATAAA	-27	NA	56879864	56869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874625_56875894_56876023_56878209
ES.15482.21	chr17	-	2541	19	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.5520882943256	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	NA	False	NA	-2	True	AATAAA	-27	NA	56891600	56869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870508_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.22	chr17	-	4250	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	10	-4	intron_retention	FALSE	canonical	3	31	junction_15	57.7400517859736	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	NA	False	NA	-2	True	AATAAA	-27	NA	56891575	56869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.23	chr17	-	3429	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-38	-4	intron_retention	FALSE	canonical	3	72	junction_14	53.7949322598524	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	NA	False	NA	-2	True	AATAAA	-27	NA	56891623	56869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.25	chr17	-	3325	6	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1060	-4	intron_retention	FALSE	canonical	3	187	junction_5	29.7455879081251	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTTCTGCTGCCAGG	8482	False	NA	-2	True	AATAAA	-27	NA	56875374	56869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56871635_56872218_56872262_56872944_56873083_56873325_56874016_56874532
ES.15482.27	chr17	-	3561	11	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-1001	5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	70.293954220829	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	3357	False	NA	-3	True	AATAAA	-26	NA	56880499	56869943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56875894_56876023_56878209_56878320_56878399
ES.15482.28	chr17	-	4492	3	NIC	ENSMUSG00000042625.17	novel	886	7	NA	NA	486	5	intron_retention	FALSE	canonical	3	156	junction_2	36.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	7908	False	NA	-3	True	AATAAA	-26	NA	56875948	56869943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56873083_56873325_56874625_56875894
ES.15482.3	chr17	-	4254	21	NNC	ENSMUSG00000042625.17	novel	2523	18	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_1	70.4755276674109	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTAGTTTTTATTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	56891563	56867970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56868207_56869250_56869454_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.30	chr17	-	3284	21	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.2068383188185	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTGCTGCCAG	NA	False	NA	-3	True	AATAAA	-26	NA	56891562	56869943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878164_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885650_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.31	chr17	-	5211	9	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-193	4	intron_retention	FALSE	canonical	0	0	junction_4	75.7842331887049	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTGCTGCCA	4986	False	NA	-4	True	AATAAA	-25	NA	56878870	56869944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870432_56870511_56871635_56872218_56872262_56872944_56873083_56873321_56873617_56873878_56874016_56874532_56874625_56875894_56878320_56878399
ES.15482.32	chr17	-	6152	15	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	6	4	intron_retention	FALSE	canonical	3	31	junction_11	56.8290041641213	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTGCTGCCA	NA	False	NA	-4	True	AATAAA	-25	NA	56891518	56869944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.34	chr17	-	2281	15	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-310	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	66.7911762472394	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	1027	False	NA	-5	True	AATAAA	-24	NA	56882829	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873571_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354
ES.15482.35	chr17	-	11032	13	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	3	intron_retention	FALSE	canonical	3	31	junction_9	60.7350804724913	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891560	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56878320_56878399_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.36	chr17	-	2814	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	3	intron_retention	FALSE	canonical	3	24	junction_12	64.4994031784839	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891585	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.37	chr17	-	3401	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-43	3	intron_retention	FALSE	canonical	3	14	junction_10	75.9648555568849	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891628	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874019_56874532_56874625_56875894_56876023_56878204_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885636_56885986_56889983_56890072_56891273
ES.15482.38	chr17	-	8377	12	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	3	intron_retention	FALSE	canonical	3	101	junction_9	54.2222241039305	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891585	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56874625_56875894_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885640_56885986_56889983_56890072_56891273
ES.15482.39	chr17	-	2467	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-13	3	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	73.2579578957926	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891537	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.4	chr17	-	4763	13	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-140	2	intron_retention	FALSE	canonical	0	0	junction_7	66.8137440119089	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTAGTTTTTATTTTCC	1197	False	NA	NA	False	ATTAAA	-17	NA	56882659	56867970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874421_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902
ES.15482.40	chr17	-	4612	19	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-47	3	intron_retention	FALSE	canonical	0	0	junction_15	68.63386936995	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891632	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878204_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884929_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.42	chr17	-	4128	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	7	3	intron_retention	FALSE	canonical	3	78	junction_14	48.9638342423458	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891578	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.44	chr17	-	2562	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	55.588067433553	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891535	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.45	chr17	-	2567	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	58.7840312233672	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891518	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881975_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.46	chr17	-	4716	17	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	3	intron_retention	FALSE	non_canonical	0	0	junction_10	69.7506440382453	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891560	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878552_56881201_56881303_56881902_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.48	chr17	-	4363	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-9	3	intron_retention	FALSE	canonical	2	2	junction_10	67.6229566488184	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891533	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56877933_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.49	chr17	-	2632	18	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	3	intron_retention	FALSE	canonical	3	10	junction_11	77.7234472733638	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891583	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878204_56878320_56878399_56878550_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.5	chr17	-	5342	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-2	2	intron_retention	FALSE	canonical	3	72	junction_14	53.7949322598524	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTAGTTTTTATTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	56891564	56867970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.51	chr17	-	4363	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	3	intron_retention	FALSE	canonical	3	10	junction_12	60.8665225227616	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	False	NA	-5	True	AATAAA	-24	NA	56891512	56869945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.52	chr17	-	5206	17	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-9	2	intron_retention	FALSE	canonical	3	31	junction_13	56.4877959717849	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAAGGTTTCTGCTGC	NA	False	NA	-6	True	AATAAA	-23	NA	56891533	56869946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.53	chr17	-	4427	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_8	68.6507635473935	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAAGGTTTCTGCTGC	NA	False	NA	-6	True	AATAAA	-23	NA	56891561	56869946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874019_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.55	chr17	-	5278	16	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	41	0	intron_retention	FALSE	canonical	3	14	junction_9	62.680636740721	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56890005	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874625_56875894_56876023_56878204_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983
ES.15482.56	chr17	-	2617	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	80.7316954374145	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891544	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878143_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885824_56885920_56885986_56889983_56890072_56891273
ES.15482.57	chr17	-	4950	17	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-10	0	intron_retention	FALSE	canonical	3	15	junction_6	75.1668976345306	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891534	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874019_56874532_56874625_56875894_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.59	chr17	-	3266	22	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	62.7678297658501	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891842	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273_56891502_56891759
ES.15482.6	chr17	-	995	7	NNC	ENSMUSG00000042625.17	novel	2523	18	NA	NA	424	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.009463713836	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTAGTTTTTATTTTCC	849	False	NA	NA	False	ATTAAA	-17	NA	56873591	56867970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56868207_56870361_56870432_56870511_56870619_56871499_56871635_56872218_56872262_56872944_56873083_56873325
ES.15482.60	chr17	-	5437	17	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	101	junction_13	43.9366998504667	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891529	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.63	chr17	-	4654	18	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	31	junction_14	54.8562134333854	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891583	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.64	chr17	-	4695	17	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_10	72.5929361232896	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891523	56869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878204_56878320_56878399_56878570_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.65	chr17	-	3359	20	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	62.8953314219859	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAGACAAGGTTTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	56891523	56869950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870432_56870511_56870663_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.67	chr17	-	2358	16	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-287	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	78.567904105656	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTGTAAGACAAGGT	1050	False	NA	-15	True	AATAAA	-14	NA	56882806	56869955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881022_56881087_56881201_56881303_56881902_56881953_56882354
ES.15482.68	chr17	-	2222	16	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	-3288	-7	intron_retention	FALSE	canonical	3	24	junction_13	68.1740908752487	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTGTAAGACAAGGT	NA	False	NA	-15	True	AATAAA	-14	NA	56885807	56869955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636
ES.15482.69	chr17	-	2555	8	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	429	-7	intron_retention	FALSE	canonical	3	156	junction_7	35.8050275799363	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTGTAAGACAAGGT	7851	False	NA	-15	True	AATAAA	-14	NA	56876005	56869955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56871635_56872218_56872262_56872944_56873083_56873325_56874016_56874532_56874625_56875894
ES.15482.7	chr17	-	3220	21	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.316405372191	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891549	56869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885824_56885920_56885986_56889983_56890072_56891273
ES.15482.71	chr17	-	5504	12	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	9223	17	157	-7	intron_retention	FALSE	canonical	3	139	junction_10	36.9171509336494	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTGTAAGACAAGGT	1494	False	NA	-15	True	AATAAA	-14	NA	56882362	56869955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399
ES.15482.73	chr17	-	4413	19	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_15	58.3495215633056	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTGTAAGACAAGGT	NA	False	NA	-15	True	AATAAA	-14	NA	56891523	56869955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885692_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.76	chr17	-	6588	17	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	-9	intron_retention	FALSE	canonical	3	10	junction_11	62.2015059604669	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTGTTTGTAAGACAAG	NA	False	NA	-17	True	AATAAA	-12	NA	56891562	56869957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56878320_56878399_56878550_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.77	chr17	-	3325	18	ISM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	63	966	2	-600	5prime_fragment	FALSE	canonical	3	72	junction_12	52.8728317019235	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTTTAGCTGTGGATC	NA	False	NA	NA	False	AGTAAA	-17	NA	56891522	56870904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.78	chr17	-	4870	8	NIC	ENSMUSG00000042625.17	novel	1804	12	NA	NA	-4	37	intron_retention	FALSE	canonical	3	31	junction_4	48.5705882280246	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAGACATATGCAAGC	NA	False	NA	NA	False	NA	NA	NA	56891589	56877043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56878320_56878399_56878550_56881201_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.79	chr17	-	7506	7	NIC	ENSMUSG00000042625.17	novel	1804	12	NA	NA	2	27	intron_retention	FALSE	canonical	3	31	junction_3	49.6286207747102	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAAAGAACAGAC	NA	False	NA	NA	False	NA	NA	NA	56891583	56877053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56878320_56878399_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.8	chr17	-	3644	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	-367	0	-367	0	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891952	56869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.82	chr17	-	6919	8	NIC	ENSMUSG00000042625.17	novel	1090	10	NA	NA	-15	27	intron_retention	FALSE	canonical	3	101	junction_4	28.407386219727	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAAAGAACAGAC	NA	False	NA	NA	False	NA	NA	NA	56891600	56877053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56878320_56878399_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.83	chr17	-	4233	9	NIC	ENSMUSG00000042625.17	novel	1090	10	NA	NA	-4	27	intron_retention	FALSE	canonical	3	101	junction_5	28.3480047798782	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAAAGAACAGAC	NA	False	NA	NA	False	NA	NA	NA	56891566	56877053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ES.15482.85	chr17	-	9343	3	FSM	ENSMUSG00000042625.17	ENSMUST00000146070.2	439	3	-118	-8786	-44	-6	multi-exon	FALSE	canonical	3	127	junction_1	4	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56891629	56877086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56885986_56889983_56890072_56891273
ES.15482.86	chr17	-	2461	5	ISM	ENSMUSG00000042625.17	ENSMUST00000133604.8	1804	12	8243	1096	-762	-6	internal_fragment	FALSE	canonical	3	78	junction_4	43.9566547862778	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	575	False	NA	NA	False	NA	NA	NA	56883281	56877086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354
ES.15482.87	chr17	-	3581	2	FSM	ENSMUSG00000042625.17	ENSMUST00000134497.2	572	2	-2267	-742	1153	-203	multi-exon	FALSE	canonical	3	192	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGGGCTCGGAATCTC	2912	False	NA	NA	False	ACTAAA	-29	NA	56880944	56877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56878320_56878399
ES.15482.88	chr17	-	2310	4	NIC	ENSMUSG00000042625.17	novel	1804	12	NA	NA	-3436	1429	intron_retention	FALSE	canonical	3	31	junction_2	55.5957632278656	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTCTCTCTTGTCCTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	56885955	56881901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56883906_56884842_56884906_56885636_56885845_56885920
ES.15483.1	chr17	-	2550	1	Antisense	novelGene_ENSMUSG00000071054.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	56911546	56908996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56909000_56911500
ES.15484.1	chr17	-	813	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-56	-2	-56	2	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGCTTGGATAGGAAAG	NA	False	NA	-30	True	TTTAAA	-29	NA	56916827	56914449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ES.15484.2	chr17	-	813	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-224	166	-224	2	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGGTTTTCTGGTGGGGG	NA	False	NA	-23	True	AATAAA	-20	NA	56916995	56914617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ES.15484.3	chr17	-	624	4	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	canonical	3	297	junction_2	811.365241771889	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCGGTTTTCTGGTG	NA	False	NA	-27	True	AATAAA	-16	NA	56916827	56914621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56914842_56915637_56915693_56915862_56916024_56916639
ES.15484.4	chr17	-	505	4	NNC	ENSMUSG00000049760.7	novel	755	4	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	950.562757294623	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCGGTTTTCTGGT	NA	False	NA	-28	True	AATAAA	-15	NA	56916701	56914622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56914842_56915637_56915684_56915845_56916024_56916639
ES.15485.1	chr17	+	2341	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	-1954	-4	-1954	4	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTATGTGTGAGCTC	NA	False	NA	3	True	AATAAA	-16	NA	56918461	56921247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ES.15485.2	chr17	+	409	4	NNC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	5016.45339524516	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTGTGTATGTGTG	NA	False	NA	-2	True	AATAAA	-11	NA	56920415	56921242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56920449_56920558_56920681_56920906_56921042_56921123
ES.15485.3	chr17	+	379	4	NNC	ENSMUSG00000057863.7	novel	383	4	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4584.99225735442	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTGTATGTGTGAGC	NA	False	NA	1	True	AATAAA	-14	NA	56920417	56921245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56920449_56920585_56920681_56920906_56921042_56921127
ES.15485.4	chr17	+	828	1	Genic_Genomic	ENSMUSG00000057863.7	novel	NA	NA	NA	NA	2	2	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTGTATGTGTGAGC	NA	False	NA	1	True	AATAAA	-14	NA	56920417	56921245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_56920400_56921200
ES.15485.5	chr17	+	732	2	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	16	2	intron_retention	FALSE	canonical	3	9970	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTGTATGTGTGAGC	NA	False	NA	1	True	AATAAA	-14	NA	56920431	56921245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56921042_56921123
ES.15485.6	chr17	+	494	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	28	2	intron_retention	FALSE	canonical	3	9970	junction_2	629.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTGTATGTGTGAGC	NA	False	NA	1	True	AATAAA	-14	NA	56920443	56921245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56920681_56920906_56921042_56921123
ES.15485.7	chr17	+	346	2	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	41	2	combination_of_known_splicesites	FALSE	canonical	2	151	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTGTATGTGTGAGC	NA	False	NA	1	True	AATAAA	-14	NA	56920456	56921245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56920681_56921123
ES.15486.1	chr17	-	3023	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	-65	-7	-65	7	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTCAGTGTCGCC	1506	False	NA	-5	True	AATAAA	-24	NA	56933952	56921289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.10	chr17	-	5342	10	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-24	2	intron_retention	FALSE	canonical	3	584	junction_7	70.1787840333178	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCCTGAGTCTCAGTG	1547	False	NA	-10	True	AATAAA	-19	NA	56933911	56921294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56923043_56923129_56923253_56923358_56923447_56924753_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.12	chr17	-	3145	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	193.925323621925	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933286
ES.15486.13	chr17	-	3795	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-42	0	intron_retention	FALSE	canonical	3	584	junction_13	78.8957117550335	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1529	False	NA	-12	True	AATAAA	-17	NA	56933929	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.14	chr17	-	3671	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	584	junction_14	79.502923491844	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1566	False	NA	-12	True	AATAAA	-17	NA	56933892	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.15	chr17	-	3066	18	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	193.925323621925	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.16	chr17	-	5111	1	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	7468	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	763	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	9051	False	NA	-12	True	AATAAA	-17	NA	56926407	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921300_56926400
ES.15486.17	chr17	-	2865	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	199.50904584755	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1573	False	NA	-12	True	AATAAA	-17	NA	56933885	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.18	chr17	-	4435	15	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-39	0	intron_retention	FALSE	canonical	1	2	junction_3	209.430435092078	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1532	False	NA	-12	True	AATAAA	-17	NA	56933926	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922199_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.19	chr17	-	4329	15	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	584	junction_12	80.3762834347017	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1573	False	NA	-12	True	AATAAA	-17	NA	56933885	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.2	chr17	-	3547	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	5	intron_retention	FALSE	canonical	3	584	junction_14	76.1265393933023	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGAGTCTCAGTGTCG	1573	False	NA	-7	True	AATAAA	-22	NA	56933885	56921291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.20	chr17	-	4884	12	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-26	0	intron_retention	FALSE	canonical	3	584	junction_9	89.559620476165	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1545	False	NA	-12	True	AATAAA	-17	NA	56933913	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.21	chr17	-	2757	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	268.49056263158	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1573	False	NA	-12	True	AATAAA	-17	NA	56933885	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.22	chr17	-	6550	10	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_7	97.037729711975	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56923043_56923129_56923253_56923358_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.23	chr17	-	4217	16	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	204.996216767259	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1573	False	NA	-12	True	AATAAA	-17	NA	56933885	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922605_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.24	chr17	-	4704	4	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	7624	0	intron_retention	FALSE	canonical	3	760	junction_3	82.5873275186131	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	9207	False	NA	-12	True	AATAAA	-17	NA	56926251	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56923253_56923358
ES.15486.25	chr17	-	3329	5	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	8390	0	intron_retention	FALSE	canonical	3	748	junction_4	18.2534243362718	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	9973	False	NA	-12	True	AATAAA	-17	NA	56925485	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56922416_56922503_56922645_56922925_56923253_56923358_56924933_56925317
ES.15486.26	chr17	-	3659	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	199.499216790443	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.28	chr17	-	3816	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_9	199.55684301409	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1573	False	NA	-12	True	AATAAA	-17	NA	56933885	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56925085_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.29	chr17	-	2926	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	301.672890515492	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926389_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929153_56929433_56929554_56930136_56930211_56933480
ES.15486.30	chr17	-	5546	8	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	584	junction_5	66.2225684448178	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1581	False	NA	-12	True	AATAAA	-17	NA	56933877	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56923253_56923358_56923447_56924753_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.31	chr17	-	3550	10	NNC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	6319	0	intron_retention	FALSE	non_canonical	0	0	junction_1	241.65545312426	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	7902	False	NA	-12	True	AATAAA	-17	NA	56927556	56921296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921801_56921871_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513
ES.15486.32	chr17	-	4137	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_10	199.426012282751	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	1573	False	NA	-15	True	AATAAA	-14	NA	56933885	56921299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925894_56926010_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.33	chr17	-	3737	13	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	4418	-3	intron_retention	FALSE	canonical	3	584	junction_12	62.9432614873639	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCCTAAGCCTGAGTCT	6001	False	NA	-15	True	AATAAA	-14	NA	56929457	56921299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433
ES.15486.34	chr17	-	3226	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_16	197.183765812503	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933286
ES.15486.36	chr17	-	3797	16	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	1	2	junction_3	202.545139001985	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922199_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.37	chr17	-	2040	10	NNC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	8176	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	261.349253105429	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	9759	False	NA	-16	True	AATAAA	-13	NA	56925699	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56925131_56925317
ES.15486.39	chr17	-	4808	13	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-26	-4	intron_retention	FALSE	canonical	3	584	junction_10	86.8652772337077	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1545	False	NA	-16	True	AATAAA	-13	NA	56933913	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.40	chr17	-	3710	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	1	2	junction_3	199.061302979133	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922199_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.41	chr17	-	6994	7	NNC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	-21	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	270.315710481898	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1550	False	NA	-16	True	AATAAA	-13	NA	56933908	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56923253_56923358_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933366
ES.15486.43	chr17	-	2945	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	193.582792566526	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1528	False	NA	-16	True	AATAAA	-13	NA	56933930	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926348_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.44	chr17	-	3146	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_16	197.183765812503	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1574	False	NA	-16	True	AATAAA	-13	NA	56933884	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.45	chr17	-	3591	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-25	-4	intron_retention	FALSE	canonical	2	7	junction_6	195.341647825035	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1546	False	NA	-16	True	AATAAA	-13	NA	56933912	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923069_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.46	chr17	-	3588	17	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	1	2	junction_3	198.874607164917	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922199_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.47	chr17	-	6706	8	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	584	junction_5	55.3840027002567	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1571	False	NA	-16	True	AATAAA	-13	NA	56933887	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56923253_56923358_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.48	chr17	-	4552	13	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	584	junction_10	64.3693228348895	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1577	False	NA	-16	True	AATAAA	-13	NA	56933881	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.49	chr17	-	3732	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	3	584	junction_13	81.093252219624	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.5	chr17	-	4346	15	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	3	intron_retention	FALSE	canonical	0	0	junction_10	211.783305213954	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCTGAGTCTCAGTGT	1573	False	NA	-9	True	AATAAA	-20	NA	56933885	56921293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927351_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.50	chr17	-	4406	15	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	3	584	junction_12	79.5235814082842	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.51	chr17	-	2128	13	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	284.719842808486	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1571	False	NA	-16	True	AATAAA	-13	NA	56933887	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.52	chr17	-	3155	7	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	7181	-4	intron_retention	FALSE	canonical	3	748	junction_6	68.209033289017	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	8764	False	NA	-16	True	AATAAA	-13	NA	56926694	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317
ES.15486.53	chr17	-	4534	15	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	3	584	junction_12	80.871307441805	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.54	chr17	-	4370	15	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-28	-4	intron_retention	FALSE	canonical	3	584	junction_12	78.2061965810476	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1543	False	NA	-16	True	AATAAA	-13	NA	56933915	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.55	chr17	-	4272	15	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_2	211.399080954888	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921801_56921873_56922092_56922302_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.56	chr17	-	2939	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	193.668035458817	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927519_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.59	chr17	-	3106	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	193.600791413636	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926010_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.6	chr17	-	2937	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	193.596376756967	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCTGAGTCTCAGTGT	1573	False	NA	-9	True	AATAAA	-20	NA	56933885	56921293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923373_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.60	chr17	-	5546	14	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_7	285.138728822579	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56925085_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.61	chr17	-	2939	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	184.467511979152	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921879_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.62	chr17	-	3784	13	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	3648	-4	intron_retention	FALSE	canonical	3	584	junction_11	89.3140526457063	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	5231	False	NA	-16	True	AATAAA	-13	NA	56930227	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136
ES.15486.64	chr17	-	3784	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_16	199.760628237273	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1564	False	NA	-16	True	AATAAA	-13	NA	56933894	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.66	chr17	-	3105	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-4	intron_retention	FALSE	canonical	3	584	junction_13	57.3032479203598	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1573	False	NA	-16	True	AATAAA	-13	NA	56933885	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.67	chr17	-	3058	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-39	-4	intron_retention	FALSE	canonical	3	584	junction_14	78.5590691374968	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	1532	False	NA	-16	True	AATAAA	-13	NA	56933926	56921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.68	chr17	-	3553	5	NIC	ENSMUSG00000041168.11	novel	4362	16	NA	NA	8667	-5	intron_retention	FALSE	canonical	3	760	junction_4	73.494897782091	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCCTAAGCCTGAGT	NA	False	NA	-17	True	AATAAA	-12	NA	56925208	56921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921801_56921873_56922416_56922503_56923043_56923129_56923253_56923358
ES.15486.69	chr17	-	4622	14	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-5	intron_retention	FALSE	canonical	3	584	junction_11	80.6031259029415	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCCTAAGCCTGAGT	1571	False	NA	-17	True	AATAAA	-12	NA	56933887	56921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.7	chr17	-	4393	16	FSM	ENSMUSG00000041168.11	ENSMUST00000233732.2	4362	16	-28	-3	-16	3	multi-exon	FALSE	canonical	0	0	junction_15	205.931854963939	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCTGAGTCTCAGTGT	1555	False	NA	-9	True	AATAAA	-20	NA	56933903	56921293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ES.15486.70	chr17	-	2969	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	256.711112255994	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCCTAAGCCTGAGT	1571	False	NA	-17	True	AATAAA	-12	NA	56933887	56921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926956_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933486
ES.15486.71	chr17	-	2937	18	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	193.834660039235	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCCTAAGCCTGAGT	1571	False	NA	-17	True	AATAAA	-12	NA	56933887	56921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927567_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.72	chr17	-	3725	12	NNC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	-5	intron_retention	FALSE	canonical	1	26	junction_5	207.787200426679	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCCCTAAGCCTGAGT	1571	False	NA	-17	True	AATAAA	-12	NA	56933887	56921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926965_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.73	chr17	-	2802	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	197.849335038054	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGCCCTAAGCCTGAG	1573	False	NA	-18	True	AATAAA	-11	NA	56933885	56921302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.76	chr17	-	6583	8	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	584	junction_5	62.4934282259229	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGCCCTAAGCCTGAG	1564	False	NA	-18	True	AATAAA	-11	NA	56933894	56921302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56922645_56922925_56923253_56923358_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.79	chr17	-	716	1	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	2	-11873	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCCTTATGTATCTTT	1573	False	NA	NA	False	NA	NA	NA	56933885	56933169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56933200_56933900
ES.15486.8	chr17	-	3061	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-35	2	intron_retention	FALSE	canonical	3	584	junction_14	61.0348261241072	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCCTGAGTCTCAGTG	1536	False	NA	-10	True	AATAAA	-19	NA	56933922	56921294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15486.9	chr17	-	4321	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	-60	2	intron_retention	FALSE	canonical	3	584	junction_13	78.4682242836055	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCCTGAGTCTCAGTG	1511	False	NA	-10	True	AATAAA	-19	NA	56933947	56921294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ES.15487.1	chr17	+	2145	18	NNC	ENSMUSG00000040828.11	novel	1617	12	NA	NA	-1052	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.11764705882353	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGATCAGGTTGCTAAG	2387	False	NA	11	True	AATAAA	-12	NA	56934090	56971453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56934146_56938535_56938591_56939289_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56962096_56962187_56962988_56963048_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.10	chr17	+	250	1	Intergenic	novelGene_12918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAATAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	56949809	56950059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56949800_56950100
ES.15487.11	chr17	+	1614	12	NNC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	-4045	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.53999672333955	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	NA	False	NA	10	True	AATAAA	-11	NA	56954736	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56954812_56958774_56958891_56960579_56960757_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.12	chr17	+	1603	11	NIC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	-4016	83	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3.92428337406972	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTTGTCCTGGCTCCC	NA	False	NA	97	True	NA	NA	NA	56954765	56971539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56954812_56958794_56958891_56959456_56959540_56960579_56960757_56962096_56962187_56962988_56963048_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.13	chr17	+	3444	5	NIC	ENSMUSG00000040828.11	novel	1617	12	NA	NA	5917	3	intron_retention	FALSE	canonical	3	10	junction_1	2.29128784747792	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTTGCTAAGTGCCAA	NA	False	NA	17	True	AATAAA	-18	NA	56964698	56971459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.2	chr17	+	2102	17	NNC	ENSMUSG00000040828.11	novel	1617	12	NA	NA	3924	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.63092188706945	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	7371	False	NA	10	True	AATAAA	-11	NA	56939074	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56939143_56939289_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56962096_56962187_56962988_56963048_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.3	chr17	+	2221	19	NNC	ENSMUSG00000040828.11	novel	1617	12	NA	NA	3963	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.89523292065736	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATCAGGTTGCTAAGT	7410	False	NA	12	True	AATAAA	-13	NA	56939113	56971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56939143_56939289_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959564_56960579_56960757_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.4	chr17	+	2308	20	NNC	ENSMUSG00000040828.11	novel	1617	12	NA	NA	3964	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.65931437805657	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	7411	False	NA	10	True	AATAAA	-11	NA	56939114	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56939143_56939289_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56961434_56961549_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.5	chr17	+	2299	18	NIC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	4006	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	2.97277147493959	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	7453	False	NA	10	True	AATAAA	-11	NA	56939156	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.6	chr17	+	2273	17	NIC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	4014	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	3.43693177121688	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	7461	False	NA	10	True	AATAAA	-11	NA	56939164	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56961434_56961549_56962096_56962187_56962988_56963048_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.7	chr17	+	2404	19	NIC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	4017	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	3.30917169151898	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATCAGGTTGCTAAGT	7464	False	NA	12	True	AATAAA	-13	NA	56939167	56971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56958891_56959456_56959540_56960579_56960757_56961434_56961549_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.8	chr17	+	4000	17	NIC	ENSMUSG00000040828.11	novel	2557	22	NA	NA	4025	-2	intron_retention	FALSE	canonical	1	3	junction_8	3.42782730020052	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGGATCAGGTTGCTAA	7472	False	NA	10	True	AATAAA	-11	NA	56939175	56971452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56939367_56940509_56940583_56943270_56943336_56948476_56948591_56954727_56954812_56957742_56957894_56958794_56960757_56961434_56961549_56962096_56962187_56962988_56963048_56965072_56965152_56966528_56966582_56967170_56967246_56968241_56968371_56969661_56969846_56970267_56970426_56971033
ES.15487.9	chr17	+	183	1	Intergenic	novelGene_12917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	56944009	56944192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_56944000_56944200
ES.15488.1	chr17	-	1425	4	Antisense	novelGene_ENSMUSG00000040828.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAGAAAGGTTTCCGT	NA	False	NA	NA	False	AAGAAA	-19	NA	56971194	56939950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56941123_56967234_56967284_56968073_56968167_56971083
ES.15488.2	chr17	-	1525	4	Antisense	novelGene_ENSMUSG00000040828.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCCTTTGGGTCATACT	NA	False	NA	NA	False	NA	NA	NA	56971313	56964219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56965373_56967234_56967284_56968073_56968167_56971083
ES.15488.3	chr17	-	1072	4	Antisense	novelGene_ENSMUSG00000040828.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAACCAATCAGAT	NA	False	NA	NA	False	NA	NA	NA	56971357	56965892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56966549_56967234_56967284_56968073_56968167_56971083
ES.15489.1	chr17	+	5227	11	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-90	0	intron_retention	FALSE	canonical	3	32	junction_5	157.758074278308	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980203	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57017778_57017855
ES.15489.10	chr17	+	3062	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-13	0	intron_retention	FALSE	canonical	3	371	junction_2	28.0978610559304	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980280	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.11	chr17	+	3203	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-13	0	intron_retention	FALSE	canonical	3	371	junction_2	29.2218816530856	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980280	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57017231_57017590_57017778_57017855
ES.15489.12	chr17	+	2746	18	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	149.65172948686	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980323	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.13	chr17	+	2268	14	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	113.12066134738	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980350	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.16	chr17	+	2205	14	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	102.716822196416	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980363	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.17	chr17	+	4488	12	ISM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	9	0	0	0	intron_retention	FALSE	canonical	3	371	junction_2	30.1722328700353	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980366	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170
ES.15489.18	chr17	+	5022	12	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	371	junction_2	30.0162490430029	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980366	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57017778_57017855
ES.15489.19	chr17	+	2236	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	-7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_12	111.02022246383	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	False	NA	NA	False	ATTAAA	-7	NA	56980366	57018757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57017087_57017231_57017590_57017778_57017855
ES.15489.2	chr17	+	2407	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-66	-3	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	98.1330833145292	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980227	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.21	chr17	+	2470	17	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	131.633249978871	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980367	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57006107_57006218_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.22	chr17	+	2919	16	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	3	-3	intron_retention	FALSE	canonical	3	89	junction_2	112.981296387204	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980369	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.23	chr17	+	2546	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	3	-3	intron_retention	FALSE	canonical	3	6	junction_4	134.013365834241	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980369	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57006107_57006218_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590
ES.15489.24	chr17	+	2399	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	107.40155181995	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980369	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013820_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.25	chr17	+	4080	13	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	371	junction_2	28.8352600512328	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980372	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57017778_57017855
ES.15489.26	chr17	+	2458	16	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	3	44	junction_6	138.068807322855	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	False	NA	NA	False	ATTAAA	-7	NA	56980373	57018757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.27	chr17	+	3722	14	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	371	junction_2	28.2036130129146	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980373	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57017231_57017590_57017778_57017855
ES.15489.29	chr17	+	4224	12	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	7	junction_7	118.168670597345	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	56980373	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57009891_57012456_57012571_57013861_57013966_57014167_57014239_57014850_57015281_57016213_57016335_57017087_57017231_57017590
ES.15489.3	chr17	+	2506	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	-130	-3	-66	3	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACTCTTTTGCACCTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	56980227	57018767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.30	chr17	+	2571	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	371	junction_2	29.4417446244378	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980373	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.31	chr17	+	2371	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.699375836425	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	56980373	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015152_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.33	chr17	+	3058	15	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-2	0	intron_retention	FALSE	canonical	2	7	junction_12	109.704263865194	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980378	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57016993_57017231_57017590_57017778_57017855
ES.15489.34	chr17	+	2592	17	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	166.062864602535	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980381	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.35	chr17	+	2624	18	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	151.010139671934	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980382	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_56995097_56995176_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.36	chr17	+	2511	18	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	160.417146526342	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCCCCAGACTCTTTT	NA	False	NA	NA	False	ATTAAA	-9	NA	56980382	57018759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56991774_56991880_56992765_56992829_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.37	chr17	+	2658	18	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.874016510901	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTTGCACCTGGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	56980382	57018769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_56999268_56999373_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.38	chr17	+	2677	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_6	104.599341404343	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	56980382	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008875_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.4	chr17	+	3218	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-62	-3	intron_retention	FALSE	canonical	3	6	junction_4	135.893324175824	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980231	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57006107_57006218_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.40	chr17	+	2533	16	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.847935670145	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	False	NA	NA	False	ATTAAA	-7	NA	56980385	57018757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003684_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015172_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.42	chr17	+	2429	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	106.028172356847	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980392	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57016993_57017231_57017590_57017778_57017855
ES.15489.43	chr17	+	2646	18	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	155.002823950165	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980392	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57006107_57006218_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.44	chr17	+	3130	15	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-10731	-4	intron_retention	FALSE	canonical	3	89	junction_1	119.212402621437	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	2599	False	NA	NA	False	ATTAAA	-10	NA	56993003	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.45	chr17	+	2396	14	ISM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	12646	3	-10731	-3	intron_retention	FALSE	canonical	3	371	junction_1	27.5195465766968	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	2599	False	NA	NA	False	ATTAAA	-11	NA	56993003	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590
ES.15489.46	chr17	+	2336	15	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-10731	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	111.424358894732	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	2599	False	NA	NA	False	ATTAAA	-11	NA	56993003	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015152_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.47	chr17	+	5056	15	NNC	ENSMUSG00000002372.10	novel	542	2	NA	NA	-7411	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	134.404886330028	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	5919	False	NA	NA	False	ATTAAA	-10	NA	56996323	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56996884_56997844_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017778_57017855
ES.15489.48	chr17	+	3248	10	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	4303	-4	intron_retention	FALSE	canonical	3	378	junction_6	25.3382061590402	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCCCAGACTCTTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	57008037	57018760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57017778_57017855
ES.15489.49	chr17	+	3288	4	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	10548	-3	intron_retention	FALSE	canonical	3	392	junction_1	24.6891789161883	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	2506	False	NA	NA	False	ATTAAA	-11	NA	57014282	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.5	chr17	+	3311	16	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-61	0	intron_retention	FALSE	canonical	3	89	junction_2	115.170520919586	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980232	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.7	chr17	+	3007	18	NNC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	-46	-3	intron_retention	FALSE	canonical	1	3	junction_2	176.858221323825	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980247	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57006107_57006218_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590
ES.15489.8	chr17	+	2459	16	NNC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	107.641916659925	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCAGACTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	56980280	57018761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012583_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.15489.9	chr17	+	2651	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	-84	0	-13	0	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980280	57018764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ES.1549.1	chr1	+	8787	11	Fusion	ENSMUSG00000097426.2_ENSMUSG00000102095.2	novel	1102	5	NA	NA	-20992	1546	intron_retention	FALSE	canonical	0	0	junction_8	2.18174242292714	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCAAATCGAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	150991265	151019642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_150991417_150992532_150992672_150993087_150993230_150994498_150994620_150995412_150995495_151003568_151003770_151008596_151008898_151009625_151010396_151011755_151017045_151017952_151018367_151018465
ES.1549.2	chr1	+	786	5	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGTAGTCCGAGCCAAG	NA	False	NA	NA	False	AATAAA	-22	NA	150991278	151003904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_150991384_150993087_150993230_150994498_150994620_150995412_150995495_151003568
ES.1549.3	chr1	+	2159	7	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.08166599946613	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGACATTTACAATCCCA	NA	False	NA	NA	False	ATTAAA	-25	NA	150991322	151010843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_150991417_150993087_150993230_150994498_150994620_150995412_150995495_151003568_151003770_151008596_151008898_151009625
ES.1549.4	chr1	+	2278	3	NNC	ENSMUSG00000102095.2	novel	1102	5	NA	NA	3421	1543	intron_retention	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGCTTCAAATCGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	151017205	151019639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151017365_151017421_151018367_151018465
ES.15490.1	chr17	-	179	1	Intergenic	novelGene_12919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTATTTTCTAAA	4491	False	NA	NA	False	NA	NA	NA	56977649	56977470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56977500_56977600
ES.15490.2	chr17	-	178	2	Antisense	novelGene_ENSMUSG00000002372.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATTATTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	56985884	56977471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_56977639_56985873
ES.15491.1	chr17	-	174	1	Intergenic	novelGene_12920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGAGCAAGCAGGGAC	9137	False	NA	NA	False	NA	NA	NA	56996322	56996148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_56996100_56996300
ES.15492.1	chr17	+	621	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	-65	-11	-65	7	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGGCTTGCTGCATG	NA	False	NA	29	True	AATAAA	-29	NA	57024701	57029148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ES.15492.10	chr17	+	4874	3	FSM	ENSMUSG00000002379.8	ENSMUST00000233233.2	918	3	16	-3972	16	3829	multi-exon	FALSE	canonical	3	2627	junction_1	33.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57024813	57032970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57024943_57028034_57028128_57028318
ES.15492.11	chr17	+	360	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233457.2	376	4	27	-11	16	5	multi-exon	FALSE	canonical	3	65	junction_1	1255.16807196841	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGCAGGCTTGCTGCA	NA	False	NA	27	True	AATAAA	-27	NA	57024813	57029146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57024838_57028076_57028128_57028318_57028442_57028984
ES.15492.12	chr17	+	3585	2	NIC	ENSMUSG00000002379.8	novel	545	4	NA	NA	212	0	intron_retention	FALSE	canonical	3	2760	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	184	False	NA	18	True	AATAAA	-18	NA	57025009	57029137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57028442_57028984
ES.15492.13	chr17	+	2781	3	ISM	ENSMUSG00000002379.8	ENSMUST00000233457.2	376	4	836	-2	825	0	3prime_fragment	FALSE	canonical	3	2694	junction_1	33	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	797	False	NA	18	True	AATAAA	-18	NA	57025622	57029137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57028128_57028318_57028442_57028984
ES.15492.2	chr17	+	508	4	NIC	ENSMUSG00000002379.8	novel	545	4	NA	NA	5	6	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	1249.98382211753	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCAGGCTTGCTGCAT	NA	False	NA	28	True	AATAAA	-28	NA	57024771	57029147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57024943_57028076_57028128_57028318_57028442_57028984
ES.15492.3	chr17	+	1270	2	ISM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	7	2	7	0	intron_retention	FALSE	canonical	3	2627	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAATGTCTTAAAGGCA	NA	False	NA	16	True	AATAAA	-16	NA	57024773	57029135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57024943_57028034
ES.15492.4	chr17	+	501	4	NNC	ENSMUSG00000002379.8	novel	545	4	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_2	1198.36249385012	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGGCTTGCTGCATG	NA	False	NA	29	True	AATAAA	-29	NA	57024774	57029148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57024943_57028034_57028128_57028365_57028442_57028984
ES.15492.5	chr17	+	414	3	NIC	ENSMUSG00000002379.8	novel	545	4	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	1296	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024774	57029137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57024943_57028034_57028128_57028984
ES.15492.6	chr17	+	1081	3	FSM	ENSMUSG00000002379.8	ENSMUST00000233233.2	918	3	-13	-150	-2	7	multi-exon	FALSE	canonical	3	2627	junction_1	33.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGGCTTGCTGCATG	NA	False	NA	29	True	AATAAA	-29	NA	57024784	57029148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57024943_57028034_57028128_57028318
ES.15492.7	chr17	+	4353	1	NIC	ENSMUSG00000002379.8	novel	493	4	NA	NA	0	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTAAAGGCAGGCT	NA	False	NA	20	True	AATAAA	-20	NA	57024786	57029139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57024800_57029100
ES.15492.8	chr17	+	5118	2	ISM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	13	-3864	-2	3864	intron_retention	FALSE	canonical	3	2627	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCTCAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57024795	57033005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57024943_57028034
ES.15492.9	chr17	+	472	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	19	2	4	2	multi-exon	FALSE	canonical	3	181	junction_2	1185.6477835625	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTAAAGGCAGGCT	NA	False	NA	20	True	AATAAA	-20	NA	57024801	57029139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ES.15493.1	chr17	-	1977	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	-7	-5	-2	5	multi-exon	FALSE	canonical	2	5	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTACCTTTTTTCCTGTT	6858	False	NA	-1	True	AATAAA	-21	NA	57024687	57020930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57022818_57024597
ES.15493.2	chr17	-	2101	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	123	2	123	-2	multi-exon	FALSE	canonical	3	64	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	7691	False	NA	-8	True	AATAAA	-14	NA	57023854	57020937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57022818_57023633
ES.15493.3	chr17	-	1980	1	NIC	ENSMUSG00000054723.7	novel	2226	2	NA	NA	1060	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	8628	False	NA	-8	True	AATAAA	-14	NA	57022917	57020937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57020900_57022900
ES.15493.4	chr17	-	2345	2	NNC	ENSMUSG00000054723.7	novel	2226	2	NA	NA	129	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	7697	False	NA	-8	True	AATAAA	-14	NA	57023848	57020937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57022818_57023383
ES.15493.5	chr17	-	2025	2	FSM	ENSMUSG00000054723.7	ENSMUST00000233400.2	345	2	3	-1683	3	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGGACTCTACCTTT	6526	False	NA	-10	True	AATAAA	-12	NA	57025019	57020939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57022818_57024872
ES.15494.1	chr17	+	173	1	Intergenic	novelGene_12921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTGGAT	NA	False	NA	NA	False	NA	NA	NA	57048795	57048968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57048800_57049000
ES.15495.1	chr17	-	188	1	Intergenic	novelGene_12922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGTAATAATGTA	NA	False	NA	NA	False	NA	NA	NA	57049496	57049308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57049300_57049500
ES.15496.1	chr17	-	1365	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	-49	-293	-49	293	multi-exon	FALSE	canonical	3	134	junction_2	5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTATTTGGCTGAT	NA	False	NA	NA	False	NA	NA	NA	57064579	57058031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57058831_57059308_57059491_57064195
ES.15496.2	chr17	-	1039	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	-15	-1	-15	1	multi-exon	FALSE	canonical	3	134	junction_2	5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGGTCGTTCATGCT	NA	False	NA	-2	True	CATAAA	-16	NA	57064545	57058323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57058831_57059308_57059491_57064195
ES.15496.3	chr17	-	1170	4	NNC	ENSMUSG00000039481.6	novel	1023	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.4157910944379	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTGGTCGTTCATGC	NA	False	NA	-3	True	CATAAA	-15	NA	57064555	57058324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57058831_57059308_57059491_57063165_57063288_57064195
ES.15497.1	chr17	+	2982	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-369	0	intron_retention	TRUE	canonical	1	3	junction_1	85.7472742501026	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	8854	False	NA	15	True	AATAAA	-16	NA	57071387	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071576_57071787_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.10	chr17	+	2306	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.3161232228726	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	9213	False	NA	11	True	NA	NA	NA	57071746	57077092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074930_57075028_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.12	chr17	+	2610	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-10	1	intron_retention	FALSE	canonical	3	256	junction_2	25.4283306569661	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9213	False	NA	13	True	NA	NA	NA	57071746	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.13	chr17	+	2494	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	220	junction_5	32.7336218588778	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9213	False	NA	15	True	AATAAA	-16	NA	57071746	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076663_57076735
ES.15497.14	chr17	+	3127	9	NIC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	-6	1	intron_retention	FALSE	canonical	3	256	junction_2	28.380230795397	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9217	False	NA	13	True	NA	NA	NA	57071750	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.15	chr17	+	2526	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	-30	253	-3	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9220	False	NA	15	True	AATAAA	-16	NA	57071753	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.16	chr17	+	3559	7	NIC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	256	junction_1	28.702013092387	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTTTTATTTTGTTG	9220	False	NA	13	True	AATAAA	-14	NA	57071753	57076838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.17	chr17	+	3923	6	NIC	ENSMUSG00000007603.10	novel	2184	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	256	junction_1	29.1986301048525	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	9221	False	NA	11	True	NA	NA	NA	57071754	57077092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074675_57074782_57074936_57075033_57075903_57076049_57076663_57076735
ES.15497.18	chr17	+	2279	11	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-2	2	intron_retention	FALSE	canonical	2	4	junction_1	89.257212593717	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTTGTTGGTTTT	9221	False	NA	18	True	AATAAA	-19	NA	57071754	57076843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071890_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.19	chr17	+	2145	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	82.9733474610304	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTTTATTTTGTTGG	9221	False	NA	14	True	AATAAA	-15	NA	57071754	57076839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074392_57074636_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.2	chr17	+	2665	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-41	0	intron_retention	FALSE	canonical	1	1	junction_2	86.3705260409767	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9182	False	NA	15	True	AATAAA	-16	NA	57071715	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072793_57073781_57074289_57074636_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.20	chr17	+	3325	9	NNC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_2	99.7671507812065	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTTCTTTTATTTTGT	9221	False	NA	11	True	AATAAA	-12	NA	57071754	57076836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072793_57073781_57074510_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.21	chr17	+	2238	12	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	1	-3	intron_retention	FALSE	canonical	3	222	junction_6	30.6103207356145	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTCTTTTATTTTGTT	9224	False	NA	12	True	AATAAA	-13	NA	57071757	57076837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.22	chr17	+	2341	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	1	-4	intron_retention	FALSE	canonical	3	256	junction_2	25.4283306569661	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTTCTTTTATTTTGT	9224	False	NA	11	True	AATAAA	-12	NA	57071757	57076836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.23	chr17	+	2008	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	81.9537047498295	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9227	False	NA	15	True	AATAAA	-16	NA	57071760	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071909_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.24	chr17	+	3822	15	Fusion	ENSMUSG00000007603.10_ENSMUSG00000090273.4	novel	2025	13	NA	NA	8	0	multi-exon	FALSE	canonical	0	0	junction_13	101.529527222179	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATGTGGACACGTGTC	9231	False	NA	NA	False	ATTAAA	-17	NA	57071764	57079134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735_57077452_57077535_57077602_57078026
ES.15497.25	chr17	+	2313	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	10	-3	intron_retention	FALSE	canonical	3	220	junction_6	32.4598213180541	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTCTTTTATTTTGTT	9233	False	NA	12	True	AATAAA	-13	NA	57071766	57076837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.26	chr17	+	2008	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	84.8925426739763	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9239	False	NA	15	True	AATAAA	-16	NA	57071772	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075472_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.27	chr17	+	1979	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	82.4575227347727	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTATTTTGTTGGTTT	9239	False	NA	17	True	AATAAA	-18	NA	57071772	57076842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071890_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.28	chr17	+	2909	10	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_1	26.4701089281224	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9244	False	NA	16	True	AATAAA	-17	NA	57071777	57076841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.29	chr17	+	2165	12	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	85.32756523205	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	9244	False	NA	11	True	NA	NA	NA	57071777	57077092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.3	chr17	+	2090	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-61	-4	-40	4	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTGTTGGTTTTTT	9183	False	NA	20	True	AATAAA	-21	NA	57071716	57076845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.31	chr17	+	2878	10	FSM	ENSMUSG00000007603.10	ENSMUST00000232684.2	2184	10	-946	252	4	0	multi-exon	FALSE	canonical	3	220	junction_5	34.159032570798	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9254	False	NA	15	True	AATAAA	-16	NA	57071787	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.32	chr17	+	1939	12	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	85.9951949455259	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTTTTATTTTGTTG	9261	False	NA	13	True	AATAAA	-14	NA	57071794	57076838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.33	chr17	+	2100	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	21	0	intron_retention	FALSE	non_canonical	0	0	junction_5	86.4862287800494	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9271	False	NA	15	True	AATAAA	-16	NA	57071804	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074930_57075028_57075151_57075347_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.35	chr17	+	3365	6	NIC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	40	-2	intron_retention	FALSE	canonical	3	256	junction_2	10.0279609093773	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCTGGCTCTCCTTG	9290	False	NA	9	True	NA	NA	NA	57071823	57077090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57071942_57072524_57072793_57073781_57074675_57074782_57074936_57075033_57076126_57076249
ES.15497.36	chr17	+	953	6	NNC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	52	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	122.031799134488	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9302	False	NA	13	True	NA	NA	NA	57071835	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072619_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.37	chr17	+	2168	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	57	0	intron_retention	FALSE	canonical	2	10	junction_3	83.722485303857	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9307	False	NA	15	True	AATAAA	-16	NA	57071840	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074392_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.38	chr17	+	2692	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	57	0	57	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9307	False	NA	12	True	NA	NA	NA	57071840	57077093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.39	chr17	+	1249	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.1736179667994	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9318	False	NA	15	True	AATAAA	-16	NA	57071851	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071946_57074218_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.4	chr17	+	2438	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	82.9733474610304	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9183	False	NA	13	True	NA	NA	NA	57071716	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074392_57074636_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.40	chr17	+	2780	8	ISM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	138	-1	138	1	intron_retention	FALSE	canonical	3	256	junction_2	18.9392153362018	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	9388	False	NA	13	True	NA	NA	NA	57071921	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249
ES.15497.41	chr17	+	2559	11	NNC	ENSMUSG00000007603.10	novel	2184	10	NA	NA	245	0	intron_retention	FALSE	canonical	0	0	junction_1	90.0713605981391	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	9495	False	NA	11	True	NA	NA	NA	57072028	57077092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072175_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.42	chr17	+	2206	11	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-451	0	intron_retention	FALSE	canonical	3	220	junction_5	32.4168166234749	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9749	False	NA	15	True	AATAAA	-16	NA	57072282	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.43	chr17	+	2094	11	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-209	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	88.9195703993221	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTCCTTGTGATT	9991	False	NA	14	True	NA	NA	NA	57072524	57077095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075472_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.44	chr17	+	2870	7	NIC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	256	junction_1	30.285676849333	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGCTCTCCTTGT	NA	False	NA	10	True	NA	NA	NA	57072734	57077091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074675_57074782_57074936_57075033_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.45	chr17	+	2117	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	32	0	intron_retention	FALSE	non_canonical	0	0	junction_1	130.272758992574	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	NA	False	NA	11	True	NA	NA	NA	57072765	57077092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072793_57073537_57073681_57073781_57074289_57074632_57074675_57074782_57074930_57075028_57075151_57075347_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.46	chr17	+	2037	8	NIC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	1502	1	intron_retention	FALSE	canonical	3	256	junction_1	26.8586625709852	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTCCTTGTGAT	NA	False	NA	13	True	NA	NA	NA	57074235	57077094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57074675_57074782_57074936_57075033_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.5	chr17	+	2340	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	-61	-254	-40	2	multi-exon	FALSE	canonical	3	220	junction_6	33.8230690505755	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTCCTTGTGATT	9183	False	NA	14	True	NA	NA	NA	57071716	57077095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.6	chr17	+	2665	12	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-40	0	intron_retention	FALSE	non_canonical	0	0	junction_4	111.446536861907	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9183	False	NA	15	True	AATAAA	-16	NA	57071716	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57072793_57073781_57074289_57074636_57074675_57074782_57074930_57075026_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.8	chr17	+	2072	13	NNC	ENSMUSG00000007603.10	novel	2025	13	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.3161232228726	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTATTTTGTTGGT	9197	False	NA	15	True	AATAAA	-16	NA	57071730	57076840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074930_57075026_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ES.15497.9	chr17	+	3222	8	NIC	ENSMUSG00000007603.10	novel	2749	10	NA	NA	-12	8	intron_retention	FALSE	canonical	3	256	junction_1	25.7007901093507	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTGGTTTTTTGAGA	9211	False	NA	24	True	AATAAA	-25	NA	57071744	57076849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076663_57076735
ES.15498.1	chr17	-	178	1	Intergenic	novelGene_12923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGAGGC	8197	False	NA	NA	False	NA	NA	NA	57073519	57073341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57073300_57073500
ES.15499.1	chr17	+	1867	1	Intergenic	novelGene_12924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	57097062	57098929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57097100_57098900
ES.155.1	chr1	+	176	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	17055999	17056175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_17056000_17056200
ES.1550.1	chr1	+	3365	3	Genic_Genomic	ENSMUSG00000114582.2	novel	945	1	NA	NA	-26901	731	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTAAGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	151052970	151081547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_151053021_151056679_151057736_151079288
ES.15500.1	chr17	+	562	1	Intergenic	novelGene_12926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTTCACAATGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	57142051	57142613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57142100_57142600
ES.15501.1	chr17	+	156	1	Intergenic	novelGene_12927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	57149041	57149197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57149000_57149200
ES.15502.1	chr17	+	313	1	Intergenic	novelGene_12929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAAAGACACGAG	NA	False	NA	NA	False	NA	NA	NA	57151363	57151676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57151400_57151700
ES.15502.2	chr17	+	177	1	Intergenic	novelGene_12928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAGAGCGAGCGAGCAG	NA	False	NA	NA	False	NA	NA	NA	57151363	57151540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57151400_57151500
ES.15503.1	chr17	+	174	1	Intergenic	novelGene_12930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	57172205	57172379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57172200_57172400
ES.15504.1	chr17	+	870	1	Antisense	novelGene_ENSMUSG00000024207.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCATAAAGGGTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	57180947	57181817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_57180900_57181800
ES.15505.1	chr17	+	2848	11	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1136	-1341	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.3884771378345	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57183638	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57183933_57184362_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57192083_57192224_57193440
ES.15505.10	chr17	+	2270	12	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1706	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.8679622641132	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTCGCACCCCGAGG	NA	False	NA	15	True	ATTAAA	-15	NA	57184208	57195903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193641_57195636
ES.15505.11	chr17	+	2646	11	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1706	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	19.0947636801297	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGCTCGCACCCCGAG	NA	False	NA	14	True	ATTAAA	-14	NA	57184208	57195902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57190498_57190625_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.12	chr17	+	3017	9	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1728	10	intron_retention	FALSE	canonical	3	36	junction_4	12.2754836971909	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGAGGTAATTTTGTCA	NA	False	NA	26	True	ATTAAA	-26	NA	57184230	57195914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.13	chr17	+	2212	12	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1729	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.0752363323373	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	17	True	ATTAAA	-17	NA	57184231	57195905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192140_57193440_57193688_57195636
ES.15505.14	chr17	+	1606	8	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1729	-3520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.1901960760082	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGACCTAAGTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	57184231	57192384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57190293_57190498_57190626_57190861_57191750_57191969_57192083
ES.15505.15	chr17	+	2667	10	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1747	-1341	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	18.3370366630011	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57184249	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57192083_57192224_57193440
ES.15505.16	chr17	+	1884	10	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1810	3522	1784	-3522	internal_fragment	FALSE	canonical	3	15	junction_6	11.0699236617306	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAGGACCTAAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	57184286	57192382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083
ES.15505.17	chr17	+	3369	9	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1926	-1	intron_retention	FALSE	canonical	3	15	junction_4	16.583123951777	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTCGCACCCCGAGG	NA	False	NA	15	True	ATTAAA	-15	NA	57184428	57195903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189987_57190315_57190498_57190626_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.18	chr17	+	3385	9	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1942	-5	intron_retention	FALSE	canonical	3	34	junction_4	13.0234164104508	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGATGGCTCGCACCCC	NA	False	NA	11	True	ATTAAA	-11	NA	57184444	57195899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57190498_57190626_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.19	chr17	+	2821	8	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1948	-1368	intron_retention	FALSE	canonical	3	8	junction_6	20.3359538848849	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184450	57194536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189987_57190315_57190498_57190626_57190861_57192083_57192224_57193440
ES.15505.2	chr17	+	2892	8	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1626	1	intron_retention	FALSE	canonical	3	8	junction_5	19.074504834828	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	17	True	ATTAAA	-17	NA	57184128	57195905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57190498_57190626_57190861_57192083_57192224_57193440_57193688_57195636
ES.15505.20	chr17	+	1777	9	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	6815	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8418475610008	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGATGGCTCGCACCC	NA	False	NA	10	True	ATTAAA	-10	NA	57189317	57195898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57189455_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.21	chr17	+	1435	7	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	7275	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.0030191255167	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTCGCACCCCGAGG	NA	False	NA	15	True	ATTAAA	-15	NA	57189777	57195903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57189987_57190293_57190498_57190626_57190861_57191750_57191969_57192083_57192140_57193440_57193688_57195636
ES.15505.22	chr17	+	1519	7	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	7275	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.6838170411321	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTCGCACCCCGAGG	NA	False	NA	15	True	ATTAAA	-15	NA	57189777	57195903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57189987_57190293_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.23	chr17	+	2980	4	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	7620	-1341	intron_retention	FALSE	canonical	3	36	junction_1	15.9234278833282	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57190122	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57190498_57190626_57191969_57192083_57192224_57193440
ES.15505.24	chr17	+	783	1	Genic_Genomic	ENSMUSG00000024209.10	novel	NA	NA	NA	NA	12620	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	17	True	ATTAAA	-17	NA	57195122	57195905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_57195100_57195900
ES.15505.3	chr17	+	3002	11	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1656	1341	1630	-1341	internal_fragment	FALSE	canonical	3	15	junction_6	15.5244967712322	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57184132	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440
ES.15505.4	chr17	+	3084	10	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1637	-1341	intron_retention	FALSE	canonical	3	15	junction_5	15.4064280315509	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57184139	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440
ES.15505.5	chr17	+	3404	9	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1646	-1341	intron_retention	FALSE	canonical	3	34	junction_4	12.6928867874885	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAGGAGTGATGCACA	NA	False	NA	NA	False	NA	NA	NA	57184148	57194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440
ES.15505.6	chr17	+	3429	7	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1683	-1368	intron_retention	FALSE	non_canonical	0	0	junction_4	25.0027776234739	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184185	57194536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57190498_57190612_57190861_57192083_57192224_57193440
ES.15505.7	chr17	+	2813	9	NNC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1685	-1368	intron_retention	FALSE	canonical	1	2	junction_5	21.2628637535023	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184187	57194536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189987_57190293_57190498_57190626_57190861_57192083_57192224_57193440
ES.15505.8	chr17	+	2327	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1724	-1	1698	1	3prime_fragment	FALSE	canonical	3	15	junction_6	15.5260378474249	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTCGCACCCCGAGGTA	NA	False	NA	17	True	ATTAAA	-17	NA	57184200	57195905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
ES.15505.9	chr17	+	3106	8	NIC	ENSMUSG00000024209.10	novel	2677	14	NA	NA	1699	-1368	intron_retention	FALSE	canonical	3	8	junction_6	18.372561618026	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57184201	57194536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57190498_57190626_57190861_57192083_57192224_57193440
ES.15506.1	chr17	+	2869	1	Antisense	novelGene_ENSMUSG00000024212.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACCATTTCCATTCAG	NA	False	NA	NA	False	NA	NA	NA	57208872	57211741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_57208900_57211700
ES.15507.1	chr17	+	4144	1	Intergenic	novelGene_12931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCACAATGGTACAAGC	NA	False	NA	NA	False	AAAAAG	-7	NA	57215869	57220013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57215900_57220000
ES.15508.1	chr17	-	4562	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-77	-1135	-72	1132	multi-exon	TRUE	canonical	3	81	junction_12	62.8192882463543	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTCACAGGTAAACATT	NA	False	NA	NA	False	NA	NA	NA	57138085	57081764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.10	chr17	-	3387	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.7060640314599	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138053	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091657_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.11	chr17	-	2822	10	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-3028	-1	intron_retention	FALSE	canonical	3	246	junction_9	16.9901932498329	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57093732	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608
ES.15508.12	chr17	-	3356	17	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	90.313321795569	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138078	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094787_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.13	chr17	-	3598	19	Fusion	ENSMUSG00000024207.9_ENSMUSG00000024206.16	novel	3350	18	NA	NA	-15299	-1	multi-exon	FALSE	canonical	0	0	junction_16	101.195081127713	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57153312	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57150260_57150378_57152403_57152514_57153092
ES.15508.14	chr17	-	3369	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-104	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_16	78.7249960304858	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138117	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.15	chr17	-	3218	16	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-73	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	99.9011511445188	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138086	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.16	chr17	-	3487	13	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-5787	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	77.8436823954834	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	9441	False	NA	-2	True	NA	NA	NA	57096491	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094846_57095725
ES.15508.17	chr17	-	3366	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-81	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	87.1996407317714	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138094	57082898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57112357_57112448_57115233_57115326_57137882
ES.15508.18	chr17	-	3407	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-66	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	68.1110077373694	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138079	57082898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094821_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.2	chr17	-	3522	19	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.5398333945826	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCGTGTTTGTTCA	NA	False	NA	0	True	NA	NA	NA	57138054	57082895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089054_57089177_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.20	chr17	-	3605	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-89	1	intron_retention	FALSE	canonical	3	178	junction_11	30.2378717652035	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138102	57082898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.23	chr17	-	3211	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	68.7226007056694	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTGTCCGTGTTTGT	NA	False	NA	-3	True	NA	NA	NA	57138040	57082898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110555_57110651_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.25	chr17	-	3444	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	89.4847225560557	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGTGTCCGTGTTTG	NA	False	NA	-4	True	NA	NA	NA	57138096	57082899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57132622_57132704_57137882
ES.15508.26	chr17	-	3289	16	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.4684079389861	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGTGTCCGTGTTTG	NA	False	NA	-4	True	NA	NA	NA	57138037	57082899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084103_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.28	chr17	-	3400	3	ISM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	50987	1	3683	-1	intron_retention	FALSE	canonical	3	283	junction_1	7	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTGGTGTCCGTGTTT	710	False	NA	-5	True	NA	NA	NA	57087021	57082900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57084075_57084431_57084475_57084838
ES.15508.29	chr17	-	3410	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-138	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.7733784254362	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTGGTGTCCGTGTTT	NA	False	NA	-5	True	NA	NA	NA	57138151	57082900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086886_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.3	chr17	-	3507	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-154	-3	-149	0	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138162	57082896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.31	chr17	-	3303	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	70.8021009575281	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTGGTGTCCGTGTTT	NA	False	NA	-5	True	NA	NA	NA	57138054	57082900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090745_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.32	chr17	-	4676	13	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-50	-1	intron_retention	FALSE	canonical	3	62	junction_12	65.8121801458936	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTGGTGTCCGTGTTT	NA	False	NA	-5	True	NA	NA	NA	57138063	57082900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087905_57089250_57089349_57090606_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.33	chr17	-	4540	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-66	-2	intron_retention	FALSE	canonical	3	178	junction_11	29.7779933657204	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACCTGGTGTCCGTGTT	NA	False	NA	-6	True	NA	NA	NA	57138079	57082901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.35	chr17	-	3530	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-177	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.9304273837046	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACCTGGTGTCCGTGTT	NA	False	NA	-6	True	NA	NA	NA	57138190	57082901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094755_57106243_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.37	chr17	-	3539	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.2707931860741	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57138079	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089054_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.38	chr17	-	3361	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-90	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	69.5736738554893	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57138103	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087083_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.39	chr17	-	3417	19	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	99.3853331455122	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57137973	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57092867_57092973_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.4	chr17	-	3365	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	86.3707261967271	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138063	57082896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.40	chr17	-	3410	17	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-90	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	90.313321795569	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57138103	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094821_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.41	chr17	-	2950	15	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-17	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	72.8039021156511	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57137988	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.42	chr17	-	3680	3	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	1878	-3	intron_retention	FALSE	canonical	3	262	junction_2	10.5	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57088826	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084993_57086879
ES.15508.43	chr17	-	3502	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-90	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.9304273837046	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57138103	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094821_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.45	chr17	-	3306	17	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	96.6680652736466	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57138069	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091657_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.46	chr17	-	3365	18	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	84.9766505686622	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	False	NA	-7	True	NA	NA	NA	57137979	57082902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084384_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.47	chr17	-	4841	14	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	4	-4	intron_retention	FALSE	canonical	3	62	junction_13	62.2735899077611	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATACCTGGTGTCCGTG	NA	False	NA	-8	True	NA	NA	NA	57137967	57082903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084475_57084838_57084993_57086879_57087089_57087754_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.48	chr17	-	3392	19	NNC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	98.4818871608654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATACCTGGTGTCCGTG	NA	False	NA	-8	True	NA	NA	NA	57137973	57082903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57132622_57132704_57137882
ES.15508.5	chr17	-	3524	16	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	115.979883313156	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138070	57082896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089054_57089349_57090606_57090762_57091299_57091413_57091652_57091767_57092296_57092413_57093608_57093729_57094578_57094846_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.50	chr17	-	3597	14	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-67	-2341	combination_of_known_junctions	FALSE	canonical	3	62	junction_13	83.8215913210769	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGCTAA	NA	False	NA	NA	False	NA	NA	NA	57138080	57085240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.51	chr17	-	1833	12	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-70	1268	combination_of_known_junctions	FALSE	canonical	3	62	junction_11	66.4312233668516	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACCTCCTACCGTGTC	NA	False	NA	NA	False	NA	NA	NA	57138083	57087598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.52	chr17	-	7936	5	FSM	ENSMUSG00000024206.16	ENSMUST00000233643.2	4141	5	-157	-3638	-83	3638	multi-exon	FALSE	canonical	3	258	junction_3	14.3940091704848	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTTAGTAATCCAT	NA	False	NA	NA	False	NA	NA	NA	57138096	57103270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.53	chr17	-	3733	6	ISM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	-69	20402	-64	3607	5prime_fragment	FALSE	canonical	3	89	junction_1	73.4373202125459	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57138077	57103301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.54	chr17	-	1401	5	NNC	ENSMUSG00000024206.16	novel	4141	5	NA	NA	-93	-2290	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	123.990675052602	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTGTCAGTGTACAGAAT	NA	False	NA	NA	False	TTTAAA	-18	NA	57138106	57109198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57109953_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.55	chr17	-	1470	6	NNC	ENSMUSG00000024206.16	novel	4141	5	NA	NA	-72	-2292	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	106.679707536157	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCTGTCAGTGTACAGA	NA	False	NA	NA	False	TTTAAA	-16	NA	57138085	57109200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57109953_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.56	chr17	-	1139	5	FSM	ENSMUSG00000024206.16	ENSMUST00000233643.2	4141	5	-34	3036	-2	-3036	multi-exon	FALSE	canonical	3	258	junction_3	14.3940091704848	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTGTGTGTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	57137973	57109944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.57	chr17	-	551	3	ISM	ENSMUSG00000024206.16	ENSMUST00000233000.2	812	6	-132	17546	-90	-4248	5prime_fragment	FALSE	canonical	3	62	junction_2	116	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATCAAACTAAG	NA	False	NA	-20	True	NA	NA	NA	57138103	57111156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57111397_57112357_57112448_57137882
ES.15508.58	chr17	-	4937	1	Intergenic	novelGene_12925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGCTGTGGCCTC	NA	False	NA	NA	False	NA	NA	NA	57132267	57127330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57127300_57132300
ES.15508.59	chr17	-	654	2	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	7	-29751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAAGTGTGGCCTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	57137964	57136659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57137232_57137882
ES.15508.6	chr17	-	3318	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_15	59.2522292126353	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138140	57082896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
ES.15508.60	chr17	-	3651	14	ISM	ENSMUSG00000024207.9	ENSMUST00000043062.5	2609	15	1460	-1203	1460	1203	3prime_fragment	TRUE	canonical	1	2	junction_3	2.01767339209292	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTAGGACTTGGTCATC	NA	False	NA	NA	False	ATTAAA	-19	NA	57179987	57148899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57150378_57152403_57152514_57153092_57153340_57153521_57153662_57154610_57154829_57156714_57156949_57157034_57157217_57160736_57160914_57163878_57164029_57168538_57168623_57169870_57169992_57171459_57171549_57175225_57175456_57179796
ES.15508.61	chr17	-	2638	16	NNC	ENSMUSG00000024207.9	novel	2609	15	NA	NA	-3225	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.90438091427809	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGAGTCTTCATTC	9508	False	NA	NA	False	NA	NA	NA	57184672	57150103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57150378_57152403_57152514_57153092_57153340_57153521_57153662_57154610_57154829_57156714_57156949_57157034_57157217_57160736_57160914_57163878_57164029_57168538_57168623_57169870_57169992_57171459_57171549_57175225_57175456_57179796_57179898_57183391_57183538_57184537
ES.15508.63	chr17	-	2365	11	NIC	ENSMUSG00000024207.9	novel	2609	15	NA	NA	1314	-1	intron_retention	FALSE	canonical	0	0	junction_8	2.7	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGAGTCTTCATTC	NA	False	NA	NA	False	NA	NA	NA	57180133	57150103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57150378_57152403_57152514_57153092_57153340_57153521_57153662_57154610_57154829_57156714_57157217_57160736_57160914_57163878_57164029_57169870_57169992_57171459_57171549_57179796
ES.15508.64	chr17	-	650	3	NNC	ENSMUSG00000024207.9	novel	2609	15	NA	NA	11715	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGAGTCTTCATTC	2727	False	NA	NA	False	NA	NA	NA	57169732	57150103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57150378_57160736_57160914_57169533
ES.15508.65	chr17	-	2283	14	NNC	ENSMUSG00000024207.9	novel	2609	15	NA	NA	-2100	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2.17843111669328	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGAGTCTTCATTC	NA	False	NA	NA	False	NA	NA	NA	57183547	57150103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57150378_57152403_57152514_57153092_57153340_57153521_57153662_57154610_57154829_57156714_57156949_57157034_57157217_57160736_57160914_57163878_57164029_57168538_57168623_57169870_57169992_57171459_57171549_57179796_57179898_57183391
ES.15508.66	chr17	-	1789	2	ISM	ENSMUSG00000024207.9	ENSMUST00000043062.5	2609	15	17476	9115	17476	-9115	internal_fragment	FALSE	canonical	3	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAGGTGCTACAGTGT	8488	False	NA	NA	False	NA	NA	NA	57163971	57159217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57160914_57163878
ES.15508.67	chr17	-	2000	2	NIC	ENSMUSG00000024207.9	novel	2609	15	NA	NA	1344	-9118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCACAGGTGCTACAG	NA	False	NA	NA	False	NA	NA	NA	57180103	57159220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57160914_57179796
ES.15508.7	chr17	-	3450	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	-167	0	-167	0	multi-exon	FALSE	canonical	3	178	junction_12	29.2883695986991	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138180	57082896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.8	chr17	-	3253	16	NIC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-91	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	72.3456517928571	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138104	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15508.9	chr17	-	3232	17	NNC	ENSMUSG00000024206.16	novel	3283	17	NA	NA	-94	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	68.3440000566985	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCCGTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	57138107	57082897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094684_57110544_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ES.15509.1	chr17	-	818	2	Antisense	novelGene_ENSMUSG00000024209.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	6114	False	NA	NA	False	NA	NA	NA	57192192	57191259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_57191967_57192081
ES.1551.1	chr1	+	1321	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTTTGTGCTC	824	False	NA	NA	False	NA	NA	NA	151133829	151135150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151133800_151135200
ES.15510.1	chr17	-	3786	13	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-9	5547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5080313513742	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGTATGCCTCTAGT	6025	False	NA	NA	False	TTTAAA	-5	NA	57242424	57194063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57196031_57201436_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.10	chr17	-	5951	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-50	-1	intron_retention	FALSE	canonical	3	105	junction_8	17.0296799735051	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCCTGCCTTCAA	5984	False	NA	-4	True	AATAAA	-14	NA	57242465	57199611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.11	chr17	-	3691	12	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.3465756413896	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCCTGCCTTCAA	5960	False	NA	-4	True	AATAAA	-14	NA	57242489	57199611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57201591_57201666_57201739_57201830_57201876_57201989_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.12	chr17	-	3689	12	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6616517369595	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCCTGCCTTCAA	5959	False	NA	-4	True	AATAAA	-14	NA	57242490	57199611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57201570_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.16	chr17	-	2452	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-74	-1132	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATGGTGTGTGTGAGG	5960	False	NA	NA	False	AAAACA	-20	NA	57242489	57200742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.17	chr17	-	2652	12	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-14	-1136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.1447687950714	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGGATGGTGTGTGT	6020	False	NA	NA	False	AAAACA	-16	NA	57242429	57200746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204606_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.18	chr17	-	2574	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-74	1136	-74	-1136	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGGATGGTGTGTGT	5960	False	NA	NA	False	AAAACA	-16	NA	57242489	57200746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.2	chr17	-	3884	1	Antisense	novelGene_ENSMUSG00000024209.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGCCACCTGTATGC	9637	False	NA	NA	False	NA	NA	NA	57197954	57194070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_57194100_57198000
ES.15510.3	chr17	-	3719	12	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-75	5540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.7204271904148	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGCCACCTGTATGC	5959	False	NA	NA	False	NA	NA	NA	57242490	57194070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57196031_57201436_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.4	chr17	-	6440	1	Genic_Genomic	ENSMUSG00000024212.10	novel	NA	NA	NA	NA	2937	5313	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9550	False	NA	NA	False	NA	NA	NA	57200737	57194297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_57194300_57200700
ES.15510.5	chr17	-	4837	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	25	-1226	25	1226	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTCCCTAAATTTG	6059	False	NA	NA	False	ATTAAA	-19	NA	57242390	57198384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.6	chr17	-	3756	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	-117	-3	-117	3	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCCTGCCTTCAATTCA	5917	False	NA	0	True	AATAAA	-18	NA	57242532	57199607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.7	chr17	-	3592	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-81	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGCCTGCCTTCAATT	5953	False	NA	-2	True	AATAAA	-16	NA	57242496	57199609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15510.8	chr17	-	3788	13	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	54.4408445521885	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	6013	False	NA	-3	True	AATAAA	-15	NA	57242436	57199610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57232317_57232449_57233991_57234173_57242262
ES.15510.9	chr17	-	4332	12	NNC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	-74	0	intron_retention	FALSE	canonical	3	11	junction_1	40.4047701954293	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	5960	False	NA	-3	True	AATAAA	-15	NA	57242489	57199610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57199793_57201436_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ES.15511.1	chr17	-	1682	6	NNC	ENSMUSG00000045019.5	novel	2429	6	NA	NA	7658	-878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACTTCTGTTGATTAA	9436	False	NA	NA	False	AATAAA	-14	NA	57281468	57261367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57262248_57262495_57262634_57265312_57265451_57265896_57266039_57266124_57266240_57281199
ES.15512.1	chr17	+	158	1	Intergenic	novelGene_12932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	4552	False	NA	NA	False	NA	NA	NA	57289915	57290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57289900_57290100
ES.15513.1	chr17	+	177	1	Intergenic	novelGene_12933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTACT	8414	False	NA	NA	False	NA	NA	NA	57293777	57293954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57293800_57294000
ES.15514.1	chr17	+	1279	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	-291	-5	-291	5	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCTTCCATTACTTC	NA	False	NA	38	True	ATTAAA	-26	NA	57297013	57303193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
ES.15514.11	chr17	+	1702	1	FSM	ENSMUSG00000002660.9	ENSMUST00000233845.2	434	1	140	-1408	140	1408	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAAGACTGGTTA	NA	False	NA	NA	False	NA	NA	NA	57297531	57299233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57297500_57299200
ES.15514.12	chr17	+	1444	2	NIC	ENSMUSG00000002660.9	novel	983	6	NA	NA	2023	-6	intron_retention	FALSE	canonical	3	1322	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATGTCTGAAGCACCT	NA	False	NA	27	True	ATTAAA	-15	NA	57299414	57303182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57300554_57302877
ES.15514.2	chr17	+	2421	5	NIC	ENSMUSG00000002660.9	novel	983	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1307	junction_3	101.465511381947	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGAAGCACCTTCCAT	NA	False	NA	32	True	ATTAAA	-20	NA	57297300	57303187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57297514_57297605_57297678_57298293_57300014_57300447_57300554_57302877
ES.15514.7	chr17	+	2012	4	NNC	ENSMUSG00000002660.9	novel	983	6	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	705.790809423491	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297313	57303188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57297514_57297605_57297678_57298293_57298569_57301723
ES.15514.8	chr17	+	3019	4	NIC	ENSMUSG00000002660.9	novel	983	6	NA	NA	10	-5	intron_retention	FALSE	canonical	3	1307	junction_2	116.362460536989	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGTCTGAAGCACCTT	NA	False	NA	28	True	ATTAAA	-16	NA	57297314	57303183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57297514_57297605_57300014_57300447_57300554_57302877
ES.15514.9	chr17	+	3707	4	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	34	0	34	0	intron_retention	FALSE	canonical	3	1424	junction_2	74.2203925256844	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297338	57303188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825
ES.15515.1	chr17	+	577	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	-14	173	-14	1	multi-exon	FALSE	canonical	3	32	junction_1	221	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGGATCTTCAAATGA	353	False	NA	5	True	AATAAA	-15	NA	57304324	57306138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57304568_57305670_57305796_57305929
ES.15515.2	chr17	+	752	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-16	181	-12	4	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGATCTTCAAATGACCG	355	False	NA	8	True	AATAAA	-18	NA	57304326	57306141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ES.15515.3	chr17	+	5007	1	Genic_Genomic	ENSMUSG00000002661.15	novel	NA	NA	NA	NA	2	3025	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	369	False	NA	NA	False	NA	NA	NA	57304340	57309347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_57304300_57309300
ES.15515.4	chr17	+	883	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	6	28	6	-17	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAAC	377	False	NA	NA	False	NA	NA	NA	57304348	57306294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ES.15515.5	chr17	+	746	4	NNC	ENSMUSG00000002661.15	novel	917	4	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.289872955204	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTCATGGGATCTTCA	378	False	NA	0	True	AATAAA	-10	NA	57304349	57306133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57304568_57305388_57305563_57305670_57305821_57305929
ES.15515.6	chr17	+	742	4	NNC	ENSMUSG00000002661.15	novel	917	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	215.097393961175	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	381	False	NA	4	True	AATAAA	-14	NA	57304352	57306137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57304568_57305388_57305563_57305650_57305796_57305929
ES.15515.7	chr17	+	1945	2	ISM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	118	-904	118	904	intron_retention	FALSE	canonical	3	443	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGATGCCCCTGATTTA	489	False	NA	NA	False	CATAAA	-13	NA	57304460	57307226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57304568_57305388
ES.15516.1	chr17	+	2205	1	Antisense	novelGene_ENSMUSG00000002658.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCGTCTATATGTATCG	2206	False	NA	NA	False	NA	NA	NA	57314069	57316274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_57314100_57316300
ES.15517.1	chr17	-	1872	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	-149	-6	-149	6	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCGAGTCATCACTGCCA	NA	False	NA	0	True	AATAAA	-19	NA	57318437	57310398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ES.15517.13	chr17	-	3601	12	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-109	2	intron_retention	FALSE	canonical	3	23	junction_11	177.779276279268	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGCGAGTCATCACT	NA	False	NA	-4	True	AATAAA	-15	NA	57318397	57310402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57316761_57317975_57318015_57318108
ES.15517.15	chr17	-	1857	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-120	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	175.382835217386	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGCGAGTCATCACT	NA	False	NA	-4	True	AATAAA	-15	NA	57318408	57310402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318041_57318108
ES.15517.17	chr17	-	2235	12	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_10	183.483374615605	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318258	57310404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314907_57316687_57316761_57317983_57318023_57318108
ES.15517.18	chr17	-	1718	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	169.544405851551	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318301	57310404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311184_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ES.15517.19	chr17	-	1858	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	170.711419913516	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318437	57310404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318015_57318108
ES.15517.2	chr17	-	1891	12	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-110	4	intron_retention	TRUE	canonical	3	23	junction_11	178.029016113982	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCGAGTCATCACTGC	NA	False	NA	-2	True	AATAAA	-17	NA	57318398	57310400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318015_57318108
ES.15517.21	chr17	-	1752	14	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	167.868256318132	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318397	57310404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108_57318269_57318342
ES.15517.23	chr17	-	1716	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	233.276823514229	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTGTGTGCGAGTCA	NA	False	NA	-9	True	AATAAA	-10	NA	57318301	57310407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311423_57311510_57311573_57311665_57311820_57312359_57312545_57313990_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ES.15517.3	chr17	-	2441	10	NIC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	28	4	intron_retention	FALSE	canonical	3	510	junction_5	60.0703291521234	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCGAGTCATCACTGC	NA	False	NA	-2	True	AATAAA	-17	NA	57318260	57310400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314907_57316687_57316761_57317975_57318023_57318108
ES.15517.4	chr17	-	1519	11	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-16	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	235.26971755838	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCGAGTCATCACTGC	NA	False	NA	-2	True	AATAAA	-17	NA	57318304	57310400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57310632_57310720_57310812_57310914_57311033_57311510_57311570_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ES.15517.5	chr17	-	4233	10	NIC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-109	2	intron_retention	FALSE	canonical	3	510	junction_6	68.3435403397632	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGCGAGTCATCACT	NA	False	NA	-4	True	AATAAA	-15	NA	57318397	57310402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57310632_57310720_57310812_57310914_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57316761_57317975_57318023_57318108
ES.15517.9	chr17	-	1801	12	NIC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-14	2	intron_retention	FALSE	canonical	3	510	junction_6	61.9898685403743	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGCGAGTCATCACT	NA	False	NA	-4	True	AATAAA	-15	NA	57318302	57310402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57310632_57310720_57310812_57310914_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ES.15518.1	chr17	-	2448	1	Antisense	novelGene_ENSMUSG00000109739.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAACTTTCTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	57327337	57324889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_57324900_57327300
ES.15519.1	chr17	+	125	1	Antisense	novelGene_ENSMUSG00000007670.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57328231	57328356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_57328200_57328400
ES.1552.1	chr1	+	175	1	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGACTGAGCAAGTGGG	NA	False	NA	NA	False	NA	NA	NA	151167582	151167757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151167600_151167800
ES.15520.1	chr17	-	4268	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-282	-8	-248	8	multi-exon	TRUE	canonical	3	570	junction_17	70.4455420481926	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTGGCTGTGATCTGT	NA	False	NA	-1	True	AATAAA	-23	NA	57338770	57328042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.11	chr17	-	2951	3	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	724	junction_1	30.5	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57331180	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330414_57330504
ES.15520.12	chr17	-	3982	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_3	165.68557373097	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338486	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330498_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.13	chr17	-	3879	19	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_18	165.934577320754	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338477	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147_57338229_57338316
ES.15520.14	chr17	-	4042	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_14	170.61444017794	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338494	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334157_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.16	chr17	-	3823	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	33	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	219.123055598469	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTCCTGCTGGCT	NA	False	NA	-10	True	AATAAA	-14	NA	57338455	57328051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330312_57330519_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334052_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.17	chr17	-	4076	17	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	9	-2	intron_retention	FALSE	canonical	3	570	junction_16	72.5977788916438	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTGTGTCCTGCTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	57338513	57328052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.18	chr17	-	3123	19	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	-74	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.934577320754	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTGTGTCCTGCTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	57338596	57328052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57328845_57329805_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.20	chr17	-	3912	17	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_12	175.627757985462	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTGTGTCCTGCTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	57338496	57328052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.23	chr17	-	4295	16	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-16	-7	intron_retention	FALSE	canonical	3	570	junction_15	64.5966631405128	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338504	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330937_57331010_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.24	chr17	-	3471	19	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-78	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	165.100380988262	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338600	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57328278_57328889_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.25	chr17	-	4518	14	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	44	-7	intron_retention	FALSE	canonical	3	570	junction_13	64.1174956968679	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338444	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.26	chr17	-	4111	16	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	9	-7	intron_retention	FALSE	canonical	3	570	junction_15	74.1069497415728	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338479	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.27	chr17	-	4067	17	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-8	-7	intron_retention	FALSE	canonical	3	570	junction_16	70.708799841321	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338496	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.28	chr17	-	3911	19	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	-5	-7	intron_retention	FALSE	canonical	0	0	junction_18	165.934577320754	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338493	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147_57338333_57338397
ES.15520.29	chr17	-	3965	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	170.24714378044	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338489	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332886_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.3	chr17	-	4109	17	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-22	1	intron_retention	FALSE	canonical	3	570	junction_16	71.7584653107213	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTCCTGCTGGCTGT	NA	False	NA	-8	True	AATAAA	-16	NA	57338544	57328049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.30	chr17	-	2190	5	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-680	-7	intron_retention	FALSE	canonical	0	0	junction_2	298.02799784584	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57332542	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330087_57331975_57332079_57332307_57332407_57332495
ES.15520.32	chr17	-	3373	19	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-15	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.934577320754	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338503	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57328266_57328878_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.34	chr17	-	4386	16	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-219	-7	intron_retention	FALSE	canonical	3	570	junction_15	71.9383686838177	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338741	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57330137_57330212_57330414_57330504_57330594_57330826_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.36	chr17	-	4520	14	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-16	-7	intron_retention	FALSE	canonical	3	570	junction_13	79.4010865440688	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338504	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.37	chr17	-	4202	15	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	7	-7	intron_retention	FALSE	canonical	3	570	junction_14	74.7275664241347	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338481	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57331493_57331788_57331892_57331979_57332079_57332307_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.39	chr17	-	4355	15	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	570	junction_14	65.2818066976879	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338490	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.4	chr17	-	6013	17	ISM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-26	0	8	0	intron_retention	FALSE	canonical	3	571	junction_11	68.8204184817268	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338514	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041
ES.15520.40	chr17	-	3809	19	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	15	-7	intron_retention	FALSE	non_canonical	0	0	junction_12	219.02086404927	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338507	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333847_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147_57338222_57338397
ES.15520.41	chr17	-	3953	17	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	13	-7	intron_retention	FALSE	canonical	0	0	junction_15	175.452974023668	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57338509	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57336041_57336139_57338147
ES.15520.43	chr17	-	2223	3	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-2046	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	300.5	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57333908	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329088_57331810_57332938_57333842
ES.15520.44	chr17	-	2169	8	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-162	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.448866418249	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTCCCTGTGTCCTG	NA	False	NA	-16	True	AATAAA	-8	NA	57331333	57328057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329336_57329805_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246
ES.15520.47	chr17	-	3767	19	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	8	-65	intron_retention	FALSE	canonical	0	0	junction_18	165.934577320754	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGCAGTTTTTACTT	NA	False	NA	-74	True	GATAAA	-32	NA	57338480	57328115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147_57338240_57338377
ES.15520.49	chr17	-	3754	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	-119	343	-85	10	multi-exon	FALSE	canonical	3	570	junction_17	70.4455420481926	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTATTGCTATCTCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	57338607	57328393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.5	chr17	-	3865	19	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.934577320754	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338520	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57328880_57329024_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.50	chr17	-	2693	19	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	12	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	165.934577320754	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACTATTGCTATCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	57338510	57328396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57328845_57329805_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.52	chr17	-	2917	2	NNC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	-8	-5023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57338496	57335527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57336259_57336310
ES.15520.53	chr17	-	2983	1	NIC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	8	-5027	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	830	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	57338514	57335531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57335500_57338500
ES.15520.54	chr17	-	951	2	ISM	ENSMUSG00000007670.11	ENSMUST00000233480.2	2698	19	27	7132	-7	-5031	5prime_fragment	FALSE	canonical	3	570	junction_1	0	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57338495	57335535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57336139_57338147
ES.15520.6	chr17	-	3688	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	443	0	intron_retention	FALSE	canonical	2	9	junction_17	168.281935122524	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338045	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57337994
ES.15520.7	chr17	-	4293	16	NIC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	570	junction_15	63.0923837629305	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338496	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.8	chr17	-	3936	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_10	169.028406121943	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338479	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332374_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15520.9	chr17	-	3962	18	NNC	ENSMUSG00000007670.11	novel	3978	18	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_3	165.903148467051	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338483	57328050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57329971_57330058_57330137_57330212_57330414_57330515_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ES.15521.1	chr17	-	160	1	Intergenic	novelGene_12934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	57349468	57349308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57349300_57349500
ES.15522.1	chr17	-	3376	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	-8	-6	-8	6	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAATTGTTTAAATTA	NA	False	NA	-1	True	AATAAA	-22	NA	57366871	57350704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.10	chr17	-	990	1	NIC	ENSMUSG00000046329.15	novel	3362	10	NA	NA	-1817	23	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCCAAAAGCCAGGCAAGT	NA	False	NA	NA	False	NA	NA	NA	57364202	57363212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57363200_57364200
ES.15522.11	chr17	-	230	1	ISM	ENSMUSG00000046329.15	ENSMUST00000165187.2	2298	2	2512	842	-1922	-842	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTGGGGAGG	NA	False	NA	NA	False	AATAAA	-32	NA	57364307	57364077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57364100_57364300
ES.15522.2	chr17	-	3389	10	NNC	ENSMUSG00000046329.15	novel	3362	10	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	14.0931644406293	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGATTTTTAATTGTT	NA	False	NA	-8	True	AATAAA	-15	NA	57366852	57350711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57352664_57354185_57354337_57359681_57359850_57360201_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.3	chr17	-	4863	9	NNC	ENSMUSG00000046329.15	novel	3362	10	NA	NA	10	-3	intron_retention	TRUE	canonical	0	0	junction_6	16.0112265301569	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTGATTTTTAATTG	NA	False	NA	-10	True	AATAAA	-13	NA	57366809	57350713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362422_57363581_57363670_57365107_57365235_57366520
ES.15522.4	chr17	-	3334	10	NNC	ENSMUSG00000046329.15	novel	3362	10	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	14.428195989318	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGTTGATTTTTAATT	NA	False	NA	-11	True	AATAAA	-12	NA	57366851	57350714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360795_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.5	chr17	-	4810	9	NIC	ENSMUSG00000046329.15	novel	3362	10	NA	NA	25	-5	intron_retention	FALSE	canonical	3	34	junction_5	5.53257399408268	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTGATTTTTAAT	NA	False	NA	-12	True	AATAAA	-11	NA	57366794	57350715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.6	chr17	-	1547	9	ISM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	-5	3342	-5	-2	5prime_fragment	FALSE	canonical	3	34	junction_5	5.53257399408268	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCTGTTTACCCATCAG	NA	False	NA	NA	False	CATAAA	-17	NA	57366868	57354052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.7	chr17	-	1017	7	NNC	ENSMUSG00000046329.15	novel	2298	2	NA	NA	-1283	-2422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1828402774396	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTCCAGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	57363668	57356616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57356847_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581
ES.15522.8	chr17	-	2278	8	ISM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	23	7928	-21	-4444	5prime_fragment	FALSE	canonical	3	34	junction_4	5.8970764115858	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACGAAGCCAGGTATGG	NA	False	NA	NA	False	NA	NA	NA	57366840	57358638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15522.9	chr17	-	1354	8	ISM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	12	8863	12	3662	5prime_fragment	FALSE	canonical	3	34	junction_4	5.8970764115858	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATGTTGGGTCTTGG	NA	False	NA	-60	True	NA	NA	NA	57366851	57359573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ES.15523.1	chr17	+	1185	4	ISM	ENSMUSG00000044279.16	ENSMUST00000071826.10	1194	5	2996	0	-130	0	3prime_fragment	TRUE	canonical	3	14	junction_1	93.9657147876584	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1396	False	NA	NA	False	AATAAA	-25	NA	57369100	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57369229_57369594_57369767_57370636_57370699_57372089
ES.15523.10	chr17	+	3749	3	NNC	ENSMUSG00000044279.16	novel	868	3	NA	NA	3	2208	intron_retention	FALSE	canonical	0	0	junction_2	111.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTGTGTTTAATT	1597	False	NA	NA	False	NA	NA	NA	57369301	57375126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57369767_57370636_57370884_57372089
ES.15523.11	chr17	+	1347	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	6	-485	6	0	multi-exon	FALSE	canonical	3	202	junction_2	10.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1600	False	NA	NA	False	AATAAA	-25	NA	57369304	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369767_57370636_57370699_57372089
ES.15523.12	chr17	+	1262	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163628.2	373	3	-147	-742	62	-6	multi-exon	FALSE	canonical	1	5	junction_2	109	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAGAAAAAAGATTTTAG	1656	False	NA	NA	False	AATAAA	-19	NA	57369360	57372906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369767_57370636_57370676_57372089
ES.15523.2	chr17	+	1166	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	34	6	-18	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1560	False	NA	NA	False	AATAAA	-25	NA	57369264	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
ES.15523.3	chr17	+	2401	3	NIC	ENSMUSG00000044279.16	novel	778	5	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	51	junction_2	86	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGATTTTAGCTGT	1560	False	NA	NA	False	AATAAA	-23	NA	57369264	57372910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57369767_57370636_57372234_57372608
ES.15523.4	chr17	+	3378	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	34	-2206	-18	2206	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTGTGTGTGTTTAA	1560	False	NA	NA	False	NA	NA	NA	57369264	57375124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
ES.15523.5	chr17	+	1140	4	NIC	ENSMUSG00000044279.16	novel	1206	4	NA	NA	-15	0	intron_retention	FALSE	canonical	1	5	junction_3	90.1147416723072	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1563	False	NA	NA	False	AATAAA	-25	NA	57369267	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57369374_57369594_57369767_57370636_57370676_57372089
ES.15523.6	chr17	+	3596	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	-30	-2698	-14	2207	multi-exon	FALSE	canonical	3	202	junction_2	10.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTGTGTTTAAT	1564	False	NA	NA	False	NA	NA	NA	57369268	57375125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369767_57370636_57370699_57372089
ES.15523.7	chr17	+	3349	4	NIC	ENSMUSG00000044279.16	novel	1206	4	NA	NA	-13	2205	intron_retention	FALSE	canonical	1	5	junction_3	90.1147416723072	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTGTGTGTGTGTTTA	1565	False	NA	NA	False	NA	NA	NA	57369269	57375123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57369374_57369594_57369767_57370636_57370676_57372089
ES.15523.8	chr17	+	1001	4	NIC	ENSMUSG00000044279.16	novel	778	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	51	junction_3	76.6130247122221	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1571	False	NA	NA	False	AATAAA	-25	NA	57369275	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57369767_57370636_57370699_57372089_57372234_57372608
ES.15523.9	chr17	+	774	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	-1	5	-1	0	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTTAGCTGTAA	1577	False	NA	NA	False	AATAAA	-25	NA	57369281	57372912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
ES.15524.1	chr17	-	3987	4	NIC	ENSMUSG00000117297.2	novel	219	2	NA	NA	-1327	2206	intron_retention	TRUE	canonical	3	31	junction_3	2.44948974278318	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATCTGGGGCTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	57377687	57373053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57373642_57373731_57374117_57374592_57377449_57377529
ES.15524.2	chr17	-	1412	8	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	987	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	6.23027499638758	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTATCTGGGGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	57377810	57373055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57373642_57373731_57373943_57374048_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
ES.15524.3	chr17	-	1406	7	NIC	ENSMUSG00000002668.9	novel	2521	24	NA	NA	1097	-3	intron_retention	FALSE	canonical	3	24	junction_3	5.29150262212918	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATGTATCTGGGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	57377700	57373057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57373642_57373731_57374117_57374592_57374701_57374788_57374834_57377112_57377185_57377407_57377449_57377529
ES.15525.1	chr17	-	2044	4	FSM	ENSMUSG00000062591.6	ENSMUST00000071135.6	2228	4	184	0	184	0	multi-exon	TRUE	canonical	0	0	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTCTGTTTGATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	57394598	57387065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57388748_57392991_57393103_57393230_57393340_57394456
ES.15526.1	chr17	+	1303	3	FSM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	-13	0	-13	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCCTTTTATTATTT	12	False	NA	NA	False	AATAAA	-10	NA	57412311	57414757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57412861_57413249_57413287_57414040
ES.15527.1	chr17	-	979	4	NNC	ENSMUSG00000079414.4	novel	1014	4	NA	NA	-8	10	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTTGTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57412930	57399024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57399770_57409087_57409154_57410349_57410485_57412897
ES.15527.2	chr17	-	905	3	FSM	ENSMUSG00000079414.4	ENSMUST00000233454.2	1560	3	-23	678	-3	-13	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAAGCCCCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	57412945	57399047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57399770_57410349_57410485_57412897
ES.15528.1	chr17	-	230	1	Intergenic	novelGene_12935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCTGCACTCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	57427324	57427094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57427100_57427300
ES.15529.1	chr17	-	2370	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	31	-337	5	0	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACGATCTGT	NA	False	NA	NA	False	NA	NA	NA	57554658	57541634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.10	chr17	-	2262	16	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-5	27	intron_retention	FALSE	canonical	3	119	junction_11	26.8920475647025	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554677	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.11	chr17	-	2149	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	17	27	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	52.7658447767114	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554646	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543644_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.12	chr17	-	2130	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	-7	282	-7	27	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554679	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.13	chr17	-	1891	12	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	3315	27	intron_retention	FALSE	canonical	3	119	junction_11	26.8580597195856	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57551348	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246
ES.15529.14	chr17	-	2149	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	5	27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	53.0246110311052	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554658	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544810_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.15	chr17	-	3556	12	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	27	27	intron_retention	FALSE	canonical	3	88	junction_8	36.2327188788721	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554636	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544002_57544205_57544324_57544423_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763
ES.15529.16	chr17	-	3461	13	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	6	27	intron_retention	FALSE	canonical	3	119	junction_9	27.7753887861578	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554657	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543741_57543870_57544002_57544205_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763
ES.15529.17	chr17	-	2107	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	12	-55	-5	27	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554677	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.18	chr17	-	3274	11	NIC	ENSMUSG00000005823.10	novel	2166	16	NA	NA	-5	27	intron_retention	FALSE	canonical	3	88	junction_6	37.8528730745765	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554677	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.2	chr17	-	3504	9	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	18	30	intron_retention	FALSE	canonical	3	119	junction_4	29.4339833355936	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57554645	57541913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.20	chr17	-	2928	13	NIC	ENSMUSG00000005823.10	novel	2166	16	NA	NA	25	27	intron_retention	FALSE	canonical	3	88	junction_8	36.0511788988932	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554638	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544002_57544205_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.21	chr17	-	2743	13	NNC	ENSMUSG00000005823.10	novel	2166	16	NA	NA	290	27	intron_retention	FALSE	canonical	2	6	junction_12	58.9507209455491	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554373	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543424_57543696_57543741_57543870_57544002_57544205_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554265
ES.15529.22	chr17	-	1994	17	NNC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	305	27	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	52.5403119042893	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554358	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
ES.15529.23	chr17	-	3276	11	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	5	27	intron_retention	FALSE	canonical	3	119	junction_6	29.9267438923783	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554658	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.24	chr17	-	3022	13	NIC	ENSMUSG00000005823.10	novel	2166	16	NA	NA	0	26	intron_retention	FALSE	canonical	3	88	junction_8	34.8985633260486	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554663	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543741_57543870_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.25	chr17	-	2159	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-4	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.2954251671755	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554676	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544960_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.26	chr17	-	2542	9	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	3315	26	intron_retention	FALSE	canonical	3	119	junction_8	31.4672448746311	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57551348	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57544002_57544205_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246
ES.15529.27	chr17	-	1979	16	NNC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	27	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.4757168581254	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554636	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57544200_57544324_57544423_57544498_57544810_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.28	chr17	-	2124	17	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-5	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	53.2494131423061	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554677	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545157_57549729_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.29	chr17	-	2400	16	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-5	26	intron_retention	FALSE	canonical	3	119	junction_11	27.1820202012695	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554677	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.30	chr17	-	2472	15	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	27	26	intron_retention	FALSE	canonical	3	88	junction_10	34.0822085372341	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGTGCGGAGCCCTG	NA	False	NA	-5	True	AATAAA	-44	NA	57554636	57541917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.31	chr17	-	2501	15	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	16	23	intron_retention	FALSE	canonical	3	119	junction_10	27.8311233796164	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAAGCTGTGCGGAGCC	NA	False	NA	-8	True	AATAAA	-41	NA	57554647	57541920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.32	chr17	-	2304	16	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	-5	20	intron_retention	FALSE	canonical	3	88	junction_11	31.954133796219	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTAAAGCTGTGCGGA	NA	False	NA	-11	True	AATAAA	-38	NA	57554677	57541923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.33	chr17	-	2692	13	NNC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	298	4	intron_retention	FALSE	canonical	3	11	junction_12	58.7189043002526	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGACCACCTGTTGA	NA	False	NA	-27	True	AATAAA	-22	NA	57554365	57541939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544324_57544423_57544498_57544850_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554304
ES.15529.34	chr17	-	2158	16	FSM	ENSMUSG00000005823.10	ENSMUST00000232778.2	2166	16	8	0	8	0	multi-exon	FALSE	canonical	3	88	junction_11	32.8610542875436	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGGGAGGACCACCTG	NA	False	NA	-31	True	AATAAA	-18	NA	57554655	57541943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.35	chr17	-	2286	15	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	17	0	intron_retention	FALSE	canonical	3	88	junction_10	33.8438792585204	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGGGAGGACCACCTG	NA	False	NA	-31	True	AATAAA	-18	NA	57554646	57541943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.37	chr17	-	1208	11	NNC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	4825	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.7987863958508	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGAGGGGAGGACCACC	NA	False	NA	-33	True	AATAAA	-16	NA	57549838	57541945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_57542255_57542964_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733
ES.15529.4	chr17	-	2798	14	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	27	30	intron_retention	FALSE	canonical	3	88	junction_9	34.8239868362541	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57554636	57541913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543741_57543870_57544002_57544205_57544324_57544423_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.5	chr17	-	2905	13	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	6	30	intron_retention	FALSE	canonical	3	119	junction_8	27.5650745207288	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCGGAGCCCTGTGCT	NA	False	NA	-1	True	AAAAAG	-41	NA	57554657	57541913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543424_57543696_57543741_57543870_57544324_57544423_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.6	chr17	-	2584	15	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-5	27	intron_retention	FALSE	canonical	3	119	junction_10	27.0419175748032	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554677	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.7	chr17	-	2882	13	NIC	ENSMUSG00000005823.10	novel	2064	17	NA	NA	5	27	intron_retention	FALSE	canonical	3	88	junction_8	34.8651170783763	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554658	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543424_57543696_57543741_57543870_57544324_57544423_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.8	chr17	-	2809	13	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	16	27	intron_retention	FALSE	canonical	3	119	junction_8	28.3150676417266	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554647	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.15529.9	chr17	-	2993	13	NIC	ENSMUSG00000005823.10	novel	2405	17	NA	NA	-7	27	intron_retention	FALSE	canonical	3	119	junction_8	28.7121731829705	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGCGGAGCCCTGT	NA	False	NA	-4	True	AATAAA	-45	NA	57554679	57541916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_57542367_57542922_57543048_57543155_57543741_57543870_57544002_57544205_57544324_57544423_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ES.1553.1	chr1	+	1171	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCATCTTTTGTGTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	151186473	151187644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151186500_151187600
ES.15530.1	chr17	+	2082	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-68	210	-41	28	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGGACCTTCAAAAGGC	NA	False	NA	41	True	TATAAA	-29	NA	57556413	57570455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ES.15530.11	chr17	+	5993	12	NIC	ENSMUSG00000019487.12	novel	2224	14	NA	NA	8	-7	intron_retention	FALSE	canonical	3	302	junction_10	32.5383435603734	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGTTCTTGGAGTCT	NA	False	NA	6	True	ATTAAA	-16	NA	57556509	57570420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57556572_57557741_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57568423_57568639_57568789_57569356_57569473_57569999
ES.15530.12	chr17	+	1404	8	ISM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	4776	243	201	-5	3prime_fragment	FALSE	canonical	3	302	junction_6	33.247985975523	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTCTTGGAGTCTGC	NA	False	NA	8	True	ATTAAA	-18	NA	57561257	57570422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ES.15530.3	chr17	+	2046	14	NNC	ENSMUSG00000019487.12	novel	2016	14	NA	NA	-13	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	117.878987191534	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATAAAGTTCTTGGAG	NA	False	NA	3	True	ATTAAA	-13	NA	57556441	57570417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57556572_57557741_57557858_57557927_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ES.15530.4	chr17	+	1977	13	NNC	ENSMUSG00000019487.12	novel	2016	14	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.189158716536	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATAAAGTTCTTGGAG	NA	False	NA	3	True	ATTAAA	-13	NA	57556442	57570417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57556572_57557741_57557874_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ES.15530.5	chr17	+	2241	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	-17	0	10	0	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGTGTGGAATAAATG	NA	False	NA	NA	False	GATAAA	-13	NA	57556464	57570665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ES.15530.8	chr17	+	1910	13	NIC	ENSMUSG00000019487.12	novel	2224	14	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	103.173666967669	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTCTTGGAGTCTGC	NA	False	NA	8	True	ATTAAA	-18	NA	57556495	57570422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_57556572_57557741_57557858_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ES.15531.1	chr17	+	229	1	Intergenic	novelGene_12936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCCACACATGTACTGT	NA	False	NA	NA	False	NA	NA	NA	57584818	57585047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57584800_57585000
ES.15532.1	chr17	+	2910	26	NNC	ENSMUSG00000034116.18	novel	2963	27	NA	NA	-25	-1	intron_retention	FALSE	canonical	0	0	junction_1	1.20266371026983	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCGTGTTCCAGACT	NA	False	NA	NA	False	AATAAA	-14	NA	57586074	57634952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57586402_57602981_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614033_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641_57631794_57634650
ES.15532.2	chr17	+	703	4	NNC	ENSMUSG00000034116.18	novel	2810	28	NA	NA	6424	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.942809041582063	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCGTGTTCCAGACT	NA	False	NA	NA	False	AATAAA	-14	NA	57625319	57634952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_57625454_57625627_57625743_57631641_57631794_57634650
ES.15533.1	chr17	-	209	1	Intergenic	novelGene_12937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAGGTGGAATGT	NA	False	NA	NA	False	NA	NA	NA	57607399	57607190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_57607200_57607400
ES.15534.1	chr17	+	3101	2	Intergenic	novelGene_12938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGAATTTGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	57892469	57896037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_57892738_57893204
ES.15535.1	chr17	+	182	1	Intergenic	novelGene_12939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAGAAATT	NA	False	NA	NA	False	NA	NA	NA	58216777	58216959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_58216800_58217000
ES.15536.1	chr17	-	4060	7	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	-49	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.5946325261921	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTAGCACATTCTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	59320312	59306611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314788_59316849_59317440_59318037_59318250_59320212
ES.15536.10	chr17	-	1628	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	41	2444	41	-1951	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTGTAAGTGTTCT	NA	False	NA	NA	False	CATAAA	-14	NA	59320326	59309056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ES.15536.11	chr17	-	2608	4	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	-29	-1684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.781130050226	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGTCATAGAGAAAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	59320292	59315073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59316399_59316448_59317440_59318037_59318250_59320212
ES.15536.12	chr17	-	1111	2	Intergenic	novelGene_12940	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGATTGTTGGGGAGT	NA	False	NA	NA	False	AATAAA	-8	NA	59316493	59315327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_59316414_59316468
ES.15536.2	chr17	-	3511	7	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.723082923316	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGTGTATTGTGT	NA	False	NA	-10	True	AATAAA	-28	NA	59320309	59307102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318091_59318250_59320212
ES.15536.3	chr17	-	3622	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	0	491	0	2	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTGTGTATTGTG	NA	False	NA	-11	True	AATAAA	-27	NA	59320367	59307103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ES.15536.4	chr17	-	3586	7	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	-45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.5642624202496	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTGTGTATTGTG	NA	False	NA	-11	True	AATAAA	-27	NA	59320308	59307103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320189
ES.15536.5	chr17	-	3141	8	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.4895156266486	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTGTTTGTGTATTGT	NA	False	NA	-12	True	AATAAA	-26	NA	59320324	59307104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59309287_59310323_59310524_59312796_59312849_59313498_59313613_59314618_59314787_59317338_59317440_59318037_59318250_59320212
ES.15536.6	chr17	-	3395	6	NIC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	51	-6	combination_of_known_splicesites	FALSE	canonical	3	3	junction_3	21.1886762210384	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTATTTTGTTTGT	NA	False	NA	-19	True	AATAAA	-19	NA	59320316	59307111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_59309287_59310323_59310524_59313498_59313613_59316849_59317440_59318037_59318250_59320212
ES.15536.8	chr17	-	6558	6	NNC	ENSMUSG00000024228.13	novel	4113	7	NA	NA	51	-30	intron_retention	TRUE	non_canonical	0	0	junction_3	22.3571017799714	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATCAACATAACAA	NA	False	NA	-43	True	TATAAA	-43	NA	59320316	59307135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_59309287_59310323_59310524_59313498_59316399_59316448_59317440_59318037_59318250_59320212
ES.15536.9	chr17	-	3385	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	51	677	51	-184	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTCAAATTCCTACT	NA	False	NA	NA	False	AATAAA	-25	NA	59320316	59307289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ES.15537.1	chr17	-	201	1	Intergenic	novelGene_12941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATGCTTCGATGTT	NA	False	NA	NA	False	NA	NA	NA	59421784	59421583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_59421600_59421800
ES.15538.1	chr17	-	178	1	Intergenic	novelGene_12942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	60586898	60586720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_60586700_60586900
ES.15539.1	chr17	+	184	1	Intergenic	novelGene_12943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60761944	60762128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_60761900_60762100
ES.1554.1	chr1	+	3483	15	NNC	ENSMUSG00000023150.15	novel	601	2	NA	NA	-712	-145	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	359.929478636908	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTGTTCAGCTTTC	NA	False	NA	24	True	ATTAAA	-34	NA	151219515	151240021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151219919_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.10	chr1	+	4904	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-28	3	intron_retention	FALSE	canonical	3	1145	junction_2	94.9643969411196	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220199	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.100	chr1	+	5336	13	NNC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_10	387.893339792726	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220300	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236806_151236893_151237026_151237212_151237387_151238862
ES.1554.103	chr1	+	4237	14	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	550.951989446046	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220328	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238860
ES.1554.104	chr1	+	4248	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	433.924540290897	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220358	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231793_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.105	chr1	+	3506	15	NNC	ENSMUSG00000023150.15	novel	601	2	NA	NA	213	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.929478636908	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220541	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220820_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.106	chr1	+	3701	14	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	6417	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	461.884575350537	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151226745	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231793_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.107	chr1	+	6712	8	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-7989	-158	intron_retention	FALSE	canonical	3	1212	junction_1	96.2329232134413	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTTTCAGAAGTGTT	NA	False	NA	11	True	ATTAAA	-21	NA	151229008	151240008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151229845_151230384_151230511_151231879_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.109	chr1	+	6917	6	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-6127	0	intron_retention	FALSE	canonical	3	1382	junction_4	21.9818106624545	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151230870	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.11	chr1	+	3491	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-28	-147	intron_retention	FALSE	canonical	3	1145	junction_2	102.114276395551	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTTTTGTTCAGCTT	NA	False	NA	22	True	ATTAAA	-32	NA	151220199	151240019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.110	chr1	+	3887	7	ISM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	12469	-148	-4200	148	3prime_fragment	FALSE	canonical	3	1339	junction_1	37.1842260463582	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTGTGTTTGGAACG	NA	False	NA	2	True	ATTAAA	-12	NA	151232797	151239264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.111	chr1	+	3978	5	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-4093	277	intron_retention	FALSE	canonical	3	13	junction_3	616.082380855028	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAGAAGTCCCTGCTC	NA	False	NA	15	True	AATAAA	-23	NA	151232904	151239393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151235929_151236468_151236591_151236682_151236810_151237212_151237387_151238862
ES.1554.112	chr1	+	4015	5	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-3628	-162	intron_retention	FALSE	canonical	3	13	junction_3	605.220775833084	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACCCCTTTTCAGAAG	NA	False	NA	7	True	ATTAAA	-17	NA	151233369	151240004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151235503_151235703_151235929_151236468_151236810_151237212_151237387_151238862
ES.1554.113	chr1	+	3075	3	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-2079	-157	intron_retention	FALSE	canonical	3	1437	junction_2	4.5	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151234918	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151235929_151236468_151237387_151238862
ES.1554.114	chr1	+	2527	5	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-2031	-162	intron_retention	FALSE	canonical	3	13	junction_3	616.082380855028	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACCCCTTTTCAGAAG	NA	False	NA	7	True	ATTAAA	-17	NA	151234966	151240004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151235929_151236468_151236591_151236682_151236810_151237212_151237387_151238862
ES.1554.115	chr1	+	4054	1	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-1045	-160	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCCTTTTCAGAAGTG	NA	False	NA	9	True	ATTAAA	-19	NA	151235952	151240006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151236000_151240000
ES.1554.116	chr1	+	1738	4	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	16413	0	-316	0	3prime_fragment	FALSE	canonical	3	1382	junction_2	23.7627158941622	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151236681	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.12	chr1	+	2987	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	-28	552	-28	505	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAGTCTTTTATGAT	NA	False	NA	NA	False	ATTAAA	-21	NA	151220199	151239621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.13	chr1	+	4526	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-129	-1082	-28	25	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTCAGTTCATT	NA	False	NA	42	True	AGTAAA	-30	NA	151220199	151240198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.14	chr1	+	3699	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-21	22	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_8	421.06447117857	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTCACTCAGTTC	NA	False	NA	39	True	ATTAAA	-43	NA	151220206	151240195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.17	chr1	+	3397	14	NNC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	375.486319765928	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220214	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231873_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.18	chr1	+	7916	13	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	-9	-145	intron_retention	FALSE	canonical	3	234	junction_7	328.070484889384	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTGTTCAGCTTTC	NA	False	NA	24	True	ATTAAA	-34	NA	151220218	151240021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.19	chr1	+	3375	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	374.71355529352	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCTTGCACTGTGGGA	NA	False	NA	9	True	ATTAAA	-13	NA	151220225	151240165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.2	chr1	+	3750	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-706	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	350.026183147617	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTCACTCAGTTC	NA	False	NA	39	True	ATTAAA	-43	NA	151219521	151240195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151219919_151220407_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.20	chr1	+	8101	13	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	1	-156	intron_retention	FALSE	canonical	3	1145	junction_2	95.920974418181	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220228	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.22	chr1	+	6883	13	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	1145	junction_2	91.4758620256368	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220231	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151229845_151230384_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.23	chr1	+	3355	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	7	-157	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	529.3595861308	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220234	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231879_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.24	chr1	+	3197	13	NIC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	385.298369232642	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220234	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.25	chr1	+	3340	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	7	-158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	362.067426632901	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTTTCAGAAGTGTT	NA	False	NA	11	True	ATTAAA	-21	NA	151220234	151240008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229852_151230390_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.26	chr1	+	3494	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	-22	-689	10	689	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATAGCGTGTGTAGCT	NA	False	NA	NA	False	ATTAAA	-35	NA	151220237	151233239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ES.1554.27	chr1	+	3771	16	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	11	-146	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	433.374233967211	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTTGTTCAGCTTT	NA	False	NA	23	True	ATTAAA	-33	NA	151220238	151240020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231600_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.28	chr1	+	3329	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	11	-157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	356.927963920693	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220238	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229677_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.29	chr1	+	3217	14	NNC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	11	-156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	375.486319765928	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220238	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231873_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.3	chr1	+	3285	15	NNC	ENSMUSG00000023150.15	novel	601	2	NA	NA	-369	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.929478636908	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151219858	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151219919_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.30	chr1	+	3264	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	11	-159	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	361.157408160746	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220238	151240007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235773_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.31	chr1	+	2786	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	13	712	13	345	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTCTTAAGAGGCAAGA	NA	False	NA	83	True	ATTAAA	-16	NA	151220240	151239461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.32	chr1	+	3336	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-14	-159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	359.462020076601	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220245	151240007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236600_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.33	chr1	+	3209	14	NNC	ENSMUSG00000023150.15	novel	3337	14	NA	NA	-13	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	491.047449472183	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCCTTTTCAGAAGTG	NA	False	NA	9	True	ATTAAA	-19	NA	151220246	151240006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235939_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.34	chr1	+	4695	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-10	-156	intron_retention	FALSE	canonical	3	1145	junction_2	94.9643969411196	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220249	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.35	chr1	+	3380	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-10	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	470.80788249797	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220249	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226591_151226647_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.36	chr1	+	3620	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-10	25	intron_retention	FALSE	canonical	3	1145	junction_2	102.114276395551	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTCAGTTCATT	NA	False	NA	42	True	AGTAAA	-30	NA	151220249	151240198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.37	chr1	+	10832	10	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	-8	-157	intron_retention	FALSE	canonical	3	1145	junction_2	88.9491462425804	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220251	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.38	chr1	+	3586	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	433.374233967211	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220255	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231028_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.39	chr1	+	3251	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	372.047063893104	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220255	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.4	chr1	+	3588	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	-227	150	-227	-143	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGTTCAGCTTTCTT	NA	False	NA	26	True	ATTAAA	-36	NA	151220000	151240023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.40	chr1	+	3313	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-4	-157	at_least_one_novel_splicesite	FALSE	canonical	1	79	junction_11	339.909231581441	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220255	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236688_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.41	chr1	+	2575	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	28	908	-4	149	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGTGTTTGGAACGG	NA	False	NA	3	True	ATTAAA	-13	NA	151220255	151239265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.43	chr1	+	3185	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-4	-159	combination_of_known_splicesites	FALSE	canonical	3	13	junction_12	367.629508637843	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220255	151240007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151237212_151237387_151238862
ES.1554.44	chr1	+	3206	14	FSM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	-12	143	-3	-143	multi-exon	FALSE	canonical	3	49	junction_6	362.778266997786	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGTTCAGCTTTCTT	NA	False	NA	26	True	ATTAAA	-36	NA	151220256	151240023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.45	chr1	+	3200	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-3	-145	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	374.71355529352	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTGTTCAGCTTTC	NA	False	NA	24	True	ATTAAA	-34	NA	151220256	151240021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.46	chr1	+	4168	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-3	-156	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	432.641416828712	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220256	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231767_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.47	chr1	+	2572	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-3	277	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	374.71355529352	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAGAAGTCCCTGCTC	NA	False	NA	15	True	AATAAA	-23	NA	151220256	151239393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.48	chr1	+	2852	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-3	282	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_8	421.06447117857	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCCCTGCTCCTCCA	NA	False	NA	20	True	AATAAA	-28	NA	151220256	151239398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.5	chr1	+	4405	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-183	-907	-82	-143	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGTTCAGCTTTCTT	NA	False	NA	26	True	ATTAAA	-36	NA	151220145	151240023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.50	chr1	+	7665	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	-3	-157	intron_retention	FALSE	canonical	3	234	junction_7	315.662148057027	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220256	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.51	chr1	+	3259	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-2	-149	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_7	340.474818512054	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTGTTTTGTTCAGC	NA	False	NA	20	True	ATTAAA	-30	NA	151220257	151240017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230445_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.52	chr1	+	3387	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-1	-156	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	433.557603503336	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220258	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151230988_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.53	chr1	+	4377	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	-1	-164	intron_retention	FALSE	canonical	3	234	junction_6	315.461922982903	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGCACCCCTTTTCAGA	NA	False	NA	5	True	ATTAAA	-15	NA	151220258	151240002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.54	chr1	+	3407	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_7	340.474818512054	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220258	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230445_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.55	chr1	+	3336	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	-157	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_8	357.552686284676	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220259	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151232009_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.56	chr1	+	4157	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	0	-147	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	463.036798670556	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTTTTGTTCAGCTT	NA	False	NA	22	True	ATTAAA	-32	NA	151220259	151240019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.57	chr1	+	3890	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-68	-507	1	507	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGTCTTTTATGATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	151220260	151239623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.58	chr1	+	3566	17	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	1	-146	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	571.819027315461	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTTGTTCAGCTTT	NA	False	NA	23	True	ATTAAA	-33	NA	151220260	151240020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231600_151231767_151231879_151231988_151235372_151235503_151235773_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.6	chr1	+	3614	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	-78	-25	-78	25	multi-exon	FALSE	canonical	3	1145	junction_2	98.7764172879585	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCACTCAGTTCATT	NA	False	NA	42	True	AGTAAA	-30	NA	151220149	151240198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.60	chr1	+	8225	13	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	4	3	intron_retention	FALSE	canonical	3	1145	junction_2	95.920974418181	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220263	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.61	chr1	+	8210	13	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	4	-145	intron_retention	FALSE	canonical	3	234	junction_6	327.918562044501	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTGTTCAGCTTTC	NA	False	NA	24	True	ATTAAA	-34	NA	151220263	151240021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151230511_151230917_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.62	chr1	+	4319	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	432.641416828712	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220264	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231767_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.64	chr1	+	3033	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-3	507	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	433.374233967211	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGTCTTTTATGATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	151220265	151239623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231028_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.65	chr1	+	3410	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-2	-159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	524.589846133784	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220266	151240007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231028_151231879_151231982_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.68	chr1	+	3536	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-59	-162	1	162	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACGGAATGCAAAGATGA	NA	False	NA	16	True	ATTAAA	-26	NA	151220269	151239278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.69	chr1	+	4196	15	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	1	-158	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	446.996598626515	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTTTCAGAAGTGTT	NA	False	NA	11	True	ATTAAA	-21	NA	151220269	151240008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235773_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.7	chr1	+	2856	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	-71	-2	-39	2	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCTGTAGCCTTTTATT	NA	False	NA	13	True	ATTAAA	-30	NA	151220188	151232552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ES.1554.71	chr1	+	3502	15	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	448.518149702155	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220269	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.72	chr1	+	2872	7	NIC	ENSMUSG00000023150.15	novel	2783	8	NA	NA	2	-6	intron_retention	FALSE	canonical	3	234	junction_6	423.278244447104	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGAGTTACGTCTGTAGC	NA	False	NA	5	True	ATTAAA	-22	NA	151220270	151232544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151230917
ES.1554.73	chr1	+	3658	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	-56	-287	4	287	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTCCTCCACATTT	NA	False	NA	25	True	AATAAA	-33	NA	151220272	151239403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.74	chr1	+	4170	16	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	5	-165	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	429.356955871866	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCACCCCTTTTCAG	NA	False	NA	4	True	ATTAAA	-14	NA	151220273	151240001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220323_151220407_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.75	chr1	+	3333	14	FSM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	5	-1	5	1	multi-exon	FALSE	canonical	3	49	junction_6	362.778266997786	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCACTGTGGGATT	NA	False	NA	11	True	ATTAAA	-15	NA	151220273	151240167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.76	chr1	+	3415	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	350.026183147617	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCCTTGCACTGTGGG	NA	False	NA	8	True	ATTAAA	-12	NA	151220273	151240164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862_151239133_151239173
ES.1554.78	chr1	+	3293	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	5	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	359.929478636908	1266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220273	151240007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225132_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.79	chr1	+	9860	10	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	7	278	intron_retention	FALSE	canonical	3	13	junction_8	432.95935429222	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGAAGTCCCTGCTCC	NA	False	NA	16	True	AATAAA	-24	NA	151220275	151239394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151237212_151237387_151238862
ES.1554.8	chr1	+	3420	13	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-38	0	intron_retention	FALSE	canonical	1	1	junction_1	386.797176250752	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220189	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.80	chr1	+	3330	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	373.176418136589	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220275	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.81	chr1	+	3323	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	350.026183147617	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220275	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862_151239430_151239565
ES.1554.82	chr1	+	3070	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	8	-157	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	372.047063893104	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220276	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.84	chr1	+	3878	16	NNC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	433.374233967211	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220277	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231600_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.85	chr1	+	3222	17	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	9	507	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	508.667864223552	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGTCTTTTATGATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	151220277	151239623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231600_151231767_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.86	chr1	+	5132	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	18	-2367	9	2367	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATGCCTCTGATTGAT	NA	False	NA	NA	False	AATAAA	-2	NA	151220277	151234917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ES.1554.87	chr1	+	2551	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	10	280	combination_of_known_splicesites	FALSE	canonical	3	13	junction_12	367.629508637843	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAAGTCCCTGCTCCTC	NA	False	NA	18	True	AATAAA	-26	NA	151220278	151239396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151237212_151237387_151238862
ES.1554.88	chr1	+	3168	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	10	-156	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	373.176418136589	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220278	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.9	chr1	+	3523	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	-30	-156	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_8	421.06447117857	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCAGAAGTGTTTT	NA	False	NA	13	True	ATTAAA	-23	NA	151220197	151240010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.90	chr1	+	3047	13	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	13	-157	combination_of_known_splicesites	FALSE	canonical	1	41	junction_3	371.596658204684	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220281	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.91	chr1	+	3474	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	13	3	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_8	357.552686284676	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGTGGGATTTA	NA	False	NA	13	True	ATTAAA	-17	NA	151220281	151240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151232009_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.93	chr1	+	3339	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	375.740672877502	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCTTGCACTGTGGGA	NA	False	NA	9	True	ATTAAA	-13	NA	151220283	151240165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.95	chr1	+	5194	13	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	21	-157	intron_retention	FALSE	canonical	3	1145	junction_2	88.2157629527361	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220289	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.96	chr1	+	3997	13	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	25	-157	combination_of_known_splicesites	FALSE	canonical	1	41	junction_3	462.628803385849	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTTCAGAAGTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	151220293	151240009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.1554.97	chr1	+	8563	9	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	28	507	intron_retention	FALSE	canonical	3	1145	junction_2	98.9380330055131	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGTCTTTTATGATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	151220296	151239623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151235929_151236468_151237026_151237212_151237387_151238862
ES.1554.99	chr1	+	7778	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	-28	0	intron_retention	FALSE	canonical	3	234	junction_7	315.662148057027	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220300	151240166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ES.15540.1	chr17	-	2474	2	NNC	ENSMUSG00000048915.13	novel	4032	5	NA	NA	274228	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTATGTCTTTTGTAAG	NA	False	NA	NA	False	AATAAA	-12	NA	62913911	62911177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_62911740_62911999
ES.15541.1	chr17	-	2667	1	Intergenic	novelGene_12944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCACTCATACATTAA	NA	False	NA	NA	False	NA	NA	NA	63155669	63153002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63153000_63155700
ES.15542.1	chr17	+	184	1	Intergenic	novelGene_12945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGTACATGGGGA	NA	False	NA	NA	False	NA	NA	NA	63232823	63233007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_63232800_63233000
ES.15543.1	chr17	-	1162	1	Intergenic	novelGene_12946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	63362237	63361075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63361100_63362200
ES.15544.1	chr17	+	3899	1	Antisense	novelGene_ENSMUSG00000023965.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAACTGTGCTA	NA	False	NA	NA	False	CATAAA	-43	NA	63384741	63388640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_63384700_63388600
ES.15545.1	chr17	+	6146	2	Antisense	novelGene_ENSMUSG00000023965.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACAAAATCCCCTGGA	NA	False	NA	NA	False	NA	NA	NA	63728869	63735077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_63730253_63730314
ES.15546.1	chr17	+	1466	1	Intergenic	novelGene_12950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATTTTAAAATAACTTT	NA	False	NA	NA	False	NA	NA	NA	63792867	63794333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_63792900_63794300
ES.15547.1	chr17	+	4062	1	Antisense	novelGene_ENSMUSG00000023965.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	63797306	63801368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_63797300_63801400
ES.15548.1	chr17	-	5198	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-325	52	-325	-52	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCTTCATGGATGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	63807337	63364498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ES.15548.10	chr17	-	2437	1	Intergenic	novelGene_12948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTACATTTAGATTACGT	NA	False	NA	NA	False	AATAAA	-12	NA	63784067	63781630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63781600_63784100
ES.15548.11	chr17	-	1849	1	Intergenic	novelGene_12949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCAGTTTGGCTGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	63791517	63789668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63789700_63791500
ES.15548.12	chr17	-	1716	3	ISM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-278	430196	-278	-102668	5prime_fragment	FALSE	canonical	3	61	junction_1	3	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGTTGTTGCATTAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	63807290	63794642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_63794965_63797759_63797883_63806019
ES.15548.3	chr17	-	3296	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-386	2015	-386	-529	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	-7	True	AATAAA	-24	NA	63807398	63366461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ES.15548.4	chr17	-	1980	9	FSM	ENSMUSG00000023965.14	ENSMUST00000112840.2	3667	9	0	1687	0	-531	multi-exon	FALSE	canonical	0	0	junction_8	19.6277864263905	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGTTCGCTTTTAC	NA	False	NA	-9	True	AATAAA	-22	NA	63799748	63366463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63799683
ES.15548.5	chr17	-	3115	8	NIC	ENSMUSG00000023965.14	novel	4925	9	NA	NA	-352	-533	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.2718075376393	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACACTGTGTTCGCTTTT	NA	False	NA	-11	True	AATAAA	-20	NA	63807364	63366465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_63367407_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ES.15548.6	chr17	-	3207	10	NNC	ENSMUSG00000023965.14	novel	4925	9	NA	NA	-382	-534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.176245593487	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACACTGTGTTCGCTTT	NA	False	NA	-12	True	AATAAA	-19	NA	63807394	63366466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019_63807105_63807184
ES.15548.7	chr17	-	2906	9	NNC	ENSMUSG00000023965.14	novel	376	3	NA	NA	-352	-4343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.3373885983427	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGCTAATGTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	63807364	63370275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_63370865_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ES.15548.8	chr17	-	179	1	Intergenic	novelGene_12947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	63404721	63404542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63404500_63404700
ES.15548.9	chr17	-	2767	7	Fusion	ENSMUSG00000023965.14_ENSMUSG00000090565.8	novel	376	3	NA	NA	-325	4	intron_retention	FALSE	canonical	0	0	junction_1	22.9177272481855	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTGAATGTGAATCTT	NA	False	NA	NA	False	NA	NA	NA	63807337	63612436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_63613134_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ES.15549.1	chr17	+	155	1	Intergenic	novelGene_12951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	63812389	63812544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_63812400_63812500
ES.1555.1	chr1	-	1395	1	FSM	ENSMUSG00000100954.6	ENSMUST00000186597.2	2498	1	-22	1125	-22	-1125	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCCCCCTCTGGT	NA	False	NA	NA	False	CATAAA	-17	NA	151221004	151219609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151219600_151221000
ES.15550.1	chr17	+	178	1	Intergenic	novelGene_12952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTGGAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	63820887	63821065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_63820900_63821100
ES.15551.1	chr17	-	176	1	Intergenic	novelGene_12953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATGAATGCCT	NA	False	NA	NA	False	NA	NA	NA	63838994	63838818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_63838800_63839000
ES.15552.1	chr17	+	4498	2	Antisense	novelGene_ENSMUSG00000117014.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTCCTTCAGTGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	63978500	64027255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_63979792_64024048
ES.15552.2	chr17	+	2689	3	Antisense	novelGene_ENSMUSG00000117014.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTACTTAGTTTTGTTT	NA	False	NA	NA	False	AAAACA	-18	NA	63978743	64057601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_63979296_63979397_63979792_64055858
ES.15553.1	chr17	+	2832	19	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-17011	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.3946859123568	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGCTAACCACAGCAACC	NA	False	NA	9	True	AATAAA	-20	NA	64153045	64446197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64153162_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.10	chr17	+	5984	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-17	2919	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTATACCATTAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	64170992	64449410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.12	chr17	+	9752	16	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-15	7022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.5583648685758	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGCCGTGTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	64170994	64453513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288617_64298588_64298712_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.13	chr17	+	10089	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-15	7023	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCGTGTCTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	64170994	64453514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.14	chr17	+	3120	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-10	62	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCGTGTCATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	64170999	64446553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.15	chr17	+	4622	17	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-9	1836	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	46.1652940530005	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGTCACGGTTCCTTA	NA	False	NA	NA	False	NA	NA	NA	64171000	64448327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.16	chr17	+	3702	16	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-9	41937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.5638258075661	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAATTATCTTATGTAT	NA	False	NA	NA	False	AAGAAA	-7	NA	64171000	64387520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231061_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846
ES.15553.17	chr17	+	4076	16	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-8	42304	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	25.0244325054979	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGCGATGGCATGTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	64171001	64387887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846
ES.15553.18	chr17	+	2991	19	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	58.0444965543411	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTGGACTTCCTAGGG	NA	False	NA	NA	False	TATAAA	-19	NA	64171004	64446490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171055_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288617_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.19	chr17	+	3640	16	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-4	41937	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	46.5761025992228	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAATTATCTTATGTAT	NA	False	NA	NA	False	AAGAAA	-7	NA	64171005	64387520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288617_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846
ES.15553.2	chr17	+	2812	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-49	11	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAACCCTGCCA	NA	False	NA	15	True	AATAAA	-26	NA	64170960	64446203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.20	chr17	+	3679	16	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-4	41911	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	25.0244325054979	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64171005	64387494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846
ES.15553.21	chr17	+	2496	18	NIC	ENSMUSG00000000127.16	novel	2948	15	NA	NA	-2	11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	47.1112942768813	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAACCCTGCCA	NA	False	NA	15	True	AATAAA	-26	NA	64171007	64446203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.23	chr17	+	5860	19	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	16	2918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8731606035453	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTACTATACCATTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	64171025	64449409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288592_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.25	chr17	+	5759	18	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	18	2900	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	44.4873140037296	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCCTCTTATTAACAG	NA	False	NA	NA	False	AATAAA	-1	NA	64171027	64449391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.26	chr17	+	5032	1	Intergenic	novelGene_12955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAACCCAACCAA	NA	False	NA	NA	False	NA	NA	NA	64207652	64212684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_64207700_64212700
ES.15553.27	chr17	+	5792	11	NNC	ENSMUSG00000000127.16	novel	2913	18	NA	NA	3319	2900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	54.3607395093187	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCCTCTTATTAACAG	NA	False	NA	NA	False	AATAAA	-1	NA	64248285	64449391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64445372_64445426
ES.15553.28	chr17	+	4027	4	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	140796	-3218	140796	2919	3prime_fragment	FALSE	canonical	3	158	junction_2	15.369522511198	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTATACCATTAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	64385762	64449410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.29	chr17	+	1107	4	NNC	ENSMUSG00000000127.16	novel	2913	18	NA	NA	161735	61	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	76.6913003903021	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTCATTTTGT	NA	False	NA	NA	False	NA	NA	NA	64406701	64446552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64406848_64440435_64440591_64444704_64444828_64445869
ES.15553.3	chr17	+	2625	18	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-45	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	47.768110571209	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGCTAACCACAGCAACC	NA	False	NA	9	True	AATAAA	-20	NA	64170964	64446197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.30	chr17	+	685	4	NNC	ENSMUSG00000000127.16	novel	2913	18	NA	NA	161796	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	76.6913003903021	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGTATTAGCTAACCACA	NA	False	NA	3	True	AATAAA	-14	NA	64406762	64446191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64406848_64440435_64440591_64444704_64444828_64445869
ES.15553.4	chr17	+	2625	16	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	46.7364240537649	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGACTTCCTAGGGTTT	NA	False	NA	NA	False	TATAAA	-22	NA	64170976	64446493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248434_64336280_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.5	chr17	+	4551	9	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-32	2920	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	60.7915238746324	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTATACCATTAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	64170977	64449411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64171051_64203012_64203279_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15553.6	chr17	+	2482	16	NNC	ENSMUSG00000000127.16	novel	2948	15	NA	NA	-30	-215	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	47.9675816451996	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTGTAGGTTCCTTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	64170979	64345368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64344940
ES.15553.8	chr17	+	5192	12	NNC	ENSMUSG00000000127.16	novel	2948	15	NA	NA	-23	-52105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	49.2606493080221	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGGTACATTTACAC	NA	False	NA	NA	False	NA	NA	NA	64170986	64293478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64289945
ES.15553.9	chr17	+	2936	20	NNC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	-17	21	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	52.0526581874234	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGCCATTTGATACCG	NA	False	NA	25	True	AATAAA	-36	NA	64170992	64446213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64171051_64184991_64185138_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ES.15554.1	chr17	-	176	1	Intergenic	novelGene_12954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCTGAAGGTCTGC	NA	False	NA	NA	False	NA	NA	NA	64173510	64173334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_64173300_64173500
ES.15555.1	chr17	-	2435	1	Intergenic	novelGene_12956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64415716	64413281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_64413300_64415700
ES.15556.1	chr17	+	177	1	Intergenic	novelGene_12957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATCTGTTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	64561796	64561973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_64561800_64562000
ES.15557.1	chr17	-	4826	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	-81	-5	-81	5	multi-exon	FALSE	canonical	3	104	junction_6	24	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACCCTATCACTTC	NA	False	NA	2	True	AATAAA	-35	NA	64638992	64587994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.10	chr17	-	4757	11	NNC	ENSMUSG00000024083.17	novel	4740	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.0441115410472	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCATTTCTAATATTTA	NA	False	NA	-19	True	AATAAA	-14	NA	64638856	64588015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604207_64604296_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.11	chr17	-	4398	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-4	94	-4	-94	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGTCTAACTGTGATG	NA	False	NA	-112	True	AATATA	-37	NA	64638864	64588108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.12	chr17	-	3914	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	45	781	-6	-766	multi-exon	FALSE	canonical	3	104	junction_6	24	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCCACATGTTATGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	64638866	64588780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.13	chr17	-	3723	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	39	978	10	-963	multi-exon	FALSE	canonical	3	104	junction_6	24	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTACTCTGTGATCTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	64638872	64588977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.14	chr17	-	2512	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-14	1990	8	-1990	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCTCACTGGTCCCT	NA	False	NA	-1	True	AATAAA	-15	NA	64638874	64590004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.15	chr17	-	2686	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	49	2005	-2	-1990	multi-exon	FALSE	canonical	3	104	junction_6	24	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCTCACTGGTCCCT	NA	False	NA	-1	True	AATAAA	-15	NA	64638862	64590004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.16	chr17	-	3520	5	FSM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	21	18	-1	-18	multi-exon	FALSE	canonical	3	104	junction_1	27.4681633896407	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATAACTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	64638861	64602819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.17	chr17	-	2865	6	NNC	ENSMUSG00000024083.17	novel	3559	5	NA	NA	0	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2055212386191	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTAGCATTGAGTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	64638860	64603050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_64604296_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.18	chr17	-	3289	5	FSM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	18	252	-4	-252	multi-exon	FALSE	canonical	3	104	junction_1	27.4681633896407	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGTTAGCATTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	64638864	64603053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.19	chr17	-	5881	4	ISM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	17	8373	-5	-8373	5prime_fragment	FALSE	canonical	3	161	junction_1	4.92160768674447	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	64638865	64611174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.20	chr17	-	4218	2	NNC	ENSMUSG00000024083.17	novel	4740	10	NA	NA	3365	-8373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	64616661	64611174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_64614348_64615616
ES.15557.21	chr17	-	3672	4	ISM	ENSMUSG00000024083.17	ENSMUST00000232842.2	3559	5	22	10577	0	-10577	5prime_fragment	FALSE	canonical	3	161	junction_1	4.92160768674447	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAATAATTTATGACA	NA	False	NA	NA	False	ATTAAA	-13	NA	64638860	64613378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.3	chr17	-	4580	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	-77	-15	-26	0	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTGTGACCCTATC	NA	False	NA	-3	True	AATAAA	-30	NA	64638937	64587999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ES.15557.7	chr17	-	3276	7	NNC	ENSMUSG00000024083.17	novel	4488	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	55.4606967941162	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638870	64588014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604861_64638790
ES.15557.8	chr17	-	4490	9	NIC	ENSMUSG00000024083.17	novel	4740	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	51.8505966696623	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638877	64588014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64619995_64620114_64638790
ES.15557.9	chr17	-	4725	11	NNC	ENSMUSG00000024083.17	novel	4740	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.4388120333284	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCATTTCTAATATTTA	NA	False	NA	-19	True	AATAAA	-14	NA	64638870	64588015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64637825_64637868_64638790
ES.15558.1	chr17	-	165	1	Intergenic	novelGene_12958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATTCATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	64694192	64694027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_64694000_64694200
ES.15559.1	chr17	+	1124	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	64841648	64843388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_64841801_64842416
ES.15559.2	chr17	+	1042	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	64841660	64843388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_64841731_64842416
ES.15559.3	chr17	+	2832	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCAAAGTCTGGAGTAGC	NA	False	NA	NA	False	AATAAA	-13	NA	64841674	64845192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_64841731_64842416
ES.15559.4	chr17	+	1706	1	Intergenic	novelGene_12959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	64841681	64843387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_64841700_64843400
ES.1556.1	chr1	-	177	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGAAACCTG	NA	False	NA	NA	False	NA	NA	NA	151224188	151224011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151224000_151224200
ES.15560.1	chr17	+	7074	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-82	-1	-82	1	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTCTGGAGTAATTC	NA	False	NA	10	True	AATAAA	-20	NA	64907648	65062106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.10	chr17	+	8066	21	NIC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	-5	2	intron_retention	FALSE	canonical	3	46	junction_3	8.20365772079747	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTCTGGAGTAATTCT	NA	False	NA	11	True	AATAAA	-21	NA	64907725	65062107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.11	chr17	+	6752	21	NIC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	54	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.8097280179009	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTCTTCTGGAGTAA	NA	False	NA	7	True	AATAAA	-17	NA	64907784	65062103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.12	chr17	+	4985	16	ISM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	66000	1	-46684	-1	3prime_fragment	FALSE	canonical	3	51	junction_1	8.51404069105198	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTCTTCTGGAGTAAT	NA	False	NA	8	True	AATAAA	-18	NA	64973730	65062104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.13	chr17	+	2690	1	NIC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	38793	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGTGCATTGTCTTCT	NA	False	NA	0	True	AATAAA	-10	NA	65059406	65062096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_65059400_65062100
ES.15560.2	chr17	+	7662	22	NNC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	15.3340727417106	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907677	65062105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047056_65047879_65057778_65057890_65059408
ES.15560.3	chr17	+	5321	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-42	1712	-42	-1440	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAAATCTTATTACTG	NA	False	NA	NA	False	AATAAA	-23	NA	64907688	65060393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.4	chr17	+	6597	23	NNC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	15.1941294666043	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTCTTCTGGAGTAA	NA	False	NA	7	True	AATAAA	-17	NA	64907694	65062103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408_65060201_65060628
ES.15560.5	chr17	+	4599	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-29	2421	-29	-2149	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	64907701	65059684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.6	chr17	+	6793	21	NNC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.6648491853576	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907703	65062105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_64908866_64931522_64931775_64932301_64932391_64958187_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.7	chr17	+	6845	21	NIC	ENSMUSG00000024085.14	novel	6991	22	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.6648491853576	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907704	65062105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_64908866_64931522_64931775_64932301_64932447_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15560.8	chr17	+	5551	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	-15	1455	-15	-1183	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAAGTTGAAGCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	64907715	65060650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ES.15561.1	chr17	-	2176	1	Antisense	novelGene_ENSMUSG00000024085.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAACA	NA	False	NA	NA	False	AATAGA	-30	NA	65022574	65020398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_65020400_65022600
ES.15562.1	chr17	-	4440	2	Intergenic	novelGene_12960	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	65468563	65461773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_65465151_65467500
ES.15563.1	chr17	+	178	1	Intergenic	novelGene_12961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65701825	65702003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_65701800_65702000
ES.15564.1	chr17	+	699	1	Intergenic	novelGene_12962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	65775092	65775791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_65775100_65775800
ES.15565.1	chr17	+	212	1	Intergenic	novelGene_12964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAATGTAACAA	NA	False	NA	14	True	NA	NA	NA	65863579	65863791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_65863600_65863800
ES.15566.1	chr17	-	3196	3	Intergenic	novelGene_12963	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTTGGCAGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	65871225	65863200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_65865907_65866001_65866085_65870818
ES.15567.1	chr17	-	170	1	Intergenic	novelGene_12965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGAGCGAGCAGGGC	8390	False	NA	NA	False	NA	NA	NA	65877385	65877215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_65877200_65877400
ES.15568.1	chr17	+	208	1	Intergenic	novelGene_12966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTCCACATCCT	NA	False	NA	NA	False	NA	NA	NA	65883347	65883555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_65883300_65883600
ES.15569.1	chr17	-	4904	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	63	-1598	63	1598	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGATTTCCTCTCTGT	3026	False	NA	NA	False	AATAGA	-17	NA	65920487	65883723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.10	chr17	-	1779	7	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	-14	366	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	1604.61529657423	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2949	False	NA	-6	True	AATAAA	-25	NA	65920564	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65889574_65889749_65894038_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.12	chr17	-	1456	5	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	12	366	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1512.96916277233	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2975	False	NA	-6	True	AATAAA	-25	NA	65920538	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.14	chr17	-	4055	4	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	12	365	intron_retention	FALSE	canonical	3	3450	junction_1	26.7124606795322	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTTTGTGTCTGTCA	2975	False	NA	-7	True	AATAAA	-24	NA	65920538	65887049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65889574_65889749_65899285_65902050_65920214
ES.15569.15	chr17	-	1652	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	12	364	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	1387.58774857664	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTGTTTGTGTCTGTC	2975	False	NA	-8	True	AATAAA	-23	NA	65920538	65887050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889773_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.17	chr17	-	2313	5	ISM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	17492	1729	-1093	364	3prime_fragment	FALSE	canonical	3	3309	junction_3	117.199349400925	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTGTTTGTGTCTGTC	NA	False	NA	-8	True	AATAAA	-23	NA	65903058	65887050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896
ES.15569.18	chr17	-	1601	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	27	364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1393.84739480332	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTGTTTGTGTCTGTC	2990	False	NA	-8	True	AATAAA	-23	NA	65920523	65887050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902038_65920214
ES.15569.19	chr17	-	1517	5	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	30	362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1510.38113981207	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATAGCTTGTTTGTGTCTG	2993	False	NA	-10	True	AATAAA	-21	NA	65920520	65887052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889749_65899285_65899367_65901883_65902050_65920214
ES.15569.2	chr17	-	3702	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	24	-357	24	357	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGACTACTTTTGCCT	2987	False	NA	NA	False	AAAAAG	-16	NA	65920526	65884964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.20	chr17	-	3000	5	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	-11	355	intron_retention	FALSE	canonical	3	3309	junction_3	80.7496130021686	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2952	False	NA	-17	True	AATAAA	-14	NA	65920561	65887059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65902050_65920214
ES.15569.22	chr17	-	977	3	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	25	355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1754.5	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2988	False	NA	-17	True	AATAAA	-14	NA	65920525	65887059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887655_65901978_65902050_65920214
ES.15569.23	chr17	-	1498	5	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	29	355	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1510.38113981207	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2992	False	NA	-17	True	AATAAA	-14	NA	65920521	65887059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65889574_65889749_65899285_65899367_65901896_65902050_65920214
ES.15569.24	chr17	-	1268	3	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	23	353	combination_of_known_splicesites	FALSE	canonical	1	36	junction_2	1707	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGCTCGATAGCTTGT	2986	False	NA	-19	True	AATAAA	-12	NA	65920527	65887061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65887843_65889574_65889749_65920214
ES.15569.25	chr17	-	1689	7	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	50	325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1631.8054843911	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACATAAAAAAAATAAAACT	3013	False	NA	-47	True	NA	NA	NA	65920500	65887089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889773_65894047_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.26	chr17	-	1534	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	4	1831	4	262	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGTGAGGCAGTTTG	2967	False	NA	-110	True	NA	NA	NA	65920546	65887152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.27	chr17	-	1335	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-11	2045	-11	48	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGTTCAAGAATTGTT	2952	False	NA	NA	False	AATAAA	-26	NA	65920561	65887366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.28	chr17	-	1225	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-2	2146	-2	-53	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATTGTATATTATCAGA	2961	False	NA	NA	False	AATAAA	-22	NA	65920552	65887467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.3	chr17	-	2707	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	23	639	23	-639	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGACGCTTAGTTATTC	2986	False	NA	NA	False	AAAACA	-20	NA	65920527	65885960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.30	chr17	-	6417	1	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	267	-7867	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	65901698	65895281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_65895300_65901700
ES.15569.31	chr17	-	1519	2	ISM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	35	15510	35	-13417	5prime_fragment	FALSE	canonical	3	3509	junction_1	0	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTATCCTTTGTTTTC	2998	False	NA	NA	False	AATAAA	-13	NA	65920515	65900831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_65902050_65920214
ES.15569.4	chr17	-	2025	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	-378	1722	-378	371	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTGTCATGTCAT	2585	False	NA	-1	True	AATAAA	-30	NA	65920928	65887043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.5	chr17	-	983	3	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	31	366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1754.5	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2994	False	NA	-6	True	AATAAA	-25	NA	65920519	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887664_65901986_65902050_65920214
ES.15569.6	chr17	-	3280	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	13	366	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1399.70862682203	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2976	False	NA	-6	True	AATAAA	-25	NA	65920537	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65888211_65888291_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.7	chr17	-	6861	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	19	366	intron_retention	FALSE	canonical	3	116	junction_2	1348.10489206144	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2982	False	NA	-6	True	AATAAA	-25	NA	65920531	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889749_65894047_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.8	chr17	-	2128	7	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	-372	366	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	1604.61529657423	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	2591	False	NA	-6	True	AATAAA	-25	NA	65920922	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889574_65889749_65894047_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.15569.9	chr17	-	1620	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	47	366	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1399.30974412387	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTTGTGTCTGTCAT	3010	False	NA	-6	True	AATAAA	-25	NA	65920503	65887048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65887843_65889549_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ES.1557.1	chr1	-	916	1	Antisense	novelGene_ENSMUSG00000023150.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-21	NA	151231656	151230740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_151230700_151231700
ES.15570.1	chr17	-	156	1	Intergenic	novelGene_12967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	65929902	65929746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_65929700_65929900
ES.15571.1	chr17	-	168	1	Intergenic	novelGene_12968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAGAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	65939052	65938884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_65938900_65939100
ES.15572.1	chr17	+	3296	2	Antisense	novelGene_ENSMUSG00000056515.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCCCGTCACCCCGCA	9214	False	NA	NA	False	AATAGA	-36	NA	65963342	65966751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_65963845_65963957
ES.15573.1	chr17	+	181	1	Intergenic	novelGene_12971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAACAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66026364	66026545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66026400_66026500
ES.15574.1	chr17	+	176	1	Intergenic	novelGene_12972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATTTGAAAGC	NA	False	NA	NA	False	NA	NA	NA	66027958	66028134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66028000_66028100
ES.15575.1	chr17	+	262	1	Intergenic	novelGene_12974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATGAAGGCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	66069242	66069504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66069200_66069500
ES.15576.1	chr17	+	176	1	Intergenic	novelGene_12975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66085950	66086126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66086000_66086100
ES.15577.1	chr17	+	4079	21	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	-615	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.681199855465	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGGAGAAAGGCGTT	NA	False	NA	32	True	AATAAA	-29	NA	66088952	66148918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66088983_66089381_66089679_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.10	chr17	+	3831	21	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	211	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.901412421328	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66089985	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66119960_66120133_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.11	chr17	+	3770	20	NIC	ENSMUSG00000061950.18	novel	664	7	NA	NA	222	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	92.3045363122675	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGGAGAAAGGCGTT	NA	False	NA	32	True	AATAAA	-29	NA	66089996	66148918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090015_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.13	chr17	+	4179	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	-333	4	242	0	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGGGAGAAAGGCGT	NA	False	NA	31	True	AATAAA	-28	NA	66090016	66148917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.14	chr17	+	4233	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	249	-9	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	101.79502689228	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTTAGCATAAGATGGG	NA	False	NA	21	True	AATAAA	-18	NA	66090023	66148907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.15	chr17	+	4597	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	256	-15	intron_retention	FALSE	canonical	3	222	junction_1	41.4571026245768	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATCTATAAAGAGAGACAC	NA	False	NA	2	True	AATAAA	-12	NA	66090030	66148836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110205_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.16	chr17	+	3799	20	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	256	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	119.477973491286	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCACTTTGTTTCCTAA	NA	False	NA	21	True	AATAAA	-31	NA	66090030	66148855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090146_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136374_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.17	chr17	+	3485	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	-319	684	256	-614	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAACTCGTTCCTTCAT	NA	False	NA	NA	False	AGTAAA	-28	NA	66090030	66148237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.18	chr17	+	3862	20	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	262	-10	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	79.4921902468998	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACTTAGCATAAGATGG	NA	False	NA	20	True	AATAAA	-17	NA	66090036	66148906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090210_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.19	chr17	+	4047	19	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	266	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	85.8067200741093	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCACTTTGTTTCCTA	NA	False	NA	20	True	AATAAA	-30	NA	66090040	66148854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.2	chr17	+	3640	20	NIC	ENSMUSG00000061950.18	novel	664	7	NA	NA	-515	-620	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	80.5156855728665	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCCTTAACTCGTTC	NA	False	NA	NA	False	AGTAAA	-22	NA	66089052	66148231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66089679_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.20	chr17	+	3765	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-314	333	272	-267	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGCACATTGCTGTAC	NA	False	NA	NA	False	AATAGA	-18	NA	66090046	66148584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.21	chr17	+	4374	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	274	-3	intron_retention	FALSE	canonical	3	23	junction_11	112.873228229592	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACACCACCCACTTTGT	NA	False	NA	14	True	AATAAA	-24	NA	66090048	66148848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.22	chr17	+	4251	21	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-286	-2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	111.455495602505	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAAGATGGGAGAAAGG	NA	False	NA	28	True	AATAAA	-25	NA	66090063	66148914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.23	chr17	+	3168	11	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-243	15810	-232	-4915	5prime_fragment	FALSE	canonical	3	222	junction_1	47.3387790294596	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTTTAATTTAACT	NA	False	NA	NA	False	ATTAAA	-23	NA	66090117	66133107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254
ES.15577.24	chr17	+	3776	21	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-230	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	97.3901817433359	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAGACACCACCCA	NA	False	NA	8	True	AATAAA	-18	NA	66090119	66148842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66148032_66148256
ES.15577.25	chr17	+	5800	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-223	-13	intron_retention	FALSE	canonical	3	222	junction_1	41.3024077856109	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTATAAAGAGAGACACCA	NA	False	NA	4	True	AATAAA	-14	NA	66090126	66148838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.26	chr17	+	3763	20	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	-223	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	94.2816843882221	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGACACCACCCACTTT	NA	False	NA	12	True	AATAAA	-22	NA	66090126	66148846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090210_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.28	chr17	+	4091	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-217	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.3037578572878	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTATAAAGAGAGACACC	NA	False	NA	3	True	AATAAA	-13	NA	66090132	66148837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66111070_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.29	chr17	+	4020	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-210	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	98.0821635330507	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	NA	False	NA	7	True	AATAAA	-17	NA	66090139	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110814_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.3	chr17	+	3952	20	NIC	ENSMUSG00000061950.18	novel	664	7	NA	NA	-153	-11	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	80.5156855728665	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTACTTAGCATAAGATG	NA	False	NA	19	True	AATAAA	-16	NA	66089414	66148905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66089679_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.31	chr17	+	3865	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-137	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	86.8754959729959	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGACACCACCCACT	NA	False	NA	10	True	AATAAA	-20	NA	66090212	66148844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142971_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.32	chr17	+	3805	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-131	-10	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	84.9563613470665	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	NA	False	NA	7	True	AATAAA	-17	NA	66090218	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.33	chr17	+	3405	21	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-125	-620	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	114.386231688958	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCCTTAACTCGTTC	NA	False	NA	NA	False	AGTAAA	-22	NA	66090224	66148231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136865_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.35	chr17	+	5347	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-121	11368	intron_retention	FALSE	canonical	0	0	junction_20	84.6796758378302	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTTGGCTTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	66090228	66160289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66149201_66159141
ES.15577.36	chr17	+	3687	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-119	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.6796758378302	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAGATGGGAGAAAGGC	NA	False	NA	29	True	AATAAA	-26	NA	66090230	66148915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66148032_66148256
ES.15577.37	chr17	+	3184	18	NIC	ENSMUSG00000061950.18	novel	3254	19	NA	NA	-117	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	105.46102446715	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	NA	False	NA	7	True	AATAAA	-17	NA	66090232	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.38	chr17	+	3792	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-116	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.6210583878579	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGACACCACCCACT	NA	False	NA	10	True	AATAAA	-20	NA	66090233	66148844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121414_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.39	chr17	+	3221	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-125	688	-114	-622	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAAAGCCTTAACTCGT	NA	False	NA	NA	False	AGTAAA	-20	NA	66090235	66148229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.4	chr17	+	4074	20	NIC	ENSMUSG00000061950.18	novel	775	7	NA	NA	75	2	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	77.0463399789706	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGAGAAAGGCGTTT	NA	False	NA	33	True	AATAAA	-30	NA	66089642	66148919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.41	chr17	+	3689	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-101	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	99.0778814508959	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090248	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131442_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.42	chr17	+	3739	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-101	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	124.122604922035	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090248	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66120514_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.43	chr17	+	3736	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-90	-17	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	121.652979823759	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGATCTATAAAGAGAGAC	NA	False	NA	0	True	AATAAA	-10	NA	66090259	66148834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131442_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.44	chr17	+	4029	22	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-89	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	144.620842925965	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTATAAAGAGAGACACC	NA	False	NA	3	True	AATAAA	-13	NA	66090260	66148837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66104153_66104263_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138082_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.45	chr17	+	3916	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-83	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.4985379991962	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090266	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66111070_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.46	chr17	+	3968	21	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	104.817031058889	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAGAAAGGCGTTTGT	NA	False	NA	35	True	AATAAA	-32	NA	66090266	66148921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136899_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.47	chr17	+	4090	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-65	0	intron_retention	FALSE	canonical	3	23	junction_11	102.348218815653	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090284	66148851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.48	chr17	+	4059	19	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-38	1	intron_retention	FALSE	canonical	3	102	junction_1	64.6871149418968	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGGAGAAAGGCGTT	NA	False	NA	32	True	AATAAA	-29	NA	66090311	66148918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.49	chr17	+	3614	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	85.7793019478433	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAAGATGGGAGAAAGG	NA	False	NA	28	True	AATAAA	-25	NA	66090339	66148914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131442_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.5	chr17	+	4454	20	NIC	ENSMUSG00000061950.18	novel	775	7	NA	NA	-74	436	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	77.0463399789706	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGACTCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	66089700	66149357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.50	chr17	+	3791	19	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.8067200741093	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTAGCATAAGATGGGA	NA	False	NA	22	True	AATAAA	-19	NA	66090340	66148908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090486_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.51	chr17	+	3835	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	109.95403585135	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACCCACTTTGTTTCC	NA	False	NA	18	True	AATAAA	-28	NA	66090353	66148852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66104153_66104263_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.52	chr17	+	3550	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	14	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	88.7707548327728	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGACACCACCCACT	NA	False	NA	10	True	AATAAA	-20	NA	66090374	66148844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.54	chr17	+	4177	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	47	-440	-3	436	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGACTCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	66090407	66149357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.55	chr17	+	4161	20	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	37	junction_12	93.9671363545864	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090407	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.56	chr17	+	3593	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	86.8618159449368	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTATAAAGAGAGACACC	NA	False	NA	3	True	AATAAA	-13	NA	66090408	66148837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66144957_66145812_66145955_66147851
ES.15577.57	chr17	+	4262	19	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	48	1371	-2	-1305	5prime_fragment	FALSE	canonical	3	222	junction_1	43.1804997140556	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTGGGTGTGATTGGT	NA	False	NA	NA	False	AGTAAA	-22	NA	66090408	66147546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812
ES.15577.59	chr17	+	3646	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-2	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	99.9176392136983	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATAAAGAGAGACACCAC	NA	False	NA	5	True	AATAAA	-15	NA	66090408	66148839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66144957_66145812_66145955_66147851
ES.15577.6	chr17	+	4222	21	NNC	ENSMUSG00000061950.18	novel	775	7	NA	NA	-70	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.901412421328	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACTTAGCATAAGATGG	NA	False	NA	20	True	AATAAA	-17	NA	66089704	66148906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118438_66120071_66120242_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.60	chr17	+	3674	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	105.110703546309	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGACACCACCCACT	NA	False	NA	10	True	AATAAA	-20	NA	66090408	66148844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136468_66136899_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.61	chr17	+	3771	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.156399511475	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	NA	False	NA	7	True	AATAAA	-17	NA	66090409	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090469_66090531_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131253_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.62	chr17	+	3910	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	0	2	intron_retention	FALSE	canonical	3	294	junction_8	32.8404767562873	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGGAGAAAGGCGTTT	NA	False	NA	33	True	AATAAA	-30	NA	66090410	66148919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.63	chr17	+	3538	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.4985379991962	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATAAAGAGAGACACCAC	NA	False	NA	5	True	AATAAA	-15	NA	66090410	66148839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117650_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.64	chr17	+	4100	20	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	2	-9	intron_retention	FALSE	canonical	3	37	junction_12	79.580722620132	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAGACACCACCCA	NA	False	NA	8	True	AATAAA	-18	NA	66090412	66148842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.65	chr17	+	3546	21	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	118.487668134705	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAGAAAGGCGTTTGT	NA	False	NA	35	True	AATAAA	-32	NA	66090412	66148921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120552_66120689_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66148032_66148256
ES.15577.68	chr17	+	3632	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	7	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	99.6525820995802	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGATCTATAAAGAGAGA	NA	False	NA	-1	True	AATAAA	-9	NA	66090417	66148833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120514_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.69	chr17	+	3663	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	7	-12	intron_retention	FALSE	non_canonical	0	0	junction_19	83.6004546104884	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTACTTAGCATAAGAT	NA	False	NA	18	True	AATAAA	-15	NA	66090417	66148904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66148032_66148256
ES.15577.7	chr17	+	3684	21	NNC	ENSMUSG00000061950.18	novel	775	7	NA	NA	-42	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	103.893924268939	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGACACCACCCACT	NA	False	NA	10	True	AATAAA	-20	NA	66089732	66148844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851_66148032_66148256
ES.15577.71	chr17	+	4338	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	12	438	intron_retention	FALSE	canonical	3	294	junction_8	32.8404767562873	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGACTCAGTGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	66090422	66149359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.72	chr17	+	3207	19	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	13	-622	intron_retention	FALSE	canonical	3	294	junction_8	32.8404767562873	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAAAGCCTTAACTCGT	NA	False	NA	NA	False	AGTAAA	-20	NA	66090423	66148229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.74	chr17	+	3812	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	21	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.6004546104884	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACTTAGCATAAGATGG	NA	False	NA	20	True	AATAAA	-17	NA	66090431	66148906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090476_66090539_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.75	chr17	+	3558	18	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.966971479615	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAGAGACACCACCCA	NA	False	NA	8	True	AATAAA	-18	NA	66090432	66148842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090474_66090534_66090664_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.76	chr17	+	3937	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	24	-4	intron_retention	FALSE	canonical	0	0	junction_18	131.61075405041	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACACCACCCACTTTG	NA	False	NA	13	True	AATAAA	-23	NA	66090434	66148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66144970_66145812_66145955_66147851
ES.15577.77	chr17	+	3686	20	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-59	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	97.6513953502479	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTATAAAGAGAGACACCA	NA	False	NA	4	True	AATAAA	-14	NA	66090534	66148838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140020_66140089_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.78	chr17	+	3078	17	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	257	3313	24	-372	internal_fragment	FALSE	canonical	3	294	junction_8	33.7869589301849	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	66090617	66145604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884
ES.15577.8	chr17	+	3700	20	NNC	ENSMUSG00000061950.18	novel	775	7	NA	NA	25	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	115.888354908179	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATAAAGAGAGACACCAC	NA	False	NA	5	True	AATAAA	-15	NA	66089799	66148839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66090015_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131442_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.80	chr17	+	177	1	Intergenic	novelGene_12977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	465	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTCATACGTAT	NA	False	NA	NA	False	NA	NA	NA	66100814	66100991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66100800_66101000
ES.15577.81	chr17	+	4804	19	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-640	-13	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	105.1502892689	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTATAAAGAGAGACACCA	7393	False	NA	4	True	AATAAA	-14	NA	66109099	66148838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.82	chr17	+	3618	18	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	1113	-10	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	106.440847324882	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	9146	False	NA	7	True	AATAAA	-17	NA	66110852	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.83	chr17	+	3508	13	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	30320	-441	-3314	437	3prime_fragment	FALSE	canonical	3	294	junction_2	34.0272562318308	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGACTCAGTGTGTTG	9045	False	NA	NA	False	NA	NA	NA	66120680	66149358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15577.84	chr17	+	182	1	Genic_Genomic	ENSMUSG00000061950.18	novel	NA	NA	NA	NA	-178	-2076	mono-exon	FALSE	NA	NA	NA	NA	NA	506	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAACTGTAGTAATTT	NA	False	NA	NA	False	NA	NA	NA	66135764	66135946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_66135800_66135900
ES.15577.85	chr17	+	4337	7	NIC	ENSMUSG00000061950.18	novel	2753	12	NA	NA	438	-10	intron_retention	FALSE	canonical	3	326	junction_3	24.5995709086335	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGAGAGACACCACCC	NA	False	NA	7	True	AATAAA	-17	NA	66136380	66148841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145955_66147851
ES.15577.86	chr17	+	3084	1	NIC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	2491	1383	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAACTTTTGACACATGG	NA	False	NA	NA	False	NA	NA	NA	66138433	66141517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66138400_66141500
ES.15577.9	chr17	+	4190	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	-391	-15	195	11	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTTGTCTTTAGCTCAG	NA	False	NA	46	True	AATAAA	-43	NA	66089969	66148932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ES.15578.1	chr17	+	174	1	Intergenic	novelGene_12982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATACAAATACATT	NA	False	NA	NA	False	NA	NA	NA	66184527	66184701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66184500_66184700
ES.15579.1	chr17	+	1953	2	FSM	ENSMUSG00000117335.2	ENSMUST00000232741.2	624	2	-1332	3	-1332	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCCTGTGAAAAGGTCG	NA	False	NA	NA	False	NA	NA	NA	66191295	66194019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66192907_66193677
ES.1558.1	chr1	+	176	1	Antisense	novelGene_ENSMUSG00000052748.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTATGTTATGT	NA	False	NA	NA	False	NA	NA	NA	151293394	151293570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_151293400_151293600
ES.15580.1	chr17	-	3507	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	62	-96	-50	96	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCAGTAGCTAATTGTC	NA	False	NA	96	True	AATAAA	-34	NA	66079685	65958627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ES.15580.2	chr17	-	3464	8	NNC	ENSMUSG00000056515.10	novel	3473	7	NA	NA	-12026	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.1913919283667	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGTCCTTTCCTCAT	9780	False	NA	-1	True	AATAAA	-14	NA	66091773	65958724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66090998_66091115_66091650
ES.15580.3	chr17	-	1023	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	111	2339	-1	-2339	multi-exon	FALSE	canonical	3	62	junction_1	10.1775897605147	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGAGTGCTGTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	66079636	65961062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ES.15580.4	chr17	-	234	1	Intergenic	novelGene_12969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTCCATTGAATTACA	NA	False	NA	NA	False	NA	NA	NA	66003699	66003465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66003500_66003700
ES.15580.5	chr17	-	176	1	Intergenic	novelGene_12970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAGATAGGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	66023862	66023686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66023700_66023900
ES.15580.6	chr17	-	144	1	Intergenic	novelGene_12973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66032398	66032254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66032300_66032400
ES.15581.1	chr17	-	1481	1	Intergenic	novelGene_12976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	4592	False	NA	NA	False	NA	NA	NA	66097420	66095939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66095900_66097400
ES.15582.1	chr17	-	3168	2	Antisense	novelGene_ENSMUSG00000061950.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCATAATACAAGCA	1899	False	NA	NA	False	NA	NA	NA	66109621	66106184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_66108298_66108566
ES.15583.1	chr17	-	177	1	Intergenic	novelGene_12978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	66111996	66111819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66111800_66112000
ES.15584.1	chr17	-	3601	1	Antisense	novelGene_ENSMUSG00000061950.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACCTCAGATGTGTTTG	NA	False	NA	NA	False	AATAGA	-43	NA	66127629	66124028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_66124000_66127600
ES.15585.1	chr17	-	240	1	Intergenic	novelGene_12979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTGGGCACCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	66144620	66144380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66144400_66144600
ES.15586.1	chr17	-	5589	11	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	110	2316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	211.416082642736	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTATTTTTATGGGA	NA	False	NA	NA	False	ATTAAA	-20	NA	66191839	66153096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66154124_66154551_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.10	chr17	-	3752	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-112	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	219.76525073837	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66175158	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66174943
ES.15586.11	chr17	-	3609	10	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-339	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	244.760855823005	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192288	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164753_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.12	chr17	-	3105	8	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	3218	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.810924991924	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66171607	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159801_66161093_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268
ES.15586.13	chr17	-	3846	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-127	3	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191525	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
ES.15586.14	chr17	-	4947	9	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-361	3	intron_retention	FALSE	canonical	3	126	junction_8	163.315980158097	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192310	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.19	chr17	-	3839	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-47	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	219.260091339762	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191445	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191143
ES.15586.2	chr17	-	5978	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	485	-2664	-359	2316	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTATTTTTATGGGA	NA	False	NA	NA	False	ATTAAA	-20	NA	66192308	66153096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.21	chr17	-	3085	6	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	249.10511837375	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191958	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159811_66171258_66171728_66174526_66174826_66191672
ES.15586.23	chr17	-	3706	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-6517	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.76525073837	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	6659	False	NA	NA	False	AATAAA	-34	NA	66181563	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66181394
ES.15586.24	chr17	-	2858	8	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-361	3	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	253.174135442669	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192310	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66174526_66174826_66192180
ES.15586.25	chr17	-	3868	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-186	3	combination_of_known_junctions	FALSE	canonical	1	29	junction_4	219.927225179149	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192135	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.26	chr17	-	3405	8	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	169	3	combination_of_known_splicesites	FALSE	canonical	1	62	junction_3	199.703964581046	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191780	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.29	chr17	-	4887	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-1934	3	intron_retention	FALSE	non_canonical	0	0	junction_9	219.76525073837	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66176980	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66175417_66176221
ES.15586.3	chr17	-	6129	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	-2	-2316	-2	2316	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTATTTTTATGGGA	NA	False	NA	NA	False	ATTAAA	-20	NA	66191951	66153096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.32	chr17	-	3534	9	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-360	3	combination_of_known_junctions	FALSE	canonical	1	29	junction_4	246.389934859361	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192309	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.34	chr17	-	3615	11	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-339	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	283.062272300637	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192288	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164585_66164616_66164807_66164880_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.35	chr17	-	3848	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-62	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.439444629904	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191460	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157185_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191143
ES.15586.36	chr17	-	6492	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-10	3	intron_retention	FALSE	canonical	1	202	junction_3	148.749789915818	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191959	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66171728_66174526_66174826_66191672
ES.15586.37	chr17	-	2893	8	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	112	3	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	228.49989952215	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191837	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66174526_66174826_66191672
ES.15586.38	chr17	-	2928	6	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-360	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	283.209886833069	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192309	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159811_66171258_66171728_66174526_66174826_66192180
ES.15586.4	chr17	-	5681	11	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-82	2313	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.854029036517	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTTATTTTTATG	NA	False	NA	NA	False	ATTAAA	-17	NA	66191480	66153099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66154122_66154551_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
ES.15586.41	chr17	-	2512	1	Genic_Genomic	ENSMUSG00000024096.18	novel	NA	NA	NA	NA	8119	3	mono-exon	FALSE	NA	NA	NA	NA	NA	725	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66157921	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_66155400_66157900
ES.15586.45	chr17	-	2711	7	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	132	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	237.357676654172	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191817	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66174526_66174826_66191672
ES.15586.47	chr17	-	4036	7	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-360	3	intron_retention	FALSE	canonical	1	9	junction_5	258.393380118162	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192309	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66166130_66174526_66174826_66192180
ES.15586.48	chr17	-	3678	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	128	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.609642460727	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTCTATTGTCCACTC	NA	False	NA	NA	False	AATAAA	-32	NA	66191821	66155411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157185_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.49	chr17	-	3499	9	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-357	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	255.069108282442	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTCTATTGTCCACTC	NA	False	NA	NA	False	AATAAA	-32	NA	66192306	66155411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.5	chr17	-	7733	8	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	32	6	intron_retention	FALSE	canonical	3	383	junction_7	85.3912962156434	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATTGTCCACTCTTCTC	NA	False	NA	NA	False	AATAAA	-37	NA	66191917	66155406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66161195_66164656_66164789_66165967_66166130_66168250_66171728_66174526_66174826_66191672
ES.15586.51	chr17	-	6873	10	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-361	-13	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	242.971166302343	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66192310	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66164417_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.52	chr17	-	4164	7	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	105	-13	intron_retention	FALSE	canonical	3	9	junction_5	224.463619917943	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66191844	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66161195_66164656_66164789_66165967_66166130_66174526_66174826_66191672
ES.15586.54	chr17	-	8820	4	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-1754	-13	intron_retention	FALSE	canonical	3	596	junction_1	21.0765799460496	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66167794	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66164789_66165967
ES.15586.56	chr17	-	6564	9	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	173	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.029302456714	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66174652	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157185_66159114_66159239_66159684_66159807_66161086_66164417_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526
ES.15586.57	chr17	-	3489	10	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-361	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	244.11083295387	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66192310	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168439_66171268_66171728_66174526_66174826_66192180
ES.15586.58	chr17	-	2551	6	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	144	-13	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	240.84600889365	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66191805	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66174526_66174826_66191672
ES.15586.59	chr17	-	3620	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-107	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	249.609670594552	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66175153	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161087_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66175053
ES.15586.6	chr17	-	3919	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	-104	-4	-104	4	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTATTGTCCACTCTTC	NA	False	NA	NA	False	AATAAA	-35	NA	66192053	66155408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.60	chr17	-	2544	6	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-357	-13	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	258.31035596739	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66192306	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66174526_66174826_66192180
ES.15586.62	chr17	-	3410	8	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	94	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	238.203223131435	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	66191855	66155425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.63	chr17	-	3860	11	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-66	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	256.122255963827	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	AATAAA	-17	NA	66191464	66155426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66174961_66175054_66191216
ES.15586.69	chr17	-	6105	8	NIC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-358	-15	intron_retention	FALSE	canonical	3	126	junction_7	173.505866512593	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AATAAA	-16	NA	66192307	66155427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66161195_66164656_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.7	chr17	-	4893	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	100	3	intron_retention	FALSE	canonical	1	202	junction_3	149.285328733268	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66191849	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.70	chr17	-	3810	11	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	123	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	282.21376649625	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AATAAA	-16	NA	66191826	66155427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161087_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66183386_66183525_66191672
ES.15586.71	chr17	-	4976	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	100	-15	intron_retention	FALSE	canonical	3	383	junction_8	80.4332020996305	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AATAAA	-16	NA	66191849	66155427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.73	chr17	-	3599	10	NNC	ENSMUSG00000024096.18	novel	3799	10	NA	NA	-357	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.76525073837	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AATAAA	-16	NA	66192306	66155427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174780_66192180
ES.15586.75	chr17	-	3533	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	99	-17	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	229.538906015952	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	66191850	66155429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.77	chr17	-	3641	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	29	141	29	-141	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATTTCTATCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	66191920	66155553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.78	chr17	-	3522	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	484	-207	-360	-141	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATTTCTATCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	66192309	66155553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.79	chr17	-	3507	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	-5	309	-5	39	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGCATACTATTTTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	66191954	66155721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.8	chr17	-	3726	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	424	-351	-420	3	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTATTGTCCACTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	66192369	66155409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.80	chr17	-	2403	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	484	912	-360	152	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTTGGCTTTTTT	NA	False	NA	2	True	TTTAAA	-8	NA	66192309	66156672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.81	chr17	-	2421	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	9	126	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCTTCTTTTTAAAC	NA	False	NA	-24	True	NA	NA	NA	66191389	66156698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
ES.15586.82	chr17	-	2556	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	-33	1288	-33	124	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGGCTTCTTTTTAA	NA	False	NA	-26	True	NA	NA	NA	66191982	66156700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.83	chr17	-	2426	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-81	120	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	219.76525073837	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGAGTGGCTTCTTT	NA	False	NA	-30	True	NA	NA	NA	66175127	66156704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66174943
ES.15586.84	chr17	-	2716	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-70	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.76525073837	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGAGTGGCTTCTTT	NA	False	NA	-30	True	NA	NA	NA	66191468	66156704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66190994
ES.15586.85	chr17	-	2343	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-108	120	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_9	211.51470193772	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGAGTGGCTTCTTT	NA	False	NA	-30	True	NA	NA	NA	66175154	66156704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66175053
ES.15586.87	chr17	-	2812	9	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	140	2783	140	-1371	5prime_fragment	FALSE	canonical	1	202	junction_2	149.549114006068	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCCCAGGACTCTGCTA	NA	False	NA	NA	False	NA	NA	NA	66191809	66158195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ES.15586.88	chr17	-	2964	7	NNC	ENSMUSG00000024096.18	novel	443	3	NA	NA	-357	-6725	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	290.009195256518	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCTTAGTTGCTTAGT	NA	False	NA	NA	False	AATAAA	-17	NA	66192306	66163549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66164417_66164656_66165358_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ES.15586.89	chr17	-	212	1	Intergenic	novelGene_12980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	675	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGACACTGGTTC	NA	False	NA	NA	False	AAAAAG	-8	NA	66167255	66167043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66167000_66167300
ES.15586.90	chr17	-	2579	3	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	95	14217	95	2057	5prime_fragment	FALSE	canonical	3	383	junction_2	139.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTCTGACTAGAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	66191854	66169629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66171728_66174526_66174826_66191672
ES.15586.91	chr17	-	2497	3	NNC	ENSMUSG00000024096.18	novel	443	3	NA	NA	-107	2057	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_2	314.5	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTCTGACTAGAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	66175153	66169629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66171728_66174526_66174826_66175053
ES.15586.92	chr17	-	203	1	Intergenic	novelGene_12981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACGGCAACAA	NA	False	NA	NA	False	NA	NA	NA	66177264	66177061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66177100_66177300
ES.15587.1	chr17	-	264	1	Antisense	novelGene_ENSMUSG00000117250.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACAACCTTAAATTT	NA	False	NA	93	True	NA	NA	NA	66196187	66195923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_66195900_66196200
ES.15587.2	chr17	-	153	1	Intergenic	novelGene_12983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTGTCCTTTTCT	NA	False	NA	-18	True	NA	NA	NA	66196187	66196034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66196000_66196200
ES.15588.1	chr17	+	178	1	Intergenic	novelGene_12984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTACTTGG	NA	False	NA	NA	False	NA	NA	NA	66197586	66197764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66197600_66197800
ES.15589.1	chr17	+	169	1	Intergenic	novelGene_12985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGACTCACT	NA	False	NA	NA	False	NA	NA	NA	66205187	66205356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66205200_66205400
ES.1559.1	chr1	+	182	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATCAAACTATCAAT	NA	False	NA	NA	False	NA	NA	NA	151301183	151301365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151301200_151301400
ES.15590.1	chr17	+	4789	1	Antisense	novelGene_ENSMUSG00000024098.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAACCAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	66230779	66235568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66230800_66235600
ES.15591.1	chr17	-	4083	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	3	0	3	0	multi-exon	FALSE	canonical	3	222	junction_1	25.0636689253589	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8697	False	NA	1	True	AATAAA	-19	NA	66258218	66230059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.11	chr17	-	3937	6	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	44	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	105.899952785636	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAGTCATGTTTTTTA	8738	False	NA	-6	True	AATAAA	-12	NA	66258177	66230066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66233154_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.12	chr17	-	3912	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	15	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGAGTCATGTTTTT	8709	False	NA	-8	True	AATAAA	-10	NA	66258206	66230068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66230604_66230753_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.13	chr17	-	3913	4	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	9145	-9	intron_retention	FALSE	canonical	0	0	junction_3	115.534506629934	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGAGTCATGTTTTT	NA	False	NA	-8	True	AATAAA	-10	NA	66248965	66230068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66233462_66236541_66236809_66244795_66244896_66248812
ES.15591.14	chr17	-	3634	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-33	-24	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATAGAAATGACT	8750	False	NA	-23	True	NA	NA	NA	66258165	66230083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66230920_66231291_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.15	chr17	-	3267	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-36	-825	intron_retention	FALSE	non_canonical	0	0	junction_2	130.617916075858	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCAGCGTTTTGCGTAG	8747	False	NA	NA	False	NA	NA	NA	66258168	66230884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66233462_66236541_66236809_66244534_66244594_66244795_66244896_66255652_66255810_66258061
ES.15591.16	chr17	-	178	1	Intergenic	novelGene_12986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	66252129	66251951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66252000_66252100
ES.15591.2	chr17	-	3973	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-26	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATGTTTTTTATTAAT	8757	False	NA	-1	True	AATAAA	-17	NA	66258158	66230061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66232854_66232901_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.5	chr17	-	4085	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-32	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	130.617916075858	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCATGTTTTTTATTAA	8751	False	NA	-2	True	AATAAA	-16	NA	66258164	66230062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66233462_66236541_66236809_66244534_66244594_66244795_66244896_66255652_66255810_66258061
ES.15591.6	chr17	-	3436	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	-30	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCATGTTTTTTATT	8753	False	NA	-4	True	AATAAA	-14	NA	66258162	66230064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66230451_66231036_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.7	chr17	-	3964	6	NNC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	33	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	107.46422660588	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCATGTTTTTTATT	8727	False	NA	-4	True	AATAAA	-14	NA	66258188	66230064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66232300_66232383_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ES.15591.8	chr17	-	3940	4	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	40	-6	intron_retention	FALSE	canonical	2	11	junction_2	115.274551494344	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGTCATGTTTTTTAT	8734	False	NA	-5	True	AATAAA	-13	NA	66258181	66230065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66233462_66236541_66236809_66255652_66255810_66258061
ES.15592.1	chr17	+	180	1	Intergenic	novelGene_12987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCTCTCAATTAAT	NA	False	NA	5	True	NA	NA	NA	66267525	66267705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66267500_66267700
ES.15593.1	chr17	+	182	1	Intergenic	novelGene_12989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGTTAACTATAAT	NA	False	NA	NA	False	NA	NA	NA	66352398	66352580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66352400_66352600
ES.15594.1	chr17	-	8547	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.3396027547418	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAATCTGCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	66384033	66272699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66275170_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.10	chr17	-	7408	13	FSM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	16	3397	13	-1015	multi-exon	FALSE	canonical	2	19	junction_10	19.1325783823184	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTGTAAACTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	66384052	66276089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.11	chr17	-	7592	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	163	-1017	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	18.5561466504336	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCATTGTAAACTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	66383814	66276091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383385
ES.15594.12	chr17	-	6259	10	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	4	108	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	21.2869866930276	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGCCAGGCCTCTGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	66384030	66282734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.13	chr17	-	6341	11	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	17	10050	-12	100	5prime_fragment	FALSE	canonical	2	19	junction_8	20.8844439715306	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTGGAGGAGCCAGGC	NA	False	NA	NA	False	AATAAA	-16	NA	66384051	66282742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.14	chr17	-	7392	8	FSM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-53	-5826	-2	-5371	multi-exon	FALSE	canonical	3	23	junction_1	22.2481368171974	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCATTGTATAGTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	66384070	66288213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.15	chr17	-	2567	8	FSM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-34	-1020	-12	997	multi-exon	FALSE	canonical	3	23	junction_1	22.2481368171974	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGGAAAAGTCTGATCG	NA	False	NA	NA	False	AAGAAA	-12	NA	66384051	66293019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.16	chr17	-	4051	8	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	-12	2279	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.1331149957134	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTGTATTTCTGAAGA	NA	False	NA	NA	False	TATAAA	-2	NA	66384096	66327604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66330513_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.17	chr17	-	3130	8	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	-5	2279	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	25.3361079755147	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTGTATTTCTGAAGA	NA	False	NA	NA	False	TATAAA	-2	NA	66384073	66327604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66329615_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.18	chr17	-	3184	9	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	7	2279	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	24.5611481816303	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTGTATTTCTGAAGA	NA	False	NA	NA	False	TATAAA	-2	NA	66384058	66327604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66329615_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.19	chr17	-	4082	9	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	7	2279	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	24.3897391334963	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTGTATTTCTGAAGA	NA	False	NA	NA	False	TATAAA	-2	NA	66384058	66327604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66330513_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.2	chr17	-	8941	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	-12	521	intron_retention	FALSE	canonical	3	23	junction_5	19.3732370565579	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAAGTGTGCTCCGTG	NA	False	NA	NA	False	AATAAA	-27	NA	66384051	66274486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.20	chr17	-	4470	7	ISM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	48	33577	8	2267	5prime_fragment	FALSE	canonical	3	24	junction_4	22.2011010737956	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATATAAAAGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	66383969	66327616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.21	chr17	-	4588	8	FSM	ENSMUSG00000034647.16	ENSMUST00000143516.8	2342	8	15	-2261	-7	2261	multi-exon	FALSE	canonical	2	19	junction_5	22.376189969497	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCGAATATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	66384024	66327622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.22	chr17	-	2116	8	NNC	ENSMUSG00000034647.16	novel	2342	8	NA	NA	-1	405	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.1331149957134	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACGTAGTGATGTCTAAG	NA	False	NA	NA	False	AATGAA	-19	NA	66384035	66329478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66330513_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.23	chr17	-	1602	7	ISM	ENSMUSG00000034647.16	ENSMUST00000150766.2	1513	8	-17	36510	0	-666	5prime_fragment	FALSE	canonical	3	24	junction_4	22.2011010737956	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTTACATTTTTCATT	NA	False	NA	NA	False	TATAAA	-18	NA	66384034	66330549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.24	chr17	-	1369	5	FSM	ENSMUSG00000034647.16	ENSMUST00000129756.8	1403	5	36	-2	-9	2	multi-exon	FALSE	canonical	2	19	junction_2	27.5170401751351	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTGTCTGTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	66384048	66343790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.25	chr17	-	1308	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	-27	-338	4	-3	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATCTGTGTGTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	66384061	66343795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.26	chr17	-	1036	5	FSM	ENSMUSG00000034647.16	ENSMUST00000129756.8	1403	5	27	340	8	1	multi-exon	FALSE	canonical	2	19	junction_2	27.5170401751351	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTTTTAGGAAATTAT	NA	False	NA	NA	False	AATAAA	-31	NA	66384057	66344132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.27	chr17	-	2984	2	NNC	ENSMUSG00000034647.16	novel	943	4	NA	NA	36148	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAACATTTTTTAG	2359	False	NA	NA	False	AATAAA	-23	NA	66347311	66344140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66346294_66346480
ES.15594.28	chr17	-	1370	1	Intergenic	novelGene_12988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTGTTATCAAATGG	1999	False	NA	NA	False	NA	NA	NA	66347671	66346301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66346300_66347700
ES.15594.3	chr17	-	6833	13	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	0	519	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.7287571869375	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGAAAGTGTGCTCCG	NA	False	NA	NA	False	AATAAA	-25	NA	66384039	66274488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66275170_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.4	chr17	-	6797	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	-5	518	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.3396027547418	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTGAAAGTGTGCTCC	NA	False	NA	NA	False	AATAAA	-24	NA	66384073	66274489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66275170_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.5	chr17	-	4434	13	NNC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	7	516	intron_retention	FALSE	canonical	0	0	junction_4	21.5264694942968	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAGAGTGAAAGTGTGCT	NA	False	NA	NA	False	AATAAA	-22	NA	66383970	66274491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66294320_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ES.15594.6	chr17	-	6949	13	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	0	516	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	20.8731286586367	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAGAGTGAAAGTGTGCT	NA	False	NA	NA	False	AATAAA	-22	NA	66384039	66274491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66275170_66277144_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15594.7	chr17	-	7699	5	NIC	ENSMUSG00000034647.16	novel	474	4	NA	NA	-3144	512	intron_retention	FALSE	canonical	3	4	junction_1	12.8354976529934	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGTAAGAGTGAAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	66293093	66274495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66275170_66277144_66277333_66279291_66279388_66283015_66283160_66286496
ES.15594.8	chr17	-	7586	13	NNC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	-12	-916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.702474463884	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGGTCGTCAGAAGAA	NA	False	NA	NA	False	AATAAA	-25	NA	66384051	66275990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66380846_66380996_66383878
ES.15594.9	chr17	-	7349	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	6	-1012	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	19.3732370565579	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTAAACTTTTTTACA	NA	False	NA	NA	False	AATAAA	-20	NA	66384059	66276086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
ES.15595.1	chr17	+	5134	2	Antisense	novelGene_ENSMUSG00000024099.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66384145	66389762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66389128_66389610
ES.15595.2	chr17	+	5275	1	Antisense	novelGene_ENSMUSG00000024099.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66384488	66389763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66384500_66389800
ES.15596.1	chr17	+	4268	11	NNC	ENSMUSG00000024101.16	novel	901	5	NA	NA	-7128	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.6089709629216	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGAGCTGTCCTTTTTC	NA	False	NA	26	True	AATAAA	-34	NA	66411411	66426444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66413932_66420857_66421012_66422665_66422780_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.10	chr17	+	2913	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-26	-1056	-26	0	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	3	True	NA	NA	NA	66418613	66427498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.11	chr17	+	2149	11	NNC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	-3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5182236442885	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCGGCTTCTGAGAGTG	NA	False	NA	10	True	AATAAA	-18	NA	66418636	66426428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66419056_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.12	chr17	+	1839	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	-3	-5	-3	5	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTGTCCTTTTTCCCA	NA	False	NA	29	True	AATAAA	-37	NA	66418636	66426447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.13	chr17	+	1998	11	NIC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.5182236442885	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418642	66426442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66418897_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.14	chr17	+	2113	9	NIC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_1	42.1240726900902	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGGGAGCTGTCCTTT	NA	False	NA	23	True	AATAAA	-31	NA	66418644	66426441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66418727_66420857_66421012_66422665_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
ES.15596.15	chr17	+	1840	11	NNC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.6089709629216	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418647	66426442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66418727_66420857_66421012_66422665_66422778_66422931_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.16	chr17	+	1843	12	NNC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	0	-62	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.3945157058775	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCCAAGCCAACAGTGG	NA	False	NA	7	True	AATAAA	-18	NA	66418647	66426380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66418727_66420715_66420792_66420851_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.17	chr17	+	1972	10	NIC	ENSMUSG00000024101.16	novel	1831	11	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_1	39.8100427803443	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418669	66426442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66418727_66420857_66421012_66422665_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.3	chr17	+	2793	1	Intergenic	novelGene_12994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCATCTCCAAAGCAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	66411413	66414206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66411400_66414200
ES.15596.4	chr17	+	3879	12	NNC	ENSMUSG00000024101.16	novel	901	5	NA	NA	-7105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.2091169406914	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66411434	66426442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66413357_66413718_66413932_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.5	chr17	+	1847	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	4	1054	4	2	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGAGCTGTCCTTTTTC	NA	False	NA	26	True	AATAAA	-34	NA	66418543	66426444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.6	chr17	+	2008	10	NIC	ENSMUSG00000024101.16	novel	2905	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	38	junction_1	28.6709729754333	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGGGAGCTGTCCTT	NA	False	NA	22	True	AATAAA	-30	NA	66418549	66426440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66418645_66420857_66421012_66422665_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.7	chr17	+	2892	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	15	-2	7	2	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	5	True	NA	NA	NA	66418554	66427500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.8	chr17	+	1899	12	NNC	ENSMUSG00000024101.16	novel	2905	11	NA	NA	11	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.2091169406914	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGGCTTCTGAGAGTGG	NA	False	NA	11	True	AATAAA	-19	NA	66418558	66426429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66418645_66420715_66420792_66420851_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15596.9	chr17	+	4703	9	NIC	ENSMUSG00000024101.16	novel	2905	11	NA	NA	21	2	intron_retention	FALSE	canonical	3	38	junction_1	28.1688546980526	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	5	True	NA	NA	NA	66418568	66427500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66418645_66420857_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ES.15597.1	chr17	-	1628	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	68	1	4	-1	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGAGGTAATAGTGC	5520	False	NA	NA	False	AATAAA	-17	NA	66408486	66385633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.11	chr17	-	902	9	NIC	ENSMUSG00000024099.16	novel	927	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	1793.37938244394	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5513	False	NA	-11	True	AATAAA	-15	NA	66408493	66386435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66399652_66399722_66408409
ES.15597.12	chr17	-	906	9	FSM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	21	0	21	0	multi-exon	FALSE	canonical	1	6	junction_8	1803.30633403618	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5537	False	NA	-11	True	AATAAA	-15	NA	66408469	66386435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66407972_66408070_66408409
ES.15597.13	chr17	-	841	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1466.05967804583	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5523	False	NA	-11	True	AATAAA	-15	NA	66408483	66386435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396362_66396425_66396489_66398858_66398925_66408409
ES.15597.16	chr17	-	810	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1458.2637145676	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATAAGCTTTATTCGGT	5516	False	NA	-13	True	AATAAA	-13	NA	66408490	66386437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396471_66398858_66398925_66408409
ES.15597.19	chr17	-	2710	5	ISM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	6	6609	6	2156	5prime_fragment	FALSE	canonical	3	4079	junction_1	122.195284278895	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGCTGACTCATGCT	5458	False	NA	NA	False	ATTAAA	-11	NA	66408548	66392241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.2	chr17	-	1372	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	43	282	-7	-282	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTTAAAATAA	5495	False	NA	NA	False	NA	NA	NA	66408511	66385914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.20	chr17	-	1941	5	ISM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	56	7328	6	1437	5prime_fragment	FALSE	canonical	3	4079	junction_1	122.195284278895	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCGCCATTGTTGC	5508	False	NA	NA	False	AATAAA	-29	NA	66408498	66392960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.21	chr17	-	1900	2	Intergenic	novelGene_12990	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACCCATTTTAAAACAAA	8326	False	NA	NA	False	NA	NA	NA	66405680	66403390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66405087_66405476
ES.15597.22	chr17	-	4834	2	Genic_Genomic	ENSMUSG00000024099.16	novel	1697	8	NA	NA	-3	-8920	multi-exon	FALSE	non_canonical	0	0	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5513	False	NA	NA	False	NA	NA	NA	66408493	66403408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_66405090_66405340
ES.15597.23	chr17	-	310	1	Intergenic	novelGene_12991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGGTGGTGGCATG	8837	False	NA	NA	False	AATAAA	-1	NA	66410861	66410551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66410600_66410900
ES.15597.24	chr17	-	181	1	Intergenic	novelGene_12992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGCTCACA	8835	False	NA	NA	False	NA	NA	NA	66410863	66410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66410700_66410900
ES.15597.25	chr17	-	142	1	Intergenic	novelGene_12993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAAGGAGGAG	8548	False	NA	NA	False	NA	NA	NA	66411150	66411008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66411000_66411200
ES.15597.3	chr17	-	1141	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	-27	583	-27	220	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACATTTTTCCTTTGT	5425	False	NA	NA	False	AGTAAA	-16	NA	66408581	66386215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.4	chr17	-	1000	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	-96	793	-96	10	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCGGTTTGCTTATTCCC	5356	False	NA	-1	True	AATAAA	-25	NA	66408650	66386425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ES.15597.5	chr17	-	1068	8	NNC	ENSMUSG00000024099.16	novel	1697	8	NA	NA	-5477	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1462.53936280536	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTATTCGGTTTGCTT	5667	False	NA	-7	True	AATAAA	-19	NA	66414031	66386431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66413716
ES.15597.8	chr17	-	932	8	NNC	ENSMUSG00000024099.16	novel	1697	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1462.53936280536	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCTTTATTCGGTTTGC	5517	False	NA	-9	True	AATAAA	-17	NA	66408489	66386433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408308
ES.15598.1	chr17	+	3581	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-108	668	-15	117	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTCCAGCTCCTTTAT	NA	False	NA	59	True	NA	NA	NA	66430499	66458501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.13	chr17	+	3556	28	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	1	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.2744840784795	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430551	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437457_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.14	chr17	+	4380	25	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	1	67	intron_retention	FALSE	canonical	3	152	junction_9	16.6140314694136	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTTTTCATTTTT	NA	False	NA	9	True	NA	NA	NA	66430551	66458451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.15	chr17	+	4271	28	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.2744840784795	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	False	NA	21	True	ATTAAA	-16	NA	66430554	66459162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437457_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.16	chr17	+	5799	21	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	4	-4	intron_retention	FALSE	canonical	3	152	junction_7	16.1011645541557	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCCATGGCTGTTCA	NA	False	NA	-62	True	CATAAA	-14	NA	66430554	66458380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66441188_66442816_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.17	chr17	+	4582	24	NNC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	4	64	intron_retention	FALSE	canonical	2	2	junction_10	39.1880734914305	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430554	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66445907_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.2	chr17	+	3640	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-11	67	intron_retention	FALSE	canonical	3	152	junction_9	16.3988292265027	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTTTTCATTTTT	NA	False	NA	9	True	NA	NA	NA	66430503	66458451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.20	chr17	+	4931	22	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	-2	60	intron_retention	FALSE	canonical	3	152	junction_9	16.004676187413	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430563	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457405_66457568_66457724_66457797
ES.15598.21	chr17	+	4286	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-2	64	intron_retention	FALSE	canonical	3	130	junction_21	18.4043473125237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430563	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.22	chr17	+	5246	23	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	-2	64	intron_retention	FALSE	canonical	3	152	junction_9	16.0850014835956	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430563	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.23	chr17	+	8303	22	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_13	42.0964231679773	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCATGATCAAGTATGA	NA	False	NA	26	True	ATTAAA	-21	NA	66430564	66459167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437830_66440211_66441188_66442816_66442905_66443283_66446070_66446392_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454587_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.24	chr17	+	5425	23	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	-1	-71	intron_retention	FALSE	canonical	3	152	junction_9	16.0850014835956	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGAGGACTTCTTTTT	NA	False	NA	NA	False	AATACA	-35	NA	66430564	66458628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.25	chr17	+	4247	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-1	60	intron_retention	FALSE	canonical	3	130	junction_21	18.6193877450361	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430564	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.26	chr17	+	4906	10	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	-1	1677	intron_retention	FALSE	canonical	3	152	junction_8	13.6146253966592	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTAGTTCTTGGTTAC	NA	False	NA	NA	False	NA	NA	NA	66430564	66448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66443490_66445081_66446070_66446392
ES.15598.27	chr17	+	3390	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-1	64	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.7812334053977	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430564	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433240_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.29	chr17	+	4321	25	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	60	intron_retention	FALSE	canonical	1	1	junction_12	38.7308868633578	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430565	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447383_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.3	chr17	+	3469	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-5	60	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	38.3605213728906	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430509	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.30	chr17	+	3633	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-42	550	0	-80	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAGCCATAGAAGAGGA	NA	False	NA	NA	False	AATACA	-26	NA	66430565	66458619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.31	chr17	+	3276	25	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	64	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	39.2311304606714	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.32	chr17	+	4114	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	38.0863019995378	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430565	66459169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.34	chr17	+	4651	23	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	60	intron_retention	FALSE	canonical	3	152	junction_9	15.9695604042232	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430565	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.35	chr17	+	3718	25	NNC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_21	38.8025629164993	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTGTTCAGGACTC	NA	False	NA	-56	True	CATAAA	-20	NA	66430565	66458386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456315_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.36	chr17	+	3636	25	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	60	intron_retention	TRUE	canonical	1	2	junction_12	50.7395138318144	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430565	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445085_66445235_66446022_66446070_66446392_66446473_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.37	chr17	+	4630	24	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	60	intron_retention	FALSE	canonical	3	152	junction_9	15.8778417964603	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430565	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.38	chr17	+	4103	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.7812334053977	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	False	NA	21	True	ATTAAA	-16	NA	66430565	66459162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433240_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.39	chr17	+	3837	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	60	intron_retention	FALSE	canonical	3	130	junction_21	18.6494396698668	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430565	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.4	chr17	+	4233	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-87	-5	6	5	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAGTATGAGAATCCT	NA	False	NA	33	True	ATTAAA	-28	NA	66430520	66459174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.40	chr17	+	3878	23	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	53.4922756453585	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAACTTCATGATCAA	NA	False	NA	20	True	ATTAAA	-15	NA	66430565	66459161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.41	chr17	+	3275	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-42	908	0	-123	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGAATTTTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	66430565	66458261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.42	chr17	+	4456	24	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	64	intron_retention	FALSE	canonical	3	152	junction_9	15.9206444189472	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.43	chr17	+	4374	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	-1	intron_retention	FALSE	canonical	3	130	junction_21	18.5558616075891	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAACTTCATGATCAA	NA	False	NA	20	True	ATTAAA	-15	NA	66430565	66459161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.44	chr17	+	3378	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	37.7094937271738	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451256_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.45	chr17	+	5100	25	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	64	intron_retention	FALSE	canonical	0	0	junction_6	38.877992024909	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66440342_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.46	chr17	+	4204	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.5676126604063	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATGAACTTCATGATCA	NA	False	NA	19	True	ATTAAA	-14	NA	66430565	66459160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433165_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456179_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.47	chr17	+	3605	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	49.320726106462	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430565	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66445907_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456179_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.48	chr17	+	4473	26	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_18	50.2613330503679	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	False	NA	21	True	ATTAAA	-16	NA	66430571	66459162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66445907_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454587_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.5	chr17	+	3422	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	-66	785	-9	0	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGGCTGTTCAGGAC	NA	False	NA	-58	True	CATAAA	-18	NA	66430541	66458384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.50	chr17	+	3045	22	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	2	60	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	41.8254118851815	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430585	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.51	chr17	+	5152	24	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	2	2	intron_retention	FALSE	canonical	3	152	junction_9	15.9206444189472	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTTCATGATCAAGTA	NA	False	NA	23	True	ATTAAA	-18	NA	66430585	66459164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.52	chr17	+	3286	25	NIC	ENSMUSG00000035842.11	novel	4149	27	NA	NA	2	64	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	51.1361031138145	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430585	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.53	chr17	+	7725	24	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	2590	intron_retention	FALSE	canonical	3	152	junction_9	15.9206444189472	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTCCATTAAATGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	66430607	66461759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.54	chr17	+	3333	26	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	38.7040876394212	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430607	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447383_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.55	chr17	+	4298	26	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	60	intron_retention	FALSE	canonical	0	0	junction_14	38.9104407582335	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430607	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450316_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.56	chr17	+	4171	25	FSM	ENSMUSG00000035842.11	ENSMUST00000225687.2	4480	25	58	251	16	64	multi-exon	FALSE	canonical	3	152	junction_9	16.1136911248375	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430623	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.57	chr17	+	4033	26	NNC	ENSMUSG00000035842.11	novel	4149	27	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.5164899750743	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTACATGAACTTCATGA	NA	False	NA	16	True	ATTAAA	-11	NA	66430624	66459157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437103_66437671_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.58	chr17	+	3426	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	143	64	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCCGTGTTTTTCATT	NA	False	NA	6	True	NA	NA	NA	66430750	66458448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.59	chr17	+	4137	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	150	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCATGATCAAGTATG	NA	False	NA	25	True	ATTAAA	-20	NA	66430757	66459166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.6	chr17	+	4385	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-9	60	intron_retention	FALSE	canonical	0	0	junction_22	57.6016338731122	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430541	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456179_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.60	chr17	+	3333	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	174	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.1195759552217	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCCATGGCTGTTCA	NA	False	NA	-62	True	CATAAA	-14	NA	66430781	66458380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430843_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.61	chr17	+	3472	28	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	184	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	63.2274184763851	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430791	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456313_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.62	chr17	+	4217	26	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	188	2	intron_retention	FALSE	canonical	3	9	junction_1	36.5056488779476	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGATCAAGTATGAGAAT	NA	False	NA	30	True	ATTAAA	-25	NA	66430795	66459171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.63	chr17	+	4337	24	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	194	60	intron_retention	FALSE	canonical	3	9	junction_1	37.8787739015842	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66430801	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.64	chr17	+	4352	25	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	2672	3	intron_retention	FALSE	canonical	0	0	junction_20	38.8216854849051	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTCATGATCAAGTAT	NA	False	NA	24	True	ATTAAA	-19	NA	66433279	66459165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456179_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.65	chr17	+	3289	27	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	2682	55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.6691876750539	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCAAAAGTGTCTCCGTG	NA	False	NA	-3	True	NA	NA	NA	66433289	66458439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66440430_66440518_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446063_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.66	chr17	+	3918	25	ISM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	6243	-4	6243	4	3prime_fragment	FALSE	canonical	3	130	junction_20	18.7170080111349	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAGTATGAGAATCC	NA	False	NA	32	True	ATTAAA	-27	NA	66436850	66459173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.68	chr17	+	5529	18	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	7091	-1	intron_retention	FALSE	canonical	3	152	junction_5	16.2109792347922	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAACTTCATGATCAA	NA	False	NA	20	True	ATTAAA	-15	NA	66437698	66459161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.69	chr17	+	3914	17	NIC	ENSMUSG00000035842.11	novel	4149	27	NA	NA	-2567	60	intron_retention	FALSE	canonical	3	130	junction_12	20.2182428452623	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66442840	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450542_66450644_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.7	chr17	+	5184	25	NNC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-6	4	intron_retention	FALSE	canonical	0	0	junction_17	38.9417076824094	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAGTATGAGAATCC	NA	False	NA	32	True	ATTAAA	-27	NA	66430544	66459173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454587_66454736_66454986_66455091_66455648_66455799_66456025_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.70	chr17	+	254	1	Intergenic	novelGene_12995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	66448034	66448288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66448000_66448300
ES.15598.71	chr17	+	4438	6	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	1976	58	intron_retention	FALSE	canonical	3	165	junction_1	15.509996776273	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGTGTCTCCGTGTTT	NA	False	NA	0	True	NA	NA	NA	66452679	66458442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.72	chr17	+	6301	9	ISM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	24101	-4159	4005	4159	3prime_fragment	FALSE	canonical	3	130	junction_4	24.0074858117213	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGCCTTCCCTTCCTGG	NA	False	NA	NA	False	AGTAAA	-29	NA	66454708	66463328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.73	chr17	+	2078	8	NNC	ENSMUSG00000035842.11	novel	4149	27	NA	NA	4008	60	intron_retention	FALSE	canonical	0	0	junction_7	63.0775357017384	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTCTCCGTGTTTTT	NA	False	NA	2	True	NA	NA	NA	66454711	66458444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66457048_66457325_66457405_66457568_66457734_66457797
ES.15598.74	chr17	+	2475	7	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	4008	3	intron_retention	FALSE	canonical	3	154	junction_3	18.7053171287976	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTCATGATCAAGTAT	NA	False	NA	24	True	ATTAAA	-19	NA	66454711	66459165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66454736_66454986_66455091_66455648_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15598.75	chr17	+	3565	3	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	4205	-18	intron_retention	FALSE	canonical	0	0	junction_2	96.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAACAACTGAACCTAC	NA	False	NA	3	True	NA	NA	NA	66454908	66459144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66457048_66457325_66457405_66457797
ES.15598.8	chr17	+	4986	26	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	-6	1	intron_retention	FALSE	canonical	3	130	junction_21	18.6193877450361	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAACTTCATGATCAAGT	NA	False	NA	22	True	ATTAAA	-17	NA	66430544	66459163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ES.15599.1	chr17	-	5536	1	Antisense	novelGene_ENSMUSG00000035842.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATCCACGGCCCAGTC	2883	False	NA	NA	False	NA	NA	NA	66446897	66441361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_66441400_66446900
ES.156.1	chr1	+	6319	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTGCCAAATATGGGT	NA	False	NA	NA	False	NA	NA	NA	17124774	17131093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_17124800_17131100
ES.1560.1	chr1	-	2860	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	66	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304121	151243448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.11	chr1	-	2725	17	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	106	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	59.0470879362395	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304081	151243449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.12	chr1	-	2950	19	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	66.2801759834346	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304113	151243449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151280154_151280254_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.14	chr1	-	3452	19	FSM	ENSMUSG00000052748.15	ENSMUST00000111883.9	2855	19	66	-663	66	-2	multi-exon	FALSE	canonical	2	11	junction_5	41.9801540413245	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTGCTTTTCCGTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	151304121	151243451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.15	chr1	-	4681	6	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	-8121	-2	intron_retention	FALSE	canonical	3	152	junction_5	20.283983829613	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTGCTTTTCCGTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	151268388	151243451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186
ES.1560.16	chr1	-	3711	21	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	55.1112284384952	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTGCTTTTCCGTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	151304128	151243451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151298287_151298391_151299257_151299357_151304047
ES.1560.17	chr1	-	3275	18	NNC	ENSMUSG00000052748.15	novel	2855	19	NA	NA	794	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.7378934760426	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTTGCTTTTCCGTTT	NA	False	NA	-3	True	AATAAA	-15	NA	151303393	151243452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151303356
ES.1560.18	chr1	-	3621	20	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	90	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.9945854135071	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCATTTTGCTTTTCCGTT	NA	False	NA	-4	True	AATAAA	-14	NA	151304097	151243453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283280_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.19	chr1	-	3569	20	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	104	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	43.0217364374589	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGCATTTTGCTTTTCC	NA	False	NA	-7	True	AATAAA	-11	NA	151304083	151243456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281155_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.2	chr1	-	3735	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	-46	-1	-46	1	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304252	151243448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.20	chr1	-	4586	14	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	1582	79	intron_retention	FALSE	canonical	3	144	junction_7	19.9428176627918	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGGAGTTGACAATACT	NA	False	NA	NA	False	TATAAA	-14	NA	151287148	151244035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151283387_151286521
ES.1560.21	chr1	-	3101	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	-53	640	-53	25	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTATTGACCAATCTCA	NA	False	NA	NA	False	NA	NA	NA	151304259	151244089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.22	chr1	-	2813	19	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	78	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.1203810578666	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAATGTTGTATTGACCA	NA	False	NA	NA	False	NA	NA	NA	151304109	151244095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.24	chr1	-	2208	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304135	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.25	chr1	-	4944	19	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	50	0	intron_retention	FALSE	canonical	3	144	junction_6	18.9857809042243	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304137	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.26	chr1	-	2747	18	NIC	ENSMUSG00000052748.15	novel	2855	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.2341084522957	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304218	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.27	chr1	-	2224	18	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	142	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	57.2085361549877	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304045	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151303941
ES.1560.28	chr1	-	6944	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	80	0	intron_retention	FALSE	canonical	3	144	junction_6	19.443645834097	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304107	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.29	chr1	-	2470	21	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	43.0041858427758	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304082	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151286620_151287048_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.3	chr1	-	3745	21	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.7749047511513	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304163	151243448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151280154_151280254_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.32	chr1	-	4418	9	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	790	0	intron_retention	FALSE	canonical	1	2	junction_3	58.937997081679	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151277988	151244114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151246395_151248058_151248126_151255133_151255261_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830
ES.1560.36	chr1	-	2912	20	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	173	-25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	43.3092340118423	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304014	151244139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151303941
ES.1560.37	chr1	-	157	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	4170	False	NA	NA	False	NA	NA	NA	151248660	151248503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151248500_151248700
ES.1560.38	chr1	-	3222	14	NNC	ENSMUSG00000052748.15	novel	2855	19	NA	NA	80	-3082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.2663213370732	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCTATATCTCACATT	NA	False	NA	NA	False	ATTAAA	-10	NA	151304107	151270268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151270692_151270736_151271741_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.39	chr1	-	2060	13	ISM	ENSMUSG00000052748.15	ENSMUST00000111883.9	2855	19	70	26154	70	-3082	5prime_fragment	FALSE	canonical	3	144	junction_8	14.9071198499986	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCTATATCTCACATT	NA	False	NA	NA	False	ATTAAA	-10	NA	151304117	151270268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.4	chr1	-	3683	21	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	104	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.6898736064062	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	False	NA	1	True	AATAAA	-19	NA	151304083	151243448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151261778_151261899_151264370_151264520_151267186_151267326_151270359_151270521_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.40	chr1	-	1982	13	NNC	ENSMUSG00000052748.15	novel	752	8	NA	NA	104	-4343	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	46.6294494451259	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCAGTTATTCTTA	NA	False	NA	NA	False	NA	NA	NA	151304083	151271529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151271741_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.41	chr1	-	4878	1	FSM	ENSMUSG00000052748.15	ENSMUST00000189595.2	2850	1	-2535	507	-2535	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTAGTTACACATCTT	NA	False	NA	NA	False	NA	NA	NA	151282893	151278015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151278000_151282900
ES.1560.42	chr1	-	3303	1	Genic_Genomic	ENSMUSG00000052748.15	novel	NA	NA	NA	NA	5012	1289	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATTTTGCTGAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	151294083	151290780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_151290800_151294100
ES.1560.43	chr1	-	176	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTTGGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	151299834	151299658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151299700_151299800
ES.1560.6	chr1	-	5561	14	NNC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	-1826	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	77.3044392733105	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151282184	151243449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255261_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270692_151270736_151272581_151272745_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166
ES.1560.7	chr1	-	5595	19	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	104	0	intron_retention	FALSE	canonical	3	144	junction_7	21.1070171468994	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304083	151243449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.1560.8	chr1	-	3290	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	91	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.2341084522957	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304096	151243449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ES.15600.1	chr17	-	178	2	Intergenic	novelGene_12996	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCACAATCT	2119	False	NA	NA	False	NA	NA	NA	66493337	66466271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66466326_66493213
ES.15600.2	chr17	-	176	2	Intergenic	novelGene_12997	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCACAATCT	2117	False	NA	NA	False	NA	NA	NA	66493339	66466271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66466280_66493171
ES.15600.3	chr17	-	177	1	Intergenic	novelGene_12998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2117	False	NA	NA	False	NA	NA	NA	66493339	66493162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66493200_66493300
ES.15601.1	chr17	-	2045	1	FSM	ENSMUSG00000117246.2	ENSMUST00000232894.2	779	1	-295	-971	-295	971	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTAAAAAAAAAGAGAG	NA	False	NA	NA	False	AATAAA	-7	NA	66535317	66533272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66533300_66535300
ES.15602.1	chr17	-	176	1	Genic_Genomic	ENSMUSG00000117220.2	novel	NA	NA	NA	NA	2890	69	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	66539050	66538874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_66538900_66539000
ES.15603.1	chr17	+	156	1	Intergenic	novelGene_12999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	66578219	66578375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66578200_66578400
ES.15604.1	chr17	-	179	1	Intergenic	novelGene_13000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	66635977	66635798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66635800_66636000
ES.15605.1	chr17	+	1619	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGTCATAGTGCATAAAG	NA	False	NA	NA	False	NA	NA	NA	66650828	66652447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66650800_66652400
ES.15606.1	chr17	+	5006	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTGGCTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	66659739	66664745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66659700_66664700
ES.15607.1	chr17	+	5849	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66677326	66683175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66677300_66683200
ES.15607.2	chr17	+	8614	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAGAAAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	66677326	66685940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66677300_66685900
ES.15607.3	chr17	+	2195	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTCTCTCTACATAGG	NA	False	NA	NA	False	NA	NA	NA	66677326	66679521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66677300_66679500
ES.15608.1	chr17	+	177	2	Intergenic	novelGene_13001	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTGTTTTACTC	NA	False	NA	NA	False	NA	NA	NA	66738913	66796647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66739074_66796630
ES.15608.2	chr17	+	177	1	Intergenic	novelGene_13002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTTCA	NA	False	NA	NA	False	NA	NA	NA	66738914	66739091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66738900_66739100
ES.15608.3	chr17	+	6706	1	Antisense	novelGene_ENSMUSG00000052105.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66740712	66747418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_66740700_66747400
ES.15608.4	chr17	+	133	1	Intergenic	novelGene_13003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66748722	66748855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66748700_66748900
ES.15608.5	chr17	+	929	1	FSM	ENSMUSG00000117003.2	ENSMUST00000233518.2	2746	1	1815	2	1815	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGCGTGCTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	66758663	66759592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_66758700_66759600
ES.15608.6	chr17	+	212	1	Intergenic	novelGene_13007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCGACTGCTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	66774219	66774431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66774200_66774400
ES.15608.7	chr17	+	1493	2	Intergenic	novelGene_13012	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAACTATACTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	66791223	66793987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66791382_66792652
ES.15608.8	chr17	+	1444	2	Intergenic	novelGene_13013	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAACTATACTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	66791235	66793987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66791345_66792652
ES.15609.1	chr17	-	7290	14	FSM	ENSMUSG00000052105.18	ENSMUST00000086693.12	7221	14	-68	-1	-68	1	multi-exon	FALSE	canonical	3	123	junction_12	28.2669020495577	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGGTGTCACCGTTTA	NA	False	NA	-12	True	AATAAA	-22	NA	66756813	66643975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.10	chr17	-	7273	14	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	50.5525679879619	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66756766	66643978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687465_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.13	chr17	-	6435	15	NNC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-25	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	51.0094529054595	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66756770	66643978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311_66755782_66756590
ES.15609.14	chr17	-	3630	7	NNC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	-12034	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	73.7369574154568	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTCTTGGTGTCACCG	NA	False	NA	-16	True	AATAAA	-18	NA	66665574	66643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66665388
ES.15609.18	chr17	-	7388	15	NNC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6257555835997	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTCTTGGTGTCACC	NA	False	NA	-17	True	AATAAA	-17	NA	66756760	66643980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687465_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.21	chr17	-	8297	14	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	51.3557035198981	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGGGTCTTGGTGTCAC	NA	False	NA	-18	True	AATAAA	-16	NA	66756779	66643981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66646197_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.23	chr17	-	4933	8	NNC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	5139	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.7929883619393	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGGTCTTGGTGTCA	NA	False	NA	-19	True	AATAAA	-15	NA	66676520	66643982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673535_66675224
ES.15609.25	chr17	-	4559	10	NIC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	-796	-5	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	60.4170689641779	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCAACAGGGTCTTGG	7342	False	NA	-24	True	AATAAA	-10	NA	66686722	66643987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675288_66675456_66684847_66685007_66686123
ES.15609.27	chr17	-	4377	9	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	5906	5199	-1073	1759	internal_fragment	FALSE	canonical	3	146	junction_2	25.430972749779	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGGACACTTACAGGCA	7065	False	NA	NA	False	NA	NA	NA	66686999	66649181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123
ES.15609.28	chr17	-	4481	11	NNC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	2909	1323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.1729668007275	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGGTCAGGCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	66743118	66649617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66651361_66653348_66653381_66655233_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074
ES.15609.29	chr17	-	4689	13	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-34	7233	-34	-273	5prime_fragment	FALSE	canonical	3	123	junction_11	29.0984917516737	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGCAACGACTGGGATT	NA	False	NA	NA	False	AATACA	-11	NA	66756779	66651213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.30	chr17	-	4695	12	NNC	ENSMUSG00000052105.18	novel	2423	6	NA	NA	-25	8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.4147861750229	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66756770	66654952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66655147_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.31	chr17	-	3318	9	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-24	8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	65.5858216385218	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66756769	66654952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.32	chr17	-	5265	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-504	10972	-504	8	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66757249	66654952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.33	chr17	-	4921	12	NIC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	-37	8	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	61.8816519089076	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66756782	66654952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.34	chr17	-	4721	11	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-24	8	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	58.3794484386415	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTACAGTTTTCTGAT	NA	False	NA	3	True	AATAAA	-27	NA	66756769	66654952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675288_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.35	chr17	-	2176	1	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-3591	5	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAGTACAGTTTTCT	NA	False	NA	0	True	AATAAA	-24	NA	66657131	66654955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655000_66657100
ES.15609.36	chr17	-	4851	12	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-18	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	72.9072772388337	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAGTACAGTTTTCT	NA	False	NA	0	True	AATAAA	-24	NA	66756763	66654955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66691294_66691370_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.38	chr17	-	3073	9	NNC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	85.5240280564474	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAGTACAGTTTTCT	1173	False	NA	0	True	AATAAA	-24	NA	66692891	66654955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687465_66692854
ES.15609.39	chr17	-	4815	11	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-24	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	57.4560701753957	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAGTACAGTTTTCT	NA	False	NA	0	True	AATAAA	-24	NA	66756769	66654955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687465_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.4	chr17	-	7381	15	NIC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	55.073235100998	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCTTGGTGTCACCGTT	NA	False	NA	-14	True	AATAAA	-20	NA	66756783	66643977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.40	chr17	-	4732	10	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-34	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	63.2209529261375	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAGTACAGTTTTCT	NA	False	NA	0	True	AATAAA	-24	NA	66756779	66654955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66743074_66743234_66745161_66745387_66755311
ES.15609.42	chr17	-	4013	9	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	-24	1570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.9280481289653	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTGTCTGAATGTT	NA	False	NA	NA	False	NA	NA	NA	66756769	66671768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66671984_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.43	chr17	-	4268	8	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	-38	28902	-38	456	5prime_fragment	FALSE	canonical	3	123	junction_6	18.2107839771171	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCATGCACAAAGTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	66756783	66672882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.44	chr17	-	3118	6	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	312	-458	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.6364334737754	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTGCTTAAATGAAAGAA	NA	False	NA	NA	False	AATAAA	-43	NA	66756433	66673796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66675017_66675123_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.45	chr17	-	3559	5	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-37	-473	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	60.1685133603947	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCACCCTTCCTAGACT	NA	False	NA	NA	False	AATAAA	-32	NA	66756782	66673811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.46	chr17	-	4913	7	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	109	-473	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	55.2439036355043	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCACCCTTCCTAGACT	NA	False	NA	NA	False	AATAAA	-32	NA	66756636	66673811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66675456_66684847_66685007_66686123_66687465_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.47	chr17	-	3803	8	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	-38	-479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.7592131843713	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTGAGCACCCTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	66756783	66673817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66674007_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.48	chr17	-	5077	8	NIC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	28	-480	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	54.6988042252614	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATTGAGCACCCTTC	NA	False	NA	NA	False	AATAAA	-25	NA	66756717	66673818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.49	chr17	-	3752	8	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	-23	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.7592131843713	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAATTGAGCACCCTT	NA	False	NA	NA	False	AATAAA	-24	NA	66756768	66673819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66673973_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.5	chr17	-	8500	4	NIC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	-8383	-1	intron_retention	FALSE	canonical	3	146	junction_2	28.6472802664872	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCTTGGTGTCACCGTT	NA	False	NA	-14	True	AATAAA	-20	NA	66661923	66643977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117
ES.15609.50	chr17	-	3448	6	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	11448	29849	730	-491	internal_fragment	FALSE	canonical	3	123	junction_5	17.749366185867	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCTTTTCTAATAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	66745297	66673829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ES.15609.51	chr17	-	4785	8	NNC	ENSMUSG00000052105.18	novel	611	4	NA	NA	78	-492	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.7592131843713	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTCTTTTCTAATAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	66756667	66673830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66675019_66675125_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.52	chr17	-	2773	3	ISM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	5582	30059	-1397	-703	internal_fragment	FALSE	canonical	3	163	junction_1	6	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCCTGAGAATGCCA	6741	False	NA	NA	False	AGTAAA	-16	NA	66687323	66674041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66675456_66684847_66685007_66686123
ES.15609.53	chr17	-	3324	5	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	11	41994	11	6766	5prime_fragment	FALSE	canonical	3	123	junction_3	10.917302780449	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTCTCGGTTGGTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	66756734	66685974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.54	chr17	-	2044	4	FSM	ENSMUSG00000052105.18	ENSMUST00000127259.2	611	4	-1424	-9	-43	9	multi-exon	FALSE	canonical	3	123	junction_2	12.5521135891752	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	66756788	66692731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.55	chr17	-	3943	4	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-33	-23594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.1221075280038	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTGTGGGTTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	66756778	66716334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66718427_66743074_66743234_66745161_66745387_66755311
ES.15609.7	chr17	-	5306	9	NNC	ENSMUSG00000052105.18	novel	5463	12	NA	NA	4670	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.2525645496844	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66676989	66643978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675288_66676801_66676838
ES.15609.8	chr17	-	7295	14	NNC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.8643457658793	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66756774	66643978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651408_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.15609.9	chr17	-	7326	15	NNC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.9124999754379	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	False	NA	-15	True	AATAAA	-19	NA	66756774	66643978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66691294_66691373_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ES.1561.1	chr1	+	2592	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	1	16	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGACTTACTGTTCACAT	NA	False	NA	31	True	AATAAA	-32	NA	151304293	151333928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.10	chr1	+	2566	14	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	51.733614448493	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTCTGACTGGGCTC	NA	False	NA	11	True	AATAAA	-12	NA	151304408	151333908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151333213_151333341_151333432
ES.1561.11	chr1	+	2501	14	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.4787865117687	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTCTGACTGGGCTC	NA	False	NA	11	True	AATAAA	-12	NA	151304408	151333908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311476_151311593_151315266_151315332_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.12	chr1	+	2762	16	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.3971974359633	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	13	True	AATAAA	-14	NA	151304409	151333910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151320690_151320823_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.13	chr1	+	2229	11	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	-8	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.6182013517187	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304409	151326666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315032_151315145_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151326074
ES.1561.14	chr1	+	2705	6	NIC	ENSMUSG00000053286.12	novel	1567	7	NA	NA	-8	30	intron_retention	FALSE	canonical	3	157	junction_2	25.3803073267445	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATCCAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304409	151319489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151316687_151318337_151318462_151318997
ES.1561.15	chr1	+	4339	15	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	53.1929487424637	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	13	True	AATAAA	-14	NA	151304424	151333910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151326074_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.2	chr1	+	2622	16	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.4304250485063	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	13	True	AATAAA	-14	NA	151304333	151333910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304466_151304551_151304854_151309544_151309656_151311476_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.3	chr1	+	3418	2	FSM	ENSMUSG00000053286.12	ENSMUST00000188679.2	3380	2	-11	-27	-11	27	multi-exon	FALSE	canonical	3	166	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCATCAGACTGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	151304376	151312485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151304854_151309544
ES.1561.4	chr1	+	2663	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	89	-3	-6	3	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTGGGCTCGCGTGAC	NA	False	NA	18	True	AATAAA	-19	NA	151304381	151333915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.5	chr1	+	2639	7	NNC	ENSMUSG00000053286.12	novel	2441	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_4	94.9415024575074	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151304383	151319457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315032_151315145_151315266_151316687_151318337_151318462_151318997
ES.1561.6	chr1	+	2045	10	NNC	ENSMUSG00000053286.12	novel	2371	9	NA	NA	-2	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.7384613735569	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCCTTTTTAATCTTT	NA	False	NA	NA	False	NA	NA	NA	151304390	151326705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151323976_151324249_151325650_151325706_151326074
ES.1561.7	chr1	+	5801	17	NNC	ENSMUSG00000053286.12	novel	2441	15	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	86.6259695111691	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304398	151333912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151320690_151323860_151323900_151324249_151325650_151325864_151326074_151326132_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.8	chr1	+	3865	14	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	148	junction_9	25.4304946702104	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTGACTGGGCTCGC	NA	False	NA	13	True	AATAAA	-14	NA	151304399	151333910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ES.1561.9	chr1	+	2765	16	NNC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	85.731726267986	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTCTGACTGGGCTCG	NA	False	NA	12	True	AATAAA	-13	NA	151304399	151333909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151320690_151320823_151324004_151324249_151325650_151325864_151326074_151326132_151327798_151327990_151328827_151328907_151329635_151329803_151333213_151333341_151333432
ES.15610.1	chr17	-	3475	3	Intergenic	novelGene_13004	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTGTCTTGGCTCGTT	NA	False	NA	NA	False	NA	NA	NA	66790866	66764269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66766979_66770692_66771315_66790722
ES.15610.2	chr17	-	177	1	Intergenic	novelGene_13005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTAGGGTCTG	NA	False	NA	NA	False	NA	NA	NA	66766999	66766822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66766800_66767000
ES.15610.3	chr17	-	2338	5	Intergenic	novelGene_13006	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTATTTATGTA	NA	False	NA	NA	False	NA	NA	NA	66786688	66767258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66767435_66767628_66769503_66771232_66771315_66785427_66785461_66786515
ES.15610.4	chr17	-	4711	1	Intergenic	novelGene_13008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTTGCTTTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	66786658	66781947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66781900_66786700
ES.15610.5	chr17	-	176	1	Intergenic	novelGene_13009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTCATCATCTCTG	NA	False	NA	NA	False	NA	NA	NA	66783992	66783816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66783800_66784000
ES.15610.6	chr17	-	2080	1	Intergenic	novelGene_13010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66791042	66788962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66789000_66791000
ES.15610.7	chr17	-	90	1	Intergenic	novelGene_13011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTGGCTTGGCTTCA	NA	False	NA	NA	False	NA	NA	NA	66791119	66791029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66791000_66791100
ES.15611.1	chr17	+	4598	1	Intergenic	novelGene_13015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGAAGGGGCATAATCA	NA	False	NA	NA	False	CATAAA	-38	NA	66820466	66825064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66820500_66825100
ES.15612.1	chr17	-	2095	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	-22	-4	-22	4	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCCGTGTGTTTGTGC	NA	False	NA	0	True	AATAAA	-26	NA	66826746	66801502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ES.15612.10	chr17	-	2397	8	NNC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.90581768899	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACAGTTGAATTTGCCG	NA	False	NA	-11	True	AATAAA	-15	NA	66826717	66801513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66809080_66809233_66811983_66812174_66813027_66813089_66826342
ES.15612.11	chr17	-	1612	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	8	449	8	-449	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGAAGCGT	NA	False	NA	NA	False	NA	NA	NA	66826716	66801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ES.15612.12	chr17	-	183	1	Intergenic	novelGene_13014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	66809861	66809678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66809700_66809900
ES.15612.13	chr17	-	179	1	Intergenic	novelGene_13016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGTATAGCTCAGG	NA	False	NA	NA	False	NA	NA	NA	66822898	66822719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66822700_66822900
ES.15612.2	chr17	-	4659	1	Genic_Genomic	ENSMUSG00000023460.14	novel	NA	NA	NA	NA	1152	3	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGCCGTGTGTTTGTG	NA	False	NA	-1	True	AATAAA	-25	NA	66806162	66801503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_66801500_66806200
ES.15612.3	chr17	-	4944	6	NNC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	8	0	intron_retention	TRUE	non_canonical	0	0	junction_2	115.27462860491	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	66826716	66801506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66802799_66804338_66805818_66805895_66807444_66811983_66812174_66813027_66813089_66826342
ES.15612.4	chr17	-	2047	6	NNC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.4966320655804	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAATTTGCCGTGTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	66826715	66801507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66802799_66804338_66804432_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ES.15612.6	chr17	-	2273	7	NIC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	101.840425284963	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAATTTGCCGTGTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	66826739	66801507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66811983_66812174_66813027_66813089_66826342
ES.15612.7	chr17	-	9481	7	NNC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	124.41998767615	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAATTTGCCGTGTGT	NA	False	NA	-6	True	AATAAA	-20	NA	66826694	66801508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66802799_66804338_66804444_66805013_66805818_66805895_66809661_66809870_66811722_66811774_66813089_66826342
ES.15612.8	chr17	-	10059	6	NNC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	122.729621526345	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGAATTTGCCGTGTG	NA	False	NA	-7	True	AATAAA	-19	NA	66826703	66801509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66802799_66804338_66805818_66805895_66809661_66809870_66811722_66811774_66813089_66826342
ES.15613.1	chr17	+	150	1	Intergenic	novelGene_13017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTAAAAAAAGGAATGTG	NA	False	NA	NA	False	NA	NA	NA	66845565	66845715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66845600_66845700
ES.15614.1	chr17	-	2149	2	ISM	ENSMUSG00000024105.4	ENSMUST00000024914.4	2544	4	34678	8	34678	-8	3prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGACTTTTTTCCTCGC	NA	False	NA	NA	False	NA	NA	NA	66866938	66861507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66863260_66866541
ES.15614.2	chr17	-	1192	2	ISM	ENSMUSG00000024105.4	ENSMUST00000024914.4	2544	4	34908	735	34908	-735	3prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTACTATCCCTTGCT	NA	False	NA	NA	False	AAAAAG	-5	NA	66866708	66862234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_66863260_66866541
ES.15615.1	chr17	+	213	1	Intergenic	novelGene_13018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCTTCCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	66899503	66899716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_66899500_66899700
ES.15616.1	chr17	-	178	1	Intergenic	novelGene_13019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACATAGAA	NA	False	NA	NA	False	NA	NA	NA	66915446	66915268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_66915300_66915400
ES.15617.2	chr17	-	5520	31	FSM	ENSMUSG00000033278.11	ENSMUST00000223982.2	4802	31	-124	-594	-54	-2	multi-exon	TRUE	canonical	0	0	junction_5	2.09337579574768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGTGGCAATCATTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	67661506	66973943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_66974677_66984995_66985132_66990365_66990530_66992608_66992735_66995245_66995378_66996338_66996513_66997419_66997570_67000457_67000594_67000766_67000922_67005360_67005478_67032734_67032833_67051714_67051752_67054095_67054173_67069123_67069212_67116460_67116649_67121461_67121537_67124820_67124973_67197918_67198052_67226018_67226056_67227017_67227292_67247477_67247581_67251122_67251325_67260062_67260173_67263804_67264114_67349089_67349384_67352978_67353154_67370036_67370153_67382583_67382663_67402418_67402691_67498243_67498367_67660951
ES.15617.3	chr17	-	5193	31	NNC	ENSMUSG00000033278.11	novel	4802	31	NA	NA	14355	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.09337579574768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGGTGGCAATCATTT	NA	False	NA	-2	True	ATTAAA	-18	NA	67646713	66973944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_66974677_66984995_66985132_66990365_66990530_66992608_66992735_66995245_66995378_66996338_66996513_66997419_66997570_67000457_67000594_67000766_67000922_67005360_67005478_67032734_67032833_67051714_67051752_67054095_67054173_67069123_67069212_67116460_67116649_67121461_67121537_67124820_67124973_67197918_67198052_67226018_67226056_67227017_67227292_67247477_67247581_67251122_67251325_67260062_67260173_67263804_67264114_67349089_67349384_67352978_67353154_67370036_67370153_67382583_67382663_67402418_67402691_67498243_67498367_67646484
ES.15618.1	chr17	+	3696	3	Intergenic	novelGene_13020	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCTCTCCCATATCCTA	NA	False	NA	NA	False	AATGAA	-20	NA	67781996	67787289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_67782346_67783781_67783972_67784132
ES.15618.2	chr17	+	3349	3	Intergenic	novelGene_13021	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCTCCCATATCCTAC	NA	False	NA	NA	False	AATGAA	-21	NA	67781996	67787290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_67782346_67784132_67786612_67786769
ES.15618.3	chr17	+	1248	4	Intergenic	novelGene_13022	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	67782004	67792853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_67782346_67783690_67783972_67784132_67784241_67792335
ES.15619.1	chr17	+	2238	2	Intergenic	novelGene_13023	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGCAGCAGACTTCT	NA	False	NA	NA	False	AATAAA	-28	NA	67796867	67799137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_67798816_67798847
ES.1562.1	chr1	-	2529	1	Antisense	novelGene_ENSMUSG00000053286.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGCAACA	NA	False	NA	NA	False	NA	NA	NA	151332450	151329921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_151329900_151332400
ES.15620.1	chr17	+	177	1	Intergenic	novelGene_13024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGCAATGAGCTA	NA	False	NA	NA	False	NA	NA	NA	67986089	67986266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_67986100_67986300
ES.15621.1	chr17	+	9451	63	NNC	ENSMUSG00000032796.9	novel	565	5	NA	NA	-1596	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	47.638248346419	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68002657	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68002741_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.10	chr17	+	9232	61	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.7519604018748	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68004257	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68004412_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.11	chr17	+	9426	62	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	47.9437489532531	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68004257	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.15	chr17	+	9503	63	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	47.6458164936276	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68004264	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105527_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.17	chr17	+	9495	63	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.6058653772227	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68004271	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052851_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.19	chr17	+	9469	63	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	35	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_48	47.3921608440605	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGAATTAATGGTCTC	NA	False	NA	13	True	ATTAAA	-13	NA	68004294	68129633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114779_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.20	chr17	+	4814	29	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	46	45099	40	20636	5prime_fragment	FALSE	canonical	3	108	junction_11	22.3044792792472	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCAAGTGTTTTCTAG	NA	False	NA	NA	False	AATAAA	-14	NA	68004299	68084543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902
ES.15621.22	chr17	+	9834	62	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	45	-6	intron_retention	FALSE	canonical	3	108	junction_11	41.3549926923686	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68004304	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.26	chr17	+	9457	63	NNC	ENSMUSG00000032796.9	novel	565	5	NA	NA	14253	-5	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	46.6993979287685	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTAATGGTCTCCTCT	NA	False	NA	17	True	ATTAAA	-17	NA	68018512	68129637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68018607_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.27	chr17	+	9248	62	NNC	ENSMUSG00000032796.9	novel	565	5	NA	NA	14315	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.0148499492583	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGTCTCCTCTTTT	NA	False	NA	20	True	ATTAAA	-20	NA	68018574	68129640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68018678_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119411_68122161_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.28	chr17	+	5046	32	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	19434	40185	19428	25550	internal_fragment	FALSE	canonical	3	108	junction_10	22.7983970811393	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGTGTTGGTTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	68023687	68089457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014
ES.15621.3	chr17	+	9587	63	FSM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	-61	0	-61	0	multi-exon	FALSE	canonical	3	108	junction_11	42.4970342357505	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68004192	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.30	chr17	+	9077	60	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	40210	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	52.5142023990205	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68044469	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110018_68111383_68111546_68112356_68112482_68114772_68114924_68116208_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.31	chr17	+	8275	55	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	48590	0	48584	0	3prime_fragment	FALSE	canonical	3	108	junction_3	42.5010005530573	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68052843	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.32	chr17	+	7868	52	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	53256	0	53250	0	3prime_fragment	FALSE	canonical	3	112	junction_2	41.0538042140553	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68057509	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.33	chr17	+	7380	49	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	56490	0	56484	0	3prime_fragment	FALSE	canonical	3	115	junction_12	39.671694140435	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68060743	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.34	chr17	+	7261	48	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	59407	6	-55740	-6	3prime_fragment	FALSE	canonical	3	115	junction_11	39.2663595153415	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68063660	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.36	chr17	+	7156	47	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-50782	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.464029759208	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68068618	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090960_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.37	chr17	+	11063	42	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-50753	-11	intron_retention	FALSE	canonical	3	115	junction_10	39.1737234224892	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTGGAATTAATGGTC	NA	False	NA	11	True	ATTAAA	-11	NA	68068647	68129631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68112482_68114772_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68123040_68123997_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.38	chr17	+	8704	45	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-48605	-6	intron_retention	FALSE	canonical	3	115	junction_9	39.0054562828678	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68070795	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.39	chr17	+	6301	41	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	72117	6	-43030	-6	3prime_fragment	FALSE	canonical	3	115	junction_4	39.1849460890276	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTAATGGTCTCCTC	NA	False	NA	16	True	ATTAAA	-16	NA	68076370	68129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.4	chr17	+	2833	11	NIC	ENSMUSG00000032796.9	novel	2500	16	NA	NA	-25	-5545	intron_retention	FALSE	canonical	3	108	junction_10	12.774975538137	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTATGTTTTCTAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	68004228	68058362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68004412_68023688_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511
ES.15621.40	chr17	+	6014	40	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-41442	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	48.1289496274534	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGTCTCCTCTTTT	NA	False	NA	20	True	ATTAAA	-20	NA	68077958	68129640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101231_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.41	chr17	+	5430	36	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	78509	1	-36638	-1	3prime_fragment	FALSE	canonical	3	147	junction_6	36.7396132760467	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATGGTCTCCTCTTTTG	NA	False	NA	21	True	ATTAAA	-21	NA	68082762	68129641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.42	chr17	+	5208	35	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-35383	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	49.0428807499023	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTAATGGTCTCCTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	68084017	68129639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123978_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.43	chr17	+	5163	34	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	81789	7	-33358	-7	3prime_fragment	FALSE	canonical	3	147	junction_4	37.4555261222994	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68086042	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.44	chr17	+	4947	33	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-33358	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	50.1260033409557	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAATGGTCTCCTCTTTT	NA	False	NA	20	True	ATTAAA	-20	NA	68086042	68129640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119411_68122161_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.46	chr17	+	6658	30	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-31003	-7	intron_retention	FALSE	canonical	3	147	junction_1	38.1332228808037	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68088397	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.47	chr17	+	3938	25	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	94170	11	-20977	-11	3prime_fragment	FALSE	canonical	3	157	junction_1	33.153263623494	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGTGGAATTAATGGTC	NA	False	NA	11	True	ATTAAA	-11	NA	68098423	68129631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.48	chr17	+	3534	22	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	99436	7	-15711	-7	3prime_fragment	FALSE	canonical	3	165	junction_3	28.5405388575031	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68103689	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.49	chr17	+	2525	15	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	110517	7	-4630	-7	3prime_fragment	FALSE	canonical	3	214	junction_3	16.3777163193387	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68114770	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.5	chr17	+	5253	33	ISM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	-25	40160	-25	25575	5prime_fragment	FALSE	canonical	3	108	junction_11	22.4519452108275	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCCATTTTCTGATAC	NA	False	NA	NA	False	AATAAA	-39	NA	68004228	68089482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014
ES.15621.50	chr17	+	3670	13	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-3145	0	intron_retention	FALSE	canonical	3	214	junction_2	15.4802741864894	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68116255	68129642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.51	chr17	+	2260	9	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-1054	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	80.4487414444751	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68118346	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123988_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.6	chr17	+	11447	61	NIC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-14	-7	intron_retention	FALSE	canonical	3	108	junction_11	43.0710620822019	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTAATGGTCTCCT	NA	False	NA	15	True	ATTAAA	-15	NA	68004239	68129635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68089158_68090988_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.8	chr17	+	9300	62	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_55	50.7835249552438	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTAATGGTCTCCTCTTT	NA	False	NA	19	True	ATTAAA	-19	NA	68004252	68129639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098442_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119411_68122161_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ES.15621.9	chr17	+	8782	34	NNC	ENSMUSG00000032796.9	novel	9526	63	NA	NA	2	-28304	intron_retention	FALSE	non_canonical	0	0	junction_1	33.1068337750365	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTCTTTCTTCTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	68004255	68094867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_68004412_68023686_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988
ES.15622.1	chr17	-	4658	3	Antisense	novelGene_ENSMUSG00000032796.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGCGTCTAGATTTGA	NA	False	NA	NA	False	NA	NA	NA	68119351	68114459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_68116970_68117058_68117177_68117321
ES.15622.2	chr17	-	4861	1	Antisense	novelGene_ENSMUSG00000032796.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-38	NA	68119351	68114490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_68114500_68119400
ES.15623.1	chr17	+	173	1	Intergenic	novelGene_13025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATACAAAT	NA	False	NA	NA	False	NA	NA	NA	68205216	68205389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_68205200_68205400
ES.15624.1	chr17	+	152	1	Intergenic	novelGene_13026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAATAAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	68209325	68209477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_68209300_68209500
ES.15625.1	chr17	-	993	1	Genic_Genomic	ENSMUSG00000024043.14	novel	NA	NA	NA	NA	29846	503	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGAAAATATTTTGATA	NA	False	NA	NA	False	AATAAA	-19	NA	68150197	68149204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_68149200_68150200
ES.15625.10	chr17	-	3661	17	NIC	ENSMUSG00000024043.14	novel	5322	18	NA	NA	3	796	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10.9715541287458	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGAATTTCTATTTTC	NA	False	NA	NA	False	NA	NA	NA	68311112	68151308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_68152813_68156047_68156113_68159905_68160031_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.11	chr17	-	2953	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-28	2397	-28	0	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGGATTTCCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	68311143	68152104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.12	chr17	-	3393	17	NNC	ENSMUSG00000024043.14	novel	818	8	NA	NA	-13	-5451	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.6768953235479	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTAAGTCCTTCAAG	NA	False	NA	NA	False	NA	NA	NA	68311128	68158180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_68159409_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.13	chr17	-	3019	1	Intergenic	novelGene_13027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	68306274	68303255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_68303300_68306300
ES.15625.2	chr17	-	5458	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-4	-132	-4	132	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGTGTGTTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	68311119	68149575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.3	chr17	-	4046	9	NNC	ENSMUSG00000024043.14	novel	5322	18	NA	NA	4045	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.9726294948374	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACATCCGTGGAAATGCCA	NA	False	NA	NA	False	NA	NA	NA	68175998	68149595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164496_68165148_68165347_68168267_68168351_68171457_68171621_68175945
ES.15625.4	chr17	-	5361	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-32	-7	-32	7	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCTTTCAAATGCGTT	NA	False	NA	NA	False	AATAAA	-25	NA	68311147	68149700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.8	chr17	-	4863	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-15	474	-15	-474	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTGTTTGTTCGTTTGT	NA	False	NA	NA	False	NA	NA	NA	68311130	68150181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15625.9	chr17	-	3735	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	-13	1600	-13	797	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGAATTTCTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	68311128	68151307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ES.15626.1	chr17	+	3186	3	Intergenic	novelGene_13028	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCCAAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-43	NA	69258418	69327096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_69258474_69302117_69302179_69324026
ES.15627.1	chr17	-	2259	1	Intergenic	novelGene_13029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAAAGTCTATTCTAAT	8365	False	NA	NA	False	NA	NA	NA	69266238	69263979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_69264000_69266200
ES.15628.1	chr17	-	2166	5	Intergenic	novelGene_13030	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_4	1.4790199457749	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTTTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	69296543	69276435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_69277962_69287526_69287768_69288771_69288890_69293963_69294134_69296432
ES.15629.1	chr17	+	3957	19	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	15.4121364715371	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69382676	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.10	chr17	+	3905	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-59	9	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTGAAGTGATTGCT	NA	False	NA	29	True	AATAAA	-30	NA	69463679	69596993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.11	chr17	+	5821	13	FSM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	-68	-1787	-34	1787	multi-exon	FALSE	canonical	3	33	junction_11	6.11180551610297	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGGTGGTGAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	69463704	69581630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605
ES.15629.12	chr17	+	3980	21	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	17.7602787140292	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	16	True	AATAAA	-17	NA	69463720	69596980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581095_69581162_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.13	chr17	+	3971	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	-116	-667	-15	2	multi-exon	FALSE	canonical	3	30	junction_19	11.3154222706638	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTTCCATGTGAAGT	NA	False	NA	22	True	AATAAA	-23	NA	69463723	69596986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.14	chr17	+	3368	20	NNC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-13	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	15.8089353744371	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCTAATCTGGTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	69463725	69596381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581895_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.15	chr17	+	2979	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-13	19	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCTCCTTTTTCA	NA	False	NA	NA	False	ATTAAA	-39	NA	69463725	69596113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.16	chr17	+	3116	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-12	61	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	16.538022035283	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCTAATCTGGTT	NA	False	NA	NA	False	AGTAAA	-13	NA	69463726	69596380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.17	chr17	+	4925	12	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	-41	7346	-7	21	5prime_fragment	FALSE	canonical	3	33	junction_11	5.96130774936545	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGATAACTAGAGAATTT	NA	False	NA	NA	False	NA	NA	NA	69463731	69572497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120
ES.15629.18	chr17	+	3040	20	NNC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	9	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	15.310453040298	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAAAAACAGTAAAACTT	NA	False	NA	NA	False	ATTAAA	-9	NA	69463747	69596083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595849
ES.15629.19	chr17	+	3764	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	13.0085442007252	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463757	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.2	chr17	+	4076	20	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-1	2	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	15.2069746354206	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTTCCATGTGAAGT	NA	False	NA	22	True	AATAAA	-23	NA	69382676	69596986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.20	chr17	+	3494	17	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	17.7463684665342	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTCTCGTCTTCCA	NA	False	NA	14	True	AATAAA	-15	NA	69463775	69596978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.21	chr17	+	1967	12	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	4	10259	4	-2892	5prime_fragment	FALSE	canonical	3	33	junction_11	5.96130774936545	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGAGTGTGTTTTGCA	NA	False	NA	NA	False	NA	NA	NA	69463776	69569584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120
ES.15629.22	chr17	+	4209	22	NNC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.7247259780385	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTCTCGTCTTCCA	NA	False	NA	14	True	AATAAA	-15	NA	69463780	69596978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69594917_69595098_69595845
ES.15629.24	chr17	+	3843	20	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	17.1045343974312	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463798	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581095_69581162_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.25	chr17	+	3527	17	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	16.3648585007632	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTTCCATGTGAAGT	NA	False	NA	22	True	AATAAA	-23	NA	69463804	69596986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.26	chr17	+	1367	9	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	46	19120	14	4	5prime_fragment	FALSE	canonical	3	49	junction_1	2.6809513236909	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTATTCTAGTTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	69463818	69560723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390
ES.15629.27	chr17	+	4057	13	NIC	ENSMUSG00000024044.20	novel	3966	13	NA	NA	14	191	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	10.012145402238	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTTTATGTGTCA	NA	False	NA	NA	False	AGTAAA	-17	NA	69463818	69580034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605
ES.15629.28	chr17	+	3876	20	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	18.7814371726838	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCTCGTCTTCCATGT	NA	False	NA	17	True	AATAAA	-18	NA	69463819	69596981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.29	chr17	+	2935	19	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	15	-81	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	15.2712107098033	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTCATAGGTGACAAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	69463819	69596238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.3	chr17	+	4310	13	NIC	ENSMUSG00000024044.20	novel	2439	17	NA	NA	1	192	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	13.9253964635362	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTATGTGTCAG	NA	False	NA	NA	False	AGTAAA	-18	NA	69382678	69580035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605
ES.15629.31	chr17	+	1759	9	ISM	ENSMUSG00000024044.20	ENSMUST00000225316.2	3966	13	48	18726	16	398	5prime_fragment	FALSE	canonical	3	49	junction_1	2.6809513236909	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGTGTGATTAATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	69463820	69561117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390
ES.15629.32	chr17	+	3512	18	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	17	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	16.8064495776129	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCTTCCATGTGAAGTGA	NA	False	NA	24	True	AATAAA	-25	NA	69463821	69596988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.33	chr17	+	3555	18	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	15.4433891972	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTCTCGTCTTCCAT	NA	False	NA	15	True	AATAAA	-16	NA	69463823	69596979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.34	chr17	+	3932	21	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	16.8091492943575	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463826	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581095_69581162_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.36	chr17	+	2944	18	NIC	ENSMUSG00000024044.20	novel	3188	20	NA	NA	-2	63	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	15.4433891972	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAATCTGGTTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	69463837	69596382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.37	chr17	+	3694	18	NNC	ENSMUSG00000024044.20	novel	3687	17	NA	NA	15445	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6194949519156	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69530321	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_69530645_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.39	chr17	+	4010	9	NIC	ENSMUSG00000024044.20	novel	4073	22	NA	NA	23	0	intron_retention	FALSE	canonical	1	1	junction_5	21.9089023002066	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	16	True	AATAAA	-17	NA	69555688	69596980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69591533_69591912_69592896_69593029_69593707_69593807_69594251
ES.15629.4	chr17	+	3860	19	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-29	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	16.6474889664745	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTCGTCTTCCATGTG	NA	False	NA	18	True	AATAAA	-19	NA	69382717	69596982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
ES.15629.40	chr17	+	4282	1	NIC	ENSMUSG00000024044.20	novel	4692	22	NA	NA	-4454	1755	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69577316	69581598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69577300_69581600
ES.15629.5	chr17	+	3974	20	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	16.363766473083	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69382722	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.6	chr17	+	3832	19	NIC	ENSMUSG00000024044.20	novel	2439	17	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	18.3034267856805	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCGTCTTCCATG	NA	False	NA	16	True	AATAAA	-17	NA	69382722	69596980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.8	chr17	+	3769	18	NIC	ENSMUSG00000024044.20	novel	2439	17	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	19.2137854201875	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCTTCCATGTGAAGTG	NA	False	NA	23	True	AATAAA	-24	NA	69382738	69596987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.15629.9	chr17	+	4019	20	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.9826220947193	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463619	69596984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ES.1563.1	chr1	-	177	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTTTTTAGCTGGG	5213	False	NA	NA	False	NA	NA	NA	151340100	151339923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151339900_151340100
ES.15630.1	chr17	-	2493	1	Intergenic	novelGene_13031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATACCAGACTCCATTT	NA	False	NA	NA	False	NA	NA	NA	69524485	69521992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_69522000_69524500
ES.15631.1	chr17	-	4792	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	3	3631	intron_retention	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTCCTCTATAATG	NA	False	NA	NA	False	AATAAA	-32	NA	69584200	69578725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69581624_69582306
ES.15631.10	chr17	-	1377	4	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	-14	2449	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	8.37987005998436	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584217	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580313_69582162_69582902_69583120_69583191_69584054
ES.15631.11	chr17	-	4283	1	Genic_Genomic	ENSMUSG00000100572.2	novel	NA	NA	NA	NA	13	2449	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584190	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_69579900_69584200
ES.15631.12	chr17	-	871	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	0	2449	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	9.09670269933013	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584203	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580313_69582162_69582295_69582786_69582902_69583120_69583191_69584054
ES.15631.13	chr17	-	726	4	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	31	2449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.2532930181083	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584172	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580331_69582786_69582902_69583120_69583191_69584054
ES.15631.14	chr17	-	1340	4	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2449	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	18.5472369909914	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584202	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580313_69582162_69582902_69583120_69583243_69584128
ES.15631.15	chr17	-	2467	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	5	2449	intron_retention	FALSE	canonical	3	26	junction_1	0	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584198	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580339_69582162
ES.15631.16	chr17	-	3804	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	0	2449	intron_retention	FALSE	canonical	3	33	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584203	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582295_69582786
ES.15631.17	chr17	-	1884	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	0	975	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATTAAAAGGTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	69584203	69581381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69583191_69584128
ES.15631.18	chr17	-	1915	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	610	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGGTTTGGTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	69584202	69581746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69583191_69583731
ES.15631.19	chr17	-	1133	4	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9.0921211313239	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGGTTTGGTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	69584202	69581746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582041_69582162_69582887_69583120_69583191_69584157
ES.15631.2	chr17	-	1961	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	3	3616	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	9.63068014212911	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGAGCACCTTAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	69584200	69578740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580313_69582162_69582295_69582786_69582902_69583120_69583191_69584128
ES.15631.20	chr17	-	2332	2	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	609	intron_retention	FALSE	canonical	3	22	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTGGTTTGGTGCTTC	NA	False	NA	NA	False	NA	NA	NA	69584201	69581747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582041_69582162
ES.15631.21	chr17	-	1355	3	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	608	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	21.5	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATATTGGTTTGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	69584201	69581748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582887_69583120_69583191_69584054
ES.15631.22	chr17	-	1885	1	Genic_Genomic	ENSMUSG00000100572.2	novel	NA	NA	NA	NA	-29	9	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACGTATGTCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	69584232	69582347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_69582300_69584200
ES.15631.23	chr17	-	314	3	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	-359	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	1.5	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAACAGTTGGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	69584201	69582715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582887_69583120_69583191_69584128
ES.15631.3	chr17	-	4307	2	NIC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	3615	intron_retention	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTGAGCACCTTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	69584201	69578741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_69582902_69584054
ES.15631.4	chr17	-	1908	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	10	3614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.9164338901763	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGTGAGCACCTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	69584193	69578742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580313_69582162_69582295_69582786_69582887_69583120_69583191_69584157
ES.15631.5	chr17	-	5008	2	ISM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	41	-3421	41	3421	intron_retention	FALSE	canonical	3	43	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTGTTTTTGTTT	NA	False	NA	NA	False	TATAAA	-18	NA	69584162	69578935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_69582902_69583120
ES.15631.6	chr17	-	880	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	2	2449	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	15.6923548264752	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584201	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580339_69582162_69582295_69582786_69582887_69583120_69583191_69584054
ES.15631.7	chr17	-	3197	3	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2449	intron_retention	FALSE	canonical	3	14	junction_1	21.5	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584202	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69582887_69583120_69583191_69584054
ES.15631.8	chr17	-	896	5	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	1	2449	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	11.6484977572217	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584202	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580339_69582162_69582295_69582786_69582902_69583120_69583191_69584054
ES.15631.9	chr17	-	1359	4	NNC	ENSMUSG00000100572.2	novel	764	3	NA	NA	30	2449	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	12.675435561221	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCCCACAGCCAAT	NA	False	NA	-6	True	ATTAAA	-12	NA	69584173	69579907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_69580339_69582162_69582902_69583120_69583191_69584054
ES.15632.1	chr17	+	177	1	Intergenic	novelGene_13032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTAGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	69620274	69620451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_69620300_69620500
ES.15633.1	chr17	+	4132	1	Intergenic	novelGene_13033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	69633501	69637633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_69633500_69637600
ES.15634.1	chr17	+	178	1	Intergenic	novelGene_13034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	69671919	69672097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_69671900_69672100
ES.15635.1	chr17	+	179	1	Intergenic	novelGene_13035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTTTCATATCTGTT	NA	False	NA	NA	False	NA	NA	NA	69680471	69680650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_69680500_69680600
ES.15636.1	chr17	+	3805	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-266	204	-266	-204	multi-exon	FALSE	canonical	3	85	junction_1	58	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCTTGATCATTCTTT	NA	False	NA	NA	False	TATAAA	-18	NA	69689778	69697541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.10	chr17	+	3077	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	2	546	2	-546	multi-exon	FALSE	canonical	3	64	junction_1	68.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATCTGTTATTACTGTC	NA	False	NA	21	True	ATTAAA	-28	NA	69690315	69697199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.11	chr17	+	2744	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	17	864	17	-864	multi-exon	FALSE	canonical	3	64	junction_1	68.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATGTTTTCCAAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69690330	69696881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.12	chr17	+	3846	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-485	997	36	-548	multi-exon	FALSE	canonical	3	41	junction_1	80	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATCTGTTATTACTG	NA	False	NA	19	True	ATTAAA	-26	NA	69690349	69697197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69691221_69692415_69692500_69694306
ES.15636.13	chr17	+	3178	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	40	407	40	-407	multi-exon	FALSE	canonical	3	64	junction_1	68.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCCTGAGTGTTTTT	NA	False	NA	NA	False	TTTAAA	-42	NA	69690353	69697338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.14	chr17	+	3581	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	46	-2	46	2	multi-exon	FALSE	canonical	3	64	junction_1	68.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTATTTGTGTTAT	NA	False	NA	NA	False	AAAACA	-45	NA	69690359	69697747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.15	chr17	+	3963	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	47	-385	47	-64	multi-exon	FALSE	canonical	3	64	junction_1	68.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	69690360	69698130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.16	chr17	+	3504	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-462	1316	59	-867	multi-exon	FALSE	canonical	3	41	junction_1	80	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTATGTTTTCCAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	69690372	69696878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69691221_69692415_69692500_69694306
ES.15636.17	chr17	+	1891	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	63	1671	63	-1671	multi-exon	FALSE	canonical	3	64	junction_1	68.5	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTGACTTATGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	69690376	69696074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15636.18	chr17	+	4162	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-458	654	63	-205	multi-exon	FALSE	canonical	3	41	junction_1	80	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTCTTGATCATTCTT	NA	False	NA	NA	False	TATAAA	-17	NA	69690376	69697540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69691221_69692415_69692500_69694306
ES.15636.19	chr17	+	4209	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-298	447	223	2	multi-exon	FALSE	canonical	3	41	junction_1	80	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTATTTGTGTTAT	NA	False	NA	NA	False	AAAACA	-45	NA	69690536	69697747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69691221_69692415_69692500_69694306
ES.15636.2	chr17	+	2459	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-242	1526	-242	-1526	multi-exon	FALSE	canonical	3	85	junction_1	58	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGGTTTGTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	69689802	69696219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.20	chr17	+	3586	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	-84	856	-84	-407	multi-exon	FALSE	canonical	3	41	junction_1	80	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCCTGAGTGTTTTT	NA	False	NA	NA	False	TTTAAA	-42	NA	69690750	69697338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69691221_69692415_69692500_69694306
ES.15636.3	chr17	+	3982	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-237	-2	-237	2	multi-exon	FALSE	canonical	3	85	junction_1	58	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTATTTGTGTTAT	NA	False	NA	NA	False	AAAACA	-45	NA	69689807	69697747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.4	chr17	+	3401	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-209	551	-209	-551	multi-exon	FALSE	canonical	3	85	junction_1	58	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAACATCTGTTATTA	NA	False	NA	16	True	ATTAAA	-23	NA	69689835	69697194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.5	chr17	+	3544	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-209	408	-209	-408	multi-exon	FALSE	canonical	3	85	junction_1	58	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTTCCTGAGTGTTTT	NA	False	NA	NA	False	TTTAAA	-41	NA	69689835	69697337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.6	chr17	+	2963	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-84	864	-84	-864	multi-exon	FALSE	canonical	3	85	junction_1	58	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATGTTTTCCAAATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69689960	69696881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.7	chr17	+	2120	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-45	1668	-45	-1668	multi-exon	FALSE	canonical	3	85	junction_1	58	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTGACTTATGTCAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	69689999	69696077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.8	chr17	+	4225	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	-41	-441	-41	-8	multi-exon	FALSE	canonical	3	85	junction_1	58	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCTAAGCATAGGCTA	NA	False	NA	NA	False	AAGAAA	-5	NA	69690003	69698186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690265_69692415_69692500_69694306
ES.15636.9	chr17	+	3418	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	1	206	1	-206	multi-exon	FALSE	canonical	3	64	junction_1	68.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTTCTTGATCATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	69690314	69697539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_69690416_69692415_69692500_69694306
ES.15637.1	chr17	-	1106	1	Genic_Genomic	ENSMUSG00000096988.2	novel	NA	NA	NA	NA	21982	443	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTCTCCCAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	69724317	69723211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_69723200_69724300
ES.15638.1	chr17	+	1266	2	Antisense	novelGene_ENSMUSG00000096988.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACCTGTGTTTTGTCA	NA	False	NA	NA	False	AATATA	-15	NA	69730344	69736060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_69730494_69734943
ES.15639.1	chr17	+	2082	2	NNC	ENSMUSG00000091636.3	novel	2296	2	NA	NA	47094	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACGTATCCAGTATCCA	NA	False	NA	NA	False	AATAAA	-16	NA	69793922	69796203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_69793950_69794148
ES.1564.1	chr1	+	137	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAACAAAAAACAAAAC	1141	False	NA	NA	False	NA	NA	NA	151361159	151361296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151361200_151361300
ES.15640.1	chr17	-	182	1	Intergenic	novelGene_13036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	70136103	70135921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_70135900_70136100
ES.15641.1	chr17	+	199	1	Intergenic	novelGene_13037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTCTACAAGTTGGTTT	5883	False	NA	NA	False	NA	NA	NA	70906924	70907123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_70906900_70907100
ES.15642.1	chr17	-	219	1	Intergenic	novelGene_13038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCCTTGCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	71041164	71040945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71040900_71041200
ES.15643.1	chr17	+	182	1	Intergenic	novelGene_13039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAAGTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71046639	71046821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71046600_71046800
ES.15644.1	chr17	+	162	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	71053169	71053331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71053200_71053300
ES.15645.1	chr17	+	2471	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAATTCCCTAAGCGT	NA	False	NA	NA	False	NA	NA	NA	71058218	71060689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71058200_71060700
ES.15645.2	chr17	+	491	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71058363	71058854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71058400_71058900
ES.15646.1	chr17	+	204	1	Intergenic	novelGene_13040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCCCTCGCAGACAC	264	False	NA	NA	False	NA	NA	NA	71064368	71064572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71064400_71064600
ES.15647.1	chr17	+	1876	4	NNC	ENSMUSG00000003279.18	novel	3496	9	NA	NA	-48079	845	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.68178700572909	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	3883	False	NA	NA	False	NA	NA	NA	71067987	71095232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71068441_71072992_71073085_71093782_71094205_71094323
ES.15647.10	chr17	+	191	1	Intergenic	novelGene_13044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAACTACATGGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71085346	71085537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71085300_71085500
ES.15647.11	chr17	+	2081	4	NNC	ENSMUSG00000003279.18	novel	1738	3	NA	NA	-27612	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.44948974278318	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAATTGACTAA	2274	False	NA	NA	False	NA	NA	NA	71088454	71123714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71088496_71093782_71094205_71116182_71116275_71122188
ES.15647.12	chr17	+	1105	3	NNC	ENSMUSG00000003279.18	novel	7173	14	NA	NA	-27607	1068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.5	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGATGTCTTAGTTTC	2279	False	NA	NA	False	NA	NA	NA	71088459	71095455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71088496_71093782_71094626_71095229
ES.15647.13	chr17	+	1357	3	NNC	ENSMUSG00000003279.18	novel	7173	14	NA	NA	-27597	845	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	2289	False	NA	NA	False	NA	NA	NA	71088469	71095232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71088496_71093782_71094205_71094323
ES.15647.14	chr17	+	159	1	Intergenic	novelGene_13046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	3048	False	NA	NA	False	NA	NA	NA	71093419	71093578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71093400_71093600
ES.15647.2	chr17	+	1951	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	199454	-5	-48066	5	3prime_fragment	FALSE	canonical	2	6	junction_2	1.78535710713571	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAATTTCCTATTTGA	3896	False	NA	NA	False	AATAAA	-24	NA	71068000	71123093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188
ES.15647.3	chr17	+	4510	6	ISM	ENSMUSG00000003279.18	ENSMUST00000148486.8	5276	10	238948	-4	-47988	0	3prime_fragment	FALSE	canonical	2	6	junction_2	1.62480768092719	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCACGTGTGTTTACTGA	3974	False	NA	8	True	AATAAA	-22	NA	71068078	71128408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
ES.15647.4	chr17	+	2777	6	ISM	ENSMUSG00000003279.18	ENSMUST00000133717.9	2445	11	239114	-1220	-47903	-39	3prime_fragment	FALSE	canonical	2	6	junction_2	1.62480768092719	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTATCAGAGATGCTT	4059	False	NA	NA	False	NA	NA	NA	71068163	71126760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
ES.15647.5	chr17	+	2416	5	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	199622	-638	-47898	2	3prime_fragment	FALSE	canonical	2	6	junction_2	1.78535710713571	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACTAAAAAGTTTCCAAT	4064	False	NA	NA	False	AAGAAA	-6	NA	71068168	71123726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188
ES.15647.6	chr17	+	3820	4	NNC	ENSMUSG00000003279.18	novel	7173	14	NA	NA	-47839	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.85861230093008	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCACGTGTGTTTACTGA	4123	False	NA	8	True	AATAAA	-22	NA	71068227	71128408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71068414_71116182_71116275_71122188_71122342_71125019
ES.15647.7	chr17	+	869	2	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	204515	28460	-43005	241	internal_fragment	FALSE	canonical	3	6	junction_1	0	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAGCTGGGGAGAAA	2406	False	NA	NA	False	NA	NA	NA	71073061	71094628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71073085_71093782
ES.15647.8	chr17	+	167	1	Intergenic	novelGene_13041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGGTTTTAA	3133	False	NA	NA	False	NA	NA	NA	71073788	71073955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71073800_71074000
ES.15647.9	chr17	+	3727	1	Intergenic	novelGene_13043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTGCTCTTCCAGAG	6842	False	NA	NA	False	NA	NA	NA	71077497	71081224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71077500_71081200
ES.15648.1	chr17	-	2333	6	NNC	ENSMUSG00000117231.2	novel	2325	5	NA	NA	6	459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.87814388593306	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGACCAATGTCTGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	71112986	71072374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71073289_71073399_71073543_71082133_71082270_71106981_71107840_71108290_71108460_71112873
ES.15648.10	chr17	-	2544	3	NNC	ENSMUSG00000117231.2	novel	3157	3	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCACACTGCCTCTGTG	NA	False	NA	-12	True	NA	NA	NA	71112990	71105611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71107870_71108290_71108460_71112873
ES.15648.11	chr17	-	2990	3	FSM	ENSMUSG00000117231.2	ENSMUST00000233879.2	3157	3	23	144	23	-144	multi-exon	FALSE	canonical	0	0	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGATTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	71113031	71105764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71108460_71112006_71112144_71112873
ES.15648.3	chr17	-	1713	7	NNC	ENSMUSG00000117231.2	novel	2325	5	NA	NA	2	456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.72677996249965	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGATGACCAATGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	71112990	71072377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71073324_71081419_71081539_71082133_71082270_71086089_71086231_71086485_71086571_71108290_71108460_71112873
ES.15648.4	chr17	-	177	1	Intergenic	novelGene_13042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTAATGGT	NA	False	NA	NA	False	NA	NA	NA	71074960	71074783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71074800_71075000
ES.15648.5	chr17	-	177	1	Intergenic	novelGene_13045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71090132	71089955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71090000_71090100
ES.15648.6	chr17	-	752	4	NNC	ENSMUSG00000117231.2	novel	3157	3	NA	NA	-24	6375	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTACTGCTCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	71113016	71099245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71099526_71101583_71101729_71108290_71108460_71112858
ES.15648.7	chr17	-	1613	3	NNC	ENSMUSG00000117231.2	novel	3157	3	NA	NA	4772	6324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	71108220	71099296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71099526_71101583_71101729_71106981
ES.15648.8	chr17	-	175	1	Intergenic	novelGene_13047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	71104448	71104273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71104300_71104400
ES.15648.9	chr17	-	4590	1	NIC	ENSMUSG00000117231.2	novel	2325	5	NA	NA	3204	422	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACTGTTATTGGTATT	NA	False	NA	NA	False	AGTAAA	-21	NA	71109788	71105198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71105200_71109800
ES.15649.1	chr17	-	132	1	Intergenic	novelGene_13048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	71114131	71113999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71114000_71114100
ES.1565.1	chr1	+	152	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATAAATGTCACT	2239	False	NA	NA	False	NA	NA	NA	151365301	151365453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151365300_151365500
ES.15650.1	chr17	-	140	1	Intergenic	novelGene_13049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9893	False	NA	NA	False	NA	NA	NA	71117737	71117597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71117600_71117700
ES.15651.1	chr17	-	2767	1	Antisense	novelGene_ENSMUSG00000003279.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAGAGAGAGA	2201	False	NA	NA	False	NA	NA	NA	71125429	71122662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71122700_71125400
ES.15652.1	chr17	-	768	3	Antisense	novelGene_ENSMUSG00000003279.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAACTGTTTGGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	71130666	71125669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71125929_71126393_71126694_71130457
ES.15653.1	chr17	-	178	1	Intergenic	novelGene_13050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGACAGTTATACA	NA	False	NA	NA	False	NA	NA	NA	71131476	71131298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71131300_71131500
ES.15654.1	chr17	+	182	1	Intergenic	novelGene_13051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTACAGAGACGTGGA	NA	False	NA	NA	False	NA	NA	NA	71134748	71134930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71134700_71134900
ES.15655.1	chr17	+	585	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-59	-141	-59	141	multi-exon	FALSE	canonical	3	64	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTCTATCTTTTTTT	221	False	NA	137	True	AATACA	-13	NA	71141599	71143180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_71141798_71142793
ES.15655.2	chr17	+	6760	1	Genic_Genomic	ENSMUSG00000093622.2	novel	NA	NA	NA	NA	-2	5377	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCAATCCTAGATGAT	278	False	NA	NA	False	NA	NA	NA	71141656	71148416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_71141700_71148400
ES.15655.3	chr17	+	415	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	-2	-28	-2	28	multi-exon	FALSE	canonical	3	64	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATGTCATGCATGTAA	278	False	NA	24	True	AATAAA	-9	NA	71141656	71143067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_71141798_71142793
ES.15655.4	chr17	+	1329	1	Genic_Genomic	ENSMUSG00000093622.2	novel	NA	NA	NA	NA	85	33	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATGCATGTAACTTTG	365	False	NA	29	True	AATAAA	-14	NA	71141743	71143072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_71141700_71143100
ES.15655.5	chr17	+	5233	2	Intergenic	novelGene_13053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACACACAACAAT	2758	False	NA	NA	False	NA	NA	NA	71144136	71149533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71144842_71145005
ES.15656.1	chr17	-	812	1	Intergenic	novelGene_13052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71144144	71143332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71143300_71144100
ES.15657.1	chr17	-	176	1	Intergenic	novelGene_13054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	71145567	71145391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71145400_71145600
ES.15658.1	chr17	+	5365	1	Antisense	novelGene_ENSMUSG00000047407.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCAGGATCCGGCGAG	NA	False	NA	NA	False	AAAACA	-30	NA	71152006	71157371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71152000_71157400
ES.15658.2	chr17	+	6177	1	Antisense	novelGene_ENSMUSG00000047407.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAAAAGCAACTGTCA	NA	False	NA	NA	False	NA	NA	NA	71153131	71159308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71153100_71159300
ES.15659.1	chr17	-	1430	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	-38	-4	-38	-2	multi-exon	FALSE	canonical	3	296	junction_2	292	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGAGCATTTTCTTGA	NA	False	NA	82	True	AATAAA	-24	NA	71160579	71151201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71152268_71153166_71153394_71160442
ES.15659.10	chr17	-	1445	3	NIC	ENSMUSG00000047407.18	novel	1455	3	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	35.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGCAATGAAGAGCATT	NA	False	NA	75	True	AATAAA	-17	NA	71156832	71151208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71152236_71153166_71153394_71156641
ES.15659.11	chr17	-	6091	2	FSM	ENSMUSG00000047407.18	ENSMUST00000135007.3	1291	2	-4033	-767	4	-3	multi-exon	FALSE	canonical	3	880	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGCAATGAAGAGCATT	NA	False	NA	75	True	AATAAA	-17	NA	71158198	71151208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71152268_71153166
ES.15659.12	chr17	-	1990	3	NNC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	213	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	440	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTATTGCAATGAAGA	NA	False	NA	70	True	AATAAA	-12	NA	71157851	71151213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71152268_71153166_71153394_71157142
ES.15659.2	chr17	-	1470	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	-26	2	-2	-2	multi-exon	FALSE	canonical	3	41	junction_2	419.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGAGCATTTTCTTGA	NA	False	NA	82	True	AATAAA	-24	NA	71156811	71151201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71152268_71153166_71153394_71156634
ES.15659.3	chr17	-	2027	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	-400	4	127	2	multi-exon	FALSE	canonical	3	373	junction_2	253.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGAGCATTTTCTT	NA	False	NA	80	True	AATAAA	-22	NA	71158602	71151203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71152268_71153166_71153394_71157866
ES.15659.4	chr17	-	1392	3	NIC	ENSMUSG00000047407.18	novel	1388	3	NA	NA	52	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	148	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGAGCATTTTCTT	NA	False	NA	80	True	AATAAA	-22	NA	71160489	71151203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71152322_71153166_71153394_71160442
ES.15659.5	chr17	-	4680	2	ISM	ENSMUSG00000047407.18	ENSMUST00000186358.6	1455	3	1248	0	-7	0	3prime_fragment	FALSE	canonical	3	94	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71156816	71151205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71152236_71153166
ES.15659.6	chr17	-	5096	3	NIC	ENSMUSG00000047407.18	novel	1631	3	NA	NA	-65	0	intron_retention	FALSE	canonical	1	6	junction_2	437	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71158267	71151205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71152268_71153166_71156800_71157866
ES.15659.7	chr17	-	1468	3	FSM	ENSMUSG00000047407.18	ENSMUST00000186358.6	1455	3	-14	1	-14	-1	multi-exon	FALSE	canonical	3	94	junction_1	139.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATGAAGAGCATTTT	NA	False	NA	77	True	AATAAA	-19	NA	71158078	71151206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71152236_71153166_71153394_71157866
ES.15659.8	chr17	-	1457	3	NIC	ENSMUSG00000047407.18	novel	1446	3	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	428.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAATGAAGAGCATTT	NA	False	NA	76	True	AATAAA	-18	NA	71156811	71151207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71152268_71153166_71153394_71156641
ES.1566.1	chr1	+	2723	1	Antisense	novelGene_ENSMUSG00000103238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7663	False	NA	NA	False	NA	NA	NA	151370725	151373448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_151370700_151373400
ES.15660.1	chr17	-	177	1	Intergenic	novelGene_13055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCTAAGAATT	NA	False	NA	NA	False	NA	NA	NA	71162756	71162579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71162600_71162800
ES.15661.1	chr17	+	3875	1	Antisense	novelGene_ENSMUSG00000080468.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTAAGGGTCGAAGCC	NA	False	NA	NA	False	NA	NA	NA	71166550	71170425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71166600_71170400
ES.15662.1	chr17	-	2461	1	Intergenic	novelGene_13056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTACCCGATGATGC	NA	False	NA	NA	False	NA	NA	NA	71174554	71172093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71172100_71174600
ES.15663.1	chr17	+	504	1	FSM	ENSMUSG00000100865.3	ENSMUST00000184151.3	473	1	-5	-26	-5	26	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCTAGCATGGAATAATT	237	False	NA	NA	False	AATAAA	-41	NA	71182829	71183333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_71182800_71183300
ES.15664.1	chr17	+	2212	2	Antisense	novelGene_ENSMUSG00000097154.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	1712	False	NA	NA	False	NA	NA	NA	71185669	71188875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71187742_71188735
ES.15665.1	chr17	-	4833	1	Genic_Genomic	ENSMUSG00000097154.3	novel	NA	NA	NA	NA	-811	2435	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATCCATCTGCTCTTGGG	NA	False	NA	NA	False	AAAACA	-4	NA	71183741	71178908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_71178900_71183700
ES.15665.2	chr17	-	1061	3	NNC	ENSMUSG00000097154.3	novel	1796	3	NA	NA	6	-2332	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACCAGCATGGTTGCT	NA	False	NA	NA	False	AATATA	-18	NA	71231985	71183678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71184526_71186892_71187002_71231880
ES.15665.3	chr17	-	3492	1	Intergenic	novelGene_13057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71195127	71191635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71191600_71195100
ES.15665.4	chr17	-	1846	1	FSM	ENSMUSG00000117121.2	ENSMUST00000233300.2	1881	1	35	0	35	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTATTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	71199869	71198023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71198000_71199900
ES.15665.5	chr17	-	183	1	Intergenic	novelGene_13058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATATACAAATAAG	NA	False	NA	NA	False	NA	NA	NA	71213423	71213240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71213200_71213400
ES.15666.1	chr17	+	177	1	Intergenic	novelGene_13059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71235639	71235816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71235600_71235800
ES.15667.1	chr17	-	1778	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	374	-9	14	9	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTATGGCCATTAGTGT	3418	False	NA	NA	False	NA	NA	NA	71297511	71280118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ES.15667.10	chr17	-	200	1	Intergenic	novelGene_13060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTGCACATCCACTTA	NA	False	NA	NA	False	NA	NA	NA	71286941	71286741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71286700_71286900
ES.15667.11	chr17	-	176	1	Intergenic	novelGene_13061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8564	False	NA	NA	False	NA	NA	NA	71292365	71292189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71292200_71292400
ES.15667.2	chr17	-	1280	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	68	795	68	98	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGAGCGATAGTGTGG	3112	False	NA	14	True	AATAAA	-29	NA	71297817	71280922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ES.15667.3	chr17	-	2119	5	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	15	63	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	1069.93606701522	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGATGATGCTGACT	3419	False	NA	-21	True	AATAAA	-13	NA	71297510	71280957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71281492_71282453_71282616_71284042_71284242_71288336_71289518_71297467
ES.15667.4	chr17	-	2366	3	NIC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	14	63	intron_retention	FALSE	canonical	3	1981	junction_2	192.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGATGATGCTGACT	3418	False	NA	-21	True	AATAAA	-13	NA	71297511	71280957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71281492_71282453_71284242_71297467
ES.15667.5	chr17	-	1202	5	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	0	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1089.48413825076	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGATGATGCTGACT	3404	False	NA	-21	True	AATAAA	-13	NA	71297525	71280957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71281492_71282453_71282616_71284042_71284242_71292533_71292783_71297467
ES.15667.6	chr17	-	931	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	15	63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1032.1984090065	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGATGATGCTGACT	3419	False	NA	-21	True	AATAAA	-13	NA	71297510	71280957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71281492_71282453_71282616_71284042_71284235_71297467
ES.15667.7	chr17	-	1735	4	NNC	ENSMUSG00000034868.10	novel	2143	4	NA	NA	-3881	61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1031.73327733264	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGATGATGCTGA	NA	False	NA	-23	True	AATAAA	-11	NA	71289408	71280959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71281492_71282453_71282616_71284042_71284242_71288566
ES.15667.8	chr17	-	1185	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	61	897	61	-4	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGATTTCTGGTTTTGC	3105	False	NA	-38	True	AATAAA	-33	NA	71297824	71281024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ES.15667.9	chr17	-	291	2	FSM	ENSMUSG00000034868.10	ENSMUST00000131820.2	369	2	10	68	10	-68	multi-exon	FALSE	canonical	3	1981	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCATGTGTGGATCAT	3414	False	NA	NA	False	NA	NA	NA	71297515	71283998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71284242_71297467
ES.15668.1	chr17	+	3097	1	Antisense	novelGene_ENSMUSG00000024048.16_AS_novelGene_ENSMUSG00000117098.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTCTCCGCGAAGCTCC	NA	False	NA	NA	False	NA	NA	NA	71306031	71309128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71306000_71309100
ES.15669.1	chr17	-	1472	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	324	141	-43	-141	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGATTCCTCCTAAGT	2251	False	NA	NA	False	ATTAAA	-16	NA	71309225	71300791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ES.15669.2	chr17	-	1156	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	298	483	-69	148	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTCTCCCTCCAGG	2225	False	NA	NA	False	ATTAAA	-24	NA	71309251	71301133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ES.15669.3	chr17	-	1350	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	-32	619	-32	12	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCACTTGACTTTTAG	1895	False	NA	0	True	ATTAAA	-33	NA	71309581	71301269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ES.15669.5	chr17	-	6593	2	ISM	ENSMUSG00000024048.16	ENSMUST00000126529.2	1335	3	-46	0	-24	0	intron_retention	FALSE	canonical	3	3222	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	2270	False	NA	-19	True	ATTAAA	-14	NA	71309206	71301288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71301780_71303104
ES.15669.6	chr17	-	935	4	NNC	ENSMUSG00000024048.16	novel	1937	4	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1388.00920586124	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTAGTTGTTTAGC	2296	False	NA	22	True	ATTAAA	-10	NA	71309180	71301292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71301780_71303104_71303267_71303691_71303900_71309102
ES.1567.1	chr1	-	3260	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-94	-6	-94	5	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTACTCCTTTG	NA	False	NA	0	True	CATAAA	-25	NA	151376800	151345150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.10	chr1	-	3079	6	NIC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-12	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	216.048698214083	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAGTTATTAGATGTG	NA	False	NA	-10	True	CATAAA	-15	NA	151376718	151345160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151376469
ES.1567.11	chr1	-	3372	9	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	262.018964008333	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAGTTATTAGATGTG	NA	False	NA	-10	True	CATAAA	-15	NA	151376559	151345160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151358876_151359105_151359481_151359617_151376469
ES.1567.12	chr1	-	3122	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-63	101	-63	-101	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGCAGAAAGTTATTT	NA	False	NA	-1	True	ATTAAA	-34	NA	151376769	151345257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.13	chr1	-	3163	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	27	-105	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATCTAAGCAGAAAGTT	NA	False	NA	-5	True	ATTAAA	-30	NA	151376679	151345261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
ES.1567.14	chr1	-	3005	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	35	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	206.764291458226	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTATCTAAGCAGAAA	NA	False	NA	-8	True	ATTAAA	-27	NA	151376671	151345264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352099_151352626_151352784_151354287_151354377_151376469
ES.1567.16	chr1	-	4153	6	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	3	-108	intron_retention	TRUE	non_canonical	0	0	junction_1	221.757164484036	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTATCTAAGCAGAAA	NA	False	NA	-8	True	ATTAAA	-27	NA	151376559	151345264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347841_151348074_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.17	chr1	-	2898	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	1	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.780813022902	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTTATCTAAGCAGA	NA	False	NA	-10	True	ATTAAA	-25	NA	151376561	151345266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349089_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.18	chr1	-	3922	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	1	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	206.574441787942	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGTTATTGAAATTTT	NA	False	NA	-21	True	ATTAAA	-14	NA	151376561	151345277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347841_151348074_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.20	chr1	-	2780	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	1	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.049419660245	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGGTTATTGAAATT	NA	False	NA	-23	True	ATTAAA	-12	NA	151376561	151345279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151346040_151346151_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.21	chr1	-	2871	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	19	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	207.426024296749	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGGTTATTGAAATT	NA	False	NA	-23	True	ATTAAA	-12	NA	151376526	151345279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376455
ES.1567.22	chr1	-	2204	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	-16	972	-16	744	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGCACTTTAGCCTT	NA	False	NA	-14	True	ATTAAA	-19	NA	151376722	151346128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.24	chr1	-	3368	6	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-56	742	intron_retention	FALSE	non_canonical	0	0	junction_1	221.757164484036	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTGCACTTTAGCC	NA	False	NA	-16	True	ATTAAA	-17	NA	151376640	151346130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347841_151348074_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.25	chr1	-	2175	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	1	741	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATTTTGCACTTTAGC	NA	False	NA	-17	True	ATTAAA	-16	NA	151376561	151346131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
ES.1567.26	chr1	-	2215	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-33	603	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTTACAGGTTTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	151376739	151346269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
ES.1567.27	chr1	-	1901	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	144	1115	0	601	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCATTTACAGGTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	151376562	151346271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.28	chr1	-	1208	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	126	1826	4	-78	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGGATATGTTCAGT	NA	False	NA	NA	False	ATTAAA	-27	NA	151376580	151346982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.29	chr1	-	1199	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	1	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.780813022902	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACCTGGGATATGTTCA	NA	False	NA	NA	False	ATTAAA	-25	NA	151376561	151346984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351878_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.3	chr1	-	4451	6	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_1	221.757164484036	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTAGATGTGTACTC	NA	False	NA	-5	True	CATAAA	-20	NA	151376751	151345155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347856_151348092_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.30	chr1	-	209	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGGATGATAAACTTCAT	NA	False	NA	NA	False	NA	NA	NA	151361793	151361584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151361600_151361800
ES.1567.31	chr1	-	1002	1	Genic_Genomic	ENSMUSG00000026484.14	novel	NA	NA	NA	NA	-31	-23084	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGGTCTTGGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	151376737	151375735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_151375700_151376700
ES.1567.4	chr1	-	3025	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.780813022902	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTTATTAGATGTGTA	NA	False	NA	-8	True	CATAAA	-17	NA	151376561	151345158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351878_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.5	chr1	-	2935	7	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.780813022902	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTTATTAGATGTGT	NA	False	NA	-9	True	CATAAA	-16	NA	151376577	151345159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349003_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ES.1567.6	chr1	-	2544	4	NIC	ENSMUSG00000026484.14	novel	1106	6	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	245.259046724071	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTTATTAGATGTGT	NA	False	NA	-9	True	CATAAA	-16	NA	151376559	151345159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_151347169_151347388_151347561_151348822_151349096_151376469
ES.1567.8	chr1	-	3194	8	FSM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	3	4	3	-3	multi-exon	FALSE	canonical	0	0	junction_6	248.196597519805	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTTATTAGATGTGT	NA	False	NA	-9	True	CATAAA	-16	NA	151376559	151345159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151363022_151363207_151376469
ES.1567.9	chr1	-	3326	8	NNC	ENSMUSG00000026484.14	novel	3160	7	NA	NA	-35	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAGTTATTAGATGTG	NA	False	NA	-10	True	CATAAA	-15	NA	151376741	151345160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
ES.15670.1	chr17	-	187	1	Intergenic	novelGene_13062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTATTTCCA	NA	False	NA	NA	False	NA	NA	NA	71318753	71318566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71318600_71318800
ES.15671.1	chr17	+	1052	5	ISM	ENSMUSG00000024049.16	ENSMUST00000179759.3	5316	37	97742	1	-3602	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTGTGTCTCTCTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	71424296	71433850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71424453_71427640_71427678_71428120_71428144_71429551_71429608_71433070
ES.15672.1	chr17	+	3261	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-23	14	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCAGTTGGGATCGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	71490527	71554324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.10	chr17	+	4937	16	ISM	ENSMUSG00000024052.18	ENSMUST00000126681.8	4167	20	24631	-1573	-2126	-2	3prime_fragment	FALSE	canonical	3	15	junction_3	6.1478090044792	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATTGGGCTCCTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	71536301	71556810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.11	chr17	+	4720	15	NNC	ENSMUSG00000024052.18	novel	5640	20	NA	NA	-1061	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.64497331277187	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	71537366	71556813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550293_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.12	chr17	+	4855	12	NIC	ENSMUSG00000024052.18	novel	5640	20	NA	NA	2396	-1	intron_retention	FALSE	canonical	3	20	junction_1	5.57295713599786	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCATTGGGCTCCTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	71540823	71556811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.13	chr17	+	4083	11	ISM	ENSMUSG00000024052.18	ENSMUST00000126681.8	4167	20	33930	-1575	-56	0	3prime_fragment	FALSE	canonical	3	24	junction_6	5.26212884676915	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGGCTCCTTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	71545600	71556812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.14	chr17	+	2189	2	NNC	ENSMUSG00000024052.18	novel	5640	20	NA	NA	1614	5132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAACCATTAAGAAT	2551	False	NA	NA	False	GGGGCT	-40	NA	71554639	71561944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71556809_71561924
ES.15672.2	chr17	+	5748	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGGGCTCCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	71490529	71556813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.3	chr17	+	1734	9	NIC	ENSMUSG00000024052.18	novel	1586	8	NA	NA	-3	-426	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.085211401702	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTAATGAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	71490547	71544654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380
ES.15672.4	chr17	+	4154	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGCTATTTTCCAGATT	NA	False	NA	NA	False	NA	NA	NA	71490548	71555238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ES.15672.5	chr17	+	1586	8	FSM	ENSMUSG00000024052.18	ENSMUST00000156570.8	1586	8	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_7	9.55328771274314	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTAGTGCTTTCTTTC	NA	False	NA	NA	False	TTTAAA	-9	NA	71490551	71539302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71539072
ES.15672.7	chr17	+	1906	1	Intergenic	novelGene_13063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACATGTGTACTTCTGGA	NA	False	NA	NA	False	TTTAAA	-32	NA	71492187	71494093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71492200_71494100
ES.15672.8	chr17	+	2765	1	Intergenic	novelGene_13064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71500733	71503498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71500700_71503500
ES.15672.9	chr17	+	2574	4	ISM	ENSMUSG00000024052.18	ENSMUST00000126681.8	4167	20	23907	13135	-2850	-12	internal_fragment	FALSE	canonical	3	15	junction_3	6.48074069840786	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAACAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71535577	71542102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71536411_71537266_71537391_71538177_71538515_71540822
ES.15673.1	chr17	-	1170	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12187	-844	-64	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCTTTTCTGTATTTG	NA	False	NA	-6	True	AATAAA	-16	NA	71563405	71559167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
ES.15673.2	chr17	-	1331	4	NNC	ENSMUSG00000024053.12	novel	758	5	NA	NA	-65	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.59966329107444	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTTCCTTTTCTGTAT	NA	False	NA	-9	True	AATAAA	-13	NA	71563406	71559170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71560089_71562113_71562243_71562974_71563008_71563155
ES.15674.1	chr17	+	2048	1	Antisense	novelGene_ENSMUSG00000024054.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCAGCTGGGGGTGGTGG	8621	False	NA	NA	False	NA	NA	NA	71666156	71668204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71666200_71668200
ES.15675.1	chr17	+	7574	6	Antisense	novelGene_ENSMUSG00000024054.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTTAAACTGAATTAAC	5929	False	NA	NA	False	NA	NA	NA	71679211	71696171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71684073_71685141_71685262_71686539_71686694_71687122_71687204_71688326_71688453_71693939
ES.15676.1	chr17	+	2685	1	Antisense	novelGene_ENSMUSG00000024054.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAGGAAAGAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	71712180	71714865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71712200_71714900
ES.15677.1	chr17	-	2357	1	Genic_Genomic	ENSMUSG00000024054.15	novel	NA	NA	NA	NA	3501	1340	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGGTGATTCTACTGA	NA	False	NA	NA	False	NA	NA	NA	71652500	71650143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_71650100_71652500
ES.15677.11	chr17	-	7016	47	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-109	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	40.4823469660421	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782447	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.12	chr17	-	7141	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.8485589516183	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782514	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665429_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.13	chr17	-	7201	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	40.057552530235	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782489	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696851_71697417_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.14	chr17	-	7227	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	39.95520352618	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782516	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677344_71677899_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.15	chr17	-	7116	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	39.9313240238522	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782489	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738303_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.16	chr17	-	6621	47	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	1761	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.3610645981163	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71770880	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71659175_71659224_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756
ES.15677.17	chr17	-	10409	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_23	46.3276949475034	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782373	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71701940_71702086_71702193_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.2	chr17	-	7244	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-192	0	-192	0	multi-exon	FALSE	canonical	3	108	junction_42	32.1184571856639	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782530	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.21	chr17	-	2336	4	ISM	ENSMUSG00000024054.15	ENSMUST00000138193.8	1485	5	1926	0	-1184	0	3prime_fragment	FALSE	canonical	3	207	junction_2	24.1154629969146	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71661565	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380
ES.15677.27	chr17	-	7041	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	39.9313240238522	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGTGGTTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	71782340	71651490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736646_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.30	chr17	-	7300	49	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-150	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	45.8746026322481	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71782488	71651491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71702086_71702193_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.31	chr17	-	7184	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	39.9062731697395	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71782489	71651491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676813_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.32	chr17	-	7206	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.5456531272391	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71782489	71651491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665127_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687116_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.33	chr17	-	5591	36	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-34936	-8	intron_retention	FALSE	canonical	0	0	junction_23	50.9250429553083	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71736655	71651491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71702086_71702193_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456
ES.15677.34	chr17	-	1204	4	NNC	ENSMUSG00000024054.15	novel	1485	5	NA	NA	-38	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.538929038015	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAATTAGTGGTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	71660419	71651491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71656018_71656584_71656744_71660380
ES.15677.38	chr17	-	8938	42	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-178	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4724932789299	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAAAATTAGTGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	71782516	71651493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71654584_71668522_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.39	chr17	-	3875	25	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-5374	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.209413276159	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAAAATTAGTGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	71707093	71651493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71652361_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053
ES.15677.41	chr17	-	3940	25	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-205	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	59.9510071966175	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAAAATTAGTGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	71701924	71651493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71679454_71679598_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711
ES.15677.44	chr17	-	6931	47	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	13	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	40.4500906039489	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCCCAAAAAAATTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	71782310	71651498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.45	chr17	-	6893	47	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	46.9112956518507	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATACGCCGTGTGTGTC	NA	False	NA	NA	False	TATAAA	-27	NA	71782489	71651652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698342_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.46	chr17	-	6815	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	16	221	1	-221	multi-exon	FALSE	canonical	3	108	junction_42	32.1184571856639	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTTAGGGATATGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	71782322	71651704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.47	chr17	-	6760	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-151	443	-151	-443	multi-exon	FALSE	canonical	3	108	junction_42	32.1184571856639	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGTCTGGGAATTTAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	71782489	71651926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.48	chr17	-	6609	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-137	580	-137	-580	multi-exon	FALSE	canonical	3	108	junction_42	32.1184571856639	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTTTTTTATTGCCTT	NA	False	NA	NA	False	NA	NA	NA	71782475	71652063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.49	chr17	-	6021	2	ISM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	96039	27726	-2274	3768	internal_fragment	FALSE	canonical	3	156	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTCTGTTAGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	71686299	71679209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71684074_71685142
ES.15677.50	chr17	-	7388	24	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	-640	intron_retention	FALSE	canonical	3	108	junction_18	15.5943375889879	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACTAGACTCAAAACACA	NA	False	NA	NA	False	NA	NA	NA	71782489	71701539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.51	chr17	-	3752	25	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	-650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	32.7956636699969	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATCCTCATAACTAGAC	NA	False	NA	NA	False	NA	NA	NA	71782489	71701549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762712_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.52	chr17	-	3600	24	ISM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	-175	53868	-175	-4452	5prime_fragment	FALSE	canonical	3	108	junction_18	15.5943375889879	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACTGATTATATTTTC	NA	False	NA	NA	False	AGTAAA	-30	NA	71782513	71705351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.53	chr17	-	3239	18	NNC	ENSMUSG00000024054.15	novel	381	4	NA	NA	-151	-27147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4596119979475	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTCTTTCTTAGATTT	NA	False	NA	NA	False	NA	NA	NA	71782489	71728046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71728696_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.54	chr17	-	4575	1	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	33814	21324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTAATCCAAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	71738827	71734252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71734300_71738800
ES.15677.55	chr17	-	2658	1	FSM	ENSMUSG00000091831.7	ENSMUST00000171504.6	1616	1	-344	-698	-344	698	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACATAGCTTGCACAGG	NA	False	NA	NA	False	NA	NA	NA	71767257	71764599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71764600_71767300
ES.15677.56	chr17	-	7062	2	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-148	-10539	intron_retention	FALSE	canonical	3	151	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTCCTGGAACTCAC	NA	False	NA	NA	False	NA	NA	NA	71782486	71766115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71772665_71781973
ES.15677.57	chr17	-	2788	5	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	5	11585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.2710407897991	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACATCTATCCATCCAT	NA	False	NA	NA	False	NA	NA	NA	71782318	71767948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71768018_71768534_71770076_71770161_71770919_71772588_71772665_71781973
ES.15677.58	chr17	-	3448	5	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	11557	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	74.2710407897991	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71782489	71767976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71769999_71770045_71770123_71770161_71770919_71772588_71772665_71781973
ES.15677.59	chr17	-	5351	2	Genic_Genomic	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-779	11550	multi-exon	FALSE	canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71773420	71767983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_71770076_71770161
ES.15677.6	chr17	-	4502	31	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-20904	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	44.3416533546306	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71722623	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694056_71696746_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595
ES.15677.8	chr17	-	10419	47	NIC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-151	0	intron_retention	FALSE	canonical	3	108	junction_41	32.4570677609215	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782489	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15677.9	chr17	-	7209	48	NNC	ENSMUSG00000024054.15	novel	7052	48	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	40.0495844777471	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782505	71651483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667031_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ES.15678.1	chr17	+	166	1	Intergenic	novelGene_13065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	2577	False	NA	NA	False	NA	NA	NA	71789793	71789959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71789800_71790000
ES.15679.1	chr17	+	170	1	Antisense	novelGene_ENSMUSG00000024056.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAGAAAAGAAACGAGA	NA	False	NA	NA	False	NA	NA	NA	71820422	71820592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_71820400_71820600
ES.1568.1	chr1	-	172	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGGTGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	151402311	151402139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151402100_151402300
ES.15680.1	chr17	+	175	1	Intergenic	novelGene_13066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71821991	71822166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71822000_71822200
ES.15681.1	chr17	-	5067	16	NIC	ENSMUSG00000024056.11	novel	2201	17	NA	NA	-1	2	intron_retention	TRUE	canonical	3	248	junction_9	50.3229569878401	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCTCCCATTTCTGTG	NA	False	NA	-9	True	AATAAA	-21	NA	71833803	71803092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ES.15681.2	chr17	-	2334	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	-133	0	-133	0	multi-exon	FALSE	canonical	3	248	junction_10	48.8427003246135	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCCCTCCCATTTCTG	NA	False	NA	-11	True	AATAAA	-19	NA	71833985	71803094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ES.15681.4	chr17	-	2795	18	NNC	ENSMUSG00000024056.11	novel	2201	17	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	137.505457582788	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71833795	71803096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71819928_71820592_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827918_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ES.15681.5	chr17	-	2136	17	NNC	ENSMUSG00000024056.11	novel	2201	17	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.3301838954531	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71833795	71803096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71803349_71806261_71806365_71807266_71807398_71808509_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ES.15681.6	chr17	-	4333	9	ISM	ENSMUSG00000024056.11	ENSMUST00000233552.2	1454	10	-2444	-1	-2444	1	intron_retention	FALSE	canonical	3	311	junction_6	44.8871849752243	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71822547	71803096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387
ES.15681.7	chr17	-	4782	4	NIC	ENSMUSG00000024056.11	novel	1454	10	NA	NA	7053	1	intron_retention	FALSE	canonical	3	353	junction_2	33.9050963065371	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCCCCTCCCATTTC	NA	False	NA	-13	True	AATAAA	-17	NA	71813050	71803096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71806365_71807266_71807398_71808503_71808597_71811760
ES.15681.8	chr17	-	2107	17	NNC	ENSMUSG00000024056.11	novel	2201	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	121.795166160238	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCCCCTCCCATTT	NA	False	NA	-14	True	AATAAA	-16	NA	71833805	71803097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819383_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828099_71830576_71830655_71832627_71832738_71833705
ES.15681.9	chr17	-	4462	17	NIC	ENSMUSG00000024056.11	novel	2201	17	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	8	junction_14	93.1181205512654	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCCCTCCCATT	NA	False	NA	-15	True	AATAAA	-15	NA	71833825	71803098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71830439_71830576_71830655_71832627_71832738_71833705
ES.15682.1	chr17	+	255	1	Intergenic	novelGene_13067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTTAAATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	71842809	71843064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71842800_71843100
ES.15683.1	chr17	-	179	1	Intergenic	novelGene_13068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTTTTC	NA	False	NA	0	True	NA	NA	NA	71870465	71870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71870300_71870500
ES.15684.1	chr17	+	181	1	Intergenic	novelGene_13069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTATAATATTT	NA	False	NA	NA	False	NA	NA	NA	71896599	71896780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_71896600_71896800
ES.15685.1	chr17	-	1341	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-520	-40	-18	40	multi-exon	FALSE	canonical	3	25	junction_2	30	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTTTTTTACTGTTC	NA	False	NA	-8	True	GATAAA	-15	NA	71905768	71895511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_71895980_71897482_71897518_71904930
ES.15685.10	chr17	-	1379	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.2685791225499	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905740	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71895996_71897482_71897518_71898852_71898943_71904930
ES.15685.11	chr17	-	2722	2	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	6071	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTATGTATTTTTTA	NA	False	NA	-16	True	AATAAA	-16	NA	71899177	71895552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71897730_71898632
ES.15685.12	chr17	-	1288	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTATGTATTTTTTA	NA	False	NA	-16	True	AATAAA	-16	NA	71905740	71895552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71895996_71897482_71897518_71904930
ES.15685.2	chr17	-	1210	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-11	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.8807492274273	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTTTTTTACTGTTC	NA	False	NA	-8	True	GATAAA	-15	NA	71905761	71895511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71895980_71897482_71897518_71898852_71898943_71905144
ES.15685.3	chr17	-	2565	2	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	1	3	intron_retention	FALSE	canonical	3	23	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATTTTTTAAGAT	NA	False	NA	-12	True	AATAAA	-20	NA	71905740	71895548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71897518_71905144
ES.15685.4	chr17	-	1322	4	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.8807492274273	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905699	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71895980_71897482_71897518_71898852_71898943_71904930
ES.15685.6	chr17	-	1090	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905771	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71895980_71897482_71897518_71905144
ES.15685.7	chr17	-	2824	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	43	0	intron_retention	FALSE	non_canonical	0	0	junction_2	17.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905698	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_71897518_71898852_71898943_71904930
ES.15685.8	chr17	-	6554	1	NIC	ENSMUSG00000085492.8	novel	2516	6	NA	NA	3143	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71902105	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71895600_71902100
ES.15685.9	chr17	-	2781	2	NIC	ENSMUSG00000085492.8	novel	781	3	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905745	71895551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_71897518_71904930
ES.15686.1	chr17	+	3837	19	NIC	ENSMUSG00000041057.11	novel	2410	19	NA	NA	-97	84	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	368.991489245758	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAGAATTCACAGGGAAA	NA	False	NA	102	True	NA	NA	NA	71922792	71966110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71922950_71923063_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.10	chr17	+	3997	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1341	junction_7	119.716445586018	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGTCTCGTGGTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	71923219	71966025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71960518_71964335_71964386_71964470
ES.15686.11	chr17	+	3524	17	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	10	1	10	-1	intron_retention	FALSE	canonical	3	1341	junction_7	118.534739106306	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGTCTCGTGGTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	71923219	71966025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335
ES.15686.14	chr17	+	3523	19	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	493.967188518968	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGCGTGTCTCGTGGTG	NA	False	NA	14	True	AATAAA	-14	NA	71923221	71966022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.15	chr17	+	2311	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	12	-67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	379.105412114902	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGAGTGTCCAATATA	NA	False	NA	33	True	AATAAA	-38	NA	71923221	71964906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955845_71957008_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.17	chr17	+	6502	17	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	14	-87	intron_retention	FALSE	non_canonical	0	0	junction_15	390.644494513554	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTTCTGCAATGTAC	NA	False	NA	13	True	AATAAA	-18	NA	71923223	71964886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71963051_71963220_71964386_71964470
ES.15686.19	chr17	+	3477	17	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	15	-5	intron_retention	FALSE	canonical	0	0	junction_4	390.647894329088	1115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCGCGTGTCTCGTGGT	NA	False	NA	13	True	AATAAA	-13	NA	71923224	71966021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71939037_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335
ES.15686.2	chr17	+	2672	19	NIC	ENSMUSG00000041057.11	novel	2410	19	NA	NA	-97	-28	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	368.991489245758	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCTGGTATGATTGGT	NA	False	NA	72	True	AATATA	-20	NA	71922792	71964945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71922950_71923063_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.20	chr17	+	3348	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	388.210296585498	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923224	71966026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.21	chr17	+	2280	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	15	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	380.751569642815	1110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGACACACTTTCTGCA	NA	False	NA	7	True	AATAAA	-12	NA	71923224	71964880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943560_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.22	chr17	+	3907	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	16	-87	intron_retention	FALSE	canonical	2	3	junction_10	520.431972019398	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTTCTGCAATGTAC	NA	False	NA	13	True	AATAAA	-18	NA	71923225	71964886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71960518_71964335_71964386_71964470
ES.15686.23	chr17	+	3237	16	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	23	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	402.55861684977	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71923232	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71964335_71964386_71964470
ES.15686.24	chr17	+	4533	16	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	23	-93	intron_retention	FALSE	canonical	3	1341	junction_7	110.136077447654	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGACACACTTTCTGCA	NA	False	NA	7	True	AATAAA	-12	NA	71923232	71964880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.25	chr17	+	3551	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	379.785114984795	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTCTCGTGGTGTATAT	NA	False	NA	19	True	AATAAA	-19	NA	71923232	71966027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948158_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.26	chr17	+	5678	16	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	23	-1	intron_retention	FALSE	canonical	3	1341	junction_7	110.136077447654	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGTCTCGTGGTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	71923232	71966025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.27	chr17	+	2373	17	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	24	1138	24	-85	intron_retention	FALSE	canonical	3	1341	junction_7	118.534739106306	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTCTGCAATGTACTG	NA	False	NA	15	True	AATAAA	-20	NA	71923233	71964888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335
ES.15686.29	chr17	+	3436	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	379.815398613881	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71923235	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937137_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.3	chr17	+	3737	19	NNC	ENSMUSG00000041057.11	novel	2410	19	NA	NA	-81	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	490.813412159403	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71922808	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71922950_71923063_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960524_71964335_71964386_71964470
ES.15686.30	chr17	+	2292	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	26	-85	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_16	371.824194793601	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTCTGCAATGTACTG	NA	False	NA	15	True	AATAAA	-20	NA	71923235	71964888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960524_71964335_71964386_71964470
ES.15686.31	chr17	+	3338	18	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	27	-87	intron_retention	FALSE	canonical	2	3	junction_10	508.287905773597	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTTCTGCAATGTAC	NA	False	NA	13	True	AATAAA	-18	NA	71923236	71964886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.33	chr17	+	3670	19	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	30	161	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	493.967188518968	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATCTCACTCCAGTG	NA	False	NA	NA	False	NA	NA	NA	71923239	71966187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.34	chr17	+	3498	19	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	492.020538063751	1115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71923240	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71932884_71932970_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.35	chr17	+	3429	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	380.23580372709	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71923246	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948259_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.36	chr17	+	4568	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	37	-2	intron_retention	FALSE	canonical	3	1341	junction_7	119.88640456699	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGTGTCTCGTGGTGTA	NA	False	NA	16	True	AATAAA	-16	NA	71923246	71966024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.39	chr17	+	3469	20	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	38	128382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	484.605559683805	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAAGCAACCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	71923247	72094408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470_71966021_72026111_72026157_72094390
ES.15686.40	chr17	+	2784	13	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	39	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	433.624805819757	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	False	NA	12	True	AATAAA	-12	NA	71923248	71966020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.41	chr17	+	2437	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	39	-93	intron_retention	FALSE	canonical	1	3	junction_11	598.787847082044	1110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGACACACTTTCTGCA	NA	False	NA	7	True	AATAAA	-12	NA	71923248	71964880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964337
ES.15686.42	chr17	+	4459	18	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	39	-7	intron_retention	FALSE	canonical	2	3	junction_10	508.287905773597	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGCGCGTGTCTCGTG	NA	False	NA	11	True	AATAAA	-11	NA	71923248	71966019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.44	chr17	+	3542	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	39	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	512.000141922558	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGCGCGTGTCTCGTG	NA	False	NA	11	True	AATAAA	-11	NA	71923248	71966019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947213_71947316_71948158_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.47	chr17	+	1715	12	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	41	7	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	456.604083705127	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAATGTGATTTTCAT	NA	False	NA	NA	False	AATAAA	-23	NA	71923250	71950421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71950142
ES.15686.48	chr17	+	3319	15	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	13539	7	-6801	-7	3prime_fragment	FALSE	canonical	3	1341	junction_4	116.099622949343	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGCGCGTGTCTCGTG	NA	False	NA	11	True	AATAAA	-11	NA	71936748	71966019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.49	chr17	+	1546	14	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	-6299	-93	combination_of_known_splicesites	FALSE	canonical	2	51	junction_6	403.0522306001	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGACACACTTTCTGCA	NA	False	NA	7	True	AATAAA	-12	NA	71937250	71964880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.50	chr17	+	1803	15	Fusion	ENSMUSG00000093289.3_ENSMUSG00000041057.11	novel	722	8	NA	NA	1	-74	multi-exon	FALSE	canonical	0	0	junction_1	404.986375432204	1109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACTGACATGAGTGTC	NA	False	NA	26	True	AATAAA	-31	NA	71938276	71964899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_71938447_71939037_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.51	chr17	+	2486	11	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	22093	8	1753	-8	3prime_fragment	FALSE	canonical	3	1368	junction_2	116.618394775438	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCAGCGCGTGTCTCGT	NA	False	NA	10	True	AATAAA	-10	NA	71945302	71966018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.52	chr17	+	3714	8	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	-272	-66	intron_retention	FALSE	canonical	3	1436	junction_6	91.8814675635552	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAGTGTCCAATATAT	NA	False	NA	34	True	AATAAA	-39	NA	71946968	71964907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.53	chr17	+	3630	7	FSM	ENSMUSG00000041057.11	ENSMUST00000234424.2	745	7	-1648	-1237	-1648	-2	multi-exon	FALSE	canonical	3	1436	junction_5	99.2404487427715	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGTGTCTCGTGGTGTA	NA	False	NA	16	True	AATAAA	-16	NA	71954108	71966024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.54	chr17	+	167	1	Intergenic	novelGene_13074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAAAATCTAG	NA	False	NA	NA	False	NA	NA	NA	72010222	72010389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_72010200_72010400
ES.15686.55	chr17	+	4185	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	14.2289220330362	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTGTGTCTTTTACC	NA	False	NA	4	True	AATAAA	-17	NA	72089588	72165346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.56	chr17	+	4397	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	16.6831918075915	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCGGTGCTGTGTCTTT	NA	False	NA	0	True	AATAAA	-13	NA	72089605	72165342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72090075_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.57	chr17	+	4075	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	18.3443535215185	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGGTGCTGTGTCTTTTA	NA	False	NA	2	True	AATAAA	-15	NA	72089623	72165344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72163222
ES.15686.58	chr17	+	7522	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	26	1	intron_retention	FALSE	canonical	1	20	junction_1	13.9510807130209	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTGTGTCTTTTACC	NA	False	NA	4	True	AATAAA	-17	NA	72089637	72165346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72144754_72156886_72156960_72163222
ES.15686.59	chr17	+	4413	17	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1489740593401	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCGGTGCTGTGTCTTTT	NA	False	NA	1	True	AATAAA	-14	NA	72089640	72165343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72090131_72090360_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135701_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.6	chr17	+	3271	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	-1	-93	intron_retention	FALSE	canonical	3	1341	junction_7	112.702872634197	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGACACACTTTCTGCA	NA	False	NA	7	True	AATAAA	-12	NA	71923208	71964880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.60	chr17	+	4347	17	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1749186801335	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGCTGTGTCTTTTAC	NA	False	NA	3	True	AATAAA	-16	NA	72089653	72165345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72090131_72090360_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.61	chr17	+	3645	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	47	339	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	14.2289220330362	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCACTTTATTGCCTT	NA	False	NA	NA	False	AATATA	-17	NA	72089658	72164876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.62	chr17	+	2064	14	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.8004154555631	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTGTGTGTGTCTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	72089665	72157158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
ES.15686.63	chr17	+	2409	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	15.578635291675	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGCCCACTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	72089666	72157152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72090075_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
ES.15686.64	chr17	+	2174	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	57	-5	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	12.538308644848	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGCCCACTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	72089668	72157152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
ES.15686.65	chr17	+	4156	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.0804146239599	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGCTGTGTCTTTTAC	NA	False	NA	3	True	AATAAA	-16	NA	72089671	72165345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135701_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.66	chr17	+	2024	14	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	63	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.1570896234328	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGCCCACTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	72089674	72157152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72138199_72138335_72141178_72141303_72144688_72144754_72156886
ES.15686.67	chr17	+	2025	14	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0510790458371	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGCCCACTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	72089675	72157152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089841_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
ES.15686.7	chr17	+	3317	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	51	junction_9	375.487162729966	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGTCTCGTGGTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	71923209	71966025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15686.70	chr17	+	6646	15	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	69	0	intron_retention	FALSE	canonical	1	20	junction_1	14.6365840221253	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGCTGTGTCTTTTAC	NA	False	NA	3	True	AATAAA	-16	NA	72089680	72165345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.71	chr17	+	3240	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	70	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	21.5647861106944	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCGGTGCTGTGTCTTT	NA	False	NA	0	True	AATAAA	-13	NA	72089681	72165342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222_72163349_72164055
ES.15686.72	chr17	+	2488	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	78	-21	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	14.2289220330362	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72089689	72163750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.74	chr17	+	4192	17	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	81	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.8094553749056	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCGGTGCTGTGTCTTT	NA	False	NA	0	True	AATAAA	-13	NA	72089692	72165342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72151403_72151519_72156886_72156960_72163222
ES.15686.75	chr17	+	3989	16	NNC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	82	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6022725805505	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTGTGTCTTTTACC	NA	False	NA	4	True	AATAAA	-17	NA	72089693	72165346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72089842_72096953_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ES.15686.76	chr17	+	2819	4	NNC	ENSMUSG00000024059.11	novel	1154	6	NA	NA	-12422	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2593655651606	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTACGTGCTAACATTA	NA	False	NA	NA	False	ATTAAA	-21	NA	72105457	72110952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72106736_72106910_72107888_72108769_72108932_72110550
ES.15686.77	chr17	+	6264	5	NNC	ENSMUSG00000024059.11	novel	2537	17	NA	NA	1088	-3	intron_retention	FALSE	canonical	0	0	junction_4	25.5	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCGGTGCTGTGTCTTT	NA	False	NA	0	True	AATAAA	-13	NA	72136589	72165342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_72141303_72144688_72144754_72156886_72156960_72163222_72163349_72164055
ES.15686.9	chr17	+	4406	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	10	0	intron_retention	FALSE	canonical	3	1341	junction_7	112.702872634197	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923219	71966026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ES.15687.1	chr17	-	2002	1	Antisense	novelGene_ENSMUSG00000041057.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCAACTTAAGAGTACC	NA	False	NA	NA	False	NA	NA	NA	71933487	71931485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71931500_71933500
ES.15688.1	chr17	-	176	1	Intergenic	novelGene_13070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAACTAACTCT	NA	False	NA	NA	False	NA	NA	NA	71935996	71935820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71935800_71936000
ES.15689.1	chr17	-	140	1	Intergenic	novelGene_13071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTGAAAAAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71942151	71942011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71942000_71942200
ES.1569.1	chr1	+	181	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACTTCAAG	NA	False	NA	NA	False	NA	NA	NA	151415353	151415534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151415400_151415500
ES.15690.1	chr17	-	224	1	Intergenic	novelGene_13072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCAAACTTA	NA	False	NA	NA	False	AAAAAG	-11	NA	71946183	71945959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71946000_71946200
ES.15691.1	chr17	-	3897	5	Antisense	novelGene_ENSMUSG00000041057.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGATTTTGCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	71960481	71952201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71955853_71957009_71957041_71957559_71957622_71959770_71959890_71960447
ES.15691.2	chr17	-	5550	3	Antisense	novelGene_ENSMUSG00000041057.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71960481	71952224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71957622_71959770_71959890_71960447
ES.15692.1	chr17	-	2458	2	Antisense	novelGene_ENSMUSG00000041057.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTCAGCTATTGGATG	NA	False	NA	NA	False	NA	NA	NA	71963646	71961018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_71963056_71963225
ES.15693.1	chr17	-	174	1	Intergenic	novelGene_13073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	71995328	71995154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_71995200_71995300
ES.15694.1	chr17	-	5704	3	Antisense	novelGene_ENSMUSG00000024059.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAAACCTCCCCCAA	NA	False	NA	NA	False	AATGAA	-41	NA	72089558	72078023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_72082979_72088033_72088465_72089240
ES.15695.1	chr17	-	4344	1	Intergenic	novelGene_13075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	72154476	72150132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_72150100_72154500
ES.15696.1	chr17	-	1571	2	ISM	ENSMUSG00000055471.8	ENSMUST00000086639.6	5454	29	729575	-276	729575	276	3prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTAAAAAAAAAAAATT	NA	False	NA	NA	False	AAGAAA	-13	NA	72181247	72175690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_72177127_72181112
ES.15696.2	chr17	-	4049	28	NNC	ENSMUSG00000055471.8	novel	5454	29	NA	NA	80794	-4742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.733295921230494	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATTCCATGTGATT	7457	False	NA	NA	False	NA	NA	NA	72830028	72180708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_72181204_72181936_72182072_72187789_72187892_72192349_72192443_72197959_72198058_72201070_72201201_72202706_72202772_72202871_72202963_72204799_72204987_72206164_72206270_72207654_72207808_72208292_72208392_72209615_72209799_72211234_72211380_72212042_72212175_72218476_72218628_72228847_72229011_72256804_72256934_72257171_72257267_72274480_72274651_72291625_72291727_72292418_72292551_72299053_72299186_72358734_72358863_72512791_72512994_72667552_72667718_72687039_72687157_72829877
ES.15696.3	chr17	-	2783	2	Intergenic	novelGene_13076	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAGCGATCCTA	NA	False	NA	NA	False	NA	NA	NA	72651812	72648972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_72651338_72651394
ES.15697.1	chr17	+	1560	3	Antisense	novelGene_ENSMUSG00000055471.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTGTGTGTGCATT	NA	False	NA	NA	False	AATACA	-13	NA	72830319	72840710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_72830388_72839064_72839148_72839301
ES.15698.1	chr17	-	4281	1	Genic_Genomic	ENSMUSG00000055471.8	novel	NA	NA	NA	NA	-37	-395405	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTCTTTCTTAATGA	6496	False	NA	NA	False	ATTAAA	-20	NA	72911659	72907378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_72907400_72911700
ES.15698.2	chr17	-	3159	1	Genic_Genomic	ENSMUSG00000055471.8	novel	NA	NA	NA	NA	-35	-396525	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTCTCACTAAGGACA	6498	False	NA	NA	False	AATAAA	-19	NA	72911657	72908498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_72908500_72911700
ES.15699.1	chr17	-	189	1	Intergenic	novelGene_13077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTCTGCGTGTG	2956	False	NA	NA	False	NA	NA	NA	73105698	73105509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_73105500_73105700
ES.157.10	chr1	-	4765	5	FSM	ENSMUSG00000042686.6	ENSMUST00000038382.5	4809	5	37	7	37	-7	multi-exon	FALSE	canonical	2	13	junction_1	2.12132034355964	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGGAAGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	17168076	17065168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.11	chr1	-	2957	4	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11940	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.68331255192114	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGGAAGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	17086383	17065168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17067265_17067687_17067784_17074114_17074759_17086262
ES.157.12	chr1	-	4082	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-10	-111	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.28010988928052	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCCCTACTGGTGGGT	NA	False	NA	NA	False	TTTAAA	-27	NA	17168123	17065272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066792_17067114_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.13	chr1	-	3262	6	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-8	-1505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.29285308902091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATAGTGATCTGATGG	NA	False	NA	NA	False	AATAAA	-16	NA	17168121	17066666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.14	chr1	-	7736	4	ISM	ENSMUSG00000042686.6	ENSMUST00000038382.5	4809	5	-8	3412	-8	-3412	5prime_fragment	FALSE	canonical	3	13	junction_2	2.05480466765633	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGTTAAGCTGAGGGC	NA	False	NA	NA	False	AAAAAG	-30	NA	17168121	17068573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.15	chr1	-	2777	2	ISM	ENSMUSG00000042686.6	ENSMUST00000038382.5	4809	5	-8	95015	-8	-95015	5prime_fragment	FALSE	canonical	3	16	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTTCATAACAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	17168121	17160176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_17162282_17167449
ES.157.2	chr1	-	4360	6	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	34	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.18331399842719	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168079	17065161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167814
ES.157.3	chr1	-	4217	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.28010988928052	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168145	17065161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067114_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.4	chr1	-	4347	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.84754619472471	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168124	17065161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067265_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.5	chr1	-	4197	7	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.28010988928052	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168121	17065161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066786_17067114_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.6	chr1	-	4770	6	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.29285308902091	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	17168124	17065161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17167449
ES.157.9	chr1	-	4404	8	NNC	ENSMUSG00000042686.6	novel	4809	5	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.20827189231021	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGGAAGTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	17168119	17065168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_17066741_17066790_17067265_17067687_17067784_17074114_17074759_17086262_17086382_17161521_17162282_17165640_17165710_17167449
ES.1570.1	chr1	+	6533	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-26722	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6363416244727	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATTTATCCGTG	NA	False	NA	15	True	AATAAA	-23	NA	151420214	151597694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151420283_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.10	chr1	+	4033	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-291	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	52.8977160881917	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTACCAATGTAGAAAT	NA	False	NA	15	True	NA	NA	NA	151446645	151595096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446812_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.11	chr1	+	4064	15	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-104	16	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATTGTTTGATCATTC	NA	False	NA	28	True	NA	NA	NA	151446832	151595109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.12	chr1	+	3890	15	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-98	-152	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCTAGAAGAAAAGAGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	151446838	151594941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.13	chr1	+	4234	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-283	2580	-96	17	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTGTTTGATCATTCA	NA	False	NA	29	True	NA	NA	NA	151446840	151595110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.14	chr1	+	5910	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-279	900	-92	-900	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCATTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	151446844	151596790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.15	chr1	+	4071	16	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.3935842407468	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGACTTTACCAATGTA	NA	False	NA	10	True	NA	NA	NA	151446870	151595091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151591624_151591688_151592979
ES.1570.16	chr1	+	3989	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6363416244727	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTACCAATGTAGA	NA	False	NA	12	True	NA	NA	NA	151446873	151595093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446999_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.18	chr1	+	5650	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-213	1094	-26	-1094	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGGCACAGTGTATGA	NA	False	NA	NA	False	NA	NA	NA	151446910	151596596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.19	chr1	+	2637	13	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-21	-9240	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	57.9230212341249	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGCACCTCCACACAG	NA	False	NA	NA	False	AATAAA	-23	NA	151446915	151585853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847
ES.1570.2	chr1	+	3942	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-714	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6363416244727	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATTGTTTGATCATTC	NA	False	NA	28	True	NA	NA	NA	151446222	151595109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446285_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.21	chr1	+	3061	12	ISM	ENSMUSG00000026483.14	ENSMUST00000097541.10	4010	15	-274	8980	-8	-8980	5prime_fragment	FALSE	canonical	3	183	junction_3	15.8291498025344	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCATCTGATTAAGTTC	NA	False	NA	NA	False	AAAAAG	-3	NA	151446928	151586113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847
ES.1570.22	chr1	+	6661	14	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	38	-10	intron_retention	FALSE	canonical	0	0	junction_3	55.6580855330751	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTAACATTCACAGTTG	NA	False	NA	1	True	AATAAA	-9	NA	151446974	151597680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520634_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.23	chr1	+	3869	13	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-46	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	57.3243088827845	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAGACTTTACCAATGT	NA	False	NA	9	True	NA	NA	NA	151447077	151595090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151591410_151591523_151592979
ES.1570.24	chr1	+	2866	12	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-7	-9008	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.4814021001498	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGAAACATTAGA	NA	False	NA	NA	False	NA	NA	NA	151447116	151586085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565248_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847
ES.1570.26	chr1	+	3324	12	ISM	ENSMUSG00000026483.14	ENSMUST00000097541.10	4010	15	-51	8494	28	-8494	5prime_fragment	FALSE	canonical	3	183	junction_3	15.8291498025344	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTGGCACATCCAGTC	NA	False	NA	NA	False	TATAAA	-19	NA	151447151	151586599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847
ES.1570.27	chr1	+	3008	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	45	3478	-34	-881	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAATGGTGAAGCCAG	NA	False	NA	NA	False	TATAAA	-20	NA	151447168	151594212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.28	chr1	+	3883	14	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.2307692307692	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTACCAATGTAGAA	NA	False	NA	13	True	NA	NA	NA	151447168	151595094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525036_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.29	chr1	+	6043	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	56	432	-23	-432	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACTCTGCCAAGTGCC	NA	False	NA	NA	False	AGTAAA	-23	NA	151447179	151597258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.3	chr1	+	6513	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-707	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6363416244727	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACAGTTGCTCATTT	NA	False	NA	8	True	AATAAA	-16	NA	151446229	151597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446285_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.30	chr1	+	3448	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	53.6363416244727	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCACAGTTGCTCATT	NA	False	NA	7	True	AATAAA	-15	NA	151447199	151597686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979_151593940_151596942
ES.1570.31	chr1	+	6426	14	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	5	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	55.6580855330751	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCACAGTTGCTCAT	NA	False	NA	6	True	AATAAA	-14	NA	151447207	151597685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520641_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.32	chr1	+	3497	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	87	2947	8	-350	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAGATGGGGCAAGAG	NA	False	NA	NA	False	NA	NA	NA	151447210	151594743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.33	chr1	+	4669	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	91	1771	12	826	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGCTGCCCATAAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	151447214	151595919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.34	chr1	+	5974	13	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	12	8	intron_retention	FALSE	canonical	3	182	junction_11	16.7373501155018	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAATGTAGAAATTGTTT	NA	False	NA	20	True	NA	NA	NA	151447214	151595101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.35	chr1	+	6480	14	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	55.6245869607695	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCACAGTTGCTCAT	NA	False	NA	6	True	AATAAA	-14	NA	151447214	151597685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579660_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.36	chr1	+	5280	7	NNC	ENSMUSG00000026483.14	novel	1296	6	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	74.4253914258359	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCACAGTTGCTCATTTA	NA	False	NA	9	True	AATAAA	-17	NA	151447214	151597688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565303_151593105
ES.1570.37	chr1	+	3677	13	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	57.4491925288965	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTACCAATGTAGA	NA	False	NA	12	True	NA	NA	NA	151447215	151595093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.38	chr1	+	6454	14	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.6424553756993	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACAGTTGCTCATTT	NA	False	NA	8	True	AATAAA	-16	NA	151447218	151597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565248_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.39	chr1	+	4632	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAACTACTATTGA	NA	False	NA	NA	False	AATAAA	-10	NA	151447531	151452163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151447500_151452200
ES.1570.4	chr1	+	3928	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-398	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.3900262030202	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTTACCAATGTAGAAA	NA	False	NA	14	True	NA	NA	NA	151446538	151595095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446601_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.40	chr1	+	3593	12	ISM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	70052	2598	-35742	-1	3prime_fragment	FALSE	canonical	3	182	junction_10	17.4464943552926	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGACTTTACCAATGTAG	NA	False	NA	11	True	NA	NA	NA	151517175	151595092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.41	chr1	+	176	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTGCAACC	NA	False	NA	NA	False	NA	NA	NA	151557782	151557958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151557800_151558000
ES.1570.42	chr1	+	5158	6	NNC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	26644	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.7763683625829	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	7318	False	NA	11	True	AATAAA	-19	NA	151579561	151597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151591624_151591688_151592979
ES.1570.43	chr1	+	4709	1	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	40060	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCACAGTTGCTCATT	NA	False	NA	7	True	AATAAA	-15	NA	151592977	151597686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151593000_151597700
ES.1570.5	chr1	+	3971	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-386	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6363416244727	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCAATGTAGAAATTGT	NA	False	NA	18	True	NA	NA	NA	151446550	151595099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446652_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.6	chr1	+	7039	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-504	-4	-317	4	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATTTATCCGTG	NA	False	NA	15	True	AATAAA	-23	NA	151446619	151597694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.7	chr1	+	4274	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	-491	2748	-304	-151	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAGAAAAGAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	151446632	151594942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.8	chr1	+	6635	15	NNC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	-302	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	52.8977160881917	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACAGTTGCTCATTT	NA	False	NA	8	True	AATAAA	-16	NA	151446634	151597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151446812_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.1570.9	chr1	+	6834	15	NIC	ENSMUSG00000026483.14	novel	6531	14	NA	NA	-293	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151446643	151597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ES.15700.1	chr17	+	1241	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	191	1688	191	673	multi-exon	FALSE	canonical	3	244	junction_1	49	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	936	False	NA	13	True	AATAAA	-13	NA	73143638	73156502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73143787_73153273_73153439_73155574
ES.15700.2	chr17	+	2178	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	192	750	192	8	multi-exon	FALSE	canonical	3	244	junction_1	49	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTACTTATTTTCC	937	False	NA	16	True	AATAAA	-25	NA	73143639	73157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73143787_73153273_73153439_73155574
ES.15700.4	chr17	+	1547	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	-58	930	-58	673	multi-exon	FALSE	canonical	3	101	junction_1	120.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTCCTCTGTTACT	1547	False	NA	13	True	AATAAA	-13	NA	73144249	73156502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73144704_73153273_73153439_73155574
ES.15700.5	chr17	+	1637	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	-261	-672	-38	672	multi-exon	FALSE	canonical	3	29	junction_1	156.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGGTCCTCTGTTAC	1567	False	NA	12	True	AATAAA	-12	NA	73144269	73156501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73144815_73153273_73153439_73155574
ES.15700.6	chr17	+	2451	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	-26	-6	-26	6	multi-exon	FALSE	canonical	3	101	junction_1	120.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGCTACTTATTTT	1579	False	NA	14	True	AATAAA	-23	NA	73144281	73157438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73144704_73153273_73153439_73155574
ES.15700.7	chr17	+	2280	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	25	-1601	25	-2	multi-exon	FALSE	canonical	3	29	junction_1	156.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGGTACAGAACTGCTA	1853	False	NA	6	True	AATAAA	-15	NA	73144555	73157430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73144815_73153273_73153439_73155574
ES.15700.8	chr17	+	5070	3	NNC	ENSMUSG00000039770.7	novel	3120	3	NA	NA	1264	672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGGTCCTCTGTTAC	6487	False	NA	12	True	AATAAA	-12	NA	73149189	73156501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73153168_73153273_73153439_73155574
ES.15701.1	chr17	+	3066	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	2	1	2	-1	multi-exon	FALSE	canonical	2	4	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTTGGGTTCCTTC	NA	False	NA	9	True	AATAAA	-18	NA	73225301	73248941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73225574_73228182_73228286_73246250
ES.15701.2	chr17	+	4089	3	NNC	ENSMUSG00000024063.14	novel	3069	3	NA	NA	2	33314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGATCTGAAGATATTT	NA	False	NA	NA	False	TTTAAA	-35	NA	73225301	73282256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73225574_73228182_73228286_73278542
ES.15702.1	chr17	-	4345	3	Intergenic	novelGene_13078	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTCTGTTGCTTGAT	NA	False	NA	NA	False	AATATA	-40	NA	73314424	73309399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_73311446_73311501_73313739_73314362
ES.15702.2	chr17	-	2271	2	Intergenic	novelGene_13079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	ACTAAA	-27	NA	73314409	73311514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_73313739_73314362
ES.15702.3	chr17	-	266	2	Intergenic	novelGene_13080	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTGGAGTCTTCTGC	NA	False	NA	NA	False	NA	NA	NA	73314439	73313549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_73313739_73314362
ES.15703.1	chr17	+	4469	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73414965	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.11	chr17	+	3126	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	67	-1242	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.4659125092029	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATTTGTTCTTACCTA	NA	False	NA	NA	False	AATAAA	-22	NA	73415055	73549121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.12	chr17	+	4193	5	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	69	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.6467039149484	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTTGTGATTCTGT	NA	False	NA	12	True	AATAAA	-22	NA	73415057	73550359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415141_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.13	chr17	+	4769	7	NNC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	78	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.3256872688674	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCAAAAGCTGTTG	NA	False	NA	3	True	AATAAA	-13	NA	73415066	73550350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73415173_73459814_73460208_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.14	chr17	+	218	1	Intergenic	novelGene_13081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACTGTTTGTGGAGGAT	NA	False	NA	NA	False	NA	NA	NA	73422780	73422998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_73422800_73423000
ES.15703.15	chr17	+	4858	1	Intergenic	novelGene_13082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAACCATTTACA	NA	False	NA	NA	False	NA	NA	NA	73455831	73460689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_73455800_73460700
ES.15703.16	chr17	+	3994	1	Intergenic	novelGene_13083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAACAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	73487498	73491492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_73487500_73491500
ES.15703.17	chr17	+	3653	1	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	35566	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73546710	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73546700_73550400
ES.15703.2	chr17	+	4488	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	-21	0	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73414967	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.3	chr17	+	4251	5	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.6467039149484	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415014	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415152_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.4	chr17	+	4409	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.4659125092029	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415014	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.5	chr17	+	3490	7	NNC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	47	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.8365229799607	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAAGCTGTTGTGATTC	NA	False	NA	9	True	AATAAA	-19	NA	73415035	73550356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712_73549437_73550327
ES.15703.6	chr17	+	4499	7	NNC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.8871688614314	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415035	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73415152_73418286_73418387_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.7	chr17	+	3176	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	52	1239	52	-1239	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTTCTTACCTACAC	NA	False	NA	NA	False	AATAAA	-25	NA	73415040	73549124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15703.8	chr17	+	4646	7	NNC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.8401008253967	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415041	73550363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73511032_73511286_73546712
ES.15703.9	chr17	+	3152	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	53	-1241	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTGTTCTTACCTAC	NA	False	NA	NA	False	AATAAA	-23	NA	73415041	73549122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ES.15704.1	chr17	-	202	1	Antisense	novelGene_ENSMUSG00000117292.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73566424	73566222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_73566200_73566400
ES.15705.1	chr17	+	3649	6	FSM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	9	1	9	-1	multi-exon	FALSE	canonical	1	2	junction_5	1.35646599662505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTGGTGACTGAGCA	NA	False	NA	2	True	AATACA	-19	NA	74111844	74139088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74112465_74123225_74123403_74127472_74127571_74134144_74134558_74135040_74135206_74136912
ES.15705.2	chr17	+	3283	1	FSM	ENSMUSG00000024065.9	ENSMUST00000233212.2	3528	1	716	-471	9	471	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAAAGATTACCC	NA	False	NA	NA	False	NA	NA	NA	74111844	74115127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74111800_74115100
ES.15706.1	chr17	-	2953	3	NNC	ENSMUSG00000038541.9	novel	1605	5	NA	NA	26402	2063	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTGAGTGGTGTCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	74328509	74321886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74324146_74324204_74324768_74328378
ES.15707.1	chr17	+	173	1	Intergenic	novelGene_13084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATAGATGT	NA	False	NA	NA	False	NA	NA	NA	74352858	74353031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74352900_74353000
ES.15708.1	chr17	+	225	1	Intergenic	novelGene_13085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTGTACAGGGAGAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	74447813	74448038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74447800_74448000
ES.15709.1	chr17	+	160	1	Intergenic	novelGene_13086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74467288	74467448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74467300_74467400
ES.1571.1	chr1	-	3091	1	Antisense	novelGene_ENSMUSG00000026483.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCTTAGTAACGG	NA	False	NA	NA	False	NA	NA	NA	151447494	151444403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_151444400_151447500
ES.15710.1	chr17	-	4942	1	FSM	ENSMUSG00000117113.2	ENSMUST00000233013.2	3732	1	985	-2195	985	2195	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGATGAGAGATATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	74496509	74491567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74491600_74496500
ES.15710.2	chr17	-	1123	1	FSM	ENSMUSG00000117113.2	ENSMUST00000233013.2	3732	1	2612	-3	2612	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGAATGAGATTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	74494882	74493759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74493800_74494900
ES.15711.1	chr17	+	210	1	Antisense	novelGene_ENSMUSG00000117113.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGGAATGGGTGTGA	7666	False	NA	NA	False	NA	NA	NA	74497291	74497501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_74497300_74497500
ES.15712.1	chr17	+	178	1	Intergenic	novelGene_13088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTC	NA	False	NA	NA	False	NA	NA	NA	74515496	74515674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74515500_74515700
ES.15713.1	chr17	+	184	1	Intergenic	novelGene_13089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	74593654	74593838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74593700_74593800
ES.15714.1	chr17	+	181	1	Intergenic	novelGene_13090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74596403	74596584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74596400_74596600
ES.15715.1	chr17	-	5046	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-196	-1687	-196	1687	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGAGGCAAGCTTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	74602054	74504343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.11	chr17	-	1650	8	ISM	ENSMUSG00000058704.10	ENSMUST00000232987.2	1041	9	399	-365	-234	-4	3prime_fragment	FALSE	canonical	2	11	junction_2	97.4017558405203	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602092	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_74508321_74509255_74509361_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.14	chr17	-	1619	10	NNC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-185	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	89.3656657907399	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602043	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601798_74601856
ES.15715.15	chr17	-	1761	9	NNC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-253	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	94.772672089585	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602111	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524114_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.16	chr17	-	1436	9	NNC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	93.5517904692369	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74601837	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562256_74565418_74565501_74601686
ES.15715.17	chr17	-	1332	8	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	92.7388257199668	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74601840	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.18	chr17	-	1463	10	NNC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-201	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	89.0631624948286	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602059	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74601995
ES.15715.19	chr17	-	1906	4	NNC	ENSMUSG00000058704.10	novel	1210	7	NA	NA	9155	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.360846378652	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74528341	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74527237
ES.15715.20	chr17	-	1554	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-46	-4	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	74602562	74507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ES.15715.21	chr17	-	1132	7	FSM	ENSMUSG00000058704.10	ENSMUST00000232989.2	1210	7	72	6	61	-6	multi-exon	FALSE	canonical	2	6	junction_4	104.977378515564	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATAGTCTGATTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	74601724	74507702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74562222_74562292_74565418_74565501_74601686
ES.15715.22	chr17	-	1640	11	NNC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-178	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	129.0835388421	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAAAATAGTCTGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	74602036	74507705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74528517_74528551_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601803_74601861
ES.15715.23	chr17	-	1581	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-196	1778	-196	-96	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATCTGTATTAGAATA	NA	False	NA	NA	False	AATAAA	-16	NA	74602054	74507808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.24	chr17	-	4876	1	Intergenic	novelGene_13087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGTTATAGATTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	74515557	74510681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74510700_74515600
ES.15715.25	chr17	-	3610	1	Antisense	novelGene_ENSMUSG00000117262.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	7050	False	NA	NA	False	AGTAAA	-13	NA	74521034	74517424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74517400_74521000
ES.15715.3	chr17	-	3816	10	NIC	ENSMUSG00000058704.10	novel	3163	9	NA	NA	-1	637	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTATTTCCAGCAACC	NA	False	NA	NA	False	AATACA	-19	NA	74602517	74505393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ES.15715.4	chr17	-	3809	7	FSM	ENSMUSG00000058704.10	ENSMUST00000232989.2	1210	7	-296	-2303	-234	637	multi-exon	FALSE	canonical	2	6	junction_4	104.977378515564	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTATTTCCAGCAACC	NA	False	NA	NA	False	AATACA	-19	NA	74602092	74505393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74562222_74562292_74565418_74565501_74601686
ES.15715.5	chr17	-	3389	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-244	18	-244	-18	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTGTTATATTGCACA	NA	False	NA	NA	False	ATTAAA	-17	NA	74602102	74506048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.6	chr17	-	3174	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-252	241	-252	-241	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTAGGCCCTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	74602110	74506271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.7	chr17	-	2719	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-254	698	-254	-698	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTCTGAATTGACAA	NA	False	NA	NA	False	TATAAA	-29	NA	74602112	74506728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ES.15715.8	chr17	-	4272	5	NNC	ENSMUSG00000058704.10	novel	1210	7	NA	NA	606	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	123.018291322876	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74536890	74507696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74533567
ES.15715.9	chr17	-	2839	2	ISM	ENSMUSG00000058704.10	ENSMUST00000233495.2	732	4	26026	-414	26026	0	3prime_fragment	FALSE	canonical	3	329	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74511470	74507696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_74508321_74509255
ES.15716.1	chr17	+	173	1	Intergenic	novelGene_13092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACAATTCAA	NA	False	NA	NA	False	NA	NA	NA	74617993	74618166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74618000_74618200
ES.15717.1	chr17	+	135	1	Intergenic	novelGene_13093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	6081	False	NA	NA	False	NA	NA	NA	74642221	74642356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74642200_74642400
ES.15718.1	chr17	+	5063	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-279	-2718	-279	89	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGAATAGAAGGTTCTG	9562	False	NA	122	True	AATAAA	-21	NA	74645702	74698199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.10	chr17	+	4223	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-246	-7	intron_retention	FALSE	canonical	3	114	junction_1	37.8992817287552	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTTTTGTTCAAGG	9595	False	NA	9	True	AATAAA	-13	NA	74645735	74695474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.11	chr17	+	3618	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-246	-1306	-246	1306	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCTCTTGTTAAAGAT	9595	False	NA	NA	False	GATAAA	-35	NA	74645735	74696787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.14	chr17	+	3492	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-271	-1475	-221	1301	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCCTTGCTCTTGTTA	9620	False	NA	NA	False	GATAAA	-30	NA	74645760	74696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.15	chr17	+	2213	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-189	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	66.470912602598	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTCAAGGCCTTC	9652	False	NA	14	True	AATAAA	-18	NA	74645792	74695479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.16	chr17	+	4799	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-188	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	62.718276620314	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9653	False	NA	33	True	AATAAA	-24	NA	74645793	74698110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.17	chr17	+	4832	17	NNC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-168	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	65.8130638627317	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATAGTCTTCGAT	9673	False	NA	30	True	AATAAA	-21	NA	74645813	74698107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695215
ES.15718.19	chr17	+	4782	16	NIC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-133	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	63.8339512589761	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATAGTCTTCGAT	9708	False	NA	30	True	AATAAA	-21	NA	74645848	74698107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.2	chr17	+	3240	12	ISM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-271	12849	-271	-7	intron_retention	FALSE	canonical	3	146	junction_1	34.8035810829625	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAGAAAGAAAAAAAAA	9570	False	NA	NA	False	NA	NA	NA	74645710	74682632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117
ES.15718.20	chr17	+	2168	17	NNC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-132	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	65.8130638627317	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTCAAGGCCTTC	9709	False	NA	14	True	AATAAA	-18	NA	74645849	74695479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695215
ES.15718.21	chr17	+	2075	15	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-131	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	69.2938507740914	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTCAAGGCCTTC	9710	False	NA	14	True	AATAAA	-18	NA	74645850	74695479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.22	chr17	+	4739	16	NIC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-130	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	65.1236772098546	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9711	False	NA	31	True	AATAAA	-22	NA	74645851	74698108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658947_74659032_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.24	chr17	+	2113	17	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-123	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	63.4458430474369	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	9718	False	NA	13	True	AATAAA	-17	NA	74645858	74695478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675884_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.25	chr17	+	6729	16	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-123	-2	intron_retention	FALSE	canonical	1	2	junction_3	64.8569708409718	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9718	False	NA	31	True	AATAAA	-22	NA	74645858	74698108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666250_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.27	chr17	+	7902	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-122	-2	intron_retention	FALSE	canonical	3	114	junction_1	38.4299651603046	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	9719	False	NA	31	True	AATAAA	-22	NA	74645859	74698108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.29	chr17	+	4437	13	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-121	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	72.251249508611	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTATAGTCTTCGA	9720	False	NA	29	True	AATAAA	-20	NA	74645860	74698106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676221_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.3	chr17	+	5130	15	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-269	-3	intron_retention	FALSE	canonical	3	114	junction_1	38.361399072186	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	9572	False	NA	13	True	AATAAA	-17	NA	74645712	74695478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.34	chr17	+	3571	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-118	-1149	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	64.0070829413954	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCATAGTTTTTGTTG	9723	False	NA	NA	False	CATAAA	-40	NA	74645863	74696961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.38	chr17	+	2039	1	Genic_Genomic	ENSMUSG00000024068.9	novel	NA	NA	NA	NA	-118	-32812	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGAAATAAAGCTGGGG	9723	False	NA	NA	False	NA	NA	NA	74645863	74647902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_74645900_74647900
ES.15718.39	chr17	+	5198	14	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-115	-3	intron_retention	FALSE	canonical	1	2	junction_3	68.1290109291006	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	9726	False	NA	13	True	AATAAA	-17	NA	74645866	74695478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666253_74666345_74674242_74674431_74675822_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.4	chr17	+	3811	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-265	-1480	-265	-1149	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCATAGTTTTTGTTG	9576	False	NA	NA	False	CATAAA	-40	NA	74645716	74696961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.40	chr17	+	4816	17	NNC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-111	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	65.1487480693221	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTATAGTCTTCGA	9730	False	NA	29	True	AATAAA	-20	NA	74645870	74698106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675811_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.41	chr17	+	3047	16	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	-105	-2	intron_retention	FALSE	canonical	1	2	junction_3	64.6884499393482	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTCAAGGCCTTC	9736	False	NA	14	True	AATAAA	-18	NA	74645876	74695479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666250_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.43	chr17	+	4861	18	NNC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.9158193257147	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9753	False	NA	33	True	AATAAA	-24	NA	74645893	74698110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666250_74666345_74668064_74668145_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.44	chr17	+	2022	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-109	-167	-59	-7	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTTTTGTTCAAGG	9782	False	NA	9	True	AATAAA	-13	NA	74645922	74695474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.45	chr17	+	4367	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	154	-2455	5	-174	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACTGCTTAATGGTTT	9995	False	NA	NA	False	NA	NA	NA	74646135	74697936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.46	chr17	+	1688	14	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	87.0522525530283	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	10000	False	NA	13	True	AATAAA	-17	NA	74646140	74695478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.47	chr17	+	1866	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	67.0023548508226	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTCAAGGCCTT	10000	False	NA	13	True	AATAAA	-17	NA	74646140	74695478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74695184
ES.15718.5	chr17	+	3347	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-265	1109	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	64.0070829413954	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTTACAGAATTTTTC	9576	False	NA	NA	False	TATAAA	-38	NA	74645716	74696590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.50	chr17	+	4510	17	NNC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	30	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	62.5768277799378	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTATAGTCTTCGA	NA	False	NA	29	True	AATAAA	-20	NA	74646160	74698106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674438_74675831_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.52	chr17	+	5349	16	NIC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	73	-4	intron_retention	FALSE	canonical	3	146	junction_1	31.7347338626517	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTATAGTCTTCGA	NA	False	NA	29	True	AATAAA	-20	NA	74646203	74698106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.53	chr17	+	1686	17	NNC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	226	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	65.1487480693221	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTCAAGGCCTTCT	NA	False	NA	15	True	AATAAA	-19	NA	74646356	74695480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674422_74675820_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.54	chr17	+	6573	11	NIC	ENSMUSG00000024068.9	novel	1746	16	NA	NA	735	77	intron_retention	FALSE	canonical	3	183	junction_1	20.4746184335631	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATGCAAAGCAGTGAA	4695	False	NA	110	True	AATAAA	-9	NA	74675025	74698187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.55	chr17	+	5011	1	NIC	ENSMUSG00000024068.9	novel	2066	17	NA	NA	3334	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAGAAAAAAAAAAAA	7294	False	NA	NA	False	NA	NA	NA	74677624	74682635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74677600_74682600
ES.15718.7	chr17	+	2325	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-250	-9	-250	9	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTTCTTGCGTGATGG	9591	False	NA	25	True	AATAAA	-29	NA	74645731	74695490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.8	chr17	+	4929	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-297	-2886	-247	83	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAGCAGTGAATAGAAG	9594	False	NA	116	True	AATAAA	-15	NA	74645734	74698193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15718.9	chr17	+	3468	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	-272	1476	-246	1153	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCATGGGTAGAAGG	9595	False	NA	NA	False	NA	NA	NA	74645735	74696634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ES.15719.1	chr17	-	3732	4	Intergenic	novelGene_13091	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	74667196	74603979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74604062_74660256_74663161_74666244_74666481_74666686
ES.15719.10	chr17	-	630	5	NNC	ENSMUSG00000024067.15	novel	734	5	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_4	1111.07411431461	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATAGTTGTTGTATAT	NA	False	NA	-17	True	AATAAA	-17	NA	74623390	74606475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623083_74623339
ES.15719.13	chr17	-	763	6	NNC	ENSMUSG00000024067.15	novel	734	5	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1207.61162631038	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTTATAGTTGTTGT	NA	False	NA	-21	True	AATAAA	-13	NA	74623367	74606479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74606820_74614221_74614353_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ES.15719.14	chr17	-	822	1	NIC	ENSMUSG00000024067.15	novel	734	5	NA	NA	1	-15780	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGACCACGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	74623388	74622566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_74622600_74623400
ES.15719.15	chr17	-	203	1	Intergenic	novelGene_13094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATTTGAGGAGACAGC	NA	False	NA	NA	False	NA	NA	NA	74644132	74643929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74643900_74644100
ES.15719.16	chr17	-	178	1	Intergenic	novelGene_13095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAGAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	74662947	74662769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74662800_74662900
ES.15719.2	chr17	-	2697	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	70	-2033	1	2033	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGACTGAAGCTAGTCG	NA	False	NA	NA	False	AATAAA	-17	NA	74623388	74604435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ES.15719.3	chr17	-	715	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	17	2	17	-2	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTGTTGTATATGACAA	NA	False	NA	-12	True	AATAAA	-22	NA	74623441	74606470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ES.15719.4	chr17	-	807	5	FSM	ENSMUSG00000024067.15	ENSMUST00000112571.5	622	5	-5	-180	-5	-2	multi-exon	FALSE	canonical	3	140	junction_4	1057.76707620345	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTGTTGTATATGACAA	NA	False	NA	-12	True	AATAAA	-22	NA	74623408	74606470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623214
ES.15719.5	chr17	-	806	6	NNC	ENSMUSG00000024067.15	novel	734	5	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1206.65809573383	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGTTGTATATGACA	NA	False	NA	-13	True	AATAAA	-21	NA	74623447	74606471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74606820_74608746_74608833_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ES.15719.6	chr17	-	528	4	FSM	ENSMUSG00000024067.15	ENSMUST00000233187.2	512	4	-13	-3	1	1	multi-exon	FALSE	canonical	3	85	junction_1	1032.98047738893	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATAGTTGTTGTATAT	NA	False	NA	-17	True	AATAAA	-17	NA	74623402	74606475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_74606820_74622896_74622945_74623038_74623112_74623339
ES.15719.9	chr17	-	1803	1	NIC	ENSMUSG00000024067.15	novel	734	5	NA	NA	14920	1	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATAGTTGTTGTATAT	NA	False	NA	-17	True	AATAAA	-17	NA	74608278	74606475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_74606500_74608300
ES.1572.1	chr1	-	160	1	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATGAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	151476714	151476554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151476600_151476700
ES.15720.1	chr17	+	2217	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	6	-75	6	75	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATGGTTCCCAGTGTTT	NA	False	NA	NA	False	AATAGA	-22	NA	74702608	74731291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.10	chr17	+	2429	12	NIC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	55.1382934534492	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGGCAGTGAGGT	NA	False	NA	14	True	TATAAA	-17	NA	74702625	74730662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74702664_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.12	chr17	+	4022	15	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	3	2083	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	51.6269981577034	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTTCTCTAGACAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	74702627	74733299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011_74732748_74732931
ES.15720.13	chr17	+	4762	10	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	3	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	81.4263281351938	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTCTTGTGGCAGT	NA	False	NA	9	True	TATAAA	-12	NA	74702627	74730657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712908_74718831_74719318_74719601_74719722_74722614_74724869_74724911_74725663_74726526_74726596_74730011
ES.15720.14	chr17	+	4199	14	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	3	2086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.5616660589074	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTCTCTAGACAATTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	74702627	74733302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730021
ES.15720.15	chr17	+	1929	14	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.5758048367481	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTGAGGTATATTCTA	NA	False	NA	7	True	AATAAA	-20	NA	74702628	74731002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717307_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.16	chr17	+	2516	13	NIC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	5	4	intron_retention	FALSE	canonical	3	152	junction_5	21.8916206699174	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCAGTGAGGTCTTT	NA	False	NA	18	True	TATAAA	-21	NA	74702629	74730666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.17	chr17	+	259	1	NIC	ENSMUSG00000024069.15	novel	1589	13	NA	NA	-7	-13870	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCGACTTGAGGCTTGC	NA	False	NA	NA	False	ATTAAA	-27	NA	74702632	74702891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74702600_74702900
ES.15720.18	chr17	+	1443	12	ISM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	8395	558	2091	-3	3prime_fragment	FALSE	canonical	3	152	junction_3	19.4349944240914	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCTTGTGGCAGTG	8272	False	NA	10	True	TATAAA	-13	NA	74710997	74730658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.19	chr17	+	180	1	Intergenic	novelGene_13096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATGCTTATCAG	9556	False	NA	NA	False	NA	NA	NA	74712281	74712461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74712300_74712500
ES.15720.2	chr17	+	1578	14	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.0375376573852	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCTTGTGGCAGTG	NA	False	NA	10	True	TATAAA	-13	NA	74702615	74730658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708905_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.3	chr17	+	2791	13	NIC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	0	-77	intron_retention	FALSE	canonical	3	152	junction_5	21.8916206699174	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGCTTAATTGCTACA	NA	False	NA	-68	True	AGTAAA	-17	NA	74702615	74730927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.4	chr17	+	2166	14	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.5616660589074	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATCGTAGTATATTTGT	NA	False	NA	NA	False	AATAAA	-30	NA	74702615	74731223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74729987
ES.15720.5	chr17	+	1921	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	214	0	-2	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTGAGGTATATTCTA	NA	False	NA	7	True	AATAAA	-20	NA	74702615	74731002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.7	chr17	+	1687	14	NNC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.5754735018436	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCTTGTGGCAGTG	NA	False	NA	10	True	TATAAA	-13	NA	74702616	74730658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719429_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15720.9	chr17	+	3306	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	23	-1181	1	1181	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCAATTGCTAAGT	NA	False	NA	NA	False	ATTAAA	-10	NA	74702625	74732397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ES.15721.1	chr17	+	181	1	Intergenic	novelGene_13097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATGCCTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	74735106	74735287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74735100_74735300
ES.15722.1	chr17	-	974	2	NNC	ENSMUSG00000039193.10	novel	3110	8	NA	NA	14953	508	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATATATGCTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	74740248	74733303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74734130_74740100
ES.15722.2	chr17	-	981	2	ISM	ENSMUSG00000039193.10	ENSMUST00000234086.2	3154	8	14315	-517	14315	506	3prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCATATATGCTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	74740886	74733305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_74734130_74740729
ES.15723.1	chr17	+	159	1	Intergenic	novelGene_13099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATGAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74766274	74766433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74766300_74766400
ES.15724.1	chr17	+	171	1	Intergenic	novelGene_13100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCTAATCAG	NA	False	NA	NA	False	NA	NA	NA	74767071	74767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74767100_74767200
ES.15725.1	chr17	+	177	1	Intergenic	novelGene_13101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	74791575	74791752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74791600_74791800
ES.15726.1	chr17	+	1838	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	-9	304	-9	13	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTTGTCCTATATTAC	NA	False	NA	18	True	AATAAA	-30	NA	74796478	74806968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ES.15726.11	chr17	+	992	2	Intergenic	novelGene_13102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	74812956	74814739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74813652_74814442
ES.15726.12	chr17	+	171	1	Intergenic	novelGene_13104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGGTACTATGTTT	9956	False	NA	NA	False	NA	NA	NA	74830699	74830870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74830700_74830900
ES.15726.13	chr17	+	7027	29	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-184	88321	-11	-1465	5prime_fragment	FALSE	canonical	2	12	junction_13	9.22618279569573	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74835278	74921057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371
ES.15726.14	chr17	+	8197	31	ISM	ENSMUSG00000024073.17	ENSMUST00000182597.8	14649	73	-184	85674	-11	1182	5prime_fragment	FALSE	canonical	1	4	junction_22	9.89438673637173	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTGTTTTGACTTTGT	NA	False	NA	NA	False	AATGAA	-14	NA	74835278	74923704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913131_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214
ES.15726.15	chr17	+	7604	31	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-183	86254	-10	602	5prime_fragment	FALSE	canonical	2	12	junction_13	9.07138357694128	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGCATTGAAGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	74835279	74923124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214
ES.15726.16	chr17	+	3604	13	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	-192	107987	65	-11940	5prime_fragment	FALSE	canonical	3	10	junction_12	9.20258115965298	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGGTTGATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	74835354	74901391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901316
ES.15726.17	chr17	+	6922	31	NIC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	71	-41	combination_of_known_junctions	FALSE	canonical	2	10	junction_12	9.49274576833396	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTTGTTGTTGTT	NA	False	NA	NA	False	AAAACA	-18	NA	74835360	74922481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901316_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214
ES.15726.18	chr17	+	4360	2	NNC	ENSMUSG00000024073.17	novel	2804	6	NA	NA	71	-14073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAGAAAAAACCACTT	NA	False	NA	NA	False	NA	NA	NA	74835360	74842030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74837904_74840213
ES.15726.19	chr17	+	6740	29	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-102	88526	71	-1670	5prime_fragment	FALSE	canonical	2	12	junction_13	9.22618279569573	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGAGTTTGTTCTCTGCC	NA	False	NA	NA	False	ACTAAA	-19	NA	74835360	74920852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371
ES.15726.2	chr17	+	2097	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	-9	45	-9	-45	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTATGACATCGTCTC	NA	False	NA	NA	False	NA	NA	NA	74796478	74807227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ES.15726.20	chr17	+	15420	73	NIC	ENSMUSG00000024073.17	novel	14649	73	NA	NA	82	6	combination_of_known_junctions	TRUE	canonical	2	12	junction_13	10.0457191761184	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTCTGAATGTATC	NA	False	NA	11	True	AATAAA	-29	NA	74835371	75010070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922353_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.21	chr17	+	2659	1	NIC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	-83	-18065	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACAGGAGTTTTAAATA	NA	False	NA	NA	False	AAGAAA	-9	NA	74835379	74838038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835400_74838000
ES.15726.22	chr17	+	6827	29	NNC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	-83	-1465	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	10.2728093647696	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74835379	74921057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915181_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371
ES.15726.23	chr17	+	7934	27	NIC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	-69	-1465	intron_retention	FALSE	canonical	2	12	junction_13	9.29250190831169	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74835393	74921057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371
ES.15726.24	chr17	+	8067	31	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	-69	85677	-69	1179	5prime_fragment	FALSE	canonical	2	12	junction_13	9.07138357694128	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCGTTGTTTTGACTT	NA	False	NA	NA	False	AATGAA	-11	NA	74835393	74923701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214
ES.15726.25	chr17	+	2544	2	NNC	ENSMUSG00000024073.17	novel	2804	6	NA	NA	-36	-18065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACAGGAGTTTTAAATA	NA	False	NA	NA	False	AAGAAA	-9	NA	74835426	74838038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74837672_74837739
ES.15726.26	chr17	+	2438	5	ISM	ENSMUSG00000024073.17	ENSMUST00000182382.2	2804	6	-88	4143	-34	161	5prime_fragment	FALSE	canonical	3	30	junction_3	5.43139024560011	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATTTATTCTACACTT	NA	False	NA	NA	False	NA	NA	NA	74835428	74869701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145
ES.15726.27	chr17	+	15484	74	NIC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_65	10.8904195743914	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGGGCCTCTGAAT	NA	False	NA	6	True	AATAAA	-24	NA	74835448	75010065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74993115_74993289_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.28	chr17	+	7983	31	NIC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	-1	1181	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	10.0852477521488	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTTGTTTTGACTTTG	NA	False	NA	NA	False	AATGAA	-13	NA	74835461	74923703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920389_74920592_74921293_74921428_74922214
ES.15726.29	chr17	+	8263	42	NNC	ENSMUSG00000024073.17	novel	14649	73	NA	NA	23	-4265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.2875955523466	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTGTAAGCATTTCTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	74835485	74942969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915181_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922353_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757
ES.15726.3	chr17	+	1215	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	12	906	12	-1	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTGTCAATATTCACC	NA	False	NA	5	True	AATAAA	-21	NA	74796499	74806366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ES.15726.30	chr17	+	7319	10	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	2	18555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.1421620301095	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGCTTTCATGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	74835518	74892399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74889360_74889710
ES.15726.31	chr17	+	14895	73	NNC	ENSMUSG00000024073.17	novel	14610	73	NA	NA	87	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_66	11.5685023626043	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCTGGAGACTTGCA	NA	False	NA	72	True	AATAAA	-16	NA	74835633	75009952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915181_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926719_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996358_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.32	chr17	+	14395	69	ISM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	32742	-692	427	6	3prime_fragment	FALSE	canonical	2	12	junction_9	10.0984342203345	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCTCTGAATGTATC	NA	False	NA	11	True	AATAAA	-29	NA	74868204	75010070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.33	chr17	+	6398	3	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	37526	116977	5295	18557	internal_fragment	FALSE	canonical	3	34	junction_2	2	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCTTTCATGTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	74873072	74892401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74873170_74880567_74880627_74886159
ES.15726.34	chr17	+	13257	65	NIC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	18469	166	combination_of_known_junctions	FALSE	canonical	1	4	junction_14	10.9315050534853	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTGTAAACTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	74886246	75009544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901316_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913131_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.35	chr17	+	3412	16	NIC	ENSMUSG00000024073.17	novel	14649	73	NA	NA	1778	3065	combination_of_known_junctions	FALSE	canonical	3	12	junction_13	5.49504827599863	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGTCAGTGTTCTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	74906893	74929815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922353_74925430_74925559_74926701_74926834_74929030
ES.15726.36	chr17	+	9773	46	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	-228	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	10.9948585066042	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATGTCTTGTTTCTAA	NA	False	NA	11	True	AATAAA	-17	NA	74918991	75010345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996363_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.38	chr17	+	8143	37	ISM	ENSMUSG00000024073.17	ENSMUST00000180037.8	15768	73	96809	4	-10618	-4	3prime_fragment	FALSE	canonical	3	23	junction_20	9.20895129483359	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTCTTGTTTCTAAAA	NA	False	NA	13	True	AATAAA	-19	NA	74932098	75010347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.39	chr17	+	2098	12	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	100852	55822	-6318	5940	internal_fragment	FALSE	canonical	3	29	junction_2	5.95159538303015	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTCAGCTTGTCAAA	NA	False	NA	NA	False	NA	NA	NA	74936398	74953556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463
ES.15726.4	chr17	+	1057	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	13	1063	13	-158	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGAGAGGCAGGCTTAA	NA	False	NA	NA	False	AGTAAA	-15	NA	74796500	74806209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ES.15726.41	chr17	+	6801	29	ISM	ENSMUSG00000024073.17	ENSMUST00000180037.8	15768	73	111483	286	4056	1	3prime_fragment	FALSE	canonical	3	23	junction_12	9.93415824315276	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGGGCCTCTGAAT	NA	False	NA	6	True	AATAAA	-24	NA	74946772	75010065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.42	chr17	+	6708	29	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	4122	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.7069022178238	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGCCTCTGAATGTA	NA	False	NA	9	True	AATAAA	-27	NA	74946838	75010068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959017_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.44	chr17	+	3003	13	ISM	ENSMUSG00000024073.17	ENSMUST00000183224.8	14562	73	111421	47954	4251	-36	internal_fragment	FALSE	canonical	3	23	junction_12	9.38490217790729	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGATAAAGAAAAGAAGAA	NA	False	NA	-20	True	NA	NA	NA	74946967	74961424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383
ES.15726.45	chr17	+	7010	28	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	4404	4	intron_retention	FALSE	canonical	0	0	junction_22	13.3765759683294	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGCCTCTGAATGTA	NA	False	NA	9	True	AATAAA	-27	NA	74947120	75010068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961366_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996363_74997352_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.46	chr17	+	6260	29	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	4456	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	11.7692525728038	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGCCAAACATTTGGG	NA	False	NA	-3	True	AATAAA	-15	NA	74947172	75010056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966285_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.48	chr17	+	6287	27	NNC	ENSMUSG00000024073.17	novel	15768	73	NA	NA	6590	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	13.4763105761763	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGTTTCTAAAATAG	NA	False	NA	16	True	AATAAA	-22	NA	74949306	75010350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975759_74975919_74977208_74977378_74984160_74984375_74996212_74996358_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ES.15726.52	chr17	+	170	1	Intergenic	novelGene_13108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCTAATAGATTTA	NA	False	NA	NA	False	NA	NA	NA	74996548	74996718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_74996500_74996700
ES.15726.6	chr17	+	1608	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	18	507	18	-190	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTGATTTAAAGTTC	NA	False	NA	NA	False	AAGAAA	-17	NA	74796505	74806765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ES.15726.7	chr17	+	1824	7	NNC	ENSMUSG00000024072.10	novel	1991	7	NA	NA	18	29188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	166.518267266187	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAGGTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	74796505	74836460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965_74806953_74836431
ES.15727.1	chr17	-	183	1	Intergenic	novelGene_13098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74758398	74758215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74758200_74758400
ES.15727.10	chr17	-	2251	2	Genic_Genomic	ENSMUSG00000117358.2	novel	327	3	NA	NA	2	-5215	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74835087	74831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_74832303_74833256
ES.15727.11	chr17	-	1989	1	Intergenic	novelGene_13105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAACTGGAATTGAAGCC	NA	False	NA	NA	False	NA	NA	NA	74834370	74832381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74832400_74834400
ES.15727.2	chr17	-	181	2	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74842490	74758215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74758273_74842366
ES.15727.3	chr17	-	193	1	Intergenic	novelGene_13103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCCCTTCTAGTCCAC	NA	False	NA	NA	False	NA	NA	NA	74823189	74822996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74823000_74823200
ES.15727.4	chr17	-	384	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	254	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCTCAGTGTTCCCC	NA	False	NA	-1	True	AATAAA	-18	NA	74834385	74826655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74826911_74830509_74830574_74834320
ES.15727.5	chr17	-	515	4	NNC	ENSMUSG00000117358.2	novel	1389	4	NA	NA	232	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.942809041582063	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTGGTCTCAGTGTTC	NA	False	NA	-4	True	AATAAA	-15	NA	74834407	74826658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74826911_74829939_74830052_74830509_74830574_74834320
ES.15727.6	chr17	-	412	3	NNC	ENSMUSG00000117358.2	novel	327	3	NA	NA	254	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	41.5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCATTGGTCTCAGT	NA	False	NA	-8	True	AATAAA	-11	NA	74834385	74826662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74826911_74830509_74830574_74834285
ES.15727.7	chr17	-	1803	4	NNC	ENSMUSG00000117358.2	novel	1389	4	NA	NA	254	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2.35702260395516	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCATTGGTCTCAGT	NA	False	NA	-8	True	AATAAA	-11	NA	74834385	74826662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74826911_74827487_74828278_74828357_74828483_74833745
ES.15727.9	chr17	-	605	4	NNC	ENSMUSG00000117358.2	novel	1389	4	NA	NA	261	-1252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.07106781186548	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATACAGCCATAAACTA	NA	False	NA	NA	False	NA	NA	NA	74834378	74827919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_74828278_74828357_74828483_74830509_74830574_74834320
ES.15728.1	chr17	-	177	1	Intergenic	novelGene_13106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74847538	74847361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74847400_74847500
ES.15729.1	chr17	-	169	1	Intergenic	novelGene_13107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74863077	74862908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_74862900_74863100
ES.1573.1	chr1	-	2915	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCCACTGGGACCTAT	9787	False	NA	NA	False	NA	NA	NA	151510988	151508073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151508100_151511000
ES.15730.2	chr17	-	5637	1	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAAAGCTC	9007	False	NA	NA	False	NA	NA	NA	74941294	74935657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74935700_74941300
ES.15730.3	chr17	-	4608	18	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAAAGCTC	NA	False	NA	NA	False	NA	NA	NA	74959681	74935657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74936517_74937954_74938108_74938603_74938731_74941788_74941902_74942757_74942889_74945334_74945464_74946772_74947335_74948624_74948804_74949255_74949352_74949485_74949686_74950293_74950491_74953463_74953742_74954196_74954450_74954706_74954819_74955110_74955335_74956617_74957397_74958900_74959047_74959611
ES.15730.4	chr17	-	4864	17	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAAAGCTC	NA	False	NA	NA	False	NA	NA	NA	74959681	74935657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74936517_74937954_74938108_74938603_74938731_74941788_74941902_74942757_74942889_74945334_74945464_74946772_74947335_74948624_74948804_74949255_74949352_74949485_74949686_74950293_74950491_74953463_74953742_74954196_74954819_74955110_74955335_74956617_74957397_74958900_74959045_74959610
ES.15730.6	chr17	-	4601	18	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74959681	74935685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74936517_74937954_74938108_74938603_74938731_74941788_74941902_74942757_74942889_74945313_74945464_74946772_74947335_74948624_74948804_74949255_74949352_74949485_74949686_74950293_74950491_74953463_74953742_74954196_74954450_74954706_74954819_74955110_74955335_74956617_74957397_74958900_74959047_74959611
ES.15730.7	chr17	-	3471	1	Antisense	novelGene_ENSMUSG00000024073.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATATGGATTAACGA	NA	False	NA	NA	False	NA	NA	NA	74962300	74958829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_74958800_74962300
ES.15731.1	chr17	+	159	2	Intergenic	novelGene_13109	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	5546	False	NA	NA	False	NA	NA	NA	75011361	75012070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_75011382_75011931
ES.15731.2	chr17	+	243	1	Intergenic	novelGene_13110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATGGGAAAG	6096	False	NA	NA	False	AATGAA	-40	NA	75011911	75012154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_75011900_75012200
ES.15732.1	chr17	+	2769	21	NNC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5724964966845	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024692	75170565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75024780_75024882_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.10	chr17	+	2620	18	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	38.919933783021	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCCTTATTTTGTGAT	NA	False	NA	3	True	AATAAA	-14	NA	75024757	75170558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.11	chr17	+	2731	21	NNC	ENSMUSG00000024078.8	novel	2651	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.9237405173407	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTGATGTTCTCAGA	NA	False	NA	12	True	AATAAA	-23	NA	75024757	75170567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75024808_75024882_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
ES.15732.13	chr17	+	2754	21	NNC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	47.3806658881025	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACGTCCTTATTTTGTG	NA	False	NA	1	True	AATAAA	-12	NA	75024882	75170556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75147583_75147665_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.14	chr17	+	6343	20	NNC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	41	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	36.5560322013305	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTGATGTTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	75024947	75170565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75168123_75168321_75169142_75170328
ES.15732.2	chr17	+	2884	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	5	-51	5	51	multi-exon	FALSE	canonical	3	124	junction_5	16.0728948897983	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTTTATACCTTTG	NA	False	NA	61	True	NA	NA	NA	75024731	75170616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.3	chr17	+	2770	19	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	38.1393238625353	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTATTTTGTGATGTT	NA	False	NA	6	True	AATAAA	-17	NA	75024737	75170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.4	chr17	+	2676	19	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	36.8121692171099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTATTTTGTGATGTT	NA	False	NA	6	True	AATAAA	-17	NA	75024743	75170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.5	chr17	+	1832	12	ISM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	21	82456	-9	259	5prime_fragment	FALSE	canonical	3	124	junction_5	13.3106556457226	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGATTAGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	75024747	75088109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777
ES.15732.6	chr17	+	2589	18	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.8252227794694	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACGTCCTTATTTTGTG	NA	False	NA	1	True	AATAAA	-12	NA	75024747	75170556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.7	chr17	+	2356	17	NIC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	39.9028116177294	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCCTTATTTTGTGAT	NA	False	NA	3	True	AATAAA	-14	NA	75024754	75170558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ES.15732.8	chr17	+	2845	20	NNC	ENSMUSG00000024078.8	novel	2838	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	35.7391286765578	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTATTTTGTGATGTT	NA	False	NA	6	True	AATAAA	-17	NA	75024754	75170561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169001_75169142_75170328
ES.15733.1	chr17	+	222	1	Intergenic	novelGene_13111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGAGGGAGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	75241279	75241501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_75241300_75241500
ES.15734.1	chr17	+	215	1	Intergenic	novelGene_13112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACGTATTG	NA	False	NA	NA	False	AAAAAG	-11	NA	75268936	75269151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_75268900_75269200
ES.15735.10	chr17	+	6368	34	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	8	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	5.00871600276228	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTATGATACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	75312714	75698770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.11	chr17	+	6547	34	NNC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.17304784874404	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATGATACTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	75312714	75698772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573464_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.12	chr17	+	6527	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	152	-8	-98	8	multi-exon	FALSE	canonical	2	10	junction_21	5.00871600276228	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTATGATACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	75312714	75698770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.13	chr17	+	5903	33	NNC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	6.24116563131439	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75312717	75698321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75589312_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.14	chr17	+	5608	32	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	6.94545419875872	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75312741	75698331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.15	chr17	+	5744	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-42	-110	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	5.84358288531103	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTGTGATGTGTAAA	NA	False	NA	NA	False	NA	NA	NA	75312770	75698211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.16	chr17	+	5883	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.24468524026632	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75312783	75698321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.17	chr17	+	5469	32	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	31	-51	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.32735172190507	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACATTTACCATTGTATG	NA	False	NA	NA	False	ATTAAA	-19	NA	75312843	75698270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.18	chr17	+	5471	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	182	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	5.84358288531103	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75312994	75698321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.19	chr17	+	5175	31	NNC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	209	-18821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	6.76953961999386	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTAGCCTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	75313021	75679500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75678700
ES.15735.2	chr17	+	5938	34	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_21	5.00871600276228	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75312705	75698331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.20	chr17	+	4946	30	NNC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-27545	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.3809215128005	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAATTTGAGTGT	2600	False	NA	NA	False	AATAAA	-16	NA	75458259	75698320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589917_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.21	chr17	+	4430	29	NNC	ENSMUSG00000001870.17	novel	4870	30	NA	NA	46385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	6.53825087388025	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	4828	False	NA	NA	False	AATAAA	-17	NA	75532290	75698321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666290_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.22	chr17	+	3823	24	NNC	ENSMUSG00000001870.17	novel	5140	30	NA	NA	-37592	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	8.2434599155914	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75559378	75698321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75666284_75666465_75667706_75667795_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.23	chr17	+	2987	20	ISM	ENSMUSG00000001870.17	ENSMUST00000112514.2	4870	30	104010	430	-7055	-430	3prime_fragment	FALSE	canonical	2	10	junction_7	5.02624689950035	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAAATGTTTTATGTGA	NA	False	NA	NA	False	TTTAAA	-5	NA	75589915	75697891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.24	chr17	+	4595	8	NIC	ENSMUSG00000001870.17	novel	5140	30	NA	NA	17039	553	intron_retention	FALSE	canonical	0	0	junction_1	8.98979012717273	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAAAACCCACCAAA	NA	False	NA	NA	False	NA	NA	NA	75634189	75700060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75634318_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424
ES.15735.3	chr17	+	5645	32	NNC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-101	-18826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.92339531628197	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATCTGTTAGCCTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	75312711	75679495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589917_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75678700
ES.15735.5	chr17	+	6090	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	150	431	-100	0	multi-exon	FALSE	canonical	2	10	junction_21	5.00871600276228	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75312712	75698331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.6	chr17	+	5407	29	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	-53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	6.41456808159906	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACATTTACCATTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	75312714	75698268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.7	chr17	+	5803	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.24468524026632	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75312714	75698331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.8	chr17	+	6403	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.24468524026632	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATGATACTTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	75312714	75698772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15735.9	chr17	+	6194	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	2	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	5.84358288531103	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACCTGTCTATGATAC	NA	False	NA	NA	False	NA	NA	NA	75312714	75698764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ES.15736.1	chr17	-	3816	3	Intergenic	novelGene_13113	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTAAACT	NA	False	NA	NA	False	NA	NA	NA	75843275	75839078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_75840137_75840391_75841197_75841322
ES.15736.11	chr17	-	2609	8	NNC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	73.6796707209731	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858843	75844087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851845_75851878_75854605_75854755_75858735
ES.15736.13	chr17	-	2633	8	NNC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.0033093578819	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTGCTCTGGGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	75858873	75844089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_75845857_75846048_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.14	chr17	-	6912	2	ISM	ENSMUSG00000002017.11	ENSMUST00000140729.2	663	3	-3720	-1936	-3720	0	intron_retention	FALSE	canonical	3	222	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTGCTCTGGGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	75851287	75844089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_75846110_75846395
ES.15736.15	chr17	-	3154	1	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	324	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTGCTCTGGGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	75847243	75844089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_75844100_75847200
ES.15736.16	chr17	-	1968	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	87	762	3	-753	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGGATTTGCCTGGA	NA	False	NA	NA	False	AATAAA	-33	NA	75858854	75844842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.17	chr17	-	1801	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	84	932	0	-923	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGTTTATTTAAGAAA	NA	False	NA	NA	False	ACTAAA	-12	NA	75858857	75845012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.18	chr17	-	5592	6	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-3	430	intron_retention	FALSE	canonical	3	161	junction_3	26.9488404203224	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGGGAGTGGAAGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	75858860	75845595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75851878_75854605_75854755_75858735
ES.15736.19	chr17	-	1228	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	67	1522	-6	423	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGATGGAGGGAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	75858874	75845602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.2	chr17	-	7228	10	NNC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-15	4850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.678622661227	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTGTGTTTGGCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	75858883	75839230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_75840137_75840391_75841208_75841333_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.20	chr17	-	963	1	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-10	-6454	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCCCTGCATGATT	NA	False	NA	NA	False	NA	NA	NA	75858878	75857915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_75857900_75858900
ES.15736.3	chr17	-	2761	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	57	-1	-16	1	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGAGTTTTCTTTTAG	NA	False	NA	0	True	AATAAA	-23	NA	75858884	75844079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.4	chr17	-	2831	7	FSM	ENSMUSG00000002017.11	ENSMUST00000234785.2	2809	7	-13	-9	-2	0	multi-exon	FALSE	canonical	3	156	junction_3	30.3296701084745	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGAGTTTTCTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	75858870	75844080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.5	chr17	-	6708	6	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-9	4	intron_retention	FALSE	canonical	3	156	junction_3	28.555910071297	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTCTGGGAGTTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	75858877	75844085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_75845857_75845941_75846110_75846395_75847187_75848190_75851878_75854605_75854755_75858735
ES.15736.7	chr17	-	2682	9	NNC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-1	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	87.3656110835379	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858869	75844087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_75845304_75845360_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851879_75854605_75854755_75858735
ES.15736.8	chr17	-	3336	7	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	-6	2	intron_retention	FALSE	canonical	3	156	junction_3	26.5560204515327	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858874	75844087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_75845857_75845941_75846110_75846395_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15736.9	chr17	-	2771	8	NNC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.1578570018177	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGCTCTGGGAGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	75858908	75844087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847181_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ES.15737.1	chr17	-	176	1	Intergenic	novelGene_13114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAATTGAAATTGGA	NA	False	NA	NA	False	NA	NA	NA	77164376	77164200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_77164200_77164400
ES.15738.1	chr17	+	176	1	Intergenic	novelGene_13115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGGAAG	NA	False	NA	NA	False	NA	NA	NA	77578912	77579088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_77578900_77579100
ES.15739.1	chr17	+	204	1	Intergenic	novelGene_13116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTCCTTCCAAATATAAAA	NA	False	NA	NA	False	NA	NA	NA	78058284	78058488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_78058300_78058500
ES.1574.1	chr1	-	158	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAATAAATAGAT	5570	False	NA	NA	False	NA	NA	NA	151515205	151515047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151515000_151515200
ES.15740.1	chr17	+	178	1	Intergenic	novelGene_13117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	78477872	78478050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_78477900_78478000
ES.15741.1	chr17	+	4122	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-84	1957	-84	353	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATTTCTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	78507592	78682064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.2	chr17	+	6076	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-82	1	-82	-1	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTAGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	78507594	78684020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.3	chr17	+	2215	6	NNC	ENSMUSG00000024074.9	novel	2487	15	NA	NA	-73	-7870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.08330601085553	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTATTTGTATGTGAAT	NA	False	NA	NA	False	NA	NA	NA	78507603	78612747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78612117
ES.15741.4	chr17	+	4623	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-64	1436	-64	874	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGGATTTTTTTTCC	NA	False	NA	NA	False	AAAAAG	-12	NA	78507612	78682585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.5	chr17	+	5800	16	NIC	ENSMUSG00000024074.9	novel	5995	17	NA	NA	-57	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	4.04639757479827	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGAGTTCTGTAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	78507619	78684012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_78508529_78545170_78545345_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.6	chr17	+	3771	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	-57	2281	-57	29	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGCTTAGTGTCTTGT	NA	False	NA	NA	False	AGTAAA	-12	NA	78507619	78681740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.7	chr17	+	3277	14	NIC	ENSMUSG00000024074.9	novel	5995	17	NA	NA	-41	37	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.3947251867956	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCTTGTGTCAGATT	NA	False	NA	NA	False	AGTAAA	-20	NA	78507635	78681748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_78508529_78545170_78545345_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15741.8	chr17	+	3306	6	NNC	ENSMUSG00000024074.9	novel	5995	17	NA	NA	3751	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.19230199429887	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTAGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	78662068	78684020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_78662108_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ES.15742.1	chr17	-	1215	6	Antisense	novelGene_ENSMUSG00000024074.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTGATTTACTATG	NA	False	NA	NA	False	AATAAA	-14	NA	78654618	78639411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_78639939_78641456_78641649_78641797_78641969_78642666_78642768_78646574_78646663_78654482
ES.15743.1	chr17	+	159	1	Intergenic	novelGene_13118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	78699236	78699395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_78699200_78699400
ES.15744.1	chr17	-	1930	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	15	-6	15	-1	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGAGTTTTTGTTCGG	NA	False	NA	0	True	AATAAA	-19	NA	78725545	78685307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ES.15744.3	chr17	-	1651	9	NNC	ENSMUSG00000056121.17	novel	2041	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.8162303579096	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	78725528	78685314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78685859_78686113_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ES.15744.4	chr17	-	3756	7	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	258	junction_3	16.8267313786394	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	78725532	78685314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78712274_78720292_78720402_78725261
ES.15744.5	chr17	-	2062	9	NNC	ENSMUSG00000056121.17	novel	2041	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	123.614066756175	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	78725529	78685314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78724253_78724409_78725261
ES.15744.6	chr17	-	1494	6	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	114.837972813874	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	78725527	78685314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_78686175_78689036_78689103_78692172_78692249_78712156_78712274_78720292_78720402_78725261
ES.15744.7	chr17	-	1797	7	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	104.450945424156	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGAGTCTTGAGTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	78725528	78685314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78725261
ES.15744.8	chr17	-	1148	6	ISM	ENSMUSG00000056121.17	ENSMUST00000234029.2	1516	7	-16	6698	-3	-6690	5prime_fragment	FALSE	canonical	3	258	junction_1	18.0731845561318	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGAGTTGAGTGTTGTTT	NA	False	NA	NA	False	AGTAAA	-22	NA	78725528	78692004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ES.15744.9	chr17	-	4015	5	ISM	ENSMUSG00000056121.17	ENSMUST00000234530.2	2001	10	-15	19633	-2	1965	5prime_fragment	FALSE	canonical	3	281	junction_2	10.7558123821495	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTCTTGAATCTT	NA	False	NA	NA	False	AATAAA	-14	NA	78725527	78704946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ES.15745.1	chr17	+	179	1	Intergenic	novelGene_13119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGGCATGCT	NA	False	NA	NA	False	NA	NA	NA	78744118	78744297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_78744100_78744300
ES.15746.1	chr17	-	165	1	Intergenic	novelGene_13120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	78776822	78776657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_78776700_78776800
ES.15747.1	chr17	+	125	1	Intergenic	novelGene_13121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAAAAAGAAAAG	NA	False	NA	71	True	AATAAA	-14	NA	78800842	78800967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_78800800_78801000
ES.15748.1	chr17	+	5748	1	Antisense	novelGene_ENSMUSG00000024077.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACCCTAAAACTAACCC	NA	False	NA	NA	False	NA	NA	NA	78953249	78958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_78953200_78959000
ES.15749.1	chr17	+	183	1	Intergenic	novelGene_13122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGTGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	79019226	79019409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79019200_79019400
ES.15749.2	chr17	+	297	1	Intergenic	novelGene_13123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79019227	79019524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79019200_79019500
ES.1575.1	chr1	-	223	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCACACCTTTATAACTT	1817	False	NA	NA	False	NA	NA	NA	151518958	151518735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151518700_151519000
ES.15750.1	chr17	+	2873	1	Intergenic	novelGene_13124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	79022246	79025119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79022200_79025100
ES.15751.1	chr17	-	8095	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	539	-5	539	5	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCCTAGGTGTGTCGT	NA	False	NA	-5	True	AATAAA	-19	NA	79044086	78957336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.10	chr17	-	5022	16	NNC	ENSMUSG00000024077.16	novel	8629	18	NA	NA	-3634	2142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.7011941182073	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTATTCAAATGTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	78999880	78959882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78963089_78963177_78963265_78964336_78964438_78965308_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822
ES.15751.11	chr17	-	5205	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	565	2859	565	1824	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTCTTTATTTGAAAG	NA	False	NA	NA	False	TATAAA	-15	NA	79044060	78960200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.12	chr17	-	5253	18	NNC	ENSMUSG00000024077.16	novel	8629	18	NA	NA	539	1824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	10.5836591418304	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTCTTTATTTGAAAG	NA	False	NA	NA	False	TATAAA	-15	NA	79044086	78960200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977346_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.13	chr17	-	5087	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	539	3003	539	1680	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTTAGCTTTTGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	79044086	78960344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.14	chr17	-	3268	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	539	4822	539	-139	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGAGATCCTGTTTAT	NA	False	NA	NA	False	ACTAAA	-16	NA	79044086	78962163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.2	chr17	-	6560	9	NNC	ENSMUSG00000024077.16	novel	2967	16	NA	NA	19558	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.369316876853	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGTTCATGTGCTCC	NA	False	NA	-17	True	AATAAA	-7	NA	78972223	78957348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78959614_78959643_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047
ES.15751.5	chr17	-	6503	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	524	1602	524	-1602	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACCATCAGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	79044101	78958943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.6	chr17	-	6061	19	NIC	ENSMUSG00000024077.16	novel	8629	18	NA	NA	580	-2075	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	12.5589965786176	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCAGGTAACAAATT	NA	False	NA	NA	False	AATAAA	-27	NA	79044045	78959416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78977783_78977871_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.7	chr17	-	5593	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	539	2497	539	2186	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTTTCCATTGAACAT	NA	False	NA	NA	False	NA	NA	NA	79044086	78959838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.8	chr17	-	5644	19	NIC	ENSMUSG00000024077.16	novel	8629	18	NA	NA	539	2150	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	12.5589965786176	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAATGTGAATTGAAAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	79044086	78959874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78977783_78977871_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ES.15751.9	chr17	-	5274	10	NNC	ENSMUSG00000024077.16	novel	2967	16	NA	NA	15801	2142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.0308276458482	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTATTCAAATGTGAA	9468	False	NA	NA	False	ATTAAA	-18	NA	78975980	78959882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78975092_78975303
ES.15752.1	chr17	+	168	1	Intergenic	novelGene_13125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGGACTAC	NA	False	NA	NA	False	NA	NA	NA	79050927	79051095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79050900_79051100
ES.15753.1	chr17	+	190	1	Intergenic	novelGene_13126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATCACCTCCTCCTT	NA	False	NA	NA	False	AATACA	-16	NA	79095793	79095983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79095800_79096000
ES.15754.1	chr17	-	7342	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-41	-913	-1	913	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGATTGTTTCATCCATG	NA	False	NA	NA	False	TATAAA	-22	NA	79142794	79059413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.10	chr17	-	6767	36	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	19.2115186536513	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAGAGCATTCATACAG	NA	False	NA	NA	False	AATAAA	-16	NA	79142737	79060334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142331
ES.15754.13	chr17	-	6183	35	NIC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.2212801981748	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGAGCATTCATACA	NA	False	NA	NA	False	AATAAA	-15	NA	79142824	79060335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.14	chr17	-	3511	18	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	-9947	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.8527845452774	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGAGCATTCATACA	NA	False	NA	NA	False	AATAAA	-15	NA	79113489	79060335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062769_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375
ES.15754.16	chr17	-	7229	37	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	16	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_35	22.9328562342707	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACACACAGAGCATTCATA	NA	False	NA	NA	False	AATAAA	-13	NA	79142737	79060337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79141792_79142096_79142169
ES.15754.18	chr17	-	6307	36	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	18.8630726607327	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACACACAGAGCATTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	79142753	79060338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070438_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.19	chr17	-	6280	36	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	-18	-89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	19.2115186536513	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCATCTGTATTTATTTA	NA	False	NA	NA	False	AAAACA	-23	NA	79142771	79060450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141671_79142734
ES.15754.2	chr17	-	6461	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-70	-3	-30	3	multi-exon	FALSE	canonical	3	55	junction_23	13.6878912673552	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATACAGTACATTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	79142823	79060323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.21	chr17	-	6758	35	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	-23	1527	13	-1492	5prime_fragment	FALSE	canonical	3	55	junction_22	13.3929499090542	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATTAGTTTGTTGCTT	NA	False	NA	NA	False	AATAAA	-32	NA	79142776	79061853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.22	chr17	-	3447	21	ISM	ENSMUSG00000039414.11	ENSMUST00000232947.2	4345	27	9023	0	8987	0	3prime_fragment	TRUE	canonical	0	0	junction_1	19.8529594771157	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTCATTCATTTTCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	79133766	79091771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79091913_79095610_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660
ES.15754.23	chr17	-	4032	16	ISM	ENSMUSG00000039414.11	ENSMUST00000232947.2	4345	27	7342	15772	7306	11780	internal_fragment	FALSE	canonical	3	55	junction_8	10.1836470219007	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACGAAAGACTGGATTAG	NA	False	NA	NA	False	NA	NA	NA	79135447	79107543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360
ES.15754.24	chr17	-	4618	21	NNC	ENSMUSG00000039414.11	novel	4345	27	NA	NA	-2	11728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.1271404031026	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79142795	79107595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128176_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.25	chr17	-	8924	18	NIC	ENSMUSG00000039414.11	novel	4345	27	NA	NA	-18	11727	intron_retention	FALSE	canonical	3	55	junction_7	10.0875064048122	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	79142771	79107596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79126347_79128049_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.26	chr17	-	2925	17	NNC	ENSMUSG00000039414.11	novel	3680	16	NA	NA	-2	-414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.835572796302	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGACTTTGTGGTT	NA	False	NA	NA	False	TTTAAA	-12	NA	79142795	79119737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79120181_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.27	chr17	-	2741	14	ISM	ENSMUSG00000039414.11	ENSMUST00000232917.2	3680	16	11	2983	7	-2983	5prime_fragment	FALSE	canonical	3	55	junction_1	10.7813119048904	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCATTTTTCTATTACT	NA	False	NA	NA	False	AATAAA	-14	NA	79142782	79122306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.8	chr17	-	6382	36	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.2017006049581	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAGAGCATTCATACAG	NA	False	NA	NA	False	AATAAA	-16	NA	79142794	79060334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069657_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15754.9	chr17	-	6452	36	NNC	ENSMUSG00000039414.11	novel	6388	36	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.8832287104354	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAGAGCATTCATACAG	NA	False	NA	NA	False	AATAAA	-16	NA	79142808	79060334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099063_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ES.15755.1	chr17	+	5210	6	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-30	1	intron_retention	FALSE	canonical	3	101	junction_2	14.4637477854116	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAGTGATGTGGCATTG	8800	False	NA	9	True	AATACA	-21	NA	79142965	79152788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ES.15755.10	chr17	+	2850	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-10	-1252	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAGCAGAGTTGACCG	8842	False	NA	NA	False	NA	NA	NA	79143007	79154485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153759_79153800
ES.15755.11	chr17	+	3145	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.0214871780805	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATAGTTTCTGTGTA	8847	False	NA	NA	False	NA	NA	NA	79143012	79155728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79152659_79153435_79153617_79153697
ES.15755.12	chr17	+	4075	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAATAGTTTCTGTGT	8859	False	NA	NA	False	NA	NA	NA	79143024	79155727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153759_79153800
ES.15755.13	chr17	+	2724	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	2	-42	intron_retention	FALSE	canonical	3	101	junction_6	16.1897923087358	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTCTTACTTCCAAAT	8859	False	NA	-34	True	GATAAA	-23	NA	79143024	79152745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79151330_79152572
ES.15755.14	chr17	+	2793	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	3	-1252	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAGCAGAGTTGACCG	8860	False	NA	NA	False	NA	NA	NA	79143025	79154485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153600_79153680
ES.15755.15	chr17	+	4040	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	6	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTCTGTGTATGTGTGT	8863	False	NA	NA	False	TTTAAA	-5	NA	79143028	79155735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153608_79153688
ES.15755.16	chr17	+	1025	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	31	3078	26	-128	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGGGAAAGGAGGCCT	8883	False	NA	0	True	AATAAA	-16	NA	79143048	79152659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ES.15755.2	chr17	+	1240	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-51	2945	-29	5	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGTGGCATTGTGAC	8801	False	NA	13	True	AATACA	-25	NA	79142966	79152792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ES.15755.4	chr17	+	2099	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-27	2	intron_retention	FALSE	canonical	3	101	junction_5	16.2591320494053	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGATGTGGCATTGT	8803	False	NA	10	True	AATACA	-22	NA	79142968	79152789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ES.15755.5	chr17	+	3191	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-12	-896	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGTGACCATTCAAGT	8818	False	NA	NA	False	AATAAA	-18	NA	79142983	79154841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153617_79153697
ES.15755.6	chr17	+	4942	10	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	-12	-9	intron_retention	FALSE	non_canonical	0	0	junction_9	42.7914840956832	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATAGTTTCTGTGTA	8818	False	NA	NA	False	NA	NA	NA	79142983	79155728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153617_79153697
ES.15755.7	chr17	+	2828	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	-1247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAGTTGACCGGTCGA	8830	False	NA	NA	False	NA	NA	NA	79142995	79154490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153617_79153697
ES.15755.8	chr17	+	5620	9	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	7	-901	intron_retention	FALSE	non_canonical	0	0	junction_8	45.2320406349305	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTTCTGGTGACCATT	8837	False	NA	NA	False	AATAAA	-13	NA	79143002	79154836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79147549_79148391_79148513_79148647_79148739_79149541_79151330_79152572_79153617_79153697
ES.15755.9	chr17	+	3210	11	NNC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	7	-897	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	40.8783561313319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGGTGACCATTCAAG	8837	False	NA	NA	False	AATAAA	-17	NA	79143002	79154840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572_79153829_79153870
ES.15756.1	chr17	-	768	2	Antisense	novelGene_ENSMUSG00000050668.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTAGGGTTTAGTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	79149071	79148233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_79148774_79148843
ES.15757.1	chr17	+	627	5	NNC	ENSMUSG00000062691.11	novel	602	5	NA	NA	-34477	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	692.465657993232	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAATAACGTGTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	79189451	79227727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79189511_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.10	chr17	+	1459	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	35	-741	35	741	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACAGTTTTGAATCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	79223980	79228476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.11	chr17	+	1541	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	78	-733	78	733	intron_retention	FALSE	canonical	3	300	junction_1	605.503647112605	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCACCTACAGTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	79224023	79228468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187
ES.15757.12	chr17	+	928	5	NIC	ENSMUSG00000062691.11	novel	443	2	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	686.839500902503	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79224131	79227729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79224490_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.13	chr17	+	1230	3	NIC	ENSMUSG00000062691.11	novel	602	5	NA	NA	1655	-6	intron_retention	FALSE	canonical	3	1604	junction_1	11.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79225783	79227729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79225902_79226484_79227273_79227405
ES.15757.2	chr17	+	1341	1	Intergenic	novelGene_13127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTTCAGAATCTATAAC	NA	False	NA	NA	False	NA	NA	NA	79202722	79204063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_79202700_79204100
ES.15757.3	chr17	+	1380	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	-37	-741	-37	741	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACAGTTTTGAATCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	79223891	79228476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.4	chr17	+	621	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	-22	3	-22	-3	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACGTGTGTGGGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	79223906	79227732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.5	chr17	+	762	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	-15	6	2	-6	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79223930	79227729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ES.15757.6	chr17	+	726	4	ISM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	3	6	3	-6	intron_retention	FALSE	canonical	3	686	junction_1	423.636112194836	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79223931	79227729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187
ES.15757.7	chr17	+	613	5	NNC	ENSMUSG00000062691.11	novel	602	5	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	671.584134714333	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	79223931	79227729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79223955_79225785_79225902_79226464_79226530_79227187_79227273_79227405
ES.15757.8	chr17	+	3182	4	ISM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	6	-2453	6	2453	intron_retention	FALSE	canonical	3	686	junction_1	423.636112194836	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTGTCTATAGTTCTT	NA	False	NA	NA	False	TTTAAA	-18	NA	79223934	79230188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187
ES.15757.9	chr17	+	2703	6	NNC	ENSMUSG00000062691.11	novel	602	5	NA	NA	8	4071	intron_retention	FALSE	canonical	0	0	junction_5	708.899315841114	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAAGCAATATATCAA	NA	False	NA	NA	False	ATTAAA	-3	NA	79223936	79231806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79228707_79228831_79229490
ES.15758.1	chr17	-	3334	1	FSM	ENSMUSG00000091549.2	ENSMUST00000167498.2	1165	1	-236	-1933	-236	1933	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGTCTCTTCTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	79159621	79156287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79156300_79159600
ES.15758.10	chr17	-	2549	17	NNC	ENSMUSG00000024079.5	novel	4313	16	NA	NA	1	843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.6933526464418	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTCTGCAATAGGGT	NA	False	NA	-9	True	ATTAAA	-17	NA	79189976	79161939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79188847_79189057_79189828
ES.15758.11	chr17	-	713	4	FSM	ENSMUSG00000024079.5	ENSMUST00000171852.2	704	4	-17	8	8	-8	multi-exon	FALSE	canonical	3	45	junction_1	9.80929264637478	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGAATGTGGTTCCTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	79189994	79181214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79181509_79183610_79183732_79185570_79185703_79189828
ES.15758.2	chr17	-	6384	16	FSM	ENSMUSG00000091549.2_ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	-11	-2060	-11	288	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	NA	False	NA	2	True	ATTAAA	-18	NA	79190013	79157932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ES.15758.3	chr17	-	7856	16	Fusion	ENSMUSG00000091549.2_ENSMUSG00000024079.5	novel	4313	16	NA	NA	2764	288	multi-exon	FALSE	canonical	0	0	junction_13	21.3493689732403	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	NA	False	NA	2	True	ATTAAA	-18	NA	79187213	79157932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79182586_79182733_79183610_79183732_79185570
ES.15758.4	chr17	-	4688	2	Fusion	ENSMUSG00000091549.2_ENSMUSG00000024079.5	novel	4313	16	NA	NA	-3305	285	multi-exon	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	NA	False	NA	-1	True	ATTAAA	-15	NA	79162690	79157935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_-_79162101_79162167
ES.15758.5	chr17	-	4289	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	32	-8	7	8	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTCTCTTAAGTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	79189970	79159984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ES.15758.7	chr17	-	3774	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	7	532	7	-532	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGTAATAAAATGGTAC	NA	False	NA	NA	False	AAAAAG	-12	NA	79189995	79160524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ES.15758.8	chr17	-	3731	17	NNC	ENSMUSG00000024079.5	novel	4313	16	NA	NA	37	-604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.6933526464418	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGGGTAACATTTGAAA	NA	False	NA	NA	False	NA	NA	NA	79189940	79160596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79186359_79186444_79189828
ES.15758.9	chr17	-	4442	16	FSM	ENSMUSG00000038045.15_ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	-2069	1940	-2069	850	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAATAGGGTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	79192071	79161932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ES.15759.1	chr17	-	4507	1	NIC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	5709	12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTCAGTGTGTTGT	NA	False	NA	-4	True	ATTAAA	-28	NA	79196820	79192313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79192300_79196800
ES.15759.13	chr17	-	4703	8	NNC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	-9003	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.4493439375164	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTGCTGTCAGTGTGT	NA	False	NA	-7	True	ATTAAA	-25	NA	79223424	79192316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79196359_79196517_79198274_79199066_79199107_79202099_79204986_79205077_79212937_79213051_79222992_79223159_79223358
ES.15759.14	chr17	-	2138	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	3134	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	103.708994574027	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTGCTGTCAGTGTG	NA	False	NA	-8	True	ATTAAA	-24	NA	79199395	79192317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79196359_79196517_79197658_79199066_79199149
ES.15759.16	chr17	-	548	2	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	9576	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	0	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGGAACATTGCTGT	NA	False	NA	-15	True	ATTAAA	-17	NA	79192953	79192324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79192726
ES.15759.18	chr17	-	1121	9	NNC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	-8991	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	86.4637749291575	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGAATTGGAACATTGC	NA	False	NA	-18	True	ATTAAA	-14	NA	79223412	79192327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79204986_79205077_79212287_79212350_79212937_79213051_79223053_79223159_79223358
ES.15759.19	chr17	-	8075	2	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	1	-1896	intron_retention	TRUE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAAAGTTC	NA	False	NA	NA	False	ATTAAA	-36	NA	79202528	79194390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79199066_79199128
ES.15759.2	chr17	-	775	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	-1	-10	-1	10	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202530	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
ES.15759.20	chr17	-	4709	3	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-99	-1900	intron_retention	FALSE	canonical	3	19	junction_2	79.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	79202628	79194394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79196517_79198274_79198370_79200136
ES.15759.21	chr17	-	4470	3	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	1165	-2600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAAACTTCTTCCCCC	NA	False	NA	NA	False	AATAAA	-28	NA	79201364	79195094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79196517_79198274_79199066_79199107
ES.15759.22	chr17	-	3168	1	NIC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	4267	-2600	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAAACTTCTTCCCCC	NA	False	NA	NA	False	AATAAA	-28	NA	79198262	79195094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79195100_79198300
ES.15759.23	chr17	-	5989	2	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-99	-4082	intron_retention	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGCCTCTGTGAATCCC	NA	False	NA	NA	False	AATAAA	-28	NA	79202628	79196576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79199045_79199107
ES.15759.24	chr17	-	5905	2	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	-4088	intron_retention	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATCTCGGCCTCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	79202529	79196582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79199066_79199107
ES.15759.25	chr17	-	2576	1	NIC	ENSMUSG00000038045.15	novel	2060	7	NA	NA	-1	-7460	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTCACACCACAGAAC	NA	False	NA	NA	False	NA	NA	NA	79202530	79199954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79200000_79202500
ES.15759.26	chr17	-	166	1	Intergenic	novelGene_13128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATGGGATTTGGA	NA	False	NA	NA	False	NA	NA	NA	79222927	79222761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_79222800_79222900
ES.15759.3	chr17	-	837	5	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.6661206299171	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202527	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202399
ES.15759.4	chr17	-	2829	3	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-11	10	intron_retention	FALSE	canonical	3	19	junction_2	1	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202540	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79198274_79198370_79200136
ES.15759.6	chr17	-	955	2	NIC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-67	10	intron_retention	FALSE	canonical	3	29	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202596	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79192646_79201971
ES.15759.7	chr17	-	3024	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-49	10	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202578	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
ES.15759.8	chr17	-	4544	3	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-1	10	intron_retention	TRUE	non_canonical	0	0	junction_2	10.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202530	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79192646_79198274_79199066_79199107
ES.15759.9	chr17	-	1039	3	NIC	ENSMUSG00000038045.15	novel	764	5	NA	NA	-56	10	intron_retention	FALSE	canonical	3	21	junction_1	60	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTGTCAGTGTGTT	NA	False	NA	-6	True	ATTAAA	-26	NA	79202585	79192315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79192646_79198274_79198370_79201971
ES.1576.1	chr1	-	3437	1	Antisense	novelGene_ENSMUSG00000026483.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATGAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151523860	151520423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_151520400_151523900
ES.15760.1	chr17	-	4103	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	-30	-3	-30	3	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTCTATTAGCATTTT	NA	False	NA	0	True	ATTAAA	-43	NA	79244525	79226431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.11	chr17	-	3033	16	FSM	ENSMUSG00000024081.10	ENSMUST00000233484.2	2920	16	-14	-99	11	99	multi-exon	FALSE	canonical	0	0	junction_14	165.681810173061	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244484	79227174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242289_79243497_79244303
ES.15760.12	chr17	-	3926	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-8	99	intron_retention	FALSE	canonical	3	573	junction_9	41.2651950986617	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244478	79227174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79239771_79242003_79243497_79244303
ES.15760.13	chr17	-	5177	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	67	99	intron_retention	FALSE	canonical	3	465	junction_12	59.4313615416463	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244399	79227174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.14	chr17	-	3072	16	NNC	ENSMUSG00000024081.10	novel	2920	16	NA	NA	-18	99	intron_retention	FALSE	non_canonical	0	0	junction_14	165.681810173061	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244513	79227174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239781_79242289_79243497_79244303
ES.15760.15	chr17	-	3948	14	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-14	96	intron_retention	FALSE	canonical	3	465	junction_11	61.5412499368268	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTGTCATTTATAAA	NA	False	NA	-41	True	AATAAA	-11	NA	79244509	79227177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.16	chr17	-	3516	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	10	96	intron_retention	FALSE	canonical	3	465	junction_12	59.5380601988753	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTGTCATTTATAAA	NA	False	NA	-41	True	AATAAA	-11	NA	79244485	79227177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.17	chr17	-	3379	16	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-1	96	intron_retention	FALSE	canonical	0	0	junction_4	165.012996121181	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTACTGTCATTTATAAA	NA	False	NA	-41	True	AATAAA	-11	NA	79244496	79227177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229202_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.18	chr17	-	1989	16	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	2217	94	intron_retention	FALSE	canonical	0	0	junction_12	218.339328161974	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTACTGTCATTTATA	NA	False	NA	-43	True	AATAAA	-9	NA	79242249	79227179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238092_79238196_79238738_79238926_79239538_79239771_79242003
ES.15760.2	chr17	-	4266	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	5	2	intron_retention	FALSE	canonical	3	465	junction_12	59.5380601988753	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGTCTATTAGCATTT	NA	False	NA	-1	True	ATTAAA	-42	NA	79244490	79226432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.22	chr17	-	3198	16	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	14	92	intron_retention	FALSE	canonical	0	0	junction_14	165.681810173061	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGTACTGTCATTTA	NA	False	NA	-45	True	AATAAA	-7	NA	79244452	79227181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242085_79243497_79244303
ES.15760.23	chr17	-	2863	15	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	17	92	intron_retention	FALSE	canonical	0	0	junction_13	168.35793078184	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGTACTGTCATTTA	NA	False	NA	-45	True	AATAAA	-7	NA	79244449	79227181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79242185_79243497_79244303
ES.15760.24	chr17	-	3429	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-6	92	intron_retention	FALSE	canonical	3	465	junction_12	58.2524414833877	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGTACTGTCATTTA	NA	False	NA	-45	True	AATAAA	-7	NA	79244501	79227181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.25	chr17	-	3254	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	-18	834	-18	5	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGCTAGTCAACCAT	NA	False	NA	-1	True	AATAAA	-21	NA	79244513	79227268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.26	chr17	-	1654	4	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	318	5	intron_retention	FALSE	canonical	3	639	junction_3	27.6445694888204	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGCTAGTCAACCAT	NA	False	NA	-1	True	AATAAA	-21	NA	79229952	79227268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79229151_79229558
ES.15760.27	chr17	-	3304	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-2	5	intron_retention	FALSE	canonical	3	465	junction_12	57.4331910011226	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGCTAGTCAACCAT	NA	False	NA	-1	True	AATAAA	-21	NA	79244472	79227268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.29	chr17	-	4936	13	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	10	-1	intron_retention	FALSE	canonical	3	465	junction_10	62.1541542367756	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTAGTTTTTGCTAGTC	NA	False	NA	-7	True	AATAAA	-15	NA	79244485	79227274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79230001_79230664_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.30	chr17	-	1800	16	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	165.413824492795	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTAGTTTTTGCTAGTC	NA	False	NA	-7	True	AATAAA	-15	NA	79244505	79227274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79242126_79244372
ES.15760.31	chr17	-	3799	13	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	1516	-2	intron_retention	FALSE	canonical	3	465	junction_11	62.5284379746972	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTAGTTTTTGCTAGT	NA	False	NA	-8	True	AATAAA	-14	NA	79242950	79227275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79230001_79230664_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003
ES.15760.33	chr17	-	5084	3	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	1518	-3460	intron_retention	FALSE	canonical	3	465	junction_1	54	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCATTTTACGTGTATG	NA	False	NA	NA	False	NA	NA	NA	79242948	79235018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79238926_79239538_79239771_79242003
ES.15760.34	chr17	-	7525	2	NIC	ENSMUSG00000024081.10	novel	530	3	NA	NA	-10	-4590	intron_retention	FALSE	canonical	3	619	junction_1	0	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79244480	79236148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79243497_79244303
ES.15760.35	chr17	-	2697	5	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	5	9763	5	-4639	5prime_fragment	FALSE	canonical	3	465	junction_2	68.5579134746675	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	79244490	79236197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.4	chr17	-	4162	16	NNC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_11	164.8317121592	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGTCTATTAGCATTT	NA	False	NA	-1	True	ATTAAA	-42	NA	79244469	79226432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234365_79236603_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.5	chr17	-	4598	10	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	-4241	0	intron_retention	FALSE	canonical	3	573	junction_7	45.2542883855657	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCTATTAGCAT	NA	False	NA	-3	True	ATTAAA	-40	NA	79237654	79226434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706
ES.15760.6	chr17	-	5316	13	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	465	junction_10	63.5928891901882	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCTATTAGCAT	NA	False	NA	-3	True	ATTAAA	-40	NA	79244470	79226434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15760.7	chr17	-	3767	16	FSM	ENSMUSG00000024081.10	ENSMUST00000233484.2	2920	16	-10	-837	-10	-2	multi-exon	FALSE	canonical	0	0	junction_14	165.681810173061	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTAGTGTCTATTAGC	NA	False	NA	-5	True	ATTAAA	-38	NA	79244480	79226436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242289_79243497_79244303
ES.15760.8	chr17	-	3399	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	-31	702	-31	137	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGAAAGAATTCTTCCAT	NA	False	NA	0	True	TATAAA	-22	NA	79244526	79227136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ES.15761.1	chr17	+	1498	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	-25	276	-25	50	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCAGTGGTGGCGCATGC	NA	False	NA	74	True	AATAAA	-17	NA	79244539	79254652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.11	chr17	+	3364	8	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	3	-13	intron_retention	FALSE	canonical	3	388	junction_5	42.2673705385715	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAACATAAGTTTTCA	NA	False	NA	11	True	AATAAA	-20	NA	79244579	79254589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79244631_79244919_79245084_79245969_79247135_79249497_79249712_79250681_79250741_79251262_79252514_79253724_79253899_79254303
ES.15761.12	chr17	+	2577	8	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	5	-4	intron_retention	FALSE	canonical	3	388	junction_4	36.648356590935	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTTTTCAAACTAGTAT	NA	False	NA	20	True	AATAAA	-29	NA	79244581	79254598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.13	chr17	+	1386	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	146.290257728165	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATAAGTTTTCAAACTA	NA	False	NA	16	True	AATAAA	-25	NA	79244581	79254594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249509_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.14	chr17	+	1213	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	186.019380378882	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGTACCAAATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	79244583	79255361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251328_79252369_79252514_79253724_79253899_79255207
ES.15761.15	chr17	+	1362	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	138.577250373168	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAAGTAACATAAGTT	NA	False	NA	7	True	AATAAA	-16	NA	79244583	79254585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244606_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.16	chr17	+	2282	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	24	-557	1	4	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTCTGTAGAACTTTC	NA	False	NA	NA	False	GATAAA	-23	NA	79244588	79255485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.17	chr17	+	1297	9	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	4	-18	combination_of_known_splicesites	FALSE	canonical	1	12	junction_2	144.879637544411	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTGAAGTAACATAAGT	NA	False	NA	6	True	AATAAA	-15	NA	79244591	79254584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79244631_79244919_79245084_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.18	chr17	+	1551	9	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	154	333	-26	-7	3prime_fragment	FALSE	canonical	3	388	junction_5	38.719948024242	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTTTTCAAACTAG	NA	False	NA	17	True	AATAAA	-26	NA	79244718	79254595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.19	chr17	+	3373	7	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-18	5	intron_retention	FALSE	canonical	3	404	junction_4	34.7786652353933	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTCCTTATCAACTTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	79244726	79254933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.2	chr17	+	1750	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	1	-2	0	2	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTCCTTATCAACT	NA	False	NA	NA	False	AGTAAA	-14	NA	79244565	79254930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ES.15761.20	chr17	+	1226	9	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	214	53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	150.922113604998	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTCCAGGAGGAGCAAC	NA	False	NA	NA	False	AATAAA	-17	NA	79244958	79255414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79255207
ES.15761.3	chr17	+	2854	8	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	5	-9	intron_retention	FALSE	canonical	3	7	junction_5	162.299295206387	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACATAAGTTTTCAAACT	NA	False	NA	15	True	AATAAA	-24	NA	79244570	79254593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79251328_79252369_79252514_79253724_79253899_79254303
ES.15761.4	chr17	+	1415	10	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	144.693375244018	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTTTTCAAACTAG	NA	False	NA	17	True	AATAAA	-26	NA	79244571	79254595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252520_79253724_79253899_79254303
ES.15761.5	chr17	+	7032	7	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	-4	-17	intron_retention	FALSE	non_canonical	0	0	junction_3	222.225611085271	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAAGTAACATAAGTT	NA	False	NA	7	True	AATAAA	-16	NA	79244572	79254585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79244631_79244919_79245084_79245969_79248096_79248244_79249252_79249292_79252514_79253724_79253899_79254303
ES.15761.6	chr17	+	1817	1	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	0	1003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGTGGAAACATGTG	NA	False	NA	NA	False	NA	NA	NA	79244576	79246393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79244600_79246400
ES.15761.8	chr17	+	986	1	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	1	173	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	AAGAAA	-19	NA	79244577	79245563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79244600_79245600
ES.15761.9	chr17	+	3893	7	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	1	-5	intron_retention	FALSE	canonical	3	397	junction_1	36.754818278243	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTTTTCAAACTAGTA	NA	False	NA	19	True	AATAAA	-28	NA	79244577	79254597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79252514_79253724_79253899_79254303
ES.15762.1	chr17	-	5952	20	NNC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.1785341641363	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTATGTGAAAACCTT	NA	False	NA	1	True	AATAAA	-22	NA	79328255	79256833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79280122_79280178_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.10	chr17	-	4935	18	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-11	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	48.2894960889628	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTTTCCTATGTGAA	NA	False	NA	-5	True	AATAAA	-16	NA	79328217	79256839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79328113
ES.15762.14	chr17	-	5889	19	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	48.5260525674382	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTTTCCTATGTGAA	NA	False	NA	-5	True	AATAAA	-16	NA	79328262	79256839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259451_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.15	chr17	-	3562	8	NNC	ENSMUSG00000024070.16	novel	5517	18	NA	NA	23542	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.8634243989226	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTTTCCTATGTGAA	NA	False	NA	-5	True	AATAAA	-16	NA	79269335	79256839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269188
ES.15762.16	chr17	-	6245	19	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-9	-8	combination_of_known_junctions	FALSE	canonical	3	70	junction_11	40.3060820089671	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATACTTTCCTATGTG	NA	False	NA	-7	True	AATAAA	-14	NA	79328254	79256841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.18	chr17	-	5842	19	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	18	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.426588536141	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTTCTCTATCACCAT	NA	False	NA	-20	True	AATAAA	-1	NA	79328227	79256854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261908_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.19	chr17	-	4826	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-67	-16	-67	16	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79328312	79257961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.2	chr17	-	5939	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-53	-1143	-53	-1	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCCTATGTGAAAACCT	NA	False	NA	0	True	AATAAA	-21	NA	79328298	79256834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.21	chr17	-	4771	19	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-15	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.9946142164853	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79328260	79257961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259451_79260099_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.22	chr17	-	4812	20	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	9	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	56.7749115518241	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79328236	79257961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79266668_79266731_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.23	chr17	-	4848	20	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-34	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.1785341641363	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79328279	79257961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79280122_79280178_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.24	chr17	-	4641	19	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	63	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	48.5183241443661	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTCTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	79328143	79257961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273865_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.25	chr17	-	6668	9	NNC	ENSMUSG00000024070.16	novel	2847	18	NA	NA	16914	-13	intron_retention	FALSE	canonical	0	0	junction_8	41.5601973046327	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATATA	-35	NA	79275963	79257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79273865_79275468
ES.15762.26	chr17	-	7801	17	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-4	-13	intron_retention	FALSE	canonical	3	97	junction_5	38.1267929906254	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATATA	-35	NA	79328249	79257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.27	chr17	-	5069	19	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	18	-13	combination_of_known_junctions	FALSE	canonical	3	70	junction_11	40.3060820089671	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATATA	-35	NA	79328227	79257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.28	chr17	-	6717	18	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-15	-13	intron_retention	FALSE	canonical	3	97	junction_5	36.5162901506544	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATATA	-35	NA	79328260	79257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.30	chr17	-	4186	20	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-3	120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	57.662596795948	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGACTGTCTAGTTATTG	NA	False	NA	NA	False	TTTAAA	-4	NA	79328248	79258949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79279270_79279831_79280016_79280122_79280178_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.31	chr17	-	3735	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	35	973	-4	119	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGACTGTCTAGTTATT	NA	False	NA	NA	False	TTTAAA	-3	NA	79328210	79258950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.32	chr17	-	3674	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-15	1084	-15	8	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTTCTGTAATTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	79328260	79259061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.33	chr17	-	3607	19	NNC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	-15	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	48.1007494615773	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAACTGGTTCTGTAAT	NA	False	NA	NA	False	AATAAA	-37	NA	79328260	79259065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291024_79292643_79292783_79320052_79320971_79328113
ES.15762.34	chr17	-	3128	16	ISM	ENSMUSG00000024070.16	ENSMUST00000168887.8	5884	19	-16	6909	-16	-4673	5prime_fragment	FALSE	canonical	2	15	junction_5	50.9424075686347	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGAGGTTTCTTTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	79328261	79263742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.35	chr17	-	6396	1	NIC	ENSMUSG00000024070.16	novel	5517	18	NA	NA	21050	-6362	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATATTGTTGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	79271827	79265431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79265400_79271800
ES.15762.36	chr17	-	4274	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-43	75	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATATAACAGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	79328288	79276972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.37	chr17	-	3801	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	5	-350	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATTAGCCATTTGGGG	NA	False	NA	NA	False	AATAAA	-13	NA	79328240	79277397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.38	chr17	-	3696	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-29	-489	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTACAGATTACAGCTATA	NA	False	NA	52	True	AGTAAA	-18	NA	79328274	79277536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.4	chr17	-	5446	14	NIC	ENSMUSG00000024070.16	novel	2847	18	NA	NA	3555	-1	intron_retention	FALSE	canonical	3	97	junction_5	36.2749200203833	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCCTATGTGAAAACCT	NA	False	NA	0	True	AATAAA	-21	NA	79289322	79256834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79280016_79282163_79282242_79282803_79282997_79289202
ES.15762.40	chr17	-	3904	2	ISM	ENSMUSG00000024070.16	ENSMUST00000146917.2	1214	8	32475	-2114	9235	-543	intron_retention	FALSE	canonical	3	169	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTGTTTAATATATT	NA	False	NA	-2	True	NA	NA	NA	79283642	79277590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79280016_79282163
ES.15762.41	chr17	-	3557	9	NNC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-49	-543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	70.1101811436827	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTGTTTAATATATT	NA	False	NA	-2	True	NA	NA	NA	79328294	79277590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320866_79328113
ES.15762.42	chr17	-	3690	10	NNC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	-22	-543	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.7282458690966	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTGTTTAATATATT	NA	False	NA	-2	True	NA	NA	NA	79328267	79277590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79279270_79279831_79280016_79280122_79280178_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.43	chr17	-	2224	9	NIC	ENSMUSG00000024070.16	novel	3201	7	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGTGAGGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	79328252	79278986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.44	chr17	-	2244	10	NNC	ENSMUSG00000024070.16	novel	1214	8	NA	NA	-35	-308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.9997256511594	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATTTATTTTTCTGCCT	NA	False	NA	NA	False	AGTAAA	-14	NA	79328280	79279291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79279512_79279831_79280016_79280122_79280178_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.45	chr17	-	2116	8	ISM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	-9	21681	-9	46	5prime_fragment	FALSE	canonical	3	169	junction_1	19.5375097111757	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGGTAGAAAGCAAGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	79328254	79279658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.46	chr17	-	176	1	Intergenic	novelGene_13129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	79297188	79297012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_79297000_79297200
ES.15762.47	chr17	-	6531	2	Genic_Genomic	ENSMUSG00000024070.16	novel	2847	18	NA	NA	-198	7877	multi-exon	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAACTGAACAGGCT	NA	False	NA	NA	False	NA	NA	NA	79316315	79309678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_79313366_79313471
ES.15762.48	chr17	-	3561	2	FSM	ENSMUSG00000024070.16	ENSMUST00000130070.2	3508	2	-53	0	-14	0	multi-exon	FALSE	canonical	3	186	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTGGTTTGTCAGTT	NA	False	NA	NA	False	TTTAAA	-36	NA	79328259	79317555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79320971_79328113
ES.15762.49	chr17	-	2925	2	FSM	ENSMUSG00000024070.16	ENSMUST00000130070.2	3508	2	-62	645	-23	-645	multi-exon	FALSE	canonical	3	186	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGCTACATGAGCTA	NA	False	NA	NA	False	NA	NA	NA	79328268	79318200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79320971_79328113
ES.15762.50	chr17	-	1162	2	FSM	ENSMUSG00000024070.16	ENSMUST00000130070.2	3508	2	-60	2406	-21	-2406	multi-exon	FALSE	canonical	3	186	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTGGACTCATCAGT	NA	False	NA	NA	False	CATAAA	-12	NA	79328266	79319961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79320971_79328113
ES.15762.7	chr17	-	8030	18	NIC	ENSMUSG00000024070.16	novel	4743	19	NA	NA	0	-5	intron_retention	FALSE	canonical	3	97	junction_5	37.2088466617308	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACTTTCCTATGTGAAA	NA	False	NA	-4	True	AATAAA	-17	NA	79328245	79256838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ES.15762.8	chr17	-	3705	8	NNC	ENSMUSG00000024070.16	novel	5517	18	NA	NA	23553	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	42.8680938389819	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTTTCCTATGTGAA	NA	False	NA	-5	True	AATAAA	-16	NA	79269324	79256839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269034
ES.15763.1	chr17	+	1995	9	NNC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	-25	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	111.189520077209	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTATTGCCTCTTTGT	NA	False	NA	3	True	AATATA	-19	NA	79359591	79397812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79389463_79389531_79396783_79396905_79397051
ES.15763.10	chr17	+	1572	8	NNC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	73	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.523993925426	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACAGCCTTTAAGTT	NA	False	NA	-55	True	AATAAA	-13	NA	79359689	79397584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79389439_79389531_79397051
ES.15763.11	chr17	+	710	1	NIC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	76	-28880	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGCTTTGTGTGAAGAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	79359692	79360402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79359700_79360400
ES.15763.12	chr17	+	1548	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	85	-160	85	3	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTATTGCCTCTTT	NA	False	NA	1	True	AATATA	-17	NA	79359701	79397810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.13	chr17	+	1600	8	NNC	ENSMUSG00000024084.9	novel	864	3	NA	NA	10990	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	112.542599644285	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGAATTTATTTTCA	NA	False	NA	8	True	ATTAAA	-17	NA	79370606	79397647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79370670_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79396783_79396905_79397051
ES.15763.15	chr17	+	1641	7	NNC	ENSMUSG00000024084.9	novel	864	3	NA	NA	10991	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	82.476259210353	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTATTGCCTCTTT	NA	False	NA	1	True	AATATA	-17	NA	79370607	79397810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79370670_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.16	chr17	+	1993	5	ISM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	17761	3	-7053	-3	3prime_fragment	FALSE	canonical	3	230	junction_3	5.2618912949623	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGAATTTATTTTCA	NA	False	NA	8	True	ATTAAA	-17	NA	79377377	79397647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.2	chr17	+	1470	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	24	-21	24	21	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATGAGAAAGTGTCTG	NA	False	NA	32	True	ATTAAA	-41	NA	79359640	79397671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.3	chr17	+	1640	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	307	112	25	45	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGGTCCAGTTTTCT	NA	False	NA	56	True	CATAAA	-19	NA	79359641	79397695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.4	chr17	+	3096	1	NIC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	25	-26545	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACCACCTACAATCTCA	NA	False	NA	NA	False	AAAACA	-40	NA	79359641	79362737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_79359600_79362700
ES.15763.5	chr17	+	1358	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	313	388	31	-231	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCTTTTGGATTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	79359647	79397419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.6	chr17	+	1701	7	NNC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	39	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	86.1948696591366	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTATTGCCTCTTTGT	NA	False	NA	3	True	AATATA	-19	NA	79359655	79397812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79359818_79371398_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.7	chr17	+	1726	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	338	-5	56	5	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTATTGCCTCTTTGT	NA	False	NA	3	True	AATATA	-19	NA	79359672	79397812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ES.15763.8	chr17	+	1778	8	NNC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	103.849970276985	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAATAACTATTGCCTC	NA	False	NA	-2	True	AATATA	-14	NA	79359682	79397807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79389463_79389531_79397051
ES.15763.9	chr17	+	1614	8	NNC	ENSMUSG00000024084.9	novel	2059	7	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	103.849970276985	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAATTTATTTTCATG	NA	False	NA	10	True	ATTAAA	-19	NA	79359688	79397649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79389463_79389531_79397051
ES.15764.1	chr17	-	2490	3	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	34	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTGTTCATTTATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	79662486	79641151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79647843_79648099_79662245
ES.15764.10	chr17	-	4444	1	NIC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	14121	-716	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAGTGAGTCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	79646315	79641871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_79641900_79646300
ES.15764.11	chr17	-	1325	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	7402	-716	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAGTGAGTCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	79653034	79641871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79652983
ES.15764.12	chr17	-	1399	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10302	-716	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAGTGAGTCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	79650134	79641871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79650009
ES.15764.13	chr17	-	3035	1	Genic_Genomic	ENSMUSG00000036533.10	novel	NA	NA	NA	NA	-802	-17662	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTTGGTTTTTATTG	NA	False	NA	NA	False	AGTAAA	-17	NA	79663322	79660287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_79660300_79663300
ES.15764.2	chr17	-	2151	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	-584	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAACGTGTTCATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	79663104	79641154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79662944
ES.15764.3	chr17	-	1943	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10256	-218	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGGCTTCCTTGCAAGC	NA	False	NA	50	True	AATACA	-25	NA	79650180	79641373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79650009
ES.15764.4	chr17	-	2639	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-595	221	-595	-221	multi-exon	FALSE	canonical	3	71	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCGGGCTTCCTTGCA	NA	False	NA	47	True	AATACA	-22	NA	79663115	79641376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79643146_79662245
ES.15764.5	chr17	-	2046	3	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10235	-273	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAAGTCTACATTTTA	NA	False	NA	-5	True	AATATA	-24	NA	79650201	79641428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79648962_79649100_79650009
ES.15764.6	chr17	-	2248	4	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10283	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTGCAAAGTCTACA	NA	False	NA	-10	True	AATATA	-19	NA	79650153	79641433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79647843_79648099_79648962_79649100_79650009
ES.15764.7	chr17	-	2133	3	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	-572	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTGCAAAGTCTACA	NA	False	NA	-10	True	AATATA	-19	NA	79663092	79641433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_79643146_79662245_79662519_79662944
ES.15764.8	chr17	-	2269	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-550	546	-550	-546	multi-exon	FALSE	canonical	3	71	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCCTTTTTTTCCTAGCC	NA	False	NA	NA	False	NA	NA	NA	79663070	79641701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79643146_79662245
ES.15764.9	chr17	-	2395	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-846	716	-846	-716	multi-exon	FALSE	canonical	3	71	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAGTGAGTCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	79663366	79641871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_79643146_79662245
ES.15765.1	chr17	-	2602	6	Intergenic	novelGene_13130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCAAAGTGGTTTCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	79684354	79669447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_79670942_79671986_79672116_79675621_79675795_79678393_79678802_79679937_79680252_79684270
ES.15766.1	chr17	+	2721	11	FSM	ENSMUSG00000036368.9	ENSMUST00000225357.2	2118	11	-39	-564	-39	564	multi-exon	FALSE	canonical	1	2	junction_3	2.75862284482674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGAGTATGTCTTTT	3541	False	NA	NA	False	AATAAA	-19	NA	79922451	79990242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79922798_79928734_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979778_79979833_79979921_79980003_79989061
ES.15766.2	chr17	+	1693	11	FSM	ENSMUSG00000036368.9	ENSMUST00000225357.2	2118	11	166	259	166	-162	multi-exon	FALSE	canonical	1	2	junction_3	2.75862284482674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTATTGTTTCACTA	3746	False	NA	NA	False	AATAAA	-13	NA	79922656	79989419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_79922798_79928734_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979778_79979833_79979921_79980003_79989061
ES.15767.1	chr17	+	161	1	Intergenic	novelGene_13131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	80084332	80084493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80084300_80084500
ES.15768.1	chr17	+	284	1	Intergenic	novelGene_13132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGAGCTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	80165048	80165332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80165000_80165300
ES.15769.1	chr17	+	5774	2	Antisense	novelGene_ENSMUSG00000059811.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5203	False	NA	NA	False	NA	NA	NA	80189224	80198563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80189781_80193345
ES.1577.1	chr1	-	198	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGAAAGCTATT	NA	False	NA	NA	False	NA	NA	NA	151533680	151533482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151533500_151533700
ES.15770.1	chr17	-	4037	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	69	-488	-3	488	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTTTTTTGCTTTCTTT	3820	False	NA	NA	False	ATTAAA	-18	NA	80203483	80155330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.10	chr17	-	3123	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	-173	668	-173	5	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGATTCTTTTTTAAGG	3578	False	NA	NA	False	ATTAAA	-26	NA	80203725	80156486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.12	chr17	-	5122	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	301	junction_4	43.1156430740161	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3820	False	NA	NA	False	ATTAAA	-21	NA	80203483	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.13	chr17	-	5994	5	NIC	ENSMUSG00000059811.14	novel	2902	13	NA	NA	-5058	0	intron_retention	FALSE	canonical	3	301	junction_2	18.2534243362718	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	5194	False	NA	NA	False	ATTAAA	-21	NA	80168617	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531
ES.15770.14	chr17	-	5245	11	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	335	junction_5	37.9906567461001	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3820	False	NA	NA	False	ATTAAA	-21	NA	80203483	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.15	chr17	-	8161	10	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	301	junction_4	44.1036937508542	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80163693_80164536_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.16	chr17	-	2866	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_8	102.287856344512	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3820	False	NA	NA	False	ATTAAA	-21	NA	80203483	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168579_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.17	chr17	-	3391	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3820	False	NA	NA	False	ATTAAA	-21	NA	80203483	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.18	chr17	-	8693	9	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	336	junction_7	38.520895303718	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3841	False	NA	NA	False	ATTAAA	-21	NA	80203462	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80164676_80167215_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.19	chr17	-	2846	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	96.5253360308462	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3778	False	NA	NA	False	ATTAAA	-21	NA	80203525	80156491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80157708_80159953_80160386_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.2	chr17	-	3692	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	-33	-41	-33	41	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCCTTTTTTTTTCTTT	3718	False	NA	39	True	ATTAAA	-22	NA	80203585	80155777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.21	chr17	-	2628	12	FSM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	69	674	-3	-3	multi-exon	FALSE	canonical	3	19	junction_11	103.456941975757	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3820	False	NA	NA	False	ATTAAA	-18	NA	80203483	80156494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ES.15770.22	chr17	-	3140	12	NIC	ENSMUSG00000059811.14	novel	2902	13	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	136.786737552469	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3823	False	NA	NA	False	ATTAAA	-18	NA	80203480	80156494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ES.15770.23	chr17	-	5333	11	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	17	-3	intron_retention	FALSE	canonical	3	301	junction_4	44.9587588796666	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAAAGTTGTGATTCTT	3840	False	NA	NA	False	ATTAAA	-18	NA	80203463	80156494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172606_80183230_80183476_80203337
ES.15770.24	chr17	-	3138	14	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.203283378921	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3841	False	NA	NA	False	ATTAAA	-17	NA	80203462	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80157938_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172467_80172606_80183230_80183476_80203337
ES.15770.25	chr17	-	2994	14	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.100554542388	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3820	False	NA	NA	False	ATTAAA	-17	NA	80203483	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80165775_80165898_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.26	chr17	-	3460	14	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.279212166196	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3822	False	NA	NA	False	ATTAAA	-17	NA	80203481	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80158223_80159143_80159219_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.27	chr17	-	4396	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	301	junction_4	41.2845397593396	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3821	False	NA	NA	False	ATTAAA	-17	NA	80203482	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.28	chr17	-	3683	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.863339462488	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3777	False	NA	NA	False	ATTAAA	-17	NA	80203526	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80160494_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.29	chr17	-	4512	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_12	136.254051927518	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3822	False	NA	NA	False	ATTAAA	-17	NA	80203481	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80195028_80195146_80203337
ES.15770.3	chr17	-	4101	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-2	38	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCCTCCTTTTTTTTTC	3821	False	NA	36	True	ATTAAA	-19	NA	80203482	80155780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.31	chr17	-	2837	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	134.638920408955	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3825	False	NA	NA	False	ATTAAA	-17	NA	80203478	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161995_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172148_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.32	chr17	-	2862	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	104.01669203653	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAAAGTTGTGATTCT	3822	False	NA	NA	False	ATTAAA	-17	NA	80203481	80156495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203345
ES.15770.34	chr17	-	6729	9	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	0	-5	intron_retention	FALSE	canonical	3	336	junction_7	40.4343603881649	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACGAAAGTTGTGATTC	3823	False	NA	NA	False	ATTAAA	-16	NA	80203480	80156496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80164676_80167215_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.37	chr17	-	1856	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	56	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_8	102.287856344512	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	3822	False	NA	-6	True	AATAAA	-16	NA	80203481	80157499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168579_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.38	chr17	-	2385	13	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-5	56	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	3818	False	NA	-6	True	AATAAA	-16	NA	80203485	80157499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.39	chr17	-	1867	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	70	1681	-2	56	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	3821	False	NA	-6	True	AATAAA	-16	NA	80203482	80157499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.4	chr17	-	3576	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-2	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.070289626705	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCCTCCTTTTTTTTTC	3821	False	NA	36	True	ATTAAA	-19	NA	80203482	80155780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159963_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.40	chr17	-	4018	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	18	-19	intron_retention	FALSE	canonical	3	301	junction_4	43.1156430740161	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCCACTCTCCCTT	3841	False	NA	-81	True	ATTAAA	-24	NA	80203462	80157574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.41	chr17	-	3474	3	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	14	11264	intron_retention	FALSE	canonical	3	336	junction_1	47	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCATGTGTGCATGTG	3777	False	NA	NA	False	NA	NA	NA	80203526	80169565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80172606_80183230_80183476_80203337
ES.15770.42	chr17	-	3195	4	ISM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	71	13747	-1	11264	5prime_fragment	FALSE	canonical	3	336	junction_2	38.5169515350781	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCATGTGTGCATGTG	3822	False	NA	NA	False	NA	NA	NA	80203481	80169565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.43	chr17	-	3190	1	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-9222	11238	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1030	False	NA	NA	False	NA	NA	NA	80172781	80169591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80169600_80172800
ES.15770.5	chr17	-	5702	11	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	61	junction_1	101.207163778065	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTTCTGAAATTAAA	3841	False	NA	-2	True	AATAAA	-18	NA	80203462	80155818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.6	chr17	-	8375	9	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	19	-1	intron_retention	FALSE	canonical	3	335	junction_4	41.0723447102792	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTGTTCTGAAATTAA	3842	False	NA	-3	True	AATAAA	-17	NA	80203461	80155819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172606_80183230_80183476_80203337
ES.15770.7	chr17	-	1937	10	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.195186881153	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTGTTCTGAAATTA	3822	False	NA	-4	True	AATAAA	-16	NA	80203481	80155820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80156228_80163131_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15770.8	chr17	-	10773	9	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	301	junction_3	34.8353268967007	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTGTTCTGAAATTA	3822	False	NA	-4	True	AATAAA	-16	NA	80203481	80155820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80160386_80161262_80161335_80161982_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80172606_80183230_80183476_80203337
ES.15770.9	chr17	-	4313	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.863339462488	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTGTTCTGAAATTA	3822	False	NA	-4	True	AATAAA	-16	NA	80203481	80155820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80157708_80159953_80160386_80160494_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ES.15771.1	chr17	-	383	1	FSM	ENSMUSG00000117458.2	ENSMUST00000234229.2	1061	1	880	-202	880	202	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	80241121	80240738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80240700_80241100
ES.15772.1	chr17	+	2533	1	Antisense	novelGene_ENSMUSG00000117458.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGGTATAAACTTTCT	8430	False	NA	NA	False	AATGAA	-20	NA	80241176	80243709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80241200_80243700
ES.15772.2	chr17	+	2360	2	Antisense	novelGene_ENSMUSG00000117458.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGGTATAAACTTTCT	8489	False	NA	NA	False	AATGAA	-20	NA	80241235	80243709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80241373_80241486
ES.15773.1	chr17	-	325	1	Intergenic	novelGene_13133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	80323985	80323660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80323700_80324000
ES.15774.1	chr17	-	4515	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-47	-1459	-6	1459	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAGCTGCTTTGAAA	3523	False	NA	10	True	AATAAA	-31	NA	80369703	80335456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.10	chr17	-	3101	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	3	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.75063475183	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGTTTCTTTCTCTTT	3573	False	NA	-31	True	NA	NA	NA	80369653	80336942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80343592_80343715_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.12	chr17	-	3112	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	-7	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.271661377061	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTGTTTCTTTCTCTT	3522	False	NA	-32	True	NA	NA	NA	80369704	80336943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.13	chr17	-	9858	12	NIC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	-5	-70	intron_retention	FALSE	canonical	0	0	junction_8	218.121241590676	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATTTGTCTCAACAC	3458	False	NA	5	True	NA	NA	NA	80369768	80336985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80346239_80351922_80351995_80352368_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.14	chr17	-	2844	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	13	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	206.28156204624	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATTTGTCTCAA	3583	False	NA	2	True	NA	NA	NA	80369643	80336988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085_80369206_80369284
ES.15774.17	chr17	-	2814	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	-140	335	-33	15	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATTTTGCATGTGACC	3430	False	NA	NA	False	TATAAA	-30	NA	80369796	80337250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.2	chr17	-	3443	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-1	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGACGTTGTTTCTAAT	3528	False	NA	NA	False	NA	NA	NA	80369698	80336523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.22	chr17	-	2812	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	28	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.271661377061	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAAGTTAATGTGTTC	3491	False	NA	NA	False	TATAAA	-6	NA	80369735	80337274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.23	chr17	-	5779	12	NIC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	10	-9	intron_retention	FALSE	canonical	0	0	junction_8	165.531700292279	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAAGTTAATGTGTTC	3580	False	NA	NA	False	TATAAA	-6	NA	80369646	80337274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.24	chr17	-	2442	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	10	557	10	-207	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGAATGACGCTGC	3580	False	NA	NA	False	ATTAAA	-26	NA	80369646	80337472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.27	chr17	-	2513	14	FSM	ENSMUSG00000024095.16	ENSMUST00000184297.8	2742	14	18	211	-15	-211	multi-exon	FALSE	canonical	0	0	junction_10	238.271661377061	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATTTGAGAATGACG	3588	False	NA	NA	False	ATTAAA	-22	NA	80369638	80337476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.28	chr17	-	2286	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-8	156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCTGCAGATGTTTTT	3595	False	NA	NA	False	AATATA	-18	NA	80369631	80337613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.29	chr17	-	2250	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTGTTAACTTAAA	3477	False	NA	-2	True	AATAAA	-18	NA	80369749	80337767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.30	chr17	-	6186	12	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	13	2	intron_retention	FALSE	non_canonical	0	0	junction_8	166.515529268604	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTGTTAACTTAAA	3583	False	NA	-2	True	AATAAA	-18	NA	80369643	80337767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.31	chr17	-	2217	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.271661377061	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTTGTTAACTTAAA	3593	False	NA	-2	True	AATAAA	-18	NA	80369633	80337767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.33	chr17	-	3575	14	NNC	ENSMUSG00000024095.16	novel	2742	14	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	261.473453459248	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTTGTTAACTTA	3477	False	NA	-4	True	AATAAA	-16	NA	80369749	80337769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80343266_80345160_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.38	chr17	-	2084	13	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	212.701473118234	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTAAGTTTGTTGTTAA	3559	False	NA	-8	True	AATAAA	-12	NA	80369667	80337773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346098_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.39	chr17	-	2011	10	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	10	3326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	179.319977473196	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGCCAGTGGTGTG	3580	False	NA	NA	False	ATTAAA	-18	NA	80369646	80341251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.40	chr17	-	5190	6	FSM	ENSMUSG00000024095.16	ENSMUST00000184889.2	4651	6	-176	-363	23	363	multi-exon	FALSE	canonical	0	0	junction_2	229.055975691533	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTCATATTTCTTTT	3486	False	NA	NA	False	TTTAAA	-29	NA	80369740	80352114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.41	chr17	-	4664	6	NNC	ENSMUSG00000024095.16	novel	4651	6	NA	NA	30	44	intron_retention	FALSE	non_canonical	0	0	junction_2	229.055975691533	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTTCTTGAAAGAAGC	3692	False	NA	NA	False	AATACA	-20	NA	80369534	80352433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80356110_80356193_80356288_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.42	chr17	-	3689	6	NNC	ENSMUSG00000024095.16	novel	4651	6	NA	NA	-10	-1031	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.055975691533	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGTGATTACATTTTAT	3593	False	NA	NA	False	ATTAAA	-18	NA	80369633	80353508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.43	chr17	-	2500	7	NNC	ENSMUSG00000024095.16	novel	4651	6	NA	NA	19	-2390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	282.01108134256	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATATCTAAACTTGAT	3482	False	NA	NA	False	AATATA	-29	NA	80369744	80354867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360169_80360229_80360951_80361071_80369085
ES.15774.44	chr17	-	2329	6	NNC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	0	-2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.055975691533	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACGTGTCCTTTTCA	3570	False	NA	NA	False	AATATA	-5	NA	80369656	80354891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.45	chr17	-	2187	6	FSM	ENSMUSG00000024095.16	ENSMUST00000184889.2	4651	6	-73	2537	-14	-2537	multi-exon	FALSE	canonical	0	0	junction_2	229.055975691533	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTGTGTGGTTTGAT	3589	False	NA	NA	False	AATGAA	-24	NA	80369637	80355014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.48	chr17	-	177	1	Intergenic	novelGene_13134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80363066	80362889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80362900_80363100
ES.15774.49	chr17	-	1301	1	NIC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	20	-9779	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTTCATTCATAATGTA	3483	False	NA	NA	False	AATAAA	-19	NA	80369743	80368442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80368400_80369700
ES.15774.5	chr17	-	3138	13	NNC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	-28	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	159.429974178843	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCATACTAAGGCTG	3435	False	NA	-10	True	NA	NA	NA	80369791	80336921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356289_80357233_80357322_80358056_80358295_80360951_80361071_80369085
ES.15774.6	chr17	-	2208	1	NIC	ENSMUSG00000024095.16	novel	3009	13	NA	NA	3856	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCATACTAAGGCTG	NA	False	NA	-10	True	NA	NA	NA	80339129	80336921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80336900_80339100
ES.15775.1	chr17	+	221	1	Intergenic	novelGene_13135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80421305	80421526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80421300_80421500
ES.15776.1	chr17	-	163	1	Intergenic	novelGene_13136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80427920	80427757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80427800_80427900
ES.15777.2	chr17	+	2336	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	-20	-2	-20	2	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTCTTGTTCTTTTGTG	NA	False	NA	13	True	AATAAA	-21	NA	80434879	80492532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ES.15777.3	chr17	+	1847	6	NIC	ENSMUSG00000035473.11	novel	2314	7	NA	NA	312	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	55.9514074889989	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGACTCTTGTTCTTTTG	NA	False	NA	11	True	AATAAA	-19	NA	80435211	80492530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_80435335_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ES.15777.4	chr17	+	1879	6	ISM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	10541	1	-7140	-1	3prime_fragment	FALSE	canonical	3	126	junction_2	8.39047078536121	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGACTCTTGTTCTTTT	NA	False	NA	10	True	AATAAA	-18	NA	80445440	80492529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ES.15777.5	chr17	+	176	1	Intergenic	novelGene_13138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	80467512	80467688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80467500_80467700
ES.15778.1	chr17	-	286	1	Intergenic	novelGene_13137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACAGAACGA	9008	False	NA	NA	False	NA	NA	NA	80441628	80441342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80441300_80441600
ES.15779.1	chr17	+	173	1	Intergenic	novelGene_13139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAGAATCAC	NA	False	NA	NA	False	NA	NA	NA	80493695	80493868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80493700_80493900
ES.1578.1	chr1	+	173	1	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	151600170	151600343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151600200_151600300
ES.15780.1	chr17	+	223	1	Intergenic	novelGene_13140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAAGAGTAAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	80498393	80498616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80498400_80498600
ES.15781.1	chr17	+	180	1	Intergenic	novelGene_13141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	80500002	80500182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80500000_80500200
ES.15782.1	chr17	-	2311	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	-59	7	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTCTTTGGAAGTATG	NA	False	NA	-4	True	AATAAA	-30	NA	80514795	80507501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.10	chr17	-	2279	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	1	8	0	-8	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAATCCTGATATTCA	NA	False	NA	-19	True	AATAAA	-15	NA	80514733	80507516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.11	chr17	-	4036	7	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	813.58643602809	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514732	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80507573_80508064_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.12	chr17	-	2242	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	822.802257869748	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514733	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.13	chr17	-	2236	8	NNC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	796.010383482681	952	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511787_80512690_80512868_80513276_80513458_80514603
ES.15782.16	chr17	-	4493	5	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-9	intron_retention	FALSE	canonical	3	135	junction_1	912.614239424303	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514733	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.17	chr17	-	4348	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-9	intron_retention	FALSE	canonical	3	75	junction_4	786.026381378019	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514732	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.18	chr17	-	1825	3	NNC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1187.5	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514733	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509014_80513258_80513458_80514603
ES.15782.19	chr17	-	3104	6	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-9	intron_retention	FALSE	canonical	3	135	junction_1	856.009719570987	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.2	chr17	-	2282	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-2	-1240	0	3	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCAGTCTTTGGAAG	NA	False	NA	-8	True	AATAAA	-26	NA	80514734	80507505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.20	chr17	-	2918	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-9	intron_retention	FALSE	canonical	3	130	junction_5	799.754732810667	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514733	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512050_80512868_80513276_80513458_80514603
ES.15782.21	chr17	-	1776	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	744.677446952706	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80507623_80508112_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.22	chr17	-	2962	8	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-9	intron_retention	FALSE	canonical	3	75	junction_5	773.379728258785	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514732	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.23	chr17	-	1786	9	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	781.90520525189	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514733	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80507573_80508064_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.24	chr17	-	2384	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	914.111146141431	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514732	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.25	chr17	-	2652	8	NNC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	0	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	796.010383482681	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514734	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80507573_80508064_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.26	chr17	-	2969	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-9	intron_retention	FALSE	canonical	3	75	junction_5	814.925738447175	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.28	chr17	-	2337	8	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	982.490234671312	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.29	chr17	-	2349	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	979.846671678789	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.3	chr17	-	2747	9	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	75	junction_6	914.476352892736	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCAGTCTTTGGAAG	NA	False	NA	-8	True	AATAAA	-26	NA	80514730	80507505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.30	chr17	-	2194	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	750.743006110939	952	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATAATCCTGATATTC	NA	False	NA	-20	True	AATAAA	-14	NA	80514730	80507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511631_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.31	chr17	-	1808	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	7	473	5	277	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTACATATTAGCATT	NA	False	NA	NA	False	TATAAA	-42	NA	80514727	80507981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.32	chr17	-	1123	8	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	992.207043074444	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514728	80508738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.33	chr17	-	3416	6	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	-105	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514841	80508738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.34	chr17	-	5583	2	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	2057	junction_1	0	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514730	80508738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80512868_80513276
ES.15782.36	chr17	-	1024	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514734	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.37	chr17	-	2483	6	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1059	junction_2	470.04782735377	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514729	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.38	chr17	-	1048	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	-2	-6	0	-1	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514734	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.39	chr17	-	1684	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	130	junction_5	756.932234855449	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512868_80513276_80513458_80514603
ES.15782.4	chr17	-	4537	6	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514732	80507508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.40	chr17	-	1056	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	1	1231	0	-1	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514733	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.41	chr17	-	2430	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1657	junction_4	228.054391660313	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.42	chr17	-	3271	5	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	135	junction_1	912.614239424303	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514733	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.43	chr17	-	1922	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	-1	0	-1	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514734	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.44	chr17	-	1747	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	75	junction_5	814.925738447175	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.45	chr17	-	1931	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	759	junction_3	536.547735268934	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514734	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.46	chr17	-	977	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	782.575679329195	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514732	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513380_80514603
ES.15782.47	chr17	-	1693	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	130	junction_5	799.754732810667	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512050_80512868_80513276_80513458_80514603
ES.15782.49	chr17	-	3387	5	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1956	junction_1	154.627576777236	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514733	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80512868_80513276_80513458_80514603
ES.15782.5	chr17	-	3662	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1657	junction_4	228.054391660313	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGATATTCAGTCTTT	NA	False	NA	-13	True	AATAAA	-21	NA	80514733	80507510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.50	chr17	-	1079	8	NIC	ENSMUSG00000024097.12	novel	2403	8	NA	NA	129	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	743.929418420751	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514157	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80513995
ES.15782.51	chr17	-	3790	5	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1956	junction_1	162.797995995037	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.52	chr17	-	3950	4	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2057	junction_2	135.590887927209	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509634_80510119_80512868_80513276_80513458_80514603
ES.15782.53	chr17	-	4356	4	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2057	junction_2	130.642854973227	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.54	chr17	-	639	6	NNC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	985.6196020778	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511794_80514603
ES.15782.55	chr17	-	4218	6	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	130	junction_4	793.029280670014	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514732	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512050_80512868_80513276
ES.15782.56	chr17	-	2893	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	75	junction_5	934.885150645767	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514733	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.57	chr17	-	972	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	750.743006110939	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511631_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.58	chr17	-	1160	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	914.111146141431	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.59	chr17	-	1846	7	NNC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	12	junction_3	809.175025703477	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514730	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511631_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.6	chr17	-	3150	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	-1229	0	-3	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGATATTCAGTCTT	NA	False	NA	-14	True	AATAAA	-20	NA	80514734	80507511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.60	chr17	-	1742	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	75	junction_5	773.379728258785	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	80514734	80508739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.62	chr17	-	949	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	782.575679329195	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514730	80508740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513355_80514603
ES.15782.63	chr17	-	4435	3	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	2057	junction_1	159	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514730	80508740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80512868_80513276_80513458_80514603
ES.15782.64	chr17	-	1482	9	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_6	980.170488996685	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514733	80508740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.65	chr17	-	1041	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	819.392432954853	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514726	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513282_80513458_80514603
ES.15782.66	chr17	-	1829	7	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_6	843.812117055028	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513355_80514596
ES.15782.67	chr17	-	1305	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	993.074951539409	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512050_80512338_80512690_80512868_80513276_80513458_80514603
ES.15782.7	chr17	-	3158	7	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	759	junction_3	536.547735268934	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTGATATTCAGTCTT	NA	False	NA	-14	True	AATAAA	-20	NA	80514733	80507511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.70	chr17	-	5017	3	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1956	junction_1	50.5	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514733	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80512868_80513276
ES.15782.71	chr17	-	5989	1	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	933	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80508700_80514700
ES.15782.72	chr17	-	1709	7	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	75	junction_4	980.829864055037	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.74	chr17	-	1582	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	75	junction_5	903.443638620177	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.75	chr17	-	2632	8	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_4	1063.92678511335	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514733	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80510119_80511662_80511741_80511817_80512050_80512181_80512403_80512511_80512690_80512868_80513276_80513458_80514603
ES.15782.76	chr17	-	1006	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTTGATTTTTGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	80514730	80508741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.79	chr17	-	954	7	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1001.95399373203	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514734	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512050_80512342_80514603
ES.15782.8	chr17	-	3122	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	1	-1225	0	-5	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCTGATATTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	80514732	80507513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.80	chr17	-	3867	4	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1956	junction_1	178.539133587632	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514730	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80512868_80513276_80513458_80514603
ES.15782.81	chr17	-	4411	4	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	135	junction_1	953.981597772666	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514730	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80511662_80511741_80512868_80513276
ES.15782.82	chr17	-	1879	6	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	135	junction_1	856.009719570987	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514730	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ES.15782.83	chr17	-	2394	6	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	135	junction_1	816.478879089962	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514733	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.84	chr17	-	5093	3	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2057	junction_2	38	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514730	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509634_80510119_80512868_80513276
ES.15782.85	chr17	-	4856	4	NIC	ENSMUSG00000024097.12	novel	1921	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1956	junction_1	119.724684171644	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTTTTGATTTTTGTG	NA	False	NA	-11	True	AATAAA	-12	NA	80514730	80508742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741
ES.15782.87	chr17	-	3671	4	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	135	junction_1	1027.10639933532	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	False	NA	-14	True	AATAAA	-9	NA	80514730	80508745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80510119_80511662_80511741_80513458_80514603
ES.15782.88	chr17	-	2935	5	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	6	-51	intron_retention	FALSE	canonical	3	1657	junction_2	256.394593351732	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTGAAAATGTGGGTT	NA	False	NA	-65	True	AGTAAA	-30	NA	80514726	80508796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80511817_80512690_80512868_80513276_80513458_80514603
ES.15782.9	chr17	-	2247	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAATCCTGATATTCAG	NA	False	NA	-18	True	AATAAA	-16	NA	80514733	80507515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ES.15783.1	chr17	+	1147	1	NIC	ENSMUSG00000046196.5	novel	2438	2	NA	NA	53	-9276	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTC	NA	False	NA	NA	False	AATAAA	-15	NA	80514941	80516088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_80514900_80516100
ES.15784.1	chr17	+	212	1	Intergenic	novelGene_13142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATTAAAGTTGGGGGT	NA	False	NA	NA	False	NA	NA	NA	80516940	80517152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80516900_80517200
ES.15785.1	chr17	-	192	1	Intergenic	novelGene_13143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTCTTCATTTATTT	NA	False	NA	1	True	NA	NA	NA	80521607	80521415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80521400_80521600
ES.15786.1	chr17	+	1139	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	1	-6	1	6	multi-exon	FALSE	canonical	3	317	junction_1	34	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTATTCTTAAAATATT	NA	False	NA	45	True	ATTAAA	-36	NA	80531870	80535932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_80532100_80533049_80533194_80535166
ES.15786.10	chr17	+	4780	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGAACTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	80540175	80553822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540468_80549334
ES.15786.11	chr17	+	2135	5	NNC	ENSMUSG00000117440.2	novel	1964	2	NA	NA	-14355	423	intron_retention	TRUE	non_canonical	0	0	junction_3	1.92028643696715	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATACCATTGTGCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	80540175	80558537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80540468_80549334_80549558_80555091_80555190_80555395_80555414_80557033
ES.15786.12	chr17	+	1546	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTTGTATTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	80540176	80551574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540458_80549334_80549558_80550532
ES.15786.13	chr17	+	4737	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGCCTTGGGCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	80540178	80553792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540458_80549334
ES.15786.14	chr17	+	3786	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGAACTTTTTATTC	NA	False	NA	NA	False	NA	NA	NA	80540184	80553822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540458_80549334_80549558_80550532
ES.15786.15	chr17	+	1286	2	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTATGTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-18	NA	80540188	80550341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540468_80549334
ES.15786.16	chr17	+	3756	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCACGTGGCCTTGGGC	NA	False	NA	NA	False	ATTAAA	-13	NA	80540189	80553787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80540468_80549334_80549558_80550532
ES.15786.17	chr17	+	2106	5	NNC	ENSMUSG00000117440.2	novel	1964	2	NA	NA	-14339	420	intron_retention	FALSE	non_canonical	0	0	junction_3	3.08220700148449	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCACATACCATTGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	80540191	80558534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80540458_80549334_80549558_80555091_80555190_80555395_80555414_80557033
ES.15786.19	chr17	+	4459	2	NNC	ENSMUSG00000117440.2	novel	1964	2	NA	NA	-655	426	intron_retention	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACCATTGTGCTCTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	80553875	80558540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80555190_80555395
ES.15786.2	chr17	+	1070	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	11	-27	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	157.5	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCCGTTTCGGGTTCT	NA	False	NA	12	True	AATAAA	-31	NA	80531880	80535899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80532100_80533049_80533194_80535192
ES.15786.20	chr17	+	873	1	ISM	ENSMUSG00000117440.2	ENSMUST00000234217.2	1964	2	2711	0	2711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATCTTTTTTTATGTT	NA	False	NA	NA	False	NA	NA	NA	80557241	80558114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_80557200_80558100
ES.15786.4	chr17	+	963	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	31	-27	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	185	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCCGTTTCGGGTTCT	NA	False	NA	12	True	AATAAA	-31	NA	80531900	80535899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80531987_80533049_80533194_80535166
ES.15786.5	chr17	+	742	3	FSM	ENSMUSG00000055760.13	ENSMUST00000156869.2	668	3	49	-123	49	123	multi-exon	FALSE	canonical	1	1	junction_2	158	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGACTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	80531918	80534370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_80532100_80533049_80533194_80533953
ES.15786.6	chr17	+	2968	2	ISM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	99	40	99	-40	intron_retention	FALSE	canonical	3	317	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATATTAAAGTAAAAATC	NA	False	NA	-1	True	AATAAA	-18	NA	80531968	80535886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_80532100_80533049
ES.15786.7	chr17	+	189	1	Intergenic	novelGene_13145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGACATTTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	80532796	80532985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80532800_80533000
ES.15786.8	chr17	+	177	2	Intergenic	novelGene_13146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCGTCCCCCTTTAAC	NA	False	NA	NA	False	AATAAA	-16	NA	80532798	80567231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80532953_80567208
ES.15786.9	chr17	+	359	1	ISM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	3409	289	3409	-289	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGTTATAGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	80535278	80535637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_80535300_80535600
ES.15787.1	chr17	+	399	1	Intergenic	novelGene_13147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	80584097	80584496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80584100_80584500
ES.15788.1	chr17	-	157	1	Intergenic	novelGene_13144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAGAAAAAAGAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	80532368	80532211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80532200_80532400
ES.15789.1	chr17	-	4832	23	NIC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	82	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	24.4607967677342	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	960	False	NA	0	True	AATAAA	-20	NA	80597490	80545732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80588624_80588858_80597155
ES.15789.12	chr17	-	3559	21	NIC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	21.6529443725328	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTGGAGTAGACGT	873	False	NA	-6	True	AATAAA	-14	NA	80597577	80545738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80588624_80588858_80597484
ES.15789.13	chr17	-	1798	9	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	14573	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.8901924578702	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTGGAGTAGACGT	4016	False	NA	-6	True	AATAAA	-14	NA	80560698	80545738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560524
ES.15789.14	chr17	-	4448	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	25.6247458376441	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTGGAGTAGACGT	867	False	NA	-6	True	AATAAA	-14	NA	80597583	80545738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583366_80585651_80585811_80588826_80588858_80597484
ES.15789.16	chr17	-	5208	18	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	17501	-1	-2059	-1	3prime_fragment	FALSE	canonical	3	57	junction_17	13.1338596724723	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTGGAGTAGACGT	NA	False	NA	-6	True	AATAAA	-14	NA	80580071	80545738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795
ES.15789.17	chr17	-	5111	14	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.8689565931088	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	916	False	NA	-7	True	AATAAA	-13	NA	80597534	80545739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80559586_80579166_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.18	chr17	-	5113	19	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	15152	0	-4408	0	intron_retention	FALSE	canonical	3	57	junction_17	12.9606479414313	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	NA	False	NA	-7	True	AATAAA	-13	NA	80582420	80545739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360
ES.15789.19	chr17	-	5013	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.1140668730738	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	912	False	NA	-7	True	AATAAA	-13	NA	80597538	80545739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549577_80553098_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585670_80585811_80588624_80588858_80597155
ES.15789.2	chr17	-	4594	23	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-9	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	25.7536004062402	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	869	False	NA	0	True	AATAAA	-20	NA	80597581	80545732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549577_80553098_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80588624_80588858_80597484
ES.15789.21	chr17	-	4898	25	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	24.891396048077	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGTGTGGAGTAGAC	881	False	NA	-8	True	AATAAA	-12	NA	80597569	80545740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588348_80588514_80588624_80588858_80597484
ES.15789.23	chr17	-	4516	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.224636782774	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGTGTGGAGTAGAC	865	False	NA	-8	True	AATAAA	-12	NA	80597585	80545740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588348_80588514_80588826_80588858_80597484
ES.15789.24	chr17	-	3488	22	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.7048712038702	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGTGTGGAGTAGAC	881	False	NA	-8	True	AATAAA	-12	NA	80597569	80545740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563054_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80588348_80588514_80588826_80588858_80597484
ES.15789.25	chr17	-	3122	9	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	16449	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.6096067633425	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGTGTGGAGTAGAC	5892	False	NA	-8	True	AATAAA	-12	NA	80558822	80545740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546709_80548068_80548568_80548613_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660
ES.15789.27	chr17	-	6363	22	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	8795	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	33.4217195528369	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTGGTGTGGAGTAGA	9942	False	NA	-9	True	AATAAA	-11	NA	80588508	80545741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549577_80553098_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572349_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80583032_80583278_80583465_80585670_80585811_80588348
ES.15789.28	chr17	-	4944	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	65	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.4272772010222	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATGTGAGTAAGAAAATAA	943	False	NA	-40	True	AATAAA	-23	NA	80597507	80545772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563054_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597155
ES.15789.29	chr17	-	6512	23	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	0	-33	intron_retention	FALSE	canonical	0	0	junction_14	21.3901672784097	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATGTGAGTAAGAAAATAA	878	False	NA	-40	True	AATAAA	-23	NA	80597572	80545772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572349_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.3	chr17	-	3559	21	NIC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	61	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	25.6643721918149	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	1208	False	NA	0	True	AATAAA	-20	NA	80597242	80545732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80588624_80588858_80597155
ES.15789.30	chr17	-	8314	9	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-8	-48	intron_retention	TRUE	canonical	0	0	junction_6	41.1217703899042	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAGAAAGAAATCATG	870	False	NA	-55	True	AATAAA	-8	NA	80597580	80545787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80559686_80586988_80588514_80588624_80588858_80597484
ES.15789.32	chr17	-	4571	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-18	184	-18	-184	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCATGTATCCTTTCC	860	False	NA	NA	False	AATACA	-9	NA	80597590	80545923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.33	chr17	-	5897	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	34	-1636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	28.6415167882559	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTCCTCACGTTGT	912	False	NA	NA	False	NA	NA	NA	80597538	80547375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582548_80583032_80583278_80583465_80585651_80585811_80588348_80588514_80588624_80588858_80597484
ES.15789.34	chr17	-	3551	16	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.9180543449627	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGGCTTAGTTGTATAG	861	False	NA	NA	False	AATAAA	-15	NA	80597589	80559996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583366_80585651_80585811_80588624_80588858_80597484
ES.15789.35	chr17	-	4380	1	NIC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-4385	-5514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCAGGCACATTGTA	NA	False	NA	NA	False	NA	NA	NA	80582397	80578017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80578000_80582400
ES.15789.36	chr17	-	3962	7	NNC	ENSMUSG00000035051.16	novel	4913	23	NA	NA	-4	-5546	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	26.7830792354676	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAAAG	874	False	NA	NA	False	NA	NA	NA	80597576	80578049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80578244_80578280_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.37	chr17	-	2438	6	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-4	33871	-4	-7107	5prime_fragment	FALSE	canonical	3	55	junction_4	10.4	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTTCAGTTTGTCAT	874	False	NA	NA	False	AATAAA	-18	NA	80597576	80579610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.4	chr17	-	4775	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	-31	-7	-31	5	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTAGACGTGATTTG	847	False	NA	0	True	AATAAA	-20	NA	80597603	80545732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ES.15789.6	chr17	-	5088	24	NIC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	19.0429819272227	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGGAGTAGACGTGAT	860	False	NA	-3	True	AATAAA	-17	NA	80597590	80545735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597155
ES.15789.9	chr17	-	4541	24	NNC	ENSMUSG00000035051.16	novel	4737	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	20.628499015794	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGGAGTAGACGTG	875	False	NA	-5	True	AATAAA	-15	NA	80597575	80545737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588825_80588858_80597484
ES.1579.1	chr1	+	6461	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-83	-51	-80	51	multi-exon	TRUE	canonical	3	102	junction_16	20.6122358303988	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTTTTCCT	NA	False	NA	58	True	TTTAAA	-38	NA	151631041	151697853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.10	chr1	+	6476	20	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-19	277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	42.6044748147214	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAGGTTCATTAGTCC	NA	False	NA	NA	False	AATAAA	-30	NA	151631102	151698079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680508_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.11	chr1	+	6284	20	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.6722538577374	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTAGTTTTAAATTTC	NA	False	NA	5	True	AATAAA	-14	NA	151631104	151697800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681702_151683124_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.12	chr1	+	6645	20	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-17	274	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	34.1918977621333	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAAGTAGGTTCATTAG	NA	False	NA	NA	False	AATAAA	-27	NA	151631104	151698076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646558_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.14	chr1	+	4332	8	ISM	ENSMUSG00000043019.13	ENSMUST00000188145.7	3262	21	-15	30826	-15	-30826	5prime_fragment	FALSE	canonical	3	123	junction_5	18.4578947215282	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAACAACAACAACAACA	NA	False	NA	NA	False	AAAACA	-28	NA	151631106	151663860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489
ES.1579.15	chr1	+	6410	21	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.1734430358502	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTAAATTTCAAATTT	NA	False	NA	11	True	AATAAA	-20	NA	151631108	151697806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151649568_151649689_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.17	chr1	+	6384	21	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.1734430358502	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTAGTTTTAAATTTC	NA	False	NA	5	True	AATAAA	-14	NA	151631108	151697800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151649568_151649669_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.18	chr1	+	6318	20	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.535694640614	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTAAATTTCAAATTT	NA	False	NA	11	True	AATAAA	-20	NA	151631109	151697806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683925_151684121_151687269_151687456_151694060
ES.1579.2	chr1	+	6672	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-61	-284	-58	284	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCATTAGTCCTTTTCTA	NA	False	NA	NA	False	AATAAA	-37	NA	151631063	151698086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.21	chr1	+	4824	8	ISM	ENSMUSG00000043019.13	ENSMUST00000188145.7	3262	21	-12	30331	-12	-30331	5prime_fragment	FALSE	canonical	3	123	junction_5	18.4578947215282	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGACTTGGTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	151631109	151664355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489
ES.1579.23	chr1	+	6329	20	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	34.6696319493211	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTAGTTTTAAATTTC	NA	False	NA	5	True	AATAAA	-14	NA	151631117	151697800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671905_151672540_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.24	chr1	+	1118	8	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-2	-35103	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.7366974521251	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATAGTTTTACTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	151631119	151659583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151659413
ES.1579.25	chr1	+	6307	19	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-2	21	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	33.3192562868107	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAATCATTGTACAA	NA	False	NA	28	True	AATAAA	-37	NA	151631119	151697823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151631479_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.26	chr1	+	4462	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	-1	1866	-1	1206	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGAATCTTAGAGA	NA	False	NA	NA	False	AATAAA	-39	NA	151631123	151695936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.27	chr1	+	6045	19	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	46.1754571120435	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGTTTTAAATTTCAAAT	NA	False	NA	9	True	AATAAA	-18	NA	151631123	151697804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653258_151660553_151660596_151668078_151668148_151670430_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.28	chr1	+	6223	21	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.2022726539069	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTAGTTTTAAATTTCA	NA	False	NA	6	True	AATAAA	-15	NA	151631126	151697801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631231_151631331_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.29	chr1	+	6176	19	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	37.0467255846345	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTAAATTTCAAATTT	NA	False	NA	11	True	AATAAA	-20	NA	151631127	151697806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151681597_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.3	chr1	+	6494	21	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-26	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.5523287831287	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTAGAATCATTGTA	NA	False	NA	25	True	AATAAA	-34	NA	151631095	151697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151649568_151649689_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.31	chr1	+	6341	20	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	4	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	43.9424201437363	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCTAGTTTTAAATT	NA	False	NA	3	True	AATAAA	-12	NA	151631128	151697798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646558_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681602_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.32	chr1	+	6098	21	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.2255015210612	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTAGTTTTAAATTTCA	NA	False	NA	6	True	AATAAA	-15	NA	151631132	151697801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631231_151631331_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680090_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.33	chr1	+	5545	12	ISM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	36952	-265	36866	265	3prime_fragment	FALSE	canonical	3	102	junction_8	18.3640864031263	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATCATCAAAAGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	151668076	151698067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.34	chr1	+	4643	7	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	48922	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.9555357848913	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTAGAATCATTGTA	2128	False	NA	25	True	AATAAA	-34	NA	151680132	151697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151680195_151680390_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.4	chr1	+	6205	21	NNC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	35.2022726539069	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTAGTTTTAAATTTCA	NA	False	NA	6	True	AATAAA	-15	NA	151631099	151697801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060_151696712_151696857
ES.1579.5	chr1	+	6576	20	NIC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-22	281	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	31.4765884947638	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTCATTAGTCCTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	151631099	151698083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.7	chr1	+	5760	7	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	-21	-30840	intron_retention	FALSE	canonical	3	128	junction_3	17.6886655485621	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	NA	False	NA	NA	False	AAAACA	-14	NA	151631100	151663846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151653311_151658123_151658259_151660489
ES.1579.8	chr1	+	6208	20	NNC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-20	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.5269736799274	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTAGAATCATTGTA	NA	False	NA	25	True	AATAAA	-34	NA	151631101	151697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660586_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680508_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.1579.9	chr1	+	6314	20	NIC	ENSMUSG00000043019.13	novel	3127	21	NA	NA	-20	21	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	31.4765884947638	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAATCATTGTACAA	NA	False	NA	28	True	AATAAA	-37	NA	151631101	151697823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ES.15790.1	chr17	+	645	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	1	-2	1	-1	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTTGAATTATGTATT	NA	False	NA	14	True	AATAAA	-17	NA	80597641	80604904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ES.15790.2	chr17	+	444	4	ISM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	19	1785	19	-1785	5prime_fragment	FALSE	canonical	3	50	junction_3	11.5181016954473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTCAGTCATGCTTGT	NA	False	NA	NA	False	AATGAA	-45	NA	80597659	80603117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941
ES.15791.1	chr17	-	158	1	Intergenic	novelGene_13148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAATAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80608646	80608488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80608500_80608600
ES.15792.1	chr17	+	3268	8	NNC	ENSMUSG00000054901.8	novel	611	3	NA	NA	5544	1167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.0303814862217	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACATACCTCTAATCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	80666951	80682743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_80667152_80667750_80667881_80672697_80672831_80674681_80674766_80675613_80675698_80677699_80677849_80678699_80678865_80680420
ES.15793.1	chr17	-	292	1	Intergenic	novelGene_13149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGGAAGAATGTGAATT	NA	False	NA	NA	False	NA	NA	NA	80687044	80686752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80686800_80687000
ES.15793.2	chr17	-	157	1	Intergenic	novelGene_13150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	80687042	80686885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80686900_80687000
ES.15794.1	chr17	+	175	1	Intergenic	novelGene_13151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAACATGCAG	NA	False	NA	NA	False	NA	NA	NA	80707568	80707743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80707600_80707700
ES.15795.1	chr17	+	1447	1	Intergenic	novelGene_13152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTGCAGAACACTTA	NA	False	NA	NA	False	NA	NA	NA	80746802	80748249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80746800_80748200
ES.15796.1	chr17	+	5183	1	Antisense	novelGene_ENSMUSG00000024241.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAAAATTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	80752915	80758098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80752900_80758100
ES.15797.1	chr17	+	7731	2	Antisense	novelGene_ENSMUSG00000024241.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAACATGTTCCAAATCA	NA	False	NA	NA	False	NA	NA	NA	80774873	80782693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80775934_80776022
ES.15798.1	chr17	+	1809	1	Antisense	novelGene_ENSMUSG00000024241.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAATGTTTGAAACCAC	NA	False	NA	NA	False	AATAAA	-15	NA	80786955	80788764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80787000_80788800
ES.15799.1	chr17	-	8903	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-462	-5	22	5	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCAGTCCATTTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	80787860	80701174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.10	chr17	-	6259	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-482	2659	2	-2659	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCTCAAGTTAATTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	80787880	80703838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.11	chr17	-	6228	22	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	22	-2664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.2563150924568	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGTCCTCAAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	80787860	80703843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767356_80767477_80787265
ES.15799.12	chr17	-	5608	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-519	3347	-35	-3347	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGATTCTTATTTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	80787917	80704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.13	chr17	-	5323	21	NIC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	27	-3347	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	28.2543801913969	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGATTCTTATTTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	80787855	80704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.15	chr17	-	5364	21	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	-58	-3347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.6489767933567	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGATTCTTATTTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	80787456	80704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716610_80721027_80721146_80722371_80722535_80726437_80726558_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.16	chr17	-	6613	16	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	31823	3347	31823	-3347	3prime_fragment	FALSE	canonical	3	87	junction_5	15.6546052861983	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGATTCTTATTTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	80755575	80704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030
ES.15799.17	chr17	-	6722	22	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	-1	-3353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.1324288842934	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGGTTGATTCTTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	80787883	80704532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80739771_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.18	chr17	-	4276	11	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	56770	-3353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	40.1377627677478	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGGTTGATTCTTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	80730628	80704532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80715047_80715115_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544
ES.15799.19	chr17	-	4878	12	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	54056	3356	54056	-3356	3prime_fragment	FALSE	canonical	3	87	junction_5	15.5175187588014	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAATGGTTGATTCT	NA	False	NA	NA	False	AATAAA	-43	NA	80733342	80704535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558
ES.15799.2	chr17	-	8668	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-498	266	-14	-266	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTGTGTTATTTTGCAA	NA	False	NA	0	True	AATAAA	-22	NA	80787896	80701445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.20	chr17	-	5504	22	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	36	-3373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	29.1522704996274	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAATTATTATATGG	NA	False	NA	NA	False	AATAAA	-26	NA	80787846	80704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761343_80762480_80762613_80767350_80767477_80787265
ES.15799.21	chr17	-	5468	23	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	-14	-3373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.5846575041245	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAATTATTATATGG	NA	False	NA	NA	False	AATAAA	-26	NA	80787896	80704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741197_80741289_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.22	chr17	-	5569	23	NNC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	25	-3386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.4958109222967	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTGGCATATATTA	NA	False	NA	NA	False	AATAAA	-13	NA	80787857	80704565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80753605_80753666_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.23	chr17	-	4851	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-471	4056	13	-4056	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTCCTCCTTTGTTTTC	NA	False	NA	NA	False	TTTAAA	-14	NA	80787869	80705235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.24	chr17	-	7559	20	FSM	ENSMUSG00000024241.8	ENSMUST00000234841.2	5553	20	27	-2033	27	2033	multi-exon	FALSE	canonical	3	87	junction_3	15.5887238172118	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACATATTTTCAAAGG	NA	False	NA	NA	False	AATAAA	-6	NA	80787855	80710412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.25	chr17	-	5511	20	FSM	ENSMUSG00000024241.8	ENSMUST00000234841.2	5553	20	43	-1	43	1	multi-exon	FALSE	canonical	3	87	junction_3	15.5887238172118	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAAACTATCAGTTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	80787839	80712444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.27	chr17	-	2706	14	ISM	ENSMUSG00000024241.8	ENSMUST00000234841.2	5553	20	36	15424	36	-15424	5prime_fragment	FALSE	canonical	3	92	junction_10	13.5977721809134	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAAAAATTGCAAGA	NA	False	NA	NA	False	AATGAA	-33	NA	80787846	80727869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.29	chr17	-	4123	10	NNC	ENSMUSG00000024241.8	novel	5553	20	NA	NA	-4	-26746	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	34.4279530413483	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTGCTACATTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	80787886	80739191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80741582_80742323_80742449_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.3	chr17	-	8411	21	NIC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	19	-267	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	28.2543801913969	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTGTGTTATTTTGCA	NA	False	NA	-1	True	AATAAA	-21	NA	80787863	80701446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ES.15799.30	chr17	-	3683	6	NNC	ENSMUSG00000024241.8	novel	5553	20	NA	NA	29816	-26747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.8265084971551	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCTTGCTACATTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	80757582	80739192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80753605_80753666_80756686
ES.15799.4	chr17	-	8751	16	ISM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	32764	268	32764	-268	3prime_fragment	FALSE	canonical	3	87	junction_5	15.6546052861983	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAAGTGTGTTATTTTGC	NA	False	NA	-2	True	AATAAA	-20	NA	80754634	80701447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030
ES.158.1	chr1	+	424	3	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAGAT	NA	False	NA	NA	False	NA	NA	NA	17321207	17465174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_17321275_17321387_17321446_17464875
ES.158.2	chr1	+	1045	2	Genic_Genomic	ENSMUSG00000100398.2	novel	472	1	NA	NA	-143772	231	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACATATAGTAAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	17321409	17465884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_17321446_17464875
ES.158.3	chr1	+	189	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATTATATTATTG	NA	False	NA	NA	False	NA	NA	NA	17460731	17460920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_17460700_17460900
ES.1580.1	chr1	-	1141	1	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAGGAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	151691221	151690080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151690100_151691200
ES.15800.1	chr17	-	1043	1	Intergenic	novelGene_13153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATAAAATGTTGATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	80790813	80789770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80789800_80790800
ES.15801.1	chr17	+	225	1	Intergenic	novelGene_13154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTTCTTTGTTTCCT	NA	False	NA	NA	False	AAGAAA	-14	NA	80797186	80797411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80797200_80797400
ES.15802.1	chr17	+	3239	3	Intergenic	novelGene_13155	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGGGAAATTCTGTTT	NA	False	NA	NA	False	AATAAA	-39	NA	80806534	80817239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80806934_80811494_80813614_80816518
ES.15802.2	chr17	+	174	1	Intergenic	novelGene_13156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	2984	False	NA	NA	False	NA	NA	NA	80812297	80812471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80812300_80812500
ES.15803.1	chr17	-	174	1	Intergenic	novelGene_13157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	80818719	80818545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80818500_80818700
ES.15804.1	chr17	+	166	2	Intergenic	novelGene_13158	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATCTTTAGCTCTTA	9977	False	NA	NA	False	NA	NA	NA	80819290	80819551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80819338_80819432
ES.15805.1	chr17	+	2010	1	Genic_Genomic	ENSMUSG00000117375.2	novel	NA	NA	NA	NA	-14	-8483	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAAAACCCGATGA	NA	False	NA	NA	False	TTTAAA	-38	NA	80860878	80862888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_80860900_80862900
ES.15806.1	chr17	-	2627	8	NNC	ENSMUSG00000033966.9	novel	2931	10	NA	NA	9985	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.39045721866879	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTATTCAAATCAATG	NA	False	NA	NA	False	AATAAA	-24	NA	80861278	80830980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80832816_80841226_80841362_80842822_80842880_80846932_80847016_80851048_80851247_80855120_80855212_80858254_80858328_80861123
ES.15806.2	chr17	-	2867	7	NNC	ENSMUSG00000033966.9	novel	2931	10	NA	NA	13475	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	2.23606797749979	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTCTGTCTCCTAAC	NA	False	NA	NA	False	AATAAA	-7	NA	80857788	80830997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80832816_80841226_80841362_80842822_80842880_80846932_80847016_80851048_80851247_80855120_80855212_80857303
ES.15806.3	chr17	-	179	1	Intergenic	novelGene_13159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGCTGCAA	NA	False	NA	NA	False	NA	NA	NA	80859572	80859393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80859400_80859600
ES.15807.1	chr17	+	4082	1	Intergenic	novelGene_13160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGTGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	80871457	80875539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80871500_80875500
ES.15808.1	chr17	+	211	1	Intergenic	novelGene_13161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCAAAATATACAGACT	NA	False	NA	NA	False	TTTAAA	-16	NA	80920274	80920485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_80920300_80920500
ES.15809.1	chr17	+	2547	9	Antisense	novelGene_ENSMUSG00000024242.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCAAGATTTATCACACA	NA	False	NA	NA	False	AATAAA	-11	NA	80936014	80961366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_80937903_80944148_80944228_80951560_80951672_80951755_80951836_80951918_80951983_80952141_80952274_80956954_80957033_80958517_80958556_80961289
ES.1581.1	chr1	-	1445	2	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTGGTCATTTATTC	NA	False	NA	NA	False	NA	NA	NA	151722312	151720249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151721539_151722156
ES.15810.1	chr17	+	6032	1	Intergenic	novelGene_13164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAAACATTCCTTCAA	NA	False	NA	NA	False	ACTAAA	-16	NA	81016757	81022789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_81016800_81022800
ES.15811.10	chr17	-	4255	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-149	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	55.8979298721861	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035671	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.12	chr17	-	4076	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-13226	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	59.3220734502554	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	80971805	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80971594
ES.15811.15	chr17	-	4147	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	79.0392187264387	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035586	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80969602_80969768_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.16	chr17	-	4151	36	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-80	-2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	76.865129696536	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035602	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.17	chr17	-	5173	12	NNC	ENSMUSG00000024242.16	novel	3769	19	NA	NA	16071	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	113.000694797835	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	80916344	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80915509_80915545
ES.15811.18	chr17	-	12476	31	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-71	-2	intron_retention	FALSE	canonical	3	139	junction_16	39.3835837204623	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035593	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80892221_80900350_80900444_80900519_80905154_80909621_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.19	chr17	-	4190	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.8351307057397	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035571	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890028_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.2	chr17	-	4300	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	-203	-9	-134	4	multi-exon	TRUE	canonical	3	111	junction_19	35.3232837516559	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTGCTGGTCAGTCGGC	NA	False	NA	5	True	AATAAA	-24	NA	81035656	80887936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.20	chr17	-	4227	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-149	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_30	71.2946429868783	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035671	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
ES.15811.21	chr17	-	3994	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-76	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_33	52.9802361056886	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035598	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.24	chr17	-	3965	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-62	-2	at_least_one_novel_splicesite	TRUE	canonical	2	18	junction_16	78.0508534280363	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035584	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.25	chr17	-	4141	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-160	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_34	53.8948819879798	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035682	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.26	chr17	-	6148	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-103	-2	intron_retention	FALSE	canonical	2	12	junction_5	79.1226338323808	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035625	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.27	chr17	-	4287	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-88	-2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_15	55.6866149242918	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035610	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.30	chr17	-	4227	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-72	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	56.7669216924566	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035594	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961341_80961847_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.31	chr17	-	7922	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	57.6260761152232	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035590	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80915509_80915545_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.32	chr17	-	4724	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-157	-2	intron_retention	FALSE	canonical	3	4	junction_32	56.2108804942379	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035679	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035374
ES.15811.33	chr17	-	3966	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-73	2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_15	66.4367799492687	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGCGTAGTTGCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	81035595	80887943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.34	chr17	-	3964	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-75	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_31	68.025436824003	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGCGTAGTTGCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	81035597	80887943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222_81035280_81035521
ES.15811.35	chr17	-	2758	16	NIC	ENSMUSG00000024242.16	novel	3769	19	NA	NA	6639	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	68.4396246499221	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	8050	False	NA	-3	True	AATAAA	-16	NA	80925776	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80921343_80921457_80922445_80922606_80923914_80923958_80925722
ES.15811.36	chr17	-	4147	32	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-67	1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_16	69.6423298741632	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035589	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.37	chr17	-	6050	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-65	1	intron_retention	FALSE	non_canonical	0	0	junction_28	58.2548281260875	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035587	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961841_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.40	chr17	-	4296	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-60	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	54.9798861292735	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035582	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936793_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.42	chr17	-	4695	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	28	1	intron_retention	FALSE	canonical	3	139	junction_19	37.0784114243046	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035494	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.43	chr17	-	4022	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_33	56.4179601358939	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTAGTTGCTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	81035481	80887944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035374
ES.15811.44	chr17	-	5968	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-30	0	intron_retention	FALSE	canonical	3	12	junction_5	56.6905151566256	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035484	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.45	chr17	-	4202	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_31	57.3580363675178	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035595	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
ES.15811.46	chr17	-	3914	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_30	68.0274530979957	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035612	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222_81035280_81035521
ES.15811.49	chr17	-	4193	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	79.0216694484762	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035492	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.5	chr17	-	4221	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-151	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_30	56.6641161614103	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTAGTTGCTGGTCAG	NA	False	NA	0	True	AATAAA	-19	NA	81035673	80887941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
ES.15811.50	chr17	-	4272	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-139	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_15	54.8518512535129	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035661	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.51	chr17	-	4262	36	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	81.2834094576576	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035442	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81000296_81000514_81035222_81035280_81035374
ES.15811.53	chr17	-	3998	31	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	58.3739001799796	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035484	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.54	chr17	-	4443	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-49	0	intron_retention	FALSE	canonical	2	12	junction_5	69.6727494148127	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035571	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.55	chr17	-	4133	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	59.3220734502554	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035493	80887945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_81035222
ES.15811.56	chr17	-	4217	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	72.6820384341104	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCGTAGTTGCTG	NA	False	NA	-5	True	AATAAA	-14	NA	81035565	80887946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952144_80952275_80956955_80957029_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.58	chr17	-	4030	32	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	59.1486601356081	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCGTAGTTGCTG	NA	False	NA	-5	True	AATAAA	-14	NA	81035454	80887946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.59	chr17	-	4048	33	NNC	ENSMUSG00000024242.16	novel	4088	33	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	71.9943574177866	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCGTAGTTGCTG	NA	False	NA	-5	True	AATAAA	-14	NA	81035433	80887946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952144_80952275_80956955_80957029_80958530_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.6	chr17	-	4428	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	71.8038855480536	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTAGTTGCTGGTCAG	NA	False	NA	0	True	AATAAA	-19	NA	81035558	80887941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80962804_80963036_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.60	chr17	-	4963	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-67	-1	intron_retention	FALSE	canonical	0	0	junction_22	71.608413765051	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCGTAGTTGCTG	NA	False	NA	-5	True	AATAAA	-14	NA	81035589	80887946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80943879_80944055_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.61	chr17	-	4354	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-88	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	79.7027349063826	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTGCGTAGTTGCT	NA	False	NA	-6	True	AATAAA	-13	NA	81035610	80887947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80962682_80963036_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.63	chr17	-	4061	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-139	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	67.8750269520872	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTGCGTAGTTGCT	NA	False	NA	-6	True	AATAAA	-13	NA	81035661	80887947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.65	chr17	-	5279	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.8351307057397	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGTTGCGTAGTTGC	NA	False	NA	-7	True	AATAAA	-12	NA	81035571	80887948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80891123_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.66	chr17	-	3533	25	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	6331	-3	intron_retention	FALSE	canonical	3	139	junction_18	40.2070811549409	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGTTGCGTAGTTGC	NA	False	NA	-7	True	AATAAA	-12	NA	80952248	80887948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142
ES.15811.67	chr17	-	4202	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-80	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_34	57.1462111287072	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGTTGCGTAGTTGC	NA	False	NA	-7	True	AATAAA	-12	NA	81035602	80887948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035374
ES.15811.68	chr17	-	4028	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	58.6844327149895	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGTTGCGTAGTTGC	NA	False	NA	-7	True	AATAAA	-12	NA	81035454	80887948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_81035222
ES.15811.69	chr17	-	4545	18	NIC	ENSMUSG00000024242.16	novel	3769	19	NA	NA	-834	-4	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	61.5068004792178	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	5524	False	NA	-8	True	AATAAA	-11	NA	80933249	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484
ES.15811.7	chr17	-	6258	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	-2	intron_retention	FALSE	canonical	3	139	junction_18	38.4105978010952	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035454	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.70	chr17	-	4302	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	71.7227341704	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035496	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80943879_80944055_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.73	chr17	-	4451	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-160	-4	intron_retention	FALSE	canonical	3	139	junction_18	38.2470255175157	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035682	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.74	chr17	-	4484	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	82.7252299351296	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035437	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921451_80922439_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80962682_80963036_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.79	chr17	-	3929	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-72	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	67.7528179187958	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035594	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.80	chr17	-	3140	22	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-10811	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	67.357542627035	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	80943226	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80943101
ES.15811.81	chr17	-	4085	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-84	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	77.2806696601044	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035606	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.82	chr17	-	4240	33	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-99	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	57.8329946781031	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035621	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923926_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.83	chr17	-	5016	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	31	-4	intron_retention	FALSE	canonical	0	0	junction_31	82.2812150317886	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035491	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81000296_81000514_81002584_81002760_81035222
ES.15811.84	chr17	-	3993	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-86	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	69.8196811707693	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035608	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.85	chr17	-	4484	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-162	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.633655657361	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035684	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80910823_80910930_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.87	chr17	-	4563	31	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	31	-4	intron_retention	FALSE	canonical	0	0	junction_29	74.1278849916368	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	False	NA	-8	True	AATAAA	-11	NA	81035491	80887949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961897_80963285_80963351_80971420_80971509_80988296_80988355_81035222
ES.15811.88	chr17	-	6077	31	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-19	-5	intron_retention	FALSE	canonical	3	111	junction_17	35.4538980774877	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGCTGTTGCGTAGTT	NA	False	NA	-9	True	AATAAA	-10	NA	81035473	80887950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ES.15811.89	chr17	-	4148	36	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-90	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	86.5370228661156	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGCTGTTGCGTAGTT	NA	False	NA	-9	True	AATAAA	-10	NA	81035612	80887950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951829_80951916_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.9	chr17	-	4049	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-69	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_29	67.7355431529738	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGTAGTTGCTGGTCA	NA	False	NA	-1	True	AATAAA	-18	NA	81035591	80887942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961841_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222_81035280_81035521
ES.15811.90	chr17	-	3521	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-68	-676	combination_of_known_splicesites	FALSE	canonical	3	12	junction_31	57.3580363675178	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGTTTTCTATGTG	NA	False	NA	NA	False	AATACA	-19	NA	81035590	80888621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
ES.15811.91	chr17	-	218	1	Intergenic	novelGene_13162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTTTTTTTTAAGCC	NA	False	NA	NA	False	NA	NA	NA	80944463	80944245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80944200_80944500
ES.15811.92	chr17	-	2716	1	Intergenic	novelGene_13163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTATTAGCCTTATGT	NA	False	NA	NA	False	NA	NA	NA	81000452	80997736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_80997700_81000500
ES.15812.1	chr17	-	2648	1	Intergenic	novelGene_13165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	81044037	81041389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_81041400_81044000
ES.15813.1	chr17	-	94	1	Intergenic	novelGene_13166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGACTAAGAGAAG	NA	False	NA	-9	True	AATAAA	-18	NA	81245441	81245347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_81245300_81245400
ES.15814.1	chr17	+	1839	4	FSM	ENSMUSG00000024245.5	ENSMUST00000025092.5	1696	4	-149	6	-149	-6	multi-exon	FALSE	canonical	2	2	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGCTGTGCCTTTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	81251911	81309239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_81252518_81293608_81293723_81297133_81297272_81308258
ES.15815.1	chr17	-	3926	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-8	-2085	7	2085	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCTCAGTTGCCTTA	8156	False	NA	NA	False	NA	NA	NA	81372504	81331675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.10	chr17	-	2006	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.3906873813273	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGCTTATAGACTCT	8153	False	NA	NA	False	ATTAAA	-23	NA	81372507	81333759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81336591_81336753_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.11	chr17	-	3259	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_2	58.9894905894262	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGCTTATAGACTCT	8165	False	NA	NA	False	ATTAAA	-23	NA	81372495	81333759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81336591_81336753_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81361963_81363203_81363340_81372363
ES.15815.12	chr17	-	3808	12	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.1272167741277	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGCTTATAGACTC	8165	False	NA	NA	False	ATTAAA	-22	NA	81372495	81333760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81336591_81338444_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81371345_81371470_81372363
ES.15815.2	chr17	-	1960	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-8	2083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9101529166874	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGACTCTCAGTTGCCT	8141	False	NA	NA	False	NA	NA	NA	81372519	81331677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81332137_81334115_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.3	chr17	-	3949	1	Genic_Genomic	ENSMUSG00000024246.10	novel	NA	NA	NA	NA	36862	2075	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATACTAATTTGACTCTC	NA	False	NA	NA	False	NA	NA	NA	81335634	81331685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_81331700_81335600
ES.15815.4	chr17	-	1863	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	-27	-3	-12	3	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATAGACTCTTG	8137	False	NA	NA	False	ATTAAA	-25	NA	81372523	81333757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.5	chr17	-	1953	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-8181	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	55.9293304090081	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATAGACTCTTG	7641	False	NA	NA	False	ATTAAA	-25	NA	81380692	81333757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345521_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81380568
ES.15815.6	chr17	-	1853	10	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	38.2954724461854	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATAGACTCTTG	8159	False	NA	NA	False	ATTAAA	-25	NA	81372501	81333757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345521_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.7	chr17	-	3732	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	-17	3	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	55.1071683177425	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATAGACTCTTG	8132	False	NA	NA	False	ATTAAA	-25	NA	81372528	81333757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81336591_81338444_81340060_81340170_81344926_81345042_81345521_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15815.8	chr17	-	1945	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.4774669479293	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGCTTATAGACTCT	8167	False	NA	NA	False	ATTAAA	-23	NA	81372493	81333759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ES.15816.1	chr17	-	204	1	Intergenic	novelGene_13167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATAGATACCACTTAC	5393	False	NA	NA	False	NA	NA	NA	81556563	81556359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_81556400_81556600
ES.15817.1	chr17	-	2638	1	ISM	ENSMUSG00000054640.16	ENSMUST00000234131.2	18464	8	261255	12611	261254	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAGTGGCACAGCATG	9104	False	NA	NA	False	AATAAA	-23	NA	81695782	81693144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_81693100_81695800
ES.15818.1	chr17	+	179	1	Intergenic	novelGene_13168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	82023648	82023827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_82023600_82023800
ES.15819.1	chr17	+	2673	3	Intergenic	novelGene_13169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTCTCACCCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	82422119	82448166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_82422265_82441348_82441520_82445809
ES.15819.2	chr17	+	1793	2	Intergenic	novelGene_13170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTGTCTCACCC	NA	False	NA	NA	False	AATAAA	-15	NA	82446078	82448162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_82446310_82446600
ES.1582.1	chr1	+	9698	1	Antisense	novelGene_ENSMUSG00000032666.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTTTTAAAGACAATAGG	NA	False	NA	NA	False	NA	NA	NA	151787055	151796753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_151787100_151796800
ES.15820.1	chr17	+	516	1	Intergenic	novelGene_13171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTCACTCCCAAACTC	NA	False	NA	NA	False	AATAAA	-24	NA	82571205	82571721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_82571200_82571700
ES.15821.1	chr17	+	616	1	Intergenic	novelGene_13174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCTCTATATATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	82603375	82603991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_82603400_82604000
ES.15822.1	chr17	-	3428	3	Intergenic	novelGene_13172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGTGTATTTGTTGC	NA	False	NA	NA	False	AATACA	-18	NA	82617249	82597592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_82600728_82607155_82607306_82617106
ES.15822.2	chr17	-	2161	3	Intergenic	novelGene_13173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGCTTCCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	82617204	82598814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_82600728_82607155_82607306_82617106
ES.15823.1	chr17	-	1029	1	FSM	ENSMUSG00000117438.2	ENSMUST00000234808.2	885	1	-77	-67	-77	67	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	82718325	82717296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_82717300_82718300
ES.15824.1	chr17	-	178	2	Intergenic	novelGene_13175	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	82843447	82824241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_82824389_82843416
ES.15824.2	chr17	-	252	1	Intergenic	novelGene_13176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTAATTTACTTGTAAT	NA	False	NA	NA	False	AAAAAG	-10	NA	82843448	82843196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_82843200_82843400
ES.15825.1	chr17	-	406	3	Intergenic	novelGene_13177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAAAAATTGG	NA	False	NA	NA	False	NA	NA	NA	83256406	83248391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83248573_83249856_83249968_83256292
ES.15826.1	chr17	-	205	1	Intergenic	novelGene_13178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAAGAACTGA	NA	False	NA	NA	False	NA	NA	NA	83323044	83322839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83322800_83323000
ES.15827.1	chr17	+	156	1	Intergenic	novelGene_13179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	83341992	83342148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83342000_83342100
ES.15828.1	chr17	+	2468	7	FSM	ENSMUSG00000024247.15	ENSMUST00000170794.8	2446	7	-33	11	-33	-11	multi-exon	FALSE	canonical	0	0	junction_6	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATGCTCCCCTCCGT	NA	False	NA	NA	False	AATAAA	-12	NA	83522687	83532488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211_83531386_83531620
ES.15829.1	chr17	-	210	1	Intergenic	novelGene_13180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGCTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	83594775	83594565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83594600_83594800
ES.1583.1	chr1	-	9741	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-182	0	-182	0	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCTCTGTTCTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	151966058	151760274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ES.1583.2	chr1	-	3422	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-188	6325	-188	2054	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTGTACTTTATT	NA	False	NA	-2	True	CATAAA	-12	NA	151966064	151766599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ES.1583.3	chr1	-	2240	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-190	7509	-190	870	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTATTTTTTTAA	NA	False	NA	NA	False	AGTAAA	-23	NA	151966066	151767783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ES.1583.4	chr1	-	1698	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-201	8062	-201	317	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTCTTCTCCCATTC	NA	False	NA	0	True	AATAAA	-20	NA	151966077	151768336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ES.1583.5	chr1	-	1370	6	NNC	ENSMUSG00000032666.17	novel	9559	6	NA	NA	-15278	317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.4351894665747	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTCTTCTCCCATTC	1001	False	NA	0	True	AATAAA	-20	NA	151946321	151768336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151946254
ES.1583.6	chr1	-	1003	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-157	8713	-157	0	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCAGAGGAATATTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	151966033	151768987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ES.1583.7	chr1	-	179	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATATCAAATAT	NA	False	NA	NA	False	NA	NA	NA	151956767	151956588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_151956600_151956800
ES.15830.1	chr17	+	160	1	Intergenic	novelGene_13181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGTAGACTTTGAA	NA	False	NA	6	True	NA	NA	NA	83605387	83605547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83605400_83605500
ES.15831.1	chr17	-	169	1	Intergenic	novelGene_13182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAAAAACATTTA	7090	False	NA	NA	False	NA	NA	NA	83624823	83624654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83624700_83624800
ES.15832.1	chr17	+	288	1	Intergenic	novelGene_13183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCCATTACAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	83629260	83629548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83629300_83629500
ES.15833.1	chr17	+	5525	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-74	-10	-74	6	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTTGTTTGGTCTT	NA	False	NA	22	True	GATAAA	-25	NA	83658285	83787796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.10	chr17	+	6053	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-36	-15	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	120.687491893041	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658323	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83733454_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.101	chr17	+	6145	18	NNC	ENSMUSG00000032624.17	novel	3814	7	NA	NA	-24063	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	100.324732260366	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83739666	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.102	chr17	+	5208	17	ISM	ENSMUSG00000032624.17	ENSMUST00000234460.2	5286	24	88294	-3	-17014	3	3prime_fragment	FALSE	canonical	3	349	junction_8	41.0348556108097	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTTTGTTTGGT	NA	False	NA	19	True	GATAAA	-22	NA	83746715	83787793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.103	chr17	+	4187	17	NNC	ENSMUSG00000032624.17	novel	5052	21	NA	NA	-14991	-15	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_16	101.307699608667	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83748738	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134_83785821_83785935
ES.15833.104	chr17	+	6442	15	ISM	ENSMUSG00000032624.17	ENSMUST00000234460.2	5286	24	91360	21	-13948	-15	3prime_fragment	FALSE	canonical	3	349	junction_6	35.6422845645392	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83749781	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.106	chr17	+	3337	8	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	147.846445437729	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83763691	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784769_83785142
ES.15833.107	chr17	+	5519	1	Intergenic	novelGene_13186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGACAATTTGTAGCCC	NA	False	NA	NA	False	NA	NA	NA	83772794	83778313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83772800_83778300
ES.15833.12	chr17	+	4909	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-32	564	-32	-471	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGGTCTCTTTCAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	83658327	83787222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.13	chr17	+	5174	22	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	112.735940543597	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658327	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.14	chr17	+	5142	21	FSM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	-83	-7	-32	1	multi-exon	FALSE	canonical	3	67	junction_3	95.8126296476618	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTTTGCCTTTGTTTG	NA	False	NA	17	True	GATAAA	-20	NA	83658327	83787791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.15	chr17	+	4837	18	NIC	ENSMUSG00000032624.17	novel	5052	21	NA	NA	-30	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	103.104878240338	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTCCTTTGCCTTTGT	NA	False	NA	14	True	GATAAA	-17	NA	83658329	83787788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.16	chr17	+	5583	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-29	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	141.438713661509	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAAAAAAATAAGATAAT	NA	False	NA	-9	True	NA	NA	NA	83658330	83787765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83769700_83769835_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.17	chr17	+	5468	23	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	117.948344555874	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTGCCTTTG	NA	False	NA	13	True	GATAAA	-16	NA	83658331	83787787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.18	chr17	+	5291	23	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-26	4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	144.162679286886	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCCTTTGTTTGGTC	NA	False	NA	20	True	GATAAA	-23	NA	83658333	83787794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.19	chr17	+	4872	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-310	-1628	-26	-469	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGTCTCTTTCAAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	83658333	83787224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.2	chr17	+	5338	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-65	2	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTGCCTTTGTTTGG	NA	False	NA	18	True	GATAAA	-21	NA	83658294	83787792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.20	chr17	+	4360	22	NIC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-26	-852	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	107.575402021937	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTTTTCCTACTTTT	NA	False	NA	NA	False	NA	NA	NA	83658333	83786841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.21	chr17	+	5529	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	129.558885167702	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658333	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83733956_83734048_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.22	chr17	+	5299	22	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.168709748977	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658333	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.24	chr17	+	5178	21	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	112.765453486429	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658334	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729175_83735617_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.25	chr17	+	4727	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-24	-471	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGGTCTCTTTCAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	83658335	83787222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.26	chr17	+	5522	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-22	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	135.972117239773	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658337	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83746162_83746239_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.27	chr17	+	5200	23	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	130.836256569262	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658337	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758473_83761891_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.28	chr17	+	5467	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.352652227935	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658337	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.29	chr17	+	4480	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-306	-1240	-22	-857	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTACATTGTTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	83658337	83786836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.3	chr17	+	5298	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-116	-101	-56	4	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCCTTTGTTTGGTC	NA	False	NA	20	True	GATAAA	-23	NA	83658303	83787794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.30	chr17	+	5329	23	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-21	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.084849931951	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658338	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83733956_83734048_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.31	chr17	+	5585	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	132.736731655392	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658338	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.33	chr17	+	5142	23	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-17	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	119.171381555381	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658342	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134_83787138_83787229
ES.15833.36	chr17	+	5169	21	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	127.200393081154	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658344	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752173_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.37	chr17	+	5846	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-14	-15	intron_retention	FALSE	canonical	1	3	junction_7	143.989775871607	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658345	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735678_83741046_83741146_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.38	chr17	+	5594	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.016501126935	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658345	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83689917_83690086_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.39	chr17	+	5220	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	123.333192567487	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658347	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134_83786993_83787229
ES.15833.4	chr17	+	5467	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-339	-2194	-55	0	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658304	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.40	chr17	+	5181	23	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	119.171381555381	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658347	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658548_83658616_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.41	chr17	+	4509	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	-11	943	-11	-850	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTTCCTACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	83658348	83786843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.44	chr17	+	5202	23	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-6	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	131.845357700252	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658353	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770980_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.45	chr17	+	5562	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	165.624932143225	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658354	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658698_83717454_83717638_83729034_83729165_83732686_83732861_83733351_83733454_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.46	chr17	+	5483	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.019403708221	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658354	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.47	chr17	+	6058	27	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-5	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	162.129454631697	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTGCCTTTGTTTGG	NA	False	NA	18	True	GATAAA	-21	NA	83658354	83787792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710162_83710235_83710303_83710378_83710809_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.48	chr17	+	7235	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-5	0	intron_retention	FALSE	canonical	3	134	junction_5	97.0007668027969	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATGTTTCCTTTGCCT	NA	False	NA	10	True	GATAAA	-13	NA	83658354	83787784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.49	chr17	+	5322	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.158586879207	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658355	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658499_83658571_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.5	chr17	+	5370	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	120.731756488479	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658305	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.50	chr17	+	5203	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.158586879207	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658355	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658438_83658629_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.53	chr17	+	5507	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	130.140595776979	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658366	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83733351_83733454_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.54	chr17	+	5381	22	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	7	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.993279530843	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658366	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83747436_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.55	chr17	+	5432	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.929399292198	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658366	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717632_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.58	chr17	+	5499	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	12	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	163.29645302026	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658371	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83733956_83734048_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781084_83781178_83784632_83784764_83785134
ES.15833.59	chr17	+	4895	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	17	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.019403708221	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGTCTCTTTCAAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	83658376	83787224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.6	chr17	+	5938	26	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-49	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	167.789630192095	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658310	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710165_83710235_83710468_83710534_83710809_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.60	chr17	+	5287	24	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.028757651554	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658376	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.61	chr17	+	5209	14	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	21	-23798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	172.976586300817	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTTTCATTTTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	83658380	83761798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83689917_83690086_83717454_83717632_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367
ES.15833.62	chr17	+	5505	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	137.289434731479	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCAAAATGTTTCCTTT	NA	False	NA	6	True	GATAAA	-9	NA	83658380	83787780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83733956_83734048_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.63	chr17	+	5341	23	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	140.354576073577	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658380	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83756708_83756833_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.64	chr17	+	4647	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-39	473	21	-473	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACATAGGTCTCTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	83658380	83787220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.65	chr17	+	7829	21	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	23	0	intron_retention	FALSE	non_canonical	0	0	junction_18	111.108449273671	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658382	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781077_83781178_83784632_83784764_83785134
ES.15833.66	chr17	+	5065	20	NNC	ENSMUSG00000032624.17	novel	5052	21	NA	NA	-25	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.221651412538	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658385	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729175_83747440_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.67	chr17	+	813	5	ISM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	-22	40131	-22	-37943	5prime_fragment	FALSE	canonical	3	67	junction_3	156.189788398602	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATTCTCCTTACGCC	NA	False	NA	NA	False	AATAAA	-18	NA	83658388	83747653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459
ES.15833.68	chr17	+	5682	23	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-22	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.247714732196	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658388	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658954_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.7	chr17	+	5413	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-44	-15	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	138.655793645744	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658315	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.70	chr17	+	5271	23	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.09550997467	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658388	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83734651_83734803_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.71	chr17	+	5452	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.127902723745	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658391	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710013_83710086_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.72	chr17	+	2408	17	ISM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	-27	18372	-18	-16275	5prime_fragment	FALSE	canonical	3	110	junction_3	100.930591868868	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGCAAGCTTCTCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	83658392	83769321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957
ES.15833.73	chr17	+	4786	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-15	-471	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	138.655793645744	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGGTCTCTTTCAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	83658395	83787222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.74	chr17	+	10730	23	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-14	-15	intron_retention	FALSE	canonical	0	0	junction_2	153.882696550069	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658396	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83734781_83735428_83735455_83735644_83735678_83747462_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.75	chr17	+	5394	22	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.993279530843	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658396	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734821_83747454_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.76	chr17	+	5174	22	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	132.778539642403	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658396	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734658_83734761_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.78	chr17	+	5216	22	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-11	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	146.966437620458	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658399	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83689917_83690086_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.79	chr17	+	7162	22	NIC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-10	0	intron_retention	FALSE	canonical	3	198	junction_5	76.3743317401392	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658400	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.8	chr17	+	5324	22	NIC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	107.575402021937	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658318	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.81	chr17	+	11322	20	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	198	junction_3	63.3910171288612	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658410	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_83658669_83717454_83717638_83729034_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.82	chr17	+	5223	21	NNC	ENSMUSG00000032624.17	novel	5052	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.12653090443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658410	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732878_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.83	chr17	+	5011	20	NNC	ENSMUSG00000032624.17	novel	5052	21	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	132.041943306829	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658411	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781077_83781178_83784632_83784764_83785134
ES.15833.84	chr17	+	2817	20	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	2	-14031	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_19	120.591685329616	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTTGCCTATCTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	83658412	83771565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83771133
ES.15833.85	chr17	+	5543	26	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	4	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	173.551541623807	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	NA	False	NA	-5	True	NA	NA	NA	83658414	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710165_83710235_83710468_83710534_83710809_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134_83786993_83787229
ES.15833.87	chr17	+	5096	22	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	132.51743563886	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658414	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734005_83734048_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.88	chr17	+	5488	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	137.798256066614	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658418	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83733351_83733454_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.89	chr17	+	5604	26	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	146.778200016215	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658418	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83741046_83741146_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.9	chr17	+	5709	24	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.127902723745	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658318	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83667121_83667378_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.90	chr17	+	5328	23	NNC	ENSMUSG00000032624.17	novel	2934	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	114.565050632583	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658436	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758508_83761840_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.91	chr17	+	5336	25	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	165.490049843555	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTTCCTTTGCCTTT	NA	False	NA	12	True	GATAAA	-15	NA	83658442	83787786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83658669_83710052_83710086_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.92	chr17	+	329	1	Intergenic	novelGene_13185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATGATATGTGAAATAAA	7606	False	NA	NA	False	NA	NA	NA	83713841	83714170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83713800_83714200
ES.15833.93	chr17	+	4801	20	ISM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	59043	-6	-46276	0	3prime_fragment	FALSE	canonical	3	67	junction_2	98.2525718087624	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83717453	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.94	chr17	+	4532	22	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	58810	-1622	-46276	-475	3prime_fragment	FALSE	canonical	3	198	junction_3	86.4311294387295	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACATAGGTCTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	83717453	83787218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.95	chr17	+	7409	20	ISM	ENSMUSG00000032624.17	ENSMUST00000234460.2	5286	24	72904	566	-32404	-469	3prime_fragment	FALSE	canonical	3	134	junction_2	96.0747342990712	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGTCTCTTTCAAAGGG	2128	False	NA	NA	False	AATAAA	-22	NA	83731325	83787224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.96	chr17	+	7944	20	ISM	ENSMUSG00000032624.17	ENSMUST00000234460.2	5286	24	72935	0	-32373	0	3prime_fragment	FALSE	canonical	3	134	junction_2	96.0747342990712	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	2159	False	NA	16	True	GATAAA	-19	NA	83731356	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.97	chr17	+	6969	19	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-31417	-15	intron_retention	FALSE	canonical	0	0	junction_1	116.765672276668	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	3115	False	NA	-5	True	NA	NA	NA	83732312	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.98	chr17	+	7713	21	NNC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	-31297	-15	intron_retention	FALSE	canonical	1	3	junction_3	155.308370669452	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGATAATCAAA	3235	False	NA	-5	True	NA	NA	NA	83732432	83787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83735455_83735644_83735678_83741046_83741146_83741231_83741351_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ES.15833.99	chr17	+	5664	20	NNC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	-31245	0	intron_retention	FALSE	canonical	0	0	junction_19	111.182737455206	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	3287	False	NA	16	True	GATAAA	-19	NA	83732484	83787790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134_83785821_83786939
ES.15834.1	chr17	-	5594	1	Intergenic	novelGene_13184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGAAGTCATCTTAACT	NA	False	NA	NA	False	NA	NA	NA	83677944	83672350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83672400_83677900
ES.15835.1	chr17	+	185	1	Intergenic	novelGene_13187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAATTGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	83790482	83790667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83790500_83790700
ES.15836.1	chr17	+	148	1	Intergenic	novelGene_13189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAATAAATAA	7647	False	NA	NA	False	NA	NA	NA	83818566	83818714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83818600_83818700
ES.15837.1	chr17	-	536	4	NNC	ENSMUSG00000024248.15	novel	1076	3	NA	NA	0	19357	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	606.697618258058	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTGGCTCCTTGGTGGC	9947	False	NA	NA	False	AATAAA	-18	NA	83821759	83789989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_83790128_83793706_83793849_83811528_83811658_83821632
ES.15837.2	chr17	-	3891	3	NNC	ENSMUSG00000024248.15	novel	1076	3	NA	NA	33	19166	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	643.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGTCTTGGTCTCAT	9980	False	NA	NA	False	NA	NA	NA	83821726	83790180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_83793849_83811528_83811658_83821632
ES.15837.3	chr17	-	1074	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	644	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTTTGTTTTTTGTT	9947	False	NA	-25	True	AATAAA	-21	NA	83821759	83809348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_83810167_83811528_83811658_83821632
ES.15837.4	chr17	-	1133	4	FSM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	0	-4	0	4	multi-exon	FALSE	canonical	0	0	junction_1	605.058858477605	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTTTTTAGTTTGTTT	9947	False	NA	-35	True	AATAAA	-11	NA	83821759	83809358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_83810167_83811359_83811429_83811528_83811658_83821632
ES.15837.5	chr17	-	1094	4	NNC	ENSMUSG00000024248.15	novel	1129	4	NA	NA	-5383	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.816496580927726	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTTTTTAGTTTGTTT	7189	False	NA	-35	True	AATAAA	-11	NA	83830142	83809358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_83810167_83811528_83811658_83827985_83828046_83830045
ES.15837.7	chr17	-	179	1	Intergenic	novelGene_13188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAACCTGTC	NA	False	NA	NA	False	NA	NA	NA	83813236	83813057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83813100_83813200
ES.15838.1	chr17	+	291	2	Intergenic	novelGene_13190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGAATTGTGGTGGTGG	3222	False	NA	NA	False	NA	NA	NA	83830325	83831106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83830417_83830906
ES.15839.1	chr17	-	4290	2	Intergenic	novelGene_13191	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTCCGATGTTTTTCT	3262	False	NA	NA	False	AAGAAA	-2	NA	83871433	83863144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83867187_83871185
ES.1584.1	chr1	+	4062	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACAGCCAATAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	151979082	151983144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_151979100_151983100
ES.15840.1	chr17	-	177	1	Intergenic	novelGene_13192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83886853	83886676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83886700_83886900
ES.15841.1	chr17	+	161	1	Intergenic	novelGene_13193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGAATAAATCTTA	2228	False	NA	NA	False	NA	NA	NA	83920168	83920329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83920200_83920300
ES.15842.1	chr17	+	4094	2	Antisense	novelGene_ENSMUSG00000045053.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCTGAAGAGATGGCTC	7662	False	NA	NA	False	NA	NA	NA	83925602	83930503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_83929616_83930422
ES.15843.1	chr17	-	4012	2	FSM	ENSMUSG00000045053.3	ENSMUST00000234613.2	3323	2	-144	-545	-144	545	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACTCCTCCTGCCTCGT	NA	False	NA	NA	False	NA	NA	NA	83939468	83892840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_83895809_83938424
ES.15843.2	chr17	-	3957	1	Intergenic	novelGene_13194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTCATTTTAAATGC	NA	False	NA	NA	False	AGTAAA	-24	NA	83936848	83932891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83932900_83936800
ES.15844.1	chr17	+	173	1	Intergenic	novelGene_13195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATATTAATAA	NA	False	NA	NA	False	NA	NA	NA	83963496	83963669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_83963500_83963700
ES.15845.1	chr17	-	169	1	Intergenic	novelGene_13196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACACCACCACCACAA	NA	False	NA	NA	False	NA	NA	NA	83992805	83992636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_83992600_83992800
ES.15846.1	chr17	+	2047	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	-321	-3	-321	1	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84013270	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.10	chr17	+	2116	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	426.249175219143	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84013596	84122334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
ES.15846.12	chr17	+	1801	15	NNC	ENSMUSG00000055817.19	novel	1723	14	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	384.945159094388	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	84013620	84100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84090829_84090936_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.13	chr17	+	1994	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	31	-297	3	297	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGGAATTGTATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	84013622	84100601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ES.15846.15	chr17	+	1827	15	NNC	ENSMUSG00000055817.19	novel	2674	16	NA	NA	21	69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	375.520706513513	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGTTGTTGAATTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	84013640	84107738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099968_84100194_84107478
ES.15846.16	chr17	+	1683	14	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	297.452915074622	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	84013646	84100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096335_84096472_84099081_84099231_84099970
ES.15846.18	chr17	+	5313	17	NIC	ENSMUSG00000055817.19	novel	3287	17	NA	NA	43	2196	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	430.741144533176	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCTTGTGTCACGACA	NA	False	NA	NA	False	AATAAA	-11	NA	84013662	84131141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84127608
ES.15846.2	chr17	+	2150	15	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	464.522143098229	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTGTTTTTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	84013299	84100302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015254_84015391_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070439_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ES.15846.21	chr17	+	4249	13	NIC	ENSMUSG00000055817.19	novel	1723	14	NA	NA	56	0	intron_retention	FALSE	canonical	3	649	junction_11	130.519474919773	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTGTTTTTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	84013675	84100302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84099231_84099970
ES.15846.22	chr17	+	1622	14	NNC	ENSMUSG00000055817.19	novel	1723	14	NA	NA	60	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	304.196429064546	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTACAGCCTTTGTT	NA	False	NA	3	True	AATAAA	-8	NA	84013679	84100295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045879_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.23	chr17	+	1630	14	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	61	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	346.352951285109	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGCCTTTGTTTTTTTT	NA	False	NA	9	True	AATAAA	-14	NA	84013680	84100301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061341_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ES.15846.24	chr17	+	1617	14	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	63	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	427.86924950802	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	84013682	84100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063091_84070339_84070439_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ES.15846.25	chr17	+	1955	14	NNC	ENSMUSG00000055817.19	novel	882	8	NA	NA	262	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	306.427168292003	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84013881	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84014234_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.26	chr17	+	8780	11	NIC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	2225	0	intron_retention	FALSE	canonical	3	933	junction_2	85.1227936571633	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84015844	84100304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84099231_84099970
ES.15846.27	chr17	+	1704	12	NIC	ENSMUSG00000055817.19	novel	882	8	NA	NA	101	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	326.775531418563	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84036693	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84036957_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.28	chr17	+	1508	11	NNC	ENSMUSG00000055817.19	novel	882	8	NA	NA	-11602	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	337.572273742972	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84051460	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84051655_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.29	chr17	+	3661	1	Intergenic	novelGene_13199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAGAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	84056096	84059757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84056100_84059800
ES.15846.30	chr17	+	175	1	Intergenic	novelGene_13200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAATGGCATAG	NA	False	NA	NA	False	NA	NA	NA	84071810	84071985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84071800_84072000
ES.15846.31	chr17	+	2020	3	ISM	ENSMUSG00000055817.19	ENSMUST00000176054.3	765	6	-1416	27342	-1416	1	5prime_fragment	FALSE	canonical	3	1051	junction_2	117.5	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	8317	False	NA	11	True	AATAAA	-16	NA	84094933	84100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_84096472_84099081_84099231_84099970
ES.15846.32	chr17	+	203	1	Intergenic	novelGene_13203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATGTCGGCTGTAA	741	False	NA	NA	False	CATAAA	-24	NA	84101590	84101793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84101600_84101800
ES.15846.6	chr17	+	1708	14	NNC	ENSMUSG00000055817.19	novel	1723	14	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	309.417605248748	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	84013589	84100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063097_84070348_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.7	chr17	+	5577	18	NIC	ENSMUSG00000055817.19	novel	3287	17	NA	NA	-2	2199	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	443.024037246124	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTGTCACGACATTC	NA	False	NA	NA	False	AATAAA	-14	NA	84013589	84131144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84125790_84125982_84127608
ES.15846.8	chr17	+	1720	14	NNC	ENSMUSG00000055817.19	novel	1723	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	309.417605248748	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84013592	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063110_84070348_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ES.15846.9	chr17	+	1694	14	NNC	ENSMUSG00000055817.19	novel	1728	14	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	296.451418932314	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGTTTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	84013593	84100305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096379_84096472_84099081_84099231_84099970
ES.15847.1	chr17	-	4056	1	Intergenic	novelGene_13197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	84034215	84030159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84030200_84034200
ES.15848.1	chr17	-	3078	1	Antisense	novelGene_ENSMUSG00000055817.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATCACAGGCTGCAACC	2822	False	NA	NA	False	NA	NA	NA	84047210	84044132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_84044100_84047200
ES.15848.2	chr17	-	5455	1	Intergenic	novelGene_13198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTCATGTACTATTCT	NA	False	NA	NA	False	AATAAA	-14	NA	84052478	84047023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84047000_84052500
ES.15849.1	chr17	-	2049	1	Intergenic	novelGene_13201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGCTACGAGTTTTTCAT	4120	False	NA	NA	False	NA	NA	NA	84079531	84077482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84077500_84079500
ES.15849.2	chr17	-	6364	1	Antisense	novelGene_ENSMUSG00000055817.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCCTGACCGCCTGA	NA	False	NA	NA	False	NA	NA	NA	84085417	84079053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_84079100_84085400
ES.1585.1	chr1	+	176	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	152186581	152186757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_152186600_152186800
ES.15850.1	chr17	-	161	1	Intergenic	novelGene_13202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTCCAGGTTGTGAG	9076	False	NA	NA	False	NA	NA	NA	84094439	84094278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84094300_84094400
ES.15851.1	chr17	-	1399	11	NNC	ENSMUSG00000000673.10	novel	1381	10	NA	NA	-364	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.89736659610103	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTACTTGCGAGTTTT	6631	False	NA	NA	False	AATAAA	-13	NA	84154605	84138784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84139151_84139255_84139339_84139755_84139825_84142207_84142354_84142619_84142664_84142903_84142994_84145900_84146008_84146229_84146314_84150624_84150704_84154065_84154252_84154460
ES.15852.1	chr17	-	2856	3	Intergenic	novelGene_13204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCGCCTTGGTCATGGTG	168	False	NA	NA	False	NA	NA	NA	84187778	84178529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84180797_84182041_84182235_84187382
ES.15853.1	chr17	-	150	1	Intergenic	novelGene_13205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	84259185	84259035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84259000_84259200
ES.15854.1	chr17	+	3288	2	NIC	ENSMUSG00000117431.2	novel	440	3	NA	NA	-100	0	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTGGGATGGTTGCTC	2378	False	NA	NA	False	ATTAAA	-15	NA	84316222	84320837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84319229_84320555
ES.15854.2	chr17	+	403	2	NIC	ENSMUSG00000117431.2	novel	440	3	NA	NA	-42	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGGTTGCTCTGGA	2436	False	NA	NA	False	ATTAAA	-19	NA	84316280	84320841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84316398_84320555
ES.15854.3	chr17	+	4235	1	Genic_Genomic	ENSMUSG00000117431.2	novel	NA	NA	NA	NA	284	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGGTTGCTCTGGA	2762	False	NA	NA	False	ATTAAA	-19	NA	84316606	84320841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_84316600_84320800
ES.15855.1	chr17	+	164	1	Intergenic	novelGene_13206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	84388767	84388931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84388800_84388900
ES.15856.1	chr17	+	183	1	Intergenic	novelGene_13207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGTTACCCTGGC	NA	False	NA	NA	False	AATAAA	-9	NA	84438217	84438400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84438200_84438400
ES.15857.1	chr17	+	173	1	Intergenic	novelGene_13208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84480723	84480896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84480700_84480900
ES.15858.1	chr17	+	3083	2	NNC	ENSMUSG00000117393.2	novel	365	4	NA	NA	-3	-20971	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACGGTCTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	84493180	84502513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84493216_84499465
ES.15858.2	chr17	+	1947	2	NNC	ENSMUSG00000117393.2	novel	365	4	NA	NA	1	-22176	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCGGTCATTCAAATTT	NA	False	NA	NA	False	NA	NA	NA	84493184	84501308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84493289_84499465
ES.15859.1	chr17	+	204	1	Intergenic	novelGene_13210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTAAGCCAGCATGTGG	9529	False	NA	NA	False	NA	NA	NA	84521763	84521967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84521800_84522000
ES.1586.1	chr1	-	1139	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	-2	-4	-2	4	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTAATCATCCATCATTGC	NA	False	NA	-1	True	AATAAA	-33	NA	152262435	152246481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
ES.1586.2	chr1	-	3798	4	ISM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	13	0	13	0	intron_retention	FALSE	canonical	3	365	junction_3	44.2518047340696	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	False	NA	-5	True	AATAAA	-29	NA	152262420	152246485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449
ES.1586.3	chr1	-	965	4	NIC	ENSMUSG00000014980.15	novel	1133	5	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	209.892565111032	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTGTCGTAATCATC	NA	False	NA	-10	True	AATAAA	-24	NA	152262352	152246490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152247035_152247504_152247647_152259012_152259149_152262209
ES.1586.4	chr1	-	872	5	NNC	ENSMUSG00000014980.15	novel	1133	5	NA	NA	9	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.674562050959	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATATCTTGAA	NA	False	NA	-26	True	AATAAA	-8	NA	152262362	152246506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152246895_152247533_152247647_152259012_152259149_152259449_152259532_152262209
ES.1586.5	chr1	-	1100	5	NNC	ENSMUSG00000014980.15	novel	1133	5	NA	NA	5	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	184.305961650729	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATATCTTGAA	NA	False	NA	-26	True	AATAAA	-8	NA	152262428	152246506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259525_152262209
ES.1586.6	chr1	-	3364	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	152259011	152255647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152255600_152259000
ES.15860.1	chr17	+	5462	1	Intergenic	novelGene_13211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCGCACA	2589	False	NA	NA	False	NA	NA	NA	84629111	84634573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84629100_84634600
ES.15860.2	chr17	+	2557	1	Intergenic	novelGene_13212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTGTACACAGGTGTG	5650	False	NA	NA	False	NA	NA	NA	84632172	84634729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_84632200_84634700
ES.15861.1	chr17	+	1293	1	Antisense	novelGene_ENSMUSG00000024251.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84765050	84766343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_84765000_84766300
ES.15862.1	chr17	-	4094	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	-556	-8	-556	8	multi-exon	FALSE	canonical	3	151	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGTAATGGTTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	84495931	84491350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_84494585_84495071
ES.15862.10	chr17	-	3336	3	NNC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84495372	84491358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84493135_84493325_84494585_84495071
ES.15862.11	chr17	-	2810	2	NNC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	1038	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84494337	84491358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84494005_84494173
ES.15862.12	chr17	-	2887	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	-124	767	-124	-767	multi-exon	FALSE	canonical	3	151	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTCATTAATTTCT	NA	False	NA	NA	False	AAGAAA	-28	NA	84495499	84492125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_84494585_84495071
ES.15862.13	chr17	-	3231	1	NIC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	3	-783	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATTGTATGTAATATT	NA	False	NA	NA	False	AAGAAA	-12	NA	84495372	84492141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84492100_84495400
ES.15862.14	chr17	-	7935	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-111	-40	-22	40	multi-exon	TRUE	canonical	2	39	junction_31	15.529655412283	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAGAGCAGGCTTATG	NA	False	NA	1	True	AATAAA	-37	NA	84773655	84497463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.15	chr17	-	7921	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-22	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	18.4860123220366	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGCTGTCCCAAAGCAT	NA	False	NA	-18	True	AATAAA	-38	NA	84773655	84497482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759321_84762027_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.16	chr17	-	4012	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13758	18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCATGCTGTCCCAAAG	NA	False	NA	-21	True	AATAAA	-35	NA	84662450	84497485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
ES.15862.17	chr17	-	3860	11	NIC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	-25	18	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	28.6092642338107	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCATGCTGTCCCAAAG	NA	False	NA	-21	True	AATAAA	-35	NA	84621132	84497485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84620951
ES.15862.19	chr17	-	7763	37	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-17	5	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	18.7461107077353	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCACATTGGCAGGCA	NA	False	NA	-34	True	AATAAA	-22	NA	84773650	84497498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.2	chr17	-	6671	1	Genic_Genomic	ENSMUSG00000024251.11_ENSMUSG00000045817.9	novel	NA	NA	NA	NA	-2647	7	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	84498022	84491351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_84491400_84498000
ES.15862.21	chr17	-	5371	23	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	17	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	21.4803869796004	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCACATTGGCAGGCA	NA	False	NA	-34	True	AATAAA	-22	NA	84743099	84497498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730612_84733563_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983
ES.15862.22	chr17	-	7848	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-17	5	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCACATTGGCAGGCA	NA	False	NA	-34	True	AATAAA	-22	NA	84773650	84497498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.23	chr17	-	6300	27	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-8580	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	19.0173153737237	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTCACATTGGCAGGCA	NA	False	NA	-34	True	AATAAA	-22	NA	84751696	84497498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245
ES.15862.27	chr17	-	7574	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-14	-266	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTTGGGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	84773647	84497769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.28	chr17	-	3702	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13773	-277	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGTTTAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	84662435	84497780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
ES.15862.29	chr17	-	2698	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	13731	138	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCCAAGTCCTTCAG	NA	False	NA	21	True	NA	NA	NA	84662477	84498826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
ES.15862.3	chr17	-	3392	3	NNC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	-43	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	84495418	84491351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84493476_84493663_84494585_84495071
ES.15862.30	chr17	-	6625	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-164	1323	-75	138	multi-exon	FALSE	canonical	2	39	junction_31	15.529655412283	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCCAAGTCCTTCAG	NA	False	NA	21	True	NA	NA	NA	84773708	84498826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.32	chr17	-	2755	13	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	65	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.3849704693158	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTGCATTTTACTAT	6795	False	NA	0	True	AGTAAA	-43	NA	84676143	84498847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84675927
ES.15862.33	chr17	-	6342	36	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-45	107	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	19.1026443302534	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACATGCAAATACTTGC	NA	False	NA	-10	True	AGTAAA	-33	NA	84773678	84498857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.34	chr17	-	6496	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-47	84	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCTGGGAATATTAAGA	NA	False	NA	-33	True	AGTAAA	-10	NA	84773680	84498880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.35	chr17	-	6540	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-16	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	18.6352478290695	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTATGTTTGATTCTGGGA	NA	False	NA	-42	True	AGTAAA	-1	NA	84773560	84498889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773348
ES.15862.37	chr17	-	6252	37	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	10	71	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	19.1622378135929	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTATGTTTGATTCT	NA	False	NA	-46	True	TATAAA	-18	NA	84773623	84498893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.38	chr17	-	6474	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	37	70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	18.6352478290695	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGGTATGTTTGATTC	NA	False	NA	-47	True	TATAAA	-17	NA	84773596	84498894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773492
ES.15862.4	chr17	-	3424	3	NNC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	-76	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	84495451	84491351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84493469_84493657_84494585_84495071
ES.15862.40	chr17	-	6669	40	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-5	69	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	28.858083003469	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGGGTATGTTTGATT	NA	False	NA	-48	True	TATAAA	-16	NA	84773638	84498895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84565087_84565218_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84746867_84746962_84747422_84747546_84748364_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762032_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.43	chr17	-	2384	11	NNC	ENSMUSG00000024251.11	novel	2556	13	NA	NA	3048	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.8679753360017	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGGGTATGTTTGATT	NA	False	NA	-48	True	TATAAA	-16	NA	84641254	84498895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641139
ES.15862.45	chr17	-	6340	37	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-5	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	21.2372510776073	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAAGGGTATGTTTGAT	NA	False	NA	-49	True	TATAAA	-15	NA	84773638	84498896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759321_84762032_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84773521
ES.15862.47	chr17	-	4630	27	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-8280	67	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	19.9671698000113	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAAGGGTATGTTTGA	NA	False	NA	-50	True	TATAAA	-14	NA	84751396	84498897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245
ES.15862.48	chr17	-	3321	19	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	12508	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	28.7849090263339	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAAGGGTATGTTTGA	NA	False	NA	-50	True	TATAAA	-14	NA	84730608	84498897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84726823_84726935_84730459
ES.15862.50	chr17	-	5885	37	ISM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-97	2964	-8	-1503	5prime_fragment	FALSE	canonical	2	39	junction_30	15.5310074160701	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTATCAGTTGATCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	84773641	84500467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.51	chr17	-	178	1	Intergenic	novelGene_13209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATAGAATT	NA	False	NA	NA	False	NA	NA	NA	84517579	84517401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84517400_84517600
ES.15862.52	chr17	-	6639	35	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	9	586	intron_retention	FALSE	canonical	2	26	junction_34	15.5104608075862	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGTATGAATG	NA	False	NA	NA	False	NA	NA	NA	84773624	84529385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84530234_84533315_84533470_84536564_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.53	chr17	-	3686	26	NNC	ENSMUSG00000024251.11	novel	4412	15	NA	NA	-8202	-385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.6534839676022	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTGTCGCTT	NA	False	NA	NA	False	NA	NA	NA	84751318	84530356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84530565_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245
ES.15862.54	chr17	-	2802	1	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-24037	19211	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAACATTCTAACTTGTAC	NA	False	NA	NA	False	NA	NA	NA	84561325	84558523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84558500_84561300
ES.15862.55	chr17	-	5707	30	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-13	19211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.330821721087	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAACATTCTAACTTGTAC	NA	False	NA	NA	False	NA	NA	NA	84773646	84558523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.56	chr17	-	4263	23	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	10	19194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	23.2017739418689	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	84773623	84558540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694026_84700783_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751388_84771815_84771930_84773521
ES.15862.57	chr17	-	5805	31	ISM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-79	61038	10	19193	5prime_fragment	FALSE	canonical	2	39	junction_24	13.0008546727599	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTCAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	84773623	84558541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.58	chr17	-	5754	31	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	9	19188	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_30	14.2306789093923	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATCTTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84773624	84558546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.59	chr17	-	5812	32	NNC	ENSMUSG00000024251.11	novel	4412	15	NA	NA	13	1783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.2739413701728	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGGTTTGTTATCTTG	NA	False	NA	NA	False	NA	NA	NA	84773620	84575951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84577241_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84746867_84746962_84747422_84747535_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.60	chr17	-	9344	1	NIC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	34055	26	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGAAACAACAAAC	NA	False	NA	NA	False	NA	NA	NA	84587052	84577708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_84577700_84587100
ES.15862.61	chr17	-	5105	1	FSM	ENSMUSG00000065732.3	ENSMUST00000083798.3	107	1	-5007	9	-5007	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84600182	84595077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_84595100_84600200
ES.15862.62	chr17	-	2457	1	Intergenic	novelGene_13213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCGAAAAACCAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	84685145	84682688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_84682700_84685100
ES.15862.63	chr17	-	4230	27	NNC	ENSMUSG00000024251.11	novel	2397	11	NA	NA	-52	62062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4751302574485	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCATTTGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	84773685	84688737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84688973_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.64	chr17	-	4227	27	NNC	ENSMUSG00000024251.11	novel	2397	11	NA	NA	-7	62057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.5064090117002	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAATGTGCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	84773640	84688742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84688973_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ES.15862.65	chr17	-	8621	26	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-33	61506	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_25	13.0798165124745	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCACCTTCTTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84773666	84689293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.66	chr17	-	3563	20	NNC	ENSMUSG00000024251.11	novel	2397	11	NA	NA	14228	60408	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.4789148797619	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTTTTATATGTG	NA	False	NA	NA	False	AATAAA	-18	NA	84759316	84690391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84690687_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136
ES.15862.67	chr17	-	3894	4	ISM	ENSMUSG00000024251.11	ENSMUST00000234724.2	4412	15	37475	112658	-29433	60407	internal_fragment	FALSE	canonical	3	55	junction_3	14.2361043360417	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCCTTGTTTTATATGT	NA	False	NA	NA	False	AATAAA	-17	NA	84705641	84690392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_84694031_84700787_84700911_84702490_84702605_84705622
ES.15862.68	chr17	-	3928	15	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-5351	52385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.7372912961972	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTATAACACCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	84748467	84698414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84698841_84699018_84699875_84699922_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366
ES.15862.69	chr17	-	3794	21	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	-25	20738	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_20	12.2081939696255	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTGGCTGACTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	84773658	84730061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15862.7	chr17	-	3326	3	NNC	ENSMUSG00000045817.9	novel	3530	2	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	84495375	84491351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84493472_84493682_84494585_84495071
ES.15862.70	chr17	-	2307	11	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_10	13.186735759846	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84773630	84750798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
ES.15863.1	chr17	+	4770	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	-42	2154	-42	-2154	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGTGTCTTAGACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	84819280	84927412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ES.15863.2	chr17	+	6733	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	-42	191	-42	-191	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGAACAATCAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	84819280	84929375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ES.15863.3	chr17	+	6890	30	NNC	ENSMUSG00000040852.7	novel	6882	30	NA	NA	-20	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.55405299132982	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCGAACATTATCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	84819302	84929557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84819393_84829126_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ES.15863.5	chr17	+	6006	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	3	873	3	-873	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGTCGTCATTGTCT	NA	False	NA	NA	False	AATGAA	-14	NA	84819325	84928693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ES.15863.6	chr17	+	4881	20	NNC	ENSMUSG00000040852.7	novel	663	3	NA	NA	-2251	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.11051975323825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCGAACATTATCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	84880726	84929557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84880775_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ES.15864.1	chr17	+	1373	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	-25	6	-25	-6	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCAACATCTAAGTATA	NA	False	NA	10	True	AATAAA	-18	NA	84933898	84963010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ES.15864.2	chr17	+	1337	13	NNC	ENSMUSG00000024253.10	novel	1354	13	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.7119718639791	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCAACATCTAAGTATA	NA	False	NA	10	True	AATAAA	-18	NA	84933927	84963010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951539_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ES.15864.3	chr17	+	3188	1	NIC	ENSMUSG00000024253.10	novel	1354	13	NA	NA	3120	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCAACATCTAAGTATA	1817	False	NA	10	True	AATAAA	-18	NA	84959822	84963010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_84959800_84963000
ES.15865.1	chr17	+	173	1	Intergenic	novelGene_13214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATTCTAAT	NA	False	NA	NA	False	NA	NA	NA	85018654	85018827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85018700_85018800
ES.15866.1	chr17	-	4380	1	Genic_Genomic	ENSMUSG00000024120.13	novel	NA	NA	NA	NA	23147	1589	mono-exon	FALSE	NA	NA	NA	NA	NA	710	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAACCATGAGAATACAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	85015465	85011085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_85011100_85015500
ES.15866.14	chr17	-	4360	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	109.789366033707	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85097995	85012674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85048013_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.18	chr17	-	4390	37	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	111.202143264717	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85097988	85012674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062036_85069365_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.2	chr17	-	4720	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	-247	-80	-16	80	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCGGGGGTTGTTTATT	NA	False	NA	74	True	AATATA	-18	NA	85098233	85012594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.20	chr17	-	7860	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	8	-4	intron_retention	FALSE	canonical	3	476	junction_24	55.3160671410271	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097978	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.23	chr17	-	2164	17	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	157.275186774647	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097984	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047534_85082808_85082940_85084368_85084563_85097792
ES.15866.24	chr17	-	4384	37	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	144.66080750637	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097995	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062036_85069365_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078860_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.25	chr17	-	4570	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	32	-4	intron_retention	FALSE	canonical	3	476	junction_24	55.9381823704845	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097954	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.27	chr17	-	4372	37	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	13	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	145.338565463923	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097973	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038661_85039172_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062050_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.28	chr17	-	4401	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	142.736564369082	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85098005	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078860_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084565_85097792
ES.15866.34	chr17	-	4035	35	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	113.407355906495	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097998	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058708_85060886_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.35	chr17	-	6452	34	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-38	-4	intron_retention	FALSE	canonical	0	0	junction_7	115.517019603961	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85098028	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024080_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85039246_85047497_85048097_85056388_85056597_85057935_85058022_85058651_85059851_85060156_85060202_85060541_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.36	chr17	-	5438	4	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	17924	-4	intron_retention	FALSE	canonical	3	622	junction_3	13.2748718344933	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85020688	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85017835_85017962_85018103_85020120
ES.15866.38	chr17	-	4350	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-24	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_24	109.909344658268	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85098014	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.40	chr17	-	4267	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	18	junction_35	108.610159131946	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097987	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85084368_85084563_85097792
ES.15866.41	chr17	-	4372	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-36	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_31	108.595368137909	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85098026	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078359_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.44	chr17	-	4326	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	108.674374158609	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097998	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.46	chr17	-	4838	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	109.747242644537	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097981	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85083914_85084563_85097792
ES.15866.5	chr17	-	5388	7	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	73263	0	13889	0	intron_retention	FALSE	canonical	3	622	junction_6	30.5418656200887	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85024723	85012674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120
ES.15866.50	chr17	-	4472	39	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	141.670445878655	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097955	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097174_85097289_85097792
ES.15866.51	chr17	-	4339	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	109.865892086551	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097951	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077796_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.52	chr17	-	4336	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	32	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	109.815111236811	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097954	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078291_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.54	chr17	-	4382	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	109.846276809245	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097986	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097799
ES.15866.55	chr17	-	4388	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-2	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	109.776338124295	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097988	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038657_85039172_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.57	chr17	-	4315	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.635607349215	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85098005	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056504_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.59	chr17	-	4352	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	626	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_36	143.366515035098	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	5894	False	NA	-10	True	AATAAA	-12	NA	85084345	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85083914_85084190_85084269
ES.15866.61	chr17	-	4370	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.335739222996	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097973	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033736_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.63	chr17	-	4417	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	109.815111236811	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097993	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077949_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.66	chr17	-	4391	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	109.815111236811	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTATGTATTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	85097995	85012678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077921_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.69	chr17	-	4434	39	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	141.490130622994	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTATTTT	NA	False	NA	-11	True	AATAAA	-11	NA	85097981	85012679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85026319_85026371_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.71	chr17	-	4419	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	109.766090367629	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTATTTT	NA	False	NA	-11	True	AATAAA	-11	NA	85097989	85012679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082788_85082940_85084368_85084563_85097792
ES.15866.72	chr17	-	3628	6	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	17771	-6	intron_retention	FALSE	canonical	3	622	junction_5	33.2890372345011	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTGTTTATGTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	85020841	85012680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85017835_85017962_85018103_85020120
ES.15866.75	chr17	-	3926	2	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	21094	-9	intron_retention	FALSE	canonical	3	674	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAAGTGTTTATGTA	NA	False	NA	-15	True	AATAAA	-7	NA	85017518	85012683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85014607_85015515
ES.15866.77	chr17	-	4257	37	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	145.290202889099	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAAGTGTTTATGTA	NA	False	NA	-15	True	AATAAA	-7	NA	85097980	85012683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060152_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.78	chr17	-	4379	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	-9	23	-5	-23	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACCAATGAAAATG	NA	False	NA	-29	True	NA	NA	NA	85097995	85012697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.81	chr17	-	5643	34	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	0	3265	0	-3265	5prime_fragment	FALSE	canonical	3	476	junction_21	47.7235496383352	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATCCCTAGCTCACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	85097986	85015939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.82	chr17	-	2766	1	Intergenic	novelGene_13215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	667	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGACA	NA	False	NA	NA	False	NA	NA	NA	85051931	85049165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85049200_85051900
ES.15866.83	chr17	-	2333	14	NNC	ENSMUSG00000024120.13	novel	2875	10	NA	NA	16	5250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.922560393256	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCATGCTCAGATGTTC	NA	False	NA	NA	False	AATATA	-18	NA	85097970	85068605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85069331_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.84	chr17	-	3495	13	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	-262	57596	-31	3585	5prime_fragment	FALSE	canonical	3	482	junction_9	33.9124690277124	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAAGTCAGTGTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	85098248	85070270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.85	chr17	-	2018	13	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	27	58784	27	2397	5prime_fragment	FALSE	canonical	3	482	junction_9	33.9124690277124	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGTTCATGATGCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	85097959	85071458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.86	chr17	-	2019	13	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	8	2388	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	151.876663228204	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTTTAACATGTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	85097978	85071467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078860_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.87	chr17	-	2738	10	ISM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	15107	60090	2092	1091	internal_fragment	FALSE	canonical	3	482	junction_8	30.5642411897657	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGGTTCATACATT	7360	False	NA	NA	False	TATAAA	-13	NA	85082879	85072764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816
ES.15866.88	chr17	-	5586	1	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	5544	14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGAATTGCCTTTTCTA	9133	False	NA	NA	False	NA	NA	NA	85079427	85073841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85073800_85079400
ES.15866.89	chr17	-	1707	6	NIC	ENSMUSG00000024120.13	novel	4012	9	NA	NA	4	-724	intron_retention	FALSE	canonical	3	482	junction_2	41.1310101991186	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATAGCTTGCGTCTG	NA	False	NA	NA	False	NA	NA	NA	85097982	85078588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.9	chr17	-	4430	38	NNC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	108.652796747492	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85098034	85012674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015580_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ES.15866.90	chr17	-	2850	4	NNC	ENSMUSG00000024120.13	novel	4012	9	NA	NA	1130	-766	intron_retention	TRUE	non_canonical	0	0	junction_3	242.598891634365	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	6398	False	NA	NA	False	NA	NA	NA	85083841	85078630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85080531_85080635_85080758_85082816_85083235_85083431
ES.15866.91	chr17	-	1525	2	ISM	ENSMUSG00000024120.13	ENSMUST00000161299.8	4012	9	-2	8221	-2	-5373	5prime_fragment	FALSE	canonical	3	583	junction_1	0	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTCTTTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	85097992	85083237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85084563_85097792
ES.15867.1	chr17	+	2123	2	Intergenic	novelGene_13216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGATCTCCGAATGTG	7604	False	NA	NA	False	NA	NA	NA	85098288	85102333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85098497_85100418
ES.15867.2	chr17	+	319	1	Intergenic	novelGene_13217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGGTTGAAGTTT	7606	False	NA	NA	False	AATAAA	-15	NA	85098290	85098609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85098300_85098600
ES.15868.1	chr17	+	270	1	Intergenic	novelGene_13218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTAATTCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	85136480	85136750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85136500_85136800
ES.15869.1	chr17	+	159	1	Intergenic	novelGene_13219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	85218647	85218806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85218600_85218800
ES.1587.1	chr1	+	4075	12	FSM	ENSMUSG00000032649.15	ENSMUST00000044311.9	4093	12	17	1	17	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.8227216050694	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGCCTGTGTTTCTGC	NA	False	NA	NA	False	AATAAA	-20	NA	152275597	152386445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152276149_152344199_152344311_152347438_152347557_152348845_152348981_152360588_152360794_152365530_152365651_152371552_152371630_152375655_152375763_152378708_152378842_152379828_152379957_152382543_152382751_152384262
ES.15870.1	chr17	+	1802	7	NNC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	596	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	777.447408010485	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTGGTTTTATTCC	NA	False	NA	10	True	AATAAA	-18	NA	85264764	85331418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265076_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
ES.15870.10	chr17	+	2514	6	NNC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	-8	-87	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_5	615.144535861288	1144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTACTCTCTCAGTTT	NA	False	NA	15	True	AATAAA	-25	NA	85265418	85322032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85321070
ES.15870.12	chr17	+	3027	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-10	306	0	-306	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTCTTGTAAGTTAC	NA	False	NA	NA	False	AATATA	-18	NA	85265426	85324319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.13	chr17	+	1782	6	NNC	ENSMUSG00000061130.14	novel	1290	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_5	712.711835176041	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTGGTTTTATTCC	NA	False	NA	10	True	AATAAA	-18	NA	85265429	85331418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85331123
ES.15870.14	chr17	+	2686	7	NIC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	3	-83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	708.663922854519	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTCTCTCAGTTTCCAC	NA	False	NA	19	True	AATAAA	-29	NA	85265429	85322036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85265823_85281447_85281550_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.17	chr17	+	2392	5	NIC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	3	-78	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	642.513180798651	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACGGTGTGACATATT	NA	False	NA	21	True	AATAAA	-10	NA	85265429	85324547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85265823_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.18	chr17	+	2698	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-7	632	3	-632	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTACTGGAGTT	NA	False	NA	NA	False	AGTAAA	-10	NA	85265429	85323993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.19	chr17	+	2274	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-7	1056	3	-1056	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTGCTTTGTCATCTT	NA	False	NA	NA	False	AATGAA	-18	NA	85265429	85323569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.2	chr17	+	3538	7	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	623	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	599.038674321895	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGGCATACTTGTGG	NA	False	NA	18	True	AATAAA	-30	NA	85264791	85324624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265076_85265504_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.21	chr17	+	3083	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	3	-416	3	416	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTAGCTGATTATTTA	NA	False	NA	NA	False	TTTAAA	-17	NA	85265429	85322535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.22	chr17	+	1882	7	NIC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	715.729639365778	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGGTTTTATTCCA	NA	False	NA	11	True	AATAAA	-19	NA	85265432	85331419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
ES.15870.23	chr17	+	3191	7	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	-4	-76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	599.038674321895	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTGTGACATATTAC	NA	False	NA	23	True	AATAAA	-12	NA	85265432	85324549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836_85323759_85323818
ES.15870.24	chr17	+	2685	3	NNC	ENSMUSG00000061130.14	novel	1320	5	NA	NA	-2	-6521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	725	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTTCGCAGTTTCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	85265434	85306626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85302758_85305979
ES.15870.25	chr17	+	2612	2	ISM	ENSMUSG00000061130.14	ENSMUST00000234710.2	1320	5	-369	9816	-2	-9816	5prime_fragment	FALSE	canonical	3	1450	junction_1	0	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCACCAGCTCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	85265434	85303331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_85265823_85301107
ES.15870.27	chr17	+	2535	6	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	3	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	649.515819668774	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTGACATATTACTCTT	NA	False	NA	27	True	AATAAA	-16	NA	85265439	85324553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301251_85310693_85310812_85312339_85312456_85312936_85312995_85322836
ES.15870.28	chr17	+	2522	6	NNC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	4	-80	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	587.897474054788	1144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTCAGTTTCCACTTA	NA	False	NA	22	True	AATAAA	-32	NA	85265440	85322039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.29	chr17	+	2633	6	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	4	-632	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	589.085596496808	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTACTGGAGTT	NA	False	NA	NA	False	AGTAAA	-10	NA	85265440	85323993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.3	chr17	+	3382	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	-60	1	-50	-1	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGGCATACTTGTGG	NA	False	NA	18	True	AATAAA	-30	NA	85265376	85324624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.30	chr17	+	1724	7	NIC	ENSMUSG00000061130.14	novel	1307	7	NA	NA	7	26	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	715.729639365778	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTCGAGCATTCCACCAG	NA	False	NA	43	True	AAGAAA	-12	NA	85265443	85331272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
ES.15870.31	chr17	+	2265	4	NNC	ENSMUSG00000061130.14	novel	1633	8	NA	NA	13	-6991	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACTCTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	85265449	85306156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85272442_85272500_85301107_85302766_85305979
ES.15870.33	chr17	+	3028	7	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	166	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	599.038674321895	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTGACATATTACTCTT	NA	False	NA	27	True	AATAAA	-16	NA	85265602	85324553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836_85323741_85323797
ES.15870.34	chr17	+	3320	5	NNC	ENSMUSG00000061130.14	novel	1320	5	NA	NA	648	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	682.776317691233	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTCTCTCAGTTTC	NA	False	NA	16	True	AATAAA	-26	NA	85301755	85322033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85314341_85320559
ES.15870.35	chr17	+	7151	5	NNC	ENSMUSG00000061130.14	novel	1591	6	NA	NA	3763	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	645.262107596595	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTCAGCTGTTT	NA	False	NA	12	True	AATAAA	-28	NA	85304870	85322125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85308625_85308716_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.36	chr17	+	6196	3	NIC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	6246	-86	intron_retention	FALSE	canonical	3	718	junction_2	446	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTACTCTCTCAGTTTC	NA	False	NA	16	True	AATAAA	-26	NA	85307353	85322033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85312452_85312936_85312995_85320993
ES.15870.37	chr17	+	1885	3	ISM	ENSMUSG00000061130.14	ENSMUST00000234851.2	1307	7	11230	6658	11230	-76	internal_fragment	FALSE	canonical	3	708	junction_2	451	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTGTGACATATTAC	NA	False	NA	23	True	AATAAA	-12	NA	85312337	85324549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_85312452_85312936_85312995_85322836
ES.15870.38	chr17	+	4314	1	NIC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	16615	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	1134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTCTCTCAGTTTCCAC	NA	False	NA	19	True	AATAAA	-29	NA	85317722	85322036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85317700_85322000
ES.15870.39	chr17	+	5425	1	NIC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	18015	-78	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACGGTGTGACATATT	NA	False	NA	21	True	AATAAA	-10	NA	85319122	85324547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85319100_85324500
ES.15870.4	chr17	+	2794	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	-34	-90	-34	90	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTTCTGCTGCTTT	NA	False	NA	96	True	ATTAAA	-32	NA	85265392	85322209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.40	chr17	+	3505	1	NIC	ENSMUSG00000061130.14	novel	1591	6	NA	NA	26807	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGGTTTTATTCCA	NA	False	NA	11	True	AATAAA	-19	NA	85327914	85331419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_85327900_85331400
ES.15870.5	chr17	+	2629	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	-33	74	-33	-74	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTCCACTTATTTCAC	NA	False	NA	28	True	AATAAA	-38	NA	85265393	85322045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ES.15870.6	chr17	+	3301	6	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	589.085596496808	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGCATACTTGTGGAA	NA	False	NA	20	True	AATAAA	-32	NA	85265405	85324626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85322836
ES.15870.7	chr17	+	1853	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-389	-174	-12	1	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGGTTTTATTCCAG	NA	False	NA	12	True	AATAAA	-20	NA	85265414	85331420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
ES.15870.9	chr17	+	5115	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	-10	-2435	-10	-71	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGACATATTACTCTTT	NA	False	NA	28	True	AATAAA	-17	NA	85265416	85324554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ES.15871.1	chr17	-	3523	2	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	85274980	85248519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85248535_85271472
ES.15871.2	chr17	-	129	1	Intergenic	novelGene_13220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	85262087	85261958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85262000_85262100
ES.15871.3	chr17	-	4561	2	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGCTTCATGATATTC	NA	False	NA	NA	False	NA	NA	NA	85274983	85270382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85270726_85270765
ES.15871.4	chr17	-	4559	2	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGCTTCATGATATTC	NA	False	NA	NA	False	NA	NA	NA	85274982	85270382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85270740_85270780
ES.15871.6	chr17	-	4567	1	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85274982	85270415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85270400_85275000
ES.15871.7	chr17	-	3568	1	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTCTATGATACAAT	NA	False	NA	NA	False	NA	NA	NA	85274984	85271416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85271400_85275000
ES.15872.1	chr17	-	3040	1	Intergenic	novelGene_13221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	85317240	85314200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85314200_85317200
ES.15873.1	chr17	-	5547	1	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATCAAAGC	NA	False	NA	NA	False	NA	NA	NA	85331863	85326316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85326300_85331900
ES.15874.1	chr17	-	2483	1	Antisense	novelGene_ENSMUSG00000024131.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	85337875	85335392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85335400_85337900
ES.15875.1	chr17	-	157	1	Intergenic	novelGene_13222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	85349441	85349284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85349300_85349400
ES.15876.1	chr17	-	5007	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-52	-2221	-35	1161	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTGAAAGTCTTTT	NA	False	NA	1	True	ATTAAA	-15	NA	85397704	85369736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15876.10	chr17	-	2228	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-31	1058	-11	1	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGTAATTTTGCT	NA	False	NA	-1	True	TTTAAA	-6	NA	85397680	85371955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ES.15876.11	chr17	-	2849	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-236	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	51.2963080980473	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397905	85371956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397672
ES.15876.12	chr17	-	2313	15	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	52.4877050715067	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397663	85371956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85397533
ES.15876.13	chr17	-	2411	16	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.216490399957	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397664	85371956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85396206_85396304_85397533
ES.15876.14	chr17	-	4042	14	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-78	0	-61	0	intron_retention	FALSE	canonical	3	148	junction_9	20.4317307466053	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTTGTGTAATTTTG	NA	False	NA	-3	True	TTTAAA	-4	NA	85397730	85371957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ES.15876.15	chr17	-	5478	12	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	4663	1	-1553	-1	intron_retention	FALSE	canonical	3	148	junction_9	18.3721852288356	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTTTGTGTAATTTT	NA	False	NA	-4	True	TTTAAA	-3	NA	85392989	85371958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399
ES.15876.16	chr17	-	5437	13	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	3549	2	-2667	-2	3prime_fragment	FALSE	canonical	3	148	junction_9	17.7615377212172	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTTTGTGTAATTT	NA	False	NA	-5	True	TTTAAA	-2	NA	85394103	85371959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620
ES.15876.17	chr17	-	2388	14	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	1560	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	54.2279868353327	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTCTTTGTGTA	NA	False	NA	-9	True	NA	NA	NA	85396089	85371963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395774
ES.15876.18	chr17	-	2129	14	NNC	ENSMUSG00000024127.16	novel	3255	14	NA	NA	-59	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	52.208843251019	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTCTTTGTGTA	NA	False	NA	-9	True	NA	NA	NA	85397728	85371963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397672
ES.15876.19	chr17	-	2379	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	17	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	52.7265278080577	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAAGTGAAGTTTTTTT	NA	False	NA	-50	True	NA	NA	NA	85397632	85372004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396016_85397533
ES.15876.2	chr17	-	6215	14	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-31	-2220	-14	1160	intron_retention	FALSE	canonical	3	148	junction_9	20.4317307466053	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTCTGAAAGTCTTT	NA	False	NA	0	True	ATTAAA	-14	NA	85397683	85369737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ES.15876.20	chr17	-	5280	14	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-3	-51	intron_retention	FALSE	canonical	3	148	junction_8	22.4240994621053	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAGCAAAAGTGAAGTTT	NA	False	NA	-54	True	NA	NA	NA	85397662	85372008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15876.21	chr17	-	2285	12	ISM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-23	1688	-6	-1688	5prime_fragment	FALSE	canonical	3	148	junction_6	22.3177652247733	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTCATCTGATGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	85397675	85373645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15876.22	chr17	-	1070	5	ISM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-10	14608	0	-19	5prime_fragment	FALSE	canonical	3	23	junction_4	71.3249605678124	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAAAGATCTATGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	85397659	85385505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ES.15876.23	chr17	-	2499	4	FSM	ENSMUSG00000024127.16	ENSMUST00000234393.2	1164	4	-863	-472	-863	-20	multi-exon	FALSE	canonical	3	185	junction_3	2.05480466765633	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGAAAGATCTATGCT	NA	False	NA	NA	False	AATAAA	-18	NA	85392299	85385506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620
ES.15876.24	chr17	-	1630	6	FSM	ENSMUSG00000024127.16	ENSMUST00000234036.2	1625	6	-25	20	-15	-20	multi-exon	FALSE	canonical	3	151	junction_4	17.1043854025802	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGAAAGATCTATGCT	NA	False	NA	NA	False	AATAAA	-18	NA	85397684	85385506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15876.3	chr17	-	4449	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-35	-1159	-15	1159	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCTGAAAGTCTT	NA	False	NA	-1	True	ATTAAA	-13	NA	85397684	85369738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ES.15876.4	chr17	-	4373	14	NNC	ENSMUSG00000024127.16	novel	3255	14	NA	NA	-5	1159	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	66.0724006690957	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCTGAAAGTCTT	NA	False	NA	-1	True	ATTAAA	-13	NA	85397674	85369738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379472_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ES.15876.5	chr17	-	4330	14	NNC	ENSMUSG00000024127.16	novel	3255	14	NA	NA	-35	1159	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	52.208843251019	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTTCTGAAAGTCTT	NA	False	NA	-1	True	ATTAAA	-13	NA	85397704	85369738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397672
ES.15876.6	chr17	-	4878	15	NNC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	-48	1158	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	51.2963080980473	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTTTCTGAAAGTCT	NA	False	NA	-2	True	ATTAAA	-12	NA	85397717	85369739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397672
ES.15876.7	chr17	-	3290	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-23	-12	-3	12	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTCTGCGAATCACTTC	NA	False	NA	-6	True	TATAAA	-39	NA	85397672	85370885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ES.15876.8	chr17	-	3816	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-32	-1050	-15	-10	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTACAAATTCCAATTTT	NA	False	NA	-28	True	TATAAA	-28	NA	85397684	85370907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15876.9	chr17	-	2847	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	-110	-3	-93	2	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGTAATTTTGCTT	NA	False	NA	0	True	TTTAAA	-7	NA	85397762	85371954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ES.15877.1	chr17	+	4545	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	-24	-36018	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGTCCATCTGTGATG	2203	False	NA	3	True	AATAAA	-39	NA	85398009	85437918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
ES.15878.1	chr17	-	177	1	Intergenic	novelGene_13223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85412060	85411883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85411900_85412100
ES.15879.1	chr17	-	178	1	Intergenic	novelGene_13224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	85414977	85414799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85414800_85415000
ES.1588.1	chr1	+	176	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	152509681	152509857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_152509700_152509900
ES.15880.1	chr17	+	129	1	Intergenic	novelGene_13225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACCTAGCATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	85453334	85453463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85453300_85453500
ES.15881.1	chr17	-	2578	1	Intergenic	novelGene_13226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACATAATCTCGTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	85457042	85454464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85454500_85457000
ES.15882.1	chr17	+	204	1	Intergenic	novelGene_13227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCATAGAATTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	85460176	85460380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85460200_85460400
ES.15883.1	chr17	+	2631	4	NNC	ENSMUSG00000071037.7	novel	2512	6	NA	NA	67697	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTTATCTGTCTT	1702	False	NA	NA	False	AATAAA	-32	NA	85467207	85473940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85467670_85468317_85468415_85469465_85469637_85472039
ES.15883.2	chr17	+	2544	4	NNC	ENSMUSG00000071037.7	novel	2512	6	NA	NA	67826	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGTGTTGTTATCTG	1831	False	NA	NA	False	AATAAA	-28	NA	85467336	85473936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_85467670_85468271_85468415_85469465_85469637_85472039
ES.15884.1	chr17	-	3204	5	Antisense	novelGene_ENSMUSG00000071037.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCGGTGTGTATCTGGT	NA	False	NA	NA	False	NA	NA	NA	85470156	85460835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_85461070_85461105_85463279_85463339_85463945_85466286_85466366_85470043
ES.15884.2	chr17	-	165	1	Intergenic	novelGene_13228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATACATACATACAT	NA	False	NA	NA	False	NA	NA	NA	85465501	85465336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85465300_85465500
ES.15884.3	chr17	-	178	1	Intergenic	novelGene_13229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTATTTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	85468051	85467873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85467900_85468100
ES.15884.4	chr17	-	162	1	Intergenic	novelGene_13230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	85469132	85468970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85469000_85469100
ES.15884.5	chr17	-	188	1	Intergenic	novelGene_13231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTTCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	85469338	85469150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85469200_85469300
ES.15885.1	chr17	-	155	1	Intergenic	novelGene_13232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85483956	85483801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85483800_85484000
ES.15886.1	chr17	+	2383	1	Intergenic	novelGene_13233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGATTACAGGGCTTAAT	NA	False	NA	NA	False	NA	NA	NA	85500457	85502840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85500500_85502800
ES.15887.1	chr17	-	179	1	Intergenic	novelGene_13234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	85655800	85655621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_85655600_85655800
ES.15888.1	chr17	-	4077	3	FSM	ENSMUSG00000093460.10	ENSMUST00000176375.8	1404	3	45	-2718	45	10	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAATCAGAATCTTTCTT	4943	False	NA	NA	False	AATAAA	-24	NA	85923629	85917910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_85921335_85922075_85922121_85923021
ES.15889.1	chr17	+	182	1	Intergenic	novelGene_13235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGGGAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	85943434	85943616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_85943400_85943600
ES.1589.1	chr1	+	2003	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	-91	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	649.932817040859	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGTAACTCTCCAGT	NA	False	NA	98	True	AATAAA	-33	NA	152642201	152651346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152642621_152644613_152644685_152647114_152647292_152650010
ES.1589.2	chr1	+	3903	3	FSM	ENSMUSG00000008475.14	ENSMUST00000143008.2	748	3	-1970	-1185	-13	-17	multi-exon	FALSE	canonical	3	1297	junction_2	75.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTTAATTGAATAC	NA	False	NA	83	True	AATAAA	-18	NA	152642279	152651331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152644685_152647114_152647292_152650010
ES.1589.3	chr1	+	828	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	2	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	649.932817040859	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCAGTGGGG	NA	False	NA	22	True	AAGAAA	-45	NA	152642294	152650264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152642621_152644613_152644685_152647114_152647292_152650010
ES.1589.6	chr1	+	1607	5	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	92	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	688.323461390065	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTTTCTTAATTGA	NA	False	NA	79	True	AATAAA	-14	NA	152642384	152651327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152642621_152644613_152644685_152647114_152647292_152650010_152650819_152651012
ES.1589.7	chr1	+	1641	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	93	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	682.593746105414	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTCTTAATTGAAT	NA	False	NA	81	True	AATAAA	-16	NA	152642385	152651329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152642621_152644613_152644685_152647114_152647181_152650060
ES.1589.8	chr1	+	1751	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	114	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	611.411663465968	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTTTTTCTTAATTG	NA	False	NA	78	True	AATAAA	-13	NA	152642406	152651326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152642621_152644613_152644685_152647141_152647292_152650010
ES.15890.1	chr17	-	239	1	Intergenic	novelGene_13236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGCTCCAGGTCCATC	NA	False	NA	NA	False	AAGAAA	-40	NA	86245894	86245655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86245700_86245900
ES.15891.1	chr17	+	5581	1	Antisense	novelGene_ENSMUSG00000024135.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTCAAGACCTATAGAT	2908	False	NA	NA	False	NA	NA	NA	86431721	86437302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_86431700_86437300
ES.15892.1	chr17	+	177	1	Intergenic	novelGene_13238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTATGTGAGA	727	False	NA	NA	False	NA	NA	NA	86439750	86439927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_86439800_86439900
ES.15893.1	chr17	-	2268	17	NNC	ENSMUSG00000024135.11	novel	809	7	NA	NA	38	34455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.103860556973	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCACAGAGGCCAGACT	NA	False	NA	NA	False	AATAAA	-20	NA	86452565	86257637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86257855_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.10	chr17	-	3422	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.5661034506029	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGTGTGCTGTTCA	NA	False	NA	-4	True	AATAAA	-12	NA	86452604	86292095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292753_86292858_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.11	chr17	-	3621	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	34.148335882403	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGTGTGCTGTTCA	NA	False	NA	-4	True	AATAAA	-12	NA	86452601	86292095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406042_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86451038_86451141_86452548
ES.15893.12	chr17	-	3383	20	NIC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.5829413910509	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGTGTGCTGTTCA	NA	False	NA	-4	True	AATAAA	-12	NA	86452617	86292095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.17	chr17	-	4169	20	NNC	ENSMUSG00000024135.11	novel	809	7	NA	NA	-3	-8358	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	22.0785552941789	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAATTGATCTCAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	86452606	86300732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86302373_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.18	chr17	-	2621	17	NIC	ENSMUSG00000024135.11	novel	809	7	NA	NA	20	7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	23.882197867868	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTGAAAGTTCTTCCT	NA	False	NA	NA	False	AATAAA	-36	NA	86452583	86355395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_86355948_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.19	chr17	-	5897	1	Intergenic	novelGene_13237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATGCAAACTTTATTG	NA	False	NA	NA	False	NA	NA	NA	86379377	86373480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86373500_86379400
ES.15893.2	chr17	-	3583	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	-52	-1	-52	1	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGCTGTTCATTGA	NA	False	NA	0	True	AATAAA	-16	NA	86452655	86292091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.3	chr17	-	3318	19	NIC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	31.8145183877882	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452617	86292092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.4	chr17	-	3436	20	NIC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	23.6656067285049	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452589	86292092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86452548
ES.15893.5	chr17	-	3575	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	28.8156231245209	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452606	86292092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292912_86295752_86295938_86304933_86304976_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.6	chr17	-	4487	20	NIC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	77	junction_8	11.2318798361512	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	False	NA	-2	True	AATAAA	-14	NA	86452604	86292093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_86292912_86295752_86295938_86307748_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.7	chr17	-	3438	23	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.1945492388969	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	False	NA	-2	True	AATAAA	-14	NA	86452576	86292093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292753_86292858_86292912_86295752_86295938_86304933_86304976_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.8	chr17	-	3634	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.5644114057545	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	False	NA	-2	True	AATAAA	-14	NA	86452607	86292093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86427581_86427683_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ES.15893.9	chr17	-	3600	22	NNC	ENSMUSG00000024135.11	novel	3530	21	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.0067628364393	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGGTGTGCTGTTCA	NA	False	NA	-4	True	AATAAA	-12	NA	86452574	86292095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86451038_86451141_86452548
ES.15894.1	chr17	-	2004	1	Intergenic	novelGene_13239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGAACTTTAGAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	86474896	86472892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86472900_86474900
ES.15895.1	chr17	-	5229	1	Intergenic	novelGene_13240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCCAACATCTATTCAA	NA	False	NA	NA	False	NA	NA	NA	86490733	86485504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86485500_86490700
ES.15896.1	chr17	+	5088	14	ISM	ENSMUSG00000045038.15	ENSMUST00000097275.9	6254	15	185779	1	-136998	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.5268794800984	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCTGTCCCAACAAGG	4296	False	NA	25	True	AATAAA	-20	NA	86660991	86965346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_86661047_86781744_86781905_86782942_86782978_86784233_86784320_86789547_86789678_86795587_86795731_86798178_86798276_86800648_86800849_86803365_86803540_86866578_86866734_86927319_86927459_86932752_86932942_86937488_86937636_86961968
ES.15897.1	chr17	-	164	1	Intergenic	novelGene_13241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATAAATCT	1565	False	NA	NA	False	NA	NA	NA	86709004	86708840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86708800_86709000
ES.15898.1	chr17	-	159	1	Intergenic	novelGene_13242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	86766315	86766156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_86766200_86766300
ES.15899.1	chr17	-	6253	1	FSM	ENSMUSG00000117568.2	ENSMUST00000234033.2	749	1	-1169	-4335	-1169	4335	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTTGTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	86994093	86987840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_86987800_86994100
ES.159.1	chr1	+	3272	15	FSM	ENSMUSG00000025776.14	ENSMUST00000095075.5	4472	15	292	908	292	-139	multi-exon	FALSE	canonical	0	0	junction_10	1.24539969815448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGGTAATGATTATAAT	NA	False	NA	NA	False	AATAAA	-21	NA	17797603	17835660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_17797988_17798817_17799139_17815577_17815697_17816003_17816137_17816954_17817071_17817724_17817826_17819730_17819872_17820488_17820550_17820657_17820725_17820957_17821089_17823061_17823106_17823191_17823265_17826481_17826558_17832335_17832467_17834286
ES.159.2	chr1	+	4165	15	FSM	ENSMUSG00000025776.14	ENSMUST00000095075.5	4472	15	317	-10	317	10	multi-exon	FALSE	canonical	0	0	junction_10	1.24539969815448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTCTATATTATTATA	NA	False	NA	NA	False	ATTAAA	-24	NA	17797628	17836578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_17797988_17798817_17799139_17815577_17815697_17816003_17816137_17816954_17817071_17817724_17817826_17819730_17819872_17820488_17820550_17820657_17820725_17820957_17821089_17823061_17823106_17823191_17823265_17826481_17826558_17832335_17832467_17834286
ES.159.3	chr1	+	2965	15	FSM	ENSMUSG00000025776.14	ENSMUST00000095075.5	4472	15	331	1176	331	-407	multi-exon	FALSE	canonical	0	0	junction_10	1.24539969815448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAGATTATTTTTACT	NA	False	NA	NA	False	ATTAAA	-12	NA	17797642	17835392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_17797988_17798817_17799139_17815577_17815697_17816003_17816137_17816954_17817071_17817724_17817826_17819730_17819872_17820488_17820550_17820657_17820725_17820957_17821089_17823061_17823106_17823191_17823265_17826481_17826558_17832335_17832467_17834286
ES.159.4	chr1	+	4531	1	NIC	ENSMUSG00000025776.14	novel	3117	15	NA	NA	18283	4008	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	17815594	17820125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_17815600_17820100
ES.1590.1	chr1	-	3992	18	FSM	ENSMUSG00000026482.14	ENSMUST00000027760.14	4572	18	0	580	0	-580	multi-exon	FALSE	canonical	2	3	junction_17	4.47368313925448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCAGATTGTAACAGGG	NA	False	NA	NA	False	AATAAA	-21	NA	152500968	152393281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152499568_152499680_152500734
ES.1590.2	chr1	-	3069	18	NNC	ENSMUSG00000026482.14	novel	3037	18	NA	NA	-101	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	5.35197147002083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCTCTTAGATCTGAG	NA	False	NA	NA	False	ATTAAA	-16	NA	152642203	152394572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152550610_152550778_152641657
ES.1590.3	chr1	-	3079	19	NNC	ENSMUSG00000026482.14	novel	5092	19	NA	NA	-3	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	5.05402907357518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGATGCTCTTAGATCT	NA	False	NA	NA	False	ATTAAA	-13	NA	152642105	152394575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152499568_152499680_152550610_152550778_152641657
ES.15900.1	chr17	+	5562	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-101	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTCGTGCCTCTTGT	NA	False	NA	9	True	ATTAAA	-14	NA	87061026	87140837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139004_87139057
ES.15900.10	chr17	+	5417	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCTCGTGCCTCTTG	NA	False	NA	8	True	ATTAAA	-13	NA	87061124	87140836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139086_87139185
ES.15900.11	chr17	+	5403	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061124	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139009_87139124
ES.15900.12	chr17	+	5415	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-3	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCTCGTGCCTCTTG	NA	False	NA	8	True	ATTAAA	-13	NA	87061124	87140836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139023_87139124
ES.15900.13	chr17	+	5405	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061125	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139022_87139134
ES.15900.14	chr17	+	5460	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061126	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139023_87139079
ES.15900.18	chr17	+	5067	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	404	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCCTGCTCGTGCCTCTT	NA	False	NA	7	True	ATTAAA	-12	NA	87061531	87140835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139016_87139057
ES.15900.2	chr17	+	5613	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-96	-1	-96	1	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCGTGCCTCTTGTTT	NA	False	NA	11	True	ATTAAA	-16	NA	87061031	87140839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ES.15900.20	chr17	+	5061	18	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	437	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.276577801552	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCTCGTGCCTCTTG	NA	False	NA	8	True	ATTAAA	-13	NA	87061564	87140836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87065677_87065718_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139003_87139058
ES.15900.21	chr17	+	10257	1	NIC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	34975	-26691	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATGTAGATAAGGGG	NA	False	NA	NA	False	NA	NA	NA	87096102	87106359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87096100_87106400
ES.15900.22	chr17	+	4852	16	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-27219	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	26.5073574692009	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTCGTGCCTCTTGT	NA	False	NA	9	True	ATTAAA	-14	NA	87104541	87140837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139003_87139058
ES.15900.23	chr17	+	4565	13	ISM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	52054	2	-18579	-2	3prime_fragment	FALSE	canonical	3	81	junction_1	11.0151410945722	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCTCGTGCCTCTTG	5488	False	NA	8	True	ATTAAA	-13	NA	87113181	87140836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ES.15900.25	chr17	+	4062	10	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-725	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.4183244478618	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTCGTGCCTCTTGT	NA	False	NA	9	True	ATTAAA	-14	NA	87131035	87140837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139003_87139058
ES.15900.26	chr17	+	3779	7	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	1318	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	36.3123027820232	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCTCGTGCCTCTTGT	NA	False	NA	9	True	ATTAAA	-14	NA	87133078	87140837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136912_87138378_87139208_87139249
ES.15900.27	chr17	+	3440	8	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	1321	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.6955153559348	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87133081	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139080_87139249
ES.15900.4	chr17	+	5560	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061041	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87139208_87139249
ES.15900.5	chr17	+	5511	17	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	25.7706228097033	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061066	87140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378_87138992_87139057
ES.15900.6	chr17	+	3533	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	-50	2033	-50	-2033	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTGAATTACTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	87061077	87138805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ES.15900.9	chr17	+	3434	6	NNC	ENSMUSG00000024140.11	novel	5516	16	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	44.6882534901511	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCTCGTGCCTCTTG	NA	False	NA	8	True	ATTAAA	-13	NA	87061123	87140836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87061737_87104543_87104685_87136426_87136529_87136737_87136912_87138378_87139004_87139057
ES.15901.1	chr17	+	3224	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	-136	1063	-136	-1063	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAGATTTGATGGC	NA	False	NA	NA	False	AGTAAA	-21	NA	87270373	87306434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ES.15901.10	chr17	+	178	1	Intergenic	novelGene_13243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAACTAGCCA	NA	False	NA	NA	False	NA	NA	NA	87300394	87300572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87300400_87300600
ES.15901.11	chr17	+	3792	3	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	31106	5	-407	-5	3prime_fragment	FALSE	canonical	3	30	junction_2	2	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTCTTACCTCAGGA	NA	False	NA	25	True	AATAAA	-35	NA	87301615	87307492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87302152_87302431_87302528_87304332
ES.15901.2	chr17	+	3478	6	NNC	ENSMUSG00000024143.16	novel	4151	5	NA	NA	-43	-171	intron_retention	FALSE	canonical	0	0	junction_5	14.0057131200093	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACACTGCTTCCGTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	87270466	87307326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332_87306695_87307239
ES.15901.3	chr17	+	4162	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTCAGGAGTTTT	NA	False	NA	30	True	AATAAA	-40	NA	87270498	87307497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ES.15901.4	chr17	+	5834	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	18	-1701	18	1701	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	87270527	87309198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ES.15901.5	chr17	+	3481	6	NNC	ENSMUSG00000024143.16	novel	4151	5	NA	NA	-37	-107	intron_retention	FALSE	non_canonical	0	0	junction_5	14.0057131200093	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTGTTGTTTTTAAATG	NA	False	NA	-77	True	ATTAAA	-11	NA	87270682	87307390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332_87305336_87305725
ES.15901.6	chr17	+	5754	4	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	194	8	-16	-8	intron_retention	FALSE	canonical	3	32	junction_1	3.39934634239519	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGACTTCTTACCTCA	NA	False	NA	22	True	AATAAA	-32	NA	87270703	87307489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431
ES.15901.7	chr17	+	1630	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	223	2298	13	343	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTAGATTTTAGTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	87270732	87305199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ES.15901.9	chr17	+	3544	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	438	169	228	-169	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACTGCTTCCGTTTGAT	NA	False	NA	NA	False	TATAAA	-17	NA	87270947	87307328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ES.15902.1	chr17	-	5872	2	Antisense	novelGene_ENSMUSG00000024143.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCTATTTGGTATCAA	NA	False	NA	NA	False	NA	NA	NA	87290698	87284264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_87288097_87288658
ES.15903.1	chr17	-	1007	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	1	-20	1	20	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCCGCTTAGACCTTTC	NA	False	NA	8	True	AATAAA	-35	NA	87332833	87304663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ES.15903.3	chr17	-	2062	5	ISM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	309	1	309	-1	3prime_fragment	FALSE	canonical	3	302	junction_2	26.5741886047345	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGCTTCAGATGCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	87332525	87304684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092
ES.15903.4	chr17	-	837	5	NIC	ENSMUSG00000024145.7	novel	988	6	NA	NA	41	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	138.539705499904	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGCTTCAGATGCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	87332793	87304684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87304996_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ES.15903.5	chr17	-	937	6	NNC	ENSMUSG00000024145.7	novel	988	6	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	135.598525065725	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGCTTCAGATGCTG	NA	False	NA	-14	True	AATAAA	-13	NA	87332792	87304685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87304996_87316230_87316340_87327828_87327946_87329293_87329379_87331092_87331342_87332725
ES.15903.6	chr17	-	894	6	NNC	ENSMUSG00000024145.7	novel	988	6	NA	NA	86	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.12173574779	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGGCTTCAGATGCT	NA	False	NA	-15	True	AATAAA	-12	NA	87332748	87304686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87304998_87316237_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ES.15903.7	chr17	-	2373	1	NIC	ENSMUSG00000024145.7	novel	988	6	NA	NA	25775	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGGCTTCAGATGCT	NA	False	NA	-15	True	AATAAA	-12	NA	87307059	87304686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87304700_87307100
ES.15903.8	chr17	-	750	6	NNC	ENSMUSG00000024145.7	novel	988	6	NA	NA	38	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.644745362086	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTATAGTAGATTGT	NA	False	NA	-28	True	NA	NA	NA	87332796	87304699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331276_87331342_87332725
ES.15903.9	chr17	-	1959	4	ISM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	38	21715	38	-21715	5prime_fragment	FALSE	canonical	3	301	junction_3	30.6920185064456	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTTGAAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	87332796	87326398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87327946_87329286_87329379_87331092_87331342_87332725
ES.15904.1	chr17	+	826	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	-34	392	-34	-54	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTGACATCCAGACCT	NA	False	NA	61	True	NA	NA	NA	87332943	87342846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ES.15904.2	chr17	+	1204	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	-6	-14	-6	14	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGTCACTGTAGACTG	NA	False	NA	18	True	AATAAA	-28	NA	87332971	87343252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ES.15904.3	chr17	+	671	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	495	18	-157	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTACGCACTGTCTA	NA	False	NA	26	True	AATGAA	-14	NA	87332995	87342743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ES.15904.4	chr17	+	915	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	18	251	18	87	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGACAAGTTGCATAT	NA	False	NA	NA	False	TATAAA	-41	NA	87332995	87342987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ES.15904.5	chr17	+	4402	4	NIC	ENSMUSG00000024146.10	novel	1184	5	NA	NA	25	0	intron_retention	FALSE	canonical	3	592	junction_3	40.4062701404951	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87333002	87343238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87333104_87335126_87338491_87341683_87341788_87342405
ES.15904.6	chr17	+	1309	6	NNC	ENSMUSG00000024146.10	novel	1184	5	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	304.446776957812	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTTGTGTCTTCAATG	NA	False	NA	2	True	AATAAA	-12	NA	87333008	87343236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87333104_87335126_87335193_87338435_87338491_87338987_87339146_87341683_87341788_87342405
ES.15904.7	chr17	+	3941	5	NNC	ENSMUSG00000024146.10	novel	1184	5	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	275.900684123835	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGTTGTGTCTTCAAT	NA	False	NA	1	True	AATAAA	-11	NA	87333010	87343235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87333104_87335126_87335193_87338435_87341205_87341604_87341788_87342405
ES.15905.1	chr17	+	4476	1	Intergenic	novelGene_13244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGAATAAACTAGAAGG	NA	False	NA	NA	False	NA	NA	NA	87373698	87378174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87373700_87378200
ES.15906.1	chr17	+	4017	2	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-418	-421	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTATAGAAAATATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	87414688	87444846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87414909_87441049
ES.15906.10	chr17	+	3007	1	NIC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	25762	-1213	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCCGTTTTATACA	NA	False	NA	5	True	AATAAA	-19	NA	87441047	87444054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87441000_87444100
ES.15906.2	chr17	+	3529	4	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-373	-1213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCCGTTTTATACA	NA	False	NA	5	True	AATAAA	-19	NA	87414733	87444054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87414909_87428489_87428647_87428807_87429000_87441049
ES.15906.3	chr17	+	3228	2	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-368	-1211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	7	True	AATAAA	-21	NA	87414738	87444056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87414960_87441049
ES.15906.4	chr17	+	3559	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-195	-2386	-183	-1211	multi-exon	FALSE	canonical	3	48	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	7	True	AATAAA	-21	NA	87414923	87444056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87415476_87441049
ES.15906.5	chr17	+	3704	4	NNC	ENSMUSG00000037104.10	novel	2019	4	NA	NA	-114	-1212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGCCGTTTTATACAT	NA	False	NA	6	True	AATAAA	-20	NA	87414992	87444055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87415476_87428178_87428237_87428489_87428647_87441049
ES.15906.6	chr17	+	4586	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-125	-3483	-113	-114	multi-exon	FALSE	canonical	3	48	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGTGGCACATTTTATT	NA	False	NA	NA	False	ACTAAA	-18	NA	87414993	87445153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87415476_87441049
ES.15906.7	chr17	+	4760	3	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-90	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTGCAGCGAAGTCTT	NA	False	NA	NA	False	TTTAAA	-18	NA	87415016	87445065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87415476_87428489_87428775_87441049
ES.15906.8	chr17	+	3499	3	NNC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	-66	-1212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGCCGTTTTATACAT	NA	False	NA	6	True	AATAAA	-20	NA	87415040	87444055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87415476_87428178_87428237_87441049
ES.15906.9	chr17	+	5983	1	Genic_Genomic	ENSMUSG00000037104.10	novel	NA	NA	NA	NA	-65	-9394	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87415041	87421024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_87415000_87421000
ES.15907.1	chr17	-	2592	5	NNC	ENSMUSG00000117384.2	novel	1396	4	NA	NA	2045	63442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAATTCCAGTACTAC	NA	False	NA	NA	False	AATAAA	-19	NA	87500325	87436201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87438016_87439456_87439584_87468559_87468746_87499767_87499956_87500048
ES.15907.2	chr17	-	1866	1	Intergenic	novelGene_13245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTTTTTATCAGGATA	8528	False	NA	NA	False	NA	NA	NA	87465273	87463407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87463400_87465300
ES.15907.3	chr17	-	585	2	ISM	ENSMUSG00000117384.2	ENSMUST00000234580.2	1396	4	2026	23	2026	-23	3prime_fragment	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATAAGCCTATATCA	NA	False	NA	NA	False	NA	NA	NA	87500344	87499666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87499956_87500048
ES.15908.1	chr17	+	178	1	Intergenic	novelGene_13246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTGCCAT	NA	False	NA	NA	False	NA	NA	NA	87550091	87550269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87550100_87550300
ES.15909.1	chr17	-	8868	4	ISM	ENSMUSG00000024150.13	ENSMUST00000129616.8	813	5	-15	-1130	0	0	intron_retention	FALSE	canonical	3	66	junction_3	116.178980695974	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573323	87562085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177
ES.15909.10	chr17	-	2198	7	NNC	ENSMUSG00000024150.13	novel	813	5	NA	NA	41	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	140.517693626896	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAAGCAGCTGTTGA	NA	False	NA	-11	True	AATAAA	-8	NA	87573250	87562094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87569779_87569877_87571568_87571794_87573219
ES.15909.2	chr17	-	2046	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	-31	2	0	-2	multi-exon	FALSE	canonical	3	15	junction_4	147.031246679065	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTGACGTTGAC	NA	False	NA	-4	True	AATAAA	-15	NA	87573363	87562087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
ES.15909.3	chr17	-	1826	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	-5	217	-5	-2	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTGACGTTGAC	NA	False	NA	-4	True	AATAAA	-15	NA	87573368	87562087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ES.15909.5	chr17	-	1783	4	NNC	ENSMUSG00000024150.13	novel	2038	4	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.196769288218	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTGACGTTGAC	NA	False	NA	-4	True	AATAAA	-15	NA	87573373	87562087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87573310
ES.15909.6	chr17	-	2887	3	FSM	ENSMUSG00000024150.13	ENSMUST00000145895.8	751	3	-40	-2096	-10	-4	multi-exon	FALSE	canonical	3	165	junction_2	67	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGCTGTTGACGTTG	NA	False	NA	-6	True	AATAAA	-13	NA	87573342	87562089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87564735_87565355_87565518_87573262
ES.15909.7	chr17	-	1919	5	NNC	ENSMUSG00000024150.13	novel	2017	5	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	154.273296457942	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGCTGTTGACGT	NA	False	NA	-8	True	AATAAA	-11	NA	87573346	87562091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87569779_87569899_87573262
ES.15909.8	chr17	-	1946	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	-40	-1303	0	-9	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAAGCAGCTGTTGA	NA	False	NA	-11	True	AATAAA	-8	NA	87573363	87562094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
ES.15909.9	chr17	-	2086	7	NNC	ENSMUSG00000024150.13	novel	603	5	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	140.65412661324	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAAGCAGCTGTTGA	NA	False	NA	-11	True	AATAAA	-8	NA	87573328	87562094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87570351_87570431_87571421_87571518_87573262
ES.1591.1	chr1	-	5694	1	Antisense	novelGene_ENSMUSG00000008475.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAACAAACAAAGAATAA	NA	False	NA	NA	False	CATAAA	-38	NA	152649402	152643708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_152643700_152649400
ES.15910.1	chr17	+	4646	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	-31	-1	-31	1	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGTCCAGTTACTTG	NA	False	NA	14	True	AATAAA	-29	NA	87590282	87689198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.10	chr17	+	917	1	FSM	ENSMUSG00000036918.17	ENSMUST00000234468.2	868	1	-54	5	1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGACTTAGACCGATG	NA	False	NA	NA	False	AATAAA	-21	NA	87590321	87591238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87590300_87591200
ES.15910.11	chr17	+	5215	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	9	-610	2	610	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTTTTTCAAAAA	NA	False	NA	NA	False	AATATA	-15	NA	87590322	87689807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.14	chr17	+	2820	18	ISM	ENSMUSG00000036918.17	ENSMUST00000125875.8	3917	19	-2	7967	-2	2016	5prime_fragment	FALSE	canonical	3	58	junction_15	8.54218111090416	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCTCCCCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	87590330	87671365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883
ES.15910.15	chr17	+	4655	21	NIC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	21.8755571357623	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590330	87689197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601436_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.16	chr17	+	4769	22	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.1333576287545	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGAGTGTCCAGTTAC	NA	False	NA	11	True	AATAAA	-26	NA	87590331	87689195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601436_87601495_87602443_87602561_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.17	chr17	+	4500	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.0136372614152	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGTCTGAAGAGTG	NA	False	NA	2	True	AATAAA	-17	NA	87590343	87689186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590370_87590472_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648285_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.19	chr17	+	3011	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	38	1565	19	118	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGCTTCCATGCCACT	NA	False	NA	NA	False	AATAGA	-17	NA	87590351	87687632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.2	chr17	+	4525	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.6818409675011	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590299	87689197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590370_87590472_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.20	chr17	+	5571	15	ISM	ENSMUSG00000036918.17	ENSMUST00000125875.8	3917	19	22	21734	-21	10221	5prime_fragment	FALSE	canonical	3	61	junction_13	7.89083684550941	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGACTCTTCTGCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	87590354	87657598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968
ES.15910.21	chr17	+	4254	17	NIC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-12	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.6878135425202	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTCTGAAGAGTGTC	NA	False	NA	4	True	AATAAA	-19	NA	87590363	87689188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.22	chr17	+	2638	16	NNC	ENSMUSG00000036918.17	novel	2209	17	NA	NA	-2	10221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	19.9381265140155	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGACTCTTCTGCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	87590373	87657598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87657043
ES.15910.23	chr17	+	3890	1	Intergenic	novelGene_13247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87622598	87626488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87622600_87626500
ES.15910.24	chr17	+	3460	14	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-2150	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.9630472528563	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCAGTTACTTGATG	NA	False	NA	17	True	AATAAA	-32	NA	87635491	87689201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87635503_87635546_87635784_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.25	chr17	+	3551	11	ISM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	46651	7	-677	-7	3prime_fragment	FALSE	canonical	3	58	junction_6	7.50732975164938	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCTGAAGAGTGTCCA	241	False	NA	6	True	AATAAA	-21	NA	87636964	87689190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.26	chr17	+	4618	10	ISM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	49740	9	2412	-9	3prime_fragment	FALSE	canonical	3	58	junction_5	7.05533682950557	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTCTGAAGAGTGTC	168	False	NA	4	True	AATAAA	-19	NA	87640053	87689188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.27	chr17	+	2873	9	ISM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	57004	9	9676	-9	3prime_fragment	FALSE	canonical	3	58	junction_4	7.09643396361863	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTCTGAAGAGTGTC	1010	False	NA	4	True	AATAAA	-19	NA	87647317	87689188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.28	chr17	+	2513	6	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-21019	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.3238415473608	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGAGTGTCCAGTTAC	NA	False	NA	11	True	AATAAA	-26	NA	87665261	87689195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87665306_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.29	chr17	+	2514	5	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-17298	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.45135132232	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87668982	87689197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87669143_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.3	chr17	+	4307	17	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-12	-11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	24.6379249075485	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGTCTGAAGAGTG	NA	False	NA	2	True	AATAAA	-17	NA	87590301	87689186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670890_87671019_87677886_87678090_87687276
ES.15910.30	chr17	+	2963	4	ISM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	78962	-608	-17005	608	3prime_fragment	FALSE	canonical	3	67	junction_1	5.90668171555645	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTTTTTTTTTTCAAA	NA	False	NA	NA	False	AATATA	-13	NA	87669275	87689805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.31	chr17	+	2237	3	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-13275	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTCTGAAGAGTGTC	454	False	NA	4	True	AATAAA	-19	NA	87673005	87689188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87673128_87677886_87678090_87687276
ES.15910.32	chr17	+	2164	3	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-9436	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGTCCAGTTACTTGA	3509	False	NA	15	True	AATAAA	-30	NA	87676844	87689199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87676883_87677886_87678090_87687276
ES.15910.4	chr17	+	5130	19	NIC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-11	610	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	18.3461234846378	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTTTTTCAAAAA	NA	False	NA	NA	False	AATATA	-15	NA	87590302	87689807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.5	chr17	+	4600	20	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.0755570252442	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590303	87689197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641776_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.6	chr17	+	5352	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	-7	608	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	20.231164079212	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTTTTTTTTTTCAAA	NA	False	NA	NA	False	AATATA	-13	NA	87590306	87689805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601371_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.7	chr17	+	4448	19	NIC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	18.0069431053691	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGAGTGTCCAGTTAC	NA	False	NA	11	True	AATAAA	-26	NA	87590313	87689195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87590839_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15910.8	chr17	+	4509	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	17.6818409675011	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGACTGTCTGAAGAGT	NA	False	NA	1	True	AATAAA	-16	NA	87590313	87689185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276_87687793_87687885
ES.15910.9	chr17	+	4737	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	20.231164079212	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590313	87689197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601371_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ES.15911.1	chr17	-	714	1	Genic_Genomic	ENSMUSG00000089755.2	novel	NA	NA	NA	NA	1513	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGCTTCCAGATGAGTC	NA	False	NA	NA	False	NA	NA	NA	87670377	87669663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_87669700_87670400
ES.15912.1	chr17	+	175	1	Intergenic	novelGene_13248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	87728568	87728743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87728600_87728700
ES.15913.1	chr17	-	175	1	Intergenic	novelGene_13249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAACTCAGGAC	NA	False	NA	NA	False	NA	NA	NA	87732432	87732257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87732300_87732400
ES.15914.1	chr17	-	1201	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	8	-4	8	4	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGAATCTGAGTGATT	NA	False	NA	-1	True	AATAAA	-25	NA	87754355	87740835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.10	chr17	-	2155	5	FSM	ENSMUSG00000036438.15	ENSMUST00000150137.2	657	5	-18	-1480	-11	-2	multi-exon	FALSE	canonical	3	7049	junction_1	180.22954114129	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754295	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.11	chr17	-	1118	5	NNC	ENSMUSG00000036438.15	novel	842	5	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3032.59397010216	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTTGCTCTGAATCT	NA	False	NA	-9	True	AATAAA	-17	NA	87754289	87740843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743369_87754204
ES.15914.12	chr17	-	2401	1	NIC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	11032	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTTGCTCTGAATCT	NA	False	NA	-9	True	AATAAA	-17	NA	87743244	87740843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87740800_87743200
ES.15914.13	chr17	-	5275	4	ISM	ENSMUSG00000036438.15	ENSMUST00000143965.8	890	5	-15	-304	-7	-4	intron_retention	FALSE	canonical	3	6557	junction_1	292.136954184163	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTTGCTCTGAATCT	NA	False	NA	-9	True	AATAAA	-17	NA	87754291	87740843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87741484_87742503_87742640_87743031_87743363_87750123
ES.15914.14	chr17	-	1119	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2867.14627460826	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATTGTTGCTCTGAAT	NA	False	NA	-11	True	AATAAA	-15	NA	87754289	87740845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743357_87750123_87750155_87754220
ES.15914.15	chr17	-	6302	3	NIC	ENSMUSG00000036438.15	novel	890	5	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	7049	junction_1	102	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAATTGTTGCTCTGA	NA	False	NA	-13	True	AATAAA	-13	NA	87754302	87740847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87742640_87743031_87743363_87750123
ES.15914.16	chr17	-	1117	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-5	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2830.42340295582	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87754289	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750167_87754220
ES.15914.18	chr17	-	3480	4	NNC	ENSMUSG00000036438.15	novel	890	5	NA	NA	8466	-26	intron_retention	FALSE	non_canonical	0	0	junction_3	3213.24885781077	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87745810	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87745544_87745596
ES.15914.19	chr17	-	1096	5	NNC	ENSMUSG00000036438.15	novel	842	5	NA	NA	-5	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3032.59397010216	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87754289	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754198
ES.15914.2	chr17	-	1211	5	FSM	ENSMUSG00000036438.15	ENSMUST00000143965.8	890	5	-15	-306	-7	-2	multi-exon	FALSE	canonical	3	6557	junction_1	362.950668135492	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754291	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87741484_87742503_87742640_87743031_87743363_87750123_87750155_87754220
ES.15914.20	chr17	-	1089	5	NNC	ENSMUSG00000036438.15	novel	842	5	NA	NA	-5	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3032.59397010216	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87754289	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743374_87754216
ES.15914.22	chr17	-	450	2	NNC	ENSMUSG00000036438.15	novel	842	5	NA	NA	-12	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87754296	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741236_87754216
ES.15914.23	chr17	-	8036	4	ISM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	3970	26	3883	-26	intron_retention	FALSE	canonical	3	6557	junction_1	315.455226617027	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87750393	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218
ES.15914.24	chr17	-	1154	4	NIC	ENSMUSG00000036438.15	novel	890	5	NA	NA	-5	-26	intron_retention	FALSE	canonical	3	65	junction_3	3182.66806311937	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	False	NA	-31	True	NA	NA	NA	87754289	87740865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87741484_87742503_87742640_87743031_87743363_87754220
ES.15914.25	chr17	-	1094	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-5	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2859.78534858825	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCCAATAAAAAAAATTAC	NA	False	NA	-36	True	NA	NA	NA	87754289	87740870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742503_87742640_87743031_87743133_87743218_87743363_87750123_87750155_87754220
ES.15914.26	chr17	-	916	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	72	217	-7	36	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTGCACTATTGCAAAA	NA	False	NA	-99	True	NA	NA	NA	87754291	87741056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.27	chr17	-	726	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	67	412	-12	-104	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTTGCATGTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	87754296	87741251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.28	chr17	-	184	1	NIC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-6	-11053	mono-exon	FALSE	NA	NA	NA	NA	NA	1136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87754290	87754106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87754100_87754300
ES.15914.3	chr17	-	3904	3	NNC	ENSMUSG00000036438.15	novel	890	5	NA	NA	9059	-2	intron_retention	TRUE	canonical	2	6	junction_2	3521.5	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87745217	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87742640_87743031_87745083_87745162
ES.15914.4	chr17	-	1118	6	NNC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	172	junction_1	2853.25740864718	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754291	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87741484_87742516_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.5	chr17	-	1527	5	NIC	ENSMUSG00000036438.15	novel	1205	6	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	6557	junction_1	371.588734355605	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754295	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_87741484_87742503_87743139_87743218_87743363_87750123_87750155_87754220
ES.15914.6	chr17	-	5250	5	ISM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	19	2	19	-2	intron_retention	FALSE	canonical	3	6557	junction_1	298.537686063251	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754344	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123
ES.15914.7	chr17	-	4600	3	NNC	ENSMUSG00000036438.15	novel	403	4	NA	NA	8619	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	3659.5	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87745657	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_87743139_87743218_87745017_87745152
ES.15914.8	chr17	-	1104	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	-11	-251	-11	-2	multi-exon	FALSE	canonical	3	65	junction_4	3004.56365384393	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCTCTGAATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	87754295	87740841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
ES.15915.1	chr17	-	170	1	Intergenic	novelGene_13250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTGCAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	87775906	87775736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87775700_87775900
ES.15916.1	chr17	-	654	1	Intergenic	novelGene_13251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTTCTTATTTTAT	NA	False	NA	NA	False	TTTAAA	-15	NA	87823519	87822865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87822900_87823500
ES.15917.1	chr17	-	202	1	Intergenic	novelGene_13252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCCTTGATCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	87890917	87890715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87890700_87890900
ES.15918.1	chr17	-	1767	3	Intergenic	novelGene_13253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTCTCAGTCGAGCTC	NA	False	NA	NA	False	CATAAA	-16	NA	87920953	87916867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87918513_87919863_87919926_87920893
ES.15919.1	chr17	+	1640	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	-115	220	-115	-197	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGTTTGAATCAAAT	NA	False	NA	32	True	AATAAA	-40	NA	87943994	87958337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
ES.15919.2	chr17	+	1523	9	NNC	ENSMUSG00000045394.10	novel	1745	9	NA	NA	-12	-209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.8378732617118	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGTTTCTAAGTTTG	NA	False	NA	20	True	AATAAA	-28	NA	87944097	87958325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951076_87953570_87953769_87957041_87957087_87957855
ES.15919.3	chr17	+	1701	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	21	23	21	0	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAAAATCAAACT	NA	False	NA	NA	False	NA	NA	NA	87944130	87958534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
ES.15919.4	chr17	+	1217	7	ISM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	3587	226	3587	-203	3prime_fragment	FALSE	canonical	3	196	junction_2	17.7200451466693	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTAAGTTTGTTTGAA	NA	False	NA	26	True	AATAAA	-34	NA	87947696	87958331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
ES.15919.5	chr17	+	891	5	ISM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	5414	232	5414	-209	3prime_fragment	FALSE	canonical	3	227	junction_1	7.71362431027076	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGTTTCTAAGTTTG	NA	False	NA	20	True	AATAAA	-28	NA	87949523	87958325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
ES.1592.1	chr1	+	174	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAGGTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	152661334	152661508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_152661300_152661500
ES.15920.1	chr17	-	1741	1	Intergenic	novelGene_13254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTAGCCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	87956655	87954914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87954900_87956700
ES.15920.2	chr17	-	909	1	Intergenic	novelGene_13255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACAGGCCTTGGGGGCTA	NA	False	NA	NA	False	NA	NA	NA	87956657	87955748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87955700_87956700
ES.15921.1	chr17	+	215	1	Intergenic	novelGene_13256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATCCCAGCACTTGGA	NA	False	NA	NA	False	NA	NA	NA	87961026	87961241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87961000_87961200
ES.15922.1	chr17	+	176	1	Intergenic	novelGene_13257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAATAGC	NA	False	NA	NA	False	NA	NA	NA	87961398	87961574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_87961400_87961600
ES.15923.1	chr17	+	3294	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	6	-17	6	17	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTTTTCTAAGAAAATA	4667	False	NA	36	True	AATAAA	-33	NA	87979763	88031158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.11	chr17	+	6959	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	6	junction_1	490.263798088311	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4855	False	NA	18	True	AATAAA	-15	NA	87979951	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.15	chr17	+	4433	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-11	2	intron_retention	FALSE	canonical	3	1624	junction_8	122.239644192238	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGTACCTTGTATTTC	4860	False	NA	21	True	AATAAA	-18	NA	87979956	88031143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88028487_88030758
ES.15923.16	chr17	+	5658	12	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-11	0	intron_retention	FALSE	canonical	1	6	junction_1	511.469960663534	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4860	False	NA	19	True	AATAAA	-16	NA	87979956	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88028487_88030758
ES.15923.18	chr17	+	1550	8	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	-30	12705	-9	0	5prime_fragment	FALSE	canonical	3	1629	junction_6	24.7732574707947	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTGTATTTTTTTG	4862	False	NA	NA	False	ATTAAA	-16	NA	87979958	88004131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922
ES.15923.19	chr17	+	5810	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1624	junction_8	118.435519259309	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4863	False	NA	19	True	AATAAA	-16	NA	87979959	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88028487_88030758
ES.15923.2	chr17	+	4546	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	1624	junction_7	133.771984651313	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4834	False	NA	18	True	AATAAA	-15	NA	87979930	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.20	chr17	+	2961	15	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	475.333073341467	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4863	False	NA	18	True	AATAAA	-15	NA	87979959	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990137_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.21	chr17	+	1996	4	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	-29	25591	-8	-1749	5prime_fragment	FALSE	canonical	3	1646	junction_2	25.7725090401036	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTCATTTATTTA	4863	False	NA	NA	False	AATAAA	-23	NA	87979959	87991245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958
ES.15923.23	chr17	+	4024	12	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	526.115281336893	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4868	False	NA	19	True	AATAAA	-16	NA	87979964	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026964_88028310_88028487_88030758
ES.15923.24	chr17	+	4794	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	30	junction_7	486.668457473874	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4868	False	NA	18	True	AATAAA	-15	NA	87979964	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88028487_88030758
ES.15923.27	chr17	+	3076	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	458.171418673065	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATTGGGGGTACCTTG	4873	False	NA	15	True	AATAAA	-12	NA	87979969	88031137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014743_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.28	chr17	+	4900	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	1624	junction_8	114.104903462046	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4873	False	NA	19	True	AATAAA	-16	NA	87979969	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88028487_88030758
ES.15923.29	chr17	+	4788	13	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	3	-3	intron_retention	TRUE	canonical	0	0	junction_3	659.911589196277	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTGGGGGTACCTTGT	4874	False	NA	16	True	AATAAA	-13	NA	87979970	88031138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989932_87990106_87992864_87993015_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88028487_88030758
ES.15923.31	chr17	+	2934	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_5	472.583541907283	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4876	False	NA	19	True	AATAAA	-16	NA	87979972	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.32	chr17	+	2861	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	1	28	junction_12	460.484643764433	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4877	False	NA	18	True	AATAAA	-15	NA	87979973	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026715_88026964_88028310_88028487_88030758
ES.15923.33	chr17	+	3091	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	459.18855967166	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4878	False	NA	18	True	AATAAA	-15	NA	87979974	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989932_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.34	chr17	+	4059	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	458.956449156368	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTGGGGGTACCTTGT	4878	False	NA	16	True	AATAAA	-13	NA	87979974	88031138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87981231_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.37	chr17	+	2965	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	1	62	junction_10	448.186777755772	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4880	False	NA	18	True	AATAAA	-15	NA	87979976	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.38	chr17	+	3099	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	458.328974524728	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTGGGGGTACCTTGT	4881	False	NA	16	True	AATAAA	-13	NA	87979977	88031138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88025989_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.4	chr17	+	3086	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	604.495256851165	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4847	False	NA	18	True	AATAAA	-15	NA	87979943	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987503_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024888_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.40	chr17	+	2605	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	473.577646202023	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4885	False	NA	18	True	AATAAA	-15	NA	87979981	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88028310_88028487_88030758
ES.15923.41	chr17	+	3704	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	34	junction_12	464.788200157789	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4892	False	NA	19	True	AATAAA	-16	NA	87979988	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026234_88028310_88028487_88030758
ES.15923.42	chr17	+	8424	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_11	697.093151753926	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4892	False	NA	17	True	AATAAA	-14	NA	87979988	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88021162_88021656_88023682_88023872_88024105_88024154_88026964_88028310_88028487_88030758
ES.15923.43	chr17	+	4725	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	-1	intron_retention	FALSE	canonical	1	6	junction_1	492.20058580488	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4892	False	NA	18	True	AATAAA	-15	NA	87979988	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88028487_88030758
ES.15923.44	chr17	+	4298	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	1	-1	intron_retention	FALSE	canonical	1	11	junction_5	501.89430051445	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4893	False	NA	18	True	AATAAA	-15	NA	87979989	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026964_88028310_88028487_88030758
ES.15923.46	chr17	+	2937	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_1	453.942061892876	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4893	False	NA	17	True	AATAAA	-14	NA	87979989	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980123_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.47	chr17	+	2469	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	14	junction_1	509.288856042314	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4893	False	NA	18	True	AATAAA	-15	NA	87979989	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.48	chr17	+	6675	14	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	232	-5	1	5	intron_retention	FALSE	canonical	3	1624	junction_8	114.520301293194	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTACCTTGTATTTCTTT	4893	False	NA	24	True	AATAAA	-21	NA	87979989	88031146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715
ES.15923.5	chr17	+	3039	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	449.413613006499	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4848	False	NA	19	True	AATAAA	-16	NA	87979944	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020098_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.50	chr17	+	5680	12	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	3	0	intron_retention	FALSE	canonical	1	62	junction_10	476.6748116201	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4895	False	NA	19	True	AATAAA	-16	NA	87979991	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88024882_88028487_88030758
ES.15923.51	chr17	+	7071	15	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_14	458.501468851274	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4895	False	NA	19	True	AATAAA	-16	NA	87979991	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030762
ES.15923.52	chr17	+	7566	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1624	junction_8	118.874204051547	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4895	False	NA	17	True	AATAAA	-14	NA	87979991	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026234_88026715
ES.15923.54	chr17	+	4413	14	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_2	485.003190375647	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4895	False	NA	17	True	AATAAA	-14	NA	87979991	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985775_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026964_88028310_88028487_88030758
ES.15923.55	chr17	+	2949	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	458.328974524728	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4900	False	NA	17	True	AATAAA	-14	NA	87979996	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026121_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.56	chr17	+	4419	14	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	17	-2	intron_retention	FALSE	canonical	0	0	junction_4	484.91163106367	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4909	False	NA	17	True	AATAAA	-14	NA	87980005	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990110_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026964_88028310_88028487_88030758
ES.15923.57	chr17	+	3006	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	458.956449156368	1465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	4919	False	NA	17	True	AATAAA	-14	NA	87980015	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_87980218_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.58	chr17	+	1279	7	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	5644	12703	5596	2	internal_fragment	FALSE	canonical	3	1629	junction_5	15.1620872207255	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTGTATTTTTTTGGC	1101	False	NA	NA	False	ATTAAA	-18	NA	87985632	88004133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922
ES.15923.59	chr17	+	2625	5	ISM	ENSMUSG00000024151.14	ENSMUST00000173097.8	2502	10	8185	12705	8137	0	internal_fragment	FALSE	canonical	3	1629	junction_3	13.4721935853075	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTGTATTTTTTTG	1663	False	NA	NA	False	ATTAAA	-16	NA	87988173	88004131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922
ES.15923.6	chr17	+	2812	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	136	junction_2	441.748341183955	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4852	False	NA	18	True	AATAAA	-15	NA	87979948	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.61	chr17	+	1503	8	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	10645	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	670.03685551998	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	NA	False	NA	18	True	AATAAA	-15	NA	88014613	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026151_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.62	chr17	+	1322	7	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	10700	-2	combination_of_known_splicesites	FALSE	canonical	2	34	junction_5	681.220391813268	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	NA	False	NA	17	True	AATAAA	-14	NA	88014668	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88028310_88028487_88030758
ES.15923.63	chr17	+	1502	7	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	11910	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	697.387983836831	1439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGGGGTACCTTGTA	NA	False	NA	17	True	AATAAA	-14	NA	88015878	88031139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030762
ES.15923.64	chr17	+	3437	5	ISM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	42945	1	18734	-1	3prime_fragment	FALSE	canonical	3	1757	junction_1	86.4620581526949	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	NA	False	NA	18	True	AATAAA	-15	NA	88022702	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ES.15923.65	chr17	+	5228	1	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	21945	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	NA	False	NA	19	True	AATAAA	-16	NA	88025913	88031141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88025900_88031100
ES.15923.9	chr17	+	3991	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	1624	junction_8	137.35014097004	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	4852	False	NA	18	True	AATAAA	-15	NA	87979948	88031140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026234_88026715_88026964_88028310_88028487_88030758
ES.15924.1	chr17	-	1410	2	Antisense	novelGene_ENSMUSG00000024151.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGGCTGTGTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	87979777	87977467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_87978464_87979363
ES.15925.1	chr17	-	963	1	Intergenic	novelGene_13258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGGCTGGAGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	87992401	87991438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_87991400_87992400
ES.15926.1	chr17	+	181	2	Antisense	novelGene_ENSMUSG00000050138.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	88039134	88096662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88039215_88096561
ES.15926.3	chr17	+	179	2	Antisense	novelGene_ENSMUSG00000050138.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	88039135	88096662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88039261_88096608
ES.15926.4	chr17	+	154	2	Antisense	novelGene_ENSMUSG00000050138.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	88039135	88096640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88039243_88096593
ES.15926.5	chr17	+	178	2	Antisense	novelGene_ENSMUSG00000050138.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	88039136	88096662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88039240_88096587
ES.15926.6	chr17	+	1017	1	Intergenic	novelGene_13259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGGTATGGAGTCAG	3587	False	NA	NA	False	ATTAAA	-10	NA	88046305	88047322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88046300_88047300
ES.15926.7	chr17	+	183	1	Intergenic	novelGene_13261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	88096479	88096662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88096500_88096700
ES.15927.1	chr17	-	2530	2	FSM	ENSMUSG00000050138.9	ENSMUST00000055221.9	1972	2	-556	-2	-556	2	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTTTCTAAAGAAATAC	7416	False	NA	NA	False	AATAAA	-33	NA	88105978	88053226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_88054270_88104491
ES.15927.2	chr17	-	1094	2	NNC	ENSMUSG00000050138.9	novel	1972	2	NA	NA	50973	-36	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACGAAACCAAAAA	3763	False	NA	NA	False	NA	NA	NA	88054449	88053264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88054270_88054360
ES.15927.4	chr17	-	189	1	Intergenic	novelGene_13260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAGAGATAGCA	NA	False	NA	NA	False	AGTAAA	-7	NA	88076307	88076118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88076100_88076300
ES.15928.1	chr17	+	5534	2	NNC	ENSMUSG00000117466.2	novel	2452	2	NA	NA	848	-7120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAAACTTGGTTCTTTT	2671	False	NA	NA	False	NA	NA	NA	88133348	88139305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88135729_88136151
ES.15929.1	chr17	-	4895	2	Intergenic	novelGene_13262	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAAGGAGAGTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	88165483	88160379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88164153_88164361
ES.15929.2	chr17	-	4875	2	Intergenic	novelGene_13263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88165484	88160401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88164167_88164374
ES.1593.1	chr1	+	2085	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-226	737	-173	-737	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGACAACTCAGAAGAT	333	False	NA	NA	False	ATTAAA	-20	NA	152683414	152712004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
ES.1593.2	chr1	+	2014	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	64	518	-24	-518	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGCTTGGGTTCCAG	623	False	NA	NA	False	AATAAA	-14	NA	152683704	152712223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
ES.1593.3	chr1	+	1112	5	ISM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	25254	521	9575	-521	3prime_fragment	FALSE	canonical	0	0	junction_1	10.3531396204243	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAATTGCTTGGGTTC	NA	False	NA	NA	False	AATAAA	-11	NA	152708894	152712220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
ES.1593.4	chr1	+	2481	1	Genic_Genomic	ENSMUSG00000026480.13	novel	NA	NA	NA	NA	11527	585	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAATCCAAATA	NA	False	NA	NA	False	NA	NA	NA	152710846	152713327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_152710800_152713300
ES.15930.1	chr17	+	3998	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-16565	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	848.853082432735	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88265924	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88266016_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.11	chr17	+	4387	9	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-58	-4	intron_retention	FALSE	canonical	3	2207	junction_2	216.300572121296	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATTTTTCCATTTTC	NA	False	NA	27	True	AATAAA	-16	NA	88282431	88298316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88298059_88298151
ES.15930.13	chr17	+	4288	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	837.623946973348	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282446	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296857_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.14	chr17	+	3967	8	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	-36	495	-36	-495	5prime_fragment	FALSE	canonical	3	2207	junction_2	225.492114889969	2251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGTGATAAAATGAACTT	NA	False	NA	NA	False	AGTAAA	-4	NA	88282453	88297825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621
ES.15930.15	chr17	+	4284	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	841.091545347069	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282454	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298150
ES.15930.16	chr17	+	4076	9	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-28	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	850.761120629639	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282461	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88298151
ES.15930.17	chr17	+	4260	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1075.61573523101	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGACCATTTTTCC	NA	False	NA	21	True	AATAAA	-10	NA	88282478	88298310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287826_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297857_88298059_88298151
ES.15930.2	chr17	+	4364	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-2746	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1056.12276275062	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88279743	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88279962_88283439_88283679_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.21	chr17	+	4001	9	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	852.131701968657	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282478	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297964_88298059_88298151
ES.15930.22	chr17	+	4251	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-10	10018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	805.485046416133	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCTGTGGTAATGTGAA	NA	False	NA	NA	False	AATAAA	-10	NA	88282479	88308338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151_88298295_88308322
ES.15930.3	chr17	+	5382	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	-1078	-53	-1078	53	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATAATGGTTATTGA	NA	False	NA	84	True	ATTAAA	-22	NA	88281411	88298373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.33	chr17	+	4235	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	848.853082432735	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282490	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287624_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.34	chr17	+	4334	9	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	1	9	1	-9	intron_retention	FALSE	canonical	3	2207	junction_2	266.771174183044	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282490	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858
ES.15930.38	chr17	+	4243	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	30827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	805.485046416133	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACCTAAAGCAGAGGCA	NA	False	NA	NA	False	AATAAA	-40	NA	88282490	88329147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151_88298298_88329131
ES.15930.39	chr17	+	3609	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	805.485046416133	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282490	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88292959_88293599_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.4	chr17	+	5611	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	-1065	-295	-1065	295	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTTTGAAGAGACTTT	NA	False	NA	NA	False	AATAAA	-26	NA	88281424	88298615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.40	chr17	+	4402	12	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	5110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1014.69345613212	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTTTTTCACTAATGCA	NA	False	NA	NA	False	ATTAAA	-20	NA	88282490	88303430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151_88298268_88298755_88298849_88303318
ES.15930.43	chr17	+	9282	7	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	2207	junction_1	212.588020985818	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282490	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296945_88297621_88298059_88298151
ES.15930.44	chr17	+	3038	4	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	1	4122	1	1991	5prime_fragment	FALSE	canonical	3	2207	junction_2	20.0720922897661	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAATCTACCTGAAGAATA	NA	False	NA	NA	False	NA	NA	NA	88282490	88294198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873
ES.15930.45	chr17	+	8499	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	848.853082432735	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282490	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88283843_88284378_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.46	chr17	+	4936	9	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	2207	junction_2	261.504182566933	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282490	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.47	chr17	+	4485	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	840.682791280728	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282492	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88283071_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.5	chr17	+	4130	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-1062	-2	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	842.800417186582	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTTTTCCATTTTCTT	NA	False	NA	29	True	AATAAA	-18	NA	88281427	88298318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88281653_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.50	chr17	+	4224	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	836.428651403626	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282499	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295875_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.51	chr17	+	4257	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	10	25649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	805.485046416133	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAACAAGCAAAGAACCAG	NA	False	NA	NA	False	TATAAA	-35	NA	88282499	88323969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151_88298316_88323948
ES.15930.57	chr17	+	4210	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	837.623946973348	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282508	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296867_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.58	chr17	+	4222	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_2	837.407300932062	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTTTTCCATTTTCTT	NA	False	NA	29	True	AATAAA	-18	NA	88282508	88298318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290880_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.59	chr17	+	5935	5	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	19	3	-14	-3	intron_retention	FALSE	canonical	3	2207	junction_2	202.675078635732	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282508	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613
ES.15930.6	chr17	+	3904	9	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-1043	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	899.472267151689	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88281446	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88281653_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.61	chr17	+	4214	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	842.0764165787	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282511	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297627_88297777_88297858_88298059_88298151
ES.15930.62	chr17	+	9008	9	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	2207	junction_1	241.863468717374	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282514	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.63	chr17	+	5230	6	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	29	9	-4	-9	intron_retention	FALSE	canonical	3	2207	junction_2	234.210674393803	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282518	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571
ES.15930.65	chr17	+	5076	7	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	2207	junction_2	221.467391630361	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282519	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88296690_88296854_88296945_88297621
ES.15930.68	chr17	+	14868	3	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	2243	junction_1	197	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282519	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88291043_88291873_88298059_88298151
ES.15930.69	chr17	+	3824	8	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	960.993045059672	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	NA	False	NA	30	True	AATAAA	-19	NA	88282519	88298319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282802_88291867_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.70	chr17	+	4076	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	842.0764165787	2257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282520	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296918_88297735_88297777_88297858_88298059_88298151
ES.15930.72	chr17	+	8890	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	844.918463448718	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88282523	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88287819_88290872_88291043_88291873_88292528_88292630_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.73	chr17	+	7259	9	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	2243	junction_2	232.596720473441	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88282532	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88282834_88287618_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.75	chr17	+	4419	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1055.72803789612	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282560	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88283439_88283679_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.76	chr17	+	4404	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	650	-9	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	838.263166196911	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88283172	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88283679_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.77	chr17	+	9021	8	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-1575	-3	intron_retention	FALSE	canonical	3	2243	junction_1	203.503196585233	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88285555	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.78	chr17	+	6404	6	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	3475	9	-1166	-9	intron_retention	FALSE	canonical	3	2207	junction_1	237.175884102916	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88285964	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854
ES.15930.79	chr17	+	5233	8	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-169	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	943.510163470128	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88286961	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88297777_88297858_88298059_88298150
ES.15930.8	chr17	+	4334	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	848.853082432735	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTTCCATTTTCTTT	NA	False	NA	30	True	AATAAA	-19	NA	88282422	88298319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282846_88287613_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.80	chr17	+	5402	6	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	2880	-9	intron_retention	FALSE	canonical	3	2243	junction_1	239.246650969246	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88290010	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88291043_88291873_88294410_88295613_88295883_88296571_88297777_88297858_88298059_88298151
ES.15930.81	chr17	+	4927	5	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	3383	-3	intron_retention	FALSE	canonical	3	2243	junction_1	189.439304263925	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATTTTTCCATTTTCT	NA	False	NA	28	True	AATAAA	-17	NA	88290513	88298317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88291043_88291873_88294410_88295613_88296690_88296854_88296945_88297621
ES.15930.82	chr17	+	2682	5	ISM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	10405	9	5764	-9	intron_retention	FALSE	canonical	3	2616	junction_4	40.8495716011808	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88292894	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621
ES.15930.83	chr17	+	3506	3	NIC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	5803	0	intron_retention	FALSE	canonical	3	2616	junction_2	42.5	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88292933	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88294410_88295613_88296945_88297621
ES.15930.84	chr17	+	1916	7	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	6354	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1025.48622613861	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	False	NA	22	True	AATAAA	-11	NA	88293484	88298311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88294410_88295613_88295883_88296571_88296700_88296865_88296945_88297621_88297777_88297858_88298059_88298151
ES.15930.9	chr17	+	4215	11	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	801.762863944196	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282422	88298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88292528_88292630_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ES.15931.1	chr17	+	152	1	Intergenic	novelGene_13265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88361268	88361420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88361300_88361400
ES.15932.1	chr17	-	242	1	Intergenic	novelGene_13264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAAGGAGGCCAGGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	88276327	88276085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88276100_88276300
ES.15933.1	chr17	-	9605	1	Antisense	novelGene_ENSMUSG00000005370.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAGAAAGGATTAAGA	NA	False	NA	NA	False	NA	NA	NA	88294196	88284591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88284600_88294200
ES.15933.2	chr17	-	5722	3	Antisense	novelGene_ENSMUSG00000005370.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAGAAAGGATTAAGA	NA	False	NA	NA	False	NA	NA	NA	88294196	88284591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88287817_88290870_88291043_88291871
ES.15933.3	chr17	-	8723	2	Antisense	novelGene_ENSMUSG00000005370.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	88294195	88284641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88291041_88291871
ES.15934.1	chr17	-	4887	1	Genic_Genomic	ENSMUSG00000005371.16	novel	NA	NA	NA	NA	8158	2921	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGTTTTGGCCACG	5139	False	NA	NA	False	AGTAAA	-6	NA	88300252	88295365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_88295400_88300300
ES.15934.10	chr17	-	3844	23	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	683	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	25.2200235284755	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88371632	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88371522
ES.15934.13	chr17	-	4040	23	NIC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-54	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_22	24.9357852980361	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88372369	88298289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372062
ES.15934.15	chr17	-	3905	24	NNC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-752	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	31.3555740289396	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88373471	88298289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323018_88323141_88372436_88372552_88373408
ES.15934.16	chr17	-	4542	23	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-540	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	24.5614846645234	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88373259	88298289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321965_88322826_88322909_88323015_88323141_88372436
ES.15934.17	chr17	-	3969	24	NNC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-782	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	34.4002901469278	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88373501	88298289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300587_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304941_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436_88372579_88373390
ES.15934.20	chr17	-	3933	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-732	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	25.6983372392457	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGTCTGAATTTACC	NA	False	NA	-3	True	AATAAA	-14	NA	88373451	88298289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88372579_88373393
ES.15934.22	chr17	-	4461	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-777	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	29.9791357819171	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGTCTGAATTTAC	NA	False	NA	-4	True	AATAAA	-13	NA	88373496	88298290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316523_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88373083_88373386
ES.15934.23	chr17	-	4767	23	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-779	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	25.8807261001517	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGTCTGAATTTAC	NA	False	NA	-4	True	AATAAA	-13	NA	88373498	88298290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316523_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
ES.15934.25	chr17	-	4427	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-742	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.6983372392457	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATGTTGTCTGAATTT	NA	False	NA	-6	True	AATAAA	-11	NA	88373461	88298292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88373083_88373410
ES.15934.27	chr17	-	5191	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-752	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	29.5015298696573	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAATGGTCATTTTTT	NA	False	NA	-45	True	ATTAAA	-26	NA	88373471	88298331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88348650_88349116_88372436
ES.15934.29	chr17	-	3438	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-756	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.6983372392457	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGTTTCTGGTATCCT	NA	False	NA	-3	True	AAAACA	-20	NA	88373475	88298834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88372480_88373268
ES.15934.30	chr17	-	4236	23	FSM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	-1035	552	-772	7	multi-exon	FALSE	canonical	3	18	junction_20	22.0632542949277	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCAATGTTTCTGGTA	NA	False	NA	-7	True	AAAACA	-16	NA	88373491	88298838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
ES.15934.33	chr17	-	3414	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-277	-141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.6983372392457	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTAGTTCGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	88372996	88298986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88372478_88372659
ES.15934.35	chr17	-	2140	19	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-763	-2861	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	24.662662337636	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGGTGGCATCTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	88373482	88303501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88372552_88373411
ES.15934.36	chr17	-	2041	2	ISM	ENSMUSG00000005371.16	ENSMUST00000135639.8	2022	12	16	9598	16	-7803	5prime_fragment	FALSE	canonical	3	96	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88316108	88308443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_88310398_88316021
ES.15934.37	chr17	-	3945	3	NIC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-3530	7482	intron_retention	FALSE	canonical	3	57	junction_2	5.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88319654	88315540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88316351_88316437_88316550_88316631
ES.15934.38	chr17	-	1180	1	NIC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-600	7478	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88316724	88315544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88315500_88316700
ES.15934.39	chr17	-	1515	5	ISM	ENSMUSG00000005371.16	ENSMUST00000005504.15	4019	23	-781	21729	-781	3007	5prime_fragment	FALSE	canonical	3	35	junction_2	17.0642169465815	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCCATGGAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	88373500	88320015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
ES.15934.4	chr17	-	4452	24	NNC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-751	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.6983372392457	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373470	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436_88373083_88373398
ES.15934.5	chr17	-	3963	24	NNC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-773	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	27.1243722323321	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373492	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436_88372579_88373402
ES.15934.6	chr17	-	5122	7	NIC	ENSMUSG00000005371.16	novel	2022	12	NA	NA	2667	-2	intron_retention	FALSE	canonical	3	83	junction_2	9.8488578017961	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88305743	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88299785_88300246_88300356_88300574_88300683_88301164_88303608_88303694_88303772_88304758_88304845_88304940
ES.15934.7	chr17	-	4658	24	NNC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-752	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	27.1243722323321	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373471	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436_88372462_88372569
ES.15934.8	chr17	-	5776	22	NIC	ENSMUSG00000005371.16	novel	4019	23	NA	NA	-772	-2	intron_retention	FALSE	canonical	3	35	junction_19	20.0631655589266	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373491	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
ES.15934.9	chr17	-	4749	22	NIC	ENSMUSG00000005371.16	novel	3753	23	NA	NA	-516	-2	intron_retention	FALSE	canonical	3	18	junction_19	22.5760493562348	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCTGAATTTACCA	NA	False	NA	-2	True	AATAAA	-15	NA	88373235	88298288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_88299604_88299685_88299785_88300246_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
ES.15935.1	chr17	+	1559	2	Intergenic	novelGene_13266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTGCTTTTCTACT	NA	False	NA	NA	False	NA	NA	NA	88373871	88383281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88373996_88381846
ES.15935.2	chr17	+	520	2	Intergenic	novelGene_13267	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTGTTTGTACTGTT	NA	False	NA	NA	False	TTTAAA	-14	NA	88373926	88410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88373996_88409974
ES.15935.3	chr17	+	4534	1	Intergenic	novelGene_13269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAGAAAATTGAC	NA	False	NA	NA	False	NA	NA	NA	88389472	88394006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88389500_88394000
ES.15935.4	chr17	+	3358	1	Intergenic	novelGene_13271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGAATCTTTTAATCCC	NA	False	NA	NA	False	NA	NA	NA	88392500	88395858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88392500_88395900
ES.15935.5	chr17	+	177	1	Intergenic	novelGene_13272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	88398084	88398261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88398100_88398300
ES.15935.6	chr17	+	177	1	Intergenic	novelGene_13273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88398917	88399094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88398900_88399100
ES.15935.7	chr17	+	198	1	Intergenic	novelGene_13274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATCTTCTTAAAAAGTA	NA	False	NA	NA	False	TTTAAA	-7	NA	88402386	88402584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88402400_88402600
ES.15936.1	chr17	-	174	1	Intergenic	novelGene_13268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTCTGAGT	1591	False	NA	NA	False	NA	NA	NA	88386973	88386799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88386800_88387000
ES.15937.1	chr17	-	158	1	Intergenic	novelGene_13270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	88392376	88392218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88392200_88392400
ES.15938.1	chr17	-	170	1	Intergenic	novelGene_13275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	88410752	88410582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88410600_88410800
ES.15939.1	chr17	+	135	1	Intergenic	novelGene_13276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	88419158	88419293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88419200_88419300
ES.1594.1	chr1	+	4810	1	Antisense	novelGene_ENSMUSG00000100394.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	4035	False	NA	NA	False	NA	NA	NA	152754594	152759404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_152754600_152759400
ES.1594.2	chr1	+	12670	2	Antisense	novelGene_ENSMUSG00000100394.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTCTTTTAAGATTAAAT	4122	False	NA	NA	False	NA	NA	NA	152754681	152767565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_152763774_152763987
ES.1594.3	chr1	+	154	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	152760867	152761021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_152760900_152761000
ES.15940.1	chr17	-	147	1	Intergenic	novelGene_13277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	88428922	88428775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88428800_88428900
ES.15941.1	chr17	+	3689	4	Intergenic	novelGene_13278	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTCAATATATAGACA	NA	False	NA	NA	False	AATAAA	-17	NA	88466189	88478280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88466247_88468152_88471152_88471187_88471723_88478182
ES.15941.2	chr17	+	838	3	Antisense	novelGene_ENSMUSG00000097676.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.5	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTTCTCCTTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	88466208	88474687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88466247_88472347_88472573_88474112
ES.15941.3	chr17	+	5197	4	NNC	ENSMUSG00000117369.2	novel	725	2	NA	NA	-7905	1417	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.4142135623731	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTCTTGATATT	NA	False	NA	NA	False	NA	NA	NA	88468009	88479449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88472573_88476260_88476347_88477739_88477948_88479109
ES.15941.4	chr17	+	1704	2	Intergenic	novelGene_13279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTTCTCCTTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	88471443	88474687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88472573_88474112
ES.15941.5	chr17	+	5212	1	Genic_Genomic	ENSMUSG00000117369.2	novel	NA	NA	NA	NA	-1691	1403	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGCCTAAAATTCATT	NA	False	NA	NA	False	NA	NA	NA	88474223	88479435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_88474200_88479400
ES.15942.1	chr17	+	630	5	Intergenic	novelGene_13280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACAAAAAAAACACCCC	NA	False	NA	NA	False	NA	NA	NA	88499780	88528825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88499853_88506614_88506838_88507034_88507171_88507620_88507786_88528791
ES.15942.2	chr17	+	589	4	Intergenic	novelGene_13281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTCCTCTTTAATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	88499802	88507791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88499853_88500704_88500850_88506614_88506838_88507620
ES.15943.1	chr17	+	308	1	Intergenic	novelGene_13282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACCTATGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	88558098	88558406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88558100_88558400
ES.15943.2	chr17	+	2995	1	Antisense	novelGene_ENSMUSG00000117351.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTAATTTAGTAATCTG	NA	False	NA	NA	False	NA	NA	NA	88558099	88561094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_88558100_88561100
ES.15944.1	chr17	-	1419	4	Intergenic	novelGene_13283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATCTCTTAGTTTTAC	NA	False	NA	NA	False	GATAAA	-17	NA	88653175	88649951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88651124_88651359_88651423_88652314_88652396_88653072
ES.15945.1	chr17	-	174	1	Intergenic	novelGene_13284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88741614	88741440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88741400_88741600
ES.15946.1	chr17	+	5162	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	-77	0	-77	0	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748061	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.10	chr17	+	4945	4	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	133.693679730943	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTGTTATTTGTG	NA	False	NA	13	True	AATAAA	-17	NA	88748142	88797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88793830
ES.15946.11	chr17	+	4866	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	5	214	5	-214	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAATCTTCTGAGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	88748143	88797747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.12	chr17	+	4497	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	7	-512	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGTAGTCAAATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	88748145	88797449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
ES.15946.13	chr17	+	4464	4	ISM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	8	7606	8	-4324	5prime_fragment	FALSE	canonical	3	270	junction_3	7.34846922834953	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	88748146	88790355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703
ES.15946.14	chr17	+	4292	2	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748148	88797958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88793830
ES.15946.15	chr17	+	4911	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	108.388929323986	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748148	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770565_88783320_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.16	chr17	+	3245	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	11	1451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.8788423674	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTCTTATCGTGGTAC	NA	False	NA	NA	False	AATAAA	-21	NA	88748149	88796130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791900_88793830
ES.15946.17	chr17	+	5083	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	109.8788423674	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGCTTTGTTATT	NA	False	NA	9	True	AATAAA	-13	NA	88748149	88797955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793815
ES.15946.18	chr17	+	4086	8	NNC	ENSMUSG00000034998.19	novel	1824	7	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	123.043546298513	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTTTGTTATTTGTGA	NA	False	NA	14	True	AATAAA	-18	NA	88748149	88797960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830_88795902_88795983_88796944_88797848
ES.15946.19	chr17	+	4834	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	133.916989213468	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGCTTTGTTATTTG	NA	False	NA	11	True	AATAAA	-15	NA	88748157	88797957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830_88797260_88797418
ES.15946.2	chr17	+	5278	7	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	125.802314057501	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748097	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88767463_88767616_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.20	chr17	+	4644	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	-3	-351	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATGTTGCCATCATAT	NA	False	NA	NA	False	ATTAAA	-20	NA	88748159	88797610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
ES.15946.21	chr17	+	5132	7	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	126.273072699166	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748159	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88767028_88767097_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.22	chr17	+	5306	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	100.061181284252	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748166	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.23	chr17	+	4747	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	9	-236	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTTTTTCTGATG	NA	False	NA	NA	False	ACTAAA	-38	NA	88748171	88797725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
ES.15946.24	chr17	+	2967	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	79	2039	15	1243	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCGTTTCCATGTTAG	NA	False	NA	NA	False	NA	NA	NA	88748217	88795922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.25	chr17	+	5269	7	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	118	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.632648633061	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748320	88797958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88783763_88783884_88786703_88786769_88791828_88791898_88793830
ES.15946.26	chr17	+	4962	5	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	129.806346146866	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748441	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88786703_88786769_88793830
ES.15946.27	chr17	+	5376	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	733	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	105.647337874648	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTGTTATTTGTG	NA	False	NA	13	True	AATAAA	-17	NA	88748935	88797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88749403_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.28	chr17	+	2599	1	Intergenic	novelGene_13285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAACAAAAAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	88755713	88758312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88755700_88758300
ES.15946.29	chr17	+	179	1	Intergenic	novelGene_13288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	88806875	88807054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_88806900_88807100
ES.15946.3	chr17	+	3836	25	Fusion	ENSMUSG00000034709.9_ENSMUSG00000034998.19	novel	1824	7	NA	NA	-11	0	multi-exon	FALSE	canonical	0	0	junction_4	71.4266815226168	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88748127	88895795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.30	chr17	+	3111	23	NNC	ENSMUSG00000034709.9	novel	1112	5	NA	NA	-11282	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1274317461657	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCGGTCTGTGACAG	NA	False	NA	14	True	AATAAA	-15	NA	88826263	88895793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88826398_88828895_88828935_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.31	chr17	+	3158	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	-13	-4	-13	4	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTGTGACAGTGTGGT	NA	False	NA	20	True	AATAAA	-21	NA	88837532	88895799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.32	chr17	+	2796	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	90	255	-8	-253	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCCTGTATTGTCAT	NA	False	NA	NA	False	GATAAA	-22	NA	88837635	88895540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.33	chr17	+	2522	20	NIC	ENSMUSG00000034709.9	novel	3141	22	NA	NA	-7	-277	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.9965735356191	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCTTAAATTGTCAGA	NA	False	NA	NA	False	AATAGA	-16	NA	88837636	88895516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88837747_88850272_88850342_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.35	chr17	+	4619	21	NNC	ENSMUSG00000034709.9	novel	3141	22	NA	NA	10	-273	intron_retention	FALSE	non_canonical	0	0	junction_15	18.4539291209216	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAATTGTCAGATGTC	NA	False	NA	NA	False	GATAAA	-2	NA	88837653	88895520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880182_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88889942_88891280_88891410_88895111
ES.15946.37	chr17	+	1158	6	ISM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	123	37980	25	6951	5prime_fragment	FALSE	canonical	3	56	junction_5	9.83056458195561	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTGTGCAGGGATAG	NA	False	NA	NA	False	AATAAA	-14	NA	88837668	88857815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218
ES.15946.39	chr17	+	2706	18	ISM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	19287	5	-12712	-3	3prime_fragment	FALSE	canonical	3	56	junction_1	10.3097360509106	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTTTTCGGTCTGTGA	NA	False	NA	11	True	AATAAA	-12	NA	88856832	88895790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.4	chr17	+	5205	7	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.607499349334	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88783763_88783884_88786703_88786769_88791828_88791898_88793830
ES.15946.40	chr17	+	1968	14	NNC	ENSMUSG00000034709.9	novel	1112	5	NA	NA	-6188	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2854000021188	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCTTAAATTGTCAGA	NA	False	NA	NA	False	AATAGA	-16	NA	88863356	88895516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88863504_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.41	chr17	+	5048	12	NNC	ENSMUSG00000034709.9	novel	3141	22	NA	NA	-3330	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	24.1954848598516	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88866214	88895795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88866294_88869536_88869674_88873068_88873375_88873660_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ES.15946.42	chr17	+	3036	3	NIC	ENSMUSG00000034709.9	novel	3141	22	NA	NA	1561	0	intron_retention	FALSE	canonical	3	83	junction_2	3.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88887718	88895795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88889942_88891280_88891410_88895111
ES.15946.5	chr17	+	5016	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
ES.15946.6	chr17	+	4531	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	109.937197981393	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTTTGTTATTTGT	NA	False	NA	12	True	AATAAA	-16	NA	88748138	88797958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ES.15946.7	chr17	+	4996	7	NNC	ENSMUSG00000034998.19	novel	1824	7	NA	NA	3	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.607499349334	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGAGTTTAACTGCCA	NA	False	NA	NA	False	ATTAAA	-28	NA	88748141	88797755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88748313_88770140_88770692_88783283_88783379_88783763_88783884_88786703_88786769_88791828_88791898_88793830
ES.15946.8	chr17	+	4711	4	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	3	-237	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	133.693679730943	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGTTTTTTTTCTGAT	NA	False	NA	NA	False	ACTAAA	-37	NA	88748141	88797724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88793830
ES.15946.9	chr17	+	3846	2	ISM	ENSMUSG00000034998.19	ENSMUST00000134107.2	2892	3	-44	11682	3	3350	5prime_fragment	FALSE	canonical	3	288	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGTTACTCCCTC	NA	False	NA	NA	False	NA	NA	NA	88748141	88773815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_88748313_88770140
ES.15947.1	chr17	-	3028	6	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACATCCCCCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	88795924	88748158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88748312_88770139_88770690_88783281_88783377_88786701_88786767_88791826_88791896_88793828
ES.15947.2	chr17	-	4813	1	Intergenic	novelGene_13286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAGCTGGAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	88780914	88776101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88776100_88780900
ES.15947.3	chr17	-	170	1	Intergenic	novelGene_13287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATATATATTTAAAAA	6078	False	NA	NA	False	NA	NA	NA	88785936	88785766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88785800_88785900
ES.15947.4	chr17	-	9167	2	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCAAACCCATATAGTC	NA	False	NA	NA	False	NA	NA	NA	88801031	88789931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88791896_88793828
ES.15947.5	chr17	-	2156	2	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88792873	88789955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88790219_88790980
ES.15947.6	chr17	-	5964	1	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CACTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88795924	88789960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88790000_88795900
ES.15947.7	chr17	-	1949	1	Antisense	novelGene_ENSMUSG00000034998.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACCAAAACAGACTTAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	88796467	88794518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88794500_88796500
ES.15948.1	chr17	-	178	1	Intergenic	novelGene_13289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATAATATAAAA	NA	False	NA	NA	False	NA	NA	NA	88817301	88817123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88817100_88817300
ES.15949.1	chr17	+	4843	5	NNC	ENSMUSG00000033855.16	novel	357	3	NA	NA	-33	-837	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTCTTGCTGTGCTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	88905078	88955287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88905170_88942548_88944511_88951765_88951969_88952642_88953167_88953224
ES.15949.2	chr17	+	2203	2	FSM	ENSMUSG00000033855.16	ENSMUST00000137138.2	767	2	-12	-1424	-12	-282	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTTTATTTCTACC	NA	False	NA	NA	False	AAAACA	-26	NA	88905099	88944681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88905170_88942548
ES.15949.3	chr17	+	2493	2	FSM	ENSMUSG00000033855.16	ENSMUST00000137138.2	767	2	0	-1726	0	20	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCGAAGAAAGTGGTTAA	NA	False	NA	NA	False	NA	NA	NA	88905111	88944983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_88905170_88942548
ES.15949.4	chr17	+	2844	4	NNC	ENSMUSG00000033855.16	novel	357	3	NA	NA	4	-839	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTCTTGCTGTGCTG	NA	False	NA	NA	False	ATTAAA	-11	NA	88905115	88955285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88905170_88951765_88951969_88952642_88953169_88953224
ES.15949.5	chr17	+	4867	4	NIC	ENSMUSG00000033855.16	novel	357	3	NA	NA	4	-834	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGCTGTGCTGTGAAC	NA	False	NA	NA	False	ATTAAA	-16	NA	88905115	88955290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88905170_88942548_88944511_88951765_88951969_88952642
ES.15949.6	chr17	+	3468	5	NNC	ENSMUSG00000033855.16	novel	357	3	NA	NA	-3	802	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATCATTCCTTATGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	88905120	88953954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88905170_88942548_88944511_88951765_88951969_88952642_88953162_88953219
ES.15949.7	chr17	+	2343	2	NNC	ENSMUSG00000033855.16	novel	767	2	NA	NA	1643	-281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTTATTTCTACCA	NA	False	NA	NA	False	AAAACA	-27	NA	88936434	88944682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_88936644_88942548
ES.1595.1	chr1	-	5673	20	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	4448	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	97.874163089929	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTGTAGAGGATTTAT	NA	False	NA	-1	True	ATTAAA	-21	NA	152742461	152712743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732384_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331
ES.1595.10	chr1	-	5514	21	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	82.7114865058052	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778396	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.100	chr1	-	5686	22	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-95	-109	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	76.9866437160213	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATTTGATTTGGGG	NA	False	NA	-7	True	AATAAA	-17	NA	152778492	152712855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721257_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.101	chr1	-	5946	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-116	-109	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_22	89.5804967971668	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATTTGATTTGGGG	NA	False	NA	-7	True	AATAAA	-17	NA	152778513	152712855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.102	chr1	-	5573	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-9	-109	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	68.9579384763753	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATTTGATTTGGGG	NA	False	NA	-7	True	AATAAA	-17	NA	152778406	152712855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732384_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.103	chr1	-	4775	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-1	859	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAGGAGGAAAGAGGAC	NA	False	NA	NA	False	AATAAA	-17	NA	152778398	152713761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.104	chr1	-	3810	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-10	22	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTTGAAATTATTCTTA	NA	False	NA	NA	False	AATAAA	-37	NA	152778407	152714598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.105	chr1	-	4063	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-116	-19	-116	19	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTAGTTGAAATTATTC	NA	False	NA	NA	False	AATAAA	-34	NA	152778513	152714601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.106	chr1	-	4209	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-126	17	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGTAGTTGAAATTAT	NA	False	NA	NA	False	AATAAA	-32	NA	152778523	152714603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.107	chr1	-	3946	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-14	17	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGTAGTTGAAATTAT	NA	False	NA	NA	False	AATAAA	-32	NA	152778411	152714603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.108	chr1	-	4447	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-7	2	intron_retention	FALSE	canonical	3	48	junction_20	75.4201835163019	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTTGCTGACTGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	152778404	152714618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.109	chr1	-	4050	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	82.062715384018	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGCTTTGCTGACTG	NA	False	NA	NA	False	AATAAA	-13	NA	152778396	152714622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.11	chr1	-	5579	22	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	67.3110355751869	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778413	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.110	chr1	-	3712	21	ISM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-22	2726	2	-851	5prime_fragment	FALSE	canonical	3	75	junction_7	55.9871413808564	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGACTTAAAACATAGTT	NA	False	NA	NA	False	NA	NA	NA	152778395	152715471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.111	chr1	-	3368	20	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-439	-2274	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_15	83.8864157532222	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCTGACAACCAGCT	NA	False	NA	NA	False	AATGAA	-9	NA	152778836	152716894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.112	chr1	-	158	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	152722552	152722394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152722400_152722600
ES.1595.113	chr1	-	1481	8	ISM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-9	19489	-9	-12433	5prime_fragment	FALSE	canonical	3	249	junction_7	20.4869296312133	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGCAGCAGCAAGACA	NA	False	NA	NA	False	NA	NA	NA	152778406	152734109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.114	chr1	-	6660	7	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-464	-12433	intron_retention	FALSE	canonical	2	11	junction_6	107.272886705925	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGCAGCAGCAAGACA	NA	False	NA	NA	False	NA	NA	NA	152778861	152734109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152734766_152735102_152735254_152736200_152736273_152737431_152742465_152744002_152744121_152746510_152746539_152778259
ES.1595.115	chr1	-	5787	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCTAGTTGCTGCCAG	NA	False	NA	NA	False	AAAAAG	-4	NA	152769566	152763779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152763800_152769600
ES.1595.12	chr1	-	5756	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	81.5697870862077	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778407	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.13	chr1	-	5981	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	104.425662594328	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778525	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721257_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732365_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.14	chr1	-	6207	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-404	-1875	-404	0	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778801	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.15	chr1	-	5111	6	ISM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	56425	0	2723	0	intron_retention	FALSE	canonical	3	176	junction_5	48.5238085891864	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152721948	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786
ES.1595.16	chr1	-	6220	21	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_18	88.9531337278232	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778401	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732384_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742484_152744002_152744121_152746510_152746543_152778259
ES.1595.17	chr1	-	5859	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	85.8760398183104	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778519	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152778259
ES.1595.18	chr1	-	6407	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_22	89.5804967971668	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778864	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.2	chr1	-	5931	21	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-10	2	intron_retention	FALSE	canonical	0	0	junction_6	71.2235915971667	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTGTAGAGGATTTAT	NA	False	NA	-1	True	ATTAAA	-21	NA	152778407	152712743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152719902_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.21	chr1	-	6011	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	95.0904454539738	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778515	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753882_152778259
ES.1595.22	chr1	-	5924	24	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	112.877620801835	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778400	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721290_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152778259
ES.1595.23	chr1	-	5605	22	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	60.2655499264423	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.25	chr1	-	6001	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	87.4744827019111	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778504	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.26	chr1	-	5768	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	87.7774232536923	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778395	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.27	chr1	-	6049	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	82.062715384018	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778518	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.28	chr1	-	5629	22	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	69.9673393193465	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778406	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.29	chr1	-	5716	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	87.3843036759212	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778395	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152772529_152772595_152778259
ES.1595.3	chr1	-	6244	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-452	2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTGTAGAGGATTTAT	NA	False	NA	-1	True	ATTAAA	-21	NA	152778849	152712743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.30	chr1	-	6057	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778513	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.31	chr1	-	6290	22	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-30	0	intron_retention	FALSE	canonical	1	1	junction_19	87.6380414195507	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778427	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152778259
ES.1595.33	chr1	-	6195	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_22	95.2701660377581	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778514	152712745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.35	chr1	-	6464	22	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	48	junction_20	83.6839969042378	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778411	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.37	chr1	-	5592	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	93.8282676044533	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778407	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724595_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.38	chr1	-	6202	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_19	99.1338290799509	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778556	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.39	chr1	-	5700	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	87.9968655527425	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778418	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721224_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.4	chr1	-	6175	21	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	3	2	intron_retention	FALSE	canonical	3	176	junction_5	38.5170092296897	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGTGTAGAGGATTTAT	NA	False	NA	-1	True	ATTAAA	-21	NA	152778394	152712743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.40	chr1	-	5656	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	86.651291282887	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778400	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724619_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.41	chr1	-	5788	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	89.907263976291	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778487	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.42	chr1	-	5360	21	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	372	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.5701069858903	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152746537	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724619_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510
ES.1595.43	chr1	-	5914	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_19	93.9386639770444	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778406	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.44	chr1	-	5600	22	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	408	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	70.0955615934564	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152777965	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152777879
ES.1595.45	chr1	-	6019	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	96.0161848360608	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778524	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.46	chr1	-	2820	4	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	7777	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.589693223434	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152716894	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715926_152716052_152716224_152716775
ES.1595.48	chr1	-	5661	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	106.055702267587	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778399	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731748_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.49	chr1	-	6007	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	88.5382207237395	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778524	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753882_152778259
ES.1595.5	chr1	-	6079	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-425	1	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGTGTGTAGAGGATTTA	NA	False	NA	-2	True	ATTAAA	-20	NA	152778822	152712744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.50	chr1	-	6261	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_9	107.158114812869	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778392	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152722015_152724484_152724619_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753882_152778259
ES.1595.51	chr1	-	5809	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	89.5039590056549	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778396	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732384_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.52	chr1	-	5833	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	86.7895716780888	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778407	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732384_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.53	chr1	-	5291	18	NIC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	10636	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	96.3137534329652	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152736273	152712746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721290_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200
ES.1595.54	chr1	-	6747	20	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-127	-1	intron_retention	FALSE	canonical	3	176	junction_5	39.5142247958737	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCGGTGTGTAGAGGAT	NA	False	NA	-5	True	ATTAAA	-17	NA	152778524	152712747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.57	chr1	-	6265	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	11	-2	intron_retention	FALSE	canonical	3	21	junction_17	81.9933076191653	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778386	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.58	chr1	-	5800	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.2443662894022	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778406	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720150_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.60	chr1	-	5981	24	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-115	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	96.0944911466493	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778512	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736580_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.61	chr1	-	5747	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.119972781988	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778395	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721224_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152778259
ES.1595.62	chr1	-	6555	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-95	-2	intron_retention	FALSE	canonical	3	48	junction_21	91.4420739734286	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778492	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.63	chr1	-	4169	11	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-3635	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.3417954216098	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152728391	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721224_152721869_152722015_152724484_152724768_152725625_152725746_152728348
ES.1595.64	chr1	-	5636	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-115	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.6214191492516	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778512	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152714251_152714517_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.65	chr1	-	6031	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-127	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	101.422267626544	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATCGGTGTGTAGAGGA	NA	False	NA	-6	True	ATTAAA	-16	NA	152778524	152712748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.69	chr1	-	3254	2	NIC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	8546	-4	intron_retention	FALSE	canonical	3	282	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	False	NA	-8	True	ATTAAA	-14	NA	152716125	152712750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715932_152716052
ES.1595.7	chr1	-	5918	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-150	-1	-126	1	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGTGTGTAGAGGATTTA	NA	False	NA	-2	True	ATTAAA	-20	NA	152778523	152712744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.71	chr1	-	5842	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-125	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	80.4865589263229	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	False	NA	-8	True	ATTAAA	-14	NA	152778522	152712750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.72	chr1	-	6166	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-458	-4	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	86.3594735838863	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	False	NA	-8	True	ATTAAA	-14	NA	152778855	152712750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.73	chr1	-	5977	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-108	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	100.073545733953	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	False	NA	-8	True	ATTAAA	-14	NA	152778505	152712750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.74	chr1	-	5655	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	106.210972414139	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGATCGGTGTGTAGA	NA	False	NA	-9	True	ATTAAA	-13	NA	152778411	152712751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152743434_152743519_152744002_152744121_152746510_152746543_152778259
ES.1595.75	chr1	-	6136	25	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.181786342692	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGATCGGTGTGTAGA	NA	False	NA	-9	True	ATTAAA	-13	NA	152778395	152712751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736580_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.77	chr1	-	6034	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-126	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.674614691806	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCAGATCGGTGTGTAG	NA	False	NA	-10	True	ATTAAA	-12	NA	152778523	152712752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720150_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746539_152753791_152753929_152778259
ES.1595.78	chr1	-	5723	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	95.0538342464873	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCAGATCGGTGTGTAG	NA	False	NA	-10	True	ATTAAA	-12	NA	152778404	152712752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.8	chr1	-	5975	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-124	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	100.822534013182	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGTGTGTAGAGGATTTA	NA	False	NA	-2	True	ATTAAA	-20	NA	152778521	152712744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.81	chr1	-	5950	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-111	-101	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTGGGGTTGTTTTT	NA	False	NA	1	True	AATAAA	-25	NA	152778508	152712847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.82	chr1	-	5818	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	-118	-1772	-118	-102	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTGGGGTTGTTTT	NA	False	NA	0	True	AATAAA	-24	NA	152778515	152712848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.83	chr1	-	6144	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	-480	103	-456	-102	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTGGGGTTGTTTT	NA	False	NA	0	True	AATAAA	-24	NA	152778853	152712848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.84	chr1	-	6074	21	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-1	-102	intron_retention	FALSE	canonical	3	176	junction_5	38.5170092296897	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTGGGGTTGTTTT	NA	False	NA	0	True	AATAAA	-24	NA	152778398	152712848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.85	chr1	-	5672	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-123	-103	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGATTTGGGGTTGTTT	NA	False	NA	-1	True	AATAAA	-23	NA	152778520	152712849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.86	chr1	-	6235	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-14	-104	intron_retention	FALSE	canonical	3	60	junction_6	71.0603844015251	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGATTTGGGGTTGTT	NA	False	NA	-2	True	AATAAA	-22	NA	152778411	152712850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.87	chr1	-	5732	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-1	-104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	94.0525613554499	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGATTTGGGGTTGTT	NA	False	NA	-2	True	AATAAA	-22	NA	152778398	152712850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152776198_152776244_152778259
ES.1595.88	chr1	-	5622	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-107	-104	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	69.9673393193465	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGATTTGGGGTTGTT	NA	False	NA	-2	True	AATAAA	-22	NA	152778504	152712850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715899_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.89	chr1	-	5479	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	3	-104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.5408808696852	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGATTTGGGGTTGTT	NA	False	NA	-2	True	AATAAA	-22	NA	152778394	152712850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721178_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.90	chr1	-	5800	24	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-1	-106	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_19	93.9386639770444	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGATTTGGGGTTG	NA	False	NA	-4	True	AATAAA	-20	NA	152778398	152712852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.91	chr1	-	5826	23	NNC	ENSMUSG00000042772.16	novel	5767	22	NA	NA	-5	-106	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	82.062715384018	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGATTTGGGGTTG	NA	False	NA	-4	True	AATAAA	-20	NA	152778402	152712852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.92	chr1	-	5681	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	2	-106	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGATTTGGGGTTG	NA	False	NA	-4	True	AATAAA	-20	NA	152778395	152712852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.93	chr1	-	5454	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	-1	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	87.426237130369	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTTGATTTGGGGTT	NA	False	NA	-5	True	AATAAA	-19	NA	152778398	152712853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731752_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.94	chr1	-	6225	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-19	-107	intron_retention	FALSE	canonical	0	0	junction_9	102.413448642304	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTTGATTTGGGGTT	NA	False	NA	-5	True	AATAAA	-19	NA	152778416	152712853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152722015_152724484_152724619_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
ES.1595.96	chr1	-	5916	21	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	2	-108	intron_retention	FALSE	canonical	0	0	junction_8	69.9660453362915	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGATTTGATTTGGGGT	NA	False	NA	-6	True	AATAAA	-18	NA	152778395	152712854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724619_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.1595.98	chr1	-	5644	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	2	-109	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	80.4197279566905	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATTTGATTTGGGG	NA	False	NA	-7	True	AATAAA	-17	NA	152778395	152712855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ES.15950.1	chr17	-	2824	1	Intergenic	novelGene_13290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCCTAAGCATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88919162	88916338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88916300_88919200
ES.15950.2	chr17	-	3111	5	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	21.0119013894507	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATTTTTCTAACTT	NA	False	NA	NA	False	NA	NA	NA	88932939	88918003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88919124_88922564_88924018_88928723_88928829_88930105_88930383_88932783
ES.15950.3	chr17	-	489	3	Antisense	novelGene_ENSMUSG00000033855.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCGGCCTCCTTTGAT	NA	False	NA	NA	False	TATAAA	-10	NA	88932939	88923789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_-_88924018_88928723_88928829_88932783
ES.15951.1	chr17	-	182	1	Intergenic	novelGene_13291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTCATCTCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	88949879	88949697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_88949700_88949900
ES.15952.1	chr17	+	1514	8	NIC	ENSMUSG00000024154.12	novel	1621	9	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.832993127835043	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCACACATTTACAACA	NA	False	NA	NA	False	AATAAA	-15	NA	88976105	89022576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_88976160_88978621_88978724_88978926_88979048_88997414_88997471_89001530_89002097_89018868_89019127_89019783_89019874_89022309
ES.15953.1	chr17	-	2603	10	NNC	ENSMUSG00000032937.6	novel	2360	10	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.496903994999953	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGCTTGTTTTATGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	89508118	89292382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_89293823_89295851_89296038_89309138_89309214_89309322_89309392_89316694_89316773_89318442_89318515_89352498_89352574_89354057_89354133_89356155_89356459_89507888
ES.15954.1	chr17	-	1991	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	7	-10	7	10	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGATGGGTGTGTGAC	NA	False	NA	NA	False	AATAAA	-44	NA	90217870	90215879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_90215900_90217900
ES.15954.2	chr17	-	1906	2	Genic_Genomic	ENSMUSG00000066878.6	novel	1988	1	NA	NA	7	10	multi-exon	FALSE	non_canonical	0	0	junction_1	0	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGATGGGTGTGTGAC	NA	False	NA	NA	False	AATAAA	-44	NA	90217870	90215879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_-_90217389_90217473
ES.15954.3	chr17	-	1883	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	7	98	7	-98	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTGTCCTCTGAATT	NA	False	NA	NA	False	TATAAA	-14	NA	90217870	90215987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_90216000_90217900
ES.15955.1	chr17	+	177	1	Intergenic	novelGene_13292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCCTTAAAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	90435701	90435878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_90435700_90435900
ES.15956.1	chr17	+	1334	1	FSM	ENSMUSG00000043346.10	ENSMUST00000057074.10	747	1	-36	-551	-36	551	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCTTTTTAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	91544202	91545536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_91544200_91545500
ES.15957.1	chr17	+	176	1	Intergenic	novelGene_13293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92619506	92619682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_92619500_92619700
ES.15958.1	chr17	+	206	1	Intergenic	novelGene_13294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACATGACTTCACCTCA	NA	False	NA	NA	False	NA	NA	NA	92969123	92969329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_92969100_92969300
ES.15959.1	chr17	-	195	1	Intergenic	novelGene_13295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATTAGAAACTCTT	NA	False	NA	NA	False	NA	NA	NA	93174580	93174385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_93174400_93174600
ES.1596.1	chr1	+	1098	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	957	False	NA	NA	False	NA	NA	NA	152792856	152793954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_152792900_152794000
ES.15960.1	chr17	+	2082	3	NNC	ENSMUSG00000024256.8	novel	2011	3	NA	NA	255	269	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	1	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTAGTTTGTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	93509758	93513260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_93509847_93510212_93510312_93511365
ES.15960.2	chr17	+	464	3	NNC	ENSMUSG00000024256.8	novel	3117	5	NA	NA	299	-1305	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	1	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATATTGTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	93509802	93511686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_93509847_93510212_93510312_93511365
ES.15961.1	chr17	+	177	1	Intergenic	novelGene_13296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	93530670	93530847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_93530700_93530800
ES.15962.1	chr17	+	4250	1	Intergenic	novelGene_13297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTTCAGAATTCAT	NA	False	NA	NA	False	AAAACA	-21	NA	93596929	93601179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_93596900_93601200
ES.15963.1	chr17	+	970	1	Intergenic	novelGene_13298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGGTCTCAAAACTT	NA	False	NA	NA	False	NA	NA	NA	93648962	93649932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_93649000_93649900
ES.15964.1	chr17	-	182	1	Intergenic	novelGene_13299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94393190	94393008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_94393000_94393200
ES.15965.1	chr17	-	2470	1	Intergenic	novelGene_13300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	94606315	94603845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_94603800_94606300
ES.15966.1	chr17	+	414	1	FSM	ENSMUSG00000117476.2	ENSMUST00000234959.2	313	1	-37	-64	-37	64	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCCCAAGAGTAACTC	NA	False	NA	NA	False	AATAAA	-43	NA	94915575	94915989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_94915600_94916000
ES.15967.1	chr17	+	159	1	Intergenic	novelGene_13301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	94941371	94941530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94941400_94941500
ES.15968.11	chr17	+	4726	1	Intergenic	novelGene_13306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGGAGAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	94990611	94995337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94990600_94995300
ES.15968.12	chr17	+	2508	2	Intergenic	novelGene_13307	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATATTTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	94990701	94995328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992351_94994469
ES.15968.13	chr17	+	3764	2	Intergenic	novelGene_13308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATATTTTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	94990701	94995329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94991872_94992735
ES.15968.14	chr17	+	2398	2	Intergenic	novelGene_13309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTTTGGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	94990881	94995332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94991836_94993888
ES.15968.15	chr17	+	4158	2	Intergenic	novelGene_13310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94991067	94995295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94991351_94991420
ES.15968.16	chr17	+	1828	2	Intergenic	novelGene_13311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATATTTTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	94991368	94995329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992351_94994483
ES.15968.17	chr17	+	3795	2	Intergenic	novelGene_13312	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGGAGAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	94991499	94995337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992674_94992716
ES.15968.18	chr17	+	3118	2	Intergenic	novelGene_13313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992137	94995293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992660_94992697
ES.15968.2	chr17	+	5164	2	Intergenic	novelGene_13302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGGAGAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	94990129	94995337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992660_94992703
ES.15968.6	chr17	+	5121	2	Intergenic	novelGene_13303	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990130	94995296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992674_94992718
ES.15968.7	chr17	+	5000	2	Intergenic	novelGene_13304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTTCGGTTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	94990131	94995175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992660_94992703
ES.15968.8	chr17	+	5019	3	Intergenic	novelGene_13305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGCAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94990131	94995290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_94992660_94992703_94994440_94994535
ES.15969.1	chr17	+	3057	9	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	95033566	95056935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95034824_95040516_95040608_95040973_95041082_95042763_95042935_95046877_95046950_95047811_95048186_95051361_95051423_95055044_95055848_95056815
ES.15969.2	chr17	+	2995	8	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	95033566	95056936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95034824_95040516_95040608_95040973_95041082_95042763_95042935_95046877_95046950_95047811_95048186_95055046_95055848_95056815
ES.15969.3	chr17	+	3007	9	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	95033566	95056936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95034824_95040516_95040608_95040973_95041082_95042763_95042935_95046877_95046950_95047811_95048186_95051361_95051423_95055044_95055848_95056866
ES.15969.4	chr17	+	2961	8	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAGCTCAAAACTAGCT	NA	False	NA	NA	False	NA	NA	NA	95033566	95056953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95034824_95040516_95040608_95040973_95041082_95042763_95042935_95046877_95046950_95047811_95048186_95055046_95055848_95056866
ES.15969.5	chr17	+	2710	1	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACTATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95052202	95054912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95052200_95054900
ES.15969.6	chr17	+	3715	2	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	95052202	95056936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95055848_95056866
ES.15969.7	chr17	+	3754	2	Antisense	novelGene_ENSMUSG00000055660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCAAACTCTCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95052202	95056924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95055848_95056815
ES.1597.1	chr1	-	136	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAACAAAAAAAA	7186	False	NA	NA	False	NA	NA	NA	152803427	152803291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152803300_152803400
ES.15970.1	chr17	-	7139	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTGAGTTTTTAATTT	NA	False	NA	67	True	AATAAA	-21	NA	95057469	95030018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.10	chr17	-	1877	1	ISM	ENSMUSG00000055660.10	ENSMUST00000234990.2	6640	9	22582	2844	22582	1651	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTGTCTTGTTTGCAT	NA	False	NA	NA	False	AATGAA	-42	NA	95034738	95032861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_95032900_95034700
ES.15970.11	chr17	-	3305	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-39	1165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.0338382634989	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATCTGTTTGTTCTAG	NA	False	NA	0	True	NA	NA	NA	95057408	95033347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95057257
ES.15970.12	chr17	-	3728	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-15	-1153	-15	1153	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTAACTTATATAATC	NA	False	NA	-12	True	NA	NA	NA	95057462	95033359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ES.15970.13	chr17	-	3795	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-19	1153	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTAACTTATATAATC	NA	False	NA	-12	True	NA	NA	NA	95057466	95033359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.14	chr17	-	3256	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	389	1152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.9991071314684	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTAACTTATATAAT	NA	False	NA	-13	True	NA	NA	NA	95056931	95033360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046945_95047809_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.15	chr17	-	3741	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-21	1148	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAATTTGTAACTTATA	NA	False	NA	-17	True	NA	NA	NA	95057468	95033364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
ES.15970.16	chr17	-	3104	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	2	483	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGATTTATCTACTGT	NA	False	NA	NA	False	NA	NA	NA	95057445	95034029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.17	chr17	-	2043	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	36.017356926904	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATAGTGAGTCTCTTCC	NA	False	NA	NA	False	AATATA	-19	NA	95057456	95034509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055636_95055846_95056813
ES.15970.18	chr17	-	2582	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-21	-1	-21	1	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTATAGTGAGTCTCTT	NA	False	NA	NA	False	AATATA	-17	NA	95057468	95034511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ES.15970.19	chr17	-	2571	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTATAGTGAGTCTC	NA	False	NA	NA	False	AATATA	-15	NA	95057447	95034513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
ES.15970.2	chr17	-	7016	8	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	-16	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	35.9500787657733	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTTTTGAGTTTTTAA	NA	False	NA	64	True	AATAAA	-18	NA	95057463	95030021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056864
ES.15970.20	chr17	-	2370	8	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	35.9500787657733	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTATAGTGAGTCTC	NA	False	NA	NA	False	AATATA	-15	NA	95057309	95034513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056864
ES.15970.21	chr17	-	2641	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTATAGTGAGTCTC	NA	False	NA	NA	False	AATATA	-15	NA	95057466	95034513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.22	chr17	-	2541	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	29.7108460835433	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057462	95034516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042846_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.23	chr17	-	1950	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.7584347098855	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCCTTTATAGTGAGT	NA	False	NA	NA	False	TATAAA	-43	NA	95057421	95034516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055636_95055846_95056864
ES.15970.24	chr17	-	3423	9	NNC	ENSMUSG00000055660.10	novel	2224	2	NA	NA	31	-4293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.460365198345	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATGTTTAAAGATTACT	NA	False	NA	NA	False	AATAAA	-29	NA	95057416	95038805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95039948_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.25	chr17	-	4021	8	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	2	-4293	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	16.2606323144368	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATGTTTAAAGATTACT	NA	False	NA	NA	False	AATAAA	-29	NA	95057445	95038805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.26	chr17	-	3400	7	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	317	-4297	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38.080689186107	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAATGTTTAAAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	95057003	95038809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95040609_95040974_95041082_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.27	chr17	-	4950	3	NNC	ENSMUSG00000055660.10	novel	2224	2	NA	NA	2	2650	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTGTGATAGACTAC	NA	False	NA	NA	False	AATAAA	-21	NA	95057445	95051476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95052185_95052235_95055846_95056813
ES.15970.28	chr17	-	2545	2	FSM	ENSMUSG00000055660.10	ENSMUST00000234593.2	2224	2	-97	-224	-19	224	multi-exon	FALSE	canonical	3	30	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGTAAAGTTTTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	95057466	95053902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95055846_95056864
ES.15970.29	chr17	-	2396	2	ISM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	-21	19592	-21	22	5prime_fragment	FALSE	canonical	3	86	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAATCTACCTCATCTG	NA	False	NA	NA	False	GATAAA	-26	NA	95057468	95054104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_95055846_95056813
ES.15970.3	chr17	-	7048	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	1	-4489	1	-6	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTTTGAGTTTTT	NA	False	NA	62	True	AATAAA	-16	NA	95057446	95030023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ES.15970.30	chr17	-	2338	2	FSM	ENSMUSG00000055660.10	ENSMUST00000234593.2	2224	2	-94	-20	-16	20	multi-exon	FALSE	canonical	3	30	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGAATCTACCTCATC	NA	False	NA	NA	False	TATAAA	-44	NA	95057463	95054106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95055846_95056864
ES.15970.4	chr17	-	7064	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	-9	-12	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACATGCAGTTTTTGA	NA	False	NA	56	True	AATAAA	-10	NA	95057456	95030029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
ES.15970.5	chr17	-	6895	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	10	-69	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	34.935431513007	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	-1	True	AATAAA	-15	NA	95057437	95030086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042846_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
ES.15970.6	chr17	-	6919	9	NNC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	37	-69	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	29.7108460835433	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGAATTAAAGACTTG	NA	False	NA	-1	True	AATAAA	-15	NA	95057410	95030086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042846_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
ES.15970.8	chr17	-	6556	8	NNC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	-15	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.4031880706231	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGATGAATTAAAGACTT	NA	False	NA	-2	True	AATAAA	-14	NA	95057462	95030087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95057257
ES.15970.9	chr17	-	5224	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	26	-1817	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTTTACTAGAGAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	95057421	95031834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
ES.15971.1	chr17	+	6466	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-29	16826	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	75.4114639089369	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTATGATTAGATTT	NA	False	NA	NA	False	NA	NA	NA	95057498	95099386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95093195
ES.15971.10	chr17	+	6734	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-7	17006	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	74.7980614722066	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGAGTCTCTTTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	95057520	95099566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092951_95093195
ES.15971.11	chr17	+	2308	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-7	12595	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	71.1244507887407	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057520	95095155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95093195
ES.15971.12	chr17	+	6007	9	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_3	51.3430557621963	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTCCCCTCCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	95057521	95082561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95064568_95067751_95069033_95069889_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.13	chr17	+	383	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	1	19017	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	77.6831169989121	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95057528	95101577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95101454
ES.15971.14	chr17	+	1120	9	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	51.4192327830745	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057533	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.15	chr17	+	3313	7	Fusion	ENSMUSG00000095193.3_ENSMUSG00000098090.9	novel	1572	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	66.1379030679248	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	95057539	95185749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95181413_95181541_95181729_95181791_95182953
ES.15971.16	chr17	+	1174	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	52.9339210714642	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057542	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ES.15971.17	chr17	+	3993	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	45006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.1544747242544	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTATCTTTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	95057542	95127566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95123804
ES.15971.18	chr17	+	354	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	19017	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95057542	95101577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
ES.15971.19	chr17	+	6617	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	3	17006	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	79.5040180675725	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGAGTCTCTTTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	95057542	95099566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95093195
ES.15971.2	chr17	+	492	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-28	19017	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95057499	95101577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
ES.15971.20	chr17	+	1260	10	FSM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	15	0	3	0	multi-exon	FALSE	canonical	3	41	junction_3	42.4223328093547	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057542	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.21	chr17	+	621	6	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	19017	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	82.110657042798	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95057543	95101577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95060130_95060304_95062638_95062734_95063861_95063952_95092912_95092936_95101454
ES.15971.22	chr17	+	9165	8	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	65	junction_4	40.7971587646163	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057543	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95062638_95062734_95063861_95069033_95069889_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.23	chr17	+	1337	11	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	55.3284736821829	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTGGGTGTCCCCTC	NA	False	NA	NA	False	AATAAA	-10	NA	95057543	95082556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95067060_95067119_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ES.15971.24	chr17	+	4051	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	45005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.5905727244398	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTTATCTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	95057543	95127565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95122088_95122172_95123804
ES.15971.25	chr17	+	2450	3	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	12595	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_1	25	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057543	95095155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912
ES.15971.26	chr17	+	1280	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	48.1350979465191	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057543	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ES.15971.27	chr17	+	3968	3	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	45005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTTATCTTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	95057543	95127565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95123804
ES.15971.28	chr17	+	2300	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	12595	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	74.7980614722066	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057543	95095155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092951_95093195
ES.15971.29	chr17	+	4102	8	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	3	intron_retention	FALSE	canonical	3	41	junction_2	32.4848473310627	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	95057543	95082563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.3	chr17	+	1256	10	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_6	46.65343727826	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057504	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.30	chr17	+	2545	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	12595	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	28.1108915230774	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057543	95095155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912
ES.15971.31	chr17	+	2205	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	4	12595	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	79.5040180675725	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGGACACTTCATAC	NA	False	NA	NA	False	NA	NA	NA	95057543	95095155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95063861_95063952_95092912_95092951_95093195
ES.15971.32	chr17	+	4910	7	Fusion	ENSMUSG00000095193.3_ENSMUSG00000098090.9	novel	1572	4	NA	NA	4	1601	intron_retention	FALSE	canonical	0	0	junction_4	66.1379030679248	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATGTCTCTGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	95057543	95187350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95181413_95181541_95181729_95181791_95182953
ES.15971.33	chr17	+	1315	11	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	52.2049806053024	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTGGGTGTCCCCTC	NA	False	NA	NA	False	AATAAA	-10	NA	95057544	95082556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95067060_95067119_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.34	chr17	+	4351	10	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-6	0	intron_retention	FALSE	canonical	2	9	junction_1	51.4229616771955	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTGTCCCCTCCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	95057559	95082560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95060130_95060304_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.35	chr17	+	6743	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	0	16815	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	28.1108915230774	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAGATTTAAAGTA	NA	False	NA	NA	False	NA	NA	NA	95057565	95099375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912
ES.15971.36	chr17	+	2907	8	NNC	ENSMUSG00000098090.9	novel	1344	12	NA	NA	5251	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	30.2391825826246	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTCCCCTCCCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	95065173	95082562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95067119_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.37	chr17	+	2605	8	NNC	ENSMUSG00000098090.9	novel	1344	12	NA	NA	5506	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.8610606533734	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95065428	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95067119_95068925_95069033_95069889_95070049_95071199_95071311_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.38	chr17	+	5474	6	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	7382	0	intron_retention	FALSE	canonical	1	1	junction_1	37.725323060247	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTGTCCCCTCCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	95067304	95082560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95069033_95069928_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.39	chr17	+	1540	7	ISM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	10815	0	8420	0	3prime_fragment	FALSE	canonical	3	61	junction_3	18.4360757453664	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95068342	95082557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_+_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.4	chr17	+	6706	4	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-19	17004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1280999384984	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTGAGTCTCTTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	95057508	95099564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95093195
ES.15971.40	chr17	+	4838	5	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	8917	3	intron_retention	FALSE	canonical	3	65	junction_1	19.3955536141663	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	95068839	95082563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95070049_95071199_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.41	chr17	+	7993	4	NIC	ENSMUSG00000098090.9	novel	969	7	NA	NA	9946	1	intron_retention	FALSE	canonical	3	65	junction_1	20.9814733091416	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTCCCCTCCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	95069868	95082561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95070049_95071199_95078667_95079284_95079389_95082319
ES.15971.42	chr17	+	2260	1	Intergenic	novelGene_13314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCATGGTTCATTTTG	NA	False	NA	10	True	AATAAA	-15	NA	95099317	95101577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_95099300_95101600
ES.15971.43	chr17	+	4160	2	Antisense	novelGene_ENSMUSG00000066057.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATCTGGTTTGAATT	NA	False	NA	NA	False	NA	NA	NA	95112383	95116611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr17_+_95112669_95112736
ES.15971.44	chr17	+	7831	1	Intergenic	novelGene_13316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAGAAAAACAAGG	NA	False	NA	NA	False	NA	NA	NA	95132224	95140055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_95132200_95140100
ES.15971.45	chr17	+	202	1	Intergenic	novelGene_13318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATATATATATAG	NA	False	NA	NA	False	NA	NA	NA	95162345	95162547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_+_95162300_95162500
ES.15971.46	chr17	+	5054	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-317	-1658	-317	1658	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCACACATTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	95172028	95187407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ES.15971.47	chr17	+	3396	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-314	-3	-314	3	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGTCATGGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	95172031	95185752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ES.15971.48	chr17	+	5303	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-17	-2207	-17	2207	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAATTTAAAAAATTT	NA	False	NA	NA	False	AATAAA	-29	NA	95172328	95187956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ES.15971.49	chr17	+	5122	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	-13	-2030	-13	2030	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGAGACAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	95172332	95187779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ES.15971.5	chr17	+	6731	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-19	17006	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	71.1244507887407	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGAGTCTCTTTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	95057508	95099566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95093195
ES.15971.6	chr17	+	6539	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	16824	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	71.1244507887407	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAAGTATGATTAGAT	NA	False	NA	NA	False	NA	NA	NA	95057518	95099384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95093195
ES.15971.7	chr17	+	1183	9	NIC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	47.0790558528949	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCCCCTCCCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	95057518	95082563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr17_+_95057661_95062638_95062734_95063861_95063952_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ES.15971.8	chr17	+	3696	1	Genic_Genomic	ENSMUSG00000098090.9	novel	NA	NA	NA	NA	-9	-3230	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTAAAATATAACTG	NA	False	NA	NA	False	NA	NA	NA	95057518	95061214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr17_+_95057500_95061200
ES.15971.9	chr17	+	6551	5	NNC	ENSMUSG00000098090.9	novel	1275	10	NA	NA	-7	16823	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	74.7980614722066	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTAAAGTATGATTAGA	NA	False	NA	NA	False	NA	NA	NA	95057520	95099383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092951_95093195
ES.15972.1	chr17	-	1963	5	NNC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.7972866790289	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTCATTTGGTA	NA	False	NA	NA	False	NA	NA	NA	95142200	95067371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95069006_95126322_95126373_95127763_95127825_95128042_95128180_95142119
ES.15972.10	chr17	-	4393	3	ISM	ENSMUSG00000066057.8	ENSMUST00000182639.2	1853	4	-17	54794	-17	18320	5prime_fragment	FALSE	canonical	3	15	junction_2	22	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTTCT	NA	False	NA	0	True	AATAAA	-22	NA	95142244	95122165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_95126373_95127763_95127825_95142119
ES.15972.13	chr17	-	4531	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	10	18319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.6891789161883	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGCTATCATCTTTC	NA	False	NA	-1	True	AATAAA	-21	NA	95142216	95122166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128210_95142119
ES.15972.14	chr17	-	4501	4	NNC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	0	18319	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGCTATCATCTTTC	NA	False	NA	-1	True	AATAAA	-21	NA	95142226	95122166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15972.15	chr17	-	4597	5	NNC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	10	18319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.5575331360443	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGCTATCATCTTTC	NA	False	NA	-1	True	AATAAA	-21	NA	95142216	95122166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95129865_95129972_95142119
ES.15972.16	chr17	-	4439	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	382	18269	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	22.8958996814325	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGACTGGTTATTTGA	NA	False	NA	-51	True	AATGAA	-14	NA	95141844	95122216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95141749
ES.15972.17	chr17	-	4257	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	5	18080	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGAGTTGTCTAGCTTC	NA	False	NA	NA	False	NA	NA	NA	95142221	95122405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15972.18	chr17	-	4319	1	Intergenic	novelGene_13315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTTCCCTGAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	95135132	95130813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_95130800_95135100
ES.15972.19	chr17	-	199	1	Intergenic	novelGene_13317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAAAGTGCACAACCT	NA	False	NA	NA	False	NA	NA	NA	95137867	95137668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr17_-_95137700_95137900
ES.15972.2	chr17	-	5838	1	FSM	ENSMUSG00000117499.2	ENSMUST00000234240.2	1323	1	-1266	-3249	-1266	3249	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCAGAGTCTAATATGT	NA	False	NA	NA	False	AGTAAA	-12	NA	95124757	95118919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr17_-_95118900_95124800
ES.15972.3	chr17	-	7452	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	5	21275	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTGATTACTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	95142221	95119210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15972.4	chr17	-	7329	3	ISM	ENSMUSG00000066057.8	ENSMUST00000234189.2	1909	5	1	51839	1	21275	5prime_fragment	FALSE	canonical	3	15	junction_2	22	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTGATTACTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	95142225	95119210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr17_-_95126373_95127763_95127825_95142119
ES.15972.5	chr17	-	5407	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	13	19238	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTTTGATACAATGTG	NA	False	NA	NA	False	AATAAA	-29	NA	95142213	95121247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15972.6	chr17	-	5266	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	47	19091	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.6891789161883	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCTTGCTATGCTCAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	95142179	95121394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128210_95142119
ES.15972.7	chr17	-	5272	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	1	19091	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCTTGCTATGCTCAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	95142225	95121394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15972.8	chr17	-	5069	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	14	18885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.6891789161883	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATGTGATGAAAACAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	95142212	95121600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128186_95142119
ES.15972.9	chr17	-	4764	4	NNC	ENSMUSG00000066057.8	novel	1853	4	NA	NA	10	18592	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGTTCTGTTTTTTTT	NA	False	NA	NA	False	AATGAA	-6	NA	95142216	95121893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
ES.15973.1	chr18	+	4092	2	Intergenic	novelGene_13319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTTCTTGGTATTTT	8	False	NA	NA	False	AGTAAA	-20	NA	3000101	3013942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3010014
ES.15973.10	chr18	+	3212	1	Intergenic	novelGene_13326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTGCTGTCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	3022478	3025690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3022500_3025700
ES.15973.2	chr18	+	4444	2	Intergenic	novelGene_13320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGGAAATTCGAGGTCC	11	False	NA	NA	False	NA	NA	NA	3000104	3014297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3010014
ES.15973.3	chr18	+	4500	3	Intergenic	novelGene_13323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGGAAATTCGAGGTCC	17	False	NA	NA	False	NA	NA	NA	3000110	3014297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3001024_3001087_3010014
ES.15973.4	chr18	+	3313	2	Intergenic	novelGene_13321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTGGTGCCCTGACTT	17	False	NA	NA	False	NA	NA	NA	3000110	3013172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3010014
ES.15973.5	chr18	+	4143	3	Intergenic	novelGene_13322	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTTTTCTTGGTATT	17	False	NA	NA	False	AGTAAA	-18	NA	3000110	3013940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3001024_3001087_3010014
ES.15973.6	chr18	+	7027	2	Antisense	novelGene_ENSMUSG00000093774.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	24	False	NA	NA	False	NA	NA	NA	3000117	3051779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3000266_3044900
ES.15973.7	chr18	+	3217	3	Intergenic	novelGene_13324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATGTCTGTGTTGTCC	35	False	NA	NA	False	ACTAAA	-16	NA	3000199	3013103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3000266_3001024_3001087_3010014
ES.15973.8	chr18	+	5033	1	Intergenic	novelGene_13325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	3427	False	NA	NA	False	NA	NA	NA	3009234	3014267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3009200_3014300
ES.15973.9	chr18	+	4397	4	Antisense	novelGene_ENSMUSG00000093774.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAGCAAGTTGCATGGC	NA	False	NA	NA	False	NA	NA	NA	3019786	3030042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3022023_3027384_3028867_3029265_3029869_3029966
ES.15974.1	chr18	+	3299	1	Intergenic	novelGene_13327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3076811	3080110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3076800_3080100
ES.15975.1	chr18	-	178	1	Intergenic	novelGene_13328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATGCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	3104787	3104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3104600_3104800
ES.15976.1	chr18	+	2524	3	Antisense	novelGene_ENSMUSG00000117464.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCGTGGTGGCGCACAC	NA	False	NA	NA	False	TTTAAA	-39	NA	3149051	3181504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3150826_3180454_3180637_3180936
ES.15976.2	chr18	+	6593	2	Intergenic	novelGene_13329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGTGACTCTTGAAACC	NA	False	NA	NA	False	AATAAA	-11	NA	3155720	3163056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3161787_3162529
ES.15977.1	chr18	+	2918	22	Fusion	ENSMUSG00000097746.3_ENSMUSG00000024231.16	novel	397	2	NA	NA	-5	19	multi-exon	FALSE	canonical	0	0	junction_1	276.449451653874	786	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	-2	True	NA	91	True	NA	NA	NA	3336732	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_3336792_3365926_3366097_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.10	chr18	+	2993	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-5	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	339.036958098842	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	-40	True	NA	91	True	NA	NA	NA	3382982	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426729_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.12	chr18	+	3800	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	249.061920011872	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATACCAATTGTCAAGAAA	-35	True	NA	2	True	ATTAAA	-14	NA	3382987	3436374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.13	chr18	+	3392	8	ISM	ENSMUSG00000024231.16	ENSMUST00000025073.12	3727	20	0	14261	0	816	intron_retention	FALSE	canonical	3	200	junction_1	267.178607233561	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	-35	True	NA	NA	False	NA	NA	NA	3382987	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531
ES.15977.16	chr18	+	2678	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	11	-166	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGGTTGGGTACCATG	-24	True	NA	-34	True	ATTAAA	-29	NA	3382998	3435219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.17	chr18	+	3469	7	ISM	ENSMUSG00000024231.16	ENSMUST00000025073.12	3727	20	11	14261	11	816	intron_retention	FALSE	canonical	3	200	junction_1	288.498074324403	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	-24	True	NA	NA	False	NA	NA	NA	3382998	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346
ES.15977.18	chr18	+	1804	9	ISM	ENSMUSG00000024231.16	ENSMUST00000025073.12	3727	20	28	14261	28	816	5prime_fragment	FALSE	canonical	3	200	junction_1	249.936210611828	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	-7	True	NA	NA	False	NA	NA	NA	3383015	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202
ES.15977.19	chr18	+	2979	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	274.618159972803	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-3	True	NA	72	True	ATTAAA	-28	NA	3383019	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383173_3383780_3383937_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.2	chr18	+	5644	1	FSM	ENSMUSG00000097746.3	ENSMUST00000234647.2	6745	1	1123	-22	1123	22	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTGACAGCTCATGCT	2	True	NA	NA	False	NA	NA	NA	3337860	3343504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3337900_3343500
ES.15977.21	chr18	+	2811	21	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	46	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	252.994367526236	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	11	True	NA	72	True	ATTAAA	-28	NA	3383033	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434117_3434847
ES.15977.22	chr18	+	2934	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	271.134811796273	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	24	True	NA	72	True	ATTAAA	-28	NA	3383046	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383173_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.23	chr18	+	2937	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	-59	950	-52	42	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGAATATCAGGTTGG	150	False	NA	114	True	NA	NA	NA	3383172	3435427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.24	chr18	+	3895	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	-12	-55	-5	55	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTTCTTAACATTTC	197	False	NA	60	True	AAGAAA	-39	NA	3383219	3436432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.25	chr18	+	2725	20	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	211.263918389526	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-18	True	NA	72	True	ATTAAA	-28	NA	3383225	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3434843
ES.15977.26	chr18	+	3967	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.943176346869	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAATTGTCAAGAAATG	-17	True	NA	4	True	ATTAAA	-16	NA	3383226	3436376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383533_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.28	chr18	+	2995	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	274.76055128824	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-15	True	NA	72	True	ATTAAA	-28	NA	3383228	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3383780_3383937_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.29	chr18	+	2996	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	19	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	269.410879925481	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	-15	True	NA	91	True	NA	NA	NA	3383228	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.3	chr18	+	191	1	Intergenic	novelGene_13330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9364	False	NA	NA	False	NA	NA	NA	3347576	3347767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3347600_3347800
ES.15977.30	chr18	+	4338	19	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	22	intron_retention	FALSE	canonical	3	782	junction_1	84.3848473906056	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAATGCCTTTTTCTATG	-15	True	NA	94	True	NA	NA	NA	3383228	3435407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.31	chr18	+	3582	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	-1	247	-1	-244	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGTGGTTCATATTA	-13	True	NA	NA	False	AATAAA	-17	NA	3383230	3436130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.33	chr18	+	7602	6	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	4	816	intron_retention	FALSE	canonical	3	782	junction_1	105.429787062291	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	-8	True	NA	NA	False	NA	NA	NA	3383235	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3418647_3419346_3419444_3419531
ES.15977.34	chr18	+	2772	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	5	1051	5	-59	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATAACCTAATAATTGT	-7	True	NA	13	True	AATAAA	-21	NA	3383236	3435326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.36	chr18	+	3190	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.4234084722	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-7	True	NA	72	True	ATTAAA	-28	NA	3383236	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3383780_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.37	chr18	+	4350	6	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	5	787	intron_retention	FALSE	canonical	3	782	junction_1	117.559516841471	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	3383236	3422084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3418647_3419346
ES.15977.39	chr18	+	5157	20	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	0	intron_retention	FALSE	canonical	3	782	junction_1	82.7264624532422	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-4	True	NA	72	True	ATTAAA	-28	NA	3383239	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.4	chr18	+	3024	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-1716	25	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	249.87385479609	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTTTCTATGATG	NA	False	NA	97	True	NA	NA	NA	3381271	3435410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3381360_3382931_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.40	chr18	+	3365	8	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	8	14264	8	816	intron_retention	FALSE	canonical	3	782	junction_1	107.55957058528	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	-4	True	NA	NA	False	NA	NA	NA	3383239	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531
ES.15977.41	chr18	+	6045	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	212.628408261925	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	-4	True	NA	5	True	ATTAAA	-17	NA	3383239	3436377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3429483_3429586_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.42	chr18	+	3123	22	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	209	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	266.031795279762	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATTGTGAATTTGAGC	-4	True	NA	NA	False	ATTAAA	-27	NA	3383239	3435594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.43	chr18	+	3958	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	269.410879925481	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	-4	True	NA	5	True	ATTAAA	-17	NA	3383239	3436377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.44	chr18	+	3962	22	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	56	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	266.031795279762	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTCTTAACATTTCC	-4	True	NA	61	True	AAGAAA	-40	NA	3383239	3436433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.45	chr18	+	3746	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	8	-209	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	269.410879925481	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATTGCACCTTTTGT	-4	True	NA	NA	False	ATTAAA	-14	NA	3383239	3436165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.46	chr18	+	1820	9	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	8	14249	8	831	5prime_fragment	FALSE	canonical	3	782	junction_1	103.647765894881	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	-4	True	NA	NA	False	NA	NA	NA	3383239	3422128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202
ES.15977.48	chr18	+	6808	18	NIC	ENSMUSG00000024231.16	novel	2799	21	NA	NA	10	0	intron_retention	FALSE	canonical	3	11	junction_3	220.694907541005	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATACCAATTGTCAAGAAA	-2	True	NA	2	True	ATTAAA	-14	NA	3383241	3436374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3421366_3423468_3423594_3424449_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.49	chr18	+	2935	22	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	10	23	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	266.031795279762	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCCTTTTTCTATGA	-2	True	NA	95	True	NA	NA	NA	3383241	3435408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.5	chr18	+	2995	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-1571	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	250.031671463225	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTGTCAAATAAAAAAAAA	NA	False	NA	65	True	ATTAAA	-21	NA	3381416	3435378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3381508_3382931_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.52	chr18	+	2972	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	274.620414175797	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	1	True	NA	72	True	ATTAAA	-28	NA	3383244	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3384001_3384140_3399834_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.53	chr18	+	2738	20	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-10	19	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	217.329498235569	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	3	True	NA	91	True	NA	NA	NA	3383246	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3433993_3434111_3434843
ES.15977.54	chr18	+	2656	20	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	217.251504175419	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	9	True	NA	72	True	ATTAAA	-28	NA	3383252	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418637_3419583_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.55	chr18	+	7785	16	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	7	junction_2	241.657241195504	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAATTGTCAAGAAATG	10	True	NA	4	True	ATTAAA	-16	NA	3383253	3436376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405686_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3425572_3426094_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.58	chr18	+	2796	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	324.439744020365	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	10	True	NA	72	True	ATTAAA	-28	NA	3383253	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429627_3430911_3431115_3431483_3431586_3433999_3434117_3434851
ES.15977.59	chr18	+	3547	20	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	22	992	-3	0	intron_retention	FALSE	canonical	3	782	junction_1	78.4334854150256	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	10	True	NA	72	True	ATTAAA	-28	NA	3383253	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993
ES.15977.6	chr18	+	3162	22	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-699	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	250.347549801491	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	NA	False	NA	91	True	NA	NA	NA	3382288	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3382521_3382931_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.60	chr18	+	2943	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-3	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	276.590793628749	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	10	True	NA	91	True	NA	NA	NA	3383253	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3385108_3385219_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.61	chr18	+	1446	8	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	334.924054748206	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	11	True	NA	72	True	ATTAAA	-28	NA	3383254	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.62	chr18	+	2769	21	FSM	ENSMUSG00000024231.16	ENSMUST00000080089.11	2799	21	30	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_3	205.086591468092	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	11	True	NA	72	True	ATTAAA	-28	NA	3383254	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.63	chr18	+	2821	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	208.650305535362	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	11	True	NA	72	True	ATTAAA	-28	NA	3383254	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417526_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.65	chr18	+	2883	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	0	-59	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	276.167043340918	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATAACCTAATAATTGT	13	True	NA	13	True	AATAAA	-21	NA	3383256	3435326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399061_3399193_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.66	chr18	+	2793	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.969471713546	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	15	True	NA	72	True	ATTAAA	-28	NA	3383258	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383394_3399845_3399987_3405686_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425517_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431487_3431586_3433993_3434111_3434843
ES.15977.67	chr18	+	3756	21	FSM	ENSMUSG00000024231.16	ENSMUST00000080089.11	2799	21	34	-991	2	-1	multi-exon	FALSE	canonical	3	11	junction_3	205.086591468092	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAATTGTCAAGAAATG	15	True	NA	4	True	ATTAAA	-16	NA	3383258	3436376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.68	chr18	+	3660	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	2	-158	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	212.445263538635	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACTTCTACTGTCTTT	15	True	NA	NA	False	NA	NA	NA	3383258	3436216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405664_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.69	chr18	+	3357	20	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	2	25	intron_retention	FALSE	canonical	3	782	junction_1	82.872929462359	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTTTCTATGATG	15	True	NA	97	True	NA	NA	NA	3383258	3435410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.7	chr18	+	4598	21	NNC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-594	0	intron_retention	FALSE	canonical	0	0	junction_1	256.510521226713	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	NA	False	NA	72	True	ATTAAA	-28	NA	3382393	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3382521_3382931_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.70	chr18	+	4891	19	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	3	0	intron_retention	FALSE	canonical	3	782	junction_1	82.6087760261778	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	16	True	NA	72	True	ATTAAA	-28	NA	3383259	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3421366_3423468_3423594_3424449_3424558_3425511_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.71	chr18	+	3978	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	11	0	intron_retention	FALSE	canonical	2	14	junction_1	349.616881341306	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	2	False	NA	72	True	ATTAAA	-28	NA	3383267	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.72	chr18	+	2630	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	38	1160	13	-168	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGGTTGGGTACCA	4	False	NA	-36	True	ATTAAA	-27	NA	3383269	3435217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.73	chr18	+	4358	20	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	13	0	intron_retention	FALSE	canonical	3	782	junction_1	80.5280357573453	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	4	False	NA	72	True	ATTAAA	-28	NA	3383269	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.74	chr18	+	5862	18	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	13	24	intron_retention	FALSE	non_canonical	0	0	junction_15	228.874604915195	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCCTTTTTCTATGAT	4	False	NA	96	True	NA	NA	NA	3383269	3435409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3421366_3423468_3423594_3424449_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431480_3431586_3433993_3434111_3434843
ES.15977.75	chr18	+	1858	8	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	18	816	intron_retention	FALSE	canonical	3	782	junction_1	104.684170294291	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	9	False	NA	NA	False	NA	NA	NA	3383274	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419643_3421202
ES.15977.78	chr18	+	2908	21	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	136	25	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	202.819494871672	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTTTCTATGATG	181	False	NA	97	True	NA	NA	NA	3383446	3435410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3383660_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.79	chr18	+	4963	17	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	2360	0	intron_retention	FALSE	canonical	2	30	junction_1	225.266569520979	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	2405	False	NA	72	True	ATTAAA	-28	NA	3385670	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3385830_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3425572_3426094_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993
ES.15977.8	chr18	+	3918	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	NA	False	NA	5	True	ATTAAA	-17	NA	3382916	3436377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.80	chr18	+	2846	21	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	2362	19	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	205.853734481549	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	2407	False	NA	91	True	NA	NA	NA	3385672	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3385830_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.81	chr18	+	3766	21	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	2412	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	205.853734481549	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATACCAATTGTCAAGAAA	2457	False	NA	2	True	ATTAAA	-14	NA	3385722	3436374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3385830_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.82	chr18	+	3029	21	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	3003	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.943176346869	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAATGCCTTTTTCT	3048	False	NA	91	True	NA	NA	NA	3386313	3435404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3386654_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.83	chr18	+	6273	19	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	18709	992	18630	0	3prime_fragment	FALSE	canonical	3	793	junction_5	79.6804768752154	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	NA	False	NA	72	True	ATTAAA	-28	NA	3401940	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.84	chr18	+	3965	6	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	21564	14254	21485	826	intron_retention	FALSE	canonical	3	793	junction_5	113.934367071573	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3404795	3422123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531
ES.15977.86	chr18	+	6186	1	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-17956	816	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3415927	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3415900_3422100
ES.15977.87	chr18	+	3445	4	ISM	ENSMUSG00000024231.16	ENSMUST00000234843.2	993	9	33726	-816	-16926	816	intron_retention	FALSE	canonical	3	793	junction_3	43.4587927428578	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3416957	3422113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3417641_3418563_3418647_3419346_3419444_3419531
ES.15977.88	chr18	+	3218	16	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	35330	1	-15322	-1	3prime_fragment	FALSE	canonical	3	793	junction_2	67.6702462107404	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAATTGTCAAGAAATG	NA	False	NA	4	True	ATTAAA	-16	NA	3418561	3436376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.89	chr18	+	2825	13	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	-12589	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	259.623070794737	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	NA	False	NA	5	True	ATTAAA	-17	NA	3421294	3436377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426103_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.9	chr18	+	3651	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-15	-208	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGCACCTTTTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	3382972	3436166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.90	chr18	+	2338	1	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-9560	-4870	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	738	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTACAACTAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	3424323	3426661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3424300_3426700
ES.15977.91	chr18	+	1330	6	NNC	ENSMUSG00000024231.16	novel	397	2	NA	NA	-4700	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	388.451592865829	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	NA	False	NA	72	True	ATTAAA	-28	NA	3429183	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3429483_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.92	chr18	+	2448	5	ISM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	46252	-339	-4400	339	3prime_fragment	FALSE	canonical	3	907	junction_2	56.0758415005963	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTCTCAAACATTCTT	NA	False	NA	NA	False	NA	NA	NA	3429483	3436716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ES.15977.93	chr18	+	3167	1	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	-1665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	NA	False	NA	72	True	ATTAAA	-28	NA	3432218	3435385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_3432200_3435400
ES.15978.1	chr18	-	2808	9	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.6984326841517	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTGTATGTCTAT	237	False	NA	0	True	TATAAA	-19	NA	3337452	3266353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3299161_3299309_3309645_3309756_3325360_3325479_3337379
ES.15978.10	chr18	-	2646	8	NIC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	26.4405378314498	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	14	True	NA	-2	True	TATAAA	-17	NA	3337555	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.11	chr18	-	2747	8	NIC	ENSMUSG00000063889.17	novel	2820	9	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	30.0618410233686	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTGTGTGTATGTC	15	True	NA	-3	True	TATAAA	-16	NA	3337615	3266356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.12	chr18	-	2301	8	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.4905999535686	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTGTGTGTATGTC	81	False	NA	-3	True	TATAAA	-16	NA	3337608	3266356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.13	chr18	-	3128	11	NNC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.1905434386771	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTGCCTGTGTGTATG	86	False	NA	-5	True	TATAAA	-14	NA	3337603	3266358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3299161_3299309_3309645_3309756_3309849_3309988_3325360_3325479_3337379
ES.15978.14	chr18	-	1984	6	NIC	ENSMUSG00000063889.17	novel	2820	9	NA	NA	-19	82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.215227948834	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGAGTTCCACAAGTA	81	False	NA	NA	False	AATGAA	-24	NA	3337608	3266874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3325360_3325479_3337379
ES.15978.15	chr18	-	1658	8	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-26	-44	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	28.4905999535686	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTGGTATTTATTTAA	15	True	NA	NA	False	AATAGA	-22	NA	3337615	3267006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.16	chr18	-	1629	8	NIC	ENSMUSG00000063889.17	novel	2530	8	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	30.6594194335118	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATCATTTTAGGAAAG	-3	True	NA	NA	False	AATAAA	-15	NA	3337486	3267266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3309645_3309756_3325360_3325479_3337379
ES.15978.17	chr18	-	4411	2	ISM	ENSMUSG00000063889.17	ENSMUST00000147138.8	436	4	4340	-242	3649	60	intron_retention	FALSE	canonical	3	17	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTTCCCAGTCTCT	4336	False	NA	NA	False	AATGAA	-31	NA	3277429	3267329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_3267733_3273421
ES.15978.18	chr18	-	822	6	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	32.251511592482	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTATGGCTTTTTCCT	12	True	NA	NA	False	AATATA	-9	NA	3337471	3267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.19	chr18	-	931	7	NIC	ENSMUSG00000063889.17	novel	2662	10	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.9666481275434	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTATGGCTTTTTCCT	25	True	NA	NA	False	AATATA	-9	NA	3337544	3267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.2	chr18	-	2862	9	NIC	ENSMUSG00000063889.17	novel	2820	9	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	31.2507499910002	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	11	True	NA	-2	True	TATAAA	-17	NA	3337619	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3309645_3309756_3325360_3325479_3337379
ES.15978.20	chr18	-	1481	9	NIC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	48	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	29.231564703245	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTATGGCTTTTTCCT	249	False	NA	NA	False	AATATA	-9	NA	3337440	3267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3299161_3299309_3309645_3309756_3325360_3325479_3337379
ES.15978.21	chr18	-	1512	7	NIC	ENSMUSG00000063889.17	novel	1996	8	NA	NA	-28	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	28.095076674274	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTATGGCTTTTTCCT	13	True	NA	NA	False	AATATA	-9	NA	3337617	3267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.22	chr18	-	4811	1	Genic_Genomic	ENSMUSG00000063889.17	novel	NA	NA	NA	NA	-1328	5611	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	3283097	3278286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_3278300_3283100
ES.15978.23	chr18	-	1465	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	92	-301	6	3	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGGAAGATCTTATG	1	True	NA	NA	False	ATTAAA	-17	NA	3337482	3294180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.24	chr18	-	1234	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	43	-21	2	21	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTGCTACTTCTGGC	-10	True	NA	15	True	AATAAA	-33	NA	3337531	3294460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.25	chr18	-	1202	4	FSM	ENSMUSG00000063889.17	ENSMUST00000149803.8	1422	4	-76	296	14	2	multi-exon	FALSE	canonical	3	52	junction_2	16.5797734872612	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTGTGCATTTTA	24	False	NA	-4	True	AATAAA	-14	NA	3337665	3294479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.26	chr18	-	1216	5	ISM	ENSMUSG00000063889.17	ENSMUST00000082141.12	2820	9	8	28124	-7	2	5prime_fragment	FALSE	canonical	3	12	junction_3	32.0419646713494	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTGTGCATTTTA	-12	True	NA	-4	True	AATAAA	-14	NA	3337581	3294479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ES.15978.27	chr18	-	1335	6	NIC	ENSMUSG00000063889.17	novel	1553	9	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	30.6398433416361	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTGTGCATTTTA	-21	True	NA	-4	True	AATAAA	-14	NA	3337590	3294479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3295183_3295321_3295417_3309645_3309756_3325360_3325479_3327493_3327592_3337379
ES.15978.28	chr18	-	1109	5	NNC	ENSMUSG00000063889.17	novel	1256	5	NA	NA	2	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.419079357996	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTACTTTTGTTTTCAT	-3	True	NA	NA	False	AGTAAA	-23	NA	3337572	3294628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_3295183_3295321_3295413_3299155_3299309_3325360_3325479_3337379
ES.15978.3	chr18	-	2607	7	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	28.095076674274	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	17	True	NA	-2	True	TATAAA	-17	NA	3337552	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ES.15978.4	chr18	-	2551	7	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	28.4995126663987	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	24	True	NA	-2	True	TATAAA	-17	NA	3337545	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3325360_3325479_3327493_3327592_3337379
ES.15978.5	chr18	-	2449	7	NNC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.7774023999542	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	-1	True	NA	-2	True	TATAAA	-17	NA	3337484	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_3268130_3273421_3273579_3276693_3276732_3299161_3299309_3309645_3309756_3325360_3325479_3337379
ES.15978.6	chr18	-	2063	6	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	32.251511592482	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	17	True	NA	-2	True	TATAAA	-17	NA	3337552	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.7	chr18	-	2495	7	NIC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	26.6671874949138	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	18	True	NA	-2	True	TATAAA	-17	NA	3337551	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.8	chr18	-	2714	7	NIC	ENSMUSG00000063889.17	novel	2931	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.6930589620803	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	13	True	NA	-2	True	TATAAA	-17	NA	3337617	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3268130_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15978.9	chr18	-	2166	7	NIC	ENSMUSG00000063889.17	novel	2778	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.9666481275434	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGTGTGTATGTCT	11	True	NA	-2	True	TATAAA	-17	NA	3337619	3266355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_3267733_3273421_3273579_3276693_3276730_3295039_3295183_3295321_3295417_3325360_3325479_3337379
ES.15979.1	chr18	-	4350	1	Intergenic	novelGene_13331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGCTTTTATCCTGTT	NA	False	NA	NA	False	NA	NA	NA	3352184	3347834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3347800_3352200
ES.1598.1	chr1	+	4650	11	FSM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	-19	-5	-14	5	multi-exon	FALSE	canonical	0	0	junction_1	104.445200942887	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTCTTTGTCCAGA	5974	False	NA	18	True	AATAAA	-19	NA	152830729	152995012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152830945_152949542_152949632_152950418_152950487_152952654_152952734_152962082_152962210_152964529_152964611_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.10	chr1	+	2070	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	-1342	-1851	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.847885248069	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCCGGGTTCTTA	NA	False	NA	NA	False	AATAGA	-17	NA	152967883	152993059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152967961_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.11	chr1	+	808	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	-1319	-3090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.847885248069	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGAGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	152967906	152991820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152967961_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.12	chr1	+	2137	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-68	-1850	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCCGGGTTCTTAT	NA	False	NA	NA	False	AATAGA	-18	NA	152969157	152993060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.13	chr1	+	3850	6	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-68	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.8323219573872	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152969157	152995011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313_152993389_152993626
ES.1598.14	chr1	+	4088	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-68	4	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152969157	152995011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.15	chr1	+	857	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-29	-3091	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	152969196	152991819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.16	chr1	+	3930	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	-25	-14	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATTTCACAGTGAAATA	NA	False	NA	-98	True	AATAAA	-21	NA	152969200	152994896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.18	chr1	+	292	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	17	230	17	-230	multi-exon	FALSE	canonical	3	57	junction_2	72	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCTTGTTCCAAGCG	NA	False	NA	-89	True	AAAAAG	-14	NA	152969242	152970113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152969301_152969782_152969860_152969956
ES.1598.19	chr1	+	4053	5	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	98.9709553353912	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGAGTCTTGTGTCTT	NA	False	NA	10	True	AATAAA	-11	NA	152969242	152995004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969358_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.2	chr1	+	4494	10	NIC	ENSMUSG00000042751.15	novel	4626	11	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	106.988865233493	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTGTGTCTTTG	6043	False	NA	12	True	AATAAA	-13	NA	152830798	152995006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152830945_152949542_152949632_152950418_152950487_152952654_152952734_152962082_152962210_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.20	chr1	+	4025	5	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	21	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	103.278749024182	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152969246	152995011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969327_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.21	chr1	+	4039	3	FSM	ENSMUSG00000042751.15	ENSMUST00000190960.2	539	3	22	-3522	22	3522	multi-exon	FALSE	canonical	3	57	junction_2	72	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCGTCCCACATTCTT	NA	False	NA	30	True	NA	NA	NA	152969247	152973865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152969301_152969782_152969860_152969956
ES.1598.22	chr1	+	571	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	24	-3324	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCACAGTCATCTTTGGA	NA	False	NA	NA	False	NA	NA	NA	152969249	152991586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.23	chr1	+	858	5	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	24	-3094	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	98.9709553353912	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGTGTGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	152969249	152991816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969358_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.24	chr1	+	816	3	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	39	259	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	23.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	152969264	152970602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969358_152969782_152969860_152969956
ES.1598.25	chr1	+	402	3	NNC	ENSMUSG00000042751.15	novel	539	3	NA	NA	54	-140	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	23.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTATAGGTGTGGCTTG	NA	False	NA	1	True	AAGAAA	-13	NA	152969279	152970203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969358_152969782_152969860_152969956
ES.1598.26	chr1	+	3984	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	232	-10	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	100.263091414538	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCACAGTGAAATATTTT	NA	False	NA	-94	True	AATAAA	-25	NA	152969457	152994900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969608_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.27	chr1	+	4034	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	284	4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	96.3872398193869	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTCTTTGTCCAG	NA	False	NA	17	True	AATAAA	-18	NA	152969509	152995011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969599_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.28	chr1	+	2038	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	325	-1854	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	96.3872398193869	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATCTGCTCCCGGGTTC	NA	False	NA	NA	False	AATAGA	-14	NA	152969550	152993056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969599_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.29	chr1	+	3979	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	342	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	100.263091414538	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGAGTCTTGTGTCTTT	NA	False	NA	11	True	AATAAA	-12	NA	152969567	152995005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152969608_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.3	chr1	+	3357	11	FSM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	85	1184	42	-1087	multi-exon	FALSE	canonical	0	0	junction_1	104.445200942887	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGCTGCCTGCCATT	6078	False	NA	13	True	AATAAA	-25	NA	152830833	152993823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_152830945_152949542_152949632_152950418_152950487_152952654_152952734_152962082_152962210_152964529_152964611_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.30	chr1	+	4103	4	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	138875	-3	398	3	3prime_fragment	FALSE	canonical	3	223	junction_2	11.8415464455544	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGTCTTTGTCCA	NA	False	NA	16	True	AATAAA	-17	NA	152969623	152995010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.31	chr1	+	3923	4	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	138941	111	464	-14	3prime_fragment	FALSE	canonical	3	223	junction_2	11.8415464455544	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATTTCACAGTGAAATA	NA	False	NA	-98	True	AATAAA	-21	NA	152969689	152994896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.32	chr1	+	3695	1	NIC	ENSMUSG00000042751.15	novel	4626	11	NA	NA	22085	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGAGTCTTGTGTCTTT	NA	False	NA	11	True	AATAAA	-12	NA	152991310	152995005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_152991300_152995000
ES.1598.4	chr1	+	4962	10	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	118802	-540	-19675	540	3prime_fragment	FALSE	canonical	1	2	junction_4	106.446068185249	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGACTCCTGGAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	152949550	152995547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152949632_152950418_152950487_152952654_152952734_152962082_152962210_152964529_152964611_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.5	chr1	+	4328	8	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	-9055	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.262880474256	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGAGTCTTGTGTCTT	5158	False	NA	10	True	AATAAA	-11	NA	152960170	152995004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152960308_152962082_152962210_152964529_152964611_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.6	chr1	+	177	1	Antisense	novelGene_ENSMUSG00000099969.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152965078	152965255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_152965100_152965300
ES.1598.7	chr1	+	2197	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135330	1953	-3147	-1856	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCATCTGCTCCCGGGT	NA	False	NA	NA	False	AATAGA	-12	NA	152966078	152993054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.8	chr1	+	4021	5	ISM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	135348	111	-3129	-14	3prime_fragment	FALSE	canonical	3	59	junction_1	77.8985718739439	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATTTCACAGTGAAATA	NA	False	NA	-98	True	AATAAA	-21	NA	152966096	152994896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.1598.9	chr1	+	4019	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	-1345	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.847885248069	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGAGTCTTGTGTCTTT	NA	False	NA	11	True	AATAAA	-12	NA	152967880	152995005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_152967961_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ES.15980.1	chr18	-	132	1	Intergenic	novelGene_13332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3375492	3375360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3375400_3375500
ES.15981.1	chr18	-	228	1	Intergenic	novelGene_13333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCCCAGTACTAGGGA	NA	False	NA	NA	False	AAAAAG	-24	NA	3384825	3384597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3384600_3384800
ES.15982.1	chr18	-	4606	1	Intergenic	novelGene_13334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTGGTCTCAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	3395674	3391068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3391100_3395700
ES.15983.1	chr18	+	6916	2	Genic_Genomic	ENSMUSG00000096528.2	novel	2686	1	NA	NA	-34	4258	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	3471595	3478573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_3477012_3477073
ES.15983.2	chr18	+	6975	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	-31	-4258	-31	4258	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	3471598	3478573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3471600_3478600
ES.15983.3	chr18	+	4897	2	Genic_Genomic	ENSMUSG00000096528.2	novel	2686	1	NA	NA	0	2304	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATATGCTTATTGTTAG	NA	False	NA	NA	False	NA	NA	NA	3471629	3476619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_3472671_3472763
ES.15983.4	chr18	+	4761	2	Genic_Genomic	ENSMUSG00000096528.2	novel	2686	1	NA	NA	0	2168	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAACAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	3471629	3476483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_3472671_3472763
ES.15983.5	chr18	+	4201	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	1	-1516	1	1516	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTATTAGCTAATGCC	NA	False	NA	NA	False	NA	NA	NA	3471630	3475831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3471600_3475800
ES.15984.1	chr18	+	1920	4	NNC	ENSMUSG00000024232.3	novel	5074	3	NA	NA	-801	-3651	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.8297467377443	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTGGTGTCTTTC	NA	False	NA	20	True	AATATA	-15	NA	3507121	3512753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_3507282_3507585_3508286_3511256_3511545_3511981
ES.15984.2	chr18	+	2195	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	-772	3651	-772	-3651	multi-exon	FALSE	canonical	3	117	junction_2	19.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTGGTGTCTTTC	NA	False	NA	20	True	AATATA	-15	NA	3507150	3512753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3508286_3511256_3511545_3511981
ES.15984.3	chr18	+	4865	1	Genic_Genomic	ENSMUSG00000024232.3	novel	NA	NA	NA	NA	-30	-3647	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	NA	False	NA	24	True	AATATA	-19	NA	3507892	3512757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_3507900_3512800
ES.15984.4	chr18	+	2366	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	33	2675	33	-2675	multi-exon	FALSE	canonical	3	117	junction_2	19.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCCTGCATATTTGAAG	1	True	NA	NA	False	NA	NA	NA	3507955	3513729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_3508286_3511256_3511545_3511981
ES.15985.1	chr18	-	160	1	Intergenic	novelGene_13335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	3553363	3553203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3553200_3553400
ES.15986.1	chr18	+	2475	5	Antisense	novelGene_ENSMUSG00002075705.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTGAGGGGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	3765070	3794527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3765180_3768676_3768754_3776064_3776144_3778096_3778174_3792394
ES.15986.2	chr18	+	3229	9	Antisense	novelGene_ENSMUSG00002075705.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	3.55096817783545	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTGCCCCGTAGAGT	NA	False	NA	NA	False	NA	NA	NA	3765077	3853685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3765209_3768676_3768754_3772637_3772686_3778096_3778174_3805978_3806049_3827478_3827560_3828318_3828359_3828565_3828674_3851088
ES.15986.3	chr18	+	1768	6	Antisense	novelGene_ENSMUSG00002075705.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	4.06939798987516	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATCTGTATCATAGAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	3768702	3830014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_3768754_3778096_3778174_3805978_3806049_3827478_3827560_3828318_3828359_3828565
ES.15986.4	chr18	+	7224	3	Intergenic	novelGene_13336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	3831680	3853660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3836272_3836847_3836909_3851088
ES.15986.5	chr18	+	218	1	Intergenic	novelGene_13337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAAGCCAGAGTGAC	NA	False	NA	NA	False	NA	NA	NA	3840258	3840476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_3840300_3840500
ES.15987.1	chr18	-	175	1	Intergenic	novelGene_13338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4152041	4151866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_4151900_4152000
ES.15988.1	chr18	+	3536	2	Antisense	novelGene_ENSMUSG00000073647.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCTGAGTAATTACTTTA	NA	False	NA	NA	False	NA	NA	NA	4195754	4199329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_4196577_4196615
ES.15989.1	chr18	-	4161	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-398	-3144	-398	3144	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTACTATCATCATTTT	NA	False	NA	NA	False	NA	NA	NA	4199336	4195175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_4195200_4199300
ES.15989.2	chr18	-	3886	2	Genic_Genomic	ENSMUSG00000073647.5	novel	619	1	NA	NA	-323	3120	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACATAAATAAAAAAAAAA	73	False	NA	NA	False	AATATA	-34	NA	4199261	4195199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_4197229_4197404
ES.15989.3	chr18	-	2861	2	Intergenic	novelGene_13339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACATAAATAAAAAAAAAA	-1	True	NA	NA	False	AATATA	-34	NA	4199250	4195199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_4198017_4199206
ES.15989.4	chr18	-	3498	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-314	-2565	-314	2565	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCGTAACAGAAGTCCCA	-3	True	NA	NA	False	NA	NA	NA	4199252	4195754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_4195800_4199300
ES.15989.5	chr18	-	955	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-317	-19	-317	19	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	-6	True	NA	NA	False	AGTAAA	-36	NA	4199255	4198300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_4198300_4199300
ES.1599.1	chr1	-	189	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGTAACGTCATG	NA	False	NA	NA	False	NA	NA	NA	152841529	152841340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152841300_152841500
ES.15990.1	chr18	-	251	1	Intergenic	novelGene_13340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCACCTAACAATTTTT	NA	False	NA	NA	False	NA	NA	NA	4319613	4319362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_4319400_4319600
ES.15991.1	chr18	-	2764	8	NNC	ENSMUSG00000024235.12	novel	2569	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.44671171376828	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGGGATTGTATATT	2	True	NA	NA	False	AATAAA	-26	NA	4352951	4331326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348721_4349339_4352851
ES.15992.1	chr18	+	1673	3	NIC	ENSMUSG00000117401.2	novel	845	4	NA	NA	-547	4	intron_retention	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTAGTATAATTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4353010	4368924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4354193_4367858_4368041_4368615
ES.15992.2	chr18	+	1480	5	NNC	ENSMUSG00000117401.2	novel	845	4	NA	NA	-484	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.08972473588517	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTACTAGTATAATTAG	7	False	NA	NA	False	AATAAA	-14	NA	4353073	4368922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4353824_4354100_4354193_4365510_4365660_4367858_4368041_4368615
ES.15993.1	chr18	+	2702	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-51	0	-51	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	8612	False	NA	17	True	AATAAA	-18	NA	4375540	4397330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.10	chr18	+	1973	10	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	69.4482665614849	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	-1	True	NA	16	True	AATAAA	-18	NA	4375602	4396783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387008_4387127_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.11	chr18	+	2199	7	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	83.5651774897229	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-1	True	NA	15	True	AATAAA	-16	NA	4375602	4397328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4394973_4395067_4395155_4395230_4396104
ES.15993.12	chr18	+	4088	9	NIC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	0	1463	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGACTTTGGTTATGGT	-1	True	NA	NA	False	NA	NA	NA	4375602	4398793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.14	chr18	+	5965	7	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	181	junction_2	20.6612896230823	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-1	True	NA	15	True	AATAAA	-16	NA	4375602	4397328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.15	chr18	+	2562	8	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	3	junction_7	77.1222194616693	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGTGATAACAGTATT	-1	True	NA	13	True	AATAAA	-14	NA	4375602	4397326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4396104
ES.15993.16	chr18	+	2023	8	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	3	junction_7	89.3244487408523	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTAGTATCTATTTTC	0	True	NA	17	True	AATAAA	-19	NA	4375603	4396784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4396104
ES.15993.17	chr18	+	1847	8	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	2	-171	intron_retention	FALSE	canonical	1	3	junction_7	77.1222194616693	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGGCAAAAGGCAT	2	True	NA	NA	False	ATTAAA	-12	NA	4375605	4396614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4396104
ES.15993.18	chr18	+	6442	9	FSM	ENSMUSG00000024234.8_ENSMUSG00000117579.2	ENSMUST00000025077.7	2651	9	15	-3806	3	226	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGTTTGTTTGTTTGTT	3	True	NA	NA	False	ATTAAA	-13	NA	4375606	4401136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.2	chr18	+	1955	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-20	716	-20	-171	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGGCAAAAGGCAT	8643	False	NA	NA	False	ATTAAA	-12	NA	4375571	4396614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.20	chr18	+	1890	9	NIC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	83.6345286051162	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTAGTATCTATTTTC	9	True	NA	17	True	AATAAA	-19	NA	4375612	4396784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4387127_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.21	chr18	+	5186	9	FSM	ENSMUSG00000024234.8_ENSMUSG00000117579.2	ENSMUST00000025077.7	2651	9	22	-2557	10	-1023	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGAGTGGTGCCTAAT	10	True	NA	NA	False	ATTAAA	-14	NA	4375613	4399887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.22	chr18	+	1386	8	ISM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	18	2097	10	-1554	5prime_fragment	FALSE	canonical	3	50	junction_2	62.0838800596846	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGTCAGCATTTCTT	10	True	NA	NA	False	AATAAA	-24	NA	4375613	4395231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155
ES.15993.23	chr18	+	2170	8	NNC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	10	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	77.9340380431701	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTCTCTAGTATCTAT	10	True	NA	13	True	AATAAA	-15	NA	4375613	4396780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386950_4387180_4394973_4395230_4396104
ES.15993.24	chr18	+	3199	8	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	10	-2	intron_retention	FALSE	canonical	3	50	junction_3	61.9762956660835	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGTGATAACAGTATT	10	True	NA	13	True	AATAAA	-14	NA	4375613	4397326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.25	chr18	+	1927	9	NNC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	74.0911600665019	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTAGTATCTATTTTC	14	True	NA	17	True	AATAAA	-19	NA	4375617	4396784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387104_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.26	chr18	+	2447	9	NIC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	68.9746330182336	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	15	True	NA	15	True	AATAAA	-16	NA	4375618	4397328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387127_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.27	chr18	+	2395	10	NNC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.3289832505108	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGATAACAGTATTT	17	True	NA	14	True	AATAAA	-15	NA	4375620	4397327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386255_4386383_4386952_4387008_4387127_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.29	chr18	+	4902	9	FSM	ENSMUSG00000024234.8_ENSMUSG00000117579.2	ENSMUST00000025077.7	2651	9	37	-2288	25	-1292	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTAGTTGCTATTT	25	False	NA	NA	False	TTTAAA	-1	NA	4375628	4399618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.3	chr18	+	2113	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-8	546	-8	-1	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTAGTATCTATTTTC	-20	True	NA	17	True	AATAAA	-19	NA	4375583	4396784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.30	chr18	+	4073	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	41	-1463	29	1463	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGACTTTGGTTATGGT	29	False	NA	NA	False	NA	NA	NA	4375632	4398793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.31	chr18	+	2337	1	FSM	ENSMUSG00000024234.8	ENSMUST00000234614.2	3608	1	1301	-30	1301	30	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTATGCACACACACACA	1301	False	NA	NA	False	AAGAAA	-8	NA	4376904	4379241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4376900_4379200
ES.15993.32	chr18	+	3968	4	NIC	ENSMUSG00000024234.8	novel	1880	7	NA	NA	812	-2	intron_retention	FALSE	canonical	3	221	junction_3	1.88561808316413	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	8454	False	NA	16	True	AATAAA	-18	NA	4384057	4396783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.33	chr18	+	8389	3	ISM	ENSMUSG00000024234.8	ENSMUST00000234924.2	1880	7	4738	-6	4738	6	3prime_fragment	FALSE	canonical	3	221	junction_2	2	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATTTCTAATATTT	NA	False	NA	23	True	AATAAA	-24	NA	4387983	4397336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_4395067_4395155_4395230_4396104
ES.15993.34	chr18	+	4143	3	ISM	ENSMUSG00000024234.8	ENSMUST00000234924.2	1880	7	8434	544	8434	1	3prime_fragment	FALSE	canonical	3	221	junction_2	2	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTATCTATTTTCTA	NA	False	NA	19	True	AATAAA	-21	NA	4391679	4396786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_4395067_4395155_4395230_4396104
ES.15993.35	chr18	+	3565	2	NIC	ENSMUSG00000024234.8	novel	1880	7	NA	NA	9098	-2	intron_retention	FALSE	canonical	3	221	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	NA	False	NA	16	True	AATAAA	-18	NA	4392343	4396783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4395230_4396104
ES.15993.36	chr18	+	1989	2	NIC	ENSMUSG00000024234.8	novel	2626	9	NA	NA	11219	0	intron_retention	FALSE	canonical	3	221	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	NA	False	NA	15	True	AATAAA	-16	NA	4394464	4397328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4395230_4396104
ES.15993.37	chr18	+	5128	1	Genic_Genomic	ENSMUSG00000117579.2	novel	NA	NA	NA	NA	-1406	2139	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTTGTTCTTATCTT	1143	False	NA	NA	False	AATAAA	-17	NA	4397921	4403049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_4397900_4403000
ES.15993.38	chr18	+	3390	1	Genic_Genomic	ENSMUSG00000117579.2	novel	NA	NA	NA	NA	224	2031	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGTTTTCCATATATA	2773	False	NA	NA	False	AATAAA	-14	NA	4399551	4402941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_4399600_4402900
ES.15993.4	chr18	+	2091	9	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTAGTATCTATTTT	-14	True	NA	16	True	AATAAA	-18	NA	4375589	4396783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.5	chr18	+	2632	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	-6	0	-2	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-14	True	NA	15	True	AATAAA	-16	NA	4375589	4397328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.6	chr18	+	5166	6	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	-2	6245	-2	-5700	5prime_fragment	FALSE	canonical	3	181	junction_2	22.5175487120601	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTCTGTACTGACATA	-14	True	NA	NA	False	NA	NA	NA	4375589	4391085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952
ES.15993.7	chr18	+	2114	9	NNC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	74.7629587429497	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTAGTATCTATTTTC	-6	True	NA	17	True	AATAAA	-19	NA	4375597	4396784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386155_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.8	chr18	+	1864	8	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	79.7455135965373	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-4	True	NA	18	True	AATAAA	-20	NA	4375599	4396785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4375779_4379568_4379742_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ES.15993.9	chr18	+	3946	9	NNC	ENSMUSG00000024234.8	novel	2651	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	90.3157655118972	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGATAACAGTATTT	-4	True	NA	14	True	AATAAA	-15	NA	4375599	4397327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4387127_4388661_4394973_4395067_4395155_4395230_4396104
ES.15994.1	chr18	+	4347	1	Intergenic	novelGene_13342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAAGCGCTTGAGTGA	6971	False	NA	NA	False	AAAAAG	-4	NA	4410538	4414885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_4410500_4414900
ES.15994.2	chr18	+	3556	1	Intergenic	novelGene_13343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGGCCCATTAACATAC	NA	False	NA	NA	False	NA	NA	NA	4413855	4417411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_4413900_4417400
ES.15995.1	chr18	-	6149	1	Intergenic	novelGene_13341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTAGTTATAACTTGCC	NA	False	NA	NA	False	NA	NA	NA	4410783	4404634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_4404600_4410800
ES.15996.1	chr18	+	3240	6	Intergenic	novelGene_13344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1.2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTAAATAGTCTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	4432490	4476007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_4432574_4465324_4467448_4467491_4468008_4474355_4474543_4475475_4475751_4475951
ES.15997.1	chr18	+	6742	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	41	-1	41	1	multi-exon	TRUE	canonical	3	21	junction_2	13.6950923894494	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGTATTGTGTCTTC	-25	True	NA	15	True	AATAAA	-20	NA	4634918	4682870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
ES.15997.2	chr18	+	5013	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	54	1715	54	345	multi-exon	FALSE	canonical	3	21	junction_2	13.6950923894494	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGCTGTGAGAGTACAT	-12	True	NA	NA	False	CATAAA	-14	NA	4634931	4681154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
ES.15997.3	chr18	+	4741	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	77	1964	77	96	multi-exon	FALSE	canonical	3	21	junction_2	13.6950923894494	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTTTTTATAAAAT	11	True	NA	NA	False	AATAGA	-19	NA	4634954	4680905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
ES.15998.1	chr18	-	2277	3	Antisense	novelGene_ENSMUSG00000033960.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGCCTGCTACTACCG	NA	False	NA	NA	False	NA	NA	NA	4674391	4634962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_4635031_4649073_4649405_4672513
ES.15999.1	chr18	+	784	4	NNC	ENSMUSG00000097043.2	novel	3906	10	NA	NA	-6150	-38294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCTTGGCTGTCCTTGC	NA	False	NA	NA	False	CATAAA	-17	NA	4806335	4812665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4806474_4811387_4811516_4811830_4812256_4812572
ES.16.1	chr1	-	846	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGACAACATTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	4927848	4927002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4927000_4927800
ES.160.1	chr1	-	1603	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGACCGCTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	18010070	18008467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_18008500_18010100
ES.1600.1	chr1	-	3957	3	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTACATTCCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	152958932	152953784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152954245_152954327_152954525_152955632
ES.1600.2	chr1	-	5149	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTACATTCCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	152958933	152953784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152953800_152958900
ES.16000.1	chr18	+	7508	36	NNC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	-327	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.2583180766271	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAATTCCAAGCCTGT	NA	False	NA	28	True	AATAAA	-34	NA	4920212	5119305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920393_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5055979_5056850_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.10	chr18	+	7759	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	29.912716564112	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-38	True	NA	13	True	AATAAA	-19	NA	4920509	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.11	chr18	+	6612	33	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	27.9985874364672	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-24	True	NA	13	True	AATAAA	-19	NA	4920523	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105876_5106673_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.12	chr18	+	6829	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	19.7669816616964	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAATTCCAAGCCTGT	-20	True	NA	28	True	AATAAA	-34	NA	4920527	5119305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.14	chr18	+	6524	33	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	23.3264033607841	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-18	True	NA	11	True	AATAAA	-17	NA	4920529	5119288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.15	chr18	+	6692	34	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.27631758922	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTCATTGATCAGTTC	-17	True	NA	8	True	AATAAA	-14	NA	4920530	5119285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046594_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.17	chr18	+	6361	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-6	233	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	19.7669816616964	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATATGTATTCATTCACT	-14	True	NA	NA	False	NA	NA	NA	4920533	5118843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.18	chr18	+	7751	37	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-6	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	31.6520799737816	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAACATTACACATGTCA	-14	True	NA	9	True	AATAAA	-25	NA	4920533	5119225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.19	chr18	+	6781	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	26.0922803416184	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-14	True	NA	13	True	AATAAA	-19	NA	4920533	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.2	chr18	+	6544	34	NNC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	-327	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.317200484138	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTCATTGATCAGTTCA	NA	False	NA	9	True	AATAAA	-15	NA	4920212	5119286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920393_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082940_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.20	chr18	+	6716	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	24.8897661527147	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-14	True	NA	13	True	AATAAA	-19	NA	4920533	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.22	chr18	+	7672	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	28.0354585975602	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-8	True	NA	13	True	AATAAA	-19	NA	4920539	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5055979_5056850_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.23	chr18	+	8159	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	1	-2	intron_retention	FALSE	canonical	1	4	junction_6	27.0005951708031	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTCATTGATCAGTTCA	-7	True	NA	9	True	AATAAA	-15	NA	4920540	5119286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.24	chr18	+	7644	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	29.3319356500656	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-7	True	NA	13	True	AATAAA	-19	NA	4920540	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5055979_5056850_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.25	chr18	+	7847	38	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.9352202234955	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCATTGTAAACATTAC	-7	True	NA	1	True	AATAAA	-17	NA	4920540	5119217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.26	chr18	+	7738	37	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.3172747386756	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-6	True	NA	11	True	AATAAA	-17	NA	4920541	5119288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5055979_5056850_5058124_5058160_5058712_5058775_5059229_5059370_5060514_5060611_5062161_5062406_5063193_5063771_5064472_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.28	chr18	+	5414	28	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	25.3161626886553	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-6	True	NA	13	True	AATAAA	-19	NA	4920541	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.3	chr18	+	6445	33	NNC	ENSMUSG00000024236.19	novel	7433	35	NA	NA	-325	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.535869003106	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	NA	False	NA	13	True	AATAAA	-19	NA	4920214	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920393_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.31	chr18	+	7549	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	32.752875676067	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	-6	True	NA	11	True	AATAAA	-17	NA	4920541	5119288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5055979_5056850_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.34	chr18	+	6680	34	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	29.8682137537126	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTCATTGATCAGTTCA	-6	True	NA	9	True	AATAAA	-15	NA	4920541	5119286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.36	chr18	+	6883	36	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	26.8421538720311	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-5	True	NA	13	True	AATAAA	-19	NA	4920542	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.38	chr18	+	6583	33	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	27.8272959239215	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGATCAGTTCACA	4	True	NA	11	True	AATAAA	-17	NA	4920551	5119288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116117_5116972_5117098_5118099_5118256_5118345
ES.16000.39	chr18	+	6538	33	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	22.5346954716499	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	14	True	NA	13	True	AATAAA	-19	NA	4920561	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.4	chr18	+	6763	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-65	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	17.6671084720473	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCAGTTCACATTGAAT	NA	False	NA	17	True	AATAAA	-23	NA	4920474	5119294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.41	chr18	+	6843	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	26.6041239616099	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTGAATTCCAAGCCT	21	True	NA	26	True	AATAAA	-32	NA	4920568	5119303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.42	chr18	+	6669	34	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	23.2822344848577	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCAGTTCACATTGAAT	33	True	NA	17	True	AATAAA	-23	NA	4920580	5119294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118087_5118256_5118345
ES.16000.43	chr18	+	6703	35	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.6274841544675	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-1	True	NA	13	True	AATAAA	-19	NA	4920631	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040154_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.44	chr18	+	6802	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	65	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.6830263199037	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	-1	True	NA	13	True	AATAAA	-19	NA	4920631	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_4977790_4977879_5037107_5037166_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5060514_5060611_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.45	chr18	+	5486	25	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	65	7484	intron_retention	FALSE	canonical	0	0	junction_24	21.7586189819115	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAACACATTGAAAAG	-1	True	NA	NA	False	AATAAA	-21	NA	4920631	5103000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5100040_5102700
ES.16000.46	chr18	+	6374	34	NNC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	-138	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5321315837931	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCCAATTCATTGATCA	31	False	NA	4	True	AATAAA	-10	NA	4921587	5119281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4921612_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.47	chr18	+	6503	34	NIC	ENSMUSG00000024236.19	novel	6594	36	NA	NA	-95	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.5321315837931	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	74	False	NA	13	True	AATAAA	-19	NA	4921630	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4921775_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.48	chr18	+	6524	35	NIC	ENSMUSG00000024236.19	novel	6594	36	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	22.506842481288	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCATTGTAAACATTACA	89	False	NA	2	True	AATAAA	-18	NA	4921645	5119218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4921775_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.49	chr18	+	5197	1	NIC	ENSMUSG00000024236.19	novel	6594	36	NA	NA	-17213	-21280	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	4976599	4981796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4976600_4981800
ES.16000.5	chr18	+	7494	37	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.6767671570828	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	NA	False	NA	13	True	AATAAA	-19	NA	4920493	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5056368_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.50	chr18	+	6399	34	NIC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	62	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	21.5321315837931	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCATTGTAAACATTAC	-1	True	NA	1	True	AATAAA	-17	NA	4993874	5119217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4993988_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.51	chr18	+	4473	18	NNC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	-17856	-2887	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.4360930483677	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTCTAGAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	5017309	5092629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5017467_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5090786_5092313_5092536
ES.16000.52	chr18	+	3909	21	ISM	ENSMUSG00000024236.19	ENSMUST00000143254.8	6594	36	115411	23415	1971	368	internal_fragment	FALSE	canonical	3	62	junction_15	10.783668207062	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATTTTTTTCACTTGG	2044	False	NA	NA	False	ATTAAA	-18	NA	5037136	5095884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435
ES.16000.53	chr18	+	4303	22	NNC	ENSMUSG00000024236.19	novel	6243	33	NA	NA	219	7492	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	21.3396036703416	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATTGAAAAGAAGTTATT	NA	False	NA	NA	False	AATAAA	-29	NA	5046793	5103008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5102700
ES.16000.54	chr18	+	6641	29	NIC	ENSMUSG00000024236.19	novel	7433	35	NA	NA	-8359	-3	intron_retention	FALSE	canonical	1	4	junction_1	22.497703964482	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACCCATTGTAAACATT	NA	False	NA	-1	True	AATAAA	-15	NA	5056112	5119215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.56	chr18	+	7451	27	NIC	ENSMUSG00000024236.19	novel	7433	35	NA	NA	-7856	-1	intron_retention	FALSE	canonical	3	62	junction_9	15.6012156255236	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	NA	False	NA	13	True	AATAAA	-19	NA	5056615	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.57	chr18	+	5774	25	NIC	ENSMUSG00000024236.19	novel	7433	35	NA	NA	-5369	-24	intron_retention	FALSE	canonical	3	62	junction_8	15.377145288454	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATATCAAAGTAA	NA	False	NA	-13	True	NA	NA	NA	5059102	5119264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.59	chr18	+	4925	24	ISM	ENSMUSG00000024236.19	ENSMUST00000025079.16	7433	35	16616	-16	-1281	5	3prime_fragment	FALSE	canonical	3	62	junction_6	15.5055938439547	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGAATTCCAAGCCTG	NA	False	NA	27	True	AATAAA	-33	NA	5063190	5119304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.6	chr18	+	15527	33	NNC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-46	-1	intron_retention	TRUE	non_canonical	0	0	junction_2	35.5214366395491	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	NA	False	NA	13	True	AATAAA	-19	NA	4920493	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_4920875_4971089_4971198_4977790_4977879_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054014_5054099_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5102528_5102611_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5118256_5118345
ES.16000.61	chr18	+	3400	13	ISM	ENSMUSG00000024236.19	ENSMUST00000125512.8	4060	21	46	18720	46	5055	intron_retention	FALSE	canonical	3	62	junction_5	10.7030629053349	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTTCAAAAATTTTTT	NA	False	NA	NA	False	AATATA	-13	NA	5064517	5100571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907
ES.16000.62	chr18	+	5986	20	ISM	ENSMUSG00000024236.19	ENSMUST00000025079.16	7433	35	37813	-2	-9993	-1	3prime_fragment	FALSE	canonical	3	62	junction_2	16.7139863802811	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGATCAGTTCACATT	NA	False	NA	13	True	AATAAA	-19	NA	5084387	5119290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.63	chr18	+	3412	18	NNC	ENSMUSG00000024236.19	novel	7433	35	NA	NA	-5610	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.8746932065856	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCATTGTAAACATTAC	NA	False	NA	1	True	AATAAA	-17	NA	5088770	5119217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114573_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.64	chr18	+	2994	14	ISM	ENSMUSG00000024236.19	ENSMUST00000025079.16	7433	35	48595	24	789	-24	3prime_fragment	FALSE	canonical	3	75	junction_2	15.3345338694752	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATATCAAAGTAA	NA	False	NA	-13	True	NA	NA	NA	5095169	5119264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.66	chr18	+	1903	8	ISM	ENSMUSG00000024236.19	ENSMUST00000025079.16	7433	35	59189	71	2089	-1	3prime_fragment	FALSE	canonical	3	84	junction_1	14.321384039831	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCATTGTAAACATTAC	NA	False	NA	1	True	AATAAA	-17	NA	5105763	5119217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.67	chr18	+	5243	5	FSM	ENSMUSG00000024236.19	ENSMUST00000129543.2	1732	5	-3512	1	-3512	-1	multi-exon	FALSE	canonical	3	100	junction_3	13.1790553530972	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCATTGTAAACATTAC	NA	False	NA	1	True	AATAAA	-17	NA	5110740	5119217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.7	chr18	+	7027	36	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	-45	6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	27.5379663707532	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAATTCCAAGCCTGT	NA	False	NA	28	True	AATAAA	-34	NA	4920494	5119305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ES.16000.9	chr18	+	6072	1	Genic_Genomic	ENSMUSG00000024236.19	novel	NA	NA	NA	NA	-30	-76495	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGTTGACTATCTAAG	-38	True	NA	NA	False	NA	NA	NA	4920509	4926581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_4920500_4926600
ES.16001.1	chr18	-	175	1	Intergenic	novelGene_13345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGTAGTCCTTA	NA	False	NA	NA	False	NA	NA	NA	4947154	4946979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_4947000_4947200
ES.16002.1	chr18	-	5034	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	43	-1866	17	1866	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTGGGTCTTCATCCCA	-9	True	NA	NA	False	AATAAA	-36	NA	5334396	5208162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ES.16002.10	chr18	-	2729	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	34	448	8	-353	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTTTCTAACATATG	-18	True	NA	NA	False	AATAAA	-14	NA	5334405	5210476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ES.16002.2	chr18	-	3230	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	-21	-97	-21	2	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTTTTCTTAAAT	-27	True	NA	NA	False	CATAAA	-19	NA	5334828	5210026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
ES.16002.3	chr18	-	3573	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	-360	-2	8	2	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTTTTCTTAAAT	2	True	NA	NA	False	CATAAA	-19	NA	5334799	5210026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ES.16002.4	chr18	-	3291	6	NNC	ENSMUSG00000050945.9	novel	3211	5	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.81835016690686	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATTTTTGTTGTTTTC	-6	True	NA	NA	False	CATAAA	-13	NA	5334393	5210032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_5211199_5213118_5214920_5217214_5217345_5245385_5245454_5288860_5288939_5334345
ES.16002.5	chr18	-	2906	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	-36	341	-36	-246	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGAAAATTGTTATTC	326	False	NA	NA	False	AATAAA	-29	NA	5334475	5210369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ES.16002.6	chr18	-	2966	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	-100	246	-100	-246	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGAAAATTGTTATTC	NA	False	NA	NA	False	AATAAA	-29	NA	5334907	5210369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
ES.16002.7	chr18	-	3281	5	NNC	ENSMUSG00000050945.9	novel	3211	5	NA	NA	54	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.51314879522022	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAGAGAAAATTGTTA	442	False	NA	NA	False	AATAAA	-26	NA	5334359	5210372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5333851
ES.16002.8	chr18	-	2682	4	NIC	ENSMUSG00000050945.9	novel	3112	5	NA	NA	-1	-353	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10.8012344973464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTTTCTAACATATG	-7	True	NA	NA	False	AATAAA	-14	NA	5334808	5210476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_5211199_5213118_5214920_5245385_5245454_5334717
ES.16002.9	chr18	-	2775	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	-16	353	-16	-353	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTTTCTAACATATG	-22	True	NA	NA	False	AATAAA	-14	NA	5334823	5210476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
ES.16003.1	chr18	-	181	1	Intergenic	novelGene_13346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATAAGGAACAGA	NA	False	NA	NA	False	NA	NA	NA	5345364	5345183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_5345200_5345400
ES.16004.1	chr18	-	1702	1	Intergenic	novelGene_13347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCAGTGTATGACTCT	NA	False	NA	NA	False	NA	NA	NA	5423379	5421677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_5421700_5423400
ES.16005.1	chr18	+	5242	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	3	556	3	-556	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	430	False	NA	NA	False	AATAAA	-18	NA	5591866	5774911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.10	chr18	+	7076	7	ISM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	32	557	5	-557	intron_retention	FALSE	canonical	3	32	junction_5	6.42910050732864	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGTCGTTCTTTGGA	10	True	NA	NA	False	AATAAA	-17	NA	5591895	5774910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383
ES.16005.11	chr18	+	5279	9	NNC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	6	-559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.6964138741867	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCTGTCGTTCTTTG	11	True	NA	NA	False	AATAAA	-15	NA	5591896	5774908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5762159_5762230_5766220_5768026_5770383_5770565_5772428
ES.16005.12	chr18	+	321	1	Intergenic	novelGene_13348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	5699552	5699873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_5699600_5699900
ES.16005.2	chr18	+	5368	9	NIC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	2	-560	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	20.7424685126915	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTGCTGTCGTTCTTT	-12	True	NA	NA	False	AATAAA	-14	NA	5591873	5774907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5591968_5641381_5641519_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.3	chr18	+	5520	10	NIC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	7	-557	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	21.7102126505784	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGTCGTTCTTTGGA	-7	True	NA	NA	False	AATAAA	-17	NA	5591878	5774910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5591968_5633203_5633358_5641381_5641519_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.4	chr18	+	5267	8	NNC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	-5	-561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.2667312179206	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACCTGCTGTCGTTCTT	0	True	NA	NA	False	AATAAA	-13	NA	5591885	5774906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766171_5768026_5770383_5770565_5772428
ES.16005.5	chr18	+	5375	9	NIC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	-4	-557	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.1349828483488	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGTCGTTCTTTGGA	1	True	NA	NA	False	AATAAA	-17	NA	5591886	5774910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5591968_5633203_5633358_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.6	chr18	+	5016	7	NIC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	1	-556	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.7484176581315	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTCGTTCTTTGGAT	6	True	NA	NA	False	AATAAA	-18	NA	5591891	5774911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_5591968_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.7	chr18	+	5923	10	NNC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	2	-560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.6017589176781	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTGCTGTCGTTCTTT	7	True	NA	NA	False	AATAAA	-14	NA	5591892	5774907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5591968_5696111_5696321_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5769456_5769959_5770383_5770565_5772428
ES.16005.8	chr18	+	5772	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	29	0	2	0	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGTTGTGATGTGTG	7	True	NA	NA	False	AATAAA	-19	NA	5591892	5775467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ES.16005.9	chr18	+	5820	8	NNC	ENSMUSG00000024238.16	novel	5801	8	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.2667312179206	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTTGTGATGTGTGG	9	True	NA	NA	False	AATAAA	-20	NA	5591894	5775468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766171_5768026_5770383_5770565_5772428
ES.16006.1	chr18	-	1094	4	FSM	ENSMUSG00000063087.16	ENSMUST00000161383.3	664	4	-349	-81	-146	-5	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGCTTTGGCTTCTG	1395	False	NA	NA	False	ATTAAA	-11	NA	5592539	5574903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_5575412_5583011_5583134_5583712_5583797_5592159
ES.16007.1	chr18	+	4583	1	Intergenic	novelGene_13349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAACACATCAGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	5798547	5803130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_5798500_5803100
ES.16008.1	chr18	+	210	1	Intergenic	novelGene_13350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAAGGCCATCCTCAG	NA	False	NA	NA	False	NA	NA	NA	5951486	5951696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_5951500_5951700
ES.16009.1	chr18	-	7117	1	FSM	ENSMUSG00000117548.2	ENSMUST00000234469.2	768	1	-6350	1	-6350	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGCGTATGTATGTG	8735	False	NA	NA	False	ACTAAA	-3	NA	6021371	6014254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6014300_6021400
ES.1601.1	chr1	-	3087	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCAGCTCTGGCTGATCC	NA	False	NA	NA	False	NA	NA	NA	152978164	152975077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152975100_152978200
ES.16010.1	chr18	+	155	1	Intergenic	novelGene_13351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	6039788	6039943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6039800_6039900
ES.16011.1	chr18	+	4951	1	Intergenic	novelGene_13352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTGCCAGGATAGACT	NA	False	NA	NA	False	NA	NA	NA	6100252	6105203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6100300_6105200
ES.16012.1	chr18	+	5581	1	Intergenic	novelGene_13353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTCAAAATGAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	6118536	6124117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6118500_6124100
ES.16012.2	chr18	+	3837	2	Antisense	novelGene_ENSMUSG00000041225.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6118537	6124081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_6119339_6121045
ES.16013.1	chr18	-	4915	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-135	-349	56	-9	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTTCTTTTTTTTT	20	False	NA	-2	True	ATTAAA	-42	NA	6136042	6024435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.10	chr18	-	4074	16	NIC	ENSMUSG00000041225.17	novel	4431	18	NA	NA	-35	-21	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	48.531593375404	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	57	False	NA	-14	True	ATTAAA	-30	NA	6136005	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
ES.16013.11	chr18	-	4486	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	3	-21	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	47.0558179187229	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-5	True	NA	-14	True	ATTAAA	-30	NA	6135952	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.12	chr18	-	4412	16	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	-21	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	45.5037971553535	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-6	True	NA	-14	True	ATTAAA	-30	NA	6135953	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.13	chr18	-	4725	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-117	-2108	-35	-21	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	57	False	NA	-14	True	ATTAAA	-30	NA	6136005	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.14	chr18	-	4319	15	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	1	-21	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	57.166959202758	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-12	True	NA	-14	True	ATTAAA	-30	NA	6135959	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.17	chr18	-	4048	16	NNC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	-10	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.4369548691585	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-33	True	NA	-14	True	ATTAAA	-30	NA	6135980	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6100468_6100609_6135803
ES.16013.18	chr18	-	6075	3	NIC	ENSMUSG00000041225.17	novel	4506	16	NA	NA	3242	-21	intron_retention	FALSE	canonical	3	181	junction_1	2.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	7942	False	NA	-14	True	ATTAAA	-30	NA	6031465	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6028095_6028193
ES.16013.19	chr18	-	4896	19	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-4	-21	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	49.2688830754887	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-27	True	NA	-14	True	ATTAAA	-30	NA	6135974	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135817
ES.16013.2	chr18	-	4927	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	107	-769	-21	-21	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-44	True	NA	-14	True	ATTAAA	-30	NA	6135991	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.20	chr18	-	4762	18	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	48.8421651181191	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTAATATTTTCCT	-11	True	NA	-18	True	ATTAAA	-26	NA	6135958	6024451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057503_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.21	chr18	-	4637	17	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	0	-25	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	49.8193219920745	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGTAATATTTTCCT	12	True	NA	-18	True	ATTAAA	-26	NA	6135935	6024451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135817
ES.16013.22	chr18	-	5225	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-11	-31	intron_retention	FALSE	canonical	3	72	junction_9	37.9777381336751	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAACCAGTAATAT	29	True	NA	-24	True	ATTAAA	-20	NA	6135918	6024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.23	chr18	-	8843	9	NIC	ENSMUSG00000041225.17	novel	4506	16	NA	NA	16129	-31	intron_retention	FALSE	canonical	3	136	junction_6	17.5410233452897	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAACCAGTAATAT	8187	False	NA	-24	True	ATTAAA	-20	NA	6053811	6024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6039456_6049276_6049359_6052861
ES.16013.24	chr18	-	4905	19	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	4	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.8678737080867	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAACCAGTAATAT	-19	True	NA	-24	True	ATTAAA	-20	NA	6135966	6024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057503_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.25	chr18	-	4091	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-1	-31	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	52.8467344662847	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAACCAGTAATAT	-24	True	NA	-24	True	ATTAAA	-20	NA	6135971	6024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135817
ES.16013.27	chr18	-	4189	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-12	-34	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	59.118261629817	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAACAAAACCAGTAA	-35	True	NA	-27	True	ATTAAA	-17	NA	6135982	6024460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6073210_6073287_6135803
ES.16013.28	chr18	-	4468	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-29	-1939	-10	168	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGTGTTTCTTGTTTC	30	True	NA	NA	False	CATAAA	-20	NA	6135917	6024616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.29	chr18	-	4708	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	156	-599	-1	167	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGTGTTTCTTGTTT	5	True	NA	NA	False	CATAAA	-19	NA	6135942	6024617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.3	chr18	-	4789	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-24	-21	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-47	True	NA	-14	True	ATTAAA	-30	NA	6135994	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.30	chr18	-	4626	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-32	-163	2	163	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTCCTGTGTTTCTT	8	True	NA	NA	False	CATAAA	-15	NA	6135939	6024621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.31	chr18	-	4314	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	162	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	47.0558179187229	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTGTCCTGTGTTTCT	-8	True	NA	NA	False	CATAAA	-14	NA	6135955	6024622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.32	chr18	-	3378	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	49.2946735839685	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTTTTAGTTCTTAAT	-30	True	NA	3	True	AATAAA	-40	NA	6135977	6025190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
ES.16013.33	chr18	-	4189	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	102	-26	-26	6	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTTTTAGTTCTTAAT	-49	True	NA	3	True	AATAAA	-40	NA	6135996	6025190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.34	chr18	-	3684	16	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	45.5037971553535	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTTTTAGTTCTTAAT	-21	True	NA	3	True	AATAAA	-40	NA	6135968	6025190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.35	chr18	-	3947	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	7	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	49.2556706760755	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTTTTAGTTCTTAAT	19	True	NA	3	True	AATAAA	-40	NA	6135928	6025190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.36	chr18	-	3464	14	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	46.6747527511255	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCGTTTTAGTTCTT	-11	True	NA	0	True	AATAAA	-37	NA	6135958	6025193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6111684_6112440_6115813_6115851_6135803
ES.16013.38	chr18	-	3970	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-108	-1362	-26	3	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCGTTTTAGTTCTT	-49	True	NA	0	True	AATAAA	-37	NA	6135996	6025193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.39	chr18	-	2997	14	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	-7	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	60.2233515424533	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCGTTTTAGTTCTT	33	True	NA	0	True	AATAAA	-37	NA	6135914	6025193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
ES.16013.4	chr18	-	3999	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-26	-21	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	50.5179396078484	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-49	True	NA	-14	True	ATTAAA	-30	NA	6135996	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6135803
ES.16013.40	chr18	-	3214	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	50.5179396078484	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGCGTTTTAGTTCT	-11	True	NA	-1	True	AATAAA	-36	NA	6135958	6025194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6135803
ES.16013.41	chr18	-	3594	19	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.9741407975876	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGCGTTTTAGTTCT	17	True	NA	-1	True	AATAAA	-36	NA	6135930	6025194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6054060_6054252_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6073210_6073287_6135803
ES.16013.42	chr18	-	3312	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-35	7	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	48.531593375404	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTTTCCATTGGAAAT	57	False	NA	-16	True	AATAAA	-21	NA	6136005	6025209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
ES.16013.43	chr18	-	4042	18	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.0032760398412	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTTTTTCCATTGGAA	17	True	NA	-18	True	AATAAA	-19	NA	6135930	6025211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061831_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.44	chr18	-	4063	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-60	428	3	4	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTTTTTTCCATTGGA	-20	True	NA	-19	True	AATAAA	-18	NA	6135967	6025212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.46	chr18	-	3893	17	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	49.8193219920745	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGTTTTTTTCCATTGG	-6	True	NA	-20	True	AATAAA	-17	NA	6135953	6025213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135817
ES.16013.47	chr18	-	5510	4	ISM	ENSMUSG00000041225.17	ENSMUST00000182066.8	4506	16	80415	787	2759	3	intron_retention	FALSE	canonical	3	171	junction_2	6.23609564462324	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGTTTTTTTCCATTGG	7459	False	NA	-20	True	AATAAA	-17	NA	6031948	6025213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193
ES.16013.48	chr18	-	4304	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	7	2	intron_retention	FALSE	canonical	3	72	junction_10	36.782245632234	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGTTTTTTTCCATTG	19	True	NA	-21	True	AATAAA	-16	NA	6135928	6025214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.5	chr18	-	4450	17	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-11	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.9464029227975	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	29	True	NA	-14	True	ATTAAA	-30	NA	6135918	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052918_6057512_6057592_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.50	chr18	-	3366	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	50.823869824568	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-7	True	NA	-23	True	AATAAA	-14	NA	6135954	6025216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6115813_6115851_6135803
ES.16013.51	chr18	-	8304	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-5	0	intron_retention	FALSE	canonical	3	10	junction_13	45.089343407161	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	1	True	NA	-23	True	AATAAA	-14	NA	6135946	6025216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6057592_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
ES.16013.52	chr18	-	3112	15	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-6	True	NA	-23	True	AATAAA	-14	NA	6135953	6025216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
ES.16013.53	chr18	-	3963	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	10	True	NA	-23	True	AATAAA	-14	NA	6135937	6025216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.54	chr18	-	3474	19	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.6841162823719	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	19	True	NA	-23	True	AATAAA	-14	NA	6135928	6025216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6046395_6046530_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6115813_6115851_6135803
ES.16013.55	chr18	-	4118	19	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.8678737080867	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTAGAGTTTTTTTCC	7	True	NA	-25	True	AATAAA	-12	NA	6135940	6025218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057503_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.57	chr18	-	4107	19	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	49.2688830754887	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	-11	True	NA	-27	True	AATAAA	-10	NA	6135958	6025220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135817
ES.16013.58	chr18	-	3727	3	NIC	ENSMUSG00000041225.17	novel	4506	16	NA	NA	4817	-4	intron_retention	FALSE	canonical	3	181	junction_1	2.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	9517	False	NA	-27	True	AATAAA	-10	NA	6029890	6025220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6028095_6028193
ES.16013.59	chr18	-	3939	18	NNC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	48.8421651181191	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	45	True	NA	-27	True	AATAAA	-10	NA	6135902	6025220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057501_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.6	chr18	-	4099	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	-21	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	49.2946735839685	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-8	True	NA	-14	True	ATTAAA	-30	NA	6135955	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
ES.16013.60	chr18	-	4228	3	ISM	ENSMUSG00000041225.17	ENSMUST00000182066.8	4506	16	81789	794	4133	-4	intron_retention	FALSE	canonical	3	171	junction_2	5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	8833	False	NA	-27	True	AATAAA	-10	NA	6030574	6025220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6026731_6027574_6027678_6027959
ES.16013.61	chr18	-	3264	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	60.9354166310529	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTAGAGTTTTTTT	-11	True	NA	-27	True	AATAAA	-10	NA	6135958	6025220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6073210_6073287_6135803
ES.16013.62	chr18	-	3220	17	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	59.8131204252044	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATGCTTAGAGTTTTTT	-6	True	NA	-28	True	AATAAA	-9	NA	6135953	6025221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6073210_6073287_6115813_6115851_6135803
ES.16013.63	chr18	-	3128	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-9	1312	-9	335	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTGCATATTTCAGGGT	31	True	NA	NA	False	AATGAA	-20	NA	6135916	6026096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.64	chr18	-	4830	2	FSM	ENSMUSG00000041225.17	ENSMUST00000182343.2	556	2	219	-4493	219	-1911	multi-exon	FALSE	canonical	3	136	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGAATTCTGAAGCTG	4919	False	NA	NA	False	ATTAAA	-28	NA	6034488	6028466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6033258_6034449
ES.16013.65	chr18	-	3309	13	ISM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-117	3991	-35	2413	5prime_fragment	FALSE	canonical	3	59	junction_9	36.4264860903284	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTACCTCATTCCCTGGC	57	False	NA	NA	False	ATTAAA	-17	NA	6136005	6030546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.66	chr18	-	4245	7	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	-33	2752	intron_retention	FALSE	canonical	3	59	junction_3	32.3625297733866	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTACTCACACTGTCTGT	59	False	NA	NA	False	NA	NA	NA	6136003	6054806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ES.16013.67	chr18	-	3770	1	NIC	ENSMUSG00000041225.17	novel	4506	16	NA	NA	11325	2713	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAAAAAAAAAATCTCTG	3383	False	NA	NA	False	TTTAAA	-22	NA	6058615	6054845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6054800_6058600
ES.16013.8	chr18	-	3926	15	NIC	ENSMUSG00000041225.17	novel	2500	17	NA	NA	-28	-21	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-51	True	NA	-14	True	ATTAAA	-30	NA	6135998	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
ES.16013.9	chr18	-	5162	20	NNC	ENSMUSG00000041225.17	novel	4162	20	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	56.8250949206632	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAATATTTTCCTTCCT	-11	True	NA	-14	True	ATTAAA	-30	NA	6135958	6024447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6129373_6129642_6135803
ES.16014.1	chr18	+	2328	1	Intergenic	novelGene_13354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCCAACAACCAAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	6185817	6188145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6185800_6188100
ES.16015.1	chr18	+	176	1	Intergenic	novelGene_13355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	6221562	6221738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6221600_6221700
ES.16016.1	chr18	-	6197	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	10	343	intron_retention	TRUE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGAGGCAGGTGTGGT	5	True	NA	NA	False	GATAAA	-16	NA	6241513	6200658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.100	chr18	-	5927	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	215.348105169282	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAATGACACATTTGA	2	True	NA	-26	True	AATAAA	-16	NA	6241516	6201027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.101	chr18	-	5945	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAATGACACATTTGA	-2	True	NA	-26	True	AATAAA	-16	NA	6241520	6201027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202771_6202828_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.103	chr18	-	5780	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	332.633520817728	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAATGACACATTTGA	-1	True	NA	-26	True	AATAAA	-16	NA	6241519	6201027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225650_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.105	chr18	-	4492	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-27	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTAATGACACATTTG	2	True	NA	-27	True	AATAAA	-15	NA	6241516	6201028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6201900_6203405_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.106	chr18	-	6515	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-28	intron_retention	FALSE	canonical	0	0	junction_8	219.33920648165	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGTAATGACACATTT	-1	True	NA	-28	True	AATAAA	-14	NA	6241519	6201029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.108	chr18	-	5812	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-8	228	-8	-228	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGCATAACTGAATTT	-13	True	NA	NA	False	ATTAAA	-28	NA	6241531	6201229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.109	chr18	-	5634	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-228	intron_retention	FALSE	non_canonical	0	0	junction_1	324.631543527819	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGCATAACTGAATTT	-1	True	NA	NA	False	ATTAAA	-28	NA	6241519	6201229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208184_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.11	chr18	-	6019	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-18	-13	intron_retention	FALSE	canonical	0	0	junction_8	286.101587552394	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGAACCTTACTTCATG	-23	True	NA	-13	True	AATAAA	-29	NA	6241541	6201014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214070_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.110	chr18	-	5626	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-233	intron_retention	TRUE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATACTATGCATAACTG	-1	True	NA	NA	False	ATTAAA	-23	NA	6241519	6201234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202210_6202378_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.111	chr18	-	5608	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	25	-234	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAATACTATGCATAACT	20	True	NA	NA	False	ATTAAA	-22	NA	6241498	6201235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202200_6202364_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.114	chr18	-	5446	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-415	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATTTTTAATCACCTA	-2	True	NA	NA	False	ATTAAA	-19	NA	6241520	6201416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.115	chr18	-	5434	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	14	-415	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATTTTTAATCACCTA	9	True	NA	NA	False	ATTAAA	-19	NA	6241509	6201416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202212_6202380_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.116	chr18	-	5384	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	10	-480	intron_retention	FALSE	non_canonical	0	0	junction_1	373.502804105346	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTCAGTGAACTGAAC	5	True	NA	NA	False	CATAAA	-23	NA	6241513	6201481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224082_6225317_6225443_6225592_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.117	chr18	-	5548	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	3	481	3	-481	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGTGAACTGAA	-2	True	NA	NA	False	CATAAA	-22	NA	6241520	6201482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.118	chr18	-	5762	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-5	-481	intron_retention	FALSE	non_canonical	0	0	junction_1	286.54176938101	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGTGAACTGAA	-10	True	NA	NA	False	CATAAA	-22	NA	6241528	6201482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.120	chr18	-	5379	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-481	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGTGAACTGAA	2	True	NA	NA	False	CATAAA	-22	NA	6241516	6201482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202198_6202362_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.122	chr18	-	5897	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-25	-481	intron_retention	FALSE	canonical	0	0	junction_8	219.268274925692	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGTGAACTGAA	23	True	NA	NA	False	CATAAA	-22	NA	6241495	6201482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.123	chr18	-	6213	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	16	-481	intron_retention	FALSE	canonical	0	0	junction_8	219.473988429659	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTCAGTGAACTGAA	11	True	NA	NA	False	CATAAA	-22	NA	6241507	6201482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.127	chr18	-	5545	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-5	-485	intron_retention	FALSE	canonical	0	0	junction_8	286.101587552394	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTCTTTTCAGTGAAC	-10	True	NA	NA	False	CATAAA	-18	NA	6241528	6201486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214081_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.128	chr18	-	4915	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	26	-891	intron_retention	FALSE	non_canonical	0	0	junction_1	332.905678576383	1300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTTGTAGTCTGCA	21	True	NA	5	True	NA	NA	NA	6241497	6201892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208218_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.129	chr18	-	5149	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-9	892	-9	-892	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTTGTAGTCTGC	-14	True	NA	4	True	NA	NA	NA	6241532	6201893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.13	chr18	-	5862	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-13	-15	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTGAACCTTACTTCA	-18	True	NA	-15	True	AATAAA	-27	NA	6241536	6201016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.130	chr18	-	4965	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-892	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTTGTAGTCTGC	2	True	NA	4	True	NA	NA	NA	6241516	6201893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.133	chr18	-	5134	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-892	intron_retention	FALSE	non_canonical	0	0	junction_8	215.348105169282	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTTGTAGTCTGC	-1	True	NA	4	True	NA	NA	NA	6241519	6201893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213301_6213398_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.137	chr18	-	5170	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	23	-895	intron_retention	FALSE	canonical	0	0	junction_8	329.795983196497	1300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTTGCTGTTGTAGTC	18	True	NA	1	True	NA	NA	NA	6241500	6201896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6230029_6230086_6234814_6234903_6240981
ES.16016.14	chr18	-	5882	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-29	-16	intron_retention	TRUE	non_canonical	0	0	junction_1	324.631543527819	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTGAACCTTACTTC	NA	False	NA	-16	True	AATAAA	-26	NA	6241552	6201017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202198_6202362_6203708_6208184_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.143	chr18	-	4828	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-5	1209	-5	878	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGGAAGGGTCTCAGC	-10	True	NA	NA	False	NA	NA	NA	6241528	6202210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.144	chr18	-	5427	1	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	6903	878	mono-exon	FALSE	NA	NA	NA	NA	NA	1257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGGAAGGGTCTCAGC	9278	False	NA	NA	False	NA	NA	NA	6207637	6202210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6202200_6207600
ES.16016.145	chr18	-	4332	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-1	1701	-1	386	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTATTGACTGATAAA	-6	True	NA	NA	False	ATTAAA	-19	NA	6241524	6202702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.146	chr18	-	4264	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	44	intron_retention	FALSE	canonical	0	0	junction_8	213.906517581604	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGCTGGTATAGTCT	-1	True	NA	NA	False	AATAAA	-35	NA	6241519	6203044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.147	chr18	-	3770	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-8	2270	-8	-183	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTACTTGCCACAAAATAT	-13	True	NA	NA	False	ATTAAA	-25	NA	6241531	6203271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.148	chr18	-	3740	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-215	intron_retention	FALSE	canonical	0	0	junction_8	286.101587552394	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAAATGTCTTAAATTT	2	True	NA	NA	False	ACTAAA	-36	NA	6241516	6203303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214105_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.149	chr18	-	3539	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-404	intron_retention	FALSE	canonical	0	0	junction_8	276.15437421848	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTTGTTACACGGTG	-1	True	NA	NA	False	NA	NA	NA	6241519	6203492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208184_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.150	chr18	-	3434	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	4	2594	4	-507	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTACAGCTGTTTCCTA	-1	True	NA	NA	False	NA	NA	NA	6241519	6203595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.151	chr18	-	3835	26	NNC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	-9	-4385	intron_retention	FALSE	non_canonical	0	0	junction_1	286.630008198723	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGCCACCATTGATTA	-14	True	NA	NA	False	AATAAA	-18	NA	6241532	6207473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207842_6208054_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.152	chr18	-	3707	26	NNC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	-32	-4536	intron_retention	FALSE	non_canonical	0	0	junction_1	286.630008198723	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTATATACTCCCTC	NA	False	NA	NA	False	TATAAA	-18	NA	6241555	6207624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207842_6208054_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.153	chr18	-	3637	26	NNC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	3	-4570	intron_retention	TRUE	non_canonical	0	0	junction_1	286.630008198723	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGCTTCTATAAATGA	-2	True	NA	NA	False	AATAAA	-19	NA	6241520	6207658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207822_6208035_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.156	chr18	-	3633	26	NNC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	4	-4571	intron_retention	FALSE	non_canonical	0	0	junction_1	286.630008198723	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGCTTCTATAAATG	-1	True	NA	NA	False	AATAAA	-18	NA	6241519	6207659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207835_6208050_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.157	chr18	-	3641	26	NNC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	-2	-4571	intron_retention	TRUE	non_canonical	0	0	junction_1	286.630008198723	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGCTTCTATAAATG	-7	True	NA	NA	False	AATAAA	-18	NA	6241525	6207659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207828_6208041_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.158	chr18	-	2543	19	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	10	12252	10	192	5prime_fragment	FALSE	canonical	0	0	junction_1	247.895562438183	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATCAGTAGTTTG	5	True	NA	NA	False	NA	NA	NA	6241513	6213253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.159	chr18	-	3652	10	NIC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	-3629	2453	intron_retention	FALSE	canonical	3	809	junction_8	122.611400593728	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	6227658	6218406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6220293_6220801_6220996_6222718_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587
ES.16016.160	chr18	-	5845	1	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-222	2453	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGGAAGGAAGGAAGG	2714	False	NA	NA	False	NA	NA	NA	6224251	6218406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6218400_6224300
ES.16016.161	chr18	-	4603	8	NIC	ENSMUSG00000006740.15	novel	2006	17	NA	NA	3	-979	intron_retention	FALSE	canonical	3	809	junction_4	114.078562260168	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCATCTCTGCTCTATA	-2	True	NA	NA	False	NA	NA	NA	6241520	6221838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.162	chr18	-	1473	11	ISM	ENSMUSG00000006740.15	ENSMUST00000163210.2	2006	17	-53	8204	0	-1913	intron_retention	FALSE	canonical	3	809	junction_7	115.848867063947	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACGGAACACTATTCAG	-5	True	NA	NA	False	AATAAA	-2	NA	6241523	6222772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.17	chr18	-	4502	19	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	376	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	376.847928362504	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	3312	False	NA	-18	True	AATAAA	-24	NA	6223653	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6202479_6202552_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545
ES.16016.19	chr18	-	5831	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	331.637913425624	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-1	True	NA	-18	True	AATAAA	-24	NA	6241519	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213197_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.22	chr18	-	6094	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-18	intron_retention	FALSE	canonical	0	0	junction_8	213.506110861024	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-2	True	NA	-18	True	AATAAA	-24	NA	6241520	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.24	chr18	-	5979	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-6	-18	intron_retention	FALSE	canonical	0	0	junction_8	285.209946530622	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-11	True	NA	-18	True	AATAAA	-24	NA	6241529	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211064_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.25	chr18	-	5838	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	15	-18	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	10	True	NA	-18	True	AATAAA	-24	NA	6241508	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202364_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.26	chr18	-	5779	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-163	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	333.01445974612	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-27	True	NA	-18	True	AATAAA	-24	NA	6241299	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223688_6223970_6224076_6225317_6225443_6225603_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.28	chr18	-	11634	28	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	448.497436578275	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	2	True	NA	-18	True	AATAAA	-24	NA	6241516	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6207842_6208054_6208336_6208999_6210351_6210396_6210805_6211064_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6239643_6239777_6240981
ES.16016.3	chr18	-	6328	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	4	-300	4	300	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAACGTCTACTTTTTA	-1	True	NA	NA	False	TTTAAA	-16	NA	6241519	6200701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.32	chr18	-	6083	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-13	-18	intron_retention	FALSE	canonical	0	0	junction_8	329.795983196497	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-18	True	NA	-18	True	AATAAA	-24	NA	6241536	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6230029_6230086_6234814_6234903_6240981
ES.16016.33	chr18	-	5806	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	17	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	332.089104122558	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	12	True	NA	-18	True	AATAAA	-24	NA	6241506	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214074_6214520_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.34	chr18	-	5975	28	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	366.915201963749	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	-1	True	NA	-18	True	AATAAA	-24	NA	6241519	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6239643_6239777_6240981
ES.16016.36	chr18	-	5839	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	25	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	20	True	NA	-18	True	AATAAA	-24	NA	6241498	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981_6241125_6241274
ES.16016.37	chr18	-	5797	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	17	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	332.905678576383	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACATTTGAACCTTACT	12	True	NA	-18	True	AATAAA	-24	NA	6241506	6201019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208218_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.4	chr18	-	4454	16	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	2139	213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.384682244272	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCCTTGGTTTTCAACA	6066	False	NA	NA	False	AGTAAA	-15	NA	6220899	6200788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801
ES.16016.40	chr18	-	5854	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-13	-20	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-18	True	NA	-20	True	AATAAA	-22	NA	6241536	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202210_6202380_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.45	chr18	-	4481	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-20	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-1	True	NA	-20	True	AATAAA	-22	NA	6241519	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6201879_6203405_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.46	chr18	-	6110	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-5	-20	intron_retention	FALSE	non_canonical	0	0	junction_8	330.414156465638	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-10	True	NA	-20	True	AATAAA	-22	NA	6241528	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6230029_6230123_6234814_6234903_6240981
ES.16016.5	chr18	-	6146	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	114	intron_retention	FALSE	non_canonical	0	0	junction_8	286.605334214142	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGCTTTTTTGTACT	-2	True	NA	NA	False	NA	NA	NA	6241520	6200887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213391_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226379_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.50	chr18	-	5831	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	326.678571463227	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-2	True	NA	-20	True	AATAAA	-22	NA	6241520	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225675_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.51	chr18	-	6059	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	285.983736600528	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-1	True	NA	-20	True	AATAAA	-22	NA	6241519	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.56	chr18	-	5840	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-20	intron_retention	FALSE	canonical	0	0	junction_1	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-1	True	NA	-20	True	AATAAA	-22	NA	6241519	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202192_6202359_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.58	chr18	-	5384	25	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	346.313679964502	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-1	True	NA	-20	True	AATAAA	-22	NA	6241519	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216294_6220908_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.59	chr18	-	5976	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-20	intron_retention	FALSE	canonical	0	0	junction_1	286.630008198723	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACACATTTGAACCTTA	-1	True	NA	-20	True	AATAAA	-22	NA	6241519	6201021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208218_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.6	chr18	-	6047	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	-13	-2	-13	2	multi-exon	FALSE	canonical	0	0	junction_8	215.348105169282	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACGTATTAGCTTGAT	-18	True	NA	2	True	AATAAA	-44	NA	6241536	6200999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.62	chr18	-	6225	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-8	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	286.54176938101	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-13	True	NA	-21	True	AATAAA	-21	NA	6241531	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.64	chr18	-	5992	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	non_canonical	0	0	junction_8	286.605334214142	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225809_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.65	chr18	-	10102	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	332.905678576383	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	2	True	NA	-21	True	AATAAA	-21	NA	6241516	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6207842_6208054_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.67	chr18	-	5896	24	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	10	-21	intron_retention	FALSE	canonical	0	0	junction_8	291.571635972348	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	5	True	NA	-21	True	AATAAA	-21	NA	6241513	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.7	chr18	-	6414	25	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_8	219.268274925692	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATGACGTATTAGCTT	-14	True	NA	-1	True	AATAAA	-41	NA	6241532	6201002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.71	chr18	-	7046	24	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	17	-21	intron_retention	FALSE	canonical	0	0	junction_8	223.695098659897	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	12	True	NA	-21	True	AATAAA	-21	NA	6241506	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.73	chr18	-	6018	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	non_canonical	0	0	junction_8	280.569204297264	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213388_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225692_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.75	chr18	-	5895	28	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	364.447158225367	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6230029_6230086_6234814_6234903_6240981
ES.16016.76	chr18	-	6227	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	canonical	0	0	junction_8	331.337385481553	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6228869_6229090_6234814_6234903_6240981
ES.16016.77	chr18	-	5936	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	24	-21	intron_retention	FALSE	canonical	0	0	junction_8	331.26843737368	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	19	True	NA	-21	True	AATAAA	-21	NA	6241499	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211064_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225675_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.78	chr18	-	5833	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	281.066818057589	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213398_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.81	chr18	-	6173	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	337.899426457045	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-2	True	NA	-21	True	AATAAA	-21	NA	6241520	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211064_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.82	chr18	-	5919	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	7	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	280.569204297264	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	2	True	NA	-21	True	AATAAA	-21	NA	6241516	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6202204_6202371_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.83	chr18	-	6001	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	canonical	0	0	junction_8	286.525240772955	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234897_6240981
ES.16016.85	chr18	-	4138	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	3	-21	intron_retention	FALSE	canonical	0	0	junction_1	286.630008198723	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-2	True	NA	-21	True	AATAAA	-21	NA	6241520	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6201838_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.87	chr18	-	7566	23	NIC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	12	-21	intron_retention	FALSE	canonical	0	0	junction_8	228.259408213586	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	7	True	NA	-21	True	AATAAA	-21	NA	6241511	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6214088_6214511_6214701_6216222_6216948_6220223_6220293_6220801_6220996_6222718_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.88	chr18	-	10273	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	4	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	286.630008198723	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACACATTTGAACCTT	-1	True	NA	-21	True	AATAAA	-21	NA	6241519	6201022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6207842_6208054_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ES.16016.9	chr18	-	5824	27	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	281.066818057589	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCATGACGTATTAGCT	26	True	NA	-2	True	AATAAA	-40	NA	6241492	6201003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981_6241220_6241394
ES.16017.1	chr18	+	156	1	Intergenic	novelGene_13356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	6243191	6243347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6243200_6243300
ES.16018.1	chr18	+	175	1	Intergenic	novelGene_13357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAATTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	6249559	6249734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6249600_6249700
ES.16019.1	chr18	+	158	1	Intergenic	novelGene_13358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6286640	6286798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6286600_6286800
ES.1602.1	chr1	-	174	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	152984313	152984139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_152984100_152984300
ES.16020.1	chr18	-	185	1	Intergenic	novelGene_13359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACAAAGCTTGC	NA	False	NA	NA	False	NA	NA	NA	6296495	6296310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_6296300_6296500
ES.16021.1	chr18	+	474	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	-41	-22	-41	22	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	6332590	6333064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6332600_6333100
ES.16022.1	chr18	+	156	1	Intergenic	novelGene_13360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAGTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	6458709	6458865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6458700_6458900
ES.16022.2	chr18	+	400	1	Intergenic	novelGene_13361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACACACACTTTCCA	NA	False	NA	NA	False	NA	NA	NA	6458710	6459110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6458700_6459100
ES.16023.1	chr18	+	1443	2	FSM	ENSMUSG00000101320.2	ENSMUST00000189675.2	670	2	-15	-758	-3	758	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTTTGTTTTGTTT	-10	True	NA	NA	False	ATTAAA	-14	NA	6490139	6491882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6490235_6490534
ES.16023.2	chr18	+	1740	1	NIC	ENSMUSG00000101320.2	novel	387	2	NA	NA	3	761	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTG	-4	True	NA	NA	False	ATTAAA	-17	NA	6490145	6491885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6490100_6491900
ES.16024.1	chr18	+	6499	1	Intergenic	novelGene_13362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGGTAATACAGAAG	7831	False	NA	NA	False	AATAAA	-18	NA	6497980	6504479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6498000_6504500
ES.16025.1	chr18	+	2382	1	Intergenic	novelGene_13363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	6508763	6511145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6508800_6511100
ES.16026.1	chr18	-	4240	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-273	-2	-273	0	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	NA	False	NA	1	True	AATAAA	-29	NA	6491129	6435950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.10	chr18	-	3956	14	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	15.4777947452961	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGCAGTGGTCTTTGC	10	True	NA	-2	True	AATAAA	-26	NA	6490903	6435953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440103_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.11	chr18	-	6247	14	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-49	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.2225644592073	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGCAGTGGTCTTTGC	8	True	NA	-2	True	AATAAA	-26	NA	6490905	6435953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437527_6437576_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.12	chr18	-	3874	14	FSM	ENSMUSG00000024240.14	ENSMUST00000115870.9	3817	14	-60	3	-60	-1	multi-exon	FALSE	canonical	1	5	junction_13	15.1118120655772	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGCAGTGGTCTTTGC	NA	False	NA	-2	True	AATAAA	-26	NA	6516168	6435953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
ES.16026.13	chr18	-	4096	15	NNC	ENSMUSG00000024240.14	novel	3817	14	NA	NA	725	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	20.5162951662072	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGCAGTGGTCTTTGC	782	False	NA	-2	True	AATAAA	-26	NA	6490131	6435953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6489212_6489331_6489723
ES.16026.14	chr18	-	3882	15	NNC	ENSMUSG00000024240.14	novel	3817	14	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	23.0770669801897	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACGTGCAGTGGTCTTTG	31	False	NA	-3	True	AATAAA	-25	NA	6516066	6435954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
ES.16026.17	chr18	-	3590	14	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	4	-367	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	15.8252289026884	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTTTAAAGACTTCAT	-14	True	NA	NA	False	AAAAAG	-19	NA	6490852	6436319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454390_6455188_6455335_6462831_6462992_6490462
ES.16026.18	chr18	-	3023	14	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	69	-679	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.9737210227802	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGTTTTTTAAAACG	-2	True	NA	NA	False	NA	NA	NA	6490787	6436631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439785_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.19	chr18	-	3342	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-56	679	-56	-679	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGTTTTTTAAAACG	1	True	NA	NA	False	NA	NA	NA	6490912	6436631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.2	chr18	-	3202	10	NIC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	19.0813722104072	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	-19	True	NA	1	True	AATAAA	-29	NA	6490857	6435950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.20	chr18	-	3409	13	NIC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-30	-679	intron_retention	FALSE	canonical	3	46	junction_12	5.99247212944893	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGTTTTTTAAAACG	1	True	NA	NA	False	NA	NA	NA	6490886	6436631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6437308_6439591_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.21	chr18	-	3380	15	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	17	-679	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	19.9720467919847	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGTTTTTTAAAACG	-1	True	NA	NA	False	NA	NA	NA	6490839	6436631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.22	chr18	-	3385	15	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-33	-690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.974839154354	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGCATCAGT	-2	True	NA	NA	False	NA	NA	NA	6490889	6436642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6442943_6443021_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.23	chr18	-	3131	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	37	797	37	-797	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGGTATTTTGTAAATG	19	True	NA	NA	False	AGTAAA	-21	NA	6490819	6436749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.24	chr18	-	2400	10	NIC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-1	-800	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	19.0813722104072	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTTGGTATTTTGTAA	-19	True	NA	NA	False	AGTAAA	-18	NA	6490857	6436752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.25	chr18	-	2513	13	ISM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	7	3729	7	-90	5prime_fragment	FALSE	canonical	3	46	junction_12	5.99247212944893	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCGCCATCTGCCTTAA	-11	True	NA	NA	False	AATAAA	-31	NA	6490849	6439681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.26	chr18	-	2353	13	ISM	ENSMUSG00000024240.14	ENSMUST00000115870.9	3817	14	11	3737	11	-96	5prime_fragment	FALSE	canonical	1	5	junction_12	15.4569294061488	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGTTCCGCCATCTG	0	True	NA	NA	False	AATAAA	-25	NA	6516097	6439687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
ES.16026.27	chr18	-	2492	14	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	123	-106	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	20.3181791105124	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGACTTTAAGTGCTGTT	-13	True	NA	NA	False	AATAAA	-15	NA	6490733	6439697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.28	chr18	-	2269	10	ISM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	-6	12671	-6	-9032	5prime_fragment	FALSE	canonical	3	46	junction_9	6.19039478985961	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTTAGTGGTATGTAC	-24	True	NA	NA	False	AATAAA	-15	NA	6490862	6448623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.29	chr18	-	2209	1	FSM	ENSMUSG00000084514.2	ENSMUST00000122565.2	83	1	-448	-1678	-448	1678	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTTGTTTTATTTTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	6491094	6488885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6488900_6491100
ES.16026.3	chr18	-	4092	15	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.0422315880251	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	1	True	NA	1	True	AATAAA	-29	NA	6490912	6435950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.30	chr18	-	953	2	FSM	ENSMUSG00000024240.14	ENSMUST00000050542.6	565	2	-120	-268	-120	268	multi-exon	FALSE	canonical	3	18	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGTCTTTTTGTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	6490976	6488891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6489331_6490462
ES.16026.31	chr18	-	8643	1	Antisense	novelGene_ENSMUSG00000101320.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGAAGGAAGGAA	6713	False	NA	NA	False	NA	NA	NA	6504005	6495362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_6495400_6504000
ES.16026.4	chr18	-	6453	13	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	27	0	intron_retention	FALSE	canonical	1	2	junction_5	21.1180544137528	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	9	True	NA	-1	True	AATAAA	-27	NA	6490829	6435952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6450218_6450296_6450387_6450465_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.5	chr18	-	6780	13	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_5	20.9342555529342	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	-13	True	NA	-1	True	AATAAA	-27	NA	6490851	6435952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ES.16026.6	chr18	-	4081	15	NNC	ENSMUSG00000024240.14	novel	3965	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	23.0860192695555	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	48	False	6490887	-1	True	AATAAA	-27	NA	6490865	6435952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6441801_6441913_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454390_6455188_6455335_6462831_6462992_6490462
ES.16027.1	chr18	-	2805	3	Intergenic	novelGene_13364	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTCTAATTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	6675680	6662461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_6663827_6669140_6670367_6675466
ES.16028.1	chr18	+	361	2	Intergenic	novelGene_13365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTAATAGTTTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	6676424	6686465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6676481_6686160
ES.16029.1	chr18	+	1747	1	Intergenic	novelGene_13366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6692679	6694426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_6692700_6694400
ES.1603.1	chr1	+	182	1	Antisense	novelGene_ENSMUSG00000026479.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGAAAGGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	153034256	153034438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153034300_153034400
ES.16030.1	chr18	-	178	1	Intergenic	novelGene_13367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGCCTTCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	6759880	6759702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_6759700_6759900
ES.16031.1	chr18	+	2507	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	-99	4107	-99	1082	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGTGTCTAGAGAGGT	3	True	NA	100	True	AATATA	-15	NA	6765045	6790322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.10	chr18	+	6458	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	56	1	-2	-1	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATTGATTTATTCAG	5	True	NA	NA	False	CATAAA	-22	NA	6765200	6794428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.12	chr18	+	1214	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	62	5239	4	-50	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTATTTGTTCTGAT	11	True	NA	NA	False	AGTAAA	-40	NA	6765206	6789190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.14	chr18	+	2206	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	62	4247	4	942	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTGTCTTGTCTGT	11	True	NA	18	True	ATTAAA	-15	NA	6765206	6790182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.15	chr18	+	2221	7	FSM	ENSMUSG00000073639.7_ENSMUSG00000117461.2	ENSMUST00000234626.2	729	7	-3	-1489	-3	942	multi-exon	FALSE	canonical	0	0	junction_2	405.244781993961	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTGTCTTGTCTGT	14	True	NA	18	True	ATTAAA	-15	NA	6765209	6790182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778476_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.18	chr18	+	5631	9	NNC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	14	-4	intron_retention	FALSE	canonical	1	1	junction_8	515.021586319447	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATGCATTGATTTATT	-7	True	NA	NA	False	CATAAA	-19	NA	6765233	6794425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_6765333_6770053_6770110_6777666_6777698_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479_6791235_6792056
ES.16031.19	chr18	+	1757	8	NNC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	22	497	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	481.153376199909	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGTTTTCTAACTC	1	True	NA	15	True	AATAAA	-11	NA	6765241	6789737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_6765333_6770053_6770110_6777666_6777698_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.2	chr18	+	2014	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	41	4460	-17	729	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGGATTGATTTCTTT	-10	True	NA	29	True	GATAAA	-39	NA	6765185	6789969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.21	chr18	+	3585	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	102	2828	27	2361	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATCTGGCTTTTGTTT	6	True	NA	NA	False	AATAAA	-18	NA	6765246	6791601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.22	chr18	+	1922	7	NNC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	31	709	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	392.386466240732	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGTTACTGGGTT	10	True	NA	9	True	GATAAA	-19	NA	6765250	6789949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_6765333_6770053_6770110_6778494_6778557_6783126_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.24	chr18	+	2084	6	ISM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	4907	4245	4832	944	3prime_fragment	FALSE	canonical	3	943	junction_5	109.078687194154	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGTCTTGTCTGTCT	4762	False	NA	20	True	ATTAAA	-17	NA	6770051	6790184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.25	chr18	+	5062	3	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	16177	942	intron_retention	FALSE	canonical	3	943	junction_2	8	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTGTCTTGTCTGT	NA	False	NA	18	True	ATTAAA	-15	NA	6781396	6790182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6784689_6784938_6785006_6788479
ES.16031.26	chr18	+	2137	1	ISM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	23679	3469	23604	1720	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGACTTAGTGATAATT	NA	False	NA	NA	False	ACTAAA	-18	NA	6788823	6790960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_6788800_6791000
ES.16031.3	chr18	+	3276	6	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	-17	614	intron_retention	FALSE	canonical	3	943	junction_5	109.078687194154	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTATTGTCCCTTATT	-10	True	NA	-86	True	AGTAAA	-16	NA	6765185	6789854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6784689_6784938_6785006_6788479
ES.16031.4	chr18	+	2063	8	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	-17	705	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	485.136463023655	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATATGTGTGTTACTG	-10	True	NA	5	True	GATAAA	-15	NA	6765185	6789945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6765333_6767643_6767717_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.5	chr18	+	5650	8	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	1	junction_7	385.553405602166	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATTGATTTATTCAG	-9	True	NA	NA	False	CATAAA	-22	NA	6765186	6794428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479_6791235_6792056
ES.16031.6	chr18	+	1794	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	44	4677	-14	512	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTTGTTGCCGTACAG	-7	True	NA	30	True	AATAAA	-26	NA	6765188	6789752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.7	chr18	+	1650	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	49	4816	-9	373	multi-exon	FALSE	canonical	3	943	junction_6	99.6015673683011	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGTTCCAAATTCTGA	-2	True	NA	NA	False	ACTAAA	-18	NA	6765193	6789613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.8	chr18	+	2327	8	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	-2	984	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	485.136463023655	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGAGTCATGCTGTCG	5	True	NA	2	True	NA	NA	NA	6765200	6790224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6765333_6767643_6767717_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16031.9	chr18	+	1705	6	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	-2	497	combination_of_known_splicesites	FALSE	canonical	2	125	junction_2	359.805169501496	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCAGTTTTCTAACTC	5	True	NA	15	True	AATAAA	-11	NA	6765200	6789737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_6765333_6770053_6770110_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ES.16032.1	chr18	-	3211	7	FSM	ENSMUSG00000061013.7	ENSMUST00000079788.7	3650	7	1	438	1	-438	multi-exon	FALSE	canonical	2	10	junction_4	2.3392781412697	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGGTTGTATTTTATT	NA	False	NA	NA	False	AATAAA	-39	NA	7004779	6934955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_6937055_6937167_6937202_6992037_6992374_6992777_6992935_7000592_7000753_7002356_7002624_7004621
ES.16032.2	chr18	-	136	1	Intergenic	novelGene_13368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	4873	False	NA	NA	False	NA	NA	NA	6978732	6978596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_6978600_6978700
ES.16033.1	chr18	+	157	1	Intergenic	novelGene_13369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAAATAAATTA	1878	False	NA	NA	False	NA	NA	NA	7182978	7183135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7183000_7183100
ES.16034.1	chr18	+	178	1	Intergenic	novelGene_13370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATGTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7264095	7264273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7264100_7264300
ES.16034.2	chr18	+	356	1	Intergenic	novelGene_13371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	7264097	7264453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7264100_7264500
ES.16035.1	chr18	+	7943	2	Intergenic	novelGene_13372	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	7318906	7326891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7326548_7326589
ES.16036.1	chr18	+	2786	1	Antisense	novelGene_ENSMUSG00000057440.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTCCTGGATGAGGTG	NA	False	NA	NA	False	NA	NA	NA	7456558	7459344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_7456600_7459300
ES.16037.1	chr18	+	2566	1	Intergenic	novelGene_13374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTGTTGGTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	7537947	7540513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7537900_7540500
ES.16038.1	chr18	-	4992	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	-11	0	-11	0	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-33	True	NA	NA	False	ATTAAA	-20	NA	7626877	7347958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ES.16038.10	chr18	-	5515	18	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	34.980864764239	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-33	True	NA	NA	False	AATAAA	-17	NA	7626877	7348110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7562037_7562709_7626728
ES.16038.13	chr18	-	4673	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	-147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.9193032764388	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-33	True	NA	NA	False	AATAAA	-17	NA	7626877	7348110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.14	chr18	-	3638	6	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	53045	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.0766758234662	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	7413128	7348110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7412952
ES.16038.16	chr18	-	4710	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	-149	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	26.6329787210435	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCTTGAAAGTTGT	-33	True	NA	NA	False	AATAAA	-15	NA	7626877	7348112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.17	chr18	-	4674	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-1	-149	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	27.6706021297373	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCTTGAAAGTTGT	-16	True	NA	NA	False	AATAAA	-15	NA	7626860	7348112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7626732
ES.16038.18	chr18	-	4764	16	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-49604	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.6706021297373	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGCTTGAAAGTTGT	0	True	NA	NA	False	AATAAA	-15	NA	7515777	7348112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7515559
ES.16038.20	chr18	-	4885	18	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-4	-155	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	33.738563357669	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	1615	False	NA	NA	False	AATAAA	-9	NA	7608986	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607884_7608010_7608913
ES.16038.21	chr18	-	4952	18	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-6	-155	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	34.3661336473644	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-28	True	NA	NA	False	AATAAA	-9	NA	7626872	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607884_7608010_7626732
ES.16038.22	chr18	-	2255	18	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-10	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4110441405704	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-32	True	NA	NA	False	AATAAA	-9	NA	7626876	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7348406_7350985_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.23	chr18	-	4850	17	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-6	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.1727689976565	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-28	True	NA	NA	False	AATAAA	-9	NA	7626872	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458912_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.24	chr18	-	4688	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-13	-155	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	35.0421967855264	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	1606	False	NA	NA	False	AATAAA	-9	NA	7608995	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7608913
ES.16038.25	chr18	-	4820	17	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-49600	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	35.6672446896308	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	4	True	NA	NA	False	AATAAA	-9	NA	7515773	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7514885_7514952_7515559
ES.16038.29	chr18	-	4824	17	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-10	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	26.9672834189875	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATATCTGCTTGAA	-32	True	NA	NA	False	AATAAA	-9	NA	7626876	7348118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443984_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.3	chr18	-	4804	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.9193032764388	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-12	True	NA	NA	False	ATTAAA	-20	NA	7626856	7347958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.30	chr18	-	4272	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-82	-721	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	26.6079757779505	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGGCATGTAGCCTTA	1537	False	NA	NA	False	AATAAA	-28	NA	7609064	7348684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7608913
ES.16038.31	chr18	-	4227	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	22	732	10	-727	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATCAGGTGGCATGTA	0	True	NA	NA	False	AATAAA	-22	NA	7626844	7348690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ES.16038.32	chr18	-	2657	12	ISM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	182837	1689	22144	-1684	3prime_fragment	FALSE	canonical	3	91	junction_8	9.67146266511145	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTGAGATATTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	7444029	7349647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973
ES.16038.33	chr18	-	4830	13	NIC	ENSMUSG00000057440.9	novel	1784	13	NA	NA	0	3044	combination_of_known_junctions	FALSE	canonical	3	86	junction_12	11.6856987619721	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAGAAGAATTGT	-15	True	NA	NA	False	NA	NA	NA	7626859	7376603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.34	chr18	-	2403	1	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-49286	1771	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7403952	7401549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7401500_7404000
ES.16038.35	chr18	-	178	1	Intergenic	novelGene_13373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTCTTATGAA	NA	False	NA	NA	False	NA	NA	NA	7421948	7421770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7421800_7421900
ES.16038.36	chr18	-	3384	1	NIC	ENSMUSG00000057440.9	novel	3001	16	NA	NA	-3	16698	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGATTGAAATTGATTT	1627	False	NA	NA	False	AATAAA	-17	NA	7608974	7605590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7605600_7609000
ES.16038.37	chr18	-	175	1	Intergenic	novelGene_13375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAAAATTAATTTA	NA	False	NA	NA	False	NA	NA	NA	7614873	7614698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7614700_7614900
ES.16038.38	chr18	-	171	1	Intergenic	novelGene_13376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATAAAGTCTG	5458	False	NA	NA	False	NA	NA	NA	7621386	7621215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7621200_7621400
ES.16038.4	chr18	-	5221	20	NNC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-79	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	46.7297884672497	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	1540	False	NA	NA	False	ATTAAA	-20	NA	7609061	7347958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403353_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607455_7607615_7607884_7608010_7608913_7608951_7609004
ES.16038.5	chr18	-	5103	18	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_17	33.8940951875296	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-15	True	NA	NA	False	ATTAAA	-20	NA	7626859	7347958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607884_7608010_7626728
ES.16038.6	chr18	-	4947	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	40.1682010426158	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGCTTTCAAGATTA	-33	True	NA	NA	False	ATTAAA	-17	NA	7626877	7347961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7607884_7608010_7626728
ES.16038.7	chr18	-	4846	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	-11	-145	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTTGAAAGTTGTTTAG	-33	True	NA	NA	False	AATAAA	-19	NA	7626877	7348108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16038.9	chr18	-	4739	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	1	-147	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	26.2461849079485	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-9	True	NA	NA	False	AATAAA	-17	NA	7626853	7348110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
ES.16039.1	chr18	+	1333	1	Intergenic	novelGene_13377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	7732637	7733970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7732600_7734000
ES.1604.1	chr1	-	5265	24	NNC	ENSMUSG00000026479.14	novel	5164	24	NA	NA	-169	313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.5865671008056	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTAAGGCCTCAATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	153061962	152998188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153005993_153006093_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061886
ES.1604.11	chr1	-	4989	23	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	10945	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_22	23.8206105631931	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGTTTCTGATTTTA	NA	False	NA	-3	True	AATAAA	-17	NA	153050848	152998503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153050634
ES.1604.13	chr1	-	6942	21	NIC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	0	-3	intron_retention	FALSE	canonical	1	4	junction_20	25.7068084366768	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGAGTTTCTGATTTT	NA	False	NA	-4	True	AATAAA	-16	NA	153061793	152998504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153030237_153034597_153034734_153061654
ES.1604.15	chr1	-	3204	13	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	11035	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	32.3963089461336	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGAGTTTCTGATTT	NA	False	NA	-5	True	AATAAA	-15	NA	153016797	152998505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153016731
ES.1604.17	chr1	-	5090	24	FSM	ENSMUSG00000026479.14	ENSMUST00000027753.13	5164	24	70	4	70	-4	multi-exon	FALSE	canonical	1	4	junction_23	24.3679264856456	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGAGTTTCTGATTT	NA	False	NA	-5	True	AATAAA	-15	NA	153062123	152998505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654_153061848_153061999
ES.1604.20	chr1	-	4869	23	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	25.3670981671433	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGGCTGAGTTTCTG	NA	False	NA	-9	True	AATAAA	-11	NA	153061774	152998509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009364_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.21	chr1	-	3421	14	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	10190	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.4437602581434	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGGCTGAGTTTCTG	NA	False	NA	-9	True	AATAAA	-11	NA	153017642	152998509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153017601
ES.1604.22	chr1	-	5111	24	NNC	ENSMUSG00000026479.14	novel	5164	24	NA	NA	-104	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.4168891499058	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGGCTGAGTTTCTG	NA	False	NA	-9	True	AATAAA	-11	NA	153061897	152998509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153005993_153006093_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.26	chr1	-	4758	23	NNC	ENSMUSG00000026479.14	novel	5164	24	NA	NA	-178	-333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.4714229761463	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCATGTGATATTTATTG	NA	False	NA	NA	False	NA	NA	NA	153061971	152998834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002908_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.27	chr1	-	1252	7	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	-4596	333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.5570794973519	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGCAGTGAGGCAGAT	NA	False	NA	NA	False	AATATA	-18	NA	153007576	152999585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007492
ES.1604.28	chr1	-	2627	15	NNC	ENSMUSG00000026479.14	novel	2255	4	NA	NA	-198	-9537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.5115549594597	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTGATTCCCCATTT	NA	False	NA	NA	False	NA	NA	NA	153061991	153011380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153011521_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.29	chr1	-	3346	14	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	0	-9545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	25.2872257668224	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTGTTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	153061793	153011388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021500_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.3	chr1	-	4884	23	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.1900216372008	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153061774	152998501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002649_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.30	chr1	-	3454	15	NNC	ENSMUSG00000026479.14	novel	2255	4	NA	NA	-171	-9545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.1971763244125	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATTGTTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	153061964	153011388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153011832_153011888_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026609_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.32	chr1	-	2872	14	ISM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	-182	13541	-182	-10199	5prime_fragment	FALSE	canonical	3	71	junction_5	9.88693477726746	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTCTGATGGAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	153061975	153012042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ES.1604.33	chr1	-	187	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTTAAAACTATTGT	NA	False	NA	NA	False	AATAAA	-8	NA	153025917	153025730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153025700_153025900
ES.1604.4	chr1	-	4899	22	NIC	ENSMUSG00000026479.14	novel	5164	24	NA	NA	-172	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_21	25.0933856730244	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153061965	152998501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153061654
ES.1604.9	chr1	-	2334	7	NNC	ENSMUSG00000026479.14	novel	4916	23	NA	NA	-4596	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.5570794973519	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGAGTTTCTGATTTTA	NA	False	NA	-3	True	AATAAA	-17	NA	153007576	152998503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007492
ES.16040.1	chr18	-	3435	1	Intergenic	novelGene_13378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7854985	7851550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7851600_7855000
ES.16041.1	chr18	-	4083	2	Intergenic	novelGene_13379	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAACATTAAAAAAAA	6142	False	NA	NA	False	NA	NA	NA	7862950	7856666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7858990_7861190
ES.16042.1	chr18	+	3616	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-382	3	combination_of_known_junctions	TRUE	canonical	3	106	junction_6	160.217733794428	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7868449	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.10	chr18	+	3102	14	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	176.051733924297	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	-4	True	NA	NA	False	AATAAA	-8	NA	7868838	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916030_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.100	chr18	+	3065	12	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	-21	6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	228.437415701898	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGCTTTTTTTTTTTT	333	False	NA	NA	False	AATAAA	-28	NA	7869694	7927525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.101	chr18	+	4670	12	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-11	6	intron_retention	FALSE	canonical	3	380	junction_5	66.516387094205	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTTTGTTACTTTTTT	343	False	NA	NA	False	AATAAA	-14	NA	7869704	7927073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.102	chr18	+	3020	14	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	194.88442941498	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	-2	True	NA	NA	False	AATAAA	-8	NA	7869715	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.103	chr18	+	2699	13	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	185.767925708994	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	-1	True	NA	NA	False	AATAAA	-15	NA	7869716	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.104	chr18	+	4952	14	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	6	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	194.88442941498	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGCAGTTATTTCAGA	25	False	NA	NA	False	AATAAA	-15	NA	7869742	7929026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.105	chr18	+	7994	1	Intergenic	novelGene_13381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAGTTATTACCTGGAG	NA	False	NA	NA	False	NA	NA	NA	7887823	7895817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_7887800_7895800
ES.16042.106	chr18	+	3998	11	ISM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	31243	0	-5382	0	3prime_fragment	FALSE	canonical	3	380	junction_3	66.5195459996534	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	NA	False	NA	NA	False	AATAAA	-8	NA	7900092	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.107	chr18	+	6655	8	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-1821	3	intron_retention	FALSE	canonical	3	380	junction_1	76.658532546905	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	2155	False	NA	NA	False	AATAAA	-25	NA	7903653	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.108	chr18	+	6472	1	NIC	ENSMUSG00000024283.16	novel	2205	13	NA	NA	-763	18	mono-exon	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTTTTTTGAACAT	4388	False	NA	NA	False	AATAAA	-18	NA	7909837	7916309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7909800_7916300
ES.16042.109	chr18	+	1145	5	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	9594	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	247.853157131395	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	4090	False	NA	NA	False	AATAAA	-8	NA	7920212	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7920251_7921421_7921609_7921855_7921984_7926069_7926792_7926997
ES.16042.11	chr18	+	3093	14	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	211.203511043077	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	-4	True	NA	NA	False	AATAAA	-15	NA	7868838	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7869990_7870028_7871531_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.12	chr18	+	2797	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-6	7	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	204.401905296621	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	-4	True	NA	NA	False	AATAAA	-15	NA	7868838	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.13	chr18	+	5077	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_1	120.578092491501	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	2	True	NA	NA	False	AATAAA	-22	NA	7868844	7927519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.14	chr18	+	4631	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	1	7	intron_retention	FALSE	canonical	3	146	junction_1	120.578092491501	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	3	True	NA	NA	False	AATAAA	-15	NA	7868845	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.15	chr18	+	3879	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	149.506288086872	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	3	True	NA	NA	False	AATAAA	-15	NA	7868845	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.16	chr18	+	3072	14	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	172.08292345372	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	3	True	NA	NA	False	AATAAA	-15	NA	7868845	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.17	chr18	+	3519	14	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	209.156236724958	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	3	True	NA	NA	False	AATAAA	-25	NA	7868845	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901493_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.18	chr18	+	4045	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	148.588745820857	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGCTTTTTTTTTTTT	5	True	NA	NA	False	AATAAA	-28	NA	7868847	7927525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.19	chr18	+	4331	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	1	7	intron_retention	FALSE	canonical	3	146	junction_1	121.844390743093	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	8	True	NA	NA	False	AATAAA	-15	NA	7868850	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.2	chr18	+	3802	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-277	-455	-259	3	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	89	False	NA	NA	False	AATAAA	-25	NA	7868572	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.20	chr18	+	4605	12	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	6	7	intron_retention	FALSE	non_canonical	0	0	junction_1	161.461711552679	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	13	True	NA	NA	False	AATAAA	-15	NA	7868855	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7871527_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.21	chr18	+	3528	13	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.734980673322	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	13	True	NA	NA	False	AATAAA	-25	NA	7868855	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869108_7871518_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.22	chr18	+	4465	12	NIC	ENSMUSG00000024283.16	novel	1608	13	NA	NA	8	5	intron_retention	FALSE	canonical	3	106	junction_6	167.23868230617	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGCTTTTTTTTTTT	15	True	NA	NA	False	AATAAA	-27	NA	7868857	7927524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.23	chr18	+	3086	14	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	174.14626920185	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	15	True	NA	NA	False	AATAAA	-15	NA	7868857	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7869990_7870028_7871531_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.24	chr18	+	3338	15	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	205.683777499662	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	15	True	NA	NA	False	AATAAA	-15	NA	7868857	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903234_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.25	chr18	+	3589	15	NNC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	206.281868286269	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGCTTTTTTTTTTT	15	True	NA	NA	False	AATAAA	-27	NA	7868857	7927524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7908957_7909028_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.26	chr18	+	2760	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	8	7	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	15	True	NA	NA	False	AATAAA	-15	NA	7868857	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.28	chr18	+	5921	11	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	10	-3	intron_retention	FALSE	canonical	3	106	junction_6	169.895291282601	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	17	True	NA	NA	False	AATAAA	-19	NA	7868859	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7921609_7921855_7921984_7926069
ES.16042.29	chr18	+	3809	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	44	-783	44	331	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTTTGCTGAAGCAC	11	False	NA	NA	False	AATAAA	-15	NA	7868893	7927850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.30	chr18	+	3401	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-145	1952	-14	9	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTACTTTTTTTCC	169	False	NA	NA	False	AATAAA	-17	NA	7869051	7927076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.31	chr18	+	3333	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-58	9	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	152.096862628069	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTACTTTTTTTCC	255	False	NA	NA	False	AATAAA	-17	NA	7869137	7927076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.32	chr18	+	4562	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-51	-715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	152.096862628069	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGCATGTGTCTGGCTCC	-1	True	NA	NA	False	AGTAAA	-20	NA	7869144	7928313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871531_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.33	chr18	+	4526	10	ISM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-52	7788	-51	-250	intron_retention	FALSE	canonical	3	380	junction_6	70.6285711431882	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGTTGAGTAATACATTA	-1	True	NA	NA	False	AATAAA	-18	NA	7869144	7921240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432
ES.16042.34	chr18	+	3445	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-348	-3	-51	3	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	-1	True	NA	NA	False	AATAAA	-25	NA	7869144	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.35	chr18	+	5259	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-51	0	-50	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	0	True	NA	NA	False	AATAAA	-17	NA	7869145	7929028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.36	chr18	+	3313	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-49	7	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	193.341620580052	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	1	True	NA	NA	False	AATAAA	-15	NA	7869146	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.37	chr18	+	3405	13	NIC	ENSMUSG00000024283.16	novel	3094	13	NA	NA	-49	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	181.947546623257	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	1	True	NA	NA	False	AATAAA	-25	NA	7869146	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.38	chr18	+	2997	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-346	443	-49	9	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTACTTTTTTTCC	1	True	NA	NA	False	AATAAA	-17	NA	7869146	7927076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.39	chr18	+	3769	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-48	3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	152.096862628069	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	2	True	NA	NA	False	AATAAA	-25	NA	7869147	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.4	chr18	+	3285	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-206	-9	-188	9	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTACTTTTTTTCC	160	False	NA	NA	False	AATAAA	-17	NA	7868643	7927076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.41	chr18	+	3725	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.710518952203	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	7869148	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869578_7869990_7870028_7871529_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.43	chr18	+	3272	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-24	9	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	148.588745820857	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTACTTTTTTTCC	-13	True	NA	NA	False	AATAAA	-17	NA	7869171	7927076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.44	chr18	+	3541	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.532607657073	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACATTTTGTTACTTTT	-7	True	NA	NA	False	AATAAA	-12	NA	7869177	7927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.45	chr18	+	3847	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	189.765806257318	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	-1	True	NA	NA	False	AATAAA	-19	NA	7869183	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7912132_7912271_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.46	chr18	+	3396	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	189.765806257318	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	1	True	NA	NA	False	AATAAA	-8	NA	7869185	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7912132_7912271_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.49	chr18	+	2929	11	ISM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-8	7791	-7	-253	5prime_fragment	FALSE	canonical	3	380	junction_6	70.7556358179333	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGCTGTTGAGTAATACA	4	True	NA	NA	False	AATAAA	-15	NA	7869188	7921237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131
ES.16042.5	chr18	+	5077	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	-47	-1960	-29	-1	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGCAGTTATTTCAGAA	319	False	NA	NA	False	AATAAA	-16	NA	7868802	7929027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.51	chr18	+	3224	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-7	7	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.918748914632	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	4	True	NA	NA	False	AATAAA	-15	NA	7869188	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.53	chr18	+	3535	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.532607657073	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	7	True	NA	NA	False	AATAAA	-8	NA	7869191	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903248_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.54	chr18	+	3409	13	NIC	ENSMUSG00000024283.16	novel	3094	13	NA	NA	-4	-4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	186.62596282404	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGCTACCTTGGCTT	7	True	NA	NA	False	AATAAA	-18	NA	7869191	7927515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.55	chr18	+	3238	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.710518952203	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	7	True	NA	NA	False	AATAAA	-15	NA	7869191	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869578_7869990_7870028_7871531_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.56	chr18	+	3671	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.918748914632	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGCTTTTTTTTTTTT	8	True	NA	NA	False	AATAAA	-28	NA	7869192	7927525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.57	chr18	+	5055	12	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-3	7	intron_retention	FALSE	canonical	3	380	junction_6	71.9555648006818	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	8	True	NA	NA	False	AATAAA	-15	NA	7869192	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921984_7926069
ES.16042.58	chr18	+	3517	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	219.542764650088	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACATTTTGTTACTTTT	8	True	NA	NA	False	AATAAA	-12	NA	7869192	7927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.60	chr18	+	3989	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	219.189241226361	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTACCTTGGCTTTT	9	True	NA	NA	False	AATAAA	-20	NA	7869193	7927517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.61	chr18	+	3621	14	NNC	ENSMUSG00000024283.16	novel	1965	14	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.438332789721	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGCTTTTTTTTTTTT	11	True	NA	NA	False	AATAAA	-28	NA	7869195	7927525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.62	chr18	+	2934	13	NIC	ENSMUSG00000024283.16	novel	3094	13	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	184.547569898808	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACATTTTGTTACTTTT	11	True	NA	NA	False	AATAAA	-12	NA	7869195	7927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.63	chr18	+	3998	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	219.189241226361	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	11	True	NA	NA	False	AATAAA	-19	NA	7869195	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7902964_7903248_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.64	chr18	+	3209	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	217.619096142588	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	12	True	NA	NA	False	AATAAA	-8	NA	7869196	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.65	chr18	+	3687	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.241029229386	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGCTTTTTTTTTTT	12	True	NA	NA	False	AATAAA	-27	NA	7869196	7927524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871749_7901516_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.66	chr18	+	4489	10	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	-253	intron_retention	FALSE	non_canonical	0	0	junction_2	163.784712652816	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGCTGTTGAGTAATACA	12	True	NA	NA	False	AATAAA	-15	NA	7869196	7921237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432
ES.16042.67	chr18	+	2956	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	186.62596282404	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	12	True	NA	NA	False	AATAAA	-8	NA	7869196	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.68	chr18	+	4951	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	-3	intron_retention	FALSE	canonical	3	380	junction_6	71.739110671934	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	12	True	NA	NA	False	AATAAA	-19	NA	7869196	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.7	chr18	+	4754	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	334	False	NA	NA	False	AATAAA	-17	NA	7868817	7929028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.70	chr18	+	4509	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	7	intron_retention	FALSE	canonical	3	380	junction_6	71.739110671934	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTTACTTTTTTT	12	True	NA	NA	False	AATAAA	-15	NA	7869196	7927074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.72	chr18	+	3710	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	196.847251026491	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	12	True	NA	NA	False	AATAAA	-25	NA	7869196	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871528_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.74	chr18	+	3228	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	153.381876373971	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	15	True	NA	NA	False	AATAAA	-8	NA	7869199	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905415_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.75	chr18	+	3964	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	214.12595234905	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	15	True	NA	NA	False	AATAAA	-22	NA	7869199	7927519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921424_7921609_7921855_7921984_7926069
ES.16042.77	chr18	+	4936	12	NIC	ENSMUSG00000024283.16	novel	3094	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	106	junction_6	133.88887707707	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTACCTTGGCTTTTT	15	True	NA	NA	False	AATAAA	-21	NA	7869199	7927518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.79	chr18	+	4856	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	181.947546623257	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	17	True	NA	NA	False	AATAAA	-17	NA	7869201	7929028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.80	chr18	+	3479	15	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	218.812005789333	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACATTTTGTTACTTTT	17	True	NA	NA	False	AATAAA	-12	NA	7869201	7927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7902964_7903236_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.81	chr18	+	4893	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-290	-1509	6	0	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	18	True	NA	NA	False	AATAAA	-17	NA	7869202	7929028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.84	chr18	+	3673	14	NNC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	153.119630687169	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	26	False	NA	NA	False	AATAAA	-25	NA	7869210	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916066_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.85	chr18	+	4473	12	NIC	ENSMUSG00000024283.16	novel	3094	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	106	junction_6	133.88887707707	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	27	False	NA	NA	False	AATAAA	-8	NA	7869211	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.86	chr18	+	2594	10	ISM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-280	6284	16	-255	5prime_fragment	FALSE	canonical	3	106	junction_6	140.438203096198	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACGCTGTTGAGTAATA	28	False	NA	NA	False	AATAAA	-13	NA	7869212	7921235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131
ES.16042.9	chr18	+	4064	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	-358	1502	-6	7	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTTTTTTTTTTTTA	-4	True	NA	NA	False	AATAAA	-29	NA	7868838	7927526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.93	chr18	+	6366	12	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_8	161.865417007897	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTTGGCTTTTTTTTT	21	False	NA	NA	False	AATAAA	-25	NA	7869241	7927522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917564_7917676_7918432_7921609_7921855_7921984_7926069
ES.16042.94	chr18	+	3184	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	187.806416290818	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTACCTTGGCTTT	23	False	NA	NA	False	AATAAA	-19	NA	7869243	7927516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869460_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.97	chr18	+	4741	13	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	12	0	intron_retention	FALSE	canonical	3	380	junction_6	72.1192588702907	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	32	False	NA	NA	False	AATAAA	-8	NA	7869252	7927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7920251_7921421_7921609_7921855_7921984_7926069
ES.16042.99	chr18	+	3482	14	NIC	ENSMUSG00000024283.16	novel	886	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	149.506288086872	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	326	False	NA	NA	False	AATAAA	-22	NA	7869687	7927519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ES.16043.1	chr18	-	5390	1	FSM	ENSMUSG00000117505.2	ENSMUST00000234126.2	1096	1	622	-4916	622	4916	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGGTCTCAGTGTCT	601	False	NA	NA	False	NA	NA	NA	7868491	7863101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_7863100_7868500
ES.16043.2	chr18	-	177	1	Intergenic	novelGene_13380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCTATT	2874	False	NA	NA	False	NA	NA	NA	7866218	7866041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_7866000_7866200
ES.16043.3	chr18	-	2560	1	FSM	ENSMUSG00000117505.2	ENSMUST00000234126.2	1096	1	-394	-1070	-394	1070	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCACTGGAAAATACTC	NA	False	NA	NA	False	AATAAA	-22	NA	7869507	7866947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_7866900_7869500
ES.16043.4	chr18	-	1489	1	FSM	ENSMUSG00000117505.2	ENSMUST00000234126.2	1096	1	-3	-390	-3	390	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTCTTGTGCTTGTCTT	-24	True	NA	NA	False	NA	NA	NA	7869116	7867627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_7867600_7869100
ES.16044.1	chr18	-	144	1	Antisense	novelGene_ENSMUSG00000024283.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-19	NA	7916168	7916024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_7916000_7916200
ES.16045.1	chr18	+	92	1	FSM	ENSMUSG00000117428.2	ENSMUST00000235002.2	790	1	783	-85	783	85	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACTACAAAAAAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	8051985	8052077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_8052000_8052100
ES.16046.1	chr18	+	105	1	Intergenic	novelGene_13382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	8075518	8075623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_8075500_8075600
ES.16047.1	chr18	-	5072	3	Intergenic	novelGene_13383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCTGTACCTTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	8618177	8611912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_8616786_8617608_8617696_8618065
ES.16048.1	chr18	+	2640	1	FSM	ENSMUSG00000092097.3	ENSMUST00000171469.3	439	1	422	-2623	422	2623	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCTGAGAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	8694520	8697160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_8694500_8697200
ES.16049.1	chr18	+	3708	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	0	2266	0	-2266	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTTCATGGTCTCT	0	True	NA	NA	False	AATGAA	-34	NA	9212162	9215870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9212200_9215900
ES.16049.2	chr18	+	3505	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	2	2467	2	-2467	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAGTACCACCCTGTCC	2	True	NA	NA	False	AATAAA	-18	NA	9212164	9215669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9212200_9215700
ES.16049.3	chr18	+	5977	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	2	-5	2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGAAGTCACTTGTGG	2	True	NA	NA	False	ATTAAA	-19	NA	9212164	9218141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9212200_9218100
ES.1605.1	chr1	+	4000	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAATGGGGAGAGACTG	5556	False	NA	NA	False	AATAAA	-14	NA	153081980	153085980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153082000_153086000
ES.16050.1	chr18	-	3147	1	Antisense	novelGene_ENSMUSG00000036904.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAATTAGCAACCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	9213709	9210562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_9210600_9213700
ES.16051.1	chr18	-	5924	12	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-41	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.5485339803605	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCATCTCATATGTAATA	-16	True	NA	5	True	AATAAA	-29	NA	9450011	9312298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377145_9377325_9377793_9377829_9386734_9386810_9449517
ES.16051.10	chr18	-	4109	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	8	1235	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	30.7336948641064	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAGGAGATAAAA	-13	True	NA	NA	False	AATGAA	-38	NA	9450142	9314065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377793_9377829_9386734_9386810_9449517
ES.16051.11	chr18	-	3692	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-18	2083	-14	914	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGTATTCGTTGTA	0	True	NA	-3	True	ATTAAA	-15	NA	9450168	9314386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.12	chr18	-	3725	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	9	907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.2923313289374	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTGTACAGTGTATT	-12	True	NA	-10	True	ATTAAA	-8	NA	9450141	9314393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9399211_9399279_9449517
ES.16051.13	chr18	-	2769	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-17	3005	-13	-8	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAATTCAAC	1	True	NA	NA	False	NA	NA	NA	9450167	9315308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.14	chr18	-	2966	12	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.5485339803605	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAATTCAAC	NA	False	NA	NA	False	NA	NA	NA	9450184	9315308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377266_9377325_9377793_9377829_9386734_9386810_9449517
ES.16051.15	chr18	-	2141	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-18	3634	-14	13	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTCTCTAGCCTTCT	0	True	NA	-6	True	AATAAA	-24	NA	9450168	9315937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.16	chr18	-	2053	10	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24.0867772752225	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTCCATTTTCTCT	-19	True	NA	-14	True	AATAAA	-16	NA	9450148	9315945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319512_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.17	chr18	-	1918	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-35	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.8437114779576	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCTCCATTTTCTC	-10	True	NA	-15	True	AATAAA	-15	NA	9450005	9315946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517_9449698_9449748
ES.16051.18	chr18	-	2051	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-50	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.2923313289374	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCTCCATTTTCTC	-25	True	NA	-15	True	AATAAA	-15	NA	9450020	9315946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9399211_9399279_9449517
ES.16051.19	chr18	-	2122	13	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.4562142241286	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCTGCTCCATTTTC	6	True	NA	-17	True	AATAAA	-13	NA	9450123	9315948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319471_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377793_9377829_9386734_9386810_9399211_9399279_9449517_9449698_9449748
ES.16051.20	chr18	-	2315	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.9194113786146	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTCTGCTCCATTTTC	-6	False	NA	-17	True	AATAAA	-13	NA	9450174	9315948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377145_9377325_9377793_9377829_9386734_9386810_9449517
ES.16051.21	chr18	-	9854	2	FSM	ENSMUSG00000024286.9	ENSMUST00000234382.2	1046	2	-20	-8788	-20	8788	multi-exon	FALSE	canonical	3	51	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCTTTTAATTTTGAA	-6	False	NA	NA	False	NA	NA	NA	9450174	9377612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9386810_9449517
ES.16051.3	chr18	-	5725	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	29	3	29	-3	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATGACTTCATCTCAT	8	True	NA	-3	True	AATAAA	-21	NA	9450121	9312306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.4	chr18	-	6020	13	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.5687333060648	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACCATGACTTCATCT	-4	True	NA	-6	True	AATAAA	-18	NA	9450172	9312309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377266_9377325_9377793_9377829_9386734_9386810_9399211_9399279_9449517
ES.16051.5	chr18	-	5863	13	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.5820045316759	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACCATGACTTCATCT	38	True	NA	-6	True	AATAAA	-18	NA	9449957	9312309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9339131_9339248_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9376063_9376186_9377793_9377829_9386734_9386810_9399211_9399279_9449517
ES.16051.6	chr18	-	5803	11	NNC	ENSMUSG00000024286.9	novel	5757	10	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.2923313289374	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTAACCATGACTT	-11	True	NA	-11	True	AATAAA	-13	NA	9450140	9312314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9399211_9399279_9449517
ES.16051.7	chr18	-	4244	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	2	1511	2	1486	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTACTTTTTCACT	-19	True	NA	NA	False	AATAAA	-17	NA	9450148	9313814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16051.8	chr18	-	4029	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-12	1740	-8	1257	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAATAGTAGTGTTGAT	6	False	NA	NA	False	AATAAA	-15	NA	9450162	9314043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ES.16052.1	chr18	+	178	1	Intergenic	novelGene_13384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	9473374	9473552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9473400_9473600
ES.16053.1	chr18	+	452	1	Intergenic	novelGene_13385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	9592392	9592844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592400_9592800
ES.16053.2	chr18	+	333	2	Intergenic	novelGene_13386	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	9592525	9597948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592655_9597744
ES.16053.3	chr18	+	5300	1	Intergenic	novelGene_13387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCGTTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	9592656	9597956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592700_9598000
ES.16053.4	chr18	+	5061	1	Intergenic	novelGene_13388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTCGGTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	9592756	9597817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592800_9597800
ES.16053.5	chr18	+	1405	1	Intergenic	novelGene_13389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAGTTGACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	9592762	9594167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592800_9594200
ES.16053.6	chr18	+	3142	2	Intergenic	novelGene_13390	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	0	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	9592763	9597950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9595058_9597102
ES.16053.7	chr18	+	1251	3	Intergenic	novelGene_13391	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	59	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAAGACCGTTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	9592764	9597946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592989_9594874_9595058_9597102
ES.16053.8	chr18	+	1070	2	Intergenic	novelGene_13392	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	9592764	9597948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9592989_9597102
ES.16053.9	chr18	+	5129	2	Intergenic	novelGene_13393	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	9592764	9597948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9597766_9597820
ES.16054.1	chr18	-	6198	2	Antisense	novelGene_ENSMUSG00000117349.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	9596791	9466332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_9468124_9592384
ES.16055.1	chr18	+	3389	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	-31	4666	-31	-21	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTCCAGCTGAAGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	9707563	9877978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ES.16055.2	chr18	+	2787	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	-29	5266	-29	25	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	9707565	9877378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ES.16055.3	chr18	+	2802	11	NNC	ENSMUSG00000036103.10	novel	3447	11	NA	NA	5	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.28009661779378	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCATTGGTTGTTGAG	11	False	NA	NA	False	NA	NA	NA	9707605	9877308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9707760_9720920_9720972_9725018_9725144_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ES.16055.4	chr18	+	3250	11	NNC	ENSMUSG00000036103.10	novel	3447	11	NA	NA	16	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6.66408283261845	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTCCAGCTGAAGAAA	-9	True	NA	NA	False	AATAAA	-27	NA	9707616	9877978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987_9877776_9877861
ES.16055.5	chr18	+	3279	10	NNC	ENSMUSG00000036103.10	novel	8024	10	NA	NA	18	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.02025288841392	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTCCAGCTGAAGAAA	-7	True	NA	NA	False	AATAAA	-27	NA	9707618	9877978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848158_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ES.16055.6	chr18	+	3445	11	NNC	ENSMUSG00000036103.10	novel	3447	11	NA	NA	-13	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.28009661779378	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTCCAGCTGAAGAAAAT	9	True	NA	NA	False	AATAAA	-29	NA	9707634	9877980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9707760_9720920_9720972_9725018_9725144_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ES.16055.7	chr18	+	4137	1	Intergenic	novelGene_13394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGAGAAGGGAGGATC	NA	False	NA	NA	False	NA	NA	NA	9740513	9744650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_9740500_9744600
ES.16056.1	chr18	+	2352	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	26	1756	26	8	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGCTGGTGCTCCAA	NA	False	NA	22	True	AATAAA	-22	NA	9957931	9993733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.10	chr18	+	1021	4	FSM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	-1	-129	-1	0	multi-exon	FALSE	canonical	3	775	junction_2	35.5621521658443	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAAACAG	9	True	NA	NA	False	NA	NA	NA	9958175	9961300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485
ES.16056.11	chr18	+	1920	19	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	288.404979323807	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	9	True	NA	14	True	AATAAA	-14	NA	9958175	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.12	chr18	+	2208	3	ISM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	-1	-146	-1	17	intron_retention	FALSE	canonical	3	775	junction_2	42.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTGGGGCACTGGAAG	9	True	NA	NA	False	ATTAAA	-10	NA	9958175	9961317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_9958247_9959097_9959172_9959254
ES.16056.13	chr18	+	3920	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_16	181.844778714448	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	9	True	NA	14	True	AATAAA	-14	NA	9958175	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.14	chr18	+	4056	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGAGCTTGTTTACACA	9	True	NA	NA	False	ATTAAA	-19	NA	9958175	9995484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.15	chr18	+	3005	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	270	859	-1	-859	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTTTCTTAATGCAT	9	True	NA	NA	False	AATAAA	-21	NA	9958175	9994630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.16	chr18	+	4118	19	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_15	186.787303941088	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACAGTTGGCTGGT	9	True	NA	15	True	AATAAA	-15	NA	9958175	9993726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.18	chr18	+	1983	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	9	True	NA	16	True	AATAAA	-16	NA	9958175	9993727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.19	chr18	+	2611	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_16	182.507405078773	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACAGTTGGCTGGT	10	True	NA	15	True	AATAAA	-15	NA	9958176	9993726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.2	chr18	+	1479	17	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	247	7756	-10	-422	5prime_fragment	FALSE	canonical	3	693	junction_8	53.725248661593	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGCTTAAAAGTTTAT	-14	True	NA	NA	False	AATAAA	-18	NA	9958152	9987733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598
ES.16056.20	chr18	+	9427	20	NNC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	243.581153608714	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTATTGTACAGTTGGC	10	True	NA	11	True	AATAAA	-11	NA	9958176	9993722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9972377_9972454_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.21	chr18	+	2059	19	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_15	242.972157120528	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	10	True	NA	10	True	AATAAA	-10	NA	9958176	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.22	chr18	+	3580	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_14	191.607911359374	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	10	True	NA	16	True	AATAAA	-16	NA	9958176	9993727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.23	chr18	+	2173	19	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_15	243.561821948989	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	10	True	NA	10	True	AATAAA	-10	NA	9958176	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.24	chr18	+	6651	15	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_11	208.953722539861	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	10	True	NA	10	True	AATAAA	-10	NA	9958176	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.25	chr18	+	3129	1	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAGCACTG	10	True	NA	NA	False	NA	NA	NA	9958176	9961305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958200_9961300
ES.16056.26	chr18	+	3364	1	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	240	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGTAAAAATGTATCA	10	True	NA	NA	False	NA	NA	NA	9958176	9961540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958200_9961500
ES.16056.28	chr18	+	5481	16	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_12	202.651688042974	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTATTGTACAGTTGGC	11	True	NA	11	True	AATAAA	-11	NA	9958177	9993722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.29	chr18	+	1747	15	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-1	-412	intron_retention	FALSE	canonical	3	693	junction_8	55.3216937188149	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTATTGTGGTTATT	12	True	NA	NA	False	AATAAA	-28	NA	9958178	9987743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598
ES.16056.3	chr18	+	6583	16	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_12	202.410737528093	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	-3	True	NA	16	True	AATAAA	-16	NA	9958163	9993727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.30	chr18	+	2296	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_16	182.47716815401	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTACAGTTGGCTGGTGC	13	True	NA	17	True	AATAAA	-17	NA	9958179	9993728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.31	chr18	+	2260	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_14	249.618269116699	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGTACAGTTGGCTG	13	True	NA	13	True	AATAAA	-13	NA	9958179	9993724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.32	chr18	+	1785	4	FSM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	3	-897	0	768	multi-exon	FALSE	canonical	3	775	junction_2	35.5621521658443	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAATAGTCTGCAGTG	13	True	NA	NA	False	AATAAA	-6	NA	9958179	9962068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485
ES.16056.33	chr18	+	5200	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_14	190.809693412955	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	13	True	NA	16	True	AATAAA	-16	NA	9958179	9993727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.35	chr18	+	2376	19	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_15	187.196511587736	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	13	True	NA	10	True	AATAAA	-10	NA	9958179	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.36	chr18	+	6054	17	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_13	195.983736570155	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	13	True	NA	14	True	AATAAA	-14	NA	9958179	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.37	chr18	+	6951	17	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	-867	intron_retention	FALSE	canonical	0	0	junction_13	195.983736570155	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATAATAGTTTTCT	13	True	NA	NA	False	AATAAA	-13	NA	9958179	9994622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.38	chr18	+	2239	21	NNC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.633275131529	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGCTGGTGCTCCAA	49	False	NA	22	True	AATAAA	-22	NA	9958238	9993733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9958441_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.39	chr18	+	2191	21	NIC	ENSMUSG00000024287.9	novel	1875	14	NA	NA	17	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	238.633275131529	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	66	False	NA	10	True	AATAAA	-10	NA	9958255	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958422_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.4	chr18	+	4899	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_14	190.794351145588	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACAGTTGGCTGGTG	0	True	NA	16	True	AATAAA	-16	NA	9958166	9993727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.40	chr18	+	4581	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	206	-4	intron_retention	FALSE	canonical	0	0	junction_14	189.728361641249	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	255	False	NA	10	True	AATAAA	-10	NA	9958444	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9959316_9960485_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.41	chr18	+	7138	15	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	219	0	intron_retention	FALSE	canonical	0	0	junction_11	206.576417643764	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	268	False	NA	14	True	AATAAA	-14	NA	9958457	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9959172_9959254_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.42	chr18	+	2213	21	NNC	ENSMUSG00000024287.9	novel	1875	14	NA	NA	240	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.633275131529	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	289	False	NA	10	True	AATAAA	-10	NA	9958478	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9958667_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.43	chr18	+	5950	9	NNC	ENSMUSG00000024287.9	novel	1039	4	NA	NA	79	-419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	252.257525903589	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTAAAAGTTTATTGT	NA	False	NA	NA	False	AATAAA	-21	NA	9970333	9987736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9972377_9972456_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598
ES.16056.44	chr18	+	3934	11	ISM	ENSMUSG00000024287.9	ENSMUST00000234901.2	1875	14	9460	4	3009	-4	3prime_fragment	FALSE	canonical	0	0	junction_7	234.772315233291	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	NA	False	NA	10	True	AATAAA	-10	NA	9973263	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.45	chr18	+	724	5	NNC	ENSMUSG00000024287.9	novel	1875	14	NA	NA	1310	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	401.486845986266	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTATTGTACAGTTGG	NA	False	NA	10	True	AATAAA	-10	NA	9987598	9993721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_9987665_9989690_9989775_9992127_9992276_9992831_9992857_9993320
ES.16056.46	chr18	+	4671	1	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-646	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTATTGTACAGTTGGC	NA	False	NA	11	True	AATAAA	-11	NA	9989051	9993722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9989100_9993700
ES.16056.5	chr18	+	2300	2	FSM	ENSMUSG00000024287.9	ENSMUST00000234805.2	2047	2	-13	-240	4	17	multi-exon	FALSE	canonical	3	860	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACTGGGGCACTGGAAG	0	True	NA	NA	False	ATTAAA	-10	NA	9958166	9961317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097
ES.16056.6	chr18	+	5292	18	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_14	191.65567091472	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	4	True	NA	14	True	AATAAA	-14	NA	9958170	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.7	chr18	+	3865	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	266	3	-5	-3	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCTTGTTTACACATT	5	True	NA	NA	False	ATTAAA	-21	NA	9958171	9995486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.8	chr18	+	4979	17	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_13	196.217513234675	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	5	True	NA	14	True	AATAAA	-14	NA	9958171	9993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16056.9	chr18	+	5377	17	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_13	197.142387866613	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGTACAGTTGGCTG	5	True	NA	13	True	AATAAA	-13	NA	9958171	9993724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_9958247_9959097_9959172_9959254_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ES.16057.1	chr18	+	7085	6	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGTAGCAAAAGAAACAGG	NA	False	NA	NA	False	NA	NA	NA	10002814	10016925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10005015_10005633_10005716_10007766_10007850_10009953_10010083_10012212_10015468_10015589
ES.16057.2	chr18	+	1830	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10010789	10016885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10012269_10016534
ES.16057.3	chr18	+	6136	1	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGTAGCAAAAGAAACAGG	NA	False	NA	NA	False	NA	NA	NA	10010789	10016925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10010800_10016900
ES.16057.4	chr18	+	5971	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10010792	10016885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10015440_10015561
ES.16057.5	chr18	+	6012	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAGCAAAAGAAACAGGT	NA	False	NA	NA	False	NA	NA	NA	10010792	10016926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10015468_10015589
ES.16057.6	chr18	+	5970	2	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10010792	10016885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10015450_10015572
ES.16058.1	chr18	-	4038	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	-38	-1981	-24	-547	multi-exon	FALSE	canonical	3	12	junction_12	235.664107213151	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTTTCAGTGTCATT	-24	True	NA	NA	False	AATAAA	-26	NA	10030105	9993612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ES.16058.10	chr18	-	4248	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	4	-578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	301.834805812716	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAAGAAAGG	4	True	NA	NA	False	NA	NA	NA	10030077	9993643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10008101_10008266_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.12	chr18	-	4139	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	164	-578	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_15	224.112372607037	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAAGAAAGG	223	False	NA	NA	False	NA	NA	NA	10029858	9993643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029638
ES.16058.14	chr18	-	4182	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-3	-578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	301.790121348844	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAAGAAAGG	11	True	NA	NA	False	NA	NA	NA	10030070	9993643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10018320_10018426_10022817_10022851_10024533_10024680_10029912
ES.16058.15	chr18	-	2512	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	42	2172	-18	356	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTGATCAGTTTCAT	-18	True	NA	NA	False	AGTAAA	-25	NA	10030099	9995237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.16	chr18	-	5262	14	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	3	161	intron_retention	FALSE	canonical	3	792	junction_3	64.7271926430895	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTTGACATTTCTTTT	3	True	NA	-1	True	AATAAA	-23	NA	10030078	9995432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.17	chr18	-	2354	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	4	2368	4	160	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTTGACATTTCTTT	-56	True	NA	-2	True	AATAAA	-22	NA	10030137	9995433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.19	chr18	-	2387	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	125	159	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_15	224.112372607037	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTTTGACATTTCTT	184	False	NA	-3	True	AATAAA	-21	NA	10029897	9995434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029638
ES.16058.2	chr18	-	4226	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	-47	547	-47	-547	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTTTCAGTGTCATT	NA	False	NA	NA	False	AATAAA	-26	NA	10030188	9993612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.20	chr18	-	2206	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	-28	-159	-14	159	multi-exon	FALSE	canonical	3	12	junction_12	235.664107213151	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTTTGACATTTCTT	-14	True	NA	-3	True	AATAAA	-21	NA	10030095	9995434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ES.16058.21	chr18	-	3240	15	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-24	154	intron_retention	FALSE	canonical	3	792	junction_2	52.1804658891444	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAACAACTTTTGACAT	-24	True	NA	-8	True	AATAAA	-16	NA	10030105	9995439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.23	chr18	-	7302	11	NNC	ENSMUSG00000047879.18	novel	2019	15	NA	NA	1099	154	intron_retention	TRUE	non_canonical	0	0	junction_4	360.572447644021	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAACAACTTTTGACAT	1058	False	NA	-8	True	AATAAA	-16	NA	10015826	9995439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001766_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10015440_10015561
ES.16058.24	chr18	-	5649	14	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	12	151	intron_retention	FALSE	canonical	3	792	junction_2	53.7566288742979	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGATTAACAACTTTTGA	26	True	NA	-11	True	AATAAA	-13	NA	10030055	9995442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.26	chr18	-	2414	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	4	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	301.834805812716	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAAATAAGGAAAA	18	True	NA	-32	True	NA	NA	NA	10030063	9995463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10008101_10008266_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.27	chr18	-	2299	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-24	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.867276661907	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAAATAAGGAAAA	-24	True	NA	-32	True	NA	NA	NA	10030105	9995463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997165_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.28	chr18	-	2197	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	11	2518	11	10	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATACACTTATTATTGTG	-49	True	NA	-55	True	AATAAA	-25	NA	10030130	9995583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.29	chr18	-	4238	15	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	0	6	intron_retention	FALSE	canonical	0	0	junction_4	239.200891149115	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATACACTTATTAT	14	True	NA	-59	True	AATAAA	-21	NA	10030067	9995587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001766_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.3	chr18	-	4127	15	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-17	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	238.03764065237	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTGTTTCAGTGTC	-17	True	NA	NA	False	AATAAA	-23	NA	10030098	9993615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10024506_10024680_10029912
ES.16058.30	chr18	-	2062	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	-38	-5	-24	5	multi-exon	FALSE	canonical	3	12	junction_12	235.664107213151	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTATACACTTATTA	-24	True	NA	-60	True	AATAAA	-20	NA	10030105	9995588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ES.16058.31	chr18	-	3098	15	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	29	5	intron_retention	FALSE	canonical	3	792	junction_2	52.1804658891444	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTATACACTTATTA	-31	True	NA	-60	True	AATAAA	-20	NA	10030112	9995588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.33	chr18	-	1824	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	213.072015041277	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTATACACTTATTA	-22	True	NA	-60	True	AATAAA	-20	NA	10030103	9995588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9995730_9996070_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.34	chr18	-	6083	9	NNC	ENSMUSG00000047879.18	novel	2019	15	NA	NA	3607	4	intron_retention	FALSE	non_canonical	0	0	junction_8	301.203004633088	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGATTATACACTTATT	3566	False	NA	-61	True	AATAAA	-19	NA	10013318	9995589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10002434_10004895_10005011_10005629_10005716_10007766_10010230_10011516
ES.16058.37	chr18	-	6440	14	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-6	2	intron_retention	FALSE	canonical	3	792	junction_3	61.086513488474	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTTGATTATACACTTA	NA	False	NA	-63	True	AATAAA	-17	NA	10030147	9995591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.38	chr18	-	4614	8	NIC	ENSMUSG00000047879.18	novel	2019	15	NA	NA	-2042	1	intron_retention	FALSE	canonical	3	792	junction_3	68.6582783331586	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTTGATTATACACTT	6434	False	NA	-64	True	AATAAA	-16	NA	10010450	9995592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005716_10007766
ES.16058.39	chr18	-	7119	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	306.433128467244	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	3	True	NA	-65	True	AATAAA	-15	NA	10030078	9995593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010230_10011522_10015440_10015561_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.4	chr18	-	3792	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-23	-552	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_1	212.374337844759	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTGTTTGTTTCAGTG	-23	True	NA	NA	False	AATAAA	-21	NA	10030104	9993617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9995726_9996070_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.40	chr18	-	1916	18	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	380.872509525314	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAACACACTTGATTA	-13	True	NA	-71	True	AATAAA	-9	NA	10030094	9995599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9995730_9996070_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10008101_10008213_10009951_10010080_10012208_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.41	chr18	-	5120	14	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-22	-6	intron_retention	FALSE	canonical	3	792	junction_3	64.7271926430895	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAACACACTTGATTA	-22	True	NA	-71	True	AATAAA	-9	NA	10030103	9995599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.42	chr18	-	6700	6	NIC	ENSMUSG00000047879.18	novel	2019	15	NA	NA	-641	-6	intron_retention	FALSE	canonical	3	792	junction_3	76.955571598163	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAACACACTTGATTA	7835	False	NA	-71	True	AATAAA	-9	NA	10009049	9995599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10005011_10005629_10005716_10007766
ES.16058.44	chr18	-	2158	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	231.113017086158	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAACACACTTGATTA	-39	True	NA	-71	True	AATAAA	-9	NA	10030120	9995599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009964_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.45	chr18	-	3258	14	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	792	junction_3	65.1288209137051	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAACACACTTGATTA	-3	True	NA	-71	True	AATAAA	-9	NA	10030084	9995599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10002434_10004895_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.46	chr18	-	1968	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	60	2698	0	-170	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTCTGCCTTATCTAAC	0	True	NA	NA	False	NA	NA	NA	10030081	9995763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.47	chr18	-	1699	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	90	2937	16	-409	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGCCACTTGTGCATC	30	True	NA	NA	False	AAGAAA	-11	NA	10030051	9996002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.48	chr18	-	3438	6	NIC	ENSMUSG00000047879.18	novel	1346	7	NA	NA	-1	20	intron_retention	FALSE	canonical	3	830	junction_3	52.25552602357	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGATAGATAAATTAAAAATA	58	True	NA	NA	False	NA	NA	NA	10030023	10009332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.49	chr18	-	1922	1	Intergenic	novelGene_13395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCGTCACTATAGTTTT	1554	False	NA	NA	False	NA	NA	NA	10015330	10013408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10013400_10015300
ES.16058.5	chr18	-	4135	15	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	24	-552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	238.03764065237	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTGTTTGTTTCAGTG	-36	True	NA	NA	False	AATAAA	-21	NA	10030117	9993617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10024515_10024680_10029912
ES.16058.50	chr18	-	175	1	Intergenic	novelGene_13396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGGTAATTCTCT	3490	False	NA	NA	False	NA	NA	NA	10026591	10026416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10026400_10026600
ES.16058.6	chr18	-	5162	9	ISM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	20499	552	-1234	-552	3prime_fragment	FALSE	canonical	3	792	junction_3	64.6189552298704	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTGTTTGTTTCAGTG	7242	False	NA	NA	False	AATAAA	-21	NA	10009642	9993617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766
ES.16058.7	chr18	-	3951	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	0	-552	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.79244534557	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTGTTTGTTTCAGTG	0	True	NA	NA	False	AATAAA	-21	NA	10030081	9993617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9995375_9995537_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.8	chr18	-	6237	15	NIC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	4	-555	intron_retention	FALSE	canonical	3	792	junction_3	61.9710268049942	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTAACTGTTTGTTTCA	4	True	NA	NA	False	AATAAA	-18	NA	10030077	9993620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16058.9	chr18	-	4159	16	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	5	-576	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	230.832984355934	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAGAAAGGAA	-55	True	NA	NA	False	NA	NA	NA	10030136	9993641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_9996249_9997172_9997281_9997716_9997789_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ES.16059.1	chr18	+	159	1	Intergenic	novelGene_13397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	10037751	10037910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_10037800_10037900
ES.1606.1	chr1	-	7826	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	20	-224	20	224	multi-exon	TRUE	canonical	3	518	junction_2	111.881330429904	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTCGTCGTCATCATCA	NA	False	NA	NA	False	NA	NA	NA	153208512	153094443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.12	chr1	-	7575	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	232	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	192.018774802214	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208300	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207688
ES.1606.13	chr1	-	7164	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	347	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208185	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153094946_153095056_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.14	chr1	-	6394	7	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-4065	-1	intron_retention	FALSE	canonical	3	518	junction_2	173.471099097868	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	153109229	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153097476_153099404_153099505_153102129_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479
ES.1606.16	chr1	-	7606	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	192.040490700756	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	153208526	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122991_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.18	chr1	-	8542	27	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	47	-1	intron_retention	FALSE	canonical	3	518	junction_2	108.5729174443	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	153208485	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153097476_153099404_153099505_153102129_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.2	chr1	-	7945	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-251	-72	-251	72	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTCGGACTGGCTTG	NA	False	NA	71	True	AATGAA	-15	NA	153208783	153094595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.20	chr1	-	5517	24	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-673	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.864005250663	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	3207	False	NA	-2	True	AATAAA	-23	NA	153126880	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096339_153096931_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822
ES.1606.24	chr1	-	7538	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	191.632220916208	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	153208509	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117682_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.29	chr1	-	7537	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	153208501	153094668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153094727_153094779_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.31	chr1	-	7426	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	191.718357674507	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208508	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103287_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.33	chr1	-	6356	24	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.435921346054	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208492	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096895_153104856_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.37	chr1	-	9185	27	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	48	-2	intron_retention	FALSE	canonical	3	518	junction_2	112.41691211814	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208484	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.38	chr1	-	6892	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208526	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153095033_153095754_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.39	chr1	-	7480	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208528	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096343_153096478_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.40	chr1	-	7495	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTTGTGTGGCCTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	153208520	153094669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096571_153096683_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.41	chr1	-	3166	4	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	1912	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	436.486731375269	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATCTTGTGTGGCCTAA	NA	False	NA	-4	True	AATAAA	-21	NA	153102978	153094670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153102876
ES.1606.42	chr1	-	7076	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-35898	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.14830721705	1237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATCTTGTGTGGCCTA	NA	False	NA	-5	True	AATAAA	-20	NA	153162105	153094671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097471_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153161983
ES.1606.43	chr1	-	7529	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATCTTGTGTGGCCTA	NA	False	NA	-5	True	AATAAA	-20	NA	153208491	153094671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153095007_153095054_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.44	chr1	-	7434	27	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	25	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	183.718546798819	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATCTTGTGTGGCCTA	NA	False	NA	-5	True	AATAAA	-20	NA	153208507	153094671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153097476_153099404_153099505_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.47	chr1	-	7543	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	191.718357674507	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTATATCTTGTGTGGC	NA	False	NA	-8	True	AATAAA	-17	NA	153208499	153094674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103437_153104499_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.48	chr1	-	7510	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	44	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	239.645132520601	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTATATCTTGTGTG	NA	False	NA	-10	True	AATAAA	-15	NA	153208488	153094676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133817_153133953_153138135_153138261_153138323_153138441_153207873
ES.1606.5	chr1	-	7423	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208490	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153095011_153095167_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.51	chr1	-	7237	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	233	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	192.062775517196	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTTTATATCTTGTGT	NA	False	NA	-11	True	AATAAA	-14	NA	153208299	153094677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119212_153122814_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.52	chr1	-	8500	27	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	17	-10	intron_retention	FALSE	canonical	3	518	junction_2	108.522977688555	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTTTATATCTTGTGT	NA	False	NA	-11	True	AATAAA	-14	NA	153208515	153094677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.53	chr1	-	6686	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	23	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTTTATATCTTGTG	NA	False	NA	-12	True	AATAAA	-13	NA	153208509	153094678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153094930_153095831_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.55	chr1	-	3934	10	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	4810	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	319.066152821861	1219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTTTATATCTTGTG	NA	False	NA	-12	True	AATAAA	-13	NA	153110262	153094678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103438_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193
ES.1606.56	chr1	-	7555	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	23	44	23	-44	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTATTTTATTTATAATAA	NA	False	NA	-45	True	AATAAA	-39	NA	153208509	153094711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.59	chr1	-	7507	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	43	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	190.066770449442	1240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATGTTTAAAAAGAAAAC	NA	False	NA	-64	True	AATAAA	-20	NA	153208489	153094730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115149_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.6	chr1	-	7094	28	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	11122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	244.002631032162	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153197410	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125709_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153197274
ES.1606.60	chr1	-	7446	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-148	324	-148	-324	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTCGACACAGCCATT	NA	False	NA	NA	False	AATGAA	-29	NA	153208680	153094991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.61	chr1	-	6778	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-225	1069	-225	-1069	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCCGGTCCTCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	153208757	153095736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.63	chr1	-	5553	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-5	2074	-5	-2074	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCATTTAGAATGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	153208537	153096741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.64	chr1	-	5552	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-250	2320	-250	-2320	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCCCTTGTTTGCCTG	NA	False	NA	2	True	AATAAA	-34	NA	153208782	153096987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.65	chr1	-	5205	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	28	-2330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTACCGGAACTTTCCCT	NA	False	NA	-8	True	AATAAA	-24	NA	153208504	153096997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153097267_153097325_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.69	chr1	-	5137	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	22	2463	22	-2463	multi-exon	FALSE	canonical	3	518	junction_2	111.881330429904	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTCTGCTGCTCTCCA	NA	False	NA	NA	False	NA	NA	NA	153208510	153097130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.7	chr1	-	7390	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208727	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096426_153096852_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.70	chr1	-	2642	11	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	20	29687	20	8	5prime_fragment	FALSE	canonical	3	696	junction_9	48.7156032498829	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTTACTAATGAGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	153208512	153124354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.1606.71	chr1	-	1469	2	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	23	-12782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGTAGAAAAGGTATA	NA	False	NA	NA	False	NA	NA	NA	153208509	153137144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153138441_153208336
ES.1606.72	chr1	-	2157	2	ISM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	-202	42477	-202	-12782	5prime_fragment	FALSE	canonical	3	756	junction_1	0	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGTAGAAAAGGTATA	NA	False	NA	NA	False	NA	NA	NA	153208734	153137144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_153138441_153207873
ES.1606.73	chr1	-	1351	1	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-12290	-12784	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGTAGAAAAGGTA	2503	False	NA	NA	False	NA	NA	NA	153138497	153137146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153137100_153138500
ES.1606.74	chr1	-	194	1	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGAGATCTGGATTGCT	NA	False	NA	NA	False	NA	NA	NA	153203022	153202828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153202800_153203000
ES.1606.8	chr1	-	7348	29	NNC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.726600117304	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208491	153094667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153096498_153096730_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ES.16060.1	chr18	+	1599	3	Antisense	novelGene_ENSMUSG00000047879.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTGCTTTCCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	10039383	10045802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10039406_10039513_10039644_10044355
ES.16061.1	chr18	+	6202	15	Antisense	novelGene_ENSMUSG00000024290.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATATGATTACTGA	NA	False	NA	NA	False	AAAAAG	-5	NA	10067547	10102424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10070477_10070617_10070701_10072831_10072921_10073114_10073190_10079117_10079275_10080350_10080542_10083123_10083211_10084317_10084412_10090812_10090979_10092128_10092226_10093909_10093977_10095246_10095591_10097474_10097644_10099256_10099407_10100920
ES.16061.2	chr18	+	6198	15	Antisense	novelGene_ENSMUSG00000024290.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATATGATTACTGA	NA	False	NA	NA	False	AAAAAG	-5	NA	10067549	10102424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10070477_10070617_10070701_10072831_10072921_10073114_10073190_10079117_10079275_10080350_10080537_10083119_10083211_10084317_10084412_10090812_10090979_10092128_10092226_10093909_10093977_10095246_10095596_10097480_10097644_10099256_10099407_10100920
ES.16061.3	chr18	+	178	1	Intergenic	novelGene_13398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAAAAGGGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	10090386	10090564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_10090400_10090600
ES.16062.1	chr18	+	8280	3	Antisense	novelGene_ENSMUSG00000024290.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10117122	10125604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10123459_10123620_10125321_10125360
ES.16063.1	chr18	-	7028	33	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	73	667	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	43.5806992113481	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGTAGGGTGTGGATC	231	False	NA	NA	False	NA	NA	NA	10181972	10063733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099402_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.10	chr18	-	5646	11	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-3978	-10	intron_retention	FALSE	canonical	3	195	junction_9	16.5275527529033	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	8764	False	NA	NA	False	ATTAAA	-11	NA	10092186	10064410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128
ES.16063.11	chr18	-	6164	30	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-103	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	45.2385144172808	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	-9	True	NA	NA	False	ATTAAA	-11	NA	10182148	10064410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.12	chr18	-	2938	10	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-2770	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.2109695625518	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	9972	False	NA	NA	False	ATTAAA	-11	NA	10090978	10064410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080544_10084342_10084412_10090812
ES.16063.15	chr18	-	6516	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-203	127	-203	-127	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGACTACTATAGTATTT	NA	False	NA	0	True	AATAAA	-26	NA	10182248	10064527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.16	chr18	-	8879	32	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-28	-129	intron_retention	FALSE	canonical	3	139	junction_21	28.8708776354694	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGACTACTATAGTAT	7	True	NA	-2	True	AATAAA	-24	NA	10182073	10064529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.2	chr18	-	7248	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-144	-664	-144	664	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGATGTAGGGTGTGG	14	True	NA	NA	False	NA	NA	NA	10182189	10063736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.22	chr18	-	6287	33	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-41	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.4259427070962	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACTCTGTGCTCATTT	-6	True	NA	-1	True	AATAAA	-21	NA	10182086	10064585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067479_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.23	chr18	-	5934	34	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	236	-185	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_29	52.964530640503	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACTCTGTGCTCATTT	647	False	NA	-1	True	AATAAA	-21	NA	10181556	10064585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10137738_10137907_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.24	chr18	-	6351	33	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-121	-188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	50.8079929581705	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGACTCTGTGCTCA	4	True	NA	-4	True	AATAAA	-18	NA	10182166	10064588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116860_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136253_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.28	chr18	-	8211	32	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-149	-190	intron_retention	FALSE	canonical	3	139	junction_21	28.4175057067494	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAATGACTCTGTGCT	9	True	NA	-6	True	AATAAA	-16	NA	10182194	10064590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.29	chr18	-	5295	26	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	13	-193	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	42.9014871537106	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGCTAATGACTCTGT	171	False	NA	-9	True	AATAAA	-13	NA	10182032	10064593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10067679_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.3	chr18	-	6697	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-238	-19	-238	19	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTACTATTGTTCAA	NA	False	NA	NA	False	ATTAAA	-40	NA	10182283	10064381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.31	chr18	-	5983	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-162	619	-162	-619	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTTTTTTTCATTGG	-4	True	NA	NA	False	CATAAA	-35	NA	10182207	10065019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.34	chr18	-	5700	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	1	739	1	539	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATTATTCTTAGAATA	-1	True	NA	NA	False	TATAAA	-21	NA	10182044	10065139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.35	chr18	-	5686	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-170	924	-170	354	multi-exon	FALSE	canonical	3	139	junction_22	28.5588755906111	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTGCCAAGCCATATT	-12	True	NA	NA	False	NA	NA	NA	10182215	10065324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.36	chr18	-	8727	31	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-160	-600	intron_retention	FALSE	canonical	3	139	junction_21	29.2567371158622	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATAAAAAAAAAAGAAATAC	-2	True	NA	NA	False	NA	NA	NA	10182205	10066355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.37	chr18	-	3376	1	FSM	ENSMUSG00000024290.10	ENSMUST00000234463.2	3494	1	2370	-2252	-1863	-642	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAAAAGGAAAAAGAA	NA	False	NA	NA	False	TATAAA	-43	NA	10069773	10066397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10066400_10069800
ES.16063.38	chr18	-	5724	31	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-37	4712	-37	-463	5prime_fragment	FALSE	canonical	3	139	junction_20	29.2088456921301	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTTGAAAAATTATGA	-2	True	NA	NA	False	NA	NA	NA	10182082	10069112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.39	chr18	-	3265	1	FSM	ENSMUSG00000024290.10	ENSMUST00000234463.2	3494	1	-271	500	-271	-500	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10072414	10069149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10069100_10072400
ES.16063.4	chr18	-	6466	33	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_31	50.9745264200659	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGGGCTCTAAAAC	-2	True	NA	NA	False	ATTAAA	-21	NA	10182082	10064400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116860_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150242_10150317_10181224
ES.16063.40	chr18	-	3985	26	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-162	16047	-162	3921	5prime_fragment	FALSE	canonical	3	139	junction_15	24.8149632278591	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAATAGAAAGCTACAAC	-4	True	NA	NA	False	AATACA	-24	NA	10182207	10080447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.41	chr18	-	5993	25	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-42	3906	intron_retention	FALSE	canonical	3	139	junction_15	25.2750151115462	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGGAAA	-7	True	NA	NA	False	AATACA	-9	NA	10182087	10080462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.42	chr18	-	3030	18	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-159	34856	-159	-2320	5prime_fragment	FALSE	canonical	3	139	junction_7	21.5075427342053	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCACTTAATGTGC	-1	True	NA	NA	False	NA	NA	NA	10182204	10099256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.43	chr18	-	2875	17	ISM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	-160	36526	-160	-3990	5prime_fragment	FALSE	canonical	3	139	junction_6	21.8352317081821	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAATGATTTACTG	-2	True	NA	2	True	AAGAAA	-30	NA	10182205	10100926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.44	chr18	-	5488	12	NIC	ENSMUSG00000024290.10	novel	1989	14	NA	NA	-10	-2020	intron_retention	FALSE	canonical	3	26	junction_2	43.3883101139633	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGACAACTTTTTTCT	148	False	NA	NA	False	TATAAA	-15	NA	10182055	10111663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10112393_10116773_10116860_10119884_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.5	chr18	-	5578	27	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.5352099188453	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGGGCTCTAAAAC	-2	True	NA	NA	False	ATTAAA	-21	NA	10182082	10064400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070252_10084310_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.6	chr18	-	6408	34	NNC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.9177786103243	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGGGCTCTAAAAC	149	False	NA	NA	False	ATTAAA	-21	NA	10182054	10064400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10066052_10067470_10067679_10070218_10070252_10070292_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16063.9	chr18	-	6342	31	NIC	ENSMUSG00000024290.10	novel	6440	33	NA	NA	-167	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	43.6239613056861	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	-9	True	NA	NA	False	ATTAAA	-11	NA	10182212	10064410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ES.16064.1	chr18	-	190	1	Intergenic	novelGene_13399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGATGAAATGAC	NA	False	NA	NA	False	NA	NA	NA	10190631	10190441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10190400_10190600
ES.16065.1	chr18	-	133	1	Intergenic	novelGene_13400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	10228500	10228367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10228400_10228500
ES.16066.1	chr18	-	147	1	Antisense	novelGene_ENSMUSG00000117492.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	10236590	10236443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_10236400_10236600
ES.16067.1	chr18	-	4686	1	Intergenic	novelGene_13401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTCGTGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	10276032	10271346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10271300_10276000
ES.16067.2	chr18	-	3628	2	Intergenic	novelGene_13402	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTTTCTCGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	10275976	10271348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10274715_10275714
ES.16067.3	chr18	-	2871	2	Intergenic	novelGene_13403	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTTTCAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	10276095	10272210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10274701_10275714
ES.16067.4	chr18	-	2552	2	Intergenic	novelGene_13404	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTAATAAATTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	10275768	10272216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10274715_10275714
ES.16067.5	chr18	-	3813	1	Intergenic	novelGene_13405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGCTCTTATTTCTA	NA	False	NA	NA	False	NA	NA	NA	10276075	10272262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10272300_10276100
ES.16067.6	chr18	-	1995	2	Intergenic	novelGene_13406	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGACTAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	10276031	10273022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10274701_10275714
ES.16067.7	chr18	-	2095	1	Intergenic	novelGene_13407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAACCAGACTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	10276038	10273943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10273900_10276000
ES.16067.8	chr18	-	1873	1	Intergenic	novelGene_13408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTCTCTTTAATGAAG	NA	False	NA	NA	False	NA	NA	NA	10276038	10274165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10274200_10276000
ES.16067.9	chr18	-	755	1	Intergenic	novelGene_13409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTGGTGGTTCATCA	NA	False	NA	NA	False	NA	NA	NA	10276039	10275284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10275300_10276000
ES.16068.1	chr18	-	223	1	Intergenic	novelGene_13410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTAATTAAGAATATCG	NA	False	NA	NA	False	NA	NA	NA	10286573	10286350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10286400_10286600
ES.16069.1	chr18	-	176	1	Intergenic	novelGene_13411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	10321099	10320923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10320900_10321100
ES.1607.1	chr1	-	160	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	153214186	153214026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153214000_153214200
ES.16070.1	chr18	+	3950	20	NIC	ENSMUSG00000042942.19	novel	8420	33	NA	NA	-34	-4618	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.34802615524902	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCATATGGTGAATAA	209	False	NA	NA	False	AATAAA	-26	NA	10325142	10533671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_10325290_10449929_10450037_10458221_10458382_10458577_10458776_10469341_10469519_10474218_10474396_10476665_10476789_10495096_10495226_10498950_10499068_10499883_10500004_10500940_10501079_10503157_10503344_10509082_10509410_10510627_10510757_10511328_10511464_10515193_10515392_10522087_10522269_10523206_10523400_10529575_10529707_10532794
ES.16070.2	chr18	+	8447	33	FSM	ENSMUSG00000042942.19	ENSMUST00000048977.16	8420	33	-25	-2	-23	2	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGTTTTCTTTAAAC	-32	True	NA	NA	False	ATTAAA	-26	NA	10325153	10562942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10325290_10449929_10450037_10458221_10458382_10458577_10458776_10469341_10469519_10474218_10474396_10476665_10476789_10498950_10499068_10499883_10500004_10500940_10501079_10503157_10503344_10509082_10509410_10510627_10510757_10511328_10511464_10515193_10515392_10522087_10522269_10523206_10523400_10529575_10529707_10532794_10533135_10537063_10537180_10538131_10538377_10541642_10542191_10542342_10542446_10544446_10544603_10544868_10545009_10547009_10547172_10547280_10547486_10553702_10553869_10554823_10555052_10555885_10556028_10557239_10557441_10558785_10558925_10560319
ES.16070.3	chr18	+	3798	19	ISM	ENSMUSG00000042942.19	ENSMUST00000048977.16	8420	33	-24	29280	-22	-4629	5prime_fragment	FALSE	canonical	0	0	junction_1	1.42400062421959	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTTGTAGAAAATTCAT	-31	True	NA	NA	False	AATAAA	-15	NA	10325154	10533660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10325290_10449929_10450037_10458221_10458382_10458577_10458776_10469341_10469519_10474218_10474396_10476665_10476789_10498950_10499068_10499883_10500004_10500940_10501079_10503157_10503344_10509082_10509410_10510627_10510757_10511328_10511464_10515193_10515392_10522087_10522269_10523206_10523400_10529575_10529707_10532794
ES.16070.4	chr18	+	2300	10	NNC	ENSMUSG00000042942.19	novel	8420	33	NA	NA	-21255	129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	0.831479419283098	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTGTTGAACACCCTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	10532530	10547703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10532598_10532794_10533135_10537063_10537180_10538131_10538377_10541642_10542191_10542342_10542446_10544446_10544603_10544868_10545009_10547009_10547172_10547280
ES.16070.5	chr18	+	5528	16	NNC	ENSMUSG00000042942.19	novel	567	5	NA	NA	-21212	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	1.16619037896906	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTTGAAAAGCTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	10532573	10562932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10532598_10532794_10533135_10537063_10537180_10538131_10538377_10541642_10542191_10542342_10542446_10544446_10544603_10544868_10545009_10547009_10547172_10547280_10547486_10553702_10553869_10554823_10555052_10555885_10556028_10557239_10557441_10558785_10558925_10560319
ES.16070.6	chr18	+	4975	12	ISM	ENSMUSG00000042942.19	ENSMUST00000048977.16	8420	33	216292	8	-12315	-8	3prime_fragment	FALSE	canonical	1	1	junction_2	1.31110955471418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTTGAAAAGCTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	10541470	10562932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10542191_10542342_10542446_10544446_10544603_10544868_10545009_10547009_10547172_10547280_10547486_10553702_10553869_10554823_10555052_10555885_10556028_10557239_10557441_10558785_10558925_10560319
ES.16071.1	chr18	-	2084	1	Intergenic	novelGene_13412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10348234	10346150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10346200_10348200
ES.16072.1	chr18	-	172	1	Intergenic	novelGene_13413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTGTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	10551213	10551041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10551000_10551200
ES.16073.1	chr18	-	4384	1	Antisense	novelGene_ENSMUSG00000042942.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTAGCAACTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	10561155	10556771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_10556800_10561200
ES.16074.1	chr18	-	877	1	Intergenic	novelGene_13414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAAAGCTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	10564222	10563345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10563300_10564200
ES.16075.1	chr18	+	209	1	Intergenic	novelGene_13415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAACAGAAAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	10574474	10574683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_10574500_10574700
ES.16076.1	chr18	+	1174	1	Antisense	novelGene_ENSMUSG00000024293.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGTTGATGATTTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	10609689	10610863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_10609700_10610900
ES.16077.1	chr18	-	4169	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	44.4191594742073	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	-26	True	NA	-6	True	ATTAAA	-21	NA	10610108	10566506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.10	chr18	-	4868	11	NIC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	4	-4	intron_retention	FALSE	canonical	1	1	junction_4	42.5985915260117	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTGATACAATGTTAT	-23	True	NA	-24	True	AATAAA	-38	NA	10610105	10566605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.11	chr18	-	4564	12	FSM	ENSMUSG00000024293.17	ENSMUST00000127099.9	4572	12	1	7	1	2	multi-exon	FALSE	canonical	1	1	junction_5	52.6252932305684	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACTTGATACAATGT	3	True	NA	-27	True	AATAAA	-35	NA	10610351	10566608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10577637_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.12	chr18	-	4507	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	-65	103	-65	1	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTACTTGATACAATG	NA	False	NA	-28	True	AATAAA	-34	NA	10610417	10566609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.14	chr18	-	4101	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	43.4275329403358	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTACTTGATACAA	9	True	NA	-30	True	AATAAA	-32	NA	10610125	10566611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10593745_10595876_10596338_10596442_10610025
ES.16077.15	chr18	-	4172	11	NNC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.7912374207617	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATGTACTTGATACA	1	True	NA	-31	True	AATAAA	-31	NA	10610133	10566612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10567647_10571954_10572143_10574874_10574971_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.16	chr18	-	4450	11	NIC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	61.9862081434249	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATGTACTTGATACA	1	True	NA	-31	True	AATAAA	-31	NA	10610353	10566612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10577637_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10593745_10595876_10596338_10596442_10610025
ES.16077.17	chr18	-	4288	11	NNC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	410	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.523052571517	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATGTACTTGATACA	701	False	NA	-31	True	AATAAA	-31	NA	10609653	10566612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10609477
ES.16077.19	chr18	-	2515	11	FSM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	-255	-11	-12	0	multi-exon	FALSE	canonical	0	0	junction_8	42.8836798794133	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTGATAAATGTACTT	NA	False	NA	-37	True	AATAAA	-25	NA	10610364	10566618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10595675_10595876_10596338_10596442_10610025
ES.16077.21	chr18	-	6280	12	NNC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_3	62.6570093959669	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTTTCTAAGTGATAAA	3	True	NA	-44	True	AATAAA	-18	NA	10610131	10566625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10567647_10571954_10572143_10574874_10577091_10577695_10577760_10581176_10581206_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.22	chr18	-	4092	1	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	39345	3	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTTTCTAAGTGATAA	NA	False	NA	-45	True	AATAAA	-17	NA	10570718	10566626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10566600_10570700
ES.16077.23	chr18	-	2073	10	FSM	ENSMUSG00000024293.17	ENSMUST00000097670.10	2088	10	-2	17	1	2	multi-exon	FALSE	canonical	0	0	junction_8	44.9611629391357	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTTTTCTAAGTGATA	3	True	NA	-46	True	AATAAA	-16	NA	10610131	10566627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10596338_10596442_10610025
ES.16077.24	chr18	-	4272	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.0954236391324	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGCTTTTTCTAAGTGA	NA	False	NA	-48	True	AATAAA	-14	NA	10610390	10566629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.25	chr18	-	4686	10	NIC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	-3	-19	intron_retention	FALSE	canonical	1	1	junction_4	57.1575686529876	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAATAAAATACTT	4	True	NA	-67	True	NA	NA	NA	10610078	10566648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10593745_10595876_10596338_10596442_10610025
ES.16077.26	chr18	-	3945	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	-21	621	-21	-498	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTTTTATATTGATC	NA	False	NA	NA	False	AATATA	-18	NA	10610373	10567127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.27	chr18	-	177	1	Intergenic	novelGene_13416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGAGGTGGTTAATGAG	2775	False	NA	NA	False	NA	NA	NA	10592166	10591989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10592000_10592200
ES.16077.3	chr18	-	4610	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	-65	0	-65	0	multi-exon	FALSE	canonical	3	113	junction_3	14.2393820090621	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	NA	False	NA	-6	True	ATTAAA	-21	NA	10610417	10566506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.4	chr18	-	4387	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	43.4275329403358	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCACTAGCTTGCAATT	0	True	NA	-6	True	ATTAAA	-21	NA	10610306	10566506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10593745_10595876_10596338_10596442_10610025
ES.16077.5	chr18	-	4338	11	NIC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	61.9862081434249	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTCACTAGCTTGCAAT	-2	True	NA	-7	True	ATTAAA	-20	NA	10610136	10566507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10577637_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10593745_10595876_10596338_10596442_10610025
ES.16077.6	chr18	-	4311	10	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	45	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.0954236391324	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTCACTAGCTTGCAAT	-1	True	NA	-7	True	ATTAAA	-20	NA	10610307	10566507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_10567647_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.7	chr18	-	4494	11	NNC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.7912374207617	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTCACTAGCTTGCAA	3	True	NA	-8	True	ATTAAA	-19	NA	10610351	10566508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10567647_10571954_10572143_10574874_10574971_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.8	chr18	-	4399	12	NNC	ENSMUSG00000024293.17	novel	4572	12	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	61.4897693566758	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTCTCACTAGCTTGC	4	True	NA	-10	True	ATTAAA	-17	NA	10610078	10566510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10567647_10571954_10572153_10574874_10575019_10577000_10577091_10577637_10577760_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ES.16077.9	chr18	-	3201	7	ISM	ENSMUSG00000024293.17	ENSMUST00000115864.8	2148	10	22650	-22	22604	5	3prime_fragment	FALSE	canonical	3	113	junction_3	17.0359097855742	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTTATATTGAATGT	7482	False	NA	-15	True	AATAAA	-39	NA	10587459	10566596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977
ES.16078.1	chr18	+	722	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	-12	148	-12	127	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATTTCTTTGAGTCC	NA	False	NA	25	True	AATACA	-16	NA	10617762	10628082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ES.16078.10	chr18	+	3226	5	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	6	2569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	814.528237693452	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGATCCAACTAAATG	-5	True	NA	NA	False	ATTAAA	-35	NA	10617801	10630799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793_10630211_10630384
ES.16078.11	chr18	+	3919	3	NNC	ENSMUSG00000002477.6	novel	670	3	NA	NA	12	15	intron_retention	FALSE	non_canonical	0	0	junction_2	958	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTGTCTGTTGATTG	1	True	NA	-14	True	AATAAA	-14	NA	10617807	10627970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10625021_10625560
ES.16078.12	chr18	+	4156	3	NNC	ENSMUSG00000002477.6	novel	670	3	NA	NA	12	-23	intron_retention	FALSE	non_canonical	0	0	junction_2	958	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAATGATTTTGCCT	1	True	NA	-15	True	NA	NA	NA	10617807	10628207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10625021_10625560
ES.16078.13	chr18	+	3140	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	17	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	899.23090595365	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTCTGTTGATTGTC	6	True	NA	-12	True	AATAAA	-16	NA	10617812	10627972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10625021_10625560_10627018_10627793
ES.16078.14	chr18	+	3312	5	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	26	2675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	814.528237693452	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTTAGTGGTCAAAAGA	15	True	NA	NA	False	NA	NA	NA	10617821	10630905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793_10630211_10630384
ES.16078.15	chr18	+	397	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	56	-14	-13	14	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTTGTCTGTTGATT	1	True	NA	-15	True	AATAAA	-13	NA	10617851	10627969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ES.16078.16	chr18	+	658	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	56	-275	-13	0	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	1	True	NA	8	True	AATAAA	-15	NA	10617851	10628230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ES.16078.2	chr18	+	867	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	NA	False	NA	8	True	AATAAA	-15	NA	10617765	10628230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ES.16078.3	chr18	+	2846	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	-5	-1983	-5	1983	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGAGCCGGGCGTGGTG	-37	True	NA	NA	False	NA	NA	NA	10617769	10630213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ES.16078.4	chr18	+	592	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	-26	-127	-5	127	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATTTCTTTGAGTCC	-37	True	NA	25	True	AATACA	-16	NA	10617769	10628082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ES.16078.5	chr18	+	517	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	-1	19	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_3	871.276075649963	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTCTGTTGATTGTCAA	-33	True	NA	-10	True	AATAAA	-18	NA	10617773	10627974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10623708_10626825_10626932_10627793
ES.16078.6	chr18	+	400	3	NNC	ENSMUSG00000002477.6	novel	670	3	NA	NA	-1	-954	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	956.5	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAGAAGCTGGTAC	-33	True	NA	NA	False	NA	NA	NA	10617773	10627001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10623708_10626831
ES.16078.7	chr18	+	3352	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	6	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	899.23090595365	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTTGGGATGAGATCT	-26	True	NA	19	True	AATAAA	-20	NA	10617780	10628152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10625021_10625560_10627018_10627793
ES.16078.8	chr18	+	2048	3	ISM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	8	-422	8	422	intron_retention	FALSE	canonical	3	1823	junction_2	46.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTGCATGTGCATAT	-24	True	NA	NA	False	ATTAAA	-18	NA	10617782	10628652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10617927_10623630_10623708_10626825
ES.16078.9	chr18	+	754	6	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	-7	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	934.006552439543	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTCTGTTGATTGT	-18	True	NA	-13	True	AATAAA	-15	NA	10617788	10627971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10617927_10623630_10623708_10624864_10625021_10625560_10625574_10626825_10627018_10627793
ES.16079.1	chr18	-	1933	10	NNC	ENSMUSG00000002475.17	novel	1962	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2.94392028877595	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTCTTTGTGAGTT	47	False	NA	NA	False	AATAAA	-13	NA	10706687	10644412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10654563_10654621_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ES.16079.2	chr18	-	1940	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	18	4	18	-2	multi-exon	FALSE	canonical	2	2	junction_1	3.63145976158349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTGTTTCTTTGTGAG	-19	True	NA	NA	False	AATAAA	-11	NA	10706753	10644414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ES.16079.3	chr18	-	5565	5	ISM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	16	9536	16	-1724	5prime_fragment	FALSE	canonical	2	5	junction_3	0.866025403784439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTAAAAATTAT	-21	True	NA	NA	False	AATAAA	-15	NA	10706755	10653946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ES.16079.4	chr18	-	284	1	Intergenic	novelGene_13417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	10019	False	NA	NA	False	NA	NA	NA	10696715	10696431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_10696400_10696700
ES.1608.1	chr1	+	2431	4	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTCTCTGGTATACCTC	NA	False	NA	NA	False	AATAAA	-17	NA	153225014	153262905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153225236_153253964_153254858_153255741_153255930_153261776
ES.16080.1	chr18	+	9400	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-38	138	intron_retention	FALSE	non_canonical	2	25	junction_1	17.5479905627145	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGGAGGCTATTCTT	NA	False	NA	45	True	AATAAA	-28	NA	10725509	10817766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.10	chr18	+	3850	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	11	6370	11	34	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTAATTTGTAATTT	11	True	NA	NA	False	NA	NA	NA	10725558	10812208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.11	chr18	+	10160	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	12	-2	intron_retention	FALSE	non_canonical	2	25	junction_1	17.5479905627145	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTATATTTTATCAT	12	True	NA	NA	False	AATAAA	-16	NA	10725559	10818576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.12	chr18	+	7288	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	12	-1924	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_1	17.5479905627145	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGTTTTTTTTTTT	12	True	NA	NA	False	TATAAA	-17	NA	10725559	10815704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.13	chr18	+	9335	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	12	124	intron_retention	FALSE	non_canonical	0	0	junction_1	22.1517135386501	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTCTCTGACTTTT	12	True	NA	31	True	AATAAA	-37	NA	10725559	10817752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725785_10725842_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.14	chr18	+	7877	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	12	2342	12	-1392	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTTAGCTTGTTTG	12	True	NA	NA	False	AATACA	-19	NA	10725559	10816236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.15	chr18	+	4553	22	NIC	ENSMUSG00000024294.15	novel	10231	21	NA	NA	16	0	intron_retention	FALSE	canonical	2	4	junction_21	21.3926683352826	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATATTTTATCATTG	16	True	NA	NA	False	AATAAA	-18	NA	10725563	10818578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10812157_10817818
ES.16080.16	chr18	+	9320	23	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	35	4	intron_retention	FALSE	non_canonical	0	0	junction_9	34.9647992999051	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCTGTATGGAAAAATGA	-10	True	NA	-89	True	AATAAA	-24	NA	10725582	10817632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760953_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10801458_10801582_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.17	chr18	+	6745	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	51	-2428	at_least_one_novel_splicesite	FALSE	non_canonical	2	25	junction_1	17.5479905627145	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGAAACAACCTTTTACT	6	True	NA	NA	False	NA	NA	NA	10725598	10815200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.18	chr18	+	4434	23	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_22	24.7743952732862	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTATATTTTATCAT	-2	True	NA	NA	False	AATAAA	-16	NA	10725623	10818576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10812157_10817818
ES.16080.19	chr18	+	3722	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-30	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	25.6223223256703	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGTTAATTTGTAATT	-1	True	NA	NA	False	NA	NA	NA	10725624	10812207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808131_10811984
ES.16080.2	chr18	+	10267	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	-36	0	-36	0	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATATTTTATCATTG	-5	True	NA	NA	False	AATAAA	-18	NA	10725511	10818578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.21	chr18	+	8333	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	2	-782	intron_retention	FALSE	non_canonical	2	25	junction_1	17.5479905627145	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGGTTTTCTAATTT	-2	True	NA	NA	False	CATAAA	-21	NA	10725656	10816846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.22	chr18	+	8386	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	113	1732	6	-782	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGTGGTTTTCTAATTT	2	True	NA	NA	False	CATAAA	-21	NA	10725660	10816846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.23	chr18	+	4335	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	168	5728	-28	676	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACATGAAAGGGCAAATT	57	False	NA	NA	False	AATAAA	-23	NA	10725715	10812850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.24	chr18	+	8562	18	NNC	ENSMUSG00000024294.15	novel	10231	21	NA	NA	14	112	intron_retention	FALSE	non_canonical	0	0	junction_13	28.445784041889	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTAATATGTTTT	99	False	NA	19	True	AATAAA	-25	NA	10725757	10817740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.25	chr18	+	2547	4	ISM	ENSMUSG00000024294.15	ENSMUST00000131073.2	1665	7	147	6742	147	-6742	5prime_fragment	FALSE	canonical	3	73	junction_1	9.10433352249844	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGATCAAATCTAGTGAG	232	False	NA	NA	False	AATAAA	-7	NA	10725890	10748957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355
ES.16080.26	chr18	+	6227	15	ISM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	29953	2342	-5308	-1392	3prime_fragment	FALSE	canonical	3	77	junction_3	10.1027880572945	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTTAGCTTGTTTG	7623	False	NA	NA	False	AATACA	-19	NA	10755500	10816236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.27	chr18	+	2585	1	NIC	ENSMUSG00000024294.15	novel	10231	21	NA	NA	-1021	-6427	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGATGATTTCA	NA	False	NA	NA	False	NA	NA	NA	10759787	10762372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_10759800_10762400
ES.16080.28	chr18	+	3751	1	NIC	ENSMUSG00000024294.15	novel	10231	21	NA	NA	15611	11371	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTAGAGAAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	10776419	10780170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_10776400_10780200
ES.16080.29	chr18	+	6810	9	ISM	ENSMUSG00000024294.15	ENSMUST00000124288.8	2841	15	32083	964	-5473	112	internal_fragment	FALSE	canonical	3	83	junction_7	10.0623058987491	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTAATATGTTTT	NA	False	NA	19	True	AATAAA	-25	NA	10792891	10817740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.3	chr18	+	7299	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-15	-1925	intron_retention	FALSE	non_canonical	0	0	junction_21	22.1517135386501	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGTTTTTTTTTT	-15	True	NA	NA	False	TATAAA	-16	NA	10725532	10815703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10813197_10813268
ES.16080.30	chr18	+	5304	9	ISM	ENSMUSG00000024294.15	ENSMUST00000124288.8	2841	15	32085	2468	-5471	-1392	internal_fragment	FALSE	canonical	3	83	junction_7	10.0623058987491	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTTAGCTTGTTTG	NA	False	NA	NA	False	AATACA	-19	NA	10792893	10816236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.31	chr18	+	6564	8	ISM	ENSMUSG00000024294.15	ENSMUST00000124288.8	2841	15	33667	1076	-3889	0	internal_fragment	FALSE	canonical	3	83	junction_6	10.6349443259627	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTCTGTATGGAAAA	NA	False	NA	-93	True	AATAAA	-20	NA	10794475	10817628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.32	chr18	+	7010	7	NNC	ENSMUSG00000024294.15	novel	2721	7	NA	NA	95	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	37.0843632815773	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTATATTTTATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	10798459	10818576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10816081_10816223
ES.16080.33	chr18	+	7083	5	ISM	ENSMUSG00000024294.15	ENSMUST00000150000.2	2721	7	1689	-950	1689	0	intron_retention	FALSE	canonical	3	83	junction_3	12.4096736459909	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATATTTTATCATTG	NA	False	NA	NA	False	AATAAA	-18	NA	10800053	10818578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.34	chr18	+	6136	6	NNC	ENSMUSG00000024294.15	novel	2721	7	NA	NA	1701	124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.3564121299206	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTCTCTGACTTTT	NA	False	NA	31	True	AATAAA	-37	NA	10800065	10817752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984_10812157_10812265
ES.16080.35	chr18	+	3712	1	Genic_Intron	novelGene_13418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGAATTTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	10808134	10811846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Intron_chr18_+_10808100_10811800
ES.16080.36	chr18	+	4267	1	ISM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	86587	2177	13770	-1227	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTGTGTGTGTTG	NA	False	NA	NA	False	ACTAAA	-21	NA	10812134	10816401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_10812100_10816400
ES.16080.4	chr18	+	9417	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	-8	822	-8	128	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTTTTTGGA	-8	True	NA	35	True	AATAAA	-41	NA	10725539	10817756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.5	chr18	+	8991	23	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-4	122	intron_retention	FALSE	non_canonical	0	0	junction_2	25.3824058931698	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTTTTCTCTGACTT	-4	True	NA	29	True	AATAAA	-35	NA	10725543	10817750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726020_10726378_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.6	chr18	+	9229	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	-1	4	intron_retention	FALSE	non_canonical	2	25	junction_1	17.5479905627145	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCTGTATGGAAAAATGA	-1	True	NA	-89	True	AATAAA	-24	NA	10725546	10817632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.8	chr18	+	7829	22	NNC	ENSMUSG00000024294.15	novel	3216	22	NA	NA	5	-1390	intron_retention	FALSE	non_canonical	2	25	junction_1	17.5479905627145	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTAGCTTGTTTGAA	5	True	NA	NA	False	AATACA	-21	NA	10725552	10816238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_10725780_10725836_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16080.9	chr18	+	9274	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	11	946	11	4	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCTGTATGGAAAAATGA	11	True	NA	-89	True	AATAAA	-24	NA	10725558	10817632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ES.16081.1	chr18	-	6495	6	Antisense	novelGene_ENSMUSG00000087816.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAGAGTTCTGAAAGAT	7941	False	NA	NA	False	NA	NA	NA	10779750	10750325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_10752025_10755500_10755688_10760803_10760948_10763187_10763323_10768123_10768230_10775526
ES.16082.1	chr18	-	5159	1	Antisense	novelGene_ENSMUSG00000024294.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTCAAATTATACTTAGA	NA	False	NA	NA	False	TTTAAA	-13	NA	10819182	10814023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_10814000_10819200
ES.16083.1	chr18	+	1748	3	ISM	ENSMUSG00000005836.11	ENSMUST00000047762.10	3234	7	-18	26282	-18	3	5prime_fragment	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAGAAAAAAAGAAAAGGA	4821	False	NA	NA	False	NA	NA	NA	11052451	11059353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_11052744_11054035_11055190_11059051
ES.16083.2	chr18	+	3088	7	FSM	ENSMUSG00000005836.11	ENSMUST00000047762.10	3234	7	144	2	106	-2	multi-exon	FALSE	canonical	1	1	junction_2	0.897527467855751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCCTTCCTTTTCATC	-8	True	NA	NA	False	AATAAA	-28	NA	11052613	11085633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11052744_11054035_11055190_11059051_11059219_11063017_11063144_11064509_11064598_11064687_11064792_11084314
ES.16084.1	chr18	+	156	1	Intergenic	novelGene_13419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7317	False	NA	NA	False	NA	NA	NA	11640689	11640845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_11640700_11640800
ES.16085.1	chr18	-	177	1	Intergenic	novelGene_13420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11744890	11744713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_11744700_11744900
ES.16086.1	chr18	+	1342	1	Genic_Genomic	ENSMUSG00000041238.17	novel	NA	NA	NA	NA	-228	-15217	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTTTTTTCTGTTTTC	3017	False	NA	NA	False	ATTAAA	-22	NA	11790211	11791553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_11790200_11791600
ES.16086.10	chr18	+	3796	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	51.6930637465625	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATGTGGATGTGTTAC	3246	False	NA	15	True	ATTAAA	-37	NA	11790440	11875941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791286_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.11	chr18	+	3161	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	1	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.3739226884695	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3246	False	NA	21	True	ATTAAA	-43	NA	11790440	11875947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838853_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.14	chr18	+	3269	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	7	117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.3739226884695	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACGGCTGTTGTAGTCT	3252	False	NA	2	True	NA	NA	NA	11790446	11876052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838844_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.15	chr18	+	3577	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-39	-329	7	0	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTGTTGTTGTTGTT	3252	False	NA	NA	False	AATATA	-21	NA	11790446	11876264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.16	chr18	+	5461	18	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	7	-43	intron_retention	FALSE	canonical	3	177	junction_1	20.9590142138558	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTATTAAAAGTGTTT	3252	False	NA	-34	True	TATAAA	-16	NA	11790446	11875892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11874125_11875672
ES.16086.17	chr18	+	3315	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	10	121	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	47.134428192009	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCTGTTGTAGTCTATAA	3255	False	NA	6	True	NA	NA	NA	11790449	11876056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.18	chr18	+	3004	17	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	11	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	54.8762457147899	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAAAATGTGGATGTGT	3256	False	NA	12	True	ATTAAA	-34	NA	11790450	11875938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.2	chr18	+	3412	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-77	-126	-31	126	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTAGTCTATAATTTAT	3214	False	NA	11	True	NA	NA	NA	11790408	11876061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.20	chr18	+	3259	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-9	125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.3739226884695	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTAGTCTATAATTTA	3261	False	NA	10	True	NA	NA	NA	11790455	11876060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838853_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.21	chr18	+	3116	18	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-9	-80	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	53.3352003710112	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTTGATCCTCTATA	3261	False	NA	2	True	AATAAA	-13	NA	11790455	11875855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11790750_11793791_11793999_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.22	chr18	+	3182	20	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-8	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	51.1821471644718	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATATACCAACCATACAAAT	3262	False	NA	-7	True	ATTAAA	-15	NA	11790456	11875919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855120_11855159_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.23	chr18	+	3525	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	2	122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.0646856748496	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGTTGTAGTCTATAAT	3273	False	NA	7	True	NA	NA	NA	11790467	11876057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838853_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.25	chr18	+	3031	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	34	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.8647370012734	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3325	False	NA	21	True	ATTAAA	-43	NA	11790519	11875947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838853_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.26	chr18	+	3015	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-31	-70	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.116322885552	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTATAAAATGATTTA	3673	False	NA	12	True	AATAAA	-23	NA	11790867	11875865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791008_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.27	chr18	+	3056	18	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	65.3838281435017	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3682	False	NA	9	True	ATTAAA	-31	NA	11790876	11875935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.29	chr18	+	3139	20	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.8484650840605	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3682	False	NA	9	True	ATTAAA	-31	NA	11790876	11875935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11811107_11811244_11826068_11826182_11829799_11829867_11838844_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.3	chr18	+	3236	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-24	8	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	47.134428192009	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGTGTTACTT	3221	False	NA	17	True	ATTAAA	-39	NA	11790415	11875943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.30	chr18	+	3052	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-22	4	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	60.0363315927207	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAATGTGGATGTGTT	3682	False	NA	13	True	ATTAAA	-35	NA	11790876	11875939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.32	chr18	+	2979	18	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.8900730770866	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAATAACTAAAATGTG	3700	False	NA	5	True	ATTAAA	-27	NA	11790894	11875931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.33	chr18	+	3369	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.0795129546985	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAAAATGTGGATGTGT	3703	False	NA	12	True	ATTAAA	-34	NA	11790897	11875938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791286_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853566_11853715_11854696_11855583_11855660_11855788_11858465_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.34	chr18	+	2817	17	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	1	-16	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	67.3784785743935	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATATACCAACCATACAAAT	3705	False	NA	-7	True	ATTAAA	-15	NA	11790899	11875919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.35	chr18	+	3093	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	63.5725744501685	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGTGTTACTT	3705	False	NA	17	True	ATTAAA	-39	NA	11790899	11875943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867523_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.36	chr18	+	3528	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.2490234707758	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAATGTGGATGTGTT	3705	False	NA	13	True	ATTAAA	-35	NA	11790899	11875939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829871_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875228
ES.16086.37	chr18	+	3191	20	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	1	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.3873469327733	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTCTATTAAAAGTG	3705	False	NA	36	True	TATAAA	-13	NA	11790899	11875889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11808099_11808261_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.38	chr18	+	3198	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	3	124	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTCTATAATTT	3707	False	NA	9	True	NA	NA	NA	11790901	11876059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.39	chr18	+	2975	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.0646856748496	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGTGTTACTT	3709	False	NA	17	True	ATTAAA	-39	NA	11790903	11875943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838853_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.4	chr18	+	3563	20	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-24	123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.3885660669901	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTGTAGTCTATAATT	3221	False	NA	8	True	NA	NA	NA	11790415	11876058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11808099_11808261_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.41	chr18	+	3017	18	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	5	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.8900730770866	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGTGTTACTT	3709	False	NA	17	True	ATTAAA	-39	NA	11790903	11875943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11853566_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.42	chr18	+	3037	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	63.800155772092	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAATAACTAAAATGTG	3721	False	NA	5	True	ATTAAA	-27	NA	11790915	11875931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853696_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.43	chr18	+	3055	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	17	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	63.9682840009382	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATGTGGATGTGTTAC	3721	False	NA	15	True	ATTAAA	-37	NA	11790915	11875941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855572_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.44	chr18	+	5732	18	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	21	0	intron_retention	FALSE	canonical	3	38	junction_1	45.5825043836158	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3725	False	NA	9	True	ATTAAA	-31	NA	11790919	11875935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.45	chr18	+	3204	20	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	21	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.7220203744352	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3725	False	NA	21	True	ATTAAA	-43	NA	11790919	11875947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11811107_11811244_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.46	chr18	+	2995	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	51.4816580066252	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3732	False	NA	9	True	ATTAAA	-31	NA	11790926	11875935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790977_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.47	chr18	+	3051	19	NNC	ENSMUSG00000041238.17	novel	781	8	NA	NA	47	126	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.2012317160033	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTAGTCTATAATTTAT	3751	False	NA	11	True	NA	NA	NA	11790945	11876061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790977_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.48	chr18	+	2857	17	ISM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	15151	-117	11701	117	3prime_fragment	FALSE	canonical	3	177	junction_1	21.065003560408	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACGGCTGTTGTAGTCT	NA	False	NA	2	True	NA	NA	NA	11805636	11876052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.49	chr18	+	1811	4	ISM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	75730	78	-5341	-78	3prime_fragment	FALSE	canonical	3	224	junction_1	7.1336448530109	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTGATCCTCTATAAA	NA	False	NA	4	True	AATAAA	-15	NA	11866215	11875857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.5	chr18	+	3287	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	-62	-16	-16	16	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTACTTTTTTTCTT	3229	False	NA	25	True	ACTAAA	-6	NA	11790423	11875951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.6	chr18	+	3564	19	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-16	12	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3229	False	NA	21	True	ATTAAA	-43	NA	11790423	11875947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.7	chr18	+	3316	19	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-14	12	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	50.9122944719157	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATGTGTTACTTTTTT	3231	False	NA	21	True	ATTAAA	-43	NA	11790425	11875947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853566_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16086.9	chr18	+	3198	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	-2	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.1986985176977	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATAAATGAGTTTTC	3243	False	NA	25	True	AATAAA	-36	NA	11790437	11875878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829871_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853709_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ES.16087.1	chr18	-	2393	1	FSM	ENSMUSG00000117634.2	ENSMUST00000235010.2	2365	1	-23	-5	-23	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCTATGATTATTGTG	NA	False	NA	NA	False	AAAAAG	-7	NA	11790864	11788471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_11788500_11790900
ES.16088.1	chr18	-	180	1	Intergenic	novelGene_13421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAGGACAC	NA	False	NA	NA	False	NA	NA	NA	11805020	11804840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_11804800_11805000
ES.16089.1	chr18	-	2100	1	Intergenic	novelGene_13422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11809518	11807418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_11807400_11809500
ES.1609.1	chr1	+	180	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	271	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGCAAATGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	153287687	153292539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153287738_153292409
ES.1609.2	chr1	+	177	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGCAAATGAAGA	NA	False	NA	NA	False	NA	NA	NA	153287687	153292537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153287806_153292478
ES.1609.4	chr1	+	176	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGCAAATGAAG	NA	False	NA	NA	False	NA	NA	NA	153287688	153292536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153287699_153292370
ES.1609.5	chr1	+	177	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGCAAATGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	153287688	153287865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153287700_153287900
ES.1609.8	chr1	+	173	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGCAAATGAAG	NA	False	NA	NA	False	NA	NA	NA	153287690	153292536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153287768_153292440
ES.1609.9	chr1	+	180	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGCAAATGAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	153292360	153292540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153292400_153292500
ES.16090.1	chr18	-	191	1	Intergenic	novelGene_13423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTGCTAGGAACT	NA	False	NA	NA	False	NA	NA	NA	11832429	11832238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_11832200_11832400
ES.16091.1	chr18	-	181	1	Intergenic	novelGene_13424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGGAATGTGTCCG	NA	False	NA	NA	False	NA	NA	NA	11834952	11834771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_11834800_11835000
ES.16092.1	chr18	+	3363	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	31	2	-23	-2	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATGTGTGTGTGAACA	NA	False	NA	NA	False	ATTAAA	-23	NA	11972307	12078681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
ES.16092.2	chr18	+	3075	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	193	-66	193	0	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAACATGTCAC	NA	False	NA	NA	False	ATTAAA	-29	NA	11972523	12078687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
ES.16092.3	chr18	+	3767	4	NNC	ENSMUSG00000040957.16	novel	3202	9	NA	NA	250	-51160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.8030730348939	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACAGGGCTTTAAAAGCC	NA	False	NA	NA	False	AATAAA	-13	NA	11972580	12027461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11973591_12015770_12015843_12021793_12021887_12024869
ES.16092.4	chr18	+	3845	4	ISM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	317	37019	263	-36957	5prime_fragment	FALSE	canonical	3	30	junction_3	6.84754619472471	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCATGCCTGTGAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	11972593	12041664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981
ES.16092.5	chr18	+	5966	9	NNC	ENSMUSG00000040957.16	novel	3202	9	NA	NA	270	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.0618055384079	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAATGTGTGTGTGAAC	NA	False	NA	NA	False	ATTAAA	-22	NA	11972600	12078680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12075880_12075977
ES.16092.6	chr18	+	2869	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	324	203	270	-141	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGCATGATTGGTGTCT	NA	False	NA	NA	False	TATAAA	-16	NA	11972600	12078480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
ES.16092.7	chr18	+	172	1	Intergenic	novelGene_13425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAATCT	NA	False	NA	NA	False	NA	NA	NA	11987192	11987364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_11987200_11987400
ES.16092.8	chr18	+	1306	2	NNC	ENSMUSG00000040957.16	novel	2447	9	NA	NA	97060	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAATGTGTGTGTGAAC	NA	False	NA	NA	False	ATTAAA	-22	NA	12074416	12078680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12074560_12077517
ES.16093.1	chr18	-	2881	1	FSM	ENSMUSG00000097440.3	ENSMUST00000224036.2	2779	1	35	-137	35	137	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGGGGGAAATCACTAA	NA	False	NA	NA	False	AATAAA	-17	NA	11973891	11971010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_11971000_11973900
ES.16093.2	chr18	-	2107	1	FSM	ENSMUSG00000097440.3	ENSMUST00000224036.2	2779	1	8	664	8	-664	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTCTGTTTGGCCCCTGG	NA	False	NA	NA	False	TATAAA	-30	NA	11973918	11971811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_11971800_11973900
ES.16094.1	chr18	-	4670	1	Intergenic	novelGene_13426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAAGTGTAGTTATC	5670	False	NA	NA	False	NA	NA	NA	12055756	12051086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12051100_12055800
ES.16095.1	chr18	-	179	1	Intergenic	novelGene_13427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	12063056	12062877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12062900_12063100
ES.16096.1	chr18	+	2594	2	Antisense	novelGene_ENSMUSG00000049411.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12099064	12106600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_12101601_12106542
ES.16097.1	chr18	-	4334	16	NNC	ENSMUSG00000049411.16	novel	2653	16	NA	NA	-2	1585	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.48896499194337	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCTGGCCTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	12254596	12095921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12097716_12115027_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.11	chr18	-	4192	12	NIC	ENSMUSG00000049411.16	novel	1426	15	NA	NA	0	1335	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	6.98640947521486	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTTCTTTTCTTTT	NA	False	NA	NA	False	TATAAA	-7	NA	12254537	12113199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.12	chr18	-	3803	8	NNC	ENSMUSG00000049411.16	novel	2802	13	NA	NA	7436	1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.31095470674304	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGGCATGGTGGT	NA	False	NA	NA	False	TATAAA	-23	NA	12200252	12113429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12166256_12166403_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116
ES.16097.13	chr18	-	3126	5	NNC	ENSMUSG00000049411.16	novel	2802	13	NA	NA	16495	703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.45576726264388	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCCTCTGCCCTTTCA	3949	False	NA	NA	False	TATAAA	-24	NA	12191193	12113831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191115
ES.16097.14	chr18	-	3917	15	NNC	ENSMUSG00000049411.16	novel	1426	15	NA	NA	-17	703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.98297709843571	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCCTCTGCCCTTTCA	NA	False	NA	NA	False	TATAAA	-24	NA	12254554	12113831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12152399_12152670_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12254437
ES.16097.15	chr18	-	3712	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	14	-2300	-2	702	multi-exon	FALSE	canonical	3	13	junction_4	4.03871569806491	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGCCTCTGCCCTTTC	NA	False	NA	NA	False	TATAAA	-23	NA	12254573	12113832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.16	chr18	-	2367	12	NIC	ENSMUSG00000049411.16	novel	1426	15	NA	NA	4	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	7.30900045172428	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCATGTGCATAATGAG	NA	False	NA	NA	False	TTTAAA	-31	NA	12254583	12114980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12254437
ES.16097.17	chr18	-	2486	14	NIC	ENSMUSG00000049411.16	novel	2597	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.85176952050565	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATGTTTATAAGC	NA	False	NA	NA	False	TTTAAA	-17	NA	12254574	12114994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12116651_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.18	chr18	-	2564	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	-3	-1135	-3	0	multi-exon	FALSE	canonical	3	13	junction_4	4.03871569806491	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATGTTTATA	NA	False	NA	NA	False	TTTAAA	-14	NA	12254590	12114997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.2	chr18	-	1904	2	NNC	ENSMUSG00000049411.16	novel	670	10	NA	NA	100117	1584	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGCTGGCCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	12107571	12095922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12097716_12107460
ES.16097.20	chr18	-	2250	8	NNC	ENSMUSG00000049411.16	novel	2653	16	NA	NA	7400	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.31095470674304	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATGTTTATA	NA	False	NA	NA	False	TTTAAA	-14	NA	12200288	12114997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12141417_12141543_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116
ES.16097.21	chr18	-	2695	14	NNC	ENSMUSG00000049411.16	novel	2653	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.11075831968796	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTCTGTATGTTTATA	NA	False	NA	NA	False	TTTAAA	-14	NA	12254576	12114997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12152399_12152670_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12254437
ES.16097.22	chr18	-	2095	8	NNC	ENSMUSG00000049411.16	novel	2597	15	NA	NA	7330	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.89393280929908	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGTCTGTATGTTTA	NA	False	NA	NA	False	TTTAAA	-12	NA	12200358	12114999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116700_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12200309
ES.16097.23	chr18	-	174	1	Intergenic	novelGene_13429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	12133817	12133643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12133600_12133800
ES.16097.3	chr18	-	209	1	Intergenic	novelGene_13428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCACCTCTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	12096798	12096589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12096600_12096800
ES.16097.4	chr18	-	3736	3	NNC	ENSMUSG00000049411.16	novel	2802	13	NA	NA	55091	1357	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTATATTCCTTTTTA	NA	False	NA	NA	False	TATAAA	-29	NA	12152597	12113177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12152399
ES.16097.5	chr18	-	4355	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	17	-2946	1	1348	multi-exon	FALSE	canonical	3	13	junction_4	4.03871569806491	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTAAGACCTATAT	NA	False	NA	NA	False	TATAAA	-20	NA	12254570	12113186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ES.16097.6	chr18	-	3878	8	ISM	ENSMUSG00000049411.16	ENSMUST00000055447.14	2597	15	53192	-1802	6309	1342	3prime_fragment	FALSE	canonical	1	1	junction_1	7.7275019064563	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTTTTTAAGAC	NA	False	NA	NA	False	TATAAA	-14	NA	12201379	12113192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_12116700_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354
ES.16097.7	chr18	-	5727	4	ISM	ENSMUSG00000049411.16	ENSMUST00000050228.15	2802	13	71794	-1342	24957	1342	3prime_fragment	FALSE	canonical	3	15	junction_2	2.86744175568088	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTTTTTAAGAC	8267	False	NA	NA	False	TATAAA	-14	NA	12182731	12113192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621
ES.16097.8	chr18	-	3777	6	NNC	ENSMUSG00000049411.16	novel	2802	13	NA	NA	15500	1341	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	7.5736384915046	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTCTTTTTTAAGA	2954	False	NA	NA	False	TATAAA	-13	NA	12192188	12113193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12192132
ES.16097.9	chr18	-	4225	13	NIC	ENSMUSG00000049411.16	novel	1426	15	NA	NA	-4	1338	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	7.00545422430901	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCTTTTCTTTTTTA	NA	False	NA	NA	False	TATAAA	-10	NA	12254575	12113196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12254437
ES.16098.1	chr18	-	3071	1	Intergenic	novelGene_13430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAACCAATTTTATAC	NA	False	NA	NA	False	NA	NA	NA	12261189	12258118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12258100_12261200
ES.16099.1	chr18	+	2075	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	-172	1887	-172	2	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGATAATATAATTCT	5333	False	NA	13	True	AATAAA	-23	NA	12261625	12288557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.10	chr18	+	2588	6	ISM	ENSMUSG00000024404.8	ENSMUST00000234148.2	3078	13	-3	15499	-3	1857	5prime_fragment	FALSE	canonical	3	395	junction_3	13.7054733592095	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	5516	False	NA	NA	False	NA	NA	NA	12261808	12274259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373
ES.16099.11	chr18	+	5372	3	NNC	ENSMUSG00000024404.8	novel	1477	3	NA	NA	-1	1857	intron_retention	FALSE	non_canonical	0	0	junction_2	215.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	5518	False	NA	NA	False	NA	NA	NA	12261810	12274259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12262031_12268908_12271319_12271517
ES.16099.12	chr18	+	3175	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	0	-4	intron_retention	FALSE	canonical	3	378	junction_7	18.578402105493	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	5519	False	NA	6	True	ATTAAA	-18	NA	12261811	12289754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.14	chr18	+	3508	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	16	266	2	-266	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGTCTTATTTTAT	5521	False	NA	NA	False	AGTAAA	-17	NA	12261813	12290178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.15	chr18	+	2940	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	119.455790778067	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTCATTGTGTGGTT	5521	False	NA	8	True	ATTAAA	-20	NA	12261813	12289756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.16	chr18	+	3613	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	395	junction_3	16.4869094077144	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	5522	False	NA	6	True	ATTAAA	-18	NA	12261814	12289754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.18	chr18	+	1577	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	119.430812641732	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGATAATATAATT	5526	False	NA	11	True	AATAAA	-21	NA	12261818	12288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12281903_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.19	chr18	+	1752	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	114.557142260861	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGATAATATAATT	5526	False	NA	11	True	AATAAA	-21	NA	12261818	12288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.2	chr18	+	3136	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	-29	683	-29	3	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTGTGGTTAATTC	5476	False	NA	13	True	ATTAAA	-25	NA	12261768	12289761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.20	chr18	+	3067	13	NNC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	113.608122753417	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	5529	False	NA	6	True	ATTAAA	-18	NA	12261821	12289754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286978_12287078_12288276
ES.16099.21	chr18	+	3205	13	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	114.526440421221	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGGTTCATTGTGT	5529	False	NA	4	True	ATTAAA	-16	NA	12261821	12289752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276252_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.22	chr18	+	3129	11	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	395	junction_2	16.6565302509256	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGATAATATAATT	5532	False	NA	11	True	AATAAA	-21	NA	12261824	12288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.23	chr18	+	2263	11	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	17	junction_6	120.143081365512	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGATAATATAATT	5545	False	NA	11	True	AATAAA	-21	NA	12261837	12288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12281847_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.24	chr18	+	3787	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	378	junction_7	18.7087286827732	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTCATTGTGTGGTT	5545	False	NA	8	True	ATTAAA	-20	NA	12261837	12289756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.25	chr18	+	1670	12	ISM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	7109	1889	-846	0	3prime_fragment	FALSE	canonical	3	378	junction_7	17.6419859829184	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAGGATAATATAATT	NA	False	NA	11	True	AATAAA	-21	NA	12268906	12288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.26	chr18	+	4299	10	NNC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	92	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	130.161533070866	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTCATTGTGTGGTT	NA	False	NA	8	True	ATTAAA	-20	NA	12270060	12289756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12270093_12270296_12271319_12271517_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.27	chr18	+	4245	6	ISM	ENSMUSG00000024404.8	ENSMUST00000235084.2	1365	8	7516	-1194	-585	-2	3prime_fragment	FALSE	canonical	3	378	junction_1	22.2261107708929	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTCATTGTGTGGTT	NA	False	NA	8	True	ATTAAA	-20	NA	12279719	12289756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.28	chr18	+	3100	5	NNC	ENSMUSG00000024404.8	novel	544	6	NA	NA	-459	-4	intron_retention	FALSE	canonical	0	0	junction_2	182.587479034024	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	NA	False	NA	6	True	ATTAAA	-18	NA	12281413	12289754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12282736_12285855_12285937_12286006_12286118_12286969_12287078_12288276
ES.16099.3	chr18	+	3787	10	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	17	junction_4	126.152269348309	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGGTTCATTGTGTGG	5504	False	NA	6	True	ATTAAA	-18	NA	12261796	12289754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12270093_12270296_12270407_12272373_12272518_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.4	chr18	+	3018	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	116.834629192343	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTGGTTAATTCT	5505	False	NA	14	True	ATTAAA	-26	NA	12261797	12289762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286969_12287078_12288276
ES.16099.5	chr18	+	1777	13	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-5	21	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	114.685893494652	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATAGATGTGTAGCCACA	5514	False	NA	39	True	AATATA	-12	NA	12261806	12288583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12281903_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.6	chr18	+	1408	10	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	130.822186361658	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGATAATATAATTCT	5514	False	NA	13	True	AATAAA	-23	NA	12261806	12288557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.7	chr18	+	3769	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	9	12	-5	-12	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACCAATGCAAGGGTGA	5514	False	NA	NA	False	NA	NA	NA	12261806	12290432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ES.16099.8	chr18	+	4357	6	NNC	ENSMUSG00000024404.8	novel	1306	6	NA	NA	-4	1857	intron_retention	TRUE	non_canonical	0	0	junction_5	163.30535814847	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	5515	False	NA	NA	False	NA	NA	NA	12261807	12274259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12271319_12271517
ES.16099.9	chr18	+	5219	4	NNC	ENSMUSG00000024404.8	novel	1477	3	NA	NA	-4	1905	intron_retention	FALSE	non_canonical	0	0	junction_3	197.332770269467	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGTTCTTGCAGAG	5515	False	NA	NA	False	NA	NA	NA	12261807	12274307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12262031_12268908_12270093_12270296_12271319_12271517
ES.161.1	chr1	+	187	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATATATATAAACATAAAA	NA	False	NA	NA	False	NA	NA	NA	18083369	18083556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_18083400_18083600
ES.1610.1	chr1	-	491	3	NNC	ENSMUSG00000073538.11	novel	1956	3	NA	NA	2	641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTGGGCCAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	153283534	153279931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153280107_153282218_153282348_153283347
ES.1610.2	chr1	-	1540	1	NIC	ENSMUSG00000073538.11	novel	1964	2	NA	NA	2	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGAGGGGTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	153283534	153281994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153282000_153283500
ES.1610.3	chr1	-	768	4	NNC	ENSMUSG00000073538.11	novel	766	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.7785346584314	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGAGGGGTGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	153289976	153281994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153282348_153283347_153283436_153284082_153284324_153289890
ES.1610.5	chr1	-	1458	2	NNC	ENSMUSG00000073538.11	novel	1964	2	NA	NA	2	-46	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGATTGTGTTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	153283534	153282038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153283201_153283238
ES.1610.6	chr1	-	422	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	3	1539	3	-119	multi-exon	FALSE	canonical	3	87	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTTTTTCTATGCT	NA	False	NA	NA	False	NA	NA	NA	153283533	153282111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153282348_153283347
ES.1610.7	chr1	-	3637	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	3	-4347	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCTTTCTAAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	153289976	153286339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153286300_153290000
ES.1610.8	chr1	-	663	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	3	-7321	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAATAAATGA	NA	False	NA	NA	False	NA	NA	NA	153289976	153289313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153289300_153290000
ES.16100.1	chr18	-	422	1	Intergenic	novelGene_13431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	12292564	12292142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12292100_12292600
ES.16101.1	chr18	-	160	1	Intergenic	novelGene_13432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	8865	False	NA	NA	False	NA	NA	NA	12296816	12296656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_12296700_12296800
ES.16102.1	chr18	+	2185	20	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	2	23	junction_12	65.5135265473079	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGCTAACTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	12301741	12323057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.10	chr18	+	2096	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.866992980723	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301789	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313834_12314640_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322229_12322443_12322862
ES.16102.11	chr18	+	2004	17	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_11	98.6771883466488	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301789	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12313541_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.12	chr18	+	2489	19	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-6	3	intron_retention	FALSE	non_canonical	0	0	junction_8	71.6815014792588	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGCTAACTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	12301789	12323057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314638_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.13	chr18	+	1212	8	NIC	ENSMUSG00000024410.16	novel	1282	9	NA	NA	-5	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	107.091035086595	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTGATGTTTGGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	12301790	12314181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722
ES.16102.14	chr18	+	4365	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-5	3	intron_retention	FALSE	canonical	3	252	junction_8	24.5299640399751	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTAATAAAGTACCTA	NA	False	NA	NA	False	AATAAA	-18	NA	12301790	12323027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.15	chr18	+	3032	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_5	107.471106727173	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301790	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12311680_12311798_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.16	chr18	+	2139	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	70.4013818801671	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGCTAACTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	12301794	12323057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322229_12322443_12322862
ES.16102.17	chr18	+	2042	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	65.1417258325602	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301794	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.18	chr18	+	2680	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	69.772721653814	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGTTAAAGTGACAGA	NA	False	NA	NA	False	NA	NA	NA	12301794	12323709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
ES.16102.19	chr18	+	2390	18	NIC	ENSMUSG00000024410.16	novel	2297	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	252	junction_9	23.863655387281	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301796	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12322139_12322216_12322443_12322862
ES.16102.2	chr18	+	2194	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	-21	-3	-21	3	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGCTAACTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	12301752	12323057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.20	chr18	+	2205	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	252	junction_9	23.5644637243728	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301796	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12322139_12322216_12322443_12322862
ES.16102.21	chr18	+	2172	19	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_17	93.2016266482326	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301799	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322229_12322443_12322862
ES.16102.22	chr18	+	2097	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	93.4476315044689	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301799	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304617_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314748_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.23	chr18	+	3546	16	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	10	-2	intron_retention	FALSE	canonical	3	252	junction_9	23.1234368841082	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTTGCTAACTC	NA	False	NA	NA	False	AATAAA	-43	NA	12301818	12323052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12318813_12321265_12321386_12321616_12321695_12321876_12322443_12322862
ES.16102.24	chr18	+	3005	18	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	10	0	intron_retention	FALSE	canonical	3	259	junction_15	23.5160256039921	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	AATAAA	-22	NA	12301818	12323031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.25	chr18	+	2289	21	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	25	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.000467288699	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGTTGTCTGCATCCTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	12301833	12322794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12311680_12311798_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322540
ES.16102.26	chr18	+	3036	17	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	47	0	intron_retention	FALSE	canonical	2	23	junction_10	70.6288439219417	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	AATAAA	-22	NA	12301855	12323031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12322139_12322216_12322443_12322862
ES.16102.27	chr18	+	1321	13	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	85.0971258817437	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAAATGTTGCTAACTC	NA	False	NA	NA	False	AATAAA	-43	NA	12312630	12323052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.28	chr18	+	1345	7	NIC	ENSMUSG00000024410.16	novel	2297	19	NA	NA	-1327	-6	intron_retention	FALSE	canonical	3	267	junction_1	30.5050086962052	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCCTCAAATGTTGCTA	NA	False	NA	NA	False	AATAAA	-39	NA	12317160	12323048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12322443_12322862
ES.16102.3	chr18	+	2298	18	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-5	0	intron_retention	FALSE	canonical	2	23	junction_12	69.0088505431528	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATAAAGTACCTACAAC	NA	False	NA	NA	False	AATAAA	-22	NA	12301768	12323031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12322443_12322862
ES.16102.4	chr18	+	2294	20	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	1	2	junction_19	69.9209288274165	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGTTAAAGTGACAGA	NA	False	NA	NA	False	NA	NA	NA	12301770	12323709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12323396
ES.16102.5	chr18	+	2831	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	0	-661	0	0	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAAGTGACAGAACTATC	NA	False	NA	NA	False	NA	NA	NA	12301773	12323715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.6	chr18	+	1953	20	NNC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	91.3406457903994	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	AATAAA	-45	NA	12301773	12323054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321358_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
ES.16102.7	chr18	+	2302	19	NIC	ENSMUSG00000024410.16	novel	2297	19	NA	NA	3	0	intron_retention	FALSE	canonical	2	23	junction_11	67.3063064570393	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301776	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.8	chr18	+	2072	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-11	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	72.123201349077	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGCTAACTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	12301784	12323057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16102.9	chr18	+	2833	18	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	-7	0	intron_retention	FALSE	canonical	2	2	junction_6	73.5423047519949	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAATAAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	12301788	12323024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12313541_12313632_12313722_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ES.16103.1	chr18	-	9963	1	Genic_Genomic	ENSMUSG00000024413.15	novel	NA	NA	NA	NA	2323	7707	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAGAGT	NA	False	NA	NA	False	AATAAA	-10	NA	12325004	12315041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_12315000_12325000
ES.16103.10	chr18	-	4844	23	NIC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	14.581206062872	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369443	12322750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.11	chr18	-	4940	24	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-14	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	12.836620582432	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369429	12322750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332719_12334695_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.12	chr18	-	5115	25	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	12.5687001007352	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369427	12322750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346391_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.13	chr18	-	5184	25	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	14.6676136057945	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369427	12322750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12354862_12354970_12356089_12356213_12365244_12365412_12369237
ES.16103.15	chr18	-	5012	24	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	12.7509219800827	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGAGGTCTTTTATT	NA	False	NA	-29	True	AATAAA	-13	NA	12369427	12322752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345323_12346313_12346564_12347387_12347556_12354862_12354970_12356089_12356213_12369237
ES.16103.16	chr18	-	5055	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	13	156	13	-156	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGCTTGAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	12369444	12322905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.18	chr18	-	4568	27	Fusion	ENSMUSG00000024413.15_ENSMUSG00000057766.15	novel	5224	25	NA	NA	3012	-867	multi-exon	FALSE	canonical	0	0	junction_24	15.4423915123695	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGACCTGTTTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	12401742	12323616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12393990_12394090_12395168_12395265_12401506
ES.16103.2	chr18	-	4566	1	Genic_Genomic	ENSMUSG00000024413.15	novel	NA	NA	NA	NA	3269	3256	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCTTCAATCCCAGCA	NA	False	NA	NA	False	NA	NA	NA	12324058	12319492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_12319500_12324100
ES.16103.20	chr18	-	4024	23	NIC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-2	-917	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	13.0549537793827	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGCCCACCACCAACC	NA	False	NA	NA	False	NA	NA	NA	12369417	12323666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.21	chr18	-	4317	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	-10	917	-10	-917	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGCCCACCACCAACC	NA	False	NA	NA	False	NA	NA	NA	12369467	12323666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.22	chr18	-	3075	17	NIC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	697	-917	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	11.7445133466653	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGCCCACCACCAACC	NA	False	NA	NA	False	NA	NA	NA	12344914	12323666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542
ES.16103.23	chr18	-	3250	9	NNC	ENSMUSG00000057766.15	novel	3328	10	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	0.484122918275927	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTTGCCTTTGTTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	12438737	12385422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12387759_12393990_12394090_12395168_12395265_12401506_12401606_12408762_12408862_12412746_12412846_12415359_12415459_12428793_12429047_12438667
ES.16103.3	chr18	-	5225	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	1	-2	1	1	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGTCTTTTATTGCAGA	NA	False	NA	-24	True	AATAAA	-18	NA	12369456	12322747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.6	chr18	-	5161	25	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	12.9268776843701	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	-26	True	AATAAA	-16	NA	12369403	12322749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335359_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ES.16103.7	chr18	-	5338	26	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	14.3913307237378	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	-26	True	AATAAA	-16	NA	12369404	12322749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12365244_12365412_12369237
ES.16103.8	chr18	-	4230	19	NNC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	-878	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.7243185090365	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	-26	True	AATAAA	-16	NA	12346489	12322749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12324060_12324740_12324904_12326358_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345323_12346313
ES.16103.9	chr18	-	4842	23	NIC	ENSMUSG00000024413.15	novel	5224	25	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	13.34390937302	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	False	NA	-27	True	AATAAA	-15	NA	12369367	12322750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12354862_12354970_12356089_12356213_12369237
ES.16104.1	chr18	+	5707	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1384	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12635871	12716070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.10	chr18	+	5280	37	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1131	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.0081931019061	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGCCTTCTAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	12636124	12715930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649650_12652899_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664891_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.11	chr18	+	5460	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-322	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7147992272195	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12636933	12716070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637037_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.12	chr18	+	6783	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-48	1181	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTGTCTACTTGG	NA	False	NA	11	True	GATAAA	-16	NA	12637207	12717251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.13	chr18	+	5542	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-41	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	23.5324248274908	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATTATGATGTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	12637214	12716064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12705003_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.14	chr18	+	5355	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-5	-204	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAAATTGTTATTCAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	12637250	12715866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.15	chr18	+	5362	39	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	5	1172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	23.5060550930772	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCATTGGTGGTCTGGTG	NA	False	NA	2	True	GATAAA	-7	NA	12637260	12717242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574_12715686_12717044
ES.16104.16	chr18	+	5704	37	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	5103	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5584190537888	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCTACAGTTCATTG	NA	False	NA	NA	False	AATACA	-17	NA	12642358	12716020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12642870_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.17	chr18	+	4888	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	18386	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6525267291564	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTACAGTTCATTGGGAT	3588	False	NA	NA	False	AATACA	-21	NA	12655641	12716024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12655834_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.18	chr18	+	4870	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTTTTATAAGCAAGG	4998	False	NA	NA	False	AATAAA	-21	NA	12657051	12716072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.19	chr18	+	6051	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	1183	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTGTCTACTTGGCT	4998	False	NA	13	True	GATAAA	-18	NA	12657051	12717253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.2	chr18	+	5423	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1380	-280	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGCTGTACAGATCT	NA	False	NA	NA	False	NA	NA	NA	12635875	12715790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.20	chr18	+	6232	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19801	1369	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACATTGGTGTTTTTCCT	5003	False	NA	NA	False	AATATA	-20	NA	12657056	12717439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.21	chr18	+	4995	33	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19816	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.423809304396	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGATGTTTTATAAG	5018	False	NA	NA	False	AATAAA	-16	NA	12657071	12716067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12675974_12676125_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.22	chr18	+	2606	19	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19816	-33752	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.0648802611886	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGAAATATTTGATTTC	5018	False	NA	NA	False	AATAAA	-17	NA	12657071	12682318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248
ES.16104.23	chr18	+	4675	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19816	-173	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTAGTTAATATTATTT	5018	False	NA	NA	False	AAGAAA	-33	NA	12657071	12715897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.24	chr18	+	4901	33	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19991	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9806869376081	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGATGTTTTATAAG	5193	False	NA	NA	False	AATAAA	-16	NA	12657246	12716067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657363_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704007_12704054_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.25	chr18	+	4995	31	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	20056	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_10	12.4134335835551	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTTTTATAAGCAAGG	5258	False	NA	NA	False	AATAAA	-21	NA	12657311	12716072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.26	chr18	+	4836	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	20063	11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.3868704004175	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGCAAGGAAAGCAAAG	5265	False	NA	NA	False	AATAAA	-30	NA	12657318	12716081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657402_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.27	chr18	+	4731	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	20072	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6525267291564	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTACAGTTCATTGGGAT	5274	False	NA	NA	False	AATACA	-21	NA	12657327	12716024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657363_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.29	chr18	+	5971	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	20099	1182	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.3868704004175	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTGTCTACTTGGC	5301	False	NA	12	True	GATAAA	-17	NA	12657354	12717252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657402_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.3	chr18	+	5552	37	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1371	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	23.3927154431133	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12635884	12716070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.30	chr18	+	4642	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	20101	-145	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.3868704004175	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTATATGCCTTCTAG	5303	False	NA	NA	False	NA	NA	NA	12657356	12715925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657402_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.31	chr18	+	5249	33	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	20108	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	28.1784907997217	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGATGTTTTATAAG	5310	False	NA	NA	False	AATAAA	-16	NA	12657363	12716067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12689930_12690134_12690727_12690860_12694753_12694908_12700722_12700890_12704096_12704205_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.32	chr18	+	6187	31	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	20230	1368	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_10	12.4134335835551	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACATTGGTGTTTTTCC	5432	False	NA	NA	False	AATATA	-19	NA	12657485	12717438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.33	chr18	+	4239	27	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	24094	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	24.5026263536147	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGATGTTTTATAAG	9296	False	NA	NA	False	AATAAA	-16	NA	12661349	12716067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12689930_12690134_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.34	chr18	+	3988	25	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	24408	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	13.2632925985803	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	9610	False	NA	NA	False	AATAAA	-19	NA	12661663	12716070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.35	chr18	+	4704	22	ISM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	27833	-1182	27833	1182	3prime_fragment	FALSE	canonical	3	53	junction_1	12.7627931460511	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTGTCTACTTGGC	3080	False	NA	12	True	GATAAA	-17	NA	12665088	12717252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.36	chr18	+	3494	22	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	27852	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	21.4397854255347	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATTATGATGTTTTAT	3099	False	NA	NA	False	AATAAA	-13	NA	12665107	12716064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710962_12711066_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.37	chr18	+	4189	22	ISM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	27952	-786	27952	786	3prime_fragment	FALSE	canonical	3	53	junction_1	12.7627931460511	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTGTTACCCGAACCA	3199	False	NA	NA	False	TATAAA	-22	NA	12665207	12716856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.38	chr18	+	4897	20	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	33705	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.2741819135565	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGATGTTTTATAAGC	8952	False	NA	NA	False	AATAAA	-17	NA	12670960	12716068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704096_12704205_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.39	chr18	+	2325	6	ISM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	70014	-1182	70014	1182	3prime_fragment	FALSE	canonical	3	78	junction_1	10.9434912162436	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTGTCTACTTGGC	NA	False	NA	12	True	GATAAA	-17	NA	12707269	12717252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.4	chr18	+	6920	38	NNC	ENSMUSG00000024421.17	novel	5551	38	NA	NA	-1366	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	20.7911806329277	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12635889	12716070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.40	chr18	+	1238	5	ISM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	73306	10	73306	-10	3prime_fragment	FALSE	canonical	3	85	junction_2	9.49670995661129	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCAAATTATGATGTT	NA	False	NA	NA	False	AATAAA	-9	NA	12710561	12716060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.6	chr18	+	7064	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1366	1375	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTTTTCCTGTATGT	NA	False	NA	NA	False	AATATA	-26	NA	12635889	12717445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.8	chr18	+	6868	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1361	1184	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTGTCTACTTGGCTC	NA	False	NA	14	True	GATAAA	-19	NA	12635894	12717254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16104.9	chr18	+	6031	38	ISM	ENSMUSG00000024421.17	ENSMUST00000092070.13	10548	75	169115	-446	-1265	446	3prime_fragment	FALSE	canonical	0	0	junction_15	22.9860058420919	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTCTTCTTCAACC	NA	False	NA	NA	False	AATGAA	-45	NA	12635990	12716516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664891_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ES.16105.1	chr18	+	1981	14	FSM	ENSMUSG00000024424.16	ENSMUST00000169401.8	1950	14	-30	-1	0	1	multi-exon	FALSE	canonical	1	3	junction_1	13.7926315977239	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGACCTTGCAGGAG	NA	False	NA	3	True	AATAAA	-17	NA	12732952	12870108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12733061_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.10	chr18	+	2903	8	NNC	ENSMUSG00000024424.16	novel	483	3	NA	NA	-15071	24	intron_retention	FALSE	canonical	2	2	junction_1	17.8302654872814	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACCTTGTTCAAACT	NA	False	NA	-66	True	AATAAA	-41	NA	12852690	12870039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12852776_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12868049_12869036_12869076_12869730
ES.16105.2	chr18	+	3343	14	FSM	ENSMUSG00000024424.16	ENSMUST00000169401.8	1950	14	-11	-1382	-11	-431	multi-exon	FALSE	canonical	1	3	junction_1	13.7926315977239	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCCTTGCCATGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	12732971	12871489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12733061_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.3	chr18	+	2420	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	153	1812	135	1	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGACCTTGCAGGAG	NA	False	NA	3	True	AATAAA	-17	NA	12776553	12870108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.4	chr18	+	3759	14	NIC	ENSMUSG00000024424.16	novel	4385	14	NA	NA	152	-428	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	13.1886628739371	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGCCATGATTTGGC	NA	False	NA	NA	False	AATAAA	-20	NA	12776570	12871492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828620_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.5	chr18	+	3927	13	NIC	ENSMUSG00000024424.16	novel	4385	14	NA	NA	429	-1	intron_retention	FALSE	canonical	3	6	junction_5	13.6287584011001	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGTGACCTTGCAGG	NA	False	NA	1	True	AATAAA	-15	NA	12776847	12870106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828620_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12868049_12869036_12869076_12869730
ES.16105.6	chr18	+	4455	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	467	-537	449	537	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTTTATGAAGTTAGG	NA	False	NA	NA	False	AATATA	-15	NA	12776867	12872457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.7	chr18	+	1936	14	NNC	ENSMUSG00000024424.16	novel	783	4	NA	NA	-12179	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.4427045935424	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGTGACCTTGCAGG	NA	False	NA	1	True	AATAAA	-15	NA	12810605	12870106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12810671_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.8	chr18	+	1719	11	NNC	ENSMUSG00000024424.16	novel	483	3	NA	NA	5248	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.8354305633507	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGACCTTGCAGGAG	NA	False	NA	3	True	AATAAA	-17	NA	12828032	12870108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12828172_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16105.9	chr18	+	1680	11	NNC	ENSMUSG00000024424.16	novel	483	3	NA	NA	5259	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	18.5245782678041	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGACCTTGCAGGAG	NA	False	NA	3	True	AATAAA	-17	NA	12828043	12870108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_12828172_12828292_12828620_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ES.16106.1	chr18	+	4762	4	ISM	ENSMUSG00000024430.15	ENSMUST00000150758.8	1642	6	-1	-4	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGCTGTTTTAGTAA	7805	False	NA	NA	False	AATAAA	-19	NA	12874410	12888203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_12874459_12877548_12877722_12877812_12877867_12883716
ES.16107.1	chr18	-	4157	2	Antisense	novelGene_ENSMUSG00000024430.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAATGTGACATACTCT	6562	False	NA	NA	False	ATTAAA	-39	NA	12882527	12878168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_12878321_12878522
ES.16108.1	chr18	-	5314	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	55	-1413	3	1413	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATGGTGGTGGTTGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	13074843	12886957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.12	chr18	-	3621	15	FSM	ENSMUSG00000044252.19	ENSMUST00000121888.8	2674	15	-947	0	10	0	multi-exon	FALSE	canonical	3	46	junction_1	113.316357772281	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996427	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ES.16108.13	chr18	-	2576	13	NIC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	19	0	intron_retention	TRUE	canonical	3	22	junction_12	99.8294030945904	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996418	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
ES.16108.14	chr18	-	3758	27	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_12	131.283513613651	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074877	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.15	chr18	-	3968	28	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_16	129.844266749371	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074918	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031253_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.16	chr18	-	3698	26	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	13	0	intron_retention	FALSE	canonical	1	2	junction_21	132.169914882321	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074885	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.17	chr18	-	3103	15	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_14	151.474470806544	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12955230_12955350_12974240_12974404_12995905
ES.16108.18	chr18	-	3856	28	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-9362	0	intron_retention	FALSE	canonical	0	0	junction_27	130.27439649196	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13084260	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13084136
ES.16108.19	chr18	-	2392	15	NNC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_14	117.149912679508	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
ES.16108.2	chr18	-	4298	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	144	-1412	-106	1412	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGGTGGTGGTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	12995586	12886958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ES.16108.21	chr18	-	3726	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	-710	14	-3	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ES.16108.22	chr18	-	2689	14	FSM	ENSMUSG00000044252.19	ENSMUST00000117361.8	2687	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_13	98.4808875218973	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996439	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996199
ES.16108.23	chr18	-	2790	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	28	0	28	0	multi-exon	FALSE	canonical	3	45	junction_13	91.3749671156418	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996469	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ES.16108.24	chr18	-	2425	14	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	145.411963239805	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996353	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12974240_12974404_12996128
ES.16108.25	chr18	-	2513	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	28	0	intron_retention	FALSE	canonical	3	33	junction_13	94.3034884243106	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996469	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
ES.16108.26	chr18	-	2589	14	NNC	ENSMUSG00000044252.19	novel	2494	14	NA	NA	2629	0	intron_retention	FALSE	canonical	0	0	junction_13	102.439937663015	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12999535	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12999395
ES.16108.27	chr18	-	3670	26	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_13	131.066700576462	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074815	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.28	chr18	-	2321	13	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	8	junction_12	103.510969628022	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996440	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996405
ES.16108.30	chr18	-	4080	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_24	134.316879932099	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074891	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13055160_13055306_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.31	chr18	-	2554	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234118.2	2494	14	-60	0	-60	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12987576	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12987471
ES.16108.34	chr18	-	3255	7	ISM	ENSMUSG00000044252.19	ENSMUST00000234428.2	2317	13	54391	-3	1930	0	3prime_fragment	FALSE	canonical	3	330	junction_6	31.7354516099722	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12898264	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538
ES.16108.35	chr18	-	2460	13	NIC	ENSMUSG00000044252.19	novel	2687	14	NA	NA	-25	0	intron_retention	FALSE	canonical	2	4	junction_12	104.565337097062	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996373	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996199
ES.16108.36	chr18	-	8691	27	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	318	0	intron_retention	FALSE	canonical	0	0	junction_12	136.506393850728	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074516	12888384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13069394
ES.16108.37	chr18	-	2970	17	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_15	126.292072197743	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074907	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13066636_13066760_13074688
ES.16108.38	chr18	-	2314	12	NNC	ENSMUSG00000044252.19	novel	2522	12	NA	NA	17381	0	intron_retention	FALSE	canonical	2	25	junction_11	103.443760422018	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	6559	False	NA	-32	True	AATAAA	-15	NA	12935274	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12935079
ES.16108.39	chr18	-	3853	30	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_29	134.70136079226	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074821	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13071059_13071150_13074688
ES.16108.4	chr18	-	3886	29	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-11	11	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	126.821317938561	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTGTAACCTAGTACT	NA	False	NA	3	True	AATAAA	-29	NA	13074909	12888359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.40	chr18	-	4055	30	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_27	137.114826420256	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074894	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13069394_13069432_13071059_13071150_13074688
ES.16108.41	chr18	-	2496	14	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_13	123.239892104453	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12996440	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996128
ES.16108.42	chr18	-	5119	3	NIC	ENSMUSG00000044252.19	novel	2522	12	NA	NA	4873	0	intron_retention	FALSE	canonical	3	348	junction_1	25.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12895321	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12891948_12892455
ES.16108.43	chr18	-	4026	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_13	133.412720838879	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074899	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12976220_12976314_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.46	chr18	-	3920	28	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_20	135.16937502678	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074877	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039942_13040007_13042914_13043060_13044133_13044227_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.5	chr18	-	3997	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	-32	-9	-32	9	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATTGTAACCTAGTA	NA	False	NA	1	True	AATAAA	-27	NA	13074930	12888361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.50	chr18	-	3853	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	8160	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_27	135.474915781935	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13066674	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13062348_13062657_13066636
ES.16108.51	chr18	-	2598	13	NNC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	157.244678411986	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12995738	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896052_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12995163
ES.16108.52	chr18	-	2634	16	NNC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	157.137080990523	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12996371	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12955234_12955350_12974240_12974404_12996199
ES.16108.53	chr18	-	2219	14	NNC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	125.821607536531	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	12996440	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12996405
ES.16108.54	chr18	-	3827	27	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_8	128.021684784836	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074891	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.55	chr18	-	2955	17	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_16	126.986957991756	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAGTGTGAATGC	NA	False	NA	-32	True	AATAAA	-15	NA	13074892	12888394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13074688
ES.16108.57	chr18	-	6005	6	ISM	ENSMUSG00000044252.19	ENSMUST00000234428.2	2317	13	52112	9	-349	-2	intron_retention	FALSE	canonical	3	348	junction_1	24.2569577647322	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAAAGTGTGAAT	NA	False	NA	-34	True	AATAAA	-13	NA	12900543	12888396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965
ES.16108.58	chr18	-	2657	14	NNC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-25	-2	intron_retention	FALSE	canonical	0	0	junction_10	127.0267175922	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAAAGTGTGAAT	NA	False	NA	-34	True	AATAAA	-13	NA	12996373	12888396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904466_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ES.16108.59	chr18	-	3789	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	129.282769303475	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAAAGTGTGAAT	NA	False	NA	-34	True	AATAAA	-13	NA	13074843	12888396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12888650_12888735_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.6	chr18	-	3869	27	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-32	4	intron_retention	FALSE	canonical	1	2	junction_15	130.376724290367	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTTGATATTGTAACC	NA	False	NA	-4	True	AATAAA	-43	NA	13074930	12888366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.60	chr18	-	2483	14	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	3	43	junction_13	119.481176255048	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAAAAGTGTGAAT	NA	False	NA	-34	True	AATAAA	-13	NA	12995464	12888396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ES.16108.61	chr18	-	5894	16	NNC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	2794	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	130.45380621337	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATCAAATAAAAAAGTGT	NA	False	NA	-38	True	AATAAA	-9	NA	13010240	12888400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13006794
ES.16108.62	chr18	-	2451	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	104	475	104	403	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGGGAAATTAATCCT	NA	False	NA	NA	False	ACTAAA	-14	NA	12995626	12888845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ES.16108.63	chr18	-	3456	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	7	493	7	385	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGGTAAGATGGCCT	NA	False	NA	NA	False	NA	NA	NA	13074891	12888863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.64	chr18	-	3179	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	-28	805	-28	73	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGCGTTTCACCCAA	NA	False	NA	38	True	TTTAAA	-27	NA	13074926	12889175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.65	chr18	-	3067	28	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-7	35	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	129.949731760541	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTAAATGTTTTTC	NA	False	NA	0	True	NA	NA	NA	13074870	12889213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900025_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.68	chr18	-	2143	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	27	860	27	18	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTCTTAAGCTTAAG	NA	False	NA	7	True	ATTAAA	-31	NA	12995703	12889230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ES.16108.69	chr18	-	2716	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	-669	846	-2	18	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTCTTAAGCTTAAG	NA	False	NA	7	True	ATTAAA	-31	NA	12996439	12889230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ES.16108.70	chr18	-	4844	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	133.984136092635	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTCTTAAGCTTAAG	NA	False	NA	7	True	ATTAAA	-31	NA	13074863	12889230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13069366_13071150_13074688
ES.16108.71	chr18	-	1930	15	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	6	18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	112.999006677953	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTCTTAAGCTTAAG	NA	False	NA	7	True	ATTAAA	-31	NA	13074892	12889230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13066636_13066760_13074688
ES.16108.73	chr18	-	4717	28	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	144.346272431551	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGTTTGCTAATCTAAA	NA	False	NA	-10	True	ATTAAA	-14	NA	13074877	12889247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043055_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066814_13069376_13071150_13074688
ES.16108.74	chr18	-	1724	13	NIC	ENSMUSG00000044252.19	novel	2818	14	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	131.140827611643	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGTTTGCTAATCTAAA	NA	False	NA	-10	True	ATTAAA	-14	NA	12996364	12889247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ES.16108.75	chr18	-	2909	27	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	130.376724290367	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGTTTGCTAATCTAAA	NA	False	NA	-10	True	ATTAAA	-14	NA	13074851	12889247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.77	chr18	-	1750	14	FSM	ENSMUSG00000044252.19	ENSMUST00000117361.8	2687	14	73	864	-16	0	multi-exon	FALSE	canonical	3	16	junction_13	98.4808875218973	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12996364	12889248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996199
ES.16108.78	chr18	-	3153	29	NNC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	133.721015360263	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	13074889	12889248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13026693_13026778_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.79	chr18	-	1613	14	NNC	ENSMUSG00000044252.19	novel	1947	15	NA	NA	2614	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	100.952387863708	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12999550	12889248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12999522
ES.16108.8	chr18	-	2706	15	NIC	ENSMUSG00000044252.19	novel	2674	15	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	3	45	junction_14	115.127701944849	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	False	NA	-8	True	AATAAA	-39	NA	12996463	12888370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ES.16108.80	chr18	-	1620	14	NNC	ENSMUSG00000044252.19	novel	1947	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_13	94.3034884243106	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12996440	12889248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
ES.16108.82	chr18	-	6143	1	NIC	ENSMUSG00000044252.19	novel	3030	14	NA	NA	-224	-42690	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAGACAACATT	2576	False	NA	NA	False	NA	NA	NA	12953188	12947045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_12947000_12953200
ES.16108.83	chr18	-	7463	2	Genic_Genomic	ENSMUSG00000044252.19	novel	3030	14	NA	NA	19	14491	multi-exon	TRUE	non_canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTGGCTGTGTGATC	NA	False	NA	NA	False	NA	NA	NA	12996478	12988783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_12988857_12989088
ES.16108.84	chr18	-	4121	13	ISM	ENSMUSG00000044252.19	ENSMUST00000132594.8	2353	15	27	19105	-8	8794	5prime_fragment	FALSE	canonical	3	97	junction_2	11.4706751714487	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTTTGGTTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	13074871	13022379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.85	chr18	-	4147	13	NNC	ENSMUSG00000044252.19	novel	2353	15	NA	NA	6	8793	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.7338438696544	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCTTTGGTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	13074892	13022380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_13025347_13031253_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.86	chr18	-	7343	2	NNC	ENSMUSG00000044252.19	novel	681	4	NA	NA	8829	2554	intron_retention	TRUE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGAGTGCACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13066005	13058527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_13058974_13059108
ES.16108.87	chr18	-	3168	5	NNC	ENSMUSG00000044252.19	novel	681	4	NA	NA	-19	2554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.926245852129	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGAGTGCACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13074917	13058527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_13058974_13059108_13061393_13062064_13062151_13066636_13066760_13074688
ES.16108.88	chr18	-	3448	6	NNC	ENSMUSG00000044252.19	novel	681	4	NA	NA	9	2554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.6228624343779	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGAGTGCACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13074889	13058527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_13058974_13059108_13061393_13062064_13062151_13062348_13062657_13066636_13066760_13074688
ES.16108.89	chr18	-	175	1	Intergenic	novelGene_13433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATGAGAGAGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	13072232	13072057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_13072100_13072200
ES.16108.9	chr18	-	3577	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	-670	-14	-3	0	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	False	NA	-8	True	AATAAA	-39	NA	12996440	12888370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ES.16109.1	chr18	+	3513	11	NIC	ENSMUSG00000024423.7	novel	591	6	NA	NA	-52	10	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	247.681266954124	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGCATTCTGTCTTC	NA	False	NA	26	True	NA	NA	NA	13088856	13126017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13089047_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.10	chr18	+	527	6	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	327	8639	-22	-1	5prime_fragment	FALSE	canonical	3	811	junction_4	14.6232691283447	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATCCAGTTAAAACAT	NA	False	NA	NA	False	NA	NA	NA	13105306	13117368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295
ES.16109.11	chr18	+	4049	10	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	327	0	-22	0	intron_retention	FALSE	canonical	3	761	junction_9	33.3199973322661	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105306	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801
ES.16109.12	chr18	+	5408	9	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	327	0	-22	0	intron_retention	FALSE	canonical	3	768	junction_6	30.6326521052292	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105306	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351
ES.16109.13	chr18	+	3428	11	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	247.04485422692	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13105306	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117301_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.14	chr18	+	3422	11	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	249.243354976617	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	13	True	NA	NA	NA	13105308	13126004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118284_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.15	chr18	+	3436	11	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	247.04485422692	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13105308	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115239_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.16	chr18	+	1219	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	329	2215	-20	-327	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTGTTTCACATT	NA	False	NA	NA	False	NA	NA	NA	13105308	13123792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.17	chr18	+	3529	12	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	317.20121621811	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105309	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13110628_13110725_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.18	chr18	+	3414	11	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.614050694603	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13105319	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105430_13107769_13107899_13109035_13109082_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.2	chr18	+	3566	12	NNC	ENSMUSG00000024423.7	novel	591	6	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	316.367476465722	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13088898	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13089047_13092550_13092660_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.21	chr18	+	3366	12	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	237.785409195868	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13105328	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549_13124923_13124966
ES.16109.22	chr18	+	4010	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	1	-762	intron_retention	FALSE	canonical	3	768	junction_6	37.7038492320556	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGGATTAGAATTTCTT	NA	False	NA	NA	False	CATAAA	-14	NA	13105329	13125245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.23	chr18	+	4684	9	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	3	junction_4	273.270899246517	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13105329	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.25	chr18	+	3314	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	257.986218408831	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13105340	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.26	chr18	+	2612	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	366	785	17	-785	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCATAAAATATTTTCCT	NA	False	NA	NA	False	ATTAAA	-30	NA	13105345	13125222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.27	chr18	+	1808	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	376	1579	27	309	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGGTCAACTCACTT	NA	False	NA	NA	False	NA	NA	NA	13105355	13124428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.28	chr18	+	3300	10	NNC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	59	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	336.614334033094	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATGGCTACATTGCATT	NA	False	NA	18	True	NA	NA	NA	13105387	13126009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13105426_13107769_13107899_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.29	chr18	+	4298	11	NNC	ENSMUSG00000024423.7	novel	687	8	NA	NA	-782	-3	intron_retention	FALSE	canonical	0	0	junction_1	247.681266954124	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	13	True	NA	NA	NA	13106572	13126004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13107161_13107369_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.3	chr18	+	3546	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	221	-4	-128	4	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGCTACATTGCATTCT	NA	False	NA	20	True	NA	NA	NA	13105200	13126011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.30	chr18	+	3948	11	NNC	ENSMUSG00000024423.7	novel	687	8	NA	NA	-458	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	247.681266954124	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13106896	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13107048_13107281_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.31	chr18	+	5300	10	NNC	ENSMUSG00000024423.7	novel	687	8	NA	NA	-446	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	260.897501277493	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13106908	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13107048_13107276_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.32	chr18	+	3501	12	NNC	ENSMUSG00000024423.7	novel	591	6	NA	NA	-234	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	311.443692428855	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107120	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_13107146_13107369_13107533_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.33	chr18	+	4789	10	NIC	ENSMUSG00000024423.7	novel	591	6	NA	NA	61	0	intron_retention	FALSE	canonical	2	27	junction_1	252.503807574274	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107415	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13107533_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.34	chr18	+	3477	11	NIC	ENSMUSG00000024423.7	novel	687	8	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	238.212195321734	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107428	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13107593_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.35	chr18	+	3373	10	NIC	ENSMUSG00000024423.7	novel	687	8	NA	NA	-90	-2	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	332.468879078261	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13107444	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13107593_13107769_13107899_13109035_13109089_13109525_13109589_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.36	chr18	+	5595	8	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	119	-4	intron_retention	FALSE	canonical	3	768	junction_5	39.3798871278738	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTTATGGCTACAT	NA	False	NA	12	True	NA	NA	NA	13107849	13126003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13119455_13121351_13122937_13123549
ES.16109.37	chr18	+	5580	6	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-5365	-2	intron_retention	FALSE	canonical	3	768	junction_2	46.8930698504587	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13113991	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.38	chr18	+	7429	3	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-3529	0	intron_retention	FALSE	canonical	3	768	junction_1	8	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13115827	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13117422_13118275_13119455_13121351
ES.16109.39	chr18	+	3893	6	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	11403	2	-2974	-2	3prime_fragment	FALSE	canonical	3	761	junction_4	47.7451568224464	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13116382	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.40	chr18	+	4990	5	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-2713	-3	intron_retention	FALSE	canonical	3	768	junction_1	49.4418850773309	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTTATGGCTACATT	NA	False	NA	13	True	NA	NA	NA	13116643	13126004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.5	chr18	+	4817	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-44	0	intron_retention	FALSE	canonical	3	768	junction_6	37.7038492320556	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105284	13126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
ES.16109.7	chr18	+	2063	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	313	1387	-36	501	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAACCTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	13105292	13124620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.16109.9	chr18	+	4580	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	761	junction_8	41.7251441497928	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	False	NA	14	True	NA	NA	NA	13105297	13126005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_13105430_13107769_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ES.1611.1	chr1	+	1571	7	NNC	ENSMUSG00000042708.13	novel	2375	8	NA	NA	-39	-1063	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.25830573921179	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTTTTGGTTTTG	103	False	NA	NA	False	NA	NA	NA	153300868	153314620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_153301333_153304305_153304456_153308920_153309136_153311508_153311596_153311663_153311883_153313270_153313377_153314290
ES.16110.1	chr18	-	7193	2	Antisense	novelGene_ENSMUSG00000024423.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCACAGAACTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13131928	13124563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_13127467_13127638
ES.16111.1	chr18	+	7434	2	Antisense	novelGene_ENSMUSG00000117608.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGAGGTGGTTATTATC	NA	False	NA	NA	False	NA	NA	NA	13651102	13661638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_13651278_13654379
ES.16112.2	chr18	-	5958	9	NIC	ENSMUSG00000024420.10	novel	6206	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.1224989991992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGTCAAATTTGAATA	NA	False	NA	NA	False	AATAAA	-15	NA	14105740	13820069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_13820272_13820415_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104462_14105557
ES.16112.3	chr18	-	6074	8	FSM	ENSMUSG00000024420.10	ENSMUST00000025288.9	6206	8	129	3	-10	0	multi-exon	FALSE	canonical	0	0	junction_3	3.11022015101103	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTGTCAAATTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	14105715	13820072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104462_14105557
ES.16112.4	chr18	-	4822	7	NIC	ENSMUSG00000024420.10	novel	6206	8	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.18416219575713	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTATTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	14105701	13821269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14105557
ES.16112.5	chr18	-	5034	8	FSM	ENSMUSG00000024420.10	ENSMUST00000025288.9	6206	8	-31	1203	-31	0	multi-exon	FALSE	canonical	0	0	junction_3	3.11022015101103	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGAGTGTATTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	14105875	13821272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104462_14105557
ES.16112.7	chr18	-	4671	7	NNC	ENSMUSG00000024420.10	novel	691	3	NA	NA	254	-19736	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.48409082672781	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCTCATATTCGCA	NA	False	NA	NA	False	AATAAA	-20	NA	14104523	13841008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_13841711_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420
ES.16112.8	chr18	-	179	1	Intergenic	novelGene_13434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	14082939	14082760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_14082800_14082900
ES.16113.1	chr18	+	1267	1	Intergenic	novelGene_13435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCTAGACTTGCCCAC	NA	False	NA	NA	False	NA	NA	NA	14754872	14756139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_14754900_14756100
ES.16114.1	chr18	+	6662	2	Antisense	novelGene_ENSMUSG00000037013.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGATCTTGAGATGTGG	NA	False	NA	NA	False	NA	NA	NA	14804524	14811402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_14809063_14809278
ES.16114.2	chr18	+	3545	1	Intergenic	novelGene_13437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGATCTTGAGATGTGG	NA	False	NA	NA	False	NA	NA	NA	14807857	14811402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_14807900_14811400
ES.16115.1	chr18	-	2918	12	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	5	24467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	347.523992869319	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGAAAATACTTGGATG	NA	False	NA	NA	False	NA	NA	NA	14815830	14732787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14732827_14750831_14750853_14758685_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.10	chr18	-	6503	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	797	junction_3	71.3791592483408	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGTTTCTTTAAATTA	NA	False	NA	-14	True	AATAAA	-22	NA	14815832	14758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.11	chr18	-	3478	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	-382	2	-382	-2	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTGTTTCTTTAAATT	NA	False	NA	-15	True	AATAAA	-21	NA	14816353	14758681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.12	chr18	-	2987	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	-91	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTTGTTTCTTTAAA	NA	False	NA	-17	True	AATAAA	-19	NA	14816062	14758683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.13	chr18	-	5716	10	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_3	234.451026763837	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815823	14758685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.14	chr18	-	3063	11	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	352.815546709609	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815876	14758685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14811210_14811370_14812443_14812521_14815723
ES.16115.15	chr18	-	7081	8	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	805	junction_3	65.8021152193981	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815823	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.16	chr18	-	2750	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	298.192235604819	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815801	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14815723
ES.16115.17	chr18	-	2837	10	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	346.778650004243	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815823	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.18	chr18	-	6975	8	ISM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	23439	8	-8352	0	3prime_fragment	FALSE	canonical	3	178	junction_3	310.391786657588	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14792532	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083
ES.16115.19	chr18	-	3347	13	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	413.47191057354	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815822	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14797400_14797593_14803365_14803451_14812443_14812521_14813491_14813706_14815723
ES.16115.2	chr18	-	2936	11	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	19	24467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	280.080417023397	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGAAAATACTTGGATG	NA	False	NA	NA	False	NA	NA	NA	14815866	14732787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14732830_14758685_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.20	chr18	-	3293	13	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	412.321367045442	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815823	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14797400_14797593_14803365_14803451_14811210_14811370_14812443_14812521_14815723
ES.16115.22	chr18	-	3013	12	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	398.079812587982	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815822	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14779838_14779911_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.23	chr18	-	2972	11	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	391.818121071499	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815823	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760363_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14810855_14810985_14812443_14812521_14815723
ES.16115.24	chr18	-	2874	10	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	288.575599355195	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815855	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803444_14812443_14812521_14815723
ES.16115.25	chr18	-	2719	10	FSM	ENSMUSG00000037013.18	ENSMUST00000040964.13	4153	10	1	1433	0	0	multi-exon	FALSE	canonical	3	40	junction_6	374.482193942845	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815822	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.26	chr18	-	2497	8	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	325.222498405919	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815847	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14803365_14803451_14812443_14812521_14815723
ES.16115.27	chr18	-	3109	12	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	387.149126669545	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815831	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14811210_14811370_14812443_14812521_14815723
ES.16115.28	chr18	-	2940	11	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	330.136774685887	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815815	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770548_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.29	chr18	-	2634	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	-7	-24	5	0	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815830	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.3	chr18	-	4965	12	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	388.843846794678	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCTTTGATTTTTTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	14815823	14756856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14797400_14797593_14803365_14803451_14812443_14812521_14815723
ES.16115.30	chr18	-	3600	10	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_5	343.761365693136	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815806	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14770542_14773313_14773419_14774012_14774083_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.33	chr18	-	2953	11	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	362.921327562876	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815855	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14779838_14779911_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.34	chr18	-	2833	10	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	371.580641098949	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815823	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784303_14788083_14788238_14803365_14803451_14812460_14812521_14815723
ES.16115.35	chr18	-	2620	9	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	425.516157155049	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815828	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.36	chr18	-	2874	10	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	362.570691276666	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815832	14758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14815723
ES.16115.37	chr18	-	3721	10	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	197	junction_3	228.73759832806	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815830	14758688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.39	chr18	-	2762	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	294.447761708253	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815822	14758688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14812443_14812521_14815723
ES.16115.4	chr18	-	4375	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	148	-1425	0	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGACCCTCCTATTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	14815823	14757254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.40	chr18	-	2762	10	NNC	ENSMUSG00000037013.18	novel	4153	10	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	412.799685376471	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14815800	14758688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14811210_14811370_14812443_14812521_14815723
ES.16115.41	chr18	-	3054	10	NNC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	-387	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	289.52451441017	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTCATTTGTTTCT	NA	False	NA	-22	True	AATAAA	-14	NA	14816358	14758688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14816052
ES.16115.42	chr18	-	1902	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	69	940	-3	366	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGTTTTCAAACGCAA	NA	False	NA	NA	False	ATTAAA	-24	NA	14815816	14759627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.43	chr18	-	5375	2	ISM	ENSMUSG00000037013.18	ENSMUST00000235011.2	2086	4	12646	1243	-1071	65	3prime_fragment	FALSE	canonical	3	979	junction_1	0	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTATTATGTTTATT	NA	False	NA	1	True	NA	NA	NA	14771534	14759928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_14760369_14766599
ES.16115.44	chr18	-	1638	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	28	1245	-22	61	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTGTCTATTATGTT	NA	False	NA	-3	True	NA	NA	NA	14815857	14759932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.45	chr18	-	1696	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	149	1253	0	61	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTGTCTATTATGTT	NA	False	NA	-3	True	NA	NA	NA	14815822	14759932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.46	chr18	-	5239	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	59	intron_retention	FALSE	canonical	3	797	junction_3	71.3791592483408	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTTGTCTATTATG	NA	False	NA	-5	True	NA	NA	NA	14815822	14759934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.47	chr18	-	1450	10	NNC	ENSMUSG00000037013.18	novel	4153	10	NA	NA	0	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	380.453562974835	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTTGTCTATTAT	NA	False	NA	-6	True	NA	NA	NA	14815822	14759935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14779838_14779911_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.48	chr18	-	2466	10	NIC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	0	58	intron_retention	FALSE	canonical	3	197	junction_3	228.73759832806	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTTGTCTATTAT	NA	False	NA	-6	True	NA	NA	NA	14815822	14759935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_14760369_14766599_14766734_14769552_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.49	chr18	-	1363	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	2	1238	0	44	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTTTACAGCAGCAAT	NA	False	NA	-20	True	NA	NA	NA	14815821	14759949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.5	chr18	-	4291	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	53	-1433	3	0	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGACCCTCCTATTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	14815832	14757254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.50	chr18	-	2764	1	Intergenic	novelGene_13436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	635	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATACCGTTTAGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	14765097	14762333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_14762300_14765100
ES.16115.51	chr18	-	3568	7	FSM	ENSMUSG00000037013.18	ENSMUST00000234997.2	2196	7	-2	-1370	0	-1018	multi-exon	FALSE	canonical	3	797	junction_1	71.6792624590032	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCATTTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	14815823	14770656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.52	chr18	-	7260	2	ISM	ENSMUSG00000037013.18	ENSMUST00000234997.2	2196	7	23995	8758	-7646	-7111	internal_fragment	FALSE	canonical	3	807	junction_1	0	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTTAAAATACACCACAG	NA	False	NA	NA	False	NA	NA	NA	14791826	14780784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_14784302_14788083
ES.16115.53	chr18	-	3909	5	ISM	ENSMUSG00000037013.18	ENSMUST00000234997.2	2196	7	17	8763	9	-7116	5prime_fragment	FALSE	canonical	3	807	junction_1	60.391948966729	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTTGTTAAAATACAC	NA	False	NA	NA	False	NA	NA	NA	14815804	14780789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.6	chr18	-	3305	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	149	-356	0	356	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTGTCTTATTCTC	NA	False	NA	NA	False	AAGAAA	-21	NA	14815822	14758323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.7	chr18	-	3212	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	62	-363	0	355	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGTTGTCTTATTCT	NA	False	NA	NA	False	AAGAAA	-20	NA	14815823	14758324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.8	chr18	-	3451	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	-499	-41	-413	33	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTTGTCTGGAGAC	NA	False	NA	20	True	TTTAAA	-18	NA	14816384	14758646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ES.16115.9	chr18	-	3105	11	NNC	ENSMUSG00000037013.18	novel	3098	11	NA	NA	-9	13	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	353.594244862667	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGATCTCTTTGACTC	NA	False	NA	0	True	AATAAA	-36	NA	14815844	14758666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14813491_14813706_14815723
ES.16116.1	chr18	-	405	1	Intergenic	novelGene_13438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATGAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	14835864	14835459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_14835500_14835900
ES.16116.2	chr18	-	178	1	Intergenic	novelGene_13439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	14835866	14835688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_14835700_14835900
ES.16117.1	chr18	+	1702	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	-12	2	-12	-2	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATAGAGTGTCTCCTTC	NA	False	NA	8	True	NA	NA	NA	14839195	14895353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ES.16117.10	chr18	+	715	5	ISM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	43	4816	1	-2	5prime_fragment	FALSE	canonical	3	86	junction_2	5.7227615711298	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTAGGTTGTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	14839250	14890539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338
ES.16117.11	chr18	+	1726	8	NNC	ENSMUSG00000036743.5	novel	1214	8	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.9075893577092	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTCTCCTTCAAAG	NA	False	NA	12	True	NA	NA	NA	14839278	14895357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14888908_14889012_14890338_14890459_14890678_14890742_14894403
ES.16117.12	chr18	+	100	1	Intergenic	novelGene_13440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTATTACACTTA	NA	False	NA	NA	False	NA	NA	NA	14865080	14865180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_14865100_14865200
ES.16117.13	chr18	+	2571	1	NIC	ENSMUSG00000036743.5	novel	1918	7	NA	NA	33184	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTCTCCTTCAAAG	NA	False	NA	12	True	NA	NA	NA	14892786	14895357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_14892800_14895400
ES.16117.14	chr18	+	6382	1	Intergenic	novelGene_13441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCATTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	14897676	14904058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_14897700_14904100
ES.16117.15	chr18	+	4507	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-85	712	-85	-712	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTTTGCAGCAGTTTC	NA	False	NA	18	True	ATTAAA	-24	NA	14916216	15032704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.16	chr18	+	6951	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-75	-1742	-75	1742	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGCTCATGGT	NA	False	NA	NA	False	NA	NA	NA	14916226	15035158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.17	chr18	+	4371	14	NIC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	-74	-714	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.1548969959414	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTTGCAGCAGTT	NA	False	NA	16	True	ATTAAA	-22	NA	14916227	15032702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.18	chr18	+	3740	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-68	1462	-68	-1462	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	14916233	15031954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.19	chr18	+	4983	19	Fusion	ENSMUSG00000117450.2_ENSMUSG00000054321.8	novel	5134	15	NA	NA	-53	-57683	multi-exon	FALSE	canonical	0	0	junction_14	46.1577073804287	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTGTAATTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	14916248	15123361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15104682_15104751_15113337_15113505_15119382_15120425_15121971_15122054_15122528
ES.16117.2	chr18	+	4276	18	Fusion	ENSMUSG00000054321.8_ENSMUSG00000036743.5	novel	1214	8	NA	NA	10	-715	multi-exon	FALSE	canonical	1	2	junction_4	24.6575156815275	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTCTTTGCAGCAGT	NA	False	NA	15	True	ATTAAA	-21	NA	14839217	15032701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.20	chr18	+	5180	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	-41	-5	-41	5	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTGTCAGTGGTGG	NA	False	NA	NA	False	AATACA	-16	NA	14916260	15033421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.22	chr18	+	4339	14	NIC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	0	-738	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.5464430058111	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAACAAAACTTTGC	NA	False	NA	-8	True	AATACA	-14	NA	14916301	15032678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14992228_14992334_15031020
ES.16117.23	chr18	+	3291	2	ISM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	0	100846	0	-100846	intron_retention	FALSE	canonical	3	104	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	14916301	14932570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_14916992_14929969
ES.16117.24	chr18	+	4258	16	NNC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	0	-738	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.6674999869796	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAACAAAACTTTGC	NA	False	NA	-8	True	AATACA	-14	NA	14916301	15032678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946428_14946565_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.25	chr18	+	4739	17	Fusion	ENSMUSG00000117450.2_ENSMUSG00000054321.8	novel	5134	15	NA	NA	0	-57683	multi-exon	FALSE	canonical	0	0	junction_13	47.6569774534643	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTGTAATTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	14916301	15123361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15113337_15113505_15119382_15120425_15121971_15122054_15122528
ES.16117.26	chr18	+	1269	3	ISM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	2	100846	2	-100846	5prime_fragment	FALSE	canonical	3	102	junction_2	1	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	14916303	14932570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_14916992_14929969_14930116_14932135
ES.16117.27	chr18	+	2890	15	NNC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	164	42439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	27.4991651079202	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGACTTCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	14916465	15075855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15075539
ES.16117.30	chr18	+	8616	1	NIC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	7659	-100840	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	14923960	14932576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_14924000_14932600
ES.16117.31	chr18	+	2102	5	ISM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	52546	714	52546	-714	3prime_fragment	FALSE	canonical	3	88	junction_3	8.87411967464942	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTTGCAGCAGTT	NA	False	NA	16	True	ATTAAA	-22	NA	14968847	15032702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16117.32	chr18	+	2762	5	Intergenic	novelGene_13442	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGTGTGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	15071257	15093480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_15072683_15075539_15076211_15077321_15077593_15092722_15092869_15093231
ES.16117.4	chr18	+	2089	8	NNC	ENSMUSG00000036743.5	novel	1918	7	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.9634214367404	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTATAGAGTGTCTCCTT	NA	False	NA	7	True	NA	NA	NA	14839221	14895352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_14839665_14854223_14854351_14859560_14859686_14864035_14864159_14888134_14888274_14890338_14890459_14890678_14890742_14894403
ES.16117.5	chr18	+	1542	6	NIC	ENSMUSG00000036743.5	novel	1692	7	NA	NA	18	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	33.7792835921664	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTATAGAGTGTCTCC	NA	False	NA	5	True	NA	NA	NA	14839225	14895350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_14839390_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ES.16117.6	chr18	+	4366	7	NNC	ENSMUSG00000036743.5	novel	1692	7	NA	NA	-13	2720	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.747309406453	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGCATTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	14839232	14898078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_14839390_14859560_14859686_14864035_14864159_14888908_14889012_14890338_14890459_14890678_14890742_14894403
ES.16117.7	chr18	+	3244	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	29	-1581	-9	1578	multi-exon	FALSE	canonical	3	86	junction_2	7.18795288428261	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGTCTCTACCTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	14839236	14896936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ES.16117.8	chr18	+	2155	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	30	-493	-8	490	multi-exon	FALSE	canonical	3	86	junction_2	7.18795288428261	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGGAAATGA	NA	False	NA	NA	False	AATAAA	-23	NA	14839237	14895848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ES.16117.9	chr18	+	4426	20	Fusion	ENSMUSG00000054321.8_ENSMUSG00000036743.5	novel	1214	8	NA	NA	-4	-724	multi-exon	FALSE	canonical	1	1	junction_6	23.6153384588558	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCAGTCACTGTCTT	NA	False	NA	6	True	ATTAAA	-12	NA	14839241	15032692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ES.16118.1	chr18	-	6570	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	44	-3837	44	3122	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGGCTAAACCACTGAT	NA	False	NA	NA	False	TATAAA	-22	NA	15196631	15098619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
ES.16118.2	chr18	-	3453	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	38	-714	38	-1	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTCTCTCTTGTGTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	15196637	15101742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
ES.16118.3	chr18	-	2772	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	3	2	3	-2	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACACCTGTATTCATA	NA	False	NA	-5	True	AATAAA	-20	NA	15196672	15102458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
ES.16118.4	chr18	-	2424	4	NIC	ENSMUSG00000036225.16	novel	2777	5	NA	NA	43	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.09901951359278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATCACACCTGTATTCA	NA	False	NA	-7	True	AATAAA	-18	NA	15196632	15102460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_15102753_15119392_15119538_15140752_15140932_15194824
ES.16118.5	chr18	-	2632	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	37	108	37	33	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACACAACCAATAACAAT	NA	False	NA	NA	False	AAAAAG	-5	NA	15196638	15102564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
ES.16118.6	chr18	-	3585	1	NIC	ENSMUSG00000036225.16	novel	1772	5	NA	NA	13181	1585	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAACAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	15109111	15105526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_15105500_15109100
ES.16118.7	chr18	-	2667	1	NIC	ENSMUSG00000036225.16	novel	749	4	NA	NA	140	-78571	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCTGTAGATTGCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	15197015	15194348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_15194300_15197000
ES.16119.1	chr18	+	291	2	Intergenic	novelGene_13443	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTTACATTTTACT	NA	False	NA	NA	False	AATAAA	-16	NA	15400646	15409013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_15400820_15408895
ES.1612.1	chr1	+	4143	2	NIC	ENSMUSG00000042708.13	novel	2092	10	NA	NA	-109	11	intron_retention	TRUE	canonical	3	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGGTTTTAATGTGT	NA	False	NA	14	True	ATTAAA	-25	NA	153320999	153328331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_153324770_153327958
ES.1612.2	chr1	+	5592	1	Genic_Genomic	ENSMUSG00000042708.13	novel	NA	NA	NA	NA	2211	591	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	153323319	153328911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_153323300_153328900
ES.1612.3	chr1	+	177	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACACTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	153326079	153326256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153326100_153326300
ES.16120.1	chr18	+	596	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	-20	-42	-20	42	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAAAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	15965830	15966426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_15965800_15966400
ES.16120.2	chr18	+	464	2	Genic_Genomic	ENSMUSG00000058064.7	novel	534	1	NA	NA	-20	42	multi-exon	FALSE	non_canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAAAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	15965830	15966426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_15966115_15966246
ES.16121.1	chr18	-	184	1	Intergenic	novelGene_13444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATCAAAGA	NA	False	NA	NA	False	NA	NA	NA	16122723	16122539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_16122500_16122700
ES.16122.1	chr18	+	181	1	Intergenic	novelGene_13445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	16603156	16603337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_16603200_16603300
ES.16123.1	chr18	-	4955	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	-111	-1	-111	1	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTTTGAACTTTTTCC	NA	False	NA	0	True	AATAAA	-21	NA	16942414	16721932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ES.16123.2	chr18	-	4175	16	NNC	ENSMUSG00000024304.15	novel	4843	16	NA	NA	-152	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.20394139953698	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGTTTGAACTTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	16941671	16721934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781656_16783328_16783556_16907564_16907677_16941391
ES.16123.3	chr18	-	3824	15	NNC	ENSMUSG00000024304.15	novel	4843	16	NA	NA	-68	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.0021254738702	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGACTGGTTTGAAC	NA	False	NA	-7	True	AATAAA	-14	NA	16941587	16721939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_16723279_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ES.16123.4	chr18	-	3997	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	625	221	-159	-75	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAAGGGGTGGCCTGGTA	NA	False	NA	NA	False	NA	NA	NA	16941678	16722154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ES.16123.5	chr18	-	3293	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	730	820	-54	-674	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATTTTGTTACCTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	16941573	16722753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ES.16124.1	chr18	+	4204	1	Intergenic	novelGene_13446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	16983731	16987935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_16983700_16987900
ES.16124.2	chr18	+	3820	2	Intergenic	novelGene_13447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	16983731	16987935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_16983981_16984364
ES.16125.1	chr18	+	177	1	Intergenic	novelGene_13448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	17170562	17170739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_17170600_17170700
ES.16126.1	chr18	+	162	1	Intergenic	novelGene_13449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	18081411	18081573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_18081400_18081600
ES.16127.1	chr18	-	338	1	Intergenic	novelGene_13450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	18235452	18235114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_18235100_18235500
ES.16128.1	chr18	-	3205	3	NNC	ENSMUSG00000117574.2	novel	967	8	NA	NA	-239773	-117059	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCATTGACTAGCCAACT	NA	False	NA	NA	False	AATAAA	-15	NA	18616987	18374656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_18377611_18422281_18422429_18616883
ES.16129.1	chr18	-	4926	1	Intergenic	novelGene_13451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTAAAGAAATTCAGGT	NA	False	NA	NA	False	NA	NA	NA	18828022	18823096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_18823100_18828000
ES.1613.1	chr1	+	161	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTAATGTC	6397	False	NA	NA	False	NA	NA	NA	153357744	153357905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153357700_153357900
ES.16130.1	chr18	-	183	1	Intergenic	novelGene_13452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTTATTACATA	NA	False	NA	3	True	NA	NA	NA	19051310	19051127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_19051100_19051300
ES.16131.1	chr18	-	4125	3	Intergenic	novelGene_13453	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCATTTAAAGTAAG	NA	False	NA	NA	False	AATAAA	-23	NA	19073274	19065669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_19066034_19069090_19070160_19070582
ES.16132.1	chr18	-	4164	1	Intergenic	novelGene_13454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	19567776	19563612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_19563600_19567800
ES.16133.1	chr18	-	5504	1	Intergenic	novelGene_13455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGAACCCTGTCTTGG	NA	False	NA	NA	False	NA	NA	NA	19895787	19890283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_19890300_19895800
ES.16134.1	chr18	+	175	1	Intergenic	novelGene_13456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACATACCA	NA	False	NA	12	True	NA	NA	NA	20144096	20144271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20144100_20144300
ES.16135.1	chr18	-	4675	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	-44	-1	-44	1	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAGGTGGTGAAGATA	NA	False	NA	NA	False	AATAAA	-18	NA	20192655	20163688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.10	chr18	-	3488	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	220	922	144	-76	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAATGTGTTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	20192391	20164611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.11	chr18	-	3464	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	-79	1245	-79	-399	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATAGACTATTGACTAT	NA	False	NA	NA	False	AATAAA	-19	NA	20192690	20164934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.2	chr18	-	4665	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	-157	0	-81	0	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCAGGTGGTGAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	20192692	20163689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.3	chr18	-	4932	17	NNC	ENSMUSG00000024331.12	novel	4630	17	NA	NA	211	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	4.98709271519991	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGCAGGTGGTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	20192324	20163690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183853_20184232_20184318_20192240
ES.16135.4	chr18	-	4435	18	NNC	ENSMUSG00000024331.12	novel	3774	18	NA	NA	187	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.94088525786005	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTGCAGGTGGTGAAG	NA	False	NA	NA	False	AATAAA	-15	NA	20192348	20163691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20179524_20179595_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.5	chr18	-	4459	17	NNC	ENSMUSG00000024331.12	novel	4630	17	NA	NA	138	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	5.63159335801157	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGTGTGCAGGTGGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	20192397	20163693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20191221_20191315_20192240
ES.16135.6	chr18	-	4984	15	NIC	ENSMUSG00000024331.12	novel	4630	17	NA	NA	170	-12	intron_retention	FALSE	canonical	2	10	junction_3	2.64189171555813	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAATGGTCGTGTGCA	NA	False	NA	NA	False	AATAAA	-5	NA	20192365	20163701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.7	chr18	-	4221	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	244	165	168	-165	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTGTCTGTCTTGA	NA	False	NA	NA	False	AATATA	-16	NA	20192367	20163854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.8	chr18	-	3675	18	NNC	ENSMUSG00000024331.12	novel	3774	18	NA	NA	139	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.15503583534274	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTATGGGACTCTTTC	NA	False	NA	NA	False	AGTAAA	-20	NA	20192396	20164324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20164507_20164611_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16135.9	chr18	-	3434	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	211	863	211	-17	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTCTCTATTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	20192324	20164552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ES.16136.1	chr18	+	5987	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-191	86	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	43.6	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCTTTGTTATTTAGT	NA	False	NA	96	True	AAAAAG	-23	NA	20690939	20737664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
ES.16136.11	chr18	+	4863	12	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	36	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.0858444977077	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTCCATGTCTTCC	NA	False	NA	13	True	AATAAA	-22	NA	20691166	20737581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712203_20723126_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
ES.16136.12	chr18	+	5422	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	38	-404	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	54.7732294708525	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATGTATGGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	20691168	20737174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20709003_20709102_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.14	chr18	+	3841	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	43.6	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTCCATGTCTTC	NA	False	NA	12	True	AATAAA	-21	NA	20691186	20737580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20735310_20737180
ES.16136.15	chr18	+	5651	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	43.6	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACCTCTCTCCATGTCT	NA	False	NA	10	True	AATAAA	-19	NA	20691190	20737578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20735014_20735068
ES.16136.18	chr18	+	1000	7	FSM	ENSMUSG00000044393.16	ENSMUST00000121837.2	953	7	-54	7	37	-7	multi-exon	FALSE	canonical	3	147	junction_4	16.303544263612	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTGTGTTTGTGT	NA	False	NA	NA	False	ACTAAA	-17	NA	20691248	20715966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764
ES.16136.19	chr18	+	5559	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	37	-187	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	54.7732294708525	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAACTCAGTCTTGCGC	NA	False	NA	NA	False	AATACA	-43	NA	20691248	20737391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20709003_20709102_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.2	chr18	+	5929	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	-153	-10	-153	10	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTCTTCCTACTGAT	NA	False	NA	20	True	AATAAA	-29	NA	20690977	20737588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.20	chr18	+	5683	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	54.7732294708525	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTCCATGTCTTC	NA	False	NA	12	True	AATAAA	-21	NA	20691313	20737580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20709003_20709102_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.22	chr18	+	5715	15	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	67	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.8787482091059	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20691369	20737583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691585_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.23	chr18	+	1313	1	Intergenic	novelGene_13457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	20701308	20702621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20701300_20702600
ES.16136.24	chr18	+	2585	10	ISM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	16937	9372	16765	-9372	internal_fragment	FALSE	canonical	3	147	junction_2	15.6804509887272	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAATGGT	NA	False	NA	NA	False	NA	NA	NA	20708067	20728206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120
ES.16136.25	chr18	+	3648	1	Intergenic	novelGene_13458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20708134	20711782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20708100_20711800
ES.16136.26	chr18	+	5267	13	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	17715	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.0936168765761	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20709017	20737583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20709102_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723125_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.27	chr18	+	5168	11	ISM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	21259	-5	21087	5	3prime_fragment	FALSE	canonical	3	147	junction_4	11.207586716149	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20712389	20737583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.28	chr18	+	4993	12	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	21157	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.4900677152075	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTCCATGTCTTCCT	NA	False	NA	14	True	AATAAA	-23	NA	20712459	20737582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724907_20724998_20725323_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
ES.16136.29	chr18	+	5022	10	ISM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	22434	-1	22262	1	3prime_fragment	FALSE	canonical	3	147	junction_3	7.78095173333849	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCTCTCTCCATGTCTT	NA	False	NA	11	True	AATAAA	-20	NA	20713564	20737579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.3	chr18	+	5597	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	-18	187	-18	-187	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAACTCAGTCTTGCGC	NA	False	NA	NA	False	AATACA	-43	NA	20691112	20737391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16136.30	chr18	+	4580	9	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	24768	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	52.8605181113466	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTCCATGTCTTCC	NA	False	NA	13	True	AATAAA	-22	NA	20716070	20737581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20734769_20734826
ES.16136.31	chr18	+	4794	6	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	34115	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.16579553144	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20725417	20737583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20726374_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
ES.16136.33	chr18	+	5001	3	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	38580	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTCCATGTCTTCCTA	NA	False	NA	15	True	AATAAA	-24	NA	20729882	20737583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20731726_20734369_20736600_20736655
ES.16136.34	chr18	+	3825	2	ISM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	39982	-3	39810	3	3prime_fragment	FALSE	canonical	3	154	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTCCATGTCTTCC	NA	False	NA	13	True	AATAAA	-22	NA	20731112	20737581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_20731726_20734369
ES.16136.4	chr18	+	5693	15	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.3681140237877	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTCCATGTCTTCC	NA	False	NA	13	True	AATAAA	-22	NA	20691114	20737581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736600_20736655
ES.16136.5	chr18	+	5705	1	Genic_Genomic	ENSMUSG00000044393.16	novel	NA	NA	NA	NA	-16	-19154	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTACCTATGT	NA	False	NA	NA	False	NA	NA	NA	20691114	20696819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_20691100_20696800
ES.16136.6	chr18	+	5718	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	43.6	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTCCATGTCTTC	NA	False	NA	12	True	AATAAA	-21	NA	20691125	20737580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369_20736589_20736643
ES.16136.7	chr18	+	5721	16	NNC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.7844269678259	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCTCTCTCCATGTCTT	NA	False	NA	11	True	AATAAA	-20	NA	20691125	20737579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729143_20731395_20731726_20734369_20734529_20734583
ES.16136.9	chr18	+	5709	14	NIC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	24	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.4428570232756	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTCCATGTCTTCC	NA	False	NA	13	True	AATAAA	-22	NA	20691154	20737581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_20691402_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ES.16137.1	chr18	-	5707	2	NNC	ENSMUSG00000085595.2	novel	1704	3	NA	NA	60116	1170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCATTTAATAGTGGGG	8211	False	NA	NA	False	NA	NA	NA	20738201	20729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20731724_20734367
ES.16137.2	chr18	-	176	1	Intergenic	novelGene_13459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGAAAAATAATGT	8696	False	NA	NA	False	NA	NA	NA	20732339	20732163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20732200_20732300
ES.16137.3	chr18	-	299	1	Intergenic	novelGene_13460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGCTGGGCCAGCAA	8399	False	NA	NA	False	NA	NA	NA	20738013	20737714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20737700_20738000
ES.16138.1	chr18	+	1071	1	Intergenic	novelGene_13461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTCTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	20836452	20837523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20836500_20837500
ES.16139.1	chr18	+	4194	1	Intergenic	novelGene_13462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20846206	20850400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20846200_20850400
ES.1614.1	chr1	-	4667	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	-50	-1	-50	1	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCATTGATGTTCTT	NA	False	NA	0	True	AATAAA	-19	NA	153363456	153331502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.10	chr1	-	5387	28	NIC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	0	-2	intron_retention	FALSE	canonical	3	8	junction_22	45.9351245268251	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363397	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153352169_153352309_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.11	chr1	-	3151	20	NNC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	5615	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3244295971041	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153348270	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332072_153332437_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146
ES.1614.13	chr1	-	4042	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153363396	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153331892_153332449_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.15	chr1	-	1897	10	NNC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	15524	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.9349924351682	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153338361	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153331997_153332263_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297
ES.1614.16	chr1	-	3394	16	NIC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	6449	-6	intron_retention	FALSE	canonical	3	130	junction_11	23.1184390092026	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153347436	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365
ES.1614.17	chr1	-	2187	13	NNC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	13208	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.7109353360905	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153340677	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153331826_153332137_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600
ES.1614.18	chr1	-	4581	28	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	40.4622806960024	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153363363	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348323_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.21	chr1	-	3353	13	NIC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	9220	-6	intron_retention	FALSE	canonical	3	130	junction_10	18.2777566700317	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTGTGTCATTGA	NA	False	NA	-7	True	AATAAA	-12	NA	153344665	153331509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333915_153334005_153334236_153335083_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619
ES.1614.24	chr1	-	3108	6	NIC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	17086	-7	intron_retention	FALSE	canonical	3	154	junction_5	23.8880723374658	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGATTGTGTCATTG	NA	False	NA	-8	True	AATAAA	-11	NA	153336799	153331510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727
ES.1614.25	chr1	-	4334	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTGATTGTGTCATTG	NA	False	NA	-8	True	AATAAA	-11	NA	153363396	153331510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332059_153332323_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.26	chr1	-	5212	28	NIC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-51	-8	intron_retention	FALSE	canonical	3	8	junction_22	45.8405119705584	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153363457	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153352169_153352309_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.28	chr1	-	4463	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153363396	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332051_153332185_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.30	chr1	-	4622	28	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	40.4841414191679	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153363396	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348074_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.31	chr1	-	4531	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-3	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153363400	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332290_153332360_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.32	chr1	-	3377	7	NIC	ENSMUSG00000042699.12	novel	4561	28	NA	NA	15178	-8	intron_retention	FALSE	canonical	3	154	junction_5	11.4709778717132	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153338707	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153333478_153333798_153333915_153334005_153334236_153335083_153335466_153336023_153336136_153336727_153336889_153338297
ES.1614.34	chr1	-	4187	27	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-2235	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.595493380919	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153358531	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332321_153332383_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487
ES.1614.35	chr1	-	4216	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGATTGTGTCATT	NA	False	NA	-9	True	AATAAA	-10	NA	153363399	153331511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332014_153332398_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.4	chr1	-	4743	29	NIC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_23	45.1073973525227	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363396	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153352169_153352309_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.5	chr1	-	4513	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363395	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332051_153332140_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.6	chr1	-	4577	28	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	40.2510639380892	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363457	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363366
ES.1614.8	chr1	-	4914	28	NIC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	8	junction_22	45.9346765856858	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363425	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153352169_153352309_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.1614.9	chr1	-	4513	29	NNC	ENSMUSG00000042699.12	novel	4616	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.7712047150925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGTCATTGATGTT	NA	False	NA	-3	True	AATAAA	-16	NA	153363389	153331505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153332294_153332377_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ES.16140.1	chr18	+	220	1	Intergenic	novelGene_13463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACATGATTTGATCT	NA	False	NA	NA	False	NA	NA	NA	20850905	20851125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20850900_20851100
ES.16141.1	chr18	+	174	1	Intergenic	novelGene_13464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAATTAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	20861740	20861914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20861700_20861900
ES.16142.1	chr18	+	3270	1	Intergenic	novelGene_13465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAGAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20873132	20876402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20873100_20876400
ES.16143.1	chr18	+	3675	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATATAGTATTTATGAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	20878242	20881917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20878200_20881900
ES.16143.2	chr18	+	3383	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTCTGCTGAGTAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	20878411	20881794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20878400_20881800
ES.16143.3	chr18	+	3221	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTTCACAAAATTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	20878435	20881656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20878400_20881700
ES.16144.1	chr18	+	794	4	Antisense	novelGene_ENSMUSG00002076630.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.93025150224688	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTTTGTTTGTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20895669	20997371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20895821_20951304_20951388_20963808_20964032_20997034
ES.16144.2	chr18	+	493	3	Antisense	novelGene_ENSMUSG00002076630.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	7	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTTTGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	20895745	20997369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20895821_20951304_20951388_20997034
ES.16144.3	chr18	+	687	3	Antisense	novelGene_ENSMUSG00000033382.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_2	6.5	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGCATGCTTGGGTTAT	NA	False	NA	NA	False	AGTAAA	-17	NA	20895746	20964338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20895821_20951304_20951388_20963808
ES.16144.4	chr18	+	369	2	Intergenic	novelGene_13466	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	False	NA	14	True	NA	NA	NA	20895747	20911827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20895821_20911531
ES.16144.5	chr18	+	1861	2	Intergenic	novelGene_13467	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTTAAACTAAGACTC	NA	False	NA	NA	False	NA	NA	NA	20895919	20897969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20897291_20897479
ES.16144.6	chr18	+	3949	1	Intergenic	novelGene_13469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTGTGTGTGTGT	NA	False	NA	12	True	NA	NA	NA	20907876	20911825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20907900_20911800
ES.16144.7	chr18	+	2178	1	Intergenic	novelGene_13470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	20910159	20912337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_20910200_20912300
ES.16144.8	chr18	+	2081	1	Antisense	novelGene_ENSMUSG00000033382.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGGTTTTACTGATT	2330	False	NA	NA	False	AATAAA	-15	NA	20965456	20967537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_20965500_20967500
ES.16145.1	chr18	+	159	1	Intergenic	novelGene_13474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	21021918	21022077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21021900_21022100
ES.16146.1	chr18	+	177	1	Intergenic	novelGene_13475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTGAAGAGACAC	8299	False	NA	NA	False	NA	NA	NA	21034605	21034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21034600_21034800
ES.16147.1	chr18	+	155	1	Intergenic	novelGene_13476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAGATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	21045635	21045790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21045600_21045800
ES.16148.1	chr18	+	260	1	Intergenic	novelGene_13477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTTCCAGGGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	21047062	21047322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21047100_21047300
ES.16149.1	chr18	+	3002	1	Intergenic	novelGene_13479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTACAAATGAGACACTAT	NA	False	NA	NA	False	NA	NA	NA	21063198	21066200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21063200_21066200
ES.1615.1	chr1	-	187	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153365467	153365280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153365300_153365500
ES.16150.1	chr18	+	159	1	Intergenic	novelGene_13480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	21070623	21070782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21070600_21070800
ES.16151.1	chr18	-	5817	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGATGTCATTGTT	NA	False	NA	-3	True	AATATA	-16	NA	20879470	20817655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.11	chr18	-	5717	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	88	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	104.847210263316	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGGTGATGTCA	NA	False	NA	-8	True	AATATA	-11	NA	20879373	20817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833902_20839448_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.13	chr18	-	5670	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9522892891092	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGTGTGGTGATG	NA	False	NA	-11	True	AATATA	-8	NA	20879383	20817663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821003_20821054_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.14	chr18	-	2842	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	80	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.9522892891092	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGTGTGGTGATG	NA	False	NA	-11	True	AATATA	-8	NA	20879381	20817663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20818235_20821112_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.17	chr18	-	5175	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	63	-518	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	102.653467428042	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATTCCTATCCCAGC	NA	False	NA	NA	False	NA	NA	NA	20879398	20818173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825585_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.18	chr18	-	4458	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	1062	-522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	126.910292026385	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAAAATTCCTATCC	NA	False	NA	NA	False	NA	NA	NA	20878399	20818177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878365
ES.16151.19	chr18	-	5275	11	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	-25201	-522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	123.53335581939	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAAAATTCCTATCC	NA	False	NA	NA	False	NA	NA	NA	20904662	20818177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409_20878650_20903084_20903658_20904434
ES.16151.2	chr18	-	5613	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9522892891092	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGATGTCATTGTT	NA	False	NA	-3	True	AATATA	-16	NA	20879410	20817655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20820328_20820471_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.20	chr18	-	4266	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	-8060	-523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	104.376721542689	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTAAAATTCCTATC	8894	False	NA	NA	False	NA	NA	NA	20887521	20818178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20887488
ES.16151.22	chr18	-	5108	8	NIC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	63	-523	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	107.380308307645	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTAAAATTCCTATC	NA	False	NA	NA	False	NA	NA	NA	20879398	20818178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20861018_20861136_20878409
ES.16151.23	chr18	-	5403	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	72	-523	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	125.675066032297	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTAAAATTCCTATC	NA	False	NA	NA	False	NA	NA	NA	20879389	20818178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
ES.16151.25	chr18	-	4848	4	ISM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	52736	524	52736	-524	3prime_fragment	FALSE	canonical	3	269	junction_3	30.3461511379761	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACTAAAATTCCTAT	4919	False	NA	NA	False	NA	NA	NA	20826725	20818179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448
ES.16151.26	chr18	-	5183	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	88	-526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	104.557325783515	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAACTAAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	20879373	20818181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825626_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.27	chr18	-	5103	8	NIC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	61	-527	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	107.158094154651	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACTAAAATTCC	NA	False	NA	NA	False	NA	NA	NA	20879400	20818182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20878409
ES.16151.28	chr18	-	4441	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	-20718	-527	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	104.376721542689	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACTAAAATTCC	NA	False	NA	NA	False	NA	NA	NA	20900179	20818182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20899967
ES.16151.31	chr18	-	5163	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	63	-565	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	99.8629529655517	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20879398	20818220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20822008_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.32	chr18	-	5353	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	62	-565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.518048883761	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20879399	20818220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20851400_20851573_20853085_20853200_20861018_20861136_20878409
ES.16151.33	chr18	-	5031	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	80	697	80	-697	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCGTGGTGGCACACACC	NA	False	NA	NA	False	ATTAAA	-14	NA	20879381	20818352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.34	chr18	-	4791	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	-7	1024	-7	-1024	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGTTTTAATGAGGTGG	NA	False	NA	3	True	AATAAA	-26	NA	20879468	20818679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.35	chr18	-	4715	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	48	-1028	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	99.8629529655517	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGGGTTTTAATGAG	NA	False	NA	-1	True	AATAAA	-22	NA	20879413	20818683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20822008_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.36	chr18	-	4451	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	-42	1399	-42	-1399	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGTCTGATAGAATCAAA	NA	False	NA	-17	True	AATAAA	-28	NA	20879503	20819054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.37	chr18	-	4490	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	106	-1402	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	125.675066032297	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCAGTCTGATAGAATC	NA	False	NA	-20	True	AATAAA	-25	NA	20879355	20819057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
ES.16151.39	chr18	-	3924	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	40	1844	40	-1844	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGACAGCAGAATGTAAT	NA	False	NA	NA	False	AATGAA	-16	NA	20879421	20819499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.4	chr18	-	5205	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	595	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.954677718528	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGGTGATGTCATTG	NA	False	NA	-5	True	AATATA	-14	NA	20878866	20817657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825454_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.40	chr18	-	3452	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	43	2313	43	-2313	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTCTTACTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	20879418	20819968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.41	chr18	-	3221	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	-8	2595	-8	-2595	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATACATGGTTCCCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	20879469	20820250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.42	chr18	-	2948	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	63	2797	63	-2797	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGAAAACATTATTATT	NA	False	NA	NA	False	NA	NA	NA	20879398	20820452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.43	chr18	-	2790	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	120	2898	120	-2898	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCGCGTGTCAGGGATC	NA	False	NA	NA	False	NA	NA	NA	20879341	20820553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.44	chr18	-	2951	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	51	-2939	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	129.125262181083	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCTGTACAGGACTTCT	NA	False	NA	NA	False	AAGAAA	-21	NA	20879410	20820594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20843528_20843662_20853085_20853200_20861018_20861136_20878409
ES.16151.45	chr18	-	2619	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	17	3172	17	-3172	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGGTGTTCAGCTTT	NA	False	NA	NA	False	AATATA	-13	NA	20879444	20820827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.46	chr18	-	2373	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	63	-3320	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	102.653467428042	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTTATGCCTTCATTG	NA	False	NA	NA	False	ATTAAA	-45	NA	20879398	20820975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825585_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.47	chr18	-	2470	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	18	3320	18	-3320	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTTATGCCTTCATTG	NA	False	NA	NA	False	ATTAAA	-45	NA	20879443	20820975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.48	chr18	-	2541	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	96	-3343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.518048883761	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATGTCACAATTTTGCA	NA	False	NA	NA	False	ATTAAA	-22	NA	20879365	20820998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20851400_20851573_20853085_20853200_20861018_20861136_20878409
ES.16151.49	chr18	-	2571	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	-13	-3346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.28795584866	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGATGTCACAATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	20879474	20821001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853204_20860926_20861136_20878409
ES.16151.5	chr18	-	5571	8	NIC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	120	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	107.380308307645	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGATGTCATT	NA	False	NA	-6	True	AATATA	-13	NA	20879341	20817658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20861018_20861136_20878409
ES.16151.50	chr18	-	1343	8	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	20920	-3347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	107.158094154651	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGATGTCACAATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	20858541	20821002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20858490
ES.16151.51	chr18	-	2728	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	62	-3348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.557325783515	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAGATGTCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	20879399	20821003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825967_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.52	chr18	-	2375	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	79	-3348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	104.376721542689	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAGATGTCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	20879382	20821003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861130_20878409
ES.16151.53	chr18	-	2283	8	NIC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	60	-3348	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	111.708805126799	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAGATGTCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	20879401	20821003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.55	chr18	-	2728	11	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	62	-3349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	151.326170902458	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACAAGATGTCACAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	20879399	20821004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20834995_20835137_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
ES.16151.56	chr18	-	1913	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	335	-3750	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	125.675066032297	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAGCTCCAATTGAAG	NA	False	NA	NA	False	AATATA	-18	NA	20879126	20821405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
ES.16151.57	chr18	-	4658	4	ISM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	74	18482	74	-18482	5prime_fragment	FALSE	canonical	3	294	junction_1	21.7460085737335	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATTTTCTTTGCCAGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	20879387	20836137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.58	chr18	-	192	1	Intergenic	novelGene_13468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAAGCAACAAC	NA	False	NA	NA	False	NA	NA	NA	20899829	20899637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20899600_20899800
ES.16151.6	chr18	-	5711	9	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	102.653467428042	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGATGTCATT	NA	False	NA	-6	True	AATATA	-13	NA	20879419	20817658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825585_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ES.16151.7	chr18	-	5935	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	60	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	125.675066032297	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGATGTCATT	NA	False	NA	-6	True	AATATA	-13	NA	20879401	20817658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20872050_20872241_20878409
ES.16151.8	chr18	-	4675	8	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	27991	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.773013211149	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGGTGATGTCAT	NA	False	NA	-7	True	AATATA	-12	NA	20851470	20817659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20850646_20850731_20851400
ES.16151.9	chr18	-	5856	10	NNC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	120	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.518048883761	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGGTGATGTCAT	NA	False	NA	-7	True	AATATA	-12	NA	20879341	20817659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20851400_20851573_20853085_20853200_20861018_20861136_20878409
ES.16152.1	chr18	-	156	1	Intergenic	novelGene_13471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAACCT	NA	False	NA	NA	False	NA	NA	NA	20921388	20921232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20921200_20921400
ES.16153.1	chr18	-	1929	1	Intergenic	novelGene_13472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCGGGGATGAATGTGAC	NA	False	NA	NA	False	NA	NA	NA	20929510	20927581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20927600_20929500
ES.16154.1	chr18	-	5612	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-349	72	at_least_one_novel_splicesite	TRUE	canonical	3	164	junction_9	17.2092464467595	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGATGAAGTTTTTCTT	NA	False	NA	50	True	AATGAA	-21	NA	21029499	20950207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.10	chr18	-	5291	30	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-208	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6894984323995	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACTAGCCTAGTTTCCT	NA	False	NA	-23	True	AATAAA	-18	NA	21029358	20950280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20950787_20950843_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996532_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.11	chr18	-	5572	30	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	53.6767308874467	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCACTAGCCTAGTTTCC	NA	False	NA	-24	True	AATAAA	-17	NA	21029450	20950281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21026122_21026206_21028967
ES.16154.13	chr18	-	5444	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-281	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	39.3240559651598	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCACTAGCCTAGTTTC	NA	False	NA	-25	True	AATAAA	-16	NA	21029431	20950282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970222_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.14	chr18	-	4840	8	ISM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	60035	4	-3320	-4	intron_retention	FALSE	canonical	3	192	junction_5	15.8268694288658	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCACTAGCCTAGTTT	NA	False	NA	-26	True	AATAAA	-15	NA	20969115	20950283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006
ES.16154.15	chr18	-	5304	23	ISM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	28879	7	-4291	-7	3prime_fragment	FALSE	canonical	3	164	junction_9	17.6391750336508	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTAGGCACTAGCCTAG	1266	False	NA	-29	True	AATAAA	-12	NA	21000271	20950286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006
ES.16154.16	chr18	-	5456	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-349	-84	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029499	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.17	chr18	-	5167	27	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-325	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	42.6415672136692	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029475	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21018119_21018315_21028967
ES.16154.18	chr18	-	5388	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-323	-84	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_23	35.6899917372375	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029473	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.19	chr18	-	5203	27	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.5666202530024	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029429	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961651_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.2	chr18	-	5494	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-323	22	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_23	35.6899917372375	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCATTGCCATTATT	NA	False	NA	0	True	AATAAA	-41	NA	21029473	20950257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.20	chr18	-	5427	30	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-284	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	61.6022105321673	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029434	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20981767_20981801_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.21	chr18	-	5395	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-268	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.8976291663535	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029418	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961505_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.23	chr18	-	5455	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-321	-84	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	40.2220082663657	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029471	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961498_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.24	chr18	-	5350	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-219	-84	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	40.8363302384891	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGATGCCTTTTTTA	NA	False	NA	-106	True	AATAAA	-23	NA	21029369	20950363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996077_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.29	chr18	-	4208	21	NIC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	-89	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	47.3443766460178	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21029450	20950368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.3	chr18	-	5464	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-322	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_23	38.3663862233171	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTAGTTTCCTGTGAAA	NA	False	NA	-17	True	AATAAA	-24	NA	21029472	20950274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.30	chr18	-	5297	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-284	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	52.6344124841441	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21029434	20950368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000873_21000911_21003690_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.31	chr18	-	1670	5	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	5316	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.3319063822342	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	20960479	20950368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20960147
ES.16154.34	chr18	-	5038	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-47713	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	41.058740276112	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21076863	20950368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21076744
ES.16154.35	chr18	-	4774	27	NIC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	10875	-89	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	42.0844635347288	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTATTAGATGCCTT	NA	False	NA	-111	True	AATAAA	-18	NA	21018260	20950368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21003655_21003810_21006939_21007115_21007671_21007762_21018119
ES.16154.38	chr18	-	5209	28	NIC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	-90	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	52.5285212226476	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	NA	False	NA	-112	True	AATAAA	-17	NA	21029450	20950369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21028967
ES.16154.40	chr18	-	3573	19	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	2396	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	49.5583270276326	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	7953	False	NA	-112	True	AATAAA	-17	NA	20993584	20950369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979643_20980184_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489
ES.16154.41	chr18	-	5268	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-268	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	54.0981133436919	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	NA	False	NA	-112	True	AATAAA	-17	NA	21029418	20950369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980368_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.42	chr18	-	3768	21	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-2182	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	72.5640923597891	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	3375	False	NA	-112	True	AATAAA	-17	NA	20998162	20950369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970222_20974584_20974740_20978634_20978710_20979505_20979637_20980174_20980367_20983950_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083
ES.16154.45	chr18	-	5937	28	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	-91	intron_retention	FALSE	non_canonical	0	0	junction_15	41.9040971835473	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATTTATTAGATGCC	NA	False	NA	-113	True	AATAAA	-16	NA	21029429	20950370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980367_20983950_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007762_21018119_21018315_21028967
ES.16154.46	chr18	-	5291	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-269	-91	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	50.7871081785807	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATTTATTAGATGCC	NA	False	NA	-113	True	AATAAA	-16	NA	21029419	20950370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964530_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.47	chr18	-	5950	24	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-7752	-91	intron_retention	FALSE	canonical	0	0	junction_13	44.4687609388084	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATTTATTAGATGCC	NA	False	NA	-113	True	AATAAA	-16	NA	21003732	20950370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979491_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_21000911_21003655
ES.16154.49	chr18	-	5529	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-416	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	64.4184641264301	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATAAATTTATTAGATG	NA	False	NA	-115	True	AATAAA	-14	NA	21029566	20950372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996520_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006935_21007122_21007671_21007762_21018119_21018315_21028967
ES.16154.5	chr18	-	5370	28	NIC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	51.8525925873017	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTAGTTTCCTGTGA	NA	False	NA	-19	True	AATAAA	-22	NA	21029450	20950276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.50	chr18	-	5282	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-300	-209	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTAAGTTGATCTGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	21029450	20950488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.51	chr18	-	5104	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-350	-433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	41.1617485150513	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTCTGTAAGACCAG	NA	False	NA	NA	False	AATACA	-20	NA	21029500	20950712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007106_21007666_21007762_21018119_21018315_21028967
ES.16154.52	chr18	-	4733	28	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-291	-622	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	40.7622165619067	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGCCGTGTCTTAAAAA	NA	False	NA	NA	False	CATAAA	-5	NA	21029441	20950901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.53	chr18	-	4849	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-284	-626	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTAAGCCGTGTCTTA	NA	False	NA	NA	False	CATAAA	-1	NA	21029434	20950905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.54	chr18	-	2081	4	ISM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	69742	629	6387	-629	3prime_fragment	FALSE	canonical	3	201	junction_3	15.369522511198	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTATTAAGCCGTGTC	NA	False	NA	NA	False	AATACA	-18	NA	20959408	20950908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023
ES.16154.55	chr18	-	4677	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-279	-736	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	40.4005455610769	408	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACACAGTACTCTGGG	NA	False	NA	NA	False	AATACA	-15	NA	21029429	20951015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.56	chr18	-	5332	25	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-298	1957	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_5	15.2751954888382	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCCCTTCTGTTTTCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	21029448	20960255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.57	chr18	-	178	1	Intergenic	novelGene_13473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCTAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	20976114	20975936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_20975900_20976100
ES.16154.58	chr18	-	2545	12	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-4900	19	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_11	50.9189925435774	346	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCCAAAACAGTTACT	657	False	NA	NA	False	NA	NA	NA	21000880	20977706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816
ES.16154.59	chr18	-	3089	17	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-325	-648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.8391037492037	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGGCTTATTCTAGC	NA	False	NA	NA	False	NA	NA	NA	21029475	20978373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20978710_20979491_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.60	chr18	-	3324	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-290	319	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_10	12.8571640211466	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCAGATGCCTTCCATA	NA	False	NA	NA	False	AATAAA	-25	NA	21029440	20978882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.62	chr18	-	2975	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-300	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_10	44.5334331336207	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTCTATGGTCATTC	NA	False	NA	0	True	AATAAA	-30	NA	21029450	20979199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.63	chr18	-	3171	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-456	0	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_10	12.8571640211466	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGTTCTATGGTCAT	NA	False	NA	-2	True	AATAAA	-28	NA	21029606	20979201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.64	chr18	-	2928	16	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-279	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	51.3934712671648	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATAACCTGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	21029429	20979210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.65	chr18	-	3520	15	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-279	-12	intron_retention	FALSE	canonical	3	169	junction_9	12.4074122020275	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATTTGTATAACCTG	NA	False	NA	-14	True	AATAAA	-16	NA	21029429	20979213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.66	chr18	-	3075	10	NIC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-7773	-1035	intron_retention	FALSE	canonical	3	189	junction_1	8.85688683705762	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGTATTGTCTGAACA	NA	False	NA	NA	False	AATAAA	-27	NA	21003753	20980236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_21000911_21003655
ES.16154.67	chr18	-	2695	14	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-279	2237	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_8	12.0629512516386	336	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTTTAGTTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	21029429	20983623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.68	chr18	-	3132	11	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-279	-6395	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_5	13.186735759846	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTGTCACATTATC	NA	False	NA	NA	False	ATTAAA	-14	NA	21029429	20992255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.69	chr18	-	2965	11	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-268	-6551	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_5	13.186735759846	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGATTGTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	21029418	20992411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.70	chr18	-	12321	5	NIC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-280	-6551	intron_retention	FALSE	canonical	3	202	junction_1	4.18330013267038	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGATTGTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	21029430	20992411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.71	chr18	-	2939	11	NNC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-284	-6551	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	53.6534248673838	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGATTGTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	21029434	20992411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.72	chr18	-	4565	10	NIC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-312	-6551	intron_retention	FALSE	canonical	3	202	junction_6	5.83941481932041	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGATTGTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	21029462	20992411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.73	chr18	-	5340	9	NIC	ENSMUSG00000033382.16	novel	2703	16	NA	NA	-280	-6551	intron_retention	FALSE	canonical	3	202	junction_5	5.75407464324195	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAGATTGTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	21029430	20992411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_20993596_20995951_20996053_20996524_20996676_20998083_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.74	chr18	-	1965	12	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-260	-6748	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.6476018557188	318	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	21029410	20992608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_20992737_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ES.16154.75	chr18	-	161	1	Intergenic	novelGene_13478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	21054498	21054337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21054300_21054500
ES.16155.1	chr18	+	4903	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-49	-3506	-49	3506	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTGTTTTGG	5292	False	NA	NA	False	AATAAA	-43	NA	21077632	21120425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.10	chr18	+	2770	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	244	-1608	244	1470	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGCATCATCTGTTGCA	1463	False	NA	NA	False	AATACA	-19	NA	21094772	21118389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.11	chr18	+	4692	5	NIC	ENSMUSG00000033107.7	novel	1406	6	NA	NA	244	3487	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	49.9268214489967	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTTCACTGTGTCT	1463	False	NA	NA	False	AATAAA	-24	NA	21094772	21120406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21094858_21107355_21107513_21112107_21112199_21114227_21114336_21116155
ES.16155.12	chr18	+	1146	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	257	3	257	-3	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTCTGCGTTTGAAG	1476	False	NA	NA	False	AATATA	-8	NA	21094785	21116778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.13	chr18	+	4772	6	NNC	ENSMUSG00000033107.7	novel	1348	6	NA	NA	405	3489	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	47.3767875652202	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTCACTGTGTCTAT	1624	False	NA	NA	False	AATAAA	-26	NA	21094933	21120408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21095002_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.14	chr18	+	4452	3	ISM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	17577	-3625	17577	3487	3prime_fragment	FALSE	canonical	3	112	junction_2	10	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTTCACTGTGTCT	NA	False	NA	NA	False	AATAAA	-24	NA	21112105	21120406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_21112199_21114227_21114336_21116155
ES.16155.2	chr18	+	4785	5	NIC	ENSMUSG00000033107.7	novel	1348	6	NA	NA	-36	3496	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	50.2020915898929	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCTATTTGGGGT	5305	False	NA	NA	False	AATAAA	-33	NA	21077645	21120415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21077815_21107355_21107513_21112107_21112199_21114227_21114336_21116155
ES.16155.3	chr18	+	843	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	-15	520	-15	-382	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGCCCTTACATTCTT	5326	False	NA	NA	False	NA	NA	NA	21077666	21116399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.4	chr18	+	2427	1	Genic_Genomic	ENSMUSG00000033107.7	novel	NA	NA	NA	NA	-9	-36682	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTGTTTTTCATATTAT	5332	False	NA	NA	False	NA	NA	NA	21077672	21080099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_21077700_21080100
ES.16155.5	chr18	+	1049	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	34	265	34	-127	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTCTCATGCTCTAAT	5375	False	NA	NA	False	ATTAAA	-18	NA	21077715	21116654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.6	chr18	+	1474	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	36	-162	36	162	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTGATAGAAGAT	5377	False	NA	NA	False	NA	NA	NA	21077717	21117081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.7	chr18	+	5426	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	-376	-3644	-376	3506	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTGTTTTGG	843	False	NA	NA	False	AATAAA	-43	NA	21094152	21120425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.8	chr18	+	861	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	111	434	111	-434	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTTGTCTTTGTTAT	1330	False	NA	NA	False	NA	NA	NA	21094639	21116347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ES.16155.9	chr18	+	4800	6	NNC	ENSMUSG00000033107.7	novel	1406	6	NA	NA	156	3487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.2445672484888	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTTCACTGTGTCT	1375	False	NA	NA	False	AATAAA	-24	NA	21094684	21120406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21094858_21107355_21107464_21110811_21110881_21112107_21112199_21114227_21114336_21116155
ES.16156.1	chr18	-	994	1	Antisense	novelGene_ENSMUSG00000033107.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGGGGCATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	21094852	21093858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_21093900_21094900
ES.16157.1	chr18	-	203	1	Intergenic	novelGene_13481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACGAAAAAACTGCCTGAAT	NA	False	NA	NA	False	NA	NA	NA	21095912	21095709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21095700_21095900
ES.16158.1	chr18	-	322	1	Intergenic	novelGene_13482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTTGGCGAGAGA	NA	False	NA	NA	False	NA	NA	NA	21128041	21127719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21127700_21128000
ES.16158.2	chr18	-	180	1	Intergenic	novelGene_13483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCACTGTGT	NA	False	NA	NA	False	NA	NA	NA	21128042	21127862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21127900_21128000
ES.16159.1	chr18	+	2478	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-79	603	-79	85	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTTTTTCTGTTGT	NA	False	NA	15	True	AATATA	-25	NA	21134318	21160677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.10	chr18	+	3543	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-552	-720	15	31	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACATTTTTAGGTCTCA	NA	False	NA	34	True	ATTAAA	-13	NA	21134412	21161312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.11	chr18	+	3341	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-573	1	77	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	False	NA	2	True	ATTAAA	-14	NA	21134474	21161280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.12	chr18	+	2352	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-84	3	-84	-3	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTTTTGTAAAAAACCT	NA	False	NA	7	True	AATAAA	-18	NA	21134880	21160589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.13	chr18	+	2226	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	-222	-235	-35	85	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTTTTTCTGTTGT	NA	False	NA	15	True	AATATA	-25	NA	21134929	21160677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
ES.16159.14	chr18	+	926	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-105	1948	-22	-1109	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGGTTTTTAATTGAAAA	NA	False	NA	17	True	AATAAA	-22	NA	21134942	21159333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.15	chr18	+	2211	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-105	663	-22	26	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTAATGACTTTATTT	NA	False	NA	36	True	NA	NA	NA	21134942	21160618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.16	chr18	+	1799	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-22	494	-22	-344	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGGATTGAAGTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	21134942	21160098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.17	chr18	+	1070	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	-21	1222	-21	-1072	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATTCTCTAGACAGT	NA	False	NA	54	True	AATAAA	-14	NA	21134943	21159370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.19	chr18	+	1882	4	NIC	ENSMUSG00000024317.16	novel	2769	6	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	201.644902406847	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134956	21160585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21150875_21150933_21153944_21154057_21159142
ES.16159.2	chr18	+	3080	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-76	-2	-76	1	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGTCTTAATTAAAAT	NA	False	NA	4	True	ATTAAA	-16	NA	21134321	21161282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.20	chr18	+	2882	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	False	NA	2	True	ATTAAA	-14	NA	21134984	21161280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
ES.16159.21	chr18	+	1788	3	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	124.5	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134996	21160592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21157465_21157574_21159142
ES.16159.22	chr18	+	2810	6	NNC	ENSMUSG00000024317.16	novel	3002	7	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	187.333926452205	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	False	NA	2	True	ATTAAA	-14	NA	21134999	21161280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21135227_21141781_21141948_21143733_21143850_21150881_21150933_21153944_21154057_21159142
ES.16159.23	chr18	+	5631	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	40	-1	intron_retention	FALSE	canonical	3	249	junction_5	89.1843035516901	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGCAGTTTTGTAAA	NA	False	NA	1	True	AATAAA	-12	NA	21135004	21160583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21157574_21159142
ES.16159.24	chr18	+	1992	5	NIC	ENSMUSG00000024317.16	novel	2769	6	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	26	junction_2	194.739569682178	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGCAGTTTTGTAAAA	NA	False	NA	2	True	AATAAA	-13	NA	21135011	21160584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21141781_21141948_21150875_21150933_21153944_21154057_21159142
ES.16159.25	chr18	+	1230	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	48	993	-35	-843	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGTAGAATGGAAACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	21135012	21159599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.26	chr18	+	941	6	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	-32	-1072	combination_of_known_junctions	FALSE	canonical	3	50	junction_3	152.012367917877	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATTCTCTAGACAGT	NA	False	NA	54	True	AATAAA	-14	NA	21135015	21159370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
ES.16159.27	chr18	+	2125	6	NNC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	204.239663141124	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21135017	21160592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21135227_21141781_21141948_21143733_21143850_21148712_21148785_21153944_21154057_21159142
ES.16159.29	chr18	+	2088	6	NNC	ENSMUSG00000024317.16	novel	2769	6	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.253339840119	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21135023	21160585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21135227_21141790_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.3	chr18	+	2841	5	NIC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	111.930782182561	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	False	NA	2	True	ATTAAA	-14	NA	21134327	21161280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21134598_21135013_21135227_21153944_21154057_21157465_21157574_21159142
ES.16159.30	chr18	+	2008	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	-20	781	-20	58	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATTTTGATTTTCTTA	NA	False	NA	-82	True	AATATA	-23	NA	21135027	21160500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.31	chr18	+	2154	7	NNC	ENSMUSG00000024317.16	novel	3002	7	NA	NA	-19	-9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	209.935505969492	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATTTTGGATGTGCAGT	NA	False	NA	-7	True	AATAAA	-4	NA	21135028	21160575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21135227_21141781_21141948_21143733_21143850_21148712_21148785_21150875_21150933_21153944_21154057_21159142
ES.16159.32	chr18	+	1827	5	NIC	ENSMUSG00000024317.16	novel	2271	7	NA	NA	-32	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	174.501253577159	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21135119	21160585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21135227_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.33	chr18	+	1720	4	ISM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	15909	9	7093	-1	3prime_fragment	FALSE	canonical	3	249	junction_3	106.849842718129	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGCAGTTTTGTAAA	NA	False	NA	1	True	AATAAA	-12	NA	21150873	21160583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.34	chr18	+	165	1	Intergenic	novelGene_13487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAAGAGGACAGAG	NA	False	NA	NA	False	NA	NA	NA	21151939	21152104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21151900_21152100
ES.16159.35	chr18	+	1172	1	NIC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	9305	-6185	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGGCATGGTAACACAT	NA	False	NA	NA	False	NA	NA	NA	21153085	21154257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21153100_21154300
ES.16159.36	chr18	+	2357	3	ISM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	18978	-685	10162	-3	3prime_fragment	FALSE	canonical	3	249	junction_2	20	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGTGTGTCTTAATT	NA	False	NA	-1	True	ATTAAA	-11	NA	21153942	21161277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_21154057_21157465_21157574_21159142
ES.16159.37	chr18	+	4731	1	NIC	ENSMUSG00000024317.16	novel	3002	7	NA	NA	12149	68	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCCATACATCTTAAT	NA	False	NA	-2	True	AATATA	-8	NA	21155929	21160660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21155900_21160700
ES.16159.38	chr18	+	4185	1	NIC	ENSMUSG00000024317.16	novel	3002	7	NA	NA	13314	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTGTGTCTTAATTAA	NA	False	NA	1	True	ATTAAA	-13	NA	21157094	21161279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21157100_21161300
ES.16159.4	chr18	+	2423	7	NIC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	154.918258015854	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134339	21160592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
ES.16159.5	chr18	+	1166	8	NNC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	-58	-1072	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.308540406814	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATTCTCTAGACAGT	NA	False	NA	54	True	AATAAA	-14	NA	21134339	21159370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21134531_21135038_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.6	chr18	+	2450	8	NNC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	171.257057057036	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134356	21160585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150881_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.7	chr18	+	2536	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	-31	-83	-31	83	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTTTTTTTCTGTT	NA	False	NA	13	True	AATATA	-23	NA	21134366	21160675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ES.16159.8	chr18	+	1103	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	-11	1910	-11	-1072	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATTCTCTAGACAGT	NA	False	NA	54	True	AATAAA	-14	NA	21134386	21159370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ES.16159.9	chr18	+	5938	8	NNC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	213.335990629709	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGTTTTGTAAAAA	NA	False	NA	3	True	AATAAA	-14	NA	21134400	21160585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21155111_21155992_21158573_21159142
ES.1616.1	chr1	-	161	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGAGTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	153372529	153372368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153372400_153372500
ES.16160.1	chr18	-	4825	1	Antisense	novelGene_ENSMUSG00000024317.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2936	False	NA	NA	False	NA	NA	NA	21145984	21141159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_21141200_21146000
ES.16160.2	chr18	-	172	1	Intergenic	novelGene_13484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCTGAGCAAGTACAGA	5648	False	NA	NA	False	NA	NA	NA	21143272	21143100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21143100_21143300
ES.16160.3	chr18	-	175	1	Intergenic	novelGene_13485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACTATTTTGC	4572	False	NA	NA	False	NA	NA	NA	21144348	21144173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21144200_21144300
ES.16161.1	chr18	-	165	1	Intergenic	novelGene_13486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTTCACACA	NA	False	NA	NA	False	NA	NA	NA	21149113	21148948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21148900_21149100
ES.16162.1	chr18	+	177	1	Intergenic	novelGene_13488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGTAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	21173133	21173310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21173100_21173300
ES.16163.1	chr18	+	2963	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-341	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.5871934353502	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCAAATTGGTGATC	NA	False	NA	1	True	AATAAA	-13	NA	21194638	21233248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21200688_21200901_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.12	chr18	+	2520	17	NIC	ENSMUSG00000024313.9	novel	617	7	NA	NA	4	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	16.6766116162727	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCAAATTGGTGATC	NA	False	NA	1	True	AATAAA	-13	NA	21194983	21233248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21195074_21200485_21200594_21203810_21203948_21207978_21207998_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.13	chr18	+	2681	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	648	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.5682554232319	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATTGGTGATCTTTCT	NA	False	NA	6	True	AATAAA	-18	NA	21195627	21233253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21195751_21198430_21198507_21199602_21199669_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.14	chr18	+	3890	15	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	4039	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.66382442154	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAAATTGGTGATCT	NA	False	NA	2	True	AATAAA	-14	NA	21199018	21233249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221832_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.15	chr18	+	3430	15	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-4693	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7873103552877	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTGGTGATCTTTCTC	NA	False	NA	7	True	AATAAA	-19	NA	21200707	21233254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21201829_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.16	chr18	+	5226	8	NIC	ENSMUSG00000024313.9	novel	2286	15	NA	NA	-473	5457	intron_retention	FALSE	canonical	3	34	junction_2	7.51596939312337	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCAGGTCTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	21204927	21224736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130
ES.16163.17	chr18	+	5522	12	NIC	ENSMUSG00000024313.9	novel	2286	15	NA	NA	2163	0	intron_retention	FALSE	canonical	3	34	junction_2	6.80665692630359	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21207563	21233256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.18	chr18	+	2982	13	NIC	ENSMUSG00000024313.9	novel	2286	15	NA	NA	2496	-3	intron_retention	FALSE	canonical	3	34	junction_2	6.51707159867238	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATTGGTGATCTTTCT	NA	False	NA	6	True	AATAAA	-18	NA	21207896	21233253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.19	chr18	+	3780	10	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	3768	0	intron_retention	FALSE	canonical	0	0	junction_1	19.7752807412452	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21209168	21233256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21209192_21209403_21209445_21213486_21213566_21221601_21221821_21222381_21222535_21224130_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.2	chr18	+	4746	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-340	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.5871934353502	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGATCTTTCTCCCTCC	NA	False	NA	12	True	AATAAA	-24	NA	21194639	21233259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21200688_21202674_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.20	chr18	+	2077	11	ISM	ENSMUSG00000024313.9	ENSMUST00000082235.5	2286	15	8084	7	8084	-7	3prime_fragment	FALSE	canonical	3	35	junction_8	6.35295206970744	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAAATTGGTGATCT	NA	False	NA	2	True	AATAAA	-14	NA	21213484	21233249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.21	chr18	+	212	1	Intergenic	novelGene_13490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGAGACTCTTATAT	NA	False	NA	NA	False	NA	NA	NA	21215664	21215876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21215700_21215900
ES.16163.22	chr18	+	1328	6	ISM	ENSMUSG00000024313.9	ENSMUST00000082235.5	2286	15	18728	8	18728	-8	3prime_fragment	FALSE	canonical	3	35	junction_3	3.96988664825584	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCAAATTGGTGATC	NA	False	NA	1	True	AATAAA	-13	NA	21224128	21233248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.3	chr18	+	5875	2	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-316	-16609	intron_retention	FALSE	canonical	3	103	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCTTGGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	21194663	21200633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905
ES.16163.4	chr18	+	2700	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-282	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21194697	21233256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.5	chr18	+	2772	18	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-281	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.4253350662005	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATTGGTGATCTTTCT	NA	False	NA	6	True	AATAAA	-18	NA	21194698	21233253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905_21195074_21198430_21198507_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16163.6	chr18	+	414	3	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-276	-16613	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.5	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	21194703	21200629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194806_21194905_21195074_21200485
ES.16163.7	chr18	+	8103	16	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-276	-3	intron_retention	FALSE	canonical	3	34	junction_5	15.8806660929432	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATTGGTGATCTTTCT	NA	False	NA	6	True	AATAAA	-18	NA	21194703	21233253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_21194811_21194905_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
ES.16164.1	chr18	-	182	1	Intergenic	novelGene_13489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAAAAATATACCTT	NA	False	NA	NA	False	NA	NA	NA	21211164	21210982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21211000_21211200
ES.16165.1	chr18	-	351	1	Intergenic	novelGene_13491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21216600	21216249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21216200_21216600
ES.16166.1	chr18	+	180	1	Intergenic	novelGene_13493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	21330008	21330188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_21330000_21330200
ES.16167.1	chr18	-	3706	2	NNC	ENSMUSG00000042680.9	novel	4932	5	NA	NA	171506	2340	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTCCTGAGTGAGTC	NA	False	NA	0	True	NA	NA	NA	21261674	21257917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_21258198_21258248
ES.16167.10	chr18	-	4095	2	Intergenic	novelGene_13494	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTATTCGGCCTCACAG	NA	False	NA	NA	False	NA	NA	NA	21350373	21346241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21347020_21347056
ES.16167.11	chr18	-	2225	1	Intergenic	novelGene_13495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAATGTTTTAATTAAGT	NA	False	NA	NA	False	NA	NA	NA	21393483	21391258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21391300_21393500
ES.16167.2	chr18	-	7279	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	-16	-2340	-16	2340	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTCCTGAGTGAGTC	NA	False	NA	0	True	NA	NA	NA	21433211	21257917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ES.16167.3	chr18	-	2220	2	Intergenic	novelGene_13492	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGAAGTCTTTCCTGA	NA	False	NA	-7	True	NA	NA	NA	21260196	21257924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21258214_21258265
ES.16167.4	chr18	-	3709	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	-53	1267	-53	19	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTGTGTGTATGCACA	NA	False	NA	NA	False	NA	NA	NA	21433248	21261524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ES.16167.5	chr18	-	4810	4	NIC	ENSMUSG00000042680.9	novel	4932	5	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	2.86744175568088	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21433199	21261543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_21264557_21280788_21281962_21301792_21301924_21432706
ES.16167.6	chr18	-	3213	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	1	1709	1	-423	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTGTGCCTTGTACGT	NA	False	NA	NA	False	AATAAA	-19	NA	21433194	21261966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ES.16167.7	chr18	-	3069	5	NIC	ENSMUSG00000042680.9	novel	4923	6	NA	NA	1	-426	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	5.62916512459885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGAGGTGTGCCTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	21433194	21261969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21432706
ES.16167.8	chr18	-	3073	6	NNC	ENSMUSG00000042680.9	novel	4923	6	NA	NA	1	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.11468474101777	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTAGAGGTGTGCCTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	21433194	21261970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_21263080_21264389_21264557_21280924_21281962_21301792_21301924_21369057_21369199_21432706
ES.16167.9	chr18	-	3175	6	NNC	ENSMUSG00000042680.9	novel	4923	6	NA	NA	1	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.62138772902208	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTAGAGGTGTGCCTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	21433194	21261970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_21263080_21264389_21264557_21280788_21281962_21301826_21301924_21369057_21369199_21432706
ES.16168.1	chr18	-	1482	1	Intergenic	novelGene_13496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTGTGTCTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	21506698	21505216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21505200_21506700
ES.16169.1	chr18	-	173	1	Intergenic	novelGene_13497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAATTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21523153	21522980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21523000_21523200
ES.1617.1	chr1	+	194	1	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	153372938	153373132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153372900_153373100
ES.16170.1	chr18	-	1684	4	Intergenic	novelGene_13498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACACATAGCAGAGTC	NA	False	NA	NA	False	GATAAA	-33	NA	21541565	21524083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21524846_21525873_21526043_21540705_21541272_21541378
ES.16171.1	chr18	-	7360	5	Intergenic	novelGene_13499	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCCTTGCGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	21555096	21543060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21549760_21551821_21551916_21552129_21552220_21552923_21553121_21554816
ES.16171.2	chr18	-	1513	1	Intergenic	novelGene_13500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	21544947	21543434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21543400_21544900
ES.16171.3	chr18	-	1853	5	Intergenic	novelGene_13501	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	21555088	21550429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_21551549_21551821_21551916_21552129_21552220_21552923_21553121_21554735
ES.16172.1	chr18	+	172	1	Intergenic	novelGene_13502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAATATGACA	NA	False	NA	NA	False	NA	NA	NA	22169392	22169564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_22169400_22169600
ES.16173.1	chr18	+	8179	13	NNC	ENSMUSG00000045215.18	novel	11353	12	NA	NA	309	-3325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.372677996249965	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	22477611	22659747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_22477712_22508189_22508273_22525700_22525910_22542977_22543087_22544557_22544667_22567610_22567733_22585385_22585504_22586638_22586759_22598433_22598598_22642187_22642285_22645128_22645235_22648926_22650881_22654859
ES.16173.2	chr18	+	4051	1	Intergenic	novelGene_13503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22574776	22578827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_22574800_22578800
ES.16173.3	chr18	+	3522	1	ISM	ENSMUSG00000045215.18	ENSMUST00000239326.2	11353	12	182248	0	181405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCGTTTTCATTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	22659550	22663072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_22659600_22663100
ES.16174.1	chr18	-	238	1	Intergenic	novelGene_13504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTTACATGAAACCCAC	NA	False	NA	NA	False	NA	NA	NA	22724286	22724048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_22724000_22724300
ES.16175.1	chr18	-	4866	10	FSM	ENSMUSG00000041923.16	ENSMUST00000164893.8	2175	10	-1586	-1105	-11	-38	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	23174721	22826475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_22828192_22852035_22852214_22884983_22885098_22903737_22903918_22956343_22956628_23045638_23045772_23053871_23053985_23054902_23055015_23085217_23085368_23172835
ES.16175.2	chr18	-	1118	2	Intergenic	novelGene_13505	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTATCAGTTGTATTA	NA	False	NA	NA	False	ATTAAA	-28	NA	23123338	23122007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_23122434_23122646
ES.16176.1	chr18	+	6225	20	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	627	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.4472679776448	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTAGTGGGGTTTGT	NA	False	NA	16	True	ATTAAA	-19	NA	23630518	23792771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
ES.16176.2	chr18	+	4208	15	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	700	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	2.58429321644651	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCAAAGTTATCCTACC	NA	False	NA	NA	False	AATAAA	-20	NA	23630591	23768830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ES.16176.3	chr18	+	4209	20	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	719	-1596	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.4472679776448	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGACCTCAGATTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	23630610	23790847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
ES.16176.4	chr18	+	1490	11	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	721	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	3.43656805548792	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACATCTACCCTCTCTG	NA	False	NA	NA	False	AATAAA	-11	NA	23630612	23737277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23737021
ES.16176.5	chr18	+	6241	22	NNC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	783	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.91925301781948	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCTTAGTGGGGTTTG	NA	False	NA	15	True	ATTAAA	-18	NA	23630674	23792770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23743520_23743599_23744120_23744214_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779346_23779944_23780111_23784572_23784706_23786385_23786435_23788869
ES.16176.6	chr18	+	5793	17	NNC	ENSMUSG00000024302.17	novel	6295	21	NA	NA	26002	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.44997735499815	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTGGAATGGAATTAT	NA	False	NA	-34	True	ATTAAA	-19	NA	23702620	23792721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_23702844_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
ES.16176.7	chr18	+	3919	1	NIC	ENSMUSG00000024302.17	novel	6295	21	NA	NA	38224	-18527	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	23714842	23718761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_23714800_23718800
ES.16176.8	chr18	+	1756	3	ISM	ENSMUSG00000024302.17	ENSMUST00000047954.15	1596	12	166337	10982	38285	-10982	internal_fragment	FALSE	canonical	3	4	junction_2	3	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23714903	23726306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_23716227_23723245_23723401_23726028
ES.16177.1	chr18	+	2439	8	FSM	ENSMUSG00000024277.15	ENSMUST00000170802.8	3936	8	2	1495	2	2	multi-exon	FALSE	canonical	2	2	junction_1	61.3021955860756	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTGAAATTTCTTTT	1808	False	NA	NA	False	AATAAA	-20	NA	23885391	24025423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_23885478_23905660_23905717_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ES.16177.2	chr18	+	3867	8	FSM	ENSMUSG00000024277.15	ENSMUST00000170802.8	3936	8	61	8	1	-4	multi-exon	FALSE	canonical	2	2	junction_1	61.3021955860756	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTCTGGACTTATT	1867	False	NA	10	True	AATAAA	-14	NA	23885450	24026910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_23885478_23905660_23905717_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ES.16177.3	chr18	+	2565	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-27	1488	-27	5	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAAATTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	23937013	24025426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ES.16177.4	chr18	+	4042	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	-16	0	-16	0	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTGGACTTATTCTTA	NA	False	NA	14	True	AATAAA	-18	NA	23937024	24026914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ES.16177.7	chr18	+	1913	3	ISM	ENSMUSG00000024277.15	ENSMUST00000165387.2	853	6	73737	-1435	73737	2	3prime_fragment	FALSE	canonical	3	115	junction_2	11	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTGAAATTTCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	24010896	24025423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24011141_24016594_24016754_24023913
ES.16177.8	chr18	+	3160	2	ISM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	79550	4	79431	-4	3prime_fragment	FALSE	canonical	3	115	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTCTGGACTTATT	NA	False	NA	10	True	AATAAA	-14	NA	24016590	24026910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24016754_24023913
ES.16178.1	chr18	-	1998	1	Intergenic	novelGene_13506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCAGTAGCTACTTTA	5304	False	NA	NA	False	NA	NA	NA	24015477	24013479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24013500_24015500
ES.16179.1	chr18	-	206	1	Intergenic	novelGene_13507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTGGGTTTCCTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	24065560	24065354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24065400_24065600
ES.1618.1	chr1	-	139	1	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	153373981	153373842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153373800_153374000
ES.16180.1	chr18	-	695	2	Intergenic	novelGene_13508	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCATCTTGGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	24084892	24081265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24081480_24084411
ES.16181.1	chr18	+	5566	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087694	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
ES.16181.11	chr18	+	4804	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-14	-1017	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGATTGACTCTGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24087734	24096713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
ES.16181.12	chr18	+	4020	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-13	-1800	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGTAGATGTTAAGTAGG	NA	False	NA	NA	False	AATAAA	-19	NA	24087735	24095930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
ES.16181.13	chr18	+	4508	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-9	-1015	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGATTGACTCTGTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	24087739	24096715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
ES.16181.14	chr18	+	3851	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-4	-1800	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGTAGATGTTAAGTAGG	NA	False	NA	NA	False	AATAAA	-19	NA	24087744	24095930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
ES.16181.15	chr18	+	5537	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.9055810925442	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTGTGTGGATCTC	NA	False	NA	17	True	GATAAA	-19	NA	24087746	24097725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24087974_24089395_24089911_24090111_24090254_24093072
ES.16181.16	chr18	+	3951	5	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.889736213063	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTGTGTGGATCTC	NA	False	NA	17	True	GATAAA	-19	NA	24087746	24097725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072_24093140_24094992
ES.16181.17	chr18	+	4714	5	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.8671601835563	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087746	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24087919_24089395_24089911_24090111_24090251_24093072_24095890_24096657
ES.16181.18	chr18	+	4299	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-2	-1350	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTCTTGTAAATGATTA	NA	False	NA	NA	False	TTTAAA	-19	NA	24087746	24096380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
ES.16181.19	chr18	+	5738	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.1331118487798	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087753	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24088241_24089395_24089849_24090111_24090254_24093072
ES.16181.2	chr18	+	5517	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	-47	2	-34	-2	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087714	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
ES.16181.21	chr18	+	4526	1	Genic_Genomic	ENSMUSG00000024276.8	novel	NA	NA	NA	NA	8448	3159	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGAGAAAAGGCTAGGT	7373	False	NA	NA	False	NA	NA	NA	24096363	24100889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_24096400_24100900
ES.16181.3	chr18	+	4487	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	-34	1019	-21	-1019	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGAAGGATTGACTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	24087727	24096711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
ES.16181.4	chr18	+	4173	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-17	-1358	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAAGTGTGTCTTGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	24087731	24096372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
ES.16181.5	chr18	+	5662	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087731	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
ES.16181.6	chr18	+	1237	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-16	1952	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTGTAACATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	24087732	24093304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
ES.16181.7	chr18	+	6976	3	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	90	junction_1	1	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGGATCTCTTT	NA	False	NA	20	True	GATAAA	-22	NA	24087732	24097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24089911_24090111_24090254_24093072
ES.16181.8	chr18	+	4645	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-15	-1017	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGATTGACTCTGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24087733	24096713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
ES.16181.9	chr18	+	5821	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGGATCTCTTTT	NA	False	NA	21	True	GATAAA	-23	NA	24087733	24097729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
ES.16182.1	chr18	+	178	1	Intergenic	novelGene_13509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	24103596	24103774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24103600_24103800
ES.16183.1	chr18	+	177	1	Intergenic	novelGene_13510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	24113230	24113407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24113200_24113400
ES.16184.1	chr18	-	2309	1	Antisense	novelGene_ENSMUSG00000024276.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGCTTTTGCCATGG	NA	False	NA	NA	False	NA	NA	NA	24094441	24092132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24092100_24094400
ES.16185.1	chr18	-	3816	5	NNC	ENSMUSG00000024274.11	novel	1592	3	NA	NA	-15	2041	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACATAGATTTGAGTTT	1547	False	NA	NA	False	CATAAA	-15	NA	24120298	24095833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24098891_24103983_24104159_24104438_24104903_24114581_24114666_24120262
ES.16185.2	chr18	-	2730	4	NNC	ENSMUSG00000024274.11	novel	1592	3	NA	NA	-23	1031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCATGCATGTATACCAA	1539	False	NA	NA	False	AATAAA	-15	NA	24120306	24096843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24098891_24103983_24104159_24104438_24104903_24120262
ES.16185.3	chr18	-	1995	5	NNC	ENSMUSG00000024274.11	novel	1592	3	NA	NA	-61	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGTCTACAAAGAAT	1501	False	NA	NA	False	AAAAAG	-45	NA	24120344	24097700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24098891_24103983_24104159_24104438_24104903_24114581_24114666_24120262
ES.16186.1	chr18	+	2387	3	NNC	ENSMUSG00000063281.10	novel	3040	3	NA	NA	-554	-646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	505	False	NA	45	True	NA	NA	NA	24122134	24137787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24122228_24123234_24123448_24135706
ES.16186.2	chr18	+	2394	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	-1	647	-1	-647	multi-exon	FALSE	canonical	3	128	junction_1	18.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTCTTGCATCGT	1058	False	NA	44	True	NA	NA	NA	24122687	24137786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24122789_24123234_24123448_24135706
ES.16186.3	chr18	+	3045	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	0	-5	0	5	multi-exon	FALSE	canonical	3	128	junction_1	18.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTGGGACACAGTT	1059	False	NA	NA	False	AATAAA	-31	NA	24122688	24138438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24122789_24123234_24123448_24135706
ES.16186.4	chr18	+	2542	4	NNC	ENSMUSG00000063281.10	novel	3040	3	NA	NA	39	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.3397786612521	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTCTTGCATCGT	1098	False	NA	44	True	NA	NA	NA	24122727	24137786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24122789_24123234_24123448_24134685_24134874_24135706
ES.16187.1	chr18	-	3176	1	Intergenic	novelGene_13511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTCCATGAGCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	24135554	24132378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24132400_24135600
ES.16187.2	chr18	-	2288	1	Antisense	novelGene_ENSMUSG00000063281.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAGAGGAGGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	24136892	24134604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24134600_24136900
ES.16188.1	chr18	-	209	1	Intergenic	novelGene_13512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATCTAGAAGTAAAAATG	NA	False	NA	NA	False	NA	NA	NA	24139998	24139789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24139800_24140000
ES.16189.1	chr18	-	5699	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	18	15	18	-15	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCTCTGTTAACCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	24153849	24142773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.10	chr18	-	5300	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	10	-862	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGATATCTTTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	24153417	24143620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
ES.16189.11	chr18	-	4721	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	3	1008	3	-1008	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAGAGCAGAGACCATT	NA	False	NA	NA	False	TATAAA	-32	NA	24153864	24143766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.12	chr18	-	3786	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	55	1660	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	114.170437893918	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAATTGCCTTACTTA	NA	False	NA	NA	False	AATAAA	-31	NA	24153812	24145321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151226_24153096
ES.16189.13	chr18	-	3172	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	-3	2563	-3	1660	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAATTGCCTTACTTA	NA	False	NA	NA	False	AATAAA	-31	NA	24153870	24145321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.14	chr18	-	3644	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-471	-1660	19	1660	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAATTGCCTTACTTA	NA	False	NA	NA	False	AATAAA	-31	NA	24153848	24145321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ES.16189.15	chr18	-	2984	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	49	1657	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	113.702340443028	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153818	24145324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151093_24153768
ES.16189.16	chr18	-	3158	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	25	1657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.638562447372	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153842	24145324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151226_24153751
ES.16189.17	chr18	-	3582	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	24	1657	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153403	24145324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
ES.16189.18	chr18	-	3134	4	NNC	ENSMUSG00000051469.15	novel	1513	4	NA	NA	17	1657	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	114.170437893918	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTGGAATTGCCTTAC	NA	False	NA	NA	False	AATAAA	-28	NA	24153410	24145324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151157_24153274
ES.16189.2	chr18	-	5759	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-40	-4206	10	-17	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGCTCTGTTAACCT	NA	False	NA	NA	False	AATAAA	-19	NA	24153417	24142775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ES.16189.20	chr18	-	3115	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	10	1654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.0483745156249	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGCTTGGAATTGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	24153857	24145327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150378_24150489_24150724_24151226_24153768
ES.16189.21	chr18	-	3417	5	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	24	1652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.464819824908	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24153843	24145329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274_24153555_24153768
ES.16189.22	chr18	-	3114	5	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	2	1652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.5524359320253	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24153865	24145329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24146681_24146725_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.23	chr18	-	3389	5	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	39	1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.064032643886	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGTAGCTTGGAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	24153828	24145330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151226_24153286_24153555_24153768
ES.16189.24	chr18	-	3054	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	36	1650	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	113.23427043082	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAAGTAGCTTGGAATT	NA	False	NA	NA	False	AATAAA	-21	NA	24153831	24145331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151157_24153768
ES.16189.25	chr18	-	3011	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-58	-1440	-8	1440	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAATGAAGCTTGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	24153435	24145541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ES.16189.26	chr18	-	2018	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-41	-464	9	464	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACAGTTGTAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	24153418	24146517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ES.16189.27	chr18	-	1491	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	75	4166	75	57	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTCTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	24153792	24146924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.28	chr18	-	1914	4	NIC	ENSMUSG00000051469.15	novel	1513	4	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCTTGTGAAGTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	24153395	24146984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
ES.16189.4	chr18	-	5575	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	10	147	10	-147	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGCTTCTGTCCTGAT	NA	False	NA	4	True	NA	NA	NA	24153857	24142905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.16189.5	chr18	-	5601	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-18	-4070	-18	-153	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTATTTGGCTTCTGT	NA	False	NA	-2	True	NA	NA	NA	24153395	24142911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ES.16189.6	chr18	-	5197	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	36	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.153713200307	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTATTTGGCTTCTGT	NA	False	NA	-2	True	NA	NA	NA	24153831	24142911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150937_24151093_24153768
ES.16189.7	chr18	-	5424	4	NNC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	18	-157	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	113.702340443028	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAGTTGTATTTGGCTT	NA	False	NA	-6	True	NA	NA	NA	24153849	24142915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24147743_24150340_24150489_24150724_24151093_24153768
ES.16189.8	chr18	-	5960	4	NIC	ENSMUSG00000051469.15	novel	5732	4	NA	NA	4	-158	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGTTGTATTTGGCT	NA	False	NA	-7	True	NA	NA	NA	24153373	24142916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
ES.16189.9	chr18	-	4858	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	20	854	20	-854	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTGTGTTAAACATTC	NA	False	NA	NA	False	AATAAA	-26	NA	24153847	24143612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ES.1619.1	chr1	-	228	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGGCTCATGGGTCC	NA	False	NA	NA	False	NA	NA	NA	153376814	153376586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153376600_153376800
ES.16190.1	chr18	+	894	1	Intergenic	novelGene_13513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24179199	24180093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24179200_24180100
ES.16191.1	chr18	+	177	1	Intergenic	novelGene_13516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAACAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	24183514	24183691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24183500_24183700
ES.16192.1	chr18	-	4276	1	Intergenic	novelGene_13514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGGGTCTTTTAAT	NA	False	NA	NA	False	AATAAA	-29	NA	24184687	24180411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24180400_24184700
ES.16192.2	chr18	-	1813	1	Intergenic	novelGene_13515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24184733	24182920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24182900_24184700
ES.16193.1	chr18	-	177	1	Intergenic	novelGene_13517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTGTTCTTTCAA	4315	False	NA	NA	False	NA	NA	NA	24201540	24201363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24201400_24201500
ES.16194.1	chr18	-	3627	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	98	-1227	-20	1227	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCTCTCTTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	24254912	24236586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ES.16194.10	chr18	-	764	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	105	1629	-13	-8	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGAGTTTTCAGTTTGC	NA	False	NA	-136	True	NA	NA	NA	24254905	24239442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ES.16194.2	chr18	-	2490	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	10	-2	10	2	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGGTGTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	24255000	24237811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ES.16194.4	chr18	-	3282	4	NIC	ENSMUSG00000047989.12	novel	2498	5	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	634	junction_2	63.5941995957353	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGGGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	24254919	24237816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24239716_24244771_24245830_24247133_24247245_24254705
ES.16194.5	chr18	-	2407	5	NNC	ENSMUSG00000047989.12	novel	2498	5	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	312.524399047498	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTTTTGTTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	24254905	24237821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247267_24254705
ES.16194.6	chr18	-	2358	5	NNC	ENSMUSG00000047989.12	novel	2498	5	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_4	304.411214478048	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGACATGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	24254891	24237826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247237_24254705
ES.16194.7	chr18	-	1111	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	66	1321	-52	296	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGGCCCGCCTGCAGGT	NA	False	NA	NA	False	NA	NA	NA	24254944	24239134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ES.16194.8	chr18	-	928	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	89	1481	-29	136	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTGTTTGCAAGTTGT	NA	False	NA	12	True	AAGAAA	-44	NA	24254921	24239294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ES.16195.1	chr18	+	5305	1	Intergenic	novelGene_13518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTGTTCTGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	24273869	24279174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24273900_24279200
ES.16196.1	chr18	+	3781	13	NNC	ENSMUSG00000000420.16	novel	3796	12	NA	NA	-31783	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.70688581334	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTTTGTACCCTAAC	NA	False	NA	28	True	AATAAA	-21	NA	24306617	24419677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24306795_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.10	chr18	+	3857	12	NNC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	235.224773811935	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338368	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400720_24404632_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.100	chr18	+	3816	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	176.033298617683	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24339017	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402556_24404673_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.102	chr18	+	3837	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	177.652497089746	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24339017	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405809_24413031_24413100_24415158_24415294_24417766
ES.16196.103	chr18	+	3495	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	-757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.783415789153	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTTTTTAATGAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	24339017	24419110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.104	chr18	+	5213	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	224.795159879668	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAATCTCATTGTGAC	NA	False	NA	6	True	ATTAAA	-34	NA	24339017	24419278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24390020_24391909_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.105	chr18	+	4354	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	244.259053480317	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24339019	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24370319_24370487_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.106	chr18	+	3319	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	4	-587	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	176.40247541725	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATCTCATTGTGACAT	NA	False	NA	8	True	ATTAAA	-36	NA	24339019	24419280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379112_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.107	chr18	+	3747	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	4	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	176.033298617683	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTGTGCCTTACGTTGG	NA	False	NA	27	True	ATTAAA	-38	NA	24339019	24419886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402575_24404778_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.108	chr18	+	3563	11	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	247.609450546622	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24339026	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400734_24405682_24405798_24413000_24413100_24415158_24415294_24417766
ES.16196.109	chr18	+	3440	11	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	11	1261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	250.664636516602	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGTATGGGTAAGGAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	24339026	24405987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379986_24384102_24384962_24387396_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718
ES.16196.11	chr18	+	2824	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-5	1158	-5	-1150	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTCTCAGTTGGAAAGT	NA	False	NA	NA	False	TTTAAA	-26	NA	24338395	24418717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.110	chr18	+	4058	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	216.324393112648	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24339034	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379216_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.111	chr18	+	3527	9	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	206.242575623948	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24339034	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.112	chr18	+	3121	10	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	19	-190	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	195.251847496041	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTTTGTACCCTAAC	NA	False	NA	28	True	AATAAA	-21	NA	24339034	24419677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.114	chr18	+	6439	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	23	-198	intron_retention	FALSE	canonical	3	98	junction_1	153.349759570501	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTCAGATTTTTGT	NA	False	NA	20	True	AATAAA	-13	NA	24339038	24419669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158
ES.16196.115	chr18	+	3248	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	36	-764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	219.344774675657	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTGGCATTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	24339051	24419103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370354_24370487_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.116	chr18	+	4075	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	216.125911732541	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24339066	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405798_24413000_24413100_24415158_24415294_24417766
ES.16196.117	chr18	+	3511	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	69	-601	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	215.924803654729	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTTGATTTTACAGAAA	NA	False	NA	-6	True	ATTAAA	-22	NA	24339084	24419266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379112_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.118	chr18	+	3794	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	216.324393112648	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATACTCTGAGTAGTTG	NA	False	NA	14	True	ATTAAA	-25	NA	24339086	24419873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371346_24379237_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.119	chr18	+	3533	11	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	88	-4	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	178.297392016821	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24339103	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.12	chr18	+	6682	12	NNC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	3	233	intron_retention	FALSE	non_canonical	0	0	junction_5	232.89251945873	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGGCTAAGATAATTT	NA	False	NA	NA	False	NA	NA	NA	24338403	24420108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397379_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158
ES.16196.120	chr18	+	5557	12	NNC	ENSMUSG00000000420.16	novel	3796	12	NA	NA	19	-760	intron_retention	FALSE	canonical	0	0	junction_2	230.586137792689	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGCATTTTTTAATGA	NA	False	NA	NA	False	AATAAA	-18	NA	24365672	24419107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158
ES.16196.121	chr18	+	180	1	Intergenic	novelGene_13522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	821	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATCTACCACTTA	NA	False	NA	NA	False	NA	NA	NA	24367688	24367868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24367700_24367900
ES.16196.122	chr18	+	176	2	Intergenic	novelGene_13523	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATTATAGGAA	NA	False	NA	NA	False	NA	NA	NA	24367689	24454048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24367837_24454019
ES.16196.123	chr18	+	2976	11	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	5644	764	-82	-764	3prime_fragment	FALSE	canonical	3	536	junction_9	41.5289055959822	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTGGCATTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	24371297	24419103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.124	chr18	+	2222	11	NNC	ENSMUSG00000000420.16	novel	3796	12	NA	NA	-22	-198	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	185.307204393137	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTCAGATTTTTGT	NA	False	NA	20	True	AATAAA	-13	NA	24379120	24419669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766_24418336_24419396
ES.16196.125	chr18	+	3303	7	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	34928	-355	-12470	347	3prime_fragment	FALSE	canonical	3	536	junction_5	45.6024487646588	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCAGGTCCTCAATTC	3159	False	NA	NA	False	GATAAA	-18	NA	24400581	24420222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.126	chr18	+	1586	7	NNC	ENSMUSG00000000420.16	novel	3796	12	NA	NA	-10530	-194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	229.419557434264	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGATTTTTGTACCC	5099	False	NA	24	True	AATAAA	-17	NA	24402521	24419673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766_24418336_24419312
ES.16196.127	chr18	+	2337	3	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	47345	0	-53	0	3prime_fragment	FALSE	canonical	3	536	junction_1	66	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24412998	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24413100_24415158_24415294_24417766
ES.16196.128	chr18	+	3898	2	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	47843	0	407	0	3prime_fragment	FALSE	canonical	3	668	junction_1	0	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24413496	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24415294_24417766
ES.16196.129	chr18	+	5176	1	NIC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	1602	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	884	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24414691	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24414700_24419900
ES.16196.13	chr18	+	3093	12	NIC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	45	-587	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	228.577599532991	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATCTCATTGTGACAT	NA	False	NA	8	True	ATTAAA	-36	NA	24338445	24419280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24338576_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.14	chr18	+	3578	11	NNC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	61	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	247.807667355149	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24338461	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404759_24415188_24415294_24417766
ES.16196.15	chr18	+	3466	12	NIC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	61	-198	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	228.577599532991	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTCAGATTTTTGT	NA	False	NA	20	True	AATAAA	-13	NA	24338461	24419669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24338576_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.16	chr18	+	3772	13	NNC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	171	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.70688581334	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338571	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338746_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.17	chr18	+	3897	13	NNC	ENSMUSG00000000420.16	novel	3796	12	NA	NA	-183	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.70688581334	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATATGATACTCTG	NA	False	NA	6	True	ATTAAA	-17	NA	24338640	24419865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338746_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.18	chr18	+	4317	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-178	-31	-178	23	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTTTTACTGAGGG	NA	False	NA	39	True	AATATA	-24	NA	24338645	24419898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.19	chr18	+	4339	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-158	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.600007613992	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATACTCTGAGTAGTTG	NA	False	NA	14	True	ATTAAA	-25	NA	24338665	24419873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.2	chr18	+	159	1	Intergenic	novelGene_13520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	24327524	24327683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24327500_24327700
ES.16196.20	chr18	+	3502	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-151	757	-151	-757	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTTTTTAATGAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	24338672	24419110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.21	chr18	+	3654	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-127	581	-127	-581	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGTGACATTTTTTT	NA	False	NA	14	True	ATTAAA	-42	NA	24338696	24419286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.22	chr18	+	4032	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-120	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	176.45134283674	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAGATTTTTGTACCC	NA	False	NA	24	True	AATAAA	-17	NA	24338703	24419673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404828_24405724_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.23	chr18	+	4517	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-117	13	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCCTTACGTTGGTT	NA	False	NA	29	True	ATTAAA	-40	NA	24338706	24419888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.24	chr18	+	3962	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-115	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	170.684767746945	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338708	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766_24419496_24419560
ES.16196.25	chr18	+	3799	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-104	-581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	209.183931409091	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGTGACATTTTTTT	NA	False	NA	14	True	ATTAAA	-42	NA	24338719	24419286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404673_24404775_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.26	chr18	+	4091	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-101	118	-101	-118	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCACTTTTTTAAGT	NA	False	NA	100	True	TTTAAA	-3	NA	24338722	24419749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.27	chr18	+	3056	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-100	1152	-100	-1152	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGTCTCAGTTGGAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	24338723	24418715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.28	chr18	+	2929	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-90	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	177.56915710662	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGGAGAT	NA	False	NA	NA	False	NA	NA	NA	24338733	24418689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413104_24415253_24415294_24417766
ES.16196.29	chr18	+	4761	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-86	-567	-86	559	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAGTAGTAAAGTC	NA	False	NA	NA	False	AATAAA	-22	NA	24338737	24420434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.3	chr18	+	3866	12	NIC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	-261	-197	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	236.105278380935	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTTCAGATTTTTGTA	NA	False	NA	21	True	AATAAA	-14	NA	24338139	24419670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.30	chr18	+	3878	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-83	-584	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCATTGTGACATTTT	NA	False	NA	11	True	ATTAAA	-39	NA	24338740	24419283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.31	chr18	+	3701	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-79	-757	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATTTTTTAATGAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	24338744	24419110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.32	chr18	+	4334	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-78	-123	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTCACTTTTT	NA	False	NA	95	True	NA	NA	NA	24338745	24419744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.33	chr18	+	4135	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-78	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.600007613992	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCACTTTTTTAAGT	NA	False	NA	100	True	TTTAAA	-3	NA	24338745	24419749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.34	chr18	+	3410	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-73	-762	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	177.613402741272	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTGGCATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	24338750	24419105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379273_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.35	chr18	+	3803	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-68	-589	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	177.955189828161	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAATCTCATTGTGAC	NA	False	NA	6	True	ATTAAA	-34	NA	24338755	24419278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.36	chr18	+	3701	11	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-63	-171	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	178.297392016821	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATGGTTTTATTCCTTA	NA	False	NA	47	True	AATAAA	-40	NA	24338760	24419696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.37	chr18	+	5643	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-63	-587	intron_retention	FALSE	canonical	3	467	junction_1	61.2984839309375	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATCTCATTGTGACAT	NA	False	NA	8	True	ATTAAA	-36	NA	24338760	24419280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24415294_24417766
ES.16196.38	chr18	+	2737	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-48	1419	-48	-1419	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTATAGTATAGTATGA	NA	False	NA	NA	False	ATTAAA	-21	NA	24338775	24418448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.39	chr18	+	3608	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-48	-588	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	223.117980306596	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338775	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24343985_24344026_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.4	chr18	+	3999	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-163	141	-163	-133	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGATTTAAAAATGTGT	NA	False	NA	85	True	NA	NA	NA	24338237	24419734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.40	chr18	+	3324	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-39	-762	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	175.834360186575	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTGGCATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	24338784	24419105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405798_24413000_24413100_24415158_24415294_24417766
ES.16196.41	chr18	+	4363	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-36	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	209.183931409091	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTTGAAAATATATG	NA	False	NA	-2	True	ATTAAA	-9	NA	24338787	24419857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24371298_24371352_24371393_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.42	chr18	+	4146	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	177.613402741272	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGAGTAGTTGTGCCT	NA	False	NA	19	True	ATTAAA	-30	NA	24338787	24419878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379273_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.43	chr18	+	3501	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-33	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	230.330137459739	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338790	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379233_24387574_24387742_24397381_24397590_24400587_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.44	chr18	+	3888	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-31	-139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.70688581334	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCGTTGTGATTTAAAA	NA	False	NA	79	True	NA	NA	NA	24338792	24419728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339026_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.45	chr18	+	7156	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-31	14	intron_retention	FALSE	canonical	3	467	junction_1	61.7016280910877	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCCTTACGTTGGTTT	NA	False	NA	30	True	ATTAAA	-41	NA	24338792	24419889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.46	chr18	+	4474	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.783415789153	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338795	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339409_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.47	chr18	+	3502	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-26	-588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.70688581334	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338797	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339094_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.48	chr18	+	3905	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-21	12	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGCCTTACGTTGGT	NA	False	NA	28	True	ATTAAA	-39	NA	24338802	24419887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.49	chr18	+	3477	9	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	263.066501810854	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24338803	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.5	chr18	+	4049	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-60	-12	-60	12	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGCCTTACGTTGGT	NA	False	NA	28	True	ATTAAA	-39	NA	24338340	24419887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.50	chr18	+	3240	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-11	-1150	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTCTCAGTTGGAAAGT	NA	False	NA	NA	False	TTTAAA	-26	NA	24338812	24418717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.51	chr18	+	3285	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-7	-586	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTCATTGTGACATT	NA	False	NA	9	True	ATTAAA	-37	NA	24338816	24419281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.53	chr18	+	3675	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-7	-196	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338816	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.54	chr18	+	4131	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-7	-190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.183931409091	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTTTGTACCCTAAC	NA	False	NA	28	True	AATAAA	-21	NA	24338816	24419677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338917_24338981_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.55	chr18	+	4363	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	-6	-249	-6	241	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGATAATTTGTATCTCG	NA	False	NA	NA	False	NA	NA	NA	24338817	24420116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.56	chr18	+	3884	12	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	178.295371979818	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCCTTACGTTGGTTT	NA	False	NA	30	True	ATTAAA	-41	NA	24338819	24419889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24379112_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.57	chr18	+	3937	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	177.212129632508	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24338822	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387689_24397504_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.58	chr18	+	3848	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	0	-195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.684767746945	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGATTTTTGTACC	NA	False	NA	23	True	AATAAA	-16	NA	24338823	24419672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338917_24338981_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.59	chr18	+	3930	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	-137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	170.684767746945	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGTTGTGATTTAAAAAT	NA	False	NA	81	True	NA	NA	NA	24338825	24419730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766_24418420_24418458
ES.16196.6	chr18	+	3515	14	NNC	ENSMUSG00000000420.16	novel	3977	13	NA	NA	-60	-581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	250.976436339416	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGTGACATTTTTTT	NA	False	NA	14	True	ATTAAA	-42	NA	24338340	24419286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338576_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.60	chr18	+	3295	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	2	-760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	176.033298617683	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGCATTTTTTAATGA	NA	False	NA	NA	False	AATAAA	-18	NA	24338825	24419107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402603_24404673_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.61	chr18	+	3730	11	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	190.487689890974	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338826	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.62	chr18	+	4076	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	3	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	219.344774675657	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338826	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370319_24370487_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.63	chr18	+	3100	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	5	-759	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATTTTTTAATGAG	NA	False	NA	NA	False	AATAAA	-19	NA	24338828	24419108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.64	chr18	+	3941	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	183.403407594721	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGATACTCTGAGTAGTT	NA	False	NA	13	True	ATTAAA	-24	NA	24338828	24419872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.65	chr18	+	3509	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	5	-761	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	219.344774675657	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGCATTTTTTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	24338828	24419106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370319_24370487_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.67	chr18	+	2923	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	9	-1447	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAAAGAATTATGAG	NA	False	NA	NA	False	AATAAA	-26	NA	24338832	24418420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.68	chr18	+	3722	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	9	-196	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	181.784587805557	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338832	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.7	chr18	+	3270	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-60	767	-60	-759	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATTTTTTAATGAG	NA	False	NA	NA	False	AATAAA	-19	NA	24338340	24419108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.70	chr18	+	3341	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	12	-588	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	183.403407594721	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338835	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.71	chr18	+	4254	15	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.254846633334	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338839	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370541_24370605_24370690_24370790_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.72	chr18	+	3723	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	23	-195	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	183.403407594721	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGATTTTTGTACC	NA	False	NA	23	True	AATAAA	-16	NA	24338846	24419672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.73	chr18	+	4591	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	29	233	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGGCTAAGATAATTT	NA	False	NA	NA	False	NA	NA	NA	24338852	24420108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.74	chr18	+	3832	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	33	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	174.339149042574	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338856	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415273_24417792
ES.16196.75	chr18	+	4652	15	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	35	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.704230231771	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGATTTTTGTAC	NA	False	NA	22	True	AATAAA	-15	NA	24338858	24419671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24338922_24338986_24339138_24345504_24346345_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.77	chr18	+	1114	4	ISM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	36	40224	36	-8044	5prime_fragment	FALSE	canonical	3	467	junction_1	97.3344748791506	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCCAGTTACTACTCC	NA	False	NA	NA	False	AATAAA	-14	NA	24338859	24379643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106
ES.16196.78	chr18	+	3141	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	36	-764	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	183.403407594721	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTGGCATTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	24338859	24419103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.79	chr18	+	4117	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	223.117980306596	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATACTCTGAGTAGTTG	NA	False	NA	14	True	ATTAAA	-25	NA	24338860	24419873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24343985_24344026_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.80	chr18	+	4008	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	175.834360186575	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338862	24419867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405798_24413000_24413100_24415158_24415294_24417766
ES.16196.81	chr18	+	1873	10	ISM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	47	13862	47	1279	5prime_fragment	FALSE	canonical	3	467	junction_1	62.4321854316968	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTTTCCTCATAAGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	24338870	24406005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718
ES.16196.82	chr18	+	1937	4	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-68	-588	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	288.856750349065	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338947	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24413000_24413100_24415158_24415294_24417766
ES.16196.83	chr18	+	5538	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-48	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	174.339149042574	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATATGATACTCTG	NA	False	NA	6	True	ATTAAA	-17	NA	24338967	24419865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24417435_24418331
ES.16196.85	chr18	+	3931	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	176.40247541725	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24338998	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379112_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.86	chr18	+	3641	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-15	-198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.41482698279	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTCAGATTTTTGT	NA	False	NA	20	True	AATAAA	-13	NA	24339000	24419669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402596_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.88	chr18	+	3846	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	176.033298617683	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATATGATACTCTG	NA	False	NA	6	True	ATTAAA	-17	NA	24339001	24419865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402541_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.89	chr18	+	3233	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-14	-764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.600007613992	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTGGCATTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	24339001	24419103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370537_24370605_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.9	chr18	+	3429	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	-48	596	-48	-588	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATCTCATTGTGACA	NA	False	NA	7	True	ATTAAA	-35	NA	24338352	24419279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.90	chr18	+	3042	11	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-14	-589	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	178.297392016821	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAAATCTCATTGTGAC	NA	False	NA	6	True	ATTAAA	-34	NA	24339001	24419278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339138_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.92	chr18	+	5639	12	ISM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	180	762	-12	-762	intron_retention	FALSE	canonical	3	467	junction_1	60.9773023752173	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTGGCATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	24339003	24419105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158
ES.16196.94	chr18	+	4004	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.183931409091	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATACTCTGAGTAGTTG	NA	False	NA	14	True	ATTAAA	-25	NA	24339003	24419873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339039_24339239_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.96	chr18	+	3187	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	-7	-763	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	217.058357541267	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATTGGCATTTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	24339008	24419104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24339409_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.97	chr18	+	3391	14	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	0	-587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	218.994339447528	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATCTCATTGTGACAT	NA	False	NA	8	True	ATTAAA	-36	NA	24339015	24419280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24370541_24370604_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ES.16196.99	chr18	+	3917	13	NNC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	176.45134283674	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGATACTCTGAGTAGT	NA	False	NA	12	True	ATTAAA	-23	NA	24339016	24419871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404828_24405724_24405859_24413000_24413100_24415158_24415294_24417766
ES.16197.1	chr18	-	247	1	Intergenic	novelGene_13519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGCCATGAATTAT	NA	False	NA	NA	False	NA	NA	NA	24322770	24322523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24322500_24322800
ES.16198.1	chr18	-	3016	1	Antisense	novelGene_ENSMUSG00000000420.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTATCAGGCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	24338751	24335735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24335700_24338800
ES.16198.2	chr18	-	2293	1	Antisense	novelGene_ENSMUSG00000000420.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAAAAATCAAACC	NA	False	NA	NA	False	TTTAAA	-13	NA	24338915	24336622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24336600_24338900
ES.16199.1	chr18	-	157	1	Intergenic	novelGene_13521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	24365140	24364983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24365000_24365100
ES.162.1	chr1	+	181	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	18188668	18188849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_18188700_18188800
ES.1620.1	chr1	+	181	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	153393486	153393667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153393500_153393700
ES.16200.1	chr18	+	207	1	Intergenic	novelGene_13524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATTTTATTAGTT	NA	False	NA	NA	False	NA	NA	NA	24458399	24458606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24458400_24458600
ES.16201.1	chr18	-	138	1	Intergenic	novelGene_13525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24508575	24508437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24508400_24508600
ES.16202.1	chr18	+	3160	5	Antisense	novelGene_ENSMUSG00000065532.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTGTACCCAGCTCT	NA	False	NA	NA	False	GGGGCT	-33	NA	24508663	24577242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_24508840_24512203_24512251_24538583_24538727_24570793_24570893_24574547
ES.16202.2	chr18	+	2974	3	Antisense	novelGene_ENSMUSG00000065532.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGTACCCAGCTCTT	NA	False	NA	NA	False	GGGGCT	-34	NA	24508704	24577243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_24508840_24538583_24538727_24574547
ES.16202.3	chr18	+	3161	5	Antisense	novelGene_ENSMUSG00000065532.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTGTACCCAGCTCT	NA	False	NA	NA	False	GGGGCT	-33	NA	24508718	24577242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_24508840_24538583_24538727_24570793_24570893_24571387_24571491_24574547
ES.16203.1	chr18	+	1100	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-32	-3	-13	3	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTAGTATTTAATTTAG	327	False	NA	20	True	GATAAA	-17	NA	24603893	24610858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ES.16203.10	chr18	+	307	1	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	25	-2072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTCCAGGCTTC	384	False	NA	NA	False	NA	NA	NA	24603950	24604257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24604000_24604300
ES.16203.2	chr18	+	1195	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-17	-113	1	113	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTCAGTCATGTGCAT	342	False	NA	130	True	TATAAA	-36	NA	24603908	24610968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ES.16203.3	chr18	+	259	2	ISM	ENSMUSG00000024273.9	ENSMUST00000234955.2	458	3	-11	2075	4	-2075	5prime_fragment	FALSE	canonical	3	181	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTCCAGGC	348	False	NA	NA	False	NA	NA	NA	24603914	24604254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24604038_24604118
ES.16203.4	chr18	+	2982	3	NIC	ENSMUSG00000024273.9	novel	1065	5	NA	NA	5	-39	intron_retention	FALSE	canonical	3	195	junction_1	6.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAGACAGTTTTTAT	349	False	NA	8	True	AATAAA	-18	NA	24603915	24610816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24606207_24608581_24608782_24610325
ES.16203.5	chr18	+	5277	3	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	-5	-33	intron_retention	FALSE	canonical	3	181	junction_1	13.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAGTTTTTATGATAAA	354	False	NA	14	True	AATAAA	-24	NA	24603920	24610822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24604038_24604118_24608782_24610325
ES.16203.6	chr18	+	3604	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	-4	-2535	-4	2535	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGTGTTTATTTAAAAA	355	False	NA	NA	False	AATAAA	-11	NA	24603921	24613390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ES.16203.7	chr18	+	1138	4	FSM	ENSMUSG00000024273.9	ENSMUST00000234559.2	1023	4	16	-131	-2	-10	multi-exon	FALSE	canonical	3	162	junction_1	19.3620476419435	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTGTACCGAATGGTA	357	False	NA	7	True	AATAAA	-38	NA	24603923	24610845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
ES.16203.8	chr18	+	994	4	NIC	ENSMUSG00000024273.9	novel	1146	5	NA	NA	9	-39	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAGACAGTTTTTAT	368	False	NA	8	True	AATAAA	-18	NA	24603934	24610816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
ES.16203.9	chr18	+	1069	5	FSM	ENSMUSG00000024273.9	ENSMUST00000235029.2	1146	5	38	39	19	-39	multi-exon	FALSE	canonical	2	8	junction_2	81.3910314469598	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAGACAGTTTTTAT	378	False	NA	8	True	AATAAA	-18	NA	24603944	24610816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24604038_24604118_24604204_24606006_24606207_24608581_24608782_24610325
ES.16204.1	chr18	+	174	1	Intergenic	novelGene_13526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAACAAAACCT	NA	False	NA	NA	False	NA	NA	NA	24626763	24626937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24626800_24626900
ES.16205.1	chr18	-	4353	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-52	-2	-52	2	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTGTGTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	24663313	24618014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.10	chr18	-	1385	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-37	330	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	90.8764579648926	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGTAGTACTATAGTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	24663298	24620676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.11	chr18	-	1345	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	119	2835	9	155	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATGTGAGACTGTTTA	NA	False	NA	NA	False	NA	NA	NA	24663142	24620851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.12	chr18	-	1336	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-27	2990	-27	0	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTTTGTAAGTT	NA	False	NA	NA	False	AATGAA	-17	NA	24663288	24621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.13	chr18	-	5695	1	Intergenic	novelGene_13527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTGGGCATGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	24637144	24631449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24631400_24637100
ES.16205.14	chr18	-	4599	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	14	18188	14	2279	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATGTGGTTTCTTTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	24663247	24636204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.15	chr18	-	3297	7	NNC	ENSMUSG00000040446.5	novel	2950	5	NA	NA	-9	2277	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	105.459971342475	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAAATGTGGTTTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	24663270	24636206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24638568_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.16	chr18	-	3262	7	NNC	ENSMUSG00000040446.5	novel	2950	5	NA	NA	-7	2272	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	105.114223585583	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTATGAAATGTGGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	24663158	24636211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24638650_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.18	chr18	-	2355	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-21	20467	-21	0	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCTCATGTTTTTGA	NA	False	NA	-1	True	AATAAA	-18	NA	24663282	24638483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.19	chr18	-	3033	6	NNC	ENSMUSG00000040446.5	novel	2950	5	NA	NA	-23	-1	intron_retention	FALSE	canonical	0	0	junction_5	115.76009675186	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTCTCATGTTTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	24663284	24638484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972_24663150_24663234
ES.16205.2	chr18	-	4032	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	90.8764579648926	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	24663285	24618016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.20	chr18	-	3112	5	FSM	ENSMUSG00000040446.5	ENSMUST00000234403.2	2950	5	-169	7	-23	-7	multi-exon	FALSE	canonical	3	215	junction_1	46.5886252211846	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTATTGTCTCATG	NA	False	NA	-8	True	AATAAA	-11	NA	24663284	24638490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.21	chr18	-	1205	6	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	56	21540	-54	-1073	5prime_fragment	FALSE	canonical	3	215	junction_1	43.046951111548	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTATTCTAGTAAATA	NA	False	NA	NA	False	AATAAA	-16	NA	24663205	24639556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.22	chr18	-	677	3	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-50	-4008	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	151.5	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTCGAAAAGATTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	24663311	24642491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24642700_24642849_24642980_24662972
ES.16205.23	chr18	-	1358	2	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-23	-13984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	24663284	24652467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24653514_24662972
ES.16205.24	chr18	-	4893	2	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-53	-19744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTGTCTTTTTATAG	NA	False	NA	NA	False	AATAAA	-29	NA	24663204	24658227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24662889_24662972
ES.16205.3	chr18	-	4176	9	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	126.714245450147	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	24663280	24618016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642550_24642700_24642849_24642980_24662972
ES.16205.4	chr18	-	4616	2	NNC	ENSMUSG00000040446.5	novel	1961	6	NA	NA	39910	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	24623205	24618018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24621773_24622343
ES.16205.5	chr18	-	2977	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	98.0229044454324	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	24663285	24618018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24619849_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.6	chr18	-	3885	5	NIC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	129.422515429117	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	24663152	24618018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24621389_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16205.8	chr18	-	5257	2	NNC	ENSMUSG00000040446.5	novel	1961	6	NA	NA	35835	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGAGTTTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	24627280	24618020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24621389_24625391
ES.16205.9	chr18	-	2335	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	-7	1971	-7	1019	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCACTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	24663268	24619987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ES.16206.1	chr18	+	205	1	Intergenic	novelGene_13528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9804	False	NA	NA	False	AAAAAG	-38	NA	24663711	24663916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24663700_24663900
ES.16207.1	chr18	-	6529	1	Intergenic	novelGene_13529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGTG	NA	False	NA	NA	False	NA	NA	NA	24671810	24665281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24665300_24671800
ES.16208.1	chr18	+	175	1	Intergenic	novelGene_13530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCCATGCGGT	NA	False	NA	NA	False	NA	NA	NA	24678699	24678874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24678700_24678900
ES.16209.1	chr18	-	187	1	Intergenic	novelGene_13531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAGGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	24679184	24678997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_24679000_24679200
ES.1621.1	chr1	-	1513	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	223	-1	-111	1	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTATTGTCTTAATCTTG	NA	False	NA	-15	True	AATAAA	-21	NA	153425568	153378759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
ES.1621.2	chr1	-	1107	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	330	298	-4	-298	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTAGGTGAATTTGA	NA	False	NA	NA	False	NA	NA	NA	153425461	153379058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
ES.1621.3	chr1	-	304	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTACCTATTTACCT	NA	False	NA	NA	False	TATAAA	-25	NA	153385459	153385155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153385200_153385500
ES.1621.4	chr1	-	247	2	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCAGGATGC	9689	False	NA	47	True	NA	NA	NA	153396842	153385211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153385424_153396807
ES.1621.5	chr1	-	199	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCTAAAGACAGTGACAG	NA	False	NA	-1	True	NA	NA	NA	153385458	153385259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153385300_153385500
ES.1621.6	chr1	-	197	2	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTCTAAAGACAGTGAC	9688	False	NA	-3	True	NA	NA	NA	153396843	153385261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153385430_153396814
ES.1621.7	chr1	-	176	2	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAAAAATCTTCTG	9688	False	NA	-23	True	NA	NA	NA	153396843	153385281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153385409_153396794
ES.1621.8	chr1	-	182	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCCACGCTAG	6305	False	NA	NA	False	NA	NA	NA	153401482	153401300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153401300_153401500
ES.16210.1	chr18	+	2054	1	FSM	ENSMUSG00002075893.1	ENSMUST00020182227.1	121	1	-1868	-65	-1868	65	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACTATCCATAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	24689790	24691844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24689800_24691800
ES.16211.1	chr18	+	174	1	Intergenic	novelGene_13532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGACAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	24694066	24694240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24694100_24694200
ES.16212.1	chr18	+	159	1	Intergenic	novelGene_13533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	24702286	24702445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24702300_24702400
ES.16213.1	chr18	+	3106	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	-335	695	-335	2	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24736682	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.11	chr18	+	2606	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	0	860	0	-163	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGATTGAGTTTCCCTG	NA	False	NA	15	True	AATAGA	-20	NA	24737017	24771704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.12	chr18	+	7322	19	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	743	junction_7	75.117295110323	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737017	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24767530_24767957_24768066_24771450
ES.16213.14	chr18	+	5336	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	2	intron_retention	FALSE	canonical	3	667	junction_5	85.8992869586238	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737017	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.15	chr18	+	2524	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_19	197.717782026908	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737018	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
ES.16213.16	chr18	+	2772	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	196.95717043085	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737018	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758642_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.17	chr18	+	7014	19	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	667	junction_5	85.7093314999764	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737018	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24767530_24767957_24768066_24771450
ES.16213.18	chr18	+	4213	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-12	intron_retention	FALSE	canonical	3	667	junction_5	86.7880176061189	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGCCCAACTTTGT	NA	False	NA	78	True	NA	NA	NA	24737019	24771855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24767530_24767957_24768066_24771450
ES.16213.19	chr18	+	4156	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-2	intron_retention	FALSE	canonical	2	4	junction_6	207.218995054405	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737019	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24767530_24767957_24768066_24771450
ES.16213.2	chr18	+	2725	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-89	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	201.829754991676	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTGTCTGATTTTGCC	NA	False	NA	89	True	TTTAAA	-9	NA	24736928	24771866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.20	chr18	+	2452	19	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_18	266.495824904177	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737019	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
ES.16213.21	chr18	+	2800	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	197.890862979557	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTTGTGTTATGACCA	NA	False	NA	NA	False	NA	NA	NA	24737019	24771914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752557_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.22	chr18	+	2407	19	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	212.720996195068	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24755166_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.23	chr18	+	2628	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-5	combination_of_known_splicesites	TRUE	canonical	1	4	junction_19	199.726287703947	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAACTTTGTCTGATTT	NA	False	NA	85	True	TTTAAA	-5	NA	24737019	24771862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767957_24768066_24771450
ES.16213.24	chr18	+	6864	18	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	2	intron_retention	FALSE	canonical	2	4	junction_6	217.672144818205	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737019	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748945_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.27	chr18	+	4106	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	667	junction_5	87.7707919034421	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737019	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.28	chr18	+	6705	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	667	junction_5	85.0105093714954	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTGTCTGATTTTGCC	NA	False	NA	89	True	TTTAAA	-9	NA	24737019	24771866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.29	chr18	+	2701	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	202.106723045029	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737020	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.3	chr18	+	4392	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-18	-12	intron_retention	FALSE	canonical	0	0	junction_2	261.232843722714	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGCCCAACTTTGT	NA	False	NA	78	True	NA	NA	NA	24736999	24771855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24741907_24742067_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24767530_24767957_24768066_24771450
ES.16213.30	chr18	+	4143	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	-10	intron_retention	FALSE	canonical	3	14	junction_2	204.41767843711	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCCCAACTTTGTCT	NA	False	NA	80	True	NA	NA	NA	24737020	24771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24767530_24767957_24768066_24771450
ES.16213.33	chr18	+	3894	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	-12	intron_retention	FALSE	canonical	2	4	junction_6	206.497154441033	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGCCCAACTTTGT	NA	False	NA	78	True	NA	NA	NA	24737020	24771855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.34	chr18	+	7062	18	NIC	ENSMUSG00000024271.9	novel	2497	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	667	junction_5	88.0033028634658	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737020	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.35	chr18	+	5431	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	667	junction_5	84.5380472949501	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737020	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24767530_24767957_24768066_24771450
ES.16213.37	chr18	+	2681	21	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.729129213168	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737020	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739916_24739989_24742686_24742758_24744969_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.38	chr18	+	2723	18	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	4	7217	2	468	5prime_fragment	FALSE	canonical	3	667	junction_5	77.0626402287849	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGATGTAGGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	24737021	24765347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415
ES.16213.39	chr18	+	2690	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	199.323581143828	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACTTTGTCTGATTTT	NA	False	NA	86	True	TTTAAA	-6	NA	24737021	24771863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.41	chr18	+	4060	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	2	-12	intron_retention	FALSE	canonical	2	4	junction_6	206.889200477546	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGCCCAACTTTGT	NA	False	NA	78	True	NA	NA	NA	24737021	24771855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748945_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.42	chr18	+	7646	15	NNC	ENSMUSG00000024271.9	novel	2497	19	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	316.693898757466	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737022	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24743171_24743263_24750389_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24767530_24767957_24768066_24771450
ES.16213.43	chr18	+	3973	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	3	2	intron_retention	FALSE	canonical	3	667	junction_5	84.0913788684667	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737022	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.44	chr18	+	2746	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	198.151766202019	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACTTTGTCTGATTTT	NA	False	NA	86	True	TTTAAA	-6	NA	24737023	24771863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758581_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.45	chr18	+	4907	17	NNC	ENSMUSG00000024271.9	novel	2497	19	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	298.135554058469	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737023	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765870_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.48	chr18	+	2704	22	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	197.430753669055	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737027	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765870_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.49	chr18	+	3880	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-11	-12	intron_retention	FALSE	canonical	3	14	junction_2	203.780542975258	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGCCCAACTTTGT	NA	False	NA	78	True	NA	NA	NA	24737030	24771855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.50	chr18	+	7983	19	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_8	212.129386326388	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737037	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749088_24750457_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24767530_24767957_24768066_24771450
ES.16213.51	chr18	+	4067	21	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_17	201.837923839897	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737038	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765870_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.52	chr18	+	4785	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-3	2	intron_retention	FALSE	canonical	3	667	junction_5	86.2824068951034	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737038	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.53	chr18	+	5540	19	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	-4	intron_retention	FALSE	canonical	3	667	junction_5	88.3696815502011	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACTTTGTCTGATTTT	NA	False	NA	86	True	TTTAAA	-6	NA	24737041	24771863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24767530_24767957_24768066_24771450
ES.16213.54	chr18	+	2548	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	201.853727981427	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTTGTCTGATTTTGC	NA	False	NA	88	True	TTTAAA	-8	NA	24737047	24771865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.55	chr18	+	5144	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	6	-160	intron_retention	FALSE	canonical	3	667	junction_5	85.8992869586238	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTGAGTTTCCCTGTCT	NA	False	NA	18	True	AATAGA	-23	NA	24737047	24771707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.57	chr18	+	2349	20	NNC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-5573	-159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	270.156792475732	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGAGTTTCCCTGTCTA	NA	False	NA	19	True	AATAGA	-24	NA	24742687	24771708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748223_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759184_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.59	chr18	+	2149	16	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	11198	697	-45	0	3prime_fragment	FALSE	canonical	3	722	junction_12	87.2901674493372	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	1567	False	NA	90	True	TTTAAA	-10	NA	24748215	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.6	chr18	+	4148	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-3	2	intron_retention	FALSE	canonical	3	667	junction_5	85.4559974489795	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGATTTTGCCTTA	NA	False	NA	92	True	TTTAAA	-12	NA	24737014	24771869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.60	chr18	+	3382	9	NIC	ENSMUSG00000024271.9	novel	2497	19	NA	NA	4106	12	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	293.37731677824	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTTATGTTGAGTCC	6488	False	NA	102	True	TTTAAA	-22	NA	24753136	24771879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
ES.16213.61	chr18	+	1199	8	ISM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	22161	0	-62	0	3prime_fragment	FALSE	canonical	3	722	junction_4	96.3649525586593	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24759180	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ES.16213.62	chr18	+	5247	2	NIC	ENSMUSG00000024271.9	novel	2497	19	NA	NA	3988	-5	intron_retention	FALSE	canonical	3	999	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAACTTTGTCTGATTT	NA	False	NA	85	True	TTTAAA	-5	NA	24763230	24771862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24768066_24771450
ES.16213.63	chr18	+	7007	1	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	4677	-941	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATAATCTTGAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	24763919	24770926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24763900_24770900
ES.16213.8	chr18	+	6543	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	667	junction_5	83.5019531345544	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737015	24771867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24765938_24767395_24767530_24767957_24768066_24771450
ES.16214.1	chr18	-	4475	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	391	-984	89	984	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGCTTAATTGTATAG	NA	False	NA	NA	False	ATTAAA	-22	NA	24736483	24711953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.10	chr18	-	3050	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-11	843	-11	-843	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTTGGAAATGTAA	NA	False	NA	NA	False	CATAAA	-23	NA	24736885	24713780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.11	chr18	-	3667	7	NNC	ENSMUSG00000024270.12	novel	529	3	NA	NA	2	-5680	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.6343311366378	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTCCTTCTTCAGCAT	NA	False	NA	NA	False	AATAAA	-23	NA	24736872	24721044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24722679_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.12	chr18	-	3797	6	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-11	8115	-11	-5688	5prime_fragment	FALSE	canonical	3	75	junction_1	9.72830920561225	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGTAACTGGTCCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	24736885	24721052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.13	chr18	-	5100	5	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	114	13100	114	3336	5prime_fragment	FALSE	canonical	3	91	junction_4	4.63680924774785	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTGGGGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	24736760	24726037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.14	chr18	-	7086	2	NIC	ENSMUSG00000024270.12	novel	3882	10	NA	NA	-1	1231	intron_retention	FALSE	canonical	3	91	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAGTAAGTGAGG	NA	False	NA	NA	False	NA	NA	NA	24736875	24728142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24734697_24736343
ES.16214.15	chr18	-	1451	2	ISM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-11	20850	-11	754	5prime_fragment	FALSE	canonical	3	91	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGGGAGCTTTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	24736885	24733787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_24734697_24736343
ES.16214.2	chr18	-	4022	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-5	-135	-5	135	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAGTGGAACATGCCAT	NA	False	NA	NA	False	NA	NA	NA	24736879	24712802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.3	chr18	-	3974	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-92	0	-92	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	0	True	ATTAAA	-18	NA	24736966	24712937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.5	chr18	-	3935	11	NNC	ENSMUSG00000024270.12	novel	3882	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.6913783244922	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTTGTTCTCTTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	24736867	24712939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733383_24733446_24733871_24734697_24736343
ES.16214.6	chr18	-	8521	7	NNC	ENSMUSG00000024270.12	novel	3882	10	NA	NA	46	-6	intron_retention	TRUE	canonical	0	0	junction_1	34.2766522415607	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCAGGCCTTGTTCTCTT	NA	False	NA	-6	True	ATTAAA	-12	NA	24736526	24712943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_24714460_24714643_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24734697_24736343
ES.16214.7	chr18	-	5070	9	NIC	ENSMUSG00000024270.12	novel	3882	10	NA	NA	15	-7	intron_retention	FALSE	canonical	3	75	junction_4	10.3923048454133	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCAGGCCTTGTTCTCT	NA	False	NA	-7	True	ATTAAA	-11	NA	24736557	24712944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_24714135_24715373_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.8	chr18	-	3699	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	-11	194	-11	-194	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAGACCTGTTCTGAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	24736885	24713131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16214.9	chr18	-	3141	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	307	434	5	-434	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATCTGCTTGTACATC	NA	False	NA	NA	False	NA	NA	NA	24736567	24713371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ES.16215.1	chr18	-	1395	1	Antisense	novelGene_ENSMUSG00000024271.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTGCAGAAGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	24753051	24751656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24751700_24753100
ES.16215.2	chr18	-	9729	7	Antisense	novelGene_ENSMUSG00000024271.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24765519	24751680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_24752234_24752436_24755290_24755530_24755725_24758568_24758635_24759180_24759274_24759443_24763384_24763489
ES.16216.1	chr18	+	2771	15	NNC	ENSMUSG00000039616.11	novel	2903	15	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6.21264346116129	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGCCTGCCATTATTG	NA	False	NA	13	True	ATTAAA	-13	NA	24786883	24834630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821988_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
ES.16216.2	chr18	+	2759	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	144	0	-43	0	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCTGCCATTATTGAG	NA	False	NA	15	True	ATTAAA	-15	NA	24786891	24834632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
ES.16216.3	chr18	+	5262	3	ISM	ENSMUSG00000039616.11	ENSMUST00000234253.2	2498	12	2608	22298	2608	-22298	internal_fragment	FALSE	canonical	3	18	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGCTGTTGGAAGAATC	NA	False	NA	NA	False	AATAAA	-19	NA	24789542	24800667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24793137_24797073_24797141_24799066
ES.16217.1	chr18	+	5110	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	-144	-10	-144	10	multi-exon	TRUE	canonical	3	28	junction_12	8.53414302799187	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATTCTCAGAGACAGA	NA	False	NA	NA	False	AATAAA	-26	NA	24842357	25266568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.10	chr18	+	1816	3	NNC	ENSMUSG00000034295.11	novel	2312	3	NA	NA	44	-51932	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24842545	24852661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24842831_24850926_24851647_24851850
ES.16217.11	chr18	+	4845	25	NNC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	69	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.7262169250026	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCATAAGAAATGTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	24842570	25266555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161160_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.12	chr18	+	172	1	Intergenic	novelGene_13534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACCCAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24858957	24859129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_24859000_24859100
ES.16217.13	chr18	+	4378	22	NNC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	103384	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.0043928210089	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCATAAGAAATGTTTAT	4424	False	NA	NA	False	AATAAA	-13	NA	24945885	25266555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_24945995_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.14	chr18	+	1680	5	NNC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	160368	146840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.9431082574917	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGCTGATGGATCT	NA	False	NA	NA	False	ATTAAA	-14	NA	25002869	25051433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25003151_25030693_25030762_25036949_25037056_25049238_25049304_25050273
ES.16217.15	chr18	+	4718	23	NNC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	160386	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.9206894117935	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	25002887	25266558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25003151_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.16	chr18	+	4186	19	ISM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	275767	2	-139149	-2	3prime_fragment	FALSE	canonical	3	28	junction_6	9.35991584851905	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATAAGAAATGTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	25118268	25266556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.17	chr18	+	4173	19	NIC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	-134390	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	16.7734541890482	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGAAATGTTTATTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	25123027	25266559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25123125_25127472_25127617_25134847_25135090_25153718_25153815_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.18	chr18	+	2706	8	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	-22762	-1	intron_retention	FALSE	canonical	3	48	junction_5	4.37525509460387	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAAGAAATGTTTATTC	337	False	NA	NA	False	AATAAA	-15	NA	25234655	25266557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25234742_25243111_25243295_25245602_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.19	chr18	+	3341	3	ISM	ENSMUSG00000034295.11	ENSMUST00000037097.9	5409	27	416298	-2413	1382	2413	3prime_fragment	FALSE	canonical	3	58	junction_2	1.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTACCTGTGTCATTGCT	NA	False	NA	NA	False	ATTAAA	-40	NA	25258799	25268971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_25258975_25263589_25263752_25265967
ES.16217.2	chr18	+	4855	24	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.8794028205205	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842497	25266558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.3	chr18	+	4899	24	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	12.1032108411531	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAAGAAATGTTTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	24842506	25266557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.4	chr18	+	5414	27	FSM	ENSMUSG00000034295.11	ENSMUST00000037097.9	5409	27	5	-10	5	10	multi-exon	FALSE	canonical	0	0	junction_11	16.7332005306815	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATTCTCAGAGACAGA	NA	False	NA	NA	False	AATAAA	-26	NA	24842506	25266568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25153718_25153815_25155678_25156036_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.5	chr18	+	5046	26	NIC	ENSMUSG00000034295.11	novel	5409	27	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	14.6410928553848	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAAGAAATGTTTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	24842506	25266557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25153718_25153815_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ES.16217.9	chr18	+	2008	4	ISM	ENSMUSG00000034295.11	ENSMUST00000037097.9	5409	27	39	234319	39	127646	5prime_fragment	FALSE	canonical	3	46	junction_1	3.68178700572909	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAGAAAGAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-13	NA	24842540	25032239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693
ES.16218.1	chr18	+	1794	1	Antisense	novelGene_ENSMUSG00000024269.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25269178	25270972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_25269200_25271000
ES.16219.1	chr18	+	4778	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	-229	802	-208	-797	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTTATGGCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	25301847	25599576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.10	chr18	+	4682	10	NIC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	14.8930342487957	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAATAATTTTTT	NA	False	NA	12	True	AATAAA	-21	NA	25302074	25600378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.11	chr18	+	1527	6	NNC	ENSMUSG00000033632.17	novel	1427	6	NA	NA	0	5843	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.2171105231981	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAAACTTCATATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	25302076	25328133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308547_25314441_25314558_25315081_25315207_25327097
ES.16219.12	chr18	+	4342	10	NIC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	1	-821	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	14.2204860051344	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCCATGTGGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	25302077	25599552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25553023_25553133_25596673
ES.16219.13	chr18	+	5366	11	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.2529242056235	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTACAGTGTAATAA	NA	False	NA	6	True	AATAAA	-15	NA	25302078	25600372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307720_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.14	chr18	+	3471	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	2	1878	-1	1351	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGTGTTGTTGTAGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	25302078	25598500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.15	chr18	+	5566	12	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	0	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	17.48293146363	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTCTTACAGTGTA	NA	False	NA	2	True	AATAAA	-11	NA	25302079	25600368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25554536_25554591_25596673
ES.16219.16	chr18	+	5518	11	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.4703377834411	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACAGTGTAATAATTTT	NA	False	NA	10	True	AATAAA	-19	NA	25302081	25600376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.17	chr18	+	5506	12	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.2165103092981	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTACAGTGTAATAA	NA	False	NA	6	True	AATAAA	-15	NA	25302081	25600372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25450531_25450698_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.18	chr18	+	5233	11	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	2	14585	intron_retention	FALSE	canonical	0	0	junction_10	14.053113534018	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATTTATATATGGA	NA	False	NA	NA	False	AAGAAA	-10	NA	25302081	25614963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25611371
ES.16219.19	chr18	+	5381	12	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.2368828177198	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCTTACAGTGTAATA	NA	False	NA	5	True	AATAAA	-14	NA	25302093	25600371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25554536_25554591_25596673
ES.16219.2	chr18	+	5566	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	-214	-1	-193	1	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGTAATAATTTTTTT	NA	False	NA	13	True	AATAAA	-22	NA	25301862	25600379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.20	chr18	+	4274	8	NNC	ENSMUSG00000033632.17	novel	1582	9	NA	NA	95	-821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5126776236822	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCCATGTGGCAAGTC	NA	False	NA	NA	False	NA	NA	NA	25302174	25599552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25596673
ES.16219.21	chr18	+	5533	11	NNC	ENSMUSG00000033632.17	novel	1582	9	NA	NA	97	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8744747806435	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTACAGTGTAATAA	NA	False	NA	6	True	AATAAA	-15	NA	25302176	25600372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25307627_25307780_25308399_25308543_25315111_25315207_25336919_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.22	chr18	+	5351	10	NNC	ENSMUSG00000033632.17	novel	1582	9	NA	NA	129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6822516207825	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTACAGTGTAATAA	NA	False	NA	6	True	AATAAA	-15	NA	25302208	25600372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.23	chr18	+	2063	4	NNC	ENSMUSG00000033632.17	novel	1582	9	NA	NA	137	16351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2968437932844	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGCTTTATGTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	25302216	25338641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302318_25308399_25308543_25315111_25315207_25336917
ES.16219.24	chr18	+	2785	1	Intergenic	novelGene_13536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25400362	25403147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_25400400_25403100
ES.16219.25	chr18	+	4175	1	Intergenic	novelGene_13537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25528676	25532851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_25528700_25532900
ES.16219.26	chr18	+	6019	1	NIC	ENSMUSG00000033632.17	novel	5257	10	NA	NA	225515	1356	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTGTAGAGTATTG	NA	False	NA	NA	False	ATTAAA	-17	NA	25592486	25598505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25592500_25598500
ES.16219.27	chr18	+	5180	1	NIC	ENSMUSG00000033632.17	novel	5351	12	NA	NA	228227	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAATAATTTTTT	NA	False	NA	12	True	AATAAA	-21	NA	25595198	25600378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25595200_25600400
ES.16219.3	chr18	+	1612	6	NNC	ENSMUSG00000033632.17	novel	1427	6	NA	NA	-5	16351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.5083764820148	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGCTTTATGTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	25302050	25338641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25337512
ES.16219.4	chr18	+	4553	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-6	82842	0	18833	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGATCATGTGGGT	NA	False	NA	NA	False	NA	NA	NA	25302070	25341123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
ES.16219.5	chr18	+	3751	9	NIC	ENSMUSG00000033632.17	novel	5257	10	NA	NA	2	-829	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	15.5478093312209	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAAGACTGGCCATGT	NA	False	NA	NA	False	NA	NA	NA	25302072	25599544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25532982_25533165_25553023_25553133_25596673
ES.16219.6	chr18	+	4410	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	-4	945	2	-940	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGTTGTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	25302072	25599433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ES.16219.7	chr18	+	2068	5	ISM	ENSMUSG00000033632.17	ENSMUST00000162149.2	1427	6	-3	85324	3	16351	5prime_fragment	FALSE	canonical	3	40	junction_3	4.32290411644765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGGCTTTATGTTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	25302073	25338641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917
ES.16219.8	chr18	+	5502	12	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.2368828177198	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTCTTACAGTGTA	NA	False	NA	2	True	AATAAA	-11	NA	25302073	25600368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25586544_25586703_25596673
ES.16219.9	chr18	+	3619	12	NNC	ENSMUSG00000033632.17	novel	5351	11	NA	NA	3	1354	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.2371884160447	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTTGTTGTAGAGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	25302073	25598503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337031_25422993_25423124_25472770_25473442_25477920_25478020_25524019_25524161_25532982_25533165_25553023_25553133_25596673
ES.1622.1	chr1	-	1723	2	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGAGCAGGTAGCCTG	NA	False	NA	NA	False	NA	NA	NA	153731239	153728629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153730303_153731189
ES.16220.1	chr18	-	182	1	Intergenic	novelGene_13535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACTAGGCA	NA	False	NA	NA	False	NA	NA	NA	25099387	25099205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_25099200_25099400
ES.16221.1	chr18	-	5772	1	Antisense	novelGene_ENSMUSG00000034295.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCACACACACACACACA	7775	False	NA	NA	False	NA	NA	NA	25157992	25152220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_25152200_25158000
ES.16222.1	chr18	-	4501	1	Genic_Genomic	ENSMUSG00000024269.12	novel	NA	NA	NA	NA	37163	192	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTACTTCAGGTGTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	25264588	25260087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_25260100_25264600
ES.16223.1	chr18	-	4495	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	282	-618	-31	618	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAATTGTCAGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	25301782	25268475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.10	chr18	-	2157	8	NNC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	132	-2576	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	116.647734129519	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGTATCGACTAGT	NA	False	NA	-7	True	AATAAA	-19	NA	25301932	25271669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25272197_25273502_25273664_25274577_25274695_25281344_25282051_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.11	chr18	-	2071	7	NNC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	24	-2577	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	97.0751427160081	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCATCAGTATCGACTAG	NA	False	NA	-8	True	AATAAA	-18	NA	25301727	25271670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25272197_25273502_25273664_25274577_25274695_25281344_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.12	chr18	-	1171	6	NIC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	6	-2581	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	108.691490007268	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAAGCATCAGTATCGA	NA	False	NA	-12	True	AATAAA	-14	NA	25301745	25271674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25291300_25291381_25301583
ES.16223.13	chr18	-	1138	7	NNC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	3972	-2581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	98.8511788273441	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAAGCATCAGTATCGA	NA	False	NA	-12	True	AATAAA	-14	NA	25297779	25271674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25297738
ES.16223.2	chr18	-	4109	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	69	-19	69	19	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGCCTTTCATCAC	NA	False	NA	NA	False	AATAAA	-41	NA	25301995	25269074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.3	chr18	-	5463	3	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	25282	6	24969	-6	3prime_fragment	FALSE	canonical	3	247	junction_2	23	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATCAGGTATCTTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	25276782	25269099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25272197_25273502_25273664_25274577
ES.16223.4	chr18	-	3746	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	320	93	7	-93	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCAGCCCCGTGCATGC	NA	False	NA	NA	False	AATAAA	-17	NA	25301744	25269186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.5	chr18	-	2666	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	62	1431	62	-1431	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTCTGGATATCTTT	NA	False	NA	NA	False	TTTAAA	-27	NA	25302002	25270524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.6	chr18	-	2295	6	NIC	ENSMUSG00000024269.12	novel	4159	7	NA	NA	-24	-1487	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	108.691490007268	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGTTGTGAAAATGTT	NA	False	NA	NA	False	AATAAA	-37	NA	25301775	25270580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25291300_25291381_25301583
ES.16223.7	chr18	-	1647	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	329	2183	16	-2183	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTCCAGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	25301735	25271276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16223.8	chr18	-	1846	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	-249	2562	-249	-2562	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTTATGTGACCATCTC	NA	False	NA	7	True	AATAAA	-33	NA	25302313	25271655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ES.16224.1	chr18	-	3274	11	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3823	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6858889263932	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGTCCTTATTGC	NA	False	NA	NA	False	AATAAA	-27	NA	25638119	25610671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.10	chr18	-	2155	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248913	-415	-3831	-195	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATAGAAGTTAGCATTA	NA	False	NA	NA	False	NA	NA	NA	25638127	25611719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.11	chr18	-	2192	10	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3870	-195	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.2497379429012	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATAGAAGTTAGCATTA	NA	False	NA	NA	False	NA	NA	NA	25638166	25611719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.12	chr18	-	2169	10	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	248959	1031	-3785	-195	3prime_fragment	FALSE	canonical	3	7	junction_2	9.7410927974683	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATAGAAGTTAGCATTA	NA	False	NA	NA	False	NA	NA	NA	25638081	25611719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.13	chr18	-	8364	1	FSM	ENSMUSG00000024268.17	ENSMUST00000224028.2	1699	1	-3910	-2755	-130	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATAGAAGTTAGCATT	NA	False	NA	NA	False	NA	NA	NA	25620084	25611720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_25611700_25620100
ES.16224.16	chr18	-	1892	9	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3685	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.9457654863403	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAATTAGAGGA	NA	False	NA	NA	False	TTTAAA	-30	NA	25637981	25611773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25624197_25624282_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637527_25637626_25637946
ES.16224.17	chr18	-	1783	11	NNC	ENSMUSG00000024268.17	novel	2626	13	NA	NA	-3832	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6858889263932	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	25638128	25612171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.18	chr18	-	1736	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248880	37	-3864	0	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	25638160	25612171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.19	chr18	-	1042	6	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248912	18115	-3832	7027	internal_fragment	FALSE	canonical	3	20	junction_1	5.17687164221791	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCATCCCACTGATTG	NA	False	NA	NA	False	AGTAAA	-20	NA	25638128	25630249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.2	chr18	-	3212	10	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3822	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.2565175405668	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGTCCTTATTGC	NA	False	NA	NA	False	AATAAA	-27	NA	25638118	25610671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637527_25637626_25637946
ES.16224.3	chr18	-	3203	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248913	-1463	-3831	17	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGTCCTTATTGC	NA	False	NA	NA	False	AATAAA	-27	NA	25638127	25610671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.4	chr18	-	3151	11	NNC	ENSMUSG00000024268.17	novel	2492	13	NA	NA	-3558	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.2429571591181	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGTCCTTATTGC	NA	False	NA	NA	False	AATAAA	-27	NA	25637854	25610671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637804
ES.16224.6	chr18	-	3047	10	NNC	ENSMUSG00000024268.17	novel	3995	13	NA	NA	-3550	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	11.5992762652048	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAAAAACCT	NA	False	NA	NA	False	AATAAA	-10	NA	25637846	25610688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637804
ES.16224.8	chr18	-	3285	10	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	248874	0	-3870	0	3prime_fragment	FALSE	canonical	3	7	junction_2	9.7410927974683	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAAAAACCT	NA	False	NA	NA	False	AATAAA	-10	NA	25638166	25610688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16224.9	chr18	-	2151	10	NNC	ENSMUSG00000024268.17	novel	2899	13	NA	NA	-3829	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.6950923894494	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATAGAAGTTAGCATTA	NA	False	NA	NA	False	NA	NA	NA	25638125	25611719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_25612769_25619850_25620023_25620296_25620376_25629278_25629363_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
ES.16225.1	chr18	+	1271	5	Antisense	novelGene_ENSMUSG00000024268.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTGTTTCATGCTTCT	NA	False	NA	NA	False	GATAAA	-32	NA	25642015	25726312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_25642110_25644715_25644831_25719165_25719236_25719451_25719578_25725446
ES.16226.1	chr18	-	177	1	Intergenic	novelGene_13538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGCAAGCGGAGTT	9546	False	NA	NA	False	NA	NA	NA	25670134	25669957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_25670000_25670100
ES.16227.1	chr18	-	138	1	Intergenic	novelGene_13539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	26142477	26142339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_26142300_26142500
ES.16228.1	chr18	-	176	1	Intergenic	novelGene_13540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAACATGGA	NA	False	NA	NA	False	NA	NA	NA	27809214	27809038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_27809000_27809200
ES.16229.1	chr18	-	141	1	Intergenic	novelGene_13541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	28592218	28592077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_28592100_28592200
ES.1623.1	chr1	+	198	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	865	False	NA	NA	False	NA	NA	NA	153741402	153741600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153741400_153741600
ES.16230.1	chr18	-	5175	1	Intergenic	novelGene_13542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	29098518	29093343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_29093300_29098500
ES.16231.1	chr18	+	176	1	Intergenic	novelGene_13543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAACTAA	NA	False	NA	NA	False	NA	NA	NA	30169803	30169979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_30169800_30170000
ES.16232.1	chr18	+	177	1	Intergenic	novelGene_13544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTACACTGAGAA	NA	False	NA	NA	False	NA	NA	NA	30347217	30347394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_30347200_30347400
ES.16233.1	chr18	+	10988	24	NNC	ENSMUSG00000033628.16	novel	3144	25	NA	NA	51	0	intron_retention	FALSE	canonical	0	0	junction_13	36.8285764776297	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATGCCTTGTTTTC	NA	False	NA	6	True	AGTAAA	-17	NA	30405850	30481173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444250_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30477130_30480775
ES.16233.12	chr18	+	3126	26	NNC	ENSMUSG00000033628.16	novel	3257	25	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.4884883986858	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATATGCCTTGTTTT	NA	False	NA	5	True	AGTAAA	-16	NA	30405983	30481172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30419086_30419147_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16233.2	chr18	+	3195	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	61	1	61	-1	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCCTTGTTTTCCCTGT	NA	False	NA	11	True	AGTAAA	-22	NA	30405860	30481178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16233.3	chr18	+	3000	24	NIC	ENSMUSG00000033628.16	novel	3257	25	NA	NA	-19	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	36.6542110940377	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTCATATGCCTTGTT	NA	False	NA	3	True	AGTAAA	-14	NA	30405903	30481170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_30406072_30407321_30407511_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16233.5	chr18	+	3257	26	NNC	ENSMUSG00000033628.16	novel	3257	25	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.3709093889228	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGCCTTGTTTTCCCT	NA	False	NA	9	True	AGTAAA	-20	NA	30405930	30481176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435196_30435331_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16233.6	chr18	+	3100	25	NNC	ENSMUSG00000033628.16	novel	3257	25	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	35.9571504247301	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATATGCCTTGTTTT	NA	False	NA	5	True	AGTAAA	-16	NA	30405942	30481172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445715_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16233.7	chr18	+	3072	25	NNC	ENSMUSG00000033628.16	novel	3257	25	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.0878317057457	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATATGCCTTGTTTT	NA	False	NA	5	True	AGTAAA	-16	NA	30405953	30481172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435996_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ES.16234.1	chr18	-	351	1	Intergenic	novelGene_13545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAACAAACAAAAAAAAAA	2899	False	NA	NA	False	NA	NA	NA	30417209	30416858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30416900_30417200
ES.16235.1	chr18	-	272	1	Intergenic	novelGene_13546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGATCTTTAGCCCTC	NA	False	NA	NA	False	NA	NA	NA	30428546	30428274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30428300_30428500
ES.16235.2	chr18	-	158	1	Intergenic	novelGene_13547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	30428546	30428388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30428400_30428500
ES.16236.1	chr18	-	1627	1	Antisense	novelGene_ENSMUSG00000033628.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTTAGTTTATCAGTCC	NA	False	NA	NA	False	NA	NA	NA	30439067	30437440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_30437400_30439100
ES.16237.1	chr18	+	3713	5	Intergenic	novelGene_13548	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGTGAAGATTACGC	NA	False	NA	NA	False	AATAAA	-17	NA	30642668	30672118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_30642818_30649127_30649260_30652132_30652195_30664748_30664816_30668815
ES.16237.2	chr18	+	3655	7	Intergenic	novelGene_13549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.06718737290547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAAGATTACGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	30642668	30672121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_30642818_30643342_30643389_30649127_30649260_30652132_30652195_30664748_30664816_30668815_30669031_30669137
ES.16238.1	chr18	-	159	1	Intergenic	novelGene_13550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	30723945	30723786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30723800_30723900
ES.16239.1	chr18	-	1966	1	Intergenic	novelGene_13551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCAAGGACCAAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	30769941	30767975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30768000_30769900
ES.1624.1	chr1	-	177	1	Antisense	novelGene_ENSMUSG00000043282.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATTAGGTA	NA	False	NA	NA	False	NA	NA	NA	153752274	153752097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_153752100_153752300
ES.16240.1	chr18	-	1067	1	Intergenic	novelGene_13552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	AATAAA	-35	NA	30806234	30805167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_30805200_30806200
ES.16241.1	chr18	+	226	1	Intergenic	novelGene_13553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTTTAGACTCTC	NA	False	NA	NA	False	NA	NA	NA	30829389	30829615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_30829400_30829600
ES.16242.1	chr18	-	241	1	Intergenic	novelGene_13554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACTATTAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	31250529	31250288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_31250300_31250500
ES.16243.1	chr18	+	177	1	Intergenic	novelGene_13555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCACAAAC	NA	False	NA	NA	False	NA	NA	NA	31509891	31510068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31509900_31510100
ES.16244.1	chr18	+	180	1	Intergenic	novelGene_13556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31659329	31659509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31659300_31659500
ES.16245.1	chr18	+	3823	1	Antisense	novelGene_ENSMUSG00000024259.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTCAAAGTTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	31736782	31740605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_31736800_31740600
ES.16246.1	chr18	+	1273	1	FSM	ENSMUSG00000092124.2	ENSMUST00000164667.2	1240	1	-24	-9	-24	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCGGCCCAGAAGCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	31742540	31743813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31742500_31743800
ES.16247.1	chr18	-	4380	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-2	-7	-2	7	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTTTCTCTTATTG	NA	False	NA	NA	False	GATAAA	-19	NA	31742957	31713213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.10	chr18	-	2839	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	9	-1422	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742946	31714642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.11	chr18	-	5372	7	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	8	-1422	intron_retention	FALSE	canonical	0	0	junction_1	75.3937810580039	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742947	31714642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727601_31727688_31730091_31730149_31733184_31733286_31735636_31735854_31738805_31738864_31740274
ES.16247.12	chr18	-	2213	4	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	0	-1422	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.973498871121	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742955	31714642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31715207_31737631_31738864_31740274_31740318_31742581
ES.16247.13	chr18	-	5999	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	-6	-1423	intron_retention	FALSE	canonical	3	132	junction_6	30.2930134959642	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGTATTTTATGGTTA	NA	False	NA	-19	True	AATAAA	-13	NA	31742970	31714643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31716823_31727629_31727688_31730091_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.14	chr18	-	2922	8	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	9	-1424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.8858400585925	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGTATTTTATGGTT	NA	False	NA	-20	True	AATAAA	-12	NA	31742946	31714644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735636_31735699_31738805_31738864_31740274_31740318_31742581
ES.16247.15	chr18	-	2905	8	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	7	-1424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.5603521650639	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGTATTTTATGGTT	NA	False	NA	-20	True	AATAAA	-12	NA	31742948	31714644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730114_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.16	chr18	-	2888	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	2	-1424	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.4807494879791	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGTATTTTATGGTT	NA	False	NA	-20	True	AATAAA	-12	NA	31742953	31714644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31716823_31727629_31727688_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.17	chr18	-	2650	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	2	1719	2	-1719	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATGCAGCAGTTAGCAT	NA	False	NA	0	True	AATAAA	-22	NA	31742953	31714939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.18	chr18	-	2349	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-26	2048	-17	-2048	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTTTCCTTTTTTT	NA	False	NA	0	True	CATAAA	-18	NA	31742981	31715268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.2	chr18	-	3990	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-15	396	-6	-396	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCCGGTTGTCCGAGT	NA	False	NA	NA	False	NA	NA	NA	31742970	31713616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.20	chr18	-	2220	7	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	3	-2051	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_6	79.8366387624685	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTCCTTTT	NA	False	NA	-3	True	CATAAA	-15	NA	31742961	31715271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740313_31742581
ES.16247.21	chr18	-	1587	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	7	2777	7	-2777	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAAAGTTACATTTT	NA	False	NA	NA	False	NA	NA	NA	31742948	31715997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.22	chr18	-	4893	1	NIC	ENSMUSG00000024259.10	novel	1823	10	NA	NA	2	-24840	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCCCATTGAGAGATC	NA	False	NA	NA	False	AAAACA	-22	NA	31742953	31738060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31738100_31743000
ES.16247.3	chr18	-	3181	6	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	20	-991	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	75.0333259292163	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTTTTTTTAAATTT	NA	False	NA	0	True	AATAAA	-25	NA	31742935	31714211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31738805_31738864_31740274_31740318_31742581
ES.16247.4	chr18	-	3398	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-20	993	-11	-993	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTTTTTTTTTAAAT	NA	False	NA	-2	True	AATAAA	-23	NA	31742975	31714213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.5	chr18	-	3274	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	2	-994	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTTTTTTTTTTAAA	NA	False	NA	-3	True	AATAAA	-22	NA	31742953	31714214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.6	chr18	-	2999	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-34	1406	-25	-1406	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTCTTAACGTGTTTT	NA	False	NA	-2	True	AATAAA	-30	NA	31742989	31714626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.7	chr18	-	3130	8	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	-26	-1415	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.0017006561702	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGGTTAATCTCTTA	NA	False	NA	-11	True	AATAAA	-21	NA	31742990	31714635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735636_31735854_31738805_31738864_31740274_31740318_31742581
ES.16247.8	chr18	-	2905	9	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	0	-1421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	59.6697944943671	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742964	31714641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581_31742616_31742669
ES.16247.9	chr18	-	6021	7	NNC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	19	-1422	intron_retention	FALSE	canonical	3	12	junction_4	64.7816846544351	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATTTTATGGTTAA	NA	False	NA	-18	True	AATAAA	-14	NA	31742936	31714642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735636_31738864_31740274_31740318_31742581
ES.16248.1	chr18	+	4302	22	NNC	ENSMUSG00000024260.15	novel	4015	21	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.16826456366	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	6764	False	NA	9	True	AATAAA	-21	NA	31767382	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31815828_31816062_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.10	chr18	+	3922	20	NNC	ENSMUSG00000024260.15	novel	4015	21	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	46.1975164518158	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	6798	False	NA	9	True	AATAAA	-21	NA	31767416	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31786542_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.11	chr18	+	4155	22	NNC	ENSMUSG00000024260.15	novel	4030	21	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6879832340166	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	6802	False	NA	9	True	AATAAA	-21	NA	31767420	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31767543_31768262_31768384_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.13	chr18	+	7640	20	NIC	ENSMUSG00000024260.15	novel	4030	21	NA	NA	-1	3	intron_retention	FALSE	canonical	3	64	junction_13	32.3278736192528	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCAGTTTGCCTCTTTC	6804	False	NA	11	True	AATAAA	-23	NA	31767422	31856117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31848498_31853709_31853824_31855224
ES.16248.14	chr18	+	3695	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-12	332	0	-332	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTTCTCCTGTTTGACT	6805	False	NA	NA	False	CATAAA	-17	NA	31767423	31855782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.15	chr18	+	4007	21	NNC	ENSMUSG00000024260.15	novel	4030	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_18	45.9528018732264	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	6806	False	NA	9	True	AATAAA	-21	NA	31767424	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844765_31848393_31848498_31853709_31853824_31855224
ES.16248.16	chr18	+	3821	21	NNC	ENSMUSG00000024260.15	novel	4015	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.5856062809304	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGAGCAGTTTGCCTC	6806	False	NA	7	True	AATAAA	-19	NA	31767424	31856113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31767543_31769034_31769153_31780093_31780213_31781273_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.17	chr18	+	3144	15	ISM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	2	32601	2	-22554	5prime_fragment	FALSE	canonical	3	64	junction_13	35.7483409062717	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTATTAAATTTTAT	6807	False	NA	NA	False	NA	NA	NA	31767425	31823513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450
ES.16248.18	chr18	+	3068	16	ISM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-6	23651	-2	-13604	5prime_fragment	FALSE	canonical	3	84	junction_13	31.4413740157774	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCATTTTGCTGCCT	6811	False	NA	NA	False	NA	NA	NA	31767429	31832463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574
ES.16248.22	chr18	+	3976	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	-15	6	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	41.2439086411557	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTGCCTCTTTCTAA	7504	False	NA	14	True	AATAAA	-26	NA	31768122	31856120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.23	chr18	+	4072	22	NNC	ENSMUSG00000024260.15	novel	400	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.9077305461953	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	7524	False	NA	9	True	AATAAA	-21	NA	31768142	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31768185_31769034_31769153_31776715_31776837_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.25	chr18	+	4120	21	NNC	ENSMUSG00000024260.15	novel	400	3	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.6869259618939	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	7555	False	NA	10	True	AATAAA	-22	NA	31768173	31856116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31768384_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.26	chr18	+	4340	21	NIC	ENSMUSG00000024260.15	novel	561	3	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	44.5248245364314	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	7557	False	NA	9	True	AATAAA	-21	NA	31768175	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31768607_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.28	chr18	+	3914	20	NNC	ENSMUSG00000024260.15	novel	4015	21	NA	NA	802	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.7836051895777	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	8415	False	NA	10	True	AATAAA	-22	NA	31769033	31856116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31769153_31780093_31780330_31781186_31781346_31782594_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.29	chr18	+	5111	2	NNC	ENSMUSG00000024260.15	novel	400	3	NA	NA	11471	-3020	intron_retention	TRUE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAATCTGCGC	2217	False	NA	NA	False	NA	NA	NA	31779702	31843047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31784764_31842997
ES.16248.30	chr18	+	3280	9	ISM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	45147	-1	44339	1	3prime_fragment	FALSE	canonical	3	64	junction_1	37.7946755509291	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	8468	False	NA	9	True	AATAAA	-21	NA	31812570	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.31	chr18	+	177	1	Intergenic	novelGene_13557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAATCTGCGCCA	NA	False	NA	NA	False	NA	NA	NA	31842872	31843049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31842900_31843000
ES.16248.32	chr18	+	1682	2	ISM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	85597	-1	84801	1	3prime_fragment	FALSE	canonical	3	179	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	NA	False	NA	9	True	AATAAA	-21	NA	31853032	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31853824_31855224
ES.16248.6	chr18	+	4055	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	-33	-7	-21	7	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGCCTCTTTCTAAC	6784	False	NA	15	True	AATAAA	-27	NA	31767402	31856121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.7	chr18	+	3944	20	NIC	ENSMUSG00000024260.15	novel	4015	21	NA	NA	-21	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	46.4440806947338	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	6784	False	NA	9	True	AATAAA	-21	NA	31767402	31856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16248.8	chr18	+	1891	12	ISM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	-17	45312	-17	30474	5prime_fragment	FALSE	canonical	3	116	junction_5	28.8610235037836	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGTTTTAAGTCTTGT	6788	False	NA	NA	False	AATAAA	-13	NA	31767406	31810802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408
ES.16248.9	chr18	+	3692	18	NIC	ENSMUSG00000024260.15	novel	4030	21	NA	NA	-12	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	51.2778576494875	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGATGAGCAGTTT	6793	False	NA	2	True	AATAAA	-14	NA	31767411	31856108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ES.16249.1	chr18	+	179	1	Intergenic	novelGene_13558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	31873789	31873968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31873800_31874000
ES.1625.1	chr1	-	1776	2	Genic_Genomic	ENSMUSG00000045968.8	novel	3121	1	NA	NA	480	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTATGTCTGTCCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	153775474	153772854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_153774497_153775340
ES.16250.1	chr18	-	320	1	Intergenic	novelGene_13559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	31885507	31885187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_31885200_31885500
ES.16250.2	chr18	-	200	1	Intergenic	novelGene_13560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGAGTGAGTGGAGCT	NA	False	NA	NA	False	AATAAA	-10	NA	31885507	31885307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_31885300_31885500
ES.16251.1	chr18	+	5009	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-286	-1338	-232	1338	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCCTCTGTGTGACC	6635	False	NA	13	True	AATAAA	-20	NA	31892646	31917134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.10	chr18	+	4204	8	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.5183195042807	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATGGT	6869	False	NA	NA	False	TTTAAA	-10	NA	31892880	31915780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909914_31911909_31912007_31913696
ES.16251.12	chr18	+	2969	10	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	9	1025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.0619766124134	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTGGGTGTTAATT	6876	False	NA	1	True	AATAAA	-11	NA	31892887	31916821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696_31914982_31916595
ES.16251.13	chr18	+	4655	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	11	1338	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCCTCTGTGTGACC	6878	False	NA	13	True	AATAAA	-20	NA	31892889	31917134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.14	chr18	+	7450	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	44	1330	intron_retention	FALSE	canonical	3	74	junction_2	12.9967944765879	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTCTTCTGCCTCT	6965	False	NA	5	True	AATAAA	-12	NA	31892976	31917126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31912007_31913696
ES.16251.15	chr18	+	4692	8	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	45	1335	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	46.4722871116513	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6966	False	NA	10	True	AATAAA	-17	NA	31892977	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
ES.16251.16	chr18	+	4477	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	48	-1140	48	1140	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTGTGTTTTTTT	6969	False	NA	NA	False	NA	NA	NA	31892980	31916936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.17	chr18	+	6604	10	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	54	1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.1574064366316	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTCTTCTGCCTCT	6975	False	NA	5	True	AATAAA	-12	NA	31892986	31917126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909043_31909131_31909842_31911662_31911909_31912007_31913094_31913223_31913696
ES.16251.18	chr18	+	4412	8	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	54	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.5206238267467	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	6975	False	NA	5	True	AATAAA	-15	NA	31892986	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907857_31909039_31909131_31911909_31912007_31913696
ES.16251.19	chr18	+	4806	9	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	55	1335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.7122140763678	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6976	False	NA	10	True	AATAAA	-17	NA	31892987	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31906013_31906155_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.2	chr18	+	4488	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-74	-1029	-20	1029	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	6847	False	NA	5	True	AATAAA	-15	NA	31892858	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.20	chr18	+	4730	9	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	61	1335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.4424242356631	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6982	False	NA	10	True	AATAAA	-17	NA	31892993	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31909842_31909914_31911909_31912007_31913696
ES.16251.21	chr18	+	2319	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	65	-889	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCTACCATACTGGG	6986	False	NA	3	True	AATAAA	-16	NA	31892997	31914906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.22	chr18	+	12361	4	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	79	1029	intron_retention	FALSE	non_canonical	0	0	junction_3	37.7447568102732	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	7000	False	NA	5	True	AATAAA	-15	NA	31893011	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31908450_31908538
ES.16251.23	chr18	+	1983	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	79	-877	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	35.8174383351028	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGGACTCCTCACTTC	7000	False	NA	15	True	AATAAA	-28	NA	31893011	31914918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31894832_31894944_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.25	chr18	+	8559	7	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	79	1328	intron_retention	FALSE	non_canonical	0	0	junction_5	37.1008385649465	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAACTGTCTTCTGCCT	7000	False	NA	3	True	AATAAA	-10	NA	31893011	31917124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31908450_31908538_31912007_31913696
ES.16251.26	chr18	+	7054	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	139	1029	intron_retention	FALSE	canonical	3	74	junction_2	12.9967944765879	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	7060	False	NA	5	True	AATAAA	-15	NA	31893071	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31912007_31913696
ES.16251.27	chr18	+	5026	8	NNC	ENSMUSG00000041915.10	novel	3181	8	NA	NA	347	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5717154320045	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	7268	False	NA	5	True	AATAAA	-15	NA	31893279	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31894207_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.28	chr18	+	4241	7	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	9973	1335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.9458908389932	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	NA	False	NA	10	True	AATAAA	-17	NA	31904829	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31912948_31913003_31913696
ES.16251.29	chr18	+	4876	3	ISM	ENSMUSG00000041915.10	ENSMUST00000234191.2	3174	8	15527	-1025	15527	1025	3prime_fragment	FALSE	canonical	3	6	junction_1	3.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTGGGTGTTAATT	NA	False	NA	1	True	AATAAA	-11	NA	31910383	31916821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31912007_31913094_31913223_31913696
ES.16251.3	chr18	+	6080	9	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	-19	1335	intron_retention	FALSE	canonical	0	0	junction_7	44.3309640657633	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6848	False	NA	10	True	AATAAA	-17	NA	31892859	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31909842_31909914_31911909_31913223_31913696
ES.16251.4	chr18	+	4921	9	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	-19	1335	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	37.6345502829514	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6848	False	NA	10	True	AATAAA	-17	NA	31892859	31917131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
ES.16251.5	chr18	+	4367	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	-10	1029	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	6857	False	NA	5	True	AATAAA	-15	NA	31892868	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.6	chr18	+	3449	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-64	0	-10	0	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTAAACTTCACCCCT	6857	False	NA	NA	False	TTTAAA	-26	NA	31892868	31915796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.7	chr18	+	4601	9	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	-5	1029	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	37.6345502829514	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGGTGTTAATTTTAA	6862	False	NA	5	True	AATAAA	-15	NA	31892873	31916825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
ES.16251.8	chr18	+	2549	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	-54	890	0	-889	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCTACCATACTGGG	6867	False	NA	3	True	AATAAA	-16	NA	31892878	31914906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ES.16251.9	chr18	+	4534	9	NNC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	2	1025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	42.4424242356631	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTGGGTGTTAATT	6869	False	NA	1	True	AATAAA	-11	NA	31892880	31916821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31909842_31909915_31911909_31912007_31913696
ES.16252.1	chr18	-	3758	3	NNC	ENSMUSG00000097748.2	novel	1790	3	NA	NA	-2	5476	intron_retention	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTAAACAGTTTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	31922100	31908802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_31912066_31918602_31918808_31921810
ES.16252.2	chr18	-	1943	1	NIC	ENSMUSG00000097748.2	novel	1790	3	NA	NA	1	-5876	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGTAA	NA	False	NA	NA	False	NA	NA	NA	31922097	31920154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_31920200_31922100
ES.16253.1	chr18	+	974	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-55	-213	-54	1	multi-exon	FALSE	canonical	3	63	junction_2	315.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTGTATTTATTTG	NA	False	NA	22	True	AATAAA	-21	NA	31922157	31929755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31922298_31924892_31925074_31929102
ES.16253.2	chr18	+	1047	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-31	-1	-31	1	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTGTATTTATTTG	NA	False	NA	22	True	AATAAA	-21	NA	31922180	31929755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
ES.16253.3	chr18	+	6060	3	NNC	ENSMUSG00000024258.5	novel	1015	4	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	351.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922193	31929754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31926123_31926957_31928437_31929102
ES.16253.4	chr18	+	4960	2	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	-12	0	-12	0	intron_retention	FALSE	canonical	3	694	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922199	31929754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31922298_31924892
ES.16253.5	chr18	+	868	4	NNC	ENSMUSG00000024258.5	novel	1015	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	329.296556651026	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAATTGTATTTATT	NA	False	NA	20	True	AATAAA	-19	NA	31922203	31929753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31922298_31924892_31924967_31928387_31928437_31929102
ES.16253.6	chr18	+	6154	2	ISM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	1016	-3869	1016	3657	3prime_fragment	FALSE	canonical	3	63	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAATAGCTGCTCATTTGT	933	False	NA	NA	False	NA	NA	NA	31923228	31933411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31925074_31929102
ES.16254.1	chr18	+	4661	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-81	-5	-73	5	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCACTGTGCAGTGCTG	5574	False	NA	44	True	AATACA	-27	NA	31937069	32040455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.10	chr18	+	4696	23	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_18	117.755805598136	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCACTGTGCAGTGCT	5627	False	NA	43	True	AATACA	-26	NA	31937122	32040454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32027356_32027446_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.11	chr18	+	4361	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	-15	-141	combination_of_known_splicesites	FALSE	canonical	2	15	junction_19	111.330543877231	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTGTCCTGAGAAAT	5632	False	NA	13	True	GATAAA	-14	NA	31937127	32040309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32037288_32037505_32039818
ES.16254.15	chr18	+	4277	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-15	313	-7	246	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTGACCGCTTCTTCT	5640	False	NA	NA	False	NA	NA	NA	31937135	32040137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.16	chr18	+	5033	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-12	-446	-4	446	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGACTCTGTGATG	5643	False	NA	NA	False	AAAACA	-18	NA	31937138	32040896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.17	chr18	+	4415	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	109.130099811222	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCACTGTGCAGTGCT	5647	False	NA	43	True	AATACA	-26	NA	31937142	32040454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029825_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.18	chr18	+	6040	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	1	559	intron_retention	FALSE	canonical	3	169	junction_7	94.3738708541724	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCGAAGGCAGAAAGGTC	5651	False	NA	NA	False	AATAAA	-17	NA	31937146	32041009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.2	chr18	+	4540	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-65	100	-57	-100	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGTCCGATTGGAGAT	5590	False	NA	54	True	NA	NA	NA	31937085	32040350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.20	chr18	+	1595	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-81	902	2	-902	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGTGCCATCTATGT	5652	False	NA	NA	False	AATAAA	-18	NA	31937147	31967573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ES.16254.21	chr18	+	1167	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-79	1328	-1	-1328	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATCTAAAGCCTGCA	5654	False	NA	NA	False	AATAAA	-27	NA	31937149	31967147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ES.16254.24	chr18	+	6795	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	-1	570	intron_retention	FALSE	canonical	3	169	junction_6	94.416312149967	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGTCTCTGAGTTCAA	5654	False	NA	NA	False	AATAAA	-28	NA	31937149	32041020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.25	chr18	+	7934	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-143	intron_retention	FALSE	canonical	3	169	junction_7	94.5803362227054	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGTGTCCTGAGAA	5655	False	NA	11	True	GATAAA	-12	NA	31937150	32040307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.26	chr18	+	1805	16	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	127.120415354891	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATGTGATTTACT	5655	False	NA	12	True	NA	NA	NA	31937150	32040423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020822_32040388
ES.16254.27	chr18	+	6225	20	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	169	junction_7	97.9132127443324	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCAGCACCCACTGTGC	5655	False	NA	37	True	AATACA	-20	NA	31937150	32040448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32037505_32039818
ES.16254.28	chr18	+	4263	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-140	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	109.130099811222	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTCCTGAGAAATG	5655	False	NA	14	True	GATAAA	-15	NA	31937150	32040310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029825_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.29	chr18	+	4737	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	110.350051141121	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCTCAAAACCTCAGAC	5655	False	NA	NA	False	TTTAAA	-20	NA	31937150	32040657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037475_32039833
ES.16254.3	chr18	+	4325	19	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	-32	111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.4837894460513	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTGCTTTTCACAT	5615	False	NA	NA	False	NA	NA	NA	31937110	32040561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.30	chr18	+	4428	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-42	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	101.885769369427	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTTTGTATGAATAC	5655	False	NA	-3	True	NA	NA	NA	31937150	32040408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.31	chr18	+	4532	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	103.877740801452	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATGTGATTTACT	5655	False	NA	12	True	NA	NA	NA	31937150	32040423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962943_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.32	chr18	+	6775	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	-2200	0	2200	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATTGTAAGTGAACTG	5655	False	NA	NA	False	CATAAA	-20	NA	31937150	32042650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.33	chr18	+	3819	7	ISM	ENSMUSG00000024400.17	ENSMUST00000082319.15	1115	8	8	3246	0	2974	5prime_fragment	FALSE	canonical	3	199	junction_6	91.288918641129	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACAGTTGTGTTTTTCCT	5655	False	NA	NA	False	ATTAAA	-10	NA	31937150	31971449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436
ES.16254.34	chr18	+	4686	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	-111	0	111	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTGCTTTTCACAT	5655	False	NA	NA	False	NA	NA	NA	31937150	32040561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.36	chr18	+	4198	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	7	-143	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	88.501680775	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGTGTCCTGAGAA	5662	False	NA	11	True	GATAAA	-12	NA	31937157	32040307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.37	chr18	+	4475	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	2	15	junction_19	111.330543877231	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCCACTGTGCAGTGC	5662	False	NA	42	True	AATACA	-25	NA	31937157	32040453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32037288_32037505_32039818
ES.16254.38	chr18	+	5321	16	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	7	15851	7	5176	5prime_fragment	FALSE	canonical	3	169	junction_7	105.765442791532	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATTTTGTTTTGTTT	5662	False	NA	NA	False	ATTAAA	-17	NA	31937157	32024599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122
ES.16254.39	chr18	+	4532	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	10	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	110.402438436379	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATGTGATTTACT	5665	False	NA	12	True	NA	NA	NA	31937160	32040423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012996_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.4	chr18	+	3426	16	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-38	17791	-30	3236	5prime_fragment	FALSE	canonical	3	169	junction_7	105.765442791532	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGCGTGTGTGTGT	5617	False	NA	NA	False	TTTAAA	-26	NA	31937112	32022659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122
ES.16254.41	chr18	+	4332	23	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	10	-142	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	107.848186841313	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGTGTCCTGAGAAA	5665	False	NA	12	True	GATAAA	-13	NA	31937160	32040308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32029735_32029825_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.43	chr18	+	6455	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	18	-1898	18	1898	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGAAAGTAGCATTTCC	5673	False	NA	NA	False	NA	NA	NA	31937168	32042348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.47	chr18	+	4573	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	21	115	combination_of_known_splicesites	FALSE	canonical	2	15	junction_19	111.330543877231	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTTTCACATCATT	5676	False	NA	NA	False	NA	NA	NA	31937171	32040565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32037288_32037505_32039818
ES.16254.48	chr18	+	4566	22	NNC	ENSMUSG00000024400.17	novel	608	2	NA	NA	157	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.391497807579	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGAATGTGATTTACT	106	False	NA	12	True	NA	NA	NA	31937385	32040423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937561_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.49	chr18	+	3760	1	Intergenic	novelGene_13561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2286	False	NA	NA	False	NA	NA	NA	31939565	31943325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31939600_31943300
ES.16254.5	chr18	+	2277	1	Genic_Genomic	ENSMUSG00000024400.17	novel	NA	NA	NA	NA	-27	-22513	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAGTAAATTGCT	5620	False	NA	NA	False	NA	NA	NA	31937115	31939392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_31937100_31939400
ES.16254.50	chr18	+	7398	21	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	23263	-141	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	103.263001602704	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTGTCCTGAGAAAT	2465	False	NA	13	True	GATAAA	-14	NA	31960491	32040309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32029085_32029288_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.51	chr18	+	7250	1	Intergenic	novelGene_13563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCTTACCGAGCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	31995390	32002640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_31995400_32002600
ES.16254.52	chr18	+	4960	13	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	75858	-1589	-2186	1589	3prime_fragment	FALSE	canonical	3	198	junction_5	24.339468404676	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTAGAGCTGCGTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	32013008	32042039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.53	chr18	+	2962	10	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	81918	143	3874	-143	3prime_fragment	FALSE	canonical	3	198	junction_2	27.6530533219153	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGTGTCCTGAGAA	NA	False	NA	11	True	GATAAA	-12	NA	32019068	32040307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.54	chr18	+	3077	10	ISM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	81918	28	3874	-28	3prime_fragment	FALSE	canonical	3	198	junction_2	27.6530533219153	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACAGAATGTGATTTAC	NA	False	NA	11	True	NA	NA	NA	32019068	32040422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.55	chr18	+	4126	8	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	5597	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	82.4056665378724	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCAGCACCCACTGTG	NA	False	NA	36	True	AATACA	-19	NA	32020791	32040447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32020903_32021122_32022194_32026042_32027446_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.56	chr18	+	6074	8	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	5673	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.7624013367212	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTGGCCTTAAGGAGC	NA	False	NA	56	True	AATACA	-39	NA	32020867	32040467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32020903_32021122_32022194_32026042_32029085_32029288_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.57	chr18	+	5344	6	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	6788	-22	intron_retention	FALSE	canonical	3	214	junction_2	25.0311805554592	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTGATTTACTGAGTT	NA	False	NA	17	True	NA	NA	NA	32021982	32040428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32022194_32026042_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.58	chr18	+	2089	8	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	6915	263	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	105.509454069098	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTCTGGGTCTTC	NA	False	NA	NA	False	AAGAAA	-3	NA	32022109	32040713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32022194_32026042_32026152_32027356_32027446_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.6	chr18	+	2534	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	-111	-7	-25	7	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTAGAATCTGGGATTT	5622	False	NA	14	True	AATAAA	-25	NA	31937117	31968482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ES.16254.7	chr18	+	4571	22	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	109.590290382094	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGCAGCACCCACTG	5625	False	NA	34	True	AATACA	-17	NA	31937120	32040445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966759_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.8	chr18	+	9126	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-30	-4521	-22	4521	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCTGGGTTGTTTTTT	5625	False	NA	NA	False	AATAAA	-18	NA	31937120	32044971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16254.9	chr18	+	4886	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	-28	-283	-20	283	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGAGGTTCTCCCTTGG	5627	False	NA	NA	False	AAGAAA	-23	NA	31937122	32040733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ES.16255.1	chr18	-	4280	1	Intergenic	novelGene_13562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAATAAAAAAA	4319	False	NA	NA	False	NA	NA	NA	31993824	31989544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_31989500_31993800
ES.16256.1	chr18	-	227	1	Intergenic	novelGene_13564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCTAAGGGCAAGAGAG	NA	False	NA	NA	False	CATAAA	-9	NA	32003481	32003254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32003300_32003500
ES.16257.1	chr18	-	1223	1	Intergenic	novelGene_13565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATTTACTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	32007817	32006594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32006600_32007800
ES.16258.1	chr18	-	2771	1	Antisense	novelGene_ENSMUSG00000024400.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCATGTACTGAGTCAT	NA	False	NA	NA	False	AATATA	-43	NA	32011608	32008837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_32008800_32011600
ES.16259.1	chr18	-	361	1	Intergenic	novelGene_13566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACATAAAAATAAAATTTT	7697	False	NA	NA	False	NA	NA	NA	32029283	32028922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32028900_32029300
ES.16259.2	chr18	-	245	1	Intergenic	novelGene_13567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTTCATCCTAGCCCT	7697	False	NA	NA	False	NA	NA	NA	32029283	32029038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32029000_32029300
ES.1626.1	chr1	+	1401	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	-44	1435	-44	106	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAATCTTGCTTTTGTTG	NA	False	NA	25	True	NA	NA	NA	153775645	153784034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ES.1626.2	chr1	+	1902	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	890	0	651	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGATGTATGTCTTT	NA	False	NA	NA	False	AAAAAG	-15	NA	153775689	153784579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ES.1626.4	chr1	+	2613	1	FSM	ENSMUSG00000099227.3	ENSMUST00000183582.3	111	1	20	-2522	20	2522	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTTCCAAAGAGTGGAA	NA	False	NA	NA	False	NA	NA	NA	153775691	153778304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_153775700_153778300
ES.16260.1	chr18	-	4998	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	557	-2828	557	2828	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTGTGTCTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	32044320	32039322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_32039300_32044300
ES.16260.2	chr18	-	1473	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	1248	6	1248	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACATGAGCTGGATGG	NA	False	NA	NA	False	TATAAA	-12	NA	32043629	32042156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_32042200_32043600
ES.16260.3	chr18	-	1221	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	546	960	546	-960	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAAGTGTAAATATT	NA	False	NA	72	True	AGTAAA	-14	NA	32044331	32043110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_32043100_32044300
ES.16261.1	chr18	-	6752	1	Intergenic	novelGene_13568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCAGAGAGTAAGGGTG	NA	False	NA	NA	False	NA	NA	NA	32051737	32044985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32045000_32051700
ES.16262.1	chr18	+	126	1	Intergenic	novelGene_13569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	32188963	32189089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_32189000_32189100
ES.16263.1	chr18	+	6092	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	-35	3556	-35	2321	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTCACTCCAGTATTG	NA	False	NA	NA	False	NA	NA	NA	32200758	32233825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.10	chr18	+	4418	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	12	5183	12	694	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGACATGTAAAGCAAG	NA	False	NA	10	True	AATAAA	-23	NA	32200805	32232198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.11	chr18	+	2905	15	NNC	ENSMUSG00000024384.5	novel	2936	15	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.4205894045018	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCTCATCATTGTC	NA	False	NA	18	True	AATAAA	-19	NA	32200828	32230573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217797_32219091_32219234_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.12	chr18	+	5999	14	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	8	2320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.7067730939164	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTCACTCCAGTATT	NA	False	NA	NA	False	NA	NA	NA	32200828	32233824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216490_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.13	chr18	+	4140	1	NIC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	10	1425	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32200830	32204970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32200800_32205000
ES.16263.15	chr18	+	2731	14	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.7067730939164	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGTTGTCTCATCAT	NA	False	NA	14	True	AATAAA	-15	NA	32200841	32230569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216490_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.16	chr18	+	2549	14	NIC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	0	-199	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	55.8815314941366	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGTGGACTATGGAGA	NA	False	NA	NA	False	AAGAAA	-5	NA	32200846	32230373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216321_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.17	chr18	+	3316	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	56	6241	3	-364	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATAGTGCTTTTCCAAGT	NA	False	NA	NA	False	NA	NA	NA	32200849	32231140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.18	chr18	+	5677	12	NNC	ENSMUSG00000024384.5	novel	716	6	NA	NA	252	-9	intron_retention	FALSE	canonical	0	0	junction_1	63.6554516826769	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAACAAGCATACTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	32201106	32231495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201188_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.19	chr18	+	2433	13	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	60.8939766223958	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCTCATCATTGTC	NA	False	NA	18	True	AATAAA	-19	NA	32203202	32230573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221338_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.2	chr18	+	3757	14	NNC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	-5	4230	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	58.1131318608329	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGGGTTTGGTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	32200788	32241611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32240293
ES.16263.20	chr18	+	2585	1	Intergenic	novelGene_13570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGAGAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32208959	32211544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_32209000_32211500
ES.16263.21	chr18	+	3911	11	NIC	ENSMUSG00000024384.5	novel	9613	14	NA	NA	-3597	-2	intron_retention	FALSE	canonical	3	171	junction_1	18.2726571685675	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGGTTGTCTCATCATT	NA	False	NA	15	True	AATAAA	-16	NA	32212721	32230570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32213631_32216318_32216512_32217231_32217290_32217705_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.22	chr18	+	6387	12	ISM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	12047	2694	-3478	-2694	3prime_fragment	FALSE	canonical	3	171	junction_1	17.4308551351849	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGTCTGTCGGTGCATA	NA	False	NA	NA	False	TTTAAA	-22	NA	32212840	32234687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.23	chr18	+	3828	12	ISM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	12662	4638	-2863	1239	3prime_fragment	FALSE	canonical	3	171	junction_1	17.4308551351849	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAATAGAAACAACCCATG	NA	False	NA	NA	False	NA	NA	NA	32213455	32232743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.25	chr18	+	3282	7	ISM	ENSMUSG00000024384.5	ENSMUST00000212115.2	4329	13	16973	935	1501	-3	3prime_fragment	FALSE	canonical	3	201	junction_6	11.8380272380532	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGTTGTCTCATCAT	NA	False	NA	14	True	AATAAA	-15	NA	32217819	32230569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.26	chr18	+	4103	1	Intergenic	novelGene_13571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGTTTGGTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	32237511	32241614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_32237500_32241600
ES.16263.27	chr18	+	4113	1	Antisense	novelGene_ENSMUSG00000117481.2_AS_novelGene_ENSMUSG00000117650.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCTACTTGAGGAGT	1120	False	NA	NA	False	AATAAA	-13	NA	32241445	32245558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_32241400_32245600
ES.16263.3	chr18	+	2927	14	NNC	ENSMUSG00000024384.5	novel	2936	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.833871352303	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200790	32230572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201216_32203159_32203276_32212723_32213631_32216321_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.4	chr18	+	2696	13	ISM	ENSMUSG00000024384.5	ENSMUST00000212675.2	2936	15	-27	4028	0	-292	5prime_fragment	FALSE	canonical	3	171	junction_3	17.8854379003951	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTCTTGGTAATCTT	NA	False	NA	NA	False	AATGAA	-14	NA	32200793	32226544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170
ES.16263.5	chr18	+	2806	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	1	6806	1	3	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTCATCATTGTCTT	NA	False	NA	20	True	AATAAA	-21	NA	32200794	32230575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.6	chr18	+	3723	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	10	5880	10	-3	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCATACTTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-31	NA	32200803	32231501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.7	chr18	+	2095	2	FSM	ENSMUSG00000024384.5	ENSMUST00000212104.2	624	2	-50	-1421	11	1421	multi-exon	FALSE	canonical	3	201	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAACGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	32200804	32204966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32201093_32203159
ES.16263.8	chr18	+	6061	11	NIC	ENSMUSG00000024384.5	novel	4329	13	NA	NA	11	-3	intron_retention	FALSE	canonical	3	171	junction_3	19.5297209401466	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGTTGTCTCATCAT	NA	False	NA	14	True	AATAAA	-15	NA	32200804	32230569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16263.9	chr18	+	2984	14	NNC	ENSMUSG00000024384.5	novel	2936	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.7067730939164	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200804	32230572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216703_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ES.16264.1	chr18	-	848	1	Antisense	novelGene_ENSMUSG00000024384.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTTTCATGATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	32201227	32200379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_32200400_32201200
ES.16265.1	chr18	-	1168	2	Fusion	ENSMUSG00000117481.2_ENSMUSG00000117650.2	novel	537	2	NA	NA	-2135	56	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACTACCAACCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	32247495	32245037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_32246026_32247315
ES.16266.1	chr18	-	1389	7	NNC	ENSMUSG00000024386.10	novel	1566	9	NA	NA	1696	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.81894409826699	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCCCCGAGTACCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	32267103	32256181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_32256870_32258157_32258266_32260445_32260592_32266199_32266335_32266428_32266567_32266685_32266711_32266954
ES.16266.2	chr18	-	1389	6	NNC	ENSMUSG00000024386.10	novel	1575	9	NA	NA	1831	-7	intron_retention	FALSE	canonical	0	0	junction_5	3.84707681233427	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACATACCTCCCCGAG	NA	False	NA	NA	False	ATTAAA	-10	NA	32266968	32256188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199_32266335_32266428_32266711_32266941
ES.16266.3	chr18	-	2440	1	NIC	ENSMUSG00000024386.10	novel	1575	9	NA	NA	10171	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACATACCTCCCCGAG	NA	False	NA	NA	False	ATTAAA	-10	NA	32258628	32256188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_32256200_32258600
ES.16266.4	chr18	-	1794	2	ISM	ENSMUSG00000024386.10	ENSMUST00000234198.2	733	5	2063	-1345	2063	1345	intron_retention	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	32266736	32264848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_32266335_32266428
ES.16267.1	chr18	+	10902	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-218	0	-111	0	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTATGGATATGGT	NA	False	NA	8	True	AATAAA	-24	NA	32296030	32369804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.10	chr18	+	5482	16	NNC	ENSMUSG00000024383.10	novel	10684	17	NA	NA	3	-5163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.86363558061227	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTCTCACCTTACTC	NA	False	NA	NA	False	AATAAA	-15	NA	32296148	32364641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336085_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32353557_32353688_32359604_32359783_32361175
ES.16267.11	chr18	+	4900	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	135	5649	135	-5649	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAATGTTTCTTTGTGG	NA	False	NA	NA	False	AATATA	-17	NA	32296383	32364155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.12	chr18	+	8939	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	314	1431	314	-1431	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTCATGAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	32296562	32368373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.13	chr18	+	9067	4	ISM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	55162	4	55162	-4	3prime_fragment	FALSE	canonical	2	7	junction_2	2.05480466765633	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTGTGTGTATGGATA	NA	False	NA	4	True	AATAAA	-20	NA	32351410	32369800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.14	chr18	+	3554	1	ISM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	68314	1688	68314	-1688	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTTTATCTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	32364562	32368116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32364600_32368100
ES.16267.2	chr18	+	5739	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-217	5162	-110	-5162	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCTCACCTTACTCC	NA	False	NA	NA	False	AATAAA	-16	NA	32296031	32364642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.3	chr18	+	9315	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-215	1584	-108	-1584	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGGCAAATGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	32296033	32368220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.4	chr18	+	5427	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-149	5406	-42	-5406	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTGATAGCATTTTAAT	NA	False	NA	NA	False	AATAAA	-12	NA	32296099	32364398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.5	chr18	+	6794	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-130	4020	-23	-4020	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCAAGAGTGTCTCTGG	NA	False	NA	NA	False	AATGAA	-19	NA	32296118	32365784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.6	chr18	+	6969	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-105	3820	-2	-3820	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATTTTTGGGTTGAG	NA	False	NA	NA	False	AATAAA	-35	NA	32296143	32365984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.7	chr18	+	8007	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-105	2782	-2	-2782	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGGTGGTGTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	32296143	32367022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.8	chr18	+	2576	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	-103	8211	0	-8211	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTGAAACTTCTTTT	NA	False	NA	NA	False	AGTAAA	-35	NA	32296145	32361593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ES.16267.9	chr18	+	10654	16	NIC	ENSMUSG00000024383.10	novel	10684	17	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	4.82585628556103	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTGTATGGATATGG	NA	False	NA	7	True	AATAAA	-23	NA	32296145	32369803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32353557_32353688_32359604_32359783_32361175
ES.16268.1	chr18	+	2709	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	-1	0	-1	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373351	32403204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.2	chr18	+	2664	15	NNC	ENSMUSG00000024382.14	novel	2708	15	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	29.4441706229513	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTTGTCTCTATTTT	NA	False	NA	NA	False	TATAAA	-20	NA	32373384	32403200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397608_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.4	chr18	+	2888	14	NNC	ENSMUSG00000024382.14	novel	2708	15	NA	NA	318	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.5185523056116	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTTGTCTCTATTTT	NA	False	NA	NA	False	TATAAA	-20	NA	32373724	32403200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32373889_32376016_32376254_32377851_32377902_32378189_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387137_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.5	chr18	+	5914	14	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	472	-3470	418	3470	3prime_fragment	FALSE	canonical	3	78	junction_5	14.8511350750625	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTAAGTATTGATT	NA	False	NA	NA	False	ATTAAA	-20	NA	32373824	32406674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.6	chr18	+	3368	12	ISM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	3270	4	3216	-4	3prime_fragment	FALSE	canonical	3	78	junction_3	16.0531143189988	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTTGTCTCTATTTT	NA	False	NA	NA	False	TATAAA	-20	NA	32376622	32403200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.7	chr18	+	3195	10	NIC	ENSMUSG00000024382.14	novel	2781	14	NA	NA	3418	-5	intron_retention	FALSE	canonical	2	2	junction_6	35.7328910973187	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACATTTGTCTCTATTT	NA	False	NA	NA	False	TATAAA	-19	NA	32376824	32403199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32377902_32378541_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16268.8	chr18	+	2485	6	NIC	ENSMUSG00000024382.14	novel	2781	14	NA	NA	-4502	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	47.08035683807	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTCTCTATTTTATT	254	False	NA	NA	False	TATAAA	-23	NA	32385819	32403203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32387319_32390242_32390446_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ES.16269.1	chr18	-	184	1	Intergenic	novelGene_13572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATCCAAATTATACTG	NA	False	NA	NA	False	NA	NA	NA	32408326	32408142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32408100_32408300
ES.1627.1	chr1	-	603	4	NNC	ENSMUSG00000045968.8	novel	1851	3	NA	NA	-6268	-2838	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGTCGCTGGCTGCTCG	8564	False	NA	NA	False	NA	NA	NA	153782242	153775691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_153775803_153778676_153778857_153780280_153780443_153782092
ES.1627.2	chr1	-	2111	2	Antisense	novelGene_ENSMUSG00000026473.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAAACCTTCATTTTC	6782	False	NA	NA	False	AAAACA	-3	NA	153784024	153781389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_153782240_153782763
ES.16270.1	chr18	-	176	1	Intergenic	novelGene_13573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAAATCA	2031	False	NA	NA	False	NA	NA	NA	32460477	32460301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_32460300_32460500
ES.16271.1	chr18	+	2199	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	-107	-1	-92	1	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510190	32568791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ES.16271.2	chr18	+	2116	15	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	-26	-31	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	10.3903408834104	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAGAAAAA	NA	False	NA	-21	True	NA	NA	NA	32510256	32568753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
ES.16271.3	chr18	+	2209	16	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	9.63788819653397	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAACGAGGCGTGTCTTT	NA	False	NA	13	True	AAAAAG	-20	NA	32510269	32568787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ES.16271.4	chr18	+	1994	15	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	12	-31	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	10.0815551926298	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAGAAAAA	NA	False	NA	-21	True	NA	NA	NA	32510321	32568753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ES.16271.5	chr18	+	1953	14	NIC	ENSMUSG00000024381.17	novel	2406	19	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	10.0660540325881	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510328	32568791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ES.16271.6	chr18	+	1901	14	FSM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	75	-446	48	-1	multi-exon	FALSE	canonical	2	3	junction_10	8.17631157710597	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCGTGTCTTTCT	NA	False	NA	15	True	AAAAAG	-22	NA	32510357	32568789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ES.16271.7	chr18	+	1825	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	66	-5	54	1	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCGTGTCTTTCTTT	NA	False	NA	17	True	AAAAAG	-24	NA	32510363	32568791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ES.16271.8	chr18	+	151	1	Intergenic	novelGene_13574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACCGTTGAG	NA	False	NA	NA	False	NA	NA	NA	32553831	32553982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_32553800_32554000
ES.16271.9	chr18	+	2586	3	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	52931	33	2142	-31	3prime_fragment	FALSE	canonical	3	29	junction_1	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAGAAAAA	4755	False	NA	-21	True	NA	NA	NA	32563228	32568753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32565147_32565376_32565479_32568187
ES.16272.1	chr18	-	2086	3	FSM	ENSMUSG00000090523.3	ENSMUST00000174459.2	2180	3	87	7	33	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATGAATTGTTTAGGTT	NA	False	NA	NA	False	AATAAA	-11	NA	32693000	32661381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_32663255_32665786_32665838_32692838
ES.16273.1	chr18	+	161	1	Intergenic	novelGene_13575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAAATCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	32729713	32729874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_32729700_32729900
ES.16274.1	chr18	+	2898	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	-4	1561	-4	-367	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	8960	False	NA	13	True	AATAAA	-24	NA	32970273	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.10	chr18	+	6409	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	31	-1985	3	1985	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTCTGGAAATTCCAAG	8995	False	NA	NA	False	AATACA	-22	NA	32970308	33002632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.11	chr18	+	4566	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	32	-143	4	143	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACATGTTAC	8996	False	NA	NA	False	AATACA	-20	NA	32970309	33000790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.13	chr18	+	2812	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	243.440548321572	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	9000	False	NA	5	True	TATAAA	-18	NA	32970313	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983533_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994622_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
ES.16274.14	chr18	+	2919	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	17	-370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.167634955073	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTATGTGCCAAGTGTG	9009	False	NA	10	True	AATAAA	-21	NA	32970322	32999083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32975303_32975377_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.15	chr18	+	2830	22	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	25	-375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.254586423021	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGCTATGTGCCAA	9017	False	NA	5	True	AATAAA	-16	NA	32970330	32999078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970616_32974074_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.16	chr18	+	2818	23	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	25	-367	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_17	156.90480479767	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	9017	False	NA	13	True	AATAAA	-24	NA	32970330	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994102_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.17	chr18	+	3225	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	27	-370	intron_retention	FALSE	canonical	3	587	junction_7	68.2854486280281	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTATGTGCCAAGTGTG	9019	False	NA	10	True	AATAAA	-21	NA	32970332	32999083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.19	chr18	+	3103	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	27	-374	intron_retention	FALSE	canonical	3	587	junction_7	67.3424928100266	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGCTATGTGCCAAG	9019	False	NA	6	True	AATAAA	-17	NA	32970332	32999079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.2	chr18	+	3314	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	-1	1142	-1	32	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGCTGTGTTTGTGTCTG	8963	False	NA	66	True	NA	NA	NA	32970276	32999505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.20	chr18	+	3155	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	56	1244	28	-50	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTATCTGTAATATACTTA	9020	False	NA	-36	True	ATTAAA	-19	NA	32970333	32999403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.22	chr18	+	2887	21	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	28	-9	intron_retention	FALSE	canonical	0	0	junction_6	167.378164645213	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	9020	False	NA	5	True	TATAAA	-18	NA	32970333	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.24	chr18	+	2104	15	FSM	ENSMUSG00000038299.17	ENSMUST00000234158.2	2330	15	29	197	29	-197	multi-exon	FALSE	canonical	3	587	junction_7	49.641007159774	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCATTTTGTTTTAA	9021	False	NA	NA	False	AATAAA	-23	NA	32970334	32986295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916
ES.16274.25	chr18	+	3537	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	29	-56	intron_retention	FALSE	canonical	3	587	junction_7	68.2854486280281	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAGCGTATCTGTAATA	9021	False	NA	-42	True	ATTAAA	-13	NA	32970334	32999397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.27	chr18	+	2828	23	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-26	-367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	161.734554488837	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	9024	False	NA	13	True	AATAAA	-24	NA	32970337	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980757_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.28	chr18	+	3200	23	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-23	8	intron_retention	FALSE	canonical	0	0	junction_20	155.153995748399	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTCTAGGTGGCT	9027	False	NA	22	True	ATTAAA	-15	NA	32970340	32999461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996239_32996316_32997705_32997894_32998905
ES.16274.3	chr18	+	2980	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	-74	0	12	0	multi-exon	FALSE	canonical	3	29	junction_23	153.127237455201	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	8976	False	NA	14	True	ATTAAA	-7	NA	32970289	32999453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
ES.16274.30	chr18	+	2689	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-22	-375	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	165.548041954628	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGCTATGTGCCAA	9028	False	NA	5	True	AATAAA	-16	NA	32970341	32999078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.32	chr18	+	3094	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	13	junction_3	162.85536061403	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGGCTTTTGATGAAA	9031	False	NA	32	True	ATTAAA	-25	NA	32970344	32999471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.35	chr18	+	5512	18	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-10	-369	intron_retention	FALSE	canonical	0	0	junction_9	181.433145150409	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGTGCCAAGTGTGC	9040	False	NA	11	True	AATAAA	-22	NA	32970353	32999084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32978699_32979882_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985085_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.36	chr18	+	3278	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	-9	10119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	158.489013770111	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTCCTGTTATTTT	9041	False	NA	NA	False	NA	NA	NA	32970354	33010766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_33010190
ES.16274.4	chr18	+	2617	21	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-7	-372	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	169.26594459607	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCTATGTGCCAAGTG	8985	False	NA	8	True	AATAAA	-19	NA	32970298	32999081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.40	chr18	+	2508	21	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-9	-367	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	167.378164645213	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	9041	False	NA	13	True	AATAAA	-24	NA	32970354	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.42	chr18	+	3177	23	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	162.048125695184	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9042	False	NA	14	True	ATTAAA	-7	NA	32970355	32999453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976942_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.43	chr18	+	2693	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-6	-370	combination_of_known_splicesites	FALSE	canonical	1	13	junction_3	162.85536061403	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTATGTGCCAAGTGTG	9044	False	NA	10	True	AATAAA	-21	NA	32970357	32999083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.44	chr18	+	4910	22	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-6	-55	intron_retention	FALSE	canonical	3	27	junction_16	160.485064047446	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCGTATCTGTAATAT	9044	False	NA	-41	True	ATTAAA	-14	NA	32970357	32999398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32987913_32992272_32992381_32994102_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.45	chr18	+	2891	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	-4	-372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	268.58557615819	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCTATGTGCCAAGTG	9046	False	NA	8	True	AATAAA	-19	NA	32970359	32999081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972509_32974095_32974197_32974949_32975068_32976814_32976948_32977430_32977521_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996235_32996316_32997705_32997894_32998905
ES.16274.46	chr18	+	2794	22	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-3	-372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.254586423021	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCTATGTGCCAAGTG	9047	False	NA	8	True	AATAAA	-19	NA	32970360	32999081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970616_32974083_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.47	chr18	+	3140	23	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	0	8	intron_retention	FALSE	canonical	0	0	junction_4	214.148554293007	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTCTAGGTGGCT	9050	False	NA	22	True	ATTAAA	-15	NA	32970363	32999461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32977430_32977521_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.49	chr18	+	2709	22	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	5	-374	combination_of_known_splicesites	FALSE	canonical	1	6	junction_10	164.602110786233	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGCTATGTGCCAAG	9055	False	NA	6	True	AATAAA	-17	NA	32970368	32999079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.50	chr18	+	7883	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	96	-3524	-1	3524	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCTCCTGAGTCCTCT	9060	False	NA	NA	False	AATAAA	-36	NA	32970373	33004171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.51	chr18	+	3187	23	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	162.048125695184	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9062	False	NA	14	True	ATTAAA	-7	NA	32970375	32999453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978619_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.53	chr18	+	9134	19	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	24	18	intron_retention	FALSE	canonical	3	587	junction_3	70.6100402051845	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTGTTGATTCTTGAGC	9085	False	NA	52	True	ATTAAA	-45	NA	32970398	32999491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.54	chr18	+	2867	22	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	120	-367	intron_retention	FALSE	canonical	3	27	junction_16	160.595914079554	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	9181	False	NA	13	True	AATAAA	-24	NA	32970494	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32986026_32987832_32987913_32992272_32992381_32994102_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.55	chr18	+	3051	23	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	194	19	intron_retention	FALSE	canonical	0	0	junction_1	211.985673147585	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTGATTCTTGAGCT	9255	False	NA	53	True	AAAAAG	-43	NA	32970568	32999492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970658_32972484_32972509_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.56	chr18	+	4289	17	NNC	ENSMUSG00000038299.17	novel	3063	8	NA	NA	7113	-367	intron_retention	FALSE	canonical	2	5	junction_1	184.816082565885	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	NA	False	NA	13	True	AATAAA	-24	NA	32977487	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32977521_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.57	chr18	+	4740	13	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-5969	-9	intron_retention	FALSE	canonical	3	27	junction_7	207.863520261626	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	1593	False	NA	5	True	TATAAA	-18	NA	32980190	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32987913_32992272_32992381_32994102_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.58	chr18	+	2290	16	NNC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-5928	-9	intron_retention	FALSE	canonical	3	27	junction_10	186.073748820192	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	1634	False	NA	5	True	TATAAA	-18	NA	32980231	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994102_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.59	chr18	+	4355	13	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-5919	-367	intron_retention	FALSE	canonical	3	630	junction_2	68.1638141212444	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGCCAAGTGTGCTG	4	False	NA	13	True	AATAAA	-24	NA	32980240	32999086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.6	chr18	+	4764	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	29	-338	1	338	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAATGTCTTTACTT	8993	False	NA	NA	False	CATAAA	-15	NA	32970306	33000985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.60	chr18	+	3953	14	NIC	ENSMUSG00000038299.17	novel	4455	23	NA	NA	-5490	-9	intron_retention	FALSE	canonical	3	630	junction_1	68.2373164840672	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	433	False	NA	5	True	TATAAA	-18	NA	32980669	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.61	chr18	+	1944	13	ISM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	11761	53	-4035	-53	intron_retention	FALSE	canonical	3	650	junction_5	66.9303120168035	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGTATCTGTAATATAC	1888	False	NA	-39	True	ATTAAA	-16	NA	32982124	32999400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.62	chr18	+	6131	6	NIC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	2971	0	intron_retention	FALSE	canonical	3	715	junction_2	58.8401223656104	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	3822	False	NA	14	True	ATTAAA	-7	NA	32989130	32999453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.63	chr18	+	6942	3	NIC	ENSMUSG00000038299.17	novel	3063	8	NA	NA	4791	-35	intron_retention	FALSE	canonical	3	814	junction_2	38.5	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATAAAAATGCATTTCT	5642	False	NA	-21	True	ATTAAA	-34	NA	32990950	32999418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_32996098_32996233_32996316_32997705
ES.16274.7	chr18	+	3313	24	NNC	ENSMUSG00000038299.17	novel	2906	24	NA	NA	1	-9	intron_retention	FALSE	canonical	2	4	junction_5	208.934093858708	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATCAGTGGGTTC	8993	False	NA	5	True	TATAAA	-18	NA	32970306	32999444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32977430_32977521_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16274.8	chr18	+	4430	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	29	-4	1	4	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTTGTCCTGTTGT	8993	False	NA	NA	False	NA	NA	NA	32970306	33000651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ES.16275.1	chr18	-	5260	1	Antisense	novelGene_ENSMUSG00000038299.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACAATTAGGAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	32996136	32990876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_32990900_32996100
ES.16276.1	chr18	-	4026	1	Intergenic	novelGene_13576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTATCCTCTGGCCCAC	NA	False	NA	NA	False	NA	NA	NA	33005238	33001212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_33001200_33005200
ES.16277.1	chr18	+	3141	11	FSM	ENSMUSG00000038128.8	ENSMUST00000042868.6	2717	11	-7	-417	-7	417	multi-exon	FALSE	canonical	0	0	junction_5	3.0347981810987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACTGGGAACTGACGTT	4776	False	NA	NA	False	ATTAAA	-27	NA	33072203	33319740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_33072598_33211045_33211125_33240932_33240996_33242817_33242901_33262813_33262887_33289801_33289893_33291879_33291955_33309211_33309288_33312550_33312678_33315290_33315444_33317813
ES.16277.2	chr18	+	1599	11	FSM	ENSMUSG00000038128.8	ENSMUST00000042868.6	2717	11	181	937	181	-937	multi-exon	FALSE	canonical	0	0	junction_5	3.0347981810987	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCCTAATGTCAGTGCA	4964	False	NA	NA	False	NA	NA	NA	33072391	33318386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_33072598_33211045_33211125_33240932_33240996_33242817_33242901_33262813_33262887_33289801_33289893_33291879_33291955_33309211_33309288_33312550_33312678_33315290_33315444_33317813
ES.16278.1	chr18	-	7778	6	FSM	ENSMUSG00000024378.10	ENSMUST00000119991.8	941	6	-73	-6764	-18	2714	multi-exon	FALSE	canonical	1	1	junction_2	21.0959711793508	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTGTGTGCCTGATT	NA	False	NA	NA	False	NA	NA	NA	33346892	33329693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338273_33338379_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.10	chr18	-	1397	6	FSM	ENSMUSG00000024378.10	ENSMUST00000119991.8	941	6	-42	-414	13	414	multi-exon	FALSE	canonical	1	1	junction_2	21.0959711793508	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATTTATTCTGGGAG	NA	False	NA	-1	True	TATAAA	-19	NA	33346861	33336043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338273_33338379_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.11	chr18	-	1488	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	-27	3636	-27	414	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATTTATTCTGGGAG	NA	False	NA	-1	True	TATAAA	-19	NA	33346942	33336043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.12	chr18	-	1314	5	FSM	ENSMUSG00000024378.10	ENSMUST00000118990.2	648	5	-66	-600	-17	406	multi-exon	FALSE	canonical	0	0	junction_1	19.6643713349804	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTATGTGCATTTAT	NA	False	NA	-9	True	TATAAA	-11	NA	33346891	33336051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.13	chr18	-	1235	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	3	3859	3	191	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGAGTTTCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	33346912	33336266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.2	chr18	-	5158	5	FSM	ENSMUSG00000024378.10	ENSMUST00000118990.2	648	5	-48	-4462	1	218	multi-exon	FALSE	canonical	0	0	junction_1	19.6643713349804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTTTCCTATAATATTA	NA	False	NA	-11	True	AATAAA	-22	NA	33346873	33332189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.3	chr18	-	5257	6	FSM	ENSMUSG00000024378.10	ENSMUST00000119991.8	941	6	-51	-4265	4	215	multi-exon	FALSE	canonical	1	1	junction_2	21.0959711793508	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATGTTTCCTATAATA	NA	False	NA	-14	True	AATAAA	-19	NA	33346870	33332192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338273_33338379_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.4	chr18	-	5288	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	24	-215	-17	215	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATGTTTCCTATAATA	NA	False	NA	-14	True	AATAAA	-19	NA	33346891	33332192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.5	chr18	-	5028	6	NNC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	9	77	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	15.9072310601185	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTTTGTGTAAGTT	NA	False	NA	-3	True	AATAAA	-31	NA	33346906	33332330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346823
ES.16278.7	chr18	-	5136	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	23	-62	-18	62	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTGGTCATTGACC	NA	False	NA	-18	True	AATAAA	-16	NA	33346892	33332345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.8	chr18	-	5021	5	FSM	ENSMUSG00000024378.10	ENSMUST00000118990.2	648	5	-67	-4306	-18	62	multi-exon	FALSE	canonical	0	0	junction_1	19.6643713349804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTGGTCATTGACC	NA	False	NA	-18	True	AATAAA	-16	NA	33346892	33332345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16278.9	chr18	-	3918	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	56	1123	15	-1123	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCCTCAAAATTATTT	NA	False	NA	NA	False	AATAAA	-27	NA	33346859	33333530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ES.16279.2	chr18	-	2206	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	-23	2	-23	1	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCTTTGGCTCATTA	NA	False	NA	-6	True	AATAAA	-18	NA	33597105	33570073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ES.16279.3	chr18	-	2090	5	NNC	ENSMUSG00000042834.16	novel	2185	5	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.2525771826418	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTAACTGTGCTTTGGC	NA	False	NA	-12	True	AATAAA	-12	NA	33596472	33570079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33571893_33573053_33573144_33575868_33575947_33595073_33595141_33596430
ES.16279.4	chr18	-	1088	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	2	1095	2	325	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGGTGGAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33597080	33571166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ES.1628.1	chr1	-	177	1	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAGAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	153949407	153949230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_153949200_153949400
ES.16280.1	chr18	-	176	1	Intergenic	novelGene_13577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	33916467	33916291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_33916300_33916500
ES.16281.1	chr18	+	488	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	-56	-2	-56	2	multi-exon	FALSE	canonical	3	377	junction_1	24	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGTATGTTGTGTGAT	NA	False	NA	17	True	AATAAA	-21	NA	33927888	33929041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_33928178_33928435_33928499_33928905
ES.16281.2	chr18	+	1140	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-315	-693	-315	693	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGTATGTTGTGTGAT	NA	False	NA	17	True	AATAAA	-21	NA	33927901	33929041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_33927900_33929000
ES.16281.3	chr18	+	399	1	FSM	ENSMUSG00000092819.3	ENSMUST00000175078.3	132	1	-269	2	-269	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTACTCTAGCCTGTG	NA	False	NA	8	True	NA	NA	NA	33927947	33928346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_33927900_33928300
ES.16282.1	chr18	+	3211	1	Antisense	novelGene_ENSMUSG00000024376.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAATGGTTTCTTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	33929046	33932257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_33929000_33932300
ES.16283.1	chr18	+	1291	1	Antisense	novelGene_ENSMUSG00000024376.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAACAT	NA	False	NA	NA	False	ATTAAA	-41	NA	33986216	33987507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_33986200_33987500
ES.16284.1	chr18	+	158	1	Intergenic	novelGene_13580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAAATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	34003874	34004032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34003900_34004000
ES.16285.1	chr18	+	174	1	Intergenic	novelGene_13581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAATAAAAAAATA	9034	False	NA	NA	False	NA	NA	NA	34016206	34016380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34016200_34016400
ES.16286.1	chr18	+	343	3	Antisense	novelGene_ENSMUSG00000024376.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACAATGATGTCC	NA	False	NA	NA	False	ATTAAA	-10	NA	34024794	34027170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34024823_34025278_34025448_34027024
ES.16287.1	chr18	+	173	1	Intergenic	novelGene_13582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGAAACCCTAA	NA	False	NA	NA	False	NA	NA	NA	34104735	34104908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34104700_34104900
ES.16288.1	chr18	+	179	1	Intergenic	novelGene_13584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTACATTTGGGAC	NA	False	NA	NA	False	NA	NA	NA	34128545	34128724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34128500_34128700
ES.16289.1	chr18	-	6112	21	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	550	0	intron_retention	FALSE	canonical	3	125	junction_7	28.8978805451196	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34139422	33929379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.10	chr18	-	3123	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28995	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	58.1173648677704	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	34054022	33929380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34051345_34051486_34053910
ES.16289.11	chr18	-	3571	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	314	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.1912811906695	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34139658	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987405_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.13	chr18	-	3777	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-247	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	49.8294634260777	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34140266	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34012045_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.14	chr18	-	3517	23	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	50.158097160317	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34140030	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34139037_34139476_34139821
ES.16289.15	chr18	-	2991	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-29004	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34054031	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
ES.16289.16	chr18	-	3487	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.4074041632984	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	NA	False	NA	-2	True	AATAAA	-11	NA	34140037	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935611_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.17	chr18	-	3226	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	656	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	61.0608184822232	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGGTCTCTTTAC	32	False	NA	-2	True	AATAAA	-11	NA	34139316	33929381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994263_34007194_34007259_34007790_34007876_34009957_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.19	chr18	-	3453	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	20435	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	46.9978019531739	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	34119537	33929382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34119058
ES.16289.2	chr18	-	3948	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-382	0	-335	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34140354	33929379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.20	chr18	-	3799	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-196	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	50.7413471443053	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	34140215	33929382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961865_33965655_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.21	chr18	-	3557	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	47.5448251335035	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	34139985	33929382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.24	chr18	-	3739	23	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-249	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	49.337009393231	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGTCTGGTCTCTTTA	NA	False	NA	-3	True	AATAAA	-10	NA	34140268	33929382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.26	chr18	-	3541	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-565	590	-518	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34140537	33929969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.27	chr18	-	1390	12	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	4	-39	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	59.7486470679151	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCTTGTCTTGTGTT	NA	False	NA	-1	True	NA	NA	NA	33965843	33930008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33965813
ES.16289.29	chr18	-	2411	17	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-18	-39	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	59.4463715776665	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCCTTGTCTTGTGTT	NA	False	NA	-1	True	NA	NA	NA	34140037	33930008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34054882_34054988_34139037_34139476_34139821
ES.16289.31	chr18	-	2942	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	332	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	48.2061688038347	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTCCTTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	34139640	33930011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987405_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.32	chr18	-	3296	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-321	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	57.0310498125549	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTCCTTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	34140340	33930011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139808
ES.16289.33	chr18	-	2942	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-100	-42	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	58.2889815651365	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTCCTTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	34140119	33930011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.34	chr18	-	2861	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	277	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	47.1930836623086	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTCCTTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	34139695	33930011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139617
ES.16289.35	chr18	-	3231	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-271	-44	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	47.5448251335035	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140290	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.36	chr18	-	2509	17	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-101	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	70.2111769948347	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140120	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34054882_34054988_34139037_34139496_34139821
ES.16289.38	chr18	-	2491	18	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-73	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	79.7783694700144	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140092	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34019403_34019483_34024473_34024530_34139037_34139476_34139821
ES.16289.39	chr18	-	3147	22	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-393	-44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	61.6649935422962	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140412	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34139037_34139476_34139821
ES.16289.4	chr18	-	3560	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	60.9352725276299	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34140092	33929379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987405_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.41	chr18	-	2364	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-29009	-44	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054036	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
ES.16289.42	chr18	-	2464	16	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-237	-44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	61.051526507442	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140256	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.43	chr18	-	2468	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28995	-44	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	73.6815798324898	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054022	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935611_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34051345_34051486_34053910
ES.16289.44	chr18	-	2335	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28999	-44	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	55.5848720834648	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054026	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34053910
ES.16289.45	chr18	-	2134	20	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28997	-44	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_17	69.6931938874825	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054024	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34019403_34019483_34024477_34024530_34053910
ES.16289.48	chr18	-	2264	21	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-29007	-44	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	59.0566677014543	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34054034	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34019403_34019483_34024477_34024530_34053910
ES.16289.5	chr18	-	1712	1	FSM	ENSMUSG00000024376.8	ENSMUST00000236716.2	2286	1	1163	-589	1163	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	33931092	33929380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33929400_33931100
ES.16289.51	chr18	-	3002	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	321	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	73.8562373916577	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34139651	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34062633_34062818_34139037
ES.16289.52	chr18	-	2991	22	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	388	-44	intron_retention	FALSE	canonical	3	125	junction_8	28.6897549800678	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34139584	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.53	chr18	-	2937	23	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-66	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	61.3369133731781	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGTGTCCTTGTCTT	NA	False	NA	-6	True	NA	NA	NA	34140085	33930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935611_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34139037_34139476_34139821
ES.16289.56	chr18	-	2816	23	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-6	-46	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	49.337009393231	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	34139978	33930015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.57	chr18	-	2980	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	366	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	59.2910542285359	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	34139606	33930015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34025699_34025770_34054882_34054988_34139037
ES.16289.58	chr18	-	5354	5	NNC	ENSMUSG00000024376.8	novel	928	5	NA	NA	-1288	-46	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	87.0728861356967	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	33937439	33930015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33932515_33932573_33934693_33935565
ES.16289.6	chr18	-	3587	23	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-73	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_18	50.8290157584741	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	34140092	33929380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.60	chr18	-	1836	12	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-5102	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	63.568665288895	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	33970949	33930015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33970466
ES.16289.62	chr18	-	3359	25	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-311	-46	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	61.0243576141709	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAAGTGTCCTTGTC	NA	False	NA	-8	True	NA	NA	NA	34140330	33930015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931215_33931287_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.63	chr18	-	3071	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-74	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	50.6708120215798	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTTAAGTGTCCTTGT	NA	False	NA	-9	True	NA	NA	NA	34140093	33930016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019504_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.65	chr18	-	9021	11	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-21462	-57	intron_retention	FALSE	canonical	3	125	junction_8	29.4305963242337	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTGATTTGAATTTAA	NA	False	NA	-19	True	NA	NA	NA	33987309	33930026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288
ES.16289.66	chr18	-	5723	11	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-22041	-60	intron_retention	FALSE	canonical	3	125	junction_9	30.0006666592594	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTGTTGATTTGAATT	NA	False	NA	-22	True	NA	NA	NA	33987888	33930029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33965739_33987288
ES.16289.67	chr18	-	3112	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-379	833	-332	231	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTATTTCCTGAAATTC	NA	False	NA	NA	False	TATAAA	-15	NA	34140351	33930212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.69	chr18	-	2240	20	ISM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	314	5265	314	948	internal_fragment	FALSE	canonical	3	125	junction_6	29.417804170537	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCCGTACACTAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	34139658	33934644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.7	chr18	-	9208	5	FSM	ENSMUSG00000024376.8	ENSMUST00000235393.2	928	5	-7217	-1063	-7217	-1	multi-exon	FALSE	canonical	3	167	junction_1	23.1449238495183	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	33943368	33929380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565
ES.16289.70	chr18	-	2917	19	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-216	-7118	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_14	50.3478333296246	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGTGGTGTGCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	34140235	33942710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.71	chr18	-	1863	17	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	20663	-21714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	65.3607477294286	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTTGTCTTTTGTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	34119309	33957306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024473_34024530_34054882_34054988_34119058
ES.16289.72	chr18	-	1607	16	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	44	-21714	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	50.2572935558169	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTTGTCTTTTGTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	34024983	33957306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34024879
ES.16289.73	chr18	-	2094	15	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	354	-25332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.4742891367588	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCTCTCTGTATTTA	NA	False	NA	NA	False	TATAAA	-11	NA	34139618	33960924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33961271_33961779_33961864_33965643_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.74	chr18	-	3301	1	Intergenic	novelGene_13578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCTTTATATACATTAT	NA	False	NA	NA	False	NA	NA	NA	33973412	33970111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_33970100_33973400
ES.16289.75	chr18	-	1688	1	Intergenic	novelGene_13579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTCTCTTTTGTTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	33979921	33978233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_33978200_33979900
ES.16289.76	chr18	-	3033	14	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	-311	31773	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	55.2673973251916	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATTCTCTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	34140330	33978234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33979333_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ES.16289.77	chr18	-	2084	12	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	-28995	31764	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	69.1889256891342	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTCCCTAAAAATTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	34054022	33978243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33979333_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
ES.16289.78	chr18	-	1949	13	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	352	28286	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.8949595664257	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGACACATTTGGT	NA	False	NA	NA	False	NA	NA	NA	34139620	33981721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33982100_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.79	chr18	-	1882	11	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	16	23586	combination_of_known_junctions	FALSE	canonical	2	9	junction_10	54.9090156531694	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCATGGAGCCCAGAAC	NA	False	NA	NA	False	AATAAA	-37	NA	34025011	33986421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34024879
ES.16289.8	chr18	-	2026	12	NIC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	59.7486470679151	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGGTCTCTTTACT	NA	False	NA	-1	True	AATAAA	-12	NA	33965851	33929380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33965813
ES.16289.80	chr18	-	1752	13	NNC	ENSMUSG00000024376.8	novel	540	6	NA	NA	742	23561	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	53.1446532274571	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATAAAGCATTGTT	118	False	NA	NA	False	AATAAA	-12	NA	34139230	33986446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_33987018_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037
ES.16289.81	chr18	-	214	1	Intergenic	novelGene_13583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCTTTGGGTAATAGC	NA	False	NA	NA	False	NA	NA	NA	34116305	34116091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34116100_34116300
ES.16289.82	chr18	-	4350	2	ISM	ENSMUSG00000024376.8	ENSMUST00000237971.2	3777	3	-293	83770	-293	-83770	5prime_fragment	FALSE	canonical	3	87	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGAGATTTTGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	34140312	34135616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34139476_34139821
ES.16289.83	chr18	-	3956	7	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-21579	-83771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.6420957305647	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGGAGATTTTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	34161598	34135617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34138028_34139037_34139476_34139821_34140627_34141464_34141514_34147145_34147237_34148145_34148194_34161483
ES.16289.84	chr18	-	1199	1	Intergenic	novelGene_13585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTGACTATGCAAG	NA	False	NA	NA	False	NA	NA	NA	34141905	34140706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34140700_34141900
ES.16289.85	chr18	-	175	1	Intergenic	novelGene_13586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	34159320	34159145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34159100_34159300
ES.16289.86	chr18	-	1583	1	Intergenic	novelGene_13587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTGGTAATTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	34161544	34159961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34160000_34161500
ES.1629.1	chr1	+	174	1	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	153971690	153971864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_153971700_153971900
ES.16290.1	chr18	-	164	1	Intergenic	novelGene_13588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGTCTACTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	34188682	34188518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34188500_34188700
ES.16291.1	chr18	+	333	1	Intergenic	novelGene_13589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	34205227	34205560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34205200_34205600
ES.16291.2	chr18	+	223	1	Intergenic	novelGene_13590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTGGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	34205228	34205451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34205200_34205500
ES.16292.1	chr18	+	228	1	Intergenic	novelGene_13591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTTTTGCCAACATT	NA	False	NA	NA	False	NA	NA	NA	34233430	34233658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34233400_34233700
ES.16293.1	chr18	-	177	1	Intergenic	novelGene_13592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACACAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	34277735	34277558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34277600_34277700
ES.16294.1	chr18	+	178	1	Intergenic	novelGene_13593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34298909	34299087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34298900_34299100
ES.16295.1	chr18	+	9717	16	NNC	ENSMUSG00000005871.16	novel	2633	3	NA	NA	-2701	-2590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.899550518126	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCACCTCTCAATGCT	NA	False	NA	44	True	NA	NA	NA	34351275	34452652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34351428_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.10	chr18	+	9611	16	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-23	-2617	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	26	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATTCCTAAAATTTATT	NA	False	NA	17	True	AATAAA	-28	NA	34353953	34452625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.12	chr18	+	9692	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-18	-2783	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGGTATTTGTTTGA	NA	False	NA	20	True	AATAAA	-25	NA	34353958	34452459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.13	chr18	+	12578	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGGTTGCCATT	NA	False	NA	4	True	ATTAAA	-15	NA	34353961	34455243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.14	chr18	+	9964	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-14	-2612	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAAAATTTATTTTTAT	NA	False	NA	22	True	AATAAA	-33	NA	34353962	34452630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.15	chr18	+	9482	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-11	-2788	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	21.8974884404582	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGAAATTGGTATTTG	NA	False	NA	15	True	AATAAA	-20	NA	34353965	34452454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.16	chr18	+	9741	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	-71	3141	-11	-2778	multi-exon	FALSE	canonical	3	36	junction_11	20.0838243370131	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTGAGGGTC	NA	False	NA	25	True	AATAAA	-30	NA	34353965	34452464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.17	chr18	+	9849	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-11	-2619	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353965	34452623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.18	chr18	+	9566	18	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-10	-2617	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	25.6176301749117	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATTCCTAAAATTTATT	NA	False	NA	17	True	AATAAA	-28	NA	34353966	34452625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34451080_34451468
ES.16295.19	chr18	+	9378	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-8	-2784	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	29.2744864268454	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATTGGTATTTGTTTG	NA	False	NA	19	True	AATAAA	-24	NA	34353968	34452458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.2	chr18	+	8006	19	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-27	-2789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.3492228998197	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTGAAATTGGTATTT	NA	False	NA	14	True	AATAAA	-19	NA	34353949	34452453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34449436_34450840_34451080_34451468
ES.16295.20	chr18	+	9633	15	NIC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-8	-2778	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	28.5999857285536	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTGAGGGTC	NA	False	NA	25	True	AATAAA	-30	NA	34353968	34452464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.21	chr18	+	12267	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	21.8974884404582	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGAAGGTTGCCATT	NA	False	NA	4	True	ATTAAA	-15	NA	34353969	34455243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.23	chr18	+	9530	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	-7	-2631	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	29.2744864268454	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTGACACTTAACCAT	NA	False	NA	3	True	AATAAA	-14	NA	34353969	34452611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.25	chr18	+	7932	18	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	1	-2781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.064744861184	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGTATTTGTTTGAGG	NA	False	NA	22	True	AATAAA	-27	NA	34353977	34452461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34449436_34450840_34451080_34451468
ES.16295.26	chr18	+	1018	5	ISM	ENSMUSG00000005871.16	ENSMUST00000170023.8	1825	11	-59	27503	-30	-3892	5prime_fragment	FALSE	canonical	3	88	junction_2	8.5146931829632	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCGTTGTTGTTGTTCT	NA	False	NA	NA	False	AATACA	-13	NA	34354006	34405752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491
ES.16295.27	chr18	+	8829	11	NIC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	10	-2790	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	30.7154684157673	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACTGAAATTGGTATT	NA	False	NA	13	True	AATAAA	-18	NA	34354046	34452452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.28	chr18	+	1903	1	Intergenic	novelGene_13595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGTTAGGCCTCTTAC	NA	False	NA	NA	False	NA	NA	NA	34383305	34385208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34383300_34385200
ES.16295.29	chr18	+	9160	14	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	20598	-2793	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	26.3443289654349	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATTACTGAAATTGGT	NA	False	NA	10	True	AATAAA	-15	NA	34401348	34452449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.3	chr18	+	9810	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-26	-2778	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTGAGGGTC	NA	False	NA	25	True	AATAAA	-30	NA	34353950	34452464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.30	chr18	+	11430	12	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	24764	-2615	intron_retention	FALSE	canonical	3	68	junction_6	15.5648470217319	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCTAAAATTTATTTT	NA	False	NA	19	True	AATAAA	-30	NA	34405514	34452627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.31	chr18	+	8916	12	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	24813	-2619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.0774821226683	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34405563	34452623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431589_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.32	chr18	+	8773	12	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-23389	-2778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	34.9608990560872	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTGAGGGTC	193	False	NA	25	True	AATAAA	-30	NA	34409629	34452464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34447622_34447669
ES.16295.33	chr18	+	6924	2	NNC	ENSMUSG00000005871.16	novel	2633	3	NA	NA	10830	-2786	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAATTGGTATTTGTT	NA	False	NA	17	True	AATAAA	-22	NA	34445143	34452456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34451080_34451468
ES.16295.34	chr18	+	7517	1	ISM	ENSMUSG00000005871.16	ENSMUST00000115781.10	12346	16	91371	2318	11094	-2318	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGTAAGGCAGATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	34445407	34452924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34445400_34452900
ES.16295.35	chr18	+	2125	1	Genic_Genomic	ENSMUSG00000005871.16	novel	NA	NA	NA	NA	20553	1386	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34454866	34456991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_34454900_34457000
ES.16295.4	chr18	+	9223	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-25	-2618	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	32.6666400935266	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATTCCTAAAATTTAT	NA	False	NA	16	True	AATAAA	-27	NA	34353951	34452624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34451080_34451468
ES.16295.5	chr18	+	9513	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-25	-2631	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	29.0578625332284	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTGACACTTAACCAT	NA	False	NA	3	True	AATAAA	-14	NA	34353951	34452611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057_34451080_34451468
ES.16295.6	chr18	+	9918	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	-85	2978	-25	-2615	multi-exon	FALSE	canonical	3	36	junction_11	20.0838243370131	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCTAAAATTTATTTT	NA	False	NA	19	True	AATAAA	-30	NA	34353951	34452627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.7	chr18	+	9439	16	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-24	-2790	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	26	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACTGAAATTGGTATT	NA	False	NA	13	True	AATAAA	-18	NA	34353952	34452452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.8	chr18	+	9668	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-24	-2615	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	21.8974884404582	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCTAAAATTTATTTT	NA	False	NA	19	True	AATAAA	-30	NA	34353952	34452627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ES.16295.9	chr18	+	9986	16	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	-24	-2790	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.9137869278777	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACTGAAATTGGTATT	NA	False	NA	13	True	AATAAA	-18	NA	34353952	34452452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34444813
ES.16296.1	chr18	-	6404	17	Antisense	novelGene_ENSMUSG00000005871.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGCGGGCAGTGCGCAC	NA	False	NA	NA	False	NA	NA	NA	34449379	34353968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_34354328_34394055_34394209_34401348_34401430_34402106_34402306_34405489_34405601_34409615_34409730_34412321_34412404_34422888_34422994_34429081_34429181_34431776_34431856_34433019_34433111_34434309_34434367_34437633_34437774_34438616_34438700_34439317_34439429_34443742_34443958_34445054
ES.16296.2	chr18	-	1433	1	Intergenic	novelGene_13594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTAAGAAAAAGAATATAG	NA	False	NA	NA	False	NA	NA	NA	34376315	34374882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34374900_34376300
ES.16296.3	chr18	-	206	1	Intergenic	novelGene_13596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGACAAGTCTATGAA	NA	False	NA	NA	False	NA	NA	NA	34417329	34417123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34417100_34417300
ES.16296.4	chr18	-	2675	1	Antisense	novelGene_ENSMUSG00000005871.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACGATATGTTTAAC	NA	False	NA	NA	False	AGTAAA	-13	NA	34439823	34437148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_34437100_34439800
ES.16297.1	chr18	+	177	1	Intergenic	novelGene_13597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAATACTAAGT	NA	False	NA	NA	False	NA	NA	NA	34463632	34463809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34463600_34463800
ES.16297.10	chr18	+	1028	6	FSM	ENSMUSG00000014504.17	ENSMUST00000142010.2	956	6	-27	-45	4	-1	multi-exon	FALSE	canonical	3	34	junction_2	757.224141189384	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	3	True	AATAAA	-13	NA	34464201	34469651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34464313_34464802_34464879_34465958_34466116_34467345_34467418_34467509_34467622_34469151
ES.16297.11	chr18	+	4127	2	NIC	ENSMUSG00000014504.17	novel	3295	4	NA	NA	4	-978	intron_retention	FALSE	canonical	3	833	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTAATTGATATGAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	34464201	34468420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34467418_34467509
ES.16297.12	chr18	+	696	6	NNC	ENSMUSG00000014504.17	novel	956	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	665.584555109266	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTGTTCATCTTTA	NA	False	NA	-44	True	AATAAA	-10	NA	34464210	34469604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151_34469420_34469538
ES.16297.13	chr18	+	3762	3	NIC	ENSMUSG00000014504.17	novel	3295	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	833	junction_1	628.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTGTTCATCTTTA	NA	False	NA	-44	True	AATAAA	-10	NA	34464220	34469604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34467418_34467509_34467622_34469151
ES.16297.14	chr18	+	4773	3	ISM	ENSMUSG00000014504.17	ENSMUST00000140279.8	3295	4	52	0	21	0	intron_retention	FALSE	canonical	3	833	junction_2	68	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTGTTCATCTTTA	NA	False	NA	-44	True	AATAAA	-10	NA	34464249	34469604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34464313_34464802_34467418_34467509
ES.16297.2	chr18	+	3634	4	NIC	ENSMUSG00000014504.17	novel	772	5	NA	NA	-142	-1	intron_retention	FALSE	canonical	0	0	junction_1	859.071721232996	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	3	True	AATAAA	-13	NA	34463757	34469651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34464165_34464802_34467418_34467509_34467622_34469151
ES.16297.3	chr18	+	882	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	-7	1	-7	-1	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	3	True	AATAAA	-13	NA	34464190	34469651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ES.16297.4	chr18	+	5416	1	Genic_Genomic	ENSMUSG00000014504.17	novel	NA	NA	NA	NA	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTCATCTTTAAG	NA	False	NA	-42	True	AATAAA	-12	NA	34464190	34469606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_34464200_34469600
ES.16297.5	chr18	+	1132	5	NNC	ENSMUSG00000014504.17	novel	876	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	739.615229359158	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGTAGCTTTCACTTA	NA	False	NA	3	True	AATAAA	-13	NA	34464191	34469651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34464564_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ES.16297.6	chr18	+	1313	4	ISM	ENSMUSG00000014504.17	ENSMUST00000126518.8	772	5	299	-202	1	-4	3prime_fragment	FALSE	canonical	3	833	junction_2	569.422514482875	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACATTTTGTTCATC	NA	False	NA	-48	True	AATAAA	-6	NA	34464198	34469600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34464879_34467345_34467418_34467509_34467622_34469151
ES.16297.7	chr18	+	4549	1	NIC	ENSMUSG00000014504.17	novel	772	5	NA	NA	4	-648	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAAAAAAAAAGTGAC	NA	False	NA	NA	False	AGTAAA	-33	NA	34464201	34468750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34464200_34468800
ES.16297.8	chr18	+	4472	2	NIC	ENSMUSG00000014504.17	novel	3295	4	NA	NA	4	-633	intron_retention	FALSE	canonical	3	833	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTTTTATAGTTAGAT	NA	False	NA	NA	False	NA	NA	NA	34464201	34468765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34467418_34467509
ES.16297.9	chr18	+	3339	4	FSM	ENSMUSG00000014504.17	ENSMUST00000140279.8	3295	4	4	-48	4	0	multi-exon	FALSE	canonical	3	833	junction_2	563.243188053694	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464201	34469652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34464313_34464802_34467418_34467509_34467622_34469151
ES.16298.1	chr18	+	177	1	Intergenic	novelGene_13599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	34488955	34489132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34489000_34489100
ES.16299.1	chr18	-	2984	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-121	-11	-121	11	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTTATTACATTGTG	5440	False	NA	4	True	AATAAA	-38	NA	34506543	34477926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ES.16299.2	chr18	-	5310	4	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	517	junction_3	24.5809320861155	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTAAAATGTTGTTTT	5569	False	NA	-7	True	AATAAA	-27	NA	34506414	34477937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34482857_34490144_34490284_34505457_34505552_34506256
ES.16299.3	chr18	-	2563	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-40	329	-40	-329	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTAAATGTCCCAAAG	5521	False	NA	92	True	TATAAA	-18	NA	34506462	34478266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ES.16299.4	chr18	-	905	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	-156	2103	-156	4	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTGTCGTAT	5405	False	NA	-1	True	ATTAAA	-22	NA	34506578	34480040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ES.16299.5	chr18	-	739	5	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	409	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	235.64698173327	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTTTGCCTTTGTTG	5970	False	NA	-7	True	ATTAAA	-16	NA	34506013	34480046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34505851
ES.16299.7	chr18	-	623	4	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	-24	-7	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	233.445687235573	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAAGCTGCTTTGCCTT	5537	False	NA	-12	True	ATTAAA	-11	NA	34506446	34480051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34480222_34482687_34482857_34505457_34505552_34506256
ES.16299.8	chr18	-	180	1	Intergenic	novelGene_13598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAATGGGTGGT	4151	False	NA	NA	False	NA	NA	NA	34487366	34487186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34487200_34487400
ES.163.1	chr1	-	191	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	19322384	19322193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_19322200_19322400
ES.1630.1	chr1	+	1973	5	Antisense	novelGene_ENSMUSG00000100627.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTACGTCCAAGACCTG	NA	False	NA	NA	False	AATAAA	-17	NA	153972082	153992547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_153972314_153980782_153980821_153988037_153988083_153988624_153988769_153991032
ES.16300.1	chr18	+	174	1	Intergenic	novelGene_13600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAATAAA	NA	False	NA	NA	False	NA	NA	NA	34525652	34525826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34525700_34525800
ES.16301.1	chr18	+	179	1	Intergenic	novelGene_13601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGAGAGAAAGAA	1923	False	NA	NA	False	NA	NA	NA	34544250	34544429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34544200_34544400
ES.16302.1	chr18	+	179	1	Intergenic	novelGene_13602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTGTT	NA	False	NA	NA	False	NA	NA	NA	34603866	34604045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34603900_34604000
ES.16303.1	chr18	+	2222	1	Intergenic	novelGene_13603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAACTTAGCCAGCAGTG	NA	False	NA	NA	False	AAAAAG	-37	NA	34606904	34609126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34606900_34609100
ES.16304.1	chr18	+	176	1	Intergenic	novelGene_13604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34611382	34611558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34611400_34611600
ES.16305.1	chr18	+	3439	1	Antisense	novelGene_ENSMUSG00000036501.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGTTTATTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	34621160	34624599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34621200_34624600
ES.16305.2	chr18	+	1236	1	Intergenic	novelGene_13606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCCAGAGGGACAGAAA	NA	False	NA	NA	False	NA	NA	NA	34621160	34622396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34621200_34622400
ES.16306.1	chr18	-	9063	1	Genic_Genomic	ENSMUSG00000036501.8	novel	NA	NA	NA	NA	7502	7478	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAATGTAATTAAT	2113	False	NA	NA	False	NA	NA	NA	34576988	34567925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_34567900_34577000
ES.16306.10	chr18	-	5190	23	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	3	1780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	16.1678310335857	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	-27	True	AATAAA	-19	NA	34639873	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34597290_34597390_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.11	chr18	-	4570	19	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	46	1779	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	11.032639566417	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTGTAAATGTATGTT	NA	False	NA	-28	True	AATAAA	-18	NA	34639811	34573624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627747_34632738_34632906_34639581
ES.16306.12	chr18	-	5154	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	-32	-1778	-24	1778	multi-exon	FALSE	canonical	2	10	junction_18	10.452152888281	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639908	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.13	chr18	-	5032	21	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-28	1778	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	13.0245921241319	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639912	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.14	chr18	-	5311	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1778	intron_retention	FALSE	canonical	0	0	junction_13	13.9088843446163	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639868	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34613507_34613651_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.15	chr18	-	9204	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1778	intron_retention	FALSE	canonical	3	9	junction_15	11.4871962928454	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639868	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.16	chr18	-	4971	20	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-33	1778	combination_of_known_splicesites	FALSE	canonical	3	10	junction_18	9.19412072770848	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639917	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.17	chr18	-	5226	19	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-42	1778	intron_retention	FALSE	canonical	3	10	junction_17	9.32142096940637	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639926	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.18	chr18	-	5358	11	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1869	1778	combination_of_known_junctions	FALSE	canonical	3	3	junction_10	11.7392504019635	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	1503	False	NA	-29	True	AATAAA	-17	NA	34594391	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409
ES.16306.19	chr18	-	5237	22	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-11	1778	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_16	12.0075561999806	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639895	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.2	chr18	-	5447	20	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-3	2292	combination_of_known_splicesites	FALSE	canonical	3	10	junction_18	9.19412072770848	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTGGAAGTTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	34639879	34573111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.21	chr18	-	6182	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1778	intron_retention	FALSE	canonical	0	0	junction_11	13.4864248972697	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639868	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34597290_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.22	chr18	-	2489	1	Genic_Genomic	ENSMUSG00000036501.8	novel	NA	NA	NA	NA	8376	1778	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	2987	False	NA	-29	True	AATAAA	-17	NA	34576114	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_34573600_34576100
ES.16306.23	chr18	-	7384	21	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-42	1778	intron_retention	FALSE	canonical	1	3	junction_10	13.82570070557	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34639926	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.24	chr18	-	5457	19	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	62	1778	intron_retention	FALSE	canonical	1	1	junction_13	14.541978400564	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGTAAATGTATGT	NA	False	NA	-29	True	AATAAA	-17	NA	34630529	34573625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34597215_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386
ES.16306.25	chr18	-	6181	23	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1	1777	intron_retention	FALSE	canonical	0	0	junction_13	15.5210467611558	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639856	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34597290_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.26	chr18	-	5569	20	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-19	1777	intron_retention	FALSE	canonical	2	10	junction_18	9.19412072770848	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639903	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34631213_34632738_34632906_34639581
ES.16306.27	chr18	-	4562	19	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-471	1777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	14.5983256269721	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34627718	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34597290_34597614_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651
ES.16306.28	chr18	-	4886	19	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-14	1777	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	11.8140165758442	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639898	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.29	chr18	-	5032	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1	1777	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	11.2338773359869	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639883	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.3	chr18	-	5289	23	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1	1784	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	15.2513378359121	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAATGTATGTTTGTTT	NA	False	NA	-23	True	AATAAA	-23	NA	34639883	34573619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581167_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.30	chr18	-	4770	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-1894	1777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	15.1803561650048	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34632850	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34625848_34626157_34627209_34627352_34627651_34627830_34632738
ES.16306.31	chr18	-	5119	22	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-20	1777	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	13.9948160146337	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639904	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.32	chr18	-	5634	21	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-18	1777	intron_retention	FALSE	canonical	1	3	junction_10	13.0245921241319	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639902	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34631213_34632738_34632906_34639581
ES.16306.33	chr18	-	4723	19	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1	1777	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	10.6939754586922	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639883	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34632738_34632906_34639581
ES.16306.34	chr18	-	7340	18	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-11	1777	intron_retention	FALSE	canonical	3	10	junction_16	9.4605354025978	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGTAAATGTATG	NA	False	NA	-30	True	AATAAA	-16	NA	34639895	34573626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.35	chr18	-	4329	19	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-5166	1441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	13.1383897015813	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTATTTGAGTACAAT	7450	False	NA	NA	False	AATATA	-18	NA	34645050	34573962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34632738_34632906_34644806
ES.16306.36	chr18	-	4468	23	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	970	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	14.2907384907698	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTGAGGAAAGCATGAA	NA	False	NA	NA	False	AATAAA	-23	NA	34639868	34574433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.37	chr18	-	10795	16	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_13	12.9655954998861	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTTTCTTTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	34639868	34575402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627736_34630386_34630600_34632738_34632906_34639581
ES.16306.38	chr18	-	6110	15	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-46	1	intron_retention	FALSE	canonical	0	0	junction_11	14.4301625713896	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTTTCTTTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	34627293	34575402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34595262_34596013_34596063_34597290_34598274_34606602_34606739_34620031_34620193_34627209
ES.16306.39	chr18	-	3877	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_12	14.6576771693198	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTTTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	34639895	34575404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34597290_34597390_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34631208_34632738_34632906_34639581
ES.16306.4	chr18	-	4833	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2	1783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.0069232106377	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTAAATGTATGTTTGTT	NA	False	NA	-24	True	AATAAA	-22	NA	34639868	34573620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627736_34630386_34630600_34632738_34632906_34639581
ES.16306.40	chr18	-	3261	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.7132804578519	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTTTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	34639888	34575404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627736_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.41	chr18	-	3998	12	ISM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	41610	1	-2	0	intron_retention	FALSE	canonical	3	35	junction_8	4.35605401844034	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTTTTTTCTTTTG	7162	False	NA	NA	False	AATAAA	-15	NA	34598266	34575404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013
ES.16306.42	chr18	-	3145	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	11.2338773359869	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTTTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	34639774	34575404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.43	chr18	-	3570	10	ISM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	46975	2	3359	-1	3prime_fragment	FALSE	canonical	3	35	junction_8	4.59468291736341	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTGTTTTTTCTTTT	2993	False	NA	NA	False	AATAAA	-14	NA	34592901	34575405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716
ES.16306.44	chr18	-	3003	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-3	167	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	11.2338773359869	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGCTTGGCTGTA	NA	False	NA	NA	False	CATAAA	-24	NA	34639869	34575641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.45	chr18	-	3096	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	8	240	-2	165	multi-exon	FALSE	canonical	2	10	junction_18	10.452152888281	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCATGTGTGCTTGGCTG	NA	False	NA	NA	False	CATAAA	-22	NA	34639868	34575643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.46	chr18	-	3065	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-31	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.7132804578519	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCACCATGTGTGCTT	NA	False	NA	NA	False	CATAAA	-17	NA	34639915	34575648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627757_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ES.16306.47	chr18	-	4760	10	ISM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	45542	245	1926	160	3prime_fragment	FALSE	canonical	3	35	junction_8	4.59468291736341	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCACCATGTGTGCTT	1560	False	NA	NA	False	CATAAA	-17	NA	34594334	34575648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716
ES.16306.48	chr18	-	3563	21	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	1	130	intron_retention	FALSE	canonical	1	3	junction_10	13.0245921241319	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACGCCATAAAGTGCTT	NA	False	NA	NA	False	TATAAA	-16	NA	34639883	34575678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34592409_34592476_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34631213_34632738_34632906_34639581
ES.16306.49	chr18	-	3015	10	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	89	127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	16.8354417454795	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGACGCCATAAAGTG	NA	False	NA	NA	False	TATAAA	-13	NA	34630502	34575681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34592009_34629792
ES.16306.5	chr18	-	7170	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	4	1780	intron_retention	FALSE	canonical	3	9	junction_15	11.4654726772127	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	-27	True	AATAAA	-19	NA	34639872	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34598274_34606602_34606739_34620031_34620193_34624069_34624166_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
ES.16306.50	chr18	-	176	1	Intergenic	novelGene_13605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34612362	34612186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34612200_34612400
ES.16306.51	chr18	-	2808	1	Genic_Genomic	ENSMUSG00000036501.8	novel	NA	NA	NA	NA	-2094	-11245	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGGTGGTTTATTCCG	9774	False	NA	NA	False	NA	NA	NA	34641978	34639170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_34639200_34642000
ES.16306.6	chr18	-	5068	21	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-5161	1780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.6514821266127	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	7455	False	NA	-27	True	AATAAA	-19	NA	34645045	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34644806
ES.16306.7	chr18	-	7976	11	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-2295	1780	intron_retention	FALSE	canonical	1	1	junction_4	12.4080618953969	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	4869	False	NA	-27	True	AATAAA	-19	NA	34600559	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013
ES.16306.8	chr18	-	4682	18	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-24	1780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.8685125133573	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	-27	True	AATAAA	-19	NA	34639908	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581424_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34632738_34632906_34639581
ES.16306.9	chr18	-	5759	20	NNC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	-1938	1780	intron_retention	FALSE	canonical	0	0	junction_12	12.9424466468963	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	-27	True	AATAAA	-19	NA	34632894	34573623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34597267_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738
ES.16307.1	chr18	+	205	2	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATCTCAAACACAAAGGA	NA	False	NA	NA	False	AAAAAG	-5	NA	34647742	34732841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34647813_34732706
ES.16307.2	chr18	+	155	1	Intergenic	novelGene_13607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34672349	34672504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34672300_34672500
ES.16307.3	chr18	+	172	1	Intergenic	novelGene_13608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAGACAGGCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	34691267	34691439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34691300_34691400
ES.16307.4	chr18	+	162	1	Intergenic	novelGene_13610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATTAAAAAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	34706196	34706358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34706200_34706400
ES.16307.5	chr18	+	206	1	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATCTCAAACACAAAGGA	NA	False	NA	NA	False	AAAAAG	-5	NA	34732635	34732841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34732600_34732800
ES.16308.1	chr18	+	169	1	Intergenic	novelGene_13611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	34738006	34738175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34738000_34738200
ES.16309.1	chr18	+	3190	2	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTGGTGGTGGGGCAC	NA	False	NA	NA	False	NA	NA	NA	34740740	34745112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34743001_34744182
ES.1631.1	chr1	-	177	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	154030850	154030673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_154030700_154030800
ES.16310.1	chr18	+	1618	6	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGTAATA	NA	False	NA	NA	False	AAAAAG	-14	NA	34745372	34757018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_34746154_34746267_34746349_34747499_34747626_34747801_34747851_34749717_34749787_34756506
ES.16311.1	chr18	+	3818	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	-585	441	-463	1	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGACAGAAAATTGATAT	5392	False	NA	54	True	TATAAA	-3	NA	34757202	34765889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.10	chr18	+	2945	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-77	-1	intron_retention	FALSE	canonical	0	0	junction_2	344.792552589217	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6172	False	NA	21	True	AATAAA	-18	NA	34757982	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758691_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762533_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.11	chr18	+	3114	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-45	0	intron_retention	FALSE	canonical	3	938	junction_12	101.310854666992	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6204	False	NA	22	True	AATAAA	-19	NA	34758014	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.13	chr18	+	2968	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-45	0	intron_retention	FALSE	canonical	1	5	junction_9	259.76530836911	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6204	False	NA	22	True	AATAAA	-19	NA	34758014	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761943_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.14	chr18	+	4406	12	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	938	junction_9	101.749246144181	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6205	False	NA	21	True	AATAAA	-18	NA	34758015	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34760745_34760837_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762644_34763054_34763220_34763339_34763678_34764198_34765117_34765353
ES.16311.15	chr18	+	3609	17	NIC	ENSMUSG00000003779.17	novel	2945	19	NA	NA	-44	0	intron_retention	FALSE	canonical	3	938	junction_11	102.959867788377	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6205	False	NA	22	True	AATAAA	-19	NA	34758015	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.17	chr18	+	2972	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-44	0	intron_retention	FALSE	canonical	0	0	junction_6	260.705695903529	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6205	False	NA	22	True	AATAAA	-19	NA	34758015	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761031_34761111_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.18	chr18	+	2982	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-43	0	intron_retention	FALSE	canonical	0	0	junction_8	260.712941094839	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6206	False	NA	22	True	AATAAA	-19	NA	34758016	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761643_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.19	chr18	+	2965	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-43	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	260.832954679645	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6206	False	NA	21	True	AATAAA	-18	NA	34758016	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764204_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.2	chr18	+	4182	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-463	-1	intron_retention	TRUE	canonical	3	938	junction_12	96.6447495338301	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	5392	False	NA	21	True	AATAAA	-18	NA	34757202	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.21	chr18	+	4064	13	NIC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	-43	-2	intron_retention	FALSE	canonical	3	938	junction_8	103.592417139909	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGATTCCAAATTTA	6206	False	NA	20	True	AATAAA	-17	NA	34758016	34765855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758695_34759768_34759859_34759947_34760068_34760605_34761026_34761105_34761236_34761437_34761633_34761727_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764666_34764978_34765117_34765353
ES.16311.22	chr18	+	3175	19	FSM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	-69	1	-43	0	multi-exon	FALSE	canonical	3	116	junction_1	232.455445087047	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6206	False	NA	22	True	AATAAA	-19	NA	34758016	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.23	chr18	+	3424	19	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-43	-4	intron_retention	FALSE	canonical	1	1	junction_7	260.606823906564	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGATTCCAAATT	6206	False	NA	18	True	AATAAA	-15	NA	34758016	34765853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761476_34761557_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.26	chr18	+	3060	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-42	0	intron_retention	FALSE	canonical	3	938	junction_12	93.71114419701	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6207	False	NA	22	True	AATAAA	-19	NA	34758017	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.28	chr18	+	3374	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	938	junction_13	100.655798858039	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6211	False	NA	21	True	AATAAA	-18	NA	34758021	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763678_34764198_34764395_34764573_34765117_34765353
ES.16311.29	chr18	+	2965	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-38	0	intron_retention	FALSE	canonical	0	0	junction_1	256.985474201592	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6211	False	NA	22	True	AATAAA	-19	NA	34758021	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758118_34758516_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.3	chr18	+	3815	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-462	-1	intron_retention	FALSE	canonical	0	0	junction_13	260.453995843061	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	5393	False	NA	21	True	AATAAA	-18	NA	34757203	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763308_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.30	chr18	+	4676	12	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	938	junction_9	108.741637847022	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6212	False	NA	21	True	AATAAA	-18	NA	34758022	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34761026_34761105_34761236_34761437_34761633_34761727_34762338_34762477_34762644_34763054_34763220_34763339_34764666_34764978_34765117_34765353
ES.16311.31	chr18	+	3122	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-36	6	intron_retention	FALSE	canonical	3	945	junction_13	97.8294186618184	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAAATTGATATAAATA	6213	False	NA	59	True	TATAAA	-8	NA	34758023	34765894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.32	chr18	+	3916	14	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_7	298.272362727196	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6213	False	NA	22	True	AATAAA	-19	NA	34758023	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762003_34762193_34762644_34763054_34763220_34763339_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.34	chr18	+	2750	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-33	-2	intron_retention	FALSE	canonical	0	0	junction_2	270.373324081722	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGATTCCAAATTTA	6216	False	NA	20	True	AATAAA	-17	NA	34758026	34765855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.37	chr18	+	4435	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	240	-1001	-32	1001	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGTACTATTTCACA	6217	False	NA	NA	False	AATAAA	-21	NA	34758027	34767331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.38	chr18	+	2947	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-31	-1	intron_retention	FALSE	canonical	2	18	junction_13	256.619812943315	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6218	False	NA	21	True	AATAAA	-18	NA	34758028	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763351_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.39	chr18	+	3589	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	938	junction_11	103.637118561595	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6219	False	NA	21	True	AATAAA	-18	NA	34758029	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.4	chr18	+	3564	19	FSM	ENSMUSG00000003779.17	ENSMUST00000167161.9	3146	19	-449	31	-449	0	multi-exon	FALSE	canonical	3	115	junction_1	232.664995218447	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	5406	False	NA	22	True	AATAAA	-19	NA	34757216	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34757906_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.40	chr18	+	2940	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-25	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	260.712941094839	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGATTCCAAATT	6224	False	NA	18	True	AATAAA	-15	NA	34758034	34765853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761737_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.41	chr18	+	3631	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	938	junction_11	103.799818611354	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6224	False	NA	21	True	AATAAA	-18	NA	34758034	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.42	chr18	+	3582	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-25	0	intron_retention	FALSE	canonical	3	938	junction_11	96.2321412003287	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6224	False	NA	23	True	AATAAA	-20	NA	34758034	34765858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.44	chr18	+	3700	16	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-24	0	intron_retention	FALSE	canonical	3	945	junction_11	95.2441074292788	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6225	False	NA	22	True	AATAAA	-19	NA	34758035	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.46	chr18	+	4127	14	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	938	junction_10	101.158964480043	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6225	False	NA	21	True	AATAAA	-18	NA	34758035	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762644_34763054_34763220_34763339_34763678_34764198_34764395_34764573_34765117_34765353
ES.16311.49	chr18	+	2938	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_5	259.513273049547	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6233	False	NA	22	True	AATAAA	-19	NA	34758043	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.5	chr18	+	3624	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-445	0	intron_retention	FALSE	canonical	3	10	junction_10	266.201994226384	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	5410	False	NA	22	True	AATAAA	-19	NA	34757220	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.51	chr18	+	2927	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	2	junction_1	256.559098430857	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGATTCCAAATTTA	6241	False	NA	20	True	AATAAA	-17	NA	34758051	34765855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758106_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.52	chr18	+	3405	18	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	5	-1	intron_retention	FALSE	canonical	1	6	junction_10	267.05208594766	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6254	False	NA	21	True	AATAAA	-18	NA	34758064	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762533_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.54	chr18	+	3888	14	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_8	305.951517990918	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6260	False	NA	23	True	AATAAA	-20	NA	34758070	34765858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761236_34761437_34761633_34761727_34761840_34761937_34762003_34762193_34762644_34763054_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.56	chr18	+	3129	17	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	963	junction_8	96.4985224951657	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6263	False	NA	21	True	AATAAA	-18	NA	34758073	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.57	chr18	+	2739	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	293	642	-5	-169	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGTTGCCCTGAGGTT	6270	False	NA	NA	False	ACTAAA	-20	NA	34758080	34765688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.58	chr18	+	3002	20	NNC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_1	316.74900713026	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGATTCCAAATTTAG	6271	False	NA	21	True	AATAAA	-18	NA	34758081	34765856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758220_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.59	chr18	+	3711	15	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	1	-6	intron_retention	FALSE	canonical	3	938	junction_10	98.0163459920469	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATTTGGATTCCAAA	6276	False	NA	16	True	AATAAA	-13	NA	34758086	34765851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.6	chr18	+	3825	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	36	0	intron_retention	FALSE	canonical	3	938	junction_12	101.336911094492	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	5891	False	NA	22	True	AATAAA	-19	NA	34757701	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.61	chr18	+	3854	15	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	5	-4	intron_retention	FALSE	canonical	3	938	junction_10	104.950133931524	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGATTCCAAATT	6280	False	NA	18	True	AATAAA	-15	NA	34758090	34765853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762644_34763054_34763220_34763339_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.62	chr18	+	2989	19	NNC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	21	0	intron_retention	FALSE	canonical	1	43	junction_1	247.843364513423	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6296	False	NA	22	True	AATAAA	-19	NA	34758106	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758221_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.63	chr18	+	4529	13	NIC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	21	-2	intron_retention	FALSE	canonical	3	116	junction_1	266.031783293317	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGATTCCAAATTTA	6296	False	NA	20	True	AATAAA	-17	NA	34758106	34765855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34758317_34758510_34758695_34759768_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34765117_34765353
ES.16311.64	chr18	+	2970	19	NNC	ENSMUSG00000003779.17	novel	3107	19	NA	NA	128	-5	intron_retention	FALSE	non_canonical	0	0	junction_14	325.426823239804	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTTGGATTCCAAAT	6403	False	NA	17	True	AATAAA	-14	NA	34758213	34765852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763474_34763571_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.65	chr18	+	2873	18	NNC	ENSMUSG00000003779.17	novel	3146	19	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_14	264.434998652052	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6699	False	NA	22	True	AATAAA	-19	NA	34758509	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764201_34764395_34764573_34764666_34764978_34765117_34765353
ES.16311.67	chr18	+	1046	7	ISM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	4441	647	551	-646	internal_fragment	FALSE	canonical	3	938	junction_2	90.3906644638827	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCAGGCAGGCACTCTA	2972	False	NA	NA	False	AATAAA	-36	NA	34762526	34765211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978
ES.16311.8	chr18	+	3041	19	NNC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	-79	0	intron_retention	FALSE	canonical	0	0	junction_16	256.900813112333	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	6170	False	NA	22	True	AATAAA	-19	NA	34757980	34765857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764540_34764666_34764978_34765117_34765353
ES.16312.1	chr18	-	211	1	Intergenic	novelGene_13609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGAGATCTTATTTGTA	3414	False	NA	NA	False	NA	NA	NA	34700445	34700234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34700200_34700400
ES.16313.1	chr18	-	3484	2	ISM	ENSMUSG00000049357.12	ENSMUST00000129566.2	2212	7	1097	9892	1097	-9892	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAATAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	34729301	34722889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34726114_34729041
ES.16314.1	chr18	-	4536	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-277	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.962222887896	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTATGACCCTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	34757931	34731661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.10	chr18	-	9572	17	NNC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	174.514863263849	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757653	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34740545_34740827_34743003_34744184_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.100	chr18	-	8955	15	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	148	junction_8	129.411856378883	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAACTCTGGCCTTTG	NA	False	NA	-9	True	NA	NA	NA	34757617	34732886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34740545_34740827_34743003_34744184_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.102	chr18	-	4640	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	-4	intron_retention	FALSE	canonical	1	2	junction_1	173.664557940897	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAACTCTGGCCTTTG	NA	False	NA	-9	True	NA	NA	NA	34757626	34732886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34733659_34733902_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.103	chr18	-	4646	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	16	-5	intron_retention	FALSE	canonical	0	0	junction_14	195.035830571235	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAACTCTGGCCTTT	NA	False	NA	-10	True	NA	NA	NA	34757638	34732887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34744477_34744544_34744805_34744977_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.104	chr18	-	4407	21	NNC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-17	-5	intron_retention	FALSE	canonical	2	11	junction_8	171.841642217479	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAACTCTGGCCTTT	NA	False	NA	-10	True	NA	NA	NA	34757624	34732887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.105	chr18	-	4616	19	NIC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	50	junction_7	142.766504094476	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAAACTCTGGCCTT	NA	False	NA	-11	True	NA	NA	NA	34757623	34732888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.106	chr18	-	2957	20	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	151.215151888509	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAAACTCTGGCCTT	NA	False	NA	-11	True	NA	NA	NA	34757626	34732888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.107	chr18	-	5332	10	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	15021	-6	intron_retention	FALSE	canonical	3	465	junction_9	68.6814079825766	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAAACTCTGGCCTT	8966	False	NA	-11	True	NA	NA	NA	34742585	34732888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34740545_34740827_34741109_34741470
ES.16314.108	chr18	-	3542	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-237	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	143.470224142222	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAGGAAAACTCTGGCC	NA	False	NA	-13	True	NA	NA	NA	34757891	34732890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740031_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.109	chr18	-	4140	19	NIC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	16	-8	intron_retention	FALSE	canonical	3	50	junction_7	159.211095214832	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAGGAAAACTCTGGCC	NA	False	NA	-13	True	NA	NA	NA	34757638	34732890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.11	chr18	-	5181	21	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-16	1	intron_retention	FALSE	non_canonical	0	0	junction_1	158.505394229976	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757623	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.110	chr18	-	5173	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	31	-1335	-16	-10	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGAAGGAAAACTCTGG	NA	False	NA	-15	True	NA	NA	NA	34757623	34732892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.111	chr18	-	3800	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	18	-10	intron_retention	FALSE	canonical	0	0	junction_14	147.675522684025	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGAAGGAAAACTCTGG	NA	False	NA	-15	True	NA	NA	NA	34757636	34732892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744347_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.114	chr18	-	2523	15	NIC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	11313	-13	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	196.362898112403	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATCAGAAGGAAAACTC	5258	False	NA	-18	True	NA	NA	NA	34746293	34732895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268
ES.16314.116	chr18	-	3379	14	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	13925	138	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_6	204.183552415279	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATTTCTATTCTTAC	7870	False	NA	NA	False	NA	NA	NA	34743681	34734089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462
ES.16314.118	chr18	-	3986	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	19	-136	19	136	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTATTTCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	34757635	34734091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.119	chr18	-	3867	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	34	-32	-13	32	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAGATTGAGATACCTG	NA	False	NA	NA	False	NA	NA	NA	34757620	34734195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.12	chr18	-	4276	24	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.185054449403	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757623	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749723_34749788_34756507_34756605_34757590
ES.16314.120	chr18	-	4362	19	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	12	-874	intron_retention	FALSE	canonical	3	43	junction_6	186.859861994735	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTCTTTGCTTGTG	NA	False	NA	1	True	NA	NA	NA	34757642	34735101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.121	chr18	-	3889	18	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	1002	-874	intron_retention	FALSE	canonical	3	148	junction_11	115.811653560192	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTCTTTGCTTGTG	NA	False	NA	1	True	NA	NA	NA	34756604	34735101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ES.16314.122	chr18	-	3035	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	-41	875	-41	-875	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTCTTTGCTTGT	NA	False	NA	0	True	NA	NA	NA	34757695	34735102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.123	chr18	-	2747	20	ISM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	28	2191	-19	-875	5prime_fragment	FALSE	canonical	3	148	junction_12	123.932695522169	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTCTTTGCTTGT	NA	False	NA	0	True	NA	NA	NA	34757626	34735102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.125	chr18	-	6367	5	ISM	ENSMUSG00000003778.15	ENSMUST00000153569.8	3325	7	4619	45	4571	-45	3prime_fragment	FALSE	canonical	3	436	junction_1	18.5876302954411	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-10	NA	34753035	34743359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717
ES.16314.126	chr18	-	8129	9	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	16	-45	intron_retention	FALSE	non_canonical	0	0	junction_7	195.09192544798	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-10	NA	34757638	34743359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34751964_34752020_34752921_34753433
ES.16314.127	chr18	-	6389	3	NNC	ENSMUSG00000003778.15	novel	1702	2	NA	NA	1	4272	intron_retention	FALSE	non_canonical	0	0	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATAGTTGATATTTAA	NA	False	NA	NA	False	TTTAAA	-40	NA	34757653	34750694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34751964_34752020_34752921_34753433
ES.16314.13	chr18	-	3792	21	NNC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.318212812449	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757621	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.14	chr18	-	4465	24	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.092036337485	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757623	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34733659_34733902_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.18	chr18	-	5755	25	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	222.831397242898	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGAACTAGTATGACC	NA	False	NA	NA	False	AATAAA	-16	NA	34757624	34731668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34744805_34744977_34745296_34745421_34745652_34745714_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.19	chr18	-	3949	21	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.563403739745	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGAACTAGTATGACC	NA	False	NA	NA	False	AATAAA	-16	NA	34757617	34731668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.2	chr18	-	4023	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.581005335765	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGTATGACCCTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	34757638	34731662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.20	chr18	-	4522	21	NNC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-237	4	intron_retention	FALSE	canonical	2	3	junction_20	172.052455663963	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757891	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.21	chr18	-	6682	18	NIC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-19	4	intron_retention	FALSE	canonical	3	50	junction_6	148.400934532914	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.22	chr18	-	3793	9	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	16635	4	intron_retention	FALSE	canonical	0	0	junction_5	258.381984666114	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	5918	False	NA	-1	True	NA	NA	NA	34740971	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737997_34738526_34738742_34739727_34739822_34740091_34740545_34740827
ES.16314.23	chr18	-	3420	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-265	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	141.509490672581	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757919	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.24	chr18	-	4611	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-220	4	intron_retention	FALSE	canonical	2	3	junction_22	185.633536618132	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757874	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.25	chr18	-	4089	20	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-19	4	intron_retention	FALSE	canonical	3	7	junction_6	160.627405615925	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738624_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.26	chr18	-	6439	20	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-237	4	intron_retention	FALSE	canonical	3	307	junction_19	96.5624107454607	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757891	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.27	chr18	-	5913	10	NIC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	13943	4	intron_retention	FALSE	canonical	3	50	junction_6	189.143684360153	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	7888	False	NA	-1	True	NA	NA	NA	34743663	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34740545_34740827_34741109_34741470_34743003_34743462
ES.16314.28	chr18	-	3323	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-226	4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	175.646108854012	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757880	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.29	chr18	-	4466	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	4	intron_retention	FALSE	canonical	0	0	junction_14	174.703415669849	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34745653_34745714_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.3	chr18	-	6386	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	4	intron_retention	FALSE	non_canonical	0	0	junction_1	139.981382690699	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAGTATGACCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34757620	34731663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ES.16314.31	chr18	-	5181	21	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-275	4	intron_retention	FALSE	canonical	2	3	junction_20	173.959765463167	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757929	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.32	chr18	-	6741	19	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	16	4	intron_retention	FALSE	canonical	3	307	junction_18	100.115057265918	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757638	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.33	chr18	-	3471	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	171.562779151198	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34733659_34733902_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.34	chr18	-	2812	20	NIC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	3	33	junction_11	157.643906028851	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757638	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.35	chr18	-	4425	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	19	4	intron_retention	FALSE	canonical	0	0	junction_6	144.557211857451	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757635	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738516_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.36	chr18	-	4564	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-232	4	intron_retention	FALSE	canonical	2	3	junction_21	141.417187292344	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757886	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.37	chr18	-	3205	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-269	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	157.158844785558	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757923	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757839
ES.16314.39	chr18	-	2965	20	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-19	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	159.031103771429	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.4	chr18	-	3890	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.382600346827	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAGTATGACCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34757623	34731663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741564_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.40	chr18	-	6383	20	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	12	4	intron_retention	FALSE	canonical	3	307	junction_19	97.8244229654939	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757642	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.41	chr18	-	4196	20	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	19	4	intron_retention	FALSE	canonical	3	148	junction_12	118.49401261216	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757635	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.42	chr18	-	3020	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	27	1211	-20	4	multi-exon	FALSE	canonical	3	33	junction_11	140.007142674936	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757627	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.44	chr18	-	4450	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	4	intron_retention	FALSE	canonical	0	0	junction_7	145.383381099767	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738786_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.45	chr18	-	4253	21	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	21	4	intron_retention	FALSE	canonical	3	43	junction_7	178.02176131024	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757633	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.46	chr18	-	6946	19	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-14	4	intron_retention	FALSE	canonical	1	1	junction_12	152.321014170812	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757621	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34743003_34743462_34743682_34744184_34744544_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.47	chr18	-	6580	22	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-272	4	intron_retention	FALSE	canonical	2	2	junction_21	189.184333437366	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757926	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757883
ES.16314.48	chr18	-	6163	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	19	4	intron_retention	FALSE	canonical	1	2	junction_1	198.605033127747	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757635	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34733659_34733902_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744544_34744805_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.49	chr18	-	6190	19	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-207	4	intron_retention	FALSE	canonical	3	148	junction_12	120.715830479664	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757861	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.51	chr18	-	3379	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	168.828574299495	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757638	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735539_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.52	chr18	-	3510	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-237	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	140.389222473978	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757891	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756621_34757590
ES.16314.53	chr18	-	4990	20	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	21	4	intron_retention	FALSE	canonical	2	11	junction_7	187.842982699872	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757633	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.54	chr18	-	4040	20	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	19	4	intron_retention	FALSE	canonical	2	4	junction_6	186.052445470018	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757635	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.55	chr18	-	3098	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	196.614590130423	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757637	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744327_34744480_34744544_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.56	chr18	-	3254	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	145.041631368142	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757626	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744347_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.58	chr18	-	3194	21	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	140.91802581643	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757638	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.59	chr18	-	2925	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	140.784374132927	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757617	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741637_34743568_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.6	chr18	-	7369	21	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-19	4	intron_retention	FALSE	canonical	0	0	junction_1	145.047397425807	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAGTATGACCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34757626	34731663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732632_34732844_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.60	chr18	-	2960	20	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	158.140703155323	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757623	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.61	chr18	-	7659	13	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	11471	4	intron_retention	FALSE	canonical	3	320	junction_11	98.2181528820185	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	5416	False	NA	-1	True	NA	NA	NA	34746135	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184
ES.16314.62	chr18	-	3181	21	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	142.329336399774	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757623	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.63	chr18	-	4435	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	15	4	intron_retention	FALSE	canonical	0	0	junction_17	145.254225411862	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757639	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747784_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.64	chr18	-	5495	18	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	1	4	intron_retention	FALSE	canonical	3	148	junction_10	124.666392193568	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCTTTGGTGTGTCC	NA	False	NA	-1	True	NA	NA	NA	34757653	34732878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.66	chr18	-	3529	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	-275	1214	-275	1	multi-exon	FALSE	canonical	3	307	junction_21	99.9950565671548	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCCTTTGGTGTG	NA	False	NA	-4	True	NA	NA	NA	34757929	34732881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.67	chr18	-	5444	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-16	0	intron_retention	FALSE	canonical	3	43	junction_7	163.455039689818	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757623	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ES.16314.68	chr18	-	3402	24	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	203.464529451208	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757620	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34745296_34745421_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.69	chr18	-	4761	20	NIC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	-16	0	intron_retention	FALSE	canonical	3	307	junction_19	97.5415246470492	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757623	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.7	chr18	-	4035	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.766313384251	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAGTATGACCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34757642	34731663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.70	chr18	-	3210	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	145.253348145206	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757621	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738732_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.71	chr18	-	6309	20	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_13	148.463655699676	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757635	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744259_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.72	chr18	-	3135	21	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	143.925015198888	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757633	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34757590
ES.16314.73	chr18	-	6373	20	NNC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-17	0	intron_retention	FALSE	canonical	2	11	junction_7	175.588476328575	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757624	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.74	chr18	-	3016	21	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	177.192155582576	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757620	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738980_34739040_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.75	chr18	-	9532	17	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_5	150.925478299722	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757627	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738732_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ES.16314.76	chr18	-	2113	17	NNC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	153.945150540704	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757626	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740425_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.77	chr18	-	3034	21	NNC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	184.011168139328	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757642	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.78	chr18	-	4035	19	NNC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	-16	0	intron_retention	FALSE	canonical	3	7	junction_6	190.31948448028	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757623	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738624_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.8	chr18	-	5717	20	NNC	ENSMUSG00000003778.15	novel	4258	21	NA	NA	-16	1	intron_retention	FALSE	non_canonical	0	0	junction_1	177.036860177467	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACTAGTATGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	34757623	34731666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34732630_34732844_34733295_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.80	chr18	-	3165	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	174.722611386464	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757626	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742939_34743003_34743462_34743682_34744184_34744322_34746089_34746177_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.82	chr18	-	6953	18	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-231	0	intron_retention	FALSE	canonical	3	148	junction_10	124.486015945929	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757885	34732882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.83	chr18	-	6209	20	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	21	-1	intron_retention	FALSE	canonical	3	43	junction_6	181.911366198912	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757633	34732883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.84	chr18	-	5340	19	ISM	ENSMUSG00000003778.15	ENSMUST00000152612.8	4335	20	-20	1	-19	-1	intron_retention	FALSE	canonical	3	50	junction_7	138.490372709923	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757626	34732883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ES.16314.85	chr18	-	3615	24	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_16	219.29843456497	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757620	34732883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744544_34745296_34745421_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749780_34756507_34756605_34757590
ES.16314.86	chr18	-	3381	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-275	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	141.660255891247	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTCTGGCCTTTGGTG	NA	False	NA	-6	True	NA	NA	NA	34757929	34732883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590_34757738_34757883
ES.16314.87	chr18	-	4928	19	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	18	-2	intron_retention	FALSE	canonical	3	50	junction_6	161.882378043404	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757636	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.88	chr18	-	3243	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	145.219858339815	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757630	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747784_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.89	chr18	-	5200	21	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	1	junction_20	143.516854410902	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757626	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756621_34757590
ES.16314.90	chr18	-	6329	19	NIC	ENSMUSG00000003778.15	novel	4335	20	NA	NA	13	-2	intron_retention	FALSE	canonical	3	50	junction_6	144.248339100779	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757641	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.92	chr18	-	3276	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	161.595588731626	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757620	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34738980_34739040_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.93	chr18	-	2725	10	NIC	ENSMUSG00000003778.15	novel	3005	21	NA	NA	15548	-2	intron_retention	FALSE	canonical	2	4	junction_6	191.39358968586	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	9493	False	NA	-7	True	NA	NA	NA	34742058	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34739472_34739520_34739727_34739822_34740091_34740545_34740827
ES.16314.94	chr18	-	4571	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_14	174.329632769871	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757626	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34744805_34744977_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.96	chr18	-	4977	20	NIC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	16	-2	intron_retention	FALSE	canonical	3	148	junction_12	123.932695522169	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	NA	False	NA	-7	True	NA	NA	NA	34757638	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.97	chr18	-	4553	11	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	15436	-2	intron_retention	FALSE	canonical	3	7	junction_5	181.887877550979	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACTCTGGCCTTTGGT	9381	False	NA	-7	True	NA	NA	NA	34742170	34732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738624_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470
ES.16314.98	chr18	-	5360	21	NNC	ENSMUSG00000003778.15	novel	3869	21	NA	NA	-206	-4	intron_retention	FALSE	canonical	0	0	junction_9	146.260546628269	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAACTCTGGCCTTTG	NA	False	NA	-9	True	NA	NA	NA	34757860	34732886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740883_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16314.99	chr18	-	4566	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	-13	-4	intron_retention	FALSE	canonical	1	1	junction_2	173.788570165536	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAACTCTGGCCTTTG	NA	False	NA	-9	True	NA	NA	NA	34757620	34732886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34733295_34733659_34733834_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ES.16315.1	chr18	-	5182	2	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2055	4612	intron_retention	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTTAGAAAATCACCATA	NA	False	NA	NA	False	NA	NA	NA	34765628	34759391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34762908_34763962
ES.16315.10	chr18	-	3816	18	NNC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	423.993095850298	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784774	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34764355_34765574_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34773014_34773198_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.11	chr18	-	2074	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	12	-2	-1	2	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784776	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.13	chr18	-	1991	17	NNC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	359.58121800749	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784768	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784490_34784648
ES.16315.14	chr18	-	2141	16	NIC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	3	2	intron_retention	FALSE	canonical	3	73	junction_1	265.865596788218	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784768	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34764355_34767135_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.15	chr18	-	3317	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.278486912116	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784776	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34765650_34767204_34767235_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.16	chr18	-	2024	17	NNC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	359.58121800749	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784779	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784499_34784635
ES.16315.17	chr18	-	4921	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	3	1	intron_retention	FALSE	canonical	3	906	junction_8	80.3187527344413	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTACTGTTCTTTCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	34784768	34764002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.19	chr18	-	1627	13	NNC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	421.734974704362	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATACTACTGTTCTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34784768	34764004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34764355_34767441_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.2	chr18	-	4871	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	-2	-736	-2	4	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTTCTTTCTAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	34784790	34763999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.20	chr18	-	5007	14	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	11	junction_3	301.656825277809	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATACTACTGTTCTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34784779	34764004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767566_34767640_34767720_34769338_34769401_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.21	chr18	-	5031	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	371.203090470702	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATACTACTGTTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	34784774	34764006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34773014_34773198_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.23	chr18	-	4100	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	5	28	5	-28	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCTTTCATTCCTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	34784783	34764763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.24	chr18	-	4159	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	4	-28	intron_retention	FALSE	canonical	3	906	junction_8	80.3187527344413	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCTTTCATTCCTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	34784767	34764763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.25	chr18	-	4446	14	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	-28	intron_retention	FALSE	canonical	3	906	junction_7	82.0183988595199	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCTTTCATTCCTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	34784774	34764763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.26	chr18	-	3051	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	377.546759429287	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGGTGTATGCTGAAG	NA	False	NA	66	True	AATACA	-16	NA	34784776	34765761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780090_34784442_34784516_34784640
ES.16315.27	chr18	-	3718	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-776	968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	276.117438499907	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGGGTGTATGCTGAA	NA	False	NA	65	True	AATACA	-15	NA	34785564	34765762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599_34784875_34785038
ES.16315.28	chr18	-	3676	5	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	415	901	intron_retention	FALSE	canonical	3	1019	junction_2	52.1967431934216	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTTGTGCATGAAAA	NA	False	NA	-2	True	AATAAA	-26	NA	34770509	34765829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34769401_34769755_34769832_34770111_34770232_34770372
ES.16315.29	chr18	-	3041	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	900	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	284.690209799276	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATATTTGTGCATGAAA	NA	False	NA	-3	True	AATAAA	-25	NA	34784774	34765830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767235_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.3	chr18	-	1992	16	NNC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.21333774051	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTTCTTTCTAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	34784772	34763999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34764355_34767441_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774229_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.32	chr18	-	3117	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-5	899	intron_retention	FALSE	canonical	3	906	junction_8	80.3187527344413	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATTTGTGCATGAA	NA	False	NA	-4	True	AATAAA	-24	NA	34784793	34765831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.33	chr18	-	2950	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	5	896	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	292.041267701701	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATATAATATTTGTGCAT	NA	False	NA	-7	True	AATAAA	-21	NA	34784783	34765834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.34	chr18	-	2885	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-2	895	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	291.017225452728	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATATAATATTTGTGCA	NA	False	NA	-8	True	AATAAA	-20	NA	34784773	34765835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.35	chr18	-	2660	13	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	894	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	313.041619526151	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATATAATATTTGTGC	NA	False	NA	-9	True	AATAAA	-19	NA	34784774	34765836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.38	chr18	-	3011	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	284.818273446225	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATATAATATTTGTGC	NA	False	NA	-9	True	AATAAA	-19	NA	34784774	34765836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767713_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.4	chr18	-	4617	13	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	3	3	intron_retention	FALSE	canonical	0	0	junction_9	414.95973700268	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGTTCTTTCTAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	34784768	34764000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34776851_34776985_34777077_34777184_34777991_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.41	chr18	-	3309	15	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	891	intron_retention	FALSE	canonical	1	3	junction_13	287.760609478342	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCCATATAATATTTG	NA	False	NA	-12	True	AATAAA	-16	NA	34784775	34765839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784224_34784516_34784599
ES.16315.42	chr18	-	3449	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-2	891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	427.580547967281	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCCATATAATATTTG	NA	False	NA	-12	True	AATAAA	-16	NA	34784773	34765839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774740_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780168_34783497_34783822_34784442_34784516_34784599
ES.16315.43	chr18	-	3195	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-763	891	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	275.884826512804	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCCATATAATATTTG	NA	False	NA	-12	True	AATAAA	-16	NA	34785551	34765839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599_34784875_34785471
ES.16315.44	chr18	-	2171	8	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2	889	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	489.653646854132	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784786	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34770111_34770232_34770372_34770527_34784442_34784516_34784599
ES.16315.45	chr18	-	2934	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	combination_of_known_splicesites	FALSE	canonical	1	11	junction_4	290.700429645225	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784771	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.48	chr18	-	2927	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2	889	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	281.562750061549	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784769	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770192_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.49	chr18	-	3060	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	280.998189001677	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784770	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780144_34784442_34784516_34784599
ES.16315.50	chr18	-	4628	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	889	intron_retention	FALSE	canonical	3	906	junction_8	81.5277591388607	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784770	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.51	chr18	-	4989	13	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	889	intron_retention	FALSE	canonical	3	906	junction_6	85.3380125670202	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784776	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34769401_34769755_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.52	chr18	-	5256	14	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	889	intron_retention	FALSE	canonical	3	906	junction_9	82.0746521205546	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784776	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.53	chr18	-	3294	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	intron_retention	FALSE	canonical	3	906	junction_8	80.5580346009975	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784775	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.55	chr18	-	3044	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2	889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	282.672122588855	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784769	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774740_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.56	chr18	-	3039	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	889	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	282.191849634251	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784776	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774728_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.57	chr18	-	3005	16	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	284.818273446225	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784775	34765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767707_34769334_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.58	chr18	-	3082	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	7	888	intron_retention	FALSE	canonical	3	1019	junction_4	62.4170061206177	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTCCATATAATAT	NA	False	NA	-15	True	AATAAA	-13	NA	34784764	34765842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.59	chr18	-	3193	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	371.364960104949	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTATTCCATATAATA	NA	False	NA	-16	True	AATAAA	-12	NA	34784769	34765843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34773010_34773198_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.6	chr18	-	4495	13	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1686	2	intron_retention	FALSE	canonical	1	11	junction_4	308.362205855387	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34780058	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954
ES.16315.60	chr18	-	3325	15	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	887	intron_retention	FALSE	canonical	0	0	junction_9	290.518607363607	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTATTCCATATAATA	NA	False	NA	-16	True	AATAAA	-12	NA	34784772	34765843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774740_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.61	chr18	-	3319	17	NNC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-1	887	intron_retention	FALSE	non_canonical	0	0	junction_13	428.396501502988	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTATTCCATATAATA	NA	False	NA	-16	True	AATAAA	-12	NA	34784776	34765843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780109_34783492_34783596_34783709_34783822_34784442_34784516_34784599
ES.16315.63	chr18	-	2951	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	869	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	288.063449643318	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGCATAAACAATG	NA	False	NA	7	True	NA	NA	NA	34784775	34765861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34779954_34780093_34784442_34784516_34784599
ES.16315.64	chr18	-	5136	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	2	869	intron_retention	FALSE	canonical	3	906	junction_9	79.1129391620432	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGCATAAACAATG	NA	False	NA	7	True	NA	NA	NA	34784769	34765861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.66	chr18	-	2911	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	-12	1234	-12	761	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTAGGCTGGTTCCCACT	NA	False	NA	-101	True	TTTAAA	-22	NA	34784800	34765969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.67	chr18	-	1880	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	20	2233	3	-238	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGGACCTAGACAGAAAC	NA	False	NA	NA	False	AGTAAA	-21	NA	34784768	34766968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.68	chr18	-	2026	12	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	1	239	intron_retention	FALSE	canonical	3	906	junction_5	86.6711272427021	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGACTGGACTAGCAGT	NA	False	NA	NA	False	AATAAA	-33	NA	34784774	34768867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.69	chr18	-	2477	10	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	-2	212	intron_retention	FALSE	canonical	0	0	junction_7	349.184694133755	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-6	NA	34784777	34768894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34779954_34780093_34784442_34784516_34784599
ES.16315.7	chr18	-	4775	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	2	intron_retention	FALSE	canonical	2	3	junction_2	292.041267701701	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACTGTTCTTTCTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	34784775	34764001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34767218_34767445_34767566_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ES.16315.70	chr18	-	1361	1	NIC	ENSMUSG00000024370.18	novel	2084	17	NA	NA	4	-2650	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	842	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	34784767	34783406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34783400_34784800
ES.16316.1	chr18	+	161	1	Intergenic	novelGene_13612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34792407	34792568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34792400_34792600
ES.16317.1	chr18	+	162	1	Intergenic	novelGene_13613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGTGAGTGGAGTA	NA	False	NA	NA	False	NA	NA	NA	34797507	34797669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34797500_34797700
ES.16318.1	chr18	-	176	1	Intergenic	novelGene_13614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34807243	34807067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34807100_34807200
ES.16319.1	chr18	-	2053	8	FSM	ENSMUSG00000024366.9	ENSMUST00000025224.9	1997	8	-61	5	-61	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.903507902905251	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTCTTTCCTAATTT	9289	False	NA	NA	False	ATTAAA	-15	NA	34853501	34822955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34823677_34823868_34823958_34824317_34824453_34824601_34824706_34828616_34828930_34837533_34837627_34844168_34844457_34853191
ES.1632.1	chr1	-	5953	31	NNC	ENSMUSG00000004110.18	novel	14921	47	NA	NA	-413	-27053	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.17950549357115	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAATCTTGAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	154602515	154316774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_154317352_154317877_154318043_154319546_154319749_154320617_154320756_154321245_154321407_154324591_154324689_154341464_154341572_154342691_154342752_154343429_154343560_154343649_154343742_154344691_154344855_154347083_154347398_154347805_154348460_154353511_154353610_154354996_154355065_154357297_154357416_154358296_154358370_154358820_154358953_154359262_154359376_154361408_154361522_154362243_154362454_154363789_154363880_154364530_154364585_154369047_154369164_154437476_154437581_154509299_154509482_154510585_154510739_154511502_154511607_154576116_154576257_154577020_154577127_154601396
ES.16320.1	chr18	-	176	1	Intergenic	novelGene_13615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAATGGCATTCC	1274	False	NA	NA	False	NA	NA	NA	34861516	34861340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34861300_34861500
ES.16321.1	chr18	-	174	1	Intergenic	novelGene_13616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGGCATTCCGGGC	1083	False	NA	NA	False	NA	NA	NA	34861707	34861533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34861500_34861700
ES.16322.1	chr18	-	2349	2	Intergenic	novelGene_13617	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34864985	34862459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34862637_34862813
ES.16322.2	chr18	-	147	1	Intergenic	novelGene_13618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTAAGGCCGG	NA	False	NA	NA	False	NA	NA	NA	34862970	34862823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34862800_34863000
ES.16323.1	chr18	+	2975	1	FSM	ENSMUSG00000078240.3	ENSMUST00000105038.3	1656	1	-1279	-40	-1279	40	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATACAAAGGAAACCTTCAA	3472	False	NA	NA	False	NA	NA	NA	34868132	34871107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34868100_34871100
ES.16324.1	chr18	+	1851	5	NNC	ENSMUSG00000097755.3	novel	2398	3	NA	NA	-790	-23	intron_retention	FALSE	canonical	0	0	junction_1	1.6583123951777	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGTACTGTTGAAAT	NA	False	NA	13	True	AATAAA	-27	NA	34884071	34891715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34884598_34885104_34885189_34887536_34887623_34887728_34888453_34891284
ES.16324.10	chr18	+	4246	4	NIC	ENSMUSG00000034300.18	novel	4475	5	NA	NA	169	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	14.9888847706114	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGTGTACGATAGTGT	4606	False	NA	24	True	AATAAA	-31	NA	34892127	34906811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34892198_34895547_34895778_34901220_34902006_34903650
ES.16324.11	chr18	+	4274	5	FSM	ENSMUSG00000034300.18	ENSMUST00000049281.12	4475	5	201	0	201	0	multi-exon	FALSE	canonical	3	4	junction_1	15.2868407462104	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	4638	False	NA	26	True	AATAAA	-33	NA	34892159	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34892198_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ES.16324.12	chr18	+	4727	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	-449	-22	201	0	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	4638	False	NA	26	True	AATAAA	-33	NA	34892159	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ES.16324.13	chr18	+	4338	6	NNC	ENSMUSG00000034300.18	novel	4475	5	NA	NA	202	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9060836769544	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCCCAAGCAACCTTG	4639	False	NA	11	True	AATAAA	-18	NA	34892160	34906798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34892198_34894346_34894427_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ES.16324.14	chr18	+	4668	4	NIC	ENSMUSG00000034300.18	novel	4200	4	NA	NA	202	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	12.657891697365	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	4639	False	NA	26	True	AATAAA	-33	NA	34892160	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34892651_34895547_34895778_34901220_34902006_34903650
ES.16324.15	chr18	+	4212	6	NNC	ENSMUSG00000034300.18	novel	4475	5	NA	NA	202	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.9955550067232	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	4639	False	NA	26	True	AATAAA	-33	NA	34892160	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34892198_34895547_34895778_34896125_34896184_34901220_34901481_34901541_34902006_34903650
ES.16324.16	chr18	+	4542	6	NNC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	-213	-64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.811900546934	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGTTAAAACATGAG	4874	False	NA	-60	True	ATTAAA	-14	NA	34892395	34906727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34892651_34895547_34895778_34896125_34896184_34896471_34896609_34901220_34902006_34903650
ES.16324.18	chr18	+	4275	5	NNC	ENSMUSG00000034300.18	novel	4256	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9466073300823	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	5088	False	NA	26	True	AATAAA	-33	NA	34892609	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34892655_34895553_34895778_34896125_34896184_34901220_34902006_34903650
ES.16324.19	chr18	+	4868	2	ISM	ENSMUSG00000034300.18	ENSMUST00000235929.2	4200	4	7673	2	7673	-2	3prime_fragment	FALSE	canonical	3	38	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGTGTACGATAGTGT	NA	False	NA	24	True	AATAAA	-31	NA	34900298	34906811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34902006_34903650
ES.16324.2	chr18	+	2553	5	NNC	ENSMUSG00000097755.3	novel	490	3	NA	NA	-123	-29	intron_retention	FALSE	canonical	1	2	junction_1	5.7227615711298	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAAATACAGTACTGT	NA	False	NA	7	True	AATAAA	-21	NA	34884738	34891709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34885189_34887536_34888959_34889051_34889205_34889342_34889446_34891284
ES.16324.20	chr18	+	2696	8	Fusion	ENSMUSG00000034300.18_ENSMUSG00000038773.12	novel	4475	5	NA	NA	-8560	-46	multi-exon	FALSE	canonical	0	0	junction_2	114.131324287741	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAAAATAAACTATAAAAA	NA	False	NA	-19	True	AATAGA	-44	NA	34901539	34937640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_34902006_34903650_34904155_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
ES.16324.21	chr18	+	3057	2	NNC	ENSMUSG00000034300.18	novel	4200	4	NA	NA	11097	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	NA	False	NA	26	True	AATAAA	-33	NA	34903722	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34904334_34904367
ES.16324.22	chr18	+	6529	24	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	-151	351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.2425692969381	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTTTCTCTACCAAC	NA	False	NA	166	True	ATTAAA	-29	NA	34909948	34972064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910043_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.23	chr18	+	6559	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-73	334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6786260088742	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTTTGGAGTAGACAAA	NA	False	NA	149	True	ATTAAA	-12	NA	34910026	34972047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910043_34910253_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.24	chr18	+	6745	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	-42	-340	-42	340	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTAGACAAAATTCTT	NA	False	NA	155	True	ATTAAA	-18	NA	34910057	34972053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.25	chr18	+	6304	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-37	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.4880878429995	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910062	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.26	chr18	+	6858	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-33	335	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	92.3329478782568	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910066	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34925426_34925554_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.27	chr18	+	6131	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-32	336	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	70.7726104979477	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGGAGTAGACAAAAT	NA	False	NA	151	True	ATTAAA	-14	NA	34910067	34972049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.28	chr18	+	7503	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-32	339	intron_retention	FALSE	canonical	3	208	junction_7	45.1085925735546	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910067	34972052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.29	chr18	+	6770	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-30	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.132720353318	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910069	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34922721_34922767_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964479_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.3	chr18	+	2102	6	NNC	ENSMUSG00000097755.3	novel	490	3	NA	NA	-62	-25	intron_retention	FALSE	canonical	0	0	junction_2	6.06630035524124	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATACAGTACTGTTGAA	NA	False	NA	11	True	AATAAA	-25	NA	34884799	34891713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34885189_34887536_34888453_34888848_34888959_34889051_34889207_34889342_34889446_34891284
ES.16324.30	chr18	+	6273	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-30	252	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	106.370030240352	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTAATTTCACTTTCT	NA	False	NA	67	True	AATAAA	-18	NA	34910069	34971965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34925426_34925554_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936604_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.31	chr18	+	11691	22	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-29	339	intron_retention	FALSE	canonical	3	241	junction_6	41.5447195058633	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910070	34972052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.33	chr18	+	6596	23	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-22	337	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	73.9938013932796	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTGGAGTAGACAAAATT	NA	False	NA	152	True	ATTAAA	-15	NA	34910077	34972050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34962255_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.34	chr18	+	1755	6	ISM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	-41	4408	-22	23	5prime_fragment	FALSE	canonical	3	267	junction_5	6.22896460095897	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTTTAAAAATCTGCT	NA	False	NA	NA	False	NA	NA	NA	34910077	34933278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337
ES.16324.36	chr18	+	2076	7	FSM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	-39	-5	-20	5	multi-exon	FALSE	canonical	3	241	junction_6	14.229273425661	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTATTTTTCTTTTAA	NA	False	NA	32	True	AATAAA	-41	NA	34910079	34937691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
ES.16324.37	chr18	+	5461	23	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-20	335	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	92.9862804240897	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910079	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34941886_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.38	chr18	+	6672	24	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-19	330	combination_of_known_junctions	FALSE	canonical	1	3	junction_19	72.5153265854334	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTCTTTGGAGTAGA	NA	False	NA	145	True	ATTAAA	-8	NA	34910080	34972043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962312_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.39	chr18	+	6871	22	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-19	320	intron_retention	FALSE	canonical	0	0	junction_13	95.3063326970154	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAACAAATCTCT	NA	False	NA	135	True	NA	NA	NA	34910080	34972033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958016_34960395_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.4	chr18	+	4786	7	Fusion	ENSMUSG00000034300.18_ENSMUSG00000097755.3	novel	2398	3	NA	NA	-32	0	multi-exon	FALSE	canonical	0	0	junction_2	18.8892973812039	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	NA	False	NA	26	True	AATAAA	-33	NA	34884829	34906813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_34885189_34887536_34887623_34887728_34887834_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ES.16324.40	chr18	+	5235	4	NIC	ENSMUSG00000038773.12	novel	2032	7	NA	NA	-19	23	intron_retention	FALSE	canonical	3	273	junction_3	5.55777733351102	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTTTAAAAATCTGCT	NA	False	NA	NA	False	NA	NA	NA	34910080	34933278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34928834_34929840
ES.16324.41	chr18	+	6504	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-19	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.6786260088742	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910080	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936884_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.42	chr18	+	10907	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-18	335	intron_retention	FALSE	canonical	3	241	junction_6	41.4140801305287	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910081	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.43	chr18	+	5035	23	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-15	337	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	74.0745799072107	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTGGAGTAGACAAAATT	NA	False	NA	152	True	ATTAAA	-15	NA	34910084	34972050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.44	chr18	+	6238	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-14	334	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	106.696006519379	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTTTGGAGTAGACAAA	NA	False	NA	149	True	ATTAAA	-12	NA	34910085	34972047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34925426_34925554_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.47	chr18	+	6504	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	0	330	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	73.3180140956251	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTCTTTGGAGTAGA	NA	False	NA	145	True	ATTAAA	-8	NA	34910099	34972043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936914_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.48	chr18	+	6589	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	0	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.2248551210125	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAATTTCACTTTCTG	NA	False	NA	68	True	AATAAA	-19	NA	34910099	34971966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928801_34929834_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.5	chr18	+	1580	4	NNC	ENSMUSG00000097755.3	novel	2398	3	NA	NA	-30	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAAATACAGTACTGT	NA	False	NA	7	True	AATAAA	-21	NA	34884831	34891709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34885189_34887536_34887623_34887728_34888441_34891284
ES.16324.51	chr18	+	6132	23	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	9	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	93.2366136005726	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910108	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34962255_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.52	chr18	+	6584	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-8	250	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	72.3895939215613	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTAATTTCACTTT	NA	False	NA	65	True	AATAAA	-16	NA	34910110	34971963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966523_34967269_34967405_34970642
ES.16324.55	chr18	+	4998	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-5	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	91.1317623534234	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTACTCTCCATGAACAC	NA	False	NA	NA	False	NA	NA	NA	34910113	34971216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34941928_34942181_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.56	chr18	+	6674	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-4	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	74.8429736143139	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTTTGGAGTAGACA	NA	False	NA	147	True	ATTAAA	-10	NA	34910114	34972045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952839_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.58	chr18	+	3212	6	ISM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	-4	2914	-4	1517	5prime_fragment	FALSE	canonical	3	267	junction_5	6.22896460095897	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAAATTAGCAAGAAG	NA	False	NA	NA	False	ATTAAA	-40	NA	34910114	34934772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337
ES.16324.6	chr18	+	2554	4	NIC	ENSMUSG00000097755.3	novel	490	3	NA	NA	-29	-27	intron_retention	FALSE	canonical	1	2	junction_1	5.8878405775519	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAATACAGTACTGTTG	NA	False	NA	9	True	AATAAA	-23	NA	34884832	34891711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34885189_34887536_34889205_34889342_34889446_34891284
ES.16324.60	chr18	+	6577	25	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	1	332	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	72.8771797844382	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTTTGGAGTAGACA	NA	False	NA	147	True	ATTAAA	-10	NA	34910119	34972045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936769_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.63	chr18	+	7045	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	5	247	intron_retention	FALSE	canonical	0	0	junction_8	93.3854746783855	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATACTTTTAATTTCAC	NA	False	NA	62	True	AATAAA	-13	NA	34910123	34971960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936769_34936891_34941293_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.64	chr18	+	6507	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	11	249	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	74.5591589398525	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTTTAATTTCACTT	NA	False	NA	64	True	AATAAA	-15	NA	34910129	34971962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.65	chr18	+	1839	8	NNC	ENSMUSG00000038773.12	novel	2032	7	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	93.7195120493887	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTAAGTCGTATTTT	NA	False	NA	24	True	AATAAA	-33	NA	34910210	34937683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936769
ES.16324.66	chr18	+	6778	25	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	412	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.4571973041219	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTTTGGAGTAGACA	NA	False	NA	147	True	ATTAAA	-10	NA	34910569	34972045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34911030_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936769_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.67	chr18	+	6879	24	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	460	250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.7265394203143	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTAATTTCACTTT	NA	False	NA	65	True	AATAAA	-16	NA	34910617	34971963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34911180_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967286_34967405_34970642
ES.16324.68	chr18	+	6728	24	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	527	339	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.0781823125552	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910684	34972052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910990_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.69	chr18	+	6619	25	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	532	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	106.133563651341	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910689	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910990_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34936672_34936769_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961993_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.7	chr18	+	1696	5	NNC	ENSMUSG00000097755.3	novel	490	3	NA	NA	-1467	-29	intron_retention	FALSE	canonical	0	0	junction_1	6.16441400296898	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAAATACAGTACTGT	65	False	NA	7	True	AATAAA	-21	NA	34887586	34891709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34888453_34888809_34888959_34889051_34889205_34889342_34889446_34891284
ES.16324.70	chr18	+	6755	24	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	536	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.2425692969381	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910693	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34911030_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.71	chr18	+	6997	26	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	537	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.670005968011	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910694	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34911030_34912085_34912202_34925426_34925554_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946463_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964619_34966363_34966541_34967269_34967405_34970642
ES.16324.72	chr18	+	6093	23	NNC	ENSMUSG00000038773.12	novel	42	3	NA	NA	558	335	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	93.0433116953587	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	NA	False	NA	150	True	ATTAAA	-13	NA	34910715	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34910990_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.74	chr18	+	181	1	Intergenic	novelGene_13620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	34931494	34931675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34931500_34931700
ES.16324.75	chr18	+	294	1	Intergenic	novelGene_13621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTGTAGCTCATTTA	NA	False	NA	NA	False	NA	NA	NA	34931495	34931789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34931500_34931800
ES.16324.76	chr18	+	5323	18	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	6979	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.2011103823422	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTTTGGAGTAGACA	4626	False	NA	147	True	ATTAAA	-10	NA	34936926	34972045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34937022_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.77	chr18	+	4143	17	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	6994	335	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86.2159353020078	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	4641	False	NA	150	True	ATTAAA	-13	NA	34936941	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34937103_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.78	chr18	+	5996	17	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	6995	252	intron_retention	FALSE	canonical	0	0	junction_1	86.4296814974462	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTAATTTCACTTTCT	4642	False	NA	67	True	AATAAA	-18	NA	34936942	34971965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34937022_34941293_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.8	chr18	+	3031	1	NIC	ENSMUSG00000097755.3	novel	678	2	NA	NA	-369	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGTACTGTTGAAAT	1163	False	NA	13	True	AATAAA	-27	NA	34888684	34891715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34888700_34891700
ES.16324.81	chr18	+	9088	15	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-7597	320	intron_retention	FALSE	canonical	3	247	junction_2	42.2524000042891	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAACAAATCTCT	6712	False	NA	135	True	NA	NA	NA	34939012	34972033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34943514_34945424_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.82	chr18	+	5124	17	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-5215	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	86.342975249872	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	9094	False	NA	150	True	ATTAAA	-13	NA	34941394	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957760_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.83	chr18	+	5450	16	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-5061	40	intron_retention	FALSE	canonical	3	247	junction_3	41.8422434070322	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGTTTTGTCTAGAA	9248	False	NA	NA	False	TATAAA	-18	NA	34941548	34971753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.84	chr18	+	5278	17	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-4940	250	intron_retention	FALSE	canonical	0	0	junction_7	110.445104435416	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTAATTTCACTTT	9369	False	NA	65	True	AATAAA	-16	NA	34941669	34971963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957394_34957550_34957754_34958012_34960391_34960659_34961466_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.86	chr18	+	5323	16	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-4586	335	intron_retention	FALSE	canonical	3	247	junction_3	43.0522163579685	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	9723	False	NA	150	True	ATTAAA	-13	NA	34942023	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34942543_34943311_34943514_34945424_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.89	chr18	+	174	1	Intergenic	novelGene_13622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34954155	34954329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_34954200_34954300
ES.16324.9	chr18	+	2171	2	NNC	ENSMUSG00000097755.3	novel	2398	3	NA	NA	319	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTGAAATCGGTTCCT	1851	False	NA	21	True	AATAAA	-35	NA	34889372	34891723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34891075_34891254
ES.16324.90	chr18	+	3317	11	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	-2298	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	133.429419544567	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAACAAATCTCT	1918	False	NA	135	True	NA	NA	NA	34956590	34972033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964479_34964617_34966363_34966541_34967269_34967405_34970377
ES.16324.91	chr18	+	2372	8	ISM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	51364	-332	2575	332	3prime_fragment	FALSE	canonical	3	320	junction_4	21.3063179285739	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTTTGGAGTAGACA	6791	False	NA	147	True	ATTAAA	-10	NA	34961463	34972045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.92	chr18	+	3569	6	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	2909	335	intron_retention	FALSE	canonical	3	334	junction_3	16.7976188788769	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTGGAGTAGACAAAA	7125	False	NA	150	True	ATTAAA	-13	NA	34961797	34972048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_34962083_34962220_34962352_34963181_34964617_34966363_34966541_34967269_34967405_34970642
ES.16324.93	chr18	+	1927	3	ISM	ENSMUSG00000038773.12	ENSMUST00000223567.2	2997	5	5238	2782	5238	-2782	internal_fragment	FALSE	canonical	3	334	junction_1	23.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGGAGGGAAGGAAAGG	9454	False	NA	NA	False	NA	NA	NA	34964126	34968529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_34964617_34966363_34966541_34967269
ES.16325.1	chr18	-	2179	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	27	-261	2	261	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCCAGGCTCTTCCTGG	2819	False	NA	NA	False	AGTAAA	-14	NA	34884559	34865784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.11	chr18	-	2594	13	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-13	-40	intron_retention	FALSE	canonical	3	11	junction_6	52.6552598406739	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2779	False	NA	-59	True	NA	NA	NA	34884599	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
ES.16325.12	chr18	-	5684	12	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-40	intron_retention	TRUE	non_canonical	0	0	junction_1	69.665790127218	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34870414_34871112_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.13	chr18	-	4127	10	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-37	-40	intron_retention	FALSE	canonical	3	11	junction_4	52.3747182437396	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2755	False	NA	-59	True	NA	NA	NA	34884623	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
ES.16325.14	chr18	-	3626	12	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	-40	intron_retention	FALSE	canonical	3	155	junction_11	19.0015223400566	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2798	False	NA	-59	True	NA	NA	NA	34884580	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.15	chr18	-	1804	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	50.4637663673287	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.16	chr18	-	4221	5	NNC	ENSMUSG00000044201.11	novel	2121	14	NA	NA	-2	-40	intron_retention	FALSE	non_canonical	0	0	junction_3	85.5219270129012	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34870262_34882191_34882665_34883790
ES.16325.17	chr18	-	2026	14	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-15	-40	intron_retention	FALSE	canonical	3	7	junction_13	67.0481589702639	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2777	False	NA	-59	True	NA	NA	NA	34884601	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884013_34884166
ES.16325.19	chr18	-	1718	7	NNC	ENSMUSG00000044201.11	novel	2121	14	NA	NA	-882	-40	intron_retention	FALSE	non_canonical	0	0	junction_2	72.6737381880293	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	9380	False	NA	-59	True	NA	NA	NA	34877998	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867639_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923
ES.16325.2	chr18	-	3510	13	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	12	intron_retention	FALSE	canonical	3	11	junction_5	52.5396014661533	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGCCTGTCGTGCTGAT	2799	False	NA	-3	True	AATAAA	-34	NA	34884579	34866033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.20	chr18	-	1669	13	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-40	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	54.9051581264355	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.21	chr18	-	1668	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-40	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	52.4486787757847	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34884166_34884265_34884366
ES.16325.22	chr18	-	1890	15	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	2	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.3468100076254	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2794	False	NA	-59	True	NA	NA	NA	34884584	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880684_34881963_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.23	chr18	-	2037	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	5	-40	intron_retention	FALSE	canonical	3	155	junction_13	20.7081723569914	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2806	False	NA	-59	True	NA	NA	NA	34884572	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
ES.16325.24	chr18	-	1894	15	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-13	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.2990929625029	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2779	False	NA	-59	True	NA	NA	NA	34884599	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884245_34884366
ES.16325.25	chr18	-	3780	11	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	5	-40	intron_retention	FALSE	canonical	3	11	junction_4	54.6268249123084	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2806	False	NA	-59	True	NA	NA	NA	34884572	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884265_34884366
ES.16325.26	chr18	-	1907	15	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-40	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	50.9295231327627	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2799	False	NA	-59	True	NA	NA	NA	34884579	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868410_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.27	chr18	-	1700	14	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-13	-40	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_12	67.5193594854501	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2779	False	NA	-59	True	NA	NA	NA	34884599	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34884166_34884265_34884366
ES.16325.28	chr18	-	1909	16	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.8868106142522	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACATGGGCAGAGCCAG	2799	False	NA	NA	False	NA	NA	NA	34884579	34866209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34870079_34870211_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880670_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.3	chr18	-	3486	13	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	155	junction_12	21.9108040321056	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2799	False	NA	-15	True	AATAAA	-22	NA	34884579	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.4	chr18	-	4011	11	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-39	0	intron_retention	FALSE	canonical	3	155	junction_10	9.8812954616285	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2753	False	NA	-15	True	AATAAA	-22	NA	34884625	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.5	chr18	-	3876	10	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-3	0	intron_retention	FALSE	canonical	1	8	junction_2	68.0751219038367	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2798	False	NA	-15	True	AATAAA	-22	NA	34884580	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34868523_34871268_34871332_34876990_34877129_34877923_34878023_34880276_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.6	chr18	-	3595	12	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	161	junction_6	21.0516876691397	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2792	False	NA	-15	True	AATAAA	-22	NA	34884586	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166
ES.16325.7	chr18	-	2975	14	NIC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	155	junction_13	21.055013879536	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2792	False	NA	-15	True	AATAAA	-22	NA	34884586	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_34866447_34866629_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.8	chr18	-	3734	12	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	-46	0	intron_retention	FALSE	canonical	3	11	junction_4	52.1141468079509	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2746	False	NA	-15	True	AATAAA	-22	NA	34884632	34866045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16325.9	chr18	-	1978	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	-77	44	-77	-40	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAAAT	2715	False	NA	-59	True	NA	NA	NA	34884663	34866089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ES.16326.1	chr18	-	174	1	Intergenic	novelGene_13619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	9323	False	NA	NA	False	NA	NA	NA	34898820	34898646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34898600_34898800
ES.16327.1	chr18	-	5269	17	Antisense	novelGene_ENSMUSG00000038773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATTTCATAAAGTAGAT	NA	False	NA	NA	False	AAAACA	-9	NA	34971216	34940426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_34942541_34943309_34943517_34945426_34945639_34946458_34946614_34952832_34952940_34955422_34955550_34956481_34956763_34957752_34958012_34960391_34960657_34961464_34961639_34961991_34962081_34962218_34962351_34963180_34963300_34964474_34964615_34966361_34966537_34967265_34967399_34970636
ES.16327.2	chr18	-	174	1	Intergenic	novelGene_13623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	34957155	34956981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_34957000_34957200
ES.16327.3	chr18	-	4167	9	Antisense	novelGene_ENSMUSG00000038773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGCTGGTTCATTTTA	NA	False	NA	NA	False	NA	NA	NA	34971216	34958867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_34959655_34959993_34960657_34961464_34961639_34961991_34962081_34962218_34962351_34963180_34964615_34966361_34966537_34967265_34967399_34970636
ES.16327.4	chr18	-	5350	7	Antisense	novelGene_ENSMUSG00000038773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGCTGGTTCATTTTA	NA	False	NA	NA	False	NA	NA	NA	34971216	34958867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_34959655_34959993_34960657_34961464_34962081_34962218_34964615_34966361_34966537_34967265_34967399_34970636
ES.16328.1	chr18	+	1849	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	68	9	68	-9	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTTATTGTGATCTC	NA	False	NA	7	True	AATAAA	-13	NA	34973709	34980507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
ES.16329.1	chr18	+	3343	2	FSM	ENSMUSG00000038418.8	ENSMUST00000064795.6	4484	2	1115	26	-269	2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAGGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	34993990	34998011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_34994840_34995517
ES.1633.1	chr1	+	506	2	Antisense	novelGene_ENSMUSG00000004110.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACAAACCTATATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	154718980	154720620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_154719167_154720300
ES.16330.1	chr18	-	202	1	Intergenic	novelGene_13624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTTTACCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	35014463	35014261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35014300_35014500
ES.16331.1	chr18	-	3710	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	2	-3	2	3	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCTTGAGATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	35065058	35035834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.10	chr18	-	3506	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	123	-1342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	336.88023094269	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	-10	True	AATAAA	-31	NA	35064937	35037179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039845_35040067_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.12	chr18	-	2462	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	32	-1342	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	337.159665440574	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	-10	True	AATAAA	-31	NA	35065028	35037179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064494_35064726_35064886
ES.16331.13	chr18	-	3818	10	NIC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	34	-1342	intron_retention	FALSE	canonical	3	901	junction_9	92.0436021207233	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	-10	True	AATAAA	-31	NA	35065026	35037179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35038124_35039034_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.15	chr18	-	2022	9	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	34	-1342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	485.347282237163	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	-10	True	AATAAA	-31	NA	35065026	35037179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064945
ES.16331.23	chr18	-	2026	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	-5	1688	-5	-1688	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTGGTCTCTGTTTAA	NA	False	NA	-1	True	AATATA	-22	NA	35065065	35037525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.29	chr18	-	1933	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	39	-1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	339.479837398335	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTCTCTCTTGGTCT	NA	False	NA	-9	True	AATATA	-14	NA	35065021	35037533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047188_35064621_35064726_35064886
ES.16331.30	chr18	-	2106	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	34	-1696	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	337.159665440574	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTCTCTCTTGGTCT	NA	False	NA	-9	True	AATATA	-14	NA	35065026	35037533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064494_35064726_35064886
ES.16331.31	chr18	-	1930	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	-41	-1697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	339.464003982749	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTCTCTCTTGGTC	NA	False	NA	-10	True	AATATA	-13	NA	35065101	35037534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041217_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.32	chr18	-	2008	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	34	-1697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	338.584775204084	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTCTCTCTTGGTC	NA	False	NA	-10	True	AATATA	-13	NA	35065026	35037534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064756_35064886
ES.16331.33	chr18	-	1953	11	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	55	-1697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	328.264969194095	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTCTCTCTTGGTC	NA	False	NA	-10	True	AATATA	-13	NA	35065005	35037534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042983_35043166_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.37	chr18	-	1874	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	14	1821	14	-1821	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCATACTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	35065046	35037658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.38	chr18	-	1775	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	-1	1935	-1	-1935	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGATGGTAAAATTGGTT	NA	False	NA	NA	False	AAAAAG	-20	NA	35065061	35037772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.39	chr18	-	182	1	Intergenic	novelGene_13625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGCTATTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	35040391	35040209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35040200_35040400
ES.16331.40	chr18	-	2427	4	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	8	8928	8	-8928	5prime_fragment	FALSE	canonical	3	901	junction_3	71.5029136935458	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAATAATTGCTTAAG	NA	False	NA	NA	False	NA	NA	NA	35065052	35044765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.41	chr18	-	6751	1	NIC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	14	-22458	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACTGTAGTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	35065046	35058295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35058300_35065000
ES.16331.42	chr18	-	6596	2	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	8	22458	8	-22458	5prime_fragment	FALSE	canonical	3	901	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACTGTAGTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	35065052	35058295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35064726_35064886
ES.16331.43	chr18	-	4486	3	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	39	-22458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	450.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACTGTAGTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	35065021	35058295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35058377_35060455_35064726_35064886
ES.16331.5	chr18	-	3583	12	NNC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.042441868702	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATATATTTTGTGTGCT	NA	False	NA	NA	False	ATTAAA	-9	NA	35065005	35035844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35036903_35036966_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.6	chr18	-	3521	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	14	174	14	-174	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGTATCAATATATAC	NA	False	NA	NA	False	NA	NA	NA	35065046	35036011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.7	chr18	-	3243	10	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	339	288	339	-288	3prime_fragment	FALSE	canonical	3	1038	junction_9	65.5033690585812	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCCTTTTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	35064721	35036125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621
ES.16331.8	chr18	-	2471	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	34	1204	34	-1204	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAGACACGACACGT	NA	False	NA	NA	False	AATGAA	-21	NA	35065026	35037041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16331.9	chr18	-	2386	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	-9	1332	-9	-1332	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGGATCTATTCT	NA	False	NA	0	True	AATAAA	-41	NA	35065069	35037169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ES.16332.1	chr18	+	3280	1	Intergenic	novelGene_13626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAGGTGTTCACTATA	NA	False	NA	NA	False	AATAAA	-17	NA	35065225	35068505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35065200_35068500
ES.16332.2	chr18	+	1138	1	Intergenic	novelGene_13627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGTGGACCACTTACT	NA	False	NA	NA	False	CATAAA	-12	NA	35065725	35066863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35065700_35066900
ES.16333.1	chr18	-	379	1	Intergenic	novelGene_13628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAGACTAGC	NA	False	NA	NA	False	NA	NA	NA	35068101	35067722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35067700_35068100
ES.16333.2	chr18	-	261	1	Intergenic	novelGene_13629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGCAACCACATGG	NA	False	NA	NA	False	NA	NA	NA	35068100	35067839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35067800_35068100
ES.16334.1	chr18	+	2171	1	Intergenic	novelGene_13630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	35087713	35089884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35087700_35089900
ES.16334.2	chr18	+	5019	1	Intergenic	novelGene_13631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGGTATAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	35087722	35092741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35087700_35092700
ES.16334.3	chr18	+	350	1	Intergenic	novelGene_13632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACATTGCATTTCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	35088634	35088984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35088600_35089000
ES.16335.1	chr18	-	3385	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	-336	0	-336	0	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	NA	False	NA	-19	True	CATAAA	-5	NA	35087746	35070466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.100	chr18	-	2507	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	213	149	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_16	1535.60645593199	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTGTCACTAGCCT	412	False	NA	-8	True	AATAAA	-20	NA	35087197	35071170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086847
ES.16335.101	chr18	-	3675	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	148	intron_retention	FALSE	canonical	2	3	junction_3	1648.50572411775	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTCTGTCACTAGCC	207	False	NA	-9	True	AATAAA	-19	NA	35087402	35071171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729
ES.16335.102	chr18	-	4746	16	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	7	148	intron_retention	TRUE	canonical	0	0	junction_12	1615.74905092207	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTCTGTCACTAGCC	206	False	NA	-9	True	AATAAA	-19	NA	35087403	35071171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35083521_35084030_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.109	chr18	-	2789	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	148	intron_retention	FALSE	canonical	3	5978	junction_5	273.551425187701	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTCTGTCACTAGCC	213	False	NA	-9	True	AATAAA	-19	NA	35087396	35071171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.11	chr18	-	4451	16	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	25	7	25	-7	intron_retention	FALSE	canonical	3	5978	junction_5	266.596023976353	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCCAGTCGTTGTA	224	False	NA	-26	True	NA	NA	NA	35087385	35070473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729
ES.16335.110	chr18	-	1519	11	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	18	148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1956.45179853734	3734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTCTGTCACTAGCC	217	False	NA	-9	True	AATAAA	-19	NA	35087392	35071171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35085511_35085537_35085729_35085789_35087222
ES.16335.111	chr18	-	3758	7	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	9561	706	3328	147	intron_retention	FALSE	canonical	3	5978	junction_5	310.776670438579	3733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTTCTGTCACTAGC	9760	False	NA	-10	True	AATAAA	-18	NA	35077849	35071172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917
ES.16335.112	chr18	-	3769	16	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	7	707	7	146	intron_retention	FALSE	canonical	3	5978	junction_5	266.596023976353	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTGTTCTGTCACTAG	206	False	NA	-11	True	AATAAA	-17	NA	35087403	35071173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729
ES.16335.113	chr18	-	2308	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1566.55981448004	3734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTGTTCTGTCACTAG	213	False	NA	-11	True	AATAAA	-17	NA	35087396	35071173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079692_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.117	chr18	-	3576	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	17	145	intron_retention	FALSE	canonical	3	5978	junction_5	273.122162329525	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTGTTCTGTCACTA	216	False	NA	-12	True	AATAAA	-16	NA	35087393	35071174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.118	chr18	-	989	9	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	15	8605	15	1514	5prime_fragment	FALSE	canonical	3	6028	junction_4	230.092916014379	3552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAACATGGCGCTTCA	214	False	NA	NA	False	NA	NA	NA	35087395	35079071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.14	chr18	-	3201	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	214	-9	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_16	1535.60645593199	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAAATCCAGTCGTTG	413	False	NA	-28	True	NA	NA	NA	35087196	35070475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086847
ES.16335.15	chr18	-	3208	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	-367	208	-367	-208	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGATAGCTCAAGGAT	NA	False	NA	0	True	AATAAA	-30	NA	35087777	35070674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.16	chr18	-	7451	13	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	18	-219	intron_retention	FALSE	canonical	1	54	junction_5	1772.93387379037	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	217	False	NA	-11	True	AATAAA	-19	NA	35087392	35070685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35076339_35077702_35079090_35079548_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.17	chr18	-	5463	8	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-1710	-219	intron_retention	FALSE	canonical	3	5978	junction_1	176.117423722855	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	4722	False	NA	-11	True	AATAAA	-19	NA	35082887	35070685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069
ES.16335.18	chr18	-	4338	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	0	-219	intron_retention	FALSE	canonical	3	6028	junction_10	261.247673556676	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	199	False	NA	-11	True	AATAAA	-19	NA	35087410	35070685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.2	chr18	-	3036	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	1567.35186575757	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	206	False	NA	-19	True	CATAAA	-5	NA	35087403	35070466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085791_35087230
ES.16335.20	chr18	-	8650	13	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-219	intron_retention	FALSE	non_canonical	0	0	junction_10	1790.92769838241	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	204	False	NA	-11	True	AATAAA	-19	NA	35087405	35070685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35081071_35081158_35083762_35084080_35085537_35085729_35085789_35087222
ES.16335.24	chr18	-	3197	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	214	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	1567.35186575757	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	413	False	NA	-12	True	AATAAA	-18	NA	35087196	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086640
ES.16335.28	chr18	-	2800	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-220	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	1567.35186575757	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	214	False	NA	-12	True	AATAAA	-18	NA	35087395	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087236
ES.16335.29	chr18	-	6119	14	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	13	-220	intron_retention	FALSE	canonical	3	5	junction_10	1721.42774442901	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	212	False	NA	-12	True	AATAAA	-18	NA	35087397	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35079712_35080963_35081071_35081158_35081233_35082069_35082191_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.3	chr18	-	5117	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	0	intron_retention	FALSE	canonical	3	5978	junction_5	276.248165403662	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	213	False	NA	-19	True	CATAAA	-5	NA	35087396	35070466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.30	chr18	-	3807	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-220	intron_retention	FALSE	canonical	3	5978	junction_5	271.883667933344	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	204	False	NA	-12	True	AATAAA	-18	NA	35087405	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.34	chr18	-	5504	7	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	330	-220	intron_retention	FALSE	canonical	3	5978	junction_5	298.776207590602	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	6762	False	NA	-12	True	AATAAA	-18	NA	35080847	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35076339_35078996
ES.16335.36	chr18	-	1923	9	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-220	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	2151.54906041554	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	214	False	NA	-12	True	AATAAA	-18	NA	35087395	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35087222
ES.16335.39	chr18	-	4061	11	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-1306	-220	intron_retention	FALSE	canonical	3	5978	junction_4	289.132218889559	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	5126	False	NA	-12	True	AATAAA	-18	NA	35082483	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35081071_35081158_35081233_35082069
ES.16335.42	chr18	-	2756	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-220	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_14	1558.0326424192	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	214	False	NA	-12	True	AATAAA	-18	NA	35087395	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084401_35085448_35085537_35085729_35085789_35087222
ES.16335.43	chr18	-	4967	6	ISM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	9758	220	3525	-220	intron_retention	FALSE	canonical	3	5978	junction_5	283.361535851287	3770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTTGTGAATGGTGA	9957	False	NA	-12	True	AATAAA	-18	NA	35077652	35070686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892
ES.16335.44	chr18	-	2849	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1560.87000980223	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	213	False	NA	-14	True	AATAAA	-16	NA	35087396	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071814_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.45	chr18	-	4856	12	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	869	-222	intron_retention	FALSE	canonical	3	5978	junction_5	278.861676662003	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	3852	False	NA	-14	True	AATAAA	-16	NA	35083757	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069
ES.16335.47	chr18	-	3386	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	7	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	2125.99536155274	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	206	False	NA	-14	True	AATAAA	-16	NA	35087403	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073352_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086640
ES.16335.5	chr18	-	4186	16	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-233	0	intron_retention	FALSE	canonical	2	54	junction_5	1605.58826879399	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	NA	False	NA	-19	True	CATAAA	-5	NA	35087643	35070466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073352_35073892_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.50	chr18	-	2806	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	6	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1560.87000980223	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	205	False	NA	-14	True	AATAAA	-16	NA	35087404	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071763_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.51	chr18	-	3786	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-222	intron_retention	FALSE	canonical	3	5978	junction_3	272.86697813239	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	207	False	NA	-14	True	AATAAA	-16	NA	35087402	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35072079_35072395_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.52	chr18	-	6391	15	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-222	intron_retention	FALSE	non_canonical	0	0	junction_11	1664.5910143029	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCTTTGTGAATGGT	207	False	NA	-14	True	AATAAA	-16	NA	35087402	35070688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35083758_35084087_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.53	chr18	-	2720	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	47	-223	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	1604.51009345532	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTCCTTTGTGAATGG	246	False	NA	-15	True	AATAAA	-15	NA	35087363	35070689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35087222
ES.16335.55	chr18	-	2811	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	7	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1567.50556219109	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTCCTTTGTGAATGG	206	False	NA	-15	True	AATAAA	-15	NA	35087403	35070689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074925_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.56	chr18	-	3011	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-223	intron_retention	FALSE	canonical	3	5978	junction_4	268.447685778812	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTCCTTTGTGAATGG	204	False	NA	-15	True	AATAAA	-15	NA	35087405	35070689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.57	chr18	-	4257	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	11	-223	intron_retention	FALSE	canonical	3	5978	junction_5	279.037485595299	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTCCTTTGTGAATGG	210	False	NA	-15	True	AATAAA	-15	NA	35087399	35070689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.58	chr18	-	5736	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-224	intron_retention	FALSE	canonical	3	5978	junction_5	270.018706834946	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTCCTTTGTGAATG	207	False	NA	-16	True	AATAAA	-14	NA	35087402	35070690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.59	chr18	-	5494	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	17	-224	intron_retention	FALSE	canonical	3	5978	junction_5	271.74199948796	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTCCTTTGTGAATG	216	False	NA	-16	True	AATAAA	-14	NA	35087393	35070690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729
ES.16335.6	chr18	-	3794	16	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	0	intron_retention	TRUE	non_canonical	0	0	junction_3	1594.23259978656	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	214	False	NA	-19	True	CATAAA	-5	NA	35087395	35070466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072080_35072395_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.61	chr18	-	3983	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	25	-224	intron_retention	FALSE	canonical	3	5978	junction_5	261.936392029416	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTCCTTTGTGAATG	224	False	NA	-16	True	AATAAA	-14	NA	35087385	35070690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35085789_35087222
ES.16335.62	chr18	-	4894	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	13	-224	intron_retention	FALSE	canonical	3	5978	junction_5	276.248165403662	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTCCTTTGTGAATG	212	False	NA	-16	True	AATAAA	-14	NA	35087397	35070690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.64	chr18	-	3140	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	2	-224	intron_retention	FALSE	canonical	3	5978	junction_4	248.375378990932	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCTCCTTTGTGAATG	201	False	NA	-16	True	AATAAA	-14	NA	35087408	35070690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.66	chr18	-	2808	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	1567.35186575757	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	207	False	NA	-17	True	AATAAA	-13	NA	35087402	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087230
ES.16335.67	chr18	-	2807	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	10	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1559.72448989397	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	209	False	NA	-17	True	AATAAA	-13	NA	35087400	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072480_35073245_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.68	chr18	-	4318	6	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	3566	-225	intron_retention	FALSE	canonical	3	5978	junction_4	283.470210075062	3770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	9998	False	NA	-17	True	AATAAA	-13	NA	35077611	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072491_35073249_35073368_35073892_35073998_35074917
ES.16335.69	chr18	-	2932	18	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	1	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	2051.73907498832	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	200	False	NA	-17	True	AATAAA	-13	NA	35087409	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086847_35086957_35087222
ES.16335.71	chr18	-	2760	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-225	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	1566.45507436377	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	204	False	NA	-17	True	AATAAA	-13	NA	35087405	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079070_35079587_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.72	chr18	-	4185	16	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-225	intron_retention	FALSE	canonical	1	29	junction_14	1608.79316535373	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	214	False	NA	-17	True	AATAAA	-13	NA	35087395	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084401_35085448_35085537_35085729
ES.16335.74	chr18	-	4319	8	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	124	-225	intron_retention	FALSE	canonical	0	0	junction_7	2233.5830553857	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	6556	False	NA	-17	True	AATAAA	-13	NA	35081053	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072491_35073249_35073368_35073892_35076339_35078996_35079090_35079548_35079712_35080955
ES.16335.75	chr18	-	2790	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1566.55981448004	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	213	False	NA	-17	True	AATAAA	-13	NA	35087396	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079692_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.76	chr18	-	3751	15	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	-225	intron_retention	FALSE	canonical	2	2	junction_6	1668.16226636942	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	213	False	NA	-17	True	AATAAA	-13	NA	35087396	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35074014_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.77	chr18	-	2783	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1564.94871621245	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	214	False	NA	-17	True	AATAAA	-13	NA	35087395	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084433_35085448_35085537_35085729_35085789_35087222
ES.16335.78	chr18	-	2965	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	193	-225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2131.28159708982	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	392	False	NA	-17	True	AATAAA	-13	NA	35087217	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079092_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086890
ES.16335.79	chr18	-	4379	6	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	786	-225	intron_retention	FALSE	canonical	3	5978	junction_2	219.428712797573	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	7218	False	NA	-17	True	AATAAA	-13	NA	35080391	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548
ES.16335.80	chr18	-	2806	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1566.45507436377	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	207	False	NA	-17	True	AATAAA	-13	NA	35087402	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079080_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.81	chr18	-	9181	13	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14	-225	intron_retention	FALSE	non_canonical	0	0	junction_11	1772.36045329072	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	213	False	NA	-17	True	AATAAA	-13	NA	35087396	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35083750_35084284_35085789_35087222
ES.16335.82	chr18	-	7668	12	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	8	-225	intron_retention	FALSE	canonical	3	5978	junction_5	276.008054739335	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	207	False	NA	-17	True	AATAAA	-13	NA	35087402	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35081071_35081158_35081233_35082069_35082195_35084276
ES.16335.83	chr18	-	3515	4	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-1944	-225	intron_retention	FALSE	canonical	3	5978	junction_2	256.812945329648	3768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	35075859	35070691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071778_35071985_35073368_35073892_35073998_35074917
ES.16335.85	chr18	-	2290	12	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-148	-226	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	1861.50610843358	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATCTCCTTTGTGAA	6284	False	NA	-18	True	AATAAA	-12	NA	35081325	35070692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35074014_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158
ES.16335.86	chr18	-	2792	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-226	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_5	1554.66610161153	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATCTCCTTTGTGAA	214	False	NA	-18	True	AATAAA	-12	NA	35087395	35070692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073352_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.88	chr18	-	4679	11	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-1489	-226	intron_retention	FALSE	non_canonical	0	0	junction_7	1934.80112931536	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATCTCCTTTGTGAA	4943	False	NA	-18	True	AATAAA	-12	NA	35082666	35070692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35076339_35078996_35079090_35079550_35079712_35080963_35081071_35081158_35081233_35082069
ES.16335.89	chr18	-	5245	15	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	7	-226	intron_retention	FALSE	canonical	1	2	junction_6	2252.05787185038	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATCTCCTTTGTGAA	206	False	NA	-18	True	AATAAA	-12	NA	35087403	35070692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35074014_35074917_35076339_35078996_35079086_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729
ES.16335.9	chr18	-	2971	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_14	1558.0326424192	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCCAGTCGTTGTAAT	214	False	NA	-24	True	NA	NA	NA	35087395	35070471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084401_35085448_35085537_35085729_35085789_35087222
ES.16335.90	chr18	-	4631	12	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	924	-226	intron_retention	FALSE	canonical	0	0	junction_10	1859.70009578991	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATCTCCTTTGTGAA	3907	False	NA	-18	True	AATAAA	-12	NA	35083702	35070692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079692_35080963_35081071_35081158
ES.16335.91	chr18	-	4520	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	13	-227	intron_retention	FALSE	canonical	3	5978	junction_5	279.443187245564	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGATCTCCTTTGTGA	212	False	NA	-19	True	AATAAA	-11	NA	35087397	35070693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.92	chr18	-	4393	10	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-968	-227	intron_retention	FALSE	canonical	3	5978	junction_4	240.97861182691	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGATCTCCTTTGTGA	5464	False	NA	-19	True	AATAAA	-11	NA	35082145	35070693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158
ES.16335.93	chr18	-	2806	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	10	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1567.27653784957	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGATCTCCTTTGTGA	209	False	NA	-19	True	AATAAA	-11	NA	35087400	35070693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35079002_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.94	chr18	-	3936	15	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	59	-227	intron_retention	FALSE	canonical	3	5978	junction_4	272.316901601717	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGATCTCCTTTGTGA	258	False	NA	-19	True	AATAAA	-11	NA	35087351	35070693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.95	chr18	-	2796	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	13	-227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2129.76119186518	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGATCTCCTTTGTGA	212	False	NA	-19	True	AATAAA	-11	NA	35087397	35070693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082077_35082195_35084276_35084459_35085453_35085537_35085729_35085789_35087222
ES.16335.96	chr18	-	5679	10	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	-1699	-229	intron_retention	FALSE	canonical	3	5978	junction_5	301.679373581364	3771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGATCTCCTTTGT	4733	False	NA	-21	True	AATAAA	-9	NA	35082876	35070695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35081071_35081158_35081233_35082069
ES.16335.97	chr18	-	2797	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	5	-231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1561.20061471132	3771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTTGATCTCCTTT	204	False	NA	-23	True	AATAAA	-7	NA	35087405	35070697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081055_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16335.98	chr18	-	2715	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	-362	696	-362	157	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTAGCCTGTTATTTT	NA	False	NA	0	True	AATAAA	-28	NA	35087772	35071162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ES.16336.1	chr18	+	190	1	Intergenic	novelGene_13633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGATTACTATTTACCA	NA	False	NA	NA	False	NA	NA	NA	35096502	35096692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35096500_35096700
ES.16337.1	chr18	+	177	1	Intergenic	novelGene_13634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	35106739	35106916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35106700_35106900
ES.16338.1	chr18	-	174	1	Intergenic	novelGene_13635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGGAAA	8085	False	NA	NA	False	NA	NA	NA	35110723	35110549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35110500_35110700
ES.16339.1	chr18	-	1144	1	Intergenic	novelGene_13636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATGGTGGCCTATGA	NA	False	NA	NA	False	NA	NA	NA	35182462	35181318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35181300_35182500
ES.1634.1	chr1	+	177	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACTGTCAATTCA	NA	False	NA	NA	False	NA	NA	NA	154888595	154888772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_154888600_154888800
ES.16340.1	chr18	+	160	1	Intergenic	novelGene_13637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	35186444	35186604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35186400_35186600
ES.16341.1	chr18	-	659	4	Antisense	novelGene_ENSMUSG00000118380.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCTCATATCAAACT	NA	False	NA	NA	False	AATAAA	-13	NA	35198826	35187275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_35187468_35188743_35188834_35193164_35193210_35198494
ES.16342.1	chr18	-	173	1	Intergenic	novelGene_13638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	7990	False	NA	NA	False	NA	NA	NA	35207065	35206892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35206900_35207100
ES.16343.1	chr18	+	175	1	Intergenic	novelGene_13639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAAGTTGCCG	NA	False	NA	NA	False	NA	NA	NA	35209535	35209710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35209500_35209700
ES.16344.1	chr18	-	175	1	Intergenic	novelGene_13640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	770	False	NA	NA	False	NA	NA	NA	35214285	35214110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35214100_35214300
ES.16345.1	chr18	+	4148	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	-408	-7	-408	7	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTCGTTCTTTGCCTTC	NA	False	NA	40	True	AATAAA	-28	NA	35251503	35387839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.10	chr18	+	3682	18	NNC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	-152	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.161506032163	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251759	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35251838_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.12	chr18	+	3521	17	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	451.248130190032	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251911	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287598_35308192_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.13	chr18	+	3679	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	437.608600460768	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251916	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385713_35385804_35386657
ES.16345.14	chr18	+	3860	19	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	558.933157623841	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251917	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35271037_35271175_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.15	chr18	+	1464	9	NNC	ENSMUSG00000037815.8	novel	1453	10	NA	NA	0	15912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	775.492011161301	1492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTGGTTTTGTCATAC	NA	False	NA	NA	False	ATTAAA	-19	NA	35251935	35332015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35321870_35321927_35331770
ES.16345.18	chr18	+	3700	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	437.72036071772	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCAGAAGTCGTTCT	NA	False	NA	32	True	AATAAA	-20	NA	35251937	35387831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382860_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.19	chr18	+	3389	13	ISM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	26	8540	-2	-4971	5prime_fragment	FALSE	canonical	3	1595	junction_4	166.151035707475	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	35251937	35379292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749
ES.16345.2	chr18	+	3690	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-342	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	425.561314147286	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251569	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35251579_35251959_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.21	chr18	+	3905	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	440.582412520316	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251939	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252544_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.23	chr18	+	3680	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	437.660594351092	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251947	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315594_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.24	chr18	+	3457	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	425.561314147286	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251950	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657_35386832_35387064
ES.16345.26	chr18	+	3400	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	465.69601911786	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251951	35387827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35385668_35385804_35386657
ES.16345.27	chr18	+	3260	13	ISM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	40	8655	12	-5086	5prime_fragment	FALSE	canonical	3	1595	junction_4	166.151035707475	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGAGTAGTACTCCA	NA	False	NA	NA	False	NA	NA	NA	35251951	35379177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749
ES.16345.28	chr18	+	9886	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	12	-4	intron_retention	FALSE	canonical	3	1584	junction_13	168.653754446466	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251951	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35382866_35383898_35384081_35384218_35385804_35386657
ES.16345.29	chr18	+	3536	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	451.343822483204	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251951	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.3	chr18	+	3687	18	NNC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	-291	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	435.161506032163	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251620	35387827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35251743_35285693_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.32	chr18	+	3584	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	425.561314147286	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251952	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657_35387111_35387214
ES.16345.33	chr18	+	3384	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-12	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	439.862928144161	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251953	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.34	chr18	+	5031	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	1584	junction_14	164.191770500229	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251953	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35385804_35386657
ES.16345.35	chr18	+	2607	12	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-8	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	512.746163417313	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAACCAAGTCTAAGA	NA	False	NA	17	True	AATAAA	-5	NA	35251957	35387816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.37	chr18	+	2079	7	FSM	ENSMUSG00000037815.8	ENSMUST00000236969.2	1656	7	18	-441	-8	441	multi-exon	FALSE	canonical	3	1595	junction_4	198.935221170667	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGAGTTTTTCCTA	NA	False	NA	NA	False	AATAAA	-25	NA	35251957	35316544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402
ES.16345.39	chr18	+	3627	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	418.00280623551	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251957	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285707_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.42	chr18	+	3720	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	547.634793711969	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251958	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35286179_35286218_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.43	chr18	+	3660	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	437.826655116835	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251958	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377887_35382759_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.44	chr18	+	3819	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	1584	junction_14	162.927886175909	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTAAGAAGCAGAAGTCG	NA	False	NA	28	True	AATAAA	-16	NA	35251958	35387827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384325_35385668_35385804_35386657
ES.16345.45	chr18	+	3750	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	437.72036071772	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251958	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383828_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.46	chr18	+	3673	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	580.203669048942	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251959	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377009_35377203_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.48	chr18	+	4768	11	ISM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	56	12087	2	3222	5prime_fragment	FALSE	canonical	3	1595	junction_4	175.811518393989	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACAGGTATCTAGATG	NA	False	NA	NA	False	AATAAA	-16	NA	35251967	35375745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435
ES.16345.5	chr18	+	3625	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	-286	394	-286	-394	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGCTTTCTTTATGA	NA	False	NA	NA	False	AATAAA	-39	NA	35251625	35387438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.50	chr18	+	3521	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	449.217496737382	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251967	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.53	chr18	+	5554	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	4	-6	intron_retention	FALSE	canonical	3	1584	junction_13	168.851282362781	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251969	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377902_35382754_35382866_35383898_35384081_35384218_35385804_35386657
ES.16345.54	chr18	+	3645	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	437.790180582586	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCAAGTCTAAGAAGC	NA	False	NA	20	True	AATAAA	-8	NA	35251970	35387819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307464_35308156_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.55	chr18	+	3657	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	437.72036071772	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAAGTCGTTCTT	NA	False	NA	33	True	AATAAA	-21	NA	35251970	35387832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382849_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.56	chr18	+	3758	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	566.066534064375	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251970	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35319703_35319785_35355108_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.57	chr18	+	3561	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	1	118	junction_1	399.513292762268	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251970	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.59	chr18	+	4211	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-4	intron_retention	FALSE	canonical	3	1584	junction_13	163.654349449533	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251970	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.6	chr18	+	4268	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-278	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	561.505219130785	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251633	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35252282_35252544_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.60	chr18	+	3149	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	59	525	5	349	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATGACCAAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	35251970	35387307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.61	chr18	+	3439	16	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	465.875214575272	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCAGAAGTCGTTCT	NA	False	NA	32	True	AATAAA	-20	NA	35251970	35387831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.62	chr18	+	4484	19	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	565.462052956105	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGAAGTCGTTCTTT	NA	False	NA	34	True	AATAAA	-22	NA	35251970	35387833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35321870_35322680_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.63	chr18	+	3673	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	575.732630900609	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251970	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252013_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377722_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.65	chr18	+	3225	17	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	451.250203427932	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251970	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307391_35312978_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.66	chr18	+	3644	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	418.00280623551	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35251973	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285764_35287423_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.67	chr18	+	3639	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_14	434.641959799089	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTCTAAGAAGCAGAAG	NA	False	NA	25	True	AATAAA	-13	NA	35251982	35387824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383913_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.68	chr18	+	4121	18	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	63	-4	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	432.968988876478	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35252028	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252544_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.69	chr18	+	4155	19	NIC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	166	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	560.751064352837	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35252131	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35252544_35271037_35271175_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.7	chr18	+	7796	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-205	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	437.826655116835	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCAGAAGTCGTTCT	NA	False	NA	32	True	AATAAA	-20	NA	35251706	35387831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35378359_35379352_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.70	chr18	+	3698	18	NNC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	382	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.161506032163	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCAGAAGTCGTTCT	NA	False	NA	32	True	AATAAA	-20	NA	35252876	35387831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252966_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.71	chr18	+	193	1	Intergenic	novelGene_13646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCCCAATCTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	35280079	35280272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35280100_35280300
ES.16345.72	chr18	+	5471	13	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	23	-1778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	504.732519921856	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCCAAGGATGGTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	35285674	35382485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35378362_35379354
ES.16345.73	chr18	+	5019	11	ISM	ENSMUSG00000037815.8	ENSMUST00000237855.2	2542	16	27278	-867	27278	-7	intron_retention	FALSE	canonical	3	1584	junction_9	109.706152972383	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCTAAGAAGCAGAAGT	NA	False	NA	26	True	AATAAA	-14	NA	35312929	35387825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218
ES.16345.74	chr18	+	7255	12	NNC	ENSMUSG00000037815.8	novel	667	3	NA	NA	-31158	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	674.372950253091	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35316824	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35318359_35320041_35322680_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.75	chr18	+	4350	11	ISM	ENSMUSG00000037815.8	ENSMUST00000237855.2	2542	16	67656	-868	5299	-6	3prime_fragment	FALSE	canonical	3	1584	junction_7	138.300542298286	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35353307	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.76	chr18	+	9178	7	NIC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	8486	-6	intron_retention	FALSE	canonical	3	1584	junction_4	170.545611364103	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35356494	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35356629_35368660_35368754_35372435_35372593_35377007_35382866_35383898_35384081_35384218_35385804_35386657
ES.16345.77	chr18	+	3949	9	NNC	ENSMUSG00000037815.8	novel	667	3	NA	NA	-13169	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	578.635450326888	1603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35369256	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35370993_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.78	chr18	+	3188	7	NIC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	-9942	-16	intron_retention	FALSE	canonical	3	1600	junction_1	129.121067219877	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAACCAAGTCTAAGA	NA	False	NA	17	True	AATAAA	-5	NA	35372483	35387816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35372593_35377007_35377209_35377749_35377902_35382754_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.8	chr18	+	3924	18	NNC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	-205	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	437.878694235118	1621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35251706	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35252035_35285653_35285761_35287397_35287586_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ES.16345.80	chr18	+	7006	5	NNC	ENSMUSG00000037815.8	novel	2542	16	NA	NA	-4624	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	768.817436066587	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	False	NA	27	True	AATAAA	-15	NA	35377801	35387826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35378359_35379352_35382866_35383898_35384081_35384218_35385804_35386657
ES.16345.81	chr18	+	3793	2	FSM	ENSMUSG00000037815.8	ENSMUST00000236483.2	658	2	-97	-3038	-97	-4	multi-exon	FALSE	canonical	3	1645	junction_1	0	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGAAGCAGAAGTCGT	NA	False	NA	29	True	AATAAA	-17	NA	35383897	35387828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35384081_35384218
ES.16346.1	chr18	+	6000	1	Intergenic	novelGene_13649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTAAATGATTCCTAG	NA	False	NA	NA	False	NA	NA	NA	35466819	35472819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35466800_35472800
ES.16347.1	chr18	+	161	1	Intergenic	novelGene_13650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35490148	35490309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35490100_35490300
ES.16348.1	chr18	+	1746	1	Intergenic	novelGene_13651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAAGTCCTACGGAG	4735	False	NA	NA	False	NA	NA	NA	35499991	35501737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35500000_35501700
ES.16349.1	chr18	+	207	1	Intergenic	novelGene_13653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATATATATATGGT	83	False	NA	NA	False	NA	NA	NA	35599327	35599534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35599300_35599500
ES.1635.1	chr1	+	177	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGATTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	154897345	154897522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_154897300_154897500
ES.16350.1	chr18	+	173	1	Intergenic	novelGene_13654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	35626358	35626531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35626400_35626500
ES.16351.1	chr18	-	3814	1	Intergenic	novelGene_13641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGCTATAGACCTCT	7144	False	NA	NA	False	AATAAA	-14	NA	35251839	35248025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35248000_35251800
ES.16351.2	chr18	-	2143	2	Intergenic	novelGene_13642	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGGTCTTTGATTAT	7326	False	NA	NA	False	AATAAA	-13	NA	35251657	35249301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35251219_35251431
ES.16351.3	chr18	-	517	2	Intergenic	novelGene_13643	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGCTGGAGATGTCTC	7469	False	NA	NA	False	AATAAA	-15	NA	35251514	35250784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35251219_35251431
ES.16352.1	chr18	-	2203	1	Intergenic	novelGene_13644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATGACACTAGAAAAGC	3521	False	NA	NA	False	NA	NA	NA	35255462	35253259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35253300_35255500
ES.16353.1	chr18	-	1874	1	Intergenic	novelGene_13645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTTTGGGGGTAG	NA	False	NA	NA	False	NA	NA	NA	35265549	35263675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35263700_35265500
ES.16354.1	chr18	-	303	1	Intergenic	novelGene_13647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	35305817	35305514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35305500_35305800
ES.16355.1	chr18	-	11532	1	FSM	ENSMUSG00000071862.4	ENSMUST00000236530.2	2872	1	-1205	-7455	-1189	4321	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACACAATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	35349266	35337734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35337700_35349300
ES.16355.2	chr18	-	9768	2	NNC	ENSMUSG00000071862.4	novel	5673	2	NA	NA	521	4321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACACAATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	35347540	35337734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35341934_35341971
ES.16356.1	chr18	-	3418	11	NNC	ENSMUSG00000024357.11	novel	342	3	NA	NA	0	46656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0030507685832	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAATGTGCCTCTTTCTG	NA	False	NA	NA	False	ATTAAA	-37	NA	35631922	35352792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35354976_35355097_35355204_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16356.10	chr18	-	3790	9	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	1	-6	intron_retention	FALSE	canonical	3	128	junction_2	11.4972822875669	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAATGGTCTGTCTCTTG	NA	False	NA	-8	True	ATTAAA	-12	NA	35631946	35399454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16356.11	chr18	-	1127	6	NNC	ENSMUSG00000024357.11	novel	1532	8	NA	NA	-407	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	55.3013562220675	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAATGGTCTGTCTCTTG	NA	False	NA	-8	True	ATTAAA	-12	NA	35458915	35399454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35458872
ES.16356.12	chr18	-	4417	1	Genic_Genomic	ENSMUSG00000024357.11	novel	NA	NA	NA	NA	17905	941	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGTGACATGAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	35414963	35410546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_35410500_35415000
ES.16356.13	chr18	-	262	1	Intergenic	novelGene_13652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTGCGTAACTATAT	NA	False	NA	NA	False	NA	NA	NA	35545588	35545326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35545300_35545600
ES.16356.14	chr18	-	3626	4	NNC	ENSMUSG00000024357.11	novel	453	3	NA	NA	0	3993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1957965469036	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACTTAGGTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	35631922	35547118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35550413_35551109_35551249_35571319_35571434_35631843
ES.16356.15	chr18	-	481	3	FSM	ENSMUSG00000024357.11	ENSMUST00000235524.2	335	3	-23	-123	-5	-6	multi-exon	FALSE	canonical	1	2	junction_1	67	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCCTAGGAAGTAATT	NA	False	NA	NA	False	NA	NA	NA	35631952	35563102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35563361_35571319_35571434_35631843
ES.16356.2	chr18	-	2420	12	NNC	ENSMUSG00000024357.11	novel	355	4	NA	NA	1	45545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4257419127903	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35631946	35353903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35354976_35355097_35355204_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35626197_35626287_35631843
ES.16356.3	chr18	-	2571	1	Antisense	novelGene_ENSMUSG00000037815.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACCTTTAACAAAATATAA	NA	False	NA	NA	False	NA	NA	NA	35358298	35355727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_35355700_35358300
ES.16356.4	chr18	-	3629	1	Intergenic	novelGene_13648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35382024	35378395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35378400_35382000
ES.16356.5	chr18	-	7744	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	53	-6094	0	6094	multi-exon	TRUE	canonical	3	128	junction_3	10.8423039781937	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATAAAAAGCTACAA	NA	False	NA	NA	False	NA	NA	NA	35631929	35393354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16356.6	chr18	-	1687	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	18	-2	-17	2	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTCTTGTGTCTGTC	NA	False	NA	0	True	ATTAAA	-20	NA	35631964	35399446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16356.7	chr18	-	1729	10	NNC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.2098022882829	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTGTCTCTTGTGTC	NA	False	NA	-4	True	ATTAAA	-16	NA	35631926	35399450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35399963_35402091_35402257_35402666_35402848_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16356.8	chr18	-	1545	9	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	47.6377935572167	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGGTCTGTCTCTTGTGT	NA	False	NA	-5	True	ATTAAA	-15	NA	35631966	35399451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35571319_35571434_35631843
ES.16356.9	chr18	-	1525	9	NIC	ENSMUSG00000024357.11	novel	1703	10	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	49.6714203541634	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGGTCTGTCTCTTGTG	NA	False	NA	-6	True	ATTAAA	-14	NA	35631930	35399452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35399963_35402091_35402257_35402666_35402764_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ES.16357.1	chr18	+	175	1	Intergenic	novelGene_13655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAAGCGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	35652961	35653136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35653000_35653100
ES.16357.2	chr18	+	310	1	Intergenic	novelGene_13656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35652963	35653273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35653000_35653300
ES.16358.1	chr18	+	171	1	Intergenic	novelGene_13657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATATTTCCTCCTAT	NA	False	NA	NA	False	NA	NA	NA	35678602	35678773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35678600_35678800
ES.16359.1	chr18	-	175	1	Intergenic	novelGene_13658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	35681359	35681184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35681200_35681400
ES.1636.1	chr1	-	2154	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	-42	1164	-42	-1164	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCCTGTTTGTATGT	NA	False	NA	-3	True	ATTAAA	-15	NA	154975424	154973270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_154973300_154975400
ES.16360.1	chr18	+	1076	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	11	103	11	-103	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTATGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	35686434	35691266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ES.16360.10	chr18	+	3521	2	FSM	ENSMUSG00000117869.2_ENSMUSG00000065649.3	ENSMUST00000235277.2	1586	2	-13	-1922	1	4	multi-exon	FALSE	canonical	3	167	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATTTCATTGGCAT	NA	False	NA	NA	False	NA	NA	NA	35686461	35690939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35686523_35687479
ES.16360.101	chr18	+	5271	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	81	910	20	-910	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTGTTACAATGTTGAA	NA	False	NA	NA	False	TATAAA	-17	NA	35695291	35725978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.102	chr18	+	2721	14	NNC	ENSMUSG00000037236.17	novel	1888	14	NA	NA	20	-13	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	401.830324225855	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695291	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712434_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.103	chr18	+	3964	12	NIC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	21	50	intron_retention	FALSE	canonical	3	171	junction_1	322.233707087684	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695292	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.104	chr18	+	3802	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	21	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	328.748314188275	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAAAATATTTGTCCG	NA	False	NA	0	True	NA	NA	NA	35695292	35724516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717573_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.105	chr18	+	2827	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	21	-14	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTGTACACTTTTG	NA	False	NA	NA	False	AATACA	-15	NA	35695292	35723568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.106	chr18	+	5002	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	21	68	intron_retention	FALSE	canonical	3	826	junction_2	190.159633967182	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	NA	False	NA	9	True	AATAAA	-17	NA	35695292	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.109	chr18	+	4708	12	NIC	ENSMUSG00000037236.17	novel	1888	14	NA	NA	35	4	intron_retention	FALSE	canonical	3	171	junction_1	320.950937266479	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695306	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35714349_35714649_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.11	chr18	+	3972	18	NNC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	427.040706146244	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35686462	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690476_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.111	chr18	+	3784	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-14	50	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	318.785610255737	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695337	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695361_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.112	chr18	+	2901	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237365.2	1951	14	-6	-944	-6	54	multi-exon	FALSE	canonical	3	55	junction_1	322.705042381891	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695345	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.113	chr18	+	3463	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237365.2	1951	14	1	-1513	1	623	multi-exon	FALSE	canonical	3	55	junction_1	322.705042381891	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCATGGTGGCATATAT	NA	False	NA	NA	False	AATAAA	-13	NA	35695352	35725095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.114	chr18	+	2852	15	NNC	ENSMUSG00000037236.17	novel	3107	15	NA	NA	13	137171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	406.011115008203	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	35695364	35864059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432_35724471_35864033
ES.16360.115	chr18	+	3914	15	FSM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	-120	-687	26	6	multi-exon	FALSE	canonical	3	37	junction_1	318.569899099467	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCATGTTGATTGGTTG	NA	False	NA	38	True	AATAAA	-14	NA	35695377	35724478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.116	chr18	+	2972	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237365.2	1951	14	36	-1057	36	167	multi-exon	FALSE	canonical	3	55	junction_1	322.705042381891	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGACTTCTTGTTCTTG	NA	False	NA	6	True	ACTAAA	-17	NA	35695387	35724639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.117	chr18	+	4182	15	FSM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	-78	-997	68	316	multi-exon	FALSE	canonical	3	37	junction_1	318.569899099467	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCTTGTCGCTGCTTCA	NA	False	NA	6	True	ATTAAA	-16	NA	35695419	35724788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.118	chr18	+	2971	13	NIC	ENSMUSG00000037236.17	novel	3107	15	NA	NA	-7	311	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	433.48077619813	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCGTCTTGTCGCTG	NA	False	NA	1	True	ATTAAA	-11	NA	35695490	35724783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695575_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.119	chr18	+	3005	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237365.2	1951	14	147	-1201	1	311	multi-exon	FALSE	canonical	3	55	junction_1	322.705042381891	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCGTCTTGTCGCTG	NA	False	NA	1	True	ATTAAA	-11	NA	35695498	35724783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.12	chr18	+	4538	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	4334	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCATGGTGGCATATAT	NA	False	NA	NA	False	AATAAA	-13	NA	35686462	35725095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.120	chr18	+	3886	15	NNC	ENSMUSG00000037236.17	novel	3107	15	NA	NA	13	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	326.591581680376	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAAAATATTTGTCCGT	NA	False	NA	1	True	NA	NA	NA	35695518	35724517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695649_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.121	chr18	+	3799	15	NNC	ENSMUSG00000037236.17	novel	1504	6	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	326.591581680376	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTCATGTTGATTGGTT	NA	False	NA	37	True	AATAAA	-13	NA	35695742	35724477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695826_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.122	chr18	+	3923	15	NIC	ENSMUSG00000037236.17	novel	1504	6	NA	NA	4	50	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	326.155903624919	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695745	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695908_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.123	chr18	+	5901	14	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	7258	-731	-2224	50	3prime_fragment	FALSE	canonical	3	826	junction_1	180.667762029329	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35702755	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.124	chr18	+	10745	11	NIC	ENSMUSG00000037236.17	novel	3107	15	NA	NA	-630	623	intron_retention	FALSE	canonical	3	945	junction_1	184.511490157117	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCATGGTGGCATATAT	1133	False	NA	NA	False	AATAAA	-13	NA	35704349	35725095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.125	chr18	+	4340	14	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	9395	-1307	-87	626	3prime_fragment	FALSE	canonical	3	826	junction_1	180.667762029329	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGTGGCATATATCTT	1676	False	NA	NA	False	AATAAA	-16	NA	35704892	35725098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.126	chr18	+	3703	14	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-85	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	338.885957672625	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	1678	False	NA	19	True	NA	NA	NA	35704894	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712376_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.127	chr18	+	3099	14	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	9397	-68	-85	68	3prime_fragment	FALSE	canonical	3	826	junction_1	180.667762029329	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	1678	False	NA	9	True	AATAAA	-17	NA	35704894	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.128	chr18	+	3879	14	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	9397	-848	-85	167	3prime_fragment	FALSE	canonical	3	826	junction_1	180.667762029329	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGACTTCTTGTTCTTG	1678	False	NA	6	True	ACTAAA	-17	NA	35704894	35724639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.129	chr18	+	4822	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-85	314	intron_retention	FALSE	canonical	3	826	junction_1	186.18007635978	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCGTCTTGTCGCTGCTT	1678	False	NA	4	True	ATTAAA	-14	NA	35704894	35724786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35705989_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.13	chr18	+	3171	17	NNC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	4029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	482.102621336993	1194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGTCGCTGCTTCAAA	NA	False	NA	8	True	ATTAAA	-18	NA	35686462	35724790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690459_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716970_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.131	chr18	+	7549	11	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	1947	4	intron_retention	FALSE	canonical	3	945	junction_1	184.511490157117	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	3710	False	NA	36	True	AATAAA	-12	NA	35706926	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.132	chr18	+	4511	13	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	13270	-731	-2186	50	3prime_fragment	FALSE	canonical	3	945	junction_3	172.790576517741	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	5551	False	NA	6	True	NA	NA	NA	35708767	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.133	chr18	+	5264	12	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	13505	-8	-2185	8	3prime_fragment	FALSE	canonical	3	945	junction_2	177.209825670163	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGTTGATTGGTTGGT	5552	False	NA	-36	True	AATAAA	-16	NA	35708768	35724480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.134	chr18	+	3740	11	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	-835	68	intron_retention	FALSE	canonical	3	945	junction_1	184.511490157117	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	6902	False	NA	9	True	AATAAA	-17	NA	35710118	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.135	chr18	+	2006	13	ISM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	15112	-68	-344	68	3prime_fragment	FALSE	canonical	3	945	junction_3	172.790576517741	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	7393	False	NA	9	True	AATAAA	-17	NA	35710609	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.136	chr18	+	4632	11	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	298	8	intron_retention	FALSE	canonical	3	945	junction_2	183.426933682052	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGTTGATTGGTTGGT	8035	False	NA	-36	True	AATAAA	-16	NA	35711251	35724480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35711511_35711957_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.137	chr18	+	5184	1	FSM	ENSMUSG00000037236.17	ENSMUST00000235551.2	1700	1	51	-3535	51	3535	mono-exon	FALSE	NA	NA	NA	NA	NA	1080	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTCACATCACATCTATA	8914	False	NA	NA	False	NA	NA	NA	35712130	35717314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35712100_35717300
ES.16360.138	chr18	+	3480	9	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	262	624	intron_retention	FALSE	canonical	3	997	junction_2	60.6300255648965	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGGTGGCATATATC	9125	False	NA	NA	False	AATAAA	-14	NA	35712341	35725096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35721507_35723432
ES.16360.139	chr18	+	2999	9	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	17162	-51	588	-14	3prime_fragment	FALSE	canonical	3	997	junction_1	192.082298442621	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTGTACACTTTTG	9451	False	NA	NA	False	AATACA	-15	NA	35712667	35723568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.14	chr18	+	4085	19	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3715	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	458.60646407229	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35686462	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35692395_35692562_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.140	chr18	+	4038	9	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	17585	-316	769	316	3prime_fragment	FALSE	canonical	3	997	junction_1	192.082298442621	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCTTGTCGCTGCTTCA	9632	False	NA	6	True	ATTAAA	-16	NA	35712848	35724788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.141	chr18	+	4277	7	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	1304	311	intron_retention	FALSE	canonical	3	1000	junction_5	56.7998435052617	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCGTCTTGTCGCTG	NA	False	NA	1	True	ATTAAA	-11	NA	35713383	35724783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35721507_35723432
ES.16360.142	chr18	+	1492	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	-16	-1	-16	0	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTTGTGTTATTGGT	4624	False	NA	23	True	AATAAA	-17	NA	35731653	35750240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ES.16360.143	chr18	+	715	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	0	760	0	37	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCTGTCACACAATTA	4640	False	NA	16	True	AATAAA	-23	NA	35731669	35749479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ES.16360.144	chr18	+	1424	4	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1390.43614260658	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAATGATAGT	4640	False	NA	-6	True	NA	NA	NA	35731669	35750211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35731792_35743925_35744088_35746375_35746556_35749251
ES.16360.146	chr18	+	1295	3	NIC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	1533	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4655	False	NA	21	True	AATAAA	-15	NA	35731684	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35731813_35746375_35746556_35749251
ES.16360.147	chr18	+	818	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	17	640	-7	27	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTGTCTGTCTTTGA	4657	False	NA	8	True	ATTAAA	-16	NA	35731686	35749599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ES.16360.148	chr18	+	1537	4	FSM	ENSMUSG00000037058.17	ENSMUST00000236868.2	683	4	-58	-796	-3	-1	multi-exon	FALSE	canonical	3	144	junction_1	1322.78519294202	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4661	False	NA	21	True	AATAAA	-15	NA	35731690	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731897_35743923_35744088_35746375_35746556_35749251
ES.16360.15	chr18	+	4281	18	NNC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	-1	4025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	427.040706146244	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCGTCTTGTCGCTGCTT	NA	False	NA	4	True	ATTAAA	-14	NA	35686463	35724786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690476_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.150	chr18	+	1460	4	NNC	ENSMUSG00000037058.17	novel	857	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1368.5891356511	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4664	False	NA	21	True	AATAAA	-15	NA	35731693	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35731813_35743923_35744088_35746375_35746556_35749241
ES.16360.153	chr18	+	849	3	ISM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	25	3297	1	15	5prime_fragment	FALSE	canonical	3	2803	junction_2	95.5	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGAGGAGCCCTTTT	4665	False	NA	NA	False	AATAAA	-22	NA	35731694	35746942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35731813_35743923_35744088_35746375
ES.16360.156	chr18	+	4932	3	NNC	ENSMUSG00000037058.17	novel	718	4	NA	NA	1	27	intron_retention	TRUE	canonical	0	0	junction_1	1538.5	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTGTCTGTCTTTGA	4665	False	NA	8	True	ATTAAA	-16	NA	35731694	35749599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35735715_35745991_35746556_35749251
ES.16360.157	chr18	+	2186	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	25	-736	1	735	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGAAGCAAGTGTTTT	4665	False	NA	NA	False	TTTAAA	-18	NA	35731694	35750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ES.16360.158	chr18	+	883	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	1	-27	1	27	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTGTCTGTCTTTGA	4665	False	NA	8	True	ATTAAA	-16	NA	35731694	35749599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ES.16360.159	chr18	+	521	3	NIC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	1	32	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	1533	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAGGAGCTGTCACAC	4665	False	NA	11	True	AATAAA	-18	NA	35731694	35749474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35731813_35746375_35746556_35749251
ES.16360.16	chr18	+	2866	3	NIC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	5	2	intron_retention	FALSE	canonical	3	167	junction_1	17.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATTTCATTGGC	NA	False	NA	NA	False	NA	NA	NA	35686469	35690937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35689745_35690389
ES.16360.161	chr18	+	1440	4	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	2	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1390.43614260658	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAATGATAGT	4666	False	NA	-6	True	NA	NA	NA	35731695	35750211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35731813_35743904_35744088_35746375_35746556_35749251
ES.16360.163	chr18	+	1521	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	2	-666	2	-1	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4666	False	NA	21	True	AATAAA	-15	NA	35731695	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ES.16360.167	chr18	+	1525	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236666.2	713	5	23	-835	-2	-1	multi-exon	FALSE	canonical	2	2	junction_1	1472.19071454754	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4670	False	NA	21	True	AATAAA	-15	NA	35731699	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35742645_35742727_35743923_35744088_35746375_35746556_35749251
ES.16360.168	chr18	+	1526	5	FSM	ENSMUSG00000037058.17	ENSMUST00000235400.2	1522	5	-2	-2	-2	-1	multi-exon	FALSE	canonical	3	31	junction_1	1449.29120607282	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4670	False	NA	21	True	AATAAA	-15	NA	35731699	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ES.16360.169	chr18	+	757	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	7	93	-1	37	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCTGTCACACAATTA	4671	False	NA	16	True	AATAAA	-23	NA	35731700	35749479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ES.16360.17	chr18	+	3295	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	4	3098	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	NA	False	NA	9	True	AATAAA	-17	NA	35686469	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.170	chr18	+	1515	5	NNC	ENSMUSG00000037058.17	novel	1522	5	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1465.4963962767	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4680	False	NA	21	True	AATAAA	-15	NA	35731709	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35731813_35741790_35741867_35743918_35744088_35746375_35746556_35749251
ES.16360.171	chr18	+	751	5	FSM	ENSMUSG00000037058.17	ENSMUST00000235400.2	1522	5	14	757	14	37	multi-exon	FALSE	canonical	3	31	junction_1	1449.29120607282	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCTGTCACACAATTA	4686	False	NA	16	True	AATAAA	-23	NA	35731715	35749479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ES.16360.172	chr18	+	3364	3	ISM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	46	761	14	36	intron_retention	FALSE	canonical	3	2803	junction_2	95.5	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGCTGTCACACAATT	4686	False	NA	15	True	AATAAA	-22	NA	35731715	35749478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35731813_35743923_35744088_35746375
ES.16360.173	chr18	+	749	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236666.2	713	5	40	-76	15	37	multi-exon	FALSE	canonical	2	2	junction_1	1472.19071454754	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGCTGTCACACAATTA	4687	False	NA	16	True	AATAAA	-23	NA	35731716	35749479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35731813_35742645_35742727_35743923_35744088_35746375_35746556_35749251
ES.16360.174	chr18	+	1499	5	NNC	ENSMUSG00000037058.17	novel	1522	5	NA	NA	15	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	1471.44340275119	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	4687	False	NA	21	True	AATAAA	-15	NA	35731716	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35731813_35742309_35742382_35743923_35744088_35746375_35746556_35749251
ES.16360.175	chr18	+	1931	5	NIC	ENSMUSG00000037058.17	novel	1569	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	6	junction_1	1462.74989318065	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	5255	False	NA	21	True	AATAAA	-15	NA	35732284	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35732812_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ES.16360.176	chr18	+	1723	8	NNC	ENSMUSG00000037058.17	novel	766	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1328.91287471054	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	5260	False	NA	21	True	AATAAA	-15	NA	35732289	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35732364_35732765_35732812_35733097_35733171_35737278_35737413_35738666_35738732_35743923_35744088_35746375_35746556_35749251
ES.16360.177	chr18	+	1834	3	ISM	ENSMUSG00000037058.17	ENSMUST00000235476.2	1569	7	10784	2	84	-1	3prime_fragment	FALSE	canonical	3	2803	junction_1	137	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTTGTGTTATTG	2728	False	NA	21	True	AATAAA	-15	NA	35743420	35750238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35744088_35746375_35746556_35749251
ES.16360.178	chr18	+	167	1	Intergenic	novelGene_13664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAATGATTCTGC	216	False	NA	NA	False	NA	NA	NA	35774019	35774186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35774000_35774200
ES.16360.179	chr18	+	179	1	Intergenic	novelGene_13666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3833	False	NA	NA	False	NA	NA	NA	35777636	35777815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35777600_35777800
ES.16360.18	chr18	+	2971	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	6	3878	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	434.874982035067	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGACTTCTTGTTCTTG	NA	False	NA	6	True	ACTAAA	-17	NA	35686480	35724639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.180	chr18	+	1879	3	Antisense	novelGene_ENSMUSG00000024352.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGACAATCCTAGGCTC	NA	False	NA	NA	False	NA	NA	NA	35790821	35792869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_35792248_35792367_35792626_35792674
ES.16360.181	chr18	+	806	1	Antisense	novelGene_ENSMUSG00000024350.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATAAATCAGTTACCGG	9861	False	NA	NA	False	AAGAAA	-10	NA	35805378	35806184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_35805400_35806200
ES.16360.182	chr18	+	157	1	Intergenic	novelGene_13669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	35827496	35827653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35827500_35827700
ES.16360.183	chr18	+	2829	2	FSM	ENSMUSG00000073598.4	ENSMUST00000097617.3	2504	2	-2	-323	-2	323	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTGGAGGGATGGCTC	1340	False	NA	NA	False	NA	NA	NA	35860039	35864245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35860150_35861526
ES.16360.19	chr18	+	3808	2	FSM	ENSMUSG00000117869.2_ENSMUSG00002076696.1	ENSMUST00000235976.2	613	2	-2709	-486	8	0	multi-exon	FALSE	canonical	3	202	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACATTGGAATTTCATTG	NA	False	NA	NA	False	NA	NA	NA	35686482	35690935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35689745_35690389
ES.16360.2	chr18	+	735	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	24	431	-13	3	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATTTCATTGGCA	NA	False	NA	NA	False	NA	NA	NA	35686447	35690938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ES.16360.20	chr18	+	2810	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	-7	3698	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	439.881500378227	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35686483	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690445_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.21	chr18	+	3269	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	2	4022	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	471.977830691612	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCGTCTTGTCGCTG	NA	False	NA	1	True	ATTAAA	-11	NA	35686492	35724783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35692395_35692562_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.22	chr18	+	2876	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	4	3761	combination_of_known_splicesites	FALSE	canonical	1	13	junction_4	438.553014006004	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35686494	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690459_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.23	chr18	+	4199	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	4	4027	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCTTGTCGCTGCTTCA	NA	False	NA	6	True	ATTAAA	-16	NA	35686494	35724788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.24	chr18	+	3050	15	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	3187	4021	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	383.922026522287	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATTCGTCTTGTCGCT	NA	False	NA	0	True	ATTAAA	-10	NA	35689677	35724782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35689745_35690389_35690445_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.25	chr18	+	3400	13	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	3198	3761	intron_retention	FALSE	canonical	3	44	junction_2	402.672081917229	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35689688	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35689745_35690389_35690423_35710610_35710673_35711468_35712071_35712318_35712372_35714222_35714349_35714649_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.26	chr18	+	3313	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	-37	2986	-17	111	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTGCAGACTTTTCAT	NA	False	NA	52	True	NA	NA	NA	35695173	35723902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.27	chr18	+	4301	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	-21	1982	-1	434	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACAGTTGTATTTAAAATT	NA	False	NA	NA	False	TTTAAA	-35	NA	35695189	35724906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.28	chr18	+	6082	10	NIC	ENSMUSG00000037236.17	novel	1846	14	NA	NA	4	4	intron_retention	FALSE	canonical	3	44	junction_1	389.946086808528	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695194	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35710610_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.29	chr18	+	3900	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	0	2362	0	54	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695210	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.3	chr18	+	3214	3	NIC	ENSMUSG00000117869.2	novel	1190	4	NA	NA	-10	-103	intron_retention	FALSE	canonical	3	167	junction_1	17.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTATGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	35686450	35691266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35689745_35690389
ES.16360.30	chr18	+	3867	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	0	54	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695210	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.31	chr18	+	3246	13	NIC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	4	50	intron_retention	FALSE	canonical	3	171	junction_1	308.710613772114	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695214	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711468_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.32	chr18	+	4472	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	4	1786	4	630	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCATATATCTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	35695214	35725102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.35	chr18	+	4124	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	7	318	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGTCGCTGCTTCAAA	NA	False	NA	8	True	ATTAAA	-18	NA	35695217	35724790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.36	chr18	+	3498	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	290.548941660437	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695217	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35723432
ES.16360.37	chr18	+	3370	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-51	-1465	10	627	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGGCATATATCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	35695220	35725099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.38	chr18	+	2520	6	ISM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	11	13484	11	-375	5prime_fragment	FALSE	canonical	3	826	junction_2	80.4104470824532	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTGGTTTTTTTGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	35695221	35713404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318
ES.16360.39	chr18	+	3863	16	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	13	769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	317.736676440658	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTATATAAAAATGAAAGC	NA	False	NA	NA	False	NA	NA	NA	35695223	35725241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432_35724475_35725213
ES.16360.4	chr18	+	2888	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	-6	3765	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	434.874982035067	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35686450	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.40	chr18	+	4043	16	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	13	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	397.201409866581	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695223	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35695947_35696154_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.41	chr18	+	3168	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-2	68	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	NA	False	NA	9	True	AATAAA	-17	NA	35695242	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.42	chr18	+	2606	12	NNC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	465.723572820822	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695244	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35711957_35712071_35712318_35712376_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.43	chr18	+	2739	14	FSM	ENSMUSG00000037236.17	ENSMUST00000236507.2	1846	14	-18	-875	1	54	multi-exon	FALSE	canonical	3	44	junction_1	325.222090707295	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695245	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.44	chr18	+	3494	13	NIC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	171	junction_1	308.531017709547	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTTAGG	NA	False	NA	22	True	NA	NA	NA	35695255	35724462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.45	chr18	+	4379	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-8	164	intron_retention	FALSE	canonical	3	49	junction_1	327.748731148163	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATGGACTTCTTGTTC	NA	False	NA	3	True	ACTAAA	-14	NA	35695255	35724636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.46	chr18	+	1368	5	ISM	ENSMUSG00000037236.17	ENSMUST00000236507.2	1846	14	-8	10239	-8	-367	5prime_fragment	FALSE	canonical	3	44	junction_1	410.322129551892	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGGTCAGCCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	35695255	35713412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318
ES.16360.48	chr18	+	3767	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-8	8	combination_of_known_splicesites	FALSE	canonical	2	22	junction_3	336.144235032467	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGTTGATTGGTTGGT	NA	False	NA	-36	True	AATAAA	-16	NA	35695255	35724480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.49	chr18	+	3368	16	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-4	316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	394.190794187564	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCTTGTCGCTGCTTCA	NA	False	NA	6	True	ATTAAA	-16	NA	35695259	35724788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695313_35704895_35705108_35705819_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.5	chr18	+	4160	2	FSM	ENSMUSG00000117869.2_ENSMUSG00002076696.1	ENSMUST00000235976.2	613	2	-2730	-817	1	-103	multi-exon	FALSE	canonical	3	202	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTATGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	35686461	35691266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35689745_35690389
ES.16360.50	chr18	+	3966	12	NIC	ENSMUSG00000037236.17	novel	1846	14	NA	NA	-2	54	intron_retention	FALSE	canonical	3	44	junction_1	353.384883707634	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695261	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.51	chr18	+	5781	11	NIC	ENSMUSG00000037236.17	novel	2638	13	NA	NA	0	-13	intron_retention	FALSE	canonical	3	171	junction_1	337.939180918697	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695263	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.52	chr18	+	3962	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	53	2247	0	169	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGACTTCTTGTTCTTGTT	NA	False	NA	8	True	ACTAAA	-19	NA	35695263	35724641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.54	chr18	+	5090	12	ISM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-7	-825	1	-13	intron_retention	FALSE	canonical	3	171	junction_1	253.72999249381	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695264	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683
ES.16360.56	chr18	+	2747	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-5	-888	-3	50	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695266	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.57	chr18	+	5657	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-2	625	intron_retention	FALSE	canonical	3	826	junction_2	197.032763068029	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGGTGGCATATATCT	NA	False	NA	NA	False	AATAAA	-15	NA	35695267	35725097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.59	chr18	+	4639	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-2	54	intron_retention	FALSE	canonical	3	826	junction_2	189.454339474086	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695267	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.6	chr18	+	3992	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	1	3765	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	426.688236551083	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35686461	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690445_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.60	chr18	+	2642	14	NIC	ENSMUSG00000037236.17	novel	1888	14	NA	NA	-2	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	422.607991870598	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695267	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712364_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.63	chr18	+	3934	14	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-2	167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	341.004537615786	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGACTTCTTGTTCTTG	NA	False	NA	6	True	ACTAAA	-17	NA	35695267	35724639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710693_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.64	chr18	+	2692	14	NNC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	402.834469065714	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695267	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35710610_35710673_35711476_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.65	chr18	+	5086	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	-2	54	intron_retention	FALSE	canonical	3	826	junction_2	197.032763068029	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695267	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.66	chr18	+	3008	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-1	-1153	1	315	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGTCTTGTCGCTGCTTC	NA	False	NA	5	True	ATTAAA	-15	NA	35695270	35724787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.67	chr18	+	4585	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	60	1617	1	799	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTGATAGTTTATGT	NA	False	NA	NA	False	TATAAA	-20	NA	35695270	35725271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.68	chr18	+	4414	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	0	67	intron_retention	FALSE	canonical	3	826	junction_2	197.032763068029	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTACTTTTCAT	NA	False	NA	8	True	AATAAA	-16	NA	35695271	35723858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.69	chr18	+	3893	16	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	461.292242871407	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695272	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35696512_35696631_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712376_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.7	chr18	+	2976	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	1	3698	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	471.977830691612	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35686461	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35692395_35692562_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.70	chr18	+	3768	13	NIC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	1	47	intron_retention	FALSE	canonical	3	171	junction_1	307.789114311876	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAATATTTGTCCGTTG	NA	False	NA	3	True	NA	NA	NA	35695272	35724519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.71	chr18	+	6884	12	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	1	6	intron_retention	FALSE	canonical	3	826	junction_2	205.156018033927	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCATGTTGATTGGTTG	NA	False	NA	38	True	AATAAA	-14	NA	35695272	35724478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.72	chr18	+	3967	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	1	68	intron_retention	FALSE	canonical	3	826	junction_2	189.454339474086	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	NA	False	NA	9	True	AATAAA	-17	NA	35695272	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.73	chr18	+	5194	13	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	1	167	intron_retention	FALSE	canonical	3	826	junction_2	197.032763068029	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGACTTCTTGTTCTTG	NA	False	NA	6	True	ACTAAA	-17	NA	35695272	35724639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.74	chr18	+	2427	14	NNC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	403.062991538455	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTAGGT	NA	False	NA	23	True	NA	NA	NA	35695273	35724463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717681_35720683_35720907_35721384_35721507_35723432
ES.16360.75	chr18	+	3503	13	NIC	ENSMUSG00000037236.17	novel	1846	14	NA	NA	2	50	intron_retention	FALSE	canonical	3	44	junction_1	338.399039186317	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695273	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.76	chr18	+	2601	13	NIC	ENSMUSG00000037236.17	novel	1846	14	NA	NA	3	-13	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	435.340950354496	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695274	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695313_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.78	chr18	+	2571	12	ISM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	64	8780	3	4329	5prime_fragment	FALSE	canonical	3	826	junction_2	93.9974502907234	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAATTTTTTTTTAGAT	NA	False	NA	NA	False	AATAAA	-26	NA	35695274	35718108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567
ES.16360.79	chr18	+	2651	13	NIC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	2	22	junction_2	414.714125097706	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695274	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.8	chr18	+	4476	1	FSM	ENSMUSG00000117869.2	ENSMUST00000235956.2	1355	1	-1	-3120	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATTTCATTGGC	NA	False	NA	NA	False	NA	NA	NA	35686461	35690937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35686500_35690900
ES.16360.80	chr18	+	11551	11	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	4	54	intron_retention	FALSE	canonical	3	846	junction_1	199.493458539372	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCGTTGTGGCTTT	NA	False	NA	10	True	NA	NA	NA	35695275	35724526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.81	chr18	+	2680	14	NNC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	425.453701442361	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695275	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712063_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720903_35721384_35721507_35723432
ES.16360.82	chr18	+	2986	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	66	3210	5	4	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCGAGTGACAACAGACAA	NA	False	NA	NA	False	AAAAAG	-39	NA	35695276	35723678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.83	chr18	+	3126	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	5	69	combination_of_known_splicesites	FALSE	canonical	2	22	junction_3	336.144235032467	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTACTTTTCATCT	NA	False	NA	10	True	AATAAA	-18	NA	35695276	35723860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.84	chr18	+	4583	13	NIC	ENSMUSG00000037236.17	novel	1888	14	NA	NA	10	50	intron_retention	FALSE	canonical	3	171	junction_1	308.723806806163	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35695281	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.85	chr18	+	1363	4	Fusion	ENSMUSG00000037058.17_ENSMUSG00000037236.17	novel	854	2	NA	NA	10	0	multi-exon	FALSE	canonical	0	0	junction_1	1390.43614260658	1756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	NA	False	NA	22	True	AATAAA	-16	NA	35695281	35750239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_35695313_35743923_35744088_35746375_35746556_35749251
ES.16360.86	chr18	+	3752	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	10	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	326.738146420847	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695281	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714981_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.88	chr18	+	2679	14	NNC	ENSMUSG00000037236.17	novel	1854	14	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_12	349.001398752728	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695282	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721390_35721507_35723432
ES.16360.9	chr18	+	3966	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	1	3761	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	1194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTGTCCGTTGTGG	NA	False	NA	6	True	NA	NA	NA	35686461	35724522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.90	chr18	+	4078	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	12	315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	325.358013171174	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGTCTTGTCGCTGCTTC	NA	False	NA	5	True	ATTAAA	-15	NA	35695283	35724787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723442
ES.16360.91	chr18	+	4088	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	12	311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	328.805545474364	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCGTCTTGTCGCTG	NA	False	NA	1	True	ATTAAA	-11	NA	35695283	35724783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712376_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.92	chr18	+	4886	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	12	317	intron_retention	FALSE	canonical	3	826	junction_2	189.454339474086	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTTGTCGCTGCTTCAA	NA	False	NA	7	True	ATTAAA	-17	NA	35695283	35724789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.93	chr18	+	3187	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	13	105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	325.358013171174	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGCCTTGCAGACT	NA	False	NA	46	True	NA	NA	NA	35695284	35723896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721498_35723432
ES.16360.95	chr18	+	3752	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	16	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	276.85883826696	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695287	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720909_35721390_35721507_35723432
ES.16360.96	chr18	+	3030	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	16	68	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	337.915906348478	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTACTTTTCATC	NA	False	NA	9	True	AATAAA	-17	NA	35695287	35723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.97	chr18	+	2627	13	NIC	ENSMUSG00000037236.17	novel	1888	14	NA	NA	16	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	419.362702667856	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	False	NA	36	True	AATAAA	-12	NA	35695287	35724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16360.98	chr18	+	3734	15	NNC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	16	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	326.738146420847	1141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAACTT	NA	False	NA	19	True	NA	NA	NA	35695287	35724459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714760_35714977_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ES.16361.1	chr18	+	194	1	Intergenic	novelGene_13672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAGAACCTTGAA	638	False	NA	NA	False	NA	NA	NA	35890324	35890518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35890300_35890500
ES.16362.1	chr18	+	206	1	Intergenic	novelGene_13673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATCCGCACTCAAGAG	1414	False	NA	NA	False	NA	NA	NA	35891100	35891306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35891100_35891300
ES.16363.1	chr18	+	175	1	Intergenic	novelGene_13674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAACAAAACAAAACAC	2233	False	NA	NA	False	NA	NA	NA	35891919	35892094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35891900_35892100
ES.16364.1	chr18	-	2426	15	NNC	ENSMUSG00000118030.2	novel	363	2	NA	NA	7483	27929	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACAAGCTTTAGCAACC	NA	False	NA	NA	False	NA	NA	NA	35724143	35689642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35689741_35690385_35690417_35710604_35710673_35711468_35711510_35711954_35712069_35712316_35712371_35714221_35714347_35714647_35714771_35714966_35715137_35715765_35715900_35716929_35716974_35717566_35717935_35720683_35720906_35721383_35721505_35723430
ES.16364.2	chr18	-	3025	1	Intergenic	novelGene_13659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAATACTCTCTTCTAT	7973	False	NA	NA	False	NA	NA	NA	35700445	35697420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35697400_35700400
ES.16364.3	chr18	-	3344	13	NNC	ENSMUSG00000118030.2	novel	363	2	NA	NA	7483	12677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAAAATAAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	35724143	35704894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35705987_35710608_35710672_35711954_35712067_35712316_35712371_35714221_35714347_35714647_35714771_35714966_35715137_35715765_35715900_35716929_35716979_35717568_35717935_35720683_35720906_35721383_35721505_35723430
ES.16364.4	chr18	-	3308	14	NNC	ENSMUSG00000118030.2	novel	363	2	NA	NA	7427	12543	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTAAAAGATGGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	35724199	35705028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35705987_35710608_35710673_35711468_35711510_35711954_35712069_35712316_35712371_35714221_35714347_35714647_35714771_35714966_35715137_35715765_35715900_35716929_35716974_35717566_35717933_35720680_35720906_35721383_35721505_35723430
ES.16365.1	chr18	-	314	1	Antisense	novelGene_ENSMUSG00000037236.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAACAATTATTTTA	NA	False	NA	NA	False	ACTAAA	-44	NA	35726292	35725978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_35726000_35726300
ES.16366.1	chr18	-	167	1	Intergenic	novelGene_13660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	35728811	35728644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35728600_35728800
ES.16366.10	chr18	-	248	1	Intergenic	novelGene_13663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGGCTTGGGTGGACA	NA	False	NA	NA	False	NA	NA	NA	35772908	35772660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35772700_35772900
ES.16366.11	chr18	-	212	1	Intergenic	novelGene_13665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGGGAGGGAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	35777271	35777059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35777100_35777300
ES.16366.12	chr18	-	178	1	Intergenic	novelGene_13667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	35779687	35779509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35779500_35779700
ES.16366.13	chr18	-	1078	7	FSM	ENSMUSG00000117874.2	ENSMUST00000235292.2	1115	7	37	0	37	0	multi-exon	FALSE	canonical	0	0	junction_3	96.3098298894424	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTGTTGGCTGTTGA	NA	False	NA	-2	True	AATAAA	-15	NA	35795179	35780320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ES.16366.14	chr18	-	900	4	FSM	ENSMUSG00000024353.6	ENSMUST00000025211.6	904	4	-1	5	-1	-5	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGAGTAGTGTTGGCTG	NA	False	NA	-6	True	AATAAA	-11	NA	35782421	35780324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35780780_35780876_35780988_35781311_35781437_35782212
ES.16366.15	chr18	-	4866	1	FSM	ENSMUSG00000073600.6	ENSMUST00000190196.5	4888	1	19	3	19	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAAGTGTGTAGTCCTA	NA	False	NA	NA	False	AATAAA	-36	NA	35788272	35783406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35783400_35788300
ES.16366.16	chr18	-	1927	1	FSM	ENSMUSG00000073600.6	ENSMUST00000097619.2	3021	1	1331	-237	1331	237	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTCCCAGGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	35786909	35784982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35785000_35786900
ES.16366.17	chr18	-	684	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	17	1	-13	-1	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAATGCCCAACCTCT	NA	False	NA	-8	True	AATAAA	-25	NA	35795222	35789742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ES.16366.19	chr18	-	652	6	NIC	ENSMUSG00000024352.13	novel	702	6	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	3	junction_3	72.8093400601873	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTAATGCCCAACCTC	NA	False	NA	-9	True	AATAAA	-24	NA	35795200	35789743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35789898_35790001_35790105_35793335_35793398_35793496_35793628_35793844_35793911_35795064
ES.16366.2	chr18	-	180	2	Intergenic	novelGene_13661	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	680	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	35897491	35728644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35728678_35897344
ES.16366.20	chr18	-	2068	4	ISM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	1	4	1	0	intron_retention	FALSE	canonical	3	154	junction_2	16.0831174424198	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTAATGCCCAACC	NA	False	NA	-11	True	AATAAA	-22	NA	35795238	35789745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496
ES.16366.21	chr18	-	1801	5	ISM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	50	5	-5	-1	intron_retention	FALSE	canonical	3	154	junction_2	14.7203091000155	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTGTAATGCCCAAC	NA	False	NA	-12	True	AATAAA	-21	NA	35795189	35789746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844
ES.16366.22	chr18	-	794	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	40	-124	10	124	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTCGGGTTCGAGACT	NA	False	NA	NA	False	NA	NA	NA	35795199	35792944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
ES.16366.23	chr18	-	1923	2	NIC	ENSMUSG00000024352.13	novel	713	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	181	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGTTTTATCCCATT	NA	False	NA	-2	True	NA	NA	NA	35795209	35793069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35793628_35793844
ES.16366.24	chr18	-	651	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	40	19	10	-18	multi-exon	FALSE	canonical	3	181	junction_2	13.2748718344933	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACCTTCTTAGTCCAC	NA	False	NA	-20	True	NA	NA	NA	35795199	35793087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
ES.16366.25	chr18	-	5253	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836187	35804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
ES.16366.26	chr18	-	5336	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	26.5329983228432	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836180	35804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835649_35836078
ES.16366.27	chr18	-	5159	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-13	0	-13	0	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836187	35804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ES.16366.28	chr18	-	3678	10	NNC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5282122400966	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836148	35804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35806133_35807668_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
ES.16366.29	chr18	-	3578	9	NNC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9944655076957	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836142	35804155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35806133_35807668_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ES.16366.3	chr18	-	3959	15	NNC	ENSMUSG00000024354.14	novel	3026	15	NA	NA	-2572	0	intron_retention	FALSE	canonical	0	0	junction_8	2.09469689980217	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTCTGTGTTATGGA	NA	False	NA	NA	False	ATTAAA	-29	NA	35762869	35747656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35760217_35760630_35760694_35762743
ES.16366.30	chr18	-	3430	9	NIC	ENSMUSG00000024350.7	novel	5146	8	NA	NA	30	-1780	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	22.8250821466211	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGCCCTGTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	35836144	35805935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35835464_35835559_35836078
ES.16366.31	chr18	-	3332	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	32	1782	32	-1782	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCCGGCCCTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	35836142	35805937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ES.16366.32	chr18	-	1235	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	-13	3924	-13	4	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTACTCTCTGCTGACTT	NA	False	NA	-6	True	AATACA	-18	NA	35836187	35808079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ES.16366.33	chr18	-	257	1	Intergenic	novelGene_13668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACTTGGTTCTCTCCTT	8331	False	NA	NA	False	NA	NA	NA	35821800	35821543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35821500_35821800
ES.16366.34	chr18	-	194	1	Intergenic	novelGene_13670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTTCAACCCATCAGA	1645	False	NA	NA	False	NA	NA	NA	35828486	35828292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35828300_35828500
ES.16366.35	chr18	-	943	8	NIC	ENSMUSG00000073599.11	novel	1076	10	NA	NA	274	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	2.67261241912424	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAATTTCTTTTAAGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	35850666	35846140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35846488_35846693_35846791_35848231_35848269_35848475_35848575_35849005_35849129_35849805_35849866_35850205_35850344_35850624
ES.16366.36	chr18	-	179	1	Intergenic	novelGene_13671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	35865282	35865103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35865100_35865300
ES.16366.37	chr18	-	2199	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	95	5	3	-5	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAACTGCCTTGGCCTAGT	NA	False	NA	NA	False	NA	NA	NA	35873512	35866738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
ES.16366.38	chr18	-	1877	8	NNC	ENSMUSG00000024349.11	novel	2299	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.61143211187685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAGAATGGCCTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	35873511	35867086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871870_35872092_35872274_35872403_35872631_35872977_35873068_35873359
ES.16366.39	chr18	-	207	1	Intergenic	novelGene_13675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATATGAAGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	35897493	35897286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35897300_35897500
ES.16366.4	chr18	-	4234	12	NIC	ENSMUSG00000024354.14	novel	3026	15	NA	NA	-252	-2	intron_retention	FALSE	canonical	1	1	junction_7	2.10076727423479	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTTTCTGTGTTATG	NA	False	NA	NA	False	ATTAAA	-27	NA	35760549	35747658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35756018_35756503_35756652_35757123_35757281_35757480_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411
ES.16366.6	chr18	-	3120	17	NNC	ENSMUSG00000024354.14	novel	3026	15	NA	NA	-2646	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2.25	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAATTCTTGAATATG	NA	False	NA	NA	False	NA	NA	NA	35762943	35747744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35755695_35755911_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35759547_35760154_35760217_35760630_35760694_35762743
ES.16366.7	chr18	-	3714	14	NNC	ENSMUSG00000024354.14	novel	3026	15	NA	NA	-2579	-666	intron_retention	FALSE	canonical	0	0	junction_8	2.16753889286236	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTTAGATAAGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	35762876	35748322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35760694_35762743
ES.16366.8	chr18	-	1613	6	NNC	ENSMUSG00000024350.7	novel	582	4	NA	NA	24	38291	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2188595357997	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	35836150	35765864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35765872_35821634_35822742_35830030_35830177_35833856_35834044_35835464_35835559_35836078
ES.16366.9	chr18	-	244	1	Intergenic	novelGene_13662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	35766810	35766566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35766600_35766800
ES.16367.1	chr18	+	1912	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-164	732	-164	616	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTGAATAGGCTTT	NA	False	NA	NA	False	AATAAA	-26	NA	35904446	35939489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.10	chr18	+	1802	7	NNC	ENSMUSG00000091896.9	novel	2480	7	NA	NA	-110	615	intron_retention	FALSE	canonical	1	1	junction_3	392.20760517302	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTGAATAGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	35904500	35939488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35905066_35926517_35926582_35932893_35932926_35933059_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.12	chr18	+	1454	8	NIC	ENSMUSG00000091896.9	novel	2393	8	NA	NA	-35	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	366.191485539509	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	35904575	35942546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570_35938875_35942260
ES.16367.13	chr18	+	2336	8	Fusion	ENSMUSG00000046668.10_ENSMUSG00000091896.9	novel	2393	8	NA	NA	4	-550	multi-exon	FALSE	canonical	1	2	junction_6	451.364416779495	878	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGTTTTAACTCCACT	NA	False	NA	NA	False	NA	NA	NA	35904614	35994191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934368_35934421_35991445_35992510_35993702
ES.16367.14	chr18	+	1699	7	NIC	ENSMUSG00000091896.9	novel	2480	7	NA	NA	6	615	intron_retention	FALSE	canonical	2	10	junction_5	385.831857448581	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTGAATAGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	35904616	35939488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934368_35934421_35938570
ES.16367.15	chr18	+	2612	5	NIC	ENSMUSG00000091896.9	novel	884	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	837	junction_2	89.8731745294445	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTTCACCTGTCTCA	NA	False	NA	10	True	AATAAA	-21	NA	35904630	35940214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35905066_35926517_35926582_35932893_35933269_35934326_35934421_35938570
ES.16367.16	chr18	+	3517	6	NIC	ENSMUSG00000091896.9	novel	2480	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	837	junction_2	133.37106132891	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTCTCATCTCTCA	NA	False	NA	17	True	AATAAA	-28	NA	35904631	35940221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35934421_35938570
ES.16367.17	chr18	+	4942	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	38	-2500	-6	174	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTGCCTTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	35904648	35942721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.18	chr18	+	4220	1	NIC	ENSMUSG00000091896.9	novel	2480	7	NA	NA	12	-25504	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTACATATTATAAATAA	NA	False	NA	NA	False	NA	NA	NA	35904666	35908886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35904700_35908900
ES.16367.19	chr18	+	1478	6	NIC	ENSMUSG00000091896.9	novel	2480	7	NA	NA	-41	615	intron_retention	FALSE	canonical	1	7	junction_4	379.578924599351	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTGAATAGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	35904773	35939488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35934326_35934421_35938570
ES.16367.2	chr18	+	1101	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-163	1542	-163	10	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATTTCCATTTGACT	NA	False	NA	1	True	AATAAA	-30	NA	35904447	35938679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.20	chr18	+	2757	8	Fusion	ENSMUSG00000046668.10_ENSMUSG00000091896.9	novel	2393	8	NA	NA	-25	4	multi-exon	FALSE	canonical	1	2	junction_6	394.875904040544	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGCTTCTTGCTCTT	NA	False	NA	38	True	AATAAA	-29	NA	35904789	35994745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35991445_35992510_35993702
ES.16367.21	chr18	+	5263	1	Genic_Genomic	ENSMUSG00000091896.9	novel	NA	NA	NA	NA	3102	177	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCCTTAAAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	35937461	35942724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_35937500_35942700
ES.16367.22	chr18	+	3418	2	FSM	ENSMUSG00000046668.10	ENSMUST00000235161.2	651	2	-81	-2686	-81	0	multi-exon	FALSE	canonical	2	15	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962368	35994741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35962491_35991445
ES.16367.23	chr18	+	2675	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-116	4	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGCTTCTTGCTCTT	NA	False	NA	38	True	AATAAA	-29	NA	35962724	35994745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35963293_35991445_35992510_35993702
ES.16367.24	chr18	+	3825	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-177	-2479	-72	5	multi-exon	FALSE	canonical	3	389	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35962768	35994746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963293_35991445
ES.16367.25	chr18	+	3912	3	NNC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-52	1	intron_retention	FALSE	canonical	0	0	junction_1	0	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	35	True	AATAAA	-26	NA	35962788	35994742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35968590_35968702_35991445
ES.16367.26	chr18	+	3544	2	ISM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	-47	-2	-47	2	intron_retention	FALSE	canonical	3	48	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTGGCTTCTTGCTC	NA	False	NA	36	True	AATAAA	-27	NA	35962793	35994743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_35963040_35991445
ES.16367.27	chr18	+	3756	3	NNC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-46	4	intron_retention	FALSE	non_canonical	0	0	junction_1	194.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGCTTCTTGCTCTT	NA	False	NA	38	True	AATAAA	-29	NA	35962794	35994745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963075_35963116_35963293_35991445
ES.16367.28	chr18	+	1794	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-35	-796	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35962805	35993945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35963293_35991445_35992510_35993702
ES.16367.29	chr18	+	2236	3	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACACTCCTGGCTTCT	NA	False	NA	31	True	AATAAA	-22	NA	35962805	35994738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963040_35991445_35991479_35992769
ES.16367.3	chr18	+	2305	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-163	338	-163	-331	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAGCACAATCTTGT	NA	False	NA	NA	False	CATAAA	-22	NA	35904447	35939883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.30	chr18	+	2795	3	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	190.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962808	35994741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35991445_35992718_35993702
ES.16367.31	chr18	+	3230	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-137	-1924	-32	-550	multi-exon	FALSE	canonical	3	389	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGTTTTAACTCCACT	NA	False	NA	NA	False	NA	NA	NA	35962808	35994191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963293_35991445
ES.16367.32	chr18	+	3009	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	-137	-1703	-32	-771	multi-exon	FALSE	canonical	3	389	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGCTTTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	35962808	35993970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963293_35991445
ES.16367.33	chr18	+	2337	3	FSM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	-31	-4	-31	4	multi-exon	FALSE	canonical	3	48	junction_1	140.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGCTTCTTGCTCTT	NA	False	NA	38	True	AATAAA	-29	NA	35962809	35994745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963040_35991445_35992510_35993702
ES.16367.34	chr18	+	2990	3	NNC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-29	1	intron_retention	FALSE	non_canonical	0	0	junction_2	194.5	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	35	True	AATAAA	-26	NA	35962811	35994742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35991445_35991559_35992346
ES.16367.36	chr18	+	4013	4	NNC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACACTCCTGGCTTCT	NA	False	NA	31	True	AATAAA	-22	NA	35962828	35994738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35968590_35968702_35973585_35973731_35991445
ES.16367.37	chr18	+	2412	4	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.092087340249	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35962840	35994740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963040_35968590_35968702_35991445_35992510_35993702
ES.16367.38	chr18	+	2663	4	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.092087340249	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35962842	35994740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35968590_35968702_35991445_35992510_35993702
ES.16367.39	chr18	+	5622	2	FSM	ENSMUSG00000046668.10_ENSMUSG00000117840.2	ENSMUST00000237291.2	1169	2	-102	-4351	3	1877	multi-exon	FALSE	canonical	3	389	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGGTGGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	35962843	35996618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963293_35991445
ES.16367.4	chr18	+	2644	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-162	-2	-162	2	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTCTCATCTCTCAGT	NA	False	NA	19	True	AATAAA	-30	NA	35904448	35940223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.40	chr18	+	3491	3	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-47	0	intron_retention	FALSE	non_canonical	0	0	junction_1	194.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962898	35994741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35962922_35963120_35963293_35991445
ES.16367.41	chr18	+	2607	4	NNC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.092087340249	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35962900	35994740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35985180_35985294_35991445_35992510_35993702
ES.16367.42	chr18	+	3682	3	NNC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	107	1	intron_retention	FALSE	canonical	0	0	junction_1	0	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	35	True	AATAAA	-26	NA	35963052	35994742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963293_35973585_35973731_35991445
ES.16367.43	chr18	+	1698	3	NIC	ENSMUSG00000046668.10	novel	1169	2	NA	NA	205	-547	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTTAACTCCACTCTC	NA	False	NA	NA	False	NA	NA	NA	35963150	35994194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35963293_35991445_35992510_35993702
ES.16367.45	chr18	+	833	2	Fusion	ENSMUSG00000046668.10_ENSMUSG00000117840.2	novel	1169	2	NA	NA	-182	-10	multi-exon	FALSE	canonical	1	1	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAGAGACCCATAGTCC	NA	False	NA	NA	False	NA	NA	NA	35963184	36010354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_35963293_36009629
ES.16367.46	chr18	+	2233	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	-45	-1	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTCCTGGCTTCTTG	NA	False	NA	33	True	AATAAA	-24	NA	35963321	35994740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35963453_35991445_35992510_35993702
ES.16367.47	chr18	+	3384	2	FSM	ENSMUSG00000046668.10	ENSMUST00000235169.2	857	2	3	-2530	3	5	multi-exon	FALSE	canonical	3	58	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTTCTTGCTCTTG	NA	False	NA	39	True	AATAAA	-30	NA	35963369	35994746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35963453_35991445
ES.16367.48	chr18	+	1410	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	8	-771	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGCTTTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	35963374	35993970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35963453_35991445_35992510_35993702
ES.16367.49	chr18	+	2270	4	NNC	ENSMUSG00000046668.10	novel	857	2	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.092087340249	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	35	True	AATAAA	-26	NA	35963397	35994742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35963453_35968590_35968702_35991445_35992510_35993702
ES.16367.5	chr18	+	2194	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-162	448	-162	-441	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGTGACAGTCTCT	NA	False	NA	21	True	AATAAA	-36	NA	35904448	35939773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.50	chr18	+	157	1	Intergenic	novelGene_13682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35985676	35985833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_35985700_35985800
ES.16367.51	chr18	+	6350	1	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	598	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACACTCCTGGCTTCT	NA	False	NA	31	True	AATAAA	-22	NA	35988388	35994738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35988400_35994700
ES.16367.52	chr18	+	4290	1	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	1780	-881	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTCTCTCACAGAT	NA	False	NA	NA	False	NA	NA	NA	35989570	35993860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_35989600_35993900
ES.16367.53	chr18	+	3071	1	NIC	ENSMUSG00000117840.2	novel	835	2	NA	NA	11987	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCATAGTCCAGATTCC	7944	False	NA	NA	False	NA	NA	NA	36007290	36010361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36007300_36010400
ES.16367.6	chr18	+	3133	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	-161	-492	-161	492	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGGCTGGGAAATACAG	NA	False	NA	NA	False	AATAAA	-26	NA	35904449	35940713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16367.7	chr18	+	1988	6	FSM	ENSMUSG00000091896.9	ENSMUST00000235516.2	884	6	-365	-739	-161	615	multi-exon	FALSE	canonical	3	837	junction_2	80.5729483139347	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTGAATAGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	35904449	35939488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933269_35934326_35934421_35938570
ES.16367.8	chr18	+	4278	7	Fusion	ENSMUSG00000046668.10_ENSMUSG00000091896.9	novel	2480	7	NA	NA	-152	1	intron_retention	FALSE	canonical	1	2	junction_6	384.176355626192	880	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCCTGGCTTCTTGCT	NA	False	NA	35	True	AATAAA	-26	NA	35904458	35994742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35991445
ES.16367.9	chr18	+	1544	8	NNC	ENSMUSG00000091896.9	novel	2393	8	NA	NA	-149	615	intron_retention	FALSE	non_canonical	0	0	junction_1	366.191485539509	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTGAATAGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	35904461	35939488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_35904667_35905018_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ES.16368.1	chr18	-	169	1	Intergenic	novelGene_13676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTACTAC	3838	False	NA	NA	False	NA	NA	NA	35906574	35906405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35906400_35906600
ES.16369.1	chr18	-	1451	1	Intergenic	novelGene_13677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTATAGCTGTCTCCA	8212	False	NA	NA	False	NA	NA	NA	35929995	35928544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35928500_35930000
ES.16369.2	chr18	-	179	1	Intergenic	novelGene_13678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAACATTTTTTTTAG	8959	False	NA	NA	False	NA	NA	NA	35929248	35929069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35929100_35929200
ES.1637.1	chr1	-	211	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACTCAACATGGAAGCAA	NA	False	NA	NA	False	AAAAAG	-9	NA	155000822	155000611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155000600_155000800
ES.16370.1	chr18	-	168	1	Antisense	novelGene_ENSMUSG00000091896.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGGCAGCCCCCCATA	2931	False	NA	NA	False	NA	NA	NA	35935276	35935108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_35935100_35935300
ES.16371.1	chr18	-	177	1	Intergenic	novelGene_13679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACTAGAT	NA	False	NA	NA	False	NA	NA	NA	35943588	35943411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35943400_35943600
ES.16372.1	chr18	-	186	1	Intergenic	novelGene_13680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGTGCCACTAGACTCA	NA	False	NA	0	True	NA	NA	NA	35955671	35955485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35955500_35955700
ES.16373.1	chr18	-	2490	3	NNC	ENSMUSG00000100320.2	novel	571	2	NA	NA	1	2122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTCTTCTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	35964145	35961319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_35963617_35963750_35963841_35964042
ES.16373.3	chr18	-	1471	2	FSM	ENSMUSG00000100320.2	ENSMUST00000188160.2	571	2	14	-914	14	914	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTGTAGGAGATGCC	NA	False	NA	NA	False	AATAAA	-10	NA	35964132	35962527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_35963617_35963750
ES.16373.4	chr18	-	2427	1	Genic_Genomic	ENSMUSG00000100320.2	novel	NA	NA	NA	NA	-2282	-560	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAACTTGATCAGCCCG	NA	False	NA	NA	False	NA	NA	NA	35966428	35964001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_35964000_35966400
ES.16373.5	chr18	-	1023	1	Intergenic	novelGene_13681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	35966427	35965404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_35965400_35966400
ES.16374.1	chr18	-	928	1	Intergenic	novelGene_13683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTTGTTCTAGCCTAG	NA	False	NA	NA	False	CATAAA	-22	NA	36006980	36006052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36006100_36007000
ES.16375.1	chr18	+	172	1	Intergenic	novelGene_13684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGATTGATTG	2790	False	NA	NA	False	NA	NA	NA	36016112	36016284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36016100_36016300
ES.16376.1	chr18	+	215	1	Intergenic	novelGene_13685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGACCCTATCCATCAG	NA	False	NA	NA	False	NA	NA	NA	36032991	36033206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36033000_36033200
ES.16377.1	chr18	+	215	1	Intergenic	novelGene_13686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTCTGGGATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	36037688	36037903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36037700_36037900
ES.16378.1	chr18	+	160	1	Intergenic	novelGene_13687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAATTTTTCA	NA	False	NA	NA	False	NA	NA	NA	36038332	36038492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36038300_36038500
ES.16379.1	chr18	+	176	2	Intergenic	novelGene_13688	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36044993	36068824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36045010_36068664
ES.16379.2	chr18	+	179	1	Intergenic	novelGene_13689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGTAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	36047808	36047987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36047800_36048000
ES.16379.3	chr18	+	205	1	Intergenic	novelGene_13691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGAGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	36068647	36068852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36068600_36068900
ES.16379.4	chr18	+	370	1	Intergenic	novelGene_13692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGAGATGTGAT	NA	False	NA	NA	False	NA	NA	NA	36068648	36069018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36068600_36069000
ES.1638.1	chr1	+	2289	8	NNC	ENSMUSG00000026470.15	novel	870	5	NA	NA	-119	1271	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	67.4981481227448	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGTATTTTATCT	NA	False	NA	8	True	AATAAA	-18	NA	155034341	155079264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155034396_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.10	chr1	+	1297	8	NNC	ENSMUSG00000026470.15	novel	4589	8	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	70.5112525395336	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGATGAGATTGGT	NA	False	NA	NA	False	TATAAA	-13	NA	155034474	155081399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155080957
ES.1638.11	chr1	+	4217	1	Genic_Genomic	ENSMUSG00000026470.15	novel	NA	NA	NA	NA	6426	4	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGGTCTGCTGTGTA	NA	False	NA	NA	False	TATAAA	-23	NA	155077192	155081409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_155077200_155081400
ES.1638.2	chr1	+	2495	8	NNC	ENSMUSG00000026470.15	novel	4589	8	NA	NA	-49	1271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.4838110641608	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGTATTTTATCT	NA	False	NA	8	True	AATAAA	-18	NA	155034411	155079264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155034674_155049731_155049906_155053605_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.3	chr1	+	2797	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-46	1838	-46	1574	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAATGTGGGCCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	155034414	155079567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.4	chr1	+	2488	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-36	2137	-36	1275	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTATTTTATCTTGTT	NA	False	NA	12	True	AATAAA	-22	NA	155034424	155079268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.5	chr1	+	4595	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-19	13	-19	-13	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTTTAAAGAAAGGATGA	NA	False	NA	NA	False	TATAAA	-6	NA	155034441	155081392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.6	chr1	+	1573	8	NNC	ENSMUSG00000026470.15	novel	4589	8	NA	NA	-17	454	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	66.514997541601	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTGTGTCGGTCTAGC	NA	False	NA	21	True	AATAAA	-21	NA	155034443	155078447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155034599_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.7	chr1	+	1639	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-8	2958	-8	454	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTGTGTCGGTCTAGC	NA	False	NA	21	True	AATAAA	-21	NA	155034452	155078447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.1638.8	chr1	+	705	3	FSM	ENSMUSG00000026470.15	ENSMUST00000191769.2	405	3	-91	-209	-7	209	multi-exon	FALSE	canonical	3	217	junction_2	7	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCTGATCTACTTGCC	NA	False	NA	NA	False	AATAAA	-23	NA	155034453	155053914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599
ES.1638.9	chr1	+	1476	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	-2	3115	-2	297	multi-exon	FALSE	canonical	3	152	junction_7	29.3257565972304	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCAGTGTCTCATTTTG	NA	False	NA	NA	False	NA	NA	NA	155034458	155078290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ES.16380.1	chr18	-	186	1	Intergenic	novelGene_13690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAAGCATT	9228	False	NA	NA	False	NA	NA	NA	36059388	36059202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36059200_36059400
ES.16381.1	chr18	-	178	1	Intergenic	novelGene_13693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATAAAAAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	36082915	36082737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36082700_36082900
ES.16382.1	chr18	-	93	1	Intergenic	novelGene_13694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	36084601	36084508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36084500_36084600
ES.16383.1	chr18	-	181	1	Intergenic	novelGene_13695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGGCTTGACTCTG	NA	False	NA	NA	False	NA	NA	NA	36084829	36084648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36084600_36084800
ES.16384.1	chr18	+	4614	16	NNC	ENSMUSG00000024347.17	novel	674	6	NA	NA	-5736	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.928559218478941	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTTTCCTGCATTC	NA	False	NA	NA	False	NA	NA	NA	36092146	36147766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36092341_36092471_36092674_36111336_36111739_36112668_36113119_36113341_36113537_36117395_36117477_36120240_36120354_36121232_36121292_36135976_36136067_36137759_36137804_36138771_36138963_36139129_36139201_36139613_36139772_36140533_36140679_36143657_36143802_36145691
ES.16385.1	chr18	+	959	4	NNC	ENSMUSG00000117852.2	novel	788	3	NA	NA	-53170	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAATAA	NA	False	NA	NA	False	NA	NA	NA	36185533	36242976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36185613_36185790_36186023_36239094_36239206_36242439
ES.16385.2	chr18	+	1307	3	Antisense	novelGene_ENSMUSG00000060275.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGTGTTTCTCAAA	6891	False	NA	NA	False	NA	NA	NA	36202569	36209273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_36202685_36206963_36207142_36208259
ES.16386.1	chr18	+	181	1	Intergenic	novelGene_13696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	36270790	36270971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36270800_36271000
ES.16387.1	chr18	-	3934	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	9	-887	9	887	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGTTTGACTGTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	36330424	36149817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16387.2	chr18	-	3079	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	-8	-15	-8	15	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATTTTTTGACTCTTTA	NA	False	NA	NA	False	NA	NA	NA	36330441	36150689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16387.3	chr18	-	2888	9	NIC	ENSMUSG00000060275.15	novel	3056	10	NA	NA	4	-27	intron_retention	FALSE	canonical	0	0	junction_7	2.17586189819115	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAACAACA	NA	False	NA	NA	False	NA	NA	NA	36330429	36150731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36164935_36164995_36171283_36171405_36185832_36186005_36329480
ES.16387.4	chr18	-	2338	9	NIC	ENSMUSG00000060275.15	novel	3056	10	NA	NA	377	-116	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	2.86956007081225	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGTCTTATAAT	NA	False	NA	NA	False	TATAAA	-41	NA	36329908	36150820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16387.5	chr18	-	2770	11	NNC	ENSMUSG00000060275.15	novel	3056	10	NA	NA	17	115	intron_retention	FALSE	non_canonical	0	0	junction_1	2.84429253066558	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAACAAAATGTTTTATT	NA	False	NA	NA	False	AATAAA	-31	NA	36330416	36150851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36151249_36151370_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16387.6	chr18	-	2893	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	10	153	10	109	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGTATAACAAAATGT	NA	False	NA	NA	False	AATAAA	-25	NA	36330423	36150857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16387.7	chr18	-	2188	10	NNC	ENSMUSG00000060275.15	novel	3056	10	NA	NA	302	103	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.98142396999972	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAGTATAACA	NA	False	NA	NA	False	AATAAA	-19	NA	36329983	36150863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36151595_36154228_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ES.16388.1	chr18	+	110	1	Intergenic	novelGene_13697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36339202	36339312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36339200_36339300
ES.16389.1	chr18	-	204	1	Intergenic	novelGene_13698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGGTTGGAAAGATGGAT	NA	False	NA	NA	False	NA	NA	NA	36374777	36374573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36374600_36374800
ES.1639.1	chr1	-	1608	1	FSM	ENSMUSG00000033722.10	ENSMUST00000185937.2	1511	1	-100	3	-100	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTGGATTCTGTCTT	9804	False	NA	NA	False	ATTAAA	-22	NA	155089827	155088219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155088200_155089800
ES.1639.2	chr1	-	1859	5	ISM	ENSMUSG00000033722.10	ENSMUST00000035914.5	3797	7	9413	1	1847	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	2.48746859276655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTGGATTCTGTCTT	558	False	NA	NA	False	ATTAAA	-22	NA	155099073	155088219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_155089460_155093127_155093313_155094005_155094134_155097080_155097334_155099020
ES.16390.1	chr18	-	255	1	Intergenic	novelGene_13699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTGTGCTGTAGTTC	NA	False	NA	NA	False	NA	NA	NA	36382879	36382624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36382600_36382900
ES.16391.1	chr18	+	222	1	Intergenic	novelGene_13700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	36382986	36383208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36383000_36383200
ES.16392.1	chr18	-	177	2	Intergenic	novelGene_13701	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTCTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	36396917	36392991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36392999_36396747
ES.16392.2	chr18	-	184	1	Intergenic	novelGene_13702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAACTAAGCACT	NA	False	NA	NA	False	NA	NA	NA	36396918	36396734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36396700_36396900
ES.16393.1	chr18	+	202	1	Intergenic	novelGene_13703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAACAACAACAAAA	6855	False	NA	NA	False	NA	NA	NA	36397779	36397981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36397800_36398000
ES.16394.1	chr18	-	203	1	Intergenic	novelGene_13704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCACAAACTAAGGGCCT	NA	False	NA	NA	False	NA	NA	NA	36401140	36400937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36400900_36401100
ES.16395.1	chr18	+	5603	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	-536	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACTCACTGTTTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	36413613	36425581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36413720_36420084
ES.16395.10	chr18	+	3644	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	259	2054	259	-2054	multi-exon	FALSE	canonical	3	21	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTCTCTTGTTTACTA	NA	False	NA	NA	False	NA	NA	NA	36414408	36423534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.11	chr18	+	2753	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	391	2813	391	-2813	multi-exon	FALSE	canonical	3	21	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTGAGTGAAGAGAAAA	NA	False	NA	21	True	ATTAAA	-17	NA	36414540	36422775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.12	chr18	+	1531	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5275	-4094	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATAAAGAACTGAG	NA	False	NA	NA	False	NA	NA	NA	36419424	36421494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36419546_36420084
ES.16395.13	chr18	+	2807	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5279	-2814	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTTTGAGTGAAGAGAAA	NA	False	NA	20	True	ATTAAA	-16	NA	36419428	36422774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36419546_36420084
ES.16395.14	chr18	+	5550	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5340	-10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTGTACTCACTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	36419489	36425578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36419546_36420084
ES.16395.15	chr18	+	5593	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5837	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTACTCACTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	36419986	36425579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36420000_36425600
ES.16395.16	chr18	+	3330	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5840	-2269	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGCATTTTTTATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	36419989	36423319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36420000_36423300
ES.16395.17	chr18	+	4367	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5842	-1230	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAATATTGATGTTTTT	NA	False	NA	11	True	AGTAAA	-19	NA	36419991	36424358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36420000_36424400
ES.16395.18	chr18	+	2778	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5846	-2815	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTTTGAGTGAAGAGAA	NA	False	NA	19	True	ATTAAA	-15	NA	36419995	36422773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36420000_36422800
ES.16395.2	chr18	+	2835	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-384	3506	-384	-3506	multi-exon	FALSE	canonical	3	21	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTTCCCATAATATTT	NA	False	NA	78	True	NA	NA	NA	36413765	36422082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.3	chr18	+	5094	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-366	1229	-366	-1229	multi-exon	FALSE	canonical	3	21	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATATTGATGTTTTTT	NA	False	NA	12	True	AGTAAA	-20	NA	36413783	36424359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.4	chr18	+	5736	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	-343	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTACTCACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	36413806	36425577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36414318_36420352
ES.16395.5	chr18	+	6037	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	-87	7	-87	-7	multi-exon	FALSE	canonical	3	21	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACTCACTGTTTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	36414062	36425581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.6	chr18	+	3251	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	1	2705	1	-2705	multi-exon	FALSE	canonical	3	21	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGATCTTGTATCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	36414150	36422883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.7	chr18	+	4047	2	NNC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	1	-1251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACTTGAAATG	NA	False	NA	-10	True	NA	NA	NA	36414150	36424337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36414249_36420388
ES.16395.8	chr18	+	3732	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	8	2217	8	-2217	multi-exon	FALSE	canonical	3	21	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTGACATTTGGAATG	NA	False	NA	NA	False	AGTAAA	-19	NA	36414157	36423371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16395.9	chr18	+	2036	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	8	3913	8	-3913	multi-exon	FALSE	canonical	3	21	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAACACGTAAAATAATAT	NA	False	NA	NA	False	AAAAAG	-9	NA	36414157	36421675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36414603_36420084
ES.16396.1	chr18	+	8825	1	FSM	ENSMUSG00000110185.3	ENSMUST00000210490.3	2839	1	-5981	-5	-5981	5	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTCTTTGTTTCAGTG	NA	False	NA	NA	False	AATAAA	-35	NA	36425750	36434575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36425800_36434600
ES.16396.2	chr18	+	3669	1	Intergenic	novelGene_13705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAACAAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	36426326	36429995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36426300_36430000
ES.16396.3	chr18	+	2741	1	FSM	ENSMUSG00000110185.3	ENSMUST00000210490.3	2839	1	-538	636	-538	-636	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATCTTCTCTAAAG	NA	False	NA	NA	False	AGTAAA	-19	NA	36431193	36433934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36431200_36433900
ES.16397.1	chr18	-	230	1	Intergenic	novelGene_13706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGTACCTCTTCACCT	NA	False	NA	NA	False	AATAAA	-10	NA	36466742	36466512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36466500_36466700
ES.16398.1	chr18	-	159	1	Intergenic	novelGene_13707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	36471792	36471633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36471600_36471800
ES.16399.1	chr18	+	872	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	-16	-25	-16	25	multi-exon	FALSE	canonical	3	759	junction_1	90	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCACCATGGGGCTGTGC	NA	False	NA	42	True	AATAAA	-42	NA	36481733	36536058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36481870_36499567_36499795_36535549
ES.16399.2	chr18	+	889	4	NNC	ENSMUSG00000046727.14	novel	1101	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	350.637831514069	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	NA	False	NA	16	True	AATAAA	-16	NA	36481745	36536032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36481870_36499567_36499795_36501814_36501870_36535549
ES.16399.3	chr18	+	862	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	116	123	1	-1	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTGTGTGACTTACT	NA	False	NA	11	True	AATAAA	-11	NA	36481827	36536027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
ES.16399.4	chr18	+	447	3	FSM	ENSMUSG00000046727.14	ENSMUST00000152804.9	445	3	1	-3	1	0	multi-exon	FALSE	canonical	3	46	junction_2	356.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCAATTCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	36481827	36526426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36481870_36499567_36499795_36526248
ES.16399.5	chr18	+	2444	5	NNC	ENSMUSG00000046727.14	novel	1101	4	NA	NA	1	2063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	31.3807265690264	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTATGATTTTTATTG	NA	False	NA	NA	False	CATAAA	-14	NA	36481827	36528493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36481870_36483746_36483862_36499567_36499795_36526248_36526810_36526994
ES.16399.6	chr18	+	1026	4	NNC	ENSMUSG00000046727.14	novel	1026	5	NA	NA	322	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	427.106804233112	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGCTGTGTGACTT	NA	False	NA	8	True	AATAAA	-8	NA	36482148	36536024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36482358_36483746_36483862_36499567_36499795_36535549
ES.16399.7	chr18	+	4604	1	NIC	ENSMUSG00000046727.14	novel	1385	5	NA	NA	32595	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTTACTCCAGG	388	False	NA	16	True	AATAAA	-16	NA	36531428	36536032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36531400_36536000
ES.164.1	chr1	-	6853	31	NNC	ENSMUSG00000043760.17	novel	12935	67	NA	NA	-23005	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.66699996667333	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCGTGGTTTAAATTC	9027	False	NA	NA	False	AATAAA	-16	NA	20502677	20128005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20128935_20140601_20140725_20143680_20143840_20151409_20151518_20173438_20173527_20174765_20174902_20187153_20188172_20268241_20268400_20269565_20269735_20270743_20271620_20279384_20279538_20282060_20282216_20290262_20290351_20293082_20293197_20309524_20309663_20345742_20345872_20358419_20358486_20380748_20380945_20382256_20382435_20417434_20417682_20420636_20420770_20429063_20429199_20431209_20431316_20434342_20434456_20444079_20444211_20444935_20444993_20447598_20447725_20451626_20451819_20461688_20461847_20462235_20462444_20502411
ES.164.2	chr1	-	2624	18	NNC	ENSMUSG00000043760.17	novel	615	5	NA	NA	-4889	147398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.87498558241285	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGATTTTGAAAGACCAG	NA	False	NA	NA	False	NA	NA	NA	20484561	20297547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20297742_20309524_20309663_20345742_20345872_20358419_20358486_20380748_20380945_20382256_20382435_20417434_20417682_20420636_20420770_20429063_20429199_20431209_20431316_20434342_20434456_20444079_20444211_20444935_20444993_20447598_20447725_20451626_20451819_20461688_20461847_20462235_20462444_20484444
ES.164.3	chr1	-	6264	19	NNC	ENSMUSG00000043760.17	novel	615	5	NA	NA	-23213	139442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.83333333333333	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATTTGTGTGTATCTG	8819	False	NA	NA	False	AATAAA	-23	NA	20502885	20305503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20308768_20309524_20309663_20345742_20345872_20358419_20358486_20380748_20380945_20382256_20382435_20417434_20417682_20420636_20420770_20429063_20429199_20431209_20431316_20434342_20434456_20444079_20444211_20444935_20444993_20447598_20447725_20451626_20451819_20461688_20461847_20462235_20462444_20484444_20484658_20502411
ES.164.4	chr1	-	2885	18	NNC	ENSMUSG00000043760.17	novel	615	5	NA	NA	-22793	136691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.93671501566522	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCTTATGACCAGAGAT	9239	False	NA	NA	False	AGTAAA	-16	NA	20502465	20308254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20308768_20309524_20309663_20345742_20345872_20358419_20358486_20380748_20380945_20382256_20382435_20417434_20417682_20420636_20420770_20429063_20429199_20431209_20431316_20434342_20434456_20444079_20444211_20444935_20444993_20447598_20447725_20451626_20451819_20461688_20461847_20484444_20484658_20502411
ES.164.5	chr1	-	3102	18	NNC	ENSMUSG00000043760.17	novel	615	5	NA	NA	-23091	100062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.8073284112632	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTGAGCATCACAAA	8941	False	NA	NA	False	AATAAA	-19	NA	20502763	20344883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20345246_20345742_20345872_20358419_20358486_20380748_20380945_20382256_20382435_20417434_20417682_20420636_20420770_20429063_20429199_20431209_20431316_20434342_20434456_20444079_20444211_20444935_20444993_20447598_20447725_20451626_20451819_20461688_20461847_20462235_20462444_20484444_20484658_20502411
ES.164.6	chr1	-	497	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAACTTGACTTTTGT	8823	False	NA	NA	False	NA	NA	NA	20502881	20502384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_20502400_20502900
ES.1640.1	chr1	+	129	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155219319	155219448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155219300_155219400
ES.16400.1	chr18	+	5608	1	Antisense	novelGene_ENSMUSG00000024346.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCATTTCTAAGCAAT	7728	False	NA	NA	False	NA	NA	NA	36581310	36586918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_36581300_36586900
ES.16401.1	chr18	-	177	1	Intergenic	novelGene_13708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCACAAGA	NA	False	NA	NA	False	NA	NA	NA	36493002	36492825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36492800_36493000
ES.16402.1	chr18	-	3850	5	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	28	20233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1336.95876899776	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAAATGGTTTGGCCTT	NA	False	NA	NA	False	AATAAA	-29	NA	36587549	36516495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36519902_36537365_36537514_36565358_36565444_36584132_36584300_36587505
ES.16402.10	chr18	-	2892	5	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	17	-21579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1519.032257722	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36587560	36558836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36559801_36562496_36563813_36565053_36565444_36584132_36584300_36587505
ES.16402.11	chr18	-	398	3	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	26	-35319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1526	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	36587551	36572576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36572762_36584132_36584300_36587505
ES.16402.12	chr18	-	5819	2	ISM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	32	41792	32	-41263	5prime_fragment	FALSE	canonical	3	3052	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATCAAGTATGTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	36587545	36578520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_36584300_36587505
ES.16402.2	chr18	-	3636	1	Intergenic	novelGene_13709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATATACAAGGGACCA	NA	False	NA	NA	False	NA	NA	NA	36530456	36526820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36526800_36530500
ES.16402.3	chr18	-	3167	1	Intergenic	novelGene_13710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTTTTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	36531398	36528231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36528200_36531400
ES.16402.4	chr18	-	759	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	-8	358	-8	171	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTCCCTTTTTTCC	NA	False	NA	26	True	NA	NA	NA	36587585	36537086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ES.16402.6	chr18	-	721	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	31	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1463.17675699904	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATGTGCTTTTCTCCA	NA	False	NA	-24	True	AATAAA	-19	NA	36587546	36537136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36537514_36565358_36565444_36584132_36584300_36587454
ES.16402.7	chr18	-	650	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	219	121	at_least_one_novel_splicesite	FALSE	canonical	1	75	junction_3	1427.85487902502	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATGTGCTTTTCTCCA	NA	False	NA	-24	True	AATAAA	-19	NA	36587358	36537136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36537514_36565358_36565444_36584132_36584300_36587337
ES.16402.8	chr18	-	596	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	20	408	20	121	multi-exon	FALSE	canonical	3	64	junction_1	1494	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATGTGCTTTTCTCCA	NA	False	NA	-24	True	AATAAA	-19	NA	36587557	36537136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36537514_36584132_36584300_36587505
ES.16402.9	chr18	-	811	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	316	116	at_least_one_novel_splicesite	FALSE	canonical	3	254	junction_3	1343.56044399449	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATGGCATGTGCTTTT	NA	False	NA	-29	True	AATAAA	-14	NA	36587261	36537141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36537514_36565358_36565444_36584132_36584300_36587074
ES.16403.1	chr18	+	176	1	Intergenic	novelGene_13711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAACACAGTA	2403	False	NA	NA	False	NA	NA	NA	36600188	36600364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36600200_36600400
ES.16404.1	chr18	-	124	1	Intergenic	novelGene_13712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36625475	36625351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36625400_36625500
ES.16405.1	chr18	-	2388	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	-15	2	-15	-2	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGTTTCATTTTTGG	NA	False	NA	-12	True	AATAAA	-20	NA	36648873	36637981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ES.16405.2	chr18	-	1750	4	NNC	ENSMUSG00000024486.7	novel	2375	6	NA	NA	7211	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	26.0810701893581	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTCTGTTTCATTTTT	NA	False	NA	-14	True	AATAAA	-18	NA	36641209	36637983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36639418_36639687_36639779_36640501_36640658_36641140
ES.16405.3	chr18	-	4634	3	NIC	ENSMUSG00000024486.7	novel	2375	6	NA	NA	124	-8	intron_retention	FALSE	canonical	3	41	junction_2	10.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCATGTTCTGTTTCAT	NA	False	NA	-18	True	AATAAA	-14	NA	36648296	36637987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36639779_36640501_36640658_36645609
ES.16406.1	chr18	+	3074	21	NNC	ENSMUSG00000024485.17	novel	3008	21	NA	NA	1	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.963068014212911	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	36661200	36689310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36661458_36661695_36661857_36662268_36662383_36662739_36662790_36662925_36663084_36663328_36663417_36663766_36663922_36664152_36664270_36664404_36664580_36664730_36664865_36665022_36665286_36666237_36666297_36666629_36666816_36666941_36667056_36668334_36668497_36668575_36668755_36669899_36669973_36672656_36672831_36673842_36673945_36674251_36674345_36689050
ES.16406.2	chr18	+	924	4	NIC	ENSMUSG00000024485.17	novel	3348	21	NA	NA	3927	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACAATATGTGGTC	2680	False	NA	NA	False	NA	NA	NA	36668014	36689326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36668497_36669899_36669973_36674251_36674345_36689050
ES.16406.3	chr18	+	923	2	Intergenic	novelGene_13713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6412	False	NA	NA	False	NA	NA	NA	36685995	36686982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36686867_36686930
ES.16407.1	chr18	+	889	1	Intergenic	novelGene_13714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAAAAAAGAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	36690771	36691660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36690800_36691700
ES.16408.1	chr18	+	7915	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	3518	9	NA	NA	-18	1	multi-exon	FALSE	canonical	3	11	junction_1	40.2973032976305	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTCCATTGTTGTCCT	NA	False	NA	34	True	AGTAAA	-16	NA	36693021	36798971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36693155_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.10	chr18	+	7653	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-186	0	multi-exon	FALSE	canonical	3	35	junction_29	36.6347349687202	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCATTGTTGTCC	NA	False	NA	33	True	AGTAAA	-15	NA	36693477	36798970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.11	chr18	+	7339	16	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-177	-4290	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	39.0142993728653	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTCTGATTGTCATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	36693486	36763120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36759056
ES.16408.12	chr18	+	8118	15	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	-176	28839	-176	-4288	5prime_fragment	FALSE	canonical	3	51	junction_13	20.0229460206768	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGATTGTCATTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	36693487	36763122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561
ES.16408.13	chr18	+	8432	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-160	-2	multi-exon	FALSE	canonical	3	35	junction_30	35.0868310664516	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693503	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.14	chr18	+	7763	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-39	-2	multi-exon	FALSE	canonical	0	0	junction_1	44.6639515877018	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693624	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36705711_36705872_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.15	chr18	+	7422	29	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	-27	9744	-27	4894	5prime_fragment	FALSE	canonical	3	51	junction_13	23.3499060435989	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	36693636	36782217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183
ES.16408.16	chr18	+	4464	25	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	30.0744446702216	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAACAGAAAAGGAAACA	NA	False	NA	NA	False	AAAAAG	-7	NA	36693637	36776053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ES.16408.17	chr18	+	7548	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-26	-2	multi-exon	FALSE	canonical	3	16	junction_2	37.9961298338784	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693637	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.18	chr18	+	7535	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-26	-2	multi-exon	FALSE	canonical	0	0	junction_33	39.0047020499698	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693637	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798341_36798509_36798643
ES.16408.19	chr18	+	8293	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-25	-2	multi-exon	FALSE	canonical	3	6	junction_35	39.4675169976423	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693638	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798496_36798643
ES.16408.2	chr18	+	7835	34	NNC	ENSMUSG00000024483.20	novel	3518	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.3999062594509	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693030	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36693088_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.20	chr18	+	8357	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-25	7	multi-exon	FALSE	canonical	3	51	junction_13	31.0697700706796	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGTTGTCCTCAGTGC	NA	False	NA	40	True	AGTAAA	-22	NA	36693638	36798977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.21	chr18	+	3747	24	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-24	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.9637302374844	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAACAGAAAAGGAAACA	NA	False	NA	NA	False	AAAAAG	-7	NA	36693639	36776053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771255_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ES.16408.22	chr18	+	7427	33	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_32	37.2665520062898	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693649	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.23	chr18	+	3763	9	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	-12	61972	-12	12944	5prime_fragment	FALSE	canonical	3	105	junction_2	6.557438524302	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATAAACTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	36693651	36729989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854
ES.16408.24	chr18	+	7350	33	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-10	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.9236240315284	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAATGAACAGTGT	NA	False	NA	-9	True	NA	NA	NA	36693653	36791942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728041_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.25	chr18	+	7426	33	NIC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_32	33.7814089959256	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693653	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.26	chr18	+	7393	33	NIC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	37.5666984966406	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693653	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789771_36789888_36791026_36791192_36791452
ES.16408.27	chr18	+	8200	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-10	-3	multi-exon	FALSE	canonical	3	9	junction_31	39.2091617781729	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGCTCCATTGTTG	NA	False	NA	30	True	AGTAAA	-12	NA	36693653	36798967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789771_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.28	chr18	+	8233	34	FSM	ENSMUSG00000024483.20	ENSMUST00000155329.9	8223	34	-10	0	-10	0	multi-exon	FALSE	canonical	3	27	junction_33	32.0795613324134	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693653	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.29	chr18	+	7644	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-9	-9	multi-exon	FALSE	canonical	2	3	junction_34	45.3152585015381	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36693654	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36797226_36797356_36798334_36798509_36798643
ES.16408.3	chr18	+	7184	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	3518	9	NA	NA	-8	-9	multi-exon	FALSE	canonical	3	11	junction_1	41.7958148432149	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36693031	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36693155_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.30	chr18	+	8183	34	NIC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_33	32.0795613324134	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693655	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.31	chr18	+	8241	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-8	-2	multi-exon	FALSE	canonical	3	16	junction_2	36.4658520721365	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693655	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.32	chr18	+	8410	37	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-6	-2	multi-exon	FALSE	canonical	2	3	junction_35	41.2957845425856	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693657	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36797226_36797356_36798334_36798509_36798643
ES.16408.33	chr18	+	9459	34	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	35	junction_29	34.6237549626481	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGCTCCATTGTTG	NA	False	NA	30	True	AGTAAA	-12	NA	36693657	36798967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.35	chr18	+	8230	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-6	-2	multi-exon	FALSE	canonical	3	35	junction_30	35.0868310664516	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693657	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.36	chr18	+	3775	24	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	24.6981015319328	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAACAGAAAAGGAAACA	NA	False	NA	NA	False	AAAAAG	-7	NA	36693657	36776053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ES.16408.38	chr18	+	8139	34	NNC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	37.045228356501	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693657	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.39	chr18	+	7371	33	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_32	37.2665520062898	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693657	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.4	chr18	+	7145	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	3518	9	NA	NA	-8	0	multi-exon	FALSE	canonical	3	11	junction_1	41.7958148432149	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCATTGTTGTCC	NA	False	NA	33	True	AGTAAA	-15	NA	36693031	36798970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36693155_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.41	chr18	+	7528	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-4	-9	multi-exon	FALSE	canonical	2	4	junction_2	39.1023411010744	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36693659	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711703_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.42	chr18	+	7424	33	NNC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	38.6608728036176	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36693661	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.43	chr18	+	8180	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	2	-2	multi-exon	FALSE	canonical	3	16	junction_2	39.788973962388	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693665	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.44	chr18	+	4499	25	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	3	15934	3	-14	5prime_fragment	FALSE	canonical	3	51	junction_13	21.916468630284	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36693666	36776027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ES.16408.45	chr18	+	2597	10	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	5	57349	5	17567	5prime_fragment	FALSE	canonical	3	105	junction_2	7.96907603424049	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTGGTTGACTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	36693668	36734612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818
ES.16408.46	chr18	+	8343	37	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	5	-9	multi-exon	FALSE	canonical	0	0	junction_15	45.5507111245326	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36693668	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36761529_36761661_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.47	chr18	+	8224	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	5	-3	multi-exon	FALSE	canonical	3	16	junction_2	39.788973962388	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGCTCCATTGTTG	NA	False	NA	30	True	AGTAAA	-12	NA	36693668	36798967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.48	chr18	+	7196	16	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	5	-4293	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	32.3031474214717	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGTTCTGATTGTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	36693668	36763117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36759056
ES.16408.49	chr18	+	7470	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	5	-1	multi-exon	FALSE	canonical	3	16	junction_2	37.9961298338784	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGCTCCATTGTTGTC	NA	False	NA	32	True	AGTAAA	-14	NA	36693668	36798969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.5	chr18	+	8912	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-6	5	multi-exon	FALSE	canonical	3	51	junction_13	31.0697700706796	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTGTCCTCAGT	NA	False	NA	38	True	AGTAAA	-20	NA	36693033	36798975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.50	chr18	+	7509	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	5	-1	multi-exon	FALSE	canonical	3	35	junction_29	36.6347349687202	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGCTCCATTGTTGTC	NA	False	NA	32	True	AGTAAA	-14	NA	36693668	36798969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.51	chr18	+	8448	37	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	5	-1	multi-exon	FALSE	canonical	2	3	junction_35	41.2957845425856	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGCTCCATTGTTGTC	NA	False	NA	32	True	AGTAAA	-14	NA	36693668	36798969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36797226_36797356_36798334_36798509_36798643
ES.16408.52	chr18	+	2312	2	ISM	ENSMUSG00000024483.20	ENSMUST00000006205.14	8200	34	7	82016	7	-6789	5prime_fragment	FALSE	canonical	3	112	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAACGAAATTAATA	NA	False	NA	NA	False	NA	NA	NA	36693670	36709945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36694109_36708071
ES.16408.53	chr18	+	8303	37	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	9	-2	multi-exon	FALSE	canonical	0	0	junction_23	48.5769721392989	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693672	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774451_36774559_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791093_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.56	chr18	+	7667	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_22	39.7205746237754	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693690	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774451_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.58	chr18	+	8251	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	30	-2	multi-exon	FALSE	canonical	3	16	junction_2	36.4658520721365	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693693	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.59	chr18	+	3696	24	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	31	6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	32.3951267076475	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAACAGAAAAGGAAACA	NA	False	NA	NA	False	AAAAAG	-7	NA	36693694	36776053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978
ES.16408.6	chr18	+	7900	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	3518	9	NA	NA	9	-2	multi-exon	FALSE	canonical	3	9	junction_31	43.5961990479511	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	NA	False	NA	31	True	AGTAAA	-13	NA	36693048	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36693155_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789771_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.60	chr18	+	8204	36	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	57	-3	multi-exon	FALSE	canonical	3	6	junction_35	34.9720588178503	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGCTCCATTGTTG	NA	False	NA	30	True	AGTAAA	-12	NA	36693720	36798967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798496_36798643
ES.16408.61	chr18	+	7101	16	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	57	-4288	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	32.3031474214717	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGATTGTCATTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	36693720	36763122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36759056
ES.16408.62	chr18	+	8056	34	NNC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	36.5229841970183	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGGAGTGGGGTGTGA	NA	False	NA	8	True	AATAAA	-12	NA	36693729	36791959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791077_36791192_36791452
ES.16408.63	chr18	+	7151	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	270	-4	multi-exon	FALSE	canonical	3	16	junction_2	41.2911114206549	323	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGGCTCCATTGTT	NA	False	NA	29	True	AGTAAA	-11	NA	36693933	36798966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711712_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.64	chr18	+	7324	32	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	350	0	intron_retention	FALSE	canonical	3	35	junction_29	33.5873842824124	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36694013	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026
ES.16408.65	chr18	+	3343	1	Intergenic	novelGene_13716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAAGGTTTGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	36702074	36705417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36702100_36705400
ES.16408.66	chr18	+	1103	1	Intergenic	novelGene_13717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTGTTGGATAGATGT	355	False	NA	NA	False	NA	NA	NA	36709589	36710692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36709600_36710700
ES.16408.67	chr18	+	4857	1	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-1941	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGAGCATTGGTGA	2954	False	NA	NA	False	NA	NA	NA	36712188	36717045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36712200_36717000
ES.16408.68	chr18	+	1283	2	FSM	ENSMUSG00000024483.20	ENSMUST00000143966.2	520	2	-763	0	-763	0	multi-exon	FALSE	canonical	3	122	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGAGCATTGGTGA	4132	False	NA	NA	False	NA	NA	NA	36713366	36717045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36714269_36716664
ES.16408.69	chr18	+	2529	12	NNC	ENSMUSG00000117942.2	novel	2235	8	NA	NA	-64158	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	55.9127123734726	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	3061	False	NA	24	True	AGTAAA	-6	NA	36716754	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36716813_36722400_36722635_36724499_36724595_36727137_36727340_36781198_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.7	chr18	+	7124	33	NNC	ENSMUSG00000024483.20	novel	3518	9	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.1870139939508	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGGAGTGGGGTGTGA	NA	False	NA	8	True	AATAAA	-12	NA	36693048	36791959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36693156_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.70	chr18	+	2790	11	NNC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	8341	1798	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	38.7582249335544	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTGAATGCATG	2243	False	NA	NA	False	AATAAA	-21	NA	36722470	36759873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36759056
ES.16408.71	chr18	+	6804	28	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-9316	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_27	38.9286921524771	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	4309	False	NA	10	True	AATAAA	-14	NA	36724536	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.72	chr18	+	6299	25	NIC	ENSMUSG00000024483.20	novel	8223	34	NA	NA	-6715	0	intron_retention	FALSE	canonical	3	51	junction_6	31.7496445736886	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	822	False	NA	10	True	AATAAA	-14	NA	36727137	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026
ES.16408.73	chr18	+	6262	31	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-5920	-2	multi-exon	FALSE	canonical	0	0	junction_7	58.4101303999001	316	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGCTCCATTGTTGT	308	False	NA	31	True	AGTAAA	-13	NA	36727932	36798968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36757742_36758172_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774451_36774496_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452_36791521_36794049_36794160_36798334_36798509_36798643
ES.16408.74	chr18	+	6363	25	NIC	ENSMUSG00000024483.20	novel	8200	34	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_24	41.0837347850568	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGGAGTGGGGTGTGA	6193	False	NA	8	True	AATAAA	-12	NA	36733817	36791959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.75	chr18	+	6301	26	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	-2111	-9	multi-exon	FALSE	canonical	3	35	junction_20	39.5791055987879	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	145	False	NA	24	True	AGTAAA	-6	NA	36744850	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.76	chr18	+	6178	25	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8200	34	NA	NA	6	-9	multi-exon	FALSE	canonical	2	3	junction_23	53.1943501594755	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	2262	False	NA	24	True	AGTAAA	-6	NA	36746967	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36797226_36797356_36798334_36798509_36798643
ES.16408.77	chr18	+	6601	23	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-160	-9	multi-exon	FALSE	canonical	3	87	junction_1	29.9650278251495	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	2499	False	NA	24	True	AGTAAA	-6	NA	36747204	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.78	chr18	+	8375	22	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	7762	-4	multi-exon	FALSE	canonical	3	95	junction_1	27.7189490431081	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGGCTCCATTGTT	1682	False	NA	29	True	AGTAAA	-11	NA	36755126	36798966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.79	chr18	+	5984	23	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	10302	-9	multi-exon	FALSE	canonical	0	0	junction_2	49.0070833132929	300	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	4222	False	NA	24	True	AGTAAA	-6	NA	36757666	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36758321_36759056_36759211_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.8	chr18	+	8175	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	18	3	multi-exon	FALSE	canonical	3	51	junction_13	32.6766823734335	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCATTGTTGTCCTCA	NA	False	NA	36	True	AGTAAA	-18	NA	36693057	36798973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.80	chr18	+	185	1	Intergenic	novelGene_13720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATATTTGTTTTAAGTA	1287	False	NA	NA	False	NA	NA	NA	36761540	36761725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36761500_36761700
ES.16408.81	chr18	+	5086	19	ISM	ENSMUSG00000024483.20	ENSMUST00000155329.9	8223	34	71453	0	-6260	0	3prime_fragment	FALSE	canonical	3	27	junction_18	34.3478933528357	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	4863	False	NA	10	True	AATAAA	-14	NA	36765116	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36791452
ES.16408.83	chr18	+	3839	12	NNC	ENSMUSG00000117942.2	novel	2235	8	NA	NA	-7553	-7009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	59.7963485991003	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTGGGGTGTGATC	NA	False	NA	10	True	AATAAA	-14	NA	36773359	36791961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789888_36791077_36791192_36791452
ES.16408.84	chr18	+	4364	13	NIC	ENSMUSG00000117942.2	novel	2235	8	NA	NA	-6238	420	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	29.4093475313925	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGTTTCTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36774674	36799390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.85	chr18	+	3695	11	NIC	ENSMUSG00000117942.2	novel	2235	8	NA	NA	-3600	-9	combination_of_known_splicesites	FALSE	canonical	3	120	junction_5	25.7379097830418	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36777312	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.87	chr18	+	2956	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	-730	9	-730	-9	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36780182	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.88	chr18	+	4179	8	NNC	ENSMUSG00000117942.2	novel	2235	8	NA	NA	593	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.9759144999382	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36781505	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791077_36791192_36791452_36794160_36798334_36798509_36798643
ES.16408.89	chr18	+	3620	1	Intergenic	novelGene_13721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGAGATGGCTCAGC	NA	False	NA	NA	False	NA	NA	NA	36782051	36785671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36782100_36785700
ES.16408.9	chr18	+	7712	35	Fusion	ENSMUSG00000024483.20_ENSMUSG00000090264.2	novel	8223	34	NA	NA	-194	0	multi-exon	FALSE	canonical	3	51	junction_13	32.6766823734335	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCATTGTTGTCC	NA	False	NA	33	True	AGTAAA	-15	NA	36693469	36798970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747815_36747871_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ES.16408.90	chr18	+	3387	3	ISM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	10352	9	10352	-9	3prime_fragment	FALSE	canonical	3	173	junction_1	19	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	8011	False	NA	24	True	AGTAAA	-6	NA	36791264	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36794160_36798334_36798509_36798643
ES.16408.91	chr18	+	5287	2	NIC	ENSMUSG00000090264.2	novel	744	3	NA	NA	-3573	-9	intron_retention	FALSE	canonical	3	211	junction_1	0	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	False	NA	24	True	AGTAAA	-6	NA	36793539	36798961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36798509_36798643
ES.16409.1	chr18	-	1065	1	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGCTCCTCACTAATTC	7289	False	NA	NA	False	AATAAA	-15	NA	36693269	36692204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_36692200_36693300
ES.16409.2	chr18	-	919	2	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAATTAAAAGTG	7291	False	NA	NA	False	NA	NA	NA	36693267	36692224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_36692806_36692929
ES.1641.1	chr1	-	9758	14	FSM	ENSMUSG00000026469.15	ENSMUST00000111774.2	2753	14	6	-7011	-2	44	multi-exon	FALSE	canonical	2	7	junction_4	3.83073833784269	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACTCGTCACTGGTGA	NA	False	NA	44	True	NA	NA	NA	155293155	155151402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ES.1641.2	chr1	-	7626	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-93	-41	-7	41	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGACTCGTCACTGG	NA	False	NA	41	True	NA	NA	NA	155293168	155151405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ES.1641.3	chr1	-	7308	14	NNC	ENSMUSG00000026469.15	novel	7492	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4.70930088154276	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCTTTTTCATTAT	NA	False	NA	0	True	AAGAAA	-20	NA	155293155	155151446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204383_155207976_155208133_155221298_155221401_155260356_155260409_155292911
ES.1641.4	chr1	-	4503	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-88	3077	-2	204	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCTGTGAATTGTCAG	NA	False	NA	-2	True	AATAAA	-21	NA	155293163	155154523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ES.1641.5	chr1	-	4351	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-86	3227	0	54	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTTTTCCCTTACTA	NA	False	NA	NA	False	ATTAAA	-19	NA	155293161	155154673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ES.1641.6	chr1	-	227	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGACATCAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	155163748	155163521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155163500_155163700
ES.1641.7	chr1	-	3445	1	FSM	ENSMUSG00000026469.15	ENSMUST00000192359.2	2738	1	-2135	1428	-2135	-1428	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAGACAAAACTTGTC	NA	False	NA	NA	False	NA	NA	NA	155169908	155166463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155166500_155169900
ES.1641.8	chr1	-	7899	1	Genic_Genomic	ENSMUSG00000026469.15	novel	NA	NA	NA	NA	2066	6894	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGGAAAAATGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	155258342	155250443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_155250400_155258300
ES.1641.9	chr1	-	180	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGGACCATGTAGAGA	8183	False	NA	NA	False	NA	NA	NA	155272253	155272073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155272100_155272300
ES.16410.1	chr18	-	3295	1	Intergenic	novelGene_13715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTCTTCTCCACGGG	556	False	NA	NA	False	NA	NA	NA	36700002	36696707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36696700_36700000
ES.16411.1	chr18	-	157	1	Intergenic	novelGene_13718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	529	False	NA	NA	False	NA	NA	NA	36734373	36734216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36734200_36734400
ES.16412.1	chr18	-	176	1	Intergenic	novelGene_13719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTCA	9112	False	NA	NA	False	NA	NA	NA	36757115	36756939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36756900_36757100
ES.16413.1	chr18	-	4630	9	Antisense	novelGene_ENSMUSG00000024483.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAGAAAAAAAAAA	2491	False	NA	NA	False	NA	NA	NA	36780677	36768581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_36771432_36771596_36771760_36773315_36773412_36774627_36774745_36775976_36776147_36777312_36777767_36778156_36778291_36779741_36779892_36780181
ES.16414.1	chr18	-	150	1	Intergenic	novelGene_13722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAATAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36786644	36786494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36786500_36786600
ES.16415.1	chr18	-	1365	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	526	88	1	-88	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAGTCAAATCATCT	NA	False	NA	NA	False	NA	NA	NA	36803342	36799821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ES.16415.10	chr18	-	781	4	NNC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	665.096150108305	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTCTGATGTCAGACT	NA	False	NA	-10	True	NA	NA	NA	36803342	36800299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36800716_36801704_36801902_36803056_36803183_36803300
ES.16415.11	chr18	-	2575	13	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	1979	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_5	665.13149806803	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTCTGATGTCAGACT	NA	False	NA	-10	True	NA	NA	NA	36812368	36800299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36803394_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36810049_36810162_36810310_36810497_36810559_36812049
ES.16415.12	chr18	-	5131	12	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	-109	1	intron_retention	FALSE	canonical	3	26	junction_11	672.641530162369	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATTCTGATGTCAGAC	NA	False	NA	-11	True	NA	NA	NA	36812528	36800300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36804729_36808002_36808195_36808333_36808450_36808715_36809309_36809415_36810310_36810497_36810559_36811446_36811524_36811602
ES.16415.13	chr18	-	3903	10	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	-116	-4	intron_retention	FALSE	canonical	3	35	junction_9	693.347667230749	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTGGGAAGTGGGTA	NA	False	NA	-39	True	NA	NA	NA	36810311	36800328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36804729_36808002_36808195_36808333_36808450_36808715_36809309_36809415_36809531_36809669_36810046_36810162
ES.16415.14	chr18	-	3771	14	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	20	-6	intron_retention	FALSE	canonical	3	5	junction_13	647.66332842168	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATGGTGGGAAGTGGG	NA	False	NA	-41	True	NA	NA	NA	36812399	36800330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810049_36810162_36810310_36810497_36810559_36812049
ES.16415.15	chr18	-	849	5	FSM	ENSMUSG00000006050.13	ENSMUST00000006209.5	695	5	-4	-150	1	-7	multi-exon	FALSE	canonical	3	109	junction_2	590.993443280042	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAATGGTGGGAAGTGG	NA	False	NA	-42	True	NA	NA	NA	36803342	36800331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ES.16415.16	chr18	-	4280	14	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	1	-9	intron_retention	FALSE	canonical	3	26	junction_12	646.123781351842	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCAATGGTGGGAAGT	NA	False	NA	-44	True	NA	NA	NA	36812368	36800333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.17	chr18	-	1730	3	NIC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	-2	-14	intron_retention	FALSE	canonical	3	1172	junction_2	197	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACATCTCAATGGTGG	NA	False	NA	-49	True	NA	NA	NA	36803341	36800338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36801902_36803056_36803183_36803300
ES.16415.18	chr18	-	660	5	NNC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	619.034480057452	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACATCTCAATGGTGG	NA	False	NA	-49	True	NA	NA	NA	36803342	36800338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36800713_36800843_36800953_36801704_36801785_36803127_36803183_36803300
ES.16415.19	chr18	-	351	2	FSM	ENSMUSG00000006050.13	ENSMUST00000174125.2	337	2	-13	-1	1	1	multi-exon	FALSE	canonical	3	1172	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGACTCCAAACTCTCA	NA	False	NA	NA	False	AGTAAA	-14	NA	36803342	36802873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36803183_36803300
ES.16415.2	chr18	-	1199	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	526	254	1	-254	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACAAGATTTCTGCA	NA	False	NA	NA	False	AATAGA	-39	NA	36803342	36799987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ES.16415.20	chr18	-	3361	9	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-17	1	intron_retention	FALSE	canonical	3	38	junction_8	9.89870572347719	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGATGAGTATATTGACC	NA	False	NA	-1	True	AATAAA	-20	NA	36812386	36804205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810310_36810497_36811767_36812049
ES.16415.21	chr18	-	2075	12	NNC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	19.540591361159	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTGATGAGTATATTGA	NA	False	NA	-3	True	AATAAA	-18	NA	36812428	36804207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809537_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.22	chr18	-	2195	12	NIC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	-134	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	21.6474379603669	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGTGATGAGTATATT	NA	False	NA	-5	True	AATAAA	-16	NA	36812553	36804209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809917_36810049_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.23	chr18	-	2017	10	NNC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	18	-2	intron_retention	FALSE	canonical	0	0	junction_5	23.1169864326732	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGTGATGAGTATATT	NA	False	NA	-5	True	AATAAA	-16	NA	36812401	36804209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809445_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36812049
ES.16415.25	chr18	-	2561	12	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-127	-2	intron_retention	FALSE	canonical	2	4	junction_3	18.6569730832228	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGTGATGAGTATATT	NA	False	NA	-5	True	AATAAA	-16	NA	36812546	36804209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36804729_36808002_36808195_36808333_36808578_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.26	chr18	-	3425	9	NNC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	-109	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	24.7988785028678	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTAGTGATGAGTATAT	NA	False	NA	-6	True	AATAAA	-15	NA	36812528	36804210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809537_36809917_36810049_36810162_36810310_36810497
ES.16415.27	chr18	-	1982	13	NNC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	-69	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.7888486431003	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTAGTGATGAGTATAT	NA	False	NA	-6	True	AATAAA	-15	NA	36812193	36804210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36809821_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.28	chr18	-	3944	6	ISM	ENSMUSG00000117679.2	ENSMUST00000236001.2	2258	12	3	5	3	-5	intron_retention	FALSE	canonical	3	51	junction_4	8.58836422143356	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	False	NA	-8	True	AATAAA	-13	NA	36812366	36804212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415
ES.16415.29	chr18	-	2274	12	FSM	ENSMUSG00000117679.2	ENSMUST00000236001.2	2258	12	-21	5	-21	-5	multi-exon	FALSE	canonical	3	26	junction_10	13.4925752462923	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	False	NA	-8	True	AATAAA	-13	NA	36812390	36804212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.3	chr18	-	1037	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	515	427	-10	138	multi-exon	FALSE	canonical	3	1172	junction_4	156.810992918226	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATTTATATTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	36803353	36800160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ES.16415.30	chr18	-	3397	7	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	26	junction_5	16.6474889664745	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	False	NA	-8	True	AATAAA	-13	NA	36812379	36804212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36804729_36808002_36808195_36808333_36809309_36809415_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.31	chr18	-	2134	12	NNC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	-67	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	21.9432024151309	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	False	NA	-8	True	AATAAA	-13	NA	36812486	36804212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809409_36809537_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.32	chr18	-	1123	6	NNC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-36	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.6327196774935	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	False	NA	-8	True	AATAAA	-13	NA	36812160	36804212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36804729_36808002_36808191_36808333_36808450_36809223_36809257_36811607_36811767_36812049
ES.16415.33	chr18	-	2598	10	NIC	ENSMUSG00000117679.2	novel	2258	12	NA	NA	-17	-7	intron_retention	FALSE	canonical	3	9	junction_6	18.6990459913776	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCACTAGTGATGAGT	NA	False	NA	-10	True	AATAAA	-11	NA	36812386	36804214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36810049_36810162_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.34	chr18	-	3411	7	NNC	ENSMUSG00000117679.2	novel	567	5	NA	NA	7	-269	intron_retention	FALSE	canonical	0	0	junction_1	23.3737744776776	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAAGGTGTCTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	36812362	36804938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36805065_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669
ES.16415.4	chr18	-	827	4	FSM	ENSMUSG00000006050.13	ENSMUST00000236330.2	760	4	-7	-60	-7	57	multi-exon	FALSE	canonical	3	29	junction_3	696.127542592272	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTGTCTCATTCATC	NA	False	NA	48	True	NA	NA	NA	36803350	36800241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803300
ES.16415.5	chr18	-	3803	16	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	-13	9	intron_retention	FALSE	canonical	2	4	junction_7	624.777919655368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGACTGGTTCTTTGT	NA	False	NA	0	True	NA	NA	NA	36812137	36800289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36804729_36808002_36808195_36808449_36808578_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810049_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.6	chr18	-	1639	4	NIC	ENSMUSG00000006050.13	novel	695	5	NA	NA	0	3	intron_retention	FALSE	canonical	3	1172	junction_3	179.707787502069	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGTCAGACTGGTT	NA	False	NA	-6	True	NA	NA	NA	36803338	36800295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36800713_36800843_36801902_36803056_36803183_36803300
ES.16415.7	chr18	-	2703	13	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	726	8	NA	NA	-46	2	intron_retention	FALSE	canonical	0	0	junction_4	647.530887294189	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGATGTCAGACTGGT	NA	False	NA	-7	True	NA	NA	NA	36812170	36800296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36808002_36808195_36808449_36808578_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.8	chr18	-	4052	16	Fusion	ENSMUSG00000117679.2_ENSMUSG00000006050.13	novel	2258	12	NA	NA	8	-1	intron_retention	FALSE	canonical	3	26	junction_14	618.954028090042	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTCTGATGTCAGACT	NA	False	NA	-10	True	NA	NA	NA	36812411	36800299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ES.16415.9	chr18	-	1017	4	NIC	ENSMUSG00000006050.13	novel	1979	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1172	junction_3	167.748488981438	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTCTGATGTCAGACT	NA	False	NA	-10	True	NA	NA	NA	36803341	36800299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36800953_36801704_36801902_36803056_36803183_36803300
ES.16416.1	chr18	+	2375	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	-6	-7	-6	-1	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812625	36816913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ES.16416.10	chr18	+	4151	2	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	7	-1	intron_retention	FALSE	canonical	3	118	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACAGTTGTCCTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	36812651	36816910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36814819_36814926
ES.16416.11	chr18	+	1689	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	20	653	7	-653	multi-exon	FALSE	canonical	3	118	junction_3	140.362229804017	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAGCTAAGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	36812651	36816253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ES.16416.12	chr18	+	4257	1	NIC	ENSMUSG00000033272.13	novel	2842	3	NA	NA	-8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACAGTTGTCCTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	36812653	36816910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36812700_36816900
ES.16416.13	chr18	+	3237	3	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	118	junction_2	171.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812655	36816913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36813668_36814580_36814819_36814926
ES.16416.14	chr18	+	2513	2	ISM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	834	7	817	-2	3prime_fragment	FALSE	canonical	3	461	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTACAGTTGTCC	NA	False	NA	9	True	AATAAA	-27	NA	36813478	36816904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36813668_36814580
ES.16416.2	chr18	+	2483	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	-12	-9	1	6	multi-exon	FALSE	canonical	3	269	junction_1	96	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTCTGTGTTTCC	NA	False	NA	25	True	AATAAA	-43	NA	36812632	36816920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568_36813668_36814580
ES.16416.3	chr18	+	3386	2	FSM	ENSMUSG00000033272.13	ENSMUST00000168343.8	476	2	-9	-2901	0	-1	multi-exon	FALSE	canonical	3	269	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812635	36816913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568
ES.16416.4	chr18	+	2557	3	FSM	ENSMUSG00000033272.13	ENSMUST00000170288.2	403	3	4	-2158	4	-1	multi-exon	FALSE	canonical	3	17	junction_1	222	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812639	36816913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813480_36813668_36814580
ES.16416.5	chr18	+	2255	3	NIC	ENSMUSG00000033272.13	novel	2462	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	59	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGTTGTCCTGTCTTC	NA	False	NA	16	True	AATAAA	-34	NA	36812644	36816911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36812677_36814580_36814819_36814926
ES.16416.6	chr18	+	2449	4	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	190.025144535021	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGTCTTCTGTGTTT	NA	False	NA	23	True	AATAAA	-41	NA	36812644	36816918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36812677_36813480_36813668_36814580_36814819_36814926
ES.16416.7	chr18	+	1375	3	NNC	ENSMUSG00000033272.13	novel	2462	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	134.5	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCCTGTCTTCTG	NA	False	NA	18	True	AATAAA	-36	NA	36812644	36816913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36812677_36813568_36813611_36815612
ES.16416.8	chr18	+	2119	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	1	342	1	-337	multi-exon	FALSE	canonical	3	269	junction_1	96	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGCTGTTCCCCTCA	NA	False	NA	NA	False	TATAAA	-20	NA	36812645	36816569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568_36813668_36814580
ES.16416.9	chr18	+	1888	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	4	570	4	-565	multi-exon	FALSE	canonical	3	269	junction_1	96	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTAACTGCACTCCT	NA	False	NA	NA	False	CATAAA	-19	NA	36812648	36816341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36812677_36813568_36813668_36814580
ES.16417.1	chr18	-	4449	16	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-177	729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.16649122321011	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCCTCTATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	36829155	36817246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36818643_36818699_36818859_36819741_36819907_36820298_36820370_36821210_36821269_36821937_36822016_36822086_36822296_36822899_36823024_36823140_36824628_36825266_36825366_36825451_36825539_36826090_36826174_36827736_36827815_36828592_36828713_36828850_36828899_36828968
ES.16417.2	chr18	-	2901	15	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-147	709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.17124059336724	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCCATTTGTACTCTT	NA	False	NA	NA	False	NA	NA	NA	36829125	36817266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36818622_36818699_36818859_36819741_36819907_36820298_36820370_36821210_36821269_36821937_36822016_36822086_36822296_36824493_36824628_36825266_36825366_36825451_36825539_36826090_36826174_36827736_36827815_36828592_36828713_36828850_36828899_36828968
ES.16417.3	chr18	-	4101	14	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-144	-324	intron_retention	TRUE	canonical	0	0	junction_2	2.76067052998867	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTCCTTTTACCAAT	NA	False	NA	NA	False	NA	NA	NA	36829122	36818299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36818622_36818699_36818859_36819741_36819907_36820298_36820370_36821210_36821269_36821937_36822016_36822086_36824628_36825266_36825366_36825451_36825539_36826090_36826174_36827736_36827815_36828592_36828751_36828850_36828899_36828968
ES.16417.4	chr18	-	6657	8	NNC	ENSMUSG00000044719.6	novel	2016	13	NA	NA	-162	-336	intron_retention	FALSE	canonical	0	0	junction_1	2.6954231805876	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACCACTAACCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	36829140	36818311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36818859_36819741_36821269_36821937_36822016_36822086_36826174_36827736_36827815_36828592_36828713_36828850_36828899_36828968
ES.16417.5	chr18	-	111	1	Intergenic	novelGene_13723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	36827458	36827347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36827300_36827500
ES.16417.6	chr18	-	180	1	Intergenic	novelGene_13724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAATATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	36828286	36828106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36828100_36828300
ES.16418.1	chr18	-	203	1	Intergenic	novelGene_13725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATATGTACAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	36830804	36830601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36830600_36830800
ES.16419.1	chr18	+	250	1	Intergenic	novelGene_13726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAATAAATACAT	NA	False	NA	NA	False	NA	NA	NA	36845502	36845752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36845500_36845800
ES.1642.1	chr1	-	157	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	155363459	155363302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155363300_155363500
ES.16420.1	chr18	-	1263	1	FSM	ENSMUSG00000051439.8	ENSMUST00000237042.2	868	1	402	-797	402	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACAATGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	36859389	36858126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36858100_36859400
ES.16421.1	chr18	+	1870	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	-51	4	-22	-4	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACTTTGCCTCAGTG	NA	False	NA	49	True	AATAAA	-16	NA	36868069	36875446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ES.16421.10	chr18	+	2413	10	NIC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	0	-6	intron_retention	FALSE	canonical	3	53	junction_4	9.43986817233753	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTACTTTGCCTCAG	NA	False	NA	47	True	AATAAA	-14	NA	36868219	36875444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871798_36872005_36872118_36872207_36872395_36874104_36874883_36875099
ES.16421.2	chr18	+	3635	3	FSM	ENSMUSG00000006850.9	ENSMUST00000237079.2	665	3	-103	-2867	0	928	multi-exon	FALSE	canonical	3	63	junction_1	3	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCTGATGCTCTTATCC	NA	False	NA	NA	False	NA	NA	NA	36868091	36873813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36868310_36868440_36868554_36870509
ES.16421.3	chr18	+	1242	8	NNC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.0494633844695	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACTTTGCCTCAGTG	NA	False	NA	49	True	AATAAA	-16	NA	36868102	36875446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36868310_36868440_36868478_36871708_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ES.16421.4	chr18	+	1813	12	NIC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	17.804261724014	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACTTTGCCTCAGTG	NA	False	NA	49	True	AATAAA	-16	NA	36868133	36875446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36868310_36868440_36868554_36870509_36870633_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ES.16421.5	chr18	+	3086	6	NNC	ENSMUSG00000006850.9	novel	1736	9	NA	NA	-16	928	intron_retention	FALSE	canonical	0	0	junction_1	31.8081750498201	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCTGATGCTCTTATCC	NA	False	NA	NA	False	NA	NA	NA	36868178	36873813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36868306_36868440_36868554_36870509_36870633_36870721_36871254_36871414_36871798_36872005
ES.16421.6	chr18	+	2724	6	NIC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	63	junction_1	8.49470423263812	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACTTTGCCTCAGTG	NA	False	NA	49	True	AATAAA	-16	NA	36868193	36875446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36868310_36868440_36868554_36870509_36872395_36874104_36874200_36874714_36874883_36875099
ES.16421.7	chr18	+	1635	9	ISM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	78	2552	4	13	5prime_fragment	FALSE	canonical	3	53	junction_4	7.36545993132812	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAGTGCACTTCTTGT	NA	False	NA	NA	False	AATAAA	-34	NA	36868198	36872898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207
ES.16421.8	chr18	+	1985	12	NNC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.1974609522637	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGCCTCAGTGT	NA	False	NA	50	True	AATAAA	-17	NA	36868215	36875447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36873844_36874200_36874714_36874883_36875099
ES.16421.9	chr18	+	2001	11	NNC	ENSMUSG00000006850.9	novel	1823	12	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	30.2259822007491	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACTTTGCCTCAGTG	NA	False	NA	49	True	AATAAA	-16	NA	36868217	36875446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872188_36872395_36874104_36874200_36874714_36874883_36875099
ES.16422.1	chr18	-	319	1	Intergenic	novelGene_13727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTCCTAATTGCAGG	NA	False	NA	NA	False	NA	NA	NA	36873340	36873021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36873000_36873300
ES.16423.1	chr18	-	590	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	-52	34	-52	-34	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	74	True	TATAAA	-22	NA	36877662	36875418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36875712_36877233_36877341_36877472
ES.16423.4	chr18	-	410	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	27	135	27	-135	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTCCCTTCAGAATGT	NA	False	NA	-27	True	TATAAA	-12	NA	36877583	36875519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36875712_36877233_36877341_36877472
ES.16424.1	chr18	+	1993	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	220.456127882596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877697	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887603_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.10	chr18	+	1463	7	ISM	ENSMUSG00000024474.8	ENSMUST00000235165.2	2349	18	3	6178	3	217	5prime_fragment	FALSE	canonical	3	450	junction_5	75.2041665512401	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCTAGTTCAGTGTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	36877733	36884510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36882338_36882443_36882491_36884156
ES.16424.11	chr18	+	5080	14	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-4	1	intron_retention	FALSE	non_canonical	0	0	junction_8	200.120141429885	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTCTGTGTTGGGCAT	NA	False	NA	7	True	ATTAAA	-17	NA	36877740	36890689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882338_36882443_36882491_36884156_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.12	chr18	+	2185	19	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_13	172.019136532344	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877743	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.15	chr18	+	4134	14	NIC	ENSMUSG00000024474.8	novel	2349	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	450	junction_5	100.647430794053	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877745	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.16	chr18	+	1944	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	256.016088663039	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTCTGTGTTGGG	NA	False	NA	4	True	ATTAAA	-14	NA	36877746	36890686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884325_36885415_36885519_36886314_36886355_36886479_36886713_36887599_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.17	chr18	+	1951	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	220.456127882596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877750	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886726_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.18	chr18	+	1938	20	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.607766669498	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877750	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881225_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889981_36890336_36890372_36890459
ES.16424.19	chr18	+	7968	10	NIC	ENSMUSG00000024474.8	novel	1955	20	NA	NA	4	0	intron_retention	FALSE	canonical	3	450	junction_6	101.093038677922	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877751	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882338_36882443_36888559_36888749_36888808_36889600_36889690_36889874
ES.16424.2	chr18	+	1987	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	8	1	8	-1	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTGTTGGGCATTC	NA	False	NA	9	True	ATTAAA	-19	NA	36877716	36890691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.20	chr18	+	2741	19	NIC	ENSMUSG00000024474.8	novel	1955	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	450	junction_7	91.8077701867694	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877752	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.22	chr18	+	1266	1	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	8	-1739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	36877755	36879021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877800_36879000
ES.16424.23	chr18	+	1926	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	220.456127882596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTCTGTGTTGGG	NA	False	NA	4	True	ATTAAA	-14	NA	36877755	36890686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886713_36887603_36887692_36888491_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.24	chr18	+	2324	18	NIC	ENSMUSG00000024474.8	novel	2349	18	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_12	177.004818811107	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877756	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.26	chr18	+	3449	18	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	2	junction_1	176.772956644086	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTCTGTGTTGGG	NA	False	NA	4	True	ATTAAA	-14	NA	36877764	36890686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877922_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.27	chr18	+	1825	19	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_14	209.869771495693	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTCTGTGTTGGG	NA	False	NA	4	True	ATTAAA	-14	NA	36877764	36890686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36890336_36890372_36890459
ES.16424.28	chr18	+	2014	20	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	214.407926632319	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877766	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877922_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.29	chr18	+	3190	17	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_11	181.695046282913	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877773	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882338_36882443_36882491_36884156_36884321_36885409_36886355_36886479_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.3	chr18	+	2367	17	NNC	ENSMUSG00000024474.8	novel	2349	18	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_10	233.503881124062	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877721	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.31	chr18	+	1925	20	NNC	ENSMUSG00000024474.8	novel	1955	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	168.043095646503	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877774	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887679_36888472_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.32	chr18	+	6123	26	Fusion	ENSMUSG00000024474.8_ENSMUSG00000042660.9	novel	1996	20	NA	NA	4	-2	multi-exon	FALSE	non_canonical	0	0	junction_14	190.465047712172	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGTGCCAAGCTGG	NA	False	NA	2	True	AATAAA	-17	NA	36877778	36896861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ES.16424.33	chr18	+	1703	18	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	263.383165827891	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877783	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884226_36886314_36886355_36886479_36886713_36887603_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.35	chr18	+	2921	18	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_12	176.597581756809	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877803	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882338_36882443_36882491_36884156_36884321_36885409_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.36	chr18	+	1825	18	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	887	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	225.766989535702	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36878699	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36887584_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.37	chr18	+	1641	16	ISM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	3893	4	61	0	3prime_fragment	FALSE	non_canonical	0	0	junction_10	186.914169250666	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36881601	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.38	chr18	+	1615	6	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	6	-89	intron_retention	FALSE	canonical	3	317	junction_1	13.2574507353412	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTAAGCCCAAACCAGG	NA	False	NA	-85	True	AATAAA	-22	NA	36893278	36896774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36896072_36896144
ES.16424.39	chr18	+	1313	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	28	278	28	-278	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATTCTGTGTCA	NA	False	NA	22	True	NA	NA	NA	36893300	36896585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ES.16424.40	chr18	+	3160	4	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	30	-89	intron_retention	FALSE	canonical	3	318	junction_1	11.0252236056942	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTAAGCCCAAACCAGG	NA	False	NA	-85	True	AATAAA	-22	NA	36893302	36896774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36895131_36895218_36895307_36895407_36895588_36895710
ES.16424.41	chr18	+	1691	5	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	42	-100	intron_retention	FALSE	canonical	3	317	junction_1	12.9807549857472	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACCATGTAAG	NA	False	NA	-96	True	AATAAA	-11	NA	36893314	36896763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36896072_36896144
ES.16424.42	chr18	+	1487	7	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	42	-100	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	120.314402943104	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACCATGTAAG	NA	False	NA	-96	True	AATAAA	-11	NA	36893314	36896763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895821_36895901_36896072_36896144
ES.16424.43	chr18	+	1648	5	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	45	-100	intron_retention	FALSE	canonical	3	263	junction_4	29.7689015585056	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACCATGTAAG	NA	False	NA	-96	True	AATAAA	-11	NA	36893317	36896763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36893534_36895029_36895131_36895218_36895588_36895710_36895811_36895901
ES.16424.44	chr18	+	1738	4	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	46	-100	intron_retention	FALSE	canonical	3	317	junction_1	12.9700509722291	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACCATGTAAG	NA	False	NA	-96	True	AATAAA	-11	NA	36893318	36896763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36893534_36895029_36895131_36895218_36895588_36895710
ES.16424.45	chr18	+	1461	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	54	104	54	-104	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGAAAAACAAAAACCATG	NA	False	NA	NA	False	AATAAA	-7	NA	36893326	36896759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ES.16424.46	chr18	+	2500	3	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	817	-100	intron_retention	FALSE	canonical	3	332	junction_1	8.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACCATGTAAG	NA	False	NA	-96	True	AATAAA	-11	NA	36894089	36896763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36895307_36895407_36896072_36896144
ES.16424.5	chr18	+	4137	17	NIC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-8	1	intron_retention	FALSE	canonical	3	450	junction_6	97.0334993700629	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTCTGTGTTGGGCAT	NA	False	NA	7	True	ATTAAA	-17	NA	36877722	36890689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36877842_36878663_36878731_36880400_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.6	chr18	+	1984	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	220.456127882596	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877724	36890688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.7	chr18	+	1963	20	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	213.588856090348	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTCTGTGTTGGG	NA	False	NA	4	True	ATTAAA	-14	NA	36877729	36890686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882332_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16424.8	chr18	+	2038	19	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	254.172616809527	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTCTTTTCTGTGTTGG	NA	False	NA	3	True	ATTAAA	-13	NA	36877732	36890685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36877922_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886718_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ES.16425.1	chr18	+	3455	11	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-21	179	intron_retention	FALSE	canonical	3	111	junction_7	15.0983442800858	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916262	36924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36922338_36922419_36923304_36923521_36923669_36924122
ES.16425.10	chr18	+	2497	13	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	17	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.9123398517804	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGTTCATTTCCTAG	NA	False	NA	16	True	NA	NA	NA	36916300	36924929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919347_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.11	chr18	+	2866	12	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	17	177	intron_retention	FALSE	canonical	2	2	junction_4	38.0226118022482	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGACCTGAGTTCATTT	NA	False	NA	11	True	NA	NA	NA	36916300	36924924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920364_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.12	chr18	+	4552	9	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-18	-22	intron_retention	FALSE	canonical	3	112	junction_4	16.3051947243816	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36916303	36925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36922338_36922419_36923304_36923521_36923669_36924122
ES.16425.13	chr18	+	2162	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	20	-180	-18	180	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTGAGTTCATTTCCT	NA	False	NA	14	True	NA	NA	NA	36916303	36924927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
ES.16425.14	chr18	+	3252	11	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-18	-22	intron_retention	FALSE	non_canonical	0	0	junction_3	57.5333816145027	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36916303	36925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919161_36919260_36920552_36921060_36921218_36921318_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.15	chr18	+	3496	10	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-18	179	intron_retention	FALSE	canonical	3	111	junction_7	15.5062711328173	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916303	36924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36923304_36923521_36923669_36924122
ES.16425.16	chr18	+	2419	13	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-17	178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.4419967492469	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916304	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920358_36920502_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.17	chr18	+	3932	12	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-17	180	intron_retention	FALSE	non_canonical	0	0	junction_4	38.5355905045867	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCTGAGTTCATTTCCT	NA	False	NA	14	True	NA	NA	NA	36916304	36924927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919548_36919585_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.18	chr18	+	2168	12	NNC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-17	176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	55.9014776782472	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGACCTGAGTTCATT	NA	False	NA	10	True	NA	NA	NA	36916304	36924923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920364_36920502_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
ES.16425.19	chr18	+	3966	8	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-17	179	intron_retention	FALSE	canonical	3	112	junction_4	16.7575751984173	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGAGTTCATTTCC	NA	False	NA	13	True	NA	NA	NA	36916304	36924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36923304_36923521_36923669_36924122
ES.16425.2	chr18	+	3799	9	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-15	176	intron_retention	FALSE	canonical	3	111	junction_6	15.9838785968863	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGACCTGAGTTCATT	NA	False	NA	10	True	NA	NA	NA	36916268	36924923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36923304_36923521_36923669_36924122
ES.16425.20	chr18	+	2741	12	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-15	178	intron_retention	FALSE	canonical	0	0	junction_10	38.4669010883232	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916306	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923374_36923521_36923669_36924122
ES.16425.21	chr18	+	2739	13	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-15	172	intron_retention	FALSE	canonical	0	0	junction_11	47.1298442838741	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCAGAGGACCTGAGTT	NA	False	NA	6	True	NA	NA	NA	36916306	36924919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36923809_36923884_36924122
ES.16425.22	chr18	+	3643	9	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-9	176	intron_retention	FALSE	canonical	3	111	junction_6	16.3993140100432	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGACCTGAGTTCATT	NA	False	NA	10	True	NA	NA	NA	36916312	36924923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921318_36921629_36923304_36923521_36923669_36924122
ES.16425.23	chr18	+	5828	8	NNC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-8	178	intron_retention	FALSE	canonical	0	0	junction_6	42.6207767672634	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916313	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36923306_36923521_36923669_36924122
ES.16425.24	chr18	+	2016	11	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-8	172	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	38.9821754138991	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCAGAGGACCTGAGTT	NA	False	NA	6	True	NA	NA	NA	36916313	36924919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36923186_36923304_36923521_36923669_36924122
ES.16425.25	chr18	+	3672	10	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	-6	178	intron_retention	FALSE	canonical	3	111	junction_6	15.583308575936	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916315	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36922338_36922419_36923304_36923521_36923669_36924122
ES.16425.26	chr18	+	4436	9	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	7	5	intron_retention	FALSE	canonical	3	111	junction_6	15.9838785968863	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTTTGCCTGACGCTAC	NA	False	NA	NA	False	NA	NA	NA	36916328	36925620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36923304_36923521_36923669_36924122
ES.16425.28	chr18	+	2636	6	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-271	-96	intron_retention	FALSE	canonical	3	111	junction_3	5.31413210223457	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGAGCATCTGTTG	289	False	NA	NA	False	AAAAAG	-17	NA	36920601	36924651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36920681_36920951_36921060_36921218_36921318_36921629_36923304_36923521_36923669_36924122
ES.16425.29	chr18	+	1533	6	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	5567	691	755	177	3prime_fragment	FALSE	canonical	3	88	junction_3	12.6079340099796	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGACCTGAGTTCATTT	1315	False	NA	11	True	NA	NA	NA	36921627	36924924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.3	chr18	+	2460	11	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-9	178	intron_retention	FALSE	canonical	3	6	junction_8	38.1502293571087	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916274	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
ES.16425.30	chr18	+	3065	2	ISM	ENSMUSG00000019143.16	ENSMUST00000124204.2	769	3	-1423	-419	770	178	intron_retention	FALSE	canonical	3	117	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	1330	False	NA	12	True	NA	NA	NA	36921642	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_36923304_36923521
ES.16425.4	chr18	+	2436	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	214	686	-9	182	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGTTCATTTCCTAG	NA	False	NA	16	True	NA	NA	NA	36916274	36924929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.5	chr18	+	4213	7	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	-5	182	intron_retention	FALSE	canonical	3	112	junction_4	17.7012240631357	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGTTCATTTCCTAG	NA	False	NA	16	True	NA	NA	NA	36916278	36924929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36923669_36924122
ES.16425.6	chr18	+	2418	10	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	6	177	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	41.8359524043644	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGACCTGAGTTCATTT	NA	False	NA	11	True	NA	NA	NA	36916289	36924924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920833_36922058_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.7	chr18	+	3376	12	NNC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	11	5	intron_retention	FALSE	canonical	0	0	junction_10	38.4669010883232	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTTTGCCTGACGCTAC	NA	False	NA	NA	False	NA	NA	NA	36916294	36925620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923306_36923525_36923669_36924122
ES.16425.8	chr18	+	3103	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	238	-5	15	5	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTTTGCCTGACGCTAC	NA	False	NA	NA	False	NA	NA	NA	36916298	36925620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ES.16425.9	chr18	+	2777	8	NIC	ENSMUSG00000019143.16	novel	2002	12	NA	NA	17	178	intron_retention	FALSE	canonical	2	3	junction_5	46.449445856847	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGAGTTCATTTC	NA	False	NA	12	True	NA	NA	NA	36916300	36924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921724_36923186_36923304_36923521_36923669_36924122
ES.16426.1	chr18	-	779	1	Intergenic	novelGene_13728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAAAAAAAAAACCAAT	NA	False	NA	NA	False	NA	NA	NA	36883347	36882568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36882600_36883300
ES.16427.1	chr18	-	4197	14	Fusion	ENSMUSG00000044595.11_ENSMUSG00000001380.8	novel	1989	13	NA	NA	38	-1	intron_retention	FALSE	canonical	3	52	junction_1	176.361751679953	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTCTGCTTGGTA	NA	False	NA	-9	True	ATTAAA	-13	NA	36916220	36896726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36897541_36898148_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ES.16427.11	chr18	-	1936	13	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	253.068611689048	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTGTCTGTGTCCTTG	NA	False	NA	-6	True	AATAAA	-12	NA	36916220	36899584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903947_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915817_36916063
ES.16427.13	chr18	-	1801	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	32	156	32	6	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCAGGTACTACACT	NA	False	NA	41	True	NA	NA	NA	36916226	36899736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ES.16427.14	chr18	-	2666	11	NIC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	-33	6	intron_retention	FALSE	canonical	3	550	junction_6	69.651202430396	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCAGGTACTACACT	NA	False	NA	41	True	NA	NA	NA	36916208	36899736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_36900007_36900242_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ES.16427.2	chr18	-	2351	5	Fusion	ENSMUSG00000044595.11_ENSMUSG00000001380.8	novel	1451	4	NA	NA	-1121	-1	multi-exon	TRUE	canonical	3	43	junction_2	285.723095846311	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTCTGCTTGGTA	NA	False	NA	-9	True	ATTAAA	-13	NA	36900388	36896726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195_36900007_36900242
ES.16427.3	chr18	-	1818	3	FSM	ENSMUSG00000044595.11	ENSMUST00000155827.2	1804	3	-17	3	-17	-1	multi-exon	FALSE	canonical	3	52	junction_1	5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTGTCTGCTTGGTA	NA	False	NA	-9	True	ATTAAA	-13	NA	36899284	36896726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36897541_36898148_36899064_36899195
ES.16427.4	chr18	-	2009	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	-22	2	-22	-2	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTCTGTGTCCTTGAT	NA	False	NA	-4	True	AATAAA	-14	NA	36916280	36899582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ES.16427.6	chr18	-	1318	8	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.407671541618	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTCTGTGTCCTTGAT	NA	False	NA	-4	True	AATAAA	-14	NA	36916204	36899582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903886_36915732_36915823_36916063
ES.16427.7	chr18	-	1897	13	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	190.619804118623	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTCTGTGTCCTTGAT	NA	False	NA	-4	True	AATAAA	-14	NA	36916148	36899582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915843_36916063
ES.16427.9	chr18	-	1162	6	NNC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	291.257274587262	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGTCTGTGTCCTTGA	NA	False	NA	-5	True	AATAAA	-13	NA	36916233	36899583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903350_36915732_36915823_36916063
ES.16428.1	chr18	-	177	1	Intergenic	novelGene_13729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGTTGAA	NA	False	NA	NA	False	NA	NA	NA	36918368	36918191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36918200_36918400
ES.16429.1	chr18	+	892	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	33	1385	33	198	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCTTTCCCCATATCC	6649	False	NA	28	True	AATAAA	-19	NA	36926961	36931334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.16429.10	chr18	+	1449	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	63	798	63	785	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTTTGGTGACAAG	6679	False	NA	17	True	AGTAAA	-21	NA	36926991	36931921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.16429.2	chr18	+	1285	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	33	992	33	591	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGTTTCTTCTGTTTCA	6649	False	NA	30	True	ATTAAA	-27	NA	36926961	36931727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.16429.3	chr18	+	2255	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	45	10	45	-10	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTGCCACAGTGACT	6661	False	NA	12	True	AATAAA	-12	NA	36926973	36932709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.16429.5	chr18	+	1491	6	NNC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	52	590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	286.191264716448	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCGTTTCTTCTGTTTC	6668	False	NA	29	True	ATTAAA	-26	NA	36926980	36931726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_36927013_36927123_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.16429.6	chr18	+	2780	4	NIC	ENSMUSG00000001383.10	novel	2310	6	NA	NA	52	583	intron_retention	FALSE	canonical	3	554	junction_3	89.3843138115159	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTAACCTCGTTTCTT	6668	False	NA	22	True	ATTAAA	-19	NA	36926980	36931719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_36927013_36927349_36929164_36929551_36929698_36930931
ES.16429.7	chr18	+	1846	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	57	407	57	-407	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGACAGGTCTTTTT	6673	False	NA	NA	False	NA	NA	NA	36926985	36932312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ES.1643.1	chr1	-	179	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	155382194	155382015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155382000_155382200
ES.16430.1	chr18	+	247	1	FSM	ENSMUSG00002074846.1	ENSMUST00020181660.1	143	1	0	-104	0	104	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAATTGGGGGTGGA	4756	False	NA	NA	False	AATAAA	-37	NA	36934918	36935165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_36934900_36935200
ES.16431.1	chr18	-	3088	1	Intergenic	novelGene_13730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTGAA	NA	False	NA	NA	False	AATATA	-18	NA	36938893	36935805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_36935800_36938900
ES.16432.1	chr18	+	178	1	Intergenic	novelGene_13731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGAGTAGT	378	False	NA	NA	False	NA	NA	NA	36968012	36968190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_36968000_36968200
ES.16433.1	chr18	+	5366	4	FSM	ENSMUSG00000103310.2	ENSMUST00000047614.4	5335	4	-35	4	-35	-4	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAAGCAATGGTGGTC	9119	False	NA	NA	False	AATAAA	-12	NA	37153166	37320706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37155677_37289207_37289267_37292317_37292407_37317998
ES.16433.2	chr18	+	5873	4	FSM	ENSMUSG00000102697.2	ENSMUST00000047479.3	5888	4	19	-4	19	4	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGGTGGTCATTTCTAA	NA	False	NA	NA	False	AATAAA	-20	NA	37276574	37320714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37279584_37289207_37289267_37292317_37292407_37317998
ES.16433.3	chr18	+	1987	1	NIC	ENSMUSG00000103442.6	novel	4925	5	NA	NA	254879	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGACATTTTAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	37318216	37320203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_37318200_37320200
ES.16434.1	chr18	+	175	1	Intergenic	novelGene_13732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCATCTGGTTTTAC	4451	False	NA	NA	False	NA	NA	NA	37324838	37325013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37324800_37325000
ES.16435.1	chr18	+	1373	1	Intergenic	novelGene_13733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTCTGTTTCGTCGC	3171	False	NA	NA	False	NA	NA	NA	37688430	37689803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37688400_37689800
ES.16436.1	chr18	+	4054	1	Intergenic	novelGene_13734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATCAATTGTGCTGGCTG	414	False	NA	NA	False	NA	NA	NA	37737341	37741395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37737300_37741400
ES.16437.1	chr18	-	623	1	Antisense	novelGene_ENSMUSG00000104225.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37753041	37752418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_37752400_37753000
ES.16438.1	chr18	+	5852	1	Intergenic	novelGene_13735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGCTTACTTTATTGC	759	False	NA	NA	False	AAAAAG	-34	NA	37756501	37762353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37756500_37762400
ES.16439.1	chr18	+	3531	2	Antisense	novelGene_ENSMUSG00000051316.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACGAAAGTGCTCC	4846	False	NA	NA	False	NA	NA	NA	37773261	37777204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_37776585_37776996
ES.1644.10	chr1	+	1039	5	NNC	ENSMUSG00000033701.14	novel	993	4	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	172.790877942095	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	13	True	NA	NA	NA	155433901	155448032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155434606_155440402_155440468_155443330_155443428_155446851_155446936_155447943
ES.1644.11	chr1	+	1417	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	77	4098	73	137	multi-exon	FALSE	canonical	3	134	junction_7	98.5478232605254	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGACGTCTCAGCAACT	NA	False	NA	28	True	AATAAA	-20	NA	155433944	155562978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ES.1644.12	chr1	+	737	4	NNC	ENSMUSG00000033701.14	novel	993	4	NA	NA	238	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	142.647194932891	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	13	True	NA	NA	NA	155434109	155448032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155434596_155440402_155440468_155443330_155443428_155447943
ES.1644.13	chr1	+	3009	4	NNC	ENSMUSG00000033701.14	novel	993	4	NA	NA	563	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	144.891530309938	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	14	True	NA	NA	NA	155434434	155448033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155434606_155440402_155440468_155440744_155443428_155447943
ES.1644.14	chr1	+	350	4	NNC	ENSMUSG00000033701.14	novel	496	2	NA	NA	-1192	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.65498873282	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTTTT	NA	False	NA	17	True	NA	NA	NA	155441801	155448036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155441906_155442474_155442531_155443330_155443428_155447943
ES.1644.15	chr1	+	166	1	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	155444501	155444667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155444500_155444700
ES.1644.16	chr1	+	5198	1	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155557001	155562199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155557000_155562200
ES.1644.17	chr1	+	1831	1	ISM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	129709	1669	840	1290	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACAGAGAAGGCGTAG	5052	False	NA	NA	False	AATAAA	-20	NA	155563576	155565407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_155563600_155565400
ES.1644.2	chr1	+	3854	3	NIC	ENSMUSG00000033701.14	novel	993	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	223	junction_2	65	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	14	True	NA	NA	NA	155433866	155448033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155434606_155440402_155443428_155447943
ES.1644.3	chr1	+	991	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	1	1	1	-1	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	14	True	NA	NA	NA	155433866	155448033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
ES.1644.4	chr1	+	1013	4	NNC	ENSMUSG00000033701.14	novel	993	4	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	144.891530309938	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	14	True	NA	NA	NA	155433870	155448033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155434606_155440402_155440468_155443304_155443428_155447943
ES.1644.5	chr1	+	1591	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	4	3997	0	238	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTTTGAAATTTAT	NA	False	NA	1	True	AATATA	-14	NA	155433871	155563079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ES.1644.7	chr1	+	2996	7	NIC	ENSMUSG00000033701.14	novel	5592	8	NA	NA	10	483	intron_retention	FALSE	canonical	0	0	junction_4	129.622100310437	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATGGTTAATTTCATT	NA	False	NA	NA	False	CATAAA	-15	NA	155433881	155564600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155500614_155500705_155552949_155552981_155562694
ES.1644.8	chr1	+	1180	6	NNC	ENSMUSG00000033701.14	novel	993	4	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	146.332498099363	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	14	True	NA	NA	NA	155433883	155448033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155434606_155440402_155440468_155440744_155440895_155442474_155442531_155443330_155443428_155447943
ES.1644.9	chr1	+	1229	4	FSM	ENSMUSG00000033701.14	ENSMUST00000097529.5	1255	4	28	-2	28	2	multi-exon	FALSE	canonical	3	9	junction_3	164.081280671095	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCGGAGATAAGTGTTAT	NA	False	NA	8	True	NA	NA	NA	155433899	155463546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155463185
ES.16440.1	chr18	-	6404	2	FSM	ENSMUSG00000050304.5_ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	34	-3136	34	23	multi-exon	FALSE	canonical	3	1260	junction_1	0	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTAGTACTCTGTTTAC	NA	False	NA	NA	False	CATAAA	-41	NA	37777223	37770407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.10	chr18	-	1548	3	NNC	ENSMUSG00000051316.9	novel	3302	2	NA	NA	37	-1531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	630	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777220	37775074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37776359_37776544_37776586_37776997
ES.16440.11	chr18	-	1761	2	NNC	ENSMUSG00000051316.9	novel	3302	2	NA	NA	1	-1533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGATGTTGTTCTATGA	NA	False	NA	-4	True	AATAAA	-19	NA	37777256	37775076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37776586_37777004
ES.16440.2	chr18	-	3571	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	33	-302	33	302	multi-exon	FALSE	canonical	3	1260	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAAGATCTTTATCCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	37777224	37773241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.3	chr18	-	3306	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	3	-7	3	7	multi-exon	FALSE	canonical	3	1260	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTTTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	37777254	37773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.4	chr18	-	3068	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	3	231	3	-231	multi-exon	FALSE	canonical	3	1260	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATGGGTTCAAGGGCA	NA	False	NA	NA	False	TATAAA	-6	NA	37777254	37773774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.5	chr18	-	2658	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	20	624	20	-624	multi-exon	FALSE	canonical	3	1260	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTTTTATTTTTG	NA	False	NA	NA	False	ATTAAA	-29	NA	37777237	37774167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.6	chr18	-	2307	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	-69	1064	-69	-1064	multi-exon	FALSE	canonical	3	1260	junction_1	0	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGTTTTTTTAAAT	NA	False	NA	NA	False	TTTAAA	-21	NA	37777326	37774607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.7	chr18	-	1822	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	-50	1530	-50	-1530	multi-exon	FALSE	canonical	3	1260	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTTGTTCTATGAATA	NA	False	NA	-1	True	AATAAA	-22	NA	37777307	37775073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_37776586_37776997
ES.16440.8	chr18	-	2193	1	Genic_Genomic	ENSMUSG00000051316.9	novel	NA	NA	NA	NA	-10	-1531	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777267	37775074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_37775100_37777300
ES.16440.9	chr18	-	1644	3	NNC	ENSMUSG00000051316.9	novel	3302	2	NA	NA	3	-1531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	630	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777254	37775074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37775199_37775322_37776586_37776997
ES.16441.1	chr18	+	3325	1	FSM	ENSMUSG00000073590.4	ENSMUST00000097608.3	2831	1	-9	-485	-9	485	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATATATTTACAAGAAAA	NA	False	NA	NA	False	AGTAAA	-23	NA	37788950	37792275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37789000_37792300
ES.16441.2	chr18	+	2836	1	FSM	ENSMUSG00000073590.4	ENSMUST00000097608.3	2831	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATATTTTAAATATAA	NA	False	NA	NA	False	AATAAA	-17	NA	37788957	37791793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37789000_37791800
ES.16441.3	chr18	+	1372	2	Genic_Genomic	ENSMUSG00000073590.4	novel	6292	1	NA	NA	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGTATATTTTAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	37788962	37791790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_37789583_37791038
ES.16442.1	chr18	+	5143	3	NNC	ENSMUSG00000103144.2	novel	4692	4	NA	NA	-16	2882	intron_retention	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTATAATACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	37794829	37800974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37798338_37799252_37800536_37800622
ES.16442.2	chr18	+	4559	1	FSM	ENSMUSG00000103144.2	ENSMUST00000194888.2	3247	1	-16	-1296	-16	1296	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTTAGCTCTTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	37794829	37799388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37794800_37799400
ES.16442.3	chr18	+	5766	1	FSM	ENSMUSG00000103144.2	ENSMUST00000194888.2	3247	1	361	-2880	361	2880	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGTTATAATACTTTT	NA	False	NA	NA	False	NA	NA	NA	37795206	37800972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37795200_37801000
ES.16442.4	chr18	+	4090	2	NNC	ENSMUSG00000103144.2	novel	4692	4	NA	NA	1118	2876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAATCTGGTTATAATAC	NA	False	NA	NA	False	NA	NA	NA	37795963	37800968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37798338_37799252
ES.16442.5	chr18	+	2137	2	NNC	ENSMUSG00000103144.2	novel	4692	4	NA	NA	1492	1297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTAGCTCTTATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	37796337	37799389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37798338_37799252
ES.16443.1	chr18	+	4399	1	Genic_Genomic	ENSMUSG00000103332.2	novel	NA	NA	NA	NA	-24	-168543	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-39	NA	37801981	37806380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_37802000_37806400
ES.16443.2	chr18	+	3060	1	NIC	ENSMUSG00000103332.2	novel	4689	4	NA	NA	135	-169723	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATCTGAATATTTCTC	NA	False	NA	NA	False	TATAAA	-24	NA	37802140	37805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_37802100_37805200
ES.16443.3	chr18	+	1412	1	NIC	ENSMUSG00000103332.2	novel	4689	4	NA	NA	1263	-170243	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTGAAAGTGTATTGA	NA	False	NA	NA	False	AATATA	-18	NA	37803268	37804680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_37803300_37804700
ES.16444.1	chr18	+	3200	1	Genic_Genomic	ENSMUSG00000104346.2	novel	NA	NA	NA	NA	-500	-164867	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTTTTCTCTACCC	366	False	NA	NA	False	AGTAAA	-17	NA	37806859	37810059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_37806900_37810100
ES.16445.1	chr18	+	2640	1	NIC	ENSMUSG00000103677.2	novel	4727	4	NA	NA	28	98	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTCCAGTTGTATG	2835	False	NA	NA	False	ATTAAA	-21	NA	37818290	37820930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_37818300_37820900
ES.16446.1	chr18	+	8128	1	FSM	ENSMUSG00000102748.2	ENSMUST00000193631.2	2756	1	1276	-6648	1276	6648	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGATAGACTTTACAT	67	False	NA	NA	False	AATAAA	-21	NA	37824163	37832291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37824200_37832300
ES.16447.1	chr18	+	217	1	Intergenic	novelGene_13736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTGTTTTTG	NA	False	NA	33	True	NA	NA	NA	37845135	37845352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37845100_37845400
ES.16448.1	chr18	+	4715	4	FSM	ENSMUSG00000103472.2	ENSMUST00000192511.2	4730	4	18	-3	18	3	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGCGTCTGTTTAAGAG	NA	False	NA	20	True	AATAAA	-23	NA	37847834	37974929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37850428_37958073_37958133_37966317_37966407_37972955
ES.16448.10	chr18	+	2293	4	NNC	ENSMUSG00000103081.4	novel	4615	4	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.659508966721	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	3890	False	NA	14	True	AATAAA	-17	NA	37894801	37974923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37894976_37958073_37958133_37966314_37966407_37972955
ES.16448.11	chr18	+	3075	4	NNC	ENSMUSG00000103081.4	novel	4615	4	NA	NA	1541	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	106.365198987054	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGACCGCGTCTG	5483	False	NA	12	True	AATAAA	-15	NA	37896394	37974921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37897353_37958073_37958133_37966314_37966407_37972955
ES.16448.12	chr18	+	4214	1	FSM	ENSMUSG00000102428.2	ENSMUST00000193045.2	4352	1	139	-1	139	1	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATCAAAACAACTAAACA	8053	False	NA	NA	False	NA	NA	NA	37898964	37903178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37899000_37903200
ES.16448.13	chr18	+	4714	4	NNC	ENSMUSG00000102428.2	novel	5080	4	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	94.3551211587844	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	8081	False	NA	17	True	AATAAA	-20	NA	37898992	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37901594_37958073_37958124_37966314_37966407_37972955
ES.16448.14	chr18	+	4365	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	715	0	522	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	8436	False	NA	17	True	AATAAA	-20	NA	37899347	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
ES.16448.15	chr18	+	4108	1	Intergenic	novelGene_13739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGATAGGGAAATTTCAC	NA	False	NA	NA	False	TTTAAA	-38	NA	37934591	37938699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37934600_37938700
ES.16448.17	chr18	+	4750	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	-62	-1	-16	1	multi-exon	FALSE	canonical	3	36	junction_1	87.788888185743	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCGCGTCTGTTTAAG	NA	False	NA	18	True	AATAAA	-21	NA	37939400	37974927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
ES.16448.18	chr18	+	2317	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	False	NA	14	True	AATAAA	-17	NA	37939429	37974923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
ES.16448.19	chr18	+	4016	4	NNC	ENSMUSG00000102918.2	novel	4687	4	NA	NA	-17	-5	intron_retention	FALSE	canonical	0	0	junction_1	104.703815063678	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGACCGCGTCTG	NA	False	NA	12	True	AATAAA	-15	NA	37939445	37974921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37941348_37958073_37958133_37966317_37966407_37972955
ES.16448.2	chr18	+	10282	1	FSM	ENSMUSG00000103749.2	ENSMUST00000193006.2	4569	1	-5334	-379	-5289	379	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTATGTGGTAATC	NA	False	NA	NA	False	ATTAAA	-12	NA	37858772	37869054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37858800_37869100
ES.16448.20	chr18	+	3345	1	FSM	ENSMUSG00000023036.15	ENSMUST00000193222.2	3100	1	-216	-29	161	29	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGAGCCCATGGAACT	NA	False	NA	NA	False	NA	NA	NA	37948292	37951637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37948300_37951600
ES.16448.21	chr18	+	4431	4	FSM	ENSMUSG00000102543.6	ENSMUST00000055935.11	4741	4	307	3	166	-3	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	False	NA	14	True	AATAAA	-17	NA	37952872	37974923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37955188_37958073_37958133_37966317_37966407_37972955
ES.16448.22	chr18	+	2185	3	FSM	ENSMUSG00000102543.6	ENSMUST00000192875.2	5777	3	5298	-1706	5298	-3	multi-exon	FALSE	canonical	3	212	junction_1	9.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	2315	False	NA	14	True	AATAAA	-17	NA	37958004	37974923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37958133_37966317_37966407_37972955
ES.16448.23	chr18	+	149	1	Intergenic	novelGene_13740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37970234	37970383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_37970200_37970400
ES.16448.3	chr18	+	4704	4	FSM	ENSMUSG00000103897.2	ENSMUST00000066149.9	4730	4	21	5	21	-5	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGACCGCGTCTG	NA	False	NA	12	True	AATAAA	-15	NA	37858779	37974921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37861370_37958073_37958133_37966317_37966407_37972955
ES.16448.4	chr18	+	3399	1	FSM	ENSMUSG00000103749.2	ENSMUST00000193006.2	4569	1	100	1070	100	-1070	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATTTGTTCTGGTTC	NA	False	NA	NA	False	NA	NA	NA	37864206	37867605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37864200_37867600
ES.16448.5	chr18	+	4732	4	FSM	ENSMUSG00000102222.2	ENSMUST00000193404.2	4732	4	-3	3	-3	-3	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	5494	False	NA	14	True	AATAAA	-17	NA	37880042	37974923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37882659_37958073_37958133_37966317_37966407_37972955
ES.16448.6	chr18	+	4728	4	FSM	ENSMUSG00000104063.2	ENSMUST00000194928.2	4713	4	-15	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37884637	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37887247_37958073_37958133_37966317_37966407_37972955
ES.16448.7	chr18	+	4472	5	NNC	ENSMUSG00000102742.2	novel	4756	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.476881121084	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37888786	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_37889256_37889536_37891421_37958073_37958133_37966317_37966407_37972955
ES.16448.8	chr18	+	4732	4	FSM	ENSMUSG00000102742.2	ENSMUST00000061279.10	4756	4	24	0	24	0	multi-exon	FALSE	canonical	1	6	junction_1	101.88337559299	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37888807	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37891421_37958073_37958133_37966317_37966407_37972955
ES.16448.9	chr18	+	4699	4	FSM	ENSMUSG00000103081.4	ENSMUST00000195764.2	4615	4	-81	-3	-81	3	multi-exon	FALSE	canonical	3	10	junction_1	100.00333327778	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	3861	False	NA	17	True	AATAAA	-20	NA	37894772	37974926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_37897353_37958073_37958133_37966317_37966407_37972955
ES.16449.1	chr18	-	1405	1	Genic_Genomic	ENSMUSG00000104512.2	novel	NA	NA	NA	NA	-527	-10965	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGTCGTTGCTTTCA	4813	False	NA	NA	False	TTTAAA	-21	NA	37859701	37858296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_37858300_37859700
ES.1645.1	chr1	-	194	1	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAACAAT	NA	False	NA	NA	False	NA	NA	NA	155445971	155445777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155445800_155446000
ES.16450.1	chr18	-	3467	3	NNC	ENSMUSG00000097330.3	novel	2685	3	NA	NA	609	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAACTGGTATTTACTT	NA	False	NA	NA	False	AATAAA	-14	NA	37899985	37885351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37885952_37897007_37897130_37897240
ES.16450.2	chr18	-	3203	1	Genic_Genomic	ENSMUSG00000097330.3	novel	NA	NA	NA	NA	-7	-10229	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAATATCACTACCAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	37901302	37898099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_37898100_37901300
ES.16451.1	chr18	-	140	1	Intergenic	novelGene_13737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37908999	37908859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_37908900_37909000
ES.16452.1	chr18	-	175	1	Intergenic	novelGene_13738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACCAAAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	37925320	37925145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_37925100_37925300
ES.16453.1	chr18	+	159	1	Intergenic	novelGene_13744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	38008239	38008398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38008200_38008400
ES.16454.1	chr18	+	3850	1	Intergenic	novelGene_13745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAAAAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	38017188	38021038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38017200_38021000
ES.16455.1	chr18	+	176	1	Intergenic	novelGene_13746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATAGACAAG	NA	False	NA	NA	False	NA	NA	NA	38055390	38055566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38055400_38055600
ES.16456.1	chr18	-	5666	27	NNC	ENSMUSG00000024456.17	novel	5741	29	NA	NA	-22	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.3577930845813	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGCCTCCTTTGTAAA	NA	False	NA	-16	True	AATAAA	-19	NA	38068498	37976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ES.16456.12	chr18	-	2175	3	NNC	ENSMUSG00000024456.17	novel	584	3	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	680	False	NA	-28	True	AATAAA	-7	NA	37986492	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978613_37984603_37984691_37986355
ES.16456.13	chr18	-	2562	7	NNC	ENSMUSG00000024456.17	novel	5416	26	NA	NA	399	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.1211519005161	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	9944	False	NA	-28	True	AATAAA	-7	NA	37988798	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978545_37984603_37984691_37986355_37986492_37986596_37986763_37987530_37987658_37988526_37988657_37988765
ES.16456.14	chr18	-	3519	12	NNC	ENSMUSG00000024456.17	novel	5416	26	NA	NA	7050	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.0747840652132	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	NA	False	NA	-28	True	AATAAA	-7	NA	38023945	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986485_37986679_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529
ES.16456.15	chr18	-	6419	26	NIC	ENSMUSG00000024456.17	novel	5741	29	NA	NA	-16	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	19.0458814445538	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	NA	False	NA	-28	True	AATAAA	-7	NA	38068492	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ES.16456.16	chr18	-	5613	27	NNC	ENSMUSG00000024456.17	novel	5741	29	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.570396888204	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	NA	False	NA	-28	True	AATAAA	-7	NA	38068466	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029422_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ES.16456.18	chr18	-	3189	11	NNC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	8129	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.4071848559558	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCTCCCTCTAGC	NA	False	NA	-28	True	AATAAA	-7	NA	38022866	37976661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022746
ES.16456.19	chr18	-	2165	9	NNC	ENSMUSG00000024456.17	novel	5416	26	NA	NA	-347	466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.1662062579967	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGGTCGGTCAGTC	9984	False	NA	NA	False	AATAAA	-26	NA	37989544	37977410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505
ES.16456.20	chr18	-	180	1	Intergenic	novelGene_13741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTACAATTAT	6562	False	NA	NA	False	NA	NA	NA	37992966	37992786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_37992800_37993000
ES.16456.21	chr18	-	1618	1	Intergenic	novelGene_13742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAAAAAAAAGGAAAA	927	False	NA	NA	False	NA	NA	NA	37998601	37996983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_37997000_37998600
ES.16456.22	chr18	-	6030	1	Intergenic	novelGene_13743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGCAAAGATATGTTT	NA	False	NA	NA	False	NA	NA	NA	38006002	37999972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_3.8e+07_38006000
ES.16456.23	chr18	-	2755	10	NNC	ENSMUSG00000024456.17	novel	5596	28	NA	NA	60	303	intron_retention	FALSE	canonical	0	0	junction_1	16.3782451312785	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	38068374	38028906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38029315_38029413_38029525_38030546_38030656_38033697_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ES.16456.24	chr18	-	3788	2	ISM	ENSMUSG00000024456.17	ENSMUST00000129688.2	617	3	-1847	-302	-1847	302	intron_retention	FALSE	canonical	3	50	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38032842	38028907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_38029267_38029413
ES.16456.25	chr18	-	5680	1	Intergenic	novelGene_13747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38062824	38057144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38057100_38062800
ES.16456.26	chr18	-	3274	1	NIC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	-16	-36009	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAAGAGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38068492	38065218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38065200_38068500
ES.16456.3	chr18	-	3945	15	NNC	ENSMUSG00000024456.17	novel	5416	26	NA	NA	3793	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.9838128701737	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	-20	True	AATAAA	-15	NA	38027202	37976653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024015_38024887_38025026_38026402_38026468_38027146
ES.16456.6	chr18	-	5597	26	NNC	ENSMUSG00000024456.17	novel	4378	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.9397911436169	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	-20	True	AATAAA	-15	NA	38068460	37976653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986760_37987530_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38068254
ES.16456.7	chr18	-	5539	1	NIC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	4266	0	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCCTCTAGCCTCCTT	4978	False	NA	-22	True	AATAAA	-13	NA	37982194	37976655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_37976700_37982200
ES.16457.1	chr18	+	4205	1	Intergenic	novelGene_13748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38081125	38085330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38081100_38085300
ES.16458.1	chr18	-	2034	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	-2	0	-2	0	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088071	38070024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.10	chr18	-	2537	13	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-11	-7	intron_retention	FALSE	canonical	2	9	junction_5	160.192332317541	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088038	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074820_38074930_38075021_38076508_38076574_38076730_38076831_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.11	chr18	-	1970	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	201.858760482852	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088035	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074157_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085537_38085667_38087734_38087818_38087911
ES.16458.12	chr18	-	2381	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	21	-7	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088048	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.13	chr18	-	2019	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	148.523549977635	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088037	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076831_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.14	chr18	-	1967	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.754107806083	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088035	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074488_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.15	chr18	-	3145	12	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	500	junction_2	39.1310576067334	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088036	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734
ES.16458.16	chr18	-	2823	11	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-6	-9	intron_retention	FALSE	canonical	1	2	junction_9	233.032529918035	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCAGTACTTTATTAGT	NA	False	NA	-14	True	AATAAA	-12	NA	38088033	38070033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38087734_38087818_38087911
ES.16458.17	chr18	-	6990	9	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	500	junction_1	37.8475560637672	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCAGTACTTTATTAGT	NA	False	NA	-14	True	AATAAA	-12	NA	38088030	38070033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.18	chr18	-	3642	10	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-7	-92	intron_retention	FALSE	canonical	3	500	junction_2	42.29467467865	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGATTTTAATTCTTGCT	NA	False	NA	8	True	AATAAA	-33	NA	38088034	38070116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.19	chr18	-	1956	16	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	1	-100	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	194.003046940563	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088026	38070124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077020_38077088_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.2	chr18	-	1777	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	214.197727968031	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088037	38070024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38087734_38087818_38087911
ES.16458.20	chr18	-	1877	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	7	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	150.503373072242	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088020	38070124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085529_38085667_38087734_38087818_38087911
ES.16458.21	chr18	-	4022	8	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-1	-100	intron_retention	FALSE	canonical	3	540	junction_4	34.0941074566457	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTTCTGGGATTTTAA	NA	False	NA	0	True	AATAAA	-25	NA	38088028	38070124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074820_38074930_38075021_38076508_38076574_38076730_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.22	chr18	-	3061	11	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-7	-101	intron_retention	FALSE	canonical	1	2	junction_9	176.789281349294	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTTTCTGGGATTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	38088034	38070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38087734_38087818_38087911
ES.16458.23	chr18	-	1931	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	0	101	0	-101	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTTTCTGGGATTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	38088069	38070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.24	chr18	-	1890	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	-101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	149.009450460468	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTTTCTGGGATTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	38088035	38070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076515_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.25	chr18	-	2518	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-3	-101	intron_retention	FALSE	canonical	3	500	junction_2	39.5610463573562	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTTTCTGGGATTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	38088030	38070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.26	chr18	-	6794	10	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-14	-101	intron_retention	FALSE	canonical	3	500	junction_1	36.2739916349966	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTTTCTGGGATTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	38088041	38070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.27	chr18	-	2251	14	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	0	-102	intron_retention	FALSE	canonical	1	2	junction_11	155.626468292306	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTTTCTGGGATTTT	NA	False	NA	-2	True	AATAAA	-23	NA	38088027	38070126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085537_38085667_38087734_38087818_38087911
ES.16458.28	chr18	-	2948	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-2	-103	intron_retention	FALSE	canonical	3	500	junction_2	41.528019322969	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACCTTTCTGGGATTT	NA	False	NA	-3	True	AATAAA	-22	NA	38088029	38070127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.29	chr18	-	1872	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	1	-103	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	150.006870590949	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACCTTTCTGGGATTT	NA	False	NA	-3	True	AATAAA	-22	NA	38088026	38070127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085537_38085667_38087734_38087818_38087911
ES.16458.3	chr18	-	2232	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_11	161.472456371564	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088035	38070024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38087734_38087818_38087911
ES.16458.30	chr18	-	1989	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-12	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	150.760064137607	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACCTTTCTGGGATTT	NA	False	NA	-3	True	AATAAA	-22	NA	38088039	38070127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077353_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.31	chr18	-	6080	11	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-14	-103	intron_retention	FALSE	canonical	0	0	junction_6	174.238227722851	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACCTTTCTGGGATTT	NA	False	NA	-3	True	AATAAA	-22	NA	38088041	38070127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078465_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.32	chr18	-	2842	12	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	0	-106	intron_retention	FALSE	canonical	1	2	junction_10	168.56496895954	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTACCTTTCTGGGA	NA	False	NA	-6	True	AATAAA	-19	NA	38088069	38070130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38087734_38087818_38087911
ES.16458.33	chr18	-	2270	14	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	7	-106	intron_retention	FALSE	canonical	0	0	junction_9	156.353339791337	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTACCTTTCTGGGA	NA	False	NA	-6	True	AATAAA	-19	NA	38088020	38070130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078465_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.35	chr18	-	2607	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	0	-107	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTACCTTTCTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	38088069	38070131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.36	chr18	-	1924	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	7	-110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	150.760064137607	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTTCT	NA	False	NA	-10	True	AATAAA	-15	NA	38088020	38070134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076856_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.37	chr18	-	2258	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-2	-111	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTGTACCTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	38088029	38070135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.4	chr18	-	2040	15	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	200.610039018744	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088035	38070024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076831_38077181_38077263_38077944_38078079_38078392_38078465_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.5	chr18	-	3057	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	500	junction_2	41.528019322969	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTAGTTAGGCCAT	NA	False	NA	-6	True	AATAAA	-20	NA	38088036	38070025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.6	chr18	-	5972	12	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-12	-6	intron_retention	FALSE	canonical	0	0	junction_7	164.05975528991	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTACTTTATTAGTTAG	NA	False	NA	-11	True	AATAAA	-15	NA	38088039	38070030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078465_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.7	chr18	-	2251	14	NNC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-3	-7	intron_retention	FALSE	canonical	0	0	junction_9	156.362497963005	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088030	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38070737_38074005_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078465_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16458.9	chr18	-	2886	12	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	536	junction_5	35.0638143159036	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	False	NA	-12	True	AATAAA	-14	NA	38088036	38070031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38070737_38074005_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ES.16459.1	chr18	+	2912	7	NNC	ENSMUSG00000044024.17	novel	1762	8	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_5	1.06718737290547	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCATCCTGGCTCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	38088122	38092224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38089875_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091435_38091564_38091625_38091811
ES.16459.2	chr18	+	2626	7	NIC	ENSMUSG00000044024.17	novel	1762	8	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_6	1.06718737290547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGTTGCTCTGCATCC	NA	False	NA	NA	False	AATAAA	-13	NA	38088153	38092215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38089621_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091564_38091625_38091811
ES.16459.3	chr18	+	1739	8	FSM	ENSMUSG00000044024.17	ENSMUST00000070709.9	1767	8	27	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_7	1.03015750727543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGCTCCAGCTCCTTC	NA	False	NA	NA	False	AATAAA	-29	NA	38088638	38092231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38088963_38089380_38089621_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091564_38091625_38091811
ES.1646.1	chr1	-	162	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	155552258	155552096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155552100_155552300
ES.16460.1	chr18	-	4637	19	NNC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-4	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	4.34364869097597	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCATGTGTTCGTCCT	NA	False	NA	0	True	AATAAA	-18	NA	38102814	38090484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097218_38097361_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100955_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ES.16460.2	chr18	-	5592	15	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-6	0	intron_retention	FALSE	canonical	2	2	junction_12	3.62882451310873	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	-2	True	AATAAA	-16	NA	38102833	38090486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100955_38101266_38101849_38102407_38102506_38102758
ES.16460.3	chr18	-	4272	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	-2	0	-2	0	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	-2	True	AATAAA	-16	NA	38102829	38090486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ES.16460.4	chr18	-	4315	20	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_17	3.66158465914233	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTCATGTGTTCGT	NA	False	NA	-3	True	AATAAA	-15	NA	38102821	38090487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101387_38101802_38101849_38102407_38102506_38102758
ES.16460.6	chr18	-	2942	19	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	0	-1683	intron_retention	FALSE	canonical	2	8	junction_12	2.4317854031377	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGGCCTGGGCCTCTTG	NA	False	NA	NA	False	AATAAA	-16	NA	38102810	38092169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ES.16460.8	chr18	-	2738	19	NIC	ENSMUSG00000038524.14	novel	4270	20	NA	NA	-9	-1685	intron_retention	FALSE	canonical	2	8	junction_12	2.55072006294422	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGGGCCTGGGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	38102836	38092171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ES.16460.9	chr18	-	2403	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	6	1861	1	-1861	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTCCGTCTTCCCCCTG	NA	False	NA	NA	False	NA	NA	NA	38102821	38092347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ES.16461.1	chr18	-	5193	32	NIC	ENSMUSG00000024451.10	novel	5359	33	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.613751535175498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATTCTTTTTAGCATC	NA	False	NA	NA	False	AATAAA	-15	NA	38131835	38105681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38106705_38107417_38107556_38107670_38107735_38108439_38108476_38108568_38108652_38108875_38109010_38109092_38109222_38111400_38111516_38111597_38111673_38112884_38112954_38113234_38113383_38114361_38114468_38115013_38115227_38117286_38117451_38117641_38117706_38118365_38118586_38120607_38120711_38120806_38120955_38121367_38121482_38122111_38122248_38122415_38122599_38122738_38122825_38122928_38123129_38123564_38123672_38123754_38123940_38124020_38124142_38124380_38124451_38124591_38124784_38129261_38129374_38129471_38129534_38129638_38130145_38131748
ES.16461.2	chr18	-	5221	33	NIC	ENSMUSG00000024451.10	novel	5219	33	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.60917464655056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATTCTTTTTAGCATC	NA	False	NA	NA	False	AATAAA	-15	NA	38131792	38105681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38106705_38107154_38107194_38107417_38107556_38107670_38107735_38108439_38108476_38108568_38108652_38108875_38109010_38109092_38109222_38111400_38111516_38111597_38111673_38112884_38112954_38113234_38113383_38114361_38114468_38115013_38115227_38117286_38117451_38117641_38117706_38118365_38118586_38120607_38120711_38120806_38120955_38121367_38121482_38122111_38122248_38122415_38122599_38122738_38122825_38122928_38123129_38123564_38123672_38123754_38123940_38124020_38124142_38124380_38124451_38124591_38124784_38129261_38129374_38129471_38129534_38129638_38130177_38131748
ES.16461.3	chr18	-	5201	33	FSM	ENSMUSG00000024451.10	ENSMUST00000237272.2	5359	33	153	5	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.60917464655056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCATTCTTTTTAG	NA	False	NA	NA	False	AATAAA	-11	NA	38131808	38105685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38106705_38107154_38107194_38107417_38107556_38107670_38107735_38108439_38108476_38108568_38108652_38108875_38109010_38109092_38109222_38111400_38111516_38111597_38111673_38112884_38112954_38113234_38113383_38114361_38114468_38115013_38115227_38117286_38117451_38117641_38117706_38118365_38118586_38120607_38120711_38120806_38120955_38121367_38121482_38122111_38122248_38122415_38122599_38122738_38122825_38122928_38123129_38123564_38123672_38123754_38123940_38124020_38124142_38124380_38124451_38124591_38124784_38129261_38129374_38129471_38129534_38129638_38130145_38131748
ES.16461.4	chr18	-	142	1	Intergenic	novelGene_13749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAGATAAATAA	NA	False	NA	NA	False	NA	NA	NA	38112331	38112189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38112200_38112300
ES.16462.1	chr18	-	156	1	Intergenic	novelGene_13750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATATTTAAA	5001	False	NA	NA	False	NA	NA	NA	38198845	38198689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38198700_38198800
ES.16463.1	chr18	+	136	1	Intergenic	novelGene_13751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	9799	False	NA	NA	False	NA	NA	NA	38260885	38261021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38260900_38261000
ES.16464.1	chr18	+	355	2	Intergenic	novelGene_13752	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	38288563	38289016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38288750_38288847
ES.16465.1	chr18	-	3903	3	FSM	ENSMUSG00000051375.16	ENSMUST00000159405.3	3880	3	-23	0	-23	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTATTTTCT	5070	False	NA	NA	False	AATAAA	-17	NA	38345046	38329746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38332582_38335796_38336660_38344841
ES.16466.1	chr18	-	198	1	Intergenic	novelGene_13753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAGAACAATGTTAG	NA	False	NA	NA	False	NA	NA	NA	38360865	38360667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38360700_38360900
ES.16466.2	chr18	-	177	2	Antisense	novelGene_ENSMUSG00000089983.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAATAACCCTTTT	8286	False	NA	NA	False	NA	NA	NA	38367266	38360686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_38360694_38367096
ES.16466.3	chr18	-	171	2	Antisense	novelGene_ENSMUSG00000089983.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAATAACCCTTTT	4776	False	NA	NA	False	NA	NA	NA	38370776	38360686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_38360694_38370612
ES.16466.4	chr18	-	177	1	Intergenic	novelGene_13754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGTGCTGCTTACT	8287	False	NA	NA	False	NA	NA	NA	38367265	38367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38367100_38367300
ES.16466.5	chr18	-	174	1	Intergenic	novelGene_13755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4773	False	NA	NA	False	NA	NA	NA	38370779	38370605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38370600_38370800
ES.16467.1	chr18	+	2428	1	Antisense	novelGene_ENSMUSG00000097080.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTTAGATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	38372693	38375121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_38372700_38375100
ES.16468.1	chr18	-	1404	3	FSM	ENSMUSG00000097080.9	ENSMUST00000235525.2	461	3	-304	-639	-9	12	multi-exon	FALSE	canonical	1	1	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAAGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	38383235	38371486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38372243_38372625_38372805_38382766
ES.16469.1	chr18	+	2409	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	-15	0	-11	0	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3952	False	NA	20	True	AATAAA	-21	NA	38383296	38395682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.10	chr18	+	2550	14	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-7	intron_retention	FALSE	canonical	1	3	junction_9	134.270371059213	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCGGTCTTGCCCTT	3968	False	NA	13	True	AATAAA	-14	NA	38383312	38395675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38390749_38390914_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.12	chr18	+	6374	9	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	128.941847357636	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3968	False	NA	17	True	AATAAA	-18	NA	38383312	38395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38391416_38392949_38393110_38394116_38394363_38394474
ES.16469.13	chr18	+	2363	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_12	106.034978505523	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3973	False	NA	17	True	AATAAA	-18	NA	38383317	38395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394317_38394932
ES.16469.15	chr18	+	2472	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-6	intron_retention	FALSE	canonical	1	7	junction_1	104.877309271358	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3976	False	NA	14	True	AATAAA	-15	NA	38383320	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383546_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.16	chr18	+	1410	7	FSM	ENSMUSG00000024442.7	ENSMUST00000236078.2	1837	7	-6	433	2	-433	multi-exon	FALSE	canonical	3	315	junction_6	32.9515637801236	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGACTCAGCAGTTTG	3977	False	NA	NA	False	ATTAAA	-11	NA	38383321	38388172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522
ES.16469.18	chr18	+	2462	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	4	-3	intron_retention	FALSE	canonical	3	315	junction_6	28.9099485293029	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3979	False	NA	17	True	AATAAA	-18	NA	38383323	38395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.19	chr18	+	2471	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	3	-3	intron_retention	FALSE	canonical	3	351	junction_5	22.4514167860846	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3988	False	NA	17	True	AATAAA	-18	NA	38383332	38395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.2	chr18	+	2393	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	-7	-7	intron_retention	FALSE	canonical	0	0	junction_10	107.394489564823	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCGGTCTTGCCCTT	3956	False	NA	13	True	AATAAA	-14	NA	38383300	38395675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391420_38392958_38393110_38394116_38394339_38394932
ES.16469.20	chr18	+	8722	8	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	-4	-6	intron_retention	FALSE	canonical	0	0	junction_7	136.251268483142	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3992	False	NA	14	True	AATAAA	-15	NA	38383336	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38387123_38387332_38387422_38387522_38393110_38394116_38394363_38394474
ES.16469.21	chr18	+	5866	9	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	351	junction_5	22.070554478762	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGGTCTTGCCCTTGA	3992	False	NA	15	True	AATAAA	-16	NA	38383336	38395677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.22	chr18	+	2134	11	ISM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	1022	6	993	-6	3prime_fragment	FALSE	canonical	3	315	junction_4	29.593918294136	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	4989	False	NA	14	True	AATAAA	-15	NA	38384333	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.23	chr18	+	5272	8	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	2908	-6	intron_retention	FALSE	canonical	3	315	junction_2	29.0811671999988	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	6904	False	NA	14	True	AATAAA	-15	NA	38386248	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38387123_38387332_38387422_38387522_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.24	chr18	+	7389	2	NNC	ENSMUSG00000024442.7	novel	704	4	NA	NA	-3129	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	8831	False	NA	14	True	AATAAA	-15	NA	38388175	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38394363_38394474
ES.16469.25	chr18	+	1126	3	ISM	ENSMUSG00000024442.7	ENSMUST00000236841.2	704	4	1644	-532	1644	-7	3prime_fragment	FALSE	canonical	3	403	junction_2	1.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCGGTCTTGCCCTT	NA	False	NA	13	True	AATAAA	-14	NA	38392948	38395675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_38393110_38394116_38394339_38394932
ES.16469.3	chr18	+	5712	11	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	315	junction_6	29.5729606228392	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3961	False	NA	14	True	AATAAA	-15	NA	38383305	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.4	chr18	+	1051	7	FSM	ENSMUSG00000024442.7	ENSMUST00000236078.2	1837	7	-20	806	0	-806	multi-exon	FALSE	canonical	3	315	junction_6	32.9515637801236	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGGCTCTGTCTTGA	3963	False	NA	NA	False	NA	NA	NA	38383307	38387799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522
ES.16469.5	chr18	+	2232	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_8	111.952986000286	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3964	False	NA	14	True	AATAAA	-15	NA	38383308	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.6	chr18	+	2364	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_7	107.403057063878	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3964	False	NA	14	True	AATAAA	-15	NA	38383308	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387593_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.7	chr18	+	2296	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	0	-5	intron_retention	FALSE	canonical	2	3	junction_9	111.198801943722	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCGGTCTTGCCCTTGA	3967	False	NA	15	True	AATAAA	-16	NA	38383311	38395677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38392949_38393110_38394116_38394339_38394932
ES.16469.8	chr18	+	5078	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-6	intron_retention	FALSE	canonical	3	315	junction_6	28.5332921397195	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	3968	False	NA	14	True	AATAAA	-15	NA	38383312	38395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ES.16469.9	chr18	+	5116	10	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_9	121.735596912142	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCTTGCCCTTGAGT	3968	False	NA	17	True	AATAAA	-18	NA	38383312	38395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38393110_38394116_38394363_38394474
ES.1647.1	chr1	-	3338	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	10	0	10	0	multi-exon	FALSE	canonical	3	21	junction_6	6.25887799202127	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	False	NA	-1	True	AATAAA	-23	NA	155688625	155653903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ES.1647.2	chr1	-	2481	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	-45	-3	0	0	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGTTTGACTTGATC	NA	False	NA	-2	True	AATAAA	-22	NA	155688635	155653904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ES.1647.3	chr1	-	4729	12	NIC	ENSMUSG00000033684.15	novel	2433	13	NA	NA	12	-1	intron_retention	FALSE	canonical	3	21	junction_7	5.74096487412616	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGTGTTTGACTTGAT	NA	False	NA	-3	True	AATAAA	-21	NA	155688623	155653905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155670395_155671096_155671143_155679442_155679544_155688271
ES.1647.4	chr1	-	2463	13	NNC	ENSMUSG00000033684.15	novel	2433	13	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.3279555898864	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGAACGTGTTTGACTT	NA	False	NA	-6	True	AATAAA	-18	NA	155688612	155653908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670282_155670395_155671096_155671143_155679442_155679544_155688271
ES.1647.5	chr1	-	2508	14	NNC	ENSMUSG00000033684.15	novel	2433	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.5768642670937	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGAACGTGTTTGACTT	NA	False	NA	-6	True	AATAAA	-18	NA	155688584	155653908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155668959_155669042_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ES.1647.6	chr1	-	2722	2	FSM	ENSMUSG00000033684.15	ENSMUST00000140809.2	2664	2	-32	-26	-19	26	multi-exon	FALSE	canonical	3	34	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTGTCATTTACTAC	NA	False	NA	NA	False	NA	NA	NA	155688616	155677166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155679544_155688271
ES.16470.1	chr18	-	158	1	Intergenic	novelGene_13756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	38427437	38427279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38427300_38427400
ES.16471.1	chr18	+	3134	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	-40	-54	-40	54	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTTTCTGTCTGT	886	False	NA	77	True	NA	NA	NA	38429647	38450956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.10	chr18	+	3328	12	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.283580290014	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCCTGTTGATC	964	False	NA	26	True	AATAAA	-31	NA	38429725	38450905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38430324_38430485_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.11	chr18	+	1783	3	NNC	ENSMUSG00000060450.15	novel	2822	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	965	False	NA	16	True	AATAAA	-21	NA	38429726	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38440917_38441258_38449577
ES.16471.12	chr18	+	2512	6	NIC	ENSMUSG00000060450.15	novel	2886	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	90.4486594704421	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACACGGTGTCCTGT	965	False	NA	21	True	AATAAA	-26	NA	38429726	38450900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.13	chr18	+	3166	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	100.138546000338	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTAATTGAAGTAGACA	966	False	NA	10	True	AATAAA	-15	NA	38429727	38450889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430305_38430485_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.14	chr18	+	2827	8	NNC	ENSMUSG00000060450.15	novel	2822	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_2	78.3558080365535	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	967	False	NA	16	True	AATAAA	-21	NA	38429728	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432950_38433464_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.15	chr18	+	3696	9	NNC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	-2	0	intron_retention	FALSE	non_canonical	3	38	junction_3	97.1274130974361	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACACGGTGTCCTGT	967	False	NA	21	True	AATAAA	-26	NA	38429728	38450900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38430629_38431361_38431449_38432806_38432950_38433464_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.16	chr18	+	2822	1	FSM	ENSMUSG00000089296.4	ENSMUST00000158671.4	103	1	-1263	-1456	-1263	1456	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTTAAGATACTTGTT	967	False	NA	NA	False	NA	NA	NA	38429728	38432550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429700_38432600
ES.16471.17	chr18	+	1715	4	NNC	ENSMUSG00000060450.15	novel	618	4	NA	NA	-2	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.723058576649	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGACTTGTGTTTCTGTC	967	False	NA	74	True	NA	NA	NA	38429728	38450953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432950_38433464_38433538_38449577
ES.16471.18	chr18	+	3144	11	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_4	94.2422941146914	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	967	False	NA	18	True	AATAAA	-23	NA	38429728	38450897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432950_38433464_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.19	chr18	+	2987	10	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_4	98.9595253339515	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	970	False	NA	16	True	AATAAA	-21	NA	38429731	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432950_38433464_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.2	chr18	+	2962	8	FSM	ENSMUSG00000060450.15	ENSMUST00000170811.8	2886	8	-23	-53	-23	51	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGACTTGTGTTTCTGTC	903	False	NA	74	True	NA	NA	NA	38429664	38450953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.20	chr18	+	2720	8	NNC	ENSMUSG00000060450.15	novel	2886	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	103.241543607845	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTAGACACGGTGTCC	970	False	NA	18	True	AATAAA	-23	NA	38429731	38450897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432950_38433464_38433538_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.21	chr18	+	2454	8	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	88.3527253775041	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAAGTAGACACGGTG	973	False	NA	15	True	AATAAA	-20	NA	38429734	38450894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.22	chr18	+	3487	8	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	120	junction_2	57.3670601637973	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	974	False	NA	16	True	AATAAA	-21	NA	38429735	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38432806_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.24	chr18	+	2985	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTAATTGAAGTAGACA	979	False	NA	10	True	AATAAA	-15	NA	38429740	38450889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.27	chr18	+	2075	2	ISM	ENSMUSG00000060450.15	ENSMUST00000235812.2	548	5	12153	426	1	-396	internal_fragment	FALSE	canonical	3	52	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTTAAGATACTTGTT	981	False	NA	NA	False	NA	NA	NA	38429742	38432550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_38430629_38431361
ES.16471.28	chr18	+	3208	11	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.928727322346	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	982	False	NA	16	True	AATAAA	-21	NA	38429743	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38430552_38430629_38432806_38432980_38433481_38433644_38434172_38434328_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.29	chr18	+	2901	9	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	97.9271891509197	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	982	False	NA	16	True	AATAAA	-21	NA	38429743	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430552_38430629_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.3	chr18	+	3234	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	92.6777211631792	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGGTGTCCTGTTGAT	931	False	NA	25	True	AATAAA	-30	NA	38429692	38450904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.30	chr18	+	3338	7	NIC	ENSMUSG00000060450.15	novel	2822	8	NA	NA	2	4	intron_retention	FALSE	canonical	3	128	junction_2	47.5899732670187	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGTGTCCTGTTGATCC	982	False	NA	27	True	AATAAA	-32	NA	38429743	38450906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38432806_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.32	chr18	+	3032	10	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_2	100.404859456448	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	990	False	NA	16	True	AATAAA	-21	NA	38429751	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38430552_38430629_38432806_38432950_38433464_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.33	chr18	+	2859	9	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.4695766237762	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTGAAGTAGACACGGT	992	False	NA	14	True	AATAAA	-19	NA	38429753	38450893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38432806_38432980_38433481_38433538_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.34	chr18	+	3038	10	FSM	ENSMUSG00000060450.15	ENSMUST00000236116.2	2410	10	28	-656	0	0	multi-exon	FALSE	canonical	2	2	junction_2	94.0070919310524	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	997	False	NA	16	True	AATAAA	-21	NA	38429758	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429852_38430552_38430629_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.35	chr18	+	2935	9	NNC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_2	77.7551244291976	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCATCCTGTAATTGAA	998	False	NA	3	True	AATAAA	-8	NA	38429759	38450882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432950_38433464_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.36	chr18	+	3004	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	96.6517229828602	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAAGTAGACACGGTG	999	False	NA	15	True	AATAAA	-20	NA	38429760	38450894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.37	chr18	+	2145	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	19	658	7	-2	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAATCCTTGTGGGTCAC	1004	False	NA	NA	False	ATTAAA	-14	NA	38429765	38450237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.38	chr18	+	2108	5	NNC	ENSMUSG00000060450.15	novel	2822	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.2291030106501	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	1005	False	NA	16	True	AATAAA	-21	NA	38429766	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441288_38449577
ES.16471.39	chr18	+	1605	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	41	-1028	-35	0	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	1032	False	NA	16	True	AATAAA	-21	NA	38429793	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
ES.16471.4	chr18	+	3186	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACACGGTGTCCTGTTGA	944	False	NA	24	True	AATAAA	-29	NA	38429705	38450903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.40	chr18	+	3503	8	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	-4	4	intron_retention	FALSE	canonical	2	2	junction_1	89.4465979093169	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGTGTCCTGTTGATCC	1092	False	NA	27	True	AATAAA	-32	NA	38429853	38450906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430629_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.41	chr18	+	3324	10	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	99.6138222349033	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGTGTCCTGTTGATCC	1098	False	NA	27	True	AATAAA	-32	NA	38429859	38450906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430259_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.42	chr18	+	3248	9	NNC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_1	98.0024712698614	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTGAAGTAGACACGGT	1103	False	NA	14	True	AATAAA	-19	NA	38429864	38450893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38430259_38432806_38432950_38433464_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.43	chr18	+	3340	10	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.5114702147731	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	1113	False	NA	16	True	AATAAA	-21	NA	38429874	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430259_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.44	chr18	+	3170	9	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	97.3594339291268	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCTGTAATTGAAGTAGA	1123	False	NA	8	True	AATAAA	-13	NA	38429884	38450887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430259_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.45	chr18	+	3047	8	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	88.8344022347658	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	1167	False	NA	16	True	AATAAA	-21	NA	38429928	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430259_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.46	chr18	+	3827	9	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	285	-1	intron_retention	FALSE	canonical	3	46	junction_1	76.3649747921126	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAAGTAGACACGGTG	1728	False	NA	15	True	AATAAA	-20	NA	38430489	38450894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.5	chr18	+	3225	10	NNC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-16	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.129915609672	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGACTTGTGTTTCTG	945	False	NA	72	True	NA	NA	NA	38429706	38450951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38429852_38432806_38432980_38433481_38433644_38434172_38434328_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.7	chr18	+	2841	8	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	91.929209676994	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGTAGACACGGTGTC	946	False	NA	17	True	AATAAA	-22	NA	38429707	38450896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.8	chr18	+	3097	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	92.3196272752816	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	949	False	NA	16	True	AATAAA	-21	NA	38429710	38450895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38429852_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16471.9	chr18	+	3716	9	NIC	ENSMUSG00000060450.15	novel	3340	10	NA	NA	3	2	intron_retention	FALSE	canonical	3	46	junction_2	86.5909023800999	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGGTGTCCTGTTGAT	964	False	NA	25	True	AATAAA	-30	NA	38429725	38450904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ES.16472.1	chr18	-	6268	4	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	1055	junction_1	174.392278116511	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCTCCTGAGTT	NA	False	NA	-7	True	AATAAA	-17	NA	38472025	38460587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38468171_38471143_38471276_38471960
ES.16472.10	chr18	-	2059	6	NNC	ENSMUSG00000052102.16	novel	2085	6	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	622.508666606337	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCTTTTGTGAAT	NA	False	NA	-26	True	ATTAAA	-17	NA	38472003	38460606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471956
ES.16472.11	chr18	-	3742	5	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	69	junction_1	521.414901973467	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472005	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38465020_38465206_38466206_38468171_38471143_38471276_38471960
ES.16472.12	chr18	-	4635	6	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	494.345223502766	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472028	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38465511_38468171_38471143_38471276_38471960
ES.16472.13	chr18	-	2241	7	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	468.174824896285	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471962	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471914
ES.16472.14	chr18	-	2819	8	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	563.22152817157	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471994	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38465511_38466104_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.15	chr18	-	2518	7	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	474.266246134196	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471959	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471634
ES.16472.16	chr18	-	6879	5	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1055	junction_1	38.4861988250334	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471994	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38471276_38471960
ES.16472.17	chr18	-	2089	8	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	440.375952558535	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472008	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38461734_38461885_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.18	chr18	-	1950	6	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	513.879908149754	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471996	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463684_38466270_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.19	chr18	-	2410	7	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	474.624764068065	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471963	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471746
ES.16472.2	chr18	-	2314	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	-4	-21	-4	-2	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGCATTCTCCTGAG	NA	False	NA	-9	True	AATAAA	-15	NA	38472060	38460589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.20	chr18	-	2245	7	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	457.509441311203	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472024	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466378_38468068_38468171_38471143_38471276_38471960
ES.16472.21	chr18	-	2208	7	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	473.12882906127	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471994	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463695_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.22	chr18	-	2052	6	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	69	junction_1	491.136233646022	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38471994	38460610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.23	chr18	-	4904	5	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1055	junction_1	153.102090122898	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAAAATGTGTCTTTTG	NA	False	NA	-31	True	ATTAAA	-12	NA	38471992	38460611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38465020_38468171_38471143_38471276_38471960
ES.16472.24	chr18	-	3685	4	NIC	ENSMUSG00000052102.16	novel	2085	6	NA	NA	687	-2	intron_retention	FALSE	canonical	3	67	junction_2	580.632605200761	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAATGTGTCTTTT	NA	False	NA	-32	True	ATTAAA	-11	NA	38471275	38460612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38466206_38468171_38471143
ES.16472.3	chr18	-	3578	6	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	12	-2	intron_retention	FALSE	canonical	3	1055	junction_1	147.281227588583	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGCATTCTCCTGAG	NA	False	NA	-9	True	AATAAA	-15	NA	38472017	38460589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.5	chr18	-	2463	8	NNC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	524.060636778234	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGCATTCTCCTGAG	NA	False	NA	-9	True	AATAAA	-15	NA	38472024	38460589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38468272_38468458_38471143_38471276_38471960
ES.16472.6	chr18	-	3963	6	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	1055	junction_1	137.672945780934	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTGGCATTCTCCTG	NA	False	NA	-11	True	AATAAA	-13	NA	38472032	38460591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38468171_38471143_38471276_38471960
ES.16472.7	chr18	-	3274	6	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1055	junction_1	148.022430732643	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472032	38460602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38462027_38463538_38463714_38465020_38466390_38468068_38468171_38471143_38471276_38471960
ES.16472.8	chr18	-	5535	1	NIC	ENSMUSG00000052102.16	novel	1929	5	NA	NA	-1014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38466137	38460602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38460600_38466100
ES.16472.9	chr18	-	3600	5	NIC	ENSMUSG00000052102.16	novel	2085	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	67	junction_1	544.96995330018	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472032	38460602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ES.16473.1	chr18	+	233	1	Intergenic	novelGene_13757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACACTATCACAGAATG	NA	False	NA	NA	False	AATAAA	-22	NA	38476034	38476267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38476000_38476300
ES.16474.1	chr18	+	182	1	Intergenic	novelGene_13758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAACCACCATG	NA	False	NA	NA	False	NA	NA	NA	38480357	38480539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38480400_38480500
ES.16475.1	chr18	-	2594	3	Genic_Genomic	ENSMUSG00000118140.2	novel	1098	1	NA	NA	-15060	116	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAACAGCACTAATGTT	NA	False	NA	NA	False	AAAACA	-20	NA	38508651	38492377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_38494672_38499986_38500118_38508482
ES.16475.2	chr18	-	2534	3	Genic_Genomic	ENSMUSG00000118140.2	novel	1098	1	NA	NA	-7178	89	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38500769	38492404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_38494672_38499986_38500118_38500633
ES.16476.1	chr18	+	177	1	Intergenic	novelGene_13759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	38516684	38516861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38516700_38516900
ES.16477.1	chr18	+	1822	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	-27	1	-27	-1	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTAGTGTTTCATTTGGG	9040	False	NA	43	True	AATAAA	-28	NA	38551932	38598249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ES.16477.10	chr18	+	6022	1	NIC	ENSMUSG00000024425.5	novel	1723	8	NA	NA	7853	-13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTACTGTAGATTAGT	NA	False	NA	31	True	AATAAA	-16	NA	38592215	38598237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38592200_38598200
ES.16477.2	chr18	+	1002	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	-4	798	-4	16	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCATTTCTCTCTA	9063	False	NA	3	True	AATAAA	-10	NA	38551955	38597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ES.16477.3	chr18	+	5518	7	NIC	ENSMUSG00000024425.5	novel	1796	8	NA	NA	4	-7	intron_retention	FALSE	canonical	3	612	junction_3	55.6886184262298	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAGATTAGTGTTTCA	9071	False	NA	37	True	AATAAA	-22	NA	38551963	38598243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38552230_38575969_38576058_38580743_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ES.16477.4	chr18	+	1771	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	-34	-345	-7	-13	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTACTGTAGATTAGT	9095	False	NA	31	True	AATAAA	-16	NA	38551987	38598237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
ES.16477.5	chr18	+	1736	8	NNC	ENSMUSG00000024425.5	novel	1796	8	NA	NA	-7	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.285756576161	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTACTGTAGATTAGT	9095	False	NA	31	True	AATAAA	-16	NA	38551987	38598237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593616_38593704_38597329
ES.16477.6	chr18	+	4644	7	NIC	ENSMUSG00000024425.5	novel	838	8	NA	NA	-1	21	intron_retention	FALSE	canonical	3	26	junction_4	244.583091993067	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATTTCTCTCTATTTGT	9101	False	NA	8	True	AATAAA	-15	NA	38551993	38597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_38552230_38575969_38576058_38580743_38584696_38585357_38585425_38589107_38589175_38593597_38593704_38597329
ES.16477.7	chr18	+	1081	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	3	308	3	148	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCCTTATATATTGTT	9132	False	NA	NA	False	AAAAAG	-32	NA	38552024	38597584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
ES.16477.8	chr18	+	1436	6	ISM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	28779	7	-27	-7	3prime_fragment	FALSE	canonical	3	612	junction_2	33.8266167388937	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAGATTAGTGTTTCA	NA	False	NA	37	True	AATAAA	-22	NA	38580738	38598243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ES.16477.9	chr18	+	2884	4	NNC	ENSMUSG00000024425.5	novel	1723	8	NA	NA	1834	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	301.07621774044	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTACTGTAGATTAGT	NA	False	NA	31	True	AATAAA	-16	NA	38586196	38598237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_38586258_38587365_38589175_38593597_38593704_38597329
ES.16478.1	chr18	+	4915	1	Intergenic	novelGene_13760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38647830	38652745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38647800_38652700
ES.16479.1	chr18	-	173	1	Intergenic	novelGene_13761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAACAAGCAGGGGC	NA	False	NA	NA	False	NA	NA	NA	38660595	38660422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38660400_38660600
ES.1648.1	chr1	+	207	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	AATAAA	-10	NA	155787356	155787563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155787400_155787600
ES.16480.1	chr18	-	158	1	Intergenic	novelGene_13762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3481	False	NA	NA	False	NA	NA	NA	38668266	38668108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38668100_38668300
ES.16481.1	chr18	+	177	1	Intergenic	novelGene_13763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38670822	38670999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38670800_38671000
ES.16482.1	chr18	-	180	1	Intergenic	novelGene_13764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTC	NA	False	NA	NA	False	NA	NA	NA	38715133	38714953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38715000_38715100
ES.16483.1	chr18	-	4669	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	68	18	68	-18	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCTGCCATTCTCTT	NA	False	NA	NA	False	TATAAA	-19	NA	38734400	38719317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38723809_38734222
ES.16483.2	chr18	-	1928	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	98	2729	98	-2729	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAACAATAATAATACAA	NA	False	NA	NA	False	ATTAAA	-17	NA	38734370	38722028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_38723809_38734222
ES.16484.1	chr18	-	156	1	Intergenic	novelGene_13765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGATTTTGG	NA	False	NA	NA	False	NA	NA	NA	38741944	38741788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38741800_38741900
ES.16485.1	chr18	+	141	1	Intergenic	novelGene_13766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAGAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	38775066	38775207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38775100_38775200
ES.16486.1	chr18	-	135	1	Intergenic	novelGene_13767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38808758	38808623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38808600_38808800
ES.16487.1	chr18	-	184	1	Intergenic	novelGene_13768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAACTTCTC	NA	False	NA	NA	False	NA	NA	NA	38810177	38809993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38810000_38810200
ES.16488.1	chr18	-	179	1	Intergenic	novelGene_13769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	38842169	38841990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38842000_38842200
ES.16489.1	chr18	+	171	1	Intergenic	novelGene_13770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGCCC	5603	False	NA	NA	False	NA	NA	NA	38875188	38875359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_38875200_38875400
ES.1649.1	chr1	+	198	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTCAGAGCTGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	155840403	155840601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155840400_155840600
ES.16490.1	chr18	-	177	1	Intergenic	novelGene_13771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGTTGG	4145	False	NA	NA	False	NA	NA	NA	38877370	38877193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_38877200_38877400
ES.16491.1	chr18	+	1688	4	ISM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-425	268043	-94	2970	5prime_fragment	FALSE	canonical	3	26	junction_3	1.24721912892465	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGATCATGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	39126103	39236172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221
ES.16491.10	chr18	+	209	1	Intergenic	novelGene_13773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCCTTCCCTCTTTGCCC	NA	False	NA	NA	False	AAAAAG	-41	NA	39228767	39228976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_39228800_39229000
ES.16491.11	chr18	+	3404	1	NIC	ENSMUSG00000036452.19	novel	7898	23	NA	NA	8531	11096	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39240894	39244298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_39240900_39244300
ES.16491.12	chr18	+	5892	7	NNC	ENSMUSG00000036452.19	novel	529	5	NA	NA	-5210	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.6105794668292	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTGTGTTTGTTTCTT	NA	False	NA	2	True	ATTAAA	-14	NA	39419277	39509335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_39419308_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
ES.16491.13	chr18	+	940	4	NIC	ENSMUSG00000036452.19	novel	2515	12	NA	NA	-5043	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	5.8878405775519	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGACTTTGAGCGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	39419444	39440425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_39419740_39429837_39429977_39439754_39439906_39440070
ES.16491.2	chr18	+	4038	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-401	-1357	-70	8	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAAAGTTTTATATTT	NA	False	NA	NA	False	GATAAA	-29	NA	39126127	39505572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
ES.16491.3	chr18	+	7780	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-377	-5123	-46	1	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTGTTTGTTTCTTGGG	NA	False	NA	5	True	ATTAAA	-17	NA	39126151	39509338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
ES.16491.4	chr18	+	2705	21	NIC	ENSMUSG00000036452.19	novel	6415	22	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGACTTTGAGCGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	39126166	39440425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
ES.16491.5	chr18	+	5655	23	NNC	ENSMUSG00000036452.19	novel	7898	23	NA	NA	31	-975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	8.58898487348911	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGTGGATGCCTCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	39126228	39507286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490721_39496169_39496262_39504126
ES.16491.6	chr18	+	4437	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-300	-1857	31	508	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGTTCTTGGTCATT	NA	False	NA	NA	False	TATAAA	-40	NA	39126228	39506072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
ES.16491.7	chr18	+	7849	23	NNC	ENSMUSG00000036452.19	novel	7898	23	NA	NA	37	0	intron_retention	FALSE	non_canonical	0	0	junction_12	9.62091385841669	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTGTTTGTTTCTTGG	NA	False	NA	4	True	ATTAAA	-16	NA	39126234	39509337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338368_39360426_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490882_39496169_39496262_39504126
ES.16491.9	chr18	+	2287	21	Fusion	ENSMUSG00000118193.2_ENSMUSG00000036452.19	novel	2515	12	NA	NA	16206	-1	multi-exon	FALSE	canonical	0	0	junction_1	8.16256699819364	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGACTTTGAGCGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	39142734	39440425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_39142833_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
ES.16492.1	chr18	-	2037	1	Intergenic	novelGene_13772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39166632	39164595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_39164600_39166600
ES.16493.1	chr18	-	3217	1	Intergenic	novelGene_13774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39241227	39238010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_39238000_39241200
ES.16494.1	chr18	-	2375	1	Intergenic	novelGene_13775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGTCCATTGGGATG	NA	False	NA	NA	False	AATACA	-40	NA	39468287	39465912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_39465900_39468300
ES.16495.1	chr18	+	2213	2	Antisense	novelGene_ENSMUSG00000085289.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACGTAAGGGGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	39518482	39520835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_39519624_39519763
ES.16496.1	chr18	+	3484	2	Antisense	novelGene_ENSMUSG00000024431.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACATTTTTGATAGACC	NA	False	NA	NA	False	AATAAA	-17	NA	39530761	39669953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_39530863_39666570
ES.16497.11	chr18	-	7079	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	216	-230	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTGTAGTTTAAAAACC	NA	False	NA	-3	True	AATAAA	-27	NA	39623511	39543829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.12	chr18	-	6201	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	-9	244	-9	-242	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCTGAATAACCTGT	NA	False	NA	-15	True	AATAAA	-15	NA	39623736	39543841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ES.16497.15	chr18	-	5315	9	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	6	22	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39622935	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.16	chr18	-	5011	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	5	1420	5	22	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39623722	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ES.16497.17	chr18	-	11277	6	NIC	ENSMUSG00000024431.16	novel	6327	8	NA	NA	51897	22	intron_retention	FALSE	canonical	3	54	junction_4	8.37615663654877	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39568388	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669
ES.16497.18	chr18	-	4931	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	206	22	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	22.6770809408971	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39624146	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39624124
ES.16497.19	chr18	-	5158	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	207	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39623520	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623271
ES.16497.2	chr18	-	6570	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-23	-10	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	22.6770809408971	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39624377	39543609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39624124
ES.16497.20	chr18	-	5178	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	75	22	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	21.4242852856285	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39622261	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39621992
ES.16497.21	chr18	-	5113	9	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-57	22	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	28.5282206770769	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATATGCTTTGTTATT	NA	False	NA	NA	False	AATAGA	-28	NA	39622998	39545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561666_39561834_39619050_39620299_39622797
ES.16497.22	chr18	-	5080	9	NNC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	238	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AATAGA	-6	NA	39624114	39545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623921
ES.16497.23	chr18	-	5248	9	NNC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-3	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAATGTTATATGGTTA	NA	False	NA	NA	False	AATAGA	-13	NA	39622944	39545130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622492
ES.16497.24	chr18	-	5106	9	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-78	-271	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTCTCTAAAAGGGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	39623019	39545310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.25	chr18	-	4827	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	211	-280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTTGAATTCTCTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	39624141	39545319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623921
ES.16497.26	chr18	-	4836	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-1	-280	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	22.6770809408971	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTTGAATTCTCTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	39624353	39545319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39624124
ES.16497.27	chr18	-	4869	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	-155	1722	-155	-280	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTTGAATTCTCTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	39623882	39545319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ES.16497.28	chr18	-	5051	9	NNC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	3	-282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTGAATTCTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	39622938	39545321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622492
ES.16497.3	chr18	-	6528	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	220	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39624132	39543609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623921
ES.16497.30	chr18	-	4665	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-183	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTTTTGAATTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	39623124	39545323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623062
ES.16497.32	chr18	-	4736	9	FSM	ENSMUSG00000024431.16	ENSMUST00000025300.13	4989	9	-49	302	-7	-302	multi-exon	FALSE	canonical	2	2	junction_8	22.6770809408971	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	39622948	39545341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622797
ES.16497.33	chr18	-	5725	8	NNC	ENSMUSG00000024431.16	novel	6327	8	NA	NA	242	-302	intron_retention	FALSE	canonical	0	0	junction_1	28.7785350848971	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	39622657	39545341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39548907_39553680_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561666_39561834_39619050_39620299_39622529
ES.16497.34	chr18	-	3009	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	10	3417	10	520	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCTTGCTCGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	39623717	39547014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ES.16497.35	chr18	-	3109	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	171	518	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGCTTGCTCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	39622728	39547016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.36	chr18	-	2558	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	21	77	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	23.7421039505769	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTTTTGTCGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	39623706	39547457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561666_39561834_39619050_39620299_39623620
ES.16497.37	chr18	-	2139	4	NIC	ENSMUSG00000024431.16	novel	1891	4	NA	NA	-58	193	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	21.1712593442672	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATCATTTTGTGTGTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	39622999	39557295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.4	chr18	-	7193	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	34	-10	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	27.6899688515534	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39622865	39543609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561666_39561834_39619050_39620299_39621992
ES.16497.5	chr18	-	6471	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	-47	12	-47	-10	multi-exon	FALSE	canonical	3	29	junction_8	14.4649360523993	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTCCCAACATGTTTT	NA	False	NA	-23	True	AATAAA	-20	NA	39623774	39543609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ES.16497.6	chr18	-	6797	9	NIC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	-69	-11	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTCCCAACATGTTT	NA	False	NA	-24	True	AATAAA	-19	NA	39623010	39543610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
ES.16497.8	chr18	-	6712	9	NNC	ENSMUSG00000024431.16	novel	6436	9	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3063832457977	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGACTCCCAACATGT	NA	False	NA	-26	True	AATAAA	-17	NA	39622890	39543612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622492
ES.16498.1	chr18	-	159	1	Intergenic	novelGene_13776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	39947523	39947364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_39947400_39947500
ES.16499.1	chr18	+	178	1	Intergenic	novelGene_13777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTCTTGCCCT	NA	False	NA	NA	False	NA	NA	NA	40297105	40297283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_40297100_40297300
ES.165.1	chr1	-	153	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATTAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	20684452	20684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_20684300_20684500
ES.1650.1	chr1	-	14479	36	NNC	ENSMUSG00000033671.19	novel	13307	38	NA	NA	-3	0	intron_retention	TRUE	canonical	0	0	junction_13	5.93268359967709	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCGGTGTAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	155848933	155720709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181_155736587_155737393_155739358_155741785_155741869_155744416_155744554_155747654_155747816_155751067_155751213_155754655_155754865_155761652_155761853_155770339_155770501_155773180_155773324_155776531_155776620_155777185_155777371_155778332_155778530_155782234_155782399_155784949_155786501_155786881_155787023_155787633_155787745_155790461_155790626_155791194_155791398_155798059_155798247_155800310_155800484_155802159_155802302_155803858_155804920_155807253_155807376_155808534_155809197_155811560_155811708_155816462_155816577_155819844_155819959_155828899_155829514_155834306_155834467_155835465_155835578_155838220_155838307_155848594
ES.1650.2	chr1	-	13268	38	NNC	ENSMUSG00000033671.19	novel	13307	38	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	5.48442245824584	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCGGTGTAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	155848956	155720709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181_155736587_155737393_155739358_155741785_155741869_155744416_155744554_155747654_155747816_155751067_155751213_155754655_155754865_155761652_155761853_155770339_155770501_155773180_155773328_155776531_155776620_155777185_155777371_155778332_155778530_155782234_155782399_155784949_155785082_155786363_155786501_155786881_155787023_155787633_155787745_155790461_155790626_155791194_155791398_155798059_155798247_155800310_155800484_155802159_155802302_155803858_155804920_155807253_155807376_155808534_155809197_155811560_155811708_155816462_155816577_155819844_155819959_155828899_155829514_155834306_155834467_155835465_155835578_155836889_155836934_155838220_155838307_155848594
ES.1650.3	chr1	-	7599	11	NIC	ENSMUSG00000033671.19	novel	13307	38	NA	NA	-138	-1	intron_retention	FALSE	canonical	3	13	junction_7	3	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATGTCCGGTGTAAAT	8617	False	NA	NA	False	AATAAA	-16	NA	155770481	155720710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_155724474_155733768_155733892_155735914_155736587_155737393_155739358_155741785_155741869_155744416_155744554_155747654_155747816_155751067_155751213_155754655_155754865_155761652_155761853_155770339
ES.1650.4	chr1	-	6327	27	ISM	ENSMUSG00000033671.19	ENSMUST00000138762.8	13307	38	44912	3568	-33746	1	3prime_fragment	FALSE	canonical	2	7	junction_18	5.13140925543321	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGTCCTGGGCCTTT	8960	False	NA	NA	False	AATAAA	-17	NA	155804089	155724277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181_155736587_155737393_155739358_155741785_155741869_155744416_155744554_155747654_155747816_155751067_155751213_155754655_155754865_155761652_155761853_155770339_155770501_155773180_155773328_155776531_155776620_155777185_155777371_155778332_155778530_155782234_155782399_155784949_155785076_155786363_155786501_155786881_155787023_155787633_155787745_155790461_155790626_155791194_155791398_155798059_155798247_155800310_155800484_155802159_155802302_155803858
ES.1650.5	chr1	-	5778	25	NNC	ENSMUSG00000033671.19	novel	13307	38	NA	NA	19	-28670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.73399361720576	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCCTGTGTTGCTTG	NA	False	NA	NA	False	AAGAAA	-33	NA	155848982	155773151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155773328_155776531_155776620_155777181_155777371_155778332_155778530_155782234_155782399_155784949_155785076_155786363_155786501_155786881_155787023_155787633_155787745_155790461_155790626_155791194_155791398_155798059_155798247_155800310_155800484_155802159_155802302_155803858_155804920_155807253_155807376_155808534_155809197_155811560_155811708_155816462_155816577_155819844_155819959_155828899_155829514_155834306_155834467_155835465_155835578_155838220_155838307_155848594
ES.1650.6	chr1	-	2916	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	155796571	155793655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155793700_155796600
ES.1650.7	chr1	-	3269	1	FSM	ENSMUSG00000033671.19	ENSMUST00000192899.2	3207	1	-66	4	5	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTTAATGTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	155848996	155845727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155845700_155849000
ES.16500.1	chr18	-	4136	7	NNC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	-13	1505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.421824690167	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCATTGAATGCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	40352409	40335443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_40336213_40336836_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.10	chr18	-	3037	5	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	42	-1535	intron_retention	FALSE	canonical	3	266	junction_1	23.9008368054342	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352440	40338483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.11	chr18	-	1791	7	NNC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	1	-1535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	137.00415646574	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352395	40338483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_40339454_40340739_40340922_40343800_40343947_40344856_40344942_40345095_40345269_40351798_40351919_40352280
ES.16500.14	chr18	-	1669	6	NNC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	40	-1535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.086199056241	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352351	40338483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_40339461_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.15	chr18	-	4674	6	NNC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	-13	-1539	intron_retention	FALSE	canonical	1	1	junction_3	145.842380671738	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACTCTGCTGTGAAGT	NA	False	NA	-12	True	ATTAAA	-9	NA	40352409	40338487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_40339454_40340739_40343947_40344856_40344936_40345095_40345269_40351798_40351919_40352280
ES.16500.16	chr18	-	1613	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	60	1655	-26	-1655	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	40352422	40338603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.2	chr18	-	3221	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	101	6	10	-6	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCATTGGTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	40352381	40336954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.3	chr18	-	3611	5	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	73	6	-13	-6	intron_retention	FALSE	canonical	3	266	junction_2	25.4803846124818	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCATTGGTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	40352409	40336954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798
ES.16500.4	chr18	-	2951	1	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	12481	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATTCCATTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	40339910	40336959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_40337000_40339900
ES.16500.5	chr18	-	2851	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	89	388	-2	-388	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATTTATACAGTGAAG	NA	False	NA	NA	False	AGTAAA	-15	NA	40352393	40337336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.6	chr18	-	2386	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	-25	967	-25	-967	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTTTTTGCTAGTACC	NA	False	NA	-4	True	AATAAA	-18	NA	40352507	40337915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.7	chr18	-	3268	6	NNC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	1	-971	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.086199056241	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCCAGTTTTTGCTAG	NA	False	NA	-8	True	AATAAA	-14	NA	40352395	40337919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_40340452_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16500.8	chr18	-	1933	5	NIC	ENSMUSG00000024487.6	novel	3328	6	NA	NA	-21	-1534	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	123.406847459936	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTGTGAAGTTTACT	NA	False	NA	-7	True	ATTAAA	-14	NA	40352417	40338482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351956
ES.16500.9	chr18	-	1836	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	-43	1535	-43	-1535	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGCTGTGAAGTTTAC	NA	False	NA	-8	True	ATTAAA	-13	NA	40352525	40338483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ES.16501.1	chr18	-	179	1	Intergenic	novelGene_13778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGAGGAATATT	NA	False	NA	NA	False	NA	NA	NA	40369706	40369527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_40369500_40369700
ES.16502.1	chr18	-	148	1	NIC	ENSMUSG00000117674.2	novel	647	4	NA	NA	15559	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	40375989	40375841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_40375800_40376000
ES.16503.1	chr18	+	1423	1	FSM	ENSMUSG00000051401.8	ENSMUST00000096572.2	723	1	-672	-28	-672	28	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACGGGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	40389342	40390765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_40389300_40390800
ES.16504.1	chr18	-	177	1	Intergenic	novelGene_13779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	40638864	40638687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_40638700_40638900
ES.16505.1	chr18	-	4720	1	Intergenic	novelGene_13780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	40846452	40841732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_40841700_40846500
ES.16506.1	chr18	-	681	3	Intergenic	novelGene_13781	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTTCCGAGTTA	9615	False	NA	NA	False	AATAAA	-9	NA	41989434	41985508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_41986072_41987275_41987349_41989389
ES.16507.1	chr18	-	5952	8	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	6	11766	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	124.950112493927	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	42084276	41996898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42001380_42008030_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.10	chr18	-	699	6	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	4	-11	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	142.526629090847	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGACATCTATGCTT	NA	False	NA	-25	True	AATAAA	-12	NA	42084255	42008675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42008919_42014277_42014351_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.12	chr18	-	1950	5	ISM	ENSMUSG00000056671.8	ENSMUST00000070949.6	651	6	-34	35251	-11	26380	5prime_fragment	FALSE	canonical	3	334	junction_2	26.3664085533089	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATAACACTGCTA	NA	False	NA	NA	False	NA	NA	NA	42084293	42044011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.13	chr18	-	1810	4	NIC	ENSMUSG00000056671.8	novel	651	6	NA	NA	10	26335	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	174.03128709772	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42084272	42044056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42045541_42065665_42065827_42070698_42070757_42084165
ES.16507.14	chr18	-	1853	1	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	38350	26335	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42045909	42044056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42044100_42045900
ES.16507.15	chr18	-	657	2	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	6	-11273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAGGGTGATGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	42084253	42081664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42082234_42084165
ES.16507.2	chr18	-	6077	9	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	4	11765	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.293561977676	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	42084278	41996899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42001380_42008030_42008919_42013670_42013795_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.3	chr18	-	4880	5	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	38756	11060	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.903810567666	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAGTGAACACTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	42045503	41997604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42001380_42008030_42008919_42009385_42009461_42014277_42014351_42045434
ES.16507.4	chr18	-	5268	8	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	8	11059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.950112493927	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGAGTGAACACTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	42084299	41997605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42001380_42008030_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.6	chr18	-	5357	9	NNC	ENSMUSG00000056671.8	novel	868	7	NA	NA	-6	11058	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.293561977676	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGAGTGAACACTCT	NA	False	NA	NA	False	AATAAA	-15	NA	42084265	41997606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42001380_42008030_42008919_42013670_42013795_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.7	chr18	-	860	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	8	0	8	0	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084299	42008664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ES.16507.8	chr18	-	780	6	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	138.005217292681	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTATGCTTTCTCCAAA	NA	False	NA	-17	True	AATAAA	-20	NA	42084296	42008667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42070698_42070757_42084165
ES.16507.9	chr18	-	4210	3	ISM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	34985	5	34937	-5	3prime_fragment	FALSE	canonical	3	300	junction_2	18	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCTATGCTTTCTCCA	NA	False	NA	-19	True	AATAAA	-18	NA	42049322	42008669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_42008919_42014277_42014351_42045434
ES.16508.1	chr18	+	126	1	Intergenic	novelGene_13782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCATGATCCCT	NA	False	NA	NA	False	NA	NA	NA	42105765	42105891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42105800_42105900
ES.16509.1	chr18	+	177	1	Intergenic	novelGene_13785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGTAGGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	42356493	42356670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42356500_42356700
ES.1651.1	chr1	+	200	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGTGTATTTGTAAAG	NA	False	NA	7	True	NA	NA	NA	155899491	155899691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155899500_155899700
ES.16510.1	chr18	+	1015	5	Antisense	novelGene_ENSMUSG00000024493.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	42369153	42376095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_42369721_42369799_42369891_42374966_42375194_42375768_42375834_42376030
ES.16510.2	chr18	+	142	1	Intergenic	novelGene_13786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAAAATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	42373065	42373207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42373100_42373200
ES.16511.1	chr18	+	155	1	Intergenic	novelGene_13787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42384765	42384920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42384800_42384900
ES.16512.1	chr18	+	175	1	Intergenic	novelGene_13789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGGTAGAAGAA	7921	False	NA	NA	False	NA	NA	NA	42406305	42406480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42406300_42406500
ES.16513.1	chr18	-	4515	4	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12959	13036	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCATCCTTCTATTCTT	NA	False	NA	NA	False	NA	NA	NA	42335407	42322326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42322339_42330377_42331834_42332154_42333212_42333417
ES.16513.100	chr18	-	3649	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	470.85784125006	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395193	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.103	chr18	-	3847	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	640.873840874125	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395167	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352915_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363004_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375839_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.104	chr18	-	2733	24	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	476.71103428381	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395201	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335651_42354618_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.105	chr18	-	3789	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	461.954709908064	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395192	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350602_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.108	chr18	-	5382	31	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_26	471.917823590318	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395182	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379003_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.11	chr18	-	3929	32	Fusion	ENSMUSG00000024493.10_ENSMUSG00000117662.2	novel	3980	32	NA	NA	1	5	multi-exon	FALSE	canonical	0	0	junction_31	461.780734126046	1680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTATTTATTTATTT	NA	False	NA	-3	True	AATAAA	-23	NA	42408242	42335406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42408015
ES.16513.110	chr18	-	3807	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	464.831414059289	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395189	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369674_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.111	chr18	-	3575	30	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	4964	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	575.140022241805	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42390192	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351746_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42390134
ES.16513.113	chr18	-	3820	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	461.780734126046	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395157	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395031
ES.16513.114	chr18	-	9600	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-3	intron_retention	FALSE	canonical	1	536	junction_18	335.692642956436	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395178	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.115	chr18	-	3722	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_30	468.962837902251	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395178	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42395025
ES.16513.116	chr18	-	3886	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	464.706347701613	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395193	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369749_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.117	chr18	-	3767	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	1	38	junction_8	467.644637162308	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395189	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.118	chr18	-	3731	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	463.414569770466	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395126	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361220_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.119	chr18	-	3980	28	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-5989	-4	intron_retention	FALSE	non_canonical	0	0	junction_11	485.794677961587	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42383946	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360382_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893
ES.16513.124	chr18	-	6545	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	536	junction_18	335.728175534614	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42395184	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.125	chr18	-	6528	30	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	3	junction_15	475.287178973962	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42395160	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366857_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.128	chr18	-	3693	31	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	510.215489333238	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42395117	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369643_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.131	chr18	-	3815	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	562.945351968386	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42395160	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360361_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379019_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.133	chr18	-	3844	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	677.391938001254	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTTGGGCCATGTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	42395186	42335415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351706_42352922_42353014_42354554_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363005_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369643_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.136	chr18	-	3846	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	403.630442136044	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395181	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368598_42369643_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.137	chr18	-	3776	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	463.544950264495	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395160	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376892_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.138	chr18	-	5763	7	NIC	ENSMUSG00000024493.10	novel	1759	13	NA	NA	-2575	-5	intron_retention	FALSE	canonical	3	1881	junction_4	170.190824272834	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42354286	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568
ES.16513.141	chr18	-	3821	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	464.909186302922	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395160	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362771_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.143	chr18	-	5085	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	557.898992793722	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395167	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350537_42350674_42351568_42351710_42352922_42353014_42353287_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.145	chr18	-	3846	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	561.158729475907	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395178	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366933_42367638_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375764_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.148	chr18	-	3796	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	464.699173164815	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTTTGGGCCATGTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	42395136	42335416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366871_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.150	chr18	-	3840	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	460.793269313632	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTTTGGGCCATGTTA	NA	False	NA	-14	True	AATAAA	-12	NA	42395182	42335417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358875_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.151	chr18	-	3456	27	ISM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	92	14120	-11	-1659	5prime_fragment	FALSE	canonical	1	536	junction_15	311.538518518513	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGCTGCTTACCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	42395167	42349482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.152	chr18	-	3315	1	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	925	2969	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1501	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGAAAGAAAGTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42377032	42373717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42373700_42377000
ES.16513.153	chr18	-	2444	10	ISM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	99	38361	-4	2963	5prime_fragment	FALSE	canonical	3	1504	junction_9	169.079205633862	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGTAAGAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	42395160	42373723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.154	chr18	-	3479	9	NIC	ENSMUSG00000024493.10	novel	1672	15	NA	NA	-11	2962	intron_retention	FALSE	canonical	3	1504	junction_8	172.440388250549	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGTAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	42395167	42373724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.155	chr18	-	3115	9	NIC	ENSMUSG00000024493.10	novel	1672	15	NA	NA	34	2926	intron_retention	FALSE	canonical	3	1504	junction_8	165.268295129465	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42395122	42373760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42375194_42375768_42375837_42376031_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.156	chr18	-	3092	3	NIC	ENSMUSG00000024493.10	novel	1672	15	NA	NA	-11	-2517	intron_retention	FALSE	canonical	3	1504	junction_2	132	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGGGGTACAATGGG	NA	False	NA	NA	False	NA	NA	NA	42395167	42381620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42384446_42390134_42390260_42395025
ES.16513.157	chr18	-	7550	1	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5971	-2532	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATTGAAAAAAAATAGTT	NA	False	NA	NA	False	NA	NA	NA	42389185	42381635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42381600_42389200
ES.16513.158	chr18	-	1058	2	FSM	ENSMUSG00000024493.10	ENSMUST00000237520.2	452	2	-43	-563	-5	563	multi-exon	FALSE	canonical	3	1504	junction_1	0	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACCACTCACAAAATACAA	NA	False	NA	NA	False	AAAACA	-4	NA	42395199	42389375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_42390260_42395025
ES.16513.159	chr18	-	206	1	Intergenic	novelGene_13788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATGTTAGCATCGAAA	NA	False	NA	NA	False	NA	NA	NA	42392709	42392503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42392500_42392700
ES.16513.19	chr18	-	3817	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	604.406634487656	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCATGTTATTTATTTAT	NA	False	NA	-5	True	AATAAA	-21	NA	42395155	42335408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369643_42369725_42369803_42369892_42374980_42375194_42375768_42375837_42376031_42376096_42376841_42376951_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.2	chr18	-	170	1	Intergenic	novelGene_13783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGGAGTTCAGATA	NA	False	NA	NA	False	NA	NA	NA	42324532	42324362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42324400_42324500
ES.16513.20	chr18	-	5820	31	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	3	intron_retention	FALSE	canonical	0	0	junction_24	466.799177615195	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCATGTTATTTATTTAT	NA	False	NA	-5	True	AATAAA	-21	NA	42395160	42335408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376837_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.21	chr18	-	3919	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	453.681041032922	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCATGTTATTTATTTAT	NA	False	NA	-5	True	AATAAA	-21	NA	42395160	42335408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344143_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.24	chr18	-	5757	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	2	intron_retention	FALSE	canonical	1	38	junction_7	471.0917923434	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCATGTTATTTATTTA	NA	False	NA	-6	True	AATAAA	-20	NA	42395193	42335409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.25	chr18	-	3944	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	464.937387390548	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCATGTTATTTATTTA	NA	False	NA	-6	True	AATAAA	-20	NA	42395171	42335409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354827_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.29	chr18	-	3849	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	403.630442136044	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCATGTTATTTATTTA	NA	False	NA	-6	True	AATAAA	-20	NA	42395182	42335409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369654_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.3	chr18	-	3486	30	Fusion	ENSMUSG00000024493.10_ENSMUSG00000059455.4	novel	1672	15	NA	NA	-6492	0	multi-exon	FALSE	canonical	0	0	junction_1	464.704672688013	1743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTAGTGTCTCAAGCC	NA	False	NA	NA	False	AGTAAA	-20	NA	42384449	42325502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_42325785_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357
ES.16513.31	chr18	-	6835	30	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	7	2	intron_retention	FALSE	non_canonical	0	0	junction_6	472.466848266689	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCATGTTATTTATTTA	NA	False	NA	-6	True	AATAAA	-20	NA	42395149	42335409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350676_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.32	chr18	-	3817	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	518.135171737518	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCATGTTATTTATTTA	NA	False	NA	-6	True	AATAAA	-20	NA	42395160	42335409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368589_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377974_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.34	chr18	-	3547	29	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	13	junction_28	480.631911590123	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCCATGTTATTTATTT	NA	False	NA	-7	True	AATAAA	-19	NA	42395168	42335410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42395025
ES.16513.37	chr18	-	3824	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	460.261634412844	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCCATGTTATTTATTT	NA	False	NA	-7	True	AATAAA	-19	NA	42395154	42335410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367780_42368545_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.38	chr18	-	3842	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	561.158729475907	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395182	42335411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366933_42367641_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375774_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.4	chr18	-	4544	3	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12959	5011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTCAGAAGTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	42335407	42330351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42331834_42332138_42333212_42333418
ES.16513.43	chr18	-	3865	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	459.509159924055	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGCCATGTTATTTAT	NA	False	NA	-9	True	AATAAA	-17	NA	42395179	42335412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344339_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.5	chr18	-	4571	3	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12960	4981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42335406	42330381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42331867_42332114_42333212_42333417
ES.16513.51	chr18	-	7979	28	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	487.111136455798	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395164	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367643_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.52	chr18	-	3811	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	562.824098329816	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395160	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345673_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383907_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.53	chr18	-	3895	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	464.634207662631	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395189	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351746_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.54	chr18	-	7582	29	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_23	472.469602736731	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395181	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42345678_42347824_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376951_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.57	chr18	-	3749	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_29	467.541365965504	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395167	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42390134_42390260_42395025
ES.16513.59	chr18	-	3232	27	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	499.788288018273	1668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42377953	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362916_42363009_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813
ES.16513.6	chr18	-	176	1	Intergenic	novelGene_13784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	42333407	42333231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42333200_42333400
ES.16513.61	chr18	-	3707	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	463.958797260657	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395178	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.64	chr18	-	3866	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	463.004545503743	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395160	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369928_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.67	chr18	-	3820	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_16	462.321867149882	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395189	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363045_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.69	chr18	-	3794	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	463.414569770466	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395136	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361734_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.7	chr18	-	4470	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	92	-582	-11	582	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACTACTGTCCCCATAT	NA	False	NA	NA	False	AATAAA	-39	NA	42395167	42334780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.70	chr18	-	4371	31	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	2	junction_7	467.441952427132	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395160	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350674_42351568_42351746_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.72	chr18	-	3782	33	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	101	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	552.971673664212	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGGCCATGTTATTTA	NA	False	NA	-10	True	AATAAA	-16	NA	42395055	42335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42390792_42390850_42395025
ES.16513.74	chr18	-	5480	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	464.937387390548	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395160	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42357167_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.75	chr18	-	4850	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12	-3	intron_retention	FALSE	canonical	1	536	junction_19	321.292694525654	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395171	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.77	chr18	-	882	1	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	12070	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1660	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42336296	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335400_42336300
ES.16513.78	chr18	-	3721	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	466.528623630605	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395193	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.79	chr18	-	5888	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	3	-3	intron_retention	FALSE	canonical	1	536	junction_18	335.746096241636	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395153	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.8	chr18	-	4021	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	-25	-16	-25	16	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	1680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAAGTGTCAGGATGC	NA	False	NA	57	True	AATAAA	-33	NA	42395284	42335346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.82	chr18	-	3569	30	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-6482	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	477.240457443798	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42384439	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360365_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357
ES.16513.84	chr18	-	3947	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	536	junction_20	333.721915172898	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395199	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.89	chr18	-	7610	13	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-1527	-3	intron_retention	FALSE	canonical	3	1461	junction_9	244.933820426843	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42365117	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693
ES.16513.91	chr18	-	5798	29	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	38	junction_7	479.354363563478	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395160	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.93	chr18	-	3785	32	NNC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_16	462.943046505736	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395143	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363033_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.94	chr18	-	5616	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	1	-3	intron_retention	FALSE	canonical	1	536	junction_18	328.961100237823	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395193	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42345678_42347824_42347936_42349916_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.95	chr18	-	2898	6	NNC	ENSMUSG00000024493.10	novel	1071	5	NA	NA	-3106	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	900.080129766234	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42366696	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42349341_42366017
ES.16513.96	chr18	-	6940	15	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-2185	-3	intron_retention	FALSE	canonical	3	1461	junction_10	236.925125949365	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42365775	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855
ES.16513.97	chr18	-	4865	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	536	junction_20	332.588227225332	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395167	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16513.98	chr18	-	5889	30	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	536	junction_19	335.1770398432	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGGCCATGTTATTT	NA	False	NA	-11	True	AATAAA	-15	NA	42395160	42335414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ES.16514.1	chr18	+	3588	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	-27	2705	-27	-2594	multi-exon	TRUE	canonical	3	13	junction_8	26.3045239044415	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAACTCTTAGCTATT	NA	False	NA	25	True	ATTAAA	-19	NA	42408390	42471902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.10	chr18	+	3913	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	22	2331	3	-2220	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTCATTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-20	NA	42408439	42472276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.12	chr18	+	6299	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	4	-2	4	2	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCACAATTGGGGGGAA	NA	False	NA	4	True	AATAAA	-15	NA	42408440	42474498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.13	chr18	+	4370	21	NNC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	7	-1873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.3222086003193	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAGATGACCTTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	42408443	42472623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455223_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.14	chr18	+	3557	20	NIC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	17	-2607	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	27.7929623009604	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGCCTGGAATCTTTTA	NA	False	NA	12	True	ATTAAA	-6	NA	42408453	42471889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.15	chr18	+	6385	21	NNC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	28.3398570920885	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAGCTGTAATTCTGG	NA	False	NA	14	True	NA	NA	NA	42408453	42474602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447194_42450663_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.16	chr18	+	6251	20	NIC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	19	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.0151359869895	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATAACAATCACTA	NA	False	NA	-4	True	TTTAAA	-30	NA	42408455	42474584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42408658_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.18	chr18	+	3315	19	NIC	ENSMUSG00000024491.17	novel	6266	20	NA	NA	23	-2609	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	35.7634546899209	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCGCCTGGAATCTTT	NA	False	NA	10	True	ATTAAA	-4	NA	42408459	42471887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42470027_42470139_42471456
ES.16514.2	chr18	+	6295	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	-27	-2	-27	2	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAATTCTGGCTTGTTC	NA	False	NA	21	True	ACTAAA	-4	NA	42408390	42474609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.20	chr18	+	6114	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	43	109	24	2	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCACAATTGGGGGGAA	NA	False	NA	4	True	AATAAA	-15	NA	42408460	42474498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.21	chr18	+	6081	20	NIC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	25	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	27.6308270574392	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCACTAAAAGAGCTGTA	NA	False	NA	7	True	TTTAAA	-41	NA	42408461	42474595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.22	chr18	+	2624	6	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	36	39273	36	2926	intron_retention	FALSE	canonical	3	108	junction_1	5.56417109729742	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTTTATAGTACCTG	NA	False	NA	NA	False	AATAAA	-17	NA	42408472	42435223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314
ES.16514.23	chr18	+	4488	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	84	1729	84	-1729	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTGTTCTGAATGT	NA	False	NA	NA	False	AGTAAA	-18	NA	42408520	42472767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.24	chr18	+	4156	13	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	38689	614	14940	-614	3prime_fragment	FALSE	canonical	3	101	junction_8	9.74964386813978	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGAATATGTGTATGTG	6145	False	NA	NA	False	TATAAA	-20	NA	42447125	42473882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.25	chr18	+	2330	11	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	44422	2223	20673	-2223	3prime_fragment	FALSE	canonical	3	101	junction_6	10.3966340706981	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTGCTCATTCCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	42452858	42472273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.26	chr18	+	5884	8	NIC	ENSMUSG00000024491.17	novel	6266	20	NA	NA	22947	-8	intron_retention	FALSE	canonical	3	101	junction_3	10.6502850397805	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATAACAATCACTA	NA	False	NA	-4	True	TTTAAA	-30	NA	42455132	42474584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42455274_42457119_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.27	chr18	+	178	1	Intergenic	novelGene_13792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42464055	42464233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42464100_42464200
ES.16514.3	chr18	+	4121	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-42	2222	-23	-2222	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTGCTCATTCCCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	42408394	42472274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.4	chr18	+	6454	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-38	-115	-19	4	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGGCTTGTTCTG	NA	False	NA	23	True	ACTAAA	-6	NA	42408398	42474611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.5	chr18	+	3743	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-38	2596	-19	-2596	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTAACTCTTAGCTA	NA	False	NA	23	True	ATTAAA	-17	NA	42408398	42471900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.6	chr18	+	6297	20	NIC	ENSMUSG00000024491.17	novel	6301	21	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	27.7929623009604	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAACAATCACTAAAAGA	NA	False	NA	1	True	TTTAAA	-35	NA	42408413	42474589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.7	chr18	+	4424	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	-2	1844	-2	-1733	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCCTTGTGTTCTGA	NA	False	NA	NA	False	AGTAAA	-14	NA	42408415	42472763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16514.8	chr18	+	9002	7	ISM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	-8	31727	-8	10472	intron_retention	FALSE	canonical	3	82	junction_6	13.3749350984926	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGTGTAATGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	42408428	42442769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787
ES.16514.9	chr18	+	4422	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	2	1877	2	-1877	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGATTAGATGACCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	42408438	42472619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ES.16515.1	chr18	-	3879	1	Antisense	novelGene_ENSMUSG00000024491.17_AS_novelGene_ENSMUSG00002075016.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATAAACACTCAAGTT	NA	False	NA	NA	False	AAGAAA	-44	NA	42435135	42431256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_42431300_42435100
ES.16516.1	chr18	-	201	1	Intergenic	novelGene_13790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTATGTATCTC	NA	False	NA	NA	False	NA	NA	NA	42440414	42440213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42440200_42440400
ES.16517.1	chr18	-	139	1	Intergenic	novelGene_13791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTTACATCTATACTCT	NA	False	NA	NA	False	NA	NA	NA	42461618	42461479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42461500_42461600
ES.16518.1	chr18	-	234	1	Intergenic	novelGene_13793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAGACAGGGACACAAGA	NA	False	NA	NA	False	NA	NA	NA	42478976	42478742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42478700_42479000
ES.16519.1	chr18	+	181	1	Intergenic	novelGene_13794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGTTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42496242	42496423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42496200_42496400
ES.1652.1	chr1	+	5359	1	Antisense	novelGene_ENSMUSG00000102964.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	155900275	155905634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_155900300_155905600
ES.16520.1	chr18	+	2570	2	FSM	ENSMUSG00000024497.5	ENSMUST00000025374.4	2360	2	-170	-40	-170	40	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGTCGTTTTCCTTT	3202	False	NA	NA	False	AATAAA	-20	NA	42527433	42530354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42527828_42528178
ES.16521.1	chr18	+	201	1	Intergenic	novelGene_13795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTCTTCAGGCAGGAAT	3596	False	NA	NA	False	NA	NA	NA	42557006	42557207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42557000_42557200
ES.16522.1	chr18	+	4324	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	-172	-51	-158	51	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644393	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.10	chr18	+	4355	23	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	50	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	239.64764078859	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644556	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.102	chr18	+	4016	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	180.82096731912	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644575	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657127_42657251_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.103	chr18	+	7154	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	40	intron_retention	FALSE	canonical	3	105	junction_19	193.194332215001	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCGTAGACCTGTTT	NA	False	NA	9	True	AATATA	-7	NA	42644575	42708659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.104	chr18	+	4132	21	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	10	49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	184.536744308552	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644575	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707590
ES.16522.105	chr18	+	6587	21	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	50	intron_retention	FALSE	canonical	3	436	junction_6	87.0577394606591	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644575	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.106	chr18	+	4161	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	167.243613641463	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATTGTTACACAATAT	NA	False	NA	-18	True	AATAAA	-30	NA	42644575	42708632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681467_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.108	chr18	+	6734	20	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	50	intron_retention	FALSE	canonical	3	436	junction_6	89.2969461870783	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644575	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.109	chr18	+	5419	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	1008	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	167.986434502524	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATAGACTGGAAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	42644575	42709866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655960_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.11	chr18	+	6282	20	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-5	51	intron_retention	FALSE	canonical	3	436	junction_6	90.4765469067327	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644558	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.111	chr18	+	4222	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	10	50	combination_of_known_junctions	FALSE	canonical	3	26	junction_12	179.991916485158	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644575	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.112	chr18	+	4046	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	164.941117717959	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644575	42708619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657066_42657173_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.113	chr18	+	4390	24	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	272.068350135692	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644575	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42678146_42678267_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700961_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.114	chr18	+	4070	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	166.954404681729	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644575	42708619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663796_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.115	chr18	+	7397	20	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	49	intron_retention	FALSE	canonical	3	105	junction_18	208.072475653686	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644575	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.117	chr18	+	3489	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	10	602	10	108	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTCGAAGCTAAAAGTCA	NA	False	NA	NA	False	AGTAAA	-6	NA	42644575	42708017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.118	chr18	+	4484	23	FSM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	-12	-946	10	-3	multi-exon	FALSE	canonical	3	105	junction_21	184.268556260818	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTATTCTCCCTTTCTTTT	NA	False	NA	NA	False	TATAAA	-22	NA	42644575	42708855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.119	chr18	+	4045	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	164.941117717959	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644575	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657144_42657251_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.121	chr18	+	4011	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-7	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.82096731912	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTCGTAGACCTGTT	NA	False	NA	8	True	AATATA	-6	NA	42644580	42708658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657072_42657185_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.123	chr18	+	4193	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-7	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	165.471044798378	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644580	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668155_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.124	chr18	+	4027	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-6	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.82096731912	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644581	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657066_42657173_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.125	chr18	+	5509	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	14	junction_11	264.56711745262	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644581	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.127	chr18	+	4050	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-1	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	167.243613641463	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644586	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671055_42681535_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.128	chr18	+	4236	24	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	265.254630315084	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGTAAATGATTATT	NA	False	NA	11	True	AATAAA	-18	NA	42644598	42708620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42696379_42696433_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.13	chr18	+	4387	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-5	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	243.627073262489	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644558	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684140_42684226_42685556_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.130	chr18	+	4162	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-4573	50	combination_of_known_junctions	FALSE	canonical	3	105	junction_19	203.32596366426	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42652430	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.131	chr18	+	4204	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-4573	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	252.569677865081	948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42652430	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669915_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42696670_42696734_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.134	chr18	+	3948	21	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-997	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.876786114928	948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42656006	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42656132_42656957_42657418_42662974_42663049_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.135	chr18	+	3808	20	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-26	49	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	223.825231088951	948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42656977	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42657418_42662134_42662214_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.137	chr18	+	8118	11	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-30	50	intron_retention	FALSE	canonical	3	632	junction_5	54.8132283303948	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42669327	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42669444_42669926_42670040_42671032_42671122_42681461_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707582
ES.16522.138	chr18	+	5369	17	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_4	311.61996084975	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42669414	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42669444_42669915_42670040_42671032_42671122_42678146_42678267_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.139	chr18	+	2730	15	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	25359	5	524	-5	3prime_fragment	FALSE	canonical	3	605	junction_5	56.7609110251779	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGTGGATTGTAAATG	NA	False	NA	5	True	AATAAA	-12	NA	42669924	42708614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.14	chr18	+	4941	20	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-5	53	intron_retention	FALSE	canonical	3	254	junction_5	113.495823443236	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTTTATTTTTTCTT	NA	False	NA	22	True	AATATA	-20	NA	42644558	42708672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.140	chr18	+	2702	14	NNC	ENSMUSG00000024498.17	novel	724	5	NA	NA	-6563	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	193.675963140047	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42679009	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42679183_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.141	chr18	+	8330	14	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-4098	5803	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	195.203883703726	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGTTTTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	42681474	42714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582_42714131_42714360
ES.16522.142	chr18	+	9258	10	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-4094	51	intron_retention	FALSE	canonical	3	625	junction_7	52.7004111305911	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42681478	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42682960_42683106_42685693_42686472_42686563_42693998_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.143	chr18	+	3937	13	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-4050	51	intron_retention	FALSE	canonical	1	1	junction_3	202.525307060624	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42681522	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42681623_42682902_42682960_42683106_42683174_42684140_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.144	chr18	+	5681	11	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-3554	46	intron_retention	FALSE	canonical	0	0	junction_4	221.808047644805	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGACCTGTTTTTTATT	NA	False	NA	15	True	AATATA	-13	NA	42682018	42708665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697149_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.145	chr18	+	5480	11	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-3107	49	intron_retention	FALSE	canonical	3	105	junction_9	249.202427757034	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42682465	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.146	chr18	+	3582	12	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-2986	-4	intron_retention	FALSE	canonical	0	0	junction_1	287.779730964012	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGGATTGTAAATGA	NA	False	NA	6	True	AATAAA	-13	NA	42682586	42708615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42682960_42683080_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.147	chr18	+	5884	10	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-2971	50	intron_retention	FALSE	canonical	3	625	junction_7	59.5315042645489	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42682601	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.149	chr18	+	3745	12	Fusion	ENSMUSG00002076197.1_ENSMUSG00000024498.17	novel	724	5	NA	NA	-1916	49	multi-exon	FALSE	non_canonical	0	0	junction_1	328.845664521186	942	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42683656	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_42685011_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704886_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.15	chr18	+	7322	19	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	-5	51	intron_retention	FALSE	canonical	3	254	junction_5	115.277563587485	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644558	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.150	chr18	+	3136	10	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-133	50	intron_retention	FALSE	canonical	3	105	junction_8	262.44914851368	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42685439	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.151	chr18	+	7149	1	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	8130	627	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	916	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTCTGTAATGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	42694576	42701725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42694600_42701700
ES.16522.16	chr18	+	4143	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.435821161474	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644559	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644606_42652412_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.17	chr18	+	4892	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	105	junction_20	188.604770982041	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644559	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.18	chr18	+	5173	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-4	50	intron_retention	FALSE	canonical	1	2	junction_4	252.138199183708	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644559	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42662134_42662214_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.19	chr18	+	7281	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-4	50	intron_retention	FALSE	canonical	3	105	junction_19	204.0745635791	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644559	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.2	chr18	+	4397	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	-158	178	-158	61	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTTCTTTGTTTGCT	NA	False	NA	30	True	AATATA	-28	NA	42644393	42708680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.20	chr18	+	5092	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-4	48	intron_retention	FALSE	canonical	3	105	junction_20	187.379760388294	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644559	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.21	chr18	+	5001	21	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	-4	51	intron_retention	FALSE	canonical	3	436	junction_6	88.1976615336257	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644559	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.22	chr18	+	5570	22	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	11	junction_18	228.022117716244	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGTGGATTGTAAATG	NA	False	NA	5	True	AATAAA	-12	NA	42644560	42708614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704792_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.25	chr18	+	4345	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	-5	-239	-3	0	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCCTTTCTTTTGTG	NA	False	NA	NA	False	TATAAA	-25	NA	42644560	42708858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.26	chr18	+	4073	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-3	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.941117717959	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644560	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657060_42657203_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.27	chr18	+	5609	20	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	-2	51	intron_retention	FALSE	canonical	0	0	junction_5	237.172202712738	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644561	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669292_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.29	chr18	+	4358	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	1	51	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	210.954579733989	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644564	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707582
ES.16522.30	chr18	+	2125	14	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	1	14576	1	-3212	5prime_fragment	FALSE	canonical	3	254	junction_5	125.043661013917	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAACAAAATAAT	NA	False	NA	-24	True	NA	NA	NA	42644566	42694043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998
ES.16522.31	chr18	+	4204	22	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	239.024462927021	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644566	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669915_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.32	chr18	+	6028	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	1	49	intron_retention	FALSE	canonical	1	1	junction_12	168.354218412082	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644566	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42684990_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.33	chr18	+	4229	22	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	1	48	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	165.305338314537	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644566	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.35	chr18	+	4148	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	2	46	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	164.941117717959	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGACCTGTTTTTTATT	NA	False	NA	15	True	AATATA	-13	NA	42644567	42708665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657138_42657197_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.37	chr18	+	7620	21	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	2	49	intron_retention	FALSE	canonical	0	0	junction_2	221.5674784349	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644567	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42645083_42645330_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.38	chr18	+	6625	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	2	49	intron_retention	FALSE	canonical	3	105	junction_19	204.041319344882	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644567	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.39	chr18	+	7372	20	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	3	48	intron_retention	FALSE	canonical	3	436	junction_6	88.8584731741866	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644568	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.4	chr18	+	7576	20	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	1	-3	intron_retention	FALSE	canonical	3	436	junction_6	88.8584731741866	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTATTCTCCCTTTCTTTT	NA	False	NA	NA	False	TATAAA	-22	NA	42644552	42708855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.40	chr18	+	4385	22	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	220.780433915689	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTATTCTCCCTTTCTTTT	NA	False	NA	NA	False	TATAAA	-22	NA	42644568	42708855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.42	chr18	+	4031	21	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	4	51	combination_of_known_splicesites	FALSE	canonical	1	3	junction_18	167.510029550472	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644569	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704888_42704973_42706324_42706426_42707582
ES.16522.43	chr18	+	4970	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	4	-1	intron_retention	FALSE	canonical	3	105	junction_19	202.827087688011	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644569	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.44	chr18	+	5532	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	-1	intron_retention	FALSE	canonical	3	105	junction_20	188.158060636033	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644570	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.45	chr18	+	4238	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	48	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	199.165913811801	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644570	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.46	chr18	+	4405	24	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	265.285222972201	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACCTGTTTTTTATTT	NA	False	NA	16	True	AATATA	-14	NA	42644570	42708666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42662134_42662214_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42678146_42678267_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.47	chr18	+	984	4	ISM	ENSMUSG00000024498.17	ENSMUST00000236088.2	2365	16	7	39777	5	-11872	5prime_fragment	FALSE	canonical	3	655	junction_3	28.6006992921502	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTCTGATATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	42644570	42657482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957
ES.16522.48	chr18	+	4242	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	5	50	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	161.602364657942	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644570	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668246_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.49	chr18	+	5596	20	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_2	247.708422553368	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644570	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655980_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.51	chr18	+	4388	24	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	250.845089605529	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644570	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684140_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.52	chr18	+	6669	21	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	5	48	intron_retention	FALSE	canonical	3	7	junction_17	230.683094309054	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644570	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707582
ES.16522.53	chr18	+	3942	21	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	171.127868858348	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644570	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671068_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.55	chr18	+	6685	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	49	intron_retention	FALSE	canonical	3	105	junction_20	188.547052296516	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644570	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.56	chr18	+	4197	22	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	5	50	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	220.780433915689	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644570	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.57	chr18	+	4149	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	214.785966342935	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644570	42708619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685691_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704965_42706324_42706426_42707582
ES.16522.58	chr18	+	6612	21	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	5	49	intron_retention	FALSE	canonical	3	436	junction_6	82.063024560395	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644570	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.6	chr18	+	4278	23	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	2	51	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	206.472578372613	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644553	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.61	chr18	+	4034	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	164.941117717959	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644570	42708619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657127_42657251_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.62	chr18	+	4399	23	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	-49	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	206.472578372613	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGCTGTATTTCTAAT	NA	False	NA	NA	False	AATATA	-18	NA	42644571	42708809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.63	chr18	+	3562	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	20	835	6	114	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTAAAAGTCATCCTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	42644571	42708023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.64	chr18	+	4839	21	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	6	48	intron_retention	FALSE	canonical	0	0	junction_4	184.494823775628	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644571	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657168_42657251_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.69	chr18	+	8429	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	13	intron_retention	FALSE	canonical	0	0	junction_4	304.284936061662	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATTGTTACACAATAT	NA	False	NA	-18	True	AATAAA	-30	NA	42644571	42708632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42660511_42662214_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.7	chr18	+	7964	19	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	4	-2	intron_retention	FALSE	canonical	3	436	junction_6	90.2632808873199	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644555	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707582
ES.16522.70	chr18	+	4290	22	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	6	51	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	163.299746650862	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644571	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.71	chr18	+	4329	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	262.756981648364	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644571	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.72	chr18	+	1747	9	NNC	ENSMUSG00000024498.17	novel	2365	16	NA	NA	6	3201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	257.576080993558	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATATTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	42644571	42672555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42672372
ES.16522.73	chr18	+	4236	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	225.143672949936	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644571	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707582
ES.16522.74	chr18	+	5063	22	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2	junction_6	226.525586346976	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644571	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668246_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.76	chr18	+	4053	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	45	at_least_one_novel_splicesite	TRUE	canonical	1	36	junction_4	158.550465152266	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAGACCTGTTTTTTAT	NA	False	NA	14	True	AATATA	-12	NA	42644571	42708664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657114_42657263_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.77	chr18	+	4354	24	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	6	51	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	247.264443671082	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644571	42708670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.78	chr18	+	4164	21	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	6	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	185.095786013621	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644571	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682881_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.79	chr18	+	4126	21	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	6	49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	185.032287722981	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644571	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683178_42685578_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.8	chr18	+	4317	23	FSM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	-31	-760	5	50	multi-exon	FALSE	canonical	3	105	junction_21	184.268556260818	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644556	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.80	chr18	+	5423	20	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	7	49	intron_retention	FALSE	canonical	3	254	junction_5	113.927201327058	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644572	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.82	chr18	+	4641	25	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	7	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	288.670792407006	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644572	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684140_42684226_42684835_42685011_42685556_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.83	chr18	+	5170	21	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	7	-6	intron_retention	FALSE	canonical	3	436	junction_6	88.1976615336257	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTATTCTCCCTTTCT	NA	False	NA	NA	False	TATAAA	-19	NA	42644572	42708852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.84	chr18	+	2305	15	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	7	11360	7	0	5prime_fragment	FALSE	canonical	3	254	junction_5	120.72755632888	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAAAGAAGATTC	NA	False	NA	NA	False	NA	NA	NA	42644572	42697259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147
ES.16522.85	chr18	+	6831	18	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	7	48	intron_retention	FALSE	canonical	3	254	junction_5	119.26847386519	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644572	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704973_42706324_42706426_42707582
ES.16522.86	chr18	+	6544	20	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	7	49	intron_retention	FALSE	canonical	3	9	junction_4	186.396993900599	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644572	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.88	chr18	+	3983	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	180.82096731912	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644574	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657121_42657228_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.9	chr18	+	4413	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	5	-1	5	1	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCCCTTTCTTTTGTGT	NA	False	NA	NA	False	TATAAA	-26	NA	42644556	42708859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.91	chr18	+	7396	20	NNC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	9	-1	intron_retention	FALSE	canonical	3	7	junction_16	235.433318893969	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644574	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707582
ES.16522.92	chr18	+	6051	22	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	9	49	intron_retention	FALSE	canonical	1	1	junction_11	239.298701377015	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTGTTTTTTATTTTT	NA	False	NA	18	True	AATATA	-16	NA	42644574	42708668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42684990_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.93	chr18	+	9046	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	222.775398325698	949	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGTAAATGATTATT	NA	False	NA	11	True	AATAAA	-18	NA	42644574	42708620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42662214_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.94	chr18	+	4266	23	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	221.936760406731	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGATTGTAAATGATTA	NA	False	NA	9	True	AATAAA	-16	NA	42644574	42708618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.95	chr18	+	6763	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	9	50	intron_retention	FALSE	canonical	3	26	junction_12	226.308450437073	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTTTATTTTTT	NA	False	NA	19	True	AATATA	-17	NA	42644574	42708669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685774_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.96	chr18	+	4108	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	181.876579030946	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGATTGTAAATGATT	NA	False	NA	8	True	AATAAA	-15	NA	42644574	42708617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16522.97	chr18	+	7411	21	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	10	0	intron_retention	FALSE	canonical	3	105	junction_19	191.970642286783	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644575	42708619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ES.16522.98	chr18	+	2320	4	ISM	ENSMUSG00000024498.17	ENSMUST00000236088.2	2365	16	12	38436	10	-10531	5prime_fragment	FALSE	canonical	3	655	junction_3	28.6006992921502	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAAATCTGG	NA	False	NA	NA	False	NA	NA	NA	42644575	42658823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957
ES.16522.99	chr18	+	4210	22	NNC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	10	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	165.471044798378	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTGTTTTTTATTTT	NA	False	NA	17	True	AATATA	-15	NA	42644575	42708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663964_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ES.16523.1	chr18	-	156	1	Intergenic	novelGene_13796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	42653170	42653014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42653000_42653200
ES.16524.1	chr18	-	220	1	Intergenic	novelGene_13797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAATGTTTGC	NA	False	NA	NA	False	NA	NA	NA	42653729	42653509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42653500_42653700
ES.16525.1	chr18	+	174	1	Intergenic	novelGene_13798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	42717420	42717594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_42717400_42717600
ES.16526.1	chr18	-	178	1	Intergenic	novelGene_13799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	42754480	42754302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_42754300_42754500
ES.16527.1	chr18	-	175	1	Intergenic	novelGene_13800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43241427	43241252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_43241300_43241400
ES.16528.1	chr18	-	5199	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	207	-3300	207	-4	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTTCTCCAGTCGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	43526235	43454052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
ES.16528.2	chr18	-	1969	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	284	-147	284	86	multi-exon	FALSE	canonical	1	1	junction_3	2.11223541811477	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTCTCAATTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	43526158	43457205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
ES.16529.1	chr18	-	5207	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-61	-2767	-61	2767	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAAAGATTTAAGACGG	NA	False	NA	NA	False	AATAAA	-33	NA	43610922	43605715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43605700_43610900
ES.16529.10	chr18	-	1018	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	459	902	459	-902	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCATTGCCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	43610402	43609384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43609400_43610400
ES.16529.11	chr18	-	1390	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-53	1042	-53	-1042	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCTTATCTCAGAGT	NA	False	NA	NA	False	ATTAAA	-12	NA	43610914	43609524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43609500_43610900
ES.16529.12	chr18	-	1103	1	FSM	ENSMUSG00002076479.1	ENSMUST00020182936.1	74	1	-55	-974	-55	974	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAACCTAAT	NA	False	NA	NA	False	ACTAAA	-10	NA	43610897	43609794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43609800_43610900
ES.16529.2	chr18	-	5078	2	Genic_Genomic	ENSMUSG00000043424.11	novel	2379	1	NA	NA	-9	2767	multi-exon	FALSE	non_canonical	0	0	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAAAGATTTAAGACGG	NA	False	NA	NA	False	AATAAA	-33	NA	43610870	43605715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_43609704_43609780
ES.16529.3	chr18	-	3015	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-39	-597	-39	597	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAATGTAGTACTACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	43610900	43607885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43607900_43610900
ES.16529.4	chr18	-	2525	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-42	-104	-42	104	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCACAAACGACTAGTGCA	NA	False	NA	NA	False	AAAACA	-39	NA	43610903	43608378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43608400_43610900
ES.16529.5	chr18	-	2434	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-57	2	-57	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCAGGTACAGGCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	43610918	43608484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43608500_43610900
ES.16529.6	chr18	-	1844	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-61	596	-61	-596	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCAAGAGATAGTTGAG	NA	False	NA	NA	False	AATAAA	-33	NA	43610922	43609078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43609100_43610900
ES.16529.7	chr18	-	1650	2	Genic_Genomic	ENSMUSG00000043424.11	novel	2379	1	NA	NA	-29	-611	multi-exon	FALSE	non_canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTTGTGTTATATCC	NA	False	NA	NA	False	AATAAA	-18	NA	43610890	43609093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_43610504_43610650
ES.16529.8	chr18	-	1710	2	Genic_Genomic	ENSMUSG00000043424.11	novel	2379	1	NA	NA	-35	-635	multi-exon	FALSE	non_canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAAATCACTATTGTGA	NA	False	NA	NA	False	TATAAA	-11	NA	43610896	43609117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_43609703_43609771
ES.16529.9	chr18	-	1699	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	-30	710	-30	-710	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTACCTACAGTTTGG	NA	False	NA	NA	False	TATAAA	-19	NA	43610891	43609192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_43609200_43610900
ES.1653.1	chr1	+	1554	1	Antisense	novelGene_ENSMUSG00000026466.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-37	NA	155909531	155911085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_155909500_155911100
ES.16530.1	chr18	-	183	1	Intergenic	novelGene_13801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATACAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	43666526	43666343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_43666300_43666500
ES.16531.1	chr18	-	175	1	Intergenic	novelGene_13802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATGTTAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	44009422	44009247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44009200_44009400
ES.16532.1	chr18	-	158	1	Intergenic	novelGene_13803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAATAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	44446901	44446743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44446700_44446900
ES.16533.1	chr18	+	2077	5	NNC	ENSMUSG00000024472.10	novel	398	2	NA	NA	-14249	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.66077672302228	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCCCTTTTTGTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	44499319	44529151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44499514_44501242_44501420_44508874_44510172_44512590_44512788_44528939
ES.16533.10	chr18	+	8789	11	NNC	ENSMUSG00000024472.10	novel	8616	11	NA	NA	-12	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.1134900002256	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGGAGTTTTTTTT	NA	False	NA	NA	False	TATAAA	-12	NA	44513581	44558190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44513754_44528939_44529092_44532684_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548494_44550629
ES.16533.12	chr18	+	7237	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	30	1349	30	-1349	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTCTTTGGTTTGTA	NA	False	NA	4	True	AATAAA	-18	NA	44513623	44556687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.13	chr18	+	7807	5	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	25124	6	25124	-6	3prime_fragment	FALSE	canonical	2	46	junction_4	9.66953980290686	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAATTTTGTGGTTTTTT	NA	False	NA	9	True	AATAAA	-14	NA	44538717	44558030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.14	chr18	+	4004	1	Genic_Genomic	ENSMUSG00000024472.10	novel	NA	NA	NA	NA	41529	1090	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	44555122	44559126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_44555100_44559100
ES.16533.2	chr18	+	2067	3	Intergenic	novelGene_13805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAGTCAAGTACCA	NA	False	NA	NA	False	AATAAA	-9	NA	44499350	44510601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_44499514_44501242_44501420_44508874
ES.16533.3	chr18	+	565	3	Intergenic	novelGene_13804	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGTTCTAGGCTCCAT	NA	False	NA	NA	False	AATGAA	-29	NA	44499350	44509099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_44499514_44501242_44501420_44508874
ES.16533.4	chr18	+	2989	5	NNC	ENSMUSG00000024472.10	novel	398	2	NA	NA	-14214	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.2910528134766	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCCCTTTTTGTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	44499354	44529151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44499514_44501242_44501420_44508874_44510153_44512590_44513754_44528939
ES.16533.5	chr18	+	8656	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-40	0	-15	0	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTTTTTTTGTTCT	NA	False	NA	15	True	AATAAA	-20	NA	44513553	44558036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.6	chr18	+	8646	11	NNC	ENSMUSG00000024472.10	novel	8616	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.6892932665725	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTTTTTTTGTTCT	NA	False	NA	15	True	AATAAA	-20	NA	44513569	44558036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44513754_44528939_44529092_44532684_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.7	chr18	+	3020	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-23	5619	2	-5619	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTCCCAGCATTCCAG	NA	False	NA	NA	False	AATACA	-36	NA	44513570	44552417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.8	chr18	+	4389	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-23	4250	2	-4250	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTACCAGTCCTGTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	44513570	44553786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16533.9	chr18	+	1610	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-12	7018	-12	-7018	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGTTGCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	44513581	44551018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ES.16534.1	chr18	+	2277	1	Antisense	novelGene_ENSMUSG00000071856.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCAGGGGTGGGGATGG	3524	False	NA	NA	False	AAGAAA	-35	NA	44560328	44562605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_44560300_44562600
ES.16535.1	chr18	+	2944	1	Intergenic	novelGene_13809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCCCTGCTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	44771560	44774504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_44771600_44774500
ES.16536.1	chr18	-	229	1	Intergenic	novelGene_13806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	44511875	44511646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44511600_44511900
ES.16537.1	chr18	-	390	1	Intergenic	novelGene_13807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AAGAAA	-23	NA	44514816	44514426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44514400_44514800
ES.16538.1	chr18	-	1917	1	Antisense	novelGene_ENSMUSG00000024472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44533837	44531920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_44531900_44533800
ES.16539.1	chr18	-	6815	10	ISM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	187064	-4717	44314	497	3prime_fragment	FALSE	canonical	1	3	junction_7	2.19988776369148	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAATGCGAACAACTT	NA	False	NA	NA	False	AATAAA	-17	NA	44608269	44557629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200
ES.16539.10	chr18	-	4423	1	FSM	ENSMUSG00000071856.11	ENSMUST00000202090.2	2680	1	-3318	1575	-3318	-1575	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	6427	False	NA	NA	False	NA	NA	NA	44655901	44651478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_44651500_44655900
ES.16539.2	chr18	-	7878	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-52	-4220	-34	0	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTGGATTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	44795385	44558126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ES.16539.5	chr18	-	5187	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-18	-1563	0	1563	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTAATTTTCCTTTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	44795351	44560783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ES.16539.6	chr18	-	5094	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-83	-1405	-65	1405	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGCAATGTCCAGTTTT	NA	False	NA	NA	False	CATAAA	-22	NA	44795416	44560941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ES.16539.8	chr18	-	4259	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	-63	-590	-45	590	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCCAACTGCCCTGGTT	NA	False	NA	NA	False	AATACA	-19	NA	44795396	44561756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ES.16539.9	chr18	-	4264	1	Intergenic	novelGene_13808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGCCTTTAATGATCA	1604	False	NA	NA	False	NA	NA	NA	44573060	44568796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44568800_44573100
ES.1654.1	chr1	+	2040	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-103	-725	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTTTCTCCTCTTATA	NA	False	NA	16	True	AATAAA	-20	NA	155911368	155928550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155916820_155916881_155927039
ES.1654.10	chr1	+	5387	5	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	17.8465682975747	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911472	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.11	chr1	+	2700	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	1	-210	1	3	multi-exon	FALSE	canonical	3	72	junction_1	87	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	False	NA	13	True	AATAAA	-22	NA	155911472	155929485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155911667_155916820_155916881_155927039
ES.1654.12	chr1	+	5227	6	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	2	-48	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	21.6462467878383	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTTTTTACTAA	NA	False	NA	3	True	AATAAA	-15	NA	155911473	155944559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155916820_155916881_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.13	chr1	+	1697	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	2	-732	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTCTAATTTTCTCC	NA	False	NA	9	True	AATAAA	-13	NA	155911473	155928543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155927039
ES.1654.14	chr1	+	5403	6	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	2	-43	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	15.2446712001276	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTTTACTAAAATTT	NA	False	NA	8	True	AATAAA	-20	NA	155911473	155944564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155916820_155916881_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.15	chr1	+	5605	7	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	77.5637730444367	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911473	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.16	chr1	+	5165	5	NNC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.7527470868904	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911473	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155911667_155935156_155935334_155937383_155937916_155939338_155939441_155940446
ES.1654.18	chr1	+	2590	2	NIC	ENSMUSG00000050565.17	novel	452	2	NA	NA	16	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTTTTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-19	NA	155911487	155929279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155927039
ES.1654.2	chr1	+	2507	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	-15	-1	-15	1	multi-exon	FALSE	canonical	3	72	junction_1	87	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGGTTTTATTGTTT	NA	False	NA	4	True	AATAAA	-16	NA	155911456	155929276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155911667_155916820_155916881_155927039
ES.1654.20	chr1	+	5639	6	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-16	-49	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	16.5287628091155	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACTGATTTTTTACTA	NA	False	NA	2	True	AATAAA	-14	NA	155911501	155944558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.21	chr1	+	2400	2	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGCAGGTTTTATTGT	NA	False	NA	2	True	AATAAA	-14	NA	155911501	155929274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155927039
ES.1654.22	chr1	+	5012	6	NNC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-121	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	20.7132807637998	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGACTGATTTTTTAC	NA	False	NA	0	True	AATAAA	-12	NA	155911757	155944556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155911838_155935156_155935334_155937333_155937916_155939338_155939441_155940446_155941980_155942018
ES.1654.23	chr1	+	5285	5	NNC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-31	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1098796437864	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGACTGATTTTTTAC	NA	False	NA	0	True	AATAAA	-12	NA	155911847	155944556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155912162_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.24	chr1	+	2733	3	FSM	ENSMUSG00000050565.17	ENSMUST00000128941.8	2925	3	-17	209	-17	-2	multi-exon	FALSE	canonical	0	0	junction_1	123	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCAGCAGGTTTTATTG	NA	False	NA	1	True	AATAAA	-13	NA	155911861	155929273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155912301_155916820_155916881_155927039
ES.1654.25	chr1	+	5973	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	-3492	-1860	1265	0	multi-exon	FALSE	canonical	3	246	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155913143	155929275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916881_155927039
ES.1654.26	chr1	+	2411	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-89	207	-62	0	multi-exon	FALSE	canonical	3	145	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155916573	155929275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155927039
ES.1654.27	chr1	+	5187	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	-52	0	-52	0	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916583	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.28	chr1	+	1649	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-57	937	-30	-730	multi-exon	FALSE	canonical	3	145	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCTAATTTTCTCCTC	NA	False	NA	11	True	AATAAA	-15	NA	155916605	155928545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155927039
ES.1654.29	chr1	+	5561	8	NNC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	-30	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.7960261649536	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTTTTACTAAAATT	NA	False	NA	7	True	AATAAA	-19	NA	155916605	155944563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916749_155916820_155916881_155927039_155927370_155935156_155935334_155937383_155937916_155938289_155938390_155939338_155939441_155940446
ES.1654.3	chr1	+	1773	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	-14	732	-14	-732	multi-exon	FALSE	canonical	3	72	junction_1	87	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTCTAATTTTCTCC	NA	False	NA	9	True	AATAAA	-13	NA	155911457	155928543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155911667_155916820_155916881_155927039
ES.1654.30	chr1	+	5220	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	-29	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	53.9874059387928	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGGTGTGCGGTTGTT	NA	False	NA	47	True	AATAAA	-10	NA	155916606	155944603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155916749_155916820_155916881_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.31	chr1	+	2588	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	-56	-3	-29	3	multi-exon	FALSE	canonical	3	145	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	False	NA	13	True	AATAAA	-22	NA	155916606	155929485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155927039
ES.1654.32	chr1	+	2700	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	-13	-2066	-13	-1	multi-exon	FALSE	canonical	3	246	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGGCTTTTGTCTCT	NA	False	NA	9	True	AATAAA	-18	NA	155916622	155929481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916881_155927039
ES.1654.33	chr1	+	1688	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-36	937	-9	-730	multi-exon	FALSE	canonical	3	163	junction_1	41.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCTAATTTTCTCCTC	NA	False	NA	11	True	AATAAA	-15	NA	155916626	155928545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155916820_155916881_155927039
ES.1654.34	chr1	+	2421	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-36	204	-9	3	multi-exon	FALSE	canonical	3	163	junction_1	41.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGTTTTATTGTTTTT	NA	False	NA	6	True	AATAAA	-18	NA	155916626	155929278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155916820_155916881_155927039
ES.1654.35	chr1	+	1901	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	-8	3242	-8	777	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAACAATTGGCCTGA	NA	False	NA	NA	False	TTTAAA	-26	NA	155916627	155941365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.36	chr1	+	4946	6	NNC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	-8	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7132718603876	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACTGATTTTTTACTA	NA	False	NA	2	True	AATAAA	-14	NA	155916627	155944558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916753_155927039_155927370_155935156_155935334_155938289_155938390_155939338_155939441_155940446
ES.1654.37	chr1	+	2531	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	-8	1077	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	45.283992756823	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTAGCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	155916627	155941665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155916749_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.38	chr1	+	1697	3	NNC	ENSMUSG00000050565.17	novel	2589	3	NA	NA	-6	-733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTCTAATTTTCTC	NA	False	NA	8	True	AATAAA	-12	NA	155916629	155928542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916749_155916820_155916881_155927024
ES.1654.39	chr1	+	5007	6	NNC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	0	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.7467330487208	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACTGATTTTTTACTA	NA	False	NA	2	True	AATAAA	-14	NA	155916635	155944558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446_155942926_155943004
ES.1654.4	chr1	+	2673	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155911460	155929275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155916820_155916881_155927039
ES.1654.40	chr1	+	5465	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	45.283992756823	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916635	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155916749_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.41	chr1	+	5524	7	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	83.7834510310161	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916636	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155916749_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.42	chr1	+	5364	6	NNC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	1	-50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	50.4880183806019	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGACTGATTTTTTACT	NA	False	NA	1	True	AATAAA	-13	NA	155916636	155944557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916749_155927039_155927370_155935156_155935334_155937383_155937916_155939338_155939441_155940446
ES.1654.43	chr1	+	4119	2	NNC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916636	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155916672_155940523
ES.1654.44	chr1	+	2616	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	-24	-3	3	3	multi-exon	FALSE	canonical	3	163	junction_1	41.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	False	NA	13	True	AATAAA	-22	NA	155916638	155929485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155916820_155916881_155927039
ES.1654.45	chr1	+	1742	2	FSM	ENSMUSG00000050565.17	ENSMUST00000131359.2	621	2	6	-1127	6	-733	multi-exon	FALSE	canonical	3	246	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTCTAATTTTCTC	NA	False	NA	8	True	AATAAA	-12	NA	155916641	155928542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916881_155927039
ES.1654.46	chr1	+	3086	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	28	2021	1	1998	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTTGACCCACAAAAGG	NA	False	NA	NA	False	AGTAAA	-13	NA	155916663	155942586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.48	chr1	+	1980	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	4	605	4	-398	multi-exon	FALSE	canonical	3	163	junction_1	41.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTAGAGTGGTCTAGTG	NA	False	NA	NA	False	GATAAA	-15	NA	155916666	155928877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_155916749_155916820_155916881_155927039
ES.1654.49	chr1	+	8378	1	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	3503	-732	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTCTAATTTTCTCC	NA	False	NA	9	True	AATAAA	-13	NA	155920165	155928543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155920200_155928500
ES.1654.5	chr1	+	5557	6	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	12.9213002441705	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCGGTTGTTAGTGG	NA	False	NA	52	True	AATAAA	-15	NA	155911462	155944608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.50	chr1	+	3897	1	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	8716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155925378	155929275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155925400_155929300
ES.1654.51	chr1	+	5119	5	NNC	ENSMUSG00000050565.17	novel	624	2	NA	NA	-5935	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1098796437864	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGATTTTTTACTAAAAT	NA	False	NA	6	True	AATAAA	-18	NA	155933023	155944562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155933166_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.6	chr1	+	5227	5	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.6882315910308	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCGGTTGTTAGTGGT	NA	False	NA	53	True	AATAAA	-16	NA	155911463	155944609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911667_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.7	chr1	+	2880	3	NIC	ENSMUSG00000050565.17	novel	2491	3	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	105	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	False	NA	13	True	AATAAA	-22	NA	155911463	155929485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155916820_155916881_155927039
ES.1654.8	chr1	+	5739	7	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	-5	-44	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	79.0831138036995	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTTTTACTAAAATT	NA	False	NA	7	True	AATAAA	-19	NA	155911466	155944563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_155911838_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ES.1654.9	chr1	+	5679	8	NNC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	77.2985201959895	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911471	155944607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_155911838_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446_155941889_155941987
ES.16540.1	chr18	-	155	1	Intergenic	novelGene_13810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	44840268	44840113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_44840100_44840300
ES.16541.1	chr18	+	6502	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	711	2	711	-2	multi-exon	FALSE	canonical	3	27	junction_3	9.69634080312122	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGAAGTTATTCAGAT	NA	False	NA	28	True	AATAAA	-30	NA	44961523	45022782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.11	chr18	+	5933	28	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	761	-124	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.8447520147719	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTGTAATATCTAG	NA	False	NA	-94	True	AATAAA	-16	NA	44961573	45022660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.12	chr18	+	5952	29	NNC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	761	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	15.4534769220261	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAAATACTATGAAG	NA	False	NA	18	True	AATAAA	-36	NA	44961573	45022772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993534_44993626_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.13	chr18	+	6431	30	NNC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	761	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	13.149013336526	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATCAAATGAAATACTAT	NA	False	NA	14	True	AATAAA	-32	NA	44961573	45022768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973348_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.15	chr18	+	6012	28	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	778	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	15.2752523165195	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGAAGTTATTCAGAT	NA	False	NA	28	True	AATAAA	-30	NA	44961590	45022782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010710_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.16	chr18	+	11110	7	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	785	22	intron_retention	FALSE	canonical	1	1	junction_2	19.131126469709	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGCTTCTACTTACTAC	NA	False	NA	NA	False	NA	NA	NA	44961597	44988842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746
ES.16541.17	chr18	+	3154	5	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	464	22	intron_retention	FALSE	canonical	3	45	junction_4	6.29980158417708	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGCTTCTACTTACTAC	NA	False	NA	NA	False	NA	NA	NA	44981410	44988842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410
ES.16541.18	chr18	+	5853	8	NNC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	13235	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.3875798403787	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTATGAAGTTATTCA	NA	False	NA	25	True	AATAAA	-43	NA	45001536	45022779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_45002701_45002807_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.19	chr18	+	4827	4	ISM	ENSMUSG00000034653.12	ENSMUST00000201507.2	4290	17	27634	28	27444	-21	3prime_fragment	FALSE	canonical	3	57	junction_1	3.85861230093008	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACTTATCAAATGAAAT	NA	False	NA	9	True	AATAAA	-27	NA	45015745	45022763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.2	chr18	+	6367	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	724	124	724	-124	multi-exon	FALSE	canonical	3	27	junction_3	9.69634080312122	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTGTAATATCTAG	NA	False	NA	-94	True	AATAAA	-16	NA	44961536	45022660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.4	chr18	+	9096	28	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	736	-12	intron_retention	FALSE	canonical	3	27	junction_3	9.81194926721987	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAAATACTATGAAG	NA	False	NA	18	True	AATAAA	-36	NA	44961548	45022772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.5	chr18	+	6374	30	NNC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	736	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	12.9545992181806	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAAATACTATGAAG	NA	False	NA	18	True	AATAAA	-36	NA	44961548	45022772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018282_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.6	chr18	+	6058	28	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	737	-23	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.8447520147719	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATACTTATCAAATGAA	NA	False	NA	7	True	AATAAA	-25	NA	44961549	45022761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.7	chr18	+	6251	29	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	744	-23	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	12.4024252894837	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATACTTATCAAATGAA	NA	False	NA	7	True	AATAAA	-25	NA	44961556	45022761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16541.9	chr18	+	5973	27	NIC	ENSMUSG00000034653.12	novel	7215	30	NA	NA	744	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	15.9687194226713	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATCAAATGAAATACT	NA	False	NA	12	True	AATAAA	-30	NA	44961556	45022766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_44961986_44963218_44963310_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ES.16542.1	chr18	-	1858	1	Antisense	novelGene_ENSMUSG00000034653.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44962032	44960174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_44960200_44962000
ES.16542.2	chr18	-	1244	1	Antisense	novelGene_ENSMUSG00000034653.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAAGATTATGAGACT	NA	False	NA	NA	False	NA	NA	NA	44962034	44960790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_44960800_44962000
ES.16543.1	chr18	-	3561	1	Antisense	novelGene_ENSMUSG00000034653.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATATATCTTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	45019952	45016391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_45016400_45020000
ES.16544.1	chr18	+	160	1	Intergenic	novelGene_13811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	45262873	45263033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_45262900_45263000
ES.16545.1	chr18	+	136	1	Intergenic	novelGene_13812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45520898	45521034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_45520900_45521000
ES.16546.1	chr18	-	2181	1	Antisense	novelGene_ENSMUSG00000054477.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGTATGGTGACACATG	NA	False	NA	NA	False	NA	NA	NA	45692390	45690209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_45690200_45692400
ES.16546.2	chr18	-	1281	1	Antisense	novelGene_ENSMUSG00000054477.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTGTGTCCTTATTG	NA	False	NA	0	True	AATAAA	-27	NA	45692406	45691125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_45691100_45692400
ES.16546.3	chr18	-	419	2	Intergenic	novelGene_13813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTACCATGGTGTGTCC	NA	False	NA	-6	True	AATAAA	-21	NA	45692377	45691131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_45691359_45692185
ES.16547.1	chr18	+	2784	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-739	-320	-54	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTTGTTTGGTCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	45692481	45818949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
ES.16547.2	chr18	+	4876	7	ISM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-696	-321	-11	0	intron_retention	FALSE	canonical	2	15	junction_3	2.54405625374562	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTGTTTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	45692524	45818950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137
ES.16547.3	chr18	+	10864	6	ISM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-681	-318	4	-2	intron_retention	FALSE	canonical	2	15	junction_3	2.31516738055804	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACATTTGTTTGGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	45692539	45818947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003
ES.16547.4	chr18	+	3809	4	ISM	ENSMUSG00000054477.17	ENSMUST00000184101.8	2845	5	5	13909	5	-13909	5prime_fragment	FALSE	canonical	2	15	junction_3	2.16024689946929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGTTCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	45692540	45790407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264
ES.16547.5	chr18	+	2474	1	Intergenic	novelGene_13814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTACTATACATGTGCA	NA	False	NA	NA	False	AAGAAA	-44	NA	45811284	45813758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_45811300_45813800
ES.16548.1	chr18	-	4452	10	FSM	ENSMUSG00000033949.13	ENSMUST00000167364.9	2553	10	-41	-1858	-41	-134	multi-exon	FALSE	canonical	0	0	junction_3	0.737027731190089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGTGTAGTTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	46331926	46298500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46300835_46302211_46302510_46305444_46305736_46308614_46308740_46308937_46309192_46311467_46311564_46319188_46319336_46321457_46321784_46329140_46329376_46331580
ES.16548.2	chr18	-	4233	10	FSM	ENSMUSG00000033949.13	ENSMUST00000167364.9	2553	10	0	-1680	0	-312	multi-exon	FALSE	canonical	0	0	junction_3	0.737027731190089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGTGTGGGTTAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	46331885	46298678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46300835_46302211_46302510_46305444_46305736_46308614_46308740_46308937_46309192_46311467_46311564_46319188_46319336_46321457_46321784_46329140_46329376_46331580
ES.16548.3	chr18	-	3998	10	FSM	ENSMUSG00000033949.13	ENSMUST00000167364.9	2553	10	1	-1446	1	-546	multi-exon	FALSE	canonical	0	0	junction_3	0.737027731190089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCTCTATTTGATTA	NA	False	NA	NA	False	NA	NA	NA	46331884	46298912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46300835_46302211_46302510_46305444_46305736_46308614_46308740_46308937_46309192_46311467_46311564_46319188_46319336_46321457_46321784_46329140_46329376_46331580
ES.16549.1	chr18	+	158	1	Intergenic	novelGene_13815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAAAAAGGA	NA	False	NA	2	True	NA	NA	NA	46390235	46390393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46390200_46390400
ES.1655.1	chr1	-	3899	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	365	-30	-12	15	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGGTTTTTTGTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	155911808	155880329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.2	chr1	-	3923	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	450	-1650	20	15	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGGTTTTTTGTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	155911776	155880329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.3	chr1	-	3793	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	364	77	-13	-77	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTAGCAGTTAATGTG	NA	False	NA	NA	False	AATAAA	-26	NA	155911809	155880436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.4	chr1	-	3745	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	521	-1543	91	-77	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTAGCAGTTAATGTG	NA	False	NA	NA	False	AATAAA	-26	NA	155911705	155880436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.5	chr1	-	1791	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	283	2160	3	7	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCTGTGATTTGAGAG	NA	False	NA	NA	False	AGTAAA	-43	NA	155911890	155882519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.6	chr1	-	1757	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	419	547	-11	0	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911807	155882526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ES.1655.7	chr1	-	1979	11	NNC	ENSMUSG00000026466.17	novel	2723	11	NA	NA	408	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	35.4103092333292	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCCTAATTATCTGTG	NA	False	NA	NA	False	AGTAAA	-34	NA	155911388	155882528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155910860
ES.1655.8	chr1	-	1738	10	NNC	ENSMUSG00000026466.17	novel	3716	10	NA	NA	-363	-25	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	35.253928946613	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTGGAATAACTAAATC	NA	False	NA	NA	False	AGTAAA	-11	NA	155910989	155882551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155910623
ES.1655.9	chr1	-	179	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	155897435	155897256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155897300_155897400
ES.16550.1	chr18	-	4038	1	Genic_Genomic	ENSMUSG00000024477.5	novel	NA	NA	NA	NA	12153	2636	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46369819	46365781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_46365800_46369800
ES.16550.10	chr18	-	5615	8	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	0	-1511	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	47.2392952996567	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGATTGTGTGAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	46413894	46369928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.11	chr18	-	5748	8	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	-1511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.2491036868471	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGATTGTGTGAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	46413893	46369928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382123_46391156_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.12	chr18	-	5682	9	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	114	-1511	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.5308524460071	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGATTGTGTGAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	46413772	46369928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407652_46407776_46413746
ES.16550.13	chr18	-	5390	10	NNC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	-19	-2057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.3594315963113	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGACAGTAACGTGGAG	NA	False	NA	NA	False	NA	NA	NA	46413916	46370474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46401622_46401733_46407652_46407776_46413746
ES.16550.14	chr18	-	5229	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	144	2104	-19	-2104	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	46413916	46370521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.15	chr18	-	5283	9	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	0	-2109	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	43.7362478386064	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	46413894	46370526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382204_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.18	chr18	-	5257	10	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	-2163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.3594315963113	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413893	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46401622_46401733_46407656_46407776_46413746
ES.16550.19	chr18	-	5080	8	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	0	-2163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	48.5382239443665	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413894	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46407656_46407776_46413746
ES.16550.2	chr18	-	8376	9	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	-3	837	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	44.1474801092882	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGAGGTGTAGGGGTGGAA	NA	False	NA	NA	False	AATATA	-24	NA	46413900	46367580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413524
ES.16550.20	chr18	-	5112	8	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	-12	-2163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.2491036868471	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413909	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382123_46391156_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.21	chr18	-	8698	1	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	2694	-2163	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46379278	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46370600_46379300
ES.16550.22	chr18	-	5258	9	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	-2163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.5337085619012	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413893	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46378818_46378917_46379628_46379738_46381937_46382204_46387345_46387392_46391151_46391285_46392670_46392823_46407656_46407776_46413746
ES.16550.23	chr18	-	5200	10	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	1	-2163	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	54.3997549014086	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413893	46370580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378266_46378320_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.27	chr18	-	5213	10	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	0	-2196	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	55.4071350755835	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46413894	46370613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378818_46378917_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.28	chr18	-	1820	4	NNC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	-99	1757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.8791845139511	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAATGTTTTCTAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	46382071	46371914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46372272_46373548_46374769_46379628_46379738_46381937
ES.16550.29	chr18	-	3119	10	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	0	1009	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	54.3997549014086	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTAGTGCTGGGAGTC	NA	False	NA	NA	False	ATTAAA	-34	NA	46413894	46372662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378266_46378320_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.3	chr18	-	4164	1	Genic_Genomic	ENSMUSG00000024477.5	novel	NA	NA	NA	NA	9946	555	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAGAGAGAACTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	46372026	46367862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_46367900_46372000
ES.16550.30	chr18	-	3053	9	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	1	993	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.5308524460071	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCTTAGACTTGAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	46413893	46372678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407652_46407776_46413746
ES.16550.32	chr18	-	6184	8	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	1	990	intron_retention	FALSE	canonical	3	16	junction_6	43.176429699926	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGGCTTAGACTTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	46413893	46372681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46396025_46407652_46407776_46413746
ES.16550.33	chr18	-	2639	8	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	4	771	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	47.2392952996567	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGAAGGAAATTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	46413890	46372900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46379628_46379738_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.34	chr18	-	2827	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	167	4483	1	771	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGAAGGAAATTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	46413893	46372900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.35	chr18	-	2793	9	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	656	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	43.7362478386064	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTGTCGTCTTGTTTT	NA	False	NA	NA	False	GATAAA	-15	NA	46413893	46373015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382204_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.36	chr18	-	2768	9	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.3231453012696	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTGTCGTCTTGTTTT	NA	False	NA	NA	False	GATAAA	-15	NA	46413893	46373015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374825_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.38	chr18	-	2763	10	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	1	654	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	54.3997549014086	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCGTTGTCGTCTTGTT	NA	False	NA	NA	False	GATAAA	-13	NA	46413893	46373017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378266_46378320_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.39	chr18	-	2710	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	155	4612	-8	642	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTTTACTTACTCGT	NA	False	NA	NA	False	GATAAA	-1	NA	46413905	46373029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.4	chr18	-	7304	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	181	-8	7	8	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAAAATCCAGTTTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	46413879	46368409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.40	chr18	-	2510	10	NNC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	1	569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.179499022134	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTCATTTATATTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	46413893	46373102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374305_46374419_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.41	chr18	-	2290	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	166	5021	0	233	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTATCTGAAATGCTCC	NA	False	NA	NA	False	NA	NA	NA	46413894	46373438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.42	chr18	-	1982	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	164	5331	1	-77	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGAGTTCTTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	46413896	46373748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.43	chr18	-	1203	7	ISM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	167	13167	1	-6998	5prime_fragment	FALSE	canonical	3	127	junction_4	8.37489635093407	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTGTATGTAATGTCT	NA	False	NA	NA	False	AATATA	-14	NA	46413893	46381584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.44	chr18	-	1837	7	NNC	ENSMUSG00000024477.5	novel	1845	3	NA	NA	0	8088	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	51.1482051384884	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTGTGCTTAGTT	NA	False	NA	NA	False	AGTAAA	-18	NA	46413894	46382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46383940_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.45	chr18	-	653	3	NNC	ENSMUSG00000024477.5	novel	1039	2	NA	NA	-18	5190	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTTAAAAAAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	46413915	46401367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46401733_46407656_46407776_46413746
ES.16550.5	chr18	-	7191	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	160	126	-3	-126	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATCTACCTACATTC	NA	False	NA	-1	True	NA	NA	NA	46413900	46368543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.6	chr18	-	7288	10	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	-3	-127	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	55.4071350755835	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTATCTACCTACATT	NA	False	NA	-2	True	NA	NA	NA	46413900	46368544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378818_46378917_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.7	chr18	-	7229	10	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	2	-133	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	54.3997549014086	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTATCTATCTACC	NA	False	NA	-8	True	NA	NA	NA	46413892	46368550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378266_46378320_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16550.8	chr18	-	7239	9	NNC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	0	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	57.5298835389052	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATTATCTATCTAC	NA	False	NA	-9	True	NA	NA	NA	46413894	46368551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46374769_46379628_46379738_46381937_46382204_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407675_46407776_46413746
ES.16550.9	chr18	-	5866	10	NIC	ENSMUSG00000024477.5	novel	7477	9	NA	NA	24	-1511	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	55.4071350755835	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGATTGTGTGAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	46413862	46369928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46374769_46378818_46378917_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ES.16551.1	chr18	+	181	1	Intergenic	novelGene_13817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTGTTAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	46443467	46443648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46443500_46443600
ES.16552.1	chr18	-	3577	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	37	-813	0	813	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACTTTGTTTAGGGCC	2750	False	NA	NA	False	AATAAA	-17	NA	46444958	46414404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.10	chr18	-	818	5	ISM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	36	9164	-1	-451	5prime_fragment	FALSE	canonical	3	52	junction_1	11.008519428152	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGATCGAGGAAACAAA	2749	False	NA	NA	False	AATAAA	-15	NA	46444959	46424381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.11	chr18	-	3139	1	Intergenic	novelGene_13816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9301	False	NA	NA	False	NA	NA	NA	46438407	46435268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46435300_46438400
ES.16552.12	chr18	-	3283	1	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	-9	328	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCAGTTGTCCTTTGT	2741	False	NA	NA	False	NA	NA	NA	46444967	46441684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46441700_46445000
ES.16552.2	chr18	-	2338	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	0	463	0	-463	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCACCATTTTCT	2713	False	NA	-1	True	TATAAA	-22	NA	46444995	46415680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.3	chr18	-	2216	9	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	-11	-463	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	22.4468121344658	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCACCATTTTCT	2739	False	NA	-1	True	TATAAA	-22	NA	46444969	46415680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46416354_46416743_46416863_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.4	chr18	-	2654	9	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	27	-464	intron_retention	FALSE	canonical	3	48	junction_3	12.7549010188241	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCTGGCACCATTTTC	2777	False	NA	-2	True	TATAAA	-21	NA	46444931	46415681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.5	chr18	-	4192	8	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	-11	393	intron_retention	FALSE	canonical	3	52	junction_4	10.8289106618556	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACTATTTTAAATA	2739	False	NA	-4	True	ATTAAA	-16	NA	46444969	46415831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46416863_46418679_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.6	chr18	-	2151	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	35	615	-2	392	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACTATTTTAAAT	2748	False	NA	-5	True	ATTAAA	-15	NA	46444960	46415832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.7	chr18	-	2078	9	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	12	392	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	22.4468121344658	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACTATTTTAAAT	2725	False	NA	-5	True	ATTAAA	-15	NA	46444983	46415832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46416354_46416743_46416863_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16552.8	chr18	-	2223	11	NNC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	3	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.3639234435727	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACTATTTTAAAT	2753	False	NA	-5	True	ATTAAA	-15	NA	46444955	46415832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46424966_46425044_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ES.16553.1	chr18	+	4530	2	Intergenic	novelGene_13818	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACCCTAGATTTCTTA	121	False	NA	NA	False	NA	NA	NA	46609401	46614099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46613124_46613291
ES.16554.1	chr18	+	131	1	Intergenic	novelGene_13819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	8933	False	NA	NA	False	NA	NA	NA	46639844	46639975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46639800_46640000
ES.16555.1	chr18	+	170	1	Intergenic	novelGene_13820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGGCCAAAGCTGCATT	NA	False	NA	NA	False	NA	NA	NA	46644704	46644874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46644700_46644900
ES.16556.1	chr18	+	2515	2	Antisense	novelGene_ENSMUSG00000033319.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCACACACATCCTCACA	NA	False	NA	NA	False	AATATA	-33	NA	46648852	46651576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_46650566_46650774
ES.16556.2	chr18	+	265	1	Intergenic	novelGene_13821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCCAACAGCCTGT	NA	False	NA	NA	False	AATGAA	-26	NA	46650573	46650838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46650600_46650800
ES.16557.1	chr18	+	2434	1	Intergenic	novelGene_13822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAATGGTCTTATATCAT	NA	False	NA	NA	False	NA	NA	NA	46652795	46655229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46652800_46655200
ES.16558.1	chr18	-	5854	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	229	-357	229	357	multi-exon	FALSE	canonical	3	135	junction_1	21.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGTGTCTTAAGTTAT	NA	False	NA	NA	False	AATATA	-13	NA	46658809	46634455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.10	chr18	-	3664	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	-14	2076	-14	-2076	multi-exon	FALSE	canonical	3	135	junction_1	21.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTCCCCTTAATGAA	NA	False	NA	0	True	ATTAAA	-20	NA	46659052	46636888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.11	chr18	-	2973	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	218	2535	218	-2535	multi-exon	FALSE	canonical	3	135	junction_1	21.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTTGAAATTTAGGT	NA	False	NA	NA	False	NA	NA	NA	46658820	46637347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.12	chr18	-	2826	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	43	2857	43	-2857	multi-exon	FALSE	canonical	3	135	junction_1	21.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCAGTTACCATAAGTG	NA	False	NA	NA	False	CATAAA	-20	NA	46658995	46637669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.13	chr18	-	2627	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	9	3090	9	-3090	multi-exon	FALSE	canonical	3	135	junction_1	21.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGATTTTGTTTGCTG	NA	False	NA	45	True	NA	NA	NA	46659029	46637902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.15	chr18	-	4446	1	NIC	ENSMUSG00000033319.6	novel	5726	3	NA	NA	21	-19759	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAATAGGCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	46659017	46654571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46654600_46659000
ES.16558.16	chr18	-	3623	2	ISM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	18	19797	18	-19797	5prime_fragment	FALSE	canonical	3	178	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46659020	46654609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46657897_46658684
ES.16558.2	chr18	-	3436	1	Genic_Genomic	ENSMUSG00000033319.6	novel	NA	NA	NA	NA	21035	245	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTCTTGTCCTTAAT	NA	False	NA	NA	False	ACTAAA	-41	NA	46638003	46634567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_46634600_46638000
ES.16558.3	chr18	-	5746	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	-15	-5	-15	5	multi-exon	FALSE	canonical	3	135	junction_1	21.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTCTCATTAACTCTT	NA	False	NA	2	True	AATAAA	-23	NA	46659053	46634807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.5	chr18	-	4906	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	-10	830	-10	-830	multi-exon	FALSE	canonical	3	135	junction_1	21.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTTTTTGTCCA	NA	False	NA	-17	True	AATAAA	-19	NA	46659048	46635642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.6	chr18	-	4414	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	19	1293	19	-1293	multi-exon	FALSE	canonical	3	135	junction_1	21.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCATTGGTTGATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	46659019	46636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.7	chr18	-	4215	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	9	1502	9	-1502	multi-exon	FALSE	canonical	3	135	junction_1	21.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGTTTTACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	46659029	46636314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.8	chr18	-	4103	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	9	1614	9	-1614	multi-exon	FALSE	canonical	3	135	junction_1	21.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGAGGTTTAATTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	46659029	46636426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46639457_46657168_46657897_46658684
ES.16558.9	chr18	-	3866	3	NNC	ENSMUSG00000033319.6	novel	5726	3	NA	NA	221	-1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTGAGGTTTAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	46658817	46636429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46639457_46657168_46657875_46658684
ES.16559.1	chr18	-	159	1	Intergenic	novelGene_13823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6163	False	NA	NA	False	NA	NA	NA	46667307	46667148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46667100_46667300
ES.1656.1	chr1	-	167	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCGAGTCAGGGA	NA	False	NA	NA	False	NA	NA	NA	155916072	155915905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155915900_155916100
ES.16560.1	chr18	+	174	1	Intergenic	novelGene_13824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTGCC	NA	False	NA	NA	False	NA	NA	NA	46667429	46667603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46667400_46667600
ES.16561.1	chr18	+	159	1	Intergenic	novelGene_13825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46680412	46680571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46680400_46680600
ES.16562.1	chr18	+	169	1	Intergenic	novelGene_13826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	46696404	46696573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46696400_46696600
ES.16562.2	chr18	+	458	1	Intergenic	novelGene_13827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	46696405	46696863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46696400_46696900
ES.16563.1	chr18	-	4805	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	-87	-514	-87	514	multi-exon	FALSE	canonical	3	7	junction_1	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCCTTTGTTATTTCT	9418	False	NA	NA	False	AATAAA	-22	NA	46707687	46689843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46694140_46705867_46705971_46707281
ES.16563.2	chr18	-	3029	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	78	1097	78	-1097	multi-exon	FALSE	canonical	3	7	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGACTATTGGTCTCA	9583	False	NA	NA	False	AATAAA	-15	NA	46707522	46691454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46694140_46705867_46705971_46707281
ES.16564.1	chr18	-	345	1	Intergenic	novelGene_13828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAATGTTCATGGA	9651	False	NA	NA	False	CATAAA	-11	NA	46718704	46718359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46718400_46718700
ES.16565.1	chr18	+	2024	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	-117	958	-114	4	multi-exon	FALSE	canonical	3	1498	junction_1	106	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGAGGCTTTTTTTTTTT	NA	False	NA	31	True	AATAAA	-25	NA	46730653	46742320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570
ES.16565.10	chr18	+	2217	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	27	-1518	12	1518	multi-exon	FALSE	canonical	0	0	junction_4	803.50855627056	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTGCGTGTATGCCTG	NA	False	NA	NA	False	TTTAAA	-26	NA	46730803	46751041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ES.16565.11	chr18	+	1155	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	33	-462	-12	462	multi-exon	FALSE	canonical	0	0	junction_4	803.50855627056	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATAATAACATAAGTC	NA	False	NA	NA	False	AGTAAA	-21	NA	46730809	46749985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ES.16565.12	chr18	+	4061	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	47	-1243	-4	1243	multi-exon	FALSE	canonical	3	1498	junction_1	106	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGGCCTCCAACCACA	NA	False	NA	NA	False	NA	NA	NA	46730817	46744521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570
ES.16565.13	chr18	+	2912	4	FSM	ENSMUSG00000057561.11	ENSMUST00000238168.2	2012	4	57	-957	3	-5	multi-exon	FALSE	canonical	3	13	junction_1	796.694141785639	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAAATGTTTTTTT	NA	False	NA	15	True	ATTAAA	-12	NA	46730824	46743273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731117_46731224_46731707_46731768_46740570
ES.16565.14	chr18	+	2129	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	-40	76	3	2	multi-exon	FALSE	canonical	3	27	junction_1	841.5	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTTTCTTTTTAAT	NA	False	NA	12	True	AATAAA	-13	NA	46730824	46742240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46731224_46731707_46731768_46740570
ES.16565.15	chr18	+	2793	3	NNC	ENSMUSG00000057561.11	novel	2865	3	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	855	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATCTAAATGTTTTTT	NA	False	NA	14	True	ATTAAA	-11	NA	46730824	46743272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731719_46731768_46740570
ES.16565.16	chr18	+	2712	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	761.070007000378	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAAATGTTTTTTT	NA	False	NA	15	True	ATTAAA	-12	NA	46730824	46743273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46740570_46742003_46742096
ES.16565.17	chr18	+	2835	4	NNC	ENSMUSG00000057561.11	novel	726	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	761.070007000378	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAATCTCTCCAGAAC	NA	False	NA	NA	False	AAAAAG	-10	NA	46730824	46749523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46740570_46743278_46749498
ES.16565.18	chr18	+	4783	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	58	-1976	7	1976	multi-exon	FALSE	canonical	3	1498	junction_1	106	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGCAGCGAGATGGATG	NA	False	NA	NA	False	AATAAA	-11	NA	46730828	46745254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570
ES.16565.19	chr18	+	3155	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	-30	-960	13	-2	multi-exon	FALSE	canonical	3	27	junction_1	841.5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAAATGTTTTTTTTTT	NA	False	NA	18	True	ATTAAA	-15	NA	46730834	46743276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46731224_46731707_46731768_46740570
ES.16565.2	chr18	+	2983	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	-112	-6	-109	6	multi-exon	FALSE	canonical	3	1498	junction_1	106	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTTTTTCTTTCCCA	NA	False	NA	26	True	ATTAAA	-23	NA	46730658	46743284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570
ES.16565.20	chr18	+	3139	3	NNC	ENSMUSG00000057561.11	novel	2865	3	NA	NA	15	-5	intron_retention	FALSE	canonical	0	0	junction_1	855	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAAATGTTTTTTT	NA	False	NA	15	True	ATTAAA	-12	NA	46730836	46743273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46731213_46731707_46731768_46740570
ES.16565.21	chr18	+	1934	4	FSM	ENSMUSG00000057561.11	ENSMUST00000238168.2	2012	4	77	1	-20	-1	multi-exon	FALSE	canonical	3	13	junction_1	796.694141785639	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGAGAGGCTTTTTT	NA	False	NA	26	True	AATAAA	-20	NA	46730844	46742315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731117_46731224_46731707_46731768_46740570
ES.16565.22	chr18	+	2172	2	FSM	ENSMUSG00000057561.11	ENSMUST00000235973.2	2651	2	554	-75	265	4	multi-exon	FALSE	canonical	3	1710	junction_1	0	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGAGGCTTTTTTTTTTT	NA	False	NA	31	True	AATAAA	-25	NA	46731345	46742320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46731768_46740570
ES.16565.23	chr18	+	2804	2	FSM	ENSMUSG00000057561.11	ENSMUST00000235973.2	2651	2	878	-1031	589	-2	multi-exon	FALSE	canonical	3	1710	junction_1	0	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAAATGTTTTTTTTTT	NA	False	NA	18	True	ATTAAA	-15	NA	46731669	46743276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46731768_46740570
ES.16565.24	chr18	+	2914	3	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	615	-6	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	3.5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATCTAAATGTTTTTT	NA	False	NA	14	True	ATTAAA	-11	NA	46731695	46743272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46731768_46732327_46732468_46740570
ES.16565.25	chr18	+	6123	2	NNC	ENSMUSG00000057561.11	novel	2651	2	NA	NA	2631	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46733711	46742245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46735922_46738332
ES.16565.26	chr18	+	9417	1	NIC	ENSMUSG00000057561.11	novel	2865	3	NA	NA	2779	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	936	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAAATGTTTTTTTTTT	NA	False	NA	18	True	ATTAAA	-15	NA	46733859	46743276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46733900_46743300
ES.16565.27	chr18	+	4315	1	NIC	ENSMUSG00000057561.11	novel	2012	4	NA	NA	6850	0	mono-exon	FALSE	NA	NA	NA	NA	NA	923	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46737930	46742245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46737900_46742200
ES.16565.3	chr18	+	3202	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	-101	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	706.163972144965	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATCTAAATGTTTTT	NA	False	NA	13	True	ATTAAA	-10	NA	46730666	46743271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46734111_46734352_46740570
ES.16565.4	chr18	+	3007	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	692.734837838805	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTTTTTTTCTTTC	NA	False	NA	23	True	ATTAAA	-20	NA	46730771	46743281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46732327_46732468_46740570
ES.16565.5	chr18	+	1963	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	692.734837838805	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACTTTTTCTTTTTA	NA	False	NA	10	True	AATAAA	-11	NA	46730772	46742238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46732327_46732468_46740570
ES.16565.6	chr18	+	1816	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	8	-120	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	692.734837838805	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGCTAAGTTTTCCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	46730799	46742118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46732327_46732468_46740570
ES.16565.7	chr18	+	2581	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	24	-1879	9	1879	multi-exon	FALSE	canonical	0	0	junction_4	803.50855627056	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAATGCAGAGTGGT	NA	False	NA	NA	False	AATAAA	-5	NA	46730800	46751402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ES.16565.8	chr18	+	3023	5	NNC	ENSMUSG00000057561.11	novel	2012	4	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	736.704486208683	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAAATGTTTTTTT	NA	False	NA	15	True	ATTAAA	-12	NA	46730802	46743273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731117_46731224_46731326_46731416_46731707_46731768_46740570
ES.16565.9	chr18	+	2820	3	NNC	ENSMUSG00000057561.11	novel	2865	3	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	749	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAAATGTTTTTTT	NA	False	NA	15	True	ATTAAA	-12	NA	46730803	46743273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46730868_46731707_46731768_46740577
ES.16566.1	chr18	-	3609	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-156	-2105	-156	12	multi-exon	FALSE	canonical	3	571	junction_1	23	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTCTCAGGATTTA	NA	False	NA	0	True	AATAAA	-29	NA	46730758	46718993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46721756_46726315_46726562_46730157
ES.16566.10	chr18	-	2817	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	82	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730299	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46719630_46719926_46721756_46726315_46726562_46730157
ES.16566.11	chr18	-	3321	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	2	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730581	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46721152_46721226_46721756_46726315_46726562_46730157
ES.16566.12	chr18	-	3366	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	-9	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730592	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46720011_46720051_46721756_46726315_46726562_46730157
ES.16566.13	chr18	-	5593	2	NNC	ENSMUSG00000033184.15	novel	7982	2	NA	NA	5354	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	3328	False	NA	-36	True	ATTAAA	-37	NA	46725027	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46723103_46723507
ES.16566.15	chr18	-	3345	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-3	-1994	-3	-99	multi-exon	FALSE	canonical	3	571	junction_1	23	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTTACTTTGAAAAA	NA	False	NA	-111	True	TATAAA	-13	NA	46730605	46719104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46721756_46726315_46726562_46730157
ES.16566.16	chr18	-	3019	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	7	-1678	7	-415	multi-exon	FALSE	canonical	3	571	junction_1	23	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGAGTTTATACTGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	46730595	46719420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46721756_46726315_46726562_46730157
ES.16566.17	chr18	-	1921	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-15	-558	-15	558	multi-exon	FALSE	canonical	3	571	junction_1	23	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTTTAGAATTGGTT	NA	False	NA	NA	False	ATTAAA	-31	NA	46730617	46720540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46721756_46726315_46726562_46730157
ES.16566.18	chr18	-	1472	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	-99	-25	-99	25	multi-exon	FALSE	canonical	3	571	junction_1	23	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCTGCACTGCTTAATT	NA	False	NA	NA	False	AAGAAA	-29	NA	46730701	46721073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46721756_46726315_46726562_46730157
ES.16566.2	chr18	-	7058	1	NIC	ENSMUSG00000033184.15	novel	1436	4	NA	NA	4321	3	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTCACTTGTTTCTCT	2295	False	NA	-9	True	AATAAA	-20	NA	46726060	46719002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_46719000_46726100
ES.16566.3	chr18	-	3370	3	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	285.5	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTGCCTTCACTTGTT	NA	False	NA	-14	True	AATAAA	-15	NA	46730585	46719007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46721756_46726315_46726562_46730209
ES.16566.5	chr18	-	3379	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAAATTGCCTTCACTT	NA	False	NA	-17	True	AATAAA	-12	NA	46730595	46719010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46719414_46719463_46721756_46726315_46726562_46730157
ES.16566.6	chr18	-	3298	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAAATTGCCTTCACTT	NA	False	NA	-17	True	AATAAA	-12	NA	46730563	46719010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46720040_46720138_46721756_46726315_46726562_46730157
ES.16566.7	chr18	-	3129	5	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	52	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.444952890447	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730531	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46719917_46720024_46721118_46721226_46721756_46726315_46726562_46730157
ES.16566.8	chr18	-	3259	5	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	1	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.444952890447	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730582	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46719407_46719485_46720217_46720275_46721756_46726315_46726562_46730157
ES.16566.9	chr18	-	3335	4	NNC	ENSMUSG00000033184.15	novel	1348	3	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	280.643308608395	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAAAAAATT	NA	False	NA	-36	True	ATTAAA	-37	NA	46730583	46719029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46719949_46720011_46721756_46726315_46726562_46730157
ES.16567.1	chr18	-	179	1	Intergenic	novelGene_13829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7853	False	NA	NA	False	NA	NA	NA	46733711	46733532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46733500_46733700
ES.16568.1	chr18	-	143	1	Intergenic	novelGene_13830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGATTTCATATT	NA	False	NA	NA	False	NA	NA	NA	46813234	46813091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46813100_46813200
ES.16569.1	chr18	-	3496	1	Intergenic	novelGene_13831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGACCATTCTTTTG	NA	False	NA	NA	False	ATTAAA	-32	NA	46846137	46842641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46842600_46846100
ES.1657.1	chr1	-	3776	4	NNC	ENSMUSG00000015484.4	novel	3882	5	NA	NA	54874	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.4142135623731	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGGGTCTTCCTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	155977722	155951706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_155955057_155955697_155955935_155963530_155963630_155977632
ES.16570.1	chr18	+	130	1	Intergenic	novelGene_13832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9815	False	NA	NA	False	NA	NA	NA	46859861	46859991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46859900_46860000
ES.16571.1	chr18	-	1706	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	-119	8	-119	3	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTTTTGATGCAC	2458	False	NA	0	True	AATAAA	-22	NA	46861581	46846267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ES.16571.2	chr18	-	1105	3	NNC	ENSMUSG00000033022.9	novel	1466	4	NA	NA	11406	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.5	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGCCTTTTTGATGC	NA	False	NA	-2	True	AATAAA	-20	NA	46849690	46846269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_46847029_46848663_46848834_46849514
ES.16571.4	chr18	-	3753	2	ISM	ENSMUSG00000033022.9	ENSMUST00000234819.2	1466	4	9754	10	9428	-10	3prime_fragment	FALSE	canonical	3	151	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGAACTACACATTGC	NA	False	NA	-13	True	AATAAA	-9	NA	46851668	46846280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46847029_46848663
ES.16571.5	chr18	-	1403	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	-120	312	-120	-301	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGTGTCTGTTTTCATA	2457	False	NA	-1	True	AGTAAA	-19	NA	46861582	46846571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ES.16572.1	chr18	+	192	1	Intergenic	novelGene_13833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATATTTTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	46872611	46872803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_46872600_46872800
ES.16573.1	chr18	+	1642	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	-277	-6	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTGTCAGTGTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	46874665	46923684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ES.16573.2	chr18	+	1584	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	-273	209	-273	-6	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTGTCAGTGTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	46874669	46923684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ES.16573.3	chr18	+	1475	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	-270	315	-270	-112	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAAAGTACCTTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	46874672	46923578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ES.16573.4	chr18	+	1140	7	NNC	ENSMUSG00000024480.10	novel	978	7	NA	NA	5	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	223.891900999865	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAAAGTACCTTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	46874947	46923578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46874972_46875031_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ES.16573.5	chr18	+	998	4	NIC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	-9	-102	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	258.329247279513	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTGTTTTGCTTGG	NA	False	NA	NA	False	AATAAA	-26	NA	46874955	46923588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46875149_46912254_46912327_46913727_46913836_46922963
ES.16573.6	chr18	+	865	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	56	599	-4	-76	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTGATTTTGTTTTG	NA	False	NA	NA	False	AAGAAA	-10	NA	46874998	46923294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ES.16573.7	chr18	+	5204	1	NIC	ENSMUSG00000024480.10	novel	743	8	NA	NA	26548	-631	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGGAAGAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	46917229	46922433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46917200_46922400
ES.16573.8	chr18	+	1758	1	NIC	ENSMUSG00000024480.10	novel	1520	6	NA	NA	31245	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAACTGTCAGTGTTGAC	79	False	NA	NA	False	AATAAA	-20	NA	46921926	46923684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46921900_46923700
ES.16574.1	chr18	-	2789	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	-264	2240	-263	-2240	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATGTATACCACATTT	NA	False	NA	31	True	CATAAA	-14	NA	46874910	46865450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ES.16574.2	chr18	-	8393	2	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	14	2284	-8	-2284	intron_retention	FALSE	canonical	3	312	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACCAGAATAACTTAT	NA	False	NA	-13	True	AATAAA	-16	NA	46874632	46865494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46867577_46868321
ES.16574.3	chr18	-	3745	3	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	2583	2286	2561	-2286	3prime_fragment	FALSE	canonical	3	312	junction_1	11.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTACCAGAATAACTT	NA	False	NA	-15	True	AATAAA	-14	NA	46872063	46865496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46867577_46868321_46868385_46870461
ES.16574.4	chr18	-	639	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	13	4113	-9	1290	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTAGAGTGTGCCATTAC	NA	False	NA	NA	False	CATAAA	-18	NA	46874633	46867323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ES.16574.5	chr18	-	3640	2	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	2932	4119	2910	1284	intron_retention	FALSE	canonical	3	312	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGACGTTAGAGTGTGC	NA	False	NA	NA	False	CATAAA	-12	NA	46871714	46867329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_46867577_46868321
ES.16575.1	chr18	-	367	1	Intergenic	novelGene_13834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46878346	46877979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_46878000_46878300
ES.16576.1	chr18	+	4650	20	FSM	ENSMUSG00000024481.6	ENSMUST00000025358.4	5016	20	-2	368	-2	-368	multi-exon	FALSE	canonical	0	0	junction_2	1.09392682583298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATGTCGATTTGGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	46983102	47039941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981_47028120_47033549_47033626_47038282
ES.16576.2	chr18	+	8258	1	NIC	ENSMUSG00000024481.6	novel	5016	20	NA	NA	31	-23409	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATTTTTGGGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	46983136	46991394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46983100_46991400
ES.16576.3	chr18	+	4325	18	NNC	ENSMUSG00000024481.6	novel	5016	20	NA	NA	373	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.23389276255312	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATTTCTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	46983478	47040306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46983945_47006848_47006976_47009977_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023898_47023991_47026739_47026848_47027630_47027808_47027981_47028120_47033549_47033626_47038282
ES.16576.5	chr18	+	3990	18	NNC	ENSMUSG00000024481.6	novel	5016	20	NA	NA	422	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.19398724295203	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTTTAAAAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	46983527	47040310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46983652_47006848_47006976_47009977_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981_47028120_47033549_47033626_47038282
ES.16576.6	chr18	+	4273	18	NIC	ENSMUSG00000024481.6	novel	5016	20	NA	NA	460	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.14366012324845	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTTTAAAAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	46983565	47040310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_46983945_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981_47028120_47033549_47033626_47038282
ES.16576.7	chr18	+	4372	21	NNC	ENSMUSG00000024481.6	novel	5016	20	NA	NA	592	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.18743420870379	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTAAAAGTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	46983697	47040313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_46983945_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017485_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981_47028120_47033549_47033626_47035028_47035080_47037402_47037440_47038282
ES.16577.1	chr18	-	138	1	Intergenic	novelGene_13835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47045692	47045554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_47045600_47045700
ES.16578.1	chr18	+	3237	5	NNC	ENSMUSG00000073568.3	novel	2169	4	NA	NA	-1243	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.476468416724	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTTCAGGGTTTCT	NA	False	NA	20	True	AATAAA	-16	NA	47053638	47067293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47054703_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.11	chr18	+	124	1	Intergenic	novelGene_13836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1325	False	NA	NA	False	NA	NA	NA	47057387	47057511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_47057400_47057500
ES.16578.12	chr18	+	3724	4	FSM	ENSMUSG00000073568.3	ENSMUST00000097580.2	2169	4	-1547	-8	-1547	-2	multi-exon	FALSE	canonical	3	279	junction_2	15.9234278833282	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGGGTTTCTTTTT	1439	False	NA	24	True	AATAAA	-20	NA	47057501	47067297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.13	chr18	+	2066	3	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	2256	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	152.5	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGTTTTCAGGGTT	5242	False	NA	17	True	AATAAA	-13	NA	47061304	47067290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47061413_47061585_47061726_47065472
ES.16578.14	chr18	+	176	1	Intergenic	novelGene_13837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	5988	False	NA	NA	False	NA	NA	NA	47062050	47062226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_47062000_47062200
ES.16578.15	chr18	+	3466	1	NIC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	4779	4	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTTTTCAGGGTTTCT	7765	False	NA	20	True	AATAAA	-16	NA	47063827	47067293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_47063800_47067300
ES.16578.16	chr18	+	1882	2	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	5812	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGGGTTTTCAGGG	8798	False	NA	15	True	AATAAA	-11	NA	47064860	47067288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47064927_47065472
ES.16578.2	chr18	+	2296	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	-41	2	-41	-2	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGGGTTTCTTTTT	NA	False	NA	24	True	AATAAA	-20	NA	47054840	47067297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.3	chr18	+	2211	6	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	-10	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	115.278792498881	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGTTTTCAGGGTT	NA	False	NA	17	True	AATAAA	-13	NA	47054871	47067290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472_47065752_47065798
ES.16578.4	chr18	+	4210	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	-5	-1948	-5	1948	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATTCATTTTGTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	47054876	47069247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.5	chr18	+	2474	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	-5	-212	-5	212	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAAATTCTCAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	47054876	47067511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.6	chr18	+	2245	5	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	-3	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	125.264719693935	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGTTTTCAGGGTT	NA	False	NA	17	True	AATAAA	-13	NA	47054878	47067290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47054960_47059048_47059157_47059378_47059483_47061591_47061726_47065472
ES.16578.7	chr18	+	1977	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	1	279	1	-269	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGTCAGAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	47054882	47067020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ES.16578.9	chr18	+	2382	6	NNC	ENSMUSG00000073568.3	novel	2257	5	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.919235100115	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGGGTTTTCAGGG	NA	False	NA	15	True	AATAAA	-11	NA	47054902	47067288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47062358_47062516_47065472
ES.16579.1	chr18	-	3612	1	FSM	ENSMUSG00000117411.2	ENSMUST00000234725.2	370	1	-657	-2585	-657	2585	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGAAGGTCCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	47075900	47072288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_47072300_47075900
ES.1658.1	chr1	-	172	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAACATTTAG	NA	False	NA	NA	False	NA	NA	NA	155985218	155985046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_155985000_155985200
ES.16580.1	chr18	+	3157	1	Antisense	novelGene_ENSMUSG00000117588.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTGCTTCAACAACT	NA	False	NA	NA	False	NA	NA	NA	47084228	47087385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_47084200_47087400
ES.16581.1	chr18	-	178	1	Intergenic	novelGene_13838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAGAATCAC	NA	False	NA	NA	False	NA	NA	NA	47086607	47086429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_47086400_47086600
ES.16582.1	chr18	+	1441	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-49	-792	10	-3	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091892	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
ES.16582.12	chr18	+	5576	5	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	5	40174	1	4831	5prime_fragment	FALSE	canonical	3	1216	junction_3	106.604408914453	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGCATCTAAAT	NA	False	NA	NA	False	NA	NA	NA	47091932	47128700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545
ES.16582.13	chr18	+	2243	6	NNC	ENSMUSG00000042705.10	novel	792	6	NA	NA	1	12313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	565.299425083734	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	47091932	47181187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47179476
ES.16582.14	chr18	+	3674	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	5	-2887	1	2887	multi-exon	FALSE	canonical	3	119	junction_5	518.443593846042	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTAGAAATGCTACAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	47091932	47171761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
ES.16582.15	chr18	+	3181	6	NNC	ENSMUSG00000042705.10	novel	792	6	NA	NA	1	-22613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	565.299425083734	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCTAACTCTCTATGCT	NA	False	NA	NA	False	AATAAA	-37	NA	47091932	47197542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47194893
ES.16582.16	chr18	+	1352	5	NIC	ENSMUSG00000042705.10	novel	528	6	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	587.031675039772	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCAAGCGTACAATGT	NA	False	NA	22	True	AATAAA	-23	NA	47091934	47221058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_47091996_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ES.16582.17	chr18	+	797	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	7	-12	3	12	multi-exon	FALSE	canonical	3	119	junction_5	518.443593846042	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTCTGTAAAGGGAC	NA	False	NA	1	True	AATAAA	-8	NA	47091934	47168886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
ES.16582.18	chr18	+	1421	6	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	3	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	645.581102573488	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAATTATTTAAACTCAA	NA	False	NA	11	True	AATAAA	-12	NA	47091934	47221047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093493_47093574_47096726_47096838_47100806_47100963_47219318_47219379_47220094
ES.16582.19	chr18	+	1270	5	FSM	ENSMUSG00000042705.10	ENSMUST00000234085.2	494	5	-2	-774	1	-13	multi-exon	FALSE	canonical	3	159	junction_2	523.690271057235	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTATTTAAACTCAAGC	NA	False	NA	13	True	AATAAA	-14	NA	47091942	47221049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47123545_47123657_47219318_47219379_47220094
ES.16582.2	chr18	+	1595	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	18	-3	18	3	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTACAATGTTTTTATT	NA	False	NA	29	True	AATAAA	-30	NA	47091900	47221065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ES.16582.20	chr18	+	1448	8	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	484.581915317794	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCAAGCGTACAATGT	NA	False	NA	22	True	AATAAA	-23	NA	47091946	47221058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094_47220571_47220664
ES.16582.21	chr18	+	1576	7	NNC	ENSMUSG00000042705.10	novel	619	5	NA	NA	257	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	504.116967247351	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47092203	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47092286_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ES.16582.22	chr18	+	1365	6	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	660.409085340291	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47096811	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47096838_47100806_47100963_47123545_47123657_47218457_47218505_47219318_47219379_47220094
ES.16582.23	chr18	+	2154	1	Genic_Genomic	ENSMUSG00000042705.10	novel	NA	NA	NA	NA	70110	12	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTCTGTAAAGGGAC	NA	False	NA	1	True	AATAAA	-8	NA	47166732	47168886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_47166700_47168900
ES.16582.3	chr18	+	1472	6	NIC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	547.319504494404	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091906	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47219318_47219379_47220094
ES.16582.4	chr18	+	1673	8	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	628.991191009339	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091911	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47192593_47192689_47219318_47219379_47220094
ES.16582.5	chr18	+	1691	8	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	614.153008921512	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091917	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096142_47096262_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ES.16582.6	chr18	+	1451	7	NNC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	505.682926567847	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091924	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100849_47123545_47123657_47219318_47219379_47220094
ES.16582.7	chr18	+	5393	5	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	-2	40364	1	4641	5prime_fragment	FALSE	canonical	3	1216	junction_3	106.604408914453	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-6	NA	47091925	47128510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545
ES.16582.8	chr18	+	960	3	FSM	ENSMUSG00000042705.10	ENSMUST00000234069.2	339	3	9	-630	2	630	multi-exon	FALSE	canonical	2	3	junction_2	740	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTTCAGTATCCTGAA	NA	False	NA	NA	False	GATAAA	-22	NA	47091929	47096945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47096142
ES.16582.9	chr18	+	1449	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-17	-904	2	-3	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGCGTACAATGTT	NA	False	NA	23	True	AATAAA	-24	NA	47091929	47221059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ES.16583.1	chr18	-	2395	1	Antisense	novelGene_ENSMUSG00000042705.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCCAAACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	47095041	47092646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_47092600_47095000
ES.16583.2	chr18	-	2898	2	Antisense	novelGene_ENSMUSG00000042705.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47095779	47092675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_47093992_47094197
ES.16583.3	chr18	-	2252	2	Antisense	novelGene_ENSMUSG00000042705.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47095041	47092675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_47094043_47094156
ES.16584.1	chr18	-	2194	1	Intergenic	novelGene_13839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47114177	47111983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_47112000_47114200
ES.16585.1	chr18	+	465	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	2	48	2	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTGTCTCTGACCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	47245207	47245672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_47245200_47245700
ES.16586.1	chr18	+	224	1	Intergenic	novelGene_13840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATAAGGAAACAGACTC	NA	False	NA	NA	False	NA	NA	NA	47461385	47461609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_47461400_47461600
ES.16587.1	chr18	-	4705	19	FSM	ENSMUSG00000019647.17	ENSMUST00000019791.14	6856	19	-39	2190	-1	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.06138739858571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTGGAGCTGGAAT	NA	False	NA	NA	False	AATAAA	-11	NA	47501936	47380510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_47382652_47403675_47403841_47409652_47409674_47412182_47412242_47414186_47414268_47414358_47414500_47414861_47415039_47416375_47416532_47420489_47420622_47423042_47423261_47424162_47424252_47424954_47425075_47427086_47427178_47431252_47431355_47432143_47432207_47433150_47433212_47437170_47437289_47439422_47439561_47501304
ES.16587.2	chr18	-	3464	17	FSM	ENSMUSG00000019647.17	ENSMUST00000151382.8	3328	17	-38	-98	-38	83	multi-exon	FALSE	canonical	0	0	junction_14	0.998044963916957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	47501975	47408626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_47409674_47412182_47412242_47414186_47414268_47414358_47414500_47414861_47415039_47416375_47416532_47420489_47420622_47423042_47423261_47424162_47424252_47424954_47425075_47427086_47427178_47431252_47431355_47432143_47432207_47433150_47433212_47437170_47437289_47439422_47439561_47501304
ES.16588.1	chr18	+	1346	3	NNC	ENSMUSG00000118180.2	novel	1838	2	NA	NA	-60	31834	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCCTGTCTGTCACTGT	NA	False	NA	NA	False	AATAAA	-25	NA	47610510	47659312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_47610656_47657230_47657443_47658323
ES.16589.1	chr18	+	1775	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	-1	-27	-1	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2310	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATAGCTGTTACTATT	NA	False	NA	NA	False	NA	NA	NA	48179712	48181487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_48179700_48181500
ES.16589.2	chr18	+	1593	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	0	154	0	-154	mono-exon	FALSE	NA	NA	NA	NA	NA	2304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCATTGTTTCTGTCAC	NA	False	NA	NA	False	NA	NA	NA	48179713	48181306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_48179700_48181300
ES.16589.3	chr18	+	1480	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	48179715	48181442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_48180380_48180626
ES.16589.4	chr18	+	1705	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	0	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACAGACATAGCTG	NA	False	NA	NA	False	NA	NA	NA	48179715	48181479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_48180005_48180063
ES.16589.5	chr18	+	1507	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	48179715	48181445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_48180268_48180490
ES.16589.6	chr18	+	1586	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	48179715	48181445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_48180143_48180286
ES.16589.7	chr18	+	1649	2	NNC	ENSMUSG00000059040.6	novel	1791	2	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAACAGACA	NA	False	NA	NA	False	AATAAA	-43	NA	48179715	48181473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_48180891_48180999
ES.1659.1	chr1	+	182	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTCTCAGCTGTCCTCA	NA	False	NA	NA	False	NA	NA	NA	155990042	155990224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_155990000_155990200
ES.16590.1	chr18	-	4002	2	Intergenic	novelGene_13841	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	48845435	48839026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_48842383_48844789
ES.16591.1	chr18	-	1997	3	Intergenic	novelGene_13842	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATTCGTCTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	49692080	49666689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_49668442_49686846_49686989_49691977
ES.16591.2	chr18	-	5869	1	Intergenic	novelGene_13843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	49686658	49680789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_49680800_49686700
ES.16592.1	chr18	+	2760	1	Intergenic	novelGene_13845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	337	False	NA	NA	False	NA	NA	NA	49885266	49888026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_49885300_49888000
ES.16593.1	chr18	-	2934	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	-14	-1436	-14	2	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49888648	49829209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
ES.16593.10	chr18	-	2494	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	-7	658	-7	-658	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGCTCTTTAAGAACA	NA	False	NA	8	True	AATAAA	-24	NA	49888675	49829869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.11	chr18	-	2069	3	NIC	ENSMUSG00000024505.17	novel	1389	4	NA	NA	-3	662	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	111.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888637	49829877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_49831568_49833325_49833455_49888387
ES.16593.12	chr18	-	2557	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-7	662	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	93.7259598806838	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888641	49829877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49843562_49843668_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.13	chr18	-	4937	6	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	6	662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.2104616213776	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTATGATTGCTCTT	NA	False	NA	0	True	AATAAA	-16	NA	49888628	49829877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49835953_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.14	chr18	-	2302	6	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-3	661	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	79.927467118632	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888637	49829878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49856688_49856737_49857179_49857275_49861435_49861527_49888387
ES.16593.15	chr18	-	2235	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-79	-767	-45	661	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888713	49829878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
ES.16593.16	chr18	-	1844	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	-26	1327	-26	1	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTATAAGTAGCTCTAC	NA	False	NA	-7	True	AATAAA	-20	NA	49888694	49830538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.17	chr18	-	1515	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	-19	-107	15	1	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTATAAGTAGCTCTAC	NA	False	NA	-7	True	AATAAA	-20	NA	49888653	49830538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
ES.16593.18	chr18	-	3826	8	NNC	ENSMUSG00000024505.17	novel	1911	8	NA	NA	15	1	intron_retention	FALSE	canonical	0	0	junction_6	95.7076756779386	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTATAAGTAGCTCTAC	NA	False	NA	-7	True	AATAAA	-20	NA	49888653	49830538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49862394_49866137_49866229_49867046_49868112_49888387
ES.16593.19	chr18	-	3107	9	NNC	ENSMUSG00000024505.17	novel	1911	8	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.5644215019176	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTTCTATAAGTAGCT	NA	False	NA	-11	True	AATAAA	-16	NA	49888648	49830542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49862236_49862394_49866137_49866229_49867046_49868112_49888387
ES.16593.2	chr18	-	3129	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	18	-2	-16	2	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49888650	49829209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.20	chr18	-	6217	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-13	-5	intron_retention	FALSE	canonical	0	0	junction_3	102.144777426727	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATATTTCTATAAGTAG	NA	False	NA	-13	True	AATAAA	-14	NA	49888647	49830544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49843562_49843668_49845996_49846157_49856688_49856882_49857179_49861527_49888387
ES.16593.21	chr18	-	2899	8	NNC	ENSMUSG00000024505.17	novel	1911	8	NA	NA	-12682	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.7076756779386	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATATTTCTATAAGT	NA	False	NA	-15	True	AATAAA	-12	NA	49901350	49830546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49862236_49862394_49866137_49866229_49900228
ES.16593.22	chr18	-	1937	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.8060830822112	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATATTTCTATAAGT	NA	False	NA	-15	True	AATAAA	-12	NA	49888635	49830546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49845996_49846157_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.23	chr18	-	2752	7	NNC	ENSMUSG00000024505.17	novel	1911	8	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.6585362398754	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATATTTCTATAAGT	NA	False	NA	-15	True	AATAAA	-12	NA	49888647	49830546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49866137_49866229_49867046_49868112_49888387
ES.16593.24	chr18	-	193	1	Intergenic	novelGene_13844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTTATTGCCTGATT	NA	False	NA	NA	False	NA	NA	NA	49847074	49846881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_49846900_49847100
ES.16593.3	chr18	-	7546	2	ISM	ENSMUSG00000024505.17	ENSMUST00000139852.2	1911	8	28660	-1330	28660	2	3prime_fragment	FALSE	canonical	3	223	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	49838513	49829209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_49831568_49833325
ES.16593.4	chr18	-	3044	6	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.826844743968	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	49888654	49829210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49843562_49843668_49857179_49857275_49861435_49861527_49888387
ES.16593.6	chr18	-	6686	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.4622036903276	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	49888647	49829212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49835953_49856688_49856882_49857179_49857275_49861435_49861527_49867046_49868112_49888387
ES.16593.7	chr18	-	3311	7	NNC	ENSMUSG00000024505.17	novel	3145	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.8060830822112	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	49888675	49829212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_49831568_49833325_49833455_49845996_49846157_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.8	chr18	-	2623	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	-1	523	-1	-523	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTTCTTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	49888669	49829734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ES.16593.9	chr18	-	2299	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	-20	-795	14	-639	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGACAAATGATACTAT	NA	False	NA	27	True	AATAAA	-43	NA	49888654	49829850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
ES.16594.1	chr18	-	187	1	Intergenic	novelGene_13846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAGATAGGGTATAG	NA	False	NA	NA	False	NA	NA	NA	49954706	49954519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_49954500_49954700
ES.16595.1	chr18	+	11519	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-72	10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	34.3859681847745	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTGTTTTAAGAAAT	NA	False	NA	24	True	AATAAA	-25	NA	49965664	50097331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985496_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50036480_50036595_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.10	chr18	+	11413	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-70	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	28.2094229283428	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTTCGCATGCTTT	NA	False	NA	11	True	AATAAA	-12	NA	49965666	50097318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028021_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.11	chr18	+	10428	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-70	961	-70	-961	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGTTAAATTTTGTT	NA	False	NA	NA	False	ATTAAA	-28	NA	49965666	50096360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.12	chr18	+	11505	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.9476782414181	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	NA	False	NA	13	True	AATAAA	-14	NA	49965666	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49980618_49980736_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.13	chr18	+	10287	32	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-70	41129	-70	-8789	intron_retention	FALSE	canonical	3	56	junction_4	17.4817282343696	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTCTATAATTAAACTAT	NA	False	NA	NA	False	AATAAA	-21	NA	49965666	50056192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896
ES.16595.14	chr18	+	10775	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-70	-728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	31.355047345696	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAATGCCTCTATCTTA	NA	False	NA	NA	False	TATAAA	-22	NA	49965666	50096593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50036480_50036595_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.16	chr18	+	9287	37	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-70	6924	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	25.2723895356079	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTGGTATAAAATATT	NA	False	NA	NA	False	AATAAA	-19	NA	49965666	50073265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615
ES.16595.17	chr18	+	8336	33	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-40	-10758	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	26.3702417212566	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTATAGTCCATGCTTA	NA	False	NA	NA	False	NA	NA	NA	49965696	50054223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50020574_50020623_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896
ES.16595.18	chr18	+	5362	20	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-39	75332	-39	-42992	5prime_fragment	FALSE	canonical	3	56	junction_4	9.41561148371089	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGTTTATGTCATTC	NA	False	NA	NA	False	TATAAA	-15	NA	49965697	50021989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782
ES.16595.19	chr18	+	11146	42	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	28.464010276544	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	NA	False	NA	13	True	AATAAA	-14	NA	49965716	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.2	chr18	+	12417	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	28.2162044756437	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATCACTGTATTGGTT	NA	False	NA	NA	False	NA	NA	NA	49965665	50098353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992347_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.20	chr18	+	8916	34	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-20	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	30.7552618923649	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCGCATGCTTTT	NA	False	NA	12	True	AATAAA	-13	NA	49965716	50097319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.22	chr18	+	11401	44	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_33	30.2545894680986	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	49965717	50097321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50058985_50059049_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.23	chr18	+	11221	42	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	30.4180470242744	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	49965717	50097321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50091463_50091517_50094124_50094343_50095239
ES.16595.24	chr18	+	12410	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8409497094769	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTGGCTCTTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	49965718	50098539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966099_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.26	chr18	+	5363	21	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-11	74726	-11	-42386	5prime_fragment	FALSE	canonical	3	56	junction_4	9.64611320688286	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	49965725	50022595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529
ES.16595.27	chr18	+	6695	20	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-8	73968	-8	-41628	intron_retention	FALSE	canonical	3	56	junction_4	9.41561148371089	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGATTTTTTTCTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	49965728	50023353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782
ES.16595.3	chr18	+	10766	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-695	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.331856556264	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTCTGTTTTGTGC	NA	False	NA	NA	False	TTTAAA	-35	NA	49965665	50096626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976615_49976687_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.30	chr18	+	11148	42	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	31.2122895608632	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	NA	False	NA	13	True	AATAAA	-14	NA	49965734	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49990289_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068398_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.32	chr18	+	10920	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	2	-399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.5715003949481	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAATTGTATTTCATAT	NA	False	NA	NA	False	TATAAA	-18	NA	49965738	50096922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981866_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004857_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.33	chr18	+	11290	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	27.3372321758906	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	49965740	50097321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.34	chr18	+	9724	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	5	1590	5	-1590	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTTTTCTCATTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	49965741	50095731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.35	chr18	+	12149	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	8	-838	8	-381	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGTTAGTGTAATCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	49965744	50098159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.36	chr18	+	11505	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	10	-196	10	196	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATACAAATACACTTAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	49965746	50097517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.37	chr18	+	10576	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	11	-770	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	32.750445358401	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTATTTTATTATAA	NA	False	NA	NA	False	AATAAA	-23	NA	49965747	50096551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50058985_50059049_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.38	chr18	+	11519	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	28	196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	31.355047345696	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATACAAATACACTTAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	49965764	50097517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50036480_50036513_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.4	chr18	+	11400	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-71	-10	-71	10	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTGTTTTAAGAAAT	NA	False	NA	24	True	AATAAA	-25	NA	49965665	50097331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.40	chr18	+	7650	31	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	7771	43135	7444	-10795	internal_fragment	FALSE	canonical	3	56	junction_3	17.2157550581501	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCAGGCTGTCCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	49973507	50054186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896
ES.16595.41	chr18	+	1663	1	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	9180	-88075	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGAAAAACTTGGT	NA	False	NA	NA	False	NA	NA	NA	49975243	49976906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_49975200_49976900
ES.16595.42	chr18	+	7490	6	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-30106	-54295	intron_retention	FALSE	canonical	3	72	junction_4	7.50999334220743	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAGGGGGGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	49997056	50010686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636
ES.16595.43	chr18	+	7544	26	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-15851	185	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	28.6561407031722	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATAGAAAATAATACAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	50011311	50097506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028121_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.44	chr18	+	6930	27	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-15182	119	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	33.9119334566644	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCTTCTTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	50011980	50097440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50012433_50013801_50013910_50020574_50020623_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.45	chr18	+	6652	26	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-15078	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.6390013327035	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTTCGCATGCTTT	NA	False	NA	11	True	AATAAA	-12	NA	50012084	50097318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064981_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.47	chr18	+	6149	25	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-13355	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.3357006620489	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	50013807	50097321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50036002_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.49	chr18	+	5937	22	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	57941	3	-3485	-3	3prime_fragment	FALSE	canonical	3	97	junction_6	12.9117008229199	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTTCGCATGCTTT	3934	False	NA	11	True	AATAAA	-12	NA	50023677	50097318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.5	chr18	+	11500	45	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	35.0548198192771	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	NA	False	NA	13	True	AATAAA	-14	NA	49965665	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50020574_50020623_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50058985_50059049_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.50	chr18	+	5214	22	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	57941	726	-3485	-726	3prime_fragment	FALSE	canonical	3	97	junction_6	12.9117008229199	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGCCTCTATCTTAAA	3934	False	NA	NA	False	TATAAA	-24	NA	50023677	50096595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.51	chr18	+	4536	22	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-3469	-1384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	28.5171707036885	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAAACTGCTGTTGGGA	3950	False	NA	NA	False	TATAAA	-23	NA	50023693	50095937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084387_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.52	chr18	+	5571	21	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-879	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	36.1846307152636	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	1943	False	NA	13	True	AATAAA	-14	NA	50026283	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50058985_50059049_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.53	chr18	+	4063	21	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-380	-1010	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	36.1846307152636	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGGCATTTTATATTA	487	False	NA	NA	False	AATAAA	-14	NA	50026782	50096311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50058985_50059049_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.54	chr18	+	4458	20	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	1049	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_9	38.9861115976821	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	1916	False	NA	14	True	AATAAA	-15	NA	50028211	50097321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50054567_50054761_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.55	chr18	+	7174	8	NIC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-75	-963	intron_retention	FALSE	canonical	3	115	junction_1	9.06664665864139	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTAGTTAAATTTTG	2162	False	NA	NA	False	ATTAAA	-26	NA	50055704	50096358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_50055783_50064977_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50091517_50094124_50094343_50095239
ES.16595.56	chr18	+	2057	1	Intergenic	novelGene_13850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50074851	50076908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_50074900_50076900
ES.16595.57	chr18	+	3721	5	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	117738	630	309	-630	intron_retention	FALSE	canonical	3	123	junction_1	6.18465843842649	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATTTTTAGCCAATG	7661	False	NA	NA	False	TATAAA	-18	NA	50083474	50096691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124
ES.16595.58	chr18	+	1414	5	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	123144	1127	-161	-1127	3prime_fragment	FALSE	canonical	3	126	junction_1	4.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTAAATTATTTTAA	4973	False	NA	NA	False	TATAAA	-18	NA	50088880	50096194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.59	chr18	+	177	1	FSM	ENSMUSG00000037416.14	ENSMUST00000181042.2	3669	1	322	3170	322	1762	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAACAACAAAAAAAG	5456	False	NA	NA	False	NA	NA	NA	50089363	50089540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50089400_50089500
ES.16595.6	chr18	+	10672	43	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	31.0114820371518	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTCTGTTTTGTGCT	NA	False	NA	NA	False	TTTAAA	-36	NA	49965665	50096627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981759_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028047_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.60	chr18	+	303	1	FSM	ENSMUSG00000037416.14	ENSMUST00000181042.2	3669	1	323	3043	323	1889	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGTTATGCATTGTG	5457	False	NA	NA	False	AATAAA	-36	NA	50089364	50089667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50089400_50089700
ES.16595.61	chr18	+	2603	3	ISM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	125475	2	2170	-2	3prime_fragment	FALSE	canonical	3	131	junction_2	3.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTCGCATGCTTTT	7304	False	NA	12	True	AATAAA	-13	NA	50091211	50097319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50091517_50094124_50094343_50095239
ES.16595.62	chr18	+	4512	2	ISM	ENSMUSG00000037416.14	ENSMUST00000041772.6	12247	43	127687	-619	4709	619	3prime_fragment	FALSE	canonical	3	131	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTAAATACCCAAAACC	9843	False	NA	NA	False	NA	NA	NA	50093750	50099159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50094343_50095239
ES.16595.7	chr18	+	4927	21	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-42993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.0649247282083	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTGTTTATGTCATT	NA	False	NA	NA	False	TATAAA	-14	NA	49965665	50021988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49965725_49973448_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50020574_50020623_50021782
ES.16595.8	chr18	+	11437	44	NNC	ENSMUSG00000037416.14	novel	11319	43	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	30.5738871320694	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCGCATGCTTTTG	NA	False	NA	13	True	AATAAA	-14	NA	49965665	50097320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50020574_50020623_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16595.9	chr18	+	10664	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	-70	725	-70	-725	multi-exon	FALSE	canonical	3	56	junction_4	23.9744407551836	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCCTCTATCTTAAAT	NA	False	NA	NA	False	TATAAA	-25	NA	49965666	50096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ES.16596.1	chr18	-	2419	1	Intergenic	novelGene_13847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50018714	50016295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_50016300_50018700
ES.16597.1	chr18	-	586	1	Intergenic	novelGene_13848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAGAATGAGCTTA	NA	False	NA	NA	False	NA	NA	NA	50040263	50039677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_50039700_50040300
ES.16598.1	chr18	-	158	1	Intergenic	novelGene_13849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	50060674	50060516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_50060500_50060700
ES.16599.1	chr18	+	1745	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	35	-778	-29	-3	multi-exon	FALSE	canonical	3	36	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCGGGATTTAGATTGT	NA	False	NA	8	True	AATAAA	-21	NA	50112528	50224846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50112694_50223266
ES.16599.2	chr18	+	3813	4	NNC	ENSMUSG00000062210.14	novel	2385	3	NA	NA	-24	466	intron_retention	FALSE	canonical	0	0	junction_1	0	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATGATGCCTGTGGG	NA	False	NA	NA	False	AGTAAA	-20	NA	50112533	50226762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50112694_50133895_50133981_50136004_50136077_50223266
ES.16599.3	chr18	+	3191	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	52	-2241	-12	13	multi-exon	FALSE	canonical	3	36	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	50112545	50226309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50112694_50223266
ES.16599.4	chr18	+	4179	3	NNC	ENSMUSG00000062210.14	novel	2385	3	NA	NA	-12	1061	intron_retention	FALSE	non_canonical	0	0	junction_2	18	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACGTTTATGATATGA	NA	False	NA	NA	False	AATAAA	-18	NA	50112545	50227357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50112694_50223266_50226972_50227031
ES.16599.5	chr18	+	2082	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	81	-1161	17	380	multi-exon	FALSE	canonical	3	36	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGGTGTGATGTCATA	NA	False	NA	NA	False	AGTAAA	-27	NA	50112574	50225229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50112694_50223266
ES.16599.6	chr18	+	158	1	Intergenic	novelGene_13851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGAATGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	50155084	50155242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_50155100_50155200
ES.16599.7	chr18	+	3179	2	NNC	ENSMUSG00000062210.14	novel	1002	2	NA	NA	11214	4	intron_retention	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAATTGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	50197562	50226300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50197708_50223266
ES.16599.8	chr18	+	3100	2	NNC	ENSMUSG00000062210.14	novel	1002	2	NA	NA	29823	13	intron_retention	FALSE	canonical	1	1	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	50216171	50226309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50216229_50223266
ES.16599.9	chr18	+	2484	2	NNC	ENSMUSG00000062210.14	novel	1921	2	NA	NA	37414	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	50223762	50226309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50225971_50226033
ES.166.1	chr1	+	142	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	20853103	20853245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_20853100_20853200
ES.1660.1	chr1	-	209	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	156015667	156015458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156015500_156015700
ES.16600.1	chr18	-	6603	1	Antisense	novelGene_ENSMUSG00000062210.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTTGTTTGCTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	50165946	50159343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_50159300_50165900
ES.16601.1	chr18	+	2677	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.7116652542247	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTCCTCTTTGCAT	NA	False	NA	14	True	AATAAA	-23	NA	50261273	50329336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275638_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.11	chr18	+	2385	22	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	78	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	109.269642972252	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATCAACCAAG	NA	False	NA	-15	True	NA	NA	NA	50261345	50329234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50306730_50306797_50310238_50310316_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.12	chr18	+	2557	24	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.6176774141917	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCCCTTCCTGCTCCT	NA	False	NA	6	True	AATAAA	-15	NA	50261345	50329328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261436_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.13	chr18	+	4669	23	NIC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	86	1	intron_retention	FALSE	canonical	3	285	junction_3	18.2714269098588	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCTCCTCTTTGCATT	NA	False	NA	15	True	AATAAA	-24	NA	50261353	50329337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.14	chr18	+	2469	24	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	89	-102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	64.6690279484963	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATCAACCAAG	NA	False	NA	-15	True	NA	NA	NA	50261356	50329234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316341_50324778_50324907_50328921
ES.16601.15	chr18	+	2485	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	89	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.4622198663094	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAAAAATCAACCAA	NA	False	NA	-16	True	NA	NA	NA	50261356	50329233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275638_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310303_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.16	chr18	+	2582	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	91	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.7116652542247	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCTTCCTGCTCCTC	NA	False	NA	7	True	AATAAA	-16	NA	50261358	50329329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273472_50275646_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.17	chr18	+	2090	17	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	18187	11	4019	-11	3prime_fragment	FALSE	canonical	3	287	junction_5	16.0351177108246	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTTGTCTCCCTTCCTGCT	1067	False	NA	3	True	AATAAA	-12	NA	50279454	50329325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.18	chr18	+	4882	2	FSM	ENSMUSG00000024507.7	ENSMUST00000127325.2	634	2	-3954	-294	-3954	-3	multi-exon	FALSE	canonical	3	325	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTCCTGCTCCTCTTTG	NA	False	NA	11	True	AATAAA	-20	NA	50320436	50329333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50324907_50328921
ES.16601.2	chr18	+	2679	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	9	-4	9	4	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTCTTTGCATTGAT	NA	False	NA	18	True	AATAAA	-27	NA	50261276	50329340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.3	chr18	+	2636	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	31	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.732427965336	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCTTCCTGCTCCTC	NA	False	NA	7	True	AATAAA	-16	NA	50261298	50329329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288301_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.4	chr18	+	2545	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	37	102	37	-102	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATCAACCAAG	NA	False	NA	-15	True	NA	NA	NA	50261304	50329234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.7	chr18	+	2545	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	38	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.7116652542247	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATCAACCAAG	NA	False	NA	-15	True	NA	NA	NA	50261305	50329234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275636_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16601.8	chr18	+	2651	23	NNC	ENSMUSG00000024507.7	novel	2684	24	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.5666390880355	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCCCTTCCTGCTCCT	NA	False	NA	6	True	AATAAA	-15	NA	50261305	50329328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275634_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305084_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ES.16602.1	chr18	-	537	1	Intergenic	novelGene_13852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGACGATCTGGC	NA	False	NA	NA	False	NA	NA	NA	50286109	50285572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_50285600_50286100
ES.16603.1	chr18	-	5424	8	Antisense	novelGene_ENSMUSG00000024507.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	50310285	50288585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_50293329_50295166_50295270_50297681_50297915_50299946_50300001_50303784_50303858_50305093_50305199_50306730_50306794_50310235
ES.16603.2	chr18	-	4346	8	Antisense	novelGene_ENSMUSG00000024507.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50310285	50289660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_50293329_50295166_50295270_50297681_50297915_50299946_50300001_50303784_50303858_50305093_50305199_50306730_50306788_50310232
ES.16603.3	chr18	-	323	1	Intergenic	novelGene_13853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAATCAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	50305971	50305648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_50305600_50306000
ES.16603.4	chr18	-	3000	1	Antisense	novelGene_ENSMUSG00000024507.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	50308799	50305799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_50305800_50308800
ES.16604.1	chr18	+	178	1	Intergenic	novelGene_13854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	51467555	51467733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_51467600_51467700
ES.16605.1	chr18	+	1899	7	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-48	1193	-48	-1193	intron_retention	FALSE	canonical	3	351	junction_5	86.7576445559058	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATTGCTTGTTTTT	NA	False	NA	2	True	TTTAAA	-36	NA	52598716	52623810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089
ES.16605.11	chr18	+	5406	7	NIC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	0	-1057	intron_retention	FALSE	canonical	3	351	junction_4	89.2817014971277	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTAGGTTTTCTCATT	NA	False	NA	NA	False	CATAAA	-18	NA	52598764	52623946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.12	chr18	+	2593	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	194.53691005822	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTATGTGGCCTGCAT	NA	False	NA	1	True	ATTAAA	-12	NA	52598765	52625002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624856
ES.16605.13	chr18	+	2589	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	194.53691005822	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTGGCCTGCATA	NA	False	NA	2	True	ATTAAA	-13	NA	52598765	52625003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624827_52624892
ES.16605.14	chr18	+	5364	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	1	2774	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_8	183.6769837922	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCACATTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	52598765	52627777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624860
ES.16605.15	chr18	+	3244	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	6	2	intron_retention	FALSE	canonical	3	36	junction_7	189.684593201344	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	False	NA	4	True	ATTAAA	-15	NA	52598770	52625005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52622044_52623089_52623128_52623515_52624796_52624860
ES.16605.16	chr18	+	2030	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	7	-665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	202.535963044914	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCAGTTACTTGTGACT	NA	False	NA	3	True	AATAAA	-15	NA	52598771	52624338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623174_52623515
ES.16605.17	chr18	+	3596	10	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	9	1938	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	235.912413125437	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAAATGTTGAACTTA	NA	False	NA	NA	False	NA	NA	NA	52598773	52626941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624856_52625249_52626176
ES.16605.18	chr18	+	1842	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	9	805	9	-805	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTAGGACATATT	NA	False	NA	NA	False	AATAAA	-9	NA	52598773	52624198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.19	chr18	+	1457	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	9	1190	9	-1190	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTGCTTGTTTTTCTT	NA	False	NA	5	True	TATAAA	-1	NA	52598773	52623813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.2	chr18	+	1636	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-38	1058	-38	-1058	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTAGGTTTTCTCAT	NA	False	NA	NA	False	CATAAA	-17	NA	52598726	52623945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.20	chr18	+	4463	10	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	9	1947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	235.912413125437	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAACTTATTTCAACAA	NA	False	NA	NA	False	NA	NA	NA	52598773	52626950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624856_52626060_52626129
ES.16605.21	chr18	+	5290	10	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	9	2774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	235.912413125437	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCACATTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	52598773	52627777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624856_52626060_52626129
ES.16605.22	chr18	+	1532	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	10	-1195	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	236.671152392935	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATATTGCTTGTTT	NA	False	NA	0	True	TTTAAA	-34	NA	52598774	52623808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52604890_52604972_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.23	chr18	+	1513	7	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	11	1520	11	-1520	5prime_fragment	FALSE	canonical	3	351	junction_5	86.7576445559058	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTTGTCGTTTTTGCT	NA	False	NA	NA	False	AAGAAA	-27	NA	52598775	52623483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089
ES.16605.24	chr18	+	1535	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	11	-1059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.146104661983	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATTTTAGGTTTTCTCA	NA	False	NA	NA	False	CATAAA	-16	NA	52598775	52623944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608670_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52621599_52621646_52622044_52623089_52623128_52623515
ES.16605.25	chr18	+	5788	7	NIC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	11	-664	intron_retention	FALSE	canonical	3	351	junction_4	89.2817014971277	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGTTACTTGTGACTT	NA	False	NA	4	True	AATAAA	-16	NA	52598775	52624339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.26	chr18	+	1452	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	13	-1060	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	193.859195693942	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAATTTTAGGTTTTCTC	NA	False	NA	NA	False	CATAAA	-15	NA	52598777	52623943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52621913_52623089_52623128_52623515
ES.16605.27	chr18	+	3660	5	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	16021	660	-5736	-660	3prime_fragment	FALSE	canonical	3	351	junction_2	89.1781924015059	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTACTTGTGACTTATCT	NA	False	NA	8	True	AATAAA	-20	NA	52614785	52624343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.3	chr18	+	1509	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-32	-1193	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	201.090191968983	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATTGCTTGTTTTT	NA	False	NA	2	True	TTTAAA	-36	NA	52598732	52623810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620680_52621322_52622044_52623089_52623128_52623515
ES.16605.5	chr18	+	2031	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-30	655	-30	-655	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGACTTATCTTTGCA	NA	False	NA	13	True	AATAAA	-25	NA	52598734	52624348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.6	chr18	+	2617	9	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_8	183.6769837922	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTGGCCTGCATA	NA	False	NA	2	True	ATTAAA	-13	NA	52598738	52625003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515_52624796_52624860
ES.16605.7	chr18	+	1534	8	NNC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-25	-1193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	202.535963044914	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATTGCTTGTTTTT	NA	False	NA	2	True	TTTAAA	-36	NA	52598739	52623810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623174_52623515
ES.16605.8	chr18	+	1933	7	NIC	ENSMUSG00000024528.9	novel	2656	8	NA	NA	-10	-661	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	218.710933019413	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTACTTGTGACTTATC	NA	False	NA	7	True	AATAAA	-19	NA	52598754	52624342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_52598858_52608667_52608757_52609371_52609445_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16605.9	chr18	+	1367	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	-10	1299	-10	-1299	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGCTGCCTCTTTGCA	NA	False	NA	NA	False	NA	NA	NA	52598754	52623704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ES.16606.1	chr18	+	2119	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	-55	3	-55	-3	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACGTTAGGGATCTTTT	NA	False	NA	35	True	AATAAA	-15	NA	53309332	53353934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.10	chr18	+	2015	16	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-4	-35	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	372.904360690811	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATATTAGTAATAAATT	NA	False	NA	3	True	AATAAA	-14	NA	53309426	53353902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53322845_53326818_53326841_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.11	chr18	+	1501	14	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-4	-363	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	335.886075360831	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACATGTGGGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	53309426	53353574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53322845_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.13	chr18	+	5289	14	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_12	261.619761119614	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	False	NA	38	True	AATAAA	-18	NA	53309426	53353937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53322845_53327501_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.14	chr18	+	6323	14	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-4	-362	intron_retention	FALSE	canonical	0	0	junction_12	261.862423791736	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGTGGGTTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	53309426	53353575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.18	chr18	+	5942	14	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-4	-30	intron_retention	FALSE	canonical	0	0	junction_12	338.621151175866	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATAAATTATTTG	NA	False	NA	8	True	AATAAA	-19	NA	53309426	53353907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53322845_53326818_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.19	chr18	+	6654	14	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-3	-30	intron_retention	FALSE	canonical	0	0	junction_12	261.862423791736	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATAAATTATTTG	NA	False	NA	8	True	AATAAA	-19	NA	53309427	53353907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.23	chr18	+	9845	12	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-1	-362	intron_retention	FALSE	canonical	0	0	junction_10	280.87010615038	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGTGGGTTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	53309429	53353575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.24	chr18	+	9910	13	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-1	-33	intron_retention	FALSE	canonical	0	0	junction_11	269.271380560372	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTAGTAATAAATTAT	NA	False	NA	5	True	AATAAA	-16	NA	53309429	53353904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.25	chr18	+	1643	15	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-1	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	334.237641537287	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTACATGTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	53309429	53353573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351415_53353443
ES.16606.26	chr18	+	1312	10	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	45	9786	2	-1753	5prime_fragment	FALSE	canonical	3	705	junction_9	104.213456158235	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATTTGTACTGTATTA	NA	False	NA	NA	False	ATTAAA	-29	NA	53309432	53344151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770
ES.16606.28	chr18	+	855	7	ISM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	51	17626	-1	146	5prime_fragment	FALSE	canonical	3	861	junction_5	68.4178339323893	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCAGGGTTATGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	53309438	53336311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112
ES.16606.29	chr18	+	1782	13	NIC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	351.452106741919	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACGTTAGGGATCTTTT	NA	False	NA	35	True	AATAAA	-15	NA	53309438	53353934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53309560_53322726_53322845_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.3	chr18	+	2187	15	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-15	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	328.073784632764	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTAGTAATAAATTAT	NA	False	NA	5	True	AATAAA	-16	NA	53309372	53353904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53309698_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.32	chr18	+	1666	14	NNC	ENSMUSG00000034484.9	novel	576	4	NA	NA	197	-359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	379.408820738841	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGGGTTTTTTATAT	NA	False	NA	NA	False	AATAAA	-21	NA	53309657	53353578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53309952_53322726_53322845_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.33	chr18	+	3864	12	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	15518	-362	intron_retention	FALSE	non_canonical	0	0	junction_3	394.718541840546	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACATGTGGGTTTTTTA	1599	False	NA	NA	False	AATAAA	-18	NA	53324978	53353575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53327666_53330926_53330994_53331257_53331302_53332826_53332971_53336112_53336192_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.4	chr18	+	1757	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	-5	315	-5	-315	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACAAGCTGCATGTCCT	NA	False	NA	NA	False	TATAAA	-20	NA	53309382	53353622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ES.16606.8	chr18	+	2015	15	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	-5	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	334.461652418892	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATATTAGTAATAAATT	NA	False	NA	3	True	AATAAA	-14	NA	53309425	53353902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349431_53349597_53351173_53351255_53351360_53351433_53353443
ES.16607.1	chr18	+	2048	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	-91	20	-91	-20	multi-exon	TRUE	canonical	3	19	junction_3	2.70801280154532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAACAAAAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	53378642	53523972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ES.16607.2	chr18	+	1820	6	NIC	ENSMUSG00000024535.17	novel	1977	7	NA	NA	-3	-20	intron_retention	FALSE	canonical	0	0	junction_4	9.74474217206387	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAACAAAAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	53378837	53523972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53518249_53518315_53522588
ES.16608.1	chr18	-	2026	1	Intergenic	novelGene_13855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTAAATCAGTGTATA	NA	False	NA	NA	False	NA	NA	NA	53480316	53478290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_53478300_53480300
ES.16609.1	chr18	-	170	1	Intergenic	novelGene_13856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGAGTGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	53487638	53487468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_53487500_53487600
ES.1661.1	chr1	+	205	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATCTCTGTGGTCTCA	4958	False	NA	NA	False	AATAAA	-22	NA	156072790	156072995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156072800_156073000
ES.16610.1	chr18	-	1336	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	67	0	67	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551120	53539403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ES.16610.2	chr18	-	2729	2	ISM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	6995	1	6995	-1	intron_retention	FALSE	canonical	3	395	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGCAAGACTTT	NA	False	NA	-12	True	ATTAAA	-19	NA	53544192	53539404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53540138_53542196
ES.16610.3	chr18	-	1363	6	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	81	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.767150471607	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTGCAAGACTTT	NA	False	NA	-12	True	ATTAAA	-19	NA	53551106	53539404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53540138_53542196_53542382_53544058_53544149_53544257_53544304_53544577_53544692_53550911
ES.16610.4	chr18	-	1336	5	NNC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	106	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.614820991563	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACTTTTTTTTGCAAG	NA	False	NA	-17	True	ATTAAA	-14	NA	53551081	53539409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53540138_53542196_53542382_53544058_53544198_53544577_53544692_53550911
ES.16610.5	chr18	-	1229	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	74	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	180.261538388593	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACTTTTTTTTGCAAG	NA	False	NA	-17	True	ATTAAA	-14	NA	53551113	53539409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53540138_53542196_53542382_53544577_53544692_53550911
ES.16611.1	chr18	+	157	1	Intergenic	novelGene_13857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	53586156	53586313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_53586200_53586300
ES.16612.1	chr18	+	3137	9	NNC	ENSMUSG00000069378.15	novel	2631	7	NA	NA	168	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.85695682505013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCGCTGTCGTCGTTTC	NA	False	NA	NA	False	AATAAA	-44	NA	53596822	53708998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53597121_53597624_53598235_53606492_53606801_53669683_53669812_53673269_53673395_53685118_53685462_53701227_53701405_53705183_53705360_53708026
ES.16612.2	chr18	+	4789	4	NNC	ENSMUSG00000069378.15	novel	2631	7	NA	NA	263	31711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTATCTCTAGTTGCCC	NA	False	NA	NA	False	AATAAA	-12	NA	53596917	53629531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53597121_53597624_53598235_53606492_53606801_53625863
ES.16612.3	chr18	+	3010	7	FSM	ENSMUSG00000069378.15	ENSMUST00000091900.11	2631	7	-332	-47	-332	-3	multi-exon	FALSE	canonical	0	0	junction_2	0.897527467855751	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAAGGTGTTAGGCCTCGA	NA	False	NA	NA	False	AATAAA	-22	NA	53597255	53708976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53598235_53606492_53606801_53669683_53669812_53673269_53673395_53685118_53685462_53701227_53701405_53708026
ES.16613.1	chr18	-	1859	1	Intergenic	novelGene_13858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-45	NA	53804626	53802767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_53802800_53804600
ES.16614.1	chr18	-	4746	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-192	0	-131	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877811	53814794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.12	chr18	-	4644	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.7498954703071	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	False	NA	-2	True	AATAAA	-23	NA	53877668	53814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830624_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.13	chr18	-	5742	20	ISM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-1050	2	-989	-2	intron_retention	FALSE	canonical	1	72	junction_13	47.6573062243881	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	53878669	53814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353
ES.16614.14	chr18	-	4571	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-57	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	72.40257567234	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	53877737	53814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.15	chr18	-	4594	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.4459760938291	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	53877655	53814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836323_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.16	chr18	-	5581	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	71.2789590271912	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGGTCGGTCTCT	NA	False	NA	-3	True	AATAAA	-22	NA	53877654	53814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53874275_53877353_53877420_53877559
ES.16614.2	chr18	-	4487	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_14	71.811194429764	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877750	53814794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.20	chr18	-	4453	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	72.3358204082004	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGGTCGGTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	53877614	53814797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.21	chr18	-	4404	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.1664137410259	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGGTCGGTCTC	NA	False	NA	-4	True	AATAAA	-21	NA	53877622	53814797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.22	chr18	-	4692	20	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-70	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.8488260498562	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTGTGTGGTCGGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	53877750	53814798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53854694_53854873_53856154_53856539_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.24	chr18	-	7692	19	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	219	junction_9	23.5537211025727	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTGTGTGGTCGGTCT	NA	False	NA	-5	True	AATAAA	-20	NA	53877638	53814798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.25	chr18	-	4128	18	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	22	-7	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	105.069230760462	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGAGTTGTGTGGTCGG	NA	False	NA	-8	True	AATAAA	-17	NA	53877590	53814801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53836193_53836317_53839891_53840054_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.26	chr18	-	4484	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	60.8760215520036	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGAGTTGTGTGGTCGG	NA	False	NA	-8	True	AATAAA	-17	NA	53877630	53814801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856300_53857421_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.27	chr18	-	4501	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.3039094299885	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGAGTTGTGTGGTCG	NA	False	NA	-9	True	AATAAA	-16	NA	53877632	53814802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851576_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.29	chr18	-	5165	22	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.6182240917129	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGAGTTGTGTGGTCG	NA	False	NA	-9	True	AATAAA	-16	NA	53877662	53814802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53844508_53844924_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856539_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.30	chr18	-	3625	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	-49	978	12	-978	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGCTGACAAATTAGTC	NA	False	NA	NA	False	AATAAA	-30	NA	53877668	53815772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.34	chr18	-	2137	13	ISM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	21411	1133	21404	-1133	3prime_fragment	FALSE	canonical	3	219	junction_10	25.5183757320093	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGTGTAGATATCTT	5782	False	NA	NA	False	TTTAAA	-18	NA	53856208	53815927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154
ES.16614.35	chr18	-	3309	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-3	-1155	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	72.3358204082004	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACACGCTGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	53877622	53815949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.36	chr18	-	3027	20	NNC	ENSMUSG00000048799.9	novel	3801	15	NA	NA	-70	-8054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.8553872434091	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTGTTTGTGCAACT	NA	False	NA	NA	False	AATAAA	-28	NA	53877750	53826620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53826851_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.37	chr18	-	5748	20	NNC	ENSMUSG00000048799.9	novel	3801	15	NA	NA	-2	-8080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.8553872434091	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGTGTCTCTCTGCTT	NA	False	NA	NA	False	AATAAA	-2	NA	53877614	53826646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53829734_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.38	chr18	-	2923	19	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	50	11854	5	11253	5prime_fragment	FALSE	canonical	1	72	junction_11	47.1807988251341	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGCTTCCGTCCTTTGG	NA	False	NA	NA	False	TATAAA	-1	NA	53877630	53830420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.39	chr18	-	3960	18	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	19	16276	19	6831	5prime_fragment	FALSE	canonical	1	72	junction_10	48.351796179373	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGGGCATTGTCTACA	NA	False	NA	NA	False	AATAAA	-23	NA	53877661	53834842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.4	chr18	-	4767	22	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	86.0540093023376	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877750	53814794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53875249_53875332_53877353_53877420_53877559
ES.16614.40	chr18	-	1285	8	ISM	ENSMUSG00000048799.9	ENSMUST00000237145.2	3801	15	5	15593	5	-15593	5prime_fragment	FALSE	canonical	3	229	junction_7	17.7096768197848	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACTCTGCTTTGCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	53877630	53857266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16614.41	chr18	-	3014	1	NIC	ENSMUSG00000048799.9	novel	3261	20	NA	NA	7	2339	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTAACCAGCGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	53877673	53874659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53874700_53877700
ES.16614.42	chr18	-	2959	2	FSM	ENSMUSG00000048799.9	ENSMUST00000235928.2	474	2	-147	-2338	-79	2338	multi-exon	FALSE	canonical	3	229	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTAACCAGCGCAGAG	NA	False	NA	NA	False	NA	NA	NA	53877759	53874660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_53877420_53877559
ES.16614.8	chr18	-	9358	18	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	20	-1	intron_retention	FALSE	canonical	3	219	junction_10	23.7572789792575	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	False	NA	-2	True	AATAAA	-23	NA	53877660	53814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53854873_53856154_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53873281_53877353_53877420_53877559
ES.16614.9	chr18	-	4416	21	NNC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	60.8760215520036	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	False	NA	-2	True	AATAAA	-23	NA	53877623	53814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856237_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ES.16615.1	chr18	+	164	1	Intergenic	novelGene_13859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	53916731	53916895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_53916700_53916900
ES.16616.1	chr18	+	178	1	Intergenic	novelGene_13860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAGATAAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	53956901	53957079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_53956900_53957100
ES.16617.1	chr18	-	193	1	Intergenic	novelGene_13861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCACAAACACACACT	NA	False	NA	NA	False	NA	NA	NA	53987516	53987323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_53987300_53987500
ES.16618.10	chr18	+	4273	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	9424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	61.7751298393348	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAAACAGATAGAATC	NA	False	NA	NA	False	NA	NA	NA	53995170	54098044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316_54088634_54098029
ES.16618.12	chr18	+	5476	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	12	intron_retention	FALSE	canonical	0	0	junction_1	79.6516174681297	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTTTTTTTAAACTCGC	NA	False	NA	NA	False	TTTAAA	-40	NA	53995170	54088632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54008525_54008632_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54066618_54081119_54081227_54086316
ES.16618.13	chr18	+	2581	14	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	288	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	80.3450399451452	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGTGGCATCTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	53995170	54086833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
ES.16618.14	chr18	+	4431	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.2795248191836	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCCCCTTTCCTCTAA	NA	False	NA	NA	False	TTTAAA	-5	NA	53995170	54088651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54029362_54029515_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.15	chr18	+	10457	10	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	12	intron_retention	FALSE	non_canonical	0	0	junction_9	67.0314096267057	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTTTTTTTAAACTCGC	NA	False	NA	NA	False	TTTAAA	-40	NA	53995170	54088632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54066612_54081113
ES.16618.16	chr18	+	4395	14	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-23	30	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	79.7783912847102	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	53995170	54088650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
ES.16618.18	chr18	+	5339	1	Genic_Genomic	ENSMUSG00000073563.4	novel	NA	NA	NA	NA	-23	-81234	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACCAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	53995170	54000509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_53995200_54000500
ES.16618.19	chr18	+	4319	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	51	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	65.9298343358722	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAGTGAACTAATGTTT	NA	False	NA	NA	False	TTTAAA	-25	NA	53995171	54088671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ES.16618.20	chr18	+	7698	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-22	27	intron_retention	FALSE	canonical	3	27	junction_10	74.52963616352	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTCTTTCCCCTTTCCT	NA	False	NA	NA	False	TTTAAA	-1	NA	53995171	54088647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54070021_54081119_54081227_54081716_54081741_54086316
ES.16618.24	chr18	+	3474	13	FSM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	-22	797	-22	-797	multi-exon	FALSE	canonical	3	32	junction_11	67.2040838706167	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTACTTCCTTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	53995171	54087823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ES.16618.26	chr18	+	3444	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-15	-796	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTACTTCCTTATTG	NA	False	NA	NA	False	ATTAAA	-15	NA	53995178	54087824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.28	chr18	+	2308	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-2	156	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAATTGTACCTAATTTG	NA	False	NA	NA	False	AATACA	-15	NA	53995191	54086701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.29	chr18	+	2182	13	FSM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	-52	50	14	-50	multi-exon	FALSE	canonical	3	18	junction_10	71.3267130884355	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTCATTTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	53995207	54086495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ES.16618.3	chr18	+	2293	14	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	-67	-41	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	79.7783912847102	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGATTGTCTTACAT	NA	False	NA	NA	False	NA	NA	NA	53995126	54086504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54081716_54081741_54086316
ES.16618.30	chr18	+	2046	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	88	29	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	65.9298343358722	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGAGTGCTTTGCCC	NA	False	NA	NA	False	NA	NA	NA	53995347	54086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ES.16618.31	chr18	+	2582	13	FSM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	172	1495	106	580	multi-exon	FALSE	canonical	3	32	junction_11	67.2040838706167	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAGTCCTGGAGAA	NA	False	NA	NA	False	AATATA	-12	NA	53995365	54087125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ES.16618.33	chr18	+	4113	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	122	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.5243681215512	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	53995381	54088644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54019389_54019442_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.34	chr18	+	1324	2	ISM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	131	56901	131	-52099	5prime_fragment	FALSE	canonical	3	212	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTATCTTATCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	53995390	54029644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_53995673_54028602
ES.16618.35	chr18	+	2274	13	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	190	287	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTGTGGCATCTGC	NA	False	NA	NA	False	ATTAAA	-20	NA	53995449	54086832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ES.16618.36	chr18	+	3871	10	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	198	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.8953362155971	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	53995457	54088644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.37	chr18	+	6033	1	Intergenic	novelGene_13862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	54042945	54048978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_54042900_54049000
ES.16618.39	chr18	+	4419	6	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-3746	24	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_2	41.5865362827923	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGCTCTTTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	54061569	54088644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.4	chr18	+	2156	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-52	-46	combination_of_known_junctions	TRUE	canonical	3	96	junction_8	36.435156938828	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTTTGTGATTGTCT	NA	False	NA	NA	False	NA	NA	NA	53995141	54086499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.40	chr18	+	1039	6	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-2177	288	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_2	41.5865362827923	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGTGGCATCTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	54063138	54086833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.41	chr18	+	2562	4	ISM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	71327	-30	1205	30	3prime_fragment	FALSE	canonical	3	32	junction_2	81.8141525382715	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	54066520	54088650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_54066618_54081119_54081227_54081716_54081741_54086316
ES.16618.42	chr18	+	3224	3	ISM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	73978	-2105	3922	30	3prime_fragment	FALSE	canonical	3	27	junction_1	92.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCCCCTTTCCTCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	54069237	54088650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_54070021_54081119_54081227_54086316
ES.16618.5	chr18	+	1090	2	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-49	-78751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCGCCGTGGCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	53995144	54002992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54002430
ES.16618.6	chr18	+	4671	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-43	403	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATTTGCACCAGTAA	NA	False	NA	NA	False	AATAAA	-22	NA	53995150	54089023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.7	chr18	+	4296	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-43	31	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCCCCTTTCCTCTAA	NA	False	NA	NA	False	TTTAAA	-5	NA	53995150	54088651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
ES.16618.8	chr18	+	4382	13	NNC	ENSMUSG00000073563.4	novel	2180	13	NA	NA	-36	28	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTCTTTCCCCTTTCCTC	NA	False	NA	NA	False	TTTAAA	-2	NA	53995157	54088648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ES.16618.9	chr18	+	2464	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	-29	288	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGTGGCATCTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	53995164	54086833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
ES.16619.1	chr18	-	171	1	Intergenic	novelGene_13863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGGAAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	54104310	54104139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_54104100_54104300
ES.1662.1	chr1	+	179	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAACAACCAA	NA	False	NA	NA	False	NA	NA	NA	156110614	156110793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156110600_156110800
ES.16620.1	chr18	+	176	1	Intergenic	novelGene_13864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATCAAATTAA	NA	False	NA	NA	False	NA	NA	NA	54494708	54494884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_54494700_54494900
ES.16621.1	chr18	+	179	1	Intergenic	novelGene_13865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	54941823	54942002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_54941800_54942000
ES.16622.1	chr18	+	159	1	Intergenic	novelGene_13866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAATAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55271943	55272102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_55271900_55272100
ES.16623.1	chr18	+	177	1	Intergenic	novelGene_13867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	55888767	55888944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_55888800_55888900
ES.16624.1	chr18	-	148	1	Intergenic	novelGene_13868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGCCAGCATGA	NA	False	NA	NA	False	NA	NA	NA	56193905	56193757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56193800_56193900
ES.16625.1	chr18	-	177	1	Intergenic	novelGene_13869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9921	False	NA	NA	False	NA	NA	NA	56459080	56458903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56458900_56459100
ES.16626.1	chr18	+	145	1	Intergenic	novelGene_13870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACACCTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	56546566	56546711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56546600_56546700
ES.16627.1	chr18	+	1649	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	5	951	5	0	multi-exon	FALSE	canonical	1	2	junction_2	2.64910390118809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTGCCTGAAGATAAC	2616	False	NA	NA	False	AATAAA	-19	NA	56565208	56635913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
ES.16627.2	chr18	+	2592	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	10	3	10	-3	multi-exon	FALSE	canonical	1	2	junction_2	2.64910390118809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGCTGTTTCCTGCA	2621	False	NA	NA	False	AATAAA	-23	NA	56565213	56636861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
ES.16628.1	chr18	+	165	1	Intergenic	novelGene_13871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56649731	56649896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56649700_56649900
ES.16629.1	chr18	+	170	1	Intergenic	novelGene_13872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	849	False	NA	NA	False	NA	NA	NA	56679504	56679674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56679500_56679700
ES.1663.1	chr1	-	4215	17	ISM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	-295	-2	21	0	intron_retention	TRUE	canonical	2	8	junction_15	2.95803989154981	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	GATAAA	-19	NA	156131213	156082865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936
ES.1663.11	chr1	-	3426	18	FSM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	-315	99	1	-99	multi-exon	FALSE	canonical	2	2	junction_17	3.94424814452711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTATATGTTTTTTT	NA	False	NA	NA	False	AATGAA	-14	NA	156131233	156082966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936_156130173_156130880
ES.1663.12	chr1	-	3637	18	FSM	ENSMUSG00000060985.16	ENSMUST00000121146.10	3759	18	20	102	20	-100	multi-exon	FALSE	canonical	2	2	junction_17	4.02242846994794	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTATATGTTTTTT	NA	False	NA	NA	False	AATGAA	-13	NA	156131214	156082967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129936_156130173_156130880
ES.1663.13	chr1	-	4161	18	NNC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	-28	-102	intron_retention	FALSE	canonical	0	0	junction_7	5.61633800577883	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTGTGTATATGTTTT	NA	False	NA	NA	False	AATGAA	-11	NA	156130946	156082969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156103673_156103763_156104131_156104199_156104867_156105081_156111834_156112053_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129936
ES.1663.14	chr1	-	1988	9	ISM	ENSMUSG00000060985.16	ENSMUST00000121146.10	3759	18	74	28809	16	10363	5prime_fragment	FALSE	canonical	2	2	junction_8	4.58087055045217	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAGGTATGATAAATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	156131160	156111674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129936_156130173_156130880
ES.1663.2	chr1	-	3752	18	FSM	ENSMUSG00000060985.16	ENSMUST00000121146.10	3759	18	7	0	7	0	multi-exon	FALSE	canonical	2	2	junction_17	4.02242846994794	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	GATAAA	-19	NA	156131227	156082865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129936_156130173_156130880
ES.1663.3	chr1	-	3295	17	NNC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.41987879558485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	GATAAA	-19	NA	156131217	156082865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112049_156112951_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129314_156129477_156129936_156130173_156130880
ES.1663.4	chr1	-	3511	18	FSM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	-299	-2	17	0	multi-exon	FALSE	canonical	2	2	junction_17	3.94424814452711	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGATCTATATTTA	NA	False	NA	NA	False	GATAAA	-19	NA	156131217	156082865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936_156130173_156130880
ES.1663.5	chr1	-	3189	18	NNC	ENSMUSG00000060985.16	novel	3210	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	4.67637809749454	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTGTGATCTATAT	NA	False	NA	NA	False	GATAAA	-16	NA	156130941	156082868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129979_156130173_156130880
ES.1663.6	chr1	-	3407	18	NIC	ENSMUSG00000060985.16	novel	3210	18	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	4.86211254582866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTGTGATCTATA	NA	False	NA	NA	False	GATAAA	-15	NA	156131171	156082869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129314_156129477_156129936_156130173_156130880
ES.1663.7	chr1	-	3684	18	NIC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	4.86211254582866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTGTGATCTATA	NA	False	NA	NA	False	GATAAA	-15	NA	156131217	156082869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129083_156129477_156129936_156130173_156130880
ES.1663.8	chr1	-	3686	18	NNC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	4.73081629714896	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAATTGTTTGTGAT	NA	False	NA	NA	False	GATAAA	-10	NA	156131213	156082874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129083_156129477_156129979_156130173_156130880
ES.16630.1	chr18	+	4546	1	Antisense	novelGene_ENSMUSG00000053644.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCCTGCAGACTGATC	9225	False	NA	NA	False	NA	NA	NA	56687880	56692426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_56687900_56692400
ES.16631.1	chr18	-	3897	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	34	-2017	34	-5	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGTTGTCTTTTTTCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	56695347	56657798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.10	chr18	-	1871	18	NNC	ENSMUSG00000053644.14	novel	1914	18	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	101.062144710201	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	NA	False	NA	-9	True	ATTAAA	-26	NA	56695351	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684240_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.11	chr18	-	7875	18	NNC	ENSMUSG00000053644.14	novel	1789	18	NA	NA	-41	0	intron_retention	FALSE	non_canonical	0	0	junction_9	134.268362169145	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGATAGGTTTGGTGA	NA	False	NA	-11	True	ATTAAA	-24	NA	56695339	56659821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56673954_56674013_56675027_56675081_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.12	chr18	-	6937	6	NNC	ENSMUSG00000053644.14	novel	1789	18	NA	NA	-3636	0	intron_retention	TRUE	canonical	0	0	junction_5	175.197488566475	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGATAGGTTTGGTGA	3494	False	NA	-11	True	ATTAAA	-24	NA	56674325	56659821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664881_56665052_56667347_56670275_56673954_56674013
ES.16631.13	chr18	-	1811	18	NNC	ENSMUSG00000053644.14	novel	1914	18	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	100.732919680045	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGCAAAAGATAGGTTT	NA	False	NA	-16	True	ATTAAA	-19	NA	56695328	56659826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681613_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.14	chr18	-	7375	2	Genic_Genomic	ENSMUSG00000053644.14	novel	4131	20	NA	NA	41	-14964	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCACGTTTAGGGAGCG	2895	False	NA	NA	False	NA	NA	NA	56705982	56698402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_56698751_56698955
ES.16631.2	chr18	-	2251	18	NNC	ENSMUSG00000053644.14	novel	1914	18	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.137099042677	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	-5	True	ATTAAA	-30	NA	56695315	56659815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56666858_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.3	chr18	-	5555	15	NNC	ENSMUSG00000053644.14	novel	1914	18	NA	NA	8182	0	intron_retention	FALSE	non_canonical	0	0	junction_8	170.537879567406	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	-5	True	ATTAAA	-30	NA	56684312	56659815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56671218_56671293_56671815_56675296_56678115_56679975_56680021_56680193_56680264_56681518_56681652_56683367_56683492_56684231
ES.16631.5	chr18	-	2142	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	-37	2026	-37	2	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	2817	False	NA	-9	True	ATTAAA	-26	NA	56706060	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
ES.16631.6	chr18	-	2779	2	ISM	ENSMUSG00000053644.14	ENSMUST00000174704.8	1789	18	31423	-2	-3946	2	3prime_fragment	FALSE	canonical	3	479	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	NA	False	NA	-9	True	ATTAAA	-26	NA	56663867	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_56660080_56661348
ES.16631.7	chr18	-	5140	16	NNC	ENSMUSG00000053644.14	novel	1914	18	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_6	106.739475151209	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	NA	False	NA	-9	True	ATTAAA	-26	NA	56695297	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56667347_56670275_56671218_56671290_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ES.16631.8	chr18	-	3192	20	NNC	ENSMUSG00000053644.14	novel	4131	20	NA	NA	67	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.326696364102	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	2921	False	NA	-9	True	ATTAAA	-26	NA	56705956	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56661234_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
ES.16631.9	chr18	-	6792	17	NNC	ENSMUSG00000053644.14	novel	4131	20	NA	NA	-349	2	intron_retention	TRUE	non_canonical	0	0	junction_7	152.337708213528	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAGGTTTGGTGAGT	NA	False	NA	-9	True	ATTAAA	-26	NA	56695749	56659819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_56660080_56661348_56661425_56664561_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56671210_56674035_56675027_56675081_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554
ES.16632.1	chr18	+	1550	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	184	208	184	-208	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTCAGCTGTTACA	NA	False	NA	NA	False	ATTAAA	-18	NA	56706077	56720576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ES.16632.2	chr18	+	1241	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	190	511	190	12	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGAGGTTGCTTTACTG	NA	False	NA	27	True	AATAAA	-28	NA	56706083	56720273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ES.16632.3	chr18	+	3874	4	ISM	ENSMUSG00000008301.12	ENSMUST00000130163.8	1386	5	10569	-319	190	-204	3prime_fragment	FALSE	canonical	3	396	junction_3	27.6325090347503	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGCTGTTACATTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	56706083	56720580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
ES.16632.4	chr18	+	1343	2	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	223	10999	223	-3587	5prime_fragment	FALSE	canonical	3	376	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGACAGACAGACAGAAA	NA	False	NA	NA	False	NA	NA	NA	56706116	56709785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_56706208_56708533
ES.16633.1	chr18	-	179	1	Intergenic	novelGene_13873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	56714930	56714751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56714800_56714900
ES.16634.1	chr18	-	182	1	Intergenic	novelGene_13874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAC	NA	False	NA	NA	False	NA	NA	NA	56715574	56715392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56715400_56715600
ES.16635.1	chr18	-	120	1	Intergenic	novelGene_13875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56749880	56749760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56749800_56749900
ES.16636.1	chr18	+	141	1	Intergenic	novelGene_13876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTGGGCAAT	NA	False	NA	NA	False	NA	NA	NA	56764059	56764200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56764100_56764200
ES.16637.1	chr18	+	205	1	Intergenic	novelGene_13877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTGTGGGAGAATAA	NA	False	NA	NA	False	NA	NA	NA	56777316	56777521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56777300_56777500
ES.16638.1	chr18	-	178	1	Intergenic	novelGene_13878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTAG	9464	False	NA	NA	False	NA	NA	NA	56779821	56779643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56779600_56779800
ES.16639.1	chr18	-	201	1	Intergenic	novelGene_13879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTTTTTTTTTAAG	3135	False	NA	-2	True	NA	NA	NA	56788359	56788158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56788200_56788400
ES.1664.1	chr1	+	167	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	156163839	156164006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156163800_156164000
ES.16640.1	chr18	-	278	1	Intergenic	novelGene_13880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAGGGAGGATATGGA	NA	False	NA	0	True	NA	NA	NA	56795333	56795055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56795100_56795300
ES.16640.2	chr18	-	176	1	Intergenic	novelGene_13881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	-101	True	NA	NA	NA	56795332	56795156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56795200_56795300
ES.16641.1	chr18	-	174	1	Intergenic	novelGene_13882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGAGCAAGCAGGAGC	NA	False	NA	NA	False	NA	NA	NA	56797395	56797221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56797200_56797400
ES.16642.1	chr18	+	269	1	Intergenic	novelGene_13883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATTTATTTATTAGA	NA	False	NA	NA	False	AATATA	-8	NA	56807517	56807786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_56807500_56807800
ES.16643.1	chr18	+	3226	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-383	0	-383	0	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840501	56886496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.10	chr18	+	5126	10	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-53	-2	intron_retention	FALSE	canonical	3	25	junction_3	417.638008534711	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840831	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862646_56864041_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.11	chr18	+	2663	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-53	233	-53	-233	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGCAATATTAATCTA	NA	False	NA	NA	False	AATAGA	-21	NA	56840831	56886263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.13	chr18	+	6334	9	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-51	-2	intron_retention	FALSE	canonical	3	1085	junction_1	102.39598380796	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840833	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873985_56876282_56876388_56881048_56881169_56882770
ES.16643.15	chr18	+	3044	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	397.213242478143	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840844	56886496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862646_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.16	chr18	+	4359	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-40	-595	intron_retention	FALSE	canonical	3	1085	junction_1	124.704193203232	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACGTTGTAAGATGTGAA	NA	False	NA	13	True	AAGAAA	-10	NA	56840844	56885901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.18	chr18	+	3485	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1085	junction_1	121.692792730174	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840885	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.19	chr18	+	2541	9	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	450.330434236906	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840889	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56872890_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.2	chr18	+	3137	9	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-325	-588	intron_retention	FALSE	canonical	0	0	junction_8	423.810983812359	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGATGTGAATTATTGA	NA	False	NA	20	True	AAGAAA	-17	NA	56840559	56885908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873985_56876282_56876388_56881048_56881192_56885678
ES.16643.21	chr18	+	5010	10	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	36	594	36	-594	intron_retention	FALSE	canonical	3	1085	junction_1	98.7594658691785	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTAAGATGTGAAT	NA	False	NA	14	True	AAGAAA	-11	NA	56840920	56885902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770
ES.16643.22	chr18	+	2738	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	398.471529723266	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840930	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882827_56882882_56885678
ES.16643.23	chr18	+	2846	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	48	-594	intron_retention	FALSE	canonical	3	1085	junction_1	121.692792730174	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTTGTAAGATGTGAAT	NA	False	NA	14	True	AAGAAA	-11	NA	56840932	56885902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.24	chr18	+	2777	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	49	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	394.800658560748	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTACTGTTCTTTTTAA	NA	False	NA	17	True	AATAAA	-16	NA	56840933	56886493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876392_56881066_56881169_56882770_56882882_56885678
ES.16643.26	chr18	+	2029	3	ISM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	73	22855	73	-2887	5prime_fragment	FALSE	canonical	3	1085	junction_1	111	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAATTTTACTGTATCTA	NA	False	NA	NA	False	NA	NA	NA	56840957	56863641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_56841547_56861472_56861630_56862358
ES.16643.27	chr18	+	2196	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	80	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	388.823468941884	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTACTGTTCTTTTTAA	NA	False	NA	17	True	AATAAA	-16	NA	56840964	56886493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56886242
ES.16643.3	chr18	+	3031	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-295	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	412.601173526036	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840589	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56881048_56881169_56882770_56882882_56885678
ES.16643.30	chr18	+	2003	10	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	575	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.670190536184	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTACTGTTCTTTTTA	NA	False	NA	16	True	AATAAA	-15	NA	56841459	56886492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56873798_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.31	chr18	+	2247	11	NNC	ENSMUSG00000024590.9	novel	659	4	NA	NA	677	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.534397542514	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56841561	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841630_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.32	chr18	+	2207	11	NNC	ENSMUSG00000024590.9	novel	659	4	NA	NA	988	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.534397542514	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTACTGTTCTTTTTAA	NA	False	NA	17	True	AATAAA	-16	NA	56841872	56886493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841902_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.33	chr18	+	1793	7	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	2527	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	498.009175506726	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56864039	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56881048_56881169_56882770_56882882_56885678
ES.16643.35	chr18	+	3517	6	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	9883	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	563.157526807553	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56871395	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56871404_56871627_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.4	chr18	+	2606	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	-274	511	-274	-511	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTATGTGTGTATG	NA	False	NA	97	True	NA	NA	NA	56840610	56885985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16643.6	chr18	+	2989	13	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-77	23839	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	489.985969186874	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAGCAAAATTCCAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	56840807	56910335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678_56886497_56900659_56900706_56910312
ES.16643.7	chr18	+	2856	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	399.963698352738	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACTGTTCTTTTTAAC	NA	False	NA	18	True	AATAAA	-17	NA	56840824	56886494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864168_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ES.16644.1	chr18	-	2044	3	Antisense	novelGene_ENSMUSG00000024590.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTTTTGGTCATG	4912	False	NA	NA	False	NA	NA	NA	56841438	56820196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_56821892_56830895_56830971_56841164
ES.16644.2	chr18	-	2786	2	Antisense	novelGene_ENSMUSG00000024590.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTCCCTCACCTCCAG	4276	False	NA	NA	False	AATAAA	-10	NA	56842074	56839116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_56839472_56839643
ES.16645.1	chr18	-	211	2	Antisense	novelGene_ENSMUSG00000024590.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATATCTGGGAGT	NA	False	NA	NA	False	NA	NA	NA	56871627	56843537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_56843562_56871440
ES.16645.2	chr18	-	155	1	Intergenic	novelGene_13884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9662	False	NA	NA	False	NA	NA	NA	56843749	56843594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56843600_56843700
ES.16645.3	chr18	-	1921	1	Antisense	novelGene_ENSMUSG00000024590.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTAAAAAGGAA	3961	False	NA	NA	False	NA	NA	NA	56863639	56861718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_56861700_56863600
ES.16645.4	chr18	-	5280	1	Intergenic	novelGene_13885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGAAAGCACTATATAAA	NA	False	NA	NA	False	NA	NA	NA	56872085	56866805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56866800_56872100
ES.16645.5	chr18	-	5732	1	Antisense	novelGene_ENSMUSG00000024590.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCCTAATAAAATGGCAT	NA	False	NA	NA	False	NA	NA	NA	56873359	56867627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_56867600_56873400
ES.16645.6	chr18	-	157	1	Intergenic	novelGene_13886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56871627	56871470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56871500_56871600
ES.16646.1	chr18	-	174	1	Intergenic	novelGene_13887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAGAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	56874555	56874381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56874400_56874600
ES.16647.1	chr18	-	349	1	Intergenic	novelGene_13888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTACTGATGCAATAC	NA	False	NA	NA	False	AATAAA	-20	NA	56908575	56908226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56908200_56908600
ES.16648.1	chr18	-	456	1	Intergenic	novelGene_13889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6483	False	NA	NA	False	NA	NA	NA	56914807	56914351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_56914400_56914800
ES.16649.1	chr18	-	2763	6	NNC	ENSMUSG00000024592.16	novel	726	6	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	41.4420076733741	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGGTAGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	57108435	57088899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_57091260_57091594_57091652_57095472_57095591_57100164_57100262_57106455_57106557_57108405
ES.16649.10	chr18	-	1183	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	-25	1242	-25	539	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATATTTTGTCAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	57108465	57090146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ES.16649.11	chr18	-	930	3	NNC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	4	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAACATGTGTTTTTGTA	NA	False	NA	NA	False	TATAAA	-3	NA	57108422	57090169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_57090982_57106455_57106557_57108405
ES.16649.13	chr18	-	1200	6	NNC	ENSMUSG00000024592.16	novel	726	6	NA	NA	15	516	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	44.1017006474807	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAACATGTGTTTTTGTA	NA	False	NA	NA	False	TATAAA	-3	NA	57108411	57090169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_57090994_57091189_57091260_57091594_57091652_57095472_57095591_57106455_57106557_57108381
ES.16649.14	chr18	-	1025	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	14	1361	0	420	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATAGTAACTTTGTCAA	NA	False	NA	NA	False	AATGAA	-4	NA	57108426	57090265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ES.16649.2	chr18	-	2406	5	NIC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	31.2329953734828	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108422	57088904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108381
ES.16649.3	chr18	-	2409	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	-9	0	-9	0	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108449	57088904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ES.16649.4	chr18	-	2651	5	NNC	ENSMUSG00000024592.16	novel	726	6	NA	NA	9	-16	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	43.4187459514897	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATGCCACCAAAA	NA	False	NA	NA	False	NA	NA	NA	57108417	57088920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_57091260_57091594_57091652_57095472_57095591_57106455_57106557_57108381
ES.16649.6	chr18	-	5532	3	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	9499	83	9377	-83	3prime_fragment	FALSE	canonical	3	83	junction_1	9.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTATGGCATTGG	NA	False	NA	NA	False	NA	NA	NA	57098941	57088987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_57090994_57091594_57091652_57095472
ES.16649.7	chr18	-	2023	4	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	1882	344	1760	-344	3prime_fragment	FALSE	canonical	3	83	junction_1	12.0277457017791	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTACAAGGTGGTCAAACT	NA	False	NA	NA	False	NA	NA	NA	57106558	57089248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455
ES.16649.8	chr18	-	4367	3	NNC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	13734	596	intron_retention	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTTTGCTTAAATC	NA	False	NA	NA	False	AATGAA	-18	NA	57094584	57090089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_57093520_57093579_57094398_57094465
ES.16649.9	chr18	-	1056	3	NIC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	-22	590	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	34.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACTGTCTTTTTTGCT	NA	False	NA	NA	False	AATGAA	-12	NA	57108462	57090095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_57090994_57106455_57106557_57108405
ES.1665.1	chr1	+	504	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	-1	-58	-1	58	mono-exon	FALSE	NA	NA	NA	NA	NA	1028	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACAGTGGGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	156193608	156194112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_156193600_156194100
ES.1665.2	chr1	+	339	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	156193609	156194086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156193864_156194001
ES.1665.3	chr1	+	222	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	156193609	156194054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156193691_156193913
ES.1665.4	chr1	+	330	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	0	32	multi-exon	FALSE	canonical	0	0	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	156193609	156194086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156193723_156193869
ES.1665.5	chr1	+	205	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	15	-6	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTGGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	156193624	156194048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156193657_156193875
ES.1665.6	chr1	+	337	2	Genic_Genomic	ENSMUSG00000078193.3	novel	445	1	NA	NA	26	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	156193635	156194054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156193788_156193869
ES.16650.1	chr18	-	179	1	Intergenic	novelGene_13890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAATAGA	NA	False	NA	NA	False	NA	NA	NA	57272572	57272393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_57272400_57272600
ES.16651.1	chr18	+	1693	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	-18	3355	-18	366	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	57487794	57522673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.10	chr18	+	4792	9	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	2	-209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	277.065312697205	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487814	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507739_57514699_57514804_57517245_57517349_57522291
ES.16651.11	chr18	+	9966	8	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	4	3	-1	0	intron_retention	FALSE	canonical	3	500	junction_4	180.426026449645	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	False	NA	9	True	AATAAA	-19	NA	57487816	57526025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245
ES.16651.12	chr18	+	4423	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	4	603	-1	-600	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCACAGAGTTGCTTGAC	NA	False	NA	NA	False	AATAAA	-24	NA	57487816	57525425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.13	chr18	+	5218	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	303.40210860535	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGTGTGCAATGATTT	NA	False	NA	7	True	AATAAA	-17	NA	57487816	57526023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ES.16651.14	chr18	+	3200	7	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	4	9211	-1	-457	5prime_fragment	FALSE	canonical	3	500	junction_4	145.055927911348	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57487816	57516817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699
ES.16651.15	chr18	+	1173	1	FSM	ENSMUSG00000024594.10	ENSMUST00000237031.2	1147	1	0	-26	0	26	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATCAACTGTTGCATC	NA	False	NA	NA	False	NA	NA	NA	57487817	57488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487800_57489000
ES.16651.16	chr18	+	4880	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	0	-209	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	339.521158816281	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487817	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495330_57495398_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.17	chr18	+	5010	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	0	-209	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	303.40210860535	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487817	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ES.16651.18	chr18	+	6908	5	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	6	15495	1	-6741	intron_retention	FALSE	canonical	3	500	junction_4	27.8747197295327	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57487818	57510533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438
ES.16651.19	chr18	+	1736	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	1	366	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	339.521158816281	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	57487818	57522673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495330_57495398_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.2	chr18	+	5048	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	-18	0	-18	0	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487794	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.20	chr18	+	5084	9	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	327.977490652941	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487818	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57488023_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517350_57522291
ES.16651.21	chr18	+	4289	9	NIC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	3	374	combination_of_known_junctions	FALSE	canonical	3	294	junction_5	231.702799939923	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57487820	57522681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.22	chr18	+	3587	10	Fusion	ENSMUSG00000024594.10_ENSMUSG00000117864.2	novel	5030	9	NA	NA	4	-8683	multi-exon	FALSE	canonical	0	0	junction_8	309.080995417698	534	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGATAAGGAGTCTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	57487821	57540539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57531037_57531146_57538344
ES.16651.23	chr18	+	1789	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	11	3230	6	491	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGATGATTTGCTCTTG	NA	False	NA	NA	False	TATAAA	-20	NA	57487823	57522798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.24	chr18	+	7864	8	NIC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	6	-209	intron_retention	FALSE	canonical	3	500	junction_4	202.155829972417	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487823	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.25	chr18	+	4335	5	NIC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	9	-6775	intron_retention	FALSE	canonical	3	500	junction_3	8.69985632065266	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57487826	57510499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57487964_57495504_57496538_57498260_57498422_57504438_57504542_57507598
ES.16651.26	chr18	+	4689	9	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	12	-234	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	296.133310351943	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-38	NA	57487829	57525791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496451_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.27	chr18	+	1669	9	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	12	361	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_8	269.383091525805	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCAAAAGAAATAGATCC	NA	False	NA	NA	False	AATAAA	-20	NA	57487829	57522668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522275
ES.16651.28	chr18	+	1718	9	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	17	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.293141887581	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTCTTTTTACTGTCA	NA	False	NA	NA	False	AATAAA	-34	NA	57487834	57522682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57488023_57495504_57495619_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.29	chr18	+	1697	10	NIC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	18	366	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	340.764173912432	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	57487835	57522673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57487964_57488667_57488713_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.3	chr18	+	4836	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	-18	212	-18	-209	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57487794	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.31	chr18	+	201	1	Intergenic	novelGene_13891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTAACTGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	57493003	57493204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_57493000_57493200
ES.16651.32	chr18	+	9167	6	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	8661	212	8512	-209	intron_retention	FALSE	canonical	3	500	junction_2	199.842538014308	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57496473	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245
ES.16651.33	chr18	+	4323	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-79	-3721	-79	0	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506884	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.34	chr18	+	970	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-53	-394	-53	394	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTCATACGTCCTGGT	NA	False	NA	NA	False	AGTAAA	-31	NA	57506910	57522701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.35	chr18	+	4351	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506912	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.36	chr18	+	4135	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-47	-209	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57506916	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.37	chr18	+	4075	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-43	-3509	-43	-209	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57506920	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.38	chr18	+	3672	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-30	-3119	-30	-599	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACAGAGTTGCTTGACT	NA	False	NA	NA	False	AATAAA	-25	NA	57506933	57525426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.39	chr18	+	4091	5	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	-234	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	399.807688145188	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-38	NA	57506951	57525791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522275
ES.16651.4	chr18	+	5070	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	340.053953598579	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487802	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495367_57495398_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.40	chr18	+	1092	6	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	360	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	427.566883656815	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGCAAAAGAAATAGATC	NA	False	NA	NA	False	AATAAA	-19	NA	57506951	57522667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ES.16651.41	chr18	+	3710	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	-599	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACAGAGTTGCTTGACT	NA	False	NA	NA	False	AATAAA	-25	NA	57506951	57525426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.42	chr18	+	5852	4	ISM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	-12	-374	-12	374	intron_retention	FALSE	canonical	3	123	junction_1	376.308384174469	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57506951	57522681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245
ES.16651.43	chr18	+	4241	6	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	-209	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	427.566883656815	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57506951	57525816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ES.16651.44	chr18	+	4453	6	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	427.566883656815	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506951	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57521897_57522095_57522291
ES.16651.45	chr18	+	5899	4	FSM	ENSMUSG00000024594.10	ENSMUST00000236755.2	489	4	-11	-5399	-11	366	multi-exon	FALSE	canonical	3	294	junction_1	295.732987676384	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	57506952	57522673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245
ES.16651.46	chr18	+	4336	5	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	410.667977202995	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	False	NA	9	True	AATAAA	-19	NA	57506952	57526025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507156_57507598_57507763_57514671_57514804_57517245_57517349_57522291
ES.16651.47	chr18	+	4339	6	NNC	ENSMUSG00000024594.10	novel	523	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	421.458230433337	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57506952	57526028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517130_57517159_57517245_57517349_57522291
ES.16651.5	chr18	+	5238	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	340.52794885386	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGTGCAATGATTTA	NA	False	NA	8	True	AATAAA	-18	NA	57487812	57526024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57505764_57505977_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.7	chr18	+	1785	10	NNC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	0	366	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	340.409158310596	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGATCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	57487812	57522673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_57487964_57489659_57489770_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ES.16651.8	chr18	+	6625	8	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	1	3347	1	374	intron_retention	FALSE	canonical	3	500	junction_4	180.426026449645	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTCTTTTTACTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	57487813	57522681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245
ES.16651.9	chr18	+	3859	6	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	2	15491	2	-6737	5prime_fragment	FALSE	canonical	3	500	junction_4	24.9447389242702	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAAGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	57487814	57510537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598
ES.16652.1	chr18	-	2597	3	Intergenic	novelGene_13892	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTAACTCTCTCCTACTC	NA	False	NA	NA	False	NA	NA	NA	57516985	57506952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_57507100_57507598_57507761_57514697
ES.16653.1	chr18	+	2022	1	Genic_Genomic	ENSMUSG00000024597.12	novel	NA	NA	NA	NA	-617	-51602	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCAGAGGGCTGTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	58011132	58013154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_58011100_58013200
ES.16653.13	chr18	+	6769	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-275	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	34.5671672726366	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGTTTAATACTTACT	NA	False	NA	7	True	AATAAA	-14	NA	58011474	58079875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054825_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.14	chr18	+	6684	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-270	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	52.307579185398	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGTTTAATACTTACT	NA	False	NA	7	True	AATAAA	-14	NA	58011479	58079875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068072_58069379_58069503_58070731_58070844_58073206_58073308_58074141_58074198_58074847_58074893_58076987
ES.16653.18	chr18	+	6734	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-238	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	34.6855911970142	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATACTTACTCTTG	NA	False	NA	11	True	AATAAA	-18	NA	58011511	58079879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065561_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.19	chr18	+	7097	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-235	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.6129058941585	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACTCTTGCCTTTACC	NA	False	NA	19	True	AATAAA	-26	NA	58011514	58079887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031575_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.2	chr18	+	7128	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-607	-1	-607	1	multi-exon	TRUE	canonical	3	112	junction_7	17.8975139591274	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTACCTGTCATG	NA	False	NA	26	True	AATAAA	-33	NA	58011142	58079894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.20	chr18	+	6733	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-232	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.1942112475231	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATACTTACTCTTGC	NA	False	NA	12	True	AATAAA	-19	NA	58011517	58079880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029468_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.21	chr18	+	5509	18	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-231	-7354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.0170985995259	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	58011518	58057402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58013203_58013311_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817
ES.16653.22	chr18	+	7133	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-229	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.728265417204	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTTGCCTTTACCTGT	NA	False	NA	22	True	AATAAA	-29	NA	58011520	58079890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031575_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58068789_58068829_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.23	chr18	+	5307	1	Genic_Genomic	ENSMUSG00000024597.12	novel	NA	NA	NA	NA	-224	-47924	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTACTGGTCATTTCA	NA	False	NA	NA	False	ACTAAA	-22	NA	58011525	58016832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_58011500_58016800
ES.16653.24	chr18	+	4301	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-223	-2507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	51.7228554150949	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAATAAGAGTGAGTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	58011526	58077386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054816_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58068499_58068564_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.27	chr18	+	6601	26	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-136	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	34.7913552481073	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTACTCTTGCCT	NA	False	NA	14	True	AATAAA	-21	NA	58011613	58079882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074241_58076987
ES.16653.28	chr18	+	6409	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-121	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	34.0433436304638	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGTTTAATACTTACT	NA	False	NA	7	True	AATAAA	-14	NA	58011628	58079875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987_58079582_58079795
ES.16653.29	chr18	+	6524	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-119	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	58.1274996281257	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTACTCTTGCCTTTA	NA	False	NA	17	True	AATAAA	-24	NA	58011630	58079885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054939_58059478_58059531_58063226_58063307_58065551_58065678_58068022_58068072_58069379_58069503_58070731_58070844_58073206_58073294_58074113_58074217_58074824_58074893_58076987
ES.16653.31	chr18	+	6576	27	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-97	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	34.5739923460621	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTACTCTTGCCTTTA	NA	False	NA	17	True	AATAAA	-24	NA	58011652	58079885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059568_58063241_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.33	chr18	+	6822	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-76	-226	-76	226	multi-exon	FALSE	canonical	3	112	junction_7	17.8975139591274	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCGCTCCTGGGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	58011673	58080119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.35	chr18	+	6503	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.1117486037836	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTTGCCTTTACCTGT	NA	False	NA	22	True	AATAAA	-29	NA	58011700	58079890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58011811_58011870_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065554_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.36	chr18	+	6497	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	34.0433436304638	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCCTTTACCTGTCAT	NA	False	NA	25	True	AATAAA	-32	NA	58011701	58079893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074117_58074187_58074217_58074824_58074893_58076987
ES.16653.37	chr18	+	7351	1	NIC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	21841	-23815	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAAATATTGGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	58033590	58040941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_58033600_58040900
ES.16653.39	chr18	+	4791	18	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-21253	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.6855838066801	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGCCTTTACCTGTC	NA	False	NA	23	True	AATAAA	-30	NA	58039023	58079891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047338_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.4	chr18	+	5307	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-566	1779	-566	-1779	multi-exon	FALSE	canonical	3	112	junction_7	17.8975139591274	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGCACTGTTTCCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	58011183	58078114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.40	chr18	+	217	1	Intergenic	novelGene_13893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAAAAACAACAGA	NA	False	NA	NA	False	NA	NA	NA	58053730	58053947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_58053700_58053900
ES.16653.5	chr18	+	7756	28	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-563	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.3910209767916	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATACTTACTCTTG	NA	False	NA	11	True	AATAAA	-18	NA	58011186	58079879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033672_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58056633_58056854_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.6	chr18	+	7018	26	NIC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-560	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	34.8538434035617	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAATACTTACTCTTG	NA	False	NA	11	True	AATAAA	-18	NA	58011189	58079879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.7	chr18	+	4579	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	-559	2500	-559	-2500	multi-exon	FALSE	canonical	3	112	junction_7	17.8975139591274	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTGAGTTATTTTTTG	NA	False	NA	NA	False	AGTAAA	-26	NA	58011190	58077393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ES.16653.9	chr18	+	3962	4	NNC	ENSMUSG00000024597.12	novel	6520	27	NA	NA	-521	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.5419275081747	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAATACTTACTCTTGCC	NA	False	NA	13	True	AATAAA	-20	NA	58011228	58079881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58012617_58029353_58029474_58030415_58030477_58077488
ES.16654.1	chr18	-	6753	38	ISM	ENSMUSG00000024598.10	ENSMUST00000025497.8	11041	65	140466	-23	20956	23	3prime_fragment	FALSE	canonical	0	0	junction_12	2.18768717241601	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAATGGCTGGTCCATT	7674	False	NA	NA	False	AATAAA	-39	NA	58203093	58141671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_58143705_58145285_58145464_58146723_58146956_58151808_58151929_58153441_58153571_58154145_58154263_58156244_58156368_58158097_58158224_58159403_58159611_58160888_58161015_58168344_58168477_58168918_58169042_58170033_58170154_58170773_58170900_58171271_58171338_58172379_58172533_58173145_58173272_58176564_58176685_58177270_58177400_58178340_58178458_58180996_58181123_58181606_58181733_58181872_58181999_58183282_58183352_58186014_58186168_58186720_58186847_58187897_58188024_58188485_58188555_58189266_58189429_58191425_58191549_58192406_58192530_58194709_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019
ES.16655.1	chr18	+	2212	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	-232	1397	-232	787	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGTTTTCCATGA	NA	False	NA	21	True	ATTAAA	-22	NA	58792305	58812043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.10	chr18	+	4967	4	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	482	junction_3	34.7658836600865	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	58792545	58813440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_58792870_58804279_58804400_58804519_58806439_58810836
ES.16655.11	chr18	+	3399	5	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	228.158387967657	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGAAGGGTCCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	58792547	58813437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810801
ES.16655.12	chr18	+	2010	5	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-4	786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	231.033953132435	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTTGTTTTCCATG	NA	False	NA	20	True	ATTAAA	-21	NA	58792547	58812042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804279_58804400_58804519_58804724_58806280_58806439_58810836
ES.16655.13	chr18	+	3565	4	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-4	784	intron_retention	FALSE	canonical	3	482	junction_3	34.7658836600865	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTTTTGTTTTCCA	NA	False	NA	18	True	ATTAAA	-19	NA	58792547	58812040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_58792870_58804279_58804400_58804519_58806439_58810836
ES.16655.14	chr18	+	3305	5	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.433410409852	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	58792549	58813440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804339_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.15	chr18	+	1847	5	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-1	685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	231.033953132435	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACTCAAACATCTTT	NA	False	NA	10	True	AATAAA	-21	NA	58792550	58811941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804279_58804400_58804519_58804724_58806339_58806439_58810836
ES.16655.16	chr18	+	3251	5	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	230.604640022702	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGAAGGGTCCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	58792550	58813437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804279_58804400_58804519_58804614_58806321_58806439_58810836
ES.16655.17	chr18	+	3450	6	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.466850726968	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGAAGGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	58792559	58813436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58803876_58803976_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.18	chr18	+	1247	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	37	2093	23	91	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACGTACCACAATGATTT	NA	False	NA	NA	False	NA	NA	NA	58792574	58811347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.19	chr18	+	3982	3	Genic_Genomic	ENSMUSG00000024601.10	novel	3377	5	NA	NA	14949	685	multi-exon	TRUE	canonical	0	0	junction_1	0	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACTCAAACATCTTT	NA	False	NA	10	True	AATAAA	-21	NA	58807500	58811941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_58808434_58808496_58808742_58809137
ES.16655.2	chr18	+	3604	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	-221	-6	-221	6	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTGTGTATTGAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	58792316	58813446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.3	chr18	+	1889	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	-11	1499	-11	685	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACTCAAACATCTTT	NA	False	NA	10	True	AATAAA	-21	NA	58792526	58811941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.5	chr18	+	3393	6	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-4	6261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	207.542381214055	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGTCTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	58792533	58819701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836_58813436_58819684
ES.16655.6	chr18	+	3548	6	NNC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.466850726968	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGAAGGGTCCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	58792534	58813437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_58792870_58793773_58793945_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.8	chr18	+	2512	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	5	860	5	-860	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTATTATCTGGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	58792542	58812580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ES.16655.9	chr18	+	5085	3	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	7	-3	intron_retention	FALSE	canonical	3	482	junction_2	41.5	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGAAGGGTCCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	58792544	58813437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_58792870_58804279_58806439_58810836
ES.16656.1	chr18	+	179	1	Intergenic	novelGene_13894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGTGAGCTCAGAACT	NA	False	NA	NA	False	NA	NA	NA	58921113	58921292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_58921100_58921300
ES.16657.1	chr18	-	209	1	Intergenic	novelGene_13895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAATCTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	59006680	59006471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_59006500_59006700
ES.16658.1	chr18	+	6842	12	ISM	ENSMUSG00000053441.6	ENSMUST00000052907.7	5145	23	127974	382	-2767	8	3prime_fragment	FALSE	canonical	0	0	junction_1	0.642824346533225	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACATCTTAATTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	59097712	59186750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_59101926_59102954_59103128_59105773_59105902_59118312_59118434_59122015_59122097_59140399_59140558_59144074_59144229_59157518_59157655_59164844_59165050_59165959_59166113_59181865_59182044_59185608
ES.16659.1	chr18	-	171	1	Intergenic	novelGene_13896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTACAGCAT	NA	False	NA	NA	False	NA	NA	NA	60069488	60069317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_60069300_60069500
ES.1666.1	chr1	+	261	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGCAGCTCACGAGGA	NA	False	NA	NA	False	NA	NA	NA	156206295	156206556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156206300_156206600
ES.16660.1	chr18	-	168	1	Intergenic	novelGene_13897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60320772	60320604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_60320600_60320800
ES.16661.1	chr18	-	1055	1	Intergenic	novelGene_13898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTGCATGTTGACT	NA	False	NA	NA	False	ACTAAA	-15	NA	60377052	60375997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_60376000_60377100
ES.16662.1	chr18	+	205	1	Intergenic	novelGene_13899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	60612447	60612652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_60612400_60612700
ES.16663.1	chr18	+	202	1	Intergenic	novelGene_13900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAGTTTTCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	60618658	60618860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_60618700_60618900
ES.16664.1	chr18	-	1532	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	456	2	45	-2	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTTTTGTTTGTTTG	NA	False	NA	0	True	GATAAA	-13	NA	60634603	60607264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60608658_60634464
ES.16664.2	chr18	-	1459	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11803	-5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAACTGTGTTTTGTTTGT	7258	False	NA	-3	True	GATAAA	-10	NA	60622845	60607267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60608658_60622776
ES.16665.1	chr18	-	155	1	Intergenic	novelGene_13901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60637226	60637071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_60637100_60637200
ES.16666.1	chr18	+	3795	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	-60	3	-44	-3	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTGGTTTCACAAGT	NA	False	NA	31	True	AATAAA	-21	NA	60659212	60691835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.10	chr18	+	665	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	1	864	1	-864	multi-exon	FALSE	canonical	3	13	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCCTACTGTTGGGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	60659286	60660186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60659672
ES.16666.11	chr18	+	3735	14	FSM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	30	-817	1	-10	multi-exon	FALSE	canonical	0	0	junction_6	65.0224358184413	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTCTGTTTGGTTT	NA	False	NA	24	True	AATAAA	-14	NA	60659286	60691828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678428_60678450_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.12	chr18	+	5305	12	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	7	-10	intron_retention	FALSE	canonical	3	145	junction_8	21.0340141691051	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTCTGTTTGGTTT	NA	False	NA	24	True	AATAAA	-14	NA	60659296	60691828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.13	chr18	+	3625	14	NNC	ENSMUSG00000024603.9	novel	691	3	NA	NA	1290	-690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.9278439396264	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCATGCCCTGTTCTAT	NA	False	NA	11	True	ATTAAA	-14	NA	60660579	60690321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60661435_60666795_60667510_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.14	chr18	+	9769	2	ISM	ENSMUSG00000024603.9	ENSMUST00000224778.2	691	3	566	-9245	566	574	3prime_fragment	FALSE	canonical	3	167	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAAGACAGAAA	NA	False	NA	NA	False	NA	NA	NA	60678902	60689104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60679406_60679838
ES.16666.15	chr18	+	4926	2	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	3248	565	intron_retention	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	60681584	60689095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60683332_60685916
ES.16666.16	chr18	+	1980	5	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	23377	691	4297	-691	3prime_fragment	FALSE	canonical	3	145	junction_1	15.9902313929474	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCATGCCCTGTTCTA	NA	False	NA	10	True	ATTAAA	-13	NA	60682633	60690320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.17	chr18	+	3720	2	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	27816	7	-1135	-7	3prime_fragment	FALSE	canonical	3	185	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTGTTTGGTTTCAC	NA	False	NA	27	True	AATAAA	-17	NA	60687088	60691831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60688277_60689299
ES.16666.18	chr18	+	3545	1	FSM	ENSMUSG00000024603.9	ENSMUST00000224671.2	307	1	60	-3298	60	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTCTGTTTGGTTT	NA	False	NA	24	True	AATAAA	-14	NA	60688283	60691828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60688300_60691800
ES.16666.2	chr18	+	4053	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	-31	-284	-15	284	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTGTGGTAGCGCA	NA	False	NA	5	True	AATAAA	-17	NA	60659241	60692122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.3	chr18	+	5731	11	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	-3	-10	intron_retention	FALSE	canonical	3	145	junction_7	21.0959711793508	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTCTGTTTGGTTT	NA	False	NA	24	True	AATAAA	-14	NA	60659269	60691828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.4	chr18	+	2223	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	-1	1516	-1	-689	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATGCCCTGTTCTATA	NA	False	NA	12	True	ATTAAA	-15	NA	60659271	60690322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.5	chr18	+	3593	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	1	144	1	-144	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCCCTTGCATCGTTG	NA	False	NA	NA	False	AATACA	-20	NA	60659273	60691694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.6	chr18	+	2241	14	FSM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	20	687	4	-687	multi-exon	FALSE	canonical	0	0	junction_6	65.0224358184413	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCCCTGTTCTATAAA	NA	False	NA	14	True	ATTAAA	-17	NA	60659276	60690324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678428_60678450_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.7	chr18	+	3842	12	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	5	-692	intron_retention	FALSE	canonical	3	146	junction_8	20.7937530352088	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCCATGCCCTGTTCT	NA	False	NA	9	True	ATTAAA	-12	NA	60659277	60690319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.8	chr18	+	3545	12	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	5	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	51.2317695856393	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTCTGTTTGGTTTC	NA	False	NA	25	True	AATAAA	-15	NA	60659277	60691829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60659438_60667664_60667736_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16666.9	chr18	+	3810	12	NIC	ENSMUSG00000024603.9	novel	3738	13	NA	NA	0	-689	intron_retention	FALSE	canonical	3	145	junction_8	21.0340141691051	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCATGCCCTGTTCTATA	NA	False	NA	12	True	ATTAAA	-15	NA	60659285	60690322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ES.16667.1	chr18	-	755	2	Antisense	novelGene_ENSMUSG00000024603.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTTCCTTGGCCTC	712	False	NA	NA	False	AATAAA	-43	NA	60659506	60655842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_60656121_60659029
ES.16668.1	chr18	-	999	1	Antisense	novelGene_ENSMUSG00000024603.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGCAGACAGGTAACTA	NA	False	NA	NA	False	CATAAA	-34	NA	60692242	60691243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_60691200_60692200
ES.16669.1	chr18	+	1740	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	-5	475	-5	343	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTATTTGGTATTT	NA	False	NA	NA	False	AAAAAG	-14	NA	60693802	60705407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.11	chr18	+	5359	8	NIC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	2	-85	intron_retention	FALSE	canonical	3	519	junction_7	82.0920339668614	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGGACTTATGTTTC	NA	False	NA	18	True	ATTAAA	-19	NA	60693837	60705797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.12	chr18	+	2781	10	ISM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	32	88	0	-88	intron_retention	FALSE	canonical	3	524	junction_8	65.7882874486948	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693839	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071
ES.16669.13	chr18	+	2133	12	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	1	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.099337604592	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693840	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60695872_60695917_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.14	chr18	+	2296	13	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	2	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	275.233688587232	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693841	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60695555_60695720_60695872_60695917_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.15	chr18	+	2492	11	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	18	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	203.205216468476	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693857	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60703014_60703852_60703942_60704071_60704204_60704894
ES.16669.16	chr18	+	1184	7	NNC	ENSMUSG00000024604.8	novel	3541	7	NA	NA	23	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	257.550480488777	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693862	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60705190
ES.16669.17	chr18	+	2149	11	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	23	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	252.839949375094	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693862	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60696916_60697029_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.18	chr18	+	1892	10	ISM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	214	475	182	343	3prime_fragment	FALSE	canonical	3	519	junction_9	76.524505878836	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTATTTGGTATTT	NA	False	NA	NA	False	AAAAAG	-14	NA	60694021	60705407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.19	chr18	+	1979	10	ISM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	514	88	482	-88	3prime_fragment	FALSE	canonical	3	519	junction_9	76.524505878836	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60694321	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.2	chr18	+	2216	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	0	-6	0	6	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTGGATTATTTTTT	NA	False	NA	41	True	AGTAAA	-36	NA	60693807	60705888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.20	chr18	+	4845	5	NIC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	3716	-88	intron_retention	FALSE	canonical	3	566	junction_2	35.202095108104	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60697555	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60698791_60699424_60699598_60700442_60700644_60702428_60703942_60704071
ES.16669.3	chr18	+	2348	12	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	11	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	286.881292581196	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGAATTTTTTTCAAT	NA	False	NA	18	True	ATTAAA	-28	NA	60693818	60705865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60694377_60695555_60695720_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702596_60703852_60703942_60704071_60704204_60704894
ES.16669.5	chr18	+	3371	10	NIC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	13	-85	intron_retention	FALSE	canonical	3	519	junction_9	66.8133571328221	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGGACTTATGTTTC	NA	False	NA	18	True	ATTAAA	-19	NA	60693820	60705797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60703942_60704071_60704204_60704894
ES.16669.6	chr18	+	3895	10	NIC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	-13	-85	intron_retention	FALSE	canonical	3	519	junction_9	76.4651134848233	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGGACTTATGTTTC	NA	False	NA	18	True	ATTAAA	-19	NA	60693822	60705797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.7	chr18	+	2952	10	NIC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	-13	-88	intron_retention	FALSE	canonical	3	519	junction_9	73.226352943678	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCTGGACTTATGT	NA	False	NA	15	True	ATTAAA	-16	NA	60693822	60705794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ES.16669.9	chr18	+	4325	11	NNC	ENSMUSG00000024604.8	novel	2210	11	NA	NA	-2	-89	intron_retention	FALSE	canonical	0	0	junction_10	197.227381466165	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTTGCTGGACTTATG	NA	False	NA	14	True	ATTAAA	-15	NA	60693833	60705793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60693952_60694322_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894_60705347_60705577
ES.1667.1	chr1	+	238	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTATTAGATATT	9023	False	NA	NA	False	AATAAA	-13	NA	156222172	156222410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156222200_156222400
ES.16670.1	chr18	-	4955	3	FSM	ENSMUSG00000043079.18	ENSMUST00000097566.10	5060	3	89	16	-11	1	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCCTCCTGTTCGTC	NA	False	NA	NA	False	AATAAA	-13	NA	60757319	60727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60729561_60735184_60737563_60757242
ES.16670.2	chr18	-	4430	2	ISM	ENSMUSG00000043079.18	ENSMUST00000097566.10	5060	3	20	6234	20	0	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTCTTTCTTCTG	NA	False	NA	0	True	AATACA	-15	NA	60757388	60733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60737563_60757242
ES.16671.1	chr18	-	2063	1	NIC	ENSMUSG00000043079.18	novel	1926	4	NA	NA	5356	-7066	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAGAAAAA	5950	False	NA	NA	False	NA	NA	NA	60787858	60785795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60785800_60787900
ES.16672.1	chr18	+	729	5	NIC	ENSMUSG00000024608.12	novel	755	6	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11701.1630698619	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60880069	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60880294_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.10	chr18	+	1082	4	ISM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	55	1	-14	0	intron_retention	FALSE	canonical	3	20921	junction_1	3285.52556255802	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907722	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884
ES.16672.12	chr18	+	1798	3	FSM	ENSMUSG00000024608.12	ENSMUST00000142980.2	662	3	-11	-1125	-10	-1	multi-exon	FALSE	canonical	3	20921	junction_1	3556	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGGTTCTGGTGTTGT	NA	False	NA	66	True	AATAAA	-16	NA	60907726	60911616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60907759_60909472_60909624_60910001
ES.16672.13	chr18	+	529	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10943.7120616133	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGGTTCTGGTGTTGT	NA	False	NA	66	True	AATAAA	-16	NA	60907727	60911616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910890_60910962_60911502
ES.16672.14	chr18	+	540	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10943.7120616133	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTTGGTTCTGGTG	NA	False	NA	62	True	AATAAA	-12	NA	60907728	60911612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60907759_60909472_60909624_60910001_60910174_60910884_60910962_60911502
ES.16672.15	chr18	+	2249	4	FSM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	-1582	0	-8	0	multi-exon	FALSE	canonical	3	24831	junction_3	1445.1337500576	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907728	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.17	chr18	+	1242	4	NIC	ENSMUSG00000024608.12	novel	785	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	20921	junction_1	2908.25354236295	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTGGTTCTGGTGTTG	NA	False	NA	65	True	AATAAA	-15	NA	60907740	60911615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60907759_60909472_60909624_60910001_60910962_60911502
ES.16672.18	chr18	+	670	5	NIC	ENSMUSG00000024608.12	novel	667	4	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11695.9967376663	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60908224	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60908390_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.2	chr18	+	810	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	-209	-4	-209	4	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGTGTTGTGTTTTA	NA	False	NA	72	True	AATAAA	-22	NA	60907458	60911622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.3	chr18	+	3534	2	ISM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	-1605	0	-31	0	intron_retention	FALSE	canonical	3	28033	junction_1	0	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907705	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60909624_60910001
ES.16672.5	chr18	+	638	5	FSM	ENSMUSG00000024608.12	ENSMUST00000118551.8	602	5	-32	-4	-16	0	multi-exon	FALSE	canonical	3	252	junction_1	11592.6756914657	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907720	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60907854_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.6	chr18	+	3897	1	FSM	ENSMUSG00000024608.12	ENSMUST00000236441.2	987	1	-16	-2894	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1862	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907720	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60907700_60911600
ES.16672.7	chr18	+	535	5	NNC	ENSMUSG00000024608.12	novel	755	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11701.1630698619	1862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTCTGGTGTTGTG	NA	False	NA	67	True	AATAAA	-17	NA	60907720	60911617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_60907759_60909480_60909624_60910001_60910164_60910884_60910962_60911502
ES.16672.8	chr18	+	3354	2	NIC	ENSMUSG00000024608.12	novel	667	4	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	24831	junction_1	0	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGGTTCTGGTGTTGT	NA	False	NA	66	True	AATAAA	-16	NA	60907721	60911616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_60910962_60911502
ES.16673.1	chr18	-	7896	15	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-373	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	10.8871765047187	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTCTTGTTCTTGTGT	NA	False	NA	-5	True	AATAAA	-20	NA	60882095	60817563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881998
ES.16673.11	chr18	-	7160	14	NIC	ENSMUSG00000054008.10	novel	6070	14	NA	NA	66	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	11.923821316713	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGTCTTGTTCTTG	NA	False	NA	-8	True	AATAAA	-17	NA	60881656	60817566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60881382
ES.16673.13	chr18	-	7897	14	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-25954	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.6277649059323	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGTGGGTCTTGTTCTT	NA	False	NA	-9	True	AATAAA	-16	NA	60907676	60817567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60907391
ES.16673.15	chr18	-	7887	15	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-7028	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.9514323281303	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACGTGGGTCTTGTTCT	4082	False	NA	-10	True	AATAAA	-15	NA	60873250	60817568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60873157
ES.16673.18	chr18	-	6489	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	-11	0	-11	0	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	60881733	60819034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
ES.16673.19	chr18	-	6431	15	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-7038	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.9514323281303	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTTGTTTGTTTG	4072	False	NA	NA	False	ATTAAA	-13	NA	60873260	60819034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60873157
ES.16673.2	chr18	-	6447	8	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.2811925842284	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGTCTTGTTCTTGTG	NA	False	NA	-6	True	AATAAA	-19	NA	60881725	60817564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830177_60845879_60846705_60881572
ES.16673.20	chr18	-	6520	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	60881574	60819034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
ES.16673.21	chr18	-	4095	15	NNC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-7037	1788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.9514323281303	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTGTTTTTTTTT	4073	False	NA	NA	False	NA	NA	NA	60873259	60821340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60873186
ES.16673.22	chr18	-	4209	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	-37	2306	-37	1788	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	60881759	60821340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
ES.16673.23	chr18	-	3632	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-79	1213	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCATAGTTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	60881567	60821915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
ES.16673.24	chr18	-	1602	3	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	62	5500	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	16	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCATGTGTATTCTGG	NA	False	NA	NA	False	ATTAAA	-10	NA	60881426	60840519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60841168_60845794_60846705_60881382
ES.16673.3	chr18	-	8002	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	-54	-1470	-54	1	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGTCTTGTTCTTGTG	NA	False	NA	-6	True	AATAAA	-19	NA	60881776	60817564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
ES.16673.5	chr18	-	8151	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_14	10.0957153975216	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGGTCTTGTTCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	60881736	60817565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881382
ES.16673.6	chr18	-	7961	15	NIC	ENSMUSG00000054008.10	novel	6478	15	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	11.9514323281303	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGTCTTGTTCTTG	NA	False	NA	-8	True	AATAAA	-17	NA	60866244	60817566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60866079
ES.16673.8	chr18	-	6900	6	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	14852	-1483	-1465	-1	intron_retention	FALSE	canonical	3	24	junction_2	4.14728827066554	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGTCTTGTTCTTG	NA	False	NA	-8	True	AATAAA	-17	NA	60831609	60817566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138
ES.16674.1	chr18	+	1394	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	-174	4	-174	2	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCTTGCTTCTGCCTC	NA	False	NA	3	True	AATAAA	-13	NA	60936745	60945720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
ES.16674.2	chr18	+	1567	9	FSM	ENSMUSG00000024610.16	ENSMUST00000097563.9	1410	9	-155	-2	-155	2	multi-exon	FALSE	canonical	1	2	junction_6	11.7020297384685	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCTTGCTTCTGCCTC	NA	False	NA	3	True	AATAAA	-13	NA	60936764	60945720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944365_60944558_60944930_60944994_60945223
ES.16674.3	chr18	+	1285	8	ISM	ENSMUSG00000024610.16	ENSMUST00000167610.2	1345	10	4025	-11	3976	5	intron_retention	FALSE	canonical	1	2	junction_5	12.4408806040441	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGCCTCTTCAGTTGG	NA	False	NA	12	True	AATAAA	-22	NA	60940952	60945729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944365_60944558_60944930_60944994_60945223
ES.16675.1	chr18	+	1659	3	Antisense	novelGene_ENSMUSG00000024613.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTACCAATATTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	60960561	60962494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_60961632_60961727_60961907_60962084
ES.16675.2	chr18	+	1835	2	Antisense	novelGene_ENSMUSG00000024613.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTACCAATATTTTGG	NA	False	NA	NA	False	NA	NA	NA	60960561	60962492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_60961632_60961727
ES.16675.3	chr18	+	1391	1	Antisense	novelGene_ENSMUSG00000024613.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60961083	60962474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_60961100_60962500
ES.16676.103	chr18	-	4244	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	3	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	304.219558757414	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982028	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948093_60949301_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.104	chr18	-	4558	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_7	318.760725309753	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982015	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952641_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.105	chr18	-	4492	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	302.575515711918	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982021	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952011_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.107	chr18	-	11683	20	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	11	junction_3	297.725802945617	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982033	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60951101_60951283_60951933_60952017_60952459_60954837_60955875_60961632_60961727_60962188_60964584_60964753_60964845_60965068_60965237_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.108	chr18	-	4563	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	385.24960428273	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982003	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948106_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971928_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.11	chr18	-	4557	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	15	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	415.225536786937	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGGACTCGGACTGT	NA	False	NA	-2	True	AATAAA	-33	NA	60981975	60946810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60952818_60952895_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962081_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.110	chr18	-	7492	19	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	9661	-9	intron_retention	FALSE	canonical	2	677	junction_7	225.41474121174	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60971857	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60951283_60951933_60952017_60952459_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746
ES.16676.111	chr18	-	5342	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	363.490056030881	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981993	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948987_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.114	chr18	-	4913	24	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-5	-9	intron_retention	FALSE	canonical	0	0	junction_5	309.735035248665	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982006	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951270_60951933_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.115	chr18	-	4637	27	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	374.849628628388	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981976	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60952818_60952895_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.116	chr18	-	3030	8	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	7832	-9	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_7	467.965723496227	1622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60954267	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60952818
ES.16676.117	chr18	-	4572	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	372.432101731309	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981989	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962081_60962188_60964584_60964753_60964851_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.118	chr18	-	4507	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	302.674593783856	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982036	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964747_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.12	chr18	-	4467	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	29	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	376.880203114995	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATCTGGGACTCGGACT	NA	False	NA	-4	True	AATAAA	-31	NA	60981961	60946812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965782_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976301_60976444_60978882_60978939_60981822
ES.16676.121	chr18	-	4358	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-14	-9	combination_of_known_junctions	FALSE	canonical	2	104	junction_7	337.139725791836	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982015	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.123	chr18	-	7465	8	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	1963	-9	intron_retention	FALSE	canonical	3	1176	junction_3	147.848792034708	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60960136	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875
ES.16676.125	chr18	-	4377	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	18	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	317.983356373499	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981972	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.126	chr18	-	4581	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	303.457816508325	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982015	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956044_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.127	chr18	-	4374	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	50	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	418.280032514104	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981940	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949068_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962081_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968811_60968861_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.13	chr18	-	4152	23	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	25	13	combination_of_known_splicesites	FALSE	canonical	2	130	junction_12	339.149193747877	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCATCTGGGACTCGGAC	NA	False	NA	-5	True	AATAAA	-30	NA	60981965	60946813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.130	chr18	-	3610	22	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-2	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	343.304331381907	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982033	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60964878_60968779_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.133	chr18	-	4495	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_13	295.749753451574	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982024	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964851_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.135	chr18	-	4417	25	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	363.697960672344	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982012	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972670_60976297_60976444_60978882_60978939_60981822
ES.16676.136	chr18	-	4403	25	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4298	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	325.418021764144	1637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60977220	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60977168
ES.16676.14	chr18	-	4457	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-3	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	301.997444686577	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCATCTGGGACTCGGAC	NA	False	NA	-5	True	AATAAA	-30	NA	60982004	60946813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954842_60955926_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.140	chr18	-	3344	19	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-3898	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	372.503774112955	1635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60965997	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961798_60961865_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792
ES.16676.145	chr18	-	4407	26	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	361.528634550571	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982022	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961904_60962081_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822_60981904_60981995
ES.16676.147	chr18	-	1968	10	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	425.740081838615	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60982022	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60978873_60978939_60981822
ES.16676.149	chr18	-	5368	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	134	-9	intron_retention	FALSE	canonical	2	104	junction_7	297.619572142395	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	False	NA	-27	True	AATAAA	-8	NA	60981856	60946835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60960411_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.152	chr18	-	4479	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	2	104	junction_7	350.628659121331	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACTTTAAATATA	NA	False	NA	-40	True	TTTAAA	-9	NA	60982041	60946848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.153	chr18	-	4414	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-26	207	4	-207	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTTGCCTCTCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	60982027	60947033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.155	chr18	-	4077	24	ISM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-14	1255	-14	987	5prime_fragment	FALSE	canonical	2	549	junction_7	212.405780290804	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGGCCAAAGACTCTG	NA	False	NA	29	True	AAAAAG	-35	NA	60982015	60948081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.156	chr18	-	2702	1	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	11273	944	mono-exon	FALSE	NA	NA	NA	NA	NA	1605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGACAAGGAGAAA	NA	False	NA	-14	True	NA	NA	NA	60950826	60948124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60948100_60950800
ES.16676.157	chr18	-	3934	22	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	16	2250	4	-8	5prime_fragment	FALSE	canonical	2	677	junction_6	175.197161368197	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTAAGTGACTGCTTTC	NA	False	NA	-4	True	AAAAAG	-13	NA	60982027	60949076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.158	chr18	-	3948	23	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	45	-14	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_11	303.231783398129	1634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTCAAGAGTAAGTGACT	NA	False	NA	-10	True	AAAAAG	-7	NA	60981945	60949082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964851_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.159	chr18	-	3985	23	ISM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	13	2268	2	-26	5prime_fragment	FALSE	canonical	2	549	junction_6	216.459776195818	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGAAATCCCTCAA	NA	False	NA	-22	True	GATAAA	-41	NA	60981988	60949094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.160	chr18	-	173	1	Intergenic	novelGene_13902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGCCAGTAAGCAT	NA	False	NA	NA	False	NA	NA	NA	60953298	60953125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_60953100_60953300
ES.16676.161	chr18	-	5886	1	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	984	-4128	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACTGTGTCGTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	60961115	60955229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60955200_60961100
ES.16676.162	chr18	-	5041	16	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	31	12168	-11	2144	5prime_fragment	FALSE	canonical	2	697	junction_2	162.766035223023	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCGTTTGCCTGCATG	NA	False	NA	NA	False	CATAAA	-14	NA	60982012	60958994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.163	chr18	-	4549	16	ISM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	15	12676	3	1636	5prime_fragment	FALSE	canonical	2	697	junction_2	162.766035223023	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTGCAGATCTGGGG	NA	False	NA	NA	False	ATTAAA	-32	NA	60982028	60959502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.165	chr18	-	2996	16	ISM	ENSMUSG00000024613.17	ENSMUST00000163446.9	4064	23	37	11953	-4	117	5prime_fragment	FALSE	canonical	2	697	junction_2	162.766035223023	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACCATTGTCCAGTTCT	NA	False	NA	NA	False	AAGAAA	-18	NA	60981994	60961021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.166	chr18	-	2305	2	ISM	ENSMUSG00000024613.17	ENSMUST00000177172.8	3229	20	16	25684	16	-5031	5prime_fragment	FALSE	canonical	3	1295	junction_1	0	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60981974	60976785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_60978939_60981822
ES.16676.17	chr18	-	3874	22	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	293.114203865893	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTTCCCCATGCATC	NA	False	NA	-17	True	AATAAA	-18	NA	60982012	60946825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954792_60962103_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.18	chr18	-	4432	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	23	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	418.975536278671	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981967	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947631_60948029_60948125_60949082_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962086_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.2	chr18	-	4598	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	-50	-19	-50	19	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACTCGGACTGTTAC	NA	False	NA	1	True	AATAAA	-36	NA	60982093	60946807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.25	chr18	-	4592	26	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	359.94698276274	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982024	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60947772_60947855_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.28	chr18	-	4607	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	322.557395822821	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981997	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972722_60976297_60976444_60978882_60978939_60981822
ES.16676.29	chr18	-	4607	26	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	104	junction_7	308.219594445259	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982003	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.3	chr18	-	4703	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	-89	-19	-47	19	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACTCGGACTGTTAC	NA	False	NA	1	True	AATAAA	-36	NA	60982090	60946807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.30	chr18	-	5679	24	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	3	0	intron_retention	FALSE	canonical	2	549	junction_9	214.796047810497	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981998	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.31	chr18	-	4455	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	282.65887848766	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982015	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.35	chr18	-	4614	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	381.081270072409	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982028	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951270_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964579_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.36	chr18	-	4105	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	327.043022993748	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982039	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.37	chr18	-	4053	13	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-1942	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	496.253204579633	1635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60964041	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962086_60962749_60962924
ES.16676.38	chr18	-	4470	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_7	300.589533597451	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982026	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952641_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.39	chr18	-	4534	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	304.491650017789	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982032	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972722_60976297_60976444_60978882_60978939_60981822
ES.16676.4	chr18	-	4499	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	1	19	combination_of_known_junctions	FALSE	canonical	2	235	junction_15	290.105763759817	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACTCGGACTGTTAC	NA	False	NA	1	True	AATAAA	-36	NA	60982030	60946807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.40	chr18	-	3407	21	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	393.690563768044	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982032	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961826_60965936_60966003_60966491_60966705_60968726_60968811_60968861_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.41	chr18	-	4469	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	130	junction_13	309.116247011811	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982043	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.44	chr18	-	4485	25	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	104	junction_7	288.611366431285	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981989	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.45	chr18	-	4229	23	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	358.73599261392	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982033	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60978882_60978939_60981822
ES.16676.48	chr18	-	4556	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	317.309454003501	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981989	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965355_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.49	chr18	-	4606	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	368.705727647402	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981997	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60976830_60976954_60978882_60978939_60981822
ES.16676.52	chr18	-	4315	24	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	3463	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	308.215407207485	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60978055	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60977992
ES.16676.58	chr18	-	4345	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	130	junction_12	289.236874817602	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982027	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.59	chr18	-	4444	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	304.339676823264	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981994	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972670_60976297_60976444_60978882_60978939_60981822
ES.16676.6	chr18	-	4546	27	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-25	17	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_13	357.912754649549	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGACTCGGACTGTT	NA	False	NA	-1	True	AATAAA	-34	NA	60982068	60946809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964579_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822_60981867_60982004
ES.16676.61	chr18	-	4615	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	320.444676036286	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982027	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952011_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.64	chr18	-	4264	24	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	376.74676476873	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982026	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962081_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.65	chr18	-	4021	12	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-2629	0	intron_retention	FALSE	canonical	2	677	junction_8	259.732507027156	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60964728	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584
ES.16676.66	chr18	-	4405	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	356.526545435259	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982006	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968811_60968861_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.67	chr18	-	4573	27	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	316.2935986272	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982027	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968814_60968861_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.69	chr18	-	11142	22	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	51	0	intron_retention	FALSE	canonical	2	104	junction_6	359.532033964586	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60981939	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.7	chr18	-	4427	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-25	17	combination_of_known_junctions	FALSE	canonical	2	235	junction_14	265.896614216495	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGACTCGGACTGTT	NA	False	NA	-1	True	AATAAA	-34	NA	60982068	60946809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.72	chr18	-	3990	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	309.042413934699	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982032	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.75	chr18	-	2967	16	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-3147	0	at_least_one_novel_splicesite	FALSE	canonical	1	70	junction_15	385.952236538265	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60965246	60946826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965153
ES.16676.8	chr18	-	9853	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	14	17	intron_retention	FALSE	canonical	2	697	junction_10	174.868970660352	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGACTCGGACTGTT	NA	False	NA	-1	True	AATAAA	-34	NA	60981976	60946809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.80	chr18	-	2905	15	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	381.298753992087	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60981980	60946829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60981838
ES.16676.83	chr18	-	3539	21	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	300.922328018377	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60981988	60946829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60955943_60965012_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.85	chr18	-	4619	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	322.024361811339	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60982006	60946829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948147_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.86	chr18	-	4424	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_1	283.040584055047	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60982032	60946829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947170_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.91	chr18	-	4580	26	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	-28	-3	combination_of_known_junctions	FALSE	canonical	2	14	junction_25	317.824419451999	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGCCTTCCCCATG	NA	False	NA	-21	True	AATAAA	-14	NA	60981546	60946829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981379
ES.16676.96	chr18	-	4134	26	NNC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	430.130502987175	1639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGCCTTCCCCA	NA	False	NA	-23	True	AATAAA	-12	NA	60981997	60946831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_60947261_60947594_60947641_60948029_60948125_60951101_60951283_60951933_60952017_60952459_60952683_60952818_60952895_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16676.99	chr18	-	14992	20	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	-6	-7	intron_retention	FALSE	canonical	2	697	junction_6	191.939135089609	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAAGGTTTGCCTTCCC	NA	False	NA	-25	True	AATAAA	-10	NA	60982007	60946833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_60947261_60947594_60947641_60948029_60952017_60952459_60954837_60955875_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ES.16677.1	chr18	+	234	1	Intergenic	novelGene_13903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACGATCAGAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	61040583	61040817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61040600_61040800
ES.16678.1	chr18	-	176	1	Intergenic	novelGene_13904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	264	False	NA	NA	False	NA	NA	NA	61065169	61064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61065000_61065200
ES.16679.1	chr18	+	2011	10	ISM	ENSMUSG00000024617.17	ENSMUST00000102888.10	4970	18	29922	6777	-8014	-3488	internal_fragment	FALSE	canonical	0	0	junction_3	1.6629588385662	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	61088611	61114447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61088712_61090175_61090260_61090371_61090467_61091212_61091336_61091644_61091729_61093074_61093118_61096994_61097036_61103065_61103115_61111011_61111088_61113131
ES.16679.2	chr18	+	2696	6	NNC	ENSMUSG00000024617.17	novel	1734	6	NA	NA	-70	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.85472369909914	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	61096555	61119474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61097036_61103065_61103115_61111011_61111088_61113131_61113368_61117397_61117627_61117848
ES.16679.3	chr18	+	4419	1	NIC	ENSMUSG00000024617.17	novel	4970	18	NA	NA	11635	-5210	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACGCACCTTCCTCC	2260	False	NA	NA	False	NA	NA	NA	61108306	61112725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61108300_61112700
ES.16679.4	chr18	+	3485	2	ISM	ENSMUSG00000024617.17	ENSMUST00000039904.7	1734	6	20686	-2295	20686	-160	3prime_fragment	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGAGTCCGTGTCTTCC	70	False	NA	25	True	AATAAA	-13	NA	61117357	61121064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61117627_61117848
ES.1668.1	chr1	+	174	1	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	156232116	156232290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156232100_156232300
ES.16680.1	chr18	-	176	1	Intergenic	novelGene_13905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	61115074	61114898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61114900_61115100
ES.16681.1	chr18	-	3366	8	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	9764	5	intron_retention	FALSE	canonical	3	6	junction_7	5.09100848034442	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGACTCTGCTACAAAAG	NA	False	NA	0	True	AATAAA	-24	NA	61137514	61128446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136973_61137460
ES.16681.10	chr18	-	4036	13	NIC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	14	-2	intron_retention	FALSE	canonical	2	6	junction_9	5.33853912601566	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTACCTGACTCTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	61147264	61128453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61129904_61133493_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
ES.16681.11	chr18	-	3290	14	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.70580520327775	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTACCTGACTCTGCT	NA	False	NA	-7	True	AATAAA	-17	NA	61147259	61128453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136399_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
ES.16681.12	chr18	-	3586	15	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.68076740062281	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTTACCTGACTCTGC	NA	False	NA	-8	True	AATAAA	-16	NA	61147288	61128454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61143025_61143255_61147048
ES.16681.13	chr18	-	4344	9	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	7248	-3	intron_retention	FALSE	canonical	1	2	junction_5	6.46988214730377	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTTACCTGACTCTGC	NA	False	NA	-8	True	AATAAA	-16	NA	61140030	61128454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61134465_61134641_61134742_61135194_61135327_61135397_61135479_61136312_61136438_61136558_61136663_61137460_61137596_61138783
ES.16681.14	chr18	-	4738	11	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	6388	-3	intron_retention	FALSE	canonical	3	6	junction_8	4.4497190922574	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTTACCTGACTCTGC	NA	False	NA	-8	True	AATAAA	-16	NA	61140890	61128454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136973_61137460_61137596_61138783_61140682_61140787
ES.16681.15	chr18	-	3517	15	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	6.31850214748362	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTTACCTGACTCTGC	NA	False	NA	-8	True	AATAAA	-16	NA	61147300	61128454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61141020_61141169_61142493_61142678_61147048
ES.16681.16	chr18	-	7000	16	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	128	-7	intron_retention	FALSE	canonical	0	0	junction_2	8.05701902415252	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTCATCTTTACCTGACT	NA	False	NA	-12	True	AATAAA	-12	NA	61147150	61128458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133693_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136973_61137460_61137596_61138783_61140682_61140787_61140920_61141020_61141936_61142493_61142678_61143699_61144615_61144982_61145073_61147048
ES.16681.17	chr18	-	4005	4	NIC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	11856	-2265	intron_retention	FALSE	canonical	3	14	junction_2	0.942809041582063	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACCCCAGACATACCA	NA	False	NA	NA	False	NA	NA	NA	61135422	61130716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61134465_61134641_61134742_61135194_61135327_61135397
ES.16681.18	chr18	-	7185	3	NIC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	9101	-2293	intron_retention	FALSE	canonical	3	16	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61138177	61130744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61134465_61134641_61135327_61135397
ES.16681.2	chr18	-	3378	14	FSM	ENSMUSG00000052026.9	ENSMUST00000025520.10	3366	14	-12	0	-12	0	multi-exon	FALSE	canonical	2	6	junction_10	5.15671561910596	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCTGACTCTGCTAC	NA	False	NA	-5	True	AATAAA	-19	NA	61147306	61128451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
ES.16681.4	chr18	-	3316	14	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	1840	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.05790597913759	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCTGACTCTGCTA	NA	False	NA	-6	True	AATAAA	-18	NA	61145438	61128452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61145241
ES.16681.7	chr18	-	5297	14	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1	junction_11	6.93417913214581	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCTGACTCTGCTA	NA	False	NA	-6	True	AATAAA	-18	NA	61147276	61128452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135479_61136312_61136438_61136558_61136973_61137460_61137596_61138783_61140682_61140787_61140920_61141020_61141169_61142493_61142678_61147048
ES.16681.8	chr18	-	3219	13	NIC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.52959210872636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCTGACTCTGCTA	NA	False	NA	-6	True	AATAAA	-18	NA	61147316	61128452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61129904_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
ES.16681.9	chr18	-	1657	9	NNC	ENSMUSG00000052026.9	novel	3366	14	NA	NA	8354	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.73212459828649	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCTGACTCTGCTA	NA	False	NA	-6	True	AATAAA	-18	NA	61138924	61128452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61128782_61129789_61129904_61133493_61133676_61135190_61135327_61135397_61135479_61136312_61136438_61136558_61136973_61137460_61137596_61138783
ES.16682.1	chr18	-	1886	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	-130	-6	-130	6	multi-exon	FALSE	canonical	3	995	junction_1	57.5	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTTTCTCGTGATTGT	7624	False	NA	1	True	ATTAAA	-28	NA	61169401	61151927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61153014_61153445_61153592_61168747
ES.16682.2	chr18	-	1872	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	439.390486924785	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTGCCATCCTTTCTC	7733	False	NA	-7	True	ATTAAA	-20	NA	61169292	61151935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61153014_61153445_61153592_61157113_61157217_61168747
ES.16682.3	chr18	-	1852	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	468.341992802506	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCTGCCATCCTTTCTC	7736	False	NA	-7	True	ATTAAA	-20	NA	61169289	61151935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61153014_61153445_61153592_61168495_61168582_61168747
ES.16682.6	chr18	-	4575	1	NIC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	12760	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	566	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCGCTGCCATCCTTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	61156511	61151936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61151900_61156500
ES.16683.1	chr18	+	5146	24	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	-8563	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	4.51001825387476	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGATTTCTCAGGGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	61169658	61218133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61169697_61178517_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
ES.16683.2	chr18	+	5448	23	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	-43	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	4.07370118225601	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGATTTCTCAGGGTTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	61178178	61218134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
ES.16683.3	chr18	+	4076	17	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	20481	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	4.09219913371771	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACCGATTTCTCAGGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	61198752	61218131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
ES.16683.5	chr18	+	2909	16	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	20500	2319	20500	-2319	internal_fragment	FALSE	canonical	1	6	junction_3	4.11285248404991	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTCTCGTTAATGAGA	NA	False	NA	NA	False	CATAAA	-27	NA	61198771	61215809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61198980_61199569_61199686_61201167_61201292_61201813_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888
ES.16683.6	chr18	+	183	1	Intergenic	novelGene_13907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAGCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	61211242	61211425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61211200_61211400
ES.16684.1	chr18	-	351	2	Intergenic	novelGene_13906	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAGACTCGGGCTGA	4018	False	NA	NA	False	AATAAA	-22	NA	61173007	61170193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61170404_61172866
ES.16685.1	chr18	+	6116	1	Antisense	novelGene_ENSMUSG00000024622.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGACAGATGGCTCAG	2827	False	NA	NA	False	NA	NA	NA	61277848	61283964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_61277800_61284000
ES.16686.1	chr18	+	175	1	Intergenic	novelGene_13908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61299971	61300146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61300000_61300100
ES.16687.1	chr18	-	5242	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	-134	-5	-134	5	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTCAATGCTGTGTC	5690	False	NA	0	True	AATAAA	-34	NA	61310256	61264343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.10	chr18	-	7832	20	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	70	junction_13	23.8979826221211	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5839	False	NA	-5	True	AATAAA	-29	NA	61310107	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.11	chr18	-	8115	22	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	51.3369996040348	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGCCTGTTCAATGC	5824	False	NA	-6	True	AATAAA	-28	NA	61310122	61264349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61271122_61271160_61272462_61272573_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290587_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.12	chr18	-	5118	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	5	-2	intron_retention	TRUE	non_canonical	0	0	junction_10	46.1111507896606	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAGCCTGTTCAATG	5829	False	NA	-7	True	AATAAA	-27	NA	61310117	61264350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283568_61285265_61285336_61288121_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.13	chr18	-	4976	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	37.2548990067078	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAGCCTGTTCAATG	5839	False	NA	-7	True	AATAAA	-27	NA	61310107	61264350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280428_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.17	chr18	-	5246	21	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	6	-2	intron_retention	FALSE	canonical	3	5	junction_15	43.1259492649147	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGAGCCTGTTCAATG	5830	False	NA	-7	True	AATAAA	-27	NA	61310116	61264350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61292229_61292285_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.18	chr18	-	5137	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_6	45.8643066669363	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGCCTGTTCAA	5828	False	NA	-9	True	AATAAA	-25	NA	61310118	61264352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274030_61274730_61274863_61279536_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.19	chr18	-	5100	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	37.4491655447755	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGCCTGTTCAA	5838	False	NA	-9	True	AATAAA	-25	NA	61310108	61264352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300781_61304279_61304455_61305222_61305359_61309649
ES.16687.20	chr18	-	5174	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	14	-4	intron_retention	FALSE	non_canonical	0	0	junction_17	35.8609193993434	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGCCTGTTCAA	5860	False	NA	-9	True	AATAAA	-25	NA	61310086	61264352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300781_61304279_61304455_61305222_61305359_61309649
ES.16687.22	chr18	-	5161	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	3	-7	intron_retention	FALSE	non_canonical	0	0	junction_19	35.9456345424487	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAGCAAGAGCCTGTT	5849	False	NA	-12	True	AATAAA	-22	NA	61310097	61264355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305353_61309649
ES.16687.23	chr18	-	4759	19	NIC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	-5	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	36.4043224268496	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGAAGCAAGAGCCTG	5836	False	NA	-14	True	AATAAA	-20	NA	61310110	61264357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.24	chr18	-	5219	20	NNC	ENSMUSG00000024622.9	novel	5131	20	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_10	35.9111708019336	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTTGATGAAGCAAGA	5841	False	NA	-19	True	AATAAA	-15	NA	61310105	61264362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285205_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.25	chr18	-	5104	22	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	45.6692238223417	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTTGATGAAGCAAGA	5845	False	NA	-19	True	AATAAA	-15	NA	61310101	61264362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304057_61304094_61304279_61304455_61305222_61305359_61309649
ES.16687.27	chr18	-	6701	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	5	junction_16	44.7833395360373	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTTTGATGAAGCAAG	5878	False	NA	-20	True	AATAAA	-14	NA	61310068	61264363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61292229_61292285_61295968_61296101_61298556_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.29	chr18	-	10598	20	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_6	45.4145570765568	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGTTTTGATGAAGCAA	5860	False	NA	-21	True	AATAAA	-13	NA	61310086	61264364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268125_61268660_61269298_61269433_61270474_61270695_61273862_61274043_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.3	chr18	-	5362	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-212	-19	-159	4	multi-exon	FALSE	canonical	3	101	junction_18	18.508813502905	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTTCAATGCTGTGT	5665	False	NA	-1	True	AATAAA	-33	NA	61310281	61264344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.30	chr18	-	4573	20	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	38.413697926204	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTTTTGATGAAGCA	5839	False	NA	-22	True	AATAAA	-12	NA	61310107	61264365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61304279_61304455_61305222_61305359_61309649
ES.16687.31	chr18	-	4628	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	52.2034481619749	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGTTTTGATGAAGCA	5839	False	NA	-22	True	AATAAA	-12	NA	61310107	61264365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61292229_61292285_61295968_61296101_61298556_61298656_61304279_61304455_61305222_61305359_61309649
ES.16687.32	chr18	-	5042	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.483696455926	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGGTTTTGATGAAGC	5838	False	NA	-23	True	AATAAA	-11	NA	61310108	61264366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270666_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.34	chr18	-	2954	11	ISM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	-50	18572	3	-571	5prime_fragment	FALSE	canonical	3	101	junction_9	14.3069912979634	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTCCTTCTGCTCT	5827	False	NA	NA	False	ATTAAA	-24	NA	61310119	61282935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.35	chr18	-	1445	1	ISM	ENSMUSG00000024622.9	ENSMUST00000237498.2	4179	3	6873	920	-2526	-920	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACACCGTTTTCTTTTG	NA	False	NA	NA	False	AATAGA	-17	NA	61303227	61301782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61301800_61303200
ES.16687.36	chr18	-	3026	1	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	1	-6233	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCTCCAGAGAACTGTG	5825	False	NA	NA	False	NA	NA	NA	61310121	61307095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61307100_61310100
ES.16687.4	chr18	-	8197	20	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	21	0	intron_retention	FALSE	canonical	3	70	junction_13	23.9458067738354	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5898	False	NA	-5	True	AATAAA	-29	NA	61310048	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.5	chr18	-	6180	21	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	37.497299902793	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5830	False	NA	-5	True	AATAAA	-29	NA	61310116	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61299184_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.6	chr18	-	5155	22	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	43.7465385737913	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5827	False	NA	-5	True	AATAAA	-29	NA	61310119	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61292229_61292285_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.8	chr18	-	10217	20	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	70	junction_14	23.4998673892645	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5845	False	NA	-5	True	AATAAA	-29	NA	61310101	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16687.9	chr18	-	4980	20	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	35.0786216275791	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5811	False	NA	-5	True	AATAAA	-29	NA	61310135	61264348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290646_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ES.16688.1	chr18	-	178	1	Intergenic	novelGene_13909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGTTAGGAGGCTAG	4499	False	NA	NA	False	NA	NA	NA	61311447	61311269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61311300_61311400
ES.16689.1	chr18	+	209	1	Intergenic	novelGene_13910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAACCTCTAGAGCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	61316412	61316621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61316400_61316600
ES.1669.1	chr1	-	8285	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	75	11	8	-11	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCCTTCAGTGTG	1774	False	NA	NA	False	AATAAA	-10	NA	156301826	156252105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.11	chr1	-	3145	17	NNC	ENSMUSG00000026600.13	novel	8371	16	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	31.1498394859428	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGACATGTACTCATATG	1759	False	NA	-7	True	AATAAA	-19	NA	156301841	156257363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285516_156285575_156285705_156285810_156294250_156294369_156301717
ES.1669.12	chr1	-	3074	16	NIC	ENSMUSG00000026600.13	novel	8371	16	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	21.1054495332367	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACATGTACTCATAT	1749	False	NA	-8	True	AATAAA	-18	NA	156301851	156257364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294227_156294369_156301717
ES.1669.14	chr1	-	2609	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	28	5734	-7	-466	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTTTAATTGTGCT	1727	False	NA	NA	False	AATACA	-17	NA	156301873	156257828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.15	chr1	-	2290	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	28	6053	-7	147	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTTGTTATGCATTCT	1727	False	NA	NA	False	NA	NA	NA	156301873	156258147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.16	chr1	-	709	4	FSM	ENSMUSG00000026600.13	ENSMUST00000187073.2	509	4	-90	-110	9	110	multi-exon	FALSE	canonical	2	51	junction_1	15.7973274814304	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGAGTTCTGTTCATT	1743	False	NA	NA	False	NA	NA	NA	156301857	156273870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.2	chr1	-	2762	1	ISM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	43835	3210	2077	2058	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAAATTGAATATCACA	NA	False	NA	NA	False	NA	NA	NA	156258066	156255304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156255300_156258100
ES.1669.3	chr1	-	4698	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	92	3581	1	1687	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTCTGGTGCTGTTTGT	1791	False	NA	NA	False	NA	NA	NA	156301809	156255675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.4	chr1	-	4440	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	-24	3955	-24	1313	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTCCAAGCTGGTTT	1675	False	NA	NA	False	AATAAA	-19	NA	156301925	156256049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.5	chr1	-	4297	15	NIC	ENSMUSG00000026600.13	novel	8371	16	NA	NA	-3	1309	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	20.8683922696112	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTGTGTTCCAAGCTG	1696	False	NA	NA	False	AATAAA	-15	NA	156301904	156256053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156301717
ES.1669.6	chr1	-	3791	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	-3	4583	-3	685	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTGTGTAATGGCA	1696	False	NA	NA	False	ATTAAA	-11	NA	156301904	156256677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.1669.7	chr1	-	3098	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	8	5265	8	3	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTACTCATATGTGAC	1707	False	NA	-3	True	AATAAA	-23	NA	156301893	156257359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ES.16690.1	chr18	-	9804	3	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	4963	-1	4708	1	3prime_fragment	FALSE	canonical	3	28	junction_2	1.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGCTGGAAGTTC	NA	False	NA	-1	True	AATAAA	-30	NA	61339721	61325989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61332731_61334752_61335476_61337381
ES.16690.2	chr18	-	7669	7	NNC	ENSMUSG00000034320.15	novel	7814	4	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0332963783729	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATTATTTTAGTGCTG	8692	False	NA	-8	True	AATAAA	-23	NA	61344707	61325996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61327055_61327100_61328080_61328154_61329195_61329235_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.3	chr18	-	7825	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	-25	14	-25	-14	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTGTGTAAATTATTT	8690	False	NA	-16	True	AATAAA	-15	NA	61344709	61326004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.4	chr18	-	7143	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	-13	684	-13	-684	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGAGTATGTATTTT	8702	False	NA	NA	False	ATTAAA	-22	NA	61344697	61326674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.5	chr18	-	6921	7	NNC	ENSMUSG00000034320.15	novel	7814	4	NA	NA	37	-694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0332963783729	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTATATTTTTGAG	8752	False	NA	NA	False	ATTAAA	-12	NA	61344647	61326684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61327055_61327100_61328080_61328154_61329195_61329235_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.6	chr18	-	4101	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	127	3586	-105	717	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGACTGCTGCTGGCTTG	8842	False	NA	NA	False	GATAAA	-35	NA	61344557	61329576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.7	chr18	-	3257	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	11	4546	11	-243	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGGAAGTCTTTGTC	8726	False	NA	NA	False	AAGAAA	-17	NA	61344673	61330536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ES.16690.8	chr18	-	2661	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	1	5152	1	-849	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTGGAACGTTTTCT	8716	False	NA	-3	True	AATAAA	-24	NA	61344683	61331142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ES.16691.1	chr18	-	977	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	-15	3	-15	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTGGACCTGCAGAGA	7408	False	NA	NA	False	NA	NA	NA	61393058	61392081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61392100_61393100
ES.16691.2	chr18	-	643	2	Genic_Genomic	ENSMUSG00000091957.4	novel	965	1	NA	NA	-15	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTGGACCTGCAGAGA	7408	False	NA	NA	False	NA	NA	NA	61393058	61392081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_61392324_61392657
ES.16691.3	chr18	-	690	2	Genic_Genomic	ENSMUSG00000091957.4	novel	965	1	NA	NA	-14	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTGGACCTGCAGAGA	7409	False	NA	NA	False	NA	NA	NA	61393057	61392081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_61392448_61392733
ES.16691.4	chr18	-	397	2	Genic_Genomic	ENSMUSG00000091957.4	novel	965	1	NA	NA	-15	-35	multi-exon	FALSE	non_canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTGAAAAAAAAAAAAAAAAA	7408	False	NA	NA	False	AATAAA	-14	NA	61393058	61392113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_61392328_61392875
ES.16692.1	chr18	+	1867	1	Intergenic	novelGene_13911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTCAGTCTAGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	61459741	61461608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61459700_61461600
ES.16693.1	chr18	-	10308	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	39	-6691	8	6691	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCCCAGAGGTGTCTT	3332	False	NA	-6	True	AATAAA	-42	NA	61533463	61424515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ES.16693.10	chr18	-	3307	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	21	328	-10	46	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAAAGCTGCTTCCGT	3314	False	NA	NA	False	NA	NA	NA	61533481	61431534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ES.16693.11	chr18	-	2891	1	Genic_Genomic	ENSMUSG00000033871.15	novel	NA	NA	NA	NA	10102	2424	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATCCAAACCAGTCAGA	8626	False	NA	NA	False	AATACA	-15	NA	61523369	61520478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_61520500_61523400
ES.16693.12	chr18	-	2609	1	FSM	ENSMUSG00000105200.3	ENSMUST00000198300.3	66	1	-1099	-1444	-1099	1444	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTGTATAGTATTTCA	4725	False	NA	NA	False	NA	NA	NA	61532070	61529461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61529500_61532100
ES.16693.2	chr18	-	5258	8	ISM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	89373	-2698	89342	2698	3prime_fragment	FALSE	canonical	3	43	junction_4	3.98978286964827	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATTCTTCCGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	61444129	61428508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477
ES.16693.3	chr18	-	4899	13	NNC	ENSMUSG00000033871.15	novel	3330	13	NA	NA	15	1119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	17.7920081934434	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACAGGCTTATTCCT	3308	False	NA	NA	False	AAGAAA	-18	NA	61533487	61430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61502216_61502356_61533360
ES.16693.4	chr18	-	3923	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	-267	0	-267	0	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTCTGATTACTGT	3026	False	NA	NA	False	AAAAAG	-37	NA	61533769	61431206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ES.16693.5	chr18	-	3597	11	NIC	ENSMUSG00000033871.15	novel	3656	12	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	14.8690954667727	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGGCTCTGATTACT	3313	False	NA	NA	False	AAAAAG	-35	NA	61533482	61431208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ES.16693.6	chr18	-	5424	2	ISM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	96062	8	96031	-8	intron_retention	FALSE	canonical	3	57	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTATTTATGGCTCTG	NA	False	NA	NA	False	AAAAAG	-29	NA	61437440	61431214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61431855_61432656
ES.16693.8	chr18	-	3480	11	NIC	ENSMUSG00000033871.15	novel	3656	12	NA	NA	1	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	14.6982992213385	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAC	3325	False	NA	NA	False	AAAAAG	-10	NA	61533470	61431233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61448807_61449021_61456205_61456380_61533360
ES.16693.9	chr18	-	4818	11	ISM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	75792	27	75761	-27	3prime_fragment	FALSE	canonical	3	29	junction_9	7.36274405367999	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAC	NA	False	NA	NA	False	AAAAAG	-10	NA	61457710	61431233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205
ES.16694.1	chr18	-	2200	1	ISM	ENSMUSG00000045094.9	ENSMUST00000171629.3	5429	13	42737	1	15422	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGTTGGCTAGTATACCA	8464	False	NA	NA	False	AATAAA	-18	NA	61626928	61624728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61624700_61626900
ES.16695.1	chr18	+	156	1	Intergenic	novelGene_13912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	1031	False	NA	NA	False	NA	NA	NA	61640648	61640804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61640600_61640800
ES.16696.1	chr18	-	152	1	Intergenic	novelGene_13913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATTAAAAAAACAAA	5531	False	NA	NA	False	NA	NA	NA	61646925	61646773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61646800_61646900
ES.16697.1	chr18	-	227	1	Intergenic	novelGene_13914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTCTTCCAACTGTGA	NA	False	NA	NA	False	AAGAAA	-18	NA	61670748	61670521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61670500_61670700
ES.16698.10	chr18	+	4387	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-125	-179	-125	179	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACGGTGTAGTCTAAGCC	303	False	NA	-56	True	GATAAA	-17	NA	61688219	61723311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.101	chr18	+	3780	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-4	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	639.612038660937	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	478	False	NA	-18	True	NA	NA	NA	61688394	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496_61722027_61722284
ES.16698.102	chr18	+	3473	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-15	-1199	-4	-680	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTCATAAAGCTA	478	False	NA	NA	False	AATAAA	-22	NA	61688394	61722452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.104	chr18	+	4001	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	784.582565743807	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	478	False	NA	13	True	AATAAA	-16	NA	61688394	61723132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708513_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713524_61720496
ES.16698.105	chr18	+	3859	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	880.401467400897	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	478	False	NA	13	True	AATAAA	-16	NA	61688394	61723132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722278
ES.16698.106	chr18	+	3147	10	ISM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-365	5414	-4	1	5prime_fragment	FALSE	canonical	3	229	junction_5	707.921858699596	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTATTGTAACTTATT	478	False	NA	26	True	ATTAAA	-17	NA	61688394	61715188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.107	chr18	+	3490	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-2	251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTCAACTAGAATGAGCC	480	False	NA	16	True	AATAAA	-14	NA	61688396	61723383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721493_61722284
ES.16698.108	chr18	+	2132	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	774.205889928513	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTATACGATCTGGG	482	False	NA	2	True	GATAAA	-13	NA	61688398	61721286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688753_61688803_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.109	chr18	+	2226	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	15	82	0	40	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGATCTGGGATTTTGT	482	False	NA	9	True	GATAAA	-20	NA	61688398	61721293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.11	chr18	+	3429	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-160	-946	-121	-811	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCTGTCACCAAGAGAT	307	False	NA	NA	False	NA	NA	NA	61688223	61722321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.110	chr18	+	9563	10	NIC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	0	-680	intron_retention	FALSE	canonical	3	26	junction_9	604.985970656641	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTCTCATAAAGCTA	482	False	NA	NA	False	AATAAA	-22	NA	61688398	61722452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.111	chr18	+	3090	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	15	-782	0	782	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGGAGCCTATTGT	482	False	NA	6	True	ATTAAA	-20	NA	61688398	61722157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.112	chr18	+	1745	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	1	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	613.012254927549	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGCTCTTATGACCC	483	False	NA	-14	True	AATATA	-39	NA	61688399	61723166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61722813
ES.16698.113	chr18	+	3747	11	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	483	False	NA	13	True	AATAAA	-16	NA	61688399	61723132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722001_61722281
ES.16698.115	chr18	+	3628	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	483	False	NA	15	True	AATAAA	-18	NA	61688399	61723134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688419_61688820_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.116	chr18	+	4295	10	NNC	ENSMUSG00000024576.15	novel	1860	10	NA	NA	1	252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	613.012254927549	1768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAACTAGAATGAGCCA	483	False	NA	17	True	AATAAA	-15	NA	61688399	61723384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713547_61720505
ES.16698.117	chr18	+	3526	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	483	False	NA	-18	True	NA	NA	NA	61688399	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721812_61722282
ES.16698.118	chr18	+	3093	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	-677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCTCATAAAGCTATTT	483	False	NA	NA	False	AATAAA	-25	NA	61688399	61722455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722278
ES.16698.119	chr18	+	4143	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	837.798782524778	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAAGGGAGAGGCTGGT	483	False	NA	8	True	AATAAA	-11	NA	61688399	61723127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702620_61704934_61705029_61708480_61708621_61709577_61709657_61710248_61710328_61711737_61711845_61713409_61713559_61720496
ES.16698.12	chr18	+	2225	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-119	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	774.205889928513	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAAAACTGTTTCT	309	False	NA	5	True	NA	NA	NA	61688225	61721353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688635_61688832_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.120	chr18	+	3968	9	NIC	ENSMUSG00000024576.15	novel	2323	10	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	45	junction_3	695.760150842228	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTGGTTGTCTCTC	483	False	NA	16	True	AATAAA	-19	NA	61688399	61723135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.122	chr18	+	3365	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	2	45608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCCCCCCCCAAAAAAAA	484	False	NA	NA	False	NA	NA	NA	61688400	61768740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722453_61768722
ES.16698.125	chr18	+	3740	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	484	False	NA	15	True	AATAAA	-18	NA	61688400	61723134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721991_61722279
ES.16698.126	chr18	+	4288	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	2	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	880.401467400897	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	484	False	NA	24	True	AATAAA	-22	NA	61688400	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688715_61688796_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.127	chr18	+	4022	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-3	255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAGAATGAGCCATGA	486	False	NA	20	True	AATAAA	-18	NA	61688402	61723387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722027_61722284
ES.16698.128	chr18	+	10154	9	NIC	ENSMUSG00000024576.15	novel	2323	10	NA	NA	1	254	intron_retention	FALSE	canonical	3	816	junction_8	385.787749287092	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACTAGAATGAGCCATG	494	False	NA	19	True	AATAAA	-17	NA	61688410	61723386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.129	chr18	+	3097	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	14	-686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	639.612038660937	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGGAAATCAGTCTCATA	507	False	NA	NA	False	AATAAA	-16	NA	61688423	61722446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496_61722027_61722283
ES.16698.13	chr18	+	2504	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-157	-24	-118	24	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGCCTTGGCTGACT	310	False	NA	51	True	ATTAAA	-44	NA	61688226	61721399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.132	chr18	+	3797	10	NNC	ENSMUSG00000024576.15	novel	526	6	NA	NA	275	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	670.604002668536	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGGAGAGGCTGGTT	1118	False	NA	9	True	AATAAA	-12	NA	61689034	61723128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61689317_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.133	chr18	+	3414	11	NNC	ENSMUSG00000024576.15	novel	526	6	NA	NA	337	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	890.935738423373	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	1180	False	NA	-18	True	NA	NA	NA	61689096	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61689317_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722278
ES.16698.134	chr18	+	1928	10	NNC	ENSMUSG00000024576.15	novel	526	6	NA	NA	380	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	670.604002668536	1624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTCTGTAAGGAAGTG	1223	False	NA	16	True	ATTAAA	-9	NA	61689139	61721364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61689317_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.135	chr18	+	1740	10	NNC	ENSMUSG00000024576.15	novel	526	6	NA	NA	702	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	810.141338072759	1624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAAAACTGTTTCT	1545	False	NA	5	True	NA	NA	NA	61689461	61721353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61689498_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.136	chr18	+	1728	9	ISM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	1227	1757	812	0	3prime_fragment	FALSE	canonical	0	0	junction_8	648.901078266171	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	1655	False	NA	27	True	ATTAAA	-20	NA	61689571	61721375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.137	chr18	+	3454	9	ISM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	1227	31	812	-31	3prime_fragment	FALSE	canonical	0	0	junction_8	648.901078266171	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	1655	False	NA	-18	True	NA	NA	NA	61689571	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.139	chr18	+	3698	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	984	2132	mono-exon	FALSE	NA	NA	NA	NA	NA	1423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCTGTTGAAAATGTT	1827	False	NA	NA	False	AATAAA	-20	NA	61689743	61693441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_61689700_61693400
ES.16698.14	chr18	+	3380	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-105	808	-105	-808	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCACCAAGAGATGTG	323	False	NA	NA	False	NA	NA	NA	61688239	61722324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.140	chr18	+	4712	7	ISM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	14705	-2528	-5123	-2	3prime_fragment	FALSE	canonical	0	0	junction_6	899.62418079255	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGAGAGGCTGGTTGT	NA	False	NA	11	True	AATAAA	-14	NA	61703464	61723130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.141	chr18	+	5682	1	NIC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	-5016	-5934	mono-exon	FALSE	NA	NA	NA	NA	NA	1451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCTGTACATCTCTG	NA	False	NA	NA	False	AATACA	-2	NA	61703571	61709253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61703600_61709300
ES.16698.142	chr18	+	3158	6	ISM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	20094	-1726	-110	-31	3prime_fragment	FALSE	canonical	3	816	junction_5	484.920364596085	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	61708477	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.143	chr18	+	4969	7	NNC	ENSMUSG00000024576.15	novel	526	6	NA	NA	-9	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	944.914708085103	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCGGGAAATCAGTCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	61708578	61722444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61717167_61717476_61718235
ES.16698.144	chr18	+	1190	4	ISM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	21863	22	1659	-22	3prime_fragment	FALSE	canonical	3	816	junction_3	576.451404909575	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAAAACTGTTTCT	NA	False	NA	5	True	NA	NA	NA	61710246	61721353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.145	chr18	+	3188	4	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	1659	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	958.881408494062	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAATGAGCCATGAAG	NA	False	NA	22	True	AATAAA	-20	NA	61710246	61723389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61710324_61711737_61711845_61713409_61713521_61720496
ES.16698.146	chr18	+	8116	2	FSM	ENSMUSG00000024576.15	ENSMUST00000170482.2	2895	2	-1399	-3822	-1399	259	multi-exon	FALSE	canonical	3	26	junction_1	0	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	NA	False	NA	24	True	AATAAA	-22	NA	61714515	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61717476_61718235
ES.16698.147	chr18	+	8655	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	-1178	259	mono-exon	FALSE	NA	NA	NA	NA	NA	1731	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	NA	False	NA	24	True	AATAAA	-22	NA	61714736	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_61714700_61723400
ES.16698.148	chr18	+	5915	2	FSM	ENSMUSG00000024576.15	ENSMUST00000170482.2	2895	2	512	-3532	512	-31	multi-exon	FALSE	canonical	3	26	junction_1	0	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	61716426	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61717476_61718235
ES.16698.149	chr18	+	6227	2	NNC	ENSMUSG00000024576.15	novel	2895	2	NA	NA	615	251	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTCAACTAGAATGAGCC	NA	False	NA	16	True	AATAAA	-14	NA	61716529	61723383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61721652_61722278
ES.16698.150	chr18	+	3339	3	NNC	ENSMUSG00000024576.15	novel	2895	2	NA	NA	1279	62	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_1	70.5	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACAAGGCTTATCTTTG	NA	False	NA	14	True	NA	NA	NA	61717193	61723194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61717476_61718235_61718595_61720496
ES.16698.151	chr18	+	3300	1	NIC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	2007	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	1533	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTAGTTACCGTCTTA	NA	False	NA	-63	True	ATTAAA	-20	NA	61717921	61721221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61717900_61721200
ES.16698.152	chr18	+	4258	2	NNC	ENSMUSG00000024576.15	novel	2895	2	NA	NA	2959	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAATGAGCCATGAAG	NA	False	NA	22	True	AATAAA	-20	NA	61718873	61723389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61722027_61722284
ES.16698.153	chr18	+	3337	1	NIC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	3070	-811	mono-exon	FALSE	NA	NA	NA	NA	NA	1643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCTGTCACCAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	61718984	61722321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61719000_61722300
ES.16698.154	chr18	+	3055	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	6947	2784	mono-exon	FALSE	NA	NA	NA	NA	NA	766	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTATTCCCGGGTATAT	NA	False	NA	NA	False	TATAAA	-21	NA	61722861	61725916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_61722900_61725900
ES.16698.155	chr18	+	2151	1	Intergenic	novelGene_13915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTATTACCCTCATTT	NA	False	NA	NA	False	AATACA	-12	NA	61723974	61726125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61724000_61726100
ES.16698.156	chr18	+	196	1	Intergenic	novelGene_13916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCTGTCTTCAATCT	290	False	NA	NA	False	ATTAAA	-22	NA	61726712	61726908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61726700_61726900
ES.16698.157	chr18	+	136	1	Intergenic	novelGene_13917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAACAACAA	1936	False	NA	NA	False	NA	NA	NA	61728358	61728494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61728400_61728500
ES.16698.158	chr18	+	165	1	Intergenic	novelGene_13918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	61763030	61763195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61763000_61763200
ES.16698.16	chr18	+	3331	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-168	-904	-103	782	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGGAGCCTATTGT	325	False	NA	6	True	ATTAAA	-20	NA	61688241	61722157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.17	chr18	+	4303	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-163	-1881	-98	2	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	330	False	NA	15	True	AATAAA	-18	NA	61688246	61723134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.18	chr18	+	3369	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-92	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	639.612038660937	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCAGGATATTTTTTCA	336	False	NA	NA	False	NA	NA	NA	61688252	61722547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496_61722021_61722277
ES.16698.19	chr18	+	2501	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-506	-773	-91	0	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	337	False	NA	27	True	ATTAAA	-20	NA	61688253	61721375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.2	chr18	+	2661	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-287	1709	-287	48	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGTGTGTGTGTGTGTG	141	False	NA	75	True	TTTAAA	-27	NA	61688057	61721423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.20	chr18	+	4515	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-504	-2789	-89	259	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	339	False	NA	24	True	AATAAA	-22	NA	61688255	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.22	chr18	+	4299	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-489	-2588	-74	58	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACATACAAGGCTTATC	354	False	NA	10	True	NA	NA	NA	61688270	61723190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.25	chr18	+	3452	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-125	-1068	-60	-811	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCTGTCACCAAGAGAT	368	False	NA	NA	False	NA	NA	NA	61688284	61722321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.26	chr18	+	1615	10	NIC	ENSMUSG00000024576.15	novel	1484	10	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_9	601.591408035572	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGTAACTTATTC	379	False	NA	27	True	ATTAAA	-18	NA	61688295	61715189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61715106
ES.16698.28	chr18	+	3153	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	-94	145	-40	1	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTATTGTAACTTATT	388	False	NA	26	True	ATTAAA	-17	NA	61688304	61715188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.29	chr18	+	1909	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	-64	1359	-10	-1213	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGACTTACTTTCAGAC	418	False	NA	NA	False	AATAAA	-19	NA	61688334	61713974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.3	chr18	+	4617	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-247	-287	-247	287	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCATCAAAACATCTTTA	181	False	NA	52	True	NA	NA	NA	61688097	61723419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.30	chr18	+	2185	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-10	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	769.079293701241	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTATAGTTTGT	418	False	NA	NA	False	ATTAAA	-17	NA	61688334	61718655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61717167_61717476_61718235
ES.16698.31	chr18	+	3305	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-10	278	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	767.882308690596	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGCCATTAAAGGTAGC	418	False	NA	NA	False	AGTAAA	-13	NA	61688334	61719847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61717275_61717476_61718235
ES.16698.32	chr18	+	8550	10	NIC	ENSMUSG00000024576.15	novel	2323	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	26	junction_9	604.985970656641	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	418	False	NA	27	True	ATTAAA	-20	NA	61688334	61721375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.33	chr18	+	3303	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	418	False	NA	15	True	AATAAA	-18	NA	61688334	61723134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721488_61722279
ES.16698.35	chr18	+	1536	10	FSM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	-50	-2	-6	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGTAACTTATTC	422	False	NA	27	True	ATTAAA	-18	NA	61688338	61715189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ES.16698.36	chr18	+	4167	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-5	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	880.401467400897	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAACTAGAATGAGCCAT	423	False	NA	18	True	AATAAA	-16	NA	61688339	61723385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722278
ES.16698.37	chr18	+	2249	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-5	1839	-5	40	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGATCTGGGATTTTGT	423	False	NA	9	True	GATAAA	-20	NA	61688339	61721293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.38	chr18	+	3555	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-420	-1913	-5	-617	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTTCCAAGTTGAAC	423	False	NA	NA	False	AATAAA	-17	NA	61688339	61722515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.39	chr18	+	9303	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	-58	-6041	-4	-1	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAGTGAAATTTTTTT	424	False	NA	26	True	ATTAAA	-19	NA	61688340	61721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.4	chr18	+	3723	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-226	-1174	-187	-583	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGATATTTTTTCAGT	241	False	NA	NA	False	NA	NA	NA	61688157	61722549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.40	chr18	+	4032	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	-4	-31	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_9	586.17077105525	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	424	False	NA	-18	True	NA	NA	NA	61688340	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713499_61720496
ES.16698.42	chr18	+	4468	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-69	-2140	-4	261	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAGCCATGAAGATTG	424	False	NA	26	True	AATAAA	-24	NA	61688340	61723393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.43	chr18	+	7013	10	NIC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	-1	278	intron_retention	FALSE	canonical	3	26	junction_9	604.985970656641	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGCCATTAAAGGTAGC	427	False	NA	NA	False	AGTAAA	-13	NA	61688343	61719847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.44	chr18	+	1615	11	NIC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	819.69914602859	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGTAACTTATTC	427	False	NA	27	True	ATTAAA	-18	NA	61688343	61715189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ES.16698.45	chr18	+	3329	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-1	-677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCTCATAAAGCTATTT	427	False	NA	NA	False	AATAAA	-25	NA	61688343	61722455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722092_61722169
ES.16698.47	chr18	+	4117	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	0	-34	0	34	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGCTCTTATGACCC	428	False	NA	-14	True	AATATA	-39	NA	61688344	61723166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.48	chr18	+	4770	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	0	-687	0	687	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGTTTAGGATTGTTT	428	False	NA	NA	False	AATACA	-13	NA	61688344	61723819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.49	chr18	+	4119	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	1	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	639.612038660937	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	429	False	NA	24	True	AATAAA	-22	NA	61688345	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496_61722021_61722278
ES.16698.5	chr18	+	3640	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	-144	587	-144	-587	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCAGGATATTTTTT	284	False	NA	NA	False	NA	NA	NA	61688200	61722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.50	chr18	+	2256	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-414	-620	1	-31	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAGTTACCGTCTTAC	429	False	NA	-62	True	ATTAAA	-21	NA	61688345	61721222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.51	chr18	+	3794	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	429	False	NA	-18	True	NA	NA	NA	61688345	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722277
ES.16698.52	chr18	+	3550	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAATGAGCCATGAAG	429	False	NA	22	True	AATAAA	-20	NA	61688345	61723389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721488_61722276
ES.16698.53	chr18	+	2757	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	1	1325	1	432	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTGCTACAGCTGTGGG	429	False	NA	NA	False	NA	NA	NA	61688345	61721807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.55	chr18	+	2443	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	-62	-122	3	0	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	431	False	NA	27	True	ATTAAA	-20	NA	61688347	61721375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.56	chr18	+	4491	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	904.831686097083	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGGTTGTCTCTCCCA	433	False	NA	19	True	AATAAA	-22	NA	61688349	61723138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61707977_61708301_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.57	chr18	+	3814	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGAGGCTGGTTGTC	437	False	NA	12	True	AATAAA	-15	NA	61688353	61723131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722027_61722285
ES.16698.58	chr18	+	4093	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	10	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	854.816705498904	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	438	False	NA	-18	True	NA	NA	NA	61688354	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708513_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.59	chr18	+	3392	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	10	-686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	880.401467400897	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGGAAATCAGTCTCATA	438	False	NA	NA	False	AATAAA	-16	NA	61688354	61722446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688713_61688791_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.6	chr18	+	4521	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-180	-2018	-141	261	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAGCCATGAAGATTG	287	False	NA	26	True	AATAAA	-24	NA	61688203	61723393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.60	chr18	+	3855	2	FSM	ENSMUSG00000024576.15	ENSMUST00000165381.2	2275	2	-51	-1529	10	1529	multi-exon	FALSE	canonical	3	1813	junction_1	0	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTGTTTTTGATTGCT	438	False	NA	NA	False	AATAAA	-11	NA	61688354	61692838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573
ES.16698.62	chr18	+	1668	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	10	2405	10	125	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCGGTTTTCTATTGC	438	False	NA	NA	False	NA	NA	NA	61688354	61720727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.63	chr18	+	2409	12	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	10	39581	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	880.401467400897	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAATTGTTGC	438	False	NA	NA	False	NA	NA	NA	61688354	61762713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721368_61762696
ES.16698.66	chr18	+	7761	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	-43	-4514	11	278	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGCCATTAAAGGTAGC	439	False	NA	NA	False	AGTAAA	-13	NA	61688355	61719847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.67	chr18	+	4033	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	12	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	810.141338072759	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	440	False	NA	-18	True	NA	NA	NA	61688356	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689580_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.69	chr18	+	4005	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	440	False	NA	15	True	AATAAA	-18	NA	61688356	61723134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688734_61688801_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.7	chr18	+	11266	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	-195	-7867	-141	68	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTATCTTTGCTGTGA	287	False	NA	20	True	NA	NA	NA	61688203	61723200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ES.16698.70	chr18	+	3096	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	12	975	12	782	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGGAGCCTATTGT	440	False	NA	6	True	ATTAAA	-20	NA	61688356	61722157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.72	chr18	+	3859	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	12	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAATGAGCCATGAAG	440	False	NA	22	True	AATAAA	-20	NA	61688356	61723389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721812_61722280
ES.16698.73	chr18	+	2282	11	NNC	ENSMUSG00000024576.15	novel	2323	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	639.612038660937	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	440	False	NA	27	True	ATTAAA	-20	NA	61688356	61721375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688734_61688801_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.74	chr18	+	3180	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-403	-1555	12	782	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGGAGCCTATTGT	440	False	NA	6	True	ATTAAA	-20	NA	61688356	61722157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.75	chr18	+	2216	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	810.141338072759	1624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAGTGAAATTTTTTT	441	False	NA	26	True	ATTAAA	-19	NA	61688357	61721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688879_61689603_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.77	chr18	+	3937	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-16	-1598	-16	-159	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGCTGGCTCAGCTGA	451	False	NA	NA	False	ACTAAA	-11	NA	61688367	61722973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.78	chr18	+	8509	11	NIC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-6	40	intron_retention	FALSE	canonical	3	26	junction_10	815.252138911638	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACGATCTGGGATTTTGT	461	False	NA	9	True	GATAAA	-20	NA	61688377	61721293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.79	chr18	+	875	3	NNC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	-5	-281	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	887.5	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCACTGGTCATTT	462	False	NA	NA	False	AATAAA	-14	NA	61688378	61691028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61690826
ES.16698.8	chr18	+	5949	10	NIC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	-128	-46	intron_retention	FALSE	canonical	3	26	junction_9	604.985970656641	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCTTATAGTTTGTA	300	False	NA	NA	False	ATTAAA	-18	NA	61688216	61718656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.81	chr18	+	3879	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-1	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	639.612038660937	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGACATACAAGGCTTA	466	False	NA	8	True	NA	NA	NA	61688382	61723188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496_61722021_61722278
ES.16698.84	chr18	+	2262	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	812.780276444857	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAAAACTGTTTCT	468	False	NA	5	True	NA	NA	NA	61688384	61721353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702626_61708474_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.85	chr18	+	4785	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	767.882308690596	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGAAATTTTTTTAAA	468	False	NA	29	True	ATTAAA	-22	NA	61688384	61721377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61717275_61717476_61718235
ES.16698.86	chr18	+	4045	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	1	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	774.205889928513	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATGAGCCATGAAGAT	468	False	NA	24	True	AATAAA	-22	NA	61688384	61723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61722021_61722277
ES.16698.88	chr18	+	4324	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	2	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	890.935738423373	1768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGAATGAGCCATGAAGA	469	False	NA	23	True	AATAAA	-21	NA	61688385	61723390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689473_61689498_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.9	chr18	+	4286	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	-167	-1796	-128	39	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCTTATGACCCACAAG	300	False	NA	-9	True	AATATA	-44	NA	61688216	61723171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.90	chr18	+	1605	11	NIC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_10	813.385910868881	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTATTGTAACTTAT	471	False	NA	25	True	ATTAAA	-16	NA	61688387	61715187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61715106
ES.16698.91	chr18	+	2254	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_9	586.17077105525	1624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAGGAAGTGAAATTT	471	False	NA	22	True	ATTAAA	-15	NA	61688387	61721370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713499_61720496
ES.16698.93	chr18	+	3054	10	NNC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	-1	782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	809.257608270203	1748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGGAGCCTATTGT	471	False	NA	6	True	ATTAAA	-20	NA	61688387	61722157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702545_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16698.95	chr18	+	1722	10	NNC	ENSMUSG00000024576.15	novel	2323	10	NA	NA	5	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	613.012254927549	1767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	477	False	NA	-18	True	NA	NA	NA	61688393	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61722813
ES.16698.96	chr18	+	3964	11	NNC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	5	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	639.612038660937	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAATAAAAAAA	477	False	NA	-18	True	NA	NA	NA	61688393	61723101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688486_61688560_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ES.16698.98	chr18	+	5855	11	NIC	ENSMUSG00000024576.15	novel	2259	11	NA	NA	-4	-46	intron_retention	FALSE	canonical	3	26	junction_10	815.252138911638	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCTTATAGTTTGTA	478	False	NA	NA	False	ATTAAA	-18	NA	61688394	61718656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61717476_61718235
ES.16698.99	chr18	+	3949	11	NNC	ENSMUSG00000024576.15	novel	1222	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	774.205889928513	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGAGAGGCTGGTTGT	478	False	NA	11	True	AATAAA	-14	NA	61688394	61723130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61688715_61688796_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ES.16699.1	chr18	-	2790	11	Antisense	novelGene_ENSMUSG00000024576.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAAATGCCCCCAGTCC	4545	False	NA	NA	False	NA	NA	NA	61721807	61688397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_61688943_61689571_61689680_61701333_61701459_61702531_61702632_61704942_61705031_61708481_61708619_61709575_61709655_61710246_61710322_61711735_61711837_61713401_61713521_61720494
ES.16699.2	chr18	-	9671	4	Antisense	novelGene_ENSMUSG00000024576.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGAATGCTGGGCAGT	4545	False	NA	NA	False	NA	NA	NA	61721807	61709219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_61709655_61710246_61711837_61713401_61717474_61718233
ES.16699.3	chr18	-	7852	1	Antisense	novelGene_ENSMUSG00000024576.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TATTAAAAAAAAAAAAAAAA	4546	False	NA	NA	False	NA	NA	NA	61721806	61713954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_61714000_61721800
ES.167.1	chr1	-	3621	20	Fusion	ENSMUSG00000041859.11_ENSMUSG00000041872.10	novel	3031	17	NA	NA	1	0	multi-exon	TRUE	canonical	0	0	junction_2	947.565318720033	1903	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAAGTCTGTGCTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	20890483	20847369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_20848229_20849514_20849736_20854396_20854484_20873715_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.11	chr1	-	4177	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	21	5	intron_retention	FALSE	canonical	3	2257	junction_10	169.057965075756	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATGTGTGTGAGG	NA	False	NA	-7	True	AATACA	-14	NA	20890515	20873186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.13	chr1	-	3551	17	NNC	ENSMUSG00000041859.11	novel	3431	16	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_1	853.877991870033	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTGTGTGTATGTGT	NA	False	NA	-13	True	AATACA	-8	NA	20890490	20873192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20874076_20874187_20875040_20875132_20875486_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.14	chr1	-	3273	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	635.613553854659	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTGTGTGTATGTGT	NA	False	NA	-13	True	AATACA	-8	NA	20890471	20873192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20874187_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.17	chr1	-	4158	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	2257	junction_9	191.841306122258	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTCTGTGTGTA	NA	False	NA	-18	True	AATACA	-3	NA	20890473	20873197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875564_20876020_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.19	chr1	-	3301	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	13	-15	intron_retention	FALSE	canonical	3	2257	junction_10	185.766328727487	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACATTTATTTA	NA	False	NA	6	True	AGTAAA	-42	NA	20890471	20873211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.2	chr1	-	5381	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	53	-2403	1	2403	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTGAGCCTAATCTTG	NA	False	NA	NA	False	NA	NA	NA	20890483	20870788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.20	chr1	-	3494	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	1	-15	intron_retention	FALSE	canonical	3	2257	junction_10	182.608648117626	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACATTTATTTA	NA	False	NA	6	True	AGTAAA	-42	NA	20890483	20873211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.21	chr1	-	2936	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	646.520772578113	1901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTGTGCTTTAAAAAAA	NA	False	NA	-7	True	AGTAAA	-29	NA	20890480	20873224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882914_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.22	chr1	-	6669	13	NIC	ENSMUSG00000041859.11	novel	3431	16	NA	NA	-18	4	intron_retention	FALSE	canonical	3	2257	junction_7	185.139286904632	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTTGTGCTTTAAAAAA	NA	False	NA	-8	True	AGTAAA	-28	NA	20890502	20873225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.23	chr1	-	4214	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	2274	junction_6	169.312255906063	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCTTTGTGCTTTAA	NA	False	NA	-12	True	AGTAAA	-24	NA	20890473	20873229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.25	chr1	-	4457	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2257	junction_9	172.13983399835	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATGCTTTGTGCTTTA	NA	False	NA	-13	True	AGTAAA	-23	NA	20890484	20873230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.26	chr1	-	2947	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	646.520772578113	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATGCTTTGTGCTTTA	NA	False	NA	-13	True	AGTAAA	-23	NA	20890483	20873230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883176_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.27	chr1	-	3134	18	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	845.895177027882	1901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATGCTTTGTGCTTTA	NA	False	NA	-13	True	AGTAAA	-23	NA	20890483	20873230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879344_20879540_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.29	chr1	-	4647	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	13	-2	intron_retention	FALSE	canonical	3	2257	junction_11	187.038985835099	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCATGCTTTGTGCTTT	NA	False	NA	-14	True	AGTAAA	-22	NA	20890471	20873231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.3	chr1	-	3638	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	33	-640	-19	640	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGATTCTATTTTT	NA	False	NA	NA	False	NA	NA	NA	20890503	20872551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.31	chr1	-	2973	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	635.847453698605	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCATGCTTTGTGCTTT	NA	False	NA	-14	True	AGTAAA	-22	NA	20890449	20873231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873948_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.32	chr1	-	4114	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	2257	junction_9	182.091211165376	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCATGCTTTGTGCTTT	NA	False	NA	-14	True	AGTAAA	-22	NA	20890483	20873231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20877107_20878944_20879096_20879819_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.33	chr1	-	4630	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	41	-2	intron_retention	FALSE	canonical	3	2257	junction_10	187.135910206697	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCATGCTTTGTGCTTT	NA	False	NA	-14	True	AGTAAA	-22	NA	20890443	20873231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.34	chr1	-	4807	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	21	-3	intron_retention	FALSE	canonical	3	2257	junction_10	176.503245170041	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCATGCTTTGTGCTT	NA	False	NA	-15	True	AGTAAA	-21	NA	20890515	20873232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.37	chr1	-	5500	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	14	-7	intron_retention	FALSE	canonical	3	2257	junction_10	180.790173224913	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACTTCATGCTTTGT	NA	False	NA	-19	True	AGTAAA	-17	NA	20890470	20873236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016
ES.167.39	chr1	-	2457	8	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	-6132	-7	intron_retention	FALSE	canonical	3	2274	junction_5	204.438504300967	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACTTCATGCTTTGT	NA	False	NA	-19	True	AGTAAA	-17	NA	20882296	20873236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188
ES.167.4	chr1	-	3540	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	-92	-417	-92	417	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTTGTCCTTCCTCAT	NA	False	NA	7	True	AATAAA	-29	NA	20890628	20872774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.40	chr1	-	6263	14	NIC	ENSMUSG00000041859.11	novel	3431	16	NA	NA	22	-7	intron_retention	FALSE	canonical	3	2257	junction_8	181.00063748294	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACTTCATGCTTTGT	NA	False	NA	-19	True	AGTAAA	-17	NA	20890462	20873236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20875132_20875486_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.41	chr1	-	2923	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	638.783044032753	1901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGACTTCATGCTTTG	NA	False	NA	-20	True	AGTAAA	-16	NA	20890483	20873237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878953_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.42	chr1	-	2889	17	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	36	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	644.891742368438	1901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGACTTCATGCTTTG	NA	False	NA	-20	True	AGTAAA	-16	NA	20890448	20873237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888024_20888130_20890354
ES.167.44	chr1	-	1621	9	NNC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	-6146	-9	at_least_one_novel_splicesite	FALSE	canonical	1	72	junction_1	825.417129395798	1900	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGACTTCATGCTTT	NA	False	NA	-21	True	AGTAAA	-15	NA	20882310	20873238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_20873872_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188
ES.167.45	chr1	-	4275	15	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	0	-9	intron_retention	FALSE	canonical	3	2257	junction_10	162.826124865685	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGACTTCATGCTTT	NA	False	NA	-21	True	AGTAAA	-15	NA	20890484	20873238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.50	chr1	-	2715	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	63	253	11	-56	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTGTCCTGCGTTTG	NA	False	NA	NA	False	NA	NA	NA	20890473	20873444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.8	chr1	-	3215	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	62	-246	10	246	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTTGTCAAATTTTA	NA	False	NA	NA	False	AAAACA	-29	NA	20890474	20872945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.167.9	chr1	-	3162	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	-121	-10	-121	10	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGTGTGAGGGTTGG	NA	False	NA	-2	True	AATACA	-19	NA	20890657	20873181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ES.1670.1	chr1	-	178	1	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGTCTTTAAGTGAAAA	1322	False	NA	NA	False	NA	NA	NA	156339634	156339456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156339500_156339600
ES.16700.1	chr18	-	164	1	Intergenic	novelGene_13919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61765127	61764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61765000_61765100
ES.16701.1	chr18	+	746	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	-170	12	-59	-12	multi-exon	FALSE	canonical	3	52	junction_1	11.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTACGAATGA	NA	False	NA	5	True	AATAAA	-5	NA	61772553	61780531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61772840_61778233_61778437_61780274
ES.16701.2	chr18	+	669	3	NNC	ENSMUSG00000098098.8	novel	588	3	NA	NA	-30	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTACGAATGA	NA	False	NA	5	True	AATAAA	-5	NA	61772693	61780531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_61772840_61778233_61778500_61780274
ES.16701.3	chr18	+	4968	2	ISM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	1002	12	1002	-12	3prime_fragment	FALSE	canonical	3	75	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTACGAATGA	NA	False	NA	5	True	AATAAA	-5	NA	61773725	61780531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_61778437_61780274
ES.16701.4	chr18	+	2489	1	NIC	ENSMUSG00000098098.8	novel	588	3	NA	NA	5319	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTACGAATGA	NA	False	NA	5	True	AATAAA	-5	NA	61778042	61780531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_61778000_61780500
ES.16702.1	chr18	-	185	1	Intergenic	novelGene_13920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAAGAACTTATGCCAA	NA	False	NA	NA	False	NA	NA	NA	61773310	61773125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61773100_61773300
ES.16703.1	chr18	-	176	1	Intergenic	novelGene_13921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCAGAGTGAGCAGAGGT	9965	False	NA	NA	False	NA	NA	NA	61776698	61776522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61776500_61776700
ES.16704.1	chr18	-	209	1	Intergenic	novelGene_13922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	61803973	61803764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_61803800_61804000
ES.16705.1	chr18	+	278	1	Intergenic	novelGene_13923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGCTTTGTGATCA	NA	False	NA	NA	False	NA	NA	NA	61804065	61804343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61804100_61804300
ES.16706.1	chr18	+	3456	1	Intergenic	novelGene_13924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGATAAATGGCCATGC	NA	False	NA	NA	False	NA	NA	NA	61855096	61858552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61855100_61858600
ES.16707.1	chr18	-	2823	2	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	9203	-1614	9181	1614	3prime_fragment	FALSE	canonical	3	89	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACAGGTTCTAATAA	NA	False	NA	NA	False	AATAAA	-12	NA	61831503	61828293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61831048_61831434
ES.16707.10	chr18	-	6655	3	NIC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	7	-2	intron_retention	FALSE	canonical	3	252	junction_2	10.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTCGAGTTCTCTCAT	NA	False	NA	-4	True	ATTAAA	-12	NA	61859387	61845496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61851907_61852772_61852927_61859296
ES.16707.11	chr18	-	4150	5	NNC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.549559554983	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCTCGAGTTCTCTCA	NA	False	NA	-5	True	ATTAAA	-11	NA	61859384	61845497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61849199_61851824_61851907_61852772_61852927_61855883_61856009_61859296
ES.16707.12	chr18	-	4100	4	NNC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	121.689039038946	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCTCGAGTTCTCTCA	NA	False	NA	-5	True	ATTAAA	-11	NA	61859401	61845497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61849199_61851766_61851907_61852772_61852927_61859296
ES.16707.13	chr18	-	3997	4	NNC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	4	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.22427610752	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAAAAACACCTC	NA	False	NA	-18	True	AATATA	-30	NA	61859390	61845510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61849199_61851824_61851907_61852772_61852906_61859296
ES.16707.15	chr18	-	3530	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-13	521	-11	-521	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGCAAAAGCAGCCGT	NA	False	NA	NA	False	AATAAA	-26	NA	61859407	61846015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.16	chr18	-	3380	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-4	662	-2	-662	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCCAGTAAATACCTT	NA	False	NA	NA	False	NA	NA	NA	61859398	61846156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.17	chr18	-	4200	3	NIC	ENSMUSG00000024580.9	novel	3960	4	NA	NA	21	144	intron_retention	FALSE	canonical	3	252	junction_2	10.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCGCATTGTAAAGCAGT	NA	False	NA	NA	False	AATACA	-12	NA	61859373	61847937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61851907_61852772_61852927_61859296
ES.16707.18	chr18	-	4060	3	NIC	ENSMUSG00000024580.9	novel	3960	4	NA	NA	15	-2	intron_retention	FALSE	canonical	3	252	junction_2	10.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTACAGTTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	61859379	61848083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61851907_61852772_61852927_61859296
ES.16707.19	chr18	-	1480	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-33	2591	-31	-4	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTTTTTACAGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	61859427	61848085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.2	chr18	-	2622	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	47	-652	25	652	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATTAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	61840659	61829255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
ES.16707.20	chr18	-	2814	3	ISM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	5003	2591	-2098	-4	3prime_fragment	FALSE	canonical	3	248	junction_1	12.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTTTTTACAGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	61854391	61848085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_61849199_61851824_61851907_61852772
ES.16707.22	chr18	-	3558	3	NIC	ENSMUSG00000024580.9	novel	3960	4	NA	NA	45	445	intron_retention	FALSE	canonical	3	252	junction_2	10.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTACCTGTGTTTTCA	NA	False	NA	NA	False	TTTAAA	-28	NA	61859349	61848555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61851907_61852772_61852927_61859296
ES.16707.23	chr18	-	1021	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-49	3066	-47	440	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATCTTCTTACCTGTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	61859443	61848560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.24	chr18	-	830	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-30	3238	-28	268	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGATTTAGTCACATTGG	NA	False	NA	NA	False	NA	NA	NA	61859424	61848732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.3	chr18	-	2046	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	-27	-2	-27	2	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTATTCTTTTTTT	NA	False	NA	1	True	TATAAA	-18	NA	61840733	61829905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
ES.16707.4	chr18	-	3160	4	NIC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	53	junction_2	11.5854314646552	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840674	61829907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_61832576_61835266_61835442_61836582_61836790_61840564
ES.16707.5	chr18	-	2187	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	34.3693177121688	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840834	61829907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836423_61836466_61836582_61836790_61840564
ES.16707.6	chr18	-	2043	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	35.3349056253948	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGACTTATTCTTTT	NA	False	NA	-2	True	TATAAA	-15	NA	61840676	61829908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835025_61835083_61835266_61835442_61836582_61836790_61840564
ES.16707.7	chr18	-	4661	5	Fusion	ENSMUSG00000024579.8_ENSMUSG00000024580.9	novel	4038	4	NA	NA	14	-3776	multi-exon	FALSE	canonical	1	1	junction_1	111.544834035468	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACACAATTGTGTAGTC	NA	False	NA	NA	False	AATAAA	-25	NA	61859380	61839730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_-_61841186_61846312_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.8	chr18	-	4045	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-7	0	-5	0	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGAGTTCTCTCATGA	NA	False	NA	-2	True	ATTAAA	-14	NA	61859401	61845494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ES.16707.9	chr18	-	4138	5	NNC	ENSMUSG00000024580.9	novel	4038	4	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	130.711514412465	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTCGAGTTCTCTCAT	NA	False	NA	-4	True	ATTAAA	-12	NA	61859411	61845496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61849199_61851620_61851706_61851824_61851907_61852772_61852927_61859296
ES.16708.1	chr18	+	895	2	FSM	ENSMUSG00000098702.2	ENSMUST00000184678.2	890	2	-14	9	-14	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACTACACCCGATCTC	NA	False	NA	2	True	AATAAA	-16	NA	61859489	61868979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61860074_61868668
ES.16708.2	chr18	+	1806	1	FSM	ENSMUSG00000098702.2	ENSMUST00000184181.2	1865	1	55	4	12	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCAACTTGGTCAGACT	NA	False	NA	NA	False	AATAAA	-13	NA	61859515	61861321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_61859500_61861300
ES.16709.1	chr18	+	187	1	Intergenic	novelGene_13925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATCCCCCTGAC	NA	False	NA	NA	False	NA	NA	NA	61883251	61883438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_61883300_61883400
ES.1671.1	chr1	+	2720	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	-41	-46	-41	46	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGACAGTGAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	156351540	156354260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_156351500_156354300
ES.1671.10	chr1	+	4596	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8857	False	NA	NA	False	NA	NA	NA	156415847	156420443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156415800_156420400
ES.1671.11	chr1	+	9375	6	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	74128	-54	17192	54	intron_retention	FALSE	canonical	1	1	junction_5	4.53431361950185	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTTGAGTTGGAGTAT	5395	False	NA	17	True	AATAAA	-24	NA	156460684	156477192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562
ES.1671.12	chr1	+	3525	1	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	83858	3199	26922	-3199	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAGAAGGAAAAAAA	1507	False	NA	NA	False	NA	NA	NA	156470414	156473939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_156470400_156473900
ES.1671.2	chr1	+	1578	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	-17	1072	-17	-1072	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTCTTTCTTTCTT	NA	False	NA	11	True	CATAAA	-18	NA	156351564	156353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_156351600_156353100
ES.1671.3	chr1	+	1043	2	Genic_Genomic	ENSMUSG00000101523.3	novel	2633	1	NA	NA	-7	134160	multi-exon	FALSE	non_canonical	0	0	junction_1	0	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	156351574	156488374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156352424_156488180
ES.1671.4	chr1	+	2575	2	Genic_Genomic	ENSMUSG00000101523.3	novel	2633	1	NA	NA	-7	46	multi-exon	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGACAGTGAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	156351574	156354260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_156352115_156352225
ES.1671.5	chr1	+	352	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAAATAATAAAT	4864	False	NA	NA	False	NA	NA	NA	156370923	156371275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156370900_156371300
ES.1671.6	chr1	+	2113	9	ISM	ENSMUSG00000026596.14	ENSMUST00000027888.13	3549	12	-282	7229	-19	5494	5prime_fragment	FALSE	canonical	2	3	junction_2	3.46410161513775	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTTGAAGGATGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	156386336	156463057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634
ES.1671.7	chr1	+	10400	13	NNC	ENSMUSG00000026596.14	novel	10151	13	NA	NA	3	54	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	3.20047739494525	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTTGAGTTGGAGTAT	NA	False	NA	17	True	AATAAA	-24	NA	156386358	156477192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ES.1671.8	chr1	+	5592	12	NIC	ENSMUSG00000026596.14	novel	10151	13	NA	NA	41	2196	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.02471702203248	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGCCTGCTTTTCTTT	NA	False	NA	NA	False	AAAACA	-36	NA	156386396	156472482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468562_156468800_156469111
ES.1671.9	chr1	+	10126	12	NNC	ENSMUSG00000026596.14	novel	10151	13	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.71728150913834	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGCAAGTTGTGTT	NA	False	NA	26	True	AATAAA	-39	NA	156386512	156477135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ES.16710.1	chr18	-	1634	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49273	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	12.8646803302686	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTCAGAGGGTAGCTGG	NA	False	NA	0	True	AATAAA	-20	NA	61870409	61863332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870297
ES.16710.2	chr18	-	3401	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	41	2	-1	-2	multi-exon	TRUE	canonical	1	2	junction_17	8.65740245593045	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTCAGAGGGTAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	61919732	61863333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
ES.16710.3	chr18	-	924	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49274	-76	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCATCCTTTCCTTGGCC	NA	False	NA	NA	False	AATGAA	-13	NA	61870408	61864085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
ES.16711.1	chr18	+	4533	17	NNC	ENSMUSG00000045629.9	novel	3615	10	NA	NA	-987	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.45402575793779	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATACCCTTTTGTCACC	NA	False	NA	NA	False	ATTAAA	-17	NA	62085158	62148785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62085253_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146106_62146301_62147969
ES.16711.10	chr18	+	3663	11	ISM	ENSMUSG00000045629.9	ENSMUST00000235652.2	4487	17	2	23913	2	-23913	intron_retention	FALSE	canonical	3	16	junction_5	3.26343377441614	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTCATCTTTAAAATGG	NA	False	NA	NA	False	NA	NA	NA	62086156	62124873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414
ES.16711.11	chr18	+	4495	17	NNC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	6.03343548486267	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCCTTTTGTCACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	62086170	62148786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107535_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ES.16711.12	chr18	+	1406	1	Intergenic	novelGene_13927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGATGGGACTTTCCC	NA	False	NA	NA	False	NA	NA	NA	62118073	62119479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_62118100_62119500
ES.16711.13	chr18	+	3058	7	NNC	ENSMUSG00000045629.9	novel	3615	10	NA	NA	11859	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.1317863196644	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTAATATACCCTTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	62122888	62148780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144657_62145029_62146106_62146301_62147969
ES.16711.14	chr18	+	2646	7	ISM	ENSMUSG00000045629.9	ENSMUST00000235652.2	4487	17	36895	0	12020	0	3prime_fragment	FALSE	canonical	0	0	junction_1	9.00771274458111	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCCTTTTGTCACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	62123049	62148786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_62124116_62124248_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ES.16711.2	chr18	+	4613	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	-73	-4	-73	0	multi-exon	FALSE	canonical	3	14	junction_11	4.02336923485777	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTGTCACCTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	62086072	62148790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ES.16711.3	chr18	+	1168	7	ISM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	-66	39814	-66	-39814	5prime_fragment	FALSE	canonical	3	16	junction_5	3.77491721763537	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGACCCGCTTCTCAC	NA	False	NA	NA	False	AATGAA	-14	NA	62086079	62108972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639
ES.16711.5	chr18	+	4691	16	NIC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	-44	2	intron_retention	FALSE	canonical	3	14	junction_10	4.1505019776729	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCCTTTTGTCACCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	62086101	62148788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ES.16711.8	chr18	+	4652	18	NNC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.48377714895526	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCCTTTTGTCACCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	62086145	62148788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108397_62108512_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ES.16711.9	chr18	+	4249	15	NNC	ENSMUSG00000045629.9	novel	4536	17	NA	NA	1	-3250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.98168974829838	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGGTTGGTTATTAA	NA	False	NA	NA	False	AATAAA	-12	NA	62086146	62145536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144657
ES.16712.1	chr18	-	3850	1	Intergenic	novelGene_13926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTAACTATAGTTACAT	NA	False	NA	NA	False	NA	NA	NA	62093178	62089328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_62089300_62093200
ES.16713.1	chr18	-	379	1	Intergenic	novelGene_13928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62321937	62321558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_62321600_62321900
ES.16714.1	chr18	-	158	1	Intergenic	novelGene_13929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	62389033	62388875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_62388900_62389000
ES.16715.1	chr18	+	4542	7	NNC	ENSMUSG00000026322.10	novel	1389	7	NA	NA	-158	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTGTGCCAGTACCA	NA	False	NA	NA	False	AATAAA	-13	NA	62457116	62600880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62457160_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453_62571023_62597504
ES.16715.2	chr18	+	1564	6	NNC	ENSMUSG00000026322.10	novel	1203	6	NA	NA	-148	6444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCTATGCTTATTTG	NA	False	NA	NA	False	NA	NA	NA	62457126	62636092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62457160_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62635115
ES.16715.3	chr18	+	4798	7	FSM	ENSMUSG00000026322.10	ENSMUST00000027560.8	4661	7	-136	-1	-136	1	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCGTGTGTGCCAGTAC	NA	False	NA	NA	False	AATAAA	-11	NA	62457138	62600878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_62457440_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453_62571023_62597504
ES.16715.4	chr18	+	4557	7	NNC	ENSMUSG00000026322.10	novel	1389	7	NA	NA	187	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTTGTATGACTTCAT	NA	False	NA	NA	False	GATAAA	-16	NA	62457461	62600767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62457633_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453_62571023_62597504
ES.16716.1	chr18	+	6194	1	Antisense	novelGene_ENSMUSG00000042211.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACAGCCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	62670902	62677096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_62670900_62677100
ES.16717.1	chr18	-	4543	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-194	-95	-194	95	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCATGGACTTGAAAC	NA	False	NA	47	True	AATAAA	-18	NA	62681960	62637130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.10	chr18	-	4222	21	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-14	92	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	71.3030679564351	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGCCATGGACTTGA	NA	False	NA	44	True	AATAAA	-15	NA	62681780	62637133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.11	chr18	-	4256	21	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-56	92	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.4361235446699	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGCCATGGACTTGA	NA	False	NA	44	True	AATAAA	-15	NA	62681822	62637133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.12	chr18	-	4479	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-31	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	89.1337095706118	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGCCATGGACTTGA	NA	False	NA	44	True	AATAAA	-15	NA	62681797	62637133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677895_62677998_62681682
ES.16717.14	chr18	-	4274	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-194	92	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	77.8143613347303	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGCCATGGACTTGA	NA	False	NA	44	True	AATAAA	-15	NA	62681960	62637133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.15	chr18	-	6918	4	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	8604	91	intron_retention	FALSE	canonical	3	306	junction_3	8.60232526704263	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTGCCATGGACTTG	NA	False	NA	43	True	AATAAA	-14	NA	62645196	62637134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62643884_62644084
ES.16717.16	chr18	-	4301	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-36	91	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	108.963258649589	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTGCCATGGACTTG	NA	False	NA	43	True	AATAAA	-14	NA	62681802	62637134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62674535_62674678_62681682
ES.16717.19	chr18	-	4259	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-9	91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	86.6269924888565	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTGCCATGGACTTG	NA	False	NA	43	True	AATAAA	-14	NA	62681775	62637134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674144_62681578
ES.16717.20	chr18	-	4007	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-30	86	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	87.5264959883577	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681796	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.21	chr18	-	4082	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	9	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.3015988455981	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681746	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652837_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.23	chr18	-	4008	4	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	39114	-86	11148	86	intron_retention	FALSE	canonical	3	311	junction_3	6.54896090146283	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62642652	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674
ES.16717.24	chr18	-	4376	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-13	86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	70.0606151551524	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681779	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653062_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.25	chr18	-	4251	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-37	86	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	70.7325453417417	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681803	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647991_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.26	chr18	-	4396	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	86	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	88.9196057177029	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681798	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647376_62647401_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.28	chr18	-	4485	23	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-37	86	combination_of_known_junctions	FALSE	canonical	1	2	junction_22	88.4667024253562	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681803	62637139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677889_62677998_62681682
ES.16717.29	chr18	-	4199	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-43	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	117.12940302142	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAACTATTCTTGCCA	NA	False	NA	35	True	AATAAA	-6	NA	62681809	62637142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62643780_62643884_62644084_62644186_62647376_62647401_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.3	chr18	-	4281	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	94	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	68.1552220854768	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681798	62637131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62647992_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.30	chr18	-	4326	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-34	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.7202017727291	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAGCATTTCTAGTTA	NA	False	NA	-42	True	AATAAA	-22	NA	62681800	62637219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648620_62650006_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.31	chr18	-	4385	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	70.1770356066043	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAGCATTTCTAGTTA	NA	False	NA	-42	True	AATAAA	-22	NA	62681808	62637219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674144_62681625
ES.16717.32	chr18	-	3489	21	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	8	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	72.3257215657058	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAGAGCATTTCTAGT	NA	False	NA	-44	True	AATAAA	-20	NA	62681747	62637221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.33	chr18	-	4839	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-28	3	intron_retention	FALSE	canonical	0	0	junction_16	72.0727930636797	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCAGAGCATTTCTAG	NA	False	NA	-45	True	AATAAA	-19	NA	62681794	62637222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663858_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.34	chr18	-	4182	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	100.256664418534	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCAGAGCATTTCTAG	NA	False	NA	-45	True	AATAAA	-19	NA	62681808	62637222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677889_62677998_62681682
ES.16717.36	chr18	-	4117	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	100.256664418534	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCAGAGCATTTCTAG	NA	False	NA	-45	True	AATAAA	-19	NA	62681784	62637222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677889_62677998_62681723
ES.16717.37	chr18	-	3985	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.0515315541714	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCAGAGCATTTCTAG	NA	False	NA	-45	True	AATAAA	-19	NA	62681799	62637222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662722_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.38	chr18	-	4887	21	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-36	3	intron_retention	FALSE	canonical	3	214	junction_20	36.9830704512213	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCAGAGCATTTCTAG	NA	False	NA	-45	True	AATAAA	-19	NA	62681802	62637222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.39	chr18	-	4855	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-43	2	intron_retention	FALSE	canonical	3	48	junction_7	76.5979601556073	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCCAGAGCATTTCTA	NA	False	NA	-46	True	AATAAA	-18	NA	62681809	62637223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.40	chr18	-	4083	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	82.8007470909584	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCCAGAGCATTTCTA	NA	False	NA	-46	True	AATAAA	-18	NA	62681760	62637223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647991_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.41	chr18	-	4545	24	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	110.233332180559	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCCAGAGCATTTCTA	NA	False	NA	-46	True	AATAAA	-18	NA	62681802	62637223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62674535_62674678_62677889_62677998_62681682
ES.16717.44	chr18	-	4292	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.9986426365732	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTCCAGAGCATTTCT	NA	False	NA	-47	True	AATAAA	-17	NA	62681809	62637224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644090_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.46	chr18	-	5447	21	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-51	0	intron_retention	FALSE	canonical	3	214	junction_20	37.6510292024003	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681817	62637225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.47	chr18	-	4222	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	97.45423284804	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681941	62637225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666974_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.48	chr18	-	4116	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	83.4737084356506	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTTTCCAGAGCATTT	NA	False	NA	-49	True	AATAAA	-15	NA	62681808	62637226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.49	chr18	-	4185	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-175	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	97.6480968910623	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGTTTCCAGAGCATT	NA	False	NA	-50	True	AATAAA	-14	NA	62681941	62637227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647376_62647401_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.50	chr18	-	4354	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	99.0504921744461	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGTTTCCAGAGCATT	NA	False	NA	-50	True	AATAAA	-14	NA	62681798	62637227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677889_62677998_62681723
ES.16717.53	chr18	-	4206	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	84.3194713137504	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGTTTCCAGAGCATT	NA	False	NA	-50	True	AATAAA	-14	NA	62681756	62637227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662722_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.54	chr18	-	3120	16	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.15861305941	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAGAGTTTCCAGAGCAT	NA	False	NA	-51	True	AATAAA	-13	NA	62681798	62637228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62648255_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.56	chr18	-	4066	21	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	85.2217695192959	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAGTTTCCAGAGC	NA	False	NA	-53	True	AATAAA	-11	NA	62681795	62637230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.57	chr18	-	4175	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	70.899181078141	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAGTTTCCAGAGC	NA	False	NA	-53	True	AATAAA	-11	NA	62681768	62637230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667060_62669186_62669321_62673951_62674118_62681682
ES.16717.58	chr18	-	4165	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.4741263215368	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAGTTTCCAGAGC	NA	False	NA	-53	True	AATAAA	-11	NA	62681794	62637230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62640998_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.59	chr18	-	4424	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-175	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	85.6517496740272	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAGAGTTTCCAGAGC	NA	False	NA	-53	True	AATAAA	-11	NA	62681941	62637230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666739_62666967_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.6	chr18	-	4180	23	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-33	94	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	89.0523571504403	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681799	62637131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647376_62647401_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.61	chr18	-	4296	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-48	6	-48	-6	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAGAGAGTTTCCAGAG	NA	False	NA	-54	True	AATAAA	-10	NA	62681814	62637231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.62	chr18	-	9023	20	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-31	-8	intron_retention	FALSE	canonical	0	0	junction_17	74.3747343392448	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATAGAGAGTTTCCAG	NA	False	NA	-56	True	AATAAA	-8	NA	62681797	62637233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62648616_62650034_62650215_62651562_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667060_62669186_62669321_62673951_62674118_62681682
ES.16717.64	chr18	-	3921	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	4	-93	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGATGTGGCTCTTCTTTT	NA	False	NA	-25	True	ACTAAA	-32	NA	62681751	62637318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.65	chr18	-	4160	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-42	-95	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGATGTGGCTCTTCTT	NA	False	NA	-27	True	ACTAAA	-30	NA	62681808	62637320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.67	chr18	-	3979	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-41	316	-41	-316	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAATCGTTTAGCAGTG	NA	False	NA	NA	False	TTTAAA	-17	NA	62681807	62637541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.68	chr18	-	3866	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-25	-372	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATCTTTATATCCTATG	NA	False	NA	NA	False	AATATA	-19	NA	62681791	62637597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.7	chr18	-	4498	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-191	94	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681957	62637131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.70	chr18	-	4611	15	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-33	8855	-33	861	5prime_fragment	FALSE	canonical	3	214	junction_14	35.5617456700601	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTCTGTCCTTGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	62681799	62646080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.72	chr18	-	4037	15	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	317	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	67.6544340673957	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTCAGAGTTTGTAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	62681766	62646624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.73	chr18	-	3761	15	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	-42	9714	-42	2	5prime_fragment	FALSE	canonical	3	214	junction_14	35.5617456700601	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGATGTTTTATGATAG	NA	False	NA	NA	False	AATAAA	-21	NA	62681808	62646939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.74	chr18	-	10000	10	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-33	2	intron_retention	FALSE	canonical	3	65	junction_9	74.1499981269199	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGATGTTTTATGATAG	NA	False	NA	NA	False	AATAAA	-21	NA	62681799	62646939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62648616_62650034_62650215_62651562_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.75	chr18	-	3836	15	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-159	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.83076741071	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGATGTTTTATGATAG	NA	False	NA	NA	False	AATAAA	-21	NA	62681925	62646939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655588_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
ES.16717.8	chr18	-	4178	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	-56	93	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGCCATGGACTTGAA	NA	False	NA	45	True	AATAAA	-16	NA	62681822	62637132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ES.16717.9	chr18	-	5830	5	ISM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	36215	-93	8249	93	intron_retention	FALSE	canonical	3	311	junction_3	13.9104277432436	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGCCATGGACTTGAA	NA	False	NA	45	True	AATAAA	-16	NA	62645551	62637132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904
ES.16718.1	chr18	+	1021	6	NNC	ENSMUSG00000044176.13	novel	7817	9	NA	NA	1784	1519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATGTATTAGAGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	62781109	62788065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_62781320_62783341_62783403_62783920_62783995_62784818_62784851_62786487_62786604_62787537
ES.16719.1	chr18	-	3962	1	Genic_Genomic	ENSMUSG00000041789.8	novel	NA	NA	NA	NA	3816	3136	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTATGAATTTTATT	NA	False	NA	NA	False	AATACA	-28	NA	62885570	62881608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_62881600_62885600
ES.16719.2	chr18	-	3753	3	FSM	ENSMUSG00000041789.8	ENSMUST00000067450.3	2101	3	63	-1715	63	1715	multi-exon	FALSE	canonical	1	1	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGTGCTGTTTGTACT	NA	False	NA	NA	False	AATAAA	-14	NA	62889323	62883029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_62886405_62888196_62888246_62888994
ES.1672.1	chr1	-	170	1	Antisense	novelGene_ENSMUSG00000101523.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAATCAGCCT	NA	False	NA	NA	False	NA	NA	NA	156353326	156353156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_156353200_156353300
ES.16720.1	chr18	+	2702	2	Intergenic	novelGene_13930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTCTGCCTTCATGG	NA	False	NA	NA	False	NA	NA	NA	62947783	62951443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_62947898_62948855
ES.16721.1	chr18	+	3491	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	23	7365	23	1350	multi-exon	FALSE	canonical	3	18	junction_2	2.8613807855649	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTCTTCTTTGTCGACT	NA	False	NA	18	True	AATAAA	-28	NA	63055324	63086885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
ES.16721.2	chr18	+	2751	4	NNC	ENSMUSG00000071847.14	novel	10879	5	NA	NA	40	5679	intron_retention	FALSE	canonical	1	1	junction_3	9.41629792788369	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTTTAAGCTGATGGA	NA	False	NA	NA	False	ATTAAA	-33	NA	63055341	63074448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63055793_63066945_63067130_63069976_63070509_63072864
ES.16721.3	chr18	+	1815	3	ISM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	45	23089	45	2392	5prime_fragment	FALSE	canonical	3	18	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTATGTTCTGGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	63055346	63071161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63055793_63066945_63067130_63069976
ES.16721.4	chr18	+	2906	3	ISM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	45	21998	45	3483	5prime_fragment	FALSE	canonical	3	18	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATGCCTAGTGTAT	NA	False	NA	NA	False	AGTAAA	-11	NA	63055346	63072252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63055793_63066945_63067130_63069976
ES.16721.5	chr18	+	7015	1	NIC	ENSMUSG00000071847.14	novel	10879	5	NA	NA	-2	-6357	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGATATTTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	63055397	63062412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63055400_63062400
ES.16721.6	chr18	+	2832	3	ISM	ENSMUSG00000071847.14	ENSMUST00000096554.12	1842	6	14573	-1339	3392	1339	3prime_fragment	FALSE	canonical	3	19	junction_1	3	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCACGAAATACGTCTT	NA	False	NA	7	True	AATAAA	-17	NA	63069972	63086874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63070509_63082945_63083268_63084900
ES.16721.7	chr18	+	5189	2	ISM	ENSMUSG00000071847.14	ENSMUST00000096554.12	1842	6	24653	-1339	13472	1339	3prime_fragment	FALSE	canonical	3	25	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCACGAAATACGTCTT	NA	False	NA	7	True	AATAAA	-17	NA	63080052	63086874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63083268_63084900
ES.16722.1	chr18	+	3743	12	NNC	ENSMUSG00000024581.14	novel	1129	13	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.516201440908	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110878	63132521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
ES.16722.10	chr18	+	4077	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	102.020453044996	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTGTCAGTTTTATT	NA	False	NA	2	True	AATAAA	-14	NA	63110947	63132517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120082_63124871_63124951_63127382_63128164_63129887
ES.16722.11	chr18	+	3485	11	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	71.8036210786058	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGGTGTCAGTTTTAT	NA	False	NA	1	True	AATAAA	-13	NA	63110947	63132516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.12	chr18	+	6261	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_6	75.498998439927	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110947	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63119360_63119481_63119549_63120024_63120082_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.13	chr18	+	1312	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTTTTCTCTTGGGTTC	NA	False	NA	-97	True	AGTAAA	-19	NA	63110952	63130321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115775_63117096_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.14	chr18	+	3570	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.1892076113034	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110952	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117195_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.15	chr18	+	5954	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	77.5152712950849	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGGTGTCAGTTTTA	NA	False	NA	0	True	AATAAA	-12	NA	63110952	63132515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.16	chr18	+	3270	11	NNC	ENSMUSG00000024581.14	novel	1129	13	NA	NA	-12	17	intron_retention	FALSE	non_canonical	0	0	junction_3	94.9802611072427	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGTATACTTAGTCTT	NA	False	NA	NA	False	AGTAAA	-6	NA	63110959	63130308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63127463_63128033_63128164_63129887
ES.16722.17	chr18	+	3533	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.2099786924412	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110959	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119458_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.18	chr18	+	4089	11	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-11	-4	intron_retention	FALSE	non_canonical	1	9	junction_3	71.4895796602554	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTGTCAGTTTTATT	NA	False	NA	2	True	AATAAA	-14	NA	63110960	63132517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.19	chr18	+	5419	8	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-9	5	intron_retention	FALSE	canonical	3	194	junction_5	18.754047182256	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTCTTTCGATGTTGTC	NA	False	NA	19	True	NA	NA	NA	63110962	63130437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.20	chr18	+	1928	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-9	25	intron_retention	FALSE	non_canonical	0	0	junction_3	95.4763237408193	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGTCTTTTCTCTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	63110962	63130316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117195_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.21	chr18	+	1418	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTCGATGTTGT	NA	False	NA	18	True	NA	NA	NA	63110968	63130436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.22	chr18	+	1559	12	NNC	ENSMUSG00000024581.14	novel	1129	13	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.516201440908	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTCTGGTTCTTTCG	NA	False	NA	11	True	NA	NA	NA	63110970	63130429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
ES.16722.23	chr18	+	1991	11	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	1	9	junction_3	71.4895796602554	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTCTGGTTCTTTCG	NA	False	NA	11	True	NA	NA	NA	63110970	63130429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.24	chr18	+	2909	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-1	-592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTAGACTGTGTTATG	NA	False	NA	NA	False	AATATA	-19	NA	63110970	63131929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.25	chr18	+	4068	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	77.0958998765679	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110972	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.26	chr18	+	5705	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	108.374166663463	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110973	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63127765_63127867_63128033_63128164_63129887
ES.16722.27	chr18	+	1875	11	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	2	25	intron_retention	FALSE	non_canonical	1	9	junction_3	71.4895796602554	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGTCTTTTCTCTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	63110973	63130316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.3	chr18	+	3572	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTTTTATTTGCTTGT	NA	False	NA	9	True	AATAAA	-21	NA	63110902	63132524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.30	chr18	+	4116	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	95.4763237408193	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTGTCAGTTTTATT	NA	False	NA	2	True	AATAAA	-14	NA	63110975	63132517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117195_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.31	chr18	+	5976	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	96.1283863729474	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGTGTCAGTTTTATT	NA	False	NA	2	True	AATAAA	-14	NA	63110976	63132517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117195_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63127463_63128033_63128164_63129887
ES.16722.32	chr18	+	3485	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	97.9973979246388	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTCAGTTTTATTT	NA	False	NA	3	True	AATAAA	-15	NA	63110976	63132518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120089_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.34	chr18	+	4068	9	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	15	1	intron_retention	FALSE	non_canonical	0	0	junction_3	79.3516697996961	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTTCTTTCGATGT	NA	False	NA	15	True	NA	NA	NA	63110994	63130433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.35	chr18	+	1048	9	NNC	ENSMUSG00000024581.14	novel	1191	11	NA	NA	2439	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.149457022213	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGTCTTTTCTCTTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	63115745	63130317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.36	chr18	+	4583	6	NIC	ENSMUSG00000024581.14	novel	826	8	NA	NA	-328	-6	intron_retention	FALSE	canonical	3	194	junction_3	21.0580151011438	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGGTGTCAGTTTTA	NA	False	NA	0	True	AATAAA	-12	NA	63118402	63132515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63128164_63129887
ES.16722.37	chr18	+	3985	7	ISM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	7532	2	-297	-2	3prime_fragment	FALSE	canonical	3	194	junction_3	19.4886006566802	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63118433	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.38	chr18	+	1029	5	NIC	ENSMUSG00000024581.14	novel	583	4	NA	NA	158	-9	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.678634774216	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCAAACTGGTCTGGTT	NA	False	NA	5	True	NA	NA	NA	63121438	63130423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63121643_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.39	chr18	+	4708	2	NIC	ENSMUSG00000024581.14	novel	826	8	NA	NA	3040	-3	intron_retention	FALSE	canonical	3	235	junction_1	0	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTCAGTTTTATTT	NA	False	NA	3	True	AATAAA	-15	NA	63126086	63132518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63128164_63129887
ES.16722.4	chr18	+	3561	10	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.6758845747629	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	False	NA	4	True	AATAAA	-16	NA	63110904	63132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115819_63119245_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.40	chr18	+	6386	1	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	3089	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63126135	63132521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63126100_63132500
ES.16722.5	chr18	+	3530	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.6791015146086	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTCAGTTTTATTT	NA	False	NA	3	True	AATAAA	-15	NA	63110931	63132518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115775_63117096_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.6	chr18	+	3515	11	NNC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.1451506837448	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTCAGTTTTATTT	NA	False	NA	3	True	AATAAA	-15	NA	63110932	63132518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63111096_63113536_63113605_63115689_63115796_63117110_63117142_63119249_63119360_63119481_63119549_63120045_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.7	chr18	+	3476	11	NIC	ENSMUSG00000024581.14	novel	1191	11	NA	NA	1	-6	combination_of_known_junctions	FALSE	non_canonical	1	4	junction_1	95.007841781613	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGGTGTCAGTTTTA	NA	False	NA	0	True	AATAAA	-12	NA	63110932	63132515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16722.8	chr18	+	3545	12	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	6	0	combination_of_known_junctions	FALSE	non_canonical	1	9	junction_3	68.5344818803759	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110937	63132521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ES.16723.1	chr18	-	1636	1	Antisense	novelGene_ENSMUSG00000024581.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-12	NA	63117322	63115686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_63115700_63117300
ES.16724.1	chr18	-	5537	27	ISM	ENSMUSG00000041482.18	ENSMUST00000238051.2	8337	54	307617	-1332	4266	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0.266469355010597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCAAGAGTGCTCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	63211723	63143286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682
ES.16725.1	chr18	-	239	1	Intergenic	novelGene_13931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACTATTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	63259854	63259615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_63259600_63259900
ES.16726.1	chr18	+	173	1	Intergenic	novelGene_13932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGACCA	NA	False	NA	NA	False	NA	NA	NA	63828692	63828865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_63828700_63828900
ES.16727.10	chr18	-	2530	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	106	1707	-9	566	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATCCTGAAGTTGTTA	NA	False	NA	-4	True	AGTAAA	-17	NA	63825402	63795871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.11	chr18	-	2888	9	NNC	ENSMUSG00000024583.4	novel	1998	9	NA	NA	-1587	14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	312.499199998976	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAATGCATTCTCTCTC	NA	False	NA	13	True	AATAAA	-39	NA	63827095	63797156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146_63826473_63826522
ES.16727.12	chr18	-	3588	7	NIC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	853	junction_1	58.1090928054007	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCGTCATTCTATAT	NA	False	NA	-3	True	AATAAA	-23	NA	63825399	63797172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_63797404_63804652_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.13	chr18	-	13679	5	NNC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_2	491.485503346742	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGTCTTCGTCATTCT	NA	False	NA	-7	True	AATAAA	-19	NA	63825481	63797176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63810073_63812423_63812598_63813769_63813947_63815281_63815379_63825146
ES.16727.14	chr18	-	9928	6	NIC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	15	-2	intron_retention	FALSE	canonical	3	925	junction_4	42.1122310024059	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAAGTCTTCGTCATT	NA	False	NA	-9	True	AATAAA	-17	NA	63825493	63797178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_63804758_63807119_63807293_63808514_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.16	chr18	-	2400	8	NNC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	360	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	322.253861141194	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAAGTCTTCGTCATT	NA	False	NA	-9	True	AATAAA	-17	NA	63825033	63797178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63823600
ES.16727.18	chr18	-	3508	7	NIC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	853	junction_1	58.0478729632323	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTTTGTAGTGTA	NA	False	NA	0	True	AATAAA	-24	NA	63825399	63797241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63812598_63815281_63815379_63825146
ES.16727.19	chr18	-	1224	3	NNC	ENSMUSG00000024583.4	novel	705	3	NA	NA	-4105	610	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACATGCCTATGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	63829613	63826140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63826476_63826524_63827340_63829539
ES.16727.2	chr18	-	5004	1	Genic_Genomic	ENSMUSG00000024583.4	novel	NA	NA	NA	NA	14	2	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGTTTGTTTATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	63799166	63794162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_63794200_63799200
ES.16727.3	chr18	-	4342	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	2	-1	2	1	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTTGTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	63825506	63794163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.4	chr18	-	4337	9	NNC	ENSMUSG00000024583.4	novel	1998	9	NA	NA	-33	-1	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	401.332292963076	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATTTGTTTGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	63825426	63794165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63797404_63804652_63804758_63806868_63806946_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.5	chr18	-	4304	8	NNC	ENSMUSG00000024583.4	novel	4343	8	NA	NA	36	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	332.806556548444	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTTATTTGTTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	63825472	63794169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808579_63809941_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.6	chr18	-	3991	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	141	211	26	-211	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGAATCAATACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	63825367	63794375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16727.7	chr18	-	2797	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	13	1533	13	740	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGACATCAAACTTTTTG	NA	False	NA	-11	True	AGTAAA	-23	NA	63825495	63795697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ES.16728.1	chr18	+	7020	27	FSM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	-27	-6	3	6	multi-exon	FALSE	canonical	3	34	junction_9	8.74837262973172	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTTTATCCTGTTCT	NA	False	NA	8	True	AATAAA	-17	NA	63841758	64122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.11	chr18	+	4641	21	ISM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	1	84728	1	39723	5prime_fragment	FALSE	canonical	3	34	junction_9	8.89438024822416	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGGAACAGGTCTTT	NA	False	NA	NA	False	AATAAA	-36	NA	63841786	64038097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100
ES.16728.12	chr18	+	4673	20	ISM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	1	123219	1	1232	5prime_fragment	FALSE	canonical	3	34	junction_9	8.1189221887468	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACAGCTATTGCAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	63841786	63999606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355
ES.16728.13	chr18	+	6632	24	NIC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	3	6	intron_retention	FALSE	canonical	0	0	junction_1	12.8936320209579	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTTTATCCTGTTCT	NA	False	NA	8	True	AATAAA	-17	NA	63841788	64122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63841991_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.14	chr18	+	6191	27	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	8	1	intron_retention	FALSE	non_canonical	0	0	junction_14	15.8890383114126	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTGTGTGCTGTGGTC	NA	False	NA	25	True	AATAAA	-34	NA	63841793	64122848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64122393_64122433
ES.16728.15	chr18	+	6962	28	NNC	ENSMUSG00000040560.11	novel	7135	28	NA	NA	8	2	intron_retention	TRUE	non_canonical	0	0	junction_27	12.7134721108694	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTGTGTGCTGTGGTCC	NA	False	NA	26	True	AATAAA	-35	NA	63841793	64122849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64122390_64122430
ES.16728.16	chr18	+	5764	23	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	9	2	intron_retention	FALSE	canonical	0	0	junction_12	16.9510720302642	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTGGTTTTTATCCTG	NA	False	NA	4	True	AATAAA	-13	NA	63841794	64122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888220_63888303_63893641_63893857_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.17	chr18	+	6806	26	NIC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	12	3	intron_retention	FALSE	canonical	1	2	junction_1	12.0913853631418	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTTTATCCTGT	NA	False	NA	5	True	AATAAA	-14	NA	63841797	64122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63841991_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.18	chr18	+	2065	6	ISM	ENSMUSG00000040560.11	ENSMUST00000235648.2	2067	12	32	10721	12	-10721	5prime_fragment	FALSE	canonical	3	37	junction_5	10.2567051239665	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGAAAGTATTTATAATC	NA	False	NA	NA	False	NA	NA	NA	63841797	63862848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509
ES.16728.19	chr18	+	5019	27	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	18	-7160	intron_retention	FALSE	canonical	0	0	junction_26	12.6848462916894	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATCTCTGTGTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	63841803	64115665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64115016
ES.16728.2	chr18	+	6830	28	NNC	ENSMUSG00000040560.11	novel	7135	28	NA	NA	0	1	intron_retention	TRUE	non_canonical	0	0	junction_27	14.3536558006053	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTGTGTGCTGTGGTC	NA	False	NA	25	True	AATAAA	-34	NA	63841765	64122848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841832_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64122393_64122433
ES.16728.21	chr18	+	5449	21	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	21	31770	intron_retention	FALSE	non_canonical	0	0	junction_3	16.2157331009116	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACCTGTGCAGTTCTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	63841806	64030144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857189_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64028321
ES.16728.22	chr18	+	5420	16	ISM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	31310	-6	961	6	3prime_fragment	FALSE	canonical	3	37	junction_7	8.2192186706253	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTTTATCCTGTTCT	NA	False	NA	8	True	AATAAA	-17	NA	63873095	64122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.23	chr18	+	177	1	Intergenic	novelGene_13935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATAGCACTT	NA	False	NA	NA	False	NA	NA	NA	63902828	63903005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_63902800_63903000
ES.16728.26	chr18	+	3025	1	Intergenic	novelGene_13937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAACAA	4772	False	NA	NA	False	ATTAAA	-19	NA	63993296	63996321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_63993300_63996300
ES.16728.27	chr18	+	3630	9	NNC	ENSMUSG00000040560.11	novel	7135	28	NA	NA	86565	6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	18.1383571472171	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTTTATCCTGTTCT	9083	False	NA	8	True	AATAAA	-17	NA	63997607	64122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63997668_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.28	chr18	+	2779	3	NIC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	149300	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTTTATCCTGT	NA	False	NA	5	True	AATAAA	-14	NA	64060342	64122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_64060420_64068919_64069020_64120226
ES.16728.3	chr18	+	5244	17	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	-8	8	intron_retention	TRUE	non_canonical	0	0	junction_1	18.5892063776268	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTATCCTGTTCTTA	NA	False	NA	10	True	AATAAA	-19	NA	63841775	64122833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841976_63888220_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64122391_64122431
ES.16728.4	chr18	+	5706	21	ISM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	-10	83674	-8	40777	5prime_fragment	FALSE	canonical	3	34	junction_9	8.89438024822416	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCTAAATGAGTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	63841775	64039151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100
ES.16728.6	chr18	+	6970	28	NNC	ENSMUSG00000040560.11	novel	7135	28	NA	NA	0	2	intron_retention	TRUE	non_canonical	3	26	junction_27	9.6775162612963	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTGTGTGCTGTGGTCC	NA	False	NA	26	True	AATAAA	-35	NA	63841783	64122849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64122398_64122440
ES.16728.7	chr18	+	6848	27	NIC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_12	12.8838690943457	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTTTATCCTGT	NA	False	NA	5	True	AATAAA	-14	NA	63841785	64122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873177_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.8	chr18	+	6831	27	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	0	3	intron_retention	FALSE	canonical	2	6	junction_1	11.4541147873649	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTTTATCCTGT	NA	False	NA	5	True	AATAAA	-14	NA	63841785	64122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841832_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ES.16728.9	chr18	+	6068	22	NNC	ENSMUSG00000040560.11	novel	6987	27	NA	NA	1	44238	intron_retention	FALSE	canonical	1	1	junction_21	13.2968889683199	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTTTGCTTTGCTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	63841786	64042612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64040375
ES.16729.1	chr18	-	1944	1	Intergenic	novelGene_13933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGCTGCCAGCTGATTC	NA	False	NA	NA	False	NA	NA	NA	63856731	63854787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_63854800_63856700
ES.1673.1	chr1	-	160	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	156361545	156361385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156361400_156361500
ES.16730.1	chr18	-	176	1	Intergenic	novelGene_13934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCAGGAGTGAGCGGGG	3256	False	NA	NA	False	NA	NA	NA	63877526	63877350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_63877400_63877500
ES.16731.1	chr18	-	178	1	Intergenic	novelGene_13936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCATTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	63981763	63981585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_63981600_63981800
ES.16732.1	chr18	-	3170	2	Genic_Genomic	ENSMUSG00000119255.2	novel	75	1	NA	NA	-9388	36	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGAAGTGTTCTACA	NA	False	NA	NA	False	NA	NA	NA	64051615	64042116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_64044298_64050626
ES.16733.1	chr18	+	1400	2	Intergenic	novelGene_13938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCAACCTGTCTGG	NA	False	NA	NA	False	AATAAA	-26	NA	64204424	64211144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64204909_64210228
ES.16734.1	chr18	+	2557	1	Intergenic	novelGene_13942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTTACCCTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	64215806	64218363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64215800_64218400
ES.16735.1	chr18	-	6329	3	Intergenic	novelGene_13939	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTCCCAGAAACGCCAA	NA	False	NA	NA	False	NA	NA	NA	64233133	64204585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64204907_64223203_64223296_64227217
ES.16735.2	chr18	-	6519	5	Intergenic	novelGene_13940	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTCCCAGAAACGCCAA	NA	False	NA	NA	False	NA	NA	NA	64233133	64204585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64204908_64215958_64216070_64216406_64216485_64223203_64223296_64227217
ES.16735.3	chr18	-	6406	4	Intergenic	novelGene_13941	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTCCCAGAAACGCCAA	NA	False	NA	NA	False	NA	NA	NA	64233133	64204585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64204908_64216408_64216485_64223203_64223296_64227217
ES.16736.1	chr18	+	165	1	Intergenic	novelGene_13943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGAGTATAAAC	NA	False	NA	NA	False	NA	NA	NA	64441095	64441260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64441100_64441300
ES.16737.1	chr18	+	210	1	Intergenic	novelGene_13944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTCCTGCTGCCAGCT	NA	False	NA	NA	False	NA	NA	NA	64461411	64461621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64461400_64461600
ES.16738.1	chr18	+	175	1	Intergenic	novelGene_13945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTAGCG	NA	False	NA	NA	False	NA	NA	NA	64490669	64490844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64490700_64490800
ES.16739.1	chr18	-	230	1	Intergenic	novelGene_13946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGTGTAACCCAATAATG	NA	False	NA	NA	False	AAGAAA	-33	NA	64491700	64491470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64491500_64491700
ES.1674.1	chr1	-	212	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGACTCTTCTCACAGA	NA	False	NA	NA	False	AATAAA	-13	NA	156385765	156385553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156385600_156385800
ES.16740.1	chr18	-	176	1	Intergenic	novelGene_13947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	64493881	64493705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64493700_64493900
ES.16741.1	chr18	-	3263	1	Antisense	novelGene_ENSMUSG00000045991.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAGGAGAGGAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	64520615	64517352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_64517400_64520600
ES.16742.1	chr18	+	4213	1	ISM	ENSMUSG00000045991.20	ENSMUST00000175965.10	16234	2	49729	7026	49729	-7026	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAACCCTTATACTAGC	2870	False	NA	NA	False	NA	NA	NA	64522819	64527032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_64522800_64527000
ES.16743.1	chr18	+	200	1	Intergenic	novelGene_13948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCATTTAAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	64546934	64547134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64546900_64547100
ES.16744.1	chr18	-	157	1	Intergenic	novelGene_13949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	64547442	64547285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64547300_64547400
ES.16745.1	chr18	-	1913	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-325	-583	-325	583	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTCATTGGGGTTGG	NA	False	NA	NA	False	ATTAAA	-44	NA	64583085	64581172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64581200_64583100
ES.16745.2	chr18	-	192	1	Intergenic	novelGene_13950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAACCT	NA	False	NA	NA	False	TATAAA	-9	NA	64583084	64582892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64582900_64583100
ES.16746.1	chr18	+	3835	7	Antisense	novelGene_ENSMUSG00000024588.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64592757	64609688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_64594755_64595175_64595284_64597154_64597258_64600800_64600905_64603751_64603888_64608127_64608881_64609054
ES.16746.2	chr18	+	5731	6	Antisense	novelGene_ENSMUSG00000024588.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	64592758	64609718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_64594755_64595175_64597258_64600800_64600905_64603751_64603888_64608127_64608877_64609054
ES.16746.3	chr18	+	4196	2	Antisense	novelGene_ENSMUSG00000024588.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64601281	64609717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_64603888_64608127
ES.16747.1	chr18	-	5637	1	NIC	ENSMUSG00000024588.11	novel	6427	11	NA	NA	5747	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAGACAGAG	NA	False	NA	NA	False	NA	NA	NA	64591650	64586013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64586000_64591600
ES.16747.10	chr18	-	2205	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	20	4346	-7	1	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACGCCTTCATTT	NA	False	NA	0	True	AATAAA	-20	NA	64622151	64590330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.11	chr18	-	2021	10	NIC	ENSMUSG00000024588.11	novel	6571	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	98.8374397997684	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTACGCCTTCAT	NA	False	NA	-2	True	AATAAA	-18	NA	64622029	64590332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64591289_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.12	chr18	-	2294	12	NNC	ENSMUSG00000024588.11	novel	6571	11	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	122.983436363743	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGCTGTGTACGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	64622024	64590336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621039_64621111_64621820
ES.16747.13	chr18	-	2073	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-15	1	-5	-1	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGCTGTGTACGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	64622149	64590336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
ES.16747.15	chr18	-	5002	10	NIC	ENSMUSG00000024588.11	novel	6571	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	260	junction_3	30.4403890242983	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGCTGTGTACGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	64622148	64590336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64591289_64591725_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.17	chr18	-	6750	10	NIC	ENSMUSG00000024588.11	novel	6571	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	260	junction_4	27.3919876543182	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGCTGTGTACGCCT	NA	False	NA	-6	True	AATAAA	-14	NA	64622139	64590336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64616529_64621971
ES.16747.18	chr18	-	2101	11	FSM	ENSMUSG00000024588.11	ENSMUST00000235766.3	6427	11	-28	4354	-5	-3	multi-exon	FALSE	canonical	1	7	junction_3	92.8441705224405	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTTTGCTGTGTACGC	NA	False	NA	-8	True	AATAAA	-12	NA	64622149	64590338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594663_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.19	chr18	-	1616	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	33	4922	-4	58	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACTCGAAATTCTTACT	NA	False	NA	NA	False	NA	NA	NA	64622138	64590906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.2	chr18	-	5134	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	23	1414	-4	-1414	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGATTGTTTTGATGTG	NA	False	NA	NA	False	NA	NA	NA	64622148	64587398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.3	chr18	-	4287	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	24	2260	-3	2087	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTTGACTCTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	64622147	64588244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.4	chr18	-	2941	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	2	3628	2	719	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTTGAGTTTTTTTT	NA	False	NA	0	True	NA	NA	NA	64622169	64589612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16747.5	chr18	-	2796	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	-14	-723	-4	719	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTTGAGTTTTTTTT	NA	False	NA	0	True	NA	NA	NA	64622148	64589612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
ES.16747.7	chr18	-	6025	4	ISM	ENSMUSG00000024588.11	ENSMUST00000237502.2	2630	10	21407	-721	-3340	717	3prime_fragment	FALSE	canonical	3	260	junction_3	36.7090663944965	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTCTTTGAGTTTTTT	NA	False	NA	-2	True	NA	NA	NA	64600737	64589614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_64591786_64594591_64594757_64595177_64595286_64597156
ES.16747.8	chr18	-	2640	9	NIC	ENSMUSG00000024588.11	novel	2059	10	NA	NA	-5	711	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	134.499070628759	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAACATTTCTTTGAG	NA	False	NA	-8	True	NA	NA	NA	64622149	64589620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64611721_64611842_64621971
ES.16747.9	chr18	-	2817	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	22	3732	-5	615	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCTCTTCTATATTTG	NA	False	NA	-104	True	AATGAA	-38	NA	64622149	64589716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ES.16748.1	chr18	-	7730	9	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	4	1340	intron_retention	FALSE	canonical	3	3478	junction_8	641.487419498621	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACCATGACCAAGGC	NA	False	NA	NA	False	NA	NA	NA	64649575	64631377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.10	chr18	-	5674	11	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	1618.24197510755	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649584	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64636255_64636324_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.103	chr18	-	2591	16	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2031.33950770312	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649583	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634416_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648477_64649486
ES.16748.107	chr18	-	5202	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	3478	junction_11	564.401372332588	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649604	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.109	chr18	-	5387	15	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-7	intron_retention	FALSE	canonical	3	34	junction_13	1347.59900813806	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64647936_64648396_64648480_64649486
ES.16748.11	chr18	-	4331	12	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	3478	junction_11	577.03065790761	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649568	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634506_64634814_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.110	chr18	-	3718	12	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	2	-8	intron_retention	FALSE	canonical	3	2259	junction_11	883.667461106372	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAACCAAAACAC	NA	False	NA	NA	False	AATAAA	-12	NA	64649584	64632736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.113	chr18	-	2571	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1370.84874647581	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAACCAAAACAC	NA	False	NA	NA	False	AATAAA	-12	NA	64649570	64632736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634500_64634810_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.117	chr18	-	2295	14	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	-6	-190	combination_of_known_junctions	FALSE	canonical	2	58	junction_13	1357.82810390834	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACCTGAATCTTAGCC	NA	False	NA	NA	False	AGTAAA	-16	NA	64649557	64632918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64649486
ES.16748.118	chr18	-	4395	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-4	-192	intron_retention	FALSE	canonical	0	0	junction_5	1611.09793098057	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCACCTGAATCTTAG	NA	False	NA	NA	False	AGTAAA	-14	NA	64649603	64632920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.119	chr18	-	2413	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	125	207	1	-196	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTTGCACCTGAATC	NA	False	NA	NA	False	AGTAAA	-10	NA	64649598	64632924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.12	chr18	-	4128	11	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	2259	junction_10	926.408813645466	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649603	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.120	chr18	-	3438	13	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-4	-198	intron_retention	FALSE	canonical	3	2259	junction_12	847.960772808638	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGACTTTGCACCTGAA	NA	False	NA	NA	False	AGTAAA	-8	NA	64649603	64632926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.123	chr18	-	2220	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	51	416	-2	139	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTCTTTTCCTTAT	NA	False	NA	-2	True	CATAAA	-36	NA	64649628	64633144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.126	chr18	-	4262	12	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	1	137	intron_retention	FALSE	canonical	3	2259	junction_11	840.130774944154	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTAGTCTTTTCCTT	NA	False	NA	-4	True	CATAAA	-34	NA	64649568	64633146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.128	chr18	-	2180	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	0	565	0	1	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTCTGACATCCAGTAA	NA	False	NA	-9	True	AATAAA	-27	NA	64649723	64633282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.129	chr18	-	3451	12	NIC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	85	junction_9	1503.82506785555	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649575	64633283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ES.16748.132	chr18	-	2755	14	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	3478	junction_13	533.046330568502	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649585	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.133	chr18	-	3029	14	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	111	557	1	-2	intron_retention	FALSE	canonical	3	4499	junction_3	331.549152067512	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649568	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.135	chr18	-	2347	14	FSM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	-76	-3	2	-2	multi-exon	FALSE	canonical	3	3478	junction_13	534.16599817797	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649584	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.138	chr18	-	2009	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1338.00936514828	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649566	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648469_64649486
ES.16748.139	chr18	-	3594	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	3478	junction_10	596.753718044555	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649632	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.143	chr18	-	2039	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1461.21217675949	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649580	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643515_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.145	chr18	-	3077	13	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	3478	junction_12	554.799732385981	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649598	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.148	chr18	-	4056	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	4499	junction_2	350.449652129498	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649570	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.149	chr18	-	2085	16	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	1766.58751520803	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649584	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648477_64649486
ES.16748.151	chr18	-	2016	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1337.91481837391	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649568	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644687_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.152	chr18	-	2740	10	ISM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	4892	2	214	-2	intron_retention	FALSE	canonical	3	4499	junction_3	215.434674009158	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64644734	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523
ES.16748.153	chr18	-	4537	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	4499	junction_2	337.367074875241	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649568	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.154	chr18	-	3144	13	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	2259	junction_12	848.047905486477	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649603	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.157	chr18	-	2004	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1372.59314579286	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTCTGACATCCAG	NA	False	NA	-12	True	AATAAA	-24	NA	64649568	64633285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636675_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.16	chr18	-	3981	12	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	1	3	intron_retention	FALSE	canonical	3	2259	junction_11	885.437978191099	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTGCTGACTTATT	NA	False	NA	NA	False	AATAAA	-26	NA	64649568	64632722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.160	chr18	-	3356	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_6	1543.60438260585	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATGGTCTGACATCC	NA	False	NA	-14	True	AATAAA	-22	NA	64649584	64633287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.161	chr18	-	5683	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	4653	junction_3	313.677286394791	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649568	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.163	chr18	-	2038	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	1336.00873759821	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649270	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649169
ES.16748.164	chr18	-	2040	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1338.00936514828	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649568	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648501_64649486
ES.16748.165	chr18	-	2848	13	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	1481.30648040468	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649568	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64637545_64637914_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.166	chr18	-	3248	12	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	3478	junction_11	569.235096459558	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649598	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.167	chr18	-	5069	11	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	1682.91045810524	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649570	64633288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643623_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.169	chr18	-	2073	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1371.16699142276	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATGGTCTGACA	NA	False	NA	-17	True	AATAAA	-19	NA	64649626	64633290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640924_64642311_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.17	chr18	-	7400	9	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	2	1	intron_retention	FALSE	canonical	3	2259	junction_8	1015.95705341072	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACACTTTGCTGACTTA	NA	False	NA	NA	False	AATAAA	-24	NA	64649567	64632724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64638119_64638227_64638450_64640842_64640930_64642315_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.170	chr18	-	2096	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	0	7	0	-2	multi-exon	FALSE	canonical	3	85	junction_12	1341.18505510642	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTATGGTCTGACA	NA	False	NA	-17	True	AATAAA	-19	NA	64649626	64633290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ES.16748.173	chr18	-	2367	15	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	1	-8	intron_retention	FALSE	canonical	3	34	junction_13	1816.60726748676	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTTTTAATTATGGT	NA	False	NA	-23	True	AATAAA	-13	NA	64649568	64633296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648477_64649486
ES.16748.174	chr18	-	1975	15	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	-4	-8	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	1335.75867191339	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTTTTAATTATGGT	NA	False	NA	-23	True	AATAAA	-13	NA	64649603	64633296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649557
ES.16748.175	chr18	-	5318	11	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	1	-8	intron_retention	FALSE	canonical	3	2259	junction_10	921.034337036356	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTTTTAATTATGGT	NA	False	NA	-23	True	AATAAA	-13	NA	64649568	64633296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.177	chr18	-	3702	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	-9	intron_retention	FALSE	canonical	3	4499	junction_2	347.873231398978	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTTTTTAATTATGG	NA	False	NA	-24	True	AATAAA	-12	NA	64649570	64633297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.178	chr18	-	4418	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	-72	intron_retention	FALSE	canonical	3	4499	junction_2	349.487251331111	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGGAGATATTTTATTG	NA	False	NA	-87	True	AATATA	-44	NA	64649586	64633360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.179	chr18	-	1928	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1371.16699142276	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTCATGTCACTC	NA	False	NA	-110	True	AATATA	-21	NA	64649568	64633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642311_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.19	chr18	-	3314	14	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	3478	junction_13	533.046330568502	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649584	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.2	chr18	-	13683	5	NIC	ENSMUSG00000024587.11	novel	894	10	NA	NA	1	1308	intron_retention	FALSE	canonical	3	2259	junction_4	1334.15167334902	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-35	NA	64649568	64631409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.20	chr18	-	3957	13	NIC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	85	junction_11	1409.14064385592	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649606	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396
ES.16748.21	chr18	-	5376	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	4499	junction_1	355.478116567004	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649568	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64637545_64637918_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.22	chr18	-	6630	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	4653	junction_2	306.01379780076	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649578	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.23	chr18	-	6390	9	NIC	ENSMUSG00000024587.11	novel	1784	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	2259	junction_8	1026.0767210594	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649586	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.26	chr18	-	5780	9	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	4499	junction_1	352.836275771072	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649598	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.29	chr18	-	4553	13	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-6	0	intron_retention	FALSE	canonical	1	60	junction_9	1556.60509112691	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649605	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644768_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.3	chr18	-	3894	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	111	-1318	1	1307	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-34	NA	64649568	64631410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.32	chr18	-	3589	14	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	111	-3	1	0	intron_retention	FALSE	canonical	3	4499	junction_3	331.549152067512	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649568	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.34	chr18	-	5128	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	3478	junction_10	593.956235761525	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649578	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.36	chr18	-	4278	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	3478	junction_11	579.214415258266	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649586	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.37	chr18	-	3351	13	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	3478	junction_12	549.453889229013	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649575	64632725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.38	chr18	-	3637	13	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-4	1	intron_retention	FALSE	canonical	3	2259	junction_12	847.960772808638	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAACACTTTGCTGAC	NA	False	NA	NA	False	AATAAA	-21	NA	64649603	64632727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.39	chr18	-	3685	13	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	3478	junction_12	552.60933433022	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649584	64632728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.4	chr18	-	2875	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	99	-229	2	229	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAATGACTGATGGAAAC	NA	False	NA	NA	False	ATTAAA	-21	NA	64649624	64632488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.40	chr18	-	3564	13	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	4	0	intron_retention	FALSE	canonical	1	60	junction_9	1440.80396875803	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649595	64632728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644768_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.41	chr18	-	4736	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	6	0	intron_retention	FALSE	canonical	3	3478	junction_11	567.853446929824	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649563	64632728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.42	chr18	-	4873	14	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	1424.16979241702	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649584	64632728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64636255_64636324_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.43	chr18	-	3962	13	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	-2	intron_retention	FALSE	canonical	3	3478	junction_12	554.560505415475	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACCAAAACACTTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	64649584	64632730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634506_64634814_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.45	chr18	-	6115	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	-7	intron_retention	FALSE	canonical	3	4499	junction_2	366.188914342931	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.47	chr18	-	2622	16	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	1703.51520751129	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648480_64649486
ES.16748.49	chr18	-	2897	14	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	3	-7	intron_retention	FALSE	canonical	3	85	junction_11	1493.20638284704	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649566	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648477_64649486
ES.16748.50	chr18	-	2876	14	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_6	1418.69137133507	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649566	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638443_64640838_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.51	chr18	-	4093	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	3478	junction_10	591.98702688488	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649606	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.52	chr18	-	2698	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	117	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	1336.25880612207	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649380	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649169
ES.16748.56	chr18	-	2442	14	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1422.40118675944	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649570	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.57	chr18	-	2505	14	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	2	58	junction_13	1357.82810390834	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64649486
ES.16748.59	chr18	-	5229	12	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	1	-7	intron_retention	FALSE	canonical	3	3478	junction_11	562.314344017297	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.6	chr18	-	4763	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	3478	junction_9	629.025701647662	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649582	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.60	chr18	-	2586	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1475.65758603563	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637562_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.61	chr18	-	2556	15	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	1	40	junction_14	1328.00805259422	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649626	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649557
ES.16748.62	chr18	-	2531	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2045.63405668696	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649566	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643584_64644677_64644772_64644855_64644922_64645049_64645122_64648396_64648477_64649486
ES.16748.63	chr18	-	3890	13	ISM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	-62	-553	0	-7	intron_retention	FALSE	canonical	3	4499	junction_2	343.350727714712	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649570	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.64	chr18	-	2633	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1338.00936514828	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649604	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648505_64649486
ES.16748.67	chr18	-	4441	11	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	2259	junction_10	925.672301627309	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649588	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634506_64634814_64634947_64636578_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.68	chr18	-	2572	15	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1471.48717116323	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634386_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.69	chr18	-	3214	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_2	1610.99936685276	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64634947_64636578_64636693_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.7	chr18	-	2734	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	9	2	9	-2	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649714	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.74	chr18	-	2596	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1370.84874647581	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634806_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.75	chr18	-	5014	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	4499	junction_2	353.957977731821	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649604	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396
ES.16748.8	chr18	-	2929	14	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	2259	junction_13	814.730586754961	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649603	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.80	chr18	-	3887	11	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_6	2016.03373235668	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649570	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634947_64636578_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64644681_64644768_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.83	chr18	-	5718	10	NIC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_1	2153.74122957021	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649583	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64637545_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ES.16748.84	chr18	-	2436	13	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	-3	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	1418.87707947752	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649582	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.87	chr18	-	2586	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1338.00936514828	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649575	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648487_64649486
ES.16748.89	chr18	-	2637	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	14	-548	4	-7	multi-exon	FALSE	canonical	3	85	junction_12	1341.18505510642	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649612	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ES.16748.9	chr18	-	3022	13	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	3478	junction_12	549.557871535534	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGCTGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	64649584	64632719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.90	chr18	-	851	2	NNC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633538_64649535
ES.16748.93	chr18	-	2557	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	1336.50887748336	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649517
ES.16748.94	chr18	-	2558	12	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_3	1654.67603380828	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649584	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634947_64636578_64636693_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.95	chr18	-	6291	10	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	3478	junction_9	617.479544320556	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649603	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16748.96	chr18	-	3285	13	NNC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_4	1587.86381657874	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649570	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64638150_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ES.16748.97	chr18	-	2457	14	NIC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	1837.283075792	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649568	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ES.16748.99	chr18	-	5860	11	NIC	ENSMUSG00000024587.11	novel	2268	14	NA	NA	4	-7	intron_retention	FALSE	canonical	3	3478	junction_10	589.741502694189	2743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	False	NA	NA	False	AATAAA	-13	NA	64649546	64632735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ES.16749.1	chr18	-	155	1	Intergenic	novelGene_13951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	64763897	64763742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64763700_64763900
ES.1675.1	chr1	-	213	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGACTTTGATGGAG	6848	False	NA	NA	False	NA	NA	NA	156424067	156423854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156423900_156424100
ES.16750.1	chr18	-	220	1	Intergenic	novelGene_13952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAATGTACAGA	NA	False	NA	NA	False	NA	NA	NA	64776006	64775786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_64775800_64776000
ES.16751.1	chr18	+	237	1	Intergenic	novelGene_13953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCAAACCCTATAT	NA	False	NA	NA	False	AGTAAA	-22	NA	64832436	64832673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_64832400_64832700
ES.16752.1	chr18	-	176	1	ISM	ENSMUSG00000114210.3	ENSMUST00000224731.3	3431	2	3079	762	3079	-762	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	65018483	65018307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_65018300_65018500
ES.16753.1	chr18	+	3678	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-404	1528	-151	8	multi-exon	TRUE	canonical	3	102	junction_13	18.1799042339286	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTAATCACGCTACAG	NA	False	NA	NA	False	AATAAA	-30	NA	65020624	65346270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.10	chr18	+	3867	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-249	1184	4	139	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTTTTTTGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	65020779	65346614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.11	chr18	+	3187	27	NIC	ENSMUSG00000024589.19	novel	2917	28	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	31.6471158374409	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	65020779	65346384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.13	chr18	+	3663	31	NIC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	38.8759994512467	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTGGAAAAGTGAGCAT	NA	False	NA	3	True	ATTAAA	-11	NA	65020799	65346376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65314553_65314608_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.14	chr18	+	730	5	NNC	ENSMUSG00000024589.19	novel	2917	28	NA	NA	25	260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.6313619522999	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCAGATGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	65020800	65213373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213204
ES.16753.15	chr18	+	8114	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-227	-3085	26	-16	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACATTTCCTACATAAG	NA	False	NA	NA	False	AATAAA	-14	NA	65020801	65350883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.19	chr18	+	3585	31	NNC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.2752569168734	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAATGAATGGAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	65020825	65346258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65222804_65222921_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341184_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.2	chr18	+	3717	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-321	1406	-68	0	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTTTTTTTTGTATTT	NA	False	NA	19	True	ATTAAA	-27	NA	65020707	65346392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.20	chr18	+	2942	27	NNC	ENSMUSG00000024589.19	novel	4802	30	NA	NA	53	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	32.3811664525601	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAATGAATGGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	65020828	65346257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291004_65305397_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.21	chr18	+	3679	31	NNC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37.3244632319817	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	65020828	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65021167_65060060_65060148_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.25	chr18	+	3244	30	NIC	ENSMUSG00000024589.19	novel	7787	30	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.7407169170712	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAATGAATGGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	65022021	65346257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65022143_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.26	chr18	+	162	1	Intergenic	novelGene_13956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAAATAAATAAAATT	2104	False	NA	NA	False	NA	NA	NA	65053124	65053286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65053100_65053300
ES.16753.27	chr18	+	198	1	Intergenic	novelGene_13957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65071237	65071435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65071200_65071400
ES.16753.28	chr18	+	4106	1	Intergenic	novelGene_13959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-26	NA	65170904	65175010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65170900_65175000
ES.16753.29	chr18	+	3410	29	NIC	ENSMUSG00000024589.19	novel	3295	30	NA	NA	20	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.2489183486274	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	5675	False	NA	11	True	ATTAAA	-19	NA	65184009	65346384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65184244_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.3	chr18	+	3608	31	NNC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37.3244632319817	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAATGACAATGAATGGA	NA	False	NA	NA	False	AATAAA	-14	NA	65020765	65346254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65021167_65060060_65060148_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.30	chr18	+	3060	26	ISM	ENSMUSG00000024589.19	ENSMUST00000224663.3	4875	28	2586	1752	2383	0	3prime_fragment	FALSE	canonical	3	102	junction_9	18.0645066359422	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	65213087	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.31	chr18	+	3123	26	NNC	ENSMUSG00000024589.19	novel	2018	17	NA	NA	-29417	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	32.122615086571	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	23	False	NA	15	True	ATTAAA	-23	NA	65247211	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65247330_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.33	chr18	+	2989	26	NNC	ENSMUSG00000024589.19	novel	2018	17	NA	NA	-29414	1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	32.122615086571	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAATGAATGGAATT	26	False	NA	NA	False	AATAAA	-17	NA	65247214	65346257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65247330_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.34	chr18	+	2450	20	ISM	ENSMUSG00000024589.19	ENSMUST00000236103.2	3182	27	107009	4	2194	-4	3prime_fragment	FALSE	canonical	1	1	junction_4	36.1109401705356	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	65290998	65346384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.35	chr18	+	4545	16	ISM	ENSMUSG00000024589.19	ENSMUST00000236103.2	3182	27	120563	0	-2585	0	3prime_fragment	FALSE	canonical	3	118	junction_11	17.0077106696411	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	1606	False	NA	15	True	ATTAAA	-23	NA	65304552	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.36	chr18	+	1789	13	NNC	ENSMUSG00000024589.19	novel	550	7	NA	NA	5810	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.6693873549511	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGAGCATATTTTTT	NA	False	NA	10	True	ATTAAA	-18	NA	65320025	65346383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65320228_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.37	chr18	+	1035	6	ISM	ENSMUSG00000024589.19	ENSMUST00000237818.2	550	7	1662	-464	-2	-4	3prime_fragment	FALSE	canonical	3	118	junction_1	23.3632189562997	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGCATATTTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	65338597	65346384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.4	chr18	+	3674	31	NIC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	38.9433206368207	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAATGAATGGAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	65020765	65346258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65156911_65157061_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.5	chr18	+	3801	31	NIC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	38.9433206368207	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	65020768	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65156911_65157061_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.6	chr18	+	3324	29	NIC	ENSMUSG00000024589.19	novel	4802	30	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	31.3455681533633	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAATGAATGGAATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	65020770	65346260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16753.7	chr18	+	3452	29	NIC	ENSMUSG00000024589.19	novel	4802	30	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	31.3455681533633	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	65020770	65346388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ES.16754.1	chr18	-	179	1	Intergenic	novelGene_13954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	65024921	65024742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65024700_65024900
ES.16755.1	chr18	-	209	1	Intergenic	novelGene_13955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATTCCTAGGCAA	NA	False	NA	NA	False	NA	NA	NA	65027206	65026997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65027000_65027200
ES.16756.1	chr18	-	171	1	Intergenic	novelGene_13958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGCATGTT	4254	False	NA	NA	False	NA	NA	NA	65099791	65099620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65099600_65099800
ES.16757.1	chr18	-	4141	2	Antisense	novelGene_ENSMUSG00000024589.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAATAATCAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	65139695	65135505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65138133_65138181
ES.16758.1	chr18	-	3513	1	Antisense	novelGene_ENSMUSG00000024589.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCCAA	5328	False	NA	NA	False	TTTAAA	-43	NA	65302426	65298913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65298900_65302400
ES.16759.1	chr18	-	6854	1	Antisense	novelGene_ENSMUSG00000024589.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTAGGCATCTGACCTT	3912	False	NA	NA	False	NA	NA	NA	65318233	65311379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65311400_65318200
ES.1676.1	chr1	-	186	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGGG	5666	False	NA	NA	False	NA	NA	NA	156425249	156425063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156425100_156425200
ES.16760.1	chr18	-	159	1	Intergenic	novelGene_13960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGTATATATATATATAT	1740	False	NA	NA	False	NA	NA	NA	65414659	65414500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65414500_65414700
ES.16761.1	chr18	-	230	1	Intergenic	novelGene_13961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAGTGGGATTTGAACA	NA	False	NA	NA	False	NA	NA	NA	65522977	65522747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65522700_65523000
ES.16762.1	chr18	+	8466	18	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	-4	-198	intron_retention	FALSE	canonical	0	0	junction_9	10.3130917571646	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGAGTACTAGCTGAG	NA	False	NA	79	True	TATAAA	-9	NA	65564004	65611940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65589907_65590638_65590793_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.10	chr18	+	5202	19	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	11	-260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.7814459696509	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCAGTTTTTGATAACT	NA	False	NA	17	True	TATAAA	-2	NA	65564043	65611878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65589848_65589907_65591239_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.11	chr18	+	6156	17	NIC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	11	423	intron_retention	FALSE	canonical	0	0	junction_9	9.08639092269312	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTGCTTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	65564043	65609823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65589907_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.12	chr18	+	5196	19	NIC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	-14	-266	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	11.5219864971066	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATGCCCAGTTTTTG	NA	False	NA	11	True	AATACA	-17	NA	65564064	65611872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65589827_65589907_65591239_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.13	chr18	+	2907	17	NIC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	-14	420	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.2387096123176	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTTTTGCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	65564064	65609820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65608203_65608330_65609058
ES.16762.15	chr18	+	5279	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	100	-1266	27	4	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCATGAAGTTTGAACA	NA	False	NA	NA	False	AATAAA	-21	NA	65564108	65612142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.16	chr18	+	3239	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	102	772	29	704	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTATTTTATTTATGTG	NA	False	NA	NA	False	AAAAAG	-18	NA	65564110	65610104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.17	chr18	+	178	1	Intergenic	novelGene_13963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGCAGAAGCA	313	False	NA	NA	False	NA	NA	NA	65588432	65588610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65588400_65588600
ES.16762.18	chr18	+	177	1	Intergenic	novelGene_13964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAGAAATACA	2010	False	NA	NA	False	NA	NA	NA	65590129	65590306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65590100_65590300
ES.16762.19	chr18	+	4121	8	ISM	ENSMUSG00000032688.10	ENSMUST00000049248.7	5331	16	27195	3	-316	-3	3prime_fragment	FALSE	canonical	3	12	junction_3	8.82251294665401	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCTTTTTCATGAAGT	3095	False	NA	NA	False	AATAAA	-14	NA	65591214	65612135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.2	chr18	+	5191	16	NIC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.29850645115775	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTTTCATGAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	65564033	65612137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65608203_65608330_65609058
ES.16762.20	chr18	+	2330	1	ISM	ENSMUSG00000032688.10	ENSMUST00000049248.7	5331	16	45338	451	5929	-451	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAATGCATATTT	NA	False	NA	NA	False	NA	NA	NA	65609357	65611687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65609400_65611700
ES.16762.3	chr18	+	3038	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	27	1048	3	428	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTTTGTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	65564035	65609828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.4	chr18	+	5122	16	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	4	-242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7505038641607	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCTTGAAGACGCATG	NA	False	NA	35	True	TATAAA	-20	NA	65564036	65611896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564645_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65608203_65608330_65609058
ES.16762.5	chr18	+	9339	17	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	7	-264	intron_retention	FALSE	canonical	0	0	junction_1	11.3851259874452	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCCCAGTTTTTGAT	NA	False	NA	13	True	AATACA	-19	NA	65564039	65611874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564201_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.6	chr18	+	5147	18	NIC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	8	-260	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	9.86097126683064	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCAGTTTTTGATAACT	NA	False	NA	17	True	TATAAA	-2	NA	65564040	65611878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.7	chr18	+	5156	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	32	-1075	8	-187	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTGAGCATGCATAGTT	NA	False	NA	90	True	TATAAA	-20	NA	65564040	65611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.8	chr18	+	5548	19	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	8	-243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.7814459696509	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTCTTGAAGACGCAT	NA	False	NA	34	True	TATAAA	-19	NA	65564040	65611895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65589522_65589907_65591239_65591444_65592745_65592810_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ES.16762.9	chr18	+	4914	16	NNC	ENSMUSG00000032688.10	novel	4113	17	NA	NA	11	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.115774260475	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCCCAGTTTTTGAT	NA	False	NA	13	True	AATACA	-19	NA	65564043	65611874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582649_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65608203_65608330_65609058
ES.16763.1	chr18	+	111	2	Intergenic	novelGene_13967	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCAACAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	65645064	65682068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65645146_65682038
ES.16763.2	chr18	+	166	1	Intergenic	novelGene_13969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	65671027	65671193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65671000_65671200
ES.16764.1	chr18	+	5590	7	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-13974	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7790286185761	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	677	False	NA	NA	False	AATAAA	-20	NA	65699008	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65699128_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.10	chr18	+	5777	10	FSM	ENSMUSG00000042439.14	ENSMUST00000235493.2	5358	10	-24	-395	-17	0	multi-exon	FALSE	canonical	1	1	junction_1	25.9648385226285	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65713328	65822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65713582_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.11	chr18	+	5454	6	FSM	ENSMUSG00000042439.14	ENSMUST00000049016.12	5503	6	39	10	-6	-10	multi-exon	FALSE	canonical	1	1	junction_1	37.5520971451662	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAATAACATAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	65713339	65822504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65713582_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.12	chr18	+	5317	8	ISM	ENSMUSG00000042439.14	ENSMUST00000235493.2	5358	10	203	3626	103	-740	5prime_fragment	FALSE	canonical	1	1	junction_1	19.4033449672567	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65713555	65817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65713582_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965
ES.16764.13	chr18	+	6087	10	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	217	13	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	22.2660678562196	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTGGTGGGTCTCTGA	NA	False	NA	22	True	AATAAA	-35	NA	65713669	65822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.14	chr18	+	6404	10	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	22.2660678562196	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713841	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.15	chr18	+	5112	6	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-74	14	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	33.5952377577537	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTGGTGGGTCTCTGAC	NA	False	NA	23	True	AATAAA	-36	NA	65713841	65822026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.16	chr18	+	5940	11	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	30.7227928417974	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65713841	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65738402_65738442_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.17	chr18	+	5717	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-55	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.5245802591944	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTCTTCAAGAGAGTT	NA	False	NA	6	True	AATAAA	-19	NA	65713860	65822009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.18	chr18	+	4971	6	NNC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	34.190057034173	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTCTTCAAGAGAGTT	NA	False	NA	6	True	AATAAA	-19	NA	65713860	65822009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714220_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820137
ES.16764.19	chr18	+	5928	8	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-52	-9	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	29.7314510859034	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAACATAGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	65713863	65822505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.2	chr18	+	4729	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-13974	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2137418384109	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	677	False	NA	9	True	AATAAA	-22	NA	65699008	65822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65699128_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.20	chr18	+	5158	7	NIC	ENSMUSG00000042439.14	novel	5003	6	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	36.5224436324966	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65713863	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.21	chr18	+	5561	6	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	33.5952377577537	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713880	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.22	chr18	+	3322	3	FSM	ENSMUSG00000042439.14	ENSMUST00000182319.9	508	3	-208	-2606	-33	524	multi-exon	FALSE	canonical	3	18	junction_1	13.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTTTGAGGTGAAGTA	NA	False	NA	NA	False	AATAAA	-14	NA	65713882	65758929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65714220_65715967_65716078_65756054
ES.16764.23	chr18	+	5642	7	NIC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	36.5224436324966	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713882	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.24	chr18	+	4746	7	NIC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	-33	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	36.5224436324966	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTCTGCAACTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	65713882	65821618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.25	chr18	+	6077	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	30.3374253192323	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713886	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65815965_65816079_65818595_65818762_65820032
ES.16764.26	chr18	+	5405	8	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-27	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	29.7314510859034	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65713888	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.27	chr18	+	5922	10	NNC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.6647769672623	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713904	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714220_65715967_65716078_65756054_65757983_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789708_65815965_65816079_65818595_65818762_65820032
ES.16764.28	chr18	+	5716	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	26.7298405345038	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65713916	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.29	chr18	+	6077	12	NNC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.6278650203125	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65713919	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714220_65715258_65715434_65715797_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.3	chr18	+	6188	8	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-3771	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.5280860441311	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAACATAGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	65709211	65822505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65709656_65756054_65758406_65771820_65772003_65777263_65777441_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.30	chr18	+	5766	11	NNC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	28.5208695519614	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCTTCAAGAGAGTTA	NA	False	NA	7	True	AATAAA	-20	NA	65713953	65822010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820137
ES.16764.31	chr18	+	5774	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	35.4929570478426	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65714065	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65738402_65738442_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.32	chr18	+	7440	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	18	junction_1	22.0818788829212	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65714076	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595
ES.16764.33	chr18	+	5270	9	NIC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	32.9277143907682	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGAGCTTCTTCAAGA	NA	False	NA	1	True	AATAAA	-14	NA	65714103	65822004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715797_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.34	chr18	+	6906	9	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	13	3	intron_retention	FALSE	canonical	3	18	junction_1	22.0818788829212	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65714103	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595
ES.16764.35	chr18	+	3513	5	NNC	ENSMUSG00000042439.14	novel	554	4	NA	NA	-97	532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5539753152795	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTGAAGTACAGGTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	65714417	65758937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714644_65715258_65715470_65715797_65715881_65715967_65716078_65756054
ES.16764.36	chr18	+	6140	10	NNC	ENSMUSG00000042439.14	novel	4460	11	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.2000848175048	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAACATAGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	65714520	65822505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714644_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.37	chr18	+	5860	8	NIC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	34.0120026833265	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65714776	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714970_65715967_65716078_65756054_65758406_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.38	chr18	+	6215	10	NIC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	24.590472911774	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65714780	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714970_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.39	chr18	+	5795	11	NNC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.9029779174296	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65714784	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714970_65715797_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789708_65815965_65816079_65818595_65818762_65820032
ES.16764.4	chr18	+	5823	10	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-3621	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.9648385226285	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGAGTTATTGGTGG	NA	False	NA	14	True	AATAAA	-27	NA	65709361	65822017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65709656_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.40	chr18	+	6963	9	NIC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-18	1	intron_retention	FALSE	canonical	2	7	junction_1	24.5407823836161	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGAGCTTCTTCAAGAG	NA	False	NA	2	True	AATAAA	-15	NA	65714794	65822005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65714970_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595
ES.16764.41	chr18	+	5795	12	NNC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.7640984276497	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65714812	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714859_65715286_65715434_65715797_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.42	chr18	+	5722	10	NNC	ENSMUSG00000042439.14	novel	2618	3	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	30.1518789210413	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65714850	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65714970_65715967_65716078_65756054_65757983_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.43	chr18	+	6155	10	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	23.9294229757138	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65715340	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.44	chr18	+	6119	10	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	25.0412006180826	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65715340	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715434_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.45	chr18	+	5632	10	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	23.9294229757138	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65715361	65822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.46	chr18	+	5293	6	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	36.5458615988185	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65715362	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715434_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.47	chr18	+	4826	6	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.3496817524571	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65715362	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.48	chr18	+	5523	10	NNC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	26.7032156939021	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65715364	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65715470_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820137
ES.16764.49	chr18	+	5315	6	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.3496817524571	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65715376	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715470_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.5	chr18	+	5386	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-3605	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.6263137930805	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65709377	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65709652_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.50	chr18	+	4767	6	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	36.5458615988185	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGAGCTTCTTCAAGA	NA	False	NA	1	True	AATAAA	-14	NA	65715378	65822004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715434_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.51	chr18	+	5574	10	NIC	ENSMUSG00000042439.14	novel	5175	10	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	25.0412006180826	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTCAAGAGAGTTATTG	NA	False	NA	10	True	AATAAA	-23	NA	65715384	65822013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65715434_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.52	chr18	+	5199	7	NNC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	-23	2	intron_retention	FALSE	canonical	0	0	junction_2	40.6793013159709	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTCTTCAAGAGA	NA	False	NA	3	True	AATAAA	-16	NA	65715465	65822006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65715881_65715967_65716078_65731668_65731739_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.53	chr18	+	5876	10	FSM	ENSMUSG00000042439.14	ENSMUST00000237553.2	5175	10	365	-1066	32	0	multi-exon	FALSE	canonical	3	9	junction_1	24.1476937016998	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGAGCTTCTTCAAGA	NA	False	NA	1	True	AATAAA	-14	NA	65715520	65822004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.54	chr18	+	6110	10	FSM	ENSMUSG00000042439.14	ENSMUST00000237553.2	5175	10	641	-1576	113	0	multi-exon	FALSE	canonical	3	9	junction_1	24.1476937016998	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65715796	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.55	chr18	+	5212	5	ISM	ENSMUSG00000042439.14	ENSMUST00000169679.8	5003	6	370	-492	283	-11	3prime_fragment	FALSE	canonical	3	18	junction_2	32.1976319004985	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAAAAAATAACATAGT	NA	False	NA	NA	False	AATAAA	-9	NA	65715966	65822503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.56	chr18	+	5490	9	NIC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	30	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.2416845110577	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTCTTCAAGAGA	NA	False	NA	3	True	AATAAA	-16	NA	65717037	65822006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65717120_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.57	chr18	+	6012	9	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.9849495089392	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65717148	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.58	chr18	+	5208	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.6263137930805	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65717148	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.59	chr18	+	4699	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	144	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.6263137930805	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTTCTTCAAGAGAGT	NA	False	NA	5	True	AATAAA	-18	NA	65717151	65822008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.6	chr18	+	5668	9	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-3586	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.9849495089392	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65709396	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65709652_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.60	chr18	+	5047	7	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	153	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	35.3101338931978	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTCTTCAAGAGA	NA	False	NA	3	True	AATAAA	-16	NA	65717160	65822006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65756054_65758406_65771820_65772003_65777263_65777441_65815965_65816079_65818595_65818762_65820032
ES.16764.61	chr18	+	4921	4	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	159	36	intron_retention	FALSE	canonical	1	2	junction_1	43.8583578757294	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGTGTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	65717166	65820974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65756054_65758406_65815965_65816079_65818595
ES.16764.62	chr18	+	3623	8	NNC	ENSMUSG00000042439.14	novel	6708	11	NA	NA	170	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0608088711395	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAACATAGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	65717177	65822505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717245_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.63	chr18	+	5351	9	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	186	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.1537725666292	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65717193	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65717241_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820137
ES.16764.64	chr18	+	7066	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	3507	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2137418384109	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65720514	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65722469_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.65	chr18	+	5332	9	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	3515	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1537725666292	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65720522	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65720547_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820137
ES.16764.66	chr18	+	2863	1	Intergenic	novelGene_13971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATATGAACCTGGA	NA	False	NA	NA	False	NA	NA	NA	65733119	65735982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_65733100_65736000
ES.16764.67	chr18	+	6042	9	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-18646	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAATAACATAGTC	NA	False	NA	NA	False	AATAAA	-10	NA	65739562	65822504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65739699_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.68	chr18	+	6082	5	NNC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-8552	3	intron_retention	FALSE	canonical	0	0	junction_1	42.2137418384109	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGCTTCTTCAAGAGAG	NA	False	NA	4	True	AATAAA	-17	NA	65749656	65822007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65749718_65750843_65750989_65756054_65758406_65815965_65816079_65818595
ES.16764.69	chr18	+	4921	7	NNC	ENSMUSG00000042439.14	novel	5471	8	NA	NA	-1912	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.8901922226144	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGAGCTTCTTCAAGAG	NA	False	NA	2	True	AATAAA	-15	NA	65756296	65822005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65758406_65771820_65772003_65777263_65777441_65779873_65780075_65815965_65816079_65818595_65818762_65820032
ES.16764.70	chr18	+	4884	5	NIC	ENSMUSG00000042439.14	novel	3580	7	NA	NA	-1644	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.9563894489452	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65756564	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65758406_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.71	chr18	+	4453	8	NNC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-973	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.0172362570938	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTTCAAGAGAGTTAT	NA	False	NA	8	True	AATAAA	-21	NA	65757235	65822011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_65758406_65771820_65772003_65777263_65777441_65784630_65785015_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.72	chr18	+	3704	7	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-625	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.5577072818811	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTTCTTCAAGAGAGT	NA	False	NA	5	True	AATAAA	-18	NA	65757583	65822008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65758406_65771820_65772003_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16764.73	chr18	+	1535	2	Genic_Genomic	ENSMUSG00000117775.2	novel	2678	1	NA	NA	1971	1031	multi-exon	TRUE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAAAGCCGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	65769834	65771572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_65770680_65770882
ES.16764.74	chr18	+	4054	3	ISM	ENSMUSG00000042439.14	ENSMUST00000182478.8	5471	8	61930	-502	-2545	0	intron_retention	FALSE	canonical	3	13	junction_1	44.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65777418	65822514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65777441_65815965_65816079_65818595
ES.16764.75	chr18	+	5596	1	NIC	ENSMUSG00000042439.14	novel	6708	11	NA	NA	32432	-740	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6264	False	NA	NA	False	NA	NA	NA	65812395	65817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65812400_65818000
ES.16764.76	chr18	+	4765	2	NIC	ENSMUSG00000042439.14	novel	5503	6	NA	NA	36010	-2	intron_retention	FALSE	canonical	3	80	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTCTTCAAGAGAGTT	1329	False	NA	6	True	AATAAA	-19	NA	65815973	65822009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65818762_65820032
ES.16764.8	chr18	+	4973	6	FSM	ENSMUSG00000042439.14	ENSMUST00000049016.12	5503	6	28	502	-17	0	multi-exon	FALSE	canonical	1	1	junction_1	37.5520971451662	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65713328	65822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65713582_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ES.16764.9	chr18	+	5667	9	NIC	ENSMUSG00000042439.14	novel	5358	10	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65713328	65822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65713582_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ES.16765.1	chr18	-	176	2	Intergenic	novelGene_13962	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACGACGACC	NA	False	NA	NA	False	NA	NA	NA	65732471	65582818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65582836_65732312
ES.16765.10	chr18	-	3088	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	65719387	65716258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65718737_65718777
ES.16765.11	chr18	-	5061	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	65721360	65716258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65718726_65718766
ES.16765.12	chr18	-	2802	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65734068	65731084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65732285_65732466
ES.16765.13	chr18	-	178	1	Intergenic	novelGene_13970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	65732472	65732294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65732300_65732500
ES.16765.14	chr18	-	3132	1	Intergenic	novelGene_13972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACTGTGAGTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	65742273	65739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65739100_65742300
ES.16765.15	chr18	-	4870	1	Intergenic	novelGene_13973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTACCAGGAGACATGCA	2317	False	NA	NA	False	NA	NA	NA	65764772	65759902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65759900_65764800
ES.16765.16	chr18	-	6282	2	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCTTCATCTGAAAG	NA	False	NA	NA	False	NA	NA	NA	65774345	65767860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65770674_65770876
ES.16765.18	chr18	-	5255	3	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCCTTCATCTGA	NA	False	NA	NA	False	NA	NA	NA	65778582	65767863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65770674_65770876_65772001_65777261
ES.16765.19	chr18	-	4926	2	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCCTTCATCTGA	NA	False	NA	NA	False	NA	NA	NA	65772990	65767863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65770682_65770882
ES.16765.2	chr18	-	411	1	Intergenic	novelGene_13965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65615541	65615130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65615100_65615500
ES.16765.21	chr18	-	3221	3	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65777394	65768709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65770674_65770876_65772001_65777261
ES.16765.22	chr18	-	5433	2	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65774345	65768709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65770674_65770876
ES.16765.23	chr18	-	177	1	Intergenic	novelGene_13974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	65770873	65770696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65770700_65770900
ES.16765.24	chr18	-	175	1	Intergenic	novelGene_13975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAATCAGACCC	2781	False	NA	NA	False	NA	NA	NA	65795705	65795530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65795500_65795700
ES.16765.3	chr18	-	178	1	Intergenic	novelGene_13966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	65621451	65621273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65621300_65621500
ES.16765.4	chr18	-	401	2	Intergenic	novelGene_13968	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTCTCTGAATATT	NA	False	NA	NA	False	NA	NA	NA	65673073	65666161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_65666216_65672726
ES.16765.5	chr18	-	5731	2	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAGTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65778582	65700175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65700317_65772992
ES.16765.6	chr18	-	5127	1	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTGGAACCCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	65721360	65716233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65716200_65721400
ES.16765.7	chr18	-	3112	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTGGAACCCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	65719386	65716233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65718748_65718788
ES.16765.8	chr18	-	5084	2	Antisense	novelGene_ENSMUSG00000042439.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTGGAACCCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	65721360	65716233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_65718751_65718793
ES.16765.9	chr18	-	5807	4	Genic_Genomic	ENSMUSG00000118234.2	novel	5267	1	NA	NA	-63619	36472	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	65821616	65716258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_65716577_65756052_65758404_65815963_65816079_65818593
ES.16766.1	chr18	+	840	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	2	18	2	1	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTGTGGCCTCTGAT	NA	False	NA	NA	False	AATAAA	-22	NA	65933587	65950737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ES.16766.2	chr18	+	2828	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	-4	5	0	0	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	65933616	65950731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
ES.16766.3	chr18	+	5937	4	NIC	ENSMUSG00000024516.14	novel	2829	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	355	junction_1	12.1197726417986	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTTGTGGCCTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	65933621	65950735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65933783_65942515_65948029_65949891_65949950_65950530
ES.16766.4	chr18	+	698	6	FSM	ENSMUSG00000024516.14	ENSMUST00000126432.9	737	6	31	8	5	0	multi-exon	FALSE	canonical	3	7	junction_3	146.338511677548	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGCTTCCTTTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	65933647	65950728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_65933783_65942515_65942626_65945735_65945813_65947908_65948029_65949891_65949950_65950530
ES.16766.5	chr18	+	4650	4	NIC	ENSMUSG00000024516.14	novel	821	7	NA	NA	15	0	intron_retention	FALSE	canonical	3	355	junction_1	12.1197726417986	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	65933657	65950731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65933783_65942515_65942626_65945735_65949950_65950530
ES.16766.6	chr18	+	3689	4	ISM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	7868	5	1854	0	3prime_fragment	FALSE	canonical	3	364	junction_3	9.42809041582063	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTTCCTTTTGTGGCC	NA	False	NA	NA	False	AATAAA	-16	NA	65941488	65950731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_65942626_65945735_65948029_65949891_65949950_65950530
ES.16766.7	chr18	+	4151	1	NIC	ENSMUSG00000024516.14	novel	860	6	NA	NA	-510	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGATGGCTTCCTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	65946574	65950725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_65946600_65950700
ES.16767.1	chr18	-	4450	1	FSM	ENSMUSG00000024518.5	ENSMUST00000237710.2	2856	1	-13	-1581	-1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCGTGCTCATCGACT	NA	False	NA	NA	False	ATTAAA	-18	NA	66072161	66067711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66067700_66072200
ES.16768.1	chr18	-	3401	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.750270502472	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTATCCTGCTGTC	NA	False	NA	-1	True	AATAAA	-36	NA	66135690	66113806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124462_66124714_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.10	chr18	-	5645	2	ISM	ENSMUSG00000041891.17	ENSMUST00000236292.2	1100	10	8687	-3506	3782	3	3prime_fragment	FALSE	canonical	3	989	junction_1	0	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66122949	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_66117346_66120825
ES.16768.11	chr18	-	9321	9	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-6	3	intron_retention	FALSE	canonical	3	864	junction_2	58.6609697754819	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135698	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66120977_66124402_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.12	chr18	-	9859	2	ISM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	11762	-3	2783	3	intron_retention	FALSE	canonical	3	1083	junction_1	0	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66123948	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_66116959_66117223
ES.16768.13	chr18	-	3541	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	273.588253666671	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135689	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126272_66126645_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.14	chr18	-	3568	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135692	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115803_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.17	chr18	-	7216	13	ISM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	2	16	2	3	intron_retention	FALSE	canonical	3	538	junction_1	130.183097554517	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135708	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636
ES.16768.18	chr18	-	3535	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	343.74076856889	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135690	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117229_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126275_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.19	chr18	-	3470	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	272.646898682062	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTTTCCTCCATTG	NA	False	NA	-20	True	AATAAA	-17	NA	66135690	66113825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135518
ES.16768.2	chr18	-	3616	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	-35	0	-35	0	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTCTGTATCCTGCTG	NA	False	NA	-3	True	AATAAA	-34	NA	66135745	66113808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.20	chr18	-	4652	13	NNC	ENSMUSG00000041891.17	novel	1741	14	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_6	269.60294879693	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135692	66113826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126272_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.21	chr18	-	4526	15	NNC	ENSMUSG00000041891.17	novel	1741	14	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	335.371595611282	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTTTTCCTCCATT	NA	False	NA	-21	True	AATAAA	-16	NA	66135690	66113826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66114667_66114741_66114830_66114885_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.22	chr18	-	4673	14	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135768	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116766_66116826_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.23	chr18	-	4585	14	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135698	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116779_66116857_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.24	chr18	-	4397	14	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135690	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115660_66115918_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.25	chr18	-	8407	11	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	864	junction_3	52.522471381305	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135696	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.26	chr18	-	3501	15	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.836655171803	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135699	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66114764_66114813_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.27	chr18	-	4294	14	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135688	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115596_66115955_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.28	chr18	-	3535	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	273.746827276202	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135689	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124753_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.29	chr18	-	3454	15	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.836655171803	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135690	66113827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66114764_66114851_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.3	chr18	-	4728	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	-39	-13	-39	-6	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTGATGTCTGTATC	NA	False	NA	-9	True	AATAAA	-28	NA	66135749	66113814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.30	chr18	-	4649	13	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	269.041921557878	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135690	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124462_66124558_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.31	chr18	-	3539	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	272.454197877053	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135711	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131659_66131792_66135444
ES.16768.32	chr18	-	3532	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.05495064874	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135690	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116904_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.34	chr18	-	3551	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	273.588253666671	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135694	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126285_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.35	chr18	-	3556	14	NNC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	270.68189150834	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135689	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66115782_66116895_66116959_66117223_66117362_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.36	chr18	-	4521	14	NNC	ENSMUSG00000041891.17	novel	1741	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.05495064874	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTTTTTTCCTCCA	NA	False	NA	-23	True	AATAAA	-14	NA	66135690	66113828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116060_66116193_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.37	chr18	-	5542	2	NNC	ENSMUSG00000041891.17	novel	1100	10	NA	NA	7268	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATTGGTTTTTTCCTC	NA	False	NA	-25	True	AATAAA	-12	NA	66119463	66113830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66119270_66119360
ES.16768.39	chr18	-	3447	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	14	120	-4	-101	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTTGGTTTTGTTT	NA	False	NA	-123	True	NA	NA	NA	66135696	66113928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.4	chr18	-	3772	3	ISM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	16735	16	7756	3	3prime_fragment	FALSE	canonical	3	538	junction_1	272.5	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66118975	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_66115782_66116895_66116959_66117223
ES.16768.40	chr18	-	4555	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	20	101	-1	-101	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTTGGTTTTGTTT	NA	False	NA	-123	True	NA	NA	NA	66135690	66113928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.41	chr18	-	3994	4	ISM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	11297	1752	2318	74	intron_retention	FALSE	canonical	3	538	junction_1	237.875317480958	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTGTGCAGTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	66124413	66115560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825
ES.16768.42	chr18	-	2149	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	20	2507	-1	-700	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACCAACTAGTTTCTT	NA	False	NA	NA	False	TTTAAA	-14	NA	66135690	66116334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.43	chr18	-	1939	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	11	2726	-7	777	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGAGCACCCTATTCA	NA	False	NA	NA	False	AATAAA	-31	NA	66135699	66116553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.44	chr18	-	1766	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	-6	2916	-6	587	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATGTCTTTAAATGTC	NA	False	NA	13	True	AATAAA	-31	NA	66135716	66116743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.45	chr18	-	1728	13	NNC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-7	572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.899418776666	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTCATAGTACTAC	NA	False	NA	-2	True	AATAAA	-16	NA	66135699	66116758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66116959_66117229_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.46	chr18	-	7150	11	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-1	571	intron_retention	FALSE	canonical	3	864	junction_5	67.0299186930732	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTTCATAGTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	66135690	66116759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66129853_66130670_66130733_66131445_66131554_66131636
ES.16768.48	chr18	-	5309	11	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	6	571	intron_retention	FALSE	canonical	3	864	junction_3	71.1941711097194	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTTCATAGTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	66135704	66116759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66116959_66117223_66120977_66124402_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.50	chr18	-	4954	11	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	-155	567	intron_retention	FALSE	canonical	3	864	junction_4	71.2362969279005	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACATTTTGTTCATAGT	NA	False	NA	-7	True	AATAAA	-11	NA	66131791	66116763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66116959_66117223_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636
ES.16768.51	chr18	-	3410	1	FSM	ENSMUSG00000041891.17	ENSMUST00000236070.2	2057	1	-2	-1351	1	1351	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTGCCTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	66135691	66132281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66132300_66135700
ES.16768.52	chr18	-	953	1	FSM	ENSMUSG00000041891.17	ENSMUST00000236070.2	2057	1	-10	1114	-7	-1114	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGAGATCATTT	NA	False	NA	NA	False	NA	NA	NA	66135699	66134746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66134700_66135700
ES.16768.6	chr18	-	5318	13	NIC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	-1	3	intron_retention	FALSE	canonical	3	538	junction_1	125.436460232085	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135690	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.7	chr18	-	3416	13	NIC	ENSMUSG00000041891.17	novel	3581	14	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	279.401580266747	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135685	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16768.9	chr18	-	6445	12	NIC	ENSMUSG00000041891.17	novel	4676	13	NA	NA	7	3	intron_retention	FALSE	canonical	3	864	junction_5	63.9116125197607	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	66135703	66113824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ES.16769.1	chr18	+	189	1	Intergenic	novelGene_13977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATGGGTTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	66357014	66357203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66357000_66357200
ES.1677.1	chr1	-	3292	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	-2	-5	-2	5	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTCCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	156501928	156481181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ES.1677.3	chr1	-	3352	7	NNC	ENSMUSG00000060519.12	novel	3355	7	NA	NA	33	0	intron_retention	FALSE	non_canonical	0	0	junction_4	25.9063484283079	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGATGGTTCTTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156501851	156481186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156500809_156500952_156501099_156501217_156501655
ES.1677.4	chr1	-	3301	7	FSM	ENSMUSG00000060519.12	ENSMUST00000150557.8	3355	7	54	0	12	0	multi-exon	FALSE	canonical	0	0	junction_3	24.5995709086335	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGATGGTTCTTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156501872	156481186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496683_156496754_156496940_156497207_156501099_156501217_156501655
ES.1677.6	chr1	-	2373	7	FSM	ENSMUSG00000060519.12	ENSMUST00000150557.8	3355	7	20	962	-1	444	multi-exon	FALSE	canonical	0	0	junction_3	24.5995709086335	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGGATCTCAATTAGCA	NA	False	NA	NA	False	AATAAA	-15	NA	156501906	156482148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496683_156496754_156496940_156497207_156501099_156501217_156501655
ES.1677.7	chr1	-	1897	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	-18	1406	-18	0	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTTTCTTACTGAGA	NA	False	NA	-10	True	ATTAAA	-15	NA	156501944	156482592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ES.1677.8	chr1	-	1378	4	NNC	ENSMUSG00000060519.12	novel	1750	7	NA	NA	-1910	0	intron_retention	FALSE	canonical	0	0	junction_3	27.4023518860861	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTTTCTTACTGAGA	NA	False	NA	-10	True	ATTAAA	-15	NA	156496210	156482592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156483514_156484041_156484167_156494168_156494348_156496057
ES.16770.1	chr18	+	2618	1	Intergenic	novelGene_13978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTCATAGCCAGACAG	NA	False	NA	NA	False	NA	NA	NA	66388059	66390677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66388100_66390700
ES.16771.1	chr18	-	5737	11	FSM	ENSMUSG00000046318.17	ENSMUST00000130300.3	6572	11	835	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	3.55527776692624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	66424903	66189925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_66194592_66198939_66198976_66199653_66199690_66199799_66199940_66204271_66204393_66209378_66209483_66216165_66216319_66217808_66217944_66227068_66227122_66424202_66424284_66424691
ES.16771.2	chr18	-	2751	5	NNC	ENSMUSG00000046318.17	novel	6572	11	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	3.77491721763537	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGCTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	66424876	66189926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_66192235_66217819_66217944_66227068_66227122_66424202_66424284_66424691
ES.16771.3	chr18	-	172	1	Intergenic	novelGene_13976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGGAAGTATCATA	NA	False	NA	NA	False	NA	NA	NA	66331377	66331205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66331200_66331400
ES.16772.1	chr18	+	176	1	Intergenic	novelGene_13979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATATATATAATGT	NA	False	NA	NA	False	NA	NA	NA	66500302	66500478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66500300_66500500
ES.16773.1	chr18	+	178	1	Intergenic	novelGene_13980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGCTGTCACAGAGCC	4941	False	NA	NA	False	NA	NA	NA	66514815	66514993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66514800_66515000
ES.16774.1	chr18	+	183	1	Intergenic	novelGene_13981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAAGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	66525167	66525350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66525200_66525400
ES.16775.1	chr18	-	299	1	Intergenic	novelGene_13982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGTAGCA	NA	False	NA	NA	False	AATAAA	-9	NA	66554439	66554140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66554100_66554400
ES.16775.2	chr18	-	170	1	Intergenic	novelGene_13983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGCAAGTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	66554439	66554269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66554300_66554400
ES.16776.1	chr18	-	203	1	Intergenic	novelGene_13984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTCATTCATTCATT	NA	False	NA	NA	False	NA	NA	NA	66569464	66569261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66569300_66569500
ES.16777.1	chr18	-	137	1	Intergenic	novelGene_13985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	66589408	66589271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66589300_66589400
ES.16778.1	chr18	+	2798	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	4	-75	4	70	multi-exon	FALSE	canonical	3	99	junction_2	7	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATAAGTACACTGTAGC	NA	False	NA	97	True	NA	NA	NA	66591607	66598706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_66591884_66593913_66594070_66596340
ES.16778.2	chr18	+	2611	3	FSM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	-40	-1559	20	74	multi-exon	FALSE	canonical	2	7	junction_1	46	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACACTGTAGCTGCC	NA	False	NA	101	True	NA	NA	NA	66591623	66598710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_66591709_66593913_66594070_66596340
ES.16778.3	chr18	+	1950	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	63	714	3	-714	multi-exon	FALSE	canonical	3	99	junction_2	7	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCCTCTCTTTATTTT	NA	False	NA	NA	False	AAAACA	-17	NA	66591666	66597917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_66591884_66593913_66594070_66596340
ES.16778.4	chr18	+	2638	3	NNC	ENSMUSG00000024521.9	novel	2727	3	NA	NA	3	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.5	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATTGAAAAATGCCACT	NA	False	NA	4	True	AATAAA	-16	NA	66591666	66598613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_66591884_66593913_66594070_66596348
ES.16778.5	chr18	+	2276	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	63	388	3	-388	multi-exon	FALSE	canonical	3	99	junction_2	7	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAATCTCACGATTAA	NA	False	NA	NA	False	NA	NA	NA	66591666	66598243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_66591884_66593913_66594070_66596340
ES.16779.1	chr18	-	137	1	Intergenic	novelGene_13986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	66598843	66598706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66598700_66598800
ES.1678.1	chr1	+	178	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTATTTGTTT	2960	False	NA	NA	False	NA	NA	NA	156503365	156503543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156503400_156503500
ES.16780.1	chr18	-	173	1	Intergenic	novelGene_13987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66629865	66629692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_66629700_66629900
ES.16781.1	chr18	+	181	1	Intergenic	novelGene_13988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAACGTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	66632618	66632799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_66632600_66632800
ES.16782.1	chr18	+	5209	12	NNC	ENSMUSG00000024524.18	novel	3470	12	NA	NA	62	0	intron_retention	FALSE	canonical	1	1	junction_1	3.44975744745641	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTTTCGGTTCCT	NA	False	NA	10	True	NA	NA	NA	67266154	67359863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67266286_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.10	chr18	+	2429	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	25	70	25	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTTCATTTCATAC	NA	False	NA	15	True	ATTAAA	-28	NA	67338461	67340890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67338500_67340900
ES.16782.11	chr18	+	5826	8	NNC	ENSMUSG00000024524.18	novel	5736	12	NA	NA	71642	0	intron_retention	FALSE	canonical	0	0	junction_1	4.23782770691181	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTTTCGGTTCCT	NA	False	NA	10	True	NA	NA	NA	67338462	67359863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67339557_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.12	chr18	+	1362	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	27	1135	27	-1135	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGAGTTCTTAAGCTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	67338463	67339825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67338500_67339800
ES.16782.13	chr18	+	2046	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	62	416	62	-416	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGACTCTCGGAGTTA	NA	False	NA	NA	False	AATGAA	-24	NA	67338498	67340544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67338500_67340500
ES.16782.2	chr18	+	5962	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	62	-2554	62	-3	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGGGTTGTTTCGGTT	NA	False	NA	7	True	NA	NA	NA	67266154	67359860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.3	chr18	+	5450	13	NNC	ENSMUSG00000024524.18	novel	3470	12	NA	NA	64	-3	intron_retention	FALSE	canonical	1	3	junction_1	2.92854723180093	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGGGTTGTTTCGGTT	NA	False	NA	7	True	NA	NA	NA	67266156	67359860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67266286_67266795_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.4	chr18	+	2959	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	515	-4	-213	4	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAGACCTGCAAATGCA	NA	False	NA	3	True	AATAAA	-17	NA	67266607	67357310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.5	chr18	+	4213	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	524	-1267	-204	1267	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGTTCCATTTTTATA	NA	False	NA	NA	False	ATTAAA	-24	NA	67266616	67358573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.6	chr18	+	2061	12	FSM	ENSMUSG00000024524.18	ENSMUST00000076605.9	3470	12	623	786	-105	734	multi-exon	FALSE	canonical	2	7	junction_3	2.38452309974618	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCATAGTCATTCCTAT	NA	False	NA	NA	False	TATAAA	-24	NA	67266715	67356520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ES.16782.7	chr18	+	651	4	ISM	ENSMUSG00000024524.18	ENSMUST00000236918.2	2555	5	7	6930	7	1961	5prime_fragment	FALSE	canonical	3	7	junction_3	0.816496580927726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGGTGTCTGTGTGGC	NA	False	NA	NA	False	AAGAAA	-5	NA	67266827	67268898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67267042_67267283_67267357_67268382_67268438_67268589
ES.16782.8	chr18	+	178	1	Antisense	novelGene_ENSMUSG00000118131.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	67284169	67284347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_67284200_67284300
ES.16782.9	chr18	+	1636	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	4	884	4	-884	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATGTATTATTTTG	NA	False	NA	17	True	AATAAA	-24	NA	67338440	67340076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67338400_67340100
ES.16783.1	chr18	-	2784	13	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-6596	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	16.6906078046574	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTTTGGATCTTTTCT	NA	False	NA	-1	True	GATAAA	-21	NA	67385497	67358115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452_67379003_67380014_67380136_67385427
ES.16783.10	chr18	-	5092	15	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-9857	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.3715487874634	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67388758	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360996_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452_67379003_67380014_67380136_67382021_67382435_67383207_67383260_67386887
ES.16783.11	chr18	-	3810	8	NIC	ENSMUSG00000062526.5	novel	2511	9	NA	NA	16	-6	intron_retention	FALSE	canonical	3	18	junction_7	13.3462522447162	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378332	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67358956_67359853_67360791_67360874_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
ES.16783.13	chr18	-	3088	9	FSM	ENSMUSG00000062526.5	ENSMUST00000236244.2	2511	9	65	-642	65	-6	multi-exon	FALSE	canonical	3	18	junction_8	12.4899959967968	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378283	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
ES.16783.14	chr18	-	3156	8	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-31	-6	intron_retention	FALSE	canonical	3	31	junction_5	9.02151623076968	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378543	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67358956_67359853_67359995_67360667_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ES.16783.15	chr18	-	2971	10	NNC	ENSMUSG00000062526.5	novel	2511	9	NA	NA	45	-6	intron_retention	FALSE	canonical	3	18	junction_4	13.4989711542111	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378303	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
ES.16783.16	chr18	-	3896	8	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	41	-6	intron_retention	FALSE	canonical	3	29	junction_3	10.2738026264944	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378697	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ES.16783.17	chr18	-	2880	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-23	-53	intron_retention	FALSE	canonical	3	18	junction_4	11.7756811551038	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATGATGTAATAATTC	NA	False	NA	-52	True	NA	NA	NA	67378535	67358166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ES.16783.18	chr18	-	161	1	Intergenic	novelGene_13989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAACCCTCTAATAC	NA	False	NA	NA	False	NA	NA	NA	67374300	67374139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67374100_67374300
ES.16783.2	chr18	-	3704	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-6577	-2	intron_retention	FALSE	canonical	0	0	junction_10	17.7676672638813	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTTTGGATCTTTTCT	NA	False	NA	-1	True	GATAAA	-21	NA	67385478	67358115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452_67379003_67380014_67380133_67385427
ES.16783.3	chr18	-	4097	2	NIC	ENSMUSG00000062526.5	novel	2046	7	NA	NA	15466	-2	intron_retention	FALSE	canonical	3	45	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTTTGGATCTTTTCT	NA	False	NA	-1	True	GATAAA	-21	NA	67362882	67358115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67362076_67362745
ES.16783.4	chr18	-	2026	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	15.4472419528736	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTTTGGATCTTTTC	NA	False	NA	-2	True	GATAAA	-20	NA	67378548	67358116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ES.16783.5	chr18	-	2118	11	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.3474768695356	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAGTTTGGATCTTTT	NA	False	NA	-3	True	GATAAA	-19	NA	67378533	67358117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360947_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370798_67377029_67377119_67378452
ES.16783.6	chr18	-	2433	10	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	26	-6	intron_retention	FALSE	canonical	3	25	junction_4	10.5280342976664	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378712	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ES.16783.9	chr18	-	2289	10	NNC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	1	-6	intron_retention	FALSE	canonical	1	2	junction_1	14.5686963582967	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	False	NA	-5	True	GATAAA	-17	NA	67378347	67358119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67358951_67359853_67359995_67360667_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378176
ES.16784.1	chr18	+	156	1	Intergenic	novelGene_13990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	67418286	67418442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67418300_67418400
ES.16785.1	chr18	-	346	1	Intergenic	novelGene_13991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAACTCATAG	NA	False	NA	NA	False	NA	NA	NA	67420434	67420088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67420100_67420400
ES.16786.1	chr18	+	1523	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	-83	3614	-83	1949	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTGGTTCTCAGGCAA	NA	False	NA	NA	False	AATAAA	-36	NA	67422172	67451928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.10	chr18	+	3902	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	5	1147	5	-1147	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGCGATTTGTTCTAG	NA	False	NA	35	True	NA	NA	NA	67422260	67454395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.11	chr18	+	4186	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	13	-985	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	514.036606335639	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGGCTGCTCCACA	NA	False	NA	NA	False	ATTAAA	-15	NA	67422268	67454557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443680_67443826_67448689_67448893_67449951_67450104_67451464
ES.16786.13	chr18	+	1472	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	25	1928	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	474.525223249513	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGGGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	67422280	67451907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439621_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.14	chr18	+	1177	6	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	25	1929	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	465.848473218492	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGGGTCTTCCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	67422280	67451908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67449951_67450104_67451464
ES.16786.15	chr18	+	4628	1	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	26	-1199	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTGTCCGTATTTGA	NA	False	NA	NA	False	AAAAAG	-8	NA	67422281	67426909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422300_67426900
ES.16786.16	chr18	+	1809	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	31	2308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	486.747303536445	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTGGAATTTTGGGG	NA	False	NA	29	True	CATAAA	-24	NA	67422286	67452287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67444305_67444347_67448689_67448799_67449951_67450104_67451464
ES.16786.17	chr18	+	3000	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	31	2189	intron_retention	FALSE	canonical	3	39	junction_2	420.200745676	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGAAGCCCACGTGTA	NA	False	NA	12	True	ATTAAA	-19	NA	67422286	67452168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.18	chr18	+	1511	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-33	1931	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	544.725102689421	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422288	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67428028_67428115_67435245_67435380_67439740_67439846_67442121_67442168_67443680_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.19	chr18	+	1587	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-33	1931	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	389.0304536634	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422288	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.2	chr18	+	5071	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	-17	0	-17	0	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCGCCACATCTT	NA	False	NA	NA	False	NA	NA	NA	67422238	67455542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.20	chr18	+	2772	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-10	2184	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTATCGAAGCCCAC	NA	False	NA	7	True	ATTAAA	-14	NA	67422311	67452163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.21	chr18	+	2605	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-10	1931	intron_retention	FALSE	canonical	2	4	junction_1	519.319334734007	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422311	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67428028_67428115_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.22	chr18	+	5543	2	NNC	ENSMUSG00000024525.8	novel	335	2	NA	NA	-6	-190	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTTCTCCTGGAAGTC	NA	False	NA	NA	False	NA	NA	NA	67422315	67427918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67424642_67424701
ES.16786.23	chr18	+	2712	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-5	1931	intron_retention	FALSE	canonical	3	39	junction_2	420.200745676	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422316	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.25	chr18	+	1781	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-2	2276	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	474.525223249513	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAAGTCTTTCAGGA	NA	False	NA	-3	True	AAAACA	-33	NA	67422319	67452255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439621_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.26	chr18	+	1830	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-2	2301	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	488.92431354454	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTTAAACAGTGGAAT	NA	False	NA	22	True	CATAAA	-17	NA	67422319	67452280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67433621_67433724_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.27	chr18	+	5031	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-2	-1148	intron_retention	FALSE	canonical	1	2	junction_4	429.733800030774	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGCGATTTGTTCTA	NA	False	NA	34	True	NA	NA	NA	67422319	67454394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443680_67443826_67448689_67450104_67451464
ES.16786.28	chr18	+	1346	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-1	1931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	402.233661405093	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422320	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439751_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.29	chr18	+	1608	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	67	3379	1	2184	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTATCGAAGCCCAC	NA	False	NA	7	True	ATTAAA	-14	NA	67422322	67452163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.3	chr18	+	1814	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	-14	3254	-14	2309	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGGAATTTTGGGGG	NA	False	NA	30	True	CATAAA	-25	NA	67422241	67452288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.30	chr18	+	1804	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	1	2182	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	389.0304536634	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTTTATCGAAGCCC	NA	False	NA	5	True	ATTAAA	-12	NA	67422322	67452161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.31	chr18	+	4966	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	2	-1173	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCATTTCTTTTATGA	NA	False	NA	9	True	NA	NA	NA	67422323	67454369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.32	chr18	+	2485	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	24	1931	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422345	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.33	chr18	+	1679	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	27	1931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	569.215930478236	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422348	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443810_67448689_67448967_67449951_67450104_67451464
ES.16786.34	chr18	+	4084	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	27	-1161	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	546.498613333099	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATGAGAAAACATTCAA	NA	False	NA	21	True	NA	NA	NA	67422348	67454381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67428028_67428115_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.35	chr18	+	3988	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	27	-1148	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	571.561484542341	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGCGATTTGTTCTA	NA	False	NA	34	True	NA	NA	NA	67422348	67454394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67428028_67428115_67435245_67435380_67439542_67439846_67442121_67442168_67448689_67448799_67449951_67450104_67451464
ES.16786.36	chr18	+	9092	5	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	28	1931	intron_retention	FALSE	canonical	3	39	junction_2	501.150925370791	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422349	67451910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67450104_67451464
ES.16786.37	chr18	+	7710	6	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	33	2301	intron_retention	FALSE	canonical	3	1009	junction_2	105.179085373471	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTTAAACAGTGGAAT	NA	False	NA	22	True	CATAAA	-17	NA	67422354	67452280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67450104_67451464
ES.16786.38	chr18	+	5133	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	33	-1173	intron_retention	FALSE	canonical	3	39	junction_2	420.200745676	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCATTTCTTTTATGA	NA	False	NA	9	True	NA	NA	NA	67422354	67454369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.4	chr18	+	6033	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	1	-980	1	980	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGGTGTTGAGAAGCCC	NA	False	NA	NA	False	NA	NA	NA	67422256	67456522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.41	chr18	+	4696	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	3759	-1173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	545.678934905866	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCATTTCTTTTATGA	NA	False	NA	9	True	NA	NA	NA	67426080	67454369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67427117_67428028_67428135_67435245_67435380_67439740_67439846_67442121_67442162_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.42	chr18	+	7912	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	6203	-1163	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	401.114315223916	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTATGAGAAAACATTC	NA	False	NA	19	True	NA	NA	NA	67428524	67454379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67432867_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.43	chr18	+	2832	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	8961	2184	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	582.25311291568	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTATCGAAGCCCAC	NA	False	NA	7	True	ATTAAA	-14	NA	67431282	67452163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67432218_67433546_67433724_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448967_67449951_67450104_67451464
ES.16786.44	chr18	+	2199	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-6785	2191	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	419.125180186859	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGAAGCCCACGTGTACT	NA	False	NA	14	True	ATTAAA	-21	NA	67434605	67452170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.45	chr18	+	2624	5	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	-2157	1928	intron_retention	FALSE	canonical	3	1087	junction_3	78.4932321923362	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGGGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	67439233	67451907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
ES.16786.46	chr18	+	4276	2	Genic_Genomic	ENSMUSG00000024525.8	novel	5054	8	NA	NA	518	-2245	multi-exon	FALSE	canonical	0	0	junction_1	0	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTAAGATTTAATGCATT	NA	False	NA	NA	False	AAGAAA	-33	NA	67442176	67446527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_67442923_67442997
ES.16786.47	chr18	+	5617	3	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	2115	1925	intron_retention	FALSE	canonical	3	959	junction_1	148	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGCTTTGGGTCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	67443773	67451904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67448799_67449951_67450104_67451464
ES.16786.48	chr18	+	5700	2	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	6823	0	intron_retention	FALSE	canonical	3	1255	junction_1	0	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCGCCACATCTT	NA	False	NA	NA	False	NA	NA	NA	67448481	67455542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67450104_67451464
ES.16786.6	chr18	+	1789	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	3	2309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	401.790939648561	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGGAATTTTGGGGG	NA	False	NA	30	True	CATAAA	-25	NA	67422258	67452288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67435253_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.7	chr18	+	563	2	NNC	ENSMUSG00000024525.8	novel	335	2	NA	NA	4	-4924	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGCGCCTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	67422259	67423184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67422938
ES.16786.8	chr18	+	2758	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	5	2291	5	-2291	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGGGCCCTCAGAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	67422260	67453251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16786.9	chr18	+	1501	9	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	5	1929	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	488.075413614536	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGGGTCTTCCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	67422260	67451908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67422577_67428028_67428115_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ES.16787.1	chr18	-	191	1	Intergenic	novelGene_13992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTCTGAAAACTCCC	7177	False	NA	NA	False	AAAACA	-5	NA	67432273	67432082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67432100_67432300
ES.16788.1	chr18	-	2151	2	Antisense	novelGene_ENSMUSG00000024525.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCGGCAGCAGATGTTT	1730	False	NA	NA	False	ATTAAA	-30	NA	67437720	67435308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_67437359_67437619
ES.16789.1	chr18	-	2255	1	Intergenic	novelGene_13993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGACTCCTGCCTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	67476121	67473866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67473900_67476100
ES.1679.1	chr1	-	221	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCAGGGAAGACTTCAA	NA	False	NA	NA	False	NA	NA	NA	156504695	156504474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156504500_156504700
ES.16790.1	chr18	+	925	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	188	2	188	-2	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTTGCAACTGGTTT	6396	False	NA	26	True	AATAAA	-24	NA	67476861	67500853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
ES.16790.3	chr18	+	214	1	Intergenic	novelGene_13994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTGGAGCGATGGCT	NA	False	NA	NA	False	NA	NA	NA	67490424	67490638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67490400_67490600
ES.16791.1	chr18	+	1871	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-90	-23	-90	23	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACTGTCATGTGGTCT	NA	False	NA	35	True	AATAAA	-37	NA	67523696	67535842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
ES.16791.2	chr18	+	1652	3	NIC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	324	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATCGGTCTCTTGAACT	NA	False	NA	10	True	AATAAA	-12	NA	67523779	67535817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67523885_67524394_67524504_67534379
ES.16791.3	chr18	+	4177	2	ISM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	-7	7353	-7	-6034	intron_retention	FALSE	canonical	3	648	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67523779	67528466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67523885_67524394
ES.16791.4	chr18	+	4687	1	Genic_Genomic	ENSMUSG00000001473.8	novel	NA	NA	NA	NA	-7	-6034	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67523779	67528466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_67523800_67528500
ES.16791.5	chr18	+	1763	5	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	1	13518	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	282.15952934466	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATGCAATTTAT	NA	False	NA	NA	False	NA	NA	NA	67523787	67549337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379_67535809_67549320
ES.16791.6	chr18	+	5008	2	ISM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	1	6514	1	-5195	intron_retention	FALSE	canonical	3	648	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	67523787	67529305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67523885_67524394
ES.16792.1	chr18	+	168	1	Intergenic	novelGene_13995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTGTTTACTTTCA	NA	False	NA	NA	False	NA	NA	NA	67560388	67560556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67560400_67560600
ES.16793.1	chr18	-	3402	1	Antisense	novelGene_ENSMUSG00000001473.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAATATAAAAATTTAAG	NA	False	NA	NA	False	NA	NA	NA	67537515	67534113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_67534100_67537500
ES.16794.1	chr18	-	3216	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	0	-122	0	122	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCAGCCTTCCAGATTGA	NA	False	NA	NA	False	NA	NA	NA	67582242	67537711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.10	chr18	-	2590	12	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_11	212.679132081971	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGTTGCCATGTTGT	NA	False	NA	-3	True	AATAAA	-30	NA	67582249	67537834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67581957
ES.16794.12	chr18	-	3333	3	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	37387	1	24163	-1	3prime_fragment	FALSE	canonical	3	752	junction_1	12	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGTTGCCATGTTGT	7876	False	NA	-3	True	AATAAA	-30	NA	67544855	67537834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67538585_67540335_67540531_67542467
ES.16794.13	chr18	-	3191	18	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	236.157460226776	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGTTGCCATGTTGT	NA	False	NA	-3	True	AATAAA	-30	NA	67582233	67537834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67565726_67565834_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.14	chr18	-	1436	4	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	360.286305904377	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGGGTTGCCATGTTG	NA	False	NA	-4	True	AATAAA	-29	NA	67582248	67537835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67581957
ES.16794.18	chr18	-	2918	15	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	190.986483120387	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582247	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67581957
ES.16794.2	chr18	-	3151	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-53	-4	-53	4	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGCCATGTTGTGCTTA	NA	False	NA	2	True	AATAAA	-35	NA	67582295	67537829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.21	chr18	-	2816	16	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	186.192731687715	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582241	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.24	chr18	-	5144	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_10	241.02434394683	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582251	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67565726_67565834_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.25	chr18	-	2685	15	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	192.058717637102	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582235	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.26	chr18	-	3054	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	180.605221668007	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582212	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573258_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.27	chr18	-	2652	13	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	205.941671893335	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582238	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67581957
ES.16794.28	chr18	-	4115	1	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	27067	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	7305	False	NA	-5	True	AATAAA	-28	NA	67541951	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67537800_67542000
ES.16794.29	chr18	-	4300	16	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	249.143189529413	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGGGTTGCCATGTT	NA	False	NA	-5	True	AATAAA	-28	NA	67582257	67537836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67580638
ES.16794.30	chr18	-	2981	16	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_15	183.541627128259	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATGAAGGGTTGCCAT	NA	False	NA	-8	True	AATAAA	-25	NA	67582235	67537839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67581957
ES.16794.31	chr18	-	2950	16	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	7	-12	combination_of_known_splicesites	FALSE	canonical	1	10	junction_10	183.41348550929	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGCATATGAAGGGT	NA	False	NA	-14	True	AATAAA	-19	NA	67582235	67537845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.32	chr18	-	3954	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	2519	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	180.145730937483	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAGCATATGAAGGGT	NA	False	NA	-14	True	AATAAA	-19	NA	67579658	67537845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67577068_67579648
ES.16794.34	chr18	-	3220	18	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	237.523016549983	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGCATATGAAGGG	NA	False	NA	-15	True	AATAAA	-18	NA	67582257	67537846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67580638_67580763_67581957
ES.16794.35	chr18	-	6043	16	NIC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-8	-13	intron_retention	FALSE	canonical	3	685	junction_13	37.1792056576433	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGCATATGAAGGG	NA	False	NA	-15	True	AATAAA	-18	NA	67582250	67537846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.36	chr18	-	3070	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_11	177.460371896798	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGCATATGAAGGG	NA	False	NA	-15	True	AATAAA	-18	NA	67582257	67537846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564823_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.38	chr18	-	2928	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	7	159	7	-159	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTCAAATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	67582235	67537992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.39	chr18	-	3665	15	NNC	ENSMUSG00000024527.11	novel	1034	6	NA	NA	-4	-3037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	186.206285104034	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGCTGTTTCTTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	67582246	67545189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67545437_67545680_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.4	chr18	-	5694	2	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	36964	0	23740	0	intron_retention	FALSE	canonical	3	752	junction_1	0	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	7453	False	NA	-2	True	AATAAA	-31	NA	67545278	67537833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67538585_67540335
ES.16794.40	chr18	-	3315	14	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	-8	7954	-8	-3635	5prime_fragment	FALSE	canonical	3	685	junction_11	24.243586353713	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTTTTTTTTTGGAA	NA	False	NA	NA	False	NA	NA	NA	67582250	67545787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.41	chr18	-	1854	13	NNC	ENSMUSG00000024527.11	novel	1034	6	NA	NA	3	-9293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	199.871764444661	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTGTGTCTTGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	67582239	67551445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67551583_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.42	chr18	-	4639	3	NIC	ENSMUSG00000024527.11	novel	3462	10	NA	NA	1476	8792	intron_retention	FALSE	canonical	3	708	junction_1	16.5	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATACCCAGGACCTTCA	NA	False	NA	NA	False	NA	NA	NA	67567542	67558128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67562325_67564723_67564849_67567224
ES.16794.5	chr18	-	3081	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	177.714647943691	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582289	67537833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540471_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ES.16794.6	chr18	-	4438	17	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	180.145730937483	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582267	67537833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67580638
ES.16794.8	chr18	-	3314	20	NNC	ENSMUSG00000024527.11	novel	3094	17	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	340.093884707609	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGTTGCCATGTTGT	NA	False	NA	-3	True	AATAAA	-30	NA	67582246	67537834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67557221_67557280_67558958_67559097_67562050_67562325_67564723_67564849_67565726_67565834_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67576249_67576302_67581957
ES.16795.1	chr18	+	5266	7	NIC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	-24	3842	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4.43471156521669	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTTTCCTCTCCTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	67597911	67616747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612141
ES.16795.10	chr18	+	2323	1	Antisense	novelGene_ENSMUSG00000024533.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATCACCCCATGAATTC	NA	False	NA	NA	False	NA	NA	NA	67633375	67635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_67633400_67635700
ES.16795.11	chr18	+	159	1	Intergenic	novelGene_13997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	67640488	67640647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67640500_67640600
ES.16795.12	chr18	+	170	1	Intergenic	novelGene_13998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAATAAA	1621	False	NA	NA	False	NA	NA	NA	67643257	67643427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67643300_67643400
ES.16795.2	chr18	+	2126	7	FSM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	22	-744	-3	744	multi-exon	FALSE	canonical	3	4	junction_6	3.34995854037363	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	67597957	67613649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137
ES.16795.3	chr18	+	2012	6	NIC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	-1	744	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	4.06939798987516	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	67597959	67613649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67612137
ES.16795.4	chr18	+	754	6	ISM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	36	1620	11	-195	5prime_fragment	FALSE	canonical	3	6	junction_5	2.87054001888146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTTGTCAACTGG	NA	False	NA	NA	False	NA	NA	NA	67597971	67611285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019
ES.16795.5	chr18	+	1188	7	NNC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	18	744	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	4.7169905660283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	67597978	67613649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67612137_67612207_67613011
ES.16795.6	chr18	+	1238	6	ISM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	7999	67	-7	-67	3prime_fragment	FALSE	canonical	3	4	junction_5	2.99332590941915	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGACTCTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	67605934	67612838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137
ES.16795.7	chr18	+	2865	5	NNC	ENSMUSG00000024530.9	novel	1404	7	NA	NA	108	744	intron_retention	FALSE	canonical	0	0	junction_2	4.81534007106456	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	67606049	67613649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67606096_67606810_67606949_67609864_67609936_67610033_67611132_67612137
ES.16795.8	chr18	+	158	1	Intergenic	novelGene_13996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCATTAGTAAG	NA	False	NA	NA	False	NA	NA	NA	67616246	67616404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67616200_67616400
ES.16795.9	chr18	+	151	2	Antisense	novelGene_ENSMUSG00000024533.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	67616251	67643427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_67616373_67643397
ES.16796.1	chr18	+	172	1	Intergenic	novelGene_13999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	67713209	67713381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67713200_67713400
ES.16797.1	chr18	+	2617	1	Intergenic	novelGene_14000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATGTGTAAAGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	67731901	67734518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67731900_67734500
ES.16798.1	chr18	+	179	1	Intergenic	novelGene_14002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACC	NA	False	NA	NA	False	NA	NA	NA	67738709	67738888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67738700_67738900
ES.16798.2	chr18	+	175	2	Antisense	novelGene_ENSMUSG00000073542.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67738712	67758418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_67738768_67758298
ES.16798.3	chr18	+	200	1	Intergenic	novelGene_14003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	67746652	67746852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67746700_67746900
ES.16798.4	chr18	+	178	1	Intergenic	novelGene_14004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67758241	67758419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67758200_67758400
ES.16799.1	chr18	+	1284	1	Antisense	novelGene_ENSMUSG00000073542.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67770278	67771562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_67770300_67771600
ES.168.1	chr1	+	5366	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-36	0	-36	0	multi-exon	FALSE	canonical	3	9	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTACATTATTTTG	9064	False	NA	NA	False	ATTAAA	-21	NA	20960793	21009874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_20960911_21002283_21002464_21004805
ES.168.2	chr1	+	4472	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-36	894	-36	-299	multi-exon	FALSE	canonical	3	9	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTCTCATGAATAAGAT	9064	False	NA	NA	False	ATTAAA	-15	NA	20960793	21008980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_20960911_21002283_21002464_21004805
ES.168.3	chr1	+	4774	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	-35	591	-35	4	multi-exon	FALSE	canonical	3	9	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTCAGGGTTACAAT	9065	False	NA	NA	False	AATAAA	-19	NA	20960794	21009283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_20960911_21002283_21002464_21004805
ES.168.4	chr1	+	4911	4	NNC	ENSMUSG00000025931.16	novel	5330	3	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24264068711928	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGATGTCAGGGTTAC	9065	False	NA	NA	False	AATAAA	-16	NA	20960794	21009280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_20960911_20977892_20978033_21002283_21002464_21004805
ES.168.6	chr1	+	3095	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	4	2231	4	-1636	multi-exon	FALSE	canonical	3	9	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTTTTGTGTTCTT	9104	False	NA	NA	False	AATATA	-14	NA	20960833	21007643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_20960911_21002283_21002464_21004805
ES.1680.1	chr1	+	217	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAAGTGTTAGCCGG	NA	False	NA	NA	False	ATTAAA	-7	NA	156540055	156540272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156540100_156540300
ES.16800.1	chr18	+	1677	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	-602	-16	-602	16	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATCTCTTTGAATCAG	NA	False	NA	42	True	AATAAA	-28	NA	67774066	67787248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ES.16800.2	chr18	+	3197	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-43	19	intron_retention	FALSE	canonical	3	414	junction_3	24.7434839907399	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCTTTGAATCAGTTA	NA	False	NA	45	True	AATAAA	-31	NA	67774625	67787251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67774806_67777378_67777551_67779062_67781317_67781842_67782017_67786222_67786344_67786955
ES.16800.3	chr18	+	1035	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-22	13	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	169.713169789501	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGTATCTCTTTGAAT	NA	False	NA	39	True	AATAAA	-45	NA	67774646	67787245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67774806_67777378_67777551_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ES.16800.4	chr18	+	3690	5	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-13	16	intron_retention	FALSE	canonical	3	417	junction_3	24.6107192093202	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATCTCTTTGAATCAG	NA	False	NA	42	True	AATAAA	-28	NA	67774655	67787248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67774806_67777378_67777551_67779062_67782017_67786222_67786344_67786955
ES.16800.5	chr18	+	1076	7	NNC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	164.271540106279	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGGTTTTATCTGGAAA	NA	False	NA	25	True	AATAAA	-31	NA	67774660	67787231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67774806_67777378_67777551_67779062_67779122_67781187_67781317_67781842_67782017_67786222_67786344_67786955
ES.16800.6	chr18	+	761	5	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	192.285432365533	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	False	NA	26	True	AATAAA	-32	NA	67774671	67787232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67786955
ES.16800.7	chr18	+	2576	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	1	8	intron_retention	FALSE	canonical	3	396	junction_2	29.6283647878178	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGGAAAGTATCTCTT	NA	False	NA	34	True	AATAAA	-40	NA	67774671	67787240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67774806_67777378_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ES.16801.1	chr18	-	6331	17	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-100	2848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.6075898208551	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATCTGGCCCTTTATC	NA	False	NA	NA	False	NA	NA	NA	67743960	67618430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67618930_67620915_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743471
ES.16801.10	chr18	-	5613	14	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-45	258	intron_retention	FALSE	canonical	1	3	junction_13	23.7374694443469	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACCATGAAGAAATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	67743905	67621585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
ES.16801.12	chr18	-	3452	6	ISM	ENSMUSG00000024533.18	ENSMUST00000224122.2	3551	8	4613	-248	-3392	248	3prime_fragment	FALSE	canonical	0	0	junction_5	37.1752605908822	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCACATTGAAGGACCATG	7177	False	NA	NA	False	AATAAA	-10	NA	67634191	67621595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67634137
ES.16801.13	chr18	-	4950	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-135	14	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGATTTCAAGTCTCA	NA	False	NA	NA	False	ATTAAA	-35	NA	67743995	67621829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.14	chr18	-	4886	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-121	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGACCTTAATTACT	NA	False	NA	NA	False	ATTAAA	-20	NA	67743981	67621844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
ES.16801.15	chr18	-	5456	14	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-112	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	24.2587140446602	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAATGACCTTAATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	67743972	67621846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624620_67628209_67628377_67629631_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.16	chr18	-	5076	17	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-107	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	29.046769936604	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGACTTAATGACCTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	67743967	67621849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67634137_67634312_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.17	chr18	-	3965	17	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-107	-1086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.3868991856916	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTAGTAGTTCATCT	NA	False	NA	NA	False	AATAAA	-23	NA	67743967	67622929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624620_67627466_67627610_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.18	chr18	-	3762	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-75	-1086	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	23.5394805137484	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTAGTAGTTCATCT	NA	False	NA	NA	False	AATAAA	-23	NA	67743935	67622929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.19	chr18	-	3848	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-135	-1088	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTAGTAGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	67743995	67622931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.2	chr18	-	5502	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTTGAATTCCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	67743996	67621278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.20	chr18	-	2780	4	ISM	ENSMUSG00000024533.18	ENSMUST00000224122.2	3551	8	8246	1088	60	-1088	intron_retention	FALSE	canonical	3	86	junction_2	4.64279609239471	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTAGTAGTTCAT	8346	False	NA	NA	False	AATAAA	-21	NA	67630558	67622931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631
ES.16801.21	chr18	-	3505	17	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-135	-1088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	22.8013671465112	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTTAGTAGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	67743995	67622931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474_67743517_67743859
ES.16801.22	chr18	-	3766	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-89	-1089	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATGTTAGTAGTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	67743949	67622932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
ES.16801.23	chr18	-	3962	17	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-80	-1093	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	29.046769936604	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTAATGCATGTTAGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	67743940	67622936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67634137_67634312_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.24	chr18	-	3327	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-80	662	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGCCATGCATAATTT	NA	False	NA	NA	False	AAGAAA	-35	NA	67743940	67623397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.25	chr18	-	3360	1	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-10465	-16266	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	67649269	67645909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67645900_67649300
ES.16801.26	chr18	-	3630	10	NNC	ENSMUSG00000024533.18	novel	5033	15	NA	NA	-130	-16859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7211421989835	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAGTGGTTTGAAATG	NA	False	NA	NA	False	AATAAA	-18	NA	67743990	67646502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67648673_67651074_67651164_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.27	chr18	-	3989	8	ISM	ENSMUSG00000024533.18	ENSMUST00000115050.10	5405	17	-115	28449	-115	-20084	5prime_fragment	FALSE	canonical	3	61	junction_7	12.3106060130346	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTTCATGGGAACACAC	NA	False	NA	NA	False	NA	NA	NA	67743975	67649727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.28	chr18	-	180	1	Intergenic	novelGene_14001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGCGGAGTCACA	NA	False	NA	NA	False	NA	NA	NA	67732571	67732391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67732400_67732600
ES.16801.29	chr18	-	2321	1	Genic_Genomic	ENSMUSG00000024533.18	novel	NA	NA	NA	NA	-69	-111965	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAGTTATATTAGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	67743929	67741608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_67741600_67743900
ES.16801.3	chr18	-	5457	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGTTGAATTCCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	67743986	67621278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
ES.16801.4	chr18	-	5478	16	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-101	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	23.5338054721288	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGTGTTGAATTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	67743961	67621280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636657_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.5	chr18	-	5414	17	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-120	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8013671465112	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGTGTTGAATTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	67743980	67621280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624532_67624601_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.7	chr18	-	5203	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-128	274	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCCACTGACTGGGCT	NA	False	NA	NA	False	AATAAA	-36	NA	67743988	67621569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.8	chr18	-	5251	17	NNC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-113	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.3868991856916	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACCATGAAGAAATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	67743973	67621585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67624620_67625851_67625931_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ES.16801.9	chr18	-	5136	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-112	258	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACCATGAAGAAATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	67743972	67621585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
ES.16802.1	chr18	-	4419	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-5	-838	-5	838	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTCTTGTATTAGTACT	825	False	NA	NA	False	AATAAA	-17	NA	67774411	67750031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.10	chr18	-	3462	11	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-154	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	24.0310216179005	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	676	False	NA	-5	True	AATAAA	-17	NA	67774560	67750870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756441_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.11	chr18	-	3547	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	20.7101204947989	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	820	False	NA	-5	True	AATAAA	-17	NA	67774416	67750870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
ES.16802.13	chr18	-	3576	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.5133160795718	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	802	False	NA	-5	True	AATAAA	-17	NA	67774434	67750870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773104_67773234_67774181
ES.16802.14	chr18	-	3586	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	297	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.7921439912943	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTAGTTTTGGATGTCT	1127	False	NA	-7	True	AATAAA	-15	NA	67774109	67750872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67773871
ES.16802.15	chr18	-	2783	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-7	800	-7	-799	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCATAAGTGTTAATA	823	False	NA	NA	False	NA	NA	NA	67774413	67751669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.16	chr18	-	2426	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-37	1187	-37	-1186	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAGATCTGTTACTTT	793	False	NA	NA	False	AATAAA	-38	NA	67774443	67752056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.17	chr18	-	2161	11	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-39	-1186	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	24.0310216179005	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAGATCTGTTACTTT	791	False	NA	NA	False	AATAAA	-38	NA	67774445	67752056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756441_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.18	chr18	-	2245	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	88	-1204	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	20.7101204947989	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCGGTGTTTAAATGTGAA	918	False	NA	NA	False	AATAAA	-20	NA	67774318	67752074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
ES.16802.19	chr18	-	2381	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-28	-1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.7921439912943	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGGTGTTTAAATGTGA	802	False	NA	NA	False	AATAAA	-19	NA	67774434	67752075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773217_67774181
ES.16802.2	chr18	-	5785	11	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	13	837	intron_retention	FALSE	canonical	3	12	junction_8	21.6575621896833	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTCTTGTATTAGTAC	843	False	NA	NA	False	AATAAA	-16	NA	67774393	67750032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
ES.16802.20	chr18	-	1158	1	NIC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	1190	604	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACAAAACAAAAAAA	4443	False	NA	NA	False	NA	NA	NA	67770793	67769635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67769600_67770800
ES.16802.3	chr18	-	4318	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-5	837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.7337156003511	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTCTTGTATTAGTAC	825	False	NA	NA	False	AATAAA	-16	NA	67774411	67750032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756441_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.4	chr18	-	5427	2	ISM	ENSMUSG00000073542.4	ENSMUST00000236857.2	3354	11	16360	-837	16360	836	3prime_fragment	FALSE	canonical	3	100	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGTCTTGTATTAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	67755623	67750033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67752443_67752605
ES.16802.5	chr18	-	4351	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	22	835	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	20.7101204947989	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGAGTCTTGTATTAGT	852	False	NA	NA	False	AATAAA	-14	NA	67774384	67750034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
ES.16802.6	chr18	-	3776	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	-197	-3	-197	3	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGATGTCTTGACTT	633	False	NA	-1	True	AATAAA	-21	NA	67774603	67750866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16802.7	chr18	-	3193	10	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.8332863319837	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGATGTCTTGACTT	835	False	NA	-1	True	AATAAA	-21	NA	67774401	67750866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756441_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67773077_67773234_67774181
ES.16802.8	chr18	-	3341	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	88	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.136044530943	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGATGTCTTGACTT	918	False	NA	-1	True	AATAAA	-21	NA	67774318	67750866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759701_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
ES.16802.9	chr18	-	6635	10	NIC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	-177	0	intron_retention	FALSE	canonical	3	67	junction_4	9.43986817233753	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTTGGATGTCTTGA	653	False	NA	-4	True	AATAAA	-18	NA	67774583	67750869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67752443_67752605_67752824_67756206_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ES.16803.1	chr18	+	157	1	Intergenic	novelGene_14006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	67869332	67869489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_67869300_67869500
ES.16804.1	chr18	+	3661	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	-118	-1	-118	1	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGTCTTATAAAAAAGC	NA	False	NA	20	True	AATAAA	-22	NA	67907827	67928558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.10	chr18	+	3528	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	614.400317382731	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67907951	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917962_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.100	chr18	+	8013	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	520	-2	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_42	31.9048414031269	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCCTTTTTGTAT	213	False	NA	6	True	AATAAA	-15	NA	67933723	68018237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.102	chr18	+	2683	7	ISM	ENSMUSG00000024542.10	ENSMUST00000225077.2	2607	16	5982	10704	5982	-10704	internal_fragment	FALSE	canonical	3	108	junction_2	9.19087711930816	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTACAATACTGTGCAC	3193	False	NA	NA	False	NA	NA	NA	67939185	67952660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840
ES.16804.104	chr18	+	4066	5	NIC	ENSMUSG00000024542.10	novel	2607	16	NA	NA	9123	-10704	intron_retention	FALSE	canonical	3	108	junction_1	8.61321658847611	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTACAATACTGTGCAC	6334	False	NA	NA	False	NA	NA	NA	67942326	67952660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67943200_67945396_67945518_67946942_67949067_67949803_67949932_67951840
ES.16804.105	chr18	+	7796	39	NIC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	12203	0	intron_retention	FALSE	canonical	3	116	junction_5	27.8785951310677	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	9414	False	NA	10	True	AATAAA	-19	NA	67945406	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.106	chr18	+	7220	39	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	13733	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	38.7987295248489	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	67946936	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984744_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.11	chr18	+	3462	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_8	591.206393740798	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67907956	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926286
ES.16804.111	chr18	+	6806	4	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-6675	-7957	intron_retention	TRUE	canonical	0	0	junction_3	63.3368420080727	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTCTCTACGCATGT	NA	False	NA	NA	False	NA	NA	NA	67967405	67976915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67968390_67968479_67968595_67970987_67973589_67973809
ES.16804.112	chr18	+	5787	30	ISM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	34388	4	-6516	-2	3prime_fragment	FALSE	canonical	3	122	junction_1	26.1785236610118	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCCTTTTTGTAT	NA	False	NA	6	True	AATAAA	-15	NA	67967564	68018237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.113	chr18	+	5063	30	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-5525	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.1801754284429	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	NA	False	NA	10	True	AATAAA	-19	NA	67968555	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67968595_67970987_67971157_67974054_67974932_67975658_67975832_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.116	chr18	+	4292	28	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	497	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	50.2020608499317	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAACTTGTCCTTTTT	2232	False	NA	2	True	AATAAA	-11	NA	67974577	68018233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67989962_67990104_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.119	chr18	+	4866	22	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-2059	0	intron_retention	FALSE	canonical	3	89	junction_19	30.0136023584409	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	67982357	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67983309_67983480_67983625_67983745_67983807_67984735_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.12	chr18	+	6889	7	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	18	136	18	-136	intron_retention	FALSE	canonical	3	1621	junction_6	155.307669553767	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATAAGGATATTTTTG	NA	False	NA	10	True	AATAAA	-23	NA	67907963	67928421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409
ES.16804.120	chr18	+	3984	24	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-1792	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_21	28.9779917793045	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	67982624	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.121	chr18	+	2841	4	NIC	ENSMUSG00000024542.10	novel	3113	17	NA	NA	194	19	intron_retention	FALSE	canonical	3	165	junction_1	11.5758369027902	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGATAGACATTCAGAG	NA	False	NA	NA	False	NA	NA	NA	67987407	67994080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67989396_67991060_67991322_67991925_67992042_67993604
ES.16804.122	chr18	+	3359	2	NIC	ENSMUSG00000024542.10	novel	3113	17	NA	NA	-1624	0	intron_retention	FALSE	canonical	3	192	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	67989139	67994061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67992042_67993604
ES.16804.123	chr18	+	2300	15	ISM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	57879	2	292	0	3prime_fragment	FALSE	canonical	3	134	junction_4	23.7778837389293	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	67991055	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.124	chr18	+	8636	4	NNC	ENSMUSG00000024542.10	novel	524	2	NA	NA	2250	0	intron_retention	TRUE	non_canonical	0	0	junction_1	93.8982901276104	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	NA	False	NA	8	True	AATAAA	-17	NA	68005647	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68008723_68008876_68013949_68014354_68014414_68017809
ES.16804.125	chr18	+	148	1	Intergenic	novelGene_14009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTTAGACGCTGAGTC	1222	False	NA	NA	False	NA	NA	NA	68008725	68008873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_68008700_68008900
ES.16804.126	chr18	+	1348	1	Intergenic	novelGene_14010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	6947	False	NA	NA	False	NA	NA	NA	68014450	68015798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_68014400_68015800
ES.16804.13	chr18	+	3307	10	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	19	-125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	588.024564868585	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGTCTTTTTTTTC	NA	False	NA	21	True	AATAAA	-34	NA	67907964	67928432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219_67927544_67927634
ES.16804.16	chr18	+	4655	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	-77	-2894	22	0	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	False	NA	19	True	AATAAA	-21	NA	67907967	67928557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.17	chr18	+	4646	6	ISM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	-77	-12	22	12	intron_retention	FALSE	canonical	3	1716	junction_5	134.054615735528	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTGAAATGATT	NA	False	NA	NA	False	AATAAA	-23	NA	67907967	67925675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761
ES.16804.19	chr18	+	1769	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	-72	-13	27	13	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGTGTGAAATGATTG	NA	False	NA	NA	False	AATAAA	-24	NA	67907972	67925676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.2	chr18	+	3507	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	-89	124	-89	-124	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTCTTTTTTTTCT	NA	False	NA	22	True	AATAAA	-35	NA	67907856	67928433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.20	chr18	+	1650	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	27	1012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	611.34462457766	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGTAATGTGTTTA	NA	False	NA	13	True	AATAAA	-19	NA	67907972	67926675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916967_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.22	chr18	+	3450	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	593.295810171745	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67907984	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.23	chr18	+	3378	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	621.395594106524	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67907999	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921874_67922488_67922568_67924933_67925085_67926219
ES.16804.24	chr18	+	3221	10	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	-39	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	588.024564868585	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTGTTGTCTTATAAA	NA	False	NA	15	True	AATAAA	-17	NA	67908005	67928553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219_67926290_67926546
ES.16804.25	chr18	+	3070	8	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	-33	-133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	657.954343679975	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGATATTTTTGTCT	NA	False	NA	13	True	AATAAA	-26	NA	67908011	67928424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921799_67924944_67925085_67926219
ES.16804.26	chr18	+	4459	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	-5	-2770	-5	-124	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTCTTTTTTTTCT	NA	False	NA	22	True	AATAAA	-35	NA	67908039	67928433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.27	chr18	+	5803	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	0	-6	intron_retention	FALSE	canonical	3	1509	junction_7	183.506881370166	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATCTGTTGTCTTATA	NA	False	NA	13	True	AATAAA	-15	NA	67908044	67928551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67925085_67926219
ES.16804.3	chr18	+	1738	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	-77	1881	-77	1013	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTAATGTGTTTAC	NA	False	NA	14	True	AATAAA	-20	NA	67907868	67926676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.30	chr18	+	4047	7	ISM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	6	-3	6	3	intron_retention	FALSE	canonical	3	1621	junction_6	155.307669553767	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGAGACCAGTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	67908050	67925666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409
ES.16804.31	chr18	+	3259	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	6	-127	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	593.295810171745	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATATTTTTGTCTTTTTTT	NA	False	NA	19	True	AATAAA	-32	NA	67908050	67928430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.32	chr18	+	2680	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	7	-1003	7	1003	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGTTTTGAGTGGTA	NA	False	NA	4	True	AATAAA	-10	NA	67908051	67926666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.33	chr18	+	4685	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	593.48667845201	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67908056	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67911018_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.34	chr18	+	3331	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_4	646.151653393902	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	False	NA	19	True	AATAAA	-21	NA	67908057	67928557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.4	chr18	+	9233	53	Fusion	ENSMUSG00000079614.5_ENSMUSG00000024542.10	novel	4548	26	NA	NA	-13	0	multi-exon	FALSE	canonical	2	8	junction_8	580.927854993286	1439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	NA	False	NA	10	True	AATAAA	-19	NA	67907932	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.40	chr18	+	2471	11	Fusion	ENSMUSG00000079614.5_ENSMUSG00000024542.10	novel	3542	9	NA	NA	18	33	multi-exon	FALSE	canonical	2	8	junction_8	815.031385898727	1300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTTTCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	67908062	67938480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67933724_67933896_67936058_67936227_67937435
ES.16804.43	chr18	+	6919	7	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	122	2	23	-2	intron_retention	FALSE	canonical	3	1621	junction_6	155.307669553767	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67908067	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409
ES.16804.44	chr18	+	2564	7	NIC	ENSMUSG00000079614.5	novel	1684	8	NA	NA	23	1002	intron_retention	FALSE	canonical	3	39	junction_4	697.596767481043	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATTGTTTTGAGTGGT	NA	False	NA	3	True	AATAAA	-9	NA	67908067	67926665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67921761_67921903_67922409_67922568_67924933
ES.16804.45	chr18	+	3191	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	23	-130	combination_of_known_splicesites	FALSE	canonical	3	39	junction_4	646.151653393902	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATATTTTTGTCTTTT	NA	False	NA	16	True	AATAAA	-29	NA	67908067	67928427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.47	chr18	+	3220	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	23	-133	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_8	591.206393740798	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGATATTTTTGTCT	NA	False	NA	13	True	AATAAA	-26	NA	67908067	67928424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926286
ES.16804.48	chr18	+	3186	8	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	25	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	657.954343679975	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGAATCTGTTGTC	NA	False	NA	8	True	AATAAA	-10	NA	67908069	67928546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921840_67924933_67925085_67926219
ES.16804.49	chr18	+	2204	10	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	25	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	588.024564868585	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGAATCTGTTGT	NA	False	NA	7	True	AATAAA	-9	NA	67908069	67928545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219_67926524_67927725
ES.16804.50	chr18	+	3521	10	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	727.566415448713	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTGTCTTATAAAA	NA	False	NA	16	True	AATAAA	-18	NA	67908070	67928554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67911018_67911126_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.54	chr18	+	4402	8	NNC	ENSMUSG00000079614.5	novel	1684	8	NA	NA	29	-139	intron_retention	FALSE	non_canonical	0	0	junction_4	661.309276499032	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAATCATAAGGATATTT	NA	False	NA	7	True	AATAAA	-20	NA	67908073	67928418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920233_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.55	chr18	+	3655	10	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	755.971944087156	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTGTCTTATAAAA	NA	False	NA	16	True	AATAAA	-18	NA	67908073	67928554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67914831_67915076_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.56	chr18	+	3261	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	29	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	637.667497003488	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATCTGTTGTCTTATA	NA	False	NA	13	True	AATAAA	-15	NA	67908073	67928551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67912274_67912326_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.58	chr18	+	1304	8	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	37	1013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	657.954343679975	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTAATGTGTTTAC	NA	False	NA	14	True	AATAAA	-20	NA	67908081	67926676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921840_67924933_67925085_67926219
ES.16804.6	chr18	+	7788	1	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	0	-9930	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1098	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAAAGGATCTTG	NA	False	NA	NA	False	NA	NA	NA	67907945	67915733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67907900_67915700
ES.16804.60	chr18	+	1459	8	NIC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	42	1003	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	593.295810171745	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGTTTTGAGTGGTA	NA	False	NA	4	True	AATAAA	-10	NA	67908086	67926666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_67908191_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.61	chr18	+	3329	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	919	-133	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_1	584.7677824359	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGATATTTTTGTCT	NA	False	NA	13	True	AATAAA	-26	NA	67908963	67928424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67909129_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.62	chr18	+	3333	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	3605	-4	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_1	585.413408947045	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTGTTGTCTTATAAA	NA	False	NA	15	True	AATAAA	-17	NA	67911649	67928553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67911690_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.63	chr18	+	4377	6	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	9037	6	8938	-6	intron_retention	FALSE	canonical	3	1621	junction_4	87.8667172483415	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATCTGTTGTCTTATA	NA	False	NA	13	True	AATAAA	-15	NA	67916982	67928551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ES.16804.64	chr18	+	8148	46	FSM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	-55	0	-55	0	multi-exon	FALSE	canonical	3	91	junction_4	30.2980747463157	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	52	False	NA	10	True	AATAAA	-19	NA	67933121	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.66	chr18	+	7998	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	36.8846201906915	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCCTTTTTGTATT	73	False	NA	7	True	AATAAA	-16	NA	67933142	68018238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.68	chr18	+	10685	44	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_7	37.1997371426595	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	83	False	NA	10	True	AATAAA	-19	NA	67933152	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67940477_67943146_67943200_67945396_67945518_67946942_67947091_67949876_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.7	chr18	+	7549	6	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	1	0	1	0	intron_retention	FALSE	canonical	3	1716	junction_5	134.054615735528	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	False	NA	19	True	AATAAA	-21	NA	67907946	67928557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761
ES.16804.71	chr18	+	8173	47	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	45.7291741932954	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	106	False	NA	10	True	AATAAA	-19	NA	67933175	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67938289_67938354_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998864_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.72	chr18	+	8107	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_36	36.8931322860576	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	106	False	NA	8	True	AATAAA	-17	NA	67933175	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998864_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.73	chr18	+	1464	4	FSM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	-6	-33	0	33	multi-exon	FALSE	canonical	3	112	junction_2	11.1455023315337	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTTTCTATTTGT	107	False	NA	NA	False	NA	NA	NA	67933176	67938480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435
ES.16804.74	chr18	+	8157	47	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	42.1886124091944	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCCTTTTTGTATT	107	False	NA	7	True	AATAAA	-16	NA	67933176	68018238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67938289_67938354_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.75	chr18	+	8077	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	42.8684810398813	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	110	False	NA	8	True	AATAAA	-17	NA	67933179	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984744_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011611_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.77	chr18	+	2666	3	ISM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	-3	-29	3	29	intron_retention	FALSE	canonical	3	112	junction_2	13.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTATTTGTTTTTCTAT	110	False	NA	NA	False	NA	NA	NA	67933179	67938476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67933257_67933724_67933896_67936058
ES.16804.78	chr18	+	8081	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.6163610319227	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCCTTTTTGTAT	111	False	NA	6	True	AATAAA	-15	NA	67933180	68018237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937558_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.79	chr18	+	7309	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	37.5021316266584	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	111	False	NA	10	True	AATAAA	-19	NA	67933180	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974152_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.8	chr18	+	1971	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_8	616.996758500399	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGTTGTCTTATAAAAA	NA	False	NA	17	True	AATAAA	-19	NA	67907947	67928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67927786
ES.16804.81	chr18	+	8128	47	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.185198215138	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	114	False	NA	10	True	AATAAA	-19	NA	67933183	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936055_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67988840_67988877_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.83	chr18	+	4683	9	ISM	ENSMUSG00000024542.10	ENSMUST00000225077.2	2607	16	-7	10736	-7	-10736	intron_retention	FALSE	canonical	3	91	junction_4	14.2280532751322	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	127	False	NA	NA	False	NA	NA	NA	67933196	67952628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924
ES.16804.85	chr18	+	11245	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56.256803996208	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	128	False	NA	8	True	AATAAA	-17	NA	67933197	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936049_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67958126_67958337_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983186_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995528_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.86	chr18	+	7349	47	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	50.5841117639616	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	128	False	NA	10	True	AATAAA	-19	NA	67933197	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67938289_67938354_67940327_67940470_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974152_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.88	chr18	+	8832	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_28	38.8786520699581	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	131	False	NA	10	True	AATAAA	-19	NA	67933200	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988332_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.89	chr18	+	7745	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_20	37.459592554914	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	136	False	NA	8	True	AATAAA	-17	NA	67933205	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974152_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.9	chr18	+	3545	9	NNC	ENSMUSG00000079614.5	novel	3542	9	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	619.061777510936	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTGTCTTATAAAA	NA	False	NA	16	True	AATAAA	-18	NA	67907947	67928554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920217_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ES.16804.90	chr18	+	8119	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	38.3558774288027	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	136	False	NA	10	True	AATAAA	-19	NA	67933205	68018241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961598_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.93	chr18	+	8104	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_33	37.828501894148	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	138	False	NA	8	True	AATAAA	-17	NA	67933207	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993563_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.94	chr18	+	2041	12	NNC	ENSMUSG00000024542.10	novel	2607	16	NA	NA	7	-5734	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.4578325428022	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACTTTATCTTTTTCT	141	False	NA	NA	False	AAAAAG	-4	NA	67933210	67957630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952628_67957611
ES.16804.95	chr18	+	7965	45	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_29	38.7535322303733	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTTGTCCTTTTTGTA	142	False	NA	5	True	AATAAA	-14	NA	67933211	68018236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.97	chr18	+	8118	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	38.2628079097157	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCCTTTTTGTATTT	150	False	NA	8	True	AATAAA	-17	NA	67933219	68018239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945585_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
ES.16804.98	chr18	+	7924	44	NNC	ENSMUSG00000024542.10	novel	4548	26	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.3818796509236	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCCTTTTTGTAT	198	False	NA	6	True	AATAAA	-15	NA	67933267	68018237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933341_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ES.16804.99	chr18	+	7808	43	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	520	-2048	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	37.1093255235975	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGCTGGATCACATG	213	False	NA	NA	False	NA	NA	NA	67933723	68012330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68011918
ES.16805.1	chr18	-	1621	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	-38	-15	-31	14	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGTGTGTGTTAT	NA	False	NA	0	True	ATTAAA	-33	NA	67857696	67798566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16805.10	chr18	-	1707	11	NNC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	191.135580151891	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATAGACTATGTTGG	NA	False	NA	-26	True	ATTAAA	-7	NA	67857658	67798592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67853683_67853834_67857511
ES.16805.11	chr18	-	2650	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	19	-2	-3	2	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCCTTACCTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	67857646	67804279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16805.12	chr18	-	1917	9	ISM	ENSMUSG00000024539.18	ENSMUST00000120934.8	1497	10	12	6360	12	-659	5prime_fragment	FALSE	canonical	0	0	junction_6	175.966438561448	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAACAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	67857631	67804940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67805839_67808789_67808900_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16805.13	chr18	-	1465	8	NIC	ENSMUSG00000024539.18	novel	2667	9	NA	NA	-31	-1132	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	141.948395337093	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGGATACTGTTACT	NA	False	NA	NA	False	AATAAA	-10	NA	67857696	67805413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67844906_67844998_67857511
ES.16805.14	chr18	-	2723	3	ISM	ENSMUSG00000024539.18	ENSMUST00000128169.2	760	7	9335	-2451	9335	-2155	3prime_fragment	FALSE	canonical	3	424	junction_1	9	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGACTGAAGCACTCAC	NA	False	NA	NA	False	NA	NA	NA	67813959	67806436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_67808957_67810779_67810933_67813909
ES.16805.15	chr18	-	4399	4	Antisense	novelGene_ENSMUSG00000024542.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACGGAGCGAGCAGAGG	NA	False	NA	NA	False	AATAAA	-12	NA	68003260	67812101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_67812123_67831257_67831412_67998253_68001616_68002398
ES.16805.16	chr18	-	154	1	Intergenic	novelGene_14005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67827642	67827488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67827500_67827600
ES.16805.17	chr18	-	249	1	Intergenic	novelGene_14007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGGA	NA	False	NA	NA	False	AAGAAA	-28	NA	67903837	67903588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67903600_67903800
ES.16805.18	chr18	-	1323	1	Genic_Genomic	ENSMUSG00000097835.2	novel	NA	NA	NA	NA	-446	-269	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGACTCACCACCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	67908373	67907050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_67907000_67908400
ES.16805.19	chr18	-	1303	1	Genic_Genomic	ENSMUSG00000118134.2	novel	NA	NA	NA	NA	22929	321	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCGTAGCACATTCAAC	NA	False	NA	NA	False	NA	NA	NA	67910084	67908781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_67908800_67910100
ES.16805.2	chr18	-	8350	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	19	-5702	-3	1	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGTTTGTGTGTGTGT	NA	False	NA	-13	True	ATTAAA	-20	NA	67857646	67798579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16805.20	chr18	-	177	1	Intergenic	novelGene_14008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67958340	67958163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_67958200_67958300
ES.16805.21	chr18	-	1586	2	Antisense	novelGene_ENSMUSG00000024542.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGCTCACAGTAATTT	NA	False	NA	NA	False	NA	NA	NA	67974821	67973011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_67973581_67973804
ES.16805.22	chr18	-	3208	2	Antisense	novelGene_ENSMUSG00000024542.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGCTCACAGTAATTT	NA	False	NA	NA	False	NA	NA	NA	67976439	67973011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_67973581_67973800
ES.16805.4	chr18	-	1479	10	NNC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	173.952171658451	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	67857786	67798581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857728
ES.16805.5	chr18	-	1378	8	NIC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	141.632320766534	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	67857660	67798581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67857511
ES.16805.6	chr18	-	1537	10	NNC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.963242889247	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGACTATGTTGGTTTG	NA	False	NA	-22	True	ATTAAA	-11	NA	67857672	67798588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_67798939_67805768_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16805.9	chr18	-	1941	9	NIC	ENSMUSG00000024539.18	novel	1568	10	NA	NA	-5	-10	intron_retention	FALSE	canonical	0	0	junction_6	140.432757485567	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATAGACTATGTTGGT	NA	False	NA	-25	True	ATTAAA	-8	NA	67857648	67798591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ES.16806.1	chr18	-	205	1	Intergenic	novelGene_14011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATTAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	68038191	68037986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_68038000_68038200
ES.16807.1	chr18	+	7571	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-1494	4999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.81495457622364	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCCCTGGGGTTGTTT	5130	False	NA	NA	False	ATTAAA	-20	NA	68064833	68393621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68064954_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.10	chr18	+	1807	6	FSM	ENSMUSG00000024544.10	ENSMUST00000063775.5	2495	6	-203	891	-203	-891	multi-exon	FALSE	canonical	0	0	junction_1	10.7070070514593	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACGGTCTTCGTTTCTG	6421	False	NA	NA	False	AGTAAA	-12	NA	68066124	68387731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68066460_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.11	chr18	+	1900	8	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	161	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.8024940430912	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACGGTCTTCGTTTCTG	6785	False	NA	NA	False	AGTAAA	-12	NA	68066488	68387731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066619_68138755_68138845_68197287_68197758_68239621_68239763_68245260_68245470_68368725_68368881_68383641_68383696_68387079
ES.16807.12	chr18	+	1648	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	204	-891	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.80814017448254	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACGGTCTTCGTTTCTG	6828	False	NA	NA	False	AGTAAA	-12	NA	68066531	68387731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066619_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.13	chr18	+	1747	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	773	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.81495457622364	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACGGTCTTCGTTTCTG	7397	False	NA	NA	False	AGTAAA	-12	NA	68067100	68387731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68067287_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.14	chr18	+	7451	6	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	72425	4996	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	4.42718872423573	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTGTTCCCTGGGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	68138752	68393618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.2	chr18	+	1640	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-1453	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.81495457622364	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACGGTCTTCGTTTCTG	5171	False	NA	NA	False	AGTAAA	-12	NA	68064874	68387731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68064954_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.3	chr18	+	7833	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-254	4999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.66091783079296	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCCCTGGGGTTGTTT	6370	False	NA	NA	False	ATTAAA	-20	NA	68066073	68393621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066460_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383645_68383696_68387079
ES.16807.4	chr18	+	2735	6	FSM	ENSMUSG00000024544.10	ENSMUST00000063775.5	2495	6	-242	2	-242	-2	multi-exon	FALSE	canonical	0	0	junction_1	10.7070070514593	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGCTATTTTGTGTAC	6382	False	NA	NA	False	AATAAA	-14	NA	68066085	68388620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68066460_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.5	chr18	+	1922	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-225	-887	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	4.61880215351701	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTTCGTTTCTGCTTC	6399	False	NA	NA	False	AGTAAA	-16	NA	68066102	68387735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066460_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.7	chr18	+	1069	4	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-217	-233708	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.97614984548545	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGGGTAGTACGTGTA	6407	False	NA	NA	False	NA	NA	NA	68066110	68154914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066460_68138755_68138845_68152204_68152302_68154380
ES.16807.8	chr18	+	2014	8	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-216	-883	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	9.75202752335772	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTTTCTGCTTCCTTT	6408	False	NA	NA	False	AGTAAA	-20	NA	68066111	68387739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066460_68138755_68138845_68152204_68152302_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16807.9	chr18	+	2234	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-216	-566	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	4.61880215351701	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGGGAAGAATCAGCC	6408	False	NA	NA	False	AATAAA	-23	NA	68066111	68388056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68066460_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
ES.16808.1	chr18	+	5158	1	NIC	ENSMUSG00000024544.10	novel	3031	6	NA	NA	35345	-61	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCAAACCTATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	68396482	68401640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68396500_68401600
ES.16809.1	chr18	+	5089	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	-80	-1	-80	1	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGATTCATTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	68433345	68457924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.10	chr18	+	1435	3	ISM	ENSMUSG00000009535.14	ENSMUST00000151833.2	2474	7	-34	6852	9	-819	5prime_fragment	FALSE	canonical	3	1040	junction_1	38	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGTGCTTCTGCATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	68433434	68441669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68433497_68438850_68439271_68440716
ES.16809.11	chr18	+	1941	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	338.489601021952	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433434	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442409_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.12	chr18	+	2041	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	338.763870564734	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACACTGCAATTCTGAG	NA	False	NA	83	True	AATAAA	-13	NA	68433436	68454973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442512_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.13	chr18	+	3296	2	NNC	ENSMUSG00000009535.14	novel	965	5	NA	NA	-14	-2445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATAAGG	NA	False	NA	NA	False	NA	NA	NA	68433448	68436820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68435975_68436050
ES.16809.14	chr18	+	2940	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	23	2045	-14	901	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAAGTTATAAT	NA	False	NA	NA	False	NA	NA	NA	68433448	68455878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.15	chr18	+	2493	7	FSM	ENSMUSG00000009535.14	ENSMUST00000151833.2	2474	7	-19	0	-13	0	multi-exon	FALSE	canonical	3	867	junction_3	84.7042239534461	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGTGAAA	NA	False	NA	NA	False	AATAGA	-5	NA	68433449	68448521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058
ES.16809.16	chr18	+	2137	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	423.654310973713	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433450	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68449780_68449884_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.17	chr18	+	3037	10	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	765	junction_7	114.643839243734	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433453	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68452291_68453296_68453331_68454388
ES.16809.18	chr18	+	5142	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	419.012317616141	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTTGATTCATTTCTA	NA	False	NA	NA	False	NA	NA	NA	68433456	68457922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68437595_68437762_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.19	chr18	+	1969	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	337.941193109097	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATACACTGCAATTCTGA	NA	False	NA	82	True	AATAAA	-12	NA	68433459	68454972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442464_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.2	chr18	+	2111	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-58	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	337.507940647328	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433367	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440722_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.20	chr18	+	4915	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	337.941193109097	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTTTGATTCATTT	NA	False	NA	NA	False	NA	NA	NA	68433460	68457919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442464_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.22	chr18	+	3322	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_11	325.487047640637	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433460	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388_68454513_68456163
ES.16809.23	chr18	+	1903	10	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	349.135581573961	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAATTCTGAGACTCTA	NA	False	NA	89	True	AATAAA	-19	NA	68433460	68454979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68438850_68439271_68440716_68440859_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.24	chr18	+	3293	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	415.884341042034	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGACTCTATAGAC	NA	False	NA	94	True	AATAAA	-24	NA	68433460	68454984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68436502_68437762_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.25	chr18	+	4873	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	35	100	-2	-99	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCAGTGTTCATGAGAC	NA	False	NA	NA	False	AATAAA	-27	NA	68433460	68457823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.26	chr18	+	5094	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	417.919265405047	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433460	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438068_68438190_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.28	chr18	+	2934	10	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	331.871609861553	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433463	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439193_68440731_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68452291_68453296_68453331_68454388
ES.16809.29	chr18	+	1959	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	1	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	338.763870564734	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGAGCTACCTGGCTA	NA	False	NA	28	True	ATTAAA	-17	NA	68433463	68454918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444684_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.3	chr18	+	2074	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	-5	2939	-5	7	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGACTCTATAGAC	NA	False	NA	94	True	AATAAA	-24	NA	68433420	68454984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.30	chr18	+	2147	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	417.919265405047	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAATTCTGAGACTCTA	NA	False	NA	89	True	AATAAA	-19	NA	68433463	68454979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438068_68438190_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.31	chr18	+	1915	11	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	489.590400232684	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGCAATTCTGAGAC	NA	False	NA	85	True	AATAAA	-15	NA	68433469	68454975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68436502_68436567_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.32	chr18	+	2245	13	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	462.905857959622	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGCAATTCTGAGAC	NA	False	NA	85	True	AATAAA	-15	NA	68433470	68454975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68436502_68436567_68437595_68437762_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.33	chr18	+	7375	10	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	4	intron_retention	FALSE	canonical	3	765	junction_6	146.590889515307	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTCTGAGACTCTATA	NA	False	NA	91	True	AATAAA	-21	NA	68433470	68454981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.34	chr18	+	2956	9	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	0	7	intron_retention	FALSE	canonical	3	25	junction_3	366.238289061917	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGACTCTATAGAC	NA	False	NA	94	True	AATAAA	-24	NA	68433470	68454984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68438850_68439271_68440716_68440859_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
ES.16809.36	chr18	+	1959	11	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	337.194617394762	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433476	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447175_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.37	chr18	+	2064	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	468.401343061501	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAATTCTGAGACTCTA	NA	False	NA	89	True	AATAAA	-19	NA	68433477	68454979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433497_68436502_68436567_68438850_68439259_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.38	chr18	+	2037	10	NIC	ENSMUSG00000009535.14	novel	1852	10	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	445.20532092258	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433480	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433695_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.39	chr18	+	5237	12	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	484.622337410643	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433481	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433695_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447134_68449706_68449884_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.4	chr18	+	1542	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	2	4522	2	1086	5prime_fragment	FALSE	canonical	3	765	junction_7	145.735681591328	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTTTTTCTGATACAT	NA	False	NA	11	True	ATTAAA	-12	NA	68433427	68453401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
ES.16809.40	chr18	+	2201	11	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	335.57288329065	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433481	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433695_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.41	chr18	+	2273	12	NNC	ENSMUSG00000009535.14	novel	965	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	417.389367734159	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433496	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68433695_68436479_68436567_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.42	chr18	+	5021	12	NNC	ENSMUSG00000009535.14	novel	965	5	NA	NA	174	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422.470107505297	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAATTCTGAGACTCTA	NA	False	NA	89	True	AATAAA	-19	NA	68433666	68454979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68435972_68436048_68436772_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.43	chr18	+	4938	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5424	0	782	0	3prime_fragment	FALSE	canonical	3	765	junction_6	146.590889515307	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68438849	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.44	chr18	+	4515	9	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	7289	4	2647	-3	3prime_fragment	FALSE	canonical	3	765	junction_5	152.848781480259	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTTTGATTCATTT	NA	False	NA	NA	False	NA	NA	NA	68440714	68457919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.45	chr18	+	7519	6	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	7359	0	2717	0	intron_retention	FALSE	canonical	3	765	junction_5	122.641917793224	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68440784	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064
ES.16809.46	chr18	+	2264	8	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	4325	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	396.058334190347	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	63	False	NA	84	True	AATAAA	-14	NA	68442392	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68442518_68444678_68444792_68446735_68446918_68447058_68448063_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.47	chr18	+	4136	6	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	13309	1	-3827	0	3prime_fragment	FALSE	canonical	3	765	junction_2	171.607225955086	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTTGATTCATTTCTA	4405	False	NA	NA	False	NA	NA	NA	68446734	68457922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.48	chr18	+	7252	2	FSM	ENSMUSG00000009535.14	ENSMUST00000139554.2	748	2	-999	-5505	-999	-102	multi-exon	FALSE	canonical	3	1300	junction_1	0	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCGGCAGTGTTCATGA	7233	False	NA	NA	False	AATAAA	-24	NA	68449562	68457820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68451183_68452188
ES.16809.49	chr18	+	3831	4	NNC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	675	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	515.286543800847	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	8907	False	NA	NA	False	NA	NA	NA	68451236	68457923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_68452291_68453296_68453331_68454388_68454513_68455304
ES.16809.5	chr18	+	3116	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	4	2946	4	0	intron_retention	FALSE	canonical	3	765	junction_7	145.735681591328	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	False	NA	87	True	AATAAA	-17	NA	68433429	68454977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296
ES.16809.6	chr18	+	1889	10	FSM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	-39	2	6	-2	multi-exon	FALSE	canonical	3	60	junction_6	337.084266125157	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGCAATTCTGAGAC	NA	False	NA	85	True	AATAAA	-15	NA	68433431	68454975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.7	chr18	+	4117	9	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	6	-3	intron_retention	FALSE	canonical	3	765	junction_7	118.399152763016	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433431	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68452291_68453296
ES.16809.8	chr18	+	2117	12	NIC	ENSMUSG00000009535.14	novel	5008	11	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	414.246084087488	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACTGCAATTCTGAGA	NA	False	NA	84	True	AATAAA	-14	NA	68433431	68454974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_68433497_68436502_68436567_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.16809.9	chr18	+	4838	10	FSM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	-39	-2947	6	1	multi-exon	FALSE	canonical	3	60	junction_6	337.084266125157	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGATTCATTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	68433431	68457924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ES.1681.1	chr1	-	4554	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	-25	3	-11	-3	multi-exon	TRUE	canonical	3	105	junction_8	37.6710681425414	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTTCTGGTTAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	156546667	156506104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ES.1681.10	chr1	-	4319	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.6257253344208	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	156546511	156506140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544500_156544551_156546435
ES.1681.11	chr1	-	4858	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	335	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	63.7945922473057	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	156546307	156506140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156545735
ES.1681.12	chr1	-	3766	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	52	714	52	-675	multi-exon	FALSE	canonical	3	105	junction_8	37.6710681425414	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTGTGTTCATTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	156546590	156506815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ES.1681.13	chr1	-	3572	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	-2	844	-2	-844	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTAGTCATCTAAGGCT	NA	False	NA	NA	False	AATATA	-18	NA	156546658	156506984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ES.1681.14	chr1	-	3004	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	33	1377	19	-1377	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAGTTTCCAGGCTAC	NA	False	NA	NA	False	NA	NA	NA	156546623	156507517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ES.1681.15	chr1	-	2465	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	-29	2096	-15	-2057	multi-exon	FALSE	canonical	3	105	junction_8	37.6710681425414	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCCCCCCACGCTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	156546671	156508197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ES.1681.16	chr1	-	1973	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	37	2522	37	-2483	multi-exon	FALSE	canonical	3	105	junction_8	37.6710681425414	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	156546605	156508623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ES.1681.17	chr1	-	1961	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	-30	2483	-30	-2483	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	156546686	156508623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ES.1681.18	chr1	-	173	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156510605	156510432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156510400_156510600
ES.1681.19	chr1	-	157	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	156521695	156521538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156521500_156521700
ES.1681.2	chr1	-	4511	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	-62	-35	-62	-4	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCTTCTGGTTAATC	NA	False	NA	NA	False	AATAAA	-23	NA	156546718	156506105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ES.1681.20	chr1	-	3275	1	NIC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	-1557	1563	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAAACACCAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	156528012	156524737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156524700_156528000
ES.1681.21	chr1	-	4570	2	NIC	ENSMUSG00000033557.18	novel	4414	8	NA	NA	-2	-179	intron_retention	FALSE	canonical	3	86	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAGAAGTTTGAATT	NA	False	NA	NA	False	AATAAA	-10	NA	156546658	156529390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156533738_156546435
ES.1681.22	chr1	-	376	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTCTGTCTTGAGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	156535065	156534689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156534700_156535100
ES.1681.23	chr1	-	263	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAAGATCAGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	156535066	156534803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156534800_156535100
ES.1681.24	chr1	-	158	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	156535064	156534906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156534900_156535100
ES.1681.4	chr1	-	4409	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.3753640766404	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	156546638	156506114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546541
ES.1681.5	chr1	-	5305	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	203	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.3753640766404	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTATAATGTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	156546439	156506114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156545446
ES.1681.6	chr1	-	4360	9	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	104	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	64.3370033495499	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTGTATAATGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	156546538	156506115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544511_156544551_156546435
ES.1681.7	chr1	-	4279	8	NNC	ENSMUSG00000033557.18	novel	4532	9	NA	NA	134	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.420602272984	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTGTATAATGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	156546508	156506115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509179_156514936_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ES.1681.8	chr1	-	4350	8	NNC	ENSMUSG00000033557.18	novel	4414	8	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.0260427989874	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	156546590	156506140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529834_156529924_156533237_156533738_156546435
ES.1681.9	chr1	-	3780	7	NIC	ENSMUSG00000033557.18	novel	4414	8	NA	NA	120	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	67.4942384372342	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	156546522	156506140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156546435
ES.16810.1	chr18	-	4174	1	Intergenic	novelGene_14012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68184266	68180092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_68180100_68184300
ES.16811.1	chr18	-	9560	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	103	-12	-28	12	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTGTATATATTTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	68433301	68393245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.10	chr18	-	3169	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	114	6368	-17	-6368	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGAGATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	68433290	68399625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.11	chr18	-	2135	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	79	7437	-52	-7437	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCGATGACTGCAGAGT	NA	False	NA	NA	False	AAAAAG	-32	NA	68433325	68400694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.12	chr18	-	1964	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	124	7563	-7	-7563	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTAGTGTTGTGGCTCA	NA	False	NA	NA	False	AAAACA	-19	NA	68433280	68400820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.13	chr18	-	1872	5	NNC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-17	7781	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	93.7469999519985	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTATTCCTTCTCAGT	NA	False	NA	NA	False	TTTAAA	-38	NA	68433290	68401206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412622_68433144
ES.16811.14	chr18	-	1603	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	77	7971	-54	7759	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTCAACTTACAGTTT	NA	False	NA	NA	False	AATGAA	-30	NA	68433327	68401228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.15	chr18	-	1717	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-42	7723	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAATGGATCTTTTAA	NA	False	NA	NA	False	TATAAA	-19	NA	68433315	68401264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
ES.16811.2	chr18	-	1386	1	ISM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	35535	3226	35404	-3226	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGTACGTGAGACTCTAA	NA	False	NA	NA	False	NA	NA	NA	68397869	68396483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_68396500_68397900
ES.16811.3	chr18	-	5303	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	98	4250	-33	-4250	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTGACTTGGGGAAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	68433306	68397507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.4	chr18	-	3988	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	77	5586	-54	-5586	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCCCTGACCTATTTAA	NA	False	NA	3	True	AATAAA	-21	NA	68433327	68398843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.5	chr18	-	6023	4	NNC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	18505	-5586	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	92.4854342886249	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCCCTGACCTATTTAA	NA	False	NA	3	True	AATAAA	-21	NA	68414768	68398843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412550
ES.16811.6	chr18	-	4107	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-17	-5592	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTTCTCCCTGACCT	NA	False	NA	-3	True	AATAAA	-15	NA	68433290	68398849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
ES.16811.7	chr18	-	3444	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	80	6127	-51	-6127	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCCGAGTTCTCCATT	NA	False	NA	-2	True	AATAAA	-18	NA	68433324	68399384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.8	chr18	-	3405	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	-5	6251	-5	-6251	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCATTATTGAGAGCC	NA	False	NA	NA	False	AATAAA	-25	NA	68433409	68399508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ES.16811.9	chr18	-	3560	5	NNC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	-7	-6251	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	93.7469999519985	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCATTATTGAGAGCC	NA	False	NA	NA	False	AATAAA	-25	NA	68433280	68399508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412622_68433144
ES.16812.1	chr18	+	4066	2	FSM	ENSMUSG00000007480.6	ENSMUST00000172148.4	3904	2	-163	1	-163	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGAATTGGTCATTTG	NA	False	NA	NA	False	AATAAA	-38	NA	68470503	68475516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68470797_68471743
ES.16812.2	chr18	+	2406	2	FSM	ENSMUSG00000007480.6	ENSMUST00000239469.2	1162	2	-159	-1085	-152	1085	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTACCTGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	68470514	68473867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_68470797_68471743
ES.16813.1	chr18	+	7806	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	-49	-39	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.7490816425648	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACACTTTTTTCATT	1568	False	NA	NA	False	AATAAA	-21	NA	69477167	69820999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.10	chr18	+	2393	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114982.8	3694	20	75	1226	23	23	multi-exon	FALSE	canonical	2	4	junction_1	28.7490816425648	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTTGAGGGACGACTT	3267	False	NA	139	True	NA	NA	NA	69478866	69816371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.12	chr18	+	3682	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-338	-1152	-151	34	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAAAAAGAAAGTCAAG	3493	False	NA	NA	False	NA	NA	NA	69479092	69817448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.13	chr18	+	3196	21	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-102	225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.0138641841312	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATTTTTTTTTTTGTC	3542	False	NA	NA	False	AAGAAA	-15	NA	69479141	69816929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69693411_69693494_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.14	chr18	+	3458	20	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-99	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	22.4224116217745	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACACTTTTTTC	3545	False	NA	NA	False	AATAAA	-18	NA	69479144	69820996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69819867
ES.16813.16	chr18	+	3666	21	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-35	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	30.1268567892504	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACACTTTTTTC	3609	False	NA	NA	False	AATAAA	-18	NA	69479208	69820996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147_69816423_69819867
ES.16813.18	chr18	+	3545	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	427	-986	-27	33	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAAAAAAGAAAGTCAA	3617	False	NA	NA	False	NA	NA	NA	69479216	69817447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.19	chr18	+	3019	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-26	221	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	28.3743280638466	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGATTTTTTTTTT	3618	False	NA	NA	False	AAGAAA	-11	NA	69479217	69816925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.2	chr18	+	3588	20	NNC	ENSMUSG00000053477.19	novel	4250	21	NA	NA	-49	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6330301489812	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAGAAAGTCAAGTT	1568	False	NA	NA	False	NA	NA	NA	69477167	69817450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69477416_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.20	chr18	+	3370	20	NNC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-22	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6330301489812	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGGAAAAAATACAAAAAT	3622	False	NA	NA	False	AATACA	-14	NA	69479221	69817393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479309_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.21	chr18	+	3522	20	NNC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-22	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.4522898593429	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	3622	False	NA	NA	False	NA	NA	NA	69479221	69817440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697713_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.23	chr18	+	7096	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-204	-4700	-17	-42	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACACTTTTTTC	3627	False	NA	NA	False	AATAAA	-18	NA	69479226	69820996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.24	chr18	+	7724	8	ISM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-202	111591	-15	5892	5prime_fragment	FALSE	canonical	3	47	junction_6	13.3033676877975	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3629	False	NA	NA	False	NA	NA	NA	69479228	69704705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705
ES.16813.25	chr18	+	4458	19	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.6696227782628	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACAAGCATTTAGTCTT	3629	False	NA	NA	False	TATAAA	-3	NA	69479228	69822142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69819867
ES.16813.26	chr18	+	4348	20	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	-13	668	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	26.5128411891754	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAAATTTATGTTCA	3631	False	NA	NA	False	AAAAAG	-28	NA	69479230	69818267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.27	chr18	+	5352	21	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-5	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	27.9361325168678	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCTGACACTTTT	3639	False	NA	NA	False	AATAAA	-15	NA	69479238	69820993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147_69818139_69819867
ES.16813.28	chr18	+	1812	17	NNC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	11	752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	20.2097400713122	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGGATTCCTGTAAC	3655	False	NA	NA	False	AATAAA	-17	NA	69479254	69809553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69809426
ES.16813.29	chr18	+	6519	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-170	-4157	17	-585	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGATTCTGAGTATTTC	3661	False	NA	NA	False	NA	NA	NA	69479260	69820453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.3	chr18	+	4268	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	-48	48	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.7490816425648	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGTTCAAAAACCGTCA	1569	False	NA	NA	False	NA	NA	NA	69477168	69817462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.31	chr18	+	3335	18	NIC	ENSMUSG00000053477.19	novel	2986	20	NA	NA	21	30	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.0124430881796	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAAGAAAGT	3665	False	NA	NA	False	NA	NA	NA	69479264	69817444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.33	chr18	+	3394	19	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	23	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.7849090263339	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAATACAAAAATTAA	3667	False	NA	NA	False	AATACA	-17	NA	69479266	69817396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.35	chr18	+	7039	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	485	-4538	31	-39	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACACTTTTTTCATT	3675	False	NA	NA	False	AATAAA	-21	NA	69479274	69820999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.37	chr18	+	3411	20	NNC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	-77	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.7985649073043	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAAAAAGAAAGTCAAG	3754	False	NA	NA	False	NA	NA	NA	69479353	69817448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598431_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.38	chr18	+	3459	20	NNC	ENSMUSG00000053477.19	novel	1959	17	NA	NA	175	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2799081178644	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATACAAAAATTAAAA	4006	False	NA	NA	False	AATACA	-19	NA	69479605	69817398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479789_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.39	chr18	+	3378	20	NNC	ENSMUSG00000053477.19	novel	1959	17	NA	NA	313	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9134257111158	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAAAAGAAAGTCA	4144	False	NA	NA	False	NA	NA	NA	69479743	69817446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479789_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.4	chr18	+	4213	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114985.10	8577	20	-388	4752	-45	-16	multi-exon	FALSE	canonical	2	4	junction_1	28.0844590851464	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATACAAAAATTAAAA	1572	False	NA	NA	False	AATACA	-19	NA	69477171	69817398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.40	chr18	+	3378	20	NNC	ENSMUSG00000053477.19	novel	1959	17	NA	NA	412	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6330301489812	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAAAAAAGAAAGTCAAG	4243	False	NA	NA	False	NA	NA	NA	69479842	69817448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69479883_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.41	chr18	+	3247	19	NNC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	22	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	29.4170207721841	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGTTCAAAAACCGTCA	4792	False	NA	NA	False	NA	NA	NA	69480391	69817462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808832_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.42	chr18	+	3335	19	NIC	ENSMUSG00000053477.19	novel	2660	19	NA	NA	35	26	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.3135455142718	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	5775	False	NA	NA	False	NA	NA	NA	69481374	69817440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69481472_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.43	chr18	+	3129	16	NIC	ENSMUSG00000053477.19	novel	2172	16	NA	NA	44	30	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.0309572479847	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	69633950	69817444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69634070_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.44	chr18	+	2190	13	NNC	ENSMUSG00000053477.19	novel	2437	13	NA	NA	-12	-636	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	30.9793838257352	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTCGCAGGAGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	69726471	69820402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69819867
ES.16813.45	chr18	+	2949	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	416	-928	-9	30	multi-exon	FALSE	canonical	3	8	junction_1	33.3437483729043	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	69726474	69817444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.47	chr18	+	2333	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	430	-326	-1	138	multi-exon	FALSE	canonical	3	8	junction_1	33.3437483729043	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	69726488	69816842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.48	chr18	+	2673	1	FSM	ENSMUSG00000053477.19	ENSMUST00000201892.2	4019	1	1346	0	591	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACGAA	NA	False	NA	NA	False	NA	NA	NA	69727843	69730516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69727800_69730500
ES.16813.49	chr18	+	3205	8	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	191	22882	191	25	5prime_fragment	FALSE	canonical	1	2	junction_1	24.407258873423	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCTACCCCTAACAAC	NA	False	NA	NA	False	AAAAAG	-40	NA	69745705	69793387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69745744_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817
ES.16813.5	chr18	+	3766	20	NNC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	-69	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	30.0950479540628	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTCTGACACTTTT	1891	False	NA	NA	False	AATAAA	-15	NA	69477490	69820993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69819867
ES.16813.50	chr18	+	2773	4	ISM	ENSMUSG00000053477.19	ENSMUST00000201964.4	843	8	56995	-2485	-5490	-41	3prime_fragment	FALSE	canonical	3	59	junction_1	5.18544972870135	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	69784247	69793321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69784361_69785464_69785544_69788031_69788109_69790817
ES.16813.51	chr18	+	3151	2	NNC	ENSMUSG00000053477.19	novel	765	7	NA	NA	316	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCTACCCCTAACAAC	NA	False	NA	NA	False	AAAAAG	-40	NA	69790053	69793387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_69791053_69791235
ES.16813.52	chr18	+	2920	2	Intergenic	novelGene_14016	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGGCCTGAGAATC	NA	False	NA	NA	False	AAAAAG	-45	NA	69803009	69808243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_69803042_69805355
ES.16813.53	chr18	+	2080	5	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	63148	-1193	-4107	48	3prime_fragment	FALSE	canonical	3	43	junction_2	40.9351621469856	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGTTCAAAAACCGTCA	NA	False	NA	NA	False	NA	NA	NA	69808662	69817462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.54	chr18	+	1183	5	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	63185	-333	-4070	82	3prime_fragment	FALSE	canonical	3	43	junction_2	40.9351621469856	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACGACATGAACGTT	NA	False	NA	NA	False	AAAAAG	-11	NA	69808699	69816602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.55	chr18	+	3394	5	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	82817	-2461	-3894	1378	3prime_fragment	FALSE	canonical	3	57	junction_2	36.2655139216308	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGAGATTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	69808875	69818977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.56	chr18	+	1274	4	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	65466	-573	-1789	138	3prime_fragment	FALSE	canonical	3	43	junction_1	45.7626728046147	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	69810980	69816842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.57	chr18	+	1266	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84942	-326	-1769	138	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	69811000	69816842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.58	chr18	+	1810	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84952	-880	-1759	-18	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAATACAAAAATTAA	NA	False	NA	NA	False	AATACA	-17	NA	69811010	69817396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.59	chr18	+	5400	4	ISM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	84962	-4480	-1749	-42	3prime_fragment	FALSE	canonical	3	57	junction_1	39.4067112163511	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACACTTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	69811020	69820996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.6	chr18	+	3774	19	NIC	ENSMUSG00000053477.19	novel	2779	19	NA	NA	-7	30	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.9652061605942	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAAGAAAGT	1953	False	NA	NA	False	NA	NA	NA	69477552	69817444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69478097_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16813.60	chr18	+	2987	3	FSM	ENSMUSG00000053477.19	ENSMUST00000146908.2	3693	3	546	160	546	25	multi-exon	FALSE	canonical	3	123	junction_1	14	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAACTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69813315	69817439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69814870_69815753_69815895_69816147
ES.16813.61	chr18	+	1532	2	FSM	ENSMUSG00000053477.19	ENSMUST00000136019.3	1001	2	205	-736	205	26	multi-exon	FALSE	canonical	3	151	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAACTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	69815655	69817440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69815895_69816147
ES.16813.62	chr18	+	3273	1	ISM	ENSMUSG00000053477.19	ENSMUST00000114985.10	8577	20	339134	2184	1243	-1072	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAACA	NA	False	NA	NA	False	CATAAA	-39	NA	69816693	69819966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69816700_69820000
ES.16813.63	chr18	+	2685	1	ISM	ENSMUSG00000053477.19	ENSMUST00000114985.10	8577	20	340508	1398	2617	-286	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAACGTTTTAAAAAAA	NA	False	NA	NA	False	ATTAAA	-37	NA	69818067	69820752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_69818100_69820800
ES.16813.7	chr18	+	4675	20	NIC	ENSMUSG00000053477.19	novel	8577	20	NA	NA	9	664	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	30.4169547412964	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAATCTGAAATTTATG	1972	False	NA	NA	False	AAAAAG	-24	NA	69477571	69818263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697107_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.8	chr18	+	3584	20	FSM	ENSMUSG00000053477.19	ENSMUST00000078486.13	7147	20	-29	3592	-27	32	multi-exon	FALSE	canonical	2	4	junction_1	28.0844590851464	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAAAAGAAAGTCA	3163	False	NA	NA	False	NA	NA	NA	69478762	69817446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ES.16813.9	chr18	+	7034	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114982.8	3694	20	59	-3399	7	-42	multi-exon	FALSE	canonical	2	4	junction_1	28.7490816425648	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTGACACTTTTTTC	3251	False	NA	NA	False	AATAAA	-18	NA	69478850	69820996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ES.16814.1	chr18	-	4044	1	Intergenic	novelGene_14013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAGGGGGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	69502462	69498418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69498400_69502500
ES.16814.2	chr18	-	2493	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAGGGGGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	69501012	69498418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69500547_69500647
ES.16814.3	chr18	-	2510	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAGGGGGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	69501012	69498418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69500564_69500647
ES.16814.4	chr18	-	2479	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAGGGGGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	69501012	69498418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69500541_69500655
ES.16814.5	chr18	-	2452	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69501012	69498445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69500557_69500671
ES.16815.1	chr18	-	3853	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGAAGGTCTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	69543227	69537127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69539845_69542091
ES.16816.1	chr18	-	3094	1	Intergenic	novelGene_14014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATTTACCAAAGTGATC	NA	False	NA	NA	False	NA	NA	NA	69580718	69577624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69577600_69580700
ES.16817.1	chr18	-	7266	1	Intergenic	novelGene_14015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAGATTTCTTTGCATA	NA	False	NA	NA	False	NA	NA	NA	69648106	69640840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69640800_69648100
ES.16818.1	chr18	-	1724	2	Antisense	novelGene_ENSMUSG00000053477.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGGAAAAGAA	NA	False	NA	NA	False	AATAAA	-39	NA	69697776	69695581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_69697234_69697704
ES.16819.1	chr18	-	2453	2	Intergenic	novelGene_14017	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGGTCTTGCAGCCTTG	NA	False	NA	NA	False	AATAAA	-13	NA	69890261	69887756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69888226_69888277
ES.1682.1	chr1	-	184	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAATGCTAATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	156571223	156571039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156571000_156571200
ES.16820.1	chr18	-	7184	1	Intergenic	novelGene_14018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAAGAAATGCGCTTTA	NA	False	NA	NA	False	AATAGA	-37	NA	69907178	69899994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69900000_69907200
ES.16821.1	chr18	-	585	1	Intergenic	novelGene_14019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	69929267	69928682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_69928700_69929300
ES.16822.1	chr18	+	140	1	Intergenic	novelGene_14020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATTTCAAGATT	NA	False	NA	NA	False	NA	NA	NA	69962795	69962935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_69962800_69962900
ES.16823.1	chr18	+	2431	3	Intergenic	novelGene_14021	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGGGAACTTCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	69966661	69978453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_69966838_69970354_69970454_69976297
ES.16823.2	chr18	+	485	2	Intergenic	novelGene_14022	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTCTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69966686	69967867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_69966838_69967533
ES.16824.1	chr18	+	1934	13	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-575	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	12.9836970424024	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70057921	70102555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70058085_70058478_70058692_70063209_70063305_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16824.2	chr18	+	1837	12	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-574	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.4660836548564	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATGTCCTTCCATGT	NA	False	NA	6	True	AATAAA	-17	NA	70057922	70102558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70058085_70058478_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16824.3	chr18	+	1716	12	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-563	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.0877521445949	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70057933	70102555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70058061_70058478_70058605_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16824.4	chr18	+	1845	12	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-553	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0151419618595	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70057943	70102555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70058085_70058446_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16824.6	chr18	+	916	7	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	-6	12194	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	8.03464719546263	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCATGACTCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	70058634	70089309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052
ES.16824.7	chr18	+	1384	10	NIC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.8332029205125	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCTCATGTCCTTCC	NA	False	NA	2	True	AATAAA	-13	NA	70058640	70102554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_70058692_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16824.8	chr18	+	543	4	ISM	ENSMUSG00000038903.14	ENSMUST00000080050.6	1235	8	-5	25480	1	-40	5prime_fragment	FALSE	canonical	3	15	junction_1	8.16496580927726	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTACTACTGAAGAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	70058641	70077075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798
ES.16824.9	chr18	+	3383	8	ISM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	16122	4	16012	-4	3prime_fragment	FALSE	canonical	3	19	junction_3	8.53085635819064	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCACAGTCTCATGTCCT	NA	False	NA	-1	True	AATAAA	-10	NA	70074658	70102551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ES.16825.1	chr18	-	2458	6	FSM	ENSMUSG00000024511.16	ENSMUST00000069749.9	2671	6	208	5	208	-5	multi-exon	FALSE	canonical	0	0	junction_2	1.16619037896906	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGCTTCGAGTTTTC	NA	False	NA	NA	False	AATATA	-13	NA	70186451	70116731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70118449_70119982_70120107_70122614_70122719_70127547_70127634_70129139_70129312_70186196
ES.16826.1	chr18	+	1201	7	NNC	ENSMUSG00000079608.11	novel	1496	9	NA	NA	-508	484	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.97202659436654	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACATGCTAGGCTCTTGT	NA	False	NA	NA	False	NA	NA	NA	70605016	70616989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70605081_70605387_70605640_70606272_70606426_70607355_70607437_70609170_70609265_70609452_70609503_70616482
ES.16827.1	chr18	+	4377	2	Genic_Genomic	ENSMUSG00000098721.3	novel	104	1	NA	NA	-10095	365	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCCTGGTAAAATATAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	70639761	70650325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_70643192_70649378
ES.16828.1	chr18	+	6337	1	Antisense	novelGene_ENSMUSG00000038425.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-7	NA	70655345	70661682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_70655300_70661700
ES.16829.1	chr18	-	3887	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	391	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGGTCAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	70605551	70584891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.10	chr18	-	3272	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-318	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	65.9430388668887	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605898	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.11	chr18	-	3122	2	ISM	ENSMUSG00000044906.7	ENSMUST00000213066.2	1569	4	5733	-1	5733	1	intron_retention	FALSE	canonical	3	226	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70591488	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_70586460_70589544
ES.16829.12	chr18	-	3577	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	-357	-929	-328	1	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605908	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.13	chr18	-	2961	7	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	81.9317127585867	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605549	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70597032_70597136_70600405_70600557_70600829_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.14	chr18	-	3358	8	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_5	89.3260480327147	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605548	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602568_70602849_70604830_70605051_70605361
ES.16829.15	chr18	-	3096	7	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-340	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	91.3590292320481	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605920	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605052_70605361
ES.16829.16	chr18	-	3437	9	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	37	1	intron_retention	TRUE	non_canonical	0	0	junction_6	99.9899213671058	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605389	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597085_70597157_70597360_70600401_70601589_70602568_70602849_70604743_70605051_70605361
ES.16829.17	chr18	-	3463	8	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	4	1	intron_retention	FALSE	canonical	2	10	junction_5	76.4495298366504	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605571	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.18	chr18	-	2439	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	78.7035253210375	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605579	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70602573_70602849_70604743_70605051_70605361
ES.16829.20	chr18	-	4433	7	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-5	1	intron_retention	FALSE	canonical	3	82	junction_4	49.6848400755536	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605556	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70602849_70604743_70605051_70605361
ES.16829.21	chr18	-	3537	5	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-317	1	intron_retention	FALSE	canonical	1	3	junction_1	88.8608462710096	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605897	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.22	chr18	-	3265	10	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.4998430632632	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70598104_70598151_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.23	chr18	-	3429	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_5	78.9877283157947	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602586_70602849_70604743_70605051_70605361
ES.16829.24	chr18	-	3323	7	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	11	0	intron_retention	FALSE	canonical	1	2	junction_2	95.5893996912489	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605564	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70597032_70597136_70600401_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.25	chr18	-	2716	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	70.5832841400852	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605510	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601291_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.28	chr18	-	3293	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-322	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	72.5343668546159	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605902	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601106_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.29	chr18	-	2985	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.3736525584372	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605545	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601061_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.3	chr18	-	6766	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-2	2	intron_retention	FALSE	canonical	3	180	junction_6	19.2959408512084	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605553	70585280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.30	chr18	-	3713	8	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_4	73.2471354876275	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605544	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597360_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.31	chr18	-	3293	6	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	81.2782873835319	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605551	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.32	chr18	-	3283	10	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	91.8477000256403	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605544	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597085_70597157_70597360_70600401_70600557_70600913_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.33	chr18	-	3091	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.4369836725942	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605468	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600829_70601589_70602568_70602849_70604743_70605051_70605361
ES.16829.34	chr18	-	6669	7	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_5	75.3827271697937	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605545	70585282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70601589_70602519_70602849_70604830_70605051_70605361
ES.16829.36	chr18	-	3131	5	NNC	ENSMUSG00000044906.7	novel	3317	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	102.228909805397	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605551	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70600405_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.37	chr18	-	3097	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.7296094542772	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605550	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600895_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.38	chr18	-	3358	7	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_2	83.9201008896756	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605546	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.39	chr18	-	2931	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	89.2201455670187	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605429	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600829_70601589_70602573_70602849_70604743_70604936_70605361
ES.16829.4	chr18	-	3512	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-328	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.3770229704095	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605908	70585280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600895_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.42	chr18	-	2914	6	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	86.84607072286	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605553	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.43	chr18	-	3166	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_5	78.2701873143423	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605551	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70604743_70605051_70605361
ES.16829.44	chr18	-	3021	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	77.1463256127961	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605557	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.46	chr18	-	2922	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	88.2907129883999	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605582	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601106_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.47	chr18	-	7411	3	ISM	ENSMUSG00000044906.7	ENSMUST00000213066.2	1569	4	-330	1	-330	0	intron_retention	FALSE	canonical	3	185	junction_2	20.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70597551	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_70586460_70589544_70589616_70591387
ES.16829.48	chr18	-	1801	6	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	82.1690939465685	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605529	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70605361
ES.16829.5	chr18	-	3849	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	-322	2	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605902	70585280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.50	chr18	-	2792	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	89.4201273968756	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605548	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.51	chr18	-	7687	6	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	180	junction_5	20.9952375552171	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605546	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70602849_70604743_70605051_70605361
ES.16829.52	chr18	-	3512	6	NNC	ENSMUSG00000044906.7	novel	3317	6	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_2	98.1007645230148	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605551	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70597032_70597360_70600405_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.54	chr18	-	2155	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	94.7462777256032	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605458	70585283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70602573_70602849_70604743_70604890_70605361
ES.16829.58	chr18	-	5240	7	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_4	78.766356326092	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605573	70585285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70599607_70602849_70604743_70605051_70605361
ES.16829.59	chr18	-	3082	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.2480924583812	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605556	70585285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70597043_70597136_70600401_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.6	chr18	-	3401	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	2	intron_retention	FALSE	canonical	0	0	junction_6	73.6608333332371	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTACGTCTCCTTT	NA	False	NA	0	True	AATAAA	-20	NA	70605545	70585280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604830_70605051_70605361
ES.16829.60	chr18	-	6437	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	10	junction_5	77.964146652582	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605556	70585285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70600557_70600829_70601589_70602573_70602849_70604743_70605051_70605361
ES.16829.61	chr18	-	3390	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_3	78.2149815146263	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605551	70585285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70600401_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.62	chr18	-	3143	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	77.7142200629975	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATATGTTGTTACGTCT	NA	False	NA	-5	True	AATAAA	-15	NA	70605545	70585285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602586_70602849_70604743_70605051_70605361
ES.16829.68	chr18	-	2482	1	NIC	ENSMUSG00000044906.7	novel	3317	6	NA	NA	-707	2599	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGCATGCAG	NA	False	NA	NA	False	CATAAA	-34	NA	70597928	70595446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70595400_70597900
ES.16829.69	chr18	-	1883	3	NIC	ENSMUSG00000044906.7	novel	4393	4	NA	NA	44	-2113	intron_retention	FALSE	canonical	2	3	junction_1	88.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATAGTGATATTGAAT	NA	False	NA	NA	False	CATAAA	-15	NA	70605507	70600158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70601589_70604743_70605051_70605361
ES.16829.70	chr18	-	2261	4	FSM	ENSMUSG00000044906.7	ENSMUST00000237800.2	4393	4	18	2114	-6	-2114	multi-exon	FALSE	canonical	3	180	junction_3	21.483844059096	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATAGTGATATTGAA	NA	False	NA	NA	False	CATAAA	-14	NA	70605557	70600159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.71	chr18	-	1179	4	FSM	ENSMUSG00000044906.7	ENSMUST00000237800.2	4393	4	24	3190	0	-3190	multi-exon	FALSE	canonical	3	180	junction_3	21.483844059096	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATCTTTTCCTAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	70605551	70601235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
ES.16829.8	chr18	-	3059	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	78.6527176898548	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605551	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70604890_70605361
ES.16829.9	chr18	-	3489	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	-324	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	63.814060950546	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTACGTCTCCTT	NA	False	NA	-1	True	AATAAA	-19	NA	70605904	70585281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600913_70601589_70602519_70602849_70604743_70605051_70605361
ES.1683.1	chr1	-	1720	1	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGAGTTTGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	156598096	156596376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156596400_156598100
ES.16830.1	chr18	-	6874	6	Antisense	novelGene_ENSMUSG00000079608.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGTCTGTAATGAATA	9501	False	NA	NA	False	NA	NA	NA	70638574	70608027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_70609501_70616477_70616609_70629183_70629302_70631616_70631712_70633471_70636591_70636636
ES.16830.10	chr18	-	2557	11	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	128.501984420475	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTCACTGTAAGTTG	NA	False	NA	-14	True	AATAAA	-21	NA	70663339	70641752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70657801_70657932_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.11	chr18	-	7018	7	NIC	ENSMUSG00000038425.19	novel	2591	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	116	junction_6	74.9103167498013	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTCTCACTGTAAGT	NA	False	NA	-16	True	AATAAA	-19	NA	70663333	70641754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
ES.16830.12	chr18	-	2868	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-137	5	-7	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663346	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.13	chr18	-	3471	10	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.027009058374	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663312	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655005_70655772_70655952_70656233_70656471_70657801_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.15	chr18	-	4796	9	NIC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	41	0	intron_retention	FALSE	canonical	3	36	junction_8	99.3635213496382	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663298	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.16	chr18	-	4200	5	ISM	ENSMUSG00000038425.19	ENSMUST00000159389.8	2662	10	4720	0	4720	0	intron_retention	FALSE	canonical	3	265	junction_2	45.0742443086958	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70658489	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772
ES.16830.17	chr18	-	9653	5	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	116	junction_4	85.4996345021428	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663331	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70658600_70659627_70659793_70663258
ES.16830.18	chr18	-	4392	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	102	junction_8	80.6410836670738	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGCTCTCACTGTAAG	NA	False	NA	-17	True	AATAAA	-18	NA	70663331	70641755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.19	chr18	-	2749	10	NNC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	126.601542712891	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGCTCTCACTGTAA	NA	False	NA	-18	True	AATAAA	-17	NA	70663329	70641756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656334_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.2	chr18	-	4958	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	7	7608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.726728456024	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	GATAAA	-32	NA	70663332	70634142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70636317_70641262_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
ES.16830.20	chr18	-	2932	9	NIC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	117.751592345921	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663330	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70657801_70658600_70659627_70659793_70663258
ES.16830.21	chr18	-	3456	8	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	102	junction_7	85.143336527893	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663331	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.22	chr18	-	2456	10	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	108.067651422387	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663341	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.23	chr18	-	2582	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	103.753982520619	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663315	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70662083_70663258
ES.16830.24	chr18	-	2337	9	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	112.236357745608	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663348	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70663258
ES.16830.26	chr18	-	3791	9	ISM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	-139	7	-9	0	intron_retention	FALSE	canonical	3	234	junction_8	45.9401784933407	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663348	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772
ES.16830.27	chr18	-	3461	10	FSM	ENSMUSG00000038425.19	ENSMUST00000160713.2	3504	10	43	0	43	0	multi-exon	FALSE	canonical	3	11	junction_6	123.922118114664	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663296	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70657801_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.28	chr18	-	2798	11	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.707275452982	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663340	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70653743_70654119_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.29	chr18	-	2931	11	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	136.080270428891	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663281	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70657801_70657932_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ES.16830.30	chr18	-	3030	10	NIC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	113.085786293983	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663302	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70657801_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.31	chr18	-	2264	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	122.18678068842	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663334	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70659627_70659793_70661772_70661899_70663258
ES.16830.32	chr18	-	2703	9	NIC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	108.347747438514	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663309	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70662821
ES.16830.33	chr18	-	2463	11	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	127.219338152657	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663331	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70662030_70662083_70663258
ES.16830.34	chr18	-	2339	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.712369922427	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663330	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70649997_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661896_70663258
ES.16830.35	chr18	-	2234	9	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	120.320405584423	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663328	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658497_70658600_70659627_70659793_70663258
ES.16830.36	chr18	-	2297	9	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	120.882109408299	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663441	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656334_70656471_70658446_70658600_70659627_70659793_70663258
ES.16830.37	chr18	-	3154	10	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.445225539474	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663350	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70658903_70659793_70661772_70661896_70663258
ES.16830.38	chr18	-	4277	8	NIC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	116	junction_7	80.1406926114624	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	70663344	70641757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70658600_70659627_70659793_70663258
ES.16830.4	chr18	-	2362	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	-52	7	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAAGTTGTGAGACAGA	NA	False	NA	-5	True	AATAAA	-30	NA	70663391	70641743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
ES.16830.41	chr18	-	2327	9	NNC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	120.401152403123	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACTAGGCTCTCACTG	NA	False	NA	-21	True	AATAAA	-14	NA	70663337	70641759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659592_70659793_70663258
ES.16830.5	chr18	-	3013	10	NNC	ENSMUSG00000038425.19	novel	2736	10	NA	NA	44	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	104.325464145317	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAAGTTGTGAGACAGA	NA	False	NA	-5	True	AATAAA	-30	NA	70663295	70641743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70662083_70662821
ES.16830.6	chr18	-	5424	8	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	102	junction_7	86.2071543979254	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCACTGTAAGTTGTG	NA	False	NA	-12	True	AATAAA	-23	NA	70663330	70641750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70659793_70661772_70661899_70663258
ES.16830.7	chr18	-	2460	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	134	-3	-32	-1	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTCACTGTAAGTTGT	NA	False	NA	-13	True	AATAAA	-22	NA	70663371	70641751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ES.16830.8	chr18	-	3446	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	9	1	intron_retention	FALSE	canonical	3	102	junction_8	80.9502161825402	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTCACTGTAAGTTG	NA	False	NA	-14	True	AATAAA	-21	NA	70663330	70641752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70659793_70661772_70661899_70663258
ES.16830.9	chr18	-	2786	10	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	129.690609995434	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTCACTGTAAGTTG	NA	False	NA	-14	True	AATAAA	-21	NA	70663315	70641752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658497_70658600_70659627_70659793_70661772_70661896_70662821
ES.16831.1	chr18	+	1372	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	15	-64	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	161	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTCTGATTCCAGAAGGG	NA	False	NA	4	True	NA	NA	NA	70701274	70715919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713723_70713884_70715471
ES.16831.10	chr18	+	1599	7	NNC	ENSMUSG00000024513.17	novel	1953	7	NA	NA	126	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.311556547125	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATTGGAACTTCTTT	NA	False	NA	14	True	AATAAA	-14	NA	70701530	70759198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713802_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
ES.16831.11	chr18	+	4132	7	NNC	ENSMUSG00000024513.17	novel	1953	7	NA	NA	188	3000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	114.400976103062	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCGTTTGTGTAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	70701592	70762202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713723_70713888_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70759226
ES.16831.12	chr18	+	3853	1	NIC	ENSMUSG00000024513.17	novel	1953	7	NA	NA	-1725	4	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTGCCTGGTGTTTTC	NA	False	NA	17	True	AATAAA	-34	NA	70712134	70715987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_70712100_70716000
ES.16831.2	chr18	+	2957	2	ISM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-60	-3	-60	3	intron_retention	FALSE	canonical	3	332	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701344	70715986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_70702039_70713723
ES.16831.3	chr18	+	1352	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	-59	-3	-59	3	multi-exon	FALSE	canonical	3	203	junction_2	64.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701345	70715986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_70702039_70713723_70713884_70715487
ES.16831.4	chr18	+	1270	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGAAGTGCCTGGTGT	NA	False	NA	13	True	AATAAA	-30	NA	70701354	70715983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702032_70713723_70713884_70715550
ES.16831.5	chr18	+	1272	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	140	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701362	70715986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713723_70713884_70715550
ES.16831.6	chr18	+	1847	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	106	0	-39	0	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	70701365	70759202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
ES.16831.7	chr18	+	4846	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	107	-3000	-38	3000	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCGTTTGTGTAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	70701366	70762202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
ES.16831.8	chr18	+	1280	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	155	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGCCTGGTGTTTT	NA	False	NA	16	True	AATAAA	-33	NA	70701378	70715986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713723_70713884_70715526
ES.16831.9	chr18	+	1051	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	99	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAAGTGCCTGGTGTTT	NA	False	NA	15	True	AATAAA	-32	NA	70701503	70715985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_70702039_70713802_70713884_70715550
ES.16832.1	chr18	-	264	1	Intergenic	novelGene_14023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCAGTTCCCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	70754989	70754725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_70754700_70755000
ES.16833.1	chr18	-	175	1	Intergenic	novelGene_14024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATGAGATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	71058963	71058788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_71058800_71059000
ES.16834.1	chr18	-	180	1	Intergenic	novelGene_14025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGTAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	73623977	73623797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_73623800_73624000
ES.16835.1	chr18	+	196	1	Intergenic	novelGene_14026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGTCAAAATA	NA	False	NA	NA	False	NA	NA	NA	73682241	73682437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_73682200_73682400
ES.16836.1	chr18	+	181	1	Intergenic	novelGene_14027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACCCCCCATTGTCAT	NA	False	NA	NA	False	NA	NA	NA	73697832	73698013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_73697800_73698000
ES.16837.1	chr18	+	4173	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	-435	0	-435	0	multi-exon	FALSE	canonical	3	119	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	NA	False	NA	36	True	AATAAA	-23	NA	73705679	73725646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_73706848_73722641
ES.16837.10	chr18	+	3686	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-220	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTATTCTCCTTGGTGTT	NA	False	NA	34	True	AATAAA	-21	NA	73705894	73725644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706064_73706333_73706848_73722641
ES.16837.12	chr18	+	3521	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-101	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTTGAATGTATTCTC	NA	False	NA	25	True	AATAAA	-12	NA	73706013	73725635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706078_73706384_73706848_73722641
ES.16837.13	chr18	+	1108	2	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-84	-15599	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATTAGAAATTAAGAGA	NA	False	NA	NA	False	AATAAA	-24	NA	73706030	73710047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706848_73709756
ES.16837.14	chr18	+	2997	1	NIC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	16526	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGAATGTATTCTCCT	NA	False	NA	27	True	AATAAA	-14	NA	73722640	73725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_73722600_73725600
ES.16837.2	chr18	+	3649	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-339	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAATGTATTCTCCTT	NA	False	NA	28	True	AATAAA	-15	NA	73705775	73725638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73705905_73706328_73706852_73722641
ES.16837.3	chr18	+	3138	2	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-298	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGAATGTATTCTCCT	NA	False	NA	27	True	AATAAA	-14	NA	73705816	73725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706511_73723193
ES.16837.4	chr18	+	3722	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-257	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTATTCTCCTTGGTG	NA	False	NA	32	True	AATAAA	-19	NA	73705857	73725642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706059_73706327_73706848_73722641
ES.16837.5	chr18	+	5221	1	Genic_Genomic	ENSMUSG00000037253.9	novel	NA	NA	NA	NA	-255	-14566	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATACTGTCTTCCTTC	NA	False	NA	NA	False	ACTAAA	-20	NA	73705859	73711080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_73705900_73711100
ES.16837.7	chr18	+	3840	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-255	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	NA	False	NA	36	True	AATAAA	-23	NA	73705859	73725646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706176_73706328_73706848_73722641
ES.16837.8	chr18	+	3802	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-253	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	NA	False	NA	36	True	AATAAA	-23	NA	73705861	73725646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706147_73706335_73706848_73722641
ES.16837.9	chr18	+	3885	3	NNC	ENSMUSG00000037253.9	novel	3738	2	NA	NA	-224	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTATTCTCCTTGGTG	NA	False	NA	32	True	AATAAA	-19	NA	73705890	73725642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_73706085_73706157_73706848_73722641
ES.16838.1	chr18	+	2122	1	FSM	ENSMUSG00000118185.2	ENSMUST00000235991.2	274	1	-1041	-807	-1041	807	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	73799233	73801355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_73799200_73801400
ES.16839.1	chr18	+	2813	1	Intergenic	novelGene_14028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73832014	73834827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_73832000_73834800
ES.1684.1	chr1	-	170	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	156618209	156618039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156618000_156618200
ES.16840.1	chr18	+	4027	1	Antisense	novelGene_ENSMUSG00000024515.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGTGACCTTTATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	73836253	73840280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_73836300_73840300
ES.16841.1	chr18	-	7594	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	9	-4219	9	4219	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTGTGCTCACTCGTT	3	False	NA	NA	False	ATTAAA	-19	NA	73836842	73767860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.11	chr18	-	4230	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-7	259	intron_retention	FALSE	canonical	3	347	junction_10	32.7385094346093	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTTACCCTGAGAGT	NA	False	NA	60	True	AATAAA	-15	NA	73836858	73771820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73809017_73810733_73811111_73836500
ES.16841.12	chr18	-	3695	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-17	257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	158.524498197993	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTTTACCCTGAGA	NA	False	NA	58	True	AATAAA	-13	NA	73836868	73771822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808089_73808157_73808841_73809017_73810733_73811111_73836500
ES.16841.13	chr18	-	4322	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-11	255	intron_retention	FALSE	canonical	3	347	junction_10	32.109344434292	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTTTTTACCCTGA	NA	False	NA	56	True	AATAAA	-11	NA	73836862	73771824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.14	chr18	-	4329	11	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	255	intron_retention	FALSE	canonical	0	0	junction_9	128.041438604852	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGTTTTTACCCTGA	NA	False	NA	56	True	AATAAA	-11	NA	73836860	73771824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810724_73811111_73836500
ES.16841.15	chr18	-	3627	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-7	222	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	121.881665954596	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73836858	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781941_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.16	chr18	-	3512	11	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-3	222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	124.652677468236	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73836854	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795949_73808918_73809017_73810733_73811111_73836500
ES.16841.17	chr18	-	3532	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-19	222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.19625276068	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73836870	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73810805_73810897_73811111_73836500
ES.16841.19	chr18	-	3159	11	NNC	ENSMUSG00000024515.14	novel	2233	11	NA	NA	277	222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	127.889014383566	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	5498	False	NA	23	True	NA	NA	NA	73811025	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810744
ES.16841.2	chr18	-	4415	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	1161	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	125.498844616196	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTTGGAAGTAGATTC	NA	False	NA	NA	False	ATTAAA	-26	NA	73836860	73770918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.21	chr18	-	4075	2	ISM	ENSMUSG00000024515.14	ENSMUST00000131339.8	487	3	-1611	-1371	-1611	222	intron_retention	FALSE	canonical	3	378	junction_1	0	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73777245	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_73773541_73774853
ES.16841.22	chr18	-	3477	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-17	222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.19625276068	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73836868	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773145_73773290_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.23	chr18	-	3609	11	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-8	222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	163.23345245384	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATAAATAGTGTGAAT	NA	False	NA	23	True	NA	NA	NA	73836859	73771857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791845_73791970_73795728_73795960_73808841_73809017_73810733_73811111_73836500
ES.16841.24	chr18	-	2315	7	NIC	ENSMUSG00000024515.14	novel	917	8	NA	NA	3917	205	combination_of_known_junctions	FALSE	canonical	2	22	junction_3	147.551874117395	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	6	True	NA	NA	NA	73791929	73771874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782034_73782796_73782981_73790265_73790317_73791638_73791756_73791849
ES.16841.25	chr18	-	9941	1	Genic_Genomic	ENSMUSG00000024515.14	novel	NA	NA	NA	NA	1075	205	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	6	True	NA	NA	NA	73781815	73771874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_73771900_73781800
ES.16841.26	chr18	-	3449	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	1	205	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	125.498844616196	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	6	True	NA	NA	NA	73836850	73771874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.27	chr18	-	3725	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-8	205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	157.850931789035	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	6	True	NA	NA	NA	73836859	73771874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73821669_73821798_73836500
ES.16841.28	chr18	-	3556	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	45	203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	122.371538310302	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAAC	39	False	NA	4	True	NA	NA	NA	73836806	73771876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791770_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.29	chr18	-	4926	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-18	202	intron_retention	FALSE	canonical	3	347	junction_10	32.5915633254988	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	3	True	NA	NA	NA	73836869	73771877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.3	chr18	-	4576	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-33	-1159	-33	1159	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGCTTGGAAGTAGAT	NA	False	NA	NA	False	ATTAAA	-24	NA	73836884	73770920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.30	chr18	-	3863	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-467	-12	-467	12	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTTTTTAAAATGCTT	NA	False	NA	2	True	AATAAA	-31	NA	73837318	73772067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.31	chr18	-	3413	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	121.881665954596	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGATTTGGTTTTTAAA	NA	False	NA	-4	True	AATAAA	-25	NA	73836860	73772073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781941_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.33	chr18	-	3512	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	153.778588128083	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTAGATTTGGTTTTTA	NA	False	NA	-6	True	AATAAA	-23	NA	73836857	73772075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73805812_73805931_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.34	chr18	-	3691	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	156.199903080067	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTCTAGATTTGGTT	NA	False	NA	-10	True	AATAAA	-19	NA	73836860	73772079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73809464_73809763_73810733_73811111_73836500
ES.16841.35	chr18	-	3318	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.033490031867	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTCTAGATTTGGTT	NA	False	NA	-10	True	AATAAA	-19	NA	73836858	73772079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811038_73836500
ES.16841.36	chr18	-	3251	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	125.498844616196	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGAATTCTAGATTTGG	NA	False	NA	-12	True	AATAAA	-17	NA	73836859	73772081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.38	chr18	-	4711	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	347	junction_10	32.5915633254988	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGAATTCTAGATTTGG	NA	False	NA	-12	True	AATAAA	-17	NA	73836858	73772081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.39	chr18	-	3387	11	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	124.652677468236	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGAATTCTAGATTTG	NA	False	NA	-13	True	AATAAA	-16	NA	73836869	73772082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808823_73809017_73810733_73811111_73836500
ES.16841.4	chr18	-	4004	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-18	-602	-18	602	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTTCAGATCCGTT	NA	False	NA	NA	False	TATAAA	-20	NA	73836869	73771477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.40	chr18	-	3971	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	347	junction_10	32.7385094346093	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGGAATTCTAGATTT	NA	False	NA	-14	True	AATAAA	-15	NA	73836862	73772083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73809017_73810733_73811111_73836500
ES.16841.42	chr18	-	3768	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	156.199903080067	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGTGGAATTCTAGATT	NA	False	NA	-15	True	AATAAA	-14	NA	73836860	73772084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810209_73810590_73810733_73811111_73836500
ES.16841.44	chr18	-	3297	12	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	2	22	junction_3	117.248341368733	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGTGGAATTCTAGATT	NA	False	NA	-15	True	AATAAA	-14	NA	73836860	73772084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782034_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.45	chr18	-	3282	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-20	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	127.291947899307	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGTGGAATTCTAGATT	NA	False	NA	-15	True	AATAAA	-14	NA	73836871	73772084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.48	chr18	-	3425	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	158.524498197993	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAGTGGAATTCTAGATT	NA	False	NA	-15	True	AATAAA	-14	NA	73836860	73772084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808089_73808157_73808841_73809017_73810733_73811111_73836500
ES.16841.49	chr18	-	3390	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	122.847348666466	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGTGGAATTCTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	73836872	73772085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808253_73808841_73809017_73810733_73811111_73836500
ES.16841.5	chr18	-	5323	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-18	599	intron_retention	FALSE	canonical	3	347	junction_10	32.5915633254988	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTGTCTTCAGATCC	NA	False	NA	NA	False	TATAAA	-17	NA	73836869	73771480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.50	chr18	-	3138	10	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	131.977644945771	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGTGGAATTCTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	73836848	73772085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.51	chr18	-	2889	8	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	142.241674194137	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGTGGAATTCTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	73836860	73772085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.52	chr18	-	3373	12	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	122.644955558584	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGTGGAATTCTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	73836860	73772085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790300_73791635_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.55	chr18	-	3303	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.19625276068	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGTGGAATTCTAGAT	NA	False	NA	-16	True	AATAAA	-13	NA	73836869	73772085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73810805_73810897_73811111_73836500
ES.16841.57	chr18	-	3216	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-18	186	-18	-186	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAAGACTGCAGACTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	73836869	73772265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.58	chr18	-	2884	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	13	487	13	-487	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGGAGGGATTTTTC	7	False	NA	NA	False	TTTAAA	-14	NA	73836838	73772566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.59	chr18	-	2437	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-118	1065	-118	-73	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCAGGTGTGGCTCAG	NA	False	NA	0	True	ATTAAA	-19	NA	73836969	73773144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.6	chr18	-	3727	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-68	-275	-68	275	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTCTGTGAGTTTTAA	NA	False	NA	76	True	AATAAA	-31	NA	73836919	73771804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.60	chr18	-	2275	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	-68	1177	-68	26	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTATTGCATTTTGTT	NA	False	NA	-112	True	AATATA	-18	NA	73836919	73773256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.8	chr18	-	3791	13	NNC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	-21	268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	153.778588128083	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGAGTTTTCTGTGA	NA	False	NA	69	True	AATAAA	-24	NA	73836872	73771811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73805812_73805931_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ES.16841.9	chr18	-	4459	10	NIC	ENSMUSG00000024515.14	novel	2233	11	NA	NA	265	268	intron_retention	FALSE	canonical	2	22	junction_3	128.31298539985	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGAGTTTTCTGTGA	5486	False	NA	69	True	AATAAA	-24	NA	73811037	73771811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73773541_73774853_73774993_73781955_73782034_73782796_73782981_73790265_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733
ES.16842.1	chr18	-	172	1	Intergenic	novelGene_14029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAAAAATAGAATAGATC	NA	False	NA	NA	False	NA	NA	NA	73860674	73860502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_73860500_73860700
ES.16843.1	chr18	-	5211	4	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.684198393627	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTGTCCTGCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	73887516	73868108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73875407_73875873_73880237_73880403_73887198
ES.16843.2	chr18	-	5061	5	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.2704780540755	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTGTCCTGCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	73887523	73868108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73874628_73874746_73875407_73875873_73880237_73880403_73887472
ES.16843.3	chr18	-	5063	5	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.3041346956501	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCCTTGTCCTGCGGTT	NA	False	NA	NA	False	NA	NA	NA	73887543	73868110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73875407_73875873_73880237_73880403_73884790_73884892_73887472
ES.16843.4	chr18	-	4982	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	-14	3	-14	-3	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCCTTGTCCTGCGGT	NA	False	NA	NA	False	NA	NA	NA	73887564	73868111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ES.16843.5	chr18	-	5765	4	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.1656862405839	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCCTTGTCCTGCGGT	NA	False	NA	NA	False	NA	NA	NA	73887568	73868111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73874628_73875873_73880237_73880403_73887472
ES.16843.6	chr18	-	2502	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	-18	2487	-18	-2487	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGAGTTTATTATCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	73887568	73870595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ES.16843.7	chr18	-	2404	4	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	11	-2487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.3666251038423	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGGAGTTTATTATCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	73887539	73870595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73875407_73875873_73880306_73880403_73887472
ES.16843.8	chr18	-	2682	6	NNC	ENSMUSG00000036941.3	novel	4971	4	NA	NA	5	-2495	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	12.8	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGCTAGGAGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	73887545	73870603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73872372_73873490_73873581_73874628_73874746_73875407_73875873_73880233_73880403_73887472
ES.16844.1	chr18	-	134	1	Intergenic	novelGene_14030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	73897218	73897084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_73897100_73897200
ES.16845.1	chr18	+	179	1	Intergenic	novelGene_14031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTCAGTGGC	NA	False	NA	NA	False	NA	NA	NA	73897515	73897694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_73897500_73897700
ES.16846.1	chr18	+	5573	1	Antisense	novelGene_ENSMUSG00000024556.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGCAGCAAGCGCTCT	NA	False	NA	NA	False	NA	NA	NA	73917063	73922636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_73917100_73922600
ES.16846.2	chr18	+	2443	2	Antisense	novelGene_ENSMUSG00000024556.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73917657	73922616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_73918908_73921423
ES.16846.3	chr18	+	4104	3	Antisense	novelGene_ENSMUSG00000024556.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCGCAGCAAGCGCTCT	NA	False	NA	NA	False	NA	NA	NA	73917657	73922636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_73919492_73919793_73921542_73922114
ES.16847.1	chr18	-	7583	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	2	-4947	2	4947	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCTGACTTTGTTTCT	373	False	NA	NA	False	AGTAAA	-21	NA	73948507	73898026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.10	chr18	-	2391	15	NIC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	32	-139	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	147.222187352924	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAGTTACATTAT	403	False	NA	-2	True	AATAAA	-18	NA	73948477	73903112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.12	chr18	-	2941	17	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-332	-139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	183.924534456391	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAGTTACATTAT	28	False	NA	-2	True	AATAAA	-18	NA	73948852	73903112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73945106_73945206_73948374
ES.16847.13	chr18	-	1978	12	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	19049	-143	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	162.357782649237	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCTTCAGTTACA	NA	False	NA	-6	True	AATAAA	-14	NA	73929460	73903116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903900_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384
ES.16847.14	chr18	-	2488	16	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-1	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	144.239523016405	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCTTCAGTTACA	370	False	NA	-6	True	AATAAA	-14	NA	73948510	73903116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928006_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.15	chr18	-	2294	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-11	355	0	-355	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTGCTCTGTTCTTGT	360	False	NA	NA	False	AAGAAA	-15	NA	73948520	73903328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.16	chr18	-	2083	17	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	1	-664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	183.924534456391	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGTCATCTGTGGTTTA	361	False	NA	-1	True	AAAAAG	-18	NA	73948519	73903637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73945106_73945206_73948374
ES.16847.17	chr18	-	2284	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-310	664	-299	-664	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGTCATCTGTGGTTTA	61	False	NA	-1	True	AAAAAG	-18	NA	73948819	73903637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.19	chr18	-	1967	16	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-32	-668	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	143.880258857457	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGGTGTCATCTGTGG	328	False	NA	-5	True	AAAAAG	-14	NA	73948552	73903641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903834_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.2	chr18	-	4081	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-10	-1433	1	1433	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAATGTTTATTATC	361	False	NA	NA	False	TATAAA	-14	NA	73948519	73901540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.20	chr18	-	2180	2	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	42584	-668	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGGTGTCATCTGTGG	NA	False	NA	-5	True	AAAAAG	-14	NA	73905925	73903641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73905722_73905825
ES.16847.22	chr18	-	1869	15	NIC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	2	-668	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	148.280983271625	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGGTGTCATCTGTGG	373	False	NA	-5	True	AAAAAG	-14	NA	73948507	73903641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73903880_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.23	chr18	-	2086	17	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-17	-668	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	183.762403918076	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGGTGTCATCTGTGG	343	False	NA	-5	True	AAAAAG	-14	NA	73948537	73903641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73945106_73945195_73948374
ES.16847.24	chr18	-	1227	11	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-2	-670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.467294085054	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTACGGTGTCATCTGT	369	False	NA	-7	True	AAAAAG	-12	NA	73948511	73903643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903724_73924210_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.25	chr18	-	3724	14	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-21	3406	-10	-3406	5prime_fragment	FALSE	canonical	3	442	junction_6	50.9319072055782	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTCCAGTGCT	350	False	NA	NA	False	AATAAA	-18	NA	73948530	73906379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.26	chr18	-	1804	15	NNC	ENSMUSG00000024556.5	novel	715	4	NA	NA	2	-3408	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	146.581035608294	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTTTCTCCAGTG	373	False	NA	NA	False	AATAAA	-16	NA	73948507	73906381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73906555_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.27	chr18	-	4081	1	FSM	ENSMUSG00000024556.5	ENSMUST00000235595.2	3366	1	-335	-380	-331	380	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTGGCTTTACAGTTG	29	False	NA	NA	False	NA	NA	NA	73948851	73944770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73944800_73948900
ES.16847.3	chr18	-	3973	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-58	-1277	-47	1277	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTTTTGCTCA	313	False	NA	NA	False	NA	NA	NA	73948567	73901696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.4	chr18	-	3890	16	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	2	1260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	144.239523016405	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATGTGTTGCTGGTTTT	373	False	NA	NA	False	NA	NA	NA	73948507	73901713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928008_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.5	chr18	-	3772	15	NIC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-10	1189	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	147.222187352924	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTTATTTTTTTTCAT	350	False	NA	NA	False	AATAAA	-18	NA	73948530	73901784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.6	chr18	-	3866	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-57	-1171	-46	1171	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAACAAAAATGAAGAGAA	314	False	NA	NA	False	CATAAA	-4	NA	73948566	73901802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.7	chr18	-	4275	15	NIC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-324	-137	intron_retention	FALSE	canonical	3	442	junction_8	48.1770226373951	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCAGTTACATTATCT	36	False	NA	0	True	AATAAA	-20	NA	73948844	73903110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.8	chr18	-	2842	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-343	139	-332	-139	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAGTTACATTAT	28	False	NA	-2	True	AATAAA	-18	NA	73948852	73903112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16847.9	chr18	-	2532	16	NNC	ENSMUSG00000024556.5	novel	2638	16	NA	NA	-10	-139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	143.394033658618	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAGTTACATTAT	350	False	NA	-2	True	AATAAA	-18	NA	73948530	73903112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924790_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ES.16848.1	chr18	+	3815	1	FSM	ENSMUSG00000053861.2	ENSMUST00000066583.2	483	1	-47	-3285	-47	3285	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCAAATCCAAAGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	74198125	74201940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74198100_74201900
ES.16849.1	chr18	-	4784	7	NNC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.4204541336391	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9814	False	NA	NA	False	AATAAA	-19	NA	74198004	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74193461_74193648_74197910
ES.16849.10	chr18	-	3224	5	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-25	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.5267652463311	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATAAATTCGTCAGGAA	9793	False	NA	NA	False	AATAAA	-10	NA	74198025	74061565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74197910
ES.16849.11	chr18	-	3398	1	Intergenic	novelGene_14032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTGAATCTTACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	74096478	74093080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74093100_74096500
ES.16849.12	chr18	-	2209	2	NNC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-28	-73831	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTGTTTTTTGGCCAT	9790	False	NA	NA	False	NA	NA	NA	74198028	74178071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74180163_74197910
ES.16849.13	chr18	-	752	3	NNC	ENSMUSG00000024558.13	novel	426	2	NA	NA	10	-87548	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGAGTTGGTTTTTTTA	9398	False	NA	NA	False	AATAAA	-19	NA	74198420	74191788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74192051_74193461_74193643_74198111
ES.16849.2	chr18	-	4649	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	-55	0	-55	0	multi-exon	FALSE	canonical	3	19	junction_5	8.45221864364617	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9763	False	NA	NA	False	AATAAA	-19	NA	74198055	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
ES.16849.3	chr18	-	4565	5	NNC	ENSMUSG00000024558.13	novel	4828	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.7784605063185	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9397	False	NA	NA	False	AATAAA	-19	NA	74198421	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74064166_74066967_74067170_74068076_74068239_74102961_74104348_74198215
ES.16849.4	chr18	-	4836	6	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	6.68131723539603	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9375	False	NA	NA	False	AATAAA	-19	NA	74198443	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74198111
ES.16849.5	chr18	-	5126	3	ISM	ENSMUSG00000024558.13	ENSMUST00000162863.8	4828	5	127072	0	127072	0	3prime_fragment	FALSE	canonical	3	38	junction_1	1.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	NA	False	NA	NA	False	AATAAA	-19	NA	74070391	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_74064166_74066967_74067170_74068076
ES.16849.6	chr18	-	4325	4	NIC	ENSMUSG00000024558.13	novel	4594	6	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.5134350376268	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9780	False	NA	NA	False	AATAAA	-19	NA	74198038	74061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74064166_74066967_74067170_74102961_74104348_74197910
ES.16849.8	chr18	-	3279	4	NIC	ENSMUSG00000024558.13	novel	4828	5	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.6607133363712	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCGTCAGGAATTGTCA	9398	False	NA	NA	False	AATAAA	-16	NA	74198420	74061559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74064166_74066967_74067170_74068076_74068239_74198111
ES.1685.1	chr1	+	212	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCTATTTTGTGGAAT	NA	False	NA	NA	False	NA	NA	NA	156706666	156706878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156706700_156706900
ES.16850.1	chr18	-	180	1	Intergenic	novelGene_14033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGTAGCAACAAAAT	8928	False	NA	NA	False	NA	NA	NA	74207014	74206834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74206800_74207000
ES.16851.1	chr18	+	168	1	Intergenic	novelGene_14034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	74299542	74299710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_74299500_74299700
ES.16852.1	chr18	+	4062	1	Antisense	novelGene_ENSMUSG00000036223.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGATGAAACACAAGT	NA	False	NA	NA	False	NA	NA	NA	74335154	74339216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_74335200_74339200
ES.16853.1	chr18	-	4732	8	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-6	2247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.250420747268	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTGATTCTCTCAT	6791	False	NA	NA	False	NA	NA	NA	74340824	74326122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74327639_74327693_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.10	chr18	-	3704	6	NIC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-7	-280	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6719	False	NA	-1	True	AGTAAA	-34	NA	74340896	74329829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.11	chr18	-	3695	6	NIC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	-5	-280	intron_retention	FALSE	canonical	3	11	junction_5	189.141217083956	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6792	False	NA	-1	True	AGTAAA	-34	NA	74340823	74329829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340600
ES.16853.12	chr18	-	1128	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	42	1460	10	-280	multi-exon	FALSE	canonical	3	11	junction_6	177.375699826354	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTAGGAACGTGGG	6807	False	NA	-1	True	AGTAAA	-34	NA	74340808	74329829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ES.16853.13	chr18	-	1144	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	-1	1462	-1	-282	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCCTTTAGGAACGTG	6725	False	NA	-3	True	AGTAAA	-32	NA	74340890	74329831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.14	chr18	-	3680	6	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	1	-283	intron_retention	FALSE	canonical	3	85	junction_4	159.779848541673	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCCTTTAGGAACGT	6766	False	NA	-4	True	AGTAAA	-31	NA	74340849	74329832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339833_74339956_74340664
ES.16853.15	chr18	-	3538	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-15	-283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.470889631699	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCCTTTAGGAACGT	6782	False	NA	-4	True	AGTAAA	-31	NA	74340833	74329832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74335561_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.16	chr18	-	1128	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-3	-287	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGTACTGCCTTTAGGA	6762	False	NA	-8	True	AGTAAA	-27	NA	74340853	74329836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
ES.16853.17	chr18	-	3835	6	NNC	ENSMUSG00000036223.17	novel	1256	6	NA	NA	3	-298	intron_retention	FALSE	canonical	3	33	junction_3	177.798087728749	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6729	False	NA	-19	True	AGTAAA	-16	NA	74340886	74329847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74335918_74337334_74337460_74339859_74339956_74340664
ES.16853.2	chr18	-	5287	6	NNC	ENSMUSG00000036223.17	novel	1256	6	NA	NA	-5	5	intron_retention	FALSE	canonical	3	33	junction_3	177.798087728749	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGGTGGCTTCCTGCCT	6760	False	NA	-3	True	NA	NA	NA	74340855	74328364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74335918_74337334_74337460_74339859_74339956_74340664
ES.16853.3	chr18	-	2569	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAAGGCATGGTGGCT	6785	False	NA	-11	True	NA	NA	NA	74340830	74328372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
ES.16853.4	chr18	-	5051	6	NIC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	32	-3	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAAGGCATGGTGGCT	6829	False	NA	-11	True	NA	NA	NA	74340786	74328372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.5	chr18	-	2398	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	102	105	31	-105	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCTGGACCTAAACTT	6828	False	NA	NA	False	NA	NA	NA	74340787	74328474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.6	chr18	-	1704	7	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	5	329	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTACGTCTGGTTCCTT	6802	False	NA	NA	False	NA	NA	NA	74340813	74329220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
ES.16853.7	chr18	-	4265	6	NNC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-4	329	intron_retention	FALSE	canonical	3	85	junction_4	159.779848541673	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTACGTCTGGTTCCTT	6793	False	NA	NA	False	NA	NA	NA	74340822	74329220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339833_74339956_74340664
ES.16853.8	chr18	-	3959	6	NIC	ENSMUSG00000036223.17	novel	2605	7	NA	NA	-7	46	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCCTTCCTTTCAGC	6790	False	NA	NA	False	CATAAA	-11	NA	74340825	74329503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
ES.16853.9	chr18	-	1373	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	42	1190	3	-10	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAATGCAGTAACAGGA	6768	False	NA	NA	False	GATAAA	-18	NA	74340847	74329559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ES.16854.1	chr18	+	2949	14	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-56	-2	intron_retention	TRUE	canonical	3	29	junction_7	63.917198655946	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349138	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352456_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.10	chr18	+	3026	13	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	85	-2	intron_retention	FALSE	canonical	3	205	junction_5	26.3474382056397	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349286	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74354052_74354129
ES.16854.11	chr18	+	2636	14	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	85	-2	intron_retention	FALSE	canonical	3	205	junction_5	28.2315028200641	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349286	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.12	chr18	+	2971	12	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	85	0	intron_retention	FALSE	canonical	3	215	junction_3	25.416855213138	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349286	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.13	chr18	+	2504	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	89	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.2378127944965	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349290	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352933_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.14	chr18	+	3111	12	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	89	-2	intron_retention	FALSE	canonical	3	205	junction_4	27.0683249366494	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349290	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74354052_74354129
ES.16854.15	chr18	+	3096	12	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	89	-2	intron_retention	FALSE	canonical	3	205	junction_6	28.0518999518587	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349290	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74353303_74353427_74353478_74353579_74354052_74354129
ES.16854.17	chr18	+	2945	13	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	89	0	intron_retention	FALSE	canonical	3	205	junction_6	27.6586333718787	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349290	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.19	chr18	+	2840	13	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	91	-2	intron_retention	FALSE	canonical	0	0	junction_11	73.8436787334494	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349292	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353630_74353898_74354052_74354129
ES.16854.2	chr18	+	2659	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349172	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.20	chr18	+	3688	8	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	91	0	intron_retention	FALSE	canonical	3	215	junction_3	26.6672618981188	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349292	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74352310_74352453_74353117_74353191_74353303_74353427_74353478_74353579
ES.16854.21	chr18	+	3290	11	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	91	0	intron_retention	FALSE	canonical	3	215	junction_4	25.121504732002	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349292	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74352049_74352201_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.22	chr18	+	4157	4	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	91	-2	intron_retention	FALSE	canonical	3	215	junction_2	16.779617264871	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349292	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74351349_74351699_74354052_74354129
ES.16854.24	chr18	+	2873	13	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	92	-2	intron_retention	FALSE	canonical	3	215	junction_4	24.8533196977788	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349293	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.25	chr18	+	2290	14	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	92	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	70.5283526017024	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349293	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.26	chr18	+	4253	5	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	92	-3	intron_retention	FALSE	canonical	3	233	junction_2	12.5772612281053	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGGCTCTCTCTCAAT	NA	False	NA	11	True	AATAAA	-14	NA	74349293	74354561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74352049_74352201_74353117_74353191
ES.16854.27	chr18	+	3597	9	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	92	-2	intron_retention	FALSE	canonical	3	205	junction_4	29.4636958815421	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349293	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74353303_74353427_74353478_74353579_74354052_74354129
ES.16854.28	chr18	+	2505	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	92	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_13	79.7784240178728	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349293	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353644_74353898_74354052_74354129
ES.16854.29	chr18	+	2525	14	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	93	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.8018319557059	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349294	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351775_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.3	chr18	+	3344	11	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	205	junction_6	29.0387671914632	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349191	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74353117_74353191_74353303_74353427_74353478_74353579
ES.16854.30	chr18	+	2531	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	93	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.0485155661167	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349294	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350228_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352456_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.31	chr18	+	2494	14	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	93	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.718062173745	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349294	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350241_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.32	chr18	+	3978	10	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	-2	intron_retention	FALSE	canonical	3	205	junction_3	29.6227306783069	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349299	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.34	chr18	+	3225	11	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	-2	intron_retention	FALSE	canonical	3	205	junction_4	28.4852593458441	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349299	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.35	chr18	+	4204	5	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	1	intron_retention	FALSE	canonical	3	233	junction_2	18.2671152621316	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTCTCAATAGTCTCC	NA	False	NA	18	True	AATAAA	-21	NA	74349299	74354568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74352049_74352201_74353303_74353427
ES.16854.36	chr18	+	2882	13	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	0	intron_retention	FALSE	canonical	3	205	junction_4	27.4907812831057	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349299	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.37	chr18	+	3186	11	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	101	-3	intron_retention	FALSE	canonical	3	210	junction_3	20.9525654753779	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGGCTCTCTCTCAAT	NA	False	NA	11	True	AATAAA	-14	NA	74349302	74354561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74352049_74352201_74352310_74352453_74353117_74353191_74353303_74353427_74354052_74354129
ES.16854.39	chr18	+	3204	12	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	101	0	intron_retention	FALSE	canonical	3	205	junction_5	27.0738201134821	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349302	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.4	chr18	+	5361	1	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349201	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349200_74354600
ES.16854.40	chr18	+	3872	7	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	102	-2	intron_retention	FALSE	canonical	3	233	junction_2	21.2655172103154	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349303	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74352049_74352201_74352639_74352908_74353117_74353191_74353478_74353579
ES.16854.41	chr18	+	2550	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	102	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	90.0376338549836	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349303	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351818_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353848_74354052_74354129
ES.16854.43	chr18	+	2279	14	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-705	-2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	62.7128328835815	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74350236	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.44	chr18	+	2742	10	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	-386	-9	intron_retention	FALSE	canonical	3	217	junction_8	24.989380460557	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCAACAAGGCTCTCT	NA	False	NA	5	True	AATAAA	-8	NA	74350555	74354555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74351068_74351156_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.45	chr18	+	2051	10	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	49	-2	intron_retention	FALSE	canonical	3	205	junction_2	31.3171747145039	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74350990	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.5	chr18	+	2623	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	-3	0	0	multi-exon	FALSE	canonical	3	205	junction_6	27.3663729300567	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTCTCAATAGTCTC	NA	False	NA	17	True	AATAAA	-20	NA	74349201	74354567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.6	chr18	+	2557	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.5633492489271	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAAGGCTCTCTCTCAA	NA	False	NA	10	True	AATAAA	-13	NA	74349212	74354560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351171_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353644_74353898_74354052_74354129
ES.16854.7	chr18	+	4330	4	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	72	1	intron_retention	FALSE	canonical	3	249	junction_1	13.1402688962847	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTCTCTCAATAGTC	NA	False	NA	15	True	AATAAA	-18	NA	74349273	74354565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74352049_74352201_74353303_74353427
ES.16854.8	chr18	+	2612	14	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	81	-2	intron_retention	FALSE	canonical	3	205	junction_6	28.3970162612972	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTCTCTCTCAATA	NA	False	NA	12	True	AATAAA	-15	NA	74349282	74354562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ES.16854.9	chr18	+	3437	10	NIC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	82	0	intron_retention	FALSE	canonical	3	205	junction_4	26.9846778655253	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349283	74354564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74349554_74350237_74350357_74350459_74351349_74351699_74351727_74351802_74352049_74352201_74353117_74353191_74353478_74353579_74353677_74353898_74354052_74354129
ES.16855.1	chr18	+	2991	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-122	-31	-6	-16	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	74401239	74415787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.10	chr18	+	5112	14	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	19	-19	intron_retention	FALSE	canonical	3	24	junction_11	21.0403950735739	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401264	74414286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74410501_74410587_74410650_74411749
ES.16855.11	chr18	+	4242	12	NNC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_2	28.2971248137911	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401264	74415803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406287_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74410501_74410587_74410650_74414949
ES.16855.12	chr18	+	5036	12	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	23	-19	intron_retention	FALSE	canonical	3	25	junction_8	20.4062055056911	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401268	74414286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74408330_74408413_74408489_74409477_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.13	chr18	+	7110	14	ISM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	23	0	23	0	intron_retention	FALSE	canonical	3	25	junction_10	17.696654984294	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401268	74415803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587
ES.16855.14	chr18	+	6299	12	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	23	-11	intron_retention	FALSE	canonical	3	24	junction_10	21.8484638338906	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTCTATTTTTAT	NA	False	NA	NA	False	TTTAAA	-6	NA	74401268	74414294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74410501_74410587
ES.16855.16	chr18	+	2452	14	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	25.8898440255757	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401270	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.17	chr18	+	2910	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.2719636256724	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401271	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406711_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.18	chr18	+	5757	12	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	28	-19	intron_retention	FALSE	canonical	3	25	junction_9	18.9880345098026	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401273	74414286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407845_74408218_74408330_74408413_74408489_74409477_74410011_74410371_74410501_74410587
ES.16855.19	chr18	+	5208	13	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	2	intron_retention	FALSE	canonical	3	12	junction_10	26.0314980146915	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401273	74414307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408977_74409143_74409477_74410650_74411749
ES.16855.2	chr18	+	4707	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-6	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.4868940337586	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTAGTGTTTCTTTGGG	NA	False	NA	NA	False	TTTAAA	-23	NA	74401239	74414311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406287_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.20	chr18	+	4592	14	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	28	-2	intron_retention	FALSE	canonical	3	25	junction_10	18.9477637593276	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTTTATGTTAGTGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	74401273	74414303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410650_74411749
ES.16855.21	chr18	+	5755	15	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_14	29.863293966517	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTTTATGTTAGTGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	74401273	74414303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408977_74409143_74409477_74409787_74409872_74410011_74410371_74410486_74410587
ES.16855.22	chr18	+	2993	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.7488738510232	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401273	74415803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406259_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.23	chr18	+	4683	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	28	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	26.1916017074176	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTCTATTTTTAT	NA	False	NA	NA	False	TTTAAA	-6	NA	74401273	74414294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410669_74411749
ES.16855.24	chr18	+	2840	14	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	31	-1	intron_retention	FALSE	canonical	3	25	junction_10	21.3771431328115	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401276	74415755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.25	chr18	+	2670	15	NNC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	31	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.6630601698218	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	74401276	74415787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409671_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.26	chr18	+	8144	12	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	44	-20	intron_retention	FALSE	canonical	3	61	junction_9	10.9219621038688	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401289	74415783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74410011_74410371_74410501_74410587
ES.16855.27	chr18	+	7236	15	ISM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-71	-27	45	-20	intron_retention	FALSE	canonical	3	24	junction_11	19.5223576695949	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401290	74415783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587
ES.16855.28	chr18	+	4741	15	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	49	1	intron_retention	FALSE	canonical	3	24	junction_11	20.2843309387481	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGTTAGTGTTTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	74401294	74414306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.29	chr18	+	2846	16	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	54	-1803	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	19.7033556081755	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGATTCTTTATGTCTT	NA	False	NA	NA	False	NA	NA	NA	74401299	74412502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.3	chr18	+	2964	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.1284920281049	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401239	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406273_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407717_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.30	chr18	+	4472	15	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-18	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.871291865681	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401342	74414286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.31	chr18	+	7589	7	ISM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-17	1462	-16	-11	intron_retention	FALSE	canonical	3	75	junction_2	7.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTCTATTTTTAT	NA	False	NA	NA	False	TTTAAA	-6	NA	74401344	74414294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485
ES.16855.32	chr18	+	4168	14	NNC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	-12	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.227716535421	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTTCTTGTTCTATTT	NA	False	NA	NA	False	TTTAAA	-2	NA	74401348	74414290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409812_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.33	chr18	+	8619	9	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-11	-16	intron_retention	FALSE	canonical	3	61	junction_8	11.1327220391062	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	74401349	74415787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407845_74408218_74408330_74408413
ES.16855.34	chr18	+	5892	13	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	-11	0	intron_retention	FALSE	canonical	3	25	junction_10	18.4044076846342	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATGTTAGTGTTTC	NA	False	NA	NA	False	TTTAAA	-17	NA	74401349	74414305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410501_74410587
ES.16855.35	chr18	+	4102	14	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	-10	-19	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	24.0017257762163	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATTTTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	74401350	74414286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.36	chr18	+	5698	15	ISM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	-10	1450	-9	1	5prime_fragment	FALSE	canonical	3	24	junction_11	19.5223576695949	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGTTAGTGTTTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	74401351	74414306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587
ES.16855.37	chr18	+	4476	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-9	-125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	26.3779369086279	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCCTTTTTTGAGTTG	NA	False	NA	NA	False	AATATA	-23	NA	74401351	74414180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409868_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.38	chr18	+	5965	12	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	2	1	intron_retention	FALSE	canonical	3	25	junction_10	19.194093444091	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGTTAGTGTTTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	74401363	74414306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74410501_74410587
ES.16855.4	chr18	+	4708	16	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	19.7033556081755	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401242	74414307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.40	chr18	+	2288	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	13	537	13	-28	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCAGTGACTGGCCT	NA	False	NA	NA	False	AAGAAA	-39	NA	74401374	74415219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.41	chr18	+	7599	13	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	13	-20	intron_retention	FALSE	canonical	3	24	junction_11	21.0052903389175	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401374	74415783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74410501_74410587
ES.16855.42	chr18	+	3732	13	NIC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	13	0	intron_retention	FALSE	canonical	3	30	junction_12	17.2697149818854	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401374	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.43	chr18	+	2796	15	NNC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	25.2578539007864	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401377	74415803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408584_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.44	chr18	+	4483	14	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	23	1	intron_retention	FALSE	canonical	3	25	junction_10	18.8971053792896	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGTTAGTGTTTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	74401384	74414306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.45	chr18	+	1793	8	ISM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	6468	16	1125	-16	3prime_fragment	FALSE	canonical	3	25	junction_3	21.27372625027	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	74407713	74415787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.46	chr18	+	870	2	ISM	ENSMUSG00000024561.12	ENSMUST00000237568.2	796	4	882	-509	882	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74410586	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74410650_74414949
ES.16855.5	chr18	+	2840	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	-3	-4	-3	4	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTGCCATGTGGT	NA	False	NA	NA	False	NA	NA	NA	74401242	74415807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16855.6	chr18	+	4537	15	NIC	ENSMUSG00000024561.12	novel	2833	15	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	18.2702222320409	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTAGTGTTTCTTTGGG	NA	False	NA	NA	False	TTTAAA	-23	NA	74401249	74414311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74411749
ES.16855.7	chr18	+	5624	14	ISM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	13	1496	13	2	5prime_fragment	FALSE	canonical	3	25	junction_10	17.696654984294	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTAGTGTTTCTT	NA	False	NA	NA	False	TTTAAA	-19	NA	74401258	74414307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587
ES.16855.8	chr18	+	2933	16	NNC	ENSMUSG00000024561.12	novel	2838	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.7488738510232	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401258	74415756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74401505_74402473_74402610_74406287_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ES.16856.1	chr18	+	3639	13	FSM	ENSMUSG00000025885.19	ENSMUST00000120161.8	3400	13	-235	-4	-167	4	multi-exon	FALSE	canonical	0	0	junction_1	0.640095478989051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGGAGAAATCTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	74575440	74792135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74575879_74702837_74702949_74710525_74710698_74713460_74713606_74749993_74750151_74758632_74758777_74760241_74760324_74767531_74767640_74771112_74771223_74776997_74777264_74786430_74786513_74787000_74787142_74790452
ES.16856.2	chr18	+	6221	39	FSM	ENSMUSG00000025885.19	ENSMUST00000074157.13	6745	39	-164	688	-164	0	multi-exon	TRUE	canonical	0	0	junction_1	1.36943282434291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTGTGGGTCTTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	74575443	74903876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74575879_74702837_74702949_74710525_74710698_74713460_74713606_74749993_74750151_74758632_74758777_74760241_74760324_74767531_74767640_74771112_74771223_74776997_74777264_74786430_74786513_74787000_74787142_74794677_74794801_74795733_74795818_74809671_74809828_74810491_74810590_74815619_74815707_74828442_74828555_74831256_74831469_74833642_74833800_74834515_74834756_74840934_74841169_74846618_74846704_74847896_74848031_74849029_74849150_74850040_74850179_74853907_74853974_74855403_74855644_74856827_74856929_74864715_74864915_74866981_74867076_74869216_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646_74895728_74903367
ES.16856.3	chr18	+	6888	39	FSM	ENSMUSG00000025885.19	ENSMUST00000074157.13	6745	39	-149	6	-149	-6	multi-exon	FALSE	canonical	0	0	junction_1	1.36943282434291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATAACAGGCCGATG	NA	False	NA	NA	False	AATAAA	-22	NA	74575458	74904558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74575879_74702837_74702949_74710525_74710698_74713460_74713606_74749993_74750151_74758632_74758777_74760241_74760324_74767531_74767640_74771112_74771223_74776997_74777264_74786430_74786513_74787000_74787142_74794677_74794801_74795733_74795818_74809671_74809828_74810491_74810590_74815619_74815707_74828442_74828555_74831256_74831469_74833642_74833800_74834515_74834756_74840934_74841169_74846618_74846704_74847896_74848031_74849029_74849150_74850040_74850179_74853907_74853974_74855403_74855644_74856827_74856929_74864715_74864915_74866981_74867076_74869216_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646_74895728_74903367
ES.16857.1	chr18	-	174	1	Intergenic	novelGene_14035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTACCATGAA	NA	False	NA	NA	False	NA	NA	NA	74835471	74835297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74835300_74835500
ES.16858.1	chr18	-	5391	5	Antisense	novelGene_ENSMUSG00000025885.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTAGGGCAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	74857714	74840823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_74841167_74846616_74849148_74850038_74850175_74853903_74853972_74855401
ES.16859.1	chr18	-	177	1	Intergenic	novelGene_14036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTGTACAAAG	NA	False	NA	NA	False	NA	NA	NA	74878391	74878214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74878200_74878400
ES.1686.1	chr1	+	189	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156749956	156750145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156750000_156750100
ES.16860.1	chr18	-	265	2	Intergenic	novelGene_14037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTTACTTCACCCTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	74911864	74910960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74911203_74911841
ES.16860.2	chr18	-	438	2	Genic_Genomic	ENSMUSG00000089235.3	novel	140	1	NA	NA	-88	663	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGCACGTTTACTT	NA	False	NA	NA	False	ATTAAA	-11	NA	74911859	74910968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_74911203_74911655
ES.16860.3	chr18	-	884	1	FSM	ENSMUSG00000089235.3	ENSMUST00000158610.3	140	1	-81	-663	-81	663	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGCACGTTTACTT	NA	False	NA	NA	False	ATTAAA	-11	NA	74911852	74910968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_74911000_74911900
ES.16861.1	chr18	+	1779	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	-260	-3	-260	3	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTTGTTGGTTTT	NA	False	NA	16	True	AATAAA	-20	NA	74912007	74939282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ES.16861.2	chr18	+	2311	9	NIC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	-239	-1	intron_retention	FALSE	canonical	3	191	junction_7	16.7779617355625	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACCTTTTCTTGTTGG	NA	False	NA	12	True	AATAAA	-16	NA	74912028	74939278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74932246_74934367_74934439_74937071_74937227_74938925
ES.16861.3	chr18	+	1816	11	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	-216	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.1498177227525	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACCTTTTCTTGTTGG	NA	False	NA	12	True	AATAAA	-16	NA	74912051	74939278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938389_74938475_74938925
ES.16861.5	chr18	+	3852	9	NNC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	-130	0	intron_retention	TRUE	non_canonical	0	0	junction_8	75.3391291096466	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912137	74939279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74932246_74934367_74934439_74937071_74938588_74938637
ES.16862.1	chr18	-	4164	2	Antisense	novelGene_ENSMUSG00000036880.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTCTTAAATACCAGAAA	NA	False	NA	NA	False	NA	NA	NA	74918324	74914086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_74915388_74915461
ES.16863.1	chr18	-	213	1	Intergenic	novelGene_14038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTTGTGGCACACACC	NA	False	NA	NA	False	NA	NA	NA	74947059	74946846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_74946800_74947100
ES.16864.1	chr18	-	3836	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	-49	0	-49	0	multi-exon	TRUE	canonical	1	2	junction_4	1.89215404065849	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGTCCTGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	75094383	75072392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
ES.16865.1	chr18	+	153	1	Intergenic	novelGene_14039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAATAAATAAATA	2007	False	NA	NA	False	NA	NA	NA	75108201	75108354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75108200_75108400
ES.16866.1	chr18	+	176	1	Intergenic	novelGene_14040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAGAAACCA	2628	False	NA	NA	False	NA	NA	NA	75117257	75117433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75117300_75117400
ES.16867.1	chr18	+	176	1	Intergenic	novelGene_14041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	75130951	75131127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75131000_75131100
ES.16868.1	chr18	-	1045	1	Intergenic	novelGene_14042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	75133499	75132454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75132500_75133500
ES.16869.1	chr18	+	2028	3	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	-22	-19	intron_retention	FALSE	canonical	3	8261	junction_2	1140.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACCACGTGACCATGT	NA	False	NA	1	True	ATTAAA	-17	NA	75133525	75136432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75135194_75135731_75135924_75136264
ES.16869.10	chr18	+	1791	4	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	19	-109	intron_retention	FALSE	canonical	3	8261	junction_3	1277.91609879348	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133566	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134315_75134420_75135194_75135731_75135924_75136264
ES.16869.11	chr18	+	2409	2	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-109	intron_retention	FALSE	canonical	3	8261	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133592	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75135924_75136264
ES.16869.12	chr18	+	1117	5	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-110	intron_retention	FALSE	canonical	3	6761	junction_1	1793.50557568132	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTCTTCTGGTGGTCT	NA	False	NA	29	True	AATAAA	-29	NA	75133592	75136341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75133615_75134261_75134315_75134420_75135194_75135731_75135924_75136264
ES.16869.13	chr18	+	1542	5	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	45	-109	intron_retention	FALSE	canonical	3	8261	junction_4	1419.71553048489	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133592	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134315_75134420_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.15	chr18	+	1258	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	59	-104	intron_retention	FALSE	canonical	3	8261	junction_5	1519.49465283692	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTGGTCTTTAATG	NA	False	NA	35	True	AATAAA	-35	NA	75133606	75136347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.16	chr18	+	1125	6	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	60	-109	intron_retention	FALSE	canonical	3	266	junction_1	4394.69323616564	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133607	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75133912_75134261_75134315_75134420_75134462_75134736_75135194_75135731_75135924_75136264
ES.16869.17	chr18	+	2006	4	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	65	-111	intron_retention	FALSE	canonical	3	8261	junction_3	1820.80366871335	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGGTCTTCTGGTGGTC	NA	False	NA	28	True	AATAAA	-28	NA	75133612	75136340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134315_75134420_75134462_75134736_75135924_75136264
ES.16869.18	chr18	+	886	7	NNC	ENSMUSG00000062328.9	novel	1326	9	NA	NA	76	-109	at_least_one_novel_splicesite	FALSE	canonical	3	266	junction_1	4216.73927803094	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133623	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75133912_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.2	chr18	+	797	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	-22	0	-22	0	multi-exon	FALSE	canonical	3	6761	junction_1	2088.63605148325	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGACTGTCTAGTAGC	NA	False	NA	21	True	ATTAAA	-37	NA	75133525	75136452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.3	chr18	+	1692	4	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	-110	intron_retention	FALSE	canonical	3	8261	junction_3	1566.62957402898	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTCTTCTGGTGGTCT	NA	False	NA	29	True	AATAAA	-29	NA	75133547	75136341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.5	chr18	+	646	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	5	-109	at_least_one_novel_splicesite	FALSE	canonical	3	685	junction_4	3932.32699343955	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133552	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134858_75135094_75135194_75135731_75135924_75136264
ES.16869.6	chr18	+	2342	3	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	6	-109	intron_retention	FALSE	canonical	3	8261	junction_2	1498.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133553	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75134315_75134420_75135924_75136264
ES.16869.7	chr18	+	616	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	8	-109	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	4174.34437486895	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133555	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75133615_75134261_75134315_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ES.16869.8	chr18	+	658	7	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	9	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4396.03648819656	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133556	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136262
ES.16869.9	chr18	+	929	6	NIC	ENSMUSG00000062328.9	novel	775	7	NA	NA	11	-109	intron_retention	FALSE	canonical	3	6761	junction_1	1972.2719285129	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTCTTCTGGTGGTCTT	NA	False	NA	30	True	AATAAA	-30	NA	75133558	75136342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75133615_75134261_75134315_75134420_75134872_75135094_75135194_75135731_75135924_75136264
ES.1687.1	chr1	+	2483	2	Antisense	novelGene_ENSMUSG00000026594.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAAGTTGCAATCAAAT	NA	False	NA	NA	False	NA	NA	NA	156762878	156765433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_156763478_156763549
ES.16870.1	chr18	+	887	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	-22	-341	-21	1	multi-exon	FALSE	canonical	3	91	junction_1	354	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138917	75143005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75138972_75141721_75141898_75142348
ES.16870.2	chr18	+	1098	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	-45	213	-13	6	multi-exon	FALSE	canonical	3	388	junction_1	205.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCTTTTCATAC	NA	False	NA	32	True	ATTAAA	-23	NA	75138925	75143010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75139186_75141721_75141898_75142348
ES.16870.3	chr18	+	994	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	-11	-4	-11	4	multi-exon	FALSE	canonical	3	169	junction_1	315	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTTTGTCTTTTCAT	NA	False	NA	30	True	ATTAAA	-21	NA	75138927	75143008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75139086_75141721_75141898_75142348
ES.16870.4	chr18	+	4070	1	Genic_Genomic	ENSMUSG00000036299.6	novel	NA	NA	NA	NA	-3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138935	75143005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_75138900_75143000
ES.16870.5	chr18	+	3610	2	FSM	ENSMUSG00000036299.6	ENSMUST00000235420.2	838	2	-2333	-439	4	0	multi-exon	FALSE	canonical	3	799	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138943	75143004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75141898_75142348
ES.16870.6	chr18	+	3351	3	NNC	ENSMUSG00000036299.6	novel	1266	3	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	399	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	False	NA	27	True	ATTAAA	-18	NA	75138948	75143005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75141467_75141721_75141898_75142348
ES.16870.7	chr18	+	3747	1	NIC	ENSMUSG00000036299.6	novel	979	3	NA	NA	12	34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGGCCCTTCGAGTT	NA	False	NA	NA	False	AATAGA	-30	NA	75138951	75142698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75139000_75142700
ES.16871.1	chr18	-	307	1	Antisense	novelGene_ENSMUSG00000036299.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	75141622	75141315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75141300_75141600
ES.16871.2	chr18	-	178	1	Antisense	novelGene_ENSMUSG00000036299.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCGGAGCAAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	75141623	75141445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75141400_75141600
ES.16872.1	chr18	-	304	1	Intergenic	novelGene_14043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAATAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	75147548	75147244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75147200_75147500
ES.16872.2	chr18	-	177	1	Intergenic	novelGene_14044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCTAGCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	75147546	75147369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75147400_75147500
ES.16873.1	chr18	+	3581	14	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-111	1407	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	52.5754459305187	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTCAGTGAGTGACATT	NA	False	NA	NA	False	NA	NA	NA	75151740	75285506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75283751
ES.16873.10	chr18	+	2598	13	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-37	-56016	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	73.1316829804672	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGGGCTCTTTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	75151814	75364019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75213273_75213400_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060
ES.16873.11	chr18	+	2866	18	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.1353336193383	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151816	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189967_75192895_75193135_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.12	chr18	+	1807	11	NNC	ENSMUSG00000035765.11	novel	1571	9	NA	NA	-22	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.6233771787663	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	75151829	75239458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75235289_75235460_75235840_75235917_75238937
ES.16873.13	chr18	+	1417	8	NIC	ENSMUSG00000035765.11	novel	1571	9	NA	NA	-21	-32	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	70.2363357326025	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	75151830	75239458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75238937
ES.16873.14	chr18	+	2535	18	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.1989242952986	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATGTGACTTATTTTT	NA	False	NA	16	True	AATAAA	-16	NA	75151836	75420033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75208409_75208472_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.15	chr18	+	2416	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	50.7782787592293	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACTTATTTTTAAAC	NA	False	NA	20	True	AATAAA	-20	NA	75151856	75420037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252222_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.16	chr18	+	2178	15	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	54.3467701760779	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151864	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.17	chr18	+	2529	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	158	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	48.8575736196549	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATGTGACTTATTTTT	NA	False	NA	16	True	AATAAA	-16	NA	75152024	75420033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152300_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.18	chr18	+	2848	16	NNC	ENSMUSG00000035765.11	novel	4307	5	NA	NA	-10723	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.4091252406099	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75169671	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75170367_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75363060_75363244_75376355_75376470_75419690
ES.16873.19	chr18	+	2613	2	NNC	ENSMUSG00000035765.11	novel	1571	9	NA	NA	-11064	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	75236664	75239490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75238725_75238937
ES.16873.2	chr18	+	1912	11	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.2705302648871	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151776	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.20	chr18	+	1377	9	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.2411853282166	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	2036	False	NA	18	True	AATAAA	-18	NA	75247889	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75248008_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.21	chr18	+	1615	7	NNC	ENSMUSG00000035765.11	novel	556	3	NA	NA	3469	-56020	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	67.883273999483	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAATTTGGGGCTCTTTT	5344	False	NA	NA	False	AATAAA	-19	NA	75251197	75364015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75251241_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060
ES.16873.22	chr18	+	955	6	ISM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	106638	0	-2	0	3prime_fragment	FALSE	canonical	3	162	junction_2	26.7252689415841	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75258493	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.23	chr18	+	897	6	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	1263	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.1859143286025	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75259758	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75259816_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.24	chr18	+	962	4	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	96956	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.011941182073	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAACATGTGACTTAT	NA	False	NA	12	True	AATAAA	-12	NA	75355451	75420029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75355778_75363060_75363244_75376355_75376470_75419690
ES.16873.25	chr18	+	511	2	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	120207	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	8126	False	NA	18	True	AATAAA	-18	NA	75378702	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75378869_75419690
ES.16873.26	chr18	+	968	2	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	121666	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	9585	False	NA	18	True	AATAAA	-18	NA	75380161	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75380785_75419690
ES.16873.3	chr18	+	2536	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-74	-6	-70	6	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTATTTTTAAACTTCT	NA	False	NA	24	True	AATAAA	-24	NA	75151781	75420041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.4	chr18	+	2049	13	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-63	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	56.8014940139978	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATGTGACTTATTTTT	NA	False	NA	16	True	AATAAA	-16	NA	75151788	75420033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.5	chr18	+	2655	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-62	-137	-58	137	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTCTATGTGTAT	NA	False	NA	NA	False	TATAAA	-22	NA	75151793	75420172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.6	chr18	+	2332	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	49.9165525875157	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151796	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75376355_75376470_75419690
ES.16873.7	chr18	+	2430	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	51.8457541388128	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151808	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ES.16873.8	chr18	+	2817	15	ISM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	-45	56017	-41	-56017	5prime_fragment	FALSE	canonical	3	162	junction_13	14.7406144473599	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGGGGCTCTTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	75151810	75364018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060
ES.16873.9	chr18	+	2493	17	NNC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	50.5592165188504	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151812	75420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363066_75363244_75376355_75376470_75419690
ES.16874.1	chr18	+	1425	2	Antisense	novelGene_ENSMUSG00000102047.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTCCTACCTGTA	2036	False	NA	NA	False	TTTAAA	-9	NA	75426719	75439221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_75426819_75437895
ES.16874.2	chr18	+	3536	3	Intergenic	novelGene_14050	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9431	False	NA	NA	False	NA	NA	NA	75434114	75439550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75434621_75436312_75436386_75436593
ES.16875.1	chr18	+	150	1	Intergenic	novelGene_14054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	75454787	75454937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75454800_75454900
ES.16876.1	chr18	+	2757	1	Intergenic	novelGene_14055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGGAGGCCAGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	75461199	75463956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75461200_75464000
ES.16877.1	chr18	+	178	1	Intergenic	novelGene_14057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGACTTTCAAGTCT	NA	False	NA	NA	False	NA	NA	NA	75468328	75468506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75468300_75468500
ES.16878.1	chr18	+	180	1	Intergenic	novelGene_14063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAGAGAGAGAGAGAG	6176	False	NA	NA	False	NA	NA	NA	75494605	75494785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75494600_75494800
ES.16879.1	chr18	+	4503	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-225	0	-225	0	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	False	NA	19	True	ATTAAA	-24	NA	75500374	75529006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ES.16879.10	chr18	+	6103	2	ISM	ENSMUSG00000025880.12	ENSMUST00000168918.8	1882	5	3063	-447	1970	-9	intron_retention	FALSE	canonical	3	1704	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGCATCCCTTGTTGT	NA	False	NA	10	True	ATTAAA	-15	NA	75505016	75528997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_75509020_75526897
ES.16879.11	chr18	+	2237	3	NNC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	707	-8	intron_retention	FALSE	canonical	0	0	junction_1	852	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCATCCCTTGTTGTT	NA	False	NA	11	True	ATTAAA	-16	NA	75508691	75528998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75508756_75508947_75509020_75526897
ES.16879.12	chr18	+	4963	1	Intergenic	novelGene_14064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTTTTTGAAATATTA	NA	False	NA	NA	False	AAAAAG	-8	NA	75509359	75514322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75509400_75514300
ES.16879.13	chr18	+	3845	1	NIC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	17168	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGCATCCCTTGTTGT	NA	False	NA	10	True	ATTAAA	-15	NA	75525152	75528997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75525200_75529000
ES.16879.14	chr18	+	1982	1	NIC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	18906	-134	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAACATGCCAAATTAAA	NA	False	NA	-26	True	AATAAA	-32	NA	75526890	75528872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75526900_75528900
ES.16879.2	chr18	+	4276	2	NIC	ENSMUSG00000025880.12	novel	793	3	NA	NA	-222	-95	intron_retention	FALSE	canonical	2	11	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTGTTTTTTTCTATG	NA	False	NA	13	True	ATTAAA	-20	NA	75500377	75528911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_75502640_75526897
ES.16879.3	chr18	+	4411	3	FSM	ENSMUSG00000025880.12	ENSMUST00000174843.8	793	3	-1670	-1948	-209	-1	multi-exon	FALSE	canonical	3	56	junction_2	848	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGTTGTTCAGAGCT	NA	False	NA	18	True	ATTAAA	-23	NA	75500390	75529005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75502640_75503965_75504020_75526897
ES.16879.4	chr18	+	4372	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-195	101	-195	-101	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTGGTGTTTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	75500404	75528905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ES.16879.6	chr18	+	4232	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	-165	211	-165	-211	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTTATGTATTGTG	NA	False	NA	NA	False	TATAAA	-39	NA	75500434	75528795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ES.16879.7	chr18	+	4428	4	NNC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	-165	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	763.997091326633	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGCATCCCTTGTTGT	NA	False	NA	10	True	ATTAAA	-15	NA	75500434	75528997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75502640_75503971_75504020_75508944_75509020_75526897
ES.16879.8	chr18	+	4411	4	NNC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	-165	-7	intron_retention	FALSE	canonical	1	1	junction_1	763.527922795813	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCATCCCTTGTTGTTC	NA	False	NA	12	True	ATTAAA	-17	NA	75500434	75528999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75502640_75503990_75504020_75508944_75509020_75526897
ES.1688.1	chr1	+	1494	2	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156766569	156773857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156766647_156772440
ES.1688.2	chr1	+	4394	2	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTACACCAGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	156769282	156773892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156770384_156770599
ES.16880.1	chr18	+	3101	1	Intergenic	novelGene_14065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGACGTAAAATGCCAG	NA	False	NA	NA	False	NA	NA	NA	75579305	75582406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75579300_75582400
ES.16881.1	chr18	+	3466	4	Antisense	novelGene_ENSMUSG00000052928.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACTTTCTTGAATGAA	NA	False	NA	NA	False	NA	NA	NA	75595980	75606677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_75596030_75596647_75596704_75598339_75598509_75603485
ES.16881.2	chr18	+	3816	2	Antisense	novelGene_ENSMUSG00000052928.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCATAACTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	75595986	75600420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_75596030_75596647
ES.16882.1	chr18	+	176	1	Intergenic	novelGene_14066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	75618230	75618406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75618200_75618400
ES.16883.1	chr18	+	3108	1	Intergenic	novelGene_14067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCACATCCTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	75644491	75647599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75644500_75647600
ES.16884.1	chr18	-	201	1	Intergenic	novelGene_14045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACATGTTCCCAATCCT	NA	False	NA	NA	False	NA	NA	NA	75156093	75155892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75155900_75156100
ES.16885.1	chr18	-	3677	2	Antisense	novelGene_ENSMUSG00000035765.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAATTTCTCCACAGG	NA	False	NA	NA	False	NA	NA	NA	75192699	75188559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75189994_75190456
ES.16886.1	chr18	-	210	1	Intergenic	novelGene_14046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTTCGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	75225938	75225728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75225700_75225900
ES.16887.1	chr18	-	6126	1	Antisense	novelGene_ENSMUSG00000035765.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75261444	75255318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75255300_75261400
ES.16888.1	chr18	-	7194	1	Intergenic	novelGene_14047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACATTCAGAGGTGTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	75306910	75299716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75299700_75306900
ES.16889.1	chr18	-	1671	3	Antisense	novelGene_ENSMUSG00000035765.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACATGTGTTCATGAC	NA	False	NA	NA	False	AATAAA	-15	NA	75328378	75323916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75324996_75327096_75327256_75327945
ES.1689.1	chr1	-	6969	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-72	-3950	-1	0	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGTGGGCTTTTTT	NA	False	NA	1	True	AATAAA	-14	NA	156767173	156631735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.10	chr1	-	4570	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-46	-287	4	287	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGGGATTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	156767159	156634042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.11	chr1	-	4596	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-44	-1605	-8	249	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCAGTGTGTATTTGTG	NA	False	NA	NA	False	NA	NA	NA	156767145	156634080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.12	chr1	-	4302	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-64	-1	1	1	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGACTGGGATATTGTAT	NA	False	NA	-1	True	ATTAAA	-19	NA	156767177	156634328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.13	chr1	-	4360	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-56	-1357	6	1	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGACTGGGATATTGTAT	NA	False	NA	-1	True	ATTAAA	-19	NA	156767157	156634328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.14	chr1	-	4116	17	NIC	ENSMUSG00000026594.15	novel	6863	19	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	68.5797892968475	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACCGACTGGGATATTG	NA	False	NA	-4	True	ATTAAA	-16	NA	156767150	156634331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156735208_156735349_156767058
ES.1689.15	chr1	-	4421	21	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACCGACTGGGATATTG	NA	False	NA	-4	True	ATTAAA	-16	NA	156767116	156634331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.16	chr1	-	4363	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	30	5	-2	-5	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAGACCGACTGGGATA	NA	False	NA	-7	True	ATTAAA	-13	NA	156767139	156634334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.17	chr1	-	3907	16	NIC	ENSMUSG00000026594.15	novel	6863	19	NA	NA	0	-143	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	83.3620217285226	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGAATCCTGTTATGC	NA	False	NA	NA	False	ATTAAA	-23	NA	156767178	156634472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156735208_156735349_156767058
ES.1689.18	chr1	-	4166	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-74	145	-9	-145	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATGAATCCTGTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	156767187	156634474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.19	chr1	-	4310	21	NNC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	5	-152	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_19	94.4042371930413	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTACTGGAGAATGAATC	NA	False	NA	NA	False	ATTAAA	-14	NA	156767158	156634481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729458_156735208_156735349_156767058
ES.1689.2	chr1	-	7045	20	NNC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	-314	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	90.1210020686101	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGTGGGCTTTTTT	NA	False	NA	1	True	AATAAA	-14	NA	156767510	156631735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767346
ES.1689.20	chr1	-	3010	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-104	1331	-21	25	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCAGAACATTGTATTC	NA	False	NA	-6	True	TATAAA	-27	NA	156767217	156635660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.21	chr1	-	3052	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-105	0	-10	0	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767206	156635685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.22	chr1	-	3066	20	NNC	ENSMUSG00000026594.15	novel	2947	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	82.9724447801665	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767138	156635685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156719050_156719211_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.23	chr1	-	3109	21	NIC	ENSMUSG00000026594.15	novel	2947	20	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767158	156635685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.24	chr1	-	3035	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	7	1356	1	0	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767162	156635685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.25	chr1	-	5470	19	NIC	ENSMUSG00000026594.15	novel	2958	20	NA	NA	5	0	intron_retention	FALSE	canonical	2	13	junction_18	68.7409028773631	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767158	156635685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156767058
ES.1689.26	chr1	-	2942	19	NNC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	65.1345236632579	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767178	156635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735201_156735349_156767058
ES.1689.27	chr1	-	3390	3	NIC	ENSMUSG00000026594.15	novel	6863	19	NA	NA	-4396	-5	intron_retention	FALSE	canonical	3	251	junction_1	6	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	8991	False	NA	-42	True	AATAAA	-27	NA	156645534	156635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156641114_156645310
ES.1689.28	chr1	-	5517	19	NIC	ENSMUSG00000026594.15	novel	2947	20	NA	NA	7	-5	intron_retention	FALSE	canonical	3	93	junction_5	45.8360268568807	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767156	156635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.29	chr1	-	2809	18	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.4761523937792	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767158	156635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.3	chr1	-	6891	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-60	-2594	-1	0	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGTGGGCTTTTTT	NA	False	NA	1	True	AATAAA	-14	NA	156767173	156631735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.30	chr1	-	2974	20	FSM	ENSMUSG00000026594.15	ENSMUST00000191605.7	2958	20	-21	5	-3	-5	multi-exon	FALSE	canonical	2	13	junction_19	72.7811198920598	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	False	NA	-42	True	AATAAA	-27	NA	156767199	156635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156767058
ES.1689.31	chr1	-	3134	19	NNC	ENSMUSG00000026594.15	novel	4237	19	NA	NA	-471	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.2745845744819	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATATAAAACCTTTTC	NA	False	NA	-44	True	AATAAA	-25	NA	156767667	156635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767346
ES.1689.33	chr1	-	4873	18	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	-5	-10	intron_retention	FALSE	canonical	3	179	junction_4	32.959868646226	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAAAATATAAAACCTT	NA	False	NA	-47	True	AATAAA	-22	NA	156767142	156635701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.34	chr1	-	2995	20	NNC	ENSMUSG00000026594.15	novel	2947	20	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	75.7006423857666	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAAAATATAAAACCTT	NA	False	NA	-47	True	AATAAA	-22	NA	156767158	156635701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735201_156735349_156767058
ES.1689.35	chr1	-	3214	22	NNC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	96.2286345812861	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAAAATATAAAACCTT	NA	False	NA	-47	True	AATAAA	-22	NA	156767158	156635701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156725570_156725692_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.37	chr1	-	2300	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-58	705	4	9	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTACTAATTTTGGA	NA	False	NA	3	True	AATAAA	-25	NA	156767159	156636390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.38	chr1	-	4219	19	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	5	1	intron_retention	FALSE	canonical	3	20	junction_14	78.9832964057028	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAACTTTGTACTA	NA	False	NA	-5	True	AATAAA	-17	NA	156767158	156636398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.39	chr1	-	3130	5	ISM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	117245	713	8561	1	intron_retention	FALSE	canonical	3	235	junction_2	9.95929214352105	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAACTTTGTACTA	6664	False	NA	-5	True	AATAAA	-17	NA	156649856	156636398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382
ES.1689.4	chr1	-	6822	19	NIC	ENSMUSG00000026594.15	novel	2958	20	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	13	junction_18	61.6571814527015	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATTGTGTGGGCTTTTT	NA	False	NA	0	True	AATAAA	-13	NA	156767165	156631736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156767058
ES.1689.40	chr1	-	2073	19	NIC	ENSMUSG00000026594.15	novel	3346	20	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	64.2745845744819	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156766942	156636399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156766921
ES.1689.41	chr1	-	2317	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	11	2070	5	0	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767158	156636399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.42	chr1	-	2151	19	NIC	ENSMUSG00000026594.15	novel	2958	20	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_18	61.6571814527015	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767157	156636399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735289_156767058
ES.1689.43	chr1	-	2245	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-78	2070	5	0	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767191	156636399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.44	chr1	-	4110	18	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	5	-3	intron_retention	FALSE	canonical	3	179	junction_4	32.7297839028195	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTTTTAACTTTGT	NA	False	NA	-9	True	AATAAA	-13	NA	156767158	156636402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.45	chr1	-	2525	16	ISM	ENSMUSG00000026594.15	ENSMUST00000189316.7	2924	17	38	2340	2	13	5prime_fragment	FALSE	canonical	3	93	junction_1	61.3686130417387	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGTTTGTCTTTAATA	NA	False	NA	NA	False	AAAAAG	-18	NA	156767099	156646433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.46	chr1	-	2506	15	FSM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	5	-13	5	13	multi-exon	FALSE	canonical	3	179	junction_1	35.9233878680501	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGTTTGTCTTTAATA	NA	False	NA	NA	False	AAAAAG	-18	NA	156767158	156646433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.47	chr1	-	11315	12	NIC	ENSMUSG00000026594.15	novel	2498	15	NA	NA	5	-5	intron_retention	FALSE	canonical	3	193	junction_3	27.825311029426	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAACAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	156767158	156646470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.48	chr1	-	4464	12	NNC	ENSMUSG00000026594.15	novel	2498	15	NA	NA	-4	2790	intron_retention	FALSE	canonical	1	8	junction_10	75.7632240318644	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTTTTACTTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	156767117	156653277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729458_156735208_156735349_156767058
ES.1689.49	chr1	-	3824	13	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	8	6832	8	2789	5prime_fragment	FALSE	canonical	3	193	junction_4	28.2915132543705	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTAGTTTTTACTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	156767155	156653278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.50	chr1	-	1739	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	5	9600	5	21	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGGCAGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	156767158	156656046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.51	chr1	-	3871	11	NIC	ENSMUSG00000026594.15	novel	2498	15	NA	NA	-1	15	intron_retention	FALSE	canonical	3	193	junction_2	27.7166015232748	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAGAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	156767138	156656106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156656699_156657954_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.52	chr1	-	1407	12	ISM	ENSMUSG00000026594.15	ENSMUST00000190648.7	2498	15	5	9932	5	-257	5prime_fragment	FALSE	canonical	3	193	junction_3	27.825311029426	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATTTATTTTTTCTT	NA	False	NA	NA	False	AGTAAA	-19	NA	156767158	156656378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.53	chr1	-	1406	12	NNC	ENSMUSG00000026594.15	novel	2498	15	NA	NA	4	-258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.9126444506234	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGATTTATTTTTTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	156767159	156656379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729453_156735201_156735349_156767058
ES.1689.54	chr1	-	666	6	ISM	ENSMUSG00000026594.15	ENSMUST00000172057.8	6863	19	12	80261	3	2666	5prime_fragment	FALSE	canonical	0	0	junction_4	105.953574739128	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTCTTGCACTTTGTT	NA	False	NA	NA	False	AATATA	-17	NA	156767160	156711996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156735208_156735349_156767058
ES.1689.55	chr1	-	3877	3	NNC	ENSMUSG00000026594.15	novel	6863	19	NA	NA	5	-3368	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	148.5	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGTACAAAAGCTACTTT	NA	False	NA	NA	False	NA	NA	NA	156767158	156731535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156733110_156733145_156735349_156767058
ES.1689.6	chr1	-	7041	21	NIC	ENSMUSG00000026594.15	novel	4398	20	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGATTGTGTGGGCTTT	NA	False	NA	-2	True	AATAAA	-11	NA	156767143	156631738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.7	chr1	-	7823	2	ISM	ENSMUSG00000026594.15	ENSMUST00000189208.2	587	3	-678	-4657	-678	-7	intron_retention	FALSE	canonical	3	251	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATAGATTGTGTGGG	NA	False	NA	-6	True	AATAAA	-7	NA	156641816	156631742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156636764_156639014
ES.1689.8	chr1	-	6915	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	70	-2587	2	-7	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATAGATTGTGTGGG	NA	False	NA	-6	True	AATAAA	-7	NA	156767099	156631742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.1689.9	chr1	-	5480	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-61	-2472	1	1116	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACTTAAGTACCTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	156767162	156633213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ES.16890.1	chr18	-	1143	1	Intergenic	novelGene_14048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGAGTTCTCATGGAG	396	False	NA	NA	False	ATTAAA	-13	NA	75377857	75376714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75376700_75377900
ES.16891.1	chr18	-	4262	2	Intergenic	novelGene_14049	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCAACCAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	75576123	75399024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75399157_75571993
ES.16891.12	chr18	-	2662	7	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	11	6692	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1.34370962471642	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCTCCTTTGGG	NA	False	NA	-23	True	AATAAA	-13	NA	75500148	75491710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75493577_75497000_75497145_75497243_75497402_75497781_75497899_75498145_75498307_75498865_75498934_75500000
ES.16891.13	chr18	-	1912	2	Intergenic	novelGene_14062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCTCCTTTGGG	NA	False	NA	-23	True	AATAAA	-13	NA	75493825	75491710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75493577_75493779
ES.16891.14	chr18	-	3227	3	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	166	6691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGGTCTCTCCTTTGG	NA	False	NA	-24	True	AATAAA	-12	NA	75499993	75491711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75493577_75498145_75498934_75499419
ES.16891.15	chr18	-	2723	3	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	-51	6689	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTTGGTCTCTCCTTT	NA	False	NA	-26	True	AATAAA	-10	NA	75500210	75491713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75493577_75498145_75498934_75500138
ES.16891.16	chr18	-	3542	6	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	268	6689	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1.4142135623731	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTTGGTCTCTCCTTT	NA	False	NA	-26	True	AATAAA	-10	NA	75499891	75491713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75493577_75497000_75497145_75497243_75497402_75497781_75497899_75498145_75498934_75499419
ES.16891.17	chr18	-	3174	6	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	75	6689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.78885438199983	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTTGGTCTCTCCTTT	NA	False	NA	-26	True	AATAAA	-10	NA	75500084	75491713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75493577_75497000_75497145_75497243_75497402_75497781_75497919_75498145_75498934_75500000
ES.16891.18	chr18	-	1697	3	NNC	ENSMUSG00000092569.2	novel	690	2	NA	NA	336	6689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTTGGTCTCTCCTTT	NA	False	NA	-26	True	AATAAA	-10	NA	75499823	75491713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75492752_75498678_75498934_75499419
ES.16891.19	chr18	-	2787	4	Antisense	novelGene_ENSMUSG00000025880.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACGTTAGGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	75528482	75501565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75502636_75503962_75504017_75508941_75509013_75526890
ES.16891.2	chr18	-	1322	1	Intergenic	novelGene_14051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75438336	75437014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75437000_75438300
ES.16891.20	chr18	-	2604	1	Antisense	novelGene_ENSMUSG00000025880.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACGTTAGGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	75504169	75501565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75501600_75504200
ES.16891.22	chr18	-	2711	3	Antisense	novelGene_ENSMUSG00000025880.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACGTTAGGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	75528481	75501565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75502636_75503962_75504017_75526894
ES.16891.23	chr18	-	7260	3	Antisense	novelGene_ENSMUSG00000025880.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	6668	False	NA	NA	False	NA	NA	NA	75515096	75501584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_75502636_75503962_75504017_75508941
ES.16891.24	chr18	-	6159	12	FSM	ENSMUSG00000052928.10	ENSMUST00000165559.3	6031	12	-109	-19	-109	19	multi-exon	FALSE	canonical	0	0	junction_1	2.63165724111457	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTATGCTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	75830734	75564275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653179_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770410_75830462
ES.16891.25	chr18	-	6000	12	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	391	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.74238238709061	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTATGCTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	75830234	75564275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770410_75830052
ES.16891.26	chr18	-	5802	12	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	140	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.74238238709061	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATAAACGAT	NA	False	NA	NA	False	NA	NA	NA	75830485	75564317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770413_75830462
ES.16891.27	chr18	-	2393	12	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	-137	-3706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.51606409147237	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGGTCACCCGTC	NA	False	NA	NA	False	NA	NA	NA	75830762	75568000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770410_75830462
ES.16891.28	chr18	-	5229	10	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	-133	-37270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2.70801280154532	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATTTATTTATGTATT	NA	False	NA	NA	False	TTTAAA	-14	NA	75830758	75601564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75605092_75652809_75653110_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770413_75830462
ES.16891.29	chr18	-	4324	10	NNC	ENSMUSG00000052928.10	novel	6031	12	NA	NA	-140	-38251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.8458329944146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AAGAAA	-29	NA	75830765	75602545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_75605092_75652809_75653179_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770413_75830462
ES.16891.3	chr18	-	132	1	Intergenic	novelGene_14052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	75443430	75443298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75443300_75443400
ES.16891.30	chr18	-	2101	9	ISM	ENSMUSG00000052928.10	ENSMUST00000165559.3	6031	12	116	87933	116	-87933	5prime_fragment	FALSE	canonical	0	0	junction_1	2.59807621135332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTCTTGCTGCCTGG	NA	False	NA	NA	False	AAGAAA	-13	NA	75830509	75652227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_75653179_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770410_75830462
ES.16891.4	chr18	-	131	2	Intergenic	novelGene_14053	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	75444314	75443299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75443381_75444264
ES.16891.5	chr18	-	162	1	Intergenic	novelGene_14056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75466676	75466514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75466500_75466700
ES.16891.6	chr18	-	1937	1	Intergenic	novelGene_14058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	75476418	75474481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75474500_75476400
ES.16891.7	chr18	-	953	2	Intergenic	novelGene_14059	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACGGTTCCTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	75477964	75476713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75477628_75477925
ES.16891.8	chr18	-	3259	1	Intergenic	novelGene_14060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACGGTTCCTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	75479972	75476713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75476700_75480000
ES.16891.9	chr18	-	171	1	Intergenic	novelGene_14061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGAAAGAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	75490614	75490443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_75490400_75490600
ES.16892.1	chr18	+	161	1	Intergenic	novelGene_14068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	75858295	75858456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_75858300_75858500
ES.16893.1	chr18	+	4384	6	NNC	ENSMUSG00000044646.16	novel	3571	6	NA	NA	-109	-416	intron_retention	FALSE	canonical	0	0	junction_1	1.26491106406735	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTAGTTCTTTTTGTCG	NA	False	NA	NA	False	TATAAA	-18	NA	75953139	76281216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75953437_76027704_76027827_76033618_76033833_76144699_76144762_76269897_76271122_76278751
ES.16893.10	chr18	+	3611	1	NIC	ENSMUSG00000044646.16	novel	4572	5	NA	NA	85074	-419	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTAGTTCTTTTTG	9131	False	NA	NA	False	TATAAA	-15	NA	76277602	76281213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76277600_76281200
ES.16893.2	chr18	+	4229	6	NNC	ENSMUSG00000044646.16	novel	3571	6	NA	NA	3	-417	intron_retention	FALSE	canonical	0	0	junction_1	1.26491106406735	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTAGTTCTTTTTGTC	NA	False	NA	NA	False	TATAAA	-17	NA	75953251	76281215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_75953437_76033618_76033833_76096194_76096275_76144699_76144762_76269897_76271122_76278751
ES.16893.3	chr18	+	4161	5	NNC	ENSMUSG00000044646.16	novel	4572	5	NA	NA	79613	-419	intron_retention	FALSE	canonical	0	0	junction_2	1.4790199457749	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTAGTTCTTTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	76032898	76281213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76033098_76033618_76033833_76144699_76144762_76269897_76271122_76278751
ES.16893.4	chr18	+	187	1	Intergenic	novelGene_14070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGAGGAAGTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	76057713	76057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76057700_76057900
ES.16893.5	chr18	+	3899	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	-50	-1702	-50	-416	multi-exon	FALSE	canonical	0	0	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTAGTTCTTTTTGTCG	NA	False	NA	NA	False	TATAAA	-18	NA	76192478	76281216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76192689_76269897_76271122_76278751
ES.16893.6	chr18	+	4275	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	-18	-2110	-18	-8	multi-exon	FALSE	canonical	0	0	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATGATATTGAGAGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	76192510	76281624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76192689_76269897_76271122_76278751
ES.16893.7	chr18	+	2050	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	90	7	90	-7	multi-exon	FALSE	canonical	0	0	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAATGAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	76192618	76279507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76192689_76269897_76271122_76278751
ES.16893.8	chr18	+	3265	1	Intergenic	novelGene_14071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	76196863	76200128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76196900_76200100
ES.16893.9	chr18	+	2894	2	Antisense	novelGene_ENSMUSG00000117797.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	76219572	76231258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_76219716_76228507
ES.16894.1	chr18	-	183	1	Intergenic	novelGene_14069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6860	False	NA	NA	False	NA	NA	NA	76008793	76008610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_76008600_76008800
ES.16895.1	chr18	+	160	1	Intergenic	novelGene_14072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	76367295	76367455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76367300_76367500
ES.16896.1	chr18	+	2696	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-269	5662	-269	7	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGAAGTCCTTGACCT	NA	False	NA	16	True	AATAAA	-29	NA	76374381	76438372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.11	chr18	+	8186	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-32	784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.3213342899537	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGGGATCCAGTTTGTT	NA	False	NA	14	True	ATTAAA	-29	NA	76374739	76444818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.12	chr18	+	8106	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-31	782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.064393869105	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATGGGATCCAGTTTG	NA	False	NA	12	True	ATTAAA	-27	NA	76374740	76444816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435226_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.15	chr18	+	2010	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	191	-556	-154	-8	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGTGGATTAACTT	NA	False	NA	1	True	AATAAA	-14	NA	76374962	76438357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.16	chr18	+	1873	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	191	-419	-154	-145	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTTATTTTTGTG	NA	False	NA	16	True	TATAAA	-27	NA	76374962	76438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.17	chr18	+	1963	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	312	5814	-154	-145	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGTTATTTTTGTG	NA	False	NA	16	True	TATAAA	-27	NA	76374962	76438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.18	chr18	+	8470	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	192	-7017	-153	784	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGGGATCCAGTTTGTT	NA	False	NA	14	True	ATTAAA	-29	NA	76374963	76444818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.19	chr18	+	1628	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	316	6145	-150	88	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGCACTTGAGGTCT	NA	False	NA	NA	False	NA	NA	NA	76374966	76437889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.2	chr18	+	3100	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-243	5232	-243	437	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGCCTCATTTTACT	NA	False	NA	19	True	AATAAA	-24	NA	76374407	76438802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.20	chr18	+	8320	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-149	1146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.3213342899537	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGTGTTTGTTGTTTT	NA	False	NA	NA	False	AATATA	-15	NA	76374967	76445180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.21	chr18	+	4398	7	NIC	ENSMUSG00000024563.17	novel	1645	10	NA	NA	-147	426	intron_retention	FALSE	canonical	0	0	junction_1	99.6070055546072	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGCCGACCTTTTGC	NA	False	NA	8	True	AATAAA	-13	NA	76374969	76438791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76375051_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76435599_76437677
ES.16896.22	chr18	+	7772	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	320	-3	-146	3	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGAGTATGGAATGA	NA	False	NA	13	True	AATAAA	-16	NA	76374970	76444037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.23	chr18	+	7866	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-146	785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	102.477753683421	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGATCCAGTTTGTTT	NA	False	NA	15	True	ATTAAA	-30	NA	76374970	76444819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.24	chr18	+	7097	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-146	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.064393869105	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGAGTATGGAATGA	NA	False	NA	13	True	AATAAA	-16	NA	76374970	76444037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435226_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.26	chr18	+	2035	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-144	14	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	78.8274064015809	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGACCTTCATGTG	NA	False	NA	23	True	AATAAA	-36	NA	76374972	76438379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435226_76435288_76435453_76435599_76437677
ES.16896.27	chr18	+	8914	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	322	-1147	-144	1147	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGTTTGTTGTTTTG	NA	False	NA	NA	False	AATATA	-16	NA	76374972	76445181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.28	chr18	+	3109	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	322	4658	-144	1011	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTCAAATATTTATT	NA	False	NA	NA	False	NA	NA	NA	76374972	76439376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.29	chr18	+	3594	5	ISM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	325	18978	-141	-6465	5prime_fragment	FALSE	canonical	3	254	junction_3	6.75925291729789	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAAAATGGTACTCTG	NA	False	NA	NA	False	NA	NA	NA	76374975	76425056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109
ES.16896.30	chr18	+	5450	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-141	-1711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.283110584025	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCCTAAACTACACCCA	NA	False	NA	NA	False	AATAAA	-15	NA	76374975	76442323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395515_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.32	chr18	+	8569	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-132	777	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	79.5603544486825	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCATTATGGGATCCA	NA	False	NA	7	True	ATTAAA	-22	NA	76374984	76444811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435636_76437677
ES.16896.33	chr18	+	7059	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-123	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	102.477753683421	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGTTGAGTATGGAAT	NA	False	NA	11	True	AATAAA	-14	NA	76374993	76444035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.34	chr18	+	7009	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-123	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	103.198304249634	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGAGTTGAGTATGGA	NA	False	NA	9	True	AATAAA	-12	NA	76374993	76444033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435453_76435599_76437677_76440877_76441474
ES.16896.35	chr18	+	4663	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	344	3082	-122	2587	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTGTTTTTAAGCCCT	NA	False	NA	NA	False	AAGAAA	-43	NA	76374994	76440952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.36	chr18	+	4177	9	NIC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-121	-147	intron_retention	FALSE	canonical	3	248	junction_5	10.6858551365813	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCTCCGTTATTTTTG	NA	False	NA	14	True	TATAAA	-25	NA	76374995	76438218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76435599_76437677
ES.16896.37	chr18	+	5000	11	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	81.5411552530377	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTAACTTGGAAGTCC	NA	False	NA	9	True	AATAAA	-22	NA	76374995	76438365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76423055_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.38	chr18	+	11076	9	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-114	771	intron_retention	FALSE	canonical	0	0	junction_8	88.4080560526019	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTACCATGTCATTATGG	NA	False	NA	1	True	ATTAAA	-16	NA	76375002	76444805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76422245_76425980_76426056_76431518_76431573_76432853_76435599_76437677_76440877_76441474
ES.16896.40	chr18	+	2128	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-64	-143	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGTTATTTTTGTGTC	NA	False	NA	18	True	TATAAA	-29	NA	76375052	76438222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.41	chr18	+	8094	12	NNC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-38	784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	100.261558761518	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGGGATCCAGTTTGTT	NA	False	NA	14	True	ATTAAA	-29	NA	76375078	76444818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440881_76441484
ES.16896.42	chr18	+	1654	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-25	114	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCACCTTGTGGAATC	NA	False	NA	NA	False	AAAACA	-20	NA	76375219	76437915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.43	chr18	+	2005	10	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	-24	-8	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	101.753272158991	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGTGGATTAACTT	NA	False	NA	1	True	AATAAA	-14	NA	76375220	76438357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_76375304_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.44	chr18	+	1452	9	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	24420	-151	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	86.9076377541123	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCACTTCTCCGTTATT	NA	False	NA	10	True	TATAAA	-21	NA	76419982	76438214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435226_76435288_76435453_76435599_76437677
ES.16896.45	chr18	+	1026	7	ISM	ENSMUSG00000024563.17	ENSMUST00000113930.3	1305	8	25506	-27	25506	27	3prime_fragment	FALSE	canonical	3	248	junction_2	15.1959424408842	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTAGTGGAGTGCTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	76421068	76435740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453
ES.16896.46	chr18	+	1513	1	Intergenic	novelGene_14073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTGTCAGTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	76428512	76430025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76428500_76430000
ES.16896.47	chr18	+	3568	1	Genic_Genomic	ENSMUSG00000024563.17	novel	NA	NA	NA	NA	46306	1402	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTTGTTAACCTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	76441868	76445436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_76441900_76445400
ES.16896.48	chr18	+	4059	1	Intergenic	novelGene_14074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACATTACCAGAATA	NA	False	NA	NA	False	ATTAAA	-13	NA	76444167	76448226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76444200_76448200
ES.16896.49	chr18	+	2235	1	Intergenic	novelGene_14075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTACAGTTTATGTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	76446093	76448328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76446100_76448300
ES.16896.5	chr18	+	7662	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-168	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.3213342899537	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGAGTATGGAATGA	NA	False	NA	13	True	AATAAA	-16	NA	76374482	76444037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.6	chr18	+	9030	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-156	-785	-156	785	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGATCCAGTTTGTTT	NA	False	NA	15	True	ATTAAA	-30	NA	76374494	76444819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.7	chr18	+	8863	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	-155	-619	-155	619	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTAAATGTTCTGTG	NA	False	NA	9	True	ATTAAA	-23	NA	76374495	76444653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16896.8	chr18	+	8259	12	NNC	ENSMUSG00000024563.17	novel	8089	11	NA	NA	-149	619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.3213342899537	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTAAATGTTCTGTG	NA	False	NA	9	True	ATTAAA	-23	NA	76374501	76444653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677_76440877_76441474
ES.16896.9	chr18	+	2678	10	FSM	ENSMUSG00000024563.17	ENSMUST00000091831.13	1645	10	-40	-993	-40	429	multi-exon	FALSE	canonical	3	36	junction_2	75.1282031834933	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCGACCTTTTGCCTC	NA	False	NA	11	True	AATAAA	-16	NA	76374731	76438794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_76375051_76395510_76395799_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ES.16897.1	chr18	-	766	1	Antisense	novelGene_ENSMUSG00000024563.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTGATTTGCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	76374873	76374107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_76374100_76374900
ES.16898.1	chr18	+	1193	5	Intergenic	novelGene_14076	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGCGTTTATGAAGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	76469247	76661995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76469340_76568916_76569209_76570506_76570932_76657385_76657620_76661845
ES.16898.2	chr18	+	174	1	Intergenic	novelGene_14078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	76490897	76491071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76490900_76491100
ES.16899.1	chr18	-	187	1	Intergenic	novelGene_14077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCCAGTTTTGAACAC	NA	False	NA	NA	False	NA	NA	NA	76476979	76476792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_76476800_76477000
ES.169.1	chr1	+	2232	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	-93	7	-31	-7	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGACTGGTGCCTTA	NA	False	NA	5	True	NA	NA	NA	21021818	21061058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ES.169.2	chr1	+	2293	11	NNC	ENSMUSG00000041809.6	novel	2146	11	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.57225268630201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGTGCCTTATTTGG	NA	False	NA	10	True	NA	NA	NA	21021836	21061063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049559_21049782_21059591_21059827_21060840
ES.169.3	chr1	+	1992	10	NIC	ENSMUSG00000041809.6	novel	2146	11	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.23807504338587	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGTGCCTTATTTGG	NA	False	NA	10	True	NA	NA	NA	21021841	21061063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_21022021_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ES.169.4	chr1	+	2091	11	NNC	ENSMUSG00000041809.6	novel	2146	11	NA	NA	3503	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.07371385562409	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAATTGAAGACTGGT	NA	False	NA	-1	True	NA	NA	NA	21025414	21061052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21025482_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ES.1690.1	chr1	+	215	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATAAAAGAAAAGTTACA	NA	False	NA	NA	False	NA	NA	NA	156777203	156777418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_156777200_156777400
ES.16900.1	chr18	+	179	1	Intergenic	novelGene_14079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAAATTGTT	NA	False	NA	NA	False	NA	NA	NA	76733310	76733489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_76733300_76733500
ES.16901.1	chr18	-	174	1	Intergenic	novelGene_14080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76972629	76972455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_76972500_76972600
ES.16902.1	chr18	-	215	1	Intergenic	novelGene_14081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTCATTTTCCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	76989595	76989380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_76989400_76989600
ES.16903.1	chr18	-	169	1	Intergenic	novelGene_14082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	76993650	76993481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_76993500_76993600
ES.16904.1	chr18	+	1414	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	1641	junction_2	78	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	77017700	77029308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77027263_77027366_77028208
ES.16904.2	chr18	+	639	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	-16	880	12	36	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTTTTTTTTTTTT	NA	False	NA	20	True	AATAAA	-17	NA	77017724	77028421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
ES.16904.3	chr18	+	501	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	14	887	14	36	multi-exon	FALSE	canonical	3	1641	junction_2	78	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTTTTTTTTTTTT	NA	False	NA	20	True	AATAAA	-17	NA	77017726	77028421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77027263_77027366_77028208
ES.16904.4	chr18	+	1310	2	FSM	ENSMUSG00000090000.3	ENSMUST00000128679.2	335	2	-31	-944	-13	3	multi-exon	FALSE	canonical	3	1797	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTTGACAATAAAACC	NA	False	NA	-13	True	NA	NA	NA	77017727	77028388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77027263
ES.16904.5	chr18	+	1512	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	-2	-7	-2	0	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	77017738	77029308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
ES.16904.6	chr18	+	2216	2	FSM	ENSMUSG00000090000.3	ENSMUST00000128679.2	335	2	-20	-1861	-2	-3	multi-exon	FALSE	canonical	3	1797	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCGTCTGATTTATGC	NA	False	NA	12	True	AATAAA	-14	NA	77017738	77029305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77017913_77027263
ES.16904.7	chr18	+	546	4	NNC	ENSMUSG00000090000.3	novel	1503	4	NA	NA	1	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	773.103414097292	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	77017741	77028367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77017913_77026060_77026175_77027263_77027366_77028208
ES.16904.9	chr18	+	3370	1	NIC	ENSMUSG00000090000.3	novel	1402	3	NA	NA	-1961	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTTGACAATAAAACC	NA	False	NA	-13	True	NA	NA	NA	77025018	77028388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77025000_77028400
ES.16905.1	chr18	+	4028	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	6	1443	6	962	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTATTTGACCAAACCCT	NA	False	NA	NA	False	AATAAA	-20	NA	77031793	77061560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.10	chr18	+	6708	7	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	-1	960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	161.006642375055	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCTATTTGACCAAACC	NA	False	NA	NA	False	AATAAA	-18	NA	77031821	77061558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77055256_77055948
ES.16905.13	chr18	+	4000	7	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	-5	959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.264050562372	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATCTATTTGACCAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	77031834	77061557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038936_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.15	chr18	+	1533	7	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.264050562372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTTAATTAGACA	NA	False	NA	14	True	NA	NA	NA	77031840	77059096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038936_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.17	chr18	+	884	7	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	3	-2543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.071598563476	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAACAGGCCCATTGCT	NA	False	NA	NA	False	AGTAAA	-16	NA	77031842	77056558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77056399
ES.16905.18	chr18	+	1736	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	56	3685	4	217	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAATGAGATCTCGTCT	NA	False	NA	NA	False	NA	NA	NA	77031843	77059318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.19	chr18	+	1612	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	12	1502	12	-5	multi-exon	FALSE	canonical	0	0	junction_2	156.505235979148	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTTAATTAGACA	NA	False	NA	14	True	NA	NA	NA	77032091	77059096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.2	chr18	+	1612	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	7	3858	7	44	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAAGCCTTTAATGTC	NA	False	NA	63	True	NA	NA	NA	77031794	77059145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.21	chr18	+	4051	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	-24	-958	-24	958	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAATCTATTTGACCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	77032108	77061556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.22	chr18	+	3181	5	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	8777	6	8724	-6	3prime_fragment	FALSE	canonical	3	321	junction_2	17.1664644001029	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATGTTTTAATTAGAC	1970	False	NA	13	True	NA	NA	NA	77040856	77059095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.3	chr18	+	1479	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	12	3986	12	-84	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCATTGCAGATACCTA	NA	False	NA	-65	True	TTTAAA	-45	NA	77031799	77059017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.4	chr18	+	4721	8	NNC	ENSMUSG00000025421.16	novel	1538	8	NA	NA	14	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	168.87937972991	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTTAATTAGACA	NA	False	NA	14	True	NA	NA	NA	77031801	77059096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77055262_77055397_77055870_77055971
ES.16905.5	chr18	+	1047	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	18	4412	-17	-510	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGAGAGCTGAGAT	NA	False	NA	NA	False	TATAAA	-16	NA	77031805	77058591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.6	chr18	+	2062	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	25	3390	-10	512	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGTGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	77031812	77059613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.7	chr18	+	5441	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	30	6	-5	-6	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTATATATATATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	77031817	77062997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ES.16905.8	chr18	+	4703	8	NNC	ENSMUSG00000025421.16	novel	1538	8	NA	NA	-1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	168.87937972991	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATGTTTTAATTAGAC	NA	False	NA	13	True	NA	NA	NA	77031821	77059095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77031882_77038808_77038921_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77055281_77055414_77055870_77055971
ES.16906.1	chr18	+	4951	3	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAGTAAGTAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	77095938	77106206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77099803_77103703_77103743_77105158
ES.16907.1	chr18	+	179	1	Intergenic	novelGene_14085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	77106246	77106425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77106200_77106400
ES.16908.1	chr18	+	297	1	Intergenic	novelGene_14086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGACATGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	77107682	77107979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77107700_77108000
ES.16909.1	chr18	+	1794	1	Intergenic	novelGene_14088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAAAATTACATTGCT	160	False	NA	NA	False	NA	NA	NA	77119978	77121772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77120000_77121800
ES.1691.1	chr1	-	148	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTGTGAAGGAAGGT	NA	False	NA	NA	False	NA	NA	NA	156816198	156816050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_156816000_156816200
ES.16910.1	chr18	+	2145	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-27172	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	397.186734137922	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCTTGATTCTTTCA	5913	False	NA	15	True	AATAAA	-25	NA	77125731	77234505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77125998_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.10	chr18	+	2377	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26796	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	438.978620882426	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTCTAATTAAAGAT	6289	False	NA	12	True	AATAAA	-25	NA	77126107	77240812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223652_77232704_77232839_77237756_77237795_77240310
ES.16910.100	chr18	+	4517	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26460	1910	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	378.874869405014	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6625	False	NA	7	True	AATAAA	-18	NA	77126443	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.101	chr18	+	3371	11	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26446	-9319	at_least_one_novel_splicesite	FALSE	canonical	3	1027	junction_9	143.350479594594	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGACTTTTTCTATTC	6639	False	NA	NA	False	ATTAAA	-21	NA	77126457	77225314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475
ES.16910.102	chr18	+	5769	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26445	27	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	269.397486842694	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATAGACTAACAACAAC	6640	False	NA	40	True	AATAAA	-43	NA	77126458	77240840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398_77237795_77240310
ES.16910.103	chr18	+	12060	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26301	1703	intron_retention	FALSE	canonical	3	1027	junction_9	140.60730145743	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTTTTTAAGTAAG	6784	False	NA	4	True	AATAAA	-17	NA	77126602	77243199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698
ES.16910.105	chr18	+	2791	2	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACATAAAACACAAGT	7371	False	NA	NA	False	NA	NA	NA	77127189	77130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77129093_77129766
ES.16910.106	chr18	+	6606	2	Intergenic	novelGene_14091	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGACAGCTAGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	77135142	77141818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77140123_77140192
ES.16910.107	chr18	+	4842	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	-26	-1756	-26	1756	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTATCTTTGCTTGAT	7873	False	NA	57	True	CATAAA	-19	NA	77152877	77243252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.108	chr18	+	2503	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	-26	583	-26	100	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTCTATGGAGATTT	7873	False	NA	113	True	AATAGA	-22	NA	77152877	77240913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.109	chr18	+	2791	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	-14	283	-14	181	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGACTTGAGACTTT	7885	False	NA	59	True	TATAAA	-42	NA	77152889	77241213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.11	chr18	+	1257	10	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26796	-13822	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	387.163410167902	1106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCGTGCAGTGACTTGT	6289	False	NA	NA	False	NA	NA	NA	77126107	77220811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786
ES.16910.110	chr18	+	4976	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	-6	-1910	-6	1910	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	7893	False	NA	7	True	AATAAA	-18	NA	77152897	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.111	chr18	+	1944	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-1	-128	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCTTGATTCTTTCA	7898	False	NA	15	True	AATAAA	-25	NA	77152902	77234505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.112	chr18	+	4837	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	1	-7743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	435.872602511141	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	7900	False	NA	NA	False	NA	NA	NA	77152904	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.113	chr18	+	2804	10	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	3	-9214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	536.632389059451	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTGTTTTATTATACA	7902	False	NA	NA	False	NA	NA	NA	77152906	77225419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.114	chr18	+	2253	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	3	135	combination_of_known_splicesites	FALSE	canonical	1	13	junction_1	383.573792335538	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTGTTATTTTATTTT	7902	False	NA	13	True	NA	NA	NA	77152906	77241167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.115	chr18	+	3421	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	3	-9157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	435.872602511141	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAATAATTGTGCCTA	7902	False	NA	NA	False	NA	NA	NA	77152906	77225476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.116	chr18	+	5608	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	4	-2552	4	2552	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTGTGTAGGAGAGTG	7903	False	NA	NA	False	ATTAAA	-13	NA	77152907	77244048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.118	chr18	+	2086	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	6	3484	6	-2801	5prime_fragment	FALSE	canonical	3	372	junction_1	297.608371951388	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTGGTATTTCTTAC	7905	False	NA	NA	False	ATTAAA	-22	NA	77152909	77238012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.119	chr18	+	4913	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	7	656	7	27	intron_retention	FALSE	canonical	3	372	junction_1	297.608371951388	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATAGACTAACAACAAC	7906	False	NA	40	True	AATAAA	-43	NA	77152910	77240840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.12	chr18	+	4899	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26794	-140	intron_retention	FALSE	canonical	3	101	junction_1	391.506589628096	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGATTGGAAAAGAGC	6291	False	NA	3	True	AATAAA	-13	NA	77126109	77234493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.120	chr18	+	4937	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	7	1910	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	391.59237954278	1249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	7906	False	NA	7	True	AATAAA	-18	NA	77152910	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.121	chr18	+	7054	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	15	-1182	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAATGCCTCCTCATTT	7914	False	NA	NA	False	AATATA	-19	NA	77152918	77239631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.123	chr18	+	1359	11	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	15	-137	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	441.961491535179	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATTGGAAAAGAGCTTG	7914	False	NA	6	True	AATAAA	-16	NA	77152918	77234496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.124	chr18	+	7459	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	22	-1905	-15	1905	intron_retention	FALSE	canonical	3	372	junction_1	297.608371951388	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTGAGTCTGACATT	7921	False	NA	2	True	AATAAA	-13	NA	77152925	77243401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.125	chr18	+	4902	15	NNC	ENSMUSG00000025423.17	novel	2633	15	NA	NA	-14	1704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	476.602479504028	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTTTTAAGTAAGG	7922	False	NA	5	True	AATAAA	-18	NA	77152926	77243200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77231178_77231340_77232698_77232839_77237756_77237795_77240310
ES.16910.126	chr18	+	4764	12	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-13	1908	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	399.012417213937	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTCTGACATTGAT	7923	False	NA	5	True	AATAAA	-16	NA	77152927	77243404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.127	chr18	+	4471	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-10	1910	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	470.096111626832	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	7926	False	NA	7	True	AATAAA	-18	NA	77152930	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240307
ES.16910.128	chr18	+	2034	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACTTAACTATGTAGCA	7928	False	NA	11	True	ATTAAA	-23	NA	77152932	77234625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.129	chr18	+	3366	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	34	-340	-3	340	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTTAATTTCTCAACTA	7933	False	NA	NA	False	NA	NA	NA	77152937	77241836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.13	chr18	+	5278	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26794	165	intron_retention	FALSE	canonical	3	101	junction_1	344.271016125928	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTGTAGAATTTTCT	6291	False	NA	43	True	TATAAA	-26	NA	77126109	77241197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.130	chr18	+	5209	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	35	332	-2	132	intron_retention	FALSE	canonical	3	372	junction_1	297.608371951388	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAAAGTGTTATTTTAT	7934	False	NA	10	True	NA	NA	NA	77152938	77241164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.132	chr18	+	6926	12	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	40	3528	3	-2845	intron_retention	FALSE	canonical	3	372	junction_1	283.174682530848	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTATTGCTCTTATT	7939	False	NA	NA	False	AATAAA	-18	NA	77152943	77237968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698
ES.16910.134	chr18	+	1212	9	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	42	20685	5	-13822	5prime_fragment	FALSE	canonical	3	372	junction_1	324.705539681725	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCGTGCAGTGACTTGT	7941	False	NA	NA	False	NA	NA	NA	77152945	77220811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786
ES.16910.135	chr18	+	3479	11	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	49	16017	12	-9154	5prime_fragment	FALSE	canonical	3	372	junction_1	296.828384761296	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAATTGTGCCTATTT	7948	False	NA	NA	False	NA	NA	NA	77152952	77225479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475
ES.16910.136	chr18	+	4342	12	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	27	1906	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	398.13347568725	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGAGTCTGACATTG	7963	False	NA	3	True	AATAAA	-14	NA	77152967	77243402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.137	chr18	+	4212	10	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	29	-7743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	536.632389059451	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	7965	False	NA	NA	False	NA	NA	NA	77152969	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153116_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.138	chr18	+	4775	13	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	30	2771	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTTTCGTAATG	7966	False	NA	NA	False	AATAAA	-19	NA	77152970	77237404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.139	chr18	+	1885	12	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	32	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	425.38525076717	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAAACTTAACTATGTA	7968	False	NA	8	True	ATTAAA	-20	NA	77152972	77234622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.14	chr18	+	4971	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26794	1910	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6291	False	NA	7	True	AATAAA	-18	NA	77126109	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.140	chr18	+	2678	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	70	2828	33	-2145	5prime_fragment	FALSE	canonical	3	372	junction_1	297.608371951388	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCTTGGAA	7969	False	NA	NA	False	AAGAAA	-31	NA	77152973	77238668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.142	chr18	+	4994	14	FSM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	-356	-2384	218	1701	multi-exon	FALSE	canonical	3	24	junction_1	369.279756365738	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTGTTTTTTAAGTA	8154	False	NA	2	True	AATAAA	-15	NA	77153158	77243197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.143	chr18	+	2992	14	FSM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	-353	-385	221	166	multi-exon	FALSE	canonical	3	24	junction_1	369.279756365738	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTAGAATTTTCTG	8157	False	NA	44	True	TATAAA	-27	NA	77153161	77241198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.144	chr18	+	2621	14	FSM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	-340	-27	-211	27	multi-exon	FALSE	canonical	3	24	junction_1	369.279756365738	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATAGACTAACAACAAC	8170	False	NA	40	True	AATAAA	-43	NA	77153174	77240840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.145	chr18	+	2120	13	FSM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	-180	137	-180	-137	multi-exon	FALSE	canonical	3	24	junction_1	406.688660607432	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATTGGAAAAGAGCTTG	8201	False	NA	6	True	AATAAA	-16	NA	77153205	77234496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.146	chr18	+	3564	12	NNC	ENSMUSG00000025423.17	novel	2077	13	NA	NA	-133	-9156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	492.730291839123	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATAATTGTGCCTAT	8248	False	NA	NA	False	NA	NA	NA	77153252	77225477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.147	chr18	+	4958	1	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	27258	-48903	mono-exon	FALSE	NA	NA	NA	NA	NA	1023	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGGGAGAACCTGTTCC	3687	False	NA	NA	False	NA	NA	NA	77180772	77185730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77180800_77185700
ES.16910.148	chr18	+	4758	13	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	32038	-1907	31427	1907	3prime_fragment	FALSE	canonical	3	706	junction_11	225.054607570894	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAGTCTGACATTGA	7856	False	NA	4	True	AATAAA	-15	NA	77184941	77243403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.149	chr18	+	6857	12	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	31694	38	intron_retention	FALSE	canonical	3	784	junction_11	189.552757653072	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAACTTCTGTTTAAT	8123	False	NA	51	True	ATTAAA	-23	NA	77185208	77240851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77237795_77240310
ES.16910.15	chr18	+	4545	1	Intergenic	novelGene_14089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	772	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACATAAAACACAAGT	6291	False	NA	NA	False	NA	NA	NA	77126109	77130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77126100_77130700
ES.16910.151	chr18	+	194	1	Intergenic	novelGene_14098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1046	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATTTATATACATAAAT	4688	False	NA	NA	False	NA	NA	NA	77190790	77190984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77190800_77191000
ES.16910.152	chr18	+	7171	10	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	54119	-9	intron_retention	FALSE	canonical	3	784	junction_9	207.507489080976	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCTCTGATCATAATT	NA	False	NA	NA	False	CATAAA	-8	NA	77207633	77241487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77237795_77240310
ES.16910.153	chr18	+	4039	8	ISM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	58156	129	58027	-129	3prime_fragment	FALSE	canonical	3	417	junction_7	324.070476084119	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGCTTGATTCTTTC	NA	False	NA	14	True	AATAAA	-24	NA	77211541	77234504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.154	chr18	+	6704	5	NNC	ENSMUSG00000025423.17	novel	2077	13	NA	NA	63189	-7743	intron_retention	FALSE	non_canonical	0	0	junction_4	513.51192780694	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	NA	False	NA	NA	False	NA	NA	NA	77216703	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77216758_77217745_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.155	chr18	+	4205	4	NNC	ENSMUSG00000025423.17	novel	2077	13	NA	NA	66676	-7743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	485.790764287123	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	NA	False	NA	NA	False	NA	NA	NA	77220190	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77220948_77221629_77221764_77223475_77225058_77225158
ES.16910.156	chr18	+	3429	3	NNC	ENSMUSG00000025423.17	novel	2077	13	NA	NA	68114	-7763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	517	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77221628	77226870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77221764_77223475_77225061_77225161
ES.16910.157	chr18	+	3374	5	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	68725	-1703	68114	1703	3prime_fragment	FALSE	canonical	3	706	junction_3	171	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTTTTTAAGTAAG	NA	False	NA	4	True	AATAAA	-17	NA	77221628	77243199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.158	chr18	+	3578	5	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	68725	-1907	68114	1907	3prime_fragment	FALSE	canonical	3	706	junction_3	171	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAGTCTGACATTGA	NA	False	NA	4	True	AATAAA	-15	NA	77221628	77243403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.159	chr18	+	4004	2	NNC	ENSMUSG00000025423.17	novel	2077	13	NA	NA	69271	-7743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	NA	False	NA	NA	False	NA	NA	NA	77222785	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77225061_77225161
ES.16910.16	chr18	+	3057	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26787	3	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAATTCTCATCAATATA	6298	False	NA	NA	False	CATAAA	-20	NA	77126116	77241499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.160	chr18	+	3064	2	Intergenic	novelGene_14099	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77223702	77226870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77225067_77225170
ES.16910.161	chr18	+	7694	1	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	73296	-129	mono-exon	FALSE	NA	NA	NA	NA	NA	1090	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGCTTGATTCTTTC	NA	False	NA	14	True	AATAAA	-24	NA	77226810	77234504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77226800_77234500
ES.16910.162	chr18	+	5184	2	ISM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	74362	142	74233	-142	3prime_fragment	FALSE	canonical	3	417	junction_1	0	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATGGATTGGAAAAGA	NA	False	NA	1	True	AATAAA	-11	NA	77227747	77234491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77232839_77234398
ES.16910.163	chr18	+	5397	1	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	75724	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1059	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTAGCATTTATGCTTT	NA	False	NA	21	True	ATTAAA	-33	NA	77229238	77234635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77229200_77234600
ES.16910.164	chr18	+	5569	2	ISM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	79567	-353	79567	134	3prime_fragment	FALSE	canonical	3	784	junction_1	0	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTGTTATTTTATTT	NA	False	NA	12	True	NA	NA	NA	77233081	77241166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77237795_77240310
ES.16910.165	chr18	+	7505	1	NIC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	80197	184	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTTGAGACTTTTTT	NA	False	NA	62	True	TATAAA	-45	NA	77233711	77241216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77233700_77241200
ES.16910.166	chr18	+	5870	2	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	81907	-1700	81296	1700	3prime_fragment	FALSE	canonical	3	784	junction_1	0	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGTTTTTTAAGT	NA	False	NA	1	True	AATAAA	-14	NA	77234810	77243196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77237795_77240310
ES.16910.167	chr18	+	6405	1	Genic_Genomic	ENSMUSG00000025423.17	novel	NA	NA	NA	NA	83487	1910	mono-exon	FALSE	NA	NA	NA	NA	NA	943	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	NA	False	NA	7	True	AATAAA	-18	NA	77237001	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_77237000_77243400
ES.16910.168	chr18	+	7316	1	Genic_Genomic	ENSMUSG00000025423.17	novel	NA	NA	NA	NA	86906	6240	mono-exon	FALSE	NA	NA	NA	NA	NA	898	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTGAGGAGTATC	NA	False	NA	NA	False	NA	NA	NA	77240420	77247736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_77240400_77247700
ES.16910.17	chr18	+	2725	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26783	165	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	418.260806245118	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTGTAGAATTTTCT	6302	False	NA	43	True	TATAAA	-26	NA	77126120	77241197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.18	chr18	+	5434	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26783	-2807	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	376.676732685662	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAATCAGTTGGTATT	6302	False	NA	NA	False	ATTAAA	-16	NA	77126120	77238006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.19	chr18	+	4749	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26778	1704	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTTTTAAGTAAGG	6307	False	NA	5	True	AATAAA	-18	NA	77126125	77243200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.2	chr18	+	3705	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-27131	-9214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	460.814940862622	1132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTGTTTTATTATACA	5954	False	NA	NA	False	NA	NA	NA	77125772	77225419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.20	chr18	+	3256	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26778	20	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	435.25829183629	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTTGTCGTTTAC	6307	False	NA	-62	True	NA	NA	NA	77126125	77241052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77239655
ES.16910.21	chr18	+	2385	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26778	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	432.365615550316	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAGATGTAATCACTG	6307	False	NA	22	True	AATAAA	-35	NA	77126125	77240822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237742_77237795_77240310
ES.16910.22	chr18	+	5756	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26777	37	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	370.675059857013	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAACAACTTCTGTTTAA	6308	False	NA	50	True	ATTAAA	-22	NA	77126126	77240850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398_77237795_77240310
ES.16910.23	chr18	+	3922	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26777	1867	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	376.676732685662	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCACGTGGTTGCTACAT	6308	False	NA	NA	False	AATAAA	-14	NA	77126126	77236500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.24	chr18	+	3086	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26740	188	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGACTTTTTTTTTC	6345	False	NA	66	True	NA	NA	NA	77126163	77241220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.25	chr18	+	2360	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26727	0	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTAGCATTTATGCT	6358	False	NA	19	True	ATTAAA	-31	NA	77126176	77234633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.26	chr18	+	5250	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26718	1910	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6367	False	NA	7	True	AATAAA	-18	NA	77126185	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.27	chr18	+	2893	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26716	19	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTCTCTTGTCGTTTA	6369	False	NA	-63	True	NA	NA	NA	77126187	77241051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.29	chr18	+	3109	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26710	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	367.069346752686	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTGTTATTTTATTT	6375	False	NA	12	True	NA	NA	NA	77126193	77241166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240203
ES.16910.3	chr18	+	2098	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26829	-9	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	376.676732685662	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAACTTAACTATGTAGC	6256	False	NA	10	True	ATTAAA	-22	NA	77126074	77234624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.30	chr18	+	5542	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26708	160	intron_retention	FALSE	canonical	3	706	junction_12	196.592570787629	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATACATTCTTGTAGAAT	6377	False	NA	38	True	TATAAA	-21	NA	77126195	77241192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.31	chr18	+	5214	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26708	1910	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	342.490737576133	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6377	False	NA	7	True	AATAAA	-18	NA	77126195	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.32	chr18	+	2527	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26707	63	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	366.38412280527	1252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAGGAAAAATAGAAGAA	6378	False	NA	76	True	NA	NA	NA	77126196	77240876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240492
ES.16910.34	chr18	+	3331	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26706	3	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAATTCTCATCAATATA	6379	False	NA	NA	False	CATAAA	-20	NA	77126197	77241499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.35	chr18	+	5017	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26701	1720	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	342.490737576133	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTGGTTTTCATAAAGT	6384	False	NA	21	True	AATAAA	-34	NA	77126202	77243216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.37	chr18	+	2740	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26701	100	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTCTATGGAGATTT	6384	False	NA	113	True	AATAGA	-22	NA	77126202	77240913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.38	chr18	+	3690	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26701	-9154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	380.384103395111	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAATTGTGCCTATTT	6384	False	NA	NA	False	NA	NA	NA	77126202	77225479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.39	chr18	+	2337	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26689	-2807	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	196.592570787629	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAATCAGTTGGTATT	6396	False	NA	NA	False	ATTAAA	-16	NA	77126214	77238006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.4	chr18	+	2415	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26828	29	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	418.260806245118	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAGACTAACAACAACTT	6257	False	NA	42	True	AATAAA	-45	NA	77126075	77240842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.40	chr18	+	3002	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26689	181	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	342.490737576133	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGACTTGAGACTTT	6396	False	NA	59	True	TATAAA	-42	NA	77126214	77241213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.41	chr18	+	4185	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26687	1865	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCACGTGGTTGCTAC	6398	False	NA	NA	False	AATAAA	-12	NA	77126216	77236498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.42	chr18	+	2200	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26676	-109	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAATATGTCTGCCT	6409	False	NA	34	True	AATAAA	-44	NA	77126227	77234524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.43	chr18	+	2711	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26656	94	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	365.699362412131	1253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATACTTTCTATGG	6429	False	NA	107	True	AATAGA	-16	NA	77126247	77240907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240288
ES.16910.44	chr18	+	3476	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26656	135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	450.982487555373	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTGTTATTTTATTTT	6429	False	NA	13	True	NA	NA	NA	77126247	77241167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126402_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77239655
ES.16910.45	chr18	+	3724	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26655	-124	intron_retention	FALSE	canonical	3	1027	junction_9	140.60730145743	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGATTCTTTCAAGAA	6430	False	NA	19	True	AATAAA	-29	NA	77126248	77234509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698
ES.16910.46	chr18	+	5146	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	38	intron_retention	FALSE	canonical	3	706	junction_12	196.592570787629	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAACTTCTGTTTAAT	6432	False	NA	51	True	ATTAAA	-23	NA	77126250	77240851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.47	chr18	+	5053	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26653	-7743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	380.384103395111	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTATATAGATTGAAAA	6432	False	NA	NA	False	NA	NA	NA	77126250	77226890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77225061_77225161
ES.16910.48	chr18	+	5056	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26652	2771	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTTTCGTAATG	6433	False	NA	NA	False	AATAAA	-19	NA	77126251	77237404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.49	chr18	+	2595	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	31	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	342.490737576133	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACTAACAACAACTTCT	6434	False	NA	44	True	ATTAAA	-16	NA	77126252	77240844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.5	chr18	+	2814	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26827	184	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTTGAGACTTTTTT	6258	False	NA	62	True	TATAAA	-45	NA	77126076	77241216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.50	chr18	+	7699	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1910	intron_retention	FALSE	canonical	3	706	junction_12	196.592570787629	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6434	False	NA	7	True	AATAAA	-18	NA	77126252	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.51	chr18	+	3680	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1396	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCAATAAATCTTGATG	6434	False	NA	NA	False	AATAAA	-23	NA	77126252	77236029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.52	chr18	+	4299	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1026	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCTCTGAAGGCATAC	6434	False	NA	NA	False	ATTAAA	-17	NA	77126252	77242522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.53	chr18	+	3702	2	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	772	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	6434	False	NA	NA	False	NA	NA	NA	77126252	77130626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77129073_77129744
ES.16910.54	chr18	+	3739	11	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-9156	at_least_one_novel_splicesite	FALSE	canonical	3	1027	junction_9	143.350479594594	1133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATAATTGTGCCTAT	6434	False	NA	NA	False	NA	NA	NA	77126252	77225477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475
ES.16910.57	chr18	+	3197	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	7	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_11	370.799583819813	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTCATCAATATAATTT	6434	False	NA	NA	False	CATAAA	-24	NA	77126252	77241503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232781_77232839_77237756_77237795_77240310
ES.16910.58	chr18	+	7222	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-2802	intron_retention	FALSE	canonical	3	1027	junction_9	140.60730145743	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGTTGGTATTTCTTA	6434	False	NA	NA	False	ATTAAA	-21	NA	77126252	77238011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698
ES.16910.6	chr18	+	2584	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26825	-44	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTCTTTAGGTTTTC	6260	False	NA	NA	False	AATGAA	-32	NA	77126078	77240988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.60	chr18	+	3239	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-8	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	342.490737576133	1259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTCTGATCATAATTC	6434	False	NA	NA	False	CATAAA	-9	NA	77126252	77241488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
ES.16910.61	chr18	+	3604	2	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	772	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACATAAAACACAAGT	6434	False	NA	NA	False	NA	NA	NA	77126252	77130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77128970_77129767
ES.16910.62	chr18	+	5665	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-2799	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	260.606810582959	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGGTATTTCTTACAA	6434	False	NA	NA	False	ATTAAA	-24	NA	77126252	77238014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.63	chr18	+	2579	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	380.384103395111	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTCTTGTAGAATTT	6434	False	NA	40	True	TATAAA	-23	NA	77126252	77241194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223583_77240459
ES.16910.64	chr18	+	1982	10	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	432.727125833473	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTCTAATTAAAGAT	6434	False	NA	12	True	AATAAA	-25	NA	77126252	77240812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77237756_77237795_77240310
ES.16910.65	chr18	+	2450	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_11	369.487135169217	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	6434	False	NA	13	True	AATAAA	-26	NA	77126252	77240813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77237756_77237795_77240310
ES.16910.67	chr18	+	2587	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	375.794259460928	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTCTAATTAAAGAT	6434	False	NA	12	True	AATAAA	-25	NA	77126252	77240812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223652_77232704_77232839_77237756_77237795_77240310
ES.16910.68	chr18	+	3589	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	367.069346752686	1231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAATGCCTCCTCATT	6434	False	NA	NA	False	AATATA	-18	NA	77126252	77239630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77238128
ES.16910.69	chr18	+	10062	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	38	intron_retention	FALSE	canonical	3	1027	junction_9	140.60730145743	1251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAACTTCTGTTTAAT	6434	False	NA	51	True	ATTAAA	-23	NA	77126252	77240851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698
ES.16910.7	chr18	+	5646	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26825	2554	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGTAGGAGAGTGAT	6260	False	NA	NA	False	ATTAAA	-15	NA	77126078	77244050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.70	chr18	+	4998	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1703	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	365.699362412131	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTTTTTAAGTAAG	6434	False	NA	4	True	AATAAA	-17	NA	77126252	77243199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240288
ES.16910.71	chr18	+	3732	2	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	772	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACATAAAACACAAGT	6434	False	NA	NA	False	NA	NA	NA	77126252	77130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77129060_77129729
ES.16910.72	chr18	+	5079	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1806	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTTTTTTCTTGG	6434	False	NA	-97	True	AAGAAA	-18	NA	77126252	77243302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.74	chr18	+	3215	2	Antisense	novelGene_ENSMUSG00000025420.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	772	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACATAAAACACAAGT	6434	False	NA	NA	False	NA	NA	NA	77126252	77130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77128584_77129770
ES.16910.77	chr18	+	2915	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26641	165	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	366.612479410033	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTGTAGAATTTTCT	6444	False	NA	43	True	TATAAA	-26	NA	77126262	77241197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237799_77240363
ES.16910.78	chr18	+	3310	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26641	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	366.38412280527	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCATAATTCTCATCAAT	6444	False	NA	NA	False	CATAAA	-17	NA	77126262	77241496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240263
ES.16910.79	chr18	+	3386	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26641	1701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	367.069346752686	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTGTTTTTTAAGTA	6444	False	NA	2	True	AATAAA	-15	NA	77126262	77243197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77241888
ES.16910.80	chr18	+	5195	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26641	1910	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	365.699362412131	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6444	False	NA	7	True	AATAAA	-18	NA	77126262	77243406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240288
ES.16910.81	chr18	+	2626	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26640	96	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	366.612479410033	1253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATACTTTCTATGGAG	6445	False	NA	109	True	AATAGA	-18	NA	77126263	77240909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237799_77240363
ES.16910.82	chr18	+	4499	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	1908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	374.482791255814	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTCTGACATTGAT	6446	False	NA	5	True	AATAAA	-16	NA	77126264	77243404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126327_77185263_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.83	chr18	+	6321	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	166	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	269.397486842694	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTAGAATTTTCTG	6446	False	NA	44	True	TATAAA	-27	NA	77126264	77241198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398_77237795_77240310
ES.16910.84	chr18	+	1571	11	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	441.961491535179	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGGATTGGAAAAGAG	6446	False	NA	2	True	AATAAA	-12	NA	77126264	77234492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.85	chr18	+	2588	5	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	-25318	at_least_one_novel_splicesite	FALSE	canonical	3	1189	junction_1	29.5920175047258	1089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGCTGTCTTTTCTTG	6446	False	NA	NA	False	NA	NA	NA	77126264	77209315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751
ES.16910.86	chr18	+	8527	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	1908	at_least_one_novel_splicesite	FALSE	canonical	3	417	junction_12	269.397486842694	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTCTGACATTGAT	6446	False	NA	5	True	AATAAA	-16	NA	77126264	77243404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398_77237795_77240310
ES.16910.88	chr18	+	1443	8	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	-16801	at_least_one_novel_splicesite	FALSE	canonical	3	1189	junction_1	105.858395982558	1102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCGTTCAGGCCAGCTT	6446	False	NA	NA	False	AGTAAA	-5	NA	77126264	77217832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745
ES.16910.89	chr18	+	3032	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26639	188	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	366.38412280527	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGACTTTTTTTTTC	6446	False	NA	66	True	NA	NA	NA	77126264	77241220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240263
ES.16910.9	chr18	+	5577	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26798	-4	intron_retention	FALSE	canonical	3	101	junction_1	344.271016125928	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGATCATAATTCTCAT	6287	False	NA	NA	False	CATAAA	-13	NA	77126105	77241492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756
ES.16910.90	chr18	+	4484	13	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26635	1701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	475.319249440719	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTGTTTTTTAAGTA	6450	False	NA	2	True	AATAAA	-15	NA	77126268	77243197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223649_77232698_77232839_77237756_77237795_77240310
ES.16910.91	chr18	+	1677	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26628	-109	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	419.306590132955	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAATATGTCTGCCT	6457	False	NA	34	True	AATAAA	-44	NA	77126275	77234524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ES.16910.93	chr18	+	5798	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26616	2560	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGAGAGTGATTTTTAG	6469	False	NA	NA	False	ATTAAA	-21	NA	77126287	77244056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.94	chr18	+	4962	12	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26616	1904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	365.060914197042	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTTGAGTCTGACAT	6469	False	NA	1	True	AATAAA	-12	NA	77126287	77243400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.95	chr18	+	4895	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26569	1704	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTTTTAAGTAAGG	6516	False	NA	5	True	AATAAA	-18	NA	77126334	77243200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.96	chr18	+	2735	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26569	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	452.200763613071	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTTTCTATGGAGAT	6516	False	NA	111	True	AATAGA	-20	NA	77126334	77240911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77167164_77167294_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ES.16910.97	chr18	+	4642	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26497	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	462.003379261429	1250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGATGTAATCACT	6588	False	NA	21	True	AATAAA	-34	NA	77126406	77240821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217747_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398_77236599_77237756_77237795_77240310
ES.16910.98	chr18	+	3441	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26497	131	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	366.155817706392	1257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATAAAGTGTTATTTTA	6588	False	NA	9	True	NA	NA	NA	77126406	77241163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77239655
ES.16911.1	chr18	-	3216	18	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14044	1115	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.12744506728894	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCCTATGTATGTATAA	NA	False	NA	NA	False	ATTAAA	-14	NA	77120895	77063728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77064606_77064659_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77110249_77110462_77120759
ES.16911.10	chr18	-	186	1	Intergenic	novelGene_14090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGGAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	77129189	77129003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77129000_77129200
ES.16911.11	chr18	-	3605	1	NIC	ENSMUSG00000025420.14	novel	2039	17	NA	NA	894	-32212	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTATAATACCAGCCCC	NA	False	NA	NA	False	NA	NA	NA	77134045	77130440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77130400_77134000
ES.16911.2	chr18	-	3492	15	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14003	42	intron_retention	FALSE	canonical	2	2	junction_2	8.2477578895165	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATGTTTTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	77120936	77064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77065222_77066125_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
ES.16911.3	chr18	-	1894	16	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14087	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	8.24459418851731	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTCTCCTCATTT	NA	False	NA	NA	False	TATAAA	-15	NA	77120852	77064843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
ES.16911.4	chr18	-	1943	16	NNC	ENSMUSG00000025420.14	novel	1942	16	NA	NA	14044	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	8.22732574345327	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTCTCCTCATTT	NA	False	NA	NA	False	TATAAA	-15	NA	77120895	77064843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
ES.16911.5	chr18	-	3616	16	NNC	ENSMUSG00000025420.14	novel	2003	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	7.05659659861293	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTCTCCTCATTT	NA	False	NA	NA	False	TATAAA	-15	NA	77134991	77064843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77065222_77066125_77066369_77067694_77067858_77082089_77082201_77085307_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77102802_77102953_77103697_77105324_77106880_77106952_77134869
ES.16911.6	chr18	-	175	1	Intergenic	novelGene_14083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	77079971	77079796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77079800_77080000
ES.16911.7	chr18	-	2464	1	Intergenic	novelGene_14084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTCAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77088761	77086297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77086300_77088800
ES.16911.8	chr18	-	1558	6	NNC	ENSMUSG00000025420.14	novel	1674	14	NA	NA	14026	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	3.26190128606002	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTATTTCTGCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77120913	77097739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77098742_77099679_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
ES.16911.9	chr18	-	185	1	Intergenic	novelGene_14087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	77118466	77118281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77118300_77118500
ES.16912.1	chr18	-	5023	1	Intergenic	novelGene_14092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTATTTGGGGCTTACAG	NA	False	NA	NA	False	NA	NA	NA	77150116	77145093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77145100_77150100
ES.16913.1	chr18	-	173	1	Intergenic	novelGene_14093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77168039	77167866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77167900_77168000
ES.16914.1	chr18	-	1765	1	Intergenic	novelGene_14094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCCCTGTAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	77171130	77169365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77169400_77171100
ES.16914.2	chr18	-	207	1	Intergenic	novelGene_14095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACTATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	77171057	77170850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77170800_77171100
ES.16915.1	chr18	-	156	1	Intergenic	novelGene_14096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	77172065	77171909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77171900_77172100
ES.16916.1	chr18	-	176	1	Intergenic	novelGene_14097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77187058	77186882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77186900_77187100
ES.16917.1	chr18	-	3651	1	Antisense	novelGene_ENSMUSG00000025423.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGTTAATAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	77217405	77213754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_77213800_77217400
ES.16917.2	chr18	-	1686	2	Antisense	novelGene_ENSMUSG00000025423.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGTTAATAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	77217404	77213754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_77214686_77216649
ES.16918.1	chr18	-	988	1	Antisense	novelGene_ENSMUSG00000025423.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTCACATTGGTAGC	NA	False	NA	NA	False	NA	NA	NA	77220809	77219821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_77219800_77220800
ES.16919.1	chr18	-	724	1	Intergenic	novelGene_14100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATTGAAAGGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	77232679	77231955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77232000_77232700
ES.1692.1	chr1	+	2947	2	Antisense	novelGene_ENSMUSG00000070565.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTTGTTTTAAGAACA	NA	False	NA	NA	False	NA	NA	NA	156967154	156970280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_156970039_156970217
ES.16920.1	chr18	+	4631	1	Intergenic	novelGene_14101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTGTGTGTTCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	77249604	77254235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77249600_77254200
ES.16920.2	chr18	+	3352	2	Intergenic	novelGene_14102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTAATCAAAATTA	NA	False	NA	NA	False	NA	NA	NA	77251644	77255194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77254634_77254831
ES.16921.1	chr18	-	209	1	Intergenic	novelGene_14103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGTCTATAATCCTAT	5958	False	NA	NA	False	NA	NA	NA	77456234	77456025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77456000_77456200
ES.16922.1	chr18	+	177	1	Intergenic	novelGene_14104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTAAATTTGGA	NA	False	NA	NA	False	NA	NA	NA	77663931	77664108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77663900_77664100
ES.16922.2	chr18	+	175	2	Intergenic	novelGene_14105	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77663931	77787871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77664025_77787789
ES.16922.3	chr18	+	317	2	Intergenic	novelGene_14106	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77663932	77788014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77663981_77787745
ES.16922.4	chr18	+	176	1	Intergenic	novelGene_14107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	77666734	77666910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77666700_77666900
ES.16922.5	chr18	+	1153	1	Antisense	novelGene_ENSMUSG00000047466.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAACAAAAAAAAAAAAAAAA	4481	False	NA	NA	False	GGGGCT	-15	NA	77718683	77719836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77718700_77719800
ES.16922.6	chr18	+	157	1	Intergenic	novelGene_14114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77766407	77766564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77766400_77766600
ES.16922.7	chr18	+	2045	1	Intergenic	novelGene_14115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	77773144	77775189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77773100_77775200
ES.16922.8	chr18	+	178	1	Intergenic	novelGene_14116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5846	False	NA	NA	False	NA	NA	NA	77787695	77787873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77787700_77787900
ES.16923.1	chr18	+	243	1	Intergenic	novelGene_14118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCACTTGAGTGAGC	5414	False	NA	NA	False	NA	NA	NA	77805606	77805849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77805600_77805800
ES.16924.1	chr18	+	157	1	Intergenic	novelGene_14119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	6077	False	NA	NA	False	NA	NA	NA	77806269	77806426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77806300_77806400
ES.16925.1	chr18	-	5370	9	NNC	ENSMUSG00000025427.16	novel	7300	8	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0389933870802	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGGAGTGCAGAGTGTT	NA	False	NA	0	True	AATAAA	-24	NA	77652992	77543805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77547783_77549872_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
ES.16925.2	chr18	-	5478	1	ISM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	103546	3	5558	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTCAGGAGTGCAGAGT	NA	False	NA	-3	True	AATAAA	-21	NA	77549286	77543808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_77543800_77549300
ES.16925.3	chr18	-	5114	8	NIC	ENSMUSG00000025427.16	novel	7300	8	NA	NA	51	337	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	11.7924223334223	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCCAAACTATCAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	77592763	77546043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77592616
ES.16925.4	chr18	-	1994	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	-256	5562	-231	1221	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGGTGAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	77653088	77549367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
ES.16925.5	chr18	-	1907	9	NNC	ENSMUSG00000025427.16	novel	7300	8	NA	NA	-12372	1212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.6450540489952	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAATCAAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	77665229	77549376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77660122_77660297_77665130
ES.16926.1	chr18	-	184	1	Intergenic	novelGene_14108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAGAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	77693002	77692818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77692800_77693000
ES.16927.1	chr18	-	181	1	Intergenic	novelGene_14109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	77700018	77699837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77699800_77700000
ES.16928.1	chr18	-	5117	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-88	22	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTCCTGTCTCAGT	NA	False	NA	14	True	AATAAA	-37	NA	77801771	77719170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
ES.16928.10	chr18	-	4937	4	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-10	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	82.4472895585753	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTCTGAGAATGTTT	NA	False	NA	-1	True	AATAAA	-22	NA	77801643	77719185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730763_77730891_77761595_77762344_77801420
ES.16928.11	chr18	-	4396	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	82.8747381427068	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	-2	True	AATAAA	-21	NA	77801683	77719186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77740824_77740993_77801420
ES.16928.12	chr18	-	5159	7	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-7626	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.0748598998847	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	-2	True	AATAAA	-21	NA	77809812	77719186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730748_77730891_77740824_77740993_77761595_77762381_77803342_77803410_77804851_77804975_77809776
ES.16928.13	chr18	-	5136	6	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-18	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	76.1682348489185	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTCTGAGAATGTT	NA	False	NA	-2	True	AATAAA	-21	NA	77801701	77719186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420_77801448_77801510
ES.16928.14	chr18	-	4236	3	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-9	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	96.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTTTCTGAGAATGT	NA	False	NA	-3	True	AATAAA	-20	NA	77801692	77719187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77801420
ES.16928.15	chr18	-	5058	5	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.0604543973052	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTTTCTGAGAATGT	NA	False	NA	-3	True	AATAAA	-20	NA	77801653	77719187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730418_77730532_77730763_77730891_77761595_77762344_77801420
ES.16928.16	chr18	-	4315	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_3	82.8747381427068	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTCTTTCTGAGAATG	NA	False	NA	-4	True	AATAAA	-19	NA	77802186	77719188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77740824_77740993_77802002
ES.16928.17	chr18	-	5152	7	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-7618	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	67.0240421208854	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTCTTTCTGAGAAT	NA	False	NA	-5	True	AATAAA	-18	NA	77809804	77719189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77803342_77803410_77804851_77804975_77809757
ES.16928.18	chr18	-	5342	3	ISM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	59429	-3	59429	3	3prime_fragment	FALSE	canonical	3	42	junction_2	75.5	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTCTTTCTGAGAAT	NA	False	NA	-5	True	AATAAA	-18	NA	77742204	77719189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_77723025_77730763_77730891_77740824
ES.16928.2	chr18	-	5278	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-144	-9	-94	9	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTGAGAATGTTTTC	NA	False	NA	1	True	AATAAA	-24	NA	77801777	77719183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.21	chr18	-	4891	3	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	79.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGACTCTTTCTGAG	NA	False	NA	-8	True	AATAAA	-15	NA	77801694	77719192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77761595_77762381_77801420
ES.16928.22	chr18	-	4424	4	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	164	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	82.4472895585753	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGACTCTTTCTGAG	NA	False	NA	-8	True	AATAAA	-15	NA	77801469	77719192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730763_77730891_77761595_77762012_77801420
ES.16928.23	chr18	-	4747	3	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	53	-1	intron_retention	FALSE	canonical	1	11	junction_1	11.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTGACTCTTTCTGA	NA	False	NA	-9	True	AATAAA	-14	NA	77802133	77719193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77761595_77762381_77802002
ES.16928.24	chr18	-	4821	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-58	362	-8	-362	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTGCTCTTCTTACC	NA	False	NA	NA	False	TTTAAA	-18	NA	77801691	77719554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.25	chr18	-	4515	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-10	-502	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGTATTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	77801693	77719694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
ES.16928.26	chr18	-	4327	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-9	-639	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCGAGCCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	77801642	77719831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
ES.16928.27	chr18	-	4542	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-56	639	-6	-639	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCGAGCCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	77801689	77719831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.28	chr18	-	3487	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-141	1779	-91	1711	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATTTCTGGTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	77801774	77720971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.29	chr18	-	3145	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	1	1708	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAATTTCTGGTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	77802185	77720974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
ES.16928.3	chr18	-	5299	6	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.7949879169393	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTGAGAATGTTTTC	NA	False	NA	1	True	AATAAA	-24	NA	77801683	77719183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730763_77730891_77740824_77740993_77742831_77742947_77761595_77762381_77801420
ES.16928.30	chr18	-	3233	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-10	1706	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACATAATTTCTGGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	77801693	77720976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
ES.16928.31	chr18	-	1520	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTTAGCACAGAGA	NA	False	NA	-7	True	ATTAAA	-15	NA	77801686	77722682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
ES.16928.32	chr18	-	1666	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	-32	3491	18	-1	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAACTTAGCACAGAG	NA	False	NA	-8	True	ATTAAA	-14	NA	77801665	77722683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.34	chr18	-	225	1	Intergenic	novelGene_14110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATGTTTGGGGTGGGG	6785	False	NA	NA	False	AATAAA	-24	NA	77725946	77725721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77725700_77725900
ES.16928.35	chr18	-	1246	3	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	15	-7995	combination_of_known_splicesites	FALSE	canonical	3	148	junction_1	11	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTGCAGCTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	77801668	77730677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77730891_77761595_77762381_77801420
ES.16928.36	chr18	-	136	1	Intergenic	novelGene_14111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAATAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	77736440	77736304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77736300_77736400
ES.16928.37	chr18	-	6819	1	Intergenic	novelGene_14112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGTTACTCTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	77753379	77746560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77746600_77753400
ES.16928.38	chr18	-	3964	2	FSM	ENSMUSG00000047466.11	ENSMUST00000235641.2	2571	2	19	-1412	19	1412	multi-exon	FALSE	canonical	3	170	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCATCCGTATCCACC	NA	False	NA	NA	False	ATTAAA	-22	NA	77801664	77758660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77762381_77801420
ES.16928.39	chr18	-	1376	1	Genic_Genomic	ENSMUSG00000047466.11	novel	NA	NA	NA	NA	41148	963	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGCTGCTTAATATTG	7293	False	NA	NA	False	AAAAAG	-11	NA	77760485	77759109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_77759100_77760500
ES.16928.4	chr18	-	5298	6	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	59.8885631819632	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCTGAGAATGTTTT	NA	False	NA	0	True	AATAAA	-23	NA	77801685	77719184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730418_77730532_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ES.16928.40	chr18	-	1442	2	ISM	ENSMUSG00000047466.11	ENSMUST00000237203.2	1606	5	0	38440	0	-1050	5prime_fragment	FALSE	canonical	3	34	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTGTTTTGTTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	77802186	77761122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_77762381_77802002
ES.16928.41	chr18	-	178	1	Intergenic	novelGene_14113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAACCAAACAAA	2145	False	NA	NA	False	NA	NA	NA	77765633	77765455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77765500_77765600
ES.16928.42	chr18	-	216	1	Intergenic	novelGene_14117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTTTTTACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	77798214	77797998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77798000_77798200
ES.16928.43	chr18	-	2420	2	Antisense	novelGene_ENSMUSG00000056682.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	77809801	77802598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_77804975_77809757
ES.16928.5	chr18	-	5114	5	FSM	ENSMUSG00000047466.11	ENSMUST00000237203.2	1606	5	-10	-3498	-10	8	multi-exon	FALSE	canonical	3	34	junction_4	65.6291665343999	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCTGAGAATGTTTT	NA	False	NA	0	True	AATAAA	-23	NA	77802196	77719184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77802002
ES.16928.6	chr18	-	5109	5	NNC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	19	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	76.0608309184169	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCTGAGAATGTTTT	NA	False	NA	0	True	AATAAA	-23	NA	77801664	77719184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77723025_77730418_77730532_77730763_77730891_77761595_77762381_77801420
ES.16928.7	chr18	-	4955	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	-19	8	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCTGAGAATGTTTT	NA	False	NA	0	True	AATAAA	-23	NA	77802205	77719184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
ES.16928.9	chr18	-	4647	1	Genic_Genomic	ENSMUSG00000047466.11	novel	NA	NA	NA	NA	77801	7	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTTCTGAGAATGTTT	8899	False	NA	-1	True	AATAAA	-22	NA	77723832	77719185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_77719200_77723800
ES.16929.1	chr18	-	273	1	Intergenic	novelGene_14120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTGAGGGAGGTGGA	NA	False	NA	NA	False	AATAAA	-11	NA	77811477	77811204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77811200_77811500
ES.16929.2	chr18	-	159	1	Intergenic	novelGene_14121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77811476	77811317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77811300_77811500
ES.1693.1	chr1	+	226	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAATCATGAAGGCAAACA	NA	False	NA	NA	False	AAAAAG	-29	NA	157052864	157053090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_157052900_157053100
ES.16930.1	chr18	-	176	1	Intergenic	novelGene_14122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	77815605	77815429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77815400_77815600
ES.16931.1	chr18	-	1267	2	FSM	ENSMUSG00000097666.3	ENSMUST00000180530.3	1269	2	5	-3	5	3	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATTCTTCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	77820434	77817192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77818179_77820153
ES.16932.1	chr18	+	335	1	Intergenic	novelGene_14123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAAAAAAAAAAT	1079	False	NA	NA	False	NA	NA	NA	77826469	77826804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77826500_77826800
ES.16932.2	chr18	+	178	1	Intergenic	novelGene_14124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGAACTAATGG	1080	False	NA	NA	False	NA	NA	NA	77826470	77826648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77826500_77826600
ES.16933.1	chr18	+	1685	1	Intergenic	novelGene_14125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAAAAAGTTGAACT	2650	False	NA	NA	False	NA	NA	NA	77837834	77839519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77837800_77839500
ES.16934.1	chr18	-	177	1	Intergenic	novelGene_14126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	77839233	77839056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77839100_77839200
ES.16935.1	chr18	+	3717	5	Antisense	novelGene_ENSMUSG00000041840.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGGCTCATTGAGC	NA	False	NA	NA	False	NA	NA	NA	77845381	77851111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_77845431_77846199_77846592_77846744_77847008_77847761_77847799_77848135
ES.16936.1	chr18	-	2192	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	-11	1382	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	423.686583440701	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGGTGGTACACGCCTT	NA	False	NA	NA	False	NA	NA	NA	77855497	77843884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77844964_77845174_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.10	chr18	-	1208	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	538.785625845089	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855473	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77852241_77852454_77854563_77854739_77855419
ES.16936.11	chr18	-	1365	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	1190	junction_5	92.9252497484743	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855469	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.12	chr18	-	3218	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	556.2817266233	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855467	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77852241_77854645_77855419
ES.16936.13	chr18	-	2312	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	1190	junction_4	90.0729642505946	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855465	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.14	chr18	-	1050	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	444.252673036415	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855497	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848761_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.15	chr18	-	850	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_6	465.485219739487	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855463	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77854563_77854739_77855419
ES.16936.16	chr18	-	5048	6	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	554.590515605884	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855484	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846587_77846744_77847209_77848167_77851909_77854563_77854739_77855419
ES.16936.17	chr18	-	2126	6	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	26	0	intron_retention	TRUE	canonical	3	42	junction_5	518.522670671206	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855454	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77855419
ES.16936.18	chr18	-	1947	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	1190	junction_5	84.227582859095	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855473	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.19	chr18	-	3711	7	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	-7	0	intron_retention	TRUE	non_canonical	0	0	junction_1	620.806308136622	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855493	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845992_77846097_77846587_77846744_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.2	chr18	-	1632	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	13	852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	423.686583440701	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGTTGATAGAAGCTC	NA	False	NA	NA	False	NA	NA	NA	77855467	77844414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77844964_77845174_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.20	chr18	-	3318	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	425.6675455975	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTGTTATCTGTTG	NA	False	NA	-3	True	AATACA	-17	NA	77855475	77845269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77852241_77854739_77855419
ES.16936.21	chr18	-	1910	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	5	-6	intron_retention	FALSE	canonical	3	1190	junction_5	93.7560882376854	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCATTTCTTGTTATC	NA	False	NA	-8	True	AATACA	-12	NA	77855475	77845274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.22	chr18	-	2948	8	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	4	-6	intron_retention	FALSE	canonical	3	1215	junction_5	78.2356461373626	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCATTTCTTGTTATC	NA	False	NA	-8	True	AATACA	-12	NA	77855476	77845274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77851909_77854563_77854739_77855419
ES.16936.23	chr18	-	1124	11	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	592.184000121584	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCATTTCTTGTTATC	NA	False	NA	-8	True	AATACA	-12	NA	77855469	77845274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77852241_77852454_77854563_77854645_77854717_77854739_77855419
ES.16936.25	chr18	-	884	9	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	436.353569367778	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGGCATTTCTTGTTA	NA	False	NA	-10	True	AATACA	-10	NA	77855464	77845276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854645_77855419
ES.16936.26	chr18	-	1729	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	11	-38	intron_retention	FALSE	canonical	3	42	junction_6	486.558121456785	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTGGCCTGAATAC	NA	False	NA	-40	True	AGTAAA	-25	NA	77855469	77845306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77849817_77851772_77851909_77855419
ES.16936.27	chr18	-	2640	7	NNC	ENSMUSG00000041840.9	novel	6882	3	NA	NA	16	-280	intron_retention	FALSE	non_canonical	0	0	junction_1	491.12843420931	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTCTTTCTCTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	77855464	77845548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845992_77846097_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.28	chr18	-	1344	9	NNC	ENSMUSG00000041840.9	novel	6882	3	NA	NA	-6	-280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	435.926312580464	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTCTTTCTCTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	77855492	77845548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845992_77846097_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.29	chr18	-	831	7	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	5	1802	5	-1801	5prime_fragment	FALSE	canonical	3	1190	junction_4	80.3720515270493	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTGGGTTTGTGTTC	NA	False	NA	NA	False	ACTAAA	-6	NA	77855475	77847069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.3	chr18	-	1571	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	5	780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	423.686583440701	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	77855475	77844486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77844971_77845178_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.30	chr18	-	370	3	FSM	ENSMUSG00000041840.9	ENSMUST00000236575.2	6882	3	10	6502	4	-6502	multi-exon	FALSE	canonical	3	1297	junction_2	61	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTGTGATGGTTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	77855476	77851770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77851909_77854563_77854739_77855419
ES.16936.5	chr18	-	1299	10	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	17	523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	423.686583440701	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATGAATCCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	77855463	77844743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77844964_77845174_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16936.6	chr18	-	178	1	Intergenic	novelGene_14127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77845173	77844995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77845000_77845200
ES.16936.7	chr18	-	740	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_4	503.669672393414	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855475	77845266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77851772_77851909_77854563_77854739_77855419
ES.16936.8	chr18	-	4058	7	NNC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	511.064058824549	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	False	NA	0	True	AATACA	-20	NA	77855475	77845266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77850746_77850966_77851909_77854563_77854739_77855419
ES.16936.9	chr18	-	1037	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	-34	0	-28	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855514	77845267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ES.16937.1	chr18	+	2506	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	-35	0	-35	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861393	77870569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.10	chr18	+	1689	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	-2	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1586.70890746375	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTAGTTTGTGTGGGGG	NA	False	NA	25	True	AATAAA	-13	NA	77861689	77870210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863518_77865342_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.11	chr18	+	1851	13	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	-2	40498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1528.71620749423	2340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTGTGAAGCAGACTG	NA	False	NA	NA	False	AGTAAA	-13	NA	77861689	77911067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000_77870193_77911049
ES.16937.12	chr18	+	2190	12	NNC	ENSMUSG00000025428.16	novel	2674	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1577.23641037572	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861689	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861794_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.13	chr18	+	1840	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	-1	-147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1584.86061644352	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTAGTTTGTGTGGG	NA	False	NA	23	True	AATAAA	-11	NA	77861690	77870208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867668_77867775_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.18	chr18	+	1287	9	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	5	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1808.96440937211	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATACTGTGTGCTAGTTT	NA	False	NA	16	True	AATAAA	-4	NA	77861696	77870201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867609_77869498_77869650_77870000
ES.16937.19	chr18	+	1805	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	5	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1577.23641037572	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTAGTTTGTGTGGGGGTG	NA	False	NA	27	True	AATAAA	-15	NA	77861696	77870212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863517_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.2	chr18	+	2123	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	-1	349	-1	-135	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGGGTGGGCTCAGG	NA	False	NA	35	True	AATAAA	-23	NA	77861427	77870220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.20	chr18	+	3672	9	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	5	0	intron_retention	FALSE	canonical	3	5078	junction_3	225.503187338893	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861696	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77866336_77866431_77866599_77866778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.22	chr18	+	1793	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	5	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1596.2734598676	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTAGTTTGTGTGGGGG	NA	False	NA	25	True	AATAAA	-13	NA	77861696	77870210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866877_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.25	chr18	+	2723	9	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-139	intron_retention	FALSE	canonical	3	5332	junction_5	157.174067517514	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGTGGGGGTGGGCT	NA	False	NA	31	True	AATAAA	-19	NA	77861698	77870216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.26	chr18	+	1830	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-257	intron_retention	FALSE	canonical	3	5078	junction_4	229.168518780394	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATACTGCTTTGGTTTT	NA	False	NA	10	True	CATAAA	-16	NA	77861698	77870098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.27	chr18	+	2191	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2126.42494761777	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTGTCTTGGTTGATG	NA	False	NA	16	True	ATTAAA	-18	NA	77861698	77870565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866777_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868918_77869057_77869498_77869650_77870000
ES.16937.28	chr18	+	1835	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1596.2734598676	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTAGTTTGTGTGGGGG	NA	False	NA	25	True	AATAAA	-13	NA	77861698	77870210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866921_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.3	chr18	+	1099	1	Genic_Genomic	ENSMUSG00000025428.16	novel	NA	NA	NA	NA	-1	-6273	mono-exon	FALSE	NA	NA	NA	NA	NA	2008	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTTTGAATCCTTTA	NA	False	NA	NA	False	NA	NA	NA	77861427	77862526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_77861400_77862500
ES.16937.30	chr18	+	2157	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1584.86061644352	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861698	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867638_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.32	chr18	+	2978	10	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	5136	junction_5	194.680428229965	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861698	77870569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866599_77866778_77866928_77867526_77867679_77867778_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.34	chr18	+	1961	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-145	intron_retention	FALSE	canonical	3	5078	junction_4	235.207589163275	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTAGTTTGTGTGGGGG	NA	False	NA	25	True	AATAAA	-13	NA	77861698	77870210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77869057_77869498_77869650_77870000
ES.16937.35	chr18	+	1940	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-147	intron_retention	FALSE	canonical	3	5078	junction_4	229.168518780394	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTAGTTTGTGTGGG	NA	False	NA	23	True	AATAAA	-11	NA	77861698	77870208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.36	chr18	+	2797	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	5078	junction_4	206.36911106074	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861698	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.37	chr18	+	1833	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	7	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1577.23641037572	2277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTTTGTGTGGGGGT	NA	False	NA	26	True	AATAAA	-14	NA	77861698	77870211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861801_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.39	chr18	+	1822	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	11	-257	intron_retention	FALSE	canonical	3	5136	junction_5	194.618318767787	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATACTGCTTTGGTTTT	NA	False	NA	10	True	CATAAA	-16	NA	77861702	77870098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.4	chr18	+	1778	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	228	465	1	-251	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTGGTTTTGTCATT	NA	False	NA	16	True	CATAAA	-22	NA	77861656	77870104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.40	chr18	+	1724	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	11	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2119.51118253539	2270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACTGCTTTGGTTTTGT	NA	False	NA	12	True	CATAAA	-18	NA	77861702	77870100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861805_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867524_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.42	chr18	+	2185	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1591.63815502423	2286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861702	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866787_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.43	chr18	+	3473	10	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	5078	junction_4	208.315702957711	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861703	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77867679_77867778_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.44	chr18	+	2164	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1584.86061644352	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861719	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867638_77867750_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.45	chr18	+	2854	11	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	30	-2	intron_retention	FALSE	canonical	3	5078	junction_4	230.293312972826	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGTCTTGGTTGAT	NA	False	NA	15	True	ATTAAA	-17	NA	77861721	77870564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.47	chr18	+	2781	12	NNC	ENSMUSG00000025428.16	novel	2674	12	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_1	1568.39547424633	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77861930	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77862626_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.48	chr18	+	6368	6	NIC	ENSMUSG00000025428.16	novel	2674	12	NA	NA	426	0	intron_retention	FALSE	canonical	3	5078	junction_2	155.104351969892	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	False	NA	17	True	ATTAAA	-19	NA	77862117	77870566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77865389_77866161_77866336_77866431_77866599_77866778_77868004_77868684_77869650_77870000
ES.16937.49	chr18	+	1621	11	ISM	ENSMUSG00000025428.16	ENSMUST00000114748.2	2674	12	1820	466	1784	-255	3prime_fragment	FALSE	canonical	3	5078	junction_3	207.718078173278	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACTGCTTTGGTTTTGT	NA	False	NA	12	True	CATAAA	-18	NA	77863475	77870100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.51	chr18	+	1833	9	ISM	ENSMUSG00000025428.16	ENSMUST00000114748.2	2674	12	4504	6	-495	-6	3prime_fragment	FALSE	canonical	3	5078	junction_1	222.523278276678	2280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGAAATGTGTCTTGGT	NA	False	NA	11	True	ATTAAA	-13	NA	77866159	77870560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.52	chr18	+	1373	9	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	-494	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1791.86613182319	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACTGCTTTGGTTTTGT	NA	False	NA	12	True	CATAAA	-18	NA	77866160	77870100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77866336_77866431_77866599_77866778_77866928_77867526_77867680_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16937.53	chr18	+	2729	2	ISM	ENSMUSG00000025428.16	ENSMUST00000135678.2	774	5	5331	253	368	-253	3prime_fragment	FALSE	canonical	3	5438	junction_1	0	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTTTGGTTTTGTCA	NA	False	NA	14	True	CATAAA	-20	NA	77867022	77870102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77869650_77870000
ES.16937.54	chr18	+	215	1	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	2466	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	2268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTAGTTTGTGTGGGGGTG	NA	False	NA	27	True	AATAAA	-15	NA	77869997	77870212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77870000_77870200
ES.16937.55	chr18	+	3299	5	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	2	-81565	intron_retention	FALSE	canonical	0	0	junction_1	9.44391338376205	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATATGGTGATCGGTAC	2212	False	NA	NA	False	ATTAAA	-9	NA	77877615	77885551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77881229_77881341_77882004_77882171_77882305_77882451_77882745
ES.16937.56	chr18	+	2158	4	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	2	-82595	intron_retention	FALSE	canonical	1	3	junction_1	9.93310961716756	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATGGGAAGTGCTC	2212	False	NA	NA	False	AATAAA	-15	NA	77877615	77884521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77882745
ES.16937.57	chr18	+	173	1	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	5	-89325	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGCATTAAGAGTATT	2215	False	NA	NA	False	NA	NA	NA	77877618	77877791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77877600_77877800
ES.16937.58	chr18	+	3008	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	5	879	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTATTCTTGTGTT	2215	False	NA	NA	False	AATAAA	-21	NA	77877618	77971458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.59	chr18	+	1308	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	5	-821	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAGGTTGTGAGTGTTG	2215	False	NA	NA	False	NA	NA	NA	77877618	77969758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.60	chr18	+	3318	17	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	5	878	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.3493659226061	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2215	False	NA	NA	False	AATAAA	-20	NA	77877618	77971457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.61	chr18	+	3328	17	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	5	875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.8884614960058	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGTATTCTTG	2215	False	NA	NA	False	AATAAA	-17	NA	77877618	77971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77881991_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.63	chr18	+	3032	14	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	16	881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.5881507165087	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTATTCTTGTGTTAG	2226	False	NA	NA	False	AATAAA	-23	NA	77877629	77971460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77965294_77965330_77967055_77967117_77969501
ES.16937.64	chr18	+	1890	7	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	16	-29216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.5255294853706	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGTAATTTTTAT	2226	False	NA	NA	False	NA	NA	NA	77877629	77937900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77936592
ES.16937.65	chr18	+	3487	19	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	17	875	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.660793679381	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGTATTCTTG	2227	False	NA	NA	False	AATAAA	-17	NA	77877630	77971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877697_77880509_77880573_77881229_77881341_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.66	chr18	+	1469	6	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	18	-42062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1311401135312	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	2228	False	NA	NA	False	NA	NA	NA	77877631	77925054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77881229_77881341_77882004_77882171_77882305_77882451_77922824_77922926_77924163
ES.16937.67	chr18	+	3428	18	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	22	878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.0836186976605	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2232	False	NA	NA	False	AATAAA	-20	NA	77877635	77971457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77881213_77881341_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.68	chr18	+	3416	18	NNC	ENSMUSG00000025429.10	novel	2267	15	NA	NA	27	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0836186976605	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTGTGTTAGACATAC	2237	False	NA	NA	False	AATAAA	-29	NA	77877640	77971466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77877687_77881229_77881341_77882004_77882171_77882305_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.70	chr18	+	3136	15	FSM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	6	-875	6	875	multi-exon	FALSE	canonical	3	20	junction_1	7.17563905992821	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGTATTCTTG	-5	True	NA	NA	False	AATAAA	-17	NA	77882250	77971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.71	chr18	+	3115	15	NNC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	30731	875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.9572452965969	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGTATTCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	77912975	77971454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77913155_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.72	chr18	+	178	1	Intergenic	novelGene_14132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGCATGGCTT	NA	False	NA	NA	False	NA	NA	NA	77917032	77917210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77917000_77917200
ES.16937.73	chr18	+	179	1	Intergenic	novelGene_14134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAGGATATTAT	NA	False	NA	NA	False	NA	NA	NA	77928844	77929023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_77928800_77929000
ES.16937.74	chr18	+	2951	14	NNC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	51312	874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.8970437335168	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTAATTTGTATTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	77933556	77971453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77933674_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.75	chr18	+	2667	9	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	75693	-881	75693	881	3prime_fragment	FALSE	canonical	3	30	junction_2	5.23061898822692	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTATTCTTGTGTTAG	9086	False	NA	NA	False	AATAAA	-23	NA	77957937	77971460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ES.16937.76	chr18	+	3947	1	Genic_Genomic	ENSMUSG00000025429.10	novel	NA	NA	NA	NA	85264	876	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTTGTATTCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	77967508	77971455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_77967500_77971500
ES.16937.9	chr18	+	1843	12	NNC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	-2	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1584.86061644352	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGTGGGGGTGGGC	NA	False	NA	30	True	AATAAA	-18	NA	77861689	77870215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867638_77867750_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ES.16938.1	chr18	-	236	2	Intergenic	novelGene_14128	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGCTTCCATGCTTAT	NA	False	NA	NA	False	NA	NA	NA	77875400	77875069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77875109_77875203
ES.16938.2	chr18	-	174	1	Intergenic	novelGene_14129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	77875401	77875227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77875200_77875400
ES.16939.1	chr18	-	176	1	Intergenic	novelGene_14130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATATATATATTATACT	NA	False	NA	NA	False	NA	NA	NA	77886878	77886702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77886700_77886900
ES.1694.1	chr1	+	3530	1	Antisense	novelGene_ENSMUSG00000102326.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGTACTGGTATAGT	NA	False	NA	NA	False	NA	NA	NA	157173533	157177063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_157173500_157177100
ES.1694.2	chr1	+	655	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATAGTGAA	NA	False	NA	NA	False	NA	NA	NA	157173533	157174188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_157173500_157174200
ES.16940.1	chr18	-	160	1	Intergenic	novelGene_14131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	77893019	77892859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77892900_77893000
ES.16941.1	chr18	-	223	1	Intergenic	novelGene_14133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	77919693	77919470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77919500_77919700
ES.16942.1	chr18	-	170	1	Intergenic	novelGene_14135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77943170	77943000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77943000_77943200
ES.16943.1	chr18	-	175	1	Intergenic	novelGene_14136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	77963048	77962873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77962900_77963000
ES.16944.1	chr18	-	2746	1	Intergenic	novelGene_14137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGATGTCT	NA	False	NA	NA	False	NA	NA	NA	77981437	77978691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77978700_77981400
ES.16945.1	chr18	+	9814	44	FSM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	-86	-68	-86	68	multi-exon	FALSE	canonical	2	14	junction_24	5.20286146671814	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCGGTAAAATTGCCAC	NA	False	NA	NA	False	AATACA	-18	NA	77981593	78078296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_77981775_77991364_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.10	chr18	+	5652	22	NIC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	29911	65	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.87947763499926	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGTCGGTAAAATTGC	NA	False	NA	NA	False	AATACA	-15	NA	78028335	78078293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.11	chr18	+	5329	20	ISM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	52879	-10	36134	10	3prime_fragment	FALSE	canonical	3	20	junction_4	5.46659459898896	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATTGAAGGCTAATGTAG	4486	False	NA	NA	False	AATAAA	-29	NA	78034558	78078238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.12	chr18	+	4551	15	ISM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	74233	-11	-17491	11	3prime_fragment	FALSE	canonical	3	21	junction_3	5.91133466748588	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAGGCTAATGTAGA	NA	False	NA	NA	False	AATAAA	-30	NA	78055912	78078239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.13	chr18	+	3218	6	NIC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	-6728	11	intron_retention	FALSE	canonical	3	21	junction_2	1.6	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAGGCTAATGTAGA	3844	False	NA	NA	False	AATAAA	-30	NA	78066675	78078239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073671_78076139
ES.16945.4	chr18	+	12016	44	NNC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	-50	2311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.23670710280064	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACCTGTCTTTATTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	77981629	78080539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77981775_77991370_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015708_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.5	chr18	+	9669	47	NNC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	-36	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.4325691851524	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGGCTAATGTAGAT	NA	False	NA	NA	False	AATAAA	-31	NA	77981643	78078240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77981775_77988336_77989198_77990701_77990923_77991113_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139_78076607_78077978
ES.16945.6	chr18	+	9239	45	NNC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	6.26481714691638	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAATCCGAATTGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	77981650	78078228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_77981775_77991364_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139_78077529_78077978
ES.16945.7	chr18	+	5309	29	ISM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	9683	22034	-7062	-20251	internal_fragment	FALSE	canonical	2	14	junction_23	4.33719085236008	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACATACTGCATGACTTT	NA	False	NA	NA	False	NA	NA	NA	77991362	78056194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915
ES.16945.8	chr18	+	7560	35	NNC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	4268	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.89184020799409	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAGGCTAATGTAGA	NA	False	NA	NA	False	AATAAA	-30	NA	78002692	78078239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78072111_78072195_78073183_78073400_78073555_78073671_78076139
ES.16945.9	chr18	+	6104	25	NIC	ENSMUSG00000039840.9	novel	9660	44	NA	NA	26088	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.41010946087993	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAGGCTAATGTAGAT	NA	False	NA	NA	False	AATAAA	-31	NA	78024512	78078240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_78024711_78025522_78025634_78026685_78026806_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ES.16946.1	chr18	-	312	1	Intergenic	novelGene_14138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTGTCAGGCATC	NA	False	NA	NA	False	NA	NA	NA	77990409	77990097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_77990100_77990400
ES.16947.1	chr18	-	3236	7	NNC	ENSMUSG00000059336.15	novel	3665	9	NA	NA	9326	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.942809041582063	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTCTCATGTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	78157220	78143307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78157115
ES.16947.3	chr18	-	4323	9	FSM	ENSMUSG00000059336.15	ENSMUST00000091813.12	3665	9	-663	5	-663	-5	multi-exon	FALSE	canonical	0	0	junction_5	0.968245836551854	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCAGTCTCATGTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	78167304	78143310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78158935_78159126_78159587_78159745_78166456
ES.16948.1	chr18	-	175	1	Intergenic	novelGene_14139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAACAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	78211733	78211558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_78211600_78211700
ES.16949.1	chr18	+	181	1	Intergenic	novelGene_14140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGTGGAGGTAATGGT	NA	False	NA	NA	False	NA	NA	NA	79682023	79682204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_79682000_79682200
ES.1695.1	chr1	+	1593	1	Antisense	novelGene_ENSMUSG00000103808.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCACTGTCTATGAATT	NA	False	NA	NA	False	AATAAA	-8	NA	157232302	157233895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_157232300_157233900
ES.16950.1	chr18	-	159	1	Intergenic	novelGene_14141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATTTTTATTAAG	NA	False	NA	NA	False	NA	NA	NA	79983783	79983624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_79983600_79983800
ES.16951.1	chr18	+	264	2	Genic_Genomic	ENSMUSG00000117949.2	novel	253	1	NA	NA	232	6788	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATAATTAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	80063625	80070434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_80063711_80070255
ES.16952.1	chr18	+	1417	1	FSM	ENSMUSG00000117933.2	ENSMUST00000237994.2	246	1	-289	-882	-289	882	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	80072281	80073698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80072300_80073700
ES.16953.1	chr18	+	178	1	Intergenic	novelGene_14142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCTTATAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	80079157	80079335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80079200_80079300
ES.16954.1	chr18	+	3226	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	-77	-2	-77	2	multi-exon	FALSE	canonical	3	46	junction_2	5.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGTGTGTTATTGATA	NA	False	NA	22	True	AATAAA	-16	NA	80090027	80162856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80090358_80123039_80123263_80160183
ES.16954.2	chr18	+	2975	2	NIC	ENSMUSG00000056214.10	novel	3147	3	NA	NA	-48	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGTGTGTTATTGATAT	NA	False	NA	23	True	AATAAA	-17	NA	80090056	80162857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80090358_80160183
ES.16954.3	chr18	+	8123	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	2	-4978	2	4978	multi-exon	FALSE	canonical	3	46	junction_2	5.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAACAGCGTCACCCA	NA	False	NA	NA	False	NA	NA	NA	80090106	80167832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80090358_80123039_80123263_80160183
ES.16954.4	chr18	+	3778	1	Intergenic	novelGene_14143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCATGAGTTTGATA	NA	False	NA	NA	False	NA	NA	NA	80103793	80107571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80103800_80107600
ES.16954.5	chr18	+	161	1	Intergenic	novelGene_14144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	80140098	80140259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80140100_80140300
ES.16955.1	chr18	-	7367	1	Genic_Genomic	ENSMUSG00000096597.2	novel	NA	NA	NA	NA	-3927	2774	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAACAGAAC	NA	False	NA	NA	False	NA	NA	NA	80137104	80129737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_80129700_80137100
ES.16956.1	chr18	-	4633	6	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	30	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.431873188691	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCATTTTGCCCTGAA	5966	False	NA	NA	False	NA	NA	NA	80194667	80168363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80169371_80171033_80174210_80180698_80180789_80181367_80181520_80185863_80185985_80194580
ES.16956.12	chr18	-	4508	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-209	713	-209	-713	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTTGCTGTGATGAC	5727	False	NA	-6	True	AATAAA	-36	NA	80194906	80170238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.16	chr18	-	4223	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-35	824	-35	-824	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCCATTTATTAAACT	5901	False	NA	-117	True	ATTAAA	-18	NA	80194732	80170349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.18	chr18	-	4052	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-209	1169	-209	-1169	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGTTTCCCCACGAGT	5727	False	NA	NA	False	ATTAAA	-19	NA	80194906	80170694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.19	chr18	-	3540	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	5	1467	5	-1467	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTAGGTTTTGATATG	5941	False	NA	NA	False	AATAAA	-18	NA	80194692	80170992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.2	chr18	-	4442	5	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	4	1097	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69.4815623025274	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTGACTGCTGGAAT	5940	False	NA	NA	False	NA	NA	NA	80194693	80168428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80169371_80171033_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.20	chr18	-	2575	1	Intergenic	novelGene_14145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACAGTTCTTGGCCCT	6573	False	NA	NA	False	AAGAAA	-5	NA	80194060	80191485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80191500_80194100
ES.16956.3	chr18	-	5038	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	-30	4	-30	-4	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTACTCTTAAGTCAAG	5906	False	NA	83	True	AATAAA	-25	NA	80194727	80169529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ES.16956.6	chr18	-	5163	4	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.1761948599597	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACGCTAAGACATTACTC	5939	False	NA	73	True	AATAAA	-15	NA	80194694	80169539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80174210_80180698_80180789_80185863_80185985_80194412
ES.16956.7	chr18	-	4899	1	NIC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	20246	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCAATTCTTGTAACGC	NA	False	NA	60	True	AATAAA	-2	NA	80174451	80169552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80169600_80174500
ES.16956.8	chr18	-	5137	5	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	4	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.6271629895918	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCAATTCTTGTAACGC	5940	False	NA	60	True	AATAAA	-2	NA	80194693	80169552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80174210_80180698_80180789_80181367_80181520_80185863_80185985_80194576
ES.16957.1	chr18	+	183	1	Intergenic	novelGene_14146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTACACCACTTAG	NA	False	NA	NA	False	NA	NA	NA	80202225	80202408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80202200_80202400
ES.16958.1	chr18	+	206	1	Intergenic	novelGene_14147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTCTGCATTATCT	4653	False	NA	NA	False	NA	NA	NA	80211847	80212053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80211800_80212100
ES.16959.1	chr18	+	174	1	Intergenic	novelGene_14148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAATAAATAAATAAG	NA	False	NA	NA	False	NA	NA	NA	80219869	80220043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80219900_80220000
ES.1696.1	chr1	+	1404	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	-208	-2	-208	2	multi-exon	FALSE	canonical	3	989	junction_1	26.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCCAGTGTCTTCCT	NA	False	NA	37	True	AATAAA	-19	NA	157239713	157247808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_157240696_157241313_157241366_157247438
ES.1696.2	chr1	+	1452	2	NIC	ENSMUSG00000049881.14	novel	539	4	NA	NA	69	0	intron_retention	FALSE	canonical	3	1042	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGCTGGCCCAGTGTC	NA	False	NA	32	True	AATAAA	-45	NA	157240278	157247803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_157241366_157247438
ES.1696.3	chr1	+	2461	4	NNC	ENSMUSG00000049881.14	novel	1194	3	NA	NA	124	1856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	479.200027824151	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATGTTTATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	157240333	157249662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_157240696_157241313_157241366_157247438_157248469_157248645
ES.16960.1	chr18	+	1644	1	Intergenic	novelGene_14149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATCTCAAGCTAATTA	NA	False	NA	NA	False	AATAAA	-8	NA	80221656	80223300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80221700_80223300
ES.16961.1	chr18	+	222	1	Intergenic	novelGene_14150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGATGAATTCAGACCT	NA	False	NA	NA	False	AAAAAG	-26	NA	80228547	80228769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80228500_80228800
ES.16961.2	chr18	+	350	1	Intergenic	novelGene_14151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTCCATGAAAATCAGA	NA	False	NA	NA	False	NA	NA	NA	80228548	80228898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80228500_80228900
ES.16962.2	chr18	-	1401	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	-22	-2	-22	2	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTGTATACGCACAA	NA	False	NA	-1	True	AATAAA	-22	NA	80243895	80235477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ES.16962.3	chr18	-	3501	5	NIC	ENSMUSG00000024570.8	novel	1377	6	NA	NA	22	0	intron_retention	FALSE	canonical	3	264	junction_2	22.6867251933813	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTGTATACGCAC	NA	False	NA	-3	True	AATAAA	-20	NA	80243851	80235479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80236098_80236446_80236515_80238233_80240578_80240878_80241099_80243600
ES.16963.1	chr18	+	813	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	-28	3293	-28	224	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCCCAGTGTTTGTCCC	NA	False	NA	44	True	NA	NA	NA	80249981	80265777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ES.16963.10	chr18	+	1724	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	22	2332	22	1185	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCAAAACATGAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	80250031	80266738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ES.16963.11	chr18	+	1262	6	NNC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	-13	9784	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_4	1069.82832267612	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGATCTGCTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	80250031	80265740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627_80255095_80261918_80262023_80265393
ES.16963.12	chr18	+	820	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	24	214	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTCTTTACTCCCAG	NA	False	NA	34	True	AATAAA	-42	NA	80250033	80265767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ES.16963.13	chr18	+	526	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	32	3520	32	-3	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGATACTGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	80250041	80265550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ES.16963.14	chr18	+	1785	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-32	1191	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGAGTCCTGGCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	80250045	80266744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ES.16963.15	chr18	+	5652	2	FSM	ENSMUSG00000024571.16	ENSMUST00000126177.8	679	2	-15	-4958	1	2	multi-exon	FALSE	canonical	3	3077	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTTTGTTGTGGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	80250045	80255949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368
ES.16963.16	chr18	+	6201	6	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-29	2263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1191.46101908539	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTTGTTTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	80250048	80271333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393_80266876_80267045
ES.16963.18	chr18	+	4339	3	NIC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	-7	-12	intron_retention	FALSE	canonical	3	1096	junction_2	990.5	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250053	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250117_80250368_80253346_80254627
ES.16963.19	chr18	+	1628	4	NNC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	-7	-12	at_least_one_novel_splicesite	FALSE	canonical	3	163	junction_1	478.534104206679	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250053	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250124_80250368_80250559_80253276_80253346_80254627
ES.16963.2	chr18	+	3920	5	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-14	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1173.71610707189	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTTGGTCATGATGTT	NA	False	NA	5	True	NA	NA	NA	80249995	80269068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393_80266876_80267045
ES.16963.20	chr18	+	3930	6	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1191.46101908539	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTGGTCATGATGT	NA	False	NA	4	True	NA	NA	NA	80250053	80269067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393_80266876_80267045
ES.16963.21	chr18	+	786	5	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-23	194	at_least_one_novel_splicesite	FALSE	canonical	3	163	junction_1	910.17041673524	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGCTTACTGCGT	NA	False	NA	14	True	AATAAA	-22	NA	80250054	80265747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250124_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ES.16963.23	chr18	+	1914	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-20	1332	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGGTGGCGCATGCCTT	NA	False	NA	NA	False	NA	NA	NA	80250057	80266885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ES.16963.26	chr18	+	6111	5	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-14	2257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1173.71610707189	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	80250063	80271327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393_80266876_80267045
ES.16963.27	chr18	+	745	4	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-13	194	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	1089.22796308007	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGCTTACTGCGT	NA	False	NA	14	True	AATAAA	-22	NA	80250064	80265747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250162_80250368_80250559_80261918_80262023_80265393
ES.16963.28	chr18	+	5854	1	NIC	ENSMUSG00000024571.16	novel	1649	4	NA	NA	-9	-12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	747	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250072	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250100_80255900
ES.16963.29	chr18	+	811	6	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	0	191	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	1167.62966731751	765	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTGCTGTGCTTACTG	NA	False	NA	11	True	AATAAA	-19	NA	80250077	80265744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80263471_80263530_80265393
ES.16963.3	chr18	+	1716	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	-13	-20	-13	11	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATTGGTCAGTCCTTA	NA	False	NA	NA	False	AATAAA	-32	NA	80249999	80255967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ES.16963.30	chr18	+	1625	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	13	12	13	-12	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250094	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ES.16963.31	chr18	+	1730	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	-5	30	-5	-12	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250104	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
ES.16963.32	chr18	+	2486	1	NIC	ENSMUSG00000024571.16	novel	1649	4	NA	NA	-2	-1389	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	723	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTTGTTATCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	80250107	80252593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250100_80252600
ES.16963.33	chr18	+	1710	4	NNC	ENSMUSG00000024571.16	novel	1755	4	NA	NA	-1	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	554.842920714202	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250108	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250261_80250368_80250559_80253276_80253346_80254627
ES.16963.34	chr18	+	3960	5	NNC	ENSMUSG00000057130.13	novel	517	4	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1157.17479232828	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTTACTTCTTGGTCAT	NA	False	NA	-1	True	NA	NA	NA	80250109	80269062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250277_80250368_80250559_80261918_80262023_80265393_80266876_80267045
ES.16963.35	chr18	+	815	4	FSM	ENSMUSG00000057130.13	ENSMUST00000025464.8	517	4	32	-330	1	194	multi-exon	FALSE	canonical	3	221	junction_1	1036.43309265748	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGCTTACTGCGT	NA	False	NA	14	True	AATAAA	-22	NA	80250109	80265747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250277_80250368_80250559_80261918_80262023_80265393
ES.16963.36	chr18	+	881	5	NIC	ENSMUSG00000057130.13	novel	517	4	NA	NA	1	191	combination_of_known_splicesites	FALSE	canonical	3	221	junction_1	896.575254789022	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTGCTGTGCTTACTG	NA	False	NA	11	True	AATAAA	-19	NA	80250109	80265744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250277_80250368_80250559_80253276_80253346_80261918_80262023_80265393
ES.16963.37	chr18	+	2913	3	ISM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	28	-9	0	0	intron_retention	FALSE	canonical	3	109	junction_1	567.5	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACACGTTTGTTGTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	80250109	80255947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_80250162_80250368_80250559_80253276
ES.16963.38	chr18	+	2819	4	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	446	193	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1146.45579456379	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCTGTGCTTACTGCG	2699	False	NA	13	True	AATAAA	-21	NA	80259040	80265746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80259191_80259378_80259562_80259889_80262023_80265393
ES.16963.39	chr18	+	6301	2	NNC	ENSMUSG00000057130.13	novel	461	3	NA	NA	6265	2260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTGTTTGTTTGTT	404	False	NA	NA	False	ATTAAA	-16	NA	80264859	80271330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80266876_80267045
ES.16963.4	chr18	+	2984	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	-44	-1972	-12	-2	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTGTGGGAATTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	80250000	80255954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80253276
ES.16963.5	chr18	+	2328	2	FSM	ENSMUSG00000024571.16	ENSMUST00000126177.8	679	2	-47	-1602	1	-1389	multi-exon	FALSE	canonical	3	3077	junction_1	0	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTTGTTATCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	80250013	80252593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368
ES.16963.6	chr18	+	1584	3	NIC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	9	-12	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	1534.5	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	80250021	80255926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80250117_80250368_80250559_80254627
ES.16963.7	chr18	+	1879	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	14	2185	14	1332	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGGTGGCGCATGCCTT	NA	False	NA	NA	False	NA	NA	NA	80250023	80266885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ES.16963.8	chr18	+	738	4	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	14	184	at_least_one_novel_splicesite	FALSE	canonical	3	163	junction_1	1063.7732632265	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGGGATCTGCTGTG	NA	False	NA	4	True	AATAAA	-12	NA	80250023	80265737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80250124_80250368_80250559_80261918_80262023_80265393
ES.16964.1	chr18	-	1824	1	Antisense	novelGene_ENSMUSG00000024571.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAAAATTTATCATCAC	4851	False	NA	NA	False	NA	NA	NA	80252591	80250767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_80250800_80252600
ES.16965.1	chr18	-	282	1	Intergenic	novelGene_14152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80260907	80260625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80260600_80260900
ES.16966.1	chr18	-	1163	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-59	0	-59	0	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCTTATGTGTATG	NA	False	NA	NA	False	AATACA	-14	NA	80280107	80272972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
ES.16966.2	chr18	-	1006	4	NNC	ENSMUSG00000078963.4	novel	1104	4	NA	NA	483	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.4419672692682	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCTTATGTGTATG	NA	False	NA	NA	False	AATACA	-14	NA	80279565	80272972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80273777_80276629_80276725_80278663_80278731_80279525
ES.16966.3	chr18	-	788	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	22	294	22	-294	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGGTCATAGCCTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	80280026	80273266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
ES.16966.4	chr18	-	644	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	-2	462	-2	-462	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	80280050	80273434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
ES.16967.1	chr18	-	174	1	Intergenic	novelGene_14153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAGAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80297282	80297108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80297100_80297300
ES.16968.1	chr18	+	1903	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	-31	-8	-31	0	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGTGTAAGTAAGTCAG	NA	False	NA	14	True	AATAAA	-14	NA	80299467	80335939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ES.16968.10	chr18	+	1381	2	ISM	ENSMUSG00000034006.18	ENSMUST00000140594.8	2356	5	15626	8641	9093	2	internal_fragment	FALSE	canonical	3	12	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGCCCCCCTTTCTCTG	NA	False	NA	NA	False	ACTAAA	-15	NA	80315147	80327288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_80315731_80326490
ES.16968.2	chr18	+	1927	6	NIC	ENSMUSG00000034006.18	novel	1989	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	13.8650640099496	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTTCATGTGGTGTA	NA	False	NA	4	True	AATAAA	-37	NA	80299487	80335929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80299534_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ES.16968.3	chr18	+	1955	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	-42	-2	-8	0	multi-exon	FALSE	canonical	3	25	junction_3	7.26291952316697	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTTCATGTGGTGTA	NA	False	NA	4	True	AATAAA	-37	NA	80299490	80335929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ES.16968.4	chr18	+	1650	4	NIC	ENSMUSG00000034006.18	novel	1864	5	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.624953392932	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTTCATGTGGTGTA	NA	False	NA	4	True	AATAAA	-37	NA	80299493	80335929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_80299534_80299996_80300334_80306634_80306769_80334790
ES.16968.5	chr18	+	1541	4	FSM	ENSMUSG00000034006.18	ENSMUST00000134545.3	3258	4	-28	1745	-5	-1745	multi-exon	FALSE	canonical	3	12	junction_3	14.3527000944073	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGGGTAATGAGGTAA	NA	False	NA	NA	False	AATATA	-17	NA	80299493	80316621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676
ES.16968.6	chr18	+	742	2	ISM	ENSMUSG00000034006.18	ENSMUST00000151677.9	3192	4	-8	17667	-4	-6001	5prime_fragment	FALSE	canonical	3	16	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGAAGGCTCCCTTGAC	NA	False	NA	NA	False	AATAAA	-11	NA	80299494	80300699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_80299534_80299996
ES.16968.7	chr18	+	2437	5	NNC	ENSMUSG00000034006.18	novel	1911	5	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	20.4496332485451	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATGCTTCATGTGGTG	NA	False	NA	2	True	AATAAA	-35	NA	80299523	80335927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80300334_80306634_80306769_80325697_80325837_80326490_80326708_80334790
ES.16968.8	chr18	+	2361	5	FSM	ENSMUSG00000034006.18	ENSMUST00000140594.8	2356	5	3	-8	3	-2	multi-exon	FALSE	canonical	3	12	junction_2	14.7732867026942	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGGTGTAAGTAAGTC	NA	False	NA	12	True	AATAAA	-45	NA	80299524	80335937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ES.16968.9	chr18	+	3986	5	NNC	ENSMUSG00000034006.18	novel	2080	8	NA	NA	6508	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1058763400208	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATGCTTCATGTGGTG	NA	False	NA	2	True	AATAAA	-35	NA	80312562	80335927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_80313745_80314245_80315314_80315348_80315731_80326490_80326708_80334790
ES.16969.1	chr18	-	263	1	Intergenic	novelGene_14154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAAGAGAAAAAAAG	4985	False	NA	NA	False	NA	NA	NA	80307996	80307733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80307700_80308000
ES.1697.1	chr1	-	6006	5	NNC	ENSMUSG00000070565.12	novel	10047	18	NA	NA	31540	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.27760839478607	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAGAGTTGCTACTATC	NA	False	NA	-3	True	AATAAA	-21	NA	156977471	156962758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156966252_156966352_156968446_156973759_156973848_156975199_156975403_156977342
ES.1697.10	chr1	-	4617	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-616	12	45	-12	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAAGTTTGATGCTTT	4411	False	NA	NA	False	AAGAAA	-31	NA	157240120	156968115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.11	chr1	-	2737	11	ISM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-598	23032	63	12413	5prime_fragment	FALSE	canonical	1	2	junction_2	4.0853396431631	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATTAAGCTCTCGTA	4429	False	NA	NA	False	AATAAA	-16	NA	157240102	156991135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.12	chr1	-	191	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTAATTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	157132321	157132130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157132100_157132300
ES.1697.13	chr1	-	231	1	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTCTTCTATATG	NA	False	NA	NA	False	NA	NA	NA	157164157	157163926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157163900_157164200
ES.1697.14	chr1	-	2184	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCCTTAAACTAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	157216228	157214044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157214000_157216200
ES.1697.2	chr1	-	6156	9	NNC	ENSMUSG00000070565.12	novel	4013	18	NA	NA	17643	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.54950975679639	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAGAGTTGCTACTAT	5784	False	NA	-4	True	AATAAA	-20	NA	156991368	156962759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156963974_156965268_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272
ES.1697.3	chr1	-	9942	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-594	-5335	67	-17	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTCAGACTAAGAGT	4433	False	NA	-13	True	AATAAA	-11	NA	157240098	156962768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.4	chr1	-	4562	3	ISM	ENSMUSG00000070565.12	ENSMUST00000078308.13	10047	18	264856	1330	33702	-1330	3prime_fragment	FALSE	canonical	2	5	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCCTGAGGAAGACAC	NA	False	NA	NA	False	AATAAA	-11	NA	156975309	156964081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_156968446_156973759_156973848_156975199
ES.1697.5	chr1	-	5157	19	NNC	ENSMUSG00000070565.12	novel	4013	18	NA	NA	39	599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.57313680605704	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTGTAAGTACCGTGT	4405	False	NA	NA	False	TTTAAA	-18	NA	157240126	156967504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_156968446_156971139_156971171_156973759_156973848_156975307_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.6	chr1	-	5166	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-678	-475	-17	475	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTAGGAATGATTTCT	4349	False	NA	NA	False	GATAAA	-21	NA	157240182	156967628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.7	chr1	-	5175	18	FSM	ENSMUSG00000070565.12	ENSMUST00000078308.13	10047	18	-13	4885	-13	467	multi-exon	FALSE	canonical	0	0	junction_6	3.97135068932194	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAACTAGACTAGGAA	4353	False	NA	NA	False	GATAAA	-13	NA	157240178	156967636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986429_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.8	chr1	-	4793	18	FSM	ENSMUSG00000070565.12	ENSMUST00000078308.13	10047	18	0	5254	0	98	multi-exon	FALSE	canonical	0	0	junction_6	3.97135068932194	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTTTTTAATTATTAC	4366	False	NA	NA	False	AATATA	-24	NA	157240165	156968005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986429_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.1697.9	chr1	-	4684	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	-578	-93	83	93	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGATTACCTTTTTAATT	4449	False	NA	NA	False	AATATA	-19	NA	157240082	156968010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ES.16970.1	chr18	-	3906	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	-191	-2	-191	2	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGGTGTGTCACAG	NA	False	NA	-1	True	AATAAA	-20	NA	80513101	80451171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.10	chr18	-	3440	13	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	51.1361879907197	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTGTTCTCTGGTG	NA	False	NA	-9	True	AATAAA	-12	NA	80513105	80451179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512909
ES.16970.11	chr18	-	3876	14	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.9726387564969	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTGTGTTCTCTGGT	NA	False	NA	-10	True	AATAAA	-11	NA	80512866	80451180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80456770_80456985_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.12	chr18	-	3544	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.0249406744333	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTGTGTTCTCTGGT	NA	False	NA	-10	True	AATAAA	-11	NA	80512911	80451180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.14	chr18	-	6664	2	NNC	ENSMUSG00000033323.15	novel	1334	4	NA	NA	26102	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTGTGTGTTCTCTGG	NA	False	NA	-11	True	AATAAA	-10	NA	80457901	80451181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80455177_80455232
ES.16970.15	chr18	-	4477	13	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	21	-3	intron_retention	FALSE	canonical	2	4	junction_4	65.5909038409036	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCTGTGTGTTCTCTG	NA	False	NA	-12	True	AATAAA	-9	NA	80512889	80451182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80485226_80485387_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80503229_80512447
ES.16970.16	chr18	-	3119	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	15	579	15	-573	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTTGTAAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	80512895	80451752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.17	chr18	-	3279	12	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-11	-25795	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	66.6912213733147	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGTTTCTTCTGTC	NA	False	NA	NA	False	AATACA	-16	NA	80512921	80476974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80477544_80485226_80485387_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.2	chr18	-	4704	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	130	junction_7	21.1866947176253	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTCTGGTGTGTCAC	NA	False	NA	-3	True	AATAAA	-18	NA	80512918	80451173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.3	chr18	-	3702	13	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.4951717356516	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTCTGGTGTGTCA	NA	False	NA	-4	True	AATAAA	-17	NA	80512889	80451174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494544_80495515_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.4	chr18	-	4214	14	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-342	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	63.2426528230329	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTCTGGTGTGTCA	NA	False	NA	-4	True	AATAAA	-17	NA	80513252	80451174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80485226_80485387_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.5	chr18	-	5392	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	130	junction_7	19.5185861837268	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTCTCTGGTGTGTC	NA	False	NA	-5	True	AATAAA	-16	NA	80512916	80451175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.7	chr18	-	3691	13	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.6188891298023	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTCTCTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	80512900	80451177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477542_80489100_80489311_80490638_80490775_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.8	chr18	-	3505	12	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	53.9768851660727	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTGTTCTCTGGTG	NA	False	NA	-9	True	AATAAA	-12	NA	80512889	80451179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494532_80499253_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16970.9	chr18	-	3708	13	NNC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.4951717356516	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTGTTCTCTGGTG	NA	False	NA	-9	True	AATAAA	-12	NA	80512895	80451179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80451997_80463657_80463846_80477380_80477551_80489091_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ES.16971.1	chr18	-	177	1	Intergenic	novelGene_14155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTTTGTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	80543406	80543229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80543200_80543400
ES.16972.1	chr18	-	4075	8	FSM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	43	387	43	-387	multi-exon	FALSE	canonical	0	0	junction_2	1.0690449676497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCCTGTGTTCCGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	80751345	80691036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80740769_80741872_80751248
ES.16973.1	chr18	+	2304	1	Intergenic	novelGene_14158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	80910599	80912903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_80910600_80912900
ES.16974.1	chr18	+	5746	2	Antisense	novelGene_ENSMUSG00000024566.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGAAACAAAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	80919947	80940134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_80920587_80935027
ES.16975.1	chr18	-	6542	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	71	-1463	-4	1214	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCAGTTGTCTTCCTCA	9817	False	NA	NA	False	GATAAA	-23	NA	80977202	80776141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.11	chr18	-	3623	21	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	31.5694076599483	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTGACCTGAGCGCC	9752	False	NA	-31	True	AATAAA	-23	NA	80977267	80778290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80977038
ES.16975.12	chr18	-	4411	30	NIC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	33.9678801908673	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTGACCTGAGCGCC	9757	False	NA	-31	True	AATAAA	-23	NA	80977262	80778290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80780026_80780060_80781867_80781997_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.13	chr18	-	4302	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	28.3810539791197	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9746	False	NA	-32	True	AATAAA	-22	NA	80977273	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.14	chr18	-	6960	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	102	junction_23	14.6198279401171	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9752	False	NA	-32	True	AATAAA	-22	NA	80977267	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.15	chr18	-	3787	24	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-56	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	45.7321866112864	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	7759	False	NA	-32	True	AATAAA	-22	NA	80961094	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80952806_80952921_80956011_80956163_80960919
ES.16975.16	chr18	-	4205	27	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	41.7556288945419	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9823	False	NA	-32	True	AATAAA	-22	NA	80977196	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890381_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.17	chr18	-	4330	29	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	41.6313234456549	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9749	False	NA	-32	True	AATAAA	-22	NA	80977270	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901852_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.19	chr18	-	4396	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_18	26.3690698805415	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9736	False	NA	-32	True	AATAAA	-22	NA	80977283	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.2	chr18	-	5175	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-55	237	-6	12	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGGAGCTTGTCAAGTG	9766	False	NA	NA	False	AATAAA	-29	NA	80977253	80777592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.20	chr18	-	4433	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.9333992780181	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTGACCTGAGCGC	9769	False	NA	-32	True	AATAAA	-22	NA	80977250	80778291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799751_80801505_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887810_80890381_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.21	chr18	-	4543	30	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.9872067667098	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9770	False	NA	-33	True	AATAAA	-21	NA	80977249	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780060_80781867_80782144_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.22	chr18	-	4919	27	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_16	28.9207241268899	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9769	False	NA	-33	True	AATAAA	-21	NA	80977250	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.24	chr18	-	4243	28	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	36.2222600923835	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9790	False	NA	-33	True	AATAAA	-21	NA	80977229	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799754_80801505_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80977038
ES.16975.25	chr18	-	4326	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_24	27.7599943074673	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9773	False	NA	-33	True	AATAAA	-21	NA	80977246	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.27	chr18	-	5147	29	NIC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	35	junction_1	27.5072114848719	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9735	False	NA	-33	True	AATAAA	-21	NA	80977284	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.28	chr18	-	4286	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	34.1616025555482	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9770	False	NA	-33	True	AATAAA	-21	NA	80977249	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80781997_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.3	chr18	-	5051	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_21	27.8299263581022	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTCCTACAAGGGAGC	9752	False	NA	NA	False	AATAAA	-19	NA	80977267	80777602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.30	chr18	-	4032	27	NIC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	36.0288551353892	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9770	False	NA	-33	True	AATAAA	-21	NA	80977249	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80977038
ES.16975.31	chr18	-	4547	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.032156839837	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9784	False	NA	-33	True	AATAAA	-21	NA	80977235	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782069_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808457_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.32	chr18	-	5014	27	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_8	35.8281772355735	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9767	False	NA	-33	True	AATAAA	-21	NA	80977252	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797618_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.33	chr18	-	4417	30	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.4537957998295	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTTTGACCTGAGCG	9818	False	NA	-33	True	AATAAA	-21	NA	80977201	80778292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780054_80781863_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912960_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.38	chr18	-	4340	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_21	27.8299263581022	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCCTTTGACCTGAGC	9772	False	NA	-34	True	AATAAA	-20	NA	80977247	80778293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.39	chr18	-	4319	29	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.4832205252261	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9812	False	NA	-35	True	AATAAA	-19	NA	80977207	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80781997_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.4	chr18	-	5159	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	-10	1	-8	-1	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTCAGTCCTACAAGGG	9736	False	NA	NA	False	AATAAA	-16	NA	80977283	80777605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.40	chr18	-	4366	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	28.1425433016319	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9759	False	NA	-35	True	AATAAA	-19	NA	80977260	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.41	chr18	-	4310	28	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.7536086926171	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9773	False	NA	-35	True	AATAAA	-19	NA	80977246	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80934393_80934509_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.42	chr18	-	4408	28	NNC	ENSMUSG00000024566.11	novel	4326	28	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.9072809836428	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9766	False	NA	-35	True	AATAAA	-19	NA	80977253	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797650_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.43	chr18	-	4298	29	NIC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	35.3781863784532	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9770	False	NA	-35	True	AATAAA	-19	NA	80977249	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.44	chr18	-	5148	29	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_23	45.6009197007146	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGCCTTTGACCTGAG	9770	False	NA	-35	True	AATAAA	-19	NA	80977249	80778294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80934393_80934509_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.45	chr18	-	4351	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	27.8896102006259	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGATGCCTTTGACCTG	9784	False	NA	-37	True	AATAAA	-17	NA	80977235	80778296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809079_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.46	chr18	-	4530	31	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	40.1204436665399	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGATGCCTTTGACCT	9748	False	NA	-38	True	AATAAA	-16	NA	80977271	80778297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80914445_80914488_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.47	chr18	-	4422	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	27.8931086507776	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGATGCCTTTGACCT	9777	False	NA	-38	True	AATAAA	-16	NA	80977242	80778297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799751_80801505_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.48	chr18	-	4445	30	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	45.7353187557326	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGATGCCTTTGACCT	9773	False	NA	-38	True	AATAAA	-16	NA	80977246	80778297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80948866_80949010_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.49	chr18	-	4405	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	27.7229367941024	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCCCAGATGCCTTTG	9773	False	NA	-42	True	AATAAA	-12	NA	80977246	80778301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952900_80956011_80956163_80960919_80961094_80977038
ES.16975.5	chr18	-	5009	27	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	43.2410335474133	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGCTCAGTCCTACAAG	9792	False	NA	NA	False	AATAAA	-14	NA	80977227	80777607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808923_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.50	chr18	-	4405	29	NNC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	13	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	35.9393621966506	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCCCAGATGCCTTTG	9785	False	NA	-42	True	AATAAA	-12	NA	80977234	80778301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820019_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901852_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.51	chr18	-	4989	27	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	0	-12	intron_retention	FALSE	canonical	2	2	junction_20	28.3588845225081	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCCCAGATGCCTTTG	9756	False	NA	-42	True	AATAAA	-12	NA	80977263	80778301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.52	chr18	-	5226	29	NNC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	18	-13	intron_retention	FALSE	canonical	0	0	junction_2	39.0088948517004	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCCAGATGCCTTT	9790	False	NA	-43	True	AATAAA	-11	NA	80977229	80778302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80779365_80780026_80780054_80781863_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851680_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.53	chr18	-	3994	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-72	1435	3	491	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACGTAGAACTCAGCT	9749	False	NA	NA	False	NA	NA	NA	80977270	80778790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.54	chr18	-	3913	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	2	1235	2	442	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCTGTTAGCTGATGCA	9748	False	NA	NA	False	NA	NA	NA	80977271	80778839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.55	chr18	-	3520	2	Intergenic	novelGene_14156	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTATTCTTGGTCTGGAA	NA	False	NA	NA	False	AAAACA	-3	NA	80817343	80813706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80816256_80816372
ES.16975.56	chr18	-	2618	1	NIC	ENSMUSG00000024566.11	novel	5357	30	NA	NA	-32743	-15795	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	80838630	80836012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80836000_80838600
ES.16975.57	chr18	-	1621	14	NNC	ENSMUSG00000024566.11	novel	770	9	NA	NA	4	13849	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.7620823148428	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGTTAGTGAACTA	9825	False	NA	NA	False	AATAAA	-16	NA	80977194	80837993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_80838167_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.58	chr18	-	3809	1	Intergenic	novelGene_14157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGTATTTTGGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	80849194	80845385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80845400_80849200
ES.16975.59	chr18	-	2325	5	FSM	ENSMUSG00000024566.11	ENSMUST00000235385.2	2533	5	-6	214	-6	-214	multi-exon	FALSE	canonical	3	129	junction_4	6.96419413859206	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAATTTTTCTTTTCTT	9738	False	NA	NA	False	NA	NA	NA	80977281	80933495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.6	chr18	-	5641	27	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	24	-5	intron_retention	FALSE	canonical	2	2	junction_20	28.3588845225081	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTAGCTCAGTCCTACA	9796	False	NA	NA	False	AATAAA	-12	NA	80977223	80777609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.60	chr18	-	6435	1	Intergenic	novelGene_14159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	80947387	80940952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80941000_80947400
ES.16975.7	chr18	-	4538	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-85	904	-8	30	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTGAGCATATTCCC	9736	False	NA	0	True	NA	NA	NA	80977283	80778259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.8	chr18	-	4469	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	3	678	3	7	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCGCCTTTGTTCT	9749	False	NA	-23	True	AATAAA	-31	NA	80977270	80778282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16975.9	chr18	-	5097	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	-1	0	intron_retention	FALSE	canonical	3	102	junction_23	15.0636509600732	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACCTGAGCGCCT	9755	False	NA	-30	True	AATAAA	-24	NA	80977264	80778289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ES.16976.1	chr18	-	3185	1	Intergenic	novelGene_14160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80996158	80992973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_80993000_80996200
ES.16977.1	chr18	+	2370	5	NNC	ENSMUSG00000098720.2	novel	642	2	NA	NA	-671	3275	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCTTTCTGTAATCTC	NA	False	NA	NA	False	AATAAA	-17	NA	81029999	81035065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_81031709_81032122_81032219_81033586_81033736_81034050_81034134_81034732
ES.16977.2	chr18	+	1717	1	Genic_Genomic	ENSMUSG00000098720.2	novel	NA	NA	NA	NA	-595	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGTTGCAACACACAC	NA	False	NA	NA	False	AATAAA	-28	NA	81030075	81031792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_81030100_81031800
ES.16978.1	chr18	-	11241	2	NIC	ENSMUSG00000024565.11	novel	4214	3	NA	NA	91	2761	intron_retention	FALSE	canonical	3	38	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCCTGGAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	81029895	81006829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81017845_81029669
ES.16978.10	chr18	-	5451	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-482	-755	-247	755	multi-exon	FALSE	canonical	3	38	junction_2	5.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAAAAGATGT	NA	False	NA	73	True	NA	NA	NA	81030233	81011681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81017845_81029669
ES.16978.11	chr18	-	7036	2	NIC	ENSMUSG00000024565.11	novel	4214	3	NA	NA	-628	683	intron_retention	FALSE	canonical	3	38	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTGCAAATCTTAATT	NA	False	NA	1	True	AATAAA	-19	NA	81030614	81011753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81017845_81029669
ES.16978.12	chr18	-	5163	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	-247	2163	-247	683	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTGCAAATCTTAATT	NA	False	NA	1	True	AATAAA	-19	NA	81030233	81011753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.13	chr18	-	4538	5	NNC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	81	680	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17.0733710789639	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTTGCAAATCTTA	NA	False	NA	-2	True	AATAAA	-16	NA	81029905	81011756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_81012571_81012864_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.14	chr18	-	5199	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	-635	2515	-635	331	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTGGCTATGTGATCT	NA	False	NA	NA	False	AATAAA	-39	NA	81030621	81012105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.15	chr18	-	1590	1	NIC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	4547	327	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATCTGGCTATGTG	NA	False	NA	NA	False	AATAAA	-35	NA	81013699	81012109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81012100_81013700
ES.16978.16	chr18	-	4727	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-186	-327	49	327	multi-exon	FALSE	canonical	3	38	junction_2	5.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATCTGGCTATGTG	NA	False	NA	NA	False	AATAAA	-35	NA	81029937	81012109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81017845_81029669
ES.16978.17	chr18	-	3533	4	NNC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	776	325	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	20.0166597280032	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATACATCTGGCTATG	NA	False	NA	NA	False	AATAAA	-33	NA	81017470	81012111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_81013120_81014395_81014737_81014952_81016244_81016577
ES.16978.18	chr18	-	4359	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-117	-28	-117	28	multi-exon	FALSE	canonical	3	38	junction_2	5.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTTAGGAACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	81029868	81012408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81017845_81029669
ES.16978.19	chr18	-	4147	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	114	2818	114	28	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTTAGGAACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	81029872	81012408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.2	chr18	-	8502	2	NIC	ENSMUSG00000024565.11	novel	4214	3	NA	NA	87	18	intron_retention	FALSE	canonical	3	38	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTAAATAACTATCGATAA	NA	False	NA	NA	False	NA	NA	NA	81029899	81009572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81017845_81029669
ES.16978.20	chr18	-	2642	1	NIC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	3196	28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTTAGGAACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	81015050	81012408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81012400_81015000
ES.16978.3	chr18	-	6599	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-152	-2233	83	-613	multi-exon	FALSE	canonical	3	38	junction_2	5.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCCCTGATTCTTCC	NA	False	NA	2	True	AATAAA	-27	NA	81029903	81010203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81017845_81029669
ES.16978.4	chr18	-	7114	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	-648	613	-648	-613	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCCCTGATTCTTCC	NA	False	NA	2	True	AATAAA	-27	NA	81030634	81010203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.5	chr18	-	5703	4	NNC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	-77	-621	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.9920619917784	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAATCGTGTTCCCTG	NA	False	NA	-6	True	AATAAA	-19	NA	81029828	81010211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_81013120_81014395_81014519_81015331_81017845_81029669
ES.16978.6	chr18	-	5432	1	NIC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	2602	-622	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAATCGTGTTCCCT	NA	False	NA	-7	True	AATAAA	-18	NA	81015644	81010212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_81010200_81015600
ES.16978.7	chr18	-	4569	6	NNC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	91	956	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.177069640589	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTATTTAACTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	81029895	81011480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_81011576_81011810_81012571_81012864_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.8	chr18	-	5823	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	-634	1890	-634	956	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTATTTAACTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	81030620	81011480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ES.16978.9	chr18	-	5759	5	NNC	ENSMUSG00000024565.11	novel	7079	4	NA	NA	-628	953	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	18.2260116317312	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGATTTATTTAACTT	NA	False	NA	NA	False	AATAAA	-24	NA	81030614	81011483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669_81029826_81029880
ES.16979.1	chr18	-	4544	1	Intergenic	novelGene_14161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	81347540	81342996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_81343000_81347500
ES.1698.1	chr1	-	1208	2	Antisense	novelGene_ENSMUSG00000049881.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157245244	157243976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_157244732_157244791
ES.16980.1	chr18	+	2995	1	Intergenic	novelGene_14162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAACAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81857022	81860017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_81857000_81860000
ES.16981.1	chr18	-	2969	5	Intergenic	novelGene_14163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTTTTTTTTT	NA	False	NA	NA	False	GATAAA	-23	NA	82251016	82087803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82090336_82120792_82120900_82121284_82121377_82172271_82172394_82250900
ES.16981.2	chr18	-	625	3	Intergenic	novelGene_14164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAACGTATTTATTTAT	NA	False	NA	NA	False	AATAAA	-7	NA	82247591	82153591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82153879_82172271_82172394_82247375
ES.16981.3	chr18	-	183	1	Intergenic	novelGene_14165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGAGATT	NA	False	NA	NA	False	NA	NA	NA	82164432	82164249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82164200_82164400
ES.16982.1	chr18	+	2041	1	Intergenic	novelGene_14166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTCATAGAGCTTCATT	NA	False	NA	NA	False	NA	NA	NA	82255779	82257820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82255800_82257800
ES.16982.2	chr18	+	983	4	Antisense	novelGene_ENSMUSG00000117913.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	82257614	82266460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_82257734_82259456_82259616_82265077_82265124_82265801
ES.16983.1	chr18	+	2215	3	NNC	ENSMUSG00000118279.2	novel	670	3	NA	NA	-16572	1634	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGACTAAGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	82282837	82303484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82283014_82301180_82301302_82301566
ES.16984.1	chr18	+	1611	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	-105	-151	-105	151	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AGTAAA	-13	NA	82356481	82358092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82356500_82358100
ES.16985.1	chr18	-	2720	2	ISM	ENSMUSG00000024553.9	ENSMUST00000065224.8	2987	3	386	7670	386	-7670	5prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	82424516	82418174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_82419991_82423612
ES.16986.1	chr18	-	229	1	Intergenic	novelGene_14167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGAGTGTAGC	NA	False	NA	NA	False	NA	NA	NA	82482936	82482707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82482700_82482900
ES.16987.1	chr18	+	4804	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	-22	15	-22	-15	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTACTAATTGCACATG	NA	False	NA	20	True	ATTAAA	-20	NA	82493248	82576813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
ES.16987.2	chr18	+	1439	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	54	3304	38	-3304	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGCAGATGGTCTA	NA	False	NA	NA	False	NA	NA	NA	82493324	82573524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
ES.16987.3	chr18	+	2065	6	FSM	ENSMUSG00000041607.18	ENSMUST00000142850.9	2056	6	-33	24	6	-19	multi-exon	FALSE	canonical	0	0	junction_3	2.71293199325011	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAATAAACTTGC	7782	False	NA	-7	True	NA	NA	NA	82572600	82603732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82572876_82590949_82591052_82593296_82593333_82593725_82593759_82597060_82597184_82602236
ES.16987.4	chr18	+	2033	5	FSM	ENSMUSG00000041607.18	ENSMUST00000132369.3	1947	5	-85	-1	-14	0	multi-exon	FALSE	canonical	1	4	junction_1	0.866025403784439	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTGCCCAGGTGT	7801	False	NA	13	True	AATAAA	-14	NA	82572619	82603752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82572876_82590949_82591052_82593296_82593333_82597060_82597184_82602236
ES.16987.5	chr18	+	2085	6	FSM	ENSMUSG00000041607.18	ENSMUST00000153478.9	2070	6	-23	8	7	0	multi-exon	FALSE	canonical	0	0	junction_2	2.71293199325011	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTTGCCCAGGTGTCT	7829	False	NA	15	True	AATAAA	-16	NA	82572647	82603754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82572876_82579902_82579981_82590949_82591052_82593296_82593333_82597060_82597184_82602236
ES.16987.6	chr18	+	1948	5	FSM	ENSMUSG00000041607.18	ENSMUST00000114674.11	432	5	-45	-1471	5	0	multi-exon	FALSE	canonical	0	0	junction_2	2.34520787991171	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTGCCCAGGTGT	7841	False	NA	13	True	AATAAA	-14	NA	82572659	82603752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82572876_82579902_82579981_82590949_82591052_82593296_82593333_82602236
ES.16987.7	chr18	+	1870	4	FSM	ENSMUSG00000041607.18	ENSMUST00000075372.13	354	4	-45	-1471	5	0	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTGCCCAGGTGT	7841	False	NA	13	True	AATAAA	-14	NA	82572659	82603752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82572876_82590949_82591052_82593296_82593333_82602236
ES.16988.1	chr18	+	2101	1	Antisense	novelGene_ENSMUSG00000041258.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTTTTGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	82639115	82641216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_82639100_82641200
ES.16989.1	chr18	-	9618	31	FSM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	3	-3562	3	0	multi-exon	TRUE	canonical	1	4	junction_23	19.2837294687055	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGTATATTTACTTCTT	NA	False	NA	4	True	AATAAA	-25	NA	82710856	82611717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.16989.10	chr18	-	4335	6	NIC	ENSMUSG00000041258.19	novel	9626	30	NA	NA	-1131	635	intron_retention	FALSE	canonical	0	0	junction_5	12.8903064354576	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGGCTCTATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	82637006	82614644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_82615880_82617071_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82636867
ES.16989.11	chr18	-	4575	19	ISM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	53195	-630	678	630	3prime_fragment	FALSE	canonical	1	5	junction_10	7.81024967590665	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAAGCTGGGCTCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	82657664	82614649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444
ES.16989.12	chr18	-	175	1	Intergenic	novelGene_14168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGAGAGATC	NA	False	NA	NA	False	NA	NA	NA	82661918	82661743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82661700_82661900
ES.16989.13	chr18	-	2532	4	NNC	ENSMUSG00000041258.19	novel	156	3	NA	NA	50	2454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6627904356076	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGAAATGTGTGCTTT	NA	False	NA	NA	False	TTTAAA	-5	NA	82710809	82696419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_82698602_82698716_82698882_82700269_82700413_82710767
ES.16989.14	chr18	-	3748	1	Intergenic	novelGene_14169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTGGCTTGCATTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	82709179	82705431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82705400_82709200
ES.16989.3	chr18	-	9568	32	NNC	ENSMUSG00000041258.19	novel	6170	32	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	19.3318680894875	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAACTCCCGTATAT	NA	False	NA	-5	True	AATAAA	-16	NA	82710854	82611726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639466_82639504_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.16989.4	chr18	-	7878	31	NIC	ENSMUSG00000041258.19	novel	6059	31	NA	NA	-11	17	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	19.3459728798183	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTATGTGTGGTTTT	NA	False	NA	NA	False	CATAAA	-40	NA	82711019	82613583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675266_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.16989.5	chr18	-	7969	32	NIC	ENSMUSG00000041258.19	novel	6170	32	NA	NA	17	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	19.5745061322778	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTATGTGTGGTTTT	NA	False	NA	NA	False	CATAAA	-40	NA	82710991	82613583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82628729_82628812_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.16989.7	chr18	-	7746	31	FSM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	4	-1691	4	12	multi-exon	FALSE	canonical	1	4	junction_23	19.2837294687055	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGGTGTATGTGTG	NA	False	NA	NA	False	CATAAA	-35	NA	82710855	82613588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.16989.8	chr18	-	3178	11	NNC	ENSMUSG00000041258.19	novel	9626	30	NA	NA	-3520	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.81019877474458	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTGGTGTATGTGTG	NA	False	NA	NA	False	CATAAA	-35	NA	82639395	82613588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_82614632_82615316_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215
ES.16989.9	chr18	-	7135	31	FSM	ENSMUSG00000041258.19	ENSMUST00000182122.8	6059	31	-160	-916	-11	-763	multi-exon	FALSE	canonical	1	4	junction_23	19.2837294687055	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGTGTATTGTATAT	NA	False	NA	NA	False	NA	NA	NA	82711019	82614363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82682962_82683107_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ES.1699.1	chr1	+	215	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACCAATCCCTGAACCA	NA	False	NA	NA	False	NA	NA	NA	157254200	157254415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_157254200_157254400
ES.16990.1	chr18	+	174	1	Intergenic	novelGene_14170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	82721556	82721730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82721600_82721700
ES.16991.1	chr18	+	159	1	Intergenic	novelGene_14171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82729792	82729951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82729800_82730000
ES.16992.1	chr18	-	189	1	Intergenic	novelGene_14172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	82749186	82748997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82749000_82749200
ES.16993.1	chr18	+	879	3	NNC	ENSMUSG00000118085.2	novel	1405	3	NA	NA	1224	24446	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGAGATTTTACTT	NA	False	NA	NA	False	TATAAA	-14	NA	82778066	82804972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82778480_82792732_82792910_82804683
ES.16993.2	chr18	+	2719	1	Genic_Genomic	ENSMUSG00000118085.2	novel	NA	NA	NA	NA	1224	259	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACTCTGATTCTTAAAACT	NA	False	NA	NA	False	NA	NA	NA	82778066	82780785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_82778100_82780800
ES.16993.3	chr18	+	3864	1	Intergenic	novelGene_14175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTTGAGATTTTAC	NA	False	NA	NA	False	TATAAA	-12	NA	82801106	82804970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82801100_82805000
ES.16994.1	chr18	-	2050	5	Antisense	novelGene_ENSMUSG00000118085.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACTTTGCCGTGTCTA	1929	False	NA	NA	False	AATATA	-22	NA	82785678	82779475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_82780804_82782505_82782795_82783453_82783657_82784659_82784793_82785581
ES.16995.1	chr18	-	317	1	Intergenic	novelGene_14173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAGAATATATGTAATA	2247	False	NA	NA	False	AATACA	-17	NA	82796528	82796211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82796200_82796500
ES.16995.2	chr18	-	192	1	Intergenic	novelGene_14174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATCAAACTTGGAA	2249	False	NA	NA	False	NA	NA	NA	82796526	82796334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82796300_82796500
ES.16996.1	chr18	-	1854	2	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTTTCTGTAAAGCGT	NA	False	NA	-4	True	AATAAA	-27	NA	82883966	82873426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_82875202_82883887
ES.16996.2	chr18	-	336	3	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	20	junction_2	4.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATTCTTCCTATATTT	NA	False	NA	-16	True	AATAAA	-15	NA	82883927	82873438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_82873610_82875076_82875202_82883887
ES.16996.3	chr18	-	5197	1	Antisense	novelGene_ENSMUSG00000097738.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGGACACAGAAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	82880040	82874843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_82874800_82880000
ES.16997.1	chr18	+	204	2	Intergenic	novelGene_14176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTCACTTA	NA	False	NA	NA	False	NA	NA	NA	82892080	82901352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82892106_82901173
ES.16998.1	chr18	-	172	1	Intergenic	novelGene_14177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	82893659	82893487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82893500_82893700
ES.16999.1	chr18	+	135	1	Intergenic	novelGene_14178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAACAAA	2792	False	NA	NA	False	NA	NA	NA	82914121	82914256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82914100_82914300
ES.17.1	chr1	-	155	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	4947635	4947480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4947500_4947600
ES.170.1	chr1	+	3186	1	Antisense	novelGene_ENSMUSG00000041779.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAAGCAAGGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	21064671	21067857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_21064700_21067900
ES.1700.1	chr1	-	171	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	157265439	157265268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157265300_157265400
ES.17000.1	chr18	+	5923	6	FSM	ENSMUSG00000058881.14	ENSMUST00000171238.8	7725	6	-35	1837	-35	1777	multi-exon	FALSE	canonical	2	3	junction_1	93.1866943291799	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAAGGTGTCGTCTGTGT	NA	False	NA	14	True	ATTAAA	-21	NA	82928968	83021602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82929118_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.10	chr18	+	7639	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	208	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	93.7259835904644	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTTACCCCTCTTTT	NA	False	NA	7	True	AATAAA	-21	NA	82932964	83023394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82933038_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.11	chr18	+	7700	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-34	-40	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCCCTCTTTTAGAAG	NA	False	NA	12	True	AATAAA	-26	NA	82935844	83023399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.12	chr18	+	5807	7	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-7	1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.8654565191672	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAAGGTGTCGTCTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	82935871	83021601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021196_83021263
ES.17000.13	chr18	+	6405	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-4	-1305	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGCAGCCGCTCACTC	NA	False	NA	8	True	AATAAA	-14	NA	82935874	83022134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.15	chr18	+	5863	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-1	1770	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGACACGAAGGTGTCG	NA	False	NA	7	True	ATTAAA	-14	NA	82935877	83021595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.17	chr18	+	6329	7	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	4	-1301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.8654565191672	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCGCTCACTCTGTG	NA	False	NA	12	True	AATAAA	-18	NA	82935882	83022138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021189_83021260
ES.17000.18	chr18	+	6191	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	25	-1490	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	82935903	83021949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.19	chr18	+	7641	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	3411	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.9367800161682	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	NA	False	NA	6	True	AATAAA	-20	NA	82939289	83023393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82939364_82973648_82975575_83004868_83006324_83011192_83011315_83012594_83012663_83019397
ES.17000.2	chr18	+	5714	4	NIC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15	1776	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	11.3137084989848	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAAGGTGTCGTCTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	82928988	83021601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_82929118_82973648_82975575_83004868_83006324_83019397
ES.17000.20	chr18	+	173	1	Intergenic	novelGene_14179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	82954419	82954592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_82954400_82954600
ES.17000.21	chr18	+	6509	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	33914	-1305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.9970212293985	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGCAGCCGCTCACTC	NA	False	NA	8	True	AATAAA	-14	NA	82969792	83022134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82969996_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.22	chr18	+	4655	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-16201	-1304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.7788685442656	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCAGCCGCTCACTCT	NA	False	NA	9	True	AATAAA	-15	NA	82989731	83022135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990006_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.23	chr18	+	5698	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-16015	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.7788685442656	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	NA	False	NA	6	True	AATAAA	-20	NA	82989917	83023393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82989977_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.24	chr18	+	6132	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15777	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	87.4885706821183	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTTTGACCTGTGGT	NA	False	NA	51	True	NA	NA	NA	82990155	83023438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990604_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.25	chr18	+	4291	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15770	1779	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	87.4885706821183	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGGTGTCGTCTGTGTTT	NA	False	NA	16	True	ATTAAA	-23	NA	82990162	83021604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990604_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.26	chr18	+	4786	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15746	-1304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	88.3487407946486	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCAGCCGCTCACTCT	NA	False	NA	9	True	AATAAA	-15	NA	82990186	83022135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990592_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.27	chr18	+	3732	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15746	1244	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	87.4885706821183	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTGTTATTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	82990186	83021069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990604_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.28	chr18	+	4042	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15711	1777	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	12	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAAGGTGTCGTCTGTGT	NA	False	NA	14	True	ATTAAA	-21	NA	82990221	83021602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990604_83004868_83006324_83019397
ES.17000.29	chr18	+	4678	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15623	-1301	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	87.4885706821183	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCGCTCACTCTGTG	NA	False	NA	12	True	AATAAA	-18	NA	82990309	83022138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990604_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.3	chr18	+	4248	3	NIC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-7	1773	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	0.5	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82928996	83021598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_82929118_82973648_82975575_83019397
ES.17000.30	chr18	+	5885	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15160	-1	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTTTGACCTGTGGT	NA	False	NA	51	True	NA	NA	NA	82990772	83023438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.31	chr18	+	4030	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15135	1783	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCGTCTGTGTTTTTCC	NA	False	NA	20	True	ATTAAA	-27	NA	82990797	83021608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.32	chr18	+	3832	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15131	1777	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAAGGTGTCGTCTGTGT	NA	False	NA	14	True	ATTAAA	-21	NA	82990801	83021602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019397
ES.17000.33	chr18	+	3897	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15130	1775	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGAAGGTGTCGTCTGT	NA	False	NA	12	True	ATTAAA	-19	NA	82990802	83021600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
ES.17000.34	chr18	+	4364	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15130	-1492	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTTCCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	82990802	83021947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.35	chr18	+	4557	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15128	-1297	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCACTCTGTGTGTC	NA	False	NA	16	True	AATAAA	-22	NA	82990804	83022142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.36	chr18	+	5798	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15128	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101.927363843082	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCCCTCTTTTAGAAG	NA	False	NA	12	True	AATAAA	-26	NA	82990804	83023399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990978_83004868_83006304_83011194_83011315_83012594_83012663_83019397
ES.17000.37	chr18	+	4172	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15124	-1490	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	82990808	83021949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019397
ES.17000.38	chr18	+	3156	5	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15068	-1302	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	87.2954752550211	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGCCGCTCACTCTGT	NA	False	NA	11	True	AATAAA	-17	NA	82990864	83022137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83004988_83011194_83011315_83012594_83012663_83019397
ES.17000.39	chr18	+	3884	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15065	1775	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.7180518612626	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGAAGGTGTCGTCTGT	NA	False	NA	12	True	ATTAAA	-19	NA	82990867	83021600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021196_83021263
ES.17000.4	chr18	+	6114	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-1344	1774	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.9970212293985	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACGAAGGTGTCGTCTG	NA	False	NA	11	True	ATTAAA	-18	NA	82931412	83021599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82931756_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.40	chr18	+	5657	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15034	-103	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAACATATTCACTCT	NA	False	NA	-51	True	ATTAAA	-9	NA	82990898	83023336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.42	chr18	+	3390	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15034	1244	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTGTTATTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	82990898	83021069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.44	chr18	+	5592	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-46	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	NA	False	NA	6	True	AATAAA	-20	NA	82990900	83023393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
ES.17000.45	chr18	+	3265	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	1241	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTGTTGTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	82990900	83021066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
ES.17000.46	chr18	+	4716	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-1042	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGTTGCTCACTGCTC	NA	False	NA	NA	False	AATAAA	-23	NA	82990900	83022397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.47	chr18	+	4270	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-1300	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCGCTCACTCTGTGT	NA	False	NA	13	True	AATAAA	-19	NA	82990900	83022139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019397
ES.17000.48	chr18	+	2588	5	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15032	1776	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	100.062480480947	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAAGGTGTCGTCTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	82990900	83021601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990978_83004868_83004988_83011194_83011315_83012594_83012663_83019397
ES.17000.49	chr18	+	3078	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	934	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTACTAGTTTTTTTTTA	NA	False	NA	NA	False	AATGAA	-27	NA	82990900	83020759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.5	chr18	+	5326	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-1338	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.9970212293985	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGAGCAGGTGTCTTTT	NA	False	NA	NA	False	TATAAA	-34	NA	82931418	83020157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82932416_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.50	chr18	+	5534	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-36	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCTTTTAGAAGGTGG	NA	False	NA	16	True	AATAAA	-30	NA	82990900	83023403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019397
ES.17000.51	chr18	+	3842	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	1773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.7180518612626	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82990900	83021598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021195_83021269
ES.17000.52	chr18	+	3051	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	922	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	87.7279174493502	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGCAAAAGCTTTACT	NA	False	NA	NA	False	AATGAA	-15	NA	82990900	83020747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011209_83011315_83012594_83012663_83019397
ES.17000.53	chr18	+	3714	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15029	1768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	100.5	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGGACACGAAGGTGT	NA	False	NA	5	True	ATTAAA	-12	NA	82990903	83021593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019404
ES.17000.54	chr18	+	5892	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15027	139	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAAATGGACAGCCCT	NA	False	NA	NA	False	AATAAA	-25	NA	82990905	83023578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.55	chr18	+	5637	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15024	-42	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	81.7180518612626	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACCCCTCTTTTAGA	NA	False	NA	10	True	AATAAA	-24	NA	82990908	83023397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021198_83021268
ES.17000.56	chr18	+	3806	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15021	1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.7180518612626	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAAGGTGTCGTCTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	82990911	83021601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83005680_83005782_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.57	chr18	+	2454	4	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15021	1776	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	98.9949493661167	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAAGGTGTCGTCTGTG	NA	False	NA	13	True	ATTAAA	-20	NA	82990911	83021601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83011194_83011315_83012594_83012663_83019397
ES.17000.58	chr18	+	3017	3	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15018	133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.5	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGGCCAAATGGAC	NA	False	NA	NA	False	AATAAA	-19	NA	82990914	83023572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83005078_83020823
ES.17000.59	chr18	+	5592	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15018	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.7180518612626	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTCTATTGGAATTTG	NA	False	NA	-40	True	ATTAAA	-20	NA	82990914	83023347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83021204_83021263
ES.17000.6	chr18	+	6022	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	-156	1837	-156	1777	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAAGGTGTCGTCTGTGT	NA	False	NA	14	True	ATTAAA	-21	NA	82932600	83021602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.61	chr18	+	3968	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15012	1775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.3226854118056	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGAAGGTGTCGTCTGT	NA	False	NA	12	True	ATTAAA	-19	NA	82990920	83021600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011125_83011315_83012594_83012663_83019397
ES.17000.62	chr18	+	4288	5	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	-15009	-111	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	87.2954752550211	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTATTTAGATAAAACATA	NA	False	NA	-59	True	ATTAAA	-1	NA	82990923	83023328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83004988_83011194_83011315_83012594_83012663_83019397
ES.17000.63	chr18	+	3827	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15002	1775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.7180518612626	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGAAGGTGTCGTCTGT	NA	False	NA	12	True	ATTAAA	-19	NA	82990930	83021600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397_83020420_83020481
ES.17000.64	chr18	+	4294	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-14990	-1302	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGCCGCTCACTCTGT	NA	False	NA	11	True	AATAAA	-17	NA	82990942	83022137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
ES.17000.65	chr18	+	3143	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-14982	1237	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTATTGTTGTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	82990950	83021062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82990974_83004868_83006324_83019397
ES.17000.66	chr18	+	5845	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-13920	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.7788685442656	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTACCCCTCTTTTAG	NA	False	NA	9	True	AATAAA	-23	NA	82992012	83023396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82992216_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.67	chr18	+	3877	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-13891	1770	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.5539897157334	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGACACGAAGGTGTCG	NA	False	NA	7	True	ATTAAA	-14	NA	82992041	83021595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_82992196_83004866_83006324_83012594_83012663_83019397
ES.17000.68	chr18	+	3163	5	NNC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	93	-1298	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	88.7788685442656	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGCTCACTCTGTGTGT	8941	False	NA	15	True	AATAAA	-21	NA	83006025	83022141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_83006324_83011194_83011315_83012594_83012663_83019397_83021202_83021268
ES.17000.69	chr18	+	8163	2	Genic_Genomic	ENSMUSG00000058881.14	novel	7725	6	NA	NA	7983	-1298	multi-exon	FALSE	non_canonical	0	0	junction_1	0	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGCTCACTCTGTGTGT	NA	False	NA	15	True	AATAAA	-21	NA	83013915	83022141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_+_83015324_83015386
ES.17000.7	chr18	+	6550	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	-147	1300	-147	-1300	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCGCTCACTCTGTGT	NA	False	NA	13	True	AATAAA	-19	NA	82932609	83022139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17000.70	chr18	+	4054	1	NIC	ENSMUSG00000058881.14	novel	7725	6	NA	NA	13407	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTTACCCCTCTTT	NA	False	NA	6	True	AATAAA	-20	NA	83019339	83023393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_83019300_83023400
ES.17000.8	chr18	+	7704	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	-4	3	-4	-3	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGTTTTGACCTGTG	NA	False	NA	49	True	NA	NA	NA	82932752	83023436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ES.17001.1	chr18	-	6783	2	Antisense	novelGene_ENSMUSG00000058881.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGAAAATTCATAAATCT	NA	False	NA	NA	False	NA	NA	NA	82971229	82964307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_82970922_82971060
ES.17002.1	chr18	-	178	1	Intergenic	novelGene_14180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAATCTCAG	NA	False	NA	NA	False	NA	NA	NA	82989486	82989308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_82989300_82989500
ES.17003.1	chr18	+	5008	2	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3418	264	intron_retention	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTCCTATATTTAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	83377127	83386534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_83377264_83381662
ES.17003.2	chr18	+	956	5	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3447	260	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.57071421427143	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGGTTCCTATATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	83377156	83386530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_83377264_83381662_83381799_83385018_83385238_83385879_83385988_83386144
ES.17003.3	chr18	+	907	4	NNC	ENSMUSG00000117783.2	novel	937	6	NA	NA	3457	-38	intron_retention	FALSE	canonical	1	1	junction_2	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGATGTCAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	83377166	83386232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_83377264_83381662_83381901_83385018_83385238_83385879
ES.17004.2	chr18	-	4933	2	NNC	ENSMUSG00000046982.12	novel	5656	2	NA	NA	634	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTCGTGGCTGTCAT	NA	False	NA	1	True	AATAAA	-25	NA	84103895	84029755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84034367_84103573
ES.17004.3	chr18	-	5303	3	NNC	ENSMUSG00000046982.12	novel	5656	2	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATTGTCGTGGCTGTCA	NA	False	NA	0	True	AATAAA	-24	NA	84105832	84029756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84034367_84103488_84104092_84105742
ES.17004.4	chr18	-	4970	3	NNC	ENSMUSG00000046982.12	novel	5656	2	NA	NA	618	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGATTGTCGTGGCTGT	NA	False	NA	-2	True	AATAAA	-22	NA	84103911	84029758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84034367_84103488_84103624_84103684
ES.17004.6	chr18	-	5495	2	FSM	ENSMUSG00000046982.12	ENSMUST00000060303.10	5656	2	-8	169	-8	-169	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	84104537	84029920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_84034367_84103488
ES.17004.7	chr18	-	2719	2	NNC	ENSMUSG00000046982.12	novel	5656	2	NA	NA	-184	-45845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAAATCCATTTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	84106015	84079836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84080029_84103488
ES.17005.1	chr18	+	3615	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	-153	-32	-153	32	multi-exon	FALSE	canonical	3	35	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTGCATGCTGGTTTT	4101	False	NA	NA	False	NA	NA	NA	84106034	84115685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106499_84112534
ES.17005.2	chr18	+	3118	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	5	307	5	-307	multi-exon	FALSE	canonical	3	35	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTTAGTTGCTTGC	4259	False	NA	NA	False	ATTAAA	-19	NA	84106192	84115346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106499_84112534
ES.17005.3	chr18	+	4535	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	49	-1154	49	1154	multi-exon	FALSE	canonical	3	35	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTGTCCCCTTGGAGT	4303	False	NA	NA	False	AATAAA	-13	NA	84106236	84116807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106499_84112534
ES.17005.4	chr18	+	1250	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	59	2121	59	-681	multi-exon	FALSE	canonical	3	35	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAAGTATAGTGTT	4313	False	NA	NA	False	AATGAA	-35	NA	84106246	84113532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106499_84112534
ES.17005.5	chr18	+	3237	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	59	134	59	-134	multi-exon	FALSE	canonical	3	35	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATCTGATGGATCC	4313	False	NA	NA	False	AATAAA	-13	NA	84106246	84115519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106499_84112534
ES.17005.6	chr18	+	3745	2	FSM	ENSMUSG00000049090.4	ENSMUST00000235383.2	1789	2	-516	-1440	92	0	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	4346	False	NA	NA	False	NA	NA	NA	84106279	84115653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106906_84112534
ES.17005.7	chr18	+	2986	2	FSM	ENSMUSG00000049090.4	ENSMUST00000235383.2	1789	2	-79	-1118	-79	-322	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTATATGTCTGAAA	4783	False	NA	NA	False	AATAAA	-31	NA	84106716	84115331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84106906_84112534
ES.17006.1	chr18	-	2212	1	Intergenic	novelGene_14181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTCACAGCCCAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	84142179	84139967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84140000_84142200
ES.17007.1	chr18	+	1767	1	Intergenic	novelGene_14183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	84266389	84268156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84266400_84268200
ES.17008.1	chr18	+	7673	1	Intergenic	novelGene_14185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAAAAGCAAGGCTGAA	NA	False	NA	NA	False	NA	NA	NA	84422707	84430380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84422700_84430400
ES.17009.1	chr18	+	171	1	Intergenic	novelGene_14187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	84480571	84480742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84480600_84480700
ES.1701.1	chr1	-	159	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	157273108	157272949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157272900_157273100
ES.17010.1	chr18	+	943	1	Intergenic	novelGene_14188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84485830	84486773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84485800_84486800
ES.17011.1	chr18	+	2160	1	Antisense	novelGene_ENSMUSG00000048410.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAGACCTACAACTGAT	NA	False	NA	NA	False	NA	NA	NA	84607675	84609835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_84607700_84609800
ES.17012.1	chr18	-	3045	7	NIC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.7540843131393	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGGTGTACTAAGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	84607600	84225825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84607562
ES.17012.10	chr18	-	5488	7	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	3	135103	3	-62984	5prime_fragment	FALSE	canonical	3	22	junction_2	3.1446603773522	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACATTTTTCAGAACA	NA	False	NA	NA	False	ATTAAA	-19	NA	84607626	84360928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
ES.17012.11	chr18	-	6375	5	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	4	145589	4	-73470	5prime_fragment	FALSE	canonical	3	24	junction_3	2.8613807855649	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTACGTTTGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	84607625	84371414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
ES.17012.12	chr18	-	7528	1	Intergenic	novelGene_14184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAATCAGCATTGTA	NA	False	NA	NA	False	NA	NA	NA	84418069	84410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84410500_84418100
ES.17012.13	chr18	-	3177	1	Intergenic	novelGene_14186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAACCTTCAGGAATCCA	NA	False	NA	NA	False	NA	NA	NA	84435270	84432093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84432100_84435300
ES.17012.14	chr18	-	5198	2	ISM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	1	350214	1	-5006	5prime_fragment	FALSE	canonical	3	30	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTGAAATTTTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84607628	84576039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_-_84581172_84607562
ES.17012.15	chr18	-	3797	1	Intergenic	novelGene_14189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGCCATGCCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	84607346	84603549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84603500_84607300
ES.17012.2	chr18	-	8129	9	FSM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	-220	0	1	0	multi-exon	FALSE	canonical	3	22	junction_4	5.699506557589	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGGTGTACTAAGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	84607849	84225825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
ES.17012.3	chr18	-	4952	8	NNC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	-1756	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.279760181432	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTGGTGGTGTACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	84578306	84225829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84228207_84333930_84334110_84361091_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451
ES.17012.5	chr18	-	7895	9	NNC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	11.3019633250157	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGGTGGTGGTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	84607628	84225833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571101_84576447_84581172_84607562
ES.17012.6	chr18	-	3187	8	NIC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	-6	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	11.3820481640241	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGGTGGTGGTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	84607635	84225833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84607562
ES.17012.7	chr18	-	3039	7	NNC	ENSMUSG00000048410.18	novel	7909	9	NA	NA	-18317	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.7540843131393	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTAAAGGTGGTGGTG	NA	False	NA	NA	False	AATAAA	-10	NA	84471377	84225835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84471335
ES.17012.9	chr18	-	5017	1	Intergenic	novelGene_14182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAGCCACCTTTATTA	5331	False	NA	NA	False	AAAACA	-38	NA	84237929	84232912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84232900_84237900
ES.17013.1	chr18	-	4214	11	NIC	ENSMUSG00000024644.18	novel	2124	12	NA	NA	-24	0	intron_retention	FALSE	canonical	3	418	junction_10	64.8327849162752	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	False	NA	2	True	AATAAA	-25	NA	84703776	84685589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ES.17013.10	chr18	-	5043	9	NIC	ENSMUSG00000024644.18	novel	2152	11	NA	NA	38	-1	intron_retention	FALSE	canonical	3	554	junction_7	38.3175465681194	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAACTGCCGTGGTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	84700146	84685596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84689039_84690198_84690284_84693101_84695533_84696832_84696996_84699059_84699204_84699962
ES.17013.2	chr18	-	2142	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	-20	2	-20	-2	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCGTGGTCTGACTTT	NA	False	NA	0	True	AATAAA	-23	NA	84703847	84685591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ES.17013.3	chr18	-	4943	10	NIC	ENSMUSG00000024644.18	novel	2124	12	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	418	junction_9	67.9811157511072	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCGTGGTCTGACTTT	NA	False	NA	0	True	AATAAA	-23	NA	84703783	84685591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84686226_84686662_84686811_84687055_84688087_84688877_84689039_84690198_84690284_84693101_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ES.17013.6	chr18	-	3231	7	NNC	ENSMUSG00000024644.18	novel	1956	10	NA	NA	983	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	228.515073657929	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCCGTGGTCTGAC	NA	False	NA	-3	True	AATAAA	-20	NA	84692350	84685594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690742_84690909
ES.17013.7	chr18	-	2249	13	NNC	ENSMUSG00000024644.18	novel	2124	12	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	226.228068304728	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCCGTGGTCTGAC	NA	False	NA	-3	True	AATAAA	-20	NA	84703882	84685594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84702476_84702552_84703727
ES.17013.8	chr18	-	1857	10	NIC	ENSMUSG00000024644.18	novel	2152	11	NA	NA	131	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	192.281686370752	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCCGTGGTCTGAC	NA	False	NA	-3	True	AATAAA	-20	NA	84700053	84685594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84699059_84699204_84699962
ES.17014.1	chr18	-	115	1	Intergenic	novelGene_14190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGACACTCTGTAA	9119	False	NA	NA	False	NA	NA	NA	84711659	84711544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84711500_84711700
ES.17015.1	chr18	+	181	1	Intergenic	novelGene_14191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAAAAGA	468	False	NA	NA	False	NA	NA	NA	84713005	84713186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84713000_84713200
ES.17016.1	chr18	+	6162	4	FSM	ENSMUSG00000118075.2_ENSMUSG00000047992.12	ENSMUST00000161429.3	1387	4	148	-4923	-75	4074	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTACCAACGCTGGCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	84738291	84762635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84738487_84748154_84748815_84754936_84755102_84757493
ES.17017.1	chr18	-	1862	1	Intergenic	novelGene_14192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84807235	84805373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84805400_84807200
ES.17018.1	chr18	+	178	1	Intergenic	novelGene_14193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84810606	84810784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84810600_84810800
ES.17019.1	chr18	-	5293	13	NNC	ENSMUSG00000117781.2	novel	2073	11	NA	NA	-1871	5537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.24845626053867	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGGATTTTATTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	84856712	84811145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84813036_84813089_84814476_84815746_84815833_84816769_84817778_84826376_84826561_84828001_84828088_84828196_84828294_84835151_84835262_84842978_84843021_84851830_84851888_84853493_84853573_84854707_84854875_84856611
ES.17019.2	chr18	-	5333	11	NNC	ENSMUSG00000117781.2	novel	2073	11	NA	NA	-1916	5537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.1540659228538	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGGATTTTATTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	84856757	84811145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_84814476_84815746_84815833_84816769_84817778_84826376_84826561_84828001_84828088_84828196_84828294_84835151_84835262_84841541_84841619_84842978_84843021_84854707_84854875_84856611
ES.17019.3	chr18	-	3131	1	Intergenic	novelGene_14194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTTTTAAAAAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	84849444	84846313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84846300_84849400
ES.1702.1	chr1	-	389	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	157279780	157279391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157279400_157279800
ES.17020.1	chr18	+	4703	4	NNC	ENSMUSG00000024646.15	novel	1182	6	NA	NA	-17	-29017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTGTCATCGCTCTT	5029	False	NA	NA	False	NA	NA	NA	84856811	84862690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84857412_84858293_84858916_84859001_84861314_84861521
ES.17021.1	chr18	+	832	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	0	1	0	-1	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGTCTGTTTGGTG	NA	False	NA	18	True	AATATA	-23	NA	84869462	84897995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ES.17021.2	chr18	+	7095	3	FSM	ENSMUSG00000024646.15	ENSMUST00000159846.2	773	3	-41	-6281	-11	1	multi-exon	FALSE	canonical	3	973	junction_1	30	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATATGTGTCTGTCTG	NA	False	NA	11	True	AATATA	-16	NA	84869490	84897988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84869733_84889629_84889759_84891264
ES.17021.3	chr18	+	790	4	NNC	ENSMUSG00000024646.15	novel	1001	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	473.452801824591	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATATGTGTCTGTCTGTT	NA	False	NA	13	True	AATATA	-18	NA	84869491	84897990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84869733_84889629_84889759_84891264_84891295_84897600
ES.17021.4	chr18	+	930	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	31	-128	-8	128	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTTCTTGTCTTAATT	NA	False	NA	NA	False	AGTAAA	-18	NA	84869493	84898124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ES.17021.5	chr18	+	5441	4	NIC	ENSMUSG00000024646.15	novel	1001	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	946	junction_3	36.3593179253957	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATATGTGTCTGTCTGTT	NA	False	NA	13	True	AATATA	-18	NA	84869505	84897990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84869733_84889629_84889759_84891264_84895987_84897627
ES.17021.6	chr18	+	3349	1	NIC	ENSMUSG00000024646.15	novel	833	5	NA	NA	2	-18818	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTTTTTTTTTAACA	NA	False	NA	NA	False	NA	NA	NA	84869540	84872889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84869500_84872900
ES.17021.7	chr18	+	2749	6	NNC	ENSMUSG00000024646.15	novel	623	2	NA	NA	10917	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	502.504925348996	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATATGTGTCTGTCTG	4412	False	NA	11	True	AATATA	-16	NA	84884010	84897988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84885528_84885740_84886418_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ES.17022.1	chr18	+	176	1	Intergenic	novelGene_14195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCAGAGCGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	84923710	84923886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84923700_84923900
ES.17023.1	chr18	+	181	1	Intergenic	novelGene_14196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	84925748	84925929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84925700_84925900
ES.17024.1	chr18	+	1960	12	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-2274	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	322.60904364466	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTGTCTTATTTTCT	NA	False	NA	29	True	AATAAA	-18	NA	84950632	84999601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84950763_84951400_84951528_84953116_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.10	chr18	+	5071	11	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-121	3244	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	254.973351548745	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATATGTTTTTTTTT	679	False	NA	NA	False	AATAAA	-17	NA	84952785	85002842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246_85000488_85000691
ES.17024.13	chr18	+	1479	8	NIC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-109	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	289.611985319697	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGAGTCTTGTTATTA	937	False	NA	1	True	AATAAA	-13	NA	84953043	84999514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84983555_84983711_84995491_84995617_84999246
ES.17024.14	chr18	+	1364	7	NIC	ENSMUSG00000034391.13	novel	2532	10	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	310.690449733421	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	980	False	NA	25	True	AATAAA	-14	NA	84953086	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84995491_84995617_84999246
ES.17024.15	chr18	+	1692	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	266.536959195688	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	1010	False	NA	25	True	AATAAA	-14	NA	84953116	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980839_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.16	chr18	+	1708	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-33	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	266.255284535744	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCTTATTTTCTAA	1013	False	NA	31	True	AATAAA	-20	NA	84953119	84999603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84953306_84975444_84975556_84976390_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.17	chr18	+	526	4	ISM	ENSMUSG00000034391.13	ENSMUST00000037718.10	1437	10	-64	22085	-64	-1295	5prime_fragment	FALSE	canonical	3	723	junction_3	49.8285950924656	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAAGAGTCCCTCAG	1112	False	NA	NA	False	NA	NA	NA	84953218	84977416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193
ES.17024.18	chr18	+	1827	1	Antisense	novelGene_ENSMUSG00000024645.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTAGTTAGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84963581	84965408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_84963600_84965400
ES.17024.19	chr18	+	2285	4	NIC	ENSMUSG00000034391.13	novel	2532	10	NA	NA	-3121	0	intron_retention	FALSE	canonical	3	769	junction_2	78.2403703694937	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	84980513	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84980846_84982233_84983711_84995491_84995617_84999246
ES.17024.2	chr18	+	2144	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-231	-3	-231	3	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTGTCTTATTTTCT	569	False	NA	29	True	AATAAA	-18	NA	84952675	84999601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.20	chr18	+	2946	1	Intergenic	novelGene_14198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATCCTTCAGGGGT	NA	False	NA	NA	False	NA	NA	NA	84987427	84990373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_84987400_84990400
ES.17024.21	chr18	+	817	2	ISM	ENSMUSG00000034391.13	ENSMUST00000223789.3	1557	10	24910	-96	11516	0	3prime_fragment	FALSE	canonical	3	958	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	84995150	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_84995617_84999246
ES.17024.22	chr18	+	3658	1	NIC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	12305	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	84995939	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84995900_84999600
ES.17024.3	chr18	+	1713	11	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-229	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	245.728081423349	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGTGTCTTATTTT	571	False	NA	27	True	AATAAA	-16	NA	84952677	84999599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84952762_84953188_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.4	chr18	+	2031	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	267.932873480202	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	627	False	NA	25	True	AATAAA	-14	NA	84952733	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983660_84995491_84995617_84999246
ES.17024.5	chr18	+	2120	10	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-172	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	266.058055485807	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	628	False	NA	25	True	AATAAA	-14	NA	84952734	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980679_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.6	chr18	+	3320	9	NIC	ENSMUSG00000034391.13	novel	2532	10	NA	NA	-172	0	intron_retention	FALSE	canonical	3	723	junction_3	70.6053069889226	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTGGTGTCTTATT	628	False	NA	25	True	AATAAA	-14	NA	84952734	84999597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84983711_84995491_84995617_84999246
ES.17024.7	chr18	+	1720	11	NNC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-168	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	252.370442009361	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCTGTTTGGTGTCTTA	632	False	NA	23	True	AATAAA	-12	NA	84952738	84999595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_84952762_84953116_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17024.8	chr18	+	1932	9	NIC	ENSMUSG00000034391.13	novel	1910	10	NA	NA	-149	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	272.187779850602	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTTTGGTGTCTTAT	651	False	NA	24	True	AATAAA	-13	NA	84952757	84999596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84999246
ES.17024.9	chr18	+	5278	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	-123	-3245	-123	3245	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATATGTTTTTTTTTT	677	False	NA	NA	False	AATAAA	-18	NA	84952783	85002843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ES.17025.1	chr18	-	2849	1	Intergenic	novelGene_14197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCATGGCTCTTGCAGC	NA	False	NA	NA	False	NA	NA	NA	84957148	84954299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_84954300_84957100
ES.17026.1	chr18	-	8049	1	Genic_Genomic	ENSMUSG00000024645.6	novel	NA	NA	NA	NA	75	6266	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAACTTCCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	84966098	84958049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr18_-_84958000_84966100
ES.17026.2	chr18	-	1327	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	0	1091	0	0	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGCATTTTTATTTAC	NA	False	NA	NA	False	AATAAA	-20	NA	84969649	84965406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ES.17026.3	chr18	-	2632	3	NIC	ENSMUSG00000024645.6	novel	2499	4	NA	NA	-35	0	intron_retention	FALSE	canonical	3	61	junction_2	2.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATGTTAAAAGCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	84969684	84965414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84965871_84965958_84967578_84969127
ES.17026.4	chr18	-	492	1	NIC	ENSMUSG00000024645.6	novel	2418	6	NA	NA	75	56	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCATGAAATGT	NA	False	NA	NA	False	NA	NA	NA	84966098	84965606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_84965600_84966100
ES.17026.5	chr18	-	1007	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	66	1345	47	2	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAGTGCAGTGTGAGT	NA	False	NA	NA	False	AGTAAA	-14	NA	84969583	84965660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ES.17027.1	chr18	-	3483	1	Antisense	novelGene_ENSMUSG00000034391.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-38	NA	84976775	84973292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_84973300_84976800
ES.17028.1	chr18	-	4762	1	Antisense	novelGene_ENSMUSG00000034391.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTGATCCAAGGCAAGA	NA	False	NA	NA	False	NA	NA	NA	84996319	84991557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_84991600_84996300
ES.17029.1	chr18	-	375	1	Intergenic	novelGene_14199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	AATAAA	-44	NA	85158553	85158178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_85158200_85158600
ES.1703.1	chr1	+	1213	8	FSM	ENSMUSG00000033488.12	ENSMUST00000193791.6	778	8	-3	-432	-3	0	multi-exon	FALSE	canonical	1	1	junction_7	18.9725903258746	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286143	157316630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157316012
ES.1703.2	chr1	+	3681	8	NNC	ENSMUSG00000033488.12	novel	1618	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_1	17.2022779697033	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286143	157316630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_157286202_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157293392_157294735_157294818_157298185_157299987_157316012
ES.1703.3	chr1	+	1395	9	NIC	ENSMUSG00000033488.12	novel	1618	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	18.214005600087	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286143	157316630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157316012
ES.1703.4	chr1	+	1925	8	NIC	ENSMUSG00000033488.12	novel	1618	10	NA	NA	-3	262	intron_retention	FALSE	canonical	0	0	junction_2	18.8441513689613	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATGCATACATTGGAA	NA	False	NA	NA	False	AATATA	-23	NA	157286143	157316892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_157286423_157289522_157289620_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
ES.1703.5	chr1	+	2305	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	1	-688	1	688	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGTGTTACTGTTA	NA	False	NA	NA	False	NA	NA	NA	157286150	157317318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
ES.1703.6	chr1	+	1618	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	1	-1	1	1	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	157286150	157316631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
ES.1703.7	chr1	+	1122	7	FSM	ENSMUSG00000033488.12	ENSMUST00000119891.7	1125	7	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_6	19.7624784770422	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286152	157316630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157316012
ES.1703.8	chr1	+	6768	5	ISM	ENSMUSG00000033488.12	ENSMUST00000193791.6	778	8	179	16468	176	1474	intron_retention	FALSE	canonical	3	40	junction_2	8.5146931829632	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTCCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	157286325	157299730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281
ES.1703.9	chr1	+	1568	2	ISM	ENSMUSG00000033488.12	ENSMUST00000194220.2	1202	4	105	2672	105	906	5prime_fragment	FALSE	canonical	3	43	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGTGTGAAGATAAA	NA	False	NA	NA	False	AATATA	-18	NA	157299942	157317536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_157299987_157316012
ES.17030.1	chr18	-	176	1	Intergenic	novelGene_14200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCAGCTTTAC	NA	False	NA	NA	False	NA	NA	NA	85730181	85730005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_85730000_85730200
ES.17031.1	chr18	-	177	1	Intergenic	novelGene_14201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTGATATCTATA	NA	False	NA	NA	False	NA	NA	NA	86003890	86003713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_86003700_86003900
ES.17032.1	chr18	-	247	1	Intergenic	novelGene_14202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGCACAGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	88849852	88849605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_88849600_88849900
ES.17033.1	chr18	+	2546	1	Antisense	novelGene_ENSMUSG00000056153.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	88887878	88890424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_+_88887900_88890400
ES.17034.1	chr18	-	3374	4	FSM	ENSMUSG00000056153.16	ENSMUST00000237549.2	3417	4	43	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.2999940454922	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCACTCAGGTTCCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	88912340	88869505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88872626_88905115_88905190_88905332_88905458_88912285
ES.17034.10	chr18	-	4293	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	28	-1507	-2	1186	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTGCAAATGGTAAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	88912448	88885111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.11	chr18	-	4295	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-31	-3260	-2	1184	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTTGCAAATGGTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	88912465	88885113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
ES.17034.12	chr18	-	3500	3	NIC	ENSMUSG00000056153.16	novel	2814	4	NA	NA	-21	337	intron_retention	FALSE	canonical	3	149	junction_1	36.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGATTTCTCCATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	88912361	88885960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_88889043_88905115_88905458_88912285
ES.17034.13	chr18	-	3212	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	38	-436	-4	115	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCTGATACCAGAAATA	NA	False	NA	NA	False	ATTAAA	-36	NA	88912438	88886182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.14	chr18	-	3150	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-9	2895	8	110	multi-exon	FALSE	canonical	3	70	junction_1	76	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATGTCTGATACCAG	NA	False	NA	NA	False	ATTAAA	-31	NA	88912455	88886187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17034.15	chr18	-	3135	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	51	-2182	0	106	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAAACTATGTCTGATA	NA	False	NA	NA	False	ATTAAA	-27	NA	88912383	88886191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
ES.17034.17	chr18	-	3045	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-32	3023	-2	-18	multi-exon	FALSE	canonical	3	70	junction_1	76	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTTTCTTCTGTA	NA	False	NA	NA	False	TATAAA	-39	NA	88912478	88886315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17034.18	chr18	-	3108	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-51	-2053	-9	-23	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-45	NA	88912485	88886320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
ES.17034.19	chr18	-	3095	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	8	-289	-5	-32	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATTTTAAAGTTGTCTT	NA	False	NA	NA	False	ATTAAA	-36	NA	88912468	88886329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.2	chr18	-	2252	4	FSM	ENSMUSG00000056153.16	ENSMUST00000237549.2	3417	4	8	1157	8	-1157	multi-exon	FALSE	canonical	0	0	junction_1	93.2999940454922	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTGGTGTGATTA	NA	False	NA	NA	False	AATAAA	-17	NA	88912375	88870662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88872626_88905115_88905190_88905332_88905458_88912285
ES.17034.21	chr18	-	3001	5	NNC	ENSMUSG00000056153.16	novel	2814	4	NA	NA	1	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.0754869150337	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGATCTGAATAGAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	88912462	88886348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_88888508_88888576_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.22	chr18	-	2854	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-40	-1810	2	55	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTCTGTAAAGCCCAA	NA	False	NA	50	True	ATTAAA	-25	NA	88912474	88886563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
ES.17034.23	chr18	-	2811	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	11	-8	-2	8	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCCTTTTCTGTCATT	NA	False	NA	3	True	ATTAAA	-33	NA	88912465	88886610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.24	chr18	-	2805	1	NIC	ENSMUSG00000056153.16	novel	6036	3	NA	NA	16046	8	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCCTTTTCTGTCATT	4932	False	NA	3	True	ATTAAA	-33	NA	88889415	88886610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_88886600_88889400
ES.17034.27	chr18	-	2750	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-38	3324	-8	2	multi-exon	FALSE	canonical	3	70	junction_1	76	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAATTGTTGCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-27	NA	88912484	88886616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17034.29	chr18	-	2939	3	NIC	ENSMUSG00000056153.16	novel	2814	4	NA	NA	1	-4	intron_retention	FALSE	canonical	3	149	junction_1	36.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTAGAAATTGTTGCC	NA	False	NA	-9	True	ATTAAA	-21	NA	88912462	88886622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_-_88889043_88905115_88905458_88912285
ES.17034.3	chr18	-	6067	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-32	1	-2	-1	multi-exon	FALSE	canonical	3	70	junction_1	76	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTTGTCATCAGTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88912478	88883293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17034.30	chr18	-	2708	4	NNC	ENSMUSG00000056153.16	novel	2814	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.2999940454922	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTAGAAATTGTTGCC	NA	False	NA	-9	True	ATTAAA	-21	NA	88912383	88886622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_-_88889043_88905124_88905190_88905332_88905458_88912285
ES.17034.31	chr18	-	2628	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	13	173	0	-173	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAATCTGCAACATCT	NA	False	NA	NA	False	GATAAA	-4	NA	88912463	88886791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.4	chr18	-	6132	4	FSM	ENSMUSG00000056153.16	ENSMUST00000145120.3	1004	4	-48	-5080	-6	-1	multi-exon	FALSE	canonical	3	33	junction_2	77.821733611005	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTTGTCATCAGTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88912482	88883293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905177_88905332_88905458_88912285
ES.17034.5	chr18	-	6128	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	11	-3325	-2	-1	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTTGTCATCAGTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88912465	88883293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ES.17034.8	chr18	-	4904	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-16	1148	1	-1148	multi-exon	FALSE	canonical	3	70	junction_1	76	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAGAAAAACTATCTG	NA	False	NA	NA	False	NA	NA	NA	88912462	88884440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17034.9	chr18	-	4252	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	-21	1805	-4	1200	multi-exon	FALSE	canonical	3	70	junction_1	76	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATTGCCAATATTTT	NA	False	NA	NA	False	AATAAA	-39	NA	88912467	88885097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_-_88889043_88905332_88905458_88912285
ES.17035.1	chr18	+	7303	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	-33	1	-33	-1	multi-exon	TRUE	canonical	3	17	junction_17	5.75166038828982	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAAAGTGTATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	88989880	89149139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.10	chr18	+	7097	50	NIC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	216	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	7.78929091089987	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATTTTTAAAAGTGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	88990147	89149135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89005305_89005371_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.11	chr18	+	6964	49	NNC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	217	-67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	6.62195291561837	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGCAATGTATTTTGTA	NA	False	NA	NA	False	TATAAA	-15	NA	88990148	89149070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113777_89119762_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.12	chr18	+	7100	49	NNC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.00185987196735	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATTTTTAAAAGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	88990161	89149134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_88990286_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.13	chr18	+	7244	49	NNC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	232	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.00185987196735	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAAAGTGTATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	88990163	89149139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_88990427_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.14	chr18	+	5829	40	NIC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	79	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	7.36518097953306	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTAAAAGTGTATT	9489	False	NA	NA	False	AATAAA	-17	NA	89004096	89149136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.16	chr18	+	4255	30	NNC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	5315	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	7.57255825501295	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAAAAGTGTATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	89045124	89149138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148849
ES.17035.17	chr18	+	4439	22	NIC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	1495	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	8.26543769666558	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATACA	-15	NA	89055192	89133024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448
ES.17035.18	chr18	+	2968	1	Intergenic	novelGene_14204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGTACTTAACAATAT	NA	False	NA	NA	False	NA	NA	NA	89075245	89078213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_89075200_89078200
ES.17035.19	chr18	+	3656	17	NIC	ENSMUSG00000023066.11	novel	2844	20	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_14	9.49259579883184	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	89082360	89149137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89146879_89146984_89147873_89147944_89148722
ES.17035.20	chr18	+	5156	13	NIC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	-12902	-1	intron_retention	FALSE	canonical	3	25	junction_10	5.71729831301464	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTAAAAGTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	89106849	89149136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.21	chr18	+	2245	12	ISM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	123427	10	-6411	-7	3prime_fragment	FALSE	canonical	3	25	junction_9	5.90839156700797	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTATATTTTTAAAAG	NA	False	NA	NA	False	AATAAA	-11	NA	89113340	89149130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.22	chr18	+	1129	1	Intergenic	novelGene_14205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTAAATTATG	NA	False	NA	NA	False	NA	NA	NA	89136147	89137276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_89136100_89137300
ES.17035.23	chr18	+	6786	3	ISM	ENSMUSG00000023066.11	ENSMUST00000236676.2	2844	20	58345	0	14452	0	3prime_fragment	FALSE	canonical	3	37	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAAAAGTGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	89140682	89149137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_89146984_89147873_89147944_89148722
ES.17035.3	chr18	+	2032	13	FSM	ENSMUSG00000023066.11	ENSMUST00000235272.2	3260	13	5	1223	5	-1223	multi-exon	FALSE	canonical	3	19	junction_9	4.44331582892276	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTAATATTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	88989936	89029080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975
ES.17035.4	chr18	+	1922	14	NNC	ENSMUSG00000023066.11	novel	3260	13	NA	NA	204	-1223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.4779283376305	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGATGTAATATTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	88990135	89029080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89021350_89021440_89027365_89027579_89028975
ES.17035.5	chr18	+	7431	44	ISM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	228	16117	210	1	5prime_fragment	FALSE	canonical	3	17	junction_17	5.59639457451311	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTTTTGTTTTGTT	NA	False	NA	NA	False	AATACA	-14	NA	88990141	89133023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448
ES.17035.6	chr18	+	3050	13	FSM	ENSMUSG00000023066.11	ENSMUST00000235272.2	3260	13	210	0	210	0	multi-exon	FALSE	canonical	3	19	junction_9	4.44331582892276	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	88990141	89030303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975
ES.17035.7	chr18	+	8683	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	228	-1640	210	1640	multi-exon	FALSE	canonical	3	17	junction_17	5.75166038828982	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTGATATGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	88990141	89150780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.8	chr18	+	9296	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	230	-2255	212	2255	multi-exon	FALSE	canonical	3	17	junction_17	5.75166038828982	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTAGAGGTCTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	88990143	89151395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17035.9	chr18	+	6745	47	NIC	ENSMUSG00000023066.11	novel	7271	49	NA	NA	215	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	8.10050291327737	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTAAAAGTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	88990146	89149136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ES.17036.1	chr18	-	176	1	Intergenic	novelGene_14203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	89016742	89016566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_89016600_89016700
ES.17037.1	chr18	-	2645	1	Antisense	novelGene_ENSMUSG00000023066.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89085997	89083352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr18_-_89083400_89086000
ES.17038.1	chr18	-	112	1	Intergenic	novelGene_14206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTAAGCACCAATAGCT	NA	False	NA	NA	False	NA	NA	NA	89243869	89243757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_89243800_89243900
ES.17039.1	chr18	+	179	1	Intergenic	novelGene_14207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	89969301	89969480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_89969300_89969500
ES.1704.1	chr1	-	174	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATATCTTTTTGTT	500	False	NA	NA	False	NA	NA	NA	157331897	157331723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_157331700_157331900
ES.17040.1	chr18	-	3444	1	Intergenic	novelGene_14208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACGACAACAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	90173947	90170503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_90170500_90173900
ES.17041.1	chr18	-	5394	1	Intergenic	novelGene_14209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCAAGGAGCTAAAGGG	NA	False	NA	NA	False	NA	NA	NA	90447565	90442171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_-_90442200_90447600
ES.17042.1	chr18	+	215	1	Intergenic	novelGene_14210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGGCTCTCAATATT	NA	False	NA	NA	False	NA	NA	NA	90472707	90472922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_90472700_90472900
ES.17043.1	chr18	+	4650	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	-42	3	-42	-3	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCTACCTTTAATATG	4700	False	NA	22	True	AATAAA	-22	NA	90528235	90561388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.10	chr18	+	6664	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-20	-9	intron_retention	FALSE	canonical	0	0	junction_12	56.6629850744824	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATAATTGCTACCTTT	4765	False	NA	16	True	AATAAA	-16	NA	90528300	90561382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90551714_90552563_90555198_90556692_90558062
ES.17043.11	chr18	+	4577	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.8725391753977	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGCATAATTGCTA	4786	False	NA	11	True	AATAAA	-11	NA	90528321	90561377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535493_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.12	chr18	+	4243	13	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.1597789685397	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4786	False	NA	14	True	AATAAA	-14	NA	90528321	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541697_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90558062
ES.17043.13	chr18	+	4152	18	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	3	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	69.5887573944911	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCATTGCATAATT	4795	False	NA	7	True	AATAAA	-7	NA	90528330	90561373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90558368_90558557_90558647_90558844
ES.17043.14	chr18	+	4500	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	4	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	55.6583968764565	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4796	False	NA	14	True	AATAAA	-14	NA	90528331	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.15	chr18	+	3138	14	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	4	-1232	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	58.5085843092261	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATAGTTTTCTTT	4796	False	NA	27	True	AATAAA	-26	NA	90528331	90560159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90556622_90556692_90558062
ES.17043.16	chr18	+	3412	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	4	-1064	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	56.1940878581019	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTCTTTTTGAGGA	4796	False	NA	39	True	ATTAAA	-12	NA	90528331	90560327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.17	chr18	+	3607	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	8	-906	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	55.7137820490054	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAATTGATCCTCT	4800	False	NA	NA	False	NA	NA	NA	90528335	90560485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.18	chr18	+	4494	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	9	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	55.7137820490054	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCATTGCATAATT	4801	False	NA	7	True	AATAAA	-7	NA	90528336	90561373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.19	chr18	+	4317	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.2699126501067	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4801	False	NA	14	True	AATAAA	-14	NA	90528336	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90558406_90558629
ES.17043.2	chr18	+	3204	18	Fusion	ENSMUSG00000024614.8_ENSMUSG00000110277.3	novel	4611	16	NA	NA	-38	-2	multi-exon	FALSE	canonical	0	0	junction_15	61.773780845922	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTCTTGGTCATAG	4704	False	NA	7	True	NA	NA	NA	90528239	90610650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90607079_90607207_90607397_90607459_90608954
ES.17043.20	chr18	+	3411	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	9	-1001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.2699126501067	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTTGCTCACTCATG	4801	False	NA	102	True	CATAAA	-9	NA	90528336	90560390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90559047_90559186
ES.17043.21	chr18	+	8815	13	NIC	ENSMUSG00000024614.8	novel	3520	14	NA	NA	11	13	intron_retention	FALSE	canonical	3	189	junction_12	16.4966326530262	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTTTTCAGAAATTT	4803	False	NA	38	True	AATAAA	-38	NA	90528338	90561404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198
ES.17043.22	chr18	+	4012	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	62	537	12	-537	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGAAGCGATCATTT	4804	False	NA	NA	False	AGTAAA	-21	NA	90528339	90560854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.23	chr18	+	4175	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	12	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.2699126501067	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4804	False	NA	14	True	AATAAA	-14	NA	90528339	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90560751_90561113
ES.17043.24	chr18	+	3501	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	22	-992	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	55.6583968764565	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTCATGTGCTTTTCT	4814	False	NA	111	True	CATAAA	-18	NA	90528349	90560399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.25	chr18	+	4625	17	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	71.5339735720028	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCTACCTTTAATATG	4827	False	NA	22	True	AATAAA	-22	NA	90528362	90561388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90551714_90551817_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.28	chr18	+	3482	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-14	-1056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.0127766441484	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGAGGATATTTTTA	4846	False	NA	47	True	ATTAAA	-20	NA	90528381	90560335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548185_90548283_90551106_90551165_90551311_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.29	chr18	+	3438	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-12	-1063	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	55.0169266882677	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTCTTTTTGAGGAT	4848	False	NA	40	True	ATTAAA	-13	NA	90528383	90560328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535636_90537226_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.3	chr18	+	4286	18	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-26	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	69.5887573944911	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATAATTGCTACCTTT	4716	False	NA	16	True	AATAAA	-16	NA	90528251	90561382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90559752_90559872_90560610_90560830
ES.17043.30	chr18	+	4283	14	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	12	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	58.5085843092261	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4872	False	NA	14	True	AATAAA	-14	NA	90528407	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90556622_90556692_90558062
ES.17043.31	chr18	+	2746	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	130	1735	12	915	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAATTGCTAATTATAG	4872	False	NA	NA	False	ATTAAA	-20	NA	90528407	90559656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.32	chr18	+	4881	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	32	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	85.5215112640608	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCATTGCATAATT	4892	False	NA	7	True	AATAAA	-7	NA	90528427	90561373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90549122_90549691_90551106_90551165_90551344_90551399_90552505_90552563_90556622_90556692_90558062
ES.17043.33	chr18	+	4269	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	32	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.2699126501067	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGCATAATTGCTA	4892	False	NA	11	True	AATAAA	-11	NA	90528427	90561377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90559273_90559450
ES.17043.34	chr18	+	3263	15	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	33	-1063	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	56.3380829620314	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTCTTTTTGAGGAT	4893	False	NA	40	True	ATTAAA	-13	NA	90528428	90560328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90558127
ES.17043.35	chr18	+	4514	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	34	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	72.070027673707	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATAATTGCTACCTTT	4894	False	NA	16	True	AATAAA	-16	NA	90528429	90561382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535708_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548185_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.36	chr18	+	8378	14	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	35	-10	intron_retention	FALSE	canonical	3	190	junction_5	15.2342653330145	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCATAATTGCTACCTT	4895	False	NA	15	True	AATAAA	-15	NA	90528430	90561381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90556692_90558062
ES.17043.37	chr18	+	4248	16	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	85.3810803919047	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAATTGCTACCTTTAAT	4895	False	NA	19	True	AATAAA	-19	NA	90528430	90561385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548182_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555298_90558062_90559764_90559868
ES.17043.39	chr18	+	3573	16	NNC	ENSMUSG00000024614.8	novel	647	7	NA	NA	188	-1058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0282230772852	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGAGGATATTTT	5048	False	NA	45	True	ATTAAA	-18	NA	90528583	90560333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528828_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.4	chr18	+	3394	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	-15	1232	-15	-1232	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATAGTTTTCTTT	4727	False	NA	27	True	AATAAA	-26	NA	90528262	90560159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.40	chr18	+	4519	16	NNC	ENSMUSG00000024614.8	novel	647	7	NA	NA	297	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0282230772852	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCTACCTTTAATATG	5157	False	NA	22	True	AATAAA	-22	NA	90528692	90561388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528828_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.41	chr18	+	7149	1	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-953	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATCATTGCATAATT	NA	False	NA	7	True	AATAAA	-7	NA	90554224	90561373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90554200_90561400
ES.17043.42	chr18	+	3414	2	ISM	ENSMUSG00000024614.8	ENSMUST00000236081.2	465	3	186	-1841	186	-1243	3prime_fragment	FALSE	canonical	3	221	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCATTGTATTCTGAAA	NA	False	NA	16	True	AATAAA	-15	NA	90555363	90560148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr18_+_90556692_90558062
ES.17043.43	chr18	+	199	1	Intergenic	novelGene_14211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAACTCTT	NA	False	NA	NA	False	NA	NA	NA	90595095	90595294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_90595100_90595300
ES.17043.44	chr18	+	2033	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	-26	-4	-26	-2	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTCTTGGTCATAG	NA	False	NA	7	True	NA	NA	NA	90597874	90610650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
ES.17043.45	chr18	+	4280	3	FSM	ENSMUSG00000110277.3	ENSMUST00000209969.3	1929	3	-18	-2333	1	2333	multi-exon	FALSE	canonical	0	0	junction_2	46.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATCCAAGTGGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	90597901	90612985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90598024_90607079_90607207_90608954
ES.17043.46	chr18	+	4343	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	1	-2341	1	2335	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATCCAAGTGGTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	90597901	90612987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
ES.17043.47	chr18	+	1370	3	FSM	ENSMUSG00000110277.3	ENSMUST00000209821.2	513	3	-38	-819	-9	-672	multi-exon	FALSE	canonical	3	89	junction_2	2	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTAGACTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	90597910	90608527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90598024_90607079_90607207_90607397
ES.17043.48	chr18	+	5134	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	12	-3143	-7	3137	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGTCTTTTCTAAGGT	NA	False	NA	5	True	AATAAA	-18	NA	90597912	90613789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
ES.17043.49	chr18	+	854	1	NIC	ENSMUSG00000110277.3	novel	2003	4	NA	NA	-3	-8938	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGGCCTCTAACAAACT	NA	False	NA	NA	False	AAAAAG	-10	NA	90597916	90598770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90597900_90598800
ES.17043.5	chr18	+	3116	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	-13	1508	-13	1142	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGCTTCATGGTAGTG	4729	False	NA	NA	False	AATAAA	-15	NA	90528264	90559883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.50	chr18	+	3402	1	Intergenic	novelGene_14212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTCGCCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	90613189	90616591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr18_+_90613200_90616600
ES.17043.6	chr18	+	3442	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	-2	-1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.2699126501067	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAACTTAAAATTT	4740	False	NA	91	True	NA	NA	NA	90528275	90560379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062_90558750_90558908
ES.17043.7	chr18	+	5160	17	NNC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	70.8518480704632	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGCATAATTGCTACCT	4750	False	NA	14	True	AATAAA	-14	NA	90528285	90561380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90549122_90549691_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.8	chr18	+	3317	15	NIC	ENSMUSG00000024614.8	novel	4611	16	NA	NA	14	-1233	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	55.6583968764565	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAAATAGTTTTCTT	4757	False	NA	26	True	AATAAA	-25	NA	90528292	90560158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17043.9	chr18	+	3602	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	18	991	17	-991	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCATGTGCTTTTCTT	4760	False	NA	112	True	CATAAA	-19	NA	90528295	90560400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ES.17044.1	chr19	+	898	3	Antisense	novelGene_ENSMUSG00000100969.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGGCTGAGGGCCATAA	NA	False	NA	NA	False	NA	NA	NA	3217573	3222836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3217687_3220977_3221587_3222660
ES.17045.1	chr19	-	268	1	Intergenic	novelGene_14213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATTAGGACGGTTGAGA	NA	False	NA	NA	False	NA	NA	NA	3256749	3256481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3256500_3256700
ES.17046.1	chr19	+	4615	6	Antisense	novelGene_ENSMUSG00000024831.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCCCCACCCACAAGG	NA	False	NA	NA	False	NA	NA	NA	3315617	3325571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3315664_3316333_3316457_3317238_3317336_3318296_3318416_3318658_3318845_3321527
ES.17047.1	chr19	-	5478	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	208	-117	170	117	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGTAGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	3332809	3308958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.10	chr19	-	3925	14	NNC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	10	-3	intron_retention	FALSE	canonical	1	4	junction_2	16.4435559580152	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATTTGCTTGTGTTGGA	NA	False	NA	-3	True	ATTAAA	-14	NA	3332969	3310926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3311636_3311974_3312145_3315516_3315666_3316335_3316460_3317241_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.11	chr19	-	3694	15	NNC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1054651727309	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATATTTGCTTGTGTT	NA	False	NA	-6	True	ATTAAA	-11	NA	3332960	3310929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318453_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.2	chr19	-	2994	15	NNC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	16	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGTTGGAGGTGA	NA	False	NA	2	True	ATTAAA	-19	NA	3332994	3310921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3311636_3311974_3312145_3315516_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.3	chr19	-	7557	13	NIC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	18	1	intron_retention	FALSE	canonical	3	46	junction_2	8.20018631224654	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTGTTGGAGGTG	NA	False	NA	1	True	ATTAAA	-18	NA	3332999	3310922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3311636_3311974_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.4	chr19	-	4706	14	NIC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	165	1	intron_retention	FALSE	canonical	3	43	junction_2	8.90581885440388	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTGTTGGAGGTG	NA	False	NA	1	True	ATTAAA	-18	NA	3332814	3310922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.5	chr19	-	3723	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	-1	1847	-1	1	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTGTTGGAGGTG	NA	False	NA	1	True	ATTAAA	-18	NA	3333018	3310922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.8	chr19	-	3680	16	NNC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	71	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.5030079094101	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGCTTGTGTTGGAGG	NA	False	NA	-1	True	ATTAAA	-16	NA	3332908	3310924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3311636_3311974_3312145_3312347_3312417_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17047.9	chr19	-	6197	13	NIC	ENSMUSG00000024831.15	novel	5569	15	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	43	junction_2	9.11462499990476	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGCTTGTGTTGGAG	NA	False	NA	-2	True	ATTAAA	-15	NA	3332988	3310925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ES.17048.1	chr19	+	822	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	-18	-2	-13	2	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTTGCTGTTAAAGC	7353	False	NA	15	True	NA	NA	NA	3333041	3341203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ES.17048.10	chr19	+	2287	6	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	1	1	intron_retention	FALSE	canonical	2	5	junction_2	731.130521863231	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCCTGTGACTTGCTG	7376	False	NA	8	True	NA	NA	NA	3333064	3341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3333172_3334759_3334834_3335309_3337039_3337702_3337756_3338983_3339088_3340976
ES.17048.11	chr19	+	2682	6	FSM	ENSMUSG00000024829.13	ENSMUST00000139844.8	674	6	11	-2019	2	3	multi-exon	FALSE	canonical	3	1812	junction_5	40.5935955539787	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGACTTGCTGTT	7377	False	NA	10	True	NA	NA	NA	3333065	3341198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983
ES.17048.12	chr19	+	4653	4	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	2	3	intron_retention	FALSE	canonical	3	1812	junction_3	37.8623236946117	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGACTTGCTGTT	7377	False	NA	10	True	NA	NA	NA	3333065	3341198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3333172_3334759_3337039_3337702_3337756_3338983
ES.17048.13	chr19	+	2524	5	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	349	1	intron_retention	FALSE	canonical	3	1715	junction_4	67.2992384800898	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCCTGTGACTTGCTG	7724	False	NA	8	True	NA	NA	NA	3333412	3341196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ES.17048.14	chr19	+	108	1	Intergenic	novelGene_14214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAATGCCAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	3365109	3365217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3365100_3365200
ES.17048.15	chr19	+	3800	16	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	-475	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9843948117771	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATCATCTGTCCCTGT	NA	False	NA	14	True	AATAAA	-16	NA	3371858	3435729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3371902_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.16	chr19	+	4505	19	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	-475	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1591672493185	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3371858	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3372136_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.17	chr19	+	4262	19	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	-469	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1591672493185	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCATCTGTCCCTGTCT	NA	False	NA	16	True	AATAAA	-18	NA	3371864	3435731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3371902_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.18	chr19	+	4312	20	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	-453	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.347323737169	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCATCTGTCCCTGTCT	NA	False	NA	16	True	AATAAA	-18	NA	3371880	3435731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3371902_3372069_3372136_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.19	chr19	+	4358	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	-34	-7	-34	7	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTGTCTCCCTTGTCA	NA	False	NA	25	True	AATAAA	-27	NA	3373250	3435740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.2	chr19	+	795	7	NNC	ENSMUSG00000024829.13	novel	802	7	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	702.209370487179	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGCCTGTGACTTGC	7354	False	NA	6	True	NA	NA	NA	3333042	3341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340993
ES.17048.20	chr19	+	4368	20	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-24	62925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	84.9690835089715	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3373260	3498658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754_3435726_3498623
ES.17048.21	chr19	+	3849	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	10	458	10	-458	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGGCCAAAGTTTTTTT	NA	False	NA	NA	False	AATACA	-19	NA	3373294	3435275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.22	chr19	+	6571	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	13	-2267	13	2267	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGGCACAGGATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	3373297	3438000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.23	chr19	+	4259	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	113.976389151221	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATCATCTGTCCCTG	NA	False	NA	13	True	AATAAA	-15	NA	3373297	3435728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418869_3419051_3420731_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.25	chr19	+	4376	20	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.904787388401	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3373305	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3424681_3424763_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.27	chr19	+	4125	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.2747895379238	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTACATCATCTGTCCCT	NA	False	NA	12	True	AATAAA	-14	NA	3373329	3435727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406348_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.28	chr19	+	4476	18	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	230	junction_1	38.3912655868024	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3373332	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3432025_3433754
ES.17048.29	chr19	+	6048	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	87.2770528295799	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTACATCATCTGTCCCT	NA	False	NA	12	True	AATAAA	-14	NA	3373332	3435727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3423307_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.31	chr19	+	4191	18	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-14	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	88.2494890542665	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3373333	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.32	chr19	+	3661	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	51	605	-12	-605	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCCTTTGGCCTTGCTTG	NA	False	NA	NA	False	TTTAAA	-20	NA	3373335	3435128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.33	chr19	+	3533	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	62	722	-1	-722	multi-exon	FALSE	canonical	3	230	junction_1	37.3718386086055	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTTTGGTATTCCAT	NA	False	NA	NA	False	AATAGA	-10	NA	3373346	3435011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.34	chr19	+	4247	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.2583258611966	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3373346	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412093_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.35	chr19	+	4446	20	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	111.101361221967	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTACATCATCTGTCCCT	NA	False	NA	12	True	AATAAA	-14	NA	3373346	3435727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3428880_3429078_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.39	chr19	+	4099	18	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	86.4567015660136	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3373347	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3373375_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.4	chr19	+	1956	5	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1715	junction_4	73.987752364834	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGCCTGTGACTTGC	7366	False	NA	6	True	NA	NA	NA	3333054	3341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3333172_3334759_3335396_3336874_3337756_3338983_3339088_3340976
ES.17048.40	chr19	+	4270	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	86.3047285659338	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3373347	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421556_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.41	chr19	+	4481	20	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	110.464744755035	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373347	3435733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3426754_3426982_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.42	chr19	+	4045	17	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	89.8841050673032	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCATCTGTCCCTGTCT	NA	False	NA	16	True	AATAAA	-18	NA	3373347	3435731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3433754
ES.17048.43	chr19	+	4255	19	NNC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.2507384382774	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3373353	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419057_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.46	chr19	+	4362	19	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	2253	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	83.0670003263021	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATCATCTGTCCCTG	NA	False	NA	13	True	AATAAA	-15	NA	3375600	3435728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3375741_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.47	chr19	+	4996	19	NNC	ENSMUSG00000024900.6	novel	839	6	NA	NA	2267	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1591672493185	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATCATCTGTCCCTGT	NA	False	NA	14	True	AATAAA	-16	NA	3375614	3435729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3376388_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.48	chr19	+	180	1	Intergenic	novelGene_14215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATTAATAATAAAA	3765	False	NA	NA	False	NA	NA	NA	3381401	3381581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3381400_3381600
ES.17048.49	chr19	+	4227	18	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	25903	1	7561	-1	3prime_fragment	FALSE	canonical	3	314	junction_9	25.902665825853	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	9601	False	NA	17	True	AATAAA	-19	NA	3399187	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.5	chr19	+	812	7	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	685.826609930592	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGAGCCTGTGACTTG	7369	False	NA	5	True	NA	NA	NA	3333057	3341193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3333172_3334759_3334834_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ES.17048.50	chr19	+	3506	18	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	25903	722	7561	-722	3prime_fragment	FALSE	canonical	3	314	junction_9	25.902665825853	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTTTGGTATTCCAT	9601	False	NA	NA	False	AATAGA	-10	NA	3399187	3435011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.51	chr19	+	177	1	ISM	ENSMUSG00000024900.6	ENSMUST00000235968.2	2513	2	28084	66	9805	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTATTATGCTGG	NA	False	NA	NA	False	NA	NA	NA	3401431	3401608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3401400_3401600
ES.17048.52	chr19	+	4077	17	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	29194	2	10852	-2	3prime_fragment	FALSE	canonical	3	314	junction_8	26.6996459480271	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCATCTGTCCCTGTCT	NA	False	NA	16	True	AATAAA	-18	NA	3402478	3435731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.53	chr19	+	4115	15	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	34538	-1	-8507	1	3prime_fragment	FALSE	canonical	3	314	junction_6	28.0196723895253	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTGTCCCTGTCTCCC	NA	False	NA	19	True	AATAAA	-21	NA	3407822	3435734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.54	chr19	+	5575	13	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	39134	5	-3911	-5	3prime_fragment	FALSE	canonical	3	314	junction_4	26.5952167796308	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATCATCTGTCCCTG	NA	False	NA	13	True	AATAAA	-15	NA	3412418	3435728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.55	chr19	+	4657	12	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	-2442	-1	intron_retention	FALSE	canonical	3	314	junction_3	27.7777483930056	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3413887	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3414556_3415674_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.56	chr19	+	3249	10	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	45567	1	2522	-1	3prime_fragment	FALSE	canonical	3	314	junction_1	29.8812464413533	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGTCCCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	3418851	3435732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.57	chr19	+	5021	7	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	51806	-2263	51	2263	3prime_fragment	FALSE	canonical	3	335	junction_5	23.7182536362936	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGATGGCACAGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	3425090	3437996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.58	chr19	+	1814	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	13	407	13	127	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTCCATTCAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	3438869	3457416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
ES.17048.6	chr19	+	6552	2	FSM	ENSMUSG00000024829.13_ENSMUSG00000099261.3	ENSMUST00000155870.2	678	2	-2	-5872	-2	2	multi-exon	FALSE	canonical	3	1903	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCTGTGACTTGCTGT	7369	False	NA	9	True	NA	NA	NA	3333057	3341197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3333172_3334759
ES.17048.7	chr19	+	4827	24	Fusion	ENSMUSG00000024900.6_ENSMUSG00000024829.13	novel	1138	7	NA	NA	-2	5	multi-exon	TRUE	canonical	0	0	junction_6	597.667438237753	761	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCTGTCTCCCTTGT	7369	False	NA	23	True	AATAAA	-25	NA	3333057	3435738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_3333172_3334759_3334834_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ES.17048.8	chr19	+	2700	6	NIC	ENSMUSG00000024829.13	novel	802	7	NA	NA	0	-1	intron_retention	FALSE	canonical	2	5	junction_2	745.926966934431	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGCCTGTGACTTGC	7371	False	NA	6	True	NA	NA	NA	3333059	3341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3333172_3334759_3334834_3335309_3335396_3336874_3337039_3337702_3337756_3338983
ES.17048.9	chr19	+	804	7	NNC	ENSMUSG00000024829.13	novel	802	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	700.348583841567	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGCCTGTGACTTGC	7376	False	NA	6	True	NA	NA	NA	3333064	3341194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340962
ES.17049.1	chr19	-	1558	2	Antisense	novelGene_ENSMUSG00000024900.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTCAAGCTCGCCT	NA	False	NA	NA	False	AATATA	-27	NA	3373953	3371432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_3372690_3373652
ES.1705.1	chr1	+	4676	28	NNC	ENSMUSG00000026589.15	novel	4661	28	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.823189287810847	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGTCTCTGGCTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	157334341	157395992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_157334431_157334955_157335124_157352354_157352424_157356733_157357075_157358849_157358963_157359622_157359744_157360648_157360749_157362198_157362344_157362930_157363083_157363421_157363484_157365087_157365224_157365682_157365914_157371435_157371534_157373768_157373851_157378576_157378695_157380502_157380615_157382316_157382423_157384334_157384476_157385604_157385719_157387018_157387092_157388252_157388547_157389085_157389154_157392016_157392167_157392330_157392430_157392931_157393100_157393222_157393303_157394197_157394297_157394845
ES.17050.1	chr19	-	179	1	Intergenic	novelGene_14216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	3497992	3497813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3497800_3498000
ES.17051.1	chr19	+	177	1	Intergenic	novelGene_14217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTTATACATA	NA	False	NA	NA	False	NA	NA	NA	3551020	3551197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3551000_3551200
ES.17052.1	chr19	+	3517	1	Antisense	novelGene_ENSMUSG00000024908.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGTTCTGGAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	3563721	3567238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3563700_3567200
ES.17053.1	chr19	+	2687	1	Antisense	novelGene_ENSMUSG00000024908.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAGGACTAGAAGACTAG	NA	False	NA	NA	False	NA	NA	NA	3592091	3594778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3592100_3594800
ES.17054.1	chr19	+	779	1	Intergenic	novelGene_14219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3604110	3604889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3604100_3604900
ES.17055.1	chr19	+	184	1	Intergenic	novelGene_14220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTGAGAAACCATC	NA	False	NA	NA	False	AATAGA	-7	NA	3605540	3605724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3605500_3605700
ES.17056.1	chr19	+	160	1	Intergenic	novelGene_14221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	3612568	3612728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3612600_3612700
ES.17057.1	chr19	+	177	1	Intergenic	novelGene_14222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3616061	3616238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3616100_3616200
ES.17057.2	chr19	+	338	1	Intergenic	novelGene_14223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3616063	3616401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3616100_3616400
ES.17058.1	chr19	-	4846	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-5	37	combination_of_known_splicesites	FALSE	canonical	2	7	junction_22	109.007060579571	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGAGCCTCTGCCAAAAA	NA	False	NA	NA	False	TATAAA	-38	NA	3625754	3504890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3625640
ES.17058.10	chr19	-	4728	22	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	104.600590087781	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625755	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.100	chr19	-	1780	6	ISM	ENSMUSG00000024908.16	ENSMUST00000223919.2	2237	14	15	33192	0	527	5prime_fragment	FALSE	canonical	3	145	junction_5	129.618825793169	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAAATCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3625722	3560967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.101	chr19	-	1150	1	NIC	ENSMUSG00000024908.16	novel	509	4	NA	NA	-6484	-321	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACTTTGTAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	3578231	3577081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3577100_3578200
ES.17058.102	chr19	-	180	1	Intergenic	novelGene_14218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTATATGGCT	NA	False	NA	NA	False	NA	NA	NA	3587040	3586860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3586900_3587000
ES.17058.11	chr19	-	7203	1	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	8875	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	9678	False	NA	NA	False	AATAAA	-24	NA	3512130	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3504900_3512100
ES.17058.12	chr19	-	4891	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	-50	0	-21	0	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625770	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.13	chr19	-	4945	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	103.075705839036	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625755	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523849_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.14	chr19	-	4475	20	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	164.899650505518	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625753	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3571733_3571921_3576701_3576935_3625640
ES.17058.16	chr19	-	4252	20	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	146.955172466577	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625715	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3594107_3594256_3625640
ES.17058.17	chr19	-	5289	27	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	189.426196772433	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625723	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3517682_3517848_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561178_3561265_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3600838_3600946_3625640
ES.17058.18	chr19	-	4707	22	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	137.627335390583	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625714	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568403_3571733_3571921_3576701_3576935_3625640
ES.17058.19	chr19	-	4767	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_22	133.982274947099	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625730	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523849_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3625640
ES.17058.20	chr19	-	6379	5	ISM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	104703	0	-12	0	intron_retention	FALSE	canonical	3	424	junction_4	27.0231382337433	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	791	False	NA	NA	False	AATAAA	-24	NA	3521017	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140
ES.17058.22	chr19	-	6184	20	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	3419	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	115.937321876426	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	7404	False	NA	NA	False	AATAAA	-24	NA	3568328	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3517682_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244
ES.17058.23	chr19	-	4821	23	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	104.980212618009	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625751	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.24	chr19	-	4982	24	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	147.141162626678	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625754	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3600838_3600946_3625640
ES.17058.25	chr19	-	4398	20	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	175.486391735116	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625716	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534839_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3576683_3576935_3625640
ES.17058.26	chr19	-	4165	22	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.414853437091	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625781	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3506548_3514630_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523849_3534839_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.28	chr19	-	4698	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	111.614411522456	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625723	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3594107_3594256_3625640
ES.17058.29	chr19	-	4742	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	112.921286488194	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625721	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3576701_3576935_3594107_3594256_3625640
ES.17058.3	chr19	-	4543	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	112.689044994081	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCGTGAGCCTTTTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	3625715	3504926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3625640
ES.17058.30	chr19	-	4287	19	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	144.348525844846	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTCGTGAGCCTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	3625749	3504928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3576701_3576935_3594107_3594256_3625640
ES.17058.31	chr19	-	4882	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	109.149643208195	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTCGTGAGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	3625722	3504929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576889_3594107_3594256_3625640
ES.17058.32	chr19	-	4809	23	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_9	133.920700910021	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625714	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523849_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3594107_3594256_3625640
ES.17058.33	chr19	-	4870	23	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-11554	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	149.919765042549	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3583301	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3577570_3577676_3583146
ES.17058.34	chr19	-	4940	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	110.835902818072	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625714	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546673_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.35	chr19	-	4101	19	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	150.317811467718	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3625640
ES.17058.36	chr19	-	4805	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	138.051373836633	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521980_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.37	chr19	-	4407	20	NIC	ENSMUSG00000024908.16	novel	4633	22	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	153.146662637513	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.38	chr19	-	4672	22	FSM	ENSMUSG00000024908.16	ENSMUST00000172362.3	4633	22	-37	-2	-4	2	multi-exon	FALSE	canonical	2	8	junction_9	119.716123030186	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625753	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.39	chr19	-	7236	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	2	intron_retention	FALSE	canonical	3	249	junction_8	68.9378687809981	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625722	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.4	chr19	-	4980	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	-23	-5	-23	0	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625772	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.40	chr19	-	4535	2	ISM	ENSMUSG00000024908.16	ENSMUST00000225475.2	1025	8	9231	-1803	9231	2	intron_retention	FALSE	canonical	3	467	junction_1	0	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3511774	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3507052_3509360
ES.17058.42	chr19	-	4868	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	146.722517578118	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3509801_3509898_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.43	chr19	-	4729	22	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	137.502521106551	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625714	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523877_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.46	chr19	-	4824	23	NNC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	105.698317382637	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534839_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.47	chr19	-	4666	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	123.071794764953	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625722	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.48	chr19	-	4641	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	140.624328670607	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625736	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3576701_3576935_3594107_3594256_3625640
ES.17058.49	chr19	-	4764	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-37	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	112.471331696192	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625786	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.5	chr19	-	4917	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625760	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.50	chr19	-	4747	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	153.591144501958	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625715	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534839_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.51	chr19	-	4765	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	135.787844975076	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625716	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523849_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.52	chr19	-	4756	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	134.225294754998	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCGTGAGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	3625716	3504930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.53	chr19	-	4631	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	133.605778813012	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625711	3504931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3594107_3594256_3625640
ES.17058.55	chr19	-	4267	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.441992935284	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625715	3504931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3506548_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.56	chr19	-	4687	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.128634777685	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTCCTCGTGAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	3625703	3504931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509365_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519656_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.58	chr19	-	4938	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	135.020715346864	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625715	3504932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523883_3528277_3528365_3534826_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.60	chr19	-	4541	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	114.337686595294	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625758	3504932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3594107_3594256_3625640
ES.17058.61	chr19	-	4730	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_18	126.838283311383	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625752	3504932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.63	chr19	-	4816	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	112.726832843717	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625727	3504932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.64	chr19	-	5027	25	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	135.137481436087	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625717	3504932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3600838_3600946_3625640
ES.17058.66	chr19	-	4528	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.404462349046	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625715	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3506548_3506788_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.67	chr19	-	6048	9	ISM	ENSMUSG00000024908.16	ENSMUST00000172362.3	4633	22	98858	1	-5853	-1	3prime_fragment	FALSE	canonical	3	397	junction_7	38.5338730858968	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	6564	False	NA	NA	False	AATAAA	-18	NA	3526858	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768
ES.17058.68	chr19	-	4893	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_10	108.574053722687	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625700	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534839_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.69	chr19	-	5012	25	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	151.404718846174	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625754	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3600838_3600946_3625640
ES.17058.7	chr19	-	4769	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	114.748638336148	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625760	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.71	chr19	-	4644	22	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	126.410266812295	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625704	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.73	chr19	-	4931	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	109.396211958762	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTTCCTCGTGAGCC	NA	False	NA	NA	False	AATAAA	-18	NA	3625714	3504933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544054_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.74	chr19	-	4739	22	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	134.755476878503	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAACTTCCTCGTGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3625716	3504934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576930_3594107_3594256_3625640
ES.17058.75	chr19	-	5678	17	ISM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	66672	2	-12547	-2	3prime_fragment	FALSE	canonical	3	249	junction_9	67.508535339985	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAACTTCCTCGTGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3559077	3504934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241
ES.17058.77	chr19	-	4614	22	NNC	ENSMUSG00000024908.16	novel	4633	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	148.996415972966	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAACTTCCTCGTGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3625715	3504934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568260_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.78	chr19	-	4790	24	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	122.38978298537	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAACTTCCTCGTGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3625721	3504934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3505199_3505243_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.79	chr19	-	4781	23	NNC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	139.721860662916	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAACTTCCTCGTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	3625715	3504935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571714_3571921_3576701_3576930_3625640
ES.17058.8	chr19	-	5109	5	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	-1208	0	intron_retention	FALSE	canonical	0	0	junction_1	209.268219039586	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3522213	3504927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3514544_3514696_3516492_3516600_3517140_3517295_3519640
ES.17058.80	chr19	-	4184	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	35	733	2	-733	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAACAAGTTTTTTAGA	NA	False	NA	NA	False	TTTAAA	-24	NA	3625714	3505665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.81	chr19	-	3787	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	801	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	104.980212618009	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTGTATATAGTGAT	NA	False	NA	NA	False	NA	NA	NA	3625722	3505932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.82	chr19	-	3857	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	33	1062	0	739	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTTACTGTAC	NA	False	NA	NA	False	NA	NA	NA	3625716	3505994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.83	chr19	-	3313	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-5	305	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTCTGTATTGTT	NA	False	NA	NA	False	AAGAAA	-36	NA	3625754	3506428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.86	chr19	-	3449	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	-5	1508	-5	293	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAATTGGTAACTGTT	NA	False	NA	NA	False	AAGAAA	-24	NA	3625754	3506440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.87	chr19	-	3322	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	4	1515	0	291	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTCAATTGGTAACTG	NA	False	NA	NA	False	AAGAAA	-22	NA	3625716	3506442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.88	chr19	-	3335	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	2	270	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGTTTTTTTATAA	NA	False	NA	NA	False	AAGAAA	-1	NA	3625714	3506463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.89	chr19	-	3219	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-6	261	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	114.748638336148	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAATACTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	3625755	3506472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.90	chr19	-	2954	22	NIC	ENSMUSG00000024908.16	novel	4841	23	NA	NA	2	73	combination_of_known_junctions	FALSE	canonical	3	106	junction_9	104.600590087781	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTGTATTCGAAACAT	NA	False	NA	NA	False	TATAAA	-13	NA	3625714	3506660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.91	chr19	-	3136	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	-29	1734	0	72	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTATTGTATTCGAAACA	NA	False	NA	NA	False	TATAAA	-12	NA	3625749	3506661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.92	chr19	-	2999	24	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-67	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	100.351876189837	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTTTTGCGTATGTTT	NA	False	NA	NA	False	AAAACA	-22	NA	3625715	3506800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.93	chr19	-	2893	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	1	-76	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCAAGAATTTTTTTG	NA	False	NA	NA	False	AAAACA	-13	NA	3625715	3506809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.94	chr19	-	4740	13	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	-1	1768	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	130.672937774685	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTCTATTCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	3625723	3531759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.95	chr19	-	4889	14	ISM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	-10	26827	-10	1768	5prime_fragment	FALSE	canonical	3	325	junction_13	62.0625757893553	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTCTATTCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	3625759	3531759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ES.17058.96	chr19	-	4712	13	ISM	ENSMUSG00000024908.16	ENSMUST00000223919.2	2237	14	7	3984	7	1768	5prime_fragment	FALSE	canonical	3	145	junction_12	96.128241890138	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTCTATTCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	3625730	3531759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ES.17058.98	chr19	-	4873	6	ISM	ENSMUSG00000024908.16	ENSMUST00000225446.2	5112	13	67663	-19	-11503	19	3prime_fragment	FALSE	canonical	3	407	junction_5	35.8909459334802	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGAAAATGTCCACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	3558033	3533508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241
ES.17058.99	chr19	-	1839	1	Antisense	novelGene_ENSMUSG00000114315.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	554	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3539323	3537484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_3537500_3539300
ES.17059.1	chr19	+	10097	2	Antisense	novelGene_ENSMUSG00000024913.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAACAAACAAAATAAGAA	4621	False	NA	NA	False	NA	NA	NA	3656662	3667004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3657288_3657532
ES.1706.1	chr1	-	177	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAATTTACATG	NA	False	NA	NA	False	NA	NA	NA	158007221	158007044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_158007000_158007200
ES.17060.1	chr19	+	2479	2	Antisense	novelGene_ENSMUSG00000024913.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGGGGCTGCTTGGCCCC	NA	False	NA	NA	False	NA	NA	NA	3681391	3686205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3683736_3686070
ES.17061.1	chr19	+	324	1	Intergenic	novelGene_14225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATGTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	3701001	3701325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3701000_3701300
ES.17062.1	chr19	+	161	1	Intergenic	novelGene_14226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	3727175	3727336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3727200_3727300
ES.17062.2	chr19	+	180	2	Antisense	novelGene_ENSMUSG00000024913.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	3727176	3728812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3727185_3728640
ES.17062.3	chr19	+	183	1	Intergenic	novelGene_14227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	3728629	3728812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3728600_3728800
ES.17063.1	chr19	-	5308	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-141	-6	-133	6	multi-exon	TRUE	canonical	2	72	junction_10	15.3130555220533	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGTGCCTCGTGAA	7686	False	NA	6	True	TATAAA	-26	NA	3736697	3634821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.11	chr19	-	6948	23	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.6039541411415	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACCTGCCATTCCT	7820	False	NA	-8	True	TATAAA	-12	NA	3736563	3634835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660034_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3672089_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.12	chr19	-	5164	23	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	24.9730433179856	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACCTGCCATTCCT	7791	False	NA	-8	True	TATAAA	-12	NA	3736592	3634835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660214_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.13	chr19	-	5270	24	NIC	ENSMUSG00000024913.17	novel	8893	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	31.1137312486259	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACCTGCCATTCCT	7823	False	NA	-8	True	TATAAA	-12	NA	3736560	3634835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3701842_3701956_3702132_3702331_3709243_3709641_3736354
ES.17063.16	chr19	-	5263	24	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.76181444503	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACCTGCCATTCCT	7842	False	NA	-8	True	TATAAA	-12	NA	3736541	3634835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660034_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3699882_3700004_3702132_3702331_3709243_3709641_3736354
ES.17063.18	chr19	-	5179	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-114	96	-106	-88	multi-exon	FALSE	canonical	2	72	junction_10	15.3130555220533	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTGAGAAATGTGAGC	7713	False	NA	-96	True	AATAAA	-17	NA	3736670	3634923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.19	chr19	-	4865	23	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	33	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.0900856254859	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTGAGAAATGTGAGC	7860	False	NA	-96	True	AATAAA	-17	NA	3736523	3634923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662461_3664331_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.22	chr19	-	199	1	Intergenic	novelGene_14224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGCTGGGTGTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	3638785	3638586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3638600_3638800
ES.17063.23	chr19	-	4186	18	ISM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	-7	12348	1	-12340	5prime_fragment	FALSE	canonical	2	72	junction_5	13.939066606293	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAAACACGGGGCTCCA	7820	False	NA	NA	False	ATTAAA	-23	NA	3736563	3647175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.24	chr19	-	3549	13	ISM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	34372	18418	34372	-18410	internal_fragment	FALSE	canonical	2	72	junction_2	12.6556970043798	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTGCTGGAGAGATGG	NA	False	NA	NA	False	AATAAA	-10	NA	3702184	3653245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132
ES.17063.25	chr19	-	3756	15	ISM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	1	18955	1	17888	5prime_fragment	FALSE	canonical	2	72	junction_2	13.3296125760868	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTAGTGCCTTTTCTTC	7828	False	NA	NA	False	NA	NA	NA	3736555	3653782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.26	chr19	-	5716	14	NNC	ENSMUSG00000024913.17	novel	8893	23	NA	NA	0	17888	intron_retention	FALSE	canonical	0	0	junction_3	27.5835471070332	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTAGTGCCTTTTCTTC	7822	False	NA	NA	False	NA	NA	NA	3736561	3653782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3654193_3655285_3655495_3660038_3662517_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.3	chr19	-	5199	23	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.3045907702454	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCATTCCTTTGTGC	7837	False	NA	-2	True	TATAAA	-18	NA	3736546	3634829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660289_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.4	chr19	-	5099	23	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	24.5947736838944	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCATTCCTTTGTGC	7842	False	NA	-2	True	TATAAA	-18	NA	3736541	3634829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647288_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17063.5	chr19	-	5331	25	NNC	ENSMUSG00000024913.17	novel	8893	23	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	35.1096496707102	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCATTCCTTTGTGC	7889	False	NA	-2	True	TATAAA	-18	NA	3736494	3634829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3699882_3700004_3701842_3701956_3702132_3702331_3709243_3709641_3736354
ES.17063.6	chr19	-	5208	24	NNC	ENSMUSG00000024913.17	novel	5161	23	NA	NA	56	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	30.9327583437424	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCATTCCTTTGTG	7883	False	NA	-3	True	TATAAA	-17	NA	3736500	3634830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3656796_3656903_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ES.17064.1	chr19	+	217	1	Intergenic	novelGene_14229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	AATGAA	-19	NA	3756098	3756315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3756100_3756300
ES.17065.1	chr19	-	503	3	NNC	ENSMUSG00000118249.2	novel	571	3	NA	NA	1118	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGCCTTGGTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	3757058	3739668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3740001_3756645_3756786_3757027
ES.17065.2	chr19	-	191	1	Intergenic	novelGene_14228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTTAATTTTTAAAAAAT	8897	False	NA	NA	False	NA	NA	NA	3747330	3747139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3747100_3747300
ES.17065.3	chr19	-	2028	1	NIC	ENSMUSG00000118249.2	novel	571	3	NA	NA	360	-16103	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGTGTAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	3757816	3755788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3755800_3757800
ES.17066.1	chr19	+	1700	3	FSM	ENSMUSG00000035372.3	ENSMUST00000235295.2	1643	3	-54	-3	0	0	multi-exon	FALSE	canonical	2	4	junction_1	146.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	False	NA	11	True	ATTAAA	-23	NA	3758292	3767881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3758437_3765637_3765803_3766490
ES.17066.10	chr19	+	7187	5	NNC	ENSMUSG00000035372.3	novel	1875	4	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	149.253768796637	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758347	3767880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3761972_3762576_3763587_3763627_3764626_3765637_3765803_3766490
ES.17066.11	chr19	+	3224	3	NIC	ENSMUSG00000035372.3	novel	2193	4	NA	NA	3	-2	intron_retention	FALSE	canonical	3	38	junction_1	129.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTCCAGCTTGTGTG	NA	False	NA	1	True	ATTAAA	-13	NA	3758349	3767871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3758437_3764046_3765803_3766490
ES.17066.12	chr19	+	2268	4	NIC	ENSMUSG00000035372.3	novel	2193	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	140.719579305795	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTGTGTGGGTCTGT	NA	False	NA	8	True	ATTAAA	-20	NA	3758372	3767878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3758509_3764046_3764626_3765637_3765803_3766490
ES.17066.13	chr19	+	4284	2	ISM	ENSMUSG00000035372.3	ENSMUST00000235295.2	1643	3	4562	-2	4496	0	3prime_fragment	FALSE	canonical	3	297	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3762908	3767880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3765803_3766490
ES.17066.2	chr19	+	1916	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	-34	0	6	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	False	NA	11	True	ATTAAA	-23	NA	3758298	3767881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ES.17066.4	chr19	+	2925	3	NIC	ENSMUSG00000035372.3	novel	1882	4	NA	NA	7	1	intron_retention	FALSE	canonical	3	184	junction_1	56.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTTGTGTGGGTCTGTG	NA	False	NA	9	True	ATTAAA	-21	NA	3758299	3767879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3758437_3764403_3765803_3766490
ES.17066.5	chr19	+	2270	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237955.2	2193	4	-70	-7	8	0	multi-exon	FALSE	canonical	3	38	junction_1	122.806984962402	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758300	3767880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3758437_3764046_3764626_3765637_3765803_3766490
ES.17066.6	chr19	+	5028	7	NNC	ENSMUSG00000035372.3	novel	1882	4	NA	NA	9	9053	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.490057035768	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGGGCATGCAT	NA	False	NA	NA	False	NA	NA	NA	3758301	3776934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490_3769950_3770138_3770340_3770844_3770958_3776201
ES.17066.7	chr19	+	1973	5	NNC	ENSMUSG00000035372.3	novel	2193	4	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.398317297609	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTTGTGTGGGTCTGTG	NA	False	NA	9	True	ATTAAA	-21	NA	3758305	3767879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3758437_3764046_3764116_3764406_3764626_3765637_3765803_3766490
ES.17066.8	chr19	+	1964	4	FSM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	-89	0	-11	0	multi-exon	FALSE	canonical	2	2	junction_1	139.776806214606	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758321	3767880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3758509_3764403_3764626_3765637_3765803_3766490
ES.17066.9	chr19	+	1725	3	NIC	ENSMUSG00000035372.3	novel	1875	4	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	148.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758338	3767880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3758509_3765637_3765803_3766490
ES.17067.1	chr19	-	165	1	Intergenic	novelGene_14230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3779242	3779077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3779100_3779200
ES.17068.1	chr19	-	182	1	Intergenic	novelGene_14231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGTCTACA	NA	False	NA	NA	False	NA	NA	NA	3787300	3787118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3787100_3787300
ES.17069.1	chr19	+	175	1	Intergenic	novelGene_14232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	7981	False	NA	NA	False	NA	NA	NA	3795351	3795526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3795400_3795500
ES.1707.1	chr1	-	3831	10	NNC	ENSMUSG00000004031.14	novel	4167	8	NA	NA	-10	-77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGTGATTGTTT	NA	False	NA	NA	False	NA	NA	NA	158183875	158072915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_158074885_158076858_158077082_158078809_158079047_158082543_158082650_158084609_158084695_158094031_158094241_158095399_158095591_158122995_158123341_158183086_158183243_158183565
ES.17070.1	chr19	+	182	1	Intergenic	novelGene_14233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGTGTGGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	3804725	3804907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3804700_3804900
ES.17071.1	chr19	+	2933	2	Intergenic	novelGene_14234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCGTCTGTTCG	NA	False	NA	NA	False	NA	NA	NA	3806044	3810270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3806209_3807501
ES.17072.1	chr19	+	6093	10	NNC	ENSMUSG00000045098.20	novel	6002	11	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	127.606842186614	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3817325	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.10	chr19	+	7161	6	ISM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	-183	0	-183	0	intron_retention	FALSE	canonical	3	249	junction_4	23.5592869162036	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3817849	3858835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787
ES.17072.11	chr19	+	1905	10	NNC	ENSMUSG00000045098.20	novel	3216	14	NA	NA	-160	-182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	129.83731511034	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAACACAGTGAGG	NA	False	NA	NA	False	AATAAA	-21	NA	3817872	3855281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.12	chr19	+	3189	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-160	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	112.133848591761	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817872	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.13	chr19	+	3288	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-160	0	intron_retention	FALSE	non_canonical	0	0	junction_9	123.270596656299	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3817872	3858835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.14	chr19	+	3908	10	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	-159	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	100.208055170169	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3817873	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.15	chr19	+	1930	8	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-159	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.3606089566932	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAGAATTGACCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	3817873	3855464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.16	chr19	+	5964	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.367386487132	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCAGTGTTCACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	3817873	3868302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.17	chr19	+	2855	9	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-159	16	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	90.2811580563741	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGGTGGTGTACTCC	NA	False	NA	16	True	NA	NA	NA	3817873	3856340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916
ES.17072.18	chr19	+	3122	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	-153	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	94.9986842014141	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817879	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.19	chr19	+	5873	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-145	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	118.346008710804	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGATCTGGTCAGTG	NA	False	NA	NA	False	AATAAA	-9	NA	3817887	3868294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.2	chr19	+	3398	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-48	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	119.573241153696	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817372	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.20	chr19	+	4223	9	NIC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	-139	-89	intron_retention	FALSE	canonical	3	88	junction_8	69.2080197664982	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGATTGGTGCTTATTT	NA	False	NA	NA	False	GATAAA	-14	NA	3817893	3866302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3855054_3857224_3857422_3864114
ES.17072.21	chr19	+	7032	7	NIC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-139	-2	intron_retention	FALSE	canonical	3	249	junction_4	22.4629324295234	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817893	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3854834_3854916
ES.17072.22	chr19	+	2845	9	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-139	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.906935773318	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGGTGGTGTACTC	NA	False	NA	15	True	NA	NA	NA	3817893	3856339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.23	chr19	+	6039	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-139	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	119.568438855109	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3817893	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.24	chr19	+	5813	9	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	-139	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.730234535221	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3817893	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.25	chr19	+	4265	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-137	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	100.208055170169	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAGTGTAAGCACTG	NA	False	NA	NA	False	AATAAA	-13	NA	3817895	3866685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.26	chr19	+	5968	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-134	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	122.261032222045	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3817898	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.27	chr19	+	5370	10	NNC	ENSMUSG00000045098.20	novel	4150	12	NA	NA	-134	-85	intron_retention	FALSE	non_canonical	0	0	junction_7	122.98690083817	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3817898	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3833776_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.28	chr19	+	3423	8	NIC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	-117	2	intron_retention	FALSE	canonical	3	179	junction_7	40.024992192379	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGTTTTCTTGAGT	NA	False	NA	52	True	AATAAA	-11	NA	3817915	3858831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3855054_3857224
ES.17072.29	chr19	+	3666	9	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	-116	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	119.773157990428	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGGTGCTTATTTTT	NA	False	NA	NA	False	GATAAA	-16	NA	3817916	3866304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3864114
ES.17072.3	chr19	+	7661	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-40	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	120.814180110211	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTCAGTGTTCACTG	NA	False	NA	NA	False	AATAAA	-16	NA	3817380	3868301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3832219_3833776_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.31	chr19	+	4241	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-103	72	intron_retention	FALSE	canonical	3	5	junction_3	137.718266717434	417	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTATAATAGTTTATGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	3817929	3866463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3833593_3833776_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854834_3854916_3855054_3864114
ES.17072.32	chr19	+	3853	9	NIC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	-92	-91	intron_retention	FALSE	canonical	3	16	junction_3	102.346149781025	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATGATTGGTGCTTAT	NA	False	NA	NA	False	GATAAA	-12	NA	3817940	3866300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3855054_3857224_3857422_3864114
ES.17072.33	chr19	+	2845	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	-50	-2	intron_retention	FALSE	canonical	0	0	junction_1	118.673922999116	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3817982	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836563_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854579_3854916_3855054_3857224
ES.17072.34	chr19	+	4186	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-44	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.367386487132	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTAAGTTTAGAAATA	NA	False	NA	NA	False	ATTAAA	-16	NA	3817988	3866639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.36	chr19	+	3812	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-1	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.367386487132	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGCTTATTTTTTCAA	NA	False	NA	NA	False	GATAAA	-20	NA	3818031	3866308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.37	chr19	+	3426	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-19	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	124.552960623182	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818098	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832646_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.38	chr19	+	5683	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.87610830002	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3818112	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818357_3836384_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.39	chr19	+	5469	9	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	119.773157990428	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818112	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3864114
ES.17072.4	chr19	+	3297	10	NNC	ENSMUSG00000045098.20	novel	3290	11	NA	NA	0	5	intron_retention	FALSE	non_canonical	0	0	junction_8	114.50451497918	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGAGTCTGGTTCCT	NA	False	NA	61	True	AATAAA	-20	NA	3817420	3858840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.40	chr19	+	5675	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.799676897801	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3818118	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3819379_3819398_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.41	chr19	+	2803	10	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	2	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	130.759320891476	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGGTGTACTCCT	NA	False	NA	17	True	NA	NA	NA	3818119	3856341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3833593_3833776_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.42	chr19	+	2246	6	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	5	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	137.716520432372	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAATGTGGTGGTGTAC	NA	False	NA	13	True	NA	NA	NA	3818122	3856337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.43	chr19	+	1297	8	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-6	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.3606089566932	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCATGATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	3818127	3855085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.44	chr19	+	2290	7	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-2	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	125.674181914982	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCCAAATGTGGTGGT	NA	False	NA	9	True	NA	NA	NA	3818143	3856333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.45	chr19	+	5512	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.321271211923	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCAGTGTTCACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	3818147	3868302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.46	chr19	+	4853	7	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	105.667192427714	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818152	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854900
ES.17072.47	chr19	+	1902	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	6	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	121.886153335808	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAAATGTGGTGGTGT	NA	False	NA	11	True	NA	NA	NA	3818154	3856335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3855671
ES.17072.48	chr19	+	3385	9	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	6	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	113.15524457576	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATTGGTGCTTATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	3818154	3866303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.49	chr19	+	3783	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	7	72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	100.208055170169	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTATAATAGTTTATGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	3818155	3866463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.5	chr19	+	2091	9	NNC	ENSMUSG00000045098.20	novel	3216	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	121.034537942688	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAGAATTGACCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	3817421	3855464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.51	chr19	+	3557	9	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	7	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.730234535221	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3818155	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.53	chr19	+	3217	8	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	8	-129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	124.776044273289	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACTTTCCAATCCTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	3818156	3866262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854900_3855054_3864114
ES.17072.54	chr19	+	3665	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-7	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	132.164897003705	415	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATTGGTGCTTATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	3818158	3866303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3833593_3833776_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3864114
ES.17072.55	chr19	+	5055	10	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	128.021795983784	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3818158	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114_3865519_3866011
ES.17072.56	chr19	+	5380	9	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	113.15524457576	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818159	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.57	chr19	+	2731	9	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_1	118.673922999116	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3818159	3858835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818228_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.58	chr19	+	5660	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	94.8938881066637	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818160	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.59	chr19	+	1404	7	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	125.674181914982	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAGAATTGACCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	3818160	3855464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.6	chr19	+	5892	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	126	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	116.293800066402	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3817648	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3817731_3818021_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.60	chr19	+	4224	8	NIC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	-5	-49	intron_retention	FALSE	canonical	3	16	junction_3	107.502634044616	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTAAGTTTAGAAATA	NA	False	NA	NA	False	ATTAAA	-16	NA	3818160	3866639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3855054_3857224_3857422_3864114
ES.17072.61	chr19	+	3082	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	124.1539769802	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818161	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3833593_3833776_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.62	chr19	+	1731	9	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-3	42	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	90.2811580563741	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATGCTTGATGAAAAC	NA	False	NA	46	True	ATTAAA	-12	NA	3818162	3855505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916
ES.17072.63	chr19	+	3424	10	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	-1	-88	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	111.244475518263	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATTGGTGCTTATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	3818164	3866303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.64	chr19	+	5321	9	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	116.335116688814	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818165	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854447_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.65	chr19	+	5365	9	NIC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	1	-85	intron_retention	FALSE	canonical	3	88	junction_8	70.3398002556163	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3818169	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.66	chr19	+	3658	11	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	1	-88	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	94.8938881066637	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATTGGTGCTTATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	3818169	3866303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.67	chr19	+	3763	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	2	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	119.568438855109	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGATTGGTGCTTATT	NA	False	NA	NA	False	GATAAA	-13	NA	3818170	3866301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.68	chr19	+	5285	8	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	119.02700773954	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAAATTAAAATGATCTGG	NA	False	NA	NA	False	AATAAA	-3	NA	3818170	3868288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.69	chr19	+	5364	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	118.736038815434	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCAGTGTTCACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	3818170	3868302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854447_3854562_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.7	chr19	+	5399	8	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	253	0	intron_retention	FALSE	non_canonical	0	0	junction_7	99.3606089566932	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3817775	3858835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.70	chr19	+	5438	9	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	103.374848851159	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3818170	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854900_3855054_3857224_3857422_3864114
ES.17072.71	chr19	+	3205	8	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	2	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	112.326056002794	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3818170	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854900_3855054_3857224_3857422_3864114
ES.17072.73	chr19	+	5743	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.727957281739	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818174	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832755_3832853_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.75	chr19	+	3762	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	6	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	113.91419772989	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTAAGTTTAGAAATA	NA	False	NA	NA	False	ATTAAA	-16	NA	3818174	3866639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832281_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.76	chr19	+	6111	8	NIC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	9	-88	intron_retention	FALSE	canonical	3	88	junction_7	69.4694177318336	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATTGGTGCTTATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	3818177	3866303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3857422_3864114
ES.17072.77	chr19	+	5100	11	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	114.73190489136	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818178	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114_3865519_3866011
ES.17072.78	chr19	+	3076	11	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	10	-119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	114.73190489136	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCCTTTTAGATAAAATT	NA	False	NA	NA	False	ATTAAA	-22	NA	3818178	3866272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114_3865519_3866011
ES.17072.79	chr19	+	3209	9	NNC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	16	-86	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	128.434747537417	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGGTGCTTATTTTTT	NA	False	NA	NA	False	GATAAA	-17	NA	3818184	3866305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854768_3854834_3854916_3855054_3864114
ES.17072.8	chr19	+	2889	8	NNC	ENSMUSG00000045098.20	novel	1721	10	NA	NA	-238	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	99.3606089566932	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTGTACTCCTTTA	NA	False	NA	20	True	NA	NA	NA	3817794	3856344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.80	chr19	+	3668	10	NIC	ENSMUSG00000045098.20	novel	4159	12	NA	NA	-17	-85	intron_retention	FALSE	canonical	3	88	junction_9	65.6490858210212	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGCTTATTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	3818200	3866306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3855054_3857224_3857422_3864114
ES.17072.81	chr19	+	5565	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.87610830002	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCTGGTCAGTGTTCAC	NA	False	NA	NA	False	AATAAA	-14	NA	3818203	3868299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818335_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.82	chr19	+	3125	12	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	127.187763848286	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818215	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3832219_3832280_3832755_3832853_3833593_3833776_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.83	chr19	+	2327	6	NNC	ENSMUSG00000045098.20	novel	2975	10	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	130.527238536636	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818218	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.84	chr19	+	2721	9	NNC	ENSMUSG00000045098.20	novel	624	5	NA	NA	143	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	128.027340829996	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAAATGTGGTGGTGT	NA	False	NA	11	True	NA	NA	NA	3818375	3856335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818703_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.85	chr19	+	2570	9	NNC	ENSMUSG00000045098.20	novel	772	6	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	127.853370604767	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTCAGAGCCAAA	NA	False	NA	0	True	NA	NA	NA	3818499	3856324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818687_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900
ES.17072.86	chr19	+	2847	9	NNC	ENSMUSG00000045098.20	novel	772	6	NA	NA	-46	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	118.263212792483	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTTTTCTTGAGTCT	NA	False	NA	54	True	AATAAA	-13	NA	3818500	3858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818687_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.87	chr19	+	5649	11	NNC	ENSMUSG00000045098.20	novel	624	5	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	117.751475574619	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818544	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818703_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.88	chr19	+	5589	10	NNC	ENSMUSG00000045098.20	novel	772	6	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	116.70189944184	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3818544	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818703_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.89	chr19	+	2746	8	NNC	ENSMUSG00000045098.20	novel	723	6	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	134.561570764207	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACTTTGTTTTCTTGA	NA	False	NA	50	True	AATAAA	-9	NA	3818544	3858829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818703_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224
ES.17072.9	chr19	+	5957	10	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-211	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	100.208055170169	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3817821	3868303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.90	chr19	+	6032	9	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	-5932	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	103.099466535962	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	3835787	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.91	chr19	+	4918	8	NNC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	1414	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	102.781122700978	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTTTTCAAATTACTG	NA	False	NA	NA	False	AATATA	-20	NA	3843133	3868088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854900_3855054_3857224_3857422_3864114
ES.17072.92	chr19	+	5426	4	NIC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	-470	-6	intron_retention	FALSE	canonical	3	88	junction_3	84.7125859729369	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	1947	False	NA	NA	False	AATAAA	-11	NA	3853923	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3854834_3854916_3855054_3857224_3857422_3864114
ES.17072.93	chr19	+	4679	4	NNC	ENSMUSG00000045098.20	novel	3933	10	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0798649880161	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGGTCAGTGTT	2449	False	NA	NA	False	AATAAA	-11	NA	3854425	3868296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3854562_3854889_3855054_3857224_3857422_3864114
ES.17072.94	chr19	+	4646	1	Genic_Genomic	ENSMUSG00000045098.20	novel	NA	NA	NA	NA	3828	-3524	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGCTAGATCCTTGCTT	6245	False	NA	NA	False	NA	NA	NA	3858221	3862867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_3858200_3862900
ES.17072.95	chr19	+	2357	1	Genic_Genomic	ENSMUSG00000045098.20	novel	NA	NA	NA	NA	4429	2344	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGGGCAATCTTTTCTG	6846	False	NA	NA	False	AATAAA	-22	NA	3858822	3861179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_3858800_3861200
ES.17072.96	chr19	+	5817	1	NIC	ENSMUSG00000045098.20	novel	6130	13	NA	NA	8090	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGTCAGTGTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	3862483	3868300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3862500_3868300
ES.17073.1	chr19	+	204	1	Intergenic	novelGene_14242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGGTTATGCCTATGCA	NA	False	NA	NA	False	NA	NA	NA	3879018	3879222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3879000_3879200
ES.17074.1	chr19	+	160	2	Antisense	novelGene_ENSMUSG00000082848.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	3882362	3882690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_3882372_3882539
ES.17074.2	chr19	+	181	1	Intergenic	novelGene_14243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3882528	3882709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3882500_3882700
ES.17075.1	chr19	+	150	1	Intergenic	novelGene_14244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	3889327	3889477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_3889300_3889500
ES.17076.1	chr19	+	2599	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	-50	0	-26	0	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5694	False	NA	6	True	AATAAA	-17	NA	3901746	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.10	chr19	+	2725	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	85.421475065506	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTTACCCTTCATATG	5715	False	NA	9	True	AATAAA	-20	NA	3901767	3944372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3924768_3924799_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.11	chr19	+	1833	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-302	788	1	-81	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTTTACACTCTCAC	5721	False	NA	7	True	ATTAAA	-20	NA	3901773	3943576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.12	chr19	+	2838	15	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	92.2701225218872	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5721	False	NA	5	True	AATAAA	-16	NA	3901773	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3924768_3924799_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.13	chr19	+	7192	14	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	86.7967086879062	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGTTACCCTTCATA	5748	False	NA	7	True	AATAAA	-18	NA	3901800	3944370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3902414_3914647_3914760_3921002_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.14	chr19	+	5796	8	NIC	ENSMUSG00000024843.16	novel	2549	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	55	junction_2	59.2445640320438	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5752	False	NA	6	True	AATAAA	-17	NA	3901804	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3936467_3937388_3937448_3939022_3942214_3942709_3942792_3943347
ES.17076.15	chr19	+	2749	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	83.9052015088259	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGTTCTCAGACTGTT	5754	False	NA	-3	True	AATAAA	-8	NA	3901806	3944360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925366_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.16	chr19	+	1738	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	12	799	-1	-87	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCATCTTTGTTTACAC	5756	False	NA	1	True	ATTAAA	-14	NA	3901808	3943570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.17	chr19	+	7323	12	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	10	junction_2	64.7060741589061	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5756	False	NA	6	True	AATAAA	-17	NA	3901808	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3902414_3914647_3914760_3921002_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.18	chr19	+	2647	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	39	-3	2	1	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5759	False	NA	5	True	AATAAA	-16	NA	3901811	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.2	chr19	+	1104	1	Genic_Genomic	ENSMUSG00000024843.16	novel	NA	NA	NA	NA	-20	-14814	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAGAAAAA	5700	False	NA	NA	False	NA	NA	NA	3901752	3902856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_3901800_3902900
ES.17076.21	chr19	+	2721	13	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.1017228597502	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGTTACCCTTCATA	5779	False	NA	7	True	AATAAA	-18	NA	3901831	3944370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3925734_3925789_3931968_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.22	chr19	+	1258	1	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	2	-14579	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAAGAGGGAGG	5781	False	NA	NA	False	NA	NA	NA	3901833	3903091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3901800_3903100
ES.17076.23	chr19	+	6589	15	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	90.7922331030399	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5781	False	NA	5	True	AATAAA	-16	NA	3901833	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3924799_3925366_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.24	chr19	+	3773	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	2	1	intron_retention	FALSE	canonical	2	2	junction_3	91.0092003932186	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	5781	False	NA	3	True	AATAAA	-14	NA	3901833	3944366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925366_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.25	chr19	+	2738	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.8704387427909	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	5781	False	NA	3	True	AATAAA	-14	NA	3901833	3944366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3940274_3940390_3942106_3942214_3942709_3942792_3943347
ES.17076.27	chr19	+	3115	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	370	120	101	-120	multi-exon	FALSE	canonical	3	158	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAGAAAAGAAAA	6149	False	NA	NA	False	NA	NA	NA	3902201	3917550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647
ES.17076.28	chr19	+	2147	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-9920	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	94.8435023648347	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	1693	False	NA	5	True	AATAAA	-16	NA	3914743	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3914760_3924768_3924799_3925366_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.29	chr19	+	7683	12	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-9307	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	80.6764786965571	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	2306	False	NA	4	True	AATAAA	-15	NA	3915356	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3921063_3925366_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.3	chr19	+	2767	13	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	73.4296715685605	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5701	False	NA	4	True	AATAAA	-15	NA	3901753	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3902414_3914647_3914760_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.30	chr19	+	5090	13	NNC	ENSMUSG00000024843.16	novel	744	8	NA	NA	-7008	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.1065341692821	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	4605	False	NA	5	True	AATAAA	-16	NA	3917655	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3917763_3917982_3921063_3924768_3924799_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.31	chr19	+	6990	14	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-5905	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.9999681873077	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5708	False	NA	4	True	AATAAA	-15	NA	3918758	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3923621_3924482_3924604_3924768_3924799_3925366_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.32	chr19	+	9015	10	NNC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-5598	0	intron_retention	FALSE	canonical	2	9	junction_7	93.5245395934823	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	6015	False	NA	4	True	AATAAA	-15	NA	3919065	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925789_3931997_3932121_3934471_3934586_3935859_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942123_3942214_3942709_3942792_3943347
ES.17076.33	chr19	+	8385	10	ISM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	17148	-5	-5440	0	3prime_fragment	FALSE	canonical	3	87	junction_1	43.04892422051	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	6173	False	NA	6	True	AATAAA	-17	NA	3919223	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.34	chr19	+	7311	11	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-4629	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	67.2533270552469	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	6984	False	NA	6	True	AATAAA	-17	NA	3920034	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.35	chr19	+	6802	11	NIC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-3735	1	intron_retention	FALSE	canonical	3	16	junction_1	75.6357058537831	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	7878	False	NA	5	True	AATAAA	-16	NA	3920928	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.36	chr19	+	6846	9	NIC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-3535	0	intron_retention	FALSE	canonical	3	87	junction_1	44.9687391417638	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	8078	False	NA	4	True	AATAAA	-15	NA	3921128	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3925789_3934471_3934586_3935859_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.37	chr19	+	5728	11	NIC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-3453	-81	intron_retention	FALSE	canonical	3	16	junction_1	75.6357058537831	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTTTACACTCTCAC	8160	False	NA	7	True	ATTAAA	-20	NA	3921210	3943576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.38	chr19	+	6268	10	NNC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-3343	1	intron_retention	FALSE	canonical	2	9	junction_7	71.6162613439775	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	8270	False	NA	3	True	AATAAA	-14	NA	3921320	3944366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942123_3942214_3942709_3942792_3943347
ES.17076.39	chr19	+	4865	12	NNC	ENSMUSG00000024843.16	novel	744	8	NA	NA	-2754	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	80.1560461570878	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGACTGTTACCCTT	8859	False	NA	3	True	AATAAA	-14	NA	3921909	3944366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3924799_3925366_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.4	chr19	+	2823	14	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	87.0287308881383	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	5703	False	NA	2	True	AATAAA	-13	NA	3901755	3944365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.40	chr19	+	3181	10	ISM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	21559	788	-1029	-81	3prime_fragment	FALSE	canonical	3	87	junction_1	43.04892422051	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTTTACACTCTCAC	NA	False	NA	7	True	ATTAAA	-20	NA	3923634	3943576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.41	chr19	+	3341	11	NNC	ENSMUSG00000024843.16	novel	744	8	NA	NA	-680	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	83.0712946811352	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	NA	False	NA	2	True	AATAAA	-13	NA	3923983	3944365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925472_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942123_3942214_3942709_3942792_3943347
ES.17076.42	chr19	+	2471	12	NIC	ENSMUSG00000024843.16	novel	744	8	NA	NA	-463	-85	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	84.741415128711	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTTTGTTTACACTC	NA	False	NA	3	True	ATTAAA	-16	NA	3924200	3943572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.43	chr19	+	3430	11	NNC	ENSMUSG00000024843.16	novel	2319	12	NA	NA	-313	1	intron_retention	FALSE	canonical	1	1	junction_2	80.8448514130615	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	NA	False	NA	5	True	AATAAA	-16	NA	3924350	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925789_3931997_3932171_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.44	chr19	+	2884	12	NNC	ENSMUSG00000024843.16	novel	744	8	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	93.6213580209449	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	NA	False	NA	2	True	AATAAA	-13	NA	3924563	3944365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942123_3942214_3942709_3942792_3943347
ES.17076.45	chr19	+	2013	11	NNC	ENSMUSG00000024843.16	novel	875	3	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	69.6606775735063	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	NA	False	NA	4	True	AATAAA	-15	NA	3925200	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3925342_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.46	chr19	+	5587	1	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	6709	250	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAACCCTAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	3932113	3937700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3932100_3937700
ES.17076.47	chr19	+	7939	4	NIC	ENSMUSG00000024843.16	novel	4652	10	NA	NA	-7122	1	intron_retention	FALSE	canonical	3	193	junction_1	17.9876500843094	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	1130	False	NA	5	True	AATAAA	-16	NA	3934608	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3939111_3939879_3942214_3942709_3942792_3943347
ES.17076.48	chr19	+	4252	5	ISM	ENSMUSG00000024843.16	ENSMUST00000125859.8	4652	10	34910	0	-5011	0	3prime_fragment	FALSE	canonical	3	193	junction_2	15.6584641647896	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	32	False	NA	4	True	AATAAA	-15	NA	3936719	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_3937448_3939022_3939111_3939879_3942214_3942709_3942792_3943347
ES.17076.49	chr19	+	6716	1	NIC	ENSMUSG00000024843.16	novel	2549	11	NA	NA	-4078	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	584	False	NA	5	True	AATAAA	-16	NA	3937652	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3937700_3944400
ES.17076.5	chr19	+	2637	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	-313	-5	-10	0	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5710	False	NA	6	True	AATAAA	-17	NA	3901762	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.6	chr19	+	2665	13	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	79.1648684006289	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	5711	False	NA	5	True	AATAAA	-16	NA	3901763	3944368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3924768_3924799_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.7	chr19	+	2921	15	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	91.0955990334621	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGACTGTTACCCTTC	5712	False	NA	4	True	AATAAA	-15	NA	3901764	3944367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925366_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17076.8	chr19	+	3687	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	-67	-15	-8	15	multi-exon	FALSE	canonical	3	158	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAGAAAGAAAAG	5712	False	NA	NA	False	NA	NA	NA	3901764	3917685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3902414_3914647
ES.17076.9	chr19	+	2956	16	NNC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.9588122064008	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5713	False	NA	6	True	AATAAA	-17	NA	3901765	3944369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3902418_3914647_3914760_3921002_3921063_3924768_3924799_3925366_3925472_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ES.17077.1	chr19	-	175	2	NNC	ENSMUSG00000117773.2	novel	692	2	NA	NA	-28863	-2074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGTAAAATT	NA	False	NA	NA	False	NA	NA	NA	3821400	3792298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3792422_3821348
ES.17077.2	chr19	-	150	1	ISM	ENSMUSG00000117773.2	ENSMUST00000235154.2	692	2	71	2092	71	-2092	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	3792466	3792316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_3792300_3792500
ES.17077.3	chr19	-	180	1	Intergenic	novelGene_14235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3812070	3811890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3811900_3812100
ES.17077.4	chr19	-	176	2	Antisense	novelGene_ENSMUSG00000045098.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	588	junction_1	0	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3821400	3811890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_3812018_3821351
ES.17077.5	chr19	-	4921	1	Antisense	novelGene_ENSMUSG00000045098.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATTTCTGAGGAATG	NA	False	NA	NA	False	NA	NA	NA	3818455	3813534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_3813500_3818500
ES.17077.6	chr19	-	251	1	Intergenic	novelGene_14236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTCTACTAATTACCC	NA	False	NA	NA	False	AAAAAG	-40	NA	3819666	3819415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3819400_3819700
ES.17077.7	chr19	-	180	1	Intergenic	novelGene_14237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTGACAA	NA	False	NA	NA	False	NA	NA	NA	3821403	3821223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3821200_3821400
ES.17078.1	chr19	-	169	1	Intergenic	novelGene_14238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3823068	3822899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3822900_3823100
ES.17079.1	chr19	-	190	1	Intergenic	novelGene_14239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGCTTTATAACAAGA	NA	False	NA	NA	False	NA	NA	NA	3826195	3826005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3826000_3826200
ES.1708.1	chr1	-	180	1	Antisense	novelGene_ENSMUSG00000103762.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTATTAAAAAAAAGATACA	NA	False	NA	NA	False	NA	NA	NA	158204958	158204778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_158204800_158205000
ES.17080.1	chr19	-	208	1	Intergenic	novelGene_14240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	3827925	3827717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3827700_3827900
ES.17081.1	chr19	-	1353	5	NNC	ENSMUSG00000082848.2	novel	1086	3	NA	NA	12	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTCACTTAAAATGTAT	9416	False	NA	NA	False	AATAAA	-21	NA	3902407	3848597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3849542_3853030_3853179_3853465_3853545_3854857_3854972_3902339
ES.17081.2	chr19	-	1544	2	Intergenic	novelGene_14241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCCCACTACATATCAG	NA	False	NA	NA	False	GATAAA	-45	NA	3858044	3854329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3855052_3857222
ES.17082.1	chr19	-	270	1	Intergenic	novelGene_14245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGATACTTCTACCT	9930	False	NA	NA	False	NA	NA	NA	3904771	3904501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_3904500_3904800
ES.17083.1	chr19	-	4880	1	Genic_Genomic	ENSMUSG00000117912.2	novel	NA	NA	NA	NA	2089	2863	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCAAAAGTCTCAAATC	3110	False	NA	NA	False	NA	NA	NA	3915584	3910704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_3910700_3915600
ES.17084.1	chr19	-	2848	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-13	0	intron_retention	FALSE	canonical	3	39	junction_11	8.69832740554063	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957053	3946049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.10	chr19	-	3063	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-24	-2	intron_retention	FALSE	canonical	0	0	junction_16	15.9887503704419	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957064	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954613_3954706_3957018
ES.17084.11	chr19	-	2687	19	NNC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-20	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	19.6992824335066	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957060	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947012_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948758_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.12	chr19	-	2685	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	39	junction_12	8.62740394124629	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTTTGTCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-15	NA	3957054	3946054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.13	chr19	-	2721	7	NNC	ENSMUSG00000001750.17	novel	2424	19	NA	NA	26	1306	intron_retention	FALSE	non_canonical	0	0	junction_5	26.5293338694275	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAGGTTCAGTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	3957086	3950936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954613_3954713_3957018
ES.17084.14	chr19	-	4472	1	NIC	ENSMUSG00000001750.17	novel	3041	20	NA	NA	-182	1302	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTCAAGGTTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	3955412	3950940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3950900_3955400
ES.17084.15	chr19	-	2440	9	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-15	1275	intron_retention	FALSE	canonical	3	39	junction_1	7.92839044194974	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3957055	3950967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.2	chr19	-	3159	17	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-13	0	intron_retention	FALSE	canonical	3	39	junction_10	8.88028011945569	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957053	3946049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.3	chr19	-	2973	18	NNC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_5	15.8487662296931	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957055	3946050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947578_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.4	chr19	-	2684	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	3	1	3	-1	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTCTGTCCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	3957130	3946050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.5	chr19	-	3126	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	14	-2	intron_retention	FALSE	canonical	3	39	junction_11	8.75502821418308	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957098	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.6	chr19	-	2812	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	20	-2	intron_retention	FALSE	canonical	3	39	junction_12	8.62740394124629	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957092	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.7	chr19	-	3460	15	NNC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	20	-2	intron_retention	FALSE	canonical	0	0	junction_6	17.611597523988	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957092	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947759_3947877_3948547_3948639_3948717_3949120_3951890_3952557_3952630_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17084.8	chr19	-	3075	20	FSM	ENSMUSG00000001750.17	ENSMUST00000126070.9	3041	20	-36	2	13	-2	multi-exon	FALSE	canonical	0	0	junction_19	15.1306407031772	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957027	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3956523
ES.17084.9	chr19	-	2914	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	39	junction_11	8.71496513383448	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTCTCTGTCCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	3957053	3946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ES.17085.1	chr19	+	2182	11	NNC	ENSMUSG00000036908.18	novel	786	6	NA	NA	-22639	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.05977667184395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGGTGTAGGTTGTGTT	3729	False	NA	NA	False	AATAAA	-18	NA	3962546	3999338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3962632_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ES.17085.2	chr19	+	2523	10	NIC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	-7	0	intron_retention	FALSE	canonical	2	7	junction_5	7.0728135390398	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGTAGGTTGTGTTC	5178	False	NA	NA	False	AATAAA	-19	NA	3985178	3999339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ES.17085.3	chr19	+	3712	3	FSM	ENSMUSG00000036908.18	ENSMUST00000162193.2	747	3	3	-2968	3	-1844	multi-exon	FALSE	canonical	2	11	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTTTAATT	5228	False	NA	NA	False	NA	NA	NA	3985228	3989714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_3985353_3985761_3985904_3986268
ES.17085.4	chr19	+	2202	11	NNC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.05977667184395	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGGGTGTAGGTTGTG	5254	False	NA	NA	False	AATAAA	-16	NA	3985254	3999336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3985362_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ES.17085.5	chr19	+	2491	6	NIC	ENSMUSG00000036908.18	novel	2266	11	NA	NA	-252	0	intron_retention	FALSE	canonical	2	7	junction_1	8.91291198206288	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGTAGGTTGTGTTC	2941	False	NA	NA	False	AATAAA	-19	NA	3991284	3999339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_3992018_3992348_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ES.17085.6	chr19	+	1385	5	NNC	ENSMUSG00000036908.18	novel	1991	10	NA	NA	753	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.2361025271221	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGAGGGTGTAGGTTG	384	False	NA	NA	False	AATAAA	-14	NA	3993192	3999334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_3993295_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ES.17086.1	chr19	-	969	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	17	-3	17	-1	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGTGTTGTTCCATT	NA	False	NA	-2	True	CATAAA	-21	NA	3962717	3958863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
ES.17086.10	chr19	-	835	6	NIC	ENSMUSG00000059734.8	novel	780	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	1174	junction_5	317.835806667531	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962760	3958869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961747_3962709
ES.17086.2	chr19	-	789	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	-6	-3	-6	-1	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGTGTTGTTCCATT	NA	False	NA	-2	True	CATAAA	-21	NA	3962780	3958863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ES.17086.3	chr19	-	991	7	FSM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	13	1	13	-1	multi-exon	FALSE	canonical	3	44	junction_6	705.446824517782	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGTGTTGTTCCATT	NA	False	NA	-2	True	CATAAA	-21	NA	3962475	3958863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962202
ES.17086.4	chr19	-	1046	6	NIC	ENSMUSG00000059734.8	novel	983	7	NA	NA	17	2	intron_retention	FALSE	canonical	3	209	junction_5	707.088000181024	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTTGTGTTGTTCCAT	NA	False	NA	-3	True	CATAAA	-20	NA	3962717	3958864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
ES.17086.5	chr19	-	1709	6	NNC	ENSMUSG00000059734.8	novel	1005	7	NA	NA	17	1	intron_retention	FALSE	canonical	3	4	junction_2	774.931997016512	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGTTGTGTTGTTCCA	NA	False	NA	-4	True	CATAAA	-19	NA	3962717	3958865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3959075_3959152_3959304_3960897_3961071_3961160_3961257_3961565_3961617_3961688
ES.17086.6	chr19	-	843	6	NIC	ENSMUSG00000059734.8	novel	780	7	NA	NA	8	-1	intron_retention	FALSE	canonical	3	1174	junction_5	326.911364134072	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTGTTGTGTTGTTC	NA	False	NA	-6	True	CATAAA	-17	NA	3962760	3958867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ES.17086.7	chr19	-	3355	2	NIC	ENSMUSG00000059734.8	novel	388	5	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTGTTGTGTTGTTC	NA	False	NA	-6	True	CATAAA	-17	NA	3962717	3958867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3961071_3961565
ES.17086.9	chr19	-	2839	3	NIC	ENSMUSG00000059734.8	novel	780	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1174	junction_2	219	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962749	3958869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_3959075_3959152_3961747_3962709
ES.17087.1	chr19	-	2324	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1424	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	2.58198889747161	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTACAGGTGTCTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	3981232	3963494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
ES.17087.3	chr19	-	3822	8	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1057	-49	intron_retention	FALSE	canonical	3	9	junction_4	1.66598625567009	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCCTATCGTCGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	3980865	3963539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3970879_3971182_3971269_3971472_3971808_3973738_3973902_3980715
ES.17087.4	chr19	-	1805	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	67	52	-14	-52	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACAGCCTATCGTCG	NA	False	NA	NA	False	AATAAA	-9	NA	3979741	3963542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
ES.17087.5	chr19	-	1294	10	NNC	ENSMUSG00000024885.10	novel	1924	10	NA	NA	-1051	1644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.47271571378878	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	3980859	3967858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_3968209_3968602_3968701_3968914_3968990_3970420_3970485_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3980715
ES.17088.1	chr19	+	183	1	Intergenic	novelGene_14246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAAGG	7704	False	NA	NA	False	NA	NA	NA	4011117	4011300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4011100_4011300
ES.17089.1	chr19	+	1360	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	-78	2	-78	-2	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGACAGTTCTTGTTC	NA	False	NA	1	True	TATAAA	-15	NA	4036491	4040003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ES.17089.2	chr19	+	1229	7	FSM	ENSMUSG00000024866.11	ENSMUST00000235612.2	1142	7	-91	4	-78	-4	multi-exon	FALSE	canonical	1	7	junction_1	13.4752860204648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATTGACAGTTCTTGT	NA	False	NA	-1	True	TATAAA	-13	NA	4036491	4040001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4036612_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ES.17089.3	chr19	+	509	2	ISM	ENSMUSG00000024866.11	ENSMUST00000054030.8	1505	6	1897	4	1355	-2	3prime_fragment	FALSE	canonical	3	46	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGACAGTTCTTGTTC	NA	False	NA	1	True	TATAAA	-15	NA	4038557	4040003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4038716_4039652
ES.1709.1	chr1	+	138	1	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGCCTTGGTTATGG	NA	False	NA	NA	False	NA	NA	NA	159054447	159054585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_159054400_159054600
ES.1709.11	chr1	+	3080	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-158	2194	-152	346	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059737	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.12	chr1	+	3063	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-146	347	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGTGAGTAATTTTAT	NA	False	NA	NA	False	AAGAAA	-4	NA	159059743	159173017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.13	chr1	+	2738	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-146	22	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCTGAGCTAGGAA	NA	False	NA	NA	False	AATAAA	-33	NA	159059743	159172692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.14	chr1	+	5101	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-143	346	intron_retention	FALSE	canonical	3	166	junction_4	53.8387223538167	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059746	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.15	chr1	+	3183	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-142	346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	122.816082008831	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059747	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135962_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.16	chr1	+	2831	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-139	14	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	105.035755816769	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059750	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.17	chr1	+	8173	8	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-136	10	intron_retention	FALSE	canonical	2	14	junction_7	139.710633899105	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATCATAACACATTCCT	NA	False	NA	NA	False	NA	NA	NA	159059753	159101312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326
ES.1709.18	chr1	+	6876	9	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	10	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	134.203902700331	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATCATAACACATTCCT	NA	False	NA	NA	False	NA	NA	NA	159059758	159101312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678
ES.1709.19	chr1	+	2961	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	346	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	89.1384690617169	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059758	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.2	chr1	+	2378	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGCCCCTTTGTATCA	NA	False	NA	NA	False	NA	NA	NA	159054447	159056825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_159054400_159056800
ES.1709.21	chr1	+	3083	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	346	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	86.6267824981592	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059758	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172366
ES.1709.22	chr1	+	2949	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	346	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	90.9490428485189	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059758	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.23	chr1	+	5238	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-131	-3	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGATATGGTGGCACAC	NA	False	NA	NA	False	ATTAAA	-19	NA	159059758	159175207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.24	chr1	+	4830	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	-17	intron_retention	FALSE	canonical	1	1	junction_14	125.656260667248	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059759	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136455_159136535_159147293_159147411_159152486_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.25	chr1	+	1965	14	ISM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-136	38577	-130	-22	5prime_fragment	FALSE	canonical	3	188	junction_4	45.2278910648895	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATAATTTGAAC	NA	False	NA	NA	False	NA	NA	NA	159059759	159136633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452
ES.1709.26	chr1	+	2779	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	-17	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059759	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.28	chr1	+	2820	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	87.7606288596392	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059759	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170282_159170422_159172390
ES.1709.29	chr1	+	3142	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	346	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.3	chr1	+	2568	21	NNC	ENSMUSG00000040782.13	novel	680	9	NA	NA	-5420	346	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_1	123.155704293386	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159054469	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159054557_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.30	chr1	+	2832	18	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-129	346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.612939937496	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059760	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.31	chr1	+	2622	19	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-127	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.024318216986	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCTTTTAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	159059762	159172645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.32	chr1	+	2613	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-127	14	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	90.9490428485189	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059762	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.34	chr1	+	5202	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-125	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	126.43069335255	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTAGATATGGTGGCAC	NA	False	NA	NA	False	ATTAAA	-17	NA	159059764	159175205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.35	chr1	+	2622	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-124	14	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	89.1384690617169	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059765	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.36	chr1	+	2710	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-122	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.663008646552	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAAAATAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	159059767	159172652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159074513_159074550_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.37	chr1	+	3030	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-121	332	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	137.974946539494	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAGAAAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	159059768	159173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105661_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.38	chr1	+	5240	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-126	2	-120	-2	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATATGGTGGCACACT	NA	False	NA	NA	False	ATTAAA	-20	NA	159059769	159175208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.39	chr1	+	5828	19	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-119	6870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	87.4053456285395	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTCTGCATATGAAT	NA	False	NA	NA	False	NA	NA	NA	159059770	159160394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159156942
ES.1709.4	chr1	+	2205	21	NNC	ENSMUSG00000040782.13	novel	680	9	NA	NA	-5408	-17	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	122.194465913968	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159054481	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159054557_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.41	chr1	+	2686	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-116	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	89.2915793878935	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059773	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170359_159170422_159172390
ES.1709.42	chr1	+	5599	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-116	6412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	111.131127159868	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATTATGGTGTTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	159059773	159181622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390_159172485_159178437
ES.1709.43	chr1	+	3190	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-122	2048	-116	492	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGATGATCACCATCAGA	NA	False	NA	NA	False	TTTAAA	-34	NA	159059773	159173162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.44	chr1	+	5080	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-116	-60	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	89.1384690617169	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTGTAGAATTATTGT	NA	False	NA	NA	False	AATAAA	-16	NA	159059773	159175150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.45	chr1	+	2584	19	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-115	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	129.43644467412	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059774	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135962_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154769_159156171_159156333_159170376_159170422_159172390
ES.1709.46	chr1	+	5270	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-115	-51	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTATTGTAAATTGACC	NA	False	NA	NA	False	AATAAA	-25	NA	159059774	159175159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.47	chr1	+	2603	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-115	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	87.1449367433358	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059774	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156212_159156288_159156333_159170376_159170422_159172390
ES.1709.49	chr1	+	2906	14	ISM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-118	37618	-112	937	5prime_fragment	FALSE	canonical	3	188	junction_4	45.2278910648895	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGACTCACATCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	159059777	159137592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452
ES.1709.5	chr1	+	2459	20	NNC	ENSMUSG00000040782.13	novel	680	9	NA	NA	-5407	346	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	89.0705780100029	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159054482	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159054557_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.50	chr1	+	3122	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-112	332	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	105.035755816769	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAGAAAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	159059777	159173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.51	chr1	+	2772	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-108	-17	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	90.4947619426571	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059781	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060532_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.52	chr1	+	2447	18	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-107	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.612939937496	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059782	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.53	chr1	+	2593	19	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-105	3649	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	87.4053456285395	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAATTAACATACTT	NA	False	NA	NA	False	NA	NA	NA	159059784	159157173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159156942
ES.1709.56	chr1	+	4737	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-99	14	intron_retention	FALSE	canonical	3	188	junction_4	50.2076244763239	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059790	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.57	chr1	+	3216	23	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-99	34472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	122.349722294146	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	159059790	159209682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390_159172489_159178437_159178517_159200883_159200919_159209079
ES.1709.58	chr1	+	3009	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-87	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	89.4052369768794	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059802	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105711_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.59	chr1	+	2961	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-64	346	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_10	126.308464699907	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059825	159173016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.6	chr1	+	4604	20	NNC	ENSMUSG00000040782.13	novel	680	9	NA	NA	-5406	-60	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	87.3049547543193	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTGTAGAATTATTGT	NA	False	NA	NA	False	AATAAA	-16	NA	159054483	159175150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159054557_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.60	chr1	+	2602	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-51	-17	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	125.565358597737	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059838	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.61	chr1	+	5139	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-43	-24	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	124.595789669331	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAATTAAGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	159059846	159175186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.63	chr1	+	2806	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-9	332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.1449367433358	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAGAAAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	159059880	159173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060178_159060294_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.64	chr1	+	2791	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-5	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	121.768828112945	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059884	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170282_159170422_159172390
ES.1709.65	chr1	+	2868	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	33	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	88.850086945025	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAGAAAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	159059928	159173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134149_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.66	chr1	+	2439	20	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	149	14	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	124.595789669331	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159060044	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.69	chr1	+	169	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAGAATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	159107530	159107699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_159107500_159107700
ES.1709.7	chr1	+	4483	19	NNC	ENSMUSG00000040782.13	novel	680	9	NA	NA	-5403	332	intron_retention	FALSE	canonical	3	11	junction_1	90.9472103020669	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAGAAAAATGTACT	NA	False	NA	NA	False	NA	NA	NA	159054486	159173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_159054557_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.70	chr1	+	382	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAAACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	159121374	159121756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_159121400_159121800
ES.1709.8	chr1	+	2767	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-177	2526	-171	14	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGCCACAGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	159059718	159172684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.1709.9	chr1	+	2687	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-158	-17	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	90.2238521140874	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	159059731	159172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147317_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ES.17090.1	chr19	+	988	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	-201	0	-201	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3312	False	NA	9	True	ATTAAA	-18	NA	4050378	4052103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ES.17090.2	chr19	+	3595	14	Fusion	ENSMUSG00000024871.12_ENSMUSG00000110949.2	novel	1469	11	NA	NA	-195	0	multi-exon	FALSE	canonical	0	0	junction_7	30.0512382952337	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGAGTCTGCCCTTTCC	3318	False	NA	NA	False	AATAAA	-16	NA	4050384	4057005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795_4053402_4053510_4053815_4053944_4054025_4054095_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056174_4056268_4056357_4056440_4056551_4056649_4056718
ES.17090.3	chr19	+	1127	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	-45	0	6	0	multi-exon	FALSE	canonical	3	76	junction_1	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTGGCATCTTCCGT	3519	False	NA	7	True	ATTAAA	-16	NA	4050585	4052101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4051329_4051627_4051706_4051795
ES.17090.4	chr19	+	3450	14	Fusion	ENSMUSG00000024871.12_ENSMUSG00000110949.2	novel	1469	11	NA	NA	13	-1	multi-exon	FALSE	canonical	0	0	junction_7	30.0512382952337	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCGGAGTCTGCCCTTT	3526	False	NA	NA	False	AATAAA	-14	NA	4050592	4057003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795_4053402_4053510_4053815_4053944_4054025_4054095_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056109_4056268_4056357_4056440_4056551_4056649_4056718
ES.17090.5	chr19	+	3980	11	Fusion	ENSMUSG00000024871.12_ENSMUSG00000110949.2	novel	1469	11	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_4	30.9678865924041	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGAGTCTGCCCTTTCC	3526	False	NA	NA	False	AATAAA	-16	NA	4050592	4057005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_4051329_4051627_4051706_4051795_4053815_4053944_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056109_4056268_4056357_4056440_4056551_4056649_4056718
ES.17090.6	chr19	+	4215	8	NIC	ENSMUSG00000024869.11	novel	3904	9	NA	NA	4	5	intron_retention	FALSE	canonical	0	0	junction_5	35.0579694861211	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAAAAGGAAGCCC	3563	False	NA	NA	False	NA	NA	NA	4050629	4055821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4051329_4051627_4051706_4051795_4053402_4053510_4053815_4053944_4054168_4054322_4054433_4054512_4054649_4054762
ES.17090.7	chr19	+	3495	11	Fusion	ENSMUSG00000024871.12_ENSMUSG00000110949.2	novel	1589	10	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_5	24.5936983798696	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCGGAGTCTGCCCTTT	3575	False	NA	NA	False	AATAAA	-14	NA	4050641	4057003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_4050848_4051627_4051706_4051795_4053815_4053944_4054025_4054095_4054168_4054322_4054649_4054762_4054817_4056060_4056268_4056357_4056440_4056551_4056649_4056729
ES.17090.8	chr19	+	1242	8	NIC	ENSMUSG00000024871.12	novel	1469	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_1	2.39045721866879	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCGGAGTCTGCCCTTT	6781	False	NA	NA	False	AATAAA	-14	NA	4053847	4057003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056109_4056268_4056357_4056440_4056551_4056649_4056718
ES.17090.9	chr19	+	1113	1	NIC	ENSMUSG00000024871.12	novel	1469	11	NA	NA	846	33	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAAAAGGAAGCCC	7642	False	NA	NA	False	NA	NA	NA	4054708	4055821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4054700_4055800
ES.17091.1	chr19	-	3569	6	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-15	2	intron_retention	FALSE	canonical	3	1340	junction_2	97.6348298508273	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGGAACTTTGCTT	6509	False	NA	0	True	AATAAA	-27	NA	4062723	4057499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4061429_4062550
ES.17091.10	chr19	-	3476	7	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	1340	junction_2	90.5704145954958	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6528	False	NA	-1	True	AATAAA	-26	NA	4062704	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4061273_4061345_4061429_4062550
ES.17091.12	chr19	-	1185	8	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	642.985384034219	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6520	False	NA	-1	True	AATAAA	-26	NA	4062712	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4057916_4058047_4058126_4058342_4058510_4058593_4058807_4061101_4061273_4061345_4061429_4062550
ES.17091.13	chr19	-	3952	3	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-5	1	intron_retention	FALSE	canonical	3	1367	junction_2	97.5	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6554	False	NA	-1	True	AATAAA	-26	NA	4062678	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4061429_4062550
ES.17091.15	chr19	-	3792	5	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	1367	junction_4	71.6427770260199	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6557	False	NA	-1	True	AATAAA	-26	NA	4062675	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058510_4058593_4061273_4061345_4061429_4062550
ES.17091.17	chr19	-	2746	8	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	1250	junction_5	107.163997914316	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6561	False	NA	-1	True	AATAAA	-26	NA	4062671	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4061273_4061345_4061429_4062550
ES.17091.18	chr19	-	1568	10	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	451.977902879508	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTCTGGAACTTTGC	6538	False	NA	-2	True	AATAAA	-25	NA	4062694	4057501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057940_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.2	chr19	-	1654	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	3	4	3	1	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6429	False	NA	-1	True	AATAAA	-26	NA	4062803	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.20	chr19	-	3973	7	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1250	junction_5	96.9445717923391	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTCTGGAACTTTGC	6536	False	NA	-2	True	AATAAA	-25	NA	4062696	4057501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058510_4058593_4058807_4059343_4059534_4059825_4061273_4061345
ES.17091.22	chr19	-	5162	1	NIC	ENSMUSG00000037916.15	novel	1619	10	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6568	False	NA	-3	True	AATAAA	-24	NA	4062664	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057500_4062700
ES.17091.23	chr19	-	1548	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	454.613497488543	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6553	False	NA	-3	True	AATAAA	-24	NA	4062679	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058827_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.24	chr19	-	1432	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	451.201797124518	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6538	False	NA	-3	True	AATAAA	-24	NA	4062694	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058498_4058692_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.25	chr19	-	3739	5	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1340	junction_2	86.6328459650264	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6549	False	NA	-3	True	AATAAA	-24	NA	4062683	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058510_4058593_4061429_4062550
ES.17091.26	chr19	-	4240	6	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1340	junction_2	77.3651084145818	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6560	False	NA	-3	True	AATAAA	-24	NA	4062672	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058510_4058593_4058807_4059343_4061273_4061345
ES.17091.27	chr19	-	5055	2	FSM	ENSMUSG00000037916.15	ENSMUST00000148283.2	412	2	-4643	0	0	0	multi-exon	FALSE	canonical	3	1562	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6571	False	NA	-3	True	AATAAA	-24	NA	4062661	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4057666_4057769
ES.17091.28	chr19	-	4764	4	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	24	junction_2	700.742939077282	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6561	False	NA	-3	True	AATAAA	-24	NA	4062671	4057502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4058126_4058342_4058510_4058593
ES.17091.29	chr19	-	4648	5	NIC	ENSMUSG00000037916.15	novel	1436	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1340	junction_2	99.9662443027645	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTTGTCTGGAACTTT	6559	False	NA	-4	True	AATAAA	-23	NA	4062673	4057503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4061273_4061345
ES.17091.3	chr19	-	3958	3	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1367	junction_2	43	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6568	False	NA	-1	True	AATAAA	-26	NA	4062664	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4058510_4058593_4061429_4062550
ES.17091.30	chr19	-	3353	7	NIC	ENSMUSG00000037916.15	novel	1619	10	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_6	554.013061418431	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTTGTCTGGAACTTT	6601	False	NA	-4	True	AATAAA	-23	NA	4062631	4057503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4061273_4061345_4061425_4062593
ES.17091.31	chr19	-	3798	7	ISM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	2	8	1	-2	intron_retention	FALSE	canonical	3	1250	junction_6	118.5	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTGTCTGGAACTT	6568	False	NA	-5	True	AATAAA	-22	NA	4062664	4057504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825
ES.17091.32	chr19	-	4981	3	NIC	ENSMUSG00000037916.15	novel	1436	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1453	junction_2	54.5	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTGTCTGGAACTT	6559	False	NA	-5	True	AATAAA	-22	NA	4062673	4057504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058510_4058593
ES.17091.33	chr19	-	4048	2	NIC	ENSMUSG00000037916.15	novel	460	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1367	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTGTCTGGAACTT	6558	False	NA	-5	True	AATAAA	-22	NA	4062674	4057504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4061429_4062550
ES.17091.34	chr19	-	3027	7	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1367	junction_6	85.0145412398504	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTGTCTGGAACTT	6568	False	NA	-5	True	AATAAA	-22	NA	4062664	4057504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058130_4058342_4058510_4058593_4058807_4059343_4061273_4061345_4061429_4062550
ES.17091.36	chr19	-	1529	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	442.89677754027	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6568	False	NA	-7	True	AATAAA	-20	NA	4062664	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057686_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.37	chr19	-	2335	8	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	515.312071091145	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6568	False	NA	-7	True	AATAAA	-20	NA	4062664	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4060010_4061104_4061273_4061345_4061429_4062550
ES.17091.38	chr19	-	1655	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	1250	junction_5	111.142926000713	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6554	False	NA	-7	True	AATAAA	-20	NA	4062678	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.39	chr19	-	4143	6	ISM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	-53	10	-11	-4	intron_retention	FALSE	canonical	3	1340	junction_2	97.2555396879787	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6513	False	NA	-7	True	AATAAA	-20	NA	4062719	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343
ES.17091.4	chr19	-	4960	2	NIC	ENSMUSG00000037916.15	novel	1436	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	1579	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6559	False	NA	-1	True	AATAAA	-26	NA	4062673	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4058130_4058342
ES.17091.40	chr19	-	1381	8	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	8	-4	intron_retention	FALSE	canonical	1	4	junction_5	509.683214940258	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6579	False	NA	-7	True	AATAAA	-20	NA	4062653	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059825_4060010_4061101_4061429_4062550
ES.17091.41	chr19	-	3760	5	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1340	junction_2	85.6927651555252	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6535	False	NA	-7	True	AATAAA	-20	NA	4062697	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4061273_4061345_4061429_4062550
ES.17091.42	chr19	-	1378	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	480.894202891863	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6509	False	NA	-7	True	AATAAA	-20	NA	4062723	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.43	chr19	-	1630	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	1250	junction_5	96.4737658640938	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6551	False	NA	-7	True	AATAAA	-20	NA	4062681	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.44	chr19	-	3659	6	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	1340	junction_2	77.6747063077808	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAGCTTGTCTGGAAC	6552	False	NA	-7	True	AATAAA	-20	NA	4062680	4057506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058510_4058593_4061273_4061345_4061429_4062550
ES.17091.49	chr19	-	1511	10	NNC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	427.407458758582	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACCATAGCTTGTCTGG	6551	False	NA	-10	True	AATAAA	-17	NA	4062681	4057509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058498_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ES.17091.5	chr19	-	2621	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-5	1	intron_retention	FALSE	canonical	3	1250	junction_6	104.39520762468	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6554	False	NA	-1	True	AATAAA	-26	NA	4062678	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4061273_4061345_4061429_4062550
ES.17091.6	chr19	-	2983	7	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	1340	junction_2	95.3886785735079	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6557	False	NA	-1	True	AATAAA	-26	NA	4062675	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4061429_4062550
ES.17091.8	chr19	-	3894	4	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	1367	junction_3	79.7927871983984	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6528	False	NA	-1	True	AATAAA	-26	NA	4062704	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4058510_4058593_4061429_4062550
ES.17091.9	chr19	-	2915	8	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	-7	1	intron_retention	FALSE	canonical	3	1340	junction_2	88.8546164087317	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTCTGGAACTTTGCT	6552	False	NA	-1	True	AATAAA	-26	NA	4062680	4057500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4061273_4061345_4061429_4062550
ES.17092.1	chr19	+	175	1	Intergenic	novelGene_14247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGGACTGAGTGAAC	228	False	NA	NA	False	NA	NA	NA	4066645	4066820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4066600_4066800
ES.17092.2	chr19	+	334	1	Intergenic	novelGene_14248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTCTTAGGTCCAGT	229	False	NA	NA	False	NA	NA	NA	4066646	4066980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4066600_4067000
ES.17093.1	chr19	-	189	1	Intergenic	novelGene_14249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTTAAAGAAGAATGA	6392	False	NA	NA	False	NA	NA	NA	4072112	4071923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4071900_4072100
ES.17094.1	chr19	-	896	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	-75	0	-75	0	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4088060	4085406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ES.17094.7	chr19	-	709	7	NNC	ENSMUSG00000060803.7	novel	821	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1311.62719127384	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4087925	4085410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087337_4087397_4087584_4087621_4087862
ES.17095.1	chr19	-	841	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	-45	1	-45	-1	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGTCTTTGGTGCCGT	NA	False	NA	NA	False	AATAAA	-15	NA	4092308	4090285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ES.17095.10	chr19	-	888	8	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	1378.94109033426	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096010	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092672_4095923
ES.17095.11	chr19	-	747	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_5	1308.39024759435	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096010	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4095923
ES.17095.13	chr19	-	942	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	17	-2	intron_retention	FALSE	canonical	3	1174	junction_5	1038.62948157656	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4092246	4090288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ES.17095.14	chr19	-	755	7	NNC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1260.7254084675	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4092232	4090288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091932_4092164
ES.17095.15	chr19	-	1194	3	NIC	ENSMUSG00000038155.12	novel	488	4	NA	NA	-14	-2	intron_retention	FALSE	canonical	2	15	junction_2	1920	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4092232	4090288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4090816_4091397
ES.17095.17	chr19	-	174	1	Intergenic	novelGene_14250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4093538	4093364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4093400_4093500
ES.17095.2	chr19	-	975	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1174	junction_5	937.490565285859	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4092231	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091939_4092164
ES.17095.4	chr19	-	1681	3	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	3274	junction_2	290.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4092233	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4091486_4091583
ES.17095.6	chr19	-	1053	8	NNC	ENSMUSG00000038155.12	novel	797	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1388.34813019366	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096013	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092834_4095923
ES.17095.8	chr19	-	777	7	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	1259.85811590918	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096004	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4095923
ES.17095.9	chr19	-	890	8	NNC	ENSMUSG00000038155.12	novel	797	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1388.34813019366	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4096020	4090286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092566_4092664_4095923
ES.17096.1	chr19	+	174	2	Intergenic	novelGene_14251	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAGAGAGAAAGAGCTT	1188	False	NA	NA	False	NA	NA	NA	4098992	4099554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4099088_4099475
ES.17097.1	chr19	-	851	4	NIC	ENSMUSG00000058216.14	novel	685	6	NA	NA	171	7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	34.9221356098901	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTTGTCCTTAATCCT	9395	False	NA	NA	False	NA	NA	NA	4109124	4107469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108734
ES.17097.4	chr19	-	683	6	NIC	ENSMUSG00000058216.14	novel	685	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	25.7029181222678	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGCAGGGCTTGTCC	9061	False	NA	NA	False	NA	NA	NA	4109458	4107477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109423
ES.17098.1	chr19	+	179	1	Intergenic	novelGene_14252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGATGTATTT	1795	False	NA	NA	False	NA	NA	NA	4142100	4142279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4142100_4142300
ES.17099.1	chr19	+	176	1	Intergenic	novelGene_14253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACAGGGAGAT	5266	False	NA	NA	False	NA	NA	NA	4145571	4145747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4145600_4145700
ES.171.1	chr1	-	6535	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-36	-7	-36	7	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGGCTTCACTGGTGTG	NA	False	NA	2	True	AATAAA	-31	NA	21149489	21066515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.10	chr1	-	1482	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	-41	2942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.7566152775374	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGAGCCGCCAGAT	NA	False	NA	-2	True	AATAAA	-21	NA	21149494	21071594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_21071860_21073193_21073379_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.11	chr1	-	1414	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	5	5073	5	2941	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCCTGAGCCGCCAGA	NA	False	NA	-3	True	AATAAA	-20	NA	21149448	21071595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.12	chr1	-	1417	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	-6	2940	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.9128480908948	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCCCCTGAGCCGCCAG	NA	False	NA	-4	True	AATAAA	-19	NA	21149459	21071596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076452_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.13	chr1	-	4781	2	ISM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-6	36623	-6	-28609	5prime_fragment	FALSE	canonical	3	87	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21149459	21103145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_21107685_21149217
ES.171.14	chr1	-	176	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGATAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	21131279	21131103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_21131100_21131300
ES.171.2	chr1	-	6093	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	170	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.9128480908948	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCATATTTATGCTT	NA	False	NA	NA	False	NA	NA	NA	21149283	21066747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083732_21107620_21107685_21149217
ES.171.3	chr1	-	5703	11	NNC	ENSMUSG00000041779.6	novel	6492	11	NA	NA	-129	-626	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	24.2396369609778	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGGACATTGTCAGTGT	NA	False	NA	NA	False	AATAAA	-40	NA	21114009	21067148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21113936
ES.171.4	chr1	-	5871	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-14	635	-14	-635	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCTCAGACCGGGACAT	NA	False	NA	NA	False	AATAAA	-31	NA	21149467	21067157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.5	chr1	-	3393	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-95	3194	-95	-3194	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGACATGTGAAGGTC	NA	False	NA	NA	False	AGTAAA	-13	NA	21149548	21069716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.6	chr1	-	2982	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-12	3522	-12	-3522	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCTATTCTCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	21149465	21070044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.7	chr1	-	2822	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-13	3683	-13	-3683	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGAGGAATTTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	21149466	21070205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.8	chr1	-	2684	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-12	3820	-12	-3820	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTCTGCCTGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	21149465	21070342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.171.9	chr1	-	2428	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	-1	4065	-1	3949	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCAGGATGCCTCAGG	NA	False	NA	NA	False	TTTAAA	-36	NA	21149454	21070587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ES.1710.1	chr1	-	2976	1	Antisense	novelGene_ENSMUSG00000103572.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAACATTATTTAAACA	NA	False	NA	NA	False	AAAACA	-4	NA	159066121	159063145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_159063100_159066100
ES.17100.1	chr19	+	1406	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	-320	-6	-320	4	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTGTGGTTCCTCTG	6556	False	NA	40	True	AATAAA	-29	NA	4146861	4149023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ES.17100.10	chr19	+	1429	3	ISM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	11	9	10	0	intron_retention	FALSE	canonical	3	90	junction_1	309	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTCAGCCTTTCTGTG	7106	False	NA	27	True	AATAAA	-16	NA	4147411	4149010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4147734_4147816_4147918_4148004
ES.17100.2	chr19	+	1732	3	FSM	ENSMUSG00000024856.11	ENSMUST00000174514.2	669	3	-510	-553	-291	1	multi-exon	FALSE	canonical	3	655	junction_1	26.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCTGTGTGTGGTTC	6585	False	NA	35	True	AATAAA	-24	NA	4146890	4149018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4147508_4147816_4147918_4148004
ES.17100.3	chr19	+	1450	3	NIC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	-284	-1	intron_retention	FALSE	canonical	3	620	junction_2	17.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTTTCTGTGTGTGGT	6592	False	NA	33	True	AATAAA	-22	NA	4146897	4149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4147508_4147816_4148138_4148497
ES.17100.4	chr19	+	1398	2	ISM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-94	-4	-93	-3	intron_retention	FALSE	canonical	3	655	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCCTTTCTGTGTGTG	7002	False	NA	31	True	AATAAA	-20	NA	4147307	4149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4147508_4147816
ES.17100.5	chr19	+	1165	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	-83	7	-83	2	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGCCTTTCTGTGTG	7012	False	NA	29	True	AATAAA	-18	NA	4147317	4149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
ES.17100.6	chr19	+	1580	2	NIC	ENSMUSG00000024856.11	novel	1089	4	NA	NA	-54	3	intron_retention	FALSE	canonical	3	708	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCAGCCTTTCTGTGTGT	7041	False	NA	30	True	AATAAA	-19	NA	4147346	4149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4147918_4148004
ES.17100.7	chr19	+	846	4	FSM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	-1	-2	0	2	multi-exon	FALSE	canonical	3	61	junction_2	272.140078309356	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCAGCCTTTCTGTGTG	7095	False	NA	29	True	AATAAA	-18	NA	4147400	4149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
ES.17100.8	chr19	+	1604	1	NIC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	8	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCAGCCTTTCTGTGTGT	7104	False	NA	30	True	AATAAA	-19	NA	4147409	4149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4147400_4149000
ES.17100.9	chr19	+	1064	4	NIC	ENSMUSG00000024856.11	novel	1089	4	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	256.952654523487	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCCTTTCTGTGTGTG	7105	False	NA	31	True	AATAAA	-20	NA	4147410	4149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4147734_4147816_4147908_4148004_4148138_4148497
ES.17101.1	chr19	+	4196	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	11	-1	11	1	multi-exon	FALSE	canonical	1	1	junction_9	2.52323793539946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCCTTCCTGTCTGGG	1318	False	NA	NA	False	AATAAA	-15	NA	4150008	4163966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
ES.17101.2	chr19	+	11312	8	NNC	ENSMUSG00000024851.15	novel	4981	23	NA	NA	85	-1	intron_retention	FALSE	canonical	0	0	junction_6	2.87139303460597	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGGCCTTCCTGTCTG	1440	False	NA	NA	False	AATAAA	-13	NA	4150130	4163964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4152888_4152974_4153486_4154813_4156626_4156711_4158581_4158664_4160991_4161078_4162511_4162751_4162877_4163484
ES.17101.3	chr19	+	3654	16	NNC	ENSMUSG00000024851.15	novel	4981	23	NA	NA	-2739	-1	intron_retention	FALSE	canonical	0	0	junction_14	2.73739535568637	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGGCCTTCCTGTCTG	810	False	NA	NA	False	AATAAA	-13	NA	4155464	4163964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4155523_4156563_4156626_4156711_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162751_4162877_4163484
ES.17102.1	chr19	-	1961	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	6	-706	6	688	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCCCTCACTCTTCAC	3908	False	NA	NA	False	AATAAA	-17	NA	4171569	4163757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ES.17102.2	chr19	-	1276	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	6	-21	6	3	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAAGGCTGGTCATCA	3908	False	NA	0	True	TATAAA	-38	NA	4171569	4164442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ES.17102.3	chr19	-	1231	6	NNC	ENSMUSG00000024847.16	novel	1261	6	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	113.437912533685	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGCAGAACTAATCTAT	3908	False	NA	-18	True	TATAAA	-20	NA	4171569	4164460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4164797_4165080_4165223_4165319_4165470_4165981_4166171_4168086_4168267_4171335
ES.17102.4	chr19	-	3743	3	NIC	ENSMUSG00000024847.16	novel	1261	6	NA	NA	17	1	intron_retention	FALSE	canonical	3	269	junction_2	22	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	3919	False	NA	-20	True	TATAAA	-18	NA	4171558	4164462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4164797_4165080_4168267_4171335
ES.17102.5	chr19	-	1722	5	NNC	ENSMUSG00000024847.16	novel	1261	6	NA	NA	23	1	intron_retention	FALSE	non_canonical	0	0	junction_4	126.00868025656	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	3925	False	NA	-20	True	TATAAA	-18	NA	4171552	4164462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4164797_4165080_4165223_4165319_4166171_4168086_4168267_4171337
ES.17102.6	chr19	-	3544	3	NIC	ENSMUSG00000024847.16	novel	700	5	NA	NA	15	1	intron_retention	FALSE	canonical	3	269	junction_2	8.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGCAGAACTAATCT	3917	False	NA	-20	True	TATAAA	-18	NA	4171560	4164462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4165497_4165981_4168267_4171335
ES.17102.7	chr19	-	1336	7	NNC	ENSMUSG00000024847.16	novel	1378	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.420204596761	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTTTGCAGAACTAAT	4020	False	NA	-22	True	TATAAA	-16	NA	4171457	4164464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4169076_4169271_4171335
ES.17102.8	chr19	-	2875	1	NIC	ENSMUSG00000024847.16	novel	1378	7	NA	NA	30	-415	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTCCTCTAACATAGC	3932	False	NA	NA	False	NA	NA	NA	4171545	4168670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4168700_4171500
ES.17103.1	chr19	+	961	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	-20	-3	5	-2	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGTTGCACTTTCCT	4350	False	NA	NA	False	AATAAA	-19	NA	4175938	4181729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.10	chr19	+	925	7	NNC	ENSMUSG00000024845.20	novel	938	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.526217727383	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4375	False	NA	NA	False	AATAAA	-16	NA	4175963	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181067_4181227_4181282_4181360
ES.17103.11	chr19	+	1443	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	-25	-544	4	-14	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAATAAACAA	4375	False	NA	NA	False	NA	NA	NA	4175963	4182270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ES.17103.13	chr19	+	1046	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	11	558	-4	0	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4382	False	NA	NA	False	AATAAA	-16	NA	4175970	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.14	chr19	+	3653	7	NNC	ENSMUSG00000024845.20	novel	1112	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	250.766602419239	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4382	False	NA	NA	False	AATAAA	-16	NA	4175970	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4178302_4181075_4181227_4181282_4181360
ES.17103.15	chr19	+	1029	5	NNC	ENSMUSG00000024845.20	novel	874	6	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	330.177509076557	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4383	False	NA	NA	False	AATAAA	-16	NA	4175971	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4177055_4177132_4177548_4177840_4181213_4181282_4181360
ES.17103.16	chr19	+	4119	6	NIC	ENSMUSG00000024845.20	novel	1112	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	568	junction_2	69.1647308966065	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4383	False	NA	NA	False	AATAAA	-16	NA	4175971	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4181075_4181227_4181282_4181360
ES.17103.17	chr19	+	881	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	12	579	-3	1	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGACAGTTGCACTTTC	4383	False	NA	NA	False	AATAAA	-17	NA	4175971	4181727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ES.17103.18	chr19	+	3389	7	NNC	ENSMUSG00000024845.20	novel	1112	7	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	252.570397227299	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGACAGTTGCACTTTC	4385	False	NA	NA	False	AATAAA	-17	NA	4175973	4181727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4180260_4180988_4181075_4181227_4181282_4181360
ES.17103.19	chr19	+	886	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	-12	0	2	0	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4388	False	NA	NA	False	AATAAA	-16	NA	4175976	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ES.17103.2	chr19	+	1033	5	NIC	ENSMUSG00000024845.20	novel	874	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	163	junction_2	269.816025283896	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGTTGCACTTTCCT	4364	False	NA	NA	False	AATAAA	-19	NA	4175952	4181729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181227_4181282_4181360
ES.17103.20	chr19	+	4125	6	NIC	ENSMUSG00000024845.20	novel	874	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	163	junction_2	212.875926304503	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4388	False	NA	NA	False	AATAAA	-16	NA	4175976	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4181075_4181227_4181282_4181360
ES.17103.21	chr19	+	988	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	25	-1	5	0	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4395	False	NA	NA	False	AATAAA	-16	NA	4175983	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
ES.17103.22	chr19	+	698	4	NIC	ENSMUSG00000024845.20	novel	800	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	345.360681027821	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4398	False	NA	NA	False	AATAAA	-16	NA	4175986	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4176200_4177055_4177121_4181227_4181282_4181360
ES.17103.3	chr19	+	1563	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	-6	-545	-6	-14	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAATAAACAA	4364	False	NA	NA	False	NA	NA	NA	4175952	4182270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
ES.17103.4	chr19	+	955	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	-26	8	-6	0	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4364	False	NA	NA	False	AATAAA	-16	NA	4175952	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.5	chr19	+	1073	6	NIC	ENSMUSG00000024845.20	novel	938	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	163	junction_2	211.997735836966	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4366	False	NA	NA	False	AATAAA	-16	NA	4175954	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.6	chr19	+	1097	8	NNC	ENSMUSG00000024845.20	novel	1488	7	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	318.462249068289	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTTGCACTTTCCTG	4366	False	NA	NA	False	AATAAA	-20	NA	4175954	4181730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4176707_4176886_4177055_4177121_4177575_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.7	chr19	+	1524	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	-4	-582	-4	2	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGAGCTCACAGCAGT	4366	False	NA	NA	False	AATAAA	-32	NA	4175954	4182308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.8	chr19	+	913	7	FSM	ENSMUSG00000024845.20	ENSMUST00000139987.10	1488	7	-3	578	-2	0	multi-exon	FALSE	canonical	3	36	junction_2	239.625691907655	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4368	False	NA	NA	False	AATAAA	-16	NA	4175956	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4176200_4177055_4177121_4177575_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ES.17103.9	chr19	+	3715	7	NNC	ENSMUSG00000024845.20	novel	1112	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	252.570397227299	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4372	False	NA	NA	False	AATAAA	-16	NA	4175960	4181726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4180577_4180991_4181075_4181227_4181282_4181360
ES.17104.1	chr19	-	873	3	ISM	ENSMUSG00000024842.9	ENSMUST00000236071.2	2719	5	2323	2	2086	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGGATGTGGTGGTTTG	3840	False	NA	NA	False	AATAAA	-24	NA	4187239	4185423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4186015_4186112_4186261_4187105
ES.17105.1	chr19	+	2995	7	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-37	-5	intron_retention	TRUE	canonical	3	251	junction_1	131.459013468922	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3538	False	NA	11	True	AATAAA	-12	NA	4198580	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199340_4199544_4199861_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.10	chr19	+	1662	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	194.195205341887	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3597	False	NA	17	True	AATAAA	-18	NA	4198639	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.11	chr19	+	1810	11	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	9	-5	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_4	185.417070411545	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3597	False	NA	11	True	AATAAA	-12	NA	4198639	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200480_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.12	chr19	+	1649	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	194.195205341887	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3597	False	NA	11	True	AATAAA	-12	NA	4198639	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.13	chr19	+	1847	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	140.317354593079	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3601	False	NA	17	True	AATAAA	-18	NA	4198643	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.14	chr19	+	1830	11	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	209.181380624567	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3603	False	NA	11	True	AATAAA	-12	NA	4198645	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200097_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.15	chr19	+	1869	12	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-6	71864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	208.176180947892	1310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCACCATGCCCATGCT	3604	False	NA	NA	False	NA	NA	NA	4198646	4275898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595_4204025_4275864
ES.17105.16	chr19	+	4251	2	NIC	ENSMUSG00000045826.10	novel	1082	2	NA	NA	-4956	-2289	intron_retention	FALSE	canonical	0	0	junction_1	0	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTTTGACCTACTGTT	3604	False	NA	14	True	AATAAA	-15	NA	4198646	4204030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199861
ES.17105.17	chr19	+	2639	8	NNC	ENSMUSG00000024835.16	novel	1709	10	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_3	235.451195168176	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3607	False	NA	18	True	AATAAA	-19	NA	4198649	4204034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200264_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.18	chr19	+	3389	7	NIC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	-3	1	intron_retention	FALSE	canonical	3	402	junction_1	94.2243186349587	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3607	False	NA	17	True	AATAAA	-18	NA	4198649	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200621_4200705_4201499_4201578_4201725_4202520
ES.17105.19	chr19	+	4088	5	NNC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	-3	-5	intron_retention	FALSE	canonical	1	1	junction_3	243.584046070345	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3607	False	NA	11	True	AATAAA	-12	NA	4198649	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200264_4201499_4201578
ES.17105.2	chr19	+	1912	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	-25	1	-25	1	multi-exon	FALSE	canonical	3	251	junction_1	114.751906302248	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3550	False	NA	17	True	AATAAA	-18	NA	4198592	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.20	chr19	+	2818	8	FSM	ENSMUSG00000024835.16	ENSMUST00000236023.2	2814	8	-6	2	-3	-2	multi-exon	FALSE	canonical	3	402	junction_1	88.4835970040522	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTTTGACCTACTGTT	3607	False	NA	14	True	AATAAA	-15	NA	4198649	4204030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.22	chr19	+	2668	7	NIC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	2	junction_6	228.964334922858	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3608	False	NA	11	True	AATAAA	-12	NA	4198650	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200621_4200705_4200826_4201393_4201499_4202520
ES.17105.23	chr19	+	1953	10	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	33	8	-2	-6	intron_retention	FALSE	canonical	3	251	junction_1	120.959129920445	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCAGGTTTGACCTAC	3608	False	NA	10	True	AATAAA	-11	NA	4198650	4204026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
ES.17105.25	chr19	+	2454	8	ISM	ENSMUSG00000024835.16	ENSMUST00000236397.2	1709	10	0	8	0	-6	intron_retention	FALSE	canonical	1	13	junction_3	232.262430743101	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCAGGTTTGACCTAC	3610	False	NA	10	True	AATAAA	-11	NA	4198652	4204026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4198722_4199340_4199544_4199861_4199985_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.26	chr19	+	4120	5	ISM	ENSMUSG00000045826.10_ENSMUSG00000024835.16	ENSMUST00000237125.2	854	6	23	-3204	1	-5	intron_retention	FALSE	canonical	3	402	junction_1	109.396926373642	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3611	False	NA	11	True	AATAAA	-12	NA	4198653	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438
ES.17105.27	chr19	+	3549	5	NNC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	1	-1	intron_retention	FALSE	canonical	2	26	junction_4	233.392909061094	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTTTGACCTACTGTTG	3611	False	NA	15	True	AATAAA	-16	NA	4198653	4204031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198729_4199340_4199544_4199861_4201499_4201578_4201702_4202520
ES.17105.28	chr19	+	887	5	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	248.530682210467	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTGACCTACTGTTGT	3611	False	NA	16	True	AATAAA	-17	NA	4198653	4204032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198736_4199340_4199544_4199861_4199894_4203356_4203490_4203595
ES.17105.29	chr19	+	1722	11	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	189.724115494051	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3612	False	NA	11	True	AATAAA	-12	NA	4198654	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203340_4203490_4203595
ES.17105.3	chr19	+	1900	11	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	402	junction_1	75.9439925208044	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3556	False	NA	18	True	AATAAA	-19	NA	4198598	4204034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.30	chr19	+	2491	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	251	junction_1	120.897364898935	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3612	False	NA	11	True	AATAAA	-12	NA	4198654	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4203490_4203595
ES.17105.32	chr19	+	3382	8	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	159	junction_1	164.846001109013	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTTTGACCTACTGTT	3612	False	NA	14	True	AATAAA	-15	NA	4198654	4204030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578
ES.17105.33	chr19	+	3128	6	NIC	ENSMUSG00000024835.16	novel	1709	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	159	junction_1	172.009999709319	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTTTGACCTACTGTT	3612	False	NA	14	True	AATAAA	-15	NA	4198654	4204030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198722_4199340_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.34	chr19	+	3489	6	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	251	junction_1	138.407514246879	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3612	False	NA	11	True	AATAAA	-12	NA	4198654	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199340_4199544_4199861_4200621_4200705_4201499_4201578_4201725_4202520
ES.17105.35	chr19	+	3012	6	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	251	junction_1	143.211731363042	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	3612	False	NA	17	True	AATAAA	-18	NA	4198654	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199340_4199544_4199861_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.36	chr19	+	1821	11	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	218.329773507875	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3615	False	NA	11	True	AATAAA	-12	NA	4198657	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200615_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ES.17105.37	chr19	+	1725	11	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_10	200.487805115423	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3617	False	NA	11	True	AATAAA	-12	NA	4198659	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203376_4203595
ES.17105.38	chr19	+	3404	5	NNC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	1	junction_2	266.348807956784	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3619	False	NA	11	True	AATAAA	-12	NA	4198661	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4199544_4199861_4199985_4200264_4200826_4201393_4201725_4202520
ES.17105.39	chr19	+	1931	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	-5	intron_retention	FALSE	canonical	3	402	junction_1	79.8759841223016	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3624	False	NA	11	True	AATAAA	-12	NA	4198666	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
ES.17105.4	chr19	+	4224	6	NIC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	402	junction_1	99.5943773513344	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTGACCTACTGTTGT	3567	False	NA	16	True	AATAAA	-17	NA	4198609	4204032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200621_4200705_4201499_4201578
ES.17105.40	chr19	+	764	3	ISM	ENSMUSG00000024835.16	ENSMUST00000236397.2	1709	10	3864	1	-544	1	3prime_fragment	FALSE	canonical	3	564	junction_2	5.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACCTACTGTTGTG	710	False	NA	17	True	AATAAA	-18	NA	4202516	4204033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4202579_4203225_4203490_4203595
ES.17105.41	chr19	+	177	1	Antisense	novelGene_ENSMUSG00000117905.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	3141	False	NA	NA	False	NA	NA	NA	4218980	4219157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_4219000_4219200
ES.17105.42	chr19	+	1426	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	51	-4	-43	4	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTCTCTCTTGTCC	3328	False	NA	35	True	AATAAA	-24	NA	4242114	4245423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.44	chr19	+	1266	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	1534.00737938251	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGTCTCTCTTG	3353	False	NA	32	True	AATAAA	-21	NA	4242139	4245420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.47	chr19	+	1380	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1467.92431874247	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATAGCCTCTGTCTCT	3361	False	NA	28	True	AATAAA	-17	NA	4242147	4245416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243865_4244465_4244690_4244770_4244906_4244980
ES.17105.49	chr19	+	1397	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1475.23350317463	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3366	False	NA	30	True	AATAAA	-19	NA	4242152	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4242290_4242748_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.5	chr19	+	2667	8	NNC	ENSMUSG00000024835.16	novel	2814	8	NA	NA	4	-5	intron_retention	FALSE	canonical	1	1	junction_3	207.554762874372	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3579	False	NA	11	True	AATAAA	-12	NA	4198621	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200264_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.50	chr19	+	1969	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	3675	junction_3	190.897878458615	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3375	False	NA	30	True	AATAAA	-19	NA	4242161	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4244690_4244770_4244906_4244980
ES.17105.51	chr19	+	2662	3	NIC	ENSMUSG00000040385.8	novel	1318	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	3675	junction_1	8.5	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3375	False	NA	30	True	AATAAA	-19	NA	4242161	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4243252_4243765_4244690_4244770
ES.17105.52	chr19	+	2634	3	FSM	ENSMUSG00000040385.8	ENSMUST00000235739.2	808	3	-36	-1790	-5	0	multi-exon	FALSE	canonical	3	3983	junction_1	58	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3380	False	NA	30	True	AATAAA	-19	NA	4242166	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4242271_4242743_4242876_4243020
ES.17105.55	chr19	+	2095	4	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	3692	junction_3	160.997584522943	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3388	False	NA	30	True	AATAAA	-19	NA	4242174	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4242743_4243871_4244465_4244690_4244770
ES.17105.56	chr19	+	1128	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	111	234	3	82	multi-exon	FALSE	canonical	3	3675	junction_3	183.825475806689	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCGTTAAGTGTCTT	3388	False	NA	NA	False	NA	NA	NA	4242174	4245185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.57	chr19	+	2033	5	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	3675	junction_3	174.827593645854	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATAGCCTCTGTCTCT	3390	False	NA	28	True	AATAAA	-17	NA	4242176	4245416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4244906_4244980
ES.17105.58	chr19	+	1872	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	3692	junction_4	155.095583431637	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3391	False	NA	30	True	AATAAA	-19	NA	4242177	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4242743_4242876_4243020_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.59	chr19	+	1257	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1595.07429294061	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTCTCTCTTGTCC	3392	False	NA	35	True	AATAAA	-24	NA	4242178	4245423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4242271_4242743_4242876_4243020_4243252_4244465_4244690_4244770_4244906_4244980
ES.17105.6	chr19	+	2613	9	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1	-5	intron_retention	FALSE	canonical	3	402	junction_1	84.6935652809586	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3589	False	NA	11	True	AATAAA	-12	NA	4198631	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.60	chr19	+	1300	8	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1388.19324656041	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3408	False	NA	30	True	AATAAA	-19	NA	4242194	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4242271_4242743_4242795_4242835_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.61	chr19	+	1356	7	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1464.33459480938	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3420	False	NA	30	True	AATAAA	-19	NA	4242206	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244953
ES.17105.62	chr19	+	1286	7	FSM	ENSMUSG00000040385.8	ENSMUST00000236181.2	1318	7	32	0	32	0	multi-exon	TRUE	canonical	0	0	junction_1	1475.23350317463	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATAGCCTCTGTCTCTCT	3677	False	NA	30	True	AATAAA	-19	NA	4242463	4245418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4242485_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.63	chr19	+	1115	6	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	364	-2	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	1552.28046434915	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATAGCCTCTGTCTCT	4009	False	NA	28	True	AATAAA	-17	NA	4242795	4245416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4242876_4243116_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ES.17105.64	chr19	+	1792	1	Genic_Genomic	ENSMUSG00000118245.2	novel	NA	NA	NA	NA	-35	295	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	4251742	4253534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_4251700_4253500
ES.17105.65	chr19	+	1641	3	FSM	ENSMUSG00000040663.10	ENSMUST00000126457.2	646	3	-10	-985	-10	8	multi-exon	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTTGCCTAGCTTGGT	2121	False	NA	NA	False	AATAAA	-20	NA	4264637	4273552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4264687_4270231_4270399_4272127
ES.17105.66	chr19	+	3363	2	FSM	ENSMUSG00000040663.10	ENSMUST00000235355.2	380	2	196	-3179	-9	2	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGACTCTTTGCCTAG	2122	False	NA	NA	False	AATAAA	-14	NA	4264638	4273546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4264687_4270231
ES.17105.67	chr19	+	2349	2	NNC	ENSMUSG00000040663.10	novel	3550	2	NA	NA	4739	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGACTCTTTGCCTAG	6870	False	NA	NA	False	AATAAA	-14	NA	4269386	4273546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4271612_4273422
ES.17105.7	chr19	+	1602	10	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	3	6	junction_9	212.641993227938	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3590	False	NA	11	True	AATAAA	-12	NA	4198632	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203595
ES.17105.8	chr19	+	2604	9	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	2	-6	intron_retention	FALSE	canonical	3	159	junction_1	156.640063122434	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCAGGTTTGACCTAC	3590	False	NA	10	True	AATAAA	-11	NA	4198632	4204026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198722_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
ES.17105.9	chr19	+	1828	9	NIC	ENSMUSG00000024835.16	novel	1709	10	NA	NA	9	-5	intron_retention	FALSE	canonical	1	13	junction_3	193.192099993763	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	3597	False	NA	11	True	AATAAA	-12	NA	4198639	4204027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225
ES.17106.1	chr19	+	905	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	5	3	5	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGACCTTACATCTC	NA	False	NA	3	True	AATAAA	-15	NA	4281957	4283685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
ES.17106.2	chr19	+	1704	1	NIC	ENSMUSG00000024854.5	novel	913	4	NA	NA	27	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTCTGACCTTACATC	NA	False	NA	1	True	AATAAA	-13	NA	4281979	4283683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4282000_4283700
ES.17107.1	chr19	-	1977	14	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	1	106	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCAGTGCCTGTCTGG	2774	False	NA	NA	False	NA	NA	NA	4213328	4206684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.11	chr19	-	2489	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_8	33.8102956904336	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2774	False	NA	-2	True	AGTAAA	-14	NA	4213328	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.12	chr19	-	2212	5	ISM	ENSMUSG00000024830.18	ENSMUST00000135911.8	1143	11	2756	-190	-1422	-1	intron_retention	FALSE	canonical	3	85	junction_4	14.8408220796558	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGAGTGGCTTTTGCCGG	6529	False	NA	-3	True	AGTAAA	-13	NA	4209573	4206794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064
ES.17107.14	chr19	-	2540	11	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	79	junction_5	11.7796434581018	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGAGTGGCTTTTGCCG	2777	False	NA	-4	True	AGTAAA	-12	NA	4213325	4206795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258
ES.17107.15	chr19	-	1647	14	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.2692036454243	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGAGTGGCTTTTGCCG	2774	False	NA	-4	True	AGTAAA	-12	NA	4213328	4206795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.2	chr19	-	1787	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	20	2779	-4	22	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACAAGAGTGGCATGTT	2769	False	NA	23	True	AGTAAA	-39	NA	4213333	4206768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.3	chr19	-	1871	14	NNC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	4	-1	intron_retention	FALSE	canonical	2	3	junction_9	26.5922531763309	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCTTTTGCCGGACT	2777	False	NA	0	True	AGTAAA	-16	NA	4213325	4206791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211062_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.4	chr19	-	1809	15	NNC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	26.1413934016454	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCTTTTGCCGGACT	2702	False	NA	0	True	AGTAAA	-16	NA	4213400	4206791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208849_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.5	chr19	-	1792	13	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	5	0	intron_retention	FALSE	canonical	2	12	junction_8	24.8231242997331	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2792	False	NA	-2	True	AGTAAA	-14	NA	4213310	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.6	chr19	-	2608	7	NIC	ENSMUSG00000024830.18	novel	2090	14	NA	NA	-2025	0	intron_retention	FALSE	canonical	3	85	junction_4	12.7758452644912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	5926	False	NA	-2	True	AGTAAA	-14	NA	4210176	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4209093_4209225_4209327_4209401
ES.17107.7	chr19	-	2485	12	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_8	35.7981023551725	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2775	False	NA	-2	True	AGTAAA	-14	NA	4213327	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601
ES.17107.8	chr19	-	1972	15	NNC	ENSMUSG00000024830.18	novel	2090	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	34.3514993880046	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2775	False	NA	-2	True	AGTAAA	-14	NA	4213327	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208366_4208608_4208717_4208849_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ES.17107.9	chr19	-	1983	15	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_9	38.3506911307226	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2794	False	NA	-2	True	AGTAAA	-14	NA	4213308	4206793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212718_4212820_4212862_4213166
ES.17108.1	chr19	-	4846	7	NIC	ENSMUSG00000075289.6	novel	3968	10	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCGGAGTCCAGTGTTT	6162	False	NA	NA	False	AATAAA	-19	NA	4225472	4214322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4216564_4219526_4219808_4219897_4221170_4221612_4221899_4222144_4222235_4222623_4223220_4225392
ES.17108.2	chr19	-	4579	9	NIC	ENSMUSG00000075289.6	novel	3968	10	NA	NA	-42	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTATCCGGAGTCCA	6114	False	NA	NA	False	AATAAA	-13	NA	4225520	4214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4216564_4219526_4219808_4219897_4220130_4220824_4220911_4220994_4221899_4222144_4222235_4222623_4223220_4225003_4225031_4225392
ES.17108.3	chr19	-	3952	4	NIC	ENSMUSG00000075289.6	novel	3968	10	NA	NA	-930	-25	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGACTTGTTAACTA	8828	False	NA	NA	False	NA	NA	NA	4222806	4214347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4216564_4219526_4219808_4219897_4221170_4222623
ES.17109.1	chr19	-	1743	10	FSM	ENSMUSG00000040247.7	ENSMUST00000235450.2	1996	10	240	13	3	7	multi-exon	FALSE	canonical	0	0	junction_2	0.785674201318386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCACTCTCCACCCTGGC	NA	False	NA	NA	False	AATAAA	-42	NA	4241043	4234368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4235073_4235350_4235506_4237940_4238131_4238244_4238311_4238942_4239058_4239211_4239319_4239404_4239513_4239862_4239963_4240662_4240835_4241017
ES.17109.2	chr19	-	960	3	NNC	ENSMUSG00000040247.7	novel	993	3	NA	NA	-190	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAGTTGGATCAAATA	NA	False	NA	NA	False	AATAAA	-20	NA	4235721	4234390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4235073_4235350_4235506_4235598
ES.1711.1	chr1	-	1153	1	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGCTACAATGAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	159089650	159088497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_159088500_159089600
ES.17110.1	chr19	-	6180	4	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	364	junction_2	44.5495978283381	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5990	False	NA	0	True	AATAAA	-15	NA	4251643	4245194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4247250_4247337_4251399_4251481
ES.17110.10	chr19	-	2370	10	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	334	junction_4	41.9499996321311	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5978	False	NA	-2	True	AATAAA	-13	NA	4251655	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251399_4251481
ES.17110.11	chr19	-	2161	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	-38	-22	-9	-2	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5989	False	NA	-2	True	AATAAA	-13	NA	4251644	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.13	chr19	-	2181	12	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	159.842122521666	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5994	False	NA	-2	True	AATAAA	-13	NA	4251639	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251148_4251247_4251327_4251399_4251481
ES.17110.14	chr19	-	2062	11	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.83103607325	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6001	False	NA	-2	True	AATAAA	-13	NA	4251632	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250284_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.16	chr19	-	2261	12	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	164.646076717644	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6000	False	NA	-2	True	AATAAA	-13	NA	4251633	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4247869_4248054_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.17	chr19	-	2143	9	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	3	-2	intron_retention	FALSE	canonical	1	2	junction_8	139.676188020722	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6030	False	NA	-2	True	AATAAA	-13	NA	4251603	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4250982_4251327
ES.17110.18	chr19	-	2012	11	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	129.436664048484	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5990	False	NA	-2	True	AATAAA	-13	NA	4251643	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4250982_4251327_4251399_4251481
ES.17110.19	chr19	-	2464	9	NIC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	364	junction_3	33.1879119560119	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6035	False	NA	-2	True	AATAAA	-13	NA	4251598	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4251057_4251327_4251399_4251481
ES.17110.2	chr19	-	4861	9	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	14	junction_7	139.810362634534	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5961	False	NA	0	True	AATAAA	-15	NA	4251672	4245194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4250371_4250463_4250579_4250927_4251057_4251148_4251399_4251481
ES.17110.20	chr19	-	2031	12	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.146505250607	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5996	False	NA	-2	True	AATAAA	-13	NA	4251637	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4245292_4245629_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4249388_4249584_4250270_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.22	chr19	-	2172	11	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	199.903201575162	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6036	False	NA	-2	True	AATAAA	-13	NA	4251597	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247254_4247475_4247586_4247669_4247780_4249388_4249581_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.23	chr19	-	4914	9	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	334	junction_4	44.1090622774958	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6003	False	NA	-2	True	AATAAA	-13	NA	4251630	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4250371_4250463_4251057_4251327_4251399_4251481
ES.17110.24	chr19	-	2057	10	NIC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	7	junction_8	134.272341635927	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6021	False	NA	-2	True	AATAAA	-13	NA	4251612	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4250985_4251327_4251399_4251481
ES.17110.26	chr19	-	4723	8	NIC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	364	junction_3	33.3552309026849	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGCTGTGTGTTCCCCGT	6001	False	NA	-3	True	AATAAA	-12	NA	4251632	4245197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.27	chr19	-	4643	9	NIC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	364	junction_3	32.5461211206497	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGCTGTGTGTTCCCCG	5996	False	NA	-4	True	AATAAA	-11	NA	4251637	4245198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.28	chr19	-	5082	7	NIC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	364	junction_3	35.9845645921816	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGCTGTGTGTTCCCCG	5990	False	NA	-4	True	AATAAA	-11	NA	4251643	4245198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4250371_4250463_4251057_4251327_4251399_4251481
ES.17110.30	chr19	-	1730	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-3	354	-3	-330	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTCACTGGTGTTG	5995	False	NA	NA	False	NA	NA	NA	4251638	4245548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.31	chr19	-	1565	9	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	1	-330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.058173660067	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTCACTGGTGTTG	5999	False	NA	NA	False	NA	NA	NA	4251634	4245548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247254_4247475_4247586_4247669_4247780_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.32	chr19	-	1611	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-36	506	-10	-482	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCCTGCCTCTAAA	5962	False	NA	0	True	AATACA	-31	NA	4251671	4245700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.33	chr19	-	1598	11	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-11	-488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	130.134699446381	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTCAGTCTCCTGCC	5961	False	NA	-6	True	AATACA	-25	NA	4251672	4245706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250363_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.34	chr19	-	1650	10	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	3	-488	intron_retention	FALSE	canonical	3	334	junction_4	41.9817714705141	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTCAGTCTCCTGCC	6001	False	NA	-6	True	AATACA	-25	NA	4251632	4245706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.35	chr19	-	1432	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	5	644	-4	-620	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTCTGTGTTCTGT	6003	False	NA	NA	False	AAAAAG	-44	NA	4251630	4245838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.37	chr19	-	1323	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-1	759	-1	-735	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGACCAGAAGCAGGCCC	5997	False	NA	NA	False	ATTAAA	-18	NA	4251636	4245953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.38	chr19	-	1253	11	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-1	-742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	170.438405296459	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTCACGGACCAGAAG	6039	False	NA	NA	False	ATTAAA	-11	NA	4251594	4245960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247576_4247669_4247780_4250270_4250360_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.39	chr19	-	2339	1	Intergenic	novelGene_14254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAATTACACATTAAA	9300	False	NA	NA	False	NA	NA	NA	4259965	4257626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4257600_4260000
ES.17110.4	chr19	-	2172	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	-93	2	-67	-2	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5905	False	NA	-2	True	AATAAA	-13	NA	4251728	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.40	chr19	-	177	1	Intergenic	novelGene_14255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGAAGAAGAGGGT	NA	False	NA	NA	False	NA	NA	NA	4288609	4288432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4288400_4288600
ES.17110.5	chr19	-	4806	9	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	334	junction_4	44.350169109035	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6033	False	NA	-2	True	AATAAA	-13	NA	4251600	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4250371_4250463_4250579_4250927_4251399_4251481
ES.17110.6	chr19	-	2443	11	Fusion	ENSMUSG00000117718.2_ENSMUSG00000024824.8	novel	2101	10	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_9	168.523114141651	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	NA	False	NA	-2	True	AATAAA	-13	NA	4307666	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4304060_4304204_4307364
ES.17110.7	chr19	-	2163	10	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_6	136.784502046102	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	5990	False	NA	-2	True	AATAAA	-13	NA	4251643	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247780_4250270_4250363_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.8	chr19	-	2146	10	NNC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	133.103505625797	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6019	False	NA	-2	True	AATAAA	-13	NA	4251614	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4246377_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250579_4250927_4251057_4251327_4251399_4251481
ES.17110.9	chr19	-	2947	8	NNC	ENSMUSG00000024824.8	novel	2101	10	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	150.533201978697	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTGTTCCCCGTG	6021	False	NA	-2	True	AATAAA	-13	NA	4251612	4245196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4246082_4246179_4247245_4247337_4247586_4247669_4247780_4250270_4250579_4250927_4251057_4251327_4251399_4251481
ES.17111.1	chr19	+	1382	2	Intergenic	novelGene_14256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTGTGTGTGATGCTT	5245	False	NA	NA	False	TATAAA	-18	NA	4307777	4309261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4307879_4307980
ES.17112.1	chr19	-	2729	14	NNC	ENSMUSG00000034616.18	novel	2736	14	NA	NA	-100	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	2.5880928986555	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATCTGTCGTTCACT	2250	False	NA	0	True	AATAAA	-39	NA	4319308	4311698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4317903_4318572_4318614_4319042
ES.17112.2	chr19	-	2711	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	16	-22	4	-6	multi-exon	FALSE	canonical	1	1	junction_12	2.03228381748045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGCCATCTGTCGTTC	2366	False	NA	-3	True	AATAAA	-36	NA	4319192	4311701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
ES.17112.3	chr19	-	4302	11	NNC	ENSMUSG00000034616.18	novel	2705	14	NA	NA	-97	2	intron_retention	FALSE	canonical	0	0	junction_4	2.38537208837531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACATTTTCCATTTGT	2253	False	NA	-23	True	AATAAA	-16	NA	4319305	4311721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4312661_4313574_4313846_4313935_4315178_4315319_4315534_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318611_4319042
ES.17112.4	chr19	-	2410	13	NIC	ENSMUSG00000034616.18	novel	2705	14	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	2.3094010767585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACATTTTCCATTTGT	2415	False	NA	-23	True	AATAAA	-16	NA	4319143	4311721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4318572_4318611_4319042
ES.17113.1	chr19	+	3835	1	Genic_Genomic	ENSMUSG00000118344.2	novel	NA	NA	NA	NA	1183	3361	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGCCAGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	4325197	4329032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_4325200_4329000
ES.17114.1	chr19	-	2167	15	NNC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	6.23886763665932	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTGTCCTGCGTGG	886	False	NA	-6	True	AATAAA	-16	NA	4333137	4320208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323564_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332389_4332908
ES.17114.10	chr19	-	4027	6	ISM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	16	7210	16	2076	5prime_fragment	FALSE	canonical	3	11	junction_1	2.60768096208106	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTTTTGGAAAGAGTGC	876	False	NA	NA	False	AGTAAA	-17	NA	4333147	4327417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ES.17114.2	chr19	-	3284	12	NNC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	29	-1	intron_retention	FALSE	canonical	0	0	junction_4	5.69471264122394	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTGTCCTGCGTGG	889	False	NA	-6	True	AATAAA	-16	NA	4333134	4320208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4320578_4320821_4320914_4320993_4322729_4322827_4322890_4323038_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ES.17114.3	chr19	-	2195	14	NIC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	23	-1	intron_retention	FALSE	canonical	2	3	junction_2	4.77790773946755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTGTCCTGCGTGG	883	False	NA	-6	True	AATAAA	-16	NA	4333140	4320208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4320578_4320821_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ES.17114.5	chr19	-	3337	11	NIC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	16	-1	intron_retention	FALSE	canonical	2	3	junction_2	4.80104155366312	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTGTCCTGCGTGG	876	False	NA	-6	True	AATAAA	-16	NA	4333147	4320208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4320578_4320821_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945
ES.17114.6	chr19	-	2121	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	17	1	17	-1	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTGTCCTGCGTGG	877	False	NA	-6	True	AATAAA	-16	NA	4333146	4320208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ES.17114.8	chr19	-	3626	10	NNC	ENSMUSG00000005986.17	novel	2139	15	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	5.77564063038534	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGGCTTGCTGTCCTGCG	859	False	NA	-9	True	AATAAA	-13	NA	4333164	4320211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4322729_4322827_4322890_4323048_4323131_4323562_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ES.17114.9	chr19	-	185	1	Intergenic	novelGene_14257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCTCCTCTGGTCCTT	9922	False	NA	NA	False	NA	NA	NA	4323984	4323799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4323800_4324000
ES.17115.1	chr19	-	3544	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-164	-4	-164	3	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTGTCTCAGACTCTTT	NA	False	NA	-5	True	TATAAA	-17	NA	4356414	4336025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.12	chr19	-	3390	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	62.2372816274677	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356360	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.13	chr19	-	3523	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-165	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.8979474202538	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356415	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4337996_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.14	chr19	-	4059	19	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	202	junction_16	29.4491086452544	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356248	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338536_4338619_4338687_4339340_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.15	chr19	-	3486	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.6476319731136	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356316	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337806_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.17	chr19	-	3893	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-92	-1	intron_retention	FALSE	canonical	3	202	junction_17	29.5864384595412	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCGCTGTCTCAGAC	NA	False	NA	-10	True	TATAAA	-12	NA	4356342	4336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.18	chr19	-	3361	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-96	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.4449763682307	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCGCTGTCTCAGAC	NA	False	NA	-10	True	TATAAA	-12	NA	4356346	4336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356057_4356166
ES.17115.19	chr19	-	3307	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.4449763682307	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCGCTGTCTCAGAC	NA	False	NA	-10	True	TATAAA	-12	NA	4356299	4336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356062_4356178
ES.17115.2	chr19	-	3394	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.6230979083055	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCTGTCTCAGACTCTT	NA	False	NA	-6	True	TATAAA	-16	NA	4356267	4336026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339762_4339921_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.20	chr19	-	3667	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-41	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	60.8979474202538	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCGCTGTCTCAGAC	NA	False	NA	-10	True	TATAAA	-12	NA	4356291	4336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338234_4338408_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.21	chr19	-	4077	18	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-97	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	64.2549528202902	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCGCTGTCTCAGAC	NA	False	NA	-10	True	TATAAA	-12	NA	4356347	4336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4338234_4338408_4338536_4338619_4338687_4339340_4339442_4339700_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.23	chr19	-	3551	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-99	-2	intron_retention	FALSE	canonical	3	202	junction_17	29.3399220334811	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356349	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.24	chr19	-	2590	20	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.3690920932468	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356289	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4336939_4337967_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356062_4356162
ES.17115.25	chr19	-	3458	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	75.0833852408709	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356301	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341478_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.27	chr19	-	3578	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-51	-2	intron_retention	FALSE	non_canonical	2	17	junction_20	57.5399643725993	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356301	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.28	chr19	-	3252	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-80	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_4	76.8274039649915	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356330	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.29	chr19	-	4495	15	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	202	junction_12	29.6644499668666	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356299	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4338687_4339340_4339768_4339925_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.3	chr19	-	3394	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-92	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	62.3787910543897	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCTGTCTCAGACTCTT	NA	False	NA	-6	True	TATAAA	-16	NA	4356342	4336026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4355929
ES.17115.30	chr19	-	4163	17	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-77	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	105.473763769717	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTCGCTGTCTCAGA	NA	False	NA	-11	True	TATAAA	-11	NA	4356327	4336031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4338234_4338408_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4340101_4340525_4340631_4340711_4340799_4340900_4341266_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.31	chr19	-	2538	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-164	1002	-164	-385	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTTGTAATTATT	NA	False	NA	4	True	NA	NA	NA	4356414	4337031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.32	chr19	-	2207	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-114	-398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.4449763682307	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGCGGAAAATGTTTTA	NA	False	NA	-9	True	TATAAA	-42	NA	4356364	4337044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356321
ES.17115.34	chr19	-	3552	15	NNC	ENSMUSG00000024858.15	novel	3476	18	NA	NA	-96	-418	intron_retention	FALSE	non_canonical	0	0	junction_3	69.6741687852705	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTATTTGTTTTCCC	NA	False	NA	-29	True	TATAAA	-22	NA	4356346	4337064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4338234_4338408_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340900_4341266_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.36	chr19	-	2587	19	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-97	-420	intron_retention	FALSE	canonical	0	0	junction_8	63.7298745768438	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTATTTGTTTTC	NA	False	NA	-31	True	TATAAA	-20	NA	4356347	4337066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.38	chr19	-	2294	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-61	-420	at_least_one_novel_splicesite	FALSE	non_canonical	2	17	junction_21	56.2832164460662	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTATTATTTGTTTTC	NA	False	NA	-31	True	TATAAA	-20	NA	4356311	4337066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.41	chr19	-	1936	7	NIC	ENSMUSG00000024858.15	novel	3476	18	NA	NA	190	-421	intron_retention	FALSE	canonical	3	215	junction_4	28.9045363606169	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTATTATTTGTTTT	NA	False	NA	-32	True	TATAAA	-19	NA	4340321	4337067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101
ES.17115.42	chr19	-	2341	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-99	-421	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	62.2372816274677	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTATTATTTGTTTT	NA	False	NA	-32	True	TATAAA	-19	NA	4356349	4337067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.44	chr19	-	2545	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-130	-422	intron_retention	FALSE	canonical	3	202	junction_17	29.3399220334811	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTTATTATTTGTTT	NA	False	NA	-33	True	TATAAA	-18	NA	4356380	4337068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.46	chr19	-	3460	16	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-83	-424	intron_retention	FALSE	non_canonical	0	0	junction_15	69.4577729431503	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTTATTATTTGT	NA	False	NA	-35	True	TATAAA	-16	NA	4356333	4337070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338687_4339340_4339768_4339925_4340554_4340631_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356057_4356166
ES.17115.47	chr19	-	2323	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-68	-427	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	62.3787910543897	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGAATTTTTATTATT	NA	False	NA	-38	True	TATAAA	-13	NA	4356318	4337073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4355929
ES.17115.48	chr19	-	2318	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	2	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.7746657744821	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGAATTTTTATTATT	NA	False	NA	-38	True	TATAAA	-13	NA	4356248	4337073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340811_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.5	chr19	-	3371	22	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-99	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	17	junction_21	56.2832164460662	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGCTGTCTCAGACTCT	NA	False	NA	-7	True	TATAAA	-15	NA	4356349	4336027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929_4356054_4356159
ES.17115.6	chr19	-	3494	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-164	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	60.5518579401161	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGCTGTCTCAGACTCT	NA	False	NA	-7	True	TATAAA	-15	NA	4356414	4336027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340506_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.8	chr19	-	4118	19	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-57	0	intron_retention	FALSE	canonical	3	202	junction_16	30.363639723919	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356307	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17115.9	chr19	-	3370	21	NNC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.8979474202538	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356307	4336029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4337951_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ES.17116.1	chr19	+	162	1	Intergenic	novelGene_14260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATTTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	4378508	4378670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4378500_4378700
ES.17117.1	chr19	+	173	1	Intergenic	novelGene_14261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGAAAC	NA	False	NA	NA	False	NA	NA	NA	4386221	4386394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4386200_4386400
ES.17118.1	chr19	+	159	1	Intergenic	novelGene_14263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4395902	4396061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4395900_4396100
ES.17119.1	chr19	+	176	1	Intergenic	novelGene_14267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGTGAGCGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	4423410	4423586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4423400_4423600
ES.1712.1	chr1	-	176	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGTGTAACT	NA	False	NA	NA	False	NA	NA	NA	159118349	159118173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_159118200_159118300
ES.17120.1	chr19	-	215	1	Intergenic	novelGene_14258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAGAAGGAAATGA	NA	False	NA	NA	False	NA	NA	NA	4360397	4360182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4360200_4360400
ES.17120.10	chr19	-	7402	22	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	1	26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	40.350336552053	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447122	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4438968_4439086_4444819_4444921_4446338
ES.17120.12	chr19	-	6546	21	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-125	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	40.9675481326379	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447248	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400374_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447218
ES.17120.13	chr19	-	6837	21	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	0	26	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	34.4927166224987	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447123	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374813_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.14	chr19	-	7504	13	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	12644	26	intron_retention	FALSE	canonical	0	0	junction_5	49.9090144384982	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4400271	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4375075_4376538_4376589_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204
ES.17120.15	chr19	-	6566	21	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-160	26	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_20	33.0860998003693	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447283	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447218
ES.17120.16	chr19	-	7147	9	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-39	26	intron_retention	FALSE	canonical	3	31	junction_8	38.4837628097877	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4132	False	NA	33	True	AATAAA	-20	NA	4384068	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.17	chr19	-	6876	21	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	5	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.8039624265358	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4448308	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375103_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.18	chr19	-	5286	11	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-9118	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.146713410683	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	5158	False	NA	33	True	AATAAA	-20	NA	4393147	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376538_4376589_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874
ES.17120.2	chr19	-	176	2	Intergenic	novelGene_14259	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4451531	4360213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4360223_4451364
ES.17120.20	chr19	-	5325	11	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-40	26	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	54.5750858909081	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4213	False	NA	33	True	AATAAA	-20	NA	4383987	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4382468_4382514_4383670
ES.17120.21	chr19	-	6826	21	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	2	26	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	38.7459675321187	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4448311	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400334_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.23	chr19	-	6982	22	NNC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	-101	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	46.2770911034578	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAACTAACCCCT	NA	False	NA	22	True	AATAAA	-9	NA	4447224	4366182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374813_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4439030_4439086_4444819_4444921_4446338
ES.17120.24	chr19	-	6812	21	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	39	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	34.2138495349471	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAACTAACCCCT	NA	False	NA	22	True	AATAAA	-9	NA	4448274	4366182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444930_4447961
ES.17120.27	chr19	-	7157	20	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	3	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	42.5550970870546	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAACTAACCCCT	NA	False	NA	22	True	AATAAA	-9	NA	4447120	4366182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400334_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.29	chr19	-	5301	10	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.3604097935289	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAACTAACCCCT	4150	False	NA	22	True	AATAAA	-9	NA	4384050	4366182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374395_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.3	chr19	-	5356	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-23	37	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGGTGTATGTGTAT	4148	False	NA	44	True	AATAAA	-31	NA	4384052	4366160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.30	chr19	-	6543	20	NNC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	21	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.098673728603	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCTCCAATGGGAAATAT	NA	False	NA	-46	True	AATAAA	-25	NA	4448292	4366250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4448070
ES.17120.33	chr19	-	5253	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-23	-66	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAGAAATAGCCTC	4148	False	NA	-59	True	AATAAA	-12	NA	4384052	4366263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.35	chr19	-	6944	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	-68	366	-50	-366	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTAAAGGGTTTGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	4447173	4366563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.36	chr19	-	6736	9	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	-367	intron_retention	FALSE	canonical	3	31	junction_8	38.4837628097877	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTAAAGGGTTTGGTT	4150	False	NA	NA	False	AATAAA	-19	NA	4384050	4366564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.37	chr19	-	6866	21	NNC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	-4	-367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.1440174856089	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTAAAGGGTTTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	4447100	4366564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393262_4395541_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.38	chr19	-	4949	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	-368	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTAAAGGGTTTGGT	4150	False	NA	NA	False	AATAAA	-18	NA	4384050	4366565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.39	chr19	-	5803	21	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	462	-368	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	34.4927166224987	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTAAAGGGTTTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	4446483	4366565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374813_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.4	chr19	-	7260	21	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	1	26	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	34.9921062526965	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447122	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400334_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.40	chr19	-	6768	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-310	2120	-310	-369	multi-exon	FALSE	canonical	3	19	junction_20	31.2315545562497	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTAAAGGGTTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	4448623	4366566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.41	chr19	-	4983	11	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-11	-369	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	54.5750858909081	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTAAAGGGTTTGG	4160	False	NA	NA	False	AATAAA	-17	NA	4384040	4366566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4382468_4382514_4383670
ES.17120.42	chr19	-	5099	16	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	40177	984	5987	552	3prime_fragment	FALSE	canonical	3	88	junction_15	23.6402669659677	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAAGCTTCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	4406928	4367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775
ES.17120.43	chr19	-	5513	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-308	3373	-308	-86	multi-exon	FALSE	canonical	3	19	junction_20	31.2315545562497	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGAACTGTTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	4448621	4367819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.44	chr19	-	3246	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-21	-86	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	51.3225096814254	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGAACTGTTCTGGGT	4150	False	NA	NA	False	NA	NA	NA	4384050	4367819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374813_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.45	chr19	-	5617	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	3	1622	3	-86	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGAACTGTTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	4447102	4367819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.46	chr19	-	3677	10	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-3	-86	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGAACTGTTCTGGGT	4168	False	NA	NA	False	NA	NA	NA	4384032	4367819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.47	chr19	-	3614	11	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-7	-116	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	54.5750858909081	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAATGAA	4246	False	NA	NA	False	NA	NA	NA	4383954	4367849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4382468_4382514_4383670
ES.17120.48	chr19	-	192	1	Intergenic	novelGene_14262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAATAAAAA	9221	False	NA	NA	False	NA	NA	NA	4389084	4388892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4388900_4389100
ES.17120.49	chr19	-	5342	12	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	1	23639	1	1541	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAAGTTCTAAGTCTA	NA	False	NA	NA	False	NA	NA	NA	4447104	4389836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.5	chr19	-	7383	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	-115	-26	-97	26	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447220	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.50	chr19	-	4348	12	NNC	ENSMUSG00000054611.18	novel	2413	13	NA	NA	-143	1265	intron_retention	FALSE	canonical	2	7	junction_11	32.6534520975087	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAATAATTATCTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	4447266	4390112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447218
ES.17120.51	chr19	-	5073	12	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	-17	23926	1	1254	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTGTTTAACTTGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	4447122	4390123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.52	chr19	-	3804	12	ISM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	2	25176	2	4	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGCTTTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	4447103	4391373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.53	chr19	-	3392	12	ISM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-2	26928	-2	3	5prime_fragment	FALSE	canonical	3	19	junction_11	29.7515886095749	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTGGCTTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	4448315	4391374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.54	chr19	-	3208	12	ISM	ENSMUSG00000054611.18	ENSMUST00000116571.9	2413	13	7	590	4	-590	5prime_fragment	FALSE	canonical	3	58	junction_11	21.4707180955177	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGGATTGATTGGTG	NA	False	NA	NA	False	NA	NA	NA	4447101	4391967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.55	chr19	-	4002	11	NIC	ENSMUSG00000054611.18	novel	2413	13	NA	NA	-52	-590	intron_retention	FALSE	canonical	3	58	junction_10	21.6101827849743	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGGATTGATTGGTG	NA	False	NA	NA	False	NA	NA	NA	4447175	4391967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412943_4444819_4444921_4446338
ES.17120.56	chr19	-	4320	10	NIC	ENSMUSG00000054611.18	novel	2413	13	NA	NA	1	-593	intron_retention	FALSE	canonical	3	58	junction_9	18.9443629845104	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTGTGGATTGATTG	NA	False	NA	NA	False	NA	NA	NA	4447104	4391970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4412943_4444819_4444921_4446338
ES.17120.57	chr19	-	3102	12	ISM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-308	27524	-308	-593	5prime_fragment	FALSE	canonical	3	19	junction_11	29.7515886095749	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTGTGGATTGATTG	NA	False	NA	NA	False	NA	NA	NA	4448621	4391970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17120.58	chr19	-	178	1	Intergenic	novelGene_14264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	4408534	4408356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4408400_4408500
ES.17120.59	chr19	-	174	1	Intergenic	novelGene_14265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTTAGTTCA	NA	False	NA	NA	False	NA	NA	NA	4411160	4410986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4411000_4411200
ES.17120.6	chr19	-	7281	21	NNC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	2	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.9002437317632	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4447103	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400374_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ES.17120.60	chr19	-	5842	2	Intergenic	novelGene_14266	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCTCAATGAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	4420111	4413671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4415626_4416223
ES.17120.61	chr19	-	195	1	NIC	ENSMUSG00000054611.18	novel	1128	4	NA	NA	8313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	1820	False	NA	NA	False	NA	NA	NA	4438632	4438437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4438400_4438600
ES.17120.62	chr19	-	157	1	Intergenic	novelGene_14268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	4451531	4451374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4451400_4451500
ES.17120.7	chr19	-	9328	12	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	11126	26	intron_retention	FALSE	canonical	3	90	junction_11	23.5076917252191	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4401789	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764
ES.17120.8	chr19	-	8890	8	NIC	ENSMUSG00000054611.18	novel	8578	21	NA	NA	-20	26	intron_retention	FALSE	canonical	3	31	junction_7	40.2983769359694	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	4151	False	NA	33	True	AATAAA	-20	NA	4384049	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
ES.17120.9	chr19	-	7189	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	-336	1725	-336	26	multi-exon	FALSE	canonical	3	19	junction_20	31.2315545562497	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCTTTCATTTTTGG	NA	False	NA	33	True	AATAAA	-20	NA	4448649	4366171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ES.17121.1	chr19	-	4505	1	Intergenic	novelGene_14269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGACTTTTTAGAACCA	9786	False	NA	NA	False	NA	NA	NA	4467354	4462849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4462800_4467400
ES.17122.1	chr19	+	157	1	Intergenic	novelGene_14270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	4478228	4478385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4478200_4478400
ES.17123.1	chr19	+	483	1	Intergenic	novelGene_14272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4478418	4478901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4478400_4478900
ES.17123.2	chr19	+	178	1	Intergenic	novelGene_14271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCAGGCAA	NA	False	NA	NA	False	NA	NA	NA	4478418	4478596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4478400_4478600
ES.17124.1	chr19	-	2333	4	FSM	ENSMUSG00000041845.12	ENSMUST00000117462.2	1495	4	-18	-820	-7	612	multi-exon	FALSE	canonical	3	13	junction_1	2.62466929133727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCCAAAAAC	9141	False	NA	NA	False	NA	NA	NA	4489467	4474874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4476790_4482082_4482193_4482795_4482884_4489247
ES.17124.2	chr19	-	1112	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	24	208	-8	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9172	False	NA	-4	True	ACTAAA	-15	NA	4489436	4475694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ES.17124.3	chr19	-	1495	4	FSM	ENSMUSG00000041845.12	ENSMUST00000117462.2	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.62466929133727	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9159	False	NA	-4	True	ACTAAA	-15	NA	4489449	4475694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4476790_4482082_4482193_4482795_4482884_4489247
ES.17124.4	chr19	-	348	1	Intergenic	novelGene_14273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4481031	4480683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4480700_4481000
ES.17124.5	chr19	-	176	1	Intergenic	novelGene_14274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4481030	4480854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4480900_4481000
ES.17125.1	chr19	+	1831	5	FSM	ENSMUSG00000087132.9	ENSMUST00000133871.8	984	5	-56	-791	-56	1	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTGTTTGCCTGTAT	NA	False	NA	NA	False	AAAAAG	-12	NA	4489530	4499002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4489699_4493769_4493817_4494030_4494067_4497324_4497455_4497552
ES.17125.2	chr19	+	3704	1	NIC	ENSMUSG00000087132.9	novel	1402	5	NA	NA	740	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGGTTTGAGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	4494505	4498209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4494500_4498200
ES.17125.3	chr19	+	2238	2	FSM	ENSMUSG00000087132.9	ENSMUST00000136632.2	1422	2	-840	24	-840	-18	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAAAACCTTCAA	NA	False	NA	NA	False	NA	NA	NA	4496000	4498336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4497455_4497552
ES.17126.1	chr19	-	1899	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	285	1397	-6	412	multi-exon	FALSE	canonical	1	2	junction_3	1.55182578445717	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTCCTGTGGTGGCAA	NA	False	NA	NA	False	AATAAA	-10	NA	4527190	4497332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
ES.17126.2	chr19	-	208	1	Intergenic	novelGene_14275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	4500423	4500215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4500200_4500400
ES.17127.1	chr19	-	226	1	Intergenic	novelGene_14276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	4528772	4528546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4528500_4528800
ES.17128.1	chr19	+	4234	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	-149	-24	-135	5	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGACAGTGTGGGTG	1552	False	NA	34	True	NA	NA	NA	4560364	4671731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.10	chr19	+	4973	17	NIC	ENSMUSG00000024892.18	novel	4148	21	NA	NA	21	-3	intron_retention	FALSE	canonical	3	75	junction_8	9.32214265874536	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	1762	False	NA	7	True	AATAAA	-22	NA	4560574	4671704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4668083_4668169_4669227_4669347_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.11	chr19	+	182	1	Intergenic	novelGene_14277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4572732	4572914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4572700_4572900
ES.17128.12	chr19	+	3606	17	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	7862	22	7800	-3	3prime_fragment	FALSE	canonical	3	75	junction_4	11.8610114977602	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	NA	False	NA	7	True	AATAAA	-22	NA	4652235	4671704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.13	chr19	+	3290	15	NNC	ENSMUSG00000024892.18	novel	4044	20	NA	NA	7809	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.5074201492126	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTAGGTCATGTACAGT	NA	False	NA	6	True	AATAAA	-21	NA	4652244	4671703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4668240_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.14	chr19	+	4183	10	NIC	ENSMUSG00000024892.18	novel	4044	20	NA	NA	8653	-1	intron_retention	FALSE	canonical	3	75	junction_1	14.3690339202909	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGTCATGTACAGTCTA	NA	False	NA	9	True	AATAAA	-24	NA	4653088	4671706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4668083_4668169_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.15	chr19	+	4616	10	NNC	ENSMUSG00000024892.18	novel	4148	21	NA	NA	20457	-2	intron_retention	FALSE	canonical	0	0	junction_1	33.9247533357118	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTCATGTACAGTCT	NA	False	NA	8	True	AATAAA	-23	NA	4664892	4671705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4666514_4667607_4667753_4667992_4668083_4668169_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.2	chr19	+	3989	21	NNC	ENSMUSG00000024892.18	novel	595	5	NA	NA	-135	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.2514049260526	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	1552	False	NA	7	True	AATAAA	-22	NA	4560364	4671704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4560390_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667605_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.3	chr19	+	2280	3	FSM	ENSMUSG00000024892.18	ENSMUST00000223659.2	275	3	-30	-1975	10	1975	multi-exon	FALSE	canonical	0	0	junction_2	52	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTCTCACTTTTT	1711	False	NA	NA	False	TATAAA	-44	NA	4560523	4582931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4560610_4565681_4565719_4580774
ES.17128.5	chr19	+	4172	21	FSM	ENSMUSG00000024892.18	ENSMUST00000068004.13	4148	21	42	-66	-12	66	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTCTGTCTAGTGTT	1729	False	NA	NA	False	TTTAAA	-31	NA	4560541	4671846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.6	chr19	+	4082	22	NNC	ENSMUSG00000024892.18	novel	4148	21	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.9207570205079	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACACTAGGTCATGTAC	1732	False	NA	3	True	AATAAA	-18	NA	4560544	4671700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4560610_4565681_4565719_4594495_4594555_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17128.8	chr19	+	4420	21	FSM	ENSMUSG00000024892.18	ENSMUST00000068004.13	4148	21	66	-338	12	338	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACCATTCTTGAAG	1753	False	NA	NA	False	AAAAAG	-8	NA	4560565	4672118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ES.17129.1	chr19	-	3588	2	NIC	ENSMUSG00000045045.8	novel	2918	3	NA	NA	-151	2	intron_retention	FALSE	canonical	3	22	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTTTCGTCTCATC	NA	False	NA	2	True	AATAAA	-20	NA	4665846	4661810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4664543_4664990
ES.17129.2	chr19	-	3096	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	-177	-1	-177	1	multi-exon	FALSE	canonical	3	22	junction_2	18.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665872	4661811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4662667_4663183_4664543_4664990
ES.17129.3	chr19	-	3637	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	-435	-8	-270	1	multi-exon	FALSE	canonical	3	59	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665965	4661811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4662667_4663183
ES.17129.4	chr19	-	3509	2	NNC	ENSMUSG00000045045.8	novel	3194	2	NA	NA	-231	1	intron_retention	TRUE	canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	False	NA	1	True	AATAAA	-19	NA	4665926	4661811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4662667_4663272
ES.17129.5	chr19	-	3389	1	NIC	ENSMUSG00000045045.8	novel	2918	3	NA	NA	329	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	False	NA	0	True	AATAAA	-18	NA	4665201	4661812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4661800_4665200
ES.17129.6	chr19	-	2761	3	NNC	ENSMUSG00000045045.8	novel	3194	2	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCAGTGTTGGTTTTT	NA	False	NA	-7	True	AATAAA	-11	NA	4665593	4661819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4662667_4663183_4664056_4664551
ES.1713.1	chr1	-	1781	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTGTATATAA	NA	False	NA	NA	False	NA	NA	NA	159143106	159141325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_159141300_159143100
ES.17130.1	chr19	-	2006	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	12	-593	12	589	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGACATGTAGTCATT	NA	False	NA	NA	False	NA	NA	NA	4675656	4672029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ES.17130.10	chr19	-	1567	8	NNC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	122.96971586699	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675652	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4674882_4675125_4675220_4675324_4675460
ES.17130.12	chr19	-	1504	7	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	16	-1	intron_retention	FALSE	canonical	3	267	junction_4	43.2537731173696	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675652	4672623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675324_4675460
ES.17130.13	chr19	-	1426	8	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	121.7077463032	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGGTCTTGGAACCTT	NA	False	NA	-14	True	ATTAAA	-16	NA	4675657	4672623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673528_4673605_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ES.17130.14	chr19	-	1423	8	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	128.932983699728	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATGGTCTTGGAACCT	NA	False	NA	-15	True	ATTAAA	-15	NA	4675647	4672624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675121_4675220_4675324_4675460
ES.17130.15	chr19	-	1689	7	NNC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	11	-4	intron_retention	FALSE	canonical	1	1	junction_5	158.67095582438	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAACATGGTCTTGGAAC	NA	False	NA	-17	True	ATTAAA	-13	NA	4675657	4672626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4674882_4675324_4675460
ES.17130.3	chr19	-	1459	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	-12	-22	-11	18	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGTATTTGGGACTA	NA	False	NA	9	True	ATTAAA	-39	NA	4675680	4672600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ES.17130.4	chr19	-	2170	5	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	266	junction_4	46.2080891186814	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675657	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673528_4673592_4673853_4674792_4675040_4675125_4675220
ES.17130.6	chr19	-	1516	6	NIC	ENSMUSG00000024889.6	novel	999	7	NA	NA	4	0	intron_retention	TRUE	canonical	1	9	junction_1	159.106756613288	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675664	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675121_4675220
ES.17130.7	chr19	-	1374	7	NIC	ENSMUSG00000024889.6	novel	1425	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_1	127.165246824752	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675680	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ES.17130.8	chr19	-	1420	8	NNC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	18	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	159.899075312255	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675650	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4673271_4673528_4673584_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675121_4675220_4675324_4675460
ES.17130.9	chr19	-	1536	7	NIC	ENSMUSG00000024889.6	novel	1455	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	51	junction_4	117.366472592853	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675658	4672622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675324_4675460
ES.17131.1	chr19	-	193	1	Intergenic	novelGene_14278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAATCACTGCCAG	NA	False	NA	NA	False	NA	NA	NA	4698007	4697814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4697800_4698000
ES.17132.1	chr19	+	177	1	Intergenic	novelGene_14279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAGAACAATGTA	NA	False	NA	NA	False	NA	NA	NA	4706446	4706623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4706400_4706600
ES.17133.1	chr19	-	159	1	Intergenic	novelGene_14280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	4707301	4707142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4707100_4707300
ES.17134.1	chr19	-	284	1	Intergenic	novelGene_14281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGAAGTGAGGGTCAGGT	NA	False	NA	NA	False	NA	NA	NA	4759659	4759375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4759400_4759700
ES.17135.1	chr19	+	8201	37	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-450	1	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	10.212669147246	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTGTTGCTTTCCT	5111	False	NA	14	True	ATTAAA	-24	NA	4761961	4802389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4762341_4768846_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.10	chr19	+	4735	10	NIC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	3677	-10	intron_retention	FALSE	canonical	3	38	junction_9	3.74495545474505	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTGCCTCTGGGTGTT	NA	False	NA	3	True	ATTAAA	-13	NA	4795483	4802378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4795617_4795807_4797985_4798086_4798226_4798621_4799163_4799429_4799573_4799661_4799738_4799810_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.2	chr19	+	4655	19	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-383	-3679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.53825954048895	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGCAGGGGGGCCAG	5178	False	NA	NA	False	NA	NA	NA	4762028	4790427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4762341_4768846_4769026_4774107_4774260_4774657_4774739_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880
ES.17135.3	chr19	+	8100	36	NIC	ENSMUSG00000067889.8	novel	953	5	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	9.77443562753035	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTGTTGTTGCTTT	NA	False	NA	11	True	ATTAAA	-21	NA	4771100	4802386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.4	chr19	+	8356	36	NNC	ENSMUSG00000067889.8	novel	953	5	NA	NA	16	573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7287140945432	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGAGAGTATTTGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	4771122	4802961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4771264_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.5	chr19	+	6905	29	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	18133	11	8221	-11	3prime_fragment	FALSE	canonical	3	12	junction_3	9.21539306745812	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCACTGCCTCTGGGTGT	NA	False	NA	2	True	ATTAAA	-12	NA	4779327	4802377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.6	chr19	+	5115	23	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	26173	8	-4439	-8	3prime_fragment	FALSE	canonical	3	24	junction_5	6.62389862979886	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCCTCTGGGTGTTGT	NA	False	NA	5	True	ATTAAA	-15	NA	4787367	4802380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.7	chr19	+	5007	22	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	26612	8	-4000	-8	3prime_fragment	FALSE	canonical	3	24	junction_4	6.58728246315832	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCCTCTGGGTGTTGT	NA	False	NA	5	True	ATTAAA	-15	NA	4787806	4802380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.8	chr19	+	4662	22	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-3701	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	10.3387082795139	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTGCCTCTGGGTGTT	NA	False	NA	3	True	ATTAAA	-13	NA	4788105	4802378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800092_4800270_4800508_4800683_4801176_4801220_4801528
ES.17135.9	chr19	+	3783	18	ISM	ENSMUSG00000067889.8	ENSMUST00000008991.8	8299	37	31164	4	552	-4	3prime_fragment	FALSE	canonical	3	25	junction_2	5.91578733495276	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGGGTGTTGTTGCT	NA	False	NA	9	True	ATTAAA	-19	NA	4792358	4802384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ES.17136.1	chr19	+	3140	1	Genic_Genomic	ENSMUSG00000033760.18	novel	NA	NA	NA	NA	-393	-1458	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAATTTGCAACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	4806131	4809271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_4806100_4809300
ES.17136.10	chr19	+	2765	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-13	1442	9	-801	multi-exon	FALSE	canonical	3	81	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATATTCTGTGCATT	NA	False	NA	NA	False	GATAAA	-18	NA	4806579	4809928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273
ES.17136.11	chr19	+	5620	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-13	-1413	9	-121	multi-exon	FALSE	canonical	3	81	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTTTTGAGTATTTT	NA	False	NA	NA	False	AAAAAG	-7	NA	4806579	4812783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273
ES.17136.12	chr19	+	1324	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-17	476	-10	-3	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTATGTTTTCTTTCTTA	NA	False	NA	NA	False	AGTAAA	-17	NA	4806581	4815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ES.17136.13	chr19	+	1420	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	33	-10	5	10	multi-exon	FALSE	canonical	3	52	junction_2	14.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATACTTGGTATGAA	NA	False	NA	NA	False	AGTAAA	-21	NA	4806603	4812914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4812004
ES.17136.14	chr19	+	1893	2	NNC	ENSMUSG00000033760.18	novel	4194	2	NA	NA	19	-1486	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4806627	4809243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4806690_4807412
ES.17136.15	chr19	+	836	1	NIC	ENSMUSG00000033760.18	novel	1606	5	NA	NA	-74	-3035	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAACTGTTCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	4806858	4807694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4806900_4807700
ES.17136.2	chr19	+	4608	1	Genic_Genomic	ENSMUSG00000033760.18	novel	NA	NA	NA	NA	-392	11	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTTGTAGATATCTGG	NA	False	NA	NA	False	NA	NA	NA	4806132	4810740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_4806100_4810700
ES.17136.3	chr19	+	2119	5	FSM	ENSMUSG00000033760.18	ENSMUST00000236797.2	2110	5	-7	-2	6	-2	multi-exon	FALSE	canonical	0	0	junction_3	32.5192250830182	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTCTTAACTGAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	4806530	4815966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4810040_4810311_4812004_4812676_4815371
ES.17136.4	chr19	+	4511	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	-7	-3061	-7	1	multi-exon	FALSE	canonical	3	52	junction_2	14.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTCTTAACTGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	4806563	4815965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4812004
ES.17136.5	chr19	+	2440	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-19	1773	3	-1132	multi-exon	FALSE	canonical	3	81	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATCATTTATTAGT	NA	False	NA	NA	False	AATAAA	-9	NA	4806573	4809597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273
ES.17136.6	chr19	+	2114	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-19	2099	3	-1458	multi-exon	FALSE	canonical	3	81	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAATTTGCAACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	4806573	4809271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273
ES.17136.7	chr19	+	2743	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	5	-1305	5	51	multi-exon	FALSE	canonical	3	52	junction_2	14.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATAACTTTTTTCTCTC	NA	False	NA	NA	False	CATAAA	-5	NA	4806575	4814209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4812004
ES.17136.8	chr19	+	1855	2	FSM	ENSMUSG00000033760.18	ENSMUST00000182065.2	4194	2	-17	2356	5	-1715	multi-exon	FALSE	canonical	3	81	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCACGATTGCTTCTAC	NA	False	NA	NA	False	AATAAA	-31	NA	4806575	4809014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273
ES.17136.9	chr19	+	1804	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	-23	2	5	-2	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTCTTAACTGAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	4806575	4815966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ES.17137.1	chr19	+	169	1	Intergenic	novelGene_14282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTCA	7289	False	NA	NA	False	NA	NA	NA	4819139	4819308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4819100_4819300
ES.17138.1	chr19	+	1985	1	Intergenic	novelGene_14284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTATCAGGACTACCTA	NA	False	NA	NA	False	AAAAAG	-35	NA	4822128	4824113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4822100_4824100
ES.17139.1	chr19	+	1251	1	Intergenic	novelGene_14288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATTATTCTTTCTTC	5289	False	NA	NA	False	NA	NA	NA	4844734	4845985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4844700_4846000
ES.1714.1	chr1	-	158	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	159256525	159256367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_159256400_159256500
ES.17140.1	chr19	-	4165	3	NNC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	8167	32180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACAGTTGCATTGTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	4843863	4760760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4764339_4842425_4842849_4843699
ES.17140.10	chr19	-	3201	1	Intergenic	novelGene_14285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATTAATCACTTTTCA	1996	False	NA	NA	False	CATAAA	-18	NA	4826643	4823442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4823400_4826600
ES.17140.11	chr19	-	326	1	Intergenic	novelGene_14286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTGG	2287	False	NA	NA	False	AATAGA	-15	NA	4826352	4826026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4826000_4826400
ES.17140.12	chr19	-	4151	1	Intergenic	novelGene_14287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTGGTGTTACTGTGT	7821	False	NA	-1	True	NA	NA	NA	4831491	4827340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4827300_4831500
ES.17140.13	chr19	-	1880	4	NNC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	2	7838	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.6418242755334	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTTGGTGTTACTGTG	7798	False	NA	-2	True	NA	NA	NA	4861629	4827341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4828186_4842425_4842849_4843854_4844038_4861199
ES.17140.14	chr19	-	2259	5	NNC	ENSMUSG00000096370.9	novel	1434	3	NA	NA	-77	7836	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.7123753558724	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGGTTGGTGTTACTG	8110	False	NA	-4	True	NA	NA	NA	4861317	4827343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4828186_4837388_4838071_4842425_4842849_4843843_4844038_4861199
ES.17140.15	chr19	-	2557	5	NNC	ENSMUSG00000096370.9	novel	1434	3	NA	NA	4	7835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8463936303744	470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTGGTTGGTGTTACT	7800	False	NA	-5	True	NA	NA	NA	4861627	4827344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4828186_4837388_4838071_4842425_4842849_4843854_4844038_4861199
ES.17140.16	chr19	-	4513	7	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	157	35	multi-exon	FALSE	canonical	1	6	junction_4	153.55672133341	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCTCTGCTCTGTCTG	8044	False	NA	NA	False	NA	NA	NA	4861383	4834285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4851578_4851834_4852578_4854044_4861199
ES.17140.17	chr19	-	4938	4	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	2610	4	NA	NA	7593	0	intron_retention	FALSE	canonical	3	27	junction_3	29.4392028877595	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTCTTGGGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	4853947	4834320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4844038_4852578
ES.17140.18	chr19	-	4247	4	NNC	ENSMUSG00000094936.9	novel	2610	4	NA	NA	-1443	-2	intron_retention	FALSE	canonical	2	3	junction_1	40.4310112001501	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTTGTCTTGGGTG	NA	False	NA	NA	False	AATAAA	-11	NA	4845372	4834322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4834809_4835463_4835596_4837388_4838071_4842425
ES.17140.19	chr19	-	4795	4	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	35	junction_3	18.3726850393609	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTGCTTTGTCTTGGG	7796	False	NA	NA	False	AATAAA	-9	NA	4861631	4834324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4838071_4842425_4842849_4843843_4844038_4861199
ES.17140.2	chr19	-	6937	1	Genic_Genomic	ENSMUSG00000096370.9	novel	NA	NA	NA	NA	58166	6013	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGTCTCTATGAGTC	15	True	NA	NA	False	NA	NA	NA	4793864	4786927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_4786900_4793900
ES.17140.20	chr19	-	1531	4	NNC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	2	855	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.5622957508487	457	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTGCTTTGTCTTGGG	7798	False	NA	NA	False	AATAAA	-9	NA	4861629	4834324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4834809_4842425_4842849_4843843_4844038_4861199
ES.17140.21	chr19	-	1901	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	42	667	1	193	multi-exon	FALSE	canonical	3	26	junction_3	29.8923996285938	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAAGTAGGCATCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	4843887	4834987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ES.17140.22	chr19	-	1802	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	-50	858	-50	2	multi-exon	FALSE	canonical	3	26	junction_3	29.8923996285938	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGCTTTGAGAAAG	NA	False	NA	-2	True	AATAAA	-18	NA	4843979	4835178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ES.17140.23	chr19	-	3608	6	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	-14	1	multi-exon	FALSE	canonical	3	27	junction_4	135.241413775515	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTGCTTTGAGAAA	7800	False	NA	-3	True	AATAAA	-17	NA	4861627	4835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4852578_4854044_4861199
ES.17140.24	chr19	-	5436	2	ISM	ENSMUSG00000096370.9	ENSMUST00000179909.8	1435	3	19127	1	9621	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	-4	True	AATAAA	-16	NA	4842409	4835180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4835596_4837388
ES.17140.25	chr19	-	3253	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	-1689	-153	-1648	-1	multi-exon	FALSE	canonical	3	70	junction_3	11.4406682011537	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	NA	False	NA	-5	True	AATAAA	-15	NA	4845577	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
ES.17140.26	chr19	-	1894	5	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	160	-1	multi-exon	FALSE	canonical	3	35	junction_4	22.3760474615156	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	8047	False	NA	-5	True	AATAAA	-15	NA	4861380	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4861199
ES.17140.27	chr19	-	1623	5	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	2610	4	NA	NA	-8669	-1	multi-exon	FALSE	canonical	0	0	junction_3	38.622370460654	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	NA	False	NA	-5	True	AATAAA	-15	NA	4852598	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843953_4844038_4852578
ES.17140.28	chr19	-	3876	7	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	20	-1	multi-exon	FALSE	canonical	1	6	junction_4	153.55672133341	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	7785	False	NA	-5	True	AATAAA	-15	NA	4861642	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4851578_4851834_4852578_4854044_4861199
ES.17140.29	chr19	-	3034	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	-475	-153	-434	-1	intron_retention	FALSE	canonical	3	77	junction_2	10	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	NA	False	NA	-5	True	AATAAA	-15	NA	4844363	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4835596_4837388_4838071_4842425
ES.17140.3	chr19	-	2575	3	NIC	ENSMUSG00000096370.9	novel	2590	3	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_1	17	506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAATCACCCAGT	7791	False	NA	NA	False	NA	NA	NA	4861636	4792940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4794896_4843854_4844038_4861199
ES.17140.30	chr19	-	3565	8	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	317	-1	multi-exon	FALSE	canonical	1	1	junction_5	154.363075842876	457	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTGTGCTTTGAGA	8204	False	NA	-5	True	AATAAA	-15	NA	4861223	4835181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4850525_4850634_4851578_4851834_4852578_4854044_4861199
ES.17140.31	chr19	-	4113	9	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	413	-2	multi-exon	FALSE	canonical	1	2	junction_8	37.7458607002145	456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTATGTGTGCTTTGAG	8300	False	NA	-6	True	AATAAA	-14	NA	4861127	4835182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4851578_4851834_4851999_4852111_4852578_4854044_4858111_4858265_4860710
ES.17140.32	chr19	-	3851	7	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	2610	4	NA	NA	-16	-2	multi-exon	FALSE	canonical	1	4	junction_3	162.365842056347	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTATGTGTGCTTTGAG	7798	False	NA	-6	True	AATAAA	-14	NA	4861629	4835182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843854_4844038_4851578_4851834_4852578_4854044_4861199
ES.17140.33	chr19	-	4912	7	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	-14	1	multi-exon	FALSE	canonical	1	2	junction_4	154.269965392562	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTATGTGTGCTTTGA	7800	False	NA	-7	True	AATAAA	-13	NA	4861627	4835183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4850525_4851834_4852578_4854044_4861199
ES.17140.34	chr19	-	3323	7	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	376	-2	multi-exon	FALSE	non_canonical	0	0	junction_5	38.1375434738818	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGGTATGTGTGCTT	8263	False	NA	-10	True	AATAAA	-10	NA	4861164	4835186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843_4844038_4852578_4854052_4859972_4860077_4861126
ES.17140.35	chr19	-	5007	6	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	-16	-349	multi-exon	FALSE	canonical	0	0	junction_4	149.086552042765	456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTGTGAGATGTTC	7798	False	NA	NA	False	AATAAA	-22	NA	4861629	4835683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4838071_4842425_4842849_4843843_4844038_4850525_4850634_4852578_4854044_4861199
ES.17140.36	chr19	-	3428	4	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1411	4	NA	NA	-14	-353	multi-exon	FALSE	canonical	3	35	junction_3	18.3726850393609	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGATTTTGTGAGAT	7800	False	NA	NA	False	AATAAA	-18	NA	4861627	4835687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4838071_4842425_4842849_4843843_4844038_4861199
ES.17140.37	chr19	-	5436	4	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	4	1687	intron_retention	FALSE	canonical	3	27	junction_2	167.094783481312	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTCTTGTTACCTT	7800	False	NA	NA	False	NA	NA	NA	4861627	4839499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4852578_4854044_4861199
ES.17140.38	chr19	-	3969	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	4	1685	intron_retention	FALSE	canonical	3	35	junction_2	17.5	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTGACTCTTGTTACC	7800	False	NA	NA	False	NA	NA	NA	4861627	4839501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4861199
ES.17140.39	chr19	-	2575	4	NNC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	2	1684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.5773803324704	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACCTGACTCTTGTTAC	7798	False	NA	NA	False	NA	NA	NA	4861629	4839502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4840922_4842316_4842849_4843843_4844038_4861199
ES.17140.4	chr19	-	4212	1	Antisense	novelGene_ENSMUSG00000033760.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCTAGAATATCCTCC	2716	False	NA	NA	False	NA	NA	NA	4808888	4804676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_4804700_4808900
ES.17140.40	chr19	-	2972	2	FSM	ENSMUSG00000094936.9	ENSMUST00000179820.2	2965	2	4	-11	1	11	multi-exon	FALSE	canonical	3	26	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTGACTGATCTTTT	NA	False	NA	0	True	NA	NA	NA	4843907	4840084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4842849_4843699
ES.17140.41	chr19	-	4843	4	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	2	1092	intron_retention	FALSE	canonical	3	27	junction_2	167.094783481312	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGTTATTTACCTGA	7798	False	NA	-10	True	NA	NA	NA	4861629	4840094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4852578_4854044_4861199
ES.17140.42	chr19	-	3278	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	-6	1085	intron_retention	FALSE	canonical	0	0	junction_1	17.5	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTAAGTAATGTTATT	7781	False	NA	-17	True	NA	NA	NA	4861646	4840101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843953_4844038_4861199
ES.17140.43	chr19	-	3747	3	NIC	ENSMUSG00000094936.9	novel	1197	4	NA	NA	-3008	-13	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	33	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACTTTGTGTAAGTAA	NA	False	NA	-24	True	NA	NA	NA	4846937	4840108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4840339_4842425_4842849_4843843
ES.17140.44	chr19	-	1018	4	Fusion	ENSMUSG00000094936.9_ENSMUSG00000006456.11	novel	1197	4	NA	NA	8785	-19	multi-exon	FALSE	canonical	2	4	junction_1	27.3536509852382	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAAAACTTTGTGT	NA	False	NA	-30	True	NA	NA	NA	4852755	4840114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_4840339_4842425_4842849_4843843_4844038_4852578
ES.17140.45	chr19	-	3462	4	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	4	-287	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	167.094783481312	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGCATTTAAAAGACTGT	7800	False	NA	-6	True	ATTAAA	-15	NA	4861627	4841473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4852578_4854044_4861199
ES.17140.46	chr19	-	5332	1	NIC	ENSMUSG00000096370.9	novel	2590	3	NA	NA	5224	-288	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGGCATTTAAAAGACTG	NA	False	NA	-7	True	ATTAAA	-14	NA	4846806	4841474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4841500_4846800
ES.17140.47	chr19	-	2004	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	3	-290	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	17.5	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCGGCATTTAAAAGAC	7790	False	NA	-9	True	ATTAAA	-12	NA	4861637	4841476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4861199
ES.17140.48	chr19	-	972	3	NIC	ENSMUSG00000096370.9	novel	2432	3	NA	NA	-6	545	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	17.5	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGAATGATGGTCT	8181	False	NA	NA	False	AATAAA	-7	NA	4861246	4842117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4842849_4843843_4844038_4861199
ES.17140.49	chr19	-	8820	3	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	566	5854	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	170.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCCCGTTTTTTGT	8453	False	NA	-3	True	AATAAA	-19	NA	4860974	4844742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852578_4854044_4860710
ES.17140.5	chr19	-	6302	1	FSM	ENSMUSG00000103651.2	ENSMUST00000195512.2	3069	1	-610	-2623	-610	2623	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCAGTTCCCTGTTTCTT	NA	False	NA	84	True	NA	NA	NA	4815809	4809507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4809500_4815800
ES.17140.50	chr19	-	8977	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	35	-5847	-14	5847	multi-exon	FALSE	canonical	3	363	junction_1	19	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAATTGCTGTTCCCGT	7800	False	NA	-10	True	AATAAA	-12	NA	4861627	4844749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4851834_4852578_4854044_4861199
ES.17140.51	chr19	-	7258	3	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	8583	5830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACCAAACAAAATCA	NA	False	NA	-27	True	TTTAAA	-24	NA	4852957	4844766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4848600_4848787_4851834_4852578
ES.17140.52	chr19	-	9707	2	FSM	ENSMUSG00000006456.11	ENSMUST00000113793.4	3508	2	-16	-6183	-16	5830	multi-exon	FALSE	canonical	3	401	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACCAAACAAAATCA	7798	False	NA	-27	True	TTTAAA	-24	NA	4861629	4844766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4854044_4861199
ES.17140.53	chr19	-	3162	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	4	-1	4	1	multi-exon	FALSE	canonical	3	363	junction_1	19	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGATGGTTCTGGCTG	7769	False	NA	NA	False	AATAAA	-18	NA	4861658	4850595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4851834_4852578_4854044_4861199
ES.17140.54	chr19	-	2831	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	-19	353	-19	0	multi-exon	FALSE	canonical	3	363	junction_1	19	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7746	False	NA	0	True	AATAAA	-27	NA	4861681	4850949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4851834_4852578_4854044_4861199
ES.17140.55	chr19	-	4806	1	NIC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	5785	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	8286	False	NA	0	True	AATAAA	-27	NA	4855755	4850949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4850900_4855800
ES.17140.56	chr19	-	3541	2	FSM	ENSMUSG00000006456.11	ENSMUST00000113793.4	3508	2	-33	0	16	0	multi-exon	FALSE	canonical	3	401	junction_1	0	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7781	False	NA	0	True	AATAAA	-27	NA	4861646	4850949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4854044_4861199
ES.17140.57	chr19	-	2856	4	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	420	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.265734538591	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	8307	False	NA	0	True	AATAAA	-27	NA	4861120	4850949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852578_4854044_4858111_4858209_4860710
ES.17140.58	chr19	-	2761	3	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	418	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	170.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	8305	False	NA	0	True	AATAAA	-27	NA	4861122	4850949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852578_4854044_4860710
ES.17140.59	chr19	-	2917	3	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGGTTGTCATTGTCT	7791	False	NA	-3	True	AATAAA	-24	NA	4861636	4850952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852444_4854044_4861199
ES.17140.6	chr19	-	3370	1	FSM	ENSMUSG00000103651.2	ENSMUST00000195512.2	3069	1	429	-730	429	730	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCGTTTTTTAGGAACT	NA	False	NA	NA	False	AATAAA	-11	NA	4814770	4811400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4811400_4814800
ES.17140.60	chr19	-	2930	4	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	169.022680923794	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGGTTGTCATTGTCT	7797	False	NA	-3	True	AATAAA	-24	NA	4861630	4850952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852578_4854044_4858111_4858265_4861199
ES.17140.62	chr19	-	2860	4	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	467	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	168.780593934519	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACCTGGTTGTCATTGT	8354	False	NA	-5	True	AATAAA	-22	NA	4861073	4850954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852578_4854044_4858111_4858265_4860710
ES.17140.63	chr19	-	2919	3	NNC	ENSMUSG00000006456.11	novel	3165	3	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACCTGGTTGTCATTGT	7800	False	NA	-5	True	AATAAA	-22	NA	4861627	4850954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4851834_4852444_4854057_4861199
ES.17140.7	chr19	-	4354	1	FSM	ENSMUSG00000103651.2	ENSMUST00000195512.2	3069	1	-1080	-205	-1080	205	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGCTCCTGGGCCCCTTC	NA	False	NA	NA	False	AATAAA	-25	NA	4816279	4811925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4811900_4816300
ES.17140.8	chr19	-	2286	1	FSM	ENSMUSG00000103651.2	ENSMUST00000195512.2	3069	1	-956	1739	-956	-1739	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTCTGGATATCTCCA	NA	False	NA	NA	False	AGTAAA	-11	NA	4816155	4813869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4813900_4816200
ES.17140.9	chr19	-	4006	1	Intergenic	novelGene_14283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTCTTTTTTCTTTT	3402	False	NA	-4	True	AATAAA	-16	NA	4825237	4821231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4821200_4825200
ES.17141.1	chr19	+	156	1	Intergenic	novelGene_14289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATCTTTTA	3272	False	NA	NA	False	NA	NA	NA	4862687	4862843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4862700_4862800
ES.17142.1	chr19	+	177	1	Intergenic	novelGene_14290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGGAAGGA	6579	False	NA	NA	False	NA	NA	NA	4865994	4866171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4866000_4866200
ES.17143.1	chr19	+	179	1	Intergenic	novelGene_14291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAGGCAAACCTG	1580	False	NA	NA	False	NA	NA	NA	4870986	4871165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4871000_4871200
ES.17144.1	chr19	-	2210	2	NIC	ENSMUSG00000034108.7	novel	840	7	NA	NA	5867	1034	intron_retention	FALSE	canonical	3	586	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTGTTTTTTGAGTT	NA	False	NA	NA	False	AATAAA	-30	NA	4883380	4874359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4876050_4882860
ES.17144.10	chr19	-	979	7	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	-21	-3	combination_of_known_splicesites	FALSE	canonical	1	11	junction_3	217.241545034298	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTGTGTCTCTGTGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	4889336	4875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ES.17144.11	chr19	-	890	7	NNC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.914147563622	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTGTGTCTCTGTGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	4889333	4875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4875650_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ES.17144.13	chr19	-	3185	4	NNC	ENSMUSG00000034108.7	novel	540	3	NA	NA	-2684	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	281.64319428825	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCATTCTGTGTCTCT	207	False	NA	-15	True	ATTAAA	-12	NA	4879021	4875401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4875693_4875797_4875902_4875971_4878033_4878292
ES.17144.14	chr19	-	6711	1	NIC	ENSMUSG00000034108.7	novel	984	8	NA	NA	6201	-713	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	4883046	4876335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4876300_4883000
ES.17144.2	chr19	-	1292	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	-226	1	-226	-1	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889586	4875394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ES.17144.5	chr19	-	932	8	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	206.828727330078	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889297	4875394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884200_4884339_4888858_4888932_4889224
ES.17144.6	chr19	-	1100	7	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	527	junction_4	32.5729949498047	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889324	4875394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4875693_4875797_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ES.17144.7	chr19	-	984	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	-1	1	-1	-1	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889299	4875394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
ES.17144.8	chr19	-	1009	8	NNC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	207.066488385361	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTCTCTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-19	NA	4889297	4875394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888852_4888932_4889224
ES.17144.9	chr19	-	859	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236178.2	870	8	8	3	5	-3	multi-exon	FALSE	canonical	3	24	junction_5	202.991002112841	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTGTGTCTCTGTGTT	NA	False	NA	-10	True	ATTAAA	-17	NA	4889293	4875396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884267_4884339_4888858_4888932_4889224
ES.17145.1	chr19	+	177	2	Intergenic	novelGene_14292	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	594	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAGGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4898968	5019912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4899094_5019860
ES.17145.10	chr19	+	2046	13	NIC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_4	30.6869271840632	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTGGTGTAAGTG	NA	False	NA	3	True	AATAAA	-14	NA	4905230	4910939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906472_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.11	chr19	+	4730	5	NIC	ENSMUSG00000083282.4	novel	2093	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	96	junction_2	8.67467578644874	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTGGTGTAAGTG	NA	False	NA	3	True	AATAAA	-14	NA	4905235	4910939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4908361_4908443_4908701_4909430_4909551_4909629_4910337_4910418
ES.17145.12	chr19	+	1886	14	NNC	ENSMUSG00000083282.4	novel	2093	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.4328130566681	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTGGTGTAAGTG	NA	False	NA	3	True	AATAAA	-14	NA	4905243	4910939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4905494_4905703_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908621_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.13	chr19	+	2318	10	NIC	ENSMUSG00000083282.4	novel	2093	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	96	junction_5	6.67406996341387	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTGGTGTAAGTG	NA	False	NA	3	True	AATAAA	-14	NA	4905277	4910939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.14	chr19	+	5378	3	NIC	ENSMUSG00000083282.4	novel	2093	13	NA	NA	95	-1	intron_retention	FALSE	canonical	3	101	junction_2	8	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTGGTGTAAGT	NA	False	NA	2	True	AATAAA	-13	NA	4905375	4910938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4908112_4908214_4910337_4910418
ES.17145.15	chr19	+	2799	7	NIC	ENSMUSG00000083282.4	novel	2093	13	NA	NA	380	-1	intron_retention	FALSE	canonical	3	86	junction_2	10.770329614269	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTGGTGTAAGT	NA	False	NA	2	True	AATAAA	-13	NA	4906653	4910938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4908112_4908214_4908541_4908619_4908701_4909430_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.16	chr19	+	3640	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1088	-1613	7	0	multi-exon	TRUE	canonical	3	165	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	20	True	NA	NA	NA	4928706	4935423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4930427_4933503
ES.17145.17	chr19	+	2546	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	14	-2	-4	2	multi-exon	FALSE	canonical	3	97	junction_1	34	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTTTGTTTGTTTGT	NA	False	NA	24	True	NA	NA	NA	4928713	4935427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4929058_4930148_4930427_4933503
ES.17145.18	chr19	+	1649	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	23	886	5	712	multi-exon	FALSE	canonical	3	97	junction_1	34	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATTGTAAAGAGAATT	NA	False	NA	10	True	AATAAA	-19	NA	4928722	4934539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4929058_4930148_4930427_4933503
ES.17145.19	chr19	+	2305	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	9	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	74.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	20	True	NA	NA	NA	4928726	4935423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4928834_4930148_4930427_4933503
ES.17145.2	chr19	+	157	1	Intergenic	novelGene_14293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	4898969	4899126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4899000_4899100
ES.17145.20	chr19	+	2729	2	FSM	ENSMUSG00000006463.14	ENSMUST00000162754.2	939	2	-1063	-727	0	710	multi-exon	FALSE	canonical	3	165	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATTATTGTAAAGAGAA	NA	False	NA	8	True	AATAAA	-17	NA	4928731	4934537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4930427_4933503
ES.17145.21	chr19	+	2228	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162088.8	2269	3	36	5	0	-3	multi-exon	FALSE	canonical	2	7	junction_1	79	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCATGTCTTTTTGTT	NA	False	NA	17	True	NA	NA	NA	4928731	4935420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4928765_4930148_4930427_4933503
ES.17145.22	chr19	+	1152	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	33	1373	1	225	multi-exon	FALSE	canonical	3	97	junction_1	34	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCCTCCATCTTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	4928732	4934052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4929058_4930148_4930427_4933503
ES.17145.23	chr19	+	1412	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	15	887	1	709	multi-exon	FALSE	canonical	3	16	junction_1	74.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTATTGTAAAGAGA	NA	False	NA	7	True	AATAAA	-16	NA	4928732	4934536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4928834_4930148_4930427_4933503
ES.17145.24	chr19	+	2645	4	NNC	ENSMUSG00000006463.14	novel	2558	3	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.7262385167301	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCATGTCTTTTTGTT	NA	False	NA	17	True	NA	NA	NA	4928741	4935420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4929058_4930148_4930427_4932793_4932928_4933503
ES.17145.25	chr19	+	2634	3	NNC	ENSMUSG00000006463.14	novel	2558	3	NA	NA	-9	710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATTATTGTAAAGAGAA	NA	False	NA	8	True	AATAAA	-17	NA	4928741	4934537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4930064_4930148_4930427_4933503
ES.17145.26	chr19	+	2261	3	NNC	ENSMUSG00000006463.14	novel	2314	3	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGATCATGTCTTTTTG	NA	False	NA	15	True	NA	NA	NA	4928742	4935418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4928834_4930148_4930404_4933503
ES.17145.27	chr19	+	5628	1	NIC	ENSMUSG00000006463.14	novel	2269	3	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	20	True	NA	NA	NA	4929795	4935423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4929800_4935400
ES.17145.28	chr19	+	217	1	Intergenic	novelGene_14297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAGAAACCATCTAAAATA	NA	False	NA	NA	False	NA	NA	NA	4975021	4975238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4975000_4975200
ES.17145.29	chr19	+	177	2	Intergenic	novelGene_14298	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4975022	5127733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4975148_5127681
ES.17145.3	chr19	+	2007	14	NIC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	27.6749945879631	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGTGTAAGTGCTTA	NA	False	NA	7	True	AATAAA	-18	NA	4905139	4910943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4905515_4905725_4905837_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.30	chr19	+	176	2	Intergenic	novelGene_14300	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGTGGAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	4975023	5065235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4975148_5065183
ES.17145.31	chr19	+	176	2	Intergenic	novelGene_14299	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAGGGGAAT	NA	False	NA	NA	False	NA	NA	NA	4975023	5019912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_4975148_5019860
ES.17145.32	chr19	+	1008	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	-9	2046	-9	9	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTCTCCTGAGACCCC	3534	False	NA	19	True	AATAAA	-22	NA	5012165	5014981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ES.17145.34	chr19	+	1026	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	168	1851	-15	204	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTGCTGGAGTATG	3711	False	NA	NA	False	NA	NA	NA	5012342	5015176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ES.17145.35	chr19	+	2272	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	174	599	-9	-599	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAACTTGCTGGTTT	3717	False	NA	NA	False	NA	NA	NA	5012348	5016428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ES.17145.36	chr19	+	2876	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	174	-5	-9	5	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGGTATATGTCTTTA	3717	False	NA	NA	False	ATTAAA	-27	NA	5012348	5017032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ES.17145.37	chr19	+	839	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	-24	-2	-6	2	multi-exon	FALSE	canonical	2	9	junction_4	253.71871728353	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTCAGCTTCTCTCCTG	3720	False	NA	12	True	AATAAA	-15	NA	5012351	5014974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ES.17145.38	chr19	+	176	1	Intergenic	novelGene_14303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGTGGAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	5065059	5065235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5065100_5065200
ES.17145.39	chr19	+	2977	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	-360	2	-360	1	multi-exon	FALSE	canonical	3	72	junction_1	10.4311992290135	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGGAGTGTTCACTT	3698	False	NA	19	True	ATTAAA	-20	NA	5073527	5081998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ES.17145.4	chr19	+	1946	14	NNC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5474745864663	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGTGTAAGTGC	NA	False	NA	4	True	AATAAA	-15	NA	4905164	4910940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4905494_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.40	chr19	+	2781	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-326	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	26.9770272639518	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	3732	False	NA	18	True	ATTAAA	-19	NA	5073561	5081997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ES.17145.42	chr19	+	3541	9	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	3	junction_2	28.3634337660305	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4271	False	NA	13	True	ATTAAA	-14	NA	5074100	5081992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436
ES.17145.43	chr19	+	2326	12	NNC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	30.5078231397665	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGACGGATTCCTGGAGTG	4298	False	NA	12	True	ATTAAA	-13	NA	5074127	5081991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079279_5079349_5079436_5079523_5080315_5080519_5081033
ES.17145.44	chr19	+	3113	11	NNC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-3	0	intron_retention	FALSE	canonical	2	11	junction_8	24.8467301671669	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4309	False	NA	13	True	ATTAAA	-14	NA	5074138	5081992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079279_5079349_5079436_5080519_5081029
ES.17145.45	chr19	+	2154	11	NNC	ENSMUSG00000024891.7	novel	2401	12	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.1448626850311	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4325	False	NA	18	True	ATTAAA	-19	NA	5074154	5081997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079269_5079349_5079436_5079523_5080319_5080519_5081029
ES.17145.46	chr19	+	2333	12	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	26.6569886019091	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGACGGATTCCTGGAGTG	4326	False	NA	12	True	ATTAAA	-13	NA	5074155	5081991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5074306_5074538_5074621_5076064_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ES.17145.47	chr19	+	2873	9	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	3	junction_2	28.5733704697223	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4329	False	NA	13	True	ATTAAA	-14	NA	5074158	5081992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5074306_5074538_5074621_5076385_5076526_5077052_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315
ES.17145.48	chr19	+	3821	10	NNC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	17	-2	intron_retention	FALSE	canonical	1	1	junction_2	27.6624271629084	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTCCTGGAGTGTTCA	4329	False	NA	16	True	ATTAAA	-17	NA	5074158	5081995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5074306_5074538_5074795_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436
ES.17145.49	chr19	+	2201	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4333	False	NA	13	True	ATTAAA	-14	NA	5074162	5081992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ES.17145.5	chr19	+	1964	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	11	5	11	2	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTGGTGTAAGTGCT	NA	False	NA	5	True	AATAAA	-16	NA	4905168	4910941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.50	chr19	+	3729	5	NIC	ENSMUSG00000024891.7	novel	2401	12	NA	NA	421	0	intron_retention	FALSE	canonical	3	79	junction_3	8.40758586040012	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	6796	False	NA	18	True	ATTAAA	-19	NA	5076625	5081997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436
ES.17145.51	chr19	+	2053	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	-20	-1	-20	1	multi-exon	FALSE	canonical	3	75	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCTCTGTTACTCTCC	182	False	NA	10	True	AATAAA	-17	NA	5088833	5091160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5090061_5090334
ES.17145.52	chr19	+	1829	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	29	174	29	-173	multi-exon	FALSE	canonical	3	75	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGTAGTGCTAAGAACG	231	False	NA	NA	False	AATAAA	-32	NA	5088882	5090985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5090061_5090334
ES.17145.53	chr19	+	1656	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	40	336	40	-335	multi-exon	FALSE	canonical	3	75	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTGAAGTATTATTA	242	False	NA	NA	False	NA	NA	NA	5088893	5090823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5090061_5090334
ES.17145.54	chr19	+	7927	10	NNC	ENSMUSG00000117789.2	novel	3572	11	NA	NA	-16	3	intron_retention	FALSE	canonical	0	0	junction_1	78.0469943901322	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGCTGATGTGTGGC	251	False	NA	6	True	AATAAA	-17	NA	5088902	5099943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5090061_5090400_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.55	chr19	+	3854	10	FSM	ENSMUSG00000047379.8_ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	-2467	1	-20	-1	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGCTGATGTGTGGCT	263	False	NA	7	True	AATAAA	-18	NA	5088914	5099944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.56	chr19	+	1755	9	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	1	6	1	-6	intron_retention	FALSE	canonical	3	224	junction_4	16.6691144035909	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2731	False	NA	2	True	AATAAA	-13	NA	5091382	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020
ES.17145.57	chr19	+	1881	10	NNC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	10	-6	intron_retention	FALSE	canonical	1	1	junction_6	97.9169464141	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2740	False	NA	2	True	AATAAA	-13	NA	5091391	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097226_5097317_5097419_5097513_5098536_5099061_5099434
ES.17145.58	chr19	+	1366	10	NNC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.9032321553279	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACCTTGGTGTGGCTGA	2740	False	NA	-2	True	AATAAA	-9	NA	5091391	5099935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5091519_5095920_5096067_5096165_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.59	chr19	+	1852	9	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	10	-6	intron_retention	FALSE	canonical	3	224	junction_4	16.4848415218345	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2740	False	NA	2	True	AATAAA	-13	NA	5091391	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.6	chr19	+	1818	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	33	129	1	20	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTCTGTCTTTTTGC	NA	False	NA	NA	False	CATAAA	-16	NA	4905190	4910817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.60	chr19	+	1515	11	NNC	ENSMUSG00000117789.2	novel	3572	11	NA	NA	2473	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	94.2064222863813	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2740	False	NA	2	True	AATAAA	-13	NA	5091391	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097173_5097317_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.61	chr19	+	6912	17	Fusion	ENSMUSG00000024883.9_ENSMUSG00000117789.2	novel	3572	11	NA	NA	2473	5	intron_retention	FALSE	canonical	2	2	junction_9	110.192427569911	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGATAACTAGAAATAAG	2740	False	NA	9	True	NA	NA	NA	5091391	5107104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5100900_5101228_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.62	chr19	+	3914	10	NNC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.0469943901322	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2742	False	NA	2	True	AATAAA	-13	NA	5091393	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5094063_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.63	chr19	+	2223	8	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	13	-6	intron_retention	FALSE	canonical	3	224	junction_4	17.2437507165788	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	2743	False	NA	2	True	AATAAA	-13	NA	5091394	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5097513_5098536_5098602_5099020
ES.17145.64	chr19	+	1310	10	NNC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	75.2255866636405	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTTGGTGTGGCTGAT	2772	False	NA	-1	True	AATAAA	-10	NA	5091423	5099936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098563_5098602_5099020_5099061_5099434
ES.17145.65	chr19	+	1463	10	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	76.2029454082248	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGGCTGATGTGTG	2772	False	NA	4	True	AATAAA	-15	NA	5091423	5099941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5091640_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ES.17145.66	chr19	+	5052	3	NIC	ENSMUSG00000080268.5	novel	787	6	NA	NA	1690	906	intron_retention	FALSE	canonical	3	224	junction_2	9.5	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACCACCTCCACAGTC	4470	False	NA	NA	False	NA	NA	NA	5093121	5098398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5096067_5096163_5096550_5096677
ES.17145.67	chr19	+	1937	8	NNC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	-192	-6	intron_retention	FALSE	canonical	0	0	junction_5	84.1417656975053	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	7305	False	NA	2	True	AATAAA	-13	NA	5095956	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5096067_5096163_5096255_5096421_5096550_5096677_5096940_5097419_5098156_5098536_5098602_5099020_5099061_5099434
ES.17145.68	chr19	+	1451	2	ISM	ENSMUSG00000080268.5	ENSMUST00000237117.2	826	8	1316	-288	1316	-6	intron_retention	FALSE	canonical	3	281	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	8813	False	NA	2	True	AATAAA	-13	NA	5097464	5099939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5097513_5098536
ES.17145.69	chr19	+	4390	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	78	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	8.35330939076111	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCTTGATAACTAGAAAT	NA	False	NA	6	True	NA	NA	NA	5100586	5107101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.7	chr19	+	3912	8	NIC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	-5	20	intron_retention	FALSE	canonical	3	96	junction_3	7.17990392750232	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTCTGTCTTTTTGC	NA	False	NA	NA	False	CATAAA	-16	NA	4905208	4910817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_4905515_4905725_4908112_4908214_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ES.17145.70	chr19	+	4606	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	78	5	intron_retention	FALSE	canonical	3	10	junction_1	7.56534037568701	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGATAACTAGAAATAAG	NA	False	NA	9	True	NA	NA	NA	5100586	5107104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.71	chr19	+	5478	8	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	82	1	intron_retention	FALSE	canonical	2	2	junction_1	11.0767268428458	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCTTGATAACTAGAAA	NA	False	NA	5	True	NA	NA	NA	5100590	5107100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101112_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5103304_5103626_5103759_5103883
ES.17145.72	chr19	+	4259	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	83	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	9.88826464946088	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTTGATAACTAGAAATA	NA	False	NA	7	True	NA	NA	NA	5100591	5107102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101228_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.73	chr19	+	5164	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	83	0	intron_retention	FALSE	canonical	2	8	junction_1	8.83795083715677	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100591	5107099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883
ES.17145.74	chr19	+	4458	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	-269	-5	83	5	multi-exon	FALSE	canonical	3	10	junction_1	7.87557562074193	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGATAACTAGAAATAAG	NA	False	NA	9	True	NA	NA	NA	5100591	5107104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.75	chr19	+	5382	8	NIC	ENSMUSG00000024883.9	novel	4503	10	NA	NA	86	1	intron_retention	FALSE	canonical	1	3	junction_4	12.3453701145533	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCTTGATAACTAGAAA	NA	False	NA	5	True	NA	NA	NA	5100594	5107100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101801_5101861_5102003_5103304_5103626_5103759_5103883
ES.17145.76	chr19	+	4283	9	NIC	ENSMUSG00000024883.9	novel	4503	10	NA	NA	87	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.6377618123074	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGAAGCTTGATAACT	NA	False	NA	0	True	NA	NA	NA	5100595	5107095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.77	chr19	+	5555	7	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	87	-1	intron_retention	FALSE	canonical	2	8	junction_1	9.05538513813742	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100595	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5103304_5103626_5103759_5103883
ES.17145.78	chr19	+	5098	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	91	-1	intron_retention	FALSE	canonical	2	3	junction_1	10.1734949746879	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100599	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101228_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883
ES.17145.79	chr19	+	4572	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	99	3	intron_retention	FALSE	canonical	3	23	junction_2	5.58877222652704	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTTGATAACTAGAAATA	NA	False	NA	7	True	NA	NA	NA	5100607	5107102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.80	chr19	+	4406	10	FSM	ENSMUSG00000024883.9	ENSMUST00000225427.2	4503	10	102	-5	102	5	multi-exon	FALSE	canonical	1	3	junction_4	10.8320512061813	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGATAACTAGAAATAAG	NA	False	NA	9	True	NA	NA	NA	5100610	5107104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101801_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.81	chr19	+	5376	8	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	125	1	intron_retention	FALSE	canonical	2	8	junction_1	9.37647947509825	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCTTGATAACTAGAAA	NA	False	NA	5	True	NA	NA	NA	5100633	5107100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5103304_5103626_5103759_5103883
ES.17145.82	chr19	+	4982	9	ISM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	-18	1	1	-1	intron_retention	FALSE	canonical	3	10	junction_1	8.3357288223646	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100842	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883
ES.17145.83	chr19	+	4075	9	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.4901584497737	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100842	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101112_5101283_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.84	chr19	+	5228	8	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	10	junction_1	8.84792146697258	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100849	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5103304_5103626_5103759_5103883
ES.17145.85	chr19	+	4051	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	9.62378740156999	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGCTTGATAACTAGA	NA	False	NA	3	True	NA	NA	NA	5100865	5107098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5100970_5101228_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ES.17145.86	chr19	+	2537	1	FSM	ENSMUSG00000056481.8	ENSMUST00000070630.8	2605	1	30	38	30	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCCCACTGATGCCTG	6808	False	NA	NA	False	AATAAA	-27	NA	5118135	5120672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5118100_5120700
ES.17145.87	chr19	+	172	1	Intergenic	novelGene_14305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCCAAAAACATCA	NA	False	NA	NA	False	NA	NA	NA	5127100	5127272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5127100_5127300
ES.17145.88	chr19	+	172	1	Intergenic	novelGene_14306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5127561	5127733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5127600_5127700
ES.17145.9	chr19	+	1884	14	NNC	ENSMUSG00000083282.4	novel	1980	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	28.5613634004041	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTGGTGTAAGTG	NA	False	NA	3	True	AATAAA	-14	NA	4905230	4910939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909861_4910277_4910337_4910418
ES.17146.1	chr19	-	250	1	Intergenic	novelGene_14294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACTTCTATGGGAGA	2742	False	NA	NA	False	NA	NA	NA	4903873	4903623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4903600_4903900
ES.17147.1	chr19	-	2860	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	23	4	23	3	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTTGTTTTTGT	336	False	NA	0	True	AATAAA	-26	NA	4927914	4911247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
ES.17147.10	chr19	-	5614	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	-12	0	-12	0	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTGTGTGTG	5061	False	NA	NA	False	ATTAAA	-18	NA	4956668	4936905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.11	chr19	-	4563	7	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5.32290647422377	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	4947562	4936905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947465
ES.17147.12	chr19	-	7750	16	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	4	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	4.99332888295307	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTTATTTTGTGTG	5087	False	NA	NA	False	ATTAAA	-16	NA	4956642	4936907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945609_4945790_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.13	chr19	-	5704	18	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.63847386650436	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTTATTTTGTGTG	5076	False	NA	NA	False	ATTAAA	-16	NA	4956653	4936907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4954140_4954248_4956012_4956048_4956169_4956247_4956583
ES.17147.14	chr19	-	4666	8	NIC	ENSMUSG00000006464.10	novel	1549	13	NA	NA	-1526	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	4.97750039719553	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTATTTTATTTTGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	4949271	4936908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4949227
ES.17147.15	chr19	-	5112	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	8	482	0	-482	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGACATTCCATAAGTT	5081	False	NA	NA	False	NA	NA	NA	4956648	4937387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.16	chr19	-	4390	17	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	-1	-1199	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	4.77583435118933	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCTATCTCAGTTCATT	5082	False	NA	NA	False	AATATA	-16	NA	4956647	4938104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950647_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.17	chr19	-	7995	15	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	4	-1299	intron_retention	FALSE	non_canonical	0	0	junction_6	4.94252682628748	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTTTGAACTTTTAG	5087	False	NA	NA	False	AGTAAA	-16	NA	4956642	4938204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945609_4945790_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.18	chr19	-	6351	17	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	7	-1300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4.83476990145343	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATTTTTGAACTTTTA	5090	False	NA	NA	False	AGTAAA	-15	NA	4956639	4938205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945609_4945790_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.19	chr19	-	3436	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	20	2146	10	1459	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCATAGCTACTCATGA	5093	False	NA	NA	False	NA	NA	NA	4956636	4939051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.20	chr19	-	3315	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	6	2281	-2	1324	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGTTGAGCCCTTGTC	5079	False	NA	NA	False	AGTAAA	-15	NA	4956650	4939186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.21	chr19	-	1909	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	6	3687	-2	67	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCCTGTTCTTCTCTGA	5079	False	NA	NA	False	NA	NA	NA	4956650	4940592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.22	chr19	-	1227	9	FSM	ENSMUSG00000006464.10	ENSMUST00000235498.2	1244	9	19	-2	19	2	multi-exon	FALSE	canonical	2	10	junction_2	3.11247489949718	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAGCTAAATTATTTTA	5102	False	NA	NA	False	NA	NA	NA	4956627	4948827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.23	chr19	-	1077	9	FSM	ENSMUSG00000006464.10	ENSMUST00000235498.2	1244	9	7	160	7	-160	multi-exon	FALSE	canonical	2	10	junction_2	3.11247489949718	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTGTTTGTTTGTTTG	5090	False	NA	NA	False	NA	NA	NA	4956639	4948989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.25	chr19	-	2678	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	7	-2	7	2	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTATGTTTCTTTCT	NA	False	NA	-3	True	AATAAA	-19	NA	4978308	4957254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.26	chr19	-	2568	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	208.971551592555	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978275	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.27	chr19	-	2662	16	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_11	215.750308355644	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978279	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.28	chr19	-	4717	16	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	17	junction_2	206.295537733827	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978274	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963899_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.29	chr19	-	8568	15	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	495	junction_14	88.2689535638964	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978279	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4963981_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.30	chr19	-	2623	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	201.333358158221	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978278	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965138_4966357_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.31	chr19	-	4692	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	495	junction_16	93.1544416547059	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978276	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.32	chr19	-	2675	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	254.515662037176	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978273	4957256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973711_4973802_4976812_4977088_4978247
ES.17147.33	chr19	-	2699	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	255.979865141821	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	4978279	4957257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973692_4973802_4976812_4977088_4978247
ES.17147.34	chr19	-	2854	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.055984535637	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	4978300	4957257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959686_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.36	chr19	-	4769	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_5	255.527854507225	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978288	4957258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4965556_4965624_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.38	chr19	-	6213	14	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	495	junction_13	101.759258770699	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978277	4957258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4966306_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.4	chr19	-	153	1	Intergenic	novelGene_14295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	9117	False	NA	NA	False	NA	NA	NA	4919133	4918980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4919000_4919100
ES.17147.40	chr19	-	4803	16	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	495	junction_15	96.1263057995399	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978280	4957258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.41	chr19	-	2721	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	495	junction_16	98.9201066517824	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978274	4957258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.42	chr19	-	2610	20	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	290.093690090755	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978296	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973711_4973802_4976812_4976873_4976957_4977088_4978247
ES.17147.43	chr19	-	2665	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.854538536861	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978276	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960061_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.44	chr19	-	3264	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	14	-1	intron_retention	FALSE	canonical	3	18	junction_16	197.256139004595	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978000	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4977975
ES.17147.45	chr19	-	2697	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	297.106316964562	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978247	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973692_4973802_4976812_4977088_4978215
ES.17147.47	chr19	-	4654	17	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_3	204.014054356557	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978279	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4960037_4963800_4963981_4964607_4964729_4964875_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.5	chr19	-	160	1	Intergenic	novelGene_14296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4203	False	NA	NA	False	NA	NA	NA	4924047	4923887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_4923900_4924000
ES.17147.50	chr19	-	2619	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	203.104793378752	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCAGTGTATGTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	4978268	4957259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965060_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.52	chr19	-	4026	17	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_1	201.871855625667	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTGCAGTGTATGTTT	NA	False	NA	-9	True	AATAAA	-13	NA	4978278	4957260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959686_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.53	chr19	-	2656	18	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	203.0039118719	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTGCAGTGTATGTTT	NA	False	NA	-9	True	AATAAA	-13	NA	4978277	4957260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972440_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.56	chr19	-	4086	11	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	3093	-3	intron_retention	FALSE	canonical	0	0	junction_4	322.484728320583	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTGCAGTGTATGTT	NA	False	NA	-10	True	AATAAA	-12	NA	4968327	4957261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4965556_4965624_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272
ES.17147.58	chr19	-	2371	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	-10	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	200.842561164211	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTCTGCAGTGTATG	NA	False	NA	-12	True	AATAAA	-10	NA	4978285	4957263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4978247
ES.17147.59	chr19	-	5400	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	1	-5	intron_retention	FALSE	canonical	3	495	junction_16	99.6517177160033	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTCTGCAGTGTATG	NA	False	NA	-12	True	AATAAA	-10	NA	4978274	4957263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.6	chr19	-	160	2	Antisense	novelGene_ENSMUSG00002074886.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9977	False	NA	NA	False	NA	NA	NA	4983740	4923887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_4924027_4983719
ES.17147.60	chr19	-	2953	16	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	41	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	210.422580114925	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTTTTCAAGAATGAAG	NA	False	NA	NA	False	NA	NA	NA	4978275	4958869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963981_4964607_4964729_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.61	chr19	-	4423	9	NIC	ENSMUSG00000063904.5	novel	2556	17	NA	NA	2221	-16	intron_retention	FALSE	canonical	3	689	junction_4	82.1614264725242	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	4969199	4958926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4960037_4963800_4963981_4964607_4964963_4965046_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272
ES.17147.62	chr19	-	2511	17	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	39	2181	-1	-527	5prime_fragment	FALSE	canonical	3	495	junction_16	93.1544416547059	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTCTCAGCTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	4978276	4959437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.63	chr19	-	3498	14	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	1	2106	intron_retention	FALSE	canonical	0	0	junction_3	212.537584563463	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATGGTTCGGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	4978274	4964675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4964729_4964837_4964963_4965046_4965104_4965551_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.64	chr19	-	990	7	NNC	ENSMUSG00000063904.5	novel	726	5	NA	NA	8	-1254	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	268.105337921911	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGCTGGAGTAATGGGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	4978267	4969152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4969451_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ES.17147.65	chr19	-	5545	6	NIC	ENSMUSG00000024901.16	novel	4110	7	NA	NA	4	0	intron_retention	FALSE	canonical	1	3	junction_3	4.35430821141545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTGGTAAAGGACTTCA	8770	False	NA	NA	False	NA	NA	NA	4993091	4979744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
ES.17147.66	chr19	-	3965	6	NIC	ENSMUSG00000024901.16	novel	4110	7	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	5.95315042645489	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTGGTAAAGGACTTCA	8721	False	NA	NA	False	NA	NA	NA	4993140	4979744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986248_4991787_4991941_4992965
ES.17147.67	chr19	-	4117	7	FSM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	-9	2	-9	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.01386965216377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGCTGGTAAAGGACTT	8697	False	NA	NA	False	NA	NA	NA	4993164	4979746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
ES.17147.69	chr19	-	2191	6	ISM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	20	3398	-9	1871	5prime_fragment	FALSE	canonical	1	3	junction_3	4.35430821141545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTTGCTTTGGGCC	8726	False	NA	NA	False	NA	NA	NA	4993135	4983142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
ES.17147.7	chr19	-	5717	16	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_9	4.81940521918075	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTGTGTGTG	5089	False	NA	NA	False	ATTAAA	-18	NA	4956640	4936905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947723_4949227_4949335_4950518_4950647_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17147.8	chr19	-	5164	18	NNC	ENSMUSG00000006464.10	novel	5602	17	NA	NA	18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.83570915636814	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTGTGTGTG	5101	False	NA	NA	False	ATTAAA	-18	NA	4956628	4936905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_4939947_4940356_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ES.17148.1	chr19	-	149	1	Intergenic	novelGene_14301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	6568	False	NA	NA	False	NA	NA	NA	5017384	5017235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5017200_5017400
ES.17149.1	chr19	-	87	1	Intergenic	novelGene_14302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	5054302	5054215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5054200_5054300
ES.1715.1	chr1	+	744	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	-29	2284	-29	66	multi-exon	FALSE	canonical	3	2655	junction_1	51	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCTAGATGTCAG	NA	False	NA	83	True	AATATA	-21	NA	160022755	160027456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160022882_160024515_160024675_160026997
ES.1715.10	chr1	+	519	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	47	2433	-41	-75	multi-exon	FALSE	canonical	3	2655	junction_1	51	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTGGCTATTTGTC	NA	False	NA	-66	True	NA	NA	NA	160022831	160027307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160022882_160024515_160024675_160026997
ES.1715.2	chr1	+	899	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	14	2086	14	264	multi-exon	FALSE	canonical	3	2655	junction_1	51	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTCATTACTGCGT	NA	False	NA	22	True	AATAAA	-30	NA	160022798	160027654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160022882_160024515_160024675_160026997
ES.1715.4	chr1	+	1234	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	30	1735	30	615	multi-exon	FALSE	canonical	3	2655	junction_1	51	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGGAAACCAATCAT	NA	False	NA	NA	False	CATAAA	-41	NA	160022814	160028005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160022882_160024515_160024675_160026997
ES.1715.5	chr1	+	623	3	NNC	ENSMUSG00000058267.14	novel	2999	3	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1321.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTCTTTCCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	160022815	160027387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160022882_160024515_160024683_160026997
ES.1715.6	chr1	+	2967	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	33	-1	33	1	multi-exon	FALSE	canonical	3	2655	junction_1	51	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGGTTGATCTGGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	160022817	160029741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160022882_160024515_160024675_160026997
ES.1715.8	chr1	+	720	4	NNC	ENSMUSG00000058267.14	novel	2999	3	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1296.8348648408	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTCTTTCCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	160022828	160027387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160022882_160024094_160024213_160024515_160024675_160026997
ES.17150.1	chr19	-	777	4	Antisense	novelGene_ENSMUSG00000024891.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	6.0184900284226	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTGCTGAGACGGCTC	NA	False	NA	NA	False	NA	NA	NA	5073968	5067493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_5067699_5068325_5068385_5069080_5069180_5073554
ES.17150.2	chr19	-	2641	1	Antisense	novelGene_ENSMUSG00000024891.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAGCAAAATCCCAA	NA	False	NA	NA	False	NA	NA	NA	5074390	5071749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_5071700_5074400
ES.17150.3	chr19	-	1192	1	Antisense	novelGene_ENSMUSG00000024891.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATATATATACAAGG	NA	False	NA	NA	False	NA	NA	NA	5074328	5073136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_5073100_5074300
ES.17151.1	chr19	-	179	1	Intergenic	novelGene_14304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGAAC	9583	False	NA	NA	False	NA	NA	NA	5083674	5083495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5083500_5083700
ES.17152.1	chr19	-	359	2	ISM	ENSMUSG00000061451.14	ENSMUST00000143677.2	633	3	404	-32	404	32	3prime_fragment	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCACTCAGCCTGCTGT	NA	False	NA	0	True	AATAAA	-40	NA	5121756	5120854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5121140_5121682
ES.17152.2	chr19	-	596	4	NNC	ENSMUSG00000061451.14	novel	333	3	NA	NA	-1019	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.78423336480244	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTTTCTCCCTTATCA	NA	False	NA	-26	True	AATAAA	-14	NA	5123179	5120880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5121140_5121754_5121923_5122696_5122799_5123112
ES.17152.3	chr19	-	1161	2	ISM	ENSMUSG00000061451.14	ENSMUST00000151413.2	333	3	12699	-1000	-656	5	3prime_fragment	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGACTTTCTCCCTTATC	NA	False	NA	-27	True	AATAAA	-13	NA	5122816	5120881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5121923_5122696
ES.17153.1	chr19	-	362	1	Intergenic	novelGene_14307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	6271	False	NA	NA	False	NA	NA	NA	5128092	5127730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5127700_5128100
ES.17154.1	chr19	-	2616	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	-12	1402	-12	-1402	multi-exon	FALSE	canonical	2	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTTCACACGTGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	5135571	5130759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5133130_5135325
ES.17154.2	chr19	-	1764	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	-4	2246	-4	1326	multi-exon	FALSE	canonical	2	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTGTGATCTGTCCCC	NA	False	NA	NA	False	AGTAAA	-13	NA	5135563	5131603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5133130_5135325
ES.17155.1	chr19	+	1114	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	-4	378	3	2	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTTGACCCTGGTT	NA	False	NA	24	True	NA	NA	NA	5138568	5142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ES.17155.2	chr19	+	1018	7	FSM	ENSMUSG00000024875.6	ENSMUST00000238093.2	1018	7	-2	2	-2	2	multi-exon	FALSE	canonical	2	3	junction_6	209.84657093537	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTTGACCCTGGTT	NA	False	NA	24	True	NA	NA	NA	5138570	5142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142329
ES.17155.3	chr19	+	1472	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	2	14	2	-14	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTTTCAGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	5138574	5142895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ES.17155.6	chr19	+	1159	8	NNC	ENSMUSG00000024875.6	novel	1488	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.069741583959	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGGCTTGACCCTGGT	NA	False	NA	23	True	NA	NA	NA	5138583	5142530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5138777_5139446_5139659_5139799_5139905_5139970_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ES.17155.7	chr19	+	977	8	NNC	ENSMUSG00000024875.6	novel	1488	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.677650887569	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTTGACCCTGGTT	NA	False	NA	24	True	NA	NA	NA	5138588	5142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5138660_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ES.17155.8	chr19	+	936	7	FSM	ENSMUSG00000024875.6	ENSMUST00000237025.2	941	7	3	2	3	2	multi-exon	FALSE	canonical	2	13	junction_5	203.430099925148	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTTGACCCTGGTT	NA	False	NA	24	True	NA	NA	NA	5138590	5142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5142156_5142251_5142329
ES.17156.1	chr19	-	4825	1	Genic_Genomic	ENSMUSG00000024873.8	novel	NA	NA	NA	NA	3276	2586	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5145134	5140309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_5140300_5145100
ES.17156.2	chr19	-	1746	6	FSM	ENSMUSG00000024873.8	ENSMUST00000025805.8	1343	6	-407	4	-407	-4	multi-exon	FALSE	canonical	3	9	junction_5	5.2687759489278	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCCCAATTCTGCTTC	9645	False	NA	-4	True	AATAAA	-14	NA	5148956	5142899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5143526_5143699_5143844_5143947_5144061_5144311_5144360_5144759_5144829_5148210
ES.17157.1	chr19	-	1916	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	16	-19	16	19	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGGTCAGAGTCAGCT	1517	False	NA	19	True	NA	NA	NA	5157084	5149213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.10	chr19	-	1811	6	NNC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	452.316526339686	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCGGTGGTGACTGA	1587	False	NA	-6	True	AATAAA	-37	NA	5157014	5149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5150591_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.11	chr19	-	1639	4	NIC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	503.415225126226	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCGGTGGTGACTGA	1577	False	NA	-6	True	AATAAA	-37	NA	5157024	5149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5150601_5150694_5150827_5155205_5155279_5156952
ES.17157.12	chr19	-	1835	6	NNC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	451.293961847486	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCGGTGGTGACTGA	1564	False	NA	-6	True	AATAAA	-37	NA	5157037	5149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155214_5155279_5156952
ES.17157.13	chr19	-	954	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	57	902	-10	201	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGGGCTCCGCTGTCTG	1558	False	NA	NA	False	NA	NA	NA	5157043	5150134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.2	chr19	-	5666	5	NIC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	994	junction_1	85.5347151746003	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1590	False	NA	0	True	AATAAA	-43	NA	5157011	5149232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5150601_5150694_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.3	chr19	-	2487	6	NNC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	440.944259515871	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTGGTGACTGAGTGT	1596	False	NA	-2	True	AATAAA	-41	NA	5157005	5149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156281
ES.17157.4	chr19	-	1849	6	NNC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	440.944259515871	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTGGTGACTGAGTGT	1557	False	NA	-2	True	AATAAA	-41	NA	5157044	5149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155273_5156952
ES.17157.5	chr19	-	1808	6	NNC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	452.316526339686	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTGGTGACTGAGTGT	1598	False	NA	-2	True	AATAAA	-41	NA	5157003	5149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5150601_5150700_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.6	chr19	-	2159	4	NIC	ENSMUSG00000024870.7	novel	757	5	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1132	junction_1	32.5371582450998	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTGGTGACTGAGTGT	1596	False	NA	-2	True	AATAAA	-41	NA	5157005	5149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5150827_5154668_5154765_5154860_5155279_5156952
ES.17157.8	chr19	-	1968	5	FSM	ENSMUSG00000024870.7	ENSMUST00000236149.2	757	5	-30	-1181	-30	-2	multi-exon	FALSE	canonical	3	1015	junction_3	67.2434941090958	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGTGGTGACTGAGTGT	1538	False	NA	-2	True	AATAAA	-41	NA	5157063	5149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ES.17157.9	chr19	-	4141	1	NIC	ENSMUSG00000024870.7	novel	1913	6	NA	NA	2894	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCGGTGGTGACTGA	5222	False	NA	-6	True	AATAAA	-37	NA	5153379	5149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5149200_5153400
ES.17158.1	chr19	+	2824	2	Antisense	novelGene_ENSMUSG00000024862.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5160071	5165325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5160850_5163279
ES.17158.2	chr19	+	4124	1	Antisense	novelGene_ENSMUSG00000024862.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5161201	5165325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5161200_5165300
ES.17159.1	chr19	-	2906	16	FSM	ENSMUSG00000024862.17	ENSMUST00000116563.8	3169	16	263	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	16.0036107036992	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168325	5157773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
ES.17159.2	chr19	-	3011	16	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	17.0507738501479	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168393	5157773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
ES.17159.3	chr19	-	2975	15	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	19	0	intron_retention	FALSE	canonical	3	42	junction_14	16.5177702700418	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168306	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
ES.17159.4	chr19	-	3682	12	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_11	28.3350671969885	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168306	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161567_5161646_5162969_5163808_5163879_5163968_5164200_5168149
ES.17159.5	chr19	-	2935	15	NIC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	49	0	intron_retention	FALSE	canonical	3	42	junction_14	15.3551493722757	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168276	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
ES.17159.6	chr19	-	2976	16	NNC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	26.0952102884801	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168306	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5162033_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
ES.17159.7	chr19	-	2945	16	NNC	ENSMUSG00000024862.17	novel	3169	16	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	24.9099712297439	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168315	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160496_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168149
ES.17159.8	chr19	-	3538	15	NNC	ENSMUSG00000024862.17	novel	2874	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	24.6009996478491	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168326	5157775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161702_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221
ES.1716.1	chr1	+	6361	1	Antisense	novelGene_ENSMUSG00000014226.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTAAGAGTTGCAAA	NA	False	NA	NA	False	ACTAAA	-16	NA	160029846	160036207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_160029800_160036200
ES.17160.1	chr19	+	180	1	Intergenic	novelGene_14309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5199571	5199751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5199600_5199800
ES.17161.1	chr19	+	157	1	Intergenic	novelGene_14310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	5250852	5251009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5250900_5251000
ES.17162.1	chr19	+	339	1	Intergenic	novelGene_14313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAATTAATAAGCTC	9383	False	NA	NA	False	ACTAAA	-28	NA	5296285	5296624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5296300_5296600
ES.17162.2	chr19	+	158	1	Intergenic	novelGene_14312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGGT	9383	False	NA	NA	False	NA	NA	NA	5296285	5296443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5296300_5296400
ES.17163.1	chr19	-	4855	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	19	-5	2	5	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTATCTTCGATTAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	5323128	5183180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.10	chr19	-	4229	25	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-5	-529	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	17.6493625947228	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTTGGGCTCCTGCCC	NA	False	NA	-5	True	AATAAA	-18	NA	5323152	5183714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566_5322836_5322951
ES.17163.11	chr19	-	4288	24	NNC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	20	-530	intron_retention	FALSE	non_canonical	0	0	junction_9	18.3539037945352	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTTGGGCTCCTGCC	NA	False	NA	-6	True	AATAAA	-17	NA	5323110	5183715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192685_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.12	chr19	-	4334	24	NNC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	3	-530	intron_retention	FALSE	canonical	2	3	junction_14	17.8165403917593	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTTGGGCTCCTGCC	NA	False	NA	-6	True	AATAAA	-17	NA	5323127	5183715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202286_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.13	chr19	-	4615	22	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	0	-530	intron_retention	FALSE	canonical	0	0	junction_12	18.3819392777252	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTTGGGCTCCTGCC	NA	False	NA	-6	True	AATAAA	-17	NA	5323130	5183715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.14	chr19	-	7208	21	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-1	-532	intron_retention	FALSE	canonical	3	64	junction_2	8.18825378209542	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGCCTTGGGCTCCTG	NA	False	NA	-8	True	AATAAA	-15	NA	5323148	5183717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5206530_5209995_5210836_5217951_5218040_5322566
ES.17163.15	chr19	-	4859	23	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	10	-533	intron_retention	FALSE	canonical	3	55	junction_19	9.44197153386309	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAACTGCCTTGGGCTCCT	NA	False	NA	-9	True	AATAAA	-14	NA	5323046	5183718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210836_5217951_5218040_5322566
ES.17163.16	chr19	-	135	1	Intergenic	novelGene_14308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATCACCCATA	NA	False	NA	NA	False	NA	NA	NA	5186149	5186014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5186000_5186100
ES.17163.17	chr19	-	4671	8	NIC	ENSMUSG00000024855.11	novel	3089	21	NA	NA	21	-8450	intron_retention	FALSE	canonical	3	55	junction_4	12.1049829510371	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGTATGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5323109	5200026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210836_5217951_5218040_5322566
ES.17163.18	chr19	-	2558	1	Intergenic	novelGene_14311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGCCAGAGCCACTCA	9882	False	NA	NA	False	TTTAAA	-40	NA	5285531	5282973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5283000_5285500
ES.17163.19	chr19	-	198	1	Intergenic	novelGene_14314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	943	False	NA	NA	False	NA	NA	NA	5306575	5306377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5306400_5306600
ES.17163.2	chr19	-	4720	25	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	17.6493625947228	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACTTGTTATCTTCG	NA	False	NA	NA	False	AATAAA	-23	NA	5323116	5183187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566_5322836_5322951
ES.17163.3	chr19	-	4356	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	-11	524	-11	-524	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGCCCCTCAC	NA	False	NA	0	True	AATAAA	-23	NA	5323158	5183709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.4	chr19	-	4127	22	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-1	-527	intron_retention	FALSE	canonical	1	1	junction_20	18.6971325726676	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGGCTCCTGCCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	5323148	5183712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5217951_5218040_5322566
ES.17163.5	chr19	-	4216	23	NNC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	0	-527	intron_retention	FALSE	non_canonical	0	0	junction_1	24.2230083233154	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGGCTCCTGCCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	5323056	5183712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5185062_5185147_5185268_5186720_5186948_5188957_5189094_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17163.6	chr19	-	4220	23	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	-4	-527	intron_retention	FALSE	canonical	0	0	junction_20	18.6944217604792	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGGCTCCTGCCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	5323151	5183712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5210745_5210836_5217951_5218040_5322566
ES.17163.8	chr19	-	4225	24	NNC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	33	-528	intron_retention	FALSE	canonical	0	0	junction_1	18.3289620726768	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGGCTCCTGCCCC	NA	False	NA	-4	True	AATAAA	-19	NA	5323023	5183713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5185054_5185139_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ES.17164.1	chr19	+	1783	1	Genic_Genomic	ENSMUSG00000047658.7	novel	NA	NA	NA	NA	-345	-8970	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5348013	5349796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_5348000_5349800
ES.17164.2	chr19	+	2465	3	FSM	ENSMUSG00000047658.7	ENSMUST00000061169.7	2421	3	-45	1	-45	-1	multi-exon	FALSE	canonical	2	5	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGGGTGTATGTCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	5348313	5358765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5348529_5352463_5352700_5356751
ES.17165.1	chr19	-	3845	22	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2794	20	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	500.962176257666	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGTGTGTGTGTG	1072	False	NA	-5	True	AATAAA	-38	NA	5348277	5323939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289_5345982_5348172
ES.17165.10	chr19	-	3850	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	1	2	intron_retention	FALSE	canonical	3	1448	junction_14	347.691994431407	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTAACTACTTGGATT	3867	False	NA	-23	True	AATAAA	-20	NA	5345482	5323957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.100	chr19	-	2772	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	510.678320961444	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGCGCTCTTGAACC	3911	False	NA	-23	True	AATAAA	-22	NA	5345438	5324328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5337999_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.103	chr19	-	2798	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	513.071464320517	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACAGGCGCTCTTGAA	3913	False	NA	-25	True	AATAAA	-20	NA	5345436	5324330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333970_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.105	chr19	-	2558	19	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	5	-376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	544.413063154562	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGAATACAGGCGCTC	4948	False	NA	-30	True	AATAAA	-15	NA	5344401	5324335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324864_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334601_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326
ES.17165.106	chr19	-	2918	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-376	intron_retention	FALSE	canonical	3	100	junction_15	509.382065489804	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGAATACAGGCGCTC	3911	False	NA	-30	True	AATAAA	-15	NA	5345438	5324335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5337313_5337562_5337655_5337937_5338035_5338331_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.109	chr19	-	2823	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	12	-380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	706.848498619046	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGATGAATACAGGC	3878	False	NA	-34	True	AATAAA	-11	NA	5345471	5324339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329980_5333670_5333779_5333885_5333976_5334608_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.11	chr19	-	4067	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	12	1	intron_retention	FALSE	canonical	3	1448	junction_13	356.632639429109	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTAACTACTTGGAT	3878	False	NA	-24	True	AATAAA	-19	NA	5345471	5323958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.110	chr19	-	1961	13	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	37	10434	-10	-251	5prime_fragment	FALSE	canonical	3	1448	junction_7	154.302732747458	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATGCATTTGAAGTGA	3903	False	NA	NA	False	NA	NA	NA	5345446	5334393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.111	chr19	-	2317	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-18	2358	-13	1573	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTGTGTAAATCCTGT	3900	False	NA	NA	False	AATACA	-12	NA	5345449	5339658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.112	chr19	-	889	5	ISM	ENSMUSG00000024853.11	ENSMUST00000235182.2	933	9	-26	3794	-21	137	5prime_fragment	FALSE	canonical	3	1668	junction_1	98.2445927265211	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAGCTGTCTTCAGACA	3892	False	NA	62	True	NA	NA	NA	5345457	5341094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.113	chr19	-	2601	3	FSM	ENSMUSG00000024853.11	ENSMUST00000237512.2	455	3	7	-2153	2	-18	multi-exon	FALSE	canonical	3	1856	junction_1	20	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGGAAAAAAGGGG	3920	False	NA	NA	False	NA	NA	NA	5345429	5341990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5344405_5345068_5345116_5345289
ES.17165.12	chr19	-	5283	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-16	1	intron_retention	FALSE	canonical	3	1448	junction_13	354.880713744287	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTAACTACTTGGAT	3897	False	NA	-24	True	AATAAA	-19	NA	5345452	5323958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.13	chr19	-	3201	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	511.054427140593	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3881	False	NA	-25	True	AATAAA	-18	NA	5345468	5323959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336680_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.16	chr19	-	3419	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1448	junction_14	349.14726353553	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3898	False	NA	-25	True	AATAAA	-18	NA	5345451	5323959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.21	chr19	-	3902	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1448	junction_13	356.763382525605	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.26	chr19	-	3169	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	511.96585823666	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325185_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.27	chr19	-	2530	16	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	710.864812902019	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5324969_5333894_5333937_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.29	chr19	-	2528	17	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-1465	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	690.843616416733	1625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	NA	False	NA	-26	True	AATAAA	-17	NA	5338347	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5334938_5335017_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331
ES.17165.31	chr19	-	3396	22	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2754	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	615.004031843429	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	1112	False	NA	-26	True	AATAAA	-17	NA	5348237	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329643_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289_5345632_5348212
ES.17165.32	chr19	-	3584	18	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	1153	-1	intron_retention	FALSE	canonical	0	0	junction_6	667.059881729631	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	6096	False	NA	-26	True	AATAAA	-17	NA	5343253	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5332023_5332173_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107
ES.17165.33	chr19	-	3184	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	629.800912987589	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336594_5336686_5336838_5336977_5337096_5337313_5337564_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.34	chr19	-	3149	13	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-1527	-1	intron_retention	FALSE	canonical	2	14	junction_12	645.118313868773	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	NA	False	NA	-26	True	AATAAA	-17	NA	5338409	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5338331
ES.17165.35	chr19	-	5496	18	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1448	junction_12	364.416706988277	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329978_5333670_5333779_5333885_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.37	chr19	-	3173	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	627.944382489405	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3904	False	NA	-26	True	AATAAA	-17	NA	5345445	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329976_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337945_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.39	chr19	-	3275	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1448	junction_14	349.260461269372	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3911	False	NA	-26	True	AATAAA	-17	NA	5345438	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.43	chr19	-	3151	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	628.015547180163	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3915	False	NA	-26	True	AATAAA	-17	NA	5345434	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329321_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337558_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.48	chr19	-	3976	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	1448	junction_13	350.076221859056	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGGCTAACTACTTGG	3898	False	NA	-26	True	AATAAA	-17	NA	5345451	5323960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.54	chr19	-	3007	20	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	643.525392465536	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3912	False	NA	-27	True	AATAAA	-16	NA	5345437	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329628_5333688_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336937_5337084_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.55	chr19	-	5448	16	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	244	-2	intron_retention	FALSE	canonical	3	1448	junction_11	378.521944175265	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	4162	False	NA	-27	True	AATAAA	-16	NA	5345187	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329641_5329869_5329978_5333670_5333779_5333885_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068
ES.17165.56	chr19	-	5533	17	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1448	junction_11	366.090643659463	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3911	False	NA	-27	True	AATAAA	-16	NA	5345438	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.58	chr19	-	3178	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	513.330544094154	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3913	False	NA	-27	True	AATAAA	-16	NA	5345436	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341447_5343098_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.59	chr19	-	3966	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	1448	junction_13	352.438944891939	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3900	False	NA	-27	True	AATAAA	-16	NA	5345449	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.60	chr19	-	3086	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	2	14	junction_14	520.369738570514	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3903	False	NA	-27	True	AATAAA	-16	NA	5345446	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.61	chr19	-	3229	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	513.071464320517	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3878	False	NA	-27	True	AATAAA	-16	NA	5345471	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333997_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.62	chr19	-	5569	17	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1448	junction_11	361.735567913566	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGGCTAACTACTTG	3921	False	NA	-27	True	AATAAA	-16	NA	5345428	5323961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.63	chr19	-	3139	22	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	500.962176257666	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3902	False	NA	-28	True	AATAAA	-15	NA	5345447	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324077_5324120_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.68	chr19	-	3906	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1448	junction_13	355.882180704808	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3913	False	NA	-28	True	AATAAA	-15	NA	5345436	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.69	chr19	-	3126	22	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	500.962176257666	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3911	False	NA	-28	True	AATAAA	-15	NA	5345438	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324071_5324118_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.71	chr19	-	3222	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	511.251530560056	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3856	False	NA	-28	True	AATAAA	-15	NA	5345493	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336438_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.77	chr19	-	3703	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-1	-3	intron_retention	FALSE	canonical	2	14	junction_13	534.16892875236	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3912	False	NA	-28	True	AATAAA	-15	NA	5345437	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.79	chr19	-	3388	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	1448	junction_14	343.097225828469	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3857	False	NA	-28	True	AATAAA	-15	NA	5345492	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.8	chr19	-	5437	18	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	9	intron_retention	FALSE	canonical	3	1448	junction_12	357.259794202529	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTGGATTTACTAGT	3911	False	NA	-16	True	AATAAA	-27	NA	5345438	5323950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.80	chr19	-	3164	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	616.918655496817	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	3911	False	NA	-28	True	AATAAA	-15	NA	5345438	5323962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338338_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.81	chr19	-	3123	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	627.81776814614	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTACTGGCTAACTACT	3922	False	NA	-29	True	AATAAA	-14	NA	5345427	5323963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329957_5333686_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337653_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.83	chr19	-	4022	22	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2797	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	500.962176257666	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGTACTGGCTAACTA	1069	False	NA	-31	True	AATAAA	-12	NA	5348280	5323965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289_5346222_5348212
ES.17165.84	chr19	-	2789	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-1	-360	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_15	508.369872730476	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGAACCTCTCTCTCT	3912	False	NA	-14	True	AATAAA	-31	NA	5345437	5324319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338008_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.86	chr19	-	4905	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-363	intron_retention	FALSE	canonical	3	1448	junction_13	354.880713744287	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCTCTTGAACCTCTCTC	3911	False	NA	-17	True	AATAAA	-28	NA	5345438	5324322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.87	chr19	-	2867	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	-9	364	-9	-364	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCTCTTGAACCTCTCT	3857	False	NA	-18	True	AATAAA	-27	NA	5345492	5324323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.9	chr19	-	3167	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	513.327914202997	1644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTACTTGGATTTACTAG	3911	False	NA	-17	True	AATAAA	-26	NA	5345438	5323951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336959_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.93	chr19	-	5135	18	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-3	-367	intron_retention	FALSE	canonical	0	0	junction_10	555.992923954873	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCGCTCTTGAACCTC	3910	False	NA	-21	True	AATAAA	-24	NA	5345439	5324326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329978_5333670_5333779_5333885_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337558_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.94	chr19	-	3470	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	12	-367	intron_retention	FALSE	canonical	3	1448	junction_14	347.691994431407	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCGCTCTTGAACCTC	3878	False	NA	-21	True	AATAAA	-24	NA	5345471	5324326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.95	chr19	-	3585	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	1	-369	intron_retention	FALSE	canonical	3	1448	junction_13	352.438944891939	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGCGCTCTTGAACC	3914	False	NA	-23	True	AATAAA	-22	NA	5345435	5324328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17165.96	chr19	-	4272	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	-2	-369	intron_retention	FALSE	canonical	3	1448	junction_14	347.56621163189	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGGCGCTCTTGAACC	3911	False	NA	-23	True	AATAAA	-22	NA	5345438	5324328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ES.17166.1	chr19	-	507	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	-103	1	-103	-1	multi-exon	FALSE	canonical	3	25	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGTTCTTTACTCTTT	9097	False	NA	-4	True	NA	NA	NA	5357547	5355906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5356162_5357295
ES.17166.2	chr19	-	1549	1	Genic_Genomic	ENSMUSG00000118263.2	novel	NA	NA	NA	NA	-11	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGTTCTTTACTCTTT	9189	False	NA	-4	True	NA	NA	NA	5357455	5355906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_5355900_5357500
ES.17167.1	chr19	+	159	1	Intergenic	novelGene_14315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	5379719	5379878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5379700_5379900
ES.17168.1	chr19	-	4494	2	FSM	ENSMUSG00000024846.7	ENSMUST00000237627.2	376	2	-4121	3	-3126	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCTTTCTCCTGTGTG	5722	False	NA	NA	False	AATAAA	-19	NA	5402728	5397887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5398078_5398424
ES.17169.1	chr19	+	3846	1	Genic_Genomic	ENSMUSG00000024841.9	novel	NA	NA	NA	NA	-337	-1277	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTCTGAGTGGCTCT	1455	False	NA	23	True	ATTAAA	-23	NA	5416431	5420277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_5416400_5420300
ES.17169.10	chr19	+	2369	6	NNC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	93	-48	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	303.78479224609	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAACTAGATGGGTT	1885	False	NA	-25	True	TATAAA	-21	NA	5416861	5421506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5417239_5418085_5418305_5418449_5418513_5418644_5418754_5418922_5418971_5419953
ES.17169.11	chr19	+	3215	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-6	10	intron_retention	FALSE	canonical	3	703	junction_1	61.8036204441131	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGAGTTTTTTTTTTTT	1990	False	NA	33	True	NA	NA	NA	5416966	5421564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.12	chr19	+	4567	1	Genic_Genomic	ENSMUSG00000024841.9	novel	NA	NA	NA	NA	17	2	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTATGAAGAGTTTT	2013	False	NA	25	True	AATAAA	-42	NA	5416989	5421556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_5417000_5421600
ES.17169.13	chr19	+	2115	3	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	36	-1279	intron_retention	FALSE	canonical	3	816	junction_2	17	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTGTCTGAGTGGCT	2032	False	NA	21	True	ATTAAA	-21	NA	5417008	5420275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5418754_5418922_5418971_5419953
ES.17169.14	chr19	+	3563	2	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	36	0	intron_retention	FALSE	canonical	3	816	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	2032	False	NA	23	True	AATAAA	-40	NA	5417008	5421554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5418971_5419953
ES.17169.15	chr19	+	2419	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-20	-21	intron_retention	FALSE	canonical	3	716	junction_1	58.2923665671587	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTAACTTCTCT	2053	False	NA	2	True	AATAAA	-19	NA	5417029	5421533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5417239_5418085_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.17	chr19	+	1003	6	NNC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-17	-1279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	303.787030664576	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTGTCTGAGTGGCT	2056	False	NA	21	True	ATTAAA	-21	NA	5417032	5420275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418963_5419955
ES.17169.18	chr19	+	1179	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-12	-1277	intron_retention	FALSE	canonical	3	703	junction_2	44.8406902266234	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTCTGAGTGGCTCT	2061	False	NA	23	True	ATTAAA	-23	NA	5417037	5420277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418971_5419953
ES.17169.19	chr19	+	772	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	4	-1280	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	342.275017347162	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGGTGTCTGAGTGGC	2077	False	NA	20	True	ATTAAA	-20	NA	5417053	5420274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5417239_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.2	chr19	+	1585	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	-306	1277	-306	-1277	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTCTGAGTGGCTCT	1486	False	NA	23	True	ATTAAA	-23	NA	5416462	5420277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.21	chr19	+	2505	4	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	4	-21	intron_retention	FALSE	canonical	3	703	junction_2	50.484320998372	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTAACTTCTCT	2077	False	NA	2	True	AATAAA	-19	NA	5417053	5421533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5417239_5418085_5418305_5418449_5418971_5419953
ES.17169.3	chr19	+	2814	2	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-290	-1279	intron_retention	FALSE	canonical	3	816	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTGTCTGAGTGGCT	1502	False	NA	21	True	ATTAAA	-21	NA	5416478	5420275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5418971_5419953
ES.17169.4	chr19	+	2400	5	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	342.275017347162	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	1729	False	NA	23	True	AATAAA	-40	NA	5416705	5421554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5417239_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.6	chr19	+	2540	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	15	1	15	-1	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTTTTTATGAAGAGT	1807	False	NA	22	True	AATAAA	-39	NA	5416783	5421553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.7	chr19	+	1155	7	NNC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	29	-1279	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_1	279.078244703285	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTGTCTGAGTGGCT	1821	False	NA	21	True	ATTAAA	-21	NA	5416797	5420275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5417040_5417132_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ES.17169.8	chr19	+	3335	2	NIC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	29	-1277	intron_retention	FALSE	canonical	3	703	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTCTGAGTGGCTCT	1821	False	NA	23	True	ATTAAA	-23	NA	5416797	5420277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5418305_5418449
ES.17169.9	chr19	+	1200	6	NNC	ENSMUSG00000024841.9	novel	2556	6	NA	NA	33	-1277	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	303.78479224609	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTCTGAGTGGCTCT	1825	False	NA	23	True	ATTAAA	-23	NA	5416801	5420277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5417239_5418085_5418305_5418449_5418513_5418644_5418754_5418922_5418971_5419953
ES.1717.1	chr1	-	2840	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	24	-766	24	766	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTTTTGTTTGTTT	7320	False	NA	NA	False	AGTAAA	-16	NA	160040421	160029170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.11	chr1	-	3829	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-15	-558	intron_retention	FALSE	canonical	3	4235	junction_3	155.147958055815	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7281	False	NA	-9	True	AATAAA	-16	NA	160040460	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.12	chr1	-	1661	7	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	58	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2263.97529555622	929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7503	False	NA	-9	True	AATAAA	-16	NA	160040238	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035201_160035375_160035948_160036166_160040061
ES.1717.14	chr1	-	1552	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	7	-558	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1769.40995814989	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7303	False	NA	-9	True	AATAAA	-16	NA	160040438	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031313_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.15	chr1	-	2909	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	8	-558	intron_retention	FALSE	canonical	3	4235	junction_3	229.377418243383	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7374	False	NA	-9	True	AATAAA	-16	NA	160040367	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160034280_160035948_160036166_160040216
ES.1717.16	chr1	-	2512	5	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-12	-558	intron_retention	FALSE	canonical	3	4235	junction_4	202.107026102508	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7354	False	NA	-9	True	AATAAA	-16	NA	160040387	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.17	chr1	-	1686	7	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	27	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2107.35398202475	929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAGTTCTGCAATC	7323	False	NA	-9	True	AATAAA	-16	NA	160040418	160030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035201_160035375_160035948_160036166_160040216
ES.1717.19	chr1	-	1479	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	94	-559	at_least_one_novel_splicesite	FALSE	canonical	2	68	junction_5	1799.11249231392	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATGAGTTCTGCAAT	7539	False	NA	-10	True	AATAAA	-15	NA	160040202	160030495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040033
ES.1717.2	chr1	-	3865	5	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	27	764	intron_retention	FALSE	canonical	3	4235	junction_4	202.107026102508	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTTTTTTTTGTTTGT	7323	False	NA	NA	False	AGTAAA	-14	NA	160040418	160029172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.20	chr1	-	1454	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	6	-560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1808.35140390357	929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGATGAGTTCTGCAA	7372	False	NA	-11	True	AATAAA	-14	NA	160040369	160030496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034190_160034280_160035948_160036166_160040216
ES.1717.21	chr1	-	1434	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	-41	705	-41	-705	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAACAAAATACAAA	7255	False	NA	67	True	NA	NA	NA	160040486	160030641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.22	chr1	-	4600	3	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-19	-777	intron_retention	FALSE	canonical	3	4235	junction_2	56.5	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGAGCTGTTCCATTA	7347	False	NA	-5	True	AATAAA	-39	NA	160040394	160030713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160032636_160033665_160036166_160040216
ES.1717.23	chr1	-	2728	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-30	-777	intron_retention	FALSE	canonical	3	4235	junction_3	229.377418243383	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGAGCTGTTCCATTA	7336	False	NA	-5	True	AATAAA	-39	NA	160040405	160030713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160034280_160035948_160036166_160040216
ES.1717.24	chr1	-	4139	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	12	-790	intron_retention	FALSE	canonical	3	4235	junction_3	91.0421147967613	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGCAAAGTTACTACAG	7378	False	NA	-18	True	AATAAA	-26	NA	160040363	160030726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160032636_160033665_160033766_160034182_160036166_160040216
ES.1717.25	chr1	-	2604	3	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	5305	-790	intron_retention	FALSE	canonical	3	4458	junction_2	163	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGCAAAGTTACTACAG	9758	False	NA	-18	True	AATAAA	-26	NA	160034991	160030726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160033766_160034182
ES.1717.26	chr1	-	3492	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	14	-796	intron_retention	FALSE	canonical	3	4235	junction_3	155.147958055815	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATTTGTGCAAAGTTA	7380	False	NA	-24	True	AATAAA	-20	NA	160040361	160030732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.28	chr1	-	1172	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	167	-800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1826.22294367364	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCAAATTTGTGCAAA	7612	False	NA	-28	True	AATAAA	-16	NA	160040129	160030736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040026
ES.1717.29	chr1	-	1144	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	61	893	-9	-893	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTGGCTGGGAGAT	7357	False	NA	89	True	AAAAAG	-36	NA	160040384	160030829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.3	chr1	-	1647	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	-92	543	-92	-543	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGTTTTGAGTGTATT	7204	False	NA	6	True	AATAAA	-31	NA	160040537	160030479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.30	chr1	-	1012	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	87	999	17	-999	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCATTAGCACCCCAGA	7383	False	NA	-17	True	AATAAA	-19	NA	160040358	160030935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ES.1717.4	chr1	-	3211	5	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	2	-554	intron_retention	FALSE	canonical	3	4235	junction_4	204.995579220626	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7298	False	NA	-5	True	AATAAA	-20	NA	160040443	160030490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160036166_160040216
ES.1717.5	chr1	-	4216	4	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	27	-554	intron_retention	FALSE	canonical	3	4235	junction_3	225.439324184777	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7323	False	NA	-5	True	AATAAA	-20	NA	160040418	160030490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160031294_160032537_160033766_160034182_160036166_160040216
ES.1717.6	chr1	-	3798	1	NIC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	6008	-554	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	928	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	NA	False	NA	-5	True	AATAAA	-20	NA	160034288	160030490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160030500_160034300
ES.1717.7	chr1	-	1657	6	NNC	ENSMUSG00000014226.11	novel	2098	6	NA	NA	-522	-557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1826.22294367364	929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTTCTGCAATCT	6774	False	NA	-8	True	AATAAA	-17	NA	160040967	160030493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040622
ES.17170.1	chr19	-	2649	1	Genic_Genomic	ENSMUSG00000024844.16	novel	NA	NA	NA	NA	1067	1990	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAAAAACAAAGACAA	9716	False	NA	NA	False	NA	NA	NA	5415324	5412675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_5412700_5415300
ES.17170.10	chr19	-	1411	2	NIC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	-56	0	intron_retention	FALSE	canonical	3	4588	junction_1	0	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	8687	False	NA	-9	True	AATAAA	-14	NA	5416690	5414668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5415985_5416595
ES.17170.11	chr19	-	749	3	NNC	ENSMUSG00000024844.16	novel	758	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_2	2971.5	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	8979	False	NA	-9	True	AATAAA	-14	NA	5416398	5414668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5415187_5415845_5415985_5416306
ES.17170.18	chr19	-	431	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	567	263	5	-162	multi-exon	FALSE	canonical	3	4588	junction_2	727	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTATGTACTCCAGGG	8748	False	NA	NA	False	CATAAA	-26	NA	5416629	5414928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5415187_5415845_5415985_5416595
ES.17170.2	chr19	-	664	1	Intergenic	novelGene_14316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTTTCTGCATGTTT	9974	False	NA	NA	False	NA	NA	NA	5414542	5413878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5413900_5414500
ES.17170.3	chr19	-	1199	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	67	-5	67	5	multi-exon	FALSE	canonical	3	4588	junction_2	727	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTGTCAGAGAGCAG	8248	False	NA	-1	True	AATAAA	-22	NA	5417129	5414660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5415187_5415845_5415985_5416595
ES.17170.4	chr19	-	868	3	FSM	ENSMUSG00000024844.16	ENSMUST00000237167.2	732	3	-36	-100	-36	-1	multi-exon	FALSE	canonical	3	736	junction_2	2653	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGTTCTGTGTCAGA	8707	False	NA	-7	True	AATAAA	-16	NA	5416670	5414666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5415187_5415845_5415985_5416461
ES.17170.5	chr19	-	861	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	-117	-1	-117	-1	multi-exon	FALSE	canonical	3	1029	junction_1	0	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGTTCTGTGTCAGA	8441	False	NA	-7	True	AATAAA	-16	NA	5416936	5414666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5415187_5416595
ES.17170.6	chr19	-	618	2	NIC	ENSMUSG00000024844.16	novel	758	3	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	935	junction_1	0	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGTTCTGTGTCAGA	8989	False	NA	-7	True	AATAAA	-16	NA	5416388	5414666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5415187_5416290
ES.17170.7	chr19	-	775	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	-16	-1	-16	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8970	False	NA	-8	True	AATAAA	-15	NA	5416407	5414667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5415187_5415845_5415985_5416290
ES.17170.8	chr19	-	763	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3021	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8694	False	NA	-8	True	AATAAA	-15	NA	5416683	5414667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5415187_5415845_5416002_5416595
ES.17170.9	chr19	-	825	3	NNC	ENSMUSG00000024844.16	novel	758	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	746	junction_2	2648	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	9008	False	NA	-9	True	AATAAA	-14	NA	5416369	5414668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5415187_5415845_5415985_5416201
ES.17171.1	chr19	-	3841	6	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-884	-1	intron_retention	FALSE	canonical	3	368	junction_1	59.2978920367326	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGGTTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	5432232	5427551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5432100_5432213
ES.17171.10	chr19	-	2986	18	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	30	0	intron_retention	FALSE	canonical	3	368	junction_1	37.0996040792536	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9070	False	NA	-8	True	AATAAA	-19	NA	5438701	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.12	chr19	-	2883	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	0	intron_retention	FALSE	canonical	3	368	junction_1	45.1945041999195	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9067	False	NA	-8	True	AATAAA	-19	NA	5438704	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.13	chr19	-	3238	16	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	2245	0	intron_retention	FALSE	canonical	3	368	junction_1	46.3374098926079	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	NA	False	NA	-8	True	AATAAA	-19	NA	5435798	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850
ES.17171.14	chr19	-	2520	20	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	109.408153463631	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9066	False	NA	-8	True	AATAAA	-19	NA	5438705	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434976_5435497_5435547_5435839_5435898_5438342
ES.17171.15	chr19	-	2626	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	22	0	intron_retention	FALSE	canonical	3	368	junction_1	44.9014008965103	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9062	False	NA	-8	True	AATAAA	-19	NA	5438709	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.16	chr19	-	2610	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	0	intron_retention	FALSE	canonical	3	368	junction_1	48.0371833859389	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9067	False	NA	-8	True	AATAAA	-19	NA	5438704	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.18	chr19	-	3288	18	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-1	intron_retention	FALSE	canonical	3	6	junction_15	111.118939362834	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9067	False	NA	-9	True	AATAAA	-18	NA	5438704	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17171.2	chr19	-	5793	14	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-9	intron_retention	FALSE	canonical	3	375	junction_5	42.3123074405869	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTATTTATTTGGTT	9067	False	NA	NA	False	AATAAA	-14	NA	5438704	5427559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430556_5431008_5431145_5431237_5431329_5431693_5432100_5432213_5432388_5432742_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.21	chr19	-	2964	18	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-1	intron_retention	FALSE	canonical	3	368	junction_1	46.460683978062	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9067	False	NA	-9	True	AATAAA	-18	NA	5438704	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.22	chr19	-	2930	19	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	30	-1	intron_retention	FALSE	canonical	3	6	junction_16	108.427935901919	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9070	False	NA	-9	True	AATAAA	-18	NA	5438701	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17171.23	chr19	-	3023	18	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	1	junction_14	114.080072649778	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9025	False	NA	-9	True	AATAAA	-18	NA	5438746	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434767_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.24	chr19	-	2346	19	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	112.388284724031	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9067	False	NA	-9	True	AATAAA	-18	NA	5438704	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433091_5433692_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.25	chr19	-	2968	19	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	6	junction_16	110.604972205336	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTGTGCTGCTGT	9022	False	NA	-9	True	AATAAA	-18	NA	5438749	5430087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17171.3	chr19	-	2605	20	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_17	108.195857084755	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCTGCTGTCTAAGGT	9037	False	NA	-2	True	AATAAA	-25	NA	5438734	5430080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17171.30	chr19	-	3328	17	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	26	-3	intron_retention	FALSE	canonical	3	368	junction_1	43.7705308969402	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCTTGGTTGTGCTGCT	9066	False	NA	-11	True	AATAAA	-16	NA	5438705	5430089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.31	chr19	-	2480	18	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-4	intron_retention	FALSE	canonical	0	0	junction_8	115.055485335912	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTCTTGGTTGTGCTGC	9067	False	NA	-12	True	AATAAA	-15	NA	5438704	5430090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.32	chr19	-	3350	17	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	0	-6	intron_retention	FALSE	canonical	3	368	junction_1	37.8986621630632	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTCTTGGTTGTGCT	9040	False	NA	-14	True	AATAAA	-13	NA	5438731	5430092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.33	chr19	-	3956	15	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	26	-7	intron_retention	FALSE	canonical	1	1	junction_12	117.696340518423	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTCTTGGTTGTGC	9066	False	NA	-15	True	AATAAA	-12	NA	5438705	5430093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5431145_5431237_5431782_5431988_5432100_5432213_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435061_5435490_5435547_5435839_5435898_5438342
ES.17171.35	chr19	-	2513	1	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	-692	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTATCATAACAAGAG	9067	False	NA	NA	False	NA	NA	NA	5438704	5436191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5436200_5438700
ES.17171.4	chr19	-	2596	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	-37	2532	-37	4	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGCTGCTGTCTAAG	9003	False	NA	-4	True	AATAAA	-23	NA	5438768	5430082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.7	chr19	-	2631	20	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	142.980520921141	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTTGTGCTGCTGTCT	9022	False	NA	-7	True	AATAAA	-20	NA	5438749	5430085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432404_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17171.8	chr19	-	2935	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	-15	0	intron_retention	FALSE	canonical	3	368	junction_1	44.0094336127333	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9025	False	NA	-8	True	AATAAA	-19	NA	5438746	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ES.17171.9	chr19	-	3006	18	NNC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	27	0	intron_retention	FALSE	canonical	3	6	junction_15	113.753147414534	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9067	False	NA	-8	True	AATAAA	-19	NA	5438704	5430086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5435019_5435490_5435547_5435839_5435898_5438342
ES.17172.1	chr19	+	535	1	FSM	ENSMUSG00000117959.2	ENSMUST00000237256.2	1266	1	484	247	484	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTTGTTTCTAGTTT	NA	False	NA	NA	False	TATAAA	-16	NA	5438847	5439382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5438800_5439400
ES.17173.1	chr19	-	1608	7	ISM	ENSMUSG00000039330.6	ENSMUST00000235569.2	1726	8	1290	0	1290	0	3prime_fragment	TRUE	canonical	3	8	junction_6	13.7234592334926	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTGTGAGACTTCT	6274	False	NA	NA	False	ATTAAA	-13	NA	5451264	5440076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5440226_5440636_5440756_5440941_5441042_5444310_5444482_5449940_5450089_5450261_5450966_5451047
ES.17173.2	chr19	-	181	1	Intergenic	novelGene_14317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAATTGG	9628	False	NA	NA	False	NA	NA	NA	5447910	5447729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5447700_5447900
ES.17173.3	chr19	-	404	3	NNC	ENSMUSG00000039330.6	novel	1726	8	NA	NA	2167	-7653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAATTGG	7151	False	NA	NA	False	NA	NA	NA	5450387	5447729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5447860_5449940_5450089_5450261
ES.17174.1	chr19	+	230	1	Intergenic	novelGene_14318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTGTTGAGATGGT	1087	False	NA	NA	False	AATAAA	-32	NA	5451344	5451574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5451300_5451600
ES.17175.1	chr19	-	186	1	Intergenic	novelGene_14319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTTAAGAAACTGGGG	5900	False	NA	NA	False	NA	NA	NA	5462596	5462410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5462400_5462600
ES.17176.1	chr19	+	1404	2	Fusion	ENSMUSG00000086938.10_ENSMUSG00000047423.11	novel	857	4	NA	NA	-7534	-17	multi-exon	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAGTGTTTTTTACAA	3555	False	NA	17	True	AATAAA	-18	NA	5467637	5477324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_5467696_5475978
ES.17176.2	chr19	+	1551	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	-22	-1	-22	1	multi-exon	FALSE	canonical	3	164	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTCCTGATGGTTA	225	False	NA	35	True	AATAAA	-36	NA	5475149	5477342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5475337_5475978
ES.17176.3	chr19	+	2180	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	-11	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACTGTCCTGATGGT	236	False	NA	33	True	AATAAA	-34	NA	5475160	5477340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_5475200_5477300
ES.17176.4	chr19	+	2604	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	-6	441	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCGATGTAGCCTTGA	254	False	NA	NA	False	NA	NA	NA	5475178	5477782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_5475200_5477800
ES.17176.5	chr19	+	1509	2	FSM	ENSMUSG00000047423.11	ENSMUST00000054477.8	1529	2	2	18	2	-18	multi-exon	FALSE	canonical	3	21	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAGTGTTTTTTACA	262	False	NA	16	True	AATAAA	-17	NA	5475186	5477323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5475337_5475964
ES.17177.1	chr19	-	1120	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	-107	-21	-107	15	multi-exon	TRUE	canonical	3	999	junction_1	76.7282361469506	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGGCTTTGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	5475114	5472817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.10	chr19	-	776	7	NIC	ENSMUSG00000024914.17	novel	939	7	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	498.339799289155	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474835	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473004_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.12	chr19	-	912	7	FSM	ENSMUSG00000024914.17	ENSMUST00000148219.9	727	7	-205	20	15	1	multi-exon	FALSE	canonical	3	40	junction_1	395.234705235031	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474992	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5473004_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.13	chr19	-	936	7	NNC	ENSMUSG00000024914.17	novel	992	7	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.276869069772	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474980	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5473054_5473358_5473448_5473587_5473664_5473795_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.14	chr19	-	975	7	NNC	ENSMUSG00000024914.17	novel	992	7	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.276869069772	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474979	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5473054_5473358_5473448_5473587_5473682_5473773_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.16	chr19	-	1116	6	NIC	ENSMUSG00000024914.17	novel	992	7	NA	NA	-21	1	intron_retention	FALSE	canonical	3	999	junction_1	79.504465283404	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5475028	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473054_5473358_5473448_5473587_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.17	chr19	-	2125	1	NIC	ENSMUSG00000024914.17	novel	992	7	NA	NA	-29	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474978	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5472900_5475000
ES.17177.3	chr19	-	885	7	NNC	ENSMUSG00000024914.17	novel	992	7	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	388.892444428191	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474918	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473913_5474205_5474304_5474388_5474462_5474700
ES.17177.4	chr19	-	967	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	-27	-1	-27	1	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474976	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ES.17177.5	chr19	-	868	6	NIC	ENSMUSG00000024914.17	novel	992	7	NA	NA	2	1	intron_retention	FALSE	canonical	3	999	junction_1	81.5759768559347	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474813	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474462_5474700
ES.17177.6	chr19	-	1155	5	NIC	ENSMUSG00000024914.17	novel	939	7	NA	NA	25	1	intron_retention	FALSE	canonical	3	999	junction_1	87.2707711665252	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474982	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473054_5473358_5473448_5473587_5473920_5474209_5474462_5474700
ES.17177.7	chr19	-	1301	4	NIC	ENSMUSG00000024914.17	novel	890	6	NA	NA	-8	1	intron_retention	FALSE	canonical	3	1031	junction_1	87.7762306474063	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5474823	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473448_5473587_5473920_5474209_5474462_5474700
ES.17177.8	chr19	-	1560	4	NIC	ENSMUSG00000024914.17	novel	939	7	NA	NA	-90	1	intron_retention	FALSE	canonical	3	999	junction_1	17.9133717900592	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	5475097	5472853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5473054_5473358_5473448_5473587_5474462_5474700
ES.17178.1	chr19	-	154	1	Intergenic	novelGene_14320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	9397	False	NA	NA	False	NA	NA	NA	5478936	5478782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5478800_5478900
ES.17179.1	chr19	+	903	1	FSM	ENSMUSG00000117771.2	ENSMUST00000237006.2	728	1	-58	-117	-58	117	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATACTGAGGATTCCAG	5671	False	NA	NA	False	NA	NA	NA	5485967	5486870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5486000_5486900
ES.1718.1	chr1	+	194	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGTTATTAAACTATC	1429	False	NA	NA	False	NA	NA	NA	160046339	160046533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160046300_160046500
ES.17180.1	chr19	-	183	1	Intergenic	novelGene_14321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	5493532	5493349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5493300_5493500
ES.17181.1	chr19	+	160	1	Antisense	novelGene_ENSMUSG00000095098.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	8886	False	NA	NA	False	NA	NA	NA	5503517	5503677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5503500_5503700
ES.17182.1	chr19	-	4212	2	FSM	ENSMUSG00000095098.3	ENSMUST00000236881.2	4165	2	-48	1	-48	-1	multi-exon	FALSE	canonical	3	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTAGAGTCATAT	5283	False	NA	NA	False	NA	NA	NA	5507580	5503213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5507213_5507367
ES.17182.2	chr19	-	4359	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	349	7	-41	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGCTAGAGTCATA	5290	False	NA	NA	False	NA	NA	NA	5507573	5503214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5503200_5507600
ES.17182.3	chr19	-	1060	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	292	3363	-98	-3358	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCCTGGCCAGCTTGTG	5233	False	NA	-4	True	AATAAA	-20	NA	5507630	5506570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5506600_5507600
ES.17182.4	chr19	-	819	2	FSM	ENSMUSG00000095098.3	ENSMUST00000236881.2	4165	2	-16	3362	-16	-3362	multi-exon	FALSE	canonical	3	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAGCCTGGCCAGCT	5315	False	NA	-8	True	AATAAA	-16	NA	5507548	5506574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5507213_5507367
ES.17183.1	chr19	+	1233	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	-16	-2	-2	0	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	17	True	AATAAA	-17	NA	5510640	5515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ES.17183.2	chr19	+	4060	4	NIC	ENSMUSG00000024911.8	novel	1569	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	136	junction_3	9.62635271879577	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510643	5515077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5510807_5510988_5513741_5513814_5514244_5514361
ES.17183.3	chr19	+	1215	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	1	-7	1	7	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTCCAGGTTGAAGG	NA	False	NA	24	True	AATAAA	-24	NA	5510644	5515086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ES.17183.4	chr19	+	1248	9	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	1	453	1	-28	5prime_fragment	FALSE	canonical	3	126	junction_5	12.8737863505652	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACTCATAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	5510644	5514626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361
ES.17183.5	chr19	+	3386	5	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	126	junction_2	11.8953772533703	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCCTTGTTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	5510644	5515078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5510807_5510988_5513333_5513631_5513741_5513814_5514460_5514952
ES.17183.6	chr19	+	2092	7	ISM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	6	0	6	0	intron_retention	FALSE	canonical	3	126	junction_5	12.3107902084129	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	17	True	AATAAA	-17	NA	5510649	5515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814
ES.17183.7	chr19	+	1481	9	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	17	True	AATAAA	-17	NA	5510649	5515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
ES.17183.8	chr19	+	3177	5	NIC	ENSMUSG00000024911.8	novel	1923	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	126	junction_4	14.6714007511212	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCCTTGTTCCAGGT	NA	False	NA	18	True	AATAAA	-18	NA	5510654	5515080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5510807_5510988_5511188_5511417_5512661_5513198_5513333_5513631
ES.17183.9	chr19	+	1907	7	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	126	junction_4	12.0749971244533	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCCTTGTTCCAG	152	False	NA	16	True	AATAAA	-16	NA	5510897	5515078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361
ES.17184.1	chr19	-	1434	10	FSM	ENSMUSG00000024910.6	ENSMUST00000025844.6	1241	10	-3	-190	-3	-7	multi-exon	FALSE	canonical	0	0	junction_5	1.15470053837925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTATGGCAACTTTATT	NA	False	NA	NA	False	NA	NA	NA	5518538	5515077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5515480_5515557_5515759_5515832_5515898_5516047_5516174_5516258_5516340_5516416_5516514_5516608_5516764_5517050_5517165_5517865_5517951_5518430
ES.17184.2	chr19	-	1233	10	FSM	ENSMUSG00000024910.6	ENSMUST00000025844.6	1241	10	8	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	1.15470053837925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGTGGATTCAGCT	NA	False	NA	NA	False	CATAAA	-17	NA	5518527	5515267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5515480_5515557_5515759_5515832_5515898_5516047_5516174_5516258_5516340_5516416_5516514_5516608_5516764_5517050_5517165_5517865_5517951_5518430
ES.17185.1	chr19	+	2514	11	NIC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	23.0008695487801	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTAGCCCAGGAG	NA	False	NA	NA	False	ATTAAA	-14	NA	5523969	5532543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5524352_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.10	chr19	+	1600	11	NNC	ENSMUSG00000024909.16	novel	1557	11	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.6771149042995	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTGAGGTGGGTGAG	NA	False	NA	11	True	AATAAA	-16	NA	5524688	5531882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528362_5530055_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.11	chr19	+	2268	13	Fusion	ENSMUSG00000056201.9_ENSMUSG00000024909.16	novel	1557	11	NA	NA	-12	-42	intron_retention	FALSE	canonical	0	0	junction_10	2294.31014050702	1388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5524703	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5542524_5542833_5543182_5543260_5543408
ES.17185.12	chr19	+	1583	11	NNC	ENSMUSG00000024909.16	novel	1557	11	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	23.9365828806035	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTGAGGTGGGTGAG	NA	False	NA	11	True	AATAAA	-16	NA	5524704	5531882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5524803_5525088_5525207_5525435_5525485_5526079_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.13	chr19	+	1932	2	ISM	ENSMUSG00000024909.16	ENSMUST00000168330.2	406	4	-6	-473	-6	279	intron_retention	FALSE	canonical	3	82	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5530144	5532160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5530178_5530261
ES.17185.14	chr19	+	1232	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	-90	1212	-90	-40	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAACAAAACAAAAAAA	NA	False	NA	-28	True	NA	NA	NA	5540392	5544017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ES.17185.15	chr19	+	2341	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	30	-17	0	17	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	5540512	5545246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ES.17185.17	chr19	+	4209	3	NIC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	-5	17	intron_retention	FALSE	canonical	3	6173	junction_2	53.5	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	False	NA	NA	False	NA	NA	NA	5540538	5545246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5542833_5543182_5543260_5543408
ES.17185.18	chr19	+	938	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	-2	-42	intron_retention	FALSE	canonical	2	40	junction_2	2932.75096491711	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5540541	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5540631_5542524_5542690_5543182_5543260_5543408
ES.17185.19	chr19	+	1028	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	6	-42	intron_retention	FALSE	canonical	2	90	junction_1	2893.10363911607	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5540549	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5540586_5542524_5542833_5543182_5543260_5543408
ES.17185.2	chr19	+	1982	11	FSM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	-11	663	-11	1	multi-exon	FALSE	canonical	2	4	junction_1	23.5805004187782	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTGAGGTGGGTGAG	NA	False	NA	11	True	AATAAA	-16	NA	5523970	5531882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.20	chr19	+	955	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	69	1330	8	-158	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTGTGTGTAAATGAAA	NA	False	NA	-21	True	NA	NA	NA	5540551	5543899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ES.17185.21	chr19	+	2962	3	NIC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	11	-42	intron_retention	FALSE	canonical	3	6173	junction_2	53.5	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5540554	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5542833_5543182_5543260_5543408
ES.17185.22	chr19	+	1057	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	11	-42	intron_retention	FALSE	non_canonical	0	0	junction_3	2976.09871401396	1323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5540554	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5540631_5542524_5542833_5543182_5543260_5543419
ES.17185.23	chr19	+	1281	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	195	-42	intron_retention	FALSE	canonical	3	171	junction_1	2854.92428387631	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	5540787	5544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5541077_5542524_5542833_5543182_5543260_5543408
ES.17185.24	chr19	+	1418	2	ISM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	2710	470	2600	-470	3prime_fragment	FALSE	canonical	3	6173	junction_1	0	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGATCTGTAAGGCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	5543192	5544759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_5543260_5543408
ES.17185.3	chr19	+	2574	10	FSM	ENSMUSG00000024909.16	ENSMUST00000070118.14	1781	10	-794	1	2	-1	multi-exon	FALSE	canonical	3	69	junction_4	6.34209919681348	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5523983	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.4	chr19	+	1897	11	FSM	ENSMUSG00000024909.16	ENSMUST00000235523.2	2215	11	-355	673	6	-9	multi-exon	FALSE	canonical	1	3	junction_1	23.8706933288499	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGAGTCCTGGCTGA	NA	False	NA	1	True	AATAAA	-6	NA	5523987	5531872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5524424_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.5	chr19	+	3288	12	NNC	ENSMUSG00000024909.16	novel	2634	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.4589740823844	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5524009	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5528499_5529847_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.6	chr19	+	1680	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	-124	1	-124	-1	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5524591	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.7	chr19	+	2040	9	NNC	ENSMUSG00000024909.16	novel	2556	9	NA	NA	-70	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	27.5306647213612	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5524645	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5528362_5530055_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.8	chr19	+	1487	10	NIC	ENSMUSG00000024909.16	novel	1557	11	NA	NA	-48	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	25.2938288477205	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5524667	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ES.17185.9	chr19	+	3498	7	NIC	ENSMUSG00000024909.16	novel	1781	10	NA	NA	-43	-1	intron_retention	FALSE	canonical	3	69	junction_3	7.37111479583199	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTGAGGTGGGTG	NA	False	NA	9	True	AATAAA	-14	NA	5524672	5531880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5525207_5525435_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261
ES.17186.1	chr19	-	2877	16	NNC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-2	345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.5963539070184	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGCTCAGGCTGATTC	NA	False	NA	NA	False	NA	NA	NA	5538341	5532027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536240_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.2	chr19	-	2426	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	117	-476	0	-11	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTTCTCAATCCAGC	NA	False	NA	NA	False	NA	NA	NA	5538313	5532383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.3	chr19	-	2011	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	50	6	-41	2	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGCCAAGGTCCTTC	NA	False	NA	-4	True	AATAAA	-33	NA	5538380	5532865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.5	chr19	-	2119	15	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-12	1	intron_retention	FALSE	canonical	3	74	junction_14	11.3560197108613	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCCAAGGTCCTT	NA	False	NA	-5	True	AATAAA	-32	NA	5538351	5532866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.6	chr19	-	2033	14	NIC	ENSMUSG00000024906.11	novel	2070	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	3	junction_3	27.6660131573682	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAATGCCAAGGTC	NA	False	NA	-8	True	AATAAA	-29	NA	5538341	5532869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5533058_5533135_5533220_5533482_5533694_5533957_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.7	chr19	-	1842	14	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	10	-2	intron_retention	FALSE	canonical	3	83	junction_11	9.63597794756283	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAATGCCAAGGTC	NA	False	NA	-8	True	AATAAA	-29	NA	5537953	5532869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789
ES.17186.8	chr19	-	2279	15	NIC	ENSMUSG00000024906.11	novel	2070	16	NA	NA	-17	0	intron_retention	FALSE	canonical	1	3	junction_4	26.6194841943925	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGCTGTTAAGGAAGCAAT	NA	False	NA	-17	True	AATAAA	-20	NA	5538356	5532878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533694_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ES.17186.9	chr19	-	2398	15	NIC	ENSMUSG00000024906.11	novel	2067	16	NA	NA	-12	0	intron_retention	FALSE	canonical	3	74	junction_14	11.862305244525	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCGGCTGTTAAGG	NA	False	NA	-24	True	AATAAA	-13	NA	5538351	5532885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5537136_5537789_5537920_5538015
ES.17187.1	chr19	+	176	1	Intergenic	novelGene_14322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACTATTATGTT	3848	False	NA	NA	False	NA	NA	NA	5557214	5557390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5557200_5557400
ES.17188.1	chr19	-	3404	6	NIC	ENSMUSG00000056185.6	novel	3023	10	NA	NA	-950	-2	intron_retention	FALSE	canonical	3	8	junction_5	2.72763633939717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCGGCTTGCCTTTACTT	NA	False	NA	-2	True	AATAAA	-19	NA	5549284	5545303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5546246_5546343_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207
ES.17188.2	chr19	-	2620	10	FSM	ENSMUSG00000056185.6	ENSMUST00000237924.2	3023	10	-27	430	4	0	multi-exon	FALSE	canonical	2	7	junction_8	2.72618758808562	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCGGCTTGCCTTTAC	46	False	NA	-4	True	AATAAA	-17	NA	5560562	5545305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5546011_5546085_5546246_5546343_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548535_5548747_5548853_5560360
ES.17188.3	chr19	-	2497	11	NIC	ENSMUSG00000056185.6	novel	1872	12	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_8	3.17017349682947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCGGCTTGCCTTTAC	75	False	NA	-4	True	AATAAA	-17	NA	5560533	5545305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5546011_5546085_5546246_5546343_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548423_5548535_5548747_5548853_5560360
ES.17188.4	chr19	-	2261	12	NNC	ENSMUSG00000056185.6	novel	1703	13	NA	NA	5	0	intron_retention	FALSE	canonical	1	1	junction_3	4.08585546440804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCGGCTTGCCTTTAC	89	False	NA	-4	True	AATAAA	-17	NA	5560519	5545305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5545677_5545924_5546011_5546085_5546272_5546343_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548423_5548535_5548747_5548853_5560360
ES.17188.5	chr19	-	1673	13	FSM	ENSMUSG00000056185.6	ENSMUST00000070172.6	1703	13	26	4	-5	0	multi-exon	FALSE	canonical	2	4	junction_1	3.3124344857253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCGGCTTGCCTTTAC	68	False	NA	-4	True	AATAAA	-17	NA	5560540	5545305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5545677_5545924_5546011_5546085_5546246_5546343_5546431_5547013_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548423_5548535_5548747_5548853_5560360
ES.17188.6	chr19	-	4427	1	FSM	ENSMUSG00000100937.2	ENSMUST00000189704.2	1021	1	-3414	8	-3414	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAATGTGTTTCAGTT	3379	False	NA	NA	False	ATTAAA	-10	NA	5557229	5552802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5552800_5557200
ES.17189.1	chr19	-	171	1	Intergenic	novelGene_14323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5570387	5570216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5570200_5570400
ES.1719.1	chr1	+	177	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCAT	NA	False	NA	NA	False	NA	NA	NA	160187901	160188078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160187900_160188100
ES.17190.1	chr19	+	4888	5	NNC	ENSMUSG00000049562.7	novel	2785	3	NA	NA	-88	60265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.73205080756888	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAGGGTTAATCTTG	7878	False	NA	NA	False	NA	NA	NA	5617964	5681554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5618112_5618467_5618636_5618731_5621293_5622380_5624245_5681406
ES.17190.10	chr19	+	188	1	Intergenic	novelGene_14326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	5680673	5680861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5680700_5680900
ES.17190.11	chr19	+	2704	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	13	-1	13	1	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGAGTAGCTGTCTTTC	NA	False	NA	11	True	AATAAA	-17	NA	5687523	5698159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17190.12	chr19	+	3006	10	NIC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	62	0	intron_retention	FALSE	canonical	3	75	junction_9	7.81893870478186	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687572	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17190.13	chr19	+	2576	11	NNC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.2222335600883	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687740	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691404_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17190.14	chr19	+	6895	10	NNC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	26	0	intron_retention	FALSE	non_canonical	0	0	junction_6	37.234989518522	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687772	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5691404_5691491_5695434_5695540_5695616_5696827_5697973_5698015
ES.17190.15	chr19	+	4395	9	NIC	ENSMUSG00000024927.9	novel	2716	11	NA	NA	41	-2	intron_retention	FALSE	canonical	3	73	junction_5	8.36660026534076	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGAGAGTAGCTGTCT	NA	False	NA	8	True	AATAAA	-14	NA	5687787	5698156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5691314_5691491_5691705_5695352_5695434_5695540
ES.17190.16	chr19	+	2576	11	NIC	ENSMUSG00000024927.9	novel	786	5	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	26.9287949971773	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687957	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5688177_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17190.2	chr19	+	2791	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTCCTGGCCTGTTTTC	7960	False	NA	NA	False	NA	NA	NA	5618046	5621289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5618112_5618467_5618636_5618731
ES.17190.3	chr19	+	3327	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	-2	-540	-2	540	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAGAAG	7964	False	NA	NA	False	NA	NA	NA	5618050	5621829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5618112_5618467_5618636_5618731
ES.17190.4	chr19	+	645	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	-20	501	-20	0	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTCTGTGGGCACCTT	5025	False	NA	8	True	AATAAA	-17	NA	5651880	5652966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
ES.17190.5	chr19	+	887	3	FSM	ENSMUSG00000024925.12	ENSMUST00000155639.2	771	3	-110	-6	-8	0	multi-exon	FALSE	canonical	3	241	junction_2	34.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTCTGTGGGCACCTT	5037	False	NA	8	True	AATAAA	-17	NA	5651892	5652966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5652109_5652220_5652403_5652477
ES.17190.6	chr19	+	489	4	NNC	ENSMUSG00000024925.12	novel	1126	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	123.874488450564	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGTCTGTGGGCA	5039	False	NA	4	True	AATAAA	-13	NA	5651894	5652962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5652109_5652220_5652265_5652477_5652598_5652851
ES.17190.7	chr19	+	804	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	0	322	0	179	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCGGTCCTGTACAGA	5045	False	NA	NA	False	TATAAA	-13	NA	5651900	5653145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
ES.17190.8	chr19	+	2750	11	NNC	ENSMUSG00000024927.9	novel	786	5	NA	NA	-12891	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	26.3590591637866	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5674619	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5675013_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17190.9	chr19	+	3199	12	NNC	ENSMUSG00000024927.9	novel	786	5	NA	NA	-12864	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8628736948894	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5674646	5698158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5675013_5685386_5685863_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ES.17191.1	chr19	-	175	1	Intergenic	novelGene_14324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTGTGGTAGTGCACA	NA	False	NA	NA	False	NA	NA	NA	5640702	5640527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5640500_5640700
ES.17192.1	chr19	-	2006	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-214	-406	-6	2	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGAGTTCTTACCAAA	3434	False	NA	-1	True	AATAAA	-20	NA	5660271	5653039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.12	chr19	-	2009	14	NNC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.261697140082	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3611	False	NA	-6	True	AATAAA	-15	NA	5660094	5653044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659976_5660045
ES.17192.14	chr19	-	2333	12	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	148	junction_8	79.8183889001248	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3617	False	NA	-6	True	AATAAA	-15	NA	5660088	5653044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.16	chr19	-	2094	10	NIC	ENSMUSG00000024926.11	novel	1905	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	222	junction_7	60.9553570701998	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTATCAGGAGTTCTT	3634	False	NA	-7	True	AATAAA	-14	NA	5660071	5653045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ES.17192.17	chr19	-	2045	13	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	118	junction_9	100.21144312569	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTATCAGGAGTTCTT	3626	False	NA	-7	True	AATAAA	-14	NA	5660079	5653045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.19	chr19	-	3520	11	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	118	junction_8	108.262643603415	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTATCAGGAGTTCT	3631	False	NA	-8	True	AATAAA	-13	NA	5660074	5653046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653744_5653857_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879
ES.17192.2	chr19	-	5286	8	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	222	junction_4	75.4204541086779	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3634	False	NA	-3	True	AATAAA	-18	NA	5660071	5653041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653744_5653857_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.20	chr19	-	1908	13	NNC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	132.293864811134	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTATCAGGAGTTCT	3964	False	NA	-8	True	AATAAA	-13	NA	5659741	5653046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659695
ES.17192.21	chr19	-	1156	10	ISM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-17	1824	-2	-176	5prime_fragment	FALSE	canonical	3	222	junction_6	66.131182760732	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTCAGTTGACTGCCC	3631	False	NA	NA	False	AATAAA	-19	NA	5660074	5655269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.22	chr19	-	1759	6	NIC	ENSMUSG00000024926.11	novel	1429	9	NA	NA	1	764	intron_retention	FALSE	canonical	3	222	junction_3	77.2409217966746	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTGTGTGCTGGTACAT	3634	False	NA	NA	False	NA	NA	NA	5660071	5656996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5657669_5657743_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ES.17192.3	chr19	-	1956	14	NNC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	153.453576041746	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAGGAGTTCTTACC	3630	False	NA	-4	True	AATAAA	-17	NA	5660075	5653042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655569_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659939_5660045
ES.17192.4	chr19	-	1976	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	177	1	-9	-1	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAGGAGTTCTTACC	3617	False	NA	-4	True	AATAAA	-17	NA	5660088	5653042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.5	chr19	-	3268	11	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	222	junction_7	66.5495304265928	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAGGAGTTCTTACC	3632	False	NA	-4	True	AATAAA	-17	NA	5660073	5653042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653744_5653857_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.6	chr19	-	3338	13	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	118	junction_9	100.427800212668	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3636	False	NA	-5	True	AATAAA	-16	NA	5660069	5653043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653581_5653661_5653744_5653857_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.7	chr19	-	3188	12	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	222	junction_8	63.4650942000261	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3630	False	NA	-5	True	AATAAA	-16	NA	5660075	5653043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653581_5653661_5653744_5653857_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.8	chr19	-	3479	11	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	222	junction_7	65.0169977775043	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3628	False	NA	-6	True	AATAAA	-15	NA	5660077	5653044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653581_5653661_5653744_5653857_5655494_5655570_5655712_5657578_5657669_5657743_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17192.9	chr19	-	2373	11	NIC	ENSMUSG00000024926.11	novel	1386	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	222	junction_7	62.6597957226163	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3427	False	NA	-6	True	AATAAA	-15	NA	5660278	5653044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ES.17193.1	chr19	-	208	1	Intergenic	novelGene_14325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCTCAAAGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	5672790	5672582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5672600_5672800
ES.17194.1	chr19	-	180	1	Intergenic	novelGene_14327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	5693859	5693679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5693700_5693900
ES.17195.1	chr19	-	4092	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	21	-529	1	526	multi-exon	TRUE	canonical	3	17	junction_16	17.2005632175228	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCACCAGCAGATGTC	8145	False	NA	NA	False	NA	NA	NA	5713687	5700686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.10	chr19	-	3674	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	6	0	intron_retention	FALSE	canonical	3	17	junction_15	16.1038297722415	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	8115	False	NA	-6	True	AAAAAG	-21	NA	5713717	5701218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701591_5701663_5701743_5701933_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.11	chr19	-	5134	15	NIC	ENSMUSG00000056917.14	novel	3513	16	NA	NA	437	0	intron_retention	FALSE	canonical	3	39	junction_13	13.997995483319	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	8621	False	NA	-6	True	AAAAAG	-21	NA	5713211	5701218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623
ES.17195.12	chr19	-	3534	18	NNC	ENSMUSG00000056917.14	novel	3812	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.7489685685803	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	8119	False	NA	-6	True	AAAAAG	-21	NA	5713713	5701218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5704838_5704921_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
ES.17195.14	chr19	-	4738	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_15	18.4566759978304	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	8124	False	NA	-6	True	AAAAAG	-21	NA	5713708	5701218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
ES.17195.15	chr19	-	6864	12	NIC	ENSMUSG00000056917.14	novel	3456	16	NA	NA	1	5	intron_retention	FALSE	canonical	3	47	junction_11	12.223808228343	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCAAACAACTCTAT	8145	False	NA	-17	True	AAAAAG	-10	NA	5713687	5701229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623
ES.17195.16	chr19	-	5157	15	NIC	ENSMUSG00000056917.14	novel	3812	18	NA	NA	902	7	intron_retention	FALSE	canonical	3	47	junction_13	12.4482602669397	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	9086	False	NA	-35	True	AAGAAA	-18	NA	5712746	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5711140_5711623
ES.17195.17	chr19	-	3832	18	FSM	ENSMUSG00000056917.14	ENSMUST00000071857.13	3812	18	-46	26	1	7	multi-exon	FALSE	canonical	2	3	junction_16	22.9642417985895	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8098	False	NA	-35	True	AAGAAA	-18	NA	5713734	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5712615_5712870_5713631
ES.17195.19	chr19	-	3894	18	NNC	ENSMUSG00000056917.14	novel	3812	18	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.9089970180329	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8105	False	NA	-35	True	AAGAAA	-18	NA	5713727	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5711979_5712303_5713631
ES.17195.2	chr19	-	3613	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	-26	-3	1	0	multi-exon	FALSE	canonical	3	17	junction_16	17.2005632175228	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTGTGTTCA	8098	False	NA	0	True	AAAAAG	-27	NA	5713734	5701212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.22	chr19	-	3626	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-1	7	intron_retention	FALSE	canonical	3	17	junction_15	17.6320415405843	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8123	False	NA	-35	True	AAGAAA	-18	NA	5713709	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.23	chr19	-	1255	8	NNC	ENSMUSG00000056917.14	novel	3583	16	NA	NA	556	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	26.1502721724627	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	NA	False	NA	-35	True	AAGAAA	-18	NA	5704309	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704073
ES.17195.24	chr19	-	3654	16	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	3	7	intron_retention	FALSE	canonical	3	9	junction_15	18.9743686763662	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8127	False	NA	-35	True	AAGAAA	-18	NA	5713705	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
ES.17195.25	chr19	-	3600	15	NIC	ENSMUSG00000056917.14	novel	3583	16	NA	NA	-6	7	intron_retention	FALSE	canonical	3	8	junction_14	19.5986515571134	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACAACAAGA	8118	False	NA	-35	True	AAGAAA	-18	NA	5713714	5701247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
ES.17195.3	chr19	-	3563	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	18	2	6	1	multi-exon	FALSE	canonical	3	8	junction_15	19.0524422464826	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGTGTTTGTGTGTT	8115	False	NA	-2	True	AAAAAG	-25	NA	5713717	5701214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
ES.17195.4	chr19	-	3464	17	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	21.6519882170206	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8110	False	NA	-3	True	AAAAAG	-24	NA	5713722	5701215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702768_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.5	chr19	-	3623	17	NIC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_16	18.506333375361	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8117	False	NA	-3	True	AAAAAG	-24	NA	5713715	5701215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
ES.17195.6	chr19	-	3678	17	NNC	ENSMUSG00000056917.14	novel	3584	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.6704724221693	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTATTTGTGTTTGTGT	8125	False	NA	-5	True	AAAAAG	-22	NA	5713707	5701217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5701591_5701663_5701840_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ES.17195.7	chr19	-	3698	18	NNC	ENSMUSG00000056917.14	novel	3812	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.376858399933	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTATTTGTGTTTGTGT	8128	False	NA	-5	True	AAAAAG	-22	NA	5713704	5701217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5712781_5712870_5713631
ES.17195.8	chr19	-	4787	13	NIC	ENSMUSG00000056917.14	novel	3513	16	NA	NA	-715	0	intron_retention	FALSE	canonical	0	0	junction_9	22.1691727906619	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	9454	False	NA	-6	True	AAAAAG	-21	NA	5712378	5701218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5706181_5706357_5709361_5709539_5709623_5711140_5711623
ES.17196.1	chr19	+	4123	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-423	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738346	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.10	chr19	+	2767	12	NNC	ENSMUSG00000004054.10	novel	441	3	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	33.4893593561096	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATGTAATGTCACCTT	NA	False	NA	4	True	AATAAA	-16	NA	5738770	5752887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738859_5739504_5739541_5739716_5740022_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746838_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.11	chr19	+	4576	10	NIC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	57	junction_1	13.4577528254576	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738772	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.12	chr19	+	4182	12	FSM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	-292	8	3	0	multi-exon	FALSE	canonical	3	4	junction_1	25.7338571721901	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAATGTAATGTCACC	NA	False	NA	2	True	AATAAA	-14	NA	5738772	5752885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5739295_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.13	chr19	+	3763	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	28.5161980936977	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738772	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746838_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.14	chr19	+	4417	11	NNC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	4	-3	intron_retention	FALSE	canonical	1	1	junction_1	26.9200668647015	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738773	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5739562_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.15	chr19	+	3914	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6799209484995	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738773	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738859_5739343_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.16	chr19	+	3772	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28.6275599743088	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738775	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738859_5739504_5739562_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.18	chr19	+	4126	9	NIC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	13	0	intron_retention	FALSE	canonical	3	12	junction_1	26.2175394535795	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738782	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617
ES.17196.2	chr19	+	3805	13	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.7762690478563	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738749	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5742961_5743050_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.20	chr19	+	7900	11	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	19	-2	intron_retention	FALSE	canonical	3	28	junction_1	20.8731885441587	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCCCAAATGTAATGTCA	NA	False	NA	0	True	AATAAA	-12	NA	5738788	5752883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5738859_5739504_5739541_5739716_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.21	chr19	+	3905	11	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	21	1	intron_retention	FALSE	canonical	3	28	junction_1	20.158372950216	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAATGTAATGTCACCT	NA	False	NA	3	True	AATAAA	-15	NA	5738790	5752886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5738859_5739504_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.22	chr19	+	2619	12	NNC	ENSMUSG00000004054.10	novel	441	3	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	28.9430903557109	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCCCAAATGTAATGTCA	NA	False	NA	0	True	AATAAA	-12	NA	5738828	5752883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738859_5739504_5739541_5739716_5739948_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.23	chr19	+	2575	11	NIC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	31.6810669012267	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5739084	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5739295_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.24	chr19	+	3928	9	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	342	-3	intron_retention	FALSE	canonical	3	57	junction_1	14.2297004536287	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5739503	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5741017_5745188_5745370_5745524_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.25	chr19	+	3400	9	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	630	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28.8289676367365	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAATGTAATGTCACC	NA	False	NA	2	True	AATAAA	-14	NA	5739791	5752885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5741017_5745188_5745370_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.27	chr19	+	9463	9	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-563	0	intron_retention	FALSE	non_canonical	0	0	junction_7	29.7478990854816	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAATGTAATGTCACC	NA	False	NA	2	True	AATAAA	-14	NA	5739961	5752885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5748891_5749918_5750999_5752034
ES.17196.3	chr19	+	2473	11	NIC	ENSMUSG00000004054.10	novel	441	3	NA	NA	-19	-3	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.36439292219	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738750	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5738859_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.4	chr19	+	6658	11	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	14	junction_1	24.3805250148556	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738751	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5750999_5752034
ES.17196.5	chr19	+	3108	10	NIC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_1	24.7206616236522	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738764	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.6	chr19	+	3762	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738764	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.7	chr19	+	3769	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6799209484995	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738769	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5738874_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.8	chr19	+	4402	11	NIC	ENSMUSG00000004054.10	novel	3898	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	50	junction_1	15.6204993518133	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738770	5752893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17196.9	chr19	+	8747	9	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	62	junction_3	11.3736262906779	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	5738770	5752890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ES.17197.1	chr19	-	6744	34	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	6	combination_of_known_splicesites	TRUE	canonical	2	2	junction_1	28.1691401916498	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATTTTCTGTGGGAC	NA	False	NA	4	True	NA	NA	NA	5738709	5714656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.10	chr19	-	6583	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	30.8852799733326	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738709	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738487
ES.17197.11	chr19	-	7386	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	-122	0	-122	0	multi-exon	FALSE	canonical	3	44	junction_25	21.6322679648029	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5739058	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.12	chr19	-	7038	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	26.1736944991918	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738709	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733342_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.13	chr19	-	4813	29	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-710	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	28.5235983575934	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5735407	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119
ES.17197.14	chr19	-	6638	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	32.851519269877	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738651	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731603_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738383
ES.17197.15	chr19	-	7870	31	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	0	intron_retention	FALSE	canonical	3	8	junction_22	26.5555183635258	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738709	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478
ES.17197.17	chr19	-	4977	27	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	20	0	intron_retention	FALSE	canonical	3	30	junction_23	23.1524724867242	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5734677	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576
ES.17197.20	chr19	-	7127	32	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	34	0	intron_retention	FALSE	canonical	2	2	junction_31	29.0259849853618	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738689	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738383
ES.17197.21	chr19	-	6268	33	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	931	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	28.6560796069089	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5737246	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729874_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146
ES.17197.23	chr19	-	4273	25	NNC	ENSMUSG00000054874.13	novel	5276	33	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	26.501539525511	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	136	False	NA	-3	True	NA	NA	NA	5731579	5714663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725089_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459
ES.17197.24	chr19	-	7106	34	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	24	-1	intron_retention	FALSE	canonical	3	44	junction_24	21.8082047895569	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5738699	5714663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.25	chr19	-	5802	25	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	29.6927553827903	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5738714	5714663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727456_5734358_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.26	chr19	-	8679	34	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	42	-1	intron_retention	FALSE	canonical	1	4	junction_9	28.007968169643	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5738681	5714663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722523_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.27	chr19	-	7365	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-93	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_25	25.2461240986992	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCAGTTTTATTTTCT	NA	False	NA	-3	True	NA	NA	NA	5739029	5714663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.28	chr19	-	7071	34	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	29.3198378672527	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCAGTTTTATTTTC	NA	False	NA	-4	True	NA	NA	NA	5738714	5714664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5730245_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.29	chr19	-	5134	29	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-450	1	intron_retention	FALSE	canonical	3	44	junction_24	20.9904011104007	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCAGTTTTATTTTC	NA	False	NA	-4	True	NA	NA	NA	5735147	5714664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119
ES.17197.3	chr19	-	7049	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	24	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_25	25.9383084982592	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTTTTATTTTCTGT	NA	False	NA	-1	True	NA	NA	NA	5738699	5714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731603_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.33	chr19	-	7034	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-122	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_34	30.6917507485943	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCAGTTTTATTTTC	NA	False	NA	-4	True	NA	NA	NA	5739058	5714664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738383
ES.17197.34	chr19	-	7399	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	28.9809626094722	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGCAGTTTTATTTT	NA	False	NA	-5	True	NA	NA	NA	5739059	5714665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733417_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.36	chr19	-	5226	20	NIC	ENSMUSG00000054874.13	novel	5276	33	NA	NA	833	0	intron_retention	FALSE	canonical	3	98	junction_16	11.5621888293833	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGCAGTTTTATTTT	984	False	NA	-5	True	NA	NA	NA	5730731	5714665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270
ES.17197.37	chr19	-	7065	33	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	144	0	intron_retention	FALSE	canonical	3	44	junction_23	22.1436847303582	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGCAGTTTTATTTT	NA	False	NA	-5	True	NA	NA	NA	5738579	5714665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.38	chr19	-	7101	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.6719019777753	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGGCAGTTTTATTT	NA	False	NA	-6	True	NA	NA	NA	5738709	5714666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715688_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.39	chr19	-	7384	32	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	33	-1	intron_retention	FALSE	canonical	0	0	junction_24	36.2067137230988	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGGCAGTTTTATTT	NA	False	NA	-6	True	NA	NA	NA	5738690	5714666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733334_5733441_5733815_5733907_5734320_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737212_5737247_5737478_5737667_5738024
ES.17197.4	chr19	-	7048	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-26	1	combination_of_known_junctions	FALSE	canonical	1	10	junction_25	25.0202686002858	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTTTTATTTTCTGT	NA	False	NA	-1	True	NA	NA	NA	5738749	5714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.40	chr19	-	6559	19	NNC	ENSMUSG00000054874.13	novel	5276	33	NA	NA	-340	-1	intron_retention	FALSE	canonical	0	0	junction_5	29.695210986884	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGGCAGTTTTATTT	NA	False	NA	-6	True	NA	NA	NA	5731904	5714666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717636_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597
ES.17197.42	chr19	-	7385	33	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_22	28.7739031068084	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGGCAGTTTTATT	NA	False	NA	-7	True	NA	NA	NA	5738712	5714667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5730245_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478
ES.17197.44	chr19	-	6928	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_34	28.0219266593577	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGGCAGTTTTATT	NA	False	NA	-7	True	NA	NA	NA	5738713	5714667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737559_5738024
ES.17197.46	chr19	-	7504	34	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-125	0	intron_retention	FALSE	canonical	3	30	junction_24	23.2560704280388	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGGCAGTTTTATT	NA	False	NA	-7	True	NA	NA	NA	5739061	5714667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.48	chr19	-	5486	28	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-729	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	29.3928035386696	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGCAGTTTTAT	NA	False	NA	-8	True	NA	NA	NA	5735426	5714668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715656_5715735_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717410_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119
ES.17197.49	chr19	-	6888	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.8057726463345	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGCAGTTTTAT	NA	False	NA	-8	True	NA	NA	NA	5738710	5714668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716312_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.5	chr19	-	7406	34	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	1	1	intron_retention	FALSE	canonical	3	31	junction_28	24.4194671623317	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTTTTATTTTCTGT	NA	False	NA	-1	True	NA	NA	NA	5738722	5714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478
ES.17197.50	chr19	-	7162	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	29.05822814346	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGCAGTTTTAT	NA	False	NA	-8	True	NA	NA	NA	5738697	5714668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729874_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.52	chr19	-	7354	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	29.8071657161106	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGGTTGGCAGTTTTA	NA	False	NA	-9	True	NA	NA	NA	5739003	5714669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725354_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.53	chr19	-	3513	20	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	625	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	30.291931401501	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGGTTGGCAGTTTTA	NA	False	NA	-9	True	NA	NA	NA	5737552	5714669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727289_5736510_5736555_5736654_5736695_5737146_5737247_5737478
ES.17197.54	chr19	-	5791	30	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-1430	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	26.2815180807316	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGTTGGCAGTTTT	NA	False	NA	-10	True	NA	NA	NA	5736127	5714670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731603_5733334_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119
ES.17197.56	chr19	-	7872	34	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-115	-3	intron_retention	FALSE	canonical	0	0	junction_22	29.4750209415385	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGTTGGCAGTTTT	NA	False	NA	-10	True	NA	NA	NA	5739051	5714670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729874_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478
ES.17197.58	chr19	-	4823	30	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-463	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	28.7313606020527	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTTGGCAGTTT	NA	False	NA	-11	True	NA	NA	NA	5735160	5714671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731576_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119
ES.17197.6	chr19	-	7131	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	28.9832459657783	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTTTTATTTTCTGT	NA	False	NA	-1	True	NA	NA	NA	5738709	5714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5715276_5715356_5715656_5715735_5715924_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17197.7	chr19	-	7393	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_25	22.9138600567203	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5739026	5714662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ES.17198.1	chr19	-	3838	19	FSM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	5	-683	5	9	multi-exon	TRUE	canonical	2	6	junction_10	3.83655259347101	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGCTCAGTAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	5776293	5757394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770212_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.10	chr19	-	3002	4	Fusion	ENSMUSG00000024939.7_ENSMUSG00000079478.10	novel	699	4	NA	NA	-8	0	intron_retention	FALSE	canonical	2	10	junction_1	217.355827056823	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5781735	5778114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_5780741_5781161_5781354_5781471_5781624_5781703
ES.17198.11	chr19	-	2550	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	87	junction_1	171.430744033852	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGATTGCCTGGTTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	5781759	5778115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
ES.17198.12	chr19	-	2557	5	NIC	ENSMUSG00000118125.2	novel	2532	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	241.732289940752	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGATTGCCTGGTTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	5781751	5778115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5778907_5779264_5780741_5781268_5781354_5781466_5781624_5781703
ES.17198.14	chr19	-	1147	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	9	4	7	-4	multi-exon	FALSE	canonical	3	14	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGATTGCCTGGTT	NA	False	NA	-5	True	AATAAA	-13	NA	5779672	5778118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5778858_5779264
ES.17198.16	chr19	-	727	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	-31	3	-26	1	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGTTCTTTCTTGGT	NA	False	NA	0	True	AAAACA	-14	NA	5781786	5780333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
ES.17198.17	chr19	-	883	3	NIC	ENSMUSG00000079478.10	novel	705	4	NA	NA	-10	-19	intron_retention	FALSE	canonical	2	10	junction_1	233	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGTTTTTCCTCCGC	NA	False	NA	-20	True	NA	NA	NA	5781737	5780353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5780741_5781161_5781624_5781703
ES.17198.18	chr19	-	1314	2	NIC	ENSMUSG00000079478.10	novel	610	3	NA	NA	8	-19	intron_retention	FALSE	canonical	3	476	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACAGTTTTTCCTCCGC	NA	False	NA	-20	True	NA	NA	NA	5781747	5780353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5781624_5781703
ES.17198.2	chr19	-	3503	18	FSM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	0	-688	0	9	multi-exon	FALSE	canonical	2	5	junction_10	4.01295480019072	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGCTCAGTAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	5776303	5757394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.3	chr19	-	3576	19	NNC	ENSMUSG00000024937.16	novel	6404	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	4.27200187265877	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	5776302	5758076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5769801_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.4	chr19	-	5728	19	FSM	ENSMUSG00000024937.16	ENSMUST00000049295.15	6404	19	3	673	3	0	multi-exon	FALSE	canonical	1	1	junction_10	4.40398248502365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	5776342	5758076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5767689_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.5	chr19	-	4169	20	Fusion	ENSMUSG00000118125.2_ENSMUSG00000024937.16	novel	6404	19	NA	NA	2042	0	multi-exon	FALSE	canonical	0	0	junction_10	5.13906336788806	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCTGCCCTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	5779699	5758076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5769975_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944_5776635_5779264
ES.17198.6	chr19	-	3163	19	FSM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	-5	2	0	-2	multi-exon	FALSE	canonical	2	6	junction_10	3.83655259347101	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCGCCTGCCCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5776303	5758079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770212_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.8	chr19	-	2813	18	FSM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_10	4.01295480019072	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACCAGCGCCTGCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	5776301	5758082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17198.9	chr19	-	2106	11	NNC	ENSMUSG00000024937.16	novel	2493	12	NA	NA	1	-363	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3.58329457343378	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTTTTGGTGTTCTA	NA	False	NA	NA	False	ATTAAA	-12	NA	5776302	5766778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5766973_5767066_5767225_5769801_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ES.17199.1	chr19	-	174	1	Intergenic	novelGene_14328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACGTG	NA	False	NA	NA	False	NA	NA	NA	5783629	5783455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5783500_5783600
ES.172.1	chr1	-	151	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATATAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	21241471	21241320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_21241300_21241500
ES.1720.1	chr1	+	6100	1	Antisense	novelGene_ENSMUSG00000103432.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAGAA	NA	False	NA	NA	False	NA	NA	NA	160438403	160444503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_160438400_160444500
ES.17200.1	chr19	+	4027	26	NNC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.66713329250714	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	5792441	5808560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5792591_5795467_5795798_5795945_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17200.2	chr19	+	3820	25	NNC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	-293	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.59673940848048	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTCCAGTGGTTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	5795467	5808553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5795798_5795996_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17200.3	chr19	+	3577	25	NNC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.60208249933267	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	5796002	5808560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5796149_5796326_5796433_5796670_5796709_5796928_5797052_5797440_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17200.4	chr19	+	3607	25	NNC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	268	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.51661147842358	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGTTGGAAGCCCAGT	NA	False	NA	NA	False	AATAAA	-22	NA	5796028	5808561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17200.5	chr19	+	3209	20	NNC	ENSMUSG00000024940.12	novel	5729	24	NA	NA	1497	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.49986149200798	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTGGAAGCCCAGTGG	NA	False	NA	NA	False	AATAAA	-24	NA	5797257	5808563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_5797600_5797698_5797900_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17200.6	chr19	+	5954	13	NIC	ENSMUSG00000024940.12	novel	5190	28	NA	NA	-1889	0	intron_retention	FALSE	canonical	1	1	junction_1	1.84654331718003	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	5798789	5808560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_5798997_5800976_5801103_5801199_5801556_5801781_5801905_5802046_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ES.17201.11	chr19	-	2650	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	10	-1	intron_retention	FALSE	canonical	1	1	junction_16	73.2826025994574	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCCCAGCTCAGTCCA	9920	False	NA	-9	True	AATAAA	-15	NA	5821416	5808452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820916_5821247
ES.17201.12	chr19	-	2596	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	153	0	intron_retention	TRUE	canonical	2	3	junction_11	96.5530942021021	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	8954	False	NA	-11	True	AATAAA	-13	NA	5820822	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5815761_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750
ES.17201.13	chr19	-	3866	14	NIC	ENSMUSG00000024941.10	novel	2395	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	43	junction_4	70.1573885745303	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809368_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.14	chr19	-	2734	16	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_13	75.9984210362294	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5820028_5820581_5820750_5820892_5821247
ES.17201.15	chr19	-	3478	15	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	227	junction_10	27.0876317886663	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.16	chr19	-	3169	17	NNC	ENSMUSG00000024941.10	novel	2586	17	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_15	110.099369179619	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9930	False	NA	-11	True	AATAAA	-13	NA	5821406	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820670_5820892_5821247
ES.17201.17	chr19	-	3433	15	NNC	ENSMUSG00000024941.10	novel	2719	16	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_12	74.3078607097883	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9921	False	NA	-11	True	AATAAA	-13	NA	5821415	5808454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820381_5820504_5820581_5820750_5820892_5821247
ES.17201.18	chr19	-	2819	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_14	73.5959195540079	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819835_5820028_5820581_5820750_5820892_5821247
ES.17201.19	chr19	-	3104	15	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	227	junction_12	27.2156917522047	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9926	False	NA	-12	True	AATAAA	-12	NA	5821410	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5820581_5820750_5820892_5821247
ES.17201.2	chr19	-	2731	16	NIC	ENSMUSG00000024941.10	novel	2586	17	NA	NA	10	3	intron_retention	FALSE	canonical	3	22	junction_4	67.168312634919	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGAGTAAATTAAAGGG	9920	False	NA	68	True	NA	NA	NA	5821416	5808375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.20	chr19	-	3093	15	NIC	ENSMUSG00000024941.10	novel	2719	16	NA	NA	10	-1	intron_retention	FALSE	canonical	3	227	junction_11	20.2303066245287	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9920	False	NA	-12	True	AATAAA	-12	NA	5821416	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.21	chr19	-	2648	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_7	73.5959195540079	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9920	False	NA	-12	True	AATAAA	-12	NA	5821416	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810662_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.22	chr19	-	4664	9	NIC	ENSMUSG00000024941.10	novel	2719	16	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	227	junction_4	21.0237960416286	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9925	False	NA	-12	True	AATAAA	-12	NA	5821411	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.23	chr19	-	3839	13	NIC	ENSMUSG00000024941.10	novel	2395	17	NA	NA	16	-1	intron_retention	FALSE	canonical	3	43	junction_3	72.6743115244689	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	10071	False	NA	-12	True	AATAAA	-12	NA	5821265	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809368_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.25	chr19	-	3103	16	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_14	75.1710937351143	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9911	False	NA	-12	True	AATAAA	-12	NA	5821425	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820670_5820892_5821247
ES.17201.26	chr19	-	1825	11	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	261	junction_9	25.0111974923233	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9717	False	NA	-12	True	AATAAA	-12	NA	5816277	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185
ES.17201.28	chr19	-	4431	12	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	227	junction_8	29.7376962542897	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.29	chr19	-	3245	16	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	3	junction_10	75.2052007657863	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9928	False	NA	-12	True	AATAAA	-12	NA	5821408	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810930_5811680_5811837_5814696_5814811_5815337_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.3	chr19	-	2712	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	17	2	-1	-2	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGCCAAGAGTAAATTA	9906	False	NA	63	True	NA	NA	NA	5821430	5808380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.30	chr19	-	3148	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	2	3	junction_11	72.8173013438427	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.31	chr19	-	3849	14	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	227	junction_11	28.221230834648	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5816345_5819496_5820581_5820750_5820892_5821247
ES.17201.32	chr19	-	3236	14	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	227	junction_10	27.9957731382698	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9926	False	NA	-12	True	AATAAA	-12	NA	5821410	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809371_5809692_5809833_5810008_5810174_5810560_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.34	chr19	-	3122	8	NIC	ENSMUSG00000024941.10	novel	2719	16	NA	NA	652	-1	intron_retention	FALSE	canonical	3	227	junction_7	24.7493557945434	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	8635	False	NA	-12	True	AATAAA	-12	NA	5819668	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5809371_5809692_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496
ES.17201.36	chr19	-	2935	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	12	-1	intron_retention	FALSE	canonical	2	3	junction_10	96.7754327037601	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9922	False	NA	-12	True	AATAAA	-12	NA	5821414	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5815761_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.37	chr19	-	2711	16	FSM	ENSMUSG00000024941.10	ENSMUST00000235599.2	2719	16	4	4	1	-1	multi-exon	FALSE	canonical	3	227	junction_11	19.8173885486683	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9911	False	NA	-12	True	AATAAA	-12	NA	5821425	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.38	chr19	-	2652	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	1	1	junction_5	73.3058394246325	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809863_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.39	chr19	-	3622	13	NIC	ENSMUSG00000024941.10	novel	2719	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	227	junction_8	18.1995115929583	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9958	False	NA	-12	True	AATAAA	-12	NA	5821378	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.4	chr19	-	5129	10	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-2	intron_retention	FALSE	canonical	3	227	junction_7	31.0161248385416	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGCCAAGAGTAAATTA	9921	False	NA	63	True	NA	NA	NA	5821415	5808380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5811837_5814696_5815446_5816185_5816345_5819496_5820581_5820750_5820892_5821247
ES.17201.40	chr19	-	3653	14	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-1	intron_retention	FALSE	canonical	3	227	junction_9	28.0763962015897	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.41	chr19	-	3559	13	NIC	ENSMUSG00000024941.10	novel	2395	17	NA	NA	11	-1	intron_retention	FALSE	canonical	1	2	junction_10	102.872190119585	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGTCCCAGCTCAGT	9921	False	NA	-12	True	AATAAA	-12	NA	5821415	5808455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809368_5809692_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5820230_5820581_5820750_5820892_5821247
ES.17201.42	chr19	-	3763	15	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	11	-2	intron_retention	FALSE	canonical	3	227	junction_11	27.0876317886663	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGGGTCCCAGCTCAG	9921	False	NA	-13	True	AATAAA	-11	NA	5821415	5808456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.43	chr19	-	3724	14	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	227	junction_10	27.5573635172828	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGTCCCAGCTCA	9911	False	NA	-14	True	AATAAA	-10	NA	5821425	5808457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5815446_5816185_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.44	chr19	-	3370	16	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	12	-3	intron_retention	FALSE	canonical	3	227	junction_11	26.5019915394213	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGTCCCAGCTCA	9922	False	NA	-14	True	AATAAA	-10	NA	5821414	5808457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.48	chr19	-	3007	17	NNC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	10	-3	intron_retention	FALSE	canonical	2	3	junction_10	96.5931383432591	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGTCCCAGCTCA	9920	False	NA	-14	True	AATAAA	-10	NA	5821416	5808457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5815761_5815972_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.49	chr19	-	2401	16	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	10	-3	intron_retention	FALSE	canonical	1	1	junction_6	75.764430235361	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGTCCCAGCTCA	9966	False	NA	-14	True	AATAAA	-10	NA	5821370	5808457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810076_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.5	chr19	-	3933	14	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	-14	-4	intron_retention	FALSE	canonical	3	227	junction_9	27.9047407479987	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAGCCAAGAGTAAAT	9925	False	NA	61	True	NA	NA	NA	5821411	5808382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.50	chr19	-	251	1	Intergenic	novelGene_14329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCCTGGAGTCATCTCG	9376	False	NA	NA	False	NA	NA	NA	5812914	5812663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5812700_5812900
ES.17201.6	chr19	-	2578	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	14	-6	11	3	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAGCTCAGTCCAACCC	9921	False	NA	-5	True	AATAAA	-19	NA	5821415	5808448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ES.17201.7	chr19	-	4789	12	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	12	2	intron_retention	FALSE	canonical	3	227	junction_8	30.022581033296	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCAGCTCAGTCCAACC	9922	False	NA	-6	True	AATAAA	-18	NA	5821414	5808449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5810174_5810560_5811837_5814696_5814811_5815337_5816345_5819496_5819653_5819748_5820581_5820750_5820892_5821247
ES.17201.8	chr19	-	4237	9	NNC	ENSMUSG00000024941.10	novel	2395	17	NA	NA	-155	2	intron_retention	FALSE	canonical	0	0	junction_4	114.072071516213	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCAGCTCAGTCCAACC	9301	False	NA	-6	True	AATAAA	-18	NA	5820475	5808449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5808725_5808827_5809175_5809298_5809368_5809692_5810172_5810560_5811837_5814696_5815446_5816185_5816345_5819496_5819653_5819748
ES.17201.9	chr19	-	4222	13	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	10	1	intron_retention	FALSE	canonical	3	227	junction_11	29.022979401387	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCCAGCTCAGTCCAAC	9920	False	NA	-7	True	AATAAA	-17	NA	5821416	5808450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5820581_5820750
ES.17202.1	chr19	+	2450	1	Intergenic	novelGene_14330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	6136	False	NA	NA	False	NA	NA	NA	5821508	5823958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5821500_5824000
ES.17203.1	chr19	-	213	1	Intergenic	novelGene_14331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAATCCCAGCACTGG	9451	False	NA	NA	False	NA	NA	NA	5836360	5836147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5836100_5836400
ES.17204.1	chr19	+	157	1	Intergenic	novelGene_14332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5839739	5839896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5839700_5839900
ES.17205.1	chr19	-	167	1	Intergenic	novelGene_14333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTTACCTTTGTGT	8341	False	NA	NA	False	NA	NA	NA	5841668	5841501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5841500_5841700
ES.17206.1	chr19	-	177	2	Intergenic	novelGene_14334	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAATGAACCAAA	7331	False	NA	NA	False	NA	NA	NA	5842678	5842077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5842115_5842538
ES.17207.1	chr19	+	896	1	Antisense	novelGene_ENSMUSG00000092341.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCCATCCCCCCCTC	0	True	NA	NA	False	AAAAAG	-10	NA	5846875	5847771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5846900_5847800
ES.17208.1	chr19	-	1838	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	5580	-435	-140	435	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTCTGAGGTTCTAGAG	9641	False	NA	NA	False	NA	NA	NA	5847120	5845282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5845300_5847100
ES.17208.10	chr19	-	3002	3	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	2	2745	intron_retention	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAGCAAATGAAAGCAAC	4064	False	NA	NA	False	NA	NA	NA	5852697	5849198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5850322_5850441_5850605_5850981
ES.17208.11	chr19	-	3494	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	3486	2	2740	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTTAAGCAAATGAAA	4064	False	NA	NA	False	NA	NA	NA	5852697	5849203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5849200_5852700
ES.17208.12	chr19	-	2135	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	4845	2	1381	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAAATCCACTCTC	4064	False	NA	NA	False	NA	NA	NA	5852697	5850562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5850600_5852700
ES.17208.13	chr19	-	1195	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	4	5784	3	442	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGACTTTTGATAACAG	4065	False	NA	NA	False	ATTAAA	-35	NA	5852696	5851501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5851500_5852700
ES.17208.14	chr19	-	967	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	6013	2	213	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAAGGTTGGATAAGAT	4064	False	NA	14	True	NA	NA	NA	5852697	5851730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5851700_5852700
ES.17208.15	chr19	-	772	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	6208	2	18	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAAAGCTGTTAGAG	4064	False	NA	-20	True	NA	NA	NA	5852697	5851925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5851900_5852700
ES.17208.16	chr19	-	243	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	6737	2	-511	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGTATTTGTACTGT	4064	False	NA	6	True	AAAAAG	-9	NA	5852697	5852454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5852500_5852700
ES.17208.2	chr19	-	3379	1	FSM	ENSMUSG00002076626.1	ENSMUST00020182077.1	86	1	17	-3310	17	3310	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGCTTCTTTGTGCAT	7665	False	NA	0	True	AATAAA	-17	NA	5849096	5845717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5845700_5849100
ES.17208.3	chr19	-	1470	2	FSM	ENSMUSG00000092341.4	ENSMUST00000174808.2	656	2	-811	-3	-299	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGCTTCTTTGTGCA	8970	False	NA	-1	True	AATAAA	-16	NA	5847791	5845718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5845814_5846416
ES.17208.4	chr19	-	3921	2	Fusion	ENSMUSG00002076626.1_ENSMUSG00000092341.4	novel	556	2	NA	NA	-566	0	multi-exon	FALSE	canonical	1	2	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGCTTCTTTGTGCA	7082	False	NA	-1	True	AATAAA	-16	NA	5849679	5845718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_5846057_5846096
ES.17208.5	chr19	-	3359	1	FSM	ENSMUSG00002076626.1	ENSMUST00020182077.1	86	1	-273	-3000	-273	3000	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGCAAAAGA	7375	False	NA	NA	False	NA	NA	NA	5849386	5846027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5846000_5849400
ES.17208.6	chr19	-	4434	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	2546	2	-2542	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTTAAGGCAGGAAAG	4064	False	NA	NA	False	NA	NA	NA	5852697	5848263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5848300_5852700
ES.17208.7	chr19	-	4275	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	3	2705	2	-2701	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTTAGAAGGCTGTCT	4064	False	NA	NA	False	AATAAA	-20	NA	5852697	5848422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5848400_5852700
ES.17208.8	chr19	-	1946	2	Fusion	ENSMUSG00002076626.1_ENSMUSG00000092341.4	novel	485	2	NA	NA	2	605	intron_retention	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTTAGAAGGCTGTCT	4064	False	NA	NA	False	AATAAA	-20	NA	5852697	5848422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_5849403_5851731
ES.17208.9	chr19	-	3601	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	4	3378	3	2848	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAAGATCAAATGTTCA	4065	False	NA	NA	False	AGTAAA	-15	NA	5852696	5849095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5849100_5852700
ES.17209.1	chr19	+	1845	1	Intergenic	novelGene_14335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCGTTGCTCTTTCAGA	NA	False	NA	NA	False	AAAACA	-11	NA	5868244	5870089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5868200_5870100
ES.1721.1	chr1	-	8354	26	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	89	0	intron_retention	FALSE	canonical	1	4	junction_7	11.2214081112844	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTAATTTTTTTCA	NA	False	NA	-9	True	AATAAA	-17	NA	160620419	160046743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568502_160620305
ES.1721.10	chr1	-	2234	1	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGAAACTGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	160276008	160273774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160273800_160276000
ES.1721.11	chr1	-	2059	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAAACATTTCAGTAG	NA	False	NA	NA	False	NA	NA	NA	160453566	160451507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160451500_160453600
ES.1721.12	chr1	-	1105	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTCTAATATATGTA	NA	False	NA	NA	False	NA	NA	NA	160452837	160451732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160451700_160452800
ES.1721.2	chr1	-	8411	27	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	11.0034959479669	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTAATTTTTTTCA	NA	False	NA	-9	True	AATAAA	-17	NA	160620560	160046743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568370_160568453_160568502_160620305
ES.1721.3	chr1	-	3163	1	ISM	ENSMUSG00000026721.17	ENSMUST00000028052.12	6338	9	129133	102	9429	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTAACAAGGTGGCT	3095	False	NA	-111	True	AATAAA	-12	NA	160050008	160046845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160046800_160050000
ES.1721.4	chr1	-	3869	26	NNC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	100	2505	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	10.0300348952534	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGGCTCTGGTATTCT	NA	False	NA	NA	False	AATAAA	-26	NA	160620408	160051106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568432_160568502_160620305
ES.1721.5	chr1	-	3816	26	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	7	2248	intron_retention	FALSE	canonical	1	4	junction_7	11.2214081112844	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAACGTTCCAGAATT	NA	False	NA	NA	False	ACTAAA	-3	NA	160620501	160051363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568502_160620305
ES.1721.6	chr1	-	4525	26	NIC	ENSMUSG00000026721.17	novel	6338	9	NA	NA	90	1008	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	11.034491379307	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTATGCTTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	160620418	160052603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568370_160568453_160568502_160620305
ES.1721.7	chr1	-	2121	7	NNC	ENSMUSG00000026721.17	novel	594	7	NA	NA	-2904	1073	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.8142545141708	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAATTGTGTAATTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	160139645	160063151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160064112_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160134745_160135482_160139613
ES.1721.8	chr1	-	158	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	160157088	160156930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160156900_160157100
ES.1721.9	chr1	-	5801	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATAGGTATAAGGTT	2677	False	NA	NA	False	NA	NA	NA	160210191	160204390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160204400_160210200
ES.17210.1	chr19	+	3080	1	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACGAGATTCAAAGGATAG	3266	False	NA	NA	False	NA	NA	NA	5881899	5884979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5881900_5885000
ES.17210.2	chr19	+	9977	2	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAAAGCCCAGCTCCTC	3267	False	NA	NA	False	NA	NA	NA	5881900	5891936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5890837_5890895
ES.17210.3	chr19	+	9977	2	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAAAGCCCAGCTCCTC	3268	False	NA	NA	False	NA	NA	NA	5881901	5891936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5890799_5890856
ES.17210.4	chr19	+	10035	1	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAAAGCCCAGCTCCTC	3268	False	NA	NA	False	NA	NA	NA	5881901	5891936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5881900_5891900
ES.17211.1	chr19	-	961	1	FSM	ENSMUSG00000092274.4	ENSMUST00000173672.2	20771	1	4685	15125	4466	2474	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACTGCTGGGCAGGCGT	7389	False	NA	NA	False	NA	NA	NA	5890821	5889860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5889900_5890800
ES.17212.1	chr19	-	3230	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1090	-1988	-1090	1988	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCATGGCTGTTACAT	9952	False	NA	-3	True	AATAAA	-24	NA	5895555	5892325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5892300_5895600
ES.17212.2	chr19	-	2374	2	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	439	-1377	439	3	3prime_fragment	FALSE	canonical	3	17	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGAATTGTCATGGCTG	7831	False	NA	-9	True	AATAAA	-18	NA	5894848	5892331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5894463_5894605
ES.17212.3	chr19	-	2805	3	NNC	ENSMUSG00000092274.4	novel	3004	2	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.5	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTAGAATTGTCAT	10003	False	NA	-14	True	AATAAA	-13	NA	5895504	5892336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5894463_5894659_5894787_5894952
ES.17212.4	chr19	-	2919	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1039	-1728	-1039	1728	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTCTGAAAACCCTGTT	10003	False	NA	5	True	NA	NA	NA	5895504	5892585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5892600_5895500
ES.17212.5	chr19	-	2266	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1041	-1073	-1041	1073	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCAAAATTGTTTTGC	10001	False	NA	NA	False	NA	NA	NA	5895506	5893240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5893200_5895500
ES.17212.6	chr19	-	1859	2	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-213	-210	4	210	intron_retention	FALSE	canonical	3	17	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGGATCAAGCTTGGG	10007	False	NA	NA	False	NA	NA	NA	5895500	5893498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5894463_5894605
ES.17212.7	chr19	-	1451	3	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-217	36	0	-36	intron_retention	FALSE	canonical	3	5	junction_2	6	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGGCTTTGGGACGT	10003	False	NA	NA	False	NA	NA	NA	5895504	5893744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_5894463_5894605_5894787_5894952
ES.17213.1	chr19	+	174	1	Intergenic	novelGene_14336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5904103	5904277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5904100_5904300
ES.17214.1	chr19	-	3242	11	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	-7	-1248	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	59.3	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCCACATGTCTTTT	4363	False	NA	NA	False	AATAAA	-40	NA	5925274	5900977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
ES.17214.10	chr19	-	5932	10	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	53	-1540	intron_retention	FALSE	canonical	3	167	junction_1	17.7137736741152	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGGAATGGTTATAA	4423	False	NA	-25	True	AATAAA	-14	NA	5925214	5901269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5923365_5924737_5924823_5925118
ES.17214.12	chr19	-	2960	11	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	-6	-1541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.4875766811251	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTTGGAATGGTTATA	4364	False	NA	-26	True	AATAAA	-13	NA	5925273	5901270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913388_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
ES.17214.13	chr19	-	7411	10	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	22	-1577	intron_retention	FALSE	canonical	0	0	junction_1	86.3152419196883	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTATCACTGGACTTAA	4392	False	NA	0	True	AATAAA	-21	NA	5925245	5901306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5902848_5903031_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5919632_5919763_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.14	chr19	-	3888	13	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	-6	-1580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.7790640985938	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCCTATCACTGGACT	4364	False	NA	-3	True	AATAAA	-18	NA	5925273	5901309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5909385_5909619_5909781_5910542_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.17	chr19	-	2988	11	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	21	-1584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.8405043839724	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4391	False	NA	-7	True	AATAAA	-14	NA	5925246	5901313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923489_5924737_5924823_5925118
ES.17214.18	chr19	-	2820	10	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	10	-1584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.8382603097893	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4380	False	NA	-7	True	AATAAA	-14	NA	5925257	5901313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5920034_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.2	chr19	-	3211	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	20	1273	-15	-1273	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGTCTCACTGTTTTC	4355	False	NA	NA	False	AATAAA	-15	NA	5925282	5901002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.22	chr19	-	2718	11	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	20	-1584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.4052081159898	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4390	False	NA	-7	True	AATAAA	-14	NA	5925247	5901313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920075_5923277_5923365_5924737_5924823_5925118
ES.17214.25	chr19	-	3718	10	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	-6	-1586	intron_retention	FALSE	canonical	3	167	junction_1	19.3620476419435	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGTCTTTCCTATCAC	4364	False	NA	-9	True	AATAAA	-12	NA	5925273	5901315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5902771_5906612_5906818_5912278_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.26	chr19	-	2643	12	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	16	-1586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.9968160664795	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGTCTTTCCTATCAC	4351	False	NA	-9	True	AATAAA	-12	NA	5925286	5901315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5901756_5902014_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.27	chr19	-	184	1	Intergenic	novelGene_14337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAAGATT	8369	False	NA	NA	False	NA	NA	NA	5904474	5904290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5904300_5904500
ES.17214.4	chr19	-	2980	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	2	1522	2	-1522	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGGAATAGCCAGAGTA	4337	False	NA	-7	True	AATAAA	-32	NA	5925300	5901251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.5	chr19	-	3132	12	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	-1	-1534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9177677767354	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGGTTATAATATGGA	4369	False	NA	-19	True	AATAAA	-20	NA	5925268	5901263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5902848_5903031_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
ES.17214.6	chr19	-	2966	11	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	15	-1537	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	59.3	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAATGGTTATAATAT	4350	False	NA	-22	True	AATAAA	-17	NA	5925287	5901266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
ES.17214.8	chr19	-	3026	12	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	37	-1540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.4794011465334	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGGAATGGTTATAA	4407	False	NA	-25	True	AATAAA	-14	NA	5925230	5901269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5902771_5906612_5906818_5910407_5910542_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ES.17214.9	chr19	-	3642	2	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	7757	-1540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGGAATGGTTATAA	6890	False	NA	-25	True	AATAAA	-14	NA	5905953	5901269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5903960_5905001
ES.17215.1	chr19	+	2141	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	340	-1	296	1	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGATCCCTTTCTGTC	3206	False	NA	NA	False	AATAAA	-18	NA	5928184	5935795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
ES.17216.1	chr19	-	174	1	Intergenic	novelGene_14338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAACACTA	NA	False	NA	NA	False	NA	NA	NA	5931964	5931790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5931800_5932000
ES.17217.1	chr19	-	3271	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	59	-1175	17	1170	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCCACCATGCCC	8083	False	NA	NA	False	NA	NA	NA	5944118	5939995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5943146_5943997
ES.17217.2	chr19	-	2109	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	44	2	2	-2	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGATGTGGAGGAC	8068	False	NA	NA	False	AATAAA	-13	NA	5944133	5941172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5943146_5943997
ES.17218.1	chr19	+	149	1	Intergenic	novelGene_14339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5945160	5945309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_5945200_5945300
ES.17219.1	chr19	-	3252	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	66	-4	2	4	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGCTCTGTCTGCAT	1338	False	NA	NA	False	NA	NA	NA	5962833	5946539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.10	chr19	-	4522	5	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	1445	2	intron_retention	FALSE	canonical	3	644	junction_4	59.3506529028957	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	8529	False	NA	-24	True	AATAAA	-16	NA	5955642	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5952245_5952390_5954347_5954481_5954575_5955416
ES.17219.11	chr19	-	3990	9	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	642	junction_2	73.3173751575982	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1337	False	NA	-24	True	AATAAA	-16	NA	5962834	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.12	chr19	-	3406	9	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	27	2	intron_retention	FALSE	canonical	3	642	junction_2	68.376599615658	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1299	False	NA	-24	True	AATAAA	-16	NA	5962872	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952520_5952658_5952797_5954267_5954347_5954481_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.13	chr19	-	3219	10	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	4	2	intron_retention	FALSE	canonical	3	642	junction_2	64.6838465151849	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1340	False	NA	-24	True	AATAAA	-16	NA	5962831	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.14	chr19	-	4672	9	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	7	2	intron_retention	FALSE	canonical	3	642	junction_2	67.7401976303583	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1358	False	NA	-24	True	AATAAA	-16	NA	5962813	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5954347_5954481_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.15	chr19	-	2399	12	FSM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	9	-2	-6	2	multi-exon	FALSE	canonical	3	8	junction_5	287.667249232497	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1360	False	NA	-24	True	AATAAA	-16	NA	5962811	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.16	chr19	-	6307	5	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	642	junction_2	51.2762128086699	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1337	False	NA	-24	True	AATAAA	-16	NA	5962834	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5957190_5962768
ES.17219.17	chr19	-	3850	10	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	2	2	intron_retention	FALSE	canonical	3	642	junction_2	71.5476186074356	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTGGACAGTTTGTCT	1338	False	NA	-24	True	AATAAA	-16	NA	5962833	5947412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.18	chr19	-	4945	7	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	642	junction_2	69.8206034538994	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1357	False	NA	-26	True	AATAAA	-14	NA	5962814	5947414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.19	chr19	-	2318	11	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	230.385090663437	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1340	False	NA	-26	True	AATAAA	-14	NA	5962831	5947414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952463_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.2	chr19	-	4239	9	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	4	254	intron_retention	FALSE	canonical	3	642	junction_2	73.3173751575982	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCATTTTCTCTGTAT	1340	False	NA	NA	False	TATAAA	-40	NA	5962831	5947160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.20	chr19	-	2359	11	NNC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	226.702536377518	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1348	False	NA	-26	True	AATAAA	-14	NA	5962823	5947414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954339_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.21	chr19	-	5018	8	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	642	junction_2	75.1330792117343	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1278	False	NA	-26	True	AATAAA	-14	NA	5962893	5947414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5954347_5954481_5954575_5955416_5956660_5957028_5957190_5962768
ES.17219.22	chr19	-	4331	8	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	642	junction_2	66.6921039906065	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1336	False	NA	-26	True	AATAAA	-14	NA	5962835	5947414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952797_5954267_5954347_5954481_5956660_5957028_5957190_5962768
ES.17219.23	chr19	-	2427	11	NNC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	226.702536377518	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGCTGGACAGTTTG	1336	False	NA	-27	True	AATAAA	-13	NA	5962835	5947415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954396_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.24	chr19	-	8956	6	NNC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	-4	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	318.838768031744	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGCTGGACAGTTT	1362	False	NA	-28	True	AATAAA	-12	NA	5962809	5947416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5949123_5949330_5952245_5952390_5954347_5954481_5956660_5957028_5957190_5962768
ES.17219.25	chr19	-	4804	8	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	642	junction_2	67.7004205214082	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGCTGGACAGTTT	1361	False	NA	-28	True	AATAAA	-12	NA	5962810	5947416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5954347_5954481_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.26	chr19	-	4161	8	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	687	junction_1	53.6549824606918	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTTCTGCTGGACAGT	1336	False	NA	-30	True	AATAAA	-10	NA	5962835	5947418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5952245_5952390_5952797_5954267_5954347_5954481_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.27	chr19	-	177	1	Intergenic	novelGene_14340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4654	False	NA	NA	False	NA	NA	NA	5959517	5959340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5959300_5959500
ES.17219.3	chr19	-	2617	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	75	622	-4	249	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACTTTAGCATTTTCTC	1347	False	NA	NA	False	TATAAA	-35	NA	5962824	5947165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.4	chr19	-	5803	7	NIC	ENSMUSG00000024826.16	novel	2406	12	NA	NA	-5	26	intron_retention	FALSE	canonical	3	642	junction_2	70.8223520899691	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTGTTGAAAGGTTGT	1361	False	NA	0	True	AATAAA	-40	NA	5962810	5947388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5954347_5954481_5956660_5957028_5957190_5962768
ES.17219.5	chr19	-	2540	10	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	4	26	intron_retention	FALSE	canonical	3	642	junction_2	69.6722485802075	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTGTTGAAAGGTTGT	1340	False	NA	0	True	AATAAA	-40	NA	5962831	5947388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.6	chr19	-	2431	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	27	856	27	15	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCTTGACTCCTTGT	1299	False	NA	-11	True	AATAAA	-29	NA	5962872	5947399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ES.17219.8	chr19	-	4196	9	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	1	5	intron_retention	FALSE	canonical	3	642	junction_2	65.5510297401955	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACAGTTTGTCTCTT	1337	False	NA	-21	True	AATAAA	-19	NA	5962834	5947409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5956660_5957028_5957190_5962768
ES.17219.9	chr19	-	5696	8	NIC	ENSMUSG00000024826.16	novel	3314	11	NA	NA	-30	3	intron_retention	FALSE	canonical	3	642	junction_2	69.4979077647196	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGACAGTTTGTCTC	1306	False	NA	-23	True	AATAAA	-17	NA	5962865	5947411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5954347_5954481_5956660_5957028_5957190_5962768
ES.1722.1	chr1	+	201	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGGGATGTGGAAGCA	NA	False	NA	NA	False	AAAACA	-11	NA	160725868	160726069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160725900_160726100
ES.17220.1	chr19	+	805	2	FSM	ENSMUSG00000110156.3	ENSMUST00000209642.2	647	2	78	-236	-53	0	multi-exon	FALSE	canonical	3	13	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCACACTACACAGCGG	9302	False	NA	3	True	NA	NA	NA	5962927	5964857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5963101_5964225
ES.17220.2	chr19	+	1866	1	FSM	ENSMUSG00000110156.3	ENSMUST00000235359.2	1843	1	-31	8	3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTAAGCTCACACTA	9358	False	NA	-5	True	NA	NA	NA	5962983	5964849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_5963000_5964800
ES.17221.1	chr19	-	1481	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	4	1926	4	-1926	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGCATCCTGTCCCCT	NA	False	NA	-14	True	AATAAA	-17	NA	5974840	5967589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5969022_5974791
ES.17222.1	chr19	+	7861	6	Antisense	novelGene_ENSMUSG00000024833.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5992621	6005636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_5993358_5993582_5993692_5996497_5996572_5997731_6001231_6001656_6003182_6003718
ES.17223.1	chr19	-	3668	16	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	10	-1	intron_retention	FALSE	canonical	3	334	junction_15	37.9385468004948	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATCTTTTTTTTTTC	1690	False	NA	-1	True	AATAAA	-20	NA	6014166	5990570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.10	chr19	-	2331	18	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	99.0095238507326	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1637	False	NA	-6	True	AATAAA	-15	NA	6014219	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003840_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.11	chr19	-	3066	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	2	-6	intron_retention	FALSE	canonical	3	334	junction_16	38.1800320029986	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1628	False	NA	-6	True	AATAAA	-15	NA	6014228	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.12	chr19	-	5619	15	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	334	junction_14	38.9531377269599	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1653	False	NA	-6	True	AATAAA	-15	NA	6014203	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.14	chr19	-	2369	18	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.7378224045075	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1663	False	NA	-6	True	AATAAA	-15	NA	6014193	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993349_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.15	chr19	-	1637	11	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	125.166329338205	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1603	False	NA	-6	True	AATAAA	-15	NA	6014253	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6013833
ES.17223.16	chr19	-	2998	17	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-3	-6	intron_retention	FALSE	canonical	1	6	junction_12	101.748291601137	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1623	False	NA	-6	True	AATAAA	-15	NA	6014233	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003840_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.17	chr19	-	9618	9	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-3475	-6	intron_retention	FALSE	canonical	3	352	junction_6	34.6678435297034	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	8491	False	NA	-6	True	AATAAA	-15	NA	6007365	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_6001233_6001658_6003182_6003718
ES.17223.18	chr19	-	2469	18	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	132.625940669268	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1665	False	NA	-6	True	AATAAA	-15	NA	6014191	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997896_5998429_5998555_6000473_6000517_6001201_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.19	chr19	-	1215	6	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	2265	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	169.900441435565	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	5996769	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993428_5993582_5993692_5996497
ES.17223.2	chr19	-	2440	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	-20	1	-20	-1	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATCTTTTTTTTTTC	1606	False	NA	-1	True	AATAAA	-20	NA	6014250	5990570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.20	chr19	-	5818	15	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	352	junction_6	36.0306700419722	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1643	False	NA	-6	True	AATAAA	-15	NA	6014213	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6009153_6011118
ES.17223.21	chr19	-	2353	18	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	100.253139808798	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGATTTTAATCTTTTT	1681	False	NA	-7	True	AATAAA	-14	NA	6014175	5990576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997737_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.23	chr19	-	2069	15	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	15	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	106.841791296042	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATTTTAATCTTTT	1695	False	NA	-8	True	AATAAA	-13	NA	6014161	5990577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6013853
ES.17223.24	chr19	-	4075	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	203	-8	intron_retention	FALSE	canonical	3	334	junction_16	37.8829921435728	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATTTTAATCTTTT	1883	False	NA	-8	True	AATAAA	-13	NA	6013973	5990577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.25	chr19	-	2354	16	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-2744	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	161.591611443444	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATTTTAATCTTTT	9222	False	NA	-8	True	AATAAA	-13	NA	6006634	5990577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6001933_6002506_6003092_6003182_6003718_6003913_6006035_6006143_6006613
ES.17223.26	chr19	-	4772	16	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	165	-8	intron_retention	FALSE	canonical	3	334	junction_15	37.6761639944054	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATTTTAATCTTTT	1845	False	NA	-8	True	AATAAA	-13	NA	6014011	5990577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.27	chr19	-	4969	16	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	165	-9	intron_retention	FALSE	canonical	3	334	junction_15	39.4067112163511	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTGATTTTAATCTTT	1845	False	NA	-9	True	AATAAA	-12	NA	6014011	5990578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.28	chr19	-	3577	4	NNC	ENSMUSG00000024833.16	novel	1477	12	NA	NA	-896	-11	intron_retention	FALSE	canonical	0	0	junction_1	198.226021388605	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAACTGATTTTAATCT	NA	False	NA	-11	True	AATAAA	-10	NA	5994792	5990580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991103_5991285_5992151_5992377_5993358_5993582
ES.17223.3	chr19	-	2988	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	37	junction_16	94.3527291603163	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATCTTTTTTTTTTC	1682	False	NA	-1	True	AATAAA	-20	NA	6014174	5990570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
ES.17223.30	chr19	-	2418	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	2	-29	2	29	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGACTATGTTGCACC	1628	False	NA	NA	False	NA	NA	NA	6014228	5991105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.31	chr19	-	2358	18	NIC	ENSMUSG00000024833.16	novel	2391	18	NA	NA	0	29	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	120.985772276849	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGACTATGTTGCACC	1659	False	NA	NA	False	NA	NA	NA	6014197	5991105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
ES.17223.32	chr19	-	2518	19	NNC	ENSMUSG00000024833.16	novel	2391	18	NA	NA	-2	29	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	143.991994376231	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGACTATGTTGCACC	1657	False	NA	NA	False	NA	NA	NA	6014199	5991105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5993816_5993946_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.33	chr19	-	2413	18	NNC	ENSMUSG00000024833.16	novel	2391	18	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	126.47285907674	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1654	False	NA	NA	False	NA	NA	NA	6014202	5991133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003962_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.34	chr19	-	172	1	Intergenic	novelGene_14341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAGAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	5997478	5997306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_5997300_5997500
ES.17223.4	chr19	-	2408	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAATCTTTTTTTTTT	1608	False	NA	-2	True	AATAAA	-19	NA	6014248	5990571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
ES.17223.5	chr19	-	2002	19	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	271	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.5723378376838	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTAATCTTTTTTTTT	1951	False	NA	-3	True	AATAAA	-18	NA	6013905	5990572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5990717_5990807_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17223.6	chr19	-	4166	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	0	-5	intron_retention	FALSE	canonical	2	5	junction_10	130.504789184152	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTAATCTTTTTTT	1659	False	NA	-5	True	AATAAA	-16	NA	6014197	5990574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6001933_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
ES.17223.7	chr19	-	2300	19	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	97.5723378376838	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1642	False	NA	-6	True	AATAAA	-15	NA	6014214	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853_6013915_6014013
ES.17223.8	chr19	-	1648	12	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	116.87529555361	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1616	False	NA	-6	True	AATAAA	-15	NA	6014240	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6011199_6011244_6013853
ES.17223.9	chr19	-	2296	18	NNC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	190	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	100.071151158152	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTTTAATCTTTTTT	1870	False	NA	-6	True	AATAAA	-15	NA	6013986	5990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997896_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ES.17224.1	chr19	+	175	1	Intergenic	novelGene_14342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	6028743	6028918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6028700_6028900
ES.17225.1	chr19	-	4417	7	NNC	ENSMUSG00000037451.9	novel	1897	10	NA	NA	-15	4	intron_retention	FALSE	canonical	0	0	junction_2	2.6718699236469	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGCTGGGTCTTTGCA	8709	False	NA	NA	False	AATAAA	-23	NA	6036186	6020257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6020582_6021426_6021630_6021746_6021856_6022883_6023099_6030387_6030504_6031657_6031782_6032860
ES.17225.2	chr19	-	680	4	NIC	ENSMUSG00000037451.9	novel	1897	10	NA	NA	4471	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGATGCTGGGTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	6031700	6020260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6020582_6021426_6021634_6021746_6021856_6031657
ES.17226.1	chr19	-	3609	21	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	43	8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	51.2800887284724	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGTTATTCTCCCCA	2054	False	NA	2	True	AATAAA	-22	NA	6065776	6038564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ES.17226.10	chr19	-	3018	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.0817675308402	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2061	False	NA	-7	True	AATAAA	-13	NA	6065769	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044929_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065710
ES.17226.12	chr19	-	3359	21	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	66.0817675308402	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2094	False	NA	-7	True	AATAAA	-13	NA	6065736	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064298_6065135
ES.17226.13	chr19	-	2190	16	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	5919	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.7907646088889	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	8516	False	NA	-7	True	AATAAA	-13	NA	6059314	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039217_6039341_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044920_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116
ES.17226.14	chr19	-	3165	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.7935407163956	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	1713	False	NA	-7	True	AATAAA	-13	NA	6066117	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065911
ES.17226.15	chr19	-	3016	21	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	51.2800887284724	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2638	False	NA	-7	True	AATAAA	-13	NA	6065192	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044929_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ES.17226.16	chr19	-	3082	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.0817675308402	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	1994	False	NA	-7	True	AATAAA	-13	NA	6065836	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065713
ES.17226.2	chr19	-	2237	16	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	5918	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.9724097399985	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTCTGGGTGTTATT	8515	False	NA	-5	True	AATAAA	-15	NA	6059315	6038571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6059279
ES.17226.20	chr19	-	2163	15	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	6187	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.9623142869656	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	8784	False	NA	-11	True	AATAAA	-9	NA	6059046	6038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6058994
ES.17226.21	chr19	-	2673	19	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	1308	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.3644205591467	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	3905	False	NA	-11	True	AATAAA	-9	NA	6063925	6038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6063869
ES.17226.22	chr19	-	2923	20	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.244509078684	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTACATCTGTCTCTGGGT	2610	False	NA	-11	True	AATAAA	-9	NA	6065220	6038577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ES.17226.23	chr19	-	177	1	Intergenic	novelGene_14343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGTTTTTGTTGGG	9017	False	NA	NA	False	NA	NA	NA	6048735	6048558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6048600_6048700
ES.17226.3	chr19	-	3397	21	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	-275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.7794990107684	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	1628	False	NA	-6	True	AATAAA	-14	NA	6066202	6038572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
ES.17226.4	chr19	-	4708	21	NIC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_20	55.8568706606448	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2638	False	NA	-6	True	AATAAA	-14	NA	6065192	6038572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064298_6065135
ES.17226.5	chr19	-	6282	19	NIC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	41	0	intron_retention	FALSE	canonical	3	139	junction_18	25.0846099096834	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2638	False	NA	-6	True	AATAAA	-14	NA	6065192	6038572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044630_6044708_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ES.17226.6	chr19	-	4155	20	NNC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	126	0	intron_retention	FALSE	canonical	0	0	junction_10	50.7496162124047	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2137	False	NA	-6	True	AATAAA	-14	NA	6065693	6038572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ES.17226.9	chr19	-	5391	20	NIC	ENSMUSG00000024942.20	novel	3062	22	NA	NA	31	0	intron_retention	FALSE	canonical	2	82	junction_9	37.3552979180795	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	2628	False	NA	-7	True	AATAAA	-13	NA	6065202	6038573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044630_6044708_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ES.17227.1	chr19	-	178	1	Intergenic	novelGene_14344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATTAAAAAAAAAAAG	8460	False	NA	NA	False	NA	NA	NA	6068746	6068568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6068600_6068700
ES.17228.1	chr19	-	282	1	Intergenic	novelGene_14345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGGGAGAGTGACTGTC	7419	False	NA	NA	False	NA	NA	NA	6072904	6072622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6072600_6072900
ES.17229.1	chr19	+	136	1	Intergenic	novelGene_14346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	6078458	6078594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6078500_6078600
ES.1723.1	chr1	+	4320	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-34	6720	-34	441	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCGTTTCCAAGAATTC	NA	False	NA	NA	False	AATAGA	-7	NA	160733953	160795828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.10	chr1	+	4273	19	NIC	ENSMUSG00000040423.12	novel	11006	20	NA	NA	22	603	combination_of_known_splicesites	FALSE	canonical	2	2	junction_13	5.67782126532596	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTAGTTTCAACT	NA	False	NA	NA	False	ATTAAA	-16	NA	160734009	160795990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.11	chr1	+	8321	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	22	2663	22	-2663	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTTTGTGTAAAAACC	NA	False	NA	NA	False	AGTAAA	-14	NA	160734009	160799885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.12	chr1	+	1341	3	NNC	ENSMUSG00000040423.12	novel	11006	20	NA	NA	70	-20097	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGTGTGTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	160734057	160759604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160734270_160757533_160757915_160758856
ES.1723.13	chr1	+	173	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAGAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	160749431	160749604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160749400_160749600
ES.1723.14	chr1	+	3353	2	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160749534	160753512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160749816_160750440
ES.1723.15	chr1	+	3826	1	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	160749717	160753543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160749700_160753500
ES.1723.16	chr1	+	5903	1	NIC	ENSMUSG00000040423.12	novel	11121	21	NA	NA	5733	-10472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGAAGAGTGCTGCTC	NA	False	NA	NA	False	NA	NA	NA	160763326	160769229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160763300_160769200
ES.1723.17	chr1	+	174	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGGGGGGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	160781502	160781676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160781500_160781700
ES.1723.18	chr1	+	2775	1	ISM	ENSMUSG00000040423.12	ENSMUST00000239200.2	11121	21	65575	211	21016	-211	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTTCCTTTATTACCT	7344	False	NA	NA	False	ATTAAA	-21	NA	160799562	160802337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160799600_160802300
ES.1723.2	chr1	+	5257	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-16	5765	-16	1396	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGGAAGAATTTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	160733971	160796783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.4	chr1	+	6708	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-7	4305	-7	2856	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTAACTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	160733980	160798243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.5	chr1	+	4083	20	NNC	ENSMUSG00000040423.12	novel	11006	20	NA	NA	-7	229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	5.92987646608655	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAACTTTATTTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	160733980	160795616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791275_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.6	chr1	+	3609	18	NNC	ENSMUSG00000040423.12	novel	11006	20	NA	NA	-5	-3037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	6.19073981972841	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAAACCATGTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	160733982	160792350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792133
ES.1723.7	chr1	+	11011	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	-5	0	-5	0	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTAGTCTTTTTCTT	NA	False	NA	16	True	ATTAAA	-22	NA	160733982	160802548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.1723.8	chr1	+	4504	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	1	6501	1	660	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTGTCAAGCATT	NA	False	NA	NA	False	NA	NA	NA	160733988	160796047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ES.17230.1	chr19	-	163	1	Intergenic	novelGene_14347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6087357	6087194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6087200_6087400
ES.17231.1	chr19	+	177	1	Intergenic	novelGene_14348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATTTTTAAAAAGA	6015	False	NA	NA	False	NA	NA	NA	6091114	6091291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6091100_6091300
ES.17232.1	chr19	+	3330	16	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	31.1593752611741	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGTGTCACCTAGGGTA	731	False	NA	18	True	AATAAA	-21	NA	6096597	6103747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097012_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.10	chr19	+	3336	14	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-9	0	intron_retention	FALSE	canonical	3	101	junction_1	11.1519892353483	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTAGAACGTGTCACCT	1215	False	NA	12	True	AATAAA	-15	NA	6097081	6103741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6100122_6100199_6100266_6100354_6100472_6100551_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.11	chr19	+	3731	15	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	88	junction_11	14.3514558743803	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	1215	False	NA	8	True	AATAAA	-11	NA	6097081	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6102510_6102577
ES.17232.12	chr19	+	6481	3	NIC	ENSMUSG00000024807.19	novel	3159	16	NA	NA	-8	0	intron_retention	FALSE	canonical	3	130	junction_2	2	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAGAACGTGTCAC	1216	False	NA	10	True	AATAAA	-13	NA	6097082	6103739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6098638_6098724_6100266_6100354
ES.17232.13	chr19	+	4244	14	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	88	junction_10	14.8088411142779	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAGAACGTGTCAC	1221	False	NA	10	True	AATAAA	-13	NA	6097087	6103739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6102510_6102577
ES.17232.14	chr19	+	3058	15	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	88	junction_10	14.2363432589888	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAGAACGTGTCAC	1222	False	NA	10	True	AATAAA	-13	NA	6097088	6103739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.15	chr19	+	3072	15	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-1	5	intron_retention	FALSE	canonical	3	88	junction_10	14.321384039831	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGTGTCACCTAGGGTA	1223	False	NA	18	True	AATAAA	-21	NA	6097089	6103747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.16	chr19	+	2197	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	486	781	1	-778	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCTCTTCCATGCTT	1225	False	NA	NA	False	NA	NA	NA	6097091	6102961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.17	chr19	+	3558	14	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	88	junction_10	14.2351344656255	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTAGAACGTGTCACCT	1229	False	NA	12	True	AATAAA	-15	NA	6097095	6103741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357
ES.17232.18	chr19	+	5262	10	NIC	ENSMUSG00000024807.19	novel	3159	16	NA	NA	1	5	intron_retention	FALSE	canonical	3	88	junction_8	14.950122836937	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGTGTCACCTAGGGTA	1229	False	NA	18	True	AATAAA	-21	NA	6097095	6103747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099928_6100021_6100122_6100199_6100266_6100354_6100716_6100970_6101100_6101184
ES.17232.19	chr19	+	2824	16	NNC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	32.4235853799189	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAGAACGTGTCAC	1229	False	NA	10	True	AATAAA	-13	NA	6097095	6103739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101463_6102357_6102510_6102577
ES.17232.2	chr19	+	3463	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	6	-5	6	5	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGTGTCACCTAGGGTA	745	False	NA	18	True	AATAAA	-21	NA	6096611	6103747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.20	chr19	+	4296	13	NNC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_7	35.0050591581655	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGATTGGTAGAACGTG	1243	False	NA	6	True	AATAAA	-9	NA	6097109	6103735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099928_6100021_6100122_6100203_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6102510_6102577
ES.17232.21	chr19	+	3146	16	FSM	ENSMUSG00000024807.19	ENSMUST00000134667.8	3159	16	11	2	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	32.5211725905858	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	1254	False	NA	8	True	AATAAA	-11	NA	6097120	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6097361_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.22	chr19	+	3122	14	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-8	16	intron_retention	FALSE	canonical	3	88	junction_10	13.1998744838931	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTAGGGCTGGGCTC	1259	False	NA	29	True	AATAAA	-32	NA	6097125	6103758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357
ES.17232.23	chr19	+	3192	11	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	1418	-2	intron_retention	FALSE	canonical	3	88	junction_6	14.641038214553	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	2685	False	NA	8	True	AATAAA	-11	NA	6098551	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6098638_6098724_6098774_6099179_6099928_6100021_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.24	chr19	+	170	1	Intergenic	novelGene_14349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAAAACAAATAAAAGC	269	False	NA	NA	False	NA	NA	NA	6106050	6106220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6106000_6106200
ES.17232.28	chr19	+	651	4	NIC	ENSMUSG00000038274.14	novel	613	5	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	11442	junction_1	1225.19776181462	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATGTTTTCTTCAT	1045	False	NA	3	True	AATAAA	-15	NA	6107936	6109548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6108032_6108272_6108603_6109173_6109230_6109378
ES.17232.29	chr19	+	1367	2	FSM	ENSMUSG00000038274.14	ENSMUST00000236021.2	370	2	-45	-952	-33	0	multi-exon	FALSE	canonical	3	11442	junction_1	0	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	1047	False	NA	1	True	AATAAA	-13	NA	6107938	6109546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6108032_6108272
ES.17232.3	chr19	+	3270	16	NNC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	115	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	32.5020341243779	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	940	False	NA	8	True	AATAAA	-11	NA	6096806	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099167_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.31	chr19	+	562	5	FSM	ENSMUSG00000038274.14	ENSMUST00000236217.2	503	5	-60	1	-33	-1	multi-exon	FALSE	canonical	3	54	junction_1	6188.20864628852	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATGTTTTCTTCAT	1047	False	NA	3	True	AATAAA	-15	NA	6107938	6109548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6108032_6108257_6108356_6108457_6108603_6109173_6109230_6109378
ES.17232.32	chr19	+	459	6	NNC	ENSMUSG00000038274.14	novel	613	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5562.83478093678	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATGTTTTCTTCAT	1089	False	NA	3	True	AATAAA	-15	NA	6107980	6109548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378_6109409_6109454
ES.17232.33	chr19	+	1570	1	Genic_Genomic	ENSMUSG00000038274.14	novel	NA	NA	NA	NA	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTTTTCTTCATTT	1089	False	NA	5	True	AATAAA	-17	NA	6107980	6109550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_6108000_6109600
ES.17232.34	chr19	+	733	4	FSM	ENSMUSG00000038274.14	ENSMUST00000179142.2	736	4	-3	6	-3	-1	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATGTTTTCTTCAT	1102	False	NA	3	True	AATAAA	-15	NA	6107993	6109548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ES.17232.4	chr19	+	3237	21	Fusion	ENSMUSG00000024807.19_ENSMUSG00000038274.14	novel	3464	16	NA	NA	128	1	intron_retention	FALSE	canonical	0	0	junction_15	5432.80330860597	836	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCTTCATTTGTAAG	953	False	NA	10	True	AATAAA	-22	NA	6096819	6109555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_6097012_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102960_6106762_6106827_6107707_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
ES.17232.5	chr19	+	3216	15	NNC	ENSMUSG00000024807.19	novel	3363	16	NA	NA	-24	0	intron_retention	FALSE	canonical	1	1	junction_11	32.8260722659316	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAGAACGTGTCAC	1200	False	NA	10	True	AATAAA	-13	NA	6097066	6103739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100864_6100970_6101100_6101184_6101341_6101422_6101610_6102357
ES.17232.6	chr19	+	2389	11	NNC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.1751295782061	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTAGAACGTGTCACCT	1204	False	NA	12	True	AATAAA	-15	NA	6097070	6103741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099249_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.7	chr19	+	3245	15	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	101	junction_1	11.8409958902733	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	1208	False	NA	8	True	AATAAA	-11	NA	6097074	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.8	chr19	+	3143	16	NNC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	31.828428941575	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACGTGTCACCTAGGGT	1212	False	NA	17	True	AATAAA	-20	NA	6097078	6103746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100864_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17232.9	chr19	+	2274	10	NNC	ENSMUSG00000024807.19	novel	2780	14	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.5415373324287	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGGTAGAACGTGTC	1213	False	NA	8	True	AATAAA	-11	NA	6097079	6103737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6097159_6097946_6098015_6100203_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ES.17233.1	chr19	-	1762	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	2	0	2	0	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAAACTCCTGTAACAC	NA	False	NA	0	True	ATTAAA	-42	NA	6107813	6103651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ES.17233.2	chr19	-	1499	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	-8	273	-8	2	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGTTCAGAACCTGC	NA	False	NA	-13	True	ATTAAA	-17	NA	6107823	6103924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ES.17233.3	chr19	-	1116	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	33	615	6	-340	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTTTGCTGTTCTGG	NA	False	NA	-2	True	TATAAA	-13	NA	6107782	6104266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ES.17233.4	chr19	-	841	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	-38	961	-38	348	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGTGCATTGTGTG	9998	False	NA	82	True	NA	NA	NA	6107853	6104612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ES.17233.5	chr19	-	534	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	1	776	1	258	multi-exon	FALSE	canonical	3	20	junction_2	445.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGTCCACTTGAG	NA	False	NA	-8	True	CATAAA	-18	NA	6107787	6104702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6105013_6105105_6105231_6107688
ES.17234.1	chr19	+	1307	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	-7	-19	-7	19	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATAGTGCCCTGTCC	2526	False	NA	30	True	AATAAA	-41	NA	6111214	6112521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6111200_6112500
ES.17235.1	chr19	-	1287	1	Antisense	novelGene_ENSMUSG00000075227.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAACAAAAAAAAA	7143	False	NA	NA	False	NA	NA	NA	6111379	6110092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_6110100_6111400
ES.17236.1	chr19	+	862	1	Antisense	novelGene_ENSMUSG00000024797.15_AS_novelGene_ENSMUSG00000100621.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6127013	6127875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_6127000_6127900
ES.17237.1	chr19	+	2042	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	-15	-3	-15	3	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTGCTTTTTATTTGG	NA	False	NA	38	True	AATAAA	-23	NA	6134997	6141810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.10	chr19	+	2140	6	NNC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	127	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	177.187584215148	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGTTTGCAGACTGCTT	NA	False	NA	29	True	AATAAA	-14	NA	6135139	6141801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6139831_6140555_6140677
ES.17237.12	chr19	+	3674	6	NNC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	144	9414	intron_retention	FALSE	non_canonical	0	0	junction_5	185.908579683671	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAGGAAGACA	NA	False	NA	NA	False	NA	NA	NA	6135156	6151221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6143124_6150866
ES.17237.13	chr19	+	3417	5	NNC	ENSMUSG00000024791.11	novel	1794	5	NA	NA	-62	1273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.188672733837	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTTACATGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	6135718	6143080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6136157_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.14	chr19	+	1794	5	FSM	ENSMUSG00000024791.11	ENSMUST00000156961.8	1794	5	-5	5	-5	-5	multi-exon	FALSE	canonical	2	8	junction_1	194.824921403808	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCAGACTGCTTT	NA	False	NA	30	True	AATAAA	-15	NA	6135775	6141802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6135869_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.15	chr19	+	1801	5	FSM	ENSMUSG00000024791.11	ENSMUST00000152528.2	1735	5	-71	5	5	-5	multi-exon	FALSE	canonical	1	1	junction_1	197.768014350147	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCAGACTGCTTT	NA	False	NA	30	True	AATAAA	-15	NA	6135785	6141802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6135886_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.16	chr19	+	2261	5	NNC	ENSMUSG00000024791.11	novel	1794	5	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.188672733837	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGCAGACTGCTTTTT	NA	False	NA	32	True	AATAAA	-17	NA	6135798	6141804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6136357_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.17	chr19	+	2038	5	NNC	ENSMUSG00000024791.11	novel	1794	5	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.188672733837	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGCAGACTGCTTTTT	NA	False	NA	32	True	AATAAA	-17	NA	6135821	6141804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6136157_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.18	chr19	+	3274	1	Genic_Genomic	ENSMUSG00000117666.2	novel	NA	NA	NA	NA	-1154	-1696	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGTGTCAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	6143294	6146568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_6143300_6146600
ES.17237.19	chr19	+	5692	18	NNC	ENSMUSG00000054999.3	novel	2491	18	NA	NA	-3003	198	intron_retention	FALSE	canonical	0	0	junction_1	1.99306757012911	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTATTGTTTGGAGATC	NA	False	NA	9	True	AATAAA	-16	NA	6152808	6166020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6155507_6155586_6156028_6156115_6156289_6156374_6156497_6156852_6156976_6158487_6158772_6158852_6158958_6159448_6159535_6159663_6159784_6162182_6162269_6162358_6162423_6162504_6162573_6162724_6162817_6162905_6162997_6164471_6164808_6164883_6164972_6165075_6165169_6165398
ES.17237.2	chr19	+	1975	6	NNC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	61	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	176.489546432643	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACGTTTGCAGACTGCTT	NA	False	NA	29	True	AATAAA	-14	NA	6135073	6141801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6135239_6135427_6135520_6136431_6136498_6136563_6136618_6140080_6140555_6140677
ES.17237.20	chr19	+	4135	10	NIC	ENSMUSG00000054999.3	novel	2491	18	NA	NA	2735	202	intron_retention	FALSE	canonical	1	2	junction_2	1.52347880008912	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTTTGGAGATCATAA	NA	False	NA	13	True	AATAAA	-20	NA	6158546	6166024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6158772_6158852_6159535_6159663_6159784_6162182_6162269_6162358_6162423_6162504_6162573_6162724_6164808_6164883_6164972_6165075_6165169_6165398
ES.17237.3	chr19	+	3244	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	62	-1282	62	1282	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGAGGTTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	6135074	6143089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.4	chr19	+	1947	6	NNC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	177.578602314581	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCAGACTGCTTT	NA	False	NA	30	True	AATAAA	-15	NA	6135076	6141802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140088_6140555_6140677
ES.17237.5	chr19	+	1357	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	71	596	71	-596	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTGCTGTTGACA	NA	False	NA	NA	False	NA	NA	NA	6135083	6141211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.6	chr19	+	2857	5	NIC	ENSMUSG00000024791.11	novel	2024	6	NA	NA	81	2	intron_retention	FALSE	canonical	3	368	junction_4	46.9594239743206	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTGCTTTTTATTTG	NA	False	NA	37	True	AATAAA	-22	NA	6135093	6141809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6135239_6135427_6136498_6136581_6136618_6140080_6140555_6140677
ES.17237.7	chr19	+	2927	7	Fusion	ENSMUSG00000117666.2_ENSMUSG00000024791.11	novel	2024	6	NA	NA	81	-1696	intron_retention	FALSE	canonical	0	0	junction_6	169.712174643489	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGTGTCAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	6135093	6146568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677_6140885_6144661
ES.17237.8	chr19	+	4740	30	Fusion	ENSMUSG00000024791.11_ENSMUSG00000054999.3	novel	2491	18	NA	NA	86	198	intron_retention	FALSE	canonical	0	0	junction_6	167.529002582544	251	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTATTGTTTGGAGATC	NA	False	NA	9	True	AATAAA	-16	NA	6135098	6166020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677_6140817_6143876_6144073_6144661_6145201_6145397_6145497_6145861_6146073_6147683_6147751_6147883_6148005_6155940_6156028_6156115_6156289_6156374_6156497_6156852_6156976_6158487_6158772_6158852_6158958_6159448_6159535_6159663_6159784_6162182_6162269_6162358_6162423_6162504_6162573_6162724_6162817_6162905_6162997_6164471_6164554_6164633_6164808_6164883_6164972_6165075_6165169_6165398
ES.17237.9	chr19	+	1710	8	Fusion	ENSMUSG00000117666.2_ENSMUSG00000024791.11	novel	2024	6	NA	NA	92	-1736	multi-exon	FALSE	canonical	0	0	junction_5	229.239025063895	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6135104	6146528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140123_6144661_6144773_6145102_6145201_6145397
ES.17238.1	chr19	-	1492	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	-21	0	4	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9940	False	NA	0	True	AATAAA	-15	NA	6117893	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ES.17238.10	chr19	-	1740	9	NIC	ENSMUSG00000024799.17	novel	1498	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	76.2721279367503	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9994	False	NA	0	True	AATAAA	-15	NA	6117839	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113132_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6117350_6117698
ES.17238.11	chr19	-	1391	10	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	81.0336007125714	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9932	False	NA	0	True	AATAAA	-15	NA	6117901	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117807
ES.17238.12	chr19	-	1167	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	101.258873067993	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9938	False	NA	0	True	AATAAA	-15	NA	6117895	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117698
ES.17238.13	chr19	-	4773	17	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-6	5020	intron_retention	FALSE	canonical	3	124	junction_14	57.5404409415673	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	981	False	NA	-1	True	AATAAA	-14	NA	6127267	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.14	chr19	-	1386	10	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	81.5340571119566	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9994	False	NA	-1	True	AATAAA	-14	NA	6117839	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116673_6116997_6117053_6117152_6117350_6117698
ES.17238.15	chr19	-	1114	3	ISM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	3577	1	2827	0	intron_retention	FALSE	canonical	3	235	junction_2	23.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	7579	False	NA	-1	True	AATAAA	-14	NA	6114295	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6113104_6113353_6113477_6113556
ES.17238.16	chr19	-	4267	3	NIC	ENSMUSG00000024799.17	novel	1498	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	23	junction_2	131.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	3	True	NA	-1	True	AATAAA	-14	NA	6117848	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6116445_6116528_6117053_6117698
ES.17238.17	chr19	-	1349	10	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.6995155762306	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9964	False	NA	-1	True	AATAAA	-14	NA	6117869	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116606_6116997_6117053_6117152_6117350_6117698
ES.17238.18	chr19	-	2069	8	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	7	0	intron_retention	TRUE	non_canonical	0	0	junction_1	112.496167735181	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	1	True	NA	-1	True	AATAAA	-14	NA	6117850	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113104_6113159_6113638_6113851_6114021_6114108_6114229_6116267_6116445_6116528_6117053_6117152_6117350_6117698
ES.17238.2	chr19	-	5096	16	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	4	5021	intron_retention	FALSE	canonical	3	124	junction_13	58.0436617268989	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	1024	False	NA	0	True	AATAAA	-15	NA	6127224	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.20	chr19	-	1298	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	85.9127464349732	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9964	False	NA	-1	True	AATAAA	-14	NA	6117869	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ES.17238.21	chr19	-	2187	7	NIC	ENSMUSG00000024799.17	novel	1498	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	213	junction_6	26.8741924943285	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	0	True	NA	-1	True	AATAAA	-14	NA	6117851	6112851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113477_6113556_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6117350_6117698
ES.17238.23	chr19	-	1367	10	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	76.3254888416287	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTGTTTTTCTTCTA	9932	False	NA	-3	True	AATAAA	-12	NA	6117901	6112853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
ES.17238.24	chr19	-	979	6	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	2	-121	intron_retention	FALSE	canonical	3	213	junction_5	28.0185652737609	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTCTTTGGAGATCT	9963	False	NA	NA	False	AATACA	-17	NA	6117870	6113972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ES.17238.25	chr19	-	1289	4	NNC	ENSMUSG00000024799.17	novel	718	4	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	126.628064293294	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACAGGATTGAATGAAA	9943	False	NA	NA	False	AATATA	-19	NA	6117890	6115555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6116445_6116528_6116724_6116997_6117053_6117740
ES.17238.26	chr19	-	896	5	FSM	ENSMUSG00000024799.17	ENSMUST00000160354.8	1443	5	-45	592	6	10	multi-exon	FALSE	canonical	3	213	junction_4	26.5988721565408	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCGCGCATTTGGCTTAT	0	True	NA	0	True	TATAAA	-23	NA	6117851	6116148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ES.17238.27	chr19	-	880	5	Fusion	ENSMUSG00000024799.17_ENSMUSG00000024797.15	novel	1443	5	NA	NA	-4	7	multi-exon	FALSE	canonical	2	4	junction_2	111.747483193135	170	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCGCGCGCATTTGGCT	9944	False	NA	-3	True	TATAAA	-20	NA	6117889	6116151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6116445_6116528_6116673_6116997_6117053_6117152_6117350_6117698
ES.17238.28	chr19	-	1008	4	Fusion	ENSMUSG00000024799.17_ENSMUSG00000024797.15	novel	1443	5	NA	NA	-2	2	intron_retention	FALSE	canonical	3	213	junction_3	22.0957512255687	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAGAGCGCGCGCATT	9946	False	NA	-8	True	TATAAA	-15	NA	6117887	6116156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6116724_6116997_6117053_6117152_6117350_6117698
ES.17238.29	chr19	-	1504	3	Fusion	ENSMUSG00000024799.17_ENSMUSG00000024797.15	novel	1443	5	NA	NA	-1	16	intron_retention	FALSE	canonical	3	265	junction_2	10.5	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAACAAGAGGGTTTTT	9947	False	NA	-50	True	NA	NA	NA	6117886	6116198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6116445_6116528_6117053_6117152
ES.17238.3	chr19	-	1763	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_3	32.6410401182315	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9943	False	NA	0	True	AATAAA	-15	NA	6117890	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6117350_6117698
ES.17238.30	chr19	-	2518	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	12	145	12	3	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCCTGCAGGGGCGGG	999	False	NA	0	True	AATAAA	-21	NA	6127249	6118016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.31	chr19	-	3005	8	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	124	junction_5	17.7717960458103	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1000	False	NA	-3	True	AATAAA	-18	NA	6127248	6118019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.32	chr19	-	3424	7	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	127	junction_4	16.8069099546056	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1010	False	NA	-3	True	AATAAA	-18	NA	6127238	6118019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121739_6126392_6126523_6126980
ES.17238.33	chr19	-	2969	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	124	junction_6	16.0735613664178	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1024	False	NA	-3	True	AATAAA	-18	NA	6127224	6118019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.34	chr19	-	4136	3	Fusion	ENSMUSG00000024799.17_ENSMUSG00000024797.15	novel	1826	5	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	141	junction_1	18.5	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	980	False	NA	-4	True	AATAAA	-17	NA	6127268	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6121739_6126392_6126523_6126980
ES.17238.35	chr19	-	2346	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	61.7413961617325	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1017	False	NA	-4	True	AATAAA	-17	NA	6127231	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118472_6118884_6118973_6119055_6119178_6119494_6119714_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.36	chr19	-	3214	6	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	134	junction_3	16.9587735405601	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1023	False	NA	-4	True	AATAAA	-17	NA	6127225	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6121739_6126392_6126523_6126980
ES.17238.37	chr19	-	3100	7	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	8	-1	intron_retention	FALSE	canonical	3	127	junction_4	17.6957308096865	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1028	False	NA	-4	True	AATAAA	-17	NA	6127220	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6121187_6121295_6121739_6126392_6126523_6126980
ES.17238.38	chr19	-	2274	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	50.2405152740296	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1023	False	NA	-4	True	AATAAA	-17	NA	6127225	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.39	chr19	-	2930	8	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	127	junction_5	16.5566436508005	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1024	False	NA	-4	True	AATAAA	-17	NA	6127224	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121739_6126392_6126523_6126980
ES.17238.4	chr19	-	4440	19	NNC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-4	5021	intron_retention	FALSE	canonical	0	0	junction_15	81.2717587199397	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	1011	False	NA	0	True	AATAAA	-15	NA	6127237	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116267_6116445_6116528_6116724_6116997_6117053_6117152_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121352_6121454_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.40	chr19	-	4029	4	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	136	junction_1	18.7320284243028	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1004	False	NA	-4	True	AATAAA	-17	NA	6127244	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118973_6119055_6121739_6126392_6126523_6126980
ES.17238.41	chr19	-	3066	8	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	124	junction_5	18.1265393434993	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	986	False	NA	-4	True	AATAAA	-17	NA	6127262	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.42	chr19	-	2880	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	11	-1	intron_retention	FALSE	canonical	3	124	junction_6	17.2753437013566	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	998	False	NA	-4	True	AATAAA	-17	NA	6127250	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.43	chr19	-	2065	8	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-1894	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	47.0392801555362	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	6626	False	NA	-4	True	AATAAA	-17	NA	6121622	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118472_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591
ES.17238.44	chr19	-	3334	8	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	124	junction_5	17.1832856614342	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTGCCTGCAGGGG	1023	False	NA	-4	True	AATAAA	-17	NA	6127225	6118020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.45	chr19	-	3038	7	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	4	-2	intron_retention	FALSE	canonical	3	134	junction_3	15.5214904782584	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTCTTGCCTGCAGGG	1024	False	NA	-5	True	AATAAA	-16	NA	6127224	6118021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6121739_6126392_6126523_6126980
ES.17238.46	chr19	-	3551	5	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	136	junction_2	16.7182534973005	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTCTTGCCTGCAGG	1001	False	NA	-6	True	AATAAA	-15	NA	6127247	6118022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6121739_6126392_6126523_6126980
ES.17238.47	chr19	-	2322	10	NNC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.3270749460332	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCCTCTTGCCTGCAG	1024	False	NA	-7	True	AATAAA	-14	NA	6127224	6118023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121352_6121591_6121739_6126392_6126523_6126980
ES.17238.48	chr19	-	2558	9	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	8	-4	intron_retention	FALSE	canonical	3	127	junction_6	15.5804364508829	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCCTCTTGCCTGCAG	1028	False	NA	-7	True	AATAAA	-14	NA	6127220	6118023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121739_6126392_6126523_6126980
ES.17238.5	chr19	-	1456	2	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	777	0	intron_retention	FALSE	canonical	2	8	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	5529	False	NA	0	True	AATAAA	-15	NA	6116345	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6114229_6116267
ES.17238.50	chr19	-	2209	9	ISM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	36	909	3	-2	5prime_fragment	FALSE	canonical	3	124	junction_6	16.0735613664178	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTCTCTAGGTCCA	1023	False	NA	NA	False	ATTAAA	-14	NA	6127225	6118780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.51	chr19	-	1384	9	NNC	ENSMUSG00000024792.10	novel	922	8	NA	NA	1	8300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.738734725973	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAAAACATGTTCATAC	6480	False	NA	NA	False	ACTAAA	-14	NA	6134933	6122491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6122548_6130779_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.52	chr19	-	1458	8	Fusion	ENSMUSG00000024797.15_ENSMUSG00000024792.10	novel	784	7	NA	NA	-5	-1	multi-exon	FALSE	canonical	0	0	junction_1	219.471721947712	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTGGTAACTTTTGTTT	6474	False	NA	0	True	ATTAAA	-19	NA	6134939	6125933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6126523_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.53	chr19	-	1868	8	Fusion	ENSMUSG00000024797.15_ENSMUSG00000024792.10	novel	784	7	NA	NA	1	-1	multi-exon	FALSE	canonical	0	0	junction_2	255.477943454688	347	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTGGTAACTTTTGTTT	6480	False	NA	0	True	ATTAAA	-19	NA	6134933	6125933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6126523_6126980_6127509_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6134381_6134492_6134824
ES.17238.54	chr19	-	1211	8	NNC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-3	21	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	231.117074316928	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCGTCTTAGTCCTGT	6465	False	NA	NA	False	AATAAA	-39	NA	6134948	6130770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134453_6134492_6134893
ES.17238.55	chr19	-	1333	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	-32	-14	-19	14	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCATCTCCCGTCTTA	6408	False	NA	NA	False	AATAAA	-32	NA	6135005	6130777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ES.17238.56	chr19	-	1919	8	FSM	ENSMUSG00000024792.10	ENSMUST00000160977.8	922	8	-580	-417	-539	11	multi-exon	FALSE	canonical	3	381	junction_7	88.3658905474556	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTCCATCTCCCGTC	5888	False	NA	NA	False	AATAAA	-29	NA	6135525	6130780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.57	chr19	-	1951	7	NIC	ENSMUSG00000024792.10	novel	922	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	381	junction_6	94.6766426668514	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6474	False	NA	NA	False	AATAAA	-15	NA	6134939	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.58	chr19	-	1747	6	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-6	0	intron_retention	FALSE	canonical	2	5	junction_1	266.081942265912	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6462	False	NA	NA	False	AATAAA	-15	NA	6134951	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131995_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ES.17238.6	chr19	-	3893	19	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	13	5021	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	77.2443013999443	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	1000	False	NA	0	True	AATAAA	-15	NA	6127248	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117807_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ES.17238.60	chr19	-	1898	5	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_3	249.320451427475	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6459	False	NA	NA	False	AATAAA	-15	NA	6134954	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131995_6132210_6132358_6132428_6132809_6134381_6134492_6134893
ES.17238.61	chr19	-	1430	8	NNC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	265.580073631671	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6643	False	NA	NA	False	AATAAA	-15	NA	6134770	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133847_6134091_6134381_6134492_6134675
ES.17238.63	chr19	-	2575	6	NIC	ENSMUSG00000024792.10	novel	922	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	381	junction_5	98.5324312092217	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6459	False	NA	NA	False	AATAAA	-15	NA	6134954	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131245_6131876_6131995_6132210_6132502_6132614_6134091_6134381_6134492_6134824
ES.17238.64	chr19	-	1384	7	NIC	ENSMUSG00000024792.10	novel	922	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	381	junction_6	93.2106336327686	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6480	False	NA	NA	False	AATAAA	-15	NA	6134933	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131245_6131876_6131995_6132210_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.65	chr19	-	1262	8	NNC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	242.006915063962	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6456	False	NA	NA	False	AATAAA	-15	NA	6134957	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132352_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ES.17238.66	chr19	-	1905	7	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	219	junction_6	151.936390198881	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6451	False	NA	NA	False	AATAAA	-15	NA	6134962	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ES.17238.67	chr19	-	3103	6	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	219	junction_5	159.940488932603	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6423	False	NA	NA	False	AATAAA	-15	NA	6134990	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131995_6132210_6132358_6132428_6132502_6132614_6134091_6134381_6134492_6134893
ES.17238.68	chr19	-	1292	8	NNC	ENSMUSG00000024792.10	novel	922	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	220.971694558191	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6480	False	NA	NA	False	AATAAA	-15	NA	6134933	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132337_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ES.17238.69	chr19	-	1238	8	NNC	ENSMUSG00000024792.10	novel	922	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	212.655897196022	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6483	False	NA	NA	False	AATAAA	-15	NA	6134930	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134453_6134492_6134824
ES.17238.7	chr19	-	2085	8	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-4	0	intron_retention	FALSE	canonical	2	8	junction_4	87.4005557354022	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9944	False	NA	0	True	AATAAA	-15	NA	6117889	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116267_6116445_6116528_6117053_6117152_6117350_6117698
ES.17238.70	chr19	-	1356	8	NNC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	234.490763927595	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTCTGAAGCAGCTTT	6449	False	NA	NA	False	AATAAA	-15	NA	6134964	6130794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133897_6134091_6134381_6134492_6134893
ES.17238.71	chr19	-	2516	4	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	219	junction_3	194.861204165654	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCTGAAGCAGCTT	6417	False	NA	NA	False	AATAAA	-14	NA	6134996	6130795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6132502_6132614_6132809_6133978_6134492_6134893
ES.17238.72	chr19	-	3549	1	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-7	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCTGAAGCAGCTT	7069	False	NA	NA	False	AATAAA	-14	NA	6134344	6130795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6130800_6134300
ES.17238.73	chr19	-	1234	8	NNC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	240.308984774322	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTCTGAAGCAGCTT	6468	False	NA	NA	False	AATAAA	-14	NA	6134945	6130795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6131245_6131876_6131995_6132210_6132337_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ES.17238.74	chr19	-	1272	8	NIC	ENSMUSG00000024792.10	novel	1287	8	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	201.730978669866	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACCTTCTGAAGCAGC	6667	False	NA	NA	False	AATAAA	-12	NA	6134746	6130797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134675
ES.17238.8	chr19	-	1282	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	79.8254932649965	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9953	False	NA	0	True	AATAAA	-15	NA	6117880	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117698
ES.17238.9	chr19	-	1450	10	NNC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	82.9865376558076	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9994	False	NA	0	True	AATAAA	-15	NA	6117839	6112850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6113104_6113353_6113489_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ES.17239.1	chr19	-	163	1	Intergenic	novelGene_14350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAGGAACACA	1937	False	NA	NA	False	NA	NA	NA	6139476	6139313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6139300_6139500
ES.1724.1	chr1	-	239	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTAAGCCCTCTATG	NA	False	NA	NA	False	AAAAAG	-34	NA	160750456	160750217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160750200_160750500
ES.17240.1	chr19	-	169	1	Intergenic	novelGene_14351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	6143809	6143640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6143600_6143800
ES.17241.1	chr19	-	4212	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	112	-2882	112	2882	multi-exon	FALSE	canonical	3	283	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTTGTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	6168568	6163147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6166618_6167826
ES.17241.2	chr19	-	3917	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	134	-2609	134	2609	multi-exon	FALSE	canonical	3	283	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTCTTTGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	6168546	6163420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6166618_6167826
ES.17241.3	chr19	-	1356	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	89	-3	89	3	multi-exon	FALSE	canonical	3	283	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAACTTTTAGACTTC	NA	False	NA	-6	True	AATAAA	-28	NA	6168591	6166026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6166618_6167826
ES.17241.4	chr19	-	2481	1	NIC	ENSMUSG00000024790.9	novel	1442	2	NA	NA	166	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACAGGAACTTTT	NA	False	NA	-13	True	AATAAA	-21	NA	6168514	6166033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6166000_6168500
ES.17242.1	chr19	+	160	1	Intergenic	novelGene_14352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATTAAATAAATAAATAAA	1056	False	NA	NA	False	NA	NA	NA	6173016	6173176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6173000_6173200
ES.17243.1	chr19	-	3264	7	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	45	0	intron_retention	FALSE	canonical	3	86	junction_3	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	1	True	NA	NA	NA	6178289	6169428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6173981_6174182_6174219_6178078
ES.17243.2	chr19	-	1602	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	32	1	32	-1	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTCCATTTGCTTATT	NA	False	NA	0	True	NA	NA	NA	6178302	6169429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
ES.17243.3	chr19	-	1796	7	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	39	-2	intron_retention	FALSE	canonical	3	79	junction_5	6.89605362185907	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTCCATTTGCTTAT	NA	False	NA	-1	True	NA	NA	NA	6178295	6169430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6174219_6178078
ES.17243.4	chr19	-	1510	7	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	-28	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	30.1740322499699	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTCCATTTGCTTAT	NA	False	NA	-1	True	NA	NA	NA	6178247	6169430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6178078
ES.17243.6	chr19	-	3358	6	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	86	junction_3	5.45527267879434	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAACCAGGTCCATTTG	NA	False	NA	-6	True	NA	NA	NA	6178188	6169435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6174219_6178078
ES.17243.7	chr19	-	3965	5	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	-45	-7	intron_retention	FALSE	canonical	3	86	junction_2	6.09815545882523	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAACCAGGTCCATTTG	NA	False	NA	-6	True	NA	NA	NA	6178264	6169435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6170774_6171408_6171553_6171812_6171961_6172069_6174219_6178078
ES.17243.8	chr19	-	1213	7	NIC	ENSMUSG00000024787.15	novel	1635	8	NA	NA	51	118	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	30.1740322499699	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGCAAAGACTTCTC	NA	False	NA	NA	False	NA	NA	NA	6178283	6169763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6178078
ES.17243.9	chr19	-	2983	2	Genic_Genomic	ENSMUSG00000024787.15	novel	1635	8	NA	NA	51	-3203	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCGCCAATTAAAAAAAAAT	NA	False	NA	NA	False	AAAAAG	-10	NA	6178283	6175137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_6175572_6175734
ES.17244.1	chr19	-	1281	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	7	-2	7	2	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGAGCCATTTGTGAGT	NA	False	NA	-6	True	AATAAA	-20	NA	6191571	6184410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ES.17244.10	chr19	-	1606	4	NNC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	96	312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	369.110642852068	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTGTCTGGACCAAAA	NA	False	NA	-16	True	NA	NA	NA	6191074	6187187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6187333_6187507_6187671_6187759_6187906_6189922
ES.17244.2	chr19	-	2302	4	FSM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	-8	11	-8	1	multi-exon	FALSE	canonical	3	648	junction_1	55.8091987638836	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGCCATTTGT	NA	False	NA	-10	True	AATAAA	-16	NA	6191178	6184414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6184832_6186008_6187671_6187759_6187871_6191066
ES.17244.3	chr19	-	2187	5	NNC	ENSMUSG00000024944.7	novel	1286	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	315.493264587376	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGGCTGAGCCATTT	NA	False	NA	-12	True	AATAAA	-14	NA	6191171	6184416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6184832_6186008_6186504_6186609_6187671_6187759_6187871_6191066
ES.17244.4	chr19	-	3486	3	NIC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	728	junction_2	28	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCTGGCTGAGCCATT	NA	False	NA	-13	True	AATAAA	-13	NA	6191188	6184417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6187671_6187759_6187871_6191066
ES.17244.5	chr19	-	3334	4	NNC	ENSMUSG00000024944.7	novel	2305	4	NA	NA	25	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	357.114360767901	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTTCCTGGCTGAGCC	NA	False	NA	-16	True	AATAAA	-10	NA	6191145	6184420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6186504_6186609_6187671_6187759_6187871_6191066
ES.17244.6	chr19	-	751	4	NNC	ENSMUSG00000024944.7	novel	1286	5	NA	NA	6	-1528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.114360767901	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTGTTTCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	6191164	6185943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6186323_6187507_6187671_6187759_6187871_6191066
ES.17244.7	chr19	-	1042	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	35	2405	35	691	5prime_fragment	FALSE	canonical	3	728	junction_2	28	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCTGCTAGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	6191135	6186808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6187671_6187759_6187871_6191066
ES.17244.8	chr19	-	906	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	-15	2591	-15	505	5prime_fragment	FALSE	canonical	3	728	junction_2	28	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGGCTTCTGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	6191185	6186994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6187671_6187759_6187871_6191066
ES.17244.9	chr19	-	701	3	ISM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	1	2780	1	316	5prime_fragment	FALSE	canonical	3	728	junction_2	28	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTCTGGACCAAAAGACT	NA	False	NA	-12	True	NA	NA	NA	6191169	6187183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6187671_6187759_6187871_6191066
ES.17245.1	chr19	-	126	1	Intergenic	novelGene_14353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAAGAAGAG	NA	False	NA	NA	False	AATAAA	-6	NA	6193630	6193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6193500_6193600
ES.17246.1	chr19	+	181	1	Intergenic	novelGene_14354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	6198248	6198429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6198200_6198400
ES.17247.1	chr19	+	175	1	Intergenic	novelGene_14355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATTAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	6210446	6210621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6210400_6210600
ES.17248.1	chr19	+	1393	4	NNC	ENSMUSG00000039699.15	novel	857	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.816496580927726	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTGTATGTATATGT	NA	False	NA	NA	False	AATAAA	-19	NA	6214528	6222503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6214584_6215133_6215199_6216497_6216603_6221335
ES.17249.1	chr19	+	1465	9	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-62	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.1370512118101	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTGAGGTTTAAGCCT	7976	False	NA	15	True	AATAAA	-31	NA	6234355	6274260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
ES.17249.2	chr19	+	1580	10	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-52	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.54062594260057	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTGAGGTTTAAGCC	7986	False	NA	14	True	AATAAA	-30	NA	6234365	6274259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
ES.17249.3	chr19	+	1598	7	NNC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.54247233265651	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTCTACTGCCCTGA	7996	False	NA	4	True	AATAAA	-20	NA	6234375	6274249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6234613_6256247_6256294_6261633_6261710_6264881_6265240_6271702_6271776_6272677_6272787_6273550
ES.17249.4	chr19	+	1741	10	NNC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-40	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	6.43102050155013	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGGTTTAAGCCTTT	7998	False	NA	17	True	AATAAA	-33	NA	6234377	6274262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263229_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
ES.17249.5	chr19	+	153	1	Intergenic	novelGene_14357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAGGAAGGAAGGAA	NA	False	NA	6	True	AATAAA	-10	NA	6261404	6261557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6261400_6261600
ES.1725.1	chr1	-	1419	1	FSM	ENSMUSG00000103680.2	ENSMUST00000194570.2	837	1	-1373	791	-1373	-791	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCATTTGAACAATGGC	NA	False	NA	NA	False	NA	NA	NA	160830788	160829369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160829400_160830800
ES.1725.2	chr1	-	4878	1	ISM	ENSMUSG00000043467.20	ENSMUST00000162226.9	18814	5	27049	1	26459	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATCTCTGTCTTTAT	7278	False	NA	-5	True	AATAAA	-16	NA	160835370	160830492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160830500_160835400
ES.1725.3	chr1	-	1831	1	ISM	ENSMUSG00000043467.20	ENSMUST00000162226.9	18814	5	29161	936	28571	-936	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAACAAAAACAAAA	9390	False	NA	NA	False	NA	NA	NA	160833258	160831427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160831400_160833300
ES.17250.1	chr19	-	171	1	Intergenic	novelGene_14356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGGTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	6253098	6252927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6252900_6253100
ES.17251.1	chr19	-	3727	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	48	-1033	19	1033	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGCTTCTGGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	6285854	6276761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.11	chr19	-	2356	14	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	30.6883552496545	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285887	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6284761_6285541
ES.17251.12	chr19	-	2243	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	32.3985596387658	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285872	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6285541
ES.17251.14	chr19	-	2082	14	NNC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-348	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.1685625260587	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6286250	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6284761_6286178
ES.17251.15	chr19	-	3125	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	82	junction_10	13.7830411093569	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285877	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.16	chr19	-	3814	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	82	junction_10	13.456720749623	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285882	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.18	chr19	-	2671	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	9	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	31.2805406318724	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAAGCATTGCTTGCT	NA	False	NA	-8	True	AATAAA	-6	NA	6285893	6277802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.3	chr19	-	3208	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-401	0	intron_retention	FALSE	canonical	3	82	junction_10	13.7868193898698	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6286303	6277794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.4	chr19	-	2995	15	NNC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-412	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.0819459042755	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6286314	6277794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541_6286119_6286277
ES.17251.5	chr19	-	5236	10	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	98	junction_4	9.3571125650788	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6285872	6277794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280467_6280531_6280586_6280936_6281046_6281145_6282431_6282557_6282651_6282796_6284004_6284662
ES.17251.6	chr19	-	3775	10	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	1212	-1	intron_retention	FALSE	canonical	3	82	junction_9	13.1571695706604	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGCTTGCTTTATTGA	NA	False	NA	-1	True	AATAAA	-13	NA	6284661	6277795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280467_6280531_6280586_6280936_6281046_6281145_6282431_6282557_6282651_6282796_6282899_6283806
ES.17251.7	chr19	-	2895	12	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	82	junction_9	12.6091925013932	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285882	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17251.9	chr19	-	2667	13	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.221779211514	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGCTTGCTTTATTG	NA	False	NA	-2	True	AATAAA	-12	NA	6285880	6277796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ES.17252.1	chr19	+	7134	40	FSM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	-753	-10	-753	10	multi-exon	TRUE	canonical	3	75	junction_9	16.8787297726361	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTCTAAGCCTTGATC	8191	False	NA	65	True	NA	NA	NA	6290944	6312375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.10	chr19	+	6329	40	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	23	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	23.2158213073404	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGTCCAGGTCCTCTG	8967	False	NA	20	True	AATAAA	-20	NA	6291720	6312330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.11	chr19	+	7051	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	23	3	intron_retention	FALSE	canonical	0	0	junction_11	24.2984815366341	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCACGTCCAGGTCCTC	8967	False	NA	18	True	AATAAA	-18	NA	6291720	6312328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299803_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.12	chr19	+	6669	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	23	5	intron_retention	FALSE	canonical	2	7	junction_23	23.46182140653	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGTCCAGGTCCTCTG	8967	False	NA	20	True	AATAAA	-20	NA	6291720	6312330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.13	chr19	+	6528	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	29	4	intron_retention	FALSE	canonical	2	7	junction_22	23.4727548789367	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	8973	False	NA	19	True	AATAAA	-19	NA	6291726	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.16	chr19	+	6172	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.8414304923933	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	8984	False	NA	14	True	AATAAA	-14	NA	6291737	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305302_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307451_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.17	chr19	+	3303	18	ISM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	42	10033	42	7	5prime_fragment	FALSE	canonical	3	75	junction_9	12.0109523260459	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGCACGTGGTGCAAA	8986	False	NA	NA	False	NA	NA	NA	6291739	6302332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735
ES.17252.18	chr19	+	6375	41	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_37	31.60410376834	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	8989	False	NA	14	True	AATAAA	-14	NA	6291742	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6309173_6309248_6310018_6310174_6311401_6311555_6311630
ES.17252.19	chr19	+	6369	39	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	45	0	intron_retention	FALSE	canonical	3	75	junction_9	17.071647130083	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	8989	False	NA	15	True	AATAAA	-15	NA	6291742	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.2	chr19	+	6671	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	-142	4	intron_retention	FALSE	canonical	3	12	junction_16	22.811418266388	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	8802	False	NA	19	True	AATAAA	-19	NA	6291555	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301747_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.20	chr19	+	2989	19	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	50	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.1406404938943	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACGTGGTGCAAACCTCCA	8994	False	NA	NA	False	NA	NA	NA	6291747	6302338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294722_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302199
ES.17252.23	chr19	+	6276	40	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	53	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	23.5913042961976	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	8997	False	NA	19	True	AATAAA	-19	NA	6291750	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306587_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.24	chr19	+	6599	38	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	intron_retention	FALSE	canonical	2	7	junction_21	23.5588565602223	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	9000	False	NA	15	True	AATAAA	-15	NA	6291753	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.25	chr19	+	2964	19	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	33.0495792916948	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGAAGCACGTG	9000	False	NA	NA	False	NA	NA	NA	6291753	6302325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301747_6301894_6302199
ES.17252.26	chr19	+	6296	40	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	23.8907220677912	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACGTCCAGGTCCTCTG	9000	False	NA	20	True	AATAAA	-20	NA	6291753	6312330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301719_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.27	chr19	+	8186	31	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	intron_retention	FALSE	canonical	3	75	junction_9	17.3697054283217	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	9000	False	NA	15	True	AATAAA	-15	NA	6291753	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301894_6302456_6302914_6303017_6303099_6303363_6304697_6305130_6305296_6305438_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.28	chr19	+	6128	39	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	24.047290089838	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTACCTGTGAGACC	9000	False	NA	33	True	AATAAA	-33	NA	6291753	6312343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.29	chr19	+	6351	38	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	intron_retention	FALSE	canonical	0	0	junction_28	28.1746354075899	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	9000	False	NA	15	True	AATAAA	-15	NA	6291753	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305302_6305438_6305569_6305648_6305858_6306197_6306407_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.3	chr19	+	6343	40	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	22.3891821346849	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTCCAGGTCCTCTGTA	8945	False	NA	22	True	AATAAA	-22	NA	6291698	6312332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305302_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.30	chr19	+	6386	39	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	57	0	intron_retention	FALSE	canonical	3	75	junction_9	17.0987031955505	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	9001	False	NA	15	True	AATAAA	-15	NA	6291754	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.33	chr19	+	6201	41	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	202	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_37	28.0343427780999	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGGCCACGTCCAGG	9146	False	NA	13	True	AATAAA	-13	NA	6291899	6312323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6309173_6309248_6310018_6310174_6311401_6311555_6311630
ES.17252.34	chr19	+	6368	40	NNC	ENSMUSG00000024773.16	novel	5613	36	NA	NA	917	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.095907427748	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	9861	False	NA	19	True	AATAAA	-19	NA	6292614	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6292947_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.36	chr19	+	6025	36	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	-719	-1	intron_retention	FALSE	canonical	3	75	junction_7	17.2798337104622	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	339	False	NA	14	True	AATAAA	-14	NA	6294775	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.37	chr19	+	5548	35	NIC	ENSMUSG00000024773.16	novel	5613	36	NA	NA	161	0	intron_retention	FALSE	canonical	3	75	junction_5	17.3574271370099	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	1219	False	NA	15	True	AATAAA	-15	NA	6295655	6312325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.38	chr19	+	5388	35	ISM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	4630	36	833	4	3prime_fragment	FALSE	canonical	3	75	junction_4	17.7804760543615	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	1891	False	NA	19	True	AATAAA	-19	NA	6296327	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.39	chr19	+	4777	31	ISM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	6220	78	2423	-38	3prime_fragment	FALSE	canonical	3	80	junction_17	17.730106222656	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTGCATGAAGTGGAA	4	True	NA	-23	True	NA	NA	NA	6297917	6312287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.4	chr19	+	6848	38	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_25	29.237622480257	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	8948	False	NA	14	True	AATAAA	-14	NA	6291701	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6305569_6305696_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311408_6311555_6311630
ES.17252.40	chr19	+	4387	29	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	-1464	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.6222260065073	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	277	False	NA	14	True	AATAAA	-14	NA	6300053	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6300298_6300442_6300540_6300625_6300786_6301099_6301145_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.41	chr19	+	3905	24	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	-175	-5	intron_retention	FALSE	canonical	3	12	junction_2	27.8059030057643	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGTCTGCCCCACTCT	1566	False	NA	50	True	NA	NA	NA	6301342	6312360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6301432_6301517_6301634_6301747_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.42	chr19	+	3107	21	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	1063	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	36.4134590501919	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCACGTCCAGGT	2804	False	NA	14	True	AATAAA	-14	NA	6302580	6312324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.43	chr19	+	1585	9	NNC	ENSMUSG00000024773.16	novel	5613	36	NA	NA	236	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.7230241763008	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGTCCAGGTCCTCT	1168	False	NA	19	True	AATAAA	-19	NA	6308052	6312329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6309718_6309864_6310018_6310174_6311401_6311555_6311630
ES.17252.5	chr19	+	7918	30	NIC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	5	-2	intron_retention	FALSE	canonical	3	75	junction_7	17.0950340815601	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCAGGCCACGTCCAGG	8949	False	NA	13	True	AATAAA	-13	NA	6291702	6312323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6291997_6294456_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.6	chr19	+	6313	40	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_17	22.554193628461	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCACGTCCAGGTCCT	8952	False	NA	17	True	AATAAA	-17	NA	6291705	6312327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301747_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.7	chr19	+	6757	38	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	21	8	intron_retention	TRUE	canonical	2	7	junction_22	23.7705429973753	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTCCAGGTCCTCTGTAC	8965	False	NA	23	True	AATAAA	-23	NA	6291718	6312333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303647_6304372_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17252.8	chr19	+	6441	39	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	21	3	intron_retention	FALSE	canonical	0	0	junction_19	24.2830150505368	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCACGTCCAGGTCCTC	8965	False	NA	18	True	AATAAA	-18	NA	6291718	6312328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302685_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ES.17253.1	chr19	-	2860	10	Antisense	novelGene_ENSMUSG00000024773.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACACCCAGATGTTGGA	9574	False	NA	NA	False	NA	NA	NA	6298266	6293075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_6294618_6294714_6294867_6295073_6295177_6295486_6295722_6296331_6296429_6296515_6296679_6296780_6296922_6297667_6297906_6297991_6298139_6298224
ES.17254.1	chr19	+	1911	1	FSM	ENSMUSG00000065523.3	ENSMUST00000083589.3	89	1	-127	-1695	-127	1695	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTCATTTTGTCTTTTT	7862	False	NA	NA	False	NA	NA	NA	6314746	6316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6314700_6316700
ES.17255.1	chr19	-	177	1	Intergenic	novelGene_14358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGTAG	NA	False	NA	NA	False	NA	NA	NA	6316239	6316062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6316100_6316200
ES.17256.1	chr19	+	2215	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-53	1191	-53	545	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGCCTCTTCTGTCTG	NA	False	NA	24	True	AATATA	-21	NA	6326701	6348935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ES.17256.2	chr19	+	3383	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-30	0	-30	0	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATGCTCCCTTGTCTTT	NA	False	NA	16	True	ATTAAA	-24	NA	6326724	6350126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ES.17256.3	chr19	+	2059	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-29	1323	-29	413	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACCATCTTTCTTTT	NA	False	NA	24	True	CATAAA	-34	NA	6326725	6348803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ES.17256.4	chr19	+	3722	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	-1	8	-1	-8	intron_retention	FALSE	canonical	3	357	junction_1	32.4448249597169	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTCTCATGCTCCC	NA	False	NA	8	True	ATTAAA	-16	NA	6326753	6350118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562
ES.17256.5	chr19	+	1686	6	NNC	ENSMUSG00000024772.10	novel	3353	5	NA	NA	-65	399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.142334553518	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTTGAATAGGAAAACC	NA	False	NA	10	True	CATAAA	-20	NA	6326889	6348789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103_6348212_6348406
ES.17256.6	chr19	+	2457	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	141	755	-59	-755	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTCTCCTCTTTC	NA	False	NA	21	True	NA	NA	NA	6326895	6349371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ES.17256.7	chr19	+	1593	4	NIC	ENSMUSG00000024772.10	novel	3353	5	NA	NA	-45	544	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	193.828675782392	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGCCTCTTCTGTCT	NA	False	NA	23	True	AATATA	-20	NA	6326909	6348934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6327409_6331247_6331346_6347562_6347728_6348103
ES.17256.8	chr19	+	1762	6	NNC	ENSMUSG00000024772.10	novel	3353	5	NA	NA	-2	538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.142334553518	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTTCTTGCCTCTT	NA	False	NA	17	True	AATATA	-14	NA	6326952	6348928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103_6348212_6348406
ES.17257.1	chr19	+	4722	37	NNC	ENSMUSG00000024769.8	novel	310	2	NA	NA	-239	1284	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.95221787153807	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGGGGCCAAACATAG	9828	False	NA	NA	False	ATTAAA	-24	NA	6356246	6373546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6356310_6359155_6359248_6359328_6359413_6359756_6359853_6360247_6360397_6360824_6360919_6361051_6361253_6361351_6361601_6362147_6362228_6363248_6363347_6363444_6363526_6363718_6363826_6363920_6364101_6364314_6364396_6364525_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372825_6372912_6373323
ES.17257.11	chr19	+	3604	20	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-6740	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.53238621588558	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	474	False	NA	6	True	AATAAA	-16	NA	6365097	6375680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366373_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.12	chr19	+	4444	18	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-6619	-1	intron_retention	FALSE	canonical	1	1	junction_4	7.78473352945157	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCCCTGCCTAGGT	595	False	NA	7	True	AATAAA	-17	NA	6365218	6375681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366373_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.13	chr19	+	3161	15	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-5273	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.88177955664784	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	1941	False	NA	6	True	AATAAA	-16	NA	6366564	6375680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371791_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.14	chr19	+	3559	11	NIC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-4434	13	intron_retention	FALSE	canonical	3	10	junction_3	7.05761999543756	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGGTCTGTCTTGCTGTGC	2780	False	NA	21	True	AATAAA	-31	NA	6367403	6375695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6367545_6367633_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.15	chr19	+	2406	6	NIC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-1308	-6	intron_retention	FALSE	canonical	3	12	junction_4	7.81280999384984	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGGCTTCCCTGCC	5906	False	NA	2	True	AATAAA	-12	NA	6370529	6375676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6370873_6371686_6371785_6371856_6372178_6372283_6372709_6372822_6372912_6374546
ES.17257.16	chr19	+	1842	6	NIC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	-152	-2	intron_retention	FALSE	canonical	3	12	junction_1	8.41427358718505	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	7062	False	NA	6	True	AATAAA	-16	NA	6371685	6375680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.2	chr19	+	6199	37	FSM	ENSMUSG00000024769.8	ENSMUST00000025681.8	5995	37	-201	-3	-201	3	multi-exon	FALSE	canonical	1	1	junction_14	6.99001713203715	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTGCCTAGGTCTGT	9866	False	NA	11	True	AATAAA	-21	NA	6356284	6375685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6356906_6359155_6359248_6359328_6359413_6359756_6359853_6360247_6360397_6360824_6360919_6361051_6361253_6361351_6361601_6362147_6362228_6363248_6363347_6363444_6363526_6363718_6363826_6363920_6364101_6364314_6364396_6364525_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.3	chr19	+	3657	1	Genic_Genomic	ENSMUSG00000024769.8	novel	NA	NA	NA	NA	-15	-12135	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTAGCCTCAGGGATGC	NA	False	NA	NA	False	NA	NA	NA	6356470	6360127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_6356500_6360100
ES.17257.4	chr19	+	5944	37	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	155	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.08393243653778	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	NA	False	NA	6	True	AATAAA	-16	NA	6356640	6375680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6356906_6359155_6359248_6359328_6359413_6359756_6359853_6360247_6360503_6360824_6360919_6361051_6361253_6361351_6361601_6362147_6362228_6363248_6363347_6363444_6363526_6363718_6363826_6363920_6364101_6364314_6364396_6364525_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17257.7	chr19	+	5114	31	NNC	ENSMUSG00000024769.8	novel	310	2	NA	NA	3912	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.4874710164529	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTTCCCTGCCTAGG	NA	False	NA	6	True	AATAAA	-16	NA	6360397	6375680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6360503_6360824_6360919_6361051_6361253_6361351_6361601_6362147_6362228_6363248_6363347_6363444_6363526_6363718_6363826_6363920_6364101_6364314_6364396_6364525_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6366368_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372825_6372912_6374546
ES.17257.8	chr19	+	4621	27	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	6796	-3	intron_retention	FALSE	canonical	1	4	junction_1	7.00686476579603	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTTCCCTGCCTAG	NA	False	NA	5	True	AATAAA	-15	NA	6363281	6375679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6363347_6363444_6363526_6363718_6363826_6363920_6364101_6364314_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365818_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372825_6372912_6374546
ES.17257.9	chr19	+	4198	25	NNC	ENSMUSG00000024769.8	novel	5995	37	NA	NA	7448	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.39322136975637	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGCTTCCCTGCCTA	15	True	NA	4	True	AATAAA	-14	NA	6363933	6375678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6364101_6364314_6364396_6364525_6364648_6364734_6364811_6365019_6365127_6365201_6365317_6365668_6365789_6365893_6365983_6366228_6366282_6366370_6366470_6366548_6366609_6366858_6366965_6367190_6367325_6367404_6367545_6367633_6367716_6368387_6368605_6370108_6370172_6370272_6370873_6371686_6371785_6371856_6371942_6372056_6372178_6372283_6372402_6372584_6372709_6372822_6372912_6374546
ES.17258.1	chr19	+	323	2	Intergenic	novelGene_14359	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAAACAAAAAAACAAC	1245	False	NA	NA	False	NA	NA	NA	6377793	6378291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6377861_6378035
ES.17258.2	chr19	+	178	1	Intergenic	novelGene_14360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACAAGCC	1417	False	NA	NA	False	NA	NA	NA	6377965	6378143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6378000_6378100
ES.17259.1	chr19	+	180	1	Intergenic	novelGene_14361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTCAAATTTTCCA	2204	False	NA	NA	False	NA	NA	NA	6378752	6378932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6378800_6378900
ES.1726.1	chr1	+	2012	1	Antisense	novelGene_ENSMUSG00000043467.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAATATCC	NA	False	NA	NA	False	NA	NA	NA	160847889	160849901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_160847900_160849900
ES.1726.2	chr1	+	3871	3	Antisense	novelGene_ENSMUSG00000043467.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	160847889	160856126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_160849738_160854033_160854786_160854855
ES.1726.3	chr1	+	168	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	160848423	160848591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_160848400_160848600
ES.1726.4	chr1	+	1850	2	Antisense	novelGene_ENSMUSG00000043467.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	160852017	160855808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_160853765_160855705
ES.17260.1	chr19	+	2826	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	-187	0	-153	0	multi-exon	TRUE	canonical	3	89	junction_1	99.9901229690114	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	401	False	NA	21	True	GATAAA	-21	NA	6384855	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.10	chr19	+	3370	8	NIC	ENSMUSG00000024947.18	novel	2975	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	360	junction_3	17.111876768216	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	625	False	NA	21	True	GATAAA	-21	NA	6385079	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388992_6389368_6389534_6389716
ES.17260.11	chr19	+	3673	6	NIC	ENSMUSG00000024947.18	novel	3002	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	66	junction_1	130.844334993916	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	625	False	NA	21	True	GATAAA	-21	NA	6385079	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385101_6385474_6385936_6386754_6387312_6387508_6387719_6388312_6389534_6389716
ES.17260.12	chr19	+	3180	8	NIC	ENSMUSG00000024947.18	novel	2975	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	360	junction_2	28.662711323393	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	628	False	NA	21	True	GATAAA	-21	NA	6385082	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385936_6386754_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.13	chr19	+	2554	10	NNC	ENSMUSG00000024947.18	novel	2639	10	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_6	150.365480672187	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	632	False	NA	21	True	GATAAA	-21	NA	6385086	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387739_6388373_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.14	chr19	+	2840	10	NNC	ENSMUSG00000024947.18	novel	2652	10	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_9	127.242550535058	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	633	False	NA	12	True	GATAAA	-12	NA	6385087	6390910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716_6390592_6390698
ES.17260.15	chr19	+	2971	9	FSM	ENSMUSG00000024947.18	ENSMUST00000113503.10	1851	9	-403	-717	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	133.41423977597	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	633	False	NA	21	True	GATAAA	-21	NA	6385087	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6385951_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.18	chr19	+	3538	7	NIC	ENSMUSG00000024947.18	novel	2975	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	367	junction_3	13.5236418500672	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	654	False	NA	21	True	GATAAA	-21	NA	6385108	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385936_6386754_6386964_6387182_6387550_6387630_6387719_6388312_6388992_6389368_6389534_6389716
ES.17260.19	chr19	+	4653	2	NIC	ENSMUSG00000024947.18	novel	2738	8	NA	NA	-11	0	intron_retention	TRUE	canonical	0	0	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	675	False	NA	21	True	GATAAA	-21	NA	6385129	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6387719_6388855
ES.17260.2	chr19	+	2662	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	-1	2	-1	0	multi-exon	FALSE	canonical	3	66	junction_1	106.997403914508	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	553	False	NA	21	True	GATAAA	-21	NA	6385007	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.21	chr19	+	2789	9	NNC	ENSMUSG00000024947.18	novel	2652	10	NA	NA	75	0	intron_retention	FALSE	non_canonical	0	0	junction_6	129.500965247368	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	761	False	NA	12	True	GATAAA	-12	NA	6385215	6390910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388885_6388992_6389368_6389534_6389716
ES.17260.4	chr19	+	2985	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	-8	-2	-8	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	606	False	NA	23	True	GATAAA	-23	NA	6385060	6390921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17260.5	chr19	+	2442	9	NIC	ENSMUSG00000024947.18	novel	2663	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	9	junction_8	158.644059138689	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	608	False	NA	21	True	GATAAA	-21	NA	6385062	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389716
ES.17260.6	chr19	+	2436	9	NIC	ENSMUSG00000024947.18	novel	2639	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	9	junction_8	154.397569200425	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAAAAGAGAGATGT	615	False	NA	10	True	GATAAA	-10	NA	6385069	6390908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389716
ES.17260.8	chr19	+	3832	6	NIC	ENSMUSG00000024947.18	novel	3002	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	360	junction_3	17.239489551608	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	621	False	NA	21	True	GATAAA	-21	NA	6385075	6390919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387719_6388312_6389534_6389716
ES.17260.9	chr19	+	2801	9	NIC	ENSMUSG00000024947.18	novel	2652	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	66	junction_1	112.3364783808	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	624	False	NA	12	True	GATAAA	-12	NA	6385078	6390910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6385101_6385474_6385936_6386754_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ES.17261.1	chr19	+	2991	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	-91	1744	-66	3	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGTCTCTCTGAGGTA	1300	False	NA	13	True	ATTAAA	-17	NA	6391098	6403901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.10	chr19	+	3417	28	NNC	ENSMUSG00000024948.16	novel	2875	31	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	8.50707766335599	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTAGTCTCTCTGAG	1440	False	NA	10	True	ATTAAA	-14	NA	6391238	6403898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6391376_6391488_6391547_6391796_6391998_6392284_6392341_6392639_6392688_6392773_6393207_6393284_6393429_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6403221_6403307_6403364_6403469
ES.17261.11	chr19	+	3313	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	49	1282	1	465	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAGAGGGGGATGTGAG	1440	False	NA	NA	False	AATACA	-18	NA	6391238	6404363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.12	chr19	+	3116	31	NIC	ENSMUSG00000024948.16	novel	4644	32	NA	NA	2	-1	intron_retention	FALSE	canonical	3	17	junction_1	5.49959594475408	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCACTAGTCTCTCTGA	1449	False	NA	9	True	ATTAAA	-13	NA	6391247	6403897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.13	chr19	+	4471	31	FSM	ENSMUSG00000024948.16	ENSMUST00000123468.9	2875	31	-20	-1576	6	2	multi-exon	FALSE	canonical	3	17	junction_1	5.4793551932078	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACCTGGATGGTTTTTT	1461	False	NA	NA	False	NA	NA	NA	6391259	6405474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6391376_6391488_6391547_6391773_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.14	chr19	+	3881	29	NIC	ENSMUSG00000024948.16	novel	2875	31	NA	NA	13	6	intron_retention	FALSE	canonical	3	17	junction_1	5.5616902070489	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTCTCTGAGGTAGAG	1468	False	NA	16	True	ATTAAA	-20	NA	6391266	6403904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6391376_6391488_6391547_6391773_6391998_6392284_6392341_6392639_6392688_6392773_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.16	chr19	+	3687	21	NIC	ENSMUSG00000024948.16	novel	2875	31	NA	NA	234	8	intron_retention	FALSE	canonical	0	0	junction_1	8.86270274803347	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTCTGAGGTAGAGGA	3002	False	NA	18	True	ATTAAA	-22	NA	6392800	6403906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6393554_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6402683_6402804_6402892_6403149_6403221_6403290_6403364_6403469
ES.17261.17	chr19	+	3459	10	NIC	ENSMUSG00000024948.16	novel	5086	29	NA	NA	-158	-2	intron_retention	FALSE	canonical	3	24	junction_3	5.45237517617124	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCTACTCTGTTTGTG	2390	False	NA	NA	False	NA	NA	NA	6396270	6405640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6403221_6403307_6403364_6403469
ES.17261.18	chr19	+	2410	1	NIC	ENSMUSG00000024948.16	novel	5086	29	NA	NA	-1396	35	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTATGAGCACTTGG	792	False	NA	NA	False	NA	NA	NA	6399542	6401952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6399500_6402000
ES.17261.19	chr19	+	2017	1	Genic_Genomic	ENSMUSG00000024948.16	novel	NA	NA	NA	NA	2109	1285	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAGAGGAGGATCCAT	3218	False	NA	NA	False	NA	NA	NA	6404913	6406930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_6404900_6406900
ES.17261.2	chr19	+	3241	30	NIC	ENSMUSG00000024948.16	novel	2875	31	NA	NA	8	1	intron_retention	FALSE	canonical	3	17	junction_1	5.57043324311963	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTAGTCTCTCTGAGG	1374	False	NA	11	True	ATTAAA	-15	NA	6391172	6403899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6391376_6391488_6391547_6391773_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6403221_6403307_6403364_6403469
ES.17261.3	chr19	+	2909	32	NNC	ENSMUSG00000024948.16	novel	4644	32	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	7.95944454998116	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTAGTCTCTCTGAG	1382	False	NA	10	True	ATTAAA	-14	NA	6391180	6403898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396030_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396848_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.4	chr19	+	4606	32	NIC	ENSMUSG00000024948.16	novel	4644	32	NA	NA	14	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	6.74262999972677	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTTTGTGAGGATCAA	1405	False	NA	NA	False	NA	NA	NA	6391203	6405648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393517_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.5	chr19	+	3122	31	NIC	ENSMUSG00000024948.16	novel	4644	32	NA	NA	15	5	intron_retention	FALSE	canonical	1	1	junction_2	6.87257027772159	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTCTCTCTGAGGTAGA	1406	False	NA	15	True	ATTAAA	-19	NA	6391204	6403903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6391376_6391488_6391547_6391796_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6403221_6403307_6403364_6403469
ES.17261.7	chr19	+	4603	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	44	-3	-4	3	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTTTGTGAGGATCAA	1435	False	NA	NA	False	NA	NA	NA	6391233	6405648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17261.8	chr19	+	2822	32	FSM	ENSMUSG00000024948.16	ENSMUST00000124556.8	4256	32	1	1433	1	0	multi-exon	FALSE	canonical	1	1	junction_2	6.76512449769425	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTAGTCTCTCTGAG	1440	False	NA	10	True	ATTAAA	-14	NA	6391238	6403898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6391376_6391488_6391547_6391799_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ES.17262.1	chr19	+	3746	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	-218	825	-218	2	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCTTTTCTTTTAAAAC	384	False	NA	24	True	AATAAA	-24	NA	6413501	6427235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.101	chr19	+	3239	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	41	-3	intron_retention	FALSE	canonical	0	0	junction_1	489.516335841365	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	1510	False	NA	18	True	AATAAA	-18	NA	6414627	6427229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414800_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424583_6424639_6424748_6424929_6425687
ES.17262.102	chr19	+	3192	13	NIC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	48	0	intron_retention	FALSE	canonical	3	30	junction_1	341.11706812569	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	1517	False	NA	15	True	AATAAA	-15	NA	6414634	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.103	chr19	+	4083	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	55	1	intron_retention	FALSE	canonical	0	0	junction_1	348.508757661363	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCATCCTCTGGTCTT	1524	False	NA	23	True	AATAAA	-15	NA	6414641	6428061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414800_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.104	chr19	+	2525	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	458.697151058178	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	1526	False	NA	16	True	AATAAA	-16	NA	6414643	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.105	chr19	+	3078	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	58	0	intron_retention	FALSE	canonical	0	0	junction_11	441.81597319095	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	1527	False	NA	15	True	AATAAA	-15	NA	6414644	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424852_6424929_6425687
ES.17262.106	chr19	+	3400	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	97	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	386.573291527263	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGCCATCCTCTGGT	1566	False	NA	20	True	AATAAA	-12	NA	6414683	6428058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414800_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.108	chr19	+	4611	11	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	2161	0	intron_retention	FALSE	canonical	3	98	junction_8	344.304167851625	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	3630	False	NA	15	True	AATAAA	-15	NA	6416747	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.109	chr19	+	1781	11	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-1758	254	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_7	352.417139197287	1302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGAGTTGGTCTCTTAT	5273	False	NA	39	True	AATATA	-11	NA	6418390	6426064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.110	chr19	+	4795	11	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-1155	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	443.508748504469	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	222	False	NA	14	True	AATAAA	-14	NA	6418993	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687_6426104_6426490
ES.17262.111	chr19	+	5340	9	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-355	-1	intron_retention	FALSE	canonical	0	0	junction_3	468.521877824291	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	1022	False	NA	14	True	AATAAA	-14	NA	6419793	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6421450_6421647_6421738_6422054_6422241_6422330_6422451_6422547_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.112	chr19	+	4813	10	ISM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	6483	0	54	0	3prime_fragment	FALSE	canonical	3	714	junction_9	167.317691463106	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	1431	False	NA	22	True	AATAAA	-14	NA	6420202	6428060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.113	chr19	+	2879	9	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	343	256	intron_retention	FALSE	canonical	3	160	junction_6	345.970713175263	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTTGGTCTCTTATAA	2313	False	NA	41	True	AATATA	-13	NA	6421084	6426066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687
ES.17262.114	chr19	+	3238	9	NIC	ENSMUSG00000024949.18	novel	3221	12	NA	NA	474	0	intron_retention	FALSE	canonical	3	714	junction_8	166.730274320532	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	2444	False	NA	22	True	AATAAA	-22	NA	6421215	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424639_6424748_6424929_6425687
ES.17262.115	chr19	+	2460	7	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	8489	-684	-114	0	intron_retention	FALSE	canonical	3	714	junction_6	196.112000312746	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	3557	False	NA	15	True	AATAAA	-15	NA	6422328	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.116	chr19	+	1805	7	NNC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	536.471936720728	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	3557	False	NA	15	True	AATAAA	-15	NA	6422328	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6422447_6422547_6422656_6423602_6423784_6424060_6424318_6424578_6424639_6424748_6424929_6426325
ES.17262.117	chr19	+	2680	6	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-25	0	intron_retention	FALSE	canonical	3	364	junction_5	312.526222899775	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	3646	False	NA	15	True	AATAAA	-15	NA	6422417	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6422447_6422547_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.118	chr19	+	2163	5	NNC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	-393	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	454.687804982716	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	4486	False	NA	15	True	AATAAA	-15	NA	6423257	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6423921_6423958_6424318_6424578_6424639_6424748_6424929_6426325
ES.17262.119	chr19	+	1825	4	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	364	junction_3	354.605257841574	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	4867	False	NA	15	True	AATAAA	-15	NA	6423638	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6423784_6424039_6424639_6424748_6424929_6426325
ES.17262.12	chr19	+	7760	11	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-1	258	intron_retention	FALSE	canonical	3	714	junction_10	162.241825680063	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTCTCTTATAAAC	601	False	NA	43	True	AATATA	-15	NA	6413718	6426068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.121	chr19	+	3087	1	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	812	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCAGCCATCCTCTGG	6199	False	NA	19	True	AATAAA	-11	NA	6424970	6428057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6425000_6428100
ES.17262.13	chr19	+	2365	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	0	1988	0	262	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTCTCTTATAAACACAC	602	False	NA	47	True	AATATA	-19	NA	6413719	6426072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.14	chr19	+	2753	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-232	128	0	-128	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGTAATGCGCGTT	602	False	NA	-45	True	NA	NA	NA	6413719	6427098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.15	chr19	+	3435	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	363.821089443653	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTTTCTTTTCTTTTAA	602	False	NA	21	True	AATAAA	-21	NA	6413719	6427232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.19	chr19	+	3698	13	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_9	375.622030400537	1328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCTCTGGTCTTGCCCT	604	False	NA	28	True	AATAAA	-20	NA	6413721	6428066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.2	chr19	+	4380	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-37	11	intron_retention	FALSE	canonical	3	70	junction_9	334.755663382513	1328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTCTTGCCCTCCTCC	565	False	NA	33	True	AATAAA	-25	NA	6413682	6428071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.20	chr19	+	3807	12	NNC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	70	junction_8	383.282818566479	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	609	False	NA	22	True	AATAAA	-22	NA	6413726	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.22	chr19	+	4372	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	8	-27	8	27	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGCAGTGTGCTCT	610	False	NA	49	True	AATAAA	-41	NA	6413727	6428087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.23	chr19	+	5059	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	8	-3	intron_retention	FALSE	canonical	3	714	junction_11	163.161837216817	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	610	False	NA	18	True	AATAAA	-18	NA	6413727	6427229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.26	chr19	+	3358	12	NNC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	8	2	intron_retention	FALSE	non_canonical	0	0	junction_9	407.230842002034	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGTCCGTTTCTTTTCTT	610	False	NA	17	True	AATAAA	-17	NA	6413727	6427228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423921_6423958_6424639_6424748_6424929_6426325
ES.17262.27	chr19	+	4269	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	57	junction_2	340.283668733325	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	610	False	NA	22	True	AATAAA	-14	NA	6413727	6428060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.31	chr19	+	2659	13	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_9	375.622030400537	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	806	False	NA	18	True	AATAAA	-18	NA	6413923	6427229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.33	chr19	+	3205	12	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	57	junction_2	434.309159794025	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	822	False	NA	18	True	AATAAA	-18	NA	6413939	6427229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.34	chr19	+	4036	12	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	70	junction_9	333.120086058372	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	823	False	NA	15	True	AATAAA	-15	NA	6413940	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748
ES.17262.35	chr19	+	2111	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-10	256	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_9	415.912342193507	1302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTTGGTCTCTTATAA	824	False	NA	41	True	AATATA	-13	NA	6413941	6426066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424583_6424639_6424748_6424929_6425687
ES.17262.36	chr19	+	1807	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-10	258	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	337.498672836897	1302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTCTCTTATAAAC	824	False	NA	43	True	AATATA	-15	NA	6413941	6426068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424906_6425996
ES.17262.37	chr19	+	3281	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	70	junction_9	334.755663382513	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGTTTCTTTTCTTTTA	824	False	NA	20	True	AATAAA	-20	NA	6413941	6427231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.39	chr19	+	5480	12	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	364	junction_11	251.51622854826	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTCCGTTTCTTTTCTTT	833	False	NA	18	True	AATAAA	-18	NA	6413950	6427229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.4	chr19	+	2901	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-245	-7	-13	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	589	False	NA	22	True	AATAAA	-22	NA	6413706	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.40	chr19	+	1764	13	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	337.498672836897	1302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTCTCTTATAAAC	834	False	NA	43	True	AATATA	-15	NA	6413951	6426068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424845_6425968
ES.17262.42	chr19	+	2664	12	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	403.955524922859	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	834	False	NA	15	True	AATAAA	-15	NA	6413951	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424673_6424929_6426325
ES.17262.45	chr19	+	4951	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	1	254	intron_retention	FALSE	canonical	3	714	junction_11	163.64419173195	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGAGTTGGTCTCTTAT	835	False	NA	39	True	AATATA	-11	NA	6413952	6426064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.47	chr19	+	7000	11	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_5	485.592267236619	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGGTCCGTTTCTTT	836	False	NA	13	True	AATAAA	-13	NA	6413953	6427224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6415823_6418393_6421450_6421647_6421738_6422054_6422239_6422330_6422451_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.49	chr19	+	3269	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_8	344.489104407608	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	837	False	NA	16	True	AATAAA	-16	NA	6413954	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423618_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.5	chr19	+	3438	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-13	0	intron_retention	FALSE	canonical	1	4	junction_11	349.447053293565	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	589	False	NA	22	True	AATAAA	-22	NA	6413706	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424849_6424929_6425687
ES.17262.51	chr19	+	2669	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	337.498672836897	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	837	False	NA	14	True	AATAAA	-14	NA	6413954	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426301
ES.17262.53	chr19	+	3112	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	39	junction_9	431.969777749426	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	838	False	NA	14	True	AATAAA	-14	NA	6413955	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424213_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.54	chr19	+	2047	12	FSM	ENSMUSG00000024949.18	ENSMUST00000113485.9	3221	12	8	1166	8	256	multi-exon	FALSE	canonical	3	57	junction_2	431.203485933256	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTTGGTCTCTTATAA	842	False	NA	41	True	AATATA	-13	NA	6413959	6426066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.55	chr19	+	3273	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_4	435.212998618684	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	843	False	NA	14	True	AATAAA	-14	NA	6413960	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421655_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.56	chr19	+	4939	11	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	10	251	intron_retention	FALSE	canonical	3	714	junction_10	163.52235321203	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGAGAGTTGGTCTCT	844	False	NA	36	True	AATATA	-8	NA	6413961	6426061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.58	chr19	+	3536	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	10	-1	intron_retention	FALSE	canonical	3	98	junction_9	340.578506380342	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	844	False	NA	14	True	AATAAA	-14	NA	6413961	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.60	chr19	+	3305	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	1	intron_retention	FALSE	canonical	0	0	junction_3	348.962947730685	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	845	False	NA	16	True	AATAAA	-16	NA	6413962	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418498_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.62	chr19	+	8036	11	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	364	junction_10	255.261454199415	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	845	False	NA	15	True	AATAAA	-15	NA	6413962	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.63	chr19	+	8660	11	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	70	junction_7	353.026358789255	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	845	False	NA	22	True	AATAAA	-22	NA	6413962	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.65	chr19	+	3280	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	11	1	intron_retention	FALSE	canonical	0	0	junction_10	350.490479740733	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	845	False	NA	16	True	AATAAA	-16	NA	6413962	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424322_6424583_6424639_6424748_6424929_6425687
ES.17262.67	chr19	+	2814	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	430.01372717107	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGGTCCGTTTCTTTTCTT	846	False	NA	17	True	AATAAA	-17	NA	6413963	6427228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687_6426104_6426490
ES.17262.68	chr19	+	2561	12	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	380.920481495995	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	846	False	NA	15	True	AATAAA	-15	NA	6413963	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.69	chr19	+	4185	12	NIC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	12	-1	intron_retention	FALSE	canonical	3	98	junction_9	381.296353366917	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	846	False	NA	14	True	AATAAA	-14	NA	6413963	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ES.17262.7	chr19	+	3735	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	-243	-843	-11	9	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGGTCTTGCCCTCCT	591	False	NA	31	True	AATAAA	-23	NA	6413708	6428069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.70	chr19	+	3368	13	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	387.783113422381	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGCCATCCTCTGGT	846	False	NA	20	True	AATAAA	-12	NA	6413963	6428058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424849_6424929_6426325
ES.17262.72	chr19	+	3541	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	12	1	intron_retention	FALSE	canonical	3	714	junction_11	152.976204058881	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	846	False	NA	16	True	AATAAA	-16	NA	6413963	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424639_6424748_6424929_6425687
ES.17262.74	chr19	+	2007	14	NNC	ENSMUSG00000024949.18	novel	2282	14	NA	NA	12	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	426.511166498521	1302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTTGGTCTCTTATAA	846	False	NA	41	True	AATATA	-13	NA	6413963	6426066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687_6425903_6425989
ES.17262.75	chr19	+	3297	12	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	6	junction_10	363.100605324167	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	846	False	NA	22	True	AATAAA	-22	NA	6413963	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424673_6424929_6425687
ES.17262.76	chr19	+	3262	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_12	337.498672836897	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	847	False	NA	15	True	AATAAA	-15	NA	6413964	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424917_6425687
ES.17262.78	chr19	+	2841	14	FSM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	126	-685	14	1	multi-exon	FALSE	canonical	1	12	junction_13	335.352733135279	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGTCCGTTTCTTTTCT	848	False	NA	16	True	AATAAA	-16	NA	6413965	6427227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687_6425893_6426325
ES.17262.79	chr19	+	3473	14	NNC	ENSMUSG00000024949.18	novel	2282	14	NA	NA	14	8	intron_retention	FALSE	non_canonical	0	0	junction_13	338.207264626521	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTGGTCTTGCCCTCC	848	False	NA	30	True	AATAAA	-22	NA	6413965	6428068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687_6426425_6427066
ES.17262.8	chr19	+	3454	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	57	junction_2	340.283668733325	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	591	False	NA	15	True	AATAAA	-15	NA	6413708	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.80	chr19	+	3386	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	14	-2	intron_retention	FALSE	canonical	0	0	junction_9	351.970987993171	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGGTCCGTTTCTTT	848	False	NA	13	True	AATAAA	-13	NA	6413965	6427224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6423924_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.81	chr19	+	2526	13	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	453.660934019622	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGGTCCGTTTCTTT	849	False	NA	13	True	AATAAA	-13	NA	6413966	6427224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424849_6424929_6426325
ES.17262.82	chr19	+	8677	11	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	714	junction_10	162.241825680063	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	849	False	NA	22	True	AATAAA	-22	NA	6413966	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.83	chr19	+	6099	12	NIC	ENSMUSG00000024949.18	novel	3221	12	NA	NA	18	-1	intron_retention	FALSE	canonical	3	98	junction_9	337.845262638983	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	852	False	NA	14	True	AATAAA	-14	NA	6413969	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6415823_6418393_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
ES.17262.84	chr19	+	3181	12	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-19	-3	intron_retention	FALSE	canonical	0	0	junction_10	459.882809362459	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCGGGTCCGTTTCTT	856	False	NA	12	True	AATAAA	-12	NA	6413973	6427223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424748_6424929_6425687
ES.17262.85	chr19	+	3473	13	NNC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	456.071449080806	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	859	False	NA	22	True	AATAAA	-14	NA	6413976	6428060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414149_6415693_6415823_6418382_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ES.17262.86	chr19	+	4670	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-10	259	intron_retention	FALSE	canonical	3	714	junction_11	156.826113106415	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGTCTCTTATAAACA	865	False	NA	44	True	AATATA	-16	NA	6413982	6426069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.87	chr19	+	5826	12	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	714	junction_11	156.826113106415	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	866	False	NA	15	True	AATAAA	-15	NA	6413983	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414149_6415693_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.88	chr19	+	3159	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	265	929	-8	-95	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTACAGAAATTTCTCTG	867	False	NA	-12	True	NA	NA	NA	6413984	6427131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.90	chr19	+	2604	13	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	386.573291527263	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	873	False	NA	15	True	AATAAA	-15	NA	6413990	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414143_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.92	chr19	+	3322	13	NIC	ENSMUSG00000024949.18	novel	718	5	NA	NA	-55	0	intron_retention	FALSE	canonical	2	30	junction_1	341.11706812569	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	1051	False	NA	15	True	AATAAA	-15	NA	6414168	6427226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.95	chr19	+	3198	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_2	434.038464757317	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGGGTCCGTTTCTTT	1498	False	NA	13	True	AATAAA	-13	NA	6414615	6427224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414737_6415693_6415823_6418404_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.96	chr19	+	2578	13	NIC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	380.114776160511	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	1500	False	NA	22	True	AATAAA	-22	NA	6414617	6427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ES.17262.98	chr19	+	4039	13	NIC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	35	0	intron_retention	FALSE	canonical	3	30	junction_1	341.11706812569	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	1504	False	NA	22	True	AATAAA	-14	NA	6414621	6428060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17262.99	chr19	+	3263	13	NNC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	39	-1	intron_retention	FALSE	canonical	0	0	junction_1	348.508757661363	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTCCGTTTCTTTT	1508	False	NA	14	True	AATAAA	-14	NA	6414625	6427225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6414800_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ES.17263.1	chr19	-	5968	3	FSM	ENSMUSG00000079467.9	ENSMUST00000113496.2	518	3	-8	-5442	-8	5366	multi-exon	FALSE	canonical	2	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGACTGCGAAGATACA	NA	False	NA	NA	False	AATAAA	-19	NA	6413797	6400185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6405871_6410689_6410812_6413636
ES.17263.2	chr19	-	608	3	FSM	ENSMUSG00000079467.9	ENSMUST00000113496.2	518	3	-27	-63	-27	-13	multi-exon	FALSE	canonical	2	2	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTAGTCACCTAAACAC	NA	False	NA	NA	False	NA	NA	NA	6413816	6405564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6405871_6410689_6410812_6413636
ES.17264.1	chr19	+	2899	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	-26	1	-26	-1	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTCTGTTGCAAAAT	NA	False	NA	13	True	AATAAA	-23	NA	6434402	6448488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ES.17264.2	chr19	+	1715	11	ISM	ENSMUSG00000032648.15	ENSMUST00000113483.2	2583	18	5027	-10	-3269	-1	3prime_fragment	FALSE	canonical	1	2	junction_2	6.74981481227448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCTCTGTTGCAAAAT	NA	False	NA	13	True	AATAAA	-23	NA	6439471	6448488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ES.17264.3	chr19	+	1649	9	ISM	ENSMUSG00000032648.15	ENSMUST00000113483.2	2583	18	5649	-2	-2647	2	3prime_fragment	FALSE	canonical	2	12	junction_2	5.3619026473818	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTACTCTTCTCTGT	NA	False	NA	5	True	AATAAA	-15	NA	6440093	6448480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ES.17264.4	chr19	+	1269	8	ISM	ENSMUSG00000032648.15	ENSMUST00000113483.2	2583	18	6523	-2	-1773	2	3prime_fragment	FALSE	canonical	2	12	junction_1	5.60247758603645	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTACTCTTCTCTGT	NA	False	NA	5	True	AATAAA	-15	NA	6440967	6448480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ES.17264.5	chr19	+	3097	5	NNC	ENSMUSG00000032648.15	novel	532	3	NA	NA	1865	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.871965661856	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTCTTCTCTGTTGCAA	NA	False	NA	10	True	AATAAA	-20	NA	6444605	6448485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6445388_6445603_6445805_6446106_6447743_6447895_6447963_6448074
ES.17265.1	chr19	+	785	5	FSM	ENSMUSG00000032946.17	ENSMUST00000113475.8	573	5	-209	-3	-93	-2	multi-exon	FALSE	canonical	0	0	junction_3	121.807994401024	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGAGGGTCATGTCA	NA	False	NA	12	True	NA	NA	NA	6449276	6453666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6449548_6451750_6451894_6452501_6452605_6453053_6453117_6453461
ES.17265.11	chr19	+	469	3	ISM	ENSMUSG00000032946.17	ENSMUST00000113467.2	409	4	1033	-24	-39	-2	3prime_fragment	FALSE	canonical	3	21	junction_1	111.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGAGGGTCATGTCA	NA	False	NA	12	True	NA	NA	NA	6451685	6453666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6451894_6453060_6453117_6453461
ES.17265.12	chr19	+	526	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	7	2	7	-2	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGAGGGTCATGTCA	NA	False	NA	12	True	NA	NA	NA	6451738	6453666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
ES.17265.13	chr19	+	2160	7	NNC	ENSMUSG00000032946.17	novel	2296	17	NA	NA	-591	2056	intron_retention	FALSE	canonical	2	5	junction_6	15.2934263292726	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGTGTGTTTGATA	NA	False	NA	NA	False	NA	NA	NA	6454020	6461754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6461147
ES.17265.14	chr19	+	3541	4	ISM	ENSMUSG00000032946.17	ENSMUST00000135532.2	1517	6	2135	-2063	-1529	2063	3prime_fragment	FALSE	canonical	3	20	junction_1	14.6363322667334	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTTGATATGTCAAC	NA	False	NA	NA	False	NA	NA	NA	6456905	6461761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6457353_6458200_6458279_6458477_6458601_6458868
ES.17265.15	chr19	+	920	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	0	-1	0	1	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAGCCTAAAACCCTC	NA	False	NA	21	True	AATAAA	-23	NA	6458434	6465242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ES.17265.16	chr19	+	4761	3	NIC	ENSMUSG00000032946.17	novel	2157	17	NA	NA	1151	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_1	6	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGGATCATCAGCCTAA	NA	False	NA	14	True	AATAAA	-16	NA	6459585	6465235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6464072_6464821_6464885_6465023
ES.17265.17	chr19	+	753	5	ISM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	4566	-2	4566	2	3prime_fragment	FALSE	canonical	3	149	junction_1	9.57535900110278	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAGCCTAAAACCCTCT	NA	False	NA	22	True	AATAAA	-24	NA	6463000	6465243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ES.17265.18	chr19	+	2014	2	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	4655	1	intron_retention	FALSE	canonical	3	176	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAGCCTAAAACCCTC	NA	False	NA	21	True	AATAAA	-23	NA	6463089	6465242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6464885_6465023
ES.17265.19	chr19	+	779	4	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	4736	-2	intron_retention	FALSE	canonical	3	164	junction_1	5.65685424949238	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATCATCAGCCTAAAAC	NA	False	NA	17	True	AATAAA	-19	NA	6463170	6465238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6463495_6463894_6464072_6464821_6464885_6465023
ES.17265.2	chr19	+	2211	13	NNC	ENSMUSG00000032946.17	novel	2296	17	NA	NA	-57	2054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.0645912846064	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCTTTGTGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	6449428	6461752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6449548_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6461147
ES.17265.20	chr19	+	2048	1	NIC	ENSMUSG00000032946.17	novel	2219	17	NA	NA	4760	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAGCCTAAAACCCTC	NA	False	NA	21	True	AATAAA	-23	NA	6463194	6465242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6463200_6465200
ES.17265.4	chr19	+	2253	17	NNC	ENSMUSG00000032946.17	novel	919	7	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.9567478444828	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAGCCTAAAACCCTC	NA	False	NA	21	True	AATAAA	-23	NA	6449868	6465242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454483_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ES.17265.5	chr19	+	3703	13	NNC	ENSMUSG00000032946.17	novel	1517	6	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_3	89.8511114133944	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATCATCAGCCTAAAACC	NA	False	NA	18	True	AATAAA	-20	NA	6449871	6465239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6454776_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6464072_6464821_6464885_6465023
ES.17265.7	chr19	+	2187	13	NNC	ENSMUSG00000032946.17	novel	1517	6	NA	NA	1	2054	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	87.1331595892172	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCTTTGTGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	6449894	6461752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6449995_6451750_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6461147
ES.17265.8	chr19	+	590	5	NIC	ENSMUSG00000032946.17	novel	648	7	NA	NA	19	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.357558422953	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGTGAGGGTCATGTC	NA	False	NA	11	True	NA	NA	NA	6449922	6453665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461
ES.17266.1	chr19	+	2622	8	NNC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-980	-1115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.25876975726313	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTTTTCTCCTAGTAAC	NA	False	NA	NA	False	AGTAAA	-15	NA	6467780	6531611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6467964_6477834_6478809_6493660_6493679_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139
ES.17266.2	chr19	+	3541	8	NIC	ENSMUSG00000033768.18	novel	5505	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.55550625999976	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGCCCAGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	6468769	6532727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6469003_6477834_6478809_6493660_6493679_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.3	chr19	+	4890	10	NIC	ENSMUSG00000033768.18	novel	6667	23	NA	NA	-1	1277	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.67129228448251	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTGGCTTAGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	6468793	6534004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6469003_6477834_6478809_6493660_6493679_6500557_6500630_6505008_6505311_6513853_6513878_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.4	chr19	+	3208	6	NIC	ENSMUSG00000033768.18	novel	5505	20	NA	NA	-35	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.33238075793812	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGCCCAGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	6477917	6532728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6478809_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.5	chr19	+	3309	8	NNC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.55550625999976	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCAGTTTTGAAATT	NA	False	NA	NA	False	NA	NA	NA	6477934	6532730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6478820_6498281_6498315_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.6	chr19	+	3265	7	NNC	ENSMUSG00000033768.18	novel	5001	21	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.54405625374562	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGCCCAGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	6477942	6532727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6478820_6500557_6500630_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.7	chr19	+	3644	6	NNC	ENSMUSG00000033768.18	novel	2748	6	NA	NA	557	1276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.63818119165458	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGCCTGGCTTAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	6479232	6534003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6479285_6505008_6505311_6522287_6522450_6523347_6523787_6531139_6531527_6531701
ES.17266.8	chr19	+	4592	2	ISM	ENSMUSG00000033768.18	ENSMUST00000140435.2	1933	4	4822	-1	4822	0	3prime_fragment	FALSE	canonical	2	7	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGGCCCAGTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	6527960	6532727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6531527_6531701
ES.17267.1	chr19	-	287	1	Intergenic	novelGene_14362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCATGGCATAGGGCA	NA	False	NA	NA	False	NA	NA	NA	6445595	6445308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6445300_6445600
ES.17267.2	chr19	-	202	2	Antisense	novelGene_ENSMUSG00000033768.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGGGTTCAATTCCC	NA	False	NA	NA	False	NA	NA	NA	6484736	6445392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_6445420_6484561
ES.17267.4	chr19	-	217	1	Intergenic	novelGene_14363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACGTGCATATATCTGA	NA	False	NA	NA	False	NA	NA	NA	6484738	6484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6484500_6484700
ES.17268.1	chr19	+	2521	4	ISM	ENSMUSG00000033768.18	ENSMUST00000113458.8	3503	7	15811	1	-3566	0	3prime_fragment	FALSE	canonical	1	1	junction_1	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTCCTGTGTAGTTTGT	NA	False	NA	14	True	AAAAAG	-24	NA	6563668	6583246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6563836_6566952_6567279_6569278_6569358_6581297
ES.17268.2	chr19	+	2449	4	NNC	ENSMUSG00000033768.18	novel	576	3	NA	NA	-1551	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.63299316185545	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCTGTGTAGTTTGTT	NA	False	NA	15	True	AAAAAG	-25	NA	6565683	6583247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6565778_6566952_6567279_6569278_6569358_6581297
ES.17269.1	chr19	-	3292	2	FSM	ENSMUSG00000052188.7	ENSMUST00000137184.2	519	2	-2677	-96	-2454	18	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTTCTGTCTATCT	NA	False	NA	NA	False	AAGAAA	-16	NA	6584495	6580722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6581294_6581774
ES.1727.1	chr1	+	2015	9	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	-6	0	intron_retention	TRUE	canonical	3	3085	junction_5	888.748830871242	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862170	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.10	chr1	+	3192	2	FSM	ENSMUSG00000065160.3_ENSMUSG00000053332.14_ENSMUSG00000064816.3_ENSMUSG00000064440.3	ENSMUST00000159037.2	636	2	-2554	-2	1	0	multi-exon	FALSE	canonical	3	4541	junction_1	0	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160865843_160866026
ES.1727.11	chr1	+	1435	8	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1967.91313894922	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862733	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.12	chr1	+	755	9	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	1867.83236667534	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862733	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.13	chr1	+	3376	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2192	-1100	-2192	1100	mono-exon	FALSE	NA	NA	NA	NA	NA	779	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862733	160866109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862700_160866100
ES.1727.14	chr1	+	1820	6	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	3576	junction_1	897.552984508436	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.15	chr1	+	1011	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1206	junction_5	1501.58137218199	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.16	chr1	+	1379	8	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	3085	junction_5	1057.96161343888	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862734	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864886_160865074_160865118_160865564_160865843_160866026
ES.1727.17	chr1	+	2377	5	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	4541	junction_4	602.010952973449	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.18	chr1	+	1762	8	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1206	junction_4	1646.15688492802	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864735_160864857_160864886_160865074_160865608_160865794_160865843_160866026
ES.1727.19	chr1	+	2453	4	NIC	ENSMUSG00000053332.14	novel	1614	7	NA	NA	-1	1	intron_retention	FALSE	canonical	3	3576	junction_1	1082.78232140886	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGAAGTGTGCATTT	NA	False	NA	19	True	ATTAAA	-15	NA	160862734	160866106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160865843_160866026
ES.1727.2	chr1	+	1063	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	-561	0	-5	0	multi-exon	FALSE	canonical	3	1206	junction_7	1656.43137771865	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862171	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.20	chr1	+	740	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1206	junction_6	1699.9521757979	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.21	chr1	+	2141	5	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	3576	junction_1	760.165935832434	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863815_160864118_160865608_160865794_160865843_160866026
ES.1727.22	chr1	+	2814	2	ISM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	-1	-1	-1	0	intron_retention	FALSE	canonical	3	3576	junction_1	0	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862734	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160862765_160863321
ES.1727.23	chr1	+	450	11	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1764.8963737285	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862734	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863330_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.24	chr1	+	1219	8	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_5	2149.29102691268	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862734	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864423_160864693_160864742_160865059_160865118_160865564_160865843_160866026
ES.1727.25	chr1	+	366	8	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	1967.59352654818	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.27	chr1	+	430	10	FSM	ENSMUSG00000053332.14	ENSMUST00000159119.8	665	10	237	-2	0	0	multi-exon	FALSE	canonical	2	2	junction_6	1774.02353596925	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.28	chr1	+	1203	9	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_4	1518.87762838222	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.29	chr1	+	1626	7	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	865.328967631514	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.3	chr1	+	418	8	FSM	ENSMUSG00000053332.14	ENSMUST00000161005.8	430	8	10	2	10	0	multi-exon	FALSE	canonical	3	115	junction_1	2436.42213426297	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862186	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862290_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ES.1727.30	chr1	+	280	6	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_4	2195.84234406753	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865794_160865843_160866026
ES.1727.31	chr1	+	2925	2	FSM	ENSMUSG00000064816.3_ENSMUSG00000053332.14_ENSMUSG00000065228.3_ENSMUSG00000064440.3	ENSMUST00000163081.2	370	2	-2143	-412	0	0	multi-exon	FALSE	canonical	3	5177	junction_1	0	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160865118_160865564
ES.1727.32	chr1	+	1322	8	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	801.669482507394	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.33	chr1	+	1620	7	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	2039.73571953711	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862735	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.34	chr1	+	760	10	FSM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	0	-1	0	0	multi-exon	FALSE	canonical	3	3085	junction_6	1099.1542202985	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.36	chr1	+	3010	3	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	4541	junction_2	828.5	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863375_160863552_160865843_160866026
ES.1727.37	chr1	+	959	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_6	1435.28796955717	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.38	chr1	+	1768	7	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	3576	junction_1	865.811260546367	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGAAGTGTGCATTT	NA	False	NA	19	True	ATTAAA	-15	NA	160862735	160866106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160865608_160865794_160865843_160866026
ES.1727.39	chr1	+	2741	3	NIC	ENSMUSG00000053332.14	novel	2556	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	4541	junction_2	318	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160865118_160865564_160865843_160866026
ES.1727.40	chr1	+	893	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.41	chr1	+	770	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_6	1448.71477178912	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.42	chr1	+	1801	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	792.59714861965	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGTGAAGTGTGCAT	NA	False	NA	17	True	ATTAAA	-13	NA	160862735	160866104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.43	chr1	+	1817	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_3	1113.37587543471	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865843_160866026
ES.1727.44	chr1	+	1123	9	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	1860.54535015946	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862735	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.45	chr1	+	1618	8	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1878.20522231807	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862735	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160863585_160863777_160863815_160864118_160864150_160864389_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.46	chr1	+	803	11	FSM	ENSMUSG00000053332.14	ENSMUST00000161461.8	793	11	-12	2	0	0	multi-exon	FALSE	canonical	3	1206	junction_6	1709.07735342787	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.47	chr1	+	2260	5	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	2269.02262824768	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160864882_160865074_160865843_160866026
ES.1727.48	chr1	+	1571	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	134	junction_1	2092.90840697819	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.49	chr1	+	1236	9	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_4	1746.91148441328	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.5	chr1	+	370	7	NIC	ENSMUSG00000053332.14	novel	430	8	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_1	2691.50903563204	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862203	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862290_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864423_160865794_160865843_160866026
ES.1727.50	chr1	+	2075	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_3	1169.58580702743	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865608_160865794_160865843_160866026
ES.1727.52	chr1	+	467	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	388	junction_4	1994.59027371538	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGAAGTGTGCATTT	NA	False	NA	19	True	ATTAAA	-15	NA	160862735	160866106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.53	chr1	+	1814	6	ISM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	-18	2	0	0	intron_retention	FALSE	canonical	3	3085	junction_3	1191.30936368351	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794
ES.1727.54	chr1	+	955	9	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_5	1098.83904644857	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.55	chr1	+	2359	5	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	4541	junction_4	465.919252660802	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.56	chr1	+	1804	6	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2003.04733843212	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.57	chr1	+	2070	6	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	947.714429561986	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGTGAAGTGTGCAT	NA	False	NA	17	True	ATTAAA	-13	NA	160862735	160866104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865608_160865794_160865843_160866026
ES.1727.58	chr1	+	2003	5	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	968.306511389859	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794
ES.1727.59	chr1	+	1081	9	NNC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_5	1831.38065660173	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGAAGTGTGCATTT	NA	False	NA	19	True	ATTAAA	-15	NA	160862735	160866106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864150_160864389_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.6	chr1	+	861	8	FSM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	-517	2	42	0	multi-exon	FALSE	canonical	3	131	junction_6	1912.24889508	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862218	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ES.1727.60	chr1	+	443	10	NNC	ENSMUSG00000053332.14	novel	665	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1774.59954794189	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862735	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864427_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.61	chr1	+	2631	3	ISM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	0	3	0	-1	intron_retention	FALSE	canonical	3	3576	junction_1	1311	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862735	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160862765_160863321_160863375_160863552
ES.1727.62	chr1	+	926	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_6	1750.73062702263	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864423_160864693_160864735_160864857_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.63	chr1	+	1326	8	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_4	1025.59764557659	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863815_160864118_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.64	chr1	+	2995	3	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	4541	junction_2	609	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863585_160863777_160865843_160866026
ES.1727.65	chr1	+	1082	9	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	753.146068170046	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.66	chr1	+	2182	4	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	658.189604563575	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160865118_160865564_160865843_160866026
ES.1727.67	chr1	+	426	10	NIC	ENSMUSG00000053332.14	novel	557	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	1652.03833692402	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862735	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.7	chr1	+	2499	7	NNC	ENSMUSG00000053332.14	novel	557	11	NA	NA	50	0	intron_retention	FALSE	non_canonical	0	0	junction_3	2094.08426021707	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862226	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160863375_160863552_160863585_160863777_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.70	chr1	+	1188	9	NNC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1867.83236667534	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGTGAAGTGTGCAT	NA	False	NA	17	True	ATTAAA	-13	NA	160862737	160866104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.71	chr1	+	2546	4	FSM	ENSMUSG00000053332.14	ENSMUST00000161229.8	2556	4	2	8	0	-1	multi-exon	FALSE	canonical	3	4541	junction_3	423.601489872524	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862737	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.73	chr1	+	681	11	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1206	junction_7	1691.46642000366	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862740	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.74	chr1	+	1066	10	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_5	1509.85648896971	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862741	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.75	chr1	+	1041	10	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	2029.59590942521	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862742	160866105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864742_160865059_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.76	chr1	+	3164	2	NIC	ENSMUSG00000053332.14	novel	872	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	5759	junction_1	0	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160862744	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863585_160863777
ES.1727.77	chr1	+	2023	6	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	138	0	intron_retention	FALSE	canonical	3	4541	junction_5	560.347891938571	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862895	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.78	chr1	+	1395	6	NNC	ENSMUSG00000053332.14	novel	793	11	NA	NA	-87	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	2145.4616659358	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAACTGTGAAGTGTG	NA	False	NA	14	True	ATTAAA	-10	NA	160863502	160866101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160863585_160863777_160864882_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.79	chr1	+	140	1	FSM	ENSMUSG00000064816.3	ENSMUST00000082882.3	83	1	3	-60	3	60	mono-exon	FALSE	NA	NA	NA	NA	NA	679	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCAGGACTCGTCAGGA	NA	False	NA	NA	False	CATAAA	-9	NA	160863629	160863769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160863600_160863800
ES.1727.8	chr1	+	502	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	55	0	-41	0	multi-exon	FALSE	canonical	3	3085	junction_7	1053.46856146731	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862691	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ES.1727.81	chr1	+	107	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	5	-28	5	28	mono-exon	FALSE	NA	NA	NA	NA	NA	754	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATATTTCTAAACGG	NA	False	NA	NA	False	AGTAAA	-11	NA	160864930	160865037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160864900_160865000
ES.1727.9	chr1	+	3181	2	NNC	ENSMUSG00000053332.14	novel	502	12	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862733	160866107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160864882_160865074
ES.17270.1	chr19	+	2794	2	NNC	ENSMUSG00000033768.18	novel	3285	6	NA	NA	19254	789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGGGTCATAGTTA	NA	False	NA	NA	False	NA	NA	NA	6586488	6594988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6586665_6592370
ES.17270.2	chr19	+	5133	1	Antisense	novelGene_ENSMUSG00000061742.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTCCTCGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	6586489	6591622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_6586500_6591600
ES.17270.3	chr19	+	4146	2	Antisense	novelGene_ENSMUSG00000061742.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTCCTCGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	6586489	6591622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_6586665_6587651
ES.17271.1	chr19	+	3703	4	Intergenic	novelGene_14364	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCTGCAATCAAAATTTA	5954	False	NA	NA	False	NA	NA	NA	6651102	6657197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6651134_6651823_6653059_6653276_6654193_6655676
ES.17272.1	chr19	+	1788	2	NNC	ENSMUSG00000085285.2	novel	769	3	NA	NA	-591	-8	intron_retention	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAATCTAAAAGTCAT	NA	False	NA	NA	False	AATAAA	-9	NA	6695125	6697194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6695264_6695544
ES.17272.2	chr19	+	820	2	Intergenic	novelGene_14365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTTATCTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	6695144	6698099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6695264_6697398
ES.17273.1	chr19	+	182	1	Intergenic	novelGene_14366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGAAATGGGCA	NA	False	NA	NA	False	NA	NA	NA	6707893	6708075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6707900_6708100
ES.17274.1	chr19	+	87	1	Intergenic	novelGene_14367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	6804780	6804867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6804800_6804900
ES.17275.1	chr19	-	3487	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	-340	-7	-340	7	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTGTGTTCATGG	NA	False	NA	1	True	AATAAA	-25	NA	6818344	6806570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ES.17275.11	chr19	-	3349	14	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	3	0	intron_retention	FALSE	canonical	2	3	junction_11	14.0249144329679	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	6817977	6806577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816827_6817047_6817701_6817774_6817860
ES.17275.12	chr19	-	3136	16	NNC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_2	18.2788280684391	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGATCTGTGGTTTGT	NA	False	NA	-7	True	AATAAA	-17	NA	6817993	6806578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6807508_6807682_6807847_6807987_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817747
ES.17275.14	chr19	-	3309	15	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	33	junction_14	9.22314081702173	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGGATCTGTGGTTT	NA	False	NA	-9	True	AATAAA	-15	NA	6817979	6806580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6808115_6808358_6808554_6808641_6808816_6809135_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ES.17275.15	chr19	-	3008	18	NNC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.0931159420129	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTGGATCTGTGGTT	NA	False	NA	-10	True	AATAAA	-14	NA	6817983	6806581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6816862_6816968_6817047_6817701_6817774_6817860
ES.17275.2	chr19	-	3115	17	NNC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.4654761414894	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTTTGTGTTCATGG	NA	False	NA	1	True	AATAAA	-25	NA	6818005	6806570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6807508_6807682_6807847_6807987_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ES.17275.3	chr19	-	3068	17	NNC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.3330910832242	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGGTTTGTGTTCAT	NA	False	NA	-1	True	AATAAA	-23	NA	6817982	6806572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814791_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ES.17275.4	chr19	-	2992	16	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	14.1509324388497	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6817971	6806576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816827_6817047_6817701_6817774_6817860
ES.17275.5	chr19	-	3162	16	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_15	14.2791222886189	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6817984	6806576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817747
ES.17275.6	chr19	-	3099	17	NNC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.4933982816315	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	6817980	6806576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809435_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ES.17275.8	chr19	-	3069	17	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	14.1901153976985	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	6817979	6806577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817747_6817774_6817860
ES.17275.9	chr19	-	2342	9	NIC	ENSMUSG00000118668.1	novel	3140	17	NA	NA	2170	0	intron_retention	FALSE	canonical	3	40	junction_8	8.59869176095992	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	6814783	6806577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6807508_6807682_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694
ES.17276.1	chr19	-	6197	13	NIC	ENSMUSG00000047810.10	novel	3843	18	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_5	1.82574185835055	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTCTGCTGGCTGC	8227	False	NA	NA	False	AATAAA	-22	NA	6832642	6821990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6823784_6823930_6825103_6825301_6825737_6825908_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812_6827941_6830309_6831471_6831555_6831693_6831846_6831956_6832109_6832257_6832573
ES.17276.2	chr19	-	3904	18	NNC	ENSMUSG00000047810.10	novel	3843	18	NA	NA	-58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.77837840680364	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTGTGTCTGCTGGCTG	8205	False	NA	NA	False	AATAAA	-21	NA	6832664	6821991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6822488_6823714_6823784_6823930_6824138_6824644_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812_6827941_6830305_6831471_6831555_6831693_6831846_6831956_6832109_6832257_6832573
ES.17277.1	chr19	+	178	1	Intergenic	novelGene_14368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAAGAAAATAATA	NA	False	NA	NA	False	NA	NA	NA	6839707	6839885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6839700_6839900
ES.17278.1	chr19	-	181	1	Intergenic	novelGene_14369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAACACTA	3010	False	NA	NA	False	NA	NA	NA	6867739	6867558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6867600_6867700
ES.17279.1	chr19	+	176	1	Intergenic	novelGene_14370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGGTGTAAA	5291	False	NA	NA	False	NA	NA	NA	6868972	6869148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6869000_6869100
ES.1728.1	chr1	+	1978	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	-65	-3	-11	3	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTATTCTGTTAGT	NA	False	NA	23	True	AATAAA	-29	NA	160898271	160913911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ES.1728.10	chr1	+	4527	4	ISM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	4	3	4	1	intron_retention	FALSE	canonical	3	21	junction_2	48.0832611206852	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTGGTCTTGTCTTTG	NA	False	NA	9	True	NA	NA	NA	160898539	160914291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477
ES.1728.11	chr1	+	1551	5	NNC	ENSMUSG00000026708.17	novel	1910	5	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	50.1023951523278	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	8	True	AATAAA	-14	NA	160898542	160913896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160898927_160902326_160902501_160905939_160906051_160910477_160911021_160913557
ES.1728.12	chr1	+	1361	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	260	3262	7	-12	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATCAAATTAGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	160898542	160911028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
ES.1728.13	chr1	+	1443	4	NIC	ENSMUSG00000026708.17	novel	1910	5	NA	NA	7	5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	52.7909924976685	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCCAATTGAAGTTATT	NA	False	NA	11	True	AATAAA	-17	NA	160898542	160913899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160898927_160902326_160902501_160910477_160911021_160913557
ES.1728.14	chr1	+	4320	5	FSM	ENSMUSG00000026708.17	ENSMUST00000195571.2	4341	5	19	2	19	-2	multi-exon	FALSE	canonical	2	3	junction_3	51.1731130575422	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGTTATTTATTCTG	NA	False	NA	18	True	AATAAA	-24	NA	160898604	160913906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160907437_160907581_160910477
ES.1728.15	chr1	+	1766	6	FSM	ENSMUSG00000026708.17	ENSMUST00000192850.6	1914	6	160	-12	36	-2	multi-exon	FALSE	canonical	2	3	junction_3	49.9095181303126	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGTTATTTATTCTG	NA	False	NA	18	True	AATAAA	-24	NA	160898621	160913906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160907437_160907581_160910477_160911021_160913557
ES.1728.16	chr1	+	4598	3	NIC	ENSMUSG00000026708.17	novel	1914	6	NA	NA	-1262	0	intron_retention	FALSE	canonical	3	102	junction_2	10.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTTTCCAATTGAAG	NA	False	NA	6	True	AATAAA	-12	NA	160902332	160913894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160906051_160910477_160911021_160913557
ES.1728.17	chr1	+	1725	2	ISM	ENSMUSG00000026708.17	ENSMUST00000192150.6	1756	6	11116	-3	6041	3	3prime_fragment	FALSE	canonical	3	102	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTTCCAATTGAAGTTA	3148	False	NA	9	True	AATAAA	-15	NA	160909635	160913897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160911021_160913557
ES.1728.2	chr1	+	1800	5	FSM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-198	395	1	5	multi-exon	FALSE	canonical	3	21	junction_2	42.0200844834943	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCCAATTGAAGTTATT	NA	False	NA	11	True	AATAAA	-17	NA	160898337	160913899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477_160911021_160913557
ES.1728.3	chr1	+	2276	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	18	-384	18	2	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGGTCTTGTCTTTGT	NA	False	NA	10	True	NA	NA	NA	160898354	160914292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ES.1728.4	chr1	+	4378	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	113	392	59	4	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTCCAATTGAAGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	160898395	160913898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
ES.1728.5	chr1	+	2264	6	FSM	ENSMUSG00000026708.17	ENSMUST00000192150.6	1756	6	-114	-394	-56	-2	multi-exon	FALSE	canonical	2	3	junction_3	51.3754805330325	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAATGCTGGTCTTGTCT	NA	False	NA	6	True	NA	NA	NA	160898405	160914288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160898927_160902326_160902501_160905898_160906051_160907437_160907581_160910477_160911021_160913557
ES.1728.6	chr1	+	1292	4	ISM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-24	3266	-8	-12	5prime_fragment	FALSE	canonical	3	21	junction_2	48.0832611206852	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGATCAAATTAGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	160898511	160911028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477
ES.1728.7	chr1	+	4157	4	ISM	ENSMUSG00000026708.17	ENSMUST00000143486.7	1997	5	-21	398	-5	2	intron_retention	FALSE	canonical	3	21	junction_2	48.0832611206852	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTCCAATTGAAGTT	NA	False	NA	8	True	AATAAA	-14	NA	160898514	160913896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160898927_160902326_160902501_160905898_160906051_160910477
ES.1728.8	chr1	+	4668	3	NIC	ENSMUSG00000026708.17	novel	4883	4	NA	NA	2	-8	intron_retention	FALSE	canonical	3	123	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAATTAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	160898537	160911032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160898927_160902326_160906051_160910477
ES.1728.9	chr1	+	3810	2	NIC	ENSMUSG00000026708.17	novel	4883	4	NA	NA	2	4	intron_retention	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTCCAATTGAAGTTAT	NA	False	NA	10	True	AATAAA	-16	NA	160898537	160913898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160898927_160910477
ES.17280.1	chr19	+	1038	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	-46	-7	3	7	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGCAGCAAATATACA	9268	False	NA	23	True	ATTAAA	-23	NA	6887068	6888403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ES.17280.2	chr19	+	1084	3	FSM	ENSMUSG00000038812.17	ENSMUST00000174786.2	646	3	-448	10	18	-10	multi-exon	FALSE	canonical	3	803	junction_1	28.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAAGCGGTTTCTC	9283	False	NA	6	True	ATTAAA	-6	NA	6887083	6888386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6887631_6887730_6887833_6887951
ES.17280.3	chr19	+	4837	1	Genic_Genomic	ENSMUSG00000038812.17	novel	NA	NA	NA	NA	-3	3948	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGAAAGGAAGG	9728	False	NA	NA	False	NA	NA	NA	6887528	6892365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_6887500_6892400
ES.17281.1	chr19	-	4263	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	230	-3231	102	3222	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTATCCGTAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	6887244	6880842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ES.17281.10	chr19	-	2371	7	NIC	ENSMUSG00000024955.16	novel	2241	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	35.8457342882897	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9652	False	NA	-1	True	AATATA	-16	NA	6899209	6888345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891661_6897430_6897768_6898989
ES.17281.11	chr19	-	667	2	FSM	ENSMUSG00000024955.16	ENSMUST00000145192.4	2489	2	-42	1864	-1	-1864	multi-exon	FALSE	canonical	3	104	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCTTCCTGGGACATC	9684	False	NA	NA	False	NA	NA	NA	6899177	6897288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6897768_6898989
ES.17281.2	chr19	-	2903	6	FSM	ENSMUSG00000024955.16_ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	-1633	-8	-1633	-1	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGTTGTCTGCTTTGCC	NA	False	NA	-1	True	AATAAA	-29	NA	6889107	6884065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ES.17281.3	chr19	-	2181	5	FSM	ENSMUSG00000024953.18	ENSMUST00000149261.8	755	5	-1383	-43	-67	-1	multi-exon	FALSE	canonical	3	499	junction_2	9.17537465175128	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	6887052	6884074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349
ES.17281.4	chr19	-	1783	4	NIC	ENSMUSG00000024953.18	novel	501	5	NA	NA	47	-1	intron_retention	FALSE	canonical	3	493	junction_3	10.1980390271856	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	6887427	6884074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6884320_6884433_6884496_6884609_6885485_6886826
ES.17281.6	chr19	-	3238	2	ISM	ENSMUSG00000024953.18	ENSMUST00000145300.2	1826	3	-80	10	48	-1	intron_retention	FALSE	canonical	3	499	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	6887426	6884074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6884496_6884609
ES.17281.7	chr19	-	1984	12	Fusion	ENSMUSG00000024955.16_ENSMUSG00000024953.18	novel	2274	7	NA	NA	-1	-1	multi-exon	FALSE	canonical	0	0	junction_5	209.607188697618	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	9731	False	NA	-10	True	AATAAA	-20	NA	6899130	6884074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6889169_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
ES.17281.8	chr19	-	2271	7	FSM	ENSMUSG00000024955.16	ENSMUST00000239322.2	2274	7	2	1	2	0	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9655	False	NA	-1	True	AATATA	-16	NA	6899206	6888345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
ES.17281.9	chr19	-	1928	6	NIC	ENSMUSG00000024955.16	novel	2241	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	37.7761829728733	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9661	False	NA	-1	True	AATATA	-16	NA	6899200	6888345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6898989
ES.17282.1	chr19	-	758	5	FSM	ENSMUSG00000050623.6	ENSMUST00000057716.6	784	5	24	2	3	-1	multi-exon	FALSE	canonical	3	36	junction_4	4.76969600708473	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCAGTGCGTGGCTGCTT	7414	False	NA	-1	True	ATTAAA	-20	NA	6902724	6899792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902475_6902659
ES.17282.2	chr19	-	721	5	NNC	ENSMUSG00000050623.6	novel	806	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	19.0984292547843	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	7418	False	NA	-2	True	ATTAAA	-19	NA	6902720	6899793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902443_6902659
ES.17282.3	chr19	-	906	4	NIC	ENSMUSG00000050623.6	novel	784	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	36	junction_3	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTCAGTGCGTGGC	7416	False	NA	-6	True	ATTAAA	-15	NA	6902722	6899797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6900029_6900668_6900968_6902161_6902475_6902659
ES.17282.4	chr19	-	1091	3	FSM	ENSMUSG00000050623.6	ENSMUST00000237563.2	1064	3	-33	6	-2	0	multi-exon	FALSE	canonical	3	44	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAGTCAGTGCGTGGC	7416	False	NA	-6	True	ATTAAA	-15	NA	6902722	6899797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6900029_6900668_6900968_6902161
ES.17283.1	chr19	-	1777	7	FSM	ENSMUSG00000024957.10	ENSMUST00000025908.8	1763	7	-38	24	-38	-24	multi-exon	FALSE	canonical	0	0	junction_5	1.25830573921179	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGCATGCTCCTGGGTC	9898	False	NA	NA	False	AATAAA	-19	NA	6911921	6903053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6903744_6904458_6904599_6904985_6905173_6905361_6905523_6905649_6905777_6910070_6910337_6911715
ES.17284.1	chr19	+	1750	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	-304	6	-304	0	multi-exon	FALSE	canonical	2	8	junction_1	43.6526695123626	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	8377	False	NA	10	True	AATAAA	-15	NA	6918924	6929261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ES.17284.2	chr19	+	935	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	56	-1	-7	1	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGCCTCTATCCTTCGT	9377	False	NA	11	True	AATAAA	-16	NA	6919924	6929262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ES.17284.3	chr19	+	169	1	Intergenic	novelGene_14372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	6921711	6921880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6921700_6921900
ES.17285.1	chr19	+	3329	1	Intergenic	novelGene_14374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAAGTCCCGGGTTTGA	4769	False	NA	NA	False	NA	NA	NA	6947399	6950728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6947400_6950700
ES.17286.1	chr19	+	1436	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	-438	1	-438	-1	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTTGGCTGGTCTTTT	1142	False	NA	NA	False	AATAAA	-28	NA	6951897	6954691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ES.17286.10	chr19	+	1010	3	ISM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	78	2	78	1	intron_retention	FALSE	canonical	3	3169	junction_1	60.5	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTTGGCTGGTCTTT	1658	False	NA	NA	False	AATAAA	-27	NA	6952413	6954690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_6952875_6953911_6953996_6954225
ES.17286.11	chr19	+	2109	2	NIC	ENSMUSG00000056612.8	novel	552	3	NA	NA	82	0	intron_retention	FALSE	canonical	3	3100	junction_1	0	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTTTATATTGACT	1662	False	NA	NA	False	ATTAAA	-13	NA	6952417	6954617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6954259_6954349
ES.17286.12	chr19	+	859	3	NNC	ENSMUSG00000056612.8	novel	686	3	NA	NA	120	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1584.5	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTAACAGGCTTGGCT	1700	False	NA	NA	False	AATAAA	-20	NA	6952455	6954683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6952875_6953911_6954014_6954345
ES.17286.2	chr19	+	1134	4	FSM	ENSMUSG00000056612.8	ENSMUST00000236218.2	605	4	-316	-213	-26	1	multi-exon	FALSE	canonical	3	53	junction_1	1483.18268897964	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTTGGCTGGTCTTT	1554	False	NA	NA	False	AATAAA	-27	NA	6952309	6954690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6952986_6953911_6953996_6954225_6954259_6954349
ES.17286.3	chr19	+	925	5	NNC	ENSMUSG00000056612.8	novel	999	4	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1381.39791063256	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTTGGCTGGTCTTT	1575	False	NA	NA	False	AATAAA	-27	NA	6952330	6954690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6952389_6952465_6952875_6953911_6953996_6954225_6954259_6954349
ES.17286.4	chr19	+	1030	3	FSM	ENSMUSG00000056612.8	ENSMUST00000237084.2	686	3	-273	-71	0	0	multi-exon	FALSE	canonical	3	201	junction_2	1484	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGCTTGGCTGGTCTT	1580	False	NA	NA	False	AATAAA	-26	NA	6952335	6954689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6952875_6953911_6953996_6954282
ES.17286.6	chr19	+	2246	1	NIC	ENSMUSG00000056612.8	novel	999	4	NA	NA	36	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	679	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTTTATATTGACT	1616	False	NA	NA	False	ATTAAA	-13	NA	6952371	6954617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6952400_6954600
ES.17286.7	chr19	+	1679	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	63	-743	63	743	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTAAGTTGTGGCCAGG	1643	False	NA	NA	False	GGGGCT	-38	NA	6952398	6955435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ES.17286.9	chr19	+	618	5	NNC	ENSMUSG00000056612.8	novel	999	4	NA	NA	64	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1381.39791063256	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTATATTGACTCT	1644	False	NA	NA	False	ATTAAA	-15	NA	6952399	6954619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6952500_6952743_6952875_6953911_6953996_6954225_6954259_6954349
ES.17287.2	chr19	-	3158	6	FSM	ENSMUSG00000024958.14	ENSMUST00000238183.2	1255	6	-1903	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.68328157299975	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	5581	False	NA	-12	True	AATAAA	-19	NA	6919793	6915437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719
ES.17287.3	chr19	-	2061	8	NNC	ENSMUSG00000024958.14	novel	1729	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9.66584561373558	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCTGTCACTCGTCT	6511	False	NA	-12	True	AATAAA	-19	NA	6918863	6915437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850_6918579_6918664
ES.17287.4	chr19	-	3915	5	NIC	ENSMUSG00000024958.14	novel	1858	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	22	junction_2	2.27760839478607	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	5564	False	NA	-14	True	AATAAA	-17	NA	6919810	6915439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6916243_6916379_6916509_6916628_6916779_6916896_6917770_6917850
ES.17287.5	chr19	-	2105	7	NNC	ENSMUSG00000024958.14	novel	1717	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	9.56846672960488	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTCCTGTCACTCGT	6527	False	NA	-14	True	AATAAA	-17	NA	6918847	6915439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6915898_6916123_6916243_6916403_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ES.17287.6	chr19	-	2090	7	NNC	ENSMUSG00000024958.14	novel	1858	7	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.2531175171419	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTCCCTCCTGTCACT	6551	False	NA	-17	True	AATAAA	-14	NA	6918823	6915442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6915898_6916123_6916243_6916379_6916505_6916628_6916771_6916896_6917123_6917719_6917770_6917850
ES.17288.1	chr19	-	195	1	Intergenic	novelGene_14371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTGCTTACCTCCCA	4500	False	NA	NA	False	NA	NA	NA	6920874	6920679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6920700_6920900
ES.17289.1	chr19	-	164	1	Intergenic	novelGene_14373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAGTAAATAAATAAATA	9418	False	NA	NA	False	NA	NA	NA	6925134	6924970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6925000_6925100
ES.1729.1	chr1	+	3527	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.6739504924393	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970253	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970289_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995539_160995590
ES.1729.10	chr1	+	3662	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTACACGTTTTCTCA	NA	False	NA	10	True	NA	NA	NA	160970288	160998072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995606_160995654
ES.1729.11	chr1	+	3471	6	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.18304780321	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970290	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160995281_160995541_160995590
ES.1729.12	chr1	+	3296	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	41.6613329919563	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970296	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.13	chr1	+	3769	9	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.3616694212757	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970296	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160973617_160973738_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.15	chr1	+	3652	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	4	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970296	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995567_160995615
ES.1729.16	chr1	+	3474	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.0644600051477	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970301	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.17	chr1	+	3707	9	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.3616694212757	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970306	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160973617_160973684_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.18	chr1	+	3595	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.6739504924393	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970307	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995541_160995590
ES.1729.19	chr1	+	3631	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970309	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995549_160995603
ES.1729.2	chr1	+	2115	3	ISM	ENSMUSG00000044835.16	ENSMUST00000125018.8	673	5	0	6316	0	-6316	5prime_fragment	FALSE	canonical	0	0	junction_1	51	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCCCCCAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	160970260	160984549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160970289_160978534_160978888_160982815
ES.1729.20	chr1	+	3631	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970310	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978540_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.21	chr1	+	671	3	NNC	ENSMUSG00000044835.16	novel	849	6	NA	NA	3	-11824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTCAAACTTACCTGACA	NA	False	NA	NA	False	ATTAAA	-22	NA	160970312	160979041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160973617_160973684_160978534
ES.1729.22	chr1	+	5314	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	9	1685	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTATTGTAAAAGG	NA	False	NA	NA	False	AATAAA	-20	NA	160970318	160999753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995672_160995719
ES.1729.23	chr1	+	3616	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.6980801304367	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970319	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982825_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.24	chr1	+	3629	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970319	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995699_160995745
ES.1729.26	chr1	+	1016	7	FSM	ENSMUSG00000044835.16	ENSMUST00000111608.8	3714	7	39	2659	11	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5547308932143	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTTCCTGCCAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	160970320	160995409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281
ES.1729.27	chr1	+	3416	6	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3105313449246	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970320	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160988236_160988332_160990836_160990976_160995281_160995541_160995590
ES.1729.28	chr1	+	606	2	ISM	ENSMUSG00000044835.16	ENSMUST00000052245.9	849	6	-15	12710	12	-11814	5prime_fragment	FALSE	canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGACAGCTGTGTTTC	NA	False	NA	NA	False	ATTAAA	-32	NA	160970321	160979051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160970411_160978534
ES.1729.29	chr1	+	1288	2	ISM	ENSMUSG00000044835.16	ENSMUST00000052245.9	849	6	-15	12028	12	-11132	5prime_fragment	FALSE	canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCTGGCTCTTTATTAAC	NA	False	NA	NA	False	NA	NA	NA	160970321	160979733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160970411_160978534
ES.1729.3	chr1	+	3495	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.6739504924393	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970263	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970289_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995679_160995750
ES.1729.30	chr1	+	3556	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.6739504924393	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970322	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995679_160995750
ES.1729.31	chr1	+	3632	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	13	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	47.0010855280633	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970322	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160971879_160971935_160978541_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160995281_160995688_160995735
ES.1729.32	chr1	+	3570	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	47.5626332495653	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970328	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991763_160991785_160995281_160995664_160995736
ES.1729.33	chr1	+	2735	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-8	-884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTTGTTGAAAATCC	NA	False	NA	NA	False	AATATA	-18	NA	160970328	160997184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995674_160995721
ES.1729.34	chr1	+	3592	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970329	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995679_160995750
ES.1729.35	chr1	+	3438	6	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.18304780321	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970329	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160995281_160995688_160995735
ES.1729.36	chr1	+	3572	8	NNC	ENSMUSG00000044835.16	novel	673	5	NA	NA	3110	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATTTTATGTTACACG	835	False	NA	2	True	NA	NA	NA	160973446	160998064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160973488_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.37	chr1	+	4704	1	NIC	ENSMUSG00000044835.16	novel	673	5	NA	NA	9509	-6316	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCCCCCAAAGAAACCT	1170	False	NA	NA	False	NA	NA	NA	160979845	160984549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_160979800_160984500
ES.1729.38	chr1	+	5138	6	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	12318	1795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.8347661863083	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGTCCCATCATTTC	3979	False	NA	NA	False	NA	NA	NA	160982654	160999863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.39	chr1	+	3046	5	NNC	ENSMUSG00000044835.16	novel	673	5	NA	NA	16181	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	43.8256488828175	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	7842	False	NA	6	True	NA	NA	NA	160986517	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160986591_160988236_160988332_160990836_160990976_160995281_160995688_160995735
ES.1729.4	chr1	+	3390	7	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.0644600051477	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTATGTTACACGTT	NA	False	NA	4	True	NA	NA	NA	160970263	160998066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970289_160978534_160978888_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.40	chr1	+	4059	4	NNC	ENSMUSG00000044835.16	novel	523	5	NA	NA	16811	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.8354092066628	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTATGTTACACGTTT	21	False	NA	5	True	NA	NA	NA	160987147	160998067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160988332_160990836_160990976_160995281_160995541_160995590
ES.1729.41	chr1	+	4087	5	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	16828	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	39.789288759665	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	38	False	NA	6	True	NA	NA	NA	160987164	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160988332_160990836_160990976_160991741_160991785_160995281_160995598_160995646
ES.1729.42	chr1	+	3088	4	NNC	ENSMUSG00000044835.16	novel	523	5	NA	NA	17763	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.8354092066628	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	599	False	NA	8	True	NA	NA	NA	160988099	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160988332_160990836_160990976_160995281_160995679_160995750
ES.1729.43	chr1	+	3142	5	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	17772	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.789288759665	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	608	False	NA	6	True	NA	NA	NA	160988108	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.44	chr1	+	532	4	ISM	ENSMUSG00000044835.16	ENSMUST00000192384.6	523	5	17817	0	17773	0	3prime_fragment	FALSE	canonical	3	77	junction_2	12.657891697365	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTTCCTGCCAAGTT	609	False	NA	NA	False	ATTAAA	-14	NA	160988109	160995409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_160988332_160990836_160990976_160991741_160991785_160995281
ES.1729.45	chr1	+	2718	2	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	24942	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	5580	False	NA	6	True	NA	NA	NA	160995278	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160995679_160995750
ES.1729.46	chr1	+	4406	2	NNC	ENSMUSG00000044835.16	novel	523	5	NA	NA	24946	1692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGTAAAAGGCTCACAG	5584	False	NA	NA	False	AATAAA	-27	NA	160995282	160999760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160995679_160995750
ES.1729.5	chr1	+	3557	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970267	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970289_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995606_160995654
ES.1729.7	chr1	+	3675	9	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1204983904212	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTACACGTTTTCTC	NA	False	NA	9	True	NA	NA	NA	160970271	160998071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970289_160973617_160973738_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.8	chr1	+	3661	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTTACACGTTTT	NA	False	NA	6	True	NA	NA	NA	160970284	160998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995541_160995590
ES.1729.9	chr1	+	3662	8	NNC	ENSMUSG00000044835.16	novel	3714	7	NA	NA	-5	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.3546735006532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTTACACGTTTTCT	NA	False	NA	8	True	NA	NA	NA	160970287	160998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_160970411_160978534_160978888_160982815_160982984_160988236_160988332_160990836_160990976_160991741_160991785_160995281_160995674_160995721
ES.17290.1	chr19	-	7428	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	72	-3243	18	1855	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACAGTGTCTTTCATAA	4383	False	NA	NA	False	AATGAA	-19	NA	6947110	6927837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.10	chr19	-	4348	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	11	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_31	172.51343882864	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGTAGTTTGGATG	4322	False	NA	-3	True	AATAAA	-21	NA	6947171	6931075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946231_6946329_6946914
ES.17290.102	chr19	-	5103	28	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	577	junction_21	49.1818941335367	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4362	False	NA	-11	True	AATAAA	-13	NA	6947131	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.103	chr19	-	4310	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	577	junction_24	51.5414244122138	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4356	False	NA	-11	True	AATAAA	-13	NA	6947137	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.104	chr19	-	4032	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	88	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	172.379906666126	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	NA	False	NA	-11	True	AATAAA	-13	NA	6951631	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943776_6943823_6943999_6944078_6951562
ES.17290.105	chr19	-	4296	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	577	junction_23	47.1783117909943	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4352	False	NA	-11	True	AATAAA	-13	NA	6947141	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.108	chr19	-	4151	17	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	104	-2	intron_retention	FALSE	canonical	3	588	junction_11	50.9717676145334	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	1669	False	NA	-11	True	AATAAA	-13	NA	6940755	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6936326_6936418_6936574_6937155_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581
ES.17290.109	chr19	-	4624	28	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	-2	intron_retention	FALSE	canonical	3	577	junction_21	51.7224310772726	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4337	False	NA	-11	True	AATAAA	-13	NA	6947156	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.11	chr19	-	4180	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	132.629655227998	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGTAGTTTGGATG	4299	False	NA	-3	True	AATAAA	-21	NA	6947194	6931075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943826_6946933
ES.17290.110	chr19	-	5121	27	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	24	-2	intron_retention	FALSE	canonical	3	577	junction_20	52.9663843378277	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4335	False	NA	-11	True	AATAAA	-13	NA	6947158	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.111	chr19	-	3329	23	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	149.327196351662	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4336	False	NA	-11	True	AATAAA	-13	NA	6947157	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940749_6943990_6944078_6946914
ES.17290.112	chr19	-	4248	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	172.749197160702	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	NA	False	NA	-11	True	AATAAA	-13	NA	6951688	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6949111_6949248_6951562
ES.17290.113	chr19	-	4513	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	1	-2	intron_retention	FALSE	canonical	3	577	junction_22	51.1901591906021	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4366	False	NA	-11	True	AATAAA	-13	NA	6947127	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.114	chr19	-	4523	29	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	-2	intron_retention	FALSE	canonical	1	10	junction_17	131.044172915479	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4336	False	NA	-11	True	AATAAA	-13	NA	6947157	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940222_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.115	chr19	-	4171	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_7	126.520815151763	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4373	False	NA	-11	True	AATAAA	-13	NA	6947120	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933254_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.116	chr19	-	4159	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	101	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_31	197.561128726698	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	NA	False	NA	-11	True	AATAAA	-13	NA	6951618	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931656_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6951562
ES.17290.118	chr19	-	4903	28	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	24	-3	intron_retention	FALSE	canonical	3	577	junction_21	51.3105074578589	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCCTGTGTACAGTGTA	4335	False	NA	-12	True	AATAAA	-12	NA	6947158	6931084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.119	chr19	-	4156	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	132.30113742194	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCCTGTGTACAGTGTA	4323	False	NA	-12	True	AATAAA	-12	NA	6947170	6931084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942148_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.121	chr19	-	5392	27	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	577	junction_20	48.9101942399712	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCCTGTGTACAGTGTA	4292	False	NA	-12	True	AATAAA	-12	NA	6947201	6931084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.123	chr19	-	5547	28	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-501	-4	intron_retention	FALSE	canonical	2	4	junction_27	136.080404699611	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTGTGTACAGTGT	NA	False	NA	-13	True	AATAAA	-11	NA	6952220	6931085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6936326_6936418_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6952086
ES.17290.124	chr19	-	4925	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-15	-4	intron_retention	FALSE	canonical	1	1	junction_22	134.158312474936	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTGTGTACAGTGT	4296	False	NA	-13	True	AATAAA	-11	NA	6947197	6931085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942874_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.125	chr19	-	2533	9	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-1110	-4	intron_retention	FALSE	canonical	3	668	junction_1	34.7769679529426	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTGTGTACAGTGT	6233	False	NA	-13	True	AATAAA	-11	NA	6936191	6931085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163
ES.17290.128	chr19	-	3993	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	24	240	24	132	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCCTGCATCTTCCTG	4335	False	NA	NA	False	TTTAAA	-29	NA	6947158	6931320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.129	chr19	-	2998	1	FSM	ENSMUSG00000024960.10	ENSMUST00000235832.2	1268	1	-704	-1026	-272	713	mono-exon	FALSE	NA	NA	NA	NA	NA	941	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCCTAGTCTACAAAGT	9930	False	NA	NA	False	NA	NA	NA	6941563	6938565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6938600_6941600
ES.17290.14	chr19	-	4414	33	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	200.031520953574	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAGTGTAGTTTGGA	NA	False	NA	-5	True	AATAAA	-19	NA	6951719	6931077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6949111_6949248_6951562
ES.17290.15	chr19	-	5469	15	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-1533	3	intron_retention	FALSE	canonical	3	608	junction_14	41.5425157187778	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAGTGTAGTTTGGA	8669	False	NA	-5	True	AATAAA	-19	NA	6942824	6931077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6933427_6933514_6933669_6934994_6935087_6935265_6935554_6936163_6936326_6936418_6937757_6939242_6939452_6940060_6940248_6940329_6940823_6941740_6941888_6941964_6942132_6942664
ES.17290.16	chr19	-	4237	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	130.811947296704	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTACAGTGTAGTTTGG	4324	False	NA	-6	True	AATAAA	-18	NA	6947169	6931078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932460_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.17	chr19	-	4310	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	1	intron_retention	FALSE	canonical	3	577	junction_23	51.6313190171264	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACAGTGTAGTTTG	4337	False	NA	-7	True	AATAAA	-17	NA	6947156	6931079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.18	chr19	-	4031	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	1	6	junction_28	133.329880907684	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACAGTGTAGTTTG	4337	False	NA	-7	True	AATAAA	-17	NA	6947156	6931079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943598_6946914
ES.17290.19	chr19	-	4281	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-530	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	170.051195082573	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6952249	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6952086
ES.17290.2	chr19	-	4677	32	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-18	-10	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	128.131281856612	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTTCTACGTTCCCTA	4347	False	NA	NA	False	AATAAA	-41	NA	6947146	6929702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6930526_6931447_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.20	chr19	-	4599	30	FSM	ENSMUSG00000024960.10	ENSMUST00000237726.2	4558	30	-40	-1	14	0	multi-exon	FALSE	canonical	3	577	junction_23	51.3241082764095	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4325	False	NA	-8	True	AATAAA	-16	NA	6947168	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.21	chr19	-	4580	29	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_5	135.030004224307	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4337	False	NA	-8	True	AATAAA	-16	NA	6947156	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932737_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.23	chr19	-	4085	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	132.777356492537	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4336	False	NA	-8	True	AATAAA	-16	NA	6947157	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.24	chr19	-	4469	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	0	intron_retention	FALSE	canonical	3	577	junction_23	51.4844099788277	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4336	False	NA	-8	True	AATAAA	-16	NA	6947157	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.25	chr19	-	4198	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	130.967192668834	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4337	False	NA	-8	True	AATAAA	-16	NA	6947156	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940215_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.26	chr19	-	4180	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	47	0	intron_retention	FALSE	canonical	3	21	junction_29	128.396050479891	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6951672	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6951562
ES.17290.27	chr19	-	4172	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-380	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	170.409911628607	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	3931	False	NA	-8	True	AATAAA	-16	NA	6947562	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6947508
ES.17290.29	chr19	-	4196	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	172.51343882864	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6951672	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946231_6946329_6951562
ES.17290.31	chr19	-	6694	23	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_5	231.584592651841	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4374	False	NA	-8	True	AATAAA	-16	NA	6947119	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931836_6932072_6932131_6932208_6932299_6932391_6933275_6933390_6933441_6933514_6933669_6934994_6935087_6935265_6936326_6936418_6937281_6937500_6937750_6939245_6940248_6940329_6940415_6940581_6940823_6941740_6941883_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.32	chr19	-	4154	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	132.651385261861	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4337	False	NA	-8	True	AATAAA	-16	NA	6947156	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.34	chr19	-	4357	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-19	0	intron_retention	FALSE	canonical	3	577	junction_23	50.1044331488271	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4292	False	NA	-8	True	AATAAA	-16	NA	6947201	6931080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.36	chr19	-	4205	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_19	129.314281242767	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4336	False	NA	-9	True	AATAAA	-15	NA	6947157	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940222_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.38	chr19	-	4260	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	130.646427003913	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4337	False	NA	-9	True	AATAAA	-15	NA	6947156	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933305_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.4	chr19	-	4148	32	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	12	-509	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	128.131281856612	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTGTTGCAGCCCCA	4377	False	NA	NA	False	AATGAA	-15	NA	6947116	6930201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6930526_6931447_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.40	chr19	-	4246	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_29	130.405201838986	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4345	False	NA	-9	True	AATAAA	-15	NA	6947148	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943975_6944078_6946914
ES.17290.42	chr19	-	5169	29	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	25	0	intron_retention	FALSE	canonical	3	577	junction_22	49.6842581730278	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4336	False	NA	-9	True	AATAAA	-15	NA	6947157	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.46	chr19	-	4695	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	18	0	intron_retention	FALSE	canonical	3	577	junction_22	51.3520636272342	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4329	False	NA	-9	True	AATAAA	-15	NA	6947164	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.47	chr19	-	4189	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	131.047696999562	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4377	False	NA	-9	True	AATAAA	-15	NA	6947116	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937750_6939236_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.48	chr19	-	4013	29	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	180.931190410237	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4359	False	NA	-9	True	AATAAA	-15	NA	6947134	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943826_6946933
ES.17290.49	chr19	-	6604	25	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-7	0	intron_retention	FALSE	canonical	3	577	junction_18	51.0194509476533	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4304	False	NA	-9	True	AATAAA	-15	NA	6947189	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.5	chr19	-	4334	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	-62	-15	-62	15	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGGATGAAAACACTCT	4249	False	NA	7	True	AATAAA	-31	NA	6947244	6931065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.50	chr19	-	4801	28	NNC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_20	137.246266699346	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4322	False	NA	-9	True	AATAAA	-15	NA	6947171	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942017_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.52	chr19	-	3960	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-372	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	132.629655227998	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	3939	False	NA	-9	True	AATAAA	-15	NA	6947554	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943827_6947508
ES.17290.54	chr19	-	4209	32	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-1083	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	170.409911628607	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	3228	False	NA	-9	True	AATAAA	-15	NA	6948265	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6948173
ES.17290.55	chr19	-	4502	29	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	73	0	intron_retention	FALSE	canonical	3	21	junction_28	131.352831437052	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	NA	False	NA	-9	True	AATAAA	-15	NA	6951646	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6951562
ES.17290.58	chr19	-	4160	28	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-2319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	136.567182500324	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	7883	False	NA	-9	True	AATAAA	-15	NA	6943610	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935914_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510
ES.17290.59	chr19	-	4153	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-20	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_28	132.339149219614	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4345	False	NA	-9	True	AATAAA	-15	NA	6947148	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943999_6944078_6946914
ES.17290.6	chr19	-	4285	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	12	6	intron_retention	FALSE	canonical	3	577	junction_23	49.9596983832428	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTGTAGTTTGGATGA	4377	False	NA	-2	True	AATAAA	-22	NA	6947116	6931074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.60	chr19	-	2149	16	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-2454	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.690400411374	998	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4889	False	NA	-9	True	AATAAA	-15	NA	6937535	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6935051_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500
ES.17290.61	chr19	-	4187	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	130.722760068781	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4373	False	NA	-9	True	AATAAA	-15	NA	6947120	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932719_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.62	chr19	-	4158	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	130.053578702523	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	NA	False	NA	-9	True	AATAAA	-15	NA	6952256	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6952086
ES.17290.63	chr19	-	4521	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-8	0	intron_retention	FALSE	canonical	3	577	junction_22	52.2229692798883	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4357	False	NA	-9	True	AATAAA	-15	NA	6947136	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.64	chr19	-	4305	33	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-2025	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	227.150005502972	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	2286	False	NA	-9	True	AATAAA	-15	NA	6949207	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941883_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946231_6946329_6946752_6946882_6949111
ES.17290.65	chr19	-	4341	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	0	intron_retention	FALSE	canonical	3	588	junction_14	48.3633689664848	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4337	False	NA	-9	True	AATAAA	-15	NA	6947156	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.66	chr19	-	5119	27	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-23	0	intron_retention	FALSE	canonical	3	577	junction_20	51.3054001333216	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4342	False	NA	-9	True	AATAAA	-15	NA	6947151	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.67	chr19	-	4291	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_3	133.100446634012	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4342	False	NA	-9	True	AATAAA	-15	NA	6947151	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932120_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.68	chr19	-	4611	28	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-20	0	intron_retention	FALSE	canonical	3	577	junction_21	53.1726230908809	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4345	False	NA	-9	True	AATAAA	-15	NA	6947148	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.7	chr19	-	4160	31	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-9	5	combination_of_known_splicesites	FALSE	canonical	3	21	junction_30	127.230940506711	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGTAGTTTGGATG	NA	False	NA	-3	True	AATAAA	-21	NA	6951728	6931075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6951562
ES.17290.70	chr19	-	4117	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	174.190460894581	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4330	False	NA	-9	True	AATAAA	-15	NA	6947163	6931081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941883_6941964_6942017_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.71	chr19	-	4518	29	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	26	-1	intron_retention	FALSE	canonical	1	10	junction_17	133.54160763368	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4337	False	NA	-10	True	AATAAA	-14	NA	6947156	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940222_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.74	chr19	-	4222	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	174.020372370593	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4328	False	NA	-10	True	AATAAA	-14	NA	6947165	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933264_6933390_6933422_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.78	chr19	-	5519	26	NNC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-523	-1	intron_retention	FALSE	canonical	0	0	junction_25	140.897727447961	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	NA	False	NA	-10	True	AATAAA	-14	NA	6952242	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6952040
ES.17290.79	chr19	-	4182	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	130.832127382977	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4347	False	NA	-10	True	AATAAA	-14	NA	6947146	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942095_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.81	chr19	-	4880	22	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-1964	-1	intron_retention	FALSE	canonical	3	577	junction_19	48.5224309351343	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	8238	False	NA	-10	True	AATAAA	-14	NA	6943255	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188
ES.17290.82	chr19	-	4482	32	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-209	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_31	169.57430326799	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	NA	False	NA	-10	True	AATAAA	-14	NA	6951928	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946752_6946882_6951562
ES.17290.83	chr19	-	4339	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	27	-1	intron_retention	FALSE	canonical	1	12	junction_21	130.853668350599	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4338	False	NA	-10	True	AATAAA	-14	NA	6947155	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941883_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.84	chr19	-	5029	27	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	26	-1	intron_retention	FALSE	canonical	3	577	junction_21	53.7179793158226	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4337	False	NA	-10	True	AATAAA	-14	NA	6947156	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.85	chr19	-	4678	29	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	577	junction_23	52.1441780654605	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4345	False	NA	-10	True	AATAAA	-14	NA	6947148	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.86	chr19	-	4216	30	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	132.15977790747	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4326	False	NA	-10	True	AATAAA	-14	NA	6947167	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943142_6943488_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.87	chr19	-	4287	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	130.811947296704	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4303	False	NA	-10	True	AATAAA	-14	NA	6947190	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933366_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.9	chr19	-	4250	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	122.620593702689	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTGTAGTTTGGATG	4311	False	NA	-3	True	AATAAA	-21	NA	6947182	6931075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931656_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.90	chr19	-	4796	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	577	junction_23	49.0908061990218	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4352	False	NA	-10	True	AATAAA	-14	NA	6947141	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.91	chr19	-	4192	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	131.054988459043	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4366	False	NA	-10	True	AATAAA	-14	NA	6947127	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940815_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.92	chr19	-	4349	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_30	128.22596807546	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4336	False	NA	-10	True	AATAAA	-14	NA	6947157	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944197_6946914
ES.17290.93	chr19	-	4862	28	NIC	ENSMUSG00000024960.10	novel	4558	30	NA	NA	9	-1	intron_retention	FALSE	canonical	3	577	junction_21	51.8225843326399	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4374	False	NA	-10	True	AATAAA	-14	NA	6947119	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.94	chr19	-	4242	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	131.054988459043	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGTGTACAGTGTAGT	4336	False	NA	-10	True	AATAAA	-14	NA	6947157	6931082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940835_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.97	chr19	-	4213	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	130.126899601889	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4346	False	NA	-11	True	AATAAA	-13	NA	6947147	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943259_6943506_6943652_6943753_6943823_6943999_6944078_6946914
ES.17290.98	chr19	-	4144	26	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	-2349	-2	intron_retention	FALSE	canonical	1	12	junction_21	139.666459824827	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	7853	False	NA	-11	True	AATAAA	-13	NA	6943640	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941883_6941964_6942132_6942664_6942766_6942876_6943108_6943188_6943269_6943510
ES.17290.99	chr19	-	4171	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.722760068781	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTGTGTACAGTGTAG	4381	False	NA	-11	True	AATAAA	-13	NA	6947112	6931083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932720_6933088_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ES.17291.1	chr19	-	817	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-20	-155	-20	155	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATATCTTCCCTGATA	NA	False	NA	NA	False	AATAAA	-16	NA	6957828	6954953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ES.17291.10	chr19	-	2257	3	NIC	ENSMUSG00000056629.17	novel	1526	6	NA	NA	28	-31	intron_retention	FALSE	canonical	3	687	junction_2	1	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957780	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6955303_6955378_6956039_6956340
ES.17291.11	chr19	-	1092	4	NIC	ENSMUSG00000056629.17	novel	642	6	NA	NA	-23	-31	intron_retention	FALSE	canonical	3	194	junction_3	232.875264656616	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957831	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6955303_6955378_6956039_6956340_6956546_6957761
ES.17291.12	chr19	-	617	7	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	7	-31	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	320.696637546036	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957801	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6956681_6956701_6957761
ES.17291.13	chr19	-	566	5	NIC	ENSMUSG00000056629.17	novel	642	6	NA	NA	-1	-35	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	300.455071516525	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTTAAAAACAAAAACAAAC	NA	False	NA	-44	True	NA	NA	NA	6957809	6955149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6955303_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ES.17291.2	chr19	-	769	7	NNC	ENSMUSG00000056629.17	novel	664	6	NA	NA	11	155	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	324.666196098222	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATATCTTCCCTGATA	NA	False	NA	NA	False	AATAAA	-16	NA	6957797	6954953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6956681_6956701_6957761
ES.17291.3	chr19	-	752	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	68	-156	7	153	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCATATCTTCCCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	6957801	6954955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ES.17291.4	chr19	-	690	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	-48	0	13	0	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGAGTCTGTATTTCT	NA	False	NA	-3	True	TTTAAA	-35	NA	6957856	6955108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ES.17291.5	chr19	-	681	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	-14	-3	-14	0	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGAGTCTGTATTTCT	NA	False	NA	-3	True	TTTAAA	-35	NA	6957883	6955108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ES.17291.7	chr19	-	510	6	NNC	ENSMUSG00000056629.17	novel	642	6	NA	NA	11	-31	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	273.883478873772	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957797	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956462_6957761
ES.17291.8	chr19	-	605	6	NNC	ENSMUSG00000056629.17	novel	1526	6	NA	NA	-192	-31	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	275.879973901695	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957425	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957378
ES.17291.9	chr19	-	1819	5	ISM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	2	37	2	-31	intron_retention	FALSE	canonical	3	677	junction_3	18.1865334794732	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	-40	True	NA	NA	NA	6957806	6955145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340
ES.17292.1	chr19	+	173	1	Intergenic	novelGene_14375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTGTGGTG	9787	False	NA	NA	False	NA	NA	NA	6960542	6960715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6960500_6960700
ES.17293.1	chr19	-	1275	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	-117	0	-95	0	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4663	False	NA	-1	True	GATAAA	-17	NA	6965114	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.10	chr19	-	1232	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-96	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4662	False	NA	-2	True	GATAAA	-16	NA	6965115	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
ES.17293.11	chr19	-	1172	6	NNC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.068949747347	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4705	False	NA	-2	True	GATAAA	-16	NA	6965072	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962888_6963436_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.12	chr19	-	1294	7	NNC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	99.6962052102954	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4734	False	NA	-2	True	GATAAA	-16	NA	6965043	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963398_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.13	chr19	-	1614	5	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-60	-1	intron_retention	FALSE	canonical	3	113	junction_2	72.1664742106749	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4698	False	NA	-2	True	GATAAA	-16	NA	6965079	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962864_6963172_6963855_6964141_6964185_6964719
ES.17293.14	chr19	-	1259	7	NNC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	101.686473480443	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4695	False	NA	-2	True	GATAAA	-16	NA	6965082	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963371_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.15	chr19	-	1817	3	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	28	junction_2	144.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCTGCTTCTGTCAT	4759	False	NA	-4	True	GATAAA	-14	NA	6965018	6959843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6963855_6964719
ES.17293.16	chr19	-	1198	7	NNC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	98.7938369647734	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCTGCTTCTGTCAT	4736	False	NA	-4	True	GATAAA	-14	NA	6965041	6959843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963753_6964141_6964185_6964719
ES.17293.17	chr19	-	1343	5	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	150	-3	intron_retention	FALSE	canonical	1	1	junction_4	118.258984859502	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCTGCTTCTGTCAT	4930	False	NA	-4	True	GATAAA	-14	NA	6964847	6959843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6964141
ES.17293.18	chr19	-	1164	6	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-61	-3	combination_of_known_splicesites	FALSE	canonical	2	17	junction_3	102.792995870341	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGGCTGCTTCTGTCAT	4697	False	NA	-4	True	GATAAA	-14	NA	6965080	6959843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963657_6963855_6964141_6964185_6964719
ES.17293.2	chr19	-	1058	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	127	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_3	99.8751220274599	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4907	False	NA	-1	True	GATAAA	-17	NA	6964870	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963657_6963855_6964141_6964185_6964719
ES.17293.3	chr19	-	1437	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-156	0	-156	0	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4602	False	NA	-1	True	GATAAA	-17	NA	6965175	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.4	chr19	-	1399	7	NNC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	115.564796639038	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4678	False	NA	-1	True	GATAAA	-17	NA	6965099	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963371_6963463_6963636_6963855_6964141_6964185_6964719
ES.17293.5	chr19	-	2487	3	ISM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	-9	0	-9	0	intron_retention	FALSE	canonical	3	141	junction_2	88	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4749	False	NA	-1	True	GATAAA	-17	NA	6965028	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6960236_6962728_6962965_6963172
ES.17293.6	chr19	-	1066	5	NIC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_3	120.337805780229	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4755	False	NA	-1	True	GATAAA	-17	NA	6965022	6959840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963657_6963855_6964719
ES.17293.7	chr19	-	1248	7	NNC	ENSMUSG00000024962.14	novel	1158	7	NA	NA	-79	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	102.587631916436	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4679	False	NA	-2	True	GATAAA	-16	NA	6965098	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963398_6963463_6963657_6963855_6964141_6964185_6964719
ES.17293.8	chr19	-	1323	7	NNC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	96.7409197576473	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4736	False	NA	-2	True	GATAAA	-16	NA	6965041	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963636_6963855_6964141_6964185_6964719
ES.17293.9	chr19	-	1300	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	-63	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	99.8651090221204	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCTTCTGTCATTG	4695	False	NA	-2	True	GATAAA	-16	NA	6965082	6959841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964719
ES.17294.1	chr19	-	2069	5	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_2	109.907631673146	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9284	False	NA	-4	True	AATAAA	-17	NA	6969863	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6966138_6966394_6967234_6968085_6968200_6969526
ES.17294.10	chr19	-	2017	4	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	13	junction_3	98.1370923193106	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGATTCGGTCCTTCA	9920	False	NA	-5	True	AATAAA	-16	NA	6969965	6965279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6965477_6965556_6967234_6968085_6968180_6969916
ES.17294.12	chr19	-	4237	3	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	17	2	intron_retention	FALSE	non_canonical	0	0	junction_2	97.5	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCGATTCGGTCCTTC	9293	False	NA	-6	True	AATAAA	-15	NA	6969854	6965280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6966138_6966394
ES.17294.13	chr19	-	4657	1	Genic_Genomic	ENSMUSG00000024963.13	novel	NA	NA	NA	NA	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTCCGATTCGGTCCT	9946	False	NA	-8	True	AATAAA	-13	NA	6969939	6965282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_6965300_6969900
ES.17294.14	chr19	-	1141	5	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	21	-1	intron_retention	FALSE	canonical	3	188	junction_2	20.6942020865749	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTCCGATTCGGTCC	9297	False	NA	-9	True	AATAAA	-12	NA	6969850	6965283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6965477_6965556_6965644_6966790_6967234_6968085_6968180_6969526
ES.17294.15	chr19	-	1058	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	-59	1	21	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	6986	False	NA	-4	True	AATAAA	-16	NA	6973464	6970386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ES.17294.16	chr19	-	1463	5	NIC	ENSMUSG00000037349.10	novel	1000	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	112	junction_2	18.8679622641132	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	7053	False	NA	-4	True	AATAAA	-16	NA	6973397	6970386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6973104_6973375
ES.17294.17	chr19	-	1006	4	NIC	ENSMUSG00000037349.10	novel	1000	6	NA	NA	167	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	69.3028779264533	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	7212	False	NA	-4	True	AATAAA	-16	NA	6973238	6970386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6970571_6970800_6970895_6972038_6972138_6972609
ES.17294.2	chr19	-	5088	8	Fusion	ENSMUSG00000024963.13_ENSMUSG00000037349.10	novel	1074	6	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_3	77.1616379255063	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	6983	False	NA	-4	True	AATAAA	-17	NA	6973467	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6965477_6965556_6965644_6966790_6968180_6968262_6968373_6969526_6970571_6970800_6970895_6971029_6973104_6973375
ES.17294.3	chr19	-	773	6	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_5	82.0112187447547	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9945	False	NA	-4	True	AATAAA	-17	NA	6969940	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968200_6969916
ES.17294.4	chr19	-	927	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	86.5653253650418	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9945	False	NA	-4	True	AATAAA	-17	NA	6969940	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969853
ES.17294.5	chr19	-	1065	7	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.7327034862098	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9929	False	NA	-4	True	AATAAA	-17	NA	6969956	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6965640_6966790_6966956_6967048_6967234_6968085_6968180_6969526_6969764_6969853
ES.17294.6	chr19	-	883	7	NNC	ENSMUSG00000024963.13	novel	840	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	78.2788817838715	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9926	False	NA	-4	True	AATAAA	-17	NA	6969959	6965278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526_6969641_6969916
ES.17294.7	chr19	-	752	6	NIC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	77.5035483058679	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGATTCGGTCCTTCA	9945	False	NA	-5	True	AATAAA	-16	NA	6969940	6965279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969916
ES.17294.8	chr19	-	788	6	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	82.3883486908191	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGATTCGGTCCTTCA	9972	False	NA	-5	True	AATAAA	-16	NA	6969913	6965279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969853
ES.17294.9	chr19	-	2888	4	NNC	ENSMUSG00000024963.13	novel	1074	6	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	91.9238815542512	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCGATTCGGTCCTTCA	9296	False	NA	-5	True	AATAAA	-16	NA	6969851	6965279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6965477_6965556_6966138_6966394_6968180_6969526
ES.17295.1	chr19	+	2266	6	NIC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	25	junction_2	9.01997782702374	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGTTCCTCATCCGT	NA	False	NA	39	True	ATTAAA	-45	NA	6973532	6976415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6973893_6974063_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ES.17295.2	chr19	+	2346	5	NIC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	35	junction_3	6.21992765231236	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGTTCCTCATCC	NA	False	NA	37	True	ATTAAA	-43	NA	6973539	6976413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6973893_6974063_6975735_6975876_6975934_6976025_6976137_6976259
ES.17295.3	chr19	+	930	6	FSM	ENSMUSG00000047656.10	ENSMUST00000237234.2	972	6	42	0	1	0	multi-exon	FALSE	canonical	3	11	junction_2	13.8650640099496	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTGGTTCCTCATC	NA	False	NA	36	True	ATTAAA	-42	NA	6973540	6976412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ES.17295.4	chr19	+	3657	5	NIC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	1	1277	intron_retention	FALSE	canonical	3	25	junction_2	7.10633520177595	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCATCTATAGTGTGCC	NA	False	NA	NA	False	GATAAA	-44	NA	6973540	6977691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_6973893_6974063_6975471_6975559_6975735_6975876_6975934_6976025
ES.17295.5	chr19	+	3722	8	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	2	1689	intron_retention	FALSE	canonical	0	0	junction_6	16.9440857179231	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGGTGAGATGGCT	NA	False	NA	NA	False	AAGAAA	-1	NA	6973541	6978103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6973745_6973823_6973893_6974063_6975471_6975559_6975735_6975876_6975934_6976025_6976654_6976792_6976895_6977022
ES.17295.6	chr19	+	846	6	NNC	ENSMUSG00000047656.10	novel	972	6	NA	NA	11	-26	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	18.2581488656435	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAGAAAGTCCAGCTT	NA	False	NA	10	True	AATAAA	-32	NA	6973550	6976386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6973893_6974063_6974146_6975559_6975735_6975876_6975934_6976073_6976137_6976259
ES.17295.7	chr19	+	1032	7	NNC	ENSMUSG00000047656.10	novel	1103	7	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	14.8174071805952	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGATTTGTGGTTCC	NA	False	NA	31	True	ATTAAA	-37	NA	6973555	6976407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976073_6976137_6976259
ES.17296.1	chr19	+	179	1	Intergenic	novelGene_14376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1593	False	NA	NA	False	NA	NA	NA	6978105	6978284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6978100_6978300
ES.17297.1	chr19	+	176	1	Intergenic	novelGene_14377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCAG	4877	False	NA	NA	False	NA	NA	NA	6985506	6985682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_6985500_6985700
ES.17298.1	chr19	+	3023	1	Antisense	novelGene_ENSMUSG00000024966.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAAAGAAAGG	2019	False	NA	NA	False	NA	NA	NA	6998241	7001264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_6998200_7001300
ES.17299.1	chr19	-	2867	15	FSM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	-295	15	-295	-2	multi-exon	FALSE	canonical	0	0	junction_12	9.77945576717032	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTCCTCCTCTGGAA	5137	False	NA	-2	True	AATAAA	-23	NA	6997132	6976340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984_6992219_6996033_6996208_6996645
ES.17299.10	chr19	-	4704	8	Fusion	ENSMUSG00000024966.10_ENSMUSG00000024965.10	novel	2108	14	NA	NA	-9224	-633	intron_retention	TRUE	non_canonical	0	0	junction_1	1189.56924119273	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACGTTGACATTAAC	8120	False	NA	NA	False	NA	NA	NA	7006061	6994399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6995466_6995503_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995
ES.17299.11	chr19	-	7187	3	Fusion	ENSMUSG00000024966.10_ENSMUSG00000024965.10	novel	379	3	NA	NA	-5381	-633	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACGTTGACATTAAC	51	False	NA	NA	False	NA	NA	NA	7002218	6994399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_7001158_7001308_7001442_7001922
ES.17299.12	chr19	-	5781	14	FSM	ENSMUSG00000024966.10_ENSMUSG00000024965.10	ENSMUST00000025918.9	2108	14	-3	-3670	-3	-633	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACGTTGACATTAAC	3760	False	NA	NA	False	NA	NA	NA	7017338	6994399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.13	chr19	-	6687	10	Fusion	ENSMUSG00000024966.10_ENSMUSG00000024965.10	novel	2108	14	NA	NA	17	-633	intron_retention	FALSE	canonical	3	2912	junction_5	189.44369501318	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACGTTGACATTAAC	3780	False	NA	NA	False	NA	NA	NA	7017318	6994399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.14	chr19	-	2265	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-156	-1	-156	1	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTCTCCAGTGACTTTC	3607	False	NA	-7	True	AATAAA	-30	NA	7017491	6998068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.17	chr19	-	2077	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	913.352404816791	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3784	False	NA	-8	True	AATAAA	-29	NA	7017314	6998069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006593_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.18	chr19	-	3648	13	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	-27	0	intron_retention	FALSE	canonical	3	2912	junction_9	217.848316240656	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3736	False	NA	-8	True	AATAAA	-29	NA	7017362	6998069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.2	chr19	-	2213	9	NIC	ENSMUSG00000024965.10	novel	2587	15	NA	NA	5171	2	intron_retention	FALSE	canonical	3	15	junction_8	4.24264068711928	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTTCTTCCTCCTCT	7893	False	NA	-6	True	AATAAA	-19	NA	6991542	6976344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6976889_6977006_6977149_6979124_6979821_6979937_6980045_6980189_6980315_6980398_6980672_6980835_6980944_6991215_6991319_6991427
ES.17299.20	chr19	-	2229	13	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	32	0	intron_retention	FALSE	canonical	3	2912	junction_8	214.261311771916	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3795	False	NA	-8	True	AATAAA	-29	NA	7017303	6998069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.22	chr19	-	4161	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	914.822723474125	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3755	False	NA	-8	True	AATAAA	-29	NA	7017343	6998069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7004256_7004449_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.24	chr19	-	2089	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	906.677411759046	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3794	False	NA	-8	True	AATAAA	-29	NA	7017304	6998069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012851_7013074_7017247
ES.17299.26	chr19	-	2081	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	914.822723474125	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	3771	False	NA	-9	True	AATAAA	-28	NA	7017327	6998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003739_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.29	chr19	-	4437	8	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	8504	-1	intron_retention	FALSE	canonical	3	3068	junction_5	217.100183776795	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	5350	False	NA	-9	True	AATAAA	-28	NA	7008831	6998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7003757_7005995_7006117_7006269_7006373_7006475
ES.17299.3	chr19	-	765	3	NNC	ENSMUSG00000024965.10	novel	2856	14	NA	NA	19376	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	9.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTTCTTCCTCCTCT	8115	False	NA	-6	True	AATAAA	-19	NA	6977337	6976344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6976889_6977006_6977149_6977258
ES.17299.30	chr19	-	5327	13	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	26	-1	intron_retention	FALSE	canonical	3	3068	junction_6	177.981272423065	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	3789	False	NA	-9	True	AATAAA	-28	NA	7017309	6998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.31	chr19	-	2082	14	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	913.076637936577	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	3778	False	NA	-9	True	AATAAA	-28	NA	7017320	6998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010008_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.34	chr19	-	1829	13	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	939.979417623362	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGGTCTCCAGTGACTT	3765	False	NA	-9	True	AATAAA	-28	NA	7017333	6998070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012115_7017271
ES.17299.35	chr19	-	2640	13	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	-56	-2	intron_retention	FALSE	canonical	3	2912	junction_8	217.993310294911	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACGGTCTCCAGTGACT	3707	False	NA	-10	True	AATAAA	-27	NA	7017391	6998071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.36	chr19	-	6285	13	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	-5	2	-5	-2	intron_retention	FALSE	canonical	3	2912	junction_9	218.166348357293	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACGGTCTCCAGTGACT	3758	False	NA	-10	True	AATAAA	-27	NA	7017340	6998071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863
ES.17299.40	chr19	-	2068	13	NNC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	30	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	940.793500042503	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTACGGTCTCCAG	3793	False	NA	-15	True	AATAAA	-22	NA	7017305	6998076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6998540_6999017_6999191_6999394_6999499_7002648_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ES.17299.41	chr19	-	179	1	Intergenic	novelGene_14380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4938	False	NA	NA	False	NA	NA	NA	7009243	7009064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7009100_7009200
ES.17299.5	chr19	-	2157	5	NIC	ENSMUSG00000024965.10	novel	2988	14	NA	NA	15837	0	intron_retention	FALSE	canonical	3	18	junction_3	3.08220700148449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	6816	False	NA	-8	True	AATAAA	-17	NA	6980876	6976346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_6977149_6979124_6980045_6980189_6980449_6980536_6980672_6980835
ES.17299.6	chr19	-	2249	10	NNC	ENSMUSG00000024965.10	novel	2587	15	NA	NA	5110	0	intron_retention	FALSE	canonical	0	0	junction_7	7.98764478027175	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	7832	False	NA	-8	True	AATAAA	-17	NA	6991603	6976346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_6976889_6977006_6977149_6979124_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980737_6980835_6980944_6991215_6991319_6991427
ES.17299.8	chr19	-	176	1	Intergenic	novelGene_14378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	9268	False	NA	NA	False	NA	NA	NA	6986792	6986616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6986600_6986800
ES.17299.9	chr19	-	181	1	Intergenic	novelGene_14379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGCACGAGTGTGCA	-47	True	NA	NA	False	NA	NA	NA	6987739	6987558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_6987600_6987700
ES.173.1	chr1	+	1160	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	16	-8	16	8	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTCTATGTCTTTTC	NA	False	NA	25	True	AATAAA	-25	NA	21288814	21300399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
ES.173.10	chr1	+	6424	2	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16724	-198	3810	198	intron_retention	FALSE	canonical	3	69	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCGAACATTGTCATT	NA	False	NA	20	True	AATAAA	-26	NA	21327554	21335443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_21327607_21329071
ES.173.11	chr1	+	2690	3	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	18246	-191	5332	191	intron_retention	FALSE	canonical	3	69	junction_1	2	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGGAGTATTCGAACAT	NA	False	NA	13	True	AATAAA	-19	NA	21329076	21335436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_21329205_21330271_21330414_21333016
ES.173.2	chr1	+	4052	4	ISM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	25	2	25	1	intron_retention	FALSE	canonical	3	88	junction_3	2.94392028877595	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTCATTCATTTCT	NA	False	NA	15	True	AATAAA	-15	NA	21288823	21300389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815
ES.173.3	chr1	+	1964	11	Fusion	ENSMUSG00000025933.16_ENSMUSG00000025934.16	novel	1168	5	NA	NA	43	-4	multi-exon	FALSE	canonical	0	0	junction_5	34.1849382038347	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTTCTGGGGGAGGTGT	NA	False	NA	NA	False	NA	NA	NA	21288841	21335881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21319974_21320083_21327235_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ES.173.4	chr1	+	1084	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027064.8	1261	5	178	-1	178	1	multi-exon	FALSE	canonical	3	9	junction_4	35.5984550226551	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTCATTCATTTCT	NA	False	NA	15	True	AATAAA	-15	NA	21289063	21300389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299631
ES.173.5	chr1	+	1085	7	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	-5291	189	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	30.7064958744707	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTGGAGTATTCGAAC	NA	False	NA	11	True	AATAAA	-17	NA	21318453	21335434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21318604_21319974_21320083_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ES.173.6	chr1	+	2407	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3273	-102	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	29.131426329653	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATACAGAACTGGACATT	NA	False	NA	NA	False	AATAAA	-23	NA	21327017	21335783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21327270_21327554_21327607_21329071_21330184_21330271_21330414_21333016_21333149_21335066
ES.173.7	chr1	+	1014	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3340	191	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGGAGTATTCGAACAT	NA	False	NA	13	True	AATAAA	-19	NA	21327084	21335436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ES.173.8	chr1	+	872	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3531	198	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.8644324286721	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCGAACATTGTCATT	NA	False	NA	20	True	AATAAA	-26	NA	21327275	21335443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_21327312_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ES.173.9	chr1	+	1016	5	ISM	ENSMUSG00000025934.16	ENSMUST00000121676.8	894	8	16535	-189	3621	189	3prime_fragment	FALSE	canonical	3	69	junction_1	2	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTGGAGTATTCGAAC	NA	False	NA	11	True	AATAAA	-17	NA	21327365	21335434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
ES.1730.2	chr1	-	2894	6	NIC	ENSMUSG00000043467.20	novel	3084	7	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	1.93907194296653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAACAGCGCATCTGGTT	NA	False	NA	NA	False	TATAAA	-14	NA	160862370	160836367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160837062_160847053_160847977_160857211_160857312_160859374_160860332_160861657_160861855_160862347
ES.1730.3	chr1	-	1906	1	ISM	ENSMUSG00000043467.20	ENSMUST00000162226.9	18814	5	24146	5876	23556	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAACAGCGCATCTGGTT	4375	False	NA	NA	False	TATAAA	-14	NA	160838273	160836367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160836400_160838300
ES.1730.4	chr1	-	2982	5	FSM	ENSMUSG00000043467.20	ENSMUST00000159250.9	2473	5	43	-552	11	552	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTGACTCCAAGAGCTA	NA	False	NA	NA	False	CATAAA	-15	NA	160862375	160846276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160847977_160857211_160857312_160859374_160860332_160861657_160861855_160862347
ES.1730.5	chr1	-	4130	4	NIC	ENSMUSG00000043467.20	novel	2473	5	NA	NA	-4	-214	intron_retention	FALSE	canonical	2	3	junction_3	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATCAATGACTCATTTAT	NA	False	NA	NA	False	AAAAAG	-16	NA	160862390	160847206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160847977_160857211_160860332_160861657_160861855_160862347
ES.1730.6	chr1	-	2229	5	FSM	ENSMUSG00000043467.20	ENSMUST00000159250.9	2473	5	-137	381	-136	-217	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGATCAATGACTCATT	NA	False	NA	NA	False	AAAAAG	-13	NA	160862555	160847209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160847977_160857211_160857312_160859374_160860332_160861657_160861855_160862347
ES.17300.1	chr19	-	255	1	Intergenic	novelGene_14381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCCAGTCTGCTTTTAT	9096	False	NA	NA	False	NA	NA	NA	7030894	7030639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7030600_7030900
ES.17301.1	chr19	+	2500	9	ISM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-104	-904	-104	904	intron_retention	FALSE	canonical	3	47	junction_6	6.01560470775798	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAGAAAGAAAACC	8428	False	NA	NA	False	NA	NA	NA	7034073	7176326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896
ES.17301.10	chr19	+	1248	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-16	-4	-16	4	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTGGGTCTGGCTGGG	8516	False	NA	10	True	AATAAA	-20	NA	7034161	7175426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
ES.17301.11	chr19	+	5198	8	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	80748	4350	intron_retention	FALSE	canonical	0	0	junction_1	19.9775384073295	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTGGTTTGTATCTG	NA	False	NA	NA	False	NA	NA	NA	7114925	7179772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7114962_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066
ES.17301.12	chr19	+	1689	1	Intergenic	novelGene_14382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7116454	7118143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7116500_7118100
ES.17301.13	chr19	+	195	1	Intergenic	novelGene_14383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTGTTTTTCTTGTA	NA	False	NA	29	True	NA	NA	NA	7147520	7147715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7147500_7147700
ES.17301.2	chr19	+	2422	10	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-57	7098	intron_retention	FALSE	canonical	0	0	junction_9	17.9677351431069	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	8475	False	NA	NA	False	NA	NA	NA	7034120	7182520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7181203
ES.17301.3	chr19	+	1177	2	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-51	-135874	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGCATCTGACTTGAT	8481	False	NA	NA	False	AATAAA	-16	NA	7034126	7039548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7034551_7038795
ES.17301.4	chr19	+	1639	4	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-45	-129552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.3536509852382	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCATTAGCCGTGAATAA	8487	False	NA	NA	False	ATTAAA	-19	NA	7034132	7045870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7034551_7042832_7042935_7043454_7043572_7044868
ES.17301.5	chr19	+	834	2	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-20	-135881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTAAGTTTGCATCTG	8512	False	NA	NA	False	AATAAA	-9	NA	7034157	7039541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7034551_7039100
ES.17301.6	chr19	+	1428	10	ISM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-18	-6	-18	6	intron_retention	FALSE	canonical	3	30	junction_9	9.49983755546625	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGTCTGGCTGGGTT	8514	False	NA	12	True	AATAAA	-22	NA	7034159	7175428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066
ES.17301.7	chr19	+	1514	9	ISM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	-18	-4	-18	4	intron_retention	FALSE	canonical	3	47	junction_6	6.01560470775798	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTGGGTCTGGCTGGG	8514	False	NA	10	True	AATAAA	-20	NA	7034159	7175426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896
ES.17301.8	chr19	+	1217	10	NIC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-18	6	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	15.0185071014251	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGTCTGGCTGGGTT	8514	False	NA	12	True	AATAAA	-22	NA	7034159	7175428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175277
ES.17301.9	chr19	+	2194	5	NNC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-18	-3218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.3156328315757	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAGATAGAATA	8514	False	NA	NA	False	NA	NA	NA	7034159	7172204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7164349_7172028
ES.17302.1	chr19	-	2768	1	FSM	ENSMUSG00000117901.2	ENSMUST00000236559.2	953	1	-1811	-4	-1811	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATCTCTGCTGCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	7067597	7064829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7064800_7067600
ES.17303.1	chr19	-	3371	1	Genic_Genomic	ENSMUSG00000047787.9	novel	NA	NA	NA	NA	-3247	-13605	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAAAAACAAAA	8522	False	NA	NA	False	NA	NA	NA	7086341	7082970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_7083000_7086300
ES.17304.1	chr19	-	178	1	Intergenic	novelGene_14384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	7150442	7150264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7150300_7150400
ES.17305.10	chr19	-	1089	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	32	592	32	-584	multi-exon	FALSE	canonical	3	1089	junction_1	76.373351955305	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGCTGTCC	NA	False	NA	2	True	NA	NA	NA	7183649	7176158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.11	chr19	-	1156	6	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-38	-637	intron_retention	FALSE	canonical	3	1098	junction_1	74.5101335390026	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183637	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.12	chr19	-	1001	7	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-36	-637	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	442.856040065191	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183635	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7176605_7176736_7176911_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.13	chr19	-	3105	4	NIC	ENSMUSG00000024767.12	novel	1728	7	NA	NA	40	-637	intron_retention	FALSE	canonical	3	1098	junction_1	64.1681818002938	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183641	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176932_7177027_7177427_7181422_7181522_7181754
ES.17305.14	chr19	-	2803	4	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-98	-637	intron_retention	FALSE	canonical	3	1089	junction_1	42.3503902645012	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183238	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177427_7181422
ES.17305.15	chr19	-	1112	7	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-30	-637	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	430.412076451806	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183170	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183011
ES.17305.17	chr19	-	5250	5	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-35	-637	intron_retention	FALSE	canonical	3	1089	junction_1	77.7640662517078	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183634	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7181817_7183566
ES.17305.18	chr19	-	1117	8	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	40	-637	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	519.525175678008	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGAGTGTGCGCTTCCC	NA	False	NA	-8	True	ATTAAA	-17	NA	7183641	7176211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181149_7181239_7181422_7181522_7181754_7181817_7183566
ES.17305.19	chr19	-	954	7	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	40	-639	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	431.084066305196	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCGAGTGTGCGCTTC	NA	False	NA	-10	True	ATTAAA	-15	NA	7183641	7176213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7176605_7176736_7176860_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.2	chr19	-	1865	6	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	40	-3	intron_retention	FALSE	canonical	3	1089	junction_1	77.0246713722298	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGTCTGGCCCATGC	NA	False	NA	-1	True	AATAAA	-23	NA	7183641	7175569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.3	chr19	-	1690	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	20	3	20	-3	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGTCTGGCCCATGC	NA	False	NA	-1	True	AATAAA	-23	NA	7183661	7175569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.4	chr19	-	1380	8	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	414.326303430383	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGTCTGGCCCATG	NA	False	NA	-2	True	AATAAA	-22	NA	7183637	7175570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7175604_7175888_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.5	chr19	-	1854	7	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-132	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	430.412076451806	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCTGTCTGGCCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	7183272	7175571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183011
ES.17305.6	chr19	-	1577	1	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	680	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCTGTCTGGCCCA	NA	False	NA	-4	True	AATAAA	-20	NA	7177149	7175572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7175600_7177100
ES.17305.7	chr19	-	5659	6	NIC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-40	0	intron_retention	FALSE	canonical	3	1089	junction_1	83.279289142019	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCTGTCTGGCC	NA	False	NA	-6	True	AATAAA	-18	NA	7183639	7175574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7181522_7181754_7181817_7183566
ES.17305.8	chr19	-	1596	7	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	431.084066305196	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTCTGCTGTCTGGC	NA	False	NA	-7	True	AATAAA	-17	NA	7183645	7175575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7176605_7176736_7176860_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ES.17305.9	chr19	-	3317	6	NNC	ENSMUSG00000024767.12	novel	1713	7	NA	NA	-120	-1	intron_retention	FALSE	canonical	3	19	junction_4	553.485681838293	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCTCTGCTGTCTGGC	NA	False	NA	-7	True	AATAAA	-17	NA	7183260	7175575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7176605_7176736_7176932_7177027_7177427_7181149_7181239_7181422_7181522_7181754
ES.17306.1	chr19	+	190	1	Intergenic	novelGene_14385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	7187643	7187833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7187600_7187800
ES.17307.1	chr19	+	176	1	Intergenic	novelGene_14386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7188392	7188568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7188400_7188600
ES.17308.1	chr19	+	226	1	Intergenic	novelGene_14387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	7190064	7190290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7190100_7190300
ES.17308.2	chr19	+	329	1	Intergenic	novelGene_14388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	7190066	7190395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7190100_7190400
ES.17309.1	chr19	-	567	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	-20	3	-20	-3	multi-exon	FALSE	canonical	3	12296	junction_1	0	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATCATGTCCTTCTG	7346	False	NA	NA	False	AATAAA	-23	NA	7195001	7192520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7192850_7194763
ES.17309.2	chr19	-	2418	1	NIC	ENSMUSG00000035885.6	novel	550	2	NA	NA	-32	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCATCATGTCCTTC	7407	False	NA	NA	False	AATAAA	-21	NA	7194940	7192522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7192500_7194900
ES.17309.3	chr19	-	1578	1	NIC	ENSMUSG00000035885.6	novel	550	2	NA	NA	29	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	792	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	7395	False	NA	NA	False	NA	NA	NA	7194952	7193374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7193400_7195000
ES.1731.1	chr1	-	6243	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	15	-2639	-1	2639	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTCATTTTATTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	160898213	160865531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.10	chr1	-	2783	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-61	897	-61	1	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTTCCTGTTTTC	NA	False	NA	-9	True	AATGAA	-33	NA	160898289	160869067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.11	chr1	-	2153	17	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	129.887932464875	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	False	NA	-10	True	AATGAA	-32	NA	160898207	160869068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892865_160896649_160896750_160898112
ES.1731.12	chr1	-	2912	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	321	junction_4	41.5333868378468	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	False	NA	-10	True	AATGAA	-32	NA	160898231	160869068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.13	chr1	-	1752	14	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	1488	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_5	143.829287369873	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	False	NA	-10	True	AATGAA	-32	NA	160896689	160869068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.14	chr1	-	2659	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	101.925768195399	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGAGTCTTCCTGTTTT	NA	False	NA	-10	True	AATGAA	-32	NA	160898229	160869068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.15	chr1	-	3560	16	ISM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-27	899	-27	-1	intron_retention	FALSE	canonical	3	321	junction_5	43.1723162326147	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGAGTCTTCCTGTTT	NA	False	NA	-11	True	AATGAA	-31	NA	160898255	160869069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.16	chr1	-	3725	15	FSM	ENSMUSG00000026709.11	ENSMUST00000162654.8	4015	15	-20	310	-4	-1	multi-exon	FALSE	canonical	3	321	junction_4	42.9292845198677	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGAGTCTTCCTGTTT	NA	False	NA	-11	True	AATGAA	-31	NA	160898232	160869069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.17	chr1	-	2488	18	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	152.222406036871	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTAGAGTCTTCCTGTT	NA	False	NA	-12	True	AATGAA	-30	NA	160898202	160869070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160895852_160895942_160896649_160896750_160897856
ES.1731.18	chr1	-	2955	16	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	103.963369617487	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTAGAGTCTTCCTGT	NA	False	NA	-13	True	AATGAA	-29	NA	160898222	160869071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887559_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.2	chr1	-	5881	18	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	1	2635	intron_retention	TRUE	non_canonical	0	0	junction_1	99.5873492889951	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTATCTTCATTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	160898211	160865535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160866242_160866597_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.22	chr1	-	2641	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	102.570214433279	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTGAGTATTTAG	NA	False	NA	-24	True	AATGAA	-18	NA	160898229	160869082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160896649_160896750_160897562
ES.1731.24	chr1	-	3304	15	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	8	-8	intron_retention	FALSE	canonical	2	15	junction_7	106.019179050446	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTGAGTATTTAG	NA	False	NA	-24	True	AATGAA	-18	NA	160898192	160869082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.25	chr1	-	3397	15	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_9	109.160712825127	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTGAGTATTTAG	NA	False	NA	-24	True	AATGAA	-18	NA	160898212	160869082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.3	chr1	-	5524	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	14	-1919	-2	1919	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTTGTGCTTATAAG	NA	False	NA	NA	False	NA	NA	NA	160898214	160866251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.30	chr1	-	2728	17	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.042557757781	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTGAGTATTTAG	NA	False	NA	-24	True	AATGAA	-18	NA	160898222	160869082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873074_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.32	chr1	-	2224	18	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-1	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	99.587349288995	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAT	NA	False	NA	-43	True	NA	NA	NA	160898213	160869101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562_160897664_160898112
ES.1731.33	chr1	-	2501	15	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	-27	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	108.818633045812	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAT	NA	False	NA	-43	True	NA	NA	NA	160898212	160869101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.34	chr1	-	2070	17	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	1	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	102.610592015396	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAT	NA	False	NA	-43	True	NA	NA	NA	160898211	160869101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896774_160898187
ES.1731.35	chr1	-	2492	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	-27	combination_of_known_splicesites	FALSE	canonical	2	15	junction_7	102.476143565222	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAT	NA	False	NA	-43	True	NA	NA	NA	160898212	160869101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.36	chr1	-	6825	13	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	-27	intron_retention	FALSE	canonical	2	5	junction_12	113.546857679501	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAAAT	NA	False	NA	-43	True	NA	NA	NA	160898212	160869101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160896649
ES.1731.38	chr1	-	2550	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	6	1063	4	-159	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTAGAACCAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	160898222	160869233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.39	chr1	-	3505	15	NNC	ENSMUSG00000026709.11	novel	2126	14	NA	NA	-4	1497	intron_retention	TRUE	non_canonical	0	0	junction_1	100.832377574601	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGAAATTGCTTTCCCA	NA	False	NA	NA	False	AATAAA	-26	NA	160898232	160871255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160871873_160872045_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.4	chr1	-	5286	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	8	-1675	6	1675	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTGTGACTGTACTCC	NA	False	NA	NA	False	NA	NA	NA	160898220	160866495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.40	chr1	-	3419	14	NNC	ENSMUSG00000026709.11	novel	2126	14	NA	NA	-1	1493	intron_retention	TRUE	non_canonical	0	0	junction_1	136.73548082329	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATGTGAAATTGCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	160898213	160871259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160871875_160872047_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.41	chr1	-	177	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAG	2604	False	NA	NA	False	NA	NA	NA	160876058	160875881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160875900_160876100
ES.1731.42	chr1	-	177	2	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	160992611	160875881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160875954_160992506
ES.1731.43	chr1	-	2564	7	ISM	ENSMUSG00000026709.11	ENSMUST00000160591.8	2126	14	-56	13505	-5	3751	5prime_fragment	FALSE	canonical	3	329	junction_2	38.3771488721551	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGATATTTATTCAATC	NA	False	NA	NA	False	NA	NA	NA	160898233	160886257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.44	chr1	-	3794	1	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	988	3751	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGATATTTATTCAATC	NA	False	NA	NA	False	NA	NA	NA	160890051	160886257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_160886300_160890100
ES.1731.45	chr1	-	3366	6	ISM	ENSMUSG00000026709.11	ENSMUST00000160591.8	2126	14	-45	13505	4	3751	intron_retention	FALSE	canonical	3	329	junction_2	41.9733248623456	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGATATTTATTCAATC	NA	False	NA	NA	False	NA	NA	NA	160898222	160886257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ES.1731.46	chr1	-	172	1	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGTATATTATCT	NA	False	NA	NA	False	NA	NA	NA	160895404	160895232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160895200_160895400
ES.1731.47	chr1	-	178	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAAGAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	160895596	160895418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160895400_160895600
ES.1731.48	chr1	-	4073	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTGGATTTTTT	NA	False	NA	3	True	AATAAA	-37	NA	160959082	160915944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.49	chr1	-	4013	12	NNC	ENSMUSG00000026705.17	novel	4072	12	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_9	28.9453746001637	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTGGATTTTTT	NA	False	NA	3	True	AATAAA	-37	NA	160959004	160915944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934454_160936791_160937366_160957958_160958023_160958932
ES.1731.5	chr1	-	3612	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	-4	11	-4	-11	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTGTGTAGCCCTGC	NA	False	NA	NA	False	NA	NA	NA	160898232	160868181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.50	chr1	-	1123	2	ISM	ENSMUSG00000026705.17	ENSMUST00000117467.7	3195	13	41139	-2	5335	2	3prime_fragment	FALSE	canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTGTGTTGGATTT	NA	False	NA	0	True	AATAAA	-34	NA	160917859	160915947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160916695_160917483
ES.1731.51	chr1	-	4811	11	FSM	ENSMUSG00000026705.17	ENSMUST00000140905.8	4817	11	3	3	3	2	multi-exon	FALSE	canonical	3	70	junction_3	13.23064624272	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTGTGTTGGATTT	NA	False	NA	0	True	AATAAA	-34	NA	160959078	160915947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.52	chr1	-	4013	12	NNC	ENSMUSG00000026705.17	novel	4072	12	NA	NA	-10	7	intron_retention	FALSE	non_canonical	0	0	junction_10	26.6576086544452	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTTTTAAAGTTT	NA	False	NA	-13	True	AATAAA	-21	NA	160959022	160915960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937382_160957958_160958023_160958932
ES.1731.54	chr1	-	4080	13	NNC	ENSMUSG00000026705.17	novel	3195	13	NA	NA	7	2	intron_retention	FALSE	canonical	0	0	junction_10	33.7518518010494	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTTTAATTTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	160959005	160915965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160950586_160950692_160957958_160958023_160958932
ES.1731.56	chr1	-	3742	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	49	281	-20	-258	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTATAGTCACAGACTG	NA	False	NA	NA	False	AATAAA	-28	NA	160959032	160916225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.57	chr1	-	2411	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	47	1614	-22	-1591	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACCTATGTGTGACCT	NA	False	NA	NA	False	TTTAAA	-16	NA	160959034	160917558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.58	chr1	-	2105	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	17	1950	17	-1927	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGTGCCTCAACATTCAG	NA	False	NA	NA	False	AATAGA	-17	NA	160959064	160917894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.59	chr1	-	211	1	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCTGAACAGGAGTG	NA	False	NA	NA	False	AATACA	-14	NA	160921917	160921706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160921700_160921900
ES.1731.6	chr1	-	3808	15	NNC	ENSMUSG00000026709.11	novel	2838	15	NA	NA	-5	-14	intron_retention	FALSE	canonical	1	7	junction_14	138.469108026126	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTCTCTGTGTAGCCC	NA	False	NA	NA	False	NA	NA	NA	160898233	160868184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897489
ES.1731.60	chr1	-	1708	9	ISM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	16	9783	16	-1713	5prime_fragment	FALSE	canonical	3	82	junction_5	11.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATACTTTCAATATAACG	NA	False	NA	NA	False	ATTAAA	-43	NA	160959065	160925727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.61	chr1	-	2080	8	FSM	ENSMUSG00000026705.17	ENSMUST00000148952.8	4182	8	14	2088	14	1586	multi-exon	FALSE	canonical	3	82	junction_4	11.5387545750335	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGTATGTGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	160959067	160926102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.62	chr1	-	1936	8	FSM	ENSMUSG00000026705.17	ENSMUST00000148952.8	4182	8	43	2203	-26	1471	multi-exon	FALSE	canonical	3	82	junction_4	11.5387545750335	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTCTTCATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	160959038	160926217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ES.1731.63	chr1	-	3632	2	Antisense	novelGene_ENSMUSG00000044835.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACCGTTTCTCATGAGT	NA	False	NA	NA	False	NA	NA	NA	160978820	160973201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_160976524_160978510
ES.1731.64	chr1	-	5214	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACCGTTTCTCATGAG	NA	False	NA	NA	False	NA	NA	NA	160978416	160973202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_160973200_160978400
ES.1731.65	chr1	-	2699	1	Genic_Genomic	ENSMUSG00000049160.16	novel	NA	NA	NA	NA	-1595	-1368	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAACAAAAAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	160988479	160985780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_160985800_160988500
ES.1731.7	chr1	-	3013	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	14	592	-2	-3	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTGGCTGTCTCACAG	NA	False	NA	NA	False	NA	NA	NA	160898214	160868762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.8	chr1	-	2920	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	5	694	3	-105	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTACAAGTA	NA	False	NA	NA	False	AATATA	-26	NA	160898223	160868864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ES.1731.9	chr1	-	2805	17	NNC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_16	101.065495471996	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGTTTTCCAAGCAT	NA	False	NA	-2	True	AATGAA	-40	NA	160898231	160869060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897489
ES.17310.1	chr19	-	205	1	Intergenic	novelGene_14389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCAGATCCCAACA	10008	False	NA	NA	False	NA	NA	NA	7196273	7196068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7196100_7196300
ES.17311.1	chr19	-	381	1	Intergenic	novelGene_14390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9252	False	NA	NA	False	NA	NA	NA	7197029	7196648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7196600_7197000
ES.17311.2	chr19	-	176	1	Intergenic	novelGene_14391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9252	False	NA	NA	False	NA	NA	NA	7197029	7196853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7196900_7197000
ES.17312.1	chr19	+	80	1	Intergenic	novelGene_14392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCTTTTTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	7198599	7198679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7198600_7198700
ES.17313.1	chr19	-	3320	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	-58	-31	-58	26	multi-exon	TRUE	canonical	3	441	junction_1	30.7431757816732	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGCAGTGGGTGTCAGG	NA	False	NA	11	True	NA	NA	NA	7218606	7203006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.10	chr19	-	3375	7	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_3	225.033083987419	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218404	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207649_7211175_7211241_7211468_7211522_7212427_7212524_7218302
ES.17313.11	chr19	-	3263	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	441	junction_1	32.9123414879924	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218438	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.12	chr19	-	4690	3	ISM	ENSMUSG00000024764.11	ENSMUST00000236628.2	3993	7	9120	5	9120	0	intron_retention	FALSE	canonical	3	441	junction_1	27.5	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	8313	False	NA	-20	True	AATAAA	-16	NA	7209279	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7205457_7205716_7205795_7207086
ES.17313.13	chr19	-	4433	4	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	38	0	intron_retention	FALSE	canonical	3	479	junction_3	27.5237271377907	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218361	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205795_7207086_7207649_7211468_7212524_7218302
ES.17313.14	chr19	-	2895	7	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	185.625743545088	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218447	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207628_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.15	chr19	-	2947	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	182.726571685675	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218360	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7218302
ES.17313.16	chr19	-	3318	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	441	junction_1	30.998655884839	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218554	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.17	chr19	-	3086	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	179.745576363432	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218562	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.18	chr19	-	3270	9	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	211.890854864008	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218442	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212611_7216129_7216188_7218302
ES.17313.19	chr19	-	5551	2	ISM	ENSMUSG00000024764.11	ENSMUST00000236769.2	3324	7	8540	-39	8518	-1	intron_retention	FALSE	canonical	3	496	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	7711	False	NA	-21	True	AATAAA	-15	NA	7209881	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7205795_7207086
ES.17313.2	chr19	-	3511	7	FSM	ENSMUSG00000024764.11	ENSMUST00000236769.2	3324	7	-127	-60	0	15	multi-exon	FALSE	canonical	3	457	junction_3	27.2605738914075	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGGTGCCATGGGCAG	NA	False	NA	0	True	AATAAA	-36	NA	7218548	7203017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.20	chr19	-	3030	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	175.781508950427	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218401	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7212427_7212524_7218302
ES.17313.21	chr19	-	3171	9	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	204.903902781279	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218424	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211175_7211241_7211468_7211522_7212427_7212524_7218302
ES.17313.22	chr19	-	3305	6	NNC	ENSMUSG00000024764.11	novel	1569	6	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_5	200.47204293866	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218415	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218317
ES.17313.23	chr19	-	3876	6	NIC	ENSMUSG00000024764.11	novel	3993	7	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	16	junction_3	192.465477423875	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218447	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7212524_7218302
ES.17313.24	chr19	-	3199	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	171.373800774321	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218540	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205772_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.25	chr19	-	3070	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	166.902635676967	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218403	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211483_7211522_7212427_7212524_7218302
ES.17313.26	chr19	-	3031	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	172.407206629999	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218355	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212518_7218302
ES.17313.27	chr19	-	3196	9	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	211.890854864008	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218367	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7214258_7214406_7218302
ES.17313.28	chr19	-	3682	5	NIC	ENSMUSG00000024764.11	novel	1569	6	NA	NA	31	-1	intron_retention	FALSE	canonical	3	479	junction_4	24.1764348074732	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	False	NA	-21	True	AATAAA	-15	NA	7218517	7203038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.29	chr19	-	3142	7	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	185.625743545088	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTGGGATGGCATCC	NA	False	NA	-22	True	AATAAA	-14	NA	7218539	7203039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207471_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.3	chr19	-	3367	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	-37	-1761	-35	0	multi-exon	FALSE	canonical	3	441	junction_1	33.2060235499525	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGGCATCCAGATACT	NA	False	NA	-15	True	AATAAA	-21	NA	7218456	7203032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.30	chr19	-	3113	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.715695483001	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGCTGGGATGGCATC	NA	False	NA	-23	True	AATAAA	-13	NA	7218427	7203040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205463_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.32	chr19	-	9087	5	ISM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	14	-1753	-6	-3	intron_retention	FALSE	canonical	3	441	junction_1	36.4725924496738	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGCTGGGATGGCATC	NA	False	NA	-23	True	AATAAA	-13	NA	7218405	7203040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427
ES.17313.33	chr19	-	3213	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	171.304240628021	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGCTGGGATGGCATC	NA	False	NA	-23	True	AATAAA	-13	NA	7218539	7203040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211516_7212427_7212524_7218302
ES.17313.34	chr19	-	4178	7	NNC	ENSMUSG00000024764.11	novel	3993	7	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_5	175.781508950427	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTTATTTGTATGTCA	NA	False	NA	-5	True	NA	NA	NA	7218532	7203080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207749_7211468_7212524_7218302
ES.17313.35	chr19	-	5125	4	ISM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	4637	-1508	4617	-208	intron_retention	FALSE	canonical	3	441	junction_1	42.0819306696935	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTTGTTTTAGTGAAC	3810	False	NA	NA	False	TTTAAA	-5	NA	7213782	7203285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468
ES.17313.36	chr19	-	2990	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	-8	249	-8	-209	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTTTGTTTTAGTGAA	NA	False	NA	NA	False	TTTAAA	-4	NA	7218556	7203286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.37	chr19	-	1639	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	59	1533	59	223	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTTCTCACACCTC	NA	False	NA	NA	False	NA	NA	NA	7218489	7204570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.38	chr19	-	1392	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	13	1826	13	-70	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGACCTTGGACATCT	NA	False	NA	NA	False	NA	NA	NA	7218535	7204863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ES.17313.39	chr19	-	5763	1	FSM	ENSMUSG00000024764.11	ENSMUST00000235323.2	4520	1	-67	-1176	62	1176	mono-exon	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTGGTCTGGGGCCA	NA	False	NA	NA	False	NA	NA	NA	7218486	7212723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7212700_7218500
ES.17313.4	chr19	-	3191	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	171.304240628021	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGGCATCCAGATACT	NA	False	NA	-15	True	AATAAA	-21	NA	7218533	7203032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212457_7212524_7218302
ES.17313.40	chr19	-	4563	1	FSM	ENSMUSG00000024764.11	ENSMUST00000235323.2	4520	1	-8	-35	-6	35	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTACGTGCATTTCTCAG	NA	False	NA	NA	False	NA	NA	NA	7218427	7213864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7213900_7218400
ES.17313.41	chr19	-	4107	1	FSM	ENSMUSG00000024764.11	ENSMUST00000235323.2	4520	1	-149	562	-20	-562	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGCTAAGTGGTTGCC	NA	False	NA	NA	False	AAAAAG	-17	NA	7218568	7214461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7214500_7218600
ES.17313.5	chr19	-	4005	7	FSM	ENSMUSG00000024764.11	ENSMUST00000236628.2	3993	7	-14	2	6	-2	multi-exon	FALSE	canonical	3	441	junction_1	32.7078821624934	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGATGGCATCCAGATA	NA	False	NA	-17	True	AATAAA	-19	NA	7218413	7203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7212524_7218302
ES.17313.7	chr19	-	3202	8	NNC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	166.902635676967	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGGATGGCATCCAGA	NA	False	NA	-19	True	AATAAA	-17	NA	7218418	7203036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207749_7211468_7211522_7212427_7212524_7218302
ES.17313.9	chr19	-	4354	5	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	441	junction_1	36.9932426261878	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218542	7203037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7212524_7218302
ES.17314.1	chr19	-	180	1	Intergenic	novelGene_14393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTATGTTATTATTT	8267	False	NA	-6	True	NA	NA	NA	7224725	7224545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7224500_7224700
ES.17315.1	chr19	+	161	1	Intergenic	novelGene_14394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATCTAAAA	3269	False	NA	NA	False	NA	NA	NA	7225142	7225303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7225100_7225300
ES.17316.1	chr19	-	178	1	Intergenic	novelGene_14395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATCTAATGCCAG	4683	False	NA	NA	False	NA	NA	NA	7228309	7228131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7228100_7228300
ES.17317.1	chr19	-	129	1	Intergenic	novelGene_14396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATTGTCA	2580	False	NA	NA	False	NA	NA	NA	7238641	7238512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7238500_7238600
ES.17318.1	chr19	+	2421	13	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-882	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.162617877285	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7243807	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7243979_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.10	chr19	+	2948	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-52	-2	intron_retention	FALSE	canonical	3	1016	junction_10	64.5169745105891	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTCTTCCATGTGTG	NA	False	NA	19	True	AATAAA	-14	NA	7245591	7252587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.12	chr19	+	2899	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	320.843155729575	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245593	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247102_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.13	chr19	+	2713	13	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.162617877285	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245593	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246124_7246282_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.14	chr19	+	4887	9	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-37	0	intron_retention	FALSE	canonical	3	1016	junction_8	65.2733435255158	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245606	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247972_7248062_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.16	chr19	+	3307	10	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	1016	junction_9	72.0140589840486	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245620	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.18	chr19	+	4371	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1016	junction_10	59.0680962957162	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245640	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.19	chr19	+	2811	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	319.90192195331	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245647	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250470_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.2	chr19	+	2418	13	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	300.802676184904	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7244622	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.20	chr19	+	2774	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	325.163582481035	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245648	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248418_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.21	chr19	+	4147	9	NNC	ENSMUSG00000024968.15	novel	2013	11	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	364.982854905542	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245648	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250461_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.22	chr19	+	3454	11	NNC	ENSMUSG00000024968.15	novel	2013	11	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_1	433.893869511889	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245649	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7247187_7247467_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248885_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.23	chr19	+	2798	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	324.264431425347	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245651	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247957_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.24	chr19	+	2919	13	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	417.776821068645	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTCTTCCATGTGTG	NA	False	NA	19	True	AATAAA	-14	NA	7245651	7252587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247628_7247736_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.25	chr19	+	2905	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	1016	junction_10	68.8494008688529	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245651	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.26	chr19	+	3015	10	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	8	-2	intron_retention	FALSE	canonical	3	1032	junction_6	64.1389309946448	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTCTTCCATGTGTG	NA	False	NA	19	True	AATAAA	-14	NA	7245651	7252587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384
ES.17318.27	chr19	+	4233	10	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_5	350.718662530116	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245651	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.29	chr19	+	4466	10	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1016	junction_9	61.8889886294828	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245653	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.3	chr19	+	3879	12	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	15	-1	intron_retention	FALSE	canonical	3	42	junction_1	308.023692337655	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7244704	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7244790_7246215_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.30	chr19	+	2882	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	319.90192195331	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245654	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248991_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.31	chr19	+	3365	9	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1032	junction_5	68.2521748737723	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245655	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384
ES.17318.32	chr19	+	2619	13	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	312.162617877285	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245668	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707_7252258_7252435
ES.17318.33	chr19	+	2851	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	432.073742558217	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245669	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247628_7247736_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.34	chr19	+	5012	10	NIC	ENSMUSG00000024968.15	novel	2013	11	NA	NA	28	-3	intron_retention	FALSE	canonical	3	1016	junction_9	61.400325732035	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTCTTCCATGTGT	NA	False	NA	18	True	AATAAA	-13	NA	7245671	7252586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.35	chr19	+	2786	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	326.042612435809	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTCTTCCATGTGTG	NA	False	NA	19	True	AATAAA	-14	NA	7245671	7252587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251713
ES.17318.37	chr19	+	2890	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	28	-2	intron_retention	FALSE	canonical	3	1016	junction_10	68.840104590275	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTCTTCCATGTGTG	NA	False	NA	19	True	AATAAA	-14	NA	7245671	7252587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.38	chr19	+	2756	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	313.395322395172	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7245674	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248885_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.39	chr19	+	4353	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	31	-1561	31	1561	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTCTGTGCAACCGCA	NA	False	NA	NA	False	AATAAA	-20	NA	7245674	7254151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.4	chr19	+	4401	11	FSM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	-2388	0	51	0	multi-exon	FALSE	canonical	3	1016	junction_10	67.7507195533745	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7244740	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.40	chr19	+	2596	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	415	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	325.118389117178	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7246058	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247736_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.41	chr19	+	2186	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	615	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	319.90192195331	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7246258	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248899_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.42	chr19	+	2233	10	NNC	ENSMUSG00000024968.15	novel	2013	11	NA	NA	673	0	intron_retention	FALSE	canonical	2	5	junction_3	465.360420521185	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7246316	7252589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247102_7247187_7247465_7247547_7248062_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.43	chr19	+	10609	6	Antisense	novelGene_ENSMUSG00000024969.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	7252998	7265909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_7258623_7259165_7260191_7260398_7262356_7263098_7263333_7263932_7263991_7264198
ES.17318.5	chr19	+	2914	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-91	0	-91	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245552	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.6	chr19	+	2749	10	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	343.231052726229	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCTTCCATGTGTGC	NA	False	NA	20	True	AATAAA	-15	NA	7245573	7252588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248914_7251384_7251615_7251707
ES.17318.7	chr19	+	3000	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-67	0	intron_retention	FALSE	canonical	3	1016	junction_10	68.3195433240006	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245576	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.8	chr19	+	3506	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	-67	-616	-67	616	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAACTCAGGTGAGGGC	NA	False	NA	NA	False	NA	NA	NA	7245576	7253206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ES.17318.9	chr19	+	2836	13	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	312.162617877285	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245582	7252590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707_7251848_7251895
ES.17319.1	chr19	+	4126	1	Intergenic	novelGene_14397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACGTGCCAGGCATGG	8673	False	NA	NA	False	NA	NA	NA	7306401	7310527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7306400_7310500
ES.1732.1	chr1	+	235	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGTGTTCAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	161024168	161024403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161024200_161024400
ES.17320.1	chr19	-	4288	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-1	236	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTCTTTCTCCAAACT	3900	False	NA	NA	False	AATAAA	-22	NA	7319185	7252524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.10	chr19	-	6086	17	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_3	102.105261250339	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3847	False	NA	-1	True	AATAAA	-20	NA	7319238	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.100	chr19	-	3013	21	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.823726823539	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	3867	False	NA	NA	False	AAGAAA	-13	NA	7319218	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256475_7256644_7256924_7257048_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.101	chr19	-	2882	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	115.170793729986	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	3848	False	NA	NA	False	AAGAAA	-13	NA	7319237	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.102	chr19	-	3179	17	NNC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_3	112.882526742406	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	4069	False	NA	NA	False	AAGAAA	-13	NA	7319016	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7262125_7262233_7262354_7263096_7263334_7263928_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.103	chr19	-	3278	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	-618	0	2	0	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	3910	False	NA	NA	False	AAGAAA	-13	NA	7319175	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.105	chr19	-	3113	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	121.32795317742	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	3907	False	NA	NA	False	AAGAAA	-13	NA	7319178	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.106	chr19	-	2977	1	NIC	ENSMUSG00000024969.16	novel	4488	18	NA	NA	-1641	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	8815	False	NA	NA	False	AAGAAA	-13	NA	7257100	7254123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254100_7257100
ES.17320.108	chr19	-	3129	17	FSM	ENSMUSG00000024969.16	ENSMUST00000164205.8	3104	17	-52	27	9	-1	multi-exon	FALSE	canonical	3	127	junction_3	67.4368917952184	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAGAAAAAGAAAAAA	3869	False	NA	NA	False	AAGAAA	-12	NA	7319216	7254124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.109	chr19	-	4527	7	ISM	ENSMUSG00000024969.16	ENSMUST00000025921.15	3018	18	1418	8407	1418	-409	internal_fragment	FALSE	canonical	3	262	junction_1	34.6253760509062	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTGTTTCACACATAGG	4556	False	NA	NA	False	NA	NA	NA	7271394	7262530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967
ES.17320.12	chr19	-	4793	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	117.461104673467	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3899	False	NA	-1	True	AATAAA	-20	NA	7319186	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.13	chr19	-	4456	17	FSM	ENSMUSG00000024969.16	ENSMUST00000164205.8	3104	17	-15	-1337	-2	0	multi-exon	FALSE	canonical	3	127	junction_3	67.4368917952184	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3906	False	NA	-1	True	AATAAA	-20	NA	7319179	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.15	chr19	-	6935	17	NIC	ENSMUSG00000024969.16	novel	4488	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	85.2033413370626	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3901	False	NA	-1	True	AATAAA	-20	NA	7319184	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.17	chr19	-	4546	19	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	127.870365006571	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3140	False	NA	-2	True	AATAAA	-19	NA	7272810	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7272402
ES.17320.18	chr19	-	4131	19	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.944380114233	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3910	False	NA	-2	True	AATAAA	-19	NA	7319175	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7259696_7259814_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.2	chr19	-	4293	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	7	235	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTTCTTTCTCCAAAC	3867	False	NA	NA	False	AATAAA	-21	NA	7319218	7252525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.22	chr19	-	4699	20	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.023361738245	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3149	False	NA	-2	True	AATAAA	-19	NA	7272801	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7269318_7269481_7272402
ES.17320.23	chr19	-	3979	17	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	109.190129476066	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3900	False	NA	-2	True	AATAAA	-19	NA	7319185	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.24	chr19	-	4086	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.790811557365	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3869	False	NA	-2	True	AATAAA	-19	NA	7319216	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319100
ES.17320.26	chr19	-	4935	16	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_3	86.7782358787169	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3852	False	NA	-2	True	AATAAA	-19	NA	7319233	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263991_7264198_7264270_7264365_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.27	chr19	-	4180	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	106.764148164697	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	4099	False	NA	-2	True	AATAAA	-19	NA	7318986	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7318863
ES.17320.28	chr19	-	4191	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.790811557365	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3909	False	NA	-2	True	AATAAA	-19	NA	7319176	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318955
ES.17320.29	chr19	-	4067	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	120.705051023396	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3866	False	NA	-2	True	AATAAA	-19	NA	7319219	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255465_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263987_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.32	chr19	-	4664	19	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_4	126.195969981241	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3907	False	NA	-2	True	AATAAA	-19	NA	7319178	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260955_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.33	chr19	-	4113	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3838	False	NA	-2	True	AATAAA	-19	NA	7319247	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.35	chr19	-	3638	14	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	347	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.6176470296134	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3059	False	NA	-2	True	AATAAA	-19	NA	7264381	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258616_7259156_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365
ES.17320.37	chr19	-	4220	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.248111684521	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3880	False	NA	-2	True	AATAAA	-19	NA	7319205	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263987_7264198_7264270_7264365_7264612_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.38	chr19	-	3766	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	83.0892712064523	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3897	False	NA	-2	True	AATAAA	-19	NA	7319188	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258402_7259204_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.39	chr19	-	4378	21	NNC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.235199566292	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3845	False	NA	-2	True	AATAAA	-19	NA	7319240	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7269318_7269481_7272402_7272453_7318532_7318620_7319131
ES.17320.4	chr19	-	4677	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-440	-1363	-13	0	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3847	False	NA	-1	True	AATAAA	-20	NA	7319238	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.40	chr19	-	4912	21	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_6	131.68431949173	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3880	False	NA	-2	True	AATAAA	-19	NA	7319205	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256475_7256644_7256973_7257048_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.42	chr19	-	4060	18	NIC	ENSMUSG00000024969.16	novel	4488	18	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	105.193642498705	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCTACTGTTCCT	3870	False	NA	-2	True	AATAAA	-19	NA	7319215	7252761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.43	chr19	-	4273	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGCCTACTGTTCC	3845	False	NA	-3	True	AATAAA	-18	NA	7319240	7252762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.45	chr19	-	4078	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.10470117981	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGCCTACTGTTCC	3866	False	NA	-3	True	AATAAA	-18	NA	7319219	7252762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260955_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.47	chr19	-	4316	17	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_3	84.1802149780458	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGCCTACTGTTCC	3870	False	NA	-3	True	AATAAA	-18	NA	7319215	7252762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.48	chr19	-	4223	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	124.244687541446	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGCCTACTGTTCC	4082	False	NA	-3	True	AATAAA	-18	NA	7319003	7252762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7318863
ES.17320.5	chr19	-	4100	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3825	False	NA	-1	True	AATAAA	-20	NA	7319260	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.53	chr19	-	4267	20	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	127.229284595669	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3910	False	NA	-4	True	AATAAA	-17	NA	7319175	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
ES.17320.55	chr19	-	4501	19	NNC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.764148164697	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3897	False	NA	-4	True	AATAAA	-17	NA	7319188	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318707_7318829
ES.17320.56	chr19	-	4056	19	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	110.626498734355	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3894	False	NA	-4	True	AATAAA	-17	NA	7319191	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258616_7259156_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.57	chr19	-	3865	17	NIC	ENSMUSG00000024969.16	novel	3104	17	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	61.0913442620966	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3895	False	NA	-4	True	AATAAA	-17	NA	7319190	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.58	chr19	-	4571	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	131.235615225445	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3140	False	NA	-4	True	AATAAA	-17	NA	7272810	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7272402
ES.17320.59	chr19	-	4377	17	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_2	112.194568022476	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	4099	False	NA	-4	True	AATAAA	-17	NA	7318986	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.6	chr19	-	4850	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_5	122.221904361768	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3869	False	NA	-1	True	AATAAA	-20	NA	7319216	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.60	chr19	-	4172	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	123.628475684205	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3864	False	NA	-4	True	AATAAA	-17	NA	7319221	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
ES.17320.61	chr19	-	4809	20	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_2	127.511924378568	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3862	False	NA	-4	True	AATAAA	-17	NA	7319223	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256924_7257048_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.62	chr19	-	4221	18	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_3	108.666309323575	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3870	False	NA	-4	True	AATAAA	-17	NA	7319215	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
ES.17320.63	chr19	-	4791	19	NNC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_3	119.738604189849	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3892	False	NA	-4	True	AATAAA	-17	NA	7319193	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7269318_7269481_7318532
ES.17320.64	chr19	-	3504	17	NNC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_1	112.927244277012	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	4111	False	NA	-4	True	AATAAA	-17	NA	7318974	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254188_7258595_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.65	chr19	-	4116	19	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.952436287642	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3899	False	NA	-4	True	AATAAA	-17	NA	7319186	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264518_7264612_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.66	chr19	-	3955	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	131.719871574011	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	3898	False	NA	-4	True	AATAAA	-17	NA	7319187	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.67	chr19	-	5379	16	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_3	92.1230095518426	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGCCTACTGTTC	4120	False	NA	-4	True	AATAAA	-17	NA	7318965	7252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.68	chr19	-	4357	18	FSM	ENSMUSG00000024969.16	ENSMUST00000025921.15	3018	18	19	-1358	19	-5	multi-exon	FALSE	canonical	0	0	junction_3	103.565869249268	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGCCTACTGT	3157	False	NA	-6	True	AATAAA	-15	NA	7272793	7252765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7272402
ES.17320.7	chr19	-	5518	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	113.2809928158	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3908	False	NA	-1	True	AATAAA	-20	NA	7319177	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.72	chr19	-	3381	11	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.424453107393	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGAGCTGCTGCCTAC	3924	False	NA	-9	True	AATAAA	-12	NA	7319161	7252768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262331_7319006
ES.17320.73	chr19	-	2775	7	NNC	ENSMUSG00000024969.16	novel	910	8	NA	NA	266	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.971025366422	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGAGCTGCTGCCTAC	7291	False	NA	-9	True	AATAAA	-12	NA	7260149	7252768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256466_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090
ES.17320.74	chr19	-	4462	18	NNC	ENSMUSG00000024969.16	novel	4488	18	NA	NA	3	-8	intron_retention	FALSE	canonical	0	0	junction_10	118.744965291194	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGAGCTGCTGCCTAC	3924	False	NA	-9	True	AATAAA	-12	NA	7319161	7252768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263091_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.75	chr19	-	4137	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGAGCTGCTGCCTAC	3867	False	NA	-9	True	AATAAA	-12	NA	7319218	7252768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
ES.17320.78	chr19	-	2809	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3866	False	NA	NA	False	AAGAAA	-39	NA	7319219	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
ES.17320.79	chr19	-	4500	18	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_3	107.676241624514	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3879	False	NA	NA	False	AAGAAA	-39	NA	7319206	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.8	chr19	-	4878	17	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	88.4695392493936	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3909	False	NA	-1	True	AATAAA	-20	NA	7319176	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.80	chr19	-	2752	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3836	False	NA	NA	False	AAGAAA	-39	NA	7319249	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.81	chr19	-	3458	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_5	122.221904361768	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3924	False	NA	NA	False	AAGAAA	-39	NA	7319161	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.82	chr19	-	2742	18	NNC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.10470117981	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3867	False	NA	NA	False	AAGAAA	-39	NA	7319218	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260955_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.83	chr19	-	5600	17	NIC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	85.2033413370626	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3899	False	NA	NA	False	AAGAAA	-39	NA	7319186	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.85	chr19	-	2903	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3880	False	NA	NA	False	AAGAAA	-39	NA	7319205	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.86	chr19	-	3579	20	NNC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	66	0	intron_retention	FALSE	canonical	0	0	junction_3	129.386127861925	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3987	False	NA	NA	False	AAGAAA	-39	NA	7319098	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7273430_7273714_7274278_7274375_7318532
ES.17320.87	chr19	-	3013	18	FSM	ENSMUSG00000024969.16	ENSMUST00000025921.15	3018	18	31	-26	31	0	multi-exon	FALSE	canonical	0	0	junction_3	103.565869249268	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3169	False	NA	NA	False	AAGAAA	-39	NA	7272781	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7272402
ES.17320.88	chr19	-	2751	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3864	False	NA	NA	False	AAGAAA	-39	NA	7319221	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.9	chr19	-	4227	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	115.170793729986	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3866	False	NA	-1	True	AATAAA	-20	NA	7319219	7252760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.91	chr19	-	2948	20	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	131.986925399656	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3866	False	NA	NA	False	AAGAAA	-39	NA	7319219	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319100
ES.17320.92	chr19	-	3096	18	NNC	ENSMUSG00000024969.16	novel	2874	18	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_3	107.05465408817	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	4099	False	NA	NA	False	AAGAAA	-39	NA	7318986	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264190_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.93	chr19	-	3277	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	117.461104673467	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	4078	False	NA	NA	False	AAGAAA	-39	NA	7319007	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ES.17320.94	chr19	-	2884	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	104.790811557365	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3880	False	NA	NA	False	AAGAAA	-39	NA	7319205	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318955
ES.17320.96	chr19	-	2564	17	NIC	ENSMUSG00000024969.16	novel	3104	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	61.0913442620966	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3862	False	NA	NA	False	AAGAAA	-39	NA	7319223	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.97	chr19	-	3269	17	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	85.5975092730507	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3910	False	NA	NA	False	AAGAAA	-39	NA	7319175	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
ES.17320.98	chr19	-	2969	21	NNC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	138.678720429632	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCGGCCACCTTTCCT	3910	False	NA	NA	False	AAGAAA	-39	NA	7319175	7254097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7274278_7274375_7319131
ES.17321.1	chr19	+	157	1	Intergenic	novelGene_14398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7321243	7321400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7321200_7321400
ES.17322.1	chr19	-	252	1	Genic_Genomic	ENSMUSG00000024970.6	novel	NA	NA	NA	NA	20096	88	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGCATCAAGGACACAA	10003	False	NA	NA	False	TTTAAA	-27	NA	7331606	7331354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_7331400_7331600
ES.17323.1	chr19	-	181	1	Intergenic	novelGene_14399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGGTTTTGG	8829	False	NA	-5	True	NA	NA	NA	7333026	7332845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7332800_7333000
ES.17324.1	chr19	-	3232	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-79	-1	-79	1	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTCTAGGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	7360438	7333826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.12	chr19	-	2106	7	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	-62	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	148.268899863278	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360421	7335058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7348507_7348631_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.13	chr19	-	2180	7	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_2	157.787480139867	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360358	7335058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7348507_7348631_7349187_7349250_7351021_7351220_7351386_7351513_7351660_7352216_7360036
ES.17324.14	chr19	-	2022	7	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.686338722009	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360358	7335058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7348444_7348547_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.15	chr19	-	5779	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	3845	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	129.277066798408	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7356441	7335058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7354574_7354618
ES.17324.17	chr19	-	1964	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	129.277066798408	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAAGTTCTGTGTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	7360357	7335058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352261_7360036
ES.17324.18	chr19	-	7404	5	FSM	ENSMUSG00000024970.6	ENSMUST00000236817.2	1477	5	-118	-5809	-45	5809	multi-exon	FALSE	canonical	3	309	junction_1	7.5291101731878	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATGTGAACTATAGTG	NA	False	NA	NA	False	NA	NA	NA	7360404	7344789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.19	chr19	-	6382	5	FSM	ENSMUSG00000024970.6	ENSMUST00000236817.2	1477	5	-70	-4835	3	4835	multi-exon	FALSE	canonical	3	309	junction_1	7.5291101731878	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTAGGCTTTTGCCAG	NA	False	NA	NA	False	NA	NA	NA	7360356	7345763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.20	chr19	-	3983	6	NNC	ENSMUSG00000024970.6	novel	1477	5	NA	NA	2	4607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.077164240937	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAAAAGATGAT	NA	False	NA	NA	False	NA	NA	NA	7360357	7345991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7346092_7348263_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.21	chr19	-	1597	5	FSM	ENSMUSG00000024970.6	ENSMUST00000236817.2	1477	5	-118	-2	-45	2	multi-exon	FALSE	canonical	3	309	junction_1	7.5291101731878	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGCATAACGTGGTT	NA	False	NA	NA	False	ATTAAA	-9	NA	7360404	7350596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.3	chr19	-	2002	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	-77	1227	-77	-4	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7360436	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17324.4	chr19	-	2045	5	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	-45	-4	intron_retention	FALSE	canonical	3	309	junction_2	11.4345966260293	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7360404	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7352216_7360036
ES.17324.5	chr19	-	1748	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	128.080599623831	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7360365	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352033_7360036
ES.17324.6	chr19	-	2731	4	ISM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	7090	1227	-1087	-4	intron_retention	FALSE	canonical	3	309	junction_2	12.684198393627	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7353269	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660
ES.17324.7	chr19	-	2451	1	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	14197	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	4350	False	NA	NA	False	AATAAA	-17	NA	7337505	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7335100_7337500
ES.17324.8	chr19	-	1935	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	-48	-4	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	121.287097417656	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTGTGTGGGCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7360407	7335054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7335815_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ES.17325.1	chr19	+	3994	1	FSM	ENSMUSG00000099923.3	ENSMUST00000186160.3	1025	1	602	-3571	602	3571	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAACAGACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	7360503	7364497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7360500_7364500
ES.17326.1	chr19	-	1689	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	-53	-982	-53	982	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCCCACTCTGCTGCCT	6551	False	NA	NA	False	NA	NA	NA	7376495	7374806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7374800_7376500
ES.17327.1	chr19	+	5473	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-481	-3	-481	3	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTTTTTATTTATAA	NA	False	NA	NA	False	AATAAA	-23	NA	7394508	7403272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
ES.17327.10	chr19	+	4800	4	ISM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	1	368	1	-4	intron_retention	FALSE	canonical	3	16	junction_1	22.3059533657621	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGAGTCACAGCCAACT	NA	False	NA	NA	False	AATAAA	-14	NA	7394990	7402901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278
ES.17327.11	chr19	+	3803	3	NNC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	7394991	7403268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7395283_7397431_7397665_7399989
ES.17327.12	chr19	+	3783	3	NNC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCACTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	7394991	7403266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7395283_7397431_7397665_7400007
ES.17327.13	chr19	+	8010	2	ISM	ENSMUSG00000053080.11	ENSMUST00000160561.3	4064	3	-3401	-365	2	1	intron_retention	FALSE	canonical	3	69	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTTTTTTATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	7394991	7403270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7399010_7399278
ES.17327.14	chr19	+	3678	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	6.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATGAGTCACAGCCAA	NA	False	NA	NA	False	AATAAA	-12	NA	7394991	7402899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7395283_7397431_7397927_7400007
ES.17327.15	chr19	+	3253	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	2	1734	2	832	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGCAAATGTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7394991	7401535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
ES.17327.16	chr19	+	4513	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	2	474	2	-110	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAAACATTTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	7394991	7402795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
ES.17327.17	chr19	+	4536	1	FSM	ENSMUSG00000098293.3	ENSMUST00000183837.3	70	1	-1573	-2893	-1573	2893	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATGAGTCACAGCCAAC	NA	False	NA	NA	False	AATAAA	-13	NA	7398364	7402900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7398400_7402900
ES.17327.18	chr19	+	4605	1	FSM	ENSMUSG00000098293.3	ENSMUST00000183837.3	70	1	-1273	-3262	-1273	3262	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7398664	7403269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7398700_7403300
ES.17327.19	chr19	+	3284	3	NNC	ENSMUSG00000053080.11	novel	4064	3	NA	NA	1257	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	21	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	7399649	7403268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7399828_7400007_7401297_7401451
ES.17327.2	chr19	+	4927	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-306	368	-306	-4	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGAGTCACAGCCAACT	NA	False	NA	NA	False	AATAAA	-14	NA	7394683	7402901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
ES.17327.3	chr19	+	5201	4	ISM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-31	-1	-31	1	intron_retention	FALSE	canonical	3	16	junction_1	22.3059533657621	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTTTTTTATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	7394958	7403270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278
ES.17327.4	chr19	+	4074	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	6.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTTTTTTATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	7394966	7403270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7395283_7397431_7397927_7400007
ES.17327.5	chr19	+	4258	4	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.3076733143296	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACAGCCAACTTAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	7394968	7402907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7395283_7397431_7397927_7399278_7399828_7400007
ES.17327.6	chr19	+	4844	5	NNC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_1	24.7234706301522	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	7394976	7403268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7395283_7397588_7397927_7398619_7399010_7399278_7399828_7400007
ES.17327.7	chr19	+	3442	4	ISM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	-7	1734	-7	832	intron_retention	FALSE	canonical	3	16	junction_1	22.3059533657621	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGCAAATGTCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	7394982	7401535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278
ES.17327.8	chr19	+	5865	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	16	junction_1	26.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7394986	7403269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7395283_7397431_7399010_7399278
ES.17327.9	chr19	+	4600	4	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.3076733143296	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCACTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	7394986	7403267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7395283_7397431_7397927_7399278_7399828_7400007
ES.17328.1	chr19	+	2913	1	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGATATCTTATAGAAC	NA	False	NA	NA	False	NA	NA	NA	7403647	7406560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_7403600_7406600
ES.17329.1	chr19	+	147	1	Intergenic	novelGene_14401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	7431371	7431518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7431400_7431500
ES.1733.1	chr1	+	205	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACCAAGAAGTCTTGG	NA	False	NA	NA	False	NA	NA	NA	161070639	161070844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161070600_161070800
ES.17330.1	chr19	+	6830	2	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGACAGAGAGATACC	NA	False	NA	NA	False	NA	NA	NA	7439743	7447000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_7444155_7444581
ES.17330.2	chr19	+	4528	2	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGACAGAGAGATACC	NA	False	NA	NA	False	NA	NA	NA	7442042	7447000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_7444170_7444599
ES.17330.3	chr19	+	4958	1	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGACAGAGAGATACC	NA	False	NA	NA	False	NA	NA	NA	7442042	7447000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_7442000_7447000
ES.17331.1	chr19	+	177	1	Intergenic	novelGene_14403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTTG	NA	False	NA	NA	False	NA	NA	NA	7458363	7458540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_7458400_7458500
ES.17332.1	chr19	-	2858	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-78	-18	1	18	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGTACAGTTTGGGT	8961	False	NA	0	True	AATAAA	-35	NA	7460645	7403247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.10	chr19	-	1132	8	NNC	ENSMUSG00000024758.16	novel	2898	8	NA	NA	-1	541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.492331038004	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGCTATAAACTTGTTA	8968	False	NA	NA	False	AATAAA	-17	NA	7460638	7404366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7404450_7405049_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.14	chr19	-	1139	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-47	1670	18	-28	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGGGTGGAGCTTTA	8992	False	NA	-13	True	AATAAA	-32	NA	7460614	7404935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.15	chr19	-	941	6	ISM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-18	3714	-18	-2072	5prime_fragment	FALSE	canonical	3	670	junction_2	29.1958901217277	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCATCTTTGGGCTTT	9021	False	NA	NA	False	AATAAA	-21	NA	7460585	7406979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.16	chr19	-	170	1	Intergenic	novelGene_14400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATTAAACTTGA	5581	False	NA	NA	False	NA	NA	NA	7426922	7426752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7426800_7426900
ES.17332.17	chr19	-	4413	1	NIC	ENSMUSG00000024758.16	novel	4956	8	NA	NA	25130	-26117	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGACTAGAGAGATGG	6161	False	NA	NA	False	AATAAA	-8	NA	7435437	7431024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7431000_7435400
ES.17332.18	chr19	-	178	1	Intergenic	novelGene_14402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAAATTAAG	NA	False	NA	NA	False	NA	NA	NA	7454251	7454073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7454100_7454300
ES.17332.3	chr19	-	2602	8	NNC	ENSMUSG00000024758.16	novel	4956	8	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.492331038004	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTCTGCAACTTTAT	9147	False	NA	-18	True	AATAAA	-17	NA	7460459	7403265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7404948_7404999_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.6	chr19	-	3624	7	NNC	ENSMUSG00000024758.16	novel	4956	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.120289436795	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTCTGCAACTTTAT	8992	False	NA	-18	True	AATAAA	-17	NA	7460614	7403265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7406056_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.7	chr19	-	2246	8	NNC	ENSMUSG00000024758.16	novel	4956	8	NA	NA	117	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.492331038004	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCAGTCTGCAACTTT	9156	False	NA	-20	True	AATAAA	-15	NA	7460450	7403267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7404412_7404808_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17332.8	chr19	-	2723	7	NNC	ENSMUSG00000024758.16	novel	4956	8	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	253.838148345664	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATCAGTCTGCAACTTT	8992	False	NA	-20	True	AATAAA	-15	NA	7460614	7403267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412420_7460303
ES.17332.9	chr19	-	1780	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-71	1053	-1	589	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATTGAGTTATTGTAAT	8968	False	NA	NA	False	TATAAA	-36	NA	7460638	7404318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ES.17333.1	chr19	+	2066	13	FSM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	0	5474	0	0	multi-exon	TRUE	canonical	2	6	junction_1	12.0355376559033	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471404	7511565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7471727_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.10	chr19	+	2004	13	NNC	ENSMUSG00000024759.15	novel	4368	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.2685928249968	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471767	7511565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7472027_7486712_7486928_7487347_7487492_7494241_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.11	chr19	+	2738	1	NIC	ENSMUSG00000024759.15	novel	437	3	NA	NA	-2	-12269	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAATCCAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	7471800	7474538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7471800_7474500
ES.17333.13	chr19	+	1792	1	NIC	ENSMUSG00000024759.15	novel	437	3	NA	NA	7	-13206	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGTTCTCACAGTGAG	NA	False	NA	NA	False	NA	NA	NA	7471809	7473601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7471800_7473600
ES.17333.14	chr19	+	1077	6	NIC	ENSMUSG00000024759.15	novel	4368	13	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	19.5918350340135	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTTTAAGATTTAT	NA	False	NA	NA	False	AATAAA	-6	NA	7471814	7497312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7496962
ES.17333.15	chr19	+	2710	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	19	1639	19	761	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAATTGTAGTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	7471821	7512326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.16	chr19	+	6357	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	19	-2008	19	-1066	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTGTGTTGTTACTG	NA	False	NA	6	True	ATTAAA	-18	NA	7471821	7515973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.17	chr19	+	179	1	ISM	ENSMUSG00000024759.15	ENSMUST00000235260.2	1091	2	15260	338	15123	327	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAATAAGATTTGGT	NA	False	NA	NA	False	NA	NA	NA	7487022	7487201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7487000_7487200
ES.17333.18	chr19	+	6229	3	ISM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	36478	2	35983	-2	3prime_fragment	FALSE	canonical	3	40	junction_2	1.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGTCCTCATTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	7507882	7517037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7507957_7509380_7509813_7511314
ES.17333.2	chr19	+	2667	13	FSM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	164	4709	9	765	multi-exon	FALSE	canonical	2	6	junction_1	12.0355376559033	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTAGTTTGAATGAAC	NA	False	NA	NA	False	AATAAA	-21	NA	7471568	7512330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7471727_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.3	chr19	+	2998	12	NIC	ENSMUSG00000024759.15	novel	4368	13	NA	NA	79	0	intron_retention	FALSE	canonical	3	31	junction_6	6.29574170661119	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471638	7511565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.4	chr19	+	3681	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-163	850	80	-850	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAGTAGTGAATTATTG	NA	False	NA	NA	False	GATAAA	-28	NA	7471639	7513115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.5	chr19	+	1825	13	NNC	ENSMUSG00000024759.15	novel	7540	13	NA	NA	90	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.4853315371431	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGGCTTGGAAGCAGT	NA	False	NA	NA	False	AATAAA	-30	NA	7471649	7511563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_7471727_7486706_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.6	chr19	+	1216	1	NIC	ENSMUSG00000024759.15	novel	7540	13	NA	NA	-93	-13922	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTAGCAGTCTAAAACGT	NA	False	NA	NA	False	NA	NA	NA	7471669	7472885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_7471700_7472900
ES.17333.7	chr19	+	7514	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-73	-3073	-33	-1	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTCCTCATTCTTTA	NA	False	NA	NA	False	AGTAAA	-18	NA	7471729	7517038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.8	chr19	+	2336	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-50	2082	-10	318	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGATGCTTTATTATC	NA	False	NA	NA	False	AAAAAG	-21	NA	7471752	7511883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17333.9	chr19	+	4611	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	-41	-202	-1	202	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGTTGCCAAGATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	7471761	7514167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ES.17334.1	chr19	-	246	1	Intergenic	novelGene_14404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTAGTTTTTTTTT	9391	False	NA	NA	False	NA	NA	NA	7473898	7473652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7473700_7473900
ES.17335.1	chr19	+	816	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	-29	2736	-29	-902	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTACCTGGTGTGAAGTC	NA	False	NA	33	True	AATAAA	-35	NA	7534794	7563174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ES.17335.2	chr19	+	3523	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	31.8825971338597	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCTGTAGTCATGG	NA	False	NA	NA	False	NA	NA	NA	7534823	7565910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ES.17335.3	chr19	+	1001	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	-24	924	2	-924	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGAGGATACTGC	NA	False	NA	11	True	AATAAA	-13	NA	7534825	7563152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ES.17335.4	chr19	+	3734	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	3	-1836	3	2	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTAGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	7534852	7565912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ES.17335.5	chr19	+	2149	4	ISM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	308	1433	282	401	3prime_fragment	FALSE	canonical	3	191	junction_2	16.9771087709958	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATATACTAATTCTAA	NA	False	NA	NA	False	AATAAA	-30	NA	7535131	7564477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
ES.17335.6	chr19	+	800	4	ISM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	326	904	326	-904	3prime_fragment	FALSE	canonical	3	191	junction_2	16.9771087709958	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCTACCTGGTGTGAAG	NA	False	NA	31	True	AATAAA	-33	NA	7535175	7563172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
ES.17336.1	chr19	-	175	1	Intergenic	novelGene_14405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	7570034	7569859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_7569900_7570000
ES.17337.1	chr19	-	2651	9	FSM	ENSMUSG00000024972.17	ENSMUST00000099729.10	2757	9	110	-4	35	3	multi-exon	FALSE	canonical	2	3	junction_8	5.3253521010352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATATGTTAGTGGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	7584433	7574021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026
ES.17337.2	chr19	-	2356	9	NIC	ENSMUSG00000024972.17	novel	2470	10	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	5.1234753829798	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTCATATGTTAGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	7584566	7574026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7581333_7581548_7581668_7581758_7584026_7584189_7584491
ES.17338.1	chr19	-	173	1	Intergenic	novelGene_14406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAGGAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	8627653	8627480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8627500_8627700
ES.17339.1	chr19	+	158	1	Intergenic	novelGene_14407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAAATCTTTA	7038	False	NA	NA	False	NA	NA	NA	8674798	8674956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_8674800_8675000
ES.1734.1	chr1	-	5471	1	Genic_Genomic	ENSMUSG00000026701.16	novel	NA	NA	NA	NA	8907	3935	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGTCTTTATCTTTAAAAA	2194	False	NA	NA	False	TTTAAA	-4	NA	161069217	161063746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_161063700_161069200
ES.1734.10	chr1	-	1545	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	-3	-583	0	0	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078739	161068584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
ES.1734.11	chr1	-	1406	5	NNC	ENSMUSG00000026701.16	novel	2387	5	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	766.832119828062	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078717	161068584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078597
ES.1734.12	chr1	-	3093	5	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	1	-583	1	0	intron_retention	FALSE	canonical	3	63	junction_4	739.620299545652	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078735	161068584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928
ES.1734.15	chr1	-	1509	4	FSM	ENSMUSG00000026701.16	ENSMUST00000156318.8	874	4	-18	-617	-18	-3	multi-exon	FALSE	canonical	0	0	junction_3	851.560267326329	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAAAACCGTTGTCATG	NA	False	NA	-14	True	AATAAA	-7	NA	161078709	161068587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078326
ES.1734.16	chr1	-	3783	3	ISM	ENSMUSG00000026701.16	ENSMUST00000155135.2	825	4	2448	-2063	1836	16	3prime_fragment	FALSE	canonical	3	1689	junction_2	75	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCGGGATTCTTTACT	NA	False	NA	-4	True	ATTAAA	-18	NA	161076288	161069117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_161071292_161071765_161071913_161074826
ES.1734.17	chr1	-	4506	4	ISM	ENSMUSG00000026701.16	ENSMUST00000156678.8	913	5	3	-16	0	16	intron_retention	FALSE	canonical	3	1689	junction_3	61.3532576333337	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCGGGATTCTTTACT	NA	False	NA	-4	True	ATTAAA	-18	NA	161078736	161069117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826
ES.1734.18	chr1	-	7366	3	ISM	ENSMUSG00000026701.16	ENSMUST00000156678.8	913	5	57	-16	9	16	intron_retention	FALSE	canonical	3	1772	junction_1	33.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCGGGATTCTTTACT	NA	False	NA	-4	True	ATTAAA	-18	NA	161078682	161069117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_161069420_161071144_161071292_161071765
ES.1734.19	chr1	-	1252	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	-304	1439	-304	13	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTCTCGGGATTCTTT	NA	False	NA	-7	True	ATTAAA	-15	NA	161079093	161069120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ES.1734.2	chr1	-	2341	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	53	-7	0	7	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTGTGTTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	161078736	161067674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ES.1734.20	chr1	-	1004	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	1	-46	1	12	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTCTCGGGATTCTT	NA	False	NA	-8	True	ATTAAA	-14	NA	161078735	161069121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
ES.1734.24	chr1	-	733	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	24	537	0	12	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTCTCGGGATTCTT	NA	False	NA	-8	True	ATTAAA	-14	NA	161078732	161069121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
ES.1734.3	chr1	-	2150	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	47	-903	-18	0	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTGAGTCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	161078709	161067681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
ES.1734.4	chr1	-	1489	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	6	892	6	11	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTTTTAAAGTACTAC	NA	False	NA	0	True	AATAAA	-21	NA	161078783	161068573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ES.1734.5	chr1	-	3492	5	NIC	ENSMUSG00000026701.16	novel	959	6	NA	NA	1	6	intron_retention	FALSE	canonical	3	50	junction_4	745.235030040859	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078735	161068578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161077040_161078591
ES.1734.6	chr1	-	5044	4	ISM	ENSMUSG00000026701.16	ENSMUST00000156678.8	913	5	4	-555	1	6	intron_retention	FALSE	canonical	3	1689	junction_3	61.3532576333337	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078735	161068578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826
ES.1734.7	chr1	-	4353	4	NIC	ENSMUSG00000026701.16	novel	2387	5	NA	NA	1	6	intron_retention	FALSE	canonical	3	1689	junction_3	61.3532576333337	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGTCATGTTTTAAAGT	NA	False	NA	-5	True	AATAAA	-16	NA	161078738	161068578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161069420_161071144_161071292_161071765_161074984_161078591
ES.1734.9	chr1	-	1530	6	NIC	ENSMUSG00000026701.16	novel	959	6	NA	NA	234	2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	850.357007379842	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTTGTCATGTTTTA	NA	False	NA	-9	True	AATAAA	-12	NA	161078457	161068582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078326
ES.17340.1	chr19	+	2461	1	Antisense	novelGene_ENSMUSG00000010095.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	8690813	8693274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_8690800_8693300
ES.17341.1	chr19	+	197	1	Intergenic	novelGene_14409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTTGAGACAGGGT	NA	False	NA	39	True	NA	NA	NA	8696533	8696730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_8696500_8696700
ES.17342.1	chr19	-	4061	10	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	4	23319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1305.38018680336	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATAGCTCATTTGTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	8690345	8660926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8663962_8669371_8669456_8685397_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
ES.17342.10	chr19	-	2663	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	6	19	intron_retention	FALSE	canonical	3	2610	junction_7	205.571676759505	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691237	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8690268_8690705
ES.17342.11	chr19	-	4931	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	-3519	-19	-2071	19	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8693868	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
ES.17342.12	chr19	-	1855	10	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	22	19	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	969.740642429844	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691438	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8691324
ES.17342.13	chr19	-	2586	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	9	19	intron_retention	FALSE	canonical	3	2610	junction_7	209.056871473301	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691234	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ES.17342.14	chr19	-	3024	7	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	9	19	intron_retention	FALSE	canonical	3	2940	junction_6	111.952991126732	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691234	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
ES.17342.16	chr19	-	3102	7	ISM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	5	-49	5	19	intron_retention	FALSE	canonical	3	3081	junction_6	73.6985225240114	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691238	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197
ES.17342.17	chr19	-	1954	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	-2	19	intron_retention	FALSE	canonical	3	2610	junction_7	211.517548844978	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691245	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ES.17342.19	chr19	-	3443	10	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-1586	19	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	975.292105657595	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8693383	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8691681
ES.17342.2	chr19	-	177	1	Intergenic	novelGene_14408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	8678607	8678430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8678400_8678600
ES.17342.20	chr19	-	3909	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	9	19	intron_retention	FALSE	canonical	3	2610	junction_7	211.790616662123	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8691234	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8689293_8690093_8690268_8690705
ES.17342.24	chr19	-	1853	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	7	17	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_1	999.720929809915	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	NA	False	NA	-4	True	AATAAA	-19	NA	8691236	8684933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685453_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ES.17342.25	chr19	-	1904	11	NNC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-1612	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	1238.10555285081	1190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTGACTTTCATCC	NA	False	NA	-4	True	AATAAA	-19	NA	8693409	8684933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8692773_8692868_8693338
ES.17342.26	chr19	-	2900	10	NNC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-1614	16	intron_retention	FALSE	canonical	0	0	junction_9	1302.48139248811	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATTGTGACTTTCATC	NA	False	NA	-5	True	AATAAA	-18	NA	8693411	8684934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8691117_8691478_8692039_8693247
ES.17342.28	chr19	-	2932	8	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-79	16	intron_retention	FALSE	canonical	3	190	junction_7	1017.34412133972	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATTGTGACTTTCATC	9121	False	NA	-5	True	AATAAA	-18	NA	8700641	8684934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8690268_8690705_8691117_8700347
ES.17342.29	chr19	-	1550	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	3	16	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	1346.95684786113	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATTGTGACTTTCATC	NA	False	NA	-5	True	AATAAA	-18	NA	8690346	8684934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8687338_8687483_8689197_8689293_8690093
ES.17342.3	chr19	-	2574	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	-25	-730	-25	-5	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGATATGGATGAGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	8691268	8684250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ES.17342.30	chr19	-	3473	2	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	1843	-16	1843	16	intron_retention	FALSE	canonical	3	3303	junction_1	0	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATTGTGACTTTCATC	NA	False	NA	-5	True	AATAAA	-18	NA	8688506	8684934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8685459_8685557
ES.17342.31	chr19	-	2763	7	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	9	16	intron_retention	FALSE	canonical	3	2610	junction_6	220.242038574736	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATTGTGACTTTCATC	NA	False	NA	-5	True	AATAAA	-18	NA	8691234	8684934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8687148_8689197_8690268_8690705
ES.17342.35	chr19	-	1908	9	NNC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	9	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1038.23106020529	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGAGATTGTGACTTTC	NA	False	NA	-8	True	AATAAA	-15	NA	8691234	8684937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689348_8690093_8690268_8690705
ES.17342.36	chr19	-	2407	9	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-20	12	intron_retention	FALSE	canonical	3	190	junction_8	977.870126537773	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGATTGTGACTTT	9180	False	NA	-9	True	AATAAA	-14	NA	8700582	8684938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8691117_8700347
ES.17342.37	chr19	-	3515	2	NNC	ENSMUSG00000010095.14	novel	239	3	NA	NA	1179	12	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGATTGTGACTTT	NA	False	NA	-9	True	AATAAA	-14	NA	8689170	8684938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8687979_8688695
ES.17342.4	chr19	-	2135	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	-6	684	-6	21	multi-exon	FALSE	canonical	3	190	junction_9	923.220423635268	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGACTTTCATCCTTCC	9023	False	NA	0	True	AATAAA	-23	NA	8700739	8684929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
ES.17342.5	chr19	-	2941	6	NIC	ENSMUSG00000010095.14	novel	1393	8	NA	NA	0	20	intron_retention	FALSE	canonical	3	3081	junction_5	80.5123592996752	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8690349	8684930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8685459_8685557_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197
ES.17342.6	chr19	-	2025	10	NNC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	-75	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	981.770333456008	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	9125	False	NA	-1	True	AATAAA	-22	NA	8700637	8684930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700354
ES.17342.7	chr19	-	1390	8	NNC	ENSMUSG00000010095.14	novel	1393	8	NA	NA	16	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1099.94126002719	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8690333	8684930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687085_8687148_8689197_8689293_8690093
ES.17342.8	chr19	-	3681	4	NIC	ENSMUSG00000010095.14	novel	378	6	NA	NA	5	20	intron_retention	FALSE	canonical	3	2610	junction_3	255.685136229873	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGACTTTCATCCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	8691238	8684930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8686775_8686913_8687148_8689197_8690268_8690705
ES.17342.9	chr19	-	3637	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	-1769	-49	-1215	19	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTGACTTTCATCCTT	NA	False	NA	-2	True	AATAAA	-21	NA	8693012	8684931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ES.17343.1	chr19	+	641	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	-37	1	-37	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700801	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.10	chr19	+	1491	6	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	444	junction_1	205.113237017995	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTGTGATGGCTTA	NA	False	NA	23	True	AATAAA	-12	NA	8700850	8703804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8703467_8703602
ES.17343.11	chr19	+	2514	3	NIC	ENSMUSG00000108414.2	novel	2348	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	781	junction_1	111	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGATGGCTTAT	NA	False	NA	24	True	AATAAA	-13	NA	8700850	8703805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8701554_8701766_8702621_8702848
ES.17343.12	chr19	+	1782	5	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	444	junction_1	245.22374986938	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGATGGCTTAT	NA	False	NA	24	True	AATAAA	-13	NA	8700850	8703805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8700871_8701504_8702411_8702585_8702621_8702848_8703467_8703602
ES.17343.13	chr19	+	476	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	12	117	0	-19	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAAATTTACCTTCCT	NA	False	NA	12	True	AATAAA	-20	NA	8700850	8703690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.14	chr19	+	2333	4	Fusion	ENSMUSG00000065280.3_ENSMUSG00000065392.3_ENSMUSG00000108414.2_ENSMUSG00000064721.6	novel	478	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	1003	junction_1	34.3931517731203	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700851	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8702621_8702848_8702888_8703145_8703467_8703602
ES.17343.15	chr19	+	2779	2	ISM	ENSMUSG00000065392.3_ENSMUSG00000108414.2_ENSMUSG00000064721.6	ENSMUST00000205852.2	510	6	-1408	1	2	0	intron_retention	FALSE	canonical	3	951	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700852	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8702411_8702585
ES.17343.16	chr19	+	1210	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	-501	0	17	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700867	8703807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.17	chr19	+	2207	2	FSM	ENSMUSG00000108414.2	ENSMUST00000206519.2	2728	2	521	0	3	0	multi-exon	FALSE	canonical	3	1003	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8701371	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8702621_8702848
ES.17343.18	chr19	+	734	8	ISM	ENSMUSG00000108414.2	ENSMUST00000205825.2	495	9	44	-96	29	0	3prime_fragment	FALSE	canonical	3	814	junction_1	107.541164401434	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGATGGCTTAT	NA	False	NA	24	True	AATAAA	-13	NA	8701554	8703805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.19	chr19	+	443	6	NNC	ENSMUSG00000108414.2	novel	744	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	431.128101612502	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8702036	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8702086_8702377_8702411_8702811_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.2	chr19	+	783	9	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	444	junction_1	212.636279830136	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700847	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8700871_8701504_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.20	chr19	+	736	4	ISM	ENSMUSG00000108414.2	ENSMUST00000206462.2	855	5	409	2	-32	0	3prime_fragment	FALSE	canonical	3	1057	junction_3	47.4622657135821	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGATGGCTTAT	NA	False	NA	24	True	AATAAA	-13	NA	8702435	8703805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.3	chr19	+	2325	2	ISM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	9	1	-3	0	intron_retention	FALSE	canonical	3	444	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700847	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8700871_8701504
ES.17343.4	chr19	+	633	10	NNC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	353.535162481911	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTGATGGCTTAT	NA	False	NA	24	True	AATAAA	-13	NA	8700847	8703805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8700871_8701504_8701554_8701727_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ES.17343.5	chr19	+	1603	7	ISM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	-521	3	-3	-1	intron_retention	FALSE	canonical	3	781	junction_1	104.667197450883	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTGTGATGGCTTA	NA	False	NA	23	True	AATAAA	-12	NA	8700847	8703804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145
ES.17343.6	chr19	+	2206	5	Fusion	ENSMUSG00000108414.2_ENSMUSG00000064721.6	novel	744	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	781	junction_1	103.4456378974	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700848	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8701554_8701766_8702411_8702585_8702621_8702848_8703467_8703602
ES.17343.7	chr19	+	2745	2	ISM	ENSMUSG00000108414.2	ENSMUST00000205539.2	2348	4	-2	-1	-2	0	intron_retention	FALSE	canonical	3	781	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700848	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8701554_8701766
ES.17343.8	chr19	+	1008	8	NIC	ENSMUSG00000108414.2	novel	605	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	444	junction_1	205.451220686645	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700849	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702621_8702848_8702888_8703145_8703467_8703602
ES.17343.9	chr19	+	2957	1	FSM	ENSMUSG00000065087.3	ENSMUST00000083153.3	126	1	-2380	-451	-2380	451	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700849	8703806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8700800_8703800
ES.17344.1	chr19	-	2856	1	Antisense	novelGene_ENSMUSG00000065378.3_AS_novelGene_ENSMUSG00000065281.4_AS_novelGene_ENSMUSG00000108414.2_AS_novelGene_ENSMUSG00000065392.3_AS_novelGene_ENSMUSG00000065280.3_AS_novelGene_ENSMUSG00000064721.6_AS_novelGene_ENSMUSG00000065087.3_AS_novelGene_ENSMUSG00000065305.3_AS_novelGene_ENSMUSG00000065782.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAACTACAGCACATAA	9620	False	NA	NA	False	NA	NA	NA	8703763	8700907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8700900_8703800
ES.17345.1	chr19	-	175	1	Intergenic	novelGene_14410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTAAAAACCCAGTC	3587	False	NA	NA	False	NA	NA	NA	8712426	8712251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8712300_8712400
ES.17346.1	chr19	+	1246	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	-43	1	-31	-1	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	932	False	NA	27	True	AATAAA	-20	NA	8713159	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.10	chr19	+	4421	4	NNC	ENSMUSG00000042729.12	novel	855	4	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	527.990530218109	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGACCTTTTGTGAT	966	False	NA	26	True	AATAAA	-19	NA	8713193	8717986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713902_8714110
ES.17346.11	chr19	+	2336	11	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	456.489693202377	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	966	False	NA	27	True	AATAAA	-20	NA	8713193	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713902_8714110_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717205_8717329_8717459_8717517_8717765
ES.17346.12	chr19	+	4039	6	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	475.858550411779	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGGACCTTTTGTGA	967	False	NA	25	True	AATAAA	-18	NA	8713194	8717985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713902_8714110_8717329_8717459_8717517_8717765
ES.17346.13	chr19	+	1412	9	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	5	3	intron_retention	FALSE	canonical	3	1012	junction_6	86.7319866024064	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTTTTGTGATGGGAG	968	False	NA	31	True	AATAAA	-24	NA	8713195	8717991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715359_8715516_8715619_8716629_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.14	chr19	+	1202	11	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	338.741509118679	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	968	False	NA	27	True	AATAAA	-20	NA	8713195	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717509_8717765
ES.17346.15	chr19	+	4181	21	Fusion	ENSMUSG00000042729.12_ENSMUSG00000010110.18	novel	1204	11	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_11	469.938070388003	415	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	970	False	NA	12	True	NA	NA	NA	8713197	8733006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765_8718021_8718338_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.16	chr19	+	1093	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	354.542515168108	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTGATCCTGGACCTTT	971	False	NA	20	True	AATAAA	-13	NA	8713198	8717980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8713270_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.17	chr19	+	2712	8	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	407.913456207444	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	971	False	NA	27	True	AATAAA	-20	NA	8713198	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713902_8714110_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.19	chr19	+	1363	9	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1012	junction_6	86.8533246341209	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	971	False	NA	21	True	AATAAA	-14	NA	8713198	8717981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.2	chr19	+	3241	22	Fusion	ENSMUSG00000042729.12_ENSMUSG00000010110.18	novel	1204	11	NA	NA	-29	-1	multi-exon	FALSE	canonical	0	0	junction_11	478.808077002858	415	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	934	False	NA	11	True	NA	NA	NA	8713161	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765_8718211_8718338_8718453_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.20	chr19	+	1189	11	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	342.001242687801	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	976	False	NA	21	True	AATAAA	-14	NA	8713203	8717981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715612_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.21	chr19	+	1857	6	NIC	ENSMUSG00000042729.12	novel	1078	11	NA	NA	-644	0	intron_retention	FALSE	canonical	0	0	junction_1	473.758335019026	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATCCTGGACCTTTTG	2004	False	NA	22	True	AATAAA	-15	NA	8714231	8717982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8715094_8715516_8715619_8716629_8716731_8716810_8717329_8717459_8717517_8717765
ES.17346.22	chr19	+	1831	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	-8	428	-8	-1	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6541	False	NA	11	True	NA	NA	NA	8718768	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.24	chr19	+	1580	10	NNC	ENSMUSG00000010110.18	novel	995	10	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.731050924307	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6562	False	NA	11	True	NA	NA	NA	8718789	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8718940_8720217_8720289_8720429_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.25	chr19	+	2426	8	NIC	ENSMUSG00000010110.18	novel	1720	11	NA	NA	25	-1	intron_retention	FALSE	canonical	0	0	junction_1	69.7274577720064	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6574	False	NA	11	True	NA	NA	NA	8718801	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8718940_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8727137_8727269_8727392_8732272
ES.17346.26	chr19	+	2670	9	NIC	ENSMUSG00000010110.18	novel	2251	11	NA	NA	25	-1	intron_retention	FALSE	canonical	3	140	junction_1	20.1121853611188	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6574	False	NA	11	True	NA	NA	NA	8718801	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8727137_8727269_8727392_8732272
ES.17346.27	chr19	+	6975	7	NNC	ENSMUSG00000010110.18	novel	2251	11	NA	NA	-27	1	intron_retention	FALSE	non_canonical	0	0	junction_4	72.9986681765877	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTGATGTCATTTCTG	6579	False	NA	13	True	NA	NA	NA	8718806	8733007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8721220_8722242_8727137_8727269_8727392_8732272
ES.17346.28	chr19	+	1549	10	FSM	ENSMUSG00000010110.18	ENSMUST00000177373.8	995	10	-36	-518	-27	-1	multi-exon	FALSE	canonical	0	0	junction_1	63.2129460095784	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6579	False	NA	11	True	NA	NA	NA	8718806	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8718940_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.29	chr19	+	1627	10	NIC	ENSMUSG00000010110.18	novel	995	10	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	80.6888552281211	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6580	False	NA	11	True	NA	NA	NA	8718807	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8718940_8720217_8720289_8720443_8720500_8720716_8720867_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.3	chr19	+	1083	10	NNC	ENSMUSG00000042729.12	novel	1078	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	361.550911668599	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	955	False	NA	21	True	AATAAA	-14	NA	8713182	8717981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715503_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.30	chr19	+	4068	5	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	190	junction_2	6.90561365846657	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6582	False	NA	11	True	NA	NA	NA	8718809	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8720788_8725824_8725942_8726018_8727137_8727269_8727392_8732272
ES.17346.31	chr19	+	2495	7	NIC	ENSMUSG00000010110.18	novel	1720	11	NA	NA	-24	-1	intron_retention	FALSE	canonical	0	0	junction_1	74.8108726500812	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6582	False	NA	11	True	NA	NA	NA	8718809	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8718940_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8727137_8727269_8727392_8732272
ES.17346.32	chr19	+	1748	11	NNC	ENSMUSG00000010110.18	novel	2251	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.327522740454	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTTGATGTCATT	6606	False	NA	9	True	NA	NA	NA	8718833	8733003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8718924_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.33	chr19	+	8363	4	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	194	junction_2	4.78423336480244	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTTTGTGGTCTTCCTT	6647	False	NA	NA	False	NA	NA	NA	8718874	8732406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8720289_8720443_8727137_8727269_8727392_8732272
ES.17346.34	chr19	+	1982	11	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	54.6512579910106	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6936	False	NA	11	True	NA	NA	NA	8719163	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8719486_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.35	chr19	+	2192	10	FSM	ENSMUSG00000010110.18	ENSMUST00000176013.8	2106	10	-87	1	-2	-1	multi-exon	FALSE	canonical	2	12	junction_4	59.188545772111	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6937	False	NA	11	True	NA	NA	NA	8719164	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720867_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.36	chr19	+	1722	11	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.327522740454	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTTGATGTCATT	6937	False	NA	9	True	NA	NA	NA	8719164	8733003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8719229_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.37	chr19	+	2009	11	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.2485293921929	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6942	False	NA	11	True	NA	NA	NA	8719169	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.38	chr19	+	4639	4	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	14	1752	intron_retention	FALSE	canonical	3	194	junction_3	4.92160768674447	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATATAAAAGAAAA	6957	False	NA	NA	False	NA	NA	NA	8719184	8729210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8720500_8720716_8720788_8725824_8727137_8727269
ES.17346.39	chr19	+	1898	12	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.2457389488859	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6966	False	NA	11	True	NA	NA	NA	8719193	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8719295_8719381_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.4	chr19	+	4423	3	FSM	ENSMUSG00000042729.12	ENSMUST00000238116.2	577	3	-3847	1	-6	-1	multi-exon	FALSE	canonical	3	1185	junction_2	52	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	957	False	NA	27	True	AATAAA	-20	NA	8713184	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8717329_8717459_8717517_8717765
ES.17346.40	chr19	+	2071	10	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-39	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	62.9463812588162	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTTGATGTCATTTC	6985	False	NA	11	True	NA	NA	NA	8719212	8733005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8719293_8719381_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.41	chr19	+	2673	1	FSM	ENSMUSG00000010110.18	ENSMUST00000176093.2	3015	1	342	0	-34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAAAGA	6990	False	NA	NA	False	NA	NA	NA	8719217	8721890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8719200_8721900
ES.17346.42	chr19	+	1765	11	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.327522740454	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTTGATGTCATT	6990	False	NA	9	True	NA	NA	NA	8719217	8733003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8719325_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.5	chr19	+	1212	10	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	17	junction_2	355.842176141316	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	958	False	NA	27	True	AATAAA	-20	NA	8713185	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713572_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17346.6	chr19	+	1994	7	FSM	ENSMUSG00000042729.12	ENSMUST00000210592.3	846	7	-23	-1125	-5	1	multi-exon	FALSE	canonical	3	1028	junction_4	42.4918292799399	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTGGACCTTTTGT	958	False	NA	23	True	AATAAA	-16	NA	8713185	8717983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810
ES.17346.7	chr19	+	1687	8	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	2	1	intron_retention	FALSE	canonical	3	1028	junction_4	83.0003688214082	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTGGACCTTTTGT	965	False	NA	23	True	AATAAA	-16	NA	8713192	8717983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8717329_8717459_8717517_8717765
ES.17346.8	chr19	+	4055	21	Fusion	ENSMUSG00000042729.12_ENSMUSG00000010110.18	novel	1204	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	65	junction_11	465.74038905811	415	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	965	False	NA	12	True	NA	NA	NA	8713192	8733006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765_8717890_8718338_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ES.17346.9	chr19	+	1206	11	NNC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	342.001242687801	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGACCTTTTGTGATG	966	False	NA	27	True	AATAAA	-20	NA	8713193	8717987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716635_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ES.17347.1	chr19	-	4837	2	Antisense	novelGene_ENSMUSG00000010110.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTCTTTTATATTTA	6308	False	NA	NA	False	NA	NA	NA	8734267	8729234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8729750_8729945
ES.17347.2	chr19	-	4311	1	Antisense	novelGene_ENSMUSG00000010110.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	6219	False	NA	NA	False	NA	NA	NA	8734356	8730045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8730000_8734400
ES.17348.1	chr19	+	3341	1	Genic_Genomic	ENSMUSG00000010097.16	novel	NA	NA	NA	NA	-5	-3331	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGGACTAAGACAAGACC	8564	False	NA	NA	False	NA	NA	NA	8734431	8737772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8734400_8737800
ES.17348.10	chr19	+	4205	18	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	621	junction_4	66.7119511711788	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8604	False	NA	34	True	GATAAA	-13	NA	8734471	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.11	chr19	+	4399	17	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	621	junction_4	67.631093764259	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8604	False	NA	34	True	GATAAA	-13	NA	8734471	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.12	chr19	+	2256	1	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	1	-4376	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTAGCTCTGGC	8604	False	NA	NA	False	NA	NA	NA	8734471	8736727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734500_8736700
ES.17348.14	chr19	+	4203	18	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	1	3	intron_retention	FALSE	canonical	3	680	junction_8	53.6547337131309	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8604	False	NA	35	True	GATAAA	-14	NA	8734471	8748274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.15	chr19	+	3283	21	FSM	ENSMUSG00000010097.16_ENSMUSG00000117924.2	ENSMUST00000010241.14	2326	21	37	-994	3	-559	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGGAACCTTTTAGA	8606	False	NA	NA	False	NA	NA	NA	8734473	8749280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.16	chr19	+	4070	19	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-2	1	intron_retention	FALSE	canonical	1	18	junction_16	186.591353854709	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCCCATTACTG	8613	False	NA	33	True	GATAAA	-12	NA	8734480	8748272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746406_8746548_8747623_8747685_8747937
ES.17348.17	chr19	+	4114	19	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-2	2	intron_retention	FALSE	canonical	3	680	junction_8	54.7998884832604	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8613	False	NA	34	True	GATAAA	-13	NA	8734480	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.18	chr19	+	4198	18	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-2	3	intron_retention	FALSE	canonical	3	680	junction_8	56.132751697639	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCCATTACTGGC	8613	False	NA	35	True	GATAAA	-14	NA	8734480	8748274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.19	chr19	+	4594	22	Fusion	ENSMUSG00000010097.16_ENSMUSG00000117924.2	novel	2326	21	NA	NA	-2	1491	intron_retention	FALSE	canonical	3	621	junction_4	71.4940017781173	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTTTTAGACTCCTA	8613	False	NA	NA	False	AATAAA	-19	NA	8734480	8751330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937_8748680_8749411
ES.17348.2	chr19	+	4096	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	-37	-17	-3	2	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTGTTTCCCTCAAT	8566	False	NA	49	True	GATAAA	-28	NA	8734433	8748288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.20	chr19	+	4808	18	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-1	2	intron_retention	FALSE	canonical	3	621	junction_3	66.6538338283241	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8614	False	NA	34	True	GATAAA	-13	NA	8734481	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.21	chr19	+	4016	20	NNC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	9	2	intron_retention	FALSE	non_canonical	0	0	junction_8	184.459681126307	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8624	False	NA	34	True	GATAAA	-13	NA	8734491	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741869_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.22	chr19	+	2252	21	NNC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	182.497123264998	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8624	False	NA	34	True	GATAAA	-13	NA	8734491	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742291_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.23	chr19	+	2930	1	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	11	-3680	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTCTACACCATTGAGC	8626	False	NA	NA	False	NA	NA	NA	8734493	8737423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734500_8737400
ES.17348.24	chr19	+	3995	20	NNC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-3	2	intron_retention	FALSE	non_canonical	0	0	junction_15	185.718489496119	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8643	False	NA	34	True	GATAAA	-13	NA	8734510	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745346_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.26	chr19	+	2194	20	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	186.825440324263	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGCTTGTTTCCCTC	8644	False	NA	46	True	GATAAA	-25	NA	8734511	8748285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.27	chr19	+	4545	17	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-1	2	intron_retention	FALSE	canonical	3	621	junction_4	62.6722314406468	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8645	False	NA	34	True	GATAAA	-13	NA	8734512	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.3	chr19	+	2326	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	2	-2	2	2	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTGTTTCCCTCAAT	8571	False	NA	49	True	GATAAA	-28	NA	8734438	8748288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.31	chr19	+	2195	21	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	18	junction_18	178.806487578052	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTCCCATTACTGG	8645	False	NA	34	True	GATAAA	-13	NA	8734512	8748273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746406_8746548_8747623_8747685_8747937
ES.17348.33	chr19	+	4055	18	NNC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_12	194.787027697353	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCCCATTACTG	8645	False	NA	33	True	GATAAA	-12	NA	8734512	8748272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744873_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.34	chr19	+	4767	20	Fusion	ENSMUSG00000010097.16_ENSMUSG00000117924.2	novel	4042	20	NA	NA	-1	4	intron_retention	TRUE	canonical	0	0	junction_16	186.271805691489	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCCTCTCTCTCATCT	8645	False	NA	NA	False	AATAAA	-42	NA	8734512	8749843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8746364_8746548_8747623_8747685_8747937_8748680_8749411
ES.17348.35	chr19	+	4091	19	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	621	junction_4	66.3956760826271	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGCTTGTTTCCCTC	8651	False	NA	46	True	GATAAA	-25	NA	8734518	8748285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.37	chr19	+	4153	16	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-4317	1	intron_retention	FALSE	canonical	3	621	junction_3	69.2636187972365	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCCCATTACTG	3887	False	NA	33	True	GATAAA	-12	NA	8739723	8748272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741971_8742285_8744198_8744443_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.38	chr19	+	1675	18	NNC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	-3144	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	194.292666198208	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCCCATTACTG	143	False	NA	33	True	GATAAA	-12	NA	8740896	8748272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8748049
ES.17348.39	chr19	+	4003	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	8	-3263	8	3263	multi-exon	FALSE	canonical	3	838	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTCTGAGCTATTTAG	6527	False	NA	NA	False	ATTAAA	-17	NA	8748367	8753102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8748680_8749411
ES.17348.40	chr19	+	5752	2	Genic_Genomic	ENSMUSG00000118261.2	novel	295	1	NA	NA	-2476	3081	multi-exon	FALSE	canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAGACACAGACAAAAACA	9313	False	NA	NA	False	AAAAAG	-4	NA	8751153	8757005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8752657_8752756
ES.17348.5	chr19	+	3138	22	Fusion	ENSMUSG00000010097.16_ENSMUSG00000117924.2	novel	2326	21	NA	NA	12	3	multi-exon	FALSE	canonical	3	621	junction_4	71.4940017781173	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCCTCTCTCTCATC	8581	False	NA	NA	False	AATAAA	-41	NA	8734448	8749842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937_8748680_8749411
ES.17348.6	chr19	+	4899	21	Fusion	ENSMUSG00000010097.16_ENSMUSG00000117924.2	novel	4042	20	NA	NA	13	0	intron_retention	FALSE	canonical	3	621	junction_4	64.6738741687863	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTCTGTCCTCTCTCTC	8582	False	NA	NA	False	AATAAA	-38	NA	8734449	8749839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937_8748680_8749411
ES.17348.7	chr19	+	3848	21	FSM	ENSMUSG00000010097.16_ENSMUSG00000117924.2	ENSMUST00000010241.14	2326	21	13	-1535	13	-18	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTACTTAAGCCAT	8582	False	NA	NA	False	AATAAA	-20	NA	8734449	8749821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.8	chr19	+	2365	20	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	621	junction_4	73.1055473451337	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGTTTGTGTCCCATT	8595	False	NA	29	True	GATAAA	-8	NA	8734462	8748268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17348.9	chr19	+	4129	19	NIC	ENSMUSG00000010097.16	novel	4042	20	NA	NA	-7	1	intron_retention	FALSE	canonical	3	621	junction_4	65.1595383048312	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCCCATTACTG	8596	False	NA	33	True	GATAAA	-12	NA	8734463	8748272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ES.17349.1	chr19	-	2909	16	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-7	3	multi-exon	FALSE	canonical	3	151	junction_8	37.3288092496935	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATTTCTTGATGTTAA	9929	False	NA	-1	True	AATATA	-20	NA	8763652	8749885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.10	chr19	-	747	5	FSM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	24	4	2	-3	multi-exon	FALSE	canonical	3	67	junction_4	80.9073544246751	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	5098	False	NA	-8	True	AATATA	-13	NA	8751807	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8750987_8751698
ES.17349.11	chr19	-	4158	14	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	151	junction_7	38.8477532039381	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9924	False	NA	-8	True	AATATA	-13	NA	8763657	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.12	chr19	-	4846	10	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	151	junction_4	36.1908521283732	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9929	False	NA	-8	True	AATATA	-13	NA	8763652	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8752655_8752753_8752883_8755450_8756098_8756214_8756290_8759364_8759460_8759719_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.13	chr19	-	1338	1	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	579	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	5675	False	NA	-8	True	AATATA	-13	NA	8751230	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8749900_8751200
ES.17349.14	chr19	-	705	5	NNC	ENSMUSG00000118346.2	novel	775	5	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	107.522090753482	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	5089	False	NA	-8	True	AATATA	-13	NA	8751816	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8750148_8750391_8750471_8750653_8750789_8750868_8750987_8751698
ES.17349.15	chr19	-	3248	13	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_6	67.5497758858031	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9929	False	NA	-8	True	AATATA	-13	NA	8763652	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.16	chr19	-	6250	13	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	151	junction_6	39.5913149847567	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9928	False	NA	-8	True	AATATA	-13	NA	8763653	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.17	chr19	-	3449	15	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	3	-5	intron_retention	FALSE	canonical	0	0	junction_10	63.3500559734302	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATGGCATGGATTTCT	9955	False	NA	-10	True	AATATA	-11	NA	8763626	8749894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759974_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.18	chr19	-	1008	4	NIC	ENSMUSG00000118346.2	novel	818	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	161	junction_3	44.0302926025556	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATATATTACTTTTC	5077	False	NA	-31	True	NA	NA	NA	8751828	8749915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8750471_8750653_8750789_8750868_8751057_8751698
ES.17349.19	chr19	-	2009	12	NNC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	68.5589569532121	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTCTATGCTCGTGGGC	9939	False	NA	0	True	AATAAA	-17	NA	8763642	8751852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760683_8760750_8761198_8761359_8762485_8762543_8763573
ES.17349.2	chr19	-	849	5	NNC	ENSMUSG00000118346.2	novel	818	5	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	105.570770102335	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGATTTCTTGATGTTA	5085	False	NA	-2	True	AATATA	-19	NA	8751820	8749886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751070_8751698
ES.17349.20	chr19	-	4851	6	NNC	ENSMUSG00000003680.17	novel	2006	11	NA	NA	63	0	intron_retention	TRUE	non_canonical	0	0	junction_3	74.8876491819579	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	NA	False	NA	-5	True	AATAAA	-12	NA	8759978	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8752655_8752753_8752883_8755450_8756800_8757005_8759460_8759719_8759771_8759907
ES.17349.21	chr19	-	1939	12	NNC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.0209375931979	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	9958	False	NA	-5	True	AATAAA	-12	NA	8763623	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759974_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.22	chr19	-	2055	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	8	2	8	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	9909	False	NA	-5	True	AATAAA	-12	NA	8763672	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.23	chr19	-	1966	11	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	60.2213417319807	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	9923	False	NA	-5	True	AATAAA	-12	NA	8763658	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.24	chr19	-	1993	12	NIC	ENSMUSG00000003680.17	novel	2065	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	58.6434808929319	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	9913	False	NA	-5	True	AATAAA	-12	NA	8763668	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763631
ES.17349.25	chr19	-	2704	2	ISM	ENSMUSG00000003680.17	ENSMUST00000189739.7	1794	9	6703	-35	-334	0	3prime_fragment	FALSE	canonical	3	176	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	2245	False	NA	-5	True	AATAAA	-12	NA	8754660	8751857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8752655_8752753
ES.17349.26	chr19	-	5403	8	NNC	ENSMUSG00000003680.17	novel	2006	11	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	91.6406023550697	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGACGTGTCTATGCTC	9919	False	NA	-6	True	AATAAA	-11	NA	8763662	8751858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8752655_8752753_8752883_8755450_8756800_8757005_8759460_8759719_8760059_8760667_8760755_8761198_8761359_8763573
ES.17349.27	chr19	-	1873	9	NIC	ENSMUSG00000003680.17	novel	1567	9	NA	NA	-17	347	intron_retention	FALSE	canonical	1	1	junction_8	68.525428674325	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	9919	False	NA	NA	False	NA	NA	NA	8763662	8754931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763631
ES.17349.28	chr19	-	743	7	ISM	ENSMUSG00000003680.17	ENSMUST00000176688.8	1567	9	-9	4025	-9	-129	5prime_fragment	FALSE	canonical	3	152	junction_6	32.0762979299184	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTTCCTGTCCTCCA	9927	False	NA	NA	False	CATAAA	-33	NA	8763654	8759303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.3	chr19	-	636	4	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	101.226917807908	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5077	False	NA	-5	True	AATATA	-16	NA	8751828	8749889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8750199_8750391_8750471_8750868_8750987_8751698
ES.17349.4	chr19	-	4552	11	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	151	junction_5	34.7403223934379	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	9933	False	NA	-5	True	AATATA	-16	NA	8763648	8749889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.5	chr19	-	3632	14	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_9	62.7925107658869	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	9970	False	NA	-5	True	AATATA	-16	NA	8763611	8749889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759974_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.6	chr19	-	636	4	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_3	106.565577097965	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGGATTTCTTGATG	5094	False	NA	-5	True	AATATA	-16	NA	8751811	8749889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8750199_8750391_8750471_8750653_8750789_8751698
ES.17349.7	chr19	-	505	3	FSM	ENSMUSG00000118346.2	ENSMUST00000235756.2	499	3	-7	1	-7	-1	multi-exon	FALSE	canonical	3	14	junction_2	119.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCATGGATTTCTTGAT	5089	False	NA	-6	True	AATATA	-15	NA	8751816	8749890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8750199_8750391_8750471_8751698
ES.17349.8	chr19	-	3597	14	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	151	junction_6	35.9761591011136	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCATGGATTTCTTGA	9957	False	NA	-7	True	AATATA	-14	NA	8763624	8749891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.17349.9	chr19	-	3573	15	Fusion	ENSMUSG00000003680.17_ENSMUSG00000118346.2	novel	2065	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	151	junction_7	37.4346369131093	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGCATGGATTTCTTG	9900	False	NA	-8	True	AATATA	-13	NA	8763681	8749892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ES.1735.1	chr1	-	131	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	161115478	161115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161115300_161115500
ES.17350.1	chr19	+	177	1	Intergenic	novelGene_14411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTTTAATT	6563	False	NA	NA	False	NA	NA	NA	8763993	8764170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_8764000_8764200
ES.17351.1	chr19	+	254	1	Intergenic	novelGene_14412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAACAAAAGCAAAC	1982	False	NA	NA	False	NA	NA	NA	8773045	8773299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_8773000_8773300
ES.17352.1	chr19	-	918	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	-27	-1	-27	1	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTGGTTTTATGTT	NA	False	NA	0	True	ATTAAA	-18	NA	8775968	8770489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ES.17352.10	chr19	-	1334	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	1319	junction_4	70.8543106192794	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGGTTTGGTTTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	8775911	8770492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770769_8770989_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ES.17352.12	chr19	-	530	2	ISM	ENSMUSG00000071662.5	ENSMUST00000237207.2	342	5	-20	3731	-20	2	5prime_fragment	FALSE	canonical	3	1360	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTGACTCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	8775919	8775264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8775698_8775822
ES.17352.13	chr19	-	443	3	FSM	ENSMUSG00000071662.5	ENSMUST00000236566.2	414	3	-27	-2	-17	2	multi-exon	FALSE	canonical	2	3	junction_1	678.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTGACTCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	8775916	8775264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8775504_8775587_8775698_8775822
ES.17352.2	chr19	-	1743	1	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	3583	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	2216	False	NA	-2	True	ATTAAA	-16	NA	8772234	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770500_8772200
ES.17352.3	chr19	-	979	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	1319	junction_4	83.7337048824028	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775919	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771895_8774599_8774760_8775587_8775698_8775822
ES.17352.5	chr19	-	710	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	548.478324295703	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775922	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8775587_8775698_8775822
ES.17352.6	chr19	-	1567	6	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	19	-1	intron_retention	FALSE	canonical	3	1319	junction_3	70.1044934365837	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775922	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ES.17352.7	chr19	-	786	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	533.206234855603	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775872	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770769_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ES.17352.8	chr19	-	1721	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1319	junction_5	85.9626857033523	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775945	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8775698_8775822
ES.17352.9	chr19	-	970	8	NNC	ENSMUSG00000071662.5	novel	890	8	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	506.412028744522	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTGGTTTTATG	NA	False	NA	-2	True	ATTAAA	-16	NA	8775919	8770491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8770769_8770989_8771127_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ES.17353.1	chr19	+	1913	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-57	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGTGTTGGCTGGTT	5371	False	NA	18	True	CATAAA	-23	NA	8779861	8782216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8779896_8780337
ES.17353.3	chr19	+	2055	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	-52	1	-52	-1	multi-exon	FALSE	canonical	3	20	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGAACTGGTGTTG	5376	False	NA	11	True	CATAAA	-16	NA	8779866	8782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8780050_8780337
ES.17353.4	chr19	+	1360	3	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGAACTGGTGTTG	5388	False	NA	11	True	CATAAA	-16	NA	8779878	8782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8779896_8780337_8780578_8781106
ES.17353.5	chr19	+	2042	1	Genic_Genomic	ENSMUSG00000071661.8	novel	NA	NA	NA	NA	258	8	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTTGGCTGGTTTC	5686	False	NA	20	True	CATAAA	-25	NA	8780176	8782218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8780200_8782200
ES.17354.1	chr19	+	1887	1	Antisense	novelGene_ENSMUSG00000071660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACAGTTTGATTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	8786470	8788357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_8786500_8788400
ES.17355.1	chr19	+	4614	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-1563	2067	-1563	-2067	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGTATTTTCTTTACC	NA	False	NA	25	True	AATAAA	-35	NA	8795810	8809440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.10	chr19	+	5325	23	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	-5	7	intron_retention	FALSE	canonical	0	0	junction_18	49.3132171778495	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTTAGAGTCAGTTC	NA	False	NA	37	True	AATAAA	-37	NA	8797368	8826054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808588_8808697_8808818_8808890_8816939_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.11	chr19	+	5162	22	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_17	50.3732103152094	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8797375	8826031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8816939_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.12	chr19	+	2670	13	NIC	ENSMUSG00000071659.5	novel	5118	14	NA	NA	-36	-2086	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	35.0605626816735	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTTGCACCAACTAAC	NA	False	NA	6	True	AATAAA	-16	NA	8797599	8809421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8798178_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.13	chr19	+	2450	13	NIC	ENSMUSG00000071659.5	novel	5118	14	NA	NA	-36	-2368	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	34.7022053413836	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGGTTATTTGTAATC	NA	False	NA	17	True	TATAAA	-13	NA	8797599	8809139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808588_8808697_8808818
ES.17355.14	chr19	+	2322	15	NNC	ENSMUSG00000071659.5	novel	5118	14	NA	NA	91	-2383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.3139059032503	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTTCAAACCTAGTT	NA	False	NA	2	True	TTTAAA	-32	NA	8797726	8809124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8797866_8797925_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.15	chr19	+	3678	25	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	97	0	multi-exon	FALSE	canonical	0	0	junction_20	46.2694215978545	333	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8797732	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818_8808890_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825516_8825827
ES.17355.16	chr19	+	3417	23	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	224	0	multi-exon	FALSE	canonical	0	0	junction_18	49.4389388810677	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8797859	8826031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808588_8808697_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.17	chr19	+	1812	12	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	3219	2367	2957	-2367	3prime_fragment	FALSE	canonical	3	96	junction_2	14.6417268547551	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGGTTATTTGTAATCA	NA	False	NA	18	True	TATAAA	-14	NA	8800592	8809140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.18	chr19	+	1426	7	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	5259	2069	4997	-2069	3prime_fragment	FALSE	canonical	3	98	junction_6	14.9712687801966	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTTGTATTTTCTTTA	84	False	NA	23	True	AATAAA	-33	NA	8802632	8809438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.19	chr19	+	2946	3	NIC	ENSMUSG00000118124.2	novel	599	5	NA	NA	27	-6996	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	48	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCTATCTCCTGTGG	4318	False	NA	13	True	AATAAA	-16	NA	8807163	8811505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8807315_8808588_8808697_8808818
ES.17355.2	chr19	+	5591	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-466	-7	-466	7	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGTGGCTGCACTGA	NA	False	NA	22	True	AATAAA	-25	NA	8796907	8811514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.20	chr19	+	2335	1	ISM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	11678	121	11416	-121	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTAACTGTGTCATT	6206	False	NA	NA	False	AGTAAA	-28	NA	8809051	8811386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8809100_8811400
ES.17355.21	chr19	+	3329	11	NNC	ENSMUSG00000071657.13	novel	1962	12	NA	NA	-56	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	63.5390431152374	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8814774	8826028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8815229_8816939_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825437_8825526_8825827
ES.17355.22	chr19	+	1915	12	FSM	ENSMUSG00000071657.13	ENSMUST00000171649.8	1962	12	33	14	33	2	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGTGGACATCCGAG	NA	False	NA	16	True	AATAAA	-16	NA	8814863	8826033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.23	chr19	+	7858	7	NIC	ENSMUSG00000071657.13	novel	1962	12	NA	NA	88	-2	intron_retention	FALSE	canonical	0	0	junction_2	59.9205492483357	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8814918	8826028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8815229_8816939_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.24	chr19	+	3974	7	NIC	ENSMUSG00000071657.13	novel	1684	12	NA	NA	-91	0	intron_retention	FALSE	canonical	3	57	junction_1	41.8436242322398	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8814959	8826031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8825347_8825444_8825526_8825827
ES.17355.25	chr19	+	1690	12	NNC	ENSMUSG00000071657.13	novel	1962	12	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1223692476422	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGGACATCCGAGG	NA	False	NA	17	True	AATAAA	-17	NA	8815045	8826034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8815229_8816983_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.26	chr19	+	2030	12	NNC	ENSMUSG00000071657.13	novel	1962	12	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_3	65.9655557503652	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8815060	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8815229_8816939_8817149_8818471_8818789_8819792_8819967_8820372_8820455_8822534_8822679_8823553_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.27	chr19	+	1762	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	33	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8816724	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.28	chr19	+	2508	10	NIC	ENSMUSG00000071657.13	novel	1795	11	NA	NA	98	-2	intron_retention	FALSE	canonical	0	0	junction_5	50.2020608499317	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8816851	8826028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.29	chr19	+	1586	11	NNC	ENSMUSG00000071657.13	novel	1795	11	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.1019134470775	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8816890	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825516_8825827
ES.17355.3	chr19	+	3212	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	-461	2367	-461	-2367	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGGTTATTTGTAATCA	NA	False	NA	18	True	TATAAA	-14	NA	8796912	8809140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.30	chr19	+	2808	9	NIC	ENSMUSG00000071657.13	novel	1911	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_4	52.5779183688362	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCTTGTGTGGACATC	NA	False	NA	12	True	AATAAA	-12	NA	8817875	8826029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8818789_8820372_8820455_8822534_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.31	chr19	+	1371	11	NNC	ENSMUSG00000071657.13	novel	1388	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.3068539179207	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8817900	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825276_8825347_8825444_8825526_8825827
ES.17355.32	chr19	+	5000	7	NIC	ENSMUSG00000071657.13	novel	1911	10	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	59.1711265924709	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8817905	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8818789_8820372_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.33	chr19	+	1645	11	NNC	ENSMUSG00000071657.13	novel	1388	11	NA	NA	27	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	61.8802068516258	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGTGTGGACAT	NA	False	NA	11	True	AATAAA	-11	NA	8817925	8826028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8818235_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.4	chr19	+	4423	24	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	-447	0	multi-exon	FALSE	canonical	0	0	junction_19	42.3791063832756	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8796926	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.5	chr19	+	2768	1	Genic_Genomic	ENSMUSG00000071659.5	novel	NA	NA	NA	NA	-447	-920	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTGCATTTTAATGC	NA	False	NA	NA	False	AATACA	-12	NA	8796926	8799694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8796900_8799700
ES.17355.6	chr19	+	2973	13	NIC	ENSMUSG00000071659.5	novel	5118	14	NA	NA	-47	-2069	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	34.826853464277	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTTGTATTTTCTTTA	NA	False	NA	23	True	AATAAA	-33	NA	8797326	8809438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ES.17355.7	chr19	+	3902	23	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	-35	0	multi-exon	FALSE	canonical	0	0	junction_15	53.9088034638972	333	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8797338	8826030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808588_8808697_8808818_8808890_8816939_8817149_8818471_8818789_8822534_8822679_8823577_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.8	chr19	+	4083	25	Fusion	ENSMUSG00000071659.5_ENSMUSG00000071657.13	novel	5118	14	NA	NA	-35	0	multi-exon	FALSE	canonical	0	0	junction_20	41.4389611356269	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8797338	8826031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818_8808890_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ES.17355.9	chr19	+	2678	1	Genic_Genomic	ENSMUSG00000071659.5	novel	NA	NA	NA	NA	-5	-568	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTTTGTCTCAATCAG	NA	False	NA	NA	False	AATAAA	-16	NA	8797368	8800046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8797400_8800000
ES.17356.1	chr19	-	6327	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	45	-2863	6	2863	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCCCACAGGGTATAT	1930	False	NA	NA	False	NA	NA	NA	8796652	8783575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.10	chr19	-	3596	4	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-848	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	116.57710848285	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTAGAAATTTATTT	1037	False	NA	-8	True	AATAAA	-16	NA	8797545	8786433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8789203_8793217_8793401_8795799_8796049_8797150
ES.17356.11	chr19	-	3386	4	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.143979956661	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTAGAAATTTATTT	1978	False	NA	-8	True	AATAAA	-16	NA	8796604	8786433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8789203_8793217_8793387_8795799_8796020_8796376
ES.17356.13	chr19	-	5924	3	NIC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-14	2	intron_retention	FALSE	canonical	3	197	junction_2	29	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCATCTTAGAAATTTA	1871	False	NA	-11	True	AATAAA	-13	NA	8796711	8786436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8789203_8793217_8796049_8796384
ES.17356.14	chr19	-	2276	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	14	junction_2	116.855412797183	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCATCTTAGAAATTTA	1988	False	NA	-11	True	AATAAA	-13	NA	8796594	8786436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8787461_8788210_8788281_8788998_8789203_8793217_8793401_8795799
ES.17356.16	chr19	-	3337	3	NIC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	97	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCATCTTAGAAATTTA	1876	False	NA	-11	True	AATAAA	-13	NA	8796706	8786436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_8789203_8795799_8796049_8796384
ES.17356.17	chr19	-	2819	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-26	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	96.3700549963525	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCATCTTAGAAATTTA	1859	False	NA	-11	True	AATAAA	-13	NA	8796723	8786436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8788281_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.19	chr19	-	2056	3	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	6	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.5	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTGGTTTTGCTTCCTG	1930	False	NA	-105	True	NA	NA	NA	8796652	8786530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8788281_8796010_8796049_8796384
ES.17356.2	chr19	-	4181	1	Genic_Genomic	ENSMUSG00000071660.11	novel	NA	NA	NA	NA	8332	2663	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATCTCGGG	NA	False	NA	NA	False	NA	NA	NA	8787956	8783775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_8783800_8788000
ES.17356.20	chr19	-	3417	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	-1	93	-1	-93	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCTGGTTTTGCTTCCT	1884	False	NA	-106	True	NA	NA	NA	8796698	8786531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.21	chr19	-	1823	6	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	22	-95	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	107.776806410285	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGCTGGTTTTGCTTC	2008	False	NA	-108	True	NA	NA	NA	8796574	8786533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8787461_8788210_8788281_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.22	chr19	-	2878	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	-420	1051	-420	1010	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCAGCTGTCACTCT	1465	False	NA	-8	True	AATAAA	-18	NA	8797117	8787489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.23	chr19	-	1646	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-9	1008	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	96.3700549963525	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1977	False	NA	-10	True	AATAAA	-16	NA	8796605	8787491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8788281_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.24	chr19	-	1119	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	6	1008	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	101.019800039398	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1930	False	NA	-10	True	AATAAA	-16	NA	8796652	8787491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8787707_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.25	chr19	-	2685	3	NNC	ENSMUSG00000071660.11	novel	1585	3	NA	NA	-8	1008	intron_retention	FALSE	canonical	2	9	junction_2	123	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTCAGCTGTCACT	1978	False	NA	-10	True	AATAAA	-16	NA	8796604	8787491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8789203_8793217_8793387_8795799
ES.17356.27	chr19	-	1819	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	86	1604	-15	457	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAATTTAGTCTTTTTT	1971	False	NA	NA	False	NA	NA	NA	8796611	8788042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.28	chr19	-	1301	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	-13	2221	-13	0	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGTGGTGGCGCAC	1872	False	NA	NA	False	ATTAAA	-12	NA	8796710	8788659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.3	chr19	-	4917	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	72	-1480	-29	1480	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAGGATGTGAGCTGG	1957	False	NA	NA	False	AATAAA	-15	NA	8796625	8784958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.4	chr19	-	4998	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	-1476	-13	-1476	13	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTATTTCACTGATA	409	False	NA	0	True	AATAAA	-24	NA	8798173	8786425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.6	chr19	-	1991	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-12	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	101.443025881526	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTAGAAATTTATTTCAC	1873	False	NA	-5	True	AATAAA	-19	NA	8796709	8786430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8787461_8788998_8789203_8793217_8793401_8795799_8796049_8796384
ES.17356.7	chr19	-	3543	4	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	115.635442471396	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTAGAAATTTATTTC	1876	False	NA	-7	True	AATAAA	-17	NA	8796706	8786432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8789203_8793217_8793401_8795799_8796068_8796384
ES.17356.9	chr19	-	3318	5	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	-29	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	102.28972333524	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTAGAAATTTATTT	1957	False	NA	-8	True	AATAAA	-16	NA	8796625	8786433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_8789203_8793217_8793401_8795799_8795860_8795983_8796049_8796384
ES.17357.1	chr19	-	3521	1	Antisense	novelGene_ENSMUSG00000071659.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	2780	False	NA	NA	False	NA	NA	NA	8806600	8803079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8803100_8806600
ES.17358.1	chr19	-	783	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	-15	875	-15	-875	multi-exon	TRUE	canonical	3	189	junction_2	8	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTCTGTGTTAGCGTT	4747	False	NA	-2	True	AATAAA	-21	NA	8816573	8815171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8815636_8815917_8816018_8816354
ES.17359.1	chr19	-	204	1	Intergenic	novelGene_14413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	8827319	8827115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8827100_8827300
ES.1736.1	chr1	-	190	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161116368	161116178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161116200_161116400
ES.17360.1	chr19	+	2714	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	-230	99	-213	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATTTTCAGTTTCATG	1205	False	NA	NA	False	ATTAAA	-15	NA	8827918	8831174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8828477_8829018
ES.17360.2	chr19	+	2791	1	Genic_Genomic	ENSMUSG00000071656.8	novel	NA	NA	NA	NA	1014	680	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAGA	2449	False	NA	NA	False	NA	NA	NA	8829162	8831953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_8829200_8832000
ES.17361.1	chr19	-	193	1	Intergenic	novelGene_14414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	8841168	8840975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8841000_8841200
ES.17362.1	chr19	-	209	1	Intergenic	novelGene_14415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAACCAGTTTGATTCTA	NA	False	NA	NA	False	NA	NA	NA	8842810	8842601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8842600_8842800
ES.17363.1	chr19	+	1113	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	-71	-9	-8	1	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGGCTCCTTCCAGAA	5841	False	NA	34	True	AATAAA	-22	NA	8848851	8853029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.12	chr19	+	4294	2	NNC	ENSMUSG00000071655.13	novel	2847	3	NA	NA	4	547	intron_retention	FALSE	non_canonical	0	0	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTGGGTGTGGTGGT	6017	False	NA	NA	False	NA	NA	NA	8849027	8853774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8850047_8850499
ES.17363.13	chr19	+	932	7	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	289	1	289	0	3prime_fragment	FALSE	canonical	3	1115	junction_2	97.3990930827045	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCTGGCTCCTTCCAG	6302	False	NA	32	True	AATAAA	-20	NA	8849312	8853027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.2	chr19	+	1030	10	NNC	ENSMUSG00000071655.13	novel	1033	10	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	488.872651245498	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATATGCCTGGCTCCTTC	5844	False	NA	29	True	AATAAA	-17	NA	8848854	8853024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851577_8851620_8852523_8852717_8852885
ES.17363.3	chr19	+	1183	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-90	198	7	1	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGGCTCCTTCCAGAA	5856	False	NA	34	True	AATAAA	-22	NA	8848866	8853029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.4	chr19	+	1277	8	FSM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	-149	-1	15	1	multi-exon	FALSE	canonical	3	1115	junction_3	101.556257657457	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGGCTCCTTCCAGAA	5864	False	NA	34	True	AATAAA	-22	NA	8848874	8853029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.5	chr19	+	2178	7	NIC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	15	-2	intron_retention	FALSE	canonical	3	1115	junction_3	122.618196945732	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATGCCTGGCTCCTTCC	5864	False	NA	30	True	AATAAA	-18	NA	8848874	8853025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8849121_8849222_8849277_8849371_8849652_8850877_8851070_8851158_8851211_8851502_8852717_8852885
ES.17363.6	chr19	+	1271	8	NIC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	19	-1	intron_retention	FALSE	canonical	3	1115	junction_3	114.325885796985	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCCTGGCTCCTTCCA	5868	False	NA	31	True	AATAAA	-19	NA	8848878	8853026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8849121_8849222_8849277_8849371_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.7	chr19	+	1116	9	NNC	ENSMUSG00000071655.13	novel	1291	9	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_8	447.709936789435	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATATGCCTGGCTCCT	5925	False	NA	27	True	AATAAA	-15	NA	8848935	8853022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852726_8852885
ES.17363.8	chr19	+	1313	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	-20	-2	14	2	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGGGCTGGAGAGAT	5926	False	NA	5	True	ATTAAA	-18	NA	8848936	8853229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ES.17363.9	chr19	+	1293	7	NIC	ENSMUSG00000071655.13	novel	1127	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1115	junction_3	106.067588514745	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCTGGCTCCTTCCAG	5935	False	NA	32	True	AATAAA	-20	NA	8848945	8853027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851211_8851502_8851620_8852523_8852717_8852885
ES.17364.1	chr19	-	341	1	Intergenic	novelGene_14416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	8850788	8850447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8850400_8850800
ES.17365.1	chr19	-	185	1	Intergenic	novelGene_14417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACTGAGCCAATCTCT	NA	False	NA	NA	False	NA	NA	NA	8853448	8853263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8853300_8853400
ES.17366.1	chr19	-	818	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	1	2	1	-2	multi-exon	FALSE	canonical	3	500	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTTGGAAAGACCATC	NA	False	NA	-10	True	AATGAA	-23	NA	8858286	8857379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8857981_8858069
ES.17366.2	chr19	-	553	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	16	252	16	-252	multi-exon	FALSE	canonical	3	500	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGCAGCTGGACATCTA	NA	False	NA	-7	True	AATAAA	-22	NA	8858271	8857629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8857981_8858069
ES.17367.1	chr19	+	683	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	1	122	1	13	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGATGAGCCATGTAG	NA	False	NA	45	True	AATAAA	-34	NA	8866217	8868123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ES.17367.10	chr19	+	497	3	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1722.5	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTCACCGTGTGGGATG	NA	False	NA	19	True	AATAAA	-8	NA	8866259	8868097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866593_8867774
ES.17367.100	chr19	+	3758	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	275.389780476557	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1907	False	NA	NA	False	NA	NA	NA	8875478	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875546_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.101	chr19	+	3807	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	275.389780476557	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1907	False	NA	NA	False	NA	NA	NA	8875478	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875595_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.102	chr19	+	3780	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	276.455406317944	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1907	False	NA	-62	True	GATAAA	-36	NA	8875478	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888634_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.103	chr19	+	3738	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	275.411463959203	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1907	False	NA	-56	True	GATAAA	-42	NA	8875478	8894036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888708_8888988_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.104	chr19	+	5705	21	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-6	intron_retention	FALSE	canonical	3	992	junction_1	109.633252254961	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1907	False	NA	-62	True	GATAAA	-36	NA	8875478	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.105	chr19	+	5036	23	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-44	intron_retention	FALSE	canonical	0	0	junction_18	267.492863116349	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1907	False	NA	NA	False	NA	NA	NA	8875478	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892048_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.106	chr19	+	3730	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	276.455406317944	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1907	False	NA	NA	False	NA	NA	NA	8875478	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888646_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.107	chr19	+	7175	19	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-6	intron_retention	FALSE	canonical	3	992	junction_1	111.68335972519	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1907	False	NA	-62	True	GATAAA	-36	NA	8875478	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.108	chr19	+	3163	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	14	683	3	-683	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAAGGGGCCTTGTCGTT	1907	False	NA	NA	False	NA	NA	NA	8875478	8893353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.109	chr19	+	6549	21	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-12	intron_retention	FALSE	canonical	3	8	junction_2	277.1081512695	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAATAATAATTGGATGT	1907	False	NA	-68	True	GATAAA	-30	NA	8875478	8894024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879750_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.11	chr19	+	1530	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	-2	967	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	1387.41215938163	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACCTTGTGGTTTTGA	NA	False	NA	NA	False	ACTAAA	-11	NA	8866260	8869212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868258_8868456
ES.17367.111	chr19	+	3849	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	348.892571524572	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1907	False	NA	-56	True	GATAAA	-42	NA	8875478	8894036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885988_8886112_8886268_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.112	chr19	+	6491	21	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	4	-44	intron_retention	FALSE	canonical	1	15	junction_7	275.78098194038	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1908	False	NA	NA	False	NA	NA	NA	8875479	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886544_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.113	chr19	+	3725	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	273.885298801909	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1908	False	NA	-62	True	GATAAA	-36	NA	8875479	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890271_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.115	chr19	+	3831	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_9	349.054675755342	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1908	False	NA	-62	True	GATAAA	-36	NA	8875479	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886544_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.116	chr19	+	3584	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	355.795368217981	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTGTGGTTTCACT	1909	False	NA	NA	False	ATTAAA	-44	NA	8875480	8893789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875595_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892083_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.117	chr19	+	6876	21	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-44	intron_retention	FALSE	canonical	3	992	junction_1	107.776156917938	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1909	False	NA	NA	False	NA	NA	NA	8875480	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889940_8890074_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.118	chr19	+	3246	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	5	-44	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	341.171813896198	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1909	False	NA	NA	False	NA	NA	NA	8875480	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885988_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893139_8893679
ES.17367.12	chr19	+	2578	4	NIC	ENSMUSG00000071653.10	novel	806	4	NA	NA	-2	1746	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	1556.0570540811	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866260	8869991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8866329_8866487_8866683_8867366_8867465_8867774
ES.17367.120	chr19	+	3757	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	275.182221806729	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1909	False	NA	-62	True	GATAAA	-36	NA	8875480	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891977_8892074_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.121	chr19	+	3859	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	351.736604419968	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATTGGATGTCTG	1909	False	NA	-65	True	GATAAA	-33	NA	8875480	8894027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888047_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.123	chr19	+	3751	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-44	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	274.637344652006	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1909	False	NA	NA	False	NA	NA	NA	8875480	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879750_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.126	chr19	+	3787	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-44	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	262.371286293786	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1909	False	NA	NA	False	NA	NA	NA	8875480	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885988_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.128	chr19	+	4113	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	273.977218155183	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1909	False	NA	-62	True	GATAAA	-36	NA	8875480	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875865_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.129	chr19	+	6542	21	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	5	0	intron_retention	FALSE	canonical	3	992	junction_1	107.263821953164	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1909	False	NA	-56	True	GATAAA	-42	NA	8875480	8894036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.131	chr19	+	5954	21	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	2915	-44	intron_retention	FALSE	canonical	2	12	junction_14	275.101485819324	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	4832	False	NA	NA	False	NA	NA	NA	8878403	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.132	chr19	+	4104	23	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	3782	6	3764	-6	3prime_fragment	FALSE	canonical	3	708	junction_4	140.521409503768	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	5681	False	NA	-62	True	GATAAA	-36	NA	8879252	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.133	chr19	+	9058	18	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	4201	-44	intron_retention	FALSE	canonical	3	1001	junction_7	98.0486426840266	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	6118	False	NA	NA	False	NA	NA	NA	8879689	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8879733_8879885_8879995_8882298_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.134	chr19	+	6227	16	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-3658	-44	intron_retention	FALSE	canonical	3	708	junction_2	158.407266948907	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	8392	False	NA	NA	False	NA	NA	NA	8881963	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.135	chr19	+	2964	20	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	9155	382	-996	-382	3prime_fragment	FALSE	canonical	3	708	junction_1	147.435567409618	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTCTTCCTGTTTCTT	706	False	NA	NA	False	NA	NA	NA	8884625	8893654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.136	chr19	+	7050	13	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-879	-44	intron_retention	FALSE	canonical	3	1001	junction_4	117.794636503064	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	823	False	NA	NA	False	NA	NA	NA	8884742	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8886112_8886284_8886373_8886454_8886978_8887829_8887984_8888071_8888308_8888398_8889940_8890074_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.137	chr19	+	3350	19	NIC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-703	-44	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	354.993501070751	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	999	False	NA	NA	False	NA	NA	NA	8884918	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.139	chr19	+	4911	13	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	933	-44	intron_retention	FALSE	non_canonical	0	0	junction_1	353.194577707844	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	2635	False	NA	NA	False	NA	NA	NA	8886554	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8886797_8887887_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.14	chr19	+	715	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1620.00408950101	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTGGGATGAAGTGCA	NA	False	NA	26	True	AATAAA	-15	NA	8866261	8868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8866996_8867092_8867366_8867465_8867774
ES.17367.140	chr19	+	2785	16	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	1249	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	320.802992504746	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	2951	False	NA	NA	False	NA	NA	NA	8886870	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8886978_8887829_8887984_8888071_8888308_8888398_8888481_8888650_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.141	chr19	+	2957	15	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	1305	-6	intron_retention	FALSE	canonical	3	1001	junction_2	106.608668330794	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	3007	False	NA	-62	True	GATAAA	-36	NA	8886926	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.143	chr19	+	1555	8	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	4681	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	451.41704325244	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1353	False	NA	NA	False	NA	NA	NA	8890302	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892390_8892518_8892635_8892767_8892869_8892988
ES.17367.15	chr19	+	2227	6	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	-1	1744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1570.15094815753	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTTTTTGTTTTTT	NA	False	NA	13	True	NA	NA	NA	8866261	8869989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868258_8868456_8869086_8869164
ES.17367.16	chr19	+	2427	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	0	1746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1396.00770055183	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866262	8869991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8869091_8869169
ES.17367.17	chr19	+	815	4	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1523.50655470274	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTGGGATGAAGTGCA	NA	False	NA	26	True	AATAAA	-15	NA	8866266	8868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867574
ES.17367.18	chr19	+	3507	5	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	4	-9	multi-exon	FALSE	non_canonical	0	0	junction_4	1396.00770055183	605	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAAACAGTCCAGTGT	NA	False	NA	11	True	AATAAA	-12	NA	8866266	8875243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8867876_8872122
ES.17367.19	chr19	+	2302	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	5	1746	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	1387.41215938163	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866267	8869991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868258_8868456
ES.17367.2	chr19	+	2541	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	12	-1747	12	1747	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTTGTTTTTTTTC	NA	False	NA	16	True	NA	NA	NA	8866228	8869992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ES.17367.20	chr19	+	450	4	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1523.50655470274	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCGTGTGGGATGAAGTG	NA	False	NA	24	True	AATAAA	-13	NA	8866267	8868102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867936
ES.17367.21	chr19	+	3411	4	FSM	ENSMUSG00000116347.2	ENSMUST00000191089.2	568	4	-22	-2821	-22	2658	multi-exon	FALSE	canonical	1	6	junction_3	1520.70166553324	605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCAGTGTTTCTAT	NA	False	NA	17	True	AATAAA	-18	NA	8866267	8875249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8872122
ES.17367.22	chr19	+	2219	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	5	1746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1396.00770055183	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866267	8869991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868212_8868493
ES.17367.23	chr19	+	1150	2	ISM	ENSMUSG00000071653.10	ENSMUST00000187037.7	793	4	-24	252	6	-252	intron_retention	FALSE	canonical	3	3445	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTGTAGCTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	8866268	8867577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8866329_8866487
ES.17367.25	chr19	+	3712	5	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	-7	-6	multi-exon	FALSE	canonical	2	4	junction_4	1394.28852824657	605	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACAGTCCAGTGTTTC	NA	False	NA	14	True	AATAAA	-15	NA	8866271	8875246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868083_8872122
ES.17367.26	chr19	+	613	4	NNC	ENSMUSG00000071653.10	novel	806	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1451.77064304249	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTGGGATGAAGTGCA	NA	False	NA	26	True	AATAAA	-15	NA	8866279	8868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8866340_8866487_8866613_8867366_8867465_8867774
ES.17367.27	chr19	+	612	3	FSM	ENSMUSG00000071653.10	ENSMUST00000186647.7	784	3	166	6	126	-1	multi-exon	FALSE	canonical	3	2965	junction_1	112.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTGGGATGAAGTGCA	NA	False	NA	26	True	AATAAA	-15	NA	8866428	8868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866613_8867366_8867465_8867774
ES.17367.28	chr19	+	569	3	FSM	ENSMUSG00000096740.9	ENSMUST00000190530.2	387	3	-87	-95	-87	95	multi-exon	FALSE	canonical	3	24	junction_1	1583	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCAGCAGGGATGAGCC	NA	False	NA	39	True	AATAAA	-28	NA	8866554	8868117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866683_8867366_8867465_8867774
ES.17367.29	chr19	+	531	2	ISM	ENSMUSG00000096740.9	ENSMUST00000190530.2	387	3	622	-82	622	82	3prime_fragment	FALSE	canonical	3	3190	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTGTGGGATGAAGTGCA	NA	False	NA	26	True	AATAAA	-15	NA	8867263	8868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8867465_8867774
ES.17367.30	chr19	+	3400	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	-49	-77	-49	77	multi-exon	FALSE	canonical	3	204	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCATAATAAAGAACGCG	NA	False	NA	97	True	NA	NA	NA	8870319	8875329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8870513_8872122
ES.17367.31	chr19	+	2310	2	NNC	ENSMUSG00000071652.9	novel	3274	2	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAAACAGTCCAGTGT	NA	False	NA	11	True	AATAAA	-12	NA	8870378	8875243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8870497_8873051
ES.17367.33	chr19	+	4324	25	Fusion	ENSMUSG00000071650.7_ENSMUSG00000071652.9	novel	675	3	NA	NA	22	66	multi-exon	FALSE	canonical	2	7	junction_2	324.81853908503	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATAAGCTGCTTCA	NA	False	NA	10	True	AGTAAA	-18	NA	8870390	8894102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8870513_8872122_8872524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.34	chr19	+	3494	2	FSM	ENSMUSG00000071650.7_ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	29	-249	29	249	multi-exon	FALSE	canonical	3	204	junction_1	0	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCGGCGCGTAGGAGG	NA	False	NA	NA	False	NA	NA	NA	8870397	8875501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8870513_8872122
ES.17367.35	chr19	+	5520	24	Fusion	ENSMUSG00000071650.7_ENSMUSG00000071652.9	novel	675	3	NA	NA	43	0	intron_retention	FALSE	canonical	2	7	junction_2	322.126253589207	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	NA	False	NA	-56	True	GATAAA	-42	NA	8870411	8894036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8870513_8872122_8872524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.36	chr19	+	3784	1	NIC	ENSMUSG00000071652.9	novel	3274	2	NA	NA	1093	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAACAGTCCAGTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	8871461	8875245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8871500_8875200
ES.17367.37	chr19	+	3912	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-57	-67	-21	67	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATAAGCTGCTTCAT	1842	False	NA	11	True	AGTAAA	-19	NA	8875413	8894103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.38	chr19	+	3788	26	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-21	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	344.85701616757	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1842	False	NA	NA	False	NA	NA	NA	8875413	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893328_8893406
ES.17367.39	chr19	+	3973	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-51	-62	-21	62	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTGTATAAGCTGC	1842	False	NA	6	True	AGTAAA	-14	NA	8875413	8894098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.4	chr19	+	2123	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	32	-1349	-14	1349	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCTGTCTCAAATGCTG	NA	False	NA	NA	False	NA	NA	NA	8866248	8869594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ES.17367.40	chr19	+	4413	24	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-20	-6	intron_retention	FALSE	canonical	1	1	junction_5	262.558518097073	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1843	False	NA	-62	True	GATAAA	-36	NA	8875414	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8885281_8885988_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.43	chr19	+	3804	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	-50	34	-14	-34	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACGAAACAA	1849	False	NA	-90	True	GATAAA	-8	NA	8875420	8894002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.44	chr19	+	3641	23	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	352.756117025876	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1849	False	NA	-62	True	GATAAA	-36	NA	8875420	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885988_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.48	chr19	+	3784	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-12	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	276.020197337757	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1851	False	NA	NA	False	NA	NA	NA	8875422	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884586_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.49	chr19	+	3790	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-12	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	276.035243359538	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAACGAAACA	1851	False	NA	-91	True	GATAAA	-7	NA	8875422	8894001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879896_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.5	chr19	+	3901	6	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	-14	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1574.77051026491	605	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCAGTGTTTCTATCTG	NA	False	NA	20	True	AATAAA	-21	NA	8866248	8875252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868083_8869660_8869821_8872122
ES.17367.50	chr19	+	4831	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-12	-44	intron_retention	FALSE	canonical	2	12	junction_15	270.130186133126	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1851	False	NA	NA	False	NA	NA	NA	8875422	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.52	chr19	+	5185	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-12	66	intron_retention	FALSE	canonical	3	992	junction_1	106.357585297962	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATAAGCTGCTTCA	1851	False	NA	10	True	AGTAAA	-18	NA	8875422	8894102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.53	chr19	+	3840	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	348.837757013682	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1851	False	NA	-62	True	GATAAA	-36	NA	8875422	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885988_8886112_8886284_8886373_8886454_8886552_8886839_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.54	chr19	+	3801	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	275.007131717114	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAATAATTGGATGTC	1857	False	NA	-67	True	GATAAA	-31	NA	8875428	8894025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892083_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.56	chr19	+	4922	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	7	66	intron_retention	FALSE	canonical	2	12	junction_15	270.130186133126	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTATAAGCTGCTTCA	1870	False	NA	10	True	AGTAAA	-18	NA	8875441	8894102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.57	chr19	+	5543	20	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	9	-44	intron_retention	FALSE	canonical	3	992	junction_1	112.263120882369	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1872	False	NA	NA	False	NA	NA	NA	8875443	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8889104_8889227_8889325_8889837_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.58	chr19	+	4327	24	NIC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	13	-6	intron_retention	FALSE	canonical	3	261	junction_5	214.904119826346	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1876	False	NA	-62	True	GATAAA	-36	NA	8875447	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.59	chr19	+	3758	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-14	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	276.139317184776	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1879	False	NA	NA	False	NA	NA	NA	8875450	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887835_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.60	chr19	+	4503	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-11	-44	intron_retention	FALSE	canonical	2	8	junction_23	261.248420550394	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1882	False	NA	NA	False	NA	NA	NA	8875453	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893139_8893679
ES.17367.61	chr19	+	3327	26	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_25	343.873465100173	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGATGTCTGAATTAT	1882	False	NA	-59	True	GATAAA	-39	NA	8875453	8894033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893139_8893679
ES.17367.62	chr19	+	4632	24	NIC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-11	0	intron_retention	FALSE	canonical	3	267	junction_5	213.834237870001	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1882	False	NA	-56	True	GATAAA	-42	NA	8875453	8894036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.64	chr19	+	5756	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-9	-44	intron_retention	FALSE	canonical	0	0	junction_3	268.527804553238	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1884	False	NA	NA	False	NA	NA	NA	8875455	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8880709_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.65	chr19	+	3751	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-9	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	262.745774761478	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1884	False	NA	NA	False	NA	NA	NA	8875455	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884751_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.66	chr19	+	3816	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-9	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	348.583918538835	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAAGGAGAAACAATA	1884	False	NA	NA	False	NA	NA	NA	8875455	8893989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891670_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.67	chr19	+	3620	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-9	249	-9	-249	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGAGTTGTGGTTTCA	1884	False	NA	NA	False	ATTAAA	-42	NA	8875455	8893787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.68	chr19	+	3821	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	-5	44	-5	-44	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1888	False	NA	NA	False	NA	NA	NA	8875459	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.7	chr19	+	3871	5	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	-4	-3	multi-exon	FALSE	canonical	0	0	junction_4	1396.00770055183	605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCAGTGTTTCTAT	NA	False	NA	17	True	AATAAA	-18	NA	8866258	8875249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868226_8872122
ES.17367.70	chr19	+	7444	21	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-5	-35	intron_retention	FALSE	canonical	3	992	junction_1	105.82315436614	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATAAAAAACGAAACA	1888	False	NA	-91	True	GATAAA	-7	NA	8875459	8894001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8886112_8886284_8886373_8886454_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.71	chr19	+	3073	20	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-5	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	301.939061195964	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1888	False	NA	NA	False	NA	NA	NA	8875459	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886365_8888404_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.72	chr19	+	3252	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_24	269.419717866009	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1888	False	NA	-62	True	GATAAA	-36	NA	8875459	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893139_8893679
ES.17367.73	chr19	+	3762	26	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-4	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	344.85701616757	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1889	False	NA	NA	False	NA	NA	NA	8875460	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893722_8893779
ES.17367.74	chr19	+	5213	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-4	-44	intron_retention	FALSE	canonical	3	992	junction_1	103.800764156415	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1889	False	NA	NA	False	NA	NA	NA	8875460	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.76	chr19	+	3873	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-4	-44	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	309.715390744291	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1889	False	NA	NA	False	NA	NA	NA	8875460	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8885988_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.77	chr19	+	3850	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	349.811973303755	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1889	False	NA	-62	True	GATAAA	-36	NA	8875460	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892775_8892869_8892988
ES.17367.78	chr19	+	3329	26	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	344.85701616757	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1889	False	NA	-62	True	GATAAA	-36	NA	8875460	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893470_8893998
ES.17367.79	chr19	+	5054	23	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-4	-44	intron_retention	FALSE	canonical	3	8	junction_2	266.732667882475	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1889	False	NA	NA	False	NA	NA	NA	8875460	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879750_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.8	chr19	+	3739	5	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	-4	-6	multi-exon	FALSE	canonical	0	0	junction_4	1396.00770055183	605	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACAGTCCAGTGTTTC	NA	False	NA	14	True	AATAAA	-15	NA	8866258	8875246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868097_8872122
ES.17367.80	chr19	+	7314	19	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	992	junction_1	112.327343504444	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1889	False	NA	-62	True	GATAAA	-36	NA	8875460	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.83	chr19	+	4854	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-3	-44	intron_retention	FALSE	canonical	0	0	junction_5	262.745774761478	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1890	False	NA	NA	False	NA	NA	NA	8875461	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8884940_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.84	chr19	+	3686	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	281.056599252661	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1890	False	NA	-62	True	GATAAA	-36	NA	8875461	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.86	chr19	+	5121	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	3	-44	intron_retention	FALSE	canonical	3	992	junction_1	106.096242621559	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1896	False	NA	NA	False	NA	NA	NA	8875467	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.87	chr19	+	5075	23	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-2	-12	intron_retention	FALSE	canonical	0	0	junction_19	265.428551809526	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAATAATAATTGGATGT	1897	False	NA	-68	True	GATAAA	-30	NA	8875468	8894024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892274_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.88	chr19	+	3540	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	-1	-251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	276.139317184776	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACATGAGTTGTGGTTT	1898	False	NA	NA	False	ATTAAA	-40	NA	8875469	8893785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887827_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.9	chr19	+	5472	6	Fusion	ENSMUSG00000071653.10_ENSMUSG00000071652.9	novel	500	5	NA	NA	-4	-6	multi-exon	FALSE	non_canonical	0	0	junction_4	1575.0142856495	605	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACAGTCCAGTGTTTC	NA	False	NA	14	True	AATAAA	-15	NA	8866258	8875246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774_8868220_8868534_8870145_8872122
ES.17367.92	chr19	+	3727	24	NNC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	276.139317184776	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1900	False	NA	-62	True	GATAAA	-36	NA	8875471	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887883_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.93	chr19	+	5141	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	1	-6	intron_retention	FALSE	canonical	3	992	junction_1	107.452441623652	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1905	False	NA	-62	True	GATAAA	-36	NA	8875476	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.94	chr19	+	3938	24	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	2	-44	intron_retention	FALSE	canonical	1	1	junction_6	316.370508544568	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1906	False	NA	NA	False	NA	NA	NA	8875477	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8885988_8886112_8886284_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.96	chr19	+	5020	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	2	-44	intron_retention	FALSE	canonical	3	992	junction_1	106.357585297962	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	1906	False	NA	NA	False	NA	NA	NA	8875477	8893992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.98	chr19	+	5303	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	2	-6	intron_retention	FALSE	canonical	3	992	junction_1	108.842456202113	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	1906	False	NA	-62	True	GATAAA	-36	NA	8875477	8894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17367.99	chr19	+	3968	25	NIC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	2	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	350.300047479142	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAATAATAATTGGATGT	1906	False	NA	-68	True	GATAAA	-30	NA	8875477	8894024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8875524_8876559_8876759_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ES.17368.1	chr19	-	386	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	-153	-85	153	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTTCGCTACCTTT	NA	False	NA	-36	True	AATAAA	-18	NA	8866134	8865748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8865700_8866100
ES.17368.2	chr19	-	532	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	-424	314	multi-exon	FALSE	canonical	3	548	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTTCGCTACCTTT	NA	False	NA	-36	True	AATAAA	-18	NA	8866562	8865748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_8865832_8866113
ES.17368.3	chr19	-	231	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	-85	2	-85	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCGTGCAGAAATGTAG	NA	False	NA	-11	True	NA	NA	NA	8866134	8865903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8865900_8866100
ES.17369.1	chr19	-	155	1	Intergenic	novelGene_14418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8867725	8867570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8867600_8867700
ES.1737.1	chr1	+	169	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGC	9302	False	NA	NA	False	NA	NA	NA	161160288	161160457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161160300_161160500
ES.17370.1	chr19	+	1425	5	NNC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	83.3906469575575	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCTTCATGGTTTCC	4711	False	NA	16	True	AATAAA	-13	NA	8897736	8904597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8898013_8899169_8899345_8902901_8903087_8903445_8903737_8904099
ES.17370.10	chr19	+	6705	37	Fusion	ENSMUSG00000071646.10_ENSMUSG00000071647.6	novel	3322	22	NA	NA	-132	10	multi-exon	FALSE	canonical	0	0	junction_17	420.625786738207	885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTGTGTGTGCGCG	1783	False	NA	30	True	AATAAA	-34	NA	8906783	8929677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8917942_8918042_8918266_8918398_8918493_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.12	chr19	+	3453	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	-131	0	-131	0	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	1784	False	NA	6	True	AATAAA	-14	NA	8906784	8918946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.13	chr19	+	5084	17	NIC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-131	-3	intron_retention	FALSE	canonical	3	31	junction_2	13.3298009643805	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGTGCTTTTGT	1784	False	NA	3	True	AATAAA	-11	NA	8906784	8918943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.14	chr19	+	3348	21	NIC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	-131	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	16.1458973117012	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGTGCTTTTGT	1784	False	NA	3	True	AATAAA	-11	NA	8906784	8918943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8918266_8918398_8918493
ES.17370.15	chr19	+	3427	22	NNC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-131	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	15.3774874469598	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGCCTGGTGCTTTTG	1784	False	NA	2	True	AATAAA	-10	NA	8906784	8918942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918515
ES.17370.18	chr19	+	4738	19	NIC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-79	-3	intron_retention	FALSE	canonical	3	31	junction_2	12.7503328448445	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGTGCTTTTGT	1836	False	NA	3	True	AATAAA	-11	NA	8906836	8918943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.19	chr19	+	6717	39	Fusion	ENSMUSG00000071646.10_ENSMUSG00000071647.6	novel	2978	22	NA	NA	-31	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	418.089196436939	885	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCCAGGCTCAGCTATT	1884	False	NA	13	True	AATAAA	-17	NA	8906884	8929660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8907264_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.2	chr19	+	1601	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	3	-1	3	1	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCATGGTTTCCTTCA	4715	False	NA	20	True	AATAAA	-17	NA	8897740	8904601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ES.17370.20	chr19	+	3281	22	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	16.4131742892541	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	1901	False	NA	6	True	AATAAA	-14	NA	8906901	8918946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916603_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.22	chr19	+	4163	20	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	24	-21	intron_retention	FALSE	canonical	0	0	junction_4	17.376234287254	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAATAAAAAGAAAAAAGTA	1939	False	NA	-15	True	NA	NA	NA	8906939	8918925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910558_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.23	chr19	+	3975	22	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.2953188052884	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	1999	False	NA	6	True	AATAAA	-14	NA	8906999	8918946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8908057_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.24	chr19	+	3594	20	NIC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	93	-4	intron_retention	FALSE	canonical	3	31	junction_2	12.6045764014658	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGCCTGGTGCTTTTG	2008	False	NA	2	True	AATAAA	-10	NA	8907008	8918942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.25	chr19	+	3952	19	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	106	-19	intron_retention	FALSE	canonical	0	0	junction_16	21.3704104884404	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	2021	False	NA	-13	True	NA	NA	NA	8907021	8918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908872_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8915894_8916391_8916481_8916551_8916650_8917942_8918042_8918266_8918398_8918493
ES.17370.27	chr19	+	4121	18	NIC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	120	-4	intron_retention	FALSE	canonical	3	31	junction_2	12.1692220539328	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGCCTGGTGCTTTTG	2035	False	NA	2	True	AATAAA	-10	NA	8907035	8918942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8912411_8913667_8914125_8914492_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.29	chr19	+	3680	21	NIC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	135	-2	intron_retention	FALSE	canonical	3	39	junction_2	11.4952163963972	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGTGCTTTTGTG	2050	False	NA	4	True	AATAAA	-12	NA	8907050	8918944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.3	chr19	+	1423	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	-99	-415	-10	-3	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCTTCATGGTTTCC	4723	False	NA	16	True	AATAAA	-13	NA	8897748	8904597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
ES.17370.30	chr19	+	3160	20	NIC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	-46	-19	intron_retention	FALSE	canonical	0	0	junction_14	17.4029958894432	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	2210	False	NA	-13	True	NA	NA	NA	8907210	8918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.31	chr19	+	4375	19	NNC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_7	18.1999355581548	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	2221	False	NA	6	True	AATAAA	-14	NA	8907221	8918946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911431_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.33	chr19	+	3349	20	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	-32	-19	intron_retention	FALSE	canonical	0	0	junction_15	17.391213115502	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	2224	False	NA	-13	True	NA	NA	NA	8907224	8918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916470_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.34	chr19	+	3750	20	NIC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_17	17.4606800056695	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGTGCTTTTGT	2239	False	NA	3	True	AATAAA	-11	NA	8907239	8918943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8917942_8918042_8918266_8918398_8918493
ES.17370.35	chr19	+	2830	20	NNC	ENSMUSG00000071647.6	novel	2978	22	NA	NA	1046	-20	intron_retention	FALSE	non_canonical	0	0	junction_13	17.1685469032788	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAAAAAGAAAAAAGTAA	3302	False	NA	-14	True	NA	NA	NA	8908302	8918926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914853_8914926_8915059_8915825_8915894_8916391_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.36	chr19	+	3259	13	NIC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-203	-19	intron_retention	FALSE	canonical	0	0	junction_2	21.1771627519416	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	6191	False	NA	-13	True	NA	NA	NA	8911191	8918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8911305_8911450_8911521_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.37	chr19	+	4793	27	Fusion	ENSMUSG00000071646.10_ENSMUSG00000071647.6	novel	3135	18	NA	NA	-1077	-11	multi-exon	FALSE	non_canonical	0	0	junction_4	400.967242165667	885	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCTCCAGGCTCAGC	9587	False	NA	9	True	AATAAA	-13	NA	8914587	8929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8914645_8914725_8914852_8914926_8915059_8915825_8915930_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.38	chr19	+	4428	20	Fusion	ENSMUSG00000071646.10_ENSMUSG00000071647.6	novel	3135	18	NA	NA	-1622	-8	multi-exon	FALSE	canonical	3	80	junction_1	256.761484326982	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	1847	False	NA	12	True	AATAAA	-16	NA	8917616	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8918042_8918266_8918398_8918493_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.4	chr19	+	1759	4	NIC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	2	-4	intron_retention	FALSE	canonical	3	186	junction_2	17.6131264181639	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4735	False	NA	15	True	AATAAA	-12	NA	8897760	8904596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8898013_8899169_8899345_8902901_8903737_8904099
ES.17370.40	chr19	+	3410	19	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-166	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	286.944051844413	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3303	False	NA	16	True	AATAAA	-20	NA	8919072	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920283_8920397_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.41	chr19	+	3055	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-47	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	228.507034560755	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3422	False	NA	12	True	AATAAA	-16	NA	8919191	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928499_8928649_8928853
ES.17370.42	chr19	+	4557	16	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-47	-8	intron_retention	FALSE	canonical	3	728	junction_3	75.4422221894934	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3422	False	NA	12	True	AATAAA	-16	NA	8919191	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.45	chr19	+	3266	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-15	-11	intron_retention	FALSE	canonical	3	728	junction_3	72.9170922606627	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCTCCAGGCTCAGC	3454	False	NA	9	True	AATAAA	-13	NA	8919223	8929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.46	chr19	+	3445	16	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	-8	8	-8	-8	intron_retention	FALSE	canonical	3	728	junction_3	77.6055553567026	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3461	False	NA	12	True	AATAAA	-16	NA	8919230	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275
ES.17370.47	chr19	+	5316	13	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-3	-4	intron_retention	FALSE	canonical	2	9	junction_1	248.357423328199	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3466	False	NA	16	True	AATAAA	-20	NA	8919235	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919419_8920828_8920897_8921376_8923238_8923369_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.48	chr19	+	3519	16	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	728	junction_3	73.1705465941651	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3466	False	NA	11	True	AATAAA	-15	NA	8919235	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.49	chr19	+	3762	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-3	-11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	295.697580009593	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCTCCAGGCTCAGC	3466	False	NA	9	True	AATAAA	-13	NA	8919235	8929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924121_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927028_8927518_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.5	chr19	+	1402	6	NNC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.5572749659011	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGGGCTTCATGGTTTC	4752	False	NA	15	True	AATAAA	-12	NA	8897777	8904596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8898013_8899169_8899345_8902901_8903087_8903243_8903263_8903445_8903737_8904099
ES.17370.50	chr19	+	3080	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-3	-64	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	220.607512883139	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCAGATTCTGTAATTG	3466	False	NA	20	True	AATAAA	-20	NA	8919235	8929603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924121_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.51	chr19	+	3969	15	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	728	junction_3	60.1350945109155	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3468	False	NA	11	True	AATAAA	-15	NA	8919237	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8928395_8928499
ES.17370.52	chr19	+	6919	15	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_6	233.934198405606	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3468	False	NA	16	True	AATAAA	-20	NA	8919237	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8920897_8921376_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924679_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.53	chr19	+	2543	14	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	250.211768296543	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3469	False	NA	11	True	AATAAA	-15	NA	8919238	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924669_8926389_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.54	chr19	+	2912	17	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	228.407120072908	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3469	False	NA	12	True	AATAAA	-16	NA	8919238	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925775_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.56	chr19	+	3088	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	219.276555090727	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCCAGGCTCAGCTATT	3470	False	NA	13	True	AATAAA	-17	NA	8919239	8929660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923669_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.57	chr19	+	3756	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	222.102551206858	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGGCTCAGCTATTC	3470	False	NA	14	True	AATAAA	-18	NA	8919239	8929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927143_8927634_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.58	chr19	+	3393	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	1	-4	intron_retention	FALSE	canonical	3	728	junction_3	73.4630008916053	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3470	False	NA	16	True	AATAAA	-20	NA	8919239	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.59	chr19	+	3196	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	220.15771320833	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3470	False	NA	16	True	AATAAA	-20	NA	8919239	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921537_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.6	chr19	+	6394	27	Fusion	ENSMUSG00000071649.7_ENSMUSG00000071647.6	novel	3322	22	NA	NA	24	-19	intron_retention	FALSE	canonical	0	0	junction_5	55.3218260532841	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	4757	False	NA	-13	True	NA	NA	NA	8897782	8918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099_8904193_8904579_8904648_8905888_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17370.60	chr19	+	4206	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	3	-8	intron_retention	FALSE	canonical	3	728	junction_2	75.0955381081326	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3472	False	NA	12	True	AATAAA	-16	NA	8919241	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.61	chr19	+	3694	15	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	11	-3	intron_retention	FALSE	canonical	3	728	junction_3	78.5169941308692	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTCAGCTATTCTGT	3480	False	NA	17	True	AATAAA	-21	NA	8919249	8929664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275
ES.17370.62	chr19	+	3518	15	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	11	-6	intron_retention	FALSE	canonical	1	1	junction_14	243.144630260448	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGGCTCAGCTATTC	3480	False	NA	14	True	AATAAA	-18	NA	8919249	8929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928853
ES.17370.63	chr19	+	3203	16	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	11	-58	intron_retention	FALSE	canonical	1	1	junction_15	234.901057185077	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGTAATTGGTTCTT	3480	False	NA	26	True	AATAAA	-26	NA	8919249	8929609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928853
ES.17370.64	chr19	+	3595	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	11	-9	intron_retention	FALSE	canonical	3	728	junction_2	74.5024118737105	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3480	False	NA	11	True	AATAAA	-15	NA	8919249	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.66	chr19	+	4233	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	22	0	intron_retention	FALSE	canonical	3	728	junction_3	74.8924228477087	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3491	False	NA	20	True	AATAAA	-24	NA	8919260	8929667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.67	chr19	+	3053	19	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	28	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	215.917651197778	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3497	False	NA	11	True	AATAAA	-15	NA	8919266	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853_8929319_8929363
ES.17370.69	chr19	+	3301	17	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	28	-9	intron_retention	FALSE	canonical	1	3	junction_7	227.604500381144	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3497	False	NA	11	True	AATAAA	-15	NA	8919266	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924402_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499
ES.17370.7	chr19	+	2504	2	FSM	ENSMUSG00000071649.7	ENSMUST00000235193.2	1414	2	151	-1241	62	1241	multi-exon	FALSE	canonical	3	192	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATATTTATCTATTTT	4884	False	NA	NA	False	AATAAA	-16	NA	8897909	8901570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8898013_8899169
ES.17370.70	chr19	+	2772	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	220.01498847967	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTCAGCTATTCTGT	3501	False	NA	17	True	AATAAA	-21	NA	8919270	8929664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919419_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.71	chr19	+	3822	16	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	32	-11	intron_retention	FALSE	canonical	0	0	junction_6	314.219130897885	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCCTCCAGGCTCAGC	3501	False	NA	9	True	AATAAA	-13	NA	8919270	8929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927143_8927634_8927754_8928275_8928395_8928499
ES.17370.73	chr19	+	3013	19	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	42	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	215.917651197778	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGGCTCAGCTATTC	3511	False	NA	14	True	AATAAA	-18	NA	8919280	8929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853_8929490_8929563
ES.17370.75	chr19	+	3058	18	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	100	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	221.687129511398	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCCAGGCTCAGCTAT	3569	False	NA	12	True	AATAAA	-16	NA	8919338	8929659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928468_8928649_8928853
ES.17370.76	chr19	+	2901	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	309	-9	intron_retention	FALSE	canonical	3	728	junction_3	74.7069012458019	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	3778	False	NA	11	True	AATAAA	-15	NA	8919547	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.77	chr19	+	3459	17	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	3	-6	intron_retention	FALSE	canonical	0	0	junction_13	228.755524181931	790	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGGCTCAGCTATTC	4090	False	NA	14	True	AATAAA	-18	NA	8919859	8929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926413_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.78	chr19	+	3837	16	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	3	-9	intron_retention	FALSE	canonical	3	728	junction_2	75.6984074395815	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	4103	False	NA	11	True	AATAAA	-15	NA	8919872	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.79	chr19	+	2769	18	NIC	ENSMUSG00000071646.10	novel	756	7	NA	NA	8	-64	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	219.349052700063	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCAGATTCTGTAATTG	4108	False	NA	20	True	AATAAA	-20	NA	8919877	8929603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8920084_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ES.17370.8	chr19	+	1089	1	NIC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	5663	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTTCATGGTTTCCTT	5402	False	NA	18	True	AATAAA	-15	NA	8903510	8904599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8903500_8904600
ES.17370.81	chr19	+	3730	7	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	548	-9	intron_retention	FALSE	canonical	0	0	junction_4	336.262009285749	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	2181	False	NA	11	True	AATAAA	-15	NA	8924311	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8924964_8925090_8925487_8925620_8925761_8926314_8927143_8927634_8928395_8928499_8928649_8928853
ES.17370.82	chr19	+	4171	4	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	804	-9	intron_retention	FALSE	canonical	3	819	junction_1	36.2491379207837	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCCAGGCTCAGCTA	2437	False	NA	11	True	AATAAA	-15	NA	8924567	8929658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8924964_8925090_8925150_8925388_8925761_8926314
ES.17370.84	chr19	+	2997	3	NNC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	1857	-4	intron_retention	FALSE	canonical	0	0	junction_2	450	790	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTCAGCTATTCTG	3490	False	NA	16	True	AATAAA	-20	NA	8925620	8929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8925761_8926314_8927143_8927634
ES.17370.9	chr19	+	4679	19	NNC	ENSMUSG00000071647.6	novel	3322	22	NA	NA	-141	-3	intron_retention	FALSE	canonical	3	3	junction_3	17.9226734116934	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGCCTGGTGCTTTTGT	1774	False	NA	3	True	AATAAA	-11	NA	8906774	8918943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8908335_8908407_8908669_8908753_8908872_8910605_8910674_8910786_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ES.17371.1	chr19	-	1678	3	FSM	ENSMUSG00000071648.5	ENSMUST00000096242.5	1517	3	-164	3	-164	-3	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCACTGTTCTCCCGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	8906884	8904757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_8905252_8905341_8905589_8905947
ES.17372.1	chr19	-	2829	2	ISM	ENSMUSG00000114220.2	ENSMUST00000225181.2	642	3	828	-913	828	913	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTTTTGGTTTGTTTC	4447	False	NA	NA	False	NA	NA	NA	8917400	8913425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_8914664_8915809
ES.17372.2	chr19	-	1040	1	Intergenic	novelGene_14419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGATCCCCATCTCCC	3909	False	NA	NA	False	NA	NA	NA	8917938	8916898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8916900_8917900
ES.17373.1	chr19	+	2822	9	NNC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-125	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	67.4470857413424	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGTTCTTTTGCATA	1232	False	NA	10	True	AATAAA	-25	NA	8931085	8943573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8931386_8932564_8932701_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17373.10	chr19	+	2649	7	ISM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	4971	7	4888	-7	3prime_fragment	FALSE	canonical	3	129	junction_5	18.0923556601492	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACATTTAATGTTCTTT	3713	False	NA	4	True	AATAAA	-19	NA	8936181	8943567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17373.11	chr19	+	5480	12	Fusion	ENSMUSG00000071644.11_ENSMUSG00000071645.7	novel	1864	10	NA	NA	-1480	-292	intron_retention	FALSE	canonical	3	129	junction_3	4334.77943999328	2357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	170	False	NA	18	True	ATTAAA	-23	NA	8939727	8955551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397_8945739_8946525_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.12	chr19	+	3853	9	Fusion	ENSMUSG00000071644.11_ENSMUSG00000071645.7	novel	1864	10	NA	NA	-1297	-298	intron_retention	FALSE	canonical	3	8704	junction_3	383.621700865579	2351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCCTGTCCTGCCTC	576	False	NA	12	True	ATTAAA	-17	NA	8943107	8955545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.13	chr19	+	1751	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	-167	280	-167	-280	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTGATTGGTGGCTT	676	False	NA	30	True	ATTAAA	-35	NA	8944237	8955563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.14	chr19	+	2113	6	NIC	ENSMUSG00000071644.11	novel	803	6	NA	NA	-80	-662	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	3434.22262528218	2147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAATAGATGAA	763	False	NA	NA	False	NA	NA	NA	8944324	8949286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8947948
ES.17373.17	chr19	+	510	4	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	25	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4568.5852174266	2234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	868	False	NA	11	True	ATTAAA	-16	NA	8944429	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944484_8954760_8954855_8954948_8955074_8955307
ES.17373.18	chr19	+	8709	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	32	-6877	32	6877	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTGCTGAATGCCTGCC	875	False	NA	NA	False	NA	NA	NA	8944436	8962720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.19	chr19	+	1446	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	88	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2877.68455447461	2234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTTTTTCCTGTCCTGC	931	False	NA	9	True	ATTAAA	-14	NA	8944492	8955542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945608_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.20	chr19	+	5667	9	NIC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	109	-297	intron_retention	FALSE	canonical	3	5201	junction_1	1346.70648597792	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	952	False	NA	13	True	ATTAAA	-18	NA	8944513	8955546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8954855_8954948_8955074_8955307
ES.17373.21	chr19	+	1452	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	112	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3000.53417877962	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	955	False	NA	11	True	ATTAAA	-16	NA	8944516	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946862_8947199_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.22	chr19	+	5926	8	NIC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	117	-297	intron_retention	FALSE	canonical	3	5201	junction_1	1433.16360488513	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	960	False	NA	13	True	ATTAAA	-18	NA	8944521	8955546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8954855_8954948_8955074_8955307
ES.17373.24	chr19	+	1725	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	122	17	122	-17	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTCACAGTGTGCAGAG	965	False	NA	NA	False	AAGAAA	-20	NA	8944526	8955826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.26	chr19	+	1404	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	151	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2992.1108037184	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	994	False	NA	11	True	ATTAAA	-16	NA	8944555	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950454_8954672_8954855_8954948_8955074_8955307
ES.17373.27	chr19	+	1401	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	151	-301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2956.59243716583	2234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTTTTTCCTGTCCTGC	994	False	NA	9	True	ATTAAA	-14	NA	8944555	8955542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955063_8955307
ES.17373.3	chr19	+	5269	18	Fusion	ENSMUSG00000071644.11_ENSMUSG00000071645.7	novel	1864	10	NA	NA	-121	-294	multi-exon	FALSE	canonical	0	0	junction_14	4330.94375707993	2357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCCTGCCTCCTTT	1236	False	NA	16	True	ATTAAA	-21	NA	8931089	8955549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950272_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.30	chr19	+	1411	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	152	-299	at_least_one_novel_splicesite	FALSE	canonical	1	32	junction_5	2969.12849166216	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	995	False	NA	11	True	ATTAAA	-16	NA	8944556	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947357_8949877_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.31	chr19	+	1506	9	NIC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	153	-299	intron_retention	FALSE	canonical	3	5201	junction_1	1271.1759749834	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	996	False	NA	11	True	ATTAAA	-16	NA	8944557	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8955074_8955307
ES.17373.33	chr19	+	3340	10	NIC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	154	-292	intron_retention	FALSE	canonical	0	0	junction_5	2978.23859618441	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	997	False	NA	18	True	ATTAAA	-23	NA	8944558	8955551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8947948_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.36	chr19	+	1397	10	NNC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	164	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3000.53417877962	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	1007	False	NA	11	True	ATTAAA	-16	NA	8944568	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946852_8947192_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.37	chr19	+	1665	10	NNC	ENSMUSG00000071644.11	novel	803	6	NA	NA	197	-299	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	2860.84936019504	2234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	1040	False	NA	11	True	ATTAAA	-16	NA	8944601	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944887_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.38	chr19	+	1492	10	NNC	ENSMUSG00000071644.11	novel	803	6	NA	NA	197	-299	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2875.81389875056	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	1040	False	NA	11	True	ATTAAA	-16	NA	8944601	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8944714_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.39	chr19	+	1223	8	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2119	299	944	-299	3prime_fragment	FALSE	canonical	3	8704	junction_2	394.754483243467	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	2962	False	NA	11	True	ATTAAA	-16	NA	8946523	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.4	chr19	+	2820	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	-68	1	-68	-1	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGTTCTTTTGCATA	1289	False	NA	10	True	AATAAA	-25	NA	8931142	8943573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17373.40	chr19	+	3073	5	FSM	ENSMUSG00000071644.11	ENSMUST00000135025.2	1272	5	-2101	300	2087	-300	multi-exon	FALSE	canonical	3	8905	junction_2	398.043025312591	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTTTCCTGTCCTGCC	4105	False	NA	10	True	ATTAAA	-15	NA	8947666	8955543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.41	chr19	+	7311	2	NIC	ENSMUSG00000071644.11	novel	1272	5	NA	NA	-1768	-299	intron_retention	FALSE	canonical	3	9508	junction_1	0	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	4438	False	NA	11	True	ATTAAA	-16	NA	8947999	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8955074_8955307
ES.17373.42	chr19	+	5948	3	NIC	ENSMUSG00000071644.11	novel	1272	5	NA	NA	-497	-297	intron_retention	FALSE	canonical	3	9508	junction_2	178.5	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTGTCCTGCCTCC	5709	False	NA	13	True	ATTAAA	-18	NA	8949270	8955546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8954855_8954948_8955074_8955307
ES.17373.43	chr19	+	977	4	ISM	ENSMUSG00000071644.11	ENSMUST00000135025.2	1272	5	263	299	263	-299	3prime_fragment	FALSE	canonical	3	8905	junction_1	396.184300547106	2233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	6469	False	NA	11	True	ATTAAA	-16	NA	8950030	8955544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8950473_8954681_8954855_8954948_8955074_8955307
ES.17373.44	chr19	+	2465	3	ISM	ENSMUSG00000071644.11	ENSMUST00000135025.2	1272	5	3281	2	3281	-2	3prime_fragment	FALSE	canonical	3	9508	junction_2	178.5	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTGTTTTCTGTCATA	971	False	NA	NA	False	AAGAAA	-35	NA	8953048	8955841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8954855_8954948_8955074_8955307
ES.17373.5	chr19	+	2576	8	NIC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-19	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	56.4320071286803	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTAATGTTCTTTTG	1338	False	NA	6	True	AATAAA	-21	NA	8931191	8943569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8931386_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17373.6	chr19	+	1828	7	NNC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.0483322797496	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGACATTTAATGTTCT	1343	False	NA	2	True	AATAAA	-17	NA	8931196	8943565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8931386_8932750_8932811_8940089_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17373.7	chr19	+	1850	4	NIC	ENSMUSG00000071645.7	novel	1858	5	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.2353614451286	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTGTGTCCGCATCT	1345	False	NA	NA	False	AATAAA	-22	NA	8931198	8940863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8931386_8932750_8932942_8936450_8936767_8939707
ES.17373.8	chr19	+	1943	5	FSM	ENSMUSG00000071645.7	ENSMUST00000236564.2	1858	5	-95	10	-12	-10	multi-exon	FALSE	canonical	3	135	junction_1	17.1955662890176	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTCTTATATTTGTGT	1345	False	NA	NA	False	AATAAA	-14	NA	8931198	8940855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707
ES.17373.9	chr19	+	2278	8	NIC	ENSMUSG00000071645.7	novel	2753	9	NA	NA	-12	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	55.7615184403681	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGACATTTAATGTTCTT	1345	False	NA	3	True	AATAAA	-18	NA	8931198	8943566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ES.17374.1	chr19	-	681	3	Antisense	novelGene_ENSMUSG00000071645.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAAAACAACAACAACA	2500	False	NA	NA	False	NA	NA	NA	8939888	8936368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8936764_8937102_8937206_8939705
ES.17374.2	chr19	-	3096	3	Antisense	novelGene_ENSMUSG00000071645.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAAAACAACAACAACA	2500	False	NA	NA	False	NA	NA	NA	8939888	8936368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8936764_8937102_8939621_8939705
ES.17375.1	chr19	-	1027	1	Antisense	novelGene_ENSMUSG00000071644.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGTTGGGGGCAGCT	NA	False	NA	NA	False	NA	NA	NA	8948931	8947904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_8947900_8948900
ES.17376.1	chr19	-	158	1	Intergenic	novelGene_14420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCATGGGTTC	NA	False	NA	NA	False	NA	NA	NA	8953442	8953284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8953300_8953400
ES.17377.1	chr19	-	6669	1	Intergenic	novelGene_14421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAAACCACTTTGT	3003	False	NA	NA	False	NA	NA	NA	8963838	8957169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_8957200_8963800
ES.17378.1	chr19	+	1083	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-33	-220	-22	20	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGGTTTTGCGTACTT	NA	False	NA	33	True	AATAAA	-34	NA	8966625	9054298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ES.17378.10	chr19	+	18097	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	3	0	3	0	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGTGCTCTTGTATTC	NA	False	NA	6	True	AATAAA	-19	NA	8966650	8996560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
ES.17378.11	chr19	+	724	4	NNC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	492	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.3099918276117	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTGTTCTGTGATCA	6953	False	NA	11	True	AATAAA	-12	NA	8977515	9054276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8977621_8978039_8978228_9014522_9014617_9053939
ES.17378.12	chr19	+	6422	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	19910	3581	9534	-3581	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAAACCCAAGTTTGG	1698	False	NA	NA	False	NA	NA	NA	8986557	8992979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8986600_8993000
ES.17378.13	chr19	+	5622	2	NNC	ENSMUSG00000069833.14	novel	18100	5	NA	NA	12388	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTATCGTGCTCTTGTAT	64	False	NA	4	True	AATAAA	-17	NA	8989411	8996558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8989446_8990970
ES.17378.14	chr19	+	5635	2	NNC	ENSMUSG00000069833.14	novel	18100	5	NA	NA	13140	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGTGCTCTTGTATTC	816	False	NA	6	True	AATAAA	-19	NA	8990163	8996560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8990244_8991005
ES.17378.15	chr19	+	1265	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	25256	3392	14880	-3392	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGGGATTTGATTT	1252	False	NA	NA	False	TTTAAA	-40	NA	8991903	8993168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8991900_8993200
ES.17378.2	chr19	+	1980	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	-10	-1140	1	940	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATTGTTATCTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8966648	9055218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ES.17378.3	chr19	+	1932	7	NNC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	2	939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.7533781727558	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGAATTGTTATCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	8966649	9055217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939_9054625_9054670
ES.17378.4	chr19	+	2067	7	NIC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	2	936	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	26.9222130508537	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATGGAATTGTTATCT	NA	False	NA	NA	False	AATAAA	-15	NA	8966649	9055214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
ES.17378.5	chr19	+	5626	8	NNC	ENSMUSG00000069833.14	novel	989	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.801194602437	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCTGTGATCACC	NA	False	NA	13	True	AATAAA	-14	NA	8966649	9054278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9023999_9028495_9053939
ES.17378.6	chr19	+	571	4	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	2	18362	2	-1452	5prime_fragment	FALSE	canonical	3	61	junction_1	8.80656320908194	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCCCGTAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	8966649	8978198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039
ES.17378.7	chr19	+	1196	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	2	16902	2	8	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGGTGTCTCCGCAG	NA	False	NA	NA	False	ATTAAA	-21	NA	8966649	8979658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
ES.17378.8	chr19	+	2059	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	3	16038	3	872	multi-exon	FALSE	canonical	3	15	junction_4	26.3853652618265	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAAGGTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	8966650	8980522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
ES.17378.9	chr19	+	1129	7	NIC	ENSMUSG00000069833.14	novel	1188	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	26.9222130508537	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGTTCTGTGATCAC	NA	False	NA	12	True	AATAAA	-13	NA	8966650	9054277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
ES.17379.1	chr19	-	4169	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	21	5	21	-5	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGACTTGCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	9112979	9087236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.17379.11	chr19	-	1125	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	11	3059	11	-3059	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTCTGTCCCTCCTTTTG	NA	False	NA	2	True	NA	NA	NA	9112989	9090290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.17379.12	chr19	-	1040	7	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	-52	-3062	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	152.800159976647	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCAGTCTGTCCCTCCTT	NA	False	NA	-1	True	NA	NA	NA	9112947	9090293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9091587_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.17379.13	chr19	-	1754	4	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	16209	-3063	intron_retention	FALSE	canonical	0	0	junction_1	194.038369630568	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGCAGTCTGTCCCTCCT	NA	False	NA	-2	True	NA	NA	NA	9096686	9090294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9091025_9091547_9091659_9093865_9093985_9095892
ES.17379.14	chr19	-	1237	8	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	37	-3069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	195.499151832807	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTACGCAGTCTGTC	NA	False	NA	-8	True	NA	NA	NA	9112963	9090300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9090876_9091025_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.17379.15	chr19	-	5061	1	Intergenic	novelGene_14422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9103863	9098802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_9098800_9103900
ES.17379.16	chr19	-	3726	3	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	47	9560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.5	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAAAACTTAAGA	NA	False	NA	NA	False	NA	NA	NA	9112953	9100262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9103713_9112150_9112352_9112878
ES.17379.3	chr19	-	4397	7	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	-42	-62	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	161.091502638166	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	9112937	9087293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112551
ES.17379.4	chr19	-	2277	7	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	-29	-2169	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	161.091502638166	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9112924	9089400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112551
ES.17379.5	chr19	-	2016	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	10	2169	10	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9112990	9089400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.17379.7	chr19	-	2074	8	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	29	-2177	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	184.03083148966	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGAGTGTGGTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	9112971	9089408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9098371_9098457_9112150_9112352_9112878
ES.17379.8	chr19	-	1937	7	NNC	ENSMUSG00000024654.9	novel	4195	7	NA	NA	41	-2177	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	152.800159976647	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGAGTGTGGTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	9112959	9089408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9090573_9091587_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ES.1738.1	chr1	+	6670	5	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161271182	161303334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161271206_161292537_161292768_161295048_161297224_161298187_161298317_161299221
ES.17380.1	chr19	+	3565	1	Intergenic	novelGene_14423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGAACTTATGACTT	NA	False	NA	NA	False	NA	NA	NA	9115454	9119019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_9115500_9119000
ES.17381.1	chr19	-	157	1	Intergenic	novelGene_14424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	9189638	9189481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_9189500_9189600
ES.17382.1	chr19	+	1258	1	FSM	ENSMUSG00000067608.6	ENSMUST00000088040.6	781	1	-142	-335	-142	335	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATC	NA	False	NA	NA	False	AATAAA	-21	NA	9260601	9261859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9260600_9261900
ES.17382.2	chr19	+	1062	1	FSM	ENSMUSG00000067608.6	ENSMUST00000088040.6	781	1	-140	-141	-140	141	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACCTACTTTCTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	9260603	9261665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9260600_9261700
ES.17383.1	chr19	+	188	1	Intergenic	novelGene_14425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACCAGGTAACCAGTTT	NA	False	NA	NA	False	NA	NA	NA	9444577	9444765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_9444600_9444800
ES.17384.1	chr19	+	245	1	Antisense	novelGene_ENSMUSG00000118138.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTAATTCCAGATGTATG	NA	False	NA	NA	False	NA	NA	NA	9843259	9843504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_9843300_9843500
ES.17385.1	chr19	+	3644	1	Antisense	novelGene_ENSMUSG00000024660.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCTTGCAAACACGTCT	NA	False	NA	NA	False	NA	NA	NA	9857820	9861464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_9857800_9861500
ES.17386.1	chr19	+	3735	1	Intergenic	novelGene_14426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCAAACCACAACAACAA	3451	False	NA	NA	False	NA	NA	NA	9864778	9868513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_9864800_9868500
ES.17387.1	chr19	+	572	2	FSM	ENSMUSG00000118100.2	ENSMUST00000235252.2	330	2	-243	1	-2	-1	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGCTCATGG	NA	False	NA	NA	False	NA	NA	NA	9877055	9878474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9877385_9878231
ES.17388.1	chr19	-	11169	18	FSM	ENSMUSG00000118138.2_ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	77	-8010	-13	638	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGCTCCTGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	9876838	9841649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.10	chr19	-	6563	11	NIC	ENSMUSG00000024660.10	novel	2643	18	NA	NA	1019	-8	intron_retention	FALSE	canonical	0	0	junction_8	143.801808055393	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGGTCTGCAGCAGT	NA	False	NA	-11	True	NA	NA	NA	9861853	9849667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9860568_9861062_9861198_9861268_9861384_9861801
ES.17388.11	chr19	-	4741	6	NNC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	-10987	-11	intron_retention	TRUE	canonical	0	0	junction_5	193.750974191099	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATATTGGTCTGCAGC	8051	False	NA	-14	True	NA	NA	NA	9887902	9849670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9852288_9852461_9852541_9853953_9855613_9855682_9857380_9887867
ES.17388.13	chr19	-	3183	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	31	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	113.37551287829	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGGATATTGTGAAGA	NA	False	NA	37	True	AATAAA	-18	NA	9876884	9849702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.14	chr19	-	3743	7	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	14807	-335	-2014	0	intron_retention	FALSE	canonical	3	443	junction_5	38.2143079661706	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9858017	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491
ES.17388.15	chr19	-	2937	16	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	99	0	intron_retention	FALSE	canonical	3	363	junction_13	48.6860235477174	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9872725	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684
ES.17388.16	chr19	-	8367	17	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_5	116.598670661376	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876831	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854172_9855040_9855161_9855491_9855613_9855682_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.17	chr19	-	7098	6	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	11783	-335	1831	0	intron_retention	FALSE	canonical	3	443	junction_5	37.9652472664146	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9861041	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040
ES.17388.18	chr19	-	3457	17	FSM	ENSMUSG00000024660.10	ENSMUST00000238129.2	3449	17	-26	18	2	0	multi-exon	FALSE	canonical	3	363	junction_13	49.1273854382665	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876851	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.19	chr19	-	3181	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	111.78959475197	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876710	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876506
ES.17388.2	chr19	-	8174	3	ISM	ENSMUSG00000118138.2_ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	20576	-7757	39	4	3prime_fragment	FALSE	canonical	3	513	junction_2	14	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAGAATGGTCTTTAC	NA	False	NA	0	True	NA	NA	NA	9852248	9842283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_9850238_9851583_9851735_9852179
ES.17388.20	chr19	-	3041	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.065434097001	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876849	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9854036_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.21	chr19	-	3102	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	113.367455342333	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876838	9849705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864049_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.22	chr19	-	3154	17	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	34	-3	intron_retention	FALSE	canonical	0	0	junction_7	116.858822409778	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTGTGGATATTG	NA	False	NA	31	True	AATAAA	-12	NA	9876791	9849708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.23	chr19	-	2191	5	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	311	-3	intron_retention	FALSE	canonical	3	443	junction_4	39.7146068846212	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTGTGGATATTG	NA	False	NA	31	True	AATAAA	-12	NA	9855692	9849708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9852288_9852461_9852541_9853953_9854181_9855040
ES.17388.25	chr19	-	3211	19	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	167.9831800075	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTGTGGATATTG	NA	False	NA	31	True	AATAAA	-12	NA	9876851	9849708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9872938_9873006_9876702
ES.17388.26	chr19	-	4432	6	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-1848	-5	intron_retention	FALSE	canonical	3	443	junction_5	37.9652472664146	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTCTGCTGTGGATAT	NA	False	NA	29	True	AATAAA	-10	NA	9857851	9849710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9855161_9855491
ES.17388.27	chr19	-	3009	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	36	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	111.78959475197	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATGACTTTTAGTTTCT	NA	False	NA	-25	True	AATAAA	-19	NA	9876709	9849764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876618
ES.17388.28	chr19	-	3122	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	8	106	8	-60	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876907	9849765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.29	chr19	-	3164	19	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-29	-60	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	143.262956451966	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876882	9849765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9872938_9873006_9876702
ES.17388.3	chr19	-	6140	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	189	-3093	19	3093	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCAATATGGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	9876726	9846566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.30	chr19	-	3465	16	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	4	-60	intron_retention	FALSE	canonical	3	363	junction_12	50.4849372475483	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876849	9849765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.31	chr19	-	3084	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-6	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.476767447849	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876831	9849765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850255_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.32	chr19	-	2963	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.305111410809	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876853	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876827
ES.17388.33	chr19	-	1887	12	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-80	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	133.35858576295	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9862953	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851816_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836
ES.17388.34	chr19	-	3039	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-6	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	113.268520717219	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876831	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862842_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.36	chr19	-	3134	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	4	-61	intron_retention	FALSE	canonical	3	363	junction_13	49.1424905250029	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876849	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.37	chr19	-	3072	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-15	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	113.367455342333	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876868	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863119_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.38	chr19	-	893	5	NNC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	-1757	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	219.240735266054	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9854044	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852468_9852541_9853953
ES.17388.39	chr19	-	4221	16	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	9	-61	intron_retention	FALSE	canonical	3	363	junction_12	50.7041966266655	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876816	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.4	chr19	-	2958	5	ISM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	18801	-2353	-1736	1972	3prime_fragment	FALSE	canonical	3	446	junction_4	34.9070193514141	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTTTCTCTGTTTTT	NA	False	NA	NA	False	GATAAA	-27	NA	9854023	9847687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953
ES.17388.40	chr19	-	3065	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	4	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	111.78959475197	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876849	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872832_9876696
ES.17388.41	chr19	-	6536	6	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	3122	-61	intron_retention	FALSE	canonical	3	417	junction_5	44.7079411290657	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9859750	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9855613_9855682
ES.17388.42	chr19	-	6911	7	ISM	ENSMUSG00000024660.10	ENSMUST00000238129.2	3449	17	15840	79	1887	-61	3prime_fragment	FALSE	canonical	3	417	junction_6	43.1997942381931	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9860985	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855613_9855682
ES.17388.44	chr19	-	3047	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	18	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	113.118855335996	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876807	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855187_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.45	chr19	-	4717	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	35	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	111.78959475197	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876710	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9874909
ES.17388.46	chr19	-	3076	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	1	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.313897523635	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAATGACTTTTAGTTT	NA	False	NA	-27	True	AATAAA	-17	NA	9876852	9849766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854178_9855040_9855161_9855491_9855613_9855688_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872315_9872684_9872836_9876702
ES.17388.48	chr19	-	3074	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	4	-62	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	113.37551287829	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGAATGACTTTTAGTT	NA	False	NA	-28	True	AATAAA	-16	NA	9876849	9849767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855805_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.49	chr19	-	2807	17	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	87	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	114.910223109173	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAATGACTTTTAGT	NA	False	NA	-29	True	AATAAA	-15	NA	9872737	9849768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861164_9861243_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684
ES.17388.5	chr19	-	3241	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	-10	5	-10	-5	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCTGCAGCAGTATG	NA	False	NA	-8	True	NA	NA	NA	9876925	9849664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.50	chr19	-	3489	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-6	-63	intron_retention	FALSE	canonical	3	363	junction_13	47.6795537285113	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAATGACTTTTAGT	NA	False	NA	-29	True	AATAAA	-15	NA	9876859	9849768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.51	chr19	-	3038	18	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	17	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.065434097001	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAATGACTTTTAGT	NA	False	NA	-29	True	AATAAA	-15	NA	9876808	9849768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852559_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.52	chr19	-	3888	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	9	-63	intron_retention	FALSE	canonical	3	363	junction_13	49.1273854382665	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAATGACTTTTAGT	NA	False	NA	-29	True	AATAAA	-15	NA	9876816	9849768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.53	chr19	-	3205	19	NNC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	36	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	167.9831800075	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGAATGACTTTTAGT	NA	False	NA	-29	True	AATAAA	-15	NA	9876709	9849768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855814_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9872938_9873006_9876506
ES.17388.54	chr19	-	2855	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	56	325	-6	56	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTGTCTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	9876859	9849984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.6	chr19	-	2728	6	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	453	-7	intron_retention	FALSE	canonical	3	443	junction_4	38.6139871031211	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGTCTGCAGCAGTA	NA	False	NA	-10	True	NA	NA	NA	9855550	9849666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9854181_9855040_9855161_9855491
ES.17388.7	chr19	-	3037	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	-6	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	111.989885145936	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGTCTGCAGCAGTA	NA	False	NA	-10	True	NA	NA	NA	9876831	9849666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.8	chr19	-	2924	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	15	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	116.296344928592	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGTCTGCAGCAGTA	NA	False	NA	-10	True	NA	NA	NA	9876730	9849666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17388.9	chr19	-	4423	15	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	4	-8	intron_retention	FALSE	canonical	3	363	junction_11	52.2327991411761	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGGTCTGCAGCAGT	NA	False	NA	-11	True	NA	NA	NA	9876849	9849667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ES.17389.1	chr19	+	161	1	Intergenic	novelGene_14427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAACAAACAAGT	NA	False	NA	NA	False	NA	NA	NA	9889819	9889980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_9889800_9890000
ES.1739.1	chr1	-	169	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGGAAAGAAAGCATG	NA	False	NA	NA	False	NA	NA	NA	161327700	161327531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161327500_161327700
ES.17390.1	chr19	-	104	1	Intergenic	novelGene_14428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAACTTT	8305	False	NA	NA	False	NA	NA	NA	9946734	9946630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_9946600_9946700
ES.17391.1	chr19	-	4768	1	Intergenic	novelGene_14429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAAATTAAA	2773	False	NA	NA	False	NA	NA	NA	9952266	9947498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_9947500_9952300
ES.17392.1	chr19	-	2355	1	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAAAACAAAACAAAACA	4808	False	NA	NA	False	NA	NA	NA	9959826	9957471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_9957500_9959800
ES.17393.1	chr19	+	976	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	-30	-17	-30	17	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGCATTCCAGCTTCCA	4839	False	NA	40	True	AATAAA	-38	NA	9959979	9962479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ES.17393.2	chr19	+	937	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2724.49448929929	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTTTTCTTTGTGAT	4847	False	NA	16	True	AATAAA	-14	NA	9959987	9962455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_9960348_9961544_9961692_9961930_9962050_9962144
ES.17393.3	chr19	+	2389	1	NIC	ENSMUSG00000024661.8	novel	1494	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	4927	False	NA	17	True	AATAAA	-15	NA	9960067	9962456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_9960100_9962500
ES.17393.4	chr19	+	2062	3	FSM	ENSMUSG00000024661.8	ENSMUST00000237316.2	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	5325	junction_1	204.5	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	4927	False	NA	17	True	AATAAA	-15	NA	9960067	9962456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9961692_9961923_9962050_9962144
ES.17393.5	chr19	+	695	3	NNC	ENSMUSG00000024661.8	novel	2062	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2867	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	4927	False	NA	17	True	AATAAA	-15	NA	9960067	9962456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_9960325_9961923_9962050_9962144
ES.17393.6	chr19	+	958	3	FSM	ENSMUSG00000024661.8	ENSMUST00000237465.2	592	3	-17	-349	2	0	multi-exon	FALSE	canonical	3	5325	junction_2	249.5	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	4929	False	NA	17	True	AATAAA	-15	NA	9960069	9962456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9960348_9961544_9961692_9961923
ES.17394.1	chr19	-	1996	8	NIC	ENSMUSG00000037418.7	novel	2080	12	NA	NA	-184	-4	intron_retention	TRUE	canonical	1	1	junction_1	0.880630571852711	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGTTTCAGTGTGATTA	8018	False	NA	NA	False	AATAAA	-15	NA	9970463	9962541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_9962787_9963560_9964359_9966485_9966638_9966965_9967047_9967837_9967991_9969000_9969079_9969420_9969576_9970129
ES.17395.1	chr19	+	184	1	Intergenic	novelGene_14430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	4407	False	NA	NA	False	NA	NA	NA	9989512	9989696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_9989500_9989700
ES.17396.1	chr19	+	1998	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	6	0	6	0	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	3974	False	NA	2	True	AATAAA	-17	NA	9995563	10012819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ES.17396.2	chr19	+	2208	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	23	2915	22	1	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCAGTGGCCTTCACT	3990	False	NA	9	True	AATAAA	-24	NA	9995579	10012826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ES.17396.3	chr19	+	2123	9	NIC	ENSMUSG00000024663.21	novel	5146	10	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.2638257000006	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	3990	False	NA	2	True	AATAAA	-17	NA	9995579	10012819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_9995724_10003893_10004150_10004747_10004844_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ES.17396.4	chr19	+	2269	11	NIC	ENSMUSG00000024663.21	novel	5293	11	NA	NA	-18	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.4370295635467	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGGCGGCAGTGGCCTT	4021	False	NA	5	True	AATAAA	-20	NA	9995610	10012822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_9995724_9995845_9995942_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ES.17396.5	chr19	+	2356	11	NNC	ENSMUSG00000024663.21	novel	5293	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.7045191970864	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	4027	False	NA	2	True	AATAAA	-17	NA	9995616	10012819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10006792_10006985_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ES.17396.6	chr19	+	5325	8	NIC	ENSMUSG00000024663.21	novel	5146	10	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	20	junction_4	9.11603207631075	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTAGGCGGCAGTGG	4027	False	NA	1	True	AATAAA	-16	NA	9995616	10012818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10011175_10011820
ES.17397.1	chr19	-	4285	1	Genic_Genomic	ENSMUSG00000024665.9	novel	NA	NA	NA	NA	7420	3282	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCTTGTCTCAGAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	10041131	10036846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_10036800_10041100
ES.17397.10	chr19	-	1859	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	-88	1379	-88	-60	multi-exon	FALSE	canonical	3	359	junction_1	25.8738196920081	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTGCATCCTTTCT	9783	False	NA	0	True	NA	NA	NA	10079198	10041507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ES.17397.11	chr19	-	3666	6	NIC	ENSMUSG00000024665.9	novel	3150	12	NA	NA	-37	-1484	intron_retention	FALSE	canonical	3	383	junction_4	17.7583783043385	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGAAAGTAAGGATGAT	9834	False	NA	NA	False	AATAAA	-14	NA	10079147	10045420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ES.17397.12	chr19	-	2348	6	NIC	ENSMUSG00000024665.9	novel	355	6	NA	NA	-58	-7351	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	159.09670015434	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGGCTCGTGTCAAG	9813	False	NA	NA	False	NA	NA	NA	10079168	10051287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10052517_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ES.17397.2	chr19	-	764	1	Intergenic	novelGene_14431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTATGTTTGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	10040044	10039280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10039300_10040000
ES.17397.3	chr19	-	3601	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	-407	-44	-407	44	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGATGTCACAGGTGT	9464	False	NA	40	True	NA	NA	NA	10079517	10040084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ES.17397.4	chr19	-	3359	4	ISM	ENSMUSG00000024665.9	ENSMUST00000238023.2	879	8	3330	-1316	3330	-3	intron_retention	FALSE	canonical	3	359	junction_1	29.4731516242608	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCCTGTAGTTCAGC	NA	False	NA	-7	True	AATAAA	-22	NA	10045221	10040131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615
ES.17397.6	chr19	-	1989	6	NNC	ENSMUSG00000024665.9	novel	879	8	NA	NA	-58	-31	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	158.484573381765	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAAAAAGTAA	9813	False	NA	-35	True	NA	NA	NA	10079168	10040159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043904_10079026
ES.17397.9	chr19	-	7693	12	NIC	ENSMUSG00000024665.9	novel	3150	12	NA	NA	-46	-31	intron_retention	FALSE	canonical	0	0	junction_7	117.938420688002	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAAAAAGTAA	9825	False	NA	-35	True	NA	NA	NA	10079156	10040159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10052517_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ES.17398.1	chr19	-	176	1	Intergenic	novelGene_14432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	10104899	10104723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10104700_10104900
ES.17399.1	chr19	-	215	1	Intergenic	novelGene_14433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGTTCTAGTT	1775	False	NA	NA	False	NA	NA	NA	10120196	10119981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10120000_10120200
ES.174.1	chr1	-	204	1	Antisense	novelGene_ENSMUSG00000102633.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCTCAGTAGGTAGCAA	NA	False	NA	NA	False	NA	NA	NA	21306601	21306397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_21306400_21306600
ES.1740.1	chr1	-	1694	3	NNC	ENSMUSG00000040323.14	novel	798	3	NA	NA	-195	702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161555253	161553108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161553876_161554208_161554584_161554701
ES.17400.1	chr19	-	174	1	Intergenic	novelGene_14434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10135854	10135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10135700_10135900
ES.17401.1	chr19	+	4014	2	Antisense	novelGene_ENSMUSG00000117700.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACATACCATCTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	10152993	10157843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_10155422_10156257
ES.17402.1	chr19	+	3584	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	-121	-3	-121	0	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	False	NA	21	True	AATAAA	-22	NA	10160130	10174241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.10	chr19	+	3104	10	NIC	ENSMUSG00000010663.6	novel	3301	11	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	257.373245801348	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAATGTTGTTATTCA	NA	False	NA	13	True	AATAAA	-14	NA	10160293	10174233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.11	chr19	+	3674	11	ISM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	42	0	-9	0	intron_retention	FALSE	canonical	3	652	junction_7	53.2879911424704	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160293	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852
ES.17402.13	chr19	+	3490	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	232.232357281657	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160295	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162476_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.14	chr19	+	5031	9	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	744	junction_5	37.8035629934534	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160295	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10171163_10171359_10171457_10171681_10171762_10171852
ES.17402.16	chr19	+	2556	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	45	859	-6	698	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTGGTAAAAGATATGT	NA	False	NA	16	True	AATAAA	-19	NA	10160296	10173379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.17	chr19	+	3472	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	294.841435728125	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160296	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10166983_10167041_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.18	chr19	+	3312	11	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	241.797518597689	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160297	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.19	chr19	+	1583	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	47	1830	-4	-273	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCGCCCCTCCCCCTTG	NA	False	NA	NA	False	TTTAAA	-31	NA	10160298	10172408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.2	chr19	+	3410	11	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	243.622987421138	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160236	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.20	chr19	+	3323	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGAATGTTGTTATTC	NA	False	NA	12	True	AATAAA	-13	NA	10160298	10174232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10172814_10172897
ES.17402.21	chr19	+	5532	10	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	747	junction_1	43.998597059564	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160298	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.22	chr19	+	3283	11	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	234.014550829644	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160298	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10172234
ES.17402.23	chr19	+	3371	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160300	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10172633_10172672
ES.17402.24	chr19	+	1295	6	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	-1953	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	309.920635001931	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATGTCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	10160302	10166896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10166467
ES.17402.25	chr19	+	3187	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160302	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10173196_10173413
ES.17402.26	chr19	+	3045	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160302	10174235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10172647_10173007
ES.17402.28	chr19	+	3403	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	232.791077901223	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160302	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164242_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.29	chr19	+	3181	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160302	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10173672_10173899
ES.17402.30	chr19	+	3403	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.680186905236	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160302	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163747_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.31	chr19	+	3267	10	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	256.350454564753	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTTATTCATT	NA	False	NA	15	True	AATAAA	-16	NA	10160303	10174235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.34	chr19	+	3475	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.621612551664	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGAATGTTGTTATTC	NA	False	NA	12	True	AATAAA	-13	NA	10160303	10174232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10162975_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.35	chr19	+	4889	7	ISM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	52	0	1	0	intron_retention	FALSE	canonical	3	744	junction_6	26.6630205840724	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160303	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275
ES.17402.36	chr19	+	3321	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160303	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10173234_10173316
ES.17402.37	chr19	+	3281	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160303	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10172381_10172507
ES.17402.38	chr19	+	8861	9	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	7	-6	intron_retention	FALSE	canonical	3	744	junction_5	49.5756996924905	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGAATGTTGTTATTC	NA	False	NA	12	True	AATAAA	-13	NA	10160309	10174232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10168865_10170275_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.4	chr19	+	3578	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	294.841435728125	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160252	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10166917_10167041_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.40	chr19	+	3529	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	228.152370428693	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160352	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10172149_10172234
ES.17402.41	chr19	+	3456	12	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	233.621612551664	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160362	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10162941_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.42	chr19	+	3234	11	FSM	ENSMUSG00000010663.6	ENSMUST00000235160.2	3301	11	64	3	18	0	multi-exon	FALSE	canonical	1	1	junction_1	244.492126662598	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160366	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10160629_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.43	chr19	+	3168	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160370	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160418_10160586_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.44	chr19	+	3986	9	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_2	254.091395958226	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160370	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10162975_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359
ES.17402.45	chr19	+	3425	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.680186905236	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160381	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163646_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.46	chr19	+	2816	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-14	-511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	231.993480957141	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCCTTCTTCAGAATA	NA	False	NA	NA	False	ATTAAA	-14	NA	10160388	10173727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163848_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.48	chr19	+	4214	10	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	744	junction_6	46.7533586302618	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160406	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.50	chr19	+	4477	8	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	84	-4	intron_retention	FALSE	canonical	3	744	junction_6	31.1939292890427	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10160486	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10171457_10171681
ES.17402.51	chr19	+	4326	12	NNC	ENSMUSG00000010663.6	novel	742	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	231.70289468403	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160887	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10162131_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.52	chr19	+	4440	11	NNC	ENSMUSG00000010663.6	novel	742	6	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_5	379.318718230461	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160890	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10162131_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10166917_10167041_10168803_10168865_10170275_10170353_10171064_10171163_10171681_10171979_10172234
ES.17402.54	chr19	+	3189	12	NNC	ENSMUSG00000010663.6	novel	422	5	NA	NA	865	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.92790441247	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10161782	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10161889_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.56	chr19	+	4099	6	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-1617	0	intron_retention	FALSE	canonical	3	652	junction_1	82.0989646706948	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10168658	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.57	chr19	+	3441	3	ISM	ENSMUSG00000010663.6	ENSMUST00000235160.2	3301	11	8368	7	-1605	-4	intron_retention	FALSE	canonical	3	652	junction_2	46	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10168670	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10168865_10170275_10170353_10171064
ES.17402.58	chr19	+	2966	2	NIC	ENSMUSG00000010663.6	novel	3301	11	NA	NA	330	-4	intron_retention	FALSE	canonical	3	885	junction_1	0	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTGTTATTCAT	NA	False	NA	14	True	AATAAA	-15	NA	10171012	10174234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10171979_10172234
ES.17402.6	chr19	+	6957	5	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-9	0	intron_retention	FALSE	canonical	3	747	junction_1	27.8601417799695	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160293	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10160629_10162290_10163247_10163741_10163844_10164118_10164248_10168803
ES.17402.7	chr19	+	1799	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	42	1619	-9	-62	multi-exon	FALSE	canonical	3	652	junction_7	60.0436480355873	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCCTTGTTAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	10160293	10172619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17402.8	chr19	+	3257	13	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	224.133702656844	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160293	10174238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234_10172867_10173027
ES.17402.9	chr19	+	3419	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	233.680186905236	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGAATGTTGTTATTCA	NA	False	NA	13	True	AATAAA	-14	NA	10160293	10174233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10160629_10162290_10162402_10163048_10163253_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ES.17403.1	chr19	+	2991	2	NNC	ENSMUSG00000064032.3	novel	3332	2	NA	NA	613	624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTATTCTGTGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	10177165	10180372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10179799_10180014
ES.17403.2	chr19	+	2135	1	FSM	ENSMUSG00000064032.3	ENSMUST00000081739.2	3194	1	1330	-271	1330	269	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTCAATTGTTCTAAT	482	False	NA	NA	False	NA	NA	NA	10177882	10180017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10177900_10180000
ES.17404.1	chr19	-	2575	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	159	-393	-15	387	multi-exon	FALSE	canonical	3	832	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGTGTCCGGGAAGA	2189	False	NA	NA	False	AATAAA	-22	NA	10181273	10176108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181051
ES.17404.10	chr19	-	2212	2	NNC	ENSMUSG00000024742.16	novel	2341	2	NA	NA	-16	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	2188	False	NA	NA	False	AAGAAA	-43	NA	10181274	10176531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10178462_10180992
ES.17404.11	chr19	-	2344	2	NNC	ENSMUSG00000024742.16	novel	2341	2	NA	NA	2	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	2157	False	NA	NA	False	AAGAAA	-43	NA	10181305	10176531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10178462_10180891
ES.17404.12	chr19	-	4659	3	NNC	ENSMUSG00000024742.16	novel	2373	3	NA	NA	-49	-26	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.5	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	1981	False	NA	NA	False	AAGAAA	-43	NA	10181481	10176531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10179802_10180017_10181384_10181458
ES.17404.13	chr19	-	947	3	NNC	ENSMUSG00000024742.16	novel	2100	2	NA	NA	23	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.5	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAGAAAAAAAAAACAATAA	2178	False	NA	NA	False	AAGAAA	-39	NA	10181284	10176535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10177234_10178329_10178462_10181167
ES.17404.14	chr19	-	2240	3	NNC	ENSMUSG00000024742.16	novel	2152	2	NA	NA	22	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAGAAAAAAAAAACAATA	2177	False	NA	NA	False	AAGAAA	-38	NA	10181285	10176536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10178462_10179528_10179621_10181062
ES.17404.15	chr19	-	1443	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	127	771	2	-767	multi-exon	FALSE	canonical	3	832	junction_1	0	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGGCTGTCTATCTGT	2157	False	NA	NA	False	AATAAA	-27	NA	10181305	10177272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181051
ES.17404.16	chr19	-	1305	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	22	773	22	-769	multi-exon	FALSE	canonical	3	443	junction_1	0	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCAGGCTGTCTATCT	2177	False	NA	NA	False	AATAAA	-25	NA	10181285	10177274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181167
ES.17404.2	chr19	-	2298	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	45	-2	45	2	multi-exon	FALSE	canonical	3	832	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTCTGAATGTTTG	2075	False	NA	NA	False	AATAAA	-16	NA	10181387	10176499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181051
ES.17404.3	chr19	-	2185	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	-27	-6	22	2	multi-exon	FALSE	canonical	3	104	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTCTGAATGTTTG	2177	False	NA	NA	False	AATAAA	-16	NA	10181285	10176499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181062
ES.17404.5	chr19	-	2088	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	0	12	0	-8	multi-exon	FALSE	canonical	3	443	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAAGTGACCAGAATG	2155	False	NA	NA	False	AATAAA	-2	NA	10181307	10176513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10178462_10181167
ES.17404.8	chr19	-	1085	3	NNC	ENSMUSG00000024742.16	novel	2373	3	NA	NA	5	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	416	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	2160	False	NA	NA	False	AAGAAA	-43	NA	10181302	10176531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10177234_10178329_10178462_10181051
ES.17404.9	chr19	-	2231	3	NNC	ENSMUSG00000024742.16	novel	2373	3	NA	NA	-14	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	2190	False	NA	NA	False	AAGAAA	-43	NA	10181272	10176531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10178462_10180807_10180888_10181051
ES.17405.1	chr19	+	438	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	166	2	-38	-2	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCATGTCCATTCTTAG	4143	False	NA	31	True	AATAAA	-20	NA	10181543	10185186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ES.17405.2	chr19	+	821	3	ISM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	194	7	-10	-1	intron_retention	FALSE	canonical	3	2797	junction_1	592.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4171	False	NA	26	True	AATAAA	-15	NA	10181571	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10181629_10183787_10183898_10184527
ES.17405.3	chr19	+	1448	2	ISM	ENSMUSG00000036372.15	ENSMUST00000127878.2	1026	3	-7	1	-7	-1	intron_retention	FALSE	canonical	3	2797	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4174	False	NA	26	True	AATAAA	-15	NA	10181574	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10181629_10183787
ES.17405.4	chr19	+	1024	3	FSM	ENSMUSG00000036372.15	ENSMUST00000127878.2	1026	3	1	1	1	-1	multi-exon	FALSE	canonical	3	2797	junction_1	181	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4182	False	NA	26	True	AATAAA	-15	NA	10181582	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10181629_10183787_10184665_10185080
ES.17405.5	chr19	+	3599	1	NIC	ENSMUSG00000036372.15	novel	606	4	NA	NA	1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4182	False	NA	26	True	AATAAA	-15	NA	10181582	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10181600_10185200
ES.17405.6	chr19	+	493	5	NNC	ENSMUSG00000036372.15	novel	981	5	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	1803.87380032529	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4193	False	NA	26	True	AATAAA	-15	NA	10181593	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10181629_10183378_10183489_10183787_10183898_10184527_10184665_10185080
ES.17405.7	chr19	+	318	4	NNC	ENSMUSG00000036372.15	novel	606	4	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1411.60011649507	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4196	False	NA	26	True	AATAAA	-15	NA	10181596	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10181629_10183787_10183898_10184589_10184665_10185080
ES.17405.8	chr19	+	1319	3	NNC	ENSMUSG00000036372.15	novel	1026	3	NA	NA	15	-1	intron_retention	FALSE	canonical	2	3	junction_2	1397	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4196	False	NA	26	True	AATAAA	-15	NA	10181596	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10181629_10183787_10183808_10183914
ES.17405.9	chr19	+	2519	3	NIC	ENSMUSG00000036372.15	novel	447	4	NA	NA	35	-1	intron_retention	FALSE	canonical	3	3159	junction_2	411.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCCTCATGTCCATT	4216	False	NA	26	True	AATAAA	-15	NA	10181616	10185181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10183898_10184527_10184665_10185080
ES.17406.1	chr19	+	179	1	Intergenic	novelGene_14435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAACAACAACAACAAA	5993	False	NA	NA	False	NA	NA	NA	10201238	10201417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10201200_10201400
ES.17407.1	chr19	-	5487	24	NIC	ENSMUSG00000036098.16	novel	3339	26	NA	NA	5	1	intron_retention	FALSE	canonical	2	3	junction_22	5.00132307636466	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCTGACATCTTCTT	7150	False	NA	1	True	NA	NA	NA	10218104	10185634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206383_10206472_10217922
ES.17407.10	chr19	-	5181	25	NNC	ENSMUSG00000036098.16	novel	3339	26	NA	NA	10775	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	5.45801525790791	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCCTCTGACATCTTC	NA	False	NA	-1	True	NA	NA	NA	10207193	10185636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206383_10206472_10207153
ES.17407.14	chr19	-	3615	9	ISM	ENSMUSG00000036098.16	ENSMUST00000190922.7	4813	25	24434	-1028	1214	-5	3prime_fragment	FALSE	canonical	2	13	junction_7	2.77263412660235	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACTTGCCTCTGACAT	NA	False	NA	-5	True	NA	NA	NA	10193678	10185640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105
ES.17407.16	chr19	-	5611	26	NNC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	-15	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.00463784903563	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCTGCACTTGCCT	7127	False	NA	-12	True	NA	NA	NA	10218127	10185647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189909_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
ES.17407.19	chr19	-	3247	3	NNC	ENSMUSG00000036098.16	novel	3177	3	NA	NA	7844	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCC	NA	False	NA	NA	False	AATAAA	-11	NA	10210124	10203378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10206281_10206383_10206472_10209867
ES.17407.2	chr19	-	5516	26	NNC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	7989	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	5.01453886214874	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCTGACATCTTCTT	NA	False	NA	1	True	NA	NA	NA	10209979	10185634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10209867
ES.17407.3	chr19	-	5281	25	NNC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.49857936198069	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7192	False	NA	0	True	NA	NA	NA	10218062	10185635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192378_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206383_10206472_10217922
ES.17407.5	chr19	-	5165	23	NNC	ENSMUSG00000036098.16	novel	3339	26	NA	NA	-7815	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.81267495071285	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	1694	False	NA	0	True	NA	NA	NA	10202707	10185635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189909_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202549
ES.17407.6	chr19	-	5638	26	FSM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	-186	-2113	-42	0	multi-exon	FALSE	canonical	2	5	junction_20	4.43693587963585	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7100	False	NA	0	True	NA	NA	NA	10218154	10185635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
ES.17407.8	chr19	-	3477	13	NNC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.78971789756058	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	10004	False	NA	0	True	NA	NA	NA	10194397	10185635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194356
ES.17408.1	chr19	+	216	1	Intergenic	novelGene_14436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	10231344	10231560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10231300_10231600
ES.17409.1	chr19	-	5708	20	FSM	ENSMUSG00000035735.11	ENSMUST00000039327.11	5634	20	-72	-2	-72	2	multi-exon	TRUE	canonical	1	2	junction_2	2.21177909362639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCCTGTGGTCTCTC	NA	False	NA	NA	False	TATAAA	-20	NA	10282313	10222626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857_10248996_10282184
ES.17409.3	chr19	-	5274	18	NNC	ENSMUSG00000035735.11	novel	5588	20	NA	NA	-13588	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	2.52598947689222	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTCTGCCTCCTGTGGT	NA	False	NA	NA	False	TATAAA	-15	NA	10247823	10222631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10247773
ES.17409.4	chr19	-	4201	20	FSM	ENSMUSG00000035735.11	ENSMUST00000039327.11	5634	20	-15	1448	-15	-1445	multi-exon	FALSE	canonical	1	2	junction_2	2.21177909362639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGATGCCTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	10282256	10224076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857_10248996_10282184
ES.17409.5	chr19	-	2036	17	NNC	ENSMUSG00000035735.11	novel	5634	20	NA	NA	1	210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	2.66634112596269	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCATGGTGTCATAA	NA	False	NA	NA	False	NA	NA	NA	10282240	10230483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857_10248996_10252653_10252725_10282184
ES.1741.10	chr1	-	6163	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-577	-729	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	NA	False	NA	-2	True	AATAAA	-23	NA	161704828	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.11	chr1	-	5828	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-251	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	167	False	NA	-2	True	AATAAA	-23	NA	161704502	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.12	chr1	-	8717	20	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-729	intron_retention	FALSE	canonical	3	62	junction_13	24.4192376821036	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	255	False	NA	-2	True	AATAAA	-23	NA	161704414	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.14	chr1	-	5828	25	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.1059330853949	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	255	False	NA	-2	True	AATAAA	-23	NA	161704414	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161650055_161650123_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.17	chr1	-	5273	22	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-131	-729	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	47.4036557236224	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	287	False	NA	-2	True	AATAAA	-23	NA	161704382	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662044_161662124_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684543_161689823_161689872_161691482_161691595_161703879
ES.1741.18	chr1	-	5580	21	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-729	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	39.2325120276538	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	255	False	NA	-2	True	AATAAA	-23	NA	161704414	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.19	chr1	-	10984	8	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	5534	-729	intron_retention	FALSE	canonical	3	96	junction_7	22.2132521578577	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	NA	False	NA	-2	True	AATAAA	-23	NA	161666388	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322
ES.1741.2	chr1	-	5864	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-265	728	-265	-728	multi-exon	FALSE	canonical	3	81	junction_17	25.1317135224534	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCTCTTCTGTCCTTT	153	False	NA	-1	True	AATAAA	-24	NA	161704516	161644410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.20	chr1	-	5289	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-131	-729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	38.0284442343947	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	287	False	NA	-2	True	AATAAA	-23	NA	161704382	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161704307
ES.1741.21	chr1	-	5765	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-167	-730	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	38.0791137448298	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGCTCTTCTGTCCT	251	False	NA	-3	True	AATAAA	-22	NA	161704418	161644412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681421_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.23	chr1	-	5176	18	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-161	-731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	37.9782308798244	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	257	False	NA	-4	True	AATAAA	-21	NA	161704412	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161684406_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.24	chr1	-	5560	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-7	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	38.6404275937534	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	411	False	NA	-4	True	AATAAA	-21	NA	161704258	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679890_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.26	chr1	-	5905	25	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-214	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.4254629604951	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	204	False	NA	-4	True	AATAAA	-21	NA	161704465	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161654868_161654967_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.27	chr1	-	5534	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	4	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.5926678713543	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	422	False	NA	-4	True	AATAAA	-21	NA	161704247	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681308_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.28	chr1	-	5761	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-167	-731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	35.7884336548985	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	251	False	NA	-4	True	AATAAA	-21	NA	161704418	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674754_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.29	chr1	-	5659	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	14	-731	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	44.768845500082	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	432	False	NA	-4	True	AATAAA	-21	NA	161704237	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161654868_161654967_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.3	chr1	-	6119	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-164	-729	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	36.0601786453138	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	254	False	NA	-2	True	AATAAA	-23	NA	161704415	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161654868_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.30	chr1	-	5240	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-6490	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.9492428582046	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	NA	False	NA	-4	True	AATAAA	-21	NA	161691511	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161649722_161649843_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482
ES.1741.31	chr1	-	5518	25	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	150	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.7464085827498	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	568	False	NA	-4	True	AATAAA	-21	NA	161704101	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161646660_161646733_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.32	chr1	-	5648	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-121	-731	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	37.1193351411675	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	297	False	NA	-4	True	AATAAA	-21	NA	161704372	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.33	chr1	-	5715	25	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-195	-731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	43.3142385814283	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	223	False	NA	-4	True	AATAAA	-21	NA	161704446	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161661684_161661756_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.34	chr1	-	5842	25	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.3339403153937	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTGGCTCTTCTGTCC	255	False	NA	-4	True	AATAAA	-21	NA	161704414	161644413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161654868_161654967_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.35	chr1	-	3731	9	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	315	-732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.7295036054405	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCACTGGCTCTTCTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	161671607	161644414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161661600_161662763_161665287_161665379_161666322_161666392_161671570
ES.1741.36	chr1	-	5702	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-164	-732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.0284442343947	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCACTGGCTCTTCTGTC	254	False	NA	-5	True	AATAAA	-20	NA	161704415	161644414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655270_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.37	chr1	-	8293	17	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-8	-733	intron_retention	FALSE	canonical	0	0	junction_4	49.0355419568296	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCACTGGCTCTTCTGT	410	False	NA	-6	True	AATAAA	-19	NA	161704259	161644415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161660984_161661073_161661604_161662763_161671570_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.38	chr1	-	5661	22	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-239	-733	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	38.3920579466468	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCACTGGCTCTTCTGT	179	False	NA	-6	True	AATAAA	-19	NA	161704490	161644415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.39	chr1	-	7506	22	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-734	intron_retention	FALSE	canonical	3	7	junction_2	36.8905963596855	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATCACTGGCTCTTCTG	255	False	NA	-7	True	AATAAA	-18	NA	161704414	161644416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672928_161673128_161673150_161674773_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.40	chr1	-	4979	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-164	-1491	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTGTGATGATTTCT	254	False	NA	NA	False	AATAAA	-31	NA	161704415	161645173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.41	chr1	-	4978	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-157	-1494	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTATTTGTGATGATT	261	False	NA	NA	False	AATAAA	-28	NA	161704408	161645176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.42	chr1	-	4959	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-163	-1495	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	39.0471478096175	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAACTATTTGTGATGAT	255	False	NA	NA	False	AATAAA	-27	NA	161704414	161645177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.43	chr1	-	9998	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-11	-1498	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.0284442343947	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTAACTATTTGTGAT	407	False	NA	NA	False	AATAAA	-24	NA	161704262	161645180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161650055_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.44	chr1	-	4685	22	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	6	-1501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	46.2854203400425	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACACTTAACTATTTGT	424	False	NA	NA	False	AATAAA	-21	NA	161704245	161645183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161691482_161691595_161703879
ES.1741.45	chr1	-	4698	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	40	-1666	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	44.768845500082	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGCCTTTCAGATAAAA	458	False	NA	NA	False	AATAAA	-18	NA	161704211	161645348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161654868_161654967_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.46	chr1	-	4596	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	43	-1667	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGCCTTTCAGATAAA	461	False	NA	NA	False	AATAAA	-17	NA	161704208	161645349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.47	chr1	-	6371	2	NNC	ENSMUSG00000040297.13	novel	537	7	NA	NA	-684	-279	intron_retention	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	161673046	161666624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161668382_161668432
ES.1741.48	chr1	-	186	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAAAGGCGGGT	NA	False	NA	NA	False	NA	NA	NA	161704824	161704638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161704600_161704800
ES.1741.6	chr1	-	5574	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-42	-729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.1145312802569	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	376	False	NA	-2	True	AATAAA	-23	NA	161704293	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662730_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.7	chr1	-	5558	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-24	-729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8850115755479	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	394	False	NA	-2	True	AATAAA	-23	NA	161704275	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646327_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.8	chr1	-	5578	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	6	-729	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	37.1685906678126	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	424	False	NA	-2	True	AATAAA	-23	NA	161704245	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674754_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.1741.9	chr1	-	6086	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-521	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	29.1913394266289	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	NA	False	NA	-2	True	AATAAA	-23	NA	161704772	161644411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ES.17410.1	chr19	+	4865	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-87	-3173	-87	-1563	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCT	NA	False	NA	17	True	AATAAA	-17	NA	10366366	10428981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.10	chr19	+	4436	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	3	-2834	3	-1902	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-4	NA	10366456	10428642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.11	chr19	+	5125	11	FSM	ENSMUSG00000024743.17	ENSMUST00000225452.3	1572	11	-388	-3165	5	-1571	multi-exon	FALSE	canonical	0	0	junction_4	27.8467233260935	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366458	10428973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10400148_10400377_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.12	chr19	+	4630	9	NIC	ENSMUSG00000024743.17	novel	1344	10	NA	NA	168	-1571	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.4997258758747	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366621	10428973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10366878_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.13	chr19	+	207	1	Intergenic	novelGene_14437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	10376225	10376432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10376200_10376400
ES.17410.14	chr19	+	2573	1	Intergenic	novelGene_14438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATCAGTGGCATGCAAG	NA	False	NA	NA	False	NA	NA	NA	10381955	10384528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10382000_10384500
ES.17410.15	chr19	+	4709	1	ISM	ENSMUSG00000024743.17	ENSMUST00000076968.11	6624	12	59036	5	44449	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCCCTGATGTCTT	NA	False	NA	14	True	AATAAA	-14	NA	10425830	10430539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10425800_10430500
ES.17410.2	chr19	+	4674	10	FSM	ENSMUSG00000024743.17	ENSMUST00000223586.2	1344	10	-470	-2860	-77	-1876	multi-exon	FALSE	canonical	2	4	junction_3	24.2827988705514	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGGGACTCCCAGCTC	NA	False	NA	NA	False	AAAACA	-30	NA	10366376	10428668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.3	chr19	+	2188	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-69	-514	-69	-40	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGGCCCTGTGTATTT	NA	False	NA	NA	False	NA	NA	NA	10366384	10426322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.4	chr19	+	4629	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-69	-2955	-69	-1781	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	10366384	10428763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.5	chr19	+	4975	10	FSM	ENSMUSG00000024743.17	ENSMUST00000223586.2	1344	10	-458	-3173	-65	-1563	multi-exon	FALSE	canonical	2	4	junction_3	24.2827988705514	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCT	NA	False	NA	17	True	AATAAA	-17	NA	10366388	10428981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.6	chr19	+	5435	12	FSM	ENSMUSG00000024743.17	ENSMUST00000076968.11	6624	12	-382	1571	-41	-1571	multi-exon	FALSE	canonical	0	0	junction_4	29.239111132774	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366412	10428973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10403662_10404032_10407701_10407825_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.7	chr19	+	8278	8	NIC	ENSMUSG00000024743.17	novel	2000	10	NA	NA	-37	-1566	intron_retention	FALSE	canonical	3	41	junction_4	11.3694901434695	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGCCTTGGCTGTTTCC	NA	False	NA	14	True	AATAAA	-14	NA	10366416	10428978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.8	chr19	+	2986	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	-36	-1345	-36	791	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGACTCCAGAATGATC	NA	False	NA	NA	False	NA	NA	NA	10366417	10427153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17410.9	chr19	+	4700	8	NIC	ENSMUSG00000024743.17	novel	2000	10	NA	NA	-34	-1571	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.6616641138325	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTAGGGCCTTGGCTG	NA	False	NA	9	True	AATAAA	-9	NA	10366419	10428973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10366878_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ES.17411.1	chr19	-	161	1	Intergenic	novelGene_14439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	10424189	10424028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10424000_10424200
ES.17412.1	chr19	-	2042	1	FSM	ENSMUSG00000090291.4	ENSMUST00000171400.4	2103	1	55	6	55	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGTGTGTTTCCCAC	NA	False	NA	NA	False	CATAAA	-16	NA	10434782	10432740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10432700_10434800
ES.17413.1	chr19	+	3694	10	NNC	ENSMUSG00000034820.5	novel	652	5	NA	NA	-248	78	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	89.3902527345718	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATTCTGCATTGAATAGA	NA	False	NA	14	True	AATAAA	-19	NA	10502381	10525095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502587_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.10	chr19	+	3611	11	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	8	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	98.4443497616801	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCATTGTATTTTTTT	NA	False	NA	24	True	AATAAA	-24	NA	10502606	10525025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510389_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.100	chr19	+	6585	22	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-25	0	intron_retention	FALSE	canonical	3	2606	junction_4	267.288229693016	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	605	False	NA	56	True	AATAAA	-16	NA	10582925	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.103	chr19	+	4797	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-23	3	intron_retention	FALSE	canonical	1	38	junction_9	716.258500591387	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	607	False	NA	59	True	AATAAA	-19	NA	10582927	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.105	chr19	+	4567	25	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	0	intron_retention	FALSE	non_canonical	0	0	junction_23	911.516478145379	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	611	False	NA	56	True	AATAAA	-16	NA	10582931	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599192_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605787_10605913_10606442
ES.17413.106	chr19	+	4469	26	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	-6	intron_retention	FALSE	non_canonical	0	0	junction_21	907.891843778762	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	611	False	NA	50	True	AATAAA	-10	NA	10582931	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603360_10603955_10604127_10604489_10605023_10605125_10605228_10605788_10605913_10606442
ES.17413.107	chr19	+	4608	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	145	junction_5	867.511475428424	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTCTTATTGGTCTCT	611	False	NA	54	True	AATAAA	-14	NA	10582931	10607181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.109	chr19	+	4056	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	689.336870912909	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	611	False	NA	59	True	AATAAA	-19	NA	10582931	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.11	chr19	+	3698	12	NNC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	105.355517767068	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	10502606	10525019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510389_10510497_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.110	chr19	+	4531	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	-6	intron_retention	FALSE	canonical	3	2606	junction_4	269.007758995907	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	611	False	NA	50	True	AATAAA	-10	NA	10582931	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.111	chr19	+	3836	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	666.707562531654	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGAAACTCTTATTGG	611	False	NA	49	True	AATAAA	-9	NA	10582931	10607176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442_10606706_10607080
ES.17413.117	chr19	+	4219	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	675.87224380117	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAACTCTTATTGGTC	612	False	NA	51	True	AATAAA	-11	NA	10582932	10607178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602080_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.118	chr19	+	6008	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	-6	intron_retention	FALSE	canonical	3	2606	junction_3	264.165491737269	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	612	False	NA	50	True	AATAAA	-10	NA	10582932	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10605229_10605788_10605913_10606442
ES.17413.119	chr19	+	4576	25	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	intron_retention	FALSE	canonical	3	2606	junction_4	259.361150902024	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.12	chr19	+	6300	8	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-22	82	intron_retention	FALSE	canonical	3	42	junction_3	74.6797243198567	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502607	10525099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.120	chr19	+	4196	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	678.749476663523	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596669_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.123	chr19	+	8034	24	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	intron_retention	FALSE	canonical	3	2606	junction_4	259.39921864065	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.125	chr19	+	4216	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	672.619392846457	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605220_10605783_10605913_10606442
ES.17413.127	chr19	+	4201	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	678.361222524439	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGAAGAAACTCTTATT	612	False	NA	47	True	AATAAA	-7	NA	10582932	10607174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590389_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.13	chr19	+	4599	9	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-22	75	intron_retention	FALSE	canonical	3	17	junction_3	90.9401417142067	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGATTCTGCATTGAAT	NA	False	NA	11	True	AATAAA	-16	NA	10502607	10525092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.131	chr19	+	4094	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	671.362264311026	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585711_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.133	chr19	+	4209	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	675.87224380117	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	612	False	NA	59	True	AATAAA	-19	NA	10582932	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602098_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.135	chr19	+	4216	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	678.361222524439	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGTCTCTGCTTTTCT	612	False	NA	62	True	AATAAA	-22	NA	10582932	10607189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591478_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.136	chr19	+	3831	25	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	686.288233856997	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	612	False	NA	57	True	AATAAA	-17	NA	10582932	10607184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584310_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.14	chr19	+	4073	10	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-22	7	intron_retention	FALSE	canonical	3	17	junction_4	89.7403662424738	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTGTATTTTTT	NA	False	NA	23	True	AATAAA	-23	NA	10502607	10525024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509699_10510183_10510497_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.141	chr19	+	5476	25	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-17	-6	intron_retention	FALSE	canonical	3	166	junction_4	655.787491779921	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	613	False	NA	50	True	AATAAA	-10	NA	10582933	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.142	chr19	+	5372	25	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-17	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	695.442843276059	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAACTCTTATTGGTCT	613	False	NA	52	True	AATAAA	-12	NA	10582933	10607179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588067_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599534_10599653_10599862_10600702_10600799_10600890_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.147	chr19	+	5300	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-15	1	intron_retention	FALSE	canonical	3	2606	junction_4	267.583006934297	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	615	False	NA	57	True	AATAAA	-17	NA	10582935	10607184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.150	chr19	+	3917	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-12	2151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	677.679001004433	3519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCATGTGTACTCTGGTT	618	False	NA	NA	False	NA	NA	NA	10582938	10609334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10608887
ES.17413.152	chr19	+	3981	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	677.679001004433	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	624	False	NA	59	True	AATAAA	-19	NA	10582944	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605876_10606632
ES.17413.153	chr19	+	4227	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1024.0710093049	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	626	False	NA	50	True	AATAAA	-10	NA	10582946	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599343_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.155	chr19	+	4033	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	1	49	junction_23	671.529935594833	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	629	False	NA	59	True	AATAAA	-19	NA	10582949	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10605125_10605229_10605788_10605913_10606442
ES.17413.156	chr19	+	4198	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	679.395385792902	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	630	False	NA	59	True	AATAAA	-19	NA	10582950	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599343_10599423_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.157	chr19	+	4179	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	678.713785307816	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	630	False	NA	50	True	AATAAA	-10	NA	10582950	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589021_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.159	chr19	+	4199	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	900.186505987582	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAGAAGAAACTCTTAT	630	False	NA	46	True	AATAAA	-6	NA	10582950	10607173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591469_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605237_10605788_10605913_10606442
ES.17413.160	chr19	+	6419	21	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	intron_retention	FALSE	canonical	1	38	junction_9	736.031213672355	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	630	False	NA	59	True	AATAAA	-19	NA	10582950	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10603355_10603955_10604127_10604489_10605913_10606442
ES.17413.161	chr19	+	4565	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	intron_retention	FALSE	canonical	3	2606	junction_4	267.588412305167	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	630	False	NA	59	True	AATAAA	-19	NA	10582950	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.162	chr19	+	4294	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	3	intron_retention	FALSE	canonical	3	2606	junction_4	270.997712167465	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	630	False	NA	59	True	AATAAA	-19	NA	10582950	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.164	chr19	+	4223	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	896.219664964914	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGGTCTCTGCTTTTCT	630	False	NA	62	True	AATAAA	-22	NA	10582950	10607189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584191_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605787_10605913_10606442
ES.17413.166	chr19	+	8374	24	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	2670	intron_retention	FALSE	canonical	1	38	junction_8	708.919324532525	3520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	630	False	NA	NA	False	NA	NA	NA	10582950	10609853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788
ES.17413.167	chr19	+	5944	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	1	-7	intron_retention	FALSE	canonical	3	2606	junction_3	265.52110000046	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGAAACTCTTATTGG	631	False	NA	49	True	AATAAA	-9	NA	10582951	10607176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.17	chr19	+	3932	10	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-22	2	intron_retention	FALSE	canonical	3	29	junction_4	96.2940455577423	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	10502607	10525019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.172	chr19	+	4183	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	679.079850817989	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	631	False	NA	59	True	AATAAA	-19	NA	10582951	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604507_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.173	chr19	+	4193	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.890632963762	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	632	False	NA	59	True	AATAAA	-19	NA	10582952	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583124_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.175	chr19	+	4191	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	1	51	junction_4	662.174328795655	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTGGTCTCTGCTTTTC	634	False	NA	61	True	AATAAA	-21	NA	10582954	10607188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588074_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.176	chr19	+	7333	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	5	-6	intron_retention	FALSE	canonical	3	2833	junction_10	222.057676224552	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	635	False	NA	50	True	AATAAA	-10	NA	10582955	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605913_10606442
ES.17413.18	chr19	+	3651	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-22	79	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	89.3263678876512	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCTGCATTGAATAGAT	NA	False	NA	15	True	AATAAA	-20	NA	10502607	10525096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.180	chr19	+	4353	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1039.48006946493	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTCTTATTGGTCTCT	636	False	NA	54	True	AATAAA	-14	NA	10582956	10607181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587308_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592965_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.182	chr19	+	4253	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1020.19513316785	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	636	False	NA	50	True	AATAAA	-10	NA	10582956	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584178_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.183	chr19	+	7086	21	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	7	3	intron_retention	FALSE	canonical	3	2606	junction_4	271.394730973171	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	637	False	NA	59	True	AATAAA	-19	NA	10582957	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10604127_10604489_10605229_10605788
ES.17413.184	chr19	+	6179	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	8	-6	intron_retention	FALSE	canonical	3	2606	junction_3	253.19211665035	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	638	False	NA	50	True	AATAAA	-10	NA	10582958	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605913_10606442
ES.17413.185	chr19	+	4354	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	675.87224380117	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	638	False	NA	50	True	AATAAA	-10	NA	10582958	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10601918_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.187	chr19	+	4535	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	8	3	intron_retention	FALSE	canonical	3	2606	junction_3	253.804491686022	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	638	False	NA	59	True	AATAAA	-19	NA	10582958	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.189	chr19	+	4995	26	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	8	1	intron_retention	FALSE	non_canonical	0	0	junction_15	1070.59022973311	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	638	False	NA	57	True	AATAAA	-17	NA	10582958	10607184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599858_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.19	chr19	+	3641	11	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-22	80	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	93.34157701689	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGCATTGAATAGATT	NA	False	NA	16	True	AATAAA	-21	NA	10502607	10525097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.190	chr19	+	4169	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.890632963762	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	639	False	NA	56	True	AATAAA	-16	NA	10582959	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584229_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.191	chr19	+	4155	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	9	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	901.542055814573	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAATCTAAGAAGAAACT	639	False	NA	41	True	AATAAA	-1	NA	10582959	10607168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596585_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604604_10604874_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.194	chr19	+	4290	26	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	10	-6	intron_retention	FALSE	canonical	0	0	junction_5	685.269995257344	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	640	False	NA	50	True	AATAAA	-10	NA	10582960	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588185_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605229_10605788_10605913_10606442
ES.17413.196	chr19	+	5615	24	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	12	-6	intron_retention	FALSE	canonical	3	2606	junction_3	261.528240910902	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	642	False	NA	50	True	AATAAA	-10	NA	10582962	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.198	chr19	+	3917	25	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	12	3	combination_of_known_splicesites	FALSE	canonical	1	38	junction_9	916.375014209066	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	642	False	NA	59	True	AATAAA	-19	NA	10582962	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10605125_10605229_10605788_10605913_10606442
ES.17413.199	chr19	+	4181	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	678.658479178553	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	642	False	NA	59	True	AATAAA	-19	NA	10582962	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592946_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.2	chr19	+	3638	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-55	-83	-55	83	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTGAATAGATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	10502574	10525100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.20	chr19	+	4623	9	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-21	73	intron_retention	FALSE	canonical	3	17	junction_3	80.3679040413522	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACGGATTCTGCATTGA	NA	False	NA	9	True	AATAAA	-14	NA	10502608	10525090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10510497_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.200	chr19	+	4043	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	679.079850817989	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	643	False	NA	50	True	AATAAA	-10	NA	10582963	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604040_10604539_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.201	chr19	+	4155	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	675.87224380117	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	645	False	NA	50	True	AATAAA	-10	NA	10582965	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10600994_10602101_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.203	chr19	+	5835	22	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	15	-6	intron_retention	FALSE	canonical	1	38	junction_9	728.12737479297	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	645	False	NA	50	True	AATAAA	-10	NA	10582965	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.206	chr19	+	4207	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1024.59599987652	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	646	False	NA	50	True	AATAAA	-10	NA	10582966	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598910_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.207	chr19	+	3704	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	276	479	16	6	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	3505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGGAATGGGCTGGGC	646	False	NA	NA	False	ACTAAA	-15	NA	10582966	10606704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.209	chr19	+	6768	24	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-17	3	intron_retention	FALSE	canonical	3	2833	junction_10	230.284692712179	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	649	False	NA	59	True	AATAAA	-19	NA	10582969	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.21	chr19	+	3305	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-21	62	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAGAGAATTATTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	10502608	10524828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.212	chr19	+	8405	22	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-16	3	intron_retention	FALSE	canonical	3	2833	junction_9	223.34782164397	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	650	False	NA	59	True	AATAAA	-19	NA	10582970	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605913_10606442
ES.17413.216	chr19	+	4173	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	668.978614078712	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	651	False	NA	59	True	AATAAA	-19	NA	10582971	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585266_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.219	chr19	+	12513	20	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-14	2668	intron_retention	FALSE	canonical	3	2833	junction_9	238.861786204046	3520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAGAA	652	False	NA	NA	False	NA	NA	NA	10582972	10609851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.22	chr19	+	4316	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-21	2	intron_retention	FALSE	canonical	3	71	junction_4	61.2775448267961	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	10502608	10525019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.223	chr19	+	5373	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	2606	junction_4	267.013649943591	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	655	False	NA	50	True	AATAAA	-10	NA	10582975	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788
ES.17413.224	chr19	+	4246	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_19	677.705221216352	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	655	False	NA	59	True	AATAAA	-19	NA	10582975	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602281_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.225	chr19	+	5579	25	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-11	1	intron_retention	FALSE	canonical	3	2606	junction_4	270.743033023115	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	655	False	NA	57	True	AATAAA	-17	NA	10582975	10607184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.226	chr19	+	5497	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-11	3	intron_retention	FALSE	canonical	3	2606	junction_4	265.546314305664	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	655	False	NA	59	True	AATAAA	-19	NA	10582975	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10605229_10605788_10605913_10606442
ES.17413.228	chr19	+	5073	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-10	-6	intron_retention	FALSE	non_canonical	0	0	junction_14	883.068739073575	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	656	False	NA	50	True	AATAAA	-10	NA	10582976	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599343_10599423_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.23	chr19	+	3543	11	NNC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.0228775903036	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502609	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510226_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.230	chr19	+	6127	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	2606	junction_3	265.189628862439	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	660	False	NA	50	True	AATAAA	-10	NA	10582980	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788
ES.17413.232	chr19	+	6527	21	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	2606	junction_4	262.860281328313	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	662	False	NA	50	True	AATAAA	-10	NA	10582982	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10604127_10604489
ES.17413.233	chr19	+	4037	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	679.395385792902	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	663	False	NA	59	True	AATAAA	-19	NA	10582983	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599295_10599503_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.235	chr19	+	4963	26	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	3	-6	intron_retention	FALSE	canonical	1	9	junction_19	1056.74947948887	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	669	False	NA	50	True	AATAAA	-10	NA	10582989	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602281_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10605125_10605229_10605788_10605913_10606442
ES.17413.238	chr19	+	4146	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	672.619392846457	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	674	False	NA	50	True	AATAAA	-10	NA	10582994	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605215_10605777_10605913_10606442
ES.17413.239	chr19	+	4098	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.890632963762	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	679	False	NA	56	True	AATAAA	-16	NA	10582999	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584260_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.24	chr19	+	4289	10	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-20	80	intron_retention	FALSE	canonical	3	42	junction_3	69.8013053045731	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGCATTGAATAGATT	NA	False	NA	16	True	AATAAA	-21	NA	10502609	10525097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.246	chr19	+	4975	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	16	1	intron_retention	FALSE	canonical	3	2606	junction_4	265.716889941155	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATTGGTCTCTGCT	682	False	NA	57	True	AATAAA	-17	NA	10583002	10607184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.247	chr19	+	4680	26	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	312	-3	16	3	intron_retention	FALSE	canonical	3	2606	junction_4	270.382910702581	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	682	False	NA	59	True	AATAAA	-19	NA	10583002	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788
ES.17413.248	chr19	+	5956	22	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	16	3	intron_retention	FALSE	canonical	3	2606	junction_4	271.15994225865	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	682	False	NA	59	True	AATAAA	-19	NA	10583002	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602696_10603259_10604127_10604489_10605229_10605788
ES.17413.25	chr19	+	6299	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	77	intron_retention	FALSE	canonical	3	152	junction_5	40.9107259774255	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	13	True	AATAAA	-18	NA	10502609	10525094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10517153_10518044_10518213_10523055
ES.17413.250	chr19	+	4282	27	NNC	ENSMUSG00000024740.11	novel	854	5	NA	NA	60	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	676.890632963762	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	813	False	NA	50	True	AATAAA	-10	NA	10583133	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583403_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.252	chr19	+	5056	23	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	417	-6	intron_retention	FALSE	canonical	3	2606	junction_3	265.07519984006	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	1802	False	NA	50	True	AATAAA	-10	NA	10584122	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.254	chr19	+	3876	25	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	2464	-4	1449	4	3prime_fragment	FALSE	canonical	3	2606	junction_2	273.04329123582	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATTGGTCTCTGCTTTT	2834	False	NA	60	True	AATAAA	-20	NA	10585154	10607187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.255	chr19	+	3911	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	1449	3	combination_of_known_junctions	FALSE	canonical	3	145	junction_3	874.882340889334	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	2834	False	NA	59	True	AATAAA	-19	NA	10585154	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.256	chr19	+	5273	20	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	1906	0	intron_retention	FALSE	canonical	3	2606	junction_1	231.678770351491	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	3291	False	NA	56	True	AATAAA	-16	NA	10585611	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10604127_10604489_10605913_10606442
ES.17413.257	chr19	+	3653	24	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	1995	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	700.247944206079	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	3380	False	NA	50	True	AATAAA	-10	NA	10585700	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10600995_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.258	chr19	+	3508	24	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	2018	-6	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_21	688.117019217012	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	3403	False	NA	50	True	AATAAA	-10	NA	10585723	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10604893_10605125_10605229_10605788_10605913_10606442
ES.17413.26	chr19	+	3744	12	NNC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-20	78	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	108.251238230851	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATTCTGCATTGAATAGA	NA	False	NA	14	True	AATAAA	-19	NA	10502609	10525095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510389_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.260	chr19	+	4823	22	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-888	3	intron_retention	FALSE	canonical	3	2833	junction_7	228.118509599218	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	4576	False	NA	59	True	AATAAA	-19	NA	10586896	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.263	chr19	+	3448	23	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	352	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	712.370204213539	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	5816	False	NA	50	True	AATAAA	-10	NA	10588136	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10588181_10589013_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.264	chr19	+	3315	21	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	7544	5	-1994	-5	3prime_fragment	FALSE	canonical	3	2833	junction_5	228.913302365765	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAACTCTTATTGGTC	1120	False	NA	51	True	AATAAA	-11	NA	10590234	10607178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.265	chr19	+	4978	17	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-1889	3	intron_retention	FALSE	canonical	3	2833	junction_5	216.201548040249	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	1225	False	NA	59	True	AATAAA	-19	NA	10590339	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
ES.17413.266	chr19	+	3159	20	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-759	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	766.339444400666	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	2355	False	NA	56	True	AATAAA	-16	NA	10591469	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599427_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.268	chr19	+	2773	16	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	224	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	856.323806875777	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	7467	False	NA	50	True	AATAAA	-10	NA	10596581	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10596693_10598904_10599084_10599184_10599349_10599427_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.269	chr19	+	2667	15	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	2545	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	875.678547394731	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAACTCTTATTGGTCT	9788	False	NA	52	True	AATAAA	-12	NA	10598902	10607179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605228_10605788_10605913_10606442
ES.17413.27	chr19	+	3372	11	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-20	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.6085446131038	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGCATTGAATAGATT	NA	False	NA	16	True	AATAAA	-21	NA	10502609	10525097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512624_10512824_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.272	chr19	+	2492	14	ISM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	16490	3	2823	-3	3prime_fragment	FALSE	canonical	3	3022	junction_9	187.239649621902	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTCTTATTGGTCTC	NA	False	NA	53	True	AATAAA	-13	NA	10599180	10607180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.274	chr19	+	2306	13	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-2987	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	955.704840971079	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	NA	False	NA	50	True	AATAAA	-10	NA	10599423	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602547_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.276	chr19	+	3727	5	NIC	ENSMUSG00000024740.11	novel	1589	11	NA	NA	-1048	-6	intron_retention	FALSE	canonical	3	3022	junction_3	213.124963343105	3515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	NA	False	NA	50	True	AATAAA	-10	NA	10601362	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788
ES.17413.277	chr19	+	2431	2	ISM	ENSMUSG00000024740.11	ENSMUST00000236279.2	1279	4	220	-479	220	-6	intron_retention	FALSE	canonical	3	3607	junction_1	0	3515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	NA	False	NA	50	True	AATAAA	-10	NA	10604186	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10605229_10605788
ES.17413.278	chr19	+	3161	18	NIC	ENSMUSG00000043789.9	novel	4543	20	NA	NA	94	676	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	0.844276476141607	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTTCAGAGCATGTGT	3481	False	NA	NA	False	NA	NA	NA	10611739	10642512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10611948_10614507_10614603_10614680_10614771_10615415_10615545_10618989_10619107_10621510_10621628_10622357_10622487_10623897_10624317_10624395_10624490_10625789_10625873_10627924_10628013_10630413_10630500_10631597_10631716_10632715_10632802_10633973_10634071_10635363_10635447_10637343_10637408_10641454
ES.17413.28	chr19	+	3480	12	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-19	77	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	101.024585830127	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	13	True	AATAAA	-18	NA	10502610	10525094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055_10524108_10524273
ES.17413.29	chr19	+	4583	9	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-18	7	intron_retention	FALSE	canonical	3	42	junction_3	73.1170935896662	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTGTATTTTTT	NA	False	NA	23	True	AATAAA	-23	NA	10502611	10525024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.3	chr19	+	3343	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	-32	189	-32	62	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAGAGAATTATTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	10502597	10524828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.30	chr19	+	3570	11	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.979658185488	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTTTTATACTGCATT	NA	False	NA	14	True	AATAAA	-14	NA	10502617	10525015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503305_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.31	chr19	+	3950	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-10	71	intron_retention	FALSE	canonical	3	152	junction_4	40.5028934151623	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTACGGATTCTGCATT	NA	False	NA	7	True	AATAAA	-12	NA	10502619	10525088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.32	chr19	+	4404	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-5	79	intron_retention	FALSE	canonical	3	152	junction_4	37.0031670941826	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCTGCATTGAATAGAT	NA	False	NA	15	True	AATAAA	-20	NA	10502624	10525096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.33	chr19	+	3470	10	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	80.9335957040106	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCATTGTATTTTTTT	NA	False	NA	24	True	AATAAA	-24	NA	10502624	10525025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510226_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.35	chr19	+	3846	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	71	junction_4	62.2032957326218	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502625	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.36	chr19	+	3688	10	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	85.8499983821911	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGCATTGTATTTTT	NA	False	NA	22	True	AATAAA	-22	NA	10502629	10525023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.37	chr19	+	5137	9	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	182	junction_3	29.1523476756161	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502630	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.38	chr19	+	3939	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	21	junction_3	88.8933332222278	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502633	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.39	chr19	+	3481	11	NNC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.4979187597383	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTATACTGCATTGTA	NA	False	NA	17	True	AATAAA	-17	NA	10502645	10525018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510226_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.4	chr19	+	3812	10	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-28	75	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	76.1460584811993	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGATTCTGCATTGAAT	NA	False	NA	11	True	AATAAA	-16	NA	10502601	10525092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510497_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.40	chr19	+	3777	11	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	17	8	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	95.7415270402556	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCATTGTATTTTTTT	NA	False	NA	24	True	AATAAA	-24	NA	10502646	10525025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510497_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.41	chr19	+	4403	8	NIC	ENSMUSG00000034820.5	novel	1760	9	NA	NA	32	1855	intron_retention	FALSE	canonical	3	152	junction_4	39.4378870982652	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	10502661	10520289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044
ES.17413.42	chr19	+	4026	10	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	53	0	intron_retention	FALSE	non_canonical	0	0	junction_1	80.6300804696561	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502682	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502735_10502779_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.43	chr19	+	4097	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-59	2	intron_retention	FALSE	canonical	3	43	junction_2	91.9264332811976	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	10502708	10525019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.44	chr19	+	3812	9	NNC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-55	76	intron_retention	FALSE	non_canonical	0	0	junction_4	110.191240010266	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	12	True	AATAAA	-17	NA	10502712	10525093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10503425_10509144_10509364_10509494_10509561_10510183_10510199_10512576_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.45	chr19	+	3791	12	NNC	ENSMUSG00000034820.5	novel	703	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	110.526388906125	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502757	10525017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502965_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510389_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.46	chr19	+	3730	11	NNC	ENSMUSG00000034820.5	novel	703	5	NA	NA	-5	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	106.557965446043	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATTTTTTTCCTTTTGT	NA	False	NA	32	True	AATAAA	-32	NA	10502762	10525033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502965_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523058
ES.17413.47	chr19	+	3654	11	NIC	ENSMUSG00000034820.5	novel	643	5	NA	NA	101	73	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	104.539418402821	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACGGATTCTGCATTGA	NA	False	NA	9	True	AATAAA	-14	NA	10502868	10525090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502965_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.48	chr19	+	3607	10	NIC	ENSMUSG00000034820.5	novel	703	5	NA	NA	108	80	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	78.4219357067906	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGCATTGAATAGATT	NA	False	NA	16	True	AATAAA	-21	NA	10502875	10525097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502965_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.49	chr19	+	172	2	NNC	ENSMUSG00000043789.9	novel	754	5	NA	NA	-105825	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3997	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	10505751	10616536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10505848_10616460
ES.17413.5	chr19	+	3583	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-28	82	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502601	10525099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.50	chr19	+	3803	8	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-16	77	intron_retention	FALSE	canonical	3	43	junction_1	89.5455647325165	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	13	True	AATAAA	-18	NA	10509166	10525094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10509364_10509621_10509699_10510183_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.51	chr19	+	3578	7	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	-215	76	intron_retention	FALSE	canonical	3	29	junction_1	77.4584117804874	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	12	True	AATAAA	-17	NA	10509537	10525093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10509561_10510183_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.52	chr19	+	3842	6	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	48	7	intron_retention	FALSE	canonical	3	71	junction_1	66.4993233048277	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTGTATTTTTT	NA	False	NA	23	True	AATAAA	-23	NA	10509800	10525024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.53	chr19	+	6180	2	NNC	ENSMUSG00000034820.5	novel	3124	7	NA	NA	5732	77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGATTCTGCATTGAATAG	NA	False	NA	13	True	AATAAA	-18	NA	10515484	10525094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10515860_10519289
ES.17413.54	chr19	+	8200	2	ISM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	13298	-2	6175	2	intron_retention	FALSE	canonical	3	251	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	False	NA	18	True	AATAAA	-18	NA	10515927	10525019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10517153_10518044
ES.17413.55	chr19	+	2213	2	ISM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	15413	-81	8290	81	3prime_fragment	FALSE	canonical	3	242	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	17	True	AATAAA	-22	NA	10518042	10525098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10518213_10523055
ES.17413.56	chr19	+	1027	1	Antisense	novelGene_ENSMUSG00000024667.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAAAAAAAACAG	2721	False	NA	NA	False	NA	NA	NA	10528315	10529342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_10528300_10529300
ES.17413.57	chr19	+	3135	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	-1	-4	-1	4	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTTGTTCAGACTGT	NA	False	NA	18	True	ATTAAA	-21	NA	10554534	10567197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.58	chr19	+	3323	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	2	-195	2	195	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATTTTAAACAAA	NA	False	NA	NA	False	NA	NA	NA	10554537	10567388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.59	chr19	+	1697	8	NNC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	1	195	intron_retention	FALSE	canonical	0	0	junction_7	33.6979379251634	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATTTTAAACAAA	NA	False	NA	NA	False	NA	NA	NA	10554815	10567388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10567236
ES.17413.60	chr19	+	2235	7	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.2845237853262	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554817	10567193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10554928_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.61	chr19	+	1423	8	NNC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.4810333149491	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTCTTCTGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	10554817	10566159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10555057_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.62	chr19	+	2582	5	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	42.9680113572876	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554817	10567193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10554928_10557826_10557927_10562545_10562755_10564054_10564210_10565185
ES.17413.63	chr19	+	6478	33	Fusion	ENSMUSG00000024740.11_ENSMUSG00000034445.9	novel	2634	9	NA	NA	1	7	intron_retention	FALSE	canonical	0	0	junction_7	1395.65394058663	3611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTCTCTGCTTTTCTC	NA	False	NA	63	True	AATAAA	-23	NA	10554818	10607190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.64	chr19	+	2456	8	NNC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.4810333149491	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554818	10567193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10555057_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.65	chr19	+	4063	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	15	junction_1	30.3946826713798	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTCTCTTTTGTTCAG	NA	False	NA	13	True	ATTAAA	-16	NA	10554819	10567192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10554928_10555097_10555448_10556345_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.66	chr19	+	7913	31	Fusion	ENSMUSG00000024740.11_ENSMUSG00000034445.9	novel	2634	9	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_5	1296.94841026499	3611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTCTTATTGGTCTCT	NA	False	NA	54	True	AATAAA	-14	NA	10554819	10607181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602281_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.67	chr19	+	2755	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	2	-1283	2	2	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTTGTTCAGACT	NA	False	NA	16	True	ATTAAA	-19	NA	10554819	10567195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.68	chr19	+	2325	8	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	27.7319531315376	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTCTCTTTTGTTCAG	NA	False	NA	13	True	ATTAAA	-16	NA	10554819	10567192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10554928_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.69	chr19	+	3741	7	NIC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	61	junction_1	13.4339950209244	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGTCTCTTTTGTTCA	NA	False	NA	12	True	ATTAAA	-15	NA	10554820	10567191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.7	chr19	+	3672	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	-23	-334	-23	83	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTGAATAGATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	10502606	10525100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.70	chr19	+	5122	6	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	86	junction_2	5.53534100123922	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	False	NA	7	True	ATTAAA	-10	NA	10554822	10567186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.71	chr19	+	3921	8	NNC	ENSMUSG00000034445.9	novel	2661	8	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_2	42.0170033608844	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACATCAGAGGTCTCTT	NA	False	NA	5	True	ATTAAA	-8	NA	10554850	10567184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10555258_10556345_10557746_10557828_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.72	chr19	+	2327	7	NNC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4662793586331	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTTGTTCAGACT	NA	False	NA	16	True	ATTAAA	-19	NA	10554859	10567195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10555057_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565885
ES.17413.73	chr19	+	1735	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	359	1036	40	40	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATGTCTCTTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	10554894	10566157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ES.17413.74	chr19	+	4408	29	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-1279	3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	1005.44056999701	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	3925	False	NA	59	True	AATAAA	-19	NA	10581411	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10581671_10583039_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.75	chr19	+	4158	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-1065	3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	665.491538379205	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	4139	False	NA	59	True	AATAAA	-19	NA	10581625	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10581671_10583039_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.76	chr19	+	4341	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	127	-9	127	9	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCTGCTTTTCTCCT	497	False	NA	65	True	AATAAA	-25	NA	10582817	10607192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.77	chr19	+	5294	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-108	8	intron_retention	FALSE	canonical	2	9	junction_19	881.969615330859	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTCTCTGCTTTTCTCC	522	False	NA	64	True	AATAAA	-24	NA	10582842	10607191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602281_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.78	chr19	+	4302	28	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-60	7	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	848.081981892655	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTCTCTGCTTTTCTC	570	False	NA	63	True	AATAAA	-23	NA	10582890	10607190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.8	chr19	+	3746	11	NNC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	76	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	102.882505801521	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTCTGCATTGAATA	NA	False	NA	12	True	AATAAA	-17	NA	10502606	10525093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10502692_10503315_10503425_10509077_10509364_10510183_10510288_10510389_10510497_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.80	chr19	+	5165	27	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-49	7	intron_retention	FALSE	canonical	3	166	junction_4	641.523782344512	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTCTCTGCTTTTCTC	581	False	NA	63	True	AATAAA	-23	NA	10582901	10607190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.81	chr19	+	4461	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-47	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1038.21863108207	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	583	False	NA	50	True	AATAAA	-10	NA	10582903	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587308_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602281_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.82	chr19	+	12096	20	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-47	3	intron_retention	FALSE	canonical	3	2606	junction_4	263.087306322298	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	583	False	NA	59	True	AATAAA	-19	NA	10582903	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10592333_10592851_10596489_10596583_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10604127_10604489_10605913_10606442
ES.17413.83	chr19	+	4242	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	678.658479178553	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAACTCTTATTGGTC	589	False	NA	51	True	AATAAA	-11	NA	10582909	10607178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596405_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.84	chr19	+	4258	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-41	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	667.372384361448	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	589	False	NA	59	True	AATAAA	-19	NA	10582909	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585599_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.89	chr19	+	4275	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	677.679001004433	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	592	False	NA	56	True	AATAAA	-16	NA	10582912	10607183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605951_10606442
ES.17413.9	chr19	+	3682	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	-23	82	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	81.5971200472174	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502606	10525099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ES.17413.91	chr19	+	4282	28	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-38	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	1012.00119688495	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	592	False	NA	50	True	AATAAA	-10	NA	10582912	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585599_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.93	chr19	+	5318	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-38	3	intron_retention	FALSE	canonical	3	2606	junction_3	269.249101019855	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	592	False	NA	59	True	AATAAA	-19	NA	10582912	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.95	chr19	+	3845	25	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-38	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	706.088018543408	3517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	592	False	NA	59	True	AATAAA	-19	NA	10582912	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596669_10599453_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.97	chr19	+	6007	24	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-38	3	intron_retention	FALSE	canonical	3	2606	junction_4	272.417990295562	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	592	False	NA	59	True	AATAAA	-19	NA	10582912	10607186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10602696_10603259_10603355_10603955_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ES.17413.99	chr19	+	4237	27	NNC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	900.236357031147	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAACTCTTATTGGT	599	False	NA	50	True	AATAAA	-10	NA	10582919	10607177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604487_10604600_10604852_10605023_10605125_10605227_10605775_10605913_10606442
ES.17414.1	chr19	-	3882	15	Fusion	ENSMUSG00000035179.5_ENSMUSG00000024668.9	novel	1515	14	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_1	54.2855733080876	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTTCAGTCACTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	10502498	10451600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_10451693_10451853_10451933_10452294_10452466_10454391_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10461029_10463034_10463090_10463719_10463827_10494343_10494454_10494683_10494751_10502422
ES.17414.10	chr19	-	2535	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-658	1104	369	3	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTTTGATCTACATC	NA	False	NA	NA	False	AATAAA	-20	NA	10503137	10479001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ES.17414.11	chr19	-	1813	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-115	-701	-25	-2	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTATTGTTTGATCT	NA	False	NA	NA	False	AATAAA	-15	NA	10502571	10479006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ES.17414.12	chr19	-	2060	5	FSM	ENSMUSG00000024668.9	ENSMUST00000235853.2	2025	5	-37	2	-11	-2	multi-exon	FALSE	canonical	2	8	junction_4	101.25802437338	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTATTGTTTGATCT	NA	False	NA	NA	False	AATAAA	-15	NA	10502557	10479006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
ES.17414.13	chr19	-	1789	3	NIC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATATATTATTGTTTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	10502508	10479008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10480494_10494532_10494751_10502422
ES.17414.14	chr19	-	1391	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-224	1814	-157	0	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATTGAGGCAAAC	NA	False	NA	-4	True	NA	NA	NA	10502703	10479711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ES.17414.15	chr19	-	5347	3	NIC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	8	-1	intron_retention	FALSE	canonical	3	28	junction_2	86.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGGCATTGAGGCAAA	NA	False	NA	-5	True	NA	NA	NA	10502471	10479712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10480494_10494343_10494751_10498312
ES.17414.16	chr19	-	1261	5	NNC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	100.446503174575	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGGCATTGAGGCA	NA	False	NA	-7	True	NA	NA	NA	10502488	10479714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498401_10502422
ES.17414.18	chr19	-	992	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-96	101	-6	-2	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTCACAATTATCTTCA	NA	False	NA	-101	True	AAGAAA	-15	NA	10502552	10479808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ES.17414.19	chr19	-	1266	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-216	1931	-149	-22	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATTGACAGTTCTCT	NA	False	NA	-121	True	TTTAAA	-36	NA	10502695	10479828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ES.17414.2	chr19	-	2778	14	NNC	ENSMUSG00000035179.5	novel	1507	14	NA	NA	-1784	2	intron_retention	FALSE	canonical	0	0	junction_1	0.842650088469486	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTTCAGTCACTGTC	233	False	NA	NA	False	ATTAAA	-15	NA	10462076	10451600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10451689_10451853_10451933_10452294_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10459185_10459596_10459733_10460191_10460282_10461061
ES.17414.20	chr19	-	780	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-94	311	-4	-36	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGATAAGTCCTTTG	NA	False	NA	NA	False	GATAAA	-12	NA	10502550	10480018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ES.17414.21	chr19	-	710	5	FSM	ENSMUSG00000024668.9	ENSMUST00000235853.2	2025	5	17	1298	-17	-106	multi-exon	FALSE	canonical	2	8	junction_4	101.25802437338	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGCCTCCTGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	10502503	10480302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
ES.17414.22	chr19	-	3605	1	Intergenic	novelGene_14440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10486592	10482987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10483000_10486600
ES.17414.3	chr19	-	4435	16	Fusion	ENSMUSG00000035179.5_ENSMUSG00000024668.9	novel	1515	14	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_1	75.933713783068	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGTTCAGTCACTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	10502512	10451601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_10451693_10451853_10451933_10452294_10454487_10454568_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10459066_10459733_10461061_10461202_10473548_10473677_10494343_10494454_10494532_10494751_10502422
ES.17414.4	chr19	-	4078	19	Fusion	ENSMUSG00000035179.5_ENSMUSG00000024668.9	novel	1507	14	NA	NA	6	1	multi-exon	FALSE	canonical	0	0	junction_1	70.229430009834	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGTTCAGTCACTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	10502540	10451601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_10451689_10451853_10451933_10452294_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10459066_10459185_10459596_10459733_10460191_10460282_10461061_10463090_10463719_10463827_10494343_10494454_10494532_10494751_10502422
ES.17414.5	chr19	-	4072	13	NNC	ENSMUSG00000035179.5	novel	1507	14	NA	NA	-4319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.862006702732383	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGTTCAGTCACTG	NA	False	NA	NA	False	ATTAAA	-13	NA	10464611	10451602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10451689_10451853_10451933_10452294_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10461061_10463090_10463719
ES.17414.6	chr19	-	3617	12	NNC	ENSMUSG00000035179.5	novel	1507	14	NA	NA	-1381	0	intron_retention	FALSE	canonical	0	0	junction_1	0.890723542830247	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTGTTCAGTCACTG	636	False	NA	NA	False	ATTAAA	-13	NA	10461673	10451602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10451689_10451853_10451933_10452294_10452466_10454391_10454487_10454563_10454683_10454888_10454976_10455078_10455139_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10459185_10459596
ES.17414.7	chr19	-	4921	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-73	-1867	-6	1867	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGATGGCTCAGAGCAC	NA	False	NA	NA	False	NA	NA	NA	10502552	10476030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ES.17414.8	chr19	-	2970	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-84	-1889	6	79	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCTGTACTGGGCACAT	NA	False	NA	NA	False	NA	NA	NA	10502540	10477818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ES.17414.9	chr19	-	2859	5	NIC	ENSMUSG00000024668.9	novel	2025	5	NA	NA	-14	-102	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	77.3187396431163	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTGCTATGTAAACAGT	NA	False	NA	NA	False	ACTAAA	-20	NA	10502500	10477999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10480494_10494343_10494454_10494683_10494751_10498312_10498423_10502422
ES.17415.1	chr19	-	4638	2	Intergenic	novelGene_14442	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACATAGTCATGGCTGGA	776	False	NA	NA	False	NA	NA	NA	10524940	10519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10521907_10523053
ES.17415.2	chr19	-	3532	1	Intergenic	novelGene_14441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACATAGTCATGGCTGGA	3029	False	NA	NA	False	NA	NA	NA	10522687	10519155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10519200_10522700
ES.17416.1	chr19	-	1031	5	FSM	ENSMUSG00000024667.13	ENSMUST00000154383.2	927	5	-16	-88	-11	-1	multi-exon	FALSE	canonical	3	49	junction_4	15.1224171348366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGGTTGATTTTCTCC	NA	False	NA	-4	True	AATAAA	-16	NA	10533131	10527825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533076
ES.17416.2	chr19	-	1019	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	8	-28	-7	-3	multi-exon	FALSE	canonical	3	35	junction_4	20.6079474960511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCTGGTTGATTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	10533107	10527827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ES.17416.3	chr19	-	879	6	NIC	ENSMUSG00000024667.13	novel	876	6	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.4717403753266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGCTGGTTGATTTT	NA	False	NA	-8	True	AATAAA	-12	NA	10533107	10527829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10528184_10528321_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ES.17417.1	chr19	-	1526	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	3	0	3	0	multi-exon	FALSE	canonical	3	12	junction_4	65.3543227338483	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1788	False	NA	-4	True	AATAAA	-15	NA	10554448	10547841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ES.17417.10	chr19	-	4840	4	NIC	ENSMUSG00000024666.7	novel	1590	5	NA	NA	-25	-5	intron_retention	FALSE	canonical	3	102	junction_3	27.6445694888204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTTGGTGTCT	1485	False	NA	-11	True	AATAAA	-8	NA	10554751	10547848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548633_10548892_10552373_10552603_10552876_10554447
ES.17417.2	chr19	-	1357	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	233	0	-22	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1743	False	NA	-4	True	AATAAA	-15	NA	10554493	10547841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ES.17417.3	chr19	-	1614	4	NIC	ENSMUSG00000024666.7	novel	1260	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	27	junction_2	63.9739530329857	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1786	False	NA	-6	True	AATAAA	-13	NA	10554450	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548969_10552200_10552300_10552603_10552876_10554332
ES.17417.4	chr19	-	1160	4	NIC	ENSMUSG00000024666.7	novel	1260	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	68.6197250553124	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1766	False	NA	-6	True	AATAAA	-13	NA	10554470	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548633_10548892_10548969_10552603_10552876_10554447
ES.17417.5	chr19	-	1686	4	NIC	ENSMUSG00000024666.7	novel	1593	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	43	junction_3	54.7783412186483	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1787	False	NA	-6	True	AATAAA	-13	NA	10554449	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548969_10552200_10552373_10552603_10552876_10554332
ES.17417.6	chr19	-	1543	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	-283	0	-28	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1482	False	NA	-6	True	AATAAA	-13	NA	10554754	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
ES.17417.7	chr19	-	1548	4	NIC	ENSMUSG00000024666.7	novel	1260	5	NA	NA	-28	0	intron_retention	FALSE	canonical	3	27	junction_2	58.402815761647	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1737	False	NA	-6	True	AATAAA	-13	NA	10554499	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548969_10552200_10552300_10552603_10552876_10554447
ES.17417.8	chr19	-	1416	5	NIC	ENSMUSG00000024666.7	novel	1529	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	52.1464284491278	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1797	False	NA	-6	True	AATAAA	-13	NA	10554439	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554332
ES.17417.9	chr19	-	5074	2	NIC	ENSMUSG00000024666.7	novel	1593	4	NA	NA	-18	0	intron_retention	FALSE	canonical	3	102	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1747	False	NA	-6	True	AATAAA	-13	NA	10554489	10547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10552876_10554447
ES.17418.1	chr19	-	1897	1	Genic_Genomic	ENSMUSG00000034371.10	novel	NA	NA	NA	NA	15204	633	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAGCCACTATGCCTA	NA	False	NA	NA	False	NA	NA	NA	10566418	10564521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_10564500_10566400
ES.17418.2	chr19	-	3179	18	NIC	ENSMUSG00000034371.10	novel	2758	18	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_1	18.6012612587218	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTTTTTTTCCTTTTT	9787	False	NA	NA	False	AATAAA	-17	NA	10582750	10565155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10566211_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304
ES.17418.3	chr19	-	2470	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	-34	1	0	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGTCCCTGTTTAC	9755	False	NA	-24	True	AATAAA	-16	NA	10582782	10569561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ES.17418.4	chr19	-	2410	19	NNC	ENSMUSG00000034371.10	novel	2516	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	18.0428160184751	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGTCCCTGTTTAC	9741	False	NA	-24	True	AATAAA	-16	NA	10582796	10569561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582304_10582421_10582772
ES.17418.5	chr19	-	2458	17	NNC	ENSMUSG00000034371.10	novel	2253	17	NA	NA	1277	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.8962828752362	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	NA	False	NA	-25	True	AATAAA	-15	NA	10580345	10569562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10580050
ES.17418.6	chr19	-	2295	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	220	1	-2	-1	multi-exon	FALSE	canonical	3	13	junction_17	13.858404068355	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9739	False	NA	-25	True	AATAAA	-15	NA	10582798	10569562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
ES.17418.8	chr19	-	3475	14	NIC	ENSMUSG00000034371.10	novel	2758	18	NA	NA	0	-1	intron_retention	FALSE	canonical	3	13	junction_13	14.8511350750625	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTTTGTCCCTGTTTA	9741	False	NA	-25	True	AATAAA	-15	NA	10582796	10569562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10570601_10570689_10570724_10570827_10570932_10571033_10571933_10572066_10572187_10572657_10572775_10573375_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
ES.17419.1	chr19	+	156	1	Intergenic	novelGene_14443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATAATAATAAATA	NA	False	NA	NA	False	AATAAA	-43	NA	10658850	10659006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10658800_10659000
ES.1742.1	chr1	+	451	2	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTTGCAATTGT	8	True	NA	NA	False	AAAACA	-13	NA	161705514	161709156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161705621_161708811
ES.17420.1	chr19	+	2543	4	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.9893151415643	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	15	True	AATAAA	-18	NA	10666084	10691989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10666344_10683573_10683673_10688634_10688718_10689887
ES.17420.3	chr19	+	2699	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	-11	-2	5	1	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCCATGATGAGTT	NA	False	NA	18	True	AATAAA	-21	NA	10666103	10691992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ES.17420.4	chr19	+	2596	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	46.3923485070545	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTGTGGTGTCCATG	NA	False	NA	11	True	AATAAA	-14	NA	10666116	10691985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10666261_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ES.17420.5	chr19	+	7458	3	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	85	junction_1	23.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTGTGGTGTCCATG	NA	False	NA	11	True	AATAAA	-14	NA	10666127	10691985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10666344_10683573_10688718_10689887
ES.17420.6	chr19	+	6545	4	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	13	junction_1	50.8002624665136	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCTGTGGTGTCCAT	NA	False	NA	10	True	AATAAA	-13	NA	10666127	10691984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10666261_10683573_10687806_10688634_10688718_10689887
ES.17420.7	chr19	+	2479	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.7017896733453	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGGTGTCCATGATGA	NA	False	NA	15	True	AATAAA	-18	NA	10666150	10691989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10666174_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ES.17421.1	chr19	-	4002	7	NIC	ENSMUSG00000024670.18	novel	3032	13	NA	NA	8	0	intron_retention	TRUE	canonical	1	1	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCGTGTCTTGACAATT	8164	False	NA	NA	False	ATTAAA	-18	NA	10776100	10766704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10767608_10767932_10768035_10768279_10768818_10770191_10770309_10771505_10771602_10771927_10773753_10775679
ES.17421.2	chr19	-	1958	7	NIC	ENSMUSG00000024670.18	novel	2173	9	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1.34370962471642	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGGCGTGTCTTGAC	8159	False	NA	NA	False	ATTAAA	-14	NA	10776105	10766708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_10767608_10767932_10768035_10768279_10768535_10768745_10768818_10771927_10772069_10773689_10773753_10775679
ES.17422.1	chr19	-	181	1	Intergenic	novelGene_14444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATGGA	8391	False	NA	NA	False	NA	NA	NA	10821663	10821482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10821500_10821700
ES.17423.1	chr19	-	4795	10	NNC	ENSMUSG00000024736.16	novel	3895	10	NA	NA	-1	884	intron_retention	FALSE	canonical	2	11	junction_5	16.983652270476	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGTCAGCAGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	10847143	10834301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841028_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ES.17423.12	chr19	-	3711	10	NNC	ENSMUSG00000024736.16	novel	3895	10	NA	NA	57	-1	intron_retention	FALSE	canonical	0	0	junction_8	19.6776491620114	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATAGCTGGTACTGCTGT	NA	False	NA	-12	True	AATAAA	-14	NA	10847085	10835198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844419_10844509_10846902
ES.17423.2	chr19	-	3535	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	119	3	-43	-3	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCTGTGACACTCTCT	NA	False	NA	-2	True	AATAAA	-24	NA	10847185	10835188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ES.17423.3	chr19	-	3912	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	-12	-5	-12	5	multi-exon	FALSE	canonical	3	39	junction_7	10.088497300281	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTACTGCTGTGACACT	NA	False	NA	-6	True	AATAAA	-20	NA	10847154	10835192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ES.17423.4	chr19	-	3768	11	NNC	ENSMUSG00000024736.16	novel	3657	11	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9021162836334	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGTACTGCTGTGACA	NA	False	NA	-8	True	AATAAA	-18	NA	10847153	10835194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10836787_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ES.17423.6	chr19	-	3353	11	NNC	ENSMUSG00000024736.16	novel	3657	11	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	21.733844574764	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGGTACTGCTGTGAC	NA	False	NA	-9	True	AATAAA	-17	NA	10847122	10835195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10836516_10836927_10837120_10837595_10837758_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ES.17423.7	chr19	-	6187	9	NNC	ENSMUSG00000024736.16	novel	3895	10	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_6	19.9248588451713	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGGTACTGCTGTGA	NA	False	NA	-10	True	AATAAA	-16	NA	10847153	10835196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10837120_10837487_10837762_10838893_10840731_10840828_10841025_10841318_10841469_10842619_10843400_10843490_10844052_10844293_10844509_10846902
ES.17424.1	chr19	-	1950	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	241	-3	-29	3	multi-exon	TRUE	canonical	3	149	junction_2	8.28653526310404	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGACAAACTCTCTTC	NA	False	NA	0	True	AATAAA	-20	NA	10859124	10848020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ES.17424.2	chr19	-	1685	5	NNC	ENSMUSG00000034659.15	novel	2188	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.7913512005688	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTGCTGACAAACT	NA	False	NA	-6	True	AATAAA	-14	NA	10859095	10848026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10848602_10848831_10849514_10849950_10850054_10851605_10851851_10859015
ES.17424.3	chr19	-	3874	2	FSM	ENSMUSG00000034659.15	ENSMUST00000129052.2	619	2	9	-3264	-4	-4	multi-exon	FALSE	canonical	3	169	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTCTGCTGACAAAC	NA	False	NA	-7	True	AATAAA	-13	NA	10859066	10848027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10851851_10859015
ES.17424.4	chr19	-	2058	4	FSM	ENSMUSG00000034659.15	ENSMUST00000133303.8	839	4	-33	-1186	-33	-4	multi-exon	FALSE	canonical	1	1	junction_3	71.4749373323731	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTCTGCTGACAAAC	NA	False	NA	-7	True	AATAAA	-13	NA	10857767	10848027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10857543
ES.17425.1	chr19	-	167	1	Intergenic	novelGene_14445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTTTTACATCTCTG	9884	False	NA	NA	False	NA	NA	NA	10859893	10859726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_10859700_10859900
ES.17426.1	chr19	+	180	1	Intergenic	novelGene_14446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTTTTTTTATAAT	1887	False	NA	NA	False	NA	NA	NA	10861779	10861959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10861800_10862000
ES.17427.1	chr19	+	182	1	Intergenic	novelGene_14447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGGGAAAAAAAGAA	3259	False	NA	NA	False	NA	NA	NA	10863151	10863333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10863200_10863300
ES.17428.1	chr19	+	156	1	Intergenic	novelGene_14448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAACAAAAAAAAAA	4868	False	NA	NA	False	NA	NA	NA	10864760	10864916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10864800_10864900
ES.17429.1	chr19	+	169	1	Intergenic	novelGene_14449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAACAACAAAGA	5069	False	NA	NA	False	NA	NA	NA	10864961	10865130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10865000_10865100
ES.1743.1	chr1	-	176	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161717247	161717071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161717100_161717200
ES.17430.1	chr19	+	2182	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	-51	3	-51	-3	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTCAGCTTCTTGTGT	NA	False	NA	12	True	ATTAAA	-18	NA	10872543	10882893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ES.17430.2	chr19	+	2217	16	NNC	ENSMUSG00000024735.14	novel	6035	16	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	50.0078216104463	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTCAGCTTCTTGTGT	NA	False	NA	12	True	ATTAAA	-18	NA	10872563	10882893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877689_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ES.17430.4	chr19	+	2158	15	NIC	ENSMUSG00000024735.14	novel	2134	16	NA	NA	2	-3	intron_retention	FALSE	canonical	3	125	junction_5	13.6471571383634	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTCAGCTTCTTGTGT	NA	False	NA	12	True	ATTAAA	-18	NA	10872647	10882893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ES.17430.5	chr19	+	2184	15	NIC	ENSMUSG00000024735.14	novel	2134	16	NA	NA	2	-4	intron_retention	FALSE	canonical	3	125	junction_6	14.1817646638065	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGTCAGCTTCTTGTG	NA	False	NA	11	True	ATTAAA	-17	NA	10872647	10882892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ES.17430.6	chr19	+	2260	15	NIC	ENSMUSG00000024735.14	novel	2134	16	NA	NA	2	3	intron_retention	FALSE	canonical	3	125	junction_6	10.8046191935842	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCTACACAGT	NA	False	NA	-8	True	NA	NA	NA	10872647	10882873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ES.17430.7	chr19	+	2335	14	NIC	ENSMUSG00000024735.14	novel	2134	16	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	125	junction_6	10.8202090126265	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTCAGCTTCTTGTGT	NA	False	NA	12	True	ATTAAA	-18	NA	10872768	10882893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10880136_10880331_10880418_10880654_10881108_10882398
ES.17431.1	chr19	+	2679	1	ISM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	11466	1	6598	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTGTGGTATGTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	10884243	10886922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_10884200_10886900
ES.17432.1	chr19	+	5671	1	Genic_Genomic	ENSMUSG00000034117.4	novel	NA	NA	NA	NA	3563	3882	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTCTGGTCTCTCTCC	NA	False	NA	NA	False	AATAAA	-27	NA	10918086	10923757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_10918100_10923800
ES.17432.2	chr19	+	5890	1	Antisense	novelGene_ENSMUSG00000024732.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCGGAACTGTCGG	NA	False	NA	NA	False	NA	NA	NA	10920725	10926615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_10920700_10926600
ES.17433.1	chr19	-	1644	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	2	11726	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	114.6799895361	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCCTTACTCAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	10926628	10907118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10907127_10920209_10920654_10920841_10920917_10922646_10922777_10925641
ES.17433.2	chr19	-	2998	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-2	7	-2	-7	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCAATTCACCTTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	10926632	10918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ES.17433.4	chr19	-	2010	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	-40	-913	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	114.6799895361	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGGTGTGACAGGTA	NA	False	NA	NA	False	AATAAA	-7	NA	10926670	10919757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641_10926169_10926288
ES.17433.5	chr19	-	1784	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-7	1226	-7	-1226	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCAGTACCTCCATTT	NA	False	NA	-2	True	NA	NA	NA	10926637	10920070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ES.17433.6	chr19	-	1694	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	-38	1347	-38	-1347	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATCAAAA	NA	False	NA	-123	True	NA	NA	NA	10926668	10920191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ES.17433.7	chr19	-	1543	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	-9	-1349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.6799895361	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAAAAATCAA	NA	False	NA	-125	True	NA	NA	NA	10926639	10920193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641_10926169_10926288
ES.17433.8	chr19	-	1512	5	NNC	ENSMUSG00000024732.8	novel	3003	4	NA	NA	2	-1349	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	128.330384165247	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAAAAATCAA	NA	False	NA	-125	True	NA	NA	NA	10926628	10920193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_10920654_10920841_10920897_10922646_10922777_10925641_10926169_10926288
ES.17434.1	chr19	+	172	1	Intergenic	novelGene_14450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	2449	False	NA	NA	False	NA	NA	NA	10954818	10954990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_10954800_10955000
ES.17435.1	chr19	-	151	1	Intergenic	novelGene_14451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	11116454	11116303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_11116300_11116500
ES.17436.1	chr19	+	929	3	NNC	ENSMUSG00000097091.2	novel	1022	3	NA	NA	95646	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACTAGTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	11269826	11277247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11269885_11270003_11270177_11276549
ES.17436.2	chr19	+	4194	1	NIC	ENSMUSG00000097091.2	novel	1022	3	NA	NA	98876	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGTTGTTTTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	11273056	11277250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11273100_11277200
ES.17437.1	chr19	+	6647	1	Genic_Genomic	ENSMUSG00000024683.7	novel	NA	NA	NA	NA	-2077	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	NA	False	NA	NA	False	NA	NA	NA	11745677	11752324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_11745700_11752300
ES.17437.10	chr19	+	4254	2	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	39	0	18	0	intron_retention	FALSE	canonical	3	356	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	200	False	NA	NA	False	NA	NA	NA	11747793	11752324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11747889_11748165
ES.17437.11	chr19	+	4067	2	ISM	ENSMUSG00000024683.7	ENSMUST00000237728.2	2981	3	45	-7	45	7	intron_retention	FALSE	canonical	3	356	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAACTTCTCTTTGGTCA	227	False	NA	32	True	ATTAAA	-20	NA	11747820	11752164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11747889_11748165
ES.17437.12	chr19	+	2067	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	73	-978	52	978	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTACCTTAAAGAGTTA	234	False	NA	NA	False	AATAAA	-14	NA	11747827	11753302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ES.17437.2	chr19	+	175	1	Intergenic	novelGene_14452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAATTATAAAAG	NA	False	NA	NA	False	NA	NA	NA	11747111	11747286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11747100_11747300
ES.17437.3	chr19	+	2714	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-34	-1518	-34	1518	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTTGTGAGTTTCC	127	False	NA	4	True	AATAAA	-13	NA	11747720	11753842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ES.17437.4	chr19	+	1031	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-27	158	-27	9	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTCTCTTTGGTCAGT	134	False	NA	34	True	ATTAAA	-22	NA	11747727	11752166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ES.17437.5	chr19	+	1166	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	-20	16	-20	-16	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTG	141	False	NA	NA	False	NA	NA	NA	11747734	11752308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ES.17437.6	chr19	+	3162	3	FSM	ENSMUSG00000024683.7	ENSMUST00000237728.2	2981	3	-14	-167	7	0	multi-exon	FALSE	canonical	3	302	junction_2	27	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	168	False	NA	NA	False	NA	NA	NA	11747761	11752324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11750388_11751511
ES.17437.7	chr19	+	349	3	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	19	1918	-2	-1751	5prime_fragment	FALSE	canonical	3	320	junction_2	18	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTTTCTTCTCTTT	180	False	NA	NA	False	GATAAA	-8	NA	11747773	11750406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11747889_11748165_11748232_11750238
ES.17437.8	chr19	+	1853	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	37	-728	16	728	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGGGTCATAGTATAA	198	False	NA	NA	False	NA	NA	NA	11747791	11753052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ES.17437.9	chr19	+	2969	3	FSM	ENSMUSG00000024683.7	ENSMUST00000237728.2	2981	3	16	-4	16	4	multi-exon	FALSE	canonical	3	302	junction_2	27	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTACAACTTCTCTTTGG	198	False	NA	29	True	ATTAAA	-17	NA	11747791	11752161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11747889_11748165_11750388_11751511
ES.17438.1	chr19	+	2957	1	Intergenic	novelGene_14453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTTTCTTAAAGATTTC	NA	False	NA	NA	False	NA	NA	NA	11790042	11792999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11790000_11793000
ES.17438.2	chr19	+	970	1	Intergenic	novelGene_14454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAACTTACTTAGTTGC	NA	False	NA	NA	False	NA	NA	NA	11790043	11791013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11790000_11791000
ES.17439.1	chr19	+	4427	1	Antisense	novelGene_ENSMUSG00000041488.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTCAGAGCTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	11794061	11798488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_11794100_11798500
ES.1744.1	chr1	+	1319	2	NNC	ENSMUSG00000026698.9	novel	3290	2	NA	NA	-17	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796779	161799192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_161796849_161797942
ES.1744.2	chr1	+	1432	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	46	1812	4	-707	multi-exon	FALSE	canonical	3	13	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796800	161799192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_161796849_161797808
ES.1744.3	chr1	+	2329	1	FSM	ENSMUSG00000026698.9	ENSMUST00000193784.2	4207	1	67	1811	-4	-707	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796863	161799192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_161796900_161799200
ES.17440.1	chr19	-	6455	6	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	3041	19	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	182.384867793356	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTTTTTATCCTTGA	NA	False	NA	0	True	AATAAA	-38	NA	11763940	11752462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11753953_11754451_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888
ES.17440.10	chr19	-	2559	11	NIC	ENSMUSG00000041488.17	novel	1018	11	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	221.076479979214	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTTGTTGGGTACTAGT	7149	False	NA	-23	True	AATAAA	-15	NA	11796294	11752485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
ES.17440.11	chr19	-	2697	12	NNC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	238	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	208.957625503829	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTTGTTGGGTACTAGT	7596	False	NA	-23	True	AATAAA	-15	NA	11795847	11752485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11795570
ES.17440.12	chr19	-	2811	11	NIC	ENSMUSG00000041488.17	novel	870	11	NA	NA	-6	-320	intron_retention	FALSE	canonical	3	18	junction_1	153.6	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTTAACTTACTTGA	7180	False	NA	NA	False	AATAAA	-27	NA	11796263	11752801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.13	chr19	-	2355	12	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	-11	-331	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	185.459046291195	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTGAAAGTAAGTGTT	7126	False	NA	NA	False	AATAAA	-16	NA	11796317	11752812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.14	chr19	-	4492	10	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	18	0	intron_retention	TRUE	canonical	0	0	junction_5	166.174458378187	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGGCCATCTCTCTG	7155	False	NA	-8	True	AATAAA	-25	NA	11796288	11754848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763503_11763888_11763998_11765532_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.15	chr19	-	2853	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	-45	2	-45	-2	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7092	False	NA	-10	True	AATAAA	-23	NA	11796351	11754850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.16	chr19	-	4066	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	392	junction_4	59.7329447738685	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7224	False	NA	-10	True	AATAAA	-23	NA	11796219	11754850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.17	chr19	-	2719	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	163.137978410914	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7126	False	NA	-10	True	AATAAA	-23	NA	11796317	11754850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
ES.17440.18	chr19	-	3264	11	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	12	junction_8	155.821853409591	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7143	False	NA	-10	True	AATAAA	-23	NA	11796300	11754850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11767458_11769109_11769210_11780857_11780942_11796055
ES.17440.2	chr19	-	5174	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	21	-2385	21	18	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTTTTTATCCTTG	7158	False	NA	-1	True	AATAAA	-37	NA	11796285	11752463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.20	chr19	-	5171	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	392	junction_4	61.8949727709851	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGGGGCCATCTCTC	7167	False	NA	-10	True	AATAAA	-23	NA	11796276	11754850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.21	chr19	-	2832	12	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	18	-6	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	195.403206788273	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTCTGGGGCCATC	7155	False	NA	-14	True	AATAAA	-19	NA	11796288	11754854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11767411_11767458_11769109_11769210_11780857_11780942_11796055
ES.17440.22	chr19	-	2657	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-16	-6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	162.062021354271	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTCTGGGGCCATC	7170	False	NA	-14	True	AATAAA	-19	NA	11796273	11754854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.23	chr19	-	2504	8	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-26	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	220.512020126813	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACAGCTCTGGGGCCAT	7111	False	NA	-15	True	AATAAA	-18	NA	11796332	11754855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
ES.17440.24	chr19	-	2116	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	-89	783	-89	-783	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7048	False	NA	NA	False	NA	NA	NA	11796395	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.26	chr19	-	9274	7	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	17	-783	intron_retention	FALSE	non_canonical	0	0	junction_1	198.308681941395	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7154	False	NA	NA	False	NA	NA	NA	11796289	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758625_11758719_11760501_11762753_11762889_11763048_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.27	chr19	-	2162	13	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	17	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	234.090126874245	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7154	False	NA	NA	False	NA	NA	NA	11796289	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11767403_11767458_11769109_11769210_11778339_11778438_11780857_11780942_11796055
ES.17440.28	chr19	-	3364	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	8	-783	intron_retention	FALSE	canonical	3	392	junction_4	59.7329447738685	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7145	False	NA	NA	False	NA	NA	NA	11796298	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.29	chr19	-	1984	11	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-12	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	155.903944786526	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7174	False	NA	NA	False	NA	NA	NA	11796269	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769204_11780857_11780942_11796055
ES.17440.3	chr19	-	2932	13	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	12	13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	181.891202981954	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTACTGTTGTTTTTAT	7149	False	NA	-6	True	AATAAA	-32	NA	11796294	11752468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11753953_11754451_11754535_11756281_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.30	chr19	-	2242	11	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	11	-783	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	156.021440834265	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7148	False	NA	NA	False	NA	NA	NA	11796295	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760163_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.31	chr19	-	2083	12	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-10	-783	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	195.403206788273	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7127	False	NA	NA	False	NA	NA	NA	11796316	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11767411_11767458_11769109_11769210_11780857_11780942_11796055
ES.17440.32	chr19	-	5666	10	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	270	-783	intron_retention	FALSE	non_canonical	0	0	junction_1	201.1897943071	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7628	False	NA	NA	False	NA	NA	NA	11795815	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758639_11758731_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11795570
ES.17440.33	chr19	-	1900	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	13	-783	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	162.062021354271	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7150	False	NA	NA	False	NA	NA	NA	11796293	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.34	chr19	-	1937	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-10	-783	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	163.137978410914	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7127	False	NA	NA	False	NA	NA	NA	11796316	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
ES.17440.35	chr19	-	4366	12	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	108	-783	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.519535596226	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	6784	False	NA	NA	False	NA	NA	NA	11796659	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758625_11758719_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055_11796147_11796458
ES.17440.37	chr19	-	3422	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-75	-783	intron_retention	FALSE	canonical	3	392	junction_5	55.5637771694234	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7062	False	NA	NA	False	NA	NA	NA	11796381	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.38	chr19	-	5659	10	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	11	-783	intron_retention	FALSE	non_canonical	0	0	junction_1	163.816368135592	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7148	False	NA	NA	False	NA	NA	NA	11796295	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758625_11758719_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.39	chr19	-	5689	10	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-17	-783	intron_retention	FALSE	non_canonical	0	0	junction_1	163.816368135592	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7120	False	NA	NA	False	NA	NA	NA	11796323	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758635_11758727_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.4	chr19	-	2723	12	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	-49	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	185.459046291195	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7088	False	NA	-20	True	AATAAA	-18	NA	11796355	11752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.41	chr19	-	1975	11	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-6	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.181060431196	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7180	False	NA	NA	False	NA	NA	NA	11796263	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766987_11769109_11769210_11780857_11780942_11796055
ES.17440.43	chr19	-	5575	10	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-622	-783	intron_retention	FALSE	non_canonical	0	0	junction_1	201.1897943071	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	6054	False	NA	NA	False	NA	NA	NA	11797389	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758639_11758731_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11797235
ES.17440.44	chr19	-	4402	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	18	-783	intron_retention	FALSE	canonical	3	392	junction_4	61.8949727709851	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7155	False	NA	NA	False	NA	NA	NA	11796288	11755631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.45	chr19	-	6321	9	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	2	-804	intron_retention	FALSE	non_canonical	0	0	junction_1	173.122743667607	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7231	False	NA	NA	False	NA	NA	NA	11796212	11755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758625_11758719_11760501_11762753_11762889_11763048_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.47	chr19	-	4292	11	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	18	-804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.603278654636	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7155	False	NA	NA	False	NA	NA	NA	11796288	11755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758631_11758719_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.48	chr19	-	3170	9	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-8	-805	intron_retention	FALSE	canonical	3	6	junction_1	171.743267699203	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	7178	False	NA	NA	False	NA	NA	NA	11796265	11755653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.5	chr19	-	3162	11	NIC	ENSMUSG00000041488.17	novel	870	11	NA	NA	11	-1	intron_retention	FALSE	canonical	3	18	junction_1	153.6	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7148	False	NA	-20	True	AATAAA	-18	NA	11796295	11752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.50	chr19	-	5516	9	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	-18	-806	intron_retention	FALSE	non_canonical	0	0	junction_1	216.102406279986	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	7168	False	NA	NA	False	NA	NA	NA	11796275	11755654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11758625_11758719_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
ES.17440.51	chr19	-	2455	11	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	11	-806	intron_retention	FALSE	canonical	3	12	junction_8	155.821853409591	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	7148	False	NA	NA	False	NA	NA	NA	11796295	11755654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11767458_11769109_11769210_11780857_11780942_11796055
ES.17440.52	chr19	-	2074	11	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	12	-806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	158.803778292583	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	7149	False	NA	NA	False	NA	NA	NA	11796294	11755654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766838_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.56	chr19	-	1665	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	-41	1186	-41	-1186	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGCTTATTTGAAATT	7096	False	NA	NA	False	AATAGA	-18	NA	11796347	11756034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.6	chr19	-	8926	10	NIC	ENSMUSG00000041488.17	novel	870	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	6	junction_6	208.697784923795	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7171	False	NA	-20	True	AATAAA	-18	NA	11796272	11752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11767411_11767458_11769109_11769210_11780857_11780942_11796055
ES.17440.7	chr19	-	4659	12	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	188.742773929875	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7149	False	NA	-20	True	AATAAA	-18	NA	11796294	11752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11753953_11754451_11756532_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.8	chr19	-	2542	11	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	192.742937613807	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGGGTACTAGTTGT	7155	False	NA	-20	True	AATAAA	-18	NA	11796288	11752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_11753953_11754451_11754535_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17440.9	chr19	-	2872	13	NNC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.268327077294	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTGGGTACTAGTTG	7186	False	NA	-21	True	AATAAA	-17	NA	11796257	11752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_11753953_11754451_11754535_11756289_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ES.17441.1	chr19	+	183	1	Intergenic	novelGene_14455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	11866557	11866740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11866600_11866700
ES.17442.1	chr19	+	4194	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	-97	119	-97	-119	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTATACCTTTCTGT	NA	False	NA	9	True	AATAAA	-23	NA	11889665	11922336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.11	chr19	+	3958	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	35	223	-9	-223	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTATTGTGCTTTTTGT	NA	False	NA	-95	True	AGTAAA	-19	NA	11889797	11922232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.12	chr19	+	4138	20	NNC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	-8	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	122.283785105479	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11889798	11922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11906470_11906540_11907238_11907420_11908896_11909021_11909501_11909600_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.13	chr19	+	4414	18	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	37	121	-7	-121	intron_retention	FALSE	canonical	3	210	junction_1	28.6387836822	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889799	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188
ES.17442.14	chr19	+	4003	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	-7	-121	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	69.1430124657547	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889799	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917102_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.16	chr19	+	4487	19	ISM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	-6	-967	-6	-121	intron_retention	FALSE	canonical	3	28	junction_5	83.8200784750024	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889800	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188
ES.17442.19	chr19	+	3002	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	44	1170	0	-82	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCTGTTCCATCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	11889806	11921285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.2	chr19	+	4294	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	-44	-1092	0	4	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTCCATCTCTTTTT	NA	False	NA	25	True	AATAAA	-15	NA	11889762	11922459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.20	chr19	+	3939	19	NIC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	1	-125	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	101.275339764646	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11889807	11922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.21	chr19	+	4047	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	1	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.7059299246963	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889807	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920089_11920195_11920339_11920694
ES.17442.22	chr19	+	3972	18	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.9580918540584	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATGTCCATCTCTTTT	NA	False	NA	24	True	AATAAA	-14	NA	11889807	11922458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900803_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.23	chr19	+	4032	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	5	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.7162680060498	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889811	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897555_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.24	chr19	+	3857	18	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	8	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.2547248440716	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889814	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11908896_11909021_11909506_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.25	chr19	+	3976	18	NIC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	9	-127	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	71.6701884813694	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTGTGCTTTATAC	NA	False	NA	1	True	AATAAA	-15	NA	11889815	11922328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.27	chr19	+	3978	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	17	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.7162680060498	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889823	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891802_11897575_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.28	chr19	+	3829	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	22	-693	22	-395	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTCTTTGTACTCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	11889828	11922060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.29	chr19	+	4065	20	NNC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	29	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.8220771312165	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11889835	11922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11894705_11894753_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.3	chr19	+	3819	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	5	392	5	-392	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTTTGTACTCATCTC	NA	False	NA	NA	False	AGTAAA	-18	NA	11889767	11922063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.30	chr19	+	4494	19	NIC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	34	-127	intron_retention	FALSE	canonical	3	28	junction_4	83.6215017537688	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTGTGCTTTATAC	NA	False	NA	1	True	AATAAA	-15	NA	11889840	11922328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11889942_11891711_11891824_11897541_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.32	chr19	+	3742	15	NIC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	98	-5280	intron_retention	FALSE	canonical	3	28	junction_4	94.0644590107209	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11889904	11916087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11889942_11891711_11891824_11897541_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583
ES.17442.33	chr19	+	5716	19	ISM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	179	-967	179	-121	3prime_fragment	FALSE	canonical	3	28	junction_4	83.3967906538257	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889985	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.34	chr19	+	4249	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	215	-121	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	67.446480840573	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11890021	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11890355_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.35	chr19	+	4044	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	219	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5286278828503	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATGTGTGCTTTATA	NA	False	NA	0	True	AATAAA	-14	NA	11890025	11922327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11890161_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.36	chr19	+	5636	19	ISM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	386	-1094	386	6	3prime_fragment	FALSE	canonical	3	28	junction_4	83.3967906538257	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCATCTCTTTTTGC	NA	False	NA	27	True	AATAAA	-17	NA	11890192	11922461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.37	chr19	+	4185	20	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	752	-121	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	98.698679641021	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11890558	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11890754_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.38	chr19	+	4498	18	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	1363	125	1319	-125	3prime_fragment	FALSE	canonical	3	247	junction_7	22.9102355451349	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11891125	11922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.39	chr19	+	3113	13	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	7795	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	79.22239266773	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11897601	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11908948_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.4	chr19	+	4212	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	12	-8	12	8	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTCTTTTTGCTT	NA	False	NA	29	True	AATAAA	-19	NA	11889774	11922463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.40	chr19	+	3432	14	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	10067	0	10023	0	3prime_fragment	FALSE	canonical	3	247	junction_3	24.2015697080037	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGATGTCCATCTCT	NA	False	NA	21	True	AATAAA	-11	NA	11899829	11922455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.41	chr19	+	212	1	Intergenic	novelGene_14457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATTCTAAGT	NA	False	NA	NA	False	AATAAA	-10	NA	11900122	11900334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11900100_11900300
ES.17442.42	chr19	+	3117	12	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	11399	125	11355	-125	3prime_fragment	FALSE	canonical	3	247	junction_1	18.7779543680331	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGCTTTATACCT	NA	False	NA	3	True	AATAAA	-17	NA	11901161	11922330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.43	chr19	+	742	1	NIC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	17402	-13417	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTCATTAATTCAAATT	NA	False	NA	NA	False	NA	NA	NA	11907208	11907950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11907200_11908000
ES.17442.44	chr19	+	180	1	Intergenic	novelGene_14458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	816	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAATAATTA	2071	False	NA	7	True	NA	NA	NA	11915200	11915380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11915200_11915400
ES.17442.6	chr19	+	4060	20	NNC	ENSMUSG00000046139.9	novel	3158	20	NA	NA	-21	-121	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_15	97.9338631487931	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889785	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914669_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.7	chr19	+	4144	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	-19	-967	-19	-121	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889787	11922334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.8	chr19	+	3662	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	27	527	-17	-527	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCTTCCTGATCCTACT	NA	False	NA	NA	False	AATAAA	-16	NA	11889789	11921928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17442.9	chr19	+	4052	19	NNC	ENSMUSG00000046139.9	novel	4216	19	NA	NA	-17	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.7162680060498	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATGTGTGCTTTATA	NA	False	NA	0	True	AATAAA	-14	NA	11889789	11922327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11889942_11891711_11891815_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ES.17443.1	chr19	-	176	1	Intergenic	novelGene_14456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAAGAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	11895935	11895759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_11895800_11895900
ES.17444.1	chr19	-	6153	2	Antisense	novelGene_ENSMUSG00000046139.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTCAGTAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	11917395	11911026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_11915894_11916109
ES.17444.2	chr19	-	4213	3	Antisense	novelGene_ENSMUSG00000046139.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTCAGTAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	11917395	11911026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_11911103_11913042_11915895_11916110
ES.17445.1	chr19	+	174	1	Intergenic	novelGene_14459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGGGGAAAAAAACAA	2483	False	NA	NA	False	NA	NA	NA	11926435	11926609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11926400_11926600
ES.17446.1	chr19	+	307	1	Intergenic	novelGene_14460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11936939	11937246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11936900_11937200
ES.17446.2	chr19	+	167	1	Intergenic	novelGene_14461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCATGGTGGCACATG	NA	False	NA	NA	False	NA	NA	NA	11936944	11937111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11936900_11937100
ES.17447.1	chr19	+	4753	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-263	-2	-263	2	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGATTTGCTTCTA	NA	False	NA	11	True	ATTAAA	-18	NA	11943041	11971478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.10	chr19	+	1168	5	ISM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-106	15829	-106	-15829	5prime_fragment	FALSE	canonical	3	144	junction_3	10.356157588604	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTTTTGATGCACC	NA	False	NA	NA	False	NA	NA	NA	11943198	11955647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600
ES.17447.12	chr19	+	2362	9	ISM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-106	9016	-106	-9016	5prime_fragment	FALSE	canonical	3	144	junction_3	15.858258889298	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTACAAGATTAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	11943198	11962460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755
ES.17447.13	chr19	+	4551	15	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-106	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1512763396788	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGATTTGCTTCTA	NA	False	NA	11	True	ATTAAA	-18	NA	11943198	11971478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943462_11943506_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.14	chr19	+	4561	14	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-104	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.7659411798573	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTGATTTGCTTCTA	NA	False	NA	11	True	ATTAAA	-18	NA	11943200	11971478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961300_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.18	chr19	+	4369	14	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-94	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.6957605018799	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTGATTTGCTTCT	NA	False	NA	10	True	ATTAAA	-17	NA	11943210	11971477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943309_11943426_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11967964_11968147_11968958_11969180_11969263
ES.17447.19	chr19	+	4449	13	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-89	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	45.5152599562926	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTATATTGTCTGAT	NA	False	NA	2	True	ATTAAA	-9	NA	11943215	11971469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.2	chr19	+	3739	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-241	990	-241	-990	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTCCCTGGGACTCT	NA	False	NA	NA	False	NA	NA	NA	11943063	11970486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.20	chr19	+	4082	11	ISM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	10461	990	10461	-990	3prime_fragment	FALSE	canonical	3	144	junction_4	14.6632192918199	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTCCCTGGGACTCT	NA	False	NA	NA	False	NA	NA	NA	11953765	11970486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.21	chr19	+	4692	1	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	10465	-13015	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGAGTGAGCATATAT	NA	False	NA	NA	False	NA	NA	NA	11953769	11958461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11953800_11958500
ES.17447.22	chr19	+	6368	2	ISM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	12530	9091	12530	-9091	intron_retention	FALSE	canonical	3	194	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11955834	11962385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11956050_11956232
ES.17447.23	chr19	+	6370	3	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	19683	-7	intron_retention	FALSE	canonical	3	163	junction_1	7.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTATATTGTCTGAT	4348	False	NA	2	True	ATTAAA	-9	NA	11962987	11971469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11966665_11967964_11968147_11968958
ES.17447.3	chr19	+	8745	12	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-135	-7	intron_retention	FALSE	canonical	3	144	junction_5	14.9329078058224	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTATATTGTCTGAT	NA	False	NA	2	True	ATTAAA	-9	NA	11943169	11971469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11943661_11948050_11948260_11951021_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.4	chr19	+	5417	13	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-117	0	intron_retention	FALSE	canonical	3	144	junction_3	15.3267648974669	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTCTGATTTGCTTC	NA	False	NA	9	True	ATTAAA	-16	NA	11943187	11971476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11969180_11969263
ES.17447.5	chr19	+	5238	10	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-116	-5896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	52.6472069065561	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCTTTAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	11943188	11965580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11962208_11962461
ES.17447.6	chr19	+	4545	15	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1512763396788	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTCTGATTTGCTTC	NA	False	NA	9	True	ATTAAA	-16	NA	11943189	11971476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943418_11943475_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.7	chr19	+	4492	13	NNC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-114	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	61.4328902136307	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTGATTTGCTTCT	NA	False	NA	10	True	ATTAAA	-17	NA	11943190	11971477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11965712_11965827_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17447.8	chr19	+	5490	12	ISM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	-106	0	-106	0	intron_retention	FALSE	canonical	3	144	junction_3	15.8521057338874	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTCTGATTTGCTTC	NA	False	NA	9	True	ATTAAA	-16	NA	11943198	11971476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964
ES.17447.9	chr19	+	8488	13	NIC	ENSMUSG00000024687.12	novel	4488	14	NA	NA	-106	1	intron_retention	FALSE	canonical	3	144	junction_6	14.3069039278245	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTGATTTGCTTCT	NA	False	NA	10	True	ATTAAA	-17	NA	11943198	11971477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_11943661_11948050_11948260_11951021_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ES.17448.1	chr19	+	108	1	Intergenic	novelGene_14462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGTGTAATTCCCCCC	NA	False	NA	NA	False	ATTAAA	-4	NA	11989622	11989730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11989600_11989700
ES.17449.1	chr19	+	2175	4	Intergenic	novelGene_14463	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTTGGTGGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	11989783	11995133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_11989812_11991607_11991882_11992927_11994409_11994741
ES.1745.1	chr1	+	222	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACATGAAGATAAGAATG	NA	False	NA	NA	False	NA	NA	NA	161908754	161908976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_161908800_161909000
ES.17450.1	chr19	-	181	1	Intergenic	novelGene_14464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAGCTCCTCGTACT	NA	False	NA	NA	False	NA	NA	NA	12083597	12083416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_12083400_12083600
ES.17451.1	chr19	+	172	1	NIC	ENSMUSG00000050815.7	novel	2131	4	NA	NA	-521	-1437	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	12399107	12399279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_12399100_12399300
ES.17452.1	chr19	+	4084	3	NNC	ENSMUSG00000046805.11	novel	4334	2	NA	NA	51	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTTGGTGTTCATCT	1793	False	NA	NA	False	ATTAAA	-18	NA	12438193	12442644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_12438226_12438514_12442399_12442476
ES.17453.1	chr19	-	343	3	NNC	ENSMUSG00000039982.9	novel	5226	9	NA	NA	33878	44199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTATCATATTTATCTG	NA	False	NA	NA	False	NA	NA	NA	12444940	12399502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12399679_12404885_12404972_12444859
ES.17453.2	chr19	-	4829	9	NNC	ENSMUSG00000039982.9	novel	5226	9	NA	NA	-691	9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	5.29002599237471	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGTTACTCCTAAGGGC	7541	False	NA	NA	False	AATAAA	-22	NA	12479509	12443692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12479467
ES.17453.3	chr19	-	5911	9	FSM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-676	-9	-676	9	multi-exon	TRUE	canonical	3	5	junction_1	4.63680924774785	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGTTACTCCTAAGGGC	7556	False	NA	NA	False	AATAAA	-22	NA	12479494	12443692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12478370
ES.17453.5	chr19	-	2718	9	NNC	ENSMUSG00000039982.9	novel	5226	9	NA	NA	-691	-2102	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	5.29002599237471	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGGGAAGATGTCTTG	7541	False	NA	NA	False	AATAAA	-26	NA	12479509	12445803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12479467
ES.17453.6	chr19	-	3734	2	NNC	ENSMUSG00000039982.9	novel	5226	9	NA	NA	-691	-22521	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCTCAGCTGTTTATC	7541	False	NA	NA	False	AATAAA	-26	NA	12479509	12466222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12469915_12479467
ES.17453.7	chr19	-	4816	2	ISM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-681	22526	-681	-22526	5prime_fragment	FALSE	canonical	3	10	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACAAGGCTCAGCTGT	7551	False	NA	NA	False	AATAAA	-21	NA	12479499	12466227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_12469915_12478370
ES.17454.1	chr19	+	160	1	Intergenic	novelGene_14465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	12496750	12496910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_12496800_12496900
ES.17455.1	chr19	-	174	1	Intergenic	novelGene_14466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAGAGGAA	8603	False	NA	NA	False	NA	NA	NA	12532220	12532046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_12532000_12532200
ES.17456.1	chr19	+	3403	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	-130	-6	-130	0	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTAGTTATTTATTTT	NA	False	NA	10	True	AATAAA	-19	NA	12550756	12567132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
ES.17456.2	chr19	+	3201	3	NIC	ENSMUSG00000024691.14	novel	3267	4	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTAGTTATTTATT	NA	False	NA	8	True	AATAAA	-17	NA	12550875	12567130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_12550945_12561286_12561487_12564198
ES.17456.3	chr19	+	2991	3	ISM	ENSMUSG00000024691.14	ENSMUST00000151307.8	3687	4	5337	62	12	-62	3prime_fragment	FALSE	canonical	2	7	junction_2	32	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTGTTTTTGGTCCA	NA	False	NA	-60	True	ATTAAA	-19	NA	12550898	12567062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_12550945_12554453_12554535_12564198
ES.17457.1	chr19	-	280	1	Intergenic	novelGene_14467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCAGCACACAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	12581168	12580888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_12580900_12581200
ES.17458.1	chr19	-	1078	5	NNC	ENSMUSG00000084981.8	novel	461	4	NA	NA	-619	290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.866025403784439	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCAGGTATCTGTAG	NA	False	NA	NA	False	AATAAA	-7	NA	12699230	12683128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12683557_12683663_12683778_12695486_12695667_12698460_12698640_12699053
ES.17458.2	chr19	-	244	1	Intergenic	novelGene_14468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTGGATATGAAAGCT	NA	False	NA	NA	False	AATAAA	-44	NA	12689385	12689141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_12689100_12689400
ES.17458.3	chr19	-	3891	5	NNC	ENSMUSG00000084981.8	novel	461	4	NA	NA	-640	3514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTAGCTCTTTCTTT	NA	False	NA	NA	False	AATAAA	-27	NA	12699251	12689639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12692688_12695486_12695667_12695835_12695881_12698460_12698881_12699053
ES.17458.4	chr19	-	3984	3	NNC	ENSMUSG00000084981.8	novel	750	4	NA	NA	-581	912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATAAGTCCTAAGGTA	NA	False	NA	NA	False	AATAAA	-14	NA	12699192	12692241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12695667_12698460_12698881_12699053
ES.17459.1	chr19	-	1085	5	Intergenic	novelGene_14469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAACAGGATAGAGAGAA	NA	False	NA	NA	False	AATATA	-27	NA	12721638	12703925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_12704642_12705983_12706087_12711248_12711334_12714837_12714922_12721541
ES.1746.1	chr1	-	131	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	2175	False	NA	NA	False	NA	NA	NA	161966999	161966868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_161966900_161967000
ES.17460.1	chr19	+	1709	9	NNC	ENSMUSG00000024696.10	novel	1707	9	NA	NA	140	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.968245836551854	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTCATGTGGTAGA	NA	False	NA	NA	False	AATAAA	-26	NA	12773696	12811177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_12773799_12781296_12781455_12788583_12788631_12796699_12796800_12801307_12801476_12802162_12802337_12802453_12802536_12809971_12810121_12810448
ES.17460.2	chr19	+	158	1	Intergenic	novelGene_14470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	12788076	12788234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_12788100_12788200
ES.17461.1	chr19	-	6587	1	Genic_Genomic	ENSMUSG00000079415.3_ENSMUSG00000118491.2_ENSMUSG00000024695.17	novel	NA	NA	NA	NA	-4484	130	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTATCTTCATTCAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	12747480	12740893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_12740900_12747500
ES.17461.10	chr19	-	4935	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	600	-4	600	4	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCCTTTTAATCTA	NA	False	NA	0	True	AATAAA	-22	NA	12772890	12744379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.11	chr19	-	4799	11	NNC	ENSMUSG00000024695.17	novel	5531	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	43.2297351368245	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGTTTCCTTTTAA	NA	False	NA	-4	True	AATAAA	-18	NA	12773501	12744383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12773090
ES.17461.13	chr19	-	4908	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	11	612	11	-612	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTACCCTTTTCTTT	NA	False	NA	44	True	AATAAA	-17	NA	12773479	12744995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.14	chr19	-	4105	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	635	791	635	-791	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTAGAAACTTCCTG	NA	False	NA	NA	False	CATAAA	-13	NA	12772855	12745174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.15	chr19	-	3813	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	725	993	725	-993	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTCCTCTTGACGCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	12772765	12745376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.16	chr19	-	3546	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	683	1302	683	-1302	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTGCTTGATTTTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	12772807	12745685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.17	chr19	-	2682	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	614	2235	614	-2235	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAGATTCCTTATTTA	NA	False	NA	NA	False	NA	NA	NA	12772876	12746618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.18	chr19	-	1988	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	634	2909	634	1582	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGCATTGTGGATC	NA	False	NA	0	True	AGTAAA	-15	NA	12772856	12747292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.19	chr19	-	1585	11	NNC	ENSMUSG00000024695.17	novel	5531	11	NA	NA	-454	1582	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	42.943684052489	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGCATTGTGGATC	NA	False	NA	0	True	AGTAAA	-15	NA	12773944	12747292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12773838
ES.17461.2	chr19	-	8218	11	FSM	ENSMUSG00000079415.3_ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	675	-3362	675	2	multi-exon	TRUE	canonical	3	113	junction_5	14.0003571383019	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGCTTTACCCTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	12772815	12741021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.20	chr19	-	3009	10	NIC	ENSMUSG00000024695.17	novel	5531	11	NA	NA	673	1582	intron_retention	FALSE	canonical	3	113	junction_4	14.7455789566036	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGCATTGTGGATC	NA	False	NA	0	True	AGTAAA	-15	NA	12772817	12747292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_12747914_12748366_12748467_12752183_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.3	chr19	-	7348	12	NIC	ENSMUSG00000118491.2	novel	3221	13	NA	NA	637	-6	intron_retention	FALSE	canonical	2	5	junction_1	40.1453969037794	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCACCTTAGTGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	12772853	12741029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_12741745_12742644_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.5	chr19	-	5885	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	669	-1023	669	1023	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTGTATTAATTTCT	NA	False	NA	8	True	AATAAA	-30	NA	12772821	12743360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.6	chr19	-	2509	1	Genic_Genomic	ENSMUSG00000024695.17	novel	NA	NA	NA	NA	21390	609	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTAACTCTTTTGTC	NA	False	NA	NA	False	AATAGA	-17	NA	12746283	12743774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_12743800_12746300
ES.17461.7	chr19	-	5079	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	598	-146	598	146	multi-exon	FALSE	canonical	3	113	junction_5	14.0003571383019	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAAAACATGCCCCTTT	NA	False	NA	63	True	GATAAA	-19	NA	12772892	12744237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ES.17461.8	chr19	-	3370	5	NNC	ENSMUSG00000024695.17	novel	5531	11	NA	NA	14270	83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9559512098795	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCTTCCTTGGTTGT	NA	False	NA	0	True	AATAAA	-19	NA	12753403	12744300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_12746456_12746958_12747914_12748366_12748467_12752183_12752299_12753358
ES.17462.1	chr19	-	443	1	ISM	ENSMUSG00000057503.7	ENSMUST00000213493.2	8854	3	11068	1	8279	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	13115828	13115385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_13115400_13115800
ES.17463.1	chr19	+	180	1	Intergenic	novelGene_14471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCACTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	13130451	13130631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_13130500_13130600
ES.17464.1	chr19	+	1868	1	Intergenic	novelGene_14472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACCAGTGAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	14461796	14463664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14461800_14463700
ES.17464.2	chr19	+	5976	1	Intergenic	novelGene_14473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14461798	14467774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14461800_14467800
ES.17465.1	chr19	+	3302	1	Intergenic	novelGene_14474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGCGTCCTGCAATGC	NA	False	NA	NA	False	NA	NA	NA	14480674	14483976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14480700_14484000
ES.17466.1	chr19	+	5023	1	Intergenic	novelGene_14475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAATGACCAGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	14505609	14510632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14505600_14510600
ES.17466.2	chr19	+	5383	1	Intergenic	novelGene_14476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGCTATGAAGGACT	NA	False	NA	NA	False	NA	NA	NA	14505609	14510992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14505600_14511000
ES.17466.3	chr19	+	296	1	Intergenic	novelGene_14477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAATACATGGGACCA	NA	False	NA	NA	False	AATAAA	-13	NA	14510797	14511093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14510800_14511100
ES.17467.1	chr19	+	2895	2	Antisense	novelGene_ENSMUSG00000024642.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAAGCTGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	14534861	14537812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_14536344_14536399
ES.17468.10	chr19	-	4554	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	73.3328667280951	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14575415	14425509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442664_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573113_14574120_14574219_14574731
ES.17468.11	chr19	-	4260	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	65.8034859671742	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14575413	14425509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731_14574795_14575006
ES.17468.12	chr19	-	4677	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.3863498720789	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTATTTTCTAATTAT	NA	False	NA	-14	True	ATTAAA	-17	NA	14575450	14425511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573113_14574120_14574219_14574731
ES.17468.15	chr19	-	4455	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	66.3546099080943	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTATTTTCTAATTAT	NA	False	NA	-14	True	ATTAAA	-17	NA	14575413	14425511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442664_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.16	chr19	-	5869	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	2	intron_retention	FALSE	canonical	3	25	junction_13	40.5687932975505	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTATTTTCTAATTAT	NA	False	NA	-14	True	ATTAAA	-17	NA	14575413	14425511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.17	chr19	-	4088	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	407	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	50.7814550090829	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTATTTTCTAATTA	NA	False	NA	-15	True	ATTAAA	-16	NA	14575008	14425512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14445515_14445636_14493722_14493740_14495135_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.2	chr19	-	4712	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	66.6601751225454	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTAAGTACTATGGGT	NA	False	NA	68	True	ATTAAA	-23	NA	14575413	14425429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14525438_14525527_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.24	chr19	-	4511	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.1369445446495	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575413	14425513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431162_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.25	chr19	-	5566	16	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	573	0	intron_retention	FALSE	non_canonical	0	0	junction_9	49.1493867939593	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14574842	14425513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429932_14430942_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.3	chr19	-	4813	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	-191	80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.380637988787	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATTGTTAAGTACTAT	NA	False	NA	64	True	ATTAAA	-19	NA	14575606	14425433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.34	chr19	-	4402	17	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.7402573285859	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATTATTTTCTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	14575411	14425514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.36	chr19	-	4610	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	67.3397142785264	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATTATTTTCTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	14575413	14425514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14537229_14537301_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.37	chr19	-	4496	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	59.0435077080379	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATTATTTTCTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	14575413	14425514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574176_14574731
ES.17468.4	chr19	-	4605	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	58.1649686688381	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATTGTTAAGTACTAT	NA	False	NA	64	True	ATTAAA	-19	NA	14575413	14425433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442664_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.40	chr19	-	4206	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	345	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.380637988787	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATTATTTTCTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	14575070	14425514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14495111_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.42	chr19	-	4438	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.5684201579782	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATTATTTTCTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	14575435	14425514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14495172_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.44	chr19	-	4089	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	345	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.813657394226	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTGCATTGTACATA	NA	False	NA	NA	False	CATAAA	-29	NA	14575070	14425624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.45	chr19	-	4297	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.5684201579782	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTTTGATGTCATTAA	NA	False	NA	NA	False	NA	NA	NA	14575413	14425684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.46	chr19	-	4182	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	11	-352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.813657394226	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGATGTACAGTGCCT	NA	False	NA	NA	False	AAAAAG	-19	NA	14575404	14425865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.47	chr19	-	6234	17	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-1024	intron_retention	FALSE	non_canonical	0	0	junction_10	52.0212922153035	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTGAACAAGTAGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	14575413	14426537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14429084_14429427_14429579_14429783_14429932_14430942_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.48	chr19	-	3521	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	-1024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.813657394226	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTGAACAAGTAGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	14575415	14426537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.5	chr19	-	4239	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	663	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.0696829272881	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGATTGTTAAGTACT	NA	False	NA	62	True	ATTAAA	-17	NA	14574752	14425435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574452
ES.17468.50	chr19	-	3298	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-1235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.380637988787	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCATTGTATTTGATGCT	NA	False	NA	NA	False	AATAAA	-28	NA	14575413	14426748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445643_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.52	chr19	-	3219	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	-1249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.5684201579782	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGATAATGAAGGTGCA	NA	False	NA	NA	False	AATAAA	-14	NA	14575413	14426762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.53	chr19	-	1252	8	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	853	27945	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	64.457864737599	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTTGAGTCAGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	14574562	14493144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14493740_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574452
ES.17468.54	chr19	-	2156	6	ISM	ENSMUSG00000024642.18	ENSMUST00000052011.15	4545	20	-17	95528	-17	48	5prime_fragment	FALSE	canonical	3	165	junction_1	12.3028451993838	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAAAAGTGCCCCTT	NA	False	NA	NA	False	NA	NA	NA	14575432	14521041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.6	chr19	-	4338	18	NIC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	45.7870805730704	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAATTATTTTTGCTAAT	NA	False	NA	-4	True	ATTAAA	-27	NA	14575415	14425501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.7	chr19	-	4440	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	25	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.1559418809748	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14575390	14425509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429902_14430996_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.8	chr19	-	4503	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	-29	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.5684201579782	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14575444	14425509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445646_14495131_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17468.9	chr19	-	4421	18	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.5613853385743	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTCTAATTATTT	NA	False	NA	-12	True	ATTAAA	-19	NA	14575413	14425509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14445515_14445636_14493722_14493740_14495135_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ES.17469.1	chr19	+	157	1	Intergenic	novelGene_14478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	14638850	14639007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14638800_14639000
ES.1747.1	chr1	-	4523	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	20	-2	-2	2	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTTTGTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	162376100	162359693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ES.1747.10	chr1	-	2412	8	NNC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	2	3	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_6	32.8061716443596	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGGTTTATCTCAA	NA	False	NA	-8	True	NA	NA	NA	162376105	162361244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373901_162374097_162375672
ES.1747.11	chr1	-	3625	1	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	-712	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	162372643	162369018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162369000_162372600
ES.1747.3	chr1	-	4283	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	27	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.1174780711807	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	162376064	162359697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162373336_162374097_162375672
ES.1747.4	chr1	-	2987	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	10	1544	-3	8	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	-3	True	NA	NA	NA	162376110	162361239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ES.1747.5	chr1	-	6102	6	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	-4	8	intron_retention	FALSE	canonical	3	82	junction_4	10.5565145763173	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	-3	True	NA	NA	NA	162376111	162361239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162374097_162375672
ES.1747.6	chr1	-	4353	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	3	8	intron_retention	FALSE	canonical	3	74	junction_5	12.0473602456675	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTATCTCAAGTATT	NA	False	NA	-3	True	NA	NA	NA	162376094	162361239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162374097_162375672
ES.1747.7	chr1	-	2518	8	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	30.8399422959306	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTTTATCTCAAGT	NA	False	NA	-6	True	NA	NA	NA	162376104	162361242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373796_162374097_162375672
ES.1747.8	chr1	-	2779	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.1174780711807	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTTTATCTCAAGT	NA	False	NA	-6	True	NA	NA	NA	162376105	162361242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162373336_162374097_162375672
ES.1747.9	chr1	-	2293	7	NIC	ENSMUSG00000026694.20	novel	4541	8	NA	NA	12	5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	33.2536547698979	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTTTATCTCAAGT	NA	False	NA	-6	True	NA	NA	NA	162376079	162361242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162373796_162374097_162375672
ES.17470.1	chr19	+	7471	1	Intergenic	novelGene_14479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAGAAAGCATGTTA	NA	False	NA	NA	False	NA	NA	NA	14654923	14662394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_14654900_14662400
ES.17471.1	chr19	-	178	1	Intergenic	novelGene_14480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAAAACGGGA	NA	False	NA	NA	False	NA	NA	NA	14667367	14667189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_14667200_14667400
ES.17472.1	chr19	-	157	1	Intergenic	novelGene_14481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	69	False	NA	NA	False	NA	NA	NA	14679805	14679648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_14679600_14679800
ES.17473.1	chr19	+	2846	1	Antisense	novelGene_ENSMUSG00000024640.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAGGAACAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	15894731	15897577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_15894700_15897600
ES.17474.1	chr19	+	173	1	Intergenic	novelGene_14482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAACATATTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	15904354	15904527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_15904400_15904500
ES.17475.1	chr19	-	3919	10	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-20	1582	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1050.93458700951	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAATCGAGTGCAC	NA	False	NA	NA	False	NA	NA	NA	15902314	15880459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15881909_15882079_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.10	chr19	-	2041	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	57	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	1150.5794813298	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	15902366	15882490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15898299_15898361_15902227
ES.17475.11	chr19	-	2183	10	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	1374.81552522332	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	15902346	15882490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895393_15895486_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.12	chr19	-	2073	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	1101.94616900056	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	15902337	15882490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894605_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.13	chr19	-	4117	7	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	50	0	intron_retention	FALSE	canonical	3	2829	junction_2	242.051417861761	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	15902373	15882490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15896889_15898299_15898361_15902227
ES.17475.14	chr19	-	2041	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1113.79418402818	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	15902309	15882492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892387_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.15	chr19	-	1886	8	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1155.38441345603	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	15902309	15882492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895680_15898299_15898361_15902227
ES.17475.16	chr19	-	8488	7	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-61	1	intron_retention	FALSE	canonical	3	2829	junction_2	259.506422528101	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	15902355	15882492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.17	chr19	-	5854	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1104.57779688667	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTGCCTGTGAATT	NA	False	NA	-16	True	ATTAAA	-18	NA	15902373	15882492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15890532_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.18	chr19	-	9565	7	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-52	0	intron_retention	FALSE	canonical	3	2829	junction_2	236.804185398447	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902346	15882493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.19	chr19	-	10525	6	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-56	0	intron_retention	FALSE	canonical	3	2829	junction_2	259.373861443284	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902350	15882493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.2	chr19	-	3794	10	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-56	1421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.93458700951	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCTACATTCTCAACT	NA	False	NA	NA	False	AGTAAA	-28	NA	15902350	15880620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15881909_15882079_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.20	chr19	-	3498	19	Fusion	ENSMUSG00000024640.10_ENSMUSG00000041491.9	novel	2617	9	NA	NA	-25	0	multi-exon	FALSE	canonical	0	0	junction_8	1522.11066906743	1660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	150	False	NA	-17	True	ATTAAA	-17	NA	15962378	15882493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.21	chr19	-	6762	5	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1441.66648362234	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902309	15882493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15892147_15898322_15898361_15902227
ES.17475.22	chr19	-	5386	2	ISM	ENSMUSG00000024640.10	ENSMUST00000161707.2	1572	3	-1583	2	-1583	-2	intron_retention	FALSE	canonical	3	3561	junction_1	0	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCATTGCCTGTGA	NA	False	NA	-19	True	ATTAAA	-15	NA	15888659	15882495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_15883516_15884293
ES.17475.24	chr19	-	1919	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-55	-2	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	1176.5330251139	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCATTGCCTGTGA	NA	False	NA	-19	True	ATTAAA	-15	NA	15902349	15882495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.26	chr19	-	4174	2	NIC	ENSMUSG00000024640.10	novel	1572	3	NA	NA	-1826	-2	intron_retention	FALSE	canonical	3	2829	junction_1	0	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCATTGCCTGTGA	NA	False	NA	-19	True	ATTAAA	-15	NA	15888902	15882495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15884432_15886664
ES.17475.27	chr19	-	1868	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1105.5491565281	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATTCATTGCCTGTG	NA	False	NA	-20	True	ATTAAA	-14	NA	15902336	15882496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886727_15892367_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.29	chr19	-	7614	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-55	-3	intron_retention	FALSE	canonical	1	3	junction_5	1431.10997131597	1511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATTCATTGCCTGTG	NA	False	NA	-20	True	ATTAAA	-14	NA	15902349	15882496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15894614_15895393_15895486_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.3	chr19	-	3664	10	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-52	1295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1050.93458700951	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATAGAGCCTGCGATGA	NA	False	NA	-6	True	ATTAAA	-21	NA	15902346	15880746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15881909_15882079_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.30	chr19	-	3566	20	Fusion	ENSMUSG00000024640.10_ENSMUSG00000041491.9	novel	2617	9	NA	NA	-18	-3	multi-exon	FALSE	canonical	0	0	junction_8	1505.76331035605	1660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATTCATTGCCTGTG	157	False	NA	-20	True	ATTAAA	-14	NA	15962371	15882496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.31	chr19	-	2060	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1113.79418402818	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCATTCATTGCCTGTG	NA	False	NA	-20	True	ATTAAA	-14	NA	15902327	15882496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892407_15894455_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.32	chr19	-	1858	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	80	679	-49	-227	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAAATGGTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	15902343	15882720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.33	chr19	-	7199	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	56	-344	intron_retention	FALSE	canonical	3	2829	junction_2	240.614349751054	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCATGACTGTCGTC	NA	False	NA	-1	True	AATGAA	-22	NA	15902367	15882837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.34	chr19	-	1774	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	46	797	46	-345	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCATGACTGTCGT	NA	False	NA	-2	True	AATGAA	-21	NA	15902377	15882838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.35	chr19	-	1698	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-53	-345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1087.72606845658	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCATGACTGTCGT	NA	False	NA	-2	True	AATGAA	-21	NA	15902347	15882838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883505_15884328_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.37	chr19	-	1674	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-55	-347	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	1150.5794813298	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTGCATGACTGTC	NA	False	NA	-4	True	AATGAA	-19	NA	15902349	15882840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15898299_15898361_15902227
ES.17475.4	chr19	-	2599	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-52	129	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	1150.5794813298	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTCTTTTCCTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	15902346	15881912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15898299_15898361_15902227
ES.17475.40	chr19	-	3112	19	Fusion	ENSMUSG00000024640.10_ENSMUSG00000041491.9	novel	2617	9	NA	NA	-3	-348	multi-exon	FALSE	canonical	0	0	junction_8	1522.11066906743	1654	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTTTGTGCATGACTGT	188	False	NA	-5	True	AATGAA	-18	NA	15962340	15882841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.41	chr19	-	7190	8	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-38	-350	intron_retention	FALSE	canonical	0	0	junction_2	1181.79835290915	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGACTTTGTGCATGACT	NA	False	NA	-7	True	AATGAA	-16	NA	15902332	15882843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884464_15886664_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.42	chr19	-	8147	7	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	57	-351	intron_retention	FALSE	canonical	3	2829	junction_2	259.506422528101	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGACTTTGTGCATGAC	NA	False	NA	-8	True	AATGAA	-15	NA	15902366	15882844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.43	chr19	-	5422	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-3	-355	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1104.57779688667	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCATGACTTTGTGCA	NA	False	NA	-12	True	AATGAA	-11	NA	15902297	15882848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15883516_15884293_15884432_15886664_15890532_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.44	chr19	-	1297	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	80	1240	-49	-788	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGAATAACGACTAAAC	NA	False	NA	NA	False	AATACA	-22	NA	15902343	15883281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.45	chr19	-	4488	1	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-56	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTCCATGAAGATCCT	NA	False	NA	NA	False	AATAAA	-21	NA	15902350	15897862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15897900_15902400
ES.17475.46	chr19	-	4117	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	2	-1571	2	1570	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTGTGGTTTTGTCTT	177	False	NA	NA	False	NA	NA	NA	15962351	15931566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.47	chr19	-	4088	16	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-12	1570	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.0687306006986	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTGTGGTTTTGTCTT	163	False	NA	NA	False	NA	NA	NA	15962365	15931566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15931574_15931616_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.48	chr19	-	3871	13	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-1	1568	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.5875054969215	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGGTGTGGTTTTGTC	174	False	NA	NA	False	NA	NA	NA	15962354	15931568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15938306_15938474_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.5	chr19	-	2882	7	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-52	5	intron_retention	FALSE	canonical	1	10	junction_3	1254.25242231733	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGTGAATTATTCTGC	NA	False	NA	-9	True	ATTAAA	-25	NA	15902346	15882485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15894440_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.50	chr19	-	3928	14	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	4	1568	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	44.4826939288933	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGGTGTGGTTTTGTC	195	False	NA	NA	False	NA	NA	NA	15962333	15931568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.51	chr19	-	2597	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-19	-30	-19	29	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTATAGGGCAATTTT	156	False	NA	NA	False	GATAAA	-13	NA	15962372	15933107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.52	chr19	-	2145	11	NIC	ENSMUSG00000041491.9	novel	2465	14	NA	NA	-3	29	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	64.3615568487898	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTATAGGGCAATTTT	188	False	NA	NA	False	GATAAA	-13	NA	15962340	15933107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15947896_15947943_15948259_15948396_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.53	chr19	-	2635	16	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-15	4	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	54.2496287749716	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAGTGATAAAATACAGG	160	False	NA	NA	False	AATAAA	-21	NA	15962368	15933132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15935458_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.54	chr19	-	8273	7	ISM	ENSMUSG00000041491.9	ENSMUST00000236749.2	2465	14	6748	-211	6748	3	intron_retention	FALSE	canonical	3	141	junction_1	14.0712472794703	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTGATAAAATACAG	7219	False	NA	NA	False	AATAAA	-20	NA	15955309	15933133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259
ES.17475.55	chr19	-	6924	13	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-3	2	intron_retention	FALSE	canonical	3	142	junction_3	16.0491865491335	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGAGTGATAAAATACA	172	False	NA	NA	False	AATAAA	-19	NA	15962356	15933134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.56	chr19	-	6069	12	NNC	ENSMUSG00000041491.9	novel	2465	14	NA	NA	-8	2	intron_retention	FALSE	canonical	1	2	junction_4	63.5098742892112	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGAGTGATAAAATACA	183	False	NA	NA	False	AATAAA	-19	NA	15962345	15933134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946516_15947896_15947943_15948259_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.57	chr19	-	2594	15	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	43.3961932873926	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTGAGTGATAAAATAC	183	False	NA	NA	False	AATAAA	-18	NA	15962345	15933135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951884_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.58	chr19	-	4294	15	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	12	junction_1	41.602651504981	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	188	False	NA	NA	False	AATAAA	-17	NA	15962340	15933136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.59	chr19	-	5033	10	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	3822	0	intron_retention	FALSE	canonical	3	141	junction_1	14.3527000944073	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	4293	False	NA	NA	False	AATAAA	-16	NA	15958235	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15953727_15956144
ES.17475.6	chr19	-	2162	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	10	445	10	4	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCTGTGAATTATTCTG	NA	False	NA	-10	True	ATTAAA	-24	NA	15902413	15882486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17475.60	chr19	-	2872	14	FSM	ENSMUSG00000041491.9	ENSMUST00000236749.2	2465	14	-200	-207	80	0	multi-exon	FALSE	canonical	3	141	junction_1	15.7062532302438	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	271	False	NA	NA	False	AATAAA	-16	NA	15962257	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.61	chr19	-	2525	15	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.879298731211	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	192	False	NA	NA	False	AATAAA	-16	NA	15962336	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951826_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.63	chr19	-	4293	9	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	5804	0	intron_retention	FALSE	canonical	3	141	junction_1	14.9248115565993	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	6275	False	NA	NA	False	AATAAA	-16	NA	15956253	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15936895_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15953727_15956144
ES.17475.64	chr19	-	5417	15	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	44	0	intron_retention	FALSE	canonical	3	6	junction_1	43.0491532069649	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	235	False	NA	NA	False	AATAAA	-16	NA	15962293	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15933966_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.65	chr19	-	3792	14	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	141	junction_1	16.4572244526953	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	173	False	NA	NA	False	AATAAA	-16	NA	15962355	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15936895_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.66	chr19	-	3875	15	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	6	junction_1	55.7707131833509	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	157	False	NA	NA	False	AATAAA	-16	NA	15962371	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15935458_15935526_15936895_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.67	chr19	-	2390	14	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	44.4826939288933	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	164	False	NA	NA	False	AATAAA	-16	NA	15962364	15933137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.68	chr19	-	2141	13	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	54	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.4488028182892	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATATTGAGTGATAAAA	245	False	NA	NA	False	AATAAA	-15	NA	15962283	15933138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15933768_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.69	chr19	-	4951	14	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-12	737	-12	-530	5prime_fragment	FALSE	canonical	3	142	junction_4	15.4464143404329	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAAAAGTAAACA	163	False	NA	NA	False	NA	NA	NA	15962365	15933874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.7	chr19	-	9514	6	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-39	3	intron_retention	FALSE	canonical	3	2829	junction_2	263.747909944325	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTGTGAATTATTCT	NA	False	NA	-11	True	ATTAAA	-23	NA	15902333	15882487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15896889_15898299_15898361_15902227
ES.17475.70	chr19	-	3577	15	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	-8	-530	intron_retention	FALSE	canonical	3	12	junction_1	41.602651504981	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAAAAGTAAACA	167	False	NA	NA	False	NA	NA	NA	15962361	15933874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.73	chr19	-	3434	13	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	2	-3275	intron_retention	FALSE	canonical	3	142	junction_3	16.0491865491335	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	177	False	NA	NA	False	NA	NA	NA	15962351	15936619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.74	chr19	-	2318	12	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	-2	-12352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.9781353075288	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAAGTTGTCCTTGAAG	173	False	NA	NA	False	AGTAAA	-24	NA	15962355	15945696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15952456_15952530_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.75	chr19	-	1785	11	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	-4	13021	-4	-12814	5prime_fragment	FALSE	canonical	3	142	junction_1	16.9849933765074	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGTCAGCTGATTCAG	171	False	NA	NA	False	AATAAA	-21	NA	15962357	15946158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ES.17475.76	chr19	-	725	1	Genic_Genomic	ENSMUSG00000041491.9	novel	NA	NA	NA	NA	-24	-28308	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATGTATAACA	151	False	NA	NA	False	AATACA	-24	NA	15962377	15961652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_15961700_15962400
ES.17475.8	chr19	-	7553	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	50	1	intron_retention	FALSE	canonical	3	2829	junction_2	240.614349751054	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGCCTGTGAATTATT	NA	False	NA	-13	True	ATTAAA	-21	NA	15902373	15882489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_15883516_15884293_15884432_15886664_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ES.17476.1	chr19	+	3600	1	NIC	ENSMUSG00000097557.3	novel	938	3	NA	NA	3	-22016	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	15962444	15966044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_15962400_15966000
ES.17477.1	chr19	-	6379	1	Antisense	novelGene_ENSMUSG00000097557.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAAATCGCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	15989663	15983284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_15983300_15989700
ES.17478.1	chr19	+	183	1	Intergenic	novelGene_14484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACACAATATTCT	NA	False	NA	NA	False	NA	NA	NA	16012630	16012813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_16012600_16012800
ES.17479.1	chr19	-	3388	2	Antisense	novelGene_ENSMUSG00000117711.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	16013457	15989984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_15993261_16013345
ES.17479.2	chr19	-	3644	4	Antisense	novelGene_ENSMUSG00000117711.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	16013453	15989990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_15993261_16000414_16000602_16005957_16006037_16013345
ES.17479.3	chr19	-	3500	3	Antisense	novelGene_ENSMUSG00000117711.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	16013496	15989990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_15993261_16005957_16006037_16013345
ES.17479.4	chr19	-	1390	3	Antisense	novelGene_ENSMUSG00000117711.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGCTCTTCCTGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	16013473	16000495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_16001679_16005957_16006037_16013345
ES.17479.5	chr19	-	1945	1	Intergenic	novelGene_14483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16013473	16011528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16011500_16013500
ES.1748.1	chr1	+	5163	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	15	-3717	15	-2	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCACTGTGGCTTGTTC	NA	False	NA	71	True	AATAAA	-22	NA	162398173	162426651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.10	chr1	+	1317	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	40	104	3	-104	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTCATTGGAGTGTT	NA	False	NA	12	True	AATAAA	-8	NA	162398198	162422830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.11	chr1	+	2777	9	NNC	ENSMUSG00000026696.16	novel	2752	8	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.326872164704	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTAAGCACTGTGGC	NA	False	NA	65	True	AATAAA	-16	NA	162398199	162426645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114_162422264_162424617
ES.1748.13	chr1	+	2375	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	119	258	7	-252	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGTAGTATGTCAT	NA	False	NA	NA	False	AGTAAA	-43	NA	162398202	162426395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
ES.1748.14	chr1	+	2844	7	ISM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	46	439	9	154	intron_retention	FALSE	canonical	3	280	junction_6	22.6157516395591	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGAGTCAGTCTGGTG	NA	False	NA	2	True	ATTAAA	-16	NA	162398204	162422495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194
ES.1748.15	chr1	+	654	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	54	753	17	-117	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATTTAAAGATTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	162398212	162422181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.16	chr1	+	2708	9	NNC	ENSMUSG00000026696.16	novel	2752	8	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.326872164704	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGCACTGTGGCTT	NA	False	NA	67	True	AATAAA	-18	NA	162398215	162426647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114_162422209_162424617
ES.1748.17	chr1	+	6404	6	NIC	ENSMUSG00000026696.16	novel	1461	8	NA	NA	28	759	intron_retention	FALSE	canonical	3	271	junction_5	25.7806128709152	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162398223	162423693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162420247_162422114
ES.1748.18	chr1	+	2205	8	NIC	ENSMUSG00000026696.16	novel	1461	8	NA	NA	-34	790	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	108.098405659484	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162398303	162423724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162398449_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.19	chr1	+	5190	8	FSM	ENSMUSG00000026696.16	ENSMUST00000150040.8	901	8	11	-4300	11	-6	multi-exon	FALSE	canonical	0	0	junction_1	108.098405659484	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAGTAAGCACTG	NA	False	NA	61	True	AATAAA	-12	NA	162398416	162426641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398630_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.2	chr1	+	5270	6	NIC	ENSMUSG00000026696.16	novel	1461	8	NA	NA	17	790	intron_retention	FALSE	canonical	3	280	junction_5	22.4997777766804	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162398175	162423724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162417114_162420194
ES.1748.20	chr1	+	4679	1	NIC	ENSMUSG00000026696.16	novel	2752	8	NA	NA	16656	790	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162419045	162423724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162419000_162423700
ES.1748.21	chr1	+	2424	1	NIC	ENSMUSG00000026696.16	novel	1461	8	NA	NA	18024	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGGAGTGTTTGAAAAC	NA	False	NA	19	True	AATAAA	-15	NA	162420413	162422837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162420400_162422800
ES.1748.3	chr1	+	1004	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	18	439	18	154	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGAGTCAGTCTGGTG	NA	False	NA	2	True	ATTAAA	-16	NA	162398176	162422495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.4	chr1	+	2657	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	93	2	18	-2	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCACTGTGGCTTGTTC	NA	False	NA	71	True	AATAAA	-22	NA	162398176	162426651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
ES.1748.5	chr1	+	2232	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	19	-790	-18	790	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162398177	162423724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.6	chr1	+	1436	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	28	-3	-9	3	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAGGCTGCAGGTAAT	NA	False	NA	119	True	AATAAA	-24	NA	162398186	162422937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.7	chr1	+	1220	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	29	212	-8	-212	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATACGTGGTAATTT	NA	False	NA	-96	True	AGTAAA	-17	NA	162398187	162422722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ES.1748.8	chr1	+	3381	7	NIC	ENSMUSG00000026696.16	novel	1461	8	NA	NA	1	790	intron_retention	FALSE	canonical	3	271	junction_6	27.5827039203113	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTGGTAGCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	162398196	162423724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162417114_162420194_162420247_162422114
ES.1748.9	chr1	+	1278	8	FSM	ENSMUSG00000026696.16	ENSMUST00000194810.6	600	8	-139	-539	3	-97	multi-exon	FALSE	canonical	3	6	junction_5	110.137391007592	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGGAGTGTTTGAAAAC	NA	False	NA	19	True	AATAAA	-15	NA	162398198	162422837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415820_162417033_162417114_162420194_162420247_162422114
ES.17480.1	chr19	-	172	1	Intergenic	novelGene_14485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	16098508	16098336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16098300_16098500
ES.17481.1	chr19	+	5843	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-199	0	-199	0	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTGCTCTTCTTAAAA	NA	False	NA	20	True	AATAAA	-24	NA	16109995	16364827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.10	chr19	+	9459	1	Intergenic	novelGene_14486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTTTAACACTTTGAT	NA	False	NA	NA	False	NA	NA	NA	16121631	16131090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_16121600_16131100
ES.17481.11	chr19	+	3094	3	ISM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	202151	1449	115350	-1449	3prime_fragment	FALSE	canonical	3	23	junction_2	5.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	16312345	16363378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_16312475_16355520_16355675_16360567
ES.17481.12	chr19	+	5469	2	ISM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	245324	-1053	158523	1053	3prime_fragment	FALSE	canonical	3	23	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTTGTACTATAGTAT	5897	False	NA	1	True	AATACA	-13	NA	16355518	16365880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_16355675_16360567
ES.17481.13	chr19	+	1376	4	NNC	ENSMUSG00000024639.6	novel	5644	7	NA	NA	164969	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGCTGCTCTTCTTAAA	2654	False	NA	19	True	AATAAA	-23	NA	16361964	16364826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_16362096_16362398_16362622_16362958_16363072_16363917
ES.17481.2	chr19	+	1820	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-170	3994	-170	-3994	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTTGCATAATACT	NA	False	NA	NA	False	GATAAA	-24	NA	16110024	16360833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.3	chr19	+	6119	7	NNC	ENSMUSG00000024639.6	novel	481	3	NA	NA	-147	1062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.699148392023	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATAGTATTCTTCATTC	NA	False	NA	10	True	AATACA	-22	NA	16110047	16365889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_16110092_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.4	chr19	+	5832	8	NNC	ENSMUSG00000024639.6	novel	5644	7	NA	NA	-136	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.396711642679	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCGCTGCTCTTCTTAAA	NA	False	NA	19	True	AATAAA	-23	NA	16110058	16364826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_16110826_16196951_16197137_16293380_16293536_16308097_16308151_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.5	chr19	+	2859	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-136	2921	-136	-2921	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTGTCTCAAAATGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	16110058	16361906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.6	chr19	+	5611	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-100	133	-100	-133	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCAAGACTCAGATTCC	NA	False	NA	NA	False	AATAAA	-35	NA	16110094	16364694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.7	chr19	+	6780	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	-81	-1055	-81	1055	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTACTATAGTATTC	NA	False	NA	3	True	AATACA	-15	NA	16110113	16365882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17481.8	chr19	+	2227	3	FSM	ENSMUSG00000024639.6	ENSMUST00000170229.2	862	3	-453	-912	12	165	multi-exon	FALSE	canonical	3	27	junction_1	3.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATTAAATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	16110206	16294803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380
ES.17481.9	chr19	+	4268	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	437	939	-28	-939	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTCTCTTCTATTGT	NA	False	NA	NA	False	AAAACA	-12	NA	16110631	16363888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ES.17482.1	chr19	-	1979	1	Intergenic	novelGene_14487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGCAACTTGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	16150883	16148904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16148900_16150900
ES.17483.1	chr19	-	339	1	Intergenic	novelGene_14488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTCTTCTTGAGGTAG	NA	False	NA	NA	False	AAAAAG	-44	NA	16244135	16243796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16243800_16244100
ES.17484.1	chr19	-	5224	1	Intergenic	novelGene_14489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	16303374	16298150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16298200_16303400
ES.17485.1	chr19	+	2807	7	FSM	ENSMUSG00000024697.5	ENSMUST00000025602.4	3290	7	407	76	407	-76	multi-exon	FALSE	canonical	1	2	junction_2	2.3392781412697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCAACGATGATGTGCT	NA	False	NA	NA	False	AATACA	-14	NA	16413532	16588108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16414182_16511076_16511262_16576303_16576459_16580627_16580757_16582326_16582457_16585346_16585501_16586703
ES.17485.2	chr19	+	1498	7	FSM	ENSMUSG00000024697.5	ENSMUST00000025602.4	3290	7	909	883	909	118	multi-exon	FALSE	canonical	1	2	junction_2	2.3392781412697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTCTTCCCCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	16414034	16587301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_16414182_16511076_16511262_16576303_16576459_16580627_16580757_16582326_16582457_16585346_16585501_16586703
ES.17485.3	chr19	+	154	1	Intergenic	novelGene_14490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAAGTGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	16565284	16565438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_16565300_16565400
ES.17486.1	chr19	+	9141	5	Antisense	novelGene_ENSMUSG00000046230.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCATACACTCATCGG	NA	False	NA	NA	False	NA	NA	NA	16656086	16670863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_16657474_16659231_16659589_16660145_16660242_16662643_16662872_16663790
ES.17487.1	chr19	+	281	1	Intergenic	novelGene_14492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACTCTAAAACATTTGT	NA	False	NA	NA	False	AGTAAA	-39	NA	16684149	16684430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_16684100_16684400
ES.17487.2	chr19	+	177	1	Intergenic	novelGene_14493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16684151	16684328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_16684200_16684300
ES.17488.1	chr19	-	6548	35	ISM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	94341	-319	-13	-1	3prime_fragment	TRUE	canonical	3	26	junction_33	10.7942779279653	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGTGTTGCTTTCCT	NA	False	NA	NA	False	ATTAAA	-27	NA	16663950	16592730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792
ES.17488.11	chr19	-	10856	72	NNC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.5814050386862	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTTGGTCAATGGATA	NA	False	NA	-30	True	CATAAA	-13	NA	16758314	16593052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617471_16617561_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663791_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.12	chr19	-	5523	25	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	50	-3	intron_retention	FALSE	canonical	3	31	junction_22	9.50210137577765	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTTGGTCAATGGATA	NA	False	NA	-30	True	CATAAA	-13	NA	16643598	16593052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16594280_16596457_16596533_16596741_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517
ES.17488.13	chr19	-	10807	72	NNC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	11.0191624042507	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTTTGGTCAATGG	NA	False	NA	-33	True	CATAAA	-10	NA	16758290	16593055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681145_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.14	chr19	-	2658	19	ISM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	124983	477	8704	-477	3prime_fragment	FALSE	canonical	3	37	junction_3	9.05691877946235	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGCCTTAATA	NA	False	NA	NA	False	NA	NA	NA	16633308	16593526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222
ES.17488.15	chr19	-	10151	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	-30	717	-24	360	multi-exon	FALSE	canonical	3	25	junction_58	9.97459578127363	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAACATTATTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	16758321	16593766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.16	chr19	-	9871	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	-18	985	-12	92	multi-exon	FALSE	canonical	3	25	junction_58	9.97459578127363	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCATCCGGTTATGATT	NA	False	NA	NA	False	ATTAAA	-34	NA	16758309	16594034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.18	chr19	-	12407	69	NIC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-40	0	intron_retention	FALSE	canonical	3	14	junction_1	10.4210140870299	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGGATTTTTTTTT	NA	False	NA	1	True	AATAAA	-15	NA	16758337	16609919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16612958_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.19	chr19	-	12332	69	NNC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_24	11.482045560013	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTGGATTTTTTTTT	NA	False	NA	1	True	AATAAA	-15	NA	16758302	16609919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16612958_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646026_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.2	chr19	-	4213	25	ISM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	116330	-197	51	-123	3prime_fragment	FALSE	canonical	3	31	junction_23	9.69670261824434	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTCTATAGTTGTAT	NA	False	NA	NA	False	CATAAA	-16	NA	16641961	16592852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872
ES.17488.20	chr19	-	6733	28	NNC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-2093	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.3318498610248	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGGCTGTAATGTAATA	347	False	NA	NA	False	AATAAA	-15	NA	16657436	16610062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16612958_16613132_16613245_16617353_16617478_16617561_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373
ES.17488.21	chr19	-	9737	69	NIC	ENSMUSG00000046230.12	novel	2939	22	NA	NA	-21	0	intron_retention	FALSE	canonical	3	14	junction_1	10.4210140870299	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTCATCTGTGGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	16758318	16612570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16612958_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.23	chr19	-	177	1	Intergenic	novelGene_14491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGATTAAAATGG	NA	False	NA	NA	False	NA	NA	NA	16647653	16647476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16647500_16647700
ES.17488.24	chr19	-	9006	44	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-21	-9094	intron_retention	FALSE	canonical	3	25	junction_30	6.13891822132118	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTAGTTGATCTTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	16758318	16652205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.25	chr19	-	6005	32	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-1898	-9094	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.79030778335541	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTAGTTGATCTTCTTG	9154	False	NA	NA	False	AATAAA	-18	NA	16722300	16652205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16653571_16655217_16655474_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149
ES.17488.27	chr19	-	8795	44	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-24	-9308	intron_retention	FALSE	canonical	3	25	junction_30	6.13891822132118	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAAGTTCTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	16758321	16652419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.28	chr19	-	7120	45	ISM	ENSMUSG00000046230.12	ENSMUST00000224149.2	10037	74	-110	58296	1	-9311	5prime_fragment	FALSE	canonical	3	25	junction_31	6.07749540626919	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTTCTAAGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	16758296	16652422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.29	chr19	-	3063	1	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	131	1788	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTCTTATCAATGCTGGG	NA	False	NA	NA	False	AGTAAA	-19	NA	16663806	16660743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16660700_16663800
ES.17488.3	chr19	-	10869	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	-31	0	-25	0	multi-exon	FALSE	canonical	3	25	junction_58	9.97459578127363	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	-27	True	CATAAA	-16	NA	16758322	16593049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.30	chr19	-	3996	33	ISM	ENSMUSG00000046230.12	ENSMUST00000224149.2	10037	74	-149	82051	-38	-13646	5prime_fragment	FALSE	canonical	3	25	junction_19	6.23498195666996	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGTAAGCTTTTCACA	NA	False	NA	NA	False	AATAAA	-19	NA	16758335	16676177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.31	chr19	-	4562	32	ISM	ENSMUSG00000046230.12	ENSMUST00000224149.2	10037	74	-112	83456	-1	-15051	5prime_fragment	FALSE	canonical	3	25	junction_18	6.32422625062503	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTTTTCCATAGAAC	NA	False	NA	NA	False	AATAAA	-12	NA	16758298	16677582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.32	chr19	-	3640	23	ISM	ENSMUSG00000046230.12	ENSMUST00000224149.2	10037	74	-101	102501	4	3074	5prime_fragment	FALSE	canonical	3	25	junction_9	6.26234318356638	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTAGTTTCTTTTTTAG	NA	False	NA	NA	False	AATAAA	-32	NA	16758287	16696627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.33	chr19	-	2786	24	NNC	ENSMUSG00000046230.12	novel	2689	19	NA	NA	3	3068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.66802458793379	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTTAGTAGTTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	16758273	16696633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16696859_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.34	chr19	-	1093	11	ISM	ENSMUSG00000046230.12	ENSMUST00000224428.2	2689	19	-50	11908	-29	-4953	5prime_fragment	FALSE	canonical	3	29	junction_4	6.00333240792145	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGATTGACTTACTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	16758326	16723296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.35	chr19	-	3212	2	ISM	ENSMUSG00000046230.12	ENSMUST00000225764.2	2591	6	-1	11274	-1	-11274	5prime_fragment	FALSE	canonical	3	45	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16758298	16740957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_16743905_16758033
ES.17488.5	chr19	-	10706	71	NIC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_29	11.0965061609315	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	-27	True	CATAAA	-16	NA	16758318	16593049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17488.6	chr19	-	9638	60	NNC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-1874	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	12.831392845056	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	9178	False	NA	-27	True	CATAAA	-16	NA	16722276	16593049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613237_16617353_16617478_16617565_16617612_16617900_16618065_16618151_16618224_16618921_16619036_16621108_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149
ES.17488.8	chr19	-	10849	72	NNC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_61	11.0305161821464	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	-27	True	CATAAA	-16	NA	16758310	16593049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723124_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ES.17489.1	chr19	-	154	1	Intergenic	novelGene_14494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	16824760	16824606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16824600_16824800
ES.1749.1	chr1	+	7439	17	Antisense	novelGene_ENSMUSG00000040225.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGATGGCGGCTAGC	NA	False	NA	NA	False	NA	NA	NA	162527453	162568084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_162529973_162531937_162534193_162535336_162535545_162536424_162536680_162537096_162537256_162537851_162538399_162540872_162540926_162541810_162541957_162542960_162543052_162543157_162543289_162543847_162543931_162546258_162546480_162548049_162548175_162548997_162549109_162550678_162550857_162552272_162552439_162567893
ES.17490.1	chr19	-	3480	1	Intergenic	novelGene_14495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGTAGACCCAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	16883107	16879627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_16879600_16883100
ES.17491.1	chr19	-	173	1	Intergenic	novelGene_14496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGATAGAGA	NA	False	NA	NA	False	NA	NA	NA	17053467	17053294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_17053300_17053500
ES.17492.1	chr19	+	4070	9	FSM	ENSMUSG00000039126.11	ENSMUST00000226052.2	1528	9	13	-2555	13	1	multi-exon	FALSE	canonical	1	1	junction_1	28.3700436199876	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTTTCCTCTTTCAA	NA	False	NA	3	True	AATAAA	-15	NA	17103023	17201297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17103068_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.10	chr19	+	4187	10	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	35.5520831637747	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTTTCCTCTTTCAA	NA	False	NA	3	True	AATAAA	-15	NA	17114133	17201297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17189655_17189695_17198147
ES.17492.11	chr19	+	1884	9	NNC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	-4	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.6455624841223	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATAGCTCATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	17114134	17199026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170802_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.12	chr19	+	1155	8	ISM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	5	13097	-4	-1644	5prime_fragment	FALSE	canonical	3	57	junction_3	14.2427926635594	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGCTATTCTTTCAG	NA	False	NA	9	True	AATAAA	-21	NA	17114134	17185851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594
ES.17492.13	chr19	+	7403	6	NIC	ENSMUSG00000039126.11	novel	1803	9	NA	NA	-4	-1644	intron_retention	FALSE	canonical	3	57	junction_3	14.9746452378679	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGCTATTCTTTCAG	NA	False	NA	9	True	AATAAA	-21	NA	17114134	17185851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17177277_17179005_17179093_17185594
ES.17492.14	chr19	+	4188	10	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	34.3913569388991	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGGTTTCCTCTTTC	NA	False	NA	1	True	AATAAA	-13	NA	17114139	17201295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17193689_17193738_17198147
ES.17492.15	chr19	+	4760	1	Genic_Genomic	ENSMUSG00000039126.11	novel	NA	NA	NA	NA	4882	23	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAAACTCTCTGTGGCT	NA	False	NA	25	True	AATAAA	-37	NA	17196559	17201319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_17196600_17201300
ES.17492.2	chr19	+	3990	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	24.5165500119775	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGGTTTCCTCTTTC	NA	False	NA	1	True	AATAAA	-13	NA	17114115	17201295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.3	chr19	+	4188	9	FSM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	-12	-2373	-12	25	multi-exon	FALSE	canonical	3	57	junction_3	14.3352711868315	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAACTCTCTGTGGCTTC	NA	False	NA	27	True	AATAAA	-39	NA	17114117	17201321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.4	chr19	+	1795	9	NNC	ENSMUSG00000039126.11	novel	1803	9	NA	NA	-5	18644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.6226264871973	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	17114124	17219940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17219152
ES.17492.5	chr19	+	3878	7	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	32.9949491084115	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGGTTTCCTCTTTC	NA	False	NA	1	True	AATAAA	-13	NA	17114124	17201295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.6	chr19	+	3658	5	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.1814688341313	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGGTTTCCTCTTTC	NA	False	NA	1	True	AATAAA	-13	NA	17114125	17201295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17185594_17185694_17198147
ES.17492.7	chr19	+	4178	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	201	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	24.5165500119775	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAACTGTCCCCTCATT	NA	False	NA	NA	False	TTTAAA	-16	NA	17114129	17201497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.8	chr19	+	4160	9	NNC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.6455624841223	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGTTTCCTCTTTCAA	NA	False	NA	3	True	AATAAA	-15	NA	17114129	17201297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170802_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17492.9	chr19	+	4047	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.834647885197	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGGTTTCCTCTTTC	NA	False	NA	1	True	AATAAA	-13	NA	17114129	17201295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ES.17493.1	chr19	-	4598	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	8	0	8	0	multi-exon	FALSE	canonical	3	31	junction_2	7	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGTCTGCACACATTA	8042	False	NA	2	True	AATAAA	-21	NA	17334023	17303504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_17307853_17310473_17310621_17333920
ES.17493.2	chr19	-	4579	3	NNC	ENSMUSG00000038843.19	novel	4606	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.5	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTATGTCTGCACACATT	8036	False	NA	1	True	AATAAA	-20	NA	17334029	17303505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_17307853_17310473_17310597_17333920
ES.17493.3	chr19	-	4871	5	NNC	ENSMUSG00000038843.19	novel	4594	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.2142525225417	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTGCACACAT	8042	False	NA	0	True	AATAAA	-19	NA	17334023	17303506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_17307853_17310473_17310621_17316831_17316953_17320248_17320403_17333920
ES.17493.4	chr19	-	4737	4	NNC	ENSMUSG00000038843.19	novel	4606	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.94993734326	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTGCACACAT	8043	False	NA	0	True	AATAAA	-19	NA	17334022	17303506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_17307853_17310473_17310621_17313562_17313705_17333920
ES.17493.5	chr19	-	2134	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	-3	2475	-3	53	multi-exon	FALSE	canonical	3	31	junction_2	7	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTATCCTTGTAAATAAT	8031	False	NA	NA	False	AATAGA	-17	NA	17334034	17305979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_17307853_17310473_17310621_17333920
ES.17493.6	chr19	-	2493	3	NNC	ENSMUSG00000038843.19	novel	4606	3	NA	NA	79	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCACAAAGATATGATTCA	8113	False	NA	NA	False	AATAAA	-16	NA	17333952	17306038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_17307853_17310473_17310621_17333420
ES.17494.1	chr19	+	1644	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	-27	865	-27	523	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGAAATGAACATAGCCA	1297	False	NA	26	True	AATAAA	-28	NA	17371379	17377848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ES.17494.3	chr19	+	2496	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	-10	-4	-10	4	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTATCTGTTTGGGG	1314	False	NA	23	True	AATAAA	-38	NA	17371396	17378717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ES.17494.4	chr19	+	1002	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	3	1477	3	14	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGACTGACCATAG	1327	False	NA	19	True	AATAAA	-37	NA	17371409	17377236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ES.17494.5	chr19	+	5705	3	NIC	ENSMUSG00000024712.10	novel	2482	4	NA	NA	5	0	intron_retention	FALSE	canonical	3	326	junction_2	57	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATCCTGTATCTGTTT	1329	False	NA	19	True	AATAAA	-34	NA	17371411	17378713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_17371757_17372561_17376045_17376836
ES.17494.7	chr19	+	3840	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	72	-1430	72	1430	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGTATTAAACCATAAT	1396	False	NA	NA	False	NA	NA	NA	17371478	17380143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ES.17494.8	chr19	+	1405	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	72	1005	72	383	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTGTGACTTTGGT	1396	False	NA	NA	False	NA	NA	NA	17371478	17377708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ES.17495.1	chr19	+	196	1	Intergenic	novelGene_14497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAAGAGTGAGCTGA	NA	False	NA	NA	False	NA	NA	NA	17387262	17387458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_17387300_17387500
ES.17496.1	chr19	-	3331	21	FSM	ENSMUSG00000024713.17	ENSMUST00000050715.10	5768	21	-28	2465	-28	2089	multi-exon	FALSE	canonical	0	0	junction_6	1.83303027798234	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAAGCCACCTCTCTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	17815024	17538002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_17538194_17541145_17541262_17542073_17542204_17542631_17542730_17545632_17545718_17549787_17549982_17553169_17553273_17558499_17558644_17563373_17563511_17571903_17572093_17573024_17573143_17595014_17595119_17619856_17619958_17632051_17632265_17652784_17652958_17655832_17655922_17689278_17689356_17692121_17692266_17729426_17729541_17770992_17771098_17814318
ES.17497.1	chr19	-	3857	1	Intergenic	novelGene_14498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTCTTCTGCATCA	NA	False	NA	NA	False	ATTAAA	-18	NA	18544077	18540220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_18540200_18544100
ES.17498.1	chr19	+	181	1	Intergenic	novelGene_14499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18566417	18566598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_18566400_18566600
ES.17499.1	chr19	-	5569	1	NIC	ENSMUSG00000024725.14	novel	974	11	NA	NA	46826	4	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTCACTGTGTT	5782	False	NA	NA	False	TTTAAA	-8	NA	18562256	18556687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18556700_18562300
ES.17499.10	chr19	-	1215	10	NNC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	-5	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	343.986756851029	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAACATTTAAAGAG	NA	False	NA	-31	True	AATAGA	-38	NA	18609158	18558201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608983
ES.17499.11	chr19	-	1229	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-109	1606	-75	58	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATGAGATGTTTTGAG	NA	False	NA	56	True	TTTAAA	-30	NA	18609262	18558297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.12	chr19	-	4140	9	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	989	junction_2	44.7993791809663	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTAATAGTTTTTTT	NA	False	NA	-2	True	AATAAA	-34	NA	18609152	18558355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558693_18562005_18562108_18563910_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.13	chr19	-	980	10	NNC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	23563	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	342.738679563798	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTGTAATAGTTTTT	4226	False	NA	-4	True	AATAAA	-32	NA	18585519	18558357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18585429
ES.17499.14	chr19	-	1033	10	NNC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	343.986756851029	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATTGTAATAGTTTT	NA	False	NA	-5	True	AATAAA	-31	NA	18609133	18558358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581565_18608977
ES.17499.15	chr19	-	1084	10	NNC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	347.679219261337	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAATTGTAATAGTTT	NA	False	NA	-6	True	AATAAA	-30	NA	18609191	18558359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_18558693_18562005_18562096_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.17	chr19	-	750	5	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	12	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	470.502590322306	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAAGGAATTGTAATAG	NA	False	NA	-9	True	AATAAA	-27	NA	18609175	18558362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558693_18562005_18562108_18563910_18563990_18581529_18581577_18608983
ES.17499.18	chr19	-	3749	8	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	-24	-8	intron_retention	FALSE	canonical	3	989	junction_2	47.7177073195762	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTAAAGGAATTGTAATA	NA	False	NA	-10	True	AATAAA	-26	NA	18609128	18558363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.19	chr19	-	476	5	ISM	ENSMUSG00000024725.14	ENSMUST00000236728.2	1322	11	41322	342	41251	-159	3prime_fragment	FALSE	canonical	3	989	junction_2	52.3330679398791	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCTGCACTGTGATCT	207	False	NA	NA	False	TTTAAA	-16	NA	18567831	18558514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764
ES.17499.2	chr19	-	2753	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-33	6	1	-6	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTCTAATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	18609186	18556697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.3	chr19	-	1405	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-106	1427	-72	54	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCGATTCGATGTTAC	NA	False	NA	-3	True	AATAAA	-18	NA	18609259	18558118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.4	chr19	-	6236	3	ISM	ENSMUSG00000024725.14	ENSMUST00000236728.2	1322	11	39626	3	39555	-3	intron_retention	FALSE	canonical	3	989	junction_2	73	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGTTTTTGTGCTATC	NA	False	NA	-5	True	AATAAA	-18	NA	18569527	18558175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_18558693_18562005_18562108_18563910
ES.17499.5	chr19	-	894	5	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	470.502590322306	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTTTTTGTGCTAT	NA	False	NA	-6	True	AATAAA	-17	NA	18609133	18558176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558693_18562005_18562108_18563910_18563990_18581529_18581577_18608983
ES.17499.7	chr19	-	1442	1	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	49463	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCTGTTTTTGTGCTA	8419	False	NA	-7	True	AATAAA	-16	NA	18559619	18558177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558200_18559600
ES.17499.8	chr19	-	1155	9	NIC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	-24	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	362.602550149609	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTATTATCTGTTTTT	NA	False	NA	-13	True	AATAAA	-10	NA	18609128	18558183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ES.17499.9	chr19	-	1235	10	NNC	ENSMUSG00000024725.14	novel	2726	10	NA	NA	13	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	457.657805206758	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATTTTATTATCTGT	NA	False	NA	-17	True	AATAAA	-6	NA	18609174	18558187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_18558693_18562005_18562096_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573762_18581529_18581577_18608983
ES.175.1	chr1	-	525	4	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_3	28.3901391331568	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTTGTGAGATCTTTG	NA	False	NA	-5	True	ATTAAA	-17	NA	21326468	21323507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_21323669_21324392_21324563_21326110_21326225_21326388
ES.1750.1	chr1	-	8317	20	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	34200	-2	-1133	2	3prime_fragment	FALSE	canonical	3	77	junction_1	24.5768623030854	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGTCTGCAATGGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	162533894	162498291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.10	chr1	-	10232	35	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_31	43.0044658500136	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGGAACTTCTAATCT	3435	False	NA	NA	False	AATAAA	-18	NA	162568104	162499354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.11	chr1	-	9063	18	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-1431	-1	intron_retention	FALSE	canonical	3	85	junction_14	23.6167496716187	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGGAACTTCTAATCT	NA	False	NA	NA	False	AATAAA	-18	NA	162534192	162499354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.14	chr1	-	10148	34	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	42.5520153794839	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	3415	False	NA	NA	False	AATAAA	-16	NA	162568124	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.16	chr1	-	9943	34	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_31	42.9728169145576	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	162552377	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550851_162552272
ES.1750.17	chr1	-	9932	32	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_10	43.7360829655992	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	3476	False	NA	NA	False	AATAAA	-16	NA	162568063	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.18	chr1	-	8274	21	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-3736	0	intron_retention	FALSE	canonical	3	59	junction_20	28.4216466799515	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	162536497	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421
ES.1750.19	chr1	-	9982	33	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_11	43.5706592072004	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	3473	False	NA	NA	False	AATAAA	-16	NA	162568066	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.2	chr1	-	8478	24	ISM	ENSMUSG00000040225.16	ENSMUST00000182660.8	11502	35	30157	1057	3617	1	3prime_fragment	FALSE	canonical	3	17	junction_1	40.4419815938375	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGAACTTCTAATCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	162537968	162499352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162501226_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851
ES.1750.20	chr1	-	6736	21	NIC	ENSMUSG00000040225.16	novel	6367	21	NA	NA	-365	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	41.0115532502733	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	162533126	162499356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.21	chr1	-	7040	19	NNC	ENSMUSG00000040225.16	novel	6367	21	NA	NA	-993	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.1286655680436	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGTCTTGGAACTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	162533754	162499359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511844_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.22	chr1	-	10210	35	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_31	42.2805856614526	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGTCTTGGAACTTCT	3443	False	NA	NA	False	AATAAA	-13	NA	162568096	162499359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.23	chr1	-	10121	34	NNC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_15	45.1406942494092	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGTCTTGGAACTTCT	3476	False	NA	NA	False	AATAAA	-13	NA	162568063	162499359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523930_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.24	chr1	-	10192	34	NIC	ENSMUSG00000040225.16	novel	11502	35	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_25	41.8465867517673	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGTCTTGGAACTTCT	3423	False	NA	NA	False	AATAAA	-13	NA	162568116	162499359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.25	chr1	-	10243	35	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_33	41.6801546796272	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGTCTTGGAACTTCT	3419	False	NA	NA	False	AATAAA	-13	NA	162568120	162499359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.27	chr1	-	2703	7	NNC	ENSMUSG00000040225.16	novel	5448	17	NA	NA	7398	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3006036389611	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGAGTCTTGGAACT	NA	False	NA	NA	False	AATAAA	-10	NA	162508360	162499362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162501226_162504241_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328
ES.1750.28	chr1	-	9370	24	NNC	ENSMUSG00000040225.16	novel	11502	35	NA	NA	3207	-6	intron_retention	FALSE	canonical	1	1	junction_23	43.9958753866734	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGAGTCTTGGAACT	NA	False	NA	NA	False	AATAAA	-10	NA	162538378	162499362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537253_162537851
ES.1750.3	chr1	-	10192	34	FSM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	-66	-1104	3	0	multi-exon	FALSE	canonical	3	17	junction_32	42.623622398965	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAACTTCTAATCTA	3423	False	NA	NA	False	AATAAA	-19	NA	162568116	162499353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.32	chr1	-	3356	14	ISM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	47727	-676	-4565	-425	3prime_fragment	FALSE	canonical	3	53	junction_1	27.1996780349897	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAACTGTGCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	162520323	162499781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304
ES.1750.33	chr1	-	4952	20	NIC	ENSMUSG00000040225.16	novel	6367	21	NA	NA	2530	-426	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	39.1195341247631	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAACTGTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	162529805	162499782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750
ES.1750.34	chr1	-	7132	24	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	30200	2147	3691	17	3prime_fragment	FALSE	canonical	3	42	junction_23	32.3499882400355	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTGAGCAGATGATTGA	NA	False	NA	NA	False	AATAAA	-33	NA	162537894	162500440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851
ES.1750.36	chr1	-	9319	35	NIC	ENSMUSG00000040225.16	novel	11502	35	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_31	45.0063817081941	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCCCCTCTTCCTGGAT	3419	False	NA	NA	False	AATAAA	-15	NA	162568120	162500458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.37	chr1	-	5156	21	NIC	ENSMUSG00000040225.16	novel	8815	35	NA	NA	-613	-199	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	38.1867450825545	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAACAAACAGATAGGAG	NA	False	NA	NA	False	NA	NA	NA	162533374	162501169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.38	chr1	-	8474	34	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	-9	-546	combination_of_known_junctions	FALSE	canonical	3	7	junction_30	42.9004870675568	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAATCGGCAGCAATG	3464	False	NA	NA	False	AATAAA	-30	NA	162568075	162501516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.39	chr1	-	7211	26	ISM	ENSMUSG00000040225.16	ENSMUST00000028016.16	8815	35	21662	4667	-4872	-4667	internal_fragment	FALSE	canonical	3	34	junction_22	38.766872455745	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGAGGATTAATCCCT	2057	False	NA	NA	False	NA	NA	NA	162546457	162505637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258
ES.1750.4	chr1	-	10266	35	NIC	ENSMUSG00000040225.16	novel	11289	35	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	40.977597474836	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAACTTCTAATCTA	3423	False	NA	NA	False	AATAAA	-19	NA	162568116	162499353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.40	chr1	-	3187	15	NIC	ENSMUSG00000040225.16	novel	9022	34	NA	NA	139	-4720	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	35.0676459991025	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCACAAGCACAGGCTC	NA	False	NA	NA	False	NA	NA	NA	162532196	162505690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ES.1750.42	chr1	-	7895	31	NNC	ENSMUSG00000040225.16	novel	8815	35	NA	NA	3	-4743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	42.8720188467956	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGCCCCAGTTACAGCA	3476	False	NA	NA	False	NA	NA	NA	162568063	162505713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536675_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.43	chr1	-	156	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	162513369	162513213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_162513200_162513400
ES.1750.44	chr1	-	5269	16	ISM	ENSMUSG00000040225.16	ENSMUST00000028016.16	8815	35	19007	24357	3325	12608	internal_fragment	FALSE	canonical	3	34	junction_10	22.6582337254155	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCAGCCTCAGCCCCAA	NA	False	NA	NA	False	NA	NA	NA	162549112	162525327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998
ES.1750.45	chr1	-	5817	17	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	8	30772	8	8870	5prime_fragment	FALSE	canonical	3	34	junction_8	15.6838890266413	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATCTCAGACATTGTT	3453	False	NA	NA	False	ATTAAA	-17	NA	162568086	162529065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.46	chr1	-	2949	16	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	-2	35628	-2	4014	5prime_fragment	FALSE	canonical	3	34	junction_7	8.53593710275692	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTTCTCATGGATCT	3443	False	NA	NA	False	NA	NA	NA	162568096	162533921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.5	chr1	-	10409	35	NNC	ENSMUSG00000040225.16	novel	11502	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.6232597904844	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAACTTCTAATCTA	3445	False	NA	NA	False	AATAAA	-19	NA	162568094	162499353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_162501226_162503173_162503407_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162549013_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.6	chr1	-	10251	35	FSM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	-22	1060	3	0	multi-exon	FALSE	canonical	3	34	junction_26	40.8981454897196	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAACTTCTAATCTA	3423	False	NA	NA	False	AATAAA	-19	NA	162568116	162499353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ES.1750.7	chr1	-	10442	36	NIC	ENSMUSG00000040225.16	novel	8815	35	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	43.9645125908037	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGGAACTTCTAATCTA	3463	False	NA	NA	False	AATAAA	-19	NA	162568076	162499353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162501226_162501667_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ES.1750.9	chr1	-	7028	15	NIC	ENSMUSG00000040225.16	novel	6367	21	NA	NA	7082	-1	intron_retention	FALSE	canonical	3	19	junction_1	38.4180150131552	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGGAACTTCTAATCT	NA	False	NA	NA	False	AATAAA	-18	NA	162525253	162499354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_162503411_162504259_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001
ES.17500.1	chr19	+	2007	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	-30	-37	-30	37	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTCAGTTGTCATT	NA	False	NA	NA	False	AATATA	-14	NA	18609283	18629829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ES.17500.2	chr19	+	1704	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	-10	246	-10	-12	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAAGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	18609303	18629546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ES.17500.3	chr19	+	1273	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	-6	673	-6	-172	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTCTCATAGTAAT	NA	False	NA	NA	False	AATATA	-8	NA	18609307	18629119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ES.17500.4	chr19	+	1347	10	NNC	ENSMUSG00000037847.15	novel	1768	10	NA	NA	2	-215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.7011340632	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTTCATTTTGTTTG	NA	False	NA	NA	False	AATGAA	-28	NA	18609315	18629076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618577_18618766_18618839_18619537_18619645_18622418_18622503_18625715_18625900_18628599
ES.17500.5	chr19	+	4600	9	NNC	ENSMUSG00000037847.15	novel	1768	10	NA	NA	-1	-228	intron_retention	FALSE	canonical	2	9	junction_8	26.6587227751068	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTTTTTTTCCAGTT	NA	False	NA	NA	False	AATGAA	-15	NA	18609321	18629063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18625900_18628599
ES.17501.1	chr19	-	2322	1	Intergenic	novelGene_14500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18636423	18634101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_18634100_18636400
ES.17502.1	chr19	+	4783	9	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-6632	-528	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	419.487112436127	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTTGTTTCCCTCAA	9502	False	NA	11	True	ATTAAA	-22	NA	18641495	18684036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18642120_18647958_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.10	chr19	+	2994	4	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-26	-1012	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	490.426345132478	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTCACTGGAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	18648101	18683552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18681383
ES.17502.11	chr19	+	2087	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-23	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.884984630873	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATAATTTCGAATTA	NA	False	NA	NA	False	AATAAA	-14	NA	18648104	18682146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671048_18671127_18680724_18680829_18681383
ES.17502.12	chr19	+	2302	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-23	2239	-23	739	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTGTGTTCTGTGTC	NA	False	NA	NA	False	TATAAA	-15	NA	18648104	18682325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.13	chr19	+	3602	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-23	939	-23	-939	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAATTTTTTTTCTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	18648104	18683625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.14	chr19	+	804	3	ISM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-17	27945	-17	1460	5prime_fragment	FALSE	canonical	3	795	junction_1	195	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGAGATGGTAAATAT	NA	False	NA	NA	False	ATTAAA	-21	NA	18648110	18656619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_18648567_18655051_18655248_18656467
ES.17502.15	chr19	+	2006	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-12	558	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	440.453554115906	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATACATAATTTCGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	18648115	18682144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18681383
ES.17502.16	chr19	+	4284	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-11	245	-11	-245	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCAAGAAGAGCAGTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	18648116	18684319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.17	chr19	+	3479	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-9	-1012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.884984630873	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTCACTGGAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	18648118	18683552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671048_18671127_18680724_18680829_18681383
ES.17502.18	chr19	+	1678	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-7	2847	-7	131	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTATCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	18648120	18681717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.19	chr19	+	2364	8	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-5	586	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAAAGCTTGTCGTGT	NA	False	NA	NA	False	AATAAA	-40	NA	18648122	18682172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.2	chr19	+	2923	9	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-6632	590	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	419.487112436127	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTTGTCGTGTGATG	9502	False	NA	NA	False	AATAAA	-44	NA	18641495	18682176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18642120_18647958_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.20	chr19	+	1858	6	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-3	560	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	454.978065405356	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATAATTTCGAATTA	NA	False	NA	NA	False	AATAAA	-14	NA	18648124	18682146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18668780_18668960_18671012_18671127_18681383
ES.17502.21	chr19	+	3505	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-3	-1027	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.884984630873	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGGT	NA	False	NA	NA	False	NA	NA	NA	18648124	18683537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668971_18671012_18671127_18680724_18680829_18681383
ES.17502.22	chr19	+	1816	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-3	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	519.054320620783	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTATTGCGAGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	18648124	18681827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18668780_18668960_18671012_18671127_18675007_18675181_18680724_18680829_18681383
ES.17502.23	chr19	+	3951	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-3	-534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.884984630873	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTTCTTGGTTGTTTC	NA	False	NA	5	True	ATTAAA	-16	NA	18648124	18684030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671048_18671127_18680724_18680829_18681383
ES.17502.24	chr19	+	629	2	ISM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	1	29322	1	83	5prime_fragment	FALSE	canonical	3	795	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTATGTGACATTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	18648128	18655242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_18648567_18655051
ES.17502.26	chr19	+	2388	8	FSM	ENSMUSG00000024726.11	ENSMUST00000235736.2	1714	8	-114	-560	1	560	multi-exon	FALSE	canonical	1	1	junction_1	444.181981459245	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATAATTTCGAATTA	NA	False	NA	NA	False	AATAAA	-14	NA	18648128	18682146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648856_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.27	chr19	+	4220	8	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	1	-530	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTTGTTTCCCTC	NA	False	NA	9	True	ATTAAA	-20	NA	18648128	18684034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.28	chr19	+	4000	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	11	-529	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	436.561377969575	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTTGTTTCCCTCA	NA	False	NA	10	True	ATTAAA	-21	NA	18648138	18684035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18670990_18671127_18680724_18680829_18681383
ES.17502.29	chr19	+	3854	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	27	-533	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	440.453554115906	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTCTTGGTTGTTTCC	NA	False	NA	6	True	ATTAAA	-17	NA	18648154	18684031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18681383
ES.17502.3	chr19	+	4846	9	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-6631	-536	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	419.770603276361	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACAGTTCTTGGTTGTT	9503	False	NA	3	True	ATTAAA	-14	NA	18641496	18684028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18642192_18647958_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.30	chr19	+	3817	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	27	-533	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	429.225432869748	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTCTTGGTTGTTTCC	NA	False	NA	6	True	ATTAAA	-17	NA	18648154	18684031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.31	chr19	+	2102	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	34	585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.884984630873	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACAAAGCTTGTCGTG	NA	False	NA	NA	False	AATAAA	-39	NA	18648161	18682171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668971_18671012_18671127_18680724_18680829_18681383
ES.17502.32	chr19	+	3701	8	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	38	-1012	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTCACTGGAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	18648165	18683552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.35	chr19	+	2057	8	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-52	564	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	441.501981875506	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAATTTCGAATTAGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	18648190	18682150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680708_18680829_18681383
ES.17502.36	chr19	+	4124	9	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-45	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	420.054163174227	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGTTTCAAGAAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	18648197	18684312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383_18681568_18681639
ES.17502.37	chr19	+	1463	4	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-44	532	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	490.426345132478	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAGAATAAAATCTG	NA	False	NA	NA	False	TATAAA	-19	NA	18648198	18682118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18681383
ES.17502.38	chr19	+	3438	5	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-2	-533	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	499.72911412084	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTCTTGGTTGTTTCC	NA	False	NA	6	True	ATTAAA	-17	NA	18648240	18684031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18680724_18680829_18681383
ES.17502.39	chr19	+	760	2	ISM	ENSMUSG00000024726.11	ENSMUST00000235736.2	1714	8	44	26344	44	83	5prime_fragment	FALSE	canonical	1	1	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTATGTGACATTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	18648286	18655242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_18648856_18655051
ES.17502.4	chr19	+	2676	10	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-6629	581	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	496.148947169877	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAATTACAAAGCTTGT	9505	False	NA	NA	False	AATAAA	-35	NA	18641498	18682167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18641758_18642064_18642192_18647958_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.40	chr19	+	4176	9	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-201	5576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	420.054163174227	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGACTTATTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	18648491	18690140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383_18684558_18690111
ES.17502.41	chr19	+	3364	8	FSM	ENSMUSG00000024726.11	ENSMUST00000235736.2	1714	8	301	-1951	-149	-1027	multi-exon	FALSE	canonical	1	1	junction_1	444.181981459245	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGGT	NA	False	NA	NA	False	NA	NA	NA	18648543	18683537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648856_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.42	chr19	+	4288	8	NNC	ENSMUSG00000024726.11	novel	1714	8	NA	NA	-85	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	541.700195717905	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTCACAGCTTCACT	NA	False	NA	17	True	NA	NA	NA	18648607	18684565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680708_18680829_18681383
ES.17502.43	chr19	+	1533	7	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	7778	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	595.322158349765	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATAATTTCGAATTA	NA	False	NA	NA	False	AATAAA	-14	NA	18656470	18682146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18656632_18659337_18659387_18667593_18667735_18668780_18668960_18670990_18671127_18680724_18680829_18681383
ES.17502.44	chr19	+	2753	2	ISM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	32596	533	32031	-533	3prime_fragment	FALSE	canonical	3	1263	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTCTTGGTTGTTTCC	9528	False	NA	6	True	ATTAAA	-17	NA	18680723	18684031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_18680829_18681383
ES.17502.5	chr19	+	2285	10	NNC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-6598	293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	495.959476640114	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTTTATTTTATTT	9536	False	NA	NA	False	AATAGA	-26	NA	18641529	18681879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18641758_18642064_18642120_18647958_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.6	chr19	+	1593	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-56	2981	-56	-3	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGTGGTGCCTTCTTA	NA	False	NA	NA	False	AATAAA	-42	NA	18648071	18681583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.7	chr19	+	3297	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-44	1265	-44	-1265	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAAGTTACTATATT	NA	False	NA	NA	False	TATAAA	-24	NA	18648083	18683299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.8	chr19	+	4558	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	-38	-2	-38	2	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCACAGCTTCACTC	NA	False	NA	18	True	NA	NA	NA	18648089	18684566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ES.17502.9	chr19	+	3430	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-28	-1012	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	440.453554115906	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTCACTGGAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	18648099	18683552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18681383
ES.17503.1	chr19	-	2362	2	Antisense	novelGene_ENSMUSG00000024726.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCCCCAAGGATAGAAG	NA	False	NA	NA	False	NA	NA	NA	18662310	18658574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_18660710_18662083
ES.17503.2	chr19	-	171	1	Intergenic	novelGene_14501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATAAATAAGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	18660864	18660693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_18660700_18660900
ES.17504.1	chr19	-	4235	1	Antisense	novelGene_ENSMUSG00000024726.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTAATGAAGAATTGAGAA	NA	False	NA	NA	False	NA	NA	NA	18688350	18684115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_18684100_18688400
ES.17505.1	chr19	+	3142	2	NNC	ENSMUSG00000047044.8	novel	1677	2	NA	NA	-33	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGTATTGGATTCTT	9281	False	NA	43	True	AATAAA	-36	NA	18690523	18695809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18691515_18693658
ES.17505.2	chr19	+	1713	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	-29	-7	-29	7	multi-exon	FALSE	canonical	3	347	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGTGACTAATTTTGTA	9285	False	NA	33	True	AATAAA	-26	NA	18690527	18695799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_18691024_18694582
ES.17505.4	chr19	+	3117	2	NNC	ENSMUSG00000047044.8	novel	1677	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	9293	False	NA	26	True	AATAAA	-19	NA	18690535	18695792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_18691504_18693643
ES.17505.5	chr19	+	5224	1	NIC	ENSMUSG00000047044.8	novel	1677	2	NA	NA	10	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTATGTATCAGTGACT	9324	False	NA	24	True	AATAAA	-17	NA	18690566	18695790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18690600_18695800
ES.17506.1	chr19	+	159	1	Intergenic	novelGene_14502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	18697374	18697533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_18697400_18697500
ES.17507.1	chr19	+	176	1	Intergenic	novelGene_14503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	18701369	18701545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_18701400_18701500
ES.17508.1	chr19	+	5117	24	NIC	ENSMUSG00000024727.10	novel	3548	19	NA	NA	-4	9883	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	1.41019780349799	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGCGTGTGTGGTGTA	3243	False	NA	NA	False	NA	NA	NA	18735984	18811672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_18736047_18749684_18749759_18754056_18754096_18755883_18756062_18760403_18760618_18761137_18761263_18764037_18764210_18769349_18769519_18770199_18770324_18773616_18773690_18773804_18773906_18778298_18778434_18779512_18779567_18786895_18787037_18789042_18789178_18790712_18790994_18792604_18792834_18796401_18796555_18800696_18800844_18803114_18803244_18804734_18804987_18807194_18807370_18807568_18807684_18809832
ES.17508.2	chr19	+	5063	28	ISM	ENSMUSG00000024727.10	ENSMUST00000040489.9	6509	39	51066	3	-39588	-3	3prime_fragment	FALSE	canonical	0	0	junction_2	1.17004214806899	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCGTTTGAAGACTTT	2235	False	NA	NA	False	AATAAA	-14	NA	18778412	18869872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_18778434_18779512_18779567_18786895_18787037_18789042_18789178_18790712_18790994_18792604_18792834_18796401_18796555_18800696_18800844_18803114_18803244_18804734_18804987_18807194_18807370_18807568_18807684_18809832_18810027_18815336_18815470_18830690_18831833_18833518_18833629_18839534_18839653_18843561_18843654_18845317_18845377_18847863_18847890_18849575_18849627_18851192_18851259_18853199_18853487_18854116_18854200_18854930_18855137_18861263_18861316_18866298_18866406_18869367
ES.17509.1	chr19	-	205	1	Intergenic	novelGene_14504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTTAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	19115141	19114936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_19114900_19115100
ES.1751.1	chr1	+	181	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGGGGTGAATT	NA	False	NA	NA	False	NA	NA	NA	162607950	162608131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_162608000_162608100
ES.17510.1	chr19	-	180	1	Intergenic	novelGene_14505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGGATTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	19473370	19473190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_19473200_19473400
ES.17511.1	chr19	+	176	1	Intergenic	novelGene_14506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACATCAGTTATAG	NA	False	NA	NA	False	NA	NA	NA	19681444	19681620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_19681400_19681600
ES.17512.1	chr19	-	177	1	Intergenic	novelGene_14507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATTTATT	NA	False	NA	NA	False	NA	NA	NA	20126987	20126810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_20126800_20127000
ES.17513.1	chr19	-	175	1	Intergenic	novelGene_14508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	20184494	20184319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_20184300_20184500
ES.17514.1	chr19	-	1401	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	271	2	0	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTGTCATTGTCTC	7276	False	NA	0	True	AATAAA	-21	NA	20368037	20350793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ES.17515.1	chr19	-	204	1	Intergenic	novelGene_14509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATCAAAATAGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	20399035	20398831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_20398800_20399000
ES.17516.1	chr19	-	220	1	Intergenic	novelGene_14510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-23	NA	20900636	20900416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_20900400_20900600
ES.17517.1	chr19	+	3012	6	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-442	-264	intron_retention	FALSE	non_canonical	0	0	junction_1	149.054889218704	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249199	21259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21249209_21249601_21250107_21253789_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.10	chr19	+	3258	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	10	4117	10	433	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTGGACTGA	NA	False	NA	NA	False	NA	NA	NA	21249651	21260087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.11	chr19	+	1485	4	NIC	ENSMUSG00000024750.12	novel	465	5	NA	NA	11	-1	intron_retention	FALSE	canonical	3	19	junction_2	162.829836195814	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTCCAGAGTTTTGCT	NA	False	NA	NA	False	ATTAAA	-28	NA	21249652	21258027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21250107_21253789_21254454_21256988_21257115_21257786
ES.17517.12	chr19	+	5267	4	FSM	ENSMUSG00000024750.12	ENSMUST00000141568.2	1582	4	-3691	6	11	-6	multi-exon	FALSE	canonical	3	378	junction_3	0.816496580927726	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATGTTCTCCAGAGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	21249652	21258022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.13	chr19	+	3117	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	11	4257	11	293	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTATTGAACAGTAGT	NA	False	NA	NA	False	ATTAAA	-24	NA	21249652	21259947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.14	chr19	+	2553	6	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	12	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.054889218704	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249653	21259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21250107_21253789_21253950_21254347_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.15	chr19	+	6982	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	12	391	12	-391	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTGTATTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	21249653	21263813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.16	chr19	+	5380	3	NIC	ENSMUSG00000024750.12	novel	465	5	NA	NA	14	-264	intron_retention	FALSE	canonical	3	349	junction_1	14.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249655	21259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21250107_21253789_21257115_21257786
ES.17517.17	chr19	+	2234	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	16	5135	16	-585	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTTTTTGTGATGTAT	NA	False	NA	NA	False	NA	NA	NA	21249657	21259069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.18	chr19	+	1442	6	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.054889218704	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTCCAGAGTTTTGCT	NA	False	NA	NA	False	ATTAAA	-28	NA	21249711	21258027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21250107_21253789_21254254_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.19	chr19	+	2278	7	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	71	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	139.441046882027	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTGTTTATTGGGT	NA	False	NA	17	True	AATAAA	-17	NA	21249712	21259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786_21258181_21258402
ES.17517.2	chr19	+	3897	4	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-442	-12	intron_retention	FALSE	canonical	3	349	junction_1	13.9124245031395	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCTTTGATGTTCTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	21249199	21258016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21250107_21253789_21254454_21255018_21257115_21257786
ES.17517.20	chr19	+	7325	7	NNC	ENSMUSG00000024750.12	novel	2467	6	NA	NA	77	-393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.663246235916	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTTGTGTATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	21250127	21263811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21250707_21250794_21251014_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.21	chr19	+	5313	4	FSM	ENSMUSG00000024750.12	ENSMUST00000141568.2	1582	4	-2370	-1361	364	-265	multi-exon	FALSE	canonical	3	378	junction_3	0.816496580927726	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21250973	21259389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.22	chr19	+	2105	5	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	3179	266	385	-266	3prime_fragment	FALSE	canonical	3	378	junction_4	0.707106781186548	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTTCTTGTTTATTGG	NA	False	NA	15	True	AATAAA	-15	NA	21253788	21259388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.23	chr19	+	5076	1	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	910	-265	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21254313	21259389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21254300_21259400
ES.17517.24	chr19	+	1633	3	ISM	ENSMUSG00000024750.12	ENSMUST00000141568.2	1582	4	1739	-1225	1679	-401	3prime_fragment	FALSE	canonical	3	378	junction_2	1	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTACCTTAGTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	21255082	21259253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21255123_21256988_21257115_21257786
ES.17517.3	chr19	+	2990	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	-417	4812	-417	-262	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGTTTATTGGGTTT	NA	False	NA	19	True	AATAAA	-19	NA	21249224	21259392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.4	chr19	+	1268	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	-61	6178	-61	-2	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTCTCCAGAGTTTTGC	NA	False	NA	NA	False	ATTAAA	-27	NA	21249580	21258026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.5	chr19	+	6927	7	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-18	-392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.441046882027	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTGTGTATTTTTACT	NA	False	NA	NA	False	NA	NA	NA	21249623	21263812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21249847_21249930_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.6	chr19	+	6057	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	-18	1346	-18	-1346	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTGCATTATAACTGG	NA	False	NA	NA	False	AATAAA	-21	NA	21249623	21262858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.7	chr19	+	2700	6	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-16	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	182.455912482989	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTTCTTGTTTATTGG	NA	False	NA	15	True	AATAAA	-15	NA	21249625	21259388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21250107_21250794_21251014_21253789_21253950_21254341_21254454_21256988_21257115_21257786
ES.17517.8	chr19	+	4444	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	2	2939	2	1611	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATGTGTCTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	21249643	21261265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17517.9	chr19	+	4303	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	8	3074	8	1476	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGGCTTTGTTTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	21249649	21261130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ES.17518.1	chr19	-	142	1	ISM	ENSMUSG00000118342.2	ENSMUST00000236886.2	450	3	2752	14	2752	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTATAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	21287895	21287753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_21287800_21287900
ES.17519.1	chr19	+	184	1	Intergenic	novelGene_14511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21417472	21417656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21417500_21417700
ES.1752.1	chr1	+	178	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTAAATTTTGGT	NA	False	NA	NA	False	NA	NA	NA	163162897	163163075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_163162900_163163100
ES.17520.1	chr19	+	177	1	Intergenic	novelGene_14512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGGAAGACGAGG	NA	False	NA	NA	False	NA	NA	NA	21505520	21505697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21505500_21505700
ES.17521.1	chr19	-	172	1	Intergenic	novelGene_14513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCCAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	21528180	21528008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21528000_21528200
ES.17522.1	chr19	-	5398	1	Genic_Genomic	ENSMUSG00000035171.10	novel	NA	NA	NA	NA	21004	3284	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTGGATGCACAATA	NA	False	NA	NA	False	AATACA	-7	NA	21560679	21555281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_21555300_21560700
ES.17523.1	chr19	+	176	1	Intergenic	novelGene_14514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGATATTTA	NA	False	NA	NA	False	NA	NA	NA	21572574	21572750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21572600_21572800
ES.17524.1	chr19	+	2755	5	NNC	ENSMUSG00000047368.5	novel	2259	4	NA	NA	-331	-40	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	67.5240697825598	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTGCCTTTCCTTGAA	NA	False	NA	NA	False	NA	NA	NA	21630217	21662733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21630958_21654359_21654453_21655716_21656187_21658231_21658412_21661461
ES.17524.10	chr19	+	4604	4	NNC	ENSMUSG00000047368.5	novel	1954	2	NA	NA	-5408	1	intron_retention	FALSE	canonical	0	0	junction_1	55.4276304943863	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGTGCTTGTGTGCC	NA	False	NA	13	True	AGTAAA	-16	NA	21652589	21663002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21652865_21654359_21654453_21655716_21658412_21661461
ES.17524.11	chr19	+	3338	2	FSM	ENSMUSG00000047368.5	ENSMUST00000236549.2	1954	2	-2265	881	-2265	-653	multi-exon	FALSE	canonical	3	120	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACGGTTTGAA	2172	False	NA	NA	False	AATAAA	-5	NA	21655732	21662120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21658412_21661461
ES.17524.12	chr19	+	1881	3	ISM	ENSMUSG00000047368.5	ENSMUST00000235332.2	2249	4	25355	-228	-2094	0	3prime_fragment	FALSE	canonical	0	0	junction_1	60	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTGTGCTTGTGTGC	2343	False	NA	12	True	AGTAAA	-15	NA	21655903	21663001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21656187_21658353_21658412_21661461
ES.17524.2	chr19	+	4967	3	NIC	ENSMUSG00000047368.5	novel	2259	4	NA	NA	-320	3	intron_retention	FALSE	canonical	3	120	junction_2	0.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGCTTGTGTGCCTT	NA	False	NA	15	True	AGTAAA	-18	NA	21630228	21663004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21630958_21655716_21658412_21661461
ES.17524.3	chr19	+	2687	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-423	-5	-83	5	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTGTGTGCCTTCT	NA	False	NA	17	True	AGTAAA	-20	NA	21630465	21663006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
ES.17524.4	chr19	+	2419	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-395	235	-55	-7	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAGAAAAATAAA	NA	False	NA	NA	False	AATGAA	-10	NA	21630493	21662766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
ES.17524.5	chr19	+	4784	4	NNC	ENSMUSG00000047368.5	novel	2259	4	NA	NA	-50	-3	intron_retention	FALSE	canonical	2	2	junction_1	54.9322815433289	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTCGGCTGTGCTTGTG	NA	False	NA	9	True	AGTAAA	-12	NA	21630498	21662998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21630958_21654359_21654453_21655716_21658412_21661461
ES.17524.6	chr19	+	2671	5	NNC	ENSMUSG00000047368.5	novel	2259	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	67.5240697825598	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTGTGCTTGTGTGC	NA	False	NA	12	True	AGTAAA	-15	NA	21630569	21663001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21630958_21654359_21654453_21655716_21656187_21658231_21658412_21661461
ES.17524.7	chr19	+	1612	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	-234	881	106	-653	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACGGTTTGAA	NA	False	NA	NA	False	AATAAA	-5	NA	21630654	21662120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
ES.17524.8	chr19	+	3245	1	Intergenic	novelGene_14516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATATAAT	NA	False	NA	NA	False	NA	NA	NA	21635146	21638391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21635100_21638400
ES.17524.9	chr19	+	2152	2	Intergenic	novelGene_14517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	21649322	21651724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21650416_21650665
ES.17525.1	chr19	+	3429	1	Intergenic	novelGene_14518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAACTTGTCATCTTACT	NA	False	NA	NA	False	GATAAA	-2	NA	21669335	21672764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21669300_21672800
ES.17526.1	chr19	+	7043	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-51	-390	-35	390	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTGAGACCTCCCT	NA	False	NA	18	True	ATTAAA	-22	NA	21755670	21836114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.10	chr19	+	6520	25	NNC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	23.3165117936243	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATGTGTATTTGT	NA	False	NA	15	True	AATAAA	-21	NA	21755712	21835686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518_21833758_21833810
ES.17526.11	chr19	+	7082	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	8	-423	6	390	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTGAGACCTCCCT	NA	False	NA	18	True	ATTAAA	-22	NA	21755713	21836114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.12	chr19	+	8703	24	NIC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	20	junction_2	23.9264784393859	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTTGTGAAT	NA	False	NA	19	True	AATAAA	-25	NA	21755717	21835690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.13	chr19	+	6085	24	NIC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	-4	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.8276279999909	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTATGTATGTGTATT	NA	False	NA	12	True	AATAAA	-18	NA	21755717	21835683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.14	chr19	+	4720	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	12	1935	-4	-1935	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAACTTATTTAAT	NA	False	NA	NA	False	AAGAAA	-8	NA	21755717	21833756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.16	chr19	+	6231	24	NNC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	6152	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	22.0978234136742	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21761903	21835691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21761995_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.17	chr19	+	4044	1	Intergenic	novelGene_14521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21765682	21769726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21765700_21769700
ES.17526.18	chr19	+	6190	24	NNC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	13476	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.8593132914965	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21769227	21835691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21769278_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.19	chr19	+	1983	4	ISM	ENSMUSG00000024754.14	ENSMUST00000238079.2	2159	6	18391	-18	18391	18	3prime_fragment	FALSE	canonical	3	59	junction_2	11.323525167642	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTTTAGTCATATAGA	NA	False	NA	NA	False	NA	NA	NA	21774142	21785284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21774832_21775230_21775793_21779225_21779396_21784722
ES.17526.2	chr19	+	6609	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-40	33	-24	0	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21755681	21835691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.21	chr19	+	5326	21	ISM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	19643	212	19597	-212	3prime_fragment	FALSE	canonical	3	59	junction_1	15.8316139417306	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTCCTGAAGGTGAG	NA	False	NA	NA	False	ATTAAA	-14	NA	21775348	21835479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.22	chr19	+	3028	1	NIC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	26486	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	3591	False	NA	NA	False	AGTAAA	-29	NA	21782237	21785265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_21782200_21785300
ES.17526.23	chr19	+	4560	17	ISM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	33424	6	33378	-6	3prime_fragment	FALSE	canonical	3	68	junction_4	15.6484823545288	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTATGTGTATTTG	4324	False	NA	14	True	AATAAA	-20	NA	21789129	21835685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.24	chr19	+	5935	2	Intergenic	novelGene_14523	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGGATGTTAATGGTT	NA	False	NA	NA	False	NA	NA	NA	21813053	21819093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_21816607_21816711
ES.17526.25	chr19	+	2846	2	ISM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	76739	9	76693	-9	3prime_fragment	FALSE	canonical	3	96	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTATGTATGTGTAT	NA	False	NA	11	True	AATAAA	-17	NA	21832444	21835682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_21833127_21833518
ES.17526.3	chr19	+	6329	25	NNC	ENSMUSG00000024754.14	novel	6667	25	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.3165117936243	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTTGTGAAT	NA	False	NA	19	True	AATAAA	-25	NA	21755692	21835690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_21755753_21756020_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.6	chr19	+	4651	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-17	1968	-1	-1935	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAACTTATTTAAT	NA	False	NA	NA	False	AAGAAA	-8	NA	21755704	21833756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.7	chr19	+	5264	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	-17	1355	-1	-1322	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACATAAACCTATTAC	NA	False	NA	NA	False	NA	NA	NA	21755704	21834369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17526.8	chr19	+	6661	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	4	2	2	-2	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATGTGTATTTGTGAA	NA	False	NA	18	True	AATAAA	-24	NA	21755709	21835689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ES.17527.1	chr19	-	1873	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179768.8	962	3	101	-1012	-16	-1	multi-exon	FALSE	canonical	3	207	junction_2	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	613	False	NA	NA	False	AATAAA	-20	NA	21630180	21574676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_21576233_21596472_21596580_21629970
ES.17527.2	chr19	-	1466	3	FSM	ENSMUSG00000035171.10	ENSMUST00000179553.2	942	3	-136	-388	-19	-1	multi-exon	FALSE	canonical	3	15	junction_2	89.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	493	False	NA	NA	False	AATAAA	-20	NA	21630300	21574676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_21575699_21576118_21576233_21629970
ES.17527.3	chr19	-	1584	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	29	1	29	-1	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	482	False	NA	NA	False	AATAAA	-20	NA	21630311	21574676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ES.17527.4	chr19	-	1740	3	NNC	ENSMUSG00000035171.10	novel	86	2	NA	NA	-138238	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	7	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	21768578	21574676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_21576233_21581652_21581683_21768424
ES.17527.5	chr19	-	1321	4	NNC	ENSMUSG00000035171.10	novel	1614	4	NA	NA	-138241	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	88.3377357393518	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGTGTCTTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	21768581	21574678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_21575699_21576118_21576233_21581652_21581683_21768424
ES.17527.6	chr19	-	140	1	Intergenic	novelGene_14515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21633955	21633815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21633800_21634000
ES.17527.7	chr19	-	175	1	Intergenic	novelGene_14519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	21688009	21687834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21687800_21688000
ES.17527.8	chr19	-	173	1	Intergenic	novelGene_14520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	21722186	21722013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21722000_21722200
ES.17528.1	chr19	-	167	1	Intergenic	novelGene_14522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21801110	21800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21800900_21801100
ES.17529.1	chr19	-	1069	1	Intergenic	novelGene_14524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21818393	21817324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21817300_21818400
ES.1753.1	chr1	-	3226	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	26	-714	13	714	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCTGTAACTGTTTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	163231212	163211762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ES.1753.2	chr1	-	2526	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	11	1	-2	-1	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATGGTCTGTCATTTA	NA	False	NA	-2	True	AATAAA	-17	NA	163231227	163212477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ES.1753.4	chr1	-	4609	6	NNC	ENSMUSG00000040124.6	novel	2663	6	NA	NA	1	2	intron_retention	TRUE	canonical	0	0	junction_2	39.5393474908224	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTATGGTCTGTCATTT	NA	False	NA	-3	True	AATAAA	-16	NA	163231237	163212478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163214267_163219978_163221215_163221255_163222262_163222855_163222927_163224376_163224739_163231091
ES.17530.1	chr19	-	176	1	Intergenic	novelGene_14525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTAGCAT	NA	False	NA	NA	False	NA	NA	NA	21830106	21829930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21829900_21830100
ES.17531.1	chr19	-	233	1	Intergenic	novelGene_14526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGCCGCTGTTAGTA	NA	False	NA	NA	False	AAAAAG	-39	NA	21859203	21858970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_21859000_21859200
ES.17532.1	chr19	-	4687	2	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTCTTTGAAACTCTTC	NA	False	NA	NA	False	NA	NA	NA	22705265	22698518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22698544_22700603
ES.17532.10	chr19	-	4705	1	Intergenic	novelGene_14528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAGAAGACCTGCTA	NA	False	NA	NA	False	NA	NA	NA	22705268	22700563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_22700600_22705300
ES.17532.11	chr19	-	1780	1	Intergenic	novelGene_14529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2941	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGGTTTTGCTTCTC	NA	False	NA	NA	False	NA	NA	NA	22705267	22703487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_22703500_22705300
ES.17532.2	chr19	-	5443	1	Intergenic	novelGene_14527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	22705277	22699834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_22699800_22705300
ES.17532.3	chr19	-	5176	3	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	22705270	22699835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22700558_22700772_22704734_22704777
ES.17532.4	chr19	-	5178	3	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	22705271	22699835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22700552_22700765_22704734_22704777
ES.17532.6	chr19	-	5169	3	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	22705268	22699838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22700547_22700761_22704724_22704769
ES.17532.7	chr19	-	914	3	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	11	3427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	22705162	22699840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22700552_22700765_22700850_22705043
ES.17532.9	chr19	-	5166	3	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	22705267	22699841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22700552_22700765_22704748_22704793
ES.17533.1	chr19	+	7852	6	NNC	ENSMUSG00000052387.17	novel	12305	25	NA	NA	150316	11	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGGTCTTCTTCACC	6401	False	NA	NA	False	AAGAAA	-4	NA	22894313	22967259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_22894388_22895966_22896219_22903259_22903435_22955655_22955807_22955919_22960080_22964219
ES.17534.1	chr19	+	1327	1	Intergenic	novelGene_14532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTACCCTGCAACATAA	NA	False	NA	NA	False	NA	NA	NA	23018391	23019718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23018400_23019700
ES.17534.2	chr19	+	3585	1	Intergenic	novelGene_14533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAAATTTACTGAAGAA	NA	False	NA	NA	False	AAAAAG	-33	NA	23019416	23023001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23019400_23023000
ES.17534.3	chr19	+	3513	2	Antisense	novelGene_ENSMUSG00000097930.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAAATTTACTGAAGAA	NA	False	NA	NA	False	AAAAAG	-33	NA	23019416	23023001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_23020662_23020733
ES.17535.1	chr19	+	183	1	Intergenic	novelGene_14535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	23051800	23051983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23051800_23052000
ES.17536.1	chr19	+	2724	2	Intergenic	novelGene_14538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCACTCTTTCTGAGGA	1937	False	NA	NA	False	NA	NA	NA	23063516	23068214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23065392_23067365
ES.17537.1	chr19	-	1432	3	Antisense	novelGene_ENSMUSG00000118155.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	367	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATAGGACAAAGAAGCTT	4791	False	NA	NA	False	NA	NA	NA	23071125	22945674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22946319_22946823_22947359_23070872
ES.17537.10	chr19	-	1757	1	Intergenic	novelGene_14531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAACTGTTGGCAGAG	NA	False	NA	NA	False	AATAAA	-26	NA	23012622	23010865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23010900_23012600
ES.17537.11	chr19	-	2149	7	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.09901951359278	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTGTTGGATTCCGG	4878	False	NA	NA	False	ATTAAA	-18	NA	23053300	23014753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23015996_23028918_23029070_23039177_23039444_23040703_23040803_23040913_23041034_23041720_23041812_23053120
ES.17537.12	chr19	-	1597	4	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.18544972870135	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTGTTGGATTCCGG	4918	False	NA	NA	False	ATTAAA	-18	NA	23053260	23014753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23015988_23040699_23040803_23040913_23041034_23053120
ES.17537.13	chr19	-	1700	4	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTCTGTTGGATTCCG	4896	False	NA	NA	False	ATTAAA	-17	NA	23053282	23014754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23015996_23028918_23029070_23052643_23052790_23053120
ES.17537.14	chr19	-	1948	6	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.38887743412299	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACAGTTCTGTTGGATTC	4921	False	NA	NA	False	ATTAAA	-15	NA	23053257	23014756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23015996_23039177_23039444_23040703_23040803_23040913_23041034_23041720_23041808_23053120
ES.17537.15	chr19	-	725	1	Intergenic	novelGene_14534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTAAGTGTGTGGGTGT	NA	False	NA	NA	False	AAGAAA	-34	NA	23030933	23030208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23030200_23030900
ES.17537.16	chr19	-	2548	6	NNC	ENSMUSG00000097930.3	novel	816	2	NA	NA	9	-22473	intron_retention	FALSE	non_canonical	0	0	junction_1	5.38887743412299	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGCCTTTTCCTTG	4899	False	NA	NA	False	AATAAA	-38	NA	23053279	23037226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23037461_23037594_23039444_23040703_23040803_23040913_23041034_23041720_23041808_23053120
ES.17537.17	chr19	-	1518	4	NIC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	28	-23531	intron_retention	FALSE	canonical	0	0	junction_3	5.18544972870135	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGCATATTCTTGTTCA	4918	False	NA	NA	False	NA	NA	NA	23053260	23038284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23039444_23040703_23040803_23040913_23041034_23053120
ES.17537.18	chr19	-	173	1	Intergenic	novelGene_14536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4408	False	NA	NA	False	NA	NA	NA	23053770	23053597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23053600_23053800
ES.17537.19	chr19	-	152	1	Intergenic	novelGene_14537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAATAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	23061268	23061116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23061100_23061300
ES.17537.2	chr19	-	10644	7	NNC	ENSMUSG00000097930.3	novel	816	2	NA	NA	-33	9914	intron_retention	FALSE	canonical	0	0	junction_2	4.05859855396197	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACAATAGGACAAAGA	4928	False	NA	NA	False	NA	NA	NA	23053250	22945679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_22946319_22946823_22956242_23028918_23029070_23040703_23040803_23040913_23041034_23041720_23041808_23053120
ES.17537.20	chr19	-	5371	1	Intergenic	novelGene_14539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATATT	4794	False	NA	NA	False	NA	NA	NA	23071122	23065751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23065800_23071100
ES.17537.21	chr19	-	3930	1	Intergenic	novelGene_14540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	4953	False	NA	NA	False	NA	NA	NA	23070963	23067033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23067000_23071000
ES.17537.3	chr19	-	2885	1	NIC	ENSMUSG00000097930.3	novel	816	2	NA	NA	94732	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	22958485	22955600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_22955600_22958500
ES.17537.4	chr19	-	956	5	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	-17755	-15023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.52769256906871	365	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAGAGAAAA	4873	False	NA	NA	False	NA	NA	NA	23071043	22970616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_22971032_23028918_23029070_23040703_23040803_23040913_23041034_23070872
ES.17537.5	chr19	-	4711	1	Antisense	novelGene_ENSMUSG00000052387.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	22975327	22970616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_22970600_22975300
ES.17537.6	chr19	-	175	1	Intergenic	novelGene_14530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAGGTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	22974427	22974252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_22974300_22974400
ES.17537.7	chr19	-	1161	6	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	-17862	12320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.85798312059645	339	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGGTTTCCAAAG	4766	False	NA	NA	False	AATAAA	-17	NA	23071150	23002433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23002874_23003630_23003701_23028918_23029070_23040703_23040806_23040913_23041034_23070872
ES.17537.8	chr19	-	1297	7	NNC	ENSMUSG00000097930.3	novel	816	2	NA	NA	20	12320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.52462398683274	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGGTTTCCAAAG	4910	False	NA	NA	False	AATAAA	-17	NA	23053268	23002433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23002874_23003630_23003701_23028918_23029070_23039177_23039444_23040703_23040806_23040913_23041034_23053120
ES.17537.9	chr19	-	860	4	NNC	ENSMUSG00000097930.3	novel	2057	7	NA	NA	-17785	12318	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.43650214343336	339	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTTTGTGGTTTCCAA	4843	False	NA	NA	False	AATAAA	-15	NA	23071073	23002435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23002874_23003630_23003701_23028918_23029070_23070872
ES.17538.1	chr19	+	3694	3	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	-44343	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23074246	23145493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23074363_23095699_23095831_23142046
ES.17538.10	chr19	+	3805	3	Fusion	ENSMUSG00000033863.3_ENSMUSG00000044387.6	novel	414	2	NA	NA	1	-35	multi-exon	FALSE	canonical	1	3	junction_2	27.5	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAATAAATGAT	NA	False	NA	NA	False	NA	NA	NA	23112264	23145463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_23112319_23112722_23113057_23142046
ES.17538.11	chr19	+	450	2	NNC	ENSMUSG00000044387.6	novel	414	2	NA	NA	39	-11	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	23112302	23113070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23112405_23112722
ES.17538.12	chr19	+	1322	2	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	-6250	468	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTTGTTTGAATTCCC	NA	False	NA	NA	False	TTTAAA	-34	NA	23112339	23143303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23112405_23142046
ES.17538.13	chr19	+	4941	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-455	0	-455	0	multi-exon	FALSE	canonical	3	482	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATTACGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-29	NA	23118134	23145498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.14	chr19	+	3686	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-394	1194	-394	-1194	multi-exon	FALSE	canonical	3	482	junction_1	0	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTTGAAACGCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	23118195	23144304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.16	chr19	+	2616	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-322	2192	-322	471	multi-exon	FALSE	canonical	3	482	junction_1	0	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTGAATTCCCCCA	NA	False	NA	NA	False	TTTAAA	-37	NA	23118267	23143306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.17	chr19	+	2133	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-308	2661	-308	2	multi-exon	FALSE	canonical	3	482	junction_1	0	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCATAGCACAGC	NA	False	NA	NA	False	NA	NA	NA	23118281	23142837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.18	chr19	+	4224	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-294	556	-294	-556	multi-exon	FALSE	canonical	3	482	junction_1	0	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGATAGTAATTTTTGT	NA	False	NA	NA	False	ATTAAA	-33	NA	23118295	23144942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.19	chr19	+	2413	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-294	2367	-294	296	multi-exon	FALSE	canonical	3	482	junction_1	0	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTCTGTTTGGCACCACG	NA	False	NA	20	True	AATACA	-21	NA	23118295	23143131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.2	chr19	+	2408	2	Intergenic	novelGene_14541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACACACACACACACAG	NA	False	NA	NA	False	NA	NA	NA	23084793	23088518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23086559_23087875
ES.17538.21	chr19	+	2823	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-280	1943	-280	720	multi-exon	FALSE	canonical	3	482	junction_1	0	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCCCCTGTAAGTAGTA	NA	False	NA	31	True	NA	NA	NA	23118309	23143555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.22	chr19	+	5416	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-253	-677	-253	677	multi-exon	FALSE	canonical	3	482	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACACACCCATCAAAACC	NA	False	NA	NA	False	AATAAA	-10	NA	23118336	23146175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.23	chr19	+	2169	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-241	2558	-241	105	multi-exon	FALSE	canonical	3	482	junction_1	0	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTATAGTCAATGGAT	NA	False	NA	NA	False	NA	NA	NA	23118348	23142940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.24	chr19	+	3835	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-200	851	-200	-851	multi-exon	FALSE	canonical	3	482	junction_1	0	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCACAATTAACCTCCCG	NA	False	NA	NA	False	TATAAA	-21	NA	23118389	23144647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.25	chr19	+	7596	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-21	-3089	-21	3089	multi-exon	FALSE	canonical	3	482	junction_1	0	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTGCTTATGTGTT	NA	False	NA	NA	False	NA	NA	NA	23118568	23148587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.26	chr19	+	1549	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	-14	2951	-14	-288	multi-exon	FALSE	canonical	3	482	junction_1	0	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGTTTTTGGGGGA	NA	False	NA	NA	False	AATAAA	-15	NA	23118575	23142547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.27	chr19	+	2848	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	18	1620	18	1043	multi-exon	FALSE	canonical	3	482	junction_1	0	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATTTGAGGGGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	23118607	23143878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.28	chr19	+	4021	3	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	329	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	241	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAATAAATGAT	NA	False	NA	NA	False	NA	NA	NA	23118918	23145463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23119624_23142046_23142197_23142297
ES.17538.29	chr19	+	3504	3	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	355	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	241	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23118944	23145493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23119624_23142046_23142175_23142796
ES.17538.3	chr19	+	180	1	Intergenic	novelGene_14542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTCAT	1411	False	NA	NA	False	NA	NA	NA	23089340	23089520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23089300_23089500
ES.17538.30	chr19	+	5181	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	424	-1119	424	1119	multi-exon	FALSE	canonical	3	482	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTATGTGTGCTTT	NA	False	NA	NA	False	TATAAA	-23	NA	23119013	23146617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23119624_23142046
ES.17538.31	chr19	+	3994	3	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	510	4833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	241	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	23119099	23150331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23119624_23142046_23145490_23150304
ES.17538.32	chr19	+	3450	2	NNC	ENSMUSG00000033863.3	novel	1118	2	NA	NA	88	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAATAAATGAT	440	False	NA	NA	False	NA	NA	NA	23121095	23145463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23121129_23142046
ES.17538.33	chr19	+	177	1	Intergenic	novelGene_14545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAATAGCG	9806	False	NA	NA	False	NA	NA	NA	23130461	23130638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23130500_23130600
ES.17538.34	chr19	+	180	1	Intergenic	novelGene_14546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	629	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTTTATATGGGAA	202	False	NA	NA	False	NA	NA	NA	23135322	23135502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23135300_23135500
ES.17538.35	chr19	+	2447	1	Intergenic	novelGene_14549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	629	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	412	False	NA	NA	False	AATAAA	-19	NA	23136504	23138951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23136500_23139000
ES.17538.36	chr19	+	1860	1	Intergenic	novelGene_14550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTTCTAATATGGTGTA	2949	False	NA	NA	False	TTTAAA	-43	NA	23139820	23141680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23139800_23141700
ES.17538.37	chr19	+	4408	1	Genic_Genomic	ENSMUSG00000033863.3	novel	NA	NA	NA	NA	22203	2120	mono-exon	FALSE	NA	NA	NA	NA	NA	680	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGGTCATGGTGC	1522	False	NA	NA	False	NA	NA	NA	23143210	23147618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_23143200_23147600
ES.17538.4	chr19	+	179	1	Intergenic	novelGene_14544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGGGAAAAATAACAAGCA	2476	False	NA	10	True	NA	NA	NA	23093417	23093596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23093400_23093600
ES.17538.5	chr19	+	3530	2	NNC	ENSMUSG00000033863.3	novel	4486	2	NA	NA	-6900	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23111689	23145493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23111773_23142046
ES.17538.6	chr19	+	3548	2	Fusion	ENSMUSG00000033863.3_ENSMUSG00000044387.6	novel	414	2	NA	NA	-45	-4	multi-exon	FALSE	canonical	3	42	junction_1	0	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCAGCCATTACGTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	23112218	23145494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_23112319_23142046
ES.17538.7	chr19	+	448	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	-45	11	-45	-11	multi-exon	FALSE	canonical	3	58	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	23112218	23113070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23112319_23112722
ES.17538.8	chr19	+	3626	2	Fusion	ENSMUSG00000033863.3_ENSMUSG00000044387.6	novel	414	2	NA	NA	-38	-5	multi-exon	FALSE	canonical	3	9	junction_1	0	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCAGCCATTACGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	23112225	23145493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_23112405_23142046
ES.17538.9	chr19	+	559	2	Fusion	ENSMUSG00000033863.3_ENSMUSG00000044387.6	novel	414	2	NA	NA	-6	-291	multi-exon	FALSE	canonical	3	42	junction_1	0	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCCTTTGTTTTTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	23112257	23142544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_23112319_23142046
ES.17539.1	chr19	-	176	1	Intergenic	novelGene_14543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGATTTATTTATT	4066	False	NA	NA	False	NA	NA	NA	23089702	23089526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23089500_23089700
ES.1754.1	chr1	+	185	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGGGTTGCATGCA	793	False	NA	NA	False	NA	NA	NA	163359177	163359362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_163359200_163359400
ES.17540.1	chr19	-	2579	1	Antisense	novelGene_ENSMUSG00000033863.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGGTTCCCGATTCCT	NA	False	NA	NA	False	NA	NA	NA	23120022	23117443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23117400_23120000
ES.17541.1	chr19	-	373	1	Intergenic	novelGene_14547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAAACTTTC	6325	False	NA	NA	False	NA	NA	NA	23136070	23135697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23135700_23136100
ES.17541.2	chr19	-	231	1	Intergenic	novelGene_14548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCAATCTCCAACATC	6327	False	NA	NA	False	NA	NA	NA	23136068	23135837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23135800_23136100
ES.17542.1	chr19	-	173	1	Intergenic	novelGene_14551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATAATAAGTTT	NA	False	NA	NA	False	NA	NA	NA	23156569	23156396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23156400_23156600
ES.17543.1	chr19	+	179	1	Intergenic	novelGene_14552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTCTTAATACACTC	NA	False	NA	NA	False	NA	NA	NA	23175465	23175644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23175500_23175600
ES.17544.1	chr19	+	155	1	Intergenic	novelGene_14553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23205917	23206072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23205900_23206100
ES.17545.1	chr19	+	563	4	Antisense	novelGene_ENSMUSG00000024943.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTACGTTAATATTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	23241592	23242939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_23241706_23242126_23242334_23242463_23242543_23242775
ES.17546.1	chr19	-	4591	7	ISM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	57353	-165	-663	165	3prime_fragment	FALSE	canonical	3	141	junction_6	124.614628176453	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAGTGGAATTAGAAT	NA	False	NA	NA	False	GATAAA	-18	NA	23193829	23183649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518
ES.17546.103	chr19	-	3367	24	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	103.624668074973	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGAGAAAGATTGGTT	NA	False	NA	-10	True	AATAAA	-15	NA	23251219	23186100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237139_23238708_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.104	chr19	-	3705	3	ISM	ENSMUSG00000024943.10	ENSMUST00000226111.2	3265	24	40952	16071	-15845	-10071	internal_fragment	FALSE	canonical	3	356	junction_1	36	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGAATGCACTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	23209011	23202169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_23205661_23206278_23206403_23208921
ES.17546.105	chr19	-	2565	17	ISM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-27	19389	-27	-13377	5prime_fragment	FALSE	canonical	2	224	junction_6	54.8779540776622	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCGCAGGCTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	23251288	23205475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.106	chr19	-	4400	15	ISM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	0	20664	0	-14652	5prime_fragment	FALSE	canonical	2	224	junction_4	56.5855411689926	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTATTCTATGTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	23251261	23206750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.107	chr19	-	2451	16	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-12	-15603	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	103.870346533016	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	23251273	23207701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23207912_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.109	chr19	-	160	1	Intergenic	novelGene_14554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	23211078	23210918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23210900_23211100
ES.17546.11	chr19	-	5038	21	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	2411	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.270032488327	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	7828	False	NA	-13	True	AATAAA	-21	NA	23238819	23183816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221305_23221350_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696
ES.17546.13	chr19	-	4348	25	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.592288366566	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTATTTAAGATGAGAG	NA	False	NA	-13	True	AATAAA	-21	NA	23251277	23183816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23183848_23185233_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.19	chr19	-	7497	16	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	21076	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	128.933298862457	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTTATTTAAGATGAGA	NA	False	NA	-14	True	AATAAA	-20	NA	23220154	23183817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23194679_23194757_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999
ES.17546.2	chr19	-	5827	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-32	78	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTTCGAGTTTT	NA	False	NA	67	True	TTTAAA	-44	NA	23251293	23183736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.22	chr19	-	5733	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.988284664984	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	-15	True	AATAAA	-19	NA	23251212	23183818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192588_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.26	chr19	-	5772	26	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.692771869281	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	-15	True	AATAAA	-19	NA	23251190	23183818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195820_23195895_23199863_23199998_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.27	chr19	-	5878	25	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	123.350048135378	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	NA	False	NA	-15	True	AATAAA	-19	NA	23251289	23183818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23199863_23199998_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.31	chr19	-	5060	22	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	135	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	107.745500929373	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGTTATTTAAGATGAG	5552	False	NA	-15	True	AATAAA	-19	NA	23241095	23183818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221295_23221456_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967
ES.17546.33	chr19	-	5819	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.988284664984	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGGTTATTTAAGATGA	NA	False	NA	-16	True	AATAAA	-18	NA	23251288	23183819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192599_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.38	chr19	-	5358	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	-19	-1891	-19	-381	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGGGTTGTTTTGGTTTT	NA	False	NA	85	True	AAAAAG	-9	NA	23251280	23184195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.39	chr19	-	8486	24	NIC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	19	-465	intron_retention	FALSE	canonical	2	141	junction_6	81.4573078714923	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACTAAATTTTT	NA	False	NA	1	True	AATAAA	-28	NA	23251242	23184279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.40	chr19	-	5281	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-30	-465	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.279971954244	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACTAAATTTTT	NA	False	NA	1	True	AATAAA	-28	NA	23251212	23184279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192511_23192590_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.43	chr19	-	5346	25	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-24	-467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	139.743788373183	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAATAACTAAATTT	NA	False	NA	-1	True	AATAAA	-26	NA	23251285	23184281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192511_23192599_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243065_23246090_23246233_23250997
ES.17546.44	chr19	-	5275	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-59	467	20	-467	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAATAACTAAATTT	NA	False	NA	-1	True	AATAAA	-26	NA	23251241	23184281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.48	chr19	-	5053	23	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-12	-477	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	103.635057806765	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTTAAAAATATTTTTAAT	NA	False	NA	-11	True	AATAAA	-16	NA	23251194	23184291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.5	chr19	-	5785	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-90	-12	-11	12	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTATTTTAATACTTT	NA	False	NA	1	True	AATAAA	-35	NA	23251272	23183802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.56	chr19	-	5730	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	-479	intron_retention	FALSE	canonical	2	93	junction_6	91.8230195469228	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGGTTAAAAATATTTTTA	NA	False	NA	-13	True	AATAAA	-14	NA	23251234	23184293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.58	chr19	-	5285	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	-479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	108.137828397631	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGGTTAAAAATATTTTTA	NA	False	NA	-13	True	AATAAA	-14	NA	23251234	23184293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192590_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.6	chr19	-	8925	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-27	10	intron_retention	FALSE	canonical	2	141	junction_6	79.699767440418	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGAGTATTTTAATACT	NA	False	NA	-1	True	AATAAA	-33	NA	23251209	23183804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.60	chr19	-	5238	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-8	-480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.279971954244	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTTAAAAATATTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	23251190	23184294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192511_23192584_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.61	chr19	-	5192	24	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-37	-480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	100.087050957535	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTTAAAAATATTTTT	NA	False	NA	-14	True	AATAAA	-13	NA	23251219	23184294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220148_23221214_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.62	chr19	-	5142	24	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-1	-499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	99.9805274046573	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATATTTAAAACCT	NA	False	NA	-33	True	TTTAAA	-45	NA	23251183	23184313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216249_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.64	chr19	-	5162	25	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-24	-579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.557423915943	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCATTTTCTGCAA	NA	False	NA	-113	True	ATTAAA	-16	NA	23251206	23184393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192511_23192590_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216250_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.65	chr19	-	5139	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-39	-582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	119.74816601472	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATAATGTCATTTTCTG	NA	False	NA	-116	True	ATTAAA	-13	NA	23251221	23184396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232044_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.68	chr19	-	4381	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-2	885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	116.271525784834	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATTGATTGAAAAAAG	NA	False	NA	NA	False	TATAAA	-11	NA	23251263	23185201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216244_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.69	chr19	-	4274	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-4	825	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCGAGTTTTTACAATT	NA	False	NA	NA	False	AGTAAA	-18	NA	23251265	23185261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.72	chr19	-	3814	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	20	-386	20	386	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTCTTCCAGTAT	NA	False	NA	NA	False	NA	NA	NA	23251241	23185700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.74	chr19	-	3465	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTTATTTTTGGAAAC	NA	False	NA	2	True	AATAAA	-27	NA	23251283	23186088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.75	chr19	-	3493	25	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	93	junction_7	96.5628753139056	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTTATTTTTGGAAAC	NA	False	NA	2	True	AATAAA	-27	NA	23251263	23186088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.78	chr19	-	2955	6	ISM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	56958	2280	-1058	4	intron_retention	FALSE	canonical	3	204	junction_5	94.1156735087201	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTGGTTATTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	23194224	23186094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008
ES.17546.82	chr19	-	3268	23	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	34	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	103.599594753348	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTGGTTATTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	23251227	23186094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.84	chr19	-	3364	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	4	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	118.307136090371	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGATTGGTTATTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	23251257	23186094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.88	chr19	-	3378	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.988284664984	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251212	23186097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195820_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.89	chr19	-	6799	25	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	19	1	intron_retention	FALSE	canonical	0	0	junction_8	127.386325960311	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251242	23186097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23195895_23199863_23199998_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.9	chr19	-	5643	23	NIC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	-35	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	101.737589857843	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTAAGATGAGAGTATT	NA	False	NA	-9	True	AATAAA	-25	NA	23251296	23183812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.90	chr19	-	3260	23	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	127.794644153737	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251234	23186097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23238696_23238832_23240967_23241125_23243029_23243083_23246090_23246233_23250997
ES.17546.94	chr19	-	3402	24	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	102.779040620772	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251233	23186097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238825_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.96	chr19	-	3486	25	NNC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	128.848506006085	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	False	NA	-7	True	AATAAA	-18	NA	23251240	23186097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192590_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235009_23237006_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17546.99	chr19	-	3395	24	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	101.317819593138	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAGAAAGATTGGTTA	NA	False	NA	-9	True	AATAAA	-16	NA	23251238	23186099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208935_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ES.17547.1	chr19	+	223	1	FSM	ENSMUSG00000044424.5	ENSMUST00000104916.4	571	1	381	-33	381	33	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	23597493	23597716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23597500_23597700
ES.17548.1	chr19	+	932	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-27	-272	-27	272	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGATCAGAATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	23653184	23654116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23653200_23654100
ES.17549.1	chr19	+	9888	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-55	2741	-55	-2741	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTATGTGTGTTTCATCTC	NA	False	NA	19	True	AGTAAA	-22	NA	23664737	23706291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ES.17549.2	chr19	+	3827	5	ISM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	-7	19554	-7	-8084	5prime_fragment	FALSE	canonical	3	15	junction_4	2.27760839478607	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACAGATTATTTTTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	23664785	23689478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117
ES.17549.3	chr19	+	12571	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	4	-1	4	1	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGATTTATTCATTTT	NA	False	NA	20	True	AATAAA	-27	NA	23664796	23709033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ES.17549.4	chr19	+	2170	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	13	10391	13	265	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCAAGGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	23664805	23698641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ES.17549.5	chr19	+	1848	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	17	10709	17	0	multi-exon	FALSE	canonical	3	15	junction_4	3.54338193757822	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTATTTTTTAAATGAT	NA	False	NA	NA	False	AATAAA	-13	NA	23664809	23698323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ES.17549.6	chr19	+	1433	8	NIC	ENSMUSG00000074925.5	novel	12574	7	NA	NA	17	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	7.20544012166771	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAATCTATTTTTTAAA	NA	False	NA	NA	False	AATAAA	-9	NA	23664809	23698319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421_23697719_23698129
ES.17549.7	chr19	+	8372	8	NNC	ENSMUSG00000074925.5	novel	12574	7	NA	NA	17	-2890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.51868420968044	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGAACCATTTCTTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	23664809	23706142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421_23697719_23699013
ES.17549.8	chr19	+	2991	4	ISM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	18339	9168	-17511	1488	3prime_fragment	FALSE	canonical	3	15	junction_1	4.54606056566195	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTACATGATGTGTAGGT	7280	False	NA	NA	False	ATTAAA	-36	NA	23683131	23699864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_23683176_23686117_23686332_23695176_23695467_23697421
ES.17549.9	chr19	+	9529	3	ISM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	21349	2562	-14501	-2562	3prime_fragment	FALSE	canonical	3	19	junction_1	3.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTGTTTTTAAAATAT	NA	False	NA	NA	False	ATTAAA	-21	NA	23686141	23706470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_23686332_23695176_23695467_23697421
ES.1755.1	chr1	-	2027	4	FSM	ENSMUSG00000040113.15	ENSMUST00000159679.8	1790	4	-60	-177	-60	177	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAATGAAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	163552861	163529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163530858_163531571_163531822_163544651_163544828_163552470
ES.1755.2	chr1	-	1864	5	NNC	ENSMUSG00000040113.15	novel	1016	5	NA	NA	99	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTGGCTTTCAACAGT	NA	False	NA	NA	False	AGTAAA	-22	NA	163552702	163529825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163530858_163531571_163531733_163544651_163544828_163546937_163547201_163552470
ES.1755.3	chr1	-	2224	5	NNC	ENSMUSG00000040113.15	novel	1790	4	NA	NA	-172	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTGGCTTTCAACAGT	NA	False	NA	NA	False	AGTAAA	-22	NA	163552973	163529825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163530858_163531571_163531822_163544651_163544828_163546937_163547201_163552470
ES.17550.1	chr19	+	4192	12	NNC	ENSMUSG00000024897.10	novel	6620	13	NA	NA	-7	-159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.385694607919935	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTGGTCCAAAGAGC	6037	False	NA	NA	False	NA	NA	NA	23736243	23924581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_23736433_23870098_23871385_23889818_23889915_23893314_23893355_23894916_23895063_23911063_23911151_23912138_23912325_23913781_23913962_23914784_23914998_23921374_23921495_23922249_23922391_23923073
ES.17551.1	chr19	-	177	1	Intergenic	novelGene_14555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	23770789	23770612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_23770600_23770800
ES.17552.1	chr19	-	3309	2	Antisense	novelGene_ENSMUSG00000024897.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAACAAATTGCA	NA	False	NA	NA	False	NA	NA	NA	23849763	23824771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23825462_23847144
ES.17553.1	chr19	-	1091	7	NNC	ENSMUSG00000118340.2	novel	1701	4	NA	NA	-15136	22540	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	5.31245915016974	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTCCCTACAGTCATA	NA	False	NA	NA	False	AATAAA	-37	NA	23934094	23884648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23885008_23885116_23885214_23894351_23894383_23913755_23914033_23914668_23914894_23932923_23932974_23934042
ES.17553.2	chr19	-	5039	2	Antisense	novelGene_ENSMUSG00000024897.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTGTCCCTACAGTC	NA	False	NA	NA	False	AATAAA	-34	NA	23889799	23884651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23885008_23885116
ES.17553.3	chr19	-	1023	5	NNC	ENSMUSG00000118340.2	novel	1701	4	NA	NA	-14054	22519	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.78791845139511	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATGTCCCCTACATAT	NA	False	NA	NA	False	AATAAA	-16	NA	23933012	23884669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23885008_23885116_23885214_23913755_23914030_23914668_23914894_23932923
ES.17553.4	chr19	-	2429	1	Antisense	novelGene_ENSMUSG00000024897.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTACTCAATGTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	23895458	23893029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23893000_23895500
ES.17553.5	chr19	-	1812	5	NNC	ENSMUSG00000118340.2	novel	1701	4	NA	NA	-15129	9808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.95803989154981	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTGGCCATTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	23934087	23897380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23898596_23913755_23914033_23914668_23914894_23932923_23932974_23934042
ES.17553.6	chr19	-	1916	3	NNC	ENSMUSG00000118340.2	novel	1701	4	NA	NA	-14057	-5242	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	1	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATGAGCCAGACTGAT	NA	False	NA	NA	False	NA	NA	NA	23933015	23912430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23914030_23914668_23914894_23932923
ES.17553.7	chr19	-	2647	2	NNC	ENSMUSG00000118340.2	novel	1701	4	NA	NA	-15176	-11182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGTGTCTTCGTTTA	NA	False	NA	NA	False	NA	NA	NA	23934134	23918370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23920926_23934042
ES.17553.8	chr19	-	3043	1	Antisense	novelGene_ENSMUSG00000024897.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAACCAAACAAACTG	NA	False	NA	NA	False	AAGAAA	-26	NA	23926407	23923364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23923400_23926400
ES.17553.9	chr19	-	6041	2	Antisense	novelGene_ENSMUSG00000024897.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGCGCTAATGTTACA	NA	False	NA	NA	False	AATACA	-26	NA	23932748	23926632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_23929619_23929693
ES.17554.1	chr19	+	3875	2	Intergenic	novelGene_14556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAGACATCCTAATTT	NA	False	NA	NA	False	NA	NA	NA	23938830	23942744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23941692_23941730
ES.17555.1	chr19	+	6237	1	Intergenic	novelGene_14557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCACTGGTTTCTCTAA	NA	False	NA	NA	False	NA	NA	NA	23988673	23994910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_23988700_23994900
ES.17556.1	chr19	-	3055	11	FSM	ENSMUSG00000071604.6	ENSMUST00000096164.6	2548	11	-509	2	-509	-2	multi-exon	FALSE	canonical	3	34	junction_3	7.73627817493658	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCATGTGTAGTGTTTG	NA	False	NA	-6	True	AATAAA	-22	NA	24008892	23950115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
ES.17556.2	chr19	-	4461	10	NIC	ENSMUSG00000071604.6	novel	2548	11	NA	NA	10	-7	intron_retention	FALSE	canonical	3	34	junction_3	6.6332495807108	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGACTCCATGTGTAGT	NA	False	NA	-11	True	AATAAA	-17	NA	24008373	23950120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23965940_23972144_23972256_23998969_23999027_24007911
ES.17556.3	chr19	-	2585	11	NNC	ENSMUSG00000071604.6	novel	2548	11	NA	NA	30	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9590683706388	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGGACTCCATGTGT	NA	False	NA	-14	True	AATAAA	-14	NA	24008353	23950123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23950996_23952647_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
ES.17556.4	chr19	-	2386	11	NNC	ENSMUSG00000071604.6	novel	2548	11	NA	NA	8547	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	16.5435788147547	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCTGGACTCCATGTG	7508	False	NA	-15	True	AATAAA	-13	NA	23999836	23950124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_23999515
ES.17557.1	chr19	+	4141	1	Intergenic	novelGene_14558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCCCATGTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	24080108	24084249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24080100_24084200
ES.17557.2	chr19	+	2916	1	Intergenic	novelGene_14559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACGTAATTAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	24080109	24083025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24080100_24083000
ES.17557.3	chr19	+	3311	1	Intergenic	novelGene_14560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCTTGGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	24080109	24083420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24080100_24083400
ES.17558.1	chr19	+	174	1	Intergenic	novelGene_14561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	24089235	24089409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24089200_24089400
ES.17559.1	chr19	+	6106	1	Antisense	novelGene_ENSMUSG00000024812.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCACTCTTCCCTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	24114707	24120813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_24114700_24120800
ES.1756.1	chr1	+	870	1	FSM	ENSMUSG00000089700.2	ENSMUST00000161177.2	1042	1	533	-361	533	361	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTCTAGGTACTCTCAAG	NA	False	NA	NA	False	AATAAA	-42	NA	163557670	163558540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163557700_163558500
ES.17560.1	chr19	+	177	1	Intergenic	novelGene_14563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24148728	24148905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24148700_24148900
ES.17561.1	chr19	+	2524	1	Intergenic	novelGene_14565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGG	NA	False	NA	NA	False	NA	NA	NA	24191368	24193892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24191400_24193900
ES.17562.1	chr19	-	4586	26	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	78	28902	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	125.98918048785	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGCTCAAGGAAAATTATA	NA	False	NA	NA	False	AATAAA	-40	NA	24202312	24042966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24042977_24071867_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078111_24078187_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.10	chr19	-	4629	24	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	106	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	82.6461699898347	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202284	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171202_24202226
ES.17562.12	chr19	-	4507	22	NIC	ENSMUSG00000024812.12	novel	4591	23	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	112.853727093175	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202390	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
ES.17562.14	chr19	-	4663	23	FSM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	14	-9	14	9	multi-exon	FALSE	canonical	1	2	junction_22	83.9099280958925	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24151539	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24151318
ES.17562.15	chr19	-	4894	25	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	18	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	128.058336315915	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202372	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24152497_24152671_24171072_24171194_24202214
ES.17562.16	chr19	-	5880	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-18	9	intron_retention	FALSE	canonical	0	0	junction_22	84.5010147134536	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202412	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.19	chr19	-	4690	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-58	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	110.720443139131	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202452	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.2	chr19	-	4740	25	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	1	28902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.389696876082	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGCTCAAGGAAAATTATA	NA	False	NA	NA	False	AATAAA	-40	NA	24202389	24042966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24042977_24071867_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.21	chr19	-	3427	15	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	34	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	139.831841429451	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202356	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24103121_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.22	chr19	-	4717	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-13	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	110.603670927706	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202407	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099697_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.23	chr19	-	4764	24	FSM	ENSMUSG00000024812.12	ENSMUST00000233658.3	4920	24	165	-9	165	9	multi-exon	FALSE	canonical	0	0	junction_23	82.6461699898347	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24177849	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24177648
ES.17562.25	chr19	-	5971	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-18	9	intron_retention	FALSE	canonical	0	0	junction_22	84.46932055902	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202412	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.28	chr19	-	4108	21	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-19	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.955109848596	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202413	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24079275_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.29	chr19	-	4342	18	NIC	ENSMUSG00000024812.12	novel	4668	23	NA	NA	12168	9	intron_retention	FALSE	canonical	3	322	junction_15	33.4944089741251	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24108278	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218
ES.17562.3	chr19	-	4746	25	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	0	28902	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	108.389696876082	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGCTCAAGGAAAATTATA	NA	False	NA	NA	False	AATAAA	-40	NA	24202390	24042966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24042985_24071874_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202210
ES.17562.30	chr19	-	4580	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	113	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	110.446387613457	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202277	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088835_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.31	chr19	-	4738	24	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	82.6461699898347	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGTGTATGAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	24202402	24071864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171196_24202224
ES.17562.32	chr19	-	4827	24	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	-99	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	110.653907904753	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTGTGTATGAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	24202493	24071866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090314_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202215
ES.17562.34	chr19	-	4533	23	NNC	ENSMUSG00000024812.12	novel	4591	23	NA	NA	70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.609405020955	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAAAAATGTGTGTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	24202320	24071869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088982_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116190_24202210
ES.17562.35	chr19	-	4934	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.496456588954	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACATAAAAATGTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	24202426	24071874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075854_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.37	chr19	-	2340	10	NIC	ENSMUSG00000024812.12	novel	4668	23	NA	NA	30271	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	127.104506432917	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACATAAAAATGTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	24090175	24071874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109
ES.17562.39	chr19	-	4634	25	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.389696876082	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGACATAAAAATGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	24202389	24071875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078109_24078196_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.4	chr19	-	4894	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-151	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202545	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.42	chr19	-	5110	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-514	-120	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGAGTCTCTACACAC	NA	False	NA	0	True	AATAAA	-22	NA	24202908	24072006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.43	chr19	-	4451	23	FSM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	78	139	78	-121	multi-exon	FALSE	canonical	1	2	junction_22	83.9099280958925	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCTGAGTCTCTACACA	NA	False	NA	-1	True	AATAAA	-21	NA	24151475	24072007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24151318
ES.17562.44	chr19	-	4564	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-18	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	110.446387613457	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGCTGAGTCTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	24202412	24072010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088835_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.45	chr19	-	4475	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	1	-125	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	110.720443139131	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAGTGCTGAGTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	24202389	24072011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.49	chr19	-	4487	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	-23	127	-19	-127	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202413	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
ES.17562.5	chr19	-	5688	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	33	9	intron_retention	FALSE	canonical	0	0	junction_22	84.2144178975203	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202357	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.50	chr19	-	4644	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-68	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.496456588954	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202462	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075675_24076824_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.51	chr19	-	4296	22	NIC	ENSMUSG00000024812.12	novel	4591	23	NA	NA	57	-127	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	112.853727093175	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202333	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
ES.17562.52	chr19	-	4546	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	0	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	110.603670927706	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202390	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099697_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.53	chr19	-	4490	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	83	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	110.547494689978	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202307	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112225_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.54	chr19	-	4393	25	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	115	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.389696876082	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTAGTGCTGAGTCTC	NA	False	NA	-7	True	AATAAA	-15	NA	24202275	24072013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078111_24078187_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.57	chr19	-	4529	24	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	44	-132	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	110.653907904753	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGAGTTTAGTGCTGA	NA	False	NA	-12	True	AATAAA	-10	NA	24202346	24072018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091445_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171191_24202212
ES.17562.58	chr19	-	4529	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	44	-132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.265807048961	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGAGTTTAGTGCTGA	NA	False	NA	-12	True	AATAAA	-10	NA	24202346	24072018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078272_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.59	chr19	-	4490	24	NNC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	78	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	110.265807048961	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAATGAGTTTAGTGCT	NA	False	NA	-14	True	AATAAA	-8	NA	24202312	24072020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079270_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.60	chr19	-	4236	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-16	-496	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCACGTTTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	24202410	24072382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.61	chr19	-	7285	1	NIC	ENSMUSG00000024812.12	novel	4668	23	NA	NA	40721	-554	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTCAGACTAAGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	24079725	24072440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072400_24079700
ES.17562.62	chr19	-	4039	23	NNC	ENSMUSG00000024812.12	novel	4920	24	NA	NA	1	-560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	110.720443139131	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCCGTCTCAGACTAAG	NA	False	NA	NA	False	NA	NA	NA	24202389	24072446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202215
ES.17562.65	chr19	-	4083	24	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	-18	-651	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	82.6461699898347	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTATCTTTCCTCACTC	NA	False	NA	NA	False	NA	NA	NA	24202412	24072537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.66	chr19	-	176	1	Intergenic	novelGene_14562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAATAAGAA	NA	False	NA	NA	False	NA	NA	NA	24094943	24094767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24094800_24094900
ES.17562.67	chr19	-	643	5	ISM	ENSMUSG00000024812.12	ENSMUST00000232956.2	4728	24	39	38002	35	21	5prime_fragment	FALSE	canonical	0	0	junction_4	166.67408316832	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTATTTTTTTATCA	NA	False	NA	NA	False	AATAAA	-19	NA	24202355	24109870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ES.17562.68	chr19	-	175	1	Intergenic	novelGene_14564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCTGAAGAG	NA	False	NA	NA	False	NA	NA	NA	24163293	24163118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24163100_24163300
ES.17562.7	chr19	-	3848	19	NNC	ENSMUSG00000024812.12	novel	4668	23	NA	NA	11915	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.6458143338394	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24108531	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087169_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218
ES.17562.9	chr19	-	4690	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	-72	-27	-68	9	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATGAATGTTTTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	24202462	24071859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
ES.17563.1	chr19	+	177	1	Intergenic	novelGene_14566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTATTTATGTT	7000	False	NA	NA	False	NA	NA	NA	24204565	24204742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24204600_24204700
ES.17564.1	chr19	-	173	1	Intergenic	novelGene_14567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	24230997	24230824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24230800_24231000
ES.17565.1	chr19	-	3807	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	19	-2712	-18	2712	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTCTCACATTGCACC	NA	False	NA	NA	False	ATTAAA	-16	NA	24257950	24236104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.10	chr19	-	1917	1	NIC	ENSMUSG00000059363.11	novel	1114	5	NA	NA	15	-16812	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24257954	24256037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24256000_24258000
ES.17565.2	chr19	-	2985	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	36	-1907	-1	1907	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTTTGGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	24257933	24236909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.3	chr19	-	2664	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	7	-1557	7	1557	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTGTCCCTTTGTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	24257962	24237259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.5	chr19	-	1298	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	36	-220	-1	220	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCGTGCTTTGTCACCT	NA	False	NA	NA	False	AAGAAA	-15	NA	24257933	24238596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.6	chr19	-	1037	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	11	66	11	-18	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	24257958	24238882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.7	chr19	-	805	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	11	298	11	111	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGACCTGGCTCTTCA	NA	False	NA	-2	True	AAAAAG	-20	NA	24257958	24239114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17565.8	chr19	-	704	5	FSM	ENSMUSG00000059363.11	ENSMUST00000123684.2	1072	5	112	256	112	105	multi-exon	FALSE	canonical	2	9	junction_2	173.887894920837	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCCCCGGACCTGGC	NA	False	NA	-8	True	AAAAAG	-14	NA	24257820	24239120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249667_24249832_24254544_24254640_24257770
ES.17565.9	chr19	-	697	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	15	402	15	7	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCTCCTGTAGCTGAA	NA	False	NA	-7	True	ATTAAA	-22	NA	24257954	24239218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ES.17566.1	chr19	-	2620	1	Intergenic	novelGene_14568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTATGAGGAGAACCAAT	NA	False	NA	NA	False	GGGGCT	-24	NA	24261537	24258917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24258900_24261500
ES.17567.1	chr19	-	2771	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	11	-209	11	209	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCCCCGTGTGGTGGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	24533225	24271948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.10	chr19	-	158	1	Intergenic	novelGene_14569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	3204	False	NA	NA	False	NA	NA	NA	24277379	24277221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24277200_24277400
ES.17567.11	chr19	-	4736	8	ISM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	177047	5372	-61483	-4769	internal_fragment	FALSE	canonical	3	31	junction_6	4.86973158544552	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACTGTAATTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	24356189	24277529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165
ES.17567.12	chr19	-	2901	15	NNC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-75	-7737	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7657145822214	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTCTCTCCTTTCTTT	NA	False	NA	NA	False	GATAAA	-23	NA	24533311	24280497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24281511_24282020_24282137_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.13	chr19	-	172	1	Intergenic	novelGene_14570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4623	False	NA	NA	False	NA	NA	NA	24286286	24286114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24286100_24286300
ES.17567.14	chr19	-	2013	1	Intergenic	novelGene_14571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24302877	24300864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24300900_24302900
ES.17567.15	chr19	-	4264	4	Genic_Genomic	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-36496	47111	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGTTGATAATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	24331202	24326413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_24326529_24326725_24327006_24327141_24327889_24328080
ES.17567.16	chr19	-	3547	7	ISM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-391	81818	-391	19549	5prime_fragment	FALSE	canonical	3	28	junction_1	6.34209919681348	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAACTTGTTCAGA	NA	False	NA	NA	False	AAGAAA	-4	NA	24533627	24353975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.17	chr19	-	975	1	NIC	ENSMUSG00000024867.15	novel	2387	14	NA	NA	-79771	22	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAAGTTATTCATACAT	NA	False	NA	NA	False	NA	NA	NA	24374477	24373502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24373500_24374500
ES.17567.18	chr19	-	3320	1	Intergenic	novelGene_14572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	24392523	24389203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24389200_24392500
ES.17567.19	chr19	-	2697	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-97	-1745	-97	1745	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGCATCAGGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	24454817	24452120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24452100_24454800
ES.17567.2	chr19	-	2939	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	-366	0	-366	0	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	0	True	AATAAA	-16	NA	24533602	24272157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.20	chr19	-	1613	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-97	-661	-97	661	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTCTAACACTTTTC	NA	False	NA	NA	False	AGTAAA	-9	NA	24454817	24453204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24453200_24454800
ES.17567.21	chr19	-	1416	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-148	-413	-148	413	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTCATGGCACACTAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	24454868	24453452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24453500_24454900
ES.17567.22	chr19	-	1284	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	-120	-309	-120	309	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTAAATAATTGAGAG	NA	False	NA	NA	False	AATACA	-15	NA	24454840	24453556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24453600_24454800
ES.17567.23	chr19	-	3423	1	Intergenic	novelGene_14573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCAGATGGTGATGAGA	5743	False	NA	NA	False	NA	NA	NA	24502510	24499087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24499100_24502500
ES.17567.24	chr19	-	237	1	Intergenic	novelGene_14574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGATTACAGAATGAGG	7292	False	NA	NA	False	NA	NA	NA	24511449	24511212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24511200_24511400
ES.17567.25	chr19	-	308	1	Intergenic	novelGene_14575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAACACATTCCAC	1440	False	NA	NA	False	NA	NA	NA	24517301	24516993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24517000_24517300
ES.17567.26	chr19	-	177	1	Intergenic	novelGene_14576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAAGCGGGGCC	1440	False	NA	NA	False	NA	NA	NA	24517301	24517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24517100_24517300
ES.17567.3	chr19	-	6370	5	NNC	ENSMUSG00000024867.15	novel	2387	14	NA	NA	15335	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	1212	False	NA	0	True	AATAAA	-16	NA	24279371	24272157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24273550_24273938_24274006_24274215_24274279_24274320_24277189_24277391
ES.17567.6	chr19	-	3251	17	NNC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-386	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	16.7891333903808	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGGTCATACATTGAT	NA	False	NA	-2	True	AATAAA	-14	NA	24533622	24272159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24272919_24281395_24281511_24282020_24282137_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24417893_24418072_24420965_24421053_24533128
ES.17567.7	chr19	-	2916	15	NNC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-385	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.2515305081358	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGGTCATACATTGAT	NA	False	NA	-2	True	AATAAA	-14	NA	24533621	24272159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337343_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.8	chr19	-	2839	14	NIC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-385	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.5783924444472	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTGGTCATACATTG	NA	False	NA	-4	True	AATAAA	-12	NA	24533621	24272161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24272919_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ES.17567.9	chr19	-	2885	14	NIC	ENSMUSG00000024867.15	novel	2573	15	NA	NA	-385	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	11.6659622216178	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTGGTCATACATTG	NA	False	NA	-4	True	AATAAA	-12	NA	24533621	24272161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24420965_24421053_24533128
ES.17568.1	chr19	+	3149	1	Intergenic	novelGene_14577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATGCCACCACTCTC	7345	False	NA	NA	False	AATAAA	-20	NA	24536548	24539697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24536500_24539700
ES.17569.1	chr19	+	589	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	-60	417	-60	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGGTACGGTCTTTAT	NA	False	NA	NA	False	AGTAAA	-14	NA	24852989	24853578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_24853000_24853600
ES.17569.2	chr19	+	404	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	2	540	2	-540	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATGACTCATGGCT	NA	False	NA	NA	False	AAAAAG	-37	NA	24853051	24853455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_24853100_24853500
ES.1757.1	chr1	+	3963	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	-19	2	-19	-2	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCAACTCTCATTTTTA	NA	False	NA	16	True	ATTAAA	-23	NA	163607132	163744676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.11	chr1	+	3900	21	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	86	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	57.7870876580573	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTGTCCAACTCTCA	NA	False	NA	10	True	ATTAAA	-17	NA	163607237	163744670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163694958_163695007_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.12	chr1	+	3502	20	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	88	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.7579443778259	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGGCTGTGTTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	163607239	163743495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163644315_163645370_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.13	chr1	+	3078	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	92	776	92	-776	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTCTGGAAGTTTC	NA	False	NA	NA	False	TTTAAA	-30	NA	163607243	163743902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.14	chr1	+	2867	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	92	987	92	-987	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTCTATTGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163607243	163743691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.15	chr1	+	4325	20	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	93	472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.7579443778259	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATAATACTCCTGATAA	NA	False	NA	NA	False	AATAAA	-18	NA	163607244	163745150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643520_163645402_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.16	chr1	+	3756	20	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	104	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	45.794555071954	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCCAACTCTCATTTT	NA	False	NA	14	True	ATTAAA	-21	NA	163607255	163744674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715860_163743360
ES.1757.18	chr1	+	3346	16	NIC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	111	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	49.5421705889706	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCAGCACTGTCCAACT	NA	False	NA	6	True	ATTAAA	-13	NA	163607262	163744666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163710951_163711142_163715774_163715875_163743293
ES.1757.19	chr1	+	3806	20	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	128	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	45.800724570591	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163607279	163744672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689529_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.2	chr1	+	3771	19	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	46.7346396499414	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTCCAACTCTCATTT	NA	False	NA	13	True	ATTAAA	-20	NA	163607151	163744673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624893_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.20	chr1	+	2693	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	136	1183	136	-1183	multi-exon	FALSE	canonical	3	16	junction_19	53.7530231707948	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGGCTGTGTTGCTTAT	NA	False	NA	NA	False	NA	NA	NA	163607287	163743495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ES.1757.21	chr1	+	3672	19	NIC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	139	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.5233579990328	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCAACTCTCATTTTT	NA	False	NA	15	True	ATTAAA	-22	NA	163607290	163744675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163607472_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.24	chr1	+	3131	12	NNC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	277	-62150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	56.7628093818974	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTGCTCATTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	163607428	163682528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163680692
ES.1757.25	chr1	+	3576	19	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	4425	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5233579990328	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCAACTCTCATTTTTA	NA	False	NA	16	True	ATTAAA	-23	NA	163611576	163744676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163611661_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.26	chr1	+	3637	20	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	4429	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6837328109836	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCAACTCTCATTTTT	NA	False	NA	15	True	ATTAAA	-22	NA	163611580	163744675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163611661_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ES.1757.27	chr1	+	2623	19	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	4433	-947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5233579990328	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCCGAAGTCATGTGT	NA	False	NA	NA	False	AAAAAG	-18	NA	163611584	163743731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163611661_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.28	chr1	+	3752	19	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	4457	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5233579990328	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	False	NA	12	True	ATTAAA	-19	NA	163611608	163744672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163611873_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.29	chr1	+	5501	12	NIC	ENSMUSG00000026585.14	novel	3946	20	NA	NA	38259	-8	intron_retention	FALSE	canonical	3	164	junction_2	14.773776186538	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCACTGTCCAACTCTCA	NA	False	NA	10	True	ATTAAA	-17	NA	163645410	163744670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.31	chr1	+	2945	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-14	-52	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGCCATTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	163757319	163781319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.32	chr1	+	4391	15	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-14	10603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	28.4400551105985	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACCATTAAAGATTAAAAA	NA	False	NA	NA	False	TTTAAA	-7	NA	163757319	163793298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950_163782686_163793279
ES.1757.33	chr1	+	3246	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	15	1107	-10	217	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTTTTATGTGCTAT	NA	False	NA	11	True	AATAAA	-20	NA	163757348	163781588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.34	chr1	+	4290	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTGTGTTCTTGTCT	NA	False	NA	NA	False	AATAAA	-28	NA	163757348	163782693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.35	chr1	+	3067	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-10	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.1980029019265	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGCCATTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	163757348	163781319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762391_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.36	chr1	+	5373	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	28.6690976447344	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGTTACAATTATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	163757349	163782679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163768590_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.37	chr1	+	3128	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-9	214	combination_of_known_splicesites	FALSE	canonical	3	3	junction_3	29.6643257503389	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757349	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.38	chr1	+	5086	12	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-8	-58	intron_retention	FALSE	canonical	0	0	junction_10	31.7297472335367	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAATTTTGTGCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	163757350	163781313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.39	chr1	+	4125	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5152580821861	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTCTTGTCTGT	NA	False	NA	NA	False	AATAAA	-30	NA	163757350	163782695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163758191_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163780105_163780186_163780950
ES.1757.4	chr1	+	3988	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	19	5	19	-5	multi-exon	FALSE	canonical	3	16	junction_19	53.7530231707948	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGTCCAACTCTCATTT	NA	False	NA	13	True	ATTAAA	-20	NA	163607170	163744673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ES.1757.40	chr1	+	4281	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	29.4268725555803	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGGTTACAATTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	163757355	163782678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779553_163780186_163780950
ES.1757.41	chr1	+	4420	14	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	25.1002722821696	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACAATTATTTCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	163757355	163782683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.42	chr1	+	4136	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	30.031811837154	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTACAATGGTTACAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	163757360	163782675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.43	chr1	+	3174	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	4	220	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTTATGTGCTATGAA	NA	False	NA	14	True	AATAAA	-23	NA	163757362	163781591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.44	chr1	+	7709	11	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	7	-1	intron_retention	FALSE	canonical	3	27	junction_2	25.6327914983913	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGTGTTCTTGTCTG	NA	False	NA	NA	False	AATAAA	-29	NA	163757365	163782694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163768788_163771392_163771471_163772364_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.45	chr1	+	4403	15	NNC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.0841630341413	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTACAATTATTTCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	163757384	163782683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768327_163768428_163768589_163768788_163771392_163771471_163772364_163772505_163773734_163773918_163776710_163776883_163778161_163778296_163779505_163780186_163780950
ES.1757.46	chr1	+	4181	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	187	0	147	0	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTCTTGTCTGT	NA	False	NA	NA	False	AATAAA	-30	NA	163757520	163782695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.47	chr1	+	6135	11	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	198	0	intron_retention	FALSE	canonical	0	0	junction_7	32.5981594572454	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGGTTACAATTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	163757571	163782678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163768788_163771392_163771471_163772364_163772505_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.48	chr1	+	2641	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	208	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.4725514010378	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGCCATTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	163757581	163781319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.49	chr1	+	3034	14	FSM	ENSMUSG00000026584.15	ENSMUST00000162234.2	4336	14	209	1093	209	214	multi-exon	FALSE	canonical	3	18	junction_6	30.7224644598249	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757582	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.50	chr1	+	2736	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	250	1382	210	-58	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAATTTTGTGCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	163757583	163781313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.52	chr1	+	2298	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	242	216	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	30.0650914221497	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTTTTATGTGCTA	NA	False	NA	10	True	AATAAA	-19	NA	163757615	163781587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163780950
ES.1757.53	chr1	+	2550	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	244	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	34.0330504173525	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTAATTTTGTGCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	163757617	163781312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.54	chr1	+	3972	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	252	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.4268725555803	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTACAATTATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	163757625	163782681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.55	chr1	+	2013	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	253	-58	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	30.0650914221497	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAATTTTGTGCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	163757626	163781313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163780950
ES.1757.56	chr1	+	4086	14	FSM	ENSMUSG00000026584.15	ENSMUST00000162234.2	4336	14	253	-3	253	2	multi-exon	FALSE	canonical	3	18	junction_6	30.7224644598249	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTACAATTATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	163757626	163782681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.57	chr1	+	2881	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	253	220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.4268725555803	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTTATGTGCTATGAA	NA	False	NA	14	True	AATAAA	-23	NA	163757626	163781591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.58	chr1	+	3665	14	NNC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	254	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.8818473626986	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTAATTTTGTGCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	163757627	163781312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163768590_163768675_163768788_163771392_163771471_163772364_163772505_163773734_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.59	chr1	+	2923	14	FSM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	269	1096	254	212	multi-exon	FALSE	canonical	2	8	junction_9	27.5489881041415	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAAAGCTCTTTTATGT	NA	False	NA	6	True	AATAAA	-15	NA	163757627	163781583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773771_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.60	chr1	+	3056	14	NIC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	254	220	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	25.1002722821696	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTTATGTGCTATGAA	NA	False	NA	14	True	AATAAA	-23	NA	163757627	163781591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.61	chr1	+	2864	14	NIC	ENSMUSG00000026584.15	novel	4288	14	NA	NA	254	214	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	32.5083512256202	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757627	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773771_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.62	chr1	+	1124	6	ISM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	270	14805	255	-4539	5prime_fragment	FALSE	canonical	3	79	junction_2	14.0939703419583	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGGCTTAAAGTTTC	NA	False	NA	NA	False	ATTAAA	-9	NA	163757628	163767874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449
ES.1757.63	chr1	+	3943	13	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	255	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.6511283434549	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTACAATTATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	163757628	163782681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773734_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.64	chr1	+	4086	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	255	214	intron_retention	FALSE	canonical	3	75	junction_7	12.5662135196813	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757628	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.65	chr1	+	2860	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	255	214	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.4725514010378	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757628	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.66	chr1	+	5276	13	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	263	0	intron_retention	FALSE	canonical	3	75	junction_8	13.4791505667086	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGGTTACAATTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	163757636	163782678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.67	chr1	+	3908	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	263	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	34.0330504173525	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTATTTCTTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	163757636	163782689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.68	chr1	+	2592	14	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	264	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.4268725555803	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAATTTTGTGCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	163757637	163781313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779595_163780186_163780950
ES.1757.69	chr1	+	3037	15	NNC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	264	214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.471747884185	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163757637	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163760328_163760414_163761049_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.70	chr1	+	5398	12	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	264	220	intron_retention	FALSE	canonical	3	75	junction_8	14.0765322551607	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTTATGTGCTATGAA	NA	False	NA	14	True	AATAAA	-23	NA	163757637	163781591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163773918_163776710_163776883_163778136_163780186_163780950
ES.1757.72	chr1	+	2712	14	NNC	ENSMUSG00000026584.15	novel	4336	14	NA	NA	269	-53	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	33.9184542463471	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGCCATTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	163757642	163781318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776766_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.73	chr1	+	3746	13	ISM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	3848	-14	3833	-2	3prime_fragment	FALSE	canonical	2	8	junction_8	27.1426274008656	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTGTGTTCTTGTCT	NA	False	NA	NA	False	AATAAA	-28	NA	163761206	163782693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773771_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.74	chr1	+	2624	12	ISM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	4864	1110	4824	214	3prime_fragment	FALSE	canonical	3	75	junction_6	10.4660016282554	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	10	True	NA	8	True	AATAAA	-17	NA	163762197	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.75	chr1	+	2261	9	ISM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	10115	1114	-1235	210	3prime_fragment	FALSE	canonical	3	75	junction_3	11.9837129054396	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACAAAAGCTCTTTTAT	5244	False	NA	4	True	AATAAA	-13	NA	163767448	163781581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.76	chr1	+	3591	9	NNC	ENSMUSG00000026584.15	novel	1825	2	NA	NA	-491	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.7239110700393	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGTGTTCTTGTCTG	5988	False	NA	NA	False	AATAAA	-29	NA	163768192	163782694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163768428_163768589_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ES.1757.77	chr1	+	3083	2	FSM	ENSMUSG00000026584.15	ENSMUST00000162920.2	1825	2	-1044	-214	-1044	214	multi-exon	FALSE	canonical	3	111	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTCTTTTATGTGC	NA	False	NA	8	True	AATAAA	-17	NA	163777737	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163780186_163780950
ES.1757.78	chr1	+	4545	3	NNC	ENSMUSG00000026584.15	novel	1825	2	NA	NA	-606	1129	intron_retention	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163778175	163783824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163781290_163781396_163781909_163782905
ES.1757.79	chr1	+	5676	1	Genic_Genomic	ENSMUSG00000026584.15	novel	NA	NA	NA	NA	-606	1156	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGGCTACATAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	163778175	163783851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_163778200_163783900
ES.1757.8	chr1	+	2716	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	48	1182	48	-1182	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGCTGTGTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	163607199	163743496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ES.1757.80	chr1	+	1580	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	-63	-98	-63	98	multi-exon	FALSE	canonical	3	75	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGTAGCCTCATGTTTT	NA	False	NA	NA	False	NA	NA	NA	163822394	163824910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163822547_163823482
ES.1757.81	chr1	+	1519	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	-8	2	-8	-2	multi-exon	FALSE	canonical	3	49	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGACTGTTCAATTT	NA	False	NA	7	True	AATAAA	-14	NA	163822449	163824810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163822641_163823482
ES.1757.82	chr1	+	2926	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	19	-1432	19	1432	multi-exon	FALSE	canonical	3	49	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCAATAATGACCCTCA	NA	False	NA	NA	False	AATAAA	-31	NA	163822476	163826244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_163822641_163823482
ES.1757.83	chr1	+	220	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGGAGCAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	163846848	163847068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_163846800_163847100
ES.1757.9	chr1	+	4368	21	NNC	ENSMUSG00000026585.14	novel	4012	21	NA	NA	65	131298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	44.642440569485	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCATTCTGATTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	163607216	163875976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293_163745143_163875953
ES.17570.1	chr19	+	215	1	Intergenic	novelGene_14578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	24913916	24914131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24913900_24914100
ES.17571.1	chr19	-	2227	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-13	-285	-4	285	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTTAATTTTCTGTA	NA	False	NA	-3	True	ATTAAA	-19	NA	24938978	24896994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.11	chr19	-	1504	14	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	1	-517	intron_retention	FALSE	canonical	3	171	junction_13	17.8885438199983	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATATATCCTCTGGAG	NA	False	NA	-38	True	AGTAAA	-26	NA	24938964	24897796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24898067_24898384_24898515_24899960_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.12	chr19	-	1456	15	NNC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.9403412566793	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACATAACATTGTAG	NA	False	NA	-87	True	NA	NA	NA	24938965	24897845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24898067_24898384_24898515_24899867_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.13	chr19	-	1303	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	6	620	6	-620	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTACCGCTGTTGTGA	NA	False	NA	NA	False	TTTAAA	-7	NA	24938959	24897899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.14	chr19	-	179	1	Intergenic	novelGene_14579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTGTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	24921209	24921030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24921000_24921200
ES.17571.15	chr19	-	1094	6	ISM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-12	27663	-3	10	5prime_fragment	FALSE	canonical	3	171	junction_5	24.2272573767647	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	TATAAA	-11	NA	24938977	24924942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.16	chr19	-	4899	1	NIC	ENSMUSG00000024878.10	novel	802	8	NA	NA	-3	-9117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGGCAAGTGAGAGTC	NA	False	NA	NA	False	NA	NA	NA	24938968	24934069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24934100_24939000
ES.17571.17	chr19	-	548	1	NIC	ENSMUSG00000024878.10	novel	802	8	NA	NA	-3	-13468	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAGATGCCGACTG	NA	False	NA	NA	False	ATTAAA	-43	NA	24938968	24938420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24938400_24939000
ES.17571.3	chr19	-	1897	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	33	-1	33	1	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGTGATGGTACTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	24938932	24897278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.4	chr19	-	1479	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	-24	474	-15	-474	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGTTCCAGAATTTTC	NA	False	NA	5	True	CATAAA	-39	NA	24938989	24897753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.5	chr19	-	4706	14	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	0	-511	intron_retention	FALSE	canonical	3	171	junction_13	17.4362745057267	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCCTCTGGAGGTTTTT	NA	False	NA	-32	True	AGTAAA	-32	NA	24938965	24897790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.6	chr19	-	1724	14	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	8	-515	intron_retention	FALSE	canonical	3	171	junction_13	17.8885438199983	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATCCTCTGGAGGT	NA	False	NA	-36	True	AGTAAA	-28	NA	24938957	24897794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17571.7	chr19	-	1480	15	NIC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	1	-515	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	49.7256247331498	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATCCTCTGGAGGT	NA	False	NA	-36	True	AGTAAA	-28	NA	24938964	24897794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938680
ES.17571.9	chr19	-	1457	16	NNC	ENSMUSG00000024878.10	novel	1929	15	NA	NA	40	-515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.1904323398279	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATCCTCTGGAGGT	NA	False	NA	-36	True	AGTAAA	-28	NA	24938925	24897794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24907098_24907182_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ES.17572.1	chr19	+	177	1	Intergenic	novelGene_14580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATTGTTGAGAAT	NA	False	NA	NA	False	NA	NA	NA	24945593	24945770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_24945600_24945800
ES.17573.1	chr19	+	7694	48	FSM	ENSMUSG00000052085.8	ENSMUST00000025831.8	7805	48	-208	319	-208	-319	multi-exon	TRUE	canonical	0	0	junction_1	0.679519975432822	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	24976689	25179477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_24977068_25028850_25028954_25038471_25038648_25042751_25042824_25055443_25055568_25057122_25057339_25063543_25063630_25065033_25065101_25067254_25067405_25071702_25071784_25072849_25073010_25074775_25074913_25076956_25077051_25078215_25078379_25096775_25096894_25098477_25098549_25099749_25099889_25100503_25100606_25104431_25104528_25104839_25105075_25107714_25107880_25109427_25109601_25114680_25114777_25117432_25117529_25124658_25124809_25127146_25127261_25131508_25131665_25133247_25133388_25135716_25135887_25138379_25138520_25140304_25140488_25140811_25140942_25141684_25141773_25146766_25146864_25148864_25149000_25149820_25149974_25151537_25151697_25152723_25152825_25154191_25154385_25158925_25159070_25160324_25160457_25160852_25160988_25162214_25162305_25165700_25165938_25169550_25169695_25170772_25170880_25177737_25177909_25178350
ES.17573.2	chr19	+	177	1	Intergenic	novelGene_14582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4974	False	NA	NA	False	NA	NA	NA	25102857	25103034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25102900_25103000
ES.17574.1	chr19	-	181	1	Intergenic	novelGene_14581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACATCTCAGGGT	2859	False	NA	NA	False	NA	NA	NA	25000063	24999882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_24999900_25000100
ES.17575.1	chr19	+	177	1	Intergenic	novelGene_14583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTCTAA	5801	False	NA	NA	False	NA	NA	NA	25180885	25181062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25180900_25181100
ES.17576.1	chr19	+	716	2	Intergenic	novelGene_14584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAGATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	25205584	25206968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25205859_25206526
ES.17577.1	chr19	+	5591	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-275	4	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	13.2338994508254	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCCCTGCTTCATCAC	NA	False	NA	10	True	AATAAA	-19	NA	25214063	25411864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.10	chr19	+	7508	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-203	1	intron_retention	FALSE	canonical	3	46	junction_1	13.5981514266544	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214135	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.11	chr19	+	5263	12	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.152066455059	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214139	25411860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.13	chr19	+	2514	12	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.1703154422405	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	8	True	AATAAA	-17	NA	25214331	25411862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25355774_25355895_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.14	chr19	+	5389	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.6490703299292	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214334	25411860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25255502_25255704_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.15	chr19	+	5194	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.5104882032585	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214334	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.16	chr19	+	5392	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	21.5213072713222	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214338	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.17	chr19	+	5538	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	22.5862544236287	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214351	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25214682_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.18	chr19	+	6417	21	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.893461480322	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCCCTGCTTCATCA	NA	False	NA	9	True	AATAAA	-18	NA	25214353	25411863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214444_25214534_25214682_25252111_25252199_25295668_25295797_25342666_25342774_25343814_25343906_25343996_25344261_25344377_25344517_25344783_25344911_25345007_25345163_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.19	chr19	+	5232	12	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	37	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.0775537525323	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214375	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25214682_25252111_25252199_25295668_25295797_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.2	chr19	+	5760	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-247	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.6525935444266	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCCCTGCTTCATCAC	NA	False	NA	10	True	AATAAA	-19	NA	25214091	25411864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25214682_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.20	chr19	+	5045	12	NNC	ENSMUSG00000032702.17	novel	583	3	NA	NA	446	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.5233089675634	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTTGCTTGCCCCTG	NA	False	NA	1	True	AATAAA	-10	NA	25214784	25411855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214915_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.21	chr19	+	5361	14	NNC	ENSMUSG00000032702.17	novel	583	3	NA	NA	507	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	21.8263724091838	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214845	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214915_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.22	chr19	+	5108	13	NNC	ENSMUSG00000032702.17	novel	583	3	NA	NA	514	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	25.6302501396733	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214852	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214915_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.23	chr19	+	5388	14	NNC	ENSMUSG00000032702.17	novel	583	3	NA	NA	520	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.2888514600525	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214858	25411860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214953_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.24	chr19	+	5298	13	ISM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	37771	-2	37771	2	3prime_fragment	FALSE	canonical	3	47	junction_3	11.4078433057651	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	8	True	AATAAA	-17	NA	25252109	25411862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.25	chr19	+	5494	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	37772	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4600831228749	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25252110	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25252199_25255502_25255704_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.26	chr19	+	172	1	Intergenic	novelGene_14586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTTAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25292332	25292504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25292300_25292500
ES.17577.27	chr19	+	5815	1	Intergenic	novelGene_14587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTGACTTTTCGTCT	NA	False	NA	NA	False	NA	NA	NA	25325833	25331648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25325800_25331600
ES.17577.28	chr19	+	5314	11	NIC	ENSMUSG00000032702.17	novel	3655	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.1072603171742	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	432	False	NA	6	True	AATAAA	-15	NA	25384042	25411860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25384398_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.29	chr19	+	5066	10	NNC	ENSMUSG00000032702.17	novel	3655	6	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	28.5804042338949	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	440	False	NA	8	True	AATAAA	-17	NA	25384050	25411862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25384402_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.3	chr19	+	5315	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-247	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	18.9839113169254	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	8	True	AATAAA	-17	NA	25214091	25411862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.31	chr19	+	5155	11	NNC	ENSMUSG00000032702.17	novel	3655	6	NA	NA	296	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3887269040432	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	748	False	NA	6	True	AATAAA	-15	NA	25384358	25411860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25384555_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.32	chr19	+	3062	3	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	373	-7365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGTTTGTTTGTTTT	825	False	NA	NA	False	NA	NA	NA	25384435	25394507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25384555_25386449_25389129_25394243
ES.17577.33	chr19	+	3544	2	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	8158	1	intron_retention	FALSE	canonical	3	81	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	659	False	NA	7	True	AATAAA	-16	NA	25407760	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25410328_25410884
ES.17577.34	chr19	+	3124	1	Genic_Genomic	ENSMUSG00000032702.17	novel	NA	NA	NA	NA	10037	903	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGCTTAAAAAA	2538	False	NA	NA	False	NA	NA	NA	25409639	25412763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_25409600_25412800
ES.17577.4	chr19	+	5884	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	-246	-1	-246	1	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214092	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.5	chr19	+	5431	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-245	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.7521928812198	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCCCCTGCTTCATC	NA	False	NA	8	True	AATAAA	-17	NA	25214093	25411862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.6	chr19	+	5570	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-243	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.8592296173389	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTGCCCCTGCTTC	NA	False	NA	5	True	AATAAA	-14	NA	25214095	25411859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295652_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.7	chr19	+	5466	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-243	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0687378646225	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214095	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.8	chr19	+	5161	12	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-225	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.0454163483306	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGCTTGCCCCTGCTT	NA	False	NA	4	True	AATAAA	-13	NA	25214113	25411858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17577.9	chr19	+	5644	15	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-224	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.1823508238611	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCCCCTGCTTCAT	NA	False	NA	7	True	AATAAA	-16	NA	25214114	25411861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25342666_25342774_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ES.17578.1	chr19	-	175	1	Intergenic	novelGene_14585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	25242934	25242759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_25242800_25242900
ES.17579.1	chr19	-	3149	1	Antisense	novelGene_ENSMUSG00000032702.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25402962	25399813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_25399800_25403000
ES.17579.2	chr19	-	1726	1	Antisense	novelGene_ENSMUSG00000032702.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCTGATATCACCAGGT	NA	False	NA	NA	False	NA	NA	NA	25402965	25401239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_25401200_25403000
ES.17579.3	chr19	-	1672	2	Antisense	novelGene_ENSMUSG00000032702.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCTGATATCACCAGGT	NA	False	NA	NA	False	NA	NA	NA	25402965	25401239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_25402695_25402748
ES.1758.1	chr1	-	2286	16	NNC	ENSMUSG00000041406.15	novel	3217	25	NA	NA	92	154	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	102.077095047485	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATGCAATTCGAAACT	NA	False	NA	NA	False	AATAAA	-17	NA	163799796	163773407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163773995_163781150_163781286_163781717_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775
ES.1758.10	chr1	-	6041	12	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-1580	-252	intron_retention	FALSE	canonical	2	170	junction_6	42.585257216922	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163801468	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163784478_163785061_163785167_163786856_163786971_163788145_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775
ES.1758.13	chr1	-	2618	21	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-26206	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.0603396761887	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163848571	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163848434
ES.1758.14	chr1	-	4920	15	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-3265	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	84.1781698881265	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163803153	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163802536_163802679
ES.1758.15	chr1	-	4693	10	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	411	-252	intron_retention	FALSE	canonical	3	280	junction_6	18.4035691653736	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163799477	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163786971_163788145_163789656_163792038_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415
ES.1758.17	chr1	-	4504	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-13	-252	intron_retention	FALSE	canonical	2	170	junction_8	41.2298535826442	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163822346	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.18	chr1	-	3219	24	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-26206	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	89.2977221199029	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163848571	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163840023_163840406_163848434
ES.1758.2	chr1	-	7607	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	10	-4438	10	-3323	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAGGGGAAAGGTCAC	NA	False	NA	NA	False	AATAAA	-16	NA	163822355	163776884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.21	chr1	-	2997	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	5	-256	intron_retention	FALSE	canonical	3	213	junction_6	32.6922792715183	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTTTATTTGACA	NA	False	NA	NA	False	CATAAA	-19	NA	163822360	163781578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.22	chr1	-	4287	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	7	-256	intron_retention	FALSE	canonical	2	170	junction_7	41.471014471825	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTTTATTTGACA	NA	False	NA	NA	False	CATAAA	-19	NA	163822358	163781578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.23	chr1	-	2899	24	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-26212	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	89.5497453922174	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTTTATTTGACA	NA	False	NA	NA	False	CATAAA	-19	NA	163848577	163781578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163822940_163823001_163848434
ES.1758.25	chr1	-	4589	23	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-13	-256	intron_retention	FALSE	non_canonical	0	0	junction_7	90.9574984755277	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTTTATTTGACA	NA	False	NA	NA	False	CATAAA	-19	NA	163822346	163781578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792304_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810369_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.26	chr1	-	2909	23	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	5	-256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	71.8891047964137	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTTTATTTGACA	NA	False	NA	NA	False	CATAAA	-19	NA	163822360	163781578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817391_163822175
ES.1758.28	chr1	-	4174	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-13	-257	intron_retention	FALSE	canonical	2	170	junction_8	40.3582357156832	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATCTTTATTTGAC	NA	False	NA	NA	False	CATAAA	-18	NA	163822346	163781579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.3	chr1	-	3242	25	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	5	500	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	68.5399315889812	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAGATTAGTTCTGA	NA	False	NA	NA	False	GATAAA	-17	NA	163822360	163780822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781286_163781717_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.33	chr1	-	3923	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-5	-258	intron_retention	FALSE	canonical	2	170	junction_8	41.6327906366886	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAATCTTTATTTGA	NA	False	NA	NA	False	CATAAA	-17	NA	163822370	163781580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.35	chr1	-	4527	23	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	0	-258	intron_retention	FALSE	canonical	1	2	junction_10	72.7640815942037	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAATCTTTATTTGA	NA	False	NA	NA	False	CATAAA	-17	NA	163822365	163781580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795806_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.36	chr1	-	4004	4	NIC	ENSMUSG00000041406.15	novel	605	7	NA	NA	1252	-258	intron_retention	FALSE	canonical	3	282	junction_2	20.154955277108	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAATCTTTATTTGA	NA	False	NA	NA	False	CATAAA	-17	NA	163788340	163781580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163784478_163785061_163786971_163788145
ES.1758.37	chr1	-	2923	24	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-13	-259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.6743053621682	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAATAATCTTTATTTG	NA	False	NA	NA	False	CATAAA	-16	NA	163822346	163781581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785189_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.38	chr1	-	2911	24	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-15	-260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.6061324865996	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAATAATCTTTATTT	NA	False	NA	NA	False	CATAAA	-15	NA	163822380	163781582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782027_163782143_163784414_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.39	chr1	-	2829	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-15	-260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	73.2754341931752	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAATAATCTTTATTT	NA	False	NA	NA	False	CATAAA	-15	NA	163822380	163781582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.4	chr1	-	3162	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	5	12	5	-12	multi-exon	FALSE	canonical	2	170	junction_8	40.7878461455702	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGCACAAAATTAAGCT	NA	False	NA	NA	False	AATAGA	-17	NA	163822360	163781334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.40	chr1	-	4322	4	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	33506	263	733	258	intron_retention	FALSE	canonical	3	282	junction_3	19.6468827043885	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGAAAATAATCTTTA	NA	False	NA	NA	False	CATAAA	-12	NA	163788859	163781585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061
ES.1758.41	chr1	-	2919	23	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	5	219	intron_retention	FALSE	canonical	0	0	junction_6	67.8914574891422	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTATATTTTCATAG	NA	False	NA	NA	False	AATGAA	-17	NA	163822360	163781624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789564_163789656_163792038_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.42	chr1	-	2812	23	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	-26233	217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	71.8891047964137	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTGTATATTTTCAT	NA	False	NA	NA	False	AATGAA	-15	NA	163848598	163781626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163848434
ES.1758.43	chr1	-	2164	18	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	0	5269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	80.2554313181068	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAATTGTGTTATCTCTT	NA	False	NA	NA	False	TATAAA	-18	NA	163822333	163789411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815278_163817273_163817363_163818288_163818329_163822178
ES.1758.45	chr1	-	3018	17	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	11	9641	11	3717	5prime_fragment	FALSE	canonical	2	170	junction_1	42.4186261417081	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGCACTAATTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	163822354	163790963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.46	chr1	-	1674	14	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	19	13253	-13	105	5prime_fragment	FALSE	canonical	3	256	junction_3	32.474477916917	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTTTTAATCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	163822346	163794575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.47	chr1	-	6246	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGATTGTACTAAATTG	NA	False	NA	NA	False	AATAAA	-20	NA	163845176	163838930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_163838900_163845200
ES.1758.5	chr1	-	2983	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	-24	220	-24	-220	multi-exon	FALSE	canonical	2	170	junction_8	40.7878461455702	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGGGTGGGTATTTCT	NA	False	NA	NA	False	CATAAA	-13	NA	163822389	163781542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.6	chr1	-	3011	25	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	30	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.3107869558133	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163822303	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163785736_163785883_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.7	chr1	-	2835	23	NNC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	12	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	72.1067276007534	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163822321	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799939_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.8	chr1	-	5561	22	NIC	ENSMUSG00000041406.15	novel	3179	24	NA	NA	8	-252	intron_retention	FALSE	canonical	2	170	junction_7	41.0036224272221	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163822357	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163781909_163782905_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ES.1758.9	chr1	-	4626	2	NIC	ENSMUSG00000041406.15	novel	605	7	NA	NA	2808	-252	intron_retention	FALSE	canonical	3	282	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163786784	163781574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_163784478_163785061
ES.17580.1	chr19	+	157	1	Intergenic	novelGene_14588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAAATAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	25450787	25450944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25450800_25450900
ES.17581.1	chr19	-	121	1	Intergenic	novelGene_14589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGGAAAAAAAAATA	NA	False	NA	NA	False	AATAAA	-13	NA	25464788	25464667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_25464700_25464800
ES.17582.1	chr19	-	166	1	Intergenic	novelGene_14590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	25473238	25473072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_25473100_25473200
ES.17583.1	chr19	+	4816	5	NNC	ENSMUSG00000024837.16	novel	2340	5	NA	NA	-115	-15032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.8636733486082	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAGACTTAAATATT	NA	False	NA	NA	False	AATAAA	-17	NA	25482866	25565823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25562319
ES.17583.10	chr19	+	195	1	Intergenic	novelGene_14592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAACTAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	25502759	25502954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25502800_25503000
ES.17583.11	chr19	+	1638	4	NNC	ENSMUSG00000024837.16	novel	2340	5	NA	NA	21647	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.23024752795	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTGTGTGTATAT	NA	False	NA	9	True	AATAAA	-17	NA	25504717	25581690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25504787_25523182_25523467_25537230_25537376_25580550
ES.17583.12	chr19	+	151	1	Intergenic	novelGene_14593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	25544810	25544961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25544800_25545000
ES.17583.2	chr19	+	2477	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	-94	-43	-94	43	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTACTTGTAT	NA	False	NA	55	True	ATTAAA	-9	NA	25482887	25581736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
ES.17583.3	chr19	+	2318	6	NNC	ENSMUSG00000024837.16	novel	2340	5	NA	NA	-66	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.6294489608402	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCATTTTCTTGTGTGT	NA	False	NA	5	True	AATAAA	-13	NA	25482915	25581686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25483566_25487043_25487228_25523182_25523254_25523334_25523467_25537230_25537376_25580550
ES.17583.4	chr19	+	2590	6	NNC	ENSMUSG00000024837.16	novel	2340	5	NA	NA	17	348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.6294489608402	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTACAGAAGATTGAGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	25482998	25582041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25483566_25487043_25487228_25523182_25523254_25523334_25523467_25537230_25537376_25580550
ES.17583.5	chr19	+	1891	5	NNC	ENSMUSG00000024837.16	novel	2340	5	NA	NA	19	43	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	52.8080249583337	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTACTTGTAT	NA	False	NA	55	True	ATTAAA	-9	NA	25483000	25581736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_25483093_25487043_25487228_25523182_25523467_25537230_25537376_25580550
ES.17583.6	chr19	+	2542	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	41	-243	41	243	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATCGTATAGCGGTAT	NA	False	NA	NA	False	TATAAA	-13	NA	25483022	25581936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
ES.17583.8	chr19	+	2437	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	251	-348	162	348	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTACAGAAGATTGAGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	25483232	25582041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
ES.17583.9	chr19	+	169	1	Intergenic	novelGene_14591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGCAAGTGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	25495664	25495833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_25495700_25495800
ES.17584.1	chr19	+	2490	3	NIC	ENSMUSG00000042372.6	novel	2391	2	NA	NA	-83	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTGATGTCTTTTC	NA	False	NA	16	True	AATAAA	-12	NA	25587581	25601284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25587719_25587937_25588632_25599625
ES.17584.2	chr19	+	1931	3	NIC	ENSMUSG00000042372.6	novel	2391	2	NA	NA	-54	-531	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCCTGCACTCCACTGG	NA	False	NA	NA	False	AATAAA	-15	NA	25587610	25600754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_25587719_25587937_25588632_25599625
ES.17584.3	chr19	+	2422	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	-32	1	-32	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTGATGTCTTTTC	NA	False	NA	16	True	AATAAA	-12	NA	25587868	25601284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25588632_25599625
ES.17584.4	chr19	+	4082	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	2	-1693	2	1693	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTACGTGATACTGAGA	NA	False	NA	NA	False	NA	NA	NA	25587902	25602978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25588632_25599625
ES.17585.1	chr19	-	2808	1	Antisense	novelGene_ENSMUSG00000042372.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGAAGGCAGCAGGAAGC	NA	False	NA	NA	False	TTTAAA	-12	NA	25600432	25597624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_25597600_25600400
ES.17586.1	chr19	+	2338	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	-5	4	-5	-4	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTATTTGTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	25649769	25656351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
ES.17587.1	chr19	-	1007	2	Intergenic	novelGene_14594	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTGTGTTTATAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	25706627	25683161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_25683838_25706296
ES.17588.1	chr19	+	168	1	Intergenic	novelGene_14595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAGAAACGTGCATC	NA	False	NA	NA	False	NA	NA	NA	26254707	26254875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_26254700_26254900
ES.17589.1	chr19	+	5921	33	FSM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	-1	1	1	-1	multi-exon	FALSE	canonical	2	6	junction_1	7.35245494715881	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26582450	26755720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.10	chr19	+	5850	34	NNC	ENSMUSG00000024921.18	novel	2018	8	NA	NA	-317	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7.85520947436375	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGTGTTGGTACTTT	NA	False	NA	17	True	AATAAA	-18	NA	26584352	26755675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26584456_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.11	chr19	+	6155	33	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	-143	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	6.89535339467819	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26584526	26755720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.12	chr19	+	6098	33	NNC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	7.8451816422566	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGCCTTTTCTTTTAT	NA	False	NA	64	True	AATAAA	-19	NA	26584591	26755722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661202_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.13	chr19	+	6046	34	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	2	7	junction_28	7.35034340758079	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTTGGTACTTTCCT	NA	False	NA	20	True	AATAAA	-21	NA	26584647	26755678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.14	chr19	+	5737	32	ISM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	14630	4	-3773	-4	3prime_fragment	FALSE	canonical	2	10	junction_9	6.88072909526412	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTCTGTCGCCTTTTCT	NA	False	NA	59	True	AATAAA	-14	NA	26597081	26755717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.15	chr19	+	3931	24	ISM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	58997	49	-7049	-1	3prime_fragment	FALSE	canonical	2	10	junction_1	7.04830752318589	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATGTGGTGTTGGTAC	NA	False	NA	14	True	AATAAA	-15	NA	26641448	26755672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.16	chr19	+	3038	16	NNC	ENSMUSG00000024921.18	novel	5921	33	NA	NA	911	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.98789309138812	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTGGTGTTGGTACT	NA	False	NA	15	True	AATAAA	-16	NA	26659320	26755673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675905_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.17	chr19	+	2051	9	NNC	ENSMUSG00000024921.18	novel	876	7	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	7.69740215917033	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26693326	26755720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26693393_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.18	chr19	+	4537	7	ISM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	113047	1	1984	-1	3prime_fragment	FALSE	canonical	3	30	junction_2	2.54405625374562	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26695498	26755720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.19	chr19	+	1217	3	ISM	ENSMUSG00000024921.18	ENSMUST00000177484.3	736	6	3680	-841	2575	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTGGTGTTGGTACT	610	False	NA	15	True	AATAAA	-16	NA	26751570	26755673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_26751706_26753500_26753644_26754734
ES.17589.2	chr19	+	5941	34	FSM	ENSMUSG00000024921.18	ENSMUST00000176030.8	5862	34	-36	-43	31	-3	multi-exon	FALSE	canonical	2	6	junction_1	7.73172777101398	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTCGCCTTTTCTT	NA	False	NA	60	True	AATAAA	-15	NA	26582482	26755718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.3	chr19	+	5350	4	ISM	ENSMUSG00000024921.18	ENSMUST00000176030.8	5862	34	-28	142790	-28	4423	5prime_fragment	FALSE	canonical	2	6	junction_1	6.59966329107444	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAACTATCCTTCAC	NA	False	NA	NA	False	AATAAA	-30	NA	26582490	26612885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069
ES.17589.4	chr19	+	4611	28	NNC	ENSMUSG00000024921.18	novel	5921	33	NA	NA	-28	12763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	6.44146376364731	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCAGTGTGCTCTCGG	NA	False	NA	NA	False	GATAAA	-11	NA	26582490	26701059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26700641
ES.17589.5	chr19	+	5674	32	NIC	ENSMUSG00000024921.18	novel	5862	34	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	7.78282214235169	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGTGTTGGTACTTT	NA	False	NA	17	True	AATAAA	-18	NA	26582509	26755675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26754734
ES.17589.6	chr19	+	6036	33	NNC	ENSMUSG00000024921.18	novel	2018	8	NA	NA	-514	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7.49478985696063	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTCGCCTTTTCTT	NA	False	NA	60	True	AATAAA	-15	NA	26584155	26755718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26584456_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.8	chr19	+	6037	33	NNC	ENSMUSG00000024921.18	novel	2018	8	NA	NA	-476	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.39730006832553	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTTGACTCTGTCGCCT	NA	False	NA	54	True	AATAAA	-9	NA	26584193	26755712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26584456_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624375_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ES.17589.9	chr19	+	6469	33	NNC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	-475	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	7.58332617902593	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	False	NA	62	True	AATAAA	-17	NA	26584194	26755720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753626_26754734
ES.1759.1	chr1	-	286	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAACCTT	NA	False	NA	NA	False	NA	NA	NA	163849980	163849694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_163849700_163850000
ES.17590.1	chr19	-	168	1	Intergenic	novelGene_14596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGGCATTTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	26887150	26886982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_26887000_26887200
ES.17591.1	chr19	+	3361	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-206	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	27194213	27227156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.10	chr19	+	3120	18	NIC	ENSMUSG00000024924.15	novel	4895	17	NA	NA	-121	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	9.17496216863305	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGGTTTTGATTAT	NA	False	NA	NA	False	ATTAAA	-10	NA	27194298	27227154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.11	chr19	+	4559	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	-43	-661	-43	661	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAATGTGGCTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	27194376	27227923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.12	chr19	+	3875	19	FSM	ENSMUSG00000024924.15	ENSMUST00000167487.8	7971	19	-380	4476	-43	0	multi-exon	FALSE	canonical	3	7	junction_15	10.2837820299492	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGGTTTTGATTATT	NA	False	NA	NA	False	ATTAAA	-11	NA	27194376	27227155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
ES.17591.13	chr19	+	3782	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	-31	104	-31	3	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTTTTGATTATTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	27194388	27227158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.14	chr19	+	4901	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	-20	-1026	-20	1026	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAAACC	NA	False	NA	NA	False	AAAAAG	-13	NA	27194399	27228288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.15	chr19	+	3348	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	9.38675189355248	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	27194410	27227156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194533_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.16	chr19	+	3622	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	5	228	5	-93	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAACTAATTTTGTACG	NA	False	NA	NA	False	GATAAA	-40	NA	27194424	27227034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.17	chr19	+	3425	20	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	11.602607405879	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGATTATTCCTCTAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	27194424	27227163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194533_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
ES.17591.18	chr19	+	4988	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	5	-1138	5	1138	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGAGTATTGTTGAGTAT	NA	False	NA	NA	False	ATTAAA	-5	NA	27194424	27228400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.19	chr19	+	7792	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	12	-10	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	9.38675189355248	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTGTTGCAAAGTCTA	NA	False	NA	3	True	AATAAA	-14	NA	27194431	27231621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194533_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.2	chr19	+	4533	18	NNC	ENSMUSG00000024924.15	novel	3253	18	NA	NA	-176	1	intron_retention	FALSE	canonical	0	0	junction_3	13.1662250082876	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	27194243	27227156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212250_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218699_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27224491_27225256_27225427_27226504
ES.17591.20	chr19	+	7870	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	345	-4360	8	-9	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGTTGCAAAGTCTAC	NA	False	NA	4	True	AATAAA	-15	NA	27194764	27231622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.21	chr19	+	4303	6	ISM	ENSMUSG00000024924.15	ENSMUST00000164509.8	4895	17	26293	-1237	4003	1130	3prime_fragment	FALSE	canonical	3	32	junction_3	5.98665181883831	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTGACCGAGTATTG	2619	False	NA	NA	False	TATAAA	-13	NA	27220176	27228392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_27220584_27221157_27221298_27221598_27221741_27222934_27224491_27225256_27225427_27226504
ES.17591.3	chr19	+	3259	19	NIC	ENSMUSG00000024924.15	novel	4895	17	NA	NA	-174	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	11.5854314646552	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGTTTTGATTATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	27194245	27227156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
ES.17591.4	chr19	+	7799	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-174	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCAAAGTCTACTTTT	NA	False	NA	8	True	AATAAA	-19	NA	27194245	27231626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.5	chr19	+	7641	18	NIC	ENSMUSG00000024924.15	novel	4895	17	NA	NA	-174	-9	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	9.17496216863305	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGTTGCAAAGTCTAC	NA	False	NA	4	True	AATAAA	-15	NA	27194245	27231622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.7	chr19	+	3086	18	NIC	ENSMUSG00000024924.15	novel	4895	17	NA	NA	-152	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	11.1199810808631	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGGTTTTGATTAT	NA	False	NA	NA	False	ATTAAA	-10	NA	27194267	27227154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218699_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.8	chr19	+	3177	18	NIC	ENSMUSG00000024924.15	novel	3855	18	NA	NA	-140	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	11.4468835002595	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGATTATTCCTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	27194279	27227161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17591.9	chr19	+	4537	19	NIC	ENSMUSG00000024924.15	novel	7971	19	NA	NA	-133	1143	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	9.07309140559716	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTTGAGTATTGCTA	NA	False	NA	NA	False	ATTAAA	-10	NA	27194286	27228405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_27194349_27194942_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ES.17592.1	chr19	-	3468	1	Intergenic	novelGene_14597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACACCAAGTCCCAGCA	NA	False	NA	NA	False	AATAAA	-9	NA	27363529	27360061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_27360100_27363500
ES.17592.11	chr19	-	3494	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	357.725620241495	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTTGTTTGTTTGTT	NA	False	NA	-2	True	NA	NA	NA	27407235	27366099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393355_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.13	chr19	-	3855	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_17	358.726852935909	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTATTTGTTTGTTTG	NA	False	NA	-4	True	NA	NA	NA	27407189	27366101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406767
ES.17592.16	chr19	-	3379	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-37	129	-37	-129	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGACTGTTTTGAAAT	NA	False	NA	NA	False	AATAAA	-45	NA	27407262	27366226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.17	chr19	-	3309	17	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-20	-144	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	366.907382514648	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCTTGCTATGTAGCTC	NA	False	NA	NA	False	AATAAA	-30	NA	27404529	27366241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393355_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ES.17592.19	chr19	-	2294	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-118	1295	-118	-16	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGCCCAGGTGTGT	NA	False	NA	51	True	NA	NA	NA	27407343	27367392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.2	chr19	-	4585	1	Genic_Genomic	ENSMUSG00000041360.9	novel	NA	NA	NA	NA	9897	3792	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAGACAGAA	NA	False	NA	NA	False	TTTAAA	-11	NA	27366890	27362305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_27362300_27366900
ES.17592.20	chr19	-	4478	18	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	29	8	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	362.417870424139	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGTTTAATGTCAACT	NA	False	NA	-9	True	TATAAA	-18	NA	27407191	27367452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27404795
ES.17592.22	chr19	-	4746	17	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	32	1356	27	7	intron_retention	FALSE	canonical	3	1425	junction_9	73.1752765198055	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407193	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ES.17592.23	chr19	-	2574	19	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	30	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	480.138778806274	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407190	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27404795_27404866_27406767
ES.17592.24	chr19	-	2160	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-30	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	357.725620241495	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407255	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393355_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.26	chr19	-	2508	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	26	7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_17	358.726852935909	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407194	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406767
ES.17592.27	chr19	-	2100	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	364.504033326682	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407221	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376501_27377085_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.28	chr19	-	4651	17	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-37	7	intron_retention	FALSE	canonical	3	1256	junction_16	95.0531923451285	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTTTAATGTCAAC	NA	False	NA	-10	True	TATAAA	-17	NA	27407262	27367453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.29	chr19	-	9956	13	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-31	6	intron_retention	FALSE	canonical	3	1256	junction_12	108.852442171348	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTGGTTTAATGTCAA	NA	False	NA	-11	True	TATAAA	-16	NA	27407256	27367454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27377222_27389581_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.3	chr19	-	6625	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-10	-3144	-10	3144	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCTTGATAGAAATAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	27407235	27362953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.30	chr19	-	2073	17	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-20	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	373.422096962673	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTGGTTTAATGTCAA	NA	False	NA	-11	True	TATAAA	-16	NA	27404529	27367454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371645_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ES.17592.31	chr19	-	5816	4	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-2947	6	intron_retention	FALSE	canonical	3	1510	junction_3	35.5183833465933	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTTGGTTTAATGTCAA	NA	False	NA	-11	True	TATAAA	-16	NA	27379734	27367454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27376505_27377078
ES.17592.34	chr19	-	6537	16	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-6	5	intron_retention	FALSE	canonical	3	1256	junction_15	83.0328984332248	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTTGGTTTAATGTCA	NA	False	NA	-12	True	TATAAA	-15	NA	27407231	27367455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.35	chr19	-	4571	16	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-26	5	intron_retention	FALSE	canonical	1	11	junction_10	385.057686875905	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTTGGTTTAATGTCA	NA	False	NA	-12	True	TATAAA	-15	NA	27407251	27367455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.36	chr19	-	4727	9	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-20	4	intron_retention	FALSE	canonical	0	0	junction_1	514.029911581029	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTTTGGTTTAATGTC	NA	False	NA	-13	True	TATAAA	-14	NA	27404529	27367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27400148_27400905_27403415_27404436
ES.17592.37	chr19	-	3311	17	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-24	4	intron_retention	FALSE	canonical	3	1256	junction_16	96.1668471979819	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTTTGGTTTAATGTC	NA	False	NA	-13	True	TATAAA	-14	NA	27407249	27367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.38	chr19	-	2114	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	362.6245448858	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407224	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373687_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.39	chr19	-	2142	19	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	480.138778806274	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407194	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27404795_27404840_27407170
ES.17592.4	chr19	-	5037	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	0	-1566	0	1566	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATCTCTTGATGCCTC	NA	False	NA	NA	False	NA	NA	NA	27407225	27364531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.40	chr19	-	1709	15	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	398.531001533975	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27404529	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ES.17592.42	chr19	-	3264	16	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-41	0	intron_retention	FALSE	canonical	3	1256	junction_15	99.224101014936	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407266	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.46	chr19	-	1966	16	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	384.580949432843	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407262	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.48	chr19	-	2239	19	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	480.605035988268	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407220	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406848_27406985_27407191
ES.17592.5	chr19	-	3993	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-37	-485	-37	485	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGGTGTATGCATTCC	NA	False	NA	NA	False	NA	NA	NA	27407262	27365612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.53	chr19	-	2065	17	NIC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_11	372.936133104584	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407249	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.54	chr19	-	4715	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-38	0	intron_retention	FALSE	canonical	1	1	junction_7	492.628968939162	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407263	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27395604_27395675_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.55	chr19	-	1758	16	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	509.406696287183	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407233	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398869_27399754_27399822_27400053_27400148_27400905_27400982_27404436_27404529_27407191
ES.17592.56	chr19	-	2112	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	489.11161610657	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407235	27367460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398869_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404522_27407187
ES.17592.59	chr19	-	2766	13	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-32	22060	-32	-1028	5prime_fragment	FALSE	canonical	3	1256	junction_12	105.984275563249	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTGGCCTATTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	27407257	27388157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.6	chr19	-	4328	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	42	480	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_17	358.726852935909	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGCAGAGGTGTATGC	NA	False	NA	NA	False	NA	NA	NA	27407178	27365617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406767
ES.17592.60	chr19	-	4591	12	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	4	23822	-1	-2790	5prime_fragment	FALSE	canonical	3	1256	junction_11	110.265644679992	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGTTTCTGGGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	27407221	27389919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.61	chr19	-	2429	12	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-9	25997	-9	646	5prime_fragment	FALSE	canonical	3	1256	junction_11	110.265644679992	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTGGCCAATTCATT	NA	False	NA	NA	False	AATAAA	-33	NA	27407234	27392094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.62	chr19	-	1808	12	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-37	26646	-37	-3	5prime_fragment	FALSE	canonical	3	1256	junction_11	110.265644679992	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAATGTGGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	27407262	27392743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.63	chr19	-	1486	10	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-33	29720	-33	0	5prime_fragment	FALSE	canonical	3	1256	junction_9	97.4371592360943	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	TTTAAA	-3	NA	27407258	27395817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.8	chr19	-	3814	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-25	-318	-25	318	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAGTGTGTACTTGAA	NA	False	NA	NA	False	AGTAAA	-17	NA	27407250	27365779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17592.9	chr19	-	3562	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	-38	-53	-38	53	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAGAAGAGGGCATCAG	NA	False	NA	53	True	NA	NA	NA	27407263	27366044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ES.17593.1	chr19	-	9293	18	NIC	ENSMUSG00000040929.18	novel	2621	19	NA	NA	-49	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_16	3.2899132833199	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCTTGGATTTTTT	NA	False	NA	0	True	AATAAA	-24	NA	27988615	27739122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27746094_27748028_27748072_27764013_27764168_27771010_27771220_27777516_27777667_27779781_27779880_27783587_27783743_27784192_27784309_27790977_27791091_27792884_27793007_27803432_27803553_27808010_27808193_27814806_27814882_27827110_27827370_27844912_27845011_27878178_27878304_27900607_27900667_27988371
ES.17593.2	chr19	-	4735	1	ISM	ENSMUSG00000040929.18	ENSMUST00000165566.8	9146	18	215528	965	69426	-959	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTTGCTTTATCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27744820	27740085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_27740100_27744800
ES.17593.3	chr19	-	6967	17	NNC	ENSMUSG00000040929.18	novel	9146	18	NA	NA	-57	-964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.35177191944798	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATGGTTGCCTTGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	27988623	27740090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_27744787_27748028_27748072_27764013_27764168_27771010_27771220_27777516_27777667_27779781_27779880_27783587_27783743_27784192_27784309_27790977_27791091_27792884_27793007_27803432_27803553_27808010_27808193_27814806_27814882_27827110_27827370_27844912_27845011_27878178_27878304_27988371
ES.17593.4	chr19	-	2761	17	FSM	ENSMUSG00000040929.18	ENSMUST00000174850.8	2743	17	-24	6	2	-4	multi-exon	FALSE	canonical	0	0	junction_16	2.87160125191504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTATTGTTGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	27988564	27745544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_27746094_27748028_27748072_27764013_27764168_27771010_27771220_27777516_27777667_27779781_27779880_27783587_27783743_27784192_27784309_27790977_27791091_27792884_27793007_27803432_27803553_27808010_27808193_27814806_27814882_27827110_27827370_27844912_27845011_27878178_27878304_27988371
ES.17593.5	chr19	-	3171	1	NIC	ENSMUSG00000040929.18	novel	9146	18	NA	NA	32463	3930	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	27781783	27778612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_27778600_27781800
ES.17594.1	chr19	+	4391	1	Intergenic	novelGene_14598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	27989032	27993423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_27989000_27993400
ES.17595.1	chr19	-	149	1	Intergenic	novelGene_14599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCAGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	28165546	28165397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_28165400_28165500
ES.17596.1	chr19	+	163	1	Intergenic	novelGene_14600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	28198468	28198631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28198500_28198600
ES.17597.1	chr19	+	177	1	Intergenic	novelGene_14601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	28311476	28311653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28311500_28311700
ES.17598.1	chr19	+	3047	1	Intergenic	novelGene_14603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAAAACTTAGAA	NA	False	NA	NA	False	NA	NA	NA	28460804	28463851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28460800_28463900
ES.17598.2	chr19	+	2907	1	Intergenic	novelGene_14602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCATG	NA	False	NA	NA	False	NA	NA	NA	28460804	28463711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28460800_28463700
ES.17599.1	chr19	+	181	1	Intergenic	novelGene_14604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATTTTGTTAAATAC	NA	False	NA	NA	False	NA	NA	NA	28467620	28467801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28467600_28467800
ES.176.1	chr1	+	179	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21405207	21405386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_21405200_21405400
ES.1760.1	chr1	+	179	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTTAA	3982	False	NA	NA	False	NA	NA	NA	163955313	163955492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_163955300_163955500
ES.1760.2	chr1	+	161	2	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	3984	False	NA	NA	False	NA	NA	NA	163955315	163956411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_163955386_163956320
ES.17600.1	chr19	+	1254	1	Intergenic	novelGene_14605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTAGTCTAGAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	28613964	28615218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28614000_28615200
ES.17601.1	chr19	+	183	1	Intergenic	novelGene_14606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAGCTCATTAAA	NA	False	NA	3	True	NA	NA	NA	28638108	28638291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28638100_28638300
ES.17602.1	chr19	-	7684	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	-170	0	-170	0	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTATTCTATTAATCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	28657647	28236250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
ES.17602.11	chr19	-	6235	9	NNC	ENSMUSG00000052942.14	novel	2438	9	NA	NA	-25264	-354	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	4.96078370824611	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTCCCGCCTGAAGCG	NA	False	NA	NA	False	AATAAA	-16	NA	28543084	28236604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28542835
ES.17602.12	chr19	-	6957	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	-179	736	-179	-736	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGAAGCGTCCTCAGTA	NA	False	NA	NA	False	AATGAA	-19	NA	28657656	28236986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
ES.17602.13	chr19	-	4892	10	FSM	ENSMUSG00000052942.14	ENSMUST00000065113.14	3382	10	-568	-942	-157	925	multi-exon	FALSE	canonical	0	0	junction_8	5.37024265493092	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGCTCAGTATCTCTT	NA	False	NA	NA	False	AATAGA	-23	NA	28657634	28238821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28643152_28643637_28656995
ES.17602.14	chr19	-	5756	7	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	-20427	36122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.81894409826699	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAATAGTGTTTCAT	NA	False	NA	NA	False	AATAAA	-25	NA	28538247	28290850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28537515_28537643_28538176
ES.17602.15	chr19	-	1607	3	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	-170	-63895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTTTAAAACTAGTC	NA	False	NA	NA	False	AATAAA	-19	NA	28657647	28573141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28573613_28643152_28643637_28656995
ES.17602.16	chr19	-	5993	1	Antisense	novelGene_ENSMUSG00000097735.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	28655801	28649808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_28649800_28655800
ES.17602.2	chr19	-	6522	9	NNC	ENSMUSG00000052942.14	novel	2438	9	NA	NA	-16037	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.19615242270663	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTGGTTATTCTAT	NA	False	NA	NA	False	AATAAA	-45	NA	28533857	28236257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28533668
ES.17602.3	chr19	-	6835	11	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	17769	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.52177507691141	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATTGGTTATTCTA	NA	False	NA	NA	False	AATAAA	-44	NA	28626316	28236258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28604986_28605194_28626228
ES.17602.4	chr19	-	7455	10	FSM	ENSMUSG00000052942.14	ENSMUST00000065113.14	3382	10	-583	-3490	-172	-23	multi-exon	FALSE	canonical	0	0	junction_8	5.37024265493092	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTTTATACATGTT	NA	False	NA	NA	False	AATAAA	-29	NA	28657649	28236273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28643152_28643637_28656995
ES.17602.5	chr19	-	6718	10	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	16208	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.90904934097212	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTTTATACATGTT	NA	False	NA	NA	False	AATAAA	-29	NA	28627877	28236273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28627684
ES.17602.6	chr19	-	7669	12	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	-1	-28	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.97653815050676	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTAAAGCTTTTATAC	NA	False	NA	NA	False	AATAAA	-24	NA	28657478	28236278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28240958_28241141_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
ES.17602.7	chr19	-	6607	10	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	17769	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.90904934097212	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTAAAGCTTTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	28626316	28236279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28626228
ES.17602.8	chr19	-	6305	10	NNC	ENSMUSG00000052942.14	novel	7514	11	NA	NA	15743	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.90904934097212	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGCGTTGTTTGTTTGT	NA	False	NA	NA	False	AAAACA	-8	NA	28628342	28236551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28628284
ES.17602.9	chr19	-	7380	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	-167	301	-167	-301	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGGCGTTGTTTGTTTGT	NA	False	NA	NA	False	AAAACA	-8	NA	28657644	28236551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
ES.17603.1	chr19	+	177	1	Intergenic	novelGene_14607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28676742	28676919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28676700_28676900
ES.17604.1	chr19	+	2423	2	Antisense	novelGene_ENSMUSG00000067351.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAACAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	28716285	28725117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_28716411_28722819
ES.17605.1	chr19	+	324	1	Intergenic	novelGene_14608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	28750447	28750771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28750400_28750800
ES.17605.2	chr19	+	177	2	Intergenic	novelGene_14610	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTAGTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-5	NA	28750448	28757324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28750604_28757302
ES.17605.3	chr19	+	191	1	Intergenic	novelGene_14609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCGCAGTACTCGAAGG	NA	False	NA	NA	False	NA	NA	NA	28750448	28750639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28750400_28750600
ES.17605.5	chr19	+	504	1	Intergenic	novelGene_14611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATATGAAT	NA	False	NA	NA	False	NA	NA	NA	28750450	28750954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28750400_28751000
ES.17606.1	chr19	+	2500	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	-21	1321	4	1	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCAGCTTCCCTTGTACTT	NA	False	NA	5	True	AATGAA	-16	NA	28812452	28890039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17606.2	chr19	+	3799	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	1	0	1	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCTCTCATCTGT	NA	False	NA	17	True	AATAAA	-27	NA	28812474	28891360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17606.3	chr19	+	3329	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	39	432	-22	-432	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATAACAGCCGTGTTTC	NA	False	NA	NA	False	AATAAA	-35	NA	28812512	28890928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17606.4	chr19	+	3686	13	NNC	ENSMUSG00000024935.12	novel	3800	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	23.0547355945223	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTGCCTCTCATCT	NA	False	NA	15	True	AATAAA	-25	NA	28812536	28891358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053_28889938_28889986
ES.17606.5	chr19	+	1756	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	124	1920	63	163	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTATATTTGACTTTA	NA	False	NA	NA	False	GATAAA	-15	NA	28812597	28889440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17606.6	chr19	+	170	1	Intergenic	novelGene_14612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGTCAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	28833303	28833473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28833300_28833500
ES.17606.7	chr19	+	1738	12	NNC	ENSMUSG00000024935.12	novel	2665	9	NA	NA	-14332	252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.078727623505	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGATTTTCTAATTCTA	NA	False	NA	NA	False	AAGAAA	-9	NA	28856080	28889529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28856109_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17606.8	chr19	+	4393	10	ISM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	56767	1	-1172	-1	3prime_fragment	FALSE	canonical	3	74	junction_6	5.78204970278119	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCCTCTCATCTG	NA	False	NA	16	True	AATAAA	-26	NA	28869240	28891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ES.17607.1	chr19	+	245	1	Intergenic	novelGene_14613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAACCTCAAAAC	5104	False	NA	NA	False	NA	NA	NA	28898145	28898390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28898100_28898400
ES.17608.1	chr19	-	157	1	Intergenic	novelGene_14614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28899868	28899711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_28899700_28899900
ES.17609.1	chr19	-	5579	3	NNC	ENSMUSG00000064202.16	novel	384	5	NA	NA	91	-9230	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTCTATCTCAGAGCC	NA	False	NA	NA	False	NA	NA	NA	28941217	28935360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_28938400_28938584_28941074_28941166
ES.1761.1	chr1	+	6590	20	ISM	ENSMUSG00000026579.9	ENSMUST00000086040.6	7430	25	27515	-9	27515	9	3prime_fragment	FALSE	canonical	0	0	junction_1	0.748035284397468	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTCTGATTCTCCATTAG	NA	False	NA	NA	False	AATAAA	-26	NA	164006921	164047855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_164007147_164009180_164009347_164010385_164010564_164012076_164012177_164012480_164012693_164014335_164014487_164017680_164017894_164019495_164022203_164023119_164023295_164026280_164026518_164029090_164029299_164032350_164032531_164034578_164034696_164035420_164035493_164036505_164036610_164037031_164037188_164039316_164039462_164041943_164042096_164044935_164045119_164046946
ES.1761.2	chr1	+	233	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATCCAAGGAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	164024521	164024754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164024500_164024800
ES.17610.1	chr19	+	2966	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	-118	11	-118	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGTGAAATCTTTAATT	NA	False	NA	NA	False	AATAAA	-24	NA	28941234	28944200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28941200_28944200
ES.17610.2	chr19	+	1338	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	-4	1525	-4	-1525	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAATTTTAAAGTTC	NA	False	NA	NA	False	AGTAAA	-5	NA	28941348	28942686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28941300_28942700
ES.17611.1	chr19	+	2418	1	Intergenic	novelGene_14615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCTGTGCCTACTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	28945790	28948208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_28945800_28948200
ES.17612.1	chr19	+	2787	7	NNC	ENSMUSG00000024780.8	novel	5179	7	NA	NA	-14	978	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	71.3755716069736	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCAGTGCTCACTGGC	3807	False	NA	22	True	AATAAA	-16	NA	28967737	28994970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993292
ES.17612.10	chr19	+	3771	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	17	291	2	-291	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTTTTAAGTTTTATG	3838	False	NA	NA	False	AATACA	-30	NA	28967768	28992880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.11	chr19	+	4045	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	18	16	3	-16	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAAGAGATAAGAGGGG	3839	False	NA	NA	False	ATTAAA	-12	NA	28967769	28993155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.12	chr19	+	1667	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-115	3627	4	18	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGTAAGCTGGGTGGCA	3854	False	NA	NA	False	AATAAA	-25	NA	28967784	28994010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.13	chr19	+	3563	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	99	417	-34	218	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTTTACTCAGTAAG	3920	False	NA	NA	False	AATAAA	-16	NA	28967850	28992754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.14	chr19	+	2311	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	117	1651	-16	-1016	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGCCTAAAGCCAACA	3938	False	NA	NA	False	NA	NA	NA	28967868	28991520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.15	chr19	+	1092	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	128	2859	-5	726	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGAGATTTTTCA	3949	False	NA	NA	False	CATAAA	-6	NA	28967879	28990312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.16	chr19	+	2550	7	NNC	ENSMUSG00000024780.8	novel	5179	7	NA	NA	-2	978	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	71.352217126652	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCAGTGCTCACTGGC	3952	False	NA	22	True	AATAAA	-16	NA	28967882	28994970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989267_28989454_28993405
ES.17612.17	chr19	+	1339	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-16	3856	-1	189	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTTTGGAATCAAAGT	3953	False	NA	NA	False	ACTAAA	-17	NA	28967883	28993781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.19	chr19	+	5352	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-15	-158	0	158	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTGTGTGTGCACGG	3954	False	NA	NA	False	NA	NA	NA	28967884	28997795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.2	chr19	+	2715	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-147	2611	1	1034	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATTTGTTTTATTTTT	3822	False	NA	78	True	TTTAAA	-19	NA	28967752	28995026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.20	chr19	+	2524	1	NIC	ENSMUSG00000024780.8	novel	4079	7	NA	NA	0	-15659	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATAAGACTTGATAT	3954	False	NA	NA	False	ACTAAA	-34	NA	28967884	28970408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_28967900_28970400
ES.17612.21	chr19	+	6478	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	118	-2433	0	977	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGCAGTGCTCACTGG	3954	False	NA	21	True	AATAAA	-15	NA	28967884	28994969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
ES.17612.22	chr19	+	4667	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	118	-622	0	-13	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGATAAGAGGGGTAT	3954	False	NA	NA	False	ATTAAA	-15	NA	28967884	28993158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
ES.17612.23	chr19	+	5132	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	118	-1087	0	31	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTGAAATGTTTTGCA	3954	False	NA	NA	False	NA	NA	NA	28967884	28993623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
ES.17612.24	chr19	+	4102	7	NNC	ENSMUSG00000024780.8	novel	2944	7	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.7379490460477	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTTTCTGTGTTAG	3954	False	NA	3	True	AGTAAA	-15	NA	28967884	29004063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_29000923
ES.17612.25	chr19	+	4762	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	137	-820	4	-1	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGACCTACTTTACTA	3958	False	NA	NA	False	AATAAA	-6	NA	28967888	28993991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.26	chr19	+	6125	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-4	-942	-4	942	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGAACAAAGGCTTGAT	3965	False	NA	NA	False	AATAAA	-19	NA	28967895	28998579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.27	chr19	+	4887	5	NIC	ENSMUSG00000024780.8	novel	5179	7	NA	NA	-4250	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	77.7592438234838	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTGTAGTTATGATT	8536	False	NA	6	True	AATAAA	-17	NA	28972466	28997632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_28972723_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.28	chr19	+	8381	2	ISM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	17156	8	-3914	-8	intron_retention	FALSE	canonical	3	165	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCAAGCTGTAGTTATG	NA	False	NA	3	True	AATAAA	-14	NA	28985055	28997629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_28985096_28989288
ES.17612.29	chr19	+	11059	1	NIC	ENSMUSG00000024780.8	novel	2944	7	NA	NA	3697	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTCTGTGTTAGG	2519	False	NA	4	True	AGTAAA	-16	NA	28993005	29004064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_28993000_29004100
ES.17612.3	chr19	+	5317	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-135	-3	-2	3	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTATGATTTTGTCAGT	3834	False	NA	14	True	AATAAA	-25	NA	28967764	28997640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.30	chr19	+	1657	1	ISM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	25806	2275	4397	1370	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCGGCTGGAACTTTT	3219	False	NA	NA	False	AAGAAA	-9	NA	28993705	28995362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_28993700_28995400
ES.17612.31	chr19	+	2574	1	ISM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	26528	636	5119	-636	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGGCTTACAGTGTCAT	3941	False	NA	NA	False	NA	NA	NA	28994427	28997001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_28994400_28997000
ES.17612.4	chr19	+	5863	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	15	-1799	0	978	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCAGTGCTCACTGGC	3836	False	NA	22	True	AATAAA	-16	NA	28967766	28994970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17612.5	chr19	+	5670	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	0	-1507	0	51	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTACGTTTGTAT	3836	False	NA	NA	False	NA	NA	NA	28967766	28994043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
ES.17612.6	chr19	+	5471	7	NNC	ENSMUSG00000024780.8	novel	5179	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	71.3755716069736	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTGTAGTTATGATT	3836	False	NA	6	True	AATAAA	-17	NA	28967766	28997632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993241
ES.17612.7	chr19	+	3487	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-131	1823	2	1822	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGACTATTGTGTTTT	3838	False	NA	NA	False	AATGAA	-25	NA	28967768	28995814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.8	chr19	+	1803	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-131	3507	2	138	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGTCTCAAAACTGTT	3838	False	NA	NA	False	ATTAAA	-19	NA	28967768	28994130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ES.17612.9	chr19	+	1823	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	17	2239	2	1346	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGTCACCTGATGCG	3838	False	NA	NA	False	AATAAA	-8	NA	28967768	28990932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ES.17613.1	chr19	+	1509	1	Intergenic	novelGene_14616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTGTGTTGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	29007322	29008831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29007300_29008800
ES.17614.1	chr19	-	6191	4	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	-116	1	intron_retention	FALSE	canonical	3	29	junction_3	6.37704215656966	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTGTCTCCATGTTG	NA	False	NA	0	True	AATAAA	-17	NA	29025477	28998231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29003731_29004570_29004744_29015271_29015392_29025078
ES.17614.2	chr19	-	2896	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	-87	0	-87	0	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	29025448	28998232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ES.17614.4	chr19	-	5004	5	NNC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	111	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.3565549577098	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	29025250	28998232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29002212_29003170_29003731_29004570_29004744_29015271_29015392_29025078
ES.17614.5	chr19	-	5128	4	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	-27	-973	intron_retention	FALSE	canonical	3	29	junction_3	6.37704215656966	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAAGTGCTGGGATCA	NA	False	NA	NA	False	NA	NA	NA	29025388	28999205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29003731_29004570_29004744_29015271_29015392_29025078
ES.17614.6	chr19	-	5190	4	NNC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	20	-976	intron_retention	FALSE	canonical	0	0	junction_1	17.5562587763516	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCAAGTGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	29025341	28999208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29003731_29004458_29004744_29015271_29015392_29025078
ES.17614.7	chr19	-	1696	1	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	15	-20350	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTATCGAAAGGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	29025346	29023650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29023600_29025300
ES.17615.1	chr19	-	1738	1	Intergenic	novelGene_14617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGAGGCAGGC	NA	False	NA	NA	False	NA	NA	NA	29035036	29033298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29033300_29035000
ES.17616.1	chr19	+	2000	10	Fusion	ENSMUSG00000024785.8_ENSMUSG00000118038.2	novel	618	2	NA	NA	-31	7	multi-exon	TRUE	canonical	0	0	junction_1	163.391826260951	182	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGTGTAAATCAGAGT	NA	False	NA	34	True	CATAAA	-26	NA	29044715	29121250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_29044983_29059111_29059301_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.10	chr19	+	1355	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	66	382	66	-382	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCAGCTGCTTCTCCAA	NA	False	NA	NA	False	AATACA	-19	NA	29078840	29120861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.11	chr19	+	5709	7	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	108	0	intron_retention	FALSE	canonical	3	369	junction_1	18.9098739639727	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078882	29121243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29111904_29120541
ES.17616.12	chr19	+	7478	1	NIC	ENSMUSG00000024785.8	novel	1884	9	NA	NA	34998	7	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGTGTAAATCAGAGT	NA	False	NA	34	True	CATAAA	-26	NA	29113772	29121250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29113800_29121200
ES.17616.2	chr19	+	1938	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	-51	-84	-51	-2	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAATCTGGGATTTTAT	NA	False	NA	111	True	NA	NA	NA	29078723	29121327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.3	chr19	+	2662	11	NNC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	175.940472887849	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCACTGTAGTGTAAAT	NA	False	NA	28	True	CATAAA	-20	NA	29078765	29121244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29099430_29099479_29099809_29100611_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.4	chr19	+	2494	10	NNC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	27	33252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	123.335535515875	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGTAGGGGAAGCCGA	NA	False	NA	NA	False	AATAAA	-4	NA	29078801	29154581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541_29121139_29153758
ES.17616.5	chr19	+	3504	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	42	-1743	42	1657	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCTGTCTTGGCCTGTT	NA	False	NA	NA	False	TATAAA	-20	NA	29078816	29122986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.6	chr19	+	2179	8	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	45	0	intron_retention	FALSE	canonical	3	369	junction_1	17.8885438199983	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078819	29121243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.7	chr19	+	2066	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	55	-318	55	232	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGTCTGTTCTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	29078829	29121561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17616.9	chr19	+	4055	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	59	-2311	59	2225	multi-exon	FALSE	canonical	3	369	junction_1	16.9958634673264	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTCGGAAATGCCTCT	NA	False	NA	NA	False	AATAAA	-31	NA	29078833	29123554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ES.17617.1	chr19	-	1934	1	Antisense	novelGene_ENSMUSG00000118038.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGTCTAGACCGGAAG	NA	False	NA	NA	False	NA	NA	NA	29048215	29046281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_29046300_29048200
ES.17618.1	chr19	-	4282	1	Intergenic	novelGene_14618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29084711	29080429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29080400_29084700
ES.17619.1	chr19	-	169	1	Intergenic	novelGene_14619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAAAAATCCAGCCCG	NA	False	NA	NA	False	NA	NA	NA	29161375	29161206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29161200_29161400
ES.1762.1	chr1	+	3573	7	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-89	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.800046816469	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCAGAATTATTTTGAG	NA	False	NA	23	True	AATAAA	-25	NA	164076525	164092948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164076535_164076615_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.10	chr1	+	3587	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.915897906362	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076592	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077039_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.11	chr1	+	3467	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	-31	-4	-22	4	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTTCACTCAGAATTAT	NA	False	NA	17	True	AATAAA	-19	NA	164076592	164092942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.12	chr1	+	3826	5	NIC	ENSMUSG00000040918.13	novel	3432	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	46	junction_2	102.008271723424	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076609	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164090331_164090958
ES.1762.13	chr1	+	3934	5	NIC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	256	junction_3	15.9216833280907	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTTCCCTTTTCACT	NA	False	NA	8	True	AATAAA	-10	NA	164076610	164092933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164090331_164090958
ES.1762.14	chr1	+	3686	7	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	128.712535002099	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076611	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164081746_164081875_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.15	chr1	+	3451	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	114.179858118672	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076616	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089714_164089809_164090188_164090331_164090958
ES.1762.16	chr1	+	4886	4	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	2	-3	intron_retention	FALSE	canonical	1	8	junction_1	126.03438684211	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076616	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084388_164084919_164088360_164090331_164090958
ES.1762.17	chr1	+	3036	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.971375778681	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTTCACTCAGAATTA	NA	False	NA	16	True	AATAAA	-18	NA	164076616	164092941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084399_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.18	chr1	+	3501	7	NNC	ENSMUSG00000040918.13	novel	3432	6	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.700388143435	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076618	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084805_164088360_164088587_164088688_164088756_164089615_164089809_164090188_164090331_164090958
ES.1762.19	chr1	+	3121	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	2	309	2	-309	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGAAGTGTCATTTTGTT	NA	False	NA	NA	False	AAGAAA	-9	NA	164076625	164092629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.20	chr1	+	3521	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.314689057644	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076626	164092936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089789_164090188_164090331_164090958
ES.1762.21	chr1	+	3464	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	109.757186552863	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTTCCCTTTTCACT	NA	False	NA	8	True	AATAAA	-10	NA	164076627	164092933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084388_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.22	chr1	+	3410	6	NNC	ENSMUSG00000040918.13	novel	3432	6	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.970232731928	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTCCCTTTTCACTC	NA	False	NA	9	True	AATAAA	-11	NA	164076634	164092934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090195_164090331_164090958
ES.1762.23	chr1	+	6896	5	NNC	ENSMUSG00000040918.13	novel	3432	6	NA	NA	19	0	intron_retention	FALSE	canonical	1	8	junction_1	120.401411951854	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076642	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084388_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.24	chr1	+	6075	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	112.126000552949	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076660	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164081746_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.25	chr1	+	3549	7	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.174127574197	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164076679	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164083932_164083995_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.26	chr1	+	3187	6	NNC	ENSMUSG00000040918.13	novel	3432	6	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.479074546688	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076775	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084388_164084805_164088360_164088587_164089615_164089789_164090188_164090331_164090958
ES.1762.27	chr1	+	4379	1	NIC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-1365	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164088556	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164088600_164092900
ES.1762.28	chr1	+	2997	2	NNC	ENSMUSG00000040918.13	novel	894	5	NA	NA	-370	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCCTTTTCACTCA	NA	False	NA	10	True	AATAAA	-12	NA	164089551	164092935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164089809_164090195
ES.1762.4	chr1	+	3535	7	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-86	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	132.407724682345	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCCTTTTCACTCAG	NA	False	NA	11	True	AATAAA	-13	NA	164076528	164092936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164076538_164076618_164077026_164084338_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.5	chr1	+	3657	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	-86	0	-86	0	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTATTTTGAGTTCATC	NA	False	NA	29	True	AATAAA	-31	NA	164076528	164092954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ES.1762.6	chr1	+	3437	8	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-85	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	128.716109072229	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076529	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164076540_164076620_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958_164091347_164091468
ES.1762.7	chr1	+	3937	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-83	0	intron_retention	FALSE	non_canonical	0	0	junction_1	111.314689057644	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076531	164092938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164076540_164076620_164077026_164084315_164084919_164088360_164088587_164089615_164090331_164090958
ES.1762.9	chr1	+	3552	6	NNC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.314689057644	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTCCCTTTTCACTC	NA	False	NA	9	True	AATAAA	-11	NA	164076586	164092934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089789_164090195_164090331_164090958
ES.17620.1	chr19	+	5546	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-506	-10	-506	10	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCTGTTTTCAGTGG	NA	False	NA	NA	False	TTTAAA	-18	NA	29228721	29290490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.10	chr19	+	5277	26	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	7	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.25338718345383	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTTAAATATTTGGTA	NA	False	NA	NA	False	AATAAA	-27	NA	29229245	29290462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229924_29230203_29230483_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.11	chr19	+	4297	26	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	7	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.20486827716725	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGCTGCTCTGTTAGG	NA	False	NA	NA	False	ATTAAA	-37	NA	29229245	29289759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229920_29238437_29238539_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29259944_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.13	chr19	+	4446	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	61	523	50	217	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAACTGTCTCCAACT	NA	False	NA	NA	False	NA	NA	NA	29229288	29289957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.14	chr19	+	4844	26	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	252	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.46319088760262	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACAAGATTTTAAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	29229490	29290456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229920_29238437_29238539_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.15	chr19	+	2835	12	ISM	ENSMUSG00000024789.14	ENSMUST00000025705.7	4947	24	43026	22	42413	-22	3prime_fragment	FALSE	canonical	3	20	junction_6	5.12327374676559	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAGATTTTAAATATTT	710	False	NA	NA	False	AATAAA	-23	NA	29272253	29290458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.2	chr19	+	4570	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-280	740	-280	0	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCTTGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	29228947	29289740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.3	chr19	+	4786	26	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-222	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	8.25338718345383	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAATACCTTTTCTT	NA	False	NA	NA	False	ATTAAA	-9	NA	29229005	29289731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229924_29230203_29230483_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.4	chr19	+	4056	23	NIC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-90	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	6.9716071163774	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAATACCTTTTCTT	NA	False	NA	NA	False	ATTAAA	-9	NA	29229137	29289731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.5	chr19	+	4259	24	NIC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	6.89456101899261	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCTTGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	29229138	29289740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.6	chr19	+	4752	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	-71	349	-71	-349	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTTGTAAAATGTACAA	NA	False	NA	NA	False	ATTAAA	-19	NA	29229156	29290131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.7	chr19	+	4945	24	NIC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-58	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	6.89456101899261	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAAGATTTTAAATATT	NA	False	NA	NA	False	AATAAA	-22	NA	29229169	29290457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.8	chr19	+	4239	25	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-53	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.81794507164732	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAATACCTTTTCTT	NA	False	NA	NA	False	ATTAAA	-9	NA	29229174	29289731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29259944_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ES.17620.9	chr19	+	5412	30	NNC	ENSMUSG00000024789.14	novel	5030	25	NA	NA	-34	38609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.9578155560225	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGGAGCAGTAGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	29229193	29329089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29229519_29229836_29229924_29230203_29230483_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29259792_29259888_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140_29290480_29293950_29294025_29310019_29310079_29329059
ES.17621.1	chr19	-	3134	1	Antisense	novelGene_ENSMUSG00000024789.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGCAAACT	NA	False	NA	NA	False	NA	NA	NA	29253350	29250216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_29250200_29253400
ES.17622.1	chr19	-	5059	1	Antisense	novelGene_ENSMUSG00000024789.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGCTAACTTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	29287663	29282604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_29282600_29287700
ES.17623.1	chr19	-	201	1	Intergenic	novelGene_14620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCATTTACAGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	29306241	29306040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29306000_29306200
ES.17624.1	chr19	-	717	5	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	-10	-7	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTCAAATTTCTC	NA	False	NA	-84	True	AATAAA	-36	NA	29339283	29326083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
ES.17624.2	chr19	-	832	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	103	85	6	-7	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTCAAATTTCTC	NA	False	NA	-84	True	AATAAA	-36	NA	29339267	29326083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
ES.17624.4	chr19	-	5191	1	NIC	ENSMUSG00000016495.13	novel	1020	6	NA	NA	-2029	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCATGGCAGTATTCT	3355	False	NA	-104	True	AATAAA	-16	NA	29331294	29326103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29326100_29331300
ES.17624.5	chr19	-	574	4	FSM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	2	28	2	0	multi-exon	FALSE	canonical	2	8	junction_1	25.1042271783503	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	False	NA	-105	True	AATAAA	-15	NA	29339271	29326104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29326406_29335716_29335804_29338216_29338328_29339196
ES.17624.6	chr19	-	4071	3	NNC	ENSMUSG00000016495.13	novel	653	5	NA	NA	-23	3050	intron_retention	TRUE	non_canonical	0	0	junction_1	32	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTTTTGAGAATTTCA	NA	False	NA	NA	False	AAAAAG	-35	NA	29339247	29332725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29335202_29335239_29335804_29338216
ES.17625.1	chr19	+	3710	6	NNC	ENSMUSG00000016496.8	novel	3622	7	NA	NA	-5467	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTTCTTTTTTTT	4985	False	NA	NA	False	AATAAA	-18	NA	29339387	29365495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29339594_29350957_29351300_29357703_29357989_29359875_29359987_29361483_29361544_29362789
ES.17626.1	chr19	-	251	1	Intergenic	novelGene_14621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTTTGTGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	29473316	29473065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29473100_29473300
ES.17627.1	chr19	+	7337	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	-219	72	-219	-72	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGTTTACTTAT	22	False	NA	84	True	AATAAA	-15	NA	29499462	29584157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.10	chr19	+	5342	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	53	1795	0	-151	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGTTGTCATAGAGGA	294	False	NA	NA	False	AATAAA	-27	NA	29499734	29582434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.11	chr19	+	5608	17	ISM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	55	15553	2	-8621	5prime_fragment	FALSE	canonical	3	11	junction_12	4.93354271796647	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCTTGTGGATAATATT	296	False	NA	NA	False	NA	NA	NA	29499736	29568676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107
ES.17627.12	chr19	+	6612	27	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	2	-67	intron_retention	FALSE	canonical	0	0	junction_19	6.95345897492581	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTACTTATCTCAG	296	False	NA	89	True	AATAAA	-20	NA	29499736	29584162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29572800_29573255_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.13	chr19	+	6803	26	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	8	-324	intron_retention	FALSE	canonical	1	2	junction_3	6.8452611345368	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTATTTTGCTGCA	302	False	NA	NA	False	AATAAA	-31	NA	29499742	29583905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539386_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.15	chr19	+	5640	27	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-21	3	intron_retention	FALSE	canonical	0	0	junction_5	7.86695959405143	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTGGGATCCTGTAT	320	False	NA	NA	False	AATAAA	-19	NA	29499760	29582588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29539833_29540004_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.16	chr19	+	4688	26	NIC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-21	-255	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	8.19756061276768	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTTTAATGCGTGTAT	320	False	NA	NA	False	AATATA	-16	NA	29499760	29582330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260_29581633_29582045
ES.17627.17	chr19	+	6995	25	NIC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-16	-72	intron_retention	FALSE	canonical	0	0	junction_12	6.8450103481782	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGTTTACTTAT	325	False	NA	84	True	AATAAA	-15	NA	29499765	29584157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.18	chr19	+	4906	24	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	8031	-151	intron_retention	FALSE	canonical	0	0	junction_5	7.18825969931011	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGTTGTCATAGAGGA	NA	False	NA	NA	False	AATAAA	-27	NA	29518666	29582434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548130_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.19	chr19	+	5009	21	ISM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	45206	1354	-28040	290	3prime_fragment	FALSE	canonical	3	11	junction_7	5.89830484122345	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTATTTGATGTGGACC	7722	False	NA	NA	False	TATAAA	-23	NA	29544887	29582875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.2	chr19	+	5676	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	-46	1560	-46	84	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAGATGTGACTTAAA	195	False	NA	NA	False	TATAAA	-20	NA	29499635	29582669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.20	chr19	+	5650	20	NIC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-24784	-76	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	7.78200210657281	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAACTTTTGTTTAC	NA	False	NA	80	True	AATAAA	-11	NA	29548143	29584153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260_29581633_29582045
ES.17627.21	chr19	+	7325	18	NIC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-24779	-72	intron_retention	FALSE	canonical	3	11	junction_5	5.66968506353952	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGTTTACTTAT	NA	False	NA	84	True	AATAAA	-15	NA	29548148	29584157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29579851_29579991_29580181_29581260
ES.17627.22	chr19	+	7189	11	NNC	ENSMUSG00000038658.16	novel	3994	24	NA	NA	-11527	-136	intron_retention	FALSE	canonical	0	0	junction_7	10.4517941043631	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTATTGGTACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	29561400	29583160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577314_29578217_29578410_29579672_29579851_29579991_29581633_29582045
ES.17627.23	chr19	+	3544	5	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-11062	-8607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.95929214352105	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGTCGCTTTAGACA	NA	False	NA	NA	False	NA	NA	NA	29561865	29568690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29561978_29563180_29563271_29563939_29564101_29565107_29565890_29566291
ES.17627.24	chr19	+	3786	4	NNC	ENSMUSG00000038658.16	novel	3994	24	NA	NA	-10140	-8646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.4406682011537	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAATAAAATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29562787	29568651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29563271_29563939_29564101_29565107_29565890_29566291
ES.17627.25	chr19	+	3486	8	ISM	ENSMUSG00000038658.16	ENSMUST00000162492.8	3994	24	62443	-1683	151	-13	3prime_fragment	FALSE	canonical	3	22	junction_4	4.65547735337152	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATGAATAAATAAA	NA	False	NA	NA	False	AATAGA	-37	NA	29573078	29583283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.3	chr19	+	5345	19	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-44	-8646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	9.1469484893415	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAATAAAATAAAAAGA	197	False	NA	NA	False	NA	NA	NA	29499637	29568651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29512573_29512639_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565890_29566291
ES.17627.4	chr19	+	5299	18	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-26	-8609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	6.99629165242653	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATTGGTCGCTTTAGA	215	False	NA	NA	False	NA	NA	NA	29499655	29568688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565890_29566291
ES.17627.5	chr19	+	6701	28	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	26	-72	intron_retention	FALSE	canonical	0	0	junction_20	8.80671897131846	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGTTTACTTAT	267	False	NA	84	True	AATAAA	-15	NA	29499707	29584157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29512573_29512639_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29572800_29573255_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.6	chr19	+	4951	27	NIC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	-22	-151	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	6.95345897492581	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGTTGTCATAGAGGA	272	False	NA	NA	False	AATAAA	-27	NA	29499712	29582434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260_29581633_29582045
ES.17627.8	chr19	+	6077	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	44	1069	-9	-136	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTATTGGTACCTG	285	False	NA	NA	False	AATAAA	-16	NA	29499725	29583160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17627.9	chr19	+	7059	26	NNC	ENSMUSG00000038658.16	novel	7190	26	NA	NA	0	-72	intron_retention	FALSE	canonical	0	0	junction_9	6.9941689999599	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTTTGTTTACTTAT	294	False	NA	84	True	AATAAA	-15	NA	29499734	29584157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553259_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ES.17628.1	chr19	+	169	1	Intergenic	novelGene_14624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	29624616	29624785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29624600_29624800
ES.17629.1	chr19	-	2896	1	NIC	ENSMUSG00000097855.9	novel	1145	4	NA	NA	-203	-15639	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTCCACTTGACCTGC	775	False	NA	NA	False	TATAAA	-22	NA	29499597	29496701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29496700_29499600
ES.1763.1	chr1	+	1912	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	-5	2	-5	-2	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGGTGTCATCTTGT	NA	False	NA	18	True	AATAAA	-18	NA	164103148	164115414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ES.1763.3	chr1	+	2524	4	ISM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	30	4169	30	-4169	5prime_fragment	FALSE	canonical	2	28	junction_1	11.4406682011537	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAAGACTCTGTAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	164103183	164111247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959
ES.17630.1	chr19	-	381	1	Intergenic	novelGene_14622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	29503212	29502831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29502800_29503200
ES.17630.2	chr19	-	172	1	Intergenic	novelGene_14623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29503211	29503039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29503000_29503200
ES.17631.1	chr19	-	4774	1	Genic_Genomic	ENSMUSG00000046324.13	novel	NA	NA	NA	NA	1270	2022	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGGGGTGGGGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	29588365	29583591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_29583600_29588400
ES.17631.10	chr19	-	5440	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-6	322	intron_retention	FALSE	canonical	0	0	junction_13	118.636625410911	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGATCCGGAGTATAT	NA	False	NA	-4	True	AATAAA	-19	NA	29625796	29587279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29615349_29615417_29617256_29617385_29623366_29623669_29625435
ES.17631.11	chr19	-	5342	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	8	319	intron_retention	FALSE	canonical	0	0	junction_2	90.9394281477332	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGAAGATCCGGAGTA	NA	False	NA	-7	True	AATAAA	-16	NA	29625807	29587282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590294_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.12	chr19	-	5307	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-16668	18	intron_retention	FALSE	canonical	1	1	junction_15	89.23636528282	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTACAACTGCTTTTTA	5907	False	NA	1	True	AATAAA	-31	NA	29642483	29587583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435_29625954_29642402
ES.17631.18	chr19	-	7581	14	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	4	14	intron_retention	FALSE	canonical	3	290	junction_6	31.6360591206678	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	-3	True	AATAAA	-27	NA	29625786	29587587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.19	chr19	-	4577	12	NIC	ENSMUSG00000046324.13	novel	4714	14	NA	NA	-48	14	intron_retention	FALSE	canonical	0	0	junction_10	130.905997438197	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	-3	True	AATAAA	-27	NA	29625635	29587587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29609790_29609938_29623366_29623669_29625435
ES.17631.20	chr19	-	4969	14	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	0	14	intron_retention	FALSE	non_canonical	0	0	junction_9	94.1613873299737	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	-3	True	AATAAA	-27	NA	29625815	29587587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606202_29609797_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.22	chr19	-	4802	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	7	14	intron_retention	FALSE	non_canonical	0	0	junction_15	89.4715348899054	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	-3	True	AATAAA	-27	NA	29625771	29587587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435_29625507_29625744
ES.17631.23	chr19	-	4442	12	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	4	14	intron_retention	FALSE	non_canonical	0	0	junction_1	98.5441965703001	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTTACAACTGCTT	NA	False	NA	-3	True	AATAAA	-27	NA	29625786	29587587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590046_29595313_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.25	chr19	-	5103	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	5	8	intron_retention	FALSE	canonical	0	0	junction_13	118.636625410911	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGATCTTTTACAA	NA	False	NA	-9	True	AATAAA	-21	NA	29625773	29587593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29615349_29615417_29617256_29617385_29623366_29623669_29625435
ES.17631.26	chr19	-	3806	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4715348899054	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGATCTTTTACAA	NA	False	NA	-9	True	AATAAA	-21	NA	29625792	29587593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29588700_29589948_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.27	chr19	-	5161	14	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	6	8	intron_retention	FALSE	canonical	3	290	junction_5	28.0095081066894	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGATCTTTTACAA	NA	False	NA	-9	True	AATAAA	-21	NA	29625809	29587593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.3	chr19	-	7041	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	17	0	-8	0	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTAAATGTTTAAGCT	NA	False	NA	NA	False	NA	NA	NA	29625798	29585613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.30	chr19	-	4271	17	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	11	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.862278038277	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATGGATCTTTTACA	NA	False	NA	-10	True	AATAAA	-20	NA	29625767	29587594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29588700_29589569_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29594370_29594483_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.34	chr19	-	5169	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_12	134.347741162833	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625793	29587601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590083_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29613314_29613433_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.36	chr19	-	5063	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_13	115.510954511877	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625802	29587601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590083_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617378_29623356_29623669_29625435
ES.17631.37	chr19	-	4970	14	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	7	0	intron_retention	FALSE	canonical	1	9	junction_9	91.8950391743323	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625808	29587601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.38	chr19	-	4714	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	89.4715348899054	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29625786	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29587784_29588109_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.39	chr19	-	4980	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	89.4715348899054	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29625797	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29589681_29589751_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.4	chr19	-	5978	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	42	1038	5	950	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGCCTCAGTAAATTGA	NA	False	NA	NA	False	AATAAA	-12	NA	29625773	29586651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.40	chr19	-	4199	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.519449973909	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29625797	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29588700_29589547_29590080_29590172_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.41	chr19	-	5012	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_2	90.9394281477332	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29625797	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590294_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.42	chr19	-	5048	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	136.936600852589	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29625797	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590083_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606211_29608738_29608836_29609790_29609938_29614690_29614793_29617256_29617385_29623366_29623669_29625435
ES.17631.43	chr19	-	5407	13	NNC	ENSMUSG00000046324.13	novel	4714	14	NA	NA	466	-1	intron_retention	FALSE	canonical	2	3	junction_12	97.6911232178009	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGTTGGAAAAAATGGAT	NA	False	NA	-18	True	AATAAA	-12	NA	29616497	29587602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29615349
ES.17631.44	chr19	-	4769	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-16669	-3	intron_retention	FALSE	canonical	1	4	junction_14	91.5307743497302	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGGTTGGAAAAAATGG	5906	False	NA	-20	True	AATAAA	-10	NA	29642484	29587604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29642402
ES.17631.45	chr19	-	4369	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	17	2672	-8	-684	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTCTGTGCCCGGGTT	NA	False	NA	NA	False	AATGAA	-16	NA	29625798	29588285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.46	chr19	-	4220	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	18	2820	-7	-832	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCACTAGTGCTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	29625797	29588433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.47	chr19	-	3429	14	ISM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	2413	2983	25	-995	3prime_fragment	FALSE	canonical	3	290	junction_6	31.9528128420756	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGTGGTACGTGTCAGT	NA	False	NA	NA	False	NA	NA	NA	29623402	29588596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366
ES.17631.48	chr19	-	3524	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	23	3511	-2	682	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTCTTTATTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	29625792	29589124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.49	chr19	-	3199	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	7	3852	7	341	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTCGAGCGCTGTTTC	NA	False	NA	NA	False	AGTAAA	-33	NA	29625808	29589465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.5	chr19	-	5410	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	-12	1660	-12	328	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGGAGTATATTTAGGT	NA	False	NA	2	True	AATAAA	-25	NA	29625827	29587273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.50	chr19	-	3049	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	19	3990	-6	203	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGGCTCTTAGACCAC	NA	False	NA	NA	False	AAGAAA	-1	NA	29625796	29589603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.51	chr19	-	2896	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	-5	4167	-5	26	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCAGGGCTAAGTACTG	NA	False	NA	27	True	AATGAA	-40	NA	29625820	29589780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.52	chr19	-	2801	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.602838586545	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGCATATGTTCAAAGA	NA	False	NA	-8	True	AATACA	-15	NA	29625770	29589815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604256_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.55	chr19	-	5627	14	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	290	junction_5	29.7721127605155	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGCATATGTTCAAAG	NA	False	NA	-9	True	AATACA	-14	NA	29625797	29589816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590080_29590168_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.56	chr19	-	2944	16	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.078386881173	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGCATATGTTCAAAG	NA	False	NA	-9	True	AATACA	-14	NA	29625786	29589816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29613314_29613433_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.57	chr19	-	4392	14	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	290	junction_6	31.790549747597	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGCATATGTTCAAAG	NA	False	NA	-9	True	AATACA	-14	NA	29625816	29589816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ES.17631.58	chr19	-	2722	3	ISM	ENSMUSG00000046324.13	ENSMUST00000159243.2	1950	7	-3	9925	-3	6787	5prime_fragment	FALSE	canonical	3	332	junction_2	19	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	29625793	29615322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29617385_29623366_29623669_29625435
ES.17631.59	chr19	-	4003	1	NIC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	-8	314	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGACATTTTACAATG	NA	False	NA	NA	False	NA	NA	NA	29625798	29621795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29621800_29625800
ES.17631.6	chr19	-	4897	14	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	5	326	intron_retention	TRUE	non_canonical	0	0	junction_1	122.226436482244	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCGGAGTATATTTAG	NA	False	NA	0	True	AATAAA	-23	NA	29625773	29587275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590172_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617305_29625506
ES.17631.7	chr19	-	4576	12	NNC	ENSMUSG00000046324.13	novel	4714	14	NA	NA	-7	326	intron_retention	FALSE	non_canonical	0	0	junction_11	102.854948815639	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCGGAGTATATTTAG	NA	False	NA	0	True	AATAAA	-23	NA	29625797	29587275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609864_29625627
ES.17632.1	chr19	+	169	1	Intergenic	novelGene_14625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTGCAAAGCACATT	NA	False	NA	NA	False	NA	NA	NA	29651264	29651433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29651300_29651400
ES.17633.1	chr19	-	206	1	Intergenic	novelGene_14626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTGGACCAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	29655121	29654915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29654900_29655100
ES.17634.1	chr19	+	433	3	ISM	ENSMUSG00000024806.5	ENSMUST00000235954.2	739	5	6739	-22	6739	22	3prime_fragment	FALSE	canonical	3	41	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTGGGCAGTAATGC	NA	False	NA	26	True	AATAAA	-17	NA	29682072	29685848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_29682117_29684207_29684322_29685573
ES.17635.1	chr19	+	2564	1	Antisense	novelGene_ENSMUSG00000046138.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGTCTTGTGTTTAA	714	False	NA	NA	False	ACTAAA	-4	NA	29698630	29701194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_29698600_29701200
ES.17636.1	chr19	-	8561	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1037	0	-555	0	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCATGATTTCATTACTT	3365	False	NA	0	True	AATAAA	-23	NA	29783944	29691801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.10	chr19	-	8641	4	ISM	ENSMUSG00000046138.16	ENSMUST00000177155.8	6632	7	66830	-261	4453	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	2.05480466765633	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTGTTTGAATACCA	NA	False	NA	-1	True	AATAAA	-13	NA	29716559	29692713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515
ES.17636.11	chr19	-	6725	8	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.17662172643096	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTGTTTGAATACCA	3890	False	NA	-1	True	AATAAA	-13	NA	29783419	29692713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29696608_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.12	chr19	-	7186	8	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-399	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.49969987465344	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTTGTTTGAATACC	3521	False	NA	-2	True	AATAAA	-12	NA	29783788	29692714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732112_29763648_29763850_29782681
ES.17636.13	chr19	-	7657	8	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-547	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.49969987465344	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTTGTTTGAATACC	3373	False	NA	-2	True	AATAAA	-12	NA	29783936	29692714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732435_29763648_29763850_29782681
ES.17636.14	chr19	-	6741	3	ISM	ENSMUSG00000046138.16	ENSMUST00000175764.9	4678	4	17838	126	17838	-126	3prime_fragment	FALSE	canonical	3	21	junction_1	2.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTGTCTTATTTATGT	NA	False	NA	NA	False	AATATA	-12	NA	29703174	29692838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29697007_29697985_29698174_29700789
ES.17636.15	chr19	-	3380	7	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-555	-7479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.51168871558685	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTCTTTTGGTTATT	3365	False	NA	NA	False	AATAAA	-23	NA	29783944	29705600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29705801_29707231_29707360_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.16	chr19	-	3187	5	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-556	-12214	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.98262211161084	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTATTTTTATCATT	3364	False	NA	NA	False	AGTAAA	-16	NA	29783945	29710335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29710671_29712515_29712606_29720932_29721013_29730999_29732418_29782681
ES.17636.17	chr19	-	2744	3	ISM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1038	39337	-556	-33017	5prime_fragment	FALSE	canonical	3	16	junction_1	4	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGATGTTTTGAATGA	3364	False	NA	NA	False	ACTAAA	-37	NA	29783945	29731138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29732418_29763648_29763850_29782681
ES.17636.18	chr19	-	2677	5	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-311	-33017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.9498743710662	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGATGTTTTGAATGA	3609	False	NA	NA	False	ACTAAA	-37	NA	29783700	29731138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29732418_29758457_29758553_29759479_29759563_29763648_29763850_29782681
ES.17636.19	chr19	-	2818	4	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-535	-33017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.4986771653491	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGATGTTTTGAATGA	3385	False	NA	NA	False	ACTAAA	-37	NA	29783924	29731138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29732418_29758457_29758553_29763648_29763850_29782681
ES.17636.2	chr19	-	8394	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1029	159	-547	-159	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTTTGGTCAGTGCT	3373	False	NA	NA	False	ATTAAA	-17	NA	29783936	29691960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.20	chr19	-	2535	2	ISM	ENSMUSG00000046138.16	ENSMUST00000177155.8	6632	7	-548	38164	-548	-33017	5prime_fragment	FALSE	canonical	1	2	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGATGTTTTGAATGA	3372	False	NA	NA	False	ACTAAA	-37	NA	29783937	29731138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_29732418_29782681
ES.17636.21	chr19	-	2826	4	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-546	-33021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.11805216802087	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAAGATGTTTTGA	3374	False	NA	NA	False	ACTAAA	-33	NA	29783935	29731142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29732418_29763648_29763850_29768748_29768845_29782681
ES.17636.3	chr19	-	7589	7	NIC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-546	64	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.19383236885457	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTAGTCCTTTAAAAC	3374	False	NA	64	True	TATAAA	-1	NA	29783935	29692648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29697007_29697985_29698174_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.4	chr19	-	7681	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-1051	894	-569	17	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTAAAATGTGTTCTT	3351	False	NA	17	True	AATAAA	-31	NA	29783958	29692695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ES.17636.5	chr19	-	7708	8	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-567	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.32993127835043	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3353	False	NA	0	True	AATAAA	-14	NA	29783956	29692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721059_29730999_29732418_29763648_29763850_29782681
ES.17636.6	chr19	-	7433	7	FSM	ENSMUSG00000046138.16	ENSMUST00000177155.8	6632	7	-539	-262	-539	0	multi-exon	FALSE	canonical	1	2	junction_6	8.20568908339411	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3381	False	NA	0	True	AATAAA	-14	NA	29783928	29692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29782681
ES.17636.7	chr19	-	6111	6	NIC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-550	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.90757286120067	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3370	False	NA	0	True	AATAAA	-14	NA	29783939	29692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_29697007_29697985_29698174_29712515_29712606_29720932_29721013_29763648_29763850_29782681
ES.17636.8	chr19	-	7727	9	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	-536	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.23309265630969	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3384	False	NA	0	True	AATAAA	-14	NA	29783925	29692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29768748_29768845_29782681
ES.17636.9	chr19	-	6997	9	NNC	ENSMUSG00000046138.16	novel	7524	8	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.29717699089353	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	4113	False	NA	0	True	AATAAA	-14	NA	29783196	29692712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29758457_29758553_29763648_29763850_29782681
ES.17637.1	chr19	-	4871	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	-2	-294	-2	294	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGATTTTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	29790376	29785505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29785500_29790400
ES.17637.2	chr19	-	4625	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	-50	0	-50	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790424	29785799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_29785800_29790400
ES.17637.3	chr19	-	2881	3	NNC	ENSMUSG00000074909.6	novel	917	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790365	29785799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_29788397_29788966_29789100_29790214
ES.17638.1	chr19	+	447	1	Intergenic	novelGene_14627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACTCAATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	29790438	29790885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29790400_29790900
ES.17639.1	chr19	-	176	1	Intergenic	novelGene_14628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAGAA	675	False	NA	NA	False	NA	NA	NA	29812311	29812135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29812100_29812300
ES.1764.1	chr1	-	3812	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	206	-1588	-11	-1	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTTAGTTCTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	164134852	164117369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.10	chr1	-	2470	8	NIC	ENSMUSG00000026577.14	novel	3948	9	NA	NA	36	216	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	77.1767121478959	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTGCCCTTTCCTTT	NA	False	NA	-21	True	AATAAA	-16	NA	164134805	164118741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131416_164131494_164134007_164134086_164134715
ES.1764.11	chr1	-	2444	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	-27	-815	-27	74	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGAGCAGTGCCTATCA	NA	False	NA	69	True	AATATA	-17	NA	164135085	164118883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ES.1764.12	chr1	-	6060	7	NIC	ENSMUSG00000026577.14	novel	1602	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	8	junction_6	65.5983146802484	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGTGCTCATTTGTCTT	NA	False	NA	-2	True	ATTAAA	-19	NA	164135054	164118954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164134086_164134715_164134924_164135010
ES.1764.13	chr1	-	4603	6	NIC	ENSMUSG00000026577.14	novel	3948	9	NA	NA	-6	3	intron_retention	FALSE	canonical	3	18	junction_4	62.4198686317105	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGTGCTCATTTGTCTT	NA	False	NA	-2	True	ATTAAA	-19	NA	164134847	164118954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164127314_164129852_164131494_164134007_164134086_164134715
ES.1764.14	chr1	-	3615	6	NIC	ENSMUSG00000026577.14	novel	2430	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	158	junction_1	10.0995049383621	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGGTGCTCATTTGTC	NA	False	NA	-4	True	ATTAAA	-17	NA	164135065	164118956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.15	chr1	-	2458	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	-28	0	-28	0	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAAGGTGCTCATTTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	164135086	164118957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.16	chr1	-	2502	8	NIC	ENSMUSG00000026577.14	novel	3948	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	5	junction_5	77.1767121478959	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAAGGTGCTCATTTG	NA	False	NA	-6	True	ATTAAA	-15	NA	164135054	164118958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131416_164131494_164134007_164134086_164134715
ES.1764.17	chr1	-	1592	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4	6	-1	-6	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATAATACATACCCATG	NA	False	NA	-30	True	AATAAA	-13	NA	164135054	164119704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ES.1764.18	chr1	-	762	2	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	11177	123	10960	-123	3prime_fragment	FALSE	canonical	3	158	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGGGAGCTCATTGC	NA	False	NA	NA	False	AATATA	-22	NA	164123881	164119821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164119981_164123278
ES.1764.19	chr1	-	6480	1	NIC	ENSMUSG00000026577.14	novel	3948	9	NA	NA	3982	2731	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCTCCGGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	164130859	164124379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164124400_164130900
ES.1764.2	chr1	-	4971	6	NIC	ENSMUSG00000026577.14	novel	2430	7	NA	NA	7	-1	intron_retention	FALSE	canonical	3	158	junction_1	10.0995049383621	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTTAGTTCTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	164134834	164117369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.20	chr1	-	3788	4	NIC	ENSMUSG00000026577.14	novel	921	5	NA	NA	-1	2731	intron_retention	FALSE	canonical	3	169	junction_1	6.79869268479038	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCTCCGGTTACTTA	NA	False	NA	NA	False	NA	NA	NA	164135054	164124379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.21	chr1	-	3549	4	NNC	ENSMUSG00000026577.14	novel	921	5	NA	NA	10	2730	intron_retention	FALSE	canonical	0	0	junction_3	83.6938866743962	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTGCTCCGGTTACTT	NA	False	NA	NA	False	NA	NA	NA	164134831	164124380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164127314_164129852_164130290_164134007_164134086_164134730
ES.1764.22	chr1	-	3802	5	FSM	ENSMUSG00000026577.14	ENSMUST00000124007.2	921	5	-181	-2700	18	2700	multi-exon	FALSE	canonical	3	5	junction_2	81.9889474258573	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164135022	164124410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164127314_164129852_164130290_164131416_164131494_164134007_164134086_164134715
ES.1764.23	chr1	-	7487	3	NIC	ENSMUSG00000026577.14	novel	921	5	NA	NA	-12	2696	intron_retention	FALSE	canonical	3	169	junction_1	6	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164135070	164124414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164127314_164129852_164134086_164134715
ES.1764.24	chr1	-	2361	5	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	219	4716	2	2696	internal_fragment	FALSE	canonical	3	169	junction_2	13.7386316640341	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164134839	164124414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.3	chr1	-	3561	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4	-1963	-1	-367	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACATTCAACCTCTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	164135054	164117735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ES.1764.4	chr1	-	2683	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	0	-253	0	253	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTTCAGGTGGCT	NA	False	NA	16	True	NA	NA	NA	164135058	164118704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.5	chr1	-	3605	6	NIC	ENSMUSG00000026577.14	novel	2430	7	NA	NA	7	222	intron_retention	FALSE	canonical	3	158	junction_1	10.0995049383621	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTTTCCTTTCAGAAG	NA	False	NA	-15	True	AATAAA	-22	NA	164134834	164118735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164123499_164125807_164127314_164129852_164130290_164134007_164134086_164134715
ES.1764.7	chr1	-	2662	8	ISM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	2	1371	2	218	intron_retention	FALSE	canonical	3	12	junction_5	75.5604907018347	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCCCTTTCCTTTCA	NA	False	NA	-19	True	AATAAA	-18	NA	164135051	164118739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131472_164131494_164134007_164134086_164134715
ES.1764.8	chr1	-	2556	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4	-958	-1	217	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGTGCCCTTTCCTTTC	NA	False	NA	-20	True	AATAAA	-17	NA	164135054	164118740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ES.1764.9	chr1	-	6087	5	NIC	ENSMUSG00000026577.14	novel	2430	7	NA	NA	27	216	intron_retention	FALSE	canonical	3	158	junction_1	10.5918600821574	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTGCCCTTTCCTTT	NA	False	NA	-21	True	AATAAA	-16	NA	164135013	164118741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164119981_164123278_164127314_164129852_164130290_164134007_164134086_164134715
ES.17640.1	chr19	+	180	1	Intergenic	novelGene_14629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29922561	29922741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29922600_29922700
ES.17640.2	chr19	+	336	1	Intergenic	novelGene_14630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAACAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	29922562	29922898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_29922600_29922900
ES.17641.1	chr19	-	176	1	Intergenic	novelGene_14631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	29934197	29934021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_29934000_29934200
ES.17642.1	chr19	+	3368	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-88	4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	68.3643077301933	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	3997	False	NA	29	True	AATAAA	-19	NA	30007824	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.10	chr19	+	7931	13	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-55	4	intron_retention	FALSE	canonical	3	216	junction_4	28.3504850046697	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4030	False	NA	29	True	AATAAA	-19	NA	30007857	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.11	chr19	+	3796	17	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.0608771781976	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGACGCATCCAGCTT	4031	False	NA	24	True	AATAAA	-14	NA	30007858	30071121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30026865_30027073_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.13	chr19	+	3100	14	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-54	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	74.3865642891615	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4031	False	NA	29	True	AATAAA	-19	NA	30007858	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.14	chr19	+	3496	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	68.4939575599353	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4033	False	NA	25	True	AATAAA	-15	NA	30007860	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063717_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.15	chr19	+	5381	1	Genic_Genomic	ENSMUSG00000024817.14	novel	NA	NA	NA	NA	-46	-21316	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAGACAAAAG	4039	False	NA	NA	False	NA	NA	NA	30007866	30013247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_30007900_30013200
ES.17642.16	chr19	+	3230	15	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	89.9390099467638	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4039	False	NA	25	True	AATAAA	-15	NA	30007866	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063717_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.17	chr19	+	4184	4	NNC	ENSMUSG00000024817.14	novel	3231	3	NA	NA	-46	700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.104473525208	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTGCCTATATGTAT	4039	False	NA	NA	False	AATAAA	-19	NA	30007866	30036912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30026865_30027073_30033634
ES.17642.18	chr19	+	3189	15	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-40	-243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.9027868227999	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGTGTAATGTGGTGTT	4045	False	NA	NA	False	NA	NA	NA	30007872	30070879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048836_30052491_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.2	chr19	+	3628	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-88	-4	-88	4	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	3997	False	NA	29	True	AATAAA	-19	NA	30007824	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.20	chr19	+	6390	14	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	98.0984290146786	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGACGCATCCAGCT	4045	False	NA	23	True	AATAAA	-13	NA	30007872	30071120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30063551_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.21	chr19	+	6271	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	216	junction_4	28.5975773199659	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGACGCATCCAGCTT	4046	False	NA	24	True	AATAAA	-14	NA	30007873	30071121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30069540_30070117
ES.17642.23	chr19	+	3344	15	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-35	4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	93.0577229246362	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4050	False	NA	29	True	AATAAA	-19	NA	30007877	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30033634_30033895_30048642_30048862_30051290_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.24	chr19	+	5950	13	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-35	4	intron_retention	FALSE	canonical	0	0	junction_5	97.93205552831	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4050	False	NA	29	True	AATAAA	-19	NA	30007877	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30055538_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.26	chr19	+	3463	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-31	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	73.5958697266112	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4054	False	NA	29	True	AATAAA	-19	NA	30007881	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.27	chr19	+	3476	17	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.8960988794842	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4054	False	NA	29	True	AATAAA	-19	NA	30007881	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048718_30048809_30048862_30051293_30051404_30052483_30052671_30055416_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.28	chr19	+	3560	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-28	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.1029718818444	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4057	False	NA	29	True	AATAAA	-19	NA	30007884	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016690_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.30	chr19	+	3219	15	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.5412483871988	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4092	False	NA	25	True	AATAAA	-15	NA	30007919	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063695_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.31	chr19	+	3521	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.1526589343238	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4094	False	NA	25	True	AATAAA	-15	NA	30007921	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055419_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.32	chr19	+	3728	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.3138291092423	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4098	False	NA	29	True	AATAAA	-19	NA	30007925	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016262_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.33	chr19	+	6416	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	45	-3230	-31	3230	multi-exon	FALSE	canonical	3	253	junction_1	21.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTCATATCTTACAT	4130	False	NA	NA	False	AATAAA	-19	NA	30007957	30039442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634
ES.17642.35	chr19	+	3275	17	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	69.0697111619847	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGACGCATCCAGCTT	4209	False	NA	24	True	AATAAA	-14	NA	30008036	30071121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117_30070210_30070345
ES.17642.36	chr19	+	3335	16	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	87	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	71.3138291092423	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	4248	False	NA	29	True	AATAAA	-19	NA	30008075	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30008290_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.38	chr19	+	2885	14	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	25720	0	-17550	0	3prime_fragment	FALSE	canonical	3	216	junction_2	28.1256689598287	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	2965	False	NA	25	True	AATAAA	-15	NA	30033632	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.39	chr19	+	1778	1	Intergenic	novelGene_14633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCCTACAGATGAATG	6917	False	NA	5	True	ATTAAA	-16	NA	30042434	30044212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30042400_30044200
ES.17642.4	chr19	+	3191	16	NNC	ENSMUSG00000024817.14	novel	1392	3	NA	NA	-87	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	71.0838628350736	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	3998	False	NA	29	True	AATAAA	-19	NA	30007825	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30007896_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.40	chr19	+	4474	1	NIC	ENSMUSG00000024817.14	novel	3342	9	NA	NA	-6622	-3887	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTTGCAGCATAGGCA	1787	False	NA	NA	False	NA	NA	NA	30044560	30049034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30044600_30049000
ES.17642.41	chr19	+	2625	13	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	40728	0	-2542	0	3prime_fragment	FALSE	canonical	3	216	junction_1	27.5271330791195	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	5867	False	NA	25	True	AATAAA	-15	NA	30048640	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.42	chr19	+	2426	12	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-2503	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.800295270565	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	5906	False	NA	25	True	AATAAA	-15	NA	30048679	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30048862_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063695_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.43	chr19	+	3621	6	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	53779	-4	-1402	4	3prime_fragment	FALSE	canonical	3	255	junction_4	18.3847763108502	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	1309	False	NA	29	True	AATAAA	-19	NA	30061691	30071126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.44	chr19	+	2669	1	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-909	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGACGCATCCAGCT	8069	False	NA	23	True	AATAAA	-13	NA	30068451	30071120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_30068500_30071100
ES.17642.5	chr19	+	4010	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	-83	-696	-83	696	multi-exon	FALSE	canonical	3	253	junction_1	21.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTTTTGCCTATAT	4002	False	NA	NA	False	AATAAA	-15	NA	30007829	30036908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634
ES.17642.6	chr19	+	3298	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	-66	-1	-66	1	multi-exon	FALSE	canonical	3	253	junction_1	21.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAACAGA	4019	False	NA	NA	False	AATAAA	-16	NA	30007846	30036213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634
ES.17642.7	chr19	+	4174	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-66	-572	-66	572	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGTATGAATATTGAA	4019	False	NA	NA	False	NA	NA	NA	30007846	30071694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.8	chr19	+	3550	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	71.0590990342233	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4021	False	NA	25	True	AATAAA	-15	NA	30007848	30071122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063695_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17642.9	chr19	+	3354	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	-60	242	-60	-242	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTGTAATGTGGTGTTT	4025	False	NA	NA	False	NA	NA	NA	30007852	30070880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ES.17643.1	chr19	-	10628	1	Intergenic	novelGene_14632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACCTGAAGGTGGG	2372	False	NA	NA	False	NA	NA	NA	30027959	30017331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30017300_30028000
ES.17644.1	chr19	+	168	1	Intergenic	novelGene_14634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATTATCCA	NA	False	NA	NA	False	NA	NA	NA	30074089	30074257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30074100_30074300
ES.17645.1	chr19	+	4559	3	Antisense	novelGene_ENSMUSG00000024827.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCAAT	NA	False	NA	NA	False	TTTAAA	-26	NA	30120986	30125872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_30122744_30123017_30125659_30125711
ES.17646.1	chr19	+	154	1	Intergenic	novelGene_14636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	30137011	30137165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30137000_30137200
ES.17647.1	chr19	+	4454	1	Intergenic	novelGene_14637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAACAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30146533	30150987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30146500_30151000
ES.17648.1	chr19	-	3867	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	-94	-6	-94	6	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCATTTGATTTTACAC	NA	False	NA	-1	True	AATAAA	-22	NA	30152923	30075840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.14	chr19	-	3815	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	301.596999321943	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152871	30075846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111088_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.15	chr19	-	3650	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	307.535197856448	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152825	30075846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.17	chr19	-	3778	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	301.934454692663	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152828	30075846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114480_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.19	chr19	-	3587	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	302.26165713666	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152826	30075846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151869_30152533
ES.17648.22	chr19	-	3928	26	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	427.145884212876	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152823	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093355_30093521_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123013_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.24	chr19	-	4860	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	3	-2	intron_retention	FALSE	canonical	1	455	junction_4	187.372035728806	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152826	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.26	chr19	-	3808	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	302.165230277888	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152880	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122554_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.28	chr19	-	3756	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	296.148611342346	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152829	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091130_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.29	chr19	-	3876	24	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	5	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	362.222456165369	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152824	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088073_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30111180_30111589_30111688_30113903_30113985_30114492_30114577_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.30	chr19	-	3102	20	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	330.701705058398	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152844	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30122702_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.31	chr19	-	3787	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	302.215695139893	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152826	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123191_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.32	chr19	-	3759	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	301.401310547914	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152825	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111189_30111600_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.34	chr19	-	4022	24	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	21	-2	intron_retention	FALSE	canonical	0	0	junction_9	306.692015609411	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152808	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102117_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.4	chr19	-	3644	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	308.510679425317	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCATTTGATTTTACA	NA	False	NA	-2	True	AATAAA	-21	NA	30152827	30075841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.40	chr19	-	2039	14	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	10971	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	388.836254914707	1272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	3697	False	NA	-9	True	AATAAA	-14	NA	30111660	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093831_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589
ES.17648.41	chr19	-	3620	24	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	380.592056931857	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152828	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30120759_30120857_30122584_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.43	chr19	-	3573	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	302.26165713666	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152808	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151869_30152527
ES.17648.46	chr19	-	3772	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	301.689130724364	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152874	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122584_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.47	chr19	-	3747	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	301.448560081152	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGAATTTCCCATTTGA	NA	False	NA	-9	True	AATAAA	-14	NA	30152826	30075848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091249_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.51	chr19	-	3815	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	301.108919823412	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152853	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078115_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.54	chr19	-	5788	23	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	149	-3	intron_retention	FALSE	canonical	1	455	junction_4	188.367327315541	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152680	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30110922_30111094_30111180_30111589_30111688_30113903_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.57	chr19	-	3469	26	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	296.177827664395	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152829	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390_30152432_30152726
ES.17648.6	chr19	-	3765	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	296.851320693074	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCCCATTTGATTTTA	NA	False	NA	-4	True	AATAAA	-19	NA	30152848	30075843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116753_30120755_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.62	chr19	-	3778	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	302.157838513251	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152846	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111681_30113899_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.63	chr19	-	3665	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	270.354650507513	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152826	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.65	chr19	-	3784	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	301.108919823412	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGAATTTCCCATTTG	NA	False	NA	-10	True	AATAAA	-13	NA	30152829	30075849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078122_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.66	chr19	-	3777	25	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	302.074882065689	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCGAATTTCCCATTT	NA	False	NA	-11	True	AATAAA	-12	NA	30152828	30075850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110937_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.67	chr19	-	3657	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-67	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	306.872990235547	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCGAATTTCCCATTT	NA	False	NA	-11	True	AATAAA	-12	NA	30152896	30075850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.68	chr19	-	3786	24	NNC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	386.55146850993	1281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCGAATTTCCCATTT	NA	False	NA	-11	True	AATAAA	-12	NA	30152847	30075850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30076511_30077236_30077318_30078146_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109260_30111088_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.7	chr19	-	3737	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	-45	3	combination_of_known_splicesites	FALSE	canonical	1	6	junction_20	307.561640278642	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCCCATTTGATTTTA	NA	False	NA	-4	True	AATAAA	-19	NA	30152874	30075843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.70	chr19	-	3657	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	3	107	3	-107	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAATGTGCCTGATCTG	NA	False	NA	-65	True	NA	NA	NA	30152826	30075953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.71	chr19	-	1186	1	Intergenic	novelGene_14635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30089585	30088399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30088400_30089600
ES.17648.72	chr19	-	3299	21	NNC	ENSMUSG00000024827.11	novel	2866	19	NA	NA	-41	2897	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	276.721050879762	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCTTGGAGCCACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	30152870	30089323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30089941_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.73	chr19	-	3078	21	NNC	ENSMUSG00000024827.11	novel	2866	19	NA	NA	-45	2672	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	276.721050879762	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTAAGTAAGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	30152874	30089548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_30089941_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ES.17648.74	chr19	-	3216	3	ISM	ENSMUSG00000024827.11	ENSMUST00000235189.2	2866	19	9	41122	9	-14540	5prime_fragment	FALSE	canonical	3	1135	junction_2	91.5	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGTGGTGGTTACATT	NA	False	NA	NA	False	AATAAA	-14	NA	30152820	30133342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_30136050_30151823_30151903_30152390
ES.17648.75	chr19	-	2673	1	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	4	-31350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGGTCTCACTATGTG	NA	False	NA	NA	False	NA	NA	NA	30152825	30150152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_30150200_30152800
ES.17648.76	chr19	-	2230	2	ISM	ENSMUSG00000024827.11	ENSMUST00000235189.2	2866	19	-41	57932	-41	-31350	5prime_fragment	FALSE	canonical	3	1135	junction_1	0	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGGGTCTCACTATGTG	NA	False	NA	NA	False	NA	NA	NA	30152870	30150152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_30151903_30152390
ES.17649.1	chr19	+	179	1	Intergenic	novelGene_14638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	30155998	30156177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30156000_30156200
ES.1765.1	chr1	+	1742	14	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	27.275061761302	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164135229	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ES.1765.10	chr1	+	3106	6	NNC	ENSMUSG00000026575.16	novel	2536	16	NA	NA	2431	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.5133612520084	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	9815	False	NA	NA	False	AATAAA	-14	NA	164203268	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164205752_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ES.1765.11	chr1	+	177	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGAGG	8706	False	NA	NA	False	NA	NA	NA	164258006	164258183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164258000_164258200
ES.1765.12	chr1	+	5131	1	NIC	ENSMUSG00000026575.16	novel	2536	16	NA	NA	58895	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164259732	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164259700_164264900
ES.1765.2	chr1	+	788	5	ISM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	-2	104371	-2	-1308	5prime_fragment	FALSE	canonical	3	68	junction_2	26.0959767013998	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGGGATTGGTTCCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	164135238	164160498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180
ES.1765.3	chr1	+	2379	10	NIC	ENSMUSG00000026575.16	novel	1740	14	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	44.9183071919196	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGTGCTCTTCTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	164135245	164177003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_164135324_164135628_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164175727
ES.1765.5	chr1	+	1652	13	ISM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	387	6	-14	0	3prime_fragment	FALSE	canonical	3	68	junction_1	20.4443689612133	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164135627	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ES.1765.6	chr1	+	1346	10	NNC	ENSMUSG00000026575.16	novel	597	4	NA	NA	8502	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	52.0960651105244	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164148949	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164149056_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164213268_164213371_164230538_164230647_164264584
ES.1765.7	chr1	+	1421	12	NNC	ENSMUSG00000026575.16	novel	597	4	NA	NA	8561	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	36.9940803841787	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164149008	164264863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164149056_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ES.1765.8	chr1	+	174	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCTTTAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	164173864	164174038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164173900_164174000
ES.1765.9	chr1	+	2027	1	Genic_Genomic	ENSMUSG00000026575.16	novel	NA	NA	NA	NA	-32	-5595	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAGAAAAGGCTAATGT	7352	False	NA	NA	False	NA	NA	NA	164200805	164202832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_164200800_164202800
ES.17650.1	chr19	+	169	1	Intergenic	novelGene_14639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAGTAAATTAG	NA	False	NA	NA	False	NA	NA	NA	30156764	30156933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30156800_30156900
ES.17651.1	chr19	-	319	1	Intergenic	novelGene_14640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30161814	30161495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30161500_30161800
ES.17652.1	chr19	+	2958	1	Intergenic	novelGene_14641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	30163251	30166209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30163300_30166200
ES.17652.2	chr19	+	6838	1	Intergenic	novelGene_14642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGACTCTTCCTGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	30163276	30170114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30163300_30170100
ES.17653.1	chr19	+	141	1	Intergenic	novelGene_14643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30181653	30181794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30181700_30181800
ES.17654.1	chr19	-	170	1	Intergenic	novelGene_14644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30186575	30186405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30186400_30186600
ES.17655.1	chr19	+	726	3	NNC	ENSMUSG00000024863.7	novel	1089	6	NA	NA	4992	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGACTCTTGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	30215333	30217079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_30215462_30215786_30215856_30216550
ES.17656.1	chr19	-	207	1	Intergenic	novelGene_14645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAAACCTATGTTTAA	NA	False	NA	NA	False	NA	NA	NA	30648442	30648235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30648200_30648400
ES.17657.1	chr19	-	155	1	Intergenic	novelGene_14646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	30691355	30691200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_30691200_30691400
ES.17658.1	chr19	+	240	1	Intergenic	novelGene_14647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATTTGAAATTCTGA	2794	False	NA	NA	False	AATAAA	-26	NA	30966661	30966901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_30966700_30966900
ES.17659.1	chr19	+	3759	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	1	473	1	-473	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGTTTCATTTTAT	NA	False	NA	19	True	AATAAA	-21	NA	31060237	31063996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_31060200_31064000
ES.17659.2	chr19	+	3539	2	Genic_Genomic	ENSMUSG00000053536.8	novel	4233	1	NA	NA	162	-475	multi-exon	TRUE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTATGTTTCATTTT	NA	False	NA	17	True	AATAAA	-19	NA	31060398	31063994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_31062051_31062107
ES.17659.3	chr19	+	3455	2	Genic_Genomic	ENSMUSG00000053536.8	novel	4233	1	NA	NA	185	-479	multi-exon	TRUE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATTTTGTATGTTTCA	NA	False	NA	13	True	AATAAA	-15	NA	31060421	31063990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_31062032_31062145
ES.1766.1	chr1	+	2363	4	NNC	ENSMUSG00000104011.2	novel	540	3	NA	NA	-3967	491	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.29983164553722	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCCGACTGTGTTGTG	7929	False	NA	NA	False	NA	NA	NA	164286043	164292049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164287310_164289944_164290168_164290325_164290407_164291256
ES.1766.2	chr1	+	1696	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	7954	False	NA	NA	False	TTTAAA	-24	NA	164286068	164287764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164286100_164287800
ES.1766.3	chr1	+	4980	3	NNC	ENSMUSG00000104011.2	novel	540	3	NA	NA	-3936	491	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCCGACTGTGTTGTG	7960	False	NA	NA	False	NA	NA	NA	164286074	164292049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_164290168_164290325_164290407_164291243
ES.1766.4	chr1	+	1804	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCCCTTAGCTGTCG	7978	False	NA	NA	False	NA	NA	NA	164286092	164287896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164286100_164287900
ES.1766.5	chr1	+	1542	2	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	8629	False	NA	NA	False	AAAACA	-42	NA	164286743	164294892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164287400_164294006
ES.1766.6	chr1	+	2425	1	Genic_Genomic	ENSMUSG00000104011.2	novel	NA	NA	NA	NA	-385	492	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCGACTGTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	164289625	164292050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_164289600_164292000
ES.1766.7	chr1	+	2941	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAAAATCTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	164292004	164294945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164292000_164294900
ES.17660.1	chr19	+	5805	1	Intergenic	novelGene_14648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTTAAAAACTCTCATC	5752	False	NA	NA	False	TATAAA	-36	NA	31091299	31097104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091300_31097100
ES.17660.2	chr19	+	5616	1	Intergenic	novelGene_14650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGTTCTGTTCATGA	5790	False	NA	NA	False	NA	NA	NA	31091337	31096953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091300_31097000
ES.17660.3	chr19	+	134	1	Intergenic	novelGene_14649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATTGAGTTACCGTCGT	5790	False	NA	16	True	NA	NA	NA	31091337	31091471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091300_31091500
ES.17660.4	chr19	+	2693	2	Antisense	novelGene_ENSMUSG00000052920.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTGTTCA	5790	False	NA	NA	False	NA	NA	NA	31091337	31096950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_31091557_31094476
ES.17660.5	chr19	+	3059	1	Intergenic	novelGene_14651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTCTTACACTTTCAT	5796	False	NA	NA	False	TATAAA	-18	NA	31091343	31094402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091300_31094400
ES.17660.6	chr19	+	3821	1	Intergenic	novelGene_14652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGCTTTGGGTATTC	5797	False	NA	NA	False	AATAAA	-16	NA	31091344	31095165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091300_31095200
ES.17660.7	chr19	+	2895	1	Intergenic	novelGene_14653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTTCTTTGTACAT	5806	False	NA	NA	False	AATAAA	-10	NA	31091353	31094248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31091400_31094200
ES.17661.1	chr19	+	185	1	Intergenic	novelGene_14654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAGTCTCACAATCA	NA	False	NA	NA	False	NA	NA	NA	31219421	31219606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_31219400_31219600
ES.17662.1	chr19	-	171	1	Intergenic	novelGene_14655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTGGGGGGAGTGGC	NA	False	NA	NA	False	NA	NA	NA	31254147	31253976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_31254000_31254100
ES.17663.1	chr19	+	169	1	Intergenic	novelGene_14656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32094983	32095152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32095000_32095200
ES.17664.1	chr19	-	175	1	Intergenic	novelGene_14657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAGAAAGA	5500	False	NA	NA	False	NA	NA	NA	32097664	32097489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32097500_32097700
ES.17665.1	chr19	+	5946	1	Intergenic	novelGene_14659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAAGCCATGCAGAAT	NA	False	NA	NA	False	NA	NA	NA	32122769	32128715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32122800_32128700
ES.17666.1	chr19	+	2455	1	Intergenic	novelGene_14660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAACCAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	32141569	32144024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32141600_32144000
ES.17667.1	chr19	+	251	1	Intergenic	novelGene_14665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAACCTCCCTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	32287112	32287363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32287100_32287400
ES.17668.1	chr19	+	4478	1	Antisense	novelGene_ENSMUSG00000040451.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTATACATATTTTCA	NA	False	NA	NA	False	CATAAA	-37	NA	32322881	32327359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_32322900_32327400
ES.17669.1	chr19	+	148	1	Intergenic	novelGene_14667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAACCCACAATC	NA	False	NA	NA	False	NA	NA	NA	32351528	32351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32351500_32351700
ES.1767.1	chr1	-	173	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAACTCA	2583	False	NA	NA	False	NA	NA	NA	164150366	164150193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_164150200_164150400
ES.17670.1	chr19	+	1978	1	Genic_Genomic	ENSMUSG00000097787.3	novel	NA	NA	NA	NA	-16	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAAGAGAATTCTAAC	NA	False	NA	NA	False	NA	NA	NA	32366599	32368577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_32366600_32368600
ES.17671.1	chr19	-	3262	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	2	-2	2	1	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTATTATATTGTGTTC	8021	False	NA	0	True	AATAAA	-19	NA	32188411	32100125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ES.17671.10	chr19	-	3278	7	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-3559	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.9611768910928	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	4017	False	NA	-4	True	AATAAA	-15	NA	32219785	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219663
ES.17671.11	chr19	-	3727	11	NIC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	78.2049231186886	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8388	False	NA	-4	True	AATAAA	-15	NA	32365855	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32237375_32237498_32266940_32267032_32329344_32329424_32365619
ES.17671.12	chr19	-	3508	9	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-10339	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.3149690353	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	NA	False	NA	-4	True	AATAAA	-15	NA	32277318	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32277100
ES.17671.13	chr19	-	3738	7	NIC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-501	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	72.3225798458238	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGGCTATTATAT	7075	False	NA	-7	True	AATAAA	-12	NA	32216727	32100132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32216142
ES.17671.14	chr19	-	4928	3	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	27710	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGGCTATTATAT	NA	False	NA	-7	True	AATAAA	-12	NA	32109913	32100132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102629_32102793_32106940
ES.17671.15	chr19	-	3594	9	NIC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	77.6176526313441	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGGCTATTATAT	8353	False	NA	-7	True	AATAAA	-12	NA	32365890	32100132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32266940_32267032_32329344_32329424_32365619
ES.17671.16	chr19	-	3206	6	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3448	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.9223450577973	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGGCTATTATAT	4128	False	NA	-7	True	AATAAA	-12	NA	32219674	32100132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32136923_32137764_32200908_32200991_32219503
ES.17671.17	chr19	-	3278	8	NNC	ENSMUSG00000040451.19	novel	1986	10	NA	NA	-11951	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.4927065723663	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGGCTATTATAT	4914	False	NA	-7	True	AATAAA	-12	NA	32237360	32100132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32133969_32134048_32136923_32137764_32200908_32200991_32225393_32225437_32237238
ES.17671.19	chr19	-	3611	10	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	585	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	77.2024754928378	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTATGTGGCTATTAT	8965	False	NA	-9	True	AATAAA	-10	NA	32365278	32100134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365031
ES.17671.2	chr19	-	3532	10	NIC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	2	2	junction_9	77.0528117752307	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	7132	False	NA	-1	True	AATAAA	-18	NA	32367111	32100126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32366951
ES.17671.20	chr19	-	3349	9	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-13029	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.3149690353	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTATGTGGCTATTAT	9558	False	NA	-9	True	AATAAA	-10	NA	32313658	32100134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32313594
ES.17671.21	chr19	-	3660	11	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.9805464729286	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTATGTGGCTATTAT	8417	False	NA	-9	True	AATAAA	-10	NA	32365826	32100134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32176298_32176388_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.22	chr19	-	3143	7	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.7179308807113	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGTATGTGGCTATTA	8037	False	NA	-10	True	AATAAA	-9	NA	32188395	32100135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101582_32101674_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ES.17671.23	chr19	-	3343	9	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-455	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.4166245365582	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTAAAGTTATTATTC	7876	False	NA	3	True	AATAAA	-30	NA	32366367	32100231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32266940_32267032_32329344_32329424_32366248
ES.17671.24	chr19	-	3891	6	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	44	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.6933288150908	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTAAAGTTATTATTC	8063	False	NA	3	True	AATAAA	-30	NA	32188369	32100231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136146_32137764_32188227
ES.17671.25	chr19	-	3226	7	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	18	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.9470816459615	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTGTAAAGTTATTA	8037	False	NA	0	True	AATAAA	-27	NA	32188395	32100234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32176298_32176388_32188227
ES.17671.26	chr19	-	3291	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3476	-105	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTGTAAAGTTATTA	4100	False	NA	0	True	AATAAA	-27	NA	32219702	32100234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
ES.17671.27	chr19	-	3134	6	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3478	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.9223450577973	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTGTAAAGTTATTA	4098	False	NA	0	True	AATAAA	-27	NA	32219704	32100234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32136923_32137764_32200908_32200991_32219503
ES.17671.28	chr19	-	3126	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	117	19	-115	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	8038	False	NA	-10	True	AATAAA	-17	NA	32188394	32100244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ES.17671.29	chr19	-	3512	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	35	118	-14	-115	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	8366	False	NA	-10	True	AATAAA	-17	NA	32365877	32100244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.3	chr19	-	3504	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3581	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	60.6538447988987	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	3995	False	NA	-1	True	AATAAA	-18	NA	32219807	32100126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219462
ES.17671.30	chr19	-	3469	9	NIC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-14	-115	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	77.6176526313441	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	8366	False	NA	-10	True	AATAAA	-17	NA	32365877	32100244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32266940_32267032_32329344_32329424_32365619
ES.17671.31	chr19	-	3217	7	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3449	-115	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	72.004050811974	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	4127	False	NA	-10	True	AATAAA	-17	NA	32219675	32100244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219499
ES.17671.32	chr19	-	3373	9	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	499	-115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.3149690353	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTAAATCTTTGT	NA	False	NA	-10	True	AATAAA	-17	NA	32300130	32100244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32299932
ES.17671.33	chr19	-	3205	8	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-11951	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	75.9142910909187	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTAAATCTTTG	4914	False	NA	-11	True	AATAAA	-16	NA	32237360	32100245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32237238
ES.17671.34	chr19	-	2325	6	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	68	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.2435143657111	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTAAATCTTTG	8087	False	NA	-11	True	AATAAA	-16	NA	32188345	32100245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32176298_32176388_32188227
ES.17671.35	chr19	-	3179	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	35	451	-14	-448	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATGTAATTCTGAGTT	8366	False	NA	NA	False	AATATA	-12	NA	32365877	32100577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.36	chr19	-	2365	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	42	1258	-7	160	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATACTTTTCATATCT	8373	False	NA	NA	False	AATAAA	-19	NA	32365870	32101384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.37	chr19	-	1828	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	19	1415	19	2	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACTGTAGACATTTCCT	8038	False	NA	NA	False	AATAAA	-17	NA	32188394	32101542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ES.17671.38	chr19	-	2190	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	57	1418	8	0	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCACTGTAGACATTTC	8388	False	NA	NA	False	AATAAA	-15	NA	32365855	32101544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.39	chr19	-	1487	10	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.8675185445649	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCACTGTAGACATTT	8339	False	NA	NA	False	AATAAA	-14	NA	32365904	32101545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32176298_32176388_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.4	chr19	-	3658	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	5	2	5	1	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGCTATTATATTGTG	8336	False	NA	-3	True	AATAAA	-16	NA	32365907	32100128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.40	chr19	-	1287	4	ISM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	24	6800	24	-5381	5prime_fragment	FALSE	canonical	3	81	junction_3	48.1409966198827	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCTTTGTAATTGTC	8043	False	NA	NA	False	NA	NA	NA	32188389	32106927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_32107095_32120145_32120264_32136923_32137764_32188227
ES.17671.41	chr19	-	1010	1	Intergenic	novelGene_14658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTACTCATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	32123778	32122768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32122800_32123800
ES.17671.42	chr19	-	2262	2	ISM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	35	35525	35	3	5prime_fragment	FALSE	canonical	3	81	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAAAAAG	8054	False	NA	NA	False	AATAGA	-36	NA	32188378	32135652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_32137764_32188227
ES.17671.43	chr19	-	2248	1	Intergenic	novelGene_14661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGGCTCCTGGGGCAG	5300	False	NA	NA	False	NA	NA	NA	32150058	32147810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32147800_32150100
ES.17671.44	chr19	-	5556	2	Genic_Genomic	ENSMUSG00000040451.19	novel	3262	6	NA	NA	18	19717	multi-exon	FALSE	non_canonical	0	0	junction_1	0	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCTGGAGAGATGGCTC	8037	False	NA	NA	False	NA	NA	NA	32188395	32176439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_32180572_32186971
ES.17671.45	chr19	-	824	3	NNC	ENSMUSG00000040451.19	novel	483	3	NA	NA	-3510	124	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.5	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCTCTTTCCTTTGTC	4066	False	NA	NA	False	ATTAAA	-19	NA	32219736	32196032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32196542_32200908_32200991_32219503
ES.17671.46	chr19	-	168	1	Intergenic	novelGene_14662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	32197449	32197281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32197300_32197400
ES.17671.47	chr19	-	3538	5	ISM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	3	97829	3	31	5prime_fragment	FALSE	canonical	3	26	junction_2	6.13901457890434	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAACCTGGGGTAACCT	8334	False	NA	NA	False	NA	NA	NA	32365909	32197955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ES.17671.48	chr19	-	3437	1	Intergenic	novelGene_14663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACCAGGTAATCTTAC	NA	False	NA	NA	False	NA	NA	NA	32243964	32240527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32240500_32244000
ES.17671.49	chr19	-	5653	1	Intergenic	novelGene_14664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACAGTTGTCTCTAATG	9419	False	NA	NA	False	NA	NA	NA	32250541	32244888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32244900_32250500
ES.17671.5	chr19	-	3267	8	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	-3476	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.8317695139753	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGCTATTATATTGTG	4100	False	NA	-3	True	AATAAA	-16	NA	32219702	32100128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101582_32101674_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219499
ES.17671.50	chr19	-	1301	1	Intergenic	novelGene_14666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	32313035	32311734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32311700_32313000
ES.17671.6	chr19	-	3649	10	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	439	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	81.9834370505243	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGCTATTATATTGTG	NA	False	NA	-3	True	AATAAA	-16	NA	32300190	32100128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32299213_32299314_32299932
ES.17671.7	chr19	-	3476	10	NNC	ENSMUSG00000040451.19	novel	3665	10	NA	NA	194	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	77.3531264580786	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	7323	False	NA	-4	True	AATAAA	-15	NA	32366920	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32366813
ES.17671.8	chr19	-	3360	7	NNC	ENSMUSG00000040451.19	novel	4036	10	NA	NA	-3481	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	68.5362839831736	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	4095	False	NA	-4	True	AATAAA	-15	NA	32219707	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32219503
ES.17671.9	chr19	-	3372	7	NNC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.4786540484326	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8077	False	NA	-4	True	AATAAA	-15	NA	32188355	32100129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32176298_32176469_32188227
ES.17672.1	chr19	-	183	1	Intergenic	novelGene_14668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	32394040	32393857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32393900_32394000
ES.17673.1	chr19	-	176	1	Intergenic	novelGene_14669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAGGATAATAATA	NA	False	NA	NA	False	NA	NA	NA	32395129	32394953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32395000_32395100
ES.17674.1	chr19	-	379	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	339	-4	339	4	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGTAAAAATGTGTAGC	NA	False	NA	NA	False	AATAAA	-39	NA	32443639	32443260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32443300_32443600
ES.17675.1	chr19	-	119	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	3	592	3	-592	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCGGAGGGACTTCA	NA	False	NA	NA	False	NA	NA	NA	32443975	32443856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32443900_32444000
ES.17676.1	chr19	+	2506	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	113	-6	-41	6	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCATTGAAATTCAGTC	NA	False	NA	29	True	AATAAA	-36	NA	32463281	32492770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ES.17676.10	chr19	+	3540	1	Intergenic	novelGene_14670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAACAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	32485598	32489138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32485600_32489100
ES.17676.11	chr19	+	3219	1	NIC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	26212	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCAAGTCATCTCTGCA	3601	False	NA	12	True	AATAAA	-19	NA	32489534	32492753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32489500_32492800
ES.17676.2	chr19	+	2309	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	-29	-4	-29	4	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTAGATATTTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	32463293	32465602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32463300_32465600
ES.17676.3	chr19	+	2354	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	148	111	-6	-111	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATTTAATTGTAGAGATT	NA	False	NA	-88	True	AATAAA	-13	NA	32463316	32492653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ES.17676.4	chr19	+	2496	6	NNC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.570345641784	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCAAGTCATCTCTGCA	NA	False	NA	12	True	AATAAA	-19	NA	32463324	32492753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32490847_32490898_32491372
ES.17676.5	chr19	+	9193	3	NIC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	11	-5	intron_retention	FALSE	canonical	3	240	junction_2	38.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATCTCTGCACTCATT	NA	False	NA	18	True	AATAAA	-25	NA	32463333	32492759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32463960_32468737_32475918_32491372
ES.17676.6	chr19	+	2239	4	NIC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	12	-110	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	133.16405921519	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATTGTAGAGATTT	NA	False	NA	-87	True	AATAAA	-14	NA	32463334	32492654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32463960_32468737_32468936_32475783_32475918_32491372
ES.17676.8	chr19	+	2457	6	NNC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	53	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.293311479623	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCAAGTCATCTCTGCA	NA	False	NA	12	True	AATAAA	-19	NA	32463375	32492753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32490847_32490910_32491372
ES.17676.9	chr19	+	3231	3	ISM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	6484	11	6330	-11	3prime_fragment	FALSE	canonical	3	240	junction_2	12.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCAAGTCATCTCTGCA	NA	False	NA	12	True	AATAAA	-19	NA	32469652	32492753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_32471369_32475783_32475918_32491372
ES.17677.1	chr19	+	191	1	Intergenic	novelGene_14673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCAATGCTGTT	NA	False	NA	NA	False	NA	NA	NA	32683682	32683873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32683700_32683900
ES.17678.1	chr19	+	177	1	Intergenic	novelGene_14674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	32699517	32699694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32699500_32699700
ES.17679.1	chr19	-	3869	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	18	-116	7	116	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGGGGAAAATTCTG	NA	False	NA	NA	False	AGTAAA	-15	NA	32689713	32648921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.10	chr19	-	2908	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-53	916	-53	268	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGAATTTTTATGGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	32689784	32649953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.12	chr19	-	2723	9	NIC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	2	262	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	142.43156251337	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAGCACTGAATTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	32689695	32649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32651765_32654116_32654251_32661401_32661453_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.13	chr19	-	3111	12	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	3	262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	205.792682326592	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAGCACTGAATTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	32689717	32649959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675404_32675507_32675839_32676041_32678085_32678260_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.14	chr19	-	2953	12	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	1	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	187.875332324038	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATTACAGCACTGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32689730	32649963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32682304_32682378_32682479_32682516_32684234_32684410_32689665
ES.17679.15	chr19	-	2759	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-38	258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.604072335656	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATTACAGCACTGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32689769	32649963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651311_32651434_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.16	chr19	-	2806	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	37	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	139.76408694654	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATTACAGCACTGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32689660	32649963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689633
ES.17679.17	chr19	-	2784	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	7	258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	137.875144807016	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATTACAGCACTGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32689713	32649963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32678998_32679939_32680039_32684234_32684410_32689665
ES.17679.18	chr19	-	2938	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	6	258	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	173.202222849477	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATTACAGCACTGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32689691	32649963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32660950_32661084_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.19	chr19	-	2813	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	1	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.814163131348	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTATATTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	32689719	32650019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32682479_32682516_32684234_32684410_32689665
ES.17679.2	chr19	-	3753	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	18	0	7	0	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGCCTCTCTTAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	32689713	32649037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.20	chr19	-	2619	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-21	1173	-21	11	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTAGTTCTTGATTGTT	NA	False	NA	-7	True	AATAAA	-28	NA	32689752	32650210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.21	chr19	-	2614	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	7	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.814163131348	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTAGTTCTTGATTG	NA	False	NA	-9	True	AATAAA	-26	NA	32689713	32650212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32682479_32682516_32684234_32684410_32689665
ES.17679.22	chr19	-	3631	3	ISM	ENSMUSG00000013662.7	ENSMUST00000238016.2	1905	5	8915	0	8915	0	3prime_fragment	FALSE	canonical	3	346	junction_2	54	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32663355	32650221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_32651765_32654116_32654251_32661401
ES.17679.23	chr19	-	2222	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.604072335656	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTTCCCCACTTAG	NA	False	NA	-19	True	AATAAA	-16	NA	32689714	32650222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32650278_32650624_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.26	chr19	-	2366	6	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-1992	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	166.143793143169	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTTCCCCACTTAG	8583	False	NA	-19	True	AATAAA	-16	NA	32674262	32650222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32673820
ES.17679.27	chr19	-	2578	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.362835792043	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTTCCCCACTTAG	NA	False	NA	-19	True	AATAAA	-16	NA	32689731	32650222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654243_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.28	chr19	-	2679	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	173.498731983839	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTTTTTTCCCCACTT	NA	False	NA	-21	True	AATAAA	-14	NA	32689759	32650224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32685471_32685539_32689665
ES.17679.29	chr19	-	2380	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-8	1399	-8	-215	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTAATTTCTCTAGTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	32689739	32650436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.3	chr19	-	3898	1	NIC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	19334	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAGCCTCTCTTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	32652936	32649038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_32649000_32652900
ES.17679.30	chr19	-	2196	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	7	1568	-4	-384	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCCAGTAGCCAGACT	NA	False	NA	NA	False	TATAAA	-15	NA	32689724	32650605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.31	chr19	-	1942	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-41	1870	-41	-686	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCAGTCCTCTTTAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	32689772	32650907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.32	chr19	-	182	1	Intergenic	novelGene_14671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32655839	32655657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32655700_32655800
ES.17679.33	chr19	-	186	1	Intergenic	novelGene_14672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGCAGAGAAGAGG	5098	False	NA	NA	False	NA	NA	NA	32677747	32677561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32677600_32677700
ES.17679.4	chr19	-	3842	11	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.008352735976	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTAAGCCTCTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	32689713	32649040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32682423_32682516_32684234_32684410_32689665
ES.17679.5	chr19	-	3765	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	12508	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	139.76408694654	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTTTTAAGCCTCT	8193	False	NA	NA	False	AATAAA	-14	NA	32704643	32649044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32704576
ES.17679.6	chr19	-	3648	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	-43	166	-43	-166	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGGGTTTGATTCAAGA	NA	False	NA	2	True	AATAAA	-24	NA	32689774	32649203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.7	chr19	-	3470	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	12	-169	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	136.12584954218	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACGGGTTTGATTCA	NA	False	NA	-1	True	AATAAA	-21	NA	32689685	32649206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675925_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.17679.9	chr19	-	2777	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	-8	268	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	136.12584954218	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGAATTTTTATGGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	32689739	32649953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675925_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ES.1768.1	chr1	-	2284	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	164263708	164261424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_164261400_164263700
ES.17680.1	chr19	+	248	1	Intergenic	novelGene_14677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATTTTTTTTATCAT	3439	False	NA	NA	False	AATACA	-27	NA	32715837	32716085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32715800_32716100
ES.17681.1	chr19	-	180	2	Intergenic	novelGene_14675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	9012	False	NA	NA	False	NA	NA	NA	32730768	32712256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32712264_32730595
ES.17681.2	chr19	-	189	1	Intergenic	novelGene_14676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAACCAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	32713812	32713623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32713600_32713800
ES.17681.3	chr19	-	182	1	Intergenic	novelGene_14678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGCCTGT	9010	False	NA	NA	False	NA	NA	NA	32730770	32730588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32730600_32730800
ES.17682.1	chr19	+	5582	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	-31	2741	-31	-2741	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTGCATTTTTCTAT	7562	False	NA	NA	False	ATTAAA	-36	NA	32734865	32800819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.10	chr19	+	4491	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	90	3711	-8	-3711	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACTTTATTTCAGTTA	7683	False	NA	NA	False	NA	NA	NA	32734986	32799849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.11	chr19	+	5378	10	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	1	3769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	46.3060137949732	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACATCAAAAATAATTGC	7692	False	NA	NA	False	NA	NA	NA	32734995	32807329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242_32800721_32807304
ES.17682.12	chr19	+	8083	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	99	110	1	-110	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTTTTATGAAGTTC	7692	False	NA	NA	False	ATTAAA	-18	NA	32734995	32803450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.13	chr19	+	5279	9	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	1	-2837	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.8153408264246	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGGTGTTTTATTA	7692	False	NA	NA	False	ATTAAA	-15	NA	32734995	32800723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777337_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.15	chr19	+	2271	10	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	15	2348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.3060137949732	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTATTCCAGTTTTAT	7706	False	NA	NA	False	AATAAA	-14	NA	32735009	32797725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735452_32735524_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.16	chr19	+	1244	1	NIC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	26	-43979	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACGCTTTGGGTTGTGCA	7717	False	NA	NA	False	AATGAA	-20	NA	32735020	32736264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32735000_32736300
ES.17682.17	chr19	+	5188	8	NIC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	26	-2838	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.1620075877419	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGGGTGTTTTATT	7717	False	NA	NA	False	ATTAAA	-14	NA	32735020	32800722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32792816_32792984_32795235_32795461_32797242
ES.17682.18	chr19	+	2062	9	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	31	2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.388402536145	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTTGAATA	7722	False	NA	NA	False	GATAAA	-9	NA	32735025	32797464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753492_32769945_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.19	chr19	+	3970	5	NNC	ENSMUSG00000013663.8	novel	4086	5	NA	NA	32	-2859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.6353534355798	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAAGTCTCATTCTTG	7723	False	NA	NA	False	TATAAA	-14	NA	32735026	32800701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775519_32797806
ES.17682.2	chr19	+	2241	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	-8	6059	-8	2124	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTTA	7585	False	NA	NA	False	AATAAA	-16	NA	32734888	32797501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.21	chr19	+	4867	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	130	3295	32	-3295	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTAGTTTTAGAAAAT	7723	False	NA	NA	False	AATAAA	-17	NA	32735026	32800265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.22	chr19	+	3111	5	NNC	ENSMUSG00000013663.8	novel	4086	5	NA	NA	32	-3718	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.6353534355798	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTCTCCTTACTTTATT	7723	False	NA	NA	False	NA	NA	NA	32735026	32799842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775519_32797806
ES.17682.23	chr19	+	6340	9	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	32	3769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.1382411855129	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACATCAAAAATAATTGC	7723	False	NA	NA	False	NA	NA	NA	32735026	32807329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32737002_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242_32800721_32807304
ES.17682.24	chr19	+	7757	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	130	405	32	-405	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTTTGGAAGTGTGC	7723	False	NA	NA	False	ATTAAA	-15	NA	32735026	32803155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.25	chr19	+	4820	8	NIC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	33	-3296	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	51.3109766670896	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTTAGTTTTAGAAAA	7724	False	NA	NA	False	AATAAA	-16	NA	32735027	32800264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_32735924_32753414_32753500_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.26	chr19	+	4871	10	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	33	-2836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.3060137949732	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGTGTTTTATTAA	7724	False	NA	NA	False	ATTAAA	-16	NA	32735027	32800724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242_32797350_32797803
ES.17682.27	chr19	+	5292	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	144	2856	46	-2856	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTCTCATTCTTGTCA	7737	False	NA	NA	False	TATAAA	-17	NA	32735040	32800704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.28	chr19	+	3303	1	Intergenic	novelGene_14680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	2737	False	NA	NA	False	NA	NA	NA	32780900	32784203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32780900_32784200
ES.17682.29	chr19	+	3442	1	Intergenic	novelGene_14681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAGTAGTCTTATGACA	4185	False	NA	NA	False	NA	NA	NA	32782348	32785790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32782300_32785800
ES.17682.3	chr19	+	2450	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	27	5815	27	2368	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAGACAGGCTGA	7620	False	NA	NA	False	AATAAA	-34	NA	32734923	32797745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.30	chr19	+	2368	1	Intergenic	novelGene_14682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTAGCATCAAGTAGCC	5435	False	NA	NA	False	AAAAAG	-8	NA	32783598	32785966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32783600_32786000
ES.17682.31	chr19	+	1550	2	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	14329	3747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2896	False	NA	NA	False	AGTAAA	-28	NA	32802953	32807307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32803815_32806618
ES.17682.32	chr19	+	188	1	Intergenic	novelGene_14683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAGAAAATAACTA	2	False	NA	NA	False	NA	NA	NA	32805449	32805637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32805400_32805600
ES.17682.33	chr19	+	1880	1	Intergenic	novelGene_14684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACATCAAAAATAATTGC	2	False	NA	NA	False	NA	NA	NA	32805449	32807329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32805400_32807300
ES.17682.34	chr19	+	200	1	Intergenic	novelGene_14685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGGTATAAAATGGT	932	False	NA	NA	False	ATTAAA	-23	NA	32806379	32806579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32806400_32806600
ES.17682.4	chr19	+	4034	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	76	4182	-22	4001	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTAGGATTTACACATT	7669	False	NA	NA	False	AATAAA	-21	NA	32734972	32799378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.5	chr19	+	8215	9	NNC	ENSMUSG00000013663.8	novel	8292	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.7262762788211	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTCTTAGCTTTT	7671	False	NA	4	True	ATTAAA	-19	NA	32734974	32803560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792985_32795235_32795461_32797242
ES.17682.7	chr19	+	7515	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	85	692	-13	-692	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAACAAGGATTCATAT	7678	False	NA	NA	False	AATAAA	-22	NA	32734981	32802868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ES.17682.8	chr19	+	3838	3	ISM	ENSMUSG00000013663.8	ENSMUST00000140014.2	4086	5	-10	7481	-10	-7481	5prime_fragment	FALSE	canonical	3	140	junction_1	5.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATATCGTTTGAGTT	7681	False	NA	NA	False	NA	NA	NA	32734984	32772762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_32735924_32753414_32753500_32769948
ES.17683.1	chr19	-	180	1	Intergenic	novelGene_14679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGTAAAGAAA	6298	False	NA	NA	False	NA	NA	NA	32751078	32750898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32750900_32751100
ES.17684.1	chr19	-	3936	2	Antisense	novelGene_ENSMUSG00000013663.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	32768540	32764526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_32765631_32765708
ES.17685.1	chr19	-	6337	1	Antisense	novelGene_ENSMUSG00000013663.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACATTTTAGGCAAAGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	32789170	32782833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_32782800_32789200
ES.17686.1	chr19	-	3018	1	Antisense	novelGene_ENSMUSG00000013663.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCATTTCAGTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	32800516	32797498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_32797500_32800500
ES.17686.2	chr19	-	1534	1	Antisense	novelGene_ENSMUSG00000013663.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGTTGAATCTC	NA	False	NA	NA	False	AAAACA	-4	NA	32800087	32798553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_32798600_32800100
ES.17687.1	chr19	-	2936	1	Intergenic	novelGene_14686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTTAAGAAGTCCTTT	NA	False	NA	NA	False	AATAAA	-40	NA	32837746	32834810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32834800_32837700
ES.17688.1	chr19	+	183	1	Intergenic	novelGene_14687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32850912	32851095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32850900_32851100
ES.17689.1	chr19	-	663	3	Intergenic	novelGene_14688	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGCATGAATGATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	32889448	32888510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_32888981_32889085_32889239_32889408
ES.1769.10	chr1	-	3238	6	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	25	-1	intron_retention	FALSE	canonical	0	0	junction_4	498.19835407195	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACGTGTGTGACTCGAT	NA	False	NA	-17	True	AATAAA	-15	NA	164285566	164264678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164280040_164281187_164285329
ES.1769.12	chr1	-	2465	7	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	-581	-2	intron_retention	FALSE	canonical	1	4	junction_6	461.408863036774	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACGTGTGTGACTCGA	NA	False	NA	-18	True	AATAAA	-14	NA	164286505	164264679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329_164285597_164286290
ES.1769.13	chr1	-	7249	2	ISM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	13237	2	-1399	-2	intron_retention	FALSE	canonical	3	1293	junction_1	0	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACGTGTGTGACTCGA	NA	False	NA	-18	True	AATAAA	-14	NA	164272687	164264679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164266109_164266867
ES.1769.14	chr1	-	5873	4	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	528.977000130125	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCACGTGTGTGACTC	NA	False	NA	-20	True	AATAAA	-12	NA	164285592	164264681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266111_164266867_164270920_164281057_164281187_164285329
ES.1769.17	chr1	-	2126	7	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	15	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	462.867061548634	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTCACGTGTGTGAC	NA	False	NA	-22	True	AATAAA	-10	NA	164285576	164264683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266109_164266867_164266952_164269025_164269056_164269155_164269211_164270763_164270920_164281057_164281187_164285329
ES.1769.19	chr1	-	2999	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-568	149	-568	-149	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAGTACCCCATAGACT	NA	False	NA	16	True	AATAAA	-29	NA	164286492	164264826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ES.1769.21	chr1	-	5646	3	ISM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	12593	175	-2043	-175	intron_retention	FALSE	canonical	3	1267	junction_2	13	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATTTTGAACTTTATA	NA	False	NA	-10	True	AATAAA	-29	NA	164273331	164264852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164266109_164266867_164266952_164269025
ES.1769.25	chr1	-	1580	7	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	-477	-714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	462.867061548634	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTCCTTTCTTTCTT	NA	False	NA	-13	True	AATAAA	-11	NA	164286401	164265391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329_164285528_164286290
ES.1769.26	chr1	-	2153	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	-494	921	-494	-921	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTAGATTCCGTAACTG	NA	False	NA	NA	False	AATAAA	-33	NA	164286418	164265598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ES.1769.28	chr1	-	3537	2	FSM	ENSMUSG00000026576.13	ENSMUST00000192522.2	618	2	-244	-2675	89	2675	multi-exon	FALSE	canonical	3	1015	junction_1	0	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAAATCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	164285835	164278155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_164281187_164285329
ES.1769.5	chr1	-	2453	6	NNC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	491.477608849071	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285923	164264677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_164266109_164266867_164266952_164269151_164269211_164270763_164270920_164281057_164281187_164285329
ES.1769.7	chr1	-	6368	5	ISM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	355	0	22	0	intron_retention	FALSE	canonical	3	1205	junction_4	36.3593179253957	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285569	164264677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057
ES.1769.9	chr1	-	4652	5	NIC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	-519	0	intron_retention	FALSE	canonical	3	1015	junction_4	108.729020964966	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164286443	164264677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_164266109_164266867_164266952_164269025_164270920_164281057_164281187_164285329
ES.17690.1	chr19	+	199	1	Intergenic	novelGene_14689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTCTGATGGTTCCGAG	2004	False	NA	NA	False	AAGAAA	-1	NA	32962154	32962353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_32962200_32962400
ES.17691.1	chr19	+	214	1	Intergenic	novelGene_14690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATAACCGACTGACTTC	NA	False	NA	NA	False	AGTAAA	-19	NA	33157717	33157931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_33157700_33157900
ES.17692.1	chr19	+	1005	1	Antisense	novelGene_ENSMUSG00000071573.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGCTTAATGTGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	33369232	33370237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_33369200_33370200
ES.17693.1	chr19	-	1625	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-28	0	2	0	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCGTTTTATAGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	33369693	33115146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
ES.17693.2	chr19	-	1369	5	FSM	ENSMUSG00000071573.15	ENSMUST00000163093.2	1378	5	8	1	8	-1	multi-exon	FALSE	canonical	0	0	junction_4	8.20060973342836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCGTTTTATAGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	33369687	33115147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33369354
ES.17693.3	chr19	-	3327	4	ISM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	-22	242034	8	-242034	5prime_fragment	FALSE	canonical	3	11	junction_1	3.85861230093008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATAGCAATACTCTCT	NA	False	NA	NA	False	NA	NA	NA	33369687	33357180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_33359926_33367316_33367460_33368479_33368586_33369354
ES.17694.2	chr19	-	2761	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	76	2	76	1	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTCTGTTTCTTAAAA	NA	False	NA	-3	True	NA	NA	NA	33567632	33532561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
ES.17694.4	chr19	-	2610	10	NIC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	87	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	21.3148067702788	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTTTCTGTTTCTTA	NA	False	NA	-6	True	NA	NA	NA	33567621	33532564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
ES.17694.5	chr19	-	3147	13	NNC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	-5217	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.2674622122344	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTTTTCTGTTTCTT	NA	False	NA	-7	True	NA	NA	NA	33572925	33532565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567936_33568044_33568161_33568210_33572348
ES.17695.1	chr19	+	177	1	Intergenic	novelGene_14691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTG	NA	False	NA	NA	False	NA	NA	NA	33591946	33592123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_33591900_33592100
ES.17696.1	chr19	-	2185	7	NIC	ENSMUSG00000087303.4	novel	2184	9	NA	NA	-10499	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	8.38649708360608	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTCTTCTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33739258	33697071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_33698425_33699077_33699150_33700229_33700302_33724238_33724349_33725834_33726034_33726818_33726937_33738997
ES.17696.2	chr19	-	2169	8	NNC	ENSMUSG00000087303.4	novel	2184	9	NA	NA	-10307	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	21.1978050461719	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTCTTCTGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33739066	33697071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_33698425_33699077_33699150_33724238_33724349_33725834_33726034_33726818_33726937_33728653_33728760_33737292_33737435_33738997
ES.17696.3	chr19	-	2548	10	NNC	ENSMUSG00000087303.4	novel	2184	9	NA	NA	-10522	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.0320730484212	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCAGTCTTCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	33739281	33697073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_33698425_33699077_33699150_33700229_33700302_33708205_33708350_33723297_33723447_33724238_33724349_33726818_33726937_33728653_33728760_33737292_33737435_33738997
ES.17697.1	chr19	+	2081	1	Genic_Genomic	ENSMUSG00000037603.8	novel	NA	NA	NA	NA	2027	1947	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTCAACTTTTCAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	33802334	33804415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_33802300_33804400
ES.17698.1	chr19	+	134	1	Intergenic	novelGene_14692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTCTTGGTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	33869000	33869134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_33869000_33869100
ES.17699.1	chr19	+	1985	12	NNC	ENSMUSG00000024776.19	novel	2024	11	NA	NA	-222	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.6879660096028	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	34169406	34217722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34169467_34169716_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.2	chr19	+	2057	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	-31	-2	-31	2	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTTGTCACATTTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	34169597	34217735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.3	chr19	+	1908	10	NIC	ENSMUSG00000024776.19	novel	1988	11	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.573337271116	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	34169617	34217722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34169996_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.4	chr19	+	1859	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	-2	131	-2	-129	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAAGTTTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34169626	34217602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.5	chr19	+	1940	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	48	0	48	0	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	34169676	34217733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.6	chr19	+	2080	12	NNC	ENSMUSG00000024776.19	novel	2024	11	NA	NA	50	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.0736401513828	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	34169678	34217722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34170032_34194693_34194811_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.7	chr19	+	2052	12	NNC	ENSMUSG00000024776.19	novel	2024	11	NA	NA	57	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0736401513828	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	34169685	34217722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34170032_34191233_34191330_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.17699.8	chr19	+	5545	9	NIC	ENSMUSG00000024776.19	novel	1988	11	NA	NA	59	-6	intron_retention	FALSE	canonical	3	29	junction_1	12.9705194576008	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAAGCTGTCCGGTTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	34169687	34217725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34208927_34211360_34211719_34212609_34212735_34213675_34216289_34216902_34217003_34217416
ES.17699.9	chr19	+	1806	11	NNC	ENSMUSG00000024776.19	novel	4234	6	NA	NA	454	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4158819570897	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	False	NA	NA	False	AATAAA	-10	NA	34170675	34217722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34170872_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ES.177.1	chr1	-	157	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	21547285	21547128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_21547100_21547300
ES.1770.1	chr1	-	1757	3	Antisense	novelGene_ENSMUSG00000104011.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCAGAGTGACTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	164290937	164287267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_164288368_164290187_164290346_164290438
ES.17700.1	chr19	-	331	1	Intergenic	novelGene_14693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGTATCTACTACAAA	NA	False	NA	NA	False	NA	NA	NA	34174937	34174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34174600_34174900
ES.17701.1	chr19	+	161	1	Intergenic	novelGene_14694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34263056	34263217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34263100_34263200
ES.17702.1	chr19	+	1595	10	NNC	ENSMUSG00000024778.14	novel	1625	10	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.42495727816442	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTCTGTTGTCTTGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	34268109	34305170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34268145_34277430_34277591_34284524_34284679_34292578_34292717_34293968_34294078_34295989_34296052_34296182_34296237_34296709_34296790_34297960_34297986_34304392
ES.17703.1	chr19	-	2991	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	-20	-2	-20	2	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTGTGGTGTTTGCTT	5895	False	NA	0	True	AATAAA	-22	NA	34504894	34469715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
ES.17703.3	chr19	-	5913	3	NNC	ENSMUSG00000024781.17	novel	663	4	NA	NA	2622	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	19.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACATCGGTGTGGTGTT	NA	False	NA	-5	True	AATAAA	-17	NA	34476631	34469720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_34471614_34472459_34475270_34475421
ES.17703.4	chr19	-	2486	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	6	477	6	-477	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGAGCTCTGTTGGTTC	5921	False	NA	NA	False	ATTAAA	-32	NA	34504868	34470194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
ES.17703.5	chr19	-	1365	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	13	1591	-9	137	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTTTTCCTT	5928	False	NA	NA	False	AATAGA	-40	NA	34504861	34471308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
ES.17704.1	chr19	-	3924	7	FSM	ENSMUSG00000009378.5	ENSMUST00000009522.4	4051	7	127	0	127	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAACAATTGTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	34724562	34645802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34648294_34649835_34650096_34652206_34652787_34654683_34654828_34657687_34657792_34668043_34668292_34724465
ES.17705.1	chr19	+	177	1	Intergenic	novelGene_14695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	34760497	34760674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34760500_34760700
ES.17706.1	chr19	+	173	1	Intergenic	novelGene_14696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAATAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	34768359	34768532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34768400_34768500
ES.17707.1	chr19	+	3178	1	Antisense	novelGene_ENSMUSG00000033610.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAGTA	NA	False	NA	NA	False	NA	NA	NA	34804612	34807790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_34804600_34807800
ES.17708.1	chr19	+	2682	1	Intergenic	novelGene_14698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAAGAAAGGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	34851731	34854413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34851700_34854400
ES.17709.1	chr19	+	4985	1	Antisense	novelGene_ENSMUSG00000033610.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	34855885	34860870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_34855900_34860900
ES.1771.1	chr1	+	5356	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTCCACCCAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	164295533	164300889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164295500_164300900
ES.1771.2	chr1	+	1055	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTCATGATTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	164296709	164297764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164296700_164297800
ES.17710.1	chr19	-	5895	5	ISM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	52318	-2	50712	2	3prime_fragment	FALSE	canonical	3	103	junction_2	14.7372826531895	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGACTCTTTCTT	7490	False	NA	NA	False	AATAAA	-17	NA	34804537	34784337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519
ES.17710.10	chr19	-	1243	1	NIC	ENSMUSG00000033610.17	novel	2760	7	NA	NA	113	-36358	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTCTGTTAAGTTAT	996	False	NA	NA	False	NA	NA	NA	34855136	34853893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_34853900_34855100
ES.17710.11	chr19	-	2163	1	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	32	-37125	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGCTGATACCCGTGT	NA	False	NA	NA	False	NA	NA	NA	34856823	34854660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_34854700_34856800
ES.17710.2	chr19	-	4912	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	50	2452	50	1502	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTTTTTTTTAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	34856805	34786791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
ES.17710.3	chr19	-	4725	6	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	50	1492	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.4639179560236	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGTGTTTGTTGTTT	NA	False	NA	NA	False	ATTAAA	-5	NA	34856805	34786801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_34789788_34791091_34791218_34798499_34798624_34804519_34804774_34818156_34818510_34855923
ES.17710.4	chr19	-	3500	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	43	3871	43	83	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTGGTCGCTGCTGCT	NA	False	NA	71	True	NA	NA	NA	34856812	34788210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
ES.17710.5	chr19	-	2592	7	NNC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.1001325618726	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTAGTGTACATGTT	NA	False	NA	-13	True	AATAAA	-17	NA	34856835	34788294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34856770
ES.17710.6	chr19	-	4043	2	ISM	ENSMUSG00000033610.17	ENSMUST00000238065.2	2342	6	61611	1	61607	-1	3prime_fragment	FALSE	canonical	3	106	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCTTAGTGTACATGT	NA	False	NA	-14	True	AATAAA	-16	NA	34793642	34788295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_34789788_34791091
ES.17710.7	chr19	-	2517	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	74	4823	74	-868	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTTTGTTCCTCGT	NA	False	NA	NA	False	NA	NA	NA	34856781	34789162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
ES.17710.8	chr19	-	1735	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	494	5185	494	-1230	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAGAA	NA	False	NA	NA	False	AATATA	-28	NA	34856361	34789524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
ES.17710.9	chr19	-	2189	1	Intergenic	novelGene_14697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAAGAAAAGAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	34835126	34832937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34832900_34835100
ES.17711.1	chr19	+	181	1	Intergenic	novelGene_14699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	34863972	34864153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34864000_34864200
ES.17712.1	chr19	-	189	1	Intergenic	novelGene_14700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAAAGAATAG	7852	False	NA	NA	False	NA	NA	NA	34871606	34871417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34871400_34871600
ES.17713.1	chr19	+	4211	1	Intergenic	novelGene_14701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAAAAGATC	NA	False	NA	NA	False	NA	NA	NA	34883209	34887420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_34883200_34887400
ES.17714.1	chr19	+	5618	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-35	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.5072624775909	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899725	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.10	chr19	+	7731	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-8	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	74.6317552311942	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899752	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.101	chr19	+	5943	27	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	7292	8	-45	2	intron_retention	FALSE	canonical	3	170	junction_11	52.8007446827528	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGTACTTTATAAGGCT	NA	False	NA	5	True	AATAAA	-16	NA	34907083	34953137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827
ES.17714.104	chr19	+	4720	27	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	1931	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	84.0803451341027	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	952	False	NA	-1	True	AATAAA	-10	NA	34909102	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34909140_34911813_34911851_34912307_34912405_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.105	chr19	+	7323	24	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-1274	0	intron_retention	FALSE	canonical	3	30	junction_14	76.3836451580903	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCGGTGTACTTTATAAG	3661	False	NA	2	True	AATAAA	-13	NA	34911811	34953134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34950410_34951827_34951971_34952892
ES.17714.106	chr19	+	3976	21	NNC	ENSMUSG00000024795.12	novel	788	7	NA	NA	2447	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	87.7322489168037	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	7382	False	NA	-1	True	AATAAA	-10	NA	34915532	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34915571_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.107	chr19	+	4062	20	ISM	ENSMUSG00000024795.12	ENSMUST00000224728.2	4352	24	2447	8	2447	0	3prime_fragment	FALSE	canonical	3	170	junction_3	58.9614174987559	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	7382	False	NA	3	True	AATAAA	-14	NA	34915532	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.108	chr19	+	4081	21	NNC	ENSMUSG00000024795.12	novel	788	7	NA	NA	2450	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	110.177765452019	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	7385	False	NA	-1	True	AATAAA	-10	NA	34915535	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34915571_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.109	chr19	+	6199	17	NNC	ENSMUSG00000024795.12	novel	4352	24	NA	NA	2739	4	intron_retention	FALSE	canonical	0	0	junction_12	113.797448894955	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTGTATATAATTTTAA	7674	False	NA	-39	True	ATTAAA	-19	NA	34915824	34953093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34943446_34943624_34945515_34945627_34947319_34950410_34951827_34951971_34952892
ES.17714.111	chr19	+	3577	19	NNC	ENSMUSG00000024795.12	novel	4352	24	NA	NA	4100	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	114.000121832294	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	9035	False	NA	-1	True	AATAAA	-10	NA	34917185	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930294_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936921_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.115	chr19	+	2326	13	NIC	ENSMUSG00000024795.12	novel	4352	24	NA	NA	-2549	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	103.726269039665	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATACCGGTGTACTTTA	5329	False	NA	-2	True	AATAAA	-9	NA	34927742	34953130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.116	chr19	+	4149	5	NIC	ENSMUSG00000024795.12	novel	4352	24	NA	NA	-4405	4	intron_retention	FALSE	canonical	3	341	junction_4	24.6513184231594	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	4821	False	NA	17	True	AATAAA	-28	NA	34943075	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34943624_34945515_34945627_34947319_34950410_34951827_34951971_34952892
ES.17714.13	chr19	+	5291	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	84.1752734873292	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899757	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.17	chr19	+	8030	30	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_3	97.5159001029546	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899758	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906352_34906426_34906544_34907083_34907223_34909009_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34950410_34951827_34951971_34952892
ES.17714.19	chr19	+	5344	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.899503654106	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899758	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936817_34936972_34943446_34943624_34945515_34945627_34947421_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.2	chr19	+	5502	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-35	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.3937691101489	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTAAACTTTTTCTTTA	NA	False	NA	22	True	AATAAA	-33	NA	34899725	34953154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.20	chr19	+	5239	30	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	84.533862094819	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGGCTCTTAAACTTT	NA	False	NA	15	True	AATAAA	-26	NA	34899758	34953147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.21	chr19	+	5298	32	FSM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	-33	158	-2	-102	multi-exon	FALSE	canonical	3	103	junction_1	62.1311593110583	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTGTAAAGTTTATAT	NA	False	NA	NA	False	AATAAA	-17	NA	34899758	34952987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.22	chr19	+	5450	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	87.5656515611763	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899758	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.23	chr19	+	5335	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4078805374549	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899758	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912403_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.24	chr19	+	5314	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	86.1917758386624	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899758	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912337_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.25	chr19	+	5497	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	84.6582405316006	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899758	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.28	chr19	+	5441	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.0382933917572	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCGGTGTACTTTATAAG	NA	False	NA	2	True	AATAAA	-13	NA	34899760	34953134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908960_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.29	chr19	+	5661	29	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	110.666596872161	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899760	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34909009_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34927140_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.3	chr19	+	5487	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	79.0200780607851	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899735	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917650_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.30	chr19	+	8083	30	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	73.893550713839	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899760	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34950410_34951827_34951971_34952892
ES.17714.31	chr19	+	2400	17	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	5663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4684884263428	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGTACTTCTTTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	34899760	34920005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907
ES.17714.32	chr19	+	5570	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.6289297489224	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	34899760	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.33	chr19	+	5328	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	82.9706507681414	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899760	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.34	chr19	+	5324	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	98.1483004890502	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899760	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925105_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.37	chr19	+	5425	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	92.1768760743734	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899767	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945631_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.38	chr19	+	4339	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	82.2133338216163	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899767	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34927279_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.42	chr19	+	5188	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.1332623838717	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899774	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912405_34913033_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.47	chr19	+	5458	33	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.066650159011	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGTGTACTTTATAAGGC	NA	False	NA	4	True	AATAAA	-15	NA	34899786	34953136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924245_34924281_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.49	chr19	+	5611	30	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-4	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	108.020201131809	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899787	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912405_34913025_34913138_34914176_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918846_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.5	chr19	+	5499	31	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-22	5	combination_of_known_junctions	FALSE	canonical	3	97	junction_15	72.6510763092254	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899738	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.51	chr19	+	5356	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	83.5782800067631	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTCTTAAACTTTT	NA	False	NA	16	True	AATAAA	-27	NA	34899789	34953148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.54	chr19	+	2488	19	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-1	12957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.5299687383059	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAGGAAAAAGCAGAA	NA	False	NA	NA	False	AAAAAG	-36	NA	34899790	34927299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140
ES.17714.57	chr19	+	5168	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-1	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.6026646424209	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTGTAAAGTTTATAT	NA	False	NA	NA	False	AATAAA	-17	NA	34899790	34952987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.59	chr19	+	5509	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	97.996687068384	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGGCTCTTAAAC	NA	False	NA	12	True	AATAAA	-23	NA	34899791	34953144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925105_34927140_34928375_34928890_34929018_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.6	chr19	+	5430	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	88.6411241404851	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899738	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.60	chr19	+	5359	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.7303583087521	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899792	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34909009_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.61	chr19	+	5447	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9214110066954	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATACCGGTGTACTTTA	NA	False	NA	-2	True	AATAAA	-9	NA	34899796	34953130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952870
ES.17714.62	chr19	+	5620	33	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.402372359595	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTACTTTATAAGGCTCT	NA	False	NA	7	True	AATAAA	-18	NA	34899798	34953139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34948247_34948334_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.63	chr19	+	5657	32	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	77.4727772671265	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	34899799	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899952_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.65	chr19	+	2665	5	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	8	43783	8	277	intron_retention	FALSE	canonical	3	103	junction_1	99.2408685975692	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATACAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34899799	34909362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083
ES.17714.66	chr19	+	5249	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	85.4769364604667	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGTGTACTTTATAAGGC	NA	False	NA	4	True	AATAAA	-15	NA	34899799	34953136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34909009_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.68	chr19	+	5250	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.472173154288	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGTGTACTTTATAAGGC	NA	False	NA	4	True	AATAAA	-15	NA	34899802	34953136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912405_34913025_34913138_34914176_34914249_34914366_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.69	chr19	+	5448	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.0521799832856	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTCTTAAACTTTT	NA	False	NA	16	True	AATAAA	-27	NA	34899802	34953148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927111_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.71	chr19	+	5126	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	98.3174902491357	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCGGTGTACTTTATAAG	NA	False	NA	2	True	AATAAA	-13	NA	34899802	34953134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912405_34913025_34913138_34914176_34914249_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.72	chr19	+	5518	32	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.197483244838	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899802	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899952_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.73	chr19	+	7497	29	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	95.2614554684064	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899802	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34927140_34929030_34930270_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.76	chr19	+	5607	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	77.9657759675502	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGTACTTTATAAGGCT	NA	False	NA	5	True	AATAAA	-16	NA	34899802	34953137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34900139_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.78	chr19	+	5333	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	80.1106934497187	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899802	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.8	chr19	+	5377	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-20	5	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	66.7043226985078	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899740	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.81	chr19	+	5897	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.3148944985873	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899804	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.82	chr19	+	5414	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	76.4585871930391	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899804	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899952_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.83	chr19	+	5403	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	82.2133338216163	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	34899805	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928900_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.84	chr19	+	5554	33	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.51630491506	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899805	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34941928_34942082_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.85	chr19	+	5463	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	87.7900721846927	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCTTAAACTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	34899805	34953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899952_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.86	chr19	+	5258	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	15	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	83.01987044611	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGTACTTTATAAGGCT	NA	False	NA	5	True	AATAAA	-16	NA	34899806	34953137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.87	chr19	+	5525	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	92.9420906921198	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899809	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34900139_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.9	chr19	+	9756	30	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.7227246900345	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899746	34953135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.90	chr19	+	5812	32	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	78.9024608936099	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACCGGTGTACTTTAT	NA	False	NA	-1	True	AATAAA	-10	NA	34899813	34953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34900139_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.91	chr19	+	5306	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.18093402119	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATACCGGTGTACTTTA	NA	False	NA	-2	True	AATAAA	-9	NA	34899813	34953130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34899834_34902020_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34909009_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914366_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.94	chr19	+	5730	31	NNC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	98.2634158213976	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCGGTGTACTTTATAA	NA	False	NA	1	True	AATAAA	-12	NA	34899818	34953133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34900139_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943647_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.96	chr19	+	5534	31	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	81.6129687406767	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	34899820	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_34899952_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
ES.17714.97	chr19	+	5703	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	73.7418931504408	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCTCTTAAACTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	34899820	34953149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34900139_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ES.17714.98	chr19	+	5274	30	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	2187	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	73.893550713839	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCGGTGTACTTTATA	NA	False	NA	0	True	AATAAA	-11	NA	34902020	34953132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947522_34950258_34950410_34951827_34951971_34952892
ES.17715.1	chr19	-	178	1	Intergenic	novelGene_14702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTCTAAGA	NA	False	NA	NA	False	NA	NA	NA	34900849	34900671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34900700_34900800
ES.17716.1	chr19	-	2137	1	Intergenic	novelGene_14703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACACCCAAACCAGTCT	NA	False	NA	NA	False	AATAAA	-25	NA	34923936	34921799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34921800_34923900
ES.17717.1	chr19	-	206	1	Intergenic	novelGene_14704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAAATCTCACAAGC	NA	False	NA	NA	False	AAAAAG	-4	NA	34959559	34959353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_34959400_34959600
ES.17718.1	chr19	+	261	1	Intergenic	novelGene_14705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTCAAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	35852365	35852626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_35852400_35852600
ES.17719.1	chr19	+	177	1	Intergenic	novelGene_14706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAACAATAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	35926732	35926909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_35926700_35926900
ES.1772.1	chr1	+	216	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGATGCCCCAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	164359080	164359296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164359100_164359300
ES.17720.1	chr19	+	7101	8	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-25	135	intron_retention	FALSE	canonical	3	930	junction_4	80.749044348929	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGACTAACAGCT	NA	False	NA	18	True	AATAAA	-14	NA	36061090	36082013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36071866_36077571_36078672_36079220_36079301_36081735
ES.17720.11	chr19	+	936	11	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	3	72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	313.56863682454	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTCTATAAAAACAACTT	NA	False	NA	-45	True	AATAAA	-39	NA	36061118	36081950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077565_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.13	chr19	+	6237	7	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	4	-9	intron_retention	FALSE	canonical	3	991	junction_3	49.9622079398241	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	36061119	36082168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36066611_36071775_36071866_36077571_36078672_36079220
ES.17720.14	chr19	+	1143	11	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	315.316602797886	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGGATTTTTAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	36061119	36082171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071782_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.17	chr19	+	1266	11	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	317.610846792108	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGGATTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	36061120	36082172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078355_36078633_36078672_36079220_36079301_36081735
ES.17720.18	chr19	+	1086	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	137	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	396.75736918172	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGACTAACAGCTTA	NA	False	NA	20	True	AATAAA	-16	NA	36061120	36082015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061361_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.19	chr19	+	1203	10	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	419.846268161203	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGTACATATGGATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	36061120	36082165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078355_36078633_36078672_36079220_36079301_36081735
ES.17720.2	chr19	+	1028	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-37	154	-22	145	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACAGCTTAATTAATTT	NA	False	NA	28	True	AATAAA	-24	NA	36061093	36082023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.20	chr19	+	1289	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	-8	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	308.862186096	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATATGGATTTTTAAA	NA	False	NA	NA	False	AATAAA	-18	NA	36061120	36082169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061361_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.21	chr19	+	1101	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGGATTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	36061120	36082172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.22	chr19	+	2047	12	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-7	1024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	302.893129558734	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACTGTTCGTTGGATAC	NA	False	NA	NA	False	NA	NA	NA	36061123	36083201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735_36082491_36082619
ES.17720.23	chr19	+	3320	4	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-7402	-9	intron_retention	FALSE	canonical	3	930	junction_3	66.6933280021323	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTACATATGGATTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	36070158	36082168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36071866_36077571_36078672_36079220_36079301_36081735
ES.17720.24	chr19	+	2856	2	ISM	ENSMUSG00000024800.9	ENSMUST00000235223.2	370	5	1028	-115	1028	115	intron_retention	FALSE	canonical	3	1050	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACCCAGTGAAGCA	NA	False	NA	-2	True	ATTAAA	-6	NA	36078588	36081993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36078672_36079220
ES.17720.3	chr19	+	1165	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	-25	5	-10	-5	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGGATTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	36061105	36082172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.5	chr19	+	1001	11	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-7	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	317.67595124592	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTAACAGCTTAATTA	NA	False	NA	24	True	AATAAA	-20	NA	36061108	36082019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064791_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.6	chr19	+	2037	9	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	-6	-1785	intron_retention	FALSE	canonical	3	930	junction_4	72.0134536041704	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAACGTCGATGGGCAG	NA	False	NA	NA	False	AGTAAA	-13	NA	36061109	36080093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36078239_36078633_36078672_36079220
ES.17720.8	chr19	+	954	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	1	143	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACAGCTTAATTAAT	NA	False	NA	26	True	AATAAA	-22	NA	36061116	36082021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ES.17720.9	chr19	+	1143	10	NNC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	333.766311387599	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGGATTTTTAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	36061116	36082171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077709_36078633_36078672_36079220_36079301_36081735
ES.17721.1	chr19	-	183	1	Intergenic	novelGene_14707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTCAAAAAAAGAGAAA	8234	False	NA	NA	False	NA	NA	NA	36106065	36105882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36105900_36106100
ES.17722.1	chr19	-	157	1	Intergenic	novelGene_14708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATAAGTC	7712	False	NA	NA	False	NA	NA	NA	36112388	36112231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36112200_36112400
ES.17723.1	chr19	+	6445	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	-2	0	-2	0	multi-exon	FALSE	canonical	3	10	junction_1	36.9382931386928	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGCCTGTTAATGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	36325706	36438370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.10	chr19	+	1690	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-82	18	-82	-18	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36387065	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.11	chr19	+	1843	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-29	-248	-29	236	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACTGTCTTAGGCAAGT	NA	False	NA	NA	False	AATAAA	-26	NA	36387118	36433840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.12	chr19	+	6371	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-28	-4777	-28	-1	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGGCCTGTTAATGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	36387119	36438369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.14	chr19	+	1600	10	NNC	ENSMUSG00000024805.17	novel	1626	10	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	47.6859582821185	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36387149	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36422621_36422676_36433020
ES.17723.15	chr19	+	1833	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	36	-243	36	231	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTACTGTCTTAGG	NA	False	NA	NA	False	AATAAA	-21	NA	36387183	36433835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.16	chr19	+	3436	9	ISM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	218	18	218	-18	3prime_fragment	FALSE	canonical	3	44	junction_7	29.9989583152482	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36387365	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.17	chr19	+	1705	10	NNC	ENSMUSG00000024805.17	novel	430	5	NA	NA	304	-18	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	40.2780459761186	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36387451	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36387711_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.18	chr19	+	4158	1	NIC	ENSMUSG00000024805.17	novel	1266	10	NA	NA	9844	-2045	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-16	NA	36426897	36431055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36426900_36431100
ES.17723.19	chr19	+	5873	1	NIC	ENSMUSG00000024805.17	novel	6443	9	NA	NA	10648	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36427701	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36427700_36433600
ES.17723.2	chr19	+	1627	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	20	4796	20	-18	multi-exon	FALSE	canonical	3	10	junction_1	36.9382931386928	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36325728	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.3	chr19	+	1943	10	NIC	ENSMUSG00000024805.17	novel	6443	9	NA	NA	21	227	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.9580337679114	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACATTTGTTACTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	36325729	36433831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.4	chr19	+	6469	10	NIC	ENSMUSG00000024805.17	novel	6443	9	NA	NA	28	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	38.9580337679114	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTGGCCTGTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	36325736	36438364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17723.6	chr19	+	1445	9	NNC	ENSMUSG00000024805.17	novel	430	5	NA	NA	-125	-18	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	39.2037944592102	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	False	NA	-24	True	NA	NA	NA	36387022	36433574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36387082_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.7	chr19	+	1688	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	-113	-9	-113	-3	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAATGCCAGCTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	36387034	36433601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ES.17723.9	chr19	+	6493	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	-89	-4778	-89	0	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGCCTGTTAATGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	36387058	36438370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ES.17724.1	chr19	-	5712	2	Antisense	novelGene_ENSMUSG00000024805.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATTTCTTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	36397742	36391825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_36394187_36394391
ES.17725.1	chr19	+	212	1	Intergenic	novelGene_14709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTTATGATATACATAT	NA	False	NA	NA	False	NA	NA	NA	36446781	36446993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36446800_36447000
ES.17726.1	chr19	+	158	1	Intergenic	novelGene_14710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	36456525	36456683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36456500_36456700
ES.17727.1	chr19	-	1958	1	Intergenic	novelGene_14711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	36525245	36523287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36523300_36525200
ES.17728.1	chr19	+	4648	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	-62	-744	-33	-146	multi-exon	FALSE	canonical	3	14	junction_10	5.91840350094516	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATAAAATGTCTTGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	36532005	36598386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.10	chr19	+	4757	21	NNC	ENSMUSG00000041180.14	novel	4731	21	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	8.63075894692929	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGCTTCAGTTCATTT	NA	False	NA	5	True	ATTAAA	-12	NA	36532051	36598528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596107
ES.17728.11	chr19	+	6326	19	NIC	ENSMUSG00000041180.14	novel	4731	21	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	3	junction_7	7.60035736651675	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	3	True	ATTAAA	-10	NA	36532066	36598526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36576286_36576436_36576995_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.12	chr19	+	4603	20	NIC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	7.93777741243149	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	36532083	36598529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.13	chr19	+	1086	8	FSM	ENSMUSG00000041180.14	ENSMUST00000141503.2	1116	8	33	-3	33	3	multi-exon	FALSE	canonical	3	18	junction_3	5.28378343111627	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTAAGCATGTTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	36532110	36574784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476
ES.17728.15	chr19	+	4399	19	NIC	ENSMUSG00000041180.14	novel	4731	21	NA	NA	76	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	11.3066133821246	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGCTTCAGTTCATTT	NA	False	NA	5	True	ATTAAA	-12	NA	36532153	36598528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586655_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.16	chr19	+	6137	16	NNC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	7309	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	8.98640949186913	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	3	True	ATTAAA	-10	NA	36570197	36598526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123_36597143_36597367
ES.17728.17	chr19	+	190	1	Intergenic	novelGene_14712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	36573077	36573267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36573100_36573300
ES.17728.18	chr19	+	4604	7	NNC	ENSMUSG00000041180.14	novel	1679	16	NA	NA	2584	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.6856987619721	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	3	True	ATTAAA	-10	NA	36585150	36598526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36586824_36588763_36588839_36589543_36589632_36589718_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.2	chr19	+	4774	21	FSM	ENSMUSG00000041180.14	ENSMUST00000047247.12	4731	21	-48	5	-18	-2	multi-exon	FALSE	canonical	3	10	junction_10	6.40683229060977	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTTCAGTTCATTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	36532020	36598530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.4	chr19	+	4618	20	NIC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	7.76525395431915	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	3	True	ATTAAA	-10	NA	36532036	36598526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.5	chr19	+	4691	21	NNC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	8.29095893126965	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGCTTCAGTTCATTT	NA	False	NA	5	True	ATTAAA	-12	NA	36532036	36598528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592967_36593044_36596123
ES.17728.6	chr19	+	4600	19	NIC	ENSMUSG00000041180.14	novel	3842	21	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	8.64402312597954	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGGCTTCAGTTCAT	NA	False	NA	3	True	ATTAAA	-10	NA	36532037	36598526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.7	chr19	+	4663	20	NIC	ENSMUSG00000041180.14	novel	4731	21	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	8.12642486973422	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTTCATTTTTTTA	NA	False	NA	10	True	ATTAAA	-17	NA	36532037	36598533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17728.9	chr19	+	4495	19	NIC	ENSMUSG00000041180.14	novel	4731	21	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	9.81636954841815	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCTTCAGTTCATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	36532049	36598529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36532316_36546772_36546903_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ES.17729.1	chr19	-	2781	2	NNC	ENSMUSG00000067279.4	novel	2725	2	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCCGAGAATGTTTT	NA	False	NA	-5	True	AATAAA	-11	NA	36714061	36709136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_36711800_36713943
ES.17729.2	chr19	-	2768	2	FSM	ENSMUSG00000067279.4	ENSMUST00000087321.4	2725	2	-49	6	-49	-6	multi-exon	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCCGAGAATGTTTT	NA	False	NA	-5	True	AATAAA	-11	NA	36714102	36709136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_36711755_36713952
ES.17729.3	chr19	-	2814	2	NNC	ENSMUSG00000067279.4	novel	2725	2	NA	NA	-47	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCCGAGAATGTTTT	NA	False	NA	-5	True	AATAAA	-11	NA	36714100	36709136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_36711759_36713908
ES.1773.1	chr1	-	155	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTAAATACATT	NA	False	NA	NA	False	AAAACA	-11	NA	164620374	164620219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_164620200_164620400
ES.17730.1	chr19	+	6539	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-55	-3	-55	3	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGATTGTGCCTTTA	NA	False	NA	19	True	AATAAA	-25	NA	36811576	36870880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.10	chr19	+	5945	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	222.615451065856	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGTTCTCTTGATTGT	NA	False	NA	12	True	AATAAA	-18	NA	36811603	36870873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36869220_36869590
ES.17730.100	chr19	+	5851	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	57	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	192.14357997457	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811688	36870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853566_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.101	chr19	+	3978	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	57	-2419	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	192.939163235615	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACGTCGTGCA	NA	False	NA	NA	False	TATAAA	-12	NA	36811688	36868458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.102	chr19	+	6407	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	61	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	194.091785765846	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATAGTTCTCTTGAT	NA	False	NA	9	True	AATAAA	-15	NA	36811692	36870870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862888_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.103	chr19	+	4012	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	61	-2219	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTCACAGAGTATTTTC	NA	False	NA	NA	False	TATAAA	-17	NA	36811692	36868658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.106	chr19	+	1524	8	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	69	35183	69	2357	5prime_fragment	FALSE	canonical	3	815	junction_1	16.7624458787116	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	36811700	36835694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202
ES.17730.108	chr19	+	6246	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	100	135	-72	-135	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCTTTTAAGATGATA	NA	False	NA	NA	False	CATAAA	-14	NA	36811731	36870742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.109	chr19	+	5645	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	80	-590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	194.081008524334	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811883	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835396_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.11	chr19	+	5896	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-28	-590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	251.044059524389	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811603	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839582_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.110	chr19	+	5493	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	281	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	248.797144739985	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36812084	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839800_36843351_36843524_36845011_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.111	chr19	+	6040	1	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-6965	-6567	mono-exon	FALSE	NA	NA	NA	NA	NA	980	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTAGGTTTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	36819805	36825845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36819800_36825800
ES.17730.113	chr19	+	5762	25	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	201.241972752262	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTCTCTTGATTGTG	NA	False	NA	13	True	AATAAA	-19	NA	36826737	36870874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843587_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.114	chr19	+	4945	22	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	18568	599	3429	-599	3prime_fragment	FALSE	canonical	3	663	junction_12	112.040080291995	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTAGCATGGTAA	NA	False	NA	23	True	AATAAA	-12	NA	36830199	36870278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.115	chr19	+	4945	17	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	3430	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	240.479135984289	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATAGTTCTCTTGAT	NA	False	NA	9	True	AATAAA	-15	NA	36830200	36870870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853813_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.116	chr19	+	5380	20	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	23569	2	-80	-2	3prime_fragment	FALSE	canonical	3	663	junction_10	116.811850042063	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTCTCTTGATTGTGC	894	False	NA	14	True	AATAAA	-20	NA	36835200	36870875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.117	chr19	+	4474	18	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	27853	598	2991	-598	3prime_fragment	FALSE	canonical	3	663	junction_8	117.913697840447	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	5178	False	NA	24	True	AATAAA	-13	NA	36839484	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.118	chr19	+	4295	17	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	2991	-588	combination_of_known_junctions	FALSE	canonical	3	243	junction_8	187.397972240897	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	5178	False	NA	34	True	AATAAA	-23	NA	36839484	36870289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.119	chr19	+	4794	16	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	3246	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	289.527630613883	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATAGTTCTCTTGATT	5433	False	NA	10	True	AATAAA	-16	NA	36839739	36870871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36839766_36843351_36843587_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.12	chr19	+	6909	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-28	-596	intron_retention	FALSE	canonical	3	663	junction_17	103.622391402631	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTAGCATGGTAATTC	NA	False	NA	26	True	AATAAA	-15	NA	36811603	36870281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36867449_36868140
ES.17730.120	chr19	+	5001	15	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	5978	-590	combination_of_known_junctions	FALSE	canonical	3	243	junction_6	195.599966612409	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	8165	False	NA	32	True	AATAAA	-21	NA	36842471	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.121	chr19	+	6317	1	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	6055	-998	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1090	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	8242	False	NA	NA	False	NA	NA	NA	36842548	36848865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36842500_36848900
ES.17730.122	chr19	+	4712	15	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-5802	-2	combination_of_known_junctions	FALSE	canonical	3	243	junction_6	195.599966612409	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTCTCTTGATTGTGC	9042	False	NA	14	True	AATAAA	-20	NA	36843348	36870875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.123	chr19	+	4313	16	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	31717	590	-5802	-590	3prime_fragment	FALSE	canonical	3	663	junction_6	118.779234997817	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	9042	False	NA	32	True	AATAAA	-21	NA	36843348	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.124	chr19	+	3951	14	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-11	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	269.157264691285	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36849139	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36849159_36849822_36849989_36851196_36851417_36852636_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.125	chr19	+	3717	12	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	671	-597	combination_of_known_junctions	FALSE	canonical	3	243	junction_3	220.526380049011	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36849821	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.126	chr19	+	3630	12	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	708	-601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	332.412891715277	1310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGGTAGCATGGT	NA	False	NA	21	True	AATAAA	-10	NA	36849858	36870276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867337_36867449_36868140
ES.17730.127	chr19	+	4037	11	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-3175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	389.449662986117	1311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGATTGTGCCT	NA	False	NA	16	True	AATAAA	-22	NA	36852731	36870877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36852767_36853584_36853774_36856638_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.128	chr19	+	3351	10	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-2322	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	312.886008509469	1308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36853584	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864523_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.129	chr19	+	3920	10	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-2272	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	316.694033905142	1310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTCTCTTGATTGTG	NA	False	NA	13	True	AATAAA	-19	NA	36853634	36870874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861498_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.13	chr19	+	6456	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	252.42789116238	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTCTCTTGATTGTG	NA	False	NA	13	True	AATAAA	-19	NA	36811603	36870874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826793_36829803_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36870329_36870423
ES.17730.130	chr19	+	6153	10	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-2268	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.291768082155	1310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGTTCTCTTGATTGT	NA	False	NA	12	True	AATAAA	-18	NA	36853638	36870873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36853774_36854419_36856888_36857909_36857993_36859086_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.131	chr19	+	3405	6	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	49783	6	3442	-6	3prime_fragment	FALSE	canonical	3	888	junction_4	102.300342130415	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATAGTTCTCTTGATT	NA	False	NA	10	True	AATAAA	-16	NA	36861414	36870871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.132	chr19	+	3262	5	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	51249	2	4908	-2	3prime_fragment	FALSE	canonical	3	888	junction_3	109.879479430875	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTCTCTTGATTGTGC	NA	False	NA	14	True	AATAAA	-20	NA	36862880	36870875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.133	chr19	+	2233	3	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	9325	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	592.5	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36867297	36870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36867449_36868140_36868790_36868853
ES.17730.134	chr19	+	172	1	Intergenic	novelGene_14718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGCTAGGTGTT	4852	False	NA	NA	False	NA	NA	NA	36884121	36884293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36884100_36884300
ES.17730.15	chr19	+	5770	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-26	-599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	195.072968444507	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTAGCATGGTAA	NA	False	NA	23	True	AATAAA	-12	NA	36811605	36870278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856803_36857962_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.16	chr19	+	5973	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-26	-597	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	193.437041574913	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811605	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843587_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.17	chr19	+	4964	19	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-26	-598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	228.98499196063	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811605	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36849063_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.18	chr19	+	5919	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-25	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.10099417736	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811606	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826795_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.19	chr19	+	5836	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-14	-599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	192.79367823366	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTAGCATGGTAA	NA	False	NA	23	True	AATAAA	-12	NA	36811617	36870278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866168_36866296_36867291_36867449_36868140
ES.17730.2	chr19	+	5967	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-32	546	-32	-546	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGTGTAGTTTTGAGT	NA	False	NA	76	True	AGTAAA	-14	NA	36811599	36870331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.20	chr19	+	5541	24	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-10	-590	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	225.734926603853	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811621	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.21	chr19	+	7044	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-10	-592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	224.613673671039	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCATGGTAATTCATTG	NA	False	NA	30	True	AATAAA	-19	NA	36811621	36870285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864629_36864831_36866296_36867291_36867449_36868140
ES.17730.22	chr19	+	5803	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	-597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	191.485536170266	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811623	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866134_36866222_36866296_36867291_36867449_36868140
ES.17730.23	chr19	+	4880	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-8	1609	-8	-1609	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGAGTGTCTGTGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	36811623	36869268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.24	chr19	+	5573	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	-598	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	226.718270988467	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811623	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856759_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.25	chr19	+	5882	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	-593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	193.402839389766	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAGCATGGTAATTCATT	NA	False	NA	29	True	AATAAA	-18	NA	36811623	36870284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864479_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.26	chr19	+	5815	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	-590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	191.485536170266	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811623	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36869140_36869223
ES.17730.27	chr19	+	6440	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_19	194.579777831172	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGATTGTGCCT	NA	False	NA	16	True	AATAAA	-22	NA	36811623	36870877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856839_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.29	chr19	+	5853	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-7	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	194.826291920954	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGGTAATTCATTGAAA	NA	False	NA	33	True	AATAAA	-22	NA	36811624	36870288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867337_36867449_36868140
ES.17730.30	chr19	+	6453	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	192.939163235615	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATAGTTCTCTTGAT	NA	False	NA	9	True	AATAAA	-15	NA	36811625	36870870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.31	chr19	+	5800	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-5	-590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	194.826291920954	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811626	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866192_36867283_36867449_36868140
ES.17730.32	chr19	+	5646	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-4	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	226.11028813391	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGGTAATTCATTGAAA	NA	False	NA	33	True	AATAAA	-22	NA	36811627	36870288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851257_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.33	chr19	+	5758	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-4	727	-4	-727	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGATTTTTTTTTGA	NA	False	NA	20	True	NA	NA	NA	36811627	36870150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.34	chr19	+	6279	25	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	250.579037763869	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATAGTTCTCTTGAT	NA	False	NA	9	True	AATAAA	-15	NA	36811628	36870870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862952_36864486_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.35	chr19	+	5397	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	-3	1087	-3	-1087	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCTAAAATCATTTC	NA	False	NA	NA	False	NA	NA	NA	36811628	36869790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.4	chr19	+	5777	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-32	-547	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAGTGTAGTTTTGAG	NA	False	NA	75	True	AGTAAA	-13	NA	36811599	36870330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.40	chr19	+	3196	9	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	1	32514	1	-1357	5prime_fragment	FALSE	canonical	3	732	junction_8	38.0583433690958	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGATCTCTAGGTT	NA	False	NA	NA	False	AATAAA	-11	NA	36811632	36838363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454
ES.17730.41	chr19	+	5099	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	2	-588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	214.628333637477	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36811633	36870289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867464_36868758
ES.17730.42	chr19	+	5824	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	4	-597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	195.12243539096	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811635	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828915_36829911_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.44	chr19	+	5846	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	5	-598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	257.163586846972	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811636	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826793_36829875_36829954_36830206_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.45	chr19	+	5814	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	6	-592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.485536170266	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCATGGTAATTCATTG	NA	False	NA	30	True	AATAAA	-19	NA	36811637	36870285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36811812_36811880_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.47	chr19	+	5756	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	6	-590	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_19	194.744123579221	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811637	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856759_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.48	chr19	+	5288	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	7	-599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	191.485536170266	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTAGCATGGTAA	NA	False	NA	23	True	AATAAA	-12	NA	36811638	36870278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36868589_36869175
ES.17730.49	chr19	+	4060	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	8	2413	8	-2413	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACGTCGTGCATTGGTT	NA	False	NA	NA	False	TATAAA	-18	NA	36811639	36868464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.5	chr19	+	5750	25	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-29	-589	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	191.109984149616	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGGTAATTCATTGAAA	NA	False	NA	33	True	AATAAA	-22	NA	36811602	36870288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.50	chr19	+	3921	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	12	2548	12	-2548	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTTGTGACTTGATGAAG	NA	False	NA	NA	False	GATAAA	-16	NA	36811643	36868329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.51	chr19	+	3868	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	12	-2412	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTCGTGCATTGGTTC	NA	False	NA	NA	False	TATAAA	-19	NA	36811643	36868465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.52	chr19	+	5616	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	12	-596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.615451065856	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTAGCATGGTAATTC	NA	False	NA	26	True	AATAAA	-15	NA	36811643	36870281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36811813_36811880_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.53	chr19	+	6576	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	14	-597	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	276.496295816056	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811645	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851257_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866569_36866608_36867449_36868140
ES.17730.55	chr19	+	5662	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	15	-588	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_18	225.129921600839	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36811646	36870289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.56	chr19	+	4247	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	15	2219	15	-2219	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTCACAGAGTATTTTC	NA	False	NA	NA	False	TATAAA	-17	NA	36811646	36868658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.57	chr19	+	5443	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	16	-598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.615451065856	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811647	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36811810_36812044_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.58	chr19	+	5637	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	16	-590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	222.615451065856	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811647	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36868354_36868402
ES.17730.59	chr19	+	5776	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	16	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.363978447628	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811647	36870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36811815_36811885_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.6	chr19	+	5878	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-29	-599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.115214028948	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGGTAGCATGGTAA	NA	False	NA	23	True	AATAAA	-12	NA	36811602	36870278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861498_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.61	chr19	+	5749	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	16	-590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	226.9133191331	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811647	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843589_36845041_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.63	chr19	+	3297	21	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	17	-2219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	216.794712804533	1288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTCACAGAGTATTTTC	NA	False	NA	NA	False	TATAAA	-17	NA	36811648	36868658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36852748_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.68	chr19	+	5816	28	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	21	14064	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	246.828975628625	1346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTATATATTTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	36811652	36884941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851257_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140_36870278_36884924
ES.17730.69	chr19	+	5868	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	22	-591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	192.14357997457	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811653	36870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852767_36853577_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.7	chr19	+	5883	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-29	-597	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	194.305138085411	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811602	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851387_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.70	chr19	+	7066	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	26	-597	intron_retention	FALSE	canonical	3	663	junction_16	103.079185095731	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811657	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.71	chr19	+	2536	17	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	26	18017	26	2997	5prime_fragment	FALSE	canonical	3	732	junction_8	57.5320223332189	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACGTTTTAGTTCTTAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	36811657	36852860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663
ES.17730.72	chr19	+	6874	25	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	29	-597	intron_retention	FALSE	canonical	3	243	junction_16	155.5545634889	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811660	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.73	chr19	+	5889	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	29	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	195.07551640478	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811660	36870286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845011_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.74	chr19	+	5813	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	32	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	195.097259920283	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811663	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836538_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.75	chr19	+	6242	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_19	223.862114704565	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAATAGTTCTCTTGAT	NA	False	NA	9	True	AATAAA	-15	NA	36811664	36870870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859086_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.76	chr19	+	3974	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	35	-2412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	192.79367823366	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTCGTGCATTGGTTC	NA	False	NA	NA	False	TATAAA	-19	NA	36811666	36868465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866168_36866296_36867291_36867449_36868140
ES.17730.78	chr19	+	8123	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	36	-590	intron_retention	FALSE	canonical	3	663	junction_17	103.313240196985	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811667	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.79	chr19	+	6270	25	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	36	-4	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	191.109984149616	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGTTCTCTTGATTGT	NA	False	NA	12	True	AATAAA	-18	NA	36811667	36870873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.8	chr19	+	3230	1	Genic_Genomic	ENSMUSG00000024811.12	novel	NA	NA	NA	NA	-28	-17579	mono-exon	FALSE	NA	NA	NA	NA	NA	963	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGCAGTGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	36811603	36814833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_36811600_36814800
ES.17730.80	chr19	+	5847	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	40	-590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	198.955166809007	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGGTAATTCATTGAA	NA	False	NA	32	True	AATAAA	-21	NA	36811671	36870287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826793_36829852_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.81	chr19	+	5646	25	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	40	-597	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	251.280798969113	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811671	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.83	chr19	+	3227	12	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	40	1844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	239.2523823901	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGGCATCCTCATTT	NA	False	NA	NA	False	NA	NA	NA	36811671	36841564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36839878
ES.17730.84	chr19	+	5774	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	40	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	195.120232998641	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36811671	36870289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832337_36835260_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.85	chr19	+	5609	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	43	-592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	225.87665306534	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCATGGTAATTCATTG	NA	False	NA	30	True	AATAAA	-19	NA	36811674	36870285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861516_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.87	chr19	+	5531	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	43	-718	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTGAGGTGAAATT	NA	False	NA	29	True	NA	NA	NA	36811674	36870159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.88	chr19	+	3927	12	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	45	25135	45	2039	intron_retention	FALSE	canonical	3	732	junction_8	64.3036443577341	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTGCCTGTGGAGCC	NA	False	NA	NA	False	NA	NA	NA	36811676	36845742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351
ES.17730.89	chr19	+	5832	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	46	-597	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_19	193.430801197925	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811677	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857915_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.9	chr19	+	6322	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	-28	2	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGATTGTGCCTTT	NA	False	NA	18	True	AATAAA	-24	NA	36811603	36870879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.90	chr19	+	6217	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	46	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	275.651374021607	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAGTTCTCTTGATTGT	NA	False	NA	12	True	AATAAA	-18	NA	36811677	36870873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845054_36845120_36849012_36849159_36849822_36849989_36851206_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.93	chr19	+	8047	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	52	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	193.307263766399	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811683	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36854419_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.94	chr19	+	6228	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	214.628333637477	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTCTCTTGATTGTGC	NA	False	NA	14	True	AATAAA	-20	NA	36811687	36870875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868146
ES.17730.95	chr19	+	5830	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	56	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	192.14357997457	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGGTAATTCATTGAAAT	NA	False	NA	34	True	AATAAA	-23	NA	36811687	36870289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853591_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.96	chr19	+	6121	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	56	304	56	-304	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTTAGTCATATTTTT	NA	False	NA	NA	False	CATAAA	-24	NA	36811687	36870573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.97	chr19	+	5664	25	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	57	-598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	202.995993221268	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGTAGCATGGTAAT	NA	False	NA	24	True	AATAAA	-13	NA	36811688	36870279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36829906_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.98	chr19	+	6357	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	57	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	194.325597567131	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATAGTTCTCTTGATT	NA	False	NA	10	True	AATAAA	-16	NA	36811688	36870871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851257_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17730.99	chr19	+	5811	27	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	57	-597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	195.104523648041	1335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGCATGGTAATT	NA	False	NA	25	True	AATAAA	-14	NA	36811688	36870280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849028_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ES.17731.1	chr19	-	158	2	Antisense	novelGene_ENSMUSG00000117938.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	119	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGTAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	36864825	36790634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_36790668_36864700
ES.17731.2	chr19	-	218	1	Intergenic	novelGene_14713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTGATGGGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	36808132	36807914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36807900_36808100
ES.17731.3	chr19	-	178	1	Intergenic	novelGene_14714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36833147	36832969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36833000_36833100
ES.17731.4	chr19	-	206	1	Intergenic	novelGene_14715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGAGAGCTTTGAG	NA	False	NA	NA	False	AAAAAG	-6	NA	36842007	36841801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36841800_36842000
ES.17731.5	chr19	-	205	1	Antisense	novelGene_ENSMUSG00000024811.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGGACATCAGCTACAC	NA	False	NA	NA	False	NA	NA	NA	36864827	36864622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_36864600_36864800
ES.17732.1	chr19	-	175	1	Intergenic	novelGene_14716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGGGCT	NA	False	NA	NA	False	NA	NA	NA	36875277	36875102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36875100_36875300
ES.17733.1	chr19	-	366	1	Intergenic	novelGene_14717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATGTTTACGGGACA	NA	False	NA	NA	False	AATAAA	-39	NA	36881854	36881488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36881500_36881900
ES.17734.1	chr19	+	239	1	Intergenic	novelGene_14719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTTCTCATCCTGAA	936	False	NA	NA	False	NA	NA	NA	36891738	36891977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36891700_36892000
ES.17735.1	chr19	+	207	1	Intergenic	novelGene_14720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCCTGGTTCACTTTTT	1401	False	NA	NA	False	NA	NA	NA	36892203	36892410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36892200_36892400
ES.17736.1	chr19	-	3645	1	Genic_Genomic	ENSMUSG00000047632.12	novel	NA	NA	NA	NA	494	2089	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTGGGTTAAACTTTC	NA	False	NA	NA	False	NA	NA	NA	36896505	36892860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_36892900_36896500
ES.17736.2	chr19	-	1833	2	FSM	ENSMUSG00000047632.12	ENSMUST00000057337.9	1772	2	-71	10	-71	-10	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGATGGAAATTCTGC	NA	False	NA	NA	False	ATTAAA	-36	NA	36897086	36894959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_36896678_36896971
ES.17736.3	chr19	-	1231	1	ISM	ENSMUSG00000047632.12	ENSMUST00000238948.2	1756	2	491	328	491	-328	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTTCAGTCCCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	36896508	36895277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_36895300_36896500
ES.17737.1	chr19	+	5604	36	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	18	-1231	combination_of_known_splicesites	TRUE	canonical	1	1	junction_23	27.0712740289596	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCTTAGTGCTGGCTC	NA	False	NA	4	True	TATAAA	-14	NA	36903496	36988921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.10	chr19	+	7170	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.2514229015612	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTGCAATTGTGTG	NA	False	NA	10	True	AATAAA	-12	NA	36903524	36990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939905_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958133_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.12	chr19	+	7422	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	46	4	intron_retention	FALSE	canonical	3	111	junction_9	14.3918915785895	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCAATTGTGTGTTG	NA	False	NA	13	True	AATAAA	-15	NA	36903524	36990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.13	chr19	+	7169	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	46	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.5671414004477	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTTGTTTACAGTAA	NA	False	NA	23	True	AATAAA	-25	NA	36903524	36990166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943992_36944082_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.14	chr19	+	5751	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	46	-1230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	26.6410032760697	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTTAGTGCTGGCTCT	NA	False	NA	5	True	TATAAA	-15	NA	36903524	36988922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.15	chr19	+	6897	36	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	49	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.2138020204484	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTGCAATTGTGTG	NA	False	NA	10	True	AATAAA	-12	NA	36903527	36990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.16	chr19	+	9010	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	49	4	intron_retention	FALSE	canonical	3	111	junction_8	14.4278751119808	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCAATTGTGTGTTG	NA	False	NA	13	True	AATAAA	-15	NA	36903527	36990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.17	chr19	+	6226	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	60	918	60	-918	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCAGAATTTCAGAG	NA	False	NA	NA	False	TATAAA	-16	NA	36903538	36989234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.2	chr19	+	8482	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	27	-1305	27	1305	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGAGAATGTTTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	36903505	36991457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.20	chr19	+	7068	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	62	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_28	25.8399035850359	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCAATTGTGTGTTG	NA	False	NA	13	True	AATAAA	-15	NA	36903540	36990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.21	chr19	+	7117	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	70	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	26.433620710592	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGTGCAATTGTGT	NA	False	NA	9	True	AATAAA	-11	NA	36903548	36990152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926484_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.22	chr19	+	6523	39	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	71	-732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	33.1318611250055	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAGGCTACAATAACAT	NA	False	NA	NA	False	AATAAA	-14	NA	36903549	36989420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960281_36960404_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.23	chr19	+	8560	37	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	72	-87	intron_retention	FALSE	canonical	0	0	junction_5	26.8864065658595	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGACGTTTGTCACACTT	NA	False	NA	-78	True	ATTAAA	-18	NA	36903550	36990065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933939_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.25	chr19	+	6379	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	76	-734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.5232232819685	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAAGGCTACAATAAC	NA	False	NA	NA	False	AATAAA	-12	NA	36903554	36989418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933920_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.28	chr19	+	6705	39	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	93	-554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	33.1318611250055	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGTGGTAAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	36903571	36989598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960255_36960404_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.29	chr19	+	1414	5	ISM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	95	55579	95	-8659	5prime_fragment	FALSE	canonical	3	125	junction_4	7.39509972887452	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36903573	36934573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770
ES.17737.3	chr19	+	6462	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	27	715	27	-715	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTATTAGAGGATGGGT	NA	False	NA	NA	False	AATAAA	-31	NA	36903505	36989437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.30	chr19	+	7294	39	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	95	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	38.7456458102337	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTGCAATTGTGTG	NA	False	NA	10	True	AATAAA	-12	NA	36903573	36990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960211_36960404_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987132_36987411_36987583_36988660
ES.17737.31	chr19	+	7098	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	99	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.280361758753	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCAATTGTGTGTTGT	NA	False	NA	14	True	AATAAA	-16	NA	36903577	36990157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943903_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.32	chr19	+	6965	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	102	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.8333189555977	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	36903580	36990159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.33	chr19	+	6980	37	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	117	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	26.7921814650155	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	36903595	36990159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946608_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.35	chr19	+	2049	1	Intergenic	novelGene_14722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCCCAAACCACTTGTT	NA	False	NA	NA	False	NA	NA	NA	36915848	36917897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36915800_36917900
ES.17737.36	chr19	+	5258	35	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	-9048	-1230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	27.64380456442	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTTAGTGCTGGCTCT	527	False	NA	5	True	TATAAA	-15	NA	36928536	36988922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969886_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.37	chr19	+	5661	1	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	-8672	-8659	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	903	False	NA	NA	False	NA	NA	NA	36928912	36934573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36928900_36934600
ES.17737.38	chr19	+	6198	32	ISM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	35558	1	322	-1	3prime_fragment	FALSE	canonical	3	111	junction_3	14.6666036009113	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTCTGTGCAATTGTG	9006	False	NA	8	True	AATAAA	-10	NA	36939036	36990151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.39	chr19	+	6799	26	ISM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	43833	-1303	8597	1303	3prime_fragment	FALSE	canonical	3	121	junction_10	11.6505107184192	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTGAGAATGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	36947311	36991455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.4	chr19	+	7186	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	27	-9	27	9	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATTGTGTGTTGTTTAC	NA	False	NA	18	True	AATAAA	-20	NA	36903505	36990161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.40	chr19	+	203	1	Intergenic	novelGene_14724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAAACGTCTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	36954165	36954368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36954200_36954400
ES.17737.41	chr19	+	7775	21	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	20405	4	intron_retention	FALSE	canonical	2	5	junction_1	43.6438999173997	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCAATTGTGTGTTG	NA	False	NA	13	True	AATAAA	-15	NA	36959119	36990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36959222_36960211_36960404_36960848_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.43	chr19	+	5261	13	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	30817	7	intron_retention	FALSE	canonical	3	135	junction_10	9.79051411656542	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	36969531	36990159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36969985_36971669_36971823_36971990_36972113_36972198_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.44	chr19	+	7737	11	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	31408	1303	intron_retention	FALSE	canonical	3	135	junction_8	9.51052049048842	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTGAGAATGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	36970122	36991455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36971823_36971990_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.45	chr19	+	4856	12	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	32901	1	intron_retention	FALSE	canonical	3	135	junction_9	9.75399896800121	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTGCAATTGTGTG	NA	False	NA	10	True	AATAAA	-12	NA	36971615	36990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36971823_36971990_36972113_36972198_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.47	chr19	+	4657	11	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	33274	7	intron_retention	FALSE	canonical	3	135	junction_8	9.71802449060507	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTGTGTGTTGTTT	NA	False	NA	16	True	AATAAA	-18	NA	36971988	36990159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36972113_36972198_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.48	chr19	+	198	1	Intergenic	novelGene_14728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTCCTTTCAAGGTGTC	NA	False	NA	NA	False	NA	NA	NA	36975715	36975913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_36975700_36975900
ES.17737.49	chr19	+	4054	2	ISM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	83645	-1297	48409	1297	intron_retention	FALSE	canonical	3	142	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACCAATCAGTTGAGAAT	NA	False	NA	12	True	AATAAA	-13	NA	36987123	36991449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_36987140_36987411
ES.17737.5	chr19	+	6385	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	27	-723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	26.391030417293	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAACATCCTATTAGA	NA	False	NA	NA	False	AATAAA	-23	NA	36903505	36989429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977560_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.6	chr19	+	7110	38	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	28	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	33.8552972831003	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCAATTGTGTGTTGT	NA	False	NA	14	True	AATAAA	-16	NA	36903506	36990157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966770_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972279_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.7	chr19	+	5953	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	30	1221	30	-1221	multi-exon	FALSE	canonical	3	111	junction_9	14.2774858907343	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCTCTTGCTTCATT	NA	False	NA	14	True	TATAAA	-24	NA	36903508	36988931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.8	chr19	+	6632	39	NNC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	40	-724	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	32.6162209189846	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAATAACATCCTATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	36903518	36989428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960211_36960404_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17737.9	chr19	+	8793	37	NIC	ENSMUSG00000040565.9	novel	7204	38	NA	NA	42	4	intron_retention	FALSE	canonical	3	111	junction_9	14.4241310156125	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCAATTGTGTGTTG	NA	False	NA	13	True	AATAAA	-15	NA	36903520	36990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ES.17738.1	chr19	-	1773	1	Intergenic	novelGene_14721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACCACTGCAAATAGCAC	9927	False	NA	NA	False	NA	NA	NA	36909178	36907405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36907400_36909200
ES.17739.1	chr19	-	361	1	Intergenic	novelGene_14723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAACAAAATCT	6149	False	NA	NA	False	NA	NA	NA	36919892	36919531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36919500_36919900
ES.1774.1	chr1	+	178	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	164732309	164732487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_164732300_164732500
ES.17740.1	chr19	-	186	1	Intergenic	novelGene_14725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATCTTTATGATAATTC	NA	False	NA	NA	False	NA	NA	NA	36957750	36957564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36957600_36957800
ES.17741.1	chr19	-	181	1	Intergenic	novelGene_14726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGACTTTATTA	NA	False	NA	NA	False	NA	NA	NA	36963282	36963101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36963100_36963300
ES.17742.1	chr19	-	174	1	Intergenic	novelGene_14727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAAATAGCAT	NA	False	NA	NA	False	NA	NA	NA	36974354	36974180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_36974200_36974400
ES.17743.1	chr19	-	6242	1	Antisense	novelGene_ENSMUSG00000040565.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACATGCTTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	36992497	36986255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_36986300_36992500
ES.17744.1	chr19	+	224	1	ISM	ENSMUSG00000097591.2	ENSMUST00000180609.2	1919	3	21298	1176	21298	-1176	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACATATTTTATACTTTT	NA	False	NA	NA	False	NA	NA	NA	37172540	37172764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37172500_37172800
ES.17745.1	chr19	+	179	1	Intergenic	novelGene_14733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATACAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37177851	37178030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37177900_37178000
ES.17746.1	chr19	+	2294	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-456	-13	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCATAGTTCATAGTG	NA	False	NA	12	True	ATTAAA	-20	NA	37184485	37199537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
ES.17746.10	chr19	+	2065	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	-253	-3	253	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGTTATTCAGATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	37184938	37199803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.11	chr19	+	1657	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	155	-3	19	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGCATTGAAGTGATT	NA	False	NA	12	True	AATAAA	-19	NA	37184938	37199395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.12	chr19	+	2108	5	NNC	ENSMUSG00000023307.15	novel	1293	5	NA	NA	-3	-156	intron_retention	FALSE	canonical	3	70	junction_3	293.962051122249	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACGCCTCTTTTGTA	NA	False	NA	21	True	ATTAAA	-15	NA	37184938	37199220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037
ES.17746.13	chr19	+	1320	5	FSM	ENSMUSG00000023307.15	ENSMUST00000112391.8	1293	5	-28	1	-3	-1	multi-exon	FALSE	canonical	3	653	junction_3	54.8475158963467	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATACTGTTTCCTGTCAT	NA	False	NA	11	True	AATAAA	-19	NA	37184938	37198474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037
ES.17746.14	chr19	+	1154	4	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-150	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	358.46989645808	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCTCTTTTGTATATACT	NA	False	NA	27	True	ATTAAA	-21	NA	37184938	37199226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37197701_37197886_37198037_37198205_37198788
ES.17746.15	chr19	+	4646	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	19	intron_retention	FALSE	canonical	3	710	junction_1	39.0672497112351	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGCATTGAAGTGATT	NA	False	NA	12	True	AATAAA	-19	NA	37184938	37199395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37194581_37197886_37198037_37198205_37198788
ES.17746.16	chr19	+	2106	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	252	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCGTTATTCAGATATT	NA	False	NA	NA	False	AATAAA	-18	NA	37184938	37199802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
ES.17746.17	chr19	+	3234	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	-1422	-3	1422	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATACTCCTGTTAAGT	NA	False	NA	NA	False	AATATA	-16	NA	37184938	37200972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.18	chr19	+	4476	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-151	intron_retention	FALSE	canonical	3	710	junction_1	39.0672497112351	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCTCTTTTGTATATAC	NA	False	NA	26	True	ATTAAA	-20	NA	37184938	37199225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37194581_37197886_37198037_37198205_37198788
ES.17746.19	chr19	+	2978	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-3	-1166	-3	1166	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTATCTTTCTCTAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	37184938	37200716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.2	chr19	+	1616	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-131	324	-131	-150	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCTCTTTTGTATATACT	NA	False	NA	27	True	ATTAAA	-21	NA	37184810	37199226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.20	chr19	+	4787	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	-14	intron_retention	FALSE	canonical	3	710	junction_1	39.0672497112351	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTCATAGTTCATAGT	NA	False	NA	11	True	ATTAAA	-19	NA	37184938	37199536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37194581_37197886_37198037_37198205_37198788
ES.17746.21	chr19	+	1325	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-2	-156	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACGCCTCTTTTGTA	NA	False	NA	21	True	ATTAAA	-15	NA	37184964	37199220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
ES.17746.23	chr19	+	1636	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	269	260	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAGATATTTGTTAACT	NA	False	NA	NA	False	AATAAA	-26	NA	37185243	37199810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
ES.17746.24	chr19	+	4088	2	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	10351	18	704	-18	intron_retention	FALSE	canonical	3	806	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACATCTCATAGTTCA	NA	False	NA	7	True	ATTAAA	-15	NA	37195292	37199532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37197886_37198037
ES.17746.25	chr19	+	2417	1	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	2390	19	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGCATTGAAGTGATT	NA	False	NA	12	True	AATAAA	-19	NA	37196978	37199395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37197000_37199400
ES.17746.26	chr19	+	1261	1	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	3218	-309	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACACGCGTCAGCTCTG	NA	False	NA	NA	False	AATAAA	-42	NA	37197806	37199067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37197800_37199100
ES.17746.3	chr19	+	1855	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-50	4	-50	-4	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATAGTGTACTTTTGA	NA	False	NA	21	True	ATTAAA	-29	NA	37184891	37199546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.4	chr19	+	1736	7	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-46	-151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	350.059994858024	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCTCTTTTGTATATAC	NA	False	NA	26	True	ATTAAA	-20	NA	37184895	37199225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194713_37196730_37196937_37197701_37197886_37198037_37198205_37198788
ES.17746.5	chr19	+	4153	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	-38	-2306	-38	2306	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTTGTCTGTTGAAC	NA	False	NA	10	True	AATAAA	-20	NA	37184903	37201856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ES.17746.6	chr19	+	3053	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-28	1174	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTAGGTTGGTTATC	NA	False	NA	NA	False	AATAAA	-22	NA	37184913	37200724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
ES.17746.7	chr19	+	1672	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-7	-13	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCATAGTTCATAGTG	NA	False	NA	12	True	ATTAAA	-20	NA	37184934	37199537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
ES.17746.8	chr19	+	1722	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	-3	42	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAAAGAGATTTTGTT	NA	False	NA	35	True	AATAAA	-42	NA	37184938	37199418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
ES.17746.9	chr19	+	820	3	FSM	ENSMUSG00000023307.15	ENSMUST00000148105.2	991	3	-36	207	-3	-207	multi-exon	FALSE	canonical	3	710	junction_1	1.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAAAGGAGACTAGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	37184938	37194833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37185304_37188069_37188273_37194581
ES.17747.1	chr19	+	157	1	Intergenic	novelGene_14736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	5910	False	NA	NA	False	NA	NA	NA	37269907	37270064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37269900_37270100
ES.17748.1	chr19	+	1787	14	Antisense	novelGene_ENSMUSG00000056999.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGAAGCCGGCCCTGC	9284	False	NA	NA	False	NA	NA	NA	37273281	37340054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_37273364_37275449_37275574_37281292_37281395_37287185_37287291_37289481_37289560_37290902_37291001_37291378_37291471_37292231_37292396_37292803_37292917_37295375_37295498_37302545_37302715_37306377_37306582_37307819_37308012_37339912
ES.17748.2	chr19	+	178	1	Intergenic	novelGene_14737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATAATCTGATC	NA	False	NA	NA	False	NA	NA	NA	37299542	37299720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37299500_37299700
ES.17749.1	chr19	+	168	1	Intergenic	novelGene_14738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	37341413	37341581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37341400_37341600
ES.17749.2	chr19	+	442	1	Intergenic	novelGene_14739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37341415	37341857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37341400_37341900
ES.1775.1	chr1	+	2468	1	Antisense	novelGene_ENSMUSG00000040848.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165009837	165012305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165009800_165012300
ES.17750.1	chr19	+	208	1	Intergenic	novelGene_14740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAAAAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	37345470	37345678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37345500_37345700
ES.17750.2	chr19	+	361	1	Intergenic	novelGene_14741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAAGGATTGC	NA	False	NA	NA	False	NA	NA	NA	37345471	37345832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37345500_37345800
ES.17751.1	chr19	-	5917	10	NIC	ENSMUSG00000039652.17	novel	5899	11	NA	NA	20	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_7	3.12694383988229	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATCTCAACAAGCCTTT	9225	False	NA	0	True	AATAAA	-23	NA	37184841	36998690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116461_37116622_37151366_37152386_37184631
ES.17751.10	chr19	-	2024	1	FSM	ENSMUSG00002075338.1	ENSMUST00020181851.1	78	1	11	-1957	11	1957	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAGAAAAAGATACA	1157	False	NA	NA	False	NA	NA	NA	37126551	37124527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37124500_37126600
ES.17751.100	chr19	-	2944	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	-155	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	171.353766872952	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340010	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.102	chr19	-	2926	23	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-54	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	181.068026347252	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340064	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265536_37275495_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.103	chr19	-	3238	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-55	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	274.388967627264	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340065	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326557_37339912
ES.17751.105	chr19	-	3184	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	173.905206458384	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340085	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258132_37261607_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.106	chr19	-	3326	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.463755354562	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340024	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37251215_37251311_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.107	chr19	-	3466	27	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	261.524829961498	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340023	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37326422_37326557_37339912
ES.17751.108	chr19	-	5227	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-69	-155	intron_retention	FALSE	canonical	0	0	junction_10	181.068026347252	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340079	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37273281_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.109	chr19	-	6745	3	ISM	ENSMUSG00000056999.17	ENSMUST00000154339.8	2001	15	28811	158	12297	-158	intron_retention	FALSE	canonical	3	878	junction_2	24	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTATAGATGTAGAATAT	8106	False	NA	-24	True	AATAAA	-9	NA	37255980	37247986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37248237_37248903_37248972_37249553
ES.17751.11	chr19	-	5336	1	Intergenic	novelGene_14730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGATGAAAAAGGTGAACA	NA	False	NA	NA	False	NA	NA	NA	37135586	37130250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37130200_37135600
ES.17751.110	chr19	-	4969	17	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-48	2995	intron_retention	FALSE	canonical	1	4	junction_16	198.841399974326	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTGTATGTGTTTC	NA	False	NA	NA	False	TTTAAA	-40	NA	37340058	37254987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37339912
ES.17751.111	chr19	-	4632	14	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-65	24312	-65	8608	5prime_fragment	FALSE	canonical	3	707	junction_2	54.642355204077	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGTGTTGTATATGC	NA	False	NA	NA	False	GATAAA	-4	NA	37340075	37270453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.112	chr19	-	2791	14	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-101	26189	-101	6731	5prime_fragment	FALSE	canonical	3	707	junction_2	54.642355204077	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	37340111	37272330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.113	chr19	-	2689	15	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-42	6586	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_13	262.136512184793	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTATGCTGGGCGGTG	NA	False	NA	NA	False	AATAAA	-29	NA	37340052	37272475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.114	chr19	-	2605	14	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-60	26334	-60	6586	5prime_fragment	FALSE	canonical	3	707	junction_2	54.642355204077	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTATGCTGGGCGGTG	NA	False	NA	NA	False	AATAAA	-29	NA	37340070	37272475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.115	chr19	-	2393	14	Fusion	ENSMUSG00000080885.2_ENSMUSG00000056999.17	novel	1723	12	NA	NA	-602	78	multi-exon	FALSE	canonical	0	0	junction_1	294.030208165096	822	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTATGCTGGGCGGTG	NA	False	NA	NA	False	AATAAA	-29	NA	37340612	37272475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_37273282_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37340583
ES.17751.116	chr19	-	2485	14	Fusion	ENSMUSG00000080885.2_ENSMUSG00000056999.17	novel	1723	12	NA	NA	-23	78	multi-exon	FALSE	canonical	0	0	junction_1	220.035473202517	822	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTATGCTGGGCGGTG	NA	False	NA	NA	False	AATAAA	-29	NA	37340033	37272475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_37273282_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.117	chr19	-	2155	13	NIC	ENSMUSG00000056999.17	novel	1723	12	NA	NA	-24	569	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	228.791192405263	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	NA	False	AGTAAA	-19	NA	37340034	37280479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37281078_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.118	chr19	-	158	1	Intergenic	novelGene_14742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATAAATCT	5857	False	NA	-24	True	NA	NA	NA	37347780	37347622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37347600_37347800
ES.17751.12	chr19	-	210	1	Intergenic	novelGene_14731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTACTTTGTACCCCC	NA	False	NA	NA	False	NA	NA	NA	37160677	37160467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37160500_37160700
ES.17751.13	chr19	-	205	2	Intergenic	novelGene_14732	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATCTAAGTCTTAAAAAAA	5857	False	NA	NA	False	NA	NA	NA	37347780	37160709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37160734_37347599
ES.17751.14	chr19	-	162	1	Intergenic	novelGene_14734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37239569	37239407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37239400_37239600
ES.17751.15	chr19	-	247	1	Intergenic	novelGene_14735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTTGGGTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	37242820	37242573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37242600_37242800
ES.17751.16	chr19	-	5572	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-46	-467	-46	467	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTTAACATGAATATTT	NA	False	NA	NA	False	NA	NA	NA	37340056	37245674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.17	chr19	-	5567	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-499	-9	-499	9	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGTGACTTTGTAG	NA	False	NA	7	True	AATAAA	-27	NA	37340509	37246132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.18	chr19	-	6357	3	ISM	ENSMUSG00000056999.17	ENSMUST00000154339.8	2001	15	31051	-1694	14537	7	3prime_fragment	FALSE	canonical	3	878	junction_2	24	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTGTGTGACTTTGT	NA	False	NA	5	True	AATAAA	-25	NA	37253740	37246134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37248237_37248903_37248972_37249553
ES.17751.19	chr19	-	5081	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	173.585828714661	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTTGTGTTGTGTGAC	NA	False	NA	0	True	AATAAA	-20	NA	37340005	37246139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262722_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.2	chr19	-	5820	10	NIC	ENSMUSG00000039652.17	novel	2411	10	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	2.19988776369148	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGATCTCAACAAGCCTT	9190	False	NA	-1	True	AATAAA	-22	NA	37184876	36998691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184693
ES.17751.20	chr19	-	4332	2	NIC	ENSMUSG00000056999.17	novel	2001	15	NA	NA	17224	2	intron_retention	FALSE	canonical	3	878	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTTGTGTTGTGTGAC	NA	False	NA	0	True	AATAAA	-20	NA	37251053	37246139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248972_37249553
ES.17751.21	chr19	-	5252	26	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	227.512637011661	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTTGTGTTGTGTGAC	NA	False	NA	0	True	AATAAA	-20	NA	37340056	37246139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37267442_37267588_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.23	chr19	-	5209	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	2	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTTGTGTTGTGTGAC	NA	False	NA	0	True	AATAAA	-20	NA	37340056	37246139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.24	chr19	-	5135	25	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	231.467585323638	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTTTGTGTTGTGTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37340085	37246140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37267442_37267588_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.25	chr19	-	4910	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	173.226896456511	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTTTGTGTTGTGTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37340028	37246140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.26	chr19	-	4100	27	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.386938945957	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340041	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37247048_37248139_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.27	chr19	-	5124	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	173.541616646651	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306389_37306588_37307826_37308012_37339912
ES.17751.28	chr19	-	5272	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	228.621209864702	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326561_37339912
ES.17751.29	chr19	-	4036	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	169.843928357772	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340075	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37247048_37248135_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.30	chr19	-	6298	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	intron_retention	FALSE	canonical	3	707	junction_12	60.483464909099	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.33	chr19	-	4384	5	ISM	ENSMUSG00000056999.17	ENSMUST00000154339.8	2001	15	27566	-1687	11052	0	3prime_fragment	FALSE	canonical	3	876	junction_3	22.4874965258474	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	6861	False	NA	-2	True	AATAAA	-18	NA	37257225	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139
ES.17751.34	chr19	-	5063	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	172.950975512009	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340005	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265487_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.35	chr19	-	4821	24	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	277.31303243521	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340075	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326561_37339912
ES.17751.37	chr19	-	4640	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	175.242830343432	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340032	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.38	chr19	-	5256	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	228.096765430814	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340066	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37304304_37304446_37306379_37306588_37307826_37308012_37339912
ES.17751.4	chr19	-	5862	10	NIC	ENSMUSG00000039652.17	novel	4224	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	2.19988776369148	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGTGCGAGATCTCAACA	9204	False	NA	-7	True	AATAAA	-16	NA	37184862	36998697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184631
ES.17751.40	chr19	-	5851	20	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	0	intron_retention	FALSE	canonical	1	5	junction_1	184.707974952573	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340056	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37249627_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.41	chr19	-	5474	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	173.05341480306	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340059	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339546
ES.17751.43	chr19	-	4949	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_23	173.343774829706	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37339912
ES.17751.46	chr19	-	5266	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	172.867402620878	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340085	37246141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339780
ES.17751.48	chr19	-	7051	25	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	-1	intron_retention	FALSE	canonical	2	2	junction_10	173.23353998288	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCGCTTTGTGTTGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	37340023	37246142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37267588_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.5	chr19	-	5751	10	NNC	ENSMUSG00000039652.17	novel	2411	10	NA	NA	-153	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	2.92287698621465	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGTGCGAGATCTCAACA	9006	False	NA	-7	True	AATAAA	-16	NA	37185060	36998697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184940
ES.17751.50	chr19	-	5126	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	222.716084735701	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTCGGTCTGCGCTTT	NA	False	NA	-12	True	AATAAA	-8	NA	37340085	37246151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37340012
ES.17751.52	chr19	-	5019	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-63	103	-63	-103	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCACGAGTTGCCAG	NA	False	NA	-105	True	NA	NA	NA	37340073	37246244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.53	chr19	-	4801	21	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-11743	757	intron_retention	FALSE	canonical	3	707	junction_12	64.1824742433634	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGCTATGTTTCCACAC	NA	False	NA	NA	False	ATTAAA	-18	NA	37302715	37247071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546
ES.17751.54	chr19	-	4208	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-79	930	-79	757	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGCTATGTTTCCACAC	NA	False	NA	NA	False	ATTAAA	-18	NA	37340089	37247071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.55	chr19	-	4272	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	754	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	172.867402620878	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGTGGCTATGTTTCCA	NA	False	NA	NA	False	ATTAAA	-15	NA	37340024	37247074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339780
ES.17751.56	chr19	-	3969	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	751	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	173.226896456511	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGCGTGGCTATGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	37340024	37247077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.57	chr19	-	4288	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-65	749	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAAGCGTGGCTATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	37340075	37247079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.58	chr19	-	4118	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-9	635	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGGAGTGGACTTTTA	NA	False	NA	NA	False	TATAAA	-11	NA	37340019	37247193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.59	chr19	-	3740	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	628	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	171.353766872952	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGATGACTGGAGTGG	NA	False	NA	NA	False	TATAAA	-4	NA	37340023	37247200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.6	chr19	-	4597	7	NIC	ENSMUSG00000039652.17	novel	4224	11	NA	NA	36	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.18993502999218	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAACGTGCGAGATCTCA	9241	False	NA	-10	True	AATAAA	-13	NA	37184825	36998700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37002488_37021921_37022104_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37184631
ES.17751.60	chr19	-	3665	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-75	1469	-75	218	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTAGTCAAATGCTGG	NA	False	NA	NA	False	TATAAA	-20	NA	37340085	37247610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.61	chr19	-	3461	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-75	1673	-75	14	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTTTTCTTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	37340085	37247814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.62	chr19	-	3715	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	-473	1817	-473	-130	multi-exon	FALSE	canonical	3	707	junction_13	63.1947496940125	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTAAATCTCTTAATTT	NA	False	NA	4	True	AATAAA	-37	NA	37340483	37247958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.63	chr19	-	2690	22	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-22	-141	combination_of_known_splicesites	FALSE	canonical	1	4	junction_21	184.089818361825	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAATCTCTTAAA	NA	False	NA	-7	True	AATAAA	-26	NA	37340032	37247969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37339912
ES.17751.66	chr19	-	3116	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-146	combination_of_known_splicesites	FALSE	canonical	2	22	junction_23	173.343774829706	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATATTTTTAAAATCTC	NA	False	NA	-12	True	AATAAA	-21	NA	37340085	37247974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37339912
ES.17751.67	chr19	-	502	4	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-4	-149	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	425.658183157435	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAGAATATTTTTAAAAT	NA	False	NA	-15	True	AATAAA	-18	NA	37340014	37247977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37339912
ES.17751.68	chr19	-	3325	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-56	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	274.28593846872	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAGAATATTTTTAAAAT	NA	False	NA	-15	True	AATAAA	-18	NA	37340066	37247977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326561_37339912
ES.17751.69	chr19	-	3467	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-12	-151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	222.716084735701	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAGAATATTTTTAAA	NA	False	NA	-17	True	AATAAA	-16	NA	37340022	37247979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339780
ES.17751.7	chr19	-	3262	1	ISM	ENSMUSG00000039652.17	ENSMUST00000079754.11	5899	11	182686	223	149320	-217	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTCTTTAAAGGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	37002175	36998913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_36998900_37002200
ES.17751.70	chr19	-	3368	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-15	-151	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	172.867402620878	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAGAATATTTTTAAA	NA	False	NA	-17	True	AATAAA	-16	NA	37340025	37247979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339780
ES.17751.71	chr19	-	3415	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-93	-152	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340103	37247980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.72	chr19	-	7569	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-62	-152	intron_retention	FALSE	canonical	1	3	junction_9	234.753452295891	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340072	37247980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37267442_37267588_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.73	chr19	-	5316	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-10	-152	intron_retention	FALSE	canonical	3	707	junction_12	62.4310583847471	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340020	37247980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.74	chr19	-	3798	2	ISM	ENSMUSG00000056999.17	ENSMUST00000154339.8	2001	15	32345	153	15831	-153	intron_retention	FALSE	canonical	3	926	junction_1	0	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37252446	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37248237_37248903
ES.17751.75	chr19	-	2868	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-42	-153	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	180.874579851243	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340052	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37339912
ES.17751.76	chr19	-	3359	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.463755354562	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340085	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37251921_37251987_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.77	chr19	-	3032	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	233.63495014778	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340085	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37295472_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912_37339976_37340027
ES.17751.78	chr19	-	3314	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-56	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	173.774993206413	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340066	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287330_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.79	chr19	-	3159	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-108	-153	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	173.226896456511	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATGTAGAATATTTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	37340118	37247981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.8	chr19	-	4459	9	ISM	ENSMUSG00000039652.17	ENSMUST00000123727.8	2411	10	23951	-2997	-62	237	3prime_fragment	FALSE	canonical	2	6	junction_7	1.71391365010026	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTATTTTCTTTAAGGA	NA	False	NA	NA	False	ATTAAA	-25	NA	37151557	36999041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366
ES.17751.80	chr19	-	3865	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-509	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	228.621209864702	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340519	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326561_37339912
ES.17751.82	chr19	-	3293	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	173.898198188864	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340056	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307797_37308012_37339912
ES.17751.84	chr19	-	2832	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-55	-154	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	175.242830343432	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340065	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.85	chr19	-	2935	24	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-56	-154	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	263.626418381787	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340066	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.86	chr19	-	3597	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	-154	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	173.05341480306	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340023	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339546
ES.17751.87	chr19	-	10831	8	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-5442	-154	intron_retention	FALSE	canonical	3	20	junction_3	292.087420517368	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37273719	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068
ES.17751.89	chr19	-	3364	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-13	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	228.096765430814	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340023	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37303188_37303322_37306379_37306588_37307826_37308012_37339912
ES.17751.9	chr19	-	208	1	Intergenic	novelGene_14729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGGTGCACATGTCT	NA	False	NA	NA	False	NA	NA	NA	37082424	37082216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37082200_37082400
ES.17751.90	chr19	-	3005	24	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-94	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	277.31303243521	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340104	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37326422_37326557_37339912
ES.17751.93	chr19	-	2267	16	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	1408	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	216.835318976304	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	6277	False	NA	-20	True	AATAAA	-13	NA	37289564	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257691_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481
ES.17751.94	chr19	-	4396	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-14	-154	intron_retention	FALSE	canonical	3	707	junction_12	60.483464909099	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340024	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.95	chr19	-	3293	25	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-75	-154	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	231.467585323638	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340085	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37267442_37267588_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17751.96	chr19	-	3253	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-101	-154	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_5	260.963745353428	875	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340111	37247982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
ES.17751.98	chr19	-	3201	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-46	-155	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	173.424302385349	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATGTAGAATATTTT	NA	False	NA	-21	True	AATAAA	-12	NA	37340056	37247983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ES.17752.1	chr19	+	249	1	Intergenic	novelGene_14743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATACATAAAT	NA	False	NA	NA	False	NA	NA	NA	37355777	37356026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37355800_37356000
ES.17753.1	chr19	-	184	1	Intergenic	novelGene_14744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACAATCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	37360389	37360205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37360200_37360400
ES.17754.1	chr19	+	826	1	Intergenic	novelGene_14745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACAAAAAGACAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	37362425	37363251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37362400_37363300
ES.17755.1	chr19	+	5120	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-285	-16	-285	16	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTGTGCGCTGCTTCCC	NA	False	NA	24	True	ATTAAA	-31	NA	37364565	37410323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.10	chr19	+	9042	19	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-56	-2907	intron_retention	FALSE	canonical	3	6	junction_6	83.5769771594493	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	NA	False	NA	3	True	ATTAAA	-13	NA	37364794	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37377062_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348
ES.17755.12	chr19	+	4211	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-54	662	-54	-662	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTCGCTCTTTCGCTTT	NA	False	NA	23	True	AATAAA	-34	NA	37364796	37409645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.13	chr19	+	1593	6	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-52	33769	-52	-17681	5prime_fragment	FALSE	canonical	3	325	junction_4	15.628179676469	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGTGGAATTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	37364798	37376538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758
ES.17755.14	chr19	+	3804	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-52	-2907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	79.6846676500781	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	NA	False	NA	3	True	ATTAAA	-13	NA	37364798	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37406866
ES.17755.15	chr19	+	4074	3	NIC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-49	-17680	intron_retention	FALSE	canonical	3	349	junction_2	0.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTGTGGAATTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	37364801	37376539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37365116_37372687_37373088_37373179
ES.17755.16	chr19	+	4767	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-49	101	-49	-101	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGCCAACCTAATCTGT	NA	False	NA	-93	True	AATAAA	-26	NA	37364801	37410206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.17	chr19	+	6565	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	80.1441162224612	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364801	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37377062_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.18	chr19	+	4202	21	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-49	2907	-49	-2907	5prime_fragment	FALSE	canonical	3	280	junction_17	32.3797776397553	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	NA	False	NA	3	True	ATTAAA	-13	NA	37364801	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348
ES.17755.19	chr19	+	4825	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-47	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	81.0435620941978	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGCCTGTACATTTGT	NA	False	NA	12	True	ATTAAA	-19	NA	37364803	37410311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401613_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.21	chr19	+	4571	23	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-30	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	79.4398909930756	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCAACCTAATCTGTG	NA	False	NA	-92	True	AATAAA	-27	NA	37364820	37410207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706_37409809_37409986
ES.17755.26	chr19	+	4650	23	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	79.4398909930756	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364828	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706_37409796_37409986
ES.17755.27	chr19	+	3093	19	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-21	8402	-21	7686	5prime_fragment	FALSE	canonical	3	280	junction_17	26.5688599866019	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCATTTGTTCTTCCC	NA	False	NA	NA	False	AATATA	-21	NA	37364829	37401905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568
ES.17755.29	chr19	+	4899	21	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-18	-2907	intron_retention	FALSE	canonical	1	2	junction_14	106.163023223719	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	NA	False	NA	3	True	ATTAAA	-13	NA	37364832	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395147_37395234_37395441_37395615_37397923_37398050_37398173_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348
ES.17755.3	chr19	+	4890	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.8314783432572	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364769	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386576_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.30	chr19	+	3668	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-17	-1190	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	81.0887926303594	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATCATTGTTCCAGGT	NA	False	NA	8	True	ATTAAA	-12	NA	37364833	37409117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375736_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.31	chr19	+	5357	23	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.16075847942	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTCGTGCTGCCTGT	NA	False	NA	4	True	ATTAAA	-11	NA	37364833	37410303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37374650_37375176_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.33	chr19	+	4158	21	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-17	-2909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.0598544286874	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATGCAAGACATATAATA	NA	False	NA	1	True	ATTAAA	-11	NA	37364833	37407398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386576_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348
ES.17755.34	chr19	+	4688	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.1936740048921	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTGCTGCCTGTACATT	NA	False	NA	9	True	ATTAAA	-16	NA	37364835	37410308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37364969_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.36	chr19	+	4676	23	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.4398909930756	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364836	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37364860_37365016_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.37	chr19	+	4628	20	NIC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-11	-2907	intron_retention	FALSE	canonical	3	280	junction_16	32.8686633508409	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	NA	False	NA	3	True	ATTAAA	-13	NA	37364839	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348
ES.17755.38	chr19	+	2063	14	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-5	14698	-5	1390	5prime_fragment	FALSE	canonical	3	286	junction_7	25.6814809062574	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTTAGTAAATCTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	37364845	37395609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441
ES.17755.39	chr19	+	5390	23	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.284377569024	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37365017	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37377062_37377801_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.4	chr19	+	3737	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	-77	1159	-77	-1159	multi-exon	FALSE	canonical	3	280	junction_17	34.0452546631592	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAATGCCATCTCCTT	NA	False	NA	39	True	ATTAAA	-43	NA	37364773	37409148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.40	chr19	+	6944	1	Intergenic	novelGene_14746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	37365483	37372427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37365500_37372400
ES.17755.41	chr19	+	4306	1	NIC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	7383	-17680	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTGTGGAATTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	37372233	37376539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37372200_37376500
ES.17755.42	chr19	+	4557	21	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	7834	0	7834	0	3prime_fragment	FALSE	canonical	3	280	junction_16	34.8758870854922	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37372684	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.43	chr19	+	4250	18	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	10612	-4	10612	4	3prime_fragment	FALSE	canonical	3	280	junction_13	36.8988142268757	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGCCTGTACATTTGT	NA	False	NA	12	True	ATTAAA	-19	NA	37375462	37410311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.45	chr19	+	3600	14	NNC	ENSMUSG00000012443.5	novel	3127	2	NA	NA	-4594	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.783498696302	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCGTGCTGCCTGTACA	8413	False	NA	7	True	ATTAAA	-14	NA	37386034	37410306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37386133_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.47	chr19	+	8594	8	NNC	ENSMUSG00000012443.5	novel	3127	2	NA	NA	-275	-2907	intron_retention	FALSE	canonical	1	1	junction_4	148.511526385624	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAGACATATAATATC	2224	False	NA	3	True	ATTAAA	-13	NA	37390353	37407400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37390454_37390652_37392098_37392561_37395615_37397923_37398050_37398177_37399082_37399778_37400059_37401568_37401792_37404937
ES.17755.48	chr19	+	5814	12	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	106.775968448039	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	2587	False	NA	8	True	ATTAAA	-15	NA	37390716	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37390741_37391908_37392098_37392561_37395234_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.50	chr19	+	3646	2	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	32423	9264	6645	6824	intron_retention	FALSE	canonical	3	343	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCTTTTCTAGGTAAA	9144	False	NA	NA	False	NA	NA	NA	37397273	37401043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37398050_37398173
ES.17755.51	chr19	+	3135	5	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	9341	-1184	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	167.195058240368	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTCCAGGTTTAGAC	NA	False	NA	14	True	ATTAAA	-18	NA	37399969	37409123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37400059_37401568_37401792_37404937_37405081_37406348_37407878_37407972
ES.17755.52	chr19	+	1863	3	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	40085	0	14307	0	3prime_fragment	FALSE	canonical	3	403	junction_2	14.5	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37404935	37410307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37405081_37406348_37406466_37408706
ES.17755.7	chr19	+	5914	22	NNC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-61	-663	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	80.1441162224612	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCCTCGCTCTTTCGCTT	NA	False	NA	22	True	AATAAA	-33	NA	37364789	37409644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37377062_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17755.8	chr19	+	5365	21	NIC	ENSMUSG00000012443.5	novel	4819	22	NA	NA	-60	-682	intron_retention	FALSE	canonical	3	280	junction_16	34.8337121191526	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTCTGTTGAAATATT	NA	False	NA	3	True	AATAAA	-14	NA	37364790	37409625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ES.17756.1	chr19	-	174	1	Intergenic	novelGene_14747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCTTAAT	9013	False	NA	NA	False	NA	NA	NA	37367222	37367048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37367000_37367200
ES.17757.1	chr19	-	196	1	Intergenic	novelGene_14748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTTTAGTCTTTCAG	9892	False	NA	NA	False	NA	NA	NA	37403988	37403792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37403800_37404000
ES.17758.1	chr19	+	1885	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	-83	0	-83	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGCACGCGTGT	NA	False	NA	79	True	NA	NA	NA	37423174	37429179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
ES.17758.2	chr19	+	3745	4	NNC	ENSMUSG00000024986.13	novel	1802	4	NA	NA	-17	56044	intron_retention	FALSE	non_canonical	0	0	junction_3	16.779617264871	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTACTTGTATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	37423240	37485223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37423682_37425636_37425816_37426014_37429121_37485204
ES.17758.3	chr19	+	3669	3	ISM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	33	66	33	-7	intron_retention	FALSE	canonical	3	34	junction_1	1.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAACGACCCTGTTTGA	NA	False	NA	13	True	AATGAA	-26	NA	37423290	37429113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_37423682_37425636_37425816_37426014
ES.17758.4	chr19	+	223	1	Intergenic	novelGene_14749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	37451367	37451590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37451400_37451600
ES.17759.1	chr19	-	5544	2	Genic_Genomic	ENSMUSG00000102353.2	novel	1748	1	NA	NA	-564	3395	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAATTTGGTGCCATTTA	NA	False	NA	NA	False	ATTAAA	-11	NA	37423668	37417961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_37420925_37421087
ES.17759.2	chr19	-	2157	1	FSM	ENSMUSG00000102353.2	ENSMUST00000192635.2	1748	1	-398	-11	-398	11	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCATTGAACTCAAGT	NA	False	NA	NA	False	AGTAAA	-13	NA	37423502	37421345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37421300_37423500
ES.1776.1	chr1	-	5536	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165022008	165001905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.10	chr1	-	6690	5	ISM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	7814	8	7693	-8	3prime_fragment	FALSE	canonical	3	68	junction_2	2.87228132326901	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAAATGTAGTGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	165014193	165001913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576
ES.1776.11	chr1	-	5513	10	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	52	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.499958847714	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAAATGTAGTGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	165021955	165001913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011443_165011538_165011575_165012576_165012659_165014352_165014458_165015537_165015624_165015816_165015904_165021808
ES.1776.12	chr1	-	4770	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9019954019753	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAAATGTAGTGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	165021884	165001913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004951_165005584_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.13	chr1	-	5289	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	96	150	-21	-150	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTCTTGAGGATCTG	NA	False	NA	NA	False	AATATA	-16	NA	165021911	165002055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.14	chr1	-	5822	8	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	30	161	intron_retention	FALSE	non_canonical	0	0	junction_1	34.4567164152716	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTGCTAGACTTTGTG	NA	False	NA	NA	False	AATAAA	-29	NA	165021977	165003278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004885_165004942_165006865_165009620_165011452_165011538_165011575_165012576_165012662_165015537_165015624_165015816_165015904_165021808
ES.1776.15	chr1	-	4102	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	57	1376	57	158	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCCTGCTAGACTTT	NA	False	NA	NA	False	AATAAA	-26	NA	165021950	165003281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.16	chr1	-	4005	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-24	155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9019954019753	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGATGCCTGCTAGAC	NA	False	NA	NA	False	AATAAA	-23	NA	165021914	165003284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.17	chr1	-	3086	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-18	-758	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9019954019753	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGGTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	165021908	165004197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.18	chr1	-	1091	8	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	-27	552	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.9652820156803	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCTCTTGCCCTTAC	NA	False	NA	NA	False	AATACA	-20	NA	165021917	165006254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015899_165021808
ES.1776.19	chr1	-	1198	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-26	550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.5689173139053	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTCTCTTGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	165021916	165006256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165014352_165014458_165015537_165015624_165015816_165015904_165021808
ES.1776.2	chr1	-	5368	7	FSM	ENSMUSG00000040848.12	ENSMUST00000192185.6	3798	7	-36	-1534	-36	0	multi-exon	FALSE	canonical	1	2	junction_5	27.3780122645081	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165021926	165001905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015816_165015904_165021808
ES.1776.20	chr1	-	1086	8	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	-26	545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5483770978682	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGATTCTTTCTCTTG	NA	False	NA	NA	False	AATACA	-13	NA	165021916	165006261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006865_165009620_165009645_165011391_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.21	chr1	-	5704	6	NIC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	-19	544	intron_retention	FALSE	canonical	3	68	junction_3	6.15142259969188	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGGATTCTTTCTCTT	NA	False	NA	NA	False	AATACA	-12	NA	165021909	165006262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165006865_165009620_165011452_165011538_165011575_165012576_165015624_165015816_165015904_165021808
ES.1776.22	chr1	-	1998	1	NIC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	18	-13185	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAAATATTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	165021989	165019991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165020000_165022000
ES.1776.3	chr1	-	5425	9	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	52	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.9019954019753	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165021955	165001905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004885_165004942_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.4	chr1	-	5645	9	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.6142838394106	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165021954	165001905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165016483_165016647_165021808
ES.1776.5	chr1	-	5446	7	NNC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.1345971280123	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165021909	165001905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006900_165011391_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.6	chr1	-	5625	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.2952686163159	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	165021915	165001911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165006865_165009620_165009651_165010434_165010623_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.7	chr1	-	5379	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-27	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.9019954019753	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	165021917	165001911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004864_165004923_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.8	chr1	-	5376	9	NNC	ENSMUSG00000040848.12	novel	680	9	NA	NA	-22	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.9019954019753	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	165021912	165001911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165004874_165004931_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ES.1776.9	chr1	-	12788	5	NIC	ENSMUSG00000040848.12	novel	5535	8	NA	NA	2	-8	intron_retention	FALSE	canonical	3	68	junction_2	6.87386354243376	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAAATGTAGTGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	165021888	165001913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165011452_165011538_165011575_165012576_165015624_165015816_165015904_165021808
ES.17760.1	chr19	-	2932	2	Antisense	novelGene_ENSMUSG00000024986.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTCTGCTCAGG	NA	False	NA	NA	False	NA	NA	NA	37428174	37425043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_37425814_37426012
ES.17761.1	chr19	+	3661	23	NNC	ENSMUSG00000053799.9	novel	3728	23	NA	NA	-22747	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3911067186546	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGGAGATTCTCATTTC	NA	False	NA	29	True	ATTAAA	-34	NA	37486579	37672507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37486695_37525196_37525348_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.10	chr19	+	2685	22	NNC	ENSMUSG00000053799.9	novel	3543	22	NA	NA	-6	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	21.7866380236117	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATTGCAAATATTAGAAA	1904	False	NA	NA	False	AATAAA	-13	NA	37538900	37671678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641824_37641905_37670107_37670221_37671293
ES.17761.12	chr19	+	160	1	Intergenic	novelGene_14752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAAAAAAATATT	NA	False	NA	NA	False	NA	NA	NA	37660944	37661104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_37660900_37661100
ES.17761.13	chr19	+	7618	1	NIC	ENSMUSG00000053799.9	novel	3728	23	NA	NA	125967	-16	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTCTTTCAGCTATT	NA	False	NA	13	True	ATTAAA	-18	NA	37664873	37672491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_37664900_37672500
ES.17761.2	chr19	+	3492	22	NNC	ENSMUSG00000053799.9	novel	3728	23	NA	NA	-22747	-18	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.7866380236117	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGCTCTTTCAGCTA	NA	False	NA	11	True	ATTAAA	-16	NA	37486579	37672489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37486695_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.3	chr19	+	3600	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-57	0	-57	0	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGGAGATTCTCATTTC	1812	False	NA	29	True	ATTAAA	-34	NA	37538808	37672507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.4	chr19	+	2772	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	-35	806	-35	-2	multi-exon	FALSE	canonical	3	69	junction_16	11.2298193902402	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTGCTTGCATTTT	1834	False	NA	NA	False	AATAAA	-36	NA	37538830	37671701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.5	chr19	+	2633	22	NNC	ENSMUSG00000053799.9	novel	3543	22	NA	NA	-14	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.5192238828089	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATGTCTCTGCTTG	1855	False	NA	NA	False	AATAAA	-30	NA	37538851	37671695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37539014_37558942_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.6	chr19	+	2730	22	FSM	ENSMUSG00000053799.9	ENSMUST00000238817.2	2692	22	-46	8	-5	-8	multi-exon	FALSE	canonical	2	5	junction_2	21.0093381678108	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATGTCTCTGCTTG	1864	False	NA	NA	False	AATAAA	-30	NA	37538860	37671695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_37539014_37558830_37559003_37560046_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17761.9	chr19	+	3403	22	NNC	ENSMUSG00000053799.9	novel	3543	22	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.5192238828089	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCGGAGATTCTCATT	1895	False	NA	27	True	ATTAAA	-32	NA	37538891	37672505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_37539014_37558942_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ES.17762.1	chr19	-	178	1	Intergenic	novelGene_14750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAACTATATG	NA	False	NA	NA	False	NA	NA	NA	37513938	37513760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37513800_37513900
ES.17763.1	chr19	-	204	1	Intergenic	novelGene_14751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAACGTTTGGCTAGAAT	4133	False	NA	NA	False	NA	NA	NA	37557443	37557239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37557200_37557400
ES.17764.1	chr19	-	1674	2	Antisense	novelGene_ENSMUSG00000053799.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37592705	37590987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_37592210_37592253
ES.17765.1	chr19	-	202	1	Intergenic	novelGene_14753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGCTAAGCTATGCTG	NA	False	NA	NA	False	CATAAA	-6	NA	37663755	37663553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_37663600_37663800
ES.17766.1	chr19	-	1674	3	Antisense	novelGene_ENSMUSG00000062432.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTTCAAGTGTTGCT	6968	False	NA	NA	False	ATTAAA	-22	NA	37686131	37665830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_37666845_37685175_37685312_37685607
ES.17767.1	chr19	+	794	1	Intergenic	novelGene_14754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	CATAAA	-11	NA	38014410	38015204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38014400_38015200
ES.17768.1	chr19	-	6967	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-3	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	34.0334055731897	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATCTTCATGTGTCTTA	8901	False	NA	NA	False	AATAAA	-34	NA	38031802	37887477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.10	chr19	-	5630	43	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-13315	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	43.2292903243867	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	NA	False	NA	-5	True	AATAAA	-16	NA	37968889	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909238_37909842_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796
ES.17768.11	chr19	-	6603	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	17529	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	40.355351118598	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8532	False	NA	-5	True	AATAAA	-16	NA	38014270	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956892_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.12	chr19	-	6735	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.500709241711	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8864	False	NA	-5	True	AATAAA	-16	NA	38031839	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975256_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.13	chr19	-	6862	55	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	37.7728981961198	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8816	False	NA	-5	True	AATAAA	-16	NA	38031887	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915458_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956892_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.16	chr19	-	6642	52	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.4372713095318	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8866	False	NA	-5	True	AATAAA	-16	NA	38031837	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.18	chr19	-	6676	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	17529	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.4818342625954	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGATGTTTGTCCTCT	8532	False	NA	-5	True	AATAAA	-16	NA	38014270	37887679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37916790_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.19	chr19	-	4677	33	NNC	ENSMUSG00000048612.17	novel	6902	53	NA	NA	10649	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.0463194771504	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	NA	False	NA	-6	True	AATAAA	-15	NA	37944925	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916876_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890
ES.17768.2	chr19	-	6918	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.1745109234177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTTTACATCTTCA	8882	False	NA	NA	False	AATAAA	-25	NA	38031821	37887486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.20	chr19	-	4784	24	NNC	ENSMUSG00000048612.17	novel	6902	53	NA	NA	608	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.6091125651787	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	3162	False	NA	-6	True	AATAAA	-15	NA	37927821	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37916859_37919433_37919526_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747
ES.17768.22	chr19	-	8204	52	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_15	30.4186980883002	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	8856	False	NA	-6	True	AATAAA	-15	NA	38031847	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.23	chr19	-	14184	36	NNC	ENSMUSG00000048612.17	novel	6902	53	NA	NA	-6887	-5	intron_retention	FALSE	canonical	0	0	junction_15	35.2870445093391	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	NA	False	NA	-6	True	AATAAA	-15	NA	37962461	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37917097_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775
ES.17768.24	chr19	-	2479	17	NNC	ENSMUSG00000048612.17	novel	6902	53	NA	NA	8948	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.4625103106945	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	NA	False	NA	-6	True	AATAAA	-15	NA	37919481	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915518_37919433
ES.17768.25	chr19	-	6750	52	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	36.7796936770039	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	8856	False	NA	-6	True	AATAAA	-15	NA	38031847	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913160_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969811_37971403_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.30	chr19	-	6026	48	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	8	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	30.2884278849076	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	8912	False	NA	-6	True	AATAAA	-15	NA	38031791	37887680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909222_37923210_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.31	chr19	-	6802	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.4577701896279	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	8856	False	NA	-7	True	AATAAA	-14	NA	38031847	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941541_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.33	chr19	-	5751	2	NIC	ENSMUSG00000048612.17	novel	631	4	NA	NA	401	-6	intron_retention	FALSE	canonical	3	195	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	NA	False	NA	-7	True	AATAAA	-14	NA	37893871	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37889833_37890271
ES.17768.34	chr19	-	6141	48	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-19583	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.4939185892009	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	NA	False	NA	-7	True	AATAAA	-14	NA	37975157	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913164_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096
ES.17768.35	chr19	-	4701	24	NNC	ENSMUSG00000048612.17	novel	6902	53	NA	NA	-38	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.6069191298938	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	2516	False	NA	-7	True	AATAAA	-14	NA	37928467	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37906159_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292
ES.17768.37	chr19	-	6669	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	17529	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.4818342625954	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	8532	False	NA	-7	True	AATAAA	-14	NA	38014270	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.38	chr19	-	6576	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.4994933903401	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATGGATGTTTGTCCT	8912	False	NA	-7	True	AATAAA	-14	NA	38031791	37887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930755_37931950_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.4	chr19	-	6750	53	NIC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	30.1745109234177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTTTGTCCTCTATT	8856	False	NA	-2	True	AATAAA	-19	NA	38031847	37887676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.40	chr19	-	6752	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	40.374847719866	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACATGGATGTTTGTCC	8847	False	NA	-8	True	AATAAA	-13	NA	38031856	37887682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924290_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956892_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.42	chr19	-	6737	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	36.4245186945576	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACATGGATGTTTGTCC	8882	False	NA	-8	True	AATAAA	-13	NA	38031821	37887682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969802_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.43	chr19	-	6646	52	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.8396047519186	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACATGGATGTTTGTCC	8866	False	NA	-8	True	AATAAA	-13	NA	38031837	37887682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38012789_38012846_38031683
ES.17768.44	chr19	-	6824	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	7438	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.4818342625954	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACATGGATGTTTGTCC	8554	False	NA	-8	True	AATAAA	-13	NA	38024361	37887682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38024180
ES.17768.46	chr19	-	6490	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.1745109234177	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTCCGAGTATTTCTA	8827	False	NA	-2	True	ATTAAA	-25	NA	38031876	37887969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.47	chr19	-	6508	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.0334055731897	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATTTTCCGAGTATTTC	8866	False	NA	-4	True	ATTAAA	-23	NA	38031837	37887971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.48	chr19	-	6458	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.4761563930069	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATTTTCCGAGTATTTC	8866	False	NA	-4	True	ATTAAA	-23	NA	38031837	37887971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939865_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.49	chr19	-	2283	3	ISM	ENSMUSG00000048612.17	ENSMUST00000225159.2	4129	30	63410	2	6	-2	intron_retention	FALSE	canonical	3	195	junction_2	1.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTATTTTCCGAGTATT	NA	False	NA	-6	True	ATTAAA	-21	NA	37892164	37887973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37888216_37889684_37889833_37890271
ES.17768.5	chr19	-	7007	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.0334055731897	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTTTGTCCTCTATT	8662	False	NA	-2	True	AATAAA	-19	NA	38032041	37887676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.50	chr19	-	6462	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	7450	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.495901326169	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTATTTTCCGAGTATT	8566	False	NA	-6	True	ATTAAA	-21	NA	38024349	37887973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38024180
ES.17768.52	chr19	-	6198	51	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-31198	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	40.5810990486951	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTATTTTCCGAGTAT	2939	False	NA	-7	True	ATTAAA	-20	NA	37986772	37887974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913159_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955574_37956773_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663
ES.17768.54	chr19	-	6472	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.5840739598779	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTATTTTCCGAGTAT	8856	False	NA	-7	True	ATTAAA	-20	NA	38031847	37887974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893823_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924687_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.56	chr19	-	6513	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.6782282274375	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTATTTTCCGAGTAT	8882	False	NA	-7	True	ATTAAA	-20	NA	38031821	37887974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924937_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37959399_37959490_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.57	chr19	-	6439	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.9754087320839	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCCTATTTTCCGAGT	8867	False	NA	-9	True	ATTAAA	-18	NA	38031836	37887976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913155_37919426_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956892_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.59	chr19	-	6409	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	30.1745109234177	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTATTTTCCGAG	8903	False	NA	-10	True	ATTAAA	-17	NA	38031800	37887977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913160_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.6	chr19	-	6618	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	17526	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.495901326169	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTTTGTCCTCTATT	8529	False	NA	-2	True	AATAAA	-19	NA	38014273	37887676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.62	chr19	-	3662	29	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	61454	31486	-14771	-11453	internal_fragment	FALSE	canonical	3	104	junction_12	15.9272501053499	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGAAATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	37970345	37919243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325
ES.17768.63	chr19	-	5061	36	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-268	34768	-42	13648	5prime_fragment	FALSE	canonical	3	104	junction_10	14.5019632731403	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATTTTCCATTTCCTT	8636	False	NA	NA	False	TATAAA	-10	NA	38032067	37922525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.64	chr19	-	3682	33	NNC	ENSMUSG00000048612.17	novel	3926	10	NA	NA	-15	10133	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.3946134075661	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAACTTCTGACCTCT	8882	False	NA	NA	False	AATAAA	-9	NA	38031821	37926040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37926192_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.65	chr19	-	3811	32	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	14	10133	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_27	27.1941032354523	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAACTTCTGACCTCT	8870	False	NA	NA	False	AATAAA	-9	NA	38031833	37926040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975261_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.66	chr19	-	3681	32	ISM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	-48	38430	0	9986	5prime_fragment	FALSE	canonical	3	104	junction_6	13.0618475968402	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGGTATGCTTGAAGA	8856	False	NA	NA	False	AATAAA	-20	NA	38031847	37926187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.67	chr19	-	3676	32	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-12	9980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	34.2363396275451	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTCTACTGGTATGCT	8844	False	NA	NA	False	AATAAA	-14	NA	38031859	37926193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956777_37956892_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.68	chr19	-	3536	32	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	17526	9977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	27.7882958465645	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGACTCTACTGGTAT	8529	False	NA	NA	False	AATAAA	-11	NA	38014273	37926196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.69	chr19	-	6773	25	NNC	ENSMUSG00000048612.17	novel	7094	53	NA	NA	-12	3967	intron_retention	FALSE	non_canonical	0	0	junction_10	29.8407811932299	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	8844	False	NA	NA	False	NA	NA	NA	38031859	37932206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37958459_37960274_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.7	chr19	-	6803	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	39.3070450151732	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTTTGTCCTCTATT	8882	False	NA	-2	True	AATAAA	-19	NA	38031821	37887676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905018_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37916785_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.70	chr19	-	4835	27	NNC	ENSMUSG00000048612.17	novel	3066	27	NA	NA	13	522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4230769230769	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTATATCTCATTGGT	8869	False	NA	NA	False	ATTAAA	-17	NA	38031834	37935651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37937674_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975261_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.71	chr19	-	3108	27	FSM	ENSMUSG00000048612.17	ENSMUST00000223650.2	3066	27	-41	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_1	29.2210763281428	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTCTGGTTCACTA	8856	False	NA	NA	False	NA	NA	NA	38031847	37936172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_37936452_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.72	chr19	-	1403	15	ISM	ENSMUSG00000048612.17	ENSMUST00000223650.2	3066	27	-38	26862	3	4826	5prime_fragment	FALSE	canonical	3	129	junction_5	9.2879118278787	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGAGTTGCAAGTGTG	8859	False	NA	NA	False	AATAAA	-15	NA	38031844	37963035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.73	chr19	-	3566	11	NNC	ENSMUSG00000048612.17	novel	3066	27	NA	NA	17527	4556	intron_retention	FALSE	canonical	0	0	junction_10	43.2676553559353	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTTTCTTTTCTTTC	8530	False	NA	NA	False	NA	NA	NA	38014272	37963305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37963375_37966097_37966202_37968796_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38014245
ES.17768.8	chr19	-	6834	54	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	44.1054272719939	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGATGTTTGTCCTCTAT	8844	False	NA	-3	True	AATAAA	-18	NA	38031859	37887677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913166_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956774_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975266_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17768.9	chr19	-	6948	53	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.1745109234177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGATGTTTGTCCTCTA	8660	False	NA	-4	True	AATAAA	-17	NA	38032043	37887678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ES.17769.1	chr19	+	180	1	Intergenic	novelGene_14755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	6350	False	NA	NA	False	NA	NA	NA	38036595	38036775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38036600_38036800
ES.17769.2	chr19	+	292	1	Intergenic	novelGene_14756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATTCAGCCATTGATT	6351	False	NA	NA	False	NA	NA	NA	38036596	38036888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38036600_38036900
ES.1777.1	chr1	+	173	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGAGACAGACAGACAT	NA	False	NA	NA	False	NA	NA	NA	165057495	165057668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165057500_165057700
ES.17770.1	chr19	+	3213	9	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-437	0	intron_retention	FALSE	canonical	3	204	junction_1	54.1548705104167	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043021	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.10	chr19	+	2402	9	FSM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	-36	0	-7	0	multi-exon	FALSE	canonical	3	10	junction_1	113.762636660724	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043451	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38043530_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.11	chr19	+	2578	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.248062764573	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043458	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38046015_38046236_38046457_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.12	chr19	+	4537	9	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_2	96.468178043332	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043458	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38045901_38046236_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.13	chr19	+	2468	10	FSM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	-26	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	104.602716958317	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043458	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38043530_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.14	chr19	+	3137	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	113	junction_2	88.129077919833	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043471	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38060339_38061745
ES.17770.15	chr19	+	2444	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.328960071852	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043475	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38045922_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.16	chr19	+	8235	5	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	299	junction_1	36.7856969486783	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043476	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087
ES.17770.17	chr19	+	3386	8	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-4	1	intron_retention	FALSE	canonical	3	17	junction_2	122.699234067766	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043480	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38060339_38061745
ES.17770.18	chr19	+	2652	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043482	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.19	chr19	+	3913	7	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-2	-1418	intron_retention	FALSE	canonical	3	204	junction_1	61.0327780786685	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTCTTCATTCTTTTTT	NA	False	NA	NA	False	AAAAAG	-14	NA	38043482	38060528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212
ES.17770.2	chr19	+	2614	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-61	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043397	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.20	chr19	+	4760	9	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	17	junction_3	125.440972174166	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043482	38062868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048517_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.21	chr19	+	2680	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_3	116.328879317499	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043485	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38046432_38048528_38048805_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.22	chr19	+	2527	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.840231963066	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043486	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38045991_38046236_38046457_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.23	chr19	+	2671	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	120.180419924933	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGTCTAGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	38043487	38062867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043766_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.24	chr19	+	3112	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	21	311	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	126.834975898256	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCCCAGACTCCTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	38043510	38063182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043829_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.25	chr19	+	2626	10	NNC	ENSMUSG00000024989.16	novel	2683	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	155.974673474356	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043516	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061748
ES.17770.26	chr19	+	2575	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	116.004242918093	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043516	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.27	chr19	+	2717	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	134.292384163974	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043517	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38045991_38046236_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.28	chr19	+	3017	9	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_3	132.06035551974	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043517	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38046432_38048528_38048869_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.29	chr19	+	2953	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	91	junction_1	88.100705871179	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043517	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043766_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.3	chr19	+	2499	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043399	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.30	chr19	+	4832	9	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	17	junction_2	130.780111255496	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043517	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38046015_38046236_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.31	chr19	+	2706	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	103.855669079738	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043517	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.32	chr19	+	5046	8	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	91	junction_1	94.0507895788662	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGTCTAGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	38043517	38062867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043766_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.33	chr19	+	2687	11	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	147.423505588492	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043517	38062868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045508_38045582_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.34	chr19	+	2729	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	29	-1	-18	1	multi-exon	FALSE	canonical	3	91	junction_1	107.147988119351	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043518	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.35	chr19	+	2544	9	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	133.097180191768	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043518	38062868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.36	chr19	+	2740	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	136.421279249605	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043519	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38046015_38046236_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.37	chr19	+	2926	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-17	311	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCCCAGACTCCTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	38043519	38063182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.38	chr19	+	5051	8	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	17	junction_1	119.217516861117	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGTCTAGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	38043519	38062868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.39	chr19	+	5001	8	ISM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	73	-1	24	1	3prime_fragment	FALSE	canonical	3	299	junction_1	30.684703361906	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043560	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.4	chr19	+	2566	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043422	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.40	chr19	+	2538	9	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	2148	-2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	89.6656985697429	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGTCTAGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	38045684	38062867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.41	chr19	+	2400	9	ISM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	2370	0	2318	0	3prime_fragment	FALSE	canonical	3	35	junction_1	105.782722478673	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38045854	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.42	chr19	+	2462	9	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	2318	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	81.2564420523075	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38045854	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.43	chr19	+	2513	9	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	2318	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.330788178715	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38045854	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38045991_38046236_38046432_38048477_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.44	chr19	+	4965	7	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	2318	0	intron_retention	FALSE	canonical	3	17	junction_1	125.792708674055	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38045854	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38046432_38048517_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.45	chr19	+	2485	9	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	2365	-1	2318	1	3prime_fragment	FALSE	canonical	3	96	junction_1	86.5390085452797	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38045854	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.46	chr19	+	2358	9	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	2318	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	133.280718785577	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38045854	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38046015_38046236_38046432_38048654_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.47	chr19	+	5111	5	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	3754	0	intron_retention	FALSE	canonical	3	313	junction_4	32.2751839653936	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38047290	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38048805_38051050_38051120_38057527_38057679_38058087_38060339_38061745
ES.17770.48	chr19	+	3615	6	NIC	ENSMUSG00000024989.16	novel	2366	9	NA	NA	4126	-2	intron_retention	FALSE	canonical	3	313	junction_5	28.8762878500683	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTGTCTAGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	38047662	38062867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38060339_38061745
ES.17770.5	chr19	+	2363	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	146.352663251532	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043423	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38046236_38046432_38048528_38048805_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.50	chr19	+	7978	6	NNC	ENSMUSG00000024989.16	novel	2366	9	NA	NA	7565	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.43898244185	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	38051101	38062872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38055045_38055279_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.51	chr19	+	9143	4	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	8137	0	intron_retention	FALSE	non_canonical	0	0	junction_1	152.482421573403	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38051673	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38055048_38055284_38057679_38058087_38060339_38061745
ES.17770.52	chr19	+	5117	5	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	11046	1	intron_retention	FALSE	non_canonical	0	0	junction_1	145.063779076653	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38054582	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38055045_38055279_38057679_38058087_38058399_38059518_38060339_38061745
ES.17770.53	chr19	+	5523	2	NIC	ENSMUSG00000024989.16	novel	2366	9	NA	NA	12690	0	intron_retention	FALSE	canonical	3	354	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	1160	False	NA	NA	False	AATAAA	-16	NA	38056226	38062869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38058399_38059518
ES.17770.6	chr19	+	2600	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	125.402463204587	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043423	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.7	chr19	+	4907	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-35	1	intron_retention	FALSE	canonical	3	204	junction_1	56.8951775152323	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043423	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.8	chr19	+	5048	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	204	junction_1	55.6505129521439	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043432	38062871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38046432_38048528_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ES.17770.9	chr19	+	6916	6	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	-15	1	intron_retention	FALSE	canonical	3	204	junction_1	66.793412848873	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTAGTATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	38043443	38062870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38043530_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518
ES.17771.1	chr19	+	1422	3	FSM	ENSMUSG00000054200.8	ENSMUST00000067098.8	1401	3	-22	1	-22	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATCTCTATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	38085496	38102710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38086142_38095829_38095959_38102062
ES.17772.1	chr19	-	994	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	-50	-7	-50	6	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTTGAAGACTTATTT	5159	False	NA	2	True	ATTAAA	-20	NA	38113326	38105070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
ES.17772.2	chr19	-	536	3	NNC	ENSMUSG00000024990.14	novel	1161	6	NA	NA	4532	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATGAGTTGAAGACTT	9844	False	NA	-2	True	ATTAAA	-16	NA	38108641	38105074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38105358_38106719_38106933_38108601
ES.17772.3	chr19	-	2278	5	NIC	ENSMUSG00000024990.14	novel	937	6	NA	NA	21	0	intron_retention	FALSE	canonical	3	6	junction_4	4.15331193145904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCCTATGAGTTGAAGA	5230	False	NA	-5	True	ATTAAA	-13	NA	38113255	38105077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
ES.17773.1	chr19	-	3465	13	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-11	-4	7	4	intron_retention	FALSE	canonical	3	295	junction_2	36.707931325835	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTTTCCTTTCA	NA	False	NA	-3	True	AATAAA	-24	NA	38212597	38176924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
ES.17773.10	chr19	-	3274	13	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_5	99.8785373452286	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212575	38176928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38190038_38193143_38193253_38195690_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.11	chr19	-	1345	14	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	126.938600449287	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212538	38176928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207947_38208077_38208176_38210290_38210362_38212409
ES.17773.13	chr19	-	1541	14	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	99.0039745780366	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTCAGAGTCTTTCC	NA	False	NA	-8	True	AATAAA	-19	NA	38212567	38176929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210521_38212409
ES.17773.15	chr19	-	3413	15	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	11	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	144.510874529022	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAATGTCAGAGTCT	NA	False	NA	-12	True	AATAAA	-15	NA	38212575	38176933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38196461_38196513_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208077_38208176_38210284_38210362_38212409
ES.17773.16	chr19	-	3014	15	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	38	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	125.605167741082	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAATGTCAGAGTCT	NA	False	NA	-12	True	AATAAA	-15	NA	38212548	38176933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38196010_38196432_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.17	chr19	-	3254	13	NIC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	11	-5	intron_retention	FALSE	canonical	3	295	junction_2	36.1158437069753	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAATGTCAGAGTCT	NA	False	NA	-12	True	AATAAA	-15	NA	38212575	38176933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.19	chr19	-	3751	14	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	49	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	130.076036024815	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCTAAAATGTCAGAGT	NA	False	NA	-14	True	AATAAA	-13	NA	38212537	38176935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212082
ES.17773.20	chr19	-	962	9	ISM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	3	16052	3	10	5prime_fragment	FALSE	canonical	3	315	junction_8	31.196954979613	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTATGGAAGCGCTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	38212583	38192980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.21	chr19	-	3017	8	ISM	ENSMUSG00000054237.7	ENSMUST00000238007.2	1010	9	5	-1	5	1	intron_retention	FALSE	canonical	3	330	junction_2	26.687916703242	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTTAGCATTATGGA	NA	False	NA	NA	False	AATAAA	-11	NA	38212599	38192989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
ES.17773.22	chr19	-	967	9	NNC	ENSMUSG00000054237.7	novel	1010	9	NA	NA	52	1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	129.177203871271	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTTAGCATTATGGA	NA	False	NA	NA	False	AATAAA	-11	NA	38212534	38192989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38193258_38195710_38195757_38201808_38201894_38202821_38202902_38204274_38204356_38207905_38207952_38208079_38208176_38210284_38210425_38212409
ES.17773.23	chr19	-	2970	9	NNC	ENSMUSG00000054237.7	novel	1010	9	NA	NA	49	-2477	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	179.646006078621	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGCTTGATTATCAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	38212537	38195467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38196513_38196565_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210425_38212409
ES.17773.24	chr19	-	3019	8	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	6	-2479	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	128.154880786444	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTGCTTGATTATCAA	NA	False	NA	NA	False	ATTAAA	-16	NA	38212598	38195469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.25	chr19	-	2933	9	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	21	-2479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.077463210288	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTGCTTGATTATCAA	NA	False	NA	NA	False	ATTAAA	-16	NA	38212565	38195469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38196513_38196565_38197835_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.26	chr19	-	214	1	Intergenic	novelGene_14757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAGGAATTTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	38203862	38203648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38203600_38203900
ES.17773.27	chr19	-	6514	1	FSM	ENSMUSG00000054237.7	ENSMUST00000238154.2	1884	1	-19	-4611	-1	4611	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	38212605	38206091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38206100_38212600
ES.17773.3	chr19	-	6887	15	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	17	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	126.107501921243	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTTTCCTTTCA	NA	False	NA	-3	True	AATAAA	-24	NA	38212569	38176924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38196642_38196693_38201307_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.4	chr19	-	1439	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	-37	0	-19	0	multi-exon	FALSE	canonical	3	295	junction_2	36.3583414649629	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212623	38176928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ES.17773.6	chr19	-	7204	11	NIC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	112.508488568641	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212595	38176928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38177249_38184144_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284
ES.17773.9	chr19	-	1484	14	NNC	ENSMUSG00000054237.7	novel	1402	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_13	98.2574206360984	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212605	38176928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210425_38212409
ES.17774.1	chr19	-	1010	3	Intergenic	novelGene_14758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATTGGTTATTGGCCT	NA	False	NA	NA	False	NA	NA	NA	38248811	38245281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38245562_38245669_38246370_38248781
ES.17774.2	chr19	-	3235	1	Intergenic	novelGene_14759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGCCACTGGTCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	38248853	38245618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38245600_38248900
ES.17775.1	chr19	+	2202	8	FSM	ENSMUSG00000067242.12	ENSMUST00000198518.5	7780	8	169	5409	34	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATCCCAAAGGTAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	38253152	38295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38253546_38254022_38254095_38272417_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608_38289774_38294067
ES.17776.1	chr19	-	4185	12	NNC	ENSMUSG00000105709.2	novel	1254	6	NA	NA	6664	35547	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.862439361864103	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGAGGCCCTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	38297039	38252983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38253185_38256875_38256973_38257691_38257780_38260695_38260785_38260979_38262755_38262951_38264267_38272318_38272557_38276165_38276222_38278703_38278779_38285306_38285380_38289632_38289722_38296950
ES.17776.2	chr19	-	1144	10	NNC	ENSMUSG00000105709.2	novel	1254	6	NA	NA	5954	35547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.916245694581702	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGAGGCCCTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	38297749	38252983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38253185_38255306_38255363_38256548_38256630_38256875_38256973_38257691_38257777_38260695_38260785_38260979_38261029_38264052_38264267_38296950_38297069_38297595
ES.17777.1	chr19	+	172	1	ISM	ENSMUSG00000067242.12	ENSMUST00000198518.5	7780	8	46392	1115	45518	-1115	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	38299375	38299547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38299400_38299500
ES.17778.1	chr19	-	3473	1	Intergenic	novelGene_14760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGTCTGCCTTAAATTC	NA	False	NA	NA	False	AAAAAG	-18	NA	38311581	38308108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38308100_38311600
ES.17779.1	chr19	-	1470	1	Intergenic	novelGene_14761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38314441	38312971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38313000_38314400
ES.1778.1	chr1	-	2254	8	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	1	14172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.971675494694	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCACAGACCGCCATT	NA	False	NA	NA	False	NA	NA	NA	165064490	165025682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165025701_165041976_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.10	chr1	-	1800	7	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	135	659	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	205.646136198406	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAGTTTGCTGTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	165064356	165042491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064085
ES.1778.11	chr1	-	5351	7	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-9	658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	216.539449831511	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATAGTTTGCTGTTTA	NA	False	NA	-7	True	AATAAA	-16	NA	165064521	165042492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165051473_165055174_165055836_165056017_165064298
ES.1778.12	chr1	-	3930	6	ISM	ENSMUSG00000040843.11	ENSMUST00000192436.6	1103	8	6147	-802	5664	658	intron_retention	FALSE	canonical	3	508	junction_2	35.7849130221103	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATAGTTTGCTGTTTA	NA	False	NA	-7	True	AATAAA	-16	NA	165058418	165042492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836
ES.1778.16	chr1	-	1572	6	NIC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-4	637	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	235.615279640349	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAATAAGGAATTAT	NA	False	NA	-28	True	NA	NA	NA	165064495	165042513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165043450_165045351_165045415_165047667_165047764_165055073_165055174_165055836_165056017_165064298
ES.1778.17	chr1	-	1482	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-15	2913	-15	383	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTTTGTCTCTGAG	NA	False	NA	NA	False	TTTAAA	-11	NA	165064527	165042767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.18	chr1	-	1120	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-37	3297	16	-1	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGTTTATCCTGTCTG	NA	False	NA	-2	True	AATAAA	-27	NA	165064549	165043151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.19	chr1	-	2041	7	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.773954281045	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTGTTTATCCTGTCT	NA	False	NA	-3	True	AATAAA	-26	NA	165064477	165043152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165044444_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.2	chr1	-	1526	8	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	0	665	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	204.632672396773	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCTGTTTATTTCAGC	NA	False	NA	0	True	AATAAA	-23	NA	165064491	165042485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165043124_165043325_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.3	chr1	-	1787	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	-40	2633	13	663	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTGCTGTTTATTTCA	NA	False	NA	-2	True	AATAAA	-21	NA	165064552	165042487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.4	chr1	-	3648	6	NIC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	1	663	intron_retention	FALSE	canonical	3	508	junction_1	56.1690306129632	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTGCTGTTTATTTCA	NA	False	NA	-2	True	AATAAA	-21	NA	165064511	165042487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ES.1778.6	chr1	-	4087	6	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-14	659	intron_retention	FALSE	canonical	2	2	junction_4	234.838157035862	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAGTTTGCTGTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	165064526	165042491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165043450_165045351_165045415_165047667_165050230_165055073_165055174_165055840_165056017_165064298
ES.1778.7	chr1	-	4650	1	FSM	ENSMUSG00000040843.11	ENSMUST00000192726.2	946	1	-3045	-659	-3045	659	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAGTTTGCTGTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	165047141	165042491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165042500_165047100
ES.1778.8	chr1	-	1529	5	NIC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-14	659	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	261.926874337094	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAGTTTGCTGTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	165064526	165042491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165043450_165045351_165045415_165055073_165055174_165055836_165056017_165064298
ES.1778.9	chr1	-	1706	7	NNC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	-2	659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	206.750050382904	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAGTTTGCTGTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	165064493	165042491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064316
ES.17780.1	chr19	+	159	1	Intergenic	novelGene_14762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	38317051	38317210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38317100_38317200
ES.17781.1	chr19	-	150	1	Intergenic	novelGene_14763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACACTTAACTTTAT	3060	False	NA	NA	False	NA	NA	NA	38322932	38322782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38322800_38322900
ES.17782.1	chr19	+	179	1	Intergenic	novelGene_14764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	38326715	38326894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38326700_38326900
ES.17783.1	chr19	-	1974	3	Intergenic	novelGene_14765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTCTGGAGTATGAT	NA	False	NA	NA	False	AATAAA	-18	NA	38378508	38353517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38355132_38372379_38372622_38378390
ES.17783.2	chr19	-	1566	1	Genic_Genomic	ENSMUSG00000117920.2	novel	NA	NA	NA	NA	-1176	-559	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCTGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	38375138	38373572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_38373600_38375100
ES.17783.3	chr19	-	1112	2	NNC	ENSMUSG00000118335.2	novel	596	2	NA	NA	-1955	921	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTCTTTTATTTCTC	NA	False	NA	NA	False	AATAAA	-11	NA	38378506	38374489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38375486_38378390
ES.17784.1	chr19	+	3904	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-425	-5	-425	5	multi-exon	FALSE	canonical	3	381	junction_1	3	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACGACTCGTTTCTC	NA	False	NA	40	True	AATAAA	-41	NA	38384002	38394063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38384750_38388881_38389063_38391087
ES.17784.10	chr19	+	3106	4	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	181.035908040366	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCACGACTCGTTTCT	NA	False	NA	39	True	AATAAA	-40	NA	38384492	38394062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38389063_38391087_38391955_38392261
ES.17784.11	chr19	+	3374	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	190.5	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAAAGTGTCTCACGAC	NA	False	NA	31	True	AATAAA	-32	NA	38384499	38394054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38389039_38391087
ES.17784.12	chr19	+	5206	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	190.5	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGTCTCACGACTCG	NA	False	NA	34	True	AATAAA	-35	NA	38384501	38394057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38390206_38390423
ES.17784.13	chr19	+	5420	2	FSM	ENSMUSG00000044026.4	ENSMUST00000236865.2	1610	2	17	-3827	17	-1	multi-exon	FALSE	canonical	3	381	junction_1	0	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGTCTCACGACTCG	NA	False	NA	34	True	AATAAA	-35	NA	38384505	38394057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38384750_38388881
ES.17784.14	chr19	+	3270	4	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	181.035908040366	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAGTGTCTCACGACTC	NA	False	NA	33	True	AATAAA	-34	NA	38384509	38394056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38389063_38391087_38392382_38392501
ES.17784.15	chr19	+	3171	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	44	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	190.5	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGGGTTTTACAACTA	NA	False	NA	13	True	AATAAA	-14	NA	38384532	38394036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38388953_38391153
ES.17784.16	chr19	+	1128	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	125	2221	64	1607	multi-exon	FALSE	canonical	3	381	junction_1	3	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGGTTTTTATTTT	NA	False	NA	NA	False	AATGAA	-11	NA	38384552	38391837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38384750_38388881_38389063_38391087
ES.17784.18	chr19	+	3449	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	429	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.5	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGTCTCACGACTCG	NA	False	NA	34	True	AATAAA	-35	NA	38384917	38394057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38385288_38388953_38389063_38391087
ES.17784.19	chr19	+	6901	2	NNC	ENSMUSG00000044026.4	novel	1610	2	NA	NA	2429	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGGGTTTTACAACTA	NA	False	NA	13	True	AATAAA	-14	NA	38386917	38394036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38390206_38390423
ES.17784.2	chr19	+	1610	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-229	2093	-229	1735	multi-exon	FALSE	canonical	3	381	junction_1	3	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTGCGTTTTTAGT	NA	False	NA	NA	False	CATAAA	-12	NA	38384198	38391965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38384750_38388881_38389063_38391087
ES.17784.20	chr19	+	7010	1	Genic_Genomic	ENSMUSG00000044026.4	novel	NA	NA	NA	NA	6613	4053	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTTGTTCATTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	38391101	38398111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_38391100_38398100
ES.17784.3	chr19	+	3523	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-226	4	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCACGACTCGTTTCT	NA	False	NA	39	True	AATAAA	-40	NA	38384201	38394062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38384750_38391087
ES.17784.4	chr19	+	3614	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-208	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	189.5	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCACGACTCGTTTCT	NA	False	NA	39	True	AATAAA	-40	NA	38384219	38394062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388953_38389063_38391087
ES.17784.5	chr19	+	2622	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	-189	1041	-189	-1041	multi-exon	FALSE	canonical	3	381	junction_1	3	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGGTATGTTATAATGC	NA	False	NA	NA	False	AATAAA	-22	NA	38384238	38393017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38384750_38388881_38389063_38391087
ES.17784.7	chr19	+	3396	4	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	-26	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	181.035908040366	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCACGACTCGTTTCT	NA	False	NA	39	True	AATAAA	-40	NA	38384462	38394062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38389063_38391087_38392418_38392464
ES.17784.8	chr19	+	3289	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	190.5	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCACGACTCGTTTCT	NA	False	NA	39	True	AATAAA	-40	NA	38384492	38394062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38384750_38388881_38389005_38391153
ES.17785.1	chr19	-	184	1	Intergenic	novelGene_14766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38387031	38386847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38386800_38387000
ES.17786.1	chr19	+	157	1	Intergenic	novelGene_14767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	38454029	38454186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38454000_38454200
ES.17787.1	chr19	+	126	1	Intergenic	novelGene_14768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCTGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38455052	38455178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38455100_38455200
ES.17788.1	chr19	+	2115	3	NNC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	-146	35612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGAATTCCCT	NA	False	NA	NA	False	NA	NA	NA	38469410	38548122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38469805_38512358_38513897_38547939
ES.17788.10	chr19	+	7835	32	FSM	ENSMUSG00000024998.18	ENSMUST00000169713.9	9439	32	206	1398	194	44	multi-exon	FALSE	canonical	1	8	junction_10	4.96145391734978	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATAGTGTGATCTTCAT	NA	False	NA	NA	False	AATAAA	-34	NA	38512846	38772076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.11	chr19	+	7193	32	NNC	ENSMUSG00000024998.18	novel	9439	32	NA	NA	209	164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.30114866557862	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTGGAACCTCAGAGA	NA	False	NA	1	True	NA	NA	NA	38512861	38771403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710257_38710413_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.12	chr19	+	5688	25	ISM	ENSMUSG00000024998.18	ENSMUST00000169713.9	9439	32	221	17614	209	-15379	5prime_fragment	FALSE	canonical	1	8	junction_10	4.93129884851175	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGCCAGGGCGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	38512861	38755860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575
ES.17788.13	chr19	+	6366	29	ISM	ENSMUSG00000024998.18	ENSMUST00000169713.9	9439	32	249	6903	237	-4668	5prime_fragment	FALSE	canonical	1	8	junction_10	4.65259966830044	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATATATGTGCATTGA	NA	False	NA	NA	False	TATAAA	-13	NA	38512889	38766571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300
ES.17788.14	chr19	+	2938	4	NNC	ENSMUSG00000024998.18	novel	9439	32	NA	NA	274	47838	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.9536140513607	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGATCTAGTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	38512926	38688289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38513897_38608886_38609176_38640238_38640556_38686927
ES.17788.15	chr19	+	4850	21	ISM	ENSMUSG00000024998.18	ENSMUST00000169713.9	9439	32	319	34343	307	-436	5prime_fragment	FALSE	canonical	1	8	junction_10	5.23712707502883	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCGACTTTTCATAATA	NA	False	NA	NA	False	AATAAA	-16	NA	38512959	38739131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884
ES.17788.16	chr19	+	6894	31	NNC	ENSMUSG00000024998.18	novel	9439	32	NA	NA	397	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	7.32757349559411	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCAGAGAGTTTTCACG	NA	False	NA	10	True	NA	NA	NA	38513049	38771412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710413_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726370_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.17	chr19	+	6657	25	NNC	ENSMUSG00000024998.18	novel	9439	32	NA	NA	786	-13686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.14579802249743	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATGATGAATGTTT	NA	False	NA	NA	False	AATGAA	-6	NA	38513438	38757553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690376_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575
ES.17788.18	chr19	+	2827	10	NIC	ENSMUSG00000024998.18	novel	6769	22	NA	NA	23938	36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.74277839563749	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAGAGCCATAGTGTG	NA	False	NA	NA	False	AATAAA	-26	NA	38747295	38772068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.19	chr19	+	4271	10	NNC	ENSMUSG00000024998.18	novel	6769	22	NA	NA	25063	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.68034207057131	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGCCCACCACCATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	38748420	38773477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758919_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.2	chr19	+	8021	33	FSM	ENSMUSG00000024998.18	ENSMUST00000182481.8	8357	33	-127	463	-115	172	multi-exon	FALSE	canonical	1	8	junction_11	5.14743564797074	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTCAGAGAGTTTTCAC	NA	False	NA	9	True	NA	NA	NA	38469441	38771411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.20	chr19	+	2538	3	ISM	ENSMUSG00000024998.18	ENSMUST00000182589.8	6769	22	56386	-34	43842	34	3prime_fragment	FALSE	canonical	3	22	junction_2	3.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGCAGAGCCATAGTG	NA	False	NA	NA	False	AATAAA	-24	NA	38767199	38772066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38768429_38769003_38769227_38770980
ES.17788.3	chr19	+	2363	3	NNC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	-72	35608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAAAAACAGAATT	NA	False	NA	NA	False	NA	NA	NA	38469484	38548118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38469805_38512358_38513897_38547613
ES.17788.4	chr19	+	6657	25	NIC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	-51	-12927	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	6.22662294774088	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCAGACTCCCTCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	38469505	38758312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894
ES.17788.6	chr19	+	9627	33	FSM	ENSMUSG00000024998.18	ENSMUST00000182481.8	8357	33	-28	-1242	-16	-358	multi-exon	FALSE	canonical	1	8	junction_11	5.14743564797074	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTGTCACAGGAATGTG	NA	False	NA	NA	False	AATAAA	-26	NA	38469540	38773116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.7	chr19	+	5746	20	NNC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	1	-10725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	6.9978231676624	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATAACCATCTTGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	38469557	38728842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705056_38705500_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691
ES.17788.8	chr19	+	8103	34	NNC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	3	166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.66721760808876	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGAACCTCAGAGAGT	NA	False	NA	3	True	NA	NA	NA	38469559	38771405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38469805_38494762_38494969_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ES.17788.9	chr19	+	3772	9	NNC	ENSMUSG00000024998.18	novel	8357	33	NA	NA	5	-32719	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.07677998957505	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTCGGGCTTTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	38469573	38706848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38706738
ES.17789.1	chr19	-	178	1	Intergenic	novelGene_14769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTTACTTCA	NA	False	NA	NA	False	NA	NA	NA	38531565	38531387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38531400_38531600
ES.1779.1	chr1	+	651	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTATTTTCTGTTTGTGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	165064679	165065330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165064700_165065300
ES.17790.1	chr19	+	1479	1	Antisense	novelGene_ENSMUSG00000024999.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGTAGTGAGAATTTGA	NA	False	NA	NA	False	AATAAA	-29	NA	38782912	38784391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_38782900_38784400
ES.17791.1	chr19	+	3764	1	Antisense	novelGene_ENSMUSG00000024999.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATATACCTTTAACTA	NA	False	NA	NA	False	NA	NA	NA	38794676	38798440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_38794700_38798400
ES.17791.2	chr19	+	3454	2	Antisense	novelGene_ENSMUSG00000024999.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATATACCTTTAACTA	NA	False	NA	NA	False	NA	NA	NA	38794676	38798440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_38795658_38795967
ES.17792.1	chr19	-	3993	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	-6	-10	-6	10	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGAGGTTTTGTTTGTTT	2282	False	NA	NA	False	AATAAA	-27	NA	38807687	38776561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.12	chr19	-	3384	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	51	542	51	-542	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTCATTGGCTCTTG	2339	False	NA	NA	False	GATAAA	-16	NA	38807630	38777113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.13	chr19	-	3509	22	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	31	-546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	81.3982399649265	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCTTGTTCATTGGCT	2319	False	NA	NA	False	GATAAA	-12	NA	38807650	38777117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792191_38792301_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.14	chr19	-	3278	21	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	24	-547	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	56.7699524396489	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCTTGTTCATTGGC	2312	False	NA	NA	False	GATAAA	-11	NA	38807657	38777118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783470_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.15	chr19	-	2977	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	2	998	2	-998	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTTTTTTTTTATTT	2290	False	NA	0	True	AATAAA	-29	NA	38807679	38777569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.16	chr19	-	3360	19	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	23	-1000	intron_retention	FALSE	canonical	3	233	junction_1	19.5899319064351	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTTTTTTTTTTTTAT	2311	False	NA	-2	True	AATAAA	-27	NA	38807658	38777571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784314_38787341_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.17	chr19	-	3387	19	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	-1	-1003	intron_retention	FALSE	canonical	3	233	junction_1	19.3385210153654	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCATGGTTTTTTTTTTT	2287	False	NA	-5	True	AATAAA	-24	NA	38807682	38777574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.18	chr19	-	3139	19	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	1091	-1005	intron_retention	FALSE	canonical	3	233	junction_1	17.6230243617354	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	3379	False	NA	-7	True	AATAAA	-22	NA	38806590	38777576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381
ES.17792.19	chr19	-	2907	20	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	14	-1005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.4325169808539	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	2302	False	NA	-7	True	AATAAA	-22	NA	38807667	38777576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783600_38784062_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.2	chr19	-	3657	19	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	56	6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	64.4925108103048	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTACGAGGTTTTGTTT	2344	False	NA	NA	False	AATAAA	-23	NA	38807625	38776565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782662_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.20	chr19	-	2865	20	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	35	-1005	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	63.4325169808539	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	2323	False	NA	-7	True	AATAAA	-22	NA	38807646	38777576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.21	chr19	-	3485	20	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	32	-1005	intron_retention	FALSE	canonical	0	0	junction_4	63.5438644928166	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	2320	False	NA	-7	True	AATAAA	-22	NA	38807649	38777576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783202_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.23	chr19	-	4636	11	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	12124	-1006	intron_retention	FALSE	canonical	3	233	junction_1	14.911740341087	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTCATGGTTTTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	38795557	38777577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38787443_38787753_38787835_38792842_38792975_38795530
ES.17792.3	chr19	-	3888	20	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	63.4325169808539	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTTACGAGGTTT	2306	False	NA	NA	False	AATAAA	-18	NA	38807663	38776570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.4	chr19	-	4640	16	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	24	0	intron_retention	FALSE	canonical	1	1	junction_11	70.6872925873762	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2312	False	NA	NA	False	AATAAA	-17	NA	38807657	38776571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38784314_38787341_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.5	chr19	-	4043	20	NIC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	29	0	intron_retention	FALSE	canonical	3	233	junction_1	19.1293888560388	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2317	False	NA	NA	False	AATAAA	-17	NA	38807652	38776571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.6	chr19	-	3833	21	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	56.7699524396489	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTAGTCTTACGAGGT	2303	False	NA	NA	False	AATAAA	-16	NA	38807666	38776572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783470_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.7	chr19	-	3924	21	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.8311342772981	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTAGTCTTACGAGGT	2319	False	NA	NA	False	AATAAA	-16	NA	38807650	38776572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783470_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787550_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17792.8	chr19	-	4312	19	NNC	ENSMUSG00000024999.8	novel	3977	21	NA	NA	53	-1	intron_retention	FALSE	canonical	0	0	junction_14	64.903346943316	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTAGTCTTACGAGGT	2341	False	NA	NA	False	AATAAA	-16	NA	38807628	38776572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784146_38784240_38784314_38787341_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800917_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ES.17793.1	chr19	+	3842	12	NNC	ENSMUSG00000048720.9	novel	4209	13	NA	NA	-8	215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.3966792321562	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAATTATGAGAAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	38825014	38908097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887310_38887431_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.10	chr19	+	5415	5	ISM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	104	16727	6	-16242	intron_retention	FALSE	canonical	3	30	junction_1	1.22474487139159	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAGAAGGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	38825126	38891640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312
ES.17793.100	chr19	+	6062	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	51	-585	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_10	399.295013663467	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTTAATTTTCTTT	NA	False	NA	3	True	AATAAA	-14	NA	38919409	38958910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38936143_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.101	chr19	+	2763	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	53	-2773	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	423.93349972415	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGTCACATTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	38919411	38956722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.102	chr19	+	2750	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	53	-586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	406.54290522262	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTGTTAATTTTCTT	NA	False	NA	2	True	AATAAA	-13	NA	38919411	38958909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38958655
ES.17793.103	chr19	+	2508	18	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	53	-2778	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	573.217876172764	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919411	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38933834_38934018_38935168_38935313_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.104	chr19	+	6340	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	53	415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.967329555786	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTATATTGTCAAT	NA	False	NA	15	True	AATAAA	-18	NA	38919411	38959910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919630_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.105	chr19	+	5706	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	54	-2778	intron_retention	FALSE	canonical	3	1554	junction_5	128.23588894415	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919412	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.106	chr19	+	2414	11	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	54	19555	54	1021	5prime_fragment	FALSE	canonical	3	1554	junction_5	166.934388308701	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTTCCTGTTTCATA	NA	False	NA	NA	False	AATAAA	-21	NA	38919412	38939940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631
ES.17793.107	chr19	+	6365	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-54	415	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	400.999024546288	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTATATTGTCAAT	NA	False	NA	15	True	AATAAA	-18	NA	38919419	38959910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.108	chr19	+	3200	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-48	-2772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	542.106615682229	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38919425	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935140_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.11	chr19	+	3535	1	Intergenic	novelGene_14771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTTGTTGTGGTGTT	2160	False	NA	NA	False	NA	NA	NA	38838863	38842398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38838900_38842400
ES.17793.111	chr19	+	6078	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-35	413	combination_of_known_splicesites	FALSE	canonical	2	19	junction_2	415.351835797075	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	NA	False	NA	13	True	AATAAA	-16	NA	38919438	38959908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.112	chr19	+	4467	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-35	-2771	intron_retention	FALSE	canonical	3	1554	junction_5	141.919792488574	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919438	38956724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.113	chr19	+	6651	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-31	552	intron_retention	FALSE	canonical	3	1554	junction_4	146.69625080417	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGTGTTTATCATT	NA	False	NA	NA	False	AAGAAA	-17	NA	38919442	38960047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.114	chr19	+	7055	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-30	-2774	intron_retention	FALSE	non_canonical	0	0	junction_13	550.861951853638	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919443	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919663_38919834_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943355_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.115	chr19	+	6336	21	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	260	-413	1	413	3prime_fragment	FALSE	canonical	3	1554	junction_4	146.69625080417	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	NA	False	NA	13	True	AATAAA	-16	NA	38919618	38959908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.116	chr19	+	5315	21	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	292	576	33	-576	3prime_fragment	FALSE	canonical	3	1554	junction_4	146.69625080417	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTTTTTGAGAAGC	NA	False	NA	12	True	AATAAA	-23	NA	38919650	38958919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.117	chr19	+	2956	21	NNC	ENSMUSG00000025001.12	novel	868	4	NA	NA	253	-2774	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	418.9677642731	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38920086	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38920232_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.118	chr19	+	8957	18	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-469	-2772	intron_retention	FALSE	canonical	3	1554	junction_3	146.938515494203	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38922482	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.119	chr19	+	4838	19	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	7489	626	3896	-626	3prime_fragment	FALSE	canonical	3	1554	junction_2	149.636926848099	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAATTGTTTTATTCT	NA	False	NA	-38	True	AATATA	-18	NA	38926847	38958869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.12	chr19	+	3895	29	Fusion	ENSMUSG00000048720.9_ENSMUSG00000025001.12	novel	868	4	NA	NA	-19658	-2774	multi-exon	FALSE	canonical	0	0	junction_6	816.507873288958	1580	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38899700	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_38899789_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314_38906417_38910280_38910371_38918964_38919077_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.120	chr19	+	5270	15	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-3094	-2771	intron_retention	FALSE	canonical	3	1556	junction_1	127.33524769726	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38929038	38956724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38929106_38930897_38932386_38933834_38934018_38935168_38935313_38938631_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.121	chr19	+	4746	17	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	9680	624	-3094	-624	3prime_fragment	FALSE	canonical	3	1556	junction_1	142.505208238155	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATTGTTTTATTCTTT	NA	False	NA	-36	True	AATATA	-20	NA	38929038	38958871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.122	chr19	+	212	1	Intergenic	novelGene_14774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGATTTTTTTAAAAAT	10	False	NA	NA	False	NA	NA	NA	38931404	38931616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38931400_38931600
ES.17793.123	chr19	+	5112	15	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	12370	581	-404	-581	3prime_fragment	FALSE	canonical	3	1637	junction_4	114.586501502274	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAATTTTCTTTTTGA	334	False	NA	7	True	AATAAA	-18	NA	38931728	38958914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.124	chr19	+	7225	12	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	15909	-222	3135	222	intron_retention	FALSE	canonical	3	1637	junction_2	101.771986273643	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGATTTGCTGTTGA	3873	False	NA	NA	False	NA	NA	NA	38935267	38959717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850
ES.17793.125	chr19	+	3723	1	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	3378	314	mono-exon	FALSE	NA	NA	NA	NA	NA	1409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGTCAAAGTAAAACGTGA	4116	False	NA	NA	False	AATAAA	-40	NA	38935510	38939233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38935500_38939200
ES.17793.126	chr19	+	5312	13	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	3822	415	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_1	510.540046312617	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTATATTGTCAAT	4560	False	NA	15	True	AATAAA	-18	NA	38935954	38959910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38936143_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.127	chr19	+	5839	11	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	4042	-2774	intron_retention	FALSE	canonical	3	54	junction_2	548.778789677589	1534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	4780	False	NA	14	True	AATAAA	-15	NA	38936174	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38940376_38941986_38942149_38943137_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.128	chr19	+	5121	12	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	6497	413	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	523.423488926825	1575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	7235	False	NA	13	True	AATAAA	-16	NA	38938629	38959908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38938829_38940278_38940376_38941986_38942149_38943137_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.129	chr19	+	5448	10	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	7134	-584	intron_retention	FALSE	canonical	3	1740	junction_1	78.1352104438909	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTAATTTTCTTTT	7872	False	NA	4	True	AATAAA	-15	NA	38939266	38958911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.13	chr19	+	217	1	Intergenic	novelGene_14773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTGCTGCTCTATAC	NA	False	NA	NA	False	NA	NA	NA	38911638	38911855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_38911600_38911900
ES.17793.130	chr19	+	4647	11	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	20202	583	7428	-583	3prime_fragment	FALSE	canonical	3	1740	junction_1	74.2444610728639	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	8166	False	NA	5	True	AATAAA	-16	NA	38939560	38958912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.131	chr19	+	2984	11	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	8438	-2772	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	567.435846594133	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	9176	False	NA	16	True	AATAAA	-17	NA	38940570	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38940703_38940777_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.132	chr19	+	3559	8	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	9002	-2777	intron_retention	FALSE	canonical	3	1745	junction_5	68.5749999069989	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGATCTGGTCACATTAT	9740	False	NA	11	True	AATAAA	-12	NA	38941134	38956718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.133	chr19	+	5449	8	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	21778	2778	9004	-2778	intron_retention	FALSE	canonical	3	1745	junction_7	54.2744349184244	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	9742	False	NA	10	True	AATAAA	-11	NA	38941136	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040
ES.17793.134	chr19	+	2224	9	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	9980	-2778	intron_retention	FALSE	canonical	3	1745	junction_7	57.2494541458694	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38942112	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953928_38956176
ES.17793.135	chr19	+	2361	9	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	22895	2773	10121	-2773	3prime_fragment	FALSE	canonical	3	1745	junction_6	68.1317657190829	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGTCACATTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	38942253	38956722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.136	chr19	+	3285	9	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	23861	883	11087	-883	3prime_fragment	FALSE	canonical	3	1745	junction_6	68.1317657190829	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCATTGTATTGCTTG	NA	False	NA	NA	False	AAAACA	-16	NA	38943219	38958612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.137	chr19	+	4355	5	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	24034	7453	11260	-7453	internal_fragment	FALSE	canonical	3	1849	junction_3	10.7470926301023	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	38943392	38952042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112
ES.17793.138	chr19	+	4305	6	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	26281	-413	13507	413	3prime_fragment	FALSE	canonical	3	1745	junction_3	80.6657300221104	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	NA	False	NA	13	True	AATAAA	-16	NA	38945639	38959908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.139	chr19	+	4809	1	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	21971	-583	mono-exon	FALSE	NA	NA	NA	NA	NA	1545	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	512	False	NA	5	True	AATAAA	-16	NA	38954103	38958912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38954100_38958900
ES.17793.14	chr19	+	8129	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	-4727	-2781	intron_retention	FALSE	canonical	3	1554	junction_4	146.69625080417	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATGATCTGGTCACA	NA	False	NA	7	True	AATAAA	-8	NA	38914631	38956714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.140	chr19	+	3485	2	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	24169	411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGTAAGTATATTGT	2710	False	NA	11	True	AATAAA	-14	NA	38956301	38959906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38958340_38958459
ES.17793.141	chr19	+	2969	2	NNC	ENSMUSG00000114610.2	novel	1454	9	NA	NA	9417	-14037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTCTCAGAGTCCATAA	NA	False	NA	NA	False	AATAAA	-21	NA	38974507	38977696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38976774_38976993
ES.17793.142	chr19	+	4256	4	ISM	ENSMUSG00000114610.2	ENSMUST00000225458.2	1454	9	15490	-339	15490	339	3prime_fragment	FALSE	canonical	0	0	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTCTTAGACTCCCC	NA	False	NA	NA	False	AATAAA	-12	NA	38980580	38992072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38983996_38986873_38987051_38989586_38989729_38991550
ES.17793.15	chr19	+	3117	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	-1	2752	-1	-2752	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAACTAGTAATTTATT	NA	False	NA	36	True	AATAAA	-37	NA	38919357	38956743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.16	chr19	+	2893	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2778	combination_of_known_splicesites	FALSE	canonical	3	132	junction_10	387.746885867572	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919358	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.17	chr19	+	4466	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	0	1402	0	-1402	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACACCAGAAGAGGGCAT	NA	False	NA	NA	False	NA	NA	NA	38919358	38958093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.18	chr19	+	6287	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	0	-419	0	419	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATATTGTCAATTGCC	NA	False	NA	19	True	AATAAA	-22	NA	38919358	38959914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.2	chr19	+	3958	13	FSM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	-2	253	-2	232	multi-exon	FALSE	canonical	3	18	junction_10	4.85555237731907	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTCATTACTTTGGT	NA	False	NA	NA	False	AATAAA	-26	NA	38825020	38908114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.20	chr19	+	3052	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	1	-2778	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	416.496515591667	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919359	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.21	chr19	+	5298	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	1	569	1	-569	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGAAGCTTATTTG	NA	False	NA	19	True	AATAAA	-30	NA	38919359	38958926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.22	chr19	+	10515	18	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	20	-2772	intron_retention	FALSE	canonical	3	1554	junction_5	121.482964759029	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38919378	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38934018_38935168_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.23	chr19	+	3220	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	20	-2771	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	400.999024546288	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919378	38956724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.26	chr19	+	2951	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	22	-2772	combination_of_known_splicesites	FALSE	canonical	2	19	junction_2	415.351835797075	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38919380	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.27	chr19	+	5290	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	22	-576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.967329555786	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTTTTTGAGAAGC	NA	False	NA	12	True	AATAAA	-23	NA	38919380	38958919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919814_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.28	chr19	+	3363	23	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	22	-2772	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	527.607777560328	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38919380	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38935853_38936143_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.29	chr19	+	6030	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	22	415	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	542.805754851586	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTATATTGTCAAT	NA	False	NA	15	True	AATAAA	-18	NA	38919380	38959910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943137_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.3	chr19	+	3795	13	NNC	ENSMUSG00000048720.9	novel	4209	13	NA	NA	13	221	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.08753725347706	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGAAAATGAGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	38825035	38908103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38825754_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.30	chr19	+	3047	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	23	-2778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	417.940892950187	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919381	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926924_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.31	chr19	+	6401	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	24	-557	24	557	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTATCATTGCTTT	NA	False	NA	NA	False	AAGAAA	-22	NA	38919382	38960052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.35	chr19	+	4304	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	40	1524	40	-1524	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGGGATAGTAAATATA	NA	False	NA	NA	False	AATAAA	-17	NA	38919398	38957971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.37	chr19	+	2908	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2778	combination_of_known_splicesites	FALSE	canonical	1	32	junction_13	408.299801004115	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919400	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.38	chr19	+	3082	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	409.445573922268	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38919400	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935140_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.4	chr19	+	7590	36	Fusion	ENSMUSG00000048720.9_ENSMUSG00000025001.12	novel	4209	13	NA	NA	22	-565	multi-exon	TRUE	non_canonical	0	0	junction_1	898.563213226129	1625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAGCTTATTTGTTAA	NA	False	NA	23	True	AATAAA	-34	NA	38825044	38958930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_38825891_38836346_38836466_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314_38906417_38910280_38910371_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930894_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.40	chr19	+	4459	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2778	intron_retention	FALSE	canonical	0	0	junction_6	427.426188732516	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919400	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.41	chr19	+	2781	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2778	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	418.483424679284	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919400	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.42	chr19	+	3601	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	554.571138358281	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATATGATCTGGTCA	NA	False	NA	5	True	AATAAA	-6	NA	38919400	38956712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38936143_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947530_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.43	chr19	+	3019	20	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	576.670258690023	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919400	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38929025_38929138_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.45	chr19	+	3045	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-2775	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	385.665305532085	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTGGTCACATTATTT	NA	False	NA	13	True	AATAAA	-14	NA	38919400	38956720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926855_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.47	chr19	+	6228	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.967329555786	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAGATGTAAGTATAT	NA	False	NA	8	True	AATAAA	-11	NA	38919400	38959903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919514_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.49	chr19	+	5119	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-584	combination_of_known_splicesites	FALSE	canonical	2	19	junction_2	415.351835797075	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTAATTTTCTTTT	NA	False	NA	4	True	AATAAA	-15	NA	38919400	38958911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.5	chr19	+	5257	35	Fusion	ENSMUSG00000048720.9_ENSMUSG00000025001.12	novel	4209	13	NA	NA	26	-2772	multi-exon	FALSE	canonical	0	0	junction_13	880.383406273382	1584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCACATTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	38825048	38956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314_38906417_38910280_38910371_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.51	chr19	+	3567	26	Fusion	ENSMUSG00000025001.12_ENSMUSG00000114610.2	novel	5868	22	NA	NA	42	346	multi-exon	FALSE	canonical	0	0	junction_21	727.768314781566	1581	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGACTCCCCTCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	38919400	38992079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38973182_38973344_38983853_38983996_38986873_38987051_38989677_38989729_38991550
ES.17793.52	chr19	+	4769	19	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	436.933068298612	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTAATTTTCTTTT	NA	False	NA	4	True	AATAAA	-15	NA	38919400	38958911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938790_38943392_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.53	chr19	+	5401	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	-568	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	400.999024546288	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGAAGCTTATTTGT	NA	False	NA	20	True	AATAAA	-31	NA	38919400	38958927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.54	chr19	+	5776	19	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	42	417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	435.385812303933	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTATATTGTCAATTG	NA	False	NA	17	True	AATAAA	-20	NA	38919400	38959912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940347_38945475_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.55	chr19	+	4131	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	42	1695	42	-1695	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGGCTCTGTAGTCAG	NA	False	NA	NA	False	AATATA	-15	NA	38919400	38957800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.56	chr19	+	3003	17	ISM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	42	12787	42	4655	5prime_fragment	FALSE	canonical	3	1554	junction_5	149.457965976224	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCATGTGCAAAATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	38919400	38946708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641
ES.17793.58	chr19	+	3057	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	43	-2774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	405.297527956686	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919401	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953144_38953850_38953928_38956176
ES.17793.6	chr19	+	4032	14	NNC	ENSMUSG00000048720.9	novel	4209	13	NA	NA	38	215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.9954266985881	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAATTATGAGAAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	38825060	38908097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38899657_38899789_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.60	chr19	+	3643	23	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	536.041521149896	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919403	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38922504_38923103_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.61	chr19	+	3030	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	417.940892950187	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919403	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926915_38929026_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.64	chr19	+	3872	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2781	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_10	399.295013663467	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATGATCTGGTCACA	NA	False	NA	7	True	AATAAA	-8	NA	38919403	38956714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38936143_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.65	chr19	+	2885	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2774	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	399.347142959067	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919403	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932222_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.66	chr19	+	6953	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2771	intron_retention	FALSE	canonical	3	1554	junction_4	146.336350576335	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919403	38956724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.67	chr19	+	3152	23	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	-2774	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_21	527.318320912756	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919403	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38955458_38955562_38956176
ES.17793.68	chr19	+	6232	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	45	415	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	385.665305532085	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTATATTGTCAAT	NA	False	NA	15	True	AATAAA	-18	NA	38919403	38959910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926855_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.7	chr19	+	7084	11	ISM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	56	267	-42	218	intron_retention	FALSE	canonical	3	18	junction_10	4.56070170039655	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTATGAGAAAATGAGTC	NA	False	NA	NA	False	AATAAA	-12	NA	38825078	38908100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747
ES.17793.70	chr19	+	2816	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2778	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	409.731164911824	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919404	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.71	chr19	+	3038	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	409.463710983336	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919404	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948267_38953040_38953138_38953850_38953928_38956176
ES.17793.72	chr19	+	4493	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2778	intron_retention	FALSE	canonical	3	1554	junction_5	131.222559036166	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919404	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.73	chr19	+	8387	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-581	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	408.834536217936	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAATTTTCTTTTTGA	NA	False	NA	7	True	AATAAA	-18	NA	38919404	38958914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38923103_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.75	chr19	+	9818	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2774	intron_retention	FALSE	canonical	3	1554	junction_3	145.646652444953	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919404	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.76	chr19	+	5943	20	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	565.804415959361	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTAAGTATATTGTCA	NA	False	NA	13	True	AATAAA	-16	NA	38919404	38959908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38941986_38942149_38943134_38943275_38943355_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.77	chr19	+	5042	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-583	combination_of_known_splicesites	FALSE	canonical	3	132	junction_10	387.746885867572	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	38919404	38958912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.78	chr19	+	5216	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	417.940892950187	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTGTTAATTTTCTT	NA	False	NA	2	True	AATAAA	-13	NA	38919404	38958909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926924_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.8	chr19	+	3836	14	NNC	ENSMUSG00000048720.9	novel	4209	13	NA	NA	-40	219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.5547322462547	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATGAGAAAATGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38825080	38908101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38825754_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38899700_38899789_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.80	chr19	+	2942	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2778	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	426.947056991478	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919404	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.81	chr19	+	2802	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	46	3020	46	-3020	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGTAGTACTTCTGAG	NA	False	NA	NA	False	TATAAA	-37	NA	38919404	38956475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.82	chr19	+	3109	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2778	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	407.569055679393	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919404	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943069_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.83	chr19	+	6308	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-583	intron_retention	FALSE	canonical	3	1554	junction_5	145.68074988284	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	38919404	38958912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.84	chr19	+	4878	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-583	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	527.439276125698	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTAATTTTCTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	38919404	38958912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932222_38933834_38934018_38935168_38935313_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.85	chr19	+	3220	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2774	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	405.976597518165	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919404	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919662_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.86	chr19	+	6039	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	414	combination_of_known_splicesites	FALSE	canonical	3	132	junction_10	387.746885867572	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTAAGTATATTGTCAA	NA	False	NA	14	True	AATAAA	-17	NA	38919404	38959909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.87	chr19	+	2951	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-2774	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	415.001337347243	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919404	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953850_38953928_38956176
ES.17793.88	chr19	+	3311	23	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-3109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	536.041521149896	1525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTAGTATTGCATACTT	NA	False	NA	NA	False	AATATA	-15	NA	38919404	38956386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38922504_38923103_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.89	chr19	+	5078	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-584	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	572.629672984444	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTAATTTTCTTTT	NA	False	NA	4	True	AATAAA	-15	NA	38919404	38958911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_38919520_38919834_38919957_38926849_38926907_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.9	chr19	+	3646	11	FSM	ENSMUSG00000048720.9	ENSMUST00000235558.2	3401	11	-24	-221	-24	221	multi-exon	FALSE	canonical	0	0	junction_4	9.34933152690608	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGAAAATGAGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	38825096	38908103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ES.17793.90	chr19	+	5159	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	46	-588	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	407.722116475227	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAATTTGTTAATTTTC	NA	False	NA	0	True	AATAAA	-11	NA	38919404	38958907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947530_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.91	chr19	+	6687	20	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	48	-6658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	422.39416547217	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACCATATAATTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	38919406	38952837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38951857_38952061
ES.17793.92	chr19	+	5322	21	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	48	-2778	intron_retention	FALSE	canonical	1	29	junction_10	408.847110788373	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919406	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38936143_38938631_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.93	chr19	+	5409	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	48	411	48	-411	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCAGTGGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	38919406	38959084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.94	chr19	+	3177	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	48	-2776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	538.376171922877	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATCTGGTCACATTATT	NA	False	NA	12	True	AATAAA	-13	NA	38919406	38956719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943265_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.96	chr19	+	3079	23	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	49	-2778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	527.74804007372	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919407	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38936104_38936143_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.97	chr19	+	3020	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	49	-2778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	407.921733411655	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919407	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948133_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.98	chr19	+	3038	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	49	-2774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	408.458031771712	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTCACATTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	38919407	38956721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945755_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17793.99	chr19	+	3005	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	51	-2778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	401.163025767119	1537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGATCTGGTCACATTA	NA	False	NA	10	True	AATAAA	-11	NA	38919409	38956717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932352_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ES.17794.1	chr19	-	376	1	Intergenic	novelGene_14770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCCACACTCGCTCCAC	NA	False	NA	NA	False	NA	NA	NA	38834401	38834025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38834000_38834400
ES.17795.1	chr19	-	180	1	Intergenic	novelGene_14772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAATGAAGAGAG	1774	False	NA	NA	False	NA	NA	NA	38873024	38872844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38872800_38873000
ES.17796.1	chr19	-	2026	3	Antisense	novelGene_ENSMUSG00000025001.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTCATCTCATTAAC	NA	False	NA	NA	False	NA	NA	NA	38946278	38942191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_38943490_38945471_38945561_38945639
ES.17796.2	chr19	-	3344	1	Antisense	novelGene_ENSMUSG00000025001.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTCATCTCATTAAC	NA	False	NA	NA	False	NA	NA	NA	38945535	38942191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_38942200_38945500
ES.17797.1	chr19	-	1284	1	Antisense	novelGene_ENSMUSG00000114610.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	38967461	38966177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_38966200_38967500
ES.17798.1	chr19	-	177	1	Intergenic	novelGene_14775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATCCAAGTCATA	NA	False	NA	NA	False	NA	NA	NA	38981027	38980850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_38980800_38981000
ES.17799.1	chr19	+	1823	7	NNC	ENSMUSG00000025002.6	novel	1995	9	NA	NA	8649	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGGAATTCTTTACT	NA	False	NA	NA	False	NA	NA	NA	39004111	39031132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_39004453_39007086_39007248_39019705_39019883_39022682_39022825_39023888_39024077_39026543_39026686_39030460
ES.178.1	chr1	+	521	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTGCAGAAAAAGAATCC	NA	False	NA	NA	False	NA	NA	NA	22362500	22363021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_22362500_22363000
ES.1780.1	chr1	+	233	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	165093117	165093350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165093100_165093400
ES.17800.1	chr19	+	488	2	Intergenic	novelGene_14776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCTTTCAGCCCCAG	NA	False	NA	NA	False	NA	NA	NA	39805102	39810222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_39805261_39809892
ES.17801.1	chr19	+	341	2	Intergenic	novelGene_14777	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTAGTCTTGGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	39948009	39960198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_39948197_39960044
ES.17801.2	chr19	+	3385	2	Intergenic	novelGene_14778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGTAGTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	39948012	39960193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_39950520_39959315
ES.17802.1	chr19	+	2054	1	Intergenic	novelGene_14779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACATTTACAAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	40256644	40258698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_40256600_40258700
ES.17803.1	chr19	-	2516	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	55	0	55	0	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTTCCTGGAAGTG	NA	False	NA	NA	False	NA	NA	NA	40260005	40209616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ES.17803.2	chr19	-	1566	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	-60	1065	-60	125	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCTCTTAGTTGACT	NA	False	NA	-17	True	AATAAA	-19	NA	40260120	40210681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ES.17803.3	chr19	-	1220	6	NIC	ENSMUSG00000055044.13	novel	2571	7	NA	NA	89	122	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	87.9286074039615	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGACCTCTTAGTTG	NA	False	NA	-20	True	AATAAA	-16	NA	40259971	40210684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40211216_40211494_40211613_40218950_40219103_40238062_40238148_40240353_40240506_40259789
ES.17803.5	chr19	-	1396	7	NNC	ENSMUSG00000055044.13	novel	2571	7	NA	NA	95	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3989279865541	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATGTGTGACCTCTT	NA	False	NA	-25	True	AATAAA	-11	NA	40259965	40210689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40211216_40211501_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ES.17803.6	chr19	-	1211	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	89	1271	89	79	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGACTCCCACTGGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	40259971	40210887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ES.17804.1	chr19	+	184	1	Intergenic	novelGene_14780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAAGGATTGGGGCCAT	NA	False	NA	NA	False	NA	NA	NA	40261490	40261674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_40261500_40261700
ES.17805.1	chr19	+	3158	1	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCAAGTTCTATTCCTA	NA	False	NA	NA	False	NA	NA	NA	40302893	40306051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40302900_40306100
ES.17805.2	chr19	+	2637	2	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGGT	NA	False	NA	NA	False	NA	NA	NA	40303359	40306036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40305390_40305429
ES.17806.1	chr19	+	4397	1	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAACTTTTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40355525	40359922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40355500_40359900
ES.17807.1	chr19	+	1844	1	Intergenic	novelGene_14783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAACAAGCAAACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40431314	40433158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_40431300_40433200
ES.17808.1	chr19	+	4101	2	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGTAGAGCCAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	40495864	40500292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40496873_40497199
ES.17808.2	chr19	+	4076	2	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40495866	40500266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40496921_40497244
ES.17808.3	chr19	+	1870	2	Antisense	novelGene_ENSMUSG00000025006.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40498319	40500266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_40500015_40500091
ES.17809.1	chr19	-	5446	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-14	2713	combination_of_known_junctions	FALSE	canonical	2	4	junction_18	20.5163957671444	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9874	False	NA	-1	True	AATAAA	-23	NA	40502209	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.10	chr19	-	5535	26	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-11	2712	combination_of_known_junctions	FALSE	canonical	2	5	junction_19	22.3984285163044	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9877	False	NA	-2	True	AATAAA	-22	NA	40502206	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.11	chr19	-	5261	22	NNC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-13	2712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	21.475609748246	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9875	False	NA	-2	True	AATAAA	-22	NA	40502208	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387084_40439757_40439843_40502114
ES.17809.12	chr19	-	4031	9	NIC	ENSMUSG00000025006.19	novel	4313	27	NA	NA	-13936	2712	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	23.8799078725191	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	NA	False	NA	-2	True	AATAAA	-22	NA	40314128	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40313914
ES.17809.13	chr19	-	5580	24	NIC	ENSMUSG00000025006.19	novel	4313	27	NA	NA	-11	2712	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	24.8118820246072	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9877	False	NA	-2	True	AATAAA	-22	NA	40502206	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.14	chr19	-	5264	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	6	2712	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9866	False	NA	-2	True	AATAAA	-22	NA	40502217	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.15	chr19	-	5606	23	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-3	2712	intron_retention	FALSE	canonical	3	22	junction_3	19.7447032336554	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9896	False	NA	-2	True	AATAAA	-22	NA	40502187	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.16	chr19	-	5314	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-13	2711	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9875	False	NA	-3	True	AATAAA	-21	NA	40502208	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.17	chr19	-	5893	25	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	32	2711	intron_retention	FALSE	canonical	0	0	junction_24	22.6977421784635	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9998	False	NA	-3	True	AATAAA	-21	NA	40502085	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40501814
ES.17809.18	chr19	-	5374	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-13	2711	combination_of_known_junctions	FALSE	canonical	1	1	junction_20	22.6522156387832	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9875	False	NA	-3	True	AATAAA	-21	NA	40502208	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40384122_40384213_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.19	chr19	-	5789	25	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-4	2711	intron_retention	FALSE	canonical	1	1	junction_11	25.2651219844451	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9856	False	NA	-3	True	AATAAA	-21	NA	40502227	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40332799_40332884_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.2	chr19	-	5318	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-17	2713	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	16.9725105892581	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9843	False	NA	-1	True	AATAAA	-23	NA	40502240	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.20	chr19	-	5451	24	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	10	2711	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	22.0621222930981	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9870	False	NA	-3	True	AATAAA	-21	NA	40502213	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.21	chr19	-	5476	24	NNC	ENSMUSG00000025006.19	novel	4313	27	NA	NA	-11	2711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.2887844723927	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9877	False	NA	-3	True	AATAAA	-21	NA	40502206	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284979_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.22	chr19	-	5653	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	5	2711	intron_retention	FALSE	canonical	3	14	junction_4	21.6767801513871	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCTGTGTTCTCTTCCT	9908	False	NA	-3	True	AATAAA	-21	NA	40502175	40280485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.23	chr19	-	5827	25	NNC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-2876	2710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.4015137928785	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	8633	False	NA	-4	True	AATAAA	-20	NA	40442710	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40329128_40329195_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40442297
ES.17809.24	chr19	-	5730	25	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	0	2710	intron_retention	FALSE	canonical	3	14	junction_4	20.5040223018693	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9860	False	NA	-4	True	AATAAA	-20	NA	40502223	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.25	chr19	-	5413	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-10	2710	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	23.3302905568473	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	NA	False	NA	-4	True	AATAAA	-20	NA	40439844	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757
ES.17809.26	chr19	-	5865	25	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-3	2710	intron_retention	FALSE	canonical	0	0	junction_3	21.9854355199073	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9857	False	NA	-4	True	AATAAA	-20	NA	40502226	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40288098_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.27	chr19	-	3059	3	NNC	ENSMUSG00000025006.19	novel	575	3	NA	NA	3268	2710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	8417	False	NA	-4	True	AATAAA	-20	NA	40285002	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40281414_40281455_40283561_40284975
ES.17809.28	chr19	-	5512	26	NNC	ENSMUSG00000025006.19	novel	4313	27	NA	NA	1	2710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1700286587539	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9900	False	NA	-4	True	AATAAA	-20	NA	40502183	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40281090_40281165_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.29	chr19	-	5721	24	NNC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-4	2710	intron_retention	FALSE	canonical	0	0	junction_16	21.7889863092718	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCTGTGTTCTCTTCC	9856	False	NA	-4	True	AATAAA	-20	NA	40502227	40280486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358211_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.3	chr19	-	5669	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	4	2713	intron_retention	FALSE	canonical	3	22	junction_3	18.4479034520711	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9864	False	NA	-1	True	AATAAA	-23	NA	40502219	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.30	chr19	-	5475	25	NNC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-11	2709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	25.1815284484481	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCTCTGTGTTCTCTTC	9877	False	NA	-5	True	AATAAA	-19	NA	40502206	40280487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371051_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.31	chr19	-	5545	22	NNC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	10	2700	intron_retention	FALSE	canonical	0	0	junction_15	24.9214639433434	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCGTGGCACCTCTGT	9976	False	NA	-14	True	AATAAA	-10	NA	40502107	40280496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353635_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40502022
ES.17809.32	chr19	-	4239	3	FSM	ENSMUSG00000025006.19	ENSMUST00000225306.2	575	3	-3398	-266	-3398	0	multi-exon	FALSE	canonical	3	38	junction_2	1.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	8039	False	NA	NA	False	NA	NA	NA	40291668	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40283561_40284975_40285089_40287906
ES.17809.33	chr19	-	2631	24	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9877	False	NA	NA	False	NA	NA	NA	40502206	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.34	chr19	-	2561	22	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9857	False	NA	NA	False	NA	NA	NA	40502226	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.35	chr19	-	2736	25	NNC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.56547468697	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9908	False	NA	NA	False	NA	NA	NA	40502175	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340716_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.36	chr19	-	3086	25	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_23	25.0144402740142	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9901	False	NA	NA	False	NA	NA	NA	40502182	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40489892_40490030_40502114
ES.17809.37	chr19	-	3443	24	NNC	ENSMUSG00000025006.19	novel	4342	30	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_3	24.340526856193	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9870	False	NA	NA	False	NA	NA	NA	40502213	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40283561_40284975_40285089_40287906_40287966_40298254_40298778_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.38	chr19	-	2973	24	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-11	0	intron_retention	FALSE	canonical	3	14	junction_4	21.6767801513871	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAGTCTTTACCCAC	9877	False	NA	NA	False	NA	NA	NA	40502206	40283196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.39	chr19	-	2874	23	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-1	0	intron_retention	FALSE	canonical	3	22	junction_3	19.7447032336554	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	9898	False	NA	NA	False	NA	NA	NA	40502185	40283214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.4	chr19	-	5463	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-1	2713	combination_of_known_junctions	FALSE	canonical	2	4	junction_18	23.3628402861935	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9887	False	NA	-1	True	AATAAA	-23	NA	40502196	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.40	chr19	-	1881	1	NIC	ENSMUSG00000025006.19	novel	3313	20	NA	NA	3175	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	8324	False	NA	NA	False	NA	NA	NA	40285095	40283214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283200_40285100
ES.17809.41	chr19	-	2646	25	NIC	ENSMUSG00000025006.19	novel	2582	24	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	22.8080379958957	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	9877	False	NA	NA	False	NA	NA	NA	40502206	40283214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365427_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.42	chr19	-	2917	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	22	junction_3	18.4479034520711	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAT	9884	False	NA	NA	False	NA	NA	NA	40502199	40283215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.43	chr19	-	2834	24	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	-9	-18	intron_retention	FALSE	canonical	3	14	junction_4	21.6767801513871	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAGTGTGTTTGAAAC	9851	False	NA	NA	False	AAGAAA	-39	NA	40502232	40283361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.44	chr19	-	3306	19	NNC	ENSMUSG00000025006.19	novel	888	9	NA	NA	4	-4819	intron_retention	FALSE	canonical	3	4	junction_1	21.0719666328935	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTTGTACTGTTTTTTC	9864	False	NA	NA	False	AATAAA	-20	NA	40502219	40304710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40306033_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.45	chr19	-	3270	18	NNC	ENSMUSG00000025006.19	novel	888	9	NA	NA	7	-4822	intron_retention	FALSE	canonical	3	4	junction_1	22.6952123664852	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCTTGTACTGTTTT	9867	False	NA	NA	False	AATAAA	-17	NA	40502216	40304713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40306033_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.46	chr19	-	3521	18	NNC	ENSMUSG00000025006.19	novel	2785	22	NA	NA	-9	-4832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	25.2457814489641	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATCTGAAAGGATCTT	9957	False	NA	NA	False	AATAAA	-7	NA	40502126	40304723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502022
ES.17809.47	chr19	-	1767	17	NNC	ENSMUSG00000025006.19	novel	888	9	NA	NA	4	-10980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4159863832243	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCCAGAGCGTCTAAGA	9864	False	NA	NA	False	AAAAAG	-18	NA	40502219	40310871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40311074_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.48	chr19	-	231	1	Intergenic	novelGene_14781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTTTTCCAAAAAGTAG	NA	False	NA	NA	False	AAGAAA	-30	NA	40334035	40333804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_40333800_40334000
ES.17809.49	chr19	-	3421	1	Intergenic	novelGene_14782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	AAGAAA	-31	NA	40337597	40334176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_40334200_40337600
ES.17809.5	chr19	-	6822	3	FSM	ENSMUSG00000025006.19	ENSMUST00000225306.2	575	3	-3268	-2979	-3268	2713	multi-exon	FALSE	canonical	3	38	junction_2	1.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	8169	False	NA	-1	True	AATAAA	-23	NA	40291538	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40283561_40284975_40285089_40287906
ES.17809.50	chr19	-	2058	12	NNC	ENSMUSG00000025006.19	novel	2785	22	NA	NA	30	2817	intron_retention	FALSE	canonical	0	0	junction_11	26.0917009699278	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAACCAATAGAATGT	9996	False	NA	NA	False	ATTAAA	-8	NA	40502087	40337955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40501824
ES.17809.6	chr19	-	5361	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	2713	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9860	False	NA	-1	True	AATAAA	-23	NA	40502223	40280483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.7	chr19	-	5537	25	NIC	ENSMUSG00000025006.19	novel	4313	27	NA	NA	-9	2712	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	23.0361657086321	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9851	False	NA	-2	True	AATAAA	-22	NA	40502232	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.8	chr19	-	5218	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	-1	2712	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	23.770539513289	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9859	False	NA	-2	True	AATAAA	-22	NA	40502224	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.17809.9	chr19	-	5643	27	NIC	ENSMUSG00000025006.19	novel	3589	29	NA	NA	1	2712	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	27.1676800672543	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9904	False	NA	-2	True	AATAAA	-22	NA	40502179	40280484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40328488_40328591_40329128_40329195_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365248_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
ES.1781.1	chr1	-	6086	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	165100955	165094869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165094900_165101000
ES.17810.1	chr19	-	157	1	Intergenic	novelGene_14784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	40531806	40531649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_40531600_40531800
ES.17811.1	chr19	-	3536	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	-98	-11	-4	11	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCCCTTATTTGTC	NA	False	NA	0	True	AATAAA	-29	NA	40576911	40538689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.11	chr19	-	3328	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	285.939137425115	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576853	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.12	chr19	-	5676	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	945	junction_11	101.199586962517	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576862	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.13	chr19	-	3491	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	278.846084585904	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576825	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568567_40573933_40574050_40574570_40574637_40576753
ES.17811.14	chr19	-	5356	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	945	junction_10	103.078853311433	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576809	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.15	chr19	-	3299	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	283.295531247303	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576834	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543067_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.16	chr19	-	3306	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_10	288.241008346719	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576811	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.17	chr19	-	4965	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	28	junction_8	294.580607601722	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576834	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40556840_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.18	chr19	-	3392	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	39	junction_11	281.263301876905	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576863	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.19	chr19	-	3224	17	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	286.603602559354	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576824	40538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568510_40576780
ES.17811.2	chr19	-	3646	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	-111	-8	-111	8	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTTTTCTCCCTTATTT	NA	False	NA	-3	True	AATAAA	-26	NA	40577018	40538692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.22	chr19	-	3431	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	284.470685638528	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576830	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576771
ES.17811.25	chr19	-	3460	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	282.123150808689	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576832	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562645_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.26	chr19	-	3442	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	284.558381043719	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576836	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559024_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.28	chr19	-	8260	16	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1062	junction_8	85.7690438846609	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576824	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.29	chr19	-	5293	18	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	292.120418835017	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576825	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40558387_40558464_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.3	chr19	-	6316	10	NIC	ENSMUSG00000025007.14	novel	3427	19	NA	NA	16134	8	intron_retention	FALSE	canonical	3	1062	junction_7	45.7127369667104	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTTTTCTCCCTTATTT	4371	False	NA	-3	True	AATAAA	-26	NA	40560679	40538692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911
ES.17811.30	chr19	-	5503	17	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_10	396.286744155984	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576831	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40558911_40559037_40562214_40562306_40562650_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.32	chr19	-	3256	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	291.396221295794	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576824	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.33	chr19	-	4430	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	945	junction_11	100.997413376039	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576840	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.34	chr19	-	2672	14	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	305.688281495688	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576828	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562687_40576749
ES.17811.35	chr19	-	4608	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	283.891585114398	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576777	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40558387_40558464_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.37	chr19	-	3644	20	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	370.491595263192	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576831	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40542163_40542347_40543023_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.38	chr19	-	2562	13	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	328.590762026094	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576822	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557601_40573946_40574050_40574570_40574637_40576753
ES.17811.39	chr19	-	3261	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	286.603602559354	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576824	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40576753
ES.17811.40	chr19	-	3303	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	283.295531247303	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576850	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543056_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.43	chr19	-	6629	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	945	junction_11	98.3039914778867	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACAGTTCGTTTTCT	NA	False	NA	-12	True	AATAAA	-17	NA	40576832	40538701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.44	chr19	-	3436	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	284.653308733342	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576824	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555021_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.45	chr19	-	5124	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	-2	intron_retention	FALSE	canonical	3	945	junction_11	98.1121454234122	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576850	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.48	chr19	-	8896	15	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1062	junction_8	85.8517944614141	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576824	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.49	chr19	-	3169	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	300.991583925116	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576821	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.5	chr19	-	3836	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	4	4	intron_retention	FALSE	canonical	3	1062	junction_8	85.3343110166022	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTTCGTTTTCTCCCTT	NA	False	NA	-7	True	AATAAA	-22	NA	40576863	40538696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.50	chr19	-	3208	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	28	junction_9	390.682490769359	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576826	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40558911_40559037_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.52	chr19	-	3426	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	281.239496374509	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576826	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566109_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.53	chr19	-	3553	20	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	364.286020469001	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576824	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40569934_40570046_40573933_40574050_40574570_40574637_40576753
ES.17811.54	chr19	-	6949	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	9	-2	intron_retention	FALSE	canonical	3	1062	junction_8	83.0696244122965	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCACAGTTCGTTTTC	NA	False	NA	-13	True	AATAAA	-16	NA	40576804	40538702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.58	chr19	-	5307	18	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	389.484860742244	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCACAGTTCGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	40576831	40538703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40558387_40558464_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566376_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.6	chr19	-	8522	9	NNC	ENSMUSG00000025007.14	novel	3427	19	NA	NA	15772	3	intron_retention	TRUE	non_canonical	0	0	junction_8	380.014144473597	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTTCGTTTTCTCCCT	4009	False	NA	-8	True	AATAAA	-21	NA	40561041	40538697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40558387_40558464
ES.17811.61	chr19	-	5577	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	88	junction_16	273.298486091672	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCACAGTTCGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	40576832	40538703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
ES.17811.63	chr19	-	3390	18	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	292.781813491581	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCACAGTTCGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	40576839	40538703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555114_40557472_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.64	chr19	-	2941	15	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	321.537195931275	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCACAGTTCGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	40576824	40538703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553458_40562233_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.65	chr19	-	3379	18	NIC	ENSMUSG00000025007.14	novel	3427	19	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	339.687267124287	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCACAGTTCGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	40576834	40538703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
ES.17811.69	chr19	-	3272	18	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	291.396221295794	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGCACAGTTCGTTT	NA	False	NA	-15	True	AATAAA	-14	NA	40576827	40538704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40545846_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.7	chr19	-	5627	18	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	3	intron_retention	FALSE	canonical	1	1	junction_13	288.93236238712	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTTCGTTTTCTCCCT	NA	False	NA	-8	True	AATAAA	-21	NA	40576826	40538697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566111_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.70	chr19	-	3487	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	61	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	284.470685638528	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGCACAGTTCGTTT	NA	False	NA	-15	True	AATAAA	-14	NA	40576752	40538704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576634
ES.17811.71	chr19	-	2874	16	NNC	ENSMUSG00000025007.14	novel	3427	19	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	362.772374300408	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGCACAGTTCGTT	NA	False	NA	-16	True	AATAAA	-13	NA	40576824	40538705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566080_40574601_40574637_40576753
ES.17811.72	chr19	-	3388	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	365.880255153392	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGCACAGTTCGTT	NA	False	NA	-16	True	AATAAA	-13	NA	40576817	40538705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568496_40573946_40574050_40574576_40574637_40576753
ES.17811.73	chr19	-	3022	16	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	8449	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	293.251306713012	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCATGTGCACAGTTCGT	NA	False	NA	-17	True	AATAAA	-12	NA	40568364	40538706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543224_40545871_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305
ES.17811.75	chr19	-	3467	17	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	5	-9	intron_retention	FALSE	canonical	1	7	junction_4	389.786459968789	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCATGTGCACAGTT	NA	False	NA	-20	True	AATAAA	-9	NA	40576862	40538709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545981_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562654_40562814_40566021_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.76	chr19	-	3152	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	2	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	299.454921482349	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCATGTGCACAGTT	NA	False	NA	-20	True	AATAAA	-9	NA	40576824	40538709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.79	chr19	-	2872	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-702	-1648	-702	1648	mono-exon	FALSE	NA	NA	NA	NA	NA	1302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCCAGCTCCTGCACA	NA	False	NA	NA	False	NA	NA	NA	40550204	40547332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40547300_40550200
ES.17811.8	chr19	-	3427	19	NNC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	282.848059373505	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACAGTTCGTTTTCTCCC	NA	False	NA	-9	True	AATAAA	-20	NA	40576853	40538698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40539726_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ES.17811.80	chr19	-	2617	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1398	-697	1398	mono-exon	FALSE	NA	NA	NA	NA	NA	1301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATTGTGAATCAGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	40550199	40547582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40547600_40550200
ES.17811.81	chr19	-	2488	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1269	-697	1269	mono-exon	FALSE	NA	NA	NA	NA	NA	1300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACACTTTTGCCTAAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	40550199	40547711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40547700_40550200
ES.17811.82	chr19	-	2363	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1144	-697	1144	mono-exon	FALSE	NA	NA	NA	NA	NA	1300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGGGAATGTGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	40550199	40547836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40547800_40550200
ES.17811.83	chr19	-	2258	2	Genic_Genomic	ENSMUSG00000096592.2	novel	522	1	NA	NA	-697	1138	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATACTGTCTGGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	40550199	40547842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_40549632_40549730
ES.17811.9	chr19	-	3434	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	265.434357090177	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACAGTTCGTTTTCTCCC	NA	False	NA	-9	True	AATAAA	-20	NA	40576878	40538698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
ES.17812.1	chr19	-	6255	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	35	-3547	2	3547	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAGA	-22	NA	40600642	40581342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17812.2	chr19	-	3552	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	26	-835	-4	835	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAAATTGTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	40600651	40584054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17812.3	chr19	-	3054	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	34	-345	1	345	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGACTCGTGAAGCC	NA	False	NA	NA	False	AGTAAA	-20	NA	40600643	40584544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17812.4	chr19	-	2954	13	NIC	ENSMUSG00000025008.16	novel	2743	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_10	4.04831926716371	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	-1	True	CATAAA	-17	NA	40600650	40584889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40600219_40600368
ES.17812.5	chr19	-	2760	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	-17	0	-17	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	-1	True	CATAAA	-17	NA	40600694	40584889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17812.6	chr19	-	2011	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	-8	740	-8	-740	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGAATTTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	40600685	40585629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17812.7	chr19	-	2028	13	ISM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	26	5951	-4	2701	5prime_fragment	FALSE	canonical	3	33	junction_9	4.56131072780134	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATATGTCTCTGGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	40600651	40590840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ES.17813.1	chr19	+	2061	10	FSM	ENSMUSG00000048120.17	ENSMUST00000134063.8	2409	10	22	326	22	-287	multi-exon	TRUE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGTCCAAGCCTGCC	NA	False	NA	NA	False	AATAAA	-32	NA	40600862	40727912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40600968_40699606_40699735_40708900_40709019_40711530_40711682_40713368_40713529_40714465_40714703_40715731_40715993_40722110_40722231_40725193_40725329_40727266
ES.17813.2	chr19	+	2834	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	-684	-1628	-684	1628	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTATCTTATTACTTA	NA	False	NA	NA	False	AATAAA	-27	NA	40610219	40613053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40610200_40613100
ES.17813.3	chr19	+	2464	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	-684	-1258	-684	1258	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTCACTGAGGACACTT	NA	False	NA	NA	False	AATAAA	-12	NA	40610219	40612683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40610200_40612700
ES.17814.1	chr19	+	4969	1	NIC	ENSMUSG00000108929.3	novel	4762	34	NA	NA	3948	5138	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAGAAAAGGGGCACT	NA	False	NA	NA	False	ATTAAA	-11	NA	40766761	40771730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_40766800_40771700
ES.17815.1	chr19	+	3831	7	NNC	ENSMUSG00000025010.15	novel	3763	5	NA	NA	-546	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7709623886731	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTCTTGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	40819176	40837012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40819363_40819502_40819533_40820422_40820533_40825360_40825572_40833103_40833404_40833524_40833649_40834142
ES.17815.2	chr19	+	3855	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	-36	0	-36	0	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40819686	40837016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ES.17815.3	chr19	+	3818	6	NNC	ENSMUSG00000025010.15	novel	3819	6	NA	NA	-36	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	8.01498596380555	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTCTTGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	40819686	40837012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ES.17815.4	chr19	+	3740	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	-36	115	-36	-115	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATCTGTGCTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	40819686	40836901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ES.17815.5	chr19	+	3466	5	NNC	ENSMUSG00000025010.15	novel	3819	6	NA	NA	-17	-126	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	9.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACGCAAACCAAATATC	NA	False	NA	NA	False	AATAAA	-15	NA	40819705	40836890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40819887_40820422_40820533_40833103_40833404_40833521_40833649_40834142
ES.17815.6	chr19	+	1757	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	8	2054	8	-1491	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTTTTTTTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	40819730	40834962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ES.17815.7	chr19	+	4390	4	ISM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	8	0	8	0	intron_retention	FALSE	canonical	3	23	junction_2	2.16024689946929	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40819730	40837016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103
ES.17815.8	chr19	+	3654	6	NNC	ENSMUSG00000025010.15	novel	3819	6	NA	NA	-12	-115	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	8.01498596380555	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATCTGTGCTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	40819739	40836901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ES.17816.1	chr19	-	345	1	Antisense	novelGene_ENSMUSG00000025010.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAAAACCTCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	40835322	40834977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_40835000_40835300
ES.17817.1	chr19	+	1837	3	NNC	ENSMUSG00000097740.3	novel	1266	3	NA	NA	-444	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATTGCACTTTCACTA	9742	False	NA	NA	False	AATAAA	-17	NA	40856303	40862512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40856885_40859187_40859299_40861367
ES.17817.2	chr19	+	1284	2	NNC	ENSMUSG00000097740.3	novel	1266	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCACTTTCACTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	40856748	40862515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40856885_40861367
ES.17817.3	chr19	+	807	5	NNC	ENSMUSG00000097740.3	novel	1266	3	NA	NA	5132	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTGATTGTTAATGT	NA	False	NA	NA	False	NA	NA	NA	40861961	40871079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40862018_40864742_40864843_40865180_40865318_40870040_40870273_40870797
ES.17817.4	chr19	+	1518	2	ISM	ENSMUSG00000097740.3	ENSMUST00000237948.2	880	5	12274	7	12204	-7	3prime_fragment	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGAAGTGATTGTTAA	NA	False	NA	NA	False	NA	NA	NA	40869033	40871076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_40870273_40870797
ES.17818.1	chr19	+	7208	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-814	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	40.2453413453036	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTCTTCTTTTTTTTA	NA	False	NA	44	True	ATTAAA	-21	NA	40882334	40906390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.11	chr19	+	7076	6	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	49.3477456425316	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883127	40906386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883235_40885527_40885610_40891282_40891503_40896502_40896648_40899476_40899554_40899941
ES.17818.12	chr19	+	6375	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-16	481	-16	15	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTACCCATGTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	40883132	40905910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.14	chr19	+	6688	4	NIC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	45.7019328548221	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTTTCTTCTTTTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	40883152	40906388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_40883235_40885527_40885610_40899476_40899554_40899941
ES.17818.15	chr19	+	6783	5	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4459668001292	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883154	40906386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883189_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.16	chr19	+	6848	5	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4459668001292	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883166	40906386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883266_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.17	chr19	+	6826	5	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4459668001292	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883168	40906386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883246_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.18	chr19	+	6875	5	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4459668001292	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGAGTTTCTTCTTTTTT	NA	False	NA	41	True	ATTAAA	-18	NA	40883169	40906387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883295_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.19	chr19	+	3382	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	21	3437	21	-2941	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTACTCTCCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	40883169	40902954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.2	chr19	+	4397	1	FSM	ENSMUSG00000099118.3	ENSMUST00000183735.3	87	1	-679	-3631	-679	3631	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTTCAGAACTGGGTT	NA	False	NA	NA	False	NA	NA	NA	40882467	40886864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40882500_40886900
ES.17818.20	chr19	+	7181	7	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	52.2557811793745	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGAGTTTCTTCTTTTT	NA	False	NA	40	True	ATTAAA	-17	NA	40883171	40906386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883235_40885527_40885610_40890297_40890447_40891282_40891503_40896502_40896648_40899476_40899554_40899941
ES.17818.21	chr19	+	8612	4	NIC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	25	0	intron_retention	FALSE	canonical	3	112	junction_3	5.31245915016974	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAGAAAAAAGGACT	NA	False	NA	NA	False	AATAAA	-13	NA	40883173	40905895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.22	chr19	+	6859	5	NNC	ENSMUSG00000049164.8	novel	6840	5	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.6261246656568	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40883173	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883235_40885527_40885610_40896452_40896648_40899476_40899554_40899941
ES.17818.23	chr19	+	5902	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	32	906	32	-410	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCCAAAATAGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	40883180	40905485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.24	chr19	+	6876	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	241	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	48.8588528313959	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTTTCTTCTTTTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	40883389	40906388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883515_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.25	chr19	+	6393	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	244	13	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	48.8588528313959	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTGTACCCATGTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	40883392	40905908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883515_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.26	chr19	+	6897	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	462	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	46.7038542306735	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTTTCTTCTTTTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	40883610	40906388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883757_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.27	chr19	+	8650	4	ISM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	475	8	475	-4	3prime_fragment	FALSE	canonical	3	112	junction_3	5.31245915016974	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGAGAGTTTCTTCTT	NA	False	NA	37	True	ATTAAA	-14	NA	40883623	40906383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.28	chr19	+	6919	6	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	496	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1171231221918	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40883644	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40883757_40884538_40884598_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.29	chr19	+	1737	2	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	7811	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	9699	False	NA	39	True	ATTAAA	-16	NA	40904413	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40904557_40904791
ES.17818.3	chr19	+	6791	4	NNC	ENSMUSG00000049164.8	novel	1345	4	NA	NA	-547	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	47.2252286624662	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40882601	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40885527_40885610_40899476_40899554_40899941
ES.17818.4	chr19	+	6458	5	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-544	15	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	40.2453413453036	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTACCCATGTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	40882604	40905910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.5	chr19	+	8346	7	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-544	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.3187480056395	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40882604	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40885527_40885610_40890297_40890447_40891282_40892547_40896502_40896648_40899476_40899554_40899941
ES.17818.6	chr19	+	1522	2	NNC	ENSMUSG00000049164.8	novel	1345	4	NA	NA	-544	-19031	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	0	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTTCAGAACTGGGTT	NA	False	NA	NA	False	NA	NA	NA	40882604	40886864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40885527
ES.17818.7	chr19	+	6851	4	NNC	ENSMUSG00000049164.8	novel	6568	3	NA	NA	-544	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.1129812669641	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	False	NA	39	True	ATTAAA	-16	NA	40882604	40906385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_40882790_40896502_40896648_40899476_40899554_40899941
ES.17818.8	chr19	+	6879	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-40	1	-40	-1	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTCTTCTTTTTTTTA	NA	False	NA	44	True	ATTAAA	-21	NA	40883108	40906390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17818.9	chr19	+	4831	5	FSM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	-30	2039	-30	-1543	multi-exon	FALSE	canonical	3	75	junction_1	19.3196790863617	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTACCAGATTGTAAAAA	NA	False	NA	NA	False	AAGAAA	-41	NA	40883118	40904352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_40883235_40885527_40885610_40896502_40896648_40899476_40899554_40899941
ES.17819.1	chr19	-	180	1	Intergenic	novelGene_14785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTGATCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	40913727	40913547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_40913500_40913700
ES.1782.1	chr1	+	7435	6	NNC	ENSMUSG00000040836.16	novel	1827	6	NA	NA	-13971	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.2	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCTGTGTAAATGGTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	165109386	165154314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165110147_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ES.1782.3	chr1	+	4887	3	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACCAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165112760	165118477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165114942_165115570_165116565_165116765
ES.1782.4	chr1	+	2398	4	ISM	ENSMUSG00000040836.16	ENSMUST00000111450.3	6862	6	7693	3815	7693	1133	3prime_fragment	FALSE	canonical	1	1	junction_1	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGTCTTTGTGTTATT	NA	False	NA	NA	False	NA	NA	NA	165137884	165150499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_165138563_165144808_165144914_165146317_165146438_165149004
ES.1782.5	chr1	+	4363	2	NNC	ENSMUSG00000040836.16	novel	6862	6	NA	NA	22777	3070	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165152968	165157384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165156429_165156481
ES.1782.6	chr1	+	4440	1	Genic_Genomic	ENSMUSG00000040836.16	novel	NA	NA	NA	NA	22777	3094	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATAGCCTTAAATTGCAC	NA	False	NA	NA	False	NA	NA	NA	165152968	165157408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_165153000_165157400
ES.1782.7	chr1	+	4358	2	NNC	ENSMUSG00000040836.16	novel	6862	6	NA	NA	22777	3094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATAGCCTTAAATTGCAC	NA	False	NA	NA	False	NA	NA	NA	165152968	165157408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165156386_165156467
ES.17820.1	chr19	-	789	4	ISM	ENSMUSG00000061132.14	ENSMUST00000117695.8	1701	17	56306	8	56306	-8	3prime_fragment	FALSE	canonical	1	2	junction_3	16.5126214353344	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACAGGTGTGATGC	NA	False	NA	NA	False	AATAAA	-8	NA	40926285	40917378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094
ES.17820.2	chr19	-	609	3	NNC	ENSMUSG00000061132.14	novel	1701	17	NA	NA	58651	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACAGGTGTGATGC	NA	False	NA	NA	False	AATAAA	-8	NA	40923940	40917378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_40917737_40922870_40923027_40923845
ES.17821.1	chr19	-	1150	2	Intergenic	novelGene_14786	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTACTTCTTAGATGT	5311	False	NA	NA	False	ATTAAA	-15	NA	40995175	40993757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_40994553_40994820
ES.17822.1	chr19	+	173	1	Intergenic	novelGene_14787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGGTGGCACACGCC	7725	False	NA	NA	False	NA	NA	NA	41037113	41037286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41037100_41037300
ES.17823.1	chr19	-	2617	6	NNC	ENSMUSG00000050121.10	novel	1839	6	NA	NA	3551	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTGTTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	41062001	41050150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41052419_41054937_41054995_41056095_41056219_41058356_41058393_41060634_41060671_41061904
ES.17824.1	chr19	-	3800	3	ISM	ENSMUSG00000025013.16	ENSMUST00000025986.15	4658	21	117982	-1804	117921	1804	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTTCCGCGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	41077292	41069387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41072756_41074658_41074910_41077111
ES.17825.1	chr19	-	6901	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-30	-3701	-13	753	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTTAGTTCACAG	NA	False	NA	NA	False	TTTAAA	-25	NA	41252449	41198529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.11	chr19	-	3371	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-95	-106	-78	106	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAGGACACTCATTACA	NA	False	NA	77	True	AATAAA	-22	NA	41252514	41202124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.12	chr19	-	4374	13	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	16006	103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	332.180046561098	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAAGGACACTCATT	NA	False	NA	74	True	AATAAA	-19	NA	41236413	41202127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41221546_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344
ES.17825.13	chr19	-	2772	14	NNC	ENSMUSG00000025016.12	novel	8096	14	NA	NA	-51	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	313.55623864452	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATATAAAGCA	NA	False	NA	46	True	NA	NA	NA	41252487	41202155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203145_41205816_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.14	chr19	-	3406	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	373	75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	309.621394873263	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATATAAAGCA	NA	False	NA	46	True	NA	NA	NA	41252046	41202155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41251663
ES.17825.15	chr19	-	3272	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-100	-2	-83	2	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTGACAGTAGATGTG	NA	False	NA	-27	True	AATAAA	-17	NA	41252519	41202228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.16	chr19	-	3146	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252448	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41202436_41202488_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.18	chr19	-	2910	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252440	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203010_41203290_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.19	chr19	-	2957	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252301	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203181_41203275_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.2	chr19	-	6220	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-100	-2950	-83	2	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGCTTTCTTTCCTTTG	NA	False	NA	1	True	AATAAA	-22	NA	41252519	41199280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.21	chr19	-	3112	14	NIC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	320.103552032258	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252430	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.22	chr19	-	3165	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252484	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203449_41203518_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.23	chr19	-	2934	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	309.147948532143	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252242	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236403_41236468_41244583_41244780_41252197
ES.17825.24	chr19	-	3178	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	309.147948532143	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252445	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235225_41236344_41236468_41244583_41244780_41252197
ES.17825.27	chr19	-	3256	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	308.421135687513	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252512	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220906_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.28	chr19	-	3231	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	307.570076634279	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252426	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227338_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.29	chr19	-	4994	13	NIC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_7	325.844319934126	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252449	41202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.3	chr19	-	5921	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.604630060837	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGCTTTCTTTCCTTTG	NA	False	NA	1	True	AATAAA	-22	NA	41252431	41199280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41200728_41200906_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209713_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.30	chr19	-	1559	4	NNC	ENSMUSG00000025016.12	novel	8096	14	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	510.883548374774	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252418	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203249_41236340_41236468_41244583_41244780_41252197
ES.17825.31	chr19	-	3138	14	NIC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	313.55623864452	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252467	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41203579_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.32	chr19	-	3217	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	413.561189115779	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252477	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227128_41227284_41229011_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.34	chr19	-	5506	7	ISM	ENSMUSG00000025016.12	ENSMUST00000025989.10	8096	14	27765	2951	27748	-3	3prime_fragment	FALSE	canonical	3	1108	junction_4	44.9073119510249	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	7767	False	NA	-32	True	AATAAA	-12	NA	41224671	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119
ES.17825.39	chr19	-	3130	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252430	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203429_41203476_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.40	chr19	-	3173	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.691821604567	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252447	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203566_41205548_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.42	chr19	-	3165	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	309.781819205395	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGTGACAGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	41252441	41202233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223220_41227145_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.44	chr19	-	3136	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	307.235700253411	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTTTGTGACAGTA	NA	False	NA	-33	True	AATAAA	-11	NA	41252435	41202234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205608_41205823_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.46	chr19	-	2916	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-73	327	-56	-327	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCGCGTAGGTGTAGG	NA	False	NA	NA	False	AATAAA	-16	NA	41252492	41202557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.47	chr19	-	2707	14	NIC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-16	-329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	318.613546033398	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTCGCGTAGGTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	41252452	41202559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.48	chr19	-	2689	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-18	-329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTCGCGTAGGTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	41252454	41202559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41202605_41202791_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.5	chr19	-	6164	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.691821604567	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTTGCTTTCTTTCC	NA	False	NA	-3	True	AATAAA	-18	NA	41252486	41199284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203563_41205542_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.51	chr19	-	2855	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	0	-465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	403.869065691125	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAATGTCTAAAGTGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	41252436	41202695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41245034_41245168_41252197
ES.17825.52	chr19	-	2740	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-35	465	-18	-465	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAATGTCTAAAGTGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	41252454	41202695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.53	chr19	-	2689	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	4	-472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	309.147948532143	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTAACTGAATGTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	41252415	41202702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235234_41236340_41236468_41244583_41244780_41252197
ES.17825.54	chr19	-	2563	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-71	678	-54	-678	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTGTCATCTTAATC	NA	False	NA	NA	False	ATTAAA	-25	NA	41252490	41202908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.55	chr19	-	2489	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-5	-682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	309.872134590896	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATCTGCTGTCATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	41252441	41202912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244764_41252202
ES.17825.56	chr19	-	2565	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-52	-682	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	304.724700110022	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATCTGCTGTCATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	41252488	41202912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205778_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.57	chr19	-	2494	15	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-4	-684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	417.158903800948	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATATATCTGCTGTCATC	NA	False	NA	NA	False	ATTAAA	-19	NA	41252440	41202914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235236_41236344_41236468_41244589_41244780_41252197
ES.17825.58	chr19	-	2209	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-16	977	1	-977	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATAGTTTATTTAAAG	NA	False	NA	NA	False	ATTAAA	-33	NA	41252435	41203207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.59	chr19	-	2084	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	-36	1122	-19	-1122	multi-exon	FALSE	canonical	3	1017	junction_13	71.1689926176006	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGGTTCTTACTGACT	NA	False	NA	NA	False	NA	NA	NA	41252455	41203352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.6	chr19	-	5671	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.648119559519	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGATGCTTGCTTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	41252436	41199286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41202816_41203275_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.7	chr19	-	6092	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.648119559519	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGATGCTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-14	NA	41252446	41199288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41201035_41201081_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.8	chr19	-	5654	16	NNC	ENSMUSG00000025016.12	novel	3170	15	NA	NA	-44	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.604630060837	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTAATAAAAAATTA	NA	False	NA	-34	True	NA	NA	NA	41252480	41199315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41202318_41202776_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209728_41211538_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17825.9	chr19	-	8079	14	FSM	ENSMUSG00000025016.12	ENSMUST00000025989.10	8096	14	-16	33	-16	-33	multi-exon	FALSE	canonical	3	1017	junction_12	66.4790753216476	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTAATAAAAAATTA	NA	False	NA	-34	True	NA	NA	NA	41252452	41199315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ES.17826.1	chr19	-	3050	6	ISM	ENSMUSG00000025017.11	ENSMUST00000059672.9	4482	17	88172	-15	88172	15	3prime_fragment	FALSE	canonical	2	5	junction_4	1.6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGTGCTTTTTGAGGA	NA	False	NA	NA	False	AGTAAA	-6	NA	41285363	41260800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41262793_41270309_41270447_41271518_41271590_41275908_41276065_41281191_41281265_41284742
ES.17827.1	chr19	-	177	1	Intergenic	novelGene_14788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGGC	NA	False	NA	NA	False	NA	NA	NA	41411759	41411582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41411600_41411800
ES.17828.1	chr19	+	178	1	Intergenic	novelGene_14789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAAGAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	41411932	41412110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41411900_41412100
ES.17829.1	chr19	-	170	1	Intergenic	novelGene_14790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTGGAGCAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	41429092	41428922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41428900_41429100
ES.1783.1	chr1	-	150	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAACATAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	165125760	165125610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165125600_165125800
ES.17830.1	chr19	+	191	1	Intergenic	novelGene_14791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATCTACAAGCGG	NA	False	NA	NA	False	NA	NA	NA	41430316	41430507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41430300_41430500
ES.17831.1	chr19	+	2404	2	Genic_Genomic	ENSMUSG00000044065.4	novel	906	1	NA	NA	-9052	1311	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCAAGTCTGGGCTGA	NA	False	NA	NA	False	NA	NA	NA	41439199	41450468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_41439376_41448240
ES.17831.2	chr19	+	155	1	Intergenic	novelGene_14793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41441437	41441592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41441400_41441600
ES.17831.3	chr19	+	1132	1	FSM	ENSMUSG00000044065.4	ENSMUST00000057038.4	906	1	173	-399	173	399	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGGCTTTATCATGTA	NA	False	NA	NA	False	AATATA	-12	NA	41448424	41449556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41448400_41449600
ES.17832.1	chr19	-	177	1	Intergenic	novelGene_14792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41437713	41437536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41437500_41437700
ES.17832.2	chr19	-	176	2	Antisense	novelGene_ENSMUSG00000044065.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41464342	41437536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_41437588_41464217
ES.17832.3	chr19	-	159	1	Intergenic	novelGene_14794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	41454912	41454753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41454800_41454900
ES.17833.1	chr19	+	6317	7	NNC	ENSMUSG00000025019.18	novel	4663	3	NA	NA	-386	794	intron_retention	FALSE	canonical	0	0	junction_3	12.733376963276	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGACTCTTGTTTTCA	NA	False	NA	9	True	NA	NA	NA	41470689	41575769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41470758_41471965_41472040_41534313_41534447_41536495_41536603_41540887_41541176_41544046_41544141_41570216
ES.17833.10	chr19	+	6262	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	22	789	intron_retention	FALSE	canonical	1	2	junction_2	35.1590671093532	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATGAGTGACTCTTGT	NA	False	NA	4	True	NA	NA	NA	41471097	41575764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.11	chr19	+	6028	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	22	791	intron_retention	FALSE	canonical	1	3	junction_5	36.9918910032996	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGAGTGACTCTTGTTT	NA	False	NA	6	True	NA	NA	NA	41471097	41575766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41570216
ES.17833.12	chr19	+	2378	8	FSM	ENSMUSG00000025019.18	ENSMUST00000067795.13	4833	8	23	2432	23	48	multi-exon	FALSE	canonical	2	2	junction_7	35.0218590632322	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGGGTCATATGCT	NA	False	NA	NA	False	AAAACA	-38	NA	41471098	41548268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ES.17833.13	chr19	+	5874	7	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	30	343	intron_retention	FALSE	canonical	0	0	junction_3	38.9957262615619	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTGTTCTGTCACTGAA	NA	False	NA	NA	False	ACTAAA	-28	NA	41471105	41575318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.14	chr19	+	5898	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	34	291	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCTGATGTATGTGA	NA	False	NA	NA	False	TTTAAA	-14	NA	41471109	41575266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.16	chr19	+	6648	8	FSM	ENSMUSG00000025019.18	ENSMUST00000238398.2	5764	8	-94	-790	-94	790	multi-exon	FALSE	canonical	2	2	junction_1	34.4413135875021	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	5	True	NA	NA	NA	41471373	41575765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41471738_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.18	chr19	+	6288	7	ISM	ENSMUSG00000025019.18	ENSMUST00000238398.2	5764	8	496	-792	496	792	3prime_fragment	FALSE	canonical	3	26	junction_6	28.3161712728885	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGTGACTCTTGTTTT	NA	False	NA	7	True	NA	NA	NA	41471963	41575767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.19	chr19	+	172	1	Intergenic	novelGene_14796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAACATATGGACA	8977	False	NA	NA	False	NA	NA	NA	41492189	41492361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41492200_41492400
ES.17833.20	chr19	+	1696	1	Intergenic	novelGene_14797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	41513702	41515398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41513700_41515400
ES.17833.21	chr19	+	1215	1	Intergenic	novelGene_14798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTTTTTTCATTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	41513703	41514918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41513700_41514900
ES.17833.22	chr19	+	880	2	Intergenic	novelGene_14799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTCTTCCTTTTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	41513748	41514912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41514350_41514633
ES.17833.23	chr19	+	171	1	Intergenic	novelGene_14800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	41521093	41521264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41521100_41521300
ES.17833.24	chr19	+	1039	2	Intergenic	novelGene_14801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATATGCTCTTAACAT	1483	False	NA	NA	False	NA	NA	NA	41526846	41528711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41527798_41528623
ES.17833.25	chr19	+	3861	1	Intergenic	novelGene_14802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTAAAGCTTGGTT	2437	False	NA	7	True	AATAAA	-15	NA	41552219	41556080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41552200_41556100
ES.17833.26	chr19	+	4406	1	Intergenic	novelGene_14803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAGAATTGAGCCCTA	4383	False	NA	NA	False	NA	NA	NA	41554165	41558571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41554200_41558600
ES.17833.3	chr19	+	5504	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	1	246	intron_retention	FALSE	canonical	1	3	junction_5	36.9918910032996	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCCTTATTTATCCT	NA	False	NA	NA	False	NA	NA	NA	41471076	41575221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41570216
ES.17833.4	chr19	+	6433	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	2	794	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGACTCTTGTTTTCA	NA	False	NA	9	True	NA	NA	NA	41471077	41575769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17833.6	chr19	+	5910	5	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	11	795	intron_retention	FALSE	canonical	1	3	junction_4	41.0510353097215	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACTCTTGTTTTCAT	NA	False	NA	10	True	NA	NA	NA	41471086	41575770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41570216
ES.17833.7	chr19	+	6621	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	11	991	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGACCGGAATGTCGGAA	NA	False	NA	NA	False	AGTAAA	-45	NA	41471086	41575966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ES.17834.1	chr19	-	1153	10	Antisense	novelGene_ENSMUSG00000025019.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	41541086	41464345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_41464404_41464495_41464643_41467445_41467565_41470073_41470154_41470559_41470756_41471963_41472040_41516459_41516525_41516999_41517078_41534311_41534445_41540885
ES.17834.2	chr19	-	957	9	Antisense	novelGene_ENSMUSG00000025019.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	41541086	41464345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_41464404_41464495_41464643_41467445_41467565_41470073_41470154_41471964_41472040_41516459_41516524_41516997_41517078_41534311_41534445_41540885
ES.17834.3	chr19	-	175	1	Intergenic	novelGene_14795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAATGTCAATCTAA	NA	False	NA	NA	False	NA	NA	NA	41478849	41478674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41478700_41478800
ES.17835.1	chr19	+	7731	1	FSM	ENSMUSG00000098286.3	ENSMUST00000183602.3	139	1	-220	-7372	-220	7372	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTGTGTAGTCACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	41576869	41584600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41576900_41584600
ES.17835.2	chr19	+	3439	1	Intergenic	novelGene_14805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGAGTGATGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	41578918	41582357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41578900_41582400
ES.17836.1	chr19	-	5644	1	Intergenic	novelGene_14804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCAGCAAGGAATCCCA	NA	False	NA	NA	False	NA	NA	NA	41583628	41577984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41578000_41583600
ES.17837.1	chr19	-	3524	18	NNC	ENSMUSG00000025020.12	novel	5045	37	NA	NA	-25958	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.7310516434779	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTGTGAGGTCAGG	NA	False	NA	NA	False	NA	NA	NA	41622927	41588697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41589184_41589416_41590140_41590525_41590815_41591764_41591920_41592750_41592882_41594798_41595028_41596756_41596895_41599239_41599334_41599440_41599581_41602840_41602939_41603228_41603354_41605103_41605268_41612936_41613009_41613960_41614033_41615679_41615752_41618308_41618378_41619202_41619336_41622593
ES.17837.2	chr19	-	2618	17	ISM	ENSMUSG00000025020.12	ENSMUST00000025993.10	5045	37	112774	1	-22361	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.78426280295252	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTGTGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	41619330	41588698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41589129_41589927_41590140_41590525_41590815_41591764_41591920_41592750_41592882_41594798_41595028_41596756_41596895_41599239_41599334_41599440_41599581_41602840_41602939_41603228_41603354_41605103_41605268_41612936_41613009_41613960_41614033_41615679_41615752_41618308_41618378_41619202
ES.17837.3	chr19	-	1682	8	NNC	ENSMUSG00000025020.12	novel	5045	37	NA	NA	-731	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.35606035749581	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGTGTGTGAGGTCA	NA	False	NA	NA	False	NA	NA	NA	41597700	41588699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41589129_41589927_41590140_41590525_41590815_41591764_41591920_41592750_41592882_41594798_41595028_41596756_41596895_41597601
ES.17837.4	chr19	-	178	1	Intergenic	novelGene_14806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACCAAAAATTAAG	NA	False	NA	NA	False	NA	NA	NA	41620870	41620692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41620700_41620900
ES.17838.1	chr19	+	2325	4	Intergenic	novelGene_14807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTCCTATCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	41735312	41739233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41735644_41735983_41736194_41736890_41737011_41737569
ES.17839.1	chr19	+	1142	2	Antisense	novelGene_ENSMUSG00000025154.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTACAACCTTCTCCTAA	NA	False	NA	NA	False	AATAAA	-11	NA	41753956	41755137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_41754264_41754302
ES.1784.1	chr1	-	166	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAGCACTTGTTACT	NA	False	NA	NA	False	NA	NA	NA	165143003	165142837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165142800_165143000
ES.17840.1	chr19	+	175	1	Intergenic	novelGene_14808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	41777282	41777457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41777300_41777500
ES.17841.1	chr19	+	3696	1	Intergenic	novelGene_14809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACATCAAAATTCCCT	NA	False	NA	NA	False	NA	NA	NA	41783131	41786827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41783100_41786800
ES.17841.2	chr19	+	180	1	Intergenic	novelGene_14810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCCAAAGCGGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	41785639	41785819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41785600_41785800
ES.17842.1	chr19	-	3547	16	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-8	9346	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	159.679122687414	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATATAATATAATATAA	4519	False	NA	NA	False	NA	NA	NA	41790494	41745680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41746477_41746560_41747001_41747062_41747480_41747617_41747734_41758359_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.11	chr19	-	5164	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.877843516642	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4523	False	NA	NA	False	ATTAAA	-16	NA	41790490	41755027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761430_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.12	chr19	-	5113	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	109.642393924314	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4510	False	NA	NA	False	ATTAAA	-16	NA	41790503	41755027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776820_41780185_41780452_41790410
ES.17842.13	chr19	-	5119	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	108.94141271784	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4529	False	NA	NA	False	ATTAAA	-16	NA	41790484	41755027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775226_41776744_41776826_41780185_41780452_41790410
ES.17842.14	chr19	-	5013	11	NNC	ENSMUSG00000025154.16	novel	1812	11	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	146.549513817003	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGGGTTCTGACTGG	4542	False	NA	NA	False	ATTAAA	-15	NA	41790471	41755028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776738_41776826_41780185_41780452_41790410
ES.17842.15	chr19	-	4999	11	NIC	ENSMUSG00000025154.16	novel	1652	12	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	114.838843602677	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGGGTTCTGACTGG	4518	False	NA	NA	False	ATTAAA	-15	NA	41790495	41755028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.18	chr19	-	6024	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	14	-2	intron_retention	FALSE	canonical	3	297	junction_1	41.1714707048461	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGGGTTCTGACTGG	4541	False	NA	NA	False	ATTAAA	-15	NA	41790472	41755028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41758636_41761488_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.19	chr19	-	5056	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.877843516642	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4529	False	NA	NA	False	ATTAAA	-14	NA	41790484	41755029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758594_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.2	chr19	-	2649	15	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	14	8754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.704930969641	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGGTCTCTCTCTACA	4541	False	NA	NA	False	AATAAA	-18	NA	41790472	41746272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41746477_41746560_41747001_41747070_41747480_41747617_41747734_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.20	chr19	-	5131	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	107.977653029314	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4510	False	NA	NA	False	ATTAAA	-14	NA	41790503	41755029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761582_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.21	chr19	-	5055	13	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.471527226809	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4529	False	NA	NA	False	ATTAAA	-14	NA	41790484	41755029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761568_41762504_41762532_41762574_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.22	chr19	-	4996	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	108.676637646957	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4529	False	NA	NA	False	ATTAAA	-14	NA	41790484	41755029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775105_41776744_41776826_41780185_41780452_41790410
ES.17842.24	chr19	-	8843	10	NIC	ENSMUSG00000025154.16	novel	1652	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	21	junction_3	114.39794092941	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	4529	False	NA	NA	False	ATTAAA	-14	NA	41790484	41755029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.25	chr19	-	6679	11	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	7	junction_2	112.510266198245	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATCTGTGGGTTCTGACT	4520	False	NA	NA	False	ATTAAA	-13	NA	41790493	41755030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761582_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.26	chr19	-	5006	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-7	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	114.705753996912	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATCTGTGGGTTCTGAC	4520	False	NA	NA	False	ATTAAA	-12	NA	41790493	41755031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.28	chr19	-	4830	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	104.907387728415	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATCTGTGGGTTCTGAC	4529	False	NA	NA	False	ATTAAA	-12	NA	41790484	41755031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41790410
ES.17842.29	chr19	-	4006	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	2	1095	2	-1095	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGCGTAGTCTTTGTG	4529	False	NA	NA	False	NA	NA	NA	41790484	41756121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.3	chr19	-	5200	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	-88	-9	-88	9	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTGGTCTCTTGGCTC	4439	False	NA	NA	False	ATTAAA	-26	NA	41790574	41755017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.30	chr19	-	4820	11	NIC	ENSMUSG00000025154.16	novel	1652	12	NA	NA	-5	116	intron_retention	FALSE	canonical	3	21	junction_4	108.908264149237	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGAGTAATCTCTTT	4522	False	NA	NA	False	NA	NA	NA	41790491	41758122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.31	chr19	-	4327	11	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	2	-235	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	112.864033243545	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAATTGTCTTGTTTCT	4529	False	NA	NA	False	ATTAAA	-21	NA	41790484	41758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41761582_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.32	chr19	-	4311	11	ISM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	-1	3646	-1	-240	5prime_fragment	FALSE	canonical	3	296	junction_1	41.3177927774464	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTCTAATTGTCTTG	4526	False	NA	NA	False	ATTAAA	-16	NA	41790487	41758672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.33	chr19	-	2322	11	ISM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	0	5634	0	-2228	5prime_fragment	FALSE	canonical	3	296	junction_1	41.3177927774464	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAAGTATGAGTTTT	4527	False	NA	NA	False	TTTAAA	-33	NA	41790486	41760660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.5	chr19	-	5030	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	112.434380862795	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4519	False	NA	NA	False	ATTAAA	-17	NA	41790494	41755026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41780185_41780452_41790410
ES.17842.6	chr19	-	5128	12	NNC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	106.826498709104	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4508	False	NA	NA	False	ATTAAA	-17	NA	41790505	41755026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776738_41776826_41780185_41780452_41790410
ES.17842.7	chr19	-	5066	12	FSM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	-8	-3406	-8	0	multi-exon	FALSE	canonical	3	21	junction_5	104.114844409653	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4519	False	NA	NA	False	ATTAAA	-17	NA	41790494	41755026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17842.9	chr19	-	5039	11	FSM	ENSMUSG00000025154.16	ENSMUST00000163265.9	1812	11	-16	-3211	-16	-1	multi-exon	FALSE	canonical	3	6	junction_1	113.148398132718	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGGTTCTGACTGGT	4511	False	NA	NA	False	ATTAAA	-16	NA	41790502	41755027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41758636_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ES.17843.1	chr19	+	2575	1	FSM	ENSMUSG00000067199.5	ENSMUST00000087155.5	2614	1	35	4	35	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCCGGCTTTTATTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	41818443	41821018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41818400_41821000
ES.17844.1	chr19	-	2141	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTGTTTTTGTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	41836551	41834410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41834400_41836600
ES.17844.2	chr19	-	1197	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	32	932	32	-932	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATAGTAGATATGATCT	NA	False	NA	NA	False	NA	NA	NA	41836539	41835342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41835300_41836500
ES.17845.1	chr19	+	176	1	Intergenic	novelGene_14811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTTAAAAAAAAA	9862	False	NA	NA	False	NA	NA	NA	41858657	41858833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41858700_41858800
ES.17846.1	chr19	-	7785	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-21	-3424	-21	3424	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATTGTCTGTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	41884633	41847865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.11	chr19	-	4383	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-36	-7	-36	7	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTTGGCCCCTTCC	NA	False	NA	-1	True	AATAAA	-27	NA	41884648	41851282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.13	chr19	-	4290	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	95.4392772781883	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTTGGCCCCTTCC	NA	False	NA	-1	True	AATAAA	-27	NA	41884607	41851282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861401_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865932_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.16	chr19	-	4531	33	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-23	6	intron_retention	FALSE	canonical	1	1	junction_18	74.5026150442889	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGCTTGGCCCCTTC	NA	False	NA	-2	True	AATAAA	-26	NA	41884635	41851283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866613_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.19	chr19	-	4384	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-7	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	94.7439737889944	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGCTTGGCCCCTTC	NA	False	NA	-2	True	AATAAA	-26	NA	41884619	41851283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868793_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878480_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.2	chr19	-	5240	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-29	-871	-29	871	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGAGTTTCTGTTTTGGTT	NA	False	NA	-8	True	NA	NA	NA	41884641	41850418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.20	chr19	-	5787	31	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-24	6	intron_retention	FALSE	canonical	3	269	junction_16	41.5744178819406	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGCTTGGCCCCTTC	NA	False	NA	-2	True	AATAAA	-26	NA	41884636	41851283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866533_41868540_41868663_41868797_41868941_41870597_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.21	chr19	-	3281	27	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	9382	6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_26	81.7268234341642	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGGCTTGGCCCCTTC	NA	False	NA	-2	True	AATAAA	-26	NA	41875230	41851283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875179
ES.17846.22	chr19	-	4447	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	5	intron_retention	FALSE	canonical	3	269	junction_15	40.5354782875446	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTGGCTTGGCCCCTT	NA	False	NA	-3	True	AATAAA	-25	NA	41884607	41851284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.23	chr19	-	4437	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-10	4	intron_retention	FALSE	canonical	3	269	junction_16	39.2626870418977	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTTGGCCCCT	NA	False	NA	-4	True	AATAAA	-24	NA	41884622	41851285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.24	chr19	-	4302	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	73.8816093129678	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTTGGCCCCT	NA	False	NA	-4	True	AATAAA	-24	NA	41884621	41851285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872257_41874129_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.27	chr19	-	4353	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	73.9217440434426	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGATGAGTGGCTTGGCC	NA	False	NA	-7	True	AATAAA	-21	NA	41884633	41851288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878213_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.29	chr19	-	5653	32	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	3	0	intron_retention	FALSE	canonical	3	300	junction_15	37.1992693471038	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGATGAGTGGCTTGGC	NA	False	NA	-8	True	AATAAA	-20	NA	41884609	41851289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.30	chr19	-	4396	35	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.4235249672214	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGATGAGTGGCTTGG	NA	False	NA	-9	True	AATAAA	-19	NA	41884607	41851290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857063_41857126_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.32	chr19	-	4313	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	73.6975553206397	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGATGAGTGGCTTGG	NA	False	NA	-9	True	AATAAA	-19	NA	41884624	41851290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870675_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.33	chr19	-	4052	33	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.6035089922275	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGATGAGTGGCTTGG	NA	False	NA	-9	True	AATAAA	-19	NA	41884637	41851290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851565_41854001_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.35	chr19	-	4499	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	-3	intron_retention	FALSE	canonical	3	300	junction_15	36.8432066329737	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCTGATGAGTGGCTT	NA	False	NA	-11	True	AATAAA	-17	NA	41884607	41851292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.37	chr19	-	3883	33	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	909	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	74.891144962205	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCCTGATGAGTGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	41883703	41851293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859737_41859958_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586
ES.17846.38	chr19	-	4410	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	73.3757202820212	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCCTGATGAGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	41884607	41851294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866613_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.4	chr19	-	5198	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	73.8816093129678	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATGTTCTTAAGGAG	NA	False	NA	-22	True	NA	NA	NA	41884607	41850432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874079_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.41	chr19	-	4330	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	73.9766299681925	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCCTGATGAGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	41884609	41851294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878316_41878503_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.42	chr19	-	4485	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	269	junction_15	39.8575466309393	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCCTGATGAGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	41884619	41851294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.44	chr19	-	4319	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	95.3313587034706	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCCTGATGAGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	41884607	41851294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865924_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875454_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.49	chr19	-	4355	34	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	73.6975553206397	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGCCCTGATGAGTG	NA	False	NA	-15	True	AATAAA	-13	NA	41884626	41851296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871853_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.5	chr19	-	6340	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	856	intron_retention	FALSE	canonical	3	269	junction_16	40.2715392678254	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACATGTTCTTAAGGA	NA	False	NA	-23	True	NA	NA	NA	41884607	41850433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.52	chr19	-	4170	33	NNC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.6035089922275	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGCCCTGATGAGTG	NA	False	NA	-15	True	AATAAA	-13	NA	41884634	41851296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41851650_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.53	chr19	-	4243	33	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	5	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	75.0676517799112	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCAGCCCTGATGAGT	NA	False	NA	-16	True	AATAAA	-12	NA	41884607	41851297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41883586_41883817_41884377
ES.17846.55	chr19	-	4175	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-22	187	-22	-187	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGTCCTTTGGAGACAT	NA	False	NA	NA	False	NA	NA	NA	41884634	41851476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.7	chr19	-	6582	31	NIC	ENSMUSG00000035049.5	novel	4340	34	NA	NA	3	847	intron_retention	FALSE	canonical	3	300	junction_15	37.8054081963003	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCTACAACATACATGT	NA	False	NA	-32	True	NA	NA	NA	41884609	41850442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865930_41866222_41866533_41868540_41868663_41868797_41868941_41870597_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.8	chr19	-	4992	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	-7	-645	-7	645	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTACTGAGTTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	41884619	41850644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17846.9	chr19	-	4671	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	5	-336	5	336	multi-exon	FALSE	canonical	3	269	junction_16	39.9184430265499	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCGGCTCTCGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	41884607	41850953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ES.17847.1	chr19	+	1854	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-74	-5	-74	5	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTGTGTCTGTG	3986	False	NA	5	True	AATAAA	-22	NA	41900287	41907104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ES.17847.11	chr19	+	3241	2	FSM	ENSMUSG00000011752.8	ENSMUST00000235468.2	593	2	-78	-2570	-40	-4	multi-exon	FALSE	canonical	3	6273	junction_1	0	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	4135	False	NA	-4	True	AATAAA	-13	NA	41900436	41907095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41900626_41904043
ES.17847.12	chr19	+	5098	3	NIC	ENSMUSG00000011752.8	novel	1775	4	NA	NA	-17	3	intron_retention	FALSE	canonical	3	5418	junction_1	175	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTGTCTTGTGTCTG	4158	False	NA	3	True	AATAAA	-20	NA	41900459	41907102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41904319_41905081_41905263_41906044
ES.17847.16	chr19	+	1556	4	NNC	ENSMUSG00000011752.8	novel	1775	4	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2845.56922639781	1843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	4183	False	NA	-4	True	AATAAA	-13	NA	41900484	41907095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41900626_41904043_41904227_41905081_41905263_41906044
ES.17847.2	chr19	+	6014	2	NIC	ENSMUSG00000011752.8	novel	1775	4	NA	NA	-58	0	intron_retention	FALSE	canonical	3	5768	junction_1	0	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACTGTTTGTCTTGTGT	4002	False	NA	0	True	AATAAA	-17	NA	41900303	41907099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41905263_41906044
ES.17847.3	chr19	+	2588	3	NIC	ENSMUSG00000011752.8	novel	1775	4	NA	NA	-54	-4	intron_retention	FALSE	canonical	3	5768	junction_2	252.5	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	4006	False	NA	-4	True	AATAAA	-13	NA	41900307	41907095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41900626_41904043_41905263_41906044
ES.17847.4	chr19	+	1640	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-54	189	-54	-189	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTTTGGATCCCTTG	4006	False	NA	NA	False	GATAAA	-15	NA	41900307	41906910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ES.17847.5	chr19	+	1701	4	FSM	ENSMUSG00000011752.8	ENSMUST00000237510.2	617	4	-151	-933	-36	-4	multi-exon	FALSE	canonical	2	120	junction_1	2583.95063592339	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	4024	False	NA	-4	True	AATAAA	-13	NA	41900325	41907095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41900561_41904084_41904319_41905081_41905263_41906044
ES.17847.6	chr19	+	1542	4	NNC	ENSMUSG00000011752.8	novel	1775	4	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2639.49304896898	1843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTGTCTTGTGTCTG	4026	False	NA	3	True	AATAAA	-20	NA	41900327	41907102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41900397_41904084_41904319_41905081_41905263_41906044
ES.17847.7	chr19	+	3265	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-25	-1465	-25	1465	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCGGCTTTTTAAAATT	4035	False	NA	NA	False	NA	NA	NA	41900336	41908564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ES.17847.8	chr19	+	1038	2	NNC	ENSMUSG00000011752.8	novel	593	2	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	4065	False	NA	-4	True	AATAAA	-13	NA	41900366	41907095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41900575_41906265
ES.17848.1	chr19	+	1854	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	-42	9	-32	0	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4097	False	NA	9	True	AATAAA	-15	NA	41921886	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.10	chr19	+	2038	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	128.229832722343	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4131	False	NA	9	True	AATAAA	-15	NA	41921920	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930664_41932020
ES.17848.11	chr19	+	2706	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	-4	intron_retention	FALSE	canonical	3	31	junction_5	150.41861586918	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4131	False	NA	14	True	AATAAA	-20	NA	41921920	41932539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41928295_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.12	chr19	+	2828	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	-4	intron_retention	FALSE	canonical	3	31	junction_5	126.989743923391	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4132	False	NA	14	True	AATAAA	-20	NA	41921921	41932539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.13	chr19	+	1906	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	121.95691862293	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4133	False	NA	9	True	AATAAA	-15	NA	41921922	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.14	chr19	+	3891	9	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	37	junction_4	131.816871074988	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4133	False	NA	9	True	AATAAA	-15	NA	41921922	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.15	chr19	+	1848	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	129.221863475188	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4133	False	NA	9	True	AATAAA	-15	NA	41921922	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929924_41930079_41930374_41930446_41932020
ES.17848.16	chr19	+	1835	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	-966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	128.229832722343	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGTACAAGTATT	4133	False	NA	NA	False	NA	NA	NA	41921922	41931069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930450_41930542
ES.17848.18	chr19	+	1931	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	164.138965513981	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4138	False	NA	9	True	AATAAA	-15	NA	41921927	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929924_41930079_41930374_41930446_41932020
ES.17848.2	chr19	+	4330	9	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	397	junction_4	18.1779399272855	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4117	False	NA	14	True	AATAAA	-20	NA	41921906	41932539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41929175_41929954_41930079_41930374
ES.17848.20	chr19	+	1741	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.333091468546	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATATGTAGCTTCT	4139	False	NA	8	True	AATAAA	-14	NA	41921928	41932533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923246_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.21	chr19	+	1656	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	126.784226148208	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4139	False	NA	9	True	AATAAA	-15	NA	41921928	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932176
ES.17848.22	chr19	+	2574	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	323	junction_6	36.439023987146	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4140	False	NA	9	True	AATAAA	-15	NA	41921929	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.23	chr19	+	1663	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	135.411672272572	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATATGTAGCTTCT	4141	False	NA	8	True	AATAAA	-14	NA	41921930	41932533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.24	chr19	+	1682	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.068289755805	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATATGTAGCTTCT	4142	False	NA	8	True	AATAAA	-14	NA	41921931	41932533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922074_41923271_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.25	chr19	+	1754	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.509845185607	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4143	False	NA	9	True	AATAAA	-15	NA	41921932	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41930008_41930079_41930374_41930446_41932020
ES.17848.26	chr19	+	1702	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	129.501196905666	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4144	False	NA	9	True	AATAAA	-15	NA	41921933	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926552_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.27	chr19	+	1731	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	128.503735354269	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4148	False	NA	9	True	AATAAA	-15	NA	41921937	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928110_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.28	chr19	+	3667	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	86	junction_6	109.289738372732	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4149	False	NA	9	True	AATAAA	-15	NA	41921938	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.3	chr19	+	1960	12	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	163.079659082951	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4124	False	NA	9	True	AATAAA	-15	NA	41921913	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.30	chr19	+	3462	10	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	37	junction_5	123.549460281308	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4149	False	NA	9	True	AATAAA	-15	NA	41921938	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374
ES.17848.31	chr19	+	4149	7	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	397	junction_4	22.5831795812724	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4149	False	NA	9	True	AATAAA	-15	NA	41921938	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41927276_41928038_41930446_41932020
ES.17848.32	chr19	+	3497	9	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	10	-1	intron_retention	FALSE	canonical	3	397	junction_4	21.6011429095777	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATATGTAGCTTCT	4149	False	NA	8	True	AATAAA	-14	NA	41921938	41932533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41930079_41930374_41930446_41932020
ES.17848.33	chr19	+	2478	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	10	0	intron_retention	FALSE	canonical	1	3	junction_5	160.986158441888	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4149	False	NA	9	True	AATAAA	-15	NA	41921938	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41928126_41928173_41928295_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.34	chr19	+	1819	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	162.423643599077	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4150	False	NA	9	True	AATAAA	-15	NA	41921939	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923246_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.35	chr19	+	3789	9	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	397	junction_3	22.1073375828027	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4150	False	NA	9	True	AATAAA	-15	NA	41921939	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.37	chr19	+	3383	10	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	11	2	11	-2	intron_retention	FALSE	canonical	3	323	junction_7	35.8653173365902	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTAGCTTCTCTGTGCCT	4150	False	NA	16	True	AATAAA	-22	NA	41921939	41932541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374
ES.17848.39	chr19	+	1784	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	128.229832722343	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4153	False	NA	9	True	AATAAA	-15	NA	41921942	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930432_41932020
ES.17848.4	chr19	+	1772	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	162.839169247827	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4125	False	NA	9	True	AATAAA	-15	NA	41921914	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923278_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.40	chr19	+	1640	12	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	198.362428127309	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATATGTAGCTTCT	4160	False	NA	8	True	AATAAA	-14	NA	41921949	41932533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926169_41926253_41926290_41926461_41926657_41926802_41926892_41928126_41928173_41928295_41928344_41929088_41929175_41929954_41930083_41930374_41930446_41932020
ES.17848.42	chr19	+	3844	8	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	16	0	intron_retention	FALSE	canonical	3	31	junction_5	141.177699574483	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4187	False	NA	9	True	AATAAA	-15	NA	41921976	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41930446_41932020
ES.17848.43	chr19	+	3882	9	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	17	-4	intron_retention	FALSE	canonical	1	10	junction_8	135.694452263164	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4188	False	NA	14	True	AATAAA	-20	NA	41921977	41932539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41929175_41929954_41930079_41930374_41930881_41932020
ES.17848.45	chr19	+	1639	10	ISM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	1245	9	1213	0	3prime_fragment	FALSE	canonical	3	323	junction_6	38.8638014317745	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	5384	False	NA	9	True	AATAAA	-15	NA	41923173	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.46	chr19	+	5106	5	ISM	ENSMUSG00000025157.9	ENSMUST00000225968.2	1561	10	-26	0	-26	0	intron_retention	FALSE	canonical	3	31	junction_3	171.938215647366	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	8291	False	NA	9	True	AATAAA	-15	NA	41926080	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038
ES.17848.6	chr19	+	2740	10	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	397	junction_4	20.8439232344218	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4127	False	NA	9	True	AATAAA	-15	NA	41921916	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.7	chr19	+	3507	9	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	397	junction_4	19.1294929363013	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTAGCTTCTCTGTGC	4128	False	NA	14	True	AATAAA	-20	NA	41921917	41932539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41929175_41929954_41930079_41930374_41930446_41932020
ES.17848.8	chr19	+	1868	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	4131	False	NA	9	True	AATAAA	-15	NA	41921920	41932534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ES.17849.1	chr19	-	181	2	Antisense	novelGene_ENSMUSG00000025157.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAATGAAAGAA	8232	False	NA	NA	False	NA	NA	NA	41925065	41892311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_41892331_41924903
ES.17849.10	chr19	-	2047	5	NIC	ENSMUSG00000034321.15	novel	2296	6	NA	NA	-2	-75	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	395.881611090993	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTATAATTGTGTGC	NA	False	NA	NA	False	TTTAAA	-17	NA	41921739	41910805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41919794_41919870_41921487_41921604_41921690
ES.17849.11	chr19	-	1633	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-16	-599	-14	599	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTGTGCCTGTGGG	NA	False	NA	0	True	AATAAA	-30	NA	41921751	41911405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.12	chr19	-	1659	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-2	598	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	317.627107772364	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACTGTTGTGCCTGTGG	NA	False	NA	-1	True	AATAAA	-29	NA	41921739	41911406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921448_41921604_41921690
ES.17849.13	chr19	-	1518	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-2	585	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGTTTAGTGAAAACT	NA	False	NA	-14	True	AATAAA	-16	NA	41921739	41911419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
ES.17849.14	chr19	-	3130	6	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	0	583	intron_retention	FALSE	canonical	3	40	junction_4	350.503980005934	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTATGTTTAGTGAAAA	NA	False	NA	-16	True	AATAAA	-14	NA	41921735	41911421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41921604_41921690
ES.17849.15	chr19	-	1067	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-16	-33	-14	33	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTCTCTCTCTCTCTT	NA	False	NA	0	True	NA	NA	NA	41921751	41911971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.18	chr19	-	4994	5	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	2200	27	intron_retention	TRUE	non_canonical	0	0	junction_4	406.022474747396	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGATATAGTCTCTCTC	NA	False	NA	-6	True	NA	NA	NA	41919487	41911977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41917829_41918037
ES.17849.19	chr19	-	5525	7	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	1	14	intron_retention	FALSE	non_canonical	0	0	junction_4	343.323300824294	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTCATTTGTTAGTGA	NA	False	NA	-19	True	TATAAA	-36	NA	41921736	41911990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41917835_41918043_41919870_41921487_41921604_41921690
ES.17849.2	chr19	-	179	1	Intergenic	novelGene_14812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTCCAC	3079	False	NA	NA	False	NA	NA	NA	41897728	41897549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41897500_41897700
ES.17849.20	chr19	-	939	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-1	7	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATTCTTTTCATTTG	NA	False	NA	-26	True	TATAAA	-29	NA	41921738	41911997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
ES.17849.21	chr19	-	1274	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-23	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.15113632945	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATTCTTTTCATTTG	NA	False	NA	-26	True	TATAAA	-29	NA	41921710	41911997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921213_41921604_41921690
ES.17849.22	chr19	-	1067	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	317.627107772364	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAATTCTTTTCATT	NA	False	NA	-28	True	TATAAA	-27	NA	41921740	41911999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921448_41921604_41921690
ES.17849.23	chr19	-	1184	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	318.833460462048	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAATTCTTTTCATT	NA	False	NA	-28	True	TATAAA	-27	NA	41921746	41911999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912678_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.25	chr19	-	879	6	FSM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	135	1282	8	-8	multi-exon	FALSE	canonical	3	144	junction_3	310.084246616948	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGCTATGACTGGAAAA	NA	False	NA	-41	True	TATAAA	-14	NA	41921727	41912012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41919794_41919870_41921487_41921604_41921690
ES.17849.26	chr19	-	1330	6	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-14	-8	intron_retention	FALSE	canonical	3	40	junction_3	354.068693899927	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGCTATGACTGGAAAA	NA	False	NA	-41	True	TATAAA	-14	NA	41921751	41912012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
ES.17849.27	chr19	-	2516	6	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	899	junction_2	35.6572573258236	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGCTATGACTGGAAAA	NA	False	NA	-41	True	TATAAA	-14	NA	41921695	41912012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41916553_41919794_41919870_41921487
ES.17849.28	chr19	-	1409	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	822	junction_6	67.1501220318243	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGCTATGACTGGAAAA	NA	False	NA	-41	True	TATAAA	-14	NA	41921741	41912012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.29	chr19	-	5758	6	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-9	-8	intron_retention	TRUE	non_canonical	0	0	junction_5	366.833259124633	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGCTATGACTGGAAAA	NA	False	NA	-41	True	TATAAA	-14	NA	41921746	41912012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41917826_41918035
ES.17849.3	chr19	-	5615	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-5	-4592	-3	3318	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCCCTCCAATCCTTC	NA	False	NA	NA	False	NA	NA	NA	41921740	41907412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.30	chr19	-	974	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-14	-9	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	344.795913871122	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGCTATGACTGGAAA	NA	False	NA	-42	True	TATAAA	-13	NA	41921751	41912013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.32	chr19	-	3465	7	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	1	-71	intron_retention	FALSE	non_canonical	0	0	junction_3	349.840638322969	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAACAAAATCATGTAAT	NA	False	NA	-104	True	TTTAAA	-8	NA	41921736	41912075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913689_41913922_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.33	chr19	-	937	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	6	-119	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	323.464157557665	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATTTTTATACTCTG	NA	False	NA	NA	False	AAGAAA	-31	NA	41921729	41912123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921443_41921604_41921690
ES.17849.34	chr19	-	893	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-11	136	-9	-136	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACTATTTTTGGGAAA	NA	False	NA	NA	False	AAGAAA	-14	NA	41921746	41912140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.35	chr19	-	687	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-17	348	-15	-348	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGCAATGGTCTTTAT	NA	False	NA	-8	True	TATAAA	-9	NA	41921752	41912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.36	chr19	-	1474	4	Antisense	novelGene_ENSMUSG00000025157.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAATCG	6437	False	NA	NA	False	NA	NA	NA	41926860	41922349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_41923321_41926039_41926289_41926460_41926655_41926800
ES.17849.4	chr19	-	4465	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-4	-3443	-2	2169	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCATGCCTTTAATACC	NA	False	NA	NA	False	NA	NA	NA	41921739	41908561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.5	chr19	-	4351	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	-5	2141	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	41921742	41908589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
ES.17849.6	chr19	-	4299	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-7	-3274	-5	2000	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAAGTGGTGGTGGTGT	NA	False	NA	NA	False	TATAAA	-24	NA	41921742	41908730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.7	chr19	-	6829	3	NNC	ENSMUSG00000034321.15	novel	2296	6	NA	NA	5092	1820	intron_retention	TRUE	non_canonical	0	0	junction_2	489.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTCTTCAATTTTGA	432	False	NA	NA	False	TATAAA	-19	NA	41916595	41908910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41912528_41913149_41913689_41913922
ES.17849.8	chr19	-	4103	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	5	-3090	5	1816	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATCAGTTCTTCAATT	NA	False	NA	NA	False	TATAAA	-15	NA	41921730	41908914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.17849.9	chr19	-	2320	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	-29	-1273	-27	-1	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGAGTCCGTTCTC	NA	False	NA	NA	False	NA	NA	NA	41921764	41910731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ES.1785.1	chr1	-	3401	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	-93	802	-83	5	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATTC	NA	False	NA	3	True	ATTAAA	-29	NA	165288127	165157068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.10	chr1	-	2885	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	2	1223	2	-416	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATGTTCTGAGATTTG	NA	False	NA	NA	False	AATAAA	-18	NA	165288032	165157489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.11	chr1	-	2933	15	ISM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	-86	10792	-76	-9985	5prime_fragment	FALSE	canonical	3	37	junction_11	4.35245649616632	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTCTGTCTCTCCTTGC	NA	False	NA	NA	False	ACTAAA	-12	NA	165288120	165167058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.12	chr1	-	3638	2	ISM	ENSMUSG00000026571.13	ENSMUST00000193353.2	3034	7	175	18490	175	3063	internal_fragment	FALSE	canonical	3	42	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAAAGACTTC	5343	False	NA	NA	False	NA	NA	NA	165179392	165175563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165178850_165179040
ES.1785.13	chr1	-	3299	12	FSM	ENSMUSG00000026571.13	ENSMUST00000195686.2	2213	12	-76	-1010	-76	1010	multi-exon	FALSE	canonical	0	0	junction_1	17.2017681197684	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGTGTGGTAGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	165288120	165193600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165195075_165198691_165198818_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.14	chr1	-	3084	11	NIC	ENSMUSG00000026571.13	novel	2213	12	NA	NA	2	1009	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	12.140840168621	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGGTGTGGTAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	165288032	165193601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165195075_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.15	chr1	-	287	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATAAATAAAT	9518	False	NA	NA	False	NA	NA	NA	165209604	165209317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165209300_165209600
ES.1785.16	chr1	-	1761	10	ISM	ENSMUSG00000026571.13	ENSMUST00000195686.2	2213	12	1	21477	1	-21477	5prime_fragment	FALSE	canonical	3	37	junction_6	4.58930587290297	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAAAATTCAAGCGTG	NA	False	NA	NA	False	AATATA	-12	NA	165288043	165216087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.17	chr1	-	8038	1	Antisense	novelGene_ENSMUSG00000089299.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCTACCAAATGAAATT	NA	False	NA	NA	False	NA	NA	NA	165270690	165262652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_165262700_165270700
ES.1785.2	chr1	-	3360	20	NIC	ENSMUSG00000026571.13	novel	4110	19	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	12.1173852348907	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAATTTGACTTTTTA	NA	False	NA	-5	True	ATTAAA	-21	NA	165288034	165157076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165195014_165195075_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.3	chr1	-	2734	14	NNC	ENSMUSG00000026571.13	novel	4110	19	NA	NA	-16170	-8	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_13	12.3547178541008	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATATCCTAAATTTGACT	4485	False	NA	-10	True	ATTAAA	-16	NA	165232500	165157081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165232135
ES.1785.4	chr1	-	4804	18	NIC	ENSMUSG00000026571.13	novel	4110	19	NA	NA	-2	-51	intron_retention	FALSE	canonical	3	37	junction_1	4.57766504902205	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTTGTTGCTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	165288046	165157124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.5	chr1	-	3641	12	NIC	ENSMUSG00000026571.13	novel	4110	19	NA	NA	-3402	-52	intron_retention	FALSE	canonical	2	6	junction_9	14.4502566536159	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCATGTTTGTTGCTTT	7860	False	NA	-6	True	AATAAA	-15	NA	165219732	165157125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165195014_165195075_165216226_165216485_165217982_165218103_165219707
ES.1785.7	chr1	-	4695	18	NIC	ENSMUSG00000026571.13	novel	4110	19	NA	NA	0	-158	intron_retention	FALSE	canonical	3	37	junction_1	4.57766504902205	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTGCAATACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	165288044	165157231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.8	chr1	-	3140	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	5	965	5	-158	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTGCAATACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	165288029	165157231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.1785.9	chr1	-	3004	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	0	1106	0	-299	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTGGGGATAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	165288034	165157372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ES.17850.1	chr19	-	177	1	Intergenic	novelGene_14813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5511	False	NA	NA	False	NA	NA	NA	41927786	41927609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41927600_41927800
ES.17851.1	chr19	-	4189	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	31	2387	4	732	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTCTGTCAGAACTG	NA	False	NA	NA	False	AAAAAG	-18	NA	41969565	41931911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.11	chr19	-	3399	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	1	4	junction_26	54.9816746035591	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGTGTACTGCCTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	41969577	41932638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.12	chr19	-	3677	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	5	intron_retention	FALSE	canonical	3	6	junction_18	52.3749856333644	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGTGTACTGCCTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	41969573	41932638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.14	chr19	-	4820	29	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	5	intron_retention	FALSE	non_canonical	0	0	junction_26	68.3447424937033	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGTGTACTGCCTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	41969574	41932638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952847_41954652_41954754_41958141_41958191_41969437
ES.17851.15	chr19	-	3543	32	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	65.7578093469853	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGTGTACTGCCTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	41969570	41932638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41962225_41962305_41969437
ES.17851.17	chr19	-	3652	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	5	intron_retention	FALSE	canonical	3	137	junction_14	29.8112971268487	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGTGTACTGCCTTAT	NA	False	NA	-3	True	AATAAA	-21	NA	41969571	41932638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.18	chr19	-	4547	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	3	4	intron_retention	FALSE	canonical	1	9	junction_8	65.3097258099784	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969566	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933804_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.19	chr19	-	3418	30	NIC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_29	52.4045363876748	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969574	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ES.17851.2	chr19	-	3966	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	500	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGCTTACACGGCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	41969577	41932143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.20	chr19	-	3107	29	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	91	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	53.2950370052199	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969462	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.21	chr19	-	3449	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.5099355677888	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969577	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935376_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.22	chr19	-	4755	29	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	4	intron_retention	FALSE	canonical	3	137	junction_13	29.952343099378	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969574	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.23	chr19	-	3331	10	NIC	ENSMUSG00000025159.9	novel	3780	27	NA	NA	531	4	intron_retention	FALSE	canonical	0	0	junction_5	82.1259195788191	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41939252	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41936335_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190
ES.17851.24	chr19	-	4441	30	NNC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_29	77.6446676302693	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969579	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ES.17851.26	chr19	-	9002	19	NNC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	-12	4	intron_retention	FALSE	non_canonical	0	0	junction_2	81.5560853752091	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	8467	False	NA	-4	True	AATAAA	-20	NA	41958192	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933276_41933767_41934063_41934171_41935991_41936087_41938277_41938419_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41944401_41944947_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141
ES.17851.27	chr19	-	4231	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	67.7159426493414	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969607	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934583_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951474_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.28	chr19	-	3700	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-5	4	intron_retention	FALSE	canonical	0	0	junction_6	66.9431267735697	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACGTGTACTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	41969561	41932639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934583_41934643_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.29	chr19	-	4641	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_18	78.4800011636067	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969569	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944059_41944261_41944423_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.30	chr19	-	4733	26	NNC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	-1688	3	intron_retention	FALSE	canonical	0	0	junction_22	71.9371503466741	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	9848	False	NA	-5	True	AATAAA	-19	NA	41954754	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951516_41951839_41951910_41952301_41952377_41952756_41952843_41954652
ES.17851.33	chr19	-	4888	4	NNC	ENSMUSG00000025159.9	novel	432	3	NA	NA	1511	3	intron_retention	FALSE	non_canonical	0	0	junction_3	126.378619851443	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41938272	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41935991_41936087
ES.17851.35	chr19	-	3562	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	3	intron_retention	FALSE	canonical	3	6	junction_19	51.9869186875453	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969578	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944423_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.37	chr19	-	4470	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	54.7117293944665	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969580	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.38	chr19	-	5949	27	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-5	3	intron_retention	FALSE	canonical	3	137	junction_11	30.094058663861	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969561	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41934063_41934171_41935543_41936128_41936186_41936654_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.39	chr19	-	4569	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	3	intron_retention	FALSE	canonical	3	95	junction_14	35.5658856707295	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969573	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.4	chr19	-	3803	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	346	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCATCTTGTTTTTAG	NA	False	NA	NA	False	AGTAAA	-26	NA	41969568	41932297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.41	chr19	-	3487	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	69.4724565725311	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969580	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943175_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946280_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.42	chr19	-	4104	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	3	intron_retention	FALSE	canonical	3	137	junction_15	30.2307416512526	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969570	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.43	chr19	-	5144	28	NNC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_10	82.7281730566072	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969574	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938518_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ES.17851.44	chr19	-	3525	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.2861889561245	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969554	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933276_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.45	chr19	-	3391	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	80.7067473792167	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969573	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944423_41944947_41945026_41945579_41945683_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.46	chr19	-	3475	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	50.2546404711932	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969607	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933804_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.47	chr19	-	3470	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_20	51.6834488873265	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969556	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944423_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.48	chr19	-	3942	23	NNC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	261	3	intron_retention	FALSE	canonical	3	6	junction_18	76.0500596334279	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41951285	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238
ES.17851.49	chr19	-	6666	28	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	3	intron_retention	FALSE	non_canonical	0	0	junction_5	53.7565257467096	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACGTGTACTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	41969577	41932640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935991_41936087_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.51	chr19	-	4039	18	NNC	ENSMUSG00000025159.9	novel	3780	27	NA	NA	-318	2	intron_retention	FALSE	canonical	0	0	junction_6	94.7923609554152	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCACGTGTACTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	41943924	41932641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41936335_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943656_41943857
ES.17851.52	chr19	-	4465	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	76.6397343999109	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCACGTGTACTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	41969573	41932641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41935543_41936128_41936186_41936654_41936751_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.53	chr19	-	4589	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	2	intron_retention	FALSE	canonical	3	6	junction_18	52.4715199349192	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCACGTGTACTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	41969574	41932641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.54	chr19	-	3546	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	2	intron_retention	FALSE	canonical	3	9	junction_8	51.3902788569863	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCACGTGTACTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	41969574	41932641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.55	chr19	-	3338	30	NNC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	67.3387447153088	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTCACGTGTACTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	41969561	41932641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41943948_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ES.17851.56	chr19	-	4820	28	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-1	1	intron_retention	FALSE	canonical	3	137	junction_12	29.8502894545641	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969572	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.57	chr19	-	4801	26	NIC	ENSMUSG00000025159.9	novel	3412	30	NA	NA	290	1	intron_retention	FALSE	canonical	3	95	junction_13	37.3770838883934	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41952776	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756
ES.17851.58	chr19	-	9219	23	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-6	1	intron_retention	FALSE	canonical	3	13	junction_19	59.0738611771752	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969562	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41938277_41938419_41938523_41939190_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951474_41951839_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.59	chr19	-	4756	29	NIC	ENSMUSG00000025159.9	novel	7875	29	NA	NA	1	1	intron_retention	FALSE	canonical	3	6	junction_17	80.6072615354528	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969574	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944423_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951474_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.6	chr19	-	3745	18	NIC	ENSMUSG00000025159.9	novel	3780	27	NA	NA	-340	335	intron_retention	FALSE	canonical	3	137	junction_14	35.0901952019073	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTCTCCACACTGCAT	NA	False	NA	NA	False	AGTAAA	-15	NA	41943946	41932308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857
ES.17851.63	chr19	-	3566	32	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.7923214280218	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969573	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41934360_41934430_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.64	chr19	-	5230	28	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-2	1	intron_retention	FALSE	canonical	3	95	junction_12	35.8192000073039	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969580	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41934063_41934171_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.65	chr19	-	3528	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	66.8249870100166	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCACGTGTACTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	41969568	41932642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933276_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938428_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.66	chr19	-	3628	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	52.5630361614633	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969569	41932643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933297_41933767_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.67	chr19	-	5166	8	NNC	ENSMUSG00000025159.9	novel	3780	27	NA	NA	240	0	intron_retention	FALSE	non_canonical	0	0	junction_5	91.7549976395658	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41939543	41932643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935991_41936087_41938277_41938419_41938523_41939190
ES.17851.68	chr19	-	4546	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	77.835140879727	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969575	41932643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939293_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944036_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951474_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.7	chr19	-	3533	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	-38	3112	-38	7	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGTACTGCCTTATTC	NA	False	NA	-1	True	AATAAA	-23	NA	41969634	41932636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.70	chr19	-	3305	30	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	55.6375436764563	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969578	41932643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.71	chr19	-	4597	30	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	1	0	intron_retention	FALSE	canonical	3	6	junction_19	66.6020178017719	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969574	41932643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944423_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.72	chr19	-	5332	28	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	1	junction_7	54.4646221113155	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACACTCACGTGTACTG	NA	False	NA	-9	True	AATAAA	-15	NA	41969607	41932644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41935543_41936128_41936186_41936654_41936751_41937893_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ES.17851.73	chr19	-	186	1	Intergenic	novelGene_14814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTCTAGTTCCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	41937480	41937294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_41937300_41937500
ES.17852.1	chr19	+	1816	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	-281	-6	-281	6	multi-exon	FALSE	canonical	3	94	junction_1	5.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACATGACTTCCTGTTTC	NA	False	NA	16	True	AATAAA	-22	NA	41969920	42023088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_41970448_42020327_42020556_42022027
ES.17852.2	chr19	+	1367	3	NNC	ENSMUSG00000025171.3	novel	1529	3	NA	NA	-250	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	51	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGCACATGACTTCC	NA	False	NA	10	True	AATAAA	-16	NA	41969951	42023082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41970036_42020327_42020556_42022027
ES.17852.4	chr19	+	1529	4	NNC	ENSMUSG00000025171.3	novel	1529	3	NA	NA	-109	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.1192341005478	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCTTGCCTAGCACAT	NA	False	NA	3	True	AATAAA	-9	NA	41970092	42023075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_41970311_41970412_41970448_42020327_42020556_42022027
ES.17852.5	chr19	+	174	1	Intergenic	novelGene_14815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	5049	False	NA	NA	False	NA	NA	NA	41986841	41987015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_41986800_41987000
ES.17852.6	chr19	+	180	1	Intergenic	novelGene_14816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	42003864	42004044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42003900_42004000
ES.17853.1	chr19	-	175	1	Intergenic	novelGene_14817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGTTTTCTACA	NA	False	NA	NA	False	NA	NA	NA	42013126	42012951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42013000_42013100
ES.17854.1	chr19	+	179	1	Intergenic	novelGene_14818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAAG	1514	False	NA	NA	False	NA	NA	NA	42037542	42037721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42037500_42037700
ES.17855.1	chr19	+	2954	7	NNC	ENSMUSG00000025176.15	novel	631	3	NA	NA	12300	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.89296944860009	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGTCACGGAATATACA	712	False	NA	NA	False	NA	NA	NA	42046589	42059416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42047978_42048173_42048456_42048605_42048734_42049366_42049502_42049741_42049839_42051630_42051765_42058626
ES.17856.1	chr19	-	177	1	Intergenic	novelGene_14819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATATTTCGGTTA	4914	False	NA	NA	False	NA	NA	NA	42048173	42047996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42048000_42048200
ES.17857.1	chr19	-	180	1	Intergenic	novelGene_14820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATATTTAAA	5394	False	NA	NA	False	NA	NA	NA	42054062	42053882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42053900_42054100
ES.17858.1	chr19	+	180	1	Intergenic	novelGene_14821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTGGTGAGAA	1576	False	NA	NA	False	NA	NA	NA	42070288	42070468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42070300_42070500
ES.17859.1	chr19	+	266	1	Intergenic	novelGene_14822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAACAGTTCCCCCCTC	4600	False	NA	NA	False	NA	NA	NA	42073312	42073578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42073300_42073600
ES.17859.3	chr19	+	157	1	Intergenic	novelGene_14823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4601	False	NA	NA	False	NA	NA	NA	42073313	42073470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42073300_42073500
ES.1786.1	chr1	+	927	6	NNC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	177.884232016219	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTTTACATTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	165288146	165308688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165288450_165288911_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ES.1786.2	chr1	+	887	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	141	-3	-46	3	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCACTTCATCTTTCA	NA	False	NA	110	True	AATAAA	-19	NA	165288746	165308786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ES.1786.3	chr1	+	3993	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	-24	0	intron_retention	FALSE	canonical	3	408	junction_3	33.3299998333167	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTTTACATTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	165288768	165308688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_165289081_165302522_165305875_165307035_165307148_165308471
ES.1786.4	chr1	+	711	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	1	10	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGCCTCAAGGGGAC	NA	False	NA	22	True	AATAAA	-27	NA	165288793	165308698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
ES.1786.5	chr1	+	739	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	188	98	1	-3	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTCTGTCTTTACATTT	NA	False	NA	9	True	AATAAA	-14	NA	165288793	165308685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ES.17860.1	chr19	-	1804	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	-3	-1	-3	1	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTTATGAACTTTC	4137	False	NA	-2	True	AATAAA	-22	NA	42074799	42063379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ES.17860.2	chr19	-	1918	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTTATGAACTTTC	4138	False	NA	-2	True	AATAAA	-22	NA	42074798	42063379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
ES.17860.3	chr19	-	1989	5	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_4	27.9318366743041	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTGTTATGAACT	4142	False	NA	-5	True	AATAAA	-19	NA	42074794	42063382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067216_42074635
ES.17860.5	chr19	-	1896	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATTTGTGTTATGAA	4138	False	NA	-7	True	AATAAA	-17	NA	42074798	42063384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
ES.17860.6	chr19	-	4998	4	FSM	ENSMUSG00000049670.10	ENSMUST00000237567.2	2192	4	-2813	7	-2813	-4	multi-exon	FALSE	canonical	2	78	junction_2	13.7679176187089	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATTTGTGTTATGAA	8551	False	NA	-7	True	AATAAA	-17	NA	42070385	42063384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922
ES.17861.1	chr19	+	4981	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	-1251	-126	-1250	126	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATAGTGTTTGCCCTG	8946	False	NA	NA	False	GATAAA	-28	NA	42077658	42110652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.10	chr19	+	3219	5	NIC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	-29	3	intron_retention	FALSE	canonical	0	0	junction_4	201.954666942856	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTCTGTCCAGTTTC	NA	False	NA	16	True	TTTAAA	-34	NA	42078879	42110467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42108231
ES.17861.13	chr19	+	2014	10	FSM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	-19	-56	-19	0	multi-exon	FALSE	canonical	3	49	junction_9	126.842081267405	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACACATTTCTGTGG	NA	False	NA	75	True	GATAAA	-14	NA	42078889	42110526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
ES.17861.14	chr19	+	3671	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-19	3	intron_retention	FALSE	canonical	1	1	junction_5	184.236629915088	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTCTGTCCAGTTTC	NA	False	NA	16	True	TTTAAA	-34	NA	42078889	42110467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42102348_42102455_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.15	chr19	+	1942	10	NNC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	177.686990707442	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42078891	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104329_42104458_42104945_42105006_42108231_42108424_42110033
ES.17861.17	chr19	+	4476	8	FSM	ENSMUSG00000025178.10	ENSMUST00000235988.2	4267	8	-30	-179	-6	117	multi-exon	FALSE	canonical	3	416	junction_7	29.3445402215868	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATATTTACTATAGTG	NA	False	NA	NA	False	GATAAA	-19	NA	42078902	42110643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231
ES.17861.18	chr19	+	2574	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	141.926776460762	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078904	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108809_42109786
ES.17861.19	chr19	+	4424	9	NNC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_4	196.60938431316	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTCTGTCCAGTTTCC	NA	False	NA	17	True	TTTAAA	-35	NA	42078904	42110468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42096844_42096970_42101481_42101544_42103475_42104458_42104945_42105006_42108231
ES.17861.2	chr19	+	4719	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-1246	11	intron_retention	FALSE	canonical	1	1	junction_1	141.618248806648	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGGAGTTATGGGGA	8950	False	NA	86	True	GATAAA	-25	NA	42077662	42110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42078156_42078298_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.20	chr19	+	5268	9	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	0	4	intron_retention	TRUE	non_canonical	0	0	junction_5	149.549270727075	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCAGTTTCCTTTGGG	NA	False	NA	23	True	TTTAAA	-41	NA	42078909	42110474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42102963_42103178_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.21	chr19	+	2404	10	NNC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	141.001269585388	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTGACCTCTCTGTC	NA	False	NA	9	True	TTTAAA	-27	NA	42078910	42110460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42109556
ES.17861.22	chr19	+	2548	10	NNC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	141.926776460762	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078910	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42109421
ES.17861.23	chr19	+	7520	7	NNC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	3	3	intron_retention	FALSE	canonical	0	0	junction_2	164.761443709787	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTCTGTCCAGTTTC	NA	False	NA	16	True	TTTAAA	-34	NA	42078912	42110467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089281_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945
ES.17861.24	chr19	+	3484	8	NIC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_7	158.208593899552	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078912	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42108231
ES.17861.25	chr19	+	4312	8	NNC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_7	160.213250745017	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42078914	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108202
ES.17861.26	chr19	+	3610	10	NNC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_4	185.011978257532	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078915	42110470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42098768_42098837_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.29	chr19	+	3871	8	NIC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-9	3	intron_retention	FALSE	canonical	3	416	junction_7	29.2225800310902	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTCTGTCCAGTTTC	NA	False	NA	16	True	TTTAAA	-34	NA	42078923	42110467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42079376_42089075_42089277_42093296_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.3	chr19	+	4045	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-76	-2	intron_retention	FALSE	canonical	0	0	junction_5	184.445113787273	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42078832	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42102026_42102455_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.31	chr19	+	3515	9	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	144.461067419565	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42078930	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089269_42093292_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.32	chr19	+	3095	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	181.140692880655	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGACCTCTCTGTCCAG	NA	False	NA	12	True	TTTAAA	-30	NA	42078930	42110463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089281_42093300_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108903_42109327
ES.17861.33	chr19	+	1579	7	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	23	5661	-1	-2176	5prime_fragment	FALSE	canonical	3	421	junction_3	30.2048561217122	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGGGGGGGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	42078931	42104809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323
ES.17861.34	chr19	+	4049	7	ISM	ENSMUSG00000025178.10	ENSMUST00000235988.2	4267	8	-1	3445	-1	34	5prime_fragment	FALSE	canonical	3	421	junction_3	28.7155590809814	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTGGAAGAGAAACTT	NA	False	NA	NA	False	NA	NA	NA	42078931	42107019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945
ES.17861.35	chr19	+	3301	8	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-1	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.748801223135	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTGGAAGAGAAACTT	NA	False	NA	NA	False	NA	NA	NA	42078931	42107019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089281_42093300_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945
ES.17861.36	chr19	+	3288	9	NNC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	150.172348902852	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGACCTCTCTGTCCAG	NA	False	NA	12	True	TTTAAA	-30	NA	42078931	42110463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231_42108806_42109784
ES.17861.38	chr19	+	2766	10	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	141.926776460762	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078932	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42109030_42109787
ES.17861.4	chr19	+	4361	8	FSM	ENSMUSG00000025178.10	ENSMUST00000235988.2	4267	8	-87	-7	-63	1	multi-exon	FALSE	canonical	3	416	junction_7	29.3445402215868	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGTCCAGTTTCCTTT	NA	False	NA	20	True	TTTAAA	-38	NA	42078845	42110471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231
ES.17861.40	chr19	+	3224	6	NIC	ENSMUSG00000025178.10	novel	4267	8	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_5	183.394220192459	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078938	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42108231
ES.17861.41	chr19	+	4035	8	NNC	ENSMUSG00000025178.10	novel	3381	2	NA	NA	2422	114	intron_retention	FALSE	canonical	3	5	junction_1	156.70028587031	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATGAATATTTACTATA	NA	False	NA	NA	False	GATAAA	-16	NA	42081354	42110640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42081390_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231
ES.17861.42	chr19	+	170	1	Intergenic	novelGene_14824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTAAGTGAGTGGGAT	NA	False	NA	NA	False	NA	NA	NA	42083458	42083628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42083500_42083600
ES.17861.43	chr19	+	1465	9	ISM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	10166	8	10142	-2	3prime_fragment	FALSE	canonical	3	49	junction_8	132.920029999244	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42089074	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
ES.17861.44	chr19	+	4180	4	Intergenic	novelGene_14825	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTGAAAAAACCAAAAAAAA	4852	False	NA	NA	False	NA	NA	NA	42096402	42101268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42098038_42098240_42100191_42100581_42100870_42100961
ES.17861.45	chr19	+	5042	2	NNC	ENSMUSG00000025178.10	novel	3381	2	NA	NA	-1366	23	intron_retention	FALSE	non_canonical	0	0	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAAAAGAACAGTGG	NA	False	NA	NA	False	NA	NA	NA	42101750	42107008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42102963_42103178
ES.17861.5	chr19	+	3977	11	NNC	ENSMUSG00000025178.10	novel	3604	9	NA	NA	-61	-2	intron_retention	FALSE	canonical	0	0	junction_1	203.992548883532	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACCTCTCTGTCCA	NA	False	NA	11	True	TTTAAA	-29	NA	42078847	42110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42081203_42081390_42081986_42082176_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ES.17861.6	chr19	+	2745	9	NIC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	-59	-1	intron_retention	FALSE	canonical	3	49	junction_8	134.272809980279	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTGTCCAGTTTCCT	NA	False	NA	18	True	TTTAAA	-36	NA	42078849	42110469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231_42108424_42110033
ES.17861.9	chr19	+	3363	10	NNC	ENSMUSG00000025178.10	novel	1939	10	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	141.926776460762	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTGACCTCTCTGTCC	NA	False	NA	10	True	TTTAAA	-28	NA	42078879	42110461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42109828_42110033
ES.17862.1	chr19	-	5228	1	Antisense	novelGene_ENSMUSG00000025178.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGAAACTGACTTTTCT	NA	False	NA	NA	False	AAGAAA	-13	NA	42111197	42105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_42106000_42111200
ES.17862.2	chr19	-	2113	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	1	-1070	1	1070	multi-exon	FALSE	canonical	3	851	junction_1	12	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGTATGTGTTTTA	NA	False	NA	NA	False	AGTAAA	-11	NA	42117497	42110641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42112288_42113186_42113466_42117309
ES.17862.3	chr19	-	1041	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	1	2	1	-2	multi-exon	FALSE	canonical	3	851	junction_1	12	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCAGAGTGTGCT	NA	False	NA	-7	True	AATAAA	-13	NA	42117497	42111713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42112288_42113186_42113466_42117309
ES.17862.4	chr19	-	951	3	NNC	ENSMUSG00000018821.4	novel	1044	3	NA	NA	-1182	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	425.5	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTCAGAGTGTGCT	NA	False	NA	-7	True	AATAAA	-13	NA	42118680	42111713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42112288_42113186_42113466_42118582
ES.17862.5	chr19	-	4757	2	ISM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	1	130	1	-130	intron_retention	FALSE	canonical	3	851	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTCACCATCTCT	NA	False	NA	0	True	AATAAA	-18	NA	42117497	42111841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_42112288_42113186
ES.17862.6	chr19	-	1096	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	-185	133	-185	-133	multi-exon	FALSE	canonical	3	851	junction_1	12	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGTGTCTCACCATC	NA	False	NA	-3	True	AATAAA	-15	NA	42117683	42111844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42112288_42113186_42113466_42117309
ES.17863.1	chr19	-	186	1	Intergenic	novelGene_14826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCATAGCCTTTCT	9778	False	NA	NA	False	NA	NA	NA	42126212	42126026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42126000_42126200
ES.17864.1	chr19	-	183	1	Intergenic	novelGene_14827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATGTATAAAAAAAAA	5561	False	NA	NA	False	NA	NA	NA	42130429	42130246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42130200_42130400
ES.17865.1	chr19	+	121	1	Intergenic	novelGene_14828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42132787	42132908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42132800_42132900
ES.17866.1	chr19	+	3125	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	-57	-2	-57	2	multi-exon	FALSE	canonical	3	88	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCTCACGGCCTGGT	NA	False	NA	31	True	AATAAA	-23	NA	42135781	42140144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42137999_42139236
ES.17866.2	chr19	+	4358	1	FSM	ENSMUSG00000044345.10	ENSMUST00000184186.2	3755	1	-362	-241	-54	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCTCACGGCCTG	NA	False	NA	29	True	AATAAA	-21	NA	42135784	42140142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42135800_42140100
ES.17867.1	chr19	+	260	1	Intergenic	novelGene_14829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTTGGGAGG	NA	False	NA	NA	False	AAAAAG	-35	NA	42145670	42145930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42145700_42145900
ES.17868.1	chr19	+	197	1	Intergenic	novelGene_14830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	3526	False	NA	NA	False	NA	NA	NA	42150994	42151191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42151000_42151200
ES.17869.1	chr19	+	2561	12	NNC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-29	14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	47.5365018513612	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGCTGTTCAGGT	NA	False	NA	21	True	AATAAA	-28	NA	42158976	42180170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159026_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.10	chr19	+	5536	12	NNC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_3	65.6548702189798	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTTTGTCAGGTCTC	NA	False	NA	5	True	AATAAA	-12	NA	42159028	42180154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159108_42159984_42160183_42165827_42165899_42166009_42167356_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.11	chr19	+	3200	12	NNC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	-4	626	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	51.9179263297386	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42159028	42180782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174246_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.12	chr19	+	4238	13	NNC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.2879039565033	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTTTGTCAGGTCTC	NA	False	NA	5	True	AATAAA	-12	NA	42159030	42180154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159225_42159984_42160183_42165827_42165899_42166009_42167558_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.13	chr19	+	4516	11	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	125	junction_1	17.4974283824795	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTTTGTCAGGTCTC	NA	False	NA	5	True	AATAAA	-12	NA	42159033	42180154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.15	chr19	+	6124	10	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	17	7	intron_retention	FALSE	canonical	3	125	junction_1	17.5435964892544	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGTCTCCTAGTGCTG	NA	False	NA	14	True	AATAAA	-21	NA	42159049	42180163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.16	chr19	+	4396	12	NNC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	19	7	intron_retention	FALSE	canonical	0	0	junction_3	47.3647705325731	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGTCTCCTAGTGCTG	NA	False	NA	14	True	AATAAA	-21	NA	42159051	42180163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159225_42159984_42160183_42165827_42165899_42166009_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.17	chr19	+	4177	13	NNC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	32	-595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.3581318528787	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATCAGTTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	42159064	42182434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821_42180047_42180805
ES.17869.18	chr19	+	6101	4	FSM	ENSMUSG00000018820.14	ENSMUST00000164460.8	876	4	-1142	-4083	708	7	multi-exon	FALSE	canonical	3	143	junction_3	2.49443825784929	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGTTTCATAAATT	2014	False	NA	NA	False	ATTAAA	-18	NA	42172631	42183036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.19	chr19	+	1981	2	NNC	ENSMUSG00000018820.14	novel	818	5	NA	NA	5147	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCAGTTTCATAAATTT	2000	False	NA	NA	False	ATTAAA	-19	NA	42179194	42183037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42181002_42182863
ES.17869.2	chr19	+	4219	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	1	5	intron_retention	FALSE	canonical	3	55	junction_1	34.8007183833897	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGGTCTCCTAGTGC	NA	False	NA	12	True	AATAAA	-19	NA	42159006	42180161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.20	chr19	+	4300	1	Genic_Genomic	ENSMUSG00000018820.14	novel	NA	NA	NA	NA	5258	576	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTGGAAGCAAGTAAGC	2111	False	NA	NA	False	NA	NA	NA	42179305	42183605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_42179300_42183600
ES.17869.3	chr19	+	4329	11	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	11	8	intron_retention	FALSE	canonical	3	125	junction_1	17.592327873252	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGTCTCCTAGTGCTGT	NA	False	NA	15	True	AATAAA	-22	NA	42159016	42180164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.4	chr19	+	2658	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	49.8982965641113	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159017	42180156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177960_42178043_42178821
ES.17869.5	chr19	+	2714	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-8	16	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGTGCTGTTCAGGTCT	NA	False	NA	23	True	AATAAA	-30	NA	42159024	42180172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.6	chr19	+	2623	1	NIC	ENSMUSG00000018820.14	novel	636	3	NA	NA	-8	2	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	42159024	42161647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159000_42161600
ES.17869.7	chr19	+	5576	12	NIC	ENSMUSG00000018820.14	novel	5611	13	NA	NA	-5	8	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCAGTTTCATAAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	42159027	42183037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.8	chr19	+	4121	10	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	-4	0	intron_retention	FALSE	canonical	1	7	junction_2	54.2998078799775	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159028	42180156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42159108_42159984_42160183_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
ES.17869.9	chr19	+	2577	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	-4	0	-4	0	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159028	42180156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ES.1787.1	chr1	+	2626	1	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATACAAGAACGGGAACA	NA	False	NA	NA	False	NA	NA	NA	165354217	165356843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165354200_165356800
ES.17870.1	chr19	-	1566	1	Antisense	novelGene_ENSMUSG00000018820.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAATCATTCTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	42182345	42180779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_42180800_42182300
ES.17871.1	chr19	+	174	1	Intergenic	novelGene_14831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAACAGCCGAA	NA	False	NA	NA	False	NA	NA	NA	42220847	42221021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42220800_42221000
ES.17872.1	chr19	+	343	1	Intergenic	novelGene_14833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAATCTTAAA	8563	False	NA	NA	False	NA	NA	NA	42277253	42277596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42277300_42277600
ES.17872.2	chr19	+	179	1	Intergenic	novelGene_14832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGAACAAGCAGGGACTG	8563	False	NA	NA	False	NA	NA	NA	42277253	42277432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42277300_42277400
ES.17873.1	chr19	+	168	1	Intergenic	novelGene_14834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42285419	42285587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42285400_42285600
ES.17874.1	chr19	+	206	1	Intergenic	novelGene_14836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCACAAACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42390431	42390637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42390400_42390600
ES.17875.1	chr19	-	5837	8	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-33991	3	intron_retention	FALSE	canonical	0	0	junction_2	21.2122413637378	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCAGCCTCTTTTCTG	NA	False	NA	4	True	GATAAA	-30	NA	42310384	42271470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42276438_42286092_42286262_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42310341
ES.17875.11	chr19	-	4384	9	NIC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-30927	4	intron_retention	FALSE	canonical	3	28	junction_7	17.9652442232217	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGGAAAACTATATCT	NA	False	NA	-13	True	AATAAA	-21	NA	42307320	42271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42293255_42297495_42297631_42307043
ES.17875.12	chr19	-	2177	15	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	20.0529910232761	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACAACCTTTGTGGAAA	NA	False	NA	-22	True	AATAAA	-12	NA	42420223	42271975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272120_42272561_42272706_42275611_42275715_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ES.17875.13	chr19	-	6245	6	NIC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-30927	-5	intron_retention	FALSE	canonical	3	28	junction_4	20.0957706993288	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACAACCTTTGTGGAAA	NA	False	NA	-22	True	AATAAA	-12	NA	42307320	42271975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42272706_42275611_42276438_42286092_42287679_42290563_42293255_42297495_42297631_42307043
ES.17875.14	chr19	-	1426	12	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-33978	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	21.7149070935762	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTAACAACCT	NA	False	NA	-31	True	AATAAA	-3	NA	42310371	42271984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42310341
ES.17875.18	chr19	-	3291	12	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-30979	-14	intron_retention	TRUE	canonical	0	0	junction_7	28.3274827860108	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTAACAACCT	NA	False	NA	-31	True	AATAAA	-3	NA	42307372	42271984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42290791_42291940_42292133_42292267_42293108_42293255_42297495_42297631_42307043
ES.17875.19	chr19	-	1458	12	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-30756	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.5995867735244	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTAACAACCT	NA	False	NA	-31	True	AATAAA	-3	NA	42307149	42271984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42291404_42291518_42293108_42293255_42297495_42297631_42307043
ES.17875.20	chr19	-	3674	11	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-30879	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.6530351167344	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGGAAAAAAAAATCT	NA	False	NA	-39	True	TTTAAA	-8	NA	42307272	42271992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42291940_42292133_42293255_42297495_42297631_42307043
ES.17875.21	chr19	-	4306	1	NIC	ENSMUSG00000042401.9	novel	2164	15	NA	NA	-30970	-31087	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTGCGTTCAGGAGTT	NA	False	NA	NA	False	NA	NA	NA	42307363	42303057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42303100_42307400
ES.17875.22	chr19	-	2544	3	NNC	ENSMUSG00000042401.9	novel	2164	15	NA	NA	1	-87707	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAGTGGGAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	42420223	42359677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42361844_42402379_42402583_42420048
ES.17875.23	chr19	-	328	1	Intergenic	novelGene_14835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAAAGTGTGGG	NA	False	NA	-14	True	AATAAA	-25	NA	42367368	42367040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42367000_42367400
ES.17875.4	chr19	-	1700	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19157	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTTCCAGCCTCTTT	2534	False	NA	0	True	GATAAA	-26	NA	42295550	42271474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
ES.17875.5	chr19	-	2615	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	-2	5	0	-5	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAAGTCTTCCAGCCT	NA	False	NA	-4	True	GATAAA	-22	NA	42420224	42271478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ES.17875.6	chr19	-	2332	15	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	211	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6280704731833	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTAAGTCTTCCAGC	NA	False	NA	-6	True	GATAAA	-20	NA	42420011	42271480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42271741_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42419737
ES.17875.7	chr19	-	3024	14	ISM	ENSMUSG00000042401.9	ENSMUST00000238290.2	2164	15	31	14755	29	-7	5prime_fragment	FALSE	canonical	3	19	junction_13	19.444656709652	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTAAGTCTTCCAGC	NA	False	NA	-6	True	GATAAA	-20	NA	42420193	42271480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ES.17875.8	chr19	-	2406	15	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	21.1944351571976	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTAAGTCTTCCAGC	NA	False	NA	-6	True	GATAAA	-20	NA	42420223	42271480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42271914_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ES.17876.1	chr19	+	3139	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	2	971	2	362	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGGTGTTTATAAATCT	NA	False	NA	NA	False	ATTAAA	-22	NA	42507199	42579811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17876.10	chr19	+	4130	7	NNC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	21	2	intron_retention	FALSE	canonical	1	1	junction_1	33.0050501186308	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGTTACCTTATTA	NA	False	NA	NA	False	NA	NA	NA	42507281	42580784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42507397_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17876.11	chr19	+	3106	7	NNC	ENSMUSG00000025184.11	novel	3129	2	NA	NA	282	357	intron_retention	FALSE	canonical	0	0	junction_1	33.3687312048604	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTATGGTGTTTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	42507542	42579806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42507612_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17876.2	chr19	+	3022	6	NIC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	4	357	intron_retention	FALSE	canonical	1	1	junction_3	37.0696641473861	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTATGGTGTTTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	42507240	42579806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42507297_42550990_42552781_42564464_42564641_42571263_42571360_42571841_42571983_42579043
ES.17876.3	chr19	+	3399	5	NIC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	4	357	intron_retention	FALSE	canonical	0	0	junction_2	40.1084467413038	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTATGGTGTTTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	42507240	42579806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_42507297_42550990_42552781_42570358_42570430_42571263_42571983_42579043
ES.17876.4	chr19	+	1298	6	FSM	ENSMUSG00000025184.11	ENSMUST00000160107.2	950	6	7	-355	7	355	multi-exon	FALSE	canonical	1	2	junction_1	35.4942248823664	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCATTATGGTGTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	42507243	42579804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42507297_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17876.5	chr19	+	4072	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	46	-6	7	6	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTACCTTATTAATTT	NA	False	NA	NA	False	NA	NA	NA	42507243	42580788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17876.6	chr19	+	3033	6	NNC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	8	360	intron_retention	FALSE	non_canonical	0	0	junction_3	37.4646500050381	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	42507244	42579809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42507297_42550990_42552781_42564464_42564641_42571251_42571360_42571841_42571983_42579043
ES.17876.7	chr19	+	3159	8	NNC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	-5	360	intron_retention	FALSE	non_canonical	0	0	junction_6	40.6111475597828	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	42507255	42579809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42572086_42572163_42579041
ES.17876.9	chr19	+	3168	7	NNC	ENSMUSG00000025184.11	novel	4112	7	NA	NA	0	352	intron_retention	FALSE	canonical	1	1	junction_1	33.0050501186308	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAATCATTATGGTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	42507260	42579801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42507397_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ES.17877.1	chr19	-	5490	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	-43	-1709	-43	1709	multi-exon	TRUE	canonical	1	2	junction_12	2.28124563181019	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTTGGTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	42601295	42580711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
ES.17877.2	chr19	-	5452	16	NNC	ENSMUSG00000025185.15	novel	2617	15	NA	NA	-2679	1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.24139887497152	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTACTGGAGTCCTTGGT	8842	False	NA	NA	False	NA	NA	NA	42603931	42580720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592758_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42602625_42602670_42603868
ES.17877.3	chr19	-	5572	16	NNC	ENSMUSG00000025185.15	novel	3738	15	NA	NA	1	1671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.05213950460256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAACATAAAAA	NA	False	NA	NA	False	NA	NA	NA	42601210	42580749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42598962_42599168_42601156
ES.17877.4	chr19	-	1231	1	Genic_Genomic	ENSMUSG00000025185.15	novel	NA	NA	NA	NA	9204	1095	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGACTTTAAAAAACT	NA	False	NA	NA	False	AGTAAA	-25	NA	42582556	42581325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_42581300_42582600
ES.17877.6	chr19	-	3744	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	17	-23	17	23	multi-exon	FALSE	canonical	1	2	junction_12	2.28124563181019	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGATTTTACAGCATT	NA	False	NA	NA	False	AATAAA	-20	NA	42601235	42582397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
ES.17877.7	chr19	-	5396	15	NIC	ENSMUSG00000025185.15	novel	3738	15	NA	NA	-375	323	intron_retention	FALSE	canonical	0	0	junction_14	2.85803557482037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTCAGGCCTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	42601627	42583221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42599072
ES.17878.1	chr19	-	5510	1	Intergenic	novelGene_14837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTCTATGTATTCTAT	NA	False	NA	NA	False	NA	NA	NA	42686987	42681477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42681500_42687000
ES.17879.1	chr19	-	4893	15	NNC	ENSMUSG00000060224.5	novel	3137	16	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	4.07080195679286	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCGGTCCAGCCTTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	42740944	42714296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42715426_42716095_42716217_42718060_42718168_42719757_42719913_42722159_42722317_42722521_42722595_42723861_42723997_42724334_42726626_42726709_42726772_42728773_42728928_42730946_42731103_42735785_42735860_42735935_42736026_42737822_42737843_42740775
ES.17879.2	chr19	-	2955	8	NNC	ENSMUSG00000060224.5	novel	3137	16	NA	NA	15198	1	intron_retention	FALSE	canonical	0	0	junction_5	4.58034844053754	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGTATTGTTTTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	42725713	42715081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42715429_42716095_42716217_42718060_42718168_42719757_42719913_42720636_42720780_42722159_42722317_42722521_42722595_42723861
ES.17879.3	chr19	-	1217	8	ISM	ENSMUSG00000060224.5	ENSMUST00000235183.2	2093	16	16452	2	16452	-2	3prime_fragment	FALSE	canonical	2	3	junction_2	3.73619909446343	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGCTTGTATTGTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	42724459	42715084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_42715429_42716095_42716217_42718060_42718168_42719757_42719913_42722159_42722317_42722521_42722595_42723861_42723997_42724334
ES.1788.1	chr1	+	155	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	165406219	165406374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165406200_165406400
ES.17880.1	chr19	+	2609	18	Genic_Genomic	ENSMUSG00000090235.2	novel	2327	2	NA	NA	-21766	-304	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTCCGGGTAGGACACG	NA	False	NA	NA	False	NA	NA	NA	42745704	42768396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_42746344_42748140_42748286_42748802_42748868_42748947_42749083_42749449_42749515_42750536_42750715_42750831_42751002_42752235_42752277_42754342_42754419_42754561_42754656_42755124_42755273_42755556_42755717_42758043_42758153_42759191_42759342_42759558_42759694_42766560_42766727_42766996_42767086_42768352
ES.17880.2	chr19	+	2441	3	NNC	ENSMUSG00000090235.2	novel	2327	2	NA	NA	-931	128	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	42766539	42770021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42766727_42767671_42767783_42767878
ES.17880.3	chr19	+	2790	3	NNC	ENSMUSG00000090235.2	novel	2327	2	NA	NA	-898	25275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAGGAAAATATAAAGAAAC	NA	False	NA	NA	False	AATAAA	-27	NA	42766572	42795168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42766727_42767671_42767783_42792643
ES.17880.4	chr19	+	2757	3	NNC	ENSMUSG00000090235.2	novel	2327	2	NA	NA	-895	25260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAACCAGG	NA	False	NA	NA	False	AATAAA	-12	NA	42766575	42795153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_42766712_42767671_42767783_42792643
ES.17880.5	chr19	+	1403	1	ISM	ENSMUSG00000090235.2	ENSMUST00000159313.2	2327	2	1019	1	941	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCTTTTATTATTATTA	NA	False	NA	NA	False	AATAAA	-18	NA	42768489	42769892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_42768500_42769900
ES.17880.6	chr19	+	227	1	Intergenic	novelGene_14838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTTATAAAATTATT	NA	False	NA	NA	False	NA	NA	NA	42780019	42780246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_42780000_42780200
ES.17881.1	chr19	-	2986	20	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	3	-15	combination_of_known_junctions	FALSE	canonical	3	15	junction_19	27.100714999103	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTATGTGTGTATGT	NA	False	NA	73	True	NA	NA	NA	42768395	42743558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ES.17881.10	chr19	-	3229	19	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	31.0384568313107	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768402	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748286_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.11	chr19	-	3544	19	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	9	-1	intron_retention	FALSE	canonical	1	3	junction_9	30.1137760198358	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768389	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754047_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.13	chr19	-	2707	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	28.4245611869446	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768382	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744709_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.17	chr19	-	2648	19	NIC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	30.9621433526113	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768397	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.19	chr19	-	2919	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	30.55361755515	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768380	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755355_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.2	chr19	-	2814	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	15	18	2	-18	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCATGTATGTGTGTA	NA	False	NA	70	True	NA	NA	NA	42768402	42743561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.22	chr19	-	3494	18	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	18	0	intron_retention	FALSE	canonical	3	80	junction_17	17.5491401025549	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAAGCCTGTCCCTGGC	NA	False	NA	-5	True	AATAAA	-17	NA	42768380	42743636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.23	chr19	-	3402	19	NIC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	15	junction_18	27.5315755873322	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCAAGCCTGTCCCTGG	NA	False	NA	-6	True	AATAAA	-16	NA	42768397	42743637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ES.17881.24	chr19	-	3151	19	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_12	31.0537169004506	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCAAGCCTGTCCCTGG	NA	False	NA	-6	True	AATAAA	-16	NA	42768380	42743637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42755215_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.3	chr19	-	2855	20	NIC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	-8	-24	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	28.8133740876661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATATCATGTATG	NA	False	NA	64	True	NA	NA	NA	42768425	42743567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.4	chr19	-	2801	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	5	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.5371124282743	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAATATCATGTAT	NA	False	NA	63	True	NA	NA	NA	42768393	42743568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748298_42748807_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.5	chr19	-	2829	19	NNC	ENSMUSG00000025188.16	novel	2952	20	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.7927568846214	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTCCCTGGCCTTTC	NA	False	NA	0	True	AATAAA	-22	NA	42768395	42743631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748298_42748807_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ES.17881.7	chr19	-	3233	19	NIC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	16	-1	intron_retention	FALSE	canonical	3	80	junction_18	17.2912594775796	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768382	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ES.17881.9	chr19	-	2903	20	NNC	ENSMUSG00000025188.16	novel	2847	20	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9910730698631	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGCCTGTCCCTGGCC	NA	False	NA	-4	True	AATAAA	-18	NA	42768352	42743635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_42744236_42744659_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ES.17882.1	chr19	-	6205	1	NIC	ENSMUSG00000074852.5	novel	4231	12	NA	NA	430946	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAAGTTCTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	42781182	42774977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_42775000_42781200
ES.17883.1	chr19	-	2919	1	Intergenic	novelGene_14839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	42880169	42877250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_42877200_42880200
ES.17884.1	chr19	-	175	1	Intergenic	novelGene_14840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	43133634	43133459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43133500_43133600
ES.17885.1	chr19	-	3310	1	Intergenic	novelGene_14841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAGAGTTCAGAAAAC	NA	False	NA	NA	False	AATAAA	-12	NA	43234071	43230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43230800_43234100
ES.17886.1	chr19	+	3926	2	ISM	ENSMUSG00000025189.10	ENSMUST00000223787.2	2931	12	-25	27602	-25	-10137	5prime_fragment	FALSE	canonical	2	6	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTTCCTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	43428849	43455878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_43430457_43453559
ES.17886.10	chr19	+	1538	6	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	578	707	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.92574776766556	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	43460690	43484187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43460864_43473308_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
ES.17886.2	chr19	+	2520	1	Genic_Genomic	ENSMUSG00000025189.10	novel	NA	NA	NA	NA	-23	-34644	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGACCTCTTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	43428851	43431371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_43428900_43431400
ES.17886.3	chr19	+	5088	11	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.72021504754766	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGCTGCTTTGCTTGCCC	NA	False	NA	NA	False	AATAAA	-43	NA	43428852	43485648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473283_43473448_43479859_43480044_43480202_43480353_43482118_43482251_43483397
ES.17886.4	chr19	+	5058	11	FSM	ENSMUSG00000025189.10	ENSMUST00000165311.3	5037	11	-22	1	-22	-1	multi-exon	FALSE	canonical	2	3	junction_6	3.04795013082563	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGCTGCTTTGCTTGCCC	NA	False	NA	NA	False	AATAAA	-43	NA	43428852	43485648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473283_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
ES.17886.5	chr19	+	5021	11	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	-22	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.9446165846632	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAATAATTTTTAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	43428852	43485606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473308_43473448_43479859_43480044_43480202_43480353_43482118_43482251_43483397
ES.17886.6	chr19	+	4494	11	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	516	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	3.36005952328229	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGCTGCTTTGCTTGCC	NA	False	NA	NA	False	AATAAA	-42	NA	43429390	43485647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473308_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
ES.17886.7	chr19	+	1132	1	NIC	ENSMUSG00000025189.10	novel	2931	12	NA	NA	517	-35492	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGGCTTCAGGTACCC	NA	False	NA	NA	False	GATAAA	-17	NA	43429391	43430523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_43429400_43430500
ES.17886.8	chr19	+	5470	11	NNC	ENSMUSG00000025189.10	novel	5037	11	NA	NA	526	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.9293765408777	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGCTGCTTTGCTTGCC	NA	False	NA	NA	False	AATAAA	-42	NA	43429400	43485647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43430457_43453559_43454690_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473308_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
ES.17886.9	chr19	+	3547	1	Intergenic	novelGene_14842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTGAAAGAACAATAGCA	NA	False	NA	NA	False	NA	NA	NA	43438673	43442220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43438700_43442200
ES.17887.1	chr19	-	158	1	Intergenic	novelGene_14843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43448074	43447916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43447900_43448100
ES.17888.1	chr19	-	2019	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	42	-3	42	3	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGATCCATTCATGA	8359	False	NA	0	True	NA	NA	NA	43513002	43488187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.10	chr19	-	3996	8	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	55	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	406.292947494383	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAATGGAGTTTGTGA	8372	False	NA	-11	True	NA	NA	NA	43512989	43488198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43490795_43490987_43491485_43492960_43493127_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.11	chr19	-	1796	8	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-48	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	292.070651223505	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAATGGAGTTTGTGA	8389	False	NA	-11	True	NA	NA	NA	43512972	43488198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43512776
ES.17888.12	chr19	-	1772	8	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	59	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	297.055756464977	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAATGGAGTTTGTGA	8376	False	NA	-11	True	NA	NA	NA	43512985	43488198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43488997_43491346_43491490_43492960_43493059_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.13	chr19	-	9352	6	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	2844	-8	intron_retention	TRUE	non_canonical	0	0	junction_5	330.90095194786	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAATGGAGTTTGTGA	8752	False	NA	-11	True	NA	NA	NA	43501460	43488198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43500375_43500435
ES.17888.15	chr19	-	1946	9	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-46	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	282.899247745553	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAAATGGAGTTTGT	8391	False	NA	-13	True	NA	NA	NA	43512970	43488200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495788_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.17	chr19	-	1868	1	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	2764	-144	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACCTTGCCTTCCTCTC	9816	False	NA	0	True	AATAAA	-23	NA	43490471	43488603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43488600_43490500
ES.17888.18	chr19	-	1584	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	52	422	52	141	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGATGTAATCACCTTGC	8369	False	NA	-9	True	AATAAA	-14	NA	43512992	43488612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.19	chr19	-	730	3	FSM	ENSMUSG00000025190.14	ENSMUST00000124954.2	720	3	-10	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	416.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGAGAGTATTTTGCT	8427	False	NA	NA	False	AATGAA	-22	NA	43512934	43500692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43501083_43504119_43504302_43512776
ES.17888.2	chr19	-	3470	8	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	59	0	intron_retention	FALSE	canonical	3	761	junction_4	50.3068137552368	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8376	False	NA	-3	True	NA	NA	NA	43512985	43488190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43488997_43491346_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.3	chr19	-	2254	8	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	770	junction_5	43.7030797962051	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTGTGATCCAT	8413	False	NA	-6	True	NA	NA	NA	43512948	43488193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.5	chr19	-	2090	10	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	349.321387977841	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTGTGATCCAT	8413	False	NA	-6	True	NA	NA	NA	43512948	43488193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43509109_43509241_43512776
ES.17888.8	chr19	-	1940	9	NNC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	56	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	278.407974023734	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGGAGTTTGTGATCC	8373	False	NA	-8	True	NA	NA	NA	43512988	43488195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43488997_43491346_43491433_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17888.9	chr19	-	3984	8	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	-59	-8	intron_retention	FALSE	canonical	3	761	junction_4	52.6916327633269	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAATGGAGTTTGTGA	8378	False	NA	-11	True	NA	NA	NA	43512983	43488198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ES.17889.1	chr19	-	203	1	Intergenic	novelGene_14844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGCATGAGGGAGATG	NA	False	NA	NA	False	AAGAAA	-5	NA	43566957	43566754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43566800_43567000
ES.1789.1	chr1	+	1379	2	Antisense	novelGene_ENSMUSG00000026566.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	165420071	165429522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165421246_165429317
ES.17890.1	chr19	-	177	1	Intergenic	novelGene_14845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43622565	43622388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43622400_43622600
ES.17891.1	chr19	-	3318	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	-21	-1762	-21	1762	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCGGTTGTAATCTGG	NA	False	NA	NA	False	NA	NA	NA	43663341	43650477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
ES.17891.10	chr19	-	2742	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-14	1	intron_retention	FALSE	canonical	1	1	junction_2	137.650120070981	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663334	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43653083_43654210_43655583_43662442_43662553_43662914
ES.17891.11	chr19	-	1468	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	136.7097493069	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663293	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43653083_43654210_43654268_43655390_43655583_43662914
ES.17891.12	chr19	-	1447	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	137.652541648246	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGCTGTGTTGGGTTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	43663295	43652243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43653083_43654210_43654268_43655412_43655583_43662914
ES.17891.13	chr19	-	2396	2	NIC	ENSMUSG00000040414.9	novel	3724	2	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGCTGTGTTGGGTTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	43663286	43652243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43654268_43662914
ES.17891.14	chr19	-	1634	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	135.766957197496	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGCTGTGTTGGGTTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	43663317	43652243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43653083_43654210_43654268_43655247_43655583_43662914
ES.17891.2	chr19	-	2669	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-48	0	intron_retention	FALSE	canonical	3	293	junction_1	1	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663368	43652239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43653083_43654210_43655583_43662914
ES.17891.3	chr19	-	5683	1	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-2340	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43657922	43652239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43652200_43657900
ES.17891.4	chr19	-	3775	2	FSM	ENSMUSG00000040414.9	ENSMUST00000235953.2	3724	2	-50	-1	-29	1	multi-exon	FALSE	canonical	3	295	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663349	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43655583_43662914
ES.17891.5	chr19	-	1562	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	-30	3	-30	1	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663350	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
ES.17891.6	chr19	-	2675	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-15	1	intron_retention	FALSE	canonical	3	130	junction_1	82.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663335	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43654268_43655353_43655583_43662914
ES.17891.7	chr19	-	612	2	NNC	ENSMUSG00000040414.9	novel	3724	2	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663298	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43652831_43663274
ES.17891.8	chr19	-	2753	3	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-8	1	intron_retention	FALSE	canonical	2	6	junction_1	144.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663307	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43654268_43655247_43655583_43662914
ES.17891.9	chr19	-	1825	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	128.224629286091	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTGGGTTTGT	NA	False	NA	-6	True	ATTAAA	-16	NA	43663342	43652242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43653083_43654210_43654268_43655082_43655583_43662914
ES.17892.1	chr19	+	1092	1	FSM	ENSMUSG00000117698.2	ENSMUST00000236819.2	1999	1	-23	930	-23	-930	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCCCAGTCACACACAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	43663593	43664685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43663600_43664700
ES.17893.1	chr19	+	4887	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	11	1013	11	-1013	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGAGTTTCTGTTTG	2650	False	NA	NA	False	TATAAA	-25	NA	43678121	43721123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
ES.17893.2	chr19	+	3022	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	138	2751	1	-2751	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTGTTTGTTT	2777	False	NA	NA	False	AATAAA	-25	NA	43678248	43719385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
ES.17893.3	chr19	+	1991	9	FSM	ENSMUSG00000025192.14	ENSMUST00000144314.2	1829	9	-17	-145	14	145	multi-exon	FALSE	canonical	2	6	junction_1	3.11247489949718	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGCCATGTCATCA	2790	False	NA	NA	False	AATAAA	-42	NA	43678261	43711158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187
ES.17894.1	chr19	-	209	1	Intergenic	novelGene_14846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAAACTTGAGGATTAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	43701763	43701554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43701600_43701800
ES.17895.1	chr19	-	160	1	Intergenic	novelGene_14847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8065	False	NA	NA	False	NA	NA	NA	43709573	43709413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43709400_43709600
ES.17896.1	chr19	+	2125	1	Antisense	novelGene_ENSMUSG00000040018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAAACTTACAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	43726879	43729004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_43726900_43729000
ES.17897.1	chr19	+	1543	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	-309	-1	-207	1	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTCAGGTTCTTTCA	8965	False	NA	17	True	AATAAA	-20	NA	43741227	43757078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
ES.17897.2	chr19	+	3368	8	NIC	ENSMUSG00000025193.15	novel	1233	9	NA	NA	7	1	intron_retention	FALSE	canonical	3	18	junction_1	5.54020555133295	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTATAGTCTCAGGT	9281	False	NA	10	True	AATAAA	-13	NA	43741543	43757071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43751446_43753398_43753427_43755639_43755746_43756613
ES.17897.3	chr19	+	181	1	Intergenic	novelGene_14848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAGTTATACAT	NA	False	NA	NA	False	NA	NA	NA	43742903	43743084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43742900_43743100
ES.17897.4	chr19	+	4880	5	NNC	ENSMUSG00000025193.15	novel	1233	9	NA	NA	-4925	4137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.015617378047	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGTGAAGAAGAAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	43748386	43761214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43748499_43749127_43749164_43753398_43753427_43755642_43755746_43756613
ES.17898.1	chr19	-	4340	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	62	396	62	-396	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGCTGGTGTGTGGTT	NA	False	NA	NA	False	TATAAA	-39	NA	43741377	43722088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.10	chr19	-	4550	11	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	62	-1867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	192.067410041371	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAGTCAGCTAACCCA	NA	False	NA	-15	True	AATAAA	-17	NA	43741377	43723559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43725843_43725926_43726475_43726590_43726744_43728431_43728577_43728646_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.13	chr19	-	2992	10	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1868	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	153.945236374722	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741419	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43725843_43725926_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.14	chr19	-	2218	5	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.197099548074	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741419	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725249_43735304_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.15	chr19	-	1802	2	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	62	-1868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741377	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725246_43741260
ES.17898.16	chr19	-	3080	9	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1868	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	135.33332691913	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741419	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741090
ES.17898.17	chr19	-	3137	10	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	34	-1868	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	150.775362299492	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741405	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43725684_43725926_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.18	chr19	-	4388	7	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	41	-1868	intron_retention	FALSE	canonical	3	8	junction_4	151.345814463287	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741398	43723560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43725292_43726475_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
ES.17898.19	chr19	-	2743	8	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.517057817995	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTCAGTCAGCTAAC	NA	False	NA	-18	True	AATAAA	-14	NA	43741419	43723562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730376_43732055_43732224_43737228_43737352_43739782_43739974_43741260
ES.17898.2	chr19	-	3380	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	35	1383	35	-1383	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTTAAGAATTCCACA	NA	False	NA	NA	False	NA	NA	NA	43741404	43723075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.20	chr19	-	2885	9	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	19	-1873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	134.21199415477	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTTTCAGTCAGCT	NA	False	NA	-21	True	AATAAA	-11	NA	43741420	43723565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732184_43735155_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.21	chr19	-	2872	9	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.385639113709	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGTCCACAATTCTGT	NA	False	NA	-26	True	ATTAAA	-23	NA	43741419	43723620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730376_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.22	chr19	-	2405	7	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	33	-1929	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	152.911739248496	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGTCCACAATTCTG	NA	False	NA	-27	True	ATTAAA	-22	NA	43741406	43723621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732099_43739778_43739974_43741260
ES.17898.23	chr19	-	2044	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	7	2747	7	2036	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGAGGTTGCACATTT	NA	False	NA	NA	False	AATATA	-18	NA	43741432	43724439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.24	chr19	-	1755	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	37	3006	37	1777	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTTTGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	43741402	43724698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.3	chr19	-	2973	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	-20	1845	-20	-1845	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTGGGATTGATT	NA	False	NA	7	True	AATAAA	-39	NA	43741459	43723537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.4	chr19	-	5889	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	5	-1855	intron_retention	FALSE	canonical	3	354	junction_3	38.4187454245971	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCCAGGATTTTTGTTT	NA	False	NA	-3	True	AATAAA	-29	NA	43741434	43723547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.5	chr19	-	7064	5	ISM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	4415	1855	4415	-1855	intron_retention	FALSE	canonical	3	354	junction_3	46.1789995560753	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCCAGGATTTTTGTTT	3513	False	NA	-3	True	AATAAA	-29	NA	43737024	43723547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055
ES.17898.6	chr19	-	2683	8	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.20956529449	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACCCAGGATTTTTGT	NA	False	NA	-5	True	AATAAA	-27	NA	43741419	43723549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737323_43741278
ES.17898.7	chr19	-	2733	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	20	-1858	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	140.673743253019	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTAACCCAGGATTTTTG	NA	False	NA	-6	True	AATAAA	-26	NA	43741419	43723550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
ES.17898.8	chr19	-	2870	9	NNC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	40	-1860	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	134.983274426871	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCTAACCCAGGATTTT	NA	False	NA	-8	True	AATAAA	-24	NA	43741399	43723552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43725292_43726475_43726562_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17898.9	chr19	-	4607	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	10	-1867	intron_retention	FALSE	canonical	3	354	junction_2	37.8547169034023	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAGTCAGCTAACCCA	NA	False	NA	-15	True	AATAAA	-17	NA	43741429	43723559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43725292_43726475_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ES.17899.1	chr19	-	138	1	Intergenic	novelGene_14849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	5427	False	NA	NA	False	NA	NA	NA	43747535	43747397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43747400_43747500
ES.179.1	chr1	+	248	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGCTCTCATATATCC	NA	False	NA	NA	False	AAAACA	-41	NA	22446157	22446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_22446200_22446400
ES.1790.1	chr1	-	2376	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	-34	-57	-25	57	multi-exon	TRUE	canonical	3	372	junction_2	205.630737002035	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTGCAGCTGCACAAG	NA	False	NA	56	True	GATAAA	-14	NA	165462132	165419751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.10	chr1	-	3041	4	NIC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	2	-2	intron_retention	FALSE	canonical	3	343	junction_1	212.057120187515	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462096	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165421247_165432178_165433392_165436006_165436174_165461871
ES.1790.11	chr1	-	2237	6	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	-666	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	298.016778051169	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462773	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165462592
ES.1790.12	chr1	-	2259	6	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	391.550967308216	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462089	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165422114_165422206_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.13	chr1	-	1831	3	FSM	ENSMUSG00000026566.16	ENSMUST00000194437.6	643	3	-17	-1171	-1	-2	multi-exon	FALSE	canonical	3	25	junction_1	400.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462099	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165421247_165436006_165436174_165461871
ES.1790.14	chr1	-	180	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGAGAGAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	165439503	165439323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165439300_165439500
ES.1790.15	chr1	-	7116	1	NIC	ENSMUSG00000026566.16	novel	761	5	NA	NA	4823	-13710	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3700	False	NA	NA	False	NA	NA	NA	165456832	165449716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165449700_165456800
ES.1790.16	chr1	-	2262	1	NIC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	2	-23828	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTTTCAGTGGAGATT	NA	False	NA	NA	False	NA	NA	NA	165462096	165459834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165459800_165462100
ES.1790.17	chr1	-	1524	2	Genic_Genomic	ENSMUSG00000026566.16	novel	2171	5	NA	NA	-4	-23832	multi-exon	FALSE	non_canonical	0	0	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAACATTTTCAGTGGA	NA	False	NA	NA	False	NA	NA	NA	165462094	165459838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_165461142_165461873
ES.1790.2	chr1	-	5037	5	NIC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	404	junction_1	175.811511284102	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462096	165419808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165421247_165429318_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.3	chr1	-	2220	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	-51	2	-34	-2	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462141	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.4	chr1	-	12229	5	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	-20	-2	intron_retention	TRUE	canonical	0	0	junction_1	349.229419579737	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462127	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165427386_165428294_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.5	chr1	-	2309	6	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	296.646321399744	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462089	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165429318_165429425_165432178_165432347_165433177_165433392_165436006_165436174_165461871
ES.1790.6	chr1	-	3910	6	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	322.269204237699	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462089	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165429318_165429425_165430542_165432312_165433177_165433392_165436006_165436174_165461871
ES.1790.7	chr1	-	2033	5	NNC	ENSMUSG00000026566.16	novel	853	5	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	334.166500415586	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462099	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165462016
ES.1790.8	chr1	-	2114	5	NNC	ENSMUSG00000026566.16	novel	2171	5	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	334.166500415586	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462037	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436168_165461867
ES.1790.9	chr1	-	2309	6	NNC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	322.269204237699	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	False	NA	-3	True	AATACA	-17	NA	165462088	165419810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165421247_165429318_165429461_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ES.17900.1	chr19	+	4598	29	ISM	ENSMUSG00000025194.6	ENSMUST00000026208.6	8027	32	15777	2979	-17	-2967	3prime_fragment	FALSE	canonical	0	0	junction_2	0.859372101108284	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGTACCTTAGAAAATC	3361	False	NA	NA	False	AATACA	-40	NA	43786407	43826200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_43786635_43786845_43786954_43787528_43787585_43788975_43789208_43792081_43792246_43793374_43793553_43795448_43795704_43797088_43797155_43798909_43799048_43799554_43799702_43800869_43800955_43801628_43801696_43803126_43803254_43805235_43805413_43806452_43806621_43807793_43807975_43810057_43810185_43810445_43810582_43811413_43811634_43811776_43811932_43814273_43814430_43815022_43815223_43816319_43816447_43818250_43818353_43818849_43818994_43820483_43820643_43822303_43822471_43825022_43825218_43825866
ES.17900.2	chr19	+	7531	29	ISM	ENSMUSG00000025194.6	ENSMUST00000026208.6	8027	32	15818	5	24	-5	3prime_fragment	FALSE	canonical	0	0	junction_2	0.859372101108284	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAATTCCGTTGTGTTG	3402	False	NA	NA	False	AATAAA	-19	NA	43786448	43829174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_43786635_43786845_43786954_43787528_43787585_43788975_43789208_43792081_43792246_43793374_43793553_43795448_43795704_43797088_43797155_43798909_43799048_43799554_43799702_43800869_43800955_43801628_43801696_43803126_43803254_43805235_43805413_43806452_43806621_43807793_43807975_43810057_43810185_43810445_43810582_43811413_43811634_43811776_43811932_43814273_43814430_43815022_43815223_43816319_43816447_43818250_43818353_43818849_43818994_43820483_43820643_43822303_43822471_43825022_43825218_43825866
ES.17900.3	chr19	+	1842	12	ISM	ENSMUSG00000025194.6	ENSMUST00000026208.6	8027	32	15825	27317	31	22	internal_fragment	FALSE	canonical	0	0	junction_2	0.616575453011388	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGACTCTGTCTTCTAT	3409	False	NA	NA	False	AGTAAA	-16	NA	43786455	43801862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_43786635_43786845_43786954_43787528_43787585_43788975_43789208_43792081_43792246_43793374_43793553_43795448_43795704_43797088_43797155_43798909_43799048_43799554_43799702_43800869_43800955_43801628
ES.17900.4	chr19	+	1733	12	NNC	ENSMUSG00000025194.6	novel	8027	32	NA	NA	47	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.642824346533225	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGACTCTGTCTTCTAT	3425	False	NA	NA	False	AGTAAA	-16	NA	43786471	43801862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_43786635_43786845_43786954_43787528_43787585_43788975_43789208_43792081_43792246_43793374_43793553_43795448_43795704_43797088_43797155_43798909_43799048_43799554_43799702_43800869_43800955_43801721
ES.17900.5	chr19	+	7634	24	NIC	ENSMUSG00000025194.6	novel	8027	32	NA	NA	5566	-4	intron_retention	FALSE	canonical	0	0	junction_3	0.914078088766463	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAATTCCGTTGTGTTGT	3578	False	NA	NA	False	AATAAA	-20	NA	43791990	43829175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_43792246_43793374_43793553_43795448_43795704_43797088_43797155_43798909_43799048_43799554_43799702_43800869_43800955_43801628_43801696_43803126_43803254_43805235_43805413_43806452_43806621_43807793_43807975_43810057_43810185_43810445_43810582_43811413_43811634_43811776_43811932_43814273_43815223_43816319_43816447_43818250_43818353_43818849_43818994_43820483_43820643_43822303_43822471_43825022_43825218_43825866
ES.17901.1	chr19	+	5013	2	Antisense	novelGene_ENSMUSG00000025195.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43832878	43839388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_43836720_43838216
ES.17902.1	chr19	+	178	1	Intergenic	novelGene_14850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	43879901	43880079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43879900_43880100
ES.17903.1	chr19	+	175	1	Intergenic	novelGene_14851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	43883763	43883938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43883800_43883900
ES.17904.1	chr19	+	856	1	Intergenic	novelGene_14853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43918517	43919373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43918500_43919400
ES.17905.1	chr19	-	5466	1	Genic_Genomic	ENSMUSG00000025195.10	novel	NA	NA	NA	NA	31614	4132	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	43836593	43831127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_43831100_43836600
ES.17905.10	chr19	-	5182	12	NNC	ENSMUSG00000025195.10	novel	4186	14	NA	NA	423	1	intron_retention	FALSE	non_canonical	0	0	junction_8	21.9642835545828	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	1080	False	NA	-4	True	AATAAA	-16	NA	43878707	43835258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43877748
ES.17905.11	chr19	-	3931	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	-59	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.885431338024	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGTGTTTCCTTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	43868266	43835258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863437_43868051
ES.17905.13	chr19	-	4472	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	624	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.3786601082265	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGAGTGTGTTTCCTTC	1281	False	NA	-6	True	AATAAA	-14	NA	43878506	43835260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863437_43877748
ES.17905.14	chr19	-	5035	13	NNC	ENSMUSG00000025195.10	novel	4186	14	NA	NA	87	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.190930974253	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGAGTGTGTTTCCT	744	False	NA	-8	True	AATAAA	-12	NA	43879043	43835262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858585_43858749_43862596_43862697_43863265_43863460_43877748
ES.17905.15	chr19	-	5208	10	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	7692	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.3218356615859	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGAGTGTGTTTCCT	NA	False	NA	-8	True	AATAAA	-12	NA	43860515	43835262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600
ES.17905.16	chr19	-	6037	11	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	48	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	23.1622537763491	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGAGTGTGTTTCCT	NA	False	NA	-8	True	AATAAA	-12	NA	43868159	43835262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ES.17905.17	chr19	-	4154	12	NNC	ENSMUSG00000025195.10	novel	4186	14	NA	NA	350	-967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.0910961458598	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTGGGGTTTTTT	1007	False	NA	NA	False	NA	NA	NA	43878780	43837372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43877748
ES.17905.18	chr19	-	663	5	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	-10	-20993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3765459026175	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAGAGAATAATGCGTT	NA	False	NA	NA	False	NA	NA	NA	43868217	43857398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ES.17905.19	chr19	-	186	1	Intergenic	novelGene_14852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGAGTATAGTTTGG	NA	False	NA	NA	False	NA	NA	NA	43895667	43895481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43895500_43895700
ES.17905.2	chr19	-	5039	13	NNC	ENSMUSG00000025195.10	novel	4186	14	NA	NA	87	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	21.190930974253	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTCCTTCATCTTGA	744	False	NA	1	True	AATAAA	-21	NA	43879043	43835253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43877748
ES.17905.20	chr19	-	2568	1	Genic_Genomic	ENSMUSG00000025195.10	novel	NA	NA	NA	NA	-48	-12660	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	43928678	43926110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_43926100_43928700
ES.17905.3	chr19	-	3974	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	-75	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	21.3574082905415	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTTCCTTCATCTTG	NA	False	NA	0	True	AATAAA	-20	NA	43868282	43835254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ES.17905.4	chr19	-	4121	15	NNC	ENSMUSG00000025195.10	novel	6100	16	NA	NA	-25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.4444932734548	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTTCCTTCATCTTG	NA	False	NA	0	True	AATAAA	-20	NA	43928655	43835254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43899163_43899287_43900673_43900829_43928555
ES.17905.5	chr19	-	3901	14	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	82	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	27.6289874361252	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTTTCCTTCATCT	NA	False	NA	-2	True	AATAAA	-18	NA	43868125	43835256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43867201_43867288_43868051
ES.17905.6	chr19	-	3914	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	4717	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.637626235731	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTTTCCTTCATCT	NA	False	NA	-2	True	AATAAA	-18	NA	43863490	43835256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855536_43855679_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265
ES.17905.7	chr19	-	3909	14	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	51	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	28.3807585455587	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTTTCCTTCATCT	NA	False	NA	-2	True	AATAAA	-18	NA	43868156	43835256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863437_43867201_43867288_43868051
ES.17905.8	chr19	-	6153	16	NNC	ENSMUSG00000025195.10	novel	6100	16	NA	NA	-71	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.2313737680338	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTGTTTCCTTCATC	NA	False	NA	-3	True	AATAAA	-17	NA	43928701	43835257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857454_43858600_43858749_43862596_43862697_43863265_43863460_43889508_43891498_43899163_43899287_43900673_43900829_43928555
ES.17905.9	chr19	-	3849	13	NNC	ENSMUSG00000025195.10	novel	3901	14	NA	NA	47	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	21.3574082905415	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTGTTTCCTTCATC	NA	False	NA	-3	True	AATAAA	-17	NA	43868160	43835257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858590_43858749_43862596_43862697_43863265_43863460_43868051
ES.17906.1	chr19	+	175	1	Intergenic	novelGene_14854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTGG	NA	False	NA	NA	False	NA	NA	NA	43932302	43932477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43932300_43932500
ES.17907.1	chr19	-	177	1	Intergenic	novelGene_14855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43940452	43940275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43940300_43940500
ES.17908.1	chr19	-	349	1	Intergenic	novelGene_14856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGAGGAGGTGTAGAT	NA	False	NA	NA	False	NA	NA	NA	43941492	43941143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_43941100_43941500
ES.17909.1	chr19	-	3042	2	ISM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	23856	3	5993	-3	3prime_fragment	FALSE	canonical	3	54	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTGCCACTTGCATG	NA	False	NA	0	True	ATTAAA	-19	NA	43951139	43944748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_43945076_43948424
ES.17909.2	chr19	-	1662	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	161	5	161	-5	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGGTGCCACTTGCA	6023	False	NA	-2	True	ATTAAA	-17	NA	43974834	43944750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
ES.17909.3	chr19	-	3293	1	NIC	ENSMUSG00000025196.5	novel	1828	9	NA	NA	6644	-2450	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	43950488	43947195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_43947200_43950500
ES.1791.1	chr1	+	310	2	Antisense	novelGene_ENSMUSG00000040723.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTTGACTCTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	165482830	165483656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165483025_165483540
ES.1791.2	chr1	+	819	1	Antisense	novelGene_ENSMUSG00000040723.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTGACTCTAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	165482838	165483657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165482800_165483700
ES.17910.1	chr19	+	177	1	Intergenic	novelGene_14857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAATCTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43996755	43996932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_43996800_43996900
ES.17911.1	chr19	+	198	1	Intergenic	novelGene_14858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGCTAGTGACCCGGCA	NA	False	NA	NA	False	NA	NA	NA	44009552	44009750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44009600_44009800
ES.17912.1	chr19	-	1786	9	FSM	ENSMUSG00000025197.10	ENSMUST00000026211.10	1916	9	123	7	123	-7	multi-exon	TRUE	canonical	0	0	junction_3	4.84606799374503	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATAGTTTCTTTGTATG	4254	False	NA	NA	False	AATAAA	-11	NA	44017515	43993467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_43994062_43995462_43995605_44000721_44000910_44002014_44002157_44003342_44003520_44004104_44004266_44005174_44005325_44010000_44010164_44017446
ES.17913.1	chr19	+	6928	1	Antisense	novelGene_ENSMUSG00000025198.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAAAGCCAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	44030714	44037642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_44030700_44037600
ES.17914.1	chr19	+	5529	1	Antisense	novelGene_ENSMUSG00000025199.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	44066194	44071723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_44066200_44071700
ES.17915.1	chr19	-	3531	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	-258	-101	1	101	multi-exon	TRUE	canonical	3	157	junction_6	17.066048165876	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGAGGGCCAGGGTGTT	NA	False	NA	99	True	NA	NA	NA	44058223	44023281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
ES.17915.11	chr19	-	3091	12	NNC	ENSMUSG00000025198.17	novel	3136	12	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	59.4573254840731	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGATTGTGTGTGTTC	NA	False	NA	-9	True	AATAAA	-12	NA	44058195	44023389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044626_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ES.17915.12	chr19	-	2766	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	31	339	2	-339	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATCTGGATCACTGAGC	NA	False	NA	NA	False	GATAAA	-15	NA	44058193	44023721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ES.17915.13	chr19	-	2181	1	Intergenic	novelGene_14859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAGAGAGAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	44040971	44038790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44038800_44041000
ES.17915.14	chr19	-	232	1	Intergenic	novelGene_14860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCTACTTCATTGTA	NA	False	NA	NA	False	AAAAAG	-36	NA	44041427	44041195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44041200_44041400
ES.17915.15	chr19	-	3860	2	FSM	ENSMUSG00000025198.17	ENSMUST00000170577.2	2083	2	-16	-1761	-4	1761	multi-exon	FALSE	canonical	3	207	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAAAAAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	44058199	44052749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44056121_44057710
ES.17915.16	chr19	-	3533	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	-30	-1	-30	1	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATCTCTACTCATTTT	NA	False	NA	0	True	ATTAAA	-16	NA	44095949	44061772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.18	chr19	-	3489	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	-7	-1	-4	0	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095923	44061773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.19	chr19	-	3320	20	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	73.5873799851224	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095862	44061773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.2	chr19	-	3236	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	-7	-1	3	1	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTATTTTCT	NA	False	NA	-1	True	AATAAA	-20	NA	44058221	44023381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
ES.17915.23	chr19	-	3632	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	72.0103291202033	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095605	44061773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095282
ES.17915.24	chr19	-	3350	21	NNC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.7467545618318	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTCTACTCATT	NA	False	NA	-2	True	ATTAAA	-14	NA	44095603	44061774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077219_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
ES.17915.25	chr19	-	3780	12	ISM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	15032	1	-7995	-1	3prime_fragment	FALSE	canonical	3	113	junction_2	58.211924029133	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44080884	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371
ES.17915.26	chr19	-	5165	20	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	39	-1	intron_retention	FALSE	canonical	3	276	junction_7	18.9857797784293	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44095869	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.27	chr19	-	3453	21	NNC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	78.1478726517875	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44095870	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085990_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.28	chr19	-	5563	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	38	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	71.9881934764306	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44095870	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44069206_44070053_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.3	chr19	-	3133	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	3	0	3	0	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058221	44023382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ES.17915.30	chr19	-	3381	20	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	38	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	72.2008970102579	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44095870	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44090175_44090291_44092096_44092192_44095726
ES.17915.31	chr19	-	3438	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_20	66.1814739938603	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATCTCTACTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	44095677	44061775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095546
ES.17915.32	chr19	-	3612	21	NNC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	116	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	78.3296080674479	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGAATCTCTACTCA	NA	False	NA	-4	True	ATTAAA	-12	NA	44095605	44061776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095282
ES.17915.33	chr19	-	3702	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	71.7923916581694	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGAATCTCTACTCA	NA	False	NA	-4	True	ATTAAA	-12	NA	44095891	44061776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067656_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.35	chr19	-	3420	21	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	70.1508374860914	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095872	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065791_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.38	chr19	-	3312	20	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	38	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	69.4422975352962	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095870	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44063970_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.39	chr19	-	5476	8	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	-4306	-6	intron_retention	FALSE	canonical	3	276	junction_5	18.0532093364847	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44077195	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44066880_44067327_44067425_44070384_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113
ES.17915.4	chr19	-	3064	12	NNC	ENSMUSG00000025198.17	novel	3136	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	55.7547759507857	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058235	44023382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058212
ES.17915.41	chr19	-	6188	18	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	38	-6	intron_retention	FALSE	canonical	3	276	junction_6	19.0388421037236	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095870	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.42	chr19	-	3963	5	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	-2016	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	121.162081527184	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	24	True	NA	-8	True	ATTAAA	-8	NA	44069737	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065791_44066731_44066880_44067327
ES.17915.44	chr19	-	6391	20	NIC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	36	-6	intron_retention	FALSE	canonical	3	113	junction_2	46.426482556279	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095872	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.46	chr19	-	2631	12	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	-6541	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	93.5014031803492	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44079430	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067718_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371
ES.17915.48	chr19	-	3719	22	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	38	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	90.4965891791576	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095870	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44076582_44076856_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.49	chr19	-	3255	20	NIC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	17	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	78.746797850739	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095891	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.50	chr19	-	3408	21	NNC	ENSMUSG00000025199.17	novel	3481	21	NA	NA	38	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	78.1515194989835	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	False	NA	-8	True	ATTAAA	-8	NA	44095870	44061780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095747
ES.17915.51	chr19	-	9040	18	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	31	-7	intron_retention	FALSE	canonical	3	276	junction_5	19.0595497319889	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTATTTTGAATCTCT	NA	False	NA	-9	True	ATTAAA	-7	NA	44095877	44061781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44062980_44063869_44066880_44067327_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.52	chr19	-	2952	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	143	386	-52	-386	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATTCCAAAGGGTCT	NA	False	NA	NA	False	TTTAAA	-20	NA	44095773	44062160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.53	chr19	-	2514	19	ISM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	25	3564	17	38	5prime_fragment	FALSE	canonical	3	276	junction_6	19.3387604132475	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTGCAAGTAAGAACTC	NA	False	NA	NA	False	ATTAAA	-19	NA	44095891	44065338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.54	chr19	-	2047	16	FSM	ENSMUSG00000025199.17	ENSMUST00000147423.8	2337	16	18	272	18	-272	multi-exon	FALSE	canonical	3	276	junction_3	19.8510005345379	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATTTAGCGTTGGATCA	NA	False	NA	NA	False	NA	NA	NA	44095890	44070125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17915.55	chr19	-	1403	4	NNC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	118	-3227	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	125.990299450218	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTGGCCTTGAACTCAT	NA	False	NA	NA	False	NA	NA	NA	44095603	44088862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44089749_44089925_44090291_44092096_44092192_44095546
ES.17915.6	chr19	-	3172	12	NNC	ENSMUSG00000025198.17	novel	3228	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	74.2495234701017	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058168	44023382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050288_44050344_44051457_44051505_44056038_44056121_44057710_44057832_44058027
ES.17915.7	chr19	-	7463	31	Fusion	ENSMUSG00000025199.17_ENSMUSG00000025198.17	novel	3502	21	NA	NA	27	-2	multi-exon	FALSE	canonical	0	0	junction_11	84.9095008425637	505	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTGTTCTATTT	NA	False	NA	-4	True	AATAAA	-17	NA	44095881	44023384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44060679_44062980_44063869_44063970_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ES.17916.1	chr19	+	4759	2	Antisense	novelGene_ENSMUSG00000025200.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAACCAGGCCCTAAT	2863	False	NA	NA	False	NA	NA	NA	44110417	44115264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_44112845_44112932
ES.17917.1	chr19	-	4583	15	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	19	964	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	55.7708504068392	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAATTAAAAAATATCT	NA	False	NA	NA	False	AATAAA	-25	NA	44124262	44096111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44099769_44099861_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.10	chr19	-	2743	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	53.2202079340581	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTAGAGCTTTTCCAC	NA	False	NA	-9	True	AATAAA	-14	NA	44124306	44097860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
ES.17917.11	chr19	-	4440	14	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_13	43.5413154813466	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGATGTCTTATGTTGCT	NA	False	NA	-3	True	AATAGA	-24	NA	44124074	44098459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44121720
ES.17917.12	chr19	-	2162	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	29	1390	-5	4	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACAGATGTCTTAT	NA	False	NA	-9	True	AATAGA	-18	NA	44124286	44098465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.13	chr19	-	1951	13	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	-4	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.7620250758261	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACAGATGTCTTAT	NA	False	NA	-9	True	AATAGA	-18	NA	44124285	44098465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.15	chr19	-	2882	13	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	6	2	intron_retention	FALSE	canonical	3	11	junction_8	42.6086845607794	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCTGACAGATGTCTT	NA	False	NA	-11	True	AATAGA	-16	NA	44124306	44098467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.16	chr19	-	2142	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGCTGACAGATGTCT	NA	False	NA	-12	True	AATAGA	-15	NA	44124285	44098468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
ES.17917.17	chr19	-	2561	14	NNC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	56.7443138980754	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGCTGACAGATGTCT	NA	False	NA	-12	True	AATAGA	-15	NA	44124098	44098468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44123586
ES.17917.18	chr19	-	4606	13	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-17	0	intron_retention	FALSE	canonical	3	11	junction_9	42.6213137865187	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124081	44098469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438
ES.17917.19	chr19	-	2101	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	55.1652707832719	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124296	44098469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115855_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
ES.17917.2	chr19	-	2904	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	0	677	0	102	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTGGCTCATAACTTAA	NA	False	NA	99	True	NA	NA	NA	44124315	44097752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.20	chr19	-	4239	14	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_13	64.6535601512916	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124101	44098469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44121894
ES.17917.21	chr19	-	4498	13	NNC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	44.5954033505697	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAAGGCTGACAGATG	NA	False	NA	-15	True	AATAGA	-12	NA	44124297	44098471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44110400_44111582_44112840_44112927_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.22	chr19	-	3162	14	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-38	-216	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	55.1897211937494	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGGTGGCTCATGTCGC	NA	False	NA	NA	False	TTTAAA	-13	NA	44124102	44098685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44122784
ES.17917.23	chr19	-	1804	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	29	1748	-5	-354	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGAGGCCTCTGATTGA	NA	False	NA	NA	False	AATATA	-20	NA	44124286	44098823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.24	chr19	-	247	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	3	-104	3	104	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTCATCAAGACTTCAA	4909	False	NA	-5	True	NA	NA	NA	44102560	44102313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44102300_44102600
ES.17917.3	chr19	-	2847	14	NNC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	2	87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	43.5211979908207	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTGGTTCCCCAGC	NA	False	NA	84	True	NA	NA	NA	44124279	44097767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120530_44120604_44121438_44121524_44124204
ES.17917.5	chr19	-	5055	14	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	-35	1	intron_retention	FALSE	canonical	1	1	junction_13	55.1897211937494	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTTTCCACCTGGCCT	NA	False	NA	-2	True	AATAAA	-21	NA	44124099	44097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44121720
ES.17917.6	chr19	-	2784	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	19	778	4	1	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTTTCCACCTGGCCT	NA	False	NA	-2	True	AATAAA	-21	NA	44124296	44097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.7	chr19	-	2841	15	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	69.4174006298427	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTTTCCACCTGGCCT	NA	False	NA	-2	True	AATAAA	-21	NA	44124306	44097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44099769_44099861_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
ES.17917.8	chr19	-	2751	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	40.9509737188349	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTTTTCCACCTGGCC	NA	False	NA	-3	True	AATAAA	-20	NA	44124292	44097854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ES.17917.9	chr19	-	4000	15	NIC	ENSMUSG00000025200.8	novel	4068	15	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	70.4114728592158	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAGCTTTTCCACCTGG	NA	False	NA	-5	True	AATAAA	-18	NA	44124042	44097856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117664_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44121894_44121992_44122784
ES.17918.1	chr19	-	1987	3	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	1210	junction_1	39.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	967	False	NA	NA	False	ATTAAA	-18	NA	44134881	44127684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44128153_44130562_44131580_44134379
ES.17918.10	chr19	-	3875	9	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35253	0	intron_retention	FALSE	canonical	3	43	junction_4	11.6189500386223	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	812	False	NA	-1	True	AATAAA	-17	NA	44145628	44136075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44144116_44144279_44144505_44145490
ES.17918.11	chr19	-	2774	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35323	0	intron_retention	FALSE	canonical	3	31	junction_8	12.458330546265	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	882	False	NA	-1	True	AATAAA	-17	NA	44145558	44136075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
ES.17918.13	chr19	-	3667	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35282	0	intron_retention	FALSE	canonical	3	43	junction_4	11.0263433156047	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	841	False	NA	-2	True	AATAAA	-16	NA	44145599	44136076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44144116_44144279_44144505_44145490
ES.17918.14	chr19	-	5557	7	NIC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35282	0	intron_retention	FALSE	canonical	3	43	junction_6	11.9640665698954	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	841	False	NA	-2	True	AATAAA	-16	NA	44145599	44136076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44140902_44142097_44144116_44144279_44144505_44145490
ES.17918.15	chr19	-	5438	6	NIC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35282	0	intron_retention	FALSE	canonical	0	0	junction_2	25.8565272223476	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	841	False	NA	-2	True	AATAAA	-16	NA	44145599	44136076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44138850_44140902_44142097_44144116_44144279_44144505_44145490
ES.17918.16	chr19	-	3604	17	NNC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	-7257	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.403001791127	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	4280	False	NA	-2	True	AATAAA	-16	NA	44188138	44136076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490_44145745_44146075_44146204_44179859_44179974_44180478_44180616_44183647_44183821_44187761
ES.17918.17	chr19	-	2949	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35323	-2	intron_retention	FALSE	canonical	3	31	junction_7	13.1242871646519	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTCTTTGCATTTCCTT	882	False	NA	-4	True	AATAAA	-14	NA	44145558	44136078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145490
ES.17918.18	chr19	-	3538	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35303	-2	intron_retention	FALSE	canonical	3	35	junction_7	12.4761500867717	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTCTTTGCATTTCCTT	862	False	NA	-4	True	AATAAA	-14	NA	44145578	44136078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44144116_44144279_44144505_44145490
ES.17918.19	chr19	-	3021	10	NIC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35282	-2	intron_retention	FALSE	canonical	3	31	junction_7	12.3508384280802	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTCTTTGCATTTCCTT	841	False	NA	-4	True	AATAAA	-14	NA	44145599	44136078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
ES.17918.2	chr19	-	4768	2	FSM	ENSMUSG00000057506.6	ENSMUST00000237613.2	563	2	-3845	-360	7	0	multi-exon	FALSE	canonical	3	1210	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	986	False	NA	NA	False	ATTAAA	-18	NA	44134862	44127684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44128153_44130562
ES.17918.21	chr19	-	4672	8	NNC	ENSMUSG00000037578.5	novel	3529	14	NA	NA	35312	-6	intron_retention	FALSE	canonical	1	1	junction_7	22.3314548910504	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACGTCTTTGCATTT	871	False	NA	-8	True	AATAAA	-10	NA	44145569	44136082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145486
ES.17918.22	chr19	-	3745	9	NNC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35327	-6	intron_retention	FALSE	canonical	0	0	junction_4	21.3420799126983	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACGTCTTTGCATTT	886	False	NA	-8	True	AATAAA	-10	NA	44145554	44136082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140520_44140594_44140802_44140902_44142097_44144116_44144279_44144505_44145490
ES.17918.24	chr19	-	2046	8	NNC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35315	-2258	intron_retention	FALSE	canonical	0	0	junction_1	23.4146299983404	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATCCTTGATGAT	874	False	NA	NA	False	NA	NA	NA	44145566	44138334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44138576_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145490
ES.17918.3	chr19	-	8321	10	Fusion	ENSMUSG00000037578.5_ENSMUSG00000057506.6	novel	3529	14	NA	NA	-11088	0	intron_retention	FALSE	canonical	3	43	junction_9	575.102309738595	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	467	False	NA	NA	False	ATTAAA	-18	NA	44145973	44127684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44136988_44137591_44137716_44137967_44138087_44138850_44140902_44142097_44144116_44144279_44144505_44145490
ES.17918.4	chr19	-	899	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	-14	0	-14	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAATGTGGGT	949	False	NA	NA	False	ATTAAA	-5	NA	44134899	44127697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
ES.17918.5	chr19	-	1662	4	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	5	-7	intron_retention	FALSE	canonical	3	1199	junction_3	40.0860186210715	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAACAAAACAAA	971	False	NA	NA	False	NA	NA	NA	44134877	44127704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44128153_44130562_44131580_44134379_44134497_44134797
ES.17918.6	chr19	-	3850	4	NNC	ENSMUSG00000057506.6	novel	885	5	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_1	587.577134416316	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAACAAAACAAA	979	False	NA	NA	False	NA	NA	NA	44134869	44127704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44129364_44129577_44131580_44134379_44134497_44134797
ES.17918.8	chr19	-	3142	4	NNC	ENSMUSG00000057506.6	novel	885	5	NA	NA	186	-7	intron_retention	FALSE	canonical	0	0	junction_1	614.83349146108	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAACAAAACAAA	1196	False	NA	NA	False	NA	NA	NA	44134652	44127704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44129364_44129577_44130668_44131459_44131580_44134379
ES.17918.9	chr19	-	1608	3	NIC	ENSMUSG00000057506.6	novel	683	5	NA	NA	-5	1	intron_retention	FALSE	canonical	3	1199	junction_2	45	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTAGTAAGTAGCAT	974	False	NA	NA	False	AATAAA	-18	NA	44134874	44130165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44131580_44134379_44134497_44134797
ES.17919.1	chr19	-	184	1	Intergenic	novelGene_14861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAGCTAGAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	44200109	44199925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44199900_44200100
ES.1792.2	chr1	-	2459	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51024	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGGTTCTTATTCTGA	NA	False	NA	0	True	AATAAA	-13	NA	165484593	165476513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165477780_165482873_165483606_165484132
ES.1792.4	chr1	-	2855	7	FSM	ENSMUSG00000040723.15	ENSMUST00000040357.11	2622	7	-233	0	-195	0	multi-exon	FALSE	canonical	0	0	junction_3	13.5851225815432	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGGTTCTTATTCT	NA	False	NA	-2	True	AATAAA	-11	NA	165535850	165476515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165477780_165482873_165483606_165485067_165485272_165486941_165487014_165491134_165491225_165492517_165492620_165535459
ES.1792.5	chr1	-	2347	2	ISM	ENSMUSG00000040723.15	ENSMUST00000040357.11	2622	7	51023	638	51023	-638	3prime_fragment	FALSE	canonical	3	37	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCCTGCTCCAAGGAC	NA	False	NA	NA	False	ATTAAA	-16	NA	165484594	165477153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165477780_165482873
ES.1792.6	chr1	-	1569	3	NNC	ENSMUSG00000040723.15	novel	5001	6	NA	NA	51024	-957	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCCACGAC	NA	False	NA	NA	False	AATATA	-16	NA	165484593	165477472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165477780_165482873_165483606_165484063
ES.17920.1	chr19	+	1709	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12295	1339	12295	659	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGATCAGACCCAGC	728	False	NA	NA	False	NA	NA	NA	44204002	44231116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
ES.17920.2	chr19	+	3045	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12299	-1	12299	1	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGCTCCAGAGTCTT	732	False	NA	NA	False	NA	NA	NA	44204006	44232456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
ES.17920.3	chr19	+	747	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	-91	-1	-91	1	multi-exon	FALSE	canonical	3	31	junction_1	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGAAATTCTCCTGTT	NA	False	NA	8	True	ATTAAA	-26	NA	44226162	44230458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44226317_44226814_44227048_44230098
ES.17921.1	chr19	-	206	1	Intergenic	novelGene_14862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGATTTCAAGGACAGCC	3240	False	NA	NA	False	NA	NA	NA	44228440	44228234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44228200_44228400
ES.17922.1	chr19	+	4243	3	Fusion	ENSMUSG00000118217.2_ENSMUSG00000025203.7	novel	818	4	NA	NA	5078	0	multi-exon	FALSE	canonical	1	54	junction_1	1282.5	3674	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	2340	False	NA	22	True	AATAAA	-23	NA	44246033	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_44246180_44289650_44289884_44291439
ES.17922.10	chr19	+	4930	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-265	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1282.37358051388	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	802	False	NA	22	True	AATAAA	-23	NA	44281847	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44283164_44283238_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.11	chr19	+	4688	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-249	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1091.93340456275	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	818	False	NA	22	True	AATAAA	-23	NA	44281863	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44283495_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.12	chr19	+	4989	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-245	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	1001.96922773773	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	822	False	NA	22	True	AATAAA	-23	NA	44281867	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44282698_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.13	chr19	+	6171	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-232	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1351.49384016354	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	835	False	NA	22	True	AATAAA	-23	NA	44281880	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44283495_44283626_44286478_44286610_44288047_44288254_44289650_44290687_44290742
ES.17922.15	chr19	+	4996	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1443	False	NA	18	True	AATAAA	-19	NA	44282488	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294470_44294548
ES.17922.16	chr19	+	5027	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1443	False	NA	22	True	AATAAA	-23	NA	44282488	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44295056_44295107
ES.17922.17	chr19	+	5008	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTCTCGTGGTGTTT	1443	False	NA	17	True	AATAAA	-18	NA	44282488	44295298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282715_44282780_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.18	chr19	+	4889	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGTCTCGTGGTGTT	1443	False	NA	16	True	AATAAA	-17	NA	44282488	44295297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292692_44292875
ES.17922.19	chr19	+	4973	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1009.02038576477	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1444	False	NA	18	True	AATAAA	-19	NA	44282489	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289700_44289800_44289884_44291439
ES.17922.2	chr19	+	5211	8	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-10618	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1220.99566263082	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	False	NA	22	True	AATAAA	-23	NA	44271494	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44271566_44278741_44278809_44282494_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.21	chr19	+	4925	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1091.93340456275	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1444	False	NA	22	True	AATAAA	-23	NA	44282489	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283495_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.22	chr19	+	1862	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	377	3216	-25	-330	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAATAGTTTTTAT	1444	False	NA	NA	False	NA	NA	NA	44282489	44292087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.23	chr19	+	3605	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTCTCGTGGTGTTT	1444	False	NA	17	True	AATAAA	-18	NA	44282489	44295298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44291576_44293043
ES.17922.24	chr19	+	6578	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1090.18559887755	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1444	False	NA	22	True	AATAAA	-23	NA	44282489	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44290687_44290742
ES.17922.25	chr19	+	4505	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTCGTGGTGTTTTG	1444	False	NA	19	True	AATAAA	-20	NA	44282489	44295300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294517_44295086
ES.17922.26	chr19	+	5025	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1009.02038576477	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1444	False	NA	22	True	AATAAA	-23	NA	44282489	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283424_44283476_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.27	chr19	+	5012	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1449	False	NA	22	True	AATAAA	-23	NA	44282494	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292317_44292377
ES.17922.28	chr19	+	4859	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1449	False	NA	22	True	AATAAA	-23	NA	44282494	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292054_44292267
ES.17922.29	chr19	+	5008	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1449	False	NA	22	True	AATAAA	-23	NA	44282494	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293508_44293572
ES.17922.3	chr19	+	5957	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	-502	0	-502	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	565	False	NA	22	True	AATAAA	-23	NA	44281610	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.31	chr19	+	4858	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1451	False	NA	22	True	AATAAA	-23	NA	44282496	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294683_44294895
ES.17922.32	chr19	+	5008	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1453	False	NA	18	True	AATAAA	-19	NA	44282498	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44291972_44292028
ES.17922.33	chr19	+	6625	5	ISM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	386	0	-16	0	intron_retention	FALSE	canonical	3	2597	junction_1	104.128526350852	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1453	False	NA	22	True	AATAAA	-23	NA	44282498	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650
ES.17922.34	chr19	+	2155	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	386	2914	-16	-28	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAACAATTTGTAGGAAA	1453	False	NA	NA	False	AGTAAA	-3	NA	44282498	44292389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.35	chr19	+	1612	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	386	3457	-16	-571	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCTTTTTCTTTGCTT	1453	False	NA	76	True	NA	NA	NA	44282498	44291846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.36	chr19	+	5026	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1453	False	NA	22	True	AATAAA	-23	NA	44282498	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293903_44293945
ES.17922.37	chr19	+	6574	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1090.18559887755	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1454	False	NA	18	True	AATAAA	-19	NA	44282499	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44290749_44290794
ES.17922.38	chr19	+	3090	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1454	False	NA	22	True	AATAAA	-23	NA	44282499	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292026_44294003
ES.17922.39	chr19	+	4183	2	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCAAAATGTCTCGTG	1454	False	NA	11	True	AATAAA	-12	NA	44282499	44295292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282835_44291444
ES.17922.4	chr19	+	5075	8	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-501	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1182.49209342828	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	566	False	NA	22	True	AATAAA	-23	NA	44281611	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281797_44281898_44281988_44282766_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.40	chr19	+	4350	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGTCTCGTGGTGTT	1454	False	NA	16	True	AATAAA	-17	NA	44282499	44295297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292454_44293165
ES.17922.41	chr19	+	4785	5	NIC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1177.55941994449	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1454	False	NA	22	True	AATAAA	-23	NA	44282499	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44282851_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.42	chr19	+	4331	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	387	737	-15	-737	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCTAGTGTTCTTGAG	1454	False	NA	NA	False	TTTAAA	-39	NA	44282499	44294566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.43	chr19	+	5174	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	387	-106	-15	106	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTTGAGGCCAGCCT	1454	False	NA	NA	False	NA	NA	NA	44282499	44295409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.44	chr19	+	4862	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1454	False	NA	22	True	AATAAA	-23	NA	44282499	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293944_44294149
ES.17922.45	chr19	+	4962	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1455	False	NA	22	True	AATAAA	-23	NA	44282500	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292700_44292804
ES.17922.46	chr19	+	4999	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1455	False	NA	22	True	AATAAA	-23	NA	44282500	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44295046_44295113
ES.17922.47	chr19	+	5037	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1087.97874979248	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTCGTGGTGTTTTG	1455	False	NA	19	True	AATAAA	-20	NA	44282500	44295300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286593_44288057_44288254_44289650_44289884_44291439
ES.17922.48	chr19	+	4847	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-14	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAAAATGTCTCGTGG	1455	False	NA	12	True	AATAAA	-13	NA	44282500	44295293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294009_44294218
ES.17922.49	chr19	+	3891	3	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1298.5	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1455	False	NA	22	True	AATAAA	-23	NA	44282500	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283525_44291944
ES.17922.5	chr19	+	6095	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-501	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1282.37358051388	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	566	False	NA	22	True	AATAAA	-23	NA	44281611	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283098_44283238_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.50	chr19	+	5057	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1077.15246831635	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1467	False	NA	18	True	AATAAA	-19	NA	44282512	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286472_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.52	chr19	+	3774	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	405	1276	3	-1276	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCCCCGTGGATCTGA	1472	False	NA	NA	False	AATAAA	-16	NA	44282517	44294027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.53	chr19	+	4934	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1473	False	NA	18	True	AATAAA	-19	NA	44282518	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44295024_44295134
ES.17922.55	chr19	+	4199	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	409	847	7	-847	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATGGATGGGTGAAGT	1476	False	NA	NA	False	GGGGCT	-20	NA	44282521	44294456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.56	chr19	+	4965	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1476	False	NA	22	True	AATAAA	-23	NA	44282521	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294973_44295053
ES.17922.57	chr19	+	4987	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1476	False	NA	22	True	AATAAA	-23	NA	44282521	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293514_44293572
ES.17922.58	chr19	+	1683	1	NIC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	8	-8212	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2916	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTTCTGCCCCTCTTT	1477	False	NA	NA	False	AATAAA	-31	NA	44282522	44284205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44282500_44284200
ES.17922.59	chr19	+	4903	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1087.97874979248	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1477	False	NA	22	True	AATAAA	-23	NA	44282522	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286592_44288171_44288254_44289650_44289884_44291439
ES.17922.6	chr19	+	5031	8	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-501	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1182.49209342828	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	566	False	NA	18	True	AATAAA	-19	NA	44281611	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281757_44281898_44281988_44282766_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.60	chr19	+	4905	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1477	False	NA	22	True	AATAAA	-23	NA	44282522	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292023_44292162
ES.17922.61	chr19	+	4554	5	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1155.36106369394	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1477	False	NA	22	True	AATAAA	-23	NA	44282522	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288212_44291655
ES.17922.62	chr19	+	4947	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAAAATGTCTCGTGGT	1477	False	NA	13	True	AATAAA	-14	NA	44282522	44295294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292299_44292387
ES.17922.64	chr19	+	4964	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTCTCGTGGTGTTT	1480	False	NA	17	True	AATAAA	-18	NA	44282525	44295298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44291972_44292044
ES.17922.65	chr19	+	4999	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1480	False	NA	22	True	AATAAA	-23	NA	44282525	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292090_44292132
ES.17922.66	chr19	+	4972	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAATGTCTCGTGGTGT	1480	False	NA	15	True	AATAAA	-16	NA	44282525	44295296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282750_44282812_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.67	chr19	+	4984	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGTCTCGTGGTGTT	1481	False	NA	16	True	AATAAA	-17	NA	44282526	44295297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294123_44294173
ES.17922.68	chr19	+	4094	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1481	False	NA	18	True	AATAAA	-19	NA	44282526	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293286_44294228
ES.17922.69	chr19	+	4912	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1484	False	NA	22	True	AATAAA	-23	NA	44282529	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294612_44294737
ES.17922.7	chr19	+	5448	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-500	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	1003.45364727137	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	567	False	NA	22	True	AATAAA	-23	NA	44281612	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44282494_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.70	chr19	+	4969	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	17	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAAAATGTCTCGTGG	1486	False	NA	12	True	AATAAA	-13	NA	44282531	44295293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294913_44294969
ES.17922.71	chr19	+	4980	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1486	False	NA	22	True	AATAAA	-23	NA	44282531	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293508_44293563
ES.17922.72	chr19	+	4499	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTCTCGTGGTGTTT	1487	False	NA	17	True	AATAAA	-18	NA	44282532	44295298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44292276_44292806
ES.17922.73	chr19	+	4577	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGTCTCGTGGTGTT	1487	False	NA	16	True	AATAAA	-17	NA	44282532	44295297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294514_44294965
ES.17922.74	chr19	+	4988	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCGTGGTGTTTTGGC	1487	False	NA	21	True	AATAAA	-22	NA	44282532	44295302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293317_44293362
ES.17922.75	chr19	+	4430	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	420	605	18	-605	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	3637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGACGATAATGAGTT	1487	False	NA	NA	False	NA	NA	NA	44282532	44294698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.76	chr19	+	4663	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1487	False	NA	18	True	AATAAA	-19	NA	44282532	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44293538_44293905
ES.17922.77	chr19	+	8025	4	NIC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	-4	intron_retention	FALSE	canonical	3	2597	junction_1	110.670682658055	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	1487	False	NA	18	True	AATAAA	-19	NA	44282532	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44282851_44283342_44283626_44286478_44288254_44289650
ES.17922.79	chr19	+	4990	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1487	False	NA	22	True	AATAAA	-23	NA	44282532	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294350_44294394
ES.17922.8	chr19	+	4955	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-279	0	at_least_one_novel_splicesite	FALSE	canonical	2	175	junction_1	944.092333055053	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	788	False	NA	22	True	AATAAA	-23	NA	44281833	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44282766_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.80	chr19	+	5053	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1087.97874979248	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1493	False	NA	22	True	AATAAA	-23	NA	44282538	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288023_44288254_44289650_44289884_44291439
ES.17922.81	chr19	+	3840	2	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1495	False	NA	22	True	AATAAA	-23	NA	44282540	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282677_44291599
ES.17922.82	chr19	+	4704	7	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	39	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.02038576477	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATGTCTCGTGGTGTT	1508	False	NA	16	True	AATAAA	-17	NA	44282553	44295297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439_44294843_44295146
ES.17922.84	chr19	+	4719	5	ISM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	1228	0	826	0	3prime_fragment	FALSE	canonical	3	2619	junction_4	98.1325634027768	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	2295	False	NA	22	True	AATAAA	-23	NA	44283340	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.85	chr19	+	5956	4	ISM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	2839	5	2437	-5	3prime_fragment	FALSE	canonical	3	2619	junction_3	111.2874156807	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTCTCGTGGTGTTT	3906	False	NA	17	True	AATAAA	-18	NA	44284951	44295298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.86	chr19	+	4677	5	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	2676	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1177.55941994449	3672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	4145	False	NA	18	True	AATAAA	-19	NA	44285190	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44285438_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.87	chr19	+	8537	2	NIC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	2855	0	intron_retention	FALSE	canonical	3	2867	junction_1	0	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	4324	False	NA	22	True	AATAAA	-23	NA	44285369	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44288254_44289650
ES.17922.88	chr19	+	7692	2	ISM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	4061	0	3659	0	intron_retention	FALSE	canonical	3	2645	junction_1	0	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	5128	False	NA	22	True	AATAAA	-23	NA	44286173	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44286610_44288047
ES.17922.89	chr19	+	3057	4	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	5546	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1297.02026027181	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAATGTCTCGTGGTGT	7015	False	NA	15	True	AATAAA	-16	NA	44288060	44295296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44288254_44289650_44289884_44291439_44292692_44293917
ES.17922.9	chr19	+	4858	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-266	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	1073.59396421552	3673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	801	False	NA	22	True	AATAAA	-23	NA	44281846	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44281988_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ES.17922.90	chr19	+	3973	3	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	7185	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1309.5	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	8654	False	NA	22	True	AATAAA	-23	NA	44289699	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44289884_44291439_44291600_44291674
ES.17922.91	chr19	+	3196	3	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	9085	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	False	NA	22	True	AATAAA	-23	NA	44291599	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44292372_44292806_44295050_44295122
ES.17922.92	chr19	+	3284	2	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	9450	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	False	NA	22	True	AATAAA	-23	NA	44291964	44295303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44292388_44292442
ES.17922.93	chr19	+	3202	2	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	9530	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAAAATGTCTCGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	44292044	44295294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44292315_44292362
ES.17922.94	chr19	+	1948	2	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	10788	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCTCGTGGTGTTTT	NA	False	NA	18	True	AATAAA	-19	NA	44293302	44295299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44294144_44294192
ES.17923.1	chr19	+	2672	1	Intergenic	novelGene_14863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGACTA	7	True	NA	NA	False	NA	NA	NA	44296649	44299321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44296600_44299300
ES.17923.2	chr19	+	174	1	Intergenic	novelGene_14864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACTTG	9	True	NA	NA	False	NA	NA	NA	44298102	44298276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44298100_44298300
ES.17924.1	chr19	+	144	1	Intergenic	novelGene_14865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	4918	False	NA	NA	False	NA	NA	NA	44310850	44310994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44310800_44311000
ES.17925.1	chr19	-	156	1	Intergenic	novelGene_14866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	44311301	44311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44311100_44311300
ES.17926.1	chr19	-	178	1	Intergenic	novelGene_14867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATCCATTCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44357673	44357495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44357500_44357700
ES.17927.1	chr19	-	181	1	Intergenic	novelGene_14868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTAAAGTACTAGTA	NA	False	NA	NA	False	NA	NA	NA	44365722	44365541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44365500_44365700
ES.17928.1	chr19	-	195	1	Intergenic	novelGene_14869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCTGCGAGACGGCCT	2519	False	NA	NA	False	NA	NA	NA	44375681	44375486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44375500_44375700
ES.17929.10	chr19	-	4678	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.682809261507	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	7438	False	NA	-5	True	AATAAA	-22	NA	44396150	44382893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44383143_44383298_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ES.17929.11	chr19	-	3650	2	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGGAGCTTTTGTG	-3	True	NA	-11	True	AATAAA	-16	NA	44396147	44382899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44386344_44395941
ES.17929.12	chr19	-	4512	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	254.682809261507	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGGAGCTTTTGTG	7450	False	NA	-11	True	AATAAA	-16	NA	44396138	44382899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44385382_44385685_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ES.17929.14	chr19	-	3874	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2765	-1104	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTCCCCAGATCTGA	9687	False	NA	NA	False	AATAAA	-26	NA	44399083	44383997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
ES.17929.15	chr19	-	1736	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	-168	3264	2	274	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACATTATATATTTCT	7272	False	NA	1	True	NA	NA	NA	44396316	44386157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ES.17929.16	chr19	-	1366	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-813	158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	254.682809261507	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGGTGTTAATGATGCA	9612	False	NA	-75	True	NA	NA	NA	44397131	44386273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44397086
ES.17929.3	chr19	-	4906	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_1	254.682809261507	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	7292	False	NA	-5	True	AATAAA	-22	NA	44396296	44382893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44383171_44383244_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ES.17929.4	chr19	-	5044	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2831	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	9621	False	NA	-5	True	AATAAA	-22	NA	44399149	44382893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
ES.17929.5	chr19	-	3361	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.682809261507	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	8	True	NA	-5	True	AATAAA	-22	NA	44396095	44382893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44383973_44385390_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ES.17929.8	chr19	-	2855	3	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	9186	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	10001	False	NA	-5	True	AATAAA	-22	NA	44385943	44382893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44383170_44383286_44385670_44385747
ES.1793.1	chr1	+	2148	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	14	1	14	-1	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTGGACTGATTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	165591328	165602876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ES.1793.2	chr1	+	616	3	ISM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	14	4560	14	-3170	5prime_fragment	FALSE	canonical	3	459	junction_1	1	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTTGGACTACTTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	165591328	165598317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_165591708_165597381_165597502_165598200
ES.1793.3	chr1	+	908	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	14	1241	14	149	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGCCATTCATTAT	NA	False	NA	25	True	AAAAAG	-32	NA	165591328	165601636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ES.1793.4	chr1	+	715	4	NNC	ENSMUSG00000040713.13	novel	2163	4	NA	NA	-1224	141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.010144703808	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTCAGAGAAAAATGCCA	NA	False	NA	17	True	AAAAAG	-24	NA	165595820	165601628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165596015_165597381_165597502_165598200_165598386_165601412
ES.1793.5	chr1	+	1829	4	NNC	ENSMUSG00000040713.13	novel	2163	4	NA	NA	-296	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.010144703808	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTGTGTTGGACTGA	NA	False	NA	NA	False	ATTAAA	-12	NA	165596748	165602871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165596814_165597381_165597502_165598200_165598386_165601412
ES.17930.1	chr19	-	130	1	Intergenic	novelGene_14870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44470622	44470492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44470500_44470600
ES.17931.1	chr19	+	3478	2	ISM	ENSMUSG00000036961.6	ENSMUST00000237970.2	826	3	903	-2873	903	590	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGGAGTCAATGAAAACTT	6179	False	NA	NA	False	ATTAAA	-17	NA	44499662	44503302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44499814_44499975
ES.17932.1	chr19	+	228	1	Intergenic	novelGene_14871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCTCTACAGATCCAGA	6357	False	NA	NA	False	NA	NA	NA	44517594	44517822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44517600_44517800
ES.17933.1	chr19	+	176	1	Intergenic	novelGene_14872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	44530208	44530384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44530200_44530400
ES.17934.1	chr19	-	5695	23	NNC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	24	1345	intron_retention	TRUE	canonical	0	0	junction_20	5.83821126234754	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGATTTGTGTTATAGG	NA	False	NA	NA	False	TTTAAA	-13	NA	44534262	44504050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524571_44531704_44531829_44532139_44532252_44534226
ES.17934.10	chr19	-	3802	25	FSM	ENSMUSG00000051984.14	ENSMUST00000111985.2	3548	25	10	-264	10	14	multi-exon	FALSE	canonical	2	5	junction_17	4.98051759916131	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATCTTACAGGTCTTCT	NA	False	NA	NA	False	AGTAAA	-33	NA	44534276	44505381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.11	chr19	-	3948	26	NNC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	-22	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	6.01012479071774	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACATCTTACAGGTCTT	NA	False	NA	NA	False	AGTAAA	-31	NA	44534325	44505383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44528533_44528609_44531704_44531829_44532139_44532252_44534226
ES.17934.12	chr19	-	2043	12	NIC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	-5650	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	6.62327476366799	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTCTGCCACGACA	NA	False	NA	NA	False	AGTAAA	-18	NA	44514682	44505396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512867_44513014_44513559_44513687_44513914_44514094_44514654
ES.17934.13	chr19	-	4091	22	NIC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_9	6.02300954597697	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTCTGCCACGACA	NA	False	NA	NA	False	AGTAAA	-18	NA	44534303	44505396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520895_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.14	chr19	-	3711	24	NNC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.82706026912046	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCCTCTGCCACGA	NA	False	NA	NA	False	AGTAAA	-16	NA	44534297	44505398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513692_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.15	chr19	-	4502	25	NNC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_2	5.58208941367139	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCTGCCTCTGCCACG	NA	False	NA	NA	False	AGTAAA	-15	NA	44534292	44505399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506206_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44531704_44531829_44532139_44532252_44534226
ES.17934.2	chr19	-	4690	6	NIC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	-4999	1045	intron_retention	FALSE	canonical	2	8	junction_3	6.97423830966508	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCCTCTGCATCCT	NA	False	NA	1	True	AATAAA	-21	NA	44514031	44504350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559
ES.17934.3	chr19	-	4861	25	FSM	ENSMUSG00000051984.14	ENSMUST00000111985.2	3548	25	-18	-1295	-1	1045	multi-exon	FALSE	canonical	2	5	junction_17	4.98051759916131	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCCTCTGCATCCT	NA	False	NA	1	True	AATAAA	-21	NA	44534304	44504350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.4	chr19	-	4798	25	NNC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	4	1045	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.36562489888695	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCTCCTCTGCATCCT	NA	False	NA	1	True	AATAAA	-21	NA	44534282	44504350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520773_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.5	chr19	-	5373	25	NNC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	-6	1044	intron_retention	FALSE	canonical	0	0	junction_22	5.2221483446311	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTCTCCTCTGCATCC	NA	False	NA	0	True	AATAAA	-20	NA	44534292	44504351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524571_44531704_44531829_44532139_44532252_44534226
ES.17934.6	chr19	-	5893	24	NNC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	25	1044	intron_retention	FALSE	canonical	1	1	junction_12	5.52259493539186	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTCTCCTCTGCATCC	NA	False	NA	0	True	AATAAA	-20	NA	44534261	44504351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44504487_44505624_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513785_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44517336_44520119_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ES.17934.7	chr19	-	4983	26	FSM	ENSMUSG00000051984.14	ENSMUST00000063632.14	3939	26	0	-1044	0	1044	multi-exon	FALSE	canonical	1	1	junction_23	5.22302594288024	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTCTCCTCTGCATCC	NA	False	NA	0	True	AATAAA	-20	NA	44534303	44504351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44531704_44531829_44532139_44532252_44534226
ES.17934.8	chr19	-	3144	23	NNC	ENSMUSG00000051984.14	novel	3548	25	NA	NA	-2	1043	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.36428568115896	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGTCTCCTCTGCATC	NA	False	NA	-1	True	AATAAA	-19	NA	44534305	44504352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44504487_44505810_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44522679_44522823_44523126_44523271_44532139_44532252_44534226
ES.17934.9	chr19	-	5412	24	NNC	ENSMUSG00000051984.14	novel	3939	26	NA	NA	-3	1042	intron_retention	FALSE	canonical	0	0	junction_11	5.98296257800681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCCGTCTCCTCTGCAT	NA	False	NA	-2	True	AATAAA	-18	NA	44534306	44504353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513692_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520895_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44531704_44531829_44532139_44532252_44534226
ES.17935.1	chr19	-	4618	4	NIC	ENSMUSG00000025204.11	novel	2142	5	NA	NA	-1	1	intron_retention	FALSE	canonical	3	4735	junction_3	431.669626759478	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCTGGATTTTGTAAA	1990	False	NA	NA	False	AATAAA	-17	NA	44543863	44537009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44541293_44542107_44542208_44543369_44543497_44543755
ES.17935.10	chr19	-	620	5	FSM	ENSMUSG00000025204.11	ENSMUST00000168083.2	603	5	-16	-1	5	1	multi-exon	FALSE	canonical	3	85	junction_4	2211.89753096747	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTCTGGTTTCTGTGTC	1979	False	NA	-19	True	AATAAA	-17	NA	44543874	44538690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543454_44543755
ES.17935.11	chr19	-	636	5	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2274.37281189782	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGCTCTGGTTTCTGTG	1992	False	NA	-21	True	AATAAA	-15	NA	44543861	44538692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44538840_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ES.17935.2	chr19	-	2135	5	FSM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	2	5	-1	-5	multi-exon	FALSE	canonical	3	12	junction_1	2269.24749366392	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGGTTTCTGGATTT	1990	False	NA	NA	False	AATAAA	-11	NA	44543863	44537015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44538660_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ES.17935.3	chr19	-	1728	5	FSM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	1	413	1	-413	multi-exon	FALSE	canonical	3	12	junction_1	2269.24749366392	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGGTGGTACAAGCT	1989	False	NA	NA	False	TTTAAA	-5	NA	44543864	44537423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44538660_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ES.17935.4	chr19	-	683	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCTTTCTCCAGGAA	1973	False	NA	-5	True	AATAAA	-31	NA	44543880	44538676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ES.17935.6	chr19	-	2707	2	ISM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	1657	1676	-889	5	internal_fragment	FALSE	canonical	3	5043	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTCTGTGTCTCTT	3645	False	NA	-15	True	AATAAA	-21	NA	44542208	44538686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_44541293_44542107
ES.17935.7	chr19	-	1823	4	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	-1	1	intron_retention	FALSE	canonical	2	98	junction_3	2196.0313193476	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTCTGGTTTCTGTGTC	1990	False	NA	-19	True	AATAAA	-17	NA	44543863	44538690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44538852_44541136_44541293_44542107_44543497_44543746
ES.17935.8	chr19	-	1816	4	NIC	ENSMUSG00000025204.11	novel	680	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	4404	junction_1	260.926979994191	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTCTGGTTTCTGTGTC	1988	False	NA	-19	True	AATAAA	-17	NA	44543865	44538690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_44538852_44541136_44541293_44542107_44543497_44543755
ES.17936.1	chr19	+	6237	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-20	-23	-20	23	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAGTGATGTGTA	NA	False	NA	34	True	TTTAAA	-4	NA	44551268	44564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.10	chr19	+	2565	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	9	3620	9	-3620	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGATTTTATTCTTT	NA	False	NA	NA	False	NA	NA	NA	44551297	44561093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.11	chr19	+	2837	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	10	3347	10	-3347	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCATGCCTCCATCTCT	NA	False	NA	NA	False	AATACA	-28	NA	44551298	44561366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.12	chr19	+	9974	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	10	-3790	10	3790	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTTGGTTTTGATT	NA	False	NA	NA	False	NA	NA	NA	44551298	44568503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.13	chr19	+	1366	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	11	4817	11	-4817	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCAGGGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	44551299	44559896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.14	chr19	+	6133	7	ISM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	288	8	288	-8	3prime_fragment	FALSE	canonical	3	98	junction_4	14.1027972008708	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTATAGTATGTGACT	NA	False	NA	3	True	NA	NA	NA	44551576	44564705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.15	chr19	+	2192	1	Intergenic	novelGene_14873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCATTGTTCTGTTTTC	3601	False	NA	NA	False	NA	NA	NA	44568667	44570859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44568700_44570900
ES.17936.2	chr19	+	1147	5	ISM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-3	6478	-3	5844	5prime_fragment	FALSE	canonical	3	103	junction_3	12.2576506721313	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGACTGTATGAGTTTT	NA	False	NA	NA	False	CATAAA	-25	NA	44551285	44558235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842
ES.17936.3	chr19	+	1592	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	4604	-2	-4604	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGAGTCTGCCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	44551286	44560109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.4	chr19	+	6147	7	NNC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.1362715827315	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTATAGTATGTGACTTA	NA	False	NA	5	True	NA	NA	NA	44551286	44564707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557971_44558665_44558777_44559552
ES.17936.5	chr19	+	10212	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	-2	-4016	-2	4016	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAAGTCTCATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	44551286	44568729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ES.17936.6	chr19	+	1827	8	NNC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	3	-4360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.7240791448512	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAGTACCAGCTCCT	NA	False	NA	NA	False	AATACA	-16	NA	44551291	44560353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558392_44558665_44558777_44559552
ES.17936.7	chr19	+	6569	7	NIC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	5	-2	intron_retention	FALSE	canonical	3	103	junction_3	12.0749971244533	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATGTGACTTATTTA	NA	False	NA	9	True	NA	NA	NA	44551293	44564711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44558396_44558665_44558777_44559552
ES.17936.8	chr19	+	7517	6	NIC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	5	23	intron_retention	FALSE	canonical	3	103	junction_3	12.2539789456323	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCAGTGATGTGTA	NA	False	NA	34	True	TTTAAA	-4	NA	44551293	44564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44558396_44558665_44558777_44559552
ES.17936.9	chr19	+	8900	6	NIC	ENSMUSG00000036450.5	novel	6194	8	NA	NA	8	-5	intron_retention	FALSE	canonical	3	103	junction_2	9.78570385818005	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATAGTATGTGACTTAT	NA	False	NA	6	True	NA	NA	NA	44551296	44564708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44551494_44551728_44554466_44556773_44556920_44557842_44558396_44558665_44558777_44559552
ES.17937.1	chr19	-	2474	6	Antisense	novelGene_ENSMUSG00000036450.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCCACAAATCTAAACC	NA	False	NA	NA	False	NA	NA	NA	44560606	44553473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_44554464_44556771_44556917_44557839_44557949_44558330_44558394_44558663_44558775_44559550
ES.17937.2	chr19	-	2852	5	Antisense	novelGene_ENSMUSG00000036450.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAGCCACAAATCTA	NA	False	NA	NA	False	NA	NA	NA	44560606	44553477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_44554464_44556771_44556917_44557839_44558394_44558663_44558775_44559550
ES.17937.3	chr19	-	5408	1	Antisense	novelGene_ENSMUSG00000036450.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44558912	44553504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_44553500_44558900
ES.17937.4	chr19	-	2198	2	Antisense	novelGene_ENSMUSG00000036450.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44558011	44553505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_44554464_44556771
ES.17938.1	chr19	+	178	1	Intergenic	novelGene_14874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	44631626	44631804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44631600_44631800
ES.17939.1	chr19	-	1439	3	NNC	ENSMUSG00000097683.3	novel	2046	2	NA	NA	-25465	-598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTCCTGGTCTTAGGC	NA	False	NA	NA	False	NA	NA	NA	44709364	44674847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44676083_44705793_44705943_44709309
ES.17939.2	chr19	-	150	1	Intergenic	novelGene_14875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAACAAA	-14	True	NA	NA	False	NA	NA	NA	44696402	44696252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44696300_44696400
ES.17939.3	chr19	-	1859	3	Intergenic	novelGene_14876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTTCTAGGCCATC	NA	False	NA	NA	False	NA	NA	NA	44709539	44700760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44702336_44705793_44705943_44709404
ES.1794.1	chr1	+	1938	7	NNC	ENSMUSG00000089829.3	novel	2181	3	NA	NA	-1029	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGAGTATCCTGAAACA	NA	False	NA	NA	False	AATAAA	-41	NA	165607614	165616957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165607642_165607915_165608063_165608388_165608557_165608679_165608840_165609409_165609737_165610679_165610816_165615984
ES.1794.2	chr1	+	197	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTCTAGATTTAAGCC	NA	False	NA	NA	False	NA	NA	NA	165612860	165613057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165612900_165613100
ES.17940.1	chr19	+	1925	8	NNC	ENSMUSG00000004231.16	novel	4358	10	NA	NA	27927	-774	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.04978131833565	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCTAC	NA	False	NA	NA	False	NA	NA	NA	44776280	44825516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44776381_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ES.17941.1	chr19	-	330	1	Intergenic	novelGene_14877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAGAGAC	NA	False	NA	NA	False	NA	NA	NA	44782136	44781806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44781800_44782100
ES.17942.1	chr19	-	2768	1	Intergenic	novelGene_14878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGTAG	NA	False	NA	NA	False	GATAAA	-19	NA	44801263	44798495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44798500_44801300
ES.17943.1	chr19	+	6905	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-50	-606	-50	495	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTTTGATTGAGTAGT	993	False	NA	15	True	ATTAAA	-28	NA	44919539	44972233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.10	chr19	+	5694	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	1	554	1	19	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCTGGTAGCAGCCTT	1044	False	NA	NA	False	AATAAA	-32	NA	44919590	44971073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.12	chr19	+	6143	15	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	1	483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.3489492504754	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTCTGGCAACTTT	1044	False	NA	3	True	ATTAAA	-16	NA	44919590	44972221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936476_44956032_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.13	chr19	+	6142	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	1	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	50.5351912587214	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1053	False	NA	64	True	NA	NA	NA	44919599	44971698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.14	chr19	+	4060	13	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	1	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	74.2702927750315	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1053	False	NA	64	True	NA	NA	NA	44919599	44971698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44923426_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969000
ES.17943.16	chr19	+	6831	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	1	487	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_19	47.5808103966877	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	1053	False	NA	7	True	ATTAAA	-20	NA	44919599	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969000
ES.17943.17	chr19	+	6572	19	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	-1	483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	50.0953411993226	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTCTGGCAACTTT	1054	False	NA	3	True	ATTAAA	-16	NA	44919600	44972221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949218_44956001_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.18	chr19	+	8157	19	ISM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	11	-593	-1	482	intron_retention	FALSE	canonical	3	153	junction_11	22.3786163364897	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGTCTGGCAACTT	1054	False	NA	2	True	ATTAAA	-15	NA	44919600	44972220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599
ES.17943.19	chr19	+	5967	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-167	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	49.6762357175111	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTGTGTAACTGTT	1055	False	NA	14	True	ATTAAA	-14	NA	44919601	44971460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.20	chr19	+	6530	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	484	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.221135923571	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCTGGCAACTTTT	1055	False	NA	4	True	ATTAAA	-17	NA	44919601	44972222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44923804_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.22	chr19	+	6766	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	487	combination_of_known_splicesites	FALSE	canonical	2	12	junction_18	47.7054038401894	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	1055	False	NA	7	True	ATTAAA	-20	NA	44919601	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44968994
ES.17943.24	chr19	+	8391	18	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	487	intron_retention	FALSE	canonical	0	0	junction_8	51.3987061084166	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	1055	False	NA	7	True	ATTAAA	-20	NA	44919601	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937467_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44962125_44964067_44964155_44967599
ES.17943.25	chr19	+	5938	19	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	65.2194775118107	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTGTGTGTAACTGT	1055	False	NA	13	True	ATTAAA	-13	NA	44919601	44971459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969022
ES.17943.27	chr19	+	6239	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-40	combination_of_known_splicesites	FALSE	canonical	2	12	junction_18	47.7054038401894	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1055	False	NA	64	True	NA	NA	NA	44919601	44971698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44968994
ES.17943.28	chr19	+	5433	15	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	484	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	68.1106542656125	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCTGGCAACTTTT	1055	False	NA	4	True	ATTAAA	-17	NA	44919601	44972222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44968994
ES.17943.29	chr19	+	6993	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	748	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	49.6762357175111	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTAGCTTGATGCC	1055	False	NA	NA	False	NA	NA	NA	44919601	44972486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.3	chr19	+	6118	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-21	152	-21	-152	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGCCTTTCCTGACCT	1022	False	NA	29	True	ATTAAA	-29	NA	44919568	44971475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.30	chr19	+	6045	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.975713354835	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGTAACTGTTTGC	1055	False	NA	17	True	ATTAAA	-17	NA	44919601	44971463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969022
ES.17943.32	chr19	+	5101	16	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.6120391798937	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGTCTGGCAACTT	1055	False	NA	2	True	ATTAAA	-15	NA	44919601	44972220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44923681_44937497_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.33	chr19	+	6274	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	48.0396881166919	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATATATATATATC	1055	False	NA	86	True	NA	NA	NA	44919601	44971720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937466_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.34	chr19	+	6302	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.975713354835	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATATATATATATC	1055	False	NA	86	True	NA	NA	NA	44919601	44971720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969022
ES.17943.35	chr19	+	6064	20	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	-167	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_19	47.5808103966877	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTGTGTAACTGTT	1055	False	NA	14	True	ATTAAA	-14	NA	44919601	44971460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969000
ES.17943.36	chr19	+	6740	19	ISM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	22	813	10	0	intron_retention	FALSE	canonical	3	153	junction_11	22.3786163364897	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACAGTGTGTAAATAT	1065	False	NA	NA	False	TATAAA	-20	NA	44919611	44970814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599
ES.17943.37	chr19	+	4423	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	46	1780	34	-967	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGGCCTTGATGGTGT	1089	False	NA	NA	False	NA	NA	NA	44919635	44969847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.39	chr19	+	5157	18	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	4376	-152	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	49.6582089514209	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGCCTTTCCTGACCT	5431	False	NA	29	True	ATTAAA	-29	NA	44923977	44971475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957584_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.4	chr19	+	6361	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-19	-93	-19	-18	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATATATATATATC	1024	False	NA	86	True	NA	NA	NA	44919570	44971720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.40	chr19	+	5717	16	FSM	ENSMUSG00000036097.9	ENSMUST00000236057.2	3831	16	-478	-1408	-478	484	multi-exon	FALSE	canonical	3	153	junction_7	22.4950364895607	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGTCTGGCAACTTTT	NA	False	NA	4	True	ATTAAA	-17	NA	44929891	44972222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.42	chr19	+	4734	17	NNC	ENSMUSG00000036097.9	novel	3831	16	NA	NA	151	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.4396627884461	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATATATATATATC	NA	False	NA	86	True	NA	NA	NA	44930520	44971720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44956870_44957019_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.43	chr19	+	4486	14	NNC	ENSMUSG00000036097.9	novel	4347	16	NA	NA	5153	485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.9221775401173	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGTCTGGCAACTTTTG	995	False	NA	5	True	ATTAAA	-18	NA	44936443	44972223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44936492_44937410_44937467_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.44	chr19	+	4408	13	NNC	ENSMUSG00000036097.9	novel	4347	16	NA	NA	6236	487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.8491212840207	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	2078	False	NA	7	True	ATTAAA	-20	NA	44937526	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44969022
ES.17943.45	chr19	+	3635	1	Intergenic	novelGene_14881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTACAACTGCGTGTGG	1988	False	NA	NA	False	NA	NA	NA	44943485	44947120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44943500_44947100
ES.17943.46	chr19	+	3021	7	ISM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	26183	277	26183	-166	3prime_fragment	FALSE	canonical	3	195	junction_3	12.0646407139026	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTGTGTAACTGTTT	76	False	NA	15	True	ATTAAA	-15	NA	44957473	44971461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.47	chr19	+	3683	6	ISM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	28744	-483	28744	483	3prime_fragment	FALSE	canonical	3	195	junction_2	7.87400787401181	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTGTCTGGCAACTTT	2637	False	NA	3	True	ATTAAA	-16	NA	44960034	44972221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.48	chr19	+	3380	3	ISM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	32776	-479	32776	479	3prime_fragment	FALSE	canonical	3	203	junction_1	7	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAAACGTGTCTGGCAA	6669	False	NA	-1	True	ATTAAA	-12	NA	44964066	44972217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44964155_44967599_44967669_44968994
ES.17943.49	chr19	+	6057	2	ISM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	33552	-487	33552	487	3prime_fragment	FALSE	canonical	3	217	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	7445	False	NA	7	True	ATTAAA	-20	NA	44964842	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44967669_44968994
ES.17943.5	chr19	+	5452	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-13	810	-13	3	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTGTAAATATTTT	1030	False	NA	NA	False	TATAAA	-23	NA	44919576	44970817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.50	chr19	+	3547	1	NIC	ENSMUSG00000036097.9	novel	4347	16	NA	NA	36859	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAG	NA	False	NA	62	True	NA	NA	NA	44968149	44971696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44968100_44971700
ES.17943.6	chr19	+	7126	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	-13	-864	-13	753	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGCTTGATGCCTTCTT	1030	False	NA	NA	False	NA	NA	NA	44919576	44972491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.7	chr19	+	6037	18	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	-13	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.1800761368859	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATATATATATATC	1030	False	NA	86	True	NA	NA	NA	44919576	44971720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937467_44947443_44947520_44949172_44949315_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17943.9	chr19	+	6813	19	NNC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	1	487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.7205184087695	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGCAACTTTTGAT	1044	False	NA	7	True	ATTAAA	-20	NA	44919590	44972225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44919895_44923365_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ES.17944.1	chr19	-	2180	1	Intergenic	novelGene_14879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGATCCTGGTCTGTAAA	NA	False	NA	NA	False	NA	NA	NA	44926639	44924459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44924500_44926600
ES.17945.1	chr19	-	3272	6	NNC	ENSMUSG00000118204.2	novel	737	4	NA	NA	4727	13029	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAATTTGATTATGTTC	NA	False	NA	NA	False	NA	NA	NA	44956993	44935782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44937579_44940507_44940609_44947441_44947519_44949171_44949315_44955405_44955507_44955939
ES.17945.2	chr19	-	1906	2	Intergenic	novelGene_14880	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAACTGTAAAAATATATG	NA	False	NA	NA	False	NA	NA	NA	44956993	44943147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44944530_44956469
ES.17945.3	chr19	-	4653	3	NNC	ENSMUSG00000118204.2	novel	815	4	NA	NA	4727	2995	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGTGCCGTGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	44956993	44945816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_44949315_44955405_44955507_44955939
ES.17945.4	chr19	-	578	1	Intergenic	novelGene_14882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44948603	44948025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_44948000_44948600
ES.17946.1	chr19	+	4387	15	FSM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	161	0	1	0	multi-exon	FALSE	canonical	1	6	junction_7	2.98037800643215	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	False	NA	4	True	AATAAA	-18	NA	44977700	44991836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ES.17946.10	chr19	+	178	1	Intergenic	novelGene_14883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATACAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44983635	44983813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_44983600_44983800
ES.17946.11	chr19	+	2198	5	FSM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	8	junction_1	67.8122407829147	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCGTTTTTTCTTACT	1657	False	NA	28	True	AATGAA	-21	NA	44994100	45001203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44994627_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.12	chr19	+	4669	4	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	620	-2	-275	2	3prime_fragment	FALSE	canonical	3	153	junction_1	12.2836838484589	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCGTTTTTTCTTACT	2278	False	NA	28	True	AATGAA	-21	NA	44994721	45001203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.13	chr19	+	5865	2	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	624	0	-271	0	intron_retention	FALSE	canonical	3	153	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2282	False	NA	26	True	AATGAA	-19	NA	44994725	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44997960_44998570
ES.17946.14	chr19	+	5519	3	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	792	0	-103	0	intron_retention	FALSE	canonical	3	153	junction_1	13.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2450	False	NA	26	True	AATGAA	-19	NA	44994893	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44997960_44998570_44998679_44998856
ES.17946.15	chr19	+	3588	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-98	-2	-98	2	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCGTTTTTTCTTACT	2455	False	NA	28	True	AATGAA	-21	NA	44994898	45001203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.16	chr19	+	3135	4	ISM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-82	1459	-82	-1459	5prime_fragment	FALSE	canonical	3	97	junction_1	34.5671648951558	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGTTTTACCTGCATG	2471	False	NA	NA	False	AATAAA	-16	NA	44994914	44999742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856
ES.17946.17	chr19	+	4647	3	NIC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-81	-4	intron_retention	FALSE	canonical	3	153	junction_1	1	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCGTTTTTT	2472	False	NA	22	True	AATGAA	-15	NA	44994915	45001197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44997960_44998570_44998999_45000022
ES.17946.18	chr19	+	4875	4	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-81	0	intron_retention	FALSE	non_canonical	0	0	junction_1	79.6171394166413	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2472	False	NA	26	True	AATGAA	-19	NA	44994915	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44997980_44998188_44998679_44998856_44998999_45000022
ES.17946.19	chr19	+	3532	5	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-66	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.2355248454028	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTGCGTTTTTTCTT	2487	False	NA	25	True	AATGAA	-18	NA	44994930	45001200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44996794_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.2	chr19	+	4258	16	NIC	ENSMUSG00000025207.17	novel	4552	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	3.47307100736829	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGAGTGTCTGCTTGG	NA	False	NA	3	True	AATAAA	-17	NA	44977700	44991835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606_44990658_44990785
ES.17946.20	chr19	+	4018	3	ISM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	834	1459	-61	-1459	internal_fragment	FALSE	canonical	3	153	junction_1	13.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGTTTTACCTGCATG	2492	False	NA	NA	False	AATAAA	-16	NA	44994935	44999742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44997960_44998570_44998679_44998856
ES.17946.21	chr19	+	4597	2	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-61	-1460	intron_retention	FALSE	non_canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTGTTTTACCTGCAT	2492	False	NA	NA	False	AATAAA	-15	NA	44994935	44999741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44997980_44998188
ES.17946.22	chr19	+	3725	4	NIC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-61	-2	intron_retention	FALSE	canonical	3	97	junction_1	26.8824602048746	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGCGTTTTTTCT	2492	False	NA	24	True	AATGAA	-17	NA	44994935	45001199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44996815_44997718_44997960_44998570_44998999_45000022
ES.17946.23	chr19	+	3478	4	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-60	-1	intron_retention	FALSE	canonical	2	5	junction_1	70.2440191206499	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTGCGTTTTTTCTT	2493	False	NA	25	True	AATGAA	-18	NA	44994936	45001200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44996568_44997718_44997960_44998570_44998999_45000022
ES.17946.25	chr19	+	5872	3	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-55	0	intron_retention	FALSE	non_canonical	0	0	junction_1	90	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2498	False	NA	26	True	AATGAA	-19	NA	44994941	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44997973_44998182_44998679_44998856
ES.17946.26	chr19	+	2999	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-55	544	-55	-544	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTTCTTCTCTGTATA	2498	False	NA	NA	False	NA	NA	NA	44994941	45000657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.27	chr19	+	3421	6	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.49496104348	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGCGTTTTTTCT	2498	False	NA	24	True	AATGAA	-17	NA	44994941	45001199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44996568_44996687_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.28	chr19	+	1474	4	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-49	-1459	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	78.7922726047562	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGTTTTACCTGCATG	2504	False	NA	NA	False	AATAAA	-16	NA	44994947	44999742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44995187_44997718_44997960_44998570_44998679_44998856
ES.17946.29	chr19	+	6039	2	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-44	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTGCGTTTTTTCTT	2509	False	NA	25	True	AATGAA	-18	NA	44994952	45001200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44997980_44998188
ES.17946.3	chr19	+	3815	18	Fusion	ENSMUSG00000025209.6_ENSMUSG00000025207.17	novel	4548	15	NA	NA	13	0	multi-exon	FALSE	canonical	0	0	junction_14	58.4615332081866	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	NA	False	NA	26	True	AATGAA	-19	NA	44977712	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.30	chr19	+	3284	5	NNC	ENSMUSG00000025209.6	novel	3488	5	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	69.0954955116468	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2510	False	NA	26	True	AATGAA	-19	NA	44994953	45001201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44996568_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.31	chr19	+	2856	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	-18	650	-18	-650	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGGCTGTTTCCAAAG	2535	False	NA	NA	False	NA	NA	NA	44994978	45000551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ES.17946.4	chr19	+	4119	16	NNC	ENSMUSG00000025207.17	novel	4548	15	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_2	3.94067112163511	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGAGTGTCTGCTTGG	NA	False	NA	3	True	AATAAA	-17	NA	44977718	44991835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44977797_44980576_44980701_44980949_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ES.17946.5	chr19	+	4081	16	NNC	ENSMUSG00000025207.17	novel	4548	15	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	3.94067112163511	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	False	NA	1	True	AATAAA	-15	NA	44977718	44991833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_44977797_44980576_44980701_44980985_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ES.17946.6	chr19	+	4430	14	NIC	ENSMUSG00000025207.17	novel	4548	15	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_7	2.89459811111181	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	False	NA	4	True	AATAAA	-18	NA	44977730	44991836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ES.17946.7	chr19	+	4131	14	NIC	ENSMUSG00000025207.17	novel	4548	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	3.32464350538066	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	False	NA	1	True	AATAAA	-15	NA	44977730	44991833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ES.17946.8	chr19	+	2994	13	NIC	ENSMUSG00000025207.17	novel	4548	15	NA	NA	7	2988	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	4.03801381319524	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTCCATGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	44977736	44988716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617
ES.17946.9	chr19	+	3154	14	ISM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	200	3121	10	2987	5prime_fragment	FALSE	canonical	1	6	junction_7	2.98715197522271	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCCTCCATGAATGTA	NA	False	NA	NA	False	NA	NA	NA	44977739	44988715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_44977797_44980576_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617
ES.17947.1	chr19	-	2376	2	FSM	ENSMUSG00000025208.10	ENSMUST00000235259.2	515	2	4	-1865	4	882	multi-exon	FALSE	canonical	3	515	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTGGGTAGATGGC	NA	False	NA	NA	False	NA	NA	NA	44994855	44992385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994609_44994702
ES.17947.3	chr19	-	1320	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	7	71	7	-71	multi-exon	FALSE	canonical	3	460	junction_1	27.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATCATGTGTATAAAT	NA	False	NA	NA	False	AAAAAG	-20	NA	44994874	44993338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994380_44994501_44994609_44994702
ES.17947.4	chr19	-	1344	2	FSM	ENSMUSG00000025208.10	ENSMUST00000235259.2	515	2	33	-862	33	-121	multi-exon	FALSE	canonical	3	515	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	44994826	44993388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994609_44994702
ES.17947.5	chr19	-	1018	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	24	356	2	-356	multi-exon	FALSE	canonical	3	460	junction_1	27.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAAATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	44994857	44993623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994380_44994501_44994609_44994702
ES.17947.6	chr19	-	1145	2	FSM	ENSMUSG00000025208.10	ENSMUST00000235259.2	515	2	-3	-627	-3	-356	multi-exon	FALSE	canonical	3	515	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAAATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	44994862	44993623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994609_44994702
ES.17947.7	chr19	-	815	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	-10	593	-10	390	multi-exon	FALSE	canonical	3	460	junction_1	27.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGAGTCTGGAGGCTGT	NA	False	NA	-2	True	AAAACA	-3	NA	44994891	44993860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994380_44994501_44994609_44994702
ES.17947.8	chr19	-	539	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	12	847	-10	136	multi-exon	FALSE	canonical	3	460	junction_1	27.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATAGGATTGGTTCC	NA	False	NA	NA	False	AGTAAA	-23	NA	44994869	44994114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_44994380_44994501_44994609_44994702
ES.17948.1	chr19	-	3119	1	Antisense	novelGene_ENSMUSG00000025209.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGGGCTCTGAGGGTC	5315	False	NA	NA	False	NA	NA	NA	45001102	44997983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_44998000_45001100
ES.17949.1	chr19	+	2935	6	NIC	ENSMUSG00000035342.15	novel	2798	5	NA	NA	-22	7	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	66.3487754220076	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCTTGCTGGCTGCT	841	False	NA	NA	False	GATAAA	-30	NA	45002892	45015557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45002985_45003600_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.10	chr19	+	6531	5	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-715	-27	intron_retention	FALSE	non_canonical	0	0	junction_1	64.1443684199946	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	209	False	NA	NA	False	TTTAAA	-9	NA	45005879	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006275_45006337_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.11	chr19	+	3392	6	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-708	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.2506540048294	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTTGACATCCATC	216	False	NA	NA	False	GATAAA	-13	NA	45005886	45015540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006272_45006336_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.12	chr19	+	3221	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	-565	38	-509	34	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	415	False	NA	NA	False	NA	NA	NA	45006085	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.13	chr19	+	3085	6	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-425	-27	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59.2506540048294	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	499	False	NA	NA	False	TTTAAA	-9	NA	45006169	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006295_45006357_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.14	chr19	+	2693	6	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-63	34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	73.4694494330807	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	32	False	NA	NA	False	NA	NA	NA	45006531	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006670_45010044_45010276_45010572_45010710_45011980_45012644_45013157_45013419_45014240
ES.17949.15	chr19	+	1634	3	NIC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-35	34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	60	False	NA	NA	False	NA	NA	NA	45006559	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45006670_45013157_45013419_45014240
ES.17949.17	chr19	+	2519	5	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	59.4784624885345	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTGACATCCATCT	107	False	NA	NA	False	GATAAA	-14	NA	45006606	45015541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006670_45010044_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.18	chr19	+	2354	5	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	17	34	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	58.9931140049413	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	112	False	NA	NA	False	NA	NA	NA	45006611	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006670_45009825_45010276_45011980_45012303_45013157_45013419_45014240
ES.17949.2	chr19	+	3005	6	NNC	ENSMUSG00000035342.15	novel	3062	5	NA	NA	-99	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	61.4459111739748	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGACATCCATCTCT	1153	False	NA	NA	False	GATAAA	-16	NA	45003204	45015543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45003393_45003622_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.20	chr19	+	2114	5	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	-15	34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	71.5995810043606	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	-10	True	NA	NA	False	NA	NA	NA	45006635	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45006670_45010041_45010276_45011980_45012303_45013157_45013419_45014240
ES.17949.21	chr19	+	4113	5	NNC	ENSMUSG00000035342.15	novel	3062	5	NA	NA	1802	0	intron_retention	FALSE	canonical	1	1	junction_2	76.4374744480742	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	1807	False	NA	NA	False	NA	NA	NA	45008452	45015469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45010276_45010572_45010710_45011980_45012644_45013157_45013419_45014240
ES.17949.22	chr19	+	2644	5	NNC	ENSMUSG00000035342.15	novel	348	3	NA	NA	2403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1443684199946	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTGACATCCATCT	2408	False	NA	NA	False	GATAAA	-14	NA	45009053	45015541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45009242_45010044_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.3	chr19	+	3008	6	NIC	ENSMUSG00000035342.15	novel	3062	5	NA	NA	-80	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	61.4459111739748	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGACATCCATCTCT	1172	False	NA	NA	False	GATAAA	-16	NA	45003223	45015543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45003393_45003600_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.4	chr19	+	3005	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	102	-45	102	-27	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1354	False	NA	NA	False	TTTAAA	-9	NA	45003405	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.5	chr19	+	2328	4	NIC	ENSMUSG00000035342.15	novel	2798	5	NA	NA	-16	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	73.0889868584864	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1571	False	NA	NA	False	TTTAAA	-9	NA	45003622	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45003753_45011980_45012644_45013157_45013419_45014240
ES.17949.6	chr19	+	2547	5	NNC	ENSMUSG00000035342.15	novel	2798	5	NA	NA	-15	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1443684199946	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCAATGG	1572	False	NA	NA	False	NA	NA	NA	45003623	45015503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45003753_45010044_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.7	chr19	+	3282	5	NNC	ENSMUSG00000035342.15	novel	2798	5	NA	NA	-10	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.1443684199946	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1577	False	NA	NA	False	TTTAAA	-9	NA	45003628	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45004263_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.8	chr19	+	2551	5	NNC	ENSMUSG00000035342.15	novel	3062	5	NA	NA	2	-27	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	62.8704024163994	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAATGGATAAAGAAACT	1589	False	NA	NA	False	TTTAAA	-9	NA	45003640	45015514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45003763_45010044_45010276_45011980_45012644_45013157_45013419_45014240
ES.17949.9	chr19	+	4412	4	NIC	ENSMUSG00000035342.15	novel	3062	5	NA	NA	20	0	intron_retention	FALSE	canonical	3	54	junction_1	47.7702836499847	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	1607	False	NA	NA	False	NA	NA	NA	45003658	45015469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45003763_45009825_45012644_45013157_45013419_45014240
ES.1795.1	chr1	-	5598	1	Genic_Genomic	ENSMUSG00000026565.19	novel	NA	NA	NA	NA	9417	8	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTCTGTGAGGTC	9781	False	NA	-1	True	ATTAAA	-25	NA	165698312	165692714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_165692700_165698300
ES.17950.1	chr19	-	174	1	Intergenic	novelGene_14884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	45011783	45011609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45011600_45011800
ES.17951.1	chr19	-	1471	1	Antisense	novelGene_ENSMUSG00000035342.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45015214	45013743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_45013700_45015200
ES.17952.1	chr19	-	4591	16	NNC	ENSMUSG00000074818.14	novel	3265	16	NA	NA	-923	0	intron_retention	FALSE	canonical	3	10	junction_5	4.01331118487798	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTCTGACTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	45035079	45015344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
ES.17952.10	chr19	-	4080	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-869	-3	intron_retention	FALSE	canonical	0	0	junction_16	6.52369479283021	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTTTGGTCTGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	45035025	45015347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45034991
ES.17952.11	chr19	-	4153	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-884	-5	intron_retention	FALSE	canonical	0	0	junction_10	6.54670718758675	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTTCCTTTGGTCTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	45035040	45015349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025648_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
ES.17952.2	chr19	-	3972	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-887	0	intron_retention	TRUE	canonical	0	0	junction_16	6.52369479283021	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTCTGACTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	45035043	45015344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034250_45035013
ES.17952.3	chr19	-	3295	4	NIC	ENSMUSG00000074818.14	novel	2975	14	NA	NA	-1212	-1	intron_retention	FALSE	canonical	2	3	junction_2	5.71547606649408	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45019666	45015345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45016919_45017162_45017763_45018418_45018511_45018636
ES.17952.4	chr19	-	4006	16	NNC	ENSMUSG00000074818.14	novel	3265	16	NA	NA	-887	-1	intron_retention	FALSE	canonical	2	3	junction_3	6.29779502859709	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45035043	45015345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
ES.17952.5	chr19	-	3943	17	NNC	ENSMUSG00000074818.14	novel	2981	17	NA	NA	-921	-1	intron_retention	FALSE	canonical	0	0	junction_9	5.94736023375077	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTGGTCTGACTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45035077	45015345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025338_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
ES.17952.6	chr19	-	2415	5	NIC	ENSMUSG00000074818.14	novel	2975	14	NA	NA	-261	-2	intron_retention	FALSE	canonical	3	10	junction_4	3.11247489949718	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTTGGTCTGACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	45018715	45015346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636
ES.17952.7	chr19	-	3936	16	NNC	ENSMUSG00000074818.14	novel	3265	16	NA	NA	-887	-2	intron_retention	FALSE	canonical	0	0	junction_14	5.96284793999944	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTTGGTCTGACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	45035043	45015346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45033856_45034357_45035013
ES.17952.8	chr19	-	4961	15	NNC	ENSMUSG00000074818.14	novel	3265	16	NA	NA	-886	-2	intron_retention	FALSE	canonical	0	0	junction_13	6.08821209638858	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTTGGTCTGACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	45035042	45015346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029136_45033856_45034357_45035013
ES.17952.9	chr19	-	4110	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-921	-3	intron_retention	FALSE	canonical	2	6	junction_9	4.93987284755387	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTTTGGTCTGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	45035077	45015347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
ES.17953.1	chr19	+	2997	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	-116	-14	-18	13	multi-exon	TRUE	canonical	3	75	junction_2	13.7767920794356	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCACATCCCACTTGTC	NA	False	NA	21	True	AATAAA	-32	NA	45035996	45044835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.2	chr19	+	2679	11	NIC	ENSMUSG00000025212.18	novel	2867	10	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.2248351431004	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATCTTCAGTTATTC	NA	False	NA	6	True	AATAAA	-17	NA	45036003	45044820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45036034_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.4	chr19	+	3083	9	NIC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	40	-1	intron_retention	FALSE	canonical	3	6	junction_1	33.0747260003768	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATCTTCAGTTATTC	NA	False	NA	6	True	AATAAA	-17	NA	45036054	45044820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45036330_45038182_45038354_45038666_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.5	chr19	+	2754	11	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.2653064451587	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCGTCTCTTTCTTA	NA	False	NA	7	True	NA	NA	NA	45036055	45044528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45036330_45037542_45037802_45038154_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.7	chr19	+	2773	11	NNC	ENSMUSG00000025212.18	novel	2867	11	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.2653064451587	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGATCTTCAGTTATT	NA	False	NA	5	True	AATAAA	-16	NA	45036232	45044819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45036330_45037542_45037707_45038154_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.8	chr19	+	2440	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	137	290	7	6	multi-exon	FALSE	canonical	3	75	junction_2	13.7767920794356	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGTCTCTTTCTTAAGA	NA	False	NA	10	True	NA	NA	NA	45036249	45044531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17953.9	chr19	+	2687	11	NIC	ENSMUSG00000025212.18	novel	530	6	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.2248351431004	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	False	NA	8	True	AATAAA	-19	NA	45036332	45044822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45036369_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ES.17954.1	chr19	-	221	1	Intergenic	novelGene_14885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTTGTTTCTTCAGAA	6711	False	NA	NA	False	NA	NA	NA	45051609	45051388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45051400_45051600
ES.17955.1	chr19	+	164	1	Intergenic	novelGene_14886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTAATGCTGTTTTCC	668	False	NA	NA	False	NA	NA	NA	45056387	45056551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45056400_45056600
ES.17956.1	chr19	+	2262	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	-901	19	-3	-19	multi-exon	FALSE	canonical	1	1	junction_1	1.6583123951777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATATAAACAAACCGAG	4954	False	NA	NA	False	AATAAA	-2	NA	45063676	45067709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
ES.17956.2	chr19	+	2328	1	NIC	ENSMUSG00000025213.12	novel	1625	6	NA	NA	797	-26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATATAAACA	6652	False	NA	NA	False	NA	NA	NA	45065374	45067702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45065400_45067700
ES.17957.1	chr19	+	136	1	Intergenic	novelGene_14887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAATAAA	664	False	NA	NA	False	NA	NA	NA	45087707	45087843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45087700_45087800
ES.17958.1	chr19	-	180	1	Intergenic	novelGene_14888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTGCTTAGTCCAA	NA	False	NA	NA	False	NA	NA	NA	45126290	45126110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45126100_45126300
ES.17959.1	chr19	+	2058	3	FSM	ENSMUSG00000025215.11	ENSMUST00000026236.11	2065	3	6	1	6	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGGGCTGTCTCCTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	45139124	45145381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45139932_45141954_45142157_45144332
ES.17959.2	chr19	+	1916	3	NNC	ENSMUSG00000025215.11	novel	2065	3	NA	NA	184	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGGGCTGTCTCCTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	45139302	45145381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45139932_45141918_45142157_45144332
ES.1796.1	chr1	+	6101	5	Genic_Genomic	ENSMUSG00000005763.16	novel	822	4	NA	NA	7297	8806	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTATTTTCTGAAATTTT	9759	False	NA	NA	False	NA	NA	NA	165699520	165713652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_165703618_165704545_165704637_165707699_165708041_165710611_165710688_165712156
ES.1796.2	chr1	+	8339	1	Antisense	novelGene_ENSMUSG00000026565.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCCCT	NA	False	NA	NA	False	NA	NA	NA	165705298	165713637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165705300_165713600
ES.17960.1	chr19	-	182	1	Intergenic	novelGene_14889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGGGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	45185157	45184975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45185000_45185200
ES.17961.1	chr19	-	2793	1	NIC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	332	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGACCGCGATCGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	45223919	45221126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45221100_45223900
ES.17961.2	chr19	-	2518	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1030	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAATGGACCGCGATCG	NA	False	NA	NA	False	AATAAA	-15	NA	45225281	45221129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45222697_45223341_45224081_45225069
ES.17961.3	chr19	-	1822	3	NNC	ENSMUSG00000025216.10	novel	2484	2	NA	NA	-1082	-755	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGATTATTTTCTTTCT	NA	False	NA	NA	False	TATAAA	-35	NA	45225333	45221877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45222697_45223341_45224081_45225069
ES.17962.1	chr19	+	165	1	Intergenic	novelGene_14890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAGAAAAAAAAA	8265	False	NA	NA	False	NA	NA	NA	45243872	45244037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45243900_45244000
ES.17963.1	chr19	+	177	1	Intergenic	novelGene_14891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	45248410	45248587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45248400_45248600
ES.17964.1	chr19	+	216	1	Intergenic	novelGene_14892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAACAGTCACGGAAAA	NA	False	NA	NA	False	AAGAAA	-20	NA	45261939	45262155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45261900_45262200
ES.17965.1	chr19	+	178	1	Intergenic	novelGene_14893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	45276667	45276845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45276700_45276800
ES.17966.1	chr19	+	155	1	Intergenic	novelGene_14894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	45293632	45293787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45293600_45293800
ES.17967.1	chr19	-	178	1	Intergenic	novelGene_14895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	45297970	45297792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45297800_45298000
ES.17968.1	chr19	+	173	1	Antisense	novelGene_ENSMUSG00000100417.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATATCAGGTGATA	NA	False	NA	NA	False	NA	NA	NA	45322322	45322495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45322300_45322500
ES.17969.1	chr19	-	175	1	ISM	ENSMUSG00000100417.3	ENSMUST00000187727.2	2698	2	2436	229	2434	-227	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGAATACTATT	NA	False	NA	NA	False	NA	NA	NA	45324312	45324137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_45324100_45324300
ES.1797.1	chr1	-	2683	17	FSM	ENSMUSG00000026565.19	ENSMUST00000160260.9	13022	17	47	10292	-2	11	multi-exon	FALSE	canonical	2	8	junction_3	5.36153837531729	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGACAGACAAAACTAAGTG	9692	False	NA	33	True	NA	NA	NA	165830200	165703014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ES.1797.2	chr1	-	2782	18	NIC	ENSMUSG00000026565.19	novel	13022	17	NA	NA	0	11	intron_retention	FALSE	canonical	0	0	junction_17	7.77272313372185	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGACAGACAAAACTAAGTG	9694	False	NA	33	True	NA	NA	NA	165830198	165703014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165773470_165773572_165830130
ES.1797.3	chr1	-	2655	17	NIC	ENSMUSG00000026565.19	novel	13022	17	NA	NA	0	12	intron_retention	FALSE	canonical	0	0	junction_15	7.55397246486906	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	9694	False	NA	3	True	NA	NA	NA	165830198	165703044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165780349_165780426_165830130
ES.1797.4	chr1	-	2558	16	FSM	ENSMUSG00000026565.19	ENSMUST00000160908.8	2591	16	5	28	1	3	multi-exon	FALSE	canonical	3	10	junction_7	5.03940031705713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTTTAAAAGAAAAAA	9706	False	NA	-6	True	AAAACA	-45	NA	165830186	165703053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ES.1797.5	chr1	-	5642	13	FSM	ENSMUSG00000026565.19	ENSMUST00000177472.2	2335	13	-2	-3305	1	3305	multi-exon	FALSE	canonical	3	10	junction_4	3.77123616632825	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAATAAAATGAAGGCAG	9706	False	NA	NA	False	NA	NA	NA	165830186	165715295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ES.1797.6	chr1	-	8099	1	Genic_Genomic	ENSMUSG00000026565.19	novel	NA	NA	NA	NA	3316	6171	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAGAAG	7469	False	NA	NA	False	NA	NA	NA	165759153	165751054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_165751100_165759200
ES.17970.1	chr19	+	236	1	Intergenic	novelGene_14896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCGGCCTGGTCTACA	NA	False	NA	NA	False	AAGAAA	-28	NA	45348575	45348811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45348600_45348800
ES.17971.1	chr19	+	2327	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	-65	716	-48	4	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352124	45517736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.10	chr19	+	2171	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-100	-7	-1	3	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTTGCTTTGCCGTT	NA	False	NA	20	True	TATAAA	-22	NA	45352171	45517735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.11	chr19	+	2089	13	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_1	165.14917499037	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352172	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.12	chr19	+	1952	13	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	1	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	206.310378367697	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATTTAGTGTTTTGC	NA	False	NA	-4	True	NA	NA	NA	45352173	45517711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45517411
ES.17971.13	chr19	+	2197	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352174	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.14	chr19	+	5006	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	-11	-2017	6	2017	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGACATCGAGGCTC	NA	False	NA	NA	False	AATAAA	-30	NA	45352178	45520469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.15	chr19	+	6196	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	6	3285	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGTAAATTACAAA	NA	False	NA	NA	False	NA	NA	NA	45352178	45521737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.16	chr19	+	10041	15	NIC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	157	junction_2	154.725893246141	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352191	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45515896_45517411
ES.17971.17	chr19	+	6293	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	2	-3317	1	3317	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAATTTTCTAAGTGTCTT	NA	False	NA	NA	False	ATTAAA	-1	NA	45352191	45521769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.18	chr19	+	2168	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	187.332915692291	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352191	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45411571_45411680_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.19	chr19	+	864	5	ISM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-80	21276	1	277	5prime_fragment	FALSE	canonical	3	132	junction_1	207.468069832444	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTAGCTTTTCTTCT	NA	False	NA	NA	False	AATATA	-18	NA	45352191	45496452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122
ES.17971.2	chr19	+	2176	14	NNC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_13	184.009840230829	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352147	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.21	chr19	+	2126	5	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	1	15769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.098777823017	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACGTCGGCAAGAGT	NA	False	NA	NA	False	AATAAA	-10	NA	45352191	45464837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45463055
ES.17971.22	chr19	+	3417	6	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	2	16953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.117742769294	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATAAAGCCACTCCGC	NA	False	NA	NA	False	AATAAA	-10	NA	45352192	45466021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45463055
ES.17971.23	chr19	+	2170	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	200.35734657489	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352193	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.24	chr19	+	2280	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_15	188.405661627599	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352193	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.25	chr19	+	2849	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	-59	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGCGAGGCTTGGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45352193	45518393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.26	chr19	+	3683	13	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	4	intron_retention	FALSE	canonical	0	0	junction_9	193.084807935673	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45352193	45517736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45505453_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.27	chr19	+	2509	17	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	266.483399752686	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352194	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45360369_45360554_45411571_45411680_45425770_45425843_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.28	chr19	+	1092	8	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	217.924251958878	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATCTCTCTTGCTT	NA	False	NA	13	True	TATAAA	-15	NA	45352194	45517728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501113_45517491
ES.17971.29	chr19	+	2142	14	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	216.921303866185	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAATCTCTCTTGCTTTG	NA	False	NA	15	True	TATAAA	-17	NA	45352195	45517730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.3	chr19	+	2203	14	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_2	203.151006300601	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352148	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.30	chr19	+	2206	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	204.389596464343	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352195	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.31	chr19	+	2234	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_14	167.763803836081	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.32	chr19	+	2052	13	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	204.964275342477	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATCTCTCTTGCTTTGC	NA	False	NA	16	True	TATAAA	-18	NA	45352196	45517731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.33	chr19	+	2203	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	15	2	combination_of_known_splicesites	FALSE	canonical	3	92	junction_3	189.441835885513	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352210	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.34	chr19	+	2303	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.100038741667	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTCTCTTGCTTTGCCG	NA	False	NA	18	True	TATAAA	-20	NA	45352214	45517733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45380155_45380225_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.35	chr19	+	2994	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCTCTGTGGCTCGAA	NA	False	NA	NA	False	NA	NA	NA	45352215	45518452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.36	chr19	+	6195	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	25	3320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	272.665901567378	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTAAGTGTCTTCTC	NA	False	NA	NA	False	ATTAAA	-4	NA	45352220	45521772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45369975_45370157_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.37	chr19	+	2195	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.997190332605	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAATCTCTCTTGCTTT	NA	False	NA	14	True	TATAAA	-16	NA	45352236	45517729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45422335_45422431_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.38	chr19	+	2312	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.223827222884	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAATCTCTCTTGCTTTG	NA	False	NA	15	True	TATAAA	-17	NA	45352239	45517730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444907_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.39	chr19	+	2209	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-10	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	237.338483090197	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352239	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45391225_45391291_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.4	chr19	+	2233	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352148	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.40	chr19	+	2847	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-9	-62	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_14	167.763803836081	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTGGCGAGGCTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	45352240	45518390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.41	chr19	+	2048	14	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	2	23	junction_2	181.690581637082	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352257	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.42	chr19	+	1907	15	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	9	-1965	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	204.411599575015	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACATTACAAGTCC	NA	False	NA	NA	False	AATAAA	-21	NA	45352258	45508711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45508521
ES.17971.43	chr19	+	2415	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	185.44843609203	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352259	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491830_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.44	chr19	+	1862	14	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-10	-1965	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	188.135164806281	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACATTACAAGTCC	NA	False	NA	NA	False	AATAAA	-21	NA	45352261	45508711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45508521
ES.17971.45	chr19	+	2268	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	214.941377020702	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352263	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45358674_45358757_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.46	chr19	+	2130	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_3	216.767356247877	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352263	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.47	chr19	+	2225	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.100038741667	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352269	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45356840_45356888_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.48	chr19	+	2244	14	NNC	ENSMUSG00000025217.16	novel	361	4	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	206.613895406742	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352465	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352714_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.49	chr19	+	2280	15	NNC	ENSMUSG00000025217.16	novel	338	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	254.353452053296	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352521	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352714_45394983_45395026_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515898_45517411
ES.17971.5	chr19	+	2361	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	221.802574877349	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352150	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45482961_45483026_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.50	chr19	+	2054	14	NIC	ENSMUSG00000025217.16	novel	361	4	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	166.945691484762	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATCTCTCTTGCTT	NA	False	NA	13	True	TATAAA	-15	NA	45352537	45517728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352582_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.51	chr19	+	2290	15	NIC	ENSMUSG00000025217.16	novel	361	4	NA	NA	19	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	170.829264925838	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATCTCTCTTGCTTTGC	NA	False	NA	16	True	TATAAA	-18	NA	45352544	45517731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352714_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.52	chr19	+	2272	15	NNC	ENSMUSG00000025217.16	novel	361	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	206.107523454361	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352545	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352714_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17971.53	chr19	+	2960	15	NIC	ENSMUSG00000025217.16	novel	338	3	NA	NA	69	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	170.829264925838	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGCTCTGTGGCTCGA	NA	False	NA	NA	False	NA	NA	NA	45352594	45518451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352714_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.54	chr19	+	2236	16	NIC	ENSMUSG00000025217.16	novel	338	3	NA	NA	116	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	191.658028790865	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352641	45517732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352714_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.55	chr19	+	135	1	Intergenic	novelGene_14898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45362447	45362582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45362400_45362600
ES.17971.56	chr19	+	210	1	Intergenic	novelGene_14900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAGAACGTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	45384785	45384995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45384800_45385000
ES.17971.57	chr19	+	4992	1	Intergenic	novelGene_14901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAATCATATCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	45398894	45403886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45398900_45403900
ES.17971.58	chr19	+	4117	2	Intergenic	novelGene_14902	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAATCATATCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	45399416	45403886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45401443_45401795
ES.17971.59	chr19	+	142	1	Intergenic	novelGene_14904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	45406572	45406714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45406600_45406700
ES.17971.6	chr19	+	2946	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	-37	69	-20	-69	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTTAAATCACTGGCGA	NA	False	NA	NA	False	AATAAA	-13	NA	45352152	45518383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.60	chr19	+	175	1	Intergenic	novelGene_14905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTGACTATAGACAA	NA	False	NA	NA	False	NA	NA	NA	45455996	45456171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45456000_45456200
ES.17971.62	chr19	+	1426	9	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	67136	2	67136	2	3prime_fragment	FALSE	canonical	3	588	junction_3	33.629414208398	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAATCTCTCTTGCTTTG	NA	False	NA	15	True	TATAAA	-17	NA	45501082	45517730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.63	chr19	+	1334	8	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	67877	-2	67877	2	3prime_fragment	FALSE	canonical	3	588	junction_2	35.9000881131316	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45501823	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.64	chr19	+	4876	3	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	75531	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	295	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45509477	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45512341_45514205_45515896_45517411
ES.17971.65	chr19	+	4227	3	NNC	ENSMUSG00000025217.16	novel	4502	14	NA	NA	76157	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	295	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTGCTTTGCCGTTA	NA	False	NA	21	True	TATAAA	-23	NA	45510103	45517736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45512285_45514174_45515896_45517411
ES.17971.7	chr19	+	6219	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	-109	-4046	-10	3322	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGTGTCTTCTCTC	NA	False	NA	NA	False	ATTAAA	-6	NA	45352162	45521774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.8	chr19	+	2329	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTTGCTTTGCCGT	NA	False	NA	19	True	TATAAA	-21	NA	45352162	45517734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ES.17971.9	chr19	+	4797	13	NNC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	-1	2017	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	235.028884158711	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGACATCGAGGCTC	NA	False	NA	NA	False	AATAAA	-30	NA	45352171	45520469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45352326_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
ES.17972.1	chr19	-	165	1	Intergenic	novelGene_14897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTAAACTTGG	NA	False	NA	NA	False	NA	NA	NA	45359265	45359100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45359100_45359300
ES.17973.1	chr19	-	3664	2	Antisense	novelGene_ENSMUSG00000025217.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTACAGAGAAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	45378742	45374724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_45376290_45376643
ES.17973.2	chr19	-	158	1	Intergenic	novelGene_14899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	45376504	45376346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45376300_45376500
ES.17974.1	chr19	-	2132	1	Intergenic	novelGene_14903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAGAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45404493	45402361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45402400_45404500
ES.17975.1	chr19	+	1387	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	-40	6	-40	-6	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACAATGGTAGCAT	3652	False	NA	NA	False	ATTAAA	-13	NA	45549013	45566720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17975.10	chr19	+	1426	7	FSM	ENSMUSG00000041035.10	ENSMUST00000235805.2	687	7	-1	-738	-1	-6	multi-exon	FALSE	canonical	2	7	junction_1	211.143447815829	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACAATGGTAGCAT	3711	False	NA	NA	False	ATTAAA	-13	NA	45549072	45566720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45549147_45549425_45549524_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17975.11	chr19	+	1175	5	ISM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	19	534	-1	210	intron_retention	FALSE	canonical	3	416	junction_3	22.8254244210267	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACTGACTGCCCCTT	3711	False	NA	12	True	AGTAAA	-19	NA	45549072	45566192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431
ES.17975.12	chr19	+	1246	5	NIC	ENSMUSG00000041035.10	novel	687	7	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	194.421417287294	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACAATGGTAGCAT	3712	False	NA	NA	False	ATTAAA	-13	NA	45549073	45566720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45549147_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17975.13	chr19	+	1164	5	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	1	212	intron_retention	FALSE	canonical	3	68	junction_3	171.224998174916	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTGACTGCCCCTTTC	3713	False	NA	14	True	AGTAAA	-21	NA	45549074	45566194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431
ES.17975.14	chr19	+	5648	4	ISM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	24	510	4	234	intron_retention	FALSE	canonical	3	416	junction_3	26.2805377925694	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGTGTATTGCCCGC	3716	False	NA	36	True	AGTAAA	-43	NA	45549077	45566216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843
ES.17975.15	chr19	+	6567	4	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	3406	-6	intron_retention	FALSE	canonical	3	68	junction_2	193.050943190306	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACAATGGTAGCAT	7118	False	NA	NA	False	ATTAAA	-13	NA	45552479	45566720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45553431_45560323_45560438_45560843_45565535_45565909
ES.17975.2	chr19	+	875	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	-31	509	-31	235	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTGTATTGCCCGCT	3661	False	NA	37	True	AGTAAA	-44	NA	45549022	45566217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17975.3	chr19	+	861	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-29	234	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGTGTATTGCCCGC	3663	False	NA	36	True	AGTAAA	-43	NA	45549024	45566216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
ES.17975.4	chr19	+	1366	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTAGCATGTTTCCC	3669	False	NA	NA	False	ATTAAA	-20	NA	45549030	45566727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
ES.17975.5	chr19	+	5813	5	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	68	junction_3	174.20013633749	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGGTAGCATGTTTC	3674	False	NA	NA	False	ATTAAA	-18	NA	45549035	45566725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45565535_45565909
ES.17975.6	chr19	+	820	6	NNC	ENSMUSG00000041035.10	novel	1353	6	NA	NA	-9	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.886921775313	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGGACTGACTGCCCCT	3683	False	NA	11	True	AGTAAA	-18	NA	45549044	45566191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45553356_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17975.7	chr19	+	5899	6	NIC	ENSMUSG00000041035.10	novel	687	7	NA	NA	1	-5	intron_retention	FALSE	canonical	2	7	junction_1	219.905979909597	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACAATGGTAGCATG	3693	False	NA	NA	False	ATTAAA	-14	NA	45549054	45566721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45549147_45549425_45549524_45553349_45553431_45560323_45560449_45560843_45565535_45565909
ES.17975.8	chr19	+	1358	4	NNC	ENSMUSG00000041035.10	novel	687	7	NA	NA	-9	-10161	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.31245915016974	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTACCCTCCCGGGGCT	3703	False	NA	NA	False	AATAAA	-19	NA	45549064	45555789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_45549147_45549425_45549524_45553349_45553431_45554692
ES.17975.9	chr19	+	967	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	13	373	-7	-130	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTGTGTGCTGGCTTG	3705	False	NA	NA	False	NA	NA	NA	45549066	45566353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ES.17976.1	chr19	+	201	1	Intergenic	novelGene_14907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGAGCATCCTACCCC	2390	False	NA	NA	False	AAAAAG	-5	NA	45577541	45577742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45577500_45577700
ES.17977.1	chr19	+	207	1	Intergenic	novelGene_14908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCATCTAGATTTC	NA	False	NA	NA	False	NA	NA	NA	45597715	45597922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45597700_45597900
ES.17978.1	chr19	-	2744	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.4656631564937	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	2	True	AATAAA	-19	NA	45548948	45540713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45541763_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548635
ES.17978.10	chr19	-	3252	7	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	17	-5	intron_retention	FALSE	canonical	0	0	junction_4	24.1223732018408	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATTGCCTGCTGTCTGT	NA	False	NA	-3	True	AATAAA	-14	NA	45548953	45540718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45541610_45541947_45542117_45543529_45544535_45546153_45546855_45547038_45547359_45548018_45548156_45548924
ES.17978.2	chr19	-	3387	7	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	33	junction_6	11.8988794990677	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	2	True	AATAAA	-19	NA	45548993	45540713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ES.17978.4	chr19	-	2349	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	-28	3	-28	-3	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548998	45540716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ES.17978.5	chr19	-	2505	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2113829314077	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45549001	45540716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45541763_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ES.17978.6	chr19	-	3154	7	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	17	-3	intron_retention	FALSE	canonical	1	1	junction_6	22.9885237068895	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548953	45540716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45542117_45543529_45543659_45544360_45544535_45546153_45546855_45547063_45547359_45548018_45548156_45548635
ES.17978.7	chr19	-	2397	9	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.1763429326218	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45549019	45540716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45541610_45541947_45542117_45543529_45543659_45544333_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ES.17978.8	chr19	-	3046	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	-23	-3	intron_retention	FALSE	canonical	3	33	junction_7	12.7775312999988	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGCTGTCTGTGA	NA	False	NA	-1	True	AATAAA	-16	NA	45548993	45540716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45541610_45541947_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ES.17978.9	chr19	-	2930	6	NNC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	1701	-5	intron_retention	FALSE	canonical	0	0	junction_3	24.5226425982193	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATTGCCTGCTGTCTGT	NA	False	NA	-3	True	AATAAA	-14	NA	45547269	45540718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45542117_45543529_45544535_45546153_45546273_45546429_45546472_45546694_45546855_45547063
ES.17979.1	chr19	-	215	1	Intergenic	novelGene_14906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGACCTTAGAAACAACA	NA	False	NA	NA	False	AAAAAG	-5	NA	45549936	45549721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45549700_45549900
ES.1798.1	chr1	+	3011	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATGAAATGAAGGGAA	328	False	NA	NA	False	NA	NA	NA	165841389	165844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165841400_165844400
ES.17980.1	chr19	-	3176	9	NNC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-1258	4	intron_retention	FALSE	canonical	0	0	junction_4	34.6876689185076	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGGTGGTTAGGTCA	639	False	NA	-1	True	AATAAA	-22	NA	45630500	45566688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45614954_45615056_45619303_45619399_45624173_45624307_45624701_45624888_45628864
ES.17980.10	chr19	-	5529	7	NNC	ENSMUSG00000040913.12	novel	630	5	NA	NA	-171	4187	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.6521704868604	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGGCACAAGACAACTG	NA	False	NA	NA	False	NA	NA	NA	45648922	45575712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45577536_45577745_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
ES.17980.11	chr19	-	239	1	Intergenic	novelGene_14909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTGTGTTCATTAGAC	NA	False	NA	NA	False	AATACA	-35	NA	45631755	45631516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45631500_45631800
ES.17980.12	chr19	-	2926	1	Genic_Genomic	ENSMUSG00000040913.12	novel	NA	NA	NA	NA	-175	-26687	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGCTTTTCTTCTCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	45648926	45646000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_45646000_45648900
ES.17980.2	chr19	-	2297	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	-230	1	-230	-1	multi-exon	FALSE	canonical	3	63	junction_8	9.07520660921833	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTCTTTGGTGGTTA	NA	False	NA	-6	True	AATAAA	-17	NA	45648981	45566693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
ES.17980.3	chr19	-	2182	9	NNC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-165	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	26.0165211932726	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTTCTTTGGTGGTT	NA	False	NA	-7	True	AATAAA	-16	NA	45648916	45566694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624839_45628864_45628961_45648214
ES.17980.4	chr19	-	2222	9	NIC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-212	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	23.8275051148877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTCTTTGGTGGT	NA	False	NA	-8	True	AATAAA	-15	NA	45648963	45566695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45567365_45567559_45567647_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
ES.17980.5	chr19	-	1367	1	NIC	ENSMUSG00000040913.12	novel	1295	5	NA	NA	267	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTCTTTGGTGGT	NA	False	NA	-8	True	AATAAA	-15	NA	45568062	45566695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45566700_45568100
ES.17980.6	chr19	-	1770	9	NNC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-528	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.892145693492	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTCTTTGGTGGT	NA	False	NA	-8	True	AATAAA	-15	NA	45649279	45566695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45649037
ES.17980.7	chr19	-	1697	10	NNC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-820	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.2097709851918	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTCTTTGGTGGT	NA	False	NA	-8	True	AATAAA	-15	NA	45649571	45566695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45649280_45649414_45649535
ES.17981.1	chr19	-	175	1	Intergenic	novelGene_14910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTCCCAAGA	795	False	NA	NA	False	NA	NA	NA	45659713	45659538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45659500_45659700
ES.17982.1	chr19	+	122	1	Intergenic	novelGene_14911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	45682350	45682472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45682400_45682500
ES.17983.1	chr19	+	222	1	Intergenic	novelGene_14912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCCACCTCCAAATC	NA	False	NA	NA	False	NA	NA	NA	45709831	45710053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45709800_45710100
ES.17984.1	chr19	-	1263	6	FSM	ENSMUSG00000025219.14	ENSMUST00000026240.14	1117	6	-153	7	-112	-7	multi-exon	TRUE	canonical	1	1	junction_2	0.8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCACTGGCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	45731466	45725243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45725720_45726556_45726664_45729937_45730119_45730349_45730437_45730954_45730992_45731091
ES.17985.1	chr19	-	881	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	5	2	5	-2	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGTGTGGCTTTTTC	4892	False	NA	-2	True	AATAAA	-25	NA	45738025	45736174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ES.17985.3	chr19	-	776	7	NNC	ENSMUSG00000056209.8	novel	888	6	NA	NA	-14	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.182611043811	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTTGCAATCCTTGT	4915	False	NA	-13	True	AATAAA	-14	NA	45738002	45736185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45736382_45736452_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ES.17985.4	chr19	-	751	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	18	119	18	-119	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	4905	False	NA	-119	True	NA	NA	NA	45738012	45736291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ES.17986.1	chr19	+	175	1	Intergenic	novelGene_14914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45763210	45763385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45763200_45763400
ES.17987.1	chr19	+	2076	1	Antisense	novelGene_ENSMUSG00000025220.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAATAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	45771465	45773541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45771500_45773500
ES.17988.1	chr19	-	5061	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.310725740461	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTTTCTCTGGGTTC	5497	False	NA	-2	True	AATAAA	-23	NA	45771969	45738687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767010_45767124_45767470_45767523_45771370
ES.17988.10	chr19	-	8226	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	10	0	intron_retention	FALSE	canonical	3	653	junction_6	77.6049651262398	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5486	False	NA	-12	True	AATAAA	-13	NA	45771980	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.13	chr19	-	4610	2	ISM	ENSMUSG00000025220.9	ENSMUST00000235865.2	3315	4	2098	-4	2098	0	3prime_fragment	FALSE	canonical	3	662	junction_1	0	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	3936	False	NA	-12	True	AATAAA	-13	NA	45745633	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_45740720_45743045
ES.17988.14	chr19	-	5047	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	262.976472331652	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5512	False	NA	-12	True	AATAAA	-13	NA	45771954	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45770642_45770669_45771370
ES.17988.15	chr19	-	4659	5	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-1572	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	331.518853159213	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	266	False	NA	-12	True	AATAAA	-13	NA	45749303	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45747513_45747744
ES.17988.17	chr19	-	4961	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	201.089684530286	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5486	False	NA	-12	True	AATAAA	-13	NA	45771980	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.18	chr19	-	4923	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	219.475787506903	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5460	False	NA	-12	True	AATAAA	-13	NA	45772006	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45771370
ES.17988.19	chr19	-	5057	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	260.012273214597	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5475	False	NA	-12	True	AATAAA	-13	NA	45771991	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746529_45746787_45746874_45749542_45749655_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.2	chr19	-	6247	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	383	4	intron_retention	FALSE	canonical	3	653	junction_7	86.6972211969063	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGCTGCTTTTTCTCT	5859	False	NA	-8	True	AATAAA	-17	NA	45771607	45738693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45767124_45767470_45767523_45771370
ES.17988.21	chr19	-	4805	15	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	280.175864960068	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5801	False	NA	-12	True	AATAAA	-13	NA	45771665	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45769666_45769890_45771370
ES.17988.22	chr19	-	4121	1	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	4911	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	984	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	6749	False	NA	-14	True	AATAAA	-11	NA	45742820	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45738700_45742800
ES.17988.23	chr19	-	4729	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	318	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	202.917016426803	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5794	False	NA	-14	True	AATAAA	-11	NA	45771672	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758497_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.24	chr19	-	4741	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	199.762427257355	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5497	False	NA	-14	True	AATAAA	-11	NA	45771969	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370_45771632_45771924
ES.17988.25	chr19	-	6666	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	197.748549650532	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5485	False	NA	-14	True	AATAAA	-11	NA	45771981	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45752330_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.27	chr19	-	9782	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	-2	intron_retention	FALSE	canonical	3	653	junction_6	79.6833971852496	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5497	False	NA	-14	True	AATAAA	-11	NA	45771969	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45767124_45767470_45767523_45771370
ES.17988.28	chr19	-	5021	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.310725740461	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5497	False	NA	-14	True	AATAAA	-11	NA	45771969	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767038_45767124_45767470_45767523_45771370
ES.17988.29	chr19	-	5005	15	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	257.666094639032	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5488	False	NA	-14	True	AATAAA	-11	NA	45771978	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746739_45746874_45749542_45749648_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.3	chr19	-	5102	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	-41	-4	-41	4	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGCTGCTTTTTCTCT	5435	False	NA	-8	True	AATAAA	-17	NA	45772031	45738693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.32	chr19	-	5043	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	206.062277533328	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGTGCTGCTTT	5513	False	NA	-14	True	AATAAA	-11	NA	45771953	45738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767544_45771366
ES.17988.34	chr19	-	8694	2	NNC	ENSMUSG00000025220.9	novel	3315	4	NA	NA	292	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTGCTGTGCTGCTT	2130	False	NA	-15	True	AATAAA	-10	NA	45747439	45738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45741347_45741391
ES.17988.35	chr19	-	5176	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	262.346026270649	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTGCTGTGCTGCTT	5497	False	NA	-15	True	AATAAA	-10	NA	45771969	45738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45768386_45768530_45771370
ES.17988.36	chr19	-	5002	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	159	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	254.505371996349	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTGCTGTGCTGCTT	5635	False	NA	-15	True	AATAAA	-10	NA	45771831	45738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45752222_45752330_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.37	chr19	-	6018	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	12	1	intron_retention	FALSE	canonical	3	653	junction_6	83.7535561231003	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTGCTGTGCTGCTT	5488	False	NA	-15	True	AATAAA	-10	NA	45771978	45738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.39	chr19	-	4580	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	301	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	209.935947471643	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	5777	False	NA	-16	True	AATAAA	-9	NA	45771689	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.42	chr19	-	5168	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	253.709656583564	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	5477	False	NA	-16	True	AATAAA	-9	NA	45771989	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45752213_45752330_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.43	chr19	-	3277	6	NNC	ENSMUSG00000025220.9	novel	2045	6	NA	NA	1444	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	376.253318922239	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	NA	False	NA	-16	True	AATAAA	-9	NA	45750229	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45743329_45743463_45746343_45746537_45746787_45746874_45749542
ES.17988.45	chr19	-	4973	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	199.762427257355	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	5478	False	NA	-16	True	AATAAA	-9	NA	45771988	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370_45771480_45771557
ES.17988.46	chr19	-	4523	16	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	269.550935199021	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	5219	False	NA	-16	True	AATAAA	-9	NA	45772247	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370_45771632_45772133
ES.17988.47	chr19	-	4143	13	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-4239	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	291.553120755416	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	NA	False	NA	-16	True	AATAAA	-9	NA	45764564	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45752244_45752330_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486
ES.17988.48	chr19	-	5065	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	266.906775235599	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	5460	False	NA	-16	True	AATAAA	-9	NA	45772006	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764318_45764487_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.49	chr19	-	5518	4	NNC	ENSMUSG00000025220.9	novel	3315	4	NA	NA	1758	0	intron_retention	FALSE	non_canonical	0	0	junction_3	313.972397937568	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGCTGTGCTGCT	NA	False	NA	-16	True	AATAAA	-9	NA	45749915	45738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45747513_45747744
ES.17988.5	chr19	-	3636	6	NNC	ENSMUSG00000025220.9	novel	2045	6	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	319.062125611925	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGCTGCTTTTTCTC	NA	False	NA	-9	True	AATAAA	-16	NA	45751677	45738694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746887_45749542_45749648_45750623
ES.17988.51	chr19	-	10792	13	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	653	junction_5	76.9095337971105	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTGTGCTGTGCTGC	5460	False	NA	-17	True	AATAAA	-8	NA	45772006	45738702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45767124_45767470_45767523_45771370
ES.17988.52	chr19	-	5043	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	206.289699209631	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAATGTGTGCTGTGCTG	5475	False	NA	-18	True	AATAAA	-7	NA	45771991	45738703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746865_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.53	chr19	-	4323	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	-4	738	-4	-734	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGCACATAGTGTCT	5472	False	NA	NA	False	NA	NA	NA	45771994	45739435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.54	chr19	-	3550	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	-63	1570	-63	1	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTGGTTGCATTTCT	5413	False	NA	1	True	AATAAA	-24	NA	45772053	45740267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.56	chr19	-	8207	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	-6	intron_retention	FALSE	canonical	3	653	junction_6	79.6833971852496	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCATCCAGTGTGGTTG	5497	False	NA	-6	True	AATAAA	-17	NA	45771969	45740274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45767124_45767470_45767523_45771370
ES.17988.57	chr19	-	6491	3	NNC	ENSMUSG00000025220.9	novel	3315	4	NA	NA	-1594	-8	intron_retention	TRUE	non_canonical	0	0	junction_2	331	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCATCCAGTGTGGT	244	False	NA	-8	True	AATAAA	-15	NA	45749325	45740276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45747508_45747739
ES.17988.58	chr19	-	3609	17	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	262.346026270649	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCATCCAGTGTGGT	5488	False	NA	-8	True	AATAAA	-15	NA	45771978	45740276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45768386_45768530_45771370
ES.17988.59	chr19	-	3334	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	124	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.310725740461	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCATCCAGTGTGGT	5600	False	NA	-8	True	AATAAA	-15	NA	45771866	45740276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767045_45767124_45767470_45767523_45771370
ES.17988.60	chr19	-	7634	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	653	junction_5	74.4813228643349	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCATCCAGTGTGGT	5475	False	NA	-8	True	AATAAA	-15	NA	45771991	45740276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.61	chr19	-	6645	15	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	11	-9	intron_retention	FALSE	canonical	0	0	junction_6	206.31822310129	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGCATCCAGTGTGG	5487	False	NA	-9	True	AATAAA	-14	NA	45771979	45740277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45754060_45755828_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.62	chr19	-	2784	14	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	4879	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	221.186445757832	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGCATCCAGTGTGG	NA	False	NA	-9	True	AATAAA	-14	NA	45767111	45740277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764650_45765325_45765457_45767025
ES.17988.64	chr19	-	3321	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	5	-10	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	219.475787506903	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCATCCAGTGTG	5481	False	NA	-10	True	AATAAA	-13	NA	45771985	45740278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45771370
ES.17988.66	chr19	-	6400	15	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	303	-10	intron_retention	FALSE	canonical	2	4	junction_3	198.843749548971	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCATCCAGTGTG	5779	False	NA	-10	True	AATAAA	-13	NA	45771687	45740278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746739_45746874_45749542_45749648_45750623_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.69	chr19	-	3387	16	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	19	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.310725740461	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTCTGCATCCAGTGT	5495	False	NA	-11	True	AATAAA	-12	NA	45771971	45740279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765388_45767025_45767124_45767470_45767523_45771370
ES.17988.70	chr19	-	4049	15	ISM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	19	3315	19	-1744	5prime_fragment	FALSE	canonical	3	653	junction_6	84.2280977404785	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCAACTTCTGTTGT	5495	False	NA	NA	False	ATTAAA	-15	NA	45771971	45742012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.71	chr19	-	203	1	Intergenic	novelGene_14913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	942	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATGTAATTTTTTGAT	4801	False	NA	NA	False	NA	NA	NA	45744768	45744565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45744600_45744800
ES.17988.72	chr19	-	2679	12	ISM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	13	10749	13	6835	5prime_fragment	FALSE	canonical	3	653	junction_3	82.3011000800121	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGTTCACTGATTT	5489	False	NA	NA	False	NA	NA	NA	45771977	45749446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.73	chr19	-	1278	3	NNC	ENSMUSG00000025220.9	novel	2812	8	NA	NA	4007	4569	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	322.5	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATAACAAACTTAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	45756318	45751712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45752330_45753888_45754064_45755832
ES.17988.74	chr19	-	3264	1	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	21	-1236	mono-exon	FALSE	NA	NA	NA	NA	NA	784	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTTTGTTTCCTGCAC	5497	False	NA	NA	False	NA	NA	NA	45771969	45768705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45768700_45772000
ES.17988.8	chr19	-	9216	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	653	junction_5	74.4813228643349	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5472	False	NA	-12	True	AATAAA	-13	NA	45771994	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ES.17988.9	chr19	-	3134	9	NNC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	4068	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	269.57370861232	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	NA	False	NA	-12	True	AATAAA	-13	NA	45756257	45738697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45755916_45756033
ES.17989.1	chr19	+	174	1	Intergenic	novelGene_14915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	45776253	45776427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45776300_45776400
ES.1799.1	chr1	+	179	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAATCTCCC	6774	False	NA	NA	False	NA	NA	NA	165848449	165848628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_165848400_165848600
ES.17990.1	chr19	+	161	1	Intergenic	novelGene_14917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	45777426	45777587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45777400_45777600
ES.17991.1	chr19	-	2506	8	NNC	ENSMUSG00000025221.17	novel	517	6	NA	NA	-57	5069	intron_retention	TRUE	canonical	1	1	junction_1	10.2080400485428	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTTCTTGGTCCTGA	7827	False	NA	NA	False	NA	NA	NA	45804557	45775208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45775303_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45785626_45804169
ES.17991.10	chr19	-	267	1	Intergenic	novelGene_14919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCCCTCTGGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	45799315	45799048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45799000_45799300
ES.17991.11	chr19	-	156	1	Intergenic	novelGene_14920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	45799311	45799155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45799200_45799300
ES.17991.2	chr19	-	174	1	Intergenic	novelGene_14916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	7275	False	NA	NA	False	NA	NA	NA	45776770	45776596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45776600_45776800
ES.17991.3	chr19	-	2030	8	FSM	ENSMUSG00000025221.17	ENSMUST00000086993.11	1005	8	-22	-1003	-22	0	multi-exon	FALSE	canonical	3	6	junction_7	6.66394502268034	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTCTCTGCCTCTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	45800752	45780784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45800636
ES.17991.4	chr19	-	2961	7	NIC	ENSMUSG00000025221.17	novel	3114	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	10	junction_6	5.82141639885766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGCTGTCTCTGCCTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	45785484	45780787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45784717
ES.17991.7	chr19	-	2377	9	FSM	ENSMUSG00000025221.17	ENSMUST00000079431.10	2302	9	-79	4	-40	-4	multi-exon	FALSE	canonical	0	0	junction_7	9.75240354989476	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGCTGTCTCTGCCTCT	7844	False	NA	-4	True	AATAAA	-17	NA	45804540	45780788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45785529_45785626_45804169
ES.17991.8	chr19	-	2009	8	FSM	ENSMUSG00000025221.17	ENSMUST00000161886.9	693	8	1	-1317	1	-7	multi-exon	FALSE	canonical	1	1	junction_7	8.13909687613949	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCCCGCTGTCTCTGCC	8113	False	NA	-7	True	AATAAA	-14	NA	45804271	45780791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45804169
ES.17991.9	chr19	-	183	1	Intergenic	novelGene_14918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGGGA	101	False	NA	NA	False	NA	NA	NA	45783944	45783761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45783800_45783900
ES.17992.1	chr19	+	2160	1	Intergenic	novelGene_14922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45826291	45828451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45826300_45828500
ES.17993.1	chr19	+	178	1	Intergenic	novelGene_14925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	45855044	45855222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45855000_45855200
ES.17994.1	chr19	+	204	1	Intergenic	novelGene_14927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGTAGGGGACTGGAA	NA	False	NA	NA	False	NA	NA	NA	45918788	45918992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45918800_45919000
ES.17995.1	chr19	+	194	2	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGTGAAAAGAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	45929835	45953484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45930007_45953461
ES.17995.2	chr19	+	4309	2	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAAGGATGCATAGGTA	NA	False	NA	NA	False	TTTAAA	-12	NA	45937029	45942771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45937563_45938995
ES.17996.1	chr19	+	3947	2	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGCCTTTTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	45977203	45981342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45980236_45980427
ES.17996.2	chr19	+	3085	3	Antisense	novelGene_ENSMUSG00000039901.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45977205	45981319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_45977475_45978310_45980235_45980427
ES.17997.1	chr19	+	1910	1	NIC	ENSMUSG00000097690.3	novel	945	2	NA	NA	133	-523	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	45986776	45988686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_45986800_45988700
ES.17998.1	chr19	-	3807	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-126	-5	-126	5	multi-exon	TRUE	canonical	3	159	junction_20	17.3221707646588	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTAGTGTCTTTTC	6521	False	NA	2	True	ATTAAA	-22	NA	45987053	45805797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.11	chr19	-	3875	28	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.0050503118259	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6547	False	NA	-3	True	ATTAAA	-17	NA	45987027	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45897790_45897828_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817_45981880_45986854
ES.17998.12	chr19	-	3631	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	40.9002003526742	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6584	False	NA	-3	True	ATTAAA	-17	NA	45986990	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.14	chr19	-	3734	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	39.9892785631349	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6583	False	NA	-3	True	ATTAAA	-17	NA	45986991	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963663_45963715_45967038_45967152_45986854
ES.17998.15	chr19	-	9755	7	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	6355	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.288701537329	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	-3	True	ATTAAA	-17	NA	45918513	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45910865
ES.17998.16	chr19	-	3697	25	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4936	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.1894459337079	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTGTCTCGTTAGTGT	NA	False	NA	-4	True	ATTAAA	-16	NA	45981991	45805803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
ES.17998.17	chr19	-	3758	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4947	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.8680498916892	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTAGTGTCTCGTTAGTG	NA	False	NA	-5	True	ATTAAA	-15	NA	45981980	45805804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924861_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
ES.17998.18	chr19	-	3327	27	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	39.3682545645044	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTAGTGTCTCGTTAGT	6635	False	NA	-6	True	ATTAAA	-14	NA	45986939	45805805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45806333_45806690_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.19	chr19	-	3750	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-47	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	53.0052978484227	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTAGTGTCTCGTTAG	6600	False	NA	-7	True	ATTAAA	-13	NA	45986974	45805806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941136_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963622_45963715_45967038_45967152_45986854
ES.17998.20	chr19	-	3020	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-116	772	-116	-772	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTACTTTGCTGGTCC	6531	False	NA	2	True	AATAAA	-28	NA	45987043	45806574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.21	chr19	-	3050	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4882	-781	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_25	35.5729335309867	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTCAAGGTGCCTACTT	NA	False	NA	-7	True	AATAAA	-19	NA	45982045	45806583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
ES.17998.22	chr19	-	2798	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-11	-781	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	40.9002003526742	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTCAAGGTGCCTACTT	6636	False	NA	-7	True	AATAAA	-19	NA	45986938	45806583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.23	chr19	-	2839	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-61	-781	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	39.5213549868928	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTCAAGGTGCCTACTT	6586	False	NA	-7	True	AATAAA	-19	NA	45986988	45806583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.24	chr19	-	2945	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-60	-781	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.9892785631349	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTCAAGGTGCCTACTT	6587	False	NA	-7	True	AATAAA	-19	NA	45986987	45806583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808722_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.25	chr19	-	3004	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4919	-782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.2091625104423	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCTCAAGGTGCCTACT	NA	False	NA	-8	True	AATAAA	-18	NA	45982008	45806584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874398_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
ES.17998.26	chr19	-	2828	24	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-98	-784	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	41.9782102086921	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCTCAAGGTGCCTA	6549	False	NA	-10	True	AATAAA	-16	NA	45987025	45806586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.27	chr19	-	2654	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	33	989	33	-989	multi-exon	FALSE	canonical	3	159	junction_20	17.3221707646588	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGATTGGATCTGCCTG	6680	False	NA	NA	False	TTTAAA	-25	NA	45986894	45806791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.28	chr19	-	152	1	Intergenic	novelGene_14921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	45816971	45816819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45816800_45817000
ES.17998.29	chr19	-	178	1	Intergenic	novelGene_14923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45841268	45841090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45841100_45841300
ES.17998.3	chr19	-	3694	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-70	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	58.875543309595	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCGTTAGTGTCTTT	6577	False	NA	0	True	ATTAAA	-20	NA	45986997	45805799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817_45981880_45986854
ES.17998.30	chr19	-	176	1	Intergenic	novelGene_14924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45850651	45850475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45850500_45850700
ES.17998.31	chr19	-	10187	24	Fusion	ENSMUSG00000039901.11_ENSMUSG00000117972.2	novel	632	4	NA	NA	-12	636	multi-exon	FALSE	canonical	0	0	junction_1	41.6530362078302	332	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGTAGAATTTATTAG	6635	False	NA	NA	False	NA	NA	NA	45986939	45865449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_-_45873760_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.32	chr19	-	209	1	Intergenic	novelGene_14926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGGATATGTTGGTAG	NA	False	NA	NA	False	NA	NA	NA	45883791	45883582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45883600_45883800
ES.17998.33	chr19	-	1990	21	FSM	ENSMUSG00000039901.11	ENSMUST00000235131.2	1942	21	-46	-2	-46	2	multi-exon	FALSE	canonical	2	4	junction_1	43.8	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTGCCTGTGTATGG	6601	False	NA	NA	False	AATAAA	-12	NA	45986973	45906880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_45907246_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.34	chr19	-	4835	20	ISM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	-82	101079	-82	1	5prime_fragment	FALSE	canonical	3	159	junction_14	18.7022151946125	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGCTTGCCTGTGTATG	6565	False	NA	NA	False	AATAAA	-11	NA	45987009	45906881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.35	chr19	-	172	1	Intergenic	novelGene_14928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45924311	45924139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45924100_45924300
ES.17998.36	chr19	-	184	1	Intergenic	novelGene_14929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAGATCA	NA	False	NA	NA	False	NA	NA	NA	45958566	45958382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45958400_45958600
ES.17998.37	chr19	-	183	2	Antisense	novelGene_ENSMUSG00000097690.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	279	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAGAAAAGAT	7871	False	NA	NA	False	NA	NA	NA	45990629	45958384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_45958509_45990570
ES.17998.38	chr19	-	746	1	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	19690	-56780	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45967237	45966491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45966500_45967200
ES.17998.4	chr19	-	3673	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-60	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	40.8775271050271	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCGTTAGTGTCTTT	6587	False	NA	0	True	ATTAAA	-20	NA	45986987	45805799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.5	chr19	-	3765	27	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_26	48.8615965897736	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCGTTAGTGTCTTT	6623	False	NA	0	True	ATTAAA	-20	NA	45986951	45805799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817_45981880_45986854
ES.17998.6	chr19	-	3435	21	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4942	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.6021912743774	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	False	NA	-3	True	ATTAAA	-17	NA	45981985	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45963405_45963553_45963657_45963715_45967038_45967152_45981817
ES.17998.8	chr19	-	3840	27	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.0820926873933	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6642	False	NA	-3	True	ATTAAA	-17	NA	45986932	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_45807418_45807528_45807688_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17998.9	chr19	-	3579	25	NIC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	41.311801347261	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6642	False	NA	-3	True	ATTAAA	-17	NA	45986932	45805802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ES.17999.1	chr19	+	2699	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	-41	8	-41	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTTCTTGTGCGTGTT	NA	False	NA	17	True	AATATA	-6	NA	45991905	45994604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_45991900_45994600
ES.18.1	chr1	-	180	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	4948918	4948738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4948700_4948900
ES.180.1	chr1	-	5129	20	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-21220	346	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	2.69605231049804	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTCACGTTCTATG	NA	False	NA	NA	False	AATAAA	-27	NA	22572830	22356128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.11	chr1	-	5168	23	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	2.96536480550911	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTAGCCATCTGCGTT	NA	False	NA	-1	True	AATAAA	-17	NA	22551590	22356474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22551370
ES.180.12	chr1	-	4912	20	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-21351	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	2.69605231049804	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGGTAGCCATCTGCG	NA	False	NA	-3	True	AATAAA	-15	NA	22572961	22356476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.13	chr1	-	5394	24	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-21227	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	3.11287344689891	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGGTAGCCATCTGCG	NA	False	NA	-3	True	AATAAA	-15	NA	22572837	22356476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.14	chr1	-	5309	21	NIC	ENSMUSG00000041670.20	novel	6605	28	NA	NA	-21367	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.10644491340181	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGGTAGCCATCTGCG	NA	False	NA	-3	True	AATAAA	-15	NA	22572977	22356476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.15	chr1	-	4883	2	ISM	ENSMUSG00000041670.20	ENSMUST00000097808.9	4926	33	329008	149419	32706	-793	internal_fragment	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTTTGATATTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	22515797	22508064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_22511919_22514768
ES.180.2	chr1	-	4036	10	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	52203	343	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	3.79408246199197	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATCATTTCACGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	22496300	22356131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22496120
ES.180.3	chr1	-	4416	16	NNC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	49508	337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.64173340899938	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTGACAAATCATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	22498995	22356137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22460760_22460848_22464142_22464173_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22498964
ES.180.4	chr1	-	4045	11	NIC	ENSMUSG00000041670.20	novel	6605	28	NA	NA	44281	281	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	4.02988833592198	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCGTTTCTCTGCTGCT	8353	False	NA	NA	False	AATAAA	-20	NA	22504222	22356193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22497711_22497838_22504097
ES.180.5	chr1	-	4583	16	NNC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	43961	279	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	3.04776785350999	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGGTCGTTTCTCTGCTG	8033	False	NA	NA	False	AATAAA	-18	NA	22504542	22356195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22464142_22464173_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353
ES.180.6	chr1	-	3843	10	NNC	ENSMUSG00000041670.20	novel	6605	28	NA	NA	43952	276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.92837100659193	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGAAGGTCGTTTCTCTG	8024	False	NA	NA	False	AATAAA	-15	NA	22504551	22356198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22504497
ES.180.7	chr1	-	5334	24	NNC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-20893	276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.18847167257376	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGAAGGTCGTTTCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	22572503	22356198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497830_22498711_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.8	chr1	-	5281	23	NIC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	-21201	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	2.7185466462374	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTAGCCATCTGCGTTC	NA	False	NA	0	True	AATAAA	-18	NA	22572811	22356473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22572479
ES.180.9	chr1	-	4092	16	NNC	ENSMUSG00000041670.20	novel	7411	32	NA	NA	49496	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.64173340899938	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTAGCCATCTGCGTTC	NA	False	NA	0	True	AATAAA	-18	NA	22499007	22356473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22460760_22460848_22464142_22464173_22467674_22467788_22474667_22474740_22496120_22496184_22497711_22497838_22498715_22498873_22498964
ES.1800.1	chr1	+	847	1	Antisense	novelGene_ENSMUSG00000026564.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTGGGTTTCCTTGTG	NA	False	NA	NA	False	AAAACA	-26	NA	165928143	165928990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_165928100_165929000
ES.18000.1	chr19	-	169	1	Intergenic	novelGene_14930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAACAAAGGGC	804	False	NA	NA	False	NA	NA	NA	45997696	45997527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_45997500_45997700
ES.18001.1	chr19	+	165	1	Intergenic	novelGene_14931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	45998123	45998288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_45998100_45998300
ES.18002.1	chr19	+	210	1	Intergenic	novelGene_14932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACCAGTCCTCCTTGC	2940	False	NA	NA	False	NA	NA	NA	46006447	46006657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46006400_46006700
ES.18003.1	chr19	+	178	1	Intergenic	novelGene_14933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAAGACTT	4936	False	NA	NA	False	NA	NA	NA	46008443	46008621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46008400_46008600
ES.18004.1	chr19	-	312	1	Intergenic	novelGene_14934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTTAAAACCAAACCA	NA	False	NA	NA	False	NA	NA	NA	46012891	46012579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46012600_46012900
ES.18004.2	chr19	-	173	1	Intergenic	novelGene_14935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	46012892	46012719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46012700_46012900
ES.18005.1	chr19	+	156	1	Intergenic	novelGene_14936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	46013940	46014096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46013900_46014100
ES.18006.1	chr19	-	5408	10	NIC	ENSMUSG00000025223.16	novel	2088	11	NA	NA	0	1584	intron_retention	TRUE	canonical	3	657	junction_1	53.8023359904074	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCATGAGGTTCATGGA	6721	False	NA	NA	False	NA	NA	NA	46033650	46018424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.10	chr19	-	3042	9	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-13	17	intron_retention	FALSE	canonical	3	724	junction_1	42.5365651528188	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCCTGTTGAAAATCCA	6705	False	NA	-13	True	ATTAAA	-38	NA	46033666	46021014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.11	chr19	-	2108	11	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-17	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.18799282982	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTATTCCCCTGTTGA	6701	False	NA	-20	True	ATTAAA	-31	NA	46033670	46021021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021748_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.12	chr19	-	2322	11	NIC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	-25	7	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	267.114750622275	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCCCTATTCCCCTGT	8063	False	NA	-23	True	ATTAAA	-28	NA	46028085	46021024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ES.18006.13	chr19	-	2581	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	-466	-7	-466	7	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCCCTATTCCCCTGT	6252	False	NA	-23	True	ATTAAA	-28	NA	46034119	46021024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.14	chr19	-	2321	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	-25	-1	-25	0	multi-exon	FALSE	canonical	3	31	junction_10	244.379806858095	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	8063	False	NA	-30	True	ATTAAA	-21	NA	46028085	46021031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ES.18006.17	chr19	-	2930	9	NIC	ENSMUSG00000025223.16	novel	2108	11	NA	NA	-19	0	intron_retention	FALSE	canonical	3	657	junction_1	56.3781872713197	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6699	False	NA	-30	True	ATTAAA	-21	NA	46033672	46021031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024591_46024701_46024805_46033268
ES.18006.18	chr19	-	2419	12	NNC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	302.422888197612	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	8077	False	NA	-30	True	ATTAAA	-21	NA	46028071	46021031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46025397_46025510_46027493
ES.18006.19	chr19	-	2896	9	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	35	-9	intron_retention	FALSE	canonical	3	657	junction_1	46.9359603609003	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	6757	False	NA	-40	True	ATTAAA	-11	NA	46033614	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.2	chr19	-	4922	9	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	1	1014	intron_retention	FALSE	canonical	3	657	junction_1	50.3636773875776	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGACCCCAAGGACGA	6723	False	NA	NA	False	NA	NA	NA	46033648	46018994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.22	chr19	-	1947	11	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.18799282982	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	6717	False	NA	-40	True	ATTAAA	-11	NA	46033654	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021623_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.24	chr19	-	2293	11	NNC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	-17	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	306.666936594084	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	8071	False	NA	-40	True	ATTAAA	-11	NA	46028077	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023869_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ES.18006.26	chr19	-	2929	11	NNC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	19	-9	intron_retention	FALSE	canonical	1	3	junction_9	307.389720062334	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	8247	False	NA	-40	True	ATTAAA	-11	NA	46027901	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46025397_46025510_46027493
ES.18006.27	chr19	-	1770	11	NNC	ENSMUSG00000025223.16	novel	2295	11	NA	NA	34	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	251.732794844057	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	8122	False	NA	-40	True	ATTAAA	-11	NA	46028026	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027975
ES.18006.28	chr19	-	2132	11	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	253.832405338641	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	6700	False	NA	-40	True	ATTAAA	-11	NA	46033671	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022626_46022823_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.29	chr19	-	2941	10	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-22	-9	intron_retention	FALSE	canonical	0	0	junction_1	245.637090535842	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	6696	False	NA	-40	True	ATTAAA	-11	NA	46033675	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46022620_46022702_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.3	chr19	-	4824	10	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-19	978	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6699	False	NA	NA	False	NA	NA	NA	46033672	46019030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.30	chr19	-	1670	10	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-322	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	263.725212397907	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	8452	False	NA	-40	True	ATTAAA	-11	NA	46024761	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023128_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701
ES.18006.31	chr19	-	2576	10	NNC	ENSMUSG00000025223.16	novel	2014	10	NA	NA	1295	-9	intron_retention	FALSE	canonical	0	0	junction_9	245.029753799235	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	8313	False	NA	-40	True	ATTAAA	-11	NA	46032058	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46031891
ES.18006.32	chr19	-	2895	9	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	657	junction_1	55.5849574975101	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACTCATG	6715	False	NA	-40	True	ATTAAA	-11	NA	46033656	46021041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.35	chr19	-	2112	12	NNC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	29	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	303.474453293276	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAATATTATTAAA	6751	False	NA	-70	True	NA	NA	NA	46033620	46021071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46032761_46032833_46033268
ES.18006.37	chr19	-	3996	8	NIC	ENSMUSG00000025223.16	novel	2014	10	NA	NA	1707	-17	intron_retention	FALSE	canonical	3	724	junction_1	43.4591058070805	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAATATTATTAAA	9935	False	NA	-70	True	NA	NA	NA	46026213	46021071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701
ES.18006.4	chr19	-	3202	11	FSM	ENSMUSG00000025223.16	ENSMUST00000156585.9	3133	11	-22	-47	-18	47	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTCCTGGTTAGTCAT	6700	False	NA	NA	False	AATAAA	-17	NA	46033671	46019961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.5	chr19	-	3763	10	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	100	40	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGAGAGTGTCCTGGT	6822	False	NA	NA	False	AATAAA	-10	NA	46033549	46019968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.6	chr19	-	2103	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	131	-126	127	126	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCCGCGCTTCAGAACA	6849	False	NA	96	True	NA	NA	NA	46033522	46020905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.7	chr19	-	2667	11	FSM	ENSMUSG00000025223.16	ENSMUST00000185355.7	2088	11	-537	-42	-534	19	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTGTTGAAAATCCAGC	6184	False	NA	-11	True	ATTAAA	-40	NA	46034187	46021012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.8	chr19	-	3310	10	NIC	ENSMUSG00000025223.16	novel	3133	11	NA	NA	-488	18	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTGTTGAAAATCCAG	6230	False	NA	-12	True	ATTAAA	-39	NA	46034141	46021013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ES.18006.9	chr19	-	3057	10	FSM	ENSMUSG00000025223.16	ENSMUST00000137771.2	2014	10	-194	-849	-54	17	multi-exon	FALSE	canonical	3	31	junction_9	235.530344562811	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCCTGTTGAAAATCCA	8034	False	NA	-13	True	ATTAAA	-38	NA	46028114	46021014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ES.18007.1	chr19	-	134	1	Intergenic	novelGene_14937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAACAAAACAAA	4008	False	NA	NA	False	NA	NA	NA	46041529	46041395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46041400_46041500
ES.18008.1	chr19	-	301	1	Intergenic	novelGene_14938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTAAGAT	1748	False	NA	NA	False	AATAAA	-11	NA	46043789	46043488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46043500_46043800
ES.18009.10	chr19	+	5259	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	119.48246386645	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46044956	46061348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.100	chr19	+	130	1	Intergenic	novelGene_14939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAACA	5657	False	NA	NA	False	NA	NA	NA	46062955	46063085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46063000_46063100
ES.18009.102	chr19	+	3719	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-182	-14	-75	14	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTTGTGCACGTAAGGC	62	False	NA	27	True	AATAAA	-30	NA	46064226	46073983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.103	chr19	+	2987	10	NIC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	-72	0	intron_retention	FALSE	canonical	3	421	junction_3	163.753880361148	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	65	False	NA	14	True	ATTAAA	-14	NA	46064229	46072900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072283_46072450
ES.18009.105	chr19	+	2723	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	-174	974	-67	95	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGGATTCTCTTTATG	70	False	NA	50	True	AAAACA	-23	NA	46064234	46072995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.107	chr19	+	3628	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	330.283211804657	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	85	False	NA	11	True	AATAAA	-14	NA	46064249	46073967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072024_46072189_46072283_46072460
ES.18009.11	chr19	+	5517	13	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	0	intron_retention	FALSE	canonical	3	238	junction_7	76.5355309643828	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46044958	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060774_46060987
ES.18009.110	chr19	+	2920	11	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-49	67	intron_retention	FALSE	canonical	3	126	junction_2	256.632110227851	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	88	False	NA	22	True	ATTAAA	-27	NA	46064252	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072283_46072450
ES.18009.112	chr19	+	2891	11	NNC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-27	71	intron_retention	FALSE	non_canonical	0	0	junction_9	288.050967712313	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACATGGTAATAATTTT	110	False	NA	26	True	ATTAAA	-31	NA	46064274	46072971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072065_46072189_46072283_46072450
ES.18009.114	chr19	+	3761	12	NNC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	388.374893435762	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	123	False	NA	10	True	AATAAA	-13	NA	46064287	46073966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067461_46067569_46067694_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071958_46072066_46072189_46072283_46072450
ES.18009.117	chr19	+	3661	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	332.5726633217	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	124	False	NA	10	True	AATAAA	-13	NA	46064288	46073966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067296_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.119	chr19	+	2755	12	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-7	71	intron_retention	FALSE	canonical	0	0	junction_10	274.65855587265	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACATGGTAATAATTTT	130	False	NA	26	True	ATTAAA	-31	NA	46064294	46072971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.122	chr19	+	3699	12	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-6	4	intron_retention	FALSE	non_canonical	0	0	junction_10	276.931593426999	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGTTATGTCGTTGTG	148	False	NA	17	True	AATAAA	-20	NA	46064312	46073973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072025_46072189_46072283_46072450
ES.18009.125	chr19	+	3547	13	NNC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	325.939273058989	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	212	False	NA	11	True	AATAAA	-14	NA	46064376	46073967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068356_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072067_46072189_46072283_46072450
ES.18009.127	chr19	+	2723	11	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	438	junction_3	151.193386098731	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTTGTGATTTTC	217	False	NA	12	True	ATTAAA	-12	NA	46064381	46072898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072283_46072450
ES.18009.129	chr19	+	3740	12	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_10	345.327321070439	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGAGTTATGTCGTT	233	False	NA	14	True	AATAAA	-17	NA	46064397	46073970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068349_46068613_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.13	chr19	+	5144	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	139.727841973192	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46044968	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050734_46050846_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.131	chr19	+	3652	12	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	8	3	intron_retention	FALSE	canonical	0	0	junction_10	274.65855587265	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGAGTTATGTCGTTGT	234	False	NA	16	True	AATAAA	-19	NA	46064398	46073972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.132	chr19	+	2578	12	NIC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_10	276.931593426999	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	237	False	NA	14	True	ATTAAA	-14	NA	46064401	46072900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.134	chr19	+	3864	11	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-7	65	intron_retention	FALSE	canonical	0	0	junction_9	287.847338010967	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACAACACATGGTAAT	237	False	NA	20	True	ATTAAA	-25	NA	46064401	46072965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068346_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.135	chr19	+	3492	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	263.476899156053	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	237	False	NA	13	True	AATAAA	-16	NA	46064401	46073969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072025_46072189_46072283_46072450
ES.18009.137	chr19	+	2638	12	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	67	intron_retention	FALSE	canonical	0	0	junction_10	271.14001750186	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	239	False	NA	22	True	ATTAAA	-27	NA	46064403	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.14	chr19	+	5140	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.996985554994	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTGGTATTTGGTTT	NA	False	NA	17	True	AATAAA	-19	NA	46044968	46061244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.142	chr19	+	2453	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	329.690543034929	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	243	False	NA	14	True	ATTAAA	-14	NA	46064407	46072900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072066_46072189_46072283_46072450
ES.18009.147	chr19	+	5120	11	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	266.819583239312	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTTGTGATTTTC	245	False	NA	12	True	ATTAAA	-12	NA	46064409	46072898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.148	chr19	+	2647	12	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	1	67	intron_retention	FALSE	canonical	3	438	junction_4	145.570976128173	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	245	False	NA	22	True	ATTAAA	-27	NA	46064409	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072283_46072450
ES.18009.153	chr19	+	2528	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	67	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	332.5726633217	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	-1	True	NA	22	True	ATTAAA	-27	NA	46064422	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067296_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.156	chr19	+	4853	8	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_6	314.889938660142	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	-1	True	NA	11	True	AATAAA	-14	NA	46064422	46073967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46068525_46069742_46069862_46069979_46070816_46070954_46071803_46072189_46072283_46072450
ES.18009.157	chr19	+	2512	12	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_10	276.377033168116	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	-1	True	NA	14	True	ATTAAA	-14	NA	46064422	46072900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072025_46072189_46072283_46072450
ES.18009.158	chr19	+	3638	12	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	2	intron_retention	FALSE	canonical	3	438	junction_4	145.570976128173	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGAGTTATGTCGTTG	-1	True	NA	15	True	AATAAA	-18	NA	46064422	46073971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072283_46072450
ES.18009.159	chr19	+	2465	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-4	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	265.145819419344	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	0	True	NA	22	True	ATTAAA	-27	NA	46064423	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072025_46072189_46072283_46072450
ES.18009.16	chr19	+	5811	8	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	1359	intron_retention	FALSE	canonical	3	156	junction_4	96.6443089321849	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	46044977	46058886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46056528_46057477
ES.18009.160	chr19	+	3489	13	NNC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	362.366948762653	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	2	False	NA	10	True	AATAAA	-13	NA	46064425	46073966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069879_46070016_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.164	chr19	+	3293	10	NIC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	-6	75	intron_retention	FALSE	canonical	0	0	junction_8	300.51178568125	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTAATAATTTTCCCT	22	False	NA	30	True	ATTAAA	-35	NA	46064445	46072975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070816_46070954_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.165	chr19	+	3557	12	NNC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	274.65855587265	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTTCAGAGTTATGT	23	False	NA	10	True	AATAAA	-13	NA	46064446	46073966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071803_46071958_46072025_46072189_46072283_46072450
ES.18009.168	chr19	+	2411	13	NNC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	360.334181312601	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGATTTTTGTTGTGAT	24	False	NA	8	True	ATTAAA	-8	NA	46064447	46072894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071802_46071958_46072066_46072189_46072283_46072450
ES.18009.17	chr19	+	5597	13	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	8	-1	intron_retention	FALSE	canonical	3	238	junction_7	76.5355309643828	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46044985	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060774_46060987
ES.18009.180	chr19	+	4133	12	NIC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_10	258.052080078921	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	27	False	NA	13	True	AATAAA	-16	NA	46064450	46073969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ES.18009.182	chr19	+	3775	10	NIC	ENSMUSG00000015176.12	novel	2978	13	NA	NA	1460	71	intron_retention	FALSE	canonical	3	421	junction_2	138.273034604602	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACATGGTAATAATTTT	1529	False	NA	26	True	ATTAAA	-31	NA	46065952	46072971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072283_46072450
ES.18009.183	chr19	+	4011	4	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	3598	67	intron_retention	FALSE	canonical	3	733	junction_2	73.5572339519824	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	3667	False	NA	22	True	ATTAAA	-27	NA	46068090	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46070116_46070686_46070816_46070954_46071803_46071958
ES.18009.184	chr19	+	2834	4	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	4784	67	intron_retention	FALSE	canonical	3	811	junction_3	33.2298393348843	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	4853	False	NA	22	True	ATTAAA	-27	NA	46069276	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46069862_46069979_46070116_46070686_46072283_46072450
ES.18009.185	chr19	+	1196	3	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	6655	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	405.5	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTTGTGATTTTC	6724	False	NA	12	True	ATTAAA	-12	NA	46071147	46072898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46071803_46072189_46072283_46072450
ES.18009.186	chr19	+	850	3	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	7264	-2	intron_retention	FALSE	canonical	0	0	junction_1	405.5	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGTTGTGATTTTC	7333	False	NA	12	True	ATTAAA	-12	NA	46071756	46072898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46072066_46072189_46072283_46072450
ES.18009.20	chr19	+	7431	25	Fusion	ENSMUSG00000015176.12_ENSMUSG00000055491.15	novel	5246	14	NA	NA	20	67	intron_retention	FALSE	canonical	0	0	junction_14	247.58819977266	1373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACACATGGTAATAA	NA	False	NA	22	True	ATTAAA	-27	NA	46044997	46072967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987_46061088_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072283_46072450
ES.18009.21	chr19	+	4965	13	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	159.166644851656	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46044997	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.24	chr19	+	5086	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.073790870822	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045000	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045165_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.25	chr19	+	5334	13	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	238	junction_6	82.912604590617	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46045000	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.26	chr19	+	5104	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	6	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	135.667013166571	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGGTATTTGGTTTTT	NA	False	NA	19	True	AATAAA	-21	NA	46045000	46061246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.28	chr19	+	5876	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.841564722073	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045000	46061243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46054892_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.29	chr19	+	5211	14	NNC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	157.352805267157	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46045000	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.3	chr19	+	5200	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	-54	100	-54	10	multi-exon	TRUE	canonical	3	236	junction_7	80.0611452719015	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATTTGGTTTTTAATA	NA	False	NA	23	True	AATAAA	-25	NA	46044923	46061250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.32	chr19	+	8147	12	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	2	intron_retention	FALSE	non_canonical	0	0	junction_7	158.472877466657	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045002	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46057131_46057279_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.34	chr19	+	4957	13	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	149.22773424088	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045002	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060987
ES.18009.36	chr19	+	5103	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.563158672168	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045002	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049834_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.39	chr19	+	6977	11	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	2	junction_3	169.756914439442	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46045002	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46059851_46059963_46060025_46060140_46060774_46060987
ES.18009.41	chr19	+	5552	9	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	1	intron_retention	FALSE	canonical	0	0	junction_2	151.285687938417	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045002	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957
ES.18009.45	chr19	+	5229	13	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-17	4	intron_retention	FALSE	canonical	3	238	junction_6	82.912604590617	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTGGTATTTGGTTT	NA	False	NA	17	True	AATAAA	-19	NA	46045002	46061244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.48	chr19	+	5002	13	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	165.779032148218	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045004	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.5	chr19	+	5183	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-46	4	at_least_one_novel_splicesite	TRUE	canonical	3	90	junction_2	145.962911719495	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTGGTATTTGGTTT	NA	False	NA	17	True	AATAAA	-19	NA	46044931	46061244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.50	chr19	+	5688	12	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	238	junction_7	79.7943638101575	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46045004	46061350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46060025_46060140_46060774_46060987
ES.18009.53	chr19	+	4719	15	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	148.238999660711	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045007	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46051297_46051675_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.55	chr19	+	5071	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.602108132229	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46045014	46061350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045112_46049911_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.57	chr19	+	4292	1	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	-586	mono-exon	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAACCAAAAACCCCAAA	NA	False	NA	NA	False	NA	NA	NA	46045019	46049311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045000_46049300
ES.18009.58	chr19	+	5018	14	NNC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.810631401029	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045021	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050655_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.59	chr19	+	5145	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.791836565153	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045021	46061348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045183_46049841_46050016_46050628_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.60	chr19	+	8288	11	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-1	1	intron_retention	FALSE	canonical	3	329	junction_4	63.2740863229174	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045021	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.61	chr19	+	6588	13	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	16	2	intron_retention	FALSE	canonical	3	238	junction_7	82.2186701560067	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045038	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.62	chr19	+	4988	14	NIC	ENSMUSG00000055491.15	novel	386	4	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	137.291078503617	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045244	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045299_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.64	chr19	+	5246	14	NNC	ENSMUSG00000055491.15	novel	543	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.073790870822	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTTTTAAGTGGTATT	NA	False	NA	11	True	AATAAA	-13	NA	46045269	46061238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045596_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.65	chr19	+	5057	14	NNC	ENSMUSG00000055491.15	novel	543	4	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.776863170628	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045282	46061243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045406_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.67	chr19	+	5040	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	-43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.681499802243	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045631	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045737_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.68	chr19	+	5094	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	-42	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	146.98581020754	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGGTATTTGGTT	NA	False	NA	16	True	AATAAA	-18	NA	46045632	46061243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.7	chr19	+	5273	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_7	79.6883723412051	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46044953	46061350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.70	chr19	+	5061	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	156.020291503851	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045675	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045799_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.71	chr19	+	5034	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	154.194490266035	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTTTTAAGTGGTATTT	NA	False	NA	12	True	AATAAA	-14	NA	46045691	46061239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.72	chr19	+	5032	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	7	7	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	133.150935399017	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTATTTGGTTTTTA	NA	False	NA	20	True	AATAAA	-22	NA	46045704	46061247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.73	chr19	+	5308	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	180.683907850735	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46045716	46061350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060421_46060774_46060987
ES.18009.75	chr19	+	5113	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	166.229968317581	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045721	46061348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045799_46049841_46050016_46050579_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.76	chr19	+	6205	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	135.986207097301	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045729	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46047001_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.77	chr19	+	4972	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	169.670896201298	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045749	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050938_46051056_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.78	chr19	+	6200	13	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	75	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	173.526875119933	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCAGCGTGTCCTTTCT	NA	False	NA	4	True	AATAAA	-16	NA	46045772	46061349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46047001_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.79	chr19	+	6157	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	75	1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	168.417767408009	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045772	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46047001_46049841_46050016_46050579_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.80	chr19	+	5061	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	132.96647261711	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045779	46061348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.81	chr19	+	5151	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	151.112599578855	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045786	46061240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46046016_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.83	chr19	+	6185	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.984415146415	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46045786	46061350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46047001_46049841_46050016_46050655_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.84	chr19	+	5164	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	89	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	137.72741280038	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46045786	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045910_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.85	chr19	+	5162	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	89	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	137.685732546061	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46045786	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46046016_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.86	chr19	+	5058	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	90	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	159.844858216412	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTTTTAAGTGGTATTT	NA	False	NA	12	True	AATAAA	-14	NA	46045787	46061239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045910_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.87	chr19	+	5262	14	NNC	ENSMUSG00000055491.15	novel	564	5	NA	NA	94	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	137.685732546061	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCCAGCGTGTCCTTT	NA	False	NA	2	True	AATAAA	-14	NA	46045791	46061347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46046016_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.88	chr19	+	5020	14	NNC	ENSMUSG00000055491.15	novel	689	2	NA	NA	106	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	167.917280283333	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTTTTAAGTGGTATT	NA	False	NA	11	True	AATAAA	-13	NA	46045803	46061238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46045910_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.89	chr19	+	4949	14	NNC	ENSMUSG00000055491.15	novel	689	2	NA	NA	255	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.208394510757	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTAAGTGGTATTTGG	NA	False	NA	14	True	AATAAA	-16	NA	46045952	46061241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46046016_46049841_46050016_46050628_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.9	chr19	+	5266	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTGTCCTTTCTGTGTG	NA	False	NA	9	True	AATAAA	-21	NA	46044955	46061354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.92	chr19	+	6652	23	Fusion	ENSMUSG00000015176.12_ENSMUSG00000055491.15	novel	5205	14	NA	NA	5214	2	multi-exon	FALSE	non_canonical	0	0	junction_11	288.094351509884	1369	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTGATTTTCAGAG	NA	False	NA	16	True	ATTAAA	-16	NA	46050911	46072902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987_46061088_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072065_46072189_46072283_46072450
ES.18009.94	chr19	+	3505	10	NNC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-4187	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.225859519426	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTTTTAAGTGGTATTT	NA	False	NA	12	True	AATAAA	-14	NA	46052085	46061239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060110_46060263_46060621_46060774_46060987
ES.18009.95	chr19	+	4164	10	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	-4003	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.091650893394	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCCAGCGTGTCCTT	NA	False	NA	1	True	AATAAA	-13	NA	46052269	46061346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46053920_46054102_46054157_46054892_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.96	chr19	+	3400	8	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-3643	2	intron_retention	FALSE	canonical	3	238	junction_3	91.3298574242994	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46052629	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46060025_46060140_46060774_46060987
ES.18009.97	chr19	+	4323	9	NNC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-3424	0	intron_retention	FALSE	canonical	3	97	junction_5	145.489690356396	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46052848	46061348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
ES.18009.98	chr19	+	4056	5	NIC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	-1663	-2	intron_retention	FALSE	canonical	3	433	junction_1	22.9074223779106	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCCAGCGTGTCCTT	NA	False	NA	1	True	AATAAA	-13	NA	46054609	46061346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140
ES.18009.99	chr19	+	1948	7	ISM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	11018	106	-232	2	3prime_fragment	FALSE	canonical	3	433	junction_1	46.196741106802	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTGGTATTTGGT	NA	False	NA	15	True	AATAAA	-17	NA	46056040	46061242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ES.1801.1	chr1	+	2707	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	-191	-1	-191	1	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTCACCCATCT	NA	False	NA	11	True	AATAAA	-20	NA	165957615	165994080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.10	chr1	+	2960	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	9	-3	intron_retention	FALSE	canonical	3	176	junction_5	20.3862698893152	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTTTCTTTGTTCACC	NA	False	NA	6	True	AATAAA	-15	NA	165958044	165994075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165992285_165992715
ES.1801.11	chr1	+	2282	7	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	15937	0	intron_retention	FALSE	canonical	0	0	junction_1	75.9363768778399	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165973972	165994078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165974108_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.12	chr1	+	2289	6	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	21699	0	intron_retention	FALSE	canonical	2	8	junction_1	77.9717897704035	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165979734	165994078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165980032_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.13	chr1	+	2288	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	24505	-2	intron_retention	FALSE	canonical	0	0	junction_1	80.1888396224811	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTCTTTGTTCACCC	NA	False	NA	7	True	AATAAA	-16	NA	165982540	165994076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165983056_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.14	chr1	+	1913	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	24529	-6	intron_retention	FALSE	canonical	3	12	junction_1	75.0083328704218	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCACTTTTCTTTGTTC	NA	False	NA	3	True	AATAAA	-12	NA	165982564	165994072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165982709_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.15	chr1	+	3261	3	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	26248	0	intron_retention	FALSE	canonical	3	176	junction_2	8.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165984283	165994079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_165985238_165991341_165992285_165992715
ES.1801.2	chr1	+	2330	7	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-49	0	intron_retention	FALSE	canonical	2	5	junction_1	74.126955660917	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165957757	165994078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165957941_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.3	chr1	+	1147	2	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165957789	165994078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165957816_165992957
ES.1801.4	chr1	+	2234	8	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_7	88.9762637460356	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCACTTTTCTTTGTTC	NA	False	NA	3	True	AATAAA	-12	NA	165957789	165994072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165957941_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992854_165992911
ES.1801.5	chr1	+	2135	6	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-15	-6	intron_retention	FALSE	canonical	0	0	junction_1	81.0742869225502	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCACTTTTCTTTGTTC	NA	False	NA	3	True	AATAAA	-12	NA	165957791	165994072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165957941_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.6	chr1	+	2183	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	10	junction_1	77.1974092829546	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCACTTTTCTTTGTTC	NA	False	NA	3	True	AATAAA	-12	NA	165957976	165994072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_165958174_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ES.1801.7	chr1	+	786	4	FSM	ENSMUSG00000000544.15	ENSMUST00000027847.7	787	4	1	0	1	0	multi-exon	FALSE	canonical	3	10	junction_3	86.0736119067085	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTTCTTTCTCGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	165957986	165981705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165981478
ES.1801.8	chr1	+	2261	8	NNC	ENSMUSG00000000544.15	novel	2227	8	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_7	69.1452183776275	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCACTTTTCTTTGTT	NA	False	NA	2	True	AATAAA	-11	NA	165957994	165994071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992854_165992911
ES.1801.9	chr1	+	946	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	18	4283	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	90.4526809995149	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACATTGCTTTTATAGTG	NA	False	NA	NA	False	CATAAA	-15	NA	165958003	165989381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165989133
ES.18010.1	chr19	-	2430	2	Antisense	novelGene_ENSMUSG00000055491.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	46057468	46054890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46057141_46057288
ES.18011.1	chr19	-	140	1	Intergenic	novelGene_14940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46063387	46063247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46063200_46063400
ES.18012.1	chr19	+	172	1	Intergenic	novelGene_14941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAGGAAACC	3415	False	NA	NA	False	NA	NA	NA	46079424	46079596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46079400_46079600
ES.18013.1	chr19	-	161	1	Intergenic	novelGene_14942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	46108559	46108398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46108400_46108600
ES.18014.1	chr19	-	160	1	Intergenic	novelGene_14943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	46108966	46108806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46108800_46109000
ES.18015.2	chr19	-	1506	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	-129	3	-129	-3	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTGATGATTCAGAC	NA	False	NA	NA	False	AATAAA	-16	NA	46136894	46124126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
ES.18016.1	chr19	+	241	1	Intergenic	novelGene_14944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAAAAAACC	6566	False	NA	NA	False	AATAAA	-11	NA	46138462	46138703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46138500_46138700
ES.18017.1	chr19	+	6498	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	-48	0	-48	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9003	False	NA	19	True	AATAAA	-19	NA	46140899	46274949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.11	chr19	+	6524	41	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.118161150922	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATTTCCTTCCCGCTG	9083	False	NA	13	True	AATAAA	-13	NA	46140979	46274943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46221211_46221336_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.12	chr19	+	6306	40	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	19.4143375447404	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTCCTTCCCGCTGAT	9083	False	NA	15	True	AATAAA	-15	NA	46140979	46274945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253712_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.13	chr19	+	6274	39	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_38	18.6907512643415	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTCCCGCTGATT	9083	False	NA	16	True	AATAAA	-16	NA	46140979	46274946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46274098
ES.18017.15	chr19	+	6469	41	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	23.118161150922	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTCCTTCCCGCTGAT	9085	False	NA	15	True	AATAAA	-15	NA	46140981	46274945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271212_46271282_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.16	chr19	+	6497	41	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.118161150922	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTCCCGCTGATT	9085	False	NA	16	True	AATAAA	-16	NA	46140981	46274946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46191961_46192058_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.17	chr19	+	6475	41	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	23.0802946255025	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTCCTTCCCGCTGAT	9085	False	NA	15	True	AATAAA	-15	NA	46140981	46274945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.18	chr19	+	7281	39	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_11	14.3097897644407	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9090	False	NA	18	True	AATAAA	-18	NA	46140986	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.2	chr19	+	6438	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	14.1633654350608	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9051	False	NA	19	True	AATAAA	-19	NA	46140947	46274949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.20	chr19	+	6206	39	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	23.1483832141548	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9097	False	NA	18	True	AATAAA	-18	NA	46140993	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272756_46272870_46274098
ES.18017.21	chr19	+	6324	40	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	19.0837801296498	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTCCCGCTGATT	9099	False	NA	16	True	AATAAA	-16	NA	46140995	46274946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255704_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.22	chr19	+	5088	30	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-12	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	23.4197087646429	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	9103	False	NA	NA	False	NA	NA	NA	46140999	46262866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256858_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261957_46262511
ES.18017.23	chr19	+	6267	39	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_38	19.9966236762298	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9104	False	NA	18	True	AATAAA	-18	NA	46141000	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46274098
ES.18017.25	chr19	+	6655	39	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	-7	0	intron_retention	FALSE	canonical	3	63	junction_11	14.0543070162271	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9108	False	NA	19	True	AATAAA	-19	NA	46141004	46274949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.26	chr19	+	4604	1	Intergenic	novelGene_14946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTTAACTTGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	46186544	46191148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46186500_46191100
ES.18017.27	chr19	+	179	1	Intergenic	novelGene_14947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAGGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	46209286	46209465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46209300_46209500
ES.18017.28	chr19	+	181	1	Intergenic	novelGene_14948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTGTATA	NA	False	NA	NA	False	NA	NA	NA	46215530	46215711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46215500_46215700
ES.18017.29	chr19	+	5983	37	FSM	ENSMUSG00000025224.17	ENSMUST00000176992.8	5981	37	-2	0	-2	0	multi-exon	FALSE	canonical	3	63	junction_8	13.9870972288352	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	6696	False	NA	18	True	AATAAA	-18	NA	46234524	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.3	chr19	+	6295	39	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	19.6839994359636	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	9052	False	NA	18	True	AATAAA	-18	NA	46140948	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.30	chr19	+	5367	32	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	5159	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	21.5846228071599	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCCCGCTGATTTTCT	NA	False	NA	20	True	AATAAA	-20	NA	46247664	46274950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256858_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18017.31	chr19	+	5155	3	ISM	ENSMUSG00000025224.17	ENSMUST00000176422.2	2383	6	-1233	-1036	-312	1036	intron_retention	FALSE	canonical	3	66	junction_1	13.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46256923	46262869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46259290_46259993_46260059_46260145
ES.18017.32	chr19	+	3864	2	NNC	ENSMUSG00000025224.17	novel	2383	6	NA	NA	-105	1032	intron_retention	TRUE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46258051	46262865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46259475_46260424
ES.18017.34	chr19	+	6632	6	NIC	ENSMUSG00000025224.17	novel	5981	37	NA	NA	-999	-5	intron_retention	FALSE	canonical	3	89	junction_1	9.68297474952816	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATTTCCTTCCCGCTG	NA	False	NA	13	True	AATAAA	-13	NA	46267312	46274943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46267875_46268350_46268512_46268615_46268863_46268976_46271625_46271758_46271890_46272060
ES.18017.35	chr19	+	2750	6	NIC	ENSMUSG00000025224.17	novel	5981	37	NA	NA	-626	0	intron_retention	FALSE	canonical	3	89	junction_3	7.93977329651168	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	2809	False	NA	18	True	AATAAA	-18	NA	46270655	46274948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46273273_46274098
ES.18017.4	chr19	+	4121	30	NNC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	4	2699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	19.3473168230657	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTTTTTTGAGACAAG	9055	False	NA	NA	False	NA	NA	NA	46140951	46264532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46264358
ES.18017.8	chr19	+	2034	1	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	2	-17951	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGTTAAAAGTAAGAGT	9074	False	NA	NA	False	NA	NA	NA	46140970	46143004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141000_46143000
ES.18017.9	chr19	+	6383	40	NIC	ENSMUSG00000025224.17	novel	6450	40	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	19.1969274881051	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTCCCGCTGATT	9074	False	NA	16	True	AATAAA	-16	NA	46140970	46274946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256858_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ES.18018.1	chr19	-	1086	1	Intergenic	novelGene_14945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGCACTG	NA	False	NA	NA	False	NA	NA	NA	46156934	46155848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46155800_46156900
ES.18019.1	chr19	+	3031	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-45	-7	-45	2	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTGCTGCCCATCC	NA	False	NA	30	True	AATAAA	-35	NA	46293137	46300468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.10	chr19	+	3209	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	-5	-63	-5	0	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGCAGTTTTAATGAG	NA	False	NA	91	True	AATAGA	-21	NA	46294129	46300529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.13	chr19	+	1703	11	ISM	ENSMUSG00000025225.16	ENSMUST00000236820.2	2827	21	2865	-118	2742	-10	3prime_fragment	FALSE	canonical	3	47	junction_1	8.63712915267567	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACGGTACAGCAACCC	NA	False	NA	13	True	AATAAA	-18	NA	46297301	46300451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.2	chr19	+	2912	23	NNC	ENSMUSG00000025225.16	novel	2979	23	NA	NA	-30	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	14.492588587514	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACGGTACAGCAACCC	NA	False	NA	13	True	AATAAA	-18	NA	46293152	46300451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297680_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.4	chr19	+	3367	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-6	-382	-6	19	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAGGAAAGGAAACC	NA	False	NA	NA	False	NA	NA	NA	46293176	46300843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.5	chr19	+	2952	23	NNC	ENSMUSG00000025225.16	novel	2979	23	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.395534201921	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTACAGCAACCCCAATG	NA	False	NA	18	True	AATAAA	-23	NA	46293177	46300456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299747_46299894_46300019_46300132_46300211
ES.18019.6	chr19	+	6334	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	-3	-3352	-3	2989	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGACCTATGTGACTTC	NA	False	NA	NA	False	AATAAA	-14	NA	46293179	46303813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.7	chr19	+	3110	22	NIC	ENSMUSG00000025225.16	novel	2979	23	NA	NA	-3	2	intron_retention	FALSE	canonical	3	47	junction_12	7.85786432474064	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTGCTGCCCATCC	NA	False	NA	30	True	AATAAA	-35	NA	46293179	46300468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46293260_46294368_46294464_46294721_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ES.18019.8	chr19	+	6762	20	NIC	ENSMUSG00000025225.16	novel	3846	22	NA	NA	-13	2987	intron_retention	FALSE	canonical	3	47	junction_12	7.04791672722556	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGGACCTATGTGACT	NA	False	NA	NA	False	AATAAA	-12	NA	46293225	46303811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720
ES.18019.9	chr19	+	3602	21	ISM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	-8	-373	-8	15	intron_retention	FALSE	canonical	3	47	junction_12	7.93268554778267	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGGAAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	46294126	46300839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019
ES.1802.1	chr1	-	5726	5	ISM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	717	-1837	717	1832	3prime_fragment	FALSE	canonical	3	43	junction_3	2.77263412660235	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTTTATGATGAGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	165954748	165923884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638
ES.1802.10	chr1	-	6877	5	ISM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	-2242	2	-2242	-2	intron_retention	FALSE	canonical	3	43	junction_3	2.77263412660235	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165957733	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638
ES.1802.11	chr1	-	1650	2	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	697	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCTTCATTCTGGT	NA	False	NA	-6	True	ATTAAA	-14	NA	165954768	165925721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165927308_165954704
ES.1802.14	chr1	-	3909	5	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	-12052	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.4984755530747	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATATTTCTTCATTCTG	NA	False	NA	-8	True	ATTAAA	-12	NA	165967543	165925723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165967411
ES.1802.16	chr1	-	929	6	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	693	-7330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.3015694514983	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGATGGCAAATGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	165954772	165933051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165933202_165933626_165933727_165935541_165935760_165937620_165937853_165939599_165939695_165954638
ES.1802.17	chr1	-	208	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACACCAAACACTC	6073	False	NA	NA	False	NA	NA	NA	165942463	165942255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165942300_165942500
ES.1802.18	chr1	-	3521	2	ISM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	-5	25667	-5	-25662	5prime_fragment	FALSE	canonical	1	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	165955496	165951383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_165954769_165955360
ES.1802.2	chr1	-	3934	5	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	-8549	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.4984755530747	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATTCTGGTCATTTCC	NA	False	NA	1	True	ATTAAA	-21	NA	165964040	165925714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165963892
ES.1802.3	chr1	-	4177	7	NNC	ENSMUSG00000026564.10	novel	4018	6	NA	NA	-12064	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.2341444115106	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCATTCTGGTCATT	NA	False	NA	-2	True	ATTAAA	-18	NA	165967555	165925717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360_165955477_165967411
ES.1802.4	chr1	-	3885	5	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	695	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.7610728453695	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165954770	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937649_165937853_165939599_165939695_165954638
ES.1802.5	chr1	-	3706	4	NIC	ENSMUSG00000026564.10	novel	4018	6	NA	NA	685	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.5101600838869	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165954780	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_165928956_165937620_165937853_165939599_165939695_165954638
ES.1802.6	chr1	-	4028	5	NNC	ENSMUSG00000026564.10	novel	4045	6	NA	NA	-10639	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.4984755530747	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165966130	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165965884
ES.1802.7	chr1	-	4345	9	NNC	ENSMUSG00000026564.10	novel	4018	6	NA	NA	-7336	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.8527897640529	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165962827	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360_165955477_165961451_165961627_165962129_165962169_165962728
ES.1802.9	chr1	-	4136	7	NNC	ENSMUSG00000026564.10	novel	4018	6	NA	NA	-10497	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	20.9900770206622	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCATTCTGGTCAT	NA	False	NA	-3	True	ATTAAA	-17	NA	165965988	165925718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360_165955477_165965884
ES.18020.1	chr19	+	1115	3	ISM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	377	0	377	0	3prime_fragment	FALSE	canonical	3	21	junction_2	5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6693	False	NA	8	True	AATAAA	-17	NA	46317002	46318884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46317268_46317526_46318033_46318540
ES.18020.2	chr19	+	743	1	NIC	ENSMUSG00000025226.12	novel	1348	4	NA	NA	1516	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	7832	False	NA	8	True	AATAAA	-17	NA	46318141	46318884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46318100_46318900
ES.18021.1	chr19	-	1209	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	356.842566524722	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5830	False	NA	-3	True	AGTAAA	-18	NA	46327091	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
ES.18021.12	chr19	-	1252	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	336.420298561116	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5831	False	NA	-3	True	AGTAAA	-18	NA	46327090	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
ES.18021.13	chr19	-	1228	11	NNC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	467.051003638789	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5862	False	NA	-3	True	AGTAAA	-18	NA	46327059	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46324760_46324861_46326751_46326870_46327007
ES.18021.14	chr19	-	1203	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	87	junction_5	400.438925846793	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5847	False	NA	-3	True	AGTAAA	-18	NA	46327074	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
ES.18021.17	chr19	-	1067	9	NIC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	390	junction_8	277.077155319597	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5805	False	NA	-3	True	AGTAAA	-18	NA	46327116	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ES.18021.19	chr19	-	1418	8	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	415	junction_7	220.891514604997	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5847	False	NA	-3	True	AGTAAA	-18	NA	46327074	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320258_46320351_46320496_46321056_46321141_46326751
ES.18021.22	chr19	-	1169	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	349.486642921081	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5860	False	NA	-3	True	AGTAAA	-18	NA	46327061	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
ES.18021.24	chr19	-	1197	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	-27	-3	3	-1	multi-exon	FALSE	canonical	3	29	junction_9	358.309542707226	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5847	False	NA	-3	True	AGTAAA	-18	NA	46327074	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
ES.18021.26	chr19	-	5573	8	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	1345	-2	1345	-2	3prime_fragment	FALSE	canonical	3	536	junction_5	179.49521055517	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCATTCTGCTCAT	7219	False	NA	-4	True	AGTAAA	-17	NA	46325702	46318980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056
ES.18021.27	chr19	-	7266	5	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	995	junction_1	43.1914343359884	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5862	False	NA	-6	True	AGTAAA	-15	NA	46327059	46318982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46320258_46320351_46320496_46321056
ES.18021.28	chr19	-	4345	9	NNC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_8	449.369262828467	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5858	False	NA	-6	True	AGTAAA	-15	NA	46327063	46318982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320075_46320195_46320258_46320351_46320496_46321056_46321856_46324404
ES.18021.29	chr19	-	1304	9	NNC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	-9	0	intron_retention	FALSE	canonical	1	2	junction_5	374.460862440923	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5835	False	NA	-8	True	AGTAAA	-13	NA	46327086	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320075_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ES.18021.30	chr19	-	1134	10	NNC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	417.209513048034	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5897	False	NA	-8	True	AGTAAA	-13	NA	46327024	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319555_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
ES.18021.32	chr19	-	1145	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	365.48266750547	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5830	False	NA	-8	True	AGTAAA	-13	NA	46327091	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
ES.18021.34	chr19	-	2155	7	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	5320	2	-447	0	intron_retention	FALSE	canonical	3	536	junction_5	184.016982911904	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	6715	False	NA	-8	True	AGTAAA	-13	NA	46321727	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351
ES.18021.36	chr19	-	1226	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	344.205723727706	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5862	False	NA	-8	True	AGTAAA	-13	NA	46327059	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
ES.18021.37	chr19	-	1049	9	NIC	ENSMUSG00000036748.17	novel	999	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_5	402.535072229738	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5836	False	NA	-8	True	AGTAAA	-13	NA	46327085	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ES.18021.39	chr19	-	1193	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	380.445937172565	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5882	False	NA	-8	True	AGTAAA	-13	NA	46327039	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
ES.18021.4	chr19	-	1212	8	NIC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	390	junction_7	285.813125760772	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5836	False	NA	-3	True	AGTAAA	-18	NA	46327085	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ES.18021.40	chr19	-	4272	10	NNC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	475.890224918352	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5862	False	NA	-8	True	AGTAAA	-13	NA	46327059	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320096_46320195_46320258_46320351_46320496_46321056_46321783_46324330_46326870_46326958
ES.18021.42	chr19	-	1294	9	NIC	ENSMUSG00000036748.17	novel	999	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	413	junction_5	271.660605121538	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5829	False	NA	-8	True	AGTAAA	-13	NA	46327092	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ES.18021.43	chr19	-	1163	8	NIC	ENSMUSG00000036748.17	novel	999	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	133	junction_7	318.334953872714	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5838	False	NA	-8	True	AGTAAA	-13	NA	46327083	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320258_46320351_46320496_46321056_46321138_46327007
ES.18021.44	chr19	-	3468	9	NNC	ENSMUSG00000036748.17	novel	999	9	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_8	375.288472378249	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	5881	False	NA	-8	True	AGTAAA	-13	NA	46327040	46318984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46324525
ES.18021.45	chr19	-	4346	9	NNC	ENSMUSG00000036748.17	novel	999	9	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	375.288472378249	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTATATGCTCATTCTG	5836	False	NA	-9	True	AGTAAA	-12	NA	46327085	46318985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321787_46324337
ES.18021.46	chr19	-	1326	9	NNC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	8	-4	intron_retention	FALSE	canonical	0	0	junction_5	375.012666452748	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	5830	False	NA	-12	True	AGTAAA	-9	NA	46327091	46318988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320096_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ES.18021.49	chr19	-	1298	8	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	18	-4	intron_retention	FALSE	canonical	3	413	junction_4	285.893015525967	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	5892	False	NA	-12	True	AGTAAA	-9	NA	46327029	46318988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ES.18021.50	chr19	-	1045	9	NNC	ENSMUSG00000036748.17	novel	1833	9	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	393.089048435593	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	5830	False	NA	-12	True	AGTAAA	-9	NA	46327091	46318988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46319274_46319358_46319432_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ES.18021.51	chr19	-	1295	9	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	89	junction_8	350.824542150346	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	5872	False	NA	-12	True	AGTAAA	-9	NA	46327049	46318988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
ES.18021.53	chr19	-	1200	10	NIC	ENSMUSG00000036748.17	novel	1167	10	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	3	87	junction_5	439.947976722501	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	5848	False	NA	-12	True	AGTAAA	-9	NA	46327073	46318988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326870_46326958
ES.18021.6	chr19	-	1141	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	122	junction_9	349.700542086801	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5830	False	NA	-3	True	AGTAAA	-18	NA	46327091	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
ES.18021.7	chr19	-	1165	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	-61	729	-19	-1	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCATTCTGCTCATT	5761	False	NA	-3	True	AGTAAA	-18	NA	46327160	46318979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ES.18022.1	chr19	+	2408	9	NNC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	-420	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.7953811348783	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	3778	False	NA	13	True	AGTAAA	-13	NA	46344898	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345134_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.11	chr19	+	2309	8	NIC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	169	junction_1	31.2932150173556	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4241	False	NA	13	True	AGTAAA	-13	NA	46345361	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360815_46362884
ES.18022.12	chr19	+	2152	8	NIC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	79.7222218271745	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4241	False	NA	13	True	AGTAAA	-13	NA	46345361	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46345424_46354749_46354993_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.13	chr19	+	1636	6	ISM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	-11	5344	-11	1930	5prime_fragment	FALSE	canonical	3	169	junction_1	36.7728160466397	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTTTTCGA	4242	False	NA	NA	False	ATTAAA	-14	NA	46345362	46358347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675
ES.18022.14	chr19	+	4836	8	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	3	intron_retention	FALSE	canonical	0	0	junction_3	84.9215724618177	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGGTCTGTGCCGTGT	4242	False	NA	16	True	AGTAAA	-16	NA	46345362	46363694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46354993_46355648_46355734_46356152_46356601_46356704_46356829_46357675_46360547_46360620_46360815_46362884
ES.18022.15	chr19	+	4918	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	2	intron_retention	FALSE	canonical	1	1	junction_1	96.1691218635171	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4242	False	NA	15	True	AGTAAA	-15	NA	46345362	46363693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350895_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46360547_46360620_46360815_46362884
ES.18022.16	chr19	+	2892	8	NIC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	2	intron_retention	FALSE	canonical	3	169	junction_1	31.2932150173556	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4242	False	NA	15	True	AGTAAA	-15	NA	46345362	46363693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46345424_46354749_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.17	chr19	+	2203	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.1507085612935	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4242	False	NA	13	True	AGTAAA	-13	NA	46345362	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360651_46360815_46362884
ES.18022.18	chr19	+	2513	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.461224577475	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4242	False	NA	13	True	AGTAAA	-13	NA	46345362	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345576_46350784_46350976_46353415_46353524_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
ES.18022.19	chr19	+	2419	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.5300066423299	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4242	False	NA	13	True	AGTAAA	-13	NA	46345362	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355734_46356155_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.2	chr19	+	2280	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	3	-5	3	5	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTCTGTGCCGTGTGT	4201	False	NA	18	True	AGTAAA	-18	NA	46345321	46363696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.20	chr19	+	2294	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	81.7288772405445	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTCTTTGGGTCTGTGC	4243	False	NA	11	True	AGTAAA	-11	NA	46345363	46363689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360311_46360547_46360620_46360815_46362884
ES.18022.21	chr19	+	5710	11	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.826592610076	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTGGGTCTGTGCCGT	4243	False	NA	14	True	AGTAAA	-14	NA	46345363	46363692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46346443_46348309_46348355_46348565_46350976_46354749_46354993_46355646_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.25	chr19	+	6963	6	ISM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	8	-2	4	2	intron_retention	FALSE	canonical	3	169	junction_1	36.7728160466397	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4261	False	NA	15	True	AGTAAA	-15	NA	46345381	46363693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675
ES.18022.26	chr19	+	2351	8	NNC	ENSMUSG00000025227.15	novel	2051	8	NA	NA	5	0	intron_retention	FALSE	canonical	2	2	junction_6	85.0872301505571	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4262	False	NA	13	True	AGTAAA	-13	NA	46345382	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360311_46360815_46362884
ES.18022.27	chr19	+	2082	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.1507085612935	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTCTTTGGGTCTGTGC	4266	False	NA	11	True	AGTAAA	-11	NA	46345386	46363689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360746_46360815_46362884
ES.18022.28	chr19	+	2534	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.075731506389	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4267	False	NA	13	True	AGTAAA	-13	NA	46345387	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350646_46350976_46354749_46354993_46355648_46355732_46356147_46356597_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.29	chr19	+	2289	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	91.7654013715893	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4267	False	NA	13	True	AGTAAA	-13	NA	46345387	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350895_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.3	chr19	+	2865	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	81.1507085612935	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4211	False	NA	13	True	AGTAAA	-13	NA	46345331	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46354749_46355148_46355203_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.30	chr19	+	2364	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	75	-161	16	161	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAACCTGGTGATTTT	4273	False	NA	NA	False	GATAAA	-13	NA	46345393	46363852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.31	chr19	+	2348	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.7953811348783	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4280	False	NA	13	True	AGTAAA	-13	NA	46345400	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345576_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.32	chr19	+	2537	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	91.533168784077	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4282	False	NA	13	True	AGTAAA	-13	NA	46345402	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345576_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.33	chr19	+	2341	9	NNC	ENSMUSG00000025227.15	novel	2223	9	NA	NA	1720	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	105.524878583204	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTCTTTGGGTCTGTGC	5977	False	NA	11	True	AGTAAA	-11	NA	46347097	46363689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46347160_46350784_46350976_46354749_46354993_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.34	chr19	+	2485	10	NNC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	1844	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9981212905332	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	6101	False	NA	13	True	AGTAAA	-13	NA	46347221	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46347343_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.35	chr19	+	5122	10	NNC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	2442	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	91.9981212905332	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTCTGTGCCGTGTGT	6699	False	NA	18	True	AGTAAA	-18	NA	46347819	46363696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46348365_46348576_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.36	chr19	+	4405	9	NNC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	-2861	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.7953811348783	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	3238	False	NA	13	True	AGTAAA	-13	NA	46352311	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46352769_46352974_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.37	chr19	+	6125	3	NIC	ENSMUSG00000025227.15	novel	2234	6	NA	NA	225	5	intron_retention	FALSE	canonical	3	197	junction_1	19.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTCTGTGCCGTGTGT	6324	False	NA	18	True	AGTAAA	-18	NA	46355397	46363696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46356601_46356704_46360815_46362884
ES.18022.4	chr19	+	1761	6	NIC	ENSMUSG00000025227.15	novel	2051	8	NA	NA	26	7	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	109.112052496505	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTCTGTGCCGTGTGTGT	4224	False	NA	20	True	AGTAAA	-20	NA	46345344	46363698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46345424_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
ES.18022.5	chr19	+	2080	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	-29	0	26	0	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4224	False	NA	13	True	AGTAAA	-13	NA	46345344	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
ES.18022.6	chr19	+	4922	7	NIC	ENSMUSG00000025227.15	novel	2051	8	NA	NA	-21	2	intron_retention	FALSE	canonical	3	169	junction_1	33.7511316682699	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4232	False	NA	15	True	AGTAAA	-15	NA	46345352	46363693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46360815_46362884
ES.18022.7	chr19	+	2351	9	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	98.7217522889459	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGGTCTGTGCCGTG	4235	False	NA	15	True	AGTAAA	-15	NA	46345355	46363693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.8	chr19	+	2437	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTCTGTGCCGTGTGT	4235	False	NA	18	True	AGTAAA	-18	NA	46345355	46363696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ES.18022.9	chr19	+	2489	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	101.43136096718	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4241	False	NA	13	True	AGTAAA	-13	NA	46345361	46363691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360311_46360547_46360620_46360815_46362884
ES.18023.1	chr19	-	175	1	Intergenic	novelGene_14949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTTAAAAAA	1696	False	NA	NA	False	NA	NA	NA	46348566	46348391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46348400_46348600
ES.18024.1	chr19	-	3772	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	-7	-1008	-6	1008	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGCTCATTGGCCGG	NA	False	NA	NA	False	AATAAA	-13	NA	46384193	46364241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18024.11	chr19	-	2652	10	NIC	ENSMUSG00000025228.6	novel	2757	11	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	94.7270282260729	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATCAGTCTGACCTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	46384179	46365254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18024.12	chr19	-	215	1	Intergenic	novelGene_14950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAAATT	1088	False	NA	NA	False	NA	NA	NA	46379879	46379664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46379700_46379900
ES.18024.2	chr19	-	2784	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	-25	-2	-24	2	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGACCTCTTTCTGTGA	NA	False	NA	0	True	AATAAA	-21	NA	46384211	46365247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18024.5	chr19	-	2695	11	NNC	ENSMUSG00000025228.6	novel	2757	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	91.7159201011471	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTCTGACCTCTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	46384189	46365252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369511_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18024.7	chr19	-	4490	9	NIC	ENSMUSG00000025228.6	novel	2757	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_3	20.9370335768943	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTCTGACCTCTTTC	NA	False	NA	-5	True	AATAAA	-16	NA	46384187	46365252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18024.8	chr19	-	3317	10	NIC	ENSMUSG00000025228.6	novel	2757	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	273	junction_3	20.2155056000751	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAGTCTGACCTCTTT	NA	False	NA	-6	True	AATAAA	-15	NA	46384175	46365253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ES.18025.1	chr19	+	4393	11	NNC	ENSMUSG00000025231.18	novel	1747	12	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.9701423206091	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTGAGTTGTGTGCT	NA	False	NA	12	True	ATTAAA	-12	NA	46385328	46477236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443290_46463946_46464086_46472038_46472108_46474293
ES.18025.10	chr19	+	4509	12	NNC	ENSMUSG00000025231.18	novel	1747	12	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.4872280534024	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGAGTTGTGTGCTTC	NA	False	NA	14	True	ATTAAA	-14	NA	46385384	46477238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472147_46474293
ES.18025.11	chr19	+	2064	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	63	2395	41	361	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACATAGTGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	46385397	46474848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ES.18025.13	chr19	+	3313	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	52	-1618	-34	-1138	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACAGAGTTAGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	46385408	46476105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ES.18025.14	chr19	+	4516	13	NNC	ENSMUSG00000025231.18	novel	4522	12	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	34.0644813389091	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGCCTGAGTTGTGT	NA	False	NA	9	True	ATTAAA	-9	NA	46385431	46477233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46472722_46472824_46474293
ES.18025.16	chr19	+	1677	1	Intergenic	novelGene_14954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46449892	46451569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46449900_46451600
ES.18025.17	chr19	+	175	1	Intergenic	novelGene_14955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	46450540	46450715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46450500_46450700
ES.18025.2	chr19	+	4522	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	-1	1	-1	-1	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGTGTGCTTCTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	46385333	46477242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ES.18025.4	chr19	+	2788	10	ISM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	-12	9110	10	-16	5prime_fragment	FALSE	canonical	3	32	junction_6	20.7691604233623	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGGTAACGTTAGATT	NA	False	NA	NA	False	TATAAA	-16	NA	46385344	46465377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946
ES.18025.5	chr19	+	1226	7	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-119	23519	-11	-608	5prime_fragment	FALSE	canonical	3	63	junction_6	13.5123400391395	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGAGCATTATTGGCC	NA	False	NA	NA	False	AATGAA	-22	NA	46385345	46441874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600
ES.18025.6	chr19	+	6308	11	NNC	ENSMUSG00000025231.18	novel	4522	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_3	28.559411758648	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGTGTGCTTCTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	46385346	46477242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46385724_46389562_46389698_46413437_46413575_46438269_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46464086_46472038_46472108_46474293
ES.18025.7	chr19	+	1758	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	14	2750	-8	6	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAGAGTGCCACACCCA	NA	False	NA	NA	False	AATAAA	-19	NA	46385348	46474493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ES.18025.8	chr19	+	1816	7	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-108	22918	0	-7	5prime_fragment	FALSE	canonical	3	63	junction_6	13.5123400391395	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATACCTGACTTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	46385356	46442475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600
ES.18025.9	chr19	+	2044	8	ISM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	-89	21252	19	-5	5prime_fragment	FALSE	canonical	3	63	junction_6	13.1413042560859	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCAATCTGACTGCAT	NA	False	NA	NA	False	AATAAA	-11	NA	46385375	46444141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173
ES.18026.1	chr19	-	132	1	Intergenic	novelGene_14951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCTACAGTGTACTT	5003	False	NA	NA	False	NA	NA	NA	46390736	46390604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46390600_46390700
ES.18027.1	chr19	-	174	1	Intergenic	novelGene_14952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	46419100	46418926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46418900_46419100
ES.18028.1	chr19	-	174	1	Intergenic	novelGene_14953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	46428081	46427907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46427900_46428100
ES.18029.1	chr19	+	4042	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-849	387	-849	-387	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGTGGAGGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	46489291	46504900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.11	chr19	+	3387	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-234	-391	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_1	370.673441185095	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCCTTGTGGAGGTC	NA	False	NA	NA	False	NA	NA	NA	46489906	46504896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491417_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.13	chr19	+	3812	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-215	-17	-215	17	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCCCTGGCATCTCT	NA	False	NA	NA	False	AATAAA	-38	NA	46489925	46505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.14	chr19	+	3846	4	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-212	404	-212	-404	intron_retention	FALSE	canonical	0	0	junction_1	500.16086301198	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACAAGAGCACAGC	NA	False	NA	NA	False	NA	NA	NA	46489928	46504883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891
ES.18029.15	chr19	+	4507	5	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-212	-396	intron_retention	FALSE	canonical	0	0	junction_1	466.050091191923	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCACAGCCCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	46489928	46504891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501161_46501258_46501546_46502924_46503060_46503177_46503497
ES.18029.17	chr19	+	4803	3	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-141	487	-141	-487	intron_retention	FALSE	canonical	0	0	junction_1	530	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTGCCAATGATAGT	NA	False	NA	NA	False	AAGAAA	-44	NA	46489999	46504800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46491453_46501161_46501258_46501546
ES.18029.18	chr19	+	2812	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-10	-491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.78041839527	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTTTGCCAATGA	NA	False	NA	NA	False	AAGAAA	-40	NA	46490130	46504796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503784
ES.18029.19	chr19	+	2974	7	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-8	-523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	505.47285343088	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	46490132	46504764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497_46504438_46504528
ES.18029.20	chr19	+	3326	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-6	-393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.290985754651	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGCCCTTGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	46490134	46504894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503364
ES.18029.21	chr19	+	4489	4	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	0	-523	intron_retention	FALSE	canonical	0	0	junction_1	494.129087947224	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	46490140	46504764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501161_46501258_46501546_46502924_46503060
ES.18029.22	chr19	+	3182	4	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	3	-436	intron_retention	FALSE	canonical	0	0	junction_1	516.12207858219	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	46490143	46504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501546_46501781_46502891_46503177_46503497
ES.18029.23	chr19	+	2852	7	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	21	-436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	505.47285343088	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	46490161	46504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46490356_46490626_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.25	chr19	+	3367	5	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	44	490	44	-490	intron_retention	FALSE	canonical	0	0	junction_1	455.932834965853	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACTTTGCCAATGAT	NA	False	NA	NA	False	AAGAAA	-41	NA	46490184	46504797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060
ES.18029.26	chr19	+	2982	5	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	50	-452	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	466.324122794436	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAATAATATTAATA	NA	False	NA	NA	False	NA	NA	NA	46490190	46504835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.28	chr19	+	3047	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	123	-489	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	524.842223911148	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACTTTGCCAATGATA	NA	False	NA	NA	False	AAGAAA	-42	NA	46490263	46504798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491453_46501161_46501258_46501546_46501781_46502812_46502924_46503060_46503177_46503497
ES.18029.29	chr19	+	4319	2	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	596	523	596	-523	intron_retention	FALSE	canonical	0	0	junction_1	0	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	46490736	46504764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46491453_46501161
ES.18029.3	chr19	+	3375	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-351	-436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.78041839527	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	46489789	46504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503137_46503577
ES.18029.31	chr19	+	2379	6	NNC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	640	-525	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_1	370.673441185095	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	46490780	46504762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46491417_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.33	chr19	+	2198	5	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	1144	-527	intron_retention	FALSE	canonical	0	0	junction_1	466.324122794436	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	46491284	46504760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501161_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.34	chr19	+	1959	7	NNC	ENSMUSG00000025034.10	novel	406	2	NA	NA	2278	-439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	505.47285343088	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAATAATAATAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	46492418	46504848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46492447_46493760_46493863_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.35	chr19	+	6999	5	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	5854	436	5854	-436	3prime_fragment	FALSE	canonical	3	1036	junction_3	32.9497723816114	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	46495994	46504851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.36	chr19	+	3714	4	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-3597	-503	intron_retention	FALSE	canonical	3	1036	junction_2	37.3660570869101	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-28	NA	46499501	46504784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46501781_46502891_46502924_46503060_46503177_46503497
ES.18029.6	chr19	+	4770	4	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	-278	-488	intron_retention	FALSE	canonical	0	0	junction_1	510.646866456872	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACTTTGCCAATGATAG	NA	False	NA	NA	False	AAGAAA	-43	NA	46489862	46504799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46491453_46501161_46502924_46503060_46503177_46503497
ES.18029.8	chr19	+	3358	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	-266	488	-266	-488	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACTTTGCCAATGATAG	NA	False	NA	NA	False	AAGAAA	-43	NA	46489874	46504799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ES.1803.1	chr1	-	157	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAATAA	7039	False	NA	NA	False	NA	NA	NA	165996328	165996171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_165996200_165996300
ES.18030.1	chr19	-	1197	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46490372	46489175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46489200_46490400
ES.18030.10	chr19	-	4189	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	46503763	46499574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46499600_46503800
ES.18030.11	chr19	-	3311	5	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	46504741	46499574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46501256_46501544_46501779_46502889_46502929_46503063_46503175_46503495
ES.18030.2	chr19	-	3087	6	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	46504741	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501256_46501544_46501779_46502889_46502922_46503059_46503175_46503495
ES.18030.3	chr19	-	3090	6	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	46504741	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501256_46501544_46501779_46502889_46502929_46503063_46503175_46503495
ES.18030.5	chr19	-	3089	6	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	46504741	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501249_46501538_46501779_46502889_46502929_46503063_46503175_46503495
ES.18030.6	chr19	-	4694	1	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	8906	False	NA	NA	False	NA	NA	NA	46494780	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46490100_46494800
ES.18030.7	chr19	-	3089	5	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	46504741	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501256_46501544_46501805_46503050_46503174_46503495
ES.18030.8	chr19	-	3679	3	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGAGAGGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	46503763	46490086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501256_46501544
ES.18030.9	chr19	-	2081	5	Antisense	novelGene_ENSMUSG00000025034.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-27	NA	46503763	46490107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46491451_46501159_46501256_46501544_46501795_46503050_46503175_46503495
ES.18031.1	chr19	+	3459	2	Antisense	novelGene_ENSMUSG00000025035.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCGGTGGTAGGTCA	NA	False	NA	NA	False	NA	NA	NA	46530934	46534606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_46533884_46534096
ES.18032.1	chr19	-	6400	1	Genic_Genomic	ENSMUSG00000025035.10	novel	NA	NA	NA	NA	8152	2834	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGGTCTTGGAGTGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	46523100	46516700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_46516700_46523100
ES.18032.10	chr19	-	138	1	Intergenic	novelGene_14961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	3873	False	NA	NA	False	NA	NA	NA	46554914	46554776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46554800_46554900
ES.18032.11	chr19	-	348	1	Intergenic	novelGene_14962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTTCCAGGCCAGTC	NA	False	NA	NA	False	NA	NA	NA	46560170	46559822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46559800_46560200
ES.18032.12	chr19	-	158	1	Intergenic	novelGene_14963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	46560172	46560014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46560000_46560200
ES.18032.2	chr19	-	959	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-121	5	-16	-5	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGTATTAAATGTCTCA	NA	False	NA	-26	True	AATAAA	-30	NA	46561653	46519539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ES.18032.3	chr19	-	4454	1	Intergenic	novelGene_14956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCTGCAGCCGTGA	NA	False	NA	NA	False	NA	NA	NA	46528572	46524118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46524100_46528600
ES.18032.4	chr19	-	2820	2	Intergenic	novelGene_14957	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46527220	46524192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46525114_46525321
ES.18032.5	chr19	-	177	2	Intergenic	novelGene_14958	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46527676	46525142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46525240_46527596
ES.18032.6	chr19	-	214	1	Intergenic	novelGene_14959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46527677	46527463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46527500_46527700
ES.18032.7	chr19	-	3644	5	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	15	8149	-2	2850	5prime_fragment	FALSE	canonical	3	267	junction_4	28.3317401512862	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGGGCTGGTGAGATG	NA	False	NA	NA	False	NA	NA	NA	46561517	46527683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ES.18032.8	chr19	-	260	3	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	-8	20540	-8	-9541	5prime_fragment	FALSE	canonical	3	267	junction_2	30.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCGGGCAGAGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	46561540	46540074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_46540129_46546676_46546821_46561478
ES.18032.9	chr19	-	174	1	Intergenic	novelGene_14960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAAAATATG	NA	False	NA	NA	False	NA	NA	NA	46544430	46544256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46544300_46544400
ES.18033.1	chr19	+	1622	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	-10	1593	-8	-1593	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACCAAAACAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	46561795	46583741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.10	chr19	+	2157	13	NNC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.6657196663966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACATGAAACACTGTC	NA	False	NA	8	True	AATAAA	-8	NA	46561830	46585327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583798_46584813
ES.18033.11	chr19	+	2015	13	NNC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.6657196663966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACACTGTCTGCAAAC	NA	False	NA	15	True	AATAAA	-15	NA	46561866	46585334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583730_46584858
ES.18033.12	chr19	+	3036	11	NIC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	73	0	intron_retention	FALSE	canonical	0	0	junction_3	14.4692777981487	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGTCTGCAAACTAA	NA	False	NA	18	True	AATAAA	-18	NA	46561878	46585337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46561899_46570922_46571103_46571245_46571417_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.3	chr19	+	1497	11	ISM	ENSMUSG00000025036.8	ENSMUST00000236845.2	1655	12	-2	2797	-2	-1626	5prime_fragment	FALSE	canonical	1	1	junction_5	15.4094127078224	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	46561801	46583708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.4	chr19	+	3015	12	NIC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	1	-1628	intron_retention	FALSE	canonical	1	1	junction_6	15.0596609666271	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	46561804	46583706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46578186_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.5	chr19	+	1409	13	NIC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	13.4440713906002	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGTCTGCAAACTAA	NA	False	NA	18	True	AATAAA	-18	NA	46561805	46585337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583308_46585106
ES.18033.6	chr19	+	1299	13	NNC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	11	-1985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.7053171287976	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGGAAGATGGTTCCT	NA	False	NA	NA	False	AATAGA	-13	NA	46561816	46583349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46561899_46569802_46569893_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.7	chr19	+	3645	10	FSM	ENSMUSG00000025036.8	ENSMUST00000237310.2	5253	10	13	1595	11	-1593	multi-exon	FALSE	canonical	3	36	junction_8	7.15610763915761	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACCAAAACAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	46561816	46583741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18033.8	chr19	+	1487	13	NNC	ENSMUSG00000025036.8	novel	3205	12	NA	NA	18	-1631	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	14.6657196663966	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCTCAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	46561823	46583703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110_46583560_46583628
ES.18033.9	chr19	+	3190	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	18	-3	18	0	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGTCTGCAAACTAA	NA	False	NA	18	True	AATAAA	-18	NA	46561823	46585337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ES.18034.1	chr19	+	3972	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	-53	-8	-23	1	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCGCTCCTTGTTCC	NA	False	NA	25	True	AATAAA	-26	NA	46587499	46645829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.10	chr19	+	5251	4	ISM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	-8	-3	-7	0	intron_retention	FALSE	canonical	3	116	junction_1	21.0449254902195	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTCCTGCCGCTCCTT	NA	False	NA	20	True	AATAAA	-21	NA	46587544	46645824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912
ES.18034.11	chr19	+	3798	4	NNC	ENSMUSG00000047731.18	novel	3900	4	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.7329776906415	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	46587546	46645826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46632791_46632895_46640912_46641075_46642479
ES.18034.12	chr19	+	5178	5	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	63.0257883726971	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATCTCCTGCCGCTC	NA	False	NA	17	True	AATAAA	-18	NA	46587546	46645821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641292_46641359
ES.18034.13	chr19	+	3864	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2174798466343	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	24	True	AATAAA	-25	NA	46587546	46645828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587619_46587678_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.14	chr19	+	2280	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	-5	1636	-4	-1636	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTTGTTTTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	46587547	46644185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.15	chr19	+	3799	5	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.5899952822769	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAATCTCCTGCCGCTCCT	NA	False	NA	19	True	AATAAA	-20	NA	46587547	46645823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587615_46587685_46587733_46632791_46632895_46640912_46641075_46642403
ES.18034.16	chr19	+	3848	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2174798466343	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTCCTGCCGCTCCTT	NA	False	NA	20	True	AATAAA	-21	NA	46587547	46645824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587615_46587685_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.17	chr19	+	3940	5	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	53.2934095362644	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATCTCCTGCCGCTC	NA	False	NA	17	True	AATAAA	-18	NA	46587547	46645821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46632791_46632895_46633182_46633255_46640912_46641075_46642403
ES.18034.18	chr19	+	1391	5	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	9	1100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.0257883726971	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGCTCTAAGCGAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	46587571	46642061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641300_46641369
ES.18034.19	chr19	+	4051	4	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	12	21644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.6675977580983	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTTCTACTTTACT	NA	False	NA	NA	False	AATAAA	-16	NA	46587574	46667472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46663730
ES.18034.2	chr19	+	4079	5	NIC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	53.5583793630838	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	24	True	AATAAA	-25	NA	46587503	46645828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46587733_46595150_46595199_46632791_46633007_46640912_46641075_46642403
ES.18034.20	chr19	+	3953	4	FSM	ENSMUSG00000047731.18	ENSMUST00000132202.3	3979	4	26	0	15	0	multi-exon	FALSE	canonical	1	4	junction_2	51.03593505234	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTCCTGCCGCTCCTT	NA	False	NA	20	True	AATAAA	-21	NA	46587577	46645824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46632791_46633007_46640912_46641075_46642403
ES.18034.21	chr19	+	2337	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	60	1514	50	-1514	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCCTGTGTAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	46587612	46644307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.22	chr19	+	3873	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	105	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.1140885790011	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	46587667	46645826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46633182_46633255_46640912_46641075_46642403
ES.18034.23	chr19	+	2500	5	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	116	-1209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.0257883726971	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCGTGTCTGCATTTGGA	NA	False	NA	41	True	NA	NA	NA	46587678	46644612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642479
ES.18034.24	chr19	+	3816	4	FSM	ENSMUSG00000047731.18	ENSMUST00000111855.5	3865	4	46	3	46	0	multi-exon	FALSE	canonical	0	0	junction_1	71.4718281718204	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATCTCCTGCCGCTC	NA	False	NA	17	True	AATAAA	-18	NA	46611885	46645821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46612019_46632791_46632895_46640912_46641075_46642403
ES.18034.3	chr19	+	3911	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	-10	-1	-10	1	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCGCTCCTTGTTCC	NA	False	NA	25	True	AATAAA	-26	NA	46587512	46645829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
ES.18034.4	chr19	+	2735	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	0	1165	0	-1158	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTCTACACAGTGATG	NA	False	NA	92	True	NA	NA	NA	46587522	46644663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
ES.18034.6	chr19	+	3889	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2174798466343	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	24	True	AATAAA	-25	NA	46587539	46645828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587626_46587667_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.7	chr19	+	1384	4	NNC	ENSMUSG00000047731.18	novel	3900	4	NA	NA	-10	1111	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	68.7329776906415	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGAGGTGATCCGCCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	46587541	46642072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46632791_46632895_46640912_46641300_46641369
ES.18034.8	chr19	+	2762	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	-9	1158	-8	-1158	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGTCTACACAGTGATG	NA	False	NA	92	True	NA	NA	NA	46587543	46644663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ES.18034.9	chr19	+	3829	6	NNC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	-8	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	57.2174798466343	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCCTGCCGCTCCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	46587543	46645826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403_46644806_46644901
ES.18035.1	chr19	+	580	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	1	1595	1	-1595	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCGTGAAAAGAAGAAGC	9072	False	NA	NA	False	NA	NA	NA	46678345	46690226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ES.18035.2	chr19	+	809	5	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	1	-1484	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	74.0553002829642	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAGGTACCTCA	9072	False	NA	NA	False	AATAAA	-21	NA	46678345	46690337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46678643_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ES.18035.3	chr19	+	2164	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	9	3	9	-3	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAATTTAGACCAATCA	9080	False	NA	NA	False	AATAAA	-15	NA	46678353	46691818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ES.18035.4	chr19	+	2198	5	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	11	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.1002628116355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTTATGGATATTGAT	9082	False	NA	NA	False	AATAAA	-30	NA	46678355	46691833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46678525_46687994_46688079_46688176_46688221_46689213_46689235_46689953
ES.18035.5	chr19	+	680	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	12	1484	12	-1484	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAGGTACCTCA	9083	False	NA	NA	False	AATAAA	-21	NA	46678356	46690337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ES.18035.6	chr19	+	562	4	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	16	-1597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.4411853220879	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTCGTGAAAAGAAGAA	9087	False	NA	NA	False	NA	NA	NA	46678360	46690224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46678525_46687994_46688058_46688176_46688241_46689953
ES.18036.1	chr19	+	1768	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	-30	-2	-30	-2	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGTCTGTAGTTTGT	5944	False	NA	32	True	AATAAA	-42	NA	46695866	46729536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ES.18036.10	chr19	+	4528	9	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	27	-3	intron_retention	FALSE	canonical	3	159	junction_5	16.6052514283886	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGATACCACAATGGAT	6001	False	NA	19	True	AATAAA	-29	NA	46695923	46729523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46700730_46703627_46703710_46708327_46708896_46713342_46713478_46728899
ES.18036.11	chr19	+	1592	12	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	58	5321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	70.7866075020755	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCTGTCTCTTTGATC	6032	False	NA	NA	False	NA	NA	NA	46695954	46714181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713924_46714018_46714089_46714148
ES.18036.12	chr19	+	1730	9	FSM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	-38	27	12	-15	multi-exon	FALSE	canonical	3	159	junction_4	13.865424623862	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACCTTGATAATTGAT	6446	False	NA	7	True	AATAAA	-17	NA	46696368	46729511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ES.18036.13	chr19	+	3561	7	NNC	ENSMUSG00000003559.9	novel	1719	9	NA	NA	1988	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.7876382638441	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGATGTCTGTAGTTTG	8472	False	NA	31	True	AATAAA	-41	NA	46698394	46729535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46726951_46727050_46728899
ES.18036.14	chr19	+	959	2	ISM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	16724	27	12720	-15	3prime_fragment	FALSE	canonical	3	165	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACCTTGATAATTGAT	5384	False	NA	7	True	AATAAA	-17	NA	46713130	46729511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46713478_46728899
ES.18036.2	chr19	+	1676	11	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	54.2416813898684	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAATAAAAA	5969	False	NA	-27	True	NA	NA	NA	46695891	46729477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46695968_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ES.18036.3	chr19	+	1707	11	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	70.9055710082078	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAATGGATGTCTGTAGT	5971	False	NA	28	True	AATAAA	-38	NA	46695893	46729532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46695968_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698101_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ES.18036.4	chr19	+	1784	12	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	66.6961780410936	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGTCTGTAGTTTGT	5974	False	NA	32	True	AATAAA	-42	NA	46695896	46729536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46726951_46726998_46728899
ES.18036.5	chr19	+	4584	3	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	1	28564	1	2286	intron_retention	FALSE	canonical	3	182	junction_1	13.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCATTAAAAAGCAGACCA	5975	False	NA	NA	False	NA	NA	NA	46695897	46700970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46695976_46696194_46696239_46696508
ES.18036.6	chr19	+	1667	11	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	74.129953460123	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAATAAAAA	5977	False	NA	-27	True	NA	NA	NA	46695899	46729477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703634_46703710_46708327_46708460_46708752_46708896_46713342_46713476_46728899
ES.18036.7	chr19	+	4640	9	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	159	junction_4	16.8888831779961	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAATAAAAA	5978	False	NA	-27	True	NA	NA	NA	46695900	46729477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ES.18036.9	chr19	+	1591	10	NIC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	58.4636639289739	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGTCTGTAGTTTGT	5986	False	NA	32	True	AATAAA	-42	NA	46695908	46729536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46728899
ES.18037.1	chr19	+	3132	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	-10	1833	-10	-3	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGATCATGTTTTTG	NA	False	NA	26	True	TTTAAA	-22	NA	46750024	46866798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.10	chr19	+	8214	9	Fusion	ENSMUSG00000117814.2_ENSMUSG00000064105.14	novel	4955	8	NA	NA	44	0	multi-exon	FALSE	canonical	0	0	junction_3	39.6151407292717	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGTGTGTTCCCTCTT	NA	False	NA	NA	False	GATAAA	-23	NA	46750087	46871878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr19_+_46751833_46842339_46842484_46845274_46845413_46845605_46845671_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.11	chr19	+	3426	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	45	-420	44	203	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGTTTATCATTGGCA	NA	False	NA	5	True	AATGAA	-18	NA	46750087	46867221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.12	chr19	+	3352	9	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.6151407292717	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACGTGCCAAGTCTGT	NA	False	NA	11	True	AAGAAA	-13	NA	46750087	46867016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46751833_46842339_46842484_46845274_46845413_46845605_46845671_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.13	chr19	+	4385	4	ISM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	45	17062	44	7248	5prime_fragment	FALSE	canonical	0	0	junction_3	49.9799959983992	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCTGTATTGGCTCTA	NA	False	NA	NA	False	AATAAA	-30	NA	46750087	46849739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381
ES.18037.14	chr19	+	8081	7	FSM	ENSMUSG00000117814.2_ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	45	-5075	44	-2	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCTGTGTGTTCCCTC	NA	False	NA	NA	False	GATAAA	-21	NA	46750087	46871876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.16	chr19	+	2864	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	468	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.3681260844415	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	13	True	AAGAAA	-15	NA	46750511	46867018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46751833_46842339_46842484_46845274_46845413_46845605_46845671_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.17	chr19	+	2821	10	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	778	106813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.3468449965255	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAATTTCAGTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	46750821	46975444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271_46867222_46920740_46920774_46975414
ES.18037.18	chr19	+	1127	1	Intergenic	novelGene_14973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATGTGTTTTTCCTT	1402	False	NA	NA	False	CATAAA	-20	NA	46764831	46765958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46764800_46766000
ES.18037.19	chr19	+	1890	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46183	200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCATGGTTTATCATTG	NA	False	NA	2	True	AATGAA	-15	NA	46807915	46867218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.2	chr19	+	3339	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	7	1609	-1	4	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCAAGTCTGTCGTCAC	NA	False	NA	17	True	AAGAAA	-19	NA	46750041	46867022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.20	chr19	+	1333	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46181	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTTTATCGTTTCTT	NA	False	NA	12	True	AATAGA	-18	NA	46807917	46866729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.21	chr19	+	1667	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46165	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.6507474747231	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGTGCCAAGTCTGTC	NA	False	NA	12	True	AAGAAA	-14	NA	46807933	46867017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46808062_46842339_46842484_46845274_46845409_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.22	chr19	+	1603	7	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46162	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.9605850546017	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	13	True	AAGAAA	-15	NA	46807936	46867018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.24	chr19	+	185	1	Intergenic	novelGene_14975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTAAGATCATCCTT	NA	False	NA	NA	False	NA	NA	NA	46829878	46830063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46829900_46830100
ES.18037.25	chr19	+	6362	7	ISM	ENSMUSG00000117814.2_ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	92347	-3247	-11717	0	3prime_fragment	FALSE	canonical	0	0	junction_2	42.2245978863821	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGTGTGTTCCCTCTT	NA	False	NA	NA	False	GATAAA	-23	NA	46842381	46871878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.26	chr19	+	1223	1	Intergenic	novelGene_14976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAATACATGCAGAA	NA	False	NA	NA	False	CATAAA	-29	NA	46862960	46864183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46863000_46864200
ES.18037.27	chr19	+	3837	1	Antisense	novelGene_ENSMUSG00000025041.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	46893250	46897087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_46893200_46897100
ES.18037.28	chr19	+	3392	1	Intergenic	novelGene_14977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTCACC	NA	False	NA	NA	False	NA	NA	NA	46900575	46903967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_46900600_46904000
ES.18037.4	chr19	+	3035	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	4	12	3	-12	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTTTCCAAGAGATC	NA	False	NA	17	True	TTTAAA	-13	NA	46750046	46866789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.5	chr19	+	3263	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	13	-225	12	8	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTCTGTCGTCACTGTG	NA	False	NA	21	True	AAGAAA	-23	NA	46750055	46867026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ES.18037.7	chr19	+	3004	9	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	30	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.1187326365328	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTATCGTTTCTTTC	NA	False	NA	14	True	AATAGA	-20	NA	46750073	46866731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46751833_46842339_46842484_46845274_46845413_46845605_46845671_46847458_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18037.8	chr19	+	1944	2	NNC	ENSMUSG00000064105.14	novel	1941	2	NA	NA	43	-5833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTTGTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	46750086	46836658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_46751833_46836460
ES.18037.9	chr19	+	3492	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	53	1410	44	203	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGTTTATCATTGGCA	NA	False	NA	5	True	AATGAA	-18	NA	46750087	46867221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ES.18038.1	chr19	+	3438	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	-197	-1	-197	1	multi-exon	FALSE	canonical	3	49	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTCGTGCTCTGTGGTC	NA	False	NA	13	True	ATTAAA	-16	NA	47002939	47013767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47004259_47010271_47010397_47011773
ES.18038.2	chr19	+	1759	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	555	926	555	-926	multi-exon	FALSE	canonical	3	49	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	47003691	47012840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47004259_47010271_47010397_47011773
ES.18039.1	chr19	-	4920	3	Intergenic	novelGene_14964	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATTTGGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	46798468	46572087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46572298_46793720_46795391_46795428
ES.18039.10	chr19	-	2531	1	Intergenic	novelGene_14972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTCAT	NA	False	NA	NA	False	NA	NA	NA	46764772	46762241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46762200_46764800
ES.18039.11	chr19	-	182	1	Intergenic	novelGene_14974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAGAAACAC	NA	False	NA	NA	False	NA	NA	NA	46774849	46774667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46774700_46774800
ES.18039.2	chr19	-	1841	1	Intergenic	novelGene_14965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACACAGAAAAAAGATGGT	NA	False	NA	NA	False	NA	NA	NA	46592389	46590548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46590500_46592400
ES.18039.3	chr19	-	182	1	Intergenic	novelGene_14966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	46640098	46639916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46639900_46640100
ES.18039.4	chr19	-	161	1	Intergenic	novelGene_14967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATAAGTT	NA	False	NA	NA	False	NA	NA	NA	46711119	46710958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46711000_46711100
ES.18039.5	chr19	-	180	1	Intergenic	novelGene_14968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACCTTGTAAAACCT	NA	False	NA	NA	False	NA	NA	NA	46712101	46711921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46711900_46712100
ES.18039.6	chr19	-	177	1	Intergenic	novelGene_14969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTCCTCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	46737658	46737481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46737500_46737700
ES.18039.7	chr19	-	177	1	Intergenic	novelGene_14970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGGCTAT	NA	False	NA	NA	False	NA	NA	NA	46744551	46744374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46744400_46744600
ES.18039.8	chr19	-	3819	1	Antisense	novelGene_ENSMUSG00000064105.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGGTCAACTCTAG	9327	False	NA	NA	False	AATAAA	-24	NA	46751928	46748109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46748100_46751900
ES.18039.9	chr19	-	3539	1	Intergenic	novelGene_14971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAATTGCCCACCTTTCT	5870	False	NA	NA	False	NA	NA	NA	46755385	46751846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46751800_46755400
ES.1804.1	chr1	-	1553	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	-14	7	-11	-7	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGATCTTGGCACTCTT	NA	False	NA	-14	True	ATTAAA	-15	NA	166066327	166028960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
ES.18040.1	chr19	-	2909	1	Antisense	novelGene_ENSMUSG00000064105.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTAGTTGTATGAAGAT	2056	False	NA	NA	False	ATTAAA	-12	NA	46866926	46864017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_46864000_46866900
ES.18041.1	chr19	-	8213	18	NNC	ENSMUSG00000025041.18	novel	3148	18	NA	NA	233	646	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	56.6718838767985	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAGGACTGCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	47003359	46871109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886982_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46939284_46939405_47003136
ES.18041.10	chr19	-	3253	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	3	-108	3	-50	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTGTATCACTTTTA	NA	False	NA	NA	False	AATACA	-17	NA	47003589	46876158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.11	chr19	-	4308	19	NNC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	2	-51	intron_retention	FALSE	canonical	0	0	junction_17	60.3639425116978	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATATCTGTATCACTTTT	7194	False	NA	NA	False	AATACA	-16	NA	46950745	46876159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886961_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46921459_46921529_46939284_46939405_46950710
ES.18041.12	chr19	-	4153	18	NNC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	-18	-51	intron_retention	FALSE	canonical	1	1	junction_11	47.9118278987053	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATATCTGTATCACTTTT	7174	False	NA	NA	False	AATACA	-16	NA	46950765	46876159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886855_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.13	chr19	-	2250	12	ISM	ENSMUSG00000025041.18	ENSMUST00000086961.15	3939	19	71031	997	11132	0	3prime_fragment	FALSE	canonical	3	8	junction_11	41.1092075105901	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGCCCTTGTGTAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	46886882	46876266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766
ES.18041.14	chr19	-	3182	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-35	1	-35	-1	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGCCCTTGTGTAG	NA	False	NA	NA	False	AGTAAA	-16	NA	47003627	46876267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.15	chr19	-	4361	17	NIC	ENSMUSG00000025041.18	novel	3148	18	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	36	junction_16	30.0998338865848	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGCCCTTGTGTAG	NA	False	NA	NA	False	AGTAAA	-16	NA	47003595	46876267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.16	chr19	-	2763	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-35	1000	-35	-1	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGGCCCTTGTGTAG	7157	False	NA	NA	False	AGTAAA	-16	NA	46950782	46876267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.17	chr19	-	2496	19	NNC	ENSMUSG00000025041.18	novel	3148	18	NA	NA	-7	-520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.9576305758518	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCCGTCTGTTGAGGT	NA	False	NA	1	True	AATACA	-20	NA	47003599	46876786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877068_46877206_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.18	chr19	-	2244	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-35	1519	-35	-520	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCCGTCTGTTGAGGT	7157	False	NA	1	True	AATACA	-20	NA	46950782	46876786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.19	chr19	-	2640	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-18	526	-18	-526	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTAGTCAGCCGTCTGT	NA	False	NA	-5	True	AATACA	-14	NA	47003610	46876792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.2	chr19	-	5606	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-18	-2440	-18	1441	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAGGTTTCTTTACAC	NA	False	NA	NA	False	AATAAA	-22	NA	47003610	46873826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.20	chr19	-	1970	19	NNC	ENSMUSG00000025041.18	novel	2788	19	NA	NA	2	354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	46.9430966275943	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTGTATCTGTTCTC	7194	False	NA	-17	True	TTTAAA	-23	NA	46950745	46877092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46921459_46921529_46939284_46939405_46950710
ES.18041.22	chr19	-	1926	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-28	1830	-28	349	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTGTATCTG	7164	False	NA	-22	True	TTTAAA	-18	NA	46950775	46877097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.25	chr19	-	2703	19	NIC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	69	345	combination_of_known_junctions	FALSE	canonical	2	3	junction_12	54.1047224154632	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	7261	False	NA	-26	True	TTTAAA	-14	NA	46950678	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886961_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950026
ES.18041.26	chr19	-	2073	18	NIC	ENSMUSG00000025041.18	novel	7353	18	NA	NA	-77	345	combination_of_known_junctions	FALSE	canonical	1	5	junction_17	36.1371857478087	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	6881	False	NA	-26	True	TTTAAA	-14	NA	46951058	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950842
ES.18041.27	chr19	-	1896	17	NNC	ENSMUSG00000025041.18	novel	2920	17	NA	NA	2717	345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.5860990759882	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	NA	False	NA	-26	True	TTTAAA	-14	NA	46914947	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46914788
ES.18041.28	chr19	-	1996	19	NNC	ENSMUSG00000025041.18	novel	2788	19	NA	NA	0	345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.2716408081141	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	7192	False	NA	-26	True	TTTAAA	-14	NA	46950747	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912246_46912349_46912700_46912775_46939284_46939405_46950710
ES.18041.29	chr19	-	4688	16	NNC	ENSMUSG00000025041.18	novel	3728	18	NA	NA	-29	345	intron_retention	FALSE	canonical	1	1	junction_9	39.3263270596175	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	7163	False	NA	-26	True	TTTAAA	-14	NA	46950776	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46885001_46886014_46886855_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.3	chr19	-	3648	17	NIC	ENSMUSG00000025041.18	novel	3728	18	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	12	junction_15	34.4283676638902	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTAAGTCTGAATAATT	7197	False	NA	NA	False	AGTAAA	-13	NA	46950742	46875268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46939284_46939405_46950710
ES.18041.30	chr19	-	1951	19	FSM	ENSMUSG00000025041.18	ENSMUST00000235596.2	2788	19	2	835	2	345	multi-exon	FALSE	canonical	2	6	junction_16	45.187572037748	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	7194	False	NA	-26	True	TTTAAA	-14	NA	46950745	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46897928_46897988_46912700_46912775_46939284_46939405_46950710
ES.18041.31	chr19	-	2059	19	NNC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	2	345	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	47.3415485828487	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTCAGTTTTGTGTA	7194	False	NA	-26	True	TTTAAA	-14	NA	46950745	46877101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886793_46886961_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.32	chr19	-	2403	19	NNC	ENSMUSG00000025041.18	novel	3148	18	NA	NA	1	344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.0267073461186	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTACTTCAGTTTTGTGT	NA	False	NA	-27	True	TTTAAA	-13	NA	47003591	46877102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880939_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886855_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.34	chr19	-	2175	18	FSM	ENSMUSG00000025041.18	ENSMUST00000236501.2	3183	18	13	995	13	343	multi-exon	FALSE	canonical	3	7	junction_17	35.7064153463466	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTACTTCAGTTTTGTG	7593	False	NA	-28	True	TTTAAA	-12	NA	46950346	46877103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950026
ES.18041.35	chr19	-	2346	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	-35	837	-35	343	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTACTTCAGTTTTGTG	NA	False	NA	-28	True	TTTAAA	-12	NA	47003627	46877103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.36	chr19	-	5026	18	NNC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	2	343	intron_retention	TRUE	non_canonical	0	0	junction_8	56.1780412469063	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTACTTCAGTTTTGTG	7194	False	NA	-28	True	TTTAAA	-12	NA	46950745	46877103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46884412_46884477_46885001_46886014_46886109_46886766_46886855_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.37	chr19	-	2341	18	NIC	ENSMUSG00000025041.18	novel	3939	19	NA	NA	2	-537	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	51.8560691058837	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCGGGGTGTA	NA	False	NA	NA	False	NA	NA	NA	47003590	46877983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46886766_46886961_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ES.18041.38	chr19	-	182	1	Intergenic	novelGene_14978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGTGTGTGGGTGGG	2875	False	NA	NA	False	NA	NA	NA	46966692	46966510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46966500_46966700
ES.18041.39	chr19	-	178	1	Intergenic	novelGene_14979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46989270	46989092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46989100_46989300
ES.18041.4	chr19	-	3735	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-8	1	-8	-1	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTAAGTCTGAATAATT	7184	False	NA	NA	False	AGTAAA	-13	NA	46950755	46875268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.40	chr19	-	3999	1	Intergenic	novelGene_14980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCCTCAAAATAGTATAG	NA	False	NA	NA	False	NA	NA	NA	47002300	46998301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_46998300_47002300
ES.18041.5	chr19	-	4020	17	NIC	ENSMUSG00000025041.18	novel	3728	18	NA	NA	0	181	intron_retention	FALSE	canonical	3	118	junction_5	16.2788205960997	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCTTGTTTTAAAGTA	7192	False	NA	NA	False	NA	NA	NA	46950747	46875927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.6	chr19	-	4093	17	NIC	ENSMUSG00000025041.18	novel	3728	18	NA	NA	2	-3	intron_retention	FALSE	canonical	3	118	junction_4	15.1280988561022	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGGTATAAGGATTT	7194	False	NA	NA	False	AAAACA	-18	NA	46950745	46876111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.7	chr19	-	2919	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	-35	844	-35	-3	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGGTATAAGGATTT	7157	False	NA	NA	False	AAAACA	-18	NA	46950782	46876111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ES.18041.8	chr19	-	1962	10	NNC	ENSMUSG00000025041.18	novel	1404	16	NA	NA	15010	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6380864863805	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATGGGTATAAGGATT	NA	False	NA	NA	False	AAAACA	-17	NA	46883004	46876112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_46877068_46877206_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959
ES.18041.9	chr19	-	3169	18	FSM	ENSMUSG00000025041.18	ENSMUST00000236501.2	3183	18	-35	49	-35	-49	multi-exon	FALSE	canonical	3	7	junction_17	35.7064153463466	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCTGTATCACTTTTAG	7545	False	NA	NA	False	AATACA	-18	NA	46950394	46876157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950026
ES.18042.1	chr19	+	179	1	Intergenic	novelGene_14981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCATTGTTCTGCAC	367	False	NA	NA	False	NA	NA	NA	47017194	47017373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47017200_47017400
ES.18043.1	chr19	+	1796	1	Intergenic	novelGene_14982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAACCAAAAATTCCAG	6524	False	NA	NA	False	NA	NA	NA	47031785	47033581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47031800_47033600
ES.18044.1	chr19	+	1183	1	Antisense	novelGene_ENSMUSG00000025050.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGGACCCAGAGTGCC	NA	False	NA	NA	False	NA	NA	NA	47037503	47038686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_47037500_47038700
ES.18045.1	chr19	-	2192	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	-28	-5	-26	5	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGTTGACATATTCTT	NA	False	NA	-14	True	AATAAA	-22	NA	47039371	47022050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.10	chr19	-	2035	9	NIC	ENSMUSG00000025050.9	novel	2068	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	183.006446266245	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039330	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.13	chr19	-	2154	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	174.534583930103	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039347	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036435_47036542_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.14	chr19	-	2836	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_6	219.813445033019	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039347	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028582_47030560_47031233_47034248_47034358_47036385_47036477_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.15	chr19	-	2162	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	174.62114193269	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039330	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028600_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.16	chr19	-	2190	11	NIC	ENSMUSG00000025050.9	novel	2068	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	203.669830853762	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039358	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47023125_47025676_47025764_47028482_47028582_47030560_47030579_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.17	chr19	-	4096	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	174.62114193269	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGAGGTGTGTTGAC	NA	False	NA	-22	True	AATAAA	-14	NA	47039304	47022058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47030277_47030920_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.19	chr19	-	3512	9	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	14	-1	intron_retention	FALSE	canonical	2	4	junction_6	179.351217935647	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGAGGTGTGTTGAC	NA	False	NA	-22	True	AATAAA	-14	NA	47039315	47022058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036469_47036546_47036603_47037238_47037336_47037428
ES.18045.20	chr19	-	2165	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	173.325640854946	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTTTGAGGTGTGTTGA	NA	False	NA	-23	True	AATAAA	-13	NA	47039330	47022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036469_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.23	chr19	-	1216	10	NNC	ENSMUSG00000025050.9	novel	2832	7	NA	NA	0	1188	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	164.610726740467	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATGTTTTGAGATAG	NA	False	NA	NA	False	NA	NA	NA	47039345	47024053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47024178_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.3	chr19	-	4808	9	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-24	0	intron_retention	FALSE	canonical	3	493	junction_6	49.5654554604313	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039369	47022055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47023125_47025676_47025764_47028482_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.4	chr19	-	3627	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_3	174.62114193269	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039304	47022055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028582_47029697_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.6	chr19	-	4817	9	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_5	184.755201212307	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039347	47022055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47031233_47034248_47034358_47036385_47036477_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.7	chr19	-	4661	8	NIC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_3	195.546643530178	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039331	47022055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47023125_47025676_47025764_47028482_47031233_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.8	chr19	-	2110	10	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	228.512095473692	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039304	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47028551_47031204_47031233_47034248_47034358_47036385_47036469_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18045.9	chr19	-	4808	9	NNC	ENSMUSG00000025050.9	novel	2159	10	NA	NA	-3	0	intron_retention	FALSE	canonical	2	4	junction_5	183.79608265684	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGAGGTGTGTTGACA	NA	False	NA	-21	True	AATAAA	-15	NA	47039348	47022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47023125_47025676_47025764_47028482_47031233_47034248_47034358_47036385_47036469_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ES.18046.1	chr19	-	169	1	Intergenic	novelGene_14983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAGTAAAA	1804	False	NA	NA	False	NA	NA	NA	47049065	47048896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47048900_47049100
ES.18047.1	chr19	+	176	1	Intergenic	novelGene_14984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47053469	47053645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47053500_47053600
ES.18048.1	chr19	+	3285	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-18	-7	-18	7	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATTGAGTATTACATG	NA	False	NA	22	True	AATAAA	-34	NA	47056166	47071925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.10	chr19	+	4889	8	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	160	junction_3	45.2985560881743	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056180	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064572_47065712_47067337_47068979_47069145_47070247_47070761_47070865
ES.18048.11	chr19	+	3358	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	160	junction_3	41.4380394216608	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056181	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.12	chr19	+	6314	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	0	-3054	0	3054	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGTTGGAGCCTGTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	47056184	47074972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.13	chr19	+	3347	10	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1	junction_7	75.5086455682762	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATTTATTGTACAAATT	NA	False	NA	10	True	AATAAA	-22	NA	47056185	47071913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067273_47068979_47069145_47070247_47070761_47070865
ES.18048.14	chr19	+	2644	10	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	4	-451	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.0605550793428	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCTATGAACGTGTG	NA	False	NA	NA	False	AATATA	-20	NA	47056188	47071467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064576_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
ES.18048.15	chr19	+	2478	10	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	5	-453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.2084327040016	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGTTCTATGAACGTG	NA	False	NA	NA	False	AATATA	-18	NA	47056189	47071465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056766_47059419_47059499_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
ES.18048.16	chr19	+	2601	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	5	654	5	-654	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCGTTAGTTGAATAAG	NA	False	NA	NA	False	NA	NA	NA	47056189	47071264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.17	chr19	+	4763	12	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	5	1701	intron_retention	FALSE	non_canonical	0	0	junction_1	68.5887251896439	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATCTAATTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	47056189	47073619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056293_47056485_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.2	chr19	+	2930	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-16	-503	intron_retention	FALSE	canonical	3	160	junction_3	41.2349486195184	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTGCTTCAAGATTCAA	NA	False	NA	NA	False	TTTAAA	-6	NA	47056168	47071415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070761_47070865
ES.18048.20	chr19	+	6072	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	7	-2819	7	2819	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTCTGTGGTTCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	47056191	47074737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.21	chr19	+	3639	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	12	-391	12	391	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGTGTGAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	47056196	47072309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.22	chr19	+	3436	8	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	12	-12	intron_retention	FALSE	non_canonical	0	0	junction_4	101.443660849412	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTTCATAATTTATTGT	NA	False	NA	3	True	AATAAA	-15	NA	47056196	47071906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064496_47065525_47065834_47067206_47067337_47070247_47070761_47070865
ES.18048.23	chr19	+	3181	11	NNC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	71.6589840843421	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTATTGTACAAATTGA	NA	False	NA	12	True	AATAAA	-24	NA	47056196	47071915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067273_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.24	chr19	+	2125	8	ISM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	7988	2	7988	-2	3prime_fragment	FALSE	canonical	3	161	junction_5	21.7415242692646	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47064172	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.25	chr19	+	3200	3	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	11324	-2	intron_retention	FALSE	canonical	3	161	junction_1	30.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47067508	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47069145_47070247_47070761_47070865
ES.18048.3	chr19	+	3109	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	71.9305220334178	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056168	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
ES.18048.4	chr19	+	2839	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-16	437	-16	-437	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTGTGCTGTAATGAG	NA	False	NA	NA	False	AATATA	-34	NA	47056168	47071481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ES.18048.5	chr19	+	840	2	ISM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-14	12254	-14	-12254	5prime_fragment	FALSE	canonical	3	300	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAACGTCTTTATCTA	NA	False	NA	31	True	AATGAA	-28	NA	47056170	47059664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47056766_47059419
ES.18048.6	chr19	+	3429	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	160	junction_3	41.2349486195184	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATTGTACAAATTGAG	NA	False	NA	13	True	AATAAA	-25	NA	47056170	47071916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070761_47070865
ES.18048.7	chr19	+	6074	9	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	160	junction_2	23.1880896151451	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTATTGTACAAATTG	NA	False	NA	11	True	AATAAA	-23	NA	47056177	47071914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070761_47070865
ES.18048.8	chr19	+	1763	7	ISM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	-4	4509	-4	-4509	5prime_fragment	FALSE	canonical	3	160	junction_3	45.2760054186173	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGGAGTTCGGTGTC	NA	False	NA	NA	False	GATAAA	-42	NA	47056180	47067409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206
ES.18049.1	chr19	-	157	1	Intergenic	novelGene_14985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6181	False	NA	NA	False	NA	NA	NA	47062236	47062079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47062100_47062200
ES.1805.1	chr1	+	1059	5	NNC	ENSMUSG00000040612.14	novel	1238	4	NA	NA	-50	-40169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAGAGGTGTGCTAAG	NA	False	NA	NA	False	AATAAA	-20	NA	166081657	166098670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_166081796_166081901_166082036_166096873_166097207_166098067_166098188_166098336
ES.1805.2	chr1	+	8289	10	FSM	ENSMUSG00000040612.14	ENSMUST00000111416.7	8251	10	-37	-1	-37	1	multi-exon	FALSE	canonical	0	0	junction_1	0.314269680527354	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGTTATAAAGAACTCAA	NA	False	NA	14	True	AATAAA	-14	NA	166081670	166144393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_166082036_166096873_166097207_166098067_166098188_166118984_166119042_166122159_166122307_166123320_166123498_166131070_166131185_166135288_166135503_166136415_166137113_166138328
ES.18050.1	chr19	-	465	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-39	-64	-35	60	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACTGGCAGTGACTTG	NA	False	NA	60	True	TATAAA	-23	NA	47079121	47071842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
ES.18050.2	chr19	-	4867	2	ISM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-72	-4	-68	0	intron_retention	FALSE	canonical	3	5910	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	NA	False	NA	0	True	AATAAA	-17	NA	47079154	47071902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47072009_47074393
ES.18050.3	chr19	-	4688	3	ISM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	19	-2	1	2	intron_retention	FALSE	canonical	3	5910	junction_1	191.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTGTCTTTATTTA	NA	False	NA	-2	True	AATAAA	-15	NA	47079063	47071904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47072009_47074393_47074487_47074572
ES.18050.4	chr19	-	483	5	NNC	ENSMUSG00000071528.5	novel	425	5	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2533.27548590752	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTTGTCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	47079117	47071906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47072009_47073211_47073298_47074393_47074487_47074572_47074669_47079011
ES.18050.5	chr19	-	3265	4	NNC	ENSMUSG00000071528.5	novel	362	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2880.52151913889	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTTGTCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	47079051	47071906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47072009_47074393_47074487_47074572_47074669_47076077
ES.18050.6	chr19	-	3950	1	NIC	ENSMUSG00000071528.5	novel	2733	3	NA	NA	3208	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTTGTCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	47075856	47071906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47071900_47075900
ES.18050.7	chr19	-	491	5	NNC	ENSMUSG00000071528.5	novel	425	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3053.75370445948	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGGTTGTCTTTAT	NA	False	NA	-5	True	AATAAA	-12	NA	47079078	47071907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47072009_47074393_47074487_47074572_47074669_47076077_47076212_47079011
ES.18051.1	chr19	+	6074	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-32	719	-32	-105	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079174	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.10	chr19	+	5907	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	854	0	-240	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTGTTTTAAAATCT	NA	False	NA	NA	False	AGTAAA	-12	NA	47079206	47119450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.11	chr19	+	6393	35	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	intron_retention	FALSE	canonical	3	156	junction_7	35.7605938038528	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.12	chr19	+	4073	27	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	6800	0	-3416	5prime_fragment	FALSE	canonical	3	156	junction_7	25.4883950852867	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAATAGAAGATCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	47079206	47113504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483
ES.18051.13	chr19	+	6278	37	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	77.3101567680869	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47080971_47081077_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102162_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108561_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.14	chr19	+	5978	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	51.2033959332976	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108749_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.15	chr19	+	6792	35	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	9	-108	intron_retention	FALSE	canonical	0	0	junction_14	63.107394595207	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079215	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095587_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47103057_47105735_47105842_47107974_47108065_47108231_47108262_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.16	chr19	+	6033	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	11	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.1256635104891	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079217	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082320_47083639_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.17	chr19	+	7009	35	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	11	-105	intron_retention	FALSE	canonical	3	156	junction_7	35.3805925922663	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079217	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.19	chr19	+	6387	35	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	14	-104	intron_retention	FALSE	canonical	3	5	junction_20	51.272231231942	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTGTGTGTAAAATT	NA	False	NA	27	True	NA	NA	NA	47079220	47119586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102162_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.20	chr19	+	7010	35	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	14	-108	intron_retention	FALSE	canonical	3	5	junction_19	51.1348038628287	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079220	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102162_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.21	chr19	+	7049	34	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	15	-108	intron_retention	FALSE	canonical	3	156	junction_7	36.1747366299733	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079221	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.22	chr19	+	5972	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	16	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	60.7573561515856	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079222	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089546_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113492_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.23	chr19	+	6072	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	18	-108	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	50.9622188989259	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079224	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108262_47108561_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.25	chr19	+	6036	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	21	-105	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_24	50.8420202235136	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079227	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108350_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.27	chr19	+	7084	33	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	25	-108	intron_retention	FALSE	canonical	3	156	junction_7	36.1048684173963	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079231	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.28	chr19	+	8515	32	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	32	-108	intron_retention	FALSE	canonical	3	156	junction_7	35.7768549578688	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079238	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47116532_47116713_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.29	chr19	+	6267	35	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	40	-108	intron_retention	FALSE	canonical	1	2	junction_27	51.4864177339293	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079246	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115396_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.3	chr19	+	5946	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-12	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	51.0048096971736	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079194	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093137_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.30	chr19	+	6097	37	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	47	-108	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	61.0266082424728	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079253	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47080971_47081077_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.31	chr19	+	6124	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	53	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.5579103489601	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079259	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085523_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107903_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.33	chr19	+	5359	31	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	7352	722	7352	-108	3prime_fragment	FALSE	canonical	3	156	junction_2	35.0587601986532	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47086558	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.34	chr19	+	4357	25	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	14006	-108	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	72.0748911241325	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	382	False	NA	23	True	NA	NA	NA	47093212	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102162_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115396_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.35	chr19	+	4016	22	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	16782	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.8558737600811	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	3158	False	NA	23	True	NA	NA	NA	47095988	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116963_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.37	chr19	+	2993	17	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-12939	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.768414721658	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	8819	False	NA	26	True	NA	NA	NA	47101649	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108784_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.38	chr19	+	3913	16	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-12685	5	intron_retention	FALSE	canonical	3	227	junction_9	21.8942914934464	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCTTTAAGTTTTCTA	9073	False	NA	NA	False	ATTAAA	-25	NA	47101903	47120309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.39	chr19	+	6800	13	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-8775	-108	intron_retention	FALSE	canonical	3	227	junction_6	21.5574168726734	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47105813	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47105842_47107974_47108065_47108231_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.4	chr19	+	6778	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	-12	-5	-12	5	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCTTTAAGTTTTCTA	NA	False	NA	NA	False	ATTAAA	-25	NA	47079194	47120309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.40	chr19	+	8137	1	FSM	ENSMUSG00000025047.10	ENSMUST00000236656.2	2594	1	-5651	108	-3143	-108	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47111445	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47111400_47119600
ES.18051.41	chr19	+	2835	10	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-2329	-109	intron_retention	FALSE	canonical	3	227	junction_4	23.3449706429669	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTGTGTGTGTGTA	NA	False	NA	22	True	NA	NA	NA	47112259	47119581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.42	chr19	+	3891	9	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-1149	0	intron_retention	FALSE	canonical	3	227	junction_2	23.8733638182808	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTCTCTTTAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	47113439	47120304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.43	chr19	+	3323	4	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	663	-108	intron_retention	FALSE	canonical	3	281	junction_2	9.41629792788369	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47115251	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.5	chr19	+	6009	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-12	-105	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	48.9221789359053	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079194	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089546_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.6	chr19	+	6031	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-2	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	51.0863694429066	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATGTGTGTGTGTGT	NA	False	NA	19	True	NA	NA	NA	47079204	47119578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105741_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.7	chr19	+	6038	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	-2	-105	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	49.5686207520978	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079204	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081226_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.8	chr19	+	7009	34	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-108	intron_retention	FALSE	canonical	3	156	junction_7	35.9581942752579	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTGTGTAA	NA	False	NA	23	True	NA	NA	NA	47079206	47119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47117750_47118067_47118222_47118386_47118553_47119077
ES.18051.9	chr19	+	6015	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	50.5853572424564	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115780_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ES.18052.1	chr19	+	4215	1	Antisense	novelGene_ENSMUSG00000033033.11_AS_novelGene_ENSMUSG00000079258.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTTGCATATAGCACT	NA	False	NA	NA	False	NA	NA	NA	47126301	47130516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_47126300_47130500
ES.18053.1	chr19	-	1679	2	Antisense	novelGene_ENSMUSG00000025047.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	8230	False	NA	NA	False	NA	NA	NA	47082641	47080112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_47081340_47082189
ES.18054.1	chr19	-	1849	4	NNC	ENSMUSG00000033033.11	novel	2458	3	NA	NA	-151	466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.32049379893857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGTTTGCTGTTGT	5178	False	NA	NA	False	NA	NA	NA	47126884	47119795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47120020_47121245_47121613_47123787_47124505_47126343
ES.18054.2	chr19	-	2190	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	-148	416	-148	-416	multi-exon	FALSE	canonical	2	8	junction_2	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTAGACAGGGTATT	5181	False	NA	-8	True	GATAAA	-15	NA	47126881	47120677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47121613_47123787_47124505_47126343
ES.18055.1	chr19	+	4310	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	-155	3	-155	-3	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCTGTGCTGTGCGTC	NA	False	NA	37	True	AATAAA	-19	NA	47167103	47247877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.10	chr19	+	3779	7	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	142	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.4722126896961	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGAGGGCTGTGCTGT	NA	False	NA	32	True	AATAAA	-14	NA	47167731	47247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47167991_47210714_47210817_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.11	chr19	+	3467	6	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	1840	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.2741197079153	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGAGGGCTGTGCTG	NA	False	NA	31	True	AATAAA	-13	NA	47219189	47247871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47219240_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.12	chr19	+	3541	3	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	1869	16	intron_retention	FALSE	canonical	0	0	junction_1	25	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGGATGTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	47219218	47232066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47219240_47228240_47228483_47228788
ES.18055.13	chr19	+	1605	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11370	1642	11370	-1642	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCCCTGGAGGATTGGG	NA	False	NA	NA	False	ATTAAA	-12	NA	47228719	47246232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.14	chr19	+	3248	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11372	-3	11372	-3	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCTGTGCTGTGCGTC	NA	False	NA	37	True	AATAAA	-19	NA	47228721	47247877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.15	chr19	+	3043	5	NNC	ENSMUSG00000006435.17	novel	3606	6	NA	NA	11418	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.3823633931171	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228767	47247874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47228881_47229036_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.16	chr19	+	9836	4	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	17194	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.4856703531591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGGCTGTGCTGTGCGT	5474	False	NA	36	True	AATAAA	-18	NA	47234543	47247876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47238134_47238169_47242248_47245150_47245298_47245855
ES.18055.17	chr19	+	7119	4	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	19907	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.4856703531591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	8187	False	NA	34	True	AATAAA	-16	NA	47237256	47247874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47238132_47238169_47242248_47245150_47245298_47245855
ES.18055.18	chr19	+	2959	3	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	22474	1631	22474	-1631	3prime_fragment	FALSE	canonical	3	77	junction_1	18.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGGGCTGAAAGAGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	47239823	47246243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47242248_47245150_47245298_47245855
ES.18055.19	chr19	+	6799	2	NIC	ENSMUSG00000006435.17	novel	3606	6	NA	NA	23168	0	intron_retention	FALSE	canonical	3	114	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	181	False	NA	34	True	AATAAA	-16	NA	47240517	47247874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47245298_47245855
ES.18055.2	chr19	+	2292	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-121	1863	81	352	multi-exon	FALSE	canonical	3	49	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCCGAAGCCCGTGTG	NA	False	NA	NA	False	AGTAAA	-16	NA	47167339	47230187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788
ES.18055.3	chr19	+	1755	4	FSM	ENSMUSG00000006435.17	ENSMUST00000235290.2	1060	4	-228	-467	-99	467	multi-exon	FALSE	canonical	3	8	junction_3	19.5675468285856	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTGAGAGCCCAAACG	NA	False	NA	NA	False	NA	NA	NA	47167361	47230302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47229740
ES.18055.4	chr19	+	4446	2	ISM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-90	-16	-90	16	intron_retention	FALSE	canonical	3	49	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGGATGTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	47167370	47232066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47167991_47228240
ES.18055.5	chr19	+	1889	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-70	2215	-70	0	multi-exon	FALSE	canonical	3	49	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTGTTTTTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	47167390	47229835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788
ES.18055.6	chr19	+	4120	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	-70	-16	-70	16	multi-exon	FALSE	canonical	3	49	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGGATGTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	47167390	47232066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788
ES.18055.7	chr19	+	4095	7	NNC	ENSMUSG00000006435.17	novel	4158	6	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	39.6722685120084	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGAGGGCTGTGCTGTG	NA	False	NA	33	True	AATAAA	-15	NA	47167410	47247873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47167991_47207395_47207492_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.8	chr19	+	2331	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	179	1648	-23	-1642	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCCCTGGAGGATTGGG	NA	False	NA	NA	False	ATTAAA	-12	NA	47167437	47246232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ES.18055.9	chr19	+	2279	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	2	1753	2	462	multi-exon	FALSE	canonical	3	49	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGACATATTGAGAGCCC	NA	False	NA	NA	False	NA	NA	NA	47167462	47230297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47167991_47228240_47228483_47228788
ES.18056.1	chr19	-	220	1	Intergenic	novelGene_14986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGCCTATATGGAAAT	NA	False	NA	NA	False	NA	NA	NA	47174074	47173854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47173900_47174100
ES.18057.1	chr19	-	187	1	Intergenic	novelGene_14987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTACTGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	47222503	47222316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47222300_47222500
ES.18058.1	chr19	-	4365	1	ISM	ENSMUSG00000053617.13	ENSMUST00000081619.10	10454	15	199861	2	50211	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGCACGCGATTCTC	NA	False	NA	0	True	AATAAA	-21	NA	47252979	47248614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47248600_47253000
ES.18059.1	chr19	+	7342	1	Intergenic	novelGene_14988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	47342599	47349941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47342600_47349900
ES.1806.1	chr1	+	5129	6	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	-57	-5	intron_retention	FALSE	canonical	3	163	junction_1	12.5123938556936	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCTTTTCCTGTTTA	NA	False	NA	10	True	AATAAA	-10	NA	166206608	166221185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166217557_166219391_166219555_166220136
ES.1806.2	chr1	+	2285	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	-52	-18	-52	18	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGCAGATAAGGAATA	NA	False	NA	33	True	AATAAA	-33	NA	166206613	166221208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ES.1806.3	chr1	+	4050	7	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	-40	-3	intron_retention	FALSE	canonical	3	163	junction_1	11.4418821295566	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTTCCTGTTTATT	NA	False	NA	12	True	AATAAA	-12	NA	166206625	166221187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166216341_166217404_166217557_166219391_166219555_166220136
ES.1806.5	chr1	+	2340	9	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	77.1434337776068	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTTCCTGTTTATT	NA	False	NA	12	True	AATAAA	-12	NA	166206629	166221187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166207046_166208350_166208443_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ES.1806.6	chr1	+	3306	7	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	-27	0	intron_retention	FALSE	canonical	3	160	junction_4	13.208793367383	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	15	True	AATAAA	-15	NA	166206638	166221190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166217557_166219391_166219555_166220136
ES.1806.7	chr1	+	4862	7	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	160	junction_3	12.11060141639	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	15	True	AATAAA	-15	NA	166206668	166221190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ES.1806.8	chr1	+	4868	7	NIC	ENSMUSG00000026563.14	novel	2215	8	NA	NA	59	0	intron_retention	FALSE	canonical	0	0	junction_1	85.8203873732162	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	15	True	AATAAA	-15	NA	166206966	166221190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_166207046_166208350_166208443_166209695_166209788_166209965_166210032_166214234_166217557_166219391_166219555_166220136
ES.18060.1	chr19	+	674	2	Antisense	novelGene_ENSMUSG00000053617.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTACTGGACCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	47429617	47431135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_47429696_47430539
ES.18061.1	chr19	-	5508	13	NIC	ENSMUSG00000053617.13	novel	3437	14	NA	NA	5	1927	combination_of_known_splicesites	TRUE	canonical	1	2	junction_3	1.49768339630095	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAGGTGAGAGGACCT	7927	False	NA	NA	False	AATAAA	-16	NA	47452835	47253424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47257376_47258276_47258397_47260446_47260497_47261622_47261958_47266751_47266870_47275043_47275158_47302473_47302606_47331878_47331908_47353061_47353154_47361822_47361900_47386254_47386331_47412928_47413010_47452502
ES.18061.2	chr19	-	5350	13	NIC	ENSMUSG00000053617.13	novel	10454	15	NA	NA	-39	1761	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.14087209644419	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTCATTAATGCACTT	7883	False	NA	-11	True	GATAAA	-14	NA	47452879	47253590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47257376_47260446_47260497_47261622_47261958_47266751_47266870_47271459_47271544_47275043_47275158_47302473_47302606_47331878_47331908_47353061_47353154_47361822_47361900_47386254_47386331_47412928_47413010_47452502
ES.18061.3	chr19	-	3587	6	ISM	ENSMUSG00000053617.13	ENSMUST00000111800.4	3437	14	177022	-359	27526	319	3prime_fragment	FALSE	canonical	1	2	junction_3	1.32664991614216	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCATTGCCCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	47275664	47255032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47257376_47258276_47258397_47260446_47260497_47261622_47261958_47266751_47266870_47275043
ES.18061.4	chr19	-	3253	3	ISM	ENSMUSG00000053617.13	ENSMUST00000111800.4	3437	14	-141	128092	13	-31436	5prime_fragment	FALSE	canonical	1	2	junction_2	2	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCAAAAAGACTCAAATTA	7935	False	NA	NA	False	NA	NA	NA	47452827	47383483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47386331_47412928_47413010_47452502
ES.18061.5	chr19	-	5638	1	NIC	ENSMUSG00000053617.13	novel	10454	15	NA	NA	9650	-31463	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47389148	47383510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47383500_47389100
ES.18062.1	chr19	-	186	1	Intergenic	novelGene_14989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	47478980	47478794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47478800_47479000
ES.18063.1	chr19	+	123	1	Intergenic	novelGene_14990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	47523758	47523881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47523800_47523900
ES.18064.1	chr19	-	6223	13	NNC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-1	6993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.0293867124427	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	TTTAAA	-33	NA	47525559	47482478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47484356_47487025_47487835_47487883_47488540_47488583_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.10	chr19	-	3584	10	NNC	ENSMUSG00000042694.18	novel	1618	10	NA	NA	12	1866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6035412658979	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGACTTAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-7	NA	47525521	47493777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47496092_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.11	chr19	-	5900	9	NNC	ENSMUSG00000042694.18	novel	1618	10	NA	NA	-3	1866	intron_retention	FALSE	canonical	0	0	junction_1	45.1454247404983	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGACTTAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-7	NA	47525536	47493777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47496318_47496625_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.12	chr19	-	1424	10	FSM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	25	169	13	-169	multi-exon	FALSE	canonical	1	1	junction_1	42.2937989792684	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCAGTCATCTCAAGAA	NA	False	NA	NA	False	NA	NA	NA	47525450	47495812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47496038_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.13	chr19	-	3217	2	NNC	ENSMUSG00000042694.18	novel	523	5	NA	NA	12097	1307	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTTACATTGACTATA	NA	False	NA	NA	False	AATAAA	-20	NA	47512604	47509263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47511358_47511481
ES.18064.14	chr19	-	1993	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	-136	-1299	-6	1299	multi-exon	TRUE	canonical	1	2	junction_1	57.4429064376099	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGTGGATGTTACAT	NA	False	NA	NA	False	AATAAA	-12	NA	47525539	47509271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.15	chr19	-	4441	4	FSM	ENSMUSG00000042694.18	ENSMUST00000183004.2	1107	4	35	-3369	-13	1299	multi-exon	FALSE	canonical	3	128	junction_2	4.64279609239471	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGTGGATGTTACAT	NA	False	NA	NA	False	AATAAA	-12	NA	47525498	47509271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.16	chr19	-	1966	6	NNC	ENSMUSG00000042694.18	novel	558	5	NA	NA	-4	1299	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	65.6639931773876	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGTGGATGTTACAT	NA	False	NA	NA	False	AATAAA	-12	NA	47525467	47509271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47510637_47512012_47512058_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.17	chr19	-	2635	6	NNC	ENSMUSG00000042694.18	novel	558	5	NA	NA	-2	1298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6639931773876	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTGTGGATGTTACA	NA	False	NA	NA	False	AATAAA	-11	NA	47525477	47509272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47511297_47512012_47512058_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.18	chr19	-	1754	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	-118	-1078	12	1078	multi-exon	FALSE	canonical	1	2	junction_1	57.4429064376099	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGCCTAGAAAGAGCC	NA	False	NA	NA	False	AATAAA	-15	NA	47525521	47509492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.19	chr19	-	2098	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-40	-1368	8	1368	multi-exon	FALSE	canonical	3	136	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGCTATCAAATATTCC	NA	False	NA	NA	False	NA	NA	NA	47525525	47522985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47524811_47525252
ES.18064.2	chr19	-	2695	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	65	-768	-8	768	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATACCACACAATGA	NA	False	NA	NA	False	NA	NA	NA	47525493	47488703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.20	chr19	-	2599	1	NIC	ENSMUSG00000042694.18	novel	748	5	NA	NA	-26	1368	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGCTATCAAATATTCC	NA	False	NA	NA	False	NA	NA	NA	47525584	47522985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47523000_47525600
ES.18064.21	chr19	-	746	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	-11	-45	-11	45	multi-exon	FALSE	canonical	3	136	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACATGTGCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	47525496	47524308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47524811_47525252
ES.18064.3	chr19	-	2021	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	-26	-3	-26	3	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCCTTATGACTTGAA	NA	False	NA	-7	True	AATAAA	-30	NA	47525584	47489468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.4	chr19	-	1796	10	NNC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	40.2090217749545	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAATTCATTTCCTTAT	NA	False	NA	-15	True	AATAAA	-22	NA	47525476	47489476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525361
ES.18064.5	chr19	-	2006	10	NNC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.595346368388	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAATTCATTTCCTTAT	NA	False	NA	-15	True	AATAAA	-22	NA	47525568	47489476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505456_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18064.6	chr19	-	4585	7	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-102	-9	intron_retention	FALSE	canonical	3	124	junction_2	5.36708072936821	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGGCATTTCAATTCA	NA	False	NA	-24	True	AATAAA	-13	NA	47524803	47489485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47505634_47513125_47513195_47517075_47517172_47524634
ES.18064.7	chr19	-	1796	10	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	-5	-10	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	41.1369288301916	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTGGCATTTCAATTC	NA	False	NA	-25	True	AATAAA	-12	NA	47525538	47489486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525413
ES.18064.8	chr19	-	1833	9	NIC	ENSMUSG00000042694.18	novel	1992	10	NA	NA	21	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	44.6178215514832	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGCTTGGCATTTCAAT	NA	False	NA	-27	True	AATAAA	-10	NA	47525512	47489488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47524634_47524811_47525252
ES.18064.9	chr19	-	1533	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	8	451	8	-446	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGCTCTGATAAGTCAC	NA	False	NA	NA	False	AGTAAA	-17	NA	47525550	47489922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ES.18065.1	chr19	-	158	1	Intergenic	novelGene_14991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATGAATAAAAA	7095	False	NA	NA	False	NA	NA	NA	47538741	47538583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47538600_47538700
ES.18066.1	chr19	+	158	1	Intergenic	novelGene_14992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47565245	47565403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_47565200_47565400
ES.18067.1	chr19	+	7434	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-155	-1	-155	1	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGAATTTTCTTTTTA	NA	False	NA	22	True	AATAAA	-18	NA	47567961	47633686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.11	chr19	+	7299	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	85.3043952194141	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568046	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47568783_47597343_47597509_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.12	chr19	+	4761	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCTCAATGATGCTAAA	NA	False	NA	5	True	AATAAA	-14	NA	47568048	47630892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.16	chr19	+	7304	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-55	-1	intron_retention	FALSE	canonical	1	1	junction_9	83.5913606237765	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47568061	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47608972_47609203_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.18	chr19	+	7334	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	83.7998108858145	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47568061	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610801_47611001_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.19	chr19	+	4740	20	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	120.685897571241	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTCAATGATGCTAA	NA	False	NA	4	True	AATAAA	-13	NA	47568063	47630891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47616086_47616180_47618661_47618772_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.2	chr19	+	5969	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-128	1437	-128	1354	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTGTATTTAATGACTT	NA	False	NA	4	True	GATAAA	-17	NA	47567988	47632248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.20	chr19	+	7459	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	83.5981490167763	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568070	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47599878_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.22	chr19	+	3816	7	ISM	ENSMUSG00000025060.16	ENSMUST00000051691.8	4239	19	-387	23462	-46	-6361	5prime_fragment	FALSE	canonical	3	282	junction_1	28.5306852353742	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCAGGCAATTTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	47568070	47607432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960
ES.18067.26	chr19	+	7669	20	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.554420993395	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47568076	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47592405_47592550_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.28	chr19	+	7646	17	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-34	-5	intron_retention	FALSE	canonical	2	2	junction_2	85.6912836509642	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATTTTGGGGAATTTTC	NA	False	NA	16	True	AATAAA	-12	NA	47568082	47633680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47599878_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.3	chr19	+	7587	19	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568015	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.30	chr19	+	7179	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.2133556709172	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568083	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600472_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.31	chr19	+	7234	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.8538482243554	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47568089	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568470_47568538_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.32	chr19	+	6946	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	81.8538482243554	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47568091	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385_47632718_47633072
ES.18067.34	chr19	+	4482	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-21	2817	-21	-26	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAATAAATATTGTTTT	NA	False	NA	-19	True	AATATA	-17	NA	47568095	47630868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.36	chr19	+	6057	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-11	1351	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTAGTGTATTTAATGA	NA	False	NA	1	True	GATAAA	-14	NA	47568105	47632245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.39	chr19	+	7047	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	81.6509433087572	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47568113	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47608972_47609203_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.4	chr19	+	4675	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-99	2702	-99	89	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGAGTTAGAGAATACG	NA	False	NA	96	True	TTTAAA	-3	NA	47568017	47630983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.40	chr19	+	5869	19	NNC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-3	1171	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGTAAATTCATACACT	NA	False	NA	NA	False	NA	NA	NA	47568113	47632065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.41	chr19	+	4479	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.579441407769	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTCAATGATGCTAA	NA	False	NA	4	True	AATAAA	-13	NA	47568113	47630891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597349_47597509_47600013_47600063_47600340_47600491_47603636_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.43	chr19	+	7064	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	40	-1	intron_retention	FALSE	canonical	0	0	junction_9	83.7998108858145	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47568156	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47608972_47609348_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.44	chr19	+	7031	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-97	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.7998108858145	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568360	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610810_47611016_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.45	chr19	+	3498	16	ISM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	267	7578	-74	1214	5prime_fragment	FALSE	canonical	3	226	junction_7	39.9279350830969	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGAGAATGGCTCA	NA	False	NA	NA	False	AAGAAA	-9	NA	47568383	47626107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080
ES.18067.46	chr19	+	5495	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	148	1293	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCAGGATGATGATG	NA	False	NA	-57	True	TATAAA	-2	NA	47568605	47632187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.48	chr19	+	6704	18	NNC	ENSMUSG00000025060.16	novel	792	3	NA	NA	349	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1192924561411	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47568806	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568900_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.49	chr19	+	6615	17	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-11767	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.2916566071135	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47597341	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610804_47611005_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.5	chr19	+	4789	17	NIC	ENSMUSG00000025060.16	novel	4239	19	NA	NA	-98	0	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAATGATGCTAAATT	NA	False	NA	7	True	AATAAA	-16	NA	47568018	47630894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.50	chr19	+	6590	17	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-11764	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.600125456133	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47597344	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609380_47610674_47610806_47611016_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.51	chr19	+	3931	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-11701	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.454514102615	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCTCAATGATGCTAAA	NA	False	NA	5	True	AATAAA	-14	NA	47597407	47630892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47597509_47599223_47599400_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.52	chr19	+	6049	13	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-5167	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	97.6937888961672	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47603941	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47604040_47604960_47605043_47607629_47607789_47608099_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.53	chr19	+	257	1	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-4132	-8560	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTATGTTCTTTTTTA	NA	False	NA	NA	False	TATAAA	-13	NA	47604976	47605233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47605000_47605200
ES.18067.54	chr19	+	4464	10	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	229	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	109.995061617542	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGGAATTTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	47609337	47633683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625831_47626080_47626207_47627314_47627429_47630385
ES.18067.55	chr19	+	4418	9	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-415	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	113.090671587006	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47610681	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626073_47626207_47627314_47627429_47630385
ES.18067.56	chr19	+	2727	7	ISM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	45626	1438	-2344	1353	3prime_fragment	FALSE	canonical	3	287	junction_4	26.0170884014505	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGTGTATTTAATGACT	NA	False	NA	3	True	GATAAA	-16	NA	47613742	47632247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.57	chr19	+	4164	7	ISM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	45626	1	-2344	-1	3prime_fragment	FALSE	canonical	3	287	junction_4	26.0170884014505	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGAATTTTCTTTT	NA	False	NA	20	True	AATAAA	-16	NA	47613742	47633684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.6	chr19	+	7787	18	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-97	0	intron_retention	FALSE	canonical	2	10	junction_1	105.287282065337	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568019	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.7	chr19	+	5768	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	-97	1607	-97	1184	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACTTATCACATGAATG	NA	False	NA	NA	False	NA	NA	NA	47568019	47632078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18067.8	chr19	+	7563	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-81	0	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568035	47633685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ES.18068.1	chr19	-	199	1	Intergenic	novelGene_14993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47595271	47595072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47595100_47595300
ES.18069.1	chr19	-	2440	1	Genic_Genomic	ENSMUSG00000086121.2	novel	NA	NA	NA	NA	-954	-9477	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTTTAAATTAGCTCAC	NA	False	NA	NA	False	NA	NA	NA	47606499	47604059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_47604100_47606500
ES.1807.1	chr1	-	6027	5	NIC	ENSMUSG00000040596.16	novel	4848	6	NA	NA	-9	532	intron_retention	FALSE	canonical	0	0	junction_1	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTCTGGTGATTTTATT	1337	False	NA	NA	False	AATAAA	-19	NA	166237406	166222433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_166227735_166231066_166231194_166235967_166236102_166236566_166236901_166237275
ES.1807.2	chr1	-	6122	6	FSM	ENSMUSG00000040596.16	ENSMUST00000128861.3	4848	6	26	-1300	-9	528	multi-exon	FALSE	canonical	0	0	junction_2	0.8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAGGCTCTGGTGATTT	1337	False	NA	NA	False	AATAAA	-15	NA	166237406	166222437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_166227735_166229434_166229534_166231066_166231194_166235967_166236102_166236566_166236901_166237275
ES.18070.1	chr19	-	4120	36	NIC	ENSMUSG00000025064.16	novel	5588	54	NA	NA	1491	-747	intron_retention	TRUE	canonical	0	0	junction_14	1.38091953983938	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGACACACAATCTGAA	NA	False	NA	NA	False	AATATA	-15	NA	47657996	47635529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47635718_47636038_47636120_47636232_47636296_47636537_47636667_47637169_47637530_47637764_47637912_47638486_47638598_47638695_47638786_47639164_47639306_47639649_47639716_47640191_47640330_47640562_47640686_47641028_47641080_47641787_47641848_47642219_47642274_47642451_47642494_47642607_47642662_47643629_47643708_47644621_47644658_47645523_47645605_47645901_47645938_47647663_47647700_47648429_47648457_47649221_47649294_47649535_47649572_47650774_47650838_47651459_47651496_47651970_47652007_47652241_47652296_47652825_47652862_47653401_47653465_47654295_47654401_47654919_47654983_47655084_47655112_47656132_47657150_47657676
ES.18071.1	chr19	+	1623	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	False	NA	68	True	ACTAAA	-21	NA	47720105	47724027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721192_47721240_47721428_47721957_47722351_47723262
ES.18071.10	chr19	+	1481	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	915.276734108324	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTGTTTTCATTTTCC	NA	False	NA	16	True	ATTAAA	-22	NA	47720187	47723975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721076_47721192_47721240_47721428_47721957_47722351_47723262
ES.18071.11	chr19	+	1477	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-63	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720187	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721227_47721276_47721428_47721957_47722351_47723262
ES.18071.12	chr19	+	1443	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-50	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTCATTTTCCTC	NA	False	NA	18	True	ATTAAA	-24	NA	47720187	47723977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721192_47721288_47721428_47721957_47722351_47723262
ES.18071.14	chr19	+	1426	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	68	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	915.276734108324	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCCAATTTGTTTTCA	NA	False	NA	10	True	ATTAAA	-16	NA	47720188	47723969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721076_47721144_47721240_47721428_47721957_47722351_47723262
ES.18071.15	chr19	+	1436	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	70	-54	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	14	True	ATTAAA	-20	NA	47720190	47723973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721144_47721192_47721208_47721255_47721428_47721957_47722351_47723262
ES.18071.16	chr19	+	1465	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	70	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGTTTTCATT	NA	False	NA	12	True	ATTAAA	-18	NA	47720190	47723971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721227_47721292_47721428_47721957_47722351_47723262
ES.18071.17	chr19	+	1462	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	71	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGTTTTCTCCAATTT	NA	False	NA	3	True	ATTAAA	-9	NA	47720191	47723962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721313_47721371_47721428_47721957_47722351_47723262
ES.18071.18	chr19	+	1473	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	73	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	13	True	ATTAAA	-19	NA	47720193	47723972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721276_47721331_47721428_47721957_47722351_47723262
ES.18071.19	chr19	+	1426	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	75	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	14	True	ATTAAA	-20	NA	47720195	47723973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721150_47721251_47721428_47721957_47722351_47723262
ES.18071.2	chr19	+	1523	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	46	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTATTTCCTACATGAA	NA	False	NA	77	True	ACTAAA	-30	NA	47720166	47724036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721144_47721240_47721428_47721957_47722351_47723262
ES.18071.20	chr19	+	1469	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	76	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	13	True	ATTAAA	-19	NA	47720196	47723972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721227_47721283_47721428_47721957_47722351_47723262
ES.18071.22	chr19	+	1428	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	77	-56	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGTTTTCATT	NA	False	NA	12	True	ATTAAA	-18	NA	47720197	47723971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721192_47721240_47721333_47721379_47721428_47721957_47722351_47723262
ES.18071.23	chr19	+	1471	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	77	-62	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTCTCCAATTTGTT	NA	False	NA	6	True	ATTAAA	-12	NA	47720197	47723965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721342_47721388_47721428_47721957_47722351_47723262
ES.18071.24	chr19	+	1427	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	77	-60	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCCAATTTGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	47720197	47723967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721159_47721251_47721428_47721957_47722351_47723262
ES.18071.25	chr19	+	1468	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	77	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAATTTGTTTTCATTTT	NA	False	NA	14	True	ATTAAA	-20	NA	47720197	47723973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721183_47721240_47721428_47721957_47722351_47723262
ES.18071.27	chr19	+	1409	4	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	78	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	852.180080082191	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCCAATTTGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	47720198	47723967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721318_47721957_47722351_47723262
ES.18071.28	chr19	+	1470	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	78	-60	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCCAATTTGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	47720198	47723967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721336_47721384_47721428_47721957_47722351_47723262
ES.18071.29	chr19	+	1440	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	78	-62	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	926.630589825309	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTCTCCAATTTGTT	NA	False	NA	6	True	ATTAAA	-12	NA	47720198	47723965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721063_47721211_47721292_47721428_47721957_47722351_47723262
ES.18071.3	chr19	+	1454	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	49	-57	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAATTTGTTTTCAT	NA	False	NA	11	True	ATTAAA	-17	NA	47720169	47723970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721144_47721192_47721198_47721245_47721428_47721957_47722351_47723262
ES.18071.30	chr19	+	1470	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	78	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAATTTGTTTTCATTT	NA	False	NA	13	True	ATTAAA	-19	NA	47720198	47723972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721323_47721376_47721428_47721957_47722351_47723262
ES.18071.31	chr19	+	1453	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	79	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720199	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721323_47721384_47721428_47721957_47722351_47723262
ES.18071.33	chr19	+	1458	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	79	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGTTTTCATT	NA	False	NA	12	True	ATTAAA	-18	NA	47720199	47723971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721239_47721302_47721428_47721957_47722351_47723262
ES.18071.35	chr19	+	1410	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	87	-63	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720207	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721144_47721192_47721246_47721293_47721428_47721957_47722351_47723262
ES.18071.38	chr19	+	1447	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	100	-60	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCCAATTTGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	47720220	47723967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721138_47721187_47721428_47721957_47722351_47723262
ES.18071.39	chr19	+	1401	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	101	-58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCCAATTTGTTTTCA	NA	False	NA	10	True	ATTAAA	-16	NA	47720221	47723969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721192_47721240_47721246_47721293_47721428_47721957_47722351_47723262
ES.18071.4	chr19	+	1494	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	53	-63	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720173	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721198_47721244_47721428_47721957_47722351_47723262
ES.18071.40	chr19	+	1187	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	102	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	786.61442270022	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGTTTGGATAGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	47720222	47723756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721144_47721240_47721428_47721957_47722351_47723262
ES.18071.41	chr19	+	1463	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	194	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	926.630589825309	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720314	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720373_47721068_47721192_47721240_47721428_47721957_47722351_47723262
ES.18071.42	chr19	+	1836	4	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	-47	-57	intron_retention	FALSE	canonical	0	0	junction_1	873.697252421506	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAATTTGTTTTCAT	NA	False	NA	11	True	ATTAAA	-17	NA	47720595	47723970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47721144_47721240_47721428_47721957_47722351_47723262
ES.18071.5	chr19	+	1426	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	54	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTCTCCAATTTGT	NA	False	NA	5	True	ATTAAA	-11	NA	47720174	47723964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721127_47721240_47721428_47721957_47722351_47723262
ES.18071.6	chr19	+	1446	6	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	58	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	889.229014371439	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGTTTTCATT	NA	False	NA	12	True	ATTAAA	-18	NA	47720178	47723971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721117_47721164_47721192_47721240_47721428_47721957_47722351_47723262
ES.18071.7	chr19	+	1491	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	59	-56	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCAATTTGTTTTCATT	NA	False	NA	12	True	ATTAAA	-18	NA	47720179	47723971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721329_47721379_47721428_47721957_47722351_47723262
ES.18071.8	chr19	+	1479	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	65	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCTCCAATTTGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	47720185	47723967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721236_47721288_47721428_47721957_47722351_47723262
ES.18071.9	chr19	+	1345	5	NNC	ENSMUSG00000025066.11	novel	1657	4	NA	NA	67	-53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	786.61442270022	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATTTGTTTTCATTTTC	NA	False	NA	15	True	ATTAAA	-21	NA	47720187	47723974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47720261_47721068_47721188_47721379_47721428_47721957_47722351_47723262
ES.18072.1	chr19	-	2854	18	NIC	ENSMUSG00000044948.18	novel	5968	38	NA	NA	-9865	50	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.69044403326073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCGCTTGTATTTATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	47761892	47725994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47726327_47726467_47726622_47727216_47727298_47728108_47728274_47735067_47735181_47736280_47736495_47739506_47739596_47740265_47740353_47741403_47741512_47744440_47744561_47749297_47749424_47750075_47750157_47750380_47750474_47752079_47752287_47754238_47754470_47758818_47758936_47759994_47760100_47761461
ES.18072.2	chr19	-	1409	10	NNC	ENSMUSG00000044948.18	novel	1940	15	NA	NA	7806	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.43331940961333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTCGCTTGTATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	47744213	47725998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47726327_47726467_47726622_47727216_47727298_47728108_47728274_47733882_47734043_47735067_47735181_47739506_47739596_47740265_47740353_47741403_47741512_47744089
ES.18072.3	chr19	-	4219	31	ISM	ENSMUSG00000044948.18	ENSMUST00000160247.3	5968	38	25162	704	-74	45	3prime_fragment	FALSE	canonical	0	0	junction_4	2.94108823397055	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGTCGCTTGTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	47800659	47725999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47726327_47726467_47726622_47727216_47727298_47728108_47728274_47733882_47734043_47735067_47735181_47736280_47736495_47739506_47739596_47740265_47740353_47741403_47741512_47744440_47744561_47749297_47749424_47750075_47750157_47750380_47750474_47752079_47752287_47754238_47754470_47758818_47758936_47759994_47760100_47761461_47761588_47764458_47764537_47766832_47766917_47768699_47768851_47770717_47770849_47773718_47773869_47775359_47775536_47776750_47776892_47779857_47779962_47784041_47784191_47785547_47785629_47790301_47790419_47800506
ES.18072.4	chr19	-	3633	27	NNC	ENSMUSG00000044948.18	novel	5968	38	NA	NA	21786	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.14068548655286	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATCATAAAGTGTC	8319	False	NA	NA	False	AATAAA	-4	NA	47778799	47726009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47726327_47726467_47726622_47727216_47727298_47728108_47728274_47733882_47734043_47735067_47735181_47736280_47736495_47739506_47739596_47740265_47740353_47741403_47741512_47744440_47744561_47749297_47749424_47750075_47750157_47750380_47750474_47752079_47752287_47754238_47754470_47758818_47758936_47759994_47760100_47761461_47761588_47764458_47764537_47766832_47766917_47768699_47768851_47770717_47770849_47773718_47773869_47775359_47775536_47776750_47776892_47778771
ES.18072.5	chr19	-	3877	15	NNC	ENSMUSG00000044948.18	novel	5968	38	NA	NA	24	3111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.59078981795144	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	47825776	47771907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_47773869_47775359_47775536_47776750_47776892_47779857_47779962_47784041_47784191_47785547_47785629_47790301_47790419_47800506_47800639_47802366_47802435_47804251_47804412_47811467_47811619_47814200_47814369_47818822_47818920_47824002_47824257_47825658
ES.18072.6	chr19	-	276	1	Intergenic	novelGene_14994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGACACACTTAAATACAAC	9771	False	NA	NA	False	AATAAA	-39	NA	47777347	47777071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47777100_47777300
ES.18072.7	chr19	-	353	1	Intergenic	novelGene_14995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAGAACCCGTATGAAA	5165	False	NA	NA	False	NA	NA	NA	47781953	47781600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47781600_47782000
ES.18072.8	chr19	-	1606	8	ISM	ENSMUSG00000044948.18	ENSMUST00000160247.3	5968	38	-11	74814	-11	11283	5prime_fragment	FALSE	canonical	1	1	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAGATGTGGTGGGTT	NA	False	NA	NA	False	AATAAA	-8	NA	47825832	47800109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_47800639_47802366_47802435_47804251_47804412_47811467_47811619_47814200_47814369_47818822_47818920_47824002_47824257_47825653
ES.18072.9	chr19	-	1512	5	FSM	ENSMUSG00000044948.18	ENSMUST00000159204.2	892	5	25	-645	25	645	multi-exon	FALSE	canonical	1	1	junction_1	1.4790199457749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGAGTGGGGGTGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	47825775	47810747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_47811619_47814200_47814369_47818822_47818920_47824002_47824257_47825653
ES.18073.1	chr19	+	1377	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	-138	-57	-138	57	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCTAATTTCTTAAAAA	8330	False	NA	78	True	NA	NA	NA	47843270	47853286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ES.18073.2	chr19	+	872	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	37	273	-23	-50	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCACTGGCTCCTTTCT	8505	False	NA	8	True	NA	NA	NA	47843445	47852956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ES.18073.3	chr19	+	1067	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	39	76	-21	-75	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCATGTCTGAAAACTGT	8507	False	NA	-55	True	AAGAAA	-18	NA	47843447	47853153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ES.18073.4	chr19	+	1966	4	ISM	ENSMUSG00000025068.9	ENSMUST00000237472.2	1138	6	-16	3825	-8	-3363	5prime_fragment	FALSE	canonical	3	347	junction_3	6.68331255192114	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATGGGTTTAACTCATA	8520	False	NA	NA	False	AGTAAA	-17	NA	47843460	47849403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870
ES.18073.5	chr19	+	987	4	ISM	ENSMUSG00000025068.9	ENSMUST00000237472.2	1138	6	-8	4796	0	4268	5prime_fragment	FALSE	canonical	3	347	junction_3	6.68331255192114	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCCGTGTTGAGATAT	8528	False	NA	NA	False	AATATA	-18	NA	47843468	47848432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870
ES.18073.6	chr19	+	3653	5	NIC	ENSMUSG00000025068.9	novel	1182	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	277	junction_3	33.5959446957516	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	8532	False	NA	21	True	ATTAAA	-30	NA	47843472	47853229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47843562_47843653_47846521_47847870_47847970_47851817_47851922_47852735
ES.18073.7	chr19	+	2851	3	NIC	ENSMUSG00000025068.9	novel	950	5	NA	NA	1520	0	combination_of_known_junctions	FALSE	canonical	3	277	junction_1	15.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	NA	False	NA	21	True	ATTAAA	-30	NA	47845716	47853229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47847970_47851817_47851922_47852735
ES.18074.1	chr19	+	1263	9	NNC	ENSMUSG00000025069.16	novel	1351	9	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.05326872164704	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAGTCTAATTATCA	10	True	NA	NA	False	AATAAA	-12	NA	47854270	47874739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_47854369_47858124_47858200_47858647_47858764_47860092_47860243_47860454_47860564_47863268_47863492_47864834_47864937_47873094_47873202_47874456
ES.18074.2	chr19	+	4095	1	NIC	ENSMUSG00000025069.16	novel	1174	8	NA	NA	756	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAGATTCAAAAATGAAG	1	True	NA	NA	False	AGTAAA	-12	NA	47855020	47859115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_47855000_47859100
ES.18075.1	chr19	-	3816	2	NIC	ENSMUSG00000117975.2	novel	351	3	NA	NA	-43	8	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGTTTGCTTTTTACT	6731	False	NA	NA	False	ATTAAA	-24	NA	47907781	47883032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47886630_47907562
ES.18075.2	chr19	-	1928	1	NIC	ENSMUSG00000044948.18	novel	2303	14	NA	NA	100	-94306	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	6886	False	NA	NA	False	NA	NA	NA	47907626	47905698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_47905700_47907600
ES.18076.1	chr19	-	181	1	Intergenic	novelGene_14996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTCATTTGGTT	6561	False	NA	NA	False	NA	NA	NA	47912726	47912545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_47912500_47912700
ES.18077.1	chr19	+	203	1	Intergenic	novelGene_14997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGCAGAAGCTTGAGT	NA	False	NA	NA	False	NA	NA	NA	48121937	48122140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_48121900_48122100
ES.18078.1	chr19	+	2667	1	Intergenic	novelGene_14998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACAGAAACAACC	NA	False	NA	NA	False	AGTAAA	-41	NA	49257126	49259793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_49257100_49259800
ES.18079.1	chr19	-	1521	2	Intergenic	novelGene_14999	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTATTCTCCAAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	51727725	51701678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_51703061_51727586
ES.1808.1	chr1	+	4696	2	FSM	ENSMUSG00000060568.15	ENSMUST00000126198.3	2951	2	-125	-1620	-76	1620	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGTTTTCTTCCTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	166828909	166910313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_166829398_166906105
ES.18080.1	chr19	+	157	1	Intergenic	novelGene_15000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	51729149	51729306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_51729100_51729300
ES.18081.1	chr19	+	3627	2	NNC	ENSMUSG00000118128.2	novel	2705	2	NA	NA	2	999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAGATAGATAGATAGA	NA	False	NA	NA	False	NA	NA	NA	52291960	52298089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_52292074_52294575
ES.18082.1	chr19	+	181	1	Intergenic	novelGene_15001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAAGTCAAGGGA	NA	False	NA	NA	False	NA	NA	NA	52849142	52849323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_52849100_52849300
ES.18083.1	chr19	+	158	1	Intergenic	novelGene_15003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAGTAGATCT	NA	False	NA	NA	False	NA	NA	NA	53025019	53025177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53025000_53025200
ES.18084.10	chr19	-	3636	19	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	354.752339276603	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5117	False	NA	-2	True	AATAAA	-15	NA	53027014	52979612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983875_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.12	chr19	-	5610	17	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_16	352.557087575899	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5157	False	NA	-2	True	AATAAA	-15	NA	53026974	52979612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52994797_52996301_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53026944
ES.18084.15	chr19	-	2414	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	346.57469925063	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5055	False	NA	-3	True	AATAAA	-14	NA	53027076	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988825_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.16	chr19	-	6922	18	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_6	365.993126790834	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5105	False	NA	-3	True	AATAAA	-14	NA	53027026	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52988678_52988819_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.17	chr19	-	2400	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	351.640366710081	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5098	False	NA	-3	True	AATAAA	-14	NA	53027033	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996318_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.19	chr19	-	2430	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	350.541309976442	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5128	False	NA	-3	True	AATAAA	-14	NA	53027003	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013695_53013815_53020439_53020529_53026944
ES.18084.2	chr19	-	2470	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5008	False	NA	0	True	AATAAA	-17	NA	53027123	52979610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.20	chr19	-	2245	18	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_16	364.06014940878	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5061	False	NA	-3	True	AATAAA	-14	NA	53027070	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53013689_53013815_53026944
ES.18084.21	chr19	-	2484	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	441.493431434716	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5057	False	NA	-3	True	AATAAA	-14	NA	53027074	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987589_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993265_52994581_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.22	chr19	-	2487	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	337.852171814834	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5132	False	NA	-3	True	AATAAA	-14	NA	53026999	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020584_53026944
ES.18084.25	chr19	-	5462	17	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_15	369.967729800519	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5138	False	NA	-3	True	AATAAA	-14	NA	53026993	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53013689_53013815_53026944
ES.18084.26	chr19	-	5961	2	NIC	ENSMUSG00000025027.19	novel	1679	6	NA	NA	-1310	0	intron_retention	FALSE	canonical	3	1463	junction_1	0	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	NA	False	NA	-3	True	AATAAA	-14	NA	52986374	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52985505_52986304
ES.18084.27	chr19	-	3833	17	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	16	0	intron_retention	FALSE	canonical	2	17	junction_15	374.550058194829	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5075	False	NA	-3	True	AATAAA	-14	NA	53027056	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_53000341_53000619_53000713_53013689_53013815_53026944
ES.18084.28	chr19	-	1678	14	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	421.542377859404	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5113	False	NA	-3	True	AATAAA	-14	NA	53027018	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991159_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.30	chr19	-	4543	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_19	346.626040839931	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5134	False	NA	-3	True	AATAAA	-14	NA	53026997	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020527_53026944
ES.18084.31	chr19	-	3555	19	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	37	0	intron_retention	FALSE	canonical	3	690	junction_18	182.476651643605	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5096	False	NA	-3	True	AATAAA	-14	NA	53027035	52979613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.32	chr19	-	2279	19	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	359.223721514553	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCTGCTTTGTCTGCCT	5131	False	NA	-4	True	AATAAA	-13	NA	53027000	52979614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53013689_53013815_53026944
ES.18084.33	chr19	-	2426	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	351.39046657529	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5133	False	NA	-5	True	AATAAA	-12	NA	53026998	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990976_52991105_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.36	chr19	-	6194	20	ISM	ENSMUSG00000025027.19	ENSMUST00000183274.8	2120	21	-78	47768	10	-2	5prime_fragment	FALSE	canonical	3	790	junction_18	197.001975607738	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5069	False	NA	-5	True	AATAAA	-12	NA	53027062	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.37	chr19	-	2407	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	337.852171814834	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5142	False	NA	-5	True	AATAAA	-12	NA	53026989	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020516_53026944
ES.18084.38	chr19	-	2692	22	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	426.324304606731	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5078	False	NA	-5	True	AATAAA	-12	NA	53027053	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53021044_53021253_53026944
ES.18084.4	chr19	-	2528	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1553	-3	-20	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	5039	False	NA	0	True	AATAAA	-17	NA	53027092	52979610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.40	chr19	-	3245	23	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	492.483907107969	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5133	False	NA	-5	True	AATAAA	-12	NA	53026998	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53004820_53005551_53005858_53005945_53013689_53013815_53020439_53020529_53026944
ES.18084.42	chr19	-	3707	19	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	8	-2	intron_retention	FALSE	canonical	3	690	junction_18	189.685452757069	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5067	False	NA	-5	True	AATAAA	-12	NA	53027064	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.43	chr19	-	3721	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	2	-2	intron_retention	FALSE	canonical	3	790	junction_18	201.496327716171	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTCTGCTTTGTCTGCC	5142	False	NA	-5	True	AATAAA	-12	NA	53026989	52979615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.44	chr19	-	2280	19	NNC	ENSMUSG00000025027.19	novel	2475	19	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	448.500326878227	973	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTCTGCTTTGTCTG	9686	False	NA	-7	True	AATAAA	-10	NA	53003769	52979617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984755_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53003646
ES.18084.46	chr19	-	2040	21	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	345.136625121125	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGGCTCTGCTTTGT	5057	False	NA	-10	True	AATAAA	-7	NA	53027074	52979620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52979691_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.49	chr19	-	2229	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	4	-183	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAGGGGCCCCACGAA	5063	False	NA	NA	False	AATAAA	-12	NA	53027068	52979796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.5	chr19	-	3872	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348.705028176968	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTGTCTGCCTCTT	5072	False	NA	-1	True	AATAAA	-16	NA	53027059	52979611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52981618_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.50	chr19	-	1544	12	ISM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1577	12311	4	4397	5prime_fragment	FALSE	canonical	3	790	junction_10	230.459655672228	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGACTCTTGGCCATTA	5063	False	NA	NA	False	CATAAA	-13	NA	53027068	52991924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.51	chr19	-	179	1	Intergenic	novelGene_15002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	903	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAAGTTATAGTTGA	3719	False	NA	NA	False	NA	NA	NA	53009736	53009557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53009600_53009700
ES.18084.6	chr19	-	3624	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	790	junction_18	194.389049313676	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTGTCTGCCTCTT	5118	False	NA	-1	True	AATAAA	-16	NA	53027013	52979611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ES.18084.7	chr19	-	2647	22	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_20	424.006021862855	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5115	False	NA	-2	True	AATAAA	-15	NA	53027016	52979612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53021055_53021253_53026944
ES.18084.8	chr19	-	2403	20	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	354.786854197499	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5064	False	NA	-2	True	AATAAA	-15	NA	53027067	52979612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998507_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18084.9	chr19	-	4754	19	NNC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	453.15337182356	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	5062	False	NA	-2	True	AATAAA	-15	NA	53027069	52979612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52988678_52988819_52988892_52990899_52990983_52991109_52991169_52992194_52992246_52993194_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
ES.18085.1	chr19	+	159	1	Antisense	novelGene_ENSMUSG00000025027.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	53028362	53028521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_53028400_53028500
ES.18086.1	chr19	-	204	1	Intergenic	novelGene_15004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTGGTAAAAAAATCTCC	2355	False	NA	NA	False	NA	NA	NA	53036886	53036682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53036700_53036900
ES.18087.1	chr19	+	962	3	Intergenic	novelGene_15006	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTACTTCTCCCAGTTCT	1934	False	NA	NA	False	NA	NA	NA	53040779	53042646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53040985_53041190_53041262_53041960
ES.18088.1	chr19	-	2287	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGAGTCTCTTGGTTTGA	5177	False	NA	NA	False	AATAAA	-20	NA	53052912	53038325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53040340_53050500_53050648_53052786
ES.18088.2	chr19	-	4822	1	Intergenic	novelGene_15005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACGAGTCTCTTGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	53043149	53038327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53038300_53043100
ES.18088.3	chr19	-	1527	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTTGTCTTTCTTGT	5177	False	NA	NA	False	AATAAA	-27	NA	53052912	53039148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53040340_53050437_53050648_53052786
ES.18088.4	chr19	-	1305	2	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTTGTCTTTCTTGT	5189	False	NA	NA	False	AATAAA	-27	NA	53052900	53039148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53040340_53052786
ES.18088.5	chr19	-	1439	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTTGTCTTTCTTGT	5150	False	NA	NA	False	AATAAA	-27	NA	53052939	53039148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53040340_53050500_53050648_53052838
ES.18088.6	chr19	-	2963	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTCTTTAATAGTCT	5178	False	NA	NA	False	ATTAAA	-17	NA	53052911	53047723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53048078_53048163_53050648_53052786
ES.18088.7	chr19	-	2899	3	Antisense	novelGene_ENSMUSG00000099988.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTTTCTTTAATAGTC	5189	False	NA	NA	False	ATTAAA	-16	NA	53052900	53047724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53048078_53048163_53050648_53052838
ES.18089.1	chr19	+	169	1	Intergenic	novelGene_15007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTGATGTG	6327	False	NA	NA	False	NA	NA	NA	53057743	53057912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53057700_53057900
ES.1809.1	chr1	+	178	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAGATACTTTTAA	4090	False	NA	NA	False	NA	NA	NA	167005554	167005732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167005600_167005700
ES.18090.1	chr19	+	381	1	Intergenic	novelGene_15008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAAACAACAA	6811	False	NA	NA	False	NA	NA	NA	53058227	53058608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53058200_53058600
ES.18091.1	chr19	+	187	1	Intergenic	novelGene_15009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAATATCATC	3606	False	NA	NA	False	NA	NA	NA	53088711	53088898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53088700_53088900
ES.18092.1	chr19	+	4168	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-260	146	-42	1	multi-exon	TRUE	canonical	3	178	junction_5	22.1124214791929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACGCTTCTCTTTACTT	2441	False	NA	NA	False	AGTAAA	-15	NA	53131144	53235372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.12	chr19	+	4256	16	NNC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.6333266905803	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTAACGCTTCTCTTTAC	2505	False	NA	NA	False	AGTAAA	-13	NA	53131208	53235370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131521_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219855_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.13	chr19	+	4518	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-196	-268	-18	-44	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTTTATATTCCTA	2505	False	NA	NA	False	NA	NA	NA	53131208	53235786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.15	chr19	+	3116	1	NIC	ENSMUSG00000025026.16	novel	4297	14	NA	NA	-9	-70928	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGTAGTTTATTTTGTT	2514	False	NA	NA	False	ATTAAA	-44	NA	53131217	53134333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131200_53134300
ES.18092.16	chr19	+	3053	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-186	1187	-8	4	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTTTTTATTAGTT	2515	False	NA	NA	False	AATAAA	-16	NA	53131218	53234331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.17	chr19	+	4114	14	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	54.8908545858029	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2517	False	NA	8	True	AATAAA	-17	NA	53131220	53235518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53232740_53232837_53233428
ES.18092.18	chr19	+	3577	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-183	660	-5	-513	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGTCTTGATTTTTGCA	2518	False	NA	NA	False	AATAAA	-33	NA	53131221	53234858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.19	chr19	+	4106	15	NNC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.7042070407703	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2522	False	NA	8	True	AATAAA	-17	NA	53131225	53235518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131521_53205231_53205320_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.2	chr19	+	4308	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-242	-12	-24	12	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGTTTCCATTCAGGA	2459	False	NA	20	True	AATAAA	-29	NA	53131162	53235530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.20	chr19	+	4482	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	73.0349687934942	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTTGGTATAATGGGG	2525	False	NA	7	True	AATAAA	-16	NA	53131228	53235517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131521_53147810_53148064_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.21	chr19	+	4162	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	73.67061829522	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACGCTTCTCTTTACTT	2525	False	NA	NA	False	AGTAAA	-15	NA	53131228	53235372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53220786_53220865_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.22	chr19	+	2603	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-176	1627	2	-436	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATCTCTTTTTATAT	2525	False	NA	NA	False	ACTAAA	-25	NA	53131228	53233891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.23	chr19	+	3499	17	NNC	ENSMUSG00000025026.16	novel	2985	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.9501823864864	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTCCTTTTTTATTA	2525	False	NA	NA	False	AATAAA	-13	NA	53131228	53234328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131521_53147810_53148064_53168420_53168533_53168887_53169078_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
ES.18092.24	chr19	+	2486	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-176	1744	2	-553	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTAGTTAATCGTTAA	2525	False	NA	NA	False	NA	NA	NA	53131228	53233774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.27	chr19	+	2579	1	Intergenic	novelGene_15010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATCCTACCGAGTCC	NA	False	NA	NA	False	NA	NA	NA	53163170	53165749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53163200_53165700
ES.18092.28	chr19	+	2914	16	NNC	ENSMUSG00000025026.16	novel	4426	14	NA	NA	4207	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.7540862173639	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTTTTTATTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	53174233	53234331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53174335_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.29	chr19	+	6999	11	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	30504	-7	intron_retention	FALSE	canonical	3	178	junction_1	24.6716436420438	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGCATTTGGTATA	NA	False	NA	1	True	AATAAA	-10	NA	53216980	53235511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.3	chr19	+	4368	15	NNC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.4561056949795	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTTGGTATAATGGG	2471	False	NA	6	True	AATAAA	-15	NA	53131174	53235516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131607_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.4	chr19	+	3134	2	NNC	ENSMUSG00000025026.16	novel	380	4	NA	NA	1	-15596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGGTATAGCACTATTC	2484	False	NA	NA	False	AATAAA	-17	NA	53131187	53189665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131521_53186864
ES.18092.5	chr19	+	4435	16	NNC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	73.1973284272649	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2484	False	NA	8	True	AATAAA	-17	NA	53131187	53235518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53131521_53147899_53148064_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.6	chr19	+	4325	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	70.764272215732	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTTGGTATAATGGG	2490	False	NA	6	True	AATAAA	-15	NA	53131193	53235516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131521_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.7	chr19	+	4169	14	FSM	ENSMUSG00000025026.16	ENSMUST00000050096.15	4297	14	7	121	7	0	multi-exon	FALSE	canonical	1	4	junction_13	57.745923803991	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2490	False	NA	8	True	AATAAA	-17	NA	53131193	53235518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
ES.18092.8	chr19	+	5324	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	-208	-1062	10	750	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATCTTGGCCGGACTG	2493	False	NA	NA	False	TTTAAA	-23	NA	53131196	53236580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18092.9	chr19	+	4338	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	73.67061829522	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGGTATAATGGGGTT	2496	False	NA	9	True	AATAAA	-18	NA	53131199	53235519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53220786_53220865_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ES.18093.1	chr19	-	150	1	Intergenic	novelGene_15011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53256944	53256794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53256800_53256900
ES.18094.1	chr19	+	2718	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-92	1	-92	-1	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGAGTTGTGTGTTAATG	NA	False	NA	17	True	AATAAA	-22	NA	53298856	53361723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.10	chr19	+	2427	6	FSM	ENSMUSG00000025025.15	ENSMUST00000025998.15	5036	6	86	2523	83	-6	multi-exon	FALSE	canonical	3	12	junction_1	85.2478738737806	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGTCGAGTTGTGTGT	4545	False	NA	12	True	AATAAA	-17	NA	53317974	53361718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53318237_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.11	chr19	+	2171	5	ISM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	1936	-137	941	-2	3prime_fragment	FALSE	canonical	3	202	junction_1	16.2480768092719	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGAGTTGTGTGTTAAT	514	False	NA	16	True	AATAAA	-21	NA	53319779	53361722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.12	chr19	+	1522	1	Intergenic	novelGene_15013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACAGAGTGTTACATT	3362	False	NA	NA	False	TATAAA	-16	NA	53322627	53324149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53322600_53324100
ES.18094.13	chr19	+	203	1	Intergenic	novelGene_15014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATTTTATTTTCAGC	58	False	NA	NA	False	TTTAAA	-11	NA	53329570	53329773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53329600_53329800
ES.18094.14	chr19	+	2704	1	Intergenic	novelGene_15015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	6007	False	NA	NA	False	NA	NA	NA	53336311	53339015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53336300_53339000
ES.18094.15	chr19	+	3401	1	Intergenic	novelGene_15016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTAGTGGAACTTTGC	NA	False	NA	NA	False	AAGAAA	-44	NA	53351729	53355130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53351700_53355100
ES.18094.16	chr19	+	134	1	Intergenic	novelGene_15017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAAAAAC	3088	False	NA	NA	False	NA	NA	NA	53355978	53356112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53356000_53356100
ES.18094.2	chr19	+	2017	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	-15	625	-15	186	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTTGATGCAGCATT	NA	False	NA	NA	False	AATAAA	-16	NA	53298933	53361099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.3	chr19	+	2279	6	NNC	ENSMUSG00000025025.15	novel	1249	2	NA	NA	1332	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	89.9813313971293	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGAGTTGTGTGTTAAT	NA	False	NA	16	True	AATAAA	-21	NA	53302828	53361722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53302939_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.4	chr19	+	197	1	Intergenic	novelGene_15012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAAGAGCTGAATA	83	False	NA	NA	False	NA	NA	NA	53310947	53311144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53310900_53311100
ES.18094.5	chr19	+	2490	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	-11	-139	-11	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4403	False	NA	18	True	AATAAA	-23	NA	53317832	53361724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.6	chr19	+	660	3	FSM	ENSMUSG00000025025.15	ENSMUST00000237837.2	939	3	-57	336	-9	-336	multi-exon	FALSE	canonical	2	5	junction_2	76	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTTCTGTCTCATCCT	4405	False	NA	NA	False	NA	NA	NA	53317834	53320656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53318152_53319781_53319915_53320446
ES.18094.7	chr19	+	1856	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	0	484	0	188	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGATGCAGCATTTG	4414	False	NA	NA	False	AATAAA	-18	NA	53317843	53361101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ES.18094.8	chr19	+	3852	5	NNC	ENSMUSG00000025025.15	novel	2340	6	NA	NA	-7	18023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.1492594594163	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	4452	False	NA	NA	False	NA	NA	NA	53317881	53339015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53318152_53319781_53319915_53334881_53336171_53336381_53337296_53337769
ES.18094.9	chr19	+	2387	6	NNC	ENSMUSG00000025025.15	novel	2340	6	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.2414868415078	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCGAGTTGTGTGTTAAT	4494	False	NA	16	True	AATAAA	-21	NA	53317923	53361722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358630_53358793_53360003
ES.18095.1	chr19	+	127	1	Intergenic	novelGene_15018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCAAAAACTACTG	9889	False	NA	NA	False	NA	NA	NA	53367136	53367263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53367100_53367300
ES.18096.1	chr19	-	4403	1	Antisense	novelGene_ENSMUSG00000025025.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTGGCTGCTATACTG	NA	False	NA	NA	False	AATAAA	-17	NA	53365364	53360961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53361000_53365400
ES.18096.10	chr19	-	2201	7	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	-56	-4	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	110.903361335694	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53379065	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53374803_53374988_53377733_53377854_53378846
ES.18096.11	chr19	-	1745	5	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	2966	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	99.0492301837829	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53374887	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53374803
ES.18096.12	chr19	-	1894	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	89.4212502708389	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53378704	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378591
ES.18096.13	chr19	-	2054	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	-97	-479	-93	-4	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53379102	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
ES.18096.14	chr19	-	3027	4	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	2419	-4	intron_retention	FALSE	canonical	3	8	junction_3	112.035708593287	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53375434	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53373028_53374803
ES.18096.15	chr19	-	1895	6	NNC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	105.615150428336	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTCCAGTGTGTTAA	NA	False	NA	-13	True	AATAAA	-12	NA	53378689	53367831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378591
ES.18096.16	chr19	-	1725	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-19	242	-19	241	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGACCATAATTTCCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	53379028	53368068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ES.18096.17	chr19	-	2426	5	ISM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	242	-197	-43	197	3prime_fragment	FALSE	canonical	3	22	junction_3	91.6446943363335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGTTTCATGATTAA	NA	False	NA	NA	False	AATACA	-24	NA	53378763	53368112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733
ES.18096.18	chr19	-	1854	7	NIC	ENSMUSG00000025024.8	novel	1992	6	NA	NA	-17	188	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	104.802459682755	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAGTACTCAGTGTTT	NA	False	NA	NA	False	AATACA	-15	NA	53379026	53368121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53374803_53374988_53377733_53377854_53378846
ES.18096.19	chr19	-	1494	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-21	475	-21	8	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCCCCTTCTCTGGT	NA	False	NA	0	True	ATTAAA	-24	NA	53379030	53368301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ES.18096.2	chr19	-	7455	2	ISM	ENSMUSG00000025024.8	ENSMUST00000235830.2	1992	6	7640	-5701	7640	5701	3prime_fragment	FALSE	canonical	3	266	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATAATGCAGCCACTC	NA	False	NA	NA	False	NA	NA	NA	53370213	53362119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_53369033_53369671
ES.18096.20	chr19	-	1505	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-99	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.7160836494887	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCCCCTTCTCTGGT	NA	False	NA	0	True	ATTAAA	-24	NA	53378819	53368301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378624
ES.18096.21	chr19	-	1329	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	34	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.6533323739627	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCAAACAAACCATG	NA	False	NA	-26	True	NA	NA	NA	53378971	53368327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53372944_53377729_53377854_53378846
ES.18096.22	chr19	-	2152	5	NNC	ENSMUSG00000025024.8	novel	1478	6	NA	NA	27	-17	intron_retention	FALSE	non_canonical	0	0	junction_1	88.9086609954283	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCAAACAAACCATG	NA	False	NA	-26	True	NA	NA	NA	53378978	53368327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369670_53369826_53371987_53373028_53377733_53377854_53378846
ES.18096.23	chr19	-	5619	2	NIC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-57	443	intron_retention	FALSE	canonical	3	208	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTGCTGACACTGTCA	NA	False	NA	NA	False	NA	NA	NA	53379066	53372454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53377854_53378846
ES.18096.24	chr19	-	6574	1	Genic_Genomic	ENSMUSG00000025024.8	novel	NA	NA	NA	NA	-19	443	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTGCTGACACTGTCA	NA	False	NA	NA	False	NA	NA	NA	53379028	53372454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_53372500_53379000
ES.18096.25	chr19	-	2568	2	ISM	ENSMUSG00000025024.8	ENSMUST00000235830.2	1992	6	1025	4664	1025	413	internal_fragment	FALSE	canonical	3	8	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53376828	53372484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_53373028_53374803
ES.18096.3	chr19	-	2258	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-100	-210	-100	204	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGAGGTAAACTCTTC	NA	False	NA	NA	False	ATTAAA	-44	NA	53379109	53367616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ES.18096.4	chr19	-	2190	6	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-133	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.7160836494887	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTAGTAAACTGAAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	53378853	53367644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378630
ES.18096.5	chr19	-	2886	5	NIC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-21	176	intron_retention	FALSE	canonical	3	184	junction_3	29.8161030317511	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTAGTAAACTGAAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	53379030	53367644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53373028_53377733_53377854_53378846
ES.18096.6	chr19	-	2051	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	-98	-5	-98	-1	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTTAACAAAGGGGCG	NA	False	NA	-3	True	AATAAA	-22	NA	53379107	53367821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ES.18096.7	chr19	-	4531	5	ISM	ENSMUSG00000025024.8	ENSMUST00000235830.2	1992	6	203	4	203	2	3prime_fragment	FALSE	canonical	3	8	junction_4	114.868402966177	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGTTAACAAAGGG	NA	False	NA	-6	True	AATAAA	-19	NA	53377650	53367824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53374803
ES.18096.8	chr19	-	6803	5	NIC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	-132	0	intron_retention	FALSE	canonical	3	22	junction_3	92.9771477299664	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	-8	True	AATAAA	-17	NA	53379141	53367826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53377854_53378846
ES.18096.9	chr19	-	3660	4	NNC	ENSMUSG00000025024.8	novel	1948	6	NA	NA	2828	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	100.933421400226	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	False	NA	-12	True	AATAAA	-13	NA	53375025	53367830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53369033_53369670_53369826_53371987_53372150_53372884
ES.18097.1	chr19	-	146	1	Intergenic	novelGene_15019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	7470	False	NA	NA	False	NA	NA	NA	53383135	53382989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53383000_53383100
ES.18098.1	chr19	-	3028	1	Intergenic	novelGene_15020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCATCAGATGAAGCCT	4320	False	NA	NA	False	NA	NA	NA	53386285	53383257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53383300_53386300
ES.18099.1	chr19	-	158	1	Intergenic	novelGene_15021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	53395441	53395283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53395300_53395400
ES.18099.2	chr19	-	156	2	Intergenic	novelGene_15022	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	53402119	53395283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53395406_53402085
ES.18099.3	chr19	-	178	1	Intergenic	novelGene_15023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAACAAACG	NA	False	NA	NA	False	NA	NA	NA	53402120	53401942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53401900_53402100
ES.181.1	chr1	-	198	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTTATTGTTCAGTA	NA	False	NA	NA	False	TATAAA	-5	NA	22579879	22579681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_22579700_22579900
ES.1810.1	chr1	+	177	1	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGACAAAAAT	NA	False	NA	NA	False	NA	NA	NA	167037021	167037198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167037000_167037200
ES.18100.1	chr19	+	1194	2	NNC	ENSMUSG00000097779.3	novel	1494	2	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGACTGTACTTAAGAC	NA	False	NA	NA	False	AATAAA	-27	NA	53449060	53451150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53449251_53450146
ES.18100.2	chr19	+	908	2	NNC	ENSMUSG00000097779.3	novel	1494	2	NA	NA	14	-284	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATTCATGTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	53449066	53450870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53449251_53450146
ES.18101.1	chr19	-	178	1	Intergenic	novelGene_15024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	53510317	53510139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53510100_53510300
ES.18102.1	chr19	+	2503	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	-38	8	-38	-8	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTGCTTGATCCTGTT	NA	False	NA	71	True	NA	NA	NA	53517501	53530854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
ES.18102.3	chr19	+	2071	5	NNC	ENSMUSG00000034765.7	novel	2473	4	NA	NA	38	-35	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.8331489666492	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAACAAAAAA	NA	False	NA	44	True	NA	NA	NA	53517577	53530827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53517711_53518039_53518128_53522256_53522406_53525887_53526108_53529346
ES.18103.1	chr19	-	173	1	Intergenic	novelGene_15025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53545164	53544991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53545000_53545200
ES.18104.1	chr19	-	920	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	6	-25	6	25	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGGAAGAGTAAAGTG	NA	False	NA	NA	False	NA	NA	NA	53577493	53576573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53576600_53577500
ES.18104.2	chr19	-	679	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	14	208	14	-208	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGATTGTCGGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	53577485	53576806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53576800_53577500
ES.18105.1	chr19	-	169	1	Intergenic	novelGene_15026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2265	False	NA	NA	False	NA	NA	NA	53586782	53586613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53586600_53586800
ES.18106.1	chr19	-	283	1	Intergenic	novelGene_15027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	609	False	NA	NA	False	AATAAA	-21	NA	53588438	53588155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53588200_53588400
ES.18107.1	chr19	+	4514	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-293	630	-293	395	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTACTCACTGGGTTTT	NA	False	NA	127	True	AAAAAG	-18	NA	53588535	53633634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.100	chr19	+	4084	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	30	737	30	288	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTGGTCTTTGCA	NA	False	NA	20	True	ATTAAA	-30	NA	53588858	53633527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.101	chr19	+	4757	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	30	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	218.032327106017	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588858	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632997_53633137
ES.18107.102	chr19	+	4058	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	30	274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	217.954787836414	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGTGTAAATGTGGC	NA	False	NA	6	True	ATTAAA	-16	NA	53588858	53633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630136_53630291_53630470_53632274_53632382_53633137
ES.18107.110	chr19	+	4194	30	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	53	275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	289.841561541251	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGTGTAAATGTGGCC	NA	False	NA	7	True	ATTAAA	-17	NA	53588881	53633514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53631112_53631259_53632274_53632382_53633137
ES.18107.114	chr19	+	4239	1	Intergenic	novelGene_15028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	876	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATCAAGGGAATGGG	NA	False	NA	NA	False	NA	NA	NA	53597378	53601617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53597400_53601600
ES.18107.117	chr19	+	3237	20	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	22204	751	-12865	274	3prime_fragment	FALSE	non_canonical	3	891	junction_4	100.975875454599	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGTGTAAATGTGGC	1663	False	NA	6	True	ATTAAA	-16	NA	53611032	53633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.118	chr19	+	3021	8	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	-535	68	intron_retention	FALSE	canonical	3	1023	junction_1	93.3968928382349	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATTTAGAGTACAC	195	False	NA	NA	False	ACTAAA	-19	NA	53623362	53633307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53624971_53627128_53627237_53627757_53627867_53629192_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.119	chr19	+	2432	4	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	-1496	875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	603.39778661252	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACGGTGAGCATAAGA	7125	False	NA	NA	False	ATTAAA	-20	NA	53630292	53635139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53630470_53631112_53631259_53632274_53632382_53633137
ES.18107.16	chr19	+	2879	21	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-4	8988	-4	350	5prime_fragment	FALSE	non_canonical	3	891	junction_13	78.3163297148175	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATTAAGAAAATAGGAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	53588824	53625276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811
ES.18107.18	chr19	+	4890	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-4	-35	-4	35	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGCTCATTCCTTT	NA	False	NA	NA	False	NA	NA	NA	53588824	53634299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.2	chr19	+	1268	11	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-285	22745	-285	-13407	5prime_fragment	FALSE	canonical	3	969	junction_6	70.1042794699439	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCAGCCATGAAAGAAGAA	NA	False	NA	18	True	AAAACA	-5	NA	53588543	53611519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482
ES.18107.20	chr19	+	4087	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	-1	272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	220.198264094439	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACTTAGTGTAAATGTG	NA	False	NA	4	True	ATTAAA	-14	NA	53588827	53633511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616293_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.22	chr19	+	4092	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	0	275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	295.899413669923	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGTGTAAATGTGGCC	NA	False	NA	7	True	ATTAAA	-17	NA	53588828	53633514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611107_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622544_53624102_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.23	chr19	+	3015	23	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	0	6169	0	3169	5prime_fragment	FALSE	non_canonical	3	891	junction_13	75.8457683625949	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTGAATTTAGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	53588828	53628095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757
ES.18107.31	chr19	+	4085	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	7	338	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_4	226.251004742026	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588835	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.35	chr19	+	4023	28	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	7	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	225.906101133839	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588835	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53622380_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.36	chr19	+	4155	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	7	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	295.85719459198	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588835	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624970_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629964_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.38	chr19	+	3476	24	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	10	341	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	242.342670106305	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTGTTGCTTTCAGTT	NA	False	NA	73	True	ATTAAA	-16	NA	53588838	53633580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.39	chr19	+	3729	24	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	10	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	380.880896198335	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588838	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53606830_53607001_53609044_53609138_53610161_53610250_53611553_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.43	chr19	+	4185	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	11	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	218.032327106017	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588839	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633113
ES.18107.44	chr19	+	3389	19	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	11	10580	11	-1242	5prime_fragment	FALSE	canonical	3	891	junction_13	74.1091329071317	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTATATGTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	53588839	53623684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389
ES.18107.45	chr19	+	4142	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	11	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	350.324199339493	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588839	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606502_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624102_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629736_53629964_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.48	chr19	+	4156	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	222.306164134612	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588840	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624975_53627136_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.5	chr19	+	3912	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	-12	951	-12	74	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAGAGTACACAGTCCT	NA	False	NA	NA	False	ACTAAA	-25	NA	53588816	53633313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.50	chr19	+	4246	30	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	290.83635599609	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTTGCTTTCAGT	NA	False	NA	72	True	ATTAAA	-15	NA	53588840	53633579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53598469_53598562_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.53	chr19	+	4145	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	295.84025094911	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAGAAAGTGTTGCTTT	NA	False	NA	68	True	ATTAAA	-11	NA	53588840	53633575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617683_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624975_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.54	chr19	+	4163	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	347.677122309696	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588840	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616592_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624258_53624811_53624970_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.57	chr19	+	4152	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	220.226240350181	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588840	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624819_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.58	chr19	+	4366	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	338	intron_retention	FALSE	non_canonical	3	891	junction_13	93.7427528063034	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588840	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.61	chr19	+	4606	26	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	12	346	intron_retention	FALSE	non_canonical	3	891	junction_13	84.2000855106454	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588840	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53630470_53632274_53632382_53633137
ES.18107.63	chr19	+	3986	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	13	274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	290.946737095522	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAGTGTAAATGTGGC	NA	False	NA	6	True	ATTAAA	-16	NA	53588841	53633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610163_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630390_53630470_53632274_53632382_53633137
ES.18107.64	chr19	+	2936	18	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	14	338	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_2	276.521134303082	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588842	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.66	chr19	+	2850	20	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	17	340	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	262.900474095766	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTTGCTTTCAGT	NA	False	NA	72	True	ATTAAA	-15	NA	53588845	53633579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.68	chr19	+	4136	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	18	338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	295.662193479419	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588846	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616489_53616580_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.69	chr19	+	4157	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	18	341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	221.520450408037	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTGTTGCTTTCAGTT	NA	False	NA	73	True	ATTAAA	-16	NA	53588846	53633580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630463_53632259_53632382_53633137
ES.18107.70	chr19	+	4176	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	18	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	345.457259458019	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTTTCAGTTAC	NA	False	NA	75	True	ATTAAA	-18	NA	53588846	53633582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607294_53609009_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629440_53629528_53629742_53629955_53630148_53630291_53630470_53632271_53632382_53633137
ES.18107.72	chr19	+	4141	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	18	339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.301344474346	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAAGTGTTGCTTTCAG	NA	False	NA	71	True	ATTAAA	-14	NA	53588846	53633578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589919_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.76	chr19	+	3993	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	20	338	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_17	225.906101133839	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588848	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.8	chr19	+	4400	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	-10	340	intron_retention	FALSE	non_canonical	3	891	junction_12	90.6961795345722	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTTGCTTTCAGT	NA	False	NA	72	True	ATTAAA	-15	NA	53588818	53633579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.80	chr19	+	4224	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	28	338	intron_retention	FALSE	non_canonical	3	891	junction_13	89.7709018268994	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588856	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.81	chr19	+	5499	28	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	28	339	intron_retention	FALSE	non_canonical	0	0	junction_18	225.976236049854	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAAGTGTTGCTTTCAG	NA	False	NA	71	True	ATTAAA	-14	NA	53588856	53633578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624099_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.82	chr19	+	4226	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	29	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	222.296189043504	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTTTCAGTTAC	NA	False	NA	75	True	ATTAAA	-18	NA	53588857	53633582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629828_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.87	chr19	+	4146	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	29	339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	293.348385900117	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAAGTGTTGCTTTCAG	NA	False	NA	71	True	ATTAAA	-14	NA	53588857	53633578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624975_53627128_53627237_53627757_53627867_53629192_53629441_53629522_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.9	chr19	+	5741	28	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	-10	346	intron_retention	FALSE	canonical	3	891	junction_13	93.7151947280061	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTTTCAGTTACTAG	NA	False	NA	78	True	ATTAAA	-21	NA	53588818	53633585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.91	chr19	+	4776	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	29	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	293.348385900117	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCCTGTGTGTAATTCA	NA	False	NA	NA	False	CATAAA	-11	NA	53588857	53634261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624949_53627150_53627237_53627757_53627867_53629192_53629442_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.94	chr19	+	3521	25	NIC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	30	340	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	237.234936150972	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTTGCTTTCAGT	NA	False	NA	72	True	ATTAAA	-15	NA	53588858	53633579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.96	chr19	+	4116	29	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	30	338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	219.802610312071	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAAGTGTTGCTTTCA	NA	False	NA	70	True	ATTAAA	-13	NA	53588858	53633577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629546_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18107.97	chr19	+	4099	28	NNC	ENSMUSG00000024974.11	novel	4851	29	NA	NA	30	339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	353.937952294006	1038	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAAGTGTTGCTTTCAG	NA	False	NA	71	True	ATTAAA	-14	NA	53588858	53633578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53588986_53589913_53589990_53602245_53602277_53603536_53603605_53606855_53606978_53607201_53607281_53609019_53609138_53610159_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ES.18108.1	chr19	-	272	1	Intergenic	novelGene_15029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGATTTGCAGTGGTTA	1842	False	NA	NA	False	NA	NA	NA	53598167	53597895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53597900_53598200
ES.18108.2	chr19	-	157	1	Intergenic	novelGene_15030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	1843	False	NA	NA	False	NA	NA	NA	53598166	53598009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53598000_53598200
ES.18109.1	chr19	-	171	1	Intergenic	novelGene_15031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTGGCCTAAA	NA	False	NA	NA	False	NA	NA	NA	53610790	53610619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53610600_53610800
ES.1811.1	chr1	+	3759	1	NIC	ENSMUSG00000103139.2	novel	561	4	NA	NA	4045	-1232	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAAGATGTGCCAGG	NA	False	NA	NA	False	NA	NA	NA	167074070	167077829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167074100_167077800
ES.18110.1	chr19	-	159	1	Intergenic	novelGene_15032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	53632752	53632593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53632600_53632800
ES.18111.1	chr19	+	2625	1	Intergenic	novelGene_15033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAACGGGAAGTTCAAAT	3072	False	NA	NA	False	NA	NA	NA	53642420	53645045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53642400_53645000
ES.18112.1	chr19	+	238	1	Intergenic	novelGene_15034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGAATATTAAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	53656579	53656817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53656600_53656800
ES.18113.1	chr19	+	4099	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	-98	891	-98	-891	multi-exon	FALSE	canonical	1	3	junction_1	4.75805141359757	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCACTGTGTTTCAAG	4643	False	NA	NA	False	CATAAA	-16	NA	53665638	53852920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.10	chr19	+	6455	14	NIC	ENSMUSG00000043639.16	novel	4663	7	NA	NA	-16	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.95303385600161	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGAGTGGCTGTGTCA	9889	False	NA	5	True	AATAAA	-13	NA	53781722	53855506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53781878_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.11	chr19	+	3829	14	NIC	ENSMUSG00000043639.16	novel	4663	7	NA	NA	24	-891	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.95303385600161	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCACTGTGTTTCAAG	9929	False	NA	NA	False	CATAAA	-16	NA	53781762	53852920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53781878_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.12	chr19	+	914	1	Intergenic	novelGene_15039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATCCCAAAGGTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	53792758	53793672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53792800_53793700
ES.18113.13	chr19	+	4339	2	ISM	ENSMUSG00000043639.16	ENSMUST00000161856.2	4663	7	14966	0	14966	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTGTGTCATGCAG	NA	False	NA	10	True	AATAAA	-18	NA	53846606	53855511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53847945_53852510
ES.18113.2	chr19	+	6548	13	NIC	ENSMUSG00000043639.16	novel	4892	14	NA	NA	-40	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	5.01386965216377	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGTGTCATGCAGGGG	4701	False	NA	13	True	AATAAA	-21	NA	53665696	53855514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.3	chr19	+	6602	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	-8	-1702	-8	2	multi-exon	FALSE	canonical	1	3	junction_1	4.75805141359757	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTGTGTCATGCAGGG	4733	False	NA	12	True	AATAAA	-20	NA	53665728	53855513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.4	chr19	+	194	1	Intergenic	novelGene_15035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTGTATTATATCCCA	3035	False	NA	NA	False	NA	NA	NA	53680445	53680639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53680400_53680600
ES.18113.5	chr19	+	240	1	Intergenic	novelGene_15036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAAAACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	53690726	53690966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53690700_53691000
ES.18113.6	chr19	+	4890	14	NNC	ENSMUSG00000043639.16	novel	4663	7	NA	NA	34356	-10006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.49852046683491	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTTAATTGTCTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	53700092	53843805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53700386_53700598_53700687_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53842478
ES.18113.7	chr19	+	184	1	Intergenic	novelGene_15037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53712352	53712536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53712400_53712500
ES.18113.8	chr19	+	6459	15	NNC	ENSMUSG00000043639.16	novel	4663	7	NA	NA	49489	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.30113580436556	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCTGTGTCATGCAG	NA	False	NA	10	True	AATAAA	-18	NA	53715225	53855511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53715302_53719326_53719405_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18113.9	chr19	+	6483	15	NNC	ENSMUSG00000043639.16	novel	4663	7	NA	NA	-34723	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.30113580436556	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTGTGTCATGCA	7774	False	NA	9	True	AATAAA	-17	NA	53747015	53855510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53747063_53747860_53747993_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ES.18114.1	chr19	-	397	2	Antisense	novelGene_ENSMUSG00000043639.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	53753091	53752121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_53752337_53752909
ES.18115.1	chr19	-	176	1	Intergenic	novelGene_15038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTGATTAATCAAT	77	False	NA	NA	False	NA	NA	NA	53791766	53791590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53791600_53791800
ES.18116.1	chr19	-	7317	2	FSM	ENSMUSG00000089679.2	ENSMUST00000162724.2	2766	2	-1	-4550	-1	4550	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGGCAAGTTCTGTTC	NA	False	NA	NA	False	AGTAAA	-17	NA	53813560	53803234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53810514_53813522
ES.18116.2	chr19	-	4279	2	NNC	ENSMUSG00000089679.2	novel	2766	2	NA	NA	8	2356	intron_retention	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTTCTGCTCACAGCA	NA	False	NA	NA	False	NA	NA	NA	53813551	53805428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53809679_53813522
ES.18116.3	chr19	-	5039	2	FSM	ENSMUSG00000089679.2	ENSMUST00000162724.2	2766	2	11	-2284	11	2284	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCCCTATATGTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	53813548	53805500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53810514_53813522
ES.18116.4	chr19	-	2277	1	NIC	ENSMUSG00000089679.2	novel	2766	2	NA	NA	12	-3486	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGACATTTAAAGTACCT	NA	False	NA	NA	False	AATAAA	-27	NA	53813547	53811270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53811300_53813500
ES.18117.1	chr19	-	178	1	Intergenic	novelGene_15040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	53838345	53838167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53838200_53838300
ES.18118.1	chr19	+	1855	13	FSM	ENSMUSG00000024975.14	ENSMUST00000165617.3	1733	13	-116	-6	1	-1	multi-exon	FALSE	canonical	2	5	junction_12	33.2949779329489	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGAGTGCATTTATTGT	469	False	NA	21	True	AATAAA	-26	NA	53891730	53918290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513_53917624_53918147
ES.18118.10	chr19	+	135	1	Intergenic	novelGene_15041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4154	False	NA	NA	False	NA	NA	NA	53911525	53911660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_53911500_53911700
ES.18118.2	chr19	+	2355	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	25	1	25	-1	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGAGTGCATTTATTGT	493	False	NA	21	True	AATAAA	-26	NA	53891754	53918290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ES.18118.3	chr19	+	2112	10	NIC	ENSMUSG00000024975.14	novel	2381	12	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_1	51.6414514336385	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	510	False	NA	13	True	AATAAA	-18	NA	53891771	53918282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53891920_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53915624_53915765_53917513
ES.18118.4	chr19	+	4065	11	ISM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	55	10	-21	-1	intron_retention	FALSE	canonical	3	114	junction_5	6.09015599143405	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTTTAGTGGGAGTGC	523	False	NA	12	True	AATAAA	-17	NA	53891784	53918281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624
ES.18118.6	chr19	+	2962	12	NNC	ENSMUSG00000024975.14	novel	2381	12	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_6	47.9034842329125	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCTTTAGTGGGAGTG	570	False	NA	11	True	AATAAA	-16	NA	53891831	53918280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53892610_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908272_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ES.18118.7	chr19	+	2153	11	NIC	ENSMUSG00000024975.14	novel	2381	12	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_9	37.7444035586734	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTTAGTGGGAGTGCA	576	False	NA	13	True	AATAAA	-18	NA	53891837	53918282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53915624_53915765_53917513
ES.18118.9	chr19	+	5379	1	NIC	ENSMUSG00000024975.14	novel	2408	12	NA	NA	7540	-13101	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATAGGGGAGAA	5570	False	NA	NA	False	NA	NA	NA	53899386	53904765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53899400_53904800
ES.18119.1	chr19	+	4135	9	NNC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	-305	1	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	129.893947126107	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTGTGGTGTTTT	3053	False	NA	24	True	TATAAA	-27	NA	53932431	54021565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53932733_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.10	chr19	+	3641	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	3874	False	NA	NA	False	ATTAAA	-20	NA	53933252	54021298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.11	chr19	+	3758	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	-57	264	-50	0	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	3875	False	NA	NA	False	ATTAAA	-20	NA	53933253	54021298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.12	chr19	+	4024	10	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-50	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	163.616383616233	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	3875	False	NA	16	True	TATAAA	-19	NA	53933253	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53938249_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.13	chr19	+	2220	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-46	-1416	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATATAAGTTTTCTTT	3879	False	NA	NA	False	AATAGA	-45	NA	53933257	54019882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.14	chr19	+	5677	8	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-46	147	intron_retention	FALSE	canonical	3	220	junction_1	65.3773973299079	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTCCCTACATTTA	3879	False	NA	13	True	AATATA	-15	NA	53933257	54021711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54018038_54018291_54018410_54019498
ES.18119.16	chr19	+	4168	10	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-42	145	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	163.616383616233	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGTTTCCCTACATT	3883	False	NA	11	True	AATATA	-13	NA	53933261	54021709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53938249_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.17	chr19	+	3874	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.897878041132	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGCTTGTGTGTGTGGTG	3890	False	NA	20	True	TATAAA	-23	NA	53933268	54021561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014794_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.18	chr19	+	7375	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-34	3485	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGGCTGAGGTTTGT	3891	False	NA	NA	False	NA	NA	NA	53933269	54025049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.2	chr19	+	3841	9	NNC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	-281	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	129.893947126107	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGGATTTTTGCTT	3077	False	NA	NA	False	ATTAAA	-17	NA	53932455	54021295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53932733_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.20	chr19	+	3515	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-30	-105	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTGCTGCTTGTTCTT	3895	False	NA	NA	False	AATGAA	-19	NA	53933273	54021193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.21	chr19	+	2797	7	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.15027842936	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3910	False	NA	17	True	TATAAA	-20	NA	53933288	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.23	chr19	+	3732	8	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	138.755106543279	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	3911	False	NA	16	True	TATAAA	-19	NA	53933289	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.27	chr19	+	3872	8	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-10	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.524441493853	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGGTTTCCCTACAT	3915	False	NA	10	True	AATATA	-12	NA	53933293	54021708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.28	chr19	+	5026	8	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	1	-6	intron_retention	FALSE	canonical	3	220	junction_1	64.3580545361144	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTAGAGCTTGTGTGTG	3926	False	NA	15	True	TATAAA	-18	NA	53933304	54021556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.29	chr19	+	3848	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3927	False	NA	17	True	TATAAA	-20	NA	53933305	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.3	chr19	+	2610	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-246	1300	-246	-1300	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGTATAGTTAAATAT	3112	False	NA	NA	False	ATTAAA	-11	NA	53932490	54019998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.30	chr19	+	4232	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	-4	-263	3	261	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGTACTGTCAACCT	3928	False	NA	NA	False	AATACA	-35	NA	53933306	54021825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.31	chr19	+	4118	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	-4	-149	3	147	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTCCCTACATTTA	3928	False	NA	13	True	AATATA	-15	NA	53933306	54021711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.32	chr19	+	3969	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	-2	-2	-2	0	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTGTGGTGTTT	3930	False	NA	23	True	TATAAA	-26	NA	53933308	54021564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.34	chr19	+	4086	10	NIC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	163.824959282615	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3932	False	NA	17	True	TATAAA	-20	NA	53933310	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53933445_53938249_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.35	chr19	+	3024	8	NIC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	141.415006564483	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3939	False	NA	17	True	TATAAA	-20	NA	53933317	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53933445_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.36	chr19	+	2090	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	10	2954	5	196	5prime_fragment	FALSE	canonical	3	29	junction_1	130.009261836476	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATTTATAAACAAATGTT	3942	False	NA	NA	False	AATAAA	-3	NA	53933320	54018608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291
ES.18119.37	chr19	+	4075	10	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.886172486504	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGCTTGTGTGTGTGGTG	3951	False	NA	20	True	TATAAA	-23	NA	53933329	54021561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933445_53949403_53949534_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.38	chr19	+	3970	9	NIC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	4915	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	129.893947126107	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	8852	False	NA	16	True	TATAAA	-19	NA	53938230	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.39	chr19	+	3689	9	NIC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	4932	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	129.893947126107	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACATTTGGATTTTTGC	8869	False	NA	NA	False	ATTAAA	-15	NA	53938247	54021293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.4	chr19	+	4159	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-236	-259	-236	-5	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	3122	False	NA	16	True	TATAAA	-19	NA	53932500	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.40	chr19	+	2721	9	NIC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	4932	-973	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	129.893947126107	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCCATTAGTTTTAT	8869	False	NA	NA	False	AATATA	-13	NA	53938247	54020325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.41	chr19	+	3953	9	NNC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	16086	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.513914363738	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTACCTAGAGCTTGTG	3484	False	NA	11	True	TATAAA	-14	NA	53949401	54021552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53949534_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.42	chr19	+	3835	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	-2	-513	0	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTGTGGTGTTT	NA	False	NA	23	True	TATAAA	-26	NA	53975882	54021564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.44	chr19	+	4744	7	NIC	ENSMUSG00000024976.15	novel	3664	9	NA	NA	-513	-4	intron_retention	FALSE	canonical	3	368	junction_1	20.7906228862918	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATTTGGATTTTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	53975882	54021294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.45	chr19	+	3567	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	266	-513	-2	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGGATTTTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	53975882	54021296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.46	chr19	+	3697	7	NIC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-513	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	144.778854349199	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	NA	False	NA	16	True	TATAAA	-19	NA	53975882	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53976815_53991439_53991578_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.47	chr19	+	3460	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	373	-513	-109	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAATATTGCTGCTTGT	NA	False	NA	NA	False	AATGAA	-15	NA	53975882	54021189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.48	chr19	+	1977	7	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	2945	-513	205	internal_fragment	FALSE	canonical	3	368	junction_1	21.0528435661842	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAATGTTTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	53975882	54018617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291
ES.18119.49	chr19	+	2142	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	1691	-513	-1427	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGGCTTATAT	NA	False	NA	NA	False	AATAGA	-34	NA	53975882	54019871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.5	chr19	+	2303	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-65	1426	-65	-1426	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCTTATATA	3293	False	NA	NA	False	AATAGA	-35	NA	53932671	54019872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.50	chr19	+	5403	6	NIC	ENSMUSG00000024976.15	novel	3664	9	NA	NA	-513	-973	intron_retention	FALSE	canonical	3	368	junction_1	22.1864823710294	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCCATTAGTTTTAT	NA	False	NA	NA	False	AATATA	-13	NA	53975882	54020325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54018038_54018291_54018410_54019498
ES.18119.51	chr19	+	3979	8	ISM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	42572	-146	-513	144	3prime_fragment	FALSE	canonical	3	368	junction_1	19.5333310115854	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGGTTTCCCTACAT	NA	False	NA	10	True	AATATA	-12	NA	53975882	54021708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.52	chr19	+	5007	7	NIC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-513	-5	intron_retention	FALSE	canonical	3	368	junction_1	20.7906228862918	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGAGCTTGTGTGTGT	NA	False	NA	16	True	TATAAA	-19	NA	53975882	54021557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_53976815_53991439_53991578_54005979_54006111_54014780_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.53	chr19	+	2863	7	NNC	ENSMUSG00000024976.15	novel	3664	9	NA	NA	6701	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.15027842936	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	NA	False	NA	17	True	TATAAA	-20	NA	53998217	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53998322_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.54	chr19	+	2241	3	ISM	ENSMUSG00000024976.15	ENSMUST00000237908.2	2976	7	41108	269	26195	-3	3prime_fragment	FALSE	canonical	3	377	junction_1	11.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGGATTTTTGCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	54017711	54021295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_54018038_54018291_54018410_54019498
ES.18119.6	chr19	+	3710	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-49	3	-49	-3	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGGATTTTTGCTT	3309	False	NA	NA	False	ATTAAA	-17	NA	53932687	54021295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.7	chr19	+	4122	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	-45	-413	-45	147	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTCCCTACATTTA	3313	False	NA	13	True	AATATA	-15	NA	53932691	54021711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.8	chr19	+	3915	10	NNC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.886172486504	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	3315	False	NA	17	True	TATAAA	-20	NA	53932693	54021558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53932733_53932865_53932915_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.18119.9	chr19	+	4056	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	-55	145	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGTTTCCCTACATT	3870	False	NA	11	True	AATATA	-13	NA	53933248	54021709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ES.1812.1	chr1	+	5778	1	Antisense	novelGene_ENSMUSG00000026558.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	167088643	167094421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_167088600_167094400
ES.18120.1	chr19	-	4435	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	150	-2542	1	2542	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGAGTTGTTTGGAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	53932908	53915749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ES.18120.10	chr19	-	1786	1	NIC	ENSMUSG00000084957.4	novel	838	5	NA	NA	10000	498	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53922611	53920825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53920800_53922600
ES.18120.2	chr19	-	5913	1	Genic_Genomic	ENSMUSG00000084957.4	novel	NA	NA	NA	NA	8890	483	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	53923721	53917808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_53917800_53923700
ES.18120.3	chr19	-	2401	4	NNC	ENSMUSG00000084957.4	novel	2120	4	NA	NA	-3	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	84.2060963747083	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGTGTTTCACATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	53932641	53918284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53919934_53920560_53921144_53931896_53932011_53932586
ES.18120.4	chr19	-	2555	5	NNC	ENSMUSG00000084957.4	novel	787	5	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4990384473141	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCAACAGTGTTTCACA	NA	False	NA	NA	False	AATAAA	-15	NA	53932902	53918288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53919929_53920560_53921187_53921881_53922002_53931896_53932011_53932847
ES.18120.5	chr19	-	1672	5	NNC	ENSMUSG00000084957.4	novel	787	5	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.5385390104472	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGGCTTGTACACT	NA	False	NA	NA	False	AATAAA	-15	NA	53933079	53919442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_53919934_53920560_53921276_53921881_53922002_53931896_53932011_53932847
ES.18120.6	chr19	-	790	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	-37	-91	-34	1	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGGGCTTGTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	53932696	53919443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
ES.18120.7	chr19	-	5404	1	NIC	ENSMUSG00000084957.4	novel	2043	4	NA	NA	7763	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTTGGGCTTGTACA	NA	False	NA	NA	False	AATAAA	-13	NA	53924848	53919444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_53919400_53924800
ES.18120.8	chr19	-	713	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	175	1155	8	-2	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTGTTGGGCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	53932883	53919446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ES.18120.9	chr19	-	677	3	FSM	ENSMUSG00000084957.4	ENSMUST00000235688.2	613	3	-70	6	-52	-2	multi-exon	FALSE	canonical	0	0	junction_2	103	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTGTTGGGCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	53932961	53919446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_53919934_53920560_53920637_53932847
ES.18121.1	chr19	-	769	1	Intergenic	novelGene_15042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53983307	53982538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53982500_53983300
ES.18122.1	chr19	-	1967	1	Intergenic	novelGene_15043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACTGGTGATTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	53994481	53992514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_53992500_53994500
ES.18123.1	chr19	-	5085	1	Intergenic	novelGene_15044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAATTAATGTGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	54013872	54008787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_54008800_54013900
ES.18124.1	chr19	+	3411	2	FSM	ENSMUSG00000033717.7	ENSMUST00000237285.2	3592	2	170	11	170	-11	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTAAGTGGGCCTCCTG	NA	False	NA	NA	False	AATAAA	-29	NA	54033860	54037400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_54034209_54034337
ES.18125.1	chr19	-	4935	1	Intergenic	novelGene_15045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTGAACTATGTGTGG	NA	False	NA	NA	False	AATAAA	-38	NA	54112116	54107181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_54107200_54112100
ES.18126.1	chr19	-	5967	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-36	-2099	-36	1	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTTAATGTCTTGGA	8967	False	NA	1	True	AATAAA	-20	NA	55087919	55056066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.12	chr19	-	5934	21	NNC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	-24	-14	intron_retention	FALSE	non_canonical	0	0	junction_18	18.2353365749031	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCCGACTGAT	8979	False	NA	-14	True	AATAAA	-5	NA	55087907	55056081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084558_55084676_55085928_55086060_55087760
ES.18126.14	chr19	-	5906	21	NNC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	-5	-23	intron_retention	FALSE	canonical	0	0	junction_17	18.3234139832074	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAACCAGAAAAAAAAAAC	8998	False	NA	-23	True	NA	NA	NA	55087888	55056090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079676_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.15	chr19	-	4807	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-25	-950	-25	950	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAAGCTGCACTCTGC	8978	False	NA	NA	False	AATAAA	-20	NA	55087908	55057215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.16	chr19	-	3842	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-18	8	-18	-8	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTACTTTCCTGAACT	8985	False	NA	NA	False	GATAAA	-15	NA	55087901	55058173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.17	chr19	-	3018	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	-8	822	-8	85	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGGGCCATCCATTCT	8995	False	NA	NA	False	TTTAAA	-1	NA	55087891	55058987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.19	chr19	-	6328	17	NIC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	19	-2525	intron_retention	FALSE	canonical	3	55	junction_1	8.74642784226795	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	9022	False	NA	NA	False	NA	NA	NA	55087864	55061597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928
ES.18126.2	chr19	-	5904	21	NNC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_3	18.3382114722238	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTTAATGTCTTGGA	9001	False	NA	1	True	AATAAA	-20	NA	55087885	55056066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55059479_55061143_55061203_55063002_55063193_55064002_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.4	chr19	-	6101	21	NNC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_2	18.1004834189587	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTGATTTTTAATGTC	9001	False	NA	-4	True	AATAAA	-15	NA	55087885	55056071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55059479_55061143_55061376_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ES.18126.7	chr19	-	5995	22	NNC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	-12	-4	intron_retention	FALSE	canonical	0	0	junction_18	22.7895826939652	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTGATTTTTAATGTC	8991	False	NA	-4	True	AATAAA	-15	NA	55087895	55056071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084203_55084261_55084552_55084676_55085928_55086060_55087760
ES.18126.8	chr19	-	5852	20	NIC	ENSMUSG00000024978.12	novel	3832	21	NA	NA	0	-4	intron_retention	FALSE	canonical	1	1	junction_17	18.4656602757194	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTGATTTTTAATGTC	9003	False	NA	-4	True	AATAAA	-15	NA	55087883	55056071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55084552_55084676_55085928_55086060_55087760
ES.18127.1	chr19	-	151	1	Intergenic	novelGene_15046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55197377	55197226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_55197200_55197400
ES.18128.1	chr19	+	3442	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	-292	1093	-292	949	multi-exon	TRUE	canonical	3	56	junction_1	11.2473730871055	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGCCTGCAGTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	55241508	55285059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ES.18128.2	chr19	+	2770	22	NNC	ENSMUSG00000024981.7	novel	4243	22	NA	NA	250	949	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	18.582902438493	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGCCTGCAGTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	55242050	55285059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55242599_55257205_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ES.18128.3	chr19	+	2231	19	NNC	ENSMUSG00000024981.7	novel	4243	22	NA	NA	546	949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	20	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGCCTGCAGTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	55242346	55285059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279929_55283264_55283337_55283804_55283955_55284797
ES.18128.5	chr19	+	2250	19	NNC	ENSMUSG00000024981.7	novel	4243	22	NA	NA	726	948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	21.4678197297867	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGCCTGCAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	55242526	55285058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269030_55271731_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ES.18128.6	chr19	+	5044	19	ISM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	21549	1096	2048	946	3prime_fragment	FALSE	canonical	3	63	junction_1	10.6795350617807	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTGTGCCTGCAGTC	9363	False	NA	NA	False	AATAAA	-12	NA	55263349	55285056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ES.18128.7	chr19	+	1197	10	NNC	ENSMUSG00000024981.7	novel	4243	22	NA	NA	3589	949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.5980854587353	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGCCTGCAGTCTTG	9732	False	NA	NA	False	AATAAA	-15	NA	55276354	55285059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283752_55283955_55284797
ES.18129.1	chr19	-	7892	16	NNC	ENSMUSG00000024982.11	novel	2647	18	NA	NA	4	8234	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	253.401096200383	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAATTATAT	7465	False	NA	NA	False	NA	NA	NA	55304438	55251488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55256116_55257557_55258166_55258265_55258360_55259108_55259962_55262149_55262200_55262450_55262557_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.10	chr19	-	4269	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	9	-2110	3	721	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACGTAGTTTGTTTTA	7448	False	NA	NA	False	CATAAA	-14	NA	55304455	55284622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.11	chr19	-	3770	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	3	-1605	1	216	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCCATATGATTCTT	7442	False	NA	NA	False	NA	NA	NA	55304461	55285127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.12	chr19	-	3719	10	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-2	213	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	165.528856907597	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCCGGCCATATGATT	7443	False	NA	NA	False	NA	NA	NA	55304460	55285130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.13	chr19	-	2262	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	-3	-91	-3	91	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACATTGCCCTGCT	7436	False	NA	84	True	AGTAAA	-20	NA	55304467	55286641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.14	chr19	-	2365	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	1	-103	1	84	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCCTTATGAAAACATTG	7442	False	NA	77	True	AGTAAA	-13	NA	55304461	55286648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ES.18129.15	chr19	-	2396	11	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.198547209108	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	7457	False	NA	-2	True	AATAAA	-43	NA	55304446	55286727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303986
ES.18129.16	chr19	-	2448	11	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	164.078517789502	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	7460	False	NA	-2	True	AATAAA	-43	NA	55304443	55286727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303931
ES.18129.17	chr19	-	5145	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	-35	-2507	3	5	multi-exon	FALSE	canonical	0	0	junction_1	163.592298107215	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	7448	False	NA	-2	True	AATAAA	-43	NA	55304455	55286727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55290302_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.18	chr19	-	5833	10	ISM	ENSMUSG00000024982.11	ENSMUST00000225495.2	1711	11	-27	1384	3	5	5prime_fragment	FALSE	canonical	3	431	junction_5	62.5064934898372	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	7448	False	NA	-2	True	AATAAA	-43	NA	55304455	55286727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.19	chr19	-	2472	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	162.940602674717	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTGTTTTTAGTT	7466	False	NA	-7	True	AATAAA	-38	NA	55304437	55286732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55297843_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.2	chr19	-	3492	18	NNC	ENSMUSG00000024982.11	novel	2647	18	NA	NA	4	2667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	262.36370328757	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAAAAGTTAGAGGAA	7465	False	NA	NA	False	NA	NA	NA	55304438	55257055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55258166_55258265_55258360_55259108_55259241_55259873_55259962_55262149_55262200_55262450_55262557_55278017_55278117_55287126_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298109_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.22	chr19	-	5424	1	NIC	ENSMUSG00000024982.11	novel	2647	18	NA	NA	-637	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGCATTGTTTTTAG	NA	False	NA	-9	True	AATAAA	-36	NA	55292158	55286734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55286700_55292200
ES.18129.23	chr19	-	3842	9	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	6	5	intron_retention	FALSE	canonical	1	2	junction_6	177.553337056784	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTTTCACCAAAAAG	7451	False	NA	-21	True	AATAAA	-24	NA	55304452	55286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55292171_55292841_55293010_55297335_55298337_55300056_55300272_55301620_55301713_55302732_55303205_55304227
ES.18129.24	chr19	-	4628	9	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-5	5	intron_retention	FALSE	canonical	3	443	junction_7	59.888959750525	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTTTCACCAAAAAG	7470	False	NA	-21	True	AATAAA	-24	NA	55304433	55286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.25	chr19	-	2201	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	164.730567898007	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTTTCACCAAAAAG	7447	False	NA	-21	True	AATAAA	-24	NA	55304456	55286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300272_55301620_55301713_55302732_55303205_55304227
ES.18129.26	chr19	-	2432	11	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	162.400615762379	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTTTCACCAAAAAG	7440	False	NA	-21	True	AATAAA	-24	NA	55304463	55286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303948
ES.18129.27	chr19	-	2170	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	-20	18	-20	1	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATAGTTTTCACCAA	7419	False	NA	-25	True	AATAAA	-20	NA	55304484	55286750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.28	chr19	-	1967	10	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	171.341187310978	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7459	False	NA	-26	True	AATAAA	-19	NA	55304444	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.29	chr19	-	2115	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.592298107215	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7489	False	NA	-26	True	AATAAA	-19	NA	55304414	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290973_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.3	chr19	-	4582	11	NIC	ENSMUSG00000024982.11	novel	3357	15	NA	NA	1	2016	intron_retention	FALSE	canonical	1	8	junction_1	161.357863148965	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTATTCTCATTCTTCT	7442	False	NA	NA	False	AATAAA	-26	NA	55304461	55265989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55268995_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.30	chr19	-	2928	10	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	443	junction_8	56.5163583879225	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7445	False	NA	-26	True	AATAAA	-19	NA	55304458	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.32	chr19	-	3165	10	ISM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	5	0	1	0	intron_retention	FALSE	canonical	3	431	junction_6	62.2928170957807	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7446	False	NA	-26	True	AATAAA	-19	NA	55304457	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ES.18129.33	chr19	-	3011	9	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	443	junction_7	54.5777827966655	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7448	False	NA	-26	True	AATAAA	-19	NA	55304455	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55290989_55291269_55292128_55292171_55292841_55293010_55297335_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.34	chr19	-	2062	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	165.293073055104	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7479	False	NA	-26	True	AATAAA	-19	NA	55304424	55286751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300209_55301659_55301713_55302732_55303205_55304227
ES.18129.35	chr19	-	1976	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.198547209108	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTATAGTTTTCACC	7448	False	NA	-27	True	AATAAA	-18	NA	55304455	55286752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304390
ES.18129.36	chr19	-	2371	10	NNC	ENSMUSG00000024982.11	novel	2263	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	212.976785380734	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTATAGTTTTCACC	7448	False	NA	-27	True	AATAAA	-18	NA	55304455	55286752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303948
ES.18129.37	chr19	-	1720	10	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	221.391279786337	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATTATAGTTTTCAC	7443	False	NA	-28	True	AATAAA	-17	NA	55304460	55286753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287060_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.38	chr19	-	2259	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	2	2	-2	-2	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATTATAGTTTTCAC	7443	False	NA	-28	True	AATAAA	-17	NA	55304460	55286753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ES.18129.39	chr19	-	2120	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.545439041842	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAAATTATAGTTTTC	7468	False	NA	-30	True	AATAAA	-15	NA	55304435	55286755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55287321_55290973_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298332_55300056_55300217_55301627_55301713_55302732_55303205_55304227
ES.18129.4	chr19	-	7312	2	Genic_Genomic	ENSMUSG00000024982.11	novel	2647	18	NA	NA	7470	-7892	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCCCCCACTGCTTGCT	NA	False	NA	NA	False	GATAAA	-23	NA	55284051	55275897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_55276393_55277234
ES.18129.40	chr19	-	6049	11	NNC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	-8	-18	intron_retention	FALSE	canonical	0	0	junction_4	213.154310301246	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATGGATGTTCTGTAA	7431	False	NA	-44	True	AATAAA	-1	NA	55304472	55286769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55293985_55294227_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.41	chr19	-	3232	11	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	1	-24	intron_retention	FALSE	canonical	0	0	junction_8	165.293073055104	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGGTCAATGGATGTT	7442	False	NA	-50	True	TATAAA	-45	NA	55304461	55286775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55301327_55301620_55301713_55302732_55303205_55304227
ES.18129.42	chr19	-	4867	10	NNC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	3	-468	intron_retention	FALSE	canonical	0	0	junction_8	172.367179139314	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	7448	False	NA	NA	False	NA	NA	NA	55304455	55287687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301707_55302732_55303205_55304227
ES.18129.43	chr19	-	4187	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	-37	-1547	1	-468	multi-exon	FALSE	canonical	0	0	junction_1	163.592298107215	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	7446	False	NA	NA	False	NA	NA	NA	55304457	55287687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55290302_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.44	chr19	-	5657	9	NIC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	4	-468	intron_retention	FALSE	canonical	3	443	junction_7	59.6394112563161	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	7449	False	NA	NA	False	NA	NA	NA	55304454	55287687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.45	chr19	-	5133	10	NNC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	2	-489	intron_retention	FALSE	canonical	2	4	junction_9	171.051937820356	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7463	False	NA	NA	False	NA	NA	NA	55304440	55287708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303931
ES.18129.46	chr19	-	3354	10	ISM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	6	2477	0	25	5prime_fragment	FALSE	canonical	3	431	junction_5	62.5064934898372	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGTGGAAAGAAAGGAAG	7445	False	NA	NA	False	NA	NA	NA	55304458	55289209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.47	chr19	-	9322	7	NIC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	3	25	intron_retention	FALSE	canonical	3	443	junction_5	58.0794475027287	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGTGGAAAGAAAGGAAG	7448	False	NA	NA	False	NA	NA	NA	55304455	55289209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55291037_55291122_55292171_55292841_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.48	chr19	-	5485	4	ISM	ENSMUSG00000024982.11	ENSMUST00000223807.2	3457	11	8147	-25	-3430	25	3prime_fragment	FALSE	canonical	3	586	junction_1	3.74165738677394	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGTGGAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	55296311	55289209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841
ES.18129.49	chr19	-	3484	10	ISM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	-10	2458	-8	25	5prime_fragment	FALSE	canonical	3	26	junction_9	164.624226049719	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGTGGAAAGAAAGGAAG	7431	False	NA	NA	False	NA	NA	NA	55304472	55289209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ES.18129.5	chr19	-	2025	12	ISM	ENSMUSG00000024982.11	ENSMUST00000226103.2	3357	15	19	9918	14	7420	5prime_fragment	FALSE	canonical	2	3	junction_1	200.867334204477	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATAGTAGGAAATG	7497	False	NA	NA	False	NA	NA	NA	55304406	55277923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55278117_55287126_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ES.18129.50	chr19	-	7958	3	FSM	ENSMUSG00000024982.11	ENSMUST00000223625.2	1420	3	-200	-6338	-43	-1669	multi-exon	FALSE	canonical	3	443	junction_2	8.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCTTTAACTACCTCT	8909	False	NA	NA	False	TATAAA	-40	NA	55302994	55292612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55300217_55301620_55301713_55302732
ES.18129.51	chr19	-	6687	5	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	-2	-1669	intron_retention	FALSE	canonical	3	443	junction_3	26.1772802254168	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCTTTAACTACCTCT	7437	False	NA	NA	False	TATAAA	-40	NA	55304466	55292612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.52	chr19	-	11804	1	FSM	ENSMUSG00000024982.11	ENSMUST00000224474.2	646	1	-1486	-9672	5	-1690	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7466	False	NA	NA	False	TATAAA	-19	NA	55304437	55292633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55292600_55304400
ES.18129.53	chr19	-	9777	3	NIC	ENSMUSG00000024982.11	novel	3457	11	NA	NA	2	-1693	intron_retention	FALSE	canonical	3	443	junction_1	19.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	7447	False	NA	NA	False	TATAAA	-16	NA	55304456	55292636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55301713_55302732_55303205_55304227
ES.18129.54	chr19	-	1523	7	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	-17	3402	5	-1693	5prime_fragment	FALSE	canonical	3	431	junction_2	26.7296132074937	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	7466	False	NA	NA	False	TATAAA	-16	NA	55304437	55292636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.55	chr19	-	2173	1	FSM	ENSMUSG00000024982.11	ENSMUST00000224474.2	646	1	-1506	-21	1	21	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGTGGGGGGGAGCAA	7446	False	NA	NA	False	NA	NA	NA	55304457	55302284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_55302300_55304500
ES.18129.56	chr19	-	1128	2	ISM	ENSMUSG00000024982.11	ENSMUST00000223807.2	3457	11	2	13071	2	0	5prime_fragment	FALSE	canonical	3	482	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7447	False	NA	NA	False	AAAACA	-33	NA	55304456	55302305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55303205_55304227
ES.18129.6	chr19	-	1683	11	ISM	ENSMUSG00000024982.11	ENSMUST00000225963.2	2647	18	5	18264	5	7357	5prime_fragment	FALSE	canonical	3	11	junction_1	160.521182402822	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGCCTTGGTCAT	7466	False	NA	NA	False	NA	NA	NA	55304437	55277986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_55278117_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.7	chr19	-	1876	12	NIC	ENSMUSG00000024982.11	novel	3357	15	NA	NA	2	7353	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	156.803767453475	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATATGTGTTGCCTTGG	7463	False	NA	NA	False	NA	NA	NA	55304440	55277990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_55278117_55287126_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ES.18129.8	chr19	-	3129	1	Antisense	novelGene_ENSMUSG00000024981.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55284051	55280922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55280900_55284100
ES.18129.9	chr19	-	4117	1	Genic_Genomic	ENSMUSG00000024982.11	novel	NA	NA	NA	NA	5325	3264	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCCTTGTGCCAACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	55286196	55282079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_55282100_55286200
ES.1813.1	chr1	+	2544	1	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTATTGCAAATGACCTG	8924	False	NA	NA	False	NA	NA	NA	167098042	167100586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167098000_167100600
ES.1813.2	chr1	+	2038	2	Antisense	novelGene_ENSMUSG00000026558.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACCTGCCTCTGCCTCC	NA	False	NA	NA	False	NA	NA	NA	167100399	167107576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_167102157_167107295
ES.18130.1	chr19	+	4454	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	-236	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTGTTTATCGCTTT	NA	False	NA	12	True	ATTAAA	-16	NA	55304490	55615739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
ES.18130.10	chr19	+	992	2	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	-14086	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACAGTGGTTTTCTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	55304726	55306984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55306242
ES.18130.11	chr19	+	2802	6	NIC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	1417	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.5042855124657	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGAACTCAGAACTGTG	NA	False	NA	NA	False	AATAAA	-24	NA	55304726	55436828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55434609
ES.18130.12	chr19	+	1205	6	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	2	30786	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	45.1105309212827	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGCATTGTATTTTCT	NA	False	NA	NA	False	AATATA	-22	NA	55304728	55403147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55402523
ES.18130.13	chr19	+	4226	9	NNC	ENSMUSG00000024983.11	novel	4175	9	NA	NA	4	15672	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.4799946638203	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCCTTAAAGCAGTAATA	NA	False	NA	NA	False	NA	NA	NA	55304730	55631413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248_55615735_55631385
ES.18130.14	chr19	+	3425	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	4	-43	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCAGAATCAAAAGCAAT	NA	False	NA	2	True	AATAAA	-15	NA	55304730	55614950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
ES.18130.15	chr19	+	2470	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-51	986	5	-986	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGATGGCGTGGGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55304731	55614007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.16	chr19	+	1290	9	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	47.4394350725217	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGGCCCCTTTCTACTG	NA	False	NA	NA	False	ATTAAA	-14	NA	55304754	55565433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564706_55564781_55564905
ES.18130.17	chr19	+	2857	8	FSM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	28	-1641	-4	1641	multi-exon	FALSE	canonical	1	2	junction_7	38.5687829780532	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTATCAATCTTTCTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	55304754	55567074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ES.18130.18	chr19	+	3170	3	ISM	ENSMUSG00000024983.11	ENSMUST00000225051.2	2919	4	-32	1402	-2	-1402	intron_retention	FALSE	canonical	3	111	junction_2	1.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGAATCGGGAACTG	NA	False	NA	NA	False	NA	NA	NA	55304756	55319668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55304977_55310370_55310430_55316777
ES.18130.19	chr19	+	2560	7	NIC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	3	-804	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	41.5398068791317	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCGTGCTGATGCTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	55304761	55614189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55612248
ES.18130.2	chr19	+	4386	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-233	-748	-177	0	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	NA	False	NA	14	True	ATTAAA	-18	NA	55304549	55615741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.20	chr19	+	2533	10	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	3	1148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.0584959803204	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTCCGTCTGGAGCC	NA	False	NA	NA	False	AATAAA	-34	NA	55304761	55566581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310434_55310769_55310868_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564706_55564781_55564905
ES.18130.21	chr19	+	4198	9	NNC	ENSMUSG00000024983.11	novel	4175	9	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.8611272328599	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATTTGTTTATCGCTT	NA	False	NA	11	True	ATTAAA	-15	NA	55304775	55615738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55576735_55576777_55612248
ES.18130.22	chr19	+	2606	8	NNC	ENSMUSG00000024983.11	novel	4175	9	NA	NA	0	-811	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCAGTCTGCCGTGCTG	NA	False	NA	NA	False	ATTAAA	-13	NA	55304781	55614182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
ES.18130.23	chr19	+	157	1	Intergenic	novelGene_15047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	55344451	55344608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55344500_55344600
ES.18130.24	chr19	+	3869	5	ISM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	64509	-746	-154	-2	3prime_fragment	FALSE	canonical	3	70	junction_4	20.712315177208	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTGTTTATCGCTTT	NA	False	NA	12	True	ATTAAA	-16	NA	55369291	55615739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.25	chr19	+	3411	1	Intergenic	novelGene_15048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCTGCCCTTAATGGA	NA	False	NA	NA	False	NA	NA	NA	55446272	55449683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55446300_55449700
ES.18130.26	chr19	+	6641	1	Intergenic	novelGene_15050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAACAAAAC	NA	False	NA	NA	False	TATAAA	-9	NA	55490507	55497148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55490500_55497100
ES.18130.27	chr19	+	5100	1	Intergenic	novelGene_15051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGACCTGGCATGTGA	NA	False	NA	NA	False	NA	NA	NA	55492184	55497284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55492200_55497300
ES.18130.28	chr19	+	582	1	Intergenic	novelGene_15053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACTTAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55604970	55605552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55605000_55605600
ES.18130.3	chr19	+	3617	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-213	1	-157	-1	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAGTTTTAAATGTTCC	NA	False	NA	44	True	ATTAAA	-14	NA	55304569	55614992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.4	chr19	+	1006	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-82	2481	-26	-2481	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTGGGTTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	55304700	55612512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.5	chr19	+	2670	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	-70	805	-14	-805	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCGTGCTGATGCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	55304712	55614188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.6	chr19	+	886	8	NNC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	-14	-2600	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	37.8940520883353	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAAATGGTCACATGA	NA	False	NA	NA	False	GATAAA	-29	NA	55304712	55612393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487748_55612248
ES.18130.7	chr19	+	1359	6	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	-14	30909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.5042855124657	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAATGTTTCTTAGCT	NA	False	NA	NA	False	TTTAAA	-24	NA	55304712	55403270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380316_55402523
ES.18130.8	chr19	+	2595	7	NIC	ENSMUSG00000024983.11	novel	3405	8	NA	NA	-2	-809	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	39.9099681227078	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTGCCGTGCTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	55304724	55614184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55304977_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ES.18130.9	chr19	+	3121	8	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	-2	17161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.6849288844856	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGATGGATGCATCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	55304724	55389522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55304977_55310370_55310430_55316777_55316889_55329145_55329312_55330293_55330416_55369373_55369452_55380215_55380301_55387274
ES.18131.1	chr19	-	3586	1	Intergenic	novelGene_15049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCTTTCTCTAAGCATC	NA	False	NA	NA	False	NA	NA	NA	55453233	55449647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_55449600_55453200
ES.18132.1	chr19	-	177	1	Intergenic	novelGene_15052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACAGATAAAGGC	NA	False	NA	NA	False	NA	NA	NA	55545932	55545755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_55545800_55545900
ES.18133.1	chr19	+	177	1	Intergenic	novelGene_15054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTCATATAT	NA	False	NA	NA	False	NA	NA	NA	55713101	55713278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_55713100_55713300
ES.18134.1	chr19	+	4389	14	NNC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.4216384571398	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730029	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55878075_55878178_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18134.10	chr19	+	4082	13	NIC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	26.9602330603181	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730239	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.11	chr19	+	3750	14	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	27.3960650221565	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55730239	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55915115_55915189_55919865
ES.18134.12	chr19	+	3602	13	FSM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	-438	29	11	-5	multi-exon	FALSE	canonical	2	5	junction_12	25.9758167447254	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55730262	55921656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ES.18134.13	chr19	+	4036	13	FSM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	-437	-406	12	5	multi-exon	FALSE	canonical	2	5	junction_12	25.9758167447254	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730263	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ES.18134.14	chr19	+	3653	13	NIC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	26.9602330603181	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55730263	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.15	chr19	+	4103	14	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	27.4446187911531	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAAGGCTGGCCGCTTGC	NA	False	NA	16	True	AATAAA	-17	NA	55730263	55922085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55915115_55915189_55919865
ES.18134.16	chr19	+	4182	15	NIC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	2	10	junction_13	28.0025509042097	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730263	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55915115_55915189_55919865
ES.18134.17	chr19	+	3105	13	NIC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	26.9602330603181	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTTCCTTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	55730270	55921145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.18	chr19	+	4046	13	NNC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.1849823799193	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730270	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55730963_55731207_55731275_55731502_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ES.18134.19	chr19	+	3212	5	NIC	ENSMUSG00000024985.21	novel	3590	12	NA	NA	19	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	38.5421846812035	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730270	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55919865
ES.18134.2	chr19	+	4238	15	NIC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	36.3483711001284	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730201	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ES.18134.20	chr19	+	3915	12	FSM	ENSMUSG00000024985.21	ENSMUST00000111659.9	2324	12	-144	-1447	30	2	multi-exon	FALSE	canonical	3	8	junction_7	25.077400843346	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTGGCCGCTTGCTTC	NA	False	NA	19	True	AATAAA	-20	NA	55730345	55922088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.21	chr19	+	3649	13	NNC	ENSMUSG00000024985.21	novel	2324	12	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	34.3596177704778	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55730350	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55851852_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.22	chr19	+	3671	13	NNC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.0685030659195	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAAGGCTGGCCGCTTG	NA	False	NA	15	True	AATAAA	-16	NA	55730645	55922084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55891361_55891437_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.23	chr19	+	3201	15	NNC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	70	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2357388180085	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55730843	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55730963_55731207_55731275_55731504_55731634_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55915115_55915189_55919865
ES.18134.24	chr19	+	3679	12	NIC	ENSMUSG00000024985.21	novel	2324	12	NA	NA	200	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.1838148364597	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730973	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55851849_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.25	chr19	+	3568	12	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	218	5	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	31.5288140548052	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730991	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ES.18134.26	chr19	+	3710	13	NNC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	219	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	32.9515637801236	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730992	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55731275_55731504_55731630_55806195_55806298_55851852_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18134.27	chr19	+	3644	13	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	222	5	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	27.9135570407404	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730995	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55915115_55915189_55919865
ES.18134.28	chr19	+	3159	12	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	229	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	27.6605755185341	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55731002	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.29	chr19	+	3480	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	757	-402	235	0	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731008	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.3	chr19	+	4022	12	NIC	ENSMUSG00000024985.21	novel	3590	12	NA	NA	-44	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	22.2725417431976	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAAGGCTGGCCGCTTG	NA	False	NA	15	True	AATAAA	-16	NA	55730207	55922084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.30	chr19	+	3541	12	NIC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	247	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	27.6605755185341	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731020	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.31	chr19	+	3068	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	769	-2	247	1	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55731020	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.32	chr19	+	3167	13	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	248	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	36.0558016598346	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55731021	55921656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.33	chr19	+	3540	12	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	248	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_10	23.2787634217602	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731021	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18134.34	chr19	+	3241	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	791	-197	-234	196	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTCTTTTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	55731042	55921881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.35	chr19	+	3119	12	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-234	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_10	23.2787634217602	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55731042	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18134.36	chr19	+	3572	12	NNC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	-231	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	33.6211267700721	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731045	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55731275_55731504_55731630_55806195_55806298_55851852_55851994_55896854_55896988_55899010_55899102_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.37	chr19	+	3374	11	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-224	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.3202809693655	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTGGCCGCTTGCTTC	NA	False	NA	19	True	AATAAA	-20	NA	55731052	55922088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18134.38	chr19	+	3573	12	NIC	ENSMUSG00000024985.21	novel	3629	15	NA	NA	-217	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	31.9511507313563	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731059	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55851849_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.39	chr19	+	3150	13	ISM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	289	-1059	-214	1	3prime_fragment	FALSE	canonical	2	9	junction_12	28.4266844512139	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55731062	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ES.18134.4	chr19	+	3636	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	-44	-2	-44	1	multi-exon	FALSE	canonical	3	39	junction_11	15.7312133791442	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55730207	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.40	chr19	+	3444	11	ISM	ENSMUSG00000024985.21	ENSMUST00000111659.9	2324	12	575	-1450	-212	5	3prime_fragment	FALSE	canonical	3	8	junction_6	25.8149181676022	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55731064	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.41	chr19	+	3628	14	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	-211	5	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	32.5538243420023	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55731065	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55915115_55915189_55919865
ES.18134.42	chr19	+	5189	13	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-81	1	intron_retention	FALSE	canonical	2	5	junction_2	31.7170651577699	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	55731195	55921686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55915189_55919865
ES.18134.43	chr19	+	3317	10	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	1148	-400	123	-2	3prime_fragment	FALSE	canonical	3	39	junction_9	14.3947864361792	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAAGGCTGGCCGCTTG	NA	False	NA	15	True	AATAAA	-16	NA	55731399	55922084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.44	chr19	+	3390	11	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	123	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	26.6910097223766	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAAGGCTGGCCGCTTG	NA	False	NA	15	True	AATAAA	-16	NA	55731399	55922084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.45	chr19	+	3267	11	ISM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	802	-401	226	0	3prime_fragment	FALSE	canonical	2	5	junction_10	25.6454674357868	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55731502	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ES.18134.46	chr19	+	3272	10	NNC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	-64657	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9468056926644	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAAAGGCTGGCCGCTT	NA	False	NA	14	True	AATAAA	-15	NA	55817126	55922083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_55817327_55896854_55896988_55899010_55899114_55900990_55901078_55905770_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55919865
ES.18134.47	chr19	+	7698	2	ISM	ENSMUSG00000024985.21	ENSMUST00000148666.3	1044	7	17828	-5635	17828	0	intron_retention	FALSE	canonical	3	68	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAAAG	5607	False	NA	NA	False	AATGAA	-9	NA	55904568	55913671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_55905912_55907316
ES.18134.5	chr19	+	4173	14	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-30	5	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	27.3960650221565	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730221	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55914408_55914482_55915115_55915189_55919865
ES.18134.6	chr19	+	4143	14	FSM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	-549	-1459	-27	0	multi-exon	FALSE	canonical	2	9	junction_13	27.9013477649484	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730224	55922086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ES.18134.7	chr19	+	4130	14	NIC	ENSMUSG00000024985.21	novel	2135	14	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	30.2541502850015	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAAGGCTGGCCGCTTGC	NA	False	NA	16	True	AATAAA	-17	NA	55730224	55922085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899102_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ES.18134.8	chr19	+	4018	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	-21	-407	-21	5	multi-exon	FALSE	canonical	3	39	junction_11	15.7312133791442	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	False	NA	22	True	AATAAA	-23	NA	55730230	55922091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ES.18134.9	chr19	+	4081	13	NIC	ENSMUSG00000024985.21	novel	2318	15	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	22.7173147376377	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCTGGCCGCTTGCTT	NA	False	NA	18	True	AATAAA	-19	NA	55730236	55922087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
ES.18135.1	chr19	-	1616	13	Antisense	novelGene_ENSMUSG00000099746.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCGAGTCCCCCCCAA	NA	False	NA	NA	False	AAAAAG	-29	NA	55920077	55730691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55730961_55731205_55731273_55731502_55731630_55806195_55806296_55896852_55896986_55899008_55899114_55900990_55901074_55905781_55905912_55907316_55907475_55907940_55908051_55912327_55912375_55915113_55915187_55919863
ES.18135.3	chr19	-	3196	16	Antisense	novelGene_ENSMUSG00000099746.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCGAGTCCCCCCCAA	NA	False	NA	NA	False	AAAAAG	-29	NA	55921391	55730691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55730961_55731205_55731273_55731502_55731630_55743443_55743513_55806193_55806298_55851849_55851992_55896852_55896986_55899008_55899114_55900990_55901074_55905781_55905912_55907316_55907475_55907940_55908051_55912327_55912376_55912960_55913010_55914405_55914480_55919863
ES.18135.5	chr19	-	1784	13	Antisense	novelGene_ENSMUSG00000099746.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-12	NA	55920291	55730727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55730961_55731205_55731271_55731502_55731630_55806195_55806296_55896852_55896986_55899008_55899114_55900990_55901074_55905782_55905912_55907316_55907475_55907940_55908052_55912331_55912376_55914407_55914476_55919863
ES.18135.6	chr19	-	1779	13	Antisense	novelGene_ENSMUSG00000099746.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-12	NA	55920297	55730727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55730961_55731205_55731273_55731502_55731630_55806195_55806298_55896852_55896986_55899008_55899114_55900990_55901074_55905781_55905912_55907316_55907475_55907940_55908051_55912327_55912376_55912960_55913016_55919869
ES.18135.7	chr19	-	1327	1	Antisense	novelGene_ENSMUSG00000024985.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55743465	55742138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_55742100_55743500
ES.18136.1	chr19	-	5111	38	ISM	ENSMUSG00000049134.16	ENSMUST00000040711.15	5334	41	3819	-57	3661	-3	3prime_fragment	TRUE	canonical	0	0	junction_3	0.368599505323942	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAGAGCTTGTGGTTT	4483	False	NA	NA	False	ATTAAA	-18	NA	56374648	56308475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457_56323770_56324474_56324583_56324913_56325019_56326468_56326568_56328950_56329056_56330570_56330769_56332443_56332558_56333092_56333201_56333891_56333997_56335560_56335660_56338720_56338826_56339863_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352460_56352733_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416
ES.18137.1	chr19	+	2349	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	-2	3	-2	-3	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTGACTGGTCCGGT	NA	False	NA	11	True	AATAAA	-44	NA	56385558	56430773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
ES.18137.2	chr19	+	468	1	FSM	ENSMUSG00000025076.13	ENSMUST00000235178.3	1341	1	903	-30	885	30	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	56386594	56387062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56386600_56387100
ES.18137.3	chr19	+	7213	1	Genic_Genomic	ENSMUSG00000025076.13	novel	NA	NA	NA	NA	9375	5144	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAACCACATGAT	NA	False	NA	NA	False	NA	NA	NA	56395084	56402297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_56395100_56402300
ES.18138.1	chr19	-	175	1	Intergenic	novelGene_15055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAAAGGGTTTG	1523	False	NA	NA	False	NA	NA	NA	56388512	56388337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_56388300_56388500
ES.18139.1	chr19	-	177	1	Intergenic	novelGene_15056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	56394246	56394069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_56394100_56394200
ES.1814.1	chr1	+	1388	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAACCAACAAC	NA	False	NA	NA	False	NA	NA	NA	167109456	167110844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167109500_167110800
ES.18140.1	chr19	+	7729	3	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTCTCCTCCGAG	NA	False	NA	NA	False	NA	NA	NA	56526850	56536587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_56526877_56528615_56536139_56536407
ES.18140.2	chr19	+	3302	7	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCTCCTCCGAGGGT	NA	False	NA	NA	False	NA	NA	NA	56526850	56536590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_56526877_56528615_56528755_56529936_56530056_56531064_56531198_56532445_56534079_56535068_56536135_56536404
ES.18140.3	chr19	+	1669	2	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56534619	56536558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_56536135_56536404
ES.18140.4	chr19	+	1127	1	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTCCTCCGAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	56535465	56536592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_56535500_56536600
ES.18140.6	chr19	+	840	2	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTCTCCTCCGAG	NA	False	NA	NA	False	NA	NA	NA	56535469	56536587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_56536143_56536420
ES.18141.1	chr19	+	2746	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	-5	5850	-5	-5850	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAATTTCTTCATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	56536687	56586085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.10	chr19	+	7480	5	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	197	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.3732142452201	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTGTCTTGAAT	NA	False	NA	17	True	ATTAAA	-17	NA	56536889	56591935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56583231_56583452_56585687
ES.18141.11	chr19	+	3439	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	198	4954	198	-4954	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTAAGAAACAGCACTGGA	NA	False	NA	NA	False	NA	NA	NA	56536890	56586981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.12	chr19	+	3609	10	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	202	7016	202	4843	5prime_fragment	FALSE	canonical	3	84	junction_1	13.0875494504236	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGTTGTCTTGCCTGG	NA	False	NA	NA	False	AATAAA	-19	NA	56536894	56584919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231
ES.18141.13	chr19	+	2491	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	206	-5860	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	27.6783308745307	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATTCTAAACAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	56536898	56586075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580858_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.14	chr19	+	8387	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	213	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.7212862286509	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGTGTTTCTGTCTTG	NA	False	NA	14	True	ATTAAA	-14	NA	56536905	56591932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56579995_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.15	chr19	+	2508	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	213	-5864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.7742033731768	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATTTTAATTCTAAACA	NA	False	NA	NA	False	AATAAA	-15	NA	56536905	56586071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576607_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.16	chr19	+	2424	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	214	-5860	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	35.0829018184072	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATTCTAAACAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	56536906	56586075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580858_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.17	chr19	+	2456	11	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	216	-5860	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	27.9399355761605	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATTCTAAACAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	56536908	56586075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.18	chr19	+	3589	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	243	4759	243	-4759	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTACCTATTTATTAGT	NA	False	NA	NA	False	TATAAA	-20	NA	56536935	56587176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.19	chr19	+	8294	12	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.3009696269043	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTGTCTTGAAT	NA	False	NA	17	True	ATTAAA	-17	NA	56536935	56591935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687_56588125_56588178
ES.18141.2	chr19	+	8590	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	2	-1	2	1	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTCTGTCTTGAATA	NA	False	NA	18	True	ATTAAA	-18	NA	56536694	56591936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.20	chr19	+	3357	10	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	265	-5868	intron_retention	FALSE	canonical	3	9	junction_7	28.8212884282897	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGTATTTTAATTCTA	NA	False	NA	NA	False	AATAAA	-11	NA	56536957	56586067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580858_56580948_56582091_56583452_56585687
ES.18141.21	chr19	+	2001	10	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	279	-5855	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	32.9110285841864	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTAAACAAATTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	56536971	56586080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.22	chr19	+	3168	10	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	308	-4659	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	32.9110285841864	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTGCTGACTTCCG	NA	False	NA	NA	False	ACTAAA	-20	NA	56537000	56587276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.23	chr19	+	8178	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	320	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	35.0829018184072	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTGTCTTGAAT	NA	False	NA	17	True	ATTAAA	-17	NA	56537012	56591935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580858_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.24	chr19	+	3487	11	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	324	-4683	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	41.7910277451991	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	56537016	56587252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564590_56564717_56576601_56576702_56580007_56580240_56580858_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.25	chr19	+	3919	9	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	335	-5855	intron_retention	FALSE	canonical	3	84	junction_1	11.3736262906779	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTAAACAAATTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	56537027	56586080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580948_56582091_56583452_56585687
ES.18141.28	chr19	+	2620	11	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	548	-5364	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	27.9399355761605	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTACCTTTAACTGTAT	NA	False	NA	NA	False	TATAAA	-32	NA	56537240	56586571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.29	chr19	+	7579	9	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	-274	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.4488371956308	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGTGTTTCTGTCTTG	NA	False	NA	14	True	ATTAAA	-14	NA	56558954	56591932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56559304_56563248_56563312_56564590_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582213_56583231_56583452_56585687
ES.18141.3	chr19	+	3925	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	13	4653	13	-4653	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGACTTCCGTTATTA	NA	False	NA	NA	False	ACTAAA	-26	NA	56536705	56587282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.30	chr19	+	2688	9	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	29	-4681	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	31.1445721595273	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCTGA	NA	False	NA	NA	False	NA	NA	NA	56559257	56587254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.31	chr19	+	4421	1	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	1273	-15154	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAATAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	56560501	56564922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56560500_56564900
ES.18141.32	chr19	+	5001	9	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	3959	-2329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	35.4909759657297	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGACTTCTCATAGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	56563187	56589606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687_56588125_56588178
ES.18141.33	chr19	+	2281	6	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	39907	4851	17371	-4851	3prime_fragment	FALSE	canonical	3	94	junction_1	11.3243101335137	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACTGAGTGGACATGT	NA	False	NA	NA	False	NA	NA	NA	56576599	56587084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.34	chr19	+	2463	6	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	17858	-4681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.8133908558591	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCTGA	NA	False	NA	NA	False	NA	NA	NA	56577086	56587254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56577201_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.35	chr19	+	1234	6	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	17908	-5860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.8133908558591	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAATTCTAAACAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	56577136	56586075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56577201_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.36	chr19	+	3111	3	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	20361	-5855	intron_retention	FALSE	canonical	3	99	junction_2	11.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTAAACAAATTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	56579589	56586080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56580948_56582091_56583452_56585687
ES.18141.37	chr19	+	6497	2	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	26156	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTGTCTTGAAT	2529	False	NA	17	True	ATTAAA	-17	NA	56585384	56591935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56588125_56588178
ES.18141.4	chr19	+	2770	12	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	31	-5858	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	43.4625325485894	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCTAAACAAATTTC	NA	False	NA	NA	False	AATAAA	-21	NA	56536723	56586077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56577725_56577853_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.5	chr19	+	2806	5	ISM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	108	25766	108	-13907	5prime_fragment	FALSE	canonical	3	84	junction_1	1.87082869338697	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56536800	56566169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586
ES.18141.6	chr19	+	6021	12	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	190	-2326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.3009696269043	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTCTCATAGATTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	56536882	56589609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687_56588125_56588178
ES.18141.7	chr19	+	1445	5	NNC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	196	-15105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5699347883384	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATCTAATTCTTTAATT	NA	False	NA	NA	False	NA	NA	NA	56536888	56564971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56537293_56540190_56540344_56558847_56559288_56563248_56563312_56564586
ES.18141.8	chr19	+	8330	11	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	196	-6	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	27.9399355761605	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAAGTTGTGTTTCTGTC	NA	False	NA	11	True	ATTAAA	-11	NA	56536888	56591929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ES.18141.9	chr19	+	2658	5	NIC	ENSMUSG00000025078.10	novel	8591	11	NA	NA	197	-13907	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	31.5158690186388	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56536889	56566169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_56537293_56540190_56540344_56558847_56559304_56563248_56563312_56564586
ES.18142.1	chr19	-	4661	11	NNC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	-15	1340	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69.6235592310534	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATTAAAAACA	7959	False	NA	NA	False	NA	NA	NA	56536690	56516258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56517093_56517866_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536627
ES.18142.10	chr19	-	6514	8	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	25	0	intron_retention	FALSE	canonical	3	162	junction_6	34.6015217313119	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	8190	False	NA	-10	True	AATAAA	-18	NA	56536459	56517600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56530056_56531064_56534079_56535068_56536136_56536405
ES.18142.12	chr19	-	4032	10	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	45	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	64.7782542387661	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGCATATTTGGATGG	8210	False	NA	-11	True	AATAAA	-17	NA	56536439	56517601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528724_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.13	chr19	-	4077	10	NNC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	84.7676563056662	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAGCATATTTGGATG	8189	False	NA	-12	True	AATAAA	-16	NA	56536460	56517602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526900_56528613_56528724_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.14	chr19	-	4241	10	NIC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	-187	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	69.1327225945379	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAGCATATTTGGATG	7787	False	NA	-12	True	AATAAA	-16	NA	56536862	56517602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528724_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ES.18142.15	chr19	-	6515	1	NIC	ENSMUSG00000025077.15	novel	4156	10	NA	NA	1697	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAGCATATTTGGATG	NA	False	NA	-12	True	AATAAA	-16	NA	56524117	56517602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56517600_56524100
ES.18142.16	chr19	-	4517	9	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	32	-3	intron_retention	FALSE	canonical	3	8	junction_7	70.8603379895975	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGAGCATATTTGGAT	8197	False	NA	-13	True	AATAAA	-15	NA	56536452	56517603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56530056_56531064_56531199_56532446_56533340_56535068_56536136_56536405
ES.18142.17	chr19	-	3207	9	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	88.7699801453171	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGAGCATATTTGGAT	8179	False	NA	-13	True	AATAAA	-15	NA	56536470	56517603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56533340_56535068_56536136_56536405
ES.18142.18	chr19	-	4328	10	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.202888750065	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAGAGCATATTTGGAT	8185	False	NA	-13	True	AATAAA	-15	NA	56536464	56517603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56520254_56520674_56525559_56525715_56528613_56528724_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.19	chr19	-	7511	7	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	14	-4	intron_retention	FALSE	canonical	3	173	junction_5	33.6551135292494	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACCAGAGCATATTTGGA	8179	False	NA	-14	True	AATAAA	-14	NA	56536470	56517604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56530056_56531064_56536136_56536405
ES.18142.2	chr19	-	4302	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-183	-10	8	8	multi-exon	FALSE	canonical	3	154	junction_5	33.6088612653799	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGGGTTTCATTATT	7982	False	NA	0	True	AATAAA	-28	NA	56536667	56517590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.20	chr19	-	4236	8	ISM	ENSMUSG00000025077.15	ENSMUST00000182059.3	4109	10	-183	7379	8	3463	5prime_fragment	FALSE	canonical	3	154	junction_3	37.7353837091061	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAGAAAATGTGATTTT	7982	False	NA	NA	False	AATAAA	-16	NA	56536667	56524979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.21	chr19	-	5080	4	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	42	-651	intron_retention	FALSE	canonical	3	162	junction_2	51.3441547035514	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTCCAGCCTTGCTG	8207	False	NA	NA	False	AATATA	-31	NA	56536442	56529093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56530056_56531064_56534079_56535068_56536136_56536405
ES.18142.22	chr19	-	1831	3	ISM	ENSMUSG00000025077.15	ENSMUST00000182058.8	4664	8	2392	11507	2392	-665	internal_fragment	FALSE	canonical	3	173	junction_1	7.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGTTGGT	1977	False	NA	NA	False	AATATA	-17	NA	56533195	56529107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_56530056_56531064_56531199_56532446
ES.18142.23	chr19	-	7075	2	NIC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	9	-666	intron_retention	FALSE	canonical	3	30	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAAGTTGG	7983	False	NA	NA	False	AATATA	-16	NA	56536666	56529108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56536136_56536618
ES.18142.3	chr19	-	4793	10	NNC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	-707	6	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	51.9973883484712	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGATGGGTTTCATTA	7267	False	NA	-2	True	AATAAA	-26	NA	56537382	56517592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536627
ES.18142.5	chr19	-	5278	9	NIC	ENSMUSG00000025077.15	novel	4087	10	NA	NA	-6	1	intron_retention	FALSE	canonical	3	30	junction_8	53.4011938068804	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATTTGGATGGGTTT	7968	False	NA	-7	True	AATAAA	-21	NA	56536681	56517597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ES.18142.6	chr19	-	4115	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182276.3	4087	10	-25	-3	-25	1	multi-exon	FALSE	canonical	3	30	junction_9	50.5063252364383	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATTTGGATGGGTTT	7949	False	NA	-7	True	AATAAA	-21	NA	56536700	56517597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ES.18142.7	chr19	-	5591	10	NNC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	-786	1	intron_retention	FALSE	canonical	0	0	junction_9	69.246919082867	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATTTGGATGGGTTT	7188	False	NA	-7	True	AATAAA	-21	NA	56537461	56517597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536405_56536552_56537231
ES.18142.8	chr19	-	4122	10	NNC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	69.3046593128423	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATATTTGGATGGGTTT	8179	False	NA	-7	True	AATAAA	-21	NA	56536470	56517597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530080_56531064_56531199_56532446_56534079_56535068_56536136_56536405
ES.18142.9	chr19	-	5300	9	NIC	ENSMUSG00000025077.15	novel	4109	10	NA	NA	26	0	intron_retention	FALSE	canonical	3	16	junction_5	68.5911801910421	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	8191	False	NA	-10	True	AATAAA	-18	NA	56536458	56517600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528724_56529936_56530056_56531064_56534079_56535068_56536136_56536405
ES.18143.1	chr19	-	2745	1	Antisense	novelGene_ENSMUSG00000025078.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGAGAGGGTGTGGGA	NA	False	NA	NA	False	NA	NA	NA	56586979	56584234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_56584200_56587000
ES.18144.1	chr19	-	2584	1	Antisense	novelGene_ENSMUSG00000025078.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGCCCATGTCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	56591327	56588743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_56588700_56591300
ES.18145.1	chr19	-	3922	2	Antisense	novelGene_ENSMUSG00000117859.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTTCAAATTCACCC	7903	False	NA	NA	False	NA	NA	NA	56658150	56633298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_56637165_56658094
ES.18145.2	chr19	-	4079	1	Intergenic	novelGene_15057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCCCTCTCCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	56644785	56640706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_56640700_56644800
ES.18146.1	chr19	+	1012	4	NNC	ENSMUSG00000117859.2	novel	575	2	NA	NA	894	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTCTCACATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	56658443	56662875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56658478_56660508_56660888_56661098_56661215_56662392
ES.18147.1	chr19	+	173	1	Intergenic	novelGene_15058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	56682735	56682908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_56682700_56682900
ES.18148.1	chr19	+	217	1	Intergenic	novelGene_15059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTTAAACCATTTATT	NA	False	NA	NA	False	NA	NA	NA	56743092	56743309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_56743100_56743300
ES.18149.1	chr19	-	190	1	Intergenic	novelGene_15060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	56752241	56752051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_56752100_56752200
ES.1815.1	chr1	-	4742	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	False	NA	0	True	AATAAA	-32	NA	167112900	167050451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.10	chr1	-	4354	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	11055	-16	at_least_one_novel_splicesite	FALSE	canonical	2	45	junction_6	361.009541271265	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCAACTCTTCACTCC	NA	False	NA	-16	True	AATAAA	-16	NA	167101115	167050467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167100931
ES.1815.11	chr1	-	4351	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	236	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	377.768631425227	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCAACTCTTCACTCC	NA	False	NA	-16	True	AATAAA	-16	NA	167111934	167050467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167111753
ES.1815.13	chr1	-	4202	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	168	-16	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	375.53402716073	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCAACTCTTCACTCC	NA	False	NA	-16	True	AATAAA	-16	NA	167112002	167050467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167111970
ES.1815.15	chr1	-	4274	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	377.768631425227	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCAACTCTTCACTCC	NA	False	NA	-16	True	AATAAA	-16	NA	167112170	167050467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112066
ES.1815.16	chr1	-	4032	4	NIC	ENSMUSG00000026558.14	novel	1194	6	NA	NA	-175	-38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	474.250519826342	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGACAAATAAAAAC	NA	False	NA	-38	True	NA	NA	NA	167112628	167050489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167057461_167057560_167112344
ES.1815.17	chr1	-	4658	8	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-172	-38	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	457.800598246772	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGACAAATAAAAAC	NA	False	NA	-38	True	NA	NA	NA	167112625	167050489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167107692_167107922_167112344
ES.1815.19	chr1	-	1755	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	144	2832	144	126	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTCTGCGTTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	167112745	167053283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.2	chr1	-	4294	7	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-47	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	377.768631425227	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTTTGTGGGTGCCTGG	NA	False	NA	-1	True	AATAAA	-31	NA	167112217	167050452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112108
ES.1815.20	chr1	-	1485	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	96	3150	96	-192	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTATCCTGTAGGAACC	NA	False	NA	22	True	NA	NA	NA	167112793	167053601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.21	chr1	-	1567	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	192	153	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	363.244025721308	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTGTAACTGTACA	NA	False	NA	-19	True	TATAAA	-38	NA	167111978	167053642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167111406
ES.1815.23	chr1	-	1140	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	11080	139	at_least_one_novel_splicesite	FALSE	canonical	2	45	junction_6	361.009541271265	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGGATCTATTTT	NA	False	NA	-33	True	TATAAA	-24	NA	167101090	167053656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167100931
ES.1815.24	chr1	-	1223	6	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	205	139	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	405.117563183824	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGGATCTATTTT	NA	False	NA	-33	True	TATAAA	-24	NA	167112684	167053656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.25	chr1	-	3058	5	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-778	139	intron_retention	FALSE	canonical	3	994	junction_4	15.2807067899361	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGGATCTATTTT	NA	False	NA	-33	True	TATAAA	-24	NA	167065182	167053656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167057560_167062260_167062404_167064171_167064269_167065057
ES.1815.26	chr1	-	1055	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	10690	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	479.109474847752	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGGATCTATTTT	NA	False	NA	-33	True	TATAAA	-24	NA	167101480	167053656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055344_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167101400
ES.1815.27	chr1	-	1369	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	147	138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	377.768631425227	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAAAGGATCTATTT	NA	False	NA	-34	True	TATAAA	-23	NA	167112742	167053657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112353
ES.1815.28	chr1	-	3095	6	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	197	137	intron_retention	FALSE	canonical	3	994	junction_4	19.0829767070025	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGAAAGGATCTATT	NA	False	NA	-35	True	TATAAA	-22	NA	167112692	167053658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167064269_167065057_167065218_167112344
ES.1815.29	chr1	-	1462	10	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-24	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	503.486682550962	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAAAAGAAAGGATCTA	NA	False	NA	-37	True	TATAAA	-20	NA	167112194	167053660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167110927_167111050_167111146_167111264_167111406_167111525_167112066
ES.1815.3	chr1	-	4607	9	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	490.558466826331	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCTTTGTGGGTGCCT	NA	False	NA	-3	True	AATAAA	-29	NA	167112297	167050454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167111146_167111264_167111406_167111525_167112108
ES.1815.30	chr1	-	1162	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	261	3308	-175	36	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGAGCTTAAGTGACAA	NA	False	NA	38	True	NA	NA	NA	167112628	167053759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.31	chr1	-	171	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAAAAAGGGGTG	NA	False	NA	NA	False	NA	NA	NA	167105591	167105420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167105400_167105600
ES.1815.4	chr1	-	4494	6	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	136	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	405.117563183824	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCTTTGTGGGTGCCT	NA	False	NA	-3	True	AATAAA	-29	NA	167112753	167050454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_167054091_167055300_167055350_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.5	chr1	-	4449	8	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	217	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	356.599357880544	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCACTCCTTTGTGGGT	NA	False	NA	-7	True	AATAAA	-25	NA	167112672	167050458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167051677_167051734_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ES.1815.6	chr1	-	4329	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	5277	-12	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_6	371.06487153716	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTCTTCACTCCTTTG	NA	False	NA	-12	True	AATAAA	-20	NA	167106893	167050463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167106738
ES.1815.7	chr1	-	4766	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	172	-12	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	363.244025721308	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTCTTCACTCCTTTG	NA	False	NA	-12	True	AATAAA	-20	NA	167111998	167050463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167111406
ES.1815.8	chr1	-	4504	8	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	587	-14	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	456.671721507353	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAACTCTTCACTCCTT	NA	False	NA	-14	True	AATAAA	-18	NA	167111583	167050465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167107766_167107922_167111406
ES.1815.9	chr1	-	4470	7	NNC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-182	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	378.453321648346	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCAACTCTTCACTCC	NA	False	NA	-16	True	AATAAA	-16	NA	167112635	167050467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_167054091_167055300_167055350_167057461_167057560_167062251_167062404_167064171_167064269_167065057_167065218_167112344
ES.18150.1	chr19	+	174	1	Intergenic	novelGene_15061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	56780095	56780269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_56780100_56780300
ES.18151.1	chr19	-	8483	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-7	2	intron_retention	TRUE	canonical	3	43	junction_2	9.1554620422511	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTGATGGCGTCTGT	5190	False	NA	1	True	ATTAAA	-24	NA	56810629	56775910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.10	chr19	-	5876	15	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-16	-365	intron_retention	FALSE	canonical	0	0	junction_1	17.1608536489064	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTATTGACTCTACTGAT	5181	False	NA	NA	False	TATAAA	-18	NA	56810638	56776277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779479_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.11	chr19	-	5602	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	6	837	6	-837	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTACGGGTGTCATGGTT	5203	False	NA	NA	False	AATAAA	-16	NA	56810616	56776749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.12	chr19	-	4688	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-2	1759	-2	1291	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTCTGCATTATTTC	5195	False	NA	NA	False	AATAAA	-19	NA	56810624	56777671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.13	chr19	-	6734	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	1291	intron_retention	FALSE	canonical	3	43	junction_2	9.1554620422511	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTCTGCATTATTTC	5178	False	NA	NA	False	AATAAA	-19	NA	56810641	56777671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.14	chr19	-	4620	16	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	1289	intron_retention	FALSE	canonical	2	3	junction_11	16.2693986776812	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAACTCTGCATTATT	5178	False	NA	NA	False	AATAAA	-17	NA	56810641	56777673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.15	chr19	-	4600	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-24	1869	-24	1181	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTCAAAGTTGTTTTAT	5173	False	NA	NA	False	AAAAAG	-24	NA	56810646	56777781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.16	chr19	-	6602	14	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	3	1181	intron_retention	FALSE	canonical	3	43	junction_2	9.1554620422511	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTCAAAGTTGTTTTAT	5200	False	NA	NA	False	AAAAAG	-24	NA	56810619	56777781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.17	chr19	-	3136	1	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	1813	324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGATGTAAACTATGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	56781774	56778638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56778600_56781800
ES.18151.2	chr19	-	6476	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	-30	-1	-30	1	multi-exon	FALSE	canonical	3	40	junction_2	9.58239125804317	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTGATGGCGTCTG	5167	False	NA	0	True	ATTAAA	-23	NA	56810652	56775911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.3	chr19	-	6379	16	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	-2	intron_retention	FALSE	canonical	2	3	junction_11	16.2693986776812	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGTTGATGGCGT	5178	False	NA	-3	True	ATTAAA	-20	NA	56810641	56775914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.4	chr19	-	6238	15	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-16	-3	intron_retention	FALSE	canonical	0	0	junction_1	17.1608536489064	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGTCTGTTGATGGCG	5181	False	NA	-4	True	ATTAAA	-19	NA	56810638	56775915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779479_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.5	chr19	-	6186	15	NNC	ENSMUSG00000035173.15	novel	2754	15	NA	NA	216	-4	intron_retention	FALSE	canonical	0	0	junction_14	17.4865837785686	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGTCTGTTGATGGC	NA	False	NA	-5	True	ATTAAA	-18	NA	56801899	56775916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801256
ES.18151.6	chr19	-	7510	15	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	-6	intron_retention	FALSE	canonical	2	3	junction_10	16.4987630952587	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTTGATG	5178	False	NA	-7	True	ATTAAA	-16	NA	56810641	56775918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779479_56780372_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ES.18151.7	chr19	-	8737	15	NNC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-19	-6	intron_retention	FALSE	non_canonical	0	0	junction_13	17.3047415939289	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTTGATG	5178	False	NA	-7	True	ATTAAA	-16	NA	56810641	56775918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798804_56801426_56802122_56810419
ES.18151.8	chr19	-	7893	13	NNC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-16	-6	intron_retention	FALSE	canonical	0	0	junction_5	23.1780547549233	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTTGATG	5181	False	NA	-7	True	ATTAAA	-16	NA	56810638	56775918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788743_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56810419
ES.18151.9	chr19	-	4246	9	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	-935	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.5745293417161	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAAGTTGTCTGTTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	56790353	56775919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_56779062_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316
ES.18152.1	chr19	+	4888	26	NNC	ENSMUSG00000025081.14	novel	4914	26	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.08369737473153	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGCTTACTGCTG	NA	False	NA	NA	False	AATAAA	-20	NA	56814669	56858444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_56814697_56819472_56819806_56822837_56822897_56826073_56826219_56827506_56827613_56829741_56829806_56830643_56830752_56830969_56831153_56831576_56831721_56832194_56832367_56833308_56833396_56837036_56837205_56837314_56837423_56838330_56838502_56839757_56839998_56840324_56840463_56843717_56843829_56844401_56844573_56846836_56847107_56848697_56848818_56850105_56850223_56852703_56852872_56854206_56854435_56854856_56854904_56854981_56855075_56857134
ES.18153.1	chr19	+	4048	14	FSM	ENSMUSG00000025082.9	ENSMUST00000026068.8	4049	14	-2	3	-2	-3	multi-exon	TRUE	canonical	0	0	junction_13	1.44729905555591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGTTTGCCTAGGCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	56862678	56900507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_56863011_56869556_56869619_56873454_56873530_56875309_56875444_56882197_56882308_56886305_56886498_56889959_56890094_56890667_56890801_56891898_56891955_56893910_56894019_56894821_56895395_56897263_56897816_56898121_56898248_56899046
ES.18154.1	chr19	-	3365	16	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	-821	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.28227563335765	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGTTTCCCTTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	56926491	56900790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56926312
ES.18154.2	chr19	-	3576	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	-44	-1	-14	1	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTTTCCCTTGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	56996674	56900791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
ES.18154.3	chr19	-	3448	16	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	166	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.73214266727424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTTTCCCTTGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	56925504	56900791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56924112_56924423_56925460
ES.18154.4	chr19	-	3226	16	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	-716	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.99666527661916	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	56926386	56900792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902680_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906439_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56926312
ES.18154.5	chr19	-	3227	16	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	-372	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.28227563335765	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	56926042	56900792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56925999
ES.18154.6	chr19	-	3482	18	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	-7759	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.22619040018873	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	56933429	56900792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56933301
ES.18154.7	chr19	-	3089	15	NNC	ENSMUSG00000025083.19	novel	3531	19	NA	NA	166	-48	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	3.17596201077367	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAAGTGGTGAGTTAGA	NA	False	NA	NA	False	CATAAA	-14	NA	56925504	56900840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925460
ES.18155.1	chr19	+	2319	7	Antisense	novelGene_ENSMUSG00000025085.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTACCAAGAGTTGTAC	NA	False	NA	NA	False	NA	NA	NA	57024729	57034199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_57025770_57027838_57027920_57028918_57028997_57030342_57030408_57031428_57031498_57032231_57032331_57033312
ES.18156.1	chr19	+	2584	1	Intergenic	novelGene_15062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGAGAAGTGATTTCTG	NA	False	NA	NA	False	NA	NA	NA	57042007	57044591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57042000_57044600
ES.18157.1	chr19	+	157	1	Intergenic	novelGene_15063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	57070471	57070628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57070500_57070600
ES.18158.1	chr19	+	177	1	Intergenic	novelGene_15065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACCAG	NA	False	NA	NA	False	NA	NA	NA	57131425	57131602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57131400_57131600
ES.18159.1	chr19	-	6070	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	19.9193931188232	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACCAGCGCTCATTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	57107430	57021164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.11	chr19	-	5593	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.5351448606552	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGGCAGTCCTTTGA	NA	False	NA	-4	True	AATAAA	-21	NA	57107483	57021700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.12	chr19	-	6059	21	NNC	ENSMUSG00000025085.17	novel	3184	23	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2897429534519	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGGCAGTCCTTTGA	7761	False	NA	-4	True	AATAAA	-21	NA	57170779	57021700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57170657
ES.18159.13	chr19	-	5496	17	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.0516108632551	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGGCAGTCCTTTGA	NA	False	NA	-4	True	AATAAA	-21	NA	57107429	57021700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57022612_57022652_57025770_57027838_57027920_57028914_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.14	chr19	-	5568	17	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0578625332284	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGGCAGTCCTTTGA	NA	False	NA	-4	True	AATAAA	-21	NA	57107367	57021700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57025937_57026035_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.15	chr19	-	5316	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	5815	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7626775696075	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	1709	False	NA	-7	True	AATAAA	-18	NA	57117294	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57117262
ES.18159.17	chr19	-	5682	17	NNC	ENSMUSG00000025085.17	novel	5907	21	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.6922258946441	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57107476	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.19	chr19	-	6047	21	NNC	ENSMUSG00000025085.17	novel	2231	22	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.2314233820942	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57185837	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57185730
ES.18159.2	chr19	-	6600	21	NNC	ENSMUSG00000025085.17	novel	3184	23	NA	NA	3799	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.5706539694861	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCACCAGCGCTCATTTGT	312	False	NA	NA	False	AATAAA	-21	NA	57182024	57021165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57181896
ES.18159.20	chr19	-	5749	17	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.0618279492189	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57107450	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57029741_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033495_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.21	chr19	-	5407	15	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.3957452647293	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	NA	False	NA	-7	True	AATAAA	-18	NA	57107374	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027926_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.23	chr19	-	6033	21	NNC	ENSMUSG00000025085.17	novel	2231	22	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.1057019258012	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGAGTGGCAGTCCTT	7790	False	NA	-7	True	AATAAA	-18	NA	57170750	57021703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57170657
ES.18159.26	chr19	-	7892	6	NIC	ENSMUSG00000025085.17	novel	6232	22	NA	NA	775	0	intron_retention	FALSE	canonical	0	0	junction_2	28.9924128005932	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57034895	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_57025770_57027838_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312
ES.18159.27	chr19	-	5789	19	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.5008946028224	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107441	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57029741_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57036798_57036866_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57104829_57104898_57107183
ES.18159.28	chr19	-	6900	15	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	57	junction_10	9.85507224628982	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107453	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_57025770_57027838_57027920_57028918_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.29	chr19	-	6603	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	36	0	intron_retention	FALSE	canonical	0	0	junction_3	25.7512890723725	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107403	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57036798_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.3	chr19	-	5601	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.9193931188232	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCAGTCCTTTGAATCGC	NA	False	NA	1	True	AATAAA	-26	NA	57107492	57021695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.30	chr19	-	5868	20	NNC	ENSMUSG00000025085.17	novel	2231	22	NA	NA	3813	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.5406480147906	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	326	False	NA	-9	True	AATAAA	-16	NA	57182010	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57161756_57161892_57181896
ES.18159.32	chr19	-	5920	20	NNC	ENSMUSG00000025085.17	novel	6232	22	NA	NA	3798	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.4800717264391	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	311	False	NA	-9	True	AATAAA	-16	NA	57182025	57021705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57181896
ES.18159.33	chr19	-	4898	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	4	-636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.9193931188232	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCCTTTGAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	57107435	57022341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.34	chr19	-	4144	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	18	-1382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.5351448606552	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGGAGAGCGGTGTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	57107421	57023087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.35	chr19	-	4244	17	NNC	ENSMUSG00000025085.17	novel	3184	23	NA	NA	-125	-1384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.0848637388118	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATGGGAGAGCGGTGT	8091	False	NA	NA	False	ATTAAA	-19	NA	57123265	57023089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013
ES.18159.36	chr19	-	2887	21	NNC	ENSMUSG00000025085.17	novel	2231	22	NA	NA	3881	47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.3623665227753	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAAGATCTCCTCCTCA	394	False	NA	NA	False	AAGAAA	-18	NA	57181942	57024802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035504_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57181896
ES.18159.37	chr19	-	2193	16	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-33	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.9193931188232	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTCCTGCTTCTGA	NA	False	NA	NA	False	AAAAAG	-24	NA	57107378	57024989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.38	chr19	-	5245	1	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	12	2271	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57107427	57102182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_57102200_57107400
ES.18159.39	chr19	-	3008	1	Genic_Genomic	ENSMUSG00000025085.17	novel	NA	NA	NA	NA	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGTGCACAAGTGTGG	NA	False	NA	NA	False	AATAAA	-31	NA	57107461	57104453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_57104500_57107500
ES.18159.4	chr19	-	5439	15	NNC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.4856526428625	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCAGTCCTTTGAATCG	NA	False	NA	0	True	AATAAA	-25	NA	57107472	57021696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ES.18159.40	chr19	-	1263	1	Intergenic	novelGene_15064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7403	False	NA	NA	False	NA	NA	NA	57111600	57110337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57110300_57111600
ES.1816.1	chr1	+	235	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATCCAAACATTTGGG	NA	False	NA	NA	False	NA	NA	NA	167119514	167119749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167119500_167119700
ES.18160.1	chr19	+	182	1	Intergenic	novelGene_15066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGTTTCCTTCGACCC	NA	False	NA	NA	False	NA	NA	NA	57243261	57243443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57243300_57243400
ES.18161.1	chr19	+	172	1	Intergenic	novelGene_15067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	57285503	57285675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57285500_57285700
ES.18162.1	chr19	-	94	1	Intergenic	novelGene_15068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTCCAGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	57346881	57346787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57346800_57346900
ES.18163.1	chr19	-	1415	2	Genic_Genomic	ENSMUSG00000097785.3	novel	1197	3	NA	NA	85	-35798	multi-exon	TRUE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGGGACTGGAGTATT	9389	False	NA	NA	False	AATAAA	-14	NA	57349086	57347614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_57347841_57347897
ES.18163.2	chr19	-	1675	1	Genic_Genomic	ENSMUSG00000097785.3	novel	NA	NA	NA	NA	-85	-35801	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAACGGGACTGGAGT	9183	False	NA	NA	False	AATAAA	-11	NA	57349292	57347617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_57347600_57349300
ES.18164.1	chr19	+	5579	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-105	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.3221205234183	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57349356	57378026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375293_57375427
ES.18164.10	chr19	+	3450	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	301	2200	-49	-2200	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTGACTTCCGTAC	NA	False	NA	NA	False	NA	NA	NA	57349412	57375818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.11	chr19	+	5621	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	27.9237242322725	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349420	57378018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373706_57373827_57374711_57374816_57374902
ES.18164.13	chr19	+	5702	16	ISM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	339	-3	-11	3	intron_retention	FALSE	canonical	3	86	junction_15	12.3745258046072	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATTGTCGTATATTT	NA	False	NA	5	True	AATAAA	-16	NA	57349450	57378021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711
ES.18164.15	chr19	+	3137	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-8	-2431	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	26.2308710063162	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTTTTACTCTTTT	NA	False	NA	NA	False	GATAAA	-34	NA	57349453	57375587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.16	chr19	+	7984	13	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	0	3	intron_retention	FALSE	non_canonical	0	0	junction_3	30.1950833010203	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATTGTCGTATATTT	NA	False	NA	5	True	AATAAA	-16	NA	57349461	57378021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359910_57360209_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.17	chr19	+	3790	19	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	4	-190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	34.8918965441038	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACGCGCCATGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	57349465	57377828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375293_57375427_57375528_57377009
ES.18164.18	chr19	+	5722	16	NIC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	11	-193	intron_retention	FALSE	canonical	3	86	junction_14	11.4554208419711	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCCACGCGCCATGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	57349472	57377825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.19	chr19	+	3020	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	13	-2435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.3221205234183	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGTTCTTTTACTC	NA	False	NA	NA	False	GATAAA	-30	NA	57349474	57375583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375292_57375424
ES.18164.2	chr19	+	5652	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-84	8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	26.2308710063162	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57349377	57378026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.20	chr19	+	5024	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	13	-523	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	26.2308710063162	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTTGCTAGTGTAAAG	NA	False	NA	NA	False	NA	NA	NA	57349474	57377495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.21	chr19	+	4046	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	364	1541	14	-1541	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAAAACG	NA	False	NA	NA	False	NA	NA	NA	57349475	57376477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.22	chr19	+	5291	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	365	295	15	-295	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCGTAACACTTAGATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	57349476	57377723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.23	chr19	+	4998	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	18	-451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.3221205234183	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGTAAAGTCTCCATAA	NA	False	NA	NA	False	NA	NA	NA	57349479	57377567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375292_57375425
ES.18164.24	chr19	+	5764	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	34	8	intron_retention	FALSE	non_canonical	0	0	junction_16	27.9976980080506	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57349495	57378026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375298_57375433
ES.18164.25	chr19	+	6767	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	35.5307965010637	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349498	57378018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57368015_57368194_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.26	chr19	+	3944	19	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	43	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	34.8918965441038	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATTGTCGTATATTT	NA	False	NA	5	True	AATAAA	-16	NA	57349504	57378021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375293_57375427_57375528_57377009
ES.18164.28	chr19	+	5911	16	NIC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	51	4	intron_retention	FALSE	canonical	3	86	junction_14	12.1307689597797	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATTGTCGTATATTTT	NA	False	NA	6	True	AATAAA	-17	NA	57349512	57378022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.29	chr19	+	5529	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	58	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.0406373634766	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGTCGTATATTTTT	NA	False	NA	7	True	AATAAA	-18	NA	57349519	57378023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367612_57369054_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.3	chr19	+	3283	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	266	2402	-84	-2402	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATATTTGTGGTTGATTT	NA	False	NA	NA	False	AAGAAA	-27	NA	57349377	57375616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.30	chr19	+	5368	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	65	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	34.6685741645381	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57349526	57378026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375293_57375427
ES.18164.31	chr19	+	2931	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	66	-2428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	34.6685741645381	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTACTCTTTTGTG	NA	False	NA	NA	False	GATAAA	-37	NA	57349527	57375590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375293_57375427
ES.18164.32	chr19	+	5428	16	NIC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	66	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.6965735469121	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACAGAACATTGTCGTA	NA	False	NA	0	True	AATAAA	-11	NA	57349527	57378016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.33	chr19	+	1418	8	ISM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	416	8812	66	-8812	5prime_fragment	FALSE	canonical	3	95	junction_5	9.98366011980351	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCAAAAGTGTCTTAAT	NA	False	NA	NA	False	AGTAAA	-12	NA	57349527	57369206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031
ES.18164.34	chr19	+	2826	16	ISM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	7843	2435	7493	-2435	3prime_fragment	FALSE	canonical	3	86	junction_14	11.2170505134916	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGTTCTTTTACTC	NA	False	NA	NA	False	GATAAA	-30	NA	57356954	57375583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.35	chr19	+	2827	14	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	11955	-2438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.8560024709018	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGAAATGTTCTTTTA	187	False	NA	NA	False	GATAAA	-27	NA	57361416	57375580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57368691_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.36	chr19	+	3178	10	NIC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	12286	-2403	intron_retention	FALSE	canonical	3	86	junction_9	12.0133670406893	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATATTTGTGGTTGATT	518	False	NA	NA	False	AAGAAA	-26	NA	57361747	57375615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711
ES.18164.37	chr19	+	2488	6	ISM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	16345	7775	15995	-7775	internal_fragment	FALSE	canonical	3	95	junction_1	13.3925352342266	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAACTATACGGAG	4227	False	NA	NA	False	AATGAA	-35	NA	57365456	57370243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155
ES.18164.4	chr19	+	5891	18	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	35.6899373254924	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349379	57378018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57368691_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902_57375292_57375423
ES.18164.5	chr19	+	5487	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	275	189	-75	-189	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCGCCATGTGGGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	57349386	57377829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.6	chr19	+	5226	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	275	450	-75	-450	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTAAAGTCTCCATAAG	NA	False	NA	NA	False	NA	NA	NA	57349386	57377568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.7	chr19	+	5684	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	275	-8	-75	8	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCGTATATTTTTGTA	NA	False	NA	10	True	AATAAA	-21	NA	57349386	57378026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18164.8	chr19	+	3017	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	295	2639	-55	-2639	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAATTTTATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	57349406	57375379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ES.18165.1	chr19	-	1155	1	Intergenic	novelGene_15069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57394040	57392885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57392900_57394000
ES.18166.1	chr19	-	179	1	Intergenic	novelGene_15070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	NA	False	NA	NA	False	NA	NA	NA	57438002	57437823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57437800_57438000
ES.18167.1	chr19	+	1696	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	-6	2099	-6	1889	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTCTCCTGCCTGTT	NA	False	NA	9	True	TATAAA	-22	NA	57441337	57477338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.10	chr19	+	6505	6	FSM	ENSMUSG00000025086.14	ENSMUST00000237166.2	2513	6	0	-3992	0	4	multi-exon	FALSE	canonical	3	178	junction_4	16.6901168360201	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTGCAGTAAGCTCT	NA	False	NA	22	True	AATAAA	-22	NA	57441370	57479441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504
ES.18167.11	chr19	+	3574	8	NIC	ENSMUSG00000025086.14	novel	3789	8	NA	NA	1	1888	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	71.4111407303382	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATGCTCTCCTGCCTGT	NA	False	NA	8	True	TATAAA	-21	NA	57441371	57477337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57473783_57475754_57476440
ES.18167.12	chr19	+	4367	7	FSM	ENSMUSG00000025086.14	ENSMUST00000026072.5	1564	7	6	-2809	1	1994	multi-exon	FALSE	canonical	0	0	junction_6	76.8803182442251	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTTTATGAGTGCTTC	NA	False	NA	114	True	NA	NA	NA	57441371	57477443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57473783
ES.18167.14	chr19	+	1505	3	NNC	ENSMUSG00000025086.14	novel	2513	6	NA	NA	3	-18003	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	106.5	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATACTTGCGTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	57441373	57454055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57441629_57446521_57446621_57452904
ES.18167.15	chr19	+	192	1	Intergenic	novelGene_15071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGACATAGGAATTGGG	NA	False	NA	NA	False	NA	NA	NA	57451849	57452041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57451800_57452000
ES.18167.16	chr19	+	3424	2	NNC	ENSMUSG00000025086.14	novel	424	4	NA	NA	16626	-9809	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCTAGATGTTGGATTA	5077	False	NA	NA	False	ATTAAA	-18	NA	57458014	57462249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57461213_57462023
ES.18167.17	chr19	+	6199	4	ISM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	25745	1992	25700	-1992	3prime_fragment	FALSE	canonical	3	146	junction_2	18.5472369909914	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTATGAGTGCTTCAT	NA	False	NA	116	True	NA	NA	NA	57467088	57477445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.18	chr19	+	4993	2	ISM	ENSMUSG00000025086.14	ENSMUST00000237166.2	2513	6	29556	-1889	29538	1889	3prime_fragment	FALSE	canonical	3	188	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTCTCCTGCCTGTT	NA	False	NA	9	True	TATAAA	-22	NA	57470926	57477338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57472086_57473504
ES.18167.19	chr19	+	4591	2	ISM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	32813	3	32768	-3	3prime_fragment	FALSE	canonical	3	152	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACGAGTTCTTTGCAGT	NA	False	NA	15	True	AATAAA	-15	NA	57474156	57479434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57475754_57476440
ES.18167.2	chr19	+	3798	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	-6	-3	-6	3	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTTTGCAGTAAGCTC	NA	False	NA	21	True	AATAAA	-21	NA	57441337	57479440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.3	chr19	+	4425	6	FSM	ENSMUSG00000025086.14	ENSMUST00000237166.2	2513	6	-19	-1893	8	1893	multi-exon	FALSE	canonical	3	178	junction_4	16.6901168360201	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57441351	57477342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504
ES.18167.4	chr19	+	1182	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	13	2594	-9	1394	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCCTTAGTCTTTTTC	NA	False	NA	NA	False	GATAAA	-18	NA	57441356	57476843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.5	chr19	+	1361	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	13	2415	-9	1573	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTCCTGTGTGTTTGC	NA	False	NA	NA	False	AATACA	-19	NA	57441356	57477022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.6	chr19	+	3723	7	NIC	ENSMUSG00000025086.14	novel	3789	8	NA	NA	1	1893	intron_retention	FALSE	canonical	3	152	junction_6	24.1275545567488	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57441366	57477342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57475754_57476440
ES.18167.7	chr19	+	1034	7	NNC	ENSMUSG00000025086.14	novel	1564	7	NA	NA	0	-329	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	76.1498887428968	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAAATAGAACTCTTAC	NA	False	NA	NA	False	NA	NA	NA	57441370	57474305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57473979
ES.18167.8	chr19	+	1770	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	1992	0	-1992	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTATGAGTGCTTCAT	NA	False	NA	116	True	NA	NA	NA	57441370	57477445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ES.18167.9	chr19	+	3842	10	NNC	ENSMUSG00000025086.14	novel	3789	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.3202371764381	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGAGTTCTTTGCAGTA	NA	False	NA	16	True	AATAAA	-16	NA	57441370	57479435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57473783_57473930_57475696_57475754_57476440_57476902_57476965
ES.18168.1	chr19	+	952	4	NNC	ENSMUSG00000117655.2	novel	905	3	NA	NA	-3114	-69	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGGAGTCTGGAAATT	NA	False	NA	NA	False	AATATA	-26	NA	57493881	57500607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57494125_57497579_57497668_57498530_57498832_57500287
ES.18169.1	chr19	+	6049	1	Intergenic	novelGene_15072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATACGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	57502968	57509017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57503000_57509000
ES.1817.1	chr1	-	177	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	167124795	167124618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167124600_167124800
ES.18170.1	chr19	-	169	1	Intergenic	novelGene_15073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	57566520	57566351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57566400_57566500
ES.18171.1	chr19	-	164	1	Intergenic	novelGene_15074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAGAAAGGCTTG	NA	False	NA	NA	False	AATAAA	-44	NA	57573166	57573002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57573000_57573200
ES.18172.1	chr19	+	3839	20	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	-82	-401226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.20164985808542	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGTTCGTGTACATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57599383	57720549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57720249
ES.18172.10	chr19	+	4270	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	2	-486023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.2875881934985	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAACAGTCACTTGTGA	NA	False	NA	NA	False	NA	NA	NA	57599467	57635752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57632626
ES.18172.11	chr19	+	2443	10	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	3	-470409	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	11.8269414139868	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTCGTCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	57599468	57651366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57650769
ES.18172.12	chr19	+	3663	10	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	11	-470409	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	11.4643839243734	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTCGTCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	57599476	57651366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57649541
ES.18172.13	chr19	+	4036	21	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	19	-401057	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	10.4750894984243	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTACCTAAATTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	57599484	57720718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57720249
ES.18172.14	chr19	+	1475	6	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	19	482738	19	-482738	5prime_fragment	FALSE	canonical	3	21	junction_5	5.2	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGAGTGATTTATTTTA	NA	False	NA	NA	False	TATAAA	-14	NA	57599484	57639037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689
ES.18172.15	chr19	+	6393	28	NIC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.1476074470716	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCGTTCTCTGTGTCT	NA	False	NA	18	True	AATAAA	-33	NA	57599503	58121775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57728611_57728665_57740061_57740157_57741656_57741736_57743892_57744051_57766315_57766378_57785856_57785936_57924028_57924137_58030759_58030875_58119524
ES.18172.16	chr19	+	1064	7	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	420	-480777	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	10.5895650944167	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCAAATATTCCTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	57599885	57640998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57640835
ES.18172.17	chr19	+	4210	1	Intergenic	novelGene_15076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGTGGTAACAGTCAC	NA	False	NA	NA	False	NA	NA	NA	57631536	57635746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57631500_57635700
ES.18172.18	chr19	+	1201	1	Intergenic	novelGene_15077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCAAATATTCCTTTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	57639797	57640998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_57639800_57641000
ES.18172.19	chr19	+	4165	16	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	80732	5	80732	-5	3prime_fragment	FALSE	canonical	0	0	junction_13	3.87928974026031	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCACCTCGTTCTCTG	NA	False	NA	13	True	AATAAA	-28	NA	57680197	58121770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57728611_57728665_57740061_57740157_57741656_57741736_57743892_57744051_57766315_57766378_57785856_57785936_57924028_57924137_58030759_58030875_58119524
ES.18172.2	chr19	+	5454	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	-82	-486011	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	10.1469207151727	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGATGTTACTGAGCC	NA	False	NA	NA	False	NA	NA	NA	57599383	57635764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57631538
ES.18172.3	chr19	+	2914	6	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	-47	-488516	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	10.1469207151727	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTAAATAAAAATCAAA	NA	False	NA	NA	False	GATAAA	-12	NA	57599418	57633259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57631538
ES.18172.4	chr19	+	3950	10	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-25	458149	-25	-458149	5prime_fragment	FALSE	canonical	2	3	junction_9	11.4643839243734	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTTGTTCATTGGAA	NA	False	NA	NA	False	AAGAAA	-13	NA	57599440	57663626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550
ES.18172.5	chr19	+	6608	29	FSM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_26	9.87905173917548	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCGTTCTCTGTGTCT	NA	False	NA	18	True	AATAAA	-33	NA	57599443	58121775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57728611_57728665_57740061_57740157_57741656_57741736_57743892_57744051_57766315_57766378_57785856_57785936_57924028_57924137_58030759_58030875_58119524
ES.18172.6	chr19	+	1827	8	ISM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	-6	478161	-6	-478161	5prime_fragment	FALSE	canonical	3	13	junction_6	8.8132553229641	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGTCCTTGAATAC	NA	False	NA	NA	False	AATATA	-18	NA	57599459	57643614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202
ES.18172.7	chr19	+	2360	10	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	0	-471723	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	11.4643839243734	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTTTCACAGTTAATT	NA	False	NA	NA	False	TATAAA	-19	NA	57599465	57650052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57649541
ES.18172.8	chr19	+	3887	21	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	1	-401224	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	10.4750894984243	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTCGTGTACATTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	57599466	57720551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57720249
ES.18172.9	chr19	+	4030	18	NNC	ENSMUSG00000054843.10	novel	6586	29	NA	NA	2	-428768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	11.0073897794975	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTCGTATTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	57599467	57693007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57692110
ES.18173.1	chr19	-	4543	1	Intergenic	novelGene_15075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTCTAAATTTCAA	NA	False	NA	NA	False	NA	NA	NA	57607328	57602785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57602800_57607300
ES.18174.1	chr19	-	7590	1	Antisense	novelGene_ENSMUSG00000054843.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCCTCACTGCCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	57647735	57640145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_57640100_57647700
ES.18174.2	chr19	-	2311	1	Antisense	novelGene_ENSMUSG00000054843.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGGGCCTCCTATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	57647522	57645211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_57645200_57647500
ES.18174.3	chr19	-	6320	1	Intergenic	novelGene_15078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCTTTTCCATACC	NA	False	NA	NA	False	TTTAAA	-14	NA	57652518	57646198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57646200_57652500
ES.18174.4	chr19	-	5926	1	Intergenic	novelGene_15079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTAAAATGTGAGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	57653897	57647971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57648000_57653900
ES.18175.1	chr19	-	612	1	Intergenic	novelGene_15080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTATCAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57671962	57671350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57671400_57672000
ES.18176.1	chr19	-	185	1	Intergenic	novelGene_15081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGAGAGACAGAGAG	NA	False	NA	NA	False	NA	NA	NA	57718286	57718101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57718100_57718300
ES.18177.1	chr19	-	5969	1	Intergenic	novelGene_15082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	57799076	57793107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57793100_57799100
ES.18178.1	chr19	-	3859	1	Intergenic	novelGene_15083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGAACTTCTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	57812623	57808764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_57808800_57812600
ES.18179.1	chr19	-	414	1	Intergenic	novelGene_15084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGATGATGAAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	58015284	58014870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_58014900_58015300
ES.1818.1	chr1	-	205	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTCCAAGTAACCAAG	NA	False	NA	NA	False	NA	NA	NA	167128313	167128108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167128100_167128300
ES.18180.1	chr19	+	6843	1	Intergenic	novelGene_15085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGCACTCATATATACA	NA	False	NA	NA	False	TTTAAA	-37	NA	58393783	58400626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_58393800_58400600
ES.18181.1	chr19	-	3870	7	NNC	ENSMUSG00000025089.16	novel	4415	9	NA	NA	12797	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.86744175568088	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGATGGCATAGGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	58430101	58224041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289022_58429997
ES.18181.2	chr19	-	4540	10	NIC	ENSMUSG00000025089.16	novel	4641	11	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	2.51415744421884	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGATGGCATAGGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	58443750	58224041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58440400_58440485_58441595_58441890_58442740_58443027_58443629
ES.18181.3	chr19	-	4507	10	NNC	ENSMUSG00000025089.16	novel	4641	11	NA	NA	8	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.51415744421884	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATATAGACA	NA	False	NA	NA	False	NA	NA	NA	58443725	58224060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289022_58440400_58440485_58441595_58441890_58442740_58443027_58443629
ES.18181.4	chr19	-	3014	7	NNC	ENSMUSG00000025089.16	novel	4415	9	NA	NA	12769	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.86744175568088	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCGGTCATGAATGGGA	NA	False	NA	NA	False	AATAAA	-23	NA	58430129	58224925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289022_58429997
ES.18182.1	chr19	+	4290	5	ISM	ENSMUSG00000025090.10	ENSMUST00000235305.2	855	7	-8	21895	-8	-21838	5prime_fragment	FALSE	canonical	3	10	junction_1	12.8135670287395	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGAGAGTGAATTTG	NA	False	NA	NA	False	AGTAAA	-6	NA	58500415	58519622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58515703
ES.18182.10	chr19	+	3095	8	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-2	1782	intron_retention	FALSE	canonical	2	13	junction_5	11.9608203936768	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCATTTGCCTGCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	58500450	58543299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.11	chr19	+	3925	5	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	0	3343	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.017180121086	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACCCTCTTAATCT	NA	False	NA	NA	False	AATAAA	-38	NA	58500452	58544860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500498_58500742_58500868_58501047_58501134_58539855_58539948_58541283
ES.18182.12	chr19	+	1022	9	NNC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6138564681861	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTTAAGTTGGTCTGT	NA	False	NA	NA	False	ACTAAA	-3	NA	58500452	58541515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500498_58500742_58500826_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.13	chr19	+	1214	6	NIC	ENSMUSG00000025090.10	novel	855	7	NA	NA	0	104	intron_retention	FALSE	canonical	2	6	junction_4	13.1969693490589	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTTTGTTGGTGCCA	NA	False	NA	NA	False	NA	NA	NA	58500452	58541621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58539855_58539948_58541283
ES.18182.14	chr19	+	3456	3	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	0	37127	0	-37127	5prime_fragment	FALSE	canonical	0	0	junction_1	22.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTTTATTGACCCAT	NA	False	NA	NA	False	AATATA	-18	NA	58500452	58504333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500498_58500742_58500868_58501047
ES.18182.15	chr19	+	4625	8	NNC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	0	3356	intron_retention	FALSE	canonical	2	4	junction_1	11.3874259333598	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCTCCATCTAATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	58500452	58544873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500826_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.16	chr19	+	2981	7	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	2	1775	intron_retention	FALSE	canonical	1	2	junction_5	14.360439485692	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATAAAGAGCATTTGC	NA	False	NA	NA	False	AATAAA	-12	NA	58500454	58543292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58539859_58539948_58541283
ES.18182.17	chr19	+	1050	6	NIC	ENSMUSG00000025090.10	novel	855	7	NA	NA	2	-1	intron_retention	FALSE	canonical	2	6	junction_4	13.1969693490589	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAGAGGTCCTTGTACA	NA	False	NA	NA	False	AATACA	-13	NA	58500454	58541459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58539855_58539948_58541283
ES.18182.18	chr19	+	4659	8	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	3	3351	intron_retention	FALSE	canonical	2	13	junction_5	11.9608203936768	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTAATCTCCATCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	58500455	58544868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.19	chr19	+	4535	4	ISM	ENSMUSG00000025090.10	ENSMUST00000235305.2	855	7	39	21887	10	-21830	internal_fragment	FALSE	canonical	3	27	junction_2	7.36357401145817	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAATTTGCTTATCTG	NA	False	NA	NA	False	AGTAAA	-14	NA	58500462	58519630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703
ES.18182.2	chr19	+	654	5	NNC	ENSMUSG00000025090.10	novel	855	7	NA	NA	-7	-26361	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	15.9765453086705	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACTTCTAAATGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	58500416	58515099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58514815
ES.18182.20	chr19	+	7069	9	FSM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	11	-6071	11	6014	multi-exon	FALSE	canonical	0	0	junction_1	14.1686273153048	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACATTCTCTTATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	58500463	58547531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.21	chr19	+	5746	9	NNC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	37	1779	intron_retention	FALSE	canonical	0	0	junction_2	15.9211926374879	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGAGCATTTGCCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	58500489	58543296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500868_58501047_58501134_58510901_58513595_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.22	chr19	+	1205	8	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	52	-3	52	3	3prime_fragment	FALSE	canonical	2	13	junction_5	11.9608203936768	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTCCTTGTACAGTTT	NA	False	NA	NA	False	AATACA	-17	NA	58500504	58541463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.23	chr19	+	4829	6	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	9808	-57	9808	0	3prime_fragment	FALSE	canonical	2	13	junction_3	10.7256701422335	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAAGTTGGTCTGTCC	NA	False	NA	NA	False	ACTAAA	-5	NA	58510260	58541517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.24	chr19	+	3747	2	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	10673	25281	10673	-25281	internal_fragment	FALSE	canonical	3	35	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGTTATGAGC	NA	False	NA	NA	False	AATAAA	-20	NA	58511125	58516179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58514397_58515703
ES.18182.25	chr19	+	4631	2	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	13241	21829	13241	-21829	internal_fragment	FALSE	canonical	3	35	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATTTGCTTATCTGA	1698	False	NA	NA	False	AGTAAA	-15	NA	58513693	58519631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58514397_58515703
ES.18182.26	chr19	+	5057	4	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	20010	-57	20010	0	3prime_fragment	FALSE	canonical	2	13	junction_1	10.8423039781937	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAAGTTGGTCTGTCC	8467	False	NA	NA	False	ACTAAA	-5	NA	58520462	58541517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.3	chr19	+	1514	5	NNC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	3	-24612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7089048115069	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTGTTTTATCTTTA	NA	False	NA	NA	False	NA	NA	NA	58500426	58516848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500498_58500772_58500868_58501047_58501134_58514279_58514397_58515703
ES.18182.4	chr19	+	834	5	ISM	ENSMUSG00000025090.10	ENSMUST00000235305.2	855	7	3	25340	3	-25283	5prime_fragment	FALSE	canonical	3	10	junction_1	12.8135670287395	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGGTTTTGTTATGA	NA	False	NA	NA	False	AATAAA	-18	NA	58500426	58516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500459_58500742_58500868_58501047_58501134_58514279_58514397_58515703
ES.18182.5	chr19	+	4106	5	NNC	ENSMUSG00000025090.10	novel	855	7	NA	NA	3	3351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.017180121086	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTAATCTCCATCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	58500426	58544868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58500677_58500774_58500868_58501047_58501134_58539855_58539948_58541283
ES.18182.6	chr19	+	499	5	NIC	ENSMUSG00000025090.10	novel	855	7	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	18.0693109995927	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAAGAGGTCCTTGTAC	NA	False	NA	NA	False	AATACA	-12	NA	58500433	58541458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500459_58500742_58500868_58501047_58501134_58539859_58539948_58541283
ES.18182.7	chr19	+	4434	9	FSM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	-17	-3408	12	3351	multi-exon	FALSE	canonical	0	0	junction_1	14.1686273153048	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTAATCTCCATCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	58500435	58544868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ES.18182.8	chr19	+	2557	5	ISM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	-13	23586	-13	-23586	5prime_fragment	FALSE	canonical	0	0	junction_1	16.7089048115069	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGAATTTCATATCAC	NA	False	NA	NA	False	AATAAA	-16	NA	58500439	58517874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703
ES.18182.9	chr19	+	1094	4	NIC	ENSMUSG00000025090.10	novel	1009	9	NA	NA	-2	-25283	intron_retention	FALSE	canonical	3	27	junction_2	7.36357401145817	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGGTTTTGTTATGA	NA	False	NA	NA	False	AATAAA	-18	NA	58500450	58516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_58500868_58501047_58501134_58514279_58514397_58515703
ES.18183.1	chr19	-	5443	1	Intergenic	novelGene_15086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAACAATTCCAATGGT	NA	False	NA	NA	False	NA	NA	NA	58513281	58507838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_58507800_58513300
ES.18184.1	chr19	+	1305	9	NNC	ENSMUSG00000025091.5	novel	1572	12	NA	NA	2858	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.31695671910659	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTCTGAGGTTCAGGT	6872	False	NA	NA	False	AATAAA	-13	NA	58751008	58765955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_58751327_58751760_58751873_58753159_58753280_58754693_58754814_58756995_58757115_58759765_58759896_58762501_58762614_58763569_58763738_58765849
ES.18185.1	chr19	+	3307	2	Antisense	novelGene_ENSMUSG00000025092.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGCAAGGCCGACAAAA	NA	False	NA	NA	False	NA	NA	NA	58792013	58795995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_58793161_58793835
ES.18185.2	chr19	+	3980	1	Antisense	novelGene_ENSMUSG00000025092.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGCAAGGCCGACAA	NA	False	NA	NA	False	NA	NA	NA	58792013	58795993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_58792000_58796000
ES.18186.1	chr19	-	5750	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	-16	0	12	0	multi-exon	TRUE	canonical	2	6	junction_2	4.33704016068239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCTAGAATCGTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	58849432	58784181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ES.18186.2	chr19	-	5813	12	NIC	ENSMUSG00000025092.8	novel	5734	12	NA	NA	32	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	5.37825434827238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACGGCCTAGAATCGTT	NA	False	NA	-4	True	AATAAA	-16	NA	58849038	58784184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58848818
ES.18186.3	chr19	-	4478	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	-47	1303	-19	-1303	multi-exon	FALSE	canonical	2	6	junction_2	4.33704016068239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATACTCGCAATTTTG	NA	False	NA	NA	False	TATAAA	-32	NA	58849463	58785484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ES.18186.4	chr19	-	1148	7	NNC	ENSMUSG00000025092.8	novel	877	7	NA	NA	-20	3534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.35889894354067	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTCTTAAGATTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	58849464	58804616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_58804959_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ES.18186.5	chr19	-	1473	7	NNC	ENSMUSG00000025092.8	novel	1400	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.35889894354067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTTCTGTCAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	58849448	58808152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_58808836_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ES.18186.6	chr19	-	2138	6	NIC	ENSMUSG00000025092.8	novel	1400	7	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_5	4.74973683481517	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTTCTGTCAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	58849057	58808152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58848818
ES.18187.1	chr19	-	640	1	Genic_Genomic	ENSMUSG00000025092.8	novel	NA	NA	NA	NA	14951	611	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATGTCTCTTTGGATCA	NA	False	NA	NA	False	NA	NA	NA	58917104	58916464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_58916500_58917100
ES.18188.1	chr19	-	3633	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	481	-140	450	0	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGTCCGCTGTGGTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	59064051	58961787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
ES.18188.2	chr19	-	4118	1	NIC	ENSMUSG00000041362.18	novel	3769	15	NA	NA	60812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGTCCGCTGTGGTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	58965905	58961787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_58961800_58965900
ES.18188.3	chr19	-	3496	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	478	0	447	0	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTTTCTCTGACTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	59064054	58961927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
ES.18189.1	chr19	-	177	1	Intergenic	novelGene_15087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	59194740	59194563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_59194600_59194700
ES.1819.1	chr1	-	138	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	167135772	167135634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167135600_167135800
ES.18190.1	chr19	+	173	1	Intergenic	novelGene_15088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59195910	59196083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_59195900_59196100
ES.18191.1	chr19	+	1590	1	Intergenic	novelGene_15089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGCAACTTAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	59300830	59302420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_59300800_59302400
ES.18192.1	chr19	+	497	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-83	-18	-83	18	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCC	NA	False	NA	NA	False	AATAAA	-15	NA	59310719	59311216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_59310700_59311200
ES.18193.1	chr19	-	9130	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-59	-3089	-59	3089	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTTCTTTATAAGGC	NA	False	NA	NA	False	NA	NA	NA	59334271	59282520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.10	chr19	-	5955	6	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.7831515782319	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	-33	True	AATAAA	-16	NA	59334253	59285609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150_59333302_59333369
ES.18193.11	chr19	-	5842	4	NIC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	67.4536878161602	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	-33	True	AATAAA	-16	NA	59334235	59285609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_59290141_59303689_59303793_59316182_59316306_59333150
ES.18193.12	chr19	-	2948	5	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.2996789718856	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	-33	True	AATAAA	-16	NA	59334260	59285609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59287059_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.13	chr19	-	5960	6	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.7831515782319	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	-33	True	AATAAA	-16	NA	59334247	59285609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59286317_59286373_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.14	chr19	-	6074	5	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-75	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.959037259085	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGAATATCTTCATT	NA	False	NA	-37	True	AATAAA	-12	NA	59334287	59285613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316327_59333150
ES.18193.15	chr19	-	4617	1	NIC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	43982	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGAATATCTTCATT	6675	False	NA	-37	True	AATAAA	-12	NA	59290230	59285613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_59285600_59290200
ES.18193.16	chr19	-	5842	6	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.7831515782319	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAAGAATATCTTCA	NA	False	NA	-39	True	AATAAA	-10	NA	59334211	59285615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150_59333962_59334094
ES.18193.17	chr19	-	5275	6	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.7831515782319	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAAGAATATCTTCA	NA	False	NA	-39	True	AATAAA	-10	NA	59334200	59285615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59286683_59287371_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.18	chr19	-	4373	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	622	987	622	-987	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTTGGCTGCAGAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	59333590	59286596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.19	chr19	-	4898	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-23	1107	-23	-1107	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATATATCTTAAAAGTC	NA	False	NA	NA	False	AATATA	-15	NA	59334235	59286716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.2	chr19	-	4963	1	Genic_Genomic	ENSMUSG00000074746.4	novel	NA	NA	NA	NA	44980	1340	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTAAGTTCTTTGTTCT	7673	False	NA	NA	False	AATAAA	-16	NA	59289232	59284269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_59284300_59289200
ES.18193.20	chr19	-	4791	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-96	1287	-96	-1287	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTTTAGTAGTTCAG	NA	False	NA	39	True	NA	NA	NA	59334308	59286896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.21	chr19	-	4367	4	NIC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	166	-1326	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	57.2771042098557	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTCTTGTGGCCTT	NA	False	NA	0	True	NA	NA	NA	59334046	59286935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_59290141_59293589_59293753_59303689_59303793_59333150
ES.18193.22	chr19	-	4592	6	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-21	-1326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.7831515782319	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTGTCTTGTGGCCTT	NA	False	NA	0	True	NA	NA	NA	59334233	59286935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59289117_59289201_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.23	chr19	-	3869	4	NIC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	682	-1328	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.9374694525831	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGGTGTCTTGTGGCC	NA	False	NA	-2	True	NA	NA	NA	59333530	59286937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_59290141_59293589_59293753_59316182_59316306_59333150
ES.18193.25	chr19	-	4295	7	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	-20	-1331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.3145600891813	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCTGGTGTCTTGTG	NA	False	NA	-5	True	NA	NA	NA	59334232	59286940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59288080_59288120_59288231_59288550_59290141_59293589_59293743_59303694_59303793_59316182_59316306_59333150
ES.18193.26	chr19	-	4513	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-56	1525	-56	-1525	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAATGTTGATGCTTTC	NA	False	NA	NA	False	NA	NA	NA	59334268	59287134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.27	chr19	-	4263	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-30	1749	-30	-1749	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTTTAATCTGTTATG	NA	False	NA	NA	False	AATGAA	-10	NA	59334242	59287358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.28	chr19	-	4070	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-59	1971	-59	-1971	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTCTTTCATTTTC	NA	False	NA	NA	False	NA	NA	NA	59334271	59287580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.29	chr19	-	3813	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-3	2172	-3	-2172	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGTTTCGGGTTGTGC	NA	False	NA	NA	False	AAGAAA	-38	NA	59334215	59287781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.3	chr19	-	7153	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-75	-1096	-75	1096	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTATTTTATCCCGG	NA	False	NA	3	True	ATTAAA	-20	NA	59334287	59284513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.30	chr19	-	2179	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-22	7274	-22	-7274	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTCAGAAGAGTATT	NA	False	NA	NA	False	TATAAA	-20	NA	59334234	59292883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.31	chr19	-	1406	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	586	7439	586	-7439	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAAAATAAAAATG	NA	False	NA	NA	False	NA	NA	NA	59333626	59293048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.32	chr19	-	1832	4	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-75	7674	-75	-7674	5prime_fragment	FALSE	canonical	3	135	junction_2	6.23609564462324	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTCTTCCTGTATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	59334287	59293283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.4	chr19	-	6263	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-45	-236	-45	236	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTTTTTTTTT	NA	False	NA	73	True	AATGAA	-27	NA	59334257	59285373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.5	chr19	-	4705	1	Genic_Genomic	ENSMUSG00000074746.4	novel	NA	NA	NA	NA	44060	162	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTCTTCATTGTTTTTAA	6753	False	NA	-1	True	ATTAAA	-14	NA	59290152	59285447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_59285400_59290200
ES.18193.6	chr19	-	6186	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-73	-131	-73	131	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAATTAAACT	NA	False	NA	-32	True	ACTAAA	-23	NA	59334285	59285478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.7	chr19	-	6102	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	-93	-27	-93	27	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTGATTGGTTCT	NA	False	NA	-6	True	AATAAA	-43	NA	59334305	59285582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ES.18193.8	chr19	-	5741	3	NIC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	1	26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACAGGTGATTGGTTC	NA	False	NA	-7	True	AATAAA	-42	NA	59334211	59285583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_59290141_59316182_59316306_59333150
ES.18193.9	chr19	-	5324	4	NNC	ENSMUSG00000074746.4	novel	5982	5	NA	NA	544	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	63.9374694525831	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAAACAGGTGATTGGT	NA	False	NA	-9	True	AATAAA	-40	NA	59333668	59285585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_59290141_59293589_59293729_59316193_59316306_59333150
ES.18194.1	chr19	+	3329	1	Intergenic	novelGene_15090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCCCTGGGTAACCG	NA	False	NA	NA	False	NA	NA	NA	59334342	59337671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_59334300_59337700
ES.18194.2	chr19	+	3706	1	Intergenic	novelGene_15091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGTGACGGCTTGGC	NA	False	NA	NA	False	NA	NA	NA	59334361	59338067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_59334400_59338100
ES.18195.1	chr19	+	210	1	Intergenic	novelGene_15092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACCCAGCAACTAACT	NA	False	NA	NA	False	NA	NA	NA	59801906	59802116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_59801900_59802100
ES.18196.1	chr19	-	2719	1	ISM	ENSMUSG00000040022.15	ENSMUST00000171986.8	5363	5	38050	2	37396	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGTCATCAGAATCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	59894036	59891317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_59891300_59894000
ES.18197.1	chr19	-	174	1	Intergenic	novelGene_15093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAGACTAT	NA	False	NA	NA	False	NA	NA	NA	60060908	60060734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60060700_60060900
ES.18198.1	chr19	-	4532	1	Intergenic	novelGene_15094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATCTATTCACTTT	NA	False	NA	NA	False	AATAAA	-8	NA	60169161	60164629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60164600_60169200
ES.18199.1	chr19	-	7220	8	NIC	ENSMUSG00000057858.9	novel	725	8	NA	NA	-2	5334	intron_retention	FALSE	canonical	3	13	junction_7	125.974406211771	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGTTGGTGTTTTGTTC	9791	False	NA	NA	False	AATACA	-16	NA	60215111	60181683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60213296_60213332_60214741
ES.18199.10	chr19	-	2320	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-2	381	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAACCCAG	9791	False	NA	NA	False	NA	NA	NA	60215111	60186636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
ES.18199.11	chr19	-	2418	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	-2	-381	-2	381	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAACCCAG	9771	False	NA	NA	False	NA	NA	NA	60215131	60186636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ES.18199.12	chr19	-	2232	7	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	-2	381	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAACCCAG	9791	False	NA	NA	False	NA	NA	NA	60215111	60186636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
ES.18199.13	chr19	-	2153	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	9	intron_retention	FALSE	canonical	3	98	junction_6	69.6237906338216	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGTCCTTAGGTGT	9776	False	NA	NA	False	AATGAA	-34	NA	60215126	60187008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208793_60208921_60209010_60209485_60209737_60214741
ES.18199.14	chr19	-	1561	8	FSM	ENSMUSG00000057858.9	ENSMUST00000237339.2	725	8	22	-858	-2	9	multi-exon	FALSE	canonical	1	4	junction_7	127.596941937637	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGTCCTTAGGTGT	9791	False	NA	NA	False	AATGAA	-34	NA	60215111	60187008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60213296_60213332_60215075
ES.18199.15	chr19	-	1877	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	8	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGTCCTTAGGTG	9773	False	NA	NA	False	AATGAA	-33	NA	60215129	60187009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
ES.18199.16	chr19	-	2040	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	0	-5	0	5	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGTCATTGTCCTTAG	9773	False	NA	NA	False	AATGAA	-30	NA	60215129	60187012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ES.18199.17	chr19	-	1783	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_6	102.511787940054	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGGGAAGTCATTGTC	9774	False	NA	NA	False	AATGAA	-25	NA	60215128	60187017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60214663
ES.18199.18	chr19	-	1894	8	NNC	ENSMUSG00000057858.9	novel	725	8	NA	NA	1	-6	intron_retention	FALSE	canonical	1	1	junction_6	131.156083989066	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGATACCTGGGAAGTC	9774	False	NA	NA	False	AATGAA	-19	NA	60215128	60187023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209734_60213296_60213332_60214741
ES.18199.19	chr19	-	1527	7	NIC	ENSMUSG00000057858.9	novel	951	8	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	116.899885942345	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGATACCTGGGAAGT	9774	False	NA	NA	False	AATGAA	-18	NA	60215128	60187024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60215075
ES.18199.2	chr19	-	6950	6	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	5333	intron_retention	FALSE	canonical	2	3	junction_5	111.662706397436	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGAGTTGGTGTTTTGTT	9774	False	NA	NA	False	AATACA	-15	NA	60215128	60181684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60214741
ES.18199.20	chr19	-	1611	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-13	-647	-2	-14	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAGAACTGATACCT	9771	False	NA	NA	False	AATGAA	-11	NA	60215131	60187031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
ES.18199.21	chr19	-	1737	7	NIC	ENSMUSG00000057858.9	novel	951	8	NA	NA	1	-14	intron_retention	FALSE	canonical	3	34	junction_6	92.9241028414528	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAGAACTGATACCT	9774	False	NA	NA	False	AATGAA	-11	NA	60215128	60187031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60209010_60209485_60209737_60215075
ES.18199.22	chr19	-	1945	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-2	-14	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAGAACTGATACCT	9771	False	NA	NA	False	AATGAA	-11	NA	60215131	60187031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
ES.18199.23	chr19	-	1753	7	FSM	ENSMUSG00000057858.9	ENSMUST00000235293.2	1598	7	65	-220	57	-109	multi-exon	FALSE	canonical	3	31	junction_5	113.09533834582	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGTCTTGTTTTGGATT	9858	False	NA	NA	False	NA	NA	NA	60215044	60187126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214663
ES.18199.24	chr19	-	1714	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	66	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGATTTAAATTCAGAT	9769	False	NA	NA	False	AGTAAA	-20	NA	60215133	60187264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
ES.18199.25	chr19	-	5320	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-1	2	intron_retention	FALSE	canonical	3	10	junction_7	93.5933453067807	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTGTGTGTGTGTAA	9772	False	NA	NA	False	AGTAAA	-16	NA	60215130	60187328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60213332_60214663
ES.18199.26	chr19	-	1310	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-10	-349	1	1	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGTGTGTGTGTA	9774	False	NA	NA	False	AGTAAA	-15	NA	60215128	60187329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
ES.18199.27	chr19	-	1720	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	1	314	1	-1	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9774	False	NA	NA	False	AGTAAA	-13	NA	60215128	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ES.18199.28	chr19	-	1575	8	NIC	ENSMUSG00000057858.9	novel	725	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	13	junction_7	125.974406211771	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9788	False	NA	NA	False	AGTAAA	-13	NA	60215114	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60213296_60213332_60214741
ES.18199.29	chr19	-	1755	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	10	junction_8	106.243529214724	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9774	False	NA	NA	False	AGTAAA	-13	NA	60215128	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214663
ES.18199.3	chr19	-	3530	1	Intergenic	novelGene_15095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTCAGCTCTCGAGG	NA	False	NA	NA	False	AATATA	-19	NA	60185899	60182369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60182400_60185900
ES.18199.30	chr19	-	1303	6	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	-1	intron_retention	FALSE	canonical	2	3	junction_5	111.662706397436	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9774	False	NA	NA	False	AGTAAA	-13	NA	60215128	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60214741
ES.18199.31	chr19	-	1616	7	FSM	ENSMUSG00000057858.9	ENSMUST00000235293.2	1598	7	-3	-15	-3	-1	multi-exon	FALSE	canonical	3	31	junction_5	113.09533834582	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9790	False	NA	NA	False	AGTAAA	-13	NA	60215112	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214663
ES.18199.32	chr19	-	1680	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9771	False	NA	NA	False	AGTAAA	-13	NA	60215131	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
ES.18199.33	chr19	-	7031	7	NNC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	22	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	103.217677211265	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTGTGTGTGTG	9823	False	NA	NA	False	AGTAAA	-13	NA	60215079	60187331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60213530_60213572
ES.18199.34	chr19	-	1770	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	98	junction_6	72.4077957742734	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTGTGTGTGTGT	9774	False	NA	NA	False	AGTAAA	-12	NA	60215128	60187332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60209010_60209485_60209737_60214741
ES.18199.35	chr19	-	3625	8	NNC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_6	131.832608768445	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTGTGTGTGTGT	9790	False	NA	NA	False	AGTAAA	-12	NA	60215112	60187332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60211321_60213332_60214663
ES.18199.36	chr19	-	1652	8	NIC	ENSMUSG00000057858.9	novel	725	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	10	junction_7	126.508852638534	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGTTGATTTATTTT	9774	False	NA	NA	False	NA	NA	NA	60215128	60187346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60213296_60213332_60214663
ES.18199.37	chr19	-	1309	5	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	122.299580947769	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGTTGATTTATTTT	9800	False	NA	NA	False	NA	NA	NA	60215102	60187346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60214663
ES.18199.38	chr19	-	5159	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	-64	intron_retention	FALSE	canonical	3	13	junction_7	92.660451022394	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGCTTTAAAAATAATTA	9773	False	NA	NA	False	AATAGA	-43	NA	60215129	60187410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60213332_60214741
ES.18199.39	chr19	-	1396	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	146	-93	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATTTTACAAATAATTT	9947	False	NA	NA	False	CATAAA	-18	NA	60214955	60187439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
ES.18199.4	chr19	-	4667	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	2703	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAATGTGCAAAATC	9801	False	NA	NA	False	AATAAA	-11	NA	60215101	60184314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
ES.18199.40	chr19	-	958	7	NIC	ENSMUSG00000057858.9	novel	951	8	NA	NA	1	85	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	116.899885942345	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTTTGTGTTTGA	9774	False	NA	NA	False	AAAAAG	-41	NA	60215128	60187593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60215075
ES.18199.41	chr19	-	2262	3	NNC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	-46	intron_retention	FALSE	non_canonical	0	0	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCAGTCTTTTTTTCTC	9774	False	NA	NA	False	CATAAA	-22	NA	60215128	60187724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60187874_60212972_60213530_60213572
ES.18199.42	chr19	-	1235	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	84	716	56	-55	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCATCCTTTTCAGTCT	9857	False	NA	NA	False	CATAAA	-13	NA	60215045	60187733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ES.18199.43	chr19	-	1150	7	NIC	ENSMUSG00000057858.9	novel	1598	7	NA	NA	1	-57	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATCATCCTTTTCAGT	9774	False	NA	NA	False	CATAAA	-11	NA	60215128	60187735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
ES.18199.44	chr19	-	1207	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	-2	-71	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTCAGAGCTGATTA	9791	False	NA	NA	False	GATAAA	-19	NA	60215111	60187749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
ES.18199.5	chr19	-	4096	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	1	-3146	1	2485	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCATTTTGAAACATGGT	9785	False	NA	NA	False	AATAAA	-16	NA	60215117	60184532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
ES.18199.6	chr19	-	4482	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	17	-2464	-3	2464	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTGATGTTGTATCG	9790	False	NA	NA	False	ATTAAA	-16	NA	60215112	60184553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ES.18199.7	chr19	-	4400	7	FSM	ENSMUSG00000057858.9	ENSMUST00000235293.2	1598	7	-11	-2791	-2	2462	multi-exon	FALSE	canonical	3	31	junction_5	113.09533834582	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAATTGATGTTGTAT	9782	False	NA	NA	False	ATTAAA	-14	NA	60215120	60184555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214663
ES.18199.8	chr19	-	4148	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	1	2365	intron_retention	FALSE	canonical	1	2	junction_6	102.511787940054	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTTTCAAAATGTCTG	9774	False	NA	NA	False	AATAAA	-20	NA	60215128	60184652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60214663
ES.18199.9	chr19	-	2420	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	3	434	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTCCAAATATCAAATCT	9779	False	NA	NA	False	NA	NA	NA	60215123	60186583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
ES.182.1	chr1	+	316	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1156	False	NA	NA	False	NA	NA	NA	23289934	23290250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_23289900_23290200
ES.1820.1	chr1	+	1291	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	283	-1	-9	1	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	False	NA	16	True	AATAAA	-23	NA	167136229	167158355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ES.1820.2	chr1	+	1220	7	NNC	ENSMUSG00000052428.11	novel	1573	7	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	198.530154440635	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCCTTGTCTCCTGTTC	NA	False	NA	12	True	AATAAA	-19	NA	167136302	167158351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153596_167157735
ES.1820.3	chr1	+	1149	6	NIC	ENSMUSG00000052428.11	novel	1573	7	NA	NA	15	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	213.321353830319	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGCCTTGTCTCCTGTT	NA	False	NA	11	True	AATAAA	-18	NA	167136319	167158350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167136503_167136874_167136953_167141675_167141736_167146830_167146899_167153444_167153590_167157735
ES.1820.6	chr1	+	1139	7	NNC	ENSMUSG00000052428.11	novel	1573	7	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.455150498915	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTCTCCTGTTCAAA	NA	False	NA	15	True	AATAAA	-22	NA	167136355	167158354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167136503_167136899_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ES.1820.7	chr1	+	205	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTTTTAGTATGGAGT	NA	False	NA	NA	False	NA	NA	NA	167143447	167143652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167143400_167143700
ES.18200.1	chr19	+	176	1	Intergenic	novelGene_15096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	60325324	60325500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_60325300_60325500
ES.18201.1	chr19	+	176	1	Intergenic	novelGene_15097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60407035	60407211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_60407000_60407200
ES.18202.1	chr19	+	241	2	Intergenic	novelGene_15098	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGTTTCAGCCATTT	NA	False	NA	NA	False	NA	NA	NA	60561179	60724330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_60561381_60724290
ES.18202.2	chr19	+	178	1	Intergenic	novelGene_15099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGAAACCTGGGC	NA	False	NA	NA	False	NA	NA	NA	60581082	60581260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_60581100_60581300
ES.18203.1	chr19	-	6407	10	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	-3	718	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	68.7433947444237	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGTGTAAACATAGCTG	6413	False	NA	NA	False	ATTAAA	-14	NA	60569396	60512415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60512714_60512749_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.11	chr19	-	5605	9	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	77	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	94.8762351698253	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTAAACTTGCTTTTTA	6493	False	NA	-35	True	AATAAA	-13	NA	60569316	60513169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60517526_60517902_60517945_60522569_60522713_60525851_60525936_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.12	chr19	-	3698	9	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	84	693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.6992950447252	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAATGCTCATTTTAAA	6500	False	NA	NA	False	AATAAA	-17	NA	60569309	60515072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60517526_60517902_60517947_60522574_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.13	chr19	-	3421	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	35	-2151	17	438	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTCCTGAAAGTA	6433	False	NA	-4	True	AATAAA	-16	NA	60569376	60515327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.14	chr19	-	3555	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	43	2194	-9	438	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTCCTGAAAGTA	6389	False	NA	-4	True	AATAAA	-16	NA	60569420	60515327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.17	chr19	-	4711	9	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	10	435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.9099401659335	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGTATTTCCTGAAA	6426	False	NA	-7	True	AATAAA	-13	NA	60569383	60515330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60517526_60517902_60517947_60522573_60523909_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.18	chr19	-	3391	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	-100	2501	-100	131	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTGTGTTAGTAAATTA	6246	False	NA	1	True	AATAAA	-18	NA	60569563	60515634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.19	chr19	-	3122	8	NIC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	1	129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	71.076848321707	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTGTGTTAGTAAAT	6417	False	NA	-1	True	AATAAA	-16	NA	60569392	60515636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60551599_60551703_60552605_60552733_60568765
ES.18203.2	chr19	-	5912	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	-121	1	-121	-1	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTTTGATACCTGG	6225	False	NA	0	True	ATTAAA	-27	NA	60569584	60513134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.20	chr19	-	3154	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	-7	-1842	-7	129	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTTGTGTTAGTAAAT	6391	False	NA	-1	True	AATAAA	-16	NA	60569418	60515636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.24	chr19	-	3137	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	26	2629	-26	3	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTAGTGGTTCCGTGT	6372	False	NA	NA	False	AGTAAA	-24	NA	60569437	60515762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.27	chr19	-	2690	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	-72	3174	-72	-542	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGGAAAAGTATTTTCC	6274	False	NA	NA	False	AATAAA	-15	NA	60569535	60516307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.28	chr19	-	1790	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	107	3895	37	450	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCTGTTTTAAATTC	6453	False	NA	NA	False	AATACA	-20	NA	60569356	60517028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.3	chr19	-	8054	2	ISM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	47888	11	4412	-11	3prime_fragment	FALSE	canonical	3	221	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCAGGTGTTCCTGGGTT	NA	False	NA	-10	True	AATAAA	-38	NA	60521575	60513144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_60517526_60517902
ES.18203.30	chr19	-	1663	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	86	4043	16	302	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTTTGTTTTG	6432	False	NA	-20	True	AATACA	-11	NA	60569377	60517176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.4	chr19	-	5661	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	-23	-4333	-23	-12	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCAGGTGTTCCTGGGT	6375	False	NA	-11	True	AATAAA	-37	NA	60569434	60513145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18203.6	chr19	-	5773	10	NNC	ENSMUSG00000033417.17	novel	5792	9	NA	NA	24	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.4812208728116	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTAAGTTTTGTG	6440	False	NA	-26	True	AATAAA	-22	NA	60569369	60513160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60529117_60529220_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ES.18204.1	chr19	-	508	1	Intergenic	novelGene_15100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	60735744	60735236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60735200_60735700
ES.18204.2	chr19	-	158	1	Intergenic	novelGene_15101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	60735746	60735588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60735600_60735700
ES.18205.1	chr19	+	3523	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-122	527	-122	-527	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGTTTTTCTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	60744302	60747825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744300_60747800
ES.18205.2	chr19	+	3980	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-53	1	-53	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAATGTGTTTTATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	60744371	60748351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744400_60748400
ES.18205.3	chr19	+	2079	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	-1	1850	-1	-1850	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTCTTGGTGGTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	60744423	60746502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744400_60746500
ES.18205.4	chr19	+	1310	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	49	2569	49	-2569	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTCTCATCTTGGAT	NA	False	NA	NA	False	NA	NA	NA	60744473	60745783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744500_60745800
ES.18205.5	chr19	+	2492	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	75	1361	75	-1361	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATACTACTTGTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	60744499	60746991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744500_60747000
ES.18205.6	chr19	+	1412	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	148	2368	148	-2368	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGAGGGTGTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	60744572	60745984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60744600_60746000
ES.18206.1	chr19	+	9909	5	Antisense	novelGene_ENSMUSG00002075125.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	5728	False	NA	NA	False	NA	NA	NA	60762107	60775503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_60764296_60765064_60765238_60766378_60766585_60767794_60769956_60770322
ES.18206.2	chr19	+	2682	4	Antisense	novelGene_ENSMUSG00002075125.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATGGATAAGAGCAGA	5732	False	NA	NA	False	TTTAAA	-13	NA	60762111	60767062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_60763827_60764185_60764296_60765064_60765238_60766378
ES.18206.3	chr19	+	4951	1	Antisense	novelGene_ENSMUSG00002075125.1_AS_novelGene_ENSMUSG00000024991.9_AS_novelGene_ENSMUSG00000118735.1_AS_novelGene_ENSMUSG00002075991.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATGGATAAGAGCAGA	5732	False	NA	NA	False	TTTAAA	-13	NA	60762111	60767062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_60762100_60767100
ES.18206.4	chr19	+	10709	5	Antisense	novelGene_ENSMUSG00002075125.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGTAAATAAACCTTTA	5732	False	NA	NA	False	NA	NA	NA	60762111	60776299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_60763827_60764185_60764296_60765064_60765238_60766378_60766585_60767794
ES.18206.5	chr19	+	5513	3	Antisense	novelGene_ENSMUSG00000024991.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATGCATTTAACAG	3070	False	NA	NA	False	NA	NA	NA	60769495	60775521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_+_60769956_60770322_60770457_60770602
ES.18207.1	chr19	-	5651	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-64	-462	-49	462	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTTGTTATTGGTT	8690	False	NA	NA	False	AGTAAA	-16	NA	60779145	60749092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.15	chr19	-	4226	23	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	379.321700512031	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8758	False	NA	-31	True	AATAAA	-17	NA	60779077	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60749728_60750622_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.17	chr19	-	6397	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_16	314.573723473529	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8757	False	NA	-31	True	AATAAA	-17	NA	60779078	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.18	chr19	-	5616	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_16	314.402683671752	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8757	False	NA	-31	True	AATAAA	-17	NA	60779078	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.19	chr19	-	6095	13	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	4828	0	intron_retention	FALSE	canonical	3	964	junction_6	187.497925914454	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8140	False	NA	-31	True	AATAAA	-17	NA	60765800	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60760196_60760530_60760636_60761129_60761478_60761944_60762456_60763730_60763830_60764188_60764294_60765063
ES.18207.2	chr19	-	5304	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-52	-127	-37	127	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTGCGAAGTGCCC	8702	False	NA	96	True	AAAAAG	-16	NA	60779133	60749427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.20	chr19	-	5144	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	396.618518772266	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8730	False	NA	-31	True	AATAAA	-17	NA	60779105	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764283_60765057_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.21	chr19	-	6659	20	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_15	308.438889371062	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8747	False	NA	-31	True	AATAAA	-17	NA	60779088	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.24	chr19	-	6983	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-47	0	intron_retention	FALSE	canonical	0	0	junction_17	316.609459744967	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8692	False	NA	-31	True	AATAAA	-17	NA	60779143	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.27	chr19	-	3600	13	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1784	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	370.248302569445	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	9357	False	NA	-31	True	AATAAA	-17	NA	60762373	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758294_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338
ES.18207.3	chr19	-	5518	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-383	-10	-368	10	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATGGTGCTATATTC	8371	False	NA	-21	True	AATAAA	-27	NA	60779464	60749544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.30	chr19	-	5000	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	318	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	395.042602254962	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	9072	False	NA	-31	True	AATAAA	-17	NA	60778763	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778713
ES.18207.31	chr19	-	5121	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	398.010995871304	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8770	False	NA	-31	True	AATAAA	-17	NA	60779065	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760648_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.32	chr19	-	5093	23	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	389.633004376135	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8705	False	NA	-31	True	AATAAA	-17	NA	60779130	60749554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755305_60755385_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.33	chr19	-	5795	12	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-3222	-1	intron_retention	FALSE	canonical	3	964	junction_6	161.113634760641	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	9103	False	NA	-32	True	AATAAA	-16	NA	60763811	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338
ES.18207.34	chr19	-	5021	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	396.917611098324	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	8758	False	NA	-32	True	AATAAA	-16	NA	60779077	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.35	chr19	-	5141	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	309.066534016512	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	8686	False	NA	-32	True	AATAAA	-16	NA	60779149	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766535_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.42	chr19	-	4256	17	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	443.052056760828	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	8744	False	NA	-32	True	AATAAA	-16	NA	60779091	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60778906
ES.18207.44	chr19	-	5120	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	397.107866449875	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	8750	False	NA	-32	True	AATAAA	-16	NA	60779085	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758450_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.45	chr19	-	6835	20	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_15	407.904434519694	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGTGTTTTGTCAATG	8785	False	NA	-32	True	AATAAA	-16	NA	60779050	60749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767976_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.46	chr19	-	4206	11	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1433	-2	intron_retention	FALSE	canonical	3	964	junction_6	162.384235688074	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGTGTTTTGTCAAT	9708	False	NA	-33	True	AATAAA	-15	NA	60762022	60749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944
ES.18207.47	chr19	-	5104	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	396.858571311724	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGTGTTTTGTCAAT	8753	False	NA	-33	True	AATAAA	-15	NA	60779082	60749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767976_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.48	chr19	-	6118	21	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_16	404.986330016212	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGTGTTTTGTCAAT	8734	False	NA	-33	True	AATAAA	-15	NA	60779101	60749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767976_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.5	chr19	-	5171	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	396.618518772266	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTGTCAATGGTGC	8704	False	NA	-28	True	AATAAA	-20	NA	60779131	60749551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765070_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.50	chr19	-	5148	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	395.80225943194	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGTGTTTTGTCAAT	8704	False	NA	-33	True	AATAAA	-15	NA	60779131	60749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769944_60770335_60770460_60770605_60770797_60778906
ES.18207.51	chr19	-	4938	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	407.094150658051	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGTGTTTTGTCAAT	8753	False	NA	-33	True	AATAAA	-15	NA	60779082	60749556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.57	chr19	-	6606	20	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_15	322.573138005757	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTAGTGTTTTGTCAA	8753	False	NA	-34	True	AATAAA	-14	NA	60779082	60749557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.58	chr19	-	1749	5	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	5533	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	625.228358281996	1730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTAGTGTTTTGTCAA	9144	False	NA	-34	True	AATAAA	-14	NA	60755056	60749557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60754919_60755041
ES.18207.61	chr19	-	5188	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	397.107866449875	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTAGTGTTTTGTCAA	8697	False	NA	-34	True	AATAAA	-14	NA	60779138	60749557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758467_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.63	chr19	-	4951	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	404.967193115689	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTAGTGTTTTGTCA	8760	False	NA	-35	True	AATAAA	-13	NA	60779075	60749558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60770322_60770460_60770605_60770797_60778906
ES.18207.64	chr19	-	5101	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	395.93841569737	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTAGTGTTTTGTCA	8763	False	NA	-35	True	AATAAA	-13	NA	60779072	60749558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763741_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.66	chr19	-	1636	3	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	5564	-6	combination_of_known_splicesites	FALSE	canonical	1	16	junction_2	739	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTTAGTGTTTTGT	9175	False	NA	-37	True	AATAAA	-11	NA	60755025	60749560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60754771
ES.18207.67	chr19	-	5866	21	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1	-7	intron_retention	FALSE	canonical	0	0	junction_16	398.938641898726	1739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTGTTAGTGTTTTG	8753	False	NA	-38	True	AATAAA	-10	NA	60779082	60749561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767976_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.69	chr19	-	5165	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	465.496521295131	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGGTGTTAGTGTTTT	8720	False	NA	-39	True	AATAAA	-9	NA	60779115	60749562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756114_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761942_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.70	chr19	-	7932	19	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-31	-10	intron_retention	FALSE	canonical	0	0	junction_15	326.102914907412	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAATTGGTGTTAGTGTT	8708	False	NA	-41	True	AATAAA	-7	NA	60779127	60749564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.72	chr19	-	4896	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	3	226	3	-226	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTTTGGAGGAATTG	8757	False	NA	NA	False	TATAAA	-1	NA	60779078	60749780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.73	chr19	-	4485	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-7	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	395.93841569737	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATCTTTTTGTTTTGTTT	8747	False	NA	-2	True	NA	NA	NA	60779088	60750208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762463_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.75	chr19	-	4681	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-215	659	-200	63	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGATCTTTTTGTTT	8539	False	NA	-7	True	NA	NA	NA	60779296	60750213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.76	chr19	-	5234	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-2	62	intron_retention	FALSE	canonical	0	0	junction_16	309.803421543404	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTGATCTTTTTGTT	8752	False	NA	-8	True	NA	NA	NA	60779083	60750214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.79	chr19	-	4347	22	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	2	55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	395.042602254962	1731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTATACAATTGATCT	8756	False	NA	-15	True	NA	NA	NA	60779079	60750221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60779015
ES.18207.8	chr19	-	5990	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-82	1	intron_retention	FALSE	canonical	0	0	junction_16	309.803421543404	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTTTTGTCAATGGT	8657	False	NA	-30	True	AATAAA	-18	NA	60779178	60749553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.84	chr19	-	4396	23	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-1	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	389.633004376135	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTATCTTGGTATACAA	8753	False	NA	-22	True	NA	NA	NA	60779082	60750228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60750629_60750684_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.85	chr19	-	4225	7	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	1016	46	intron_retention	FALSE	canonical	3	964	junction_6	211.427489540347	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTTATCTTGGTATAC	9332	False	NA	-24	True	NA	NA	NA	60759573	60750230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60751703_60752469_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452
ES.18207.89	chr19	-	9537	18	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	-29	42	intron_retention	FALSE	canonical	3	964	junction_6	166.370641374669	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACACCTTATCTTGGT	8710	False	NA	-28	True	NA	NA	NA	60779125	60750234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60763830_60764188_60764294_60765063_60765236_60766376_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.90	chr19	-	2551	16	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	-15	8812	0	857	5prime_fragment	FALSE	canonical	0	0	junction_11	338.891618203946	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTTATTACAGAGAAAAG	8739	False	NA	4	True	NA	NA	NA	60779096	60758366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.91	chr19	-	2220	11	FSM	ENSMUSG00000024991.9	ENSMUST00000235706.2	2282	11	14	48	-1	-48	multi-exon	FALSE	canonical	0	0	junction_6	403.570130212829	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAAGAGAAAGAAGAACA	8753	False	NA	-96	True	NA	NA	NA	60779082	60761480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.92	chr19	-	1637	11	FSM	ENSMUSG00000024991.9	ENSMUST00000235706.2	2282	11	-32	677	-32	-677	multi-exon	FALSE	canonical	0	0	junction_6	403.570130212829	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTCTGAGTTTTGGATC	8707	False	NA	NA	False	TTTAAA	-23	NA	60779128	60762109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ES.18207.93	chr19	-	7419	4	NIC	ENSMUSG00000024991.9	novel	2282	11	NA	NA	-42	-677	intron_retention	FALSE	canonical	3	1327	junction_2	66.3525935187666	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTCTGAGTTTTGGATC	8697	False	NA	NA	False	TTTAAA	-23	NA	60779138	60762109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60763830_60764188_60765236_60766376_60770797_60778906
ES.18208.1	chr19	+	2465	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-60	-98	-34	98	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGTAAGTAGTAAGGCA	NA	False	NA	NA	False	GATAAA	-6	NA	60799988	60824763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.10	chr19	+	2041	7	NIC	ENSMUSG00000024993.16	novel	2267	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	152.254629559243	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800037	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.11	chr19	+	1343	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	9	915	4	199	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCTGCCTCAAAGTTT	NA	False	NA	NA	False	CATAAA	-18	NA	60800037	60823750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.12	chr19	+	3878	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-6	1545	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	60800042	60826210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.13	chr19	+	2208	8	NNC	ENSMUSG00000024993.16	novel	2267	8	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_3	169.610237465376	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800042	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_60800112_60803029_60803247_60809644_60809794_60810777_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.14	chr19	+	2220	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	145.434745869488	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800043	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.15	chr19	+	2227	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	124.536528531895	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800048	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803049_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.16	chr19	+	2222	8	NNC	ENSMUSG00000024993.16	novel	2267	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	169.855160387326	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGAACTACTTGATG	NA	False	NA	NA	False	ATTAAA	-11	NA	60800050	60824663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819245_60819333_60821021_60821117_60823263
ES.18208.17	chr19	+	2340	9	NNC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.158874604966	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800051	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_60800112_60803029_60803263_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.18	chr19	+	2112	7	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	165.643861609445	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800051	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803049_60803247_60809644_60809794_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.19	chr19	+	1406	9	NNC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	4	199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	148.14751938524	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCTGCCTCAAAGTTT	NA	False	NA	NA	False	CATAAA	-18	NA	60800052	60823750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_60800112_60803029_60803247_60805968_60806045_60809642_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.20	chr19	+	1969	6	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	9594	0	9165	0	3prime_fragment	FALSE	canonical	3	363	junction_4	24.2520102259586	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60809642	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.3	chr19	+	3278	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	273	junction_1	50.8342645169534	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800016	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.4	chr19	+	2357	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800018	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.5	chr19	+	2276	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	-9	0	-3	0	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800019	60824665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.7	chr19	+	1805	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	-2	-539	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAATACCTTTACT	NA	False	NA	NA	False	TTTAAA	-14	NA	60800031	60824126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18208.9	chr19	+	2230	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	-13	90	2	-90	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCCTCTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-9	NA	60800035	60824575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ES.18209.1	chr19	+	178	1	Intergenic	novelGene_15103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTTATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	60856373	60856551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_60856400_60856600
ES.1821.1	chr1	+	1836	1	ISM	ENSMUSG00000052428.11	ENSMUST00000097473.10	3966	8	23407	0	18006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCCCTCTTCCATG	NA	False	NA	NA	False	AATAAA	-12	NA	167159711	167161547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167159700_167161500
ES.18210.1	chr19	-	151	2	Intergenic	novelGene_15102	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTAATT	9968	False	NA	NA	False	NA	NA	NA	60864598	60783289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60783367_60864524
ES.18210.10	chr19	-	1456	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	-4	26	-4	-26	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAATATTTGCGTTTTT	1443	False	NA	-27	True	AATAAA	-8	NA	60862998	60852514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ES.18210.11	chr19	-	1258	6	NIC	ENSMUSG00000024997.8	novel	1478	7	NA	NA	77	-39	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	300.590352473262	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAACATTAAAA	1524	False	NA	-40	True	NA	NA	NA	60862917	60852527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60853158_60853603_60853770_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ES.18210.12	chr19	-	1332	6	NNC	ENSMUSG00000024997.8	novel	1478	7	NA	NA	-4	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	306.918230152593	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAACATTAAAA	1443	False	NA	-40	True	NA	NA	NA	60862998	60852527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60861534_60861702_60862869
ES.18210.14	chr19	-	866	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	64	548	64	-548	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTTGAAGATTATTTA	1511	False	NA	NA	False	AAAAAG	-22	NA	60862930	60853036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ES.18210.15	chr19	-	215	1	Intergenic	novelGene_15104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCACACTTCAGAGTTT	9985	False	NA	NA	False	NA	NA	NA	60864581	60864366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60864400_60864600
ES.18210.2	chr19	-	1736	2	Antisense	novelGene_ENSMUSG00000024993.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAT	8476	False	NA	NA	False	AATAAA	-12	NA	60803744	60801837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr19_-_60801912_60802082
ES.18210.3	chr19	-	1209	13	FSM	ENSMUSG00000063698.10	ENSMUST00000124921.2	1218	13	12	-3	12	3	multi-exon	FALSE	canonical	1	1	junction_8	9.49853789918334	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATCATCAAAAGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	60849850	60827192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ES.18210.4	chr19	-	1169	13	NIC	ENSMUSG00000063698.10	novel	1309	14	NA	NA	12	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	9.58695583708521	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATCATCAAAAGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	60849850	60827192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ES.18210.5	chr19	-	3076	15	NNC	ENSMUSG00000063698.10	novel	2923	15	NA	NA	-20	3	intron_retention	FALSE	canonical	0	0	junction_4	12.5152967628109	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATCATCAAAAGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	60849885	60827192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839476_60839793_60839895_60840449_60840529_60841904_60842027_60842124_60842191_60842301_60842359_60842444_60842552_60844264_60844291_60845370_60845566_60845647_60847177_60848466_60848533_60849736
ES.18210.6	chr19	-	3287	3	ISM	ENSMUSG00000063698.10	ENSMUST00000124921.2	1218	13	14335	5	14335	-5	3prime_fragment	FALSE	canonical	3	25	junction_2	6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTGAAAGAAATCATC	NA	False	NA	NA	False	AATAAA	-15	NA	60835527	60827200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_60827489_60830556_60830675_60832646
ES.18210.7	chr19	-	1152	13	NIC	ENSMUSG00000063698.10	novel	1309	14	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	6.73094016876956	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTGAAAGAAATCATC	NA	False	NA	NA	False	AATAAA	-15	NA	60849850	60827200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60848466_60848533_60849736
ES.18210.8	chr19	-	1223	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	69	17	14	-7	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATACTTGAAAGAAATCA	NA	False	NA	NA	False	AATAAA	-13	NA	60849848	60827202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ES.18210.9	chr19	-	1496	7	NNC	ENSMUSG00000024997.8	novel	1478	7	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	279.446725195022	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGGCACCGTTTCTC	1456	False	NA	-2	True	AATAAA	-33	NA	60862985	60852489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_60853186_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ES.18211.1	chr19	+	2770	17	NNC	ENSMUSG00000003228.10	novel	6580	16	NA	NA	-187	-3416	intron_retention	FALSE	canonical	0	0	junction_1	1.77548408891772	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGACCTGATTACATCTA	NA	False	NA	NA	False	ATTAAA	-28	NA	60878645	61080990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_+_60879070_60976139_60976236_61020189_61020303_61034514_61034593_61046379_61046445_61056985_61057087_61057741_61057835_61060871_61060936_61061826_61061968_61065075_61065267_61067774_61067813_61069291_61069382_61071498_61071708_61074509_61074648_61078348_61078487_61078945_61079078_61080331
ES.18211.2	chr19	+	2364	16	FSM	ENSMUSG00000003228.10	ENSMUST00000003313.10	6580	16	590	3626	-56	-3626	multi-exon	FALSE	canonical	0	0	junction_1	1.76886655485621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTCTCTGTTTACAT	NA	False	NA	NA	False	TTTAAA	-20	NA	60878776	61080780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60879070_60976139_60976236_61020189_61020303_61034514_61034593_61056985_61057087_61057741_61057835_61060871_61060936_61061826_61061968_61065075_61065267_61067774_61067813_61069291_61069382_61071498_61071708_61074509_61074648_61078348_61078487_61078945_61079078_61080331
ES.18211.3	chr19	+	5964	16	FSM	ENSMUSG00000003228.10	ENSMUST00000003313.10	6580	16	614	2	-32	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.76886655485621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGCAATTTCCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	60878800	61084404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_+_60879070_60976139_60976236_61020189_61020303_61034514_61034593_61056985_61057087_61057741_61057835_61060871_61060936_61061826_61061968_61065075_61065267_61067774_61067813_61069291_61069382_61071498_61071708_61074509_61074648_61078348_61078487_61078945_61079078_61080331
ES.18211.4	chr19	+	5597	14	ISM	ENSMUSG00000003228.10	ENSMUST00000003313.10	6580	16	142001	6	141287	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	1.81707874015657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACATTGCAATTTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	61020187	61084400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_+_61020303_61034514_61034593_61056985_61057087_61057741_61057835_61060871_61060936_61061826_61061968_61065075_61065267_61067774_61067813_61069291_61069382_61071498_61071708_61074509_61074648_61078348_61078487_61078945_61079078_61080331
ES.18212.1	chr19	-	8221	1	Intergenic	novelGene_15105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAATCGTGGTCTCGCTG	NA	False	NA	NA	False	NA	NA	NA	60922039	60913818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_60913800_60922000
ES.18213.1	chr19	-	201	1	Intergenic	novelGene_15106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGGAATAGATACACATT	NA	False	NA	NA	False	NA	NA	NA	61092681	61092480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61092500_61092700
ES.18214.1	chr19	-	4315	1	Intergenic	novelGene_15107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	61097485	61093170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61093200_61097500
ES.18215.1	chr19	-	4838	6	NNC	ENSMUSG00000074733.15	novel	524	6	NA	NA	7	82	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.918029108476	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGCCATTGTATTCCC	NA	False	NA	78	True	NA	NA	NA	61129248	61103339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61105727_61106664_61107080_61107148_61108891_61115444_61115506_61115875_61116003_61129142
ES.18215.10	chr19	-	565	4	NNC	ENSMUSG00000074733.15	novel	2568	4	NA	NA	-3693	-761	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	20.6074420214316	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAACCTTATGAGTGT	2916	False	NA	NA	False	NA	NA	NA	61119695	61108618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61108891_61115444_61115506_61115875_61116003_61119590
ES.18215.11	chr19	-	2812	1	Genic_Genomic	ENSMUSG00000074733.15	novel	NA	NA	NA	NA	2504	207	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAAGAAAGAA	9113	False	NA	NA	False	NA	NA	NA	61113498	61110686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61110700_61113500
ES.18215.12	chr19	-	1399	6	NNC	ENSMUSG00000074733.15	novel	4825	3	NA	NA	7	925	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.3316666015574	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGCTCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	61129248	61114515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61114706_61114745_61115506_61115875_61116003_61124801_61124861_61125284_61125442_61129142
ES.18215.2	chr19	-	5749	6	NNC	ENSMUSG00000074733.15	novel	2568	4	NA	NA	-10	1	intron_retention	FALSE	non_canonical	0	0	junction_1	20.8518584303654	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTGGTCATGGTGT	NA	False	NA	-3	True	NA	NA	NA	61129243	61103420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61107080_61107148_61108891_61115444_61115506_61115875_61116003_61124801_61124861_61129142
ES.18215.3	chr19	-	2573	4	FSM	ENSMUSG00000074733.15	ENSMUST00000205854.2	466	4	34	-2141	7	1	multi-exon	FALSE	canonical	2	4	junction_1	21.5148527508066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTGGTCATGGTGT	NA	False	NA	-3	True	NA	NA	NA	61129221	61103420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_61105727_61115444_61115506_61115875_61116003_61129142
ES.18215.4	chr19	-	4743	6	NNC	ENSMUSG00000074733.15	novel	524	6	NA	NA	-3681	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.0466149297221	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTGGTCATGGTGT	2928	False	NA	-3	True	NA	NA	NA	61119683	61103420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61105727_61106664_61107090_61107159_61108891_61115444_61115506_61115875_61116003_61119590
ES.18215.5	chr19	-	5692	5	NNC	ENSMUSG00000074733.15	novel	2753	5	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_1	20.5060966544099	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	-4	True	NA	NA	NA	61129246	61103421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61107080_61107148_61108891_61115444_61115506_61115875_61116003_61129142
ES.18215.6	chr19	-	2766	6	NNC	ENSMUSG00000074733.15	novel	676	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.442014830701	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTTGGTCATGG	NA	False	NA	-6	True	NA	NA	NA	61129234	61103423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61105727_61106664_61106789_61115444_61115506_61115875_61116003_61124801_61124861_61129142
ES.18215.7	chr19	-	5015	2	NNC	ENSMUSG00000074733.15	novel	2568	4	NA	NA	-476	-3	intron_retention	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTTGGTCATG	NA	False	NA	-7	True	NA	NA	NA	61108504	61103424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61107095_61107159
ES.18215.8	chr19	-	2528	5	NNC	ENSMUSG00000074733.15	novel	2568	4	NA	NA	6	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.5060966544099	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTGTTTTAAAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	61129249	61106588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61107080_61107148_61108891_61115444_61115506_61115875_61116003_61129142
ES.18215.9	chr19	-	536	4	FSM	ENSMUSG00000074733.15	ENSMUST00000180544.3	2568	4	-13	2045	-5	-756	multi-exon	FALSE	canonical	3	24	junction_1	12.675435561221	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTTATGAGTGTAATCA	NA	False	NA	NA	False	NA	NA	NA	61129213	61108613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_61108891_61115444_61115506_61115875_61116003_61129142
ES.18216.1	chr19	+	3642	5	Intergenic	novelGene_15108	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	5.62916512459885	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGTGCTCAGCAATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	61139971	61174494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140397_61167407_61167535_61167722_61167784_61171213_61172168_61172419
ES.18216.10	chr19	+	3648	5	Intergenic	novelGene_15114	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	5.62916512459885	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAATGAATGTTGATG	NA	False	NA	NA	False	ATTAAA	-5	NA	61140127	61174656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140397_61167407_61167535_61167722_61167784_61171213_61172168_61172419
ES.18216.11	chr19	+	3966	5	Intergenic	novelGene_15115	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	6.83282518435822	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGAAGTGTGCTCAG	NA	False	NA	NA	False	ATTAAA	-14	NA	61164211	61174488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61164967_61167407_61167535_61167722_61167784_61171213_61172168_61172419
ES.18216.2	chr19	+	3256	5	Intergenic	novelGene_15109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	6.59545297913646	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAGTGTGCTCAGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	61139973	61174490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140017_61167407_61167535_61167722_61167784_61171213_61172168_61172419
ES.18216.3	chr19	+	2742	3	Genic_Genomic	ENSMUSG00000118252.2	novel	801	1	NA	NA	-15703	7290	multi-exon	FALSE	canonical	0	0	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAGGTCTGCTAATCAT	NA	False	NA	NA	False	GATAAA	-12	NA	61139983	61163777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_61140397_61154982_61157209_61163674
ES.18216.4	chr19	+	3248	5	Intergenic	novelGene_15110	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	6.59545297913646	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGTGTGCTCAGCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	61139983	61174492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140017_61167407_61167535_61167722_61167784_61171213_61172200_61172451
ES.18216.5	chr19	+	2618	2	Genic_Genomic	ENSMUSG00000118252.2	novel	801	1	NA	NA	-15683	720	multi-exon	FALSE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTATTAGTCAGGGTT	NA	False	NA	NA	False	AATAAA	-35	NA	61140003	61157207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_+_61140397_61154982
ES.18216.6	chr19	+	3589	5	Intergenic	novelGene_15111	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	6.26498204307083	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAGTGTGCTCAGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	61140033	61174490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140397_61167407_61167535_61167722_61167797_61171213_61172168_61172419
ES.18216.7	chr19	+	3575	5	Intergenic	novelGene_15112	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	5.62916512459885	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGTGTGCTCAGCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	61140036	61174492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140397_61167407_61167535_61167722_61167784_61171213_61172209_61172460
ES.18216.9	chr19	+	3583	5	Intergenic	novelGene_15113	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	6.26498204307083	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCTCAGCAATTTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	61140045	61174496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61140397_61167407_61167535_61167722_61167797_61171213_61172181_61172432
ES.18217.1	chr19	-	170	1	Intergenic	novelGene_15116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	61170584	61170414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61170400_61170600
ES.18218.1	chr19	+	2269	1	Intergenic	novelGene_15117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	7893	False	NA	NA	False	NA	NA	NA	61174869	61177138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61174900_61177100
ES.18219.1	chr19	+	198	1	Intergenic	novelGene_15118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAAAAATTATGGT	5644	False	NA	NA	False	NA	NA	NA	61181754	61181952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61181800_61182000
ES.1822.1	chr1	+	180	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAACAAACAC	NA	False	NA	NA	False	NA	NA	NA	167166054	167166234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167166100_167166200
ES.18220.1	chr19	-	3074	8	NNC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	65	1252	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	38.6924028824306	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGAAAGGTTTGGTGC	9936	False	NA	NA	False	NA	NA	NA	61215056	61211142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962
ES.18220.10	chr19	-	1393	5	NNC	ENSMUSG00000059326.8	novel	1326	10	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_3	60.7741721457397	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGTTTTCTTTTGC	9865	False	NA	-1	True	NA	NA	NA	61215127	61212838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214638_61214823_61214962
ES.18220.11	chr19	-	2092	11	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-79	0	intron_retention	FALSE	canonical	3	24	junction_5	46.8517875859609	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9729	False	NA	-2	True	NA	NA	NA	61216946	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214260_61214365_61214494_61214638_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.12	chr19	-	1518	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	16	0	intron_retention	FALSE	canonical	3	89	junction_5	19.9728983041187	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9887	False	NA	-2	True	NA	NA	NA	61215105	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214652_61214823_61214962
ES.18220.13	chr19	-	1971	11	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-21	0	intron_retention	FALSE	canonical	3	18	junction_3	44.0004545431067	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9787	False	NA	-2	True	NA	NA	NA	61216888	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61214021_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.15	chr19	-	1659	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-160	0	intron_retention	FALSE	canonical	3	24	junction_4	49.9988888765429	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9711	False	NA	-2	True	NA	NA	NA	61215281	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214494_61214638_61214823_61214962_61215093_61215243
ES.18220.16	chr19	-	1504	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	16	0	intron_retention	FALSE	canonical	3	18	junction_3	53.3791469895626	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9887	False	NA	-2	True	NA	NA	NA	61215105	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61214021_61214260_61214365_61214494_61214638_61214823_61214962
ES.18220.17	chr19	-	2873	4	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	33	junction_3	13.2748718344933	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9800	False	NA	-2	True	NA	NA	NA	61216875	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.18	chr19	-	1963	8	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	34	junction_6	39.5381500088516	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9955	False	NA	-2	True	NA	NA	NA	61215665	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467
ES.18220.19	chr19	-	1697	6	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	29	0	intron_retention	FALSE	canonical	3	96	junction_4	17.8370401132026	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9900	False	NA	-2	True	NA	NA	NA	61215092	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214260_61214365_61214823_61214962
ES.18220.2	chr19	-	2591	4	NNC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	15	273	intron_retention	FALSE	canonical	3	24	junction_2	55.7753430190159	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCACATAGACAGTACC	9886	False	NA	NA	False	NA	NA	NA	61215106	61212121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213653_61213761_61214494_61214638_61214823_61214962
ES.18220.20	chr19	-	1382	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	49.0399497008986	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9887	False	NA	-2	True	NA	NA	NA	61215105	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214365_61214494_61214652_61214823_61214962
ES.18220.22	chr19	-	2027	3	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	16	0	intron_retention	FALSE	canonical	3	136	junction_1	5.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9887	False	NA	-2	True	NA	NA	NA	61215105	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61214823_61214962
ES.18220.24	chr19	-	1870	9	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	22	0	intron_retention	FALSE	canonical	3	24	junction_6	39.1878488820195	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9968	False	NA	-2	True	NA	NA	NA	61215652	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962_61215365_61215467
ES.18220.26	chr19	-	1955	11	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	18	junction_3	46.7107054110725	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9811	False	NA	-2	True	NA	NA	NA	61216864	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61214021_61214091_61214229_61214260_61214365_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.27	chr19	-	2188	8	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_7	52.1015491955031	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9799	False	NA	-2	True	NA	NA	NA	61216876	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213859_61213960_61214260_61214365_61214494_61214638_61214823_61214962_61215365_61215467_61215623_61216776
ES.18220.28	chr19	-	2497	4	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	168	-9	28	0	intron_retention	FALSE	canonical	3	120	junction_3	7.78888096369861	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9974	False	NA	-2	True	NA	NA	NA	61215646	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960
ES.18220.29	chr19	-	1999	3	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	24	junction_1	61.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9869	False	NA	-2	True	NA	NA	NA	61215123	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61214494_61214638_61214823_61214962
ES.18220.3	chr19	-	2969	1	Genic_Genomic	ENSMUSG00000059326.8	novel	NA	NA	NA	NA	5	247	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	9876	False	NA	NA	False	NA	NA	NA	61215116	61212147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61212100_61215100
ES.18220.30	chr19	-	1534	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	24	junction_5	41.3709506242672	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9885	False	NA	-2	True	NA	NA	NA	61215107	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214638_61214823_61214962
ES.18220.31	chr19	-	2107	11	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-88	0	intron_retention	FALSE	canonical	3	33	junction_10	42.7903026397337	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9720	False	NA	-2	True	NA	NA	NA	61216955	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.32	chr19	-	1670	5	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	108	0	intron_retention	FALSE	canonical	3	89	junction_3	24.9299017246358	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9979	False	NA	-2	True	NA	NA	NA	61215013	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61214260_61214365_61214494_61214652_61214823_61214962
ES.18220.33	chr19	-	1934	11	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	33	junction_10	41.70803279945	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9836	False	NA	-2	True	NA	NA	NA	61216839	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.34	chr19	-	1537	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_6	52.9037385782475	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9885	False	NA	-2	True	NA	NA	NA	61215107	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214955
ES.18220.35	chr19	-	1397	6	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_2	59.6710985318688	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9864	False	NA	-2	True	NA	NA	NA	61215128	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61214021_61214091_61214229_61214494_61214638_61214823_61214962
ES.18220.36	chr19	-	1788	9	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_2	47.2769433762379	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9947	False	NA	-2	True	NA	NA	NA	61215673	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213859_61214021_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962_61215093_61215243_61215365_61215467
ES.18220.37	chr19	-	2091	4	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-207	0	intron_retention	FALSE	canonical	3	89	junction_2	25.152865973218	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9664	False	NA	-2	True	NA	NA	NA	61215328	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61214494_61214652_61214823_61214962
ES.18220.38	chr19	-	1550	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	24	junction_5	41.5317816724601	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9865	False	NA	-2	True	NA	NA	NA	61215127	61212839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962
ES.18220.4	chr19	-	2928	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	33	junction_6	47.772609539591	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGAGGTAGTGCACCT	9800	False	NA	NA	False	NA	NA	NA	61216875	61212394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.40	chr19	-	1610	6	NIC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	25	-1	intron_retention	FALSE	canonical	3	89	junction_4	21.844907873461	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTTTGTTTTCTTTT	9896	False	NA	-3	True	NA	NA	NA	61215096	61212840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214494_61214652_61214823_61214962
ES.18220.41	chr19	-	3004	4	NIC	ENSMUSG00000059326.8	novel	1326	10	NA	NA	-319	-1	intron_retention	FALSE	canonical	3	40	junction_3	40.7921561087423	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTTTGTTTTCTTTT	9956	False	NA	-3	True	NA	NA	NA	61216133	61212840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61215365_61215467_61215623_61215709
ES.18220.42	chr19	-	1639	6	NIC	ENSMUSG00000059326.8	novel	1326	10	NA	NA	52	-2	intron_retention	FALSE	canonical	3	106	junction_4	14.4692777981487	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTTTGTTTTCTTT	9923	False	NA	-4	True	NA	NA	NA	61215069	61212841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214823_61214962
ES.18220.43	chr19	-	1981	7	NIC	ENSMUSG00000059326.8	novel	1326	10	NA	NA	148	-2	intron_retention	FALSE	canonical	3	34	junction_5	42.2005792482626	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTTTTGTTTTCTTT	9901	False	NA	-4	True	NA	NA	NA	61215526	61212841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214823_61214962_61215093_61215243_61215365_61215467
ES.18220.44	chr19	-	1559	7	NIC	ENSMUSG00000059326.8	novel	1771	11	NA	NA	5	-3	intron_retention	FALSE	canonical	3	89	junction_5	21.6288130870734	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGCTTTTGTTTTCTT	9876	False	NA	-5	True	NA	NA	NA	61215116	61212842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214260_61214365_61214494_61214652_61214823_61214962
ES.18220.5	chr19	-	3124	3	NIC	ENSMUSG00000059326.8	novel	654	6	NA	NA	4	-102	intron_retention	FALSE	canonical	3	40	junction_2	12	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTCTAATTACATAGA	9810	False	NA	NA	False	AATAAA	-14	NA	61215810	61212496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr19_-_61215365_61215467_61215623_61215709
ES.18220.6	chr19	-	2996	1	Genic_Genomic	ENSMUSG00000059326.8	novel	NA	NA	NA	NA	156	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATAAAAGAAAAG	9909	False	NA	NA	False	NA	NA	NA	61215518	61212522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61212500_61215500
ES.18220.7	chr19	-	1930	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	-79	-2	-68	2	multi-exon	FALSE	canonical	3	33	junction_11	40.804310256849	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTTTGCC	9740	False	NA	0	True	NA	NA	NA	61216935	61212837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ES.18220.8	chr19	-	1787	11	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	49.7317805834458	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTTTGCC	9803	False	NA	0	True	NA	NA	NA	61216872	61212837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61216776
ES.18221.1	chr19	+	188	1	Intergenic	novelGene_15119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATTTTAATTCAT	NA	False	NA	NA	False	AATACA	-6	NA	61258653	61258841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_+_61258700_61258800
ES.18222.1	chr19	-	3698	1	Intergenic	novelGene_15120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGAATCTTCTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	61279951	61276253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61276300_61280000
ES.18222.2	chr19	-	1759	1	Intergenic	novelGene_15121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAATAATTTAA	NA	False	NA	NA	False	NA	NA	NA	61280080	61278321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61278300_61280100
ES.18223.1	chr19	-	2691	4	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16482	1746	multi-exon	FALSE	canonical	3	25	junction_1	10.4243305140746	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACCTGATTCTTTTTG	NA	False	NA	NA	False	ATTAAA	-8	NA	61301989	61283593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61301845
ES.18223.10	chr19	-	1278	1	Intergenic	novelGene_15123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	61290950	61289672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61289700_61291000
ES.18223.11	chr19	-	2750	4	Genic_Genomic	ENSMUSG00000118197.2	novel	243	1	NA	NA	-8259	2166	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGGCATTGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	61301977	61291309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61291734_61292476_61294590_61296885_61296967_61301845
ES.18223.12	chr19	-	3379	1	FSM	ENSMUSG00000118197.2	ENSMUST00000237261.2	243	1	-970	-2166	-970	2166	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGGCATTGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	61294688	61291309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_61291300_61294700
ES.18223.13	chr19	-	1472	2	Intergenic	novelGene_15124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61301942	61291333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61292709_61301845
ES.18223.14	chr19	-	7453	1	FSM	ENSMUSG00000118197.2	ENSMUST00000237261.2	243	1	-6080	-1130	-6080	1130	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAGGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	61299798	61292345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr19_-_61292300_61299800
ES.18223.15	chr19	-	1497	2	Genic_Genomic	ENSMUSG00000118197.2	novel	243	1	NA	NA	-8241	1130	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAGGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	61301959	61292345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61293729_61301845
ES.18223.2	chr19	-	2652	4	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16463	1746	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACCTGATTCTTTTTG	NA	False	NA	NA	False	ATTAAA	-8	NA	61301970	61283593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287295_61287423_61288602_61288644_61301845
ES.18223.3	chr19	-	2589	3	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16441	1746	multi-exon	FALSE	canonical	2	4	junction_1	19	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACCTGATTCTTTTTG	NA	False	NA	NA	False	ATTAAA	-8	NA	61301948	61283593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287295_61287423_61301845
ES.18223.4	chr19	-	2895	6	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16413	1746	multi-exon	FALSE	canonical	0	0	junction_4	18.8616012045637	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACCTGATTCTTTTTG	NA	False	NA	NA	False	ATTAAA	-8	NA	61301920	61283593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61288602_61288644_61292476_61292709_61301845
ES.18223.5	chr19	-	6715	5	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16423	1723	multi-exon	FALSE	canonical	1	1	junction_4	18.8812075884992	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61301930	61283616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61288602_61292709_61301845
ES.18223.6	chr19	-	2680	5	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16453	1723	multi-exon	FALSE	canonical	3	5	junction_4	17.8745629317195	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61301960	61283616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61288602_61288644_61301845
ES.18223.7	chr19	-	477	3	Intergenic	novelGene_15122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	4	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACAGTGTCAGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	61301997	61286918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr19_-_61287117_61287295_61287423_61301845
ES.18223.8	chr19	-	3137	4	Genic_Genomic	ENSMUSG00000118197.2	novel	243	1	NA	NA	-8180	3815	multi-exon	FALSE	non_canonical	0	0	junction_2	1.4142135623731	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCCTAAGAGACTTTG	NA	False	NA	NA	False	NA	NA	NA	61301898	61289660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr19_-_61289886_61291038_61293817_61296885_61296967_61301845
ES.18224.1	chr1_GL456210v1_random	-	582	4	Intergenic	novelGene_15125	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCTAATATTTAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	113809	111435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456210v1_random_-_111634_112470_112591_112852_113004_113696
ES.18225.1	chr1_GL456211v1_random	-	284	1	Intergenic	novelGene_15126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	1377	1093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456211v1_random_-_1100_1400
ES.18225.2	chr1_GL456211v1_random	-	175	2	Intergenic	novelGene_15127	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTGAACCGGAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	69470	1210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456211v1_random_-_1223_69307
ES.18225.3	chr1_GL456211v1_random	-	176	1	Intergenic	novelGene_15128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	69469	69293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456211v1_random_-_69300_69500
ES.18226.1	chr1_GL456211v1_random	+	150	1	Intergenic	novelGene_15129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	133100	133250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456211v1_random_+_133100_133200
ES.18227.1	chr1_GL456211v1_random	+	149	1	Intergenic	novelGene_15130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAAATCTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	218130	218279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456211v1_random_+_218100_218300
ES.18228.1	chr1_GL456221v1_random	+	175	1	Intergenic	novelGene_15131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGATCGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	174126	174301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_GL456221v1_random_+_174100_174300
ES.18229.1	chr1_MU069434v1_random	-	381	2	Intergenic	novelGene_15132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	94	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCCTGGTTTTTTAA	NA	False	NA	NA	False	AAGAAA	-14	NA	7711	7242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_MU069434v1_random_-_7461_7548
ES.1823.1	chr1	-	283	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTAAAGTATGA	NA	False	NA	NA	False	AATAAA	-19	NA	167173743	167173460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167173500_167173700
ES.1823.2	chr1	-	176	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAAACTTCA	NA	False	NA	NA	False	NA	NA	NA	167173744	167173568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167173600_167173700
ES.18230.1	chr1_MU069434v1_random	+	178	1	Intergenic	novelGene_15133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAGGCTGTTTCTTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	7937	8115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_MU069434v1_random_+_7900_8100
ES.18231.1	chr2	+	4255	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-106	0	-106	0	multi-exon	TRUE	canonical	3	29	junction_6	7.31785627135183	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	780	False	NA	NA	False	AATAAA	-20	NA	3119312	3228843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ES.18231.10	chr2	+	3489	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	-39	-1	-8	1	multi-exon	FALSE	canonical	2	5	junction_6	16.2241246981839	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGAGTCAGTTCTTCAA	878	False	NA	NA	False	AATAAA	-22	NA	3119410	3228290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
ES.18231.2	chr2	+	4022	7	NIC	ENSMUSG00000050530.15	novel	4149	8	NA	NA	-57	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	17.3877351409933	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATGTGTTTATTC	829	False	NA	NA	False	AATAAA	-13	NA	3119361	3228836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3221289_3221407_3224506_3224622_3225854
ES.18231.3	chr2	+	4097	7	NIC	ENSMUSG00000050530.15	novel	4149	8	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.285993045109	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	845	False	NA	NA	False	AATAAA	-20	NA	3119377	3228843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3119690_3179272_3179501_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ES.18231.4	chr2	+	4072	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	-69	-554	-38	0	multi-exon	FALSE	canonical	2	5	junction_6	16.2241246981839	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	848	False	NA	NA	False	AATAAA	-20	NA	3119380	3228843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
ES.18231.5	chr2	+	4040	9	NNC	ENSMUSG00000050530.15	novel	4149	8	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.0385278314439	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	848	False	NA	NA	False	AATAAA	-20	NA	3119380	3228843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3119405_3119551_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ES.18231.6	chr2	+	3787	5	NNC	ENSMUSG00000050530.15	novel	4149	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.3585462988472	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	852	False	NA	NA	False	AATAAA	-20	NA	3119384	3228843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198482_3225850
ES.18231.7	chr2	+	1717	7	NNC	ENSMUSG00000050530.15	novel	3449	7	NA	NA	-33	16441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	18.0593158477526	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGTGCTCTCTGGTTC	853	False	NA	NA	False	AGTAAA	-16	NA	3119385	3245284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3244645
ES.18231.8	chr2	+	3620	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	-24	553	-24	1	multi-exon	FALSE	canonical	3	29	junction_6	7.31785627135183	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGAGTCAGTTCTTCAA	862	False	NA	NA	False	AATAAA	-22	NA	3119394	3228290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ES.18232.1	chr2	-	3673	1	Intergenic	novelGene_15134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGGCCATTCTTGGTG	NA	False	NA	NA	False	AATAGA	-32	NA	3124154	3120481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_3120500_3124200
ES.18233.1	chr2	-	178	1	Intergenic	novelGene_15135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATAGCCATTTAA	NA	False	NA	NA	False	NA	NA	NA	3274210	3274032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_3274000_3274200
ES.18234.1	chr2	+	4709	15	NNC	ENSMUSG00000026643.17	novel	4461	14	NA	NA	-151	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.32600906652	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTGTTTTCTGTAC	836	False	NA	21	True	AATAAA	-21	NA	3285097	3329914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3285444_3290321_3290419_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.10	chr2	+	2593	12	FSM	ENSMUSG00000026643.17	ENSMUST00000102989.10	2162	12	-67	-364	-22	364	multi-exon	FALSE	canonical	3	6	junction_2	78.3416969921083	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTATAGACTGGGCCT	965	False	NA	NA	False	AATAAA	-14	NA	3285226	3328117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.11	chr2	+	4412	14	NNC	ENSMUSG00000026643.17	novel	4461	14	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	75.4594604904832	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTTTGAGTGTTTTC	966	False	NA	16	True	AATAAA	-16	NA	3285227	3329909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323736_3325889_3326036_3326300_3326439_3327107
ES.18234.12	chr2	+	2921	11	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-2	4565	-2	-1886	5prime_fragment	FALSE	canonical	3	230	junction_10	26.6045108957109	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAATCTCGTCTGGTTT	985	False	NA	NA	False	ACTAAA	-12	NA	3285246	3325349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607
ES.18234.13	chr2	+	2563	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-2	1900	-2	261	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGTTTTTACCTA	985	False	NA	NA	False	NA	NA	NA	3285246	3328014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.14	chr2	+	3838	14	NNC	ENSMUSG00000026643.17	novel	4461	14	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.2951292387799	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTGTTTTGAGTGT	1018	False	NA	12	True	AATAAA	-12	NA	3285279	3329905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327690
ES.18234.16	chr2	+	1511	12	NNC	ENSMUSG00000026643.17	novel	1676	13	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	107.748406059043	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAGTAGTTGTTAA	1056	False	NA	6	True	AATAAA	-15	NA	3285317	3327231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3285444_3305848_3305985_3306433_3306477_3313492_3313609_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.17	chr2	+	1911	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	69	2481	0	198	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAGAGTCACTGCTGCT	1056	False	NA	NA	False	AAGAAA	-11	NA	3285317	3327433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.18	chr2	+	4335	13	FSM	ENSMUSG00000026643.17	ENSMUST00000091504.5	1676	13	14	-2673	1	-6	multi-exon	FALSE	canonical	1	2	junction_3	77.5622957513651	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGTTTTGAGTGTTTT	1057	False	NA	15	True	AATAAA	-15	NA	3285318	3329908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.19	chr2	+	2620	11	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	21559	2679	21490	0	3prime_fragment	FALSE	canonical	3	230	junction_7	26.8432486856565	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTAGTTGTTAACAAT	NA	False	NA	10	True	AATAAA	-19	NA	3306807	3327235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.2	chr2	+	4516	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-54	-1	-54	1	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTGTTTTCTGTACT	933	False	NA	22	True	AATAAA	-22	NA	3285194	3329915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.20	chr2	+	6392	10	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	22892	8	22823	-8	3prime_fragment	FALSE	canonical	3	230	junction_6	28.2449602190865	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGTTTTGAGTGTT	NA	False	NA	13	True	AATAAA	-13	NA	3308140	3329906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.21	chr2	+	3046	10	ISM	ENSMUSG00000026643.17	ENSMUST00000091504.5	1676	13	23508	3	23495	-3	3prime_fragment	FALSE	canonical	3	230	junction_6	28.2449602190865	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAAGTAGTTGTTAAC	NA	False	NA	7	True	AATAAA	-16	NA	3308812	3327232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.22	chr2	+	3654	6	ISM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	30385	7	30316	-7	3prime_fragment	FALSE	canonical	3	230	junction_2	29.2205407205274	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	3315633	3329907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.23	chr2	+	3529	1	NIC	ENSMUSG00000026643.17	novel	4461	14	NA	NA	41059	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTGTTTTGAGTGT	NA	False	NA	12	True	AATAAA	-12	NA	3326376	3329905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3326400_3329900
ES.18234.3	chr2	+	5029	12	NIC	ENSMUSG00000026643.17	novel	4461	14	NA	NA	-39	-7	intron_retention	FALSE	canonical	3	230	junction_8	26.7155199886595	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	948	False	NA	14	True	AATAAA	-14	NA	3285209	3329907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3285444_3305848_3306477_3308019_3308070_3310503_3310649_3313492_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.4	chr2	+	4379	12	NNC	ENSMUSG00000026643.17	novel	2162	12	NA	NA	-39	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	79.7018203386175	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	948	False	NA	14	True	AATAAA	-14	NA	3285209	3329907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3285444_3305848_3305985_3310524_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.5	chr2	+	2739	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-36	1758	-36	403	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATACTTCCTGCCTTTA	951	False	NA	NA	False	ACTAAA	-45	NA	3285212	3328156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.6	chr2	+	4396	12	FSM	ENSMUSG00000026643.17	ENSMUST00000102989.10	2162	12	-78	-2156	-33	-5	multi-exon	TRUE	canonical	3	6	junction_2	78.3416969921083	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTTTGAGTGTTTTC	954	False	NA	16	True	AATAAA	-16	NA	3285215	3329909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.7	chr2	+	1818	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	-33	2676	-33	3	multi-exon	FALSE	canonical	3	230	junction_10	26.4695873268632	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTTGTTAACAATCAG	954	False	NA	13	True	AATAAA	-22	NA	3285215	3327238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18234.8	chr2	+	3726	1	Genic_Genomic	ENSMUSG00000026643.17	novel	NA	NA	NA	NA	-33	-19231	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	954	False	NA	NA	False	NA	NA	NA	3285215	3288941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_3285200_3288900
ES.18234.9	chr2	+	3499	5	NIC	ENSMUSG00000026643.17	novel	2162	12	NA	NA	-28	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	114.02713492849	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGTTTTGAGTGTT	959	False	NA	13	True	AATAAA	-13	NA	3285220	3329906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3285444_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ES.18235.1	chr2	-	3126	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	13	-2097	13	2097	multi-exon	FALSE	canonical	3	304	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGCTGACTCCACTC	2330	False	NA	NA	False	AATAAA	-14	NA	3333667	3327888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3330911_3333563
ES.18235.2	chr2	-	2114	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	12	-1084	12	1084	multi-exon	FALSE	canonical	3	304	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGGTTTTAACAGT	2329	False	NA	NA	False	AATAAA	-10	NA	3333668	3328901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3330911_3333563
ES.18235.3	chr2	-	1038	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	17	-13	17	13	multi-exon	FALSE	canonical	3	304	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGAGGTGCTTTTCTCT	2334	False	NA	-2	True	AATAAA	-31	NA	3333663	3329972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3330911_3333563
ES.18235.4	chr2	-	3702	1	Genic_Genomic	ENSMUSG00000049950.7	novel	NA	NA	NA	NA	1	8	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCATGGAGGTGCTTT	2318	False	NA	-7	True	AATAAA	-26	NA	3333679	3329977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_3330000_3333700
ES.18235.5	chr2	-	3191	2	NNC	ENSMUSG00000049950.7	novel	1042	2	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTAGGATCCTGCATG	2334	False	NA	-17	True	AATAAA	-16	NA	3333663	3329987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3330911_3331395
ES.18236.1	chr2	+	217	1	Intergenic	novelGene_15136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTTGGGAGGATTCA	1391	False	NA	NA	False	NA	NA	NA	3334551	3334768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3334600_3334800
ES.18237.1	chr2	+	151	1	ISM	ENSMUSG00000026644.8	ENSMUST00000115089.2	531	4	4675	0	4675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTGTGTATGGAT	5713	False	NA	NA	False	AATAAA	-16	NA	3341879	3342030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3341900_3342000
ES.18238.1	chr2	+	146	1	Intergenic	novelGene_15137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAATAATGA	NA	False	NA	NA	False	NA	NA	NA	3350357	3350503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3350400_3350500
ES.18239.1	chr2	+	157	1	Intergenic	novelGene_15138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	3362299	3362456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3362300_3362500
ES.1824.1	chr1	+	2449	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	-30	416	-30	-416	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGGCTATGTGACTC	NA	False	NA	22	True	AATAAA	-32	NA	167177529	167195685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.10	chr1	+	5409	10	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	41	-1	intron_retention	FALSE	canonical	3	593	junction_2	41.3533404386163	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTGCCGTCTTAAT	NA	False	NA	5	True	ATTAAA	-17	NA	167177600	167196100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167192219_167193343_167193457_167194973
ES.1824.12	chr1	+	4654	4	FSM	ENSMUSG00000026687.15	ENSMUST00000193091.2	600	4	-121	-3933	-45	3933	multi-exon	FALSE	canonical	3	593	junction_2	33.0689515339624	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	167177759	167187392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240
ES.1824.13	chr1	+	3620	10	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-43	-244	intron_retention	FALSE	canonical	3	19	junction_4	213.803013063572	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTTCTGTCCTTTC	NA	False	NA	18	True	AATAAA	-15	NA	167177761	167195857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184804_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.14	chr1	+	4868	9	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-43	-249	intron_retention	FALSE	canonical	3	637	junction_3	38.4770629726334	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	13	True	AATAAA	-10	NA	167177761	167195852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167182126_167183240_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.15	chr1	+	3110	10	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-40	-243	intron_retention	FALSE	canonical	3	593	junction_2	47.3085485449733	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTCTGTCCTTTCT	NA	False	NA	19	True	AATAAA	-16	NA	167177764	167195858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.16	chr1	+	3268	11	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-30	-249	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	271.028799207759	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	13	True	AATAAA	-10	NA	167177774	167195852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183765_167184098_167184804_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.17	chr1	+	1222	8	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	216	6655	-29	-5770	5prime_fragment	FALSE	canonical	3	593	junction_2	34.0198021566192	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGCATTTTAAGTATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	167177775	167189446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372
ES.1824.18	chr1	+	5912	8	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-17	-246	intron_retention	FALSE	canonical	3	593	junction_2	43.381553495391	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTTTTCTGTCCTT	NA	False	NA	16	True	AATAAA	-13	NA	167177787	167195855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184296_167184878_167185020_167188971_167192219_167193343_167193457_167194973
ES.1824.19	chr1	+	3831	10	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	19	junction_4	213.803013063572	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTGCCGTCTTAAT	NA	False	NA	5	True	ATTAAA	-17	NA	167177793	167196100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184804_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.2	chr1	+	2610	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	-16	241	-16	-241	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCTGTCCTTTCTTT	NA	False	NA	21	True	AATAAA	-18	NA	167177543	167195860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.20	chr1	+	3477	13	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-11	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	340.360215637623	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCTGTCCTTTCTTT	NA	False	NA	21	True	AATAAA	-18	NA	167177793	167195860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181485_167181621_167181786_167181872_167181995_167182126_167183240_167183765_167184098_167184804_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.22	chr1	+	3905	9	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	593	junction_2	47.656157786796	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTTTTGCCGTCTTAA	NA	False	NA	4	True	ATTAAA	-16	NA	167177793	167196099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.23	chr1	+	4506	5	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	-9	3896	intron_retention	FALSE	canonical	3	19	junction_4	268.98640764916	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167177795	167187355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184804_167184878
ES.1824.24	chr1	+	3377	10	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	13	-431	intron_retention	FALSE	canonical	3	19	junction_4	213.803013063572	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTATTCTTAGTATTTG	NA	False	NA	7	True	AATAAA	-17	NA	167177817	167195670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184804_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.25	chr1	+	2021	9	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	4435	243	4114	-243	3prime_fragment	FALSE	canonical	3	637	junction_3	36.7517006409227	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTCTGTCCTTTCT	NA	False	NA	19	True	AATAAA	-16	NA	167181994	167195858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.26	chr1	+	1886	8	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	5679	249	5358	-249	3prime_fragment	FALSE	canonical	3	637	junction_2	38.5910003254962	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	13	True	AATAAA	-10	NA	167183238	167195852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.28	chr1	+	3130	6	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	5420	-249	intron_retention	FALSE	canonical	3	666	junction_1	28.555910071297	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	13	True	AATAAA	-10	NA	167183300	167195852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.29	chr1	+	3339	2	ISM	ENSMUSG00000026687.15	ENSMUST00000191715.2	840	3	-346	-636	-346	-249	intron_retention	FALSE	canonical	3	700	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTTTTTCTGTC	NA	False	NA	13	True	AATAAA	-10	NA	167191388	167195852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167192219_167193343
ES.1824.3	chr1	+	3343	10	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	0	-246	intron_retention	FALSE	canonical	0	0	junction_1	219.528282156689	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTTTTCTGTCCTT	NA	False	NA	16	True	AATAAA	-13	NA	167177559	167195855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167178017_167180088_167180235_167181995_167182126_167183240_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.30	chr1	+	3639	1	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	727	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTTTGCCGTCTTAAT	NA	False	NA	5	True	ATTAAA	-17	NA	167192461	167196100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167192500_167196100
ES.1824.4	chr1	+	2824	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	11	0	11	0	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	False	NA	6	True	ATTAAA	-18	NA	167177570	167196101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.5	chr1	+	2430	10	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	13	-251	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	219.398898226974	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACGCTGTGTTTTTCTG	NA	False	NA	11	True	AATAAA	-8	NA	167177572	167195850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.6	chr1	+	3205	11	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	205.331658542953	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	False	NA	6	True	ATTAAA	-18	NA	167177578	167196101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183765_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.1824.8	chr1	+	7697	2	ISM	ENSMUSG00000026687.15	ENSMUST00000193091.2	600	4	-284	-3937	37	3937	intron_retention	FALSE	canonical	3	644	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAGTTTCAGGTA	NA	False	NA	NA	False	NA	NA	NA	167177596	167187396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_167177986_167180088
ES.1824.9	chr1	+	3442	11	NNC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	41	-251	intron_retention	FALSE	canonical	2	11	junction_4	272.830735072132	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACGCTGTGTTTTTCTG	NA	False	NA	11	True	AATAAA	-8	NA	167177600	167195850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_167177986_167180088_167180235_167181485_167182126_167183240_167183765_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ES.18240.1	chr2	-	1956	9	NNC	ENSMUSG00000026645.12	novel	1533	8	NA	NA	-8876	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAAATGTCTAGT	NA	False	NA	NA	False	NA	NA	NA	3376504	3343030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3343590_3343955_3344039_3347223_3347394_3347833_3347934_3349277_3349417_3362661_3362793_3366298_3366486_3367476_3367877_3376317
ES.18241.1	chr2	+	3744	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	-12	-1263	7	1263	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGAGTATGATGACATT	1009	False	NA	12	True	AATAAA	-23	NA	3425174	3456392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.10	chr2	+	4978	5	ISM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	17413	-1266	734	1266	3prime_fragment	FALSE	canonical	3	27	junction_3	2.9474565306379	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTATGATGACATTTTA	108	False	NA	15	True	AATAAA	-26	NA	3442599	3456395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.11	chr2	+	4234	2	NNC	ENSMUSG00000026648.19	novel	523	2	NA	NA	-1871	1264	intron_retention	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGTATGATGACATTT	9623	False	NA	13	True	AATAAA	-24	NA	3452114	3456393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3453811_3453855
ES.18241.2	chr2	+	3696	14	NNC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	9	1264	intron_retention	FALSE	canonical	1	1	junction_5	10.986812966989	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGTATGATGACATTT	1011	False	NA	13	True	AATAAA	-24	NA	3425176	3456393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438066_3438128_3438712_3438786_3438994_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.3	chr2	+	3648	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	9	1254	intron_retention	FALSE	canonical	1	1	junction_2	9.10433352249844	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATAAGTACTTGAGTAT	1011	False	NA	3	True	AATAAA	-14	NA	3425176	3456383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3425364_3426400_3426453_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.4	chr2	+	3594	12	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	-7	1259	intron_retention	FALSE	canonical	0	0	junction_3	12.2629590755762	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTTGAGTATGATGA	1014	False	NA	8	True	AATAAA	-19	NA	3425179	3456388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3425364_3426400_3426453_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.5	chr2	+	3687	14	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	-2	1257	intron_retention	FALSE	canonical	1	1	junction_5	8.54365746271681	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1019	False	NA	6	True	AATAAA	-17	NA	3425184	3456386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438066_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.6	chr2	+	3654	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	3	1257	intron_retention	FALSE	canonical	0	0	junction_4	9.10547759440559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1024	False	NA	6	True	AATAAA	-17	NA	3425189	3456386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438038_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.7	chr2	+	3666	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	6	1259	intron_retention	FALSE	canonical	0	0	junction_4	9.10547759440559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTTGAGTATGATGA	1027	False	NA	8	True	AATAAA	-19	NA	3425192	3456388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.8	chr2	+	2719	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	12	-262	-3	262	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATT	1033	False	NA	NA	False	NA	NA	NA	3425198	3455391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ES.18241.9	chr2	+	4116	14	NNC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	14	1257	intron_retention	FALSE	canonical	0	0	junction_12	9.0331408234398	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTACTTGAGTATGAT	1050	False	NA	6	True	AATAAA	-17	NA	3425215	3456386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3450896_3451411_3453884
ES.18242.1	chr2	+	3021	1	ISM	ENSMUSG00000026648.19	ENSMUST00000061852.12	7075	16	36803	176	7985	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGTCACCATGTATGT	345	False	NA	NA	False	AATAAA	-15	NA	3461970	3464991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3462000_3465000
ES.18243.1	chr2	-	3769	1	Antisense	novelGene_ENSMUSG00000026648.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGGTAAGCACATGCA	NA	False	NA	NA	False	NA	NA	NA	3432806	3429037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_3429000_3432800
ES.18244.1	chr2	-	173	1	Intergenic	novelGene_15139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTCTAGTACTA	NA	False	NA	NA	False	NA	NA	NA	3436034	3435861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_3435900_3436000
ES.18245.1	chr2	-	5241	2	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	17441	4122	intron_retention	TRUE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGCTTCTGTTATGT	NA	False	NA	NA	False	AATAAA	-28	NA	3458015	3452729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3453778_3453822
ES.18245.10	chr2	-	4057	6	NIC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	19	-5	intron_retention	FALSE	canonical	1	1	junction_5	83.8703761765738	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTTCCTGTTGTTCTG	NA	False	NA	-7	True	AATAAA	-11	NA	3475437	3456856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475373
ES.18245.11	chr2	-	4016	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	71	240	0	-240	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAATGCTGCCCGTTTT	NA	False	NA	NA	False	NA	NA	NA	3475997	3457091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.12	chr2	-	3115	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-100	-684	-38	661	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTGCCCTTAAGATT	NA	False	NA	NA	False	AATAAA	-34	NA	3476106	3457955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.13	chr2	-	3277	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-57	1107	-57	658	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATGTGCCCTTAAG	NA	False	NA	NA	False	AATAAA	-31	NA	3476125	3457958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.14	chr2	-	2997	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-108	-558	-46	535	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTTTGACTGTCTAG	NA	False	NA	NA	False	ATTAAA	-22	NA	3476114	3458081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.15	chr2	-	3087	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	10	1230	10	535	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTTTGACTGTCTAG	NA	False	NA	NA	False	ATTAAA	-22	NA	3476058	3458081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.16	chr2	-	2554	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-108	-115	-46	92	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGGCTCACTGCTCCAG	NA	False	NA	82	True	AATAAA	-26	NA	3476114	3458524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.17	chr2	-	2700	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-46	1673	-46	92	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGGCTCACTGCTCCAG	NA	False	NA	82	True	AATAAA	-26	NA	3476114	3458524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.18	chr2	-	2516	6	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	-27	4	intron_retention	FALSE	canonical	2	2	junction_5	83.4903587248252	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTCTGGGAGTTCTAA	NA	False	NA	-6	True	AATAAA	-22	NA	3476033	3458612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475754
ES.18245.19	chr2	-	2566	6	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_4	106.227303458198	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476114	3458616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3468246_3468351_3475739
ES.18245.2	chr2	-	5446	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-38	-1081	-38	1081	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTACTGGTGGTCAGT	NA	False	NA	NA	False	NA	NA	NA	3476106	3455770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.20	chr2	-	4054	4	NIC	ENSMUSG00000026646.17	novel	2331	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_3	72.7751483833748	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTCTGGGAGTT	NA	False	NA	-10	True	AATAAA	-18	NA	3476067	3458616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3459767_3460793_3460924_3463517_3465964_3475739
ES.18245.21	chr2	-	2598	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-46	1775	-46	-9	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTCATCTTTCTGGG	NA	False	NA	-20	True	AATAAA	-8	NA	3476114	3458626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.22	chr2	-	2380	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-119	70	-57	-70	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGTCTGATTGAATTT	NA	False	NA	-3	True	GATAAA	-16	NA	3476125	3458709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.23	chr2	-	1674	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-5	2658	-5	-870	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTATATTACTGTTTAT	NA	False	NA	4	True	AATATA	-23	NA	3476073	3459509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.24	chr2	-	1560	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-108	879	-46	-879	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGCCAAGTATATT	NA	False	NA	-5	True	AATATA	-14	NA	3476114	3459518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.25	chr2	-	1190	3	ISM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-31	8428	-31	-6640	5prime_fragment	FALSE	canonical	3	149	junction_2	2	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTTTGTACTTTCTAA	NA	False	NA	-2	True	ATTAAA	-15	NA	3476099	3465279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3465964_3473538_3473685_3475739
ES.18245.26	chr2	-	1000	2	ISM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-49	6640	13	-6640	5prime_fragment	FALSE	canonical	3	69	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTTTGTACTTTCTAA	NA	False	NA	-2	True	ATTAAA	-15	NA	3476055	3465279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3465964_3475739
ES.18245.3	chr2	-	5249	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-52	-2866	10	1078	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCAGTTACTGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	3476058	3455773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.4	chr2	-	4374	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	-46	-1	-46	1	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTCTGTATTTG	NA	False	NA	-1	True	AATAAA	-17	NA	3476114	3456850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.5	chr2	-	1318	2	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTCTGTATTTG	NA	False	NA	-1	True	AATAAA	-17	NA	3476062	3456850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3458138_3476031
ES.18245.7	chr2	-	4212	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	-93	-1788	-31	0	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTGTTCTGTATTT	NA	False	NA	-2	True	AATAAA	-16	NA	3476099	3456851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ES.18245.8	chr2	-	4271	6	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	31	-1	intron_retention	FALSE	canonical	1	1	junction_2	75.8904473566997	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTTGTTCTGTATT	NA	False	NA	-3	True	AATAAA	-15	NA	3476037	3456852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3459767_3460793_3460924_3463541_3463665_3465303_3465964_3473538_3473685_3475739
ES.18245.9	chr2	-	4386	7	NNC	ENSMUSG00000026646.17	novel	4327	6	NA	NA	-20	-3	intron_retention	TRUE	canonical	0	0	junction_4	97.2409664470461	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCTGTTGTTCTGTA	NA	False	NA	-5	True	AATAAA	-13	NA	3476026	3456854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3468246_3468351_3473538_3473685_3475739
ES.18246.1	chr2	+	196	1	Intergenic	novelGene_15140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGTGAATTTA	3526	False	NA	NA	False	AATAAA	-10	NA	3478705	3478901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3478700_3478900
ES.18247.1	chr2	-	1859	15	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-14	5388	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	272.777671672858	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTCTAATTTGAATAA	3999	False	NA	NA	False	AATAAA	-26	NA	3513794	3484498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3484550_3489816_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.10	chr2	-	5690	10	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-28	-4	intron_retention	FALSE	canonical	3	902	junction_2	55.4017871976289	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	3985	False	NA	-9	True	ATTAAA	-16	NA	3513808	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.11	chr2	-	3129	16	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	411.172448277146	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	3985	False	NA	-9	True	ATTAAA	-16	NA	3513808	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3508133_3508787_3509329_3510058_3512051_3512135_3512210_3512292_3513670
ES.18247.12	chr2	-	2773	13	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-30	-4	intron_retention	FALSE	canonical	3	902	junction_5	75.9127331582493	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	3983	False	NA	-9	True	ATTAAA	-16	NA	3513810	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.13	chr2	-	2419	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	281.469369411948	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	4000	False	NA	-9	True	ATTAAA	-16	NA	3513793	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3493457_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.15	chr2	-	4991	12	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	947	junction_7	68.3597677822246	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	4007	False	NA	-9	True	ATTAAA	-16	NA	3513786	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.16	chr2	-	7641	10	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-31	-4	intron_retention	FALSE	canonical	3	947	junction_5	55.1028219572675	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	3982	False	NA	-9	True	ATTAAA	-16	NA	3513811	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3492148_3492557_3492771_3495534_3497757_3499058_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.17	chr2	-	1677	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	379.945246756088	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	4005	False	NA	-9	True	ATTAAA	-16	NA	3513788	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492144_3492557_3492771_3495534_3495591_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.18	chr2	-	1650	13	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-4	combination_of_known_splicesites	TRUE	canonical	2	27	junction_11	284.841317910322	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	4000	False	NA	-9	True	ATTAAA	-16	NA	3513793	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512210_3512292_3513670
ES.18247.19	chr2	-	1574	13	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-28	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	285.886766142743	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGGAGTCTTTGTTT	3985	False	NA	-9	True	ATTAAA	-16	NA	3513808	3489890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.23	chr2	-	1727	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	282.045948667524	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTGGAGTCTTTGTT	4001	False	NA	-10	True	ATTAAA	-15	NA	3513792	3489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502088_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.25	chr2	-	1728	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	283.203650563173	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTGGAGTCTTTGTT	4000	False	NA	-10	True	ATTAAA	-15	NA	3513793	3489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492142_3492555_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.26	chr2	-	1740	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	283.203650563173	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTGGAGTCTTTGTT	3985	False	NA	-10	True	ATTAAA	-15	NA	3513808	3489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492132_3492548_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.28	chr2	-	3730	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-5	intron_retention	FALSE	canonical	0	0	junction_4	440.831825331216	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTGGAGTCTTTGTT	4000	False	NA	-10	True	ATTAAA	-15	NA	3513793	3489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492674_3495534_3497757_3498807_3498940_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.29	chr2	-	4336	12	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-26	-5	intron_retention	FALSE	canonical	3	947	junction_7	65.9827174968147	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTGGAGTCTTTGTT	3987	False	NA	-10	True	ATTAAA	-15	NA	3513806	3489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490806_3491973_3492148_3492557_3492771_3495534_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.3	chr2	-	1918	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	-123	0	-123	0	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3819	False	NA	-5	True	ATTAAA	-20	NA	3513974	3489886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.30	chr2	-	2430	2	FSM	ENSMUSG00000109865.2	ENSMUST00000156008.2	675	2	313	-2068	313	-40	multi-exon	FALSE	canonical	3	980	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCTATGTTTCTATTAA	5339	False	NA	-45	True	AATAAA	-20	NA	3492766	3489926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3492148_3492557
ES.18247.31	chr2	-	1694	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-26	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	377.482583163404	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATAAGCTATGTTTCT	3987	False	NA	-50	True	AATAAA	-15	NA	3513806	3489931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495632_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512287_3513670
ES.18247.33	chr2	-	1754	15	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-49	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	360.744588543287	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGGTATAAGCTATGT	4000	False	NA	-54	True	AATAAA	-11	NA	3513793	3489935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3494224_3494291_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.36	chr2	-	4557	11	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-28	-828	intron_retention	FALSE	canonical	3	947	junction_6	44.0567815438214	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTTTGTTTGTTTTG	3985	False	NA	NA	False	AATAAA	-13	NA	3513808	3490840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3492148_3492557_3492771_3495534_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.37	chr2	-	2020	12	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	40	1531	-31	577	5prime_fragment	FALSE	canonical	3	902	junction_3	52.2351643693615	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGAAGATACATGGAAC	3982	False	NA	NA	False	AAAAAG	-5	NA	3513811	3491417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.38	chr2	-	2566	3	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	16674	1551	1978	557	internal_fragment	FALSE	canonical	3	980	junction_1	41.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAGAAAAAGAAAA	928	False	NA	NA	False	NA	NA	NA	3497177	3491437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3492148_3492557_3492771_3495534
ES.18247.39	chr2	-	1651	12	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	58	1882	-13	226	5prime_fragment	FALSE	canonical	3	902	junction_3	52.2351643693615	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGCTTCTCTGTGCTCT	4000	False	NA	NA	False	AAGAAA	-40	NA	3513793	3491768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.4	chr2	-	1743	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	283.331177622615	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3988	False	NA	-5	True	ATTAAA	-20	NA	3513805	3489886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502170_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.40	chr2	-	2340	9	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	43	6345	-28	777	5prime_fragment	FALSE	canonical	3	947	junction_4	44.2081369772579	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTAGTATTTGTAGGTA	3985	False	NA	NA	False	NA	NA	NA	3513808	3496231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.41	chr2	-	8269	3	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	58	14183	-13	-2518	5prime_fragment	FALSE	canonical	3	1063	junction_2	6.5	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATTGACTGTGTTCAA	4000	False	NA	NA	False	NA	NA	NA	3513793	3504069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3512135_3512210_3512292_3513670
ES.18247.42	chr2	-	4441	5	FSM	ENSMUSG00000051396.16	ENSMUST00000140494.2	2390	5	-170	-1881	-170	-1	multi-exon	FALSE	canonical	3	6	junction_1	525.594425389007	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGGTTTGTCTACTT	3796	False	NA	NA	False	AATAAA	-18	NA	3513997	3505564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3508787_3509329_3510058_3512051_3512135_3512210_3512292_3513670
ES.18247.43	chr2	-	6769	3	ISM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	63	15678	-8	-4013	5prime_fragment	FALSE	canonical	3	1063	junction_2	6.5	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGGTTTGTCTACTT	4005	False	NA	NA	False	AATAAA	-18	NA	3513788	3505564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_3512135_3512210_3512292_3513670
ES.18247.44	chr2	-	4857	4	NIC	ENSMUSG00000051396.16	novel	2390	5	NA	NA	-46	-4	intron_retention	FALSE	canonical	3	31	junction_1	489.582361701164	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGGTTTGTCTA	3920	False	NA	NA	False	AATAAA	-15	NA	3513873	3505567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3510058_3512051_3512135_3512210_3512292_3513670
ES.18247.45	chr2	-	4513	5	FSM	ENSMUSG00000051396.16	ENSMUST00000124331.8	4314	5	-203	4	-170	-4	multi-exon	FALSE	canonical	1	2	junction_2	532.771702983557	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGGTTTGTCTA	3796	False	NA	NA	False	AATAAA	-15	NA	3513997	3505567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_3508787_3509329_3510133_3512051_3512135_3512210_3512292_3513670
ES.18247.46	chr2	-	5032	4	NIC	ENSMUSG00000051396.16	novel	4314	5	NA	NA	-147	-5	intron_retention	FALSE	canonical	1	2	junction_1	503.252311359708	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTTGTGGGTTTGTCT	3819	False	NA	NA	False	AATAAA	-14	NA	3513974	3505568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3510133_3512051_3512135_3512210_3512292_3513670
ES.18247.47	chr2	-	4727	3	NNC	ENSMUSG00000051396.16	novel	4314	5	NA	NA	1525	-6	intron_retention	FALSE	canonical	0	0	junction_1	538	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTGTGGGTTTGTC	5524	False	NA	NA	False	AATAAA	-13	NA	3512269	3505569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3510133_3512029_3512135_3512210
ES.18247.48	chr2	-	6302	3	NIC	ENSMUSG00000051396.16	novel	4314	5	NA	NA	1	-6	intron_retention	FALSE	canonical	3	6	junction_1	528.5	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTGTGGGTTTGTC	4000	False	NA	NA	False	AATAAA	-13	NA	3513793	3505569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3508787_3509329_3512292_3513670
ES.18247.5	chr2	-	1709	14	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	283.228408463817	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGTCTTTGTTTTCT	4018	False	NA	-6	True	ATTAAA	-19	NA	3513775	3489887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503624_3503769_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.7	chr2	-	3095	13	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-133	-1	intron_retention	FALSE	canonical	3	902	junction_4	59.2299544149749	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGTCTTTGTTTTCT	3809	False	NA	-6	True	ATTAAA	-19	NA	3513984	3489887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.8	chr2	-	3717	13	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	947	junction_8	67.7845852683337	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	3981	False	NA	-7	True	ATTAAA	-18	NA	3513812	3489888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18247.9	chr2	-	6457	11	NIC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	947	junction_6	72.176242628721	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGAGTCTTTGTTTTC	4000	False	NA	-7	True	ATTAAA	-18	NA	3513793	3489888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3497757_3499058_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ES.18248.1	chr2	+	2695	5	NNC	ENSMUSG00000039496.9	novel	3013	4	NA	NA	-36	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATCAAATGTACTCAT	921	False	NA	NA	False	ATTAAA	-16	NA	3514030	3527336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3514125_3520337_3520466_3522052_3522195_3524847_3525291_3525448
ES.18249.1	chr2	+	496	1	FSM	ENSMUSG00000082580.4	ENSMUST00000122241.2	312	1	-17	-167	-17	167	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAACCAGGAAGCAA	1033	False	NA	NA	False	NA	NA	NA	3551776	3552272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3551800_3552300
ES.1825.1	chr1	-	177	1	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167179353	167179176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167179200_167179400
ES.18250.1	chr2	-	172	1	Intergenic	novelGene_15141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGTATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3568714	3568542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_3568500_3568700
ES.18251.1	chr2	-	134	1	Intergenic	novelGene_15142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	3669344	3669210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_3669200_3669300
ES.18252.1	chr2	+	3165	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	935	False	NA	19	True	AATAAA	-25	NA	3714485	3783179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
ES.18252.2	chr2	+	1115	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	38	2003	18	218	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATTACTGTTTATGTT	982	False	NA	NA	False	TATAAA	-11	NA	3714532	3781176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
ES.18252.3	chr2	+	3118	5	NNC	ENSMUSG00000026655.16	novel	688	5	NA	NA	75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.9603427410583	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCATGTTTGTCTCGTTT	1039	False	NA	17	True	AATAAA	-23	NA	3714589	3783177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3714674_3758928_3758988_3773832_3774017_3779454_3779606_3780537
ES.18252.4	chr2	+	2364	2	Intergenic	novelGene_15143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATGAAAAACCAAAAAAAAAA	310	False	NA	NA	False	NA	NA	NA	3727489	3730026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3728161_3728333
ES.18252.5	chr2	+	3127	4	NNC	ENSMUSG00000026655.16	novel	3602	5	NA	NA	-21468	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.2297398381489	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCATGTTTGTCTCGTTT	326	False	NA	17	True	AATAAA	-23	NA	3750276	3783177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_3750429_3773832_3774017_3779454_3779606_3780537
ES.18252.6	chr2	+	3981	2	ISM	ENSMUSG00000026655.16	ENSMUST00000176254.2	300	3	3283	-2516	3283	-1	3prime_fragment	FALSE	canonical	3	126	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTTTGTCTCGTTTG	7588	False	NA	18	True	AATAAA	-24	NA	3778265	3783178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_3779606_3780537
ES.18253.1	chr2	+	175	1	Intergenic	novelGene_15144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAGAGATACAA	NA	False	NA	NA	False	NA	NA	NA	3992304	3992479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_3992300_3992500
ES.18254.1	chr2	-	209	1	Intergenic	novelGene_15145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGAAAGATAGTGCATA	NA	False	NA	NA	False	AGTAAA	-6	NA	4343235	4343026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4343000_4343200
ES.18255.1	chr2	-	177	1	Intergenic	novelGene_15146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAACTTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	4364002	4363825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4363800_4364000
ES.18256.1	chr2	+	6108	23	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9704370661133	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTTGCCTCTTGGACA	4076	False	NA	NA	False	ATTAAA	-21	NA	4405623	4618854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4405662_4436009_4436076_4477931_4478027_4488850_4488944_4502799_4502885_4518599_4518657_4519807_4519831_4534602_4534687_4539356_4539423_4539983_4540042_4542049_4542137_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.10	chr2	+	8552	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	132	0	intron_retention	FALSE	canonical	2	2	junction_12	19.9142257918526	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4584	False	NA	NA	False	ATTAAA	-19	NA	4564717	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4564948_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809
ES.18256.11	chr2	+	5473	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	142	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	16.8924292707315	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTAATTTATTCTTTT	4594	False	NA	NA	False	ATTAAA	-15	NA	4564727	4618751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4564948_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.12	chr2	+	5231	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	151	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.8877673906562	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTTCAAAATGAAAACA	4603	False	NA	NA	False	ATTAAA	-1	NA	4564736	4618834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777_4617500_4617892
ES.18256.14	chr2	+	5542	11	NNC	ENSMUSG00000026657.18	novel	6538	25	NA	NA	151	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.4158819570897	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4603	False	NA	NA	False	ATTAAA	-19	NA	4564736	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606928_4607091_4608187_4609063_4615777
ES.18256.15	chr2	+	4991	10	ISM	ENSMUSG00000026657.18	ENSMUST00000075767.14	6761	24	185463	2	20262	0	3prime_fragment	FALSE	canonical	2	2	junction_8	23.4920527670503	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	NA	False	NA	NA	False	ATTAAA	-19	NA	4591248	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4612882_4615777
ES.18256.16	chr2	+	2407	6	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	31070	-562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.1761792176653	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGGCCTTTCAGTTTT	4778	False	NA	16	True	AGTAAA	-20	NA	4602056	4616833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615953
ES.18256.17	chr2	+	4601	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37491	-1457	31071	0	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4779	False	NA	NA	False	ATTAAA	-19	NA	4602057	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.18	chr2	+	2637	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37495	503	31075	-503	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAAGTGTTTTACCGTTG	4783	False	NA	75	True	AAAAAG	-14	NA	4602061	4616892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.19	chr2	+	4459	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37524	-1348	31104	-10	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATCTGCTTTTAATTT	4812	False	NA	NA	False	ATTAAA	-7	NA	4602090	4618743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.2	chr2	+	177	1	Intergenic	novelGene_15147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	4535900	4536077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4535900_4536100
ES.18256.20	chr2	+	3540	4	NNC	ENSMUSG00000026657.18	novel	6538	25	NA	NA	31107	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8824602048746	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4815	False	NA	NA	False	ATTAAA	-19	NA	4602093	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4602206_4608806_4609063_4610780_4610878_4615777
ES.18256.21	chr2	+	2509	6	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	31108	-560	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.8229237271269	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCCTTTCAGTTTTTG	4816	False	NA	18	True	AGTAAA	-22	NA	4602094	4616835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4602206_4605963_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.22	chr2	+	7476	7	NNC	ENSMUSG00000026657.18	novel	6538	25	NA	NA	31125	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	28.5832118559129	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4833	False	NA	NA	False	ATTAAA	-19	NA	4602111	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4615333_4615371
ES.18256.23	chr2	+	4158	3	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	43514	-1461	37094	2	3prime_fragment	FALSE	canonical	3	56	junction_1	1	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGCCTCTTGGACACT	NA	False	NA	NA	False	ATTAAA	-23	NA	4608080	4618856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4609063_4610780_4610878_4615777
ES.18256.3	chr2	+	3993	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	-140	502	-138	-502	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGTTTTACCGTTGT	4293	False	NA	76	True	AAAAAG	-15	NA	4564426	4616893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.4	chr2	+	5953	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	-134	-1464	-132	5	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTCTTGGACACTTTG	4299	False	NA	NA	False	ATTAAA	-26	NA	4564432	4618859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.5	chr2	+	5845	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	-133	-1357	-131	-1	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAATTTATTCTTTTT	4300	False	NA	NA	False	ATTAAA	-16	NA	4564433	4618752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.6	chr2	+	5575	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.8877673906562	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCAGTTGCCTCTTGGA	4422	False	NA	NA	False	ATTAAA	-19	NA	4564555	4618852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4564777_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.8	chr2	+	3702	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	5	-552	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	16.8924292707315	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTTGTTTTTGGG	4457	False	NA	26	True	AGTAAA	-30	NA	4564590	4616843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4564948_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18256.9	chr2	+	3551	13	NNC	ENSMUSG00000026657.18	novel	4355	12	NA	NA	129	-561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.8877673906562	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGGCCTTTCAGTTTTT	4581	False	NA	17	True	AGTAAA	-21	NA	4564714	4616834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4564948_4565042_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ES.18257.1	chr2	-	761	4	Antisense	novelGene_ENSMUSG00000026657.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATCCAACGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	4527586	4516920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4517364_4517582_4517731_4518216_4518304_4527503
ES.18258.1	chr2	-	316	2	Antisense	novelGene_ENSMUSG00000026657.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGGCTCTTGCTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	4564662	4560821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4560985_4564509
ES.18259.1	chr2	+	176	1	Intergenic	novelGene_15148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	4646485	4646661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4646500_4646700
ES.1826.1	chr1	-	3588	1	Antisense	novelGene_ENSMUSG00000026687.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAACCAGGAGGCAGT	NA	False	NA	NA	False	AAAAAG	-9	NA	167196619	167193031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_167193000_167196600
ES.18260.1	chr2	-	3579	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-57	0	-30	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	False	NA	98	True	AGTAAA	-23	NA	4656954	4626868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ES.18260.10	chr2	-	3059	10	NIC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	-8	-492	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	52.5378170675393	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGAAGAAACTATATCA	NA	False	NA	NA	False	NA	NA	NA	4656906	4627360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648596_4650379_4650485_4653051_4653130_4656726
ES.18260.12	chr2	-	2746	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-19	795	1	-795	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTATCAGAAATGCCC	NA	False	NA	NA	False	CATAAA	-13	NA	4656916	4627663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ES.18260.13	chr2	-	1600	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	-21	0	-21	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATGGGTCATTGAAT	NA	False	NA	NA	False	NA	NA	NA	4656945	4628838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ES.18260.2	chr2	-	3541	10	NNC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.1960852729085	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	False	NA	98	True	AGTAAA	-23	NA	4656922	4626868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650479_4653051_4653130_4656726
ES.18260.3	chr2	-	2474	1	NIC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	27548	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGGTGCTGCTTGATT	NA	False	NA	96	True	AGTAAA	-21	NA	4629344	4626870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4626900_4629300
ES.18260.5	chr2	-	3466	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-48	104	-21	-104	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATTGACTGTGTCCG	NA	False	NA	-6	True	TTTAAA	-30	NA	4656945	4626972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ES.18260.6	chr2	-	3455	10	NIC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	1	-106	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	52.5378170675393	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCTATTGACTGTGTC	NA	False	NA	-8	True	TTTAAA	-28	NA	4656916	4626974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648596_4650379_4650485_4653051_4653130_4656726
ES.18260.8	chr2	-	2575	1	NIC	ENSMUSG00000039449.15	novel	3522	10	NA	NA	27334	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGTTACAACTCTATT	NA	False	NA	-17	True	TTTAAA	-19	NA	4629558	4626983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4627000_4629600
ES.18260.9	chr2	-	3064	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-22	480	-2	-480	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATCATATGACATCAGT	NA	False	NA	NA	False	CATAAA	-8	NA	4656919	4627348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ES.18261.1	chr2	-	165	1	Intergenic	novelGene_15149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGATAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	4675448	4675283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4675300_4675400
ES.18262.1	chr2	+	178	1	Intergenic	novelGene_15150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	4717198	4717376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4717200_4717400
ES.18263.1	chr2	+	4037	9	FSM	ENSMUSG00000048186.15	ENSMUST00000184139.8	2251	9	-204	-1582	-204	3	multi-exon	FALSE	canonical	2	4	junction_5	3.45506874027131	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTCTTGCTTGCTAC	4239	False	NA	7	True	AATAAA	-18	NA	4722437	4806956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343_4801395_4804764
ES.18263.2	chr2	+	2676	5	ISM	ENSMUSG00000048186.15	ENSMUST00000115022.8	1945	7	-34	34541	-31	-34541	5prime_fragment	FALSE	canonical	3	9	junction_4	2.12132034355964	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTGTGTATATTTGCAA	4412	False	NA	NA	False	AATAAA	-17	NA	4722610	4759203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530
ES.18263.3	chr2	+	903	3	ISM	ENSMUSG00000048186.15	ENSMUST00000115022.8	1945	7	15	44340	15	-44340	5prime_fragment	FALSE	canonical	3	12	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAATCTATGACACCCT	4461	False	NA	NA	False	NA	NA	NA	4722659	4749404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4723104_4725291_4725376_4749029
ES.18263.4	chr2	+	4655	7	NNC	ENSMUSG00000048186.15	novel	1945	7	NA	NA	32	-22286	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	6.0667582410671	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTCTGGTCATTTTTAT	4478	False	NA	NA	False	NA	NA	NA	4722676	4771458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757580_4757803_4767888_4768381_4768454
ES.18263.5	chr2	+	4892	1	Intergenic	novelGene_15151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4759306	4764198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4759300_4764200
ES.18263.6	chr2	+	5066	1	Intergenic	novelGene_15152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTGTGATTATTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	4786156	4791222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4786200_4791200
ES.18264.1	chr2	+	174	1	Intergenic	novelGene_15153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCGGAACAAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	4836013	4836187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4836000_4836200
ES.18265.1	chr2	+	155	1	Intergenic	novelGene_15154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	4861006	4861161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4861000_4861200
ES.18266.1	chr2	+	1364	9	NNC	ENSMUSG00000026662.14	novel	738	6	NA	NA	-281	-1263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.289419606591	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCTCATTGTGTCTA	3811	False	NA	14	True	ATTAAA	-14	NA	4886093	4911685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886119_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.10	chr2	+	1578	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-44	-1261	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATTGTGTCTACA	4048	False	NA	16	True	ATTAAA	-16	NA	4886330	4911687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.11	chr2	+	2733	4	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-44	348	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	247.247963703557	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGAAACTATACTG	4048	False	NA	8	True	AATAAA	-17	NA	4886330	4913296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4910282_4910496_4911391
ES.18266.13	chr2	+	3475	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-33	1877	-33	543	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGGCTTAAGAGATCCAT	4059	False	NA	NA	False	ATTAAA	-23	NA	4886341	4913491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.14	chr2	+	3280	9	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-25	362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	187.56398908106	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4067	False	NA	22	True	AATAAA	-31	NA	4886349	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910288_4910496_4911391
ES.18266.15	chr2	+	2619	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-5	2705	-5	-285	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGATGCCCTTTTTAGT	4087	False	NA	32	True	AATAAA	-29	NA	4886369	4912663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.16	chr2	+	3257	9	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	15	362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.289419606591	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4107	False	NA	22	True	AATAAA	-31	NA	4886389	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886672_4889131_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.17	chr2	+	4157	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	19	-1039	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCAGAGTTCTAGATCT	4111	False	NA	2	True	AATAAA	-15	NA	4886393	4914329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.18	chr2	+	4385	10	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_9	177.015030400399	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATGTCTCTGTTTACT	4171	False	NA	NA	False	AATAAA	-17	NA	4886453	4915368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391_4912038_4912892
ES.18266.19	chr2	+	2192	10	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	239	357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	181.354641994186	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATACTGTTGGACTTG	4331	False	NA	17	True	AATAAA	-26	NA	4886613	4913305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391_4912038_4912862
ES.18266.2	chr2	+	3485	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-222	2056	-222	364	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGGACTTGCTTCTAT	3870	False	NA	24	True	AATAAA	-33	NA	4886152	4913312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.20	chr2	+	999	7	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	252	-1270	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	210.964188640842	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACAACAAAATCTCATT	4344	False	NA	7	True	ATTAAA	-7	NA	4886626	4911678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.21	chr2	+	3749	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	265	-1185	intron_retention	FALSE	canonical	3	382	junction_1	79.3486236908533	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGCCTTTTCCTGTTAC	4357	False	NA	4	True	AATAAA	-11	NA	4886639	4911763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4893993_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.22	chr2	+	2243	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	267	-285	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGATGCCCTTTTTAGT	4359	False	NA	32	True	AATAAA	-29	NA	4886641	4912663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.23	chr2	+	2503	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	268	2548	268	-128	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCAATCTACAAAGGTGT	4360	False	NA	NA	False	ATTAAA	-21	NA	4886642	4912820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.24	chr2	+	3054	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	275	534	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGCCAGGGGCTTAA	4367	False	NA	NA	False	ATTAAA	-14	NA	4886649	4913482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.25	chr2	+	3688	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-392	-363	289	363	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	4381	False	NA	23	True	AATAAA	-32	NA	4886663	4913311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.26	chr2	+	5441	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	291	362	intron_retention	FALSE	canonical	3	440	junction_1	51.033402426894	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4383	False	NA	22	True	AATAAA	-31	NA	4886665	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.27	chr2	+	3686	9	NNC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	292	353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.289419606591	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAACTATACTGTTGGA	4384	False	NA	13	True	AATAAA	-22	NA	4886666	4913301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887387_4889131_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.28	chr2	+	2019	9	NNC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	292	-1270	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	232.938263011898	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACAACAAAATCTCATT	4384	False	NA	7	True	ATTAAA	-7	NA	4886666	4911678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4898028_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.29	chr2	+	2140	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-389	1182	292	-1182	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTTTTCCTGTTACATT	4384	False	NA	7	True	AATAAA	-14	NA	4886666	4911766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.3	chr2	+	3333	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-175	363	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	3917	False	NA	23	True	AATAAA	-32	NA	4886199	4913311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.30	chr2	+	5331	7	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	292	357	intron_retention	FALSE	canonical	3	91	junction_1	183.08596948489	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATACTGTTGGACTTG	4384	False	NA	17	True	AATAAA	-26	NA	4886666	4913305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.31	chr2	+	3635	9	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	292	348	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	188.969408899959	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGAAACTATACTG	4384	False	NA	8	True	AATAAA	-17	NA	4886666	4913296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887352_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.32	chr2	+	3821	8	NIC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	292	-1257	intron_retention	FALSE	canonical	3	440	junction_1	51.033402426894	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTGTGTCTACACATC	4384	False	NA	20	True	ATTAAA	-20	NA	4886666	4911691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.33	chr2	+	4781	8	NIC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	292	-297	intron_retention	FALSE	canonical	3	440	junction_1	51.033402426894	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	4384	False	NA	20	True	AATAAA	-17	NA	4886666	4912651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.34	chr2	+	3854	10	NNC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	292	-1033	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_9	222.502489929195	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTCTAGATCTTCATTT	4384	False	NA	8	True	AATAAA	-21	NA	4886666	4914335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391_4912038_4912892
ES.18266.35	chr2	+	4695	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	-374	-1388	307	-1032	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTAGATCTTCATTTT	4399	False	NA	9	True	AATAAA	-22	NA	4886681	4914336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.36	chr2	+	3224	8	NIC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	-35	360	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	232.355463082945	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTGTTGGACTTGCTT	4738	False	NA	20	True	AATAAA	-29	NA	4887020	4913308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4887387_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.37	chr2	+	3206	9	NNC	ENSMUSG00000026662.14	novel	2933	9	NA	NA	-27	362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.289419606591	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4746	False	NA	22	True	AATAAA	-31	NA	4887028	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887271_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.39	chr2	+	6962	7	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	389	362	intron_retention	FALSE	canonical	3	440	junction_1	54.3496907892666	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	5162	False	NA	22	True	AATAAA	-31	NA	4887444	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4889417_4893993_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.4	chr2	+	2275	7	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-55	-301	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	210.964188640842	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGCTCTTGTATAATC	4037	False	NA	16	True	AATAAA	-13	NA	4886319	4912647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.40	chr2	+	3210	9	NNC	ENSMUSG00000026662.14	novel	738	6	NA	NA	457	363	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	188.329498486031	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGGACTTGCTTCTA	5230	False	NA	23	True	AATAAA	-32	NA	4887512	4913311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4887758_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.41	chr2	+	4385	2	NNC	ENSMUSG00000026662.14	novel	738	6	NA	NA	4065	3701	intron_retention	TRUE	non_canonical	0	0	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4893259	4897728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4896735_4896818
ES.18266.42	chr2	+	1037	7	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	4805	-1279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	213.547808854754	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACTCTAAGAACAACAA	NA	False	NA	-2	True	AATAGA	-28	NA	4893999	4911669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910288_4910496_4911391
ES.18266.43	chr2	+	3605	7	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	5329	362	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_6	211.336027848227	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	NA	False	NA	22	True	AATAAA	-31	NA	4894523	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391_4912038_4912892
ES.18266.44	chr2	+	242	1	Intergenic	novelGene_15157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTATTTGAACTCACAC	3382	False	NA	NA	False	NA	NA	NA	4899259	4899501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4899300_4899500
ES.18266.45	chr2	+	2667	3	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	16779	-357	14640	357	3prime_fragment	FALSE	canonical	3	587	junction_1	5.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATACTGTTGGACTTG	7957	False	NA	17	True	AATAAA	-26	NA	4903834	4913305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4904375_4910282_4910496_4911391
ES.18266.46	chr2	+	2135	2	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	23224	-362	21085	362	3prime_fragment	FALSE	canonical	3	598	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	NA	False	NA	22	True	AATAAA	-31	NA	4910279	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4910496_4911391
ES.18266.5	chr2	+	5379	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-55	-5	-55	5	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCTGTTTACTAAGTG	4037	False	NA	NA	False	AATAAA	-22	NA	4886319	4915373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.6	chr2	+	1768	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-45	3596	-45	-1176	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGTTACATTAACTGA	4047	False	NA	13	True	AATAAA	-20	NA	4886329	4911772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.7	chr2	+	2451	10	NNC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-45	362	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_9	177.015030400399	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTTGGACTTGCTTCT	4047	False	NA	22	True	AATAAA	-31	NA	4886329	4913310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391_4912038_4912892
ES.18266.8	chr2	+	4996	6	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	229.161602368285	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATGTCTCTGTTTACT	4048	False	NA	NA	False	AATAAA	-17	NA	4886330	4915368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4886672_4889142_4889417_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18266.9	chr2	+	4331	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	-44	1032	-44	-1032	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTAGATCTTCATTTT	4048	False	NA	9	True	AATAAA	-22	NA	4886330	4914336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ES.18267.1	chr2	-	5305	1	Intergenic	novelGene_15155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCATGACTGCTCTTA	NA	False	NA	NA	False	AATGAA	-25	NA	4886359	4881054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4881100_4886400
ES.18268.1	chr2	-	3096	1	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTCCCGGTGGCGGCG	NA	False	NA	NA	False	NA	NA	NA	4889649	4886553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4886600_4889600
ES.18268.2	chr2	-	1830	9	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTCCCGGTGGCGGCG	NA	False	NA	NA	False	NA	NA	NA	4912056	4886553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4886670_4889138_4889416_4893992_4894097_4896396_4896505_4897994_4898151_4901499_4901591_4904274_4904372_4910279_4910493_4911388
ES.18268.4	chr2	-	1705	8	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4912056	4886574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4886670_4889138_4889416_4896396_4896505_4897994_4898151_4901499_4901591_4904274_4904372_4910279_4910493_4911388
ES.18268.5	chr2	-	159	1	Intergenic	novelGene_15156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	4890736	4890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4890600_4890700
ES.18268.6	chr2	-	178	1	Intergenic	novelGene_15158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	4899947	4899769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4899800_4899900
ES.18268.7	chr2	-	3773	1	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAACACCCACTTTGAT	NA	False	NA	NA	False	NA	NA	NA	4906887	4903114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_4903100_4906900
ES.18268.8	chr2	-	176	1	Intergenic	novelGene_15159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	4908525	4908349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4908300_4908500
ES.18269.1	chr2	+	1932	10	NNC	ENSMUSG00000026664.8	novel	1438	9	NA	NA	-5230	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.343041728044	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTTTTTTTAAGATT	NA	False	NA	22	True	AATAAA	-33	NA	4918599	4943554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4919066_4923814_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ES.18269.10	chr2	+	1255	9	NNC	ENSMUSG00000026664.8	novel	1438	9	NA	NA	-19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	145.37231295883	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGGCATATTAAGTCA	1033	False	NA	3	True	AATAAA	-14	NA	4923871	4943535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935658_4935706_4940779_4940930_4942486_4942622_4943117
ES.18269.13	chr2	+	2270	1	FSM	ENSMUSG00000086670.2	ENSMUST00000142299.2	311	1	-1745	-214	-1745	214	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTTGATTGCAGTTG	9192	False	NA	NA	False	AATAAA	-14	NA	4945239	4947509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4945200_4947500
ES.18269.2	chr2	+	1456	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	-20	2	-20	-2	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCATATTAAGTCAATTT	971	False	NA	7	True	AATAAA	-18	NA	4923809	4943539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ES.18269.3	chr2	+	3399	8	NIC	ENSMUSG00000026664.8	novel	1438	9	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	390	junction_4	32.9495594718314	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGGCATATTAAGTCAA	985	False	NA	4	True	AATAAA	-15	NA	4923823	4943536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4935706_4940779_4940930_4942486_4942622_4943117
ES.18269.5	chr2	+	2995	8	NIC	ENSMUSG00000026664.8	novel	1438	9	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	390	junction_4	32.0395164171511	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGGCATATTAAGTCA	985	False	NA	3	True	AATAAA	-14	NA	4923823	4943535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4942622_4943117
ES.18269.6	chr2	+	1744	2	NNC	ENSMUSG00000026664.8	novel	748	5	NA	NA	-6	-7179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGACAAAACAAAACAACAAA	985	False	NA	NA	False	NA	NA	NA	4923823	4926646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_4925448_4926526
ES.18269.8	chr2	+	1810	7	ISM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	2	1679	2	-1292	5prime_fragment	FALSE	canonical	3	390	junction_4	33.291640592397	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTTACCCTTTCTATT	993	False	NA	NA	False	AATATA	-13	NA	4923831	4941862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779
ES.18269.9	chr2	+	3127	11	Fusion	ENSMUSG00000086670.2_ENSMUSG00000026664.8	novel	1438	9	NA	NA	8	336	multi-exon	TRUE	non_canonical	0	0	junction_10	171.555705238852	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTCCATTCTTT	999	False	NA	NA	False	NA	NA	NA	4923837	4947631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117_4943192_4945419_4947276_4947440
ES.1827.1	chr1	-	668	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	11	418	11	-418	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCCTGCCTGCATCTC	4967	False	NA	-3	True	AATAAA	-28	NA	167221399	167199952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ES.18270.1	chr2	-	234	1	Intergenic	novelGene_15160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCAGGCACTCGCTTCT	NA	False	NA	NA	False	NA	NA	NA	4924776	4924542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4924500_4924800
ES.18271.1	chr2	+	3979	2	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATGGGTGCGCAGATT	4813	False	NA	NA	False	AAAAAG	-12	NA	4959488	4964976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4962788_4964296
ES.18271.2	chr2	+	2151	3	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	7.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTGATCAGTGCTTA	4813	False	NA	NA	False	NA	NA	NA	4959488	4966262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4959616_4962729_4962788_4964296
ES.18271.3	chr2	+	4245	2	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGCTTATTTTATTA	4815	False	NA	NA	False	NA	NA	NA	4959490	4965244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4962788_4964296
ES.18271.4	chr2	+	1522	4	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.1336448530109	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGATAGATTGTCATT	4818	False	NA	NA	False	NA	NA	NA	4959493	4965514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4959565_4960572_4960748_4962729_4962788_4964296
ES.18271.5	chr2	+	1270	4	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	8.01387685344754	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGCTTATTTTAT	4854	False	NA	NA	False	NA	NA	NA	4959529	4965242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4959606_4960914_4961105_4962729_4962788_4964296
ES.18271.6	chr2	+	1024	4	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.97614984548545	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAGTTGTCATGAG	4861	False	NA	NA	False	NA	NA	NA	4959536	4964959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4959646_4960914_4961109_4962729_4962788_4964296
ES.18271.7	chr2	+	1239	3	Antisense	novelGene_ENSMUSG00000069188.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	3.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGCTTATTTTAT	6198	False	NA	NA	False	NA	NA	NA	4960873	4965242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4961109_4962729_4962788_4964296
ES.18272.1	chr2	-	96	1	Intergenic	novelGene_15161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	4967015	4966919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_4966900_4967000
ES.18273.1	chr2	+	180	1	Intergenic	novelGene_15162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGAACGCTC	NA	False	NA	NA	False	NA	NA	NA	4973144	4973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4973100_4973300
ES.18274.1	chr2	+	214	1	Intergenic	novelGene_15163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTGCACGCCTTTA	5879	False	NA	NA	False	NA	NA	NA	4982059	4982273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_4982100_4982300
ES.18275.1	chr2	+	3979	1	Antisense	novelGene_ENSMUSG00000026669.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACCAAACCCCCCAAAAC	4504	False	NA	NA	False	NA	NA	NA	4998975	5002954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_4999000_5003000
ES.18276.1	chr2	-	4460	1	Genic_Genomic	ENSMUSG00000026669.15	novel	NA	NA	NA	NA	-470	446	mono-exon	FALSE	NA	NA	NA	NA	NA	821	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACCAATCTTGGAGTGG	3037	False	NA	NA	False	NA	NA	NA	4998538	4994078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_4994100_4998500
ES.18276.10	chr2	-	4476	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	29	-1011	-9	1	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTTTATCTTTTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	5017573	4994523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.101	chr2	-	3904	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-15	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.020344593412	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGCAAATGTACAAC	NA	False	NA	-24	True	AATAAA	-14	NA	5017541	4995558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997193_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.102	chr2	-	3232	5	NIC	ENSMUSG00000026669.15	novel	1343	6	NA	NA	-1194	-24	intron_retention	FALSE	canonical	3	627	junction_4	100.076220951833	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGCAAATGTACAAC	NA	False	NA	-24	True	AATAAA	-14	NA	5001899	4995558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531
ES.18276.103	chr2	-	3269	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	67	158	-9	149	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTTGTGACTCAGT	NA	False	NA	NA	False	NA	NA	NA	5017535	4995692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.104	chr2	-	2618	17	ISM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	62	2891	-14	-2355	5prime_fragment	FALSE	canonical	3	560	junction_16	61.0752289700988	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTCTCTGCTTGACC	NA	False	NA	NA	False	AATAAA	-20	NA	5017540	4998425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.106	chr2	-	3919	14	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	11	3705	intron_retention	FALSE	canonical	3	560	junction_13	61.9429017476827	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACCTTGGTCTATGCTC	NA	False	NA	NA	False	AGTAAA	-23	NA	5017553	5000126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.107	chr2	-	4519	14	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-10	3705	intron_retention	FALSE	canonical	0	0	junction_4	202.775942459249	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACCTTGGTCTATGCTC	NA	False	NA	NA	False	AGTAAA	-23	NA	5017536	5000126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5000677_5001914_5002144_5003344_5003454_5003540_5004056_5004118_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.108	chr2	-	4013	15	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-9	3705	intron_retention	FALSE	canonical	2	24	junction_12	248.175104821296	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACCTTGGTCTATGCTC	NA	False	NA	NA	False	AGTAAA	-23	NA	5017535	5000126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
ES.18276.11	chr2	-	6070	17	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1348	0	intron_retention	FALSE	canonical	3	627	junction_3	64.7947480510574	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGTTTATCTTTTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	5015807	4994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.110	chr2	-	3352	4	NNC	ENSMUSG00000026669.15	novel	2356	12	NA	NA	1537	3702	intron_retention	FALSE	canonical	0	0	junction_3	369.057658849611	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCCACCTTGGTCTATG	7909	False	NA	NA	False	AGTAAA	-20	NA	5004832	5000129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5002144_5003344_5003454_5003540_5004056_5004118
ES.18276.111	chr2	-	6514	9	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	2	3700	intron_retention	FALSE	canonical	0	0	junction_1	318.463400565905	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCCACCTTGGTCTA	NA	False	NA	NA	False	AGTAAA	-18	NA	5017562	5000131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5004056_5004118_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5012244_5013290_5013624_5017515
ES.18276.112	chr2	-	2336	12	NNC	ENSMUSG00000026669.15	novel	690	5	NA	NA	-8	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	213.30066468185	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTGGTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	5017572	5003792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5004056_5004118_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.13	chr2	-	3108	4	NIC	ENSMUSG00000026669.15	novel	789	5	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	707	junction_2	62.3021312280371	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATGTTTATCTTTTTT	1892	False	NA	NA	False	ATTAAA	-18	NA	4999683	4994525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4997835_4998553_4998668_4999380
ES.18276.14	chr2	-	5156	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	560	junction_18	74.3326897497467	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATGTTTATCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	5017536	4994525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.15	chr2	-	4376	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	176.229766917858	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATGTTTATCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	5017533	4994525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002086_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.17	chr2	-	5052	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	560	junction_17	76.4099759787015	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACATGTTTATCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	5017539	4994527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.18	chr2	-	4544	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_18	222.579671129239	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACATGTTTATCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	5017533	4994527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
ES.18276.19	chr2	-	7067	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	560	junction_18	74.3391668529791	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTACATGTTTATCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5017542	4994528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.2	chr2	-	4720	2	NIC	ENSMUSG00000026669.15	novel	869	3	NA	NA	96	431	intron_retention	FALSE	canonical	3	880	junction_1	0	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGCAA	2022	False	NA	NA	False	NA	NA	NA	4999553	4994093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996949_4997688
ES.18276.20	chr2	-	4223	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	69	-798	-7	-212	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACGCTCACAGATATTA	NA	False	NA	NA	False	NA	NA	NA	5017533	4994736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.22	chr2	-	3957	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	30	-493	-8	493	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGGTTCTCTCCACC	NA	False	NA	NA	False	AATAAA	-16	NA	5017572	4995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.23	chr2	-	7917	14	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	134	intron_retention	FALSE	canonical	3	560	junction_13	86.7736632801293	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTAGGCTAGCTGGACA	NA	False	NA	NA	False	AGTAAA	-12	NA	5017534	4995400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5005868_5006074_5006192_5008818_5008987_5009756_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.24	chr2	-	3472	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	24	-2	-14	2	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGAAACGTGACTCAG	NA	False	NA	2	True	AATAAA	-40	NA	5017578	4995532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.25	chr2	-	5855	17	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_7	256.23730913696	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017534	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5001914_5002144_5003344_5003454_5003540_5004056_5004118_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.26	chr2	-	3576	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_18	222.579671129239	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017572	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
ES.18276.27	chr2	-	5342	19	ISM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	81	0	5	0	intron_retention	FALSE	canonical	3	627	junction_5	61.7022920117735	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017521	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.28	chr2	-	3435	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_5	187.068164768611	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017562	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.3	chr2	-	6940	3	NNC	ENSMUSG00000026669.15	novel	869	3	NA	NA	-636	431	intron_retention	TRUE	non_canonical	0	0	junction_2	0.5	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGCAA	234	False	NA	NA	False	NA	NA	NA	5001341	4994093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996624_4996825_4997042_4997147
ES.18276.30	chr2	-	4223	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	-366	1010	5	0	multi-exon	FALSE	canonical	2	42	junction_19	167.610417568725	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017521	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
ES.18276.31	chr2	-	3563	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	176.398189700575	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017524	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017368
ES.18276.32	chr2	-	4171	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-13	0	intron_retention	FALSE	canonical	3	560	junction_18	65.5820097282784	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017539	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.33	chr2	-	3603	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	176.398189700575	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017508	4995534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017312
ES.18276.34	chr2	-	3332	19	NNC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1567	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	181.01841526946	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5015588	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008911_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.35	chr2	-	4186	4	ISM	ENSMUSG00000026669.15	ENSMUST00000125349.8	1343	6	-1093	1	-1093	-1	intron_retention	FALSE	canonical	3	707	junction_3	76.1679430965256	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5001798	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553
ES.18276.37	chr2	-	4163	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	11	-1	intron_retention	FALSE	canonical	3	560	junction_18	74.3326897497467	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017553	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.38	chr2	-	4331	20	NNC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	318	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	176.398189700575	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5016837	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5015912
ES.18276.4	chr2	-	5893	5	NNC	ENSMUSG00000026669.15	novel	2356	12	NA	NA	-2663	430	intron_retention	FALSE	canonical	1	1	junction_1	344.772660604057	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGCA	9373	False	NA	NA	False	NA	NA	NA	5003368	4994094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996624_4996825_4996949_4997688_5000677_5001914_5002144_5003344
ES.18276.40	chr2	-	3279	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	181.868533782639	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017533	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.41	chr2	-	8897	15	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	261.067549316499	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017550	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4997042_4997147_4998668_4999380_4999494_5000531_5002144_5003344_5004056_5004118_5004592_5005670_5005868_5006074_5006192_5008818_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.42	chr2	-	4208	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	178.840773205287	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017541	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5004056_5004118_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.43	chr2	-	3584	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.020344593412	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017561	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997556_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.44	chr2	-	6602	16	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_7	198.293004303116	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017562	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5004056_5004118_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.45	chr2	-	5212	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	560	junction_17	76.4713574621945	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017601	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.46	chr2	-	3185	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	183.307690353025	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017554	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.48	chr2	-	5397	17	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	251.492723242145	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017534	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996617_4996818_4996949_4997688_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011388_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.49	chr2	-	5072	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	560	junction_17	73.3259302124596	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017572	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5004592_5005670_5005868_5006074_5006192_5008818_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.5	chr2	-	3834	14	ISM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	7351	-430	106	430	3prime_fragment	FALSE	canonical	3	627	junction_5	69.7578228312341	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGCA	2937	False	NA	NA	False	NA	NA	NA	5009804	4994094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756
ES.18276.50	chr2	-	2736	5	NIC	ENSMUSG00000026669.15	novel	1343	6	NA	NA	-776	-1	intron_retention	FALSE	canonical	3	627	junction_4	91.4914613502266	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	94	False	NA	-1	True	AATAAA	-37	NA	5001481	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531
ES.18276.52	chr2	-	5022	16	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	-3245	-1	intron_retention	FALSE	canonical	3	627	junction_4	66.9611495985213	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5013375	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4999494_5000531_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290
ES.18276.54	chr2	-	5830	16	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	560	junction_15	81.2208511816188	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017533	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.55	chr2	-	5385	15	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	-3488	-1	intron_retention	FALSE	canonical	3	627	junction_4	68.9045479971669	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5013618	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5011390_5011877_5012244_5013290
ES.18276.56	chr2	-	3431	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	178.936470256378	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017542	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998662_4999376_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.59	chr2	-	8009	14	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	560	junction_13	76.646425593194	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	False	NA	-1	True	AATAAA	-37	NA	5017575	4995535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4998668_4999380_4999494_5000531_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.6	chr2	-	10191	4	NNC	ENSMUSG00000026669.15	novel	2475	4	NA	NA	1683	398	intron_retention	TRUE	non_canonical	0	0	junction_2	0.471404520791032	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGGAAAAAAAAAAAAAAAA	8055	False	NA	NA	False	NA	NA	NA	5004686	4994126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996624_4996825_4997068_4997171_5004056_5004118
ES.18276.62	chr2	-	4302	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	560	junction_18	71.2612997320858	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCTGTGAAACGTGAC	NA	False	NA	-2	True	AATAAA	-36	NA	5017573	4995536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.63	chr2	-	4177	18	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1567	-2	intron_retention	FALSE	canonical	3	627	junction_5	63.4873499101665	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCTGTGAAACGTGAC	NA	False	NA	-2	True	AATAAA	-36	NA	5015588	4995536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.64	chr2	-	4661	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	560	junction_18	74.555886735479	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCTGTGAAACGTGAC	NA	False	NA	-2	True	AATAAA	-36	NA	5017533	4995536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.65	chr2	-	4477	4	NIC	ENSMUSG00000026669.15	novel	789	5	NA	NA	-1379	-2	intron_retention	FALSE	canonical	3	745	junction_3	58.4826659979025	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGCTGTGAAACGTGAC	NA	False	NA	-2	True	AATAAA	-36	NA	5002084	4995536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380
ES.18276.67	chr2	-	2941	19	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	174.146241935469	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017537	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4995876_4997718_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.68	chr2	-	4035	19	NNC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	2682	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	180.360176341332	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5014473	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013755
ES.18276.7	chr2	-	7109	3	NNC	ENSMUSG00000026669.15	novel	869	3	NA	NA	-835	398	intron_retention	TRUE	non_canonical	0	0	junction_2	0.5	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGGAAAAAAAAAAAAAAAA	35	False	NA	NA	False	NA	NA	NA	5001540	4994126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996624_4996825_4997091_4997193
ES.18276.70	chr2	-	6930	17	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	560	junction_16	74.1854728029686	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017533	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.72	chr2	-	3397	19	NNC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1567	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	242.067311575383	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5015588	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999487_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009758_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.73	chr2	-	5665	17	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	560	junction_16	73.9357565305854	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017533	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.74	chr2	-	3714	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	179.279815031036	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017572	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011643_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.75	chr2	-	5551	1	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	-383	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	487	False	NA	-3	True	AATAAA	-35	NA	5001088	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4995500_5001100
ES.18276.77	chr2	-	3327	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	183.897918542991	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017573	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.79	chr2	-	4082	19	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	14	junction_6	181.03656441261	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017532	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002086_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.8	chr2	-	5279	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-9	3	intron_retention	FALSE	canonical	3	560	junction_18	71.2612997320858	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTATCTTTTTTCTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	5017535	4994521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.80	chr2	-	6076	16	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1567	-3	intron_retention	FALSE	canonical	3	627	junction_3	66.9193212424899	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5015588	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4999494_5000531_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ES.18276.82	chr2	-	5285	17	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_5	194.380255154041	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017552	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999492_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.84	chr2	-	3556	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	560	junction_18	74.5232791535804	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017541	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.85	chr2	-	5888	17	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	560	junction_16	69.4221405154724	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017539	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.86	chr2	-	3420	20	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	179.174716261442	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017533	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009917_5011150_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.87	chr2	-	6212	16	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	560	junction_15	62.6678723288275	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017533	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.89	chr2	-	4728	17	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	2	-3	intron_retention	FALSE	canonical	1	1	junction_16	190.647816257491	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGGCTGTGAAACGTGA	NA	False	NA	-3	True	AATAAA	-35	NA	5017562	4995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5017515
ES.18276.91	chr2	-	3562	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	229.426998193325	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGGCTGTGAAACGTG	NA	False	NA	-4	True	AATAAA	-34	NA	5017552	4995538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008318_5008441_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.92	chr2	-	2842	17	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	-3254	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	191.172369865522	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGGCTGTGAAACGTG	NA	False	NA	-4	True	AATAAA	-34	NA	5013384	4995538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011877_5012013_5012138_5012244_5013290
ES.18276.93	chr2	-	5342	17	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	560	junction_16	78.6503089234238	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGAGGCTGTGAAACGT	NA	False	NA	-5	True	AATAAA	-33	NA	5017531	4995539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.94	chr2	-	5269	18	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	560	junction_17	76.6896861284326	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAGAGGCTGTGAAAC	NA	False	NA	-7	True	AATAAA	-31	NA	5017535	4995541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5005868_5006074_5006192_5008818_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.95	chr2	-	6265	14	NIC	ENSMUSG00000026669.15	novel	4867	20	NA	NA	1570	-12	intron_retention	FALSE	canonical	3	627	junction_4	49.2296874881155	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAACTTGAGAGGCTGT	NA	False	NA	-12	True	AATAAA	-26	NA	5015585	4995546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_4996288_4996905_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499
ES.18276.96	chr2	-	4270	18	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	1	-17	intron_retention	FALSE	canonical	0	0	junction_5	243.021678728833	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGTACAACTTGAGAG	NA	False	NA	-17	True	AATAAA	-21	NA	5017563	4995551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996285_4996905_4996949_4997688_4997835_4998553_4999494_5000531_5000673_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
ES.18276.97	chr2	-	5405	17	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	-8	-17	intron_retention	TRUE	canonical	0	0	junction_2	291.302570362845	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGTACAACTTGAGAG	NA	False	NA	-17	True	AATAAA	-21	NA	5017572	4995551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_4996288_4996905_4996949_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5004056_5004118_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5014527_5015086_5015587_5017515
ES.18277.1	chr2	+	151	1	Intergenic	novelGene_15168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAATAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	5052134	5052285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5052100_5052300
ES.18278.1	chr2	+	157	1	Intergenic	novelGene_15169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5056335	5056492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5056300_5056500
ES.18279.1	chr2	-	4229	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-61	-1554	-55	1554	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTTTTACTCTGATAC	NA	False	NA	-16	True	NA	NA	NA	5068917	5023898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.10	chr2	-	4779	13	NNC	ENSMUSG00000026672.12	novel	2411	15	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_12	53.2642130223369	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068868	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059524_5068717
ES.18279.12	chr2	-	4887	12	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	74	junction_11	35.12386582387	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068878	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.13	chr2	-	2587	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	-174	-2	-61	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068923	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.14	chr2	-	2200	12	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-9960	0	intron_retention	FALSE	canonical	0	0	junction_11	44.7767649309991	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051968	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5051863
ES.18279.15	chr2	-	1843	12	NNC	ENSMUSG00000026672.12	novel	2411	15	NA	NA	-5323	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	61.7793995995108	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5047331	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026040_5026133_5026293_5026856_5026912_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257
ES.18279.16	chr2	-	4303	9	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-9356	0	intron_retention	FALSE	canonical	0	0	junction_8	65.8369197335355	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051364	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026293_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5051324
ES.18279.17	chr2	-	2544	15	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	46.0282189398581	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068875	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5025667_5025755_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.19	chr2	-	2549	13	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1	junction_1	47.6952128974526	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068874	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5026293_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.2	chr2	-	772	3	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-8875	1549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGACTTCTTTTACTCT	NA	False	NA	-21	True	NA	NA	NA	5050883	5023903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5024529_5047270_5047332_5050797
ES.18279.20	chr2	-	2276	12	NIC	ENSMUSG00000026672.12	novel	2411	15	NA	NA	-38	0	intron_retention	FALSE	canonical	2	9	junction_11	42.3488073929279	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTATCTGATTTA	NA	False	NA	-2	True	AGTAAA	-15	NA	5068900	5025454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5068717
ES.18279.21	chr2	-	3120	10	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-9097	2	intron_retention	FALSE	canonical	3	118	junction_4	16.5827517113713	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTACTTCTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	5051105	5026109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5041582_5044949_5045085_5047257_5047332_5050797
ES.18279.22	chr2	-	2017	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-62	659	-56	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTACTTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	5068918	5026111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.25	chr2	-	132	1	Intergenic	novelGene_15164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAATTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	5030225	5030093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5030100_5030200
ES.18279.26	chr2	-	3852	12	NNC	ENSMUSG00000026672.12	novel	697	5	NA	NA	-15	-7492	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.3261987704734	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATATTACTTATCTGTT	NA	False	NA	NA	False	AATGAA	-12	NA	5068877	5033603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5033909_5034104_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.27	chr2	-	171	1	Intergenic	novelGene_15165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	5034104	5033933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5033900_5034100
ES.18279.28	chr2	-	189	1	Intergenic	novelGene_15166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAGAAAGAACGTG	NA	False	NA	NA	False	NA	NA	NA	5036613	5036424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5036400_5036600
ES.18279.29	chr2	-	1175	7	ISM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-12	15907	-6	9608	5prime_fragment	FALSE	canonical	3	74	junction_6	40.7635458058627	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCTACTTCTTTCG	NA	False	NA	NA	False	NA	NA	NA	5068868	5041359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.3	chr2	-	1668	9	NNC	ENSMUSG00000026672.12	novel	697	5	NA	NA	-16	1549	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.5077505112565	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGACTTCTTTTACTCT	NA	False	NA	-21	True	NA	NA	NA	5068878	5023903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5024529_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5068717
ES.18279.30	chr2	-	173	1	Intergenic	novelGene_15167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	5049706	5049533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5049500_5049700
ES.18279.4	chr2	-	3783	12	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-4	1549	intron_retention	FALSE	canonical	0	0	junction_11	44.7767649309991	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGACTTCTTTTACTCT	NA	False	NA	-21	True	NA	NA	NA	5068866	5023903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051001_5068717
ES.18279.5	chr2	-	2028	11	NNC	ENSMUSG00000026672.12	novel	697	5	NA	NA	-17	1548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.6597473345456	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGACTTCTTTTACTC	NA	False	NA	-22	True	NA	NA	NA	5068879	5023904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5024529_5037961_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.6	chr2	-	3920	14	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-13	1290	intron_retention	FALSE	canonical	3	13	junction_2	43.6585731090374	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTATCTTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	5068875	5024162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026293_5028877_5028958_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.8	chr2	-	2658	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	-43	-1	-37	1	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTATCTGATTTATTT	NA	False	NA	1	True	AGTAAA	-18	NA	5068899	5025451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ES.18279.9	chr2	-	1614	7	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_4	56.8460396353363	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068873	5025452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036226_5057929_5058002_5059350_5059528_5068717
ES.1828.1	chr1	-	176	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAACAGCTA	NA	False	NA	NA	False	NA	NA	NA	167247055	167246879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167246900_167247100
ES.18280.1	chr2	-	181	1	Intergenic	novelGene_15170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACATTTTTATAATA	NA	False	NA	NA	False	NA	NA	NA	5070270	5070089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5070100_5070300
ES.18281.1	chr2	-	161	1	Intergenic	novelGene_15171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4077	False	NA	NA	False	NA	NA	NA	5079790	5079629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5079600_5079800
ES.18282.1	chr2	+	2817	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	-147	0	-147	0	multi-exon	FALSE	canonical	3	30	junction_2	4	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTCTTTGGATCG	4580	False	NA	NA	False	AATAAA	-42	NA	5142439	5235689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_5143119_5146041_5146217_5233726
ES.18282.2	chr2	+	2450	3	NNC	ENSMUSG00000026676.8	novel	2670	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTCTTTGGATCG	4714	False	NA	NA	False	AATAAA	-42	NA	5142573	5235689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5142886_5146041_5146217_5233726
ES.18283.1	chr2	+	2821	1	Intergenic	novelGene_15172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTTACTAAATACCTA	5705	False	NA	NA	False	AATAAA	-15	NA	5235762	5238583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5235800_5238600
ES.18284.1	chr2	+	2049	1	Intergenic	novelGene_15174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	9997	False	NA	NA	False	AAAACA	-45	NA	5404169	5406218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5404200_5406200
ES.18285.1	chr2	+	181	1	Intergenic	novelGene_15176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGACAAAAGGAA	NA	False	NA	NA	False	AGTAAA	-8	NA	5652898	5653079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5652900_5653100
ES.18286.1	chr2	+	624	1	Intergenic	novelGene_15178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAGATTTATGGCCAG	NA	False	NA	NA	False	NA	NA	NA	5661615	5662239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5661600_5662200
ES.18287.1	chr2	+	176	1	Intergenic	novelGene_15179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCCTA	NA	False	NA	NA	False	NA	NA	NA	5673594	5673770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5673600_5673800
ES.18288.1	chr2	-	6704	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.8740765458462	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTTGTCTGTTTCCTA	1202	False	NA	1	True	AATAAA	-21	NA	5680832	5298267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.10	chr2	-	7132	12	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	-53	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.050349845467	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	NA	False	NA	-5	True	AATAAA	-15	NA	5719379	5298273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5703832_5703956_5718956
ES.18288.11	chr2	-	6732	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	402	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.1170716943246	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	1579	False	NA	-5	True	AATAAA	-15	NA	5680455	5298273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680309
ES.18288.12	chr2	-	6744	12	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1966084725354	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	1209	False	NA	-5	True	AATAAA	-15	NA	5680825	5298273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306349_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5574378_5574479_5680724
ES.18288.13	chr2	-	3810	5	ISM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	362932	-3284	362932	-2146	3prime_fragment	FALSE	canonical	3	40	junction_3	5.40254569624358	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGGAAAAGCCCACCCA	NA	False	NA	NA	False	NA	NA	NA	5317925	5300413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899
ES.18288.14	chr2	-	3283	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	-15	-1973	-15	1973	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGAGTCATCGTGGTC	1162	False	NA	NA	False	AATAAA	-18	NA	5680872	5301724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.15	chr2	-	3422	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	6118	1969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.1170716943246	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTAAGAGTCATCGT	7295	False	NA	NA	False	AATAAA	-14	NA	5674739	5301728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5674448
ES.18288.16	chr2	-	1741	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	38	-484	38	484	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTGCACTTGTTACTT	1215	False	NA	NA	False	NA	NA	NA	5680819	5303213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.17	chr2	-	1572	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	43	-320	43	320	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGATGTGTCCTTTT	1220	False	NA	NA	False	TTTAAA	-38	NA	5680814	5303377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.18	chr2	-	1603	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	-9	58	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	16.2160414404996	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGATGTGTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	5719335	5303639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
ES.18288.19	chr2	-	2456	8	ISM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	-20	16210	-20	-10780	5prime_fragment	FALSE	canonical	3	18	junction_7	12.8444381674223	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5719346	5314477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
ES.18288.20	chr2	-	7257	2	ISM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	357105	10780	357105	-10780	internal_fragment	FALSE	canonical	3	47	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5323752	5314477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5315882_5317899
ES.18288.21	chr2	-	2128	7	NNC	ENSMUSG00000039145.17	novel	376	3	NA	NA	-17	-21694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9450634382434	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATAGTTGAAATTGT	1160	False	NA	NA	False	AGTAAA	-18	NA	5680874	5325391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5326821_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.22	chr2	-	5358	1	Intergenic	novelGene_15173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAAAATCACCATG	NA	False	NA	NA	False	NA	NA	NA	5341835	5336477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5336500_5341800
ES.18288.23	chr2	-	1873	1	Intergenic	novelGene_15175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5517323	5515450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5515400_5517300
ES.18288.24	chr2	-	3121	1	Intergenic	novelGene_15177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGCGCTCTTAGTTACA	9150	False	NA	NA	False	NA	NA	NA	5661146	5658025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5658000_5661100
ES.18288.3	chr2	-	5740	1	NIC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	376848	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTGTCTGTTTCC	2482	False	NA	-1	True	AATAAA	-19	NA	5304009	5298269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5298300_5304000
ES.18288.4	chr2	-	4715	2	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	365275	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTGTCTGTTTCC	NA	False	NA	-1	True	AATAAA	-19	NA	5315582	5298269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5302049_5314646
ES.18288.5	chr2	-	6675	11	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.5128978595232	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTGTCTGTTTCC	1219	False	NA	-1	True	AATAAA	-19	NA	5680815	5298269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359601_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.7	chr2	-	6998	11	FSM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	-39	3	-39	-3	multi-exon	FALSE	canonical	3	18	junction_10	11.2977873939989	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGGGTTGTCTGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	5719365	5298270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
ES.18288.8	chr2	-	6704	11	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	-28	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.0900590427755	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	1149	False	NA	-5	True	AATAAA	-15	NA	5680885	5298273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306349_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ES.18288.9	chr2	-	6652	11	NNC	ENSMUSG00000039145.17	novel	6962	11	NA	NA	5746	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.566297554724	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTGGGTTGTCTGT	6923	False	NA	-5	True	AATAAA	-15	NA	5675111	5298273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5675049
ES.18289.1	chr2	+	852	1	Intergenic	novelGene_15180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	5823093	5823945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5823100_5823900
ES.18289.2	chr2	+	1584	1	Intergenic	novelGene_15181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTAATGCTTTTGCT	NA	False	NA	NA	False	AAGAAA	-11	NA	5823093	5824677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5823100_5824700
ES.18289.3	chr2	+	175	1	Intergenic	novelGene_15182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTACCA	NA	False	NA	NA	False	NA	NA	NA	5823565	5823740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5823600_5823700
ES.1829.1	chr1	-	496	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCCATTGTAATAGATA	1170	False	NA	NA	False	NA	NA	NA	167272355	167271859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167271900_167272400
ES.18290.1	chr2	+	3937	1	Antisense	novelGene_ENSMUSG00000039128.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	125	False	NA	NA	False	NA	NA	NA	5845164	5849101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_5845200_5849100
ES.18291.1	chr2	+	3729	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-42	-1079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGGGTGGTGTCAAAT	1660	False	NA	4	True	AATAAA	-11	NA	5849787	5875627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.10	chr2	+	1576	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1722	False	NA	NA	False	NA	NA	NA	5849849	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
ES.18291.11	chr2	+	3216	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	5	-1530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCACTGTGTCGTTTCCT	1722	False	NA	29	True	AATATA	-34	NA	5849849	5875176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.12	chr2	+	3641	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	24	-1075	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGGTGTCAAATGAAG	1741	False	NA	8	True	AATAAA	-15	NA	5849868	5875631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
ES.18291.13	chr2	+	3047	8	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	26	4	intron_retention	FALSE	canonical	2	4	junction_6	247.812634949908	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1743	False	NA	NA	False	NA	NA	NA	5849870	5873551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5868486_5869157_5869578_5871164_5871219_5872899
ES.18291.14	chr2	+	2701	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_3	345.275162008506	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1912	False	NA	NA	False	NA	NA	NA	5850039	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5862603_5862684_5865837_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.16	chr2	+	3598	11	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-2	-1075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	345.707043607734	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGGTGTCAAATGAAG	1934	False	NA	8	True	AATAAA	-15	NA	5850061	5875631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852918_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5869519_5869582_5871159_5871219_5872899
ES.18291.18	chr2	+	3523	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-1	-1077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	320.9755192388	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGTGGTGTCAAATGA	1935	False	NA	6	True	AATAAA	-13	NA	5850062	5875629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869268_5871164_5871219_5872899
ES.18291.19	chr2	+	709	1	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	-11458	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	1937	False	NA	NA	False	NA	NA	NA	5850064	5850773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5850100_5850800
ES.18291.2	chr2	+	1692	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	297.005466134178	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1673	False	NA	NA	False	NA	NA	NA	5849800	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5869519_5869582_5871159_5871219_5872899
ES.18291.20	chr2	+	873	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	-488	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTCAGTGTATTCAATT	1937	False	NA	NA	False	AATGAA	-15	NA	5850064	5873059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
ES.18291.21	chr2	+	1297	8	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	347.073832055889	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGAAGACTTGGGG	1937	False	NA	NA	False	NA	NA	NA	5850064	5873543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860800_5860859_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
ES.18291.22	chr2	+	2600	8	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_6	254.644530148782	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1937	False	NA	NA	False	NA	NA	NA	5850064	5873551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.23	chr2	+	5868	4	NNC	ENSMUSG00000025817.13	novel	1677	3	NA	NA	2	-1075	intron_retention	FALSE	non_canonical	0	0	junction_3	306.742381957383	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGGTGTCAAATGAAG	1938	False	NA	8	True	AATAAA	-15	NA	5850065	5875631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5861168_5870374
ES.18291.24	chr2	+	1664	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	15	306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGTAGCTACTTGTG	1951	False	NA	NA	False	AATACA	-16	NA	5850078	5873853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.25	chr2	+	4929	7	ISM	ENSMUSG00000025817.13	ENSMUST00000179748.8	1590	10	234	4	15	-4	intron_retention	FALSE	canonical	3	607	junction_1	61.4855448233341	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGAAGACTTGGGG	1951	False	NA	NA	False	NA	NA	NA	5850078	5873543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157
ES.18291.26	chr2	+	3544	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	15	-1081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	348.280786396321	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGGGTGGTGTCAA	1951	False	NA	2	True	AATAAA	-9	NA	5850078	5875625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5858323_5858428_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868490_5869157_5869271_5871164_5871219_5872899
ES.18291.28	chr2	+	3072	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	15	4	intron_retention	FALSE	non_canonical	0	0	junction_7	239.550490502524	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1951	False	NA	NA	False	NA	NA	NA	5850078	5873551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5870210_5870393_5871219_5872899
ES.18291.29	chr2	+	894	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-16	-425	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	239.228675904458	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATGCATGTGGTATGG	1957	False	NA	NA	False	CATAAA	-23	NA	5850084	5873122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869238_5871164_5871219_5872899
ES.18291.3	chr2	+	1700	10	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	320.9755192388	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1679	False	NA	NA	False	NA	NA	NA	5849806	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.30	chr2	+	3310	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-14	-4	intron_retention	FALSE	canonical	3	66	junction_2	285.090226945786	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGAAGACTTGGGG	1959	False	NA	NA	False	NA	NA	NA	5850086	5873543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5871219_5872899
ES.18291.33	chr2	+	819	3	FSM	ENSMUSG00000025817.13	ENSMUST00000138549.8	1677	3	33	825	-4	-825	multi-exon	FALSE	canonical	3	607	junction_1	40	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTTACAACTTTGTAAT	1969	False	NA	NA	False	AGTAAA	-13	NA	5850096	5861406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_5850197_5859626_5859730_5860790
ES.18291.34	chr2	+	2131	8	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-4	-433	intron_retention	FALSE	canonical	0	0	junction_6	254.644530148782	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCACAGATGCATG	1969	False	NA	NA	False	CATAAA	-15	NA	5850096	5873114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.36	chr2	+	1448	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	607	junction_1	58.7319121091762	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1971	False	NA	NA	False	NA	NA	NA	5850098	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871043_5871219_5872899
ES.18291.37	chr2	+	3730	7	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	4	4	intron_retention	FALSE	canonical	0	0	junction_5	266.322746973584	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	1977	False	NA	NA	False	NA	NA	NA	5850104	5873551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.39	chr2	+	1344	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	16	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	320.803851459285	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACATGGCAAGCAAAAGAA	1989	False	NA	NA	False	NA	NA	NA	5850116	5873534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869238_5871164_5871219_5872899
ES.18291.4	chr2	+	1712	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	330.348002066209	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAAGACTTGGGGGTT	1679	False	NA	NA	False	NA	NA	NA	5849806	5873546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5852918_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.40	chr2	+	3217	7	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	7843	-1081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	274.904629927463	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGGGTGGTGTCAA	7937	False	NA	2	True	AATAAA	-9	NA	5860788	5875625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.41	chr2	+	3960	4	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	14109	4	intron_retention	FALSE	non_canonical	0	0	junction_2	349.420790579051	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTTGGGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5867054	5873551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5868486_5869157_5870210_5870393_5871219_5872899
ES.18291.5	chr2	+	1628	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1681	False	NA	NA	False	NA	NA	NA	5849808	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.6	chr2	+	1427	9	NNC	ENSMUSG00000025817.13	novel	1590	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	311.915828990771	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1697	False	NA	NA	False	NA	NA	NA	5849824	5873547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850012_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.7	chr2	+	2771	8	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-5	-11	intron_retention	FALSE	canonical	0	0	junction_6	249.178896475965	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGGCAAGCAAAAGAAGA	1697	False	NA	NA	False	NA	NA	NA	5849824	5873536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5868486_5869157_5869271_5871164_5871219_5872899
ES.18291.8	chr2	+	1112	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	-5	-485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.550490502524	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGTGTATTCAATTAAG	1712	False	NA	NA	False	AATGAA	-18	NA	5849839	5873062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ES.18292.1	chr2	+	2114	1	Genic_Genomic	ENSMUSG00000025817.13	novel	NA	NA	NA	NA	22967	1320	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTGTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	5875912	5878026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_5875900_5878000
ES.18293.1	chr2	+	10505	5	Antisense	novelGene_ENSMUSG00000025815.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	5922830	5939346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_5924449_5926474_5926646_5928677_5929412_5929964_5935800_5937199
ES.18293.2	chr2	+	5053	3	Antisense	novelGene_ENSMUSG00000025815.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACCAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	5922830	5928277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_5927472_5927724_5928061_5928201
ES.18294.1	chr2	+	195	1	Intergenic	novelGene_15187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGTAGAACAAAGAAGTTG	755	False	NA	40	True	NA	NA	NA	5952333	5952528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_5952300_5952500
ES.18295.1	chr2	+	5237	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	-61	-2	-61	2	multi-exon	TRUE	canonical	3	171	junction_5	24.2975694686972	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTATTTGGTTG	1617	False	NA	19	True	AATAAA	-23	NA	5956218	6061516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.10	chr2	+	5113	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	51.5654322356838	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1667	False	NA	12	True	AATAAA	-16	NA	5956268	6061509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023747_6023813_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.11	chr2	+	8758	11	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-5	-38679	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	77.1368264838527	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGTAATTGATGTC	1673	False	NA	NA	False	NA	NA	NA	5956274	6021634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125
ES.18295.12	chr2	+	5127	22	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	52.6756644341841	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1681	False	NA	12	True	AATAAA	-16	NA	5956282	6061509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044958_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.13	chr2	+	8962	21	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	9	6	9	-1	intron_retention	FALSE	canonical	3	171	junction_5	24.8786555102964	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	1687	False	NA	11	True	AATAAA	-15	NA	5956288	6061508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319
ES.18295.16	chr2	+	4957	20	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	65.4189566501689	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTGGCATGATTTGTT	1688	False	NA	8	True	AATAAA	-12	NA	5956289	6061505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.17	chr2	+	3996	20	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.9028353515544	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGCATGATTTGTTT	1688	False	NA	9	True	AATAAA	-13	NA	5956289	6061506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5956365_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.22	chr2	+	6062	9	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	21	-63082	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	84.8446190102826	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1699	False	NA	NA	False	NA	NA	NA	5956300	5997231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197
ES.18295.24	chr2	+	3645	13	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	63.9623912936344	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	1700	False	NA	11	True	AATAAA	-15	NA	5956301	6061508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993230_6045288_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.25	chr2	+	5100	22	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	62.41220591128	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGATTTGTTTTAT	1708	False	NA	12	True	AATAAA	-16	NA	5956309	6061509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060279
ES.18295.28	chr2	+	5763	22	NNC	ENSMUSG00000043241.15	novel	2826	11	NA	NA	479	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	48.5656859350317	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	2157	False	NA	17	True	AATAAA	-21	NA	5956758	6061514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.30	chr2	+	5402	1	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	35578	-63054	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAAGAAGAGAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	5991857	5997259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_5991900_5997300
ES.18295.31	chr2	+	3590	17	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-34916	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.3047566874257	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGCATGATTTGTTT	NA	False	NA	9	True	AATAAA	-13	NA	5993233	6061506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5993284_6008355_6008465_6010521_6010658_6011332_6011512_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.32	chr2	+	4097	7	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	36974	26154	-34896	-24953	intron_retention	FALSE	canonical	3	173	junction_2	29.3792254644143	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCATTATCTCCTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	5993253	6035360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023
ES.18295.33	chr2	+	4285	1	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-20156	-48035	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTTTTATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	6007993	6012278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6008000_6012300
ES.18295.34	chr2	+	4286	1	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-19704	-47582	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAAAGATTTATGTG	NA	False	NA	NA	False	NA	NA	NA	6008445	6012731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6008400_6012700
ES.18295.35	chr2	+	179	1	Intergenic	novelGene_15196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	6016408	6016587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_6016400_6016600
ES.18295.36	chr2	+	7556	7	NIC	ENSMUSG00000043241.15	novel	2826	11	NA	NA	4488	-1	intron_retention	FALSE	canonical	3	51	junction_4	69.8641538988343	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	NA	False	NA	11	True	AATAAA	-15	NA	6032637	6061508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319
ES.18295.4	chr2	+	5961	8	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	-51	64262	-51	-63061	5prime_fragment	FALSE	canonical	3	171	junction_5	20.8767031567218	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAGGAAGAAGAGA	1627	False	NA	NA	False	NA	NA	NA	5956228	5997252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197
ES.18295.5	chr2	+	5416	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	70.0875632971044	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1627	False	NA	17	True	AATAAA	-21	NA	5956228	6061514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.8	chr2	+	5112	22	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.7704565873309	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCATGATTTGTTTT	1665	False	NA	10	True	AATAAA	-14	NA	5956266	6061507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987870_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18295.9	chr2	+	5174	22	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	52.7469034888722	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	1666	False	NA	11	True	AATAAA	-15	NA	5956267	6061508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038928_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ES.18296.1	chr2	-	1633	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	194	0	-29	0	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTCTCTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5849781	5799104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.10	chr2	-	1137	11	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-35	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	337.649655708398	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAAGCCTACTGTGAT	NA	False	NA	-9	True	AATAAA	-13	NA	5849787	5799477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5838466_5838525_5846763_5846836_5849645
ES.18296.11	chr2	-	6018	1	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-2088	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGGAAGCCTACTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	5805497	5799479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799500_5805500
ES.18296.12	chr2	-	1233	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-39	-6	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGGAAGCCTACTG	NA	False	NA	-13	True	AATAAA	-9	NA	5849791	5799481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ES.18296.13	chr2	-	1019	10	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-20	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	350.193420981556	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGGAAGCCTACTG	NA	False	NA	-13	True	AATAAA	-9	NA	5849772	5799481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.14	chr2	-	1898	11	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-36	-6	intron_retention	FALSE	canonical	3	91	junction_8	310.155122479059	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGGAAGCCTACTG	NA	False	NA	-13	True	AATAAA	-9	NA	5849788	5799481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ES.18296.17	chr2	-	1121	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-17	-6	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	319.998605368862	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGGAAGCCTACTG	NA	False	NA	-13	True	AATAAA	-9	NA	5849769	5799481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.18	chr2	-	1235	13	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-26	-34	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	308.731668371671	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACATAATAAA	NA	False	NA	-41	True	AAAAAG	-23	NA	5849778	5799509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827902_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.2	chr2	-	2303	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-31	0	intron_retention	FALSE	canonical	3	980	junction_4	86.4216073379571	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTCTCTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5849783	5799104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.20	chr2	-	1886	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-19	-34	intron_retention	FALSE	canonical	3	980	junction_4	86.4216073379571	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACATAATAAA	NA	False	NA	-41	True	AAAAAG	-23	NA	5849771	5799509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.21	chr2	-	755	7	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-36	-34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	427.27703737349	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACATAATAAA	NA	False	NA	-41	True	AAAAAG	-23	NA	5849788	5799509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.22	chr2	-	1223	13	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-7	-34	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	306.508790883539	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACATAATAAA	NA	False	NA	-41	True	AAAAAG	-23	NA	5849759	5799509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5799692_5800342_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.23	chr2	-	1313	13	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-19	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	448.852696388866	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAACATAATAAA	NA	False	NA	-41	True	AAAAAG	-23	NA	5849771	5799509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849443_5849572_5849645
ES.18296.24	chr2	-	758	8	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-1	-12	combination_of_known_splicesites	FALSE	canonical	3	91	junction_5	366.119362715361	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGTGGACATCACTC	NA	False	NA	NA	False	AATAAA	-8	NA	5849753	5809652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ES.18296.25	chr2	-	1286	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-19	281	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTGTCTATATGGAA	NA	False	NA	NA	False	ACTAAA	-28	NA	5849771	5814084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.26	chr2	-	1004	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTCATCATTGCTTTT	NA	False	NA	0	True	AATACA	-16	NA	5849772	5814367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.27	chr2	-	969	7	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	-19	-3	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	504.16983470079	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTCATCATTGCTTT	NA	False	NA	-1	True	AATACA	-15	NA	5849771	5814368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
ES.18296.28	chr2	-	765	7	NNC	ENSMUSG00000039128.14	novel	562	5	NA	NA	-20	789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	425.493700175324	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATATAGAATTACTG	NA	False	NA	NA	False	AATAAA	-32	NA	5849772	5825146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5825419_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.29	chr2	-	1117	5	FSM	ENSMUSG00000039128.14	ENSMUST00000150876.2	562	5	-105	-450	-15	450	multi-exon	FALSE	canonical	3	1033	junction_1	96.4507646418627	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTATTGTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	5849767	5827176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.3	chr2	-	7546	12	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_3	320.522971417981	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTCTCTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5849770	5799104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5799692_5800359_5800498_5803171_5807116_5807583_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.30	chr2	-	1541	6	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-8	-3669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	603.640422768389	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCTTTGTGGTTCTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	5849760	5831295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5832415_5833398_5833475_5837891_5837993_5838466_5838525_5846763_5846836_5849645
ES.18296.31	chr2	-	172	1	Intergenic	novelGene_15183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAATGT	2411	False	NA	NA	False	NA	NA	NA	5842540	5842368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5842400_5842500
ES.18296.4	chr2	-	1492	11	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	337.649655708398	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCTTGCTCTCTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	5849770	5799105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5838466_5838525_5846763_5846836_5849645
ES.18296.5	chr2	-	1891	3	FSM	ENSMUSG00000039128.14	ENSMUST00000130142.2	592	3	-1298	-1	-1298	1	multi-exon	FALSE	canonical	3	991	junction_2	39.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCTACTGTGATGGT	NA	False	NA	-6	True	AATAAA	-16	NA	5804707	5799474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5799692_5800359_5800498_5803171
ES.18296.6	chr2	-	1310	14	NNC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	386.679277832838	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849771	5799475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5841080_5841139_5846763_5846836_5849645
ES.18296.7	chr2	-	1495	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	-39	371	-39	0	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5850014	5799475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.8	chr2	-	2965	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	980	junction_5	82.2429378515036	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849765	5799475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18296.9	chr2	-	3763	13	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	289.405376975312	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAAGCCTACTGTGATG	NA	False	NA	-8	True	AATAAA	-14	NA	5849771	5799476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ES.18297.1	chr2	-	180	1	Intergenic	novelGene_15184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCTTTCAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	5870390	5870210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5870200_5870400
ES.18298.1	chr2	-	6372	1	Genic_Genomic	ENSMUSG00000025816.16	novel	NA	NA	NA	NA	638	1536	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAATTAACTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	5880633	5874261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_5874300_5880600
ES.18298.10	chr2	-	2299	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	111.379576224728	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCTCTAAGAGTATT	NA	False	NA	-14	True	AATAAA	-13	NA	5900153	5875794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881170_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5897964_5898033_5900067
ES.18298.11	chr2	-	2495	13	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	105.759948310628	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCTCTAAGAGTAT	NA	False	NA	-15	True	AATAAA	-12	NA	5900180	5875795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5884403_5884512_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.12	chr2	-	2554	12	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	85.5748669367337	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCTCTAAGAGTAT	NA	False	NA	-15	True	AATAAA	-12	NA	5900180	5875795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882498_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.13	chr2	-	2294	12	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	85.0211446719127	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTGCAGTTGTGAT	NA	False	NA	-56	True	AATAAA	-12	NA	5900136	5875836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891393_5896112_5896167_5897964_5898033_5900067
ES.18298.14	chr2	-	4509	9	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	14	junction_3	96.8935466117326	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTTGCAGTTGTG	NA	False	NA	-58	True	AATAAA	-10	NA	5900147	5875838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.15	chr2	-	4149	10	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-49	1	intron_retention	FALSE	canonical	3	14	junction_4	91.3527959798349	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTTGCAGTTGTG	NA	False	NA	-58	True	AATAAA	-10	NA	5900194	5875838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5879037_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.16	chr2	-	2074	11	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.196213363431	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	False	NA	-59	True	AATAAA	-9	NA	5900137	5875839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5879158_5881174_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.17	chr2	-	2276	9	NIC	ENSMUSG00000025816.16	novel	2110	11	NA	NA	3700	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	120.751552785047	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	False	NA	-59	True	AATAAA	-9	NA	5896430	5875839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881170_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100
ES.18298.18	chr2	-	2197	12	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.7288926854614	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	False	NA	-59	True	AATAAA	-9	NA	5900190	5875839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5879074_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.19	chr2	-	4441	2	NIC	ENSMUSG00000025816.16	novel	1303	6	NA	NA	5559	37	intron_retention	FALSE	canonical	3	272	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAACAGCTGTCA	795	False	NA	NA	False	NA	NA	NA	5894571	5886581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5887761_5891309
ES.18298.2	chr2	-	6473	4	Antisense	novelGene_ENSMUSG00000043241.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAATTAACTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	6019568	5874261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_5874326_6005901_6008465_6015125_6016401_6016997
ES.18298.20	chr2	-	1402	6	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-80	3922	33	31	5prime_fragment	FALSE	canonical	3	245	junction_1	28.7193314685422	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	5900210	5886587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.21	chr2	-	3204	6	NNC	ENSMUSG00000025816.16	novel	1303	6	NA	NA	-43	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.035783857524	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	5900188	5886587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898802_5899012
ES.18298.22	chr2	-	7204	3	ISM	ENSMUSG00000025816.16	ENSMUST00000194565.2	1303	6	2674	-27	2659	27	intron_retention	FALSE	canonical	3	245	junction_1	13.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5897471	5886591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5887502_5887628_5887761_5891309
ES.18298.23	chr2	-	3308	5	NNC	ENSMUSG00000025816.16	novel	1303	6	NA	NA	-24	27	intron_retention	FALSE	non_canonical	0	0	junction_4	126.943885240684	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5900169	5886591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5887761_5891309_5891389_5896100_5896167_5897964_5898802_5899012
ES.18298.24	chr2	-	3784	1	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-7193	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	4991	False	NA	NA	False	NA	NA	NA	5890375	5886591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5886600_5890400
ES.18298.25	chr2	-	4753	5	NNC	ENSMUSG00000025816.16	novel	1303	6	NA	NA	187	27	intron_retention	FALSE	non_canonical	0	0	junction_4	122.00691578759	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5899943	5886591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5898802_5899012
ES.18298.26	chr2	-	494	5	ISM	ENSMUSG00000025816.16	ENSMUST00000026926.5	756	8	-55	4932	-40	-979	5prime_fragment	FALSE	canonical	3	272	junction_1	20.6397674405503	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGAGTATGTTTGTG	NA	False	NA	NA	False	ATTAAA	-11	NA	5900185	5887597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.27	chr2	-	4961	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	38	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTTATGTTTTCCAT	NA	False	NA	0	True	AATAAA	-31	NA	5947590	5900887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.28	chr2	-	4979	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTACTCAAATTTCTT	NA	False	NA	-11	True	AATAAA	-20	NA	5947590	5900898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.29	chr2	-	5047	15	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	316	27	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.0317940214124	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTACTCAAATTTCTT	7421	False	NA	-11	True	AATAAA	-20	NA	5935351	5900898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908777_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448
ES.18298.3	chr2	-	2433	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	29	-14	29	14	multi-exon	TRUE	canonical	3	221	junction_3	37.3630833845388	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTATTTCTGTAGGTTC	NA	False	NA	-3	True	AATAAA	-24	NA	5900214	5875783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.30	chr2	-	4987	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTACTCAAATTTCTT	NA	False	NA	-11	True	AATAAA	-20	NA	5947590	5900898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902846_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.31	chr2	-	4979	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	5	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.16875907233	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTTTACTCAAATTTC	NA	False	NA	-13	True	AATAAA	-18	NA	5947598	5900900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926638_5928675_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.32	chr2	-	4906	17	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	-7	25	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.6643878817389	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTTTACTCAAATTTC	NA	False	NA	-13	True	AATAAA	-18	NA	5947610	5900900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5908777_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.33	chr2	-	5137	19	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	11	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.8563514110227	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATTTTACTCAAATTT	NA	False	NA	-14	True	AATAAA	-17	NA	5947592	5900901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5910506_5910666_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.34	chr2	-	4975	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATTTTACTCAAATTT	NA	False	NA	-14	True	AATAAA	-17	NA	5947590	5900901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.35	chr2	-	4840	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	7	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATTTTACTCAAATTT	NA	False	NA	-14	True	AATAAA	-17	NA	5947596	5900901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902336_5902992_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.36	chr2	-	5477	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	26	-23	-23	23	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCATTTTACTCAAATT	NA	False	NA	-15	True	AATAAA	-16	NA	5947577	5900902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.4	chr2	-	4417	12	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-16	10	intron_retention	FALSE	canonical	0	0	junction_5	113.362943790259	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGAGTATTTCTGTAG	NA	False	NA	-7	True	AATAAA	-20	NA	5900161	5875787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5881373_5881651_5881813_5882665_5882820_5884272_5884369_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.40	chr2	-	2740	7	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	1502	21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.8053255472653	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCATTTTACTCAAA	NA	False	NA	-17	True	AATAAA	-14	NA	5915145	5900904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902334_5902849_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112
ES.18298.41	chr2	-	5071	19	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-4	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.8563514110227	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCATTTTACTCAAA	NA	False	NA	-17	True	AATAAA	-14	NA	5947558	5900904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5910506_5910666_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.42	chr2	-	4844	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	17	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCATTTTACTCAAA	NA	False	NA	-17	True	AATAAA	-14	NA	5947586	5900904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902979_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.43	chr2	-	5898	17	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	22	21	intron_retention	FALSE	non_canonical	0	0	junction_1	18.1666547209441	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCATTTTACTCAAA	NA	False	NA	-17	True	AATAAA	-14	NA	5947581	5900904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908777_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5935798_5937197_5937354_5947325
ES.18298.44	chr2	-	5212	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	20	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAACCATTTTACTCAA	NA	False	NA	-18	True	AATAAA	-13	NA	5947583	5900905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902421_5902688_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.45	chr2	-	6147	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	20	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.16875907233	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAACCATTTTACTCA	NA	False	NA	-19	True	AATAAA	-12	NA	5947583	5900906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5927832_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.46	chr2	-	4956	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-23	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAAGAACCATTTTACT	NA	False	NA	-21	True	AATAAA	-10	NA	5947577	5900908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902379_5902893_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.47	chr2	-	4831	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-2	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947605	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902388_5902931_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.48	chr2	-	5734	17	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	-12	-107	intron_retention	FALSE	canonical	0	0	junction_1	14.473979886334	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947566	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5935798_5937197_5937354_5947325
ES.18298.49	chr2	-	4864	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-7	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947610	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.5	chr2	-	6905	4	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-2036	9	intron_retention	FALSE	canonical	0	0	junction_3	145.828666591998	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGAGTATTTCTGTA	NA	False	NA	-8	True	AATAAA	-19	NA	5885218	5875788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5881373_5881651_5883748_5884272
ES.18298.50	chr2	-	4863	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	3	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947600	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902846_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.51	chr2	-	3126	11	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	-5899	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7268158449283	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	2724	False	NA	-4	True	ATTAAA	-22	NA	5922546	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483
ES.18298.52	chr2	-	4809	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.8560177599098	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947590	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908777_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.54	chr2	-	5382	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	-9	107	-9	-107	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATTATTCTTTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	5947612	5901032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.55	chr2	-	5246	15	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	-1149	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3348580210427	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACACATTATTCTTT	3798	False	NA	-8	True	ATTAAA	-18	NA	5930736	5901036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902340_5902855_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5929410_5929962
ES.18298.56	chr2	-	4841	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACACATTATTCTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	5947590	5901036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902897_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.57	chr2	-	4155	15	NNC	ENSMUSG00000025815.14	novel	5480	17	NA	NA	1074	-113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1780252002555	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGACACATTATTCT	8179	False	NA	-10	True	ATTAAA	-16	NA	5934593	5901038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902334_5902849_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448
ES.18298.58	chr2	-	4460	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	22	-454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATTTAATATATTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	5947581	5901379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902383_5902926_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.59	chr2	-	4498	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	13	-454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATTTAATATATTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	5947590	5901379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902369_5902883_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.6	chr2	-	7517	7	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-8155	5	intron_retention	FALSE	canonical	3	221	junction_3	36.3061825160521	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTCTAAGAGTATTTC	4029	False	NA	-12	True	AATAAA	-15	NA	5891337	5875792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5887502_5887628_5887761_5891309
ES.18298.60	chr2	-	4482	18	NNC	ENSMUSG00000025815.14	novel	3852	18	NA	NA	-23	-456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4538401405885	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGAATTTAATATATT	NA	False	NA	NA	False	ATTAAA	-16	NA	5947577	5901381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5902334_5902849_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.62	chr2	-	3938	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	-7	1549	-7	-486	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	5947610	5902474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.63	chr2	-	3401	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	24	2055	24	-992	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGATTGTATGGTCGTC	NA	False	NA	NA	False	AGTAAA	-17	NA	5947579	5902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.65	chr2	-	3038	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	34	2408	-15	-1345	multi-exon	FALSE	canonical	3	33	junction_14	8.78119439484174	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAGTGTTTGTTATGCT	NA	False	NA	NA	False	NA	NA	NA	5947569	5903333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ES.18298.66	chr2	-	1045	1	Intergenic	novelGene_15185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAGAGATAAATTTATG	NA	False	NA	NA	False	NA	NA	NA	5914090	5913045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5913000_5914100
ES.18298.67	chr2	-	1229	3	ISM	ENSMUSG00000025815.14	ENSMUST00000026924.7	3852	18	-36	33001	13	-5297	5prime_fragment	FALSE	canonical	3	50	junction_2	4	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGGATAGCATTAGACC	NA	False	NA	NA	False	AATAAA	-18	NA	5947590	5934989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_5935798_5937197_5937354_5947325
ES.18298.68	chr2	-	183	1	Intergenic	novelGene_15186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5950126	5949943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5949900_5950100
ES.18298.69	chr2	-	5426	8	Antisense	novelGene_ENSMUSG00000043241.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGAGGGCCCGCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	5996764	5956277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_5956363_5962279_5962657_5965739_5966522_5978277_5978439_5980713_5980912_5984582_5984733_5987800_5987905_5993195
ES.18298.7	chr2	-	2218	11	NIC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	41	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	84.6070919013294	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCTCTAAGAGTATT	NA	False	NA	-14	True	AATAAA	-13	NA	5900202	5875794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_5876833_5878553_5878631_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.70	chr2	-	207	1	Intergenic	novelGene_15188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCACAGATCATTAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	5968846	5968639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5968600_5968800
ES.18298.71	chr2	-	154	1	Intergenic	novelGene_15189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTCTTAAAAGAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	5975562	5975408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5975400_5975600
ES.18298.72	chr2	-	181	1	Intergenic	novelGene_15190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	5979991	5979810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5979800_5980000
ES.18298.73	chr2	-	224	1	Intergenic	novelGene_15191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTGCCTGACATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	5987279	5987055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5987100_5987300
ES.18298.74	chr2	-	177	1	Intergenic	novelGene_15192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAATAAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	5988774	5988597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5988600_5988800
ES.18298.75	chr2	-	175	2	Antisense	novelGene_ENSMUSG00000043241.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAACAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	5995177	5991424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_5991551_5995128
ES.18298.76	chr2	-	183	1	Intergenic	novelGene_15193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	5995180	5994997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_5995000_5995200
ES.18298.77	chr2	-	157	1	Intergenic	novelGene_15194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	6004654	6004497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6004500_6004700
ES.18298.78	chr2	-	1663	1	Intergenic	novelGene_15195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6007530	6005867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6005900_6007500
ES.18298.8	chr2	-	2671	13	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-43	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	122.720860990388	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCTCTAAGAGTATT	NA	False	NA	-14	True	AATAAA	-13	NA	5900188	5875794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882498_5882820_5884403_5884512_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ES.18298.9	chr2	-	3880	10	NNC	ENSMUSG00000025816.16	novel	2448	12	NA	NA	-45	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135.747132384509	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCTCTAAGAGTATT	NA	False	NA	-14	True	AATAAA	-13	NA	5900190	5875794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_5876833_5878553_5878631_5881170_5881373_5881651_5881813_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898802_5899012
ES.18299.1	chr2	-	157	1	Intergenic	novelGene_15197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6041973	6041816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6041800_6042000
ES.183.1	chr1	+	5638	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTTACTCAGCCCC	NA	False	NA	NA	False	NA	NA	NA	23321131	23326769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_23321100_23326800
ES.1830.1	chr1	-	158	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9860	False	NA	NA	False	NA	NA	NA	167298737	167298579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167298600_167298700
ES.18300.1	chr2	-	176	1	Intergenic	novelGene_15198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	6058946	6058770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6058800_6058900
ES.18301.1	chr2	+	176	1	Intergenic	novelGene_15199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGGAAAGAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	6077314	6077490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_6077300_6077500
ES.18302.1	chr2	-	3503	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	3	892	3	-892	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGACCCTGCTGTGTGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	6135019	6103309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
ES.18302.2	chr2	-	3821	4	ISM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	25	-2689	25	-894	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGACCCTGCTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	6134925	6103311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
ES.18302.3	chr2	-	2184	5	FSM	ENSMUSG00000045319.14	ENSMUST00000126551.2	945	5	-66	-1173	6	8	multi-exon	FALSE	canonical	0	0	junction_3	17.007351351695	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGTTAAATTTTTATAG	NA	False	NA	NA	False	NA	NA	NA	6135016	6104827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438_6134641_6134852
ES.18302.4	chr2	-	6256	4	ISM	ENSMUSG00000045319.14_ENSMUSG00000082332.3	ENSMUST00000126551.2	945	5	-3926	-1173	-109	8	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGTTAAATTTTTATAG	NA	False	NA	NA	False	NA	NA	NA	6138876	6104827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134438
ES.18302.5	chr2	-	2035	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	-47	2410	-47	8	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGTTAAATTTTTATAG	NA	False	NA	NA	False	NA	NA	NA	6135069	6104827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
ES.18302.7	chr2	-	3477	4	Fusion	ENSMUSG00000045319.14_ENSMUSG00000082332.3	novel	4398	4	NA	NA	-112	-20	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6138879	6104855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_6106172_6107623_6107877_6118703_6118925_6137192
ES.18302.8	chr2	-	2035	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	6	20	-1	-20	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6134951	6104855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
ES.18302.9	chr2	-	2300	1	Genic_Genomic	ENSMUSG00000082332.3	novel	NA	NA	NA	NA	-102	449	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGATGCAGGGAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	6138869	6136569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_6136600_6138900
ES.18303.1	chr2	+	1909	4	NNC	ENSMUSG00000102887.2	novel	2794	2	NA	NA	1236	1794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAAAGTATTG	NA	False	NA	NA	False	NA	NA	NA	6138929	6147173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6139027_6139703_6139788_6143932_6144098_6145610
ES.18303.2	chr2	+	156	1	Intergenic	novelGene_15200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGAGGT	NA	False	NA	NA	False	NA	NA	NA	6140419	6140575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_6140400_6140600
ES.18304.1	chr2	-	128	1	Intergenic	novelGene_15201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	6188977	6188849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6188800_6189000
ES.18305.1	chr2	-	1457	5	FSM	ENSMUSG00000039063.6	ENSMUST00000042658.5	1851	5	39	355	-15	-355	multi-exon	TRUE	canonical	0	0	junction_1	2.1650635094611	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGTCATTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	6217805	6193630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_6194463_6200393_6200595_6211225_6211324_6213278_6213401_6217601
ES.18305.2	chr2	-	2532	1	Intergenic	novelGene_15202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	8279	False	NA	NA	False	NA	NA	NA	6204760	6202228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6202200_6204800
ES.18306.1	chr2	-	172	1	Intergenic	novelGene_15203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATCCTTTT	8978	False	NA	NA	False	NA	NA	NA	6314185	6314013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6314000_6314200
ES.18307.1	chr2	+	4757	15	NNC	ENSMUSG00000039046.16	novel	704	3	NA	NA	-471	336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATTCAAAATCTATTTAT	4183	False	NA	NA	False	AATAAA	-31	NA	6327006	6448641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327128_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.10	chr2	+	4905	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-34	323	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	35.0102267392167	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4620	False	NA	NA	False	AATAAA	-18	NA	6327443	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.11	chr2	+	4862	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-34	323	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.0551241267734	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4620	False	NA	NA	False	AATAAA	-18	NA	6327443	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.12	chr2	+	4601	14	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.6996013767876	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTCTGTGTCTT	4626	False	NA	NA	False	NA	NA	NA	6327449	6448304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399393_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.13	chr2	+	4651	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.6309225276155	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTCTGTGTCTT	4626	False	NA	NA	False	NA	NA	NA	6327449	6448304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6397162_6397199_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.14	chr2	+	4286	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-28	3226	-28	-330	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCCTGACAGAATAACCA	4626	False	NA	NA	False	ATTAAA	-25	NA	6327449	6447975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.15	chr2	+	7470	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-25	1	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	35.0102267392167	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATGCAGCCTTGACTTAT	4629	False	NA	11	True	ATTAAA	-21	NA	6327452	6451202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.16	chr2	+	5105	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-25	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.4795898703784	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATTGACAAAGTGA	4629	False	NA	NA	False	AATAAA	-15	NA	6327452	6448625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6415662_6415835_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.17	chr2	+	4998	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-25	323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.6917181200708	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4629	False	NA	NA	False	AATAAA	-18	NA	6327452	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341299_6395831_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.18	chr2	+	4241	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	-331	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	35.0102267392167	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCCTGACAGAATAACC	4630	False	NA	NA	False	ATTAAA	-24	NA	6327453	6447974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.19	chr2	+	4811	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	299	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	35.840540993381	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAATGATAAGA	4630	False	NA	NA	False	TATAAA	-23	NA	6327453	6448604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6435236_6435390_6445171
ES.18307.2	chr2	+	7244	15	NNC	ENSMUSG00000039046.16	novel	704	3	NA	NA	-225	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGACTTATTTGTGGGA	4429	False	NA	19	True	ATTAAA	-29	NA	6327252	6451210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327292_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.20	chr2	+	4518	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.0008218183645	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATTTTGTTCTGTGTCT	4630	False	NA	NA	False	NA	NA	NA	6327453	6448303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.21	chr2	+	3948	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-24	3560	-24	-664	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACTGTCACCGAGACAC	4630	False	NA	NA	False	AAAAAG	-27	NA	6327453	6447641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.22	chr2	+	7350	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	33.5157674336523	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTCTGCGATGCAGCC	4630	False	NA	2	True	ATTAAA	-12	NA	6327453	6451193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171_6449194_6449343
ES.18307.24	chr2	+	2908	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-24	4600	-24	-1704	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTATGTTTATAATTGCC	4630	False	NA	NA	False	AATAGA	-16	NA	6327453	6446601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.25	chr2	+	5140	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	323	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	34.0225015577176	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4630	False	NA	NA	False	AATAAA	-18	NA	6327453	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6404885_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.26	chr2	+	4818	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	34.0225015577176	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTCTGTGTCTTCT	4630	False	NA	NA	False	NA	NA	NA	6327453	6448306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6404885_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.27	chr2	+	4671	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-20	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4634	False	NA	NA	False	AATAAA	-18	NA	6327457	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327506_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.28	chr2	+	7641	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	41.2485151247896	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGCGATGCAGCCTTG	4650	False	NA	5	True	ATTAAA	-15	NA	6327473	6451196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6414801_6414960_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.29	chr2	+	4459	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-24	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.4839240120431	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTCTGTGTCTTCT	4735	False	NA	NA	False	NA	NA	NA	6327558	6448306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.3	chr2	+	4994	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-80	2570	-80	326	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGACAAAGTGATTCAAA	4574	False	NA	NA	False	AATAAA	-21	NA	6327397	6448631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.30	chr2	+	7259	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	33.5157674336523	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4736	False	NA	10	True	ATTAAA	-20	NA	6327559	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171_6449188_6449330
ES.18307.31	chr2	+	4668	13	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-23	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.1149677803084	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATTGACAAAGTGA	4736	False	NA	NA	False	AATAAA	-15	NA	6327559	6448625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341264_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.32	chr2	+	4889	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-14	326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.1329113902923	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGACAAAGTGATTCAAA	4745	False	NA	NA	False	AATAAA	-21	NA	6327568	6448631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6341720_6341787_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.33	chr2	+	7263	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.0551241267734	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4792	False	NA	10	True	ATTAAA	-20	NA	6327615	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.34	chr2	+	7541	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	34.0225015577176	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4802	False	NA	10	True	ATTAAA	-20	NA	6327625	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6404885_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.35	chr2	+	4338	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	46	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	35.840540993381	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTCTGTGTCTTCT	4805	False	NA	NA	False	NA	NA	NA	6327628	6448306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6435236_6435390_6445171
ES.18307.36	chr2	+	4567	13	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	46	323	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	41.7169696353361	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4805	False	NA	NA	False	AATAAA	-18	NA	6327628	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.37	chr2	+	4954	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	47	316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.5365755560225	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAATAATATTGACAAA	4806	False	NA	NA	False	AATAAA	-11	NA	6327629	6448621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6413739_6413821_6414806_6414960_6415662_6415835_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.38	chr2	+	4431	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	49	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	34.689291413569	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATTTTGTTCTGTGTCT	4808	False	NA	NA	False	NA	NA	NA	6327631	6448303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435397_6445179
ES.18307.39	chr2	+	4740	15	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	52	299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	34.462638746732	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAATGATAAGA	4811	False	NA	NA	False	TATAAA	-23	NA	6327634	6448604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405080_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.4	chr2	+	7543	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-50	-9	-50	9	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGACTTATTTGTGGGA	4604	False	NA	19	True	ATTAAA	-29	NA	6327427	6451210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.40	chr2	+	10441	12	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	53	299	intron_retention	FALSE	canonical	3	91	junction_4	9.06359533135601	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAATGATAAGA	4812	False	NA	NA	False	TATAAA	-23	NA	6327635	6448604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.41	chr2	+	4877	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	62	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.5905571172244	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGACAAAGTGATTC	4821	False	NA	NA	False	AATAAA	-18	NA	6327644	6448628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6335774_6335908_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.43	chr2	+	4738	15	NNC	ENSMUSG00000039046.16	novel	704	3	NA	NA	443	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATTGACAAAGTGA	5202	False	NA	NA	False	AATAAA	-15	NA	6328025	6448625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6328144_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.44	chr2	+	4384	15	NNC	ENSMUSG00000039046.16	novel	704	3	NA	NA	473	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTATTTTGTTCTGTGT	5232	False	NA	NA	False	NA	NA	NA	6328055	6448301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6328144_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.45	chr2	+	4716	15	NNC	ENSMUSG00000039046.16	novel	704	3	NA	NA	12245	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6917181200708	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATTGACAAAGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	6339827	6448625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6339924_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.46	chr2	+	5093	14	ISM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	13228	2576	13123	320	3prime_fragment	FALSE	canonical	3	91	junction_3	19.4050563775979	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATTGACAAAGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	6340705	6448625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.47	chr2	+	6100	1	Intergenic	novelGene_15204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6380026	6386126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_6380000_6386100
ES.18307.48	chr2	+	2978	1	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-22562	-19675	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAGCTCTGAGAAAGCAAC	NA	False	NA	NA	False	ACTAAA	-16	NA	6403170	6406148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6403200_6406100
ES.18307.49	chr2	+	3583	8	NNC	ENSMUSG00000039046.16	novel	4340	14	NA	NA	34	299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	47.9246858122626	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAATGATAAGA	NA	False	NA	NA	False	TATAAA	-23	NA	6425766	6448604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435376_6445648
ES.18307.5	chr2	+	2992	6	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-49	-762	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	40.4029701878463	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGTTTGTTTCATACTT	4605	False	NA	NA	False	AAAAAG	-9	NA	6327428	6447543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6445171
ES.18307.50	chr2	+	5815	2	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	19517	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	NA	False	NA	10	True	ATTAAA	-20	NA	6445249	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6449194_6449330
ES.18307.51	chr2	+	2305	2	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	23026	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	NA	False	NA	10	True	ATTAAA	-20	NA	6448758	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6449193_6449330
ES.18307.6	chr2	+	4639	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	-49	2894	-49	2	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTCTGTGTCTTCTG	4605	False	NA	NA	False	NA	NA	NA	6327428	6448307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.7	chr2	+	5086	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-41	299	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	41.2485151247896	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAATGATAAGA	4613	False	NA	NA	False	TATAAA	-23	NA	6327436	6448604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6414801_6414960_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.8	chr2	+	4342	11	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.4560255091871	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTCTGTGTCTT	4613	False	NA	NA	False	NA	NA	NA	6327436	6448304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341257_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ES.18307.9	chr2	+	6304	16	NNC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	33.5157674336523	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4615	False	NA	10	True	ATTAAA	-20	NA	6327438	6451201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171_6446161_6447379
ES.18308.1	chr2	+	3782	1	Antisense	novelGene_ENSMUSG00000002107.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6628966	6632748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_6629000_6632700
ES.18309.1	chr2	+	156	1	Intergenic	novelGene_15208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGTAATAATCCAA	NA	False	NA	NA	False	NA	NA	NA	6756885	6757041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_6756900_6757000
ES.1831.1	chr1	-	173	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	167477599	167477426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_167477400_167477600
ES.18310.1	chr2	-	5662	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	7.26912901841689	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTCTCTGCGTG	7758	False	NA	0	True	ATTAAA	-15	NA	6877503	6546679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.10	chr2	-	2799	14	NIC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	-94	64	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	6.4284868971619	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCAGACTAAGTTTTG	7759	False	NA	NA	False	NA	NA	NA	6877502	6549553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.11	chr2	-	2417	13	NNC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-27342	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.85901110765	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCAGACTAAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	6754369	6549553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_6550487_6551852_6552025_6558595_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6754277
ES.18310.12	chr2	-	2510	14	NNC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-27338	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.69963093301422	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6754365	6549582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6754277
ES.18310.13	chr2	-	2915	14	NNC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	-27339	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.1638600688218	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAGAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	6754366	6549584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6753883
ES.18310.14	chr2	-	7130	8	ISM	ENSMUSG00000002107.19	ENSMUST00000114927.9	1721	14	112501	-858	6753	30	intron_retention	FALSE	canonical	3	17	junction_6	5.35666664550076	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAGAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6614238	6549587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834
ES.18310.15	chr2	-	2644	13	NIC	ENSMUSG00000002107.19	novel	1996	14	NA	NA	-94	-24	intron_retention	FALSE	canonical	3	17	junction_5	6.64736790015417	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGGCCTGTAAATTTT	7759	False	NA	NA	False	NA	NA	NA	6877502	6551074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.16	chr2	-	1237	9	ISM	ENSMUSG00000002107.19	ENSMUST00000183984.8	1996	14	106	38916	106	4	5prime_fragment	FALSE	canonical	3	17	junction_1	7.29725975966321	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTCACAGTCTCTTT	7959	False	NA	NA	False	CATAAA	-20	NA	6877302	6590585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.17	chr2	-	160	1	Intergenic	novelGene_15205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATTAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	6605483	6605323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6605300_6605500
ES.18310.18	chr2	-	3269	1	Intergenic	novelGene_15206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	6616285	6613016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6613000_6616300
ES.18310.19	chr2	-	259	1	Intergenic	novelGene_15207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTCAGCACAGCCTC	NA	False	NA	NA	False	NA	NA	NA	6753315	6753056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_6753100_6753300
ES.18310.2	chr2	-	5654	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	6.4284868971619	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTCTCTGCGTG	7778	False	NA	0	True	ATTAAA	-15	NA	6877483	6546679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.3	chr2	-	5350	13	NIC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	45	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.59021492054387	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTTGTTTCTCTCTCTG	7898	False	NA	-4	True	ATTAAA	-11	NA	6877363	6546683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.4	chr2	-	5800	14	NNC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	-27323	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.1638600688218	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTTGTTTCTCTCTCTG	NA	False	NA	-4	True	ATTAAA	-11	NA	6754350	6546683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6753883
ES.18310.5	chr2	-	3894	13	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-9	23	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	9.86118935806202	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTCCTTCCAGCACGC	7844	False	NA	NA	False	NA	NA	NA	6877417	6548217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.6	chr2	-	4124	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-95	23	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	7.26912901841689	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTCCTTCCAGCACGC	7758	False	NA	NA	False	NA	NA	NA	6877503	6548217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.7	chr2	-	3874	15	NNC	ENSMUSG00000002107.19	novel	2525	15	NA	NA	-27336	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.1513246216011	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6754363	6548242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6753883_6753910_6754277
ES.18310.8	chr2	-	2518	13	NIC	ENSMUSG00000002107.19	novel	1721	14	NA	NA	43	64	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	9.32142096940637	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCAGACTAAGTTTTG	7896	False	NA	NA	False	NA	NA	NA	6877365	6549553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6558595_6558776_6565469_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18310.9	chr2	-	2788	14	NIC	ENSMUSG00000002107.19	novel	5470	14	NA	NA	-95	64	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	7.26912901841689	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCAGACTAAGTTTTG	7758	False	NA	NA	False	NA	NA	NA	6877503	6549553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6877166
ES.18311.1	chr2	+	200	1	Intergenic	novelGene_15209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGAGAAAGGATTGTT	NA	False	NA	NA	False	NA	NA	NA	7780526	7780726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_7780500_7780700
ES.18312.1	chr2	-	2989	6	FSM	ENSMUSG00000015619.11	ENSMUST00000102976.4	3215	6	-6	232	-6	-232	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCGGTACCTGTCTTTTT	6613	False	NA	NA	False	ATTAAA	-15	NA	9883417	9862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9863466_9867905_9868032_9873571_9873718_9879199_9879737_9882162_9882796_9883215
ES.18313.1	chr2	+	214	1	Intergenic	novelGene_15210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGGGGGTCACCACAG	NA	False	NA	NA	False	NA	NA	NA	9905052	9905266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_9905100_9905300
ES.18314.1	chr2	+	160	1	Intergenic	novelGene_15211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAAAATTCT	2848	False	NA	NA	False	NA	NA	NA	9909135	9909295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_9909100_9909300
ES.18315.1	chr2	+	2647	1	Intergenic	novelGene_15213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGTTTTTAAAAGAATCA	NA	False	NA	NA	False	NA	NA	NA	9977063	9979710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_9977100_9979700
ES.18316.1	chr2	+	181	1	Intergenic	novelGene_15215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10036285	10036466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10036300_10036500
ES.18317.1	chr2	-	4824	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-32	0	-32	0	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	10053439	9919362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.10	chr2	-	3776	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-20	1036	-20	-297	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGTGTTTAATTCTGG	NA	False	NA	0	True	AATAAA	-30	NA	10053427	9920398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.11	chr2	-	3554	6	NIC	ENSMUSG00000025782.13	novel	4792	7	NA	NA	-48	-304	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	56.663921502134	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTATCGTGTTTA	NA	False	NA	-7	True	AATAAA	-23	NA	10053455	9920405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10053045
ES.18317.12	chr2	-	3286	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-11	1517	-11	7	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTCTTCTCTCCAG	NA	False	NA	NA	False	AATAAA	-24	NA	10053418	9920879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.13	chr2	-	4006	1	Intergenic	novelGene_15212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	9938788	9934782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_9934800_9938800
ES.18317.14	chr2	-	8242	4	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-11	20664	-11	-19138	5prime_fragment	FALSE	canonical	3	96	junction_1	23.3380947522857	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACCCAGAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	10053418	9940026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.15	chr2	-	177	1	Intergenic	novelGene_15214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	10008132	10007955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10008000_10008100
ES.18317.16	chr2	-	2336	1	Intergenic	novelGene_15216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACATTAGAAACCATAAA	3704	False	NA	NA	False	NA	NA	NA	10044896	10042560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10042600_10044900
ES.18317.2	chr2	-	2312	4	NNC	ENSMUSG00000025782.13	novel	4897	5	NA	NA	2304	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.7758315369059	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTTTGCTTTTCCATTT	8387	False	NA	-4	True	AATAAA	-16	NA	9944258	9919366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_9921278_9922913_9923021_9925862_9926113_9944214
ES.18317.4	chr2	-	2820	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	1931	146	1931	-146	multi-exon	FALSE	canonical	3	96	junction_4	22.410934831015	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTCTCTTTTCTTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	9956537	9919510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ES.18317.5	chr2	-	4440	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-21	373	-21	366	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTTTTTACTCCCA	NA	False	NA	NA	False	AATATA	-13	NA	10053428	9919735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.6	chr2	-	4082	8	NNC	ENSMUSG00000025782.13	novel	4792	7	NA	NA	-21	212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.5949226506978	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTTAACTTTATTAGC	NA	False	NA	NA	False	AAAACA	-1	NA	10053428	9919889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_9919904_9920103_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955928_9957757_10047237_10047481_10053045
ES.18317.7	chr2	-	4081	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	-27	738	-27	1	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTGTTTATATTGTT	NA	False	NA	NA	False	AGTAAA	-19	NA	10053434	9920100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ES.18317.8	chr2	-	6201	3	ISM	ENSMUSG00000025782.13	ENSMUST00000129720.2	2217	5	15782	0	-7135	0	3prime_fragment	FALSE	canonical	3	137	junction_2	10	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGTGTTTATATTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	9930780	9920101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_9921278_9922913_9923021_9925862
ES.18318.1	chr2	+	189	1	Intergenic	novelGene_15217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	10075255	10075444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10075300_10075400
ES.18319.1	chr2	-	3241	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_5	1504.9810422394	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9583	False	NA	-2	True	AATAAA	-19	NA	10085242	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10063904_10064311_10064468_10068096_10068162_10068253_10068363_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.10	chr2	-	1001	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	43	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1419.22545386168	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9630	False	NA	-6	True	AATAAA	-15	NA	10085195	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068363_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.11	chr2	-	1058	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	17	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1443.13855498663	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9604	False	NA	-6	True	AATAAA	-15	NA	10085221	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060964_10061575_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.13	chr2	-	1118	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	-76	18	7	-4	multi-exon	FALSE	canonical	3	78	junction_1	1503.84357564209	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9511	False	NA	-6	True	AATAAA	-15	NA	10085314	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.15	chr2	-	7311	5	NIC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	11666	-4	intron_retention	FALSE	canonical	3	4129	junction_1	269.855864305373	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	7489	False	NA	-6	True	AATAAA	-15	NA	10073004	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10064468_10068096_10068162_10068253_10068398_10068917
ES.18319.16	chr2	-	943	9	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	1	69	junction_5	1458.17855130982	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9579	False	NA	-6	True	AATAAA	-15	NA	10085246	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.17	chr2	-	1062	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1529.55171128668	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9583	False	NA	-6	True	AATAAA	-15	NA	10085242	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10063790_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.2	chr2	-	8704	6	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	4474	junction_5	105.384249297511	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9581	False	NA	-2	True	AATAAA	-19	NA	10085244	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10063904_10064311_10064468_10068096_10068162_10068253_10073553_10074503_10074539_10085158
ES.18319.20	chr2	-	8731	2	NIC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	11466	-4	intron_retention	FALSE	canonical	3	4785	junction_1	0	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	7289	False	NA	-6	True	AATAAA	-15	NA	10073204	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10064468_10068096
ES.18319.21	chr2	-	4764	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	47	junction_1	1487.79311712852	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9582	False	NA	-6	True	AATAAA	-15	NA	10085243	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061529_10061618_10063806_10063904_10064311_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.22	chr2	-	5936	6	NIC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	14073	-4	intron_retention	FALSE	canonical	3	3857	junction_2	353.203850488638	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9896	False	NA	-6	True	AATAAA	-15	NA	10070597	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10068162_10068253_10068398_10068917
ES.18319.23	chr2	-	3312	9	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-27	-4	intron_retention	FALSE	canonical	3	4129	junction_1	202.240535934318	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9543	False	NA	-6	True	AATAAA	-15	NA	10085282	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.24	chr2	-	1077	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1431.72885218286	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9582	False	NA	-6	True	AATAAA	-15	NA	10085243	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073546_10074503_10074539_10085158
ES.18319.26	chr2	-	1299	11	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1791.00376604852	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9574	False	NA	-6	True	AATAAA	-15	NA	10085251	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10067119_10067327_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.27	chr2	-	1134	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	47	junction_1	1428.61700368219	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9583	False	NA	-6	True	AATAAA	-15	NA	10085242	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061529_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.28	chr2	-	1023	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1428.74420383776	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTCATTATTAA	9596	False	NA	-6	True	AATAAA	-15	NA	10085229	10060844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063857_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.29	chr2	-	3368	8	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	8	-5	intron_retention	FALSE	canonical	3	4129	junction_1	211.006238422141	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGTCTCATTATTA	9578	False	NA	-7	True	AATAAA	-14	NA	10085247	10060845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10063904_10064311_10064468_10068096_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.3	chr2	-	5386	9	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	3857	junction_2	305.851577566636	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10073553_10074503_10074539_10085158
ES.18319.31	chr2	-	6901	8	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	4129	junction_1	194.113158666142	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAGTCTCATTATTA	9582	False	NA	-7	True	AATAAA	-14	NA	10085243	10060845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10063904_10064311_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.32	chr2	-	1156	10	NIC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	102	junction_9	1403.57836340627	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9836	False	NA	-8	True	AATAAA	-13	NA	10084989	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10084830
ES.18319.33	chr2	-	3327	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	7	-6	intron_retention	FALSE	canonical	1	47	junction_1	1514.06055340432	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9577	False	NA	-8	True	AATAAA	-13	NA	10085248	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061529_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.35	chr2	-	1065	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1429.05214204778	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9582	False	NA	-8	True	AATAAA	-13	NA	10085243	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063887_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.36	chr2	-	1081	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1437.38539210335	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9574	False	NA	-8	True	AATAAA	-13	NA	10085251	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073429_10073553_10074503_10074539_10085158
ES.18319.37	chr2	-	8547	7	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	7	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	1736.79712401881	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9577	False	NA	-8	True	AATAAA	-13	NA	10085248	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10064222_10064264_10064468_10068096_10068162_10068253_10068398_10068917_10073553_10074503_10074539_10085158
ES.18319.38	chr2	-	6717	10	NNC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1434.96070406901	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGTCTCATTATT	9582	False	NA	-8	True	AATAAA	-13	NA	10085243	10060846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10079523
ES.18319.39	chr2	-	1129	10	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1883.71841359806	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAATCAGTCTCATTAT	9579	False	NA	-9	True	AATAAA	-12	NA	10085246	10060847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061529_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073543_10074499_10074539_10085158
ES.18319.4	chr2	-	4672	9	NNC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	canonical	1	13	junction_6	1993.40126652287	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9604	False	NA	-2	True	AATAAA	-19	NA	10085221	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10069777_10073553_10074503_10074539_10085158
ES.18319.41	chr2	-	1671	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114896.8	1735	10	56	8	39	-8	multi-exon	FALSE	canonical	1	58	junction_9	1417.11214782253	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAATCAGTCTCATTA	9626	False	NA	-10	True	AATAAA	-11	NA	10085199	10060848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10084523
ES.18319.42	chr2	-	1491	10	NNC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1434.96070406901	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAAAATCAGTCTCAT	9587	False	NA	-12	True	AATAAA	-9	NA	10085238	10060850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10084740
ES.18319.5	chr2	-	3941	8	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	22	0	intron_retention	FALSE	canonical	3	4406	junction_5	133.764032260285	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9526	False	NA	-2	True	AATAAA	-19	NA	10085299	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.18319.6	chr2	-	7578	8	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	4129	junction_1	208.298157574616	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9579	False	NA	-2	True	AATAAA	-19	NA	10085246	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10060973_10061580_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10073553_10074503_10074539_10085158
ES.18319.7	chr2	-	8183	7	NIC	ENSMUSG00000025781.15	novel	1166	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	4474	junction_6	113.26174209424	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9582	False	NA	-2	True	AATAAA	-19	NA	10085243	10060840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10073553_10074503_10074539_10085158
ES.18319.8	chr2	-	1180	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	-16	2	-16	-2	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGTCTCATTATTAATA	9488	False	NA	-4	True	AATAAA	-17	NA	10085337	10060842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ES.1832.1	chr1	+	193	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	167709063	167709256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_167709100_167709300
ES.18320.1	chr2	+	5791	3	NIC	ENSMUSG00000037262.8	novel	1472	5	NA	NA	-22	-106	intron_retention	FALSE	canonical	3	44	junction_2	4.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTATTTTATCTTT	4772	False	NA	NA	False	AATAAA	-23	NA	10085381	10097511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10085556_10090540_10095175_10096528
ES.18320.2	chr2	+	1409	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-43	106	-12	-106	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTATTTTATCTTT	4782	False	NA	NA	False	AATAAA	-23	NA	10085391	10097511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
ES.18320.3	chr2	+	2723	4	ISM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	-10	113	-10	-113	intron_retention	FALSE	canonical	3	38	junction_2	6.23609564462324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCATAACTGTTATTT	4815	False	NA	NA	False	AATAAA	-16	NA	10085424	10097504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051
ES.18320.4	chr2	+	6914	2	NNC	ENSMUSG00000037262.8	novel	647	3	NA	NA	-4562	-106	intron_retention	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTATTTTATCTTT	9936	False	NA	NA	False	AATAAA	-23	NA	10090545	10097511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10093821_10093872
ES.18321.1	chr2	-	176	1	Intergenic	novelGene_15218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACTGA	9883	False	NA	NA	False	NA	NA	NA	10087241	10087065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10087100_10087200
ES.18322.1	chr2	+	274	1	Intergenic	novelGene_15219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAAAACACGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	10100194	10100468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10100200_10100500
ES.18323.1	chr2	+	280	1	Intergenic	novelGene_15220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10267923	10268203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10267900_10268200
ES.18323.2	chr2	+	129	1	Intergenic	novelGene_15221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGTAGAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	10267925	10268054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10267900_10268100
ES.18324.1	chr2	-	185	1	Intergenic	novelGene_15222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAAGGTCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	10294978	10294793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10294800_10295000
ES.18325.1	chr2	-	1078	1	Intergenic	novelGene_15223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCATTATTCAATAACT	NA	False	NA	NA	False	NA	NA	NA	10301659	10300581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10300600_10301700
ES.18326.1	chr2	+	177	1	Intergenic	novelGene_15224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGAGGAT	NA	False	NA	NA	False	NA	NA	NA	10310343	10310520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10310300_10310500
ES.18327.1	chr2	+	137	1	Intergenic	novelGene_15228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAAAATTTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	10364222	10364359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10364200_10364400
ES.18328.1	chr2	-	645	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8772	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.59608164593	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370080	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369968
ES.18328.10	chr2	-	842	6	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8796	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	250.855815160821	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTTGTGTTCATTCT	NA	False	NA	-15	True	AATAAA	-12	NA	10370056	10344095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10351925_10352011_10353545_10353684_10369968
ES.18328.11	chr2	-	599	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8810	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	210.184574970561	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGTTTGTGTTCATTC	NA	False	NA	-16	True	AATAAA	-11	NA	10370042	10344096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346540_10350070_10350197_10369964
ES.18328.12	chr2	-	4790	1	Intergenic	novelGene_15225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCAGTCCTTGGATAAT	4210	False	NA	NA	False	NA	NA	NA	10361027	10356237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10356200_10361000
ES.18328.13	chr2	-	4331	2	Intergenic	novelGene_15227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCAGTCCTTGGATAAT	NA	False	NA	NA	False	NA	NA	NA	10370048	10356237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10356566_10366045
ES.18328.14	chr2	-	1658	2	Intergenic	novelGene_15226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCAGTCCTTGGATAAT	NA	False	NA	NA	False	NA	NA	NA	10370042	10356237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10356566_10368712
ES.18328.15	chr2	-	4147	1	Intergenic	novelGene_15229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCCCAAGCACAACCAGG	NA	False	NA	NA	False	NA	NA	NA	10370042	10365895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10365900_10370000
ES.18328.2	chr2	-	603	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8808	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232.402428749979	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370044	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346534_10350061_10350197_10369968
ES.18328.3	chr2	-	799	5	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8798	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	227.25041254088	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370054	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10344861_10345042_10346331_10346540_10350061_10350197_10369968
ES.18328.4	chr2	-	5628	3	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	10506	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	246.5	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10368346	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10348980_10365556
ES.18328.5	chr2	-	5524	3	ISM	ENSMUSG00000086748.2	ENSMUST00000137351.2	1020	4	23665	0	23665	0	3prime_fragment	FALSE	canonical	3	493	junction_1	18.5	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10355187	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_10344284_10346331_10346540_10350061
ES.18328.6	chr2	-	638	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8807	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232.402428749979	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370045	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346540_10350033_10350197_10369968
ES.18328.7	chr2	-	693	5	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8810	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	256.084336693988	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370042	10344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10351924_10352011_10369968
ES.18328.9	chr2	-	2656	3	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8808	-1	intron_retention	FALSE	canonical	0	0	junction_2	265	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTGTGTTCATTCTG	NA	False	NA	-14	True	AATAAA	-13	NA	10370044	10344094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_10346540_10350061_10350197_10369968
ES.18329.1	chr2	+	6084	22	NNC	ENSMUSG00000061186.16	novel	1763	6	NA	NA	-267	-1614	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_18	16.6914102041492	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTATACTGGCATTGCA	2496	False	NA	NA	False	AATAAA	-18	NA	10375053	10598438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10375156_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.10	chr2	+	8077	24	NIC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	-147	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	14.3404460598235	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	4542	False	NA	1	True	AATAAA	-14	NA	10377099	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10377428_10384995_10385047_10385833_10385878_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.11	chr2	+	7972	22	NIC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	-139	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	13.2706007225527	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTGGTGTTTGTGTT	4550	False	NA	-1	True	AATAAA	-12	NA	10377107	10600060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10377428_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.12	chr2	+	8026	23	FSM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	-152	0	-138	0	multi-exon	FALSE	canonical	3	38	junction_1	8.61768314629387	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	4551	False	NA	3	True	AATAAA	-16	NA	10377108	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.13	chr2	+	7857	21	NIC	ENSMUSG00000061186.16	novel	7821	23	NA	NA	-123	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	17.0952478776998	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTGGTGTTTGTGTT	4566	False	NA	-1	True	AATAAA	-12	NA	10377123	10600060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10377428_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.14	chr2	+	7589	22	NNC	ENSMUSG00000061186.16	novel	7821	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	16.4556712304986	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTATGGTGGTG	4686	False	NA	-9	True	AATAAA	-4	NA	10377243	10600052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444868_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.16	chr2	+	7772	22	NIC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_18	13.6521409449563	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	4706	False	NA	3	True	AATAAA	-16	NA	10377263	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.17	chr2	+	7798	23	FSM	ENSMUSG00000061186.16	ENSMUST00000116594.9	7821	23	23	0	9	0	multi-exon	FALSE	canonical	2	2	junction_19	17.4500467687455	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTATGGTGGTG	4712	False	NA	-9	True	AATAAA	-4	NA	10377269	10600052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_10377428_10384995_10385047_10385833_10385878_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.18	chr2	+	7839	23	NNC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.3347967817603	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTGGTGTTTGTGTT	4714	False	NA	-1	True	AATAAA	-12	NA	10377271	10600060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10453319_10453411_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583957_10584204_10585354_10585484_10595240
ES.18329.2	chr2	+	7869	25	NNC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-247	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7248982724028	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	2516	False	NA	1	True	AATAAA	-14	NA	10375073	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10375156_10375332_10375364_10376219_10376271_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.20	chr2	+	8214	17	ISM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	66280	12	66280	0	3prime_fragment	FALSE	canonical	3	38	junction_1	7.47391296443837	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTATGGTGGTG	3663	False	NA	-9	True	AATAAA	-4	NA	10443540	10600052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.21	chr2	+	7761	16	NNC	ENSMUSG00000061186.16	novel	7821	23	NA	NA	83085	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.257941257029	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	NA	False	NA	3	True	AATAAA	-16	NA	10460345	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10461363_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.22	chr2	+	6744	15	ISM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	84453	2	84453	-2	3prime_fragment	FALSE	canonical	3	40	junction_7	7.15142343473362	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	10461713	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.23	chr2	+	7392	14	NNC	ENSMUSG00000061186.16	novel	7821	23	NA	NA	148653	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.2373723060408	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	2597	False	NA	3	True	AATAAA	-16	NA	10525913	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10526812_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.3	chr2	+	7839	23	NIC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	13.1658210140958	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	2674	False	NA	3	True	AATAAA	-16	NA	10375231	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.4	chr2	+	7861	24	NIC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-62	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	13.9709393226675	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	2701	False	NA	1	True	AATAAA	-14	NA	10375258	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10376219_10376271_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.5	chr2	+	7892	25	NIC	ENSMUSG00000061186.16	novel	659	7	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	17.2947788364003	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	2714	False	NA	1	True	AATAAA	-14	NA	10375271	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10376219_10376271_10384995_10385047_10385833_10385878_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.6	chr2	+	7930	25	NNC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	18.9230899520489	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	2721	False	NA	3	True	AATAAA	-16	NA	10375278	10600064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_10375364_10376219_10376271_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10575895_10575983_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.7	chr2	+	7741	23	NIC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-41	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	17.1847640572246	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	2722	False	NA	1	True	AATAAA	-14	NA	10375279	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10376219_10376271_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.8	chr2	+	7669	22	NIC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	16.8187617944758	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTGTTTGTGTTTC	2743	False	NA	1	True	AATAAA	-14	NA	10375300	10600062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.18329.9	chr2	+	6176	24	NIC	ENSMUSG00000061186.16	novel	1813	7	NA	NA	0	-1613	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	13.9709393226675	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTATACTGGCATTGCAT	2763	False	NA	NA	False	AATAAA	-19	NA	10375320	10598439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_10375364_10376219_10376271_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ES.1833.1	chr1	-	2985	1	ISM	ENSMUSG00000052534.16	ENSMUST00000176540.8	6876	9	275362	9	8127	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATACACAC	NA	False	NA	NA	False	AATAAA	-17	NA	167984104	167981119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_167981100_167984100
ES.1833.2	chr1	-	2135	1	ISM	ENSMUSG00000052534.16	ENSMUST00000176540.8	6876	9	274857	1364	7622	-1364	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAAAAAAGAGAA	NA	False	NA	NA	False	AATGAA	-24	NA	167984609	167982474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_167982500_167984600
ES.1833.3	chr1	-	1886	1	ISM	ENSMUSG00000052534.16	ENSMUST00000176540.8	6876	9	274967	1503	7732	-1503	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	TTTAAA	-27	NA	167984499	167982613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_167982600_167984500
ES.1833.4	chr1	-	2627	1	ISM	ENSMUSG00000052534.16	ENSMUST00000176540.8	6876	9	273801	1928	6566	-1928	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATTCTTTCAGCTTT	NA	False	NA	NA	False	AAAAAG	-44	NA	167985665	167983038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_167983000_167985700
ES.18330.1	chr2	-	3929	1	Intergenic	novelGene_15230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAATCATTTTTAAC	NA	False	NA	NA	False	AATAAA	-11	NA	10396326	10392397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10392400_10396300
ES.18331.1	chr2	-	6942	1	Intergenic	novelGene_15231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAGTACGGGAGCCGG	NA	False	NA	NA	False	NA	NA	NA	10460834	10453892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_10453900_10460800
ES.18332.1	chr2	+	3477	1	Intergenic	novelGene_15232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCACACAAAAAGTGCTGA	5682	False	NA	NA	False	NA	NA	NA	10600547	10604024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10600500_10604000
ES.18333.1	chr2	+	247	1	Intergenic	novelGene_15233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	10751805	10752052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10751800_10752100
ES.18334.1	chr2	+	187	1	Intergenic	novelGene_15234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	10818774	10818961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_10818800_10819000
ES.18335.1	chr2	+	3610	17	NIC	ENSMUSG00000026778.14	novel	3583	18	NA	NA	-91	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	0.484122918275927	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTCTTAGTGGTTTG	959	False	NA	NA	False	AATAAA	-12	NA	11176827	11306030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11177272_11231669_11231797_11237340_11237541_11250063_11250227_11251609_11251642_11251738_11251825_11253011_11253142_11257879_11257990_11258981_11259100_11260967_11261129_11265463_11265638_11281825_11281918_11284276_11284340_11288556_11288696_11295199_11295389_11304105_11304235_11304777
ES.18335.2	chr2	+	126	1	Intergenic	novelGene_15235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAATAGCCAG	NA	False	NA	NA	False	NA	NA	NA	11298530	11298656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_11298500_11298700
ES.18336.1	chr2	-	1185	6	Antisense	novelGene_ENSMUSG00000026778.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTGCCTCATGTGAT	NA	False	NA	NA	False	NA	NA	NA	11295069	11242611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_11242816_11243684_11244010_11260932_11261093_11266673_11266834_11286413_11286629_11294948
ES.18337.1	chr2	+	171	1	Intergenic	novelGene_15236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGCTAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	11311727	11311898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_11311700_11311900
ES.18338.1	chr2	-	164	1	Intergenic	novelGene_15237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGGTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	11375636	11375472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_11375500_11375600
ES.18339.1	chr2	-	383	1	FSM	ENSMUSG00000082424.5	ENSMUST00000120014.3	1000	1	827	-210	827	210	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGCCAGTTTGATGTG	NA	False	NA	NA	False	AATAAA	-43	NA	11414014	11413631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11413600_11414000
ES.1834.1	chr1	-	180	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168224116	168223936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_168223900_168224100
ES.18340.1	chr2	+	6334	9	Antisense	novelGene_ENSMUSG00000026773.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTATTTTCTCTATTG	NA	False	NA	NA	False	NA	NA	NA	11489561	11504619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_11489676_11491031_11491154_11493535_11493593_11494480_11494553_11495094_11495166_11497364_11497468_11498713_11500871_11500933_11502505_11502552
ES.18341.1	chr2	+	178	1	Intergenic	novelGene_15238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGGGAAGAAAAAAAGA	3281	False	NA	NA	False	NA	NA	NA	11525366	11525544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_11525400_11525500
ES.18342.1	chr2	+	6105	1	Intergenic	novelGene_15239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTTCCTTTTGTTTT	6447	False	NA	NA	False	NA	NA	NA	11542162	11548267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_11542200_11548300
ES.18343.1	chr2	-	1747	1	ISM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	80898	0	8932	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAATAGACTATTGTTT	6791	False	NA	NA	False	AATAAA	-14	NA	11477990	11476243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_11476200_11478000
ES.18343.10	chr2	-	4729	16	FSM	ENSMUSG00000026773.20	ENSMUST00000179584.8	4756	16	-8	35	-8	0	multi-exon	FALSE	canonical	2	5	junction_2	12.3475593629762	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	6300	False	NA	-5	True	AATAAA	-17	NA	11506920	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11479355_11485008_11485183_11486057_11486145_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ES.18343.11	chr2	-	4541	16	NIC	ENSMUSG00000026773.20	novel	4756	16	NA	NA	-46	0	intron_retention	FALSE	canonical	2	5	junction_2	12.4988888395018	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	NA	False	NA	-5	True	AATAAA	-17	NA	11558934	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11479355_11485008_11485183_11486057_11486145_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.12	chr2	-	4755	15	NNC	ENSMUSG00000026773.20	novel	4634	15	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_1	12.2690917449051	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	6276	False	NA	-5	True	AATAAA	-17	NA	11506944	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11479355_11484919_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ES.18343.13	chr2	-	2654	11	NNC	ENSMUSG00000026773.20	novel	4001	12	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.7200478468215	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	NA	False	NA	-5	True	AATAAA	-17	NA	11558832	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477682_11477736_11478314_11489080_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.14	chr2	-	3351	1	NIC	ENSMUSG00000026773.20	novel	4801	15	NA	NA	6935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	4794	False	NA	-5	True	AATAAA	-17	NA	11479987	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11476600_11480000
ES.18343.15	chr2	-	4144	14	NIC	ENSMUSG00000026773.20	novel	4801	15	NA	NA	-67	0	intron_retention	FALSE	canonical	0	0	junction_1	12.6149155635128	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCGGGACTCGCTTC	NA	False	NA	-7	True	AATAAA	-15	NA	11558800	11476638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11479355_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.16	chr2	-	3905	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	324	405	20	-403	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTTGCATATTTGTTT	6632	False	NA	NA	False	AATAAA	-17	NA	11506588	11477041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ES.18343.2	chr2	-	4677	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	-9	-34	-9	-1	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTGTCAGTTTTCTTT	6299	False	NA	29	True	NA	NA	NA	11506921	11476602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ES.18343.3	chr2	-	4434	16	NNC	ENSMUSG00000026773.20	novel	4801	15	NA	NA	-48	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.0436244083286	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGTGTCAGTTTTCTT	NA	False	NA	28	True	NA	NA	NA	11558936	11476603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477682_11477736_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.4	chr2	-	4524	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	-85	362	-85	-4	multi-exon	FALSE	canonical	3	18	junction_2	9.7969174660571	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAAGTGTCAGTTTTC	NA	False	NA	26	True	NA	NA	NA	11558973	11476605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.5	chr2	-	4519	16	NNC	ENSMUSG00000026773.20	novel	4801	15	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.9114660941573	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGGACTCGCTTCTCAG	NA	False	NA	-3	True	AATAAA	-19	NA	11558963	11476634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477682_11477736_11479355_11484919_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.6	chr2	-	4630	16	NNC	ENSMUSG00000026773.20	novel	4756	16	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.8595484268537	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	6258	False	NA	-4	True	AATAAA	-18	NA	11506962	11476635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477682_11477736_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ES.18343.7	chr2	-	4433	17	NNC	ENSMUSG00000026773.20	novel	2163	17	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.7925478066962	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGACTCGCTTCTCA	NA	False	NA	-4	True	AATAAA	-18	NA	11558880	11476635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477682_11477736_11479355_11485008_11485183_11486057_11486145_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18343.8	chr2	-	4470	17	NNC	ENSMUSG00000026773.20	novel	2163	17	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1098839753984	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	NA	False	NA	-5	True	AATAAA	-17	NA	11558928	11476636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11477690_11477751_11479355_11485011_11485183_11486057_11486145_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ES.18344.1	chr2	-	168	1	Intergenic	novelGene_15240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTGGAGCAAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	11562145	11561977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_11562000_11562100
ES.18345.1	chr2	-	171	1	Intergenic	novelGene_15241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTAGCCAAGCCAA	8305	False	NA	NA	False	NA	NA	NA	11588425	11588254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_11588300_11588400
ES.18346.1	chr2	-	2551	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	28	-980	28	980	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTGTGGATTTTTGC	NA	False	NA	NA	False	TATAAA	-44	NA	11608045	11589267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.10	chr2	-	4250	10	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	58	0	intron_retention	FALSE	canonical	1	1	junction_2	433.515887472833	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608015	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11591541_11591677_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.11	chr2	-	7730	8	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	FALSE	canonical	3	1263	junction_5	72.3384900509897	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608040	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11593903_11595499_11598276_11600141_11602980_11605429_11605568_11607895
ES.18346.12	chr2	-	6276	8	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	35	0	intron_retention	FALSE	canonical	3	1239	junction_3	95.5241181213265	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608038	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11593903_11595499_11595642_11598218_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.13	chr2	-	6847	9	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	57	0	intron_retention	FALSE	canonical	3	1260	junction_5	69.1428548369244	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608016	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.14	chr2	-	3278	9	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	39	-1	intron_retention	FALSE	canonical	1	9	junction_6	449.969009349533	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCTCTGGTTGTT	NA	False	NA	-27	True	TATAAA	-15	NA	11608034	11590250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11602862_11602980_11605429_11605568_11607895
ES.18346.15	chr2	-	4139	11	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	FALSE	canonical	3	1260	junction_7	88.5076267900117	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11608040	11590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.16	chr2	-	3450	10	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	FALSE	canonical	3	1239	junction_4	89.9296020970477	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11608040	11590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.17	chr2	-	4857	8	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	2551	0	intron_retention	FALSE	canonical	3	1239	junction_3	82.4096289202634	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11605522	11590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429
ES.18346.18	chr2	-	2668	11	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	58	0	intron_retention	FALSE	canonical	0	0	junction_5	416.37406259276	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11608015	11590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11593903_11595499_11595642_11598220_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.19	chr2	-	5445	5	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	5137	0	intron_retention	FALSE	canonical	3	1239	junction_2	106.490316461169	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	2100	False	NA	-28	True	TATAAA	-14	NA	11602936	11590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439
ES.18346.2	chr2	-	1525	8	ISM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	7864	-556	-4540	556	3prime_fragment	FALSE	canonical	3	1239	junction_6	98.9761876124036	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTGTGTGAGTTTC	4827	False	NA	NA	False	AATAAA	-26	NA	11600209	11589691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141
ES.18346.20	chr2	-	1534	12	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	44	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	404.196233333912	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608029	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592543_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.21	chr2	-	4350	9	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	75	-5	intron_retention	FALSE	canonical	3	1239	junction_3	70.0293465270097	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11607998	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590718_11591677_11591777_11592531_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.22	chr2	-	5088	10	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	39	-5	intron_retention	FALSE	canonical	3	1260	junction_6	93.1462410525633	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608034	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11591777_11592531_11592606_11593738_11593903_11595499_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.23	chr2	-	5639	2	FSM	ENSMUSG00000037197.12	ENSMUST00000195047.2	347	2	-1823	-3469	-1823	-5	multi-exon	FALSE	canonical	3	1499	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	7544	False	NA	31	True	TATAAA	-9	NA	11597492	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11593903_11595499
ES.18346.24	chr2	-	2971	11	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	15	-5	intron_retention	FALSE	canonical	2	22	junction_3	408.019117199182	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608058	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592268_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.25	chr2	-	1794	12	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	59	-5	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_3	398.045285849207	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608014	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592268_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.26	chr2	-	1430	12	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	404.37792240951	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608040	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602895_11605471_11605568_11607895
ES.18346.27	chr2	-	1417	11	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	6	-5	combination_of_known_splicesites	FALSE	canonical	1	9	junction_8	416.264531277888	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608067	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11602862_11602980_11605429_11605568_11607895
ES.18346.28	chr2	-	1459	11	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	57	-5	combination_of_known_splicesites	FALSE	canonical	2	42	junction_3	402.153701959835	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608016	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.3	chr2	-	1623	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	-11	-13	-11	13	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTCTCCACTGCTTCT	NA	False	NA	-11	True	TATAAA	-31	NA	11608084	11590234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.31	chr2	-	1342	12	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	57	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	404.37792240951	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11608016	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602902_11605542_11605568_11607895
ES.18346.32	chr2	-	3905	10	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	74	-5	intron_retention	FALSE	canonical	3	1239	junction_5	79.752549400019	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11607999	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11602980_11605429_11605568_11607895
ES.18346.35	chr2	-	5954	7	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	85	-5	intron_retention	FALSE	canonical	3	1239	junction_3	84.7278322368486	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	False	NA	31	True	TATAAA	-9	NA	11607988	11590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590718_11591677_11593903_11595499_11595642_11598218_11598276_11600141_11602980_11605429_11605568_11607895
ES.18346.37	chr2	-	1634	13	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	21	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	516.887775268696	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTGTGTTTTTTT	NA	False	NA	-11	True	AATATA	-16	NA	11608052	11590298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591433_11591541_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.38	chr2	-	1317	11	ISM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	17	370	17	-366	5prime_fragment	FALSE	canonical	3	1239	junction_5	95.9674944968347	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAAAGTTACTATTT	NA	False	NA	-35	True	ATTAAA	-29	NA	11608056	11590617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.4	chr2	-	6009	8	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	FALSE	canonical	3	1239	junction_2	82.3072888383427	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608040	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.5	chr2	-	10399	6	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	TRUE	canonical	0	0	junction_1	542.131128049294	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608040	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11598466_11598623_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.6	chr2	-	4388	9	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	57	0	intron_retention	FALSE	canonical	3	1239	junction_3	95.2785390316203	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608016	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.7	chr2	-	4457	8	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	93	0	intron_retention	FALSE	canonical	3	1239	junction_2	97.053530358777	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11607980	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.8	chr2	-	4557	10	NNC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	33	0	intron_retention	FALSE	canonical	2	22	junction_3	418.686423218683	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608040	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592268_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18346.9	chr2	-	6005	9	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	57	0	intron_retention	FALSE	canonical	3	1260	junction_5	85.4553063010133	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTCTGGTTGTTT	NA	False	NA	-26	True	TATAAA	-16	NA	11608016	11590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11590540_11590644_11590718_11591677_11593903_11595499_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ES.18347.1	chr2	-	177	1	Intergenic	novelGene_15242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGTGAGGCC	9568	False	NA	NA	False	NA	NA	NA	11610942	11610765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_11610800_11610900
ES.18348.1	chr2	-	176	1	Intergenic	novelGene_15243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGGAAAGA	8479	False	NA	NA	False	NA	NA	NA	11643019	11642843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_11642800_11643000
ES.18349.1	chr2	-	3858	1	Antisense	novelGene_ENSMUSG00000023206.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCTCTATTATCACAT	NA	False	NA	NA	False	AGTAAA	-13	NA	11742039	11738181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_11738200_11742000
ES.1835.1	chr1	-	162	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGGAACTCGGAAA	NA	False	NA	NA	False	NA	NA	NA	168272176	168272014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_168272000_168272200
ES.18350.1	chr2	+	4422	6	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-142	0	intron_retention	FALSE	canonical	3	29	junction_2	16.4	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4011	False	NA	33	True	AATAAA	-35	NA	11782544	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.10	chr2	+	5393	6	NIC	ENSMUSG00000047909.12	novel	3688	6	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_3	31.5569326773056	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATTCAAGCTCTAAAA	4771	False	NA	13	True	AATAAA	-15	NA	11783304	11795116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11788568_11789101_11789264_11789980_11790072_11791034_11791114_11794544
ES.18350.11	chr2	+	4184	5	NIC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	29	junction_2	17.8097585609688	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTATTCAATTTTTT	4794	False	NA	37	True	AATAAA	-39	NA	11783327	11795140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11789264_11791034_11791114_11794544
ES.18350.12	chr2	+	2780	7	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	22.4251842554055	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4801	False	NA	33	True	AATAAA	-35	NA	11783334	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11792383_11794544
ES.18350.13	chr2	+	4939	6	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	24.8402898533813	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4801	False	NA	33	True	AATAAA	-35	NA	11783334	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784709_11786287_11788525_11789101_11789264_11791034_11792383_11794544
ES.18350.14	chr2	+	1540	7	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.1837690233655	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4806	False	NA	29	True	AATAAA	-31	NA	11783339	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788525_11789101_11789264_11791034_11791114_11794544
ES.18350.15	chr2	+	3703	6	FSM	ENSMUSG00000047909.12	ENSMUST00000125024.8	3688	6	7	-22	7	0	multi-exon	FALSE	canonical	3	10	junction_3	23.3871759731696	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4811	False	NA	33	True	AATAAA	-35	NA	11783344	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_11783714_11784487_11784709_11786287_11788568_11789101_11789264_11791034_11791114_11794544
ES.18350.16	chr2	+	4267	6	NNC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_4	30.4144702403313	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACATAGTTGGCCTAT	4813	False	NA	27	True	AATAAA	-29	NA	11783346	11795130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784635_11786287_11789264_11789933_11790046_11791034_11791114_11794544
ES.18350.17	chr2	+	3553	6	NNC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_3	26.5977442652568	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTATTCAAGCTCTAA	4822	False	NA	11	True	AATAAA	-13	NA	11783355	11795114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784635_11786287_11788525_11789101_11789264_11791034_11791114_11794544
ES.18350.18	chr2	+	3770	6	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-14	1	intron_retention	FALSE	canonical	2	2	junction_3	25.8565272223476	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4827	False	NA	29	True	AATAAA	-31	NA	11783360	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784709_11786287_11788561_11789007_11789264_11791034_11791114_11794544
ES.18350.19	chr2	+	5388	6	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-14	-4	intron_retention	FALSE	canonical	2	5	junction_3	30.1927143529693	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTAAAACATAGTTGGCC	4827	False	NA	24	True	AATAAA	-26	NA	11783360	11795127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11788561_11789101_11789264_11789933_11790072_11791034_11791114_11794544
ES.18350.2	chr2	+	4550	7	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-132	0	intron_retention	FALSE	canonical	2	5	junction_4	28.0515398666257	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4021	False	NA	33	True	AATAAA	-35	NA	11782554	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11789933_11790072_11791034_11791114_11794544
ES.18350.20	chr2	+	4231	6	NIC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_3	29.8489530804683	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATAGTTGGCCTATT	4829	False	NA	28	True	AATAAA	-30	NA	11783362	11795131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11789264_11789980_11790072_11791034_11791114_11794544
ES.18350.21	chr2	+	1618	8	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	26.0423516916705	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4835	False	NA	29	True	AATAAA	-31	NA	11783368	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11786331_11788451_11788568_11789101_11789264_11789933_11790072_11791034_11791114_11794544
ES.18350.22	chr2	+	5230	5	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	45	junction_3	11.0312057364551	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTAAAACATAGTTGGCC	4847	False	NA	24	True	AATAAA	-26	NA	11783380	11795127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.23	chr2	+	2662	7	NNC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	25.1423723798867	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4850	False	NA	33	True	AATAAA	-35	NA	11783383	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784635_11786287_11787531_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.24	chr2	+	4257	6	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	19	-11	intron_retention	FALSE	canonical	1	1	junction_2	26.2267039484568	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAATATAAACTGA	4868	False	NA	-7	True	TATAAA	-6	NA	11783401	11795096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11787531_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.25	chr2	+	5050	5	NIC	ENSMUSG00000047909.12	novel	753	8	NA	NA	-207	0	intron_retention	FALSE	canonical	2	5	junction_2	29.6426635105552	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	5955	False	NA	33	True	AATAAA	-35	NA	11784488	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11788568_11789101_11789264_11789933_11790072_11791034_11791114_11794544
ES.18350.26	chr2	+	3236	5	NNC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	-97	0	intron_retention	FALSE	canonical	2	2	junction_2	26.7861904719577	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	6065	False	NA	33	True	AATAAA	-35	NA	11784598	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11784635_11786287_11788561_11789007_11789264_11791034_11791114_11794544
ES.18350.27	chr2	+	4085	2	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-240	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	NA	False	NA	33	True	AATAAA	-35	NA	11788775	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11789587_11791862
ES.18350.28	chr2	+	3585	1	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	561	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTATTCAAGCTCTAA	NA	False	NA	11	True	AATAAA	-13	NA	11791529	11795114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11791500_11795100
ES.18350.3	chr2	+	4463	6	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-109	0	intron_retention	FALSE	canonical	3	30	junction_2	16.0822883943797	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4044	False	NA	33	True	AATAAA	-35	NA	11782577	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784709_11786287_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.4	chr2	+	2321	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	-707	4	-92	1	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4061	False	NA	29	True	AATAAA	-31	NA	11782594	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.5	chr2	+	4348	6	FSM	ENSMUSG00000047909.12	ENSMUST00000150213.8	3643	6	-730	25	-82	1	multi-exon	FALSE	canonical	3	10	junction_3	23.5168025037419	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTATTCAAGCTCTAAA	4071	False	NA	12	True	AATAAA	-14	NA	11782604	11795115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_11783714_11784487_11784635_11786287_11788568_11789101_11789264_11791034_11791114_11794544
ES.18350.6	chr2	+	3789	7	NNC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	56	0	intron_retention	FALSE	canonical	1	3	junction_1	24.5475728603325	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4209	False	NA	33	True	AATAAA	-35	NA	11782742	11795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11782961_11783395_11783714_11784487_11784635_11786287_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.7	chr2	+	2094	7	NIC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	61	1	intron_retention	FALSE	canonical	3	24	junction_3	18.9560896108172	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4214	False	NA	29	True	AATAAA	-31	NA	11782747	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ES.18350.8	chr2	+	2030	9	NNC	ENSMUSG00000047909.12	novel	1618	7	NA	NA	-282	-2	intron_retention	FALSE	canonical	0	0	junction_7	24.5865817062885	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAACATAGTTGGCCTA	4486	False	NA	26	True	AATAAA	-28	NA	11783019	11795129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_11783714_11784487_11784635_11786287_11786331_11788451_11788561_11789101_11789264_11789933_11790072_11791034_11791114_11792309_11792383_11794544
ES.18350.9	chr2	+	3812	7	NIC	ENSMUSG00000047909.12	novel	3643	6	NA	NA	-6	1	intron_retention	FALSE	canonical	2	5	junction_4	27.9727049500441	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGTTGGCCTATTC	4762	False	NA	29	True	AATAAA	-31	NA	11783295	11795132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_11783714_11784487_11784635_11786287_11788568_11789101_11789264_11789933_11790072_11791034_11791114_11794544
ES.18351.1	chr2	-	3574	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	-2	-5	-2	3	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTGTCATTTTTAAG	NA	False	NA	3	True	ATTAAA	-40	NA	11782395	11747380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.10	chr2	-	6233	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	17	0	intron_retention	FALSE	canonical	3	88	junction_17	50.3771244840382	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782342	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.11	chr2	-	3485	20	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_9	67.1470458156787	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782396	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.12	chr2	-	7115	2	ISM	ENSMUSG00000058594.16	ENSMUST00000136633.2	374	3	235	-6882	235	0	3prime_fragment	FALSE	canonical	3	262	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11756342	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_11754418_11756261
ES.18351.13	chr2	-	4423	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	67.8470252595137	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782361	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753500_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.14	chr2	-	3595	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	40	junction_19	66.9909695406776	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782365	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782214
ES.18351.15	chr2	-	3599	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782395	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.16	chr2	-	4153	20	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	-1	intron_retention	FALSE	canonical	3	88	junction_19	46.2749820228905	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782358	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.17	chr2	-	3607	22	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_4	89.0350385816623	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782324	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753500_11753581_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.18	chr2	-	5106	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	40	junction_16	71.6805678425358	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782395	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782214
ES.18351.19	chr2	-	3471	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	4	-1	intron_retention	FALSE	canonical	1	1	junction_5	65.2414553792295	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782314	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753928_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.2	chr2	-	3491	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_19	65.7071343158412	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTACTGTCATTTTTA	NA	False	NA	1	True	ATTAAA	-38	NA	11782320	11747382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772517_11774586_11774743_11782242
ES.18351.20	chr2	-	2888	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-8760	-1	intron_retention	FALSE	non_canonical	0	0	junction_18	85.5483210557464	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	5531	False	NA	-1	True	ATTAAA	-36	NA	11772044	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11769949_11770055_11771932
ES.18351.22	chr2	-	3507	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	66.0576263575978	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782334	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767827_11768676_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.23	chr2	-	5124	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	47	-1	intron_retention	FALSE	canonical	3	183	junction_17	31.1420453666643	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782271	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.24	chr2	-	4906	19	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	88	junction_18	47.5419567784182	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782361	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.25	chr2	-	4147	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	17	-1	intron_retention	FALSE	canonical	2	18	junction_14	72.8308859628832	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782342	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765348_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.26	chr2	-	4433	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_3	90.6925646028285	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782318	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751574_11751644_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.28	chr2	-	7496	19	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	3	junction_14	76.3866060264947	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782327	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.29	chr2	-	5015	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	-1	intron_retention	FALSE	canonical	3	183	junction_17	33.1103847433803	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782358	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.3	chr2	-	4228	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-6	0	intron_retention	FALSE	canonical	1	5	junction_5	66.1379821810479	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782324	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753924_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.31	chr2	-	3485	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	65.5320341512454	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782327	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756367_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.32	chr2	-	5085	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	1	junction_11	79.1848610185866	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782333	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.33	chr2	-	2266	16	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2038	-1	intron_retention	FALSE	canonical	0	0	junction_8	95.083028045084	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11765322	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11757082_11757198_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291
ES.18351.34	chr2	-	4633	8	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-34	-1	intron_retention	FALSE	canonical	0	0	junction_6	103.849773760967	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11762401	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11757195_11760451_11761315_11761412
ES.18351.35	chr2	-	3518	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-36	-1	intron_retention	FALSE	canonical	1	3	junction_16	65.4808941600525	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782429	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.36	chr2	-	4009	20	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	6	-1	intron_retention	FALSE	canonical	3	183	junction_19	32.3855752575826	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	NA	False	NA	-1	True	ATTAAA	-36	NA	11782387	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.37	chr2	-	3885	16	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-8921	-1	intron_retention	FALSE	canonical	3	230	junction_11	27.2564773137608	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGTACTGTCATTTT	5370	False	NA	-1	True	ATTAAA	-36	NA	11772205	11747384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932
ES.18351.38	chr2	-	3666	22	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_3	87.5010074447996	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782395	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751574_11751644_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.39	chr2	-	3523	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_12	73.987228627649	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782327	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763096_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.4	chr2	-	8175	16	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	88	junction_15	53.1559550338018	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782384	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.41	chr2	-	5483	16	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_15	96.0244413330967	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782313	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11763260_11764739_11764835_11765291_11765385_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11782214
ES.18351.44	chr2	-	3370	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_13	85.7153053626201	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782328	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11765291_11765348_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.45	chr2	-	3362	22	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	64.5590309772817	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782317	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747620_11747748_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.47	chr2	-	3402	20	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_19	65.437288919724	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782384	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11782242
ES.18351.48	chr2	-	4536	19	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	1	3	junction_14	68.992149311836	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782362	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.49	chr2	-	5886	15	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_10	83.6631060033181	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782336	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.5	chr2	-	7347	15	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-9027	0	intron_retention	FALSE	non_canonical	0	0	junction_13	98.1883861954838	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	5264	False	NA	0	True	ATTAAA	-37	NA	11772311	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11762474_11763090_11763260_11764739_11764835_11765291_11767833_11768680_11768817_11768913_11769045_11769949_11770055_11771932
ES.18351.50	chr2	-	4437	19	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-27	0	intron_retention	FALSE	canonical	3	183	junction_18	32.5096376973026	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782420	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.51	chr2	-	3541	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-834	0	intron_retention	FALSE	canonical	0	0	junction_20	79.2042296850364	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11783227	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11783128
ES.18351.52	chr2	-	4437	18	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_6	77.4517150622887	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782333	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.53	chr2	-	3863	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-8	0	intron_retention	FALSE	canonical	2	4	junction_20	63.3489344819627	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782326	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11781879
ES.18351.54	chr2	-	5620	15	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_10	83.7081909044139	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782326	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.55	chr2	-	3473	22	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_18	110.374891982033	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782333	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753875_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765348_11767641_11767833_11768680_11768817_11768913_11769045_11769949_11770055_11771932_11772523_11774560_11774743_11782242
ES.18351.56	chr2	-	4032	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_17	84.9191380078719	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782306	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11769949_11770055_11771932_11772523_11774586_11774743_11782242
ES.18351.57	chr2	-	4989	18	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_13	95.1756707593819	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782317	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765348_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.58	chr2	-	3642	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_16	66.0576263575978	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782384	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767917_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.6	chr2	-	4498	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_6	91.6954793969051	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782336	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11757082_11757198_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.61	chr2	-	4277	20	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-1	0	intron_retention	FALSE	canonical	2	18	junction_14	72.8137304028578	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782362	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765348_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.62	chr2	-	3458	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	7	0	intron_retention	FALSE	canonical	3	15	junction_4	78.058055317821	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782386	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753875_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
ES.18351.63	chr2	-	3551	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	78.2621236614494	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782358	11747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748443_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
ES.18351.64	chr2	-	5666	17	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	9	-1	intron_retention	FALSE	canonical	1	3	junction_12	91.8700678948263	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTCAGTACTGTCATT	NA	False	NA	-3	True	ATTAAA	-34	NA	11782384	11747386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765348_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.65	chr2	-	3568	22	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	2	junction_3	82.0688279251434	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTCAGTACTGTCATT	NA	False	NA	-3	True	ATTAAA	-34	NA	11782326	11747386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751574_11751644_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.66	chr2	-	3696	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_11	73.9772938137102	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTCAGTACTGTCATT	NA	False	NA	-3	True	ATTAAA	-34	NA	11782336	11747386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762091_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.67	chr2	-	5472	17	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	1	junction_10	80.6628544855065	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCTTCAGTACTGTCAT	NA	False	NA	-4	True	ATTAAA	-33	NA	11782327	11747387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.69	chr2	-	5145	18	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_8	97.7690945429631	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGCTTCAGTACTGTCA	NA	False	NA	-5	True	ATTAAA	-32	NA	11782391	11747388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11754418_11756261_11756384_11756477_11756578_11760451_11761315_11761412_11761501_11762091_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767747_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.7	chr2	-	3372	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_4	63.2971365861047	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782324	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753875_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.71	chr2	-	2761	13	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-2045	-5	intron_retention	FALSE	canonical	3	15	junction_4	76.7522620006878	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTAGCTTCAGTACTGT	NA	False	NA	-7	True	ATTAAA	-30	NA	11765329	11747390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753875_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291
ES.18351.72	chr2	-	3559	21	NNC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-7	-5	intron_retention	FALSE	canonical	0	0	junction_1	64.3212834138126	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTAGCTTCAGTACTGT	NA	False	NA	-7	True	ATTAAA	-30	NA	11782368	11747390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_11747845_11748414_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.74	chr2	-	6207	17	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	44	-59	intron_retention	FALSE	canonical	3	88	junction_16	51.2243457132446	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATTACAAGGTTTCAA	NA	False	NA	-61	True	GATAAA	-23	NA	11782274	11747444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
ES.18351.8	chr2	-	3374	19	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_13	69.0209308028288	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782386	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ES.18351.9	chr2	-	3598	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	-3	0	intron_retention	FALSE	canonical	3	40	junction_19	58.1895824009762	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782396	11747383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
ES.18352.1	chr2	+	175	1	Intergenic	novelGene_15244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTAT	NA	False	NA	NA	False	NA	NA	NA	12085166	12085341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_12085200_12085300
ES.18353.1	chr2	+	181	1	Intergenic	novelGene_15245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGAGATGGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	12272770	12272951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_12272800_12273000
ES.18354.1	chr2	-	5830	30	FSM	ENSMUSG00000026768.11	ENSMUST00000028106.11	5812	30	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_1	1.31577820885096	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTTAGCTCATTTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	12306751	12111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_12114013_12115785_12115909_12124757_12124860_12137249_12137364_12145188_12145318_12160182_12160342_12165132_12165239_12178963_12179045_12183454_12183535_12187469_12187563_12194283_12194432_12195981_12196050_12196516_12196655_12198222_12198378_12199189_12199246_12204885_12204994_12209541_12209588_12234860_12235053_12237514_12237721_12247221_12247275_12249956_12250014_12252320_12252365_12254891_12254937_12258263_12258390_12260773_12260820_12261979_12262042_12266868_12266993_12270043_12270145_12305648_12305783_12306387
ES.18355.1	chr2	-	2341	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	2	1	2	-1	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12424279	12352074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ES.18355.11	chr2	-	2075	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	13	256	-5	113	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTGGGAACTTCTATT	NA	False	NA	-1	True	AATAAA	-24	NA	12424268	12352329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ES.18355.12	chr2	-	5286	9	NNC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-2479	113	intron_retention	FALSE	non_canonical	0	0	junction_8	54.398845346202	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTGGGAACTTCTATT	NA	False	NA	-1	True	AATAAA	-24	NA	12405175	12352329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12403435_12403477
ES.18355.13	chr2	-	2093	15	NNC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-1	112	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	43.3255356668135	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGTGGGAACTTCTAT	NA	False	NA	-2	True	AATAAA	-23	NA	12424261	12352330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405914_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ES.18355.14	chr2	-	2159	16	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	4	112	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	52.541877477769	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGTGGGAACTTCTAT	NA	False	NA	-2	True	AATAAA	-23	NA	12424217	12352330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12354517_12354654_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ES.18355.15	chr2	-	1377	7	NIC	ENSMUSG00000026767.13	novel	908	9	NA	NA	3	110	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	70.580332482451	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTATGTGGGAACTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	12424278	12352332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
ES.18355.17	chr2	-	1977	15	NNC	ENSMUSG00000026767.13	novel	2316	15	NA	NA	2	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.2008403281463	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATAAAATAAA	NA	False	NA	-39	True	NA	NA	NA	12424219	12352367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408969_12410670_12410732_12414811_12414892_12423969
ES.18355.18	chr2	-	1457	9	NIC	ENSMUSG00000026767.13	novel	1843	10	NA	NA	-2	75	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	58.7808429677561	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATAAAATAAA	NA	False	NA	-39	True	NA	NA	NA	12424248	12352367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12391419_12391491_12400989_12401070_12402303_12402378_12423969
ES.18355.19	chr2	-	5494	15	NNC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	2726	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.9531870637526	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAATAAAATAAA	NA	False	NA	-39	True	NA	NA	NA	12421334	12352367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12417578
ES.18355.2	chr2	-	1696	8	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	51.1843407175855	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12424267	12352074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12423969
ES.18355.20	chr2	-	1771	13	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-7	30	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	46.1163986258925	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGGCTATTTGGTAA	NA	False	NA	-84	True	AATAAA	-12	NA	12424270	12352412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12410670_12410732_12414811_12414892_12423969
ES.18355.21	chr2	-	1107	3	NNC	ENSMUSG00000026767.13	novel	850	9	NA	NA	863	356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTTTGTTTTATTT	NA	False	NA	NA	False	AGTAAA	-19	NA	12360859	12355384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_12355648_12355739_12355812_12360087
ES.18355.22	chr2	-	3868	1	Intergenic	novelGene_15246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCAGTCGCTGCATCAG	NA	False	NA	NA	False	NA	NA	NA	12422540	12418672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_12418700_12422500
ES.18355.3	chr2	-	1962	12	FSM	ENSMUSG00000026767.13	ENSMUST00000154899.7	1984	12	21	1	4	-1	multi-exon	FALSE	canonical	1	5	junction_9	46.6171323098428	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12424238	12352074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12410670_12410732_12414811_12414892_12423969
ES.18355.5	chr2	-	4330	1	NIC	ENSMUSG00000026767.13	novel	2257	14	NA	NA	5318	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12356404	12352074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12352100_12356400
ES.18355.6	chr2	-	1586	9	NIC	ENSMUSG00000026767.13	novel	1843	10	NA	NA	1655	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	70.3806614063835	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCACTTTTACATTT	NA	False	NA	-23	True	AATAAA	-18	NA	12401041	12352074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12354517_12354654_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989
ES.18355.7	chr2	-	2255	14	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	41.2504258539969	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTGCACTTTTACATT	NA	False	NA	-24	True	AATAAA	-17	NA	12424266	12352075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ES.18355.8	chr2	-	1567	7	NIC	ENSMUSG00000026767.13	novel	1843	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	59.7543582789853	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTTGCACTTTTACAT	NA	False	NA	-25	True	AATAAA	-16	NA	12424221	12352076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12391419_12391491_12423969
ES.18355.9	chr2	-	2187	14	NIC	ENSMUSG00000026767.13	novel	2344	15	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	45.290776520941	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTTGCACTTTTACAT	NA	False	NA	-25	True	AATAAA	-16	NA	12424207	12352076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12423969
ES.18356.1	chr2	-	182	1	Intergenic	novelGene_15247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12430249	12430067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_12430100_12430200
ES.18357.1	chr2	-	181	1	Intergenic	novelGene_15248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGGGCAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	12880553	12880372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_12880400_12880600
ES.18358.1	chr2	+	1900	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	-35	-633	-35	-1	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4677	False	NA	NA	False	AATAAA	-38	NA	12928816	13006424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.10	chr2	+	3447	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	46	-2261	-5	-214	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGTTCTATGTGAAACT	4758	False	NA	NA	False	NA	NA	NA	12928897	13008052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.11	chr2	+	2265	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	48	-1081	-3	202	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATGTTAGTTAAAATG	4760	False	NA	NA	False	AATAAA	-7	NA	12928899	13006872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.12	chr2	+	1612	6	NIC	ENSMUSG00000026730.13	novel	1232	6	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.9525723847714	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4761	False	NA	NA	False	AATAAA	-38	NA	12928900	13006424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_12929010_12979179_12979265_12982970_12983225_12985103_12985370_12999560_12999702_13005667
ES.18358.13	chr2	+	842	1	NIC	ENSMUSG00000026730.13	novel	1232	6	NA	NA	2	-55585	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	4774	False	NA	NA	False	TATAAA	-16	NA	12928913	12929755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_12928900_12929800
ES.18358.14	chr2	+	3097	4	NIC	ENSMUSG00000026730.13	novel	3571	5	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	21.1712593442672	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGAGTCTAAATGTAT	4776	False	NA	NA	False	AATAAA	-14	NA	12928915	13008263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_12929010_12985103_12985370_12999560_12999702_13005667
ES.18358.15	chr2	+	4449	4	ISM	ENSMUSG00000026730.13	ENSMUST00000028063.7	1652	5	6	3233	5	-2599	5prime_fragment	FALSE	canonical	2	8	junction_1	20.3688214899363	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGCTTGTGTATTTC	4777	False	NA	NA	False	CATAAA	-20	NA	12928916	13003192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560
ES.18358.2	chr2	+	1467	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-67	2171	-16	303	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATGTTTCCAAAC	4696	False	NA	NA	False	AATAAA	-13	NA	12928835	13006095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.3	chr2	+	1795	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-66	1842	-15	-1	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4697	False	NA	NA	False	AATAAA	-38	NA	12928836	13006424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.4	chr2	+	1239	5	FSM	ENSMUSG00000026730.13	ENSMUST00000114796.9	916	5	-20	-303	8	303	multi-exon	FALSE	canonical	0	0	junction_2	24.0455297300766	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATGTTTCCAAAC	4720	False	NA	NA	False	AATAAA	-13	NA	12928859	13006095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12982970_12983225_12985103_12985370_12999560_12999702_13005667
ES.18358.5	chr2	+	3612	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-42	1	9	-1	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGTCTAAATGTATTC	4721	False	NA	NA	False	AATAAA	-16	NA	12928860	13008265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.6	chr2	+	1306	4	NIC	ENSMUSG00000026730.13	novel	3571	5	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	21.1712593442672	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTTTCCACTTA	4728	False	NA	NA	False	AATAAA	-38	NA	12928867	13006424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_12929010_12985103_12985370_12999560_12999702_13005667
ES.18358.7	chr2	+	1515	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	21	-304	0	303	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATGTTTCCAAAC	4733	False	NA	NA	False	AATAAA	-13	NA	12928872	13006095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.8	chr2	+	3683	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	22	-2473	1	-2	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGAGTCTAAATGTATT	4734	False	NA	NA	False	AATAAA	-15	NA	12928873	13008264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18358.9	chr2	+	3285	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	29	-2082	1	-393	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTGCATGGTTCTGT	4741	False	NA	NA	False	AATATA	-23	NA	12928880	13007873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ES.18359.1	chr2	-	6562	1	Intergenic	novelGene_15249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACAAACCAACAAG	NA	False	NA	NA	False	AATAAA	-41	NA	12950471	12943909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_12943900_12950500
ES.1836.1	chr1	-	159	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	168276516	168276357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_168276400_168276500
ES.18360.1	chr2	-	1491	1	Intergenic	novelGene_15250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAAATGAAGC	NA	False	NA	NA	False	NA	NA	NA	12991929	12990438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_12990400_12991900
ES.18361.1	chr2	+	194	1	Intergenic	novelGene_15251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGAGTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	13264720	13264914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_13264700_13264900
ES.18362.1	chr2	-	3044	10	NNC	ENSMUSG00000026727.11	novel	1546	9	NA	NA	-10	1880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.540503632614	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAACGAAATTGGTATAT	7054	False	NA	NA	False	ATTAAA	-13	NA	13276215	13079751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13081582_13082143_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.10	chr2	-	891	8	ISM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	132	92913	8	-2452	5prime_fragment	FALSE	canonical	3	310	junction_4	20.9469689980217	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCACCTCGTGG	7175	False	NA	NA	False	TTTAAA	-11	NA	13276094	13174735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.11	chr2	-	7093	2	ISM	ENSMUSG00000026727.11	ENSMUST00000162223.8	1505	7	54123	-6186	54011	6186	3prime_fragment	FALSE	canonical	3	354	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATATTTAGTATATAAAC	2694	False	NA	NA	False	CATAAA	-20	NA	13222021	13214624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_13221696_13221999
ES.18362.12	chr2	-	5431	7	FSM	ENSMUSG00000026727.11	ENSMUST00000162223.8	1505	7	-9	-3917	-9	3917	multi-exon	FALSE	canonical	3	310	junction_3	21.3911975666005	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTAGAGTGCTAGATAT	7116	False	NA	NA	False	NA	NA	NA	13276153	13216893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.13	chr2	-	860	8	NNC	ENSMUSG00000026727.11	novel	773	8	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	125.274555619704	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTGTCATTTCTTCT	7161	False	NA	NA	False	NA	NA	NA	13276108	13220814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13220976_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.14	chr2	-	3992	1	FSM	ENSMUSG00000026727.11	ENSMUST00000195538.2	537	1	-133	-3322	-14	23	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGAAACAATTCTGTAC	7029	False	NA	NA	False	NA	NA	NA	13276240	13272248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13272200_13276200
ES.18362.2	chr2	-	1604	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	-14	-44	-14	44	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGGTGTGCACATTTTT	7029	False	NA	-1	True	AATAAA	-14	NA	13276240	13081778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.3	chr2	-	1662	10	NNC	ENSMUSG00000026727.11	novel	1546	9	NA	NA	-3	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.383936340966	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAACCTA	7144	False	NA	15	True	AATAAA	-34	NA	13276125	13081800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13082419_13092518_13092714_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.5	chr2	-	1537	10	NIC	ENSMUSG00000026727.11	novel	1546	9	NA	NA	8	22	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	135.725212592699	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAACCTA	7175	False	NA	15	True	AATAAA	-34	NA	13276094	13081800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13229361_13229463_13246555_13246607_13275721_13275834_13276010
ES.18362.6	chr2	-	1136	6	NIC	ENSMUSG00000026727.11	novel	1546	9	NA	NA	-4	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	143.981387686048	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAACCTA	7158	False	NA	15	True	AATAAA	-34	NA	13276111	13081800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13082419_13174808_13174942_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.7	chr2	-	1092	6	NIC	ENSMUSG00000026727.11	novel	1604	8	NA	NA	4	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	140.144211439503	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATTATGTTCATTTAA	7154	False	NA	-59	True	ATTAAA	-18	NA	13276115	13081874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13275721_13275834_13276010
ES.18362.8	chr2	-	1296	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	111	139	4	44	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGTCACAGTTAACAC	7154	False	NA	NA	False	ATTAAA	-14	NA	13276115	13081961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18362.9	chr2	-	2160	9	Fusion	ENSMUSG00000026727.11_ENSMUSG00000102691.2	novel	3458	9	NA	NA	4	-1	multi-exon	FALSE	canonical	1	1	junction_1	117.631243192444	128	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACAATTGTTTGCAT	7154	False	NA	NA	False	AATAAA	-16	NA	13276115	13166562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_13167884_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ES.18363.1	chr2	-	3919	1	Genic_Genomic	ENSMUSG00000026726.11	novel	NA	NA	NA	NA	179268	3897	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGAGGCCTGGACAATG	2099	False	NA	NA	False	NA	NA	NA	13281170	13277251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_13277300_13281200
ES.18364.1	chr2	-	183	1	Intergenic	novelGene_15252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	13512749	13512566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_13512600_13512700
ES.18365.1	chr2	-	3708	12	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.4437178262115	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAATCACCATTGTGAAA	9035	False	NA	NA	False	ATTAAA	-17	NA	13549473	13513830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13516108_13516175_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18365.10	chr2	-	1725	12	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	1	-2104	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	13.1840123565697	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATAATGATCCTTAG	9035	False	NA	NA	False	TATAAA	-11	NA	13549473	13515928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13529761_13529809_13530428_13530506_13538194_13538305_13549379
ES.18365.11	chr2	-	1484	10	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	11	-2165	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	11.4998658070539	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATTTAAGAATGCTT	9058	False	NA	NA	False	ATTAAA	-21	NA	13549450	13515989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13549379
ES.18365.2	chr2	-	3303	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	6	479	1	-479	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACTAGAATACCAGTCA	9035	False	NA	NA	False	AGTAAA	-30	NA	13549473	13514303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18365.3	chr2	-	2475	11	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	-14	-1149	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.6205335059977	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATTACTCTTTTTGTT	9015	False	NA	NA	False	ATTAAA	-19	NA	13549493	13514973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13516121_13516188_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13549379
ES.18365.4	chr2	-	2632	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	7	1149	2	-1149	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATTACTCTTTTTGTT	9036	False	NA	NA	False	ATTAAA	-19	NA	13549472	13514973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18365.5	chr2	-	2563	12	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	1	-1151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.4437178262115	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATTACTCTTTTTG	9035	False	NA	NA	False	ATTAAA	-17	NA	13549473	13514975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13516121_13516188_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18365.6	chr2	-	2609	13	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	2	-1151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.2559187057206	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATTACTCTTTTTG	9036	False	NA	NA	False	ATTAAA	-17	NA	13549472	13514975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13516121_13516188_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13529761_13529809_13530428_13530506_13538194_13538305_13549379
ES.18365.7	chr2	-	1930	10	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	1	-1742	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	11.4998658070539	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGATTCTTGATGATTG	9035	False	NA	NA	False	NA	NA	NA	13549473	13515566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13549379
ES.18365.8	chr2	-	1671	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	14	2103	-4	-2103	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATAATGATCCTTAGA	9043	False	NA	NA	False	TATAAA	-12	NA	13549465	13515927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18365.9	chr2	-	1621	12	NNC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	-5	-2104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.4437178262115	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATAATGATCCTTAG	9024	False	NA	NA	False	TATAAA	-11	NA	13549484	13515928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13516121_13516188_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ES.18366.1	chr2	+	1854	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGTTTTGGTGTG	8	False	NA	6	True	AATAAA	-6	NA	13578760	13587629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ES.18366.2	chr2	+	1919	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	272	2	-57	-1	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTTGGTGTGTTATTT	-7	True	NA	12	True	AATAAA	-12	NA	13579034	13587635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ES.18366.3	chr2	+	1831	9	NNC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.5583583467176	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTGTTATTTTATAA	79	False	NA	17	True	AATAAA	-17	NA	13579120	13587640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_13579806_13580358_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ES.18366.5	chr2	+	2227	8	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	229	junction_1	35.8682396033719	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGTTTTGGTGTG	80	False	NA	6	True	AATAAA	-6	NA	13579121	13587629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585495_13586423_13586510_13587283
ES.18367.1	chr2	-	1732	1	Antisense	novelGene_ENSMUSG00000026728.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13588148	13586416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_13586400_13588100
ES.18368.1	chr2	-	7524	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	105	-11	105	11	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGCATTGTTATTTC	NA	False	NA	NA	False	NA	NA	NA	13798770	13655820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.10	chr2	-	2831	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	527	4260	-244	1873	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGCTTGTTGTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	13798348	13660091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.11	chr2	-	2332	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	204	5082	204	1051	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTCTCACATGTTTTA	NA	False	NA	NA	False	CATAAA	-16	NA	13798671	13660913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.12	chr2	-	2118	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	216	5284	216	849	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCCTGCTTCTGATTC	NA	False	NA	NA	False	AAGAAA	-18	NA	13798659	13661115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.13	chr2	-	2133	7	NIC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	106	844	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.0975483311662	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAATGTGCCTGCTTCT	NA	False	NA	NA	False	AAGAAA	-13	NA	13798769	13661120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13797564_13797664_13798154
ES.18368.14	chr2	-	1715	8	NNC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	34	844	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	25.6005420860973	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAATGTGCCTGCTTCT	NA	False	NA	NA	False	AAGAAA	-13	NA	13798070	13661120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13797963
ES.18368.2	chr2	-	6994	8	NNC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	-244	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	26.2942532714287	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACACATCGTTGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	13798348	13655834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677345_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.3	chr2	-	5737	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	206	1675	206	-1675	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTCTGTGTCATTACT	NA	False	NA	NA	False	GATAAA	-17	NA	13798669	13657506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.4	chr2	-	5710	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	106	1802	106	-1802	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTGTTATATCTCATA	NA	False	NA	NA	False	ATTAAA	-17	NA	13798769	13657633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.5	chr2	-	3678	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	47	3893	47	2240	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAGTACACCAGA	NA	False	NA	NA	False	NA	NA	NA	13798828	13659724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.6	chr2	-	3392	7	NIC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	127	2124	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.0975483311662	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTCTTTTATGCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	13798748	13659840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13797564_13797664_13798154
ES.18368.7	chr2	-	3501	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	106	4011	106	2122	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGAGGCTCTTTTATGCT	NA	False	NA	NA	False	AATAAA	-27	NA	13798769	13659842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.8	chr2	-	3290	7	NIC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	221	2119	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.2498725787031	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATAGAGGCTCTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	13798654	13659845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_13662102_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ES.18368.9	chr2	-	2629	2	NNC	ENSMUSG00000003418.12	novel	7618	8	NA	NA	134624	2119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATAGAGGCTCTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	13663480	13659845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_13662102_13663107
ES.18369.1	chr2	+	3712	14	NNC	ENSMUSG00000026718.18	novel	632	4	NA	NA	-18440	945	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	63.1852727953663	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTTAGTTACGTCAC	NA	False	NA	14	True	AATAAA	-14	NA	14060468	14153296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14060569_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.10	chr2	+	5007	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	11	-18	1	18	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGTCTTAATTTTCAG	4693	False	NA	NA	False	TATAAA	-35	NA	14078919	14154463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.11	chr2	+	4997	14	NNC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.8318717733272	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTATCTTTGTTTCTTT	4702	False	NA	NA	False	TATAAA	-13	NA	14078928	14154441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142925_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.12	chr2	+	3082	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	29	1889	19	205	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTATTCTATTATT	4711	False	NA	NA	False	CATAAA	-17	NA	14078937	14152556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.13	chr2	+	2917	15	NNC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	79.6516651119237	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4722	False	NA	25	True	ATTAAA	-27	NA	14078948	14152349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138466_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.14	chr2	+	2778	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	64.5213143077542	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4723	False	NA	25	True	ATTAAA	-27	NA	14078949	14152349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.15	chr2	+	2881	14	NNC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.8318717733272	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4726	False	NA	25	True	ATTAAA	-27	NA	14078952	14152349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142925_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.16	chr2	+	7037	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	36	943	intron_retention	FALSE	canonical	3	190	junction_9	22.0749984270793	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTCTTAGTTACGTC	4728	False	NA	12	True	AATAAA	-12	NA	14078954	14153294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.17	chr2	+	3670	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	46	1284	36	810	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATCTTACCCTTTAAGT	4728	False	NA	NA	False	NA	NA	NA	14078954	14153161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.18	chr2	+	1251	8	ISM	ENSMUSG00000026718.18	ENSMUST00000028050.14	3981	13	-45	12972	36	3	5prime_fragment	FALSE	canonical	3	216	junction_7	13.6993966796993	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCTACGTCTGCCAG	4728	False	NA	NA	False	AATAAA	-13	NA	14078954	14136204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834
ES.18369.19	chr2	+	2533	12	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	37	-145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	86.3113717453383	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTCAGTCTCCTGTC	4729	False	NA	1	True	AAGAAA	-13	NA	14078955	14152206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14120627_14120704_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.2	chr2	+	6412	1	Antisense	novelGene_ENSMUSG00000063275.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCGATTTCATGTTG	NA	False	NA	NA	False	NA	NA	NA	14060470	14066882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_14060500_14066900
ES.18369.20	chr2	+	6351	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	37	258	intron_retention	FALSE	canonical	3	190	junction_9	22.0749984270793	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTAGCTTCCCTTCTG	4729	False	NA	NA	False	TTTAAA	-30	NA	14078955	14152609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.21	chr2	+	3869	15	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	37	944	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	78.2569029360532	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTCTTAGTTACGTCA	4729	False	NA	13	True	AATAAA	-13	NA	14078955	14153295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138453_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.22	chr2	+	5808	13	FSM	ENSMUSG00000026718.18	ENSMUST00000028050.14	3981	13	-44	-1783	37	-1392	multi-exon	FALSE	canonical	3	181	junction_8	25.5357864356845	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTTTTCCTGTTCATC	4729	False	NA	NA	False	NA	NA	NA	14078955	14150959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512
ES.18369.23	chr2	+	10218	14	FSM	ENSMUSG00000026718.18_ENSMUSG00000103901.2	ENSMUST00000102960.11	5000	14	65	-5283	-26	1620	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAACAACTCAAAGAATTA	4747	False	NA	NA	False	AATAAA	-16	NA	14078973	14159728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.25	chr2	+	2797	14	NNC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.2824757332084	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4768	False	NA	25	True	ATTAAA	-27	NA	14078994	14152349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122320_14133350_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.26	chr2	+	6044	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	3	-2	intron_retention	FALSE	canonical	3	190	junction_9	22.0749984270793	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTCTGATTTTGT	4776	False	NA	25	True	ATTAAA	-27	NA	14079002	14152349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.27	chr2	+	7492	14	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	6	-1	intron_retention	FALSE	canonical	3	17	junction_8	60.3000387608185	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATCTTTGTTTCTTTTTT	4779	False	NA	NA	False	TATAAA	-16	NA	14079005	14154444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.28	chr2	+	2714	14	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	42	-7	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	92.7549421321626	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAATTTATATTCTGAT	4848	False	NA	20	True	ATTAAA	-22	NA	14079074	14152344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138453_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.29	chr2	+	3039	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	174	1787	50	307	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTTTTCTTTTTG	4856	False	NA	NA	False	NA	NA	NA	14079082	14152658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.3	chr2	+	4021	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	-170	1149	-170	945	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTTAGTTACGTCAC	4512	False	NA	14	True	AATAAA	-14	NA	14078738	14153296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.30	chr2	+	3962	14	NNC	ENSMUSG00000026718.18	novel	711	7	NA	NA	-14	943	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	62.6865971915498	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTCTTAGTTACGTC	4997	False	NA	12	True	AATAAA	-12	NA	14079223	14153294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_14079576_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.31	chr2	+	209	1	Intergenic	novelGene_15253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTCAGTACTGATC	9780	False	NA	NA	False	NA	NA	NA	14084006	14084215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_14084000_14084200
ES.18369.32	chr2	+	1560	1	Intergenic	novelGene_15254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATCATATAAGT	NA	False	NA	NA	False	NA	NA	NA	14130047	14131607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_14130000_14131600
ES.18369.33	chr2	+	933	1	ISM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	74182	422	14158	-422	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGGTCTTTCATGGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	14153090	14154023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_14153100_14154000
ES.18369.34	chr2	+	2056	1	FSM	ENSMUSG00000103901.2	ENSMUST00000194683.2	3478	1	1419	3	1419	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGAACGTGAGGGCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	14156049	14158105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14156000_14158100
ES.18369.4	chr2	+	2914	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	-8	2094	-8	0	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4674	False	NA	27	True	ATTAAA	-29	NA	14078900	14152351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.5	chr2	+	2773	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	-8	2235	-8	-141	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCTCCTGTCATTT	4674	False	NA	5	True	AAGAAA	-17	NA	14078900	14152210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.6	chr2	+	3442	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	1	1557	1	537	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATATTTATAGCTCTTTC	4683	False	NA	NA	False	NA	NA	NA	14078909	14152888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.7	chr2	+	2967	15	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	78.2569029360532	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATTCTGATTTTGTT	4686	False	NA	26	True	ATTAAA	-28	NA	14078912	14152350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138453_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.8	chr2	+	2422	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	4	2574	4	-480	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACCATGTATGTTATA	4686	False	NA	NA	False	ATTAAA	-26	NA	14078912	14151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.18369.9	chr2	+	4840	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	4	156	4	-156	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTACACCTCCTTTT	4686	False	NA	NA	False	NA	NA	NA	14078912	14154289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ES.1837.1	chr1	+	175	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGTGCAATTTCA	NA	False	NA	NA	False	NA	NA	NA	168398472	168398647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_168398500_168398600
ES.18370.1	chr2	-	1325	5	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	14	460	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8018691180654	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATCAGTGTTGGACG	NA	False	NA	NA	False	TATAAA	-23	NA	14060817	14031181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14060541
ES.18370.2	chr2	-	841	5	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.8018691180654	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTGCATTGTTTCTTG	NA	False	NA	-3	True	AATAAA	-18	NA	14060794	14031642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14060541
ES.18370.3	chr2	-	918	6	NNC	ENSMUSG00000063275.16	novel	871	6	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.8939228472091	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCATGGATTGCATTG	NA	False	NA	-10	True	AATAAA	-11	NA	14060817	14031649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_14031818_14040589_14040769_14049593_14049683_14049921_14050067_14050154_14050216_14060541
ES.18371.1	chr2	-	719	2	NNC	ENSMUSG00000086657.3	novel	801	2	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGGCATATTATAATT	NA	False	NA	NA	False	AATAAA	-17	NA	14078669	14075141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_14075592_14078400
ES.18371.2	chr2	-	713	2	FSM	ENSMUSG00000086657.3	ENSMUST00000152524.2	801	2	76	12	-10	-12	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTGCTAGGATTAAAATG	NA	False	NA	NA	False	AATAAA	-4	NA	14078669	14075154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_14075592_14078393
ES.18372.1	chr2	-	10203	1	Antisense	novelGene_ENSMUSG00000026718.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTCTAAGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	14133829	14123626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_14123600_14133800
ES.18372.2	chr2	-	6440	2	Antisense	novelGene_ENSMUSG00000026718.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTCTAAGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	14130272	14123626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_14129997_14130202
ES.18372.3	chr2	-	3416	2	Antisense	novelGene_ENSMUSG00000026718.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14127553	14123669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_14125537_14126004
ES.18373.1	chr2	-	319	1	Intergenic	novelGene_15255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGAAAGCCTTGATAT	NA	False	NA	NA	False	NA	NA	NA	14169273	14168954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_14169000_14169300
ES.18374.1	chr2	-	178	1	Intergenic	novelGene_15256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	14270484	14270306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_14270300_14270500
ES.18375.1	chr2	+	4366	1	Intergenic	novelGene_15257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATTAGGGAAACAAC	NA	False	NA	NA	False	NA	NA	NA	14731665	14736031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_14731700_14736000
ES.18376.1	chr2	+	2705	1	Intergenic	novelGene_15258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGGTGTCACATTGA	NA	False	NA	NA	False	AATAAA	-10	NA	14892892	14895597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_14892900_14895600
ES.18377.1	chr2	-	7832	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-13	-4922	-13	4922	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTATTTGTTTCCGTTTG	965	False	NA	NA	False	NA	NA	NA	15054104	14995019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.10	chr2	-	2479	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-56	474	-24	-474	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAAGGTGAAGTCTA	922	False	NA	-6	True	AATAAA	-20	NA	15054147	15000415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.11	chr2	-	2469	12	NNC	ENSMUSG00000026707.16	novel	3149	12	NA	NA	16	-478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.6751541026359	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTTTGAAAGGTGAAG	962	False	NA	-10	True	AATAAA	-16	NA	15054107	15000419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047115_15047568_15047679_15051958_15052115_15053805
ES.18377.12	chr2	-	2460	12	NNC	ENSMUSG00000026707.16	novel	3042	12	NA	NA	62	-478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.0971665451509	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTTTGAAAGGTGAAG	1041	False	NA	-10	True	AATAAA	-16	NA	15054028	15000419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15047574_15047679_15051958_15052115_15053732
ES.18377.17	chr2	-	1720	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	10	1167	9	-2	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTGGGGCTTTTTC	988	False	NA	-2	True	AATGAA	-15	NA	15054081	15001108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.2	chr2	-	4114	10	NNC	ENSMUSG00000026707.16	novel	2420	4	NA	NA	6	4920	intron_retention	FALSE	canonical	0	0	junction_1	21.6698003431868	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTATTTGTTTCCGTT	985	False	NA	NA	False	NA	NA	NA	15054084	14995021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_14995945_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.4	chr2	-	7736	11	NIC	ENSMUSG00000026707.16	novel	2897	11	NA	NA	6	4919	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	20.4257190815893	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTATTTGTTTCCGT	985	False	NA	NA	False	NA	NA	NA	15054084	14995022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053805
ES.18377.5	chr2	-	2900	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-5	2	-5	-2	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATTTTGAAAAATATC	973	False	NA	NA	False	NA	NA	NA	15054096	14999943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.6	chr2	-	4460	9	NIC	ENSMUSG00000026707.16	novel	2897	11	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_3	23.0597051152004	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATTTTGAAAAATATC	985	False	NA	NA	False	NA	NA	NA	15054084	14999943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.7	chr2	-	3591	7	NNC	ENSMUSG00000026707.16	novel	2897	11	NA	NA	11269	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.095076674274	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGACTTGCTTCCATC	6475	False	NA	NA	False	NA	NA	NA	15042821	15000160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15035275_15035394_15041085
ES.18377.8	chr2	-	4174	10	NIC	ENSMUSG00000026707.16	novel	3149	12	NA	NA	4	-468	intron_retention	FALSE	canonical	3	48	junction_2	8.45905169363301	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGAAGTCTAGTGATT	950	False	NA	0	True	AATAAA	-26	NA	15054119	15000409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ES.18377.9	chr2	-	2656	12	NNC	ENSMUSG00000026707.16	novel	3149	12	NA	NA	3	-470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.3658760728627	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGTGAAGTCTAGTGA	949	False	NA	-2	True	AATAAA	-24	NA	15054120	15000411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042712_15043039_15044543_15044654_15047037_15047115_15047574_15047679_15051958_15052115_15053805
ES.18378.1	chr2	+	7001	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	-17	-3	-17	3	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGTGTTTTCTTTTGG	4641	False	NA	19	True	AATAAA	-21	NA	15060033	15087270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.10	chr2	+	7030	6	NNC	ENSMUSG00000017418.15	novel	6981	6	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	3	junction_1	39.716998879573	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTAGCCTGTGTT	4760	False	NA	10	True	AATAAA	-12	NA	15060152	15087261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_15060543_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.11	chr2	+	2606	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	19	983	-5	612	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGTGTTGTAAATATA	4760	False	NA	NA	False	AGTAAA	-18	NA	15060152	15082994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.12	chr2	+	3031	1	ISM	ENSMUSG00000017418.15	ENSMUST00000017562.13	6933	6	26976	3051	1372	235	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGGGTTGAATCTATAA	NA	False	NA	NA	False	AATATA	-17	NA	15081181	15084212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_15081200_15084200
ES.18378.2	chr2	+	3731	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	-54	-69	-18	69	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTGCCATTTCCTTACC	4687	False	NA	NA	False	NA	NA	NA	15060079	15084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.3	chr2	+	2870	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	-43	781	-7	-781	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAATATTTAATGT	4698	False	NA	NA	False	ATTAAA	-26	NA	15060090	15083196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.4	chr2	+	3412	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	-43	239	-7	-239	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATGGGTGCCTTTGT	4698	False	NA	NA	False	TATAAA	-39	NA	15060090	15083738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.5	chr2	+	6903	6	FSM	ENSMUSG00000017418.15	ENSMUST00000128682.9	1035	6	-7	-5861	-7	0	multi-exon	FALSE	canonical	3	15	junction_2	39.1989795785554	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGCCTGTGTTTTCTTT	4698	False	NA	16	True	AATAAA	-18	NA	15060090	15087267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_15060386_15072949_15073011_15074668_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.6	chr2	+	7014	7	NNC	ENSMUSG00000017418.15	novel	6981	6	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_1	47.3110276080887	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTAGCCTGTGTT	4710	False	NA	10	True	AATAAA	-12	NA	15060102	15087261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_15060386_15064890_15064982_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.7	chr2	+	6905	6	NIC	ENSMUSG00000017418.15	novel	6981	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	4	junction_2	43.3663463990224	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTAGCCTGTGTTTT	4713	False	NA	12	True	AATAAA	-14	NA	15060105	15087263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_15060386_15072949_15073011_15074647_15074779_15077934_15078019_15079772_15079925_15081066
ES.18378.8	chr2	+	3355	7	NNC	ENSMUSG00000017418.15	novel	6981	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	41.2327404969508	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTAGCCTGTGTTTTCT	4739	False	NA	14	True	AATAAA	-16	NA	15060131	15087265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066_15082211_15085753
ES.18379.1	chr2	+	933	1	Intergenic	novelGene_15259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAGAAAATTATGT	NA	False	NA	NA	False	AATAAA	-7	NA	15090608	15091541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_15090600_15091500
ES.1838.1	chr1	-	6206	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168457011	168450805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_168450800_168457000
ES.18380.1	chr2	+	178	1	Intergenic	novelGene_15260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTGGTTCATAG	NA	False	NA	NA	False	NA	NA	NA	15883042	15883220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_15883000_15883200
ES.18381.1	chr2	+	8137	1	Intergenic	novelGene_15264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCGGACAACCACCTGAT	NA	False	NA	NA	False	NA	NA	NA	16029135	16037272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_16029100_16037300
ES.18381.2	chr2	+	7169	1	Intergenic	novelGene_15263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATGAAGCGGCTACAC	NA	False	NA	NA	False	NA	NA	NA	16029135	16036304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_16029100_16036300
ES.18382.1	chr2	-	6725	2	Intergenic	novelGene_15261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAAACTTGACTTAGCT	NA	False	NA	NA	False	NA	NA	NA	16037677	16021905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_16025302_16034348
ES.18382.2	chr2	-	5394	2	Intergenic	novelGene_15262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCAGTTATATCCCCCAA	NA	False	NA	NA	False	NA	NA	NA	16037657	16023217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_16025303_16034348
ES.18382.3	chr2	-	9473	1	FSM	ENSMUSG00000103865.2	ENSMUST00000193596.2	318	1	-6610	-2545	-6610	2545	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGACTCGCTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	16034846	16025373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_16025400_16034800
ES.18383.1	chr2	-	176	1	Intergenic	novelGene_15265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16076377	16076201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_16076200_16076400
ES.18384.1	chr2	+	159	1	Intergenic	novelGene_15266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	16313275	16313434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_16313300_16313400
ES.18385.1	chr2	-	3114	2	Intergenic	novelGene_15267	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	16328289	16325122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_16325312_16325364
ES.18386.1	chr2	+	3132	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-656	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	16.2016942928566	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACACTTTTGGTTCAAA	3689	False	NA	9	True	AATAAA	-22	NA	16360458	16756495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_16360983_16361298_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.10	chr2	+	5741	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	-6	1212	-6	-1212	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGCAAGATTACTTTA	93	False	NA	NA	False	ATTAAA	-15	NA	16361108	16759438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.11	chr2	+	3037	1	Genic_Genomic	ENSMUSG00000026748.14	novel	NA	NA	NA	NA	-6	-392355	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTATTTTCCACTGTAA	93	False	NA	NA	False	AATATA	-44	NA	16361108	16364145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_16361100_16364100
ES.18386.12	chr2	+	6259	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	11	677	11	-677	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATGTCCAGATAATAC	110	False	NA	NA	False	AATAAA	-15	NA	16361125	16759973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.13	chr2	+	9536	14	FSM	ENSMUSG00000026748.14	ENSMUST00000114702.2	2146	14	-799	-6591	14	2609	multi-exon	FALSE	canonical	2	3	junction_10	16.8132801836092	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTGATGTATGTATTC	113	False	NA	NA	False	ATTAAA	-23	NA	16361128	16763259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708189_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.14	chr2	+	4748	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	29	2170	29	1812	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAAGGCATTAGAGGAA	128	False	NA	NA	False	AATAAA	-17	NA	16361143	16758480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.15	chr2	+	6095	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	31	821	31	-821	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTATCTCTTATGTA	130	False	NA	NA	False	AATAGA	-13	NA	16361145	16759829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.16	chr2	+	2722	14	FSM	ENSMUSG00000026748.14	ENSMUST00000114702.2	2146	14	-756	180	57	-12	multi-exon	FALSE	canonical	2	3	junction_10	16.8132801836092	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGGATCGACACTTTTG	156	False	NA	2	True	AATAAA	-15	NA	16361171	16756488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708189_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.17	chr2	+	5671	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-35	-677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3260643440876	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATGTCCAGATAATAC	476	False	NA	NA	False	AATAAA	-15	NA	16361892	16759973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_16362049_16394469_16394649_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.18	chr2	+	5584	10	ISM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	282282	1	-110	-1	3prime_fragment	FALSE	canonical	3	34	junction_4	9.88202008638185	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGATTCGTGCTTTTAC	NA	False	NA	NA	False	TATAAA	-22	NA	16643396	16760649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.19	chr2	+	3638	1	Intergenic	novelGene_15269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGCTCTTGTCATTCTG	3348	False	NA	NA	False	AATAAA	-28	NA	16762303	16765941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_16762300_16765900
ES.18386.2	chr2	+	3129	15	NNC	ENSMUSG00000026748.14	novel	2146	14	NA	NA	-656	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	19.3496295381929	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACACTTTTGGTTCAAA	3689	False	NA	9	True	AATAAA	-22	NA	16360458	16756495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708189_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.4	chr2	+	6212	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-255	-677	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATGTCCAGATAATAC	4090	False	NA	NA	False	AATAAA	-15	NA	16360859	16759973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.6	chr2	+	6877	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-244	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGATTCGTGCTTTTAC	4101	False	NA	NA	False	TATAAA	-22	NA	16360870	16760649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.7	chr2	+	3589	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	-38	3396	-38	586	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTCTTGTGGCTCTAA	61	False	NA	NA	False	NA	NA	NA	16361076	16757254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.8	chr2	+	6972	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	-26	1	-26	-1	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGATTCGTGCTTTTAC	73	False	NA	NA	False	TATAAA	-22	NA	16361088	16760649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18386.9	chr2	+	2800	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	-7	4154	-7	-4	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACACTTTTGGTTCAAAT	92	False	NA	10	True	AATAAA	-23	NA	16361107	16756496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ES.18387.1	chr2	-	184	1	Intergenic	novelGene_15268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATATATTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	16394646	16394462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_16394500_16394600
ES.18388.1	chr2	+	192	1	Intergenic	novelGene_15270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACTAAACTAAGA	NA	False	NA	NA	False	NA	NA	NA	17383339	17383531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17383300_17383500
ES.18389.1	chr2	-	6155	7	FSM	ENSMUSG00000053702.17	ENSMUST00000028080.12	5780	7	-33	-342	-33	342	multi-exon	FALSE	canonical	0	0	junction_2	1.80277563773199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGCTGTCACGTGGTT	NA	False	NA	NA	False	AATAAA	-27	NA	17735887	17348377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_17353682_17355515_17355623_17378995_17379168_17534720_17534829_17594903_17594989_17734179_17734275_17735603
ES.18389.2	chr2	-	3483	1	ISM	ENSMUSG00000053702.17	ENSMUST00000028080.12	5780	7	383504	148	13547	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTTAATTCATGTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	17352350	17348867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_17348900_17352400
ES.1839.1	chr1	-	2112	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	-36	-8	0	8	multi-exon	FALSE	canonical	3	87	junction_14	29.0531708199618	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGATGTTGTTTCTTC	NA	False	NA	-1	True	AATAAA	-34	NA	169359033	169325871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ES.1839.10	chr1	-	1977	14	NNC	ENSMUSG00000026683.15	novel	2405	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.6211164105961	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169359001	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337974_169338095_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ES.1839.11	chr1	-	2132	16	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	70.3566785900402	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTACTACTGTTATC	NA	False	NA	-18	True	AATAAA	-17	NA	169358975	169325888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353016_169356304_169356381_169356859_169356958_169358890
ES.1839.12	chr1	-	2793	8	NNC	ENSMUSG00000026683.15	novel	2405	14	NA	NA	7281	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	60.5191823190914	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTTTTACTACTGTTA	NA	False	NA	-20	True	AATAAA	-15	NA	169342670	169325890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341193_169341309
ES.1839.13	chr1	-	4887	14	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	-8	-13	intron_retention	TRUE	non_canonical	0	0	junction_7	52.1969415776363	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTTTTACTACTGT	NA	False	NA	-22	True	AATAAA	-13	NA	169359005	169325892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341193_169341313_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ES.1839.14	chr1	-	1720	15	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	10	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.1275923040802	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTAGTTCTTGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	169359023	169326250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326487_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ES.1839.15	chr1	-	1216	10	ISM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	35	12180	-1	3	5prime_fragment	FALSE	canonical	3	65	junction_9	38.1284379142101	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGTGGGTTTTTTTG	NA	False	NA	0	True	AATACA	-18	NA	169358998	169337682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ES.1839.2	chr1	-	2178	16	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	3	8	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_14	59.6642457609432	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGATGTTGTTTCTTC	NA	False	NA	-1	True	AATAAA	-34	NA	169358977	169325871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169357215_169357338_169358890
ES.1839.3	chr1	-	2145	15	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.7267590294575	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169358998	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351625_169352880_169353019_169356304_169356381_169358890
ES.1839.4	chr1	-	3758	8	NNC	ENSMUSG00000026683.15	novel	2405	14	NA	NA	6323	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	60.5191823190914	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169343628	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341203_169341322
ES.1839.5	chr1	-	1982	14	NNC	ENSMUSG00000026683.15	novel	2405	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	48.4992527240668	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169359006	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353021_169358910
ES.1839.6	chr1	-	2022	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	5	378	5	-1	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169359028	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ES.1839.7	chr1	-	2478	6	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	17984	1	8938	-1	3prime_fragment	FALSE	canonical	3	163	junction_5	8.84533775499839	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169341013	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735
ES.1839.8	chr1	-	3447	14	NIC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	87	junction_13	30.0293741794508	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169358996	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169326490_169332033_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ES.1839.9	chr1	-	2070	15	NNC	ENSMUSG00000026683.15	novel	2068	15	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.7701948805399	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTTATCCAGGATGT	NA	False	NA	-10	True	AATAAA	-25	NA	169359004	169325880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169326490_169332033_169332170_169333550_169333727_169334808_169334954_169337976_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ES.18390.1	chr2	+	177	1	Intergenic	novelGene_15271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACTTATTTTAATGTA	NA	False	NA	NA	False	NA	NA	NA	17804956	17805133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17805000_17805100
ES.18391.1	chr2	+	218	1	Intergenic	novelGene_15272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATTACCAAAAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	17850487	17850705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17850500_17850700
ES.18392.1	chr2	-	171	1	Intergenic	novelGene_15273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCTAGAAACTGATAG	NA	False	NA	NA	False	NA	NA	NA	17888283	17888112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_17888100_17888300
ES.18393.1	chr2	+	155	1	Intergenic	novelGene_15274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	17919377	17919532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17919400_17919500
ES.18394.1	chr2	-	157	1	Intergenic	novelGene_15275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCCCAAATTCCA	NA	False	NA	NA	False	NA	NA	NA	17940259	17940102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_17940100_17940300
ES.18395.1	chr2	+	1431	2	Intergenic	novelGene_15276	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGGAGGAAGGGTGTA	NA	False	NA	NA	False	NA	NA	NA	17940485	17942228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17940656_17940967
ES.18395.10	chr2	+	2537	6	Intergenic	novelGene_15285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.05941170815567	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCATTTCTGCAAGAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	17940977	17953264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17943897_17943980_17946408_17946488_17950200_17950380_17950982_17951239_17951431
ES.18395.11	chr2	+	2578	3	Intergenic	novelGene_15288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTATTAAGGAAGAGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	17940977	17953359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941097_17943897_17943980_17950982
ES.18395.12	chr2	+	2613	3	Intergenic	novelGene_15287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGTTTATATTGAACAC	NA	False	NA	NA	False	AAAAAG	-17	NA	17940977	17953308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17950200_17950380_17950982
ES.18395.13	chr2	+	2485	3	Intergenic	novelGene_15286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	17940977	17953277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17943897_17943980_17950982
ES.18395.14	chr2	+	3091	1	Intergenic	novelGene_15289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTCTGTACATGGTA	NA	False	NA	NA	False	NA	NA	NA	17942685	17945776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17942700_17945800
ES.18395.15	chr2	+	2612	4	Intergenic	novelGene_15291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTATGGCCAATTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	17949937	17957557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17950380_17950982_17951239_17951431_17951592_17955803
ES.18395.16	chr2	+	3308	1	Intergenic	novelGene_15292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGTGGTTTATATTGA	NA	False	NA	NA	False	AAAAAG	-13	NA	17949996	17953304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17950000_17953300
ES.18395.2	chr2	+	2797	3	Intergenic	novelGene_15277	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	18.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGAGCAATGTGTACA	NA	False	NA	NA	False	AATAAA	-26	NA	17940547	17953367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17940842_17940967_17941086_17950982
ES.18395.3	chr2	+	4315	5	Intergenic	novelGene_15278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.03108891324554	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTTGGTGTCATATG	NA	False	NA	-53	True	TATAAA	-12	NA	17940935	17952064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17943980_17946284_17946488_17950200_17950380_17950982_17951239_17951431
ES.18395.4	chr2	+	2278	3	Intergenic	novelGene_15279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	15	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGTGGTTTATATTGA	NA	False	NA	NA	False	AAAAAG	-13	NA	17940936	17953304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17950982_17951239_17951431
ES.18395.5	chr2	+	1910	4	Intergenic	novelGene_15280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCAGACTGTTTCCATG	NA	False	NA	NA	False	NA	NA	NA	17940937	17961748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17957584_17957699_17957975_17958093_17960217
ES.18395.6	chr2	+	2514	3	Intergenic	novelGene_15281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	17940945	17953277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17946408_17946488_17950982
ES.18395.7	chr2	+	1270	1	Intergenic	novelGene_15282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGGAGGAAGGGTGTA	NA	False	NA	NA	False	NA	NA	NA	17940958	17942228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941000_17942200
ES.18395.8	chr2	+	1057	3	Intergenic	novelGene_15283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	15	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTTGTTAGTCTGTC	NA	False	NA	2	True	NA	NA	NA	17940972	17952119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17950982_17951239_17951431
ES.18395.9	chr2	+	1246	2	Intergenic	novelGene_15284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTTGTTAGTCTGTC	NA	False	NA	2	True	NA	NA	NA	17940976	17952119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17941086_17950982
ES.18396.1	chr2	-	184	1	Intergenic	novelGene_15290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTTGGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	17947634	17947450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_17947400_17947600
ES.18397.1	chr2	-	178	1	Intergenic	novelGene_15293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGATATAGCTAGGC	NA	False	NA	NA	False	NA	NA	NA	17958305	17958127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_17958100_17958300
ES.18398.1	chr2	+	178	1	Intergenic	novelGene_15294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	17974647	17974825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_17974600_17974800
ES.18399.1	chr2	+	791	1	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTTACTTGTTTGAA	4463	False	NA	NA	False	NA	NA	NA	18032428	18033219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_18032400_18033200
ES.18399.2	chr2	+	3310	1	Antisense	novelGene_ENSMUSG00000054057.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4507	False	NA	NA	False	NA	NA	NA	18032472	18035782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_18032500_18035800
ES.184.1	chr1	+	5906	1	Antisense	novelGene_ENSMUSG00000026158.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-43	NA	23409239	23415145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_23409200_23415100
ES.1840.1	chr1	+	4540	4	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCCTGCTGCTAAACAG	NA	False	NA	NA	False	NA	NA	NA	169369136	169380605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_169369979_169376455_169376674_169377074_169378267_169378317
ES.1840.2	chr1	+	4424	4	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTAGTGCTTAACA	NA	False	NA	NA	False	NA	NA	NA	169369530	169380885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_169369983_169376459_169376674_169377074_169378275_169378327
ES.1840.3	chr1	+	5699	2	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTCATTCCTTCTG	NA	False	NA	NA	False	AAAACA	-24	NA	169378698	169385293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_169383426_169384321
ES.18400.1	chr2	+	4184	1	Antisense	novelGene_ENSMUSG00000054074.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	2750	False	NA	NA	False	NA	NA	NA	18051765	18055949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_18051800_18055900
ES.18400.10	chr2	+	4875	23	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	81.6712822668252	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	2863	False	NA	12	True	AATAAA	-16	NA	18059999	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.100	chr2	+	4964	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.7118853007201	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4661	False	NA	11	True	AATAAA	-15	NA	18069465	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212695_18213566_18213759_18215578
ES.18400.101	chr2	+	5076	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	82.9026805498112	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4661	False	NA	13	True	AATAAA	-17	NA	18069465	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215565
ES.18400.102	chr2	+	5108	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.7082444917862	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4661	False	NA	14	True	AATAAA	-18	NA	18069465	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18113987_18114082_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.103	chr2	+	4893	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	78.2350664573295	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4665	False	NA	14	True	AATAAA	-18	NA	18069469	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212695_18213566_18213759_18215578
ES.18400.104	chr2	+	6499	6	NIC	ENSMUSG00000026743.17	novel	637	7	NA	NA	24	3355	intron_retention	FALSE	canonical	3	39	junction_3	71.1629116886036	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	4666	False	NA	NA	False	NA	NA	NA	18069470	18134395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529
ES.18400.105	chr2	+	4736	20	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69.1046819232381	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4673	False	NA	12	True	AATAAA	-16	NA	18069477	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.106	chr2	+	5019	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.6006356040164	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4673	False	NA	11	True	AATAAA	-15	NA	18069477	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18116081_18116231_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.107	chr2	+	4800	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	69.0751669184176	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4673	False	NA	14	True	AATAAA	-18	NA	18069477	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.108	chr2	+	5125	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	89.4864592488098	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4674	False	NA	13	True	AATAAA	-17	NA	18069478	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202693_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.109	chr2	+	5221	26	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.4817176217521	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4676	False	NA	14	True	AATAAA	-18	NA	18069480	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18096978_18097126_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.11	chr2	+	5588	21	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-22	0	intron_retention	FALSE	canonical	2	2	junction_1	76.4620657581261	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	2889	False	NA	12	True	AATAAA	-16	NA	18060025	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.110	chr2	+	4726	19	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	81.78209907061	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4683	False	NA	11	True	AATAAA	-15	NA	18069487	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.112	chr2	+	5167	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	77.6099013424796	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGCTCTGTGCCCTGCC	4696	False	NA	9	True	AATAAA	-13	NA	18069500	18217196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18162168_18162381_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.113	chr2	+	4855	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	95.5781073425008	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4697	False	NA	10	True	AATAAA	-14	NA	18069501	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18128529_18128624_18130944_18131041_18140422_18140482_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.114	chr2	+	4708	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	94.5632279569212	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4697	False	NA	13	True	AATAAA	-17	NA	18069501	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.115	chr2	+	4941	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	75.7708730754211	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4705	False	NA	13	True	AATAAA	-17	NA	18069509	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175891_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215565
ES.18400.116	chr2	+	4859	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	75.5231586998319	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4705	False	NA	10	True	AATAAA	-14	NA	18069509	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.117	chr2	+	4420	17	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	86.324944794364	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4715	False	NA	11	True	AATAAA	-15	NA	18069519	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.118	chr2	+	4988	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.5469326116307	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4716	False	NA	13	True	AATAAA	-17	NA	18069520	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18185597_18185673_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.119	chr2	+	5012	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	83.5526755213551	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4722	False	NA	13	True	AATAAA	-17	NA	18069526	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.12	chr2	+	4659	21	NNC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.5595129682557	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	2902	False	NA	13	True	AATAAA	-17	NA	18060038	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18060183_18075935_18076016_18106268_18106324_18127054_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.120	chr2	+	5156	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.591317473663	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4741	False	NA	11	True	AATAAA	-15	NA	18069545	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131045_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.121	chr2	+	4408	17	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-56	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	87.4040321938868	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4755	False	NA	13	True	AATAAA	-17	NA	18069559	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.122	chr2	+	4960	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	82.8106524951148	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4794	False	NA	10	True	AATAAA	-14	NA	18069598	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.123	chr2	+	5074	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	73.8038579736577	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4795	False	NA	12	True	AATAAA	-16	NA	18069599	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.124	chr2	+	4859	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-16	8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	91.7495975895534	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGCCTTCTTTGTTGG	4795	False	NA	20	True	AATAAA	-24	NA	18069599	18217207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.125	chr2	+	5270	27	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	99.2665484095025	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4801	False	NA	13	True	AATAAA	-17	NA	18069605	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18142706_18142780_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.126	chr2	+	4649	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	66.5481599773569	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4801	False	NA	13	True	AATAAA	-17	NA	18069605	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.127	chr2	+	4801	22	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	94.7695378596015	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4802	False	NA	12	True	AATAAA	-16	NA	18069606	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.128	chr2	+	5162	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.1804434288893	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4802	False	NA	13	True	AATAAA	-17	NA	18069606	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18113987_18114082_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.129	chr2	+	4746	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	67.6141513988585	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4803	False	NA	11	True	AATAAA	-15	NA	18069607	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.13	chr2	+	4817	23	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	81.2082314762742	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	2902	False	NA	11	True	AATAAA	-15	NA	18060038	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.130	chr2	+	3758	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-7	335	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	87.6603673275443	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCAACTGGGGCTTTG	4804	False	NA	NA	False	ATTAAA	-16	NA	18069608	18216116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.131	chr2	+	4871	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	83.1403259533058	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4805	False	NA	11	True	AATAAA	-15	NA	18069609	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212695_18213566_18213759_18215578
ES.18400.132	chr2	+	3821	20	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	331	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	64.6003696292265	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	5178	False	NA	13	True	AATAAA	-17	NA	18069982	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.133	chr2	+	4744	21	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	519	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	76.41954920045	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	5366	False	NA	12	True	AATAAA	-16	NA	18070170	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18070325_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.134	chr2	+	5121	22	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	521	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	61.7197969320487	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	5368	False	NA	13	True	AATAAA	-17	NA	18070172	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18070670_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.135	chr2	+	5182	23	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	529	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	83.4929105715119	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	5376	False	NA	13	True	AATAAA	-17	NA	18070180	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18070670_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.136	chr2	+	159	1	Intergenic	novelGene_15295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	7802	False	NA	NA	False	NA	NA	NA	18072606	18072765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18072600_18072800
ES.18400.137	chr2	+	4238	17	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	6321	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	79.2162536588925	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	2031	False	NA	13	True	AATAAA	-17	NA	18075972	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18076016_18114592_18114703_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.138	chr2	+	4447	19	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-22252	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	62.5680863707591	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	543	False	NA	11	True	AATAAA	-15	NA	18106267	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.139	chr2	+	1783	2	Genic_Genomic	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-14508	1298	multi-exon	TRUE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGTTCTTAAGTAGT	8287	False	NA	NA	False	NA	NA	NA	18114011	18116000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_18114082_18114287
ES.18400.14	chr2	+	5121	23	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	-499	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	60.3712344615648	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	3901	False	NA	10	True	AATAAA	-14	NA	18068705	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069046_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.140	chr2	+	181	1	Intergenic	novelGene_15299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGTAAGT	8368	False	NA	NA	False	NA	NA	NA	18114092	18114273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18114100_18114300
ES.18400.141	chr2	+	4049	15	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	45	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.4570847245162	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	NA	False	NA	14	True	AATAAA	-18	NA	18128564	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18128624_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.142	chr2	+	6003	17	NNC	ENSMUSG00000026743.17	novel	509	4	NA	NA	7666	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	82.21465806047	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	8813	False	NA	13	True	AATAAA	-17	NA	18138632	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.143	chr2	+	4156	16	NIC	ENSMUSG00000026743.17	novel	509	4	NA	NA	13110	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	63.5918932639129	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	18144076	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.144	chr2	+	5536	15	ISM	ENSMUSG00000026743.17	ENSMUST00000114671.8	5063	24	80690	-1	19170	1	3prime_fragment	FALSE	canonical	3	178	junction_1	30.9133911938183	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	18150136	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.146	chr2	+	5374	12	NNC	ENSMUSG00000026743.17	novel	509	4	NA	NA	-2425	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.2461306035123	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	361	False	NA	13	True	AATAAA	-17	NA	18172636	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18174107_18174226_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18213560_18213759_18215578
ES.18400.147	chr2	+	5211	1	Antisense	novelGene_ENSMUSG00000081619.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACTGTTTGGATTTCA	8426	False	NA	NA	False	NA	NA	NA	18181133	18186344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_18181100_18186300
ES.18400.148	chr2	+	9954	10	ISM	ENSMUSG00000026743.17	ENSMUST00000114669.2	3865	16	53193	-3	9098	1	3prime_fragment	FALSE	canonical	3	221	junction_4	22.2865734922327	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	18184159	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.149	chr2	+	6146	9	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	15149	0	intron_retention	FALSE	canonical	3	234	junction_1	19.2577094951606	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	3423	False	NA	11	True	AATAAA	-15	NA	18190210	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18191208_18201393_18201512_18202735_18202809_18208411_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.15	chr2	+	4969	23	NIC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	-69	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	89.652819806036	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4331	False	NA	13	True	AATAAA	-17	NA	18069135	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069307_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.150	chr2	+	4776	9	ISM	ENSMUSG00000026743.17	ENSMUST00000114669.2	3865	16	68554	0	24459	0	3prime_fragment	FALSE	canonical	3	221	junction_3	21.9260119492807	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	6625	False	NA	10	True	AATAAA	-14	NA	18199520	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.151	chr2	+	2851	7	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	33490	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.183930025986	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	18208551	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18208830_18210798_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.152	chr2	+	4913	4	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	34904	0	intron_retention	FALSE	canonical	3	255	junction_1	14.7044966667418	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	NA	False	NA	12	True	AATAAA	-16	NA	18209965	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18211001_18211361_18211451_18211590_18213759_18215578
ES.18400.16	chr2	+	5091	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-96	9	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	47.2740384433549	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTTCTTTGTTGGA	4546	False	NA	21	True	AATAAA	-25	NA	18069350	18217208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.17	chr2	+	5234	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	83.5048235466405	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4546	False	NA	10	True	AATAAA	-14	NA	18069350	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.18	chr2	+	4667	19	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-83	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	69.4368218038688	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4559	False	NA	14	True	AATAAA	-18	NA	18069363	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.19	chr2	+	5036	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-78	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.6527534178839	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4564	False	NA	13	True	AATAAA	-17	NA	18069368	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131045_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.2	chr2	+	4661	21	NNC	ENSMUSG00000026743.17	novel	3865	16	NA	NA	-7778	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.863485368187	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCCTGCCTTCTTTG	3254	False	NA	16	True	AATAAA	-20	NA	18052269	18217203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18052359_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.20	chr2	+	4989	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-69	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.0879644687219	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCCTGCCTTCTTTG	4573	False	NA	16	True	AATAAA	-20	NA	18069377	18217203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.21	chr2	+	5124	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.0671024926851	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4576	False	NA	11	True	AATAAA	-15	NA	18069380	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087560_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.23	chr2	+	4949	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-58	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	64.8935636498305	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4584	False	NA	13	True	AATAAA	-17	NA	18069388	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.24	chr2	+	4944	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-58	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	58.9791425522476	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4584	False	NA	14	True	AATAAA	-18	NA	18069388	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.25	chr2	+	5071	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-108	-1420	-57	2	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4585	False	NA	14	True	AATAAA	-18	NA	18069389	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.26	chr2	+	4951	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-53	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	71.6515471910833	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4589	False	NA	13	True	AATAAA	-17	NA	18069393	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215565
ES.18400.27	chr2	+	5204	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-52	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	86.8656369854552	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4590	False	NA	14	True	AATAAA	-18	NA	18069394	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18087321_18087537_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.28	chr2	+	4748	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	100.744327389356	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4591	False	NA	11	True	AATAAA	-15	NA	18069395	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18167127_18167698_18175064_18175110_18175853_18175887_18177309_18177435_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.29	chr2	+	4059	20	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-51	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	83.7552826299395	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4591	False	NA	13	True	AATAAA	-17	NA	18069395	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18175064_18175110_18175853_18175887_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.3	chr2	+	2857	1	Antisense	novelGene_ENSMUSG00000054074.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTCTTAAGAAAAACAA	3257	False	NA	NA	False	AAAAAG	-23	NA	18052272	18055129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_18052300_18055100
ES.18400.30	chr2	+	5344	25	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-51	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	89.3457314157885	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATAGCTCTGTGCCCTGCC	4591	False	NA	9	True	AATAAA	-13	NA	18069395	18217196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.31	chr2	+	5199	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-51	2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	73.4679330734345	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4591	False	NA	14	True	AATAAA	-18	NA	18069395	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.32	chr2	+	4984	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	80.3037710955962	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4592	False	NA	11	True	AATAAA	-15	NA	18069396	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.33	chr2	+	4994	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	82.4703647294053	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.34	chr2	+	4942	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	64.0821468269448	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.35	chr2	+	4904	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	77.089623166805	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.36	chr2	+	5164	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	84.9408224039395	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.37	chr2	+	5026	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	86.6588852726263	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4592	False	NA	11	True	AATAAA	-15	NA	18069396	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.38	chr2	+	5052	23	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	81.8522782489617	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.39	chr2	+	4785	21	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	83.0301752376809	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.4	chr2	+	4853	22	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-95	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	58.8851066256394	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	2816	False	NA	12	True	AATAAA	-16	NA	18059952	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.40	chr2	+	4927	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	63.2565234193442	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4592	False	NA	13	True	AATAAA	-17	NA	18069396	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.41	chr2	+	5076	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.5797573283138	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4592	False	NA	11	True	AATAAA	-15	NA	18069396	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114628_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.43	chr2	+	5056	23	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	84.0019185141006	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.44	chr2	+	2770	11	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	1493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.2249960555379	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTGAATACTGC	4592	False	NA	NA	False	AATATA	-17	NA	18069396	18165894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18113987_18114082_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266
ES.18400.45	chr2	+	5115	24	FSM	ENSMUSG00000026743.17	ENSMUST00000114671.8	5063	24	-50	-2	-50	2	multi-exon	FALSE	canonical	3	11	junction_3	74.1776083487481	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.47	chr2	+	4777	20	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	79.4767165681515	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.48	chr2	+	5104	23	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	64.5422534417481	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202693_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.49	chr2	+	4840	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-50	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	73.9688602741007	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4592	False	NA	14	True	AATAAA	-18	NA	18069396	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.5	chr2	+	4978	23	FSM	ENSMUSG00000026743.17	ENSMUST00000028076.15	4917	23	-58	-3	-58	2	multi-exon	FALSE	canonical	2	2	junction_1	60.9982386956127	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	2853	False	NA	14	True	AATAAA	-18	NA	18059989	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18060183_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.50	chr2	+	5184	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.2869427422744	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18096978_18097172_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.51	chr2	+	4982	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-49	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	59.0850112021047	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4593	False	NA	14	True	AATAAA	-18	NA	18069397	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.52	chr2	+	4828	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	77.3001293659978	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4593	False	NA	11	True	AATAAA	-15	NA	18069397	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.53	chr2	+	4824	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-49	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	72.5314850704893	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4593	False	NA	13	True	AATAAA	-17	NA	18069397	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.54	chr2	+	5106	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-49	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	73.7849017091359	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4593	False	NA	14	True	AATAAA	-18	NA	18069397	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.55	chr2	+	4896	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	66.017024319489	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4594	False	NA	13	True	AATAAA	-17	NA	18069398	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.56	chr2	+	5156	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-48	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1808814980049	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4594	False	NA	14	True	AATAAA	-18	NA	18069398	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18113987_18114082_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.57	chr2	+	5028	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	65.9975605953368	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4594	False	NA	13	True	AATAAA	-17	NA	18069398	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.58	chr2	+	4790	19	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	80.7184750984694	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4594	False	NA	12	True	AATAAA	-16	NA	18069398	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.6	chr2	+	4719	21	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	73.819441883558	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	2853	False	NA	11	True	AATAAA	-15	NA	18059989	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.60	chr2	+	5490	26	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.0413539196212	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4595	False	NA	10	True	AATAAA	-14	NA	18069399	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18096978_18097172_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.61	chr2	+	4608	18	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-47	8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	70.4916496073107	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGCCTTCTTTGTTGG	4595	False	NA	20	True	AATAAA	-24	NA	18069399	18217207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.62	chr2	+	5072	23	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-47	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	92.9548455207426	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4595	False	NA	13	True	AATAAA	-17	NA	18069399	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.63	chr2	+	4947	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-47	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	74.5172966498383	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4595	False	NA	14	True	AATAAA	-18	NA	18069399	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.64	chr2	+	5126	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-44	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	74.6655808274633	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4598	False	NA	13	True	AATAAA	-17	NA	18069402	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.65	chr2	+	5395	26	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	95.0193580277198	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4602	False	NA	12	True	AATAAA	-16	NA	18069406	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.67	chr2	+	4524	8	NIC	ENSMUSG00000026743.17	novel	825	7	NA	NA	-38	3398	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	87.699859213812	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGCTTGTGAGACTATG	4604	False	NA	NA	False	NA	NA	NA	18069408	18134438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18114592_18114703_18127055_18127160_18128529_18128624_18130944
ES.18400.68	chr2	+	4803	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	76.2933828854695	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4605	False	NA	13	True	AATAAA	-17	NA	18069409	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211805_18212593_18212691_18213560_18213759_18215578
ES.18400.69	chr2	+	3450	4	NIC	ENSMUSG00000026743.17	novel	651	6	NA	NA	-37	20225	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	71.2242156073964	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGTATGTATGTT	4605	False	NA	NA	False	AATAAA	-19	NA	18069409	18090291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321
ES.18400.7	chr2	+	3982	20	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-49	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	77.4376346334115	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	2862	False	NA	13	True	AATAAA	-17	NA	18059998	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.70	chr2	+	4952	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	65.2748592969439	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4605	False	NA	11	True	AATAAA	-15	NA	18069409	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.71	chr2	+	4846	21	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	82.2362450504642	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4605	False	NA	13	True	AATAAA	-17	NA	18069409	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.72	chr2	+	4964	22	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	74.3217861138742	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4605	False	NA	14	True	AATAAA	-18	NA	18069409	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.73	chr2	+	5012	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.8162983155916	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4607	False	NA	13	True	AATAAA	-17	NA	18069411	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114628_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.74	chr2	+	5157	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.5739045587323	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4608	False	NA	12	True	AATAAA	-16	NA	18069412	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18099763_18099861_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.75	chr2	+	5074	24	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	75.6993356244866	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4614	False	NA	13	True	AATAAA	-17	NA	18069418	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18140422_18140482_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.76	chr2	+	4912	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-28	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	66.491606890254	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4614	False	NA	14	True	AATAAA	-18	NA	18069418	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.77	chr2	+	4864	23	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	91.2251890870441	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4615	False	NA	10	True	AATAAA	-14	NA	18069419	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.78	chr2	+	4284	8	NIC	ENSMUSG00000026743.17	novel	637	7	NA	NA	-27	3355	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	41.7318945221537	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	4615	False	NA	NA	False	NA	NA	NA	18069419	18134395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944
ES.18400.79	chr2	+	5053	23	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	63.4406731384879	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4617	False	NA	12	True	AATAAA	-16	NA	18069421	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202693_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.8	chr2	+	4752	21	NIC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	69.5028596533984	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	2863	False	NA	13	True	AATAAA	-17	NA	18059999	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18060183_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.80	chr2	+	3462	4	ISM	ENSMUSG00000026743.17	ENSMUST00000153279.2	651	6	-221	24411	-23	20225	5prime_fragment	FALSE	canonical	3	26	junction_3	72.0061725749181	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGTATGTATGTT	4619	False	NA	NA	False	AATAAA	-19	NA	18069423	18090291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321
ES.18400.81	chr2	+	4470	17	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	72.7287071502718	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4627	False	NA	10	True	AATAAA	-14	NA	18069431	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.82	chr2	+	6709	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-14	0	intron_retention	FALSE	canonical	3	18	junction_4	62.4720737610014	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4628	False	NA	11	True	AATAAA	-15	NA	18069432	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560
ES.18400.83	chr2	+	5161	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.2208001225598	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4630	False	NA	12	True	AATAAA	-16	NA	18069434	18217199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18113987_18114082_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.84	chr2	+	4967	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	60.4211973436093	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4633	False	NA	13	True	AATAAA	-17	NA	18069437	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.86	chr2	+	5047	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	73.2903437033231	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4633	False	NA	13	True	AATAAA	-17	NA	18069437	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.87	chr2	+	4960	23	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	84.6563788461262	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4636	False	NA	13	True	AATAAA	-17	NA	18069440	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.88	chr2	+	5275	25	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	81.7663401100966	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4646	False	NA	13	True	AATAAA	-17	NA	18069450	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18087321_18087537_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.9	chr2	+	4884	23	NNC	ENSMUSG00000026743.17	novel	4917	23	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.6981864162837	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	2863	False	NA	13	True	AATAAA	-17	NA	18059999	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18060183_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131045_18140422_18140482_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.90	chr2	+	5138	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	84.5236042145713	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4646	False	NA	14	True	AATAAA	-18	NA	18069450	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.91	chr2	+	5194	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	72.910593409874	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4647	False	NA	10	True	AATAAA	-14	NA	18069451	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18087321_18087537_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.92	chr2	+	5022	23	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	84.7263948452374	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4652	False	NA	14	True	AATAAA	-18	NA	18069456	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.94	chr2	+	4802	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	64.7342838069597	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTCTGTGCCCTGCCTT	4660	False	NA	11	True	AATAAA	-15	NA	18069464	18217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.95	chr2	+	4845	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	18	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	75.0685520041515	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4660	False	NA	14	True	AATAAA	-18	NA	18069464	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.96	chr2	+	4885	22	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	64.4802699701196	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGTGCCCTGCCTTCT	4660	False	NA	13	True	AATAAA	-17	NA	18069464	18217200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.97	chr2	+	4827	21	NIC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	18	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	77.6211955589451	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4660	False	NA	14	True	AATAAA	-18	NA	18069464	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.98	chr2	+	5194	25	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.0325664383888	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCCTGCCTTCTT	4660	False	NA	14	True	AATAAA	-18	NA	18069464	18217201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069676_18069845_18070006_18075935_18076016_18096978_18097126_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18400.99	chr2	+	4960	23	NNC	ENSMUSG00000026743.17	novel	3543	23	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	65.0535697878968	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTCTGTGCCCTGCCT	4660	False	NA	10	True	AATAAA	-14	NA	18069464	18217197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210817_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ES.18401.1	chr2	+	1559	1	Intergenic	novelGene_15302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAAAAAGAAAATGCTAA	NA	False	NA	NA	False	NA	NA	NA	18252453	18254012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18252500_18254000
ES.18402.1	chr2	+	1241	1	Intergenic	novelGene_15304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18330228	18331469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18330200_18331500
ES.18403.1	chr2	+	176	1	Intergenic	novelGene_15305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	18341144	18341320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18341100_18341300
ES.18404.1	chr2	+	174	1	Intergenic	novelGene_15307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACTACTTTGAATA	NA	False	NA	NA	False	NA	NA	NA	18349006	18349180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18349000_18349200
ES.18405.1	chr2	-	178	2	Antisense	novelGene_ENSMUSG00000099050.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAAAGGGGGGT	NA	False	NA	NA	False	NA	NA	NA	18093186	18006912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18006922_18093017
ES.18405.10	chr2	-	4466	1	Genic_Genomic	ENSMUSG00000054057.3	novel	NA	NA	NA	NA	-1957	-7255	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCAAAGGCACCAAAGG	6479	False	NA	NA	False	NA	NA	NA	18044505	18040039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_18040000_18044500
ES.18405.11	chr2	-	2554	1	Genic_Genomic	ENSMUSG00000054057.3	novel	NA	NA	NA	NA	-1503	-8713	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGCTTAAAGTATGTG	6933	False	NA	NA	False	AATAAA	-10	NA	18044051	18041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_18041500_18044100
ES.18405.12	chr2	-	2788	2	NNC	ENSMUSG00000054074.10	novel	420	2	NA	NA	569	447	intron_retention	FALSE	canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTATTATGTTGTTTC	3294	False	NA	NA	False	AGTAAA	-19	NA	18052691	18045039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18045853_18050716
ES.18405.13	chr2	-	2793	3	NNC	ENSMUSG00000054074.10	novel	420	2	NA	NA	612	444	intron_retention	FALSE	canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTTATTATGTTGT	3337	False	NA	NA	False	AGTAAA	-16	NA	18052648	18045042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18045853_18049329_18049381_18050716
ES.18405.14	chr2	-	3811	1	ISM	ENSMUSG00000054074.10	ENSMUST00000091420.6	4376	2	1152	6	550	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTGAAGCATAAATC	3275	False	NA	NA	False	ATTAAA	-14	NA	18052710	18048899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_18048900_18052700
ES.18405.15	chr2	-	4229	3	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-687	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTGAAGCATAAATC	1436	False	NA	NA	False	ATTAAA	-14	NA	18054549	18048899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18052253_18052505_18053264_18054431
ES.18405.16	chr2	-	3924	3	NNC	ENSMUSG00000054074.10	novel	4376	2	NA	NA	-16	-252	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	2107	False	NA	0	True	ATTAAA	-18	NA	18053878	18049145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18052225_18052443_18053264_18053853
ES.18405.17	chr2	-	3596	1	ISM	ENSMUSG00000054074.10	ENSMUST00000091420.6	4376	2	1121	252	519	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	3244	False	NA	0	True	ATTAAA	-18	NA	18052741	18049145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_18049100_18052700
ES.18405.18	chr2	-	3261	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-362	41	intron_retention	FALSE	canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAGACCTGAAAGTGTA	1761	False	NA	15	True	AATAAA	-33	NA	18054224	18050022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18053264_18054204
ES.18405.19	chr2	-	1684	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-15416	-429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAATCAAGTCAGTGTA	NA	False	NA	NA	False	TTTAAA	-38	NA	18069278	18053383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18055005_18069215
ES.18405.2	chr2	-	4686	5	NNC	ENSMUSG00000054057.3	novel	363	2	NA	NA	-28	5618	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.54950975679639	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTCCTACTATTATTGT	NA	False	NA	NA	False	NA	NA	NA	18033599	18024385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18024617_18028048_18028201_18028609_18028742_18028956_18033050_18033521
ES.18405.20	chr2	-	1845	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-15088	-429	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGAATCAAGTCAGTGTA	NA	False	NA	NA	False	TTTAAA	-38	NA	18068950	18053383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18055005_18068726
ES.18405.21	chr2	-	1908	2	NNC	ENSMUSG00000054074.10	novel	835	2	NA	NA	-1643	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACGAAAACCAAAAA	480	False	NA	NA	False	NA	NA	NA	18055505	18053423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18055005_18055178
ES.18405.22	chr2	-	1326	3	Antisense	novelGene_ENSMUSG00000099050.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATATACGGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	18069275	18053959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18055005_18068726_18068948_18069215
ES.18405.23	chr2	-	1987	1	Genic_Genomic	ENSMUSG00000086340.2	novel	NA	NA	NA	NA	-612	-1046	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTAGGTTGCGGAGCAC	NA	False	NA	NA	False	NA	NA	NA	18062036	18060049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_18060000_18062000
ES.18405.24	chr2	-	385	1	Genic_Genomic	ENSMUSG00000086340.2	novel	NA	NA	NA	NA	-18	-2054	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGGGTGGTTGCATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	18061442	18061057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_18061100_18061400
ES.18405.25	chr2	-	5182	1	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGCCAGGAATGCTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	18069275	18064093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18064100_18069300
ES.18405.26	chr2	-	4644	1	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAGAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	18069261	18064617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18064600_18069300
ES.18405.27	chr2	-	4526	2	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACACTGACCC	NA	False	NA	NA	False	NA	NA	NA	18088461	18083811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18083990_18084113
ES.18405.28	chr2	-	4906	1	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAACACTG	NA	False	NA	NA	False	NA	NA	NA	18088721	18083815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18083800_18088700
ES.18405.29	chr2	-	174	2	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAAATCAAAATAAAATG	NA	False	NA	NA	False	NA	NA	NA	18093186	18090271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18090279_18093019
ES.18405.3	chr2	-	601	4	Antisense	novelGene_ENSMUSG00000085319.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.29983164553722	67	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATCA	5586	False	NA	NA	False	NA	NA	NA	18045398	18024421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18024617_18028048_18028201_18028609_18028742_18045276
ES.18405.30	chr2	-	2855	1	Intergenic	novelGene_15296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18093939	18091084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18091100_18093900
ES.18405.31	chr2	-	201	1	Intergenic	novelGene_15297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTTTAAATATTT	NA	False	NA	NA	False	NA	NA	NA	18093186	18092985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18093000_18093200
ES.18405.32	chr2	-	644	2	Intergenic	novelGene_15298	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	18139404	18093009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18093090_18138840
ES.18405.33	chr2	-	146	1	Intergenic	novelGene_15300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	18124377	18124231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18124200_18124400
ES.18405.34	chr2	-	181	1	Intergenic	novelGene_15301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	18126702	18126521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18126500_18126700
ES.18405.4	chr2	-	3659	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	45	206	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATTCCATAAGGATAG	NA	False	NA	NA	False	ATTAAA	-16	NA	18033637	18029797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18033050_18033230
ES.18405.5	chr2	-	3701	1	Genic_Genomic	ENSMUSG00000054057.3	novel	NA	NA	NA	NA	1	23	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATATCTTTGCAACTA	NA	False	NA	0	True	AATAAA	-19	NA	18033681	18029980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_18030000_18033700
ES.18405.6	chr2	-	3463	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	41	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTACTTTGCTCTGAAT	NA	False	NA	-17	True	AATAAA	-2	NA	18033641	18029997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18033050_18033230
ES.18405.7	chr2	-	3166	2	FSM	ENSMUSG00000054057.3	ENSMUST00000135980.2	363	2	-64	-2739	47	6	multi-exon	FALSE	canonical	2	4	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTACTTTGCTCTGAAT	NA	False	NA	-17	True	AATAAA	-2	NA	18033635	18029997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18033050_18033521
ES.18405.8	chr2	-	3208	2	NNC	ENSMUSG00000054057.3	novel	3217	2	NA	NA	3	-176	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGCGTTTGTGACC	NA	False	NA	NA	False	AATAAA	-19	NA	18033568	18030179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18033050_18033230
ES.18405.9	chr2	-	3020	2	FSM	ENSMUSG00000054057.3	ENSMUST00000151857.2	426	2	10	-2604	10	-177	multi-exon	FALSE	canonical	2	4	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTCAGCGTTTGTGAC	NA	False	NA	NA	False	AATAAA	-18	NA	18033672	18030180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18033050_18033521
ES.18406.1	chr2	-	6245	1	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAATGTTTGATGGG	NA	False	NA	NA	False	NA	NA	NA	18156406	18150161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18150200_18156400
ES.18407.1	chr2	-	6375	1	FSM	ENSMUSG00000081619.2	ENSMUST00000118087.2	414	1	386	-6347	386	6347	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAATTCTGAGTGACCTA	NA	False	NA	NA	False	AATGAA	-39	NA	18183867	18177492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18177500_18183900
ES.18407.2	chr2	-	9836	1	FSM	ENSMUSG00000081619.2	ENSMUST00000118087.2	414	1	-6066	-3356	-6066	3356	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAGGGTAAATCTTGAT	NA	False	NA	NA	False	NA	NA	NA	18190319	18180483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18180500_18190300
ES.18408.1	chr2	-	310	1	Antisense	novelGene_ENSMUSG00000026743.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18191658	18191348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_18191300_18191700
ES.18409.1	chr2	-	4887	13	FSM	ENSMUSG00000026740.13	ENSMUST00000091418.12	5070	13	177	6	8	-6	multi-exon	FALSE	canonical	1	1	junction_1	17.4712064710928	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATCCTCTGAAGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	18397445	18211149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18214232_18222055_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.10	chr2	-	2707	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	91	2699	72	687	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGCTGTTTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	18397550	18221258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.11	chr2	-	2513	12	NNC	ENSMUSG00000026740.13	novel	5497	12	NA	NA	22	462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.4462587754243	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTTGTTCTTCAGTT	NA	False	NA	3	True	TTTAAA	-35	NA	18397600	18221483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236616_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.12	chr2	-	2586	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	-16	2927	-16	459	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTTGGGCTTGTTCTTCA	NA	False	NA	0	True	TTTAAA	-32	NA	18397657	18221486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.15	chr2	-	2321	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	72	3104	53	282	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCCAGTCTGCACTC	NA	False	NA	NA	False	NA	NA	NA	18397569	18221663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.16	chr2	-	2128	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	9	3360	3	26	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGGGGGGGGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	18397632	18221919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.17	chr2	-	1508	11	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	273	5841	85	-59	5prime_fragment	FALSE	canonical	3	39	junction_4	9.17660067781093	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGAACTCGTGCTG	NA	False	NA	NA	False	NA	NA	NA	18397368	18224400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.18	chr2	-	175	1	Intergenic	novelGene_15303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAATTAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	18265878	18265703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18265700_18265900
ES.18409.19	chr2	-	4448	9	NNC	ENSMUSG00000026740.13	novel	1001	3	NA	NA	55	35193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGACCAGATGGGATT	NA	False	NA	NA	False	NA	NA	NA	18397567	18276255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18279476_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.2	chr2	-	2089	13	FSM	ENSMUSG00000026740.13	ENSMUST00000091418.12	5070	13	98	2883	-71	13	multi-exon	FALSE	canonical	1	1	junction_1	17.4712064710928	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAATCTGT	NA	False	NA	NA	False	TTTAAA	-6	NA	18397524	18214026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18214232_18222055_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.20	chr2	-	1211	7	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	-3	80135	-3	12754	5prime_fragment	FALSE	canonical	3	55	junction_5	4.48763733927875	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGAATTTTCTGTGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	18397644	18298694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.21	chr2	-	175	1	Intergenic	novelGene_15306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATTTTTTTTCTGG	6072	False	NA	NA	False	NA	NA	NA	18342896	18342721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18342700_18342900
ES.18409.3	chr2	-	9988	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	40	-4531	21	11	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAACCAATCT	NA	False	NA	NA	False	TTTAAA	-4	NA	18397601	18214028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.4	chr2	-	4641	13	NNC	ENSMUSG00000026740.13	novel	5497	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7129895839184	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTATGTATAATATT	NA	False	NA	NA	False	AATAAA	-21	NA	18397631	18218559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18219405_18220250_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.5	chr2	-	5488	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	9	0	3	0	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTATGTATAATATT	NA	False	NA	NA	False	AATAAA	-21	NA	18397632	18218559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.6	chr2	-	4638	13	NNC	ENSMUSG00000026740.13	novel	5497	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7129895839184	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTATGTATAATATT	NA	False	NA	NA	False	AATAAA	-21	NA	18397621	18218559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18219417_18220255_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.7	chr2	-	4637	13	NNC	ENSMUSG00000026740.13	novel	5497	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7129895839184	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGTGTATGTATAA	NA	False	NA	NA	False	AATAAA	-17	NA	18397621	18218563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18219425_18220260_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ES.18409.8	chr2	-	1644	2	NNC	ENSMUSG00000026740.13	novel	5497	12	NA	NA	669	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGTGTATGTATAA	NA	False	NA	NA	False	AATAAA	-17	NA	18221044	18218563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18219432_18220268
ES.1841.1	chr1	+	3457	3	NIC	ENSMUSG00000070532.6	novel	1731	4	NA	NA	-1028	23	intron_retention	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAGTTGCGAACCTG	NA	False	NA	NA	False	AATAAA	-45	NA	169755188	169762005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_169757730_169760563_169760685_169761210
ES.18410.1	chr2	+	200	1	Intergenic	novelGene_15308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCCTTTCACTGGACA	NA	False	NA	28	True	NA	NA	NA	18417403	18417603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18417400_18417600
ES.18411.1	chr2	+	1544	2	Intergenic	novelGene_15309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACCCGTTCTCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	18473855	18476754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18474815_18476169
ES.18412.1	chr2	-	160	1	Intergenic	novelGene_15310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATAGTGATTTAATT	NA	False	NA	NA	False	NA	NA	NA	18500436	18500276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18500300_18500400
ES.18413.1	chr2	+	210	1	Intergenic	novelGene_15311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACCTTACATTTCATA	NA	False	NA	NA	False	NA	NA	NA	18661537	18661747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18661500_18661700
ES.18414.1	chr2	+	1134	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	-200	1	-161	0	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTGGAGTTTGTGT	6	True	NA	36	True	AATAAA	-30	NA	18677033	18681041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ES.18414.10	chr2	+	2724	4	FSM	ENSMUSG00000051154.12	ENSMUST00000130537.8	544	4	-1885	-295	26	-12	multi-exon	FALSE	canonical	3	404	junction_2	14.522013940528	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	99	False	NA	24	True	AATAAA	-18	NA	18677272	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18679528_18679619_18679677_18679760_18679821_18680677
ES.18414.11	chr2	+	2690	4	NIC	ENSMUSG00000051154.12	novel	431	7	NA	NA	26	-12	intron_retention	FALSE	canonical	3	388	junction_1	22.0151463012778	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	99	False	NA	24	True	AATAAA	-18	NA	18677272	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679528_18679619_18679821_18680677
ES.18414.12	chr2	+	2510	5	NIC	ENSMUSG00000051154.12	novel	431	7	NA	NA	35	-12	intron_retention	FALSE	canonical	3	388	junction_1	20.1416856295594	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	195	False	NA	24	True	AATAAA	-18	NA	18677368	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679528_18679619_18679677_18679760_18679821_18680677
ES.18414.2	chr2	+	3415	5	NIC	ENSMUSG00000051154.12	novel	935	8	NA	NA	0	-7	intron_retention	FALSE	canonical	3	388	junction_1	23.0908531674341	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGCATTCTGTTTGGAG	60	False	NA	29	True	AATAAA	-23	NA	18677233	18681034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679000_18679091_18679528_18679619_18679677_18679760
ES.18414.3	chr2	+	1778	7	ISM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	1	13	1	-12	intron_retention	FALSE	canonical	3	388	junction_2	23.5843639350783	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	61	False	NA	24	True	AATAAA	-18	NA	18677234	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760
ES.18414.4	chr2	+	3798	1	NIC	ENSMUSG00000051154.12	novel	938	9	NA	NA	1	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCGGCATTCTGTTTGG	61	False	NA	27	True	AATAAA	-21	NA	18677234	18681032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18677200_18681000
ES.18414.5	chr2	+	1353	6	NIC	ENSMUSG00000051154.12	novel	935	8	NA	NA	1	-12	intron_retention	FALSE	canonical	3	388	junction_2	19.7524682002022	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	61	False	NA	24	True	AATAAA	-18	NA	18677234	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18677415_18678705_18678818_18678935_18679528_18679619_18679677_18679760_18679821_18680677
ES.18414.6	chr2	+	3593	3	NIC	ENSMUSG00000051154.12	novel	938	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	388	junction_1	22	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTGGAGTTTGTGT	65	False	NA	36	True	AATAAA	-30	NA	18677238	18681041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679528_18679619
ES.18414.7	chr2	+	3617	3	FSM	ENSMUSG00000051154.12	ENSMUST00000151230.2	677	3	-2221	-719	5	-10	multi-exon	FALSE	canonical	3	404	junction_2	14	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCGGCATTCTGTTTG	65	False	NA	26	True	AATAAA	-20	NA	18677238	18681031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18679528_18679619_18679677_18679760
ES.18414.8	chr2	+	2545	6	NIC	ENSMUSG00000051154.12	novel	431	7	NA	NA	-1	-11	intron_retention	FALSE	canonical	3	388	junction_1	22.0417785126337	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGCGGCATTCTGTTT	69	False	NA	25	True	AATAAA	-19	NA	18677242	18681030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679000_18679091_18679528_18679619_18679677_18679760_18679821_18680677
ES.18414.9	chr2	+	2203	7	NIC	ENSMUSG00000051154.12	novel	935	8	NA	NA	0	-12	intron_retention	FALSE	canonical	3	388	junction_1	21.7842960766593	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCGGCATTCTGTT	70	False	NA	24	True	AATAAA	-18	NA	18677243	18681029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ES.18415.1	chr2	+	3803	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-202	-7	-202	7	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTCTTAAATGACGA	4453	False	NA	17	True	AATAAA	-22	NA	18681626	18691447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.10	chr2	+	3045	9	NIC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-120	6	intron_retention	FALSE	canonical	3	69	junction_7	5.62222153601225	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGCTCTTTAATTAAA	4797	False	NA	7	True	AATAAA	-20	NA	18681970	18690947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.12	chr2	+	2639	9	NNC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-79	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	25.8961266408704	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTTAACTTCTGC	4838	False	NA	4	True	ATTAAA	-16	NA	18682011	18690755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688227_18688791_18688878_18688962
ES.18415.13	chr2	+	1977	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	187	1430	-75	-931	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTGTGTTTCATGCA	4842	False	NA	NA	False	TATAAA	-8	NA	18682015	18690010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.14	chr2	+	3628	9	NIC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-75	-1	intron_retention	FALSE	canonical	3	70	junction_8	5.30182751511212	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCGTGGTTTGCTTCTTA	4842	False	NA	9	True	AATAAA	-14	NA	18682015	18691439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688878_18688962
ES.18415.15	chr2	+	3891	9	NIC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-40	0	intron_retention	FALSE	canonical	3	69	junction_7	5.93585503529188	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4877	False	NA	10	True	AATAAA	-15	NA	18682050	18691440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18682281_18686603_18686735_18687033_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.16	chr2	+	3297	9	NIC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	57	2	intron_retention	FALSE	canonical	3	69	junction_7	5.93585503529188	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTATGCTCTTTAAT	4974	False	NA	3	True	AATAAA	-16	NA	18682147	18690943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18682281_18686603_18686735_18687033_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.17	chr2	+	3347	9	ISM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	330	2	68	-2	intron_retention	FALSE	canonical	3	69	junction_8	5.47722557505166	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATCGTGGTTTGCTTCTT	4985	False	NA	8	True	AATAAA	-13	NA	18682158	18691438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796
ES.18415.2	chr2	+	3263	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-162	493	-162	6	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGCTCTTTAATTAAA	4493	False	NA	7	True	AATAAA	-20	NA	18681666	18690947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.3	chr2	+	3425	11	NNC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-151	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.478500803927	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAACAGAAAGATG	4504	False	NA	-10	True	NA	NA	NA	18681677	18691420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18681771_18682070_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.4	chr2	+	3040	10	NNC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-104	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.7436236954139	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCCACAAGATACATATAT	4551	False	NA	57	True	AGTAAA	-13	NA	18681724	18690808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688988
ES.18415.6	chr2	+	2984	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	-72	682	-72	-183	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTAACTTCTGCTTT	4583	False	NA	7	True	ATTAAA	-19	NA	18681756	18690758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.7	chr2	+	3992	10	NIC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	24	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4619	False	NA	10	True	AATAAA	-15	NA	18681792	18691440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_18682643_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ES.18415.8	chr2	+	3012	9	NNC	ENSMUSG00000026739.14	novel	3594	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	25.8961266408704	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATGCTCTTTAATTA	4655	False	NA	5	True	AATAAA	-18	NA	18681828	18690945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688227_18688791_18688878_18688962
ES.18415.9	chr2	+	3156	9	ISM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	32	491	32	8	intron_retention	FALSE	canonical	3	69	junction_8	5.47722557505166	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGCTCTTTAATTAAAAT	4687	False	NA	9	True	AATAAA	-22	NA	18681860	18690949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796
ES.18416.1	chr2	-	163	1	Intergenic	novelGene_15312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGATTCTGTATAAG	NA	False	NA	NA	False	AATAAA	-19	NA	18741237	18741074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_18741100_18741200
ES.18417.1	chr2	+	183	1	Intergenic	novelGene_15313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTTTTACAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	18881528	18881711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18881500_18881700
ES.18418.1	chr2	+	179	1	Intergenic	novelGene_15314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGTACTCATAC	NA	False	NA	NA	False	NA	NA	NA	18969329	18969508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_18969300_18969500
ES.18419.1	chr2	-	3650	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-174	1	-174	-1	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTCTCTGTGCTG	NA	False	NA	-1	True	AATAAA	-20	NA	19003111	18847066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.10	chr2	-	2578	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-45	-752	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	42.0432236283236	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGCATCAATTATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	19002982	18847817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18877094_18877242_18911039_18911137_18912865_18912964_19002662
ES.18419.11	chr2	-	2897	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-172	752	-172	-752	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGCATCAATTATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	19003109	18847817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.12	chr2	-	2896	10	NNC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-97	-752	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	33.8486099428282	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGCATCAATTATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	19003034	18847817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911211_18912865_18912964_19002662
ES.18419.13	chr2	-	2660	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-121	-752	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	32.7008706118891	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGCATCAATTATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	19003058	18847817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.14	chr2	-	2833	10	NNC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-144	-774	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.6584148303049	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	19003081	18847839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894002_18911039_18911137_18912865_18912964_19002662
ES.18419.15	chr2	-	5360	2	ISM	ENSMUSG00000026737.13	ENSMUST00000148583.8	317	4	16318	-1342	16318	-774	3prime_fragment	FALSE	canonical	3	114	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	18854613	18847839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_18849272_18850685
ES.18419.16	chr2	-	2729	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-173	-774	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	29.756301853557	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	19003110	18847839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.17	chr2	-	2475	7	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-120	-774	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	40.2906109823782	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	19003057	18847839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_19002662
ES.18419.18	chr2	-	2825	11	NNC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-107	-848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.431389066745	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAACTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	19003044	18847913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18909553_18909643_18911039_18911137_18912865_18912964_19002662
ES.18419.19	chr2	-	8658	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-140	-848	intron_retention	FALSE	canonical	0	0	junction_2	37.7580914426002	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAACTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	19003077	18847913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18857623_18857738_18870922_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.2	chr2	-	3431	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-141	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	32.7008706118891	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTCTCTGTGCTG	NA	False	NA	-1	True	AATAAA	-20	NA	19003078	18847066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.20	chr2	-	2273	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-159	1363	-159	753	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGAGCCCATCACTG	NA	False	NA	NA	False	NA	NA	NA	19003096	18848428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.21	chr2	-	1822	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-84	524	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	29.756301853557	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTTACACTTCTGGC	NA	False	NA	NA	False	AAGAAA	-13	NA	19003021	18848657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.22	chr2	-	2024	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-142	1595	-142	521	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAAATGTTACACTTCT	NA	False	NA	NA	False	AAGAAA	-10	NA	19003079	18848660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.3	chr2	-	3475	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-147	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	29.756301853557	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGGCTTCTCTGTGCT	NA	False	NA	-2	True	AATAAA	-19	NA	19003084	18847067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ES.18419.4	chr2	-	3331	1	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	20533	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGGCTTCTCTGTGCT	NA	False	NA	-2	True	AATAAA	-19	NA	18850398	18847067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18847100_18850400
ES.18419.5	chr2	-	3849	12	NNC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-162	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	45.5930616731019	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTTTGGCTTCTCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	19003099	18847070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18909553_18909643_18910085_18910212_18911039_18911137_18912865_18912964_19002662
ES.18419.6	chr2	-	3257	7	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-124	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	37.6164857476081	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTTTGGCTTCTCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	19003061	18847070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18911039_18911137_18912865_18912964_19002662
ES.18419.7	chr2	-	3476	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-159	-7	combination_of_known_splicesites	FALSE	canonical	1	8	junction_6	32.4075608461976	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTTTGGCTTCTCT	NA	False	NA	-7	True	AATAAA	-14	NA	19003096	18847072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18911039_18911137_18912865_18912964_19002662
ES.18419.8	chr2	-	3390	11	NNC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-93	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.3845642243338	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTTTGGCTTCTCT	NA	False	NA	-7	True	AATAAA	-14	NA	19003030	18847072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662_19002766_19002938
ES.18419.9	chr2	-	2712	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-140	-752	combination_of_known_splicesites	FALSE	canonical	1	8	junction_6	32.4075608461976	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGCATCAATTATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	19003077	18847817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18911039_18911137_18912865_18912964_19002662
ES.1842.1	chr1	-	4700	9	FSM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	-5	-83	-5	83	multi-exon	TRUE	canonical	3	45	junction_1	8.48528137423857	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGCGTTTACTGAGAC	NA	False	NA	82	True	TATAAA	-43	NA	169796815	169777020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ES.1842.3	chr1	-	3895	1	NIC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	12294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGACTCAGTTAATTT	NA	False	NA	-1	True	AATAAA	-18	NA	169780998	169777103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169777100_169781000
ES.1842.4	chr1	-	4665	9	NNC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	-94	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.0592242610659	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTAGACTCAGTT	NA	False	NA	-6	True	AATAAA	-13	NA	169796904	169777108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791995_169792075_169793255_169793349_169794798_169795003_169796666
ES.1842.5	chr1	-	4557	8	NIC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	22.7093435773535	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTTTTAGACTCAGT	NA	False	NA	-7	True	AATAAA	-12	NA	169796818	169777109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169780704_169783503_169783603_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ES.1842.6	chr1	-	4441	8	NIC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	50	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	23.566666185569	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTTTTAGACTCAGT	NA	False	NA	-7	True	AATAAA	-12	NA	169796760	169777109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169793255_169793349_169794798_169795003_169796666
ES.1842.7	chr1	-	4402	9	FSM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	19	191	19	-191	multi-exon	FALSE	canonical	3	45	junction_1	8.48528137423857	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGTGCTCATTTCTC	NA	False	NA	NA	False	AATAAA	-37	NA	169796791	169777294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ES.1842.8	chr1	-	4325	8	NIC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	28	-202	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	22.7093435773535	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATCTAACACTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	169796782	169777305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169780704_169783503_169783603_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ES.1842.9	chr1	-	4598	7	NIC	ENSMUSG00000026675.13	novel	1446	8	NA	NA	39	0	intron_retention	FALSE	canonical	3	56	junction_4	6.52346193026031	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTCTCTGTGATCTT	NA	False	NA	NA	False	AATAAA	-24	NA	169796771	169783069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169783603_169786991_169787049_169787255_169787361_169788573_169792075_169793255_169793349_169794798_169795003_169796666
ES.18420.1	chr2	-	201	1	Antisense	novelGene_ENSMUSG00000037683.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGACACAG	NA	False	NA	NA	False	NA	NA	NA	19258858	19258657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_19258700_19258900
ES.18421.1	chr2	+	183	1	Intergenic	novelGene_15315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTTAAAAC	7533	False	NA	NA	False	NA	NA	NA	19308121	19308304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_19308100_19308300
ES.18422.1	chr2	+	1280	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	-23	-61	-23	61	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAATAAATAAAAA	4761	False	NA	80	True	NA	NA	NA	19376423	19399848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
ES.18422.2	chr2	+	6525	4	NNC	ENSMUSG00000023094.15	novel	1196	5	NA	NA	10	-2892	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	64.1110148275803	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGCTTTAGATTCATT	4794	False	NA	NA	False	AGTAAA	-36	NA	19376456	19395239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_19376591_19382972_19383074_19388051_19388129_19389026
ES.18422.3	chr2	+	1094	4	NNC	ENSMUSG00000023094.15	novel	249	3	NA	NA	9520	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74.6904723955249	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTTTGTCTCAGTC	4810	False	NA	16	True	AATAAA	-17	NA	19386171	19399784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_19386318_19388051_19388129_19398018_19398167_19399061
ES.18422.4	chr2	+	947	2	ISM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	21497	2	21292	-2	3prime_fragment	FALSE	canonical	3	173	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTCTCAGTCT	8892	False	NA	17	True	AATAAA	-18	NA	19397943	19399785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_19398167_19399061
ES.18423.1	chr2	-	3643	1	Antisense	novelGene_ENSMUSG00000023094.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2355	False	NA	NA	False	NA	NA	NA	19386584	19382941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_19382900_19386600
ES.18424.1	chr2	+	173	1	Intergenic	novelGene_15316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTGAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	19410981	19411154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_19411000_19411200
ES.18425.1	chr2	+	179	1	Intergenic	novelGene_15317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCTCAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	19444199	19444378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_19444200_19444400
ES.18426.1	chr2	-	249	1	Intergenic	novelGene_15318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACATAAATATGTGTTT	5958	False	NA	NA	False	NA	NA	NA	19541343	19541094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_19541100_19541300
ES.18427.1	chr2	+	2907	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-69	-6	-69	6	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGAGTGGTTTTTAA	2431	False	NA	10	True	AATAAA	-21	NA	19662493	19665400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_19662500_19665400
ES.18427.2	chr2	+	3573	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	-47	-694	-47	694	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTTTCAAGTGTTTT	2453	False	NA	NA	False	NA	NA	NA	19662515	19666088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_19662500_19666100
ES.18428.1	chr2	+	180	1	Intergenic	novelGene_15319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTAGGTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	20162152	20162332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20162200_20162300
ES.18429.1	chr2	-	6602	2	Antisense	novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGTG	NA	False	NA	NA	False	NA	NA	NA	20392684	20386007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_20389933_20390007
ES.18429.2	chr2	-	6002	1	Intergenic	novelGene_15320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGTG	NA	False	NA	NA	False	NA	NA	NA	20392009	20386007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20386000_20392000
ES.1843.1	chr1	-	5684	1	NIC	ENSMUSG00000026674.10	novel	8590	18	NA	NA	110953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCTTCTTTCTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	169805560	169799876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169799900_169805600
ES.1843.2	chr1	-	5187	14	ISM	ENSMUSG00000026674.10	ENSMUST00000170800.8	8289	17	83664	2716	83664	-2716	3prime_fragment	FALSE	canonical	0	0	junction_7	3.11704609066997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAGTAGTGTTTTTT	NA	False	NA	NA	False	AATACA	-19	NA	169832849	169802592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641
ES.1843.3	chr1	-	4329	18	FSM	ENSMUSG00000026674.10	ENSMUST00000194690.6	8590	18	24	4237	24	1260	multi-exon	FALSE	canonical	0	0	junction_7	3.16008847495607	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTACTGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	169938106	169804112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641_169832874_169834330_169834434_169863481_169863591_169916363_169916514_169937830
ES.1843.4	chr1	-	3265	18	NIC	ENSMUSG00000026674.10	novel	8590	18	NA	NA	-54	277	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	3.09592879222136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGTGCAGATCCTAC	NA	False	NA	NA	False	TATAAA	-16	NA	169938385	169805095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641_169832874_169834330_169834434_169863481_169863591_169916363_169916514_169938190
ES.1843.5	chr1	-	218	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAATACAGGCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	169933881	169933663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_169933700_169933900
ES.18430.1	chr2	-	4788	1	Genic_Genomic	ENSMUSG00000085477.8	novel	NA	NA	NA	NA	1280	-6297	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	20436465	20431677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_20431700_20436500
ES.18431.1	chr2	+	184	1	Intergenic	novelGene_15321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGATTTTTGAGAG	NA	False	NA	NA	False	NA	NA	NA	20462720	20462904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20462700_20462900
ES.18432.1	chr2	+	175	1	Intergenic	novelGene_15322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATCATCACT	NA	False	NA	NA	False	NA	NA	NA	20496513	20496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20496500_20496700
ES.18433.1	chr2	+	3204	13	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.78617667873	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTGTTGTTT	NA	False	NA	29	True	AATATA	-30	NA	20514801	20790513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20514906_20523279_20523440_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.10	chr2	+	7155	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-196	12	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTCACTATAACGTCT	4600	False	NA	23	True	AATAAA	-30	NA	20524405	20815177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.100	chr2	+	6299	16	NIC	ENSMUSG00000036617.18	novel	3055	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	61.4565429117736	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	2885	False	NA	22	True	AATAAA	-14	NA	20727439	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20727535_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.101	chr2	+	4773	14	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	1920	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.6660990716657	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCCGTCTGGACTTCC	4801	False	NA	19	True	AATAAA	-11	NA	20729355	20815332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749116_20771294_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812063_20812180_20812712_20812836_20813520
ES.18433.102	chr2	+	6400	16	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	1931	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	61.4565429117736	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4812	False	NA	20	True	AATAAA	-12	NA	20729366	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.103	chr2	+	4706	14	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	1951	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.0528572232308	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4832	False	NA	20	True	AATAAA	-12	NA	20729386	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749103_20765025_20765076_20771255_20771423_20782833_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.104	chr2	+	2904	7	NNC	ENSMUSG00000036617.18	novel	2863	8	NA	NA	2024	769	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	95.0556854340304	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4905	False	NA	NA	False	NA	NA	NA	20729459	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20786608_20786757_20789854
ES.18433.105	chr2	+	6229	16	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	2068	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	78.0801867028733	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4949	False	NA	22	True	AATAAA	-14	NA	20729503	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.106	chr2	+	2973	8	NNC	ENSMUSG00000036617.18	novel	2863	8	NA	NA	2086	769	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	70.2351734662679	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4967	False	NA	NA	False	NA	NA	NA	20729521	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20729565_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.107	chr2	+	5474	14	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-705	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	63.2017526533999	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4084	False	NA	22	True	AATAAA	-14	NA	20741419	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.108	chr2	+	2119	2	ISM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	-606	65625	-606	-87	5prime_fragment	FALSE	canonical	3	8	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATATTGGATGGTTGGGT	4183	False	NA	NA	False	NA	NA	NA	20741518	20749540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20742367_20748269
ES.18433.109	chr2	+	4645	14	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-71	8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	74.9873362089625	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACCTTGTCACTATAAC	4718	False	NA	19	True	AATAAA	-26	NA	20742053	20815173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.11	chr2	+	6916	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-191	-222	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGAGTAGTTTTCCCAC	4605	False	NA	NA	False	AATAAA	-25	NA	20524410	20814943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.110	chr2	+	2996	9	NIC	ENSMUSG00000036617.18	novel	5284	13	NA	NA	-41	3512	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	82.0514320411289	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAGCTACCACCATGA	4748	False	NA	4	True	ATTAAA	-16	NA	20742083	20794022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238
ES.18433.111	chr2	+	6314	16	FSM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	-39	360	-39	-1	multi-exon	FALSE	canonical	3	8	junction_1	61.1139554893607	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4750	False	NA	10	True	AATAAA	-17	NA	20742085	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.112	chr2	+	6880	14	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-29	-3	intron_retention	FALSE	canonical	2	6	junction_11	74.2837196559055	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCCGTCTGGACTTCC	4760	False	NA	19	True	AATAAA	-11	NA	20742095	20815332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812836_20813520
ES.18433.113	chr2	+	6473	16	FSM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	-27	189	-27	0	multi-exon	FALSE	canonical	3	8	junction_1	61.1139554893607	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4762	False	NA	22	True	AATAAA	-14	NA	20742097	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.114	chr2	+	4618	14	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	63.2017526533999	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4769	False	NA	10	True	AATAAA	-17	NA	20742104	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.115	chr2	+	4652	14	NNC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.625655210575	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4771	False	NA	22	True	AATAAA	-14	NA	20742106	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786611_20786757_20789854_20790183_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.117	chr2	+	3212	9	NNC	ENSMUSG00000036617.18	novel	5284	13	NA	NA	159	769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.2294407284687	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4948	False	NA	NA	False	NA	NA	NA	20742283	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20742367_20748269_20749103_20765025_20765076_20765733_20765933_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.118	chr2	+	4664	15	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	178	2478	178	45	5prime_fragment	FALSE	canonical	3	8	junction_1	60.8528251318754	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGATTTTAACTGT	4967	False	NA	NA	False	AATAAA	-16	NA	20742302	20813046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712
ES.18433.119	chr2	+	4069	13	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	178	-232	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	74.3536967623145	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACAGCACATAGAGTA	4967	False	NA	NA	False	AATAAA	-15	NA	20742302	20814933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.12	chr2	+	3261	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9560	24822	-184	3	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTGTTGTTT	4612	False	NA	29	True	AATATA	-30	NA	20524417	20790513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.120	chr2	+	2291	9	NIC	ENSMUSG00000036617.18	novel	5284	13	NA	NA	218	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	95.2549211327163	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTGGGGTTTTGTTGT	5007	False	NA	27	True	AATATA	-28	NA	20742342	20790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20742367_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.121	chr2	+	4361	16	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	6504	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	79.314955854632	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTTTTGTACCTT	NA	False	NA	8	True	AATAAA	-15	NA	20748628	20815162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812712_20812836_20813520
ES.18433.122	chr2	+	1743	1	Intergenic	novelGene_15330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGCTGCTGGTAGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	20751907	20753650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20751900_20753600
ES.18433.123	chr2	+	6316	1	NIC	ENSMUSG00000036617.18	novel	7413	22	NA	NA	16045	14858	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGCCATACAGTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20758169	20764485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20758200_20764500
ES.18433.124	chr2	+	6742	11	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	25380	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.4333105257129	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGACAGCACATAGAG	1657	False	NA	NA	False	AATAAA	-13	NA	20767504	20814931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20771163_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802690_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.125	chr2	+	3646	11	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	256396	0	29129	0	3prime_fragment	FALSE	canonical	3	69	junction_9	45.9090405040227	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	5406	False	NA	22	True	AATAAA	-14	NA	20771253	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.126	chr2	+	4751	12	NNC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	29172	221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.6951896114704	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCAAAATACTATCTGT	5449	False	NA	NA	False	TATAAA	-3	NA	20771296	20814917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812700_20812836_20813520
ES.18433.127	chr2	+	5547	13	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-21656	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0337290722613	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	NA	False	NA	20	True	AATAAA	-12	NA	20781826	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20782222_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.128	chr2	+	3061	10	NNC	ENSMUSG00000036617.18	novel	5898	19	NA	NA	-17645	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.369586476462	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGTCACTATAACGTCT	NA	False	NA	23	True	AATAAA	-30	NA	20785837	20815177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810211_20810248_20812712_20812836_20813520
ES.18433.129	chr2	+	3217	1	NIC	ENSMUSG00000036617.18	novel	7413	22	NA	NA	-15420	769	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	20788062	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20788100_20791300
ES.18433.13	chr2	+	5455	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9560	169	-184	1	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGTACCTTGTCA	4612	False	NA	12	True	AATAAA	-19	NA	20524417	20815166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.130	chr2	+	3891	8	NNC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-13551	0	intron_retention	FALSE	canonical	3	10	junction_7	67.5017762426913	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20789931	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812712
ES.18433.131	chr2	+	11891	6	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-13442	0	intron_retention	FALSE	canonical	3	104	junction_4	48.054136138318	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20790040	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20793423_20802687_20802843_20803426_20803595_20806352_20810474_20810585_20812836_20813520
ES.18433.132	chr2	+	4244	8	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	51112	189	-10246	0	3prime_fragment	FALSE	canonical	3	91	junction_4	55.2678081006014	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20793236	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.134	chr2	+	2635	1	Intergenic	novelGene_15332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATACAAGGACGGAAACCA	NA	False	NA	NA	False	NA	NA	NA	20794294	20796929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20794300_20796900
ES.18433.135	chr2	+	2305	5	NNC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	89.9704812702477	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	6640	False	NA	20	True	AATAAA	-12	NA	20803486	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20803595_20810395_20810474_20810585_20810769_20812712_20812836_20813520
ES.18433.136	chr2	+	3737	5	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	64226	189	2868	0	3prime_fragment	FALSE	canonical	3	91	junction_1	55.1497960105022	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	9504	False	NA	22	True	AATAAA	-14	NA	20806350	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.137	chr2	+	6831	4	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	64884	360	3526	-1	3prime_fragment	FALSE	canonical	3	104	junction_1	57.5171472017017	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	NA	False	NA	10	True	AATAAA	-17	NA	20807008	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.138	chr2	+	3500	2	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	65268	4520	3910	-1997	internal_fragment	FALSE	canonical	3	104	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGACAGGTTATGGCCAAG	NA	False	NA	NA	False	AAAACA	-18	NA	20807392	20811004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20810474_20810585
ES.18433.139	chr2	+	6799	3	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	4085	-2	intron_retention	FALSE	canonical	3	104	junction_1	61.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTTTGTACCTTG	NA	False	NA	9	True	AATAAA	-16	NA	20807567	20815163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20810474_20810585_20812836_20813520
ES.18433.14	chr2	+	5809	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9560	-185	-184	-4	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGGGTTAAGGTTTTT	4612	False	NA	NA	False	AATAAA	-17	NA	20524417	20815520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.140	chr2	+	5974	2	FSM	ENSMUSG00000036617.18	ENSMUST00000156587.2	2386	2	-3588	0	-3588	0	multi-exon	FALSE	canonical	3	227	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20808676	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20812836_20813520
ES.18433.141	chr2	+	4243	4	ISM	ENSMUSG00000036617.18	ENSMUST00000114608.3	6635	16	67643	189	-2497	0	3prime_fragment	FALSE	canonical	3	104	junction_1	57.5171472017017	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20809767	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.142	chr2	+	4374	3	NIC	ENSMUSG00000036617.18	novel	6635	16	NA	NA	-2497	-227	intron_retention	FALSE	canonical	3	104	junction_1	61.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACATAGAGTAGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	20809767	20814938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20810474_20810585_20812836_20813520
ES.18433.143	chr2	+	4240	2	FSM	ENSMUSG00000036617.18	ENSMUST00000156587.2	2386	2	-2026	172	-2026	-2	multi-exon	FALSE	canonical	3	227	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTTTGTACCTTG	NA	False	NA	9	True	AATAAA	-16	NA	20810238	20815163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20812836_20813520
ES.18433.15	chr2	+	7827	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-182	0	intron_retention	FALSE	canonical	3	91	junction_16	37.313817650494	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4614	False	NA	22	True	AATAAA	-14	NA	20524419	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812836_20813520
ES.18433.16	chr2	+	6187	16	NIC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-182	0	intron_retention	FALSE	canonical	2	12	junction_15	50.0746109986555	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4614	False	NA	22	True	AATAAA	-14	NA	20524419	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712
ES.18433.17	chr2	+	5615	18	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-178	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	55.693613159076	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTCTGGACTTCCTTTC	4618	False	NA	23	True	AATAAA	-15	NA	20524423	20815336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802847_20803434_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.18	chr2	+	5432	18	FSM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	-178	-468	-178	-1	multi-exon	FALSE	canonical	2	10	junction_6	73.6055605692451	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4618	False	NA	10	True	AATAAA	-17	NA	20524423	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.2	chr2	+	6915	20	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.7631936637616	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCTGGACTTCCTTTCC	NA	False	NA	24	True	AATAAA	-16	NA	20514826	20815337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20514906_20534769_20534908_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.20	chr2	+	3113	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9567	24963	-177	-138	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGATTGTTGTGTAT	4619	False	NA	NA	False	NA	NA	NA	20524424	20790372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.21	chr2	+	7006	19	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.6618018502555	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4619	False	NA	10	True	AATAAA	-17	NA	20524424	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812839_20813520
ES.18433.22	chr2	+	5573	18	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_16	64.9343559930742	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4619	False	NA	20	True	AATAAA	-12	NA	20524424	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20812712_20812836_20813520
ES.18433.23	chr2	+	5584	18	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9567	0	-177	0	3prime_fragment	FALSE	canonical	3	21	junction_12	53.6124114122788	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4619	False	NA	22	True	AATAAA	-14	NA	20524424	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.24	chr2	+	3361	13	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	-177	24181	-177	5	5prime_fragment	FALSE	canonical	3	10	junction_6	70.6580183387247	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTGTTGTTTGT	4619	False	NA	31	True	AATATA	-32	NA	20524424	20790515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.25	chr2	+	6404	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	-251	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATATATTATGATATT	4619	False	NA	NA	False	AATAAA	-27	NA	20524424	20814445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.26	chr2	+	6973	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.818916200589	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGACAGCACATAGAGT	4619	False	NA	NA	False	AATAAA	-14	NA	20524424	20814932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812255_20812700_20812836_20813520
ES.18433.27	chr2	+	5208	18	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-177	-233	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_8	56.8932102297121	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGACAGCACATAGAGT	4619	False	NA	NA	False	AATAAA	-14	NA	20524424	20814932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782842_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.28	chr2	+	6868	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-176	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.5588580120318	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGACAGCACATAGAG	4620	False	NA	NA	False	AATAAA	-13	NA	20524425	20814931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771276_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.29	chr2	+	7270	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-176	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	53.6257163264375	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCCTTTCCTGCCTGAC	4620	False	NA	32	True	AATAAA	-24	NA	20524425	20815345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.3	chr2	+	7223	20	NIC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	56.6159731970813	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20514827	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20515071_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.30	chr2	+	3887	11	NIC	ENSMUSG00000036617.18	novel	4786	18	NA	NA	-175	769	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	60.3855115073144	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4621	False	NA	NA	False	NA	NA	NA	20524426	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20786608_20786757_20789854
ES.18433.31	chr2	+	5410	18	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9570	171	-174	-1	3prime_fragment	FALSE	canonical	3	21	junction_12	53.6124114122788	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4622	False	NA	10	True	AATAAA	-17	NA	20524427	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.32	chr2	+	4016	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9571	24056	-173	769	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4623	False	NA	NA	False	NA	NA	NA	20524428	20791279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.33	chr2	+	7170	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	54.0828125866615	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4623	False	NA	22	True	AATAAA	-14	NA	20524428	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.34	chr2	+	3940	14	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	-173	20671	-173	3515	5prime_fragment	FALSE	canonical	3	10	junction_6	67.9070021923039	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTACCACCATGAATG	4623	False	NA	7	True	ATTAAA	-19	NA	20524428	20794025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238
ES.18433.35	chr2	+	5689	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	50	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	39.7607427831356	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTTTAACTGTTAACA	4625	False	NA	NA	False	AATAAA	-21	NA	20524430	20813051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712
ES.18433.37	chr2	+	3830	13	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9573	21313	-171	3512	internal_fragment	FALSE	canonical	3	161	junction_12	17.9945979548184	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAGCTACCACCATGA	4625	False	NA	4	True	ATTAAA	-16	NA	20524430	20794022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238
ES.18433.38	chr2	+	12391	17	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	intron_retention	FALSE	canonical	3	21	junction_12	50.046853047919	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20810474_20810585
ES.18433.39	chr2	+	5958	21	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.374373783362	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4625	False	NA	20	True	AATAAA	-12	NA	20524430	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812063_20812185_20812712_20812836_20813520
ES.18433.4	chr2	+	6303	20	NIC	ENSMUSG00000036617.18	novel	5898	19	NA	NA	-30	-248	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	65.6908313127453	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATATTATGATATTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	20514827	20814448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20515071_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.41	chr2	+	5870	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	53.1669090845673	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4625	False	NA	20	True	AATAAA	-12	NA	20524430	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812712_20812836_20813520
ES.18433.42	chr2	+	7786	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	-2	intron_retention	FALSE	canonical	2	6	junction_16	72.7254264636584	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTTTGTACCTTG	4625	False	NA	9	True	AATAAA	-16	NA	20524430	20815163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712
ES.18433.43	chr2	+	5491	17	NIC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	49.746702152002	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.44	chr2	+	948	4	NNC	ENSMUSG00000036617.18	novel	3074	4	NA	NA	-171	5917	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.3097132110718	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTTGGTTGTGATGT	4625	False	NA	NA	False	NA	NA	NA	20524430	20673044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20672887
ES.18433.45	chr2	+	5285	17	NIC	ENSMUSG00000036617.18	novel	5898	19	NA	NA	-171	-3	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	63.4309417792295	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTTTTGTACCTT	4625	False	NA	8	True	AATAAA	-15	NA	20524430	20815162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.46	chr2	+	5716	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	65.8485214547584	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4625	False	NA	22	True	AATAAA	-14	NA	20524430	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.47	chr2	+	3589	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9580	24474	-164	351	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTTAGTGTGCTTT	4632	False	NA	NA	False	NA	NA	NA	20524437	20790861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.48	chr2	+	5666	19	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.9655542472953	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4633	False	NA	22	True	AATAAA	-14	NA	20524438	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20721011_20721078_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.49	chr2	+	6863	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-161	234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	56.8163196874409	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGACAGCACATAGA	4635	False	NA	NA	False	AATAAA	-12	NA	20524440	20814930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718175_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.5	chr2	+	7177	21	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	2922	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.585169437362	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20517779	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20517891_20534769_20535054_20666708_20666908_20710088_20710175_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.50	chr2	+	5644	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-161	48	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	53.4863834062142	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGATTTTAACTGTTAA	4635	False	NA	NA	False	AATAAA	-19	NA	20524440	20813049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712
ES.18433.51	chr2	+	5688	18	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-159	-467	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	36.8573421155144	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGCTGTTGATTCTGT	4637	False	NA	NA	False	ATTAAA	-15	NA	20524442	20812534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585
ES.18433.52	chr2	+	5690	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	53.1669090845673	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTGTC	4637	False	NA	11	True	AATAAA	-18	NA	20524442	20815165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812712_20812836_20813520
ES.18433.53	chr2	+	6763	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-158	-222	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	54.0828125866615	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGAGTAGTTTTCCCAC	4638	False	NA	NA	False	AATAAA	-25	NA	20524443	20814943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.54	chr2	+	7380	21	FSM	ENSMUSG00000036617.18	ENSMUST00000066509.10	7197	21	-195	12	-158	0	multi-exon	FALSE	canonical	3	10	junction_6	63.9268918374732	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4638	False	NA	22	True	AATAAA	-14	NA	20524443	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.55	chr2	+	11726	18	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-158	0	intron_retention	FALSE	canonical	3	104	junction_16	30.6074600219708	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4638	False	NA	22	True	AATAAA	-14	NA	20524443	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20810474_20810585_20812836_20813520
ES.18433.56	chr2	+	7787	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-156	-1	intron_retention	FALSE	canonical	3	91	junction_16	39.7607427831356	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	4640	False	NA	10	True	AATAAA	-17	NA	20524445	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712
ES.18433.57	chr2	+	5163	18	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9589	399	-155	-229	3prime_fragment	FALSE	canonical	3	21	junction_12	53.6124114122788	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGCACATAGAGTAGTT	4641	False	NA	NA	False	AATAAA	-18	NA	20524446	20814936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.59	chr2	+	5677	19	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-147	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.6039807361024	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGACTTCCTTTCCTG	4649	False	NA	26	True	AATAAA	-18	NA	20524454	20815339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20710088_20710175_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.6	chr2	+	3896	13	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9477	21310	-267	3515	internal_fragment	FALSE	canonical	3	21	junction_12	50.6340355448344	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTACCACCATGAATG	4529	False	NA	7	True	ATTAAA	-19	NA	20524334	20794025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238
ES.18433.61	chr2	+	5037	17	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-146	210	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	49.746702152002	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAATAAACATCAAA	4650	False	NA	NA	False	AATATA	-2	NA	20524455	20814906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.62	chr2	+	6123	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-146	-501	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGCTGTTGTAATT	4650	False	NA	NA	False	AGTAAA	-16	NA	20524455	20814195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.63	chr2	+	7059	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-145	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	53.6257163264375	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTGTC	4651	False	NA	11	True	AATAAA	-18	NA	20524456	20815165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.64	chr2	+	4636	18	NIC	ENSMUSG00000036617.18	novel	4786	18	NA	NA	-145	-262	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	81.0001922335281	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAATTGTAAAGCATAT	4651	False	NA	NA	False	AATAAA	-16	NA	20524456	20814434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.65	chr2	+	5426	16	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9600	7083	-144	11	internal_fragment	FALSE	canonical	3	155	junction_13	21.7128738053922	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCTGTGAAATCTAAACT	4652	False	NA	NA	False	TTTAAA	-17	NA	20524457	20808252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352
ES.18433.66	chr2	+	5156	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9630	398	-114	-228	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCACATAGAGTAGTTT	4682	False	NA	NA	False	AATAAA	-19	NA	20524487	20814937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.67	chr2	+	4026	13	NNC	ENSMUSG00000036617.18	novel	4786	18	NA	NA	-101	748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.5425162691967	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAGAGAAAAAAAAAAAAAA	4695	False	NA	NA	False	NA	NA	NA	20524500	20791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764359_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
ES.18433.68	chr2	+	5444	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	65.8485214547584	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTACCTTGTC	4727	False	NA	11	True	AATAAA	-18	NA	20524532	20815165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.69	chr2	+	5893	16	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-56	2	intron_retention	FALSE	canonical	2	12	junction_15	50.0746109986555	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGTACCTTGTCAC	4740	False	NA	13	True	AATAAA	-20	NA	20524545	20815167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712
ES.18433.7	chr2	+	4595	7	NNC	ENSMUSG00000036617.18	novel	4786	18	NA	NA	-215	7728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	71.4368407911648	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAACAAAAACT	4581	False	NA	NA	False	NA	NA	NA	20524386	20757355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749651_20755269
ES.18433.70	chr2	+	6968	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	56.8544333609771	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4816	False	NA	22	True	AATAAA	-14	NA	20524621	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790183_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.71	chr2	+	5268	17	NIC	ENSMUSG00000036617.18	novel	5898	19	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	63.4309417792295	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTCTGGACTTCCTTTC	4816	False	NA	23	True	AATAAA	-15	NA	20524621	20815336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.72	chr2	+	6049	21	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	77.8637271134641	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4823	False	NA	22	True	AATAAA	-14	NA	20524628	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20811042_20812712_20812836_20813520
ES.18433.73	chr2	+	3695	14	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	0	3513	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	78.2878923131811	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGCTACCACCATGAA	4833	False	NA	5	True	ATTAAA	-17	NA	20524638	20794023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238
ES.18433.74	chr2	+	3994	17	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	20081	1140	10300	-501	3prime_fragment	FALSE	canonical	3	69	junction_15	37.9583962220482	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGCTGTTGTAATT	NA	False	NA	NA	False	AGTAAA	-16	NA	20534938	20814195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.75	chr2	+	5621	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	10321	-497	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	54.9819555135934	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGTTGTAATTGCAT	NA	False	NA	NA	False	AGTAAA	-20	NA	20534959	20814199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.76	chr2	+	2153	1	Intergenic	novelGene_15324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTCAAATACTGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	20541413	20543566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20541400_20543600
ES.18433.77	chr2	+	5119	1	Intergenic	novelGene_15326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACTCTTTGAATTCTAG	NA	False	NA	NA	False	NA	NA	NA	20644839	20649958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20644800_20650000
ES.18433.78	chr2	+	6826	19	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-61540	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	57.8763048808981	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGCCTGACTCTTCTC	1427	False	NA	39	True	AATAAA	-31	NA	20656581	20815352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20656695_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.79	chr2	+	5126	17	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-61539	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69.0192172061521	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	1428	False	NA	20	True	AATAAA	-12	NA	20656582	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20656695_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.8	chr2	+	5665	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9530	-11	-214	0	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4582	False	NA	33	True	AATAAA	-25	NA	20524387	20815346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.80	chr2	+	6388	19	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-61517	-228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	57.8763048808981	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCACATAGAGTAGTTT	1450	False	NA	NA	False	AATAAA	-19	NA	20656604	20814937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20656695_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.81	chr2	+	4988	16	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-61516	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.4896099176121	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	1451	False	NA	22	True	AATAAA	-14	NA	20656605	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20656695_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.82	chr2	+	6659	18	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-61515	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7324099964832	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	1452	False	NA	20	True	AATAAA	-12	NA	20656606	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20656695_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.83	chr2	+	236	1	Intergenic	novelGene_15327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCAGCACTCGGGAGGA	395	False	NA	NA	False	NA	NA	NA	20672264	20672500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20672300_20672500
ES.18433.84	chr2	+	6521	18	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41467	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	67.3760299495652	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGGCCGTCTGGACTT	4785	False	NA	17	True	AATAAA	-9	NA	20676654	20815330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.85	chr2	+	6559	18	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41467	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	57.8939491014437	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4785	False	NA	22	True	AATAAA	-14	NA	20676654	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.86	chr2	+	6644	19	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41466	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.0621700595437	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	4786	False	NA	22	True	AATAAA	-14	NA	20676655	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20710088_20710175_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.87	chr2	+	4877	16	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41466	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	69.6753104685504	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCGTCTGGACTTCCTT	4786	False	NA	21	True	AATAAA	-13	NA	20676655	20815334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.88	chr2	+	6264	16	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41466	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.4969332580941	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCGTCTGGACTTCCTT	4786	False	NA	21	True	AATAAA	-13	NA	20676655	20815334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.89	chr2	+	6656	19	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41466	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.6527574479051	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	4786	False	NA	20	True	AATAAA	-12	NA	20676655	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676745_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.9	chr2	+	7333	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-214	2	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCTGGACTTCCTTTCC	4582	False	NA	24	True	AATAAA	-16	NA	20524387	20815337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.90	chr2	+	6681	17	NNC	ENSMUSG00000036617.18	novel	407	3	NA	NA	-41466	234	intron_retention	FALSE	canonical	3	8	junction_1	57.5515733386152	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTGACAGCACATAGA	4786	False	NA	NA	False	AATAAA	-12	NA	20676655	20814930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20676717_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812836_20813520
ES.18433.91	chr2	+	2540	1	Intergenic	novelGene_15328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20696546	20699086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20696500_20699100
ES.18433.92	chr2	+	4598	15	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-3735	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	92.6147660902903	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20714386	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802690_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.93	chr2	+	6841	16	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-673	-4	combination_of_known_junctions	FALSE	canonical	3	91	junction_12	44.7131101828337	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTTTTTTTGTACCT	NA	False	NA	7	True	AATAAA	-14	NA	20717448	20815161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.94	chr2	+	7012	16	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-670	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_12	44.7131101828337	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20717451	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.95	chr2	+	5332	14	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	202597	0	-667	0	3prime_fragment	FALSE	canonical	3	69	junction_12	41.8944856633195	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20717454	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18433.96	chr2	+	6515	16	NIC	ENSMUSG00000036617.18	novel	3055	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	71.1331771319747	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	2634	False	NA	20	True	AATAAA	-12	NA	20727188	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20727535_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.97	chr2	+	4750	13	NIC	ENSMUSG00000036617.18	novel	3055	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	74.7094371548869	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGTCTGGACTTCCT	2635	False	NA	20	True	AATAAA	-12	NA	20727189	20815333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20727535_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
ES.18433.98	chr2	+	6374	16	NNC	ENSMUSG00000036617.18	novel	3055	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	70.5267797837578	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTGTACCTTGT	2636	False	NA	10	True	AATAAA	-17	NA	20727190	20815164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_20727535_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ES.18433.99	chr2	+	4869	14	NIC	ENSMUSG00000036617.18	novel	3055	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	63.6019425850478	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	2638	False	NA	22	True	AATAAA	-14	NA	20727192	20815335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_20727535_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
ES.18434.1	chr2	+	1807	1	Intergenic	novelGene_15333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGACTTCTTTTGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	20816398	20818205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20816400_20818200
ES.18435.1	chr2	-	130	1	Intergenic	novelGene_15323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20521488	20521358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20521400_20521500
ES.18436.1	chr2	-	1641	5	NNC	ENSMUSG00000086418.2	novel	839	2	NA	NA	-958	189568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGAAAGCTCGCAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	20719003	20524617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20524739_20534769_20535051_20666705_20666907_20714214_20714413_20718163
ES.18436.2	chr2	-	5308	1	Antisense	novelGene_ENSMUSG00002076489.1_AS_novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTATTGATTCTTTG	NA	False	NA	NA	False	NA	NA	NA	20566735	20561427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_20561400_20566700
ES.18436.3	chr2	-	1170	1	Intergenic	novelGene_15325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	20567568	20566398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20566400_20567600
ES.18436.4	chr2	-	641	2	Antisense	novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGCAGAATCTATCAA	NA	False	NA	NA	False	AATAAA	-23	NA	20600866	20592339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_20592813_20600698
ES.18436.5	chr2	-	172	1	Intergenic	novelGene_15329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	20711529	20711357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20711400_20711500
ES.18437.1	chr2	-	4510	1	Antisense	novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCGTGTAAGAAAAAGACAAG	NA	False	NA	NA	False	NA	NA	NA	20731602	20727092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_20727100_20731600
ES.18438.1	chr2	-	183	1	Intergenic	novelGene_15331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	20781693	20781510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20781500_20781700
ES.18439.1	chr2	-	4511	1	Antisense	novelGene_ENSMUSG00000036617.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTCACGCTTGCGTAT	NA	False	NA	NA	False	NA	NA	NA	20818949	20814438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_20814400_20818900
ES.1844.1	chr1	+	5209	2	Antisense	novelGene_ENSMUSG00000026670.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAAACAAACAAAAAGAA	1125	False	NA	NA	False	NA	NA	NA	169970894	169976158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_169972723_169972777
ES.1844.2	chr1	+	155	1	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGGGAGGGGGGG	4839	False	NA	NA	False	NA	NA	NA	169974608	169974763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_169974600_169974800
ES.18440.1	chr2	-	3006	1	Intergenic	novelGene_15334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	20824856	20821850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20821800_20824900
ES.18441.1	chr2	+	175	1	Intergenic	novelGene_15335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAAGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	20835310	20835485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20835300_20835500
ES.18442.1	chr2	+	3058	1	Antisense	novelGene_ENSMUSG00000036591.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAACTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	20871787	20874845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_20871800_20874800
ES.18443.1	chr2	+	1237	1	Intergenic	novelGene_15340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	75	False	NA	NA	False	NA	NA	NA	20968812	20970049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20968800_20970000
ES.18443.2	chr2	+	406	1	Intergenic	novelGene_15339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCAACAACAAGCTAAACC	75	False	NA	NA	False	NA	NA	NA	20968812	20969218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20968800_20969200
ES.18444.1	chr2	+	1737	2	FSM	ENSMUSG00000075514.5	ENSMUST00000126967.2	854	2	-532	-351	-532	351	multi-exon	FALSE	canonical	3	36	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTATATTTGTGATT	3077	False	NA	8	True	AATAAA	-19	NA	20973332	20975159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_20974195_20974284
ES.18444.2	chr2	+	1790	1	Genic_Genomic	ENSMUSG00000075514.5	novel	NA	NA	NA	NA	-495	351	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTGTATATTTGTGATT	3114	False	NA	8	True	AATAAA	-19	NA	20973369	20975159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_20973400_20975200
ES.18445.1	chr2	-	8088	25	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-696	53	intron_retention	FALSE	canonical	3	40	junction_24	19.6061480578585	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTATTTATTATATG	NA	False	NA	53	True	NA	NA	NA	20974388	20852676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18445.10	chr2	-	4640	18	NNC	ENSMUSG00000036591.17	novel	4299	20	NA	NA	2842	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	28.5502046726676	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20885198	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866064_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ES.18445.11	chr2	-	7538	23	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	31	5	intron_retention	FALSE	canonical	3	31	junction_22	19.4706814985128	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20973405	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.15	chr2	-	7005	24	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	32	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	33.9217937429205	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20973404	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.18	chr2	-	6966	25	NNC	ENSMUSG00000036591.17	novel	6972	25	NA	NA	32	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	35.7531807054359	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGGGAGCTTACTT	NA	False	NA	-17	True	AATAAA	-19	NA	20973404	20852746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855133_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972528_20973297
ES.18445.19	chr2	-	7616	24	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	31	4	intron_retention	FALSE	canonical	3	31	junction_23	21.2477509095564	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGGGAGCTTACTT	NA	False	NA	-17	True	AATAAA	-19	NA	20973405	20852746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.20	chr2	-	6601	25	NNC	ENSMUSG00000036591.17	novel	6972	25	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5676865833071	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGGGAGCTTACTT	NA	False	NA	-17	True	AATAAA	-19	NA	20972534	20852746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20853678_20854003_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
ES.18445.23	chr2	-	6805	25	NNC	ENSMUSG00000036591.17	novel	7351	26	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	28.2070716113688	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973408	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972369_20972532_20973294
ES.18445.24	chr2	-	6777	23	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	328	0	intron_retention	FALSE	canonical	3	74	junction_21	15.2900334848208	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20972203	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
ES.18445.25	chr2	-	5528	18	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	1929	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_10	34.0119051007337	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20886111	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865237_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ES.18445.27	chr2	-	7179	17	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	-3339	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_11	26.3912864407933	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20879549	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420
ES.18445.28	chr2	-	9957	23	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	27	0	intron_retention	FALSE	canonical	2	15	junction_9	27.2023333952946	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973409	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18445.29	chr2	-	7316	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	24.4408299095318	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973266	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972870
ES.18445.31	chr2	-	7042	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	28.2163947122157	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20973409	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863809_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18445.32	chr2	-	7028	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	-425	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.5676865833071	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20974117	20852750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20974009
ES.18445.36	chr2	-	7019	24	NNC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	33.134428607843	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCACTGTTGGGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	20973407	20852752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20919432_20919623_20972140_20972532_20973294
ES.18445.38	chr2	-	6698	1	NIC	ENSMUSG00000036591.17	novel	6972	25	NA	NA	-8	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCACTGTTGGGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	20859450	20852752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20852800_20859400
ES.18445.39	chr2	-	6936	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	23	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	24.9203940913194	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGCACTGTTGGGAG	NA	False	NA	-24	True	AATAAA	-12	NA	20973272	20852753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973253
ES.18445.4	chr2	-	7186	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	86	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.5676865833071	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTTACTTGGTTTTAC	NA	False	NA	-9	True	AATAAA	-27	NA	20973209	20852738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972955
ES.18445.40	chr2	-	7164	24	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	101	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	36.2462696079402	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGCACTGTTGGGA	NA	False	NA	-25	True	AATAAA	-11	NA	20973194	20852754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865922_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972870
ES.18445.42	chr2	-	6682	25	NIC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	21	291	combination_of_known_junctions	FALSE	canonical	3	31	junction_24	20.8291662499166	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTCCTTCCATTTACC	NA	False	NA	NA	False	AATAAA	-21	NA	20973415	20853113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.44	chr2	-	6815	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	75	284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.5676865833071	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAACAAGTTTCCTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	20973220	20853120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972955
ES.18445.45	chr2	-	8040	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-696	10629	intron_retention	FALSE	canonical	0	0	junction_7	31.453885908986	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTATACTTTTCTATTA	NA	False	NA	NA	False	AATAAA	-42	NA	20974388	20880539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972528_20973290
ES.18445.48	chr2	-	5483	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	24	9044	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	20.9810410045034	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAACTAAGAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	20973412	20882124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.49	chr2	-	7095	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-3	9044	intron_retention	FALSE	canonical	0	0	junction_1	33.621543142237	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAACTAAGAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	20973646	20882124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20888041_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973290
ES.18445.50	chr2	-	6327	1	NIC	ENSMUSG00000036591.17	novel	6972	25	NA	NA	-432	9023	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20888472	20882145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20882100_20888500
ES.18445.51	chr2	-	3124	8	NIC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	32	6697	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.023793797565	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGGCATCTAGTGTG	NA	False	NA	NA	False	AATATA	-27	NA	20973404	20884471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18445.52	chr2	-	3221	8	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	29	6508	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	29.0650221091277	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTAAGTGCTGTATAC	NA	False	NA	NA	False	TTTAAA	-1	NA	20973266	20884660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20972870
ES.18445.53	chr2	-	3260	7	ISM	ENSMUSG00000036591.17	ENSMUST00000173194.8	6920	24	-758	32233	6	6185	5prime_fragment	FALSE	canonical	3	74	junction_5	7.22072634081149	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGAAACCTCAGTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	20973289	20884983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
ES.18445.54	chr2	-	176	2	Intergenic	novelGene_15336	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	20902735	20902520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20902574_20902612
ES.18445.55	chr2	-	4538	3	Genic_Genomic	ENSMUSG00000085206.2	novel	718	2	NA	NA	-1270	-3703	multi-exon	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAGAAAGGA	5963	False	NA	NA	False	AATAAA	-26	NA	20937470	20930373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_20933823_20936181_20936540_20936739
ES.18445.56	chr2	-	212	1	Intergenic	novelGene_15337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAGTAAGCA	9615	False	NA	NA	False	NA	NA	NA	20933818	20933606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20933600_20933800
ES.18445.57	chr2	-	174	1	Intergenic	novelGene_15338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	20956791	20956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20956600_20956800
ES.18445.7	chr2	-	7252	25	NNC	ENSMUSG00000036591.17	novel	6920	24	NA	NA	-127	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.5676865833071	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20973819	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973492
ES.18445.8	chr2	-	7367	25	NNC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-108	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.1562789030558	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20973800	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864784_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18445.9	chr2	-	7408	25	NNC	ENSMUSG00000036591.17	novel	6339	26	NA	NA	-28	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27.7943526937878	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGGGAGCTTACTTG	NA	False	NA	-16	True	AATAAA	-20	NA	20973365	20852745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_20855609_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140_20972532_20973294
ES.18446.1	chr2	+	318	1	Intergenic	novelGene_15341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20980391	20980709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_20980400_20980700
ES.18447.1	chr2	-	179	1	Intergenic	novelGene_15342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGAAAAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	20990720	20990541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_20990500_20990700
ES.18448.1	chr2	-	166	1	Intergenic	novelGene_15343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTGTTGGTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	21003393	21003227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_21003200_21003400
ES.18449.1	chr2	+	2646	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	-23	1276	-23	454	multi-exon	FALSE	canonical	3	53	junction_1	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCTTTATTTT	4761	False	NA	15	True	AATAAA	-24	NA	21210511	21218544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_21210657_21214695_21214853_21216200
ES.18449.2	chr2	+	3575	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	4	320	4	313	multi-exon	FALSE	canonical	3	53	junction_1	4.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTCTCTGGTTTTGCTT	4788	False	NA	NA	False	ATTAAA	-18	NA	21210538	21219500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_21210657_21214695_21214853_21216200
ES.18449.3	chr2	+	1995	3	FSM	ENSMUSG00000048550.18	ENSMUST00000102952.8	1679	3	-9	-307	6	307	multi-exon	FALSE	canonical	2	4	junction_2	24.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATCAGCTCTCTGGTT	4790	False	NA	NA	False	ATTAAA	-12	NA	21210540	21219494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_21210657_21214695_21214853_21217772
ES.18449.4	chr2	+	2759	3	FSM	ENSMUSG00000048550.18	ENSMUST00000138914.8	527	3	-43	-2189	6	452	multi-exon	FALSE	canonical	0	0	junction_1	31	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATAGCATTTGCTTTATT	4790	False	NA	13	True	AATAAA	-22	NA	21210540	21218542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_21210801_21214695_21214853_21216200
ES.18449.5	chr2	+	3192	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	9	698	-6	3	multi-exon	FALSE	canonical	3	53	junction_1	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCTGTATTATTTTTA	4793	False	NA	NA	False	ATTAAA	-19	NA	21210543	21219122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_21210657_21214695_21214853_21216200
ES.18449.6	chr2	+	3779	3	NNC	ENSMUSG00000048550.18	novel	3899	3	NA	NA	-4	311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGCTCTCTGGTTTTGC	4795	False	NA	NA	False	ATTAAA	-16	NA	21210545	21219498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_21210870_21214695_21214853_21216200
ES.18449.7	chr2	+	4247	3	NNC	ENSMUSG00000048550.18	novel	3899	3	NA	NA	0	450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAATAGCATTTGCTTTA	4847	False	NA	11	True	AATAAA	-20	NA	21210597	21218540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_21212348_21214695_21214853_21216200
ES.1845.1	chr1	+	173	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACCCACACACATCT	NA	False	NA	NA	False	NA	NA	NA	169982344	169982517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_169982300_169982500
ES.18450.1	chr2	-	3091	1	Intergenic	novelGene_15344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21460641	21457550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_21457600_21460600
ES.18451.1	chr2	+	204	1	Intergenic	novelGene_15345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTTCAACTGTTAAAC	NA	False	NA	NA	False	NA	NA	NA	21772037	21772241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_21772000_21772200
ES.18452.1	chr2	+	177	1	Intergenic	novelGene_15346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTCATTTTAG	NA	False	NA	NA	False	NA	NA	NA	22343877	22344054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_22343900_22344100
ES.18453.1	chr2	-	130	1	FSM	ENSMUSG00000083563.2	ENSMUST00000117219.2	1545	1	1481	-66	1481	66	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAGTAAAATC	NA	False	NA	NA	False	NA	NA	NA	22478178	22478048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22478000_22478200
ES.18454.1	chr2	-	99	1	Intergenic	novelGene_15347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTATGTTCATTAATCGT	NA	False	NA	NA	False	TTTAAA	-44	NA	22479763	22479664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22479700_22479800
ES.18455.1	chr2	+	4528	11	ISM	ENSMUSG00000026787.4	ENSMUST00000028123.4	5744	16	7816	74	6717	-74	3prime_fragment	FALSE	canonical	0	0	junction_1	0.66332495807108	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTTGTGTATGATCA	NA	False	NA	-59	True	AATAAA	-34	NA	22520032	22583812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22520073_22524941_22525058_22540240_22540321_22556246_22556302_22558258_22558376_22559712_22559778_22563955_22564035_22571299_22571450_22574970_22575079_22575391_22575482_22580184
ES.18456.1	chr2	-	175	1	Intergenic	novelGene_15348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	22781077	22780902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22780900_22781100
ES.18457.1	chr2	+	1678	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	-38	2	-38	-2	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5570	False	NA	17	True	AATAAA	-19	NA	22785495	22830276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.11	chr2	+	5047	8	ISM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	55	6547	-18	-6523	intron_retention	FALSE	canonical	3	239	junction_4	20.9177202488264	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCTCACT	5663	False	NA	NA	False	AAAAAG	-12	NA	22785588	22823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551
ES.18457.12	chr2	+	5082	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-16	-6511	intron_retention	FALSE	canonical	3	18	junction_1	121.387147203371	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACTGAATCTGGGATG	5665	False	NA	NA	False	AAAAAG	-24	NA	22785590	22823743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755
ES.18457.13	chr2	+	1509	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-14	2	intron_retention	FALSE	canonical	2	3	junction_1	85.1196688474019	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5667	False	NA	10	True	AATAAA	-12	NA	22785592	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22785775_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.14	chr2	+	1771	10	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-11	-5208	intron_retention	FALSE	canonical	2	3	junction_9	87.1881745294497	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCAGTATAATCAGATT	5670	False	NA	NA	False	ATTAAA	-16	NA	22785595	22825046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22824330
ES.18457.15	chr2	+	1326	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-11	-3597	intron_retention	FALSE	canonical	2	2	junction_10	83.2019230546987	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGGATCAGTTTCCAA	5670	False	NA	NA	False	CATAAA	-15	NA	22785595	22826657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22826467
ES.18457.16	chr2	+	3603	9	ISM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	64	7859	-9	-7835	5prime_fragment	FALSE	canonical	3	239	junction_4	21.2602916254693	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGACTGAGTCTTCTA	5672	False	NA	NA	False	NA	NA	NA	22785597	22822419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755
ES.18457.17	chr2	+	1725	12	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	18	junction_1	124.03371975541	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5675	False	NA	17	True	AATAAA	-19	NA	22785600	22830276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.18	chr2	+	4032	10	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	31	junction_6	78.9187736822245	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5677	False	NA	14	True	AATAAA	-16	NA	22785602	22830273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.19	chr2	+	5118	8	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-4	-6525	intron_retention	FALSE	canonical	3	20	junction_4	116.169650748817	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAAAAAAAAAGTCTCA	5677	False	NA	NA	False	AAAAAG	-10	NA	22785602	22823729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551
ES.18457.2	chr2	+	2115	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-36	-2906	intron_retention	FALSE	canonical	2	2	junction_10	83.2019230546987	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAGATACTGAATTCTT	5572	False	NA	NA	False	AATAAA	-11	NA	22785497	22827348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22826467
ES.18457.20	chr2	+	1537	10	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-4	2	intron_retention	FALSE	canonical	3	20	junction_4	120.429580878691	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5677	False	NA	10	True	AATAAA	-12	NA	22785602	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22825570_22825652_22829834
ES.18457.21	chr2	+	2890	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	1	-5	intron_retention	FALSE	canonical	2	3	junction_9	122.35015324878	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5682	False	NA	14	True	AATAAA	-16	NA	22785607	22830273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22824330_22825652_22829834
ES.18457.22	chr2	+	4393	9	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	6	-7115	intron_retention	FALSE	non_canonical	0	0	junction_6	117.90568264507	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTGTCCCTGCAGTG	5687	False	NA	NA	False	TATAAA	-12	NA	22785612	22823139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805328_22805426_22805537_22819551_22819633_22819755
ES.18457.23	chr2	+	4108	10	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	20	junction_4	106.962206317217	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5687	False	NA	17	True	AATAAA	-19	NA	22785612	22830276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.24	chr2	+	1548	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_8	83.1868379011969	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAAGTGGTTTGTC	5689	False	NA	9	True	AATAAA	-11	NA	22785614	22830268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819637_22819762_22819870_22825570_22825652_22829834
ES.18457.25	chr2	+	4060	12	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	8	3565	intron_retention	FALSE	non_canonical	0	0	junction_11	118.313772487951	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTATTCTTAACAGTAT	5689	False	NA	NA	False	AATATA	-17	NA	22785614	22833843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834_22832260_22833412
ES.18457.26	chr2	+	1687	12	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	9	2	intron_retention	FALSE	canonical	0	0	junction_11	106.046613795635	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5690	False	NA	10	True	AATAAA	-12	NA	22785615	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22826467_22826604_22829834
ES.18457.27	chr2	+	4909	9	ISM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	82	6535	9	-6511	5prime_fragment	FALSE	canonical	3	239	junction_4	21.2602916254693	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACTGAATCTGGGATG	5690	False	NA	NA	False	AAAAAG	-24	NA	22785615	22823743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755
ES.18457.28	chr2	+	4989	9	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-8	-6511	intron_retention	FALSE	canonical	3	20	junction_4	112.363180691007	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACTGAATCTGGGATG	5697	False	NA	NA	False	AAAAAG	-24	NA	22785622	22823743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755
ES.18457.3	chr2	+	1686	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	34	2	intron_retention	FALSE	canonical	3	20	junction_4	102.88192261034	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5642	False	NA	10	True	AATAAA	-12	NA	22785567	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.30	chr2	+	1509	7	FSM	ENSMUSG00000026784.15	ENSMUST00000152170.8	1538	7	28	1	4	-1	multi-exon	FALSE	canonical	3	239	junction_4	18.6696426199206	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTGGTCCTCTTTA	5709	False	NA	NA	False	ATTAAA	-16	NA	22785634	22806224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426
ES.18457.31	chr2	+	1309	9	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	36	2	intron_retention	FALSE	canonical	2	2	junction_7	92.0987920659115	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5741	False	NA	10	True	AATAAA	-12	NA	22785666	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805541_22825570_22825652_22829834
ES.18457.32	chr2	+	3796	11	NNC	ENSMUSG00000026784.15	novel	486	5	NA	NA	2670	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.6385676587064	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	3029	False	NA	17	True	AATAAA	-19	NA	22788729	22830276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22791127_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.33	chr2	+	5448	4	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	18001	-6511	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	118.797680486148	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACTGAATCTGGGATG	4432	False	NA	NA	False	AAAAAG	-24	NA	22804060	22823743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22805326_22805426_22805541_22819551_22819633_22819755
ES.18457.34	chr2	+	820	5	ISM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	19892	11	-18709	0	3prime_fragment	FALSE	canonical	3	241	junction_1	20.7665596572952	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTCAAGTGGTTTGT	669	False	NA	8	True	AATAAA	-10	NA	22805425	22830267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.35	chr2	+	158	1	Intergenic	novelGene_15351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	6028	False	NA	NA	False	NA	NA	NA	22810784	22810942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_22810800_22810900
ES.18457.36	chr2	+	3282	2	FSM	ENSMUSG00000026784.15	ENSMUST00000139472.2	1950	2	-1330	-2	-1330	2	multi-exon	FALSE	canonical	3	284	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	6277	False	NA	10	True	AATAAA	-12	NA	22822804	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22825652_22829834
ES.18457.37	chr2	+	4820	1	Genic_Genomic	ENSMUSG00000026784.15	novel	NA	NA	NA	NA	3141	3253	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCAAGCCAGGGGAAG	5190	False	NA	NA	False	NA	NA	NA	22828711	22833531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_22828700_22833500
ES.18457.38	chr2	+	889	1	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	3810	2	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	5859	False	NA	10	True	AATAAA	-12	NA	22829380	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22829400_22830300
ES.18457.4	chr2	+	1549	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_8	83.1868379011969	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTCAAGTGGTTTGT	5648	False	NA	8	True	AATAAA	-10	NA	22785573	22830267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819797_22819870_22825570_22825652_22829834
ES.18457.5	chr2	+	3426	12	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-32	-5	intron_retention	FALSE	canonical	1	2	junction_6	130.572357319104	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGTGGTTTGTCTTTGT	5649	False	NA	14	True	AATAAA	-16	NA	22785574	22830273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22804432_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18457.7	chr2	+	1481	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTGTCTTTGTTTC	5653	False	NA	17	True	AATAAA	-19	NA	22785578	22830276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
ES.18457.9	chr2	+	1651	12	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	-27	1	intron_retention	FALSE	canonical	3	18	junction_1	98.1149604012836	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTCAAGTGGTTTGTC	5654	False	NA	9	True	AATAAA	-11	NA	22785579	22830268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22785775_22789930_22789996_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ES.18458.1	chr2	+	4174	1	Antisense	novelGene_ENSMUSG00000058835.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAATATCATGTGTTT	425	False	NA	NA	False	NA	NA	NA	22834747	22838921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_22834700_22838900
ES.18459.1	chr2	+	1779	1	Intergenic	novelGene_15354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCGGGAAAACGAATAGT	1620	False	NA	NA	False	NA	NA	NA	22876466	22878245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_22876500_22878200
ES.1846.1	chr1	+	1321	1	Antisense	novelGene_ENSMUSG00000026670.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCCAGGAAAGAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	169994515	169995836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_169994500_169995800
ES.18460.1	chr2	+	3635	3	Antisense	novelGene_ENSMUSG00000083650.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAGATTAA	NA	False	NA	NA	False	CATAAA	-13	NA	22893244	22919759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_22893434_22913431_22913528_22916409
ES.18461.1	chr2	+	173	1	Intergenic	novelGene_15355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	8613	False	NA	NA	False	NA	NA	NA	22923285	22923458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_22923300_22923500
ES.18462.1	chr2	-	160	1	Intergenic	novelGene_15349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	22801880	22801720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22801700_22801900
ES.18463.1	chr2	-	4030	1	Intergenic	novelGene_15350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22813363	22809333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22809300_22813400
ES.18464.1	chr2	-	164	1	Intergenic	novelGene_15352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	22814357	22814193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22814200_22814400
ES.18465.1	chr2	-	241	1	Intergenic	novelGene_15353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAGTGAAGCTCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	22816394	22816153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_22816200_22816400
ES.18466.1	chr2	-	3260	10	FSM	ENSMUSG00000058835.15	ENSMUST00000078977.14	3027	10	76	-309	-14	13	multi-exon	FALSE	canonical	2	7	junction_7	139.976188451227	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTGGTTTTCTGCAC	NA	False	NA	4	True	AATAAA	-38	NA	22930166	22830071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ES.18466.10	chr2	-	3282	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	23	-2	1	2	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTGAAATTATTTCTT	NA	False	NA	-20	True	AATAAA	-14	NA	22930230	22830095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.11	chr2	-	3205	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	13	185	2	50	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTGATTATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	22930240	22830269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.13	chr2	-	3120	11	FSM	ENSMUSG00000058835.15	ENSMUST00000123948.8	3067	11	-93	40	4	16	multi-exon	FALSE	canonical	2	7	junction_8	119.179906024464	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAACTAATGTGGATTTA	NA	False	NA	14	True	AATAAA	-37	NA	22930227	22830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ES.18466.14	chr2	-	6196	9	NIC	ENSMUSG00000058835.15	novel	3403	10	NA	NA	-18	3	intron_retention	FALSE	canonical	3	130	junction_3	65.2011311251576	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATTGTTAAAGTATAAC	NA	False	NA	1	True	AATAAA	-24	NA	22930170	22830372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.17	chr2	-	2872	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	102.107480137353	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930187	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22884534_22884703_22929960
ES.18466.18	chr2	-	3048	10	NNC	ENSMUSG00000058835.15	novel	3023	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.492495783665	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930228	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836735_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.2	chr2	-	3309	11	NNC	ENSMUSG00000058835.15	novel	3023	11	NA	NA	-87	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.316548983705	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGATTTTTGGTTTTC	NA	False	NA	-1	True	AATAAA	-33	NA	22930340	22830076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960_22930101_22930289
ES.18466.20	chr2	-	2961	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	64	278	8	0	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930189	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.21	chr2	-	3011	11	NNC	ENSMUSG00000058835.15	novel	3023	11	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.316548983705	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930341	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960_22930101_22930289
ES.18466.22	chr2	-	3015	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	107.170133432781	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930254	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22861094_22861272_22884534_22884703_22929960
ES.18466.23	chr2	-	2989	10	NNC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.722329472272	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930136	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847122_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.24	chr2	-	3107	11	NNC	ENSMUSG00000058835.15	novel	3023	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	119.632311688774	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930172	22830375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22921111_22921188_22929960
ES.18466.25	chr2	-	2866	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	103.785837184078	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930186	22830380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.26	chr2	-	8967	2	FSM	ENSMUSG00000058835.15	ENSMUST00000135308.2	875	2	-6653	-1439	-3561	0	multi-exon	FALSE	canonical	3	323	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22843875	22830380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587
ES.18466.27	chr2	-	3167	11	NNC	ENSMUSG00000058835.15	novel	3067	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.171559701921	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930230	22830380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22841668_22841749_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.28	chr2	-	3127	11	NNC	ENSMUSG00000058835.15	novel	3023	11	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	122.132919395223	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930202	22830380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22851072_22851144_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.30	chr2	-	2250	4	NIC	ENSMUSG00000058835.15	novel	2790	8	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	151.561502001296	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATTTGGATATTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	22930179	22830382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22884534_22884703_22929960
ES.18466.32	chr2	-	2914	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-24	470	0	-174	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGATTCCATATATATT	NA	False	NA	-11	True	ATTAAA	-20	NA	22930231	22830554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.34	chr2	-	2826	9	NIC	ENSMUSG00000058835.15	novel	3027	10	NA	NA	1	-174	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	102.292396467186	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGATTCCATATATATT	NA	False	NA	-11	True	ATTAAA	-20	NA	22930230	22830554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.36	chr2	-	2804	10	NNC	ENSMUSG00000058835.15	novel	3403	10	NA	NA	11	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.764513629239	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGATTCCATATATATT	NA	False	NA	-11	True	ATTAAA	-20	NA	22930186	22830554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_22832060_22836587_22836774_22841723_22841749_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.37	chr2	-	2228	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-23	1155	1	5	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCCTCTCCTTTACT	NA	False	NA	0	True	TATAAA	-36	NA	22930230	22831239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.38	chr2	-	1765	7	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	11	5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	109.566823851424	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCCTCTCCTTTACT	NA	False	NA	0	True	TATAAA	-36	NA	22930186	22831239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22884534_22884703_22929960
ES.18466.39	chr2	-	4707	2	FSM	ENSMUSG00000058835.15	ENSMUST00000135308.2	875	2	-3256	-576	-164	1	multi-exon	FALSE	canonical	3	323	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTTTGGCCTCTCCTT	NA	False	NA	-4	True	TATAAA	-32	NA	22840478	22831243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587
ES.18466.4	chr2	-	3075	8	FSM	ENSMUSG00000058835.15	ENSMUST00000114544.10	2790	8	11	-296	11	0	multi-exon	FALSE	canonical	1	1	junction_2	109.731955422367	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTTAAAATGATTTT	NA	False	NA	-9	True	AATAAA	-25	NA	22930186	22830084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.40	chr2	-	2012	9	NIC	ENSMUSG00000058835.15	novel	2239	11	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	102.292396467186	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22930106	22831244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.42	chr2	-	2797	4	ISM	ENSMUSG00000058835.15	ENSMUST00000178908.2	2239	11	85076	0	-4841	0	3prime_fragment	FALSE	canonical	3	223	junction_2	42.6249796350554	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22845155	22831244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446
ES.18466.43	chr2	-	3304	3	FSM	ENSMUSG00000058835.15	ENSMUST00000148294.2	541	3	-2184	-579	-2184	0	multi-exon	FALSE	canonical	3	223	junction_2	50	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22842498	22831244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195
ES.18466.44	chr2	-	2006	9	NIC	ENSMUSG00000058835.15	novel	2239	11	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	102.107480137353	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22930190	22831244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22884534_22884703_22929960
ES.18466.45	chr2	-	2050	9	NIC	ENSMUSG00000058835.15	novel	3403	10	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	103.785837184078	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAAGGATTTTGGCCTC	NA	False	NA	-9	True	TATAAA	-27	NA	22930238	22831248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.46	chr2	-	2085	9	NIC	ENSMUSG00000058835.15	novel	3403	10	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	110.457500311206	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAAGGATTTTGGCCTC	NA	False	NA	-9	True	TATAAA	-27	NA	22930200	22831248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22861094_22861272_22884534_22884703_22929960
ES.18466.47	chr2	-	2000	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	-2	1305	-2	-158	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGTAACGATTATCT	NA	False	NA	NA	False	CATAAA	-43	NA	22930255	22831402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.5	chr2	-	2828	6	NIC	ENSMUSG00000058835.15	novel	3303	9	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	139.53551519237	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTTCTTAAAATGAT	NA	False	NA	-12	True	AATAAA	-22	NA	22930187	22830087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22884534_22884703_22929960
ES.18466.7	chr2	-	4947	9	NIC	ENSMUSG00000058835.15	novel	3360	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	161	junction_4	57.4630315942346	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTTCTTAAAATGAT	NA	False	NA	-12	True	AATAAA	-22	NA	22930244	22830087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22852514_22861094_22861272_22884534_22884703_22929960
ES.18466.8	chr2	-	3395	11	FSM	ENSMUSG00000058835.15	ENSMUST00000123948.8	3067	11	-96	-232	1	-3	multi-exon	FALSE	canonical	2	7	junction_8	119.179906024464	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTTCTTAAAATGAT	NA	False	NA	-12	True	AATAAA	-22	NA	22930230	22830087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ES.18467.1	chr2	+	179	1	Intergenic	novelGene_15356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	2219	False	NA	NA	False	NA	NA	NA	22930778	22930957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_22930800_22931000
ES.18468.1	chr2	+	3540	12	NIC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.5358043166291	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958145	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22958299_22959462_22959632_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.10	chr2	+	2211	11	NNC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.1863722071477	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22958221	22991439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984310_22984530_22989573_22989777_22990645
ES.18468.13	chr2	+	4801	14	NIC	ENSMUSG00000026781.18	novel	4566	14	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	39.0328340013573	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTTTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	22958239	23005573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22958299_22958891_22959078_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.15	chr2	+	3580	13	NNC	ENSMUSG00000026781.18	novel	1986	13	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.3037415392004	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCTAACTGTATTGA	NA	False	NA	NA	False	AATAAA	-15	NA	22958249	23004520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002488
ES.18468.17	chr2	+	3746	15	NNC	ENSMUSG00000026781.18	novel	4566	14	NA	NA	34	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	46.0890885311551	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958280	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22958299_22958720_22958773_22958891_22959078_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000274_23000299_23000665_23000776_23002516
ES.18468.18	chr2	+	3745	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	-17	-98	-16	0	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959062	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.2	chr2	+	3660	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	-66	-1608	-32	0	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958146	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.20	chr2	+	3525	8	NNC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	-10	2395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.8074368734422	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATACAGTATGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	22959068	22986814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22959297_22959462_22959632_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980491_22980595_22984310
ES.18468.21	chr2	+	3372	11	NIC	ENSMUSG00000026781.18	novel	4804	14	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	43.4774654275062	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22959076	23004516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22959297_22959462_22959632_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.22	chr2	+	2144	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	-3	1584	-2	24	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATTTTTTAAAAATGAGG	NA	False	NA	NA	False	ATTAAA	-26	NA	22959076	23002941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.23	chr2	+	3701	13	NNC	ENSMUSG00000026781.18	novel	4804	14	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	35.236896697764	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAATGCTAACTGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	22959080	23004517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000274_23000299_23000665_23000776_23002516
ES.18468.24	chr2	+	3404	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	4	317	0	-219	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGATGGCTTTTTTC	NA	False	NA	NA	False	TTTAAA	-21	NA	22959083	23004208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.25	chr2	+	4767	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	8	-1050	4	5	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	22959087	23005575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.26	chr2	+	3585	12	NIC	ENSMUSG00000026781.18	novel	3725	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.0854918098235	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22959095	23004522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22959297_22959462_22959632_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.27	chr2	+	3611	13	NNC	ENSMUSG00000026781.18	novel	3725	13	NA	NA	94	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.9986723596999	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAAATGCTAACTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	22959177	23004516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989583_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.29	chr2	+	3632	12	ISM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	259	0	0	0	3prime_fragment	FALSE	canonical	3	49	junction_8	20.3972936140278	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959338	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.30	chr2	+	3358	11	NIC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	33.0454232837166	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959386	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.31	chr2	+	3464	11	NIC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	34.8889667373512	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959388	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22959632_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.32	chr2	+	3311	11	ISM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	6421	29	-4238	-26	3prime_fragment	FALSE	canonical	3	49	junction_7	21.2424104093674	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAGGTTAATGA	NA	False	NA	NA	False	NA	NA	NA	22965500	23004496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.33	chr2	+	3140	9	ISM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	11269	7	-308	-4	3prime_fragment	FALSE	canonical	3	49	junction_5	23.5571114528076	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATGCTAACTGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	22970348	23004518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.34	chr2	+	6590	6	NIC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	-4596	0	intron_retention	FALSE	canonical	3	42	junction_2	27.5564874394397	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	8490	False	NA	NA	False	AATAAA	-20	NA	22979616	23004525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22979801_22980487_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.4	chr2	+	4683	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	-42	-2655	-8	2	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTGCCTTTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	22958170	23005572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.5	chr2	+	3327	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	28	275	-5	-177	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATAACCAGTGTGAT	NA	False	NA	NA	False	TATAAA	-14	NA	22958207	23004250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.6	chr2	+	3785	14	NIC	ENSMUSG00000026781.18	novel	3630	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	39.5263375605019	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22958207	23004522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_22958299_22958891_22959078_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18468.7	chr2	+	2427	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	28	1175	-5	-7	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGCATGATAATCCT	NA	False	NA	NA	False	AATAAA	-34	NA	22958207	23003350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ES.18469.1	chr2	+	261	1	Intergenic	novelGene_15357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	23011367	23011628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_23011400_23011600
ES.1847.1	chr1	-	4356	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-12	-2033	-12	2033	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	170002538	169967473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ES.1847.10	chr1	-	3703	8	ISM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	11398	65	-1608	0	3prime_fragment	FALSE	canonical	3	102	junction_2	74.0625769611242	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	False	NA	-5	True	AATAAA	-15	NA	169991128	169969571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935
ES.1847.11	chr1	-	7962	10	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	23	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	97.8127462723204	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTTGTTTCTACCT	NA	False	NA	-7	True	AATAAA	-13	NA	170002492	169969573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169972711_169972765_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ES.1847.12	chr1	-	2342	11	NIC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	128.937038898836	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTTGTTTCTACCT	NA	False	NA	-7	True	AATAAA	-13	NA	170002533	169969573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_169997463_169997555_170002318
ES.1847.13	chr1	-	2369	13	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	129.636993177102	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTTGTTTCTACCT	NA	False	NA	-7	True	AATAAA	-13	NA	170002443	169969573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_169997463_169997555_170000976_170001043_170002318
ES.1847.14	chr1	-	2171	11	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	105.933044891573	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTTGTTTCTACCT	NA	False	NA	-7	True	AATAAA	-13	NA	170002533	169969573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318_170002402_170002481
ES.1847.16	chr1	-	1916	10	NIC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	-19	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	99.6164248443269	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTGCCTTGTTTCT	NA	False	NA	-11	True	AATAAA	-9	NA	170002474	169969577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_170002318
ES.1847.2	chr1	-	4261	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-21	-1929	-21	1929	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGAGAAATCTCAGT	NA	False	NA	NA	False	NA	NA	NA	170002547	169967577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ES.1847.3	chr1	-	2299	10	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	396	650	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	99.6164248443269	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACGTGAATCTTCAATG	NA	False	NA	NA	False	AAAAAG	-5	NA	169989124	169968856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169969079_169969244_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935
ES.1847.5	chr1	-	2272	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	-22	61	-22	3	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTTCTACCTTAAGAA	NA	False	NA	-1	True	AATAAA	-19	NA	170002548	169969567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ES.1847.6	chr1	-	2510	12	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	117.528684734992	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTACCTTAAG	NA	False	NA	-3	True	AATAAA	-17	NA	170002485	169969569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_169997463_169997716_170002318
ES.1847.7	chr1	-	3633	11	NNC	ENSMUSG00000026670.16	novel	2287	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	110.926822725615	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002522	169969570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170000976
ES.1847.8	chr1	-	2326	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	-40	1	-29	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	False	NA	-5	True	AATAAA	-15	NA	170002555	169969571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ES.1847.9	chr1	-	2283	11	NNC	ENSMUSG00000026670.16	novel	2283	11	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	111.580867535613	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	False	NA	-5	True	AATAAA	-15	NA	170002162	169969571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170001965
ES.18470.1	chr2	+	3622	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	-392	1477	-392	-1477	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTTCTCTGTCGCCTT	6681	False	NA	NA	False	AATGAA	-27	NA	23045988	23087795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.10	chr2	+	3326	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	139	1242	-10	-1242	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACCTTTTTTAAT	7212	False	NA	67	True	ATTAAA	-36	NA	23046519	23088030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.11	chr2	+	3942	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-5	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.943094592173	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTGAGTTTAGTTGGT	7217	False	NA	8	True	AGTAAA	-21	NA	23046524	23088563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23053988_23054077_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.12	chr2	+	3820	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-5	-715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	187.97721164749	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGCTTTTGAGTTTA	7217	False	NA	2	True	AGTAAA	-15	NA	23046524	23088557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084813_23085353_23085421_23086899
ES.18470.13	chr2	+	2476	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-4	1948	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	194.122138985461	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAGAAAGACATTGAAA	7218	False	NA	0	True	AATAAA	-12	NA	23046525	23087270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.15	chr2	+	2547	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-2	1965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	188.293842139498	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTCAATCAATCATG	7220	False	NA	17	True	AATAAA	-29	NA	23046527	23087287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084628_23084746_23084821_23085333_23085421_23086899
ES.18470.16	chr2	+	4524	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-2	-1303	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	186.498808456128	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATGTTCATGGTCCTT	7220	False	NA	6	True	ATTAAA	-19	NA	23046527	23087969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.17	chr2	+	4559	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	147	1	-2	-1	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACATTCCAACTGAAGCA	7220	False	NA	23	True	AATAAA	-25	NA	23046527	23089271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.18	chr2	+	3424	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	147	1136	-2	-1136	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTTCACTGCTTTTT	7220	False	NA	NA	False	NA	NA	NA	23046527	23088136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.20	chr2	+	2851	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-2	-1646	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	193.230665178687	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCATGTATGCCCATTT	7220	False	NA	11	True	ATTAAA	-3	NA	23046527	23087626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.21	chr2	+	4277	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-1	-1549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	186.498808456128	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATATCTGTATAATT	7221	False	NA	108	True	AGTAAA	-15	NA	23046528	23087723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.22	chr2	+	2784	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-1	-1643	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	192.176965735151	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTATGCCCATTTTTT	7221	False	NA	14	True	ATTAAA	-6	NA	23046528	23087629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.23	chr2	+	2895	18	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-1	-1477	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	194.382920348428	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTTCTCTGTCGCCTT	7221	False	NA	NA	False	AATGAA	-27	NA	23046528	23087795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046689_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.24	chr2	+	3707	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-1	-753	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAATCCCAGTCTCAG	7221	False	NA	-36	True	CATAAA	-25	NA	23046528	23088519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.25	chr2	+	3837	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-1	-710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	251.535831823933	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTGAGTTTAGTTGG	7221	False	NA	7	True	AGTAAA	-20	NA	23046528	23088562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052518_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073230_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.26	chr2	+	2382	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	148	2177	-1	1773	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGCAACATTTTTC	7221	False	NA	14	True	AATATA	-14	NA	23046528	23087095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.28	chr2	+	4280	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	278	0	-278	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGGGTGCATCATTC	7222	False	NA	NA	False	NA	NA	NA	23046529	23088994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.29	chr2	+	3640	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	1765	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	186.498808456128	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGTCTCCTTTGCAA	7222	False	NA	6	True	AATATA	-6	NA	23046529	23087087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.3	chr2	+	3054	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	-254	1907	-254	-1907	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTGGTAAGGTTTTT	6819	False	NA	95	True	AGTAAA	-12	NA	23046126	23087365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.30	chr2	+	2384	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	1763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.076081258707	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGCAGTCTCCTTTGC	7222	False	NA	4	True	AATATA	-4	NA	23046529	23087085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054497_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.31	chr2	+	2420	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	1965	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	195.228142647675	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTCAATCAATCATG	7222	False	NA	17	True	AATAAA	-29	NA	23046529	23087287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.32	chr2	+	4447	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	-12	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATATTTTATCACATTC	7222	False	NA	12	True	AATAAA	-14	NA	23046529	23089260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.33	chr2	+	3612	18	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	-759	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	194.382920348428	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAAATTGAATCCCAG	7222	False	NA	31	True	CATAAA	-19	NA	23046529	23088513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046689_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.34	chr2	+	2491	15	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	1	-1622	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	212.612611218102	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTACTATCTCACTGA	7223	False	NA	35	True	ATTAAA	-27	NA	23046530	23087650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.35	chr2	+	2829	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1643	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	194.122138985461	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTATGCCCATTTTTT	7224	False	NA	14	True	ATTAAA	-6	NA	23046531	23087629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.36	chr2	+	2840	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	151	1716	2	-1716	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAACTATTTGAATT	7224	False	NA	-59	True	NA	NA	NA	23046531	23087556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.37	chr2	+	3561	18	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1518	intron_retention	FALSE	non_canonical	0	0	junction_15	193.743989749395	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATCAAAATGAAACCAA	7224	False	NA	139	True	NA	NA	NA	23046531	23087754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23083252_23084528_23084654_23084746_23084821_23085333_23085421_23086899
ES.18470.38	chr2	+	2546	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	1951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	189.089893051747	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGACATTGAAAAAT	7224	False	NA	3	True	AATAAA	-15	NA	23046531	23087273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054599_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.39	chr2	+	3096	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1551	intron_retention	FALSE	canonical	3	665	junction_5	65.5250817029627	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAATATCTGTATAA	7224	False	NA	106	True	AGTAAA	-13	NA	23046531	23087721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084821_23085333_23085421_23086899
ES.18470.4	chr2	+	3299	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	-193	1601	-193	-1601	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTTTCAGAACAAC	6880	False	NA	56	True	NA	NA	NA	23046187	23087671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.40	chr2	+	4850	6	ISM	ENSMUSG00000026775.10	ENSMUST00000125004.8	2769	7	2	-21	2	21	intron_retention	FALSE	canonical	3	665	junction_5	56.8774120367655	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAAAAGCAAAGTCCAAA	7224	False	NA	NA	False	NA	NA	NA	23046531	23067101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967
ES.18470.43	chr2	+	2490	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1967	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGAAAGCAAGCAATCAT	7224	False	NA	35	True	ATTAAA	-30	NA	23046531	23087305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.44	chr2	+	2963	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1494	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTCCTTTCAAAAATGA	7224	False	NA	NA	False	AATGAA	-10	NA	23046531	23087778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.45	chr2	+	2508	16	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1654	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	204.211480795985	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAATGCAGCATGTAT	7224	False	NA	3	True	TTTAAA	-13	NA	23046531	23087618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.46	chr2	+	2998	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.943094592173	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCATGTATGCCCATTT	7224	False	NA	11	True	ATTAAA	-3	NA	23046531	23087626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23053988_23054077_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.47	chr2	+	3011	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1490	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	181.204074641457	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTCAAAAATGATCTT	7224	False	NA	NA	False	AATGAA	-14	NA	23046531	23087782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046689_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.48	chr2	+	3549	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1542	intron_retention	FALSE	canonical	3	665	junction_5	67.6103736845004	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTATAATTACATTGA	7224	False	NA	115	True	AGTAAA	-22	NA	23046531	23087730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.49	chr2	+	3362	15	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-750	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	212.612611218102	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCCCAGTCTCAGTAA	7224	False	NA	-33	True	CATAAA	-28	NA	23046531	23088522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.5	chr2	+	2509	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-10	1951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	188.085620442616	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGACATTGAAAAAT	7212	False	NA	3	True	AATAAA	-15	NA	23046519	23087273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23076979_23077819_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.50	chr2	+	3007	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	2	-1646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	246.445950764462	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCATGTATGCCCATTT	7224	False	NA	11	True	ATTAAA	-3	NA	23046531	23087626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23048181_23048279_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.51	chr2	+	3667	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	153	887	4	-887	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTAGGTTTTAGGACAA	7226	False	NA	-97	True	TTTAAA	-15	NA	23046533	23088385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.52	chr2	+	3684	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	5	-759	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	185.043155855832	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAAATTGAATCCCAG	7227	False	NA	31	True	CATAAA	-19	NA	23046534	23088513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899_23087256_23087365
ES.18470.54	chr2	+	3833	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	18	-1964	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	186.498808456128	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAAGCAATCATTTT	7250	False	NA	38	True	ATTAAA	-33	NA	23046557	23087308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.55	chr2	+	3015	22	Fusion	ENSMUSG00000026775.10_ENSMUSG00000081648.2	novel	4707	19	NA	NA	20	32655	multi-exon	FALSE	non_canonical	0	0	junction_19	278.813236525237	722	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAGAGCAAAAAAAAGAA	7252	False	NA	NA	False	NA	NA	NA	23046559	23126350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899_23087638_23092715_23092747_23120633_23120685_23126310
ES.18470.56	chr2	+	3072	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	20	-1544	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.943094592173	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCTGTATAATTACATT	7252	False	NA	113	True	AGTAAA	-20	NA	23046559	23087728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23053988_23054077_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.57	chr2	+	1492	7	FSM	ENSMUSG00000026775.10	ENSMUST00000125004.8	2769	7	33	1244	23	-1244	multi-exon	FALSE	canonical	3	665	junction_5	58.3430944214195	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTTTTCTTTGAAAC	7255	False	NA	NA	False	ATTAAA	-15	NA	23046562	23065836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180
ES.18470.59	chr2	+	3216	20	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	42	62590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	185.043155855832	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTGAGAGTTGTTAC	7274	False	NA	NA	False	NA	NA	NA	23046581	23151862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899_23087960_23151839
ES.18470.6	chr2	+	3933	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	139	635	-10	-635	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGCTGGAGAATTTTC	7212	False	NA	82	True	NA	NA	NA	23046519	23088637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.60	chr2	+	4551	19	NIC	ENSMUSG00000026775.10	novel	563	4	NA	NA	-28	-9	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	186.556581295572	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTATCACATTCCAA	7509	False	NA	15	True	AATAAA	-17	NA	23046816	23089263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23047033_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.61	chr2	+	2562	19	NIC	ENSMUSG00000026775.10	novel	563	4	NA	NA	-6	1974	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	186.556581295572	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATCATGTTGAAAGCA	7531	False	NA	26	True	AATAAA	-38	NA	23046838	23087296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23047033_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.62	chr2	+	2035	17	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	6130	2179	5666	1771	3prime_fragment	FALSE	canonical	3	665	junction_3	69.3107810877933	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCTTTGCAACATTTT	NA	False	NA	12	True	AATATA	-12	NA	23052510	23087093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.63	chr2	+	4212	17	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	6131	1	5667	-1	3prime_fragment	FALSE	canonical	3	665	junction_3	69.3107810877933	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACATTCCAACTGAAGCA	NA	False	NA	23	True	AATAAA	-25	NA	23052511	23089271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.64	chr2	+	4066	16	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	5715	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	199.683972538832	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATATTTTATCACATTC	NA	False	NA	12	True	AATAAA	-14	NA	23052559	23089260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23086899
ES.18470.65	chr2	+	2640	17	NNC	ENSMUSG00000026775.10	novel	869	3	NA	NA	-4522	-1622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.578061097793	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTACTATCTCACTGA	NA	False	NA	35	True	ATTAAA	-27	NA	23053863	23087650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23054077_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.66	chr2	+	3793	14	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	4598	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	293.747828897932	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTTTATCACATTCC	NA	False	NA	13	True	AATAAA	-15	NA	23062983	23089261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23063103_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081134_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.67	chr2	+	2791	11	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-9862	1951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	242.300412711163	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGACATTGAAAAAT	3775	False	NA	3	True	AATAAA	-15	NA	23073223	23087273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.68	chr2	+	4212	7	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-5470	-1653	intron_retention	FALSE	non_canonical	0	0	junction_6	299.03200311821	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGCAGCATGTATG	8167	False	NA	4	True	TTTAAA	-14	NA	23077615	23087619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23077855_23081024_23081138_23082418_23082575_23083099_23084656_23084746_23084821_23085333_23086599_23086810
ES.18470.69	chr2	+	2505	3	ISM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	38231	1552	1526	-1552	intron_retention	FALSE	canonical	3	845	junction_1	4.5	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGAATATCTGTATA	NA	False	NA	105	True	AGTAAA	-12	NA	23084611	23087720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_23084656_23084746_23084821_23085333
ES.18470.70	chr2	+	3524	1	Genic_Genomic	ENSMUSG00000026775.10_ENSMUSG00000081648.2	novel	NA	NA	NA	NA	-2824	-951	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGGAAAAAACTAAAACACC	NA	False	NA	NA	False	NA	NA	NA	23089220	23092744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_23089200_23092700
ES.18470.8	chr2	+	4484	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	194.122138985461	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCCAACTGAAGCAT	7212	False	NA	24	True	AATAAA	-26	NA	23046519	23089272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18470.9	chr2	+	4536	19	NNC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	190.029529868971	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTATCACATTCCAA	7212	False	NA	15	True	AATAAA	-17	NA	23046519	23089263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081115_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ES.18471.1	chr2	-	8191	1	Antisense	novelGene_ENSMUSG00000026781.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGAAAAACACAATACAAGG	NA	False	NA	NA	False	NA	NA	NA	23005473	22997282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_22997300_23005500
ES.18471.10	chr2	-	5187	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-29	-179	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	40.4942603830091	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGAGTTTCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	23045938	23005796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045816
ES.18471.11	chr2	-	5309	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	95	186	-32	-186	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTCTTAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	23045941	23005803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.12	chr2	-	5420	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	4	-187	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	52.4141493831156	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTATTTCTTAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	23045905	23005804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23045690
ES.18471.13	chr2	-	5130	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-9	-196	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	38.6118638899737	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCATAGGACTTATTTC	NA	False	NA	NA	False	NA	NA	NA	23045918	23005813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045836
ES.18471.14	chr2	-	4804	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	112	674	-15	-674	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTGGCATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	23045924	23006291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.16	chr2	-	4582	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	76	932	-51	-932	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTTGTTTCTTTGTG	NA	False	NA	NA	False	AAAAAG	-39	NA	23045960	23006549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.17	chr2	-	4648	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-29	-938	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.1349743987235	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGCAGTGTTGTTTC	NA	False	NA	NA	False	AAAAAG	-33	NA	23045938	23006555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23044034_23044129_23045690
ES.18471.18	chr2	-	4419	14	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-47	-939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.5352773823175	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCAGCAGTGTTGTTT	NA	False	NA	NA	False	AAAAAG	-32	NA	23045956	23006556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23006768_23006849_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23044952_23045029_23045836
ES.18471.2	chr2	-	7078	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	141	-1629	14	1629	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGGACAAAGAAATTAT	NA	False	NA	NA	False	AATAAA	-26	NA	23045895	23003988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.20	chr2	-	6469	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-50	-939	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.1203253795281	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCAGCAGTGTTGTTT	NA	False	NA	NA	False	AAAAAG	-32	NA	23045959	23006556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23043943
ES.18471.21	chr2	-	3521	3	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	33761	939	33634	-939	3prime_fragment	FALSE	canonical	3	112	junction_2	7.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCAGCAGTGTTGTTT	9352	False	NA	NA	False	AAAAAG	-32	NA	23012275	23006556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_23008605_23010468_23010571_23010904
ES.18471.22	chr2	-	3106	9	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-2	-940	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	50.2430032442329	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCAGCAGTGTTGTT	NA	False	NA	NA	False	AAAAAG	-31	NA	23045911	23006557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23008605_23010468_23010571_23010904_23011019_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.23	chr2	-	7690	11	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-29	-941	intron_retention	FALSE	canonical	3	112	junction_2	17.5487891320171	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTGCAGCAGTGTTGT	NA	False	NA	NA	False	AAAAAG	-30	NA	23045938	23006558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.24	chr2	-	4507	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-57	-943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.1349743987235	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACATTGCAGCAGTGTT	NA	False	NA	NA	False	AAAAAG	-28	NA	23045966	23006560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23044952_23045029_23045836
ES.18471.25	chr2	-	4384	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	6	-945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.0050502688911	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTACATTGCAGCAGTG	NA	False	NA	NA	False	AAAAAG	-26	NA	23045903	23006562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023742_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045816
ES.18471.26	chr2	-	4436	11	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-35	-948	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.7274534606947	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCCTACATTGCAGCA	NA	False	NA	NA	False	AAAAAG	-23	NA	23045944	23006565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.27	chr2	-	4434	11	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-57	-948	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	42.2781267323896	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCCTACATTGCAGCA	NA	False	NA	NA	False	AAAAAG	-23	NA	23045966	23006565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23045690
ES.18471.29	chr2	-	4008	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	16	1566	16	-1566	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCTAAATGATTGTAG	NA	False	NA	NA	False	AAAAAG	-15	NA	23046020	23007183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.3	chr2	-	6680	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	28	1299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.4936504096765	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGTTGCCCTTAGGA	NA	False	NA	NA	False	TATAAA	-21	NA	23045881	23004318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23044952_23045029_23045820
ES.18471.30	chr2	-	3801	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	117	1672	-10	-1672	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGACTCACTTTCAG	NA	False	NA	NA	False	AATATA	-14	NA	23045919	23007289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.31	chr2	-	3416	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-10	-1927	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_11	38.6118638899737	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTTGAGACTTTCAATAT	NA	False	NA	NA	False	ATTAAA	-27	NA	23045919	23007544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045820
ES.18471.32	chr2	-	3518	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	145	1927	18	-1927	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTTGAGACTTTCAATAT	NA	False	NA	NA	False	ATTAAA	-27	NA	23045891	23007544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.33	chr2	-	4026	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	5	-1932	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.833784827828	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTAGTTGAGACTTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	23045904	23007549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038958_23039459_23040999_23041138_23045690
ES.18471.34	chr2	-	3097	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	4	-2510	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	52.4141493831156	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTATCTGCTGATTTTA	NA	False	NA	0	True	AATAAA	-45	NA	23045905	23008127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23045690
ES.18471.35	chr2	-	3118	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	-40	2512	-40	-2512	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTATCTGCTGATTT	NA	False	NA	-2	True	AATAAA	-43	NA	23046076	23008129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.36	chr2	-	2915	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	4	-2519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.402055486383	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGCTTATCTTTATCTG	NA	False	NA	-9	True	AATAAA	-36	NA	23045905	23008136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23045690
ES.18471.37	chr2	-	2846	11	NIC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-28	-2531	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.7274534606947	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAGTGAGCCGTAAGCT	NA	False	NA	-21	True	AATAAA	-24	NA	23045937	23008148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.38	chr2	-	2951	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-9	-2537	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	43.4758411112491	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAGGGAGTGAGCCG	NA	False	NA	-27	True	AATAAA	-18	NA	23045918	23008154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035359_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.39	chr2	-	2858	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	76	2656	-51	-2656	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGTAATTAATCTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	23045960	23008273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.4	chr2	-	6698	13	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	29	1177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.5937013053907	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCTAAAATGAGGTTCA	NA	False	NA	NA	False	AATAAA	-38	NA	23045880	23004440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022111_23022199_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.40	chr2	-	2631	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-33	-2719	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	38.6118638899737	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAACAGCTTTTAATTAC	NA	False	NA	NA	False	GATAAA	-19	NA	23045942	23008336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045836
ES.18471.41	chr2	-	3519	10	NNC	ENSMUSG00000026779.7	novel	1201	7	NA	NA	-29	-9374	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	46.3896540189728	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTCTTAAATCAGTGTT	NA	False	NA	NA	False	ATTAAA	-28	NA	23045938	23014991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23016222_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.42	chr2	-	3614	10	NNC	ENSMUSG00000026779.7	novel	1201	7	NA	NA	-48	-9378	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	46.3896540189728	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTGTCTTAAATCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	23045957	23014995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23016302_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.43	chr2	-	2393	8	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	166	16708	39	4370	5prime_fragment	FALSE	canonical	3	123	junction_1	15.828158839388	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGGTTGGTGTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	23045870	23022325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.44	chr2	-	2506	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-28	-1277	-28	1277	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAGATGTCATTAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	23045937	23025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.45	chr2	-	1297	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	-15	-81	-15	81	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACTTTTTCATTTCCTT	NA	False	NA	NA	False	AGTAAA	-24	NA	23045924	23026614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.46	chr2	-	3996	2	ISM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	6	10659	6	-10659	5prime_fragment	FALSE	canonical	3	173	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTTTTGTGGTCTAG	NA	False	NA	NA	False	AAAACA	-45	NA	23045903	23037354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_23041138_23045690
ES.18471.5	chr2	-	6525	12	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	-44	1164	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	38.6118638899737	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATAGCTGTCGATTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	23045953	23004453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045836
ES.18471.6	chr2	-	6659	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	95	-1164	-32	1164	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATAGCTGTCGATTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	23045941	23004453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ES.18471.7	chr2	-	5524	11	NNC	ENSMUSG00000026779.7	novel	5590	12	NA	NA	3	1162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	65.5308324378685	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATAGCTGTCGATTT	NA	False	NA	NA	False	AATAAA	-23	NA	23045906	23004455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23008605_23010468_23010571_23010904_23011019_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23038196_23038345_23040999_23041138_23045690
ES.18471.8	chr2	-	6058	3	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	33320	-1157	33193	1157	3prime_fragment	FALSE	canonical	3	112	junction_2	7.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACCATAGCTGTC	8911	False	NA	NA	False	AATAAA	-18	NA	23012716	23004460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_23008605_23010468_23010571_23010904
ES.18471.9	chr2	-	9740	8	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	11713	-1157	11586	1157	3prime_fragment	FALSE	canonical	3	112	junction_2	15.3702601786432	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACCATAGCTGTC	5866	False	NA	NA	False	AATAAA	-18	NA	23034323	23004460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510
ES.18472.1	chr2	-	185	1	Intergenic	novelGene_15358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATGACTAATTA	919	False	NA	NA	False	NA	NA	NA	23154975	23154790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_23154800_23155000
ES.18473.1	chr2	+	2523	3	NNC	ENSMUSG00000069132.4	novel	2579	2	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATAACTTTTGGTAGTT	3930	False	NA	NA	False	AATAAA	-17	NA	23211411	23291985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_23211552_23252279_23252378_23289700
ES.18474.1	chr2	-	6579	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	20	-4	-6	4	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGCTTGGATTTATT	NA	False	NA	2	True	AATAAA	-26	NA	23462096	23396227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.10	chr2	-	6579	12	NIC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	14.5431816405973	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTAATTTTCTTGCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	23462078	23396235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434839_23435164_23435287_23435455_23435592_23461854
ES.18474.11	chr2	-	6503	11	FSM	ENSMUSG00000026771.15	ENSMUST00000028110.11	2078	11	16	-4441	16	-11	multi-exon	FALSE	canonical	2	5	junction_10	13.1833227981416	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCAGAATTAATTTTC	NA	False	NA	-13	True	AATAAA	-11	NA	23462074	23396242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23461854
ES.18474.12	chr2	-	5320	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	27	1248	1	-1248	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATGTGGTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	23462089	23397479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.13	chr2	-	5414	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-99	-3799	1	-1251	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGAAATGTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	23462089	23397482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.14	chr2	-	4854	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	20	1721	-6	-1721	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTGTTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	23462096	23397952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.15	chr2	-	4255	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	73	2267	47	2185	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCAGTTTTGATTC	NA	False	NA	NA	False	NA	NA	NA	23462043	23398498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.16	chr2	-	2831	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-99	-1216	1	618	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTAGTTGATCACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	23462089	23400065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.17	chr2	-	2959	13	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	1	618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.2210011841375	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTAGTTGATCACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	23462089	23400065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23409852_23409942_23410810_23410947_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.18	chr2	-	2741	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	20	3834	-6	618	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTAGTTGATCACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	23462096	23400065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.19	chr2	-	2631	11	NNC	ENSMUSG00000026771.15	novel	6595	11	NA	NA	1	617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.2777616161531	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATTAGTTGATCACTC	NA	False	NA	NA	False	AATAAA	-14	NA	23462089	23400066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433235_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.2	chr2	-	6493	11	NIC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	-46	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	14.6659469520382	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGCTTGGATTTAT	NA	False	NA	1	True	AATAAA	-25	NA	23462036	23396228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435455_23435592_23461854
ES.18474.21	chr2	-	2596	10	NIC	ENSMUSG00000026771.15	novel	6595	11	NA	NA	1	616	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	13.9717528085495	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATTAGTTGATCACT	NA	False	NA	NA	False	AATAAA	-13	NA	23462089	23400067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23461854
ES.18474.22	chr2	-	2294	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-107	-671	-7	73	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGACTTACATTTGAAA	NA	False	NA	NA	False	AATAAA	-35	NA	23462097	23400610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.23	chr2	-	2258	12	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	0	53	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	18.1121392103986	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATGTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	23462090	23400630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23452979_23453068_23461854
ES.18474.24	chr2	-	2095	11	NIC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	-6	53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	15.1723432600241	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATGTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	23462096	23400630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.3	chr2	-	5564	4	NNC	ENSMUSG00000026771.15	novel	6595	11	NA	NA	-67	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.1661358757205	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTGCTTGGATTTA	NA	False	NA	0	True	AATAAA	-24	NA	23405302	23396229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23404296_23404421_23405016_23405071_23405159
ES.18474.4	chr2	-	6592	12	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	14.0341967239294	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTCTTGCTTGGATT	NA	False	NA	-2	True	AATAAA	-22	NA	23462083	23396231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407897_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.5	chr2	-	6664	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-100	-5048	0	-2	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAATTTTCTTGCTTGGA	NA	False	NA	-4	True	AATAAA	-20	NA	23462090	23396233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.6	chr2	-	6779	12	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	17.7577826029943	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAATTTTCTTGCTTGGA	NA	False	NA	-4	True	AATAAA	-20	NA	23462089	23396233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23441920_23442134_23461854
ES.18474.7	chr2	-	6572	12	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	13.8420845895813	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAATTTTCTTGCTTGGA	NA	False	NA	-4	True	AATAAA	-20	NA	23462089	23396233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405212_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18474.8	chr2	-	6352	10	NNC	ENSMUSG00000026771.15	novel	6595	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.9234977060822	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTAATTTTCTTGCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	23462090	23396235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405212_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435455_23435592_23461854
ES.18474.9	chr2	-	6641	12	NNC	ENSMUSG00000026771.15	novel	1516	12	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6175070900466	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTAATTTTCTTGCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	23462077	23396235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23409852_23409942_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ES.18475.1	chr2	+	177	1	Intergenic	novelGene_15359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGATTCTATCAAA	NA	False	NA	NA	False	NA	NA	NA	23479063	23479240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_23479100_23479200
ES.18476.1	chr2	+	201	1	Intergenic	novelGene_15360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCGGATGTTATAACTAAC	NA	False	NA	NA	False	AAAACA	-11	NA	24066607	24066808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24066600_24066800
ES.18477.1	chr2	+	3899	6	NNC	ENSMUSG00000044103.5	novel	1648	5	NA	NA	-125	8064	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1.93907194296653	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTTGCCAATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	24076362	24091644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24076561_24077170_24077314_24077712_24077821_24078633_24078774_24082598_24083298_24089033
ES.18477.2	chr2	+	3817	6	NNC	ENSMUSG00000044103.5	novel	1648	5	NA	NA	-69	8059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.31516738055805	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGTTTCTTGCCAA	NA	False	NA	NA	False	AATAAA	-10	NA	24076418	24091639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24076540_24077170_24077314_24077712_24077821_24078633_24078774_24082598_24083298_24089033
ES.18477.3	chr2	+	1397	6	NNC	ENSMUSG00000044103.5	novel	1648	5	NA	NA	-39	5646	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1.93907194296653	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTTTTAAAGTTCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	24076448	24089226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24076561_24077170_24077314_24077712_24077821_24078633_24078774_24082598_24083298_24089031
ES.18478.1	chr2	+	6944	18	NNC	ENSMUSG00000026979.17	novel	4181	17	NA	NA	-527	-168	intron_retention	FALSE	canonical	0	0	junction_17	7.06470343341291	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGGTGAGTGTGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	24274816	24298573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24276532_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296285
ES.18478.10	chr2	+	5463	16	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1	1736	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAACAAAGTATAAAGC	NA	False	NA	NA	False	AGTAAA	-4	NA	24275345	24300477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24275475_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.11	chr2	+	3738	16	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTTTTCATCCACTTA	NA	False	NA	NA	False	NA	NA	NA	24275345	24298752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24275475_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.12	chr2	+	4823	19	NNC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.87835215695313	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGGTGAGTGTGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	24275345	24298573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24275475_24275768_24275937_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.13	chr2	+	3899	20	NNC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	0	471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.23449722776256	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGCTCCACTTGCGGA	NA	False	NA	NA	False	NA	NA	NA	24275347	24297490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24275475_24275768_24275937_24276370_24276532_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.14	chr2	+	4571	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	10	167	6	-167	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGGTGAGTGTGAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	24275353	24298574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.15	chr2	+	3750	11	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1403	-169	intron_retention	FALSE	canonical	3	11	junction_9	3.76828873628335	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTGGGTGAGTGTGAG	2563	False	NA	NA	False	AATAAA	-13	NA	24289644	24298572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24290613_24291025_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.2	chr2	+	5115	18	NNC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-204	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.78284014371745	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGAGTGTGAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	24275139	24298575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296285_24296615_24296988
ES.18478.3	chr2	+	4763	19	NNC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-55	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.15610763915761	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGAGTGTGAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	24275288	24298575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24275475_24276644_24276722_24278132_24278182_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.4	chr2	+	4000	19	NNC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-10	474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.65216018883266	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCACTTGCGGAATT	NA	False	NA	NA	False	NA	NA	NA	24275333	24297493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24275475_24276370_24276532_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296285_24296615_24296988
ES.18478.5	chr2	+	5016	19	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-4	26	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.87835215695313	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGTGTTTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	24275339	24298767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24275475_24276370_24276532_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.6	chr2	+	4841	18	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	1	17	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.25413358117742	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATCCACTTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	24275344	24298758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24275475_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.7	chr2	+	4759	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	1	-12	1	12	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTCATCCACTTAC	NA	False	NA	NA	False	NA	NA	NA	24275344	24298753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.8	chr2	+	3499	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	1	1248	1	474	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCACTTGCGGAATT	NA	False	NA	NA	False	NA	NA	NA	24275344	24297493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18478.9	chr2	+	5424	19	NIC	ENSMUSG00000026979.17	novel	4748	17	NA	NA	-1	440	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.87835215695313	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTTAAATCTGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	24275345	24299181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24275475_24276370_24276532_24276644_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ES.18479.1	chr2	+	177	1	Intergenic	novelGene_15361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	24637725	24637902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24637700_24637900
ES.1848.1	chr1	+	7179	2	Antisense	novelGene_ENSMUSG00000026667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAATCCAGTTGGGTGG	NA	False	NA	NA	False	NA	NA	NA	170032599	170040791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170038791_170039803
ES.1848.2	chr1	+	4118	2	Antisense	novelGene_ENSMUSG00000026667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAATCCAGTTGGGTGG	NA	False	NA	NA	False	NA	NA	NA	170035491	170040791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170038883_170040064
ES.1848.3	chr1	+	3498	2	Antisense	novelGene_ENSMUSG00000026667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTAATCCAGTTGGGTGG	NA	False	NA	NA	False	NA	NA	NA	170035491	170040791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170038873_170040674
ES.18480.1	chr2	-	5558	29	NNC	ENSMUSG00000004113.19	novel	9736	47	NA	NA	7669	25	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.74489050004373	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGTGTGTCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	24568211	24493873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24494604_24495714_24497113_24497453_24497699_24497953_24498159_24499854_24499972_24500122_24500259_24506830_24506959_24507685_24507799_24508266_24508375_24512610_24512720_24515249_24515347_24521910_24522039_24525107_24525253_24527437_24527530_24528683_24528750_24529105_24529223_24538486_24538575_24538908_24539020_24540005_24540171_24540438_24540641_24541092_24541231_24542915_24543077_24544395_24544493_24547302_24547410_24548502_24548563_24548876_24549007_24551765_24551893_24567833_24568052_24568191
ES.18480.2	chr2	-	3619	3	ISM	ENSMUSG00000004113.19	ENSMUST00000102939.9	9736	47	155016	5	-579	-5	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATCAAAACCCAGGAT	NA	False	NA	NA	False	TATAAA	-42	NA	24498125	24493910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_24497113_24497453_24497699_24497953
ES.18480.3	chr2	-	3709	2	NIC	ENSMUSG00000004113.19	novel	9655	46	NA	NA	-566	-243	intron_retention	FALSE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTGTCGCAAAAATTT	NA	False	NA	NA	False	TATAAA	-4	NA	24498112	24494148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24497699_24497953
ES.18480.4	chr2	-	3396	3	ISM	ENSMUSG00000004113.19	ENSMUST00000102939.9	9736	47	155001	243	-594	-243	3prime_fragment	FALSE	canonical	2	6	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTGTCGCAAAAATTT	NA	False	NA	NA	False	TATAAA	-4	NA	24498140	24494148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_24497113_24497453_24497699_24497953
ES.18480.7	chr2	-	7296	46	NNC	ENSMUSG00000004113.19	novel	6987	47	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.48473716342134	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTTCTCTCTATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	24653197	24496387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24497113_24497453_24497699_24497953_24498159_24499854_24499972_24500122_24500259_24506830_24506959_24507685_24507799_24508266_24508375_24512610_24512720_24521910_24522039_24525107_24525253_24527437_24527530_24528683_24528750_24529105_24529223_24529915_24529998_24538486_24538575_24538908_24539020_24540005_24540171_24540438_24540641_24541092_24541231_24542915_24543077_24544395_24544493_24547302_24547410_24548502_24548563_24548876_24549007_24551765_24551893_24567833_24568052_24568887_24569656_24575779_24575887_24577711_24577780_24580752_24580871_24587286_24587360_24587584_24587717_24589937_24590051_24592519_24592633_24596146_24596357_24608041_24608135_24609056_24609114_24609952_24610069_24611319_24611424_24620682_24620874_24622207_24622361_24623956_24624049_24648293_24648434_24651787_24651894_24652775
ES.18481.1	chr2	+	5548	1	Intergenic	novelGene_15362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTCGGAGTCCACGAA	NA	False	NA	NA	False	NA	NA	NA	24719075	24724623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24719100_24724600
ES.18482.1	chr2	+	3384	3	Antisense	novelGene_ENSMUSG00000036893.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCTGGGATCTGACTAG	NA	False	NA	NA	False	NA	NA	NA	24727518	24738945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_24729768_24730646_24730792_24737955
ES.18482.2	chr2	+	4981	1	Antisense	novelGene_ENSMUSG00000036893.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTCCATGTATAA	NA	False	NA	NA	False	NA	NA	NA	24733471	24738452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_24733500_24738500
ES.18483.1	chr2	+	211	1	Intergenic	novelGene_15363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACTTAAATTTTTAAAC	NA	False	NA	NA	False	AAGAAA	-15	NA	24744282	24744493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24744300_24744500
ES.18484.1	chr2	+	159	1	Intergenic	novelGene_15364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24750460	24750619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24750500_24750600
ES.18485.1	chr2	+	172	1	Intergenic	novelGene_15366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	24805024	24805196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24805000_24805200
ES.18486.1	chr2	+	159	1	Intergenic	novelGene_15367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	24805393	24805552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24805400_24805600
ES.18487.1	chr2	-	6093	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-6	-1407	1	178	multi-exon	TRUE	canonical	3	154	junction_23	33.3131324390158	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGCTTGTTCATTG	9607	False	NA	NA	False	NA	NA	NA	24809609	24679761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.10	chr2	-	3397	10	NNC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	-2680	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.1636043516997	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAAAAATTTTGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	24699974	24679949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24699774
ES.18487.100	chr2	-	4608	27	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-3	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.5802615888285	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTTAGAATAAAGTGCA	9594	False	NA	NA	False	AATAAA	-39	NA	24809622	24681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24737986_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.101	chr2	-	2982	15	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.939314364948	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	9598	False	NA	NA	False	AATAAA	-12	NA	24809618	24681167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691590_24692028_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24774157_24774715_24777014_24777082_24809565
ES.18487.102	chr2	-	4091	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	58.2875447228864	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGCTGAATCTGGTGTGG	9620	False	NA	NA	False	AATAAA	-19	NA	24809596	24681223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767628_24774673_24774715_24777014_24777082_24809565
ES.18487.103	chr2	-	4665	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-43	58	-20	0	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGTGCTGAATCTGGTG	9570	False	NA	NA	False	AATAAA	-16	NA	24809646	24681226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.106	chr2	-	4459	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-7	-46	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	65.0794714176444	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTGAACATTAGGACAT	9583	False	NA	NA	False	AATAAA	-18	NA	24809633	24681272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.107	chr2	-	3241	1	Genic_Genomic	ENSMUSG00000036893.18	novel	NA	NA	NA	NA	1139	2316	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTGAGAAGAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	24714257	24711016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_24711000_24714300
ES.18487.108	chr2	-	1752	1	Genic_Genomic	ENSMUSG00000036893.18	novel	NA	NA	NA	NA	640	328	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGCTGCAGACCAGTA	NA	False	NA	NA	False	NA	NA	NA	24714756	24713004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_24713000_24714800
ES.18487.109	chr2	-	2648	14	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	-869	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.7867820844732	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGATCATGCAAATACT	9615	False	NA	NA	False	ATTAAA	-24	NA	24809601	24725982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24726515_24727587_24727671_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.11	chr2	-	5127	27	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	-2	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	67.7643082993543	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTCTCTGGGTTTCT	9588	False	NA	16	True	AATAAA	-36	NA	24809628	24680765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777075_24809560
ES.18487.110	chr2	-	2650	6	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	1	1475	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	92.0856123398221	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCGTAGTTCTTCGA	9591	False	NA	NA	False	AATAAA	-23	NA	24809625	24751763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.111	chr2	-	224	1	Intergenic	novelGene_15365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTTGCCTGTTACTT	NA	False	NA	NA	False	AAGAAA	-29	NA	24775536	24775312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24775300_24775500
ES.18487.12	chr2	-	5150	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-77	-393	-54	31	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGACACATTCTTTCT	9536	False	NA	6	True	AATAAA	-26	NA	24809680	24680775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.13	chr2	-	5089	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	26	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	74.4247465525297	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9626	False	NA	1	True	AATAAA	-21	NA	24809590	24680780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714940_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.14	chr2	-	2467	10	NNC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	-6352	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	87.3180648230619	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	NA	False	NA	1	True	AATAAA	-21	NA	24703646	24680780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694022_24694767_24694917_24695085_24695254_24696225_24696381_24703538
ES.18487.15	chr2	-	4938	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-4	26	combination_of_known_junctions	FALSE	canonical	2	12	junction_18	65.1041749813328	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCATTATGACACATTC	9602	False	NA	1	True	AATAAA	-21	NA	24809614	24680780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.18	chr2	-	4533	26	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	25	combination_of_known_splicesites	FALSE	canonical	3	9	junction_24	57.3508500372924	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9590	False	NA	0	True	AATAAA	-20	NA	24809626	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24777014_24777082_24809565
ES.18487.19	chr2	-	4100	20	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-1	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	73.2189067813042	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9596	False	NA	0	True	AATAAA	-20	NA	24809620	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24774157_24774715_24777014_24777079_24809565
ES.18487.2	chr2	-	5928	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	-26	-1287	1	0	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCATTGTCTTTTTT	9591	False	NA	NA	False	AATAAA	-17	NA	24809625	24679939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.21	chr2	-	5109	26	NNC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	67	25	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	81.5747608025914	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9697	False	NA	0	True	AATAAA	-20	NA	24809519	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809316
ES.18487.22	chr2	-	4996	26	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	25	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	58.3316860719798	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9597	False	NA	0	True	AATAAA	-20	NA	24809619	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.23	chr2	-	4946	26	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	2	12	junction_18	74.6213481518526	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9614	False	NA	0	True	AATAAA	-20	NA	24809602	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.24	chr2	-	5115	27	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-19	25	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	50.78478782624	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATTATGACACATT	9571	False	NA	0	True	AATAAA	-20	NA	24809645	24680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.26	chr2	-	5117	8	ISM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	83554	-24	-867	24	intron_retention	FALSE	canonical	3	248	junction_2	13.0368394817712	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	NA	False	NA	-1	True	AATAAA	-19	NA	24698161	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085
ES.18487.27	chr2	-	4997	26	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-52	24	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	57.3307038156693	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9538	False	NA	-1	True	AATAAA	-19	NA	24809678	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.28	chr2	-	5900	26	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	24	intron_retention	FALSE	canonical	0	0	junction_4	69.4612870597716	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9607	False	NA	-1	True	AATAAA	-19	NA	24809609	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692114_24693025_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.29	chr2	-	5076	27	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.068109299655	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9606	False	NA	-1	True	AATAAA	-19	NA	24809610	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693019_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.3	chr2	-	5965	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	-12	0	-12	0	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCATTGTCTTTTTT	9578	False	NA	NA	False	AATAAA	-17	NA	24809638	24679939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.30	chr2	-	5101	27	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-3	24	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	58.0464515069128	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9594	False	NA	-1	True	AATAAA	-19	NA	24809622	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714940_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.31	chr2	-	5168	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	-58	843	-58	24	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCATTATGACACAT	9532	False	NA	-1	True	AATAAA	-19	NA	24809684	24680782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.32	chr2	-	5117	27	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.2524296507209	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTTCATTATGACACA	9606	False	NA	-2	True	AATAAA	-18	NA	24809610	24680783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692114_24693025_24693142_24693954_24694033_24694771_24694917_24695093_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738140_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.34	chr2	-	3856	21	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	603	22	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	60.8086342553424	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9857	False	NA	-3	True	AATAAA	-17	NA	24753332	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24742676_24742815_24746617_24746739_24748184_24748263_24753234
ES.18487.35	chr2	-	5246	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	50	22	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_26	56.510668207886	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9680	False	NA	-3	True	AATAAA	-17	NA	24809536	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809316
ES.18487.38	chr2	-	4938	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	1	22	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	74.3379741451164	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9598	False	NA	-3	True	AATAAA	-17	NA	24809618	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777079_24809565
ES.18487.40	chr2	-	5609	9	ISM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	82088	-22	-2333	22	3prime_fragment	FALSE	canonical	3	248	junction_2	14.4481832767999	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	NA	False	NA	-3	True	AATAAA	-17	NA	24699627	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225
ES.18487.41	chr2	-	4723	25	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	-2	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	57.4303775356639	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9628	False	NA	-3	True	AATAAA	-17	NA	24809588	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.43	chr2	-	4854	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-2	22	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	77.1203319494931	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9628	False	NA	-3	True	AATAAA	-17	NA	24809588	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753783_24753918_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.44	chr2	-	4838	25	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	2	22	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	74.4926823400945	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9608	False	NA	-3	True	AATAAA	-17	NA	24809608	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.45	chr2	-	4957	26	NIC	ENSMUSG00000036893.18	novel	4554	26	NA	NA	-3	22	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	77.134832598509	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9603	False	NA	-3	True	AATAAA	-17	NA	24809613	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.47	chr2	-	5101	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-1	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.2441301611145	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9612	False	NA	-3	True	AATAAA	-17	NA	24809604	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693918_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.49	chr2	-	5068	27	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	1	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	89.5699207885056	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9618	False	NA	-3	True	AATAAA	-17	NA	24809598	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24741257_24741414_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.5	chr2	-	6200	27	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	47	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	56.9993382085531	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTCATTGTCT	9677	False	NA	NA	False	AATAAA	-12	NA	24809539	24679944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809202
ES.18487.51	chr2	-	4386	25	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	2	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	80.4117874167435	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9599	False	NA	-3	True	AATAAA	-17	NA	24809617	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24777008_24777079_24809565
ES.18487.53	chr2	-	4451	25	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	75.7674507768489	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9606	False	NA	-3	True	AATAAA	-17	NA	24809610	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742672_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24809565
ES.18487.54	chr2	-	4994	26	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	2	22	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	75.1095626401858	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9608	False	NA	-3	True	AATAAA	-17	NA	24809608	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777079_24809565
ES.18487.56	chr2	-	5100	26	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	70	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	74.2283396015296	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTTCATTATGACAC	9700	False	NA	-3	True	AATAAA	-17	NA	24809516	24680784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809316
ES.18487.58	chr2	-	4938	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-3	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	74.1340940817748	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTTTTCATTATGAC	9622	False	NA	-5	True	AATAAA	-15	NA	24809594	24680786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738096_24742672_24742788_24746703_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.59	chr2	-	5075	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	58.2965282594134	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGTTTTCATTATGA	9597	False	NA	-6	True	AATAAA	-14	NA	24809619	24680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738096_24742672_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.6	chr2	-	6137	25	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-3	-5	intron_retention	FALSE	canonical	1	1	junction_17	60.389922241491	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTCATTGTCT	9594	False	NA	NA	False	AATAAA	-12	NA	24809622	24679944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.61	chr2	-	5367	27	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	3	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.5147234908523	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGTTTTCATTATGA	9609	False	NA	-6	True	AATAAA	-14	NA	24809607	24680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693649_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.62	chr2	-	4671	28	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	91.4708345881184	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGTTTTCATTATGA	9590	False	NA	-6	True	AATAAA	-14	NA	24809626	24680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24696919_24697015_24702791_24702841_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24777014_24777082_24809565
ES.18487.63	chr2	-	5059	27	NNC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-4	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	73.7374199480272	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGTTTTCATTATGA	9602	False	NA	-6	True	AATAAA	-14	NA	24809614	24680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748247_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777079_24809565
ES.18487.67	chr2	-	4906	26	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	17	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	69.2366839182814	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGAGTTTTCATTAT	9598	False	NA	-8	True	AATAAA	-12	NA	24809618	24680789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.68	chr2	-	4791	25	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-36	17	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	82.6014527717279	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGAGTTTTCATTAT	9554	False	NA	-8	True	AATAAA	-12	NA	24809662	24680789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.70	chr2	-	5089	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	57.9812763085366	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTTAAATGGAGTTTT	9615	False	NA	-14	True	AATAAA	-6	NA	24809601	24680795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738140_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.72	chr2	-	4995	26	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	57.5471980204076	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9593	False	NA	-25	True	AATGAA	-4	NA	24809623	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24809565
ES.18487.74	chr2	-	5059	25	NIC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-4	0	intron_retention	FALSE	canonical	3	13	junction_15	57.9611340085368	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9602	False	NA	-25	True	AATGAA	-4	NA	24809614	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.75	chr2	-	5097	27	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	57.4523213697169	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9597	False	NA	-25	True	AATGAA	-4	NA	24809619	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682253_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.76	chr2	-	4355	25	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_23	79.5832897033039	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9596	False	NA	-25	True	AATGAA	-4	NA	24809620	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24777014_24777079_24809565
ES.18487.77	chr2	-	5431	26	NNC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_18	76.1726880187381	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9606	False	NA	-25	True	AATGAA	-4	NA	24809610	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742672_24742815_24746617_24746739_24748184_24748263_24753234_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.78	chr2	-	4671	24	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	75.1966797320342	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9591	False	NA	-25	True	AATGAA	-4	NA	24809625	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24767466_24767639_24774157_24774715_24809565
ES.18487.8	chr2	-	5897	27	NIC	ENSMUSG00000036893.18	novel	4615	27	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_25	59.0242779254044	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTCATTGTCT	9623	False	NA	NA	False	AATAAA	-12	NA	24809593	24679944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777079_24809565
ES.18487.81	chr2	-	5109	27	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_23	62.4597858791639	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9573	False	NA	-25	True	AATGAA	-4	NA	24809643	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.84	chr2	-	4928	26	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	56.6815666685387	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9590	False	NA	-25	True	AATGAA	-4	NA	24809626	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.86	chr2	-	5155	28	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	89.5312591494356	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9625	False	NA	-25	True	AATGAA	-4	NA	24809591	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24720833_24720915_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738140_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.88	chr2	-	4416	24	NIC	ENSMUSG00000036893.18	novel	5953	27	NA	NA	171	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	70.2054236671736	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	NA	False	NA	-25	True	AATGAA	-4	NA	24774259	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157
ES.18487.90	chr2	-	4927	26	NIC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	74.6898225998697	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9602	False	NA	-25	True	AATGAA	-4	NA	24809614	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ES.18487.92	chr2	-	3686	20	NNC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	-5474	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	92.9110914483703	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	NA	False	NA	-25	True	AATGAA	-4	NA	24748218	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696227_24696381_24703544_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184
ES.18487.94	chr2	-	3138	14	NNC	ENSMUSG00000036893.18	novel	4902	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	90.8482706716186	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	9598	False	NA	-25	True	AATGAA	-4	NA	24809618	24680806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703575_24767559_24767639_24774157_24774715_24777008_24777082_24809565
ES.18487.96	chr2	-	4318	24	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	75.14618393706	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAAAAAAAAGTACTTT	NA	False	NA	-26	True	AATGAA	-3	NA	24774386	24680807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729642_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753783_24753921_24767466_24767639_24774157
ES.18487.97	chr2	-	4822	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	-22	-120	1	106	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCATGTACTTTTTTTTG	9591	False	NA	NA	False	AATAAA	-32	NA	24809625	24681048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.98	chr2	-	4957	26	NNC	ENSMUSG00000036893.18	novel	4680	27	NA	NA	-31	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	74.1091087518937	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTAGTCTTGTAGCT	9559	False	NA	NA	False	AATAAA	-20	NA	24809657	24681106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693649_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18487.99	chr2	-	4795	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	-43	1201	-43	14	multi-exon	FALSE	canonical	3	34	junction_23	50.1601134592868	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTTAGAATAAAGTGCA	9547	False	NA	NA	False	AATAAA	-39	NA	24809669	24681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ES.18488.1	chr2	+	177	1	Intergenic	novelGene_15368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTAAAGAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	24813911	24814088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24813900_24814100
ES.18489.1	chr2	-	2269	6	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-13	5	intron_retention	FALSE	canonical	3	9	junction_1	28.8444102037119	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGTGGCTGGCCTTCTCA	9368	False	NA	-26	True	AATAAA	-22	NA	24825213	24815358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24815709_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817852_24825039
ES.18489.10	chr2	-	4481	4	ISM	ENSMUSG00000026972.16	ENSMUST00000142887.8	902	6	4968	-803	-2043	0	intron_retention	FALSE	canonical	3	75	junction_1	4.98887651569859	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	NA	False	NA	-34	True	AATAAA	-14	NA	24820186	24815366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_24816461_24816556_24816740_24816889_24817045_24817137
ES.18489.11	chr2	-	1654	7	NIC	ENSMUSG00000026972.16	novel	1590	7	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_2	30.4940795711051	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9365	False	NA	-34	True	AATAAA	-14	NA	24825216	24815366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816461_24816594_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ES.18489.12	chr2	-	2343	5	NIC	ENSMUSG00000026972.16	novel	1590	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	76	junction_4	3.96074487943871	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9362	False	NA	-34	True	AATAAA	-14	NA	24825219	24815366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816740_24816889_24817045_24817137_24817852_24825039
ES.18489.13	chr2	-	1527	8	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.3015828503767	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTGGGCGAGTGGCTG	9414	False	NA	-35	True	AATAAA	-13	NA	24825167	24815367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816594_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ES.18489.2	chr2	-	1136	8	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.6203903584496	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9399	False	NA	-32	True	AATAAA	-16	NA	24825182	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24815689_24815767_24815846_24816283_24816461_24816556_24816740_24816889_24816959_24817137_24817189_24817740_24817852_24825039
ES.18489.3	chr2	-	1621	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	44	1	-20	-1	multi-exon	FALSE	canonical	3	62	junction_2	7.55658923167897	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9361	False	NA	-32	True	AATAAA	-16	NA	24825220	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ES.18489.4	chr2	-	1496	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	24.8445164976097	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9375	False	NA	-32	True	AATAAA	-16	NA	24825206	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24825039
ES.18489.5	chr2	-	1551	8	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	27.920440906407	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9311	False	NA	-32	True	AATAAA	-16	NA	24825270	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825159
ES.18489.6	chr2	-	1696	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	75	junction_2	4.41273409829124	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9363	False	NA	-32	True	AATAAA	-16	NA	24825218	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ES.18489.7	chr2	-	2186	7	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	9	junction_1	26.3733872598033	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9368	False	NA	-32	True	AATAAA	-16	NA	24825213	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24815709_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817852_24825039
ES.18489.8	chr2	-	2039	7	NIC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	62	junction_2	8.15815883368028	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCGAGTGGCTGGCC	9495	False	NA	-32	True	AATAAA	-16	NA	24825086	24815364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817852_24825039
ES.18489.9	chr2	-	1619	8	NNC	ENSMUSG00000026972.16	novel	1666	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.7559516653499	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9381	False	NA	-34	True	AATAAA	-14	NA	24825200	24815366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_24815709_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ES.1849.1	chr1	-	7788	7	FSM	ENSMUSG00000026667.15	ENSMUST00000123399.2	7775	7	-11	-2	-11	2	multi-exon	FALSE	canonical	2	4	junction_1	39.1237353363232	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTTATTTCTTTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	170042977	170020986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170027583_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ES.1849.2	chr1	-	7884	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	-20	0	-20	0	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042986	170020988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ES.1849.3	chr1	-	7636	9	NNC	ENSMUSG00000026667.15	novel	7864	8	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.8362159693235	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTCTCTTATTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	170042962	170020991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170023055_170023275_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ES.1849.5	chr1	-	7760	7	NIC	ENSMUSG00000026667.15	novel	7864	8	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	39.088219310796	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGAAGTGCTCTCT	NA	False	NA	NA	False	AATAAA	-7	NA	170042968	170020999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170038599_170038792_170039804_170040098_170042541
ES.1849.8	chr1	-	3025	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	-20	4859	-20	-4859	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTAAAACTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	170042986	170025847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ES.18490.1	chr2	+	179	1	Intergenic	novelGene_15369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAAGAGTGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	24829222	24829401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24829200_24829400
ES.18491.1	chr2	-	158	1	Intergenic	novelGene_15370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGTAAATAAATA	1230	False	NA	NA	False	NA	NA	NA	24833351	24833193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24833200_24833400
ES.18492.1	chr2	-	182	1	Intergenic	novelGene_15371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCTGAGCAAGCAAGAAC	678	False	NA	NA	False	NA	NA	NA	24833903	24833721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24833700_24833900
ES.18493.1	chr2	+	3534	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-53	422	-53	-422	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTGTCTCATGGTTT	NA	False	NA	15	True	NA	NA	NA	24839750	24851665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.10	chr2	+	2765	6	NNC	ENSMUSG00000026974.12	novel	3903	6	NA	NA	-9	-1110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	351.617405712516	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAACGGTTGTTGTAAA	NA	False	NA	4	True	GATAAA	-14	NA	24839794	24850977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24840060_24841484_24841545_24842597_24842705_24843284_24843389_24848047_24848229_24848929
ES.18493.11	chr2	+	6082	14	Fusion	ENSMUSG00000026974.12_ENSMUSG00000026975.11	novel	1666	9	NA	NA	-8	-2	multi-exon	FALSE	canonical	3	29	junction_6	387.040217777836	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGTGTATGCATCT	NA	False	NA	32	True	ATTAAA	-35	NA	24839795	24862171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929_24852823_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.13	chr2	+	5864	14	Fusion	ENSMUSG00000026974.12_ENSMUSG00000026975.11	novel	1666	9	NA	NA	22	-8	multi-exon	FALSE	canonical	3	39	junction_8	384.142925201348	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTAATTATGTGTAT	NA	False	NA	26	True	ATTAAA	-29	NA	24839825	24862165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929_24852638_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.14	chr2	+	1110	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	25	2768	25	41	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCATGTACAGTTTTT	NA	False	NA	-72	True	NA	NA	NA	24839828	24849319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.15	chr2	+	2866	2	ISM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	7610	1107	7192	-1107	3prime_fragment	FALSE	canonical	3	887	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGTTGTTGTAAAGGG	NA	False	NA	7	True	GATAAA	-17	NA	24847413	24850980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_24848229_24848929
ES.18493.16	chr2	+	4707	8	Fusion	ENSMUSG00000026974.12_ENSMUSG00000026975.11	novel	1666	9	NA	NA	-2641	0	intron_retention	FALSE	canonical	3	39	junction_2	30.3805791886319	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24849770	24862175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.18	chr2	+	1552	8	FSM	ENSMUSG00000026975.11	ENSMUST00000126909.8	1554	8	2	0	1	0	multi-exon	FALSE	canonical	3	9	junction_2	38.473950901346	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852435	24862173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24852638_24853034_24853169_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.19	chr2	+	1638	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	26	2	3	0	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852437	24862173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.2	chr2	+	1600	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-50	2353	-50	456	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTGGAAAGACCTGC	NA	False	NA	NA	False	AATGAA	-14	NA	24839753	24849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.20	chr2	+	1798	9	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	7	-24	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	36.416857360294	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTTTAGAAAT	NA	False	NA	10	True	ATTAAA	-13	NA	24852441	24862149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.21	chr2	+	1410	7	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	42.6122700117649	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852443	24862173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852638_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.22	chr2	+	1730	8	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	44.442120120628	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTATGCATCTG	NA	False	NA	33	True	ATTAAA	-36	NA	24852444	24862172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852823_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.23	chr2	+	2015	8	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	62	junction_3	24.0577536400239	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852450	24862173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859691_24861534
ES.18493.24	chr2	+	2067	7	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	2	junction_1	47.6144819239786	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGTGTATGCATCT	NA	False	NA	32	True	ATTAAA	-35	NA	24852450	24862171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852823_24853467_24853556_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859691_24861534
ES.18493.25	chr2	+	1573	7	NIC	ENSMUSG00000026975.11	novel	2296	7	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	44.02556075736	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAGAAATCTGTAATT	NA	False	NA	18	True	ATTAAA	-21	NA	24852452	24862157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852823_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.26	chr2	+	1382	1	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	2	-2705	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24852454	24853836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852500_24853800
ES.18493.27	chr2	+	1901	7	NIC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	3	-24	intron_retention	FALSE	canonical	3	12	junction_2	39.8859485143439	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTTTAGAAAT	NA	False	NA	10	True	ATTAAA	-13	NA	24852455	24862149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24852638_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859691_24861534
ES.18493.28	chr2	+	1943	8	NNC	ENSMUSG00000026975.11	novel	1554	8	NA	NA	5	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41.4167470810481	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAGAAATCTGTAATT	NA	False	NA	18	True	ATTAAA	-21	NA	24852457	24862157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24852638_24853034_24853289_24855262_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.29	chr2	+	1823	9	NNC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	43.6275070912836	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTATGCATCTGT	NA	False	NA	34	True	ATTAAA	-37	NA	24852459	24862173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24852823_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858874_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.3	chr2	+	1419	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-40	2524	-40	285	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTGTTGTTCAGCCT	NA	False	NA	34	True	AGTAAA	-38	NA	24839763	24849563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.31	chr2	+	2908	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	68	-1310	2	1310	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCCAGGCTGGACTGAC	NA	False	NA	NA	False	NA	NA	NA	24852479	24863485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ES.18493.33	chr2	+	1203	8	NNC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	653	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.1475872525253	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTGTAATTATGTGT	NA	False	NA	24	True	ATTAAA	-27	NA	24853137	24862163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861656
ES.18493.34	chr2	+	178	1	Intergenic	novelGene_15373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGTTGAAACTT	NA	False	NA	NA	False	NA	NA	NA	24855811	24855989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24855800_24856000
ES.18493.35	chr2	+	163	1	Intergenic	novelGene_15374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAATAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	24857894	24858057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_24857900_24858100
ES.18493.4	chr2	+	1284	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-39	2658	-39	151	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCGTGTAGTCAAGCTT	NA	False	NA	38	True	NA	NA	NA	24839764	24849429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.5	chr2	+	2881	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-33	1055	-33	-1055	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTAGTGATACTTGC	NA	False	NA	59	True	NA	NA	NA	24839770	24851032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.6	chr2	+	3925	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTTTTTCGAGACAG	NA	False	NA	NA	False	NA	NA	NA	24839781	24852087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.7	chr2	+	4343	6	FSM	ENSMUSG00000026974.12	ENSMUST00000148042.3	1103	6	-438	-2802	-20	-7	multi-exon	FALSE	canonical	1	5	junction_1	356.686641185229	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTTTAGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	24839783	24852080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840487_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.8	chr2	+	1749	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	2170	-16	639	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGATTATTTCAGCTTAC	NA	False	NA	26	True	NA	NA	NA	24839787	24849917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18493.9	chr2	+	2048	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	-16	1871	-16	938	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCCTATGTTGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	24839787	24850216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ES.18494.1	chr2	-	160	1	Intergenic	novelGene_15372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	24841833	24841673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24841700_24841800
ES.18495.1	chr2	-	185	1	Intergenic	novelGene_15375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24862517	24862332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24862300_24862500
ES.18496.1	chr2	-	743	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	35	-2	35	2	multi-exon	FALSE	canonical	3	317	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTGAATCAAGTCA	NA	False	NA	-1	True	ATTAAA	-23	NA	24865075	24864126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_24864694_24864899
ES.18496.2	chr2	-	942	1	NIC	ENSMUSG00000036850.5	novel	776	2	NA	NA	39	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTGTTTTGAATCAAG	NA	False	NA	-4	True	ATTAAA	-20	NA	24865071	24864129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_24864100_24865100
ES.18497.1	chr2	+	5531	36	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-853	8	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	10.0369114690095	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTCTGGTGTAAAG	NA	False	NA	18	True	AATAAA	-21	NA	24865191	24944077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.10	chr2	+	5437	36	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-798	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	10.8814014703614	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATTTTACTCTGGT	NA	False	NA	12	True	AATAAA	-15	NA	24865246	24944071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943019_24943083_24943406_24943511_24943682
ES.18497.11	chr2	+	5288	35	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-795	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.92141779661339	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTGTAAAGGTTGCAG	NA	False	NA	25	True	AATAAA	-28	NA	24865249	24944084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866230_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.12	chr2	+	5369	36	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-706	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_33	10.8814014703614	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTCTGGTGTAAAGG	NA	False	NA	19	True	AATAAA	-22	NA	24865338	24944078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943002_24943083_24943406_24943511_24943682
ES.18497.13	chr2	+	6463	34	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-78	-2	intron_retention	FALSE	canonical	2	2	junction_1	9.81967815009909	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTATTTTACTC	NA	False	NA	8	True	AATAAA	-11	NA	24865966	24944067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24943511_24943682
ES.18497.14	chr2	+	4412	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	-49	211	-49	-9	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTAGAGGCTACTTCA	NA	False	NA	NA	False	AATAAA	-41	NA	24865995	24943858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.15	chr2	+	5094	34	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	6	-29	intron_retention	FALSE	canonical	3	15	junction_1	7.55961917406776	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTGAGGCTGCACCC	NA	False	NA	NA	False	AATAAA	-21	NA	24866050	24943838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24943511_24943682
ES.18497.16	chr2	+	4530	35	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	9.9141644851922	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTATTTTACTCT	NA	False	NA	9	True	AATAAA	-12	NA	24866066	24944068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940031_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.17	chr2	+	4386	33	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	9.26266025502393	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24866069	24944069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.18	chr2	+	5681	33	NIC	ENSMUSG00000036833.17	novel	4616	34	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_7	10.0263325174263	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTATTTTACTCT	NA	False	NA	9	True	AATAAA	-12	NA	24866074	24944068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877125_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.19	chr2	+	4550	35	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	10.9779584137606	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTATTTTACTCT	NA	False	NA	9	True	AATAAA	-12	NA	24866099	24944068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.2	chr2	+	5300	35	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-853	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	12.5816365332444	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTATTTTACTC	NA	False	NA	8	True	AATAAA	-11	NA	24865191	24944067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873565_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.21	chr2	+	551	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	-35	-33	-35	33	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-16	NA	24875960	24876511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24876000_24876500
ES.18497.22	chr2	+	435	2	Genic_Genomic	ENSMUSG00000084383.2	novel	483	1	NA	NA	-33	32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	24875962	24876510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_24876126_24876238
ES.18497.23	chr2	+	3071	22	NNC	ENSMUSG00000036833.17	novel	4616	34	NA	NA	6728	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.3862310930088	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTCTGGTGTAAAGG	NA	False	NA	19	True	AATAAA	-22	NA	24892896	24944078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940214_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.24	chr2	+	2004	14	NIC	ENSMUSG00000036833.17	novel	4616	34	NA	NA	-9983	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	13.0302333919435	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTGGCTATTTTAC	NA	False	NA	6	True	AATAAA	-9	NA	24919534	24944065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942564_24942650_24943406_24943511_24943682
ES.18497.25	chr2	+	2141	1	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	5	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTGGCTATTTTAC	7060	False	NA	6	True	AATAAA	-9	NA	24941924	24944065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24941900_24944100
ES.18497.3	chr2	+	5507	37	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-853	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0591392522921	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTCTGGTGTAAAG	NA	False	NA	18	True	AATAAA	-21	NA	24865191	24944077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866236_24868137_24868234_24869843_24869910_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.4	chr2	+	5411	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	-833	-4	-833	4	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATTTTACTCTGGTGT	NA	False	NA	14	True	AATAAA	-17	NA	24865211	24944073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.5	chr2	+	5256	33	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-818	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.3281846372805	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTCTGGTGTAAAG	NA	False	NA	18	True	AATAAA	-21	NA	24865226	24944077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866326_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873666_24877130_24877212_24879210_24879290_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.6	chr2	+	5391	36	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-818	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	9.94696138608804	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTATTTTACTCT	NA	False	NA	9	True	AATAAA	-12	NA	24865226	24944068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866230_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.8	chr2	+	5539	37	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-803	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.9119713619701	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24865241	24944069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24866326_24868137_24868234_24869843_24869910_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18497.9	chr2	+	5312	36	NNC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-802	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	12.3320058119893	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTATTTTACTC	NA	False	NA	8	True	AATAAA	-11	NA	24865242	24944067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_24866230_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929779_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942100_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ES.18498.1	chr2	-	6516	4	Antisense	novelGene_ENSMUSG00000084383.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACCATGAACTACTTGA	NA	False	NA	NA	False	NA	NA	NA	24879745	24868281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_24871884_24872045_24872184_24873500_24873660_24877128
ES.18498.2	chr2	-	186	1	Intergenic	novelGene_15376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24874391	24874205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24874200_24874400
ES.18498.3	chr2	-	2153	1	Antisense	novelGene_ENSMUSG00000036833.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAAGAATGTTGGGGGC	NA	False	NA	NA	False	NA	NA	NA	24879745	24877592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_24877600_24879700
ES.18499.1	chr2	-	176	1	Intergenic	novelGene_15377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGACAGAATATTT	9351	False	NA	NA	False	NA	NA	NA	24925830	24925654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_24925700_24925800
ES.185.1	chr1	-	4912	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-79	11	-79	-11	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCATTGTACCACGCCCT	NA	False	NA	NA	False	AATAAA	-32	NA	23422335	23405515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ES.185.12	chr1	-	2319	2	NIC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-23	-6856	intron_retention	FALSE	canonical	3	72	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATATAACCACGGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	23422279	23416204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23418140_23421895
ES.185.3	chr1	-	5400	5	NIC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-65	1148	intron_retention	FALSE	canonical	3	47	junction_1	9.22970747098737	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAAGTTTTATTT	NA	False	NA	NA	False	AGTAAA	-18	NA	23422321	23407656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23418140_23421895
ES.185.4	chr1	-	2711	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-23	2156	-23	1144	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTGGTTGAAAGTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	23422279	23407660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ES.185.5	chr1	-	2296	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-98	2646	-98	654	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATTTTTTTGTGTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	23422354	23408150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ES.185.7	chr1	-	1759	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-24	3109	-24	191	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTATATAACAGTC	NA	False	NA	NA	False	AATAAA	-25	NA	23422280	23408613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ES.185.9	chr1	-	1641	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-82	3285	-82	15	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTGCTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	23422338	23408789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ES.1850.1	chr1	-	756	1	FSM	ENSMUSG00000096964.2	ENSMUST00000180900.2	204	1	-147	-405	12	405	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGTGTGGTTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	170083296	170082540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170082500_170083300
ES.18500.1	chr2	+	3999	14	NIC	ENSMUSG00000006476.20	novel	2922	15	NA	NA	-1	0	intron_retention	TRUE	canonical	1	2	junction_10	1.86528548507418	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9530	False	NA	2	True	ATTAAA	-18	NA	24944394	24952893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ES.18500.2	chr2	+	4078	13	NIC	ENSMUSG00000006476.20	novel	2922	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_10	1.93649167310371	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	9553	False	NA	1	True	ATTAAA	-17	NA	24944417	24952892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504
ES.18501.1	chr2	+	1358	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	-20	1244	-20	-1244	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAAAACTTGAGTCT	7931	False	NA	NA	False	NA	NA	NA	25070749	25072107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25070700_25072100
ES.18501.2	chr2	+	2159	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	1	422	1	-422	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGGTTTCCCCTTCGT	7952	False	NA	NA	False	AATAAA	-25	NA	25070770	25072929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25070800_25072900
ES.18501.3	chr2	+	2572	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	1	9	1	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTGGTTTTA	7952	False	NA	NA	False	AATAAA	-24	NA	25070770	25073342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25070800_25073300
ES.18501.4	chr2	+	1877	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	1	704	1	-704	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTGCTGAATGAGTG	7952	False	NA	NA	False	TATAAA	-27	NA	25070770	25072647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25070800_25072600
ES.18502.1	chr2	-	1540	1	Intergenic	novelGene_15378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGCCATCTCTTCTTA	4286	False	NA	NA	False	NA	NA	NA	25075937	25074397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25074400_25075900
ES.18503.1	chr2	-	4362	3	NNC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	162	1496	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATCTCCTTTGTCTTTGG	8551	False	NA	NA	False	TTTAAA	-10	NA	25086609	25081481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25082708_25082917_25085938_25086493
ES.18503.2	chr2	-	3340	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	227	-312	100	312	multi-exon	FALSE	canonical	3	13	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTCCTGATTCTGGA	8489	False	NA	NA	False	NA	NA	NA	25086671	25082665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25085938_25086603
ES.18503.3	chr2	-	3343	1	Genic_Genomic	ENSMUSG00000059555.7	novel	NA	NA	NA	NA	718	267	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTAATGGTAAATTCAC	9107	False	NA	NA	False	NA	NA	NA	25086053	25082710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_25082700_25086100
ES.18503.4	chr2	-	3348	2	NNC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	157	267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTAATGGTAAATTCAC	8546	False	NA	NA	False	NA	NA	NA	25086614	25082710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25085938_25086493
ES.18503.5	chr2	-	3290	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	-31	-4	-31	4	multi-exon	FALSE	canonical	3	13	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACCTTCTTTTCTTTTCT	8231	False	NA	NA	False	AATAAA	-21	NA	25086929	25082973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25085938_25086603
ES.18503.6	chr2	-	3087	1	NIC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	706	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCACCTTCTTTTCT	9095	False	NA	NA	False	AATAAA	-16	NA	25086065	25082978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25083000_25086100
ES.18504.10	chr2	-	2715	12	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	539	junction_6	42.8248402466228	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101391	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.11	chr2	-	5211	5	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	-25	0	intron_retention	FALSE	canonical	3	605	junction_2	46.5584310302656	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25100763	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25091199_25093152_25096358_25099865_25100550_25100720
ES.18504.12	chr2	-	3123	10	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	206	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	192.007523000764	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101187	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090780_25091056_25091199_25093152_25093264_25093359_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.13	chr2	-	4267	12	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	209	-3	intron_retention	FALSE	canonical	3	539	junction_6	56.9478520335901	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101184	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.15	chr2	-	2339	11	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	3	30	junction_6	182.318978715876	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101426	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.16	chr2	-	5393	8	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	539	junction_4	62.9262607002377	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101413	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25093503_25093898_25094313_25095138_25095252_25096171_25096358_25099865_25100550_25100720
ES.18504.17	chr2	-	3461	10	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-51	-3	intron_retention	FALSE	canonical	3	539	junction_4	55.4091403967448	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101444	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25091199_25093152_25093260_25093359_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.18	chr2	-	3006	1	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	877	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	2424	False	NA	NA	False	AATAAA	-13	NA	25092736	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25089700_25092700
ES.18504.19	chr2	-	2528	13	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	177.13812877714	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101392	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093891_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.2	chr2	-	2965	12	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-41	-1	intron_retention	TRUE	canonical	3	539	junction_6	55.4442613414813	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGAGGAATCTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	25101434	25089724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.21	chr2	-	2716	11	ISM	ENSMUSG00000013465.20	ENSMUST00000128876.8	2754	12	206	3	206	-3	intron_retention	FALSE	canonical	3	539	junction_7	56.3031082623331	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101187	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449
ES.18504.22	chr2	-	2931	11	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	202	-3	intron_retention	FALSE	canonical	3	539	junction_5	54.8127722342156	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATGGTGAGGAATCT	NA	False	NA	NA	False	AATAAA	-13	NA	25101191	25089730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.23	chr2	-	2570	13	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	170.507799593515	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCCATGGTGAGGAATC	NA	False	NA	NA	False	AATAAA	-12	NA	25101392	25089731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090529_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.25	chr2	-	2603	13	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	231.720542296582	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATCCATGGTGAGGA	NA	False	NA	NA	False	AATAAA	-9	NA	25101398	25089734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093891_25093995_25094136_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.28	chr2	-	1294	3	ISM	ENSMUSG00000013465.20	ENSMUST00000128876.8	2754	12	-5	9853	-5	-4402	5prime_fragment	FALSE	canonical	3	575	junction_1	48	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAACTGAATGAAAGT	NA	False	NA	NA	False	NA	NA	NA	25101398	25099580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25100097_25100449_25100550_25100720
ES.18504.29	chr2	-	1610	2	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-33	-4409	intron_retention	FALSE	canonical	3	611	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAGAAAAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	25101426	25099587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25100885_25101113
ES.18504.3	chr2	-	2584	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	52	1	52	-1	multi-exon	FALSE	canonical	3	539	junction_7	54.5501807716732	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGAGGAATCTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	25101449	25089724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.4	chr2	-	2593	13	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	176.879824237312	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101413	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090479_25090670_25090828_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.5	chr2	-	2568	13	NNC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	177.671728351912	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101417	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25090479_25090670_25090799_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.6	chr2	-	3526	9	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	539	junction_4	57.4737711917358	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101392	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25091199_25093152_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720
ES.18504.8	chr2	-	2776	12	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-36	0	intron_retention	FALSE	canonical	3	539	junction_6	53.4874666712595	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101429	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ES.18504.9	chr2	-	2892	12	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	-14	0	intron_retention	FALSE	canonical	3	539	junction_7	55.8576999582698	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101407	25089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100550_25100720_25100885_25101113
ES.18505.1	chr2	-	1683	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	-83	-2	-83	2	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTGTCCAATTCCTTC	NA	False	NA	-22	True	ATTAAA	-20	NA	25114797	25112169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ES.18505.2	chr2	-	2114	3	NIC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1343	junction_1	13	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCGCCTGTCCAATTC	NA	False	NA	-26	True	ATTAAA	-16	NA	25114667	25112173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25114057_25114135_25114245_25114545
ES.18505.6	chr2	-	1630	3	NIC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	1369	junction_2	18.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCGCCTGTCCAATT	NA	False	NA	-27	True	ATTAAA	-15	NA	25114670	25112174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25113381_25113945_25114245_25114545
ES.18505.7	chr2	-	2415	2	NIC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1343	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCGCCTGTCCAAT	NA	False	NA	-28	True	ATTAAA	-14	NA	25114669	25112175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25114057_25114135
ES.18505.8	chr2	-	2191	2	FSM	ENSMUSG00000036752.5	ENSMUST00000145607.2	831	2	-1	-1359	-1	-4	multi-exon	FALSE	canonical	3	1369	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTCGCCTGTCCAAT	NA	False	NA	-28	True	ATTAAA	-14	NA	25114667	25112175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25114245_25114545
ES.18506.1	chr2	-	782	3	ISM	ENSMUSG00000006469.14	ENSMUST00000006638.8	2183	13	3552	1	2234	-1	3prime_fragment	FALSE	canonical	2	3	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTGTTGGCTTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25120824	25118910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25119528_25120584_25120710_25120784
ES.18507.1	chr2	-	2317	1	FSM	ENSMUSG00000089953.4	ENSMUST00000205192.2	1707	1	-103	-507	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGGCTGCAGTGTCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	25126804	25124487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25124500_25126800
ES.18507.2	chr2	-	2021	2	FSM	ENSMUSG00000089953.4	ENSMUST00000091318.5	2021	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGGCTGCAGTGTCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	25126799	25124487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25126353_25126643
ES.18508.1	chr2	+	3146	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-2071	0	intron_retention	FALSE	canonical	3	42	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGTTCACTGATTGA	NA	False	NA	16	True	ATTAAA	-17	NA	25130869	25134273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25132536_25132793
ES.18508.2	chr2	+	3042	3	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-2066	-3	intron_retention	FALSE	canonical	0	0	junction_1	21	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCACTTGTTCACTGAT	NA	False	NA	13	True	ATTAAA	-14	NA	25130874	25134270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25131062_25131157_25132536_25132793
ES.18508.3	chr2	+	1515	2	NNC	ENSMUSG00000044628.6	novel	1137	2	NA	NA	-1341	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGCACTTGTTCACT	NA	False	NA	10	True	ATTAAA	-11	NA	25131599	25134267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25131641_25132793
ES.18509.1	chr2	-	4792	14	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	6	intron_retention	FALSE	canonical	1	2	junction_13	51.3601968696111	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCATCCTCATTATT	NA	False	NA	NA	False	AATAAA	-25	NA	25145394	25134824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145161
ES.18509.10	chr2	-	4802	14	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-6	5	intron_retention	FALSE	canonical	3	15	junction_13	48.1394670101744	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145386	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
ES.18509.11	chr2	-	4944	12	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	7	5	intron_retention	FALSE	canonical	3	158	junction_2	17.43796561036	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145373	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.12	chr2	-	5060	11	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-9	5	intron_retention	FALSE	canonical	0	0	junction_6	57.7969722390369	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145407	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140031_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.13	chr2	-	4752	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	5	intron_retention	FALSE	canonical	0	0	junction_12	87.9894248696336	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145397	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25136247_25136343_25136608_25136691_25137867_25137971_25138759_25138916_25139025_25139164_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144905_25145228
ES.18509.14	chr2	-	3361	13	NIC	ENSMUSG00000115074.2	novel	3210	14	NA	NA	10	49	intron_retention	FALSE	canonical	0	0	junction_1	67.8245285030915	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145388	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25136608_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25144954_25145228
ES.18509.15	chr2	-	7075	5	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-6	5	intron_retention	FALSE	canonical	3	174	junction_4	19.702474463884	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145386	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25139333_25139416_25140210_25140291_25141831_25144875_25144954_25145228
ES.18509.16	chr2	-	6923	1	FSM	ENSMUSG00000115018.3	ENSMUST00000228627.3	2045	1	-4873	-5	-4873	5	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25141748	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25134800_25141700
ES.18509.17	chr2	-	4713	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	5	intron_retention	FALSE	canonical	2	10	junction_11	65.2678243002545	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145395	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25145040_25145228
ES.18509.18	chr2	-	6008	5	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2362	12	NA	NA	1	5	intron_retention	FALSE	canonical	3	177	junction_3	17.3853386507137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145394	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.2	chr2	-	4748	14	FSM	ENSMUSG00000115018.3_ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	4	-2416	4	6	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCATCCTCATTATT	NA	False	NA	NA	False	AATAAA	-25	NA	25145417	25134824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.20	chr2	-	4648	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	4	intron_retention	FALSE	canonical	1	2	junction_5	53.2861119075339	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTGCCATCCTCATTA	NA	False	NA	NA	False	AATAAA	-23	NA	25145403	25134826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25139087_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.21	chr2	-	8285	10	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-1	3	intron_retention	FALSE	canonical	3	158	junction_2	18.1107702762748	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCTGCCATCCTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	25145396	25134827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732
ES.18509.22	chr2	-	4733	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-8	3	intron_retention	FALSE	canonical	0	0	junction_5	68.653518158617	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCTGCCATCCTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	25145366	25134827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138253_25138347_25138495_25138643_25138759_25138916_25139000_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.23	chr2	-	4595	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	3	intron_retention	FALSE	canonical	2	4	junction_2	68.0177672866926	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCTGCCATCCTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	25145397	25134827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138347_25138498_25138643_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.24	chr2	-	4616	15	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-6	2	multi-exon	FALSE	canonical	2	3	junction_1	49.2739116302627	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTCTGCCATCCTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	25145386	25134828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25136247_25136343_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.26	chr2	-	3717	13	NNC	ENSMUSG00000115074.2	novel	3210	14	NA	NA	155	44	intron_retention	FALSE	canonical	0	0	junction_5	91.4388077107065	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTACCTCTGCCATCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	25145243	25134830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25136247_25136343_25136608_25136691_25136818_25137971_25138498_25138643_25138748_25138866_25139025_25139111_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
ES.18509.28	chr2	-	4883	12	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	170	junction_6	15.3821835331637	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145397	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.29	chr2	-	3262	14	NNC	ENSMUSG00000115074.2	novel	3210	14	NA	NA	16	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.5971678427372	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145382	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25136247_25136343_25136608_25136691_25136818_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.30	chr2	-	4597	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_6	67.8245285030915	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145396	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139000_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25144954_25145228
ES.18509.31	chr2	-	6149	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	1	intron_retention	TRUE	canonical	3	15	junction_12	65.5427659369565	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145403	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138061_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25141831_25144875_25145040_25145228
ES.18509.32	chr2	-	5121	10	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	14	junction_1	57.3038253091513	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145395	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.33	chr2	-	4721	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_12	53.8910294534773	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145379	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144905_25145228
ES.18509.34	chr2	-	4872	12	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	4	1	intron_retention	FALSE	canonical	3	150	junction_1	18.5855182226191	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145376	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.35	chr2	-	5185	11	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-6	1	intron_retention	FALSE	canonical	3	158	junction_2	17.8728844901991	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145404	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138498_25138643_25138759_25138916_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.36	chr2	-	4722	14	NNC	ENSMUSG00000115074.2	novel	3210	14	NA	NA	33	43	intron_retention	FALSE	canonical	0	0	junction_6	85.7613311298266	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTACCTCTGCCATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	25145365	25134831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25136247_25136343_25136608_25136691_25138253_25138347_25138498_25138643_25138759_25138916_25139000_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145161
ES.18509.37	chr2	-	5108	10	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	170	junction_4	16.7671047730112	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTACCTCTGCCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	25145372	25134832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.38	chr2	-	4829	11	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_1	72.4528122297541	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTACCTCTGCCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	25145380	25134832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25136608_25136691_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25144954_25145228
ES.18509.39	chr2	-	4619	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	68.653518158617	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTACCTCTGCCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	25145394	25134832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25138133_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.4	chr2	-	4616	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	6	intron_retention	FALSE	canonical	2	10	junction_11	65.2901643094544	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCCATCCTCATTATT	NA	False	NA	NA	False	AATAAA	-25	NA	25145394	25134824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25144954_25145228
ES.18509.41	chr2	-	4860	12	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	14	junction_3	52.3446935433646	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTACCTCTGCCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	25145376	25134832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138253_25138347_25138498_25138643_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.42	chr2	-	3496	14	NNC	ENSMUSG00000115074.2	novel	3210	14	NA	NA	-5	40	intron_retention	FALSE	canonical	0	0	junction_2	67.1116706047536	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCATTACCTCTGCCAT	NA	False	NA	NA	False	AATAAA	-15	NA	25145403	25134834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25136608_25136691_25136818_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.43	chr2	-	4847	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	2	junction_12	53.1760049270345	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCATTACCTCTGCCA	NA	False	NA	NA	False	AATAAA	-14	NA	25145365	25134835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138067_25138133_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145161
ES.18509.45	chr2	-	2379	13	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	10	5	intron_retention	FALSE	non_canonical	0	0	junction_2	53.5964214186814	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145411	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138234_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.46	chr2	-	2849	11	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	9	5	intron_retention	FALSE	canonical	2	12	junction_4	55.2381208949037	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145412	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138495_25138643_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.47	chr2	-	2557	12	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-1	5	intron_retention	FALSE	canonical	3	158	junction_2	17.43796561036	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145396	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138067_25138133_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.48	chr2	-	2399	13	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	9	5	intron_retention	FALSE	canonical	0	0	junction_6	53.1347866802489	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145412	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139000_25139111_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.49	chr2	-	2770	9	NNC	ENSMUSG00000006471.19	novel	2362	12	NA	NA	5	5	intron_retention	FALSE	canonical	0	0	junction_3	81.4351736045304	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145390	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138759_25138916_25139000_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875
ES.18509.5	chr2	-	4732	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	23	5	intron_retention	FALSE	canonical	3	150	junction_2	17.8440388427683	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145335	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.51	chr2	-	2328	13	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	5	intron_retention	FALSE	canonical	2	9	junction_5	51.4896834327033	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145394	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139164_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.52	chr2	-	2352	14	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.35547308111	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145407	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138278_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.53	chr2	-	2338	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	3	-5	3	5	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTCACTTCTCTTTTA	NA	False	NA	-1	True	CATAAA	-21	NA	25145418	25137235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.54	chr2	-	2398	13	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	9	4	intron_retention	FALSE	canonical	3	150	junction_2	17.8440388427683	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGCTCACTTCTCTTTT	NA	False	NA	-2	True	CATAAA	-20	NA	25145412	25137236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.55	chr2	-	2880	10	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	4	intron_retention	FALSE	canonical	3	158	junction_1	18.3289557063121	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGCTCACTTCTCTTTT	NA	False	NA	-2	True	CATAAA	-20	NA	25145394	25137236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25138067_25138133_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.56	chr2	-	4114	10	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-1	4	intron_retention	FALSE	canonical	3	158	junction_2	18.5957648171782	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGCTCACTTCTCTTTT	NA	False	NA	-2	True	CATAAA	-20	NA	25145396	25137236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138067_25138133_25138498_25138643_25138759_25138916_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25141831_25144875
ES.18509.57	chr2	-	2295	14	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	51.8584783342891	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCGCTCACTTCTCTTT	NA	False	NA	-3	True	CATAAA	-19	NA	25145394	25137237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144940_25145231
ES.18509.58	chr2	-	2397	14	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	48.1394670101744	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCGCTCACTTCTCTTT	NA	False	NA	-3	True	CATAAA	-19	NA	25145393	25137237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
ES.18509.59	chr2	-	3717	12	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	14	junction_5	52.3596905078959	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGCCGCTCACTTCTCT	NA	False	NA	-5	True	CATAAA	-17	NA	25145383	25137239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138748_25138916_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25141831_25144875_25144954_25145228
ES.18509.6	chr2	-	5201	9	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-4	5	intron_retention	FALSE	canonical	3	170	junction_4	17.3475502593306	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145384	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138759_25138916_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.60	chr2	-	2866	9	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	7	0	intron_retention	FALSE	canonical	2	9	junction_3	79.2208148152996	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145373	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25138495_25138643_25138759_25138916_25139025_25139164_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.61	chr2	-	7984	3	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	150	junction_1	14.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145406	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25138253_25138347_25139025_25139111
ES.18509.62	chr2	-	2315	14	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	48.3260621613604	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145411	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.63	chr2	-	2128	13	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	78.8979650490993	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145396	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138347_25138498_25138643_25138748_25138916_25139025_25139164_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.64	chr2	-	2189	13	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	65.455402544192	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145375	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25144875_25144954_25145228
ES.18509.66	chr2	-	7752	5	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	179	junction_1	19.7357543559906	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145403	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25138759_25138916_25139025_25139111_25139333_25139416_25140210_25140291
ES.18509.67	chr2	-	2445	6	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	44	0	intron_retention	FALSE	canonical	3	170	junction_4	19.7240969375026	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25140310	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25139025_25139111_25139333_25139416_25139539_25139805_25140210_25140291
ES.18509.68	chr2	-	3019	6	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-458	0	intron_retention	FALSE	canonical	1	1	junction_1	73.9280731522201	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25140812	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25138278_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25140016_25140107
ES.18509.69	chr2	-	2617	11	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145394	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.7	chr2	-	4838	13	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2336	14	NA	NA	-5	5	intron_retention	FALSE	canonical	3	150	junction_2	19.1717384593979	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145403	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.70	chr2	-	3243	8	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_3	68.7930941004863	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145411	25137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138759_25138916_25139000_25139111_25139333_25139416_25140210_25140291_25140391_25141732_25141831_25144875
ES.18509.71	chr2	-	2482	12	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	4	-1	intron_retention	FALSE	canonical	3	14	junction_3	52.0600416239201	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTAGCCGCTCACTTCT	NA	False	NA	-7	True	CATAAA	-15	NA	25145417	25137241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138498_25138643_25138748_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.73	chr2	-	3051	8	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	174	junction_7	17.6184041066524	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTAGCCGCTCACTTCT	NA	False	NA	-7	True	CATAAA	-15	NA	25145386	25137241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.74	chr2	-	2231	14	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.794541760817	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTAGCCGCTCACTTCT	NA	False	NA	-7	True	CATAAA	-15	NA	25145395	25137241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139000_25139164_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.75	chr2	-	2475	11	NNC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-610	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	70.7075667803666	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTAGCCGCTCACTTC	NA	False	NA	-8	True	CATAAA	-14	NA	25140964	25137242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138748_25138916_25139025_25139164_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291
ES.18509.77	chr2	-	2379	13	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	6	-2	intron_retention	FALSE	canonical	3	150	junction_3	18.5313173363963	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTAGCCGCTCACTTC	NA	False	NA	-8	True	CATAAA	-14	NA	25145374	25137242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.78	chr2	-	2461	13	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	15	junction_12	49.9913881472488	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTAGCCGCTCACTTC	NA	False	NA	-8	True	CATAAA	-14	NA	25145395	25137242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25137867_25137971_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
ES.18509.79	chr2	-	7677	4	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	174	junction_3	4.08248290463863	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTAGCCGCTCACTTC	NA	False	NA	-8	True	CATAAA	-14	NA	25145365	25137242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25139025_25139111_25139333_25139416_25144954_25145228
ES.18509.8	chr2	-	5036	11	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2362	12	NA	NA	0	5	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145398	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.80	chr2	-	2071	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	53	212	-10	-13	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTCCCTACCACCAAGG	NA	False	NA	NA	False	NA	NA	NA	25145368	25137452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.81	chr2	-	1902	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	58	376	-5	-18	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACCCACAGTTTCGCTT	NA	False	NA	NA	False	NA	NA	NA	25145363	25137616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ES.18509.82	chr2	-	1557	1	NIC	ENSMUSG00000006471.19	novel	4517	12	NA	NA	-2224	478	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACAACAGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	25142578	25141021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25141000_25142600
ES.18509.9	chr2	-	5071	11	Fusion	ENSMUSG00000115018.3_ENSMUSG00000006471.19	novel	2362	12	NA	NA	7	5	intron_retention	FALSE	canonical	3	15	junction_10	54.3066294295641	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGCCATCCTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25145388	25134825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
ES.1851.1	chr1	+	4525	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTACTGAGAAATGGCA	NA	False	NA	NA	False	NA	NA	NA	170405154	170409679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170405200_170409700
ES.18510.1	chr2	+	853	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGCTCTGAATTGCCA	NA	False	NA	5	True	ATTAAA	-15	NA	25145450	25146303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25145400_25146300
ES.18510.2	chr2	+	1957	2	Genic_Genomic	ENSMUSG00000078201.6	novel	854	1	NA	NA	25	1366	multi-exon	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGACTTGCCTCAAAC	NA	False	NA	23	True	NA	NA	NA	25145475	25147670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_25146687_25146924
ES.18511.1	chr2	-	281	1	Intergenic	novelGene_15379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAGATGGCAGATACCC	NA	False	NA	NA	False	NA	NA	NA	25146916	25146635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25146600_25146900
ES.18511.2	chr2	-	179	1	Intergenic	novelGene_15380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25146916	25146737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25146700_25146900
ES.18512.1	chr2	-	162	1	Intergenic	novelGene_15381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25149400	25149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25149200_25149400
ES.18513.1	chr2	+	179	1	Intergenic	novelGene_15382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCATG	NA	False	NA	NA	False	NA	NA	NA	25149923	25150102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25149900_25150100
ES.18514.1	chr2	+	3074	5	NNC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-77	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.0121942152507	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTTTTGCCTTCTTT	NA	False	NA	12	True	AATAAA	-14	NA	25152552	25159895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25154566_25154905_25155118_25158843_25159058_25159144_25159252_25159367
ES.18514.10	chr2	+	2956	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	6	-304	intron_retention	FALSE	canonical	3	416	junction_6	46.7767689745934	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25162495	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.11	chr2	+	2991	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	14	-1	14	1	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGGCATCTGTGG	NA	False	NA	19	True	ATTAAA	-20	NA	25162503	25175928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.12	chr2	+	2896	12	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	18	-305	intron_retention	FALSE	canonical	0	0	junction_4	143.984732891321	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTATTTTGTTGGATCCC	NA	False	NA	33	True	ATTAAA	-20	NA	25162507	25175622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167694_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.13	chr2	+	3189	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	18	-304	intron_retention	FALSE	canonical	3	416	junction_6	49.0595556441352	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25162507	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.14	chr2	+	3677	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	18	-304	intron_retention	FALSE	canonical	3	416	junction_5	44.7755513645561	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25162507	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.15	chr2	+	3726	10	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	20	-2	intron_retention	FALSE	canonical	3	416	junction_5	51.0555253294554	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTGTGGCATCTG	NA	False	NA	16	True	ATTAAA	-17	NA	25162509	25175925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.16	chr2	+	2492	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	21	-309	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	143.802320697604	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGTATTTTGTTGGA	NA	False	NA	29	True	ATTAAA	-16	NA	25162510	25175618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.18	chr2	+	3198	11	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-314	intron_retention	FALSE	canonical	0	0	junction_5	151.388771049903	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTTCATGTATTTTG	NA	False	NA	24	True	ATTAAA	-11	NA	25162513	25175613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168310_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.19	chr2	+	2599	14	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	134.88539952833	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25162513	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262_25175413_25175489
ES.18514.2	chr2	+	2886	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	-77	-22	-77	22	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCAGTCTGAGAACAA	NA	False	NA	36	True	AATAAA	-38	NA	25152552	25159919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
ES.18514.20	chr2	+	2408	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-314	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	194.582527478702	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTTCATGTATTTTG	NA	False	NA	24	True	ATTAAA	-11	NA	25162513	25175613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25169183_25169326_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.21	chr2	+	2527	13	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-314	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	135.69563572774	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTTCATGTATTTTG	NA	False	NA	24	True	ATTAAA	-11	NA	25162513	25175613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162690_25162926_25163411_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.22	chr2	+	4721	8	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-306	intron_retention	FALSE	canonical	3	416	junction_3	51.8974656296	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTATTTTGTTGGATCC	NA	False	NA	32	True	ATTAAA	-19	NA	25162513	25175621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25164853_25166327_25166448_25167647_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.23	chr2	+	2922	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	-303	intron_retention	FALSE	canonical	3	410	junction_2	50.9670125045246	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	35	True	ATTAAA	-22	NA	25162513	25175624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.24	chr2	+	3487	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	24	0	intron_retention	FALSE	canonical	3	416	junction_6	49.0595556441352	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTGGCATCTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	25162513	25175927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25175185_25175262
ES.18514.25	chr2	+	2834	13	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	135.69563572774	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTGTGGCATCTG	NA	False	NA	16	True	ATTAAA	-17	NA	25162518	25175925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162690_25162926_25163411_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.26	chr2	+	2624	13	NNC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	32	-309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.277997799607	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGTATTTTGTTGGA	NA	False	NA	29	True	ATTAAA	-16	NA	25162521	25175618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25162651_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.27	chr2	+	4200	10	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	36	0	intron_retention	FALSE	canonical	3	416	junction_4	46.0453346117299	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTGGCATCTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	25162525	25175927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.28	chr2	+	3449	10	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	-52	-303	intron_retention	FALSE	canonical	2	5	junction_4	158.629158342794	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGGATCCCAT	NA	False	NA	35	True	ATTAAA	-22	NA	25162554	25175624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25162690_25162926_25164853_25166327_25166448_25167647_25167766_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.29	chr2	+	2493	12	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	436	312	319	-312	3prime_fragment	FALSE	canonical	3	410	junction_1	50.7055998015966	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTCATGTATTTTGTT	NA	False	NA	26	True	ATTAAA	-13	NA	25162925	25175615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.3	chr2	+	2421	5	NNC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.4452335813094	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGCCTTCTTTACA	NA	False	NA	15	True	AATAAA	-17	NA	25152594	25159898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25152764_25153165_25154566_25158843_25159058_25159144_25159252_25159367
ES.18514.30	chr2	+	3774	3	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	2034	108	intron_retention	FALSE	canonical	3	516	junction_2	4	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGGGTAGCATAGCTG	NA	False	NA	NA	False	AATAGA	-18	NA	25165523	25170577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25166448_25167647_25170215_25170294
ES.18514.31	chr2	+	5741	6	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	-1329	-304	intron_retention	FALSE	canonical	3	416	junction_2	56.8	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25167675	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25175185_25175262
ES.18514.32	chr2	+	5919	5	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	-521	-309	intron_retention	FALSE	canonical	3	448	junction_1	48.8997699381091	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGTATTTTGTTGGA	NA	False	NA	29	True	ATTAAA	-16	NA	25168483	25175618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25169326_25170138_25170215_25170294_25174704_25174948_25175185_25175262
ES.18514.33	chr2	+	3894	1	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	2725	-304	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25171729	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25171700_25175600
ES.18514.4	chr2	+	5145	15	Fusion	ENSMUSG00000048707.10_ENSMUSG00000026965.13	novel	555	5	NA	NA	-5	-309	intron_retention	TRUE	canonical	0	0	junction_4	195.193938095904	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGTATTTTGTTGGA	NA	False	NA	29	True	ATTAAA	-16	NA	25152624	25175618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367_25159469_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168310_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.5	chr2	+	2677	5	NNC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	66.299981146302	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGCTGCTTTTGCCTT	NA	False	NA	8	True	AATAAA	-10	NA	25152624	25159891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367_25159469_25159577
ES.18514.6	chr2	+	2880	3	NIC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	-5	1	intron_retention	FALSE	canonical	3	142	junction_1	10	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGCCTTCTTTACA	NA	False	NA	15	True	AATAAA	-17	NA	25152624	25159898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25154566_25158843_25159252_25159367
ES.18514.7	chr2	+	2751	4	NNC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	71.1805216802087	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152634	25159897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25154566_25158843_25159027_25159144_25159252_25159367
ES.18514.8	chr2	+	3974	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	-775	-304	intron_retention	FALSE	canonical	3	416	junction_5	48.4392402913175	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGTTGGATCCCA	NA	False	NA	34	True	ATTAAA	-21	NA	25161714	25175623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18514.9	chr2	+	2982	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	-278	300	-278	-300	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTGGATCCCATGAA	NA	False	NA	38	True	ATTAAA	-25	NA	25162211	25175627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ES.18515.1	chr2	-	883	1	Intergenic	novelGene_15383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25156451	25155568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25155600_25156500
ES.18516.1	chr2	-	1204	2	FSM	ENSMUSG00000026966.7	ENSMUST00000127176.2	530	2	-8	-666	-2	-1	multi-exon	FALSE	canonical	3	707	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTGCTAGCTACC	NA	False	NA	-7	True	AATAAA	-15	NA	25162424	25161051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25162141_25162309
ES.18516.2	chr2	-	883	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	-22	1	0	-1	multi-exon	FALSE	canonical	3	707	junction_2	68	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTGCTAGCTACC	NA	False	NA	-7	True	AATAAA	-15	NA	25162450	25161051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25161594_25161940_25162141_25162309
ES.18516.4	chr2	-	830	3	NNC	ENSMUSG00000026966.7	novel	862	3	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	421	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTCTGCTAGCT	NA	False	NA	-10	True	AATAAA	-12	NA	25162377	25161054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25161594_25161940_25162164_25162309
ES.18516.5	chr2	-	1349	1	NIC	ENSMUSG00000026966.7	novel	845	3	NA	NA	13	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTCTGCTAGCT	NA	False	NA	-10	True	AATAAA	-12	NA	25162403	25161054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25161100_25162400
ES.18516.6	chr2	-	720	3	NNC	ENSMUSG00000026966.7	novel	845	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	18	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTCTGCTAGCT	NA	False	NA	-10	True	AATAAA	-12	NA	25162415	25161054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25161594_25162054_25162141_25162320
ES.18516.7	chr2	-	867	3	NNC	ENSMUSG00000026966.7	novel	862	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	352	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTCTGCTAGCT	NA	False	NA	-10	True	AATAAA	-12	NA	25162415	25161054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25161594_25161918_25162141_25162309
ES.18516.8	chr2	-	860	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	-20	5	8	-5	multi-exon	FALSE	canonical	3	46	junction_2	398.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTGTGTCTGCTAGC	NA	False	NA	-11	True	AATAAA	-11	NA	25162442	25161055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25161594_25161940_25162141_25162320
ES.18517.1	chr2	-	3513	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114308.10	4165	20	7567	-4	-6131	4	3prime_fragment	FALSE	canonical	1	3	junction_1	6.67990222608086	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTTTGTCTATTGTTGA	9861	False	NA	0	True	NA	NA	NA	25201540	25181188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25182497_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.10	chr2	-	2639	16	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7584	4160	-6114	-3283	internal_fragment	FALSE	canonical	3	19	junction_2	4.55289895439037	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGTGTGGATTTGTGG	9878	False	NA	NA	False	NA	NA	NA	25201523	25185352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.11	chr2	-	180	1	Antisense	novelGene_ENSMUSG00000085830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATCTGAAAAATAA	7692	False	NA	NA	False	NA	NA	NA	25189099	25188919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_25188900_25189100
ES.18517.12	chr2	-	4943	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7586	8396	-6112	3904	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTCAGTTCCCAGCAC	9880	False	NA	NA	False	NA	NA	NA	25201521	25189588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.13	chr2	-	3955	7	NNC	ENSMUSG00000026959.14	novel	731	3	NA	NA	-6136	3006	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.1055541659718	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9856	False	NA	NA	False	NA	NA	NA	25201545	25190486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25191030_25191143_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.14	chr2	-	3589	1	NIC	ENSMUSG00000026959.14	novel	3920	21	NA	NA	535	2504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCAGGCAATGGTGAC	2214	False	NA	NA	False	NA	NA	NA	25194577	25190988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25191000_25194600
ES.18517.16	chr2	-	3483	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7588	9854	-6110	2446	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9882	False	NA	NA	False	NA	NA	NA	25201519	25191046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.17	chr2	-	3465	6	NNC	ENSMUSG00000026959.14	novel	4165	20	NA	NA	-6161	2425	intron_retention	FALSE	canonical	0	0	junction_5	11.916375287813	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	9831	False	NA	NA	False	NA	NA	NA	25201570	25191067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25193822_25193918_25194064_25195049_25195419_25200386_25200488_25201354_25201418_25201537
ES.18517.18	chr2	-	3380	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7545	10000	-6153	2300	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	9839	False	NA	NA	False	NA	NA	NA	25201562	25191192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.19	chr2	-	1920	6	ISM	ENSMUSG00000026959.14	ENSMUST00000114318.10	3920	21	7575	11430	-6123	870	internal_fragment	FALSE	canonical	3	22	junction_5	4.58693797647189	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGGGAGAGAGGGGGTC	9869	False	NA	NA	False	NA	NA	NA	25201532	25192622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.2	chr2	-	3629	18	ISM	ENSMUSG00000026959.14	ENSMUST00000114310.10	4276	21	7562	-4	-6136	4	3prime_fragment	FALSE	canonical	2	8	junction_2	6.39852924277042	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTTTGTCTATTGTTGA	9856	False	NA	0	True	NA	NA	NA	25201545	25181188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.3	chr2	-	3139	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114317.10	3809	20	7585	-4	-6113	4	3prime_fragment	FALSE	canonical	3	13	junction_1	5.11699069278028	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTTTGTCTATTGTTGA	9879	False	NA	0	True	NA	NA	NA	25201522	25181188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.4	chr2	-	4989	3	NIC	ENSMUSG00000026959.14	novel	4127	19	NA	NA	10	0	intron_retention	FALSE	canonical	3	19	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9942	False	NA	-4	True	NA	NA	NA	25186681	25181192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25185950_25186036_25186147_25186559
ES.18517.5	chr2	-	3286	18	NIC	ENSMUSG00000026959.14	novel	3920	21	NA	NA	-6156	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.78428903043448	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9836	False	NA	-4	True	NA	NA	NA	25201565	25181192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25182138_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.6	chr2	-	3584	18	NNC	ENSMUSG00000026959.14	novel	4276	21	NA	NA	-6107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.1682141979377	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9885	False	NA	-4	True	NA	NA	NA	25201516	25181192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188314_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
ES.18517.7	chr2	-	3781	9	NIC	ENSMUSG00000026959.14	novel	4238	20	NA	NA	-1274	0	intron_retention	FALSE	canonical	2	10	junction_1	4.80722113075735	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	8826	False	NA	-4	True	NA	NA	NA	25187965	25181192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25182497_25184449_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799
ES.18517.8	chr2	-	2688	10	NIC	ENSMUSG00000026959.14	novel	3838	19	NA	NA	-1971	0	intron_retention	FALSE	canonical	3	13	junction_1	4.13058451009802	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	8129	False	NA	-4	True	NA	NA	NA	25188662	25181192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25188326_25188405
ES.18518.1	chr2	-	169	1	ISM	ENSMUSG00000026959.14	ENSMUST00000144402.2	3024	2	4103	491	4035	-491	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGGGCCTCAGAGG	9558	False	NA	NA	False	NA	NA	NA	25205072	25204903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25204900_25205100
ES.18519.1	chr2	-	5938	2	Antisense	novelGene_ENSMUSG00000036646.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTGTGTGCATCTAT	5831	False	NA	NA	False	NA	NA	NA	25222608	25213244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_25218734_25222159
ES.18519.2	chr2	-	171	1	Intergenic	novelGene_15384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	8716	False	NA	NA	False	NA	NA	NA	25219723	25219552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25219600_25219700
ES.18519.3	chr2	-	803	1	Antisense	novelGene_ENSMUSG00000036646.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTTTGAGGTCTGC	5859	False	NA	NA	False	NA	NA	NA	25222580	25221777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_25221800_25222600
ES.1852.1	chr1	-	5458	12	Fusion	ENSMUSG00000038473.15_ENSMUSG00000102752.2	novel	3022	10	NA	NA	33	4	multi-exon	FALSE	canonical	0	0	junction_1	1.16420440680597	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTCTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	170417385	170125763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_170129211_170130079_170130408_170146306_170146460_170147990_170148157_170155101_170155267_170156709_170156877_170165681_170165824_170176963_170177073_170202816_170202876_170218299_170218393_170342183_170342256_170416828
ES.1852.2	chr1	-	5497	12	Fusion	ENSMUSG00000038473.15_ENSMUSG00000102752.2	novel	3022	10	NA	NA	3	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.16420440680597	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTGGCTTGTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	170417415	170125769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_170129211_170130079_170130408_170146306_170146460_170147990_170148157_170155086_170155267_170156709_170156877_170165681_170165824_170176963_170177073_170202816_170202876_170218299_170218393_170342183_170342256_170416828
ES.1852.3	chr1	-	204	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	170142493	170142289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_170142300_170142500
ES.1852.4	chr1	-	4979	10	FSM	ENSMUSG00000038473.15	ENSMUST00000160456.8	3022	10	29	-1986	17	1986	multi-exon	FALSE	canonical	0	0	junction_2	1.22726233524303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTCCCATTGTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	170417401	170143041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170146460_170147990_170148157_170155086_170155267_170156709_170156877_170165681_170165824_170176963_170177073_170202816_170202876_170218299_170218393_170342183_170342256_170416828
ES.1852.5	chr1	-	3010	10	FSM	ENSMUSG00000038473.15	ENSMUST00000160456.8	3022	10	0	12	0	-12	multi-exon	FALSE	canonical	0	0	junction_2	1.22726233524303	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGAAATGGATGTA	NA	False	NA	NA	False	NA	NA	NA	170417430	170145039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170146460_170147990_170148157_170155086_170155267_170156709_170156877_170165681_170165824_170176963_170177073_170202816_170202876_170218299_170218393_170342183_170342256_170416828
ES.1852.6	chr1	-	1625	8	FSM	ENSMUSG00000038473.15	ENSMUST00000161966.8	1607	8	25	-43	25	43	multi-exon	FALSE	canonical	0	0	junction_3	1.29362644830535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTCGCTCTGAATTAGG	NA	False	NA	NA	False	NA	NA	NA	170417393	170154848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170155267_170156709_170156877_170165681_170165824_170176963_170177073_170202816_170202876_170218299_170218393_170342183_170342256_170416828
ES.18520.1	chr2	+	3980	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	105.980213037885	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3954	False	NA	33	True	ATTAAA	-21	NA	25222729	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.11	chr2	+	4208	10	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	6	junction_3	120.475703200805	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTGTGTGCAGTGTTA	3986	False	NA	29	True	ATTAAA	-17	NA	25222761	25242220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25231618_25231729_25233235_25233422_25234979_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.12	chr2	+	2662	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	21	1072	-12	-1072	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGGTATAATGTGATC	3986	False	NA	8	True	AGTAAA	-19	NA	25222761	25241152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.13	chr2	+	4290	12	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	10	junction_7	110.565712856672	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	3986	False	NA	31	True	ATTAAA	-19	NA	25222761	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.14	chr2	+	3579	12	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	113.156441112688	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	3986	False	NA	31	True	ATTAAA	-19	NA	25222761	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25235421_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.15	chr2	+	3900	11	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-7	intron_retention	FALSE	canonical	0	0	junction_7	176.325522826391	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAAGCTGTGTGCAGTG	3986	False	NA	26	True	ATTAAA	-14	NA	25222761	25242217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25231618_25231729_25233235_25233422_25234979_25235129_25235421_25235607_25238059_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.16	chr2	+	3590	12	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	110.447399694033	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3986	False	NA	33	True	ATTAAA	-21	NA	25222761	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239368_25240373
ES.18520.17	chr2	+	4078	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	302	junction_8	32.9823393764572	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3986	False	NA	33	True	ATTAAA	-21	NA	25222761	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.18	chr2	+	4845	11	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	23	junction_10	109.202060420122	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAAGCTGTGTGCAGTG	3987	False	NA	26	True	ATTAAA	-14	NA	25222762	25242217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239466
ES.18520.19	chr2	+	3539	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	111.452617512615	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3990	False	NA	33	True	ATTAAA	-21	NA	25222765	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.2	chr2	+	3747	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	8	0	8	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3973	False	NA	33	True	ATTAAA	-21	NA	25222748	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.20	chr2	+	3571	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	109.176481589358	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	3992	False	NA	31	True	ATTAAA	-19	NA	25222767	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.21	chr2	+	2999	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-6	-1073	intron_retention	FALSE	canonical	3	302	junction_8	32.9823393764572	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGTATAATGTGAT	3992	False	NA	7	True	AGTAAA	-18	NA	25222767	25241151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.25	chr2	+	2659	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	-1077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.29842033947	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATACCCTGGTATAATG	3993	False	NA	3	True	AGTAAA	-14	NA	25222768	25241147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224514_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.27	chr2	+	3957	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	108.276267020987	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3993	False	NA	33	True	ATTAAA	-21	NA	25222768	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238469_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.28	chr2	+	3709	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	106.717565980905	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAAGCTGTGTGCAGTG	3993	False	NA	26	True	ATTAAA	-14	NA	25222768	25242217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239473_25239595_25240373
ES.18520.29	chr2	+	5437	11	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	-1075	intron_retention	FALSE	canonical	3	351	junction_8	24.4681425531241	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACCCTGGTATAATGTG	3993	False	NA	5	True	AGTAAA	-16	NA	25222768	25241149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.3	chr2	+	4380	11	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	302	junction_7	33.9022123171925	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3973	False	NA	33	True	ATTAAA	-21	NA	25222748	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.30	chr2	+	3580	14	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	104.397907435557	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3993	False	NA	33	True	ATTAAA	-21	NA	25222768	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373_25240996_25241142
ES.18520.31	chr2	+	3690	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.29842033947	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	3998	False	NA	31	True	ATTAAA	-19	NA	25222773	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224467_25228116_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.32	chr2	+	3816	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.141689375335	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTGTGTGCAGTGTTA	3999	False	NA	29	True	ATTAAA	-17	NA	25222774	25242220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222874_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.33	chr2	+	3734	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	107.067313976873	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	4000	False	NA	33	True	ATTAAA	-21	NA	25222775	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224374_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.35	chr2	+	3627	14	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	104.397907435557	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	4004	False	NA	31	True	ATTAAA	-19	NA	25222779	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373_25241715_25241801
ES.18520.36	chr2	+	3421	11	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	147.938635927198	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	4700	False	NA	33	True	ATTAAA	-21	NA	25223475	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239106_25239380_25240373
ES.18520.37	chr2	+	5975	8	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-1444	-5	intron_retention	FALSE	canonical	0	0	junction_1	163.240401161687	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCTGTGTGCAGTGTT	1257	False	NA	28	True	ATTAAA	-16	NA	25226680	25242219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25228760_25231467_25231729_25233235_25233422_25234979_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240383
ES.18520.38	chr2	+	159	1	Intergenic	novelGene_15385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATAAATAAATCT	3670	False	NA	NA	False	NA	NA	NA	25229093	25229252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25229100_25229300
ES.18520.39	chr2	+	5930	1	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	1286	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	NA	False	NA	33	True	ATTAAA	-21	NA	25236294	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25236300_25242200
ES.18520.40	chr2	+	3178	4	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	2696	-2	intron_retention	FALSE	canonical	3	351	junction_1	25.3113940087595	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTGCAGTGTTACT	NA	False	NA	31	True	ATTAAA	-19	NA	25237704	25242222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.5	chr2	+	4851	4	NIC	ENSMUSG00000036646.14	novel	2030	6	NA	NA	9	-1062	intron_retention	FALSE	canonical	3	358	junction_3	24.0878023535196	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAATCCAAGTATTTTT	3974	False	NA	NA	False	AAAAAG	-5	NA	25222749	25232230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25228280_25231618
ES.18520.6	chr2	+	3660	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.540666981961	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3979	False	NA	33	True	ATTAAA	-21	NA	25222754	25242224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238158_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.7	chr2	+	2877	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-14	-1073	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	105.980213037885	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGTATAATGTGAT	3984	False	NA	7	True	AGTAAA	-18	NA	25222759	25241151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ES.18520.9	chr2	+	3922	11	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	6	junction_3	114.463138171203	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCAGTGTTACTT	3986	False	NA	32	True	ATTAAA	-20	NA	25222761	25242223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
ES.18521.1	chr2	-	1601	13	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	16728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.440557323999	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAGCCAAAGGCTTT	9015	False	NA	NA	False	NA	NA	NA	25246357	25225559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25225617_25242306_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.10	chr2	-	1751	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	250	junction_10	26.9793309316718	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9007	False	NA	-17	True	AATAAA	-17	NA	25246365	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25246155_25246242
ES.18521.11	chr2	-	3043	8	FSM	ENSMUSG00000026958.14	ENSMUST00000139971.8	3017	8	-29	3	-1	0	multi-exon	FALSE	canonical	3	252	junction_5	30.9073665348966	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9000	False	NA	-17	True	AATAAA	-17	NA	25246372	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25242579_25242697_25242769_25243164_25244306_25244479_25244647_25244752_25244835_25244904_25245966_25246040_25246155_25246242
ES.18521.12	chr2	-	2273	11	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	252	junction_7	26.5488229494266	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9008	False	NA	-17	True	AATAAA	-17	NA	25246364	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245966_25246040_25246155_25246242
ES.18521.13	chr2	-	1761	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	252	junction_8	26.779479006653	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9013	False	NA	-18	True	AATAAA	-16	NA	25246359	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245966_25246040_25246155_25246242
ES.18521.14	chr2	-	3442	4	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	281	junction_3	23.8467328300266	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9007	False	NA	-18	True	AATAAA	-16	NA	25246365	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25244647_25244752
ES.18521.15	chr2	-	3160	6	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	250	junction_4	34.0141147172758	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9025	False	NA	-18	True	AATAAA	-16	NA	25246347	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040
ES.18521.17	chr2	-	3637	5	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	252	junction_3	31.7755802464723	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9050	False	NA	-18	True	AATAAA	-16	NA	25246322	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25244835_25244904_25246155_25246242
ES.18521.18	chr2	-	2162	7	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_5	114.622569040016	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9025	False	NA	-18	True	AATAAA	-16	NA	25246347	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25244306_25244479_25244647_25244752_25245041_25246040_25246155_25246242
ES.18521.19	chr2	-	4061	1	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCTAGTAGGATCCAT	9009	False	NA	-18	True	AATAAA	-16	NA	25246363	25242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242300_25246400
ES.18521.2	chr2	-	1683	13	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	77.1237731759079	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCATGCATGGAAGGATG	9025	False	NA	-5	True	AATAAA	-29	NA	25246347	25242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25242579_25242697_25242782_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.23	chr2	-	3206	7	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	252	junction_4	32.1804806262016	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9009	False	NA	-19	True	AATAAA	-15	NA	25246363	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25244647_25244752_25244835_25244904_25245966_25246040_25246155_25246242
ES.18521.24	chr2	-	2158	10	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	44	junction_4	80.7911497414365	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245966_25246040_25246155_25246242
ES.18521.25	chr2	-	3567	3	NNC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	10	junction_2	164.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9000	False	NA	-19	True	AATAAA	-15	NA	25246372	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25242579_25242697_25242782_25243164
ES.18521.26	chr2	-	1819	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	7	-2	intron_retention	FALSE	canonical	3	250	junction_9	27.9852381394014	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9036	False	NA	-19	True	AATAAA	-15	NA	25246336	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.27	chr2	-	3609	6	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	252	junction_3	32.964223030431	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9002	False	NA	-19	True	AATAAA	-15	NA	25246370	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25244835_25244904_25245966_25246040_25246155_25246242
ES.18521.28	chr2	-	3500	6	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	252	junction_4	32.2577122561412	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244306_25244479_25244647_25244752_25244835_25244904_25245966_25246040
ES.18521.29	chr2	-	2485	9	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	250	junction_7	30.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25245734_25245825_25245966_25246040
ES.18521.3	chr2	-	1712	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	-20	-10	-20	-4	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATCCATGCATGGAAGGA	8981	False	NA	-7	True	AATAAA	-27	NA	25246391	25242291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.30	chr2	-	2991	8	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	252	junction_4	28.4124146478691	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9000	False	NA	-19	True	AATAAA	-15	NA	25246372	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25243529_25243619_25244647_25244752_25244835_25244904_25245041_25245569_25245966_25246040_25246155_25246242
ES.18521.31	chr2	-	1916	11	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_5	89.4362901735084	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243755_25244244_25244647_25244752_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.32	chr2	-	3055	8	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	250	junction_5	32.9922687294822	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9068	False	NA	-19	True	AATAAA	-15	NA	25246304	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25244647_25244752_25244835_25244904_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.33	chr2	-	1695	11	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	44	junction_3	76.7408626482658	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9009	False	NA	-19	True	AATAAA	-15	NA	25246363	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243529_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.35	chr2	-	1461	12	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.2438408138337	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTCTAGTAGGATCCA	9025	False	NA	-19	True	AATAAA	-15	NA	25246347	25242303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243453_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.37	chr2	-	3746	4	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	2	-3	intron_retention	FALSE	canonical	3	281	junction_2	23.9072281027215	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTAGTAGGATCC	9009	False	NA	-20	True	AATAAA	-14	NA	25246363	25242304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25246155_25246242
ES.18521.38	chr2	-	2764	6	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	1	-4	intron_retention	FALSE	canonical	3	253	junction_3	31.7767210391507	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTCTAGTAGGATC	9002	False	NA	-21	True	AATAAA	-13	NA	25246370	25242305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243739_25244244_25244306_25244479_25244647_25244752
ES.18521.39	chr2	-	3578	6	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	2	-4	intron_retention	FALSE	canonical	3	250	junction_3	33.3766385365573	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTCTAGTAGGATC	9009	False	NA	-21	True	AATAAA	-13	NA	25246363	25242305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.4	chr2	-	2500	10	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	250	junction_7	29.4957624075053	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9005	False	NA	-17	True	AATAAA	-17	NA	25246367	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243529_25243619_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.40	chr2	-	3786	4	NIC	ENSMUSG00000026958.14	novel	3017	8	NA	NA	-20	-4	intron_retention	FALSE	canonical	3	252	junction_3	36.1693547388148	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTCTAGTAGGATC	8981	False	NA	-21	True	AATAAA	-13	NA	25246391	25242305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25245966_25246040
ES.18521.41	chr2	-	1377	11	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	88.0156804211613	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTGTCTAGTAGGAT	9025	False	NA	-22	True	AATAAA	-12	NA	25246347	25242306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.42	chr2	-	2301	11	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	250	junction_8	28.3577149996258	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTGTCTAGTAGGAT	9025	False	NA	-22	True	AATAAA	-12	NA	25246347	25242306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.5	chr2	-	3943	2	FSM	ENSMUSG00000026958.14	ENSMUST00000149953.2	466	2	-3477	0	2	0	multi-exon	FALSE	canonical	3	339	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9009	False	NA	-17	True	AATAAA	-17	NA	25246363	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25242579_25242697
ES.18521.6	chr2	-	1620	13	NNC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.7088326518825	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9002	False	NA	-17	True	AATAAA	-17	NA	25246370	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243678_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.7	chr2	-	2413	10	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	250	junction_7	29.6498079439161	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9009	False	NA	-17	True	AATAAA	-17	NA	25246363	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.8	chr2	-	2711	11	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	250	junction_8	28.3837981954495	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9007	False	NA	-17	True	AATAAA	-17	NA	25246365	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245734_25245825_25245966_25246040_25246155_25246242
ES.18521.9	chr2	-	3075	7	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	10	junction_5	104.867641444929	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9009	False	NA	-17	True	AATAAA	-17	NA	25246363	25242301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25242579_25242697_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245821_25245966_25246040
ES.18522.1	chr2	+	726	2	Intergenic	novelGene_15386	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	3183	False	NA	NA	False	NA	NA	NA	25246426	25247585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25246625_25247057
ES.18522.2	chr2	+	1585	1	Intergenic	novelGene_15388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATGTGTTTGCCTGTG	3184	False	NA	NA	False	ATTAAA	-17	NA	25246427	25248012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25246400_25248000
ES.18522.3	chr2	+	1195	2	Intergenic	novelGene_15387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTATGTGTTTGCC	3184	False	NA	NA	False	ATTAAA	-13	NA	25246427	25248008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25247559_25247944
ES.18523.1	chr2	-	200	1	Intergenic	novelGene_15389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTTTCATGTCACAGT	6891	False	NA	NA	False	NA	NA	NA	25248481	25248281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25248300_25248500
ES.18524.1	chr2	-	1764	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	0	1585	0	15	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTTTGTTTTTG	NA	False	NA	0	True	NA	NA	NA	25255694	25251485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.10	chr2	-	1751	8	NNC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	9	junction_6	155.483971219295	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255639	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254700_25255071_25255098_25255338
ES.18524.11	chr2	-	3600	4	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	442	junction_3	11.8415464455544	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255637	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25254012_25254112_25254700_25254892_25255098_25255338
ES.18524.12	chr2	-	2355	7	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	25	-1	intron_retention	FALSE	canonical	3	414	junction_3	22.4028767993954	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255669	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254700_25254892_25255098_25255338
ES.18524.13	chr2	-	1682	9	NNC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	150.135303559822	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255649	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25251752_25252082_25252150_25252674_25252841_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.14	chr2	-	1940	8	NNC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	222.58343998398	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255634	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25251752_25252082_25252150_25252661_25252857_25253251_25253397_25253817_25254012_25254112_25254700_25254890_25255098_25255338
ES.18524.15	chr2	-	2507	6	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	414	junction_3	24.5389486327349	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255628	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25255098_25255338
ES.18524.16	chr2	-	2540	7	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	23	-1	intron_retention	FALSE	canonical	3	427	junction_4	18.6077940659284	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255671	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.17	chr2	-	4034	2	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	471	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255637	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25254012_25254112
ES.18524.18	chr2	-	1547	9	NNC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	216.271205607681	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255658	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253323_25253397_25253817_25254012_25254112_25254286_25254440_25254700_25255071_25255098_25255338
ES.18524.19	chr2	-	3498	4	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	21	-1	intron_retention	FALSE	canonical	3	442	junction_3	17.2111075245674	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255673	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25254012_25254112_25255098_25255338
ES.18524.2	chr2	-	1747	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	19	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	144.070241115228	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTGTCTATTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	25255675	25251496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252661_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.20	chr2	-	3384	5	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	427	junction_2	16.3248277173145	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGATTGTCTGTCTAT	NA	False	NA	-18	True	NA	NA	NA	25255660	25251503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.22	chr2	-	2081	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	414	junction_3	22.9889059313045	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCTGATTGTCTGTC	NA	False	NA	-21	True	NA	NA	NA	25255637	25251506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.23	chr2	-	1658	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	188.570900127777	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCTGATTGTCTGTC	NA	False	NA	-21	True	NA	NA	NA	25255664	25251506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252661_25252861_25253323_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.24	chr2	-	2469	7	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	362	junction_2	40.4268887416943	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGATTGTCTGT	NA	False	NA	-22	True	NA	NA	NA	25255658	25251507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252861_25253255_25253397_25253817_25254012_25254112_25254700_25254892_25255098_25255338
ES.18524.25	chr2	-	2130	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	20	-2	intron_retention	FALSE	canonical	3	14	junction_2	153.769506809672	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGATTGTCTGT	NA	False	NA	-22	True	NA	NA	NA	25255674	25251507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252661_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.26	chr2	-	2144	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	18	junction_2	152.384583290075	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCTGATTGTCTG	NA	False	NA	-23	True	NA	NA	NA	25255640	25251508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252861_25253323_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.3	chr2	-	1586	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	159.624303811628	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255674	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.4	chr2	-	1886	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	362	junction_3	38.5206014321412	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255640	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25255098_25255338
ES.18524.5	chr2	-	3305	4	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	414	junction_2	30.0998338865848	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255660	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25253397_25253817_25254012_25254112
ES.18524.7	chr2	-	3030	5	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	427	junction_3	17.8955301681733	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255637	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25252150_25252674_25254012_25254112_25254286_25254523_25255098_25255338
ES.18524.8	chr2	-	2715	6	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	414	junction_2	23.9048112312145	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255641	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25253397_25253817_25254286_25254523_25254700_25254892_25255098_25255338
ES.18524.9	chr2	-	3063	6	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	25	-1	intron_retention	FALSE	canonical	3	427	junction_3	19.9539469779791	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTGTCTGTCTATT	NA	False	NA	-17	True	NA	NA	NA	25255669	25251502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25251752_25252082_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ES.18525.1	chr2	+	179	1	Intergenic	novelGene_15390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	295	False	NA	NA	False	NA	NA	NA	25255970	25256149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25256000_25256100
ES.18526.1	chr2	+	160	2	Intergenic	novelGene_15391	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	2110	False	NA	NA	False	NA	NA	NA	25257785	25258050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25257890_25257994
ES.18526.2	chr2	+	279	1	Intergenic	novelGene_15393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATCCAA	2111	False	NA	NA	False	NA	NA	NA	25257786	25258065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25257800_25258100
ES.18526.3	chr2	+	173	1	Intergenic	novelGene_15392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAAGAAGCTC	2111	False	NA	NA	False	NA	NA	NA	25257786	25257959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25257800_25258000
ES.18527.1	chr2	+	3066	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-25	-700	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGCTCGGCAGTGTCA	6632	False	NA	32	True	NA	NA	NA	25262307	25267525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.10	chr2	+	3055	3	NIC	ENSMUSG00000026955.14	novel	1761	4	NA	NA	7	681	intron_retention	FALSE	canonical	3	11	junction_1	55	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6677	False	NA	3	True	NA	NA	NA	25262352	25267496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25264963_25265844_25265979
ES.18527.11	chr2	+	4716	2	ISM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	29	731	-10	679	intron_retention	FALSE	canonical	3	106	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGCACGTCTGCATC	6686	False	NA	1	True	NA	NA	NA	25262361	25267494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25263011_25263427
ES.18527.12	chr2	+	2438	6	ISM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	29	731	-10	679	intron_retention	FALSE	canonical	3	90	junction_3	9.97196068985433	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGCACGTCTGCATC	6686	False	NA	1	True	NA	NA	NA	25262361	25267494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175
ES.18527.13	chr2	+	2428	5	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	105	junction_2	5.11737237261468	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6693	False	NA	3	True	AGTAAA	-12	NA	25262368	25266812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25263427_25263530_25264963_25266088_25266175_25266287_25266363
ES.18527.14	chr2	+	5052	2	NIC	ENSMUSG00000026955.14	novel	791	3	NA	NA	-3	682	intron_retention	FALSE	canonical	3	118	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACGTCTGCATCTTT	6693	False	NA	4	True	NA	NA	NA	25262368	25267497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25266287_25266363
ES.18527.15	chr2	+	1646	5	ISM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	28	3	-2	0	intron_retention	FALSE	canonical	3	11	junction_1	43.0290599479003	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6694	False	NA	3	True	AGTAAA	-12	NA	25262369	25266812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175
ES.18527.16	chr2	+	2911	7	NNC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-2	684	intron_retention	FALSE	canonical	0	0	junction_3	52.693031375653	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACGTCTGCATCTTTTA	6694	False	NA	6	True	NA	NA	NA	25262369	25267499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25263011_25263427_25263537_25264963_25265623_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.17	chr2	+	1621	7	NNC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	41.0423223297881	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6696	False	NA	3	True	AGTAAA	-12	NA	25262371	25266812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25263011_25263427_25263530_25264963_25265077_25265744_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.18	chr2	+	1619	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	31	-50	1	50	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTGCCCTGTCTTACC	6697	False	NA	56	True	GGGGCT	-16	NA	25262372	25266865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.19	chr2	+	5127	1	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	1	684	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACGTCTGCATCTTTTA	6697	False	NA	6	True	NA	NA	NA	25262372	25267499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25262400_25267500
ES.18527.2	chr2	+	3203	4	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-22	685	intron_retention	FALSE	canonical	3	105	junction_2	7.31816613336672	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGTCTGCATCTTTTAA	6635	False	NA	7	True	NA	NA	NA	25262310	25267500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979
ES.18527.20	chr2	+	2271	6	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	22	1	intron_retention	FALSE	canonical	3	105	junction_2	6.41872261435249	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGTATTTCTCATAAT	6718	False	NA	7	True	AGTAAA	-16	NA	25262393	25266816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.21	chr2	+	2223	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	58	-681	28	681	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6724	False	NA	3	True	NA	NA	NA	25262399	25267496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.22	chr2	+	2922	6	NNC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	58	681	intron_retention	FALSE	canonical	3	5	junction_2	43.831495525478	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCACGTCTGCATCTT	6754	False	NA	3	True	NA	NA	NA	25262429	25267496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25263011_25263427_25263537_25264963_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.23	chr2	+	4001	4	NIC	ENSMUSG00000026955.14	novel	1600	6	NA	NA	138	-1	intron_retention	FALSE	canonical	3	110	junction_2	4.64279609239471	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGGGCTGTATTTCTC	6834	False	NA	2	True	AGTAAA	-11	NA	25262509	25266811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.24	chr2	+	3718	1	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	721	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGGGCTGTATTTCT	463	False	NA	1	True	AGTAAA	-10	NA	25263092	25266810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263100_25266800
ES.18527.3	chr2	+	3448	5	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-21	679	intron_retention	FALSE	canonical	3	105	junction_1	6.34428877022476	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCAGCACGTCTGCATC	6636	False	NA	1	True	NA	NA	NA	25262311	25267494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.4	chr2	+	1724	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	-14	1411	-14	-1	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCTGTATTTCTCATA	6643	False	NA	5	True	AGTAAA	-14	NA	25262318	25266814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.5	chr2	+	1797	6	ISM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	-12	1413	-12	0	intron_retention	FALSE	canonical	3	90	junction_3	9.97196068985433	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6645	False	NA	3	True	AGTAAA	-12	NA	25262320	25266812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175
ES.18527.6	chr2	+	2415	5	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	105	junction_2	6.34428877022476	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	6647	False	NA	3	True	AGTAAA	-12	NA	25262322	25266812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263011_25263427_25263530_25264963_25265844_25265979_25266088_25266175
ES.18527.7	chr2	+	2761	5	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-9	4	intron_retention	FALSE	canonical	3	105	junction_1	6.34428877022476	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATTTCTCATAATGCC	6648	False	NA	10	True	AGTAAA	-19	NA	25262323	25266819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263530_25264963_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.8	chr2	+	2420	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	2	699	2	-699	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTCGGCAGTGTCAT	6659	False	NA	33	True	NA	NA	NA	25262334	25267526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ES.18527.9	chr2	+	3502	4	NIC	ENSMUSG00000026955.14	novel	3121	7	NA	NA	-1	685	intron_retention	FALSE	canonical	3	105	junction_1	6.68331255192114	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGTCTGCATCTTTTAA	6665	False	NA	7	True	NA	NA	NA	25262340	25267500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25263530_25264963_25265844_25265979_25266088_25266175
ES.18528.1	chr2	-	165	1	Intergenic	novelGene_15394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGTGTTTTTTTTTA	1218	False	NA	NA	False	NA	NA	NA	25271182	25271017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25271000_25271200
ES.18529.1	chr2	+	212	1	Intergenic	novelGene_15395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAATAAATAGACTGTAG	5777	False	NA	NA	False	NA	NA	NA	25278279	25278491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25278300_25278500
ES.1853.1	chr1	+	3968	1	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAGATGTTTTAACA	NA	False	NA	NA	False	NA	NA	NA	170585473	170589441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170585500_170589400
ES.18530.1	chr2	+	1930	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	1	4	1	-4	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGAAGTGTCCATAGG	NA	False	NA	NA	False	AATAAA	-15	NA	25285886	25291329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
ES.18531.1	chr2	+	2836	8	NIC	ENSMUSG00000015094.17	novel	1412	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1	junction_2	8.48287590817344	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTCTGGGTTCACTG	3120	False	NA	11	True	ATTAAA	-19	NA	25293076	25299505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25293378_25296226_25297555_25297660_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25299014_25299110
ES.18531.2	chr2	+	1485	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	-1	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTCTGGGTTCACTG	3125	False	NA	11	True	ATTAAA	-19	NA	25293081	25299505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ES.18531.3	chr2	+	1796	7	NIC	ENSMUSG00000015094.17	novel	1485	9	NA	NA	6	1	intron_retention	FALSE	canonical	3	17	junction_3	4.20317340430616	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGGCTTCTGGGTTC	3132	False	NA	7	True	ATTAAA	-15	NA	25293088	25299501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25293378_25296226_25296374_25297607_25298027_25298125_25298193_25298271_25298360_25298618_25299014_25299110
ES.18532.1	chr2	+	8174	48	FSM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	-137	-4	-137	4	multi-exon	TRUE	canonical	3	27	junction_14	9.25265307651151	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGAGCCTGTGCCTG	NA	False	NA	15	True	AATAAA	-18	NA	25318577	25338556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.10	chr2	+	8002	48	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-24	2	intron_retention	FALSE	canonical	1	1	junction_7	11.2225924885418	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGGAGCCTGTGCC	NA	False	NA	13	True	AATAAA	-16	NA	25318690	25338554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324958_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.13	chr2	+	6407	38	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-4721	-8	intron_retention	FALSE	canonical	0	0	junction_13	11.8081201709774	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACCTACCTGTGGG	NA	False	NA	3	True	AATAAA	-6	NA	25326598	25338544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331201_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.14	chr2	+	5982	35	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	8784	-2	-3821	2	3prime_fragment	FALSE	canonical	3	27	junction_1	9.11940210812576	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGGAGCCTGTGCC	NA	False	NA	13	True	AATAAA	-16	NA	25327498	25338554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.15	chr2	+	6301	33	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	8977	0	-3628	0	intron_retention	FALSE	canonical	3	28	junction_7	8.58863484131791	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCTGTGGGAGCCTGTG	NA	False	NA	11	True	AATAAA	-14	NA	25327691	25338552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211
ES.18532.16	chr2	+	5755	33	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	9188	8	-3417	-8	3prime_fragment	FALSE	canonical	3	28	junction_6	8.57270149588215	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACCTACCTGTGGG	NA	False	NA	3	True	AATAAA	-6	NA	25327902	25338544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.17	chr2	+	5533	31	NIC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-2946	3	intron_retention	FALSE	canonical	3	28	junction_5	8.63455589799241	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGAGCCTGTGCCT	NA	False	NA	14	True	AATAAA	-17	NA	25328373	25338555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.18	chr2	+	4658	27	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	11818	1	-787	-1	3prime_fragment	FALSE	canonical	3	38	junction_5	6.95303347872085	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCTGTGGGAGCCTGT	NA	False	NA	10	True	AATAAA	-13	NA	25330532	25338551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.19	chr2	+	4000	22	NIC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	601	-8	intron_retention	FALSE	canonical	3	38	junction_1	7.34383910425029	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACCTACCTGTGGG	NA	False	NA	3	True	AATAAA	-6	NA	25331920	25338544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.2	chr2	+	8422	47	NIC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-30	-3	intron_retention	FALSE	canonical	3	27	junction_13	9.31655538054651	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTACCTGTGGGAGCCT	NA	False	NA	8	True	AATAAA	-11	NA	25318684	25338549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.20	chr2	+	2311	13	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	15818	8	-641	-8	3prime_fragment	FALSE	canonical	3	45	junction_9	7.88458411500991	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACCTACCTGTGGG	1728	False	NA	3	True	AATAAA	-6	NA	25334532	25338544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.21	chr2	+	1048	3	ISM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	18269	-3	1129	3	3prime_fragment	FALSE	canonical	3	53	junction_2	9	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGAGCCTGTGCCT	4179	False	NA	14	True	AATAAA	-17	NA	25336983	25338555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25337128_25337211_25337413_25337852
ES.18532.3	chr2	+	8201	49	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-29	-8	intron_retention	FALSE	canonical	0	0	junction_2	12.6353093221601	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACCTACCTGTGGG	NA	False	NA	3	True	AATAAA	-6	NA	25318685	25338544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25322395_25322543_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.4	chr2	+	7903	48	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-29	-3	intron_retention	FALSE	canonical	0	0	junction_17	14.1390302869703	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTACCTGTGGGAGCCT	NA	False	NA	8	True	AATAAA	-11	NA	25318685	25338549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328527_25328675_25328853_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332067_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.5	chr2	+	7824	47	NIC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-29	-1	intron_retention	FALSE	canonical	0	0	junction_25	11.416003756873	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCTGTGGGAGCCTGT	NA	False	NA	10	True	AATAAA	-13	NA	25318685	25338551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.6	chr2	+	8017	48	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_21	11.0804294458469	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCTGTGGGAGCCTGTG	NA	False	NA	11	True	AATAAA	-14	NA	25318687	25338552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329527_25330554_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.8	chr2	+	8051	48	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-26	4	intron_retention	FALSE	canonical	0	0	junction_34	11.3169890756483	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGAGCCTGTGCCTG	NA	False	NA	15	True	AATAAA	-18	NA	25318688	25338556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334245_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18532.9	chr2	+	8007	48	NNC	ENSMUSG00000026944.19	novel	8033	48	NA	NA	-25	-3	intron_retention	FALSE	canonical	0	0	junction_9	11.1412187029703	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTACCTGTGGGAGCCT	NA	False	NA	8	True	AATAAA	-11	NA	25318689	25338549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326427_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ES.18533.1	chr2	-	1691	5	FSM	ENSMUSG00000015090.14	ENSMUST00000144016.8	1327	5	-365	1	1	0	multi-exon	FALSE	canonical	2	4	junction_4	2.54950975679639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTTGCTTTTGTCTGT	5893	False	NA	-2	True	AATAAA	-16	NA	25359760	25356723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25357358_25357829_25357932_25358083_25358201_25358844_25358922_25358999
ES.18533.2	chr2	-	771	7	FSM	ENSMUSG00000015090.14	ENSMUST00000114259.3	775	7	1	3	1	0	multi-exon	FALSE	canonical	0	0	junction_1	3.71558280160133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTTGCTTTTGTCTGT	5893	False	NA	-2	True	AATAAA	-16	NA	25359760	25356723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25356844_25357331_25357358_25357829_25357932_25358083_25358201_25358844_25358922_25358999_25359140_25359571
ES.18533.3	chr2	-	3032	1	NIC	ENSMUSG00000015090.14	novel	775	7	NA	NA	1	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGATCTTTGCTTTTG	5893	False	NA	-7	True	AATAAA	-11	NA	25359760	25356728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25356700_25359800
ES.18534.1	chr2	-	1268	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	-119	1	-119	-1	multi-exon	FALSE	canonical	3	9	junction_1	2.38047614284762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTTTGTCGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-18	NA	25390744	25388663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
ES.18534.2	chr2	-	1300	6	FSM	ENSMUSG00000015083.12	ENSMUST00000149062.8	868	6	-428	-4	-70	-1	multi-exon	FALSE	canonical	3	12	junction_1	1.72046505340853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTTTGTCGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-18	NA	25390695	25388663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
ES.18534.3	chr2	-	1628	4	NIC	ENSMUSG00000015083.12	novel	868	6	NA	NA	-50	0	intron_retention	FALSE	canonical	3	13	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTTTGTCGTTTT	NA	False	NA	-6	True	ATTAAA	-14	NA	25390675	25388667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25389518_25389600_25389672_25389850_25389988_25390105
ES.18535.1	chr2	+	2382	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	5	1	5	-1	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390766	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.10	chr2	+	4559	2	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	266	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390844	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25394642_25394721
ES.18535.11	chr2	+	4385	3	NIC	ENSMUSG00000015095.13	novel	739	5	NA	NA	16	-1	intron_retention	FALSE	canonical	3	247	junction_1	24	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390845	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25393286_25393448_25394340_25394428
ES.18535.12	chr2	+	4465	3	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	18	-3	intron_retention	FALSE	canonical	3	240	junction_1	27.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390847	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25393058_25393136_25394340_25394428
ES.18535.13	chr2	+	4459	3	FSM	ENSMUSG00000015095.13	ENSMUST00000148845.2	870	3	-3066	-523	-18	-3	multi-exon	FALSE	canonical	3	266	junction_2	14.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390852	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25394340_25394428_25394642_25394721
ES.18535.14	chr2	+	4631	1	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-18	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390852	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25390900_25395500
ES.18535.15	chr2	+	3500	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	31	junction_1	94.342779267944	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390852	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.16	chr2	+	3361	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-17	2	intron_retention	FALSE	canonical	3	26	junction_2	82.7625075324644	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTAGTCTGTTTGTA	NA	False	NA	18	True	AATAAA	-18	NA	25390853	25395485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.17	chr2	+	2302	9	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	-6	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	79.815314163386	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACATGCCATCTAGTC	NA	False	NA	10	True	AATAAA	-10	NA	25390855	25395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.18	chr2	+	4293	4	NIC	ENSMUSG00000015095.13	novel	739	5	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	247	junction_1	19.7371617907833	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390855	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.19	chr2	+	2226	9	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	83.0929449472096	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390856	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393202_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.2	chr2	+	3430	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390768	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.20	chr2	+	4215	5	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	240	junction_1	21.2955394390469	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390856	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.21	chr2	+	3741	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	26	junction_2	97.5061023731335	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACATGCCATCTAGTC	NA	False	NA	10	True	AATAAA	-10	NA	25390857	25395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392868_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.22	chr2	+	3662	5	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	227	junction_3	27.1511970270189	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390857	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393879_25394191_25394340_25394428
ES.18535.23	chr2	+	3600	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	26	junction_1	88.0291933899709	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390858	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.24	chr2	+	3342	8	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	7	junction_7	108.905875855797	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390858	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394732
ES.18535.25	chr2	+	2279	9	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	83.5448045960968	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390858	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394732
ES.18535.26	chr2	+	3190	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	-6	intron_retention	FALSE	canonical	3	7	junction_1	94.9098987929546	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACATGCCATCTAGTC	NA	False	NA	10	True	AATAAA	-10	NA	25390858	25395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.27	chr2	+	3190	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	1	junction_5	92.9003348875677	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCCATCTAGTCTGTT	NA	False	NA	14	True	AATAAA	-14	NA	25390858	25395481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394428_25394642_25394721
ES.18535.28	chr2	+	3582	5	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	31	junction_1	95.7366178638038	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390859	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392882_25393058_25393136_25393286_25393448_25394642_25394721
ES.18535.29	chr2	+	3113	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	3	junction_5	90.6516093939555	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390859	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393654_25394191_25394340_25394428_25394642_25394721
ES.18535.3	chr2	+	3342	8	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	29	0	intron_retention	FALSE	canonical	3	14	junction_3	86.6185633118218	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390790	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393202_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.30	chr2	+	3204	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	1	junction_5	113.307840270065	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390859	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25393879_25394428_25394642_25394721
ES.18535.32	chr2	+	3902	2	NIC	ENSMUSG00000015095.13	novel	567	4	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	31	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390859	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392882
ES.18535.33	chr2	+	3958	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	240	junction_2	19.1143924831526	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACATGCCATCTAGTC	NA	False	NA	10	True	AATAAA	-10	NA	25390859	25395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.34	chr2	+	3811	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	231	junction_2	22.29798197147	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATGCCATCTAGTCTG	NA	False	NA	12	True	AATAAA	-12	NA	25390859	25395479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25394340_25394428_25394642_25394721
ES.18535.35	chr2	+	3106	7	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_5	115.356934001482	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390859	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393202_25393286_25393448_25393879_25394446_25394642_25394721
ES.18535.36	chr2	+	3675	7	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_6	117.955735577188	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390859	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25394340_25394428_25394654_25394721
ES.18535.37	chr2	+	3592	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	26	junction_2	96.6573328827151	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390859	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392868_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.38	chr2	+	3348	8	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_7	89.853849587618	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390859	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394654_25394721
ES.18535.39	chr2	+	3662	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	26	junction_2	89.3737470774649	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390860	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392868_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.4	chr2	+	3227	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	31	junction_1	86.2238688273471	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390812	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.40	chr2	+	3331	8	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	91.3763243573587	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390860	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393142_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.41	chr2	+	4295	4	NNC	ENSMUSG00000015095.13	novel	739	5	NA	NA	-9	-7	intron_retention	FALSE	canonical	0	0	junction_3	129.244815069009	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACATGCCATCTAGT	NA	False	NA	9	True	AATAAA	-9	NA	25390861	25395476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25393286_25393448_25394340_25394428_25394654_25394721
ES.18535.42	chr2	+	2140	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	89.5717703342762	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390862	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25390899_25391947_25392164_25392868_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.43	chr2	+	4524	2	ISM	ENSMUSG00000015095.13	ENSMUST00000148845.2	870	3	-3050	-524	-2	-2	intron_retention	FALSE	canonical	3	295	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCCATCTAGTCTGTT	NA	False	NA	14	True	AATAAA	-14	NA	25390868	25395481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_25394340_25394428
ES.18535.44	chr2	+	2523	8	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	14	junction_4	88.6432888213272	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390872	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393202_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.45	chr2	+	2211	9	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	82.9034641917936	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACATGCCATCTAGTC	NA	False	NA	10	True	AATAAA	-10	NA	25390874	25395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25390899_25392005_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.46	chr2	+	2108	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	82.0069683450306	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACATGCCATCTAGT	NA	False	NA	9	True	AATAAA	-9	NA	25390876	25395476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25390899_25391947_25392164_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.5	chr2	+	3615	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	227	junction_4	23.3595091272626	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGCCATCTAGTCTGT	NA	False	NA	13	True	AATAAA	-13	NA	25390829	25395480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ES.18535.6	chr2	+	2167	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	87.3253358751874	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390833	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394428_25394642_25394721
ES.18535.7	chr2	+	3673	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	231	junction_2	20.763884243775	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390838	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18535.8	chr2	+	3935	5	NNC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	9	-1	intron_retention	FALSE	canonical	3	14	junction_2	108.107296238506	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCATCTAGTCTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	25390838	25395482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25392571_25392882_25393058_25393202_25393286_25393448_25394340_25394428
ES.18535.9	chr2	+	3916	6	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	231	junction_1	22.7279563533548	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390844	25395483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
ES.18536.1	chr2	-	134	1	Intergenic	novelGene_15396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAAGTAAATAA	NA	False	NA	NA	False	AATAAA	-6	NA	25406244	25406110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25406100_25406200
ES.18537.1	chr2	+	182	1	Intergenic	novelGene_15397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTAGTTGTTACTA	NA	False	NA	NA	False	NA	NA	NA	25422166	25422348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25422200_25422300
ES.18538.2	chr2	-	2243	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	-78	879	-78	5	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTGTTCATCTGGCT	NA	False	NA	-13	True	ATTAAA	-18	NA	25437030	25408872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
ES.18538.3	chr2	-	1946	9	NIC	ENSMUSG00000026942.14	novel	3044	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	45.2050882091828	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436916	25408877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25428877_25429097_25436873
ES.18538.5	chr2	-	2086	2	ISM	ENSMUSG00000026942.14	ENSMUST00000151742.2	4117	9	17490	0	17490	0	3prime_fragment	FALSE	canonical	3	117	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25411662	25408877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25409641_25410339
ES.18538.6	chr2	-	2140	11	NNC	ENSMUSG00000026942.14	novel	3044	11	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.2180781658664	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25429097	25408877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25423283_25423342_25426687_25426787_25427082_25427162_25428877
ES.18539.1	chr2	+	175	1	Intergenic	novelGene_15398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	25445572	25445747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25445600_25445700
ES.1854.1	chr1	+	179	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATAAAAAAGGAGAA	9993	False	NA	NA	False	NA	NA	NA	170640903	170641082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170640900_170641100
ES.18540.1	chr2	+	750	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	-11	-17	-11	17	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGCCTTCTGACGCT	NA	False	NA	34	True	NA	NA	NA	25447847	25452111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ES.18540.2	chr2	+	625	4	NIC	ENSMUSG00000015092.10	novel	722	5	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	1372.66164804004	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCCTGGATTTTTCC	NA	False	NA	16	True	NA	NA	NA	25447860	25452093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25448042_25450162_25450215_25450551_25450713_25451862
ES.18540.3	chr2	+	750	5	NNC	ENSMUSG00000015092.10	novel	722	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1210.38599215292	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCCTGGATTTTTCC	NA	False	NA	16	True	NA	NA	NA	25447861	25452093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25448042_25450162_25450215_25450551_25450745_25450980_25451075_25451862
ES.18540.5	chr2	+	553	2	NNC	ENSMUSG00000015092.10	novel	910	3	NA	NA	5	-2296	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTGCGCATGCACG	NA	False	NA	NA	False	NA	NA	NA	25447887	25448980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25448042_25448581
ES.18540.6	chr2	+	2804	4	NIC	ENSMUSG00000015092.10	novel	722	5	NA	NA	8	-7	intron_retention	FALSE	canonical	3	2396	junction_3	246.237013193928	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATAGCCTCCTGGAT	NA	False	NA	10	True	NA	NA	NA	25447890	25452087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_25450215_25450551_25450713_25450980_25451075_25451862
ES.18540.7	chr2	+	911	4	FSM	ENSMUSG00000015092.10	ENSMUST00000153008.8	765	4	28	-174	2	174	multi-exon	FALSE	canonical	3	2578	junction_3	170.755836080515	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCTTAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	25447910	25451547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980
ES.18541.1	chr2	-	2498	17	NNC	ENSMUSG00000026941.17	novel	3990	29	NA	NA	1514	2	intron_retention	TRUE	canonical	0	0	junction_6	2.8277365064659	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGGCTGCACTCCAT	9199	False	NA	NA	False	AATAAA	-27	NA	25457613	25453124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25453382_25453543_25453720_25454177_25454287_25454363_25454492_25454616_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25456723_25456836_25456915_25457041_25457138_25457271_25457364
ES.18541.2	chr2	-	1634	5	NIC	ENSMUSG00000026941.17	novel	3388	26	NA	NA	3718	2	intron_retention	FALSE	canonical	0	0	junction_3	2.73861278752583	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGGCTGCACTCCAT	5714	False	NA	NA	False	AATAAA	-27	NA	25455409	25453124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25454287_25454363_25454492_25454587_25454723_25455107_25455199_25455291
ES.18541.3	chr2	-	3618	16	NNC	ENSMUSG00000026941.17	novel	3990	29	NA	NA	502	0	intron_retention	FALSE	canonical	0	0	junction_6	2.95446930748805	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTCAGGCTGCACTCC	9529	False	NA	NA	False	AATAAA	-25	NA	25458625	25453126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25453382_25453543_25453720_25454177_25454287_25454363_25454492_25454616_25454723_25454836_25454984_25455107_25455199_25455287_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25457041_25457138_25457271_25457364_25457494_25457597_25457787_25457870
ES.18541.4	chr2	-	2988	15	NNC	ENSMUSG00000026941.17	novel	3990	29	NA	NA	1232	0	intron_retention	FALSE	canonical	0	0	junction_6	2.8642768079662	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTCAGGCTGCACTCC	9946	False	NA	NA	False	AATAAA	-25	NA	25457895	25453126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25453382_25453543_25453720_25454177_25454287_25454363_25454492_25454616_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25457041_25457138_25457271_25457364_25457787_25457870
ES.18542.1	chr2	-	649	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	295	-7	-51	7	multi-exon	FALSE	canonical	3	774	junction_2	2.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTCTTGCCTTCTTT	5495	False	NA	-1	True	ATTAAA	-27	NA	25464941	25463434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25463712_25464199_25464325_25464694
ES.18542.2	chr2	-	1502	1	Genic_Genomic	ENSMUSG00000026941.17_ENSMUSG00000036504.7	novel	NA	NA	NA	NA	-51	2	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGACTTGTGTCTTGCCT	5495	False	NA	-6	True	ATTAAA	-22	NA	25464941	25463439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_25463400_25464900
ES.18542.3	chr2	-	709	3	FSM	ENSMUSG00000036504.7	ENSMUST00000147096.2	656	3	18	-71	18	-1	multi-exon	FALSE	canonical	3	48	junction_2	365.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTGACTTGTGTCTTG	5564	False	NA	-9	True	ATTAAA	-19	NA	25464872	25463442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25463712_25464199_25464462_25464694
ES.18543.1	chr2	-	4820	1	FSM	ENSMUSG00000029419.9	ENSMUST00000188161.2	2925	1	-352	-1543	14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCTAATAACTCGGT	8092	False	NA	NA	False	AGTAAA	-17	NA	25470261	25465441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25465400_25470300
ES.18544.1	chr2	-	3193	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	42	-5	6	5	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGACTCTTTTTCTGG	3260	False	NA	-1	True	CATAAA	-20	NA	25498491	25473024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.10	chr2	-	7864	6	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-2614	0	intron_retention	FALSE	canonical	3	287	junction_5	18.8616012045637	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	NA	False	NA	-6	True	CATAAA	-15	NA	25482998	25473029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25474174_25474787_25475549_25475635_25475846_25476879_25477031_25477286
ES.18544.11	chr2	-	4402	12	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	4	-1	intron_retention	FALSE	canonical	3	258	junction_4	30.4280753350428	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3278	False	NA	-7	True	CATAAA	-14	NA	25498473	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25475549_25475635_25475846_25476879_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.13	chr2	-	3104	16	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	83.7499983416252	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3281	False	NA	-7	True	CATAAA	-14	NA	25498470	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482836_25482897_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.14	chr2	-	3784	14	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	3	-1	intron_retention	FALSE	canonical	3	258	junction_6	29.4941574798092	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3277	False	NA	-7	True	CATAAA	-14	NA	25498474	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.17	chr2	-	3241	15	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	85.9546926215984	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3262	False	NA	-7	True	CATAAA	-14	NA	25498489	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478781_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.19	chr2	-	2790	15	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	86.0519835770857	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3412	False	NA	-7	True	CATAAA	-14	NA	25498339	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477395_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.2	chr2	-	4154	14	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	1	5	intron_retention	FALSE	canonical	2	3	junction_13	87.0945891294132	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGACTCTTTTTCTGG	3275	False	NA	-1	True	CATAAA	-20	NA	25498476	25473024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492563_25498124
ES.18544.22	chr2	-	3124	14	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.7171755999549	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTGTGTGACTCTTT	3264	False	NA	-7	True	CATAAA	-14	NA	25498487	25473030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.26	chr2	-	4153	14	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	3	junction_13	132.309391760105	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGTGTGTGACTCTT	3273	False	NA	-8	True	CATAAA	-13	NA	25498478	25473031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475536_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488139_25488210_25491362_25491411_25492432_25492563_25498124
ES.18544.27	chr2	-	3557	14	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	44	-2	intron_retention	FALSE	canonical	0	0	junction_9	135.024126706672	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGTGTGTGACTCTT	3327	False	NA	-8	True	CATAAA	-13	NA	25498424	25473031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25482309_25482416_25482778_25482920_25483355_25483535_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ES.18544.28	chr2	-	3422	16	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	109.70189910237	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGGTGTGTGACTCT	3267	False	NA	-9	True	CATAAA	-12	NA	25498484	25473032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25493405_25493650_25498124
ES.18544.29	chr2	-	4339	1	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-4	-7643	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGCAGATTTTTAAAAA	3270	False	NA	NA	False	NA	NA	NA	25498481	25494142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25494100_25498500
ES.18544.30	chr2	-	3334	1	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	1	-8643	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAGAAAAAAAAAAAAAA	3275	False	NA	NA	False	AAGAAA	-44	NA	25498476	25495142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25495100_25498500
ES.18544.6	chr2	-	9909	11	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	3743	1	intron_retention	FALSE	canonical	3	286	junction_6	24.4081953450066	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTGACTCTTTTT	7026	False	NA	-5	True	CATAAA	-16	NA	25494725	25473028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25474174_25474787_25475549_25475635_25475846_25476879_25477031_25477286_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432
ES.18544.7	chr2	-	4505	13	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	0	1	intron_retention	FALSE	canonical	2	3	junction_12	90.0253050844903	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTGACTCTTTTT	3283	False	NA	-5	True	CATAAA	-16	NA	25498468	25473028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25474001_25474114_25474174_25474787_25475549_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492563_25498124
ES.18544.9	chr2	-	3325	16	NNC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	110.865363792705	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3273	False	NA	-6	True	CATAAA	-15	NA	25498478	25473029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492084_25492235_25492432_25492568_25498124
ES.18545.1	chr2	+	1563	1	Antisense	novelGene_ENSMUSG00000026940.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGGATTTGTTTCAA	1027	False	NA	NA	False	AAAAAG	-9	NA	25502894	25504457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_25502900_25504500
ES.18546.1	chr2	-	781	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	-17	31	-17	6	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTCTGAAGCAATTAAACA	NA	False	NA	0	True	AATAAA	-24	NA	25512034	25510109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ES.18547.1	chr2	-	167	1	Intergenic	novelGene_15399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAAAATATAGGC	NA	False	NA	NA	False	NA	NA	NA	25552382	25552215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25552200_25552400
ES.18548.1	chr2	+	911	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	68	4	68	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGATTCTTTTTTAT	NA	False	NA	23	True	TATAAA	-19	NA	25596818	25597729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25596800_25597700
ES.18548.2	chr2	+	1248	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	94	-359	94	359	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGAGTACCGGTGCCT	NA	False	NA	NA	False	NA	NA	NA	25596844	25598092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25596800_25598100
ES.18548.3	chr2	+	777	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	100	106	100	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGCTGGACCCTTAA	NA	False	NA	-41	True	AAAAAG	-26	NA	25596850	25597627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_25596800_25597600
ES.18549.1	chr2	-	169	1	Intergenic	novelGene_15400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATAAATATATCTTT	4326	False	NA	NA	False	NA	NA	NA	25604140	25603971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25604000_25604100
ES.1855.1	chr1	+	4247	2	Antisense	novelGene_ENSMUSG00000026663.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCTGAACTAGAAAGGTA	921	False	NA	NA	False	AAGAAA	-2	NA	170643766	170648077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170644175_170644238
ES.1855.2	chr1	+	1871	2	Antisense	novelGene_ENSMUSG00000119049.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGGCAGGAGAGCTGG	892	False	NA	NA	False	NA	NA	NA	170645703	170662961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170647002_170662388
ES.1855.3	chr1	+	3023	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGTTCAGCTCAAAGG	4578	False	NA	NA	False	NA	NA	NA	170649389	170652412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170649400_170652400
ES.1855.4	chr1	+	3907	2	Antisense	novelGene_ENSMUSG00000119049.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGGCAGGAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	170658970	170662961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170661963_170662046
ES.18550.1	chr2	-	2819	2	Intergenic	novelGene_15401	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCGTGTGGCTGGTCCC	NA	False	NA	NA	False	NA	NA	NA	25724319	25721275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25723191_25723415
ES.18551.1	chr2	-	3481	1	NIC	ENSMUSG00000059625.7	novel	1289	8	NA	NA	767	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATTTCCCTGGCTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	25736493	25733012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25733000_25736500
ES.18551.2	chr2	-	1367	8	FSM	ENSMUSG00000059625.7	ENSMUST00000076989.7	1289	8	-86	8	-86	-8	multi-exon	FALSE	canonical	1	1	junction_3	2.18529407725405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAATTTCCCTGGCTT	NA	False	NA	NA	False	ATTAAA	-24	NA	25737346	25733014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25733372_25733935_25734013_25734497_25734685_25735273_25735408_25735664_25735790_25736220_25736369_25736729_25736865_25737142
ES.18551.3	chr2	-	2377	6	NIC	ENSMUSG00000059625.7	novel	1289	8	NA	NA	-76	-8	intron_retention	FALSE	canonical	1	2	junction_5	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAATTTCCCTGGCTT	NA	False	NA	NA	False	ATTAAA	-24	NA	25737336	25733014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25733372_25733935_25734013_25734497_25735408_25735664_25736369_25736729_25736865_25737142
ES.18552.1	chr2	+	2677	15	NNC	ENSMUSG00000058740.15	novel	4714	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.257539376818856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGCATGGTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	25790895	25806604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25805790_25805879_25806008
ES.18553.1	chr2	-	149	1	Intergenic	novelGene_15402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	25792789	25792640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25792600_25792800
ES.18554.1	chr2	+	5506	1	Intergenic	novelGene_15403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATACCCAAAGTTAACAA	NA	False	NA	NA	False	NA	NA	NA	25862213	25867719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25862200_25867700
ES.18555.10	chr2	-	5531	13	NNC	ENSMUSG00000026933.18	novel	5464	15	NA	NA	-10224	290	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	36.1050742817251	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGGTTGTCACAACT	NA	False	NA	1	True	AATAAA	-27	NA	25835797	25818252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25835698
ES.18555.11	chr2	-	6606	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-28	287	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873322	25818255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.12	chr2	-	6633	18	NNC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	28	287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	40.5025523566706	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873266	25818255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25837437_25837521_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.14	chr2	-	5795	15	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	17	287	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	40.8607016432111	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25856762	25818255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825574_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25855674_25855837_25856697
ES.18555.15	chr2	-	6420	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	14	285	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGTGGTTGTCA	NA	False	NA	-4	True	AATAAA	-22	NA	25873280	25818257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.16	chr2	-	5115	12	NNC	ENSMUSG00000026933.18	novel	3354	12	NA	NA	-21	285	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	32.5698232790685	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGTGGTTGTCA	NA	False	NA	-4	True	AATAAA	-22	NA	25873241	25818257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25819910_25828550_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.18	chr2	-	5778	15	NNC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	12963	284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.818218077862	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCATGTGTGTGGTTGTC	4532	False	NA	-5	True	AATAAA	-21	NA	25842799	25818258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834052_25834159_25834437_25834616_25834953_25835051_25835145_25835286_25835698_25835835_25842689
ES.18555.2	chr2	-	7980	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGAAGAAAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	25873290	25816849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.20	chr2	-	6290	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-30	284	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	31.7755802464723	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCATGTGTGTGGTTGTC	NA	False	NA	-5	True	AATAAA	-21	NA	25873250	25818258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25873034
ES.18555.22	chr2	-	6439	16	NNC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	6	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	40.5032783309642	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCATGTGTGTGGTTGT	NA	False	NA	-6	True	AATAAA	-20	NA	25873288	25818259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855850_25856697_25856961_25872793
ES.18555.24	chr2	-	6312	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	18	181	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGCCCTGTGTGTCTT	NA	False	NA	-108	True	ATTAAA	-19	NA	25873276	25818361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.25	chr2	-	6487	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-15	181	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGCCCTGTGTGTCTT	NA	False	NA	-108	True	ATTAAA	-19	NA	25873309	25818361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.27	chr2	-	5868	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-19	-368	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGCTGCCGGTTCCT	NA	False	NA	NA	False	GATAAA	-31	NA	25873239	25818910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.29	chr2	-	5734	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	34	-381	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCGTACTTTCCACCCTTG	NA	False	NA	NA	False	GATAAA	-18	NA	25873260	25818923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.3	chr2	-	10316	17	NNC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	40.9260002932121	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGAAGAAAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	25873290	25816849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823598_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25843926_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.30	chr2	-	5486	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	13	-551	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	31.7755802464723	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTACATATGTGGAGTGA	NA	False	NA	-1	True	ACTAAA	-40	NA	25873281	25819093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25873034
ES.18555.31	chr2	-	5736	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	3	-552	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTACATATGTGGAGTG	NA	False	NA	-2	True	ACTAAA	-39	NA	25873291	25819094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.32	chr2	-	5580	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	17	-552	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTACATATGTGGAGTG	NA	False	NA	-2	True	ACTAAA	-39	NA	25873277	25819094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.35	chr2	-	4555	5	NIC	ENSMUSG00000026933.18	novel	5464	15	NA	NA	-3584	-577	intron_retention	FALSE	canonical	3	102	junction_4	20.1370305656023	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTTGTCTTCTGCTA	NA	False	NA	-27	True	AAAAAG	-40	NA	25829157	25819119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861
ES.18555.37	chr2	-	5637	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-11	530	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	-115	True	NA	NA	NA	25873305	25819207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.38	chr2	-	2373	1	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	3046	530	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	534	False	NA	-115	True	NA	NA	NA	25821580	25819207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25819200_25821600
ES.18555.4	chr2	-	7868	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-28	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGGGGAAGAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	25873322	25816851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.40	chr2	-	5449	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	35	530	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	-115	True	NA	NA	NA	25873259	25819207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.42	chr2	-	4762	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	9	-3596	combination_of_known_junctions	FALSE	canonical	3	81	junction_12	19.0734253755207	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGCTGTTAATGCCA	NA	False	NA	NA	False	AATAAA	-14	NA	25873211	25823550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.43	chr2	-	552	4	NNC	ENSMUSG00000026933.18	novel	378	3	NA	NA	-117	928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.0457905740837	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATGGTGTTTAATCACA	NA	False	NA	NA	False	NA	NA	NA	25873411	25854827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25854934_25855674_25855837_25856697_25856961_25873390
ES.18555.5	chr2	-	7289	15	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	154	-92	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	34.2666613727199	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCTTTTGGTATCTGG	NA	False	NA	NA	False	NA	NA	NA	25872914	25816941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25855674_25855837_25856697_25856961_25872793
ES.18555.6	chr2	-	7871	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	-13	-126	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGTCTTCCTGGTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	25873307	25816975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.8	chr2	-	7740	17	NNC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	7	-127	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	46.3791692869762	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGGGTCTTCCTGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	25873213	25816976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834052_25834159_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ES.18555.9	chr2	-	3545	5	NIC	ENSMUSG00000026933.18	novel	5464	15	NA	NA	-3690	292	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.9148164229596	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTTGTCACAACTCC	NA	False	NA	3	True	AATAAA	-29	NA	25829263	25818250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25820041_25825473_25825577_25825861_25826071_25826526_25826664_25827957
ES.18556.1	chr2	-	3076	2	Intergenic	novelGene_15404	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCCTGCCTCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	25884114	25880890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25881361_25881508
ES.18557.1	chr2	+	180	1	Intergenic	novelGene_15405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATAACAGGGG	NA	False	NA	NA	False	NA	NA	NA	25908930	25909110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25908900_25909100
ES.18558.1	chr2	-	3465	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	-27	-1586	-27	1586	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGACTGCTTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	25911786	25886968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.10	chr2	-	1730	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	316.353299334779	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911752	25888554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900639_25904903_25904978_25906307_25906429_25911408_25911586_25911697
ES.18558.11	chr2	-	1603	9	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	333.611839380739	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911728	25888554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25899166_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911523
ES.18558.12	chr2	-	2482	1	NIC	ENSMUSG00000036352.17	novel	814	3	NA	NA	6896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25891036	25888554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25888600_25891000
ES.18558.13	chr2	-	1729	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911775	25888554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.14	chr2	-	7440	8	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	686	junction_2	75.244092587975	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTGTTACTTCATGG	NA	False	NA	-4	True	AATAAA	-19	NA	25911756	25888555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25906429_25911408
ES.18558.15	chr2	-	1841	10	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	249.305454967482	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGTGTTACTTCATG	NA	False	NA	-5	True	AATAAA	-18	NA	25911744	25888556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899166_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.16	chr2	-	1834	10	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	250.784300609306	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTTGTGTTACTTCAT	NA	False	NA	-6	True	AATAAA	-17	NA	25911752	25888557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897958_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.18	chr2	-	1791	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_10	241.607553689863	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911752	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408_25911620_25911668
ES.18558.19	chr2	-	1784	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	317.721009692466	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911750	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904905_25904978_25906307_25906429_25911408_25911623_25911674
ES.18558.2	chr2	-	3296	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	2	1585	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGACTGCTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	25911757	25886969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.21	chr2	-	1628	10	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_9	318.851217287048	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911728	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408_25911620_25911668
ES.18558.23	chr2	-	5791	13	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	63	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	392.071944574235	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911696	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889764_25889972_25891661_25892000_25892064_25892111_25893098_25894745_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899270_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.25	chr2	-	1644	8	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	282.314848120654	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911751	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25911408
ES.18558.27	chr2	-	6048	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	61	-5	intron_retention	FALSE	canonical	3	686	junction_2	71.0541166998788	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	False	NA	-8	True	AATAAA	-15	NA	25911698	25888559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25904978_25906307_25906429_25911408
ES.18558.3	chr2	-	2012	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	8	220	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_10	241.607553689863	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCATGGCTACTTCTT	NA	False	NA	NA	False	NA	NA	NA	25911751	25888334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408_25911618_25911669
ES.18558.32	chr2	-	1920	11	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	315.556270734714	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTACTTGTGTTACTT	NA	False	NA	-9	True	AATAAA	-14	NA	25911752	25888560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25905966_25906048_25906307_25906429_25911408
ES.18558.33	chr2	-	1881	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	321.173613486538	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTACTTGTGTTACTT	NA	False	NA	-9	True	AATAAA	-14	NA	25911722	25888560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25891402_25891475_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.34	chr2	-	3169	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	7	-6	intron_retention	FALSE	canonical	3	686	junction_2	71.9700458524239	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTACTTGTGTTACTT	NA	False	NA	-9	True	AATAAA	-14	NA	25911752	25888560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25906429_25911408
ES.18558.35	chr2	-	1526	10	NNC	ENSMUSG00000036352.17	novel	778	6	NA	NA	-1	2776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.787850179871	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGACCAAAGGACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	25911760	25892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25892838_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.36	chr2	-	1797	8	ISM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	7367	8	-506	5prime_fragment	FALSE	canonical	3	730	junction_1	53.3846266948355	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAATATCATGCCATGAA	NA	False	NA	NA	False	AATAAA	-14	NA	25911751	25895921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.4	chr2	-	2065	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	3	-216	3	216	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTTTCATGGCTACT	NA	False	NA	NA	False	NA	NA	NA	25911756	25888338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.5	chr2	-	1901	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	-48	-1	-48	1	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTACTTCATGGCA	NA	False	NA	-2	True	AATAAA	-21	NA	25911807	25888553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.6	chr2	-	1906	11	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	320.975700014814	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTACTTCATGGCA	NA	False	NA	-2	True	AATAAA	-21	NA	25911762	25888553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25891424_25891475_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.7	chr2	-	1644	8	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	287.467691174831	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTACTTCATGGCA	NA	False	NA	-2	True	AATAAA	-21	NA	25911776	25888553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25889080_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ES.18558.8	chr2	-	1110	5	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	344.008266615789	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTACTTCATGGCA	NA	False	NA	-2	True	AATAAA	-21	NA	25911756	25888553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25896538_25896626_25897730_25897832_25906380_25906429_25911408
ES.18558.9	chr2	-	1833	10	NNC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	256.557552564289	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTACTTCATGGCA	NA	False	NA	-2	True	AATAAA	-21	NA	25911757	25888553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911426
ES.18559.1	chr2	-	175	1	Intergenic	novelGene_15406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAACTTACAA	NA	False	NA	NA	False	NA	NA	NA	25921051	25920876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_25920900_25921100
ES.1856.1	chr1	+	178	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	170686365	170686543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170686400_170686500
ES.18560.1	chr2	+	178	1	Intergenic	novelGene_15407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	25959888	25960066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25959900_25960100
ES.18561.1	chr2	+	174	1	Intergenic	novelGene_15408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	25991886	25992060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_25991900_25992100
ES.18562.1	chr2	+	2858	1	Intergenic	novelGene_15409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGCTGACAACAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26005108	26007966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26005100_26008000
ES.18563.1	chr2	-	5426	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	12	0	intron_retention	FALSE	canonical	2	7	junction_4	16.3458710382775	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCCTGACCTTTGCTTG	8911	False	NA	0	True	AATAAA	-16	NA	26012818	25945546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_26012700
ES.18563.10	chr2	-	2792	7	NNC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	2082	intron_retention	FALSE	canonical	0	0	junction_5	16.0312195418814	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCGAGAGACTAGTGT	8907	False	NA	NA	False	NA	NA	NA	26012822	25948993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980042_25980172_25980495_26012700
ES.18563.11	chr2	-	3970	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	2	2054	intron_retention	FALSE	canonical	3	39	junction_3	4.09267638593623	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	8931	False	NA	NA	False	NA	NA	NA	26012798	25949021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ES.18563.12	chr2	-	2730	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	2054	intron_retention	FALSE	canonical	0	0	junction_3	18.8812075884992	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	8907	False	NA	NA	False	NA	NA	NA	26012822	25949021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25979554_25980495_26012700
ES.18563.13	chr2	-	4925	4	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	24466	3476	-5221	2053	3prime_fragment	FALSE	canonical	3	40	junction_1	3.74165738677394	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25957723	25949022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465
ES.18563.14	chr2	-	2043	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	67	4268	32	1261	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATGCATTCATTATAC	8966	False	NA	NA	False	TTTAAA	-13	NA	26012763	25949814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ES.18563.2	chr2	-	6343	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	34	1	-1	-1	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTCCTGACCTTTGCTT	8933	False	NA	-1	True	AATAAA	-15	NA	26012796	25945547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ES.18563.3	chr2	-	6287	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	8	-2	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTCCTGACCTTTGCT	8907	False	NA	-2	True	AATAAA	-14	NA	26012822	25945548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
ES.18563.4	chr2	-	3963	3	NNC	ENSMUSG00000026932.15	novel	351	3	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTTCCTGACCTTTGC	8852	False	NA	-3	True	AATAAA	-13	NA	26012877	25945549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25949125_25980283_25980495_26012700
ES.18563.5	chr2	-	6708	6	FSM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	-40	7	-40	-7	multi-exon	FALSE	canonical	2	3	junction_5	16.2775919595006	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCTTTCCTGACCT	1034	False	NA	-7	True	AATAAA	-9	NA	25982229	25945553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_25981762
ES.18563.6	chr2	-	2870	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	-15	2087	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8884	False	NA	NA	False	NA	NA	NA	26012845	25948988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
ES.18563.7	chr2	-	2988	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	-52	3442	-52	2087	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8847	False	NA	NA	False	NA	NA	NA	26012882	25948988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ES.18563.8	chr2	-	3001	6	NNC	ENSMUSG00000026932.15	novel	6675	6	NA	NA	11575	2087	intron_retention	FALSE	canonical	1	2	junction_5	16.6685332288117	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	4104	False	NA	NA	False	NA	NA	NA	26001220	25948988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26001025
ES.18563.9	chr2	-	2004	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	-8	2087	intron_retention	FALSE	canonical	2	7	junction_4	16.3458710382775	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGAGACTAGTGTCCCTG	8891	False	NA	NA	False	NA	NA	NA	26012838	25948988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_26012700
ES.18564.1	chr2	+	180	1	Intergenic	novelGene_15410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	26017416	26017596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26017400_26017600
ES.18565.1	chr2	-	2512	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	-28	-1	-28	1	multi-exon	FALSE	canonical	3	70	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAGTGATTGCTTACGT	NA	False	NA	-5	True	ATTAAA	-20	NA	26030561	26026824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26028926_26030150
ES.18565.2	chr2	-	3703	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1714	-1569	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030528	26026825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26026800_26030500
ES.18565.3	chr2	-	3255	2	NNC	ENSMUSG00000087679.3	novel	2483	2	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGATGGAGTGATTGCTT	NA	False	NA	-9	True	ATTAAA	-16	NA	26030546	26026828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26028926_26029388
ES.18565.4	chr2	-	2972	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-1693	-859	26	-710	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTTACTAGTCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	26030507	26027535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26027500_26030500
ES.18566.1	chr2	-	159	1	Intergenic	novelGene_15411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	-28	True	NA	NA	NA	26035049	26034890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26034900_26035000
ES.18567.1	chr2	+	203	1	Intergenic	novelGene_15412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTCTGCCATCTGTAGT	NA	False	NA	NA	False	NA	NA	NA	26123515	26123718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26123500_26123700
ES.18568.1	chr2	-	4061	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	-22	0	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	26127559	26099136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.10	chr2	-	5047	11	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	159	-10	intron_retention	FALSE	canonical	3	117	junction_2	7.45922247958861	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTAAAGTTGTTTCAG	NA	False	NA	NA	False	AATAAA	-11	NA	26127378	26099146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.11	chr2	-	2886	12	ISM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	132	1021	132	-1021	5prime_fragment	FALSE	canonical	3	117	junction_2	7.1269480445526	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTAAGTCTACATTTCT	NA	False	NA	28	True	NA	NA	NA	26127405	26100157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.12	chr2	-	2556	13	NNC	ENSMUSG00000036327.19	novel	4011	9	NA	NA	149	-1021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.6957271203186	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTAAGTCTACATTTCT	NA	False	NA	28	True	NA	NA	NA	26127388	26100157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26100973_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.14	chr2	-	2365	12	ISM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	49	1625	49	-1625	5prime_fragment	FALSE	canonical	3	117	junction_2	7.1269480445526	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTCCTCACCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	26127488	26100761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.15	chr2	-	1830	6	NNC	ENSMUSG00000036327.19	novel	4011	9	NA	NA	108	-13903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5265647077743	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATAATGTTACTTTC	NA	False	NA	NA	False	NA	NA	NA	26127429	26113039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26114148_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.2	chr2	-	4051	11	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	135	-2	intron_retention	FALSE	canonical	3	117	junction_2	7.32734604068895	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTCAGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	26127402	26099138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.3	chr2	-	3766	13	NNC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.2399877019571	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTTCAGTTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	26127576	26099139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26100973_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110916_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.4	chr2	-	2405	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	150	4	150	-4	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTGTTTCAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	26127387	26099140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.5	chr2	-	3729	11	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	170	-5	intron_retention	FALSE	canonical	0	0	junction_5	40.0049996875391	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTGTTTCAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	26127367	26099141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ES.18568.6	chr2	-	3768	11	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	164	-6	intron_retention	FALSE	canonical	0	0	junction_10	39.6344547079936	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGTTGTTTCAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	26127373	26099142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26127054
ES.18569.1	chr2	+	206	1	Intergenic	novelGene_15413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTGAGGTTGTGCACA	NA	False	NA	NA	False	NA	NA	NA	26176901	26177107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26176900_26177100
ES.1857.1	chr1	-	7305	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	-48	-11	-48	11	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAGACAAAAACAAATGA	NA	False	NA	13	True	AATAAA	-29	NA	170695388	170532231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
ES.1857.11	chr1	-	2761	17	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-856	-4824	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	19.1861766644634	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTTTCTCTCTCCTT	NA	False	NA	NA	False	TTTAAA	-33	NA	170696196	170537066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218_170695445_170695961
ES.1857.13	chr1	-	1378	1	NIC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-5808	-6515	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTGAAAGATGTAAC	NA	False	NA	NA	False	NA	NA	NA	170627748	170626370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170626400_170627700
ES.1857.14	chr1	-	183	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTCAT	8034	False	NA	NA	False	NA	NA	NA	170636351	170636168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_170636200_170636400
ES.1857.15	chr1	-	160	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAGTAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	170653999	170653839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_170653800_170654000
ES.1857.4	chr1	-	4844	17	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-836	-2721	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	19.1861766644634	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTTAACTTCGCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	170696176	170534963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218_170695445_170695961
ES.1857.6	chr1	-	3599	17	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	-872	-4002	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	19.1861766644634	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGTATTTTGCCTG	NA	False	NA	6	True	AAAAAG	-20	NA	170696212	170536244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218_170695445_170695961
ES.18570.1	chr2	+	4694	4	NIC	ENSMUSG00000026930.16	novel	3127	13	NA	NA	-52	853	intron_retention	FALSE	canonical	3	12	junction_1	0.471404520791032	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGTGCCAAAGTAACAG	NA	False	NA	NA	False	NA	NA	NA	26205474	26218551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26205733_26212425_26215505_26216225_26216335_26217303
ES.18570.2	chr2	+	3427	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	-43	0	-43	0	multi-exon	FALSE	canonical	1	3	junction_2	5.66521619677599	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26205483	26238249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
ES.18570.3	chr2	+	3302	14	NNC	ENSMUSG00000026930.16	novel	3384	14	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.36093848905478	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGGCTTCTGTTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	26205593	26238246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230585_26234613_26234771_26235162_26235372_26236818
ES.18570.4	chr2	+	2139	6	NNC	ENSMUSG00000026930.16	novel	834	3	NA	NA	-193	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.47584804016684	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGCTTCTGTTGGAA	8982	False	NA	NA	False	AATAAA	-13	NA	26215662	26238247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26215774_26216225_26216335_26217303_26217428_26234613_26234771_26235162_26235372_26236818
ES.18570.5	chr2	+	2354	8	NNC	ENSMUSG00000026930.16	novel	794	4	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.63183450811033	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTCTGTTGGAAT	9019	False	NA	NA	False	AATAAA	-14	NA	26215699	26238248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26215774_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
ES.18570.6	chr2	+	2025	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	-88	-960	-88	-2	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGCTTCTGTTGGAA	NA	False	NA	NA	False	AATAAA	-13	NA	26232212	26238247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
ES.18570.7	chr2	+	1980	4	NNC	ENSMUSG00000026930.16	novel	977	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.10433352249844	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTCTGTTGGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	26232302	26238248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26232487_26234613_26234771_26235162_26235372_26236818
ES.18570.8	chr2	+	2592	3	FSM	ENSMUSG00000026930.16	ENSMUST00000142057.2	834	3	-432	-1326	-432	-1	multi-exon	FALSE	canonical	3	17	junction_1	2	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTTCTGTTGGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	26233817	26238248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26234771_26235162_26235372_26236818
ES.18571.1	chr2	-	3938	1	Intergenic	novelGene_15414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGATTCTGGTTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	26227227	26223289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26223300_26227200
ES.18572.10	chr2	-	1506	2	NIC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	11	-2165	intron_retention	FALSE	canonical	3	313	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTCCTGTTTTTCTC	NA	False	NA	-14	True	AGTAAA	-25	NA	26242101	26240297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26241487_26241784
ES.18572.11	chr2	-	584	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	16	2166	16	-2166	multi-exon	FALSE	canonical	3	60	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCCTGTTTTTCT	NA	False	NA	-15	True	AGTAAA	-24	NA	26242096	26240298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26240571_26241784
ES.18572.2	chr2	-	2931	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	21	-36	11	36	multi-exon	FALSE	canonical	3	313	junction_2	24.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCTAGTATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	26242101	26238096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26240571_26241346_26241487_26241784
ES.18572.4	chr2	-	2778	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	20	-32	20	32	multi-exon	FALSE	canonical	3	60	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTGCTCTAGTATCTG	NA	False	NA	NA	False	NA	NA	NA	26242092	26238100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26240571_26241784
ES.18572.5	chr2	-	2128	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	21	767	11	-767	multi-exon	FALSE	canonical	3	313	junction_2	24.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGGCCAGACCAGCG	NA	False	NA	NA	False	AGTAAA	-22	NA	26242101	26238899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26240571_26241346_26241487_26241784
ES.18572.8	chr2	-	784	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	-21	2153	-21	-2153	multi-exon	FALSE	canonical	3	313	junction_2	24.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCTTGTGAAGTCAG	NA	False	NA	-2	True	AGTAAA	-37	NA	26242143	26240285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26240571_26241346_26241487_26241784
ES.18573.1	chr2	+	4256	1	Genic_Genomic	ENSMUSG00000086779.2	novel	NA	NA	NA	NA	-228	-13091	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGACTACTGCTCCAG	NA	False	NA	NA	False	NA	NA	NA	26242428	26246684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_26242400_26246700
ES.18574.1	chr2	-	1192	9	NNC	ENSMUSG00000026928.15	novel	1947	12	NA	NA	2071	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.54921462739214	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTGGTTGGATATGC	NA	False	NA	NA	False	AATAAA	-16	NA	26247688	26242199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244936_26245344_26245537_26246769_26246896_26247196_26247341_26247476
ES.18574.2	chr2	-	1421	7	NNC	ENSMUSG00000026928.15	novel	1947	12	NA	NA	2095	-1	intron_retention	FALSE	canonical	0	0	junction_4	11	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTGGTTGGATATGC	NA	False	NA	NA	False	AATAAA	-16	NA	26247664	26242199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26242424_26242496_26243027_26244368_26244418_26244841_26244936_26245344_26245537_26247196_26247341_26247476
ES.18574.3	chr2	-	1094	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2117	12	2117	-1	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTGGTTGGATATGC	NA	False	NA	NA	False	AATAAA	-16	NA	26247642	26242199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
ES.18574.4	chr2	-	1048	8	NIC	ENSMUSG00000026928.15	novel	1947	12	NA	NA	2087	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.74574737189174	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGTTGGTTGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	26247672	26242201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26242424_26242496_26242574_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
ES.18575.1	chr2	-	7921	18	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_2	13.0810621453768	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270646	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.10	chr2	-	4485	24	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	20.1910534381294	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270646	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26256986_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.13	chr2	-	7210	19	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_13	17.6966900720494	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270620	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266073_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.14	chr2	-	5326	22	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_15	17.3977088177968	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270639	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264573_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26268080_26268505_26268649_26270560
ES.18575.15	chr2	-	4415	5	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-1664	0	intron_retention	FALSE	canonical	3	53	junction_1	7.29725975966321	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26259446	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150
ES.18575.17	chr2	-	4422	24	NNC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.8928768719338	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATAGCCTTTGGTGAT	NA	False	NA	-5	True	AATAAA	-29	NA	26270637	26252778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257018_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263483_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.18	chr2	-	7727	20	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	24	junction_19	13.3891261126685	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTATAGCCTTTGGTGA	NA	False	NA	-6	True	AATAAA	-28	NA	26270639	26252779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26268080_26268505_26268645_26270560
ES.18575.19	chr2	-	7556	18	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	31	junction_2	13.2393457850684	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270668	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.2	chr2	-	6245	21	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	12	junction_2	17.8409640995099	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270646	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.20	chr2	-	4324	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.9429454790451	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270646	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263458_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.21	chr2	-	5605	22	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	12	junction_4	16.5533563195558	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270650	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.22	chr2	-	4367	23	FSM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	1	-5	1	-2	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270664	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.23	chr2	-	4903	22	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	40	junction_10	11.0732461385698	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270646	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.24	chr2	-	4382	23	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-3	-2	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_5	19.0513117485081	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270650	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257323_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.25	chr2	-	7975	19	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	45	junction_14	10.5819844576397	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270646	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26262838_26262985_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26268080_26268505_26268649_26270560
ES.18575.27	chr2	-	4345	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	15.9923147865281	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270646	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.28	chr2	-	4697	23	NIC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_21	17.8959919793684	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTATAGCCTTTGGTG	NA	False	NA	-7	True	AATAAA	-27	NA	26270637	26252780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268172_26268649_26270560
ES.18575.29	chr2	-	5512	23	NNC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_20	26.2393622680012	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATGTATAGCCTTT	NA	False	NA	-11	True	AATAAA	-23	NA	26270637	26252784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256449_26256986_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268172_26268292_26268505_26268649_26270560
ES.18575.3	chr2	-	5223	10	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	855	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	20.3748816553406	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26262512	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797
ES.18575.30	chr2	-	5575	22	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	20.3904072417152	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26257137_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.31	chr2	-	5297	20	NIC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	20.4179324800285	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270650	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.32	chr2	-	7031	19	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	21.9077752700714	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26257314_26257746_26257818_26258155_26258484_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26268080_26268505_26268645_26270560
ES.18575.34	chr2	-	4956	23	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_4	21.2875336971921	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270637	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257027_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.35	chr2	-	5010	23	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_4	20.2227267618872	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257027_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.36	chr2	-	4593	25	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	24.7302109439716	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270637	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26256986_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26263653_26263752_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.37	chr2	-	3988	20	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1943	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	22.9311869553247	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26266693	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26256986_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611
ES.18575.38	chr2	-	4955	22	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_20	19.5219511310657	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268461_26268645_26270560
ES.18575.39	chr2	-	6170	20	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	12	junction_3	19.7138813812393	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.4	chr2	-	4318	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	14.8107203746654	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270639	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.41	chr2	-	4730	22	NIC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	13.4251937663633	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270637	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.42	chr2	-	5559	20	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	2773	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	16.2542131763854	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26267865	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880
ES.18575.43	chr2	-	4999	23	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	22.9924529479128	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264573_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.45	chr2	-	4347	23	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.0364824872152	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270637	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266154_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.47	chr2	-	7860	19	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_18	13.6414627578145	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270637	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.48	chr2	-	7810	20	NNC	ENSMUSG00000036281.14	novel	4363	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	12	junction_3	16.7265774548113	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.49	chr2	-	4456	24	FSM	ENSMUSG00000036281.14	ENSMUST00000149850.8	4459	24	5	-2	-1	0	multi-exon	FALSE	canonical	1	1	junction_21	20.3013218115665	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270639	26252785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268172_26268292_26268505_26268649_26270560
ES.18575.5	chr2	-	5456	23	NIC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_20	20.5579708456174	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270646	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26268080_26268172_26268292_26268505_26268649_26270560
ES.18575.50	chr2	-	6756	21	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1	junction_13	16.9837422260231	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCAATGTATAGCCT	NA	False	NA	-13	True	AATAAA	-21	NA	26270659	26252786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26262838_26262985_26263093_26263330_26264198_26264503_26264573_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.51	chr2	-	5929	21	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	12	junction_3	17.4793449534014	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCAATGTATAGCCT	NA	False	NA	-13	True	AATAAA	-21	NA	26270637	26252786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.52	chr2	-	5028	23	NNC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	3	junction_4	21.718760219095	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCAATGTATAGCC	NA	False	NA	-14	True	AATAAA	-20	NA	26270646	26252787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26256986_26257123_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.6	chr2	-	4510	24	NIC	ENSMUSG00000036281.14	novel	4459	24	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	20.9242038376179	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270660	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268172_26268292_26268505_26268649_26270560
ES.18575.7	chr2	-	4885	22	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	5	0	intron_retention	FALSE	canonical	3	13	junction_10	16.5447239673699	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270656	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262770_26262838_26262985_26263093_26263330_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18575.8	chr2	-	4395	23	NIC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	13.1962303658192	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270664	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ES.18575.9	chr2	-	4515	22	NNC	ENSMUSG00000036281.14	novel	4368	23	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_14	19.8189080336495	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270644	26252776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26253033_26253649_26253805_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26263093_26263330_26263479_26264032_26264198_26264503_26264573_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268645_26270560
ES.18576.1	chr2	+	4670	17	Fusion	ENSMUSG00000085767.2_ENSMUSG00000026926.15	novel	3135	13	NA	NA	-833	-1324	intron_retention	FALSE	canonical	0	0	junction_1	669.163423611901	951	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTGTCTGGCCACTAG	3372	False	NA	107	True	NA	NA	NA	26270704	26285810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_26270748_26271044_26271775_26275462_26275643_26276936_26277102_26277609_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.10	chr2	+	3221	10	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	3	-1397	intron_retention	TRUE	canonical	0	0	junction_4	635.578612635374	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTGTCTTTCAAACA	647	False	NA	34	True	AATGAA	-19	NA	26279353	26285737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26281191_26281640_26281762_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.11	chr2	+	4179	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3	-1047	3	1047	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	647	False	NA	NA	False	NA	NA	NA	26279353	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.12	chr2	+	5184	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	4	1	intron_retention	FALSE	canonical	3	1351	junction_3	115.360128223201	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	648	False	NA	20	True	AATAAA	-17	NA	26279354	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.13	chr2	+	3562	6	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	4	5	intron_retention	FALSE	canonical	3	1351	junction_3	117.567002173229	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGTCTTTTAGTTA	648	False	NA	NA	False	NA	NA	NA	26279354	26283958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.14	chr2	+	3863	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	4	-4	intron_retention	FALSE	canonical	3	1351	junction_6	99.2594579876396	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAGTGGATGCCCCTAG	648	False	NA	15	True	AATAAA	-12	NA	26279354	26287130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26281979_26282423_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.15	chr2	+	860	1	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	895	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTCCATTTTCTTTTT	648	False	NA	NA	False	ATTAAA	-20	NA	26279354	26280214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279400_26280200
ES.18576.16	chr2	+	3122	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	434.572299316619	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	648	False	NA	17	True	AATAAA	-14	NA	26279354	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283536_26283593_26285036_26285182_26285430
ES.18576.17	chr2	+	3385	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	4	-927	intron_retention	FALSE	canonical	3	1351	junction_5	103.602635935769	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCTTTGCCTCAGT	648	False	NA	39	True	NA	NA	NA	26279354	26286207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.18	chr2	+	7145	7	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	-3	1012	intron_retention	FALSE	canonical	3	1351	junction_5	105.843306616694	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	650	False	NA	NA	False	NA	NA	NA	26279356	26288146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308
ES.18576.19	chr2	+	4491	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1351	junction_4	108.29011958623	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	651	False	NA	17	True	AATAAA	-14	NA	26279357	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.2	chr2	+	5956	16	Fusion	ENSMUSG00000085767.2_ENSMUSG00000026926.15	novel	3135	13	NA	NA	-500	7	intron_retention	FALSE	canonical	0	0	junction_1	619.772560433799	969	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTAGGTGTCTGTACA	3705	False	NA	26	True	AATAAA	-23	NA	26271037	26287141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_26271775_26275462_26275643_26276945_26277102_26277609_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.21	chr2	+	5513	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-926	intron_retention	FALSE	canonical	3	1351	junction_4	104.218177739915	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTTTGCCTCAGTT	652	False	NA	40	True	NA	NA	NA	26279358	26286208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26283011_26283097_26283217_26283308_26283400_26283529_26285182_26285430
ES.18576.22	chr2	+	2862	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-1397	intron_retention	FALSE	canonical	3	1351	junction_6	113.673039899529	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTGTCTTTCAAACA	652	False	NA	34	True	AATGAA	-19	NA	26279358	26285737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.23	chr2	+	3815	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1351	junction_7	109.756002866765	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	652	False	NA	20	True	AATAAA	-17	NA	26279358	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.24	chr2	+	3127	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	426.447624438088	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	652	False	NA	21	True	AATAAA	-18	NA	26279358	26287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281097_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.25	chr2	+	1726	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-1398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	437.169009715414	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGTCTTTCAAAC	652	False	NA	33	True	AATGAA	-18	NA	26279358	26285736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283100_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.26	chr2	+	5355	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	1047	intron_retention	FALSE	canonical	3	1351	junction_5	103.602635935769	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	652	False	NA	NA	False	NA	NA	NA	26279358	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.27	chr2	+	4997	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	2	intron_retention	FALSE	canonical	3	1351	junction_4	109.684775607192	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	652	False	NA	21	True	AATAAA	-18	NA	26279358	26287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.28	chr2	+	8113	4	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	-1	1019	intron_retention	FALSE	canonical	3	1351	junction_2	147.205827179346	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	652	False	NA	NA	False	NA	NA	NA	26279358	26288153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26283011_26283097_26283217_26283308
ES.18576.3	chr2	+	5782	16	Fusion	ENSMUSG00000085767.2_ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1926	-1399	intron_retention	FALSE	canonical	0	0	junction_2	674.118683912558	951	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTTGTGTCTTTCAAA	6305	False	NA	32	True	AATGAA	-17	NA	26273637	26285735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_26275643_26276936_26277102_26277609_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26280863_26280999_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.30	chr2	+	4700	12	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	1012	intron_retention	FALSE	canonical	3	8	junction_5	452.498335689373	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	652	False	NA	NA	False	NA	NA	NA	26279358	26288146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281761_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.31	chr2	+	3374	12	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	8	2	-1	-2	intron_retention	FALSE	canonical	3	1351	junction_8	107.320944479477	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	652	False	NA	17	True	AATAAA	-14	NA	26279358	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.32	chr2	+	3156	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	435.389353210306	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	652	False	NA	21	True	AATAAA	-18	NA	26279358	26287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281850_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.33	chr2	+	5696	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	1047	intron_retention	FALSE	canonical	3	1351	junction_4	114.265176726091	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	652	False	NA	NA	False	NA	NA	NA	26279358	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.34	chr2	+	8644	3	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	-1	1047	intron_retention	FALSE	canonical	3	1351	junction_1	123.5	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	652	False	NA	NA	False	NA	NA	NA	26279358	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26283011_26283097_26283217_26283308
ES.18576.35	chr2	+	3123	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	434.981704596105	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	652	False	NA	17	True	AATAAA	-14	NA	26279358	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280310_26280495_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.36	chr2	+	3803	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1351	junction_6	112.840639842213	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	652	False	NA	20	True	AATAAA	-17	NA	26279358	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.37	chr2	+	4310	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	2	intron_retention	FALSE	canonical	3	1351	junction_5	103.602635935769	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	652	False	NA	21	True	AATAAA	-18	NA	26279358	26287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.38	chr2	+	2085	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	9	1041	0	-1041	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGCCTCATTTCTAA	653	False	NA	-75	True	NA	NA	NA	26279359	26286093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.39	chr2	+	5603	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	1047	intron_retention	FALSE	canonical	3	1351	junction_5	107.215612202701	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	653	False	NA	NA	False	NA	NA	NA	26279359	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.4	chr2	+	5337	18	Fusion	ENSMUSG00000085767.2_ENSMUSG00000026926.15	novel	3135	13	NA	NA	-21	1	intron_retention	FALSE	canonical	0	0	junction_2	727.553372636401	969	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	8210	False	NA	20	True	AATAAA	-17	NA	26275542	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_26275643_26276936_26277102_26277209_26277519_26277609_26277795_26278249_26278541_26278608_26279445_26279947_26280151_26280242_26280323_26280506_26280999_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.40	chr2	+	4927	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	1047	intron_retention	FALSE	canonical	3	1351	junction_7	97.6453275891888	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	654	False	NA	NA	False	NA	NA	NA	26279360	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.41	chr2	+	1834	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	2	-198	2	198	multi-exon	FALSE	canonical	3	1351	junction_8	100.774054200474	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAAAACTACTGCAA	655	False	NA	NA	False	AATAAA	-10	NA	26279361	26284151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.42	chr2	+	4219	11	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_6	683.760162630143	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	655	False	NA	17	True	AATAAA	-14	NA	26279361	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279465_26279947_26280151_26280242_26280323_26280506_26281191_26281761_26282688_26282917_26283021_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.43	chr2	+	1641	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	2	-5	2	5	multi-exon	FALSE	canonical	3	1351	junction_8	100.774054200474	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGTCTTTTAGTTA	655	False	NA	NA	False	NA	NA	NA	26279361	26283958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.44	chr2	+	2365	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	11	759	2	-759	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGCTATGGCTGTACT	655	False	NA	NA	False	NA	NA	NA	26279361	26286375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.45	chr2	+	3628	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	1351	junction_7	95.7629649423275	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	655	False	NA	20	True	AATAAA	-17	NA	26279361	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.46	chr2	+	3905	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1351	junction_5	102.998861314574	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	655	False	NA	18	True	AATAAA	-15	NA	26279361	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.47	chr2	+	5536	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	1047	intron_retention	FALSE	canonical	3	1351	junction_4	108.29011958623	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	655	False	NA	NA	False	NA	NA	NA	26279361	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.48	chr2	+	5036	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1351	junction_3	115.523299178396	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	655	False	NA	17	True	AATAAA	-14	NA	26279361	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.5	chr2	+	1696	2	Fusion	ENSMUSG00000026926.15_ENSMUSG00000085767.2	novel	851	4	NA	NA	-343	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	969	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	9793	False	NA	17	True	AATAAA	-14	NA	26277125	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_26278279_26286589
ES.18576.50	chr2	+	3242	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	433.780250306023	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGCCCCTAGGTGTCT	655	False	NA	21	True	AATAAA	-18	NA	26279361	26287136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281761_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.51	chr2	+	3745	12	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	8	junction_4	442.895245342629	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	655	False	NA	18	True	AATAAA	-15	NA	26279361	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281761_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.52	chr2	+	6131	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	2	1047	intron_retention	FALSE	canonical	3	1351	junction_4	112.943005312324	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	655	False	NA	NA	False	NA	NA	NA	26279361	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26283011_26283097_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.53	chr2	+	3314	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-758	intron_retention	FALSE	canonical	3	1351	junction_6	98.6247940428775	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCTATGGCTGTACTT	658	False	NA	NA	False	NA	NA	NA	26279364	26286376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.54	chr2	+	4320	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	1351	junction_6	101.68906857016	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	658	False	NA	18	True	AATAAA	-15	NA	26279364	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.55	chr2	+	5050	10	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_8	644.748089384864	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	658	False	NA	17	True	AATAAA	-14	NA	26279364	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281761_26283011_26283097_26283217_26283308_26283400_26283529_26284227_26285036_26285182_26285430
ES.18576.56	chr2	+	4604	10	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	635.578612635374	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	659	False	NA	17	True	AATAAA	-14	NA	26279365	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26281191_26281640_26281762_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.57	chr2	+	2417	8	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	1	4	intron_retention	FALSE	canonical	3	1351	junction_5	102.274740033791	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGTCTTTTAGTT	660	False	NA	NA	False	NA	NA	NA	26279366	26283957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.58	chr2	+	3624	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1351	junction_7	94.8629285158938	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	660	False	NA	18	True	AATAAA	-15	NA	26279366	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.59	chr2	+	4594	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1351	junction_4	113.727565628011	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	660	False	NA	18	True	AATAAA	-15	NA	26279366	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.60	chr2	+	3681	12	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	8	junction_5	452.498335689373	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	660	False	NA	20	True	AATAAA	-17	NA	26279366	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281761_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.61	chr2	+	6534	9	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	1	1047	intron_retention	FALSE	canonical	3	1351	junction_6	105.996167383543	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	660	False	NA	NA	False	NA	NA	NA	26279366	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.62	chr2	+	3240	14	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	560.199985423633	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	660	False	NA	19	True	AATAAA	-16	NA	26279366	26287134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281640_26281762_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.63	chr2	+	5090	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	1047	intron_retention	FALSE	canonical	3	1351	junction_6	115.340505022154	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	660	False	NA	NA	False	NA	NA	NA	26279366	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.64	chr2	+	6523	6	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	1012	intron_retention	FALSE	canonical	3	1351	junction_2	133.758887555183	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	661	False	NA	NA	False	NA	NA	NA	26279367	26288146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.65	chr2	+	8181	3	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	0	1047	intron_retention	FALSE	canonical	3	1584	junction_2	59	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	661	False	NA	NA	False	NA	NA	NA	26279367	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26283400_26283529
ES.18576.66	chr2	+	3649	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	-926	intron_retention	FALSE	canonical	3	1351	junction_3	115.721869240037	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTTTGCCTCAGTT	661	False	NA	40	True	NA	NA	NA	26279367	26286208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.67	chr2	+	3907	11	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	8	junction_5	473.47613456224	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	662	False	NA	18	True	AATAAA	-15	NA	26279368	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281761_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.69	chr2	+	1747	13	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	-1397	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	435.389353210306	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTGTCTTTCAAACA	662	False	NA	34	True	AATGAA	-19	NA	26279368	26285737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281850_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.7	chr2	+	2222	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	-14	927	-14	-927	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCTTTGCCTCAGT	630	False	NA	39	True	NA	NA	NA	26279336	26286207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.70	chr2	+	3906	4	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	1	3	intron_retention	FALSE	canonical	3	1351	junction_2	147.205827179346	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTGTCTTTTAGT	662	False	NA	NA	False	NA	NA	NA	26279368	26283956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26283011_26283097_26283217_26283308
ES.18576.72	chr2	+	4839	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	1	1047	intron_retention	FALSE	canonical	3	1351	junction_6	112.840639842213	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	662	False	NA	NA	False	NA	NA	NA	26279368	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.73	chr2	+	3984	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	19	-868	2	868	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAGCTGGCTTTGCCA	663	False	NA	NA	False	AAAAAG	-7	NA	26279369	26288002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.74	chr2	+	4660	9	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	8	junction_4	514.263247277112	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	664	False	NA	18	True	AATAAA	-15	NA	26279370	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281761_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036
ES.18576.75	chr2	+	3562	12	NNC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	453.700997399523	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	664	False	NA	17	True	AATAAA	-14	NA	26279370	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26279445_26279947_26280151_26280242_26280327_26280506_26280590_26281095_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.76	chr2	+	3582	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	20	-467	3	467	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTGCTCAAGGGCAAG	664	False	NA	NA	False	AATAAA	-20	NA	26279370	26287601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.77	chr2	+	6785	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	3	1045	intron_retention	FALSE	canonical	3	1351	junction_5	97.4877396137586	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTGGCCTCAACTTCA	664	False	NA	NA	False	NA	NA	NA	26279370	26288179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26285182_26285430
ES.18576.8	chr2	+	4577	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1351	junction_8	99.9138471859839	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	644	False	NA	17	True	AATAAA	-14	NA	26279350	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26285182_26285430
ES.18576.80	chr2	+	7219	7	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	4	1047	intron_retention	FALSE	canonical	3	1351	junction_4	106.443125136802	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	665	False	NA	NA	False	NA	NA	NA	26279371	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.81	chr2	+	7490	4	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	4	1047	intron_retention	FALSE	canonical	3	1540	junction_2	68.3975308196299	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	665	False	NA	NA	False	NA	NA	NA	26279371	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26283400_26283529
ES.18576.83	chr2	+	5111	11	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	5	1047	intron_retention	FALSE	canonical	3	1351	junction_6	98.6247940428775	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	666	False	NA	NA	False	NA	NA	NA	26279372	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.84	chr2	+	4328	9	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	15	-2	intron_retention	FALSE	canonical	3	1351	junction_4	108.495319599511	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	676	False	NA	17	True	AATAAA	-14	NA	26279382	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.85	chr2	+	7990	5	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	15	1012	intron_retention	FALSE	canonical	3	1351	junction_3	128.795137718782	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	676	False	NA	NA	False	NA	NA	NA	26279382	26288146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26283011_26283097_26283217_26283308
ES.18576.86	chr2	+	4556	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	18	-1	intron_retention	FALSE	canonical	3	1351	junction_3	115.721869240037	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATGCCCCTAGGTG	679	False	NA	18	True	AATAAA	-15	NA	26279385	26287133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.87	chr2	+	6409	8	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	22	1	intron_retention	FALSE	canonical	3	1351	junction_4	104.218177739915	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGCCCCTAGGTGTC	683	False	NA	20	True	AATAAA	-17	NA	26279389	26287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26283011_26283097_26283217_26283308_26283400_26283529_26285182_26285430
ES.18576.88	chr2	+	4728	10	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	26	-2	intron_retention	FALSE	canonical	3	1351	junction_5	103.709827861499	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGGATGCCCCTAGGT	687	False	NA	17	True	AATAAA	-14	NA	26279393	26287132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.9	chr2	+	7054	8	NIC	ENSMUSG00000026926.15	novel	1638	11	NA	NA	2	1047	intron_retention	FALSE	canonical	3	1351	junction_5	98.9295770964872	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGCCTCAACTTCACT	646	False	NA	NA	False	NA	NA	NA	26279352	26288181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529
ES.18576.90	chr2	+	2788	7	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	-40	-759	intron_retention	FALSE	canonical	3	1351	junction_2	94.7569991551489	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGCTATGGCTGTACT	2192	False	NA	NA	False	NA	NA	NA	26280898	26286375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26281191_26281877_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ES.18576.91	chr2	+	7179	1	Genic_Genomic	ENSMUSG00000026926.15	novel	NA	NA	NA	NA	29	1012	mono-exon	FALSE	NA	NA	NA	NA	NA	968	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2261	False	NA	NA	False	NA	NA	NA	26280967	26288146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_26281000_26288100
ES.18577.1	chr2	+	177	1	Intergenic	novelGene_15415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	26294025	26294202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26294000_26294200
ES.18578.1	chr2	-	3187	6	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	1	6	intron_retention	FALSE	canonical	3	120	junction_5	97.638107314716	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGTCATTTACTCAG	NA	False	NA	3	True	AATAAA	-19	NA	26279315	26272807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26279160
ES.18578.10	chr2	-	2699	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	3	intron_retention	FALSE	canonical	3	120	junction_5	97.679885339818	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279318	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26276076_26276915_26277324_26277567_26277684_26279160
ES.18578.11	chr2	-	2761	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	-3	2	intron_retention	FALSE	canonical	3	146	junction_6	81.7598108282221	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTTGTCATTTAC	NA	False	NA	-1	True	AATAAA	-15	NA	26279312	26272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.12	chr2	-	3223	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	146	junction_6	81.7443508071896	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTTGTCATTTAC	NA	False	NA	-1	True	AATAAA	-15	NA	26279314	26272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275622_26276001_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.13	chr2	-	3040	7	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	4	2	intron_retention	FALSE	canonical	3	27	junction_5	143.653518346518	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTTGTCATTTAC	NA	False	NA	-1	True	AATAAA	-15	NA	26279299	26272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597_26279078_26279160
ES.18578.14	chr2	-	2249	7	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	15	2	intron_retention	FALSE	canonical	3	9	junction_3	141.787105666677	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTTGTCATTTAC	NA	False	NA	-1	True	AATAAA	-15	NA	26279264	26272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26276076_26276915_26277324_26277567_26277684_26279160
ES.18578.15	chr2	-	3251	7	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	146	junction_6	81.7414623472486	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGTCTTGTCATTTAC	NA	False	NA	-1	True	AATAAA	-15	NA	26279314	26272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.16	chr2	-	4192	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	268	junction_4	47.3359007519663	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279317	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503
ES.18578.17	chr2	-	3943	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	6	junction_3	172.262880505349	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279314	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26278927_26279078_26279160
ES.18578.18	chr2	-	4366	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	27	junction_3	162.899423639933	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279324	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26278597
ES.18578.19	chr2	-	5015	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	343	junction_3	21.6999743983464	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279320	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567
ES.18578.2	chr2	-	1976	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	-18	-3	1	3	multi-exon	FALSE	canonical	3	120	junction_7	82.5556089640708	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279327	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
ES.18578.20	chr2	-	2896	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	96	junction_6	96.1087347169282	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279324	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26276076_26276915_26277684_26278503_26278573_26278927
ES.18578.21	chr2	-	2903	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_6	121.992713807925	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279314	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26276076_26276915_26277324_26277567_26277684_26278597
ES.18578.23	chr2	-	3395	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	51	junction_7	124.947662512537	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279310	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.24	chr2	-	3155	5	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6	junction_4	151.177048522585	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279283	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26276076_26276915_26277324_26277567_26277684_26278927
ES.18578.25	chr2	-	3434	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	120	junction_4	107.185295166828	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279324	26272813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277684_26279160
ES.18578.27	chr2	-	3966	6	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_5	146.578852499261	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279307	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26273707_26274693_26277324_26277567_26277684_26278503_26278573_26278927_26279040_26279160
ES.18578.29	chr2	-	4104	4	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	146	junction_3	102.07187010468	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279313	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277684_26278503_26278573_26279160
ES.18578.30	chr2	-	3516	5	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	120	junction_4	109.161291216255	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26279160
ES.18578.31	chr2	-	3783	4	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	120	junction_3	119.589111358667	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279305	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26279160
ES.18578.32	chr2	-	2422	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_7	75.6981114799613	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279328	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.33	chr2	-	4877	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	306	junction_2	36.9353790047188	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279302	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26275622_26276001_26277324_26277567
ES.18578.34	chr2	-	2257	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	146	junction_7	74.0135122798533	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26278503_26278573_26279160
ES.18578.35	chr2	-	1950	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_2	124.574377422502	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.36	chr2	-	2213	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	120	junction_6	87.5817078821574	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279324	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26279160
ES.18578.37	chr2	-	2120	10	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	9	junction_3	137.106969143273	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.38	chr2	-	3585	6	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	146	junction_5	89.5419454780831	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279299	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.39	chr2	-	5091	4	NIC	ENSMUSG00000026927.18	novel	2095	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	27	junction_3	154.670258578981	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279324	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26274834_26275094_26277324_26277567_26277684_26278597
ES.18578.4	chr2	-	2045	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	-11	-3	1	3	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279327	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.40	chr2	-	3482	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_6	98.2966033096883	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279315	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26278927
ES.18578.41	chr2	-	3988	6	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	27	junction_4	162.39039380456	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279291	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278597_26279078_26279160
ES.18578.43	chr2	-	3761	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	299	junction_4	36.4362456902464	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279287	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275622_26276001_26276076_26276915_26277324_26277567
ES.18578.45	chr2	-	2494	7	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	15	0	intron_retention	FALSE	canonical	3	6	junction_6	129.562082930668	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279264	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278927
ES.18578.46	chr2	-	5033	2	FSM	ENSMUSG00000026927.18	ENSMUST00000140115.2	806	2	-17	-4210	4	0	multi-exon	FALSE	canonical	3	120	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279324	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26277684_26279160
ES.18578.47	chr2	-	2519	9	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_3	143.110970928158	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279318	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.48	chr2	-	2586	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	96	junction_7	91.0270199849854	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279287	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927
ES.18578.49	chr2	-	3968	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	51	junction_5	135.471620644325	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279271	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.5	chr2	-	2544	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-4	3	intron_retention	FALSE	canonical	3	27	junction_7	113.093784451811	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279332	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597
ES.18578.50	chr2	-	3717	6	NIC	ENSMUSG00000026927.18	novel	2095	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	27	junction_5	133.55238672521	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279289	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278597
ES.18578.51	chr2	-	3766	4	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	120	junction_3	123.64465212859	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279305	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277684_26279160
ES.18578.52	chr2	-	4159	3	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	120	junction_2	89.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279290	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26276076_26276915_26277684_26279160
ES.18578.53	chr2	-	3099	5	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_2	161.21879543031	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279297	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275509_26277324_26277567_26277684_26279160
ES.18578.54	chr2	-	2356	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	9	junction_3	127.725151343478	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279305	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.55	chr2	-	4017	3	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_2	138	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26279295	26272814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277684_26279160
ES.18578.56	chr2	-	2447	9	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	-2	intron_retention	FALSE	canonical	3	27	junction_7	132.397070870167	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279324	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597_26279078_26279160
ES.18578.57	chr2	-	2391	9	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	1	-2	intron_retention	FALSE	canonical	2	11	junction_8	140.748834364623	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279306	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278597_26279040_26279160
ES.18578.58	chr2	-	2819	7	NIC	ENSMUSG00000026927.18	novel	2099	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	6	junction_5	155.298368740091	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279294	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26276076_26276915_26277324_26277567_26277684_26278927_26279078_26279160
ES.18578.59	chr2	-	3754	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	51	junction_6	133.538592008286	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279320	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.6	chr2	-	2194	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	2	-3	2	3	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279326	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.60	chr2	-	3860	5	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	146	junction_4	93.8785784937118	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279315	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.61	chr2	-	5521	2	FSM	ENSMUSG00000026927.18	ENSMUST00000134737.2	672	2	-4099	-750	4	-2	multi-exon	FALSE	canonical	3	396	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279324	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693
ES.18578.62	chr2	-	5235	3	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	4	3	4	-2	intron_retention	FALSE	canonical	3	366	junction_2	15	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279299	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26273707_26274693_26274834_26275094
ES.18578.63	chr2	-	5258	3	NIC	ENSMUSG00000026927.18	novel	2095	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	343	junction_2	26.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279305	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26277324_26277567
ES.18578.64	chr2	-	4092	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	27	junction_4	148.991610502068	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279314	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278597
ES.18578.65	chr2	-	2077	9	FSM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	19	3	-5	-2	multi-exon	FALSE	canonical	3	6	junction_7	137.145907704167	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279284	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278927_26279078_26279160
ES.18578.67	chr2	-	3982	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	5	-2	intron_retention	FALSE	canonical	3	27	junction_4	142.770795332939	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279323	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26275622_26276001_26277324_26277567_26277684_26278597
ES.18578.68	chr2	-	3334	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	6	junction_5	155.671395360013	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279321	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278927_26279078_26279160
ES.18578.69	chr2	-	2782	7	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	4	-2	intron_retention	FALSE	canonical	3	120	junction_6	89.1309897473002	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279299	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26277324_26277567_26277684_26279160
ES.18578.7	chr2	-	2879	9	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	4	3	intron_retention	FALSE	canonical	0	0	junction_1	147.061158621167	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279324	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26273707_26274689_26274834_26275094_26275158_26275509_26276379_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.70	chr2	-	5596	2	NIC	ENSMUSG00000026927.18	novel	432	3	NA	NA	2	-2	intron_retention	FALSE	canonical	3	27	junction_1	0	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGACTGTCTTGTCA	NA	False	NA	-6	True	AATAAA	-10	NA	26279326	26272816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26277684_26278597
ES.18578.71	chr2	-	1599	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	40	554	7	199	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGTAACAAGCTTC	NA	False	NA	NA	False	TATAAA	-19	NA	26279288	26273367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ES.18578.72	chr2	-	3031	6	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	3	197	intron_retention	FALSE	canonical	3	146	junction_5	89.5419454780831	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACAGTTTTGTAACAAGCT	NA	False	NA	NA	False	TATAAA	-17	NA	26279300	26273369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.73	chr2	-	2973	5	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	2	194	intron_retention	FALSE	canonical	3	120	junction_4	109.161291216255	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGACAGTTTTGTAACAA	NA	False	NA	NA	False	TATAAA	-14	NA	26279314	26273372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26279160
ES.18578.74	chr2	-	1683	9	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	1	193	intron_retention	FALSE	canonical	0	0	junction_5	130.058640620299	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGACAGTTTTGTAACA	NA	False	NA	NA	False	TATAAA	-13	NA	26279306	26273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276926_26277324_26277567_26277684_26278503_26278573_26278927
ES.18578.75	chr2	-	1480	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	-9	560	3	193	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGACAGTTTTGTAACA	NA	False	NA	NA	False	TATAAA	-13	NA	26279325	26273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.76	chr2	-	1617	8	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	4	561	4	192	intron_retention	FALSE	canonical	3	6	junction_7	120.135297876679	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGACAGTTTTGTAAC	NA	False	NA	NA	False	TATAAA	-12	NA	26279299	26273374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278927
ES.18578.8	chr2	-	2857	8	NIC	ENSMUSG00000026927.18	novel	2031	9	NA	NA	4	3	intron_retention	FALSE	canonical	3	146	junction_7	75.6811248136629	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279299	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26277324_26277567_26277684_26278503_26278573_26279160
ES.18578.9	chr2	-	1890	8	NIC	ENSMUSG00000026927.18	novel	1955	8	NA	NA	-5	3	intron_retention	FALSE	canonical	3	9	junction_3	132.453457362754	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTTGTCATTTACT	NA	False	NA	0	True	AATAAA	-16	NA	26279284	26272810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275552_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
ES.18579.1	chr2	-	3725	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	-25	9	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	958	False	NA	NA	False	NA	NA	NA	26299240	26286518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
ES.18579.10	chr2	-	3730	10	NNC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_1	20.9502644433648	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	1036	False	NA	3	True	AATAAA	-23	NA	26299162	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26287937_26288567_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26291797_26291871_26292111_26292236_26297778_26298822_26299013
ES.18579.11	chr2	-	3723	9	NNC	ENSMUSG00000026925.17	novel	3413	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_7	14.1724865496496	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	983	False	NA	3	True	AATAAA	-23	NA	26299215	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26287984_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26291797_26292236_26297778
ES.18579.12	chr2	-	3153	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	983	False	NA	3	True	AATAAA	-23	NA	26299215	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
ES.18579.13	chr2	-	2922	7	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_3	15.9626299698877	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	1016	False	NA	3	True	AATAAA	-23	NA	26299182	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.14	chr2	-	2521	11	NNC	ENSMUSG00000026925.17	novel	3413	10	NA	NA	821	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.4426275272537	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	1880	False	NA	3	True	AATAAA	-23	NA	26298318	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26291797_26291871_26292111_26292236_26297778
ES.18579.15	chr2	-	3394	9	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	30	junction_1	7.94414092271782	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	998	False	NA	3	True	AATAAA	-23	NA	26299200	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.16	chr2	-	3387	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	-45	805	-42	0	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	941	False	NA	3	True	AATAAA	-23	NA	26299257	26287065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.2	chr2	-	3899	9	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	-19	9	intron_retention	FALSE	canonical	3	30	junction_1	7.94414092271782	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCAGTTTGGTGCTTC	1040	False	NA	NA	False	NA	NA	NA	26299158	26286518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.3	chr2	-	4401	8	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	-4	8	intron_retention	FALSE	canonical	3	30	junction_1	7.87400787401181	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTTTGGTGCTT	998	False	NA	NA	False	NA	NA	NA	26299200	26286519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.4	chr2	-	3997	10	NNC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	12	8	intron_retention	FALSE	canonical	0	0	junction_8	17.3319087733693	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTTTGGTGCTT	1014	False	NA	NA	False	NA	NA	NA	26299184	26286519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26287984_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26291797_26291871_26292111_26292236_26297778
ES.18579.6	chr2	-	3724	9	NIC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	-17	8	intron_retention	FALSE	canonical	1	1	junction_4	15.2228241466556	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTTTGGTGCTT	1042	False	NA	NA	False	NA	NA	NA	26299156	26286519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.7	chr2	-	2845	9	NNC	ENSMUSG00000026925.17	novel	4147	10	NA	NA	27	5	intron_retention	FALSE	canonical	0	0	junction_1	15.3495724696162	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCCAGCAGTTTGGTG	1029	False	NA	NA	False	NA	NA	NA	26299169	26286522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26286923_26288567_26288705_26289244_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.8	chr2	-	3663	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	-3	487	0	-220	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGGGAAGACAGCCT	983	False	NA	NA	False	AATAAA	-18	NA	26299215	26286747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ES.18579.9	chr2	-	3425	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	24	-223	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTACTGGGAAGACAG	1026	False	NA	NA	False	AATAAA	-15	NA	26299172	26286750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
ES.1858.1	chr1	+	2047	1	NIC	ENSMUSG00000053925.5	novel	1671	2	NA	NA	57	-10973	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGAAATCACACCTTAG	6259	False	NA	NA	False	AAAAAG	-4	NA	170696270	170698317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_170696300_170698300
ES.18580.1	chr2	-	8768	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	-29	-2	-29	0	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335257	26299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.10	chr2	-	5579	15	NIC	ENSMUSG00000026924.18	novel	4176	23	NA	NA	1137	-1	intron_retention	FALSE	canonical	3	97	junction_2	24.2911758564668	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTATGGCTTCCTTTGT	NA	False	NA	-3	True	AATAAA	-24	NA	26318387	26299445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26304382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151
ES.18580.11	chr2	-	8923	30	NNC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	13	-1	intron_retention	FALSE	canonical	3	8	junction_1	37.5559511252572	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTATGGCTTCCTTTGT	NA	False	NA	-3	True	AATAAA	-24	NA	26335199	26299445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26301182_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.12	chr2	-	7803	30	NNC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	57.1532141964434	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTATGGCTTCCTTTG	NA	False	NA	-4	True	AATAAA	-23	NA	26335240	26299446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320262_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26328831_26329526_26332083_26335086
ES.18580.13	chr2	-	9013	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	8	junction_1	38.9431066500293	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTATGGCTTCCTTT	NA	False	NA	-5	True	AATAAA	-22	NA	26335231	26299447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26301182_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.14	chr2	-	8627	29	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	13	-3	intron_retention	FALSE	canonical	0	0	junction_1	37.0938550387076	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTATGGCTTCCTTT	NA	False	NA	-5	True	AATAAA	-22	NA	26335199	26299447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.15	chr2	-	8863	32	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	8	junction_2	47.0268814131051	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTTATGGCTTCCTTT	NA	False	NA	-5	True	AATAAA	-22	NA	26335214	26299447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26301098_26301182_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.17	chr2	-	6527	28	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-577	-5	intron_retention	FALSE	canonical	0	0	junction_20	42.5815444608273	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAATTTATGGCTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	26330344	26299449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
ES.18580.18	chr2	-	5855	30	NNC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	503	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	47.1871322067546	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAATTTATGGCTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	26329264	26299449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26301098_26301182_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
ES.18580.19	chr2	-	4964	23	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	-3874	-5	intron_retention	FALSE	canonical	0	0	junction_6	54.5998213904384	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAATTTATGGCTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	26323398	26299449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306270_26306382_26306440_26306645_26306724_26309632_26309783_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342
ES.18580.2	chr2	-	8809	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	-12	0	-10	0	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335238	26299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.23	chr2	-	8790	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-4	-5	intron_retention	FALSE	canonical	2	9	junction_25	38.9951706411619	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAATTTATGGCTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	26335232	26299449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320258_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.25	chr2	-	5779	30	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	562	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.5633340171564	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAATTTATGGCTTCC	NA	False	NA	-8	True	AATAAA	-19	NA	26329205	26299450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306375_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
ES.18580.26	chr2	-	5547	31	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	91	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_30	40.2706951627221	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAATTTATGGCTTCC	NA	False	NA	-8	True	AATAAA	-19	NA	26329676	26299450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26328831_26329526
ES.18580.27	chr2	-	10758	25	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	11	-7	intron_retention	FALSE	canonical	3	97	junction_2	24.2182997269971	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTAATTTATGGCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	26335201	26299451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26313650_26313894_26314009_26314428_26314570_26315205_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26319136_26319385_26319529_26320088_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.28	chr2	-	8865	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-604	-7	intron_retention	FALSE	canonical	0	0	junction_30	40.4066688665236	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTAATTTATGGCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	26335832	26299451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335615
ES.18580.29	chr2	-	8588	29	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_20	39.7666663815568	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTAATTTATGGCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	26335225	26299451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.3	chr2	-	8072	31	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_29	38.2815447267566	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335257	26299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26328831_26329526_26332083_26335086
ES.18580.30	chr2	-	9736	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	9	-7	intron_retention	FALSE	canonical	0	0	junction_2	47.3007047163852	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTAATTTATGGCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	26335203	26299451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26301098_26302130_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.31	chr2	-	8784	31	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	13	-9	intron_retention	FALSE	canonical	1	3	junction_4	39.2777149142983	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	False	NA	-11	True	AATAAA	-16	NA	26335199	26299453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305293_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.32	chr2	-	8671	11	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	4	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	65.6186711233929	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	False	NA	-11	True	AATAAA	-16	NA	26335208	26299453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26306440_26306645_26307312_26321992_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.33	chr2	-	4222	24	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	32	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	43.5099884236666	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	False	NA	-11	True	AATAAA	-16	NA	26319492	26299453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306270_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385
ES.18580.34	chr2	-	8933	30	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	86	junction_3	26.3185010180726	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	False	NA	-11	True	AATAAA	-16	NA	26335231	26299453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.35	chr2	-	7590	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	-5	1212	-3	76	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTCTTTTTTAGTCA	NA	False	NA	NA	False	AATGAA	-30	NA	26335231	26300654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.36	chr2	-	7530	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	-3	1210	-3	76	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTCTTTTTTAGTCA	NA	False	NA	NA	False	AATGAA	-30	NA	26335231	26300654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.37	chr2	-	7651	32	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	3	76	intron_retention	FALSE	canonical	3	8	junction_2	47.0268814131051	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTCTTTTTTAGTCA	NA	False	NA	NA	False	AATGAA	-30	NA	26335209	26300654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26301098_26301182_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.38	chr2	-	7218	29	NNC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	40	73	intron_retention	FALSE	canonical	0	0	junction_19	50.4777557596474	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAATGTTTCTTTTTTAG	NA	False	NA	NA	False	AATGAA	-27	NA	26335172	26300657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318826_26318966_26319077_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.39	chr2	-	7708	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-649	73	intron_retention	FALSE	canonical	0	0	junction_30	40.4066688665236	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAATGTTTCTTTTTTAG	NA	False	NA	NA	False	AATGAA	-27	NA	26335877	26300657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335611
ES.18580.4	chr2	-	8761	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	39.8856142264629	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335228	26299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306203_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.41	chr2	-	5941	23	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	9	69	intron_retention	TRUE	non_canonical	0	0	junction_21	45.0723018792497	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACAATGTTTCTTTT	NA	False	NA	NA	False	AATGAA	-23	NA	26335203	26300661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318248_26328785_26332083_26335086
ES.18580.44	chr2	-	5355	30	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	-273	31	intron_retention	FALSE	canonical	0	0	junction_7	40.5633340171564	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGATAGAATGAATCTA	NA	False	NA	NA	False	NA	NA	NA	26330040	26300699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306238_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398
ES.18580.45	chr2	-	7542	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	4	28	intron_retention	FALSE	canonical	3	8	junction_2	46.4058066290081	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTGGATAGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	26335208	26300702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26301098_26301182_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.46	chr2	-	6281	19	ISM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	-3	13847	-3	-8901	5prime_fragment	FALSE	canonical	3	144	junction_13	16.9865596833656	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCCTGGTGATGTC	NA	False	NA	NA	False	TATAAA	-15	NA	26335231	26313291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.47	chr2	-	6492	18	NNC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	9	-8901	intron_retention	FALSE	canonical	2	9	junction_12	41.7739840564033	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCCTGGTGATGTC	NA	False	NA	NA	False	TATAAA	-15	NA	26335203	26313291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320258_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.49	chr2	-	5400	9	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	-2	7570	intron_retention	FALSE	canonical	3	144	junction_3	22.7400390281107	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCTGTCTCCATTGATC	NA	False	NA	NA	False	AATAAA	-16	NA	26335214	26318423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.5	chr2	-	7028	17	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	48.701738931993	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335210	26299442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305360_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18580.50	chr2	-	8479	2	NIC	ENSMUSG00000026924.18	novel	8737	30	NA	NA	-2	2246	intron_retention	FALSE	canonical	3	167	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGCAGTAGAAGTTG	NA	False	NA	NA	False	NA	NA	NA	26335230	26323747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26332083_26335086
ES.18580.51	chr2	-	6116	3	ISM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	-3	24329	-3	2220	5prime_fragment	FALSE	canonical	3	167	junction_2	25	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26335231	26323773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26326061_26328398_26332083_26335086
ES.18580.6	chr2	-	8728	31	NNC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	13	0	intron_retention	FALSE	canonical	2	4	junction_27	39.851794884993	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATGGCTTCCTTTGTG	NA	False	NA	-2	True	AATAAA	-25	NA	26335199	26299444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321201_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ES.18581.1	chr2	-	9499	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-7	-4	-5	4	multi-exon	TRUE	canonical	3	26	junction_31	9.72382644510991	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGTTTGGTTCACTT	NA	False	NA	4	True	AATAAA	-38	NA	26393841	26347910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.11	chr2	-	8869	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	163	456	163	-456	multi-exon	FALSE	canonical	3	26	junction_31	9.72382644510991	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGGAACAAGTGTGTC	NA	False	NA	NA	False	AATACA	-29	NA	26393671	26348370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.12	chr2	-	8234	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-30	1284	-28	-1284	multi-exon	FALSE	canonical	3	26	junction_31	9.72382644510991	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTATTTATTGATTG	NA	False	NA	NA	False	NA	NA	NA	26393864	26349198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.13	chr2	-	8362	34	NNC	ENSMUSG00000026923.16	novel	9488	34	NA	NA	-4	-1351	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	12.0149891081538	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGTCAGGGTGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	26393840	26349265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375681_26391892_26391972_26393509
ES.18581.15	chr2	-	8877	33	NNC	ENSMUSG00000026923.16	novel	9488	34	NA	NA	-4	-1357	intron_retention	FALSE	canonical	0	0	junction_10	12.2779893890449	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATTTTCCTGGTCAGG	NA	False	NA	NA	False	AATAAA	-14	NA	26393840	26349271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359972_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.16	chr2	-	3456	19	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	22614	11396	-10710	526	internal_fragment	FALSE	canonical	3	32	junction_18	7.4153660948727	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCTGCTGTGCTATGT	9407	False	NA	NA	False	NA	NA	NA	26371220	26359310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985
ES.18581.17	chr2	-	3640	18	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-3	14477	-1	-1104	5prime_fragment	FALSE	canonical	3	26	junction_15	8.53975032656918	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTCGTGATTTGGGT	NA	False	NA	NA	False	TATAAA	-2	NA	26393837	26362391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.18	chr2	-	1452	7	ISM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-6	22394	-4	-9021	5prime_fragment	FALSE	canonical	3	26	junction_4	9.56991814663706	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATCTGCACCTGCCC	NA	False	NA	NA	False	NA	NA	NA	26393840	26370308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.6	chr2	-	9325	34	NNC	ENSMUSG00000026923.16	novel	9488	34	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.1989928681529	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGTGTGGTTTGGTTC	NA	False	NA	0	True	AATAAA	-34	NA	26393831	26347914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359972_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ES.18581.7	chr2	-	3409	1	NIC	ENSMUSG00000026923.16	novel	9488	34	NA	NA	1432	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGGAGTGTGGTTTG	9566	False	NA	-4	True	AATAAA	-30	NA	26351327	26347918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26347900_26351300
ES.18582.1	chr2	-	361	1	Intergenic	novelGene_15416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATTGTTGGTTTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	26398697	26398336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26398300_26398700
ES.18583.1	chr2	+	179	1	Intergenic	novelGene_15417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTCTC	NA	False	NA	NA	False	NA	NA	NA	26414003	26414182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26414000_26414200
ES.18584.1	chr2	+	1124	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-19	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGGGGGAATGGGGAC	153	False	NA	19	True	AATAAA	-19	NA	26476622	26482700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
ES.18584.10	chr2	+	994	7	NIC	ENSMUSG00000026921.21	novel	541	6	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	164.367896973696	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	252	False	NA	12	True	AATAAA	-12	NA	26476721	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476833_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482429
ES.18584.11	chr2	+	2752	1	FSM	ENSMUSG00000026921.21	ENSMUST00000172683.2	536	1	-435	-1781	266	1343	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCATTTAGAAAGAGCAAT	5254	False	NA	NA	False	NA	NA	NA	26481723	26484475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26481700_26484500
ES.18584.12	chr2	+	4824	1	Antisense	novelGene_ENSMUSG00000026922.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	7906	False	NA	NA	False	NA	NA	NA	26484375	26489199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_26484400_26489200
ES.18584.2	chr2	+	1138	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	158	False	NA	12	True	AATAAA	-12	NA	26476627	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
ES.18584.3	chr2	+	2266	7	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	256	junction_1	52.5060843035251	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	163	False	NA	12	True	AATAAA	-12	NA	26476632	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476694_26479056_26479182_26479341_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ES.18584.4	chr2	+	1137	9	NNC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_1	105.198547399667	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	165	False	NA	12	True	AATAAA	-12	NA	26476634	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26476694_26479089_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ES.18584.5	chr2	+	1180	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	-7	-10	-7	7	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGGAATGGGGACTGC	165	False	NA	22	True	AATAAA	-22	NA	26476634	26482703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ES.18584.6	chr2	+	1042	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	115.898618610915	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	177	False	NA	12	True	AATAAA	-12	NA	26476646	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ES.18584.7	chr2	+	1253	9	NNC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	110.849842128891	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	181	False	NA	12	True	AATAAA	-12	NA	26476650	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481576_26481741_26482129_26482293_26482429
ES.18584.8	chr2	+	1122	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	104.879692982007	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	182	False	NA	12	True	AATAAA	-12	NA	26476651	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482262_26482429
ES.18584.9	chr2	+	1388	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_1	119.928379987935	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	223	False	NA	12	True	AATAAA	-12	NA	26476692	26482693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26476833_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129
ES.18585.1	chr2	-	3613	6	FSM	ENSMUSG00000026922.14_ENSMUSG00000105799.3	ENSMUST00000028286.12	1489	6	52	-2176	52	482	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTAGTGTCTACAGGA	9533	False	NA	NA	False	AAGAAA	-9	NA	26494292	26480892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ES.18585.2	chr2	-	1569	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	-81	1	4	-1	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTAGAGTTCTTTCTC	9400	False	NA	0	True	TATAAA	-44	NA	26494425	26483069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ES.18585.3	chr2	-	1218	6	NIC	ENSMUSG00000026922.14	novel	1273	6	NA	NA	-1	-23	combination_of_known_junctions	FALSE	canonical	3	216	junction_5	206.37577377202	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGAGGTCTCTTTCAG	9937	False	NA	-22	True	TATAAA	-22	NA	26493729	26483091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26493673
ES.18585.4	chr2	-	1411	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	-162	24	-41	-24	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGAGGTCTCTTTCA	9440	False	NA	-23	True	TATAAA	-21	NA	26494385	26483092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
ES.18585.6	chr2	-	1093	6	NNC	ENSMUSG00000026922.14	novel	1145	5	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	361.52897532563	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACATTGCATCATTTCAT	9554	False	NA	NA	False	NA	NA	NA	26494271	26484513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26484865_26485860_26485966_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ES.18585.7	chr2	-	945	5	FSM	ENSMUSG00000026922.14	ENSMUST00000140386.8	1145	5	199	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_4	320.696897396903	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACATTGCATCATTTC	9595	False	NA	NA	False	NA	NA	NA	26494230	26484515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ES.18586.1	chr2	+	1839	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	-220	3	-220	-3	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGGGTATGTGGATCC	2215	False	NA	14	True	AATAAA	-14	NA	26518248	26526506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
ES.18586.2	chr2	+	4141	2	FSM	ENSMUSG00000036186.6	ENSMUST00000153849.2	610	2	-46	-3485	-9	-5	multi-exon	FALSE	canonical	3	52	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCGGGTATGTGGAT	2426	False	NA	12	True	AATAAA	-12	NA	26518459	26526504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26518712_26522615
ES.18586.3	chr2	+	1960	4	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	34	3	-3	-3	intron_retention	FALSE	canonical	3	52	junction_1	8.9566858950296	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGGGTATGTGGATCC	2469	False	NA	14	True	AATAAA	-14	NA	26518502	26526506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998
ES.18586.4	chr2	+	1410	5	NNC	ENSMUSG00000036186.6	novel	1622	5	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.4232378788066	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGGTATGTGGATCCTT	2490	False	NA	16	True	AATAAA	-16	NA	26518523	26526508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525706
ES.18587.1	chr2	-	746	4	Intergenic	novelGene_15418	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATCTTTCTTTGCTGTC	NA	False	NA	-3	True	AATAAA	-19	NA	26530257	26527184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
ES.18587.2	chr2	-	3017	2	Genic_Genomic	ENSMUSG00000097052.4_ENSMUSG00000077192.5	novel	139	1	NA	NA	-925	670	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAATCTTTCTTTGC	NA	False	NA	-7	True	AATAAA	-15	NA	26530258	26527188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_26529522_26529574
ES.18587.3	chr2	-	1291	4	Intergenic	novelGene_15419	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	25.7725090401036	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAATCTTTCTTTGC	NA	False	NA	-7	True	AATAAA	-15	NA	26530256	26527188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26527646_26528052_26528108_26529424_26529522_26529574
ES.18587.4	chr2	-	2661	2	Genic_Genomic	ENSMUSG00000077192.5	novel	132	1	NA	NA	-923	2013	multi-exon	FALSE	canonical	3	60	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAATCTTTCTTTGC	NA	False	NA	-7	True	AATAAA	-15	NA	26530256	26527188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_26527646_26528052
ES.18587.6	chr2	-	1079	2	Intergenic	novelGene_15420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGGAATCTTTCTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	26530064	26527189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26527646_26529441
ES.18587.7	chr2	-	1144	3	Genic_Genomic	ENSMUSG00000097052.4	novel	139	1	NA	NA	-2259	666	multi-exon	FALSE	canonical	3	46	junction_2	0.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGCTGGAATCTTTCT	NA	False	NA	-11	True	AATAAA	-11	NA	26530256	26527192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_26528108_26529441_26529484_26530069
ES.18587.8	chr2	-	535	1	Intergenic	novelGene_15421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26530175	26529640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26529600_26530200
ES.18588.1	chr2	+	2002	3	FSM	ENSMUSG00000086775.8	ENSMUST00000131841.8	3947	3	1943	2	-1000	-2	multi-exon	FALSE	canonical	0	0	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACCTGTGTCTCTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	26532326	26535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26533780_26533860_26533969_26535513
ES.18588.2	chr2	+	5069	7	NNC	ENSMUSG00000086775.8	novel	3947	3	NA	NA	200	6157	intron_retention	FALSE	canonical	0	0	junction_1	1.52752523165195	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGTGTCACATAACAG	NA	False	NA	NA	False	AATAAA	-20	NA	26533526	26542113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26533589_26533708_26533780_26533860_26533969_26535513_26539935_26540014_26540123_26541722_26541825_26541916
ES.18588.3	chr2	+	2192	3	NNC	ENSMUSG00000086775.8	novel	3947	3	NA	NA	235	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACCTGTGTCTCTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	26533561	26535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26533589_26533708_26533780_26533860
ES.18589.1	chr2	-	176	1	Intergenic	novelGene_15422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	26543680	26543504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26543500_26543700
ES.1859.1	chr1	-	1330	6	NNC	ENSMUSG00000026659.14	novel	911	6	NA	NA	5	197	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	133.397751105482	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGGATACTTCTTGGTT	NA	False	NA	0	True	TTTAAA	-9	NA	170712959	170701559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170702140_170707228_170707312_170707698_170707796_170708141_170708261_170708483_170708611_170712635
ES.1859.10	chr1	-	5105	4	ISM	ENSMUSG00000026659.14	ENSMUST00000171447.8	846	5	-222	1	-14	0	intron_retention	FALSE	canonical	3	10	junction_1	139.859453261718	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTGTGTTAGATGGTT	NA	False	NA	-3	True	ATTAAA	-15	NA	170712990	170701757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_170702140_170707698_170707796_170708141_170708261_170708483
ES.1859.11	chr1	-	1053	6	NIC	ENSMUSG00000026659.14	novel	911	6	NA	NA	-45	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	130.413802950455	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCCTGTGTTAGATGGT	NA	False	NA	-4	True	ATTAAA	-14	NA	170712618	170701758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712476
ES.1859.12	chr1	-	3997	1	NIC	ENSMUSG00000026659.14	novel	1875	5	NA	NA	6817	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCCTGTGTTAGATGG	NA	False	NA	-5	True	ATTAAA	-13	NA	170705756	170701759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170701800_170705800
ES.1859.13	chr1	-	1628	5	ISM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-26	4398	-15	1752	5prime_fragment	FALSE	canonical	3	124	junction_4	81.3910314469598	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCCAAAATCAATCAATC	NA	False	NA	NA	False	NA	NA	NA	170712991	170706486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
ES.1859.14	chr1	-	6292	2	ISM	ENSMUSG00000026659.14	ENSMUST00000172042.2	233	3	-429	-1751	24	1751	intron_retention	FALSE	canonical	3	351	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCCCAAAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	170713002	170706487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_170708261_170708483
ES.1859.15	chr1	-	1761	4	NIC	ENSMUSG00000026659.14	novel	911	6	NA	NA	12	1579	intron_retention	FALSE	canonical	3	124	junction_3	93.6411590416664	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGAGGCATGCACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	170713014	170706659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170707796_170708141_170708261_170708483_170708611_170712635
ES.1859.16	chr1	-	1604	1	NIC	ENSMUSG00000026659.14	novel	1875	5	NA	NA	8	-3176	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAATAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	170713018	170711414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170711400_170713000
ES.1859.2	chr1	-	1456	6	FSM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-23	-522	-12	190	multi-exon	FALSE	canonical	3	124	junction_5	89.0002247188174	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTATCCAGGATACTT	NA	False	NA	-7	True	TTTAAA	-2	NA	170712988	170701566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
ES.1859.3	chr1	-	1284	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	91	-1	8	1	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGTTAGATGGTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	170713018	170701755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ES.1859.4	chr1	-	1310	6	FSM	ENSMUSG00000026659.14	ENSMUST00000166393.2	911	6	-66	-333	-5	1	multi-exon	FALSE	canonical	3	124	junction_5	89.0002247188174	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGTTAGATGGTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	170713031	170701755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708611_170712635
ES.1859.6	chr1	-	5287	5	ISM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	126	-1	-7	1	intron_retention	FALSE	canonical	3	209	junction_3	65.7533269120278	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGTTAGATGGTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	170712983	170701755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483
ES.1859.7	chr1	-	1307	6	NNC	ENSMUSG00000026659.14	novel	1374	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	129.252311391325	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTGTGTTAGATGGTT	NA	False	NA	-3	True	ATTAAA	-15	NA	170713031	170701757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170702140_170707228_170707416_170707686_170707796_170708141_170708261_170708483_170708598_170712635
ES.1859.8	chr1	-	1088	5	FSM	ENSMUSG00000026659.14	ENSMUST00000171447.8	846	5	-243	1	15	0	multi-exon	FALSE	canonical	3	10	junction_1	122.748727080976	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTGTGTTAGATGGTT	NA	False	NA	-3	True	ATTAAA	-15	NA	170713011	170701757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170702140_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ES.18590.1	chr2	-	3566	1	Intergenic	novelGene_15423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAATAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	26720862	26717296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26717300_26720900
ES.18591.1	chr2	-	5122	7	NNC	ENSMUSG00000015787.16	novel	1811	6	NA	NA	65	3245	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1.7950549357115	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTTGGGTGTATCCA	NA	False	NA	NA	False	NA	NA	NA	26746745	26729269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26733887_26735967_26736103_26736585_26736622_26738262_26738320_26738932_26739003_26746433_26746565_26746669
ES.18591.2	chr2	-	175	1	Intergenic	novelGene_15424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	26744148	26743973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26744000_26744100
ES.18592.1	chr2	+	152	1	Intergenic	novelGene_15425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGCTAA	NA	False	NA	NA	False	NA	NA	NA	26755690	26755842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26755700_26755800
ES.18593.1	chr2	+	174	1	Intergenic	novelGene_15426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAATTCCTACAGAAA	NA	False	NA	NA	False	NA	NA	NA	26756720	26756894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_26756700_26756900
ES.18594.1	chr2	+	8779	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-7691	-1	intron_retention	FALSE	canonical	3	4686	junction_6	264.743114483959	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTATTTGGG	NA	False	NA	5	True	AATATA	-18	NA	26793084	26803329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.10	chr2	+	1083	7	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-10	-13	intron_retention	FALSE	canonical	3	2861	junction_1	857.871914811426	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800818	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802814_26802999_26803070_26803176
ES.18594.11	chr2	+	1047	7	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	286	junction_4	1798.38675391771	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800821	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802665_26802814_26802999_26803070_26803176
ES.18594.12	chr2	+	1073	7	NNC	ENSMUSG00000062647.17	novel	920	7	NA	NA	-7	-13	intron_retention	FALSE	canonical	0	0	junction_3	1890.07192690884	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800821	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26801139_26801433_26801584_26802030_26802172_26802334_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.13	chr2	+	1472	5	NIC	ENSMUSG00000062647.17	novel	1043	7	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	2861	junction_1	913.21164031127	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800821	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26803070_26803176
ES.18594.15	chr2	+	1733	5	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	2861	junction_1	1020.27456476186	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800821	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26800843_26801017_26801139_26801433_26802814_26802999_26803070_26803176
ES.18594.16	chr2	+	1025	7	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	429	junction_1	1720.39020929039	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800821	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26801139_26801438_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.17	chr2	+	1730	3	NIC	ENSMUSG00000062647.17	novel	1043	7	NA	NA	16	-13	intron_retention	FALSE	canonical	3	4686	junction_2	130	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26801033	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26801584_26802030_26803070_26803176
ES.18594.18	chr2	+	872	6	ISM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	499	13	257	-13	3prime_fragment	FALSE	canonical	3	4686	junction_5	281.239115344932	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26801274	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.19	chr2	+	1821	2	FSM	ENSMUSG00000064829.5_ENSMUSG00000062647.17	ENSMUST00000147143.2	593	2	-1241	13	372	-13	multi-exon	FALSE	canonical	3	4686	junction_1	0	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26801389	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26803070_26803176
ES.18594.2	chr2	+	994	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	-81	1	-81	-1	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTTGGTTATTTGGG	NA	False	NA	5	True	AATATA	-18	NA	26800694	26803329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.20	chr2	+	567	4	ISM	ENSMUSG00000062647.17	ENSMUST00000143678.8	920	7	1215	13	29	-13	3prime_fragment	FALSE	canonical	3	4686	junction_3	361.491662728509	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26802232	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.3	chr2	+	2152	3	NIC	ENSMUSG00000062647.17	novel	1043	7	NA	NA	-10	-13	intron_retention	FALSE	canonical	3	2861	junction_1	971.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800765	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26800843_26801017_26802458_26802682
ES.18594.5	chr2	+	857	8	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1810.13123889977	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800817	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802176_26802383_26802458_26802682_26802814_26802999_26803070_26803176
ES.18594.6	chr2	+	1531	6	NIC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-13	intron_retention	FALSE	canonical	3	2861	junction_1	931.907377371807	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800817	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26800843_26801017_26801139_26801433_26802172_26802377_26802814_26802999_26803070_26803176
ES.18594.7	chr2	+	876	8	NNC	ENSMUSG00000062647.17	novel	914	8	NA	NA	-11	-13	at_least_one_novel_splicesite	FALSE	canonical	3	286	junction_5	1736.40151004358	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800817	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802665_26802814_26802999_26803070_26803176
ES.18594.8	chr2	+	2500	1	FSM	ENSMUSG00000065258.3	ENSMUST00000083324.3	74	1	-455	-1971	-455	1971	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTGACTGCCTT	NA	False	NA	-7	True	AATATA	-6	NA	26800817	26803317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26800800_26803300
ES.18595.1	chr2	-	3638	5	NIC	ENSMUSG00000036160.14	novel	2971	5	NA	NA	4	1364	intron_retention	FALSE	canonical	0	0	junction_1	132.360303716787	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCCCGTGTCTGATCCT	NA	False	NA	NA	False	TTTAAA	-26	NA	26792858	26777275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26779391_26782002_26783080_26789348_26789438_26789740_26789945_26792705
ES.18595.2	chr2	-	2444	4	NIC	ENSMUSG00000036160.14	novel	680	3	NA	NA	-24	1279	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.7097493069	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTTCTTTCAATTTT	NA	False	NA	NA	False	TATAAA	-17	NA	26792826	26777360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26779391_26789348_26789438_26789740_26789945_26792705
ES.18595.3	chr2	-	1205	4	NIC	ENSMUSG00000036160.14	novel	2971	5	NA	NA	9	-217	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	141.386782346237	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTGTTTTTCTATCA	NA	False	NA	NA	False	CATAAA	-15	NA	26789428	26779217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26779391_26781986_26782738_26782878_26783080_26789348
ES.18595.4	chr2	-	3952	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	12	-993	12	-453	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGGTCCCTTTGTTCTT	NA	False	NA	NA	False	AAAAAG	-41	NA	26792879	26779453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ES.18595.5	chr2	-	2954	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	29	-12	0	12	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTCTGTGTGTTGGT	NA	False	NA	NA	False	TTTAAA	-15	NA	26792862	26780434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ES.18595.6	chr2	-	2834	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	-196	333	-196	4	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCGTATTTGTTTG	NA	False	NA	-2	True	NA	NA	NA	26793087	26780779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ES.18595.7	chr2	-	3493	2	ISM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	8474	337	-1794	0	3prime_fragment	FALSE	canonical	3	256	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26784417	26780783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26782738_26782878
ES.18595.8	chr2	-	8341	1	NIC	ENSMUSG00000036160.14	novel	680	3	NA	NA	312	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGTGTTCGTATTT	NA	False	NA	-7	True	NA	NA	NA	26789125	26780784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26780800_26789100
ES.18596.1	chr2	-	3578	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	-62	-10	-62	10	multi-exon	FALSE	canonical	3	168	junction_1	2.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGATTAGTCCAAGA	NA	False	NA	6	True	AATAAA	-28	NA	26800751	26795263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26798314_26799004_26799086_26800304
ES.18596.2	chr2	-	3602	3	FSM	ENSMUSG00000015776.13	ENSMUST00000139815.2	668	3	-87	-2847	12	0	multi-exon	FALSE	canonical	0	0	junction_1	86.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	False	NA	-4	True	AATAAA	-18	NA	26800677	26795273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26798422_26799004_26799086_26800304
ES.18596.3	chr2	-	1459	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	-163	-323	-55	-3	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTGTCTGTCTTTCTT	NA	False	NA	-7	True	AATAAA	-15	NA	26800744	26795276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
ES.18596.5	chr2	-	4155	2	NIC	ENSMUSG00000015776.13	novel	3506	3	NA	NA	37	-5	intron_retention	FALSE	canonical	3	173	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	26800652	26795278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26799086_26800304
ES.18597.1	chr2	+	2921	4	ISM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	-19	-15	-5	4	intron_retention	TRUE	canonical	3	305	junction_3	11.1455023315337	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATCATTGTTTTCT	NA	False	NA	41	True	CATAAA	-36	NA	26806373	26810199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203
ES.18597.11	chr2	+	2867	3	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	4	4	intron_retention	FALSE	canonical	3	245	junction_2	43.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATCATTGTTTTCT	NA	False	NA	41	True	CATAAA	-36	NA	26806396	26810199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806872_26807439_26809371_26809738
ES.18597.12	chr2	+	2508	5	FSM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	11	0	11	0	multi-exon	FALSE	canonical	3	245	junction_4	33.741665637606	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806403	26810184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809738
ES.18597.13	chr2	+	1165	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	119.474516111177	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACTTTTGCCAAACCA	NA	False	NA	20	True	CATAAA	-44	NA	26806407	26810178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808876_26809068_26809203_26809371_26809738
ES.18597.14	chr2	+	1112	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	23	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	115.994827470883	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTATCATTGTTTT	NA	False	NA	39	True	CATAAA	-34	NA	26806415	26810197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26809738
ES.18597.15	chr2	+	798	6	NNC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	29	682	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	151.079581678002	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGTAAGGCATCACAA	NA	False	NA	NA	False	AATACA	-12	NA	26806421	26810877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26810726
ES.18597.16	chr2	+	2828	4	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	29	2	intron_retention	FALSE	canonical	3	27	junction_3	137.855802279854	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTATCATTGTTTT	NA	False	NA	39	True	CATAAA	-34	NA	26806421	26810197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806872_26807439_26809068_26809203_26809371_26809614
ES.18597.18	chr2	+	1191	6	NNC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.124775931318	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTTGCCAAACCAAT	NA	False	NA	22	True	CATAAA	-17	NA	26806427	26810180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808832_26809068_26809203_26809371_26809738
ES.18597.2	chr2	+	1330	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	113.91821627817	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTATCATTGTTTT	NA	False	NA	39	True	CATAAA	-34	NA	26806377	26810197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809614
ES.18597.3	chr2	+	1207	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	-1	-3	-1	3	multi-exon	FALSE	canonical	3	245	junction_5	33.4388995034227	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTATCATTGTTTTC	NA	False	NA	40	True	CATAAA	-35	NA	26806377	26810198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ES.18597.4	chr2	+	2647	5	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	27	junction_4	127.095436582121	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACTTTTGCCAAACCA	NA	False	NA	20	True	CATAAA	-44	NA	26806382	26810178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809614
ES.18597.5	chr2	+	1213	6	NNC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	117.480211099572	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATATGTGTATCATT	NA	False	NA	34	True	CATAAA	-29	NA	26806391	26810192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26806542_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ES.18597.6	chr2	+	2724	4	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	3	-4	intron_retention	FALSE	canonical	3	245	junction_3	36.3593179253957	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCAATATGTGTATCAT	NA	False	NA	33	True	CATAAA	-28	NA	26806395	26810191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806872_26807439_26809068_26809203_26809371_26809738
ES.18597.7	chr2	+	1182	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	121.766005108158	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGTATCATTGTTTT	NA	False	NA	39	True	CATAAA	-34	NA	26806395	26810197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809744
ES.18597.8	chr2	+	2641	4	NIC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	4	2	intron_retention	FALSE	canonical	1	7	junction_3	150.904679258869	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTTGCCAAACCAAT	NA	False	NA	22	True	CATAAA	-17	NA	26806396	26810180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26806516_26806716_26806872_26807439_26809371_26809744
ES.18597.9	chr2	+	2671	4	NNC	ENSMUSG00000014873.16	novel	2519	5	NA	NA	4	0	intron_retention	FALSE	canonical	2	3	junction_1	139.193709947285	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACTTTTGCCAAACCA	NA	False	NA	20	True	CATAAA	-44	NA	26806396	26810178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26806542_26806716_26806872_26807439_26809371_26809738
ES.18598.1	chr2	-	1668	7	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-3	4	intron_retention	FALSE	canonical	3	337	junction_5	27.1011479871651	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGAAACCGTTTTA	NA	False	NA	1	True	AATAAA	-25	NA	26806347	26803388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804908_26805443_26805527_26805607_26806019_26806268
ES.18598.10	chr2	-	1101	9	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	108.788498932562	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806511	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804224_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.11	chr2	-	987	9	NNC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	146.580822415485	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806350	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26803518_26803588_26803662_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805762_26805966_26806019_26806268
ES.18598.12	chr2	-	1035	7	FSM	ENSMUSG00000015790.17	ENSMUST00000147110.8	853	7	7	-189	-6	-5	multi-exon	FALSE	canonical	3	5	junction_6	135.198208403645	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806350	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26806268
ES.18598.13	chr2	-	1031	9	FSM	ENSMUSG00000015790.17	ENSMUST00000167661.7	1151	9	115	5	-8	-5	multi-exon	FALSE	canonical	3	32	junction_7	110.059571937201	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806365	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ES.18598.14	chr2	-	1053	9	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	142.85482140971	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806355	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803703_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ES.18598.15	chr2	-	1013	8	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	5	-5	intron_retention	FALSE	canonical	3	36	junction_3	115.47347075835	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806352	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26803671_26803924_26804088_26804186_26804224_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.16	chr2	-	1448	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	329	junction_6	27.3585415532036	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806363	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.17	chr2	-	853	8	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	162.810519642075	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806361	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26805443_26805527_26805607_26805797_26805966_26806019_26806268
ES.18598.18	chr2	-	986	8	NNC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.970003457648	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCATGGCTCAGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	26806350	26803400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804283_26804718_26804908_26805443_26805527_26805607_26805782_26806268
ES.18598.19	chr2	-	806	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	125.628542187852	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCATGGCTCAGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	26806370	26803400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.2	chr2	-	1552	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	-374	-5	-374	3	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTGAAACCGTTTT	NA	False	NA	0	True	AATAAA	-24	NA	26806916	26803389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.20	chr2	-	1815	6	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	32	junction_4	126.808517064115	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCATGGCTCAGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	26806366	26803400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26804088_26804186_26804908_26805443_26805527_26805607_26805782_26805966_26806019_26806268
ES.18598.21	chr2	-	1983	5	NIC	ENSMUSG00000015790.17	novel	860	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	337	junction_3	9.8836987003854	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACCATGGCTCAGTC	NA	False	NA	-12	True	AATAAA	-12	NA	26806350	26803401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26804088_26804186_26804908_26805443_26805527_26805607_26806019_26806268
ES.18598.3	chr2	-	1064	8	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	328	junction_3	29.0460577254084	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTCAGTCTGAAACCGT	NA	False	NA	-3	True	AATAAA	-21	NA	26806360	26803392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18598.4	chr2	-	3123	1	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	25	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806517	26803394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803400_26806500
ES.18598.5	chr2	-	1032	9	NIC	ENSMUSG00000015790.17	novel	1151	9	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	119.405820628644	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGCTCAGTCTGA	NA	False	NA	-9	True	AATAAA	-15	NA	26806350	26803398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805797_26805966_26806019_26806268
ES.18598.6	chr2	-	1210	9	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	115.533544912289	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806564	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805762_26805966_26806019_26806268
ES.18598.7	chr2	-	2714	4	NIC	ENSMUSG00000015790.17	novel	853	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	337	junction_3	35.3490531069158	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806547	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26803671_26803924_26804088_26804186_26805527_26805607
ES.18598.9	chr2	-	840	8	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	122.917925163625	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATGGCTCAGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	26806361	26803399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26803518_26803588_26803671_26803924_26804014_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ES.18599.1	chr2	-	5243	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	477	-2439	-68	2439	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTTTCTGGCTTTTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	26823463	26807612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.18599.10	chr2	-	813	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	505	1963	-40	-41	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTCCAGACCATGTCA	NA	False	NA	NA	False	TATAAA	-26	NA	26823435	26812014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.18599.2	chr2	-	2930	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	352	-1	-193	1	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGTGGTCCTATATGGT	NA	False	NA	-1	True	AATAAA	-19	NA	26823588	26810050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.18599.5	chr2	-	2055	2	NNC	ENSMUSG00000014867.10	novel	737	5	NA	NA	11231	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATAGTGTGGTCCTAT	NA	False	NA	-6	True	AATAAA	-14	NA	26812164	26810055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26811159_26811212
ES.18599.6	chr2	-	2138	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	357	786	-188	-786	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGTTTCTCTTTTTGG	NA	False	NA	-1	True	TTTAAA	-20	NA	26823583	26810837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.18599.7	chr2	-	2026	7	NNC	ENSMUSG00000014867.10	novel	3281	6	NA	NA	-119	-789	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	309.066695427091	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACACCGTGTTTCTCTTTT	NA	False	NA	-4	True	TTTAAA	-17	NA	26823514	26810840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26811112_26811151_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.18599.8	chr2	-	3753	7	NNC	ENSMUSG00000014867.10	novel	3281	6	NA	NA	-35	-789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	393.516376900491	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACACCGTGTTTCTCTTTT	NA	False	NA	-4	True	TTTAAA	-17	NA	26823430	26810840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26820568_26822340_26823286
ES.18599.9	chr2	-	1141	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	457	1683	-88	239	multi-exon	FALSE	canonical	3	778	junction_1	38.262252939418	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTTGACTGTCCAGG	NA	False	NA	0	True	GATAAA	-17	NA	26823483	26811734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ES.186.1	chr1	-	3819	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	23825272	23821453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_23821500_23825300
ES.1860.1	chr1	+	323	1	FSM	ENSMUSG00000096968.2	ENSMUST00000180542.2	817	1	497	-3	497	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGTATTACTCAGCCAT	3331	False	NA	NA	False	NA	NA	NA	170713130	170713453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_170713100_170713500
ES.18600.1	chr2	-	2476	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	-193	-2	-193	2	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGGAAGTTCATGT	NA	False	NA	-4	True	AATAAA	-16	NA	26854591	26843572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ES.18600.11	chr2	-	4136	6	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	43	junction_3	64.7314452179155	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854335	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26848580_26850614_26850753_26852394_26852736_26854063
ES.18600.12	chr2	-	2474	8	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	69.8298222941506	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGAGTGTGTGGAAG	NA	False	NA	-11	True	AATAAA	-9	NA	26854335	26843579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852997_26854063
ES.18600.14	chr2	-	2899	7	NNC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.5808870363431	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATGGAGTGTGTGGAA	NA	False	NA	-12	True	AATAAA	-8	NA	26854341	26843580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_26844609_26845506_26845582_26846300_26846376_26847615_26848580_26850614_26850753_26852394_26852736_26854063
ES.18600.15	chr2	-	918	3	NIC	ENSMUSG00000052406.15	novel	1121	7	NA	NA	1862	214	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	91	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGTTTTGCCTACCCT	NA	False	NA	NA	False	NA	NA	NA	26852428	26847833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26848580_26850614_26850753_26852394
ES.18600.16	chr2	-	3031	4	ISM	ENSMUSG00000052406.15	ENSMUST00000136710.2	1121	7	-57	3282	-12	213	intron_retention	FALSE	canonical	3	152	junction_2	31.4783876475414	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGTTTTGCCTACCC	NA	False	NA	NA	False	NA	NA	NA	26854348	26847834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26848580_26850235_26850430_26850614_26850753_26852394
ES.18600.2	chr2	-	3585	7	ISM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	26	-2	26	2	intron_retention	FALSE	canonical	3	152	junction_5	25.8182751812226	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGGAAGTTCATGT	NA	False	NA	-4	True	AATAAA	-16	NA	26854372	26843572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394
ES.18600.3	chr2	-	4249	5	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	43	junction_3	70.1177580930822	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26854334	26843574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394
ES.18600.4	chr2	-	3388	6	NIC	ENSMUSG00000052406.15	novel	2281	8	NA	NA	27	0	intron_retention	FALSE	canonical	3	43	junction_4	64.1728914729576	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26854371	26843574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394
ES.18600.5	chr2	-	2043	7	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	59.1629106789042	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854357	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394_26852736_26854063
ES.18600.6	chr2	-	1906	6	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	80.8618575102007	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854309	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26850614_26850753_26852394_26852736_26854063
ES.18600.7	chr2	-	8174	4	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	-20	0	intron_retention	FALSE	canonical	3	152	junction_3	25.6645020732269	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854311	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26845582_26846300_26848580_26850235_26850430_26850614
ES.18600.8	chr2	-	2116	7	FSM	ENSMUSG00000052406.15	ENSMUST00000136710.2	1121	7	-20	-975	-20	0	multi-exon	FALSE	canonical	1	3	junction_2	74.3611681816076	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854311	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_26844609_26845506_26845582_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ES.18600.9	chr2	-	1451	4	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	92.4854342886249	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854333	26843577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26854063
ES.18601.1	chr2	-	177	1	Intergenic	novelGene_15427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTGGTTC	5903	False	NA	NA	False	NA	NA	NA	26859051	26858874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26858900_26859100
ES.18602.1	chr2	+	1176	4	FSM	ENSMUSG00000015488.15	ENSMUST00000114005.9	1286	4	7	103	7	-103	multi-exon	FALSE	canonical	0	0	junction_3	42.9262934186807	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGCTTTCTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	26899944	26906758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26905954
ES.18602.2	chr2	+	1600	6	FSM	ENSMUSG00000015488.15	ENSMUST00000114006.8	1648	6	48	0	-39	0	multi-exon	FALSE	canonical	1	1	junction_5	34.2718543414272	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTCTGCCTGTCAC	NA	False	NA	41	True	AGTAAA	-18	NA	26899985	26911101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899_26908992_26910032
ES.18602.3	chr2	+	1876	2	NNC	ENSMUSG00000015488.15	novel	2689	5	NA	NA	3591	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTGCCTGTCACCTG	6107	False	NA	44	True	AGTAAA	-21	NA	26909185	26911104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_26909631_26909673
ES.18602.4	chr2	+	720	1	NIC	ENSMUSG00000015488.15	novel	1648	6	NA	NA	4376	380	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCCCACCTGCTCCT	6892	False	NA	NA	False	NA	NA	NA	26909970	26910690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_26910000_26910700
ES.18603.1	chr2	-	174	1	Intergenic	novelGene_15428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTGTTGTTTTTAAC	7640	False	NA	NA	False	NA	NA	NA	26925795	26925621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_26925600_26925800
ES.18604.1	chr2	-	3140	17	ISM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	7579	2	-6990	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0.3903123748999	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGTGGGGTACAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	27129699	27078406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_27079657_27081890_27082027_27086660_27086830_27087540_27087704_27101022_27101117_27105049_27105198_27108809_27108924_27110654_27110794_27114980_27115095_27117088_27117173_27118255_27118398_27120449_27120541_27120782_27120870_27124302_27124433_27125489_27125595_27129378_27129480_27129626
ES.18605.1	chr2	+	228	1	Intergenic	novelGene_15429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTAAACCAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	27255719	27255947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27255700_27255900
ES.18606.1	chr2	+	153	2	Genic_Genomic	ENSMUSG00002075812.1	novel	100	1	NA	NA	48	150	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27291911	27292113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_27292031_27292079
ES.18607.1	chr2	+	4905	1	Intergenic	novelGene_15430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAAAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	27310112	27315017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27310100_27315000
ES.18608.1	chr2	-	5135	28	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	20.3791900098982	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTAGCCTTCTGTGTC	NA	False	NA	0	True	AATAAA	-21	NA	27317036	27152113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158162_27158250_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287_27316463_27316542
ES.18608.12	chr2	-	7377	26	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	323	-3	intron_retention	FALSE	canonical	2	2	junction_3	14.0247780731105	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27316601	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159032_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.13	chr2	-	4071	10	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-1515	-3	combination_of_known_splicesites	FALSE	canonical	3	54	junction_3	5.93379107680831	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27170406	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202
ES.18608.14	chr2	-	4648	25	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	358	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.5198618756822	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27316566	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167387_27171908_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.15	chr2	-	4966	27	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	24	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.5531440895571	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27317021	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157312_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287_27316461_27316531
ES.18608.16	chr2	-	8179	25	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-29	-3	intron_retention	FALSE	canonical	0	0	junction_8	14.5198618756822	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27317074	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.17	chr2	-	5088	25	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.468947854354	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27317041	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173466_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.18	chr2	-	4558	26	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	15162	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.4310068556007	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTGGTTAGCCTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	27301762	27152118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27301578
ES.18608.2	chr2	-	5171	26	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.2438197124226	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTAGCCTTCTGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	27317080	27152114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.20	chr2	-	10202	24	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	18	-393	intron_retention	FALSE	canonical	3	35	junction_20	9.93228491103005	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATATTTTAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	27317027	27152508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27172002_27172300_27172403_27173320_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.21	chr2	-	3170	26	NNC	ENSMUSG00000009621.19	novel	848	7	NA	NA	580	2722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4330261285871	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATATTTTCTTTTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	27316344	27155744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27156589_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.22	chr2	-	4555	25	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-31	2722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.5198618756822	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATATTTTCTTTTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	27317076	27155744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.23	chr2	-	2879	23	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	292	-3	intron_retention	FALSE	canonical	0	0	junction_6	15.0360448465712	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATACCTGGCCCCGTATTT	NA	False	NA	NA	False	NA	NA	NA	27316632	27159595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.24	chr2	-	3322	22	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-41	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	15.3627343087803	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACCATACCTGGCCCCG	NA	False	NA	NA	False	NA	NA	NA	27317086	27159600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27171878_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.3	chr2	-	5124	25	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.5198618756822	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	-2	True	AATAAA	-19	NA	27317041	27152115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167358_27171881_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.4	chr2	-	5289	27	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-68	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.6363518282805	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	False	NA	-3	True	AATAAA	-18	NA	27317113	27152116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158162_27158250_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.5	chr2	-	5217	29	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	22.4411929909518	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	False	NA	-3	True	AATAAA	-18	NA	27317017	27152116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159032_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168695_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27183001_27183125_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287_27316467_27316538
ES.18608.6	chr2	-	8405	25	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	35	junction_21	9.79574383200287	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	False	NA	-3	True	AATAAA	-18	NA	27317052	27152116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.8	chr2	-	4680	27	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	332	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_23	9.47466256756571	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	False	NA	-3	True	AATAAA	-18	NA	27316592	27152116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ES.18608.9	chr2	-	5059	27	NNC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.1288624547599	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	False	NA	-3	True	AATAAA	-18	NA	27317042	27152116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171894_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287_27316467_27316538
ES.18609.1	chr2	+	174	1	Intergenic	novelGene_15431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAGCTGAGGCA	NA	False	NA	NA	False	NA	NA	NA	27327236	27327410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27327200_27327400
ES.1861.1	chr1	-	178	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	4463	False	NA	NA	False	NA	NA	NA	170757376	170757198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_170757200_170757400
ES.18610.1	chr2	+	1787	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	113	-2	-66	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTCATTTTTCTTGT	NA	False	NA	5	True	AATAAA	-17	NA	27332448	27334235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27332400_27334200
ES.18610.2	chr2	+	1653	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332483	27334233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27332827_27332923
ES.18610.3	chr2	+	1301	3	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332533	27334233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27332827_27332939_27333370_27333655
ES.18610.4	chr2	+	1564	2	NNC	ENSMUSG00000109946.2	novel	509	2	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332556	27334233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27332827_27332939
ES.18611.1	chr2	+	164	1	Intergenic	novelGene_15432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	27355046	27355210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27355000_27355200
ES.18612.1	chr2	+	126	1	Intergenic	novelGene_15434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	27375717	27375843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27375700_27375800
ES.18613.1	chr2	+	136	1	Intergenic	novelGene_15435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCAATAGC	NA	False	NA	NA	False	NA	NA	NA	27376127	27376263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27376100_27376300
ES.18614.1	chr2	+	200	1	Intergenic	novelGene_15437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAAATCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	27379737	27379937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27379700_27379900
ES.18615.1	chr2	+	2408	2	Antisense	novelGene_ENSMUSG00000026918.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTGGTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	27395759	27398835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_27395814_27396481
ES.18615.2	chr2	+	3081	1	Antisense	novelGene_ENSMUSG00000026918.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTTCAGCTCACTTT	NA	False	NA	NA	False	NA	NA	NA	27395760	27398841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_27395800_27398800
ES.18615.3	chr2	+	2648	2	Antisense	novelGene_ENSMUSG00000026918.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGGTCCCCGAGTG	NA	False	NA	NA	False	NA	NA	NA	27395810	27398995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_27395945_27396481
ES.18615.4	chr2	+	2475	2	Antisense	novelGene_ENSMUSG00000026918.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTGGTTCAGCT	NA	False	NA	NA	False	NA	NA	NA	27395823	27398835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_27395945_27396481
ES.18616.10	chr2	-	6474	11	NIC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	192	junction_6	31.3178862632841	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365662	27335590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.12	chr2	-	5155	5	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	19592	2	8310	-2	3prime_fragment	FALSE	canonical	3	243	junction_2	19.0836972308827	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTCTGTGTGGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	27345818	27335592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324
ES.18616.14	chr2	-	5203	13	NNC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	-108	-3	intron_retention	TRUE	canonical	0	0	junction_12	77.0025252111182	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTGTCTGTGTGGTGC	NA	False	NA	-9	True	AATAAA	-11	NA	27365806	27335593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588_27365614_27365787
ES.18616.17	chr2	-	5357	14	NNC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	4	-8	intron_retention	FALSE	canonical	0	0	junction_9	115.159112977546	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGATTGTGTCTGTGT	NA	False	NA	-14	True	AATAAA	-6	NA	27365661	27335598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27350935_27351015_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.18	chr2	-	4835	11	NIC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	-22	-8	intron_retention	FALSE	canonical	0	0	junction_6	82.3592739161778	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGATTGTGTCTGTGT	NA	False	NA	-14	True	AATAAA	-6	NA	27365641	27335598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.19	chr2	-	4645	10	NIC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	3	-10	intron_retention	FALSE	canonical	0	0	junction_2	87.286246848452	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGAAGATTGTGTCTGT	NA	False	NA	-16	True	AATAAA	-4	NA	27365616	27335600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.2	chr2	-	5630	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	-206	-5	3	5	multi-exon	TRUE	canonical	1	2	junction_11	79.362022268289	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGTGCTCTTTGCT	NA	False	NA	-1	True	AATAAA	-19	NA	27365616	27335585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ES.18616.21	chr2	-	5134	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	33	105	0	-84	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAACGG	NA	False	NA	-79	True	NA	NA	NA	27365665	27335695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.22	chr2	-	4265	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	87	1067	87	-1046	multi-exon	FALSE	canonical	1	2	junction_11	79.362022268289	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTTAAGGTTACCCT	NA	False	NA	12	True	AATAAA	-24	NA	27365323	27336657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ES.18616.23	chr2	-	4195	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	-1	1078	-1	-1057	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGGTTCCATTTTTTT	NA	False	NA	1	True	AATAAA	-13	NA	27365699	27336668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.24	chr2	-	4196	13	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	1	-1060	intron_retention	FALSE	canonical	2	3	junction_11	99.0992768221175	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTAAGGTTCCATTTT	NA	False	NA	-2	True	AATAAA	-10	NA	27365664	27336671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27362587_27362627_27365588
ES.18616.25	chr2	-	3719	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	-19	1589	-6	654	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCCTGTTGGGTTTGTTG	NA	False	NA	NA	False	AATATA	-15	NA	27365704	27337200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.26	chr2	-	3670	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	-9	1611	-9	653	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCCTGTTGGGTTTGTT	NA	False	NA	NA	False	AATATA	-14	NA	27365707	27337201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.27	chr2	-	3643	13	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	22	651	intron_retention	FALSE	canonical	2	3	junction_11	99.0992768221175	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGTCCTGTTGGGTTTG	NA	False	NA	NA	False	AATATA	-12	NA	27365643	27337203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27362587_27362627_27365588
ES.18616.28	chr2	-	3228	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	37	2007	4	257	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATAAATAAGTGCATTGA	NA	False	NA	NA	False	NA	NA	NA	27365661	27337597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.29	chr2	-	10166	8	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	-22	224	intron_retention	FALSE	canonical	3	192	junction_3	36.5507754182243	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATGAAAAAGAAAAAA	NA	False	NA	NA	False	TATAAA	-34	NA	27365641	27337630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27340562_27342844_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.3	chr2	-	8742	10	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	23	5	intron_retention	FALSE	canonical	3	192	junction_5	32.9376515387617	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGTGCTCTTTGCT	NA	False	NA	-1	True	AATAAA	-19	NA	27365642	27335585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.30	chr2	-	2702	14	NNC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	6	204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2131800059226	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCATTGGTCATTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	27365659	27337650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338047_27338389_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349605_27349732_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.31	chr2	-	3118	13	NNC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	4	68	intron_retention	FALSE	canonical	0	0	junction_8	100.144062896077	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGTAAGTTCATCC	NA	False	NA	NA	False	ATTAAA	-38	NA	27365661	27337786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27350935_27351015_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.32	chr2	-	3234	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	-26	2211	-26	53	multi-exon	FALSE	canonical	1	2	junction_11	79.362022268289	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAAACAAACCTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	27365436	27337801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ES.18616.33	chr2	-	3042	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	10	2220	-3	44	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAACAAAACAAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	27365688	27337810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.34	chr2	-	2537	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	-22	2774	-9	-531	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTTCTTTTACTTCA	NA	False	NA	-15	True	AATATA	-18	NA	27365707	27338385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.35	chr2	-	2478	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	-2	2796	-2	-532	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTTTTCTTTTACTTC	NA	False	NA	-16	True	AATATA	-17	NA	27365700	27338386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.36	chr2	-	2458	13	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	-22	-532	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	99.0992768221175	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTTTTCTTTTACTTC	NA	False	NA	-16	True	AATATA	-17	NA	27365641	27338386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27362587_27362627_27365588
ES.18616.37	chr2	-	2430	13	NNC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	-1	-532	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	112.270506664336	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTTTTCTTTTACTTC	NA	False	NA	-16	True	AATATA	-17	NA	27365667	27338386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352527_27353466_27353605_27353900_27354206_27362587_27362627_27365588
ES.18616.38	chr2	-	6099	10	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	81	-533	intron_retention	FALSE	canonical	2	5	junction_9	85.3755682518189	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGGTTTTCTTTTACTT	9433	False	NA	-17	True	AATATA	-16	NA	27397593	27338387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27397501
ES.18616.39	chr2	-	2764	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	-143	2798	66	-534	multi-exon	FALSE	canonical	1	2	junction_11	79.362022268289	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTTTTCTTTTACT	NA	False	NA	-18	True	AATATA	-15	NA	27365553	27338388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ES.18616.4	chr2	-	5329	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	-14	-26	-1	5	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGTGCTCTTTGCT	NA	False	NA	-1	True	AATAAA	-19	NA	27365699	27335585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.41	chr2	-	3713	11	NIC	ENSMUSG00000026918.17	novel	5289	13	NA	NA	-1	-534	intron_retention	FALSE	canonical	3	192	junction_6	31.3178862632841	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTTTTCTTTTACT	NA	False	NA	-18	True	AATATA	-15	NA	27365699	27338388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.42	chr2	-	1679	9	ISM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	-1	7427	-1	-10	5prime_fragment	FALSE	canonical	3	192	junction_4	32.1548985381699	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAGGAAAAGGAAAA	NA	False	NA	-14	True	NA	NA	NA	27365699	27343017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ES.18616.43	chr2	-	155	1	Intergenic	novelGene_15433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	27369466	27369311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27369300_27369500
ES.18616.44	chr2	-	172	1	Intergenic	novelGene_15436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGAGGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	27378285	27378113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27378100_27378300
ES.18616.5	chr2	-	5213	12	NNC	ENSMUSG00000026918.17	novel	5419	12	NA	NA	-135	5	intron_retention	FALSE	canonical	0	0	junction_11	79.8942482854111	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGTGCTCTTTGCT	NA	False	NA	-1	True	AATAAA	-19	NA	27365833	27335585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365787
ES.18616.6	chr2	-	5225	12	NIC	ENSMUSG00000026918.17	novel	5419	12	NA	NA	113	3	intron_retention	FALSE	canonical	2	5	junction_11	78.5648124293956	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTGGTGCTCTTTG	9465	False	NA	-3	True	AATAAA	-17	NA	27397561	27335587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27397501
ES.18616.7	chr2	-	5187	12	NNC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_9	78.4520699072196	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365667	27335590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352527_27353466_27353605_27353900_27354206_27365588
ES.18616.9	chr2	-	5278	13	NIC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	0	0	intron_retention	TRUE	canonical	2	3	junction_11	99.0992768221175	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365665	27335590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27362587_27362627_27365588
ES.18617.1	chr2	-	134	1	Intergenic	novelGene_15438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAGAAAAAAAAA	3495	False	NA	NA	False	NA	NA	NA	27403531	27403397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27403400_27403500
ES.18618.1	chr2	+	2945	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	-26	-29	-26	29	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTCATTCTGTGTGCAT	NA	False	NA	62	True	NA	NA	NA	27405142	27426576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.10	chr2	+	4076	12	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	18	-3	intron_retention	FALSE	canonical	2	3	junction_6	449.42508729588	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27405186	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410671_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423424_27423779
ES.18618.11	chr2	+	2965	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	537.788252085923	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405187	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424347_27424444_27424768
ES.18618.12	chr2	+	2793	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	24	11	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_14	395.179964170291	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTTGTTTTTTCCAGG	NA	False	NA	44	True	AATAAA	-30	NA	27405192	27426558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768_27425445_27425528
ES.18618.13	chr2	+	6187	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	25	4	intron_retention	FALSE	canonical	3	1324	junction_4	118.709349767498	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATATAAGTTTGTTTT	NA	False	NA	37	True	AATAAA	-23	NA	27405193	27426551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.14	chr2	+	1562	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	25	268	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	408.12498085758	1219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGTGTCAAGTCCCTTT	NA	False	NA	13	True	NA	NA	NA	27405193	27425323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408719_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.15	chr2	+	2829	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_13	411.205890064416	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405194	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424801
ES.18618.17	chr2	+	2854	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	405.393329347302	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTCCATATAAGTTT	NA	False	NA	32	True	AATAAA	-18	NA	27405194	27426546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410420_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.19	chr2	+	2719	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	402.849803631222	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405194	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768_27424898_27425040
ES.18618.2	chr2	+	3213	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1324	junction_4	115.979494116656	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405155	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423424_27423779_27423868_27424768
ES.18618.20	chr2	+	9604	11	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	0	intron_retention	FALSE	canonical	3	1324	junction_4	125.583000441939	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405194	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27421727_27423004_27423424_27423779_27423868_27424768
ES.18618.21	chr2	+	5976	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	0	intron_retention	FALSE	canonical	3	1324	junction_4	119.529953242784	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405194	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.22	chr2	+	2771	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_14	523.247804874633	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405194	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410420_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768_27425445_27425528
ES.18618.23	chr2	+	1638	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	28	1224	28	268	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGTGTCAAGTCCCTTT	NA	False	NA	13	True	NA	NA	NA	27405196	27425323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.24	chr2	+	2874	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	417.860753681721	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405199	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408623_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.25	chr2	+	5539	7	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	34	-3577	intron_retention	FALSE	canonical	3	1324	junction_4	155.299352506341	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGGTCTACAGATGTA	NA	False	NA	NA	False	NA	NA	NA	27405202	27419790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410924_27415117
ES.18618.26	chr2	+	3758	13	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	34	0	intron_retention	FALSE	non_canonical	0	0	junction_4	434.43573716054	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405202	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410337_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779
ES.18618.27	chr2	+	3017	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	36	-2	intron_retention	FALSE	canonical	3	1324	junction_4	117.270579809639	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405204	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.29	chr2	+	2761	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	37	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	430.158199258004	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405205	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.30	chr2	+	1628	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	37	269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	413.601285864344	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTCAAGTCCCTTTG	NA	False	NA	14	True	NA	NA	NA	27405205	27425324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410433_27410590_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.31	chr2	+	1686	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	37	339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	417.860753681721	1223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTCACTGGTATCA	NA	False	NA	9	True	NA	NA	NA	27405205	27425394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408654_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.32	chr2	+	2848	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	413.601285864344	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27405205	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410433_27410590_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.33	chr2	+	4740	13	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	38	268	intron_retention	FALSE	canonical	3	1324	junction_4	119.529953242784	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGTGTCAAGTCCCTTT	NA	False	NA	13	True	NA	NA	NA	27405206	27425323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.34	chr2	+	1442	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	38	1410	38	82	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGTTGTTTTTCTCTGT	NA	False	NA	20	True	NA	NA	NA	27405206	27425137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.35	chr2	+	5249	9	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	38	-3577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	522.269027896543	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGGTCTACAGATGTA	NA	False	NA	NA	False	NA	NA	NA	27405206	27419790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27412297_27413499_27415174_27418285
ES.18618.38	chr2	+	6978	12	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	40	0	intron_retention	TRUE	non_canonical	0	0	junction_9	449.64369732651	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405208	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27422111_27422682_27423424_27423779_27423868_27424768
ES.18618.39	chr2	+	7024	11	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	41	-3	intron_retention	FALSE	canonical	3	1324	junction_4	126.896178035432	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27405209	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410924_27415117_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779
ES.18618.4	chr2	+	7221	11	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1324	junction_4	124.793469380413	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405160	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27421727_27423004_27423424_27423779
ES.18618.40	chr2	+	7567	12	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	42	0	intron_retention	FALSE	non_canonical	0	0	junction_9	449.268588333093	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405210	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27422111_27422682_27423039_27423348_27423424_27423779
ES.18618.41	chr2	+	2834	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	414.596531610756	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405216	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410845_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.44	chr2	+	7980	11	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	50	-27	intron_retention	FALSE	non_canonical	0	0	junction_7	614.048866133633	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAGATTTTCATGC	NA	False	NA	6	True	AATACA	-11	NA	27405218	27426520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410924_27415117_27418014_27420457_27422111_27422682_27423424_27423779_27423868_27424768
ES.18618.46	chr2	+	6992	13	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	50	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	433.030430993789	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405218	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27417469_27419744_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.47	chr2	+	3836	11	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	50	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	468.130590754332	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27405218	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410683_27420472_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.48	chr2	+	2821	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	50	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	414.596531610756	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAATTTTGTTCCATAT	NA	False	NA	26	True	AATAAA	-12	NA	27405218	27426540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410663_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.49	chr2	+	6257	12	NIC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	50	-5	intron_retention	FALSE	canonical	3	1324	junction_4	121.096368973278	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTTGTTCCATATAA	NA	False	NA	28	True	AATAAA	-14	NA	27405218	27426542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27418333_27421650_27421727_27423004_27423424_27423779_27423868_27424768
ES.18618.51	chr2	+	2807	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	71	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.860753681721	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27405239	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405284_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.52	chr2	+	3069	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	71	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	539.307984402991	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAGATTTTCATGC	NA	False	NA	6	True	AATACA	-11	NA	27405239	27426520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27405868_27406146_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.54	chr2	+	2799	13	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	72	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	432.546015535406	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405240	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423331_27423424_27423779_27423868_27424768
ES.18618.55	chr2	+	3221	14	NNC	ENSMUSG00000026917.16	novel	1031	12	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	413.502960358027	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405309	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405765_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.56	chr2	+	2966	14	NNC	ENSMUSG00000026917.16	novel	1031	12	NA	NA	224	-2	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	411.965802567649	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405392	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405595_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.58	chr2	+	4292	14	NNC	ENSMUSG00000026917.16	novel	1031	12	NA	NA	255	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	409.660950878353	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405423	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27406952_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.59	chr2	+	4781	13	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	1430	27	1430	-27	3prime_fragment	FALSE	canonical	3	1324	junction_3	118.150210419712	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAGATTTTCATGC	NA	False	NA	6	True	AATACA	-11	NA	27406598	27426520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.6	chr2	+	2808	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	408.12498085758	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27405169	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408719_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.60	chr2	+	2715	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	-1015	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	555.791189345285	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27408757	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27415472_27415541_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.61	chr2	+	2602	12	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4190	2	-414	-2	3prime_fragment	FALSE	canonical	3	1324	junction_2	83.7387712961076	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27409358	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.63	chr2	+	3397	10	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4581	2	-23	-2	intron_retention	FALSE	canonical	3	1324	junction_1	85.9178476406962	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	False	NA	31	True	AATAAA	-17	NA	27409749	27426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779
ES.18618.64	chr2	+	2495	11	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	4581	3	-23	-3	3prime_fragment	FALSE	canonical	3	1324	junction_1	83.2900954495791	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27409749	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.65	chr2	+	7521	2	NNC	ENSMUSG00000026917.16	novel	678	4	NA	NA	653	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCATGCCTTGTAATT	NA	False	NA	15	True	AATAAA	-1	NA	27418436	27426529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27422111_27422682
ES.18618.66	chr2	+	6006	4	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	929	0	intron_retention	FALSE	non_canonical	0	0	junction_1	705.396500007069	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27418712	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27422111_27422682_27423424_27423779_27423868_27424768
ES.18618.67	chr2	+	5710	4	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	13722	3	1107	-3	intron_retention	FALSE	canonical	3	1406	junction_2	67.9264307909668	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTTCCATATAAGT	NA	False	NA	30	True	AATAAA	-16	NA	27418890	27426544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27421727_27423004_27423039_27423348_27423424_27423779
ES.18618.68	chr2	+	2097	5	ISM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	15213	1224	2598	268	3prime_fragment	FALSE	canonical	3	1406	junction_2	64.6625857818878	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGTGTCAAGTCCCTTT	NA	False	NA	13	True	NA	NA	NA	27420381	27425323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18618.7	chr2	+	2900	16	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	607.647097874708	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405170	27426547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424347_27424444_27424768_27425445_27425528
ES.18618.8	chr2	+	1784	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	13	1093	13	399	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTGTGGCCCTGAGTT	NA	False	NA	69	True	AATAAA	-13	NA	27405181	27425454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ES.18619.1	chr2	-	153	1	Intergenic	novelGene_15439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	27408015	27407862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27407900_27408000
ES.1862.1	chr1	-	2874	2	FSM	ENSMUSG00000026656.16	ENSMUST00000161503.2	802	2	44	-2116	44	-1	multi-exon	FALSE	canonical	3	55	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGGGTTATTTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	170789155	170786186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170788670_170788764
ES.1862.10	chr1	-	2852	8	NNC	ENSMUSG00000026656.16	novel	3544	8	NA	NA	-2168	-9	intron_retention	FALSE	canonical	1	2	junction_7	26.0204001600628	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170806284	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469_170804885_170806073
ES.1862.11	chr1	-	1347	6	NNC	ENSMUSG00000026656.16	novel	1462	7	NA	NA	-7017	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.4042250378355	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170796216	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170796074
ES.1862.13	chr1	-	2806	4	ISM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	7475	105	-7022	71	intron_retention	FALSE	canonical	3	38	junction_2	7.03957069398096	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCTGTCAAAGATGATG	NA	False	NA	NA	False	GATAAA	-12	NA	170796221	170788231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014
ES.1862.2	chr1	-	7039	6	NIC	ENSMUSG00000026656.16	novel	1462	7	NA	NA	-689	0	intron_retention	FALSE	canonical	3	21	junction_5	24.6981780704569	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCTATTTACTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	170804805	170788126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170788670_170788764_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
ES.1862.3	chr1	-	3777	8	NNC	ENSMUSG00000026656.16	novel	3544	8	NA	NA	-2125	-2	intron_retention	FALSE	canonical	0	0	junction_7	26.4359063180581	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTTTCTATTTACTT	NA	False	NA	NA	False	AGTAAA	-15	NA	170806241	170788128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469_170804885_170805112
ES.1862.4	chr1	-	2638	9	NNC	ENSMUSG00000026656.16	novel	1578	10	NA	NA	-2097	-9	intron_retention	FALSE	canonical	1	2	junction_8	26.713468045164	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170806213	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469_170803617_170803759_170804885_170806073
ES.1862.5	chr1	-	1664	9	NIC	ENSMUSG00000026656.16	novel	1578	10	NA	NA	-25	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	27.0297868101101	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170804141	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469_170803617_170803759_170803915_170804005
ES.1862.6	chr1	-	1524	8	FSM	ENSMUSG00000026656.16	ENSMUST00000027966.14	3544	8	70	1950	70	-9	multi-exon	FALSE	canonical	1	1	junction_3	28.4224688353049	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170803626	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170788670_170788764_170788803_170790893_170791035_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
ES.1862.8	chr1	-	2994	8	NNC	ENSMUSG00000026656.16	novel	3544	8	NA	NA	-2123	-9	intron_retention	FALSE	canonical	0	0	junction_4	20.0122411518142	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170806239	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794457_170795548_170795804_170797042_170797064_170803469_170804885_170806073
ES.1862.9	chr1	-	1874	9	NNC	ENSMUSG00000026656.16	novel	1578	10	NA	NA	-372	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.0297868101101	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACCATCTTTCTA	NA	False	NA	NA	False	AGTAAA	-8	NA	170804488	170788135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469_170803617_170803759_170803978_170804205
ES.18620.1	chr2	-	183	1	Intergenic	novelGene_15440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	27412152	27411969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27412000_27412200
ES.18621.1	chr2	-	483	1	Intergenic	novelGene_15441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27413308	27412825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27412800_27413300
ES.18622.1	chr2	-	2205	2	Antisense	novelGene_ENSMUSG00000026917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGGATAATGCCATT	2355	False	NA	NA	False	NA	NA	NA	27424671	27422110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_27423422_27423777
ES.18623.1	chr2	-	187	1	Intergenic	novelGene_15442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATTTTTTTTCTCC	22	True	NA	NA	False	NA	NA	NA	27427004	27426817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27426800_27427000
ES.18624.1	chr2	+	2399	1	Genic_Genomic	ENSMUSG00000085929.2	novel	NA	NA	NA	NA	-248	-609	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTCTTTTACTGAACA	NA	False	NA	NA	False	NA	NA	NA	27430189	27432588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_27430200_27432600
ES.18624.2	chr2	+	3545	2	NNC	ENSMUSG00000085929.2	novel	803	2	NA	NA	-43	2728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCTGTGTGCATCTGT	NA	False	NA	9	True	NA	NA	NA	27430394	27436102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27430578_27432740
ES.18624.3	chr2	+	3446	2	FSM	ENSMUSG00000085929.2	ENSMUST00000132898.2	549	2	4	-2901	4	2724	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTCTCCTGTGTGCAT	NA	False	NA	5	True	NA	NA	NA	27430444	27436098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27430533_27432740
ES.18624.4	chr2	+	3522	2	FSM	ENSMUSG00000085929.2	ENSMUST00000142511.2	803	2	9	-2728	6	2728	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCTGTGTGCATCTGT	NA	False	NA	9	True	NA	NA	NA	27430446	27436102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27430607_27432740
ES.18624.5	chr2	+	5653	1	Genic_Genomic	ENSMUSG00000085929.2	novel	NA	NA	NA	NA	12	2731	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTGCATCTGTCTG	NA	False	NA	12	True	NA	NA	NA	27430452	27436105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_27430500_27436100
ES.18624.6	chr2	+	1814	2	Intergenic	novelGene_15443	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCCTGTGTGCATCT	NA	False	NA	7	True	NA	NA	NA	27434244	27436100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_27434901_27434942
ES.18625.1	chr2	-	170	1	Intergenic	novelGene_15444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTACAATGTGAA	5645	False	NA	NA	False	NA	NA	NA	27442278	27442108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27442100_27442300
ES.18626.1	chr2	+	3321	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-237	1821	-237	-281	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCCTGTATCCCTTCT	NA	False	NA	NA	False	CATAAA	-14	NA	27566975	27651148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.10	chr2	+	2078	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	62	2765	1	9	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	NA	False	NA	3	True	TATAAA	-11	NA	27567274	27650204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.11	chr2	+	1811	8	NIC	ENSMUSG00000015846.16	novel	4905	10	NA	NA	47	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	32.3892146321858	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTGAGATATCACTCC	NA	False	NA	7	True	TATAAA	-15	NA	27567320	27650208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27647772_27647879_27649552
ES.18626.12	chr2	+	1802	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	146	2957	85	-183	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTCTGGTTGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	27567358	27650012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.13	chr2	+	1863	9	NIC	ENSMUSG00000015846.16	novel	673	4	NA	NA	33	9	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	28.6879765755621	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	5048	False	NA	3	True	TATAAA	-11	NA	27630245	27650204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27630495_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.14	chr2	+	4621	9	NIC	ENSMUSG00000015846.16	novel	673	4	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	28.6879765755621	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTGTGTTGGGGAGT	5055	False	NA	28	True	AATATA	-18	NA	27630252	27652969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27630495_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.15	chr2	+	4931	8	ISM	ENSMUSG00000015846.16	ENSMUST00000238913.2	1631	10	15282	-3269	300	0	3prime_fragment	FALSE	canonical	3	73	junction_2	8.39825054668518	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTGTGTTGGGGAGT	5315	False	NA	28	True	AATATA	-18	NA	27630512	27652969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.16	chr2	+	2151	8	ISM	ENSMUSG00000015846.16	ENSMUST00000238913.2	1631	10	15297	-504	315	9	3prime_fragment	FALSE	canonical	3	73	junction_2	8.39825054668518	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGCCCTGAGATATCA	5330	False	NA	3	True	TATAAA	-11	NA	27630527	27650204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.2	chr2	+	1902	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-122	3125	-122	144	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTACTCATGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	27567090	27649844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.3	chr2	+	3802	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-113	1216	-113	324	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCTCTAACATCAGCTC	NA	False	NA	NA	False	NA	NA	NA	27567099	27651753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.4	chr2	+	5020	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-113	-2	-113	2	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGTTGGGGAGTCC	NA	False	NA	30	True	AATATA	-20	NA	27567099	27652971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.5	chr2	+	2356	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	-112	2661	-112	113	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATCGTCCCTCTTCAT	NA	False	NA	107	True	NA	NA	NA	27567100	27650308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.6	chr2	+	5219	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	10	-324	10	324	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGTGCCATCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	27567222	27653293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.8	chr2	+	4433	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	47	425	-14	-425	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCCTCATGTAA	NA	False	NA	NA	False	AATGAA	-19	NA	27567259	27652544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18626.9	chr2	+	2005	11	NNC	ENSMUSG00000015846.16	novel	3216	11	NA	NA	-10	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.6330228931561	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCCCTGAGATATCAC	NA	False	NA	4	True	TATAAA	-12	NA	27567263	27650205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27567302_27567386_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ES.18627.1	chr2	+	6433	65	NIC	ENSMUSG00000026837.17	novel	8406	66	NA	NA	-55	126	combination_of_known_splicesites	TRUE	canonical	0	0	junction_63	12.7869791560595	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAAGTGTGCCTG	NA	False	NA	37	True	AGTAAA	-19	NA	27776381	27927567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27922602_27922837_27926881
ES.18627.10	chr2	+	3468	36	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	103611	1957	-27405	128	3prime_fragment	FALSE	canonical	3	23	junction_3	10.0810592252025	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAAGTGTGCCTGGC	NA	False	NA	39	True	AGTAAA	-21	NA	27880047	27927569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.11	chr2	+	4133	22	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	123596	357	-7420	-357	3prime_fragment	FALSE	canonical	3	25	junction_2	9.11105580426773	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGGCATCATTTTCC	4736	False	NA	NA	False	AATAAA	-24	NA	27900032	27929169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.12	chr2	+	3367	6	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	135855	5	-6	-5	3prime_fragment	FALSE	canonical	3	32	junction_4	5.16139516022558	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTGACTAGCTGTCT	401	False	NA	NA	False	AATAAA	-22	NA	27912291	27929521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.2	chr2	+	6511	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	-53	1948	-53	137	multi-exon	FALSE	canonical	2	10	junction_13	12.1052973880063	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTGGCTTTCAGTCT	NA	False	NA	48	True	AGTAAA	-30	NA	27776383	27927578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.3	chr2	+	7626	67	NNC	ENSMUSG00000026837.17	novel	8406	66	NA	NA	-11	-362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_66	12.6038842089791	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCCTCTGGCATCAT	NA	False	NA	NA	False	AATAAA	-19	NA	27776425	27929164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881_27927518_27927946
ES.18627.4	chr2	+	8417	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	-11	0	-11	0	multi-exon	FALSE	canonical	2	10	junction_13	12.1052973880063	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTAGCTGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	27776425	27929526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.5	chr2	+	7962	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	96	348	96	-348	multi-exon	FALSE	canonical	2	10	junction_13	12.1052973880063	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTTTCCGTTTCCATT	NA	False	NA	NA	False	AATAAA	-33	NA	27776532	27929178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.6	chr2	+	3924	44	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	88018	1959	-42998	126	3prime_fragment	FALSE	canonical	3	23	junction_8	10.0717276141477	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAAGTGTGCCTG	NA	False	NA	37	True	AGTAAA	-19	NA	27864454	27927567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.7	chr2	+	4262	44	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	88019	1620	-42997	465	3prime_fragment	FALSE	canonical	3	23	junction_8	10.0717276141477	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGATTGCTTCCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	27864455	27927906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.8	chr2	+	5730	41	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	94046	0	-36970	0	3prime_fragment	FALSE	canonical	3	23	junction_5	9.96039030359755	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTAGCTGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	27870482	27929526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18627.9	chr2	+	3578	37	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	102713	1954	-28303	131	3prime_fragment	FALSE	canonical	3	23	junction_1	10.2400207368617	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAAGTGTGCCTGGCTTT	NA	False	NA	42	True	AGTAAA	-24	NA	27879149	27927572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ES.18628.1	chr2	-	179	1	Intergenic	novelGene_15445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTAACCAGAAT	NA	False	NA	NA	False	NA	NA	NA	27827647	27827468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_27827500_27827600
ES.18629.1	chr2	+	929	3	NIC	ENSMUSG00000026833.19	novel	1102	4	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	10.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTGGTGTTCTGAG	6517	False	NA	3	True	AATAAA	-11	NA	28083026	28104437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28083475_28102543_28102700_28104112
ES.18629.2	chr2	+	2803	6	FSM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	-48	2	-48	-2	multi-exon	FALSE	canonical	3	35	junction_4	5.85149553533112	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGATTTGCTTATTGT	155	False	NA	NA	False	AATAAA	-14	NA	28095622	28120746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
ES.18629.3	chr2	+	2717	7	NNC	ENSMUSG00000026833.19	novel	2757	6	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7427606520393	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGATTTGCTTATTGT	187	False	NA	NA	False	AATAAA	-14	NA	28095654	28120746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28095821_28095874_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
ES.18629.4	chr2	+	1072	4	FSM	ENSMUSG00000026833.19	ENSMUST00000102879.4	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	11.7756811551038	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTGGTGTTCTGAG	203	False	NA	3	True	AATAAA	-11	NA	28095670	28104437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104112
ES.18629.5	chr2	+	1817	4	ISM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	6	15052	6	1259	5prime_fragment	FALSE	canonical	3	43	junction_1	3.39934634239519	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAAGGACCTGGGTTC	209	False	NA	NA	False	AATAAA	-18	NA	28095676	28105696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620
ES.18629.6	chr2	+	2632	5	NIC	ENSMUSG00000026833.19	novel	2757	6	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	19.9921859735248	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTCGATTTGCTTATT	217	False	NA	NA	False	AATAAA	-12	NA	28095684	28120744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28119065
ES.1863.1	chr1	+	1119	3	NNC	ENSMUSG00000104340.2	novel	1163	3	NA	NA	-3132	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTTTACTCTTTT	NA	False	NA	8	True	AATAAA	-19	NA	170806380	170814035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_170806474_170811302_170811532_170813238
ES.1863.2	chr1	+	509	3	NNC	ENSMUSG00000104340.2	novel	1163	3	NA	NA	-3130	-2208	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	170806382	170811827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_170806474_170811302_170811532_170811638
ES.1863.3	chr1	+	3277	1	Genic_Genomic	ENSMUSG00000104340.2	novel	NA	NA	NA	NA	-3129	-4375	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTTTAGTTATGG	NA	False	NA	NA	False	NA	NA	NA	170806383	170809660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_170806400_170809700
ES.1863.4	chr1	+	5060	2	NNC	ENSMUSG00000104340.2	novel	1163	3	NA	NA	-2926	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGTTTTTACTCTT	NA	False	NA	6	True	AATAAA	-17	NA	170806586	170814033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_170810833_170813219
ES.1863.5	chr1	+	4562	3	NNC	ENSMUSG00000104340.2	novel	1163	3	NA	NA	-2197	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTTTACTCTTTT	NA	False	NA	8	True	AATAAA	-19	NA	170807315	170814035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_170810833_170811302_170811532_170813219
ES.18630.1	chr2	+	150	1	Intergenic	novelGene_15446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	28329414	28329564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28329400_28329600
ES.18631.1	chr2	-	3305	7	NNC	ENSMUSG00000087196.2	novel	655	3	NA	NA	-117772	-4622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.11476292340825	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTGCTCTCTGCTTCC	NA	False	NA	NA	False	NA	NA	NA	28331834	28209649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28210292_28213889_28214062_28215092_28215159_28218116_28218217_28277914_28280026_28280190_28280281_28331710
ES.18631.2	chr2	-	2370	10	NNC	ENSMUSG00000087196.2	novel	655	3	NA	NA	-57941	-4629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.415739709641549	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCATTCATTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	28272003	28209656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28210292_28213889_28214062_28215092_28215159_28218116_28218217_28235781_28235964_28244773_28244877_28245619_28245696_28256404_28256484_28269991_28270124_28271178
ES.18632.1	chr2	+	6804	3	FSM	ENSMUSG00000035829.14	ENSMUST00000040324.14	5466	3	-1337	-1	-196	1	multi-exon	FALSE	canonical	3	12	junction_2	2	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTTCTTTGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	28336615	28345521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28337995_28338703_28338921_28340313
ES.18632.10	chr2	+	3981	3	NIC	ENSMUSG00000035829.14	novel	617	4	NA	NA	2	-1350	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATTTTTATTTAATG	NA	False	NA	NA	False	TATAAA	-24	NA	28336879	28344167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28336909_28337896_28337995_28340313
ES.18632.11	chr2	+	6111	4	FSM	ENSMUSG00000035829.14	ENSMUST00000128199.8	617	4	73	-5567	7	565	multi-exon	FALSE	canonical	2	11	junction_1	2.16024689946929	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	28336884	28346085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28336909_28337896_28337995_28338703_28338921_28340313
ES.18632.12	chr2	+	5935	4	NNC	ENSMUSG00000035829.14	novel	617	4	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.79869268479038	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTCCTTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	28336907	28345516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28337325_28337896_28337995_28338703_28338921_28340313
ES.18632.13	chr2	+	5065	3	FSM	ENSMUSG00000035829.14	ENSMUST00000189694.2	5463	3	-936	1334	139	-1334	multi-exon	FALSE	canonical	3	12	junction_2	2	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGTGTCCTGGTACA	NA	False	NA	NA	False	TATAAA	-40	NA	28337016	28344183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28337995_28338703_28338921_28340313
ES.18632.2	chr2	+	6586	2	NIC	ENSMUSG00000035829.14	novel	5466	3	NA	NA	-196	0	intron_retention	FALSE	canonical	3	12	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336615	28345520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28337995_28340313
ES.18632.3	chr2	+	5677	4	NNC	ENSMUSG00000035829.14	novel	5466	3	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.79869268479038	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336628	28345520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28336784_28337896_28337995_28338703_28338921_28340313
ES.18632.4	chr2	+	5578	3	NIC	ENSMUSG00000035829.14	novel	617	4	NA	NA	-176	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336635	28345520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28336909_28337896_28337995_28340313
ES.18632.5	chr2	+	5790	4	FSM	ENSMUSG00000035829.14	ENSMUST00000128199.8	617	4	-171	-5002	-171	0	multi-exon	FALSE	canonical	2	11	junction_1	2.16024689946929	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336640	28345520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28336909_28337896_28337995_28338703_28338921_28340313
ES.18632.6	chr2	+	5996	3	NNC	ENSMUSG00000035829.14	novel	5466	3	NA	NA	-154	565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	28336657	28346085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28336784_28337896_28337995_28340313
ES.18632.7	chr2	+	5898	2	NIC	ENSMUSG00000035829.14	novel	617	4	NA	NA	-4	590	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAAAAAAAAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	28336807	28346110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28336909_28340313
ES.18632.8	chr2	+	5600	4	NNC	ENSMUSG00000035829.14	novel	5466	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.79869268479038	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28336866	28345520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28336909_28337860_28337995_28338703_28338921_28340313
ES.18632.9	chr2	+	5925	3	NIC	ENSMUSG00000035829.14	novel	617	4	NA	NA	1	590	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAAAAAAAAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	28336878	28346110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28336909_28337896_28337995_28340313
ES.18633.1	chr2	-	3480	2	NIC	ENSMUSG00000026831.17	novel	812	3	NA	NA	18	0	intron_retention	FALSE	canonical	3	142	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCACGCCTCTTATT	NA	False	NA	0	True	ATTAAA	-19	NA	28356310	28352012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28355228_28356045
ES.18633.2	chr2	-	778	4	NNC	ENSMUSG00000026831.17	novel	812	3	NA	NA	-10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	63.8957484240279	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGCCACGCCTCTTA	NA	False	NA	-2	True	ATTAAA	-17	NA	28356354	28352014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28352447_28355148_28355228_28356045_28356125_28356166
ES.18634.1	chr2	+	2090	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	-2	-8	-2	8	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTGAACCCGTACCA	NA	False	NA	36	True	NA	NA	NA	28358075	28361198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18634.10	chr2	+	4093	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	9	-2022	-7	2022	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTCCCTTTGCTTTG	NA	False	NA	NA	False	AGTAAA	-36	NA	28358086	28363212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18634.11	chr2	+	1579	5	NNC	ENSMUSG00000035772.12	novel	2080	4	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	303.327689965819	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCTGGTGTCAGACT	NA	False	NA	12	True	NA	NA	NA	28358090	28361174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28358155_28358254_28358315_28358832_28358963_28359434_28359967_28360381
ES.18634.12	chr2	+	2515	3	ISM	ENSMUSG00000035772.12	ENSMUST00000123533.8	2429	4	10	-2	2	2	intron_retention	FALSE	canonical	3	508	junction_2	56	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCAGACTCTCTA	NA	False	NA	17	True	NA	NA	NA	28358103	28361179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28358155_28358254_28358372_28358832
ES.18634.13	chr2	+	2165	5	NNC	ENSMUSG00000035772.12	novel	2429	4	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	280.38321989734	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAACTTTGAACCCGTA	NA	False	NA	33	True	NA	NA	NA	28358105	28361195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28358155_28358254_28358372_28358832_28358963_28359232_28359341_28359434
ES.18634.2	chr2	+	1864	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	-2	218	-2	-205	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTATTTTATAACCTGC	NA	False	NA	33	True	NA	NA	NA	28358075	28360972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18634.3	chr2	+	1989	3	FSM	ENSMUSG00000035772.12	ENSMUST00000146332.2	2504	3	-24	539	0	-539	multi-exon	FALSE	canonical	3	604	junction_2	8	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTGTCAAAAGTTT	NA	False	NA	17	True	NA	NA	NA	28358077	28360638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358963_28359434
ES.18634.4	chr2	+	1552	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	1	527	1	-514	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGCTGAAGTATTTT	NA	False	NA	42	True	NA	NA	NA	28358078	28360663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18634.5	chr2	+	2441	4	FSM	ENSMUSG00000035772.12	ENSMUST00000123533.8	2429	4	-15	3	1	-3	multi-exon	FALSE	canonical	0	0	junction_3	269.775215071116	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCTGGTGTCAGACT	NA	False	NA	12	True	NA	NA	NA	28358078	28361174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28359341_28359434
ES.18634.6	chr2	+	2317	3	FSM	ENSMUSG00000035772.12	ENSMUST00000146332.2	2504	3	-23	210	1	-210	multi-exon	FALSE	canonical	3	604	junction_2	8	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCACAAGTATTTTATAA	NA	False	NA	28	True	NA	NA	NA	28358078	28360967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358963_28359434
ES.18634.7	chr2	+	2664	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	1	-585	1	585	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTTTGTTTGATCTG	NA	False	NA	NA	False	NA	NA	NA	28358078	28361775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18634.8	chr2	+	1924	4	FSM	ENSMUSG00000035772.12	ENSMUST00000123533.8	2429	4	-15	520	1	-520	multi-exon	FALSE	canonical	0	0	junction_3	269.775215071116	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCATGTTTGGCTGAAG	NA	False	NA	36	True	NA	NA	NA	28358078	28360657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28359341_28359434
ES.18634.9	chr2	+	1111	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	9	960	-7	-947	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTCTGGCATCCATTA	NA	False	NA	NA	False	NA	NA	NA	28358086	28360230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ES.18635.1	chr2	-	171	1	Intergenic	novelGene_15447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGAAGTGAGGGC	NA	False	NA	NA	False	NA	NA	NA	28366220	28366049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28366000_28366200
ES.18636.1	chr2	+	97	1	FSM	ENSMUSG00000082895.2	ENSMUST00000120702.2	885	1	855	-67	855	67	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	28368032	28368129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28368000_28368100
ES.18637.1	chr2	+	1059	3	Intergenic	novelGene_15448	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCCATCCGCCGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	28369394	28377012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28369616_28370436_28370687_28376424
ES.18637.2	chr2	+	3901	8	Fusion	ENSMUSG00000063611.6_ENSMUSG00000026829.10	novel	1335	7	NA	NA	-17508	7	multi-exon	FALSE	canonical	0	0	junction_2	2.26778683805536	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGTGTCCCTT	NA	False	NA	15	True	NA	NA	NA	28369394	28397792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_28369616_28386911_28387077_28387691_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
ES.18637.3	chr2	+	4332	10	Fusion	ENSMUSG00000063611.6_ENSMUSG00000026829.10	novel	1335	7	NA	NA	-17495	7	multi-exon	FALSE	canonical	0	0	junction_1	2.26077666104176	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGTGTCCCTT	NA	False	NA	15	True	NA	NA	NA	28369407	28397792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_28369616_28370487_28370687_28386911_28387077_28387680_28387849_28388387_28388454_28389196_28389288_28392078_28392130_28392208_28392245_28392994_28393273_28394722
ES.18637.4	chr2	+	3885	8	Fusion	ENSMUSG00000063611.6_ENSMUSG00000026829.10	novel	1335	7	NA	NA	-17484	4	multi-exon	FALSE	canonical	1	1	junction_2	2.0995626366713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGTGTCC	NA	False	NA	12	True	NA	NA	NA	28369418	28397789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_28369616_28386911_28387077_28387680_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
ES.18637.5	chr2	+	3710	7	FSM	ENSMUSG00000063611.6_ENSMUSG00000026829.10	ENSMUST00000163121.8	1335	7	-17	-2358	-17	0	multi-exon	FALSE	canonical	1	1	junction_1	2.21108319357027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCCTTGGTCATGT	4558	False	NA	8	True	NA	NA	NA	28386885	28397785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28387077_28387680_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
ES.18637.6	chr2	+	1326	3	ISM	ENSMUSG00000026829.10	ENSMUST00000127958.8	632	6	119	3784	119	-3784	5prime_fragment	FALSE	canonical	1	1	junction_1	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCTGGCTATTATTAT	4694	False	NA	NA	False	NA	NA	NA	28387021	28389490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28387077_28387680_28387849_28388387
ES.18637.7	chr2	+	1349	1	FSM	ENSMUSG00000063611.6	ENSMUST00000238539.2	1675	1	1317	-991	1317	991	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAGTGTATAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	28397427	28398776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28397400_28398800
ES.18638.1	chr2	-	156	1	Intergenic	novelGene_15449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAATAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	28391994	28391838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28391800_28392000
ES.18639.1	chr2	-	178	1	Intergenic	novelGene_15450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGGGGGGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	28392788	28392610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28392600_28392800
ES.1864.1	chr1	+	180	1	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATGTGTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	170829073	170829253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170829100_170829300
ES.18640.1	chr2	-	997	1	Antisense	novelGene_ENSMUSG00000063611.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28397151	28396154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_28396200_28397200
ES.18641.1	chr2	+	3838	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-247	-1	-46	1	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTTACTGTTTTTA	NA	False	NA	26	True	ATTAAA	-27	NA	28403090	28443094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.10	chr2	+	3713	18	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	21.2976922576539	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28403255	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437532_28437633_28438124_28438158_28438395_28438518_28438606_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.11	chr2	+	3012	16	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-52	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.6633895574717	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGGTTTTACTGTTT	NA	False	NA	23	True	ATTAAA	-24	NA	28403285	28443091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.14	chr2	+	5147	17	ISM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	-41	12	-41	-1	intron_retention	FALSE	canonical	3	33	junction_3	10.9079959204246	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403296	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460
ES.18641.15	chr2	+	3412	18	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	18.6105599372096	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28403298	28443083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439472_28439545_28440460_28440576_28442103
ES.18641.16	chr2	+	2828	19	Fusion	ENSMUSG00000026821.17_ENSMUSG00000087667.9	novel	3590	18	NA	NA	-38	3	multi-exon	FALSE	canonical	0	0	junction_15	24.114439094441	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCGTGTGTGTAATTT	NA	False	NA	NA	False	AAGAAA	-4	NA	28403299	28466713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439472_28439545_28440460_28440576_28464982_28465050_28466419
ES.18641.17	chr2	+	3488	19	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1493080161299	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403301	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28403348_28403473_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.18	chr2	+	3717	17	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-35	0	intron_retention	FALSE	canonical	2	3	junction_14	18.0104136543279	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28403302	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439475_28439545_28440460_28440576_28442103
ES.18641.19	chr2	+	3800	17	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	33	junction_3	10.9585511702049	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403304	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.2	chr2	+	3735	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	17.2744986757437	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403095	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433650_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.20	chr2	+	4213	15	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	22	junction_3	13.6144056358082	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28403331	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439545_28440460_28440576_28442103
ES.18641.21	chr2	+	3599	18	FSM	ENSMUSG00000026821.17	ENSMUST00000113893.8	3683	18	87	-3	87	-1	multi-exon	FALSE	canonical	2	4	junction_1	17.9576587741977	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28423453	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.22	chr2	+	4233	18	NNC	ENSMUSG00000026821.17	novel	3683	18	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	21.8579877000967	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28423467	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28441456
ES.18641.23	chr2	+	3622	18	FSM	ENSMUSG00000026821.17	ENSMUST00000100241.10	3102	18	-86	-434	-86	0	multi-exon	FALSE	canonical	2	4	junction_1	16.9096929677323	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28423467	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.24	chr2	+	2990	15	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	563	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.1883568947448	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTGGTCACTGTGGTT	NA	False	NA	14	True	ATTAAA	-15	NA	28432907	28443082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435434_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.25	chr2	+	3638	4	NIC	ENSMUSG00000026821.17	novel	4409	17	NA	NA	59	1	intron_retention	FALSE	canonical	3	60	junction_2	6.12825877028341	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGTCACTGTGGTTT	NA	False	NA	15	True	ATTAAA	-16	NA	28437620	28443083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28438518_28438681_28439169_28439301_28440576_28442103
ES.18641.3	chr2	+	3788	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-39	5	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCACTGTGGTTTTACT	NA	False	NA	19	True	ATTAAA	-20	NA	28403097	28443087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.4	chr2	+	3616	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	17.0647048685037	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCACTGTGGTTTTACTG	NA	False	NA	20	True	ATTAAA	-21	NA	28403132	28443088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439475_28439545_28440460_28440576_28442103
ES.18641.5	chr2	+	3657	17	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	16.8614528955841	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403147	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.6	chr2	+	4043	17	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	20	-5	intron_retention	FALSE	canonical	3	22	junction_3	12.303296052278	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCACTGTGGTTTTACTG	NA	False	NA	20	True	ATTAAA	-21	NA	28403156	28443088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.7	chr2	+	3557	17	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	78	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	17.9752433919544	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTCACTGTGGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	28403214	28443084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28403573_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.8	chr2	+	3758	18	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6963518796762	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTTTTACTGTTTTT	NA	False	NA	25	True	ATTAAA	-26	NA	28403242	28443093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432793_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18641.9	chr2	+	3488	19	NNC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	-88	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1224402194123	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCCTGGTCACTGTGGT	NA	False	NA	13	True	ATTAAA	-14	NA	28403249	28443081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28403349_28403490_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ES.18642.1	chr2	-	2739	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	13	-13	1	13	multi-exon	TRUE	canonical	3	147	junction_7	20.5992858738452	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTGGTCACCTGGCAT	NA	False	NA	-36	True	AATAAA	-35	NA	28473278	28456309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ES.18642.2	chr2	-	2523	11	NIC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.6384758957324	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCACTGGTGTTTGATGC	NA	False	NA	-52	True	AATAAA	-19	NA	28473277	28456325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28469529_28469750_28472836
ES.18642.3	chr2	-	2627	12	NNC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8281624652019	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCACTGGTGTTTGATG	NA	False	NA	-53	True	AATAAA	-18	NA	28473001	28456326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28457190_28457437_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ES.18642.4	chr2	-	3107	11	NIC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	1	-4	intron_retention	FALSE	canonical	3	147	junction_6	18.5916647990437	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCACTGGTGTTTGATG	NA	False	NA	-53	True	AATAAA	-18	NA	28472999	28456326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28457190_28457619_28457797_28458496_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ES.18642.5	chr2	-	7164	11	NNC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	29	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	56.4850422678429	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCACTGGTGTTTGATG	NA	False	NA	-53	True	AATAAA	-18	NA	28473172	28456326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28461240_28462207_28462313_28463388_28464999_28465172_28468087_28469529_28469750_28472836
ES.18642.6	chr2	-	2454	12	NNC	ENSMUSG00000026816.15	novel	2739	12	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	51.7599353659847	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCACTGGTGTTTG	NA	False	NA	-56	True	AATAAA	-15	NA	28473001	28456329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469762_28472836
ES.18642.7	chr2	-	6349	8	NIC	ENSMUSG00000026816.15	novel	2667	12	NA	NA	-25	-7	intron_retention	FALSE	canonical	3	147	junction_5	20.2545031526124	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCACTGGTGTTTG	NA	False	NA	-56	True	AATAAA	-15	NA	28473025	28456329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28457190_28457619_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28463585_28467887_28469750_28472836
ES.18643.1	chr2	+	240	1	Intergenic	novelGene_15451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTAGGGAGCCGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	28495262	28495502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28495300_28495500
ES.18644.1	chr2	+	246	1	Intergenic	novelGene_15452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAATATTTCATTCTTT	5924	False	NA	NA	False	AATACA	-8	NA	28523407	28523653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28523400_28523700
ES.18645.1	chr2	+	3949	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	-194	3919	-185	-1300	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGTCTGAGCAGCT	3258	False	NA	NA	False	NA	NA	NA	28531054	28577260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.10	chr2	+	4868	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	7	2799	1	-180	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATTGTTGCCTGATA	3459	False	NA	9	True	AATAAA	-11	NA	28531255	28578380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.11	chr2	+	1660	10	ISM	ENSMUSG00000026812.17	ENSMUST00000156857.8	1711	11	16	214	1	-214	5prime_fragment	FALSE	canonical	3	29	junction_1	12.154357040244	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAAAGAAAATGCTG	3459	False	NA	NA	False	NA	NA	NA	28531255	28562305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ES.18645.12	chr2	+	4045	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	1	-1032	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACAACTGGGTGGCTCT	3459	False	NA	66	True	NA	NA	NA	28531255	28577528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.13	chr2	+	4789	23	NNC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	1	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.5105925881429	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGTTGCCTGATAT	3459	False	NA	10	True	AATAAA	-12	NA	28531255	28578381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531303_28542180_28542249_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560945_28561057_28561777_28561894_28562409_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.14	chr2	+	1590	10	ISM	ENSMUSG00000026812.17	ENSMUST00000153625.8	2388	11	-3	1498	-3	-252	5prime_fragment	FALSE	canonical	3	21	junction_1	13.8198283028765	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	3462	False	NA	NA	False	NA	NA	NA	28531258	28562267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ES.18645.16	chr2	+	5272	21	NNC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1151	intron_retention	FALSE	canonical	1	2	junction_15	15.0760571768616	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGGGTCTGTGCTTC	3465	False	NA	-53	True	NA	NA	NA	28531261	28577409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565780_28566011_28566571_28568173_28569352_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.17	chr2	+	5637	22	NIC	ENSMUSG00000026812.17	novel	7682	23	NA	NA	1	-179	intron_retention	FALSE	canonical	3	29	junction_1	10.6821741016244	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGTTGCCTGATAT	3466	False	NA	10	True	AATAAA	-12	NA	28531262	28578381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.18	chr2	+	3679	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	8	3995	1	-1376	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGTCTGTCAGTGTTC	3466	False	NA	NA	False	NA	NA	NA	28531262	28577184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.2	chr2	+	4019	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	-2	3657	-2	-1038	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTCAGACAACTGGGT	3450	False	NA	60	True	NA	NA	NA	28531246	28577522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.20	chr2	+	7676	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	8	-2	1	2	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGTGTTGATGGAGTG	3466	False	NA	10	True	AATAAA	-18	NA	28531262	28581181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.21	chr2	+	3992	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	8	3682	1	-1063	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAATATGCCACTCTGC	3466	False	NA	35	True	NA	NA	NA	28531262	28577497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.23	chr2	+	3795	23	NIC	ENSMUSG00000026812.17	novel	7682	23	NA	NA	-1	-1300	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	15.3848696736772	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGTCTGAGCAGCT	3468	False	NA	NA	False	NA	NA	NA	28531264	28577260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.24	chr2	+	4506	21	NNC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	0	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.4688529578431	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAATTGTTGCCTGAT	3469	False	NA	8	True	AATAAA	-10	NA	28531265	28578379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531332_28542180_28542226_28552544_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.25	chr2	+	3706	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1374	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	14.3644993986984	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTCTGTCAGTGTTCAT	3469	False	NA	NA	False	NA	NA	NA	28531265	28577186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.27	chr2	+	4411	24	NNC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	3	-1056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5240273015046	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCACTCTGCTTTCCTG	3472	False	NA	42	True	NA	NA	NA	28531268	28577504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531303_28542180_28542244_28546045_28546478_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.28	chr2	+	8318	2	NNC	ENSMUSG00000026812.17	novel	3640	7	NA	NA	35	-16106	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAATTGAGAAAACCAA	3504	False	NA	NA	False	NA	NA	NA	28531300	28539871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28537975_28538227
ES.18645.29	chr2	+	3804	23	NNC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	48	-1149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.1958700780448	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGGGTCTGTGCTTCAC	3517	False	NA	-51	True	NA	NA	NA	28531313	28577411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575800_28575923_28575996_28576159_28576665
ES.18645.3	chr2	+	4815	22	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	-2	-179	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.838885042843	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGTTGCCTGATAT	3450	False	NA	10	True	AATAAA	-12	NA	28531246	28578381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.30	chr2	+	4251	23	NNC	ENSMUSG00000026812.17	novel	7595	21	NA	NA	88	-1038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5940892595467	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTCAGACAACTGGGT	3557	False	NA	60	True	NA	NA	NA	28531353	28577522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28531657_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.31	chr2	+	3923	22	NNC	ENSMUSG00000026812.17	novel	7682	23	NA	NA	-6400	-1070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3724729685912	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGGGTCCAATATGCC	1902	False	NA	28	True	NA	NA	NA	28542178	28577490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28542249_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.32	chr2	+	2360	8	NIC	ENSMUSG00000026812.17	novel	1711	11	NA	NA	-6399	-214	intron_retention	FALSE	canonical	3	44	junction_5	7.26467550576635	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAAAGAAAATGCTG	1903	False	NA	NA	False	NA	NA	NA	28542179	28562305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28542244_28548616_28548803_28551593_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ES.18645.33	chr2	+	3635	22	ISM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	10931	3986	-6399	-1367	3prime_fragment	FALSE	canonical	3	30	junction_9	10.3964497690535	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTTCATTTGCGTC	1903	False	NA	NA	False	NA	NA	NA	28542179	28577193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.34	chr2	+	5834	1	NIC	ENSMUSG00000026812.17	novel	1711	11	NA	NA	449	-1116	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3942	False	NA	NA	False	NA	NA	NA	28549027	28554861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28549000_28554900
ES.18645.35	chr2	+	3668	19	NNC	ENSMUSG00000026812.17	novel	7595	21	NA	NA	-1338	-1383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.7132224198327	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGAAGAGGGTCTGTC	2596	False	NA	NA	False	NA	NA	NA	28552065	28577177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570038_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.36	chr2	+	5445	2	ISM	ENSMUSG00000026812.17	ENSMUST00000125715.2	703	4	-4887	894	2736	-214	5prime_fragment	FALSE	canonical	3	49	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAAAGAAAATGCTG	246	False	NA	NA	False	NA	NA	NA	28556139	28562305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28561057_28561777
ES.18645.37	chr2	+	2364	9	ISM	ENSMUSG00000026812.17	ENSMUST00000113870.3	7595	21	17431	3689	3720	-1070	3prime_fragment	FALSE	canonical	3	33	junction_2	7.76912961663017	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGGGTCCAATATGCC	3491	False	NA	28	True	NA	NA	NA	28566009	28577490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.4	chr2	+	3719	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	-2	-1367	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTTCATTTGCGTC	3450	False	NA	NA	False	NA	NA	NA	28531246	28577193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.5	chr2	+	4009	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	-1	-1032	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACAACTGGGTGGCTCT	3451	False	NA	66	True	NA	NA	NA	28531247	28577528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.6	chr2	+	3596	20	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	-1	-1058	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.2690801455261	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGCCACTCTGCTTTCC	3451	False	NA	40	True	NA	NA	NA	28531247	28577502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.7	chr2	+	1973	10	ISM	ENSMUSG00000026812.17	ENSMUST00000156857.8	1711	11	10	-93	1	93	intron_retention	FALSE	canonical	3	29	junction_1	12.154357040244	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTAGTTTCTGGGCTTC	3453	False	NA	NA	False	AATAAA	-17	NA	28531249	28562612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777
ES.18645.8	chr2	+	4863	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-173	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGATATTCTGGC	3456	False	NA	16	True	AATAAA	-18	NA	28531252	28578387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18645.9	chr2	+	3657	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	1	-1378	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGGTCTGTCAGTGT	3457	False	NA	NA	False	NA	NA	NA	28531253	28577182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ES.18646.1	chr2	-	671	5	FSM	ENSMUSG00000026809.16	ENSMUST00000102877.8	671	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	6	junction_1	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGGCTTGGTTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	28589665	28582093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28582165_28582923_28583072_28583635_28583839_28585918_28586096_28589593
ES.18646.2	chr2	-	1455	4	FSM	ENSMUSG00000026809.16	ENSMUST00000144209.8	574	4	47	-928	3	0	multi-exon	FALSE	canonical	3	6	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGGCTTGGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	28589692	28582095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28583072_28583635_28583839_28585918_28586096_28589593
ES.18646.3	chr2	-	3504	3	NIC	ENSMUSG00000026809.16	novel	574	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	6	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCTGGCTTGGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	28589662	28582096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28583072_28583635_28586096_28589593
ES.18647.1	chr2	+	178	1	Intergenic	novelGene_15453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	28608447	28608625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28608400_28608600
ES.18648.1	chr2	-	180	1	Intergenic	novelGene_15454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	28686057	28685877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28685900_28686100
ES.18649.1	chr2	-	159	1	Intergenic	novelGene_15455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	5413	False	NA	NA	False	NA	NA	NA	28694320	28694161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28694200_28694300
ES.1865.1	chr1	+	137	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAACAAAC	NA	False	NA	23	True	NA	NA	NA	170881235	170881372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170881200_170881400
ES.18650.1	chr2	+	3330	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-46	-13	7	13	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAAGGGTGCTCAGCGT	NA	False	NA	31	True	AATAAA	-32	NA	28730424	28795596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.10	chr2	+	4557	20	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	13	-353	intron_retention	FALSE	canonical	0	0	junction_11	41.7139048938821	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTCCATATGTTC	NA	False	NA	10	True	GATAAA	-19	NA	28730483	28795230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28748868_28748999_28749107_28749383_28749485_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.11	chr2	+	2694	19	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	153	-354	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	40.148682004104	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTAGTCCATATGTT	NA	False	NA	9	True	GATAAA	-18	NA	28730623	28795229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765706_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.12	chr2	+	5282	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	154	-2165	154	2165	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAATGAGATTAATTTAA	NA	False	NA	NA	False	TTTAAA	-24	NA	28730624	28797748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.13	chr2	+	3593	20	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	155	27664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.5584143772392	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTAGGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	28730625	28823247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28821787
ES.18650.14	chr2	+	2866	21	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	156	-353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	44.484266881674	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTCCATATGTTC	NA	False	NA	10	True	GATAAA	-19	NA	28730626	28795230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735281_28736005_28736050_28736774_28736884_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.15	chr2	+	2827	21	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	190	-355	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	40.6583324793332	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTTAGTCCATATGT	NA	False	NA	8	True	GATAAA	-17	NA	28730660	28795228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749383_28749485_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.16	chr2	+	1745	14	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	214	38139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	47.9444945349622	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTTGCTGTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	28730684	28833722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28833463
ES.18650.17	chr2	+	4208	19	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	215	-356	intron_retention	FALSE	canonical	3	96	junction_10	14.9406232206766	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTTAGTCCATATG	NA	False	NA	7	True	GATAAA	-16	NA	28730685	28795227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.19	chr2	+	6455	17	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	232	-354	intron_retention	FALSE	canonical	3	96	junction_8	15.2887571028518	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTAGTCCATATGTT	NA	False	NA	9	True	GATAAA	-18	NA	28730702	28795229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.2	chr2	+	3817	19	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-17	-354	intron_retention	FALSE	canonical	3	96	junction_9	16.2454172075362	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTAGTCCATATGTT	NA	False	NA	9	True	GATAAA	-18	NA	28730453	28795229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.21	chr2	+	5041	19	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	236	2146	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	32.0603693670335	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTCTCATTCTTA	NA	False	NA	NA	False	TTTAAA	-5	NA	28730706	28797729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.22	chr2	+	2645	20	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	237	-241	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	44.4632500995854	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTGCCTCTCCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	28730707	28795342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28735209_28735286_28736005_28736050_28736774_28736884_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.25	chr2	+	2988	20	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	257	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	30.2260184008025	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGACTCAGCAGAGAA	NA	False	NA	17	True	AATAAA	-18	NA	28730727	28795582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765726_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.26	chr2	+	2872	19	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	258	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	32.0603693670335	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGACTCAGCAGAGAA	NA	False	NA	17	True	AATAAA	-18	NA	28730728	28795582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.27	chr2	+	4851	20	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	272	-1	intron_retention	FALSE	canonical	0	0	junction_5	48.4934812993649	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGACTCAGCAGAGAA	NA	False	NA	17	True	AATAAA	-18	NA	28730742	28795582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28736774_28736884_28737277_28737339_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.28	chr2	+	4091	11	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-294	-2	intron_retention	FALSE	canonical	3	96	junction_1	19.3724030517641	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGGACTCAGCAGAGA	NA	False	NA	16	True	AATAAA	-17	NA	28746858	28795581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.3	chr2	+	5619	15	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-9	9579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	34.604839227472	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGTGGTGGG	NA	False	NA	NA	False	NA	NA	NA	28730461	28759668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28755798
ES.18650.4	chr2	+	4340	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-7	-1062	-7	1062	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTGTTATCTCTGA	NA	False	NA	NA	False	NA	NA	NA	28730463	28796645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.5	chr2	+	2925	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	-6	352	-6	-352	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCCATATGTTCT	NA	False	NA	11	True	GATAAA	-20	NA	28730464	28795231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.6	chr2	+	2688	14	NIC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	37.0055169403654	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGACTCAGCAGAGAA	NA	False	NA	17	True	AATAAA	-18	NA	28730464	28795582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.7	chr2	+	3361	21	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	42.7692646651775	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	18	True	AATAAA	-19	NA	28730464	28795583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28736774_28736884_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765726_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.8	chr2	+	2894	20	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	-2	-354	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	30.2260184008025	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTAGTCCATATGTT	NA	False	NA	9	True	GATAAA	-18	NA	28730468	28795229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765726_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18650.9	chr2	+	3349	21	NNC	ENSMUSG00000026806.16	novel	3271	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.7367467142122	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACTCAGCAGAGAAAGG	NA	False	NA	20	True	AATAAA	-21	NA	28730470	28795585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749383_28749485_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765726_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ES.18651.1	chr2	+	204	1	Intergenic	novelGene_15458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	28925434	28925638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28925400_28925600
ES.18652.1	chr2	+	179	1	Intergenic	novelGene_15459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTTCCAGAA	NA	False	NA	NA	False	NA	NA	NA	28937208	28937387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28937200_28937400
ES.18653.1	chr2	+	178	1	Intergenic	novelGene_15460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	28939883	28940061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28939900_28940100
ES.18654.1	chr2	-	7342	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-392	-9	-318	3	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTTATTCTTACC	NA	False	NA	4	True	AATAAA	-28	NA	28730690	28712307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.10	chr2	-	7416	4	NNC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.973375937751	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCAAAGGGGATTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	28730357	28712319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28716810_28717489_28717579_28723561_28725386_28729344
ES.18654.11	chr2	-	1024	2	NNC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	16899	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCAAAGGGGATTTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	28713399	28712319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28712887_28712942
ES.18654.13	chr2	-	5215	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	19	1893	11	-1887	multi-exon	FALSE	canonical	2	8	junction_4	103.395551161547	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGTTTGTTTTGTT	NA	False	NA	NA	False	AATGAA	-18	NA	28730353	28714203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
ES.18654.14	chr2	-	5081	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-28	1888	-28	-1888	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTGTTTGTTTTGT	NA	False	NA	NA	False	AATGAA	-17	NA	28730326	28714204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.15	chr2	-	5157	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	-4	-1891	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTCTGTTTGTTT	NA	False	NA	NA	False	AATGAA	-14	NA	28730302	28714207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
ES.18654.16	chr2	-	5305	7	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	17	-1894	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	102.107378120617	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTGTTTTCTGTTTG	NA	False	NA	NA	False	AATGAA	-11	NA	28730347	28714210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28726422_28726529_28729894
ES.18654.17	chr2	-	4205	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	1	2735	1	-2735	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCATTTCTGTGAAAT	NA	False	NA	NA	False	TTTAAA	-3	NA	28730297	28715051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.18	chr2	-	3837	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	24	3266	16	-3260	multi-exon	FALSE	canonical	2	8	junction_4	103.395551161547	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTTTATCATGAGT	NA	False	NA	2	True	AATACA	-27	NA	28730348	28715576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
ES.18654.2	chr2	-	8460	2	ISM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	8850	-8	8850	2	intron_retention	FALSE	canonical	3	207	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTTTTTATTCTTAC	NA	False	NA	3	True	AATAAA	-27	NA	28721448	28712308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_28716810_28717489
ES.18654.20	chr2	-	3724	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-45	3262	21	-3262	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTCTGTTTTATCATGA	NA	False	NA	0	True	AATACA	-25	NA	28730343	28715578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.21	chr2	-	3806	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	-24	-3262	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTCTGTTTTATCATGA	NA	False	NA	0	True	AATACA	-25	NA	28730322	28715578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
ES.18654.22	chr2	-	4294	7	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	-333	-3263	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	102.107378120617	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTCTGTTTTATCATG	NA	False	NA	-1	True	AATACA	-24	NA	28730705	28715579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28726422_28726529_28729894
ES.18654.23	chr2	-	3865	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-562	3638	-488	-3638	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGCTTATCCGGACAT	NA	False	NA	NA	False	ATTAAA	-21	NA	28730860	28715954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.24	chr2	-	3808	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	-673	3806	-599	-3806	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTGTCATCAGATTTT	NA	False	NA	41	True	AGTAAA	-19	NA	28730971	28716122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ES.18654.25	chr2	-	3236	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	25	-3849	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAGGTGACTATTAGAA	NA	False	NA	-2	True	AATAAA	-20	NA	28730339	28716165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
ES.18654.26	chr2	-	2766	5	NNC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	873	-3852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.9458611803516	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATCAGGTGACTATTA	NA	False	NA	-5	True	AATAAA	-17	NA	28729425	28716168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729344
ES.18654.3	chr2	-	7205	7	NNC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	102.692096417722	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	1	True	AATAAA	-25	NA	28730351	28712310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726136_28726422_28726529_28729894
ES.18654.4	chr2	-	7431	6	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	-310	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGGATTTTTTTTTATT	NA	False	NA	-2	True	AATAAA	-22	NA	28730682	28712313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
ES.18654.5	chr2	-	7098	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	23	6	15	0	multi-exon	FALSE	canonical	2	8	junction_4	103.395551161547	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730349	28712316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
ES.18654.6	chr2	-	6937	5	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	79.4606821012757	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730322	28712316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28726036_28726140_28729894
ES.18654.7	chr2	-	6869	4	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	89.7416043736435	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730357	28712316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28729894
ES.18654.8	chr2	-	5145	4	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	102.353418224416	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAGGGGATTTTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	28730327	28712317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28729894
ES.18654.9	chr2	-	6950	5	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	31	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	85.1039805179523	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAGGGGATTTTTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	28730333	28712317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28726422_28726529_28729894
ES.18655.1	chr2	-	2910	6	Fusion	ENSMUSG00000079502.9_ENSMUSG00000026805.15	novel	2160	5	NA	NA	-40416	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	195	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGCGGTGGTGTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	28847096	28797695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_28799935_28801353_28801577_28805225_28805396_28806321_28806360_28846006_28846109_28846958
ES.18655.2	chr2	-	5474	1	Intergenic	novelGene_15456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTTCTCCTTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	28816395	28810921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28810900_28816400
ES.18655.3	chr2	-	1281	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	-73	-208	-73	208	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTTAGCTGGGCATG	NA	False	NA	NA	False	AATAAA	-42	NA	28824694	28823413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28823400_28824700
ES.18655.4	chr2	-	6578	2	NNC	ENSMUSG00000079502.9	novel	1042	6	NA	NA	82273	5710	intron_retention	FALSE	canonical	1	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACCAGGTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	28847099	28839671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_28846109_28846958
ES.18655.5	chr2	-	7287	5	ISM	ENSMUSG00000079502.9	ENSMUST00000189711.7	1759	6	-192	22707	-165	5710	5prime_fragment	FALSE	canonical	1	3	junction_3	1.4142135623731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACCAGGTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	28945243	28839671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_28846109_28852643_28852750_28874307_28874534_28875813_28875914_28944825
ES.18655.6	chr2	-	4116	5	ISM	ENSMUSG00000079502.9	ENSMUST00000189711.7	1759	6	-16	25702	4	2715	5prime_fragment	FALSE	canonical	1	3	junction_3	1.4142135623731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATAGAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28945067	28842666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_28846109_28852643_28852750_28874307_28874534_28875813_28875914_28944825
ES.18655.7	chr2	-	1414	6	FSM	ENSMUSG00000079502.9	ENSMUST00000157048.4	1042	6	-180	-192	-180	192	multi-exon	FALSE	canonical	1	3	junction_4	3.07245829914744	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCTGGCTTTAGAGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	28945258	28845189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_28845637_28846006_28846109_28852643_28852750_28874307_28874534_28875813_28875914_28944825
ES.18655.8	chr2	-	159	1	Intergenic	novelGene_15457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	28919188	28919029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_28919000_28919200
ES.18656.1	chr2	+	182	1	Intergenic	novelGene_15461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGGGACTGA	NA	False	NA	NA	False	NA	NA	NA	28949260	28949442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28949300_28949400
ES.18657.1	chr2	+	4002	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950218	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.10	chr2	+	3928	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.2726645334669	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATGTGTGTGAAATG	NA	False	NA	14	True	AATAAA	-16	NA	28950290	28977661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957002_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.11	chr2	+	3920	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	20.8704669063461	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	18	True	AATAAA	-20	NA	28950290	28977665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.12	chr2	+	8238	12	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	13	0	intron_retention	FALSE	canonical	3	18	junction_6	20.6593784358429	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950290	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.14	chr2	+	4028	14	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.6773628546519	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	18	True	AATAAA	-20	NA	28950293	28977665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28960736_28960841_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.15	chr2	+	4210	13	NNC	ENSMUSG00000026803.18	novel	723	3	NA	NA	333	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0762979299184	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAAATGTGTGTGAAAT	NA	False	NA	13	True	AATAAA	-15	NA	28950610	28977660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950920_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973635_28974648_28974827_28976118_28976918_28977130
ES.18657.16	chr2	+	5669	12	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	2585	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.1160290644628	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28952862	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977127
ES.18657.17	chr2	+	4562	10	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	3528	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.5782507920352	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTGTGTGAAATGAC	NA	False	NA	16	True	AATAAA	-18	NA	28953805	28977663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.18	chr2	+	3672	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	4510	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.362283007414	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28954787	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28954828_28954903_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.19	chr2	+	2592	7	NNC	ENSMUSG00000026803.18	novel	5336	11	NA	NA	-801	-7	intron_retention	FALSE	canonical	3	18	junction_1	27.6043474836845	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATGTGTGTGAAATG	NA	False	NA	14	True	AATAAA	-16	NA	28963971	28977661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.2	chr2	+	3704	14	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	24.145760528078	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGTGAAATGACTT	NA	False	NA	18	True	AATAAA	-20	NA	28950268	28977665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976393_28976637_28976918_28977130
ES.18657.20	chr2	+	9640	6	NNC	ENSMUSG00000026803.18	novel	266	2	NA	NA	160	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	40.102867727882	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTGTGTGAAATGAC	NA	False	NA	16	True	AATAAA	-18	NA	28964932	28977663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28967387_28967787_28972946_28973112_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.21	chr2	+	135	1	Intergenic	novelGene_15462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	28966034	28966169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28966000_28966200
ES.18657.22	chr2	+	4233	4	NNC	ENSMUSG00000026803.18	novel	5336	11	NA	NA	-2515	-7	intron_retention	FALSE	canonical	3	71	junction_1	7.48331477354788	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATGTGTGTGAAATG	NA	False	NA	14	True	AATAAA	-16	NA	28970905	28977661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.3	chr2	+	4500	12	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_1	12.1308295179426	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950274	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.6	chr2	+	3780	11	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.8306262506607	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950284	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.7	chr2	+	3895	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.6104099158952	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTGTGTGAAATGAC	NA	False	NA	16	True	AATAAA	-18	NA	28950288	28977663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973569_28973631_28974648_28974827_28976118_28976918_28977130
ES.18657.8	chr2	+	8246	12	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	70	junction_5	9.26826987340577	136	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950289	28977668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
ES.18658.1	chr2	+	166	1	Intergenic	novelGene_15463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	28991744	28991910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_28991700_28991900
ES.18659.1	chr2	+	10834	29	NNC	ENSMUSG00000043535.14	novel	1141	9	NA	NA	-11028	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.24567892014	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAAGTACTCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	29003164	29072485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29003210_29013519_29013662_29014780_29014849_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.10	chr2	+	11084	27	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	49	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	77.2148696474621	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGGGTTAGAAGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	29015052	29072481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.11	chr2	+	10891	26	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	129	-3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	87.3293902417737	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015132	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.12	chr2	+	10891	27	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.4543028163151	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGGTTAGAAGTACTC	NA	False	NA	NA	False	AATAAA	-17	NA	29015132	29072482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29026667_29026719_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.13	chr2	+	3949	5	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	141	8325	intron_retention	TRUE	canonical	0	0	junction_4	84.2062200790417	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTAAAAAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	29015144	29028786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015976_29016885_29017076_29020191_29020403_29023933_29025236_29027371
ES.18659.14	chr2	+	9644	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	142	-1072	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTGAGTTTCCTGATC	NA	False	NA	NA	False	NA	NA	NA	29015145	29071411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.16	chr2	+	10870	27	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	155	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	109.642621447455	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015158	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29026667_29026719_29029231_29029452_29030280_29030401_29033901_29034069_29034182_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051590_29051761_29051878_29052989_29053062_29054413_29054564_29056278_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.17	chr2	+	10458	26	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	73.3858405961259	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGGGTTAGAAGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	29015160	29072481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015209_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.18	chr2	+	10548	26	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	164	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	85.7545334078613	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015167	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015306_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056278_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.19	chr2	+	10673	26	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	168	-28	at_least_one_novel_splicesite	TRUE	canonical	1	11	junction_8	71.3591031333775	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAGAAATAAAAACAAACAA	NA	False	NA	NA	False	AGTAAA	-41	NA	29015171	29072455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29033973_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.2	chr2	+	906	2	NNC	ENSMUSG00000043535.14	novel	525	5	NA	NA	-2949	-5901	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAATGTTAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	29011243	29014356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29011313_29013519
ES.18659.20	chr2	+	8576	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	170	2224	170	707	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGTTTGTTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	29015173	29070259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.21	chr2	+	10466	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	170	-222	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAACATGTGAATAAT	NA	False	NA	NA	False	AGTAAA	-5	NA	29015173	29072261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.22	chr2	+	10917	27	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	170	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.8372368504087	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	29015173	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015887_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.23	chr2	+	10834	27	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	170	-131	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	77.2148696474621	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTAGCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	29015173	29072352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.24	chr2	+	7134	21	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	170	11270	170	-8339	5prime_fragment	FALSE	canonical	3	142	junction_8	58.6468242959497	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTCTGCAAGCTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	29015173	29061213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174
ES.18659.26	chr2	+	10666	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	182	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	74.4078008903188	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGGGTTAGAAGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	29015185	29072481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.27	chr2	+	10556	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	191	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	74.4135287692291	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015194	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.28	chr2	+	1639	4	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	193	51320	193	702	5prime_fragment	FALSE	canonical	3	157	junction_1	22.939534045447	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGACTTAATAC	NA	False	NA	NA	False	NA	NA	NA	29015196	29021163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191
ES.18659.29	chr2	+	10472	24	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	193	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.7024320815546	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015196	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.3	chr2	+	1522	1	Genic_Genomic	ENSMUSG00000043535.14	novel	NA	NA	NA	NA	-1394	-5937	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	29012798	29014320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_29012800_29014300
ES.18659.30	chr2	+	10749	26	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	195	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2765290100389	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015198	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015887_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034188_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.31	chr2	+	11617	25	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	196	-3	intron_retention	FALSE	canonical	1	1	junction_16	85.4128454429816	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015199	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29052836_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.33	chr2	+	10709	27	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	215	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.7612191847539	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29015218	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015422_29015464_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.34	chr2	+	8350	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	284	707	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGTTTGTTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	29015287	29070259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.35	chr2	+	1665	9	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	338	14487	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	54.1548705104167	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGAGTTCTCAGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	29015341	29034948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614
ES.18659.36	chr2	+	10345	24	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	382	-11	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	86.222401134896	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAAACTGGCCTGGGTT	NA	False	NA	NA	False	AATAAA	-7	NA	29015385	29072472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.37	chr2	+	9004	21	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	387	6248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	76.122664167776	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTACTCTTAACCATTAT	NA	False	NA	NA	False	NA	NA	NA	29015390	29059022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29057604_29058112
ES.18659.38	chr2	+	178	1	Intergenic	novelGene_15464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	29018266	29018444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29018300_29018400
ES.18659.39	chr2	+	2844	1	Intergenic	novelGene_15465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTAAAAAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	29025942	29028786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29025900_29028800
ES.18659.4	chr2	+	10651	27	NIC	ENSMUSG00000043535.14	novel	1141	9	NA	NA	-66	16	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	84.1903661441099	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGCTGCTAGGTTAAG	NA	False	NA	NA	False	AATAAA	-34	NA	29014126	29072499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29014282_29014780_29014849_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.40	chr2	+	9409	19	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	14419	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	80.1809681552985	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	29030316	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.41	chr2	+	5747	21	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	14446	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.3441386093261	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGGGTTAGAAGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	29030343	29072480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29030401_29033901_29034074_29034189_29034278_29034614_29034690_29038445_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.42	chr2	+	1071	4	ISM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	15373	37082	14479	14940	internal_fragment	FALSE	canonical	3	142	junction_2	13.6381816969859	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAACATTTATTGT	NA	False	NA	NA	False	GATAAA	-14	NA	29030376	29035401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29030401_29033901_29034074_29034189_29034278_29034614
ES.18659.43	chr2	+	9483	20	NNC	ENSMUSG00000043535.14	novel	1141	9	NA	NA	-14615	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.2380002818844	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGGCCTGGGTTAG	NA	False	NA	NA	False	AATAAA	-9	NA	29032612	29072474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29032656_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.44	chr2	+	7551	18	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-10884	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	94.5962829470844	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	29036343	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063138_29063254_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.45	chr2	+	7534	17	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-10884	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	71.4269458520382	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29036343	29072483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062253_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.46	chr2	+	7218	18	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-10536	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	100.489528453067	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29036691	29072483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051527_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.47	chr2	+	5952	17	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-9411	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	96.4606258726844	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAGAAATAAAAACAAACAA	NA	False	NA	NA	False	AGTAAA	-41	NA	29037816	29072455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052991_29053062_29054413_29054568_29056288_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.48	chr2	+	5948	17	NNC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-9342	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	72.0163826847753	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29037885	29072483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29038734_29040019_29040120_29043949_29044109_29046999_29047263_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.5	chr2	+	10599	27	NNC	ENSMUSG00000043535.14	novel	1141	9	NA	NA	-37	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.128673105445	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	29014155	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29014282_29014754_29014849_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069420
ES.18659.50	chr2	+	4106	9	FSM	ENSMUSG00000043535.14	ENSMUST00000145422.2	1141	9	-58	-2907	-58	-24	multi-exon	FALSE	canonical	3	32	junction_5	108.471194332873	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	False	NA	NA	False	AGTAAA	-45	NA	29054411	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
ES.18659.51	chr2	+	166	1	Intergenic	novelGene_15468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29057769	29057935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29057800_29057900
ES.18659.52	chr2	+	7313	4	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	7217	0	intron_retention	FALSE	canonical	3	270	junction_1	11.0855260988773	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	1423	False	NA	NA	False	AATAAA	-18	NA	29061686	29072483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29062421_29063568_29066988_29067526_29067615_29069411
ES.18659.53	chr2	+	4760	1	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	13230	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	1614	False	NA	NA	False	AGTAAA	-45	NA	29067699	29072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29067700_29072500
ES.18659.6	chr2	+	10819	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	-13	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	75.882024203511	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCCTGGGTTAGAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	29014990	29072478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.7	chr2	+	10980	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	-8	-2	-8	2	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAAGTACTCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	29014995	29072485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.8	chr2	+	10848	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29015013	29072483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.18659.9	chr2	+	10809	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	30	131	30	-131	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTAGCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	29015033	29072352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ES.1866.1	chr1	+	233	1	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAATCCCAGCACTCG	NA	False	NA	NA	False	AAAACA	-31	NA	170884328	170884561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170884300_170884600
ES.18660.1	chr2	-	174	1	Intergenic	novelGene_15466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTCCTTGTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	29028016	29027842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29027800_29028000
ES.18661.1	chr2	-	10130	2	Antisense	novelGene_ENSMUSG00000043535.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29055446	29044741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29048276_29048850
ES.18661.2	chr2	-	5553	2	Antisense	novelGene_ENSMUSG00000043535.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAATTCCATCCTGCAA	NA	False	NA	NA	False	NA	NA	NA	29055446	29045223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29045512_29050181
ES.18661.3	chr2	-	168	1	Intergenic	novelGene_15467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	8753	False	NA	NA	False	NA	NA	NA	29046312	29046144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29046100_29046300
ES.18661.4	chr2	-	5367	2	Antisense	novelGene_ENSMUSG00000043535.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGTACCACCTCAACAGA	NA	False	NA	NA	False	NA	NA	NA	29055446	29049903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29051586_29051761
ES.18662.1	chr2	-	1657	6	ISM	ENSMUSG00000035513.20	ENSMUST00000102873.8	1593	7	20383	-841	20383	561	3prime_fragment	FALSE	canonical	0	0	junction_2	1.54919333848297	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTGCTTGCTTCC	7151	False	NA	-3	True	AGTAAA	-15	NA	29117669	29083991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29085066_29085658_29085794_29086993_29087162_29094909_29094937_29097429_29097603_29117589
ES.18662.2	chr2	-	1324	2	NNC	ENSMUSG00000035513.20	novel	1957	6	NA	NA	8482	561	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTGCTTGCTTCC	NA	False	NA	-3	True	AGTAAA	-15	NA	29085554	29083991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29085066_29085304
ES.18663.1	chr2	-	4093	3	NNC	ENSMUSG00000079499.10	novel	4301	2	NA	NA	-18	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAAAATGAATAGGGA	NA	False	NA	NA	False	AATAAA	-25	NA	29143036	29135128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29138527_29138755_29138891_29142476
ES.18663.2	chr2	-	3897	2	NIC	ENSMUSG00000079499.10	novel	4301	2	NA	NA	-81	-13	intron_retention	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCACAAGGAAAATGAATAG	NA	False	NA	NA	False	AATAAA	-22	NA	29143099	29135131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29138891_29142961
ES.18663.3	chr2	-	4002	3	NNC	ENSMUSG00000079499.10	novel	4301	2	NA	NA	-2	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACGCACAAGGAAAATGAA	NA	False	NA	NA	False	AATAAA	-19	NA	29143020	29135134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29138527_29138824_29138891_29142476
ES.18664.1	chr2	+	3231	5	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	-8	21951	-8	2294	5prime_fragment	FALSE	canonical	3	144	junction_3	13.5738719604982	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTACACATTTTCTCACA	NA	False	NA	NA	False	NA	NA	NA	29236822	29392854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230
ES.18664.10	chr2	+	1050	7	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-5861	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7140269146043	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGCTCTGTGTTCTGC	NA	False	NA	27	True	AATAAA	-15	NA	29275494	29414800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29275670_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ES.18664.11	chr2	+	4533	1	Intergenic	novelGene_15471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	29317384	29321917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29317400_29321900
ES.18664.12	chr2	+	181	1	Intergenic	novelGene_15472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	29332032	29332213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29332000_29332200
ES.18664.13	chr2	+	857	6	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-34402	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9844427636972	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAAGGCTCTGTGTTCTG	5298	False	NA	26	True	AATAAA	-14	NA	29352120	29414799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29352235_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ES.18664.14	chr2	+	2705	1	Genic_Genomic	ENSMUSG00000026799.16	novel	NA	NA	NA	NA	-1204	-3087	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCAATGCTTGCCTTTG	NA	False	NA	NA	False	NA	NA	NA	29393678	29396383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_29393700_29396400
ES.18664.15	chr2	+	3361	2	ISM	ENSMUSG00000026799.16	ENSMUST00000147547.2	581	4	15040	-105	15040	-7	3prime_fragment	FALSE	canonical	3	194	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAAGGCTCTGTGTTCT	NA	False	NA	25	True	AATAAA	-13	NA	29409922	29414798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29412864_29414378
ES.18664.2	chr2	+	1256	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	-6	4	-6	-4	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGCTCTGTGTTCTGCT	NA	False	NA	28	True	AATAAA	-16	NA	29236824	29414801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ES.18664.3	chr2	+	1130	9	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1957902257543	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAAGGCTCTGTGTTCT	NA	False	NA	25	True	AATAAA	-13	NA	29236825	29414798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29236885_29237006_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ES.18664.5	chr2	+	1224	8	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	-4	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.4534833206784	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCTGGACAAGGCTCTG	NA	False	NA	19	True	AATAAA	-7	NA	29236840	29414792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399441_29399477_29412785_29412864_29414378
ES.18664.7	chr2	+	677	6	NNC	ENSMUSG00000026799.16	novel	1686	5	NA	NA	5	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.7842623878653	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCCAAACTCTTCAAT	NA	False	NA	NA	False	TTTAAA	-38	NA	29236849	29367563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29236885_29237006_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29367344
ES.18664.8	chr2	+	3063	6	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	8	2278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.6975627330851	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGGAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	29236852	29392838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29236885_29237006_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230
ES.18664.9	chr2	+	976	7	NNC	ENSMUSG00000026799.16	novel	1254	8	NA	NA	14114	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7140269146043	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGCTCTGTGTTCTGC	NA	False	NA	27	True	AATAAA	-15	NA	29250958	29414800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29251060_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ES.18665.1	chr2	+	175	1	Intergenic	novelGene_15473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTATAAGATGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	29422482	29422657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29422500_29422700
ES.18666.1	chr2	-	2858	1	Intergenic	novelGene_15469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAAGGCTGCAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	29255768	29252910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29252900_29255800
ES.18667.1	chr2	-	178	1	Intergenic	novelGene_15470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	29280136	29279958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29280000_29280100
ES.18667.2	chr2	-	175	2	Antisense	novelGene_ENSMUSG00000082413.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	29471845	29279959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29280080_29471790
ES.18667.3	chr2	-	6050	1	Antisense	novelGene_ENSMUSG00000026799.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGCTCAAGAGAAAAGC	NA	False	NA	NA	False	AATACA	-39	NA	29402873	29396823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29396800_29402900
ES.18667.4	chr2	-	203	1	Intergenic	novelGene_15474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTTGGCAGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	29447075	29446872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29446900_29447100
ES.18667.5	chr2	-	156	1	Intergenic	novelGene_15475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	29451318	29451162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29451200_29451300
ES.18667.6	chr2	-	177	1	Intergenic	novelGene_15476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTACAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	29471845	29471668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29471700_29471800
ES.18668.1	chr2	+	5860	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-72	614	-22	1	multi-exon	TRUE	canonical	3	225	junction_2	42.1435569818812	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509709	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.15	chr2	+	5805	24	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_15	81.0070593670501	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGCCATGTCTGTGT	NA	False	NA	7	True	AATAAA	-14	NA	29509748	29630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620627_29622845_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.16	chr2	+	6134	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-4	-50	intron_retention	FALSE	canonical	1	2	junction_1	78.6068606977332	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29509748	29630940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.17	chr2	+	5570	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-4	1	intron_retention	FALSE	canonical	1	2	junction_1	78.6068606977332	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509748	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.18	chr2	+	5788	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-2	4	intron_retention	FALSE	canonical	2	4	junction_4	79.8296390229885	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCATGTCTGTGTCCAG	NA	False	NA	11	True	AATAAA	-18	NA	29509750	29630369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579142_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.19	chr2	+	3600	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	1	-65	combination_of_known_junctions	FALSE	canonical	3	94	junction_2	58.96679272801	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCCTGGTCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	29509753	29628274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.20	chr2	+	5810	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	3	3	intron_retention	FALSE	non_canonical	0	0	junction_2	102.918067142866	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509755	29630368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569732_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624448_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.22	chr2	+	3705	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	4	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	81.2981164782503	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGGTGGCCCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	29509756	29628267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590678_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.24	chr2	+	2180	10	ISM	ENSMUSG00000039844.21	ENSMUST00000095087.11	6241	26	28	37431	7	-31303	5prime_fragment	FALSE	canonical	3	225	junction_2	60.4509800388242	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAACCCATTTCCTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	29509759	29592934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204
ES.18668.25	chr2	+	4945	12	ISM	ENSMUSG00000039844.21	ENSMUST00000095087.11	6241	26	28	27395	7	-21267	5prime_fragment	FALSE	canonical	3	6	junction_11	109.379542408627	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAATGTAGCCTGGTTGT	NA	False	NA	NA	False	AAAACA	-21	NA	29509759	29602970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164
ES.18668.26	chr2	+	2495	10	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	8	-31501	intron_retention	FALSE	canonical	0	0	junction_9	162.165515202794	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTCTGCTTAGCCCA	NA	False	NA	NA	False	NA	NA	NA	29509760	29592736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569863_29576116_29576296_29579142_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29591132_29591204_29592204
ES.18668.27	chr2	+	5708	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	8	1	intron_retention	FALSE	non_canonical	0	0	junction_4	81.4724133202853	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGCCATGTCTGTGTC	NA	False	NA	8	True	AATAAA	-15	NA	29509760	29630366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576353_29588999_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.28	chr2	+	5667	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	91.3901024534182	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTGTCCAGGCCTT	NA	False	NA	16	True	AATAAA	-23	NA	29509760	29630374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576275_29579123_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.3	chr2	+	5745	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-21	1	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509710	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.30	chr2	+	5668	25	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	9	-4	intron_retention	FALSE	canonical	1	2	junction_10	79.3005775339766	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	NA	False	NA	13	True	AATAAA	-20	NA	29509761	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592491_29592625_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.31	chr2	+	3737	11	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	9	1	intron_retention	FALSE	non_canonical	0	0	junction_2	141.042865824543	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509761	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29623058_29623126_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.32	chr2	+	6350	22	NIC	ENSMUSG00000039844.21	novel	6212	26	NA	NA	9	0	intron_retention	FALSE	canonical	3	94	junction_2	60.3437244406167	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509761	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29627468_29627931
ES.18668.34	chr2	+	5960	25	NIC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	10	1	intron_retention	FALSE	canonical	1	2	junction_11	101.174766287515	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509762	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600167_29600321_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.35	chr2	+	5476	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_9	94.0865380593362	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGATGCCATGTCTGTG	NA	False	NA	6	True	AATAAA	-13	NA	29509764	29630364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.36	chr2	+	5370	21	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	12	-4	intron_retention	FALSE	canonical	0	0	junction_1	80.3037203372297	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	NA	False	NA	13	True	AATAAA	-20	NA	29509764	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.37	chr2	+	8179	21	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	12	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	87.0841403471378	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	NA	False	NA	15	True	AATAAA	-22	NA	29509764	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590678_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29624297_29624436_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.38	chr2	+	5659	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	12	3	intron_retention	FALSE	canonical	2	4	junction_3	90.7498719348868	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509764	29630368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579142_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.4	chr2	+	5892	24	NIC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	6	junction_10	109.733239006744	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	NA	False	NA	15	True	AATAAA	-22	NA	29509716	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164_29600321_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.41	chr2	+	6256	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	14	-3	intron_retention	FALSE	canonical	3	232	junction_2	34.904592513198	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTGATGCCATGTCTG	NA	False	NA	4	True	AATAAA	-11	NA	29509766	29630362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.42	chr2	+	5550	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-11	1	intron_retention	FALSE	canonical	1	2	junction_9	89.8583215868853	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509770	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592491_29592625_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.43	chr2	+	5004	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-10	1408	-10	595	multi-exon	FALSE	canonical	3	225	junction_2	42.1435569818812	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCTTGTGAGCAGTC	NA	False	NA	NA	False	NA	NA	NA	29509771	29629582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.44	chr2	+	5709	26	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-10	3	intron_retention	FALSE	canonical	0	0	junction_2	117.670971781489	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509771	29630368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29551143_29551198_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592491_29592625_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.45	chr2	+	4008	5	ISM	ENSMUSG00000039844.21	ENSMUST00000095087.11	6241	26	42	47971	-8	-41843	5prime_fragment	FALSE	canonical	3	225	junction_2	65.7742350772702	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAATGCTTTCTTCCAC	NA	False	NA	NA	False	NA	NA	NA	29509773	29582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118
ES.18668.46	chr2	+	5767	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	104.667842615976	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	NA	False	NA	15	True	AATAAA	-22	NA	29509776	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597390_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620624_29622837_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.47	chr2	+	5876	25	NIC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_12	102.816170569398	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGATGCCATGTCTGT	NA	False	NA	5	True	AATAAA	-12	NA	29509776	29630363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29610654_29610751_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.48	chr2	+	4105	15	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_2	91.5479410484151	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTGTCCAGGCCTT	NA	False	NA	16	True	AATAAA	-23	NA	29509776	29630374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.5	chr2	+	6303	23	ISM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-51	614	-1	1	intron_retention	FALSE	canonical	3	225	junction_2	43.0907172991512	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509730	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338
ES.18668.50	chr2	+	3545	14	ISM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-4	13547	-4	-6794	5prime_fragment	FALSE	canonical	3	225	junction_2	52.6120106880459	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTTCTGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-41	NA	29509777	29617443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217
ES.18668.52	chr2	+	1977	2	ISM	ENSMUSG00000039844.21	ENSMUST00000147755.10	3908	25	-143	57515	-3	-53413	5prime_fragment	FALSE	canonical	3	328	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	29509778	29570824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29510076_29569144
ES.18668.53	chr2	+	6162	22	NIC	ENSMUSG00000039844.21	novel	6212	26	NA	NA	-3	0	intron_retention	FALSE	canonical	3	94	junction_2	59.5082265316596	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509778	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626682_29627338_29627468_29627931
ES.18668.56	chr2	+	5779	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-2	3	intron_retention	FALSE	non_canonical	0	0	junction_15	81.0070593670501	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509779	29630368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620619_29622835_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.57	chr2	+	5492	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_2	78.3779725175621	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	NA	False	NA	13	True	AATAAA	-20	NA	29509779	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.59	chr2	+	5794	24	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	78.4176690093147	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGCCATGTCTGTGT	NA	False	NA	7	True	AATAAA	-14	NA	29509780	29630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569732_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.6	chr2	+	5888	25	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	102.720215675072	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509734	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29551143_29551198_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.60	chr2	+	5648	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_16	92.1977303820615	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509780	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624238_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.62	chr2	+	5541	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_21	94.1890557936139	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	NA	False	NA	13	True	AATAAA	-20	NA	29509780	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627931
ES.18668.64	chr2	+	6404	24	NIC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	1	-2	intron_retention	FALSE	canonical	3	6	junction_11	102.678679155505	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	NA	False	NA	15	True	AATAAA	-22	NA	29509782	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164_29600321_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338
ES.18668.65	chr2	+	5736	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_9	110.24555853096	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCATGTCTGTGTCCA	NA	False	NA	10	True	AATAAA	-17	NA	29509782	29630368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29591132_29591204_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.66	chr2	+	5453	21	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	3	-50	intron_retention	FALSE	non_canonical	0	0	junction_8	94.9034245957436	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29509784	29630940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590766_29612230_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.68	chr2	+	4804	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	11	530	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCCTTGGTCAGCTCCC	NA	False	NA	NA	False	AATAGA	-18	NA	29509792	29629517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.69	chr2	+	6428	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	17	1	intron_retention	FALSE	canonical	3	225	junction_2	42.9134242804169	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29509798	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.7	chr2	+	6471	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	-39	-30	-10	30	multi-exon	FALSE	canonical	3	225	junction_2	42.1435569818812	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTTATGAGTTGATACA	NA	False	NA	NA	False	ATTAAA	-36	NA	29509742	29631020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.70	chr2	+	5400	21	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	26	0	intron_retention	FALSE	canonical	1	8	junction_13	94.9702058542573	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGCCATGTCTGTGT	NA	False	NA	7	True	AATAAA	-14	NA	29509807	29630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29623647_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.71	chr2	+	6254	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	38	4	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACCATAGCAATAGAATT	NA	False	NA	NA	False	ATTAAA	-10	NA	29509819	29630994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.72	chr2	+	5759	24	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	43	-5	intron_retention	FALSE	canonical	0	0	junction_1	81.3546229122055	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGTCTGTGTCCAGG	NA	False	NA	12	True	AATAAA	-19	NA	29509824	29630370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569124_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.73	chr2	+	11209	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	46	-50	intron_retention	FALSE	canonical	3	225	junction_2	43.880015751056	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29509827	29630940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29620625_29622838_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.74	chr2	+	5554	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	46	1	intron_retention	FALSE	canonical	0	0	junction_14	84.757865072275	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGCCATGTCTGTGTC	NA	False	NA	8	True	AATAAA	-15	NA	29509827	29630366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.76	chr2	+	5942	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	47	-5	intron_retention	FALSE	canonical	0	0	junction_15	82.8263143397522	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGTCTGTGTCCAGG	NA	False	NA	12	True	AATAAA	-19	NA	29509828	29630370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620773_29623436_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.78	chr2	+	2882	12	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	47	-23258	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	110.376890023409	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGGGGACAACCCTTA	NA	False	NA	NA	False	NA	NA	NA	29509828	29600979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600167
ES.18668.81	chr2	+	5654	23	NNC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	-65	-5	intron_retention	FALSE	canonical	0	0	junction_18	92.1062537696061	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGTCTGTGTCCAGG	NA	False	NA	12	True	AATAAA	-19	NA	29509856	29630370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625752_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.82	chr2	+	4327	4	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	0	-41843	intron_retention	FALSE	canonical	3	232	junction_2	61.6675675609869	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAATGCTTTCTTCCAC	NA	False	NA	NA	False	NA	NA	NA	29509921	29582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29510076_29569144_29569863_29576116_29576296_29579118
ES.18668.83	chr2	+	4716	1	Intergenic	novelGene_15477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	29522449	29527165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29522400_29527200
ES.18668.84	chr2	+	5777	24	FSM	ENSMUSG00000039844.21	ENSMUST00000238899.2	4205	24	-184	-1388	-184	0	multi-exon	FALSE	canonical	2	7	junction_1	80.1360138660296	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29533642	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29533927_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.85	chr2	+	6999	21	NIC	ENSMUSG00000039844.21	novel	4205	24	NA	NA	-174	-2	intron_retention	FALSE	canonical	2	7	junction_1	85.3693592572886	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	NA	False	NA	15	True	AATAAA	-22	NA	29533652	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29533927_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.86	chr2	+	5730	24	NNC	ENSMUSG00000039844.21	novel	4205	24	NA	NA	-141	0	intron_retention	FALSE	non_canonical	0	0	junction_14	104.203759243387	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGCCATGTCTGTGT	NA	False	NA	7	True	AATAAA	-14	NA	29533685	29630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29533927_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616300_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.87	chr2	+	5886	25	NIC	ENSMUSG00000039844.21	novel	4205	24	NA	NA	-139	1	intron_retention	FALSE	canonical	1	2	junction_11	118.334558385678	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCAGGCCTTCT	NA	False	NA	18	True	AATAAA	-25	NA	29533687	29630376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29533927_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600167_29600321_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.88	chr2	+	5613	23	NIC	ENSMUSG00000039844.21	novel	4205	24	NA	NA	-138	-4	intron_retention	FALSE	canonical	2	7	junction_1	91.0790797073103	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	NA	False	NA	13	True	AATAAA	-20	NA	29533688	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29533927_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.90	chr2	+	174	1	Intergenic	novelGene_15480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATCACAATA	NA	False	NA	NA	False	NA	NA	NA	29577896	29578070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29577900_29578100
ES.18668.91	chr2	+	4017	1	NIC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-14143	-41870	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	29578350	29582367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29578400_29582400
ES.18668.93	chr2	+	4666	17	ISM	ENSMUSG00000039844.21	ENSMUST00000238899.2	4205	24	56369	-1388	-2298	0	3prime_fragment	FALSE	canonical	3	295	junction_4	25.4629019359538	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29590195	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.94	chr2	+	4047	13	NNC	ENSMUSG00000039844.21	novel	6241	26	NA	NA	-1707	0	intron_retention	FALSE	non_canonical	0	0	junction_10	97.9875275509876	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGCCATGTCTGTGT	NA	False	NA	7	True	AATAAA	-14	NA	29590786	29630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624246_29626635_29626682_29627338_29627468_29627931
ES.18668.95	chr2	+	3878	14	ISM	ENSMUSG00000039844.21	ENSMUST00000238899.2	4205	24	63378	-1388	4711	0	3prime_fragment	FALSE	canonical	3	295	junction_1	23.9051379686831	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29597204	29630375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.96	chr2	+	3674	13	NNC	ENSMUSG00000039844.21	novel	4223	16	NA	NA	-8305	2	intron_retention	FALSE	canonical	0	0	junction_8	98.6571997147474	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCATGTCTGTGTCC	NA	False	NA	9	True	AATAAA	-16	NA	29612299	29630367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624608_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.97	chr2	+	4137	9	NIC	ENSMUSG00000039844.21	novel	4223	16	NA	NA	-153	-4	intron_retention	FALSE	canonical	3	324	junction_2	18.0099798722819	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGTGTCCAGGC	693	False	NA	13	True	AATAAA	-20	NA	29620451	29630371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29620625_29622838_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.98	chr2	+	3505	9	ISM	ENSMUSG00000039844.21	ENSMUST00000147488.2	4223	16	30149	2	70	-2	3prime_fragment	FALSE	canonical	3	323	junction_1	20.345454037696	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCCAGGCCT	1194	False	NA	15	True	AATAAA	-22	NA	29622642	29630373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18668.99	chr2	+	3112	7	ISM	ENSMUSG00000039844.21	ENSMUST00000147488.2	4223	16	31629	9	1550	1	3prime_fragment	FALSE	canonical	3	341	junction_6	16.0355507822117	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGCCATGTCTGTGTC	2674	False	NA	8	True	AATAAA	-15	NA	29624122	29630366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ES.18669.1	chr2	+	117	1	Intergenic	novelGene_15482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACCTAGTATTATAAAG	1689	False	NA	NA	False	CATAAA	-12	NA	29631448	29631565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29631400_29631600
ES.1867.1	chr1	+	1311	2	Antisense	novelGene_ENSMUSG00000059498.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCCGGCTGTCAGTTT	347	False	NA	NA	False	NA	NA	NA	170885437	170887801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_170885534_170886586
ES.18670.1	chr2	-	175	1	Intergenic	novelGene_15478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	29540617	29540442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29540400_29540600
ES.18671.1	chr2	-	292	1	Intergenic	novelGene_15479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29577804	29577512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29577500_29577800
ES.18672.1	chr2	-	178	2	Antisense	novelGene_ENSMUSG00000039844.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCCA	NA	False	NA	NA	False	NA	NA	NA	29599113	29585548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29585581_29598967
ES.18672.2	chr2	-	184	2	Antisense	novelGene_ENSMUSG00000039844.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCCA	NA	False	NA	NA	False	NA	NA	NA	29599116	29585548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29585564_29598947
ES.18672.3	chr2	-	178	1	Intergenic	novelGene_15481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29599115	29598937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29598900_29599100
ES.18673.1	chr2	-	5922	5	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	-135	3933	intron_retention	TRUE	non_canonical	0	0	junction_2	9.65660395791398	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATATTGACTTTAATAC	NA	False	NA	NA	False	AATGAA	-16	NA	29641832	29630997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29631701_29631742_29631806_29632110_29636606_29637219_29637663_29641614
ES.18673.10	chr2	-	1631	4	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	-461	-897	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.2740233382816	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCAAGCCTGTGTGTG	NA	False	NA	NA	False	GATAAA	-20	NA	29642158	29635827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29636606_29637219_29637663_29641614_29641916_29642049
ES.18673.2	chr2	-	4648	6	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	28	3932	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.14330356052997	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATATTGACTTTAATA	NA	False	NA	NA	False	AATGAA	-15	NA	29641669	29630998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29631701_29631742_29631806_29632110_29635352_29636461_29636606_29637219_29637663_29641614
ES.18673.3	chr2	-	4685	6	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	3178	3932	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.1784085199996	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATATTGACTTTAATA	NA	False	NA	NA	False	AATGAA	-15	NA	29638519	29630998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29631701_29631742_29631806_29632110_29635352_29636461_29636606_29637219_29637663_29638427
ES.18673.4	chr2	-	4588	6	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	2992	3870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.1784085199996	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGAAGTGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	29638705	29631060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29631701_29631742_29631806_29632110_29635352_29636461_29636606_29637219_29637663_29638648
ES.18673.5	chr2	-	4301	3	NIC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	-204	1896	intron_retention	FALSE	canonical	3	10	junction_2	7.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAAATGAAAACTAC	NA	False	NA	NA	False	AATACA	-31	NA	29641901	29633034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29636606_29637219_29637663_29641614
ES.18673.6	chr2	-	3423	4	FSM	ENSMUSG00000079497.5	ENSMUST00000129574.3	1091	4	-449	-1883	-449	1883	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACTTTTTTAAGTTGA	NA	False	NA	NA	False	AGTAAA	-38	NA	29642146	29633047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29635352_29636461_29636606_29637219_29637663_29641614
ES.18673.7	chr2	-	2772	4	FSM	ENSMUSG00000079497.5	ENSMUST00000129574.3	1091	4	65	-1746	65	1746	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAACCAGAAGAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	29641632	29633184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29635352_29636461_29636606_29637219_29637663_29641614
ES.18673.8	chr2	-	4017	3	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	3115	1744	intron_retention	FALSE	canonical	0	0	junction_2	12.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAACCAGAAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	29638582	29633186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29636606_29637219_29637663_29638427
ES.18673.9	chr2	-	1828	4	NNC	ENSMUSG00000079497.5	novel	1091	4	NA	NA	3036	613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.4243305140746	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGACTGCTGTTACTG	NA	False	NA	NA	False	NA	NA	NA	29638661	29634317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29635352_29636461_29636606_29637219_29637663_29638454
ES.18674.1	chr2	+	1743	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-489	737	277	20	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGCTCCCTTTGCCTGA	NA	False	NA	47	True	AATAAA	-37	NA	29677781	29687018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ES.18674.2	chr2	+	2237	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	-449	203	317	-203	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGTTTGGGGAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	29677821	29687552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ES.18674.3	chr2	+	2066	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	75	-150	63	-42	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	29678345	29687905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ES.18674.4	chr2	+	1130	7	FSM	ENSMUSG00000026798.11	ENSMUST00000176348.8	860	7	115	-385	64	1	multi-exon	FALSE	canonical	1	1	junction_4	47.2666784203088	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGGTTGTCCTAGA	NA	False	NA	28	True	AATAAA	-18	NA	29678346	29686999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680543_29685392_29685523_29685947_29686042_29686419
ES.18675.1	chr2	-	3751	1	Intergenic	novelGene_15483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTAGCCTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	29663267	29659516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29659500_29663300
ES.18675.10	chr2	-	2833	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	856	-281	2	281	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCCTCTGGGTTTATT	NA	False	NA	NA	False	NA	NA	NA	29677658	29665840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.11	chr2	-	2652	7	NNC	ENSMUSG00000039826.14	novel	3930	7	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.1014357818949	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677669	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29668116_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.12	chr2	-	2960	4	ISM	ENSMUSG00000039826.14	ENSMUST00000177133.8	806	6	2677	-2488	2628	4	3prime_fragment	FALSE	canonical	3	76	junction_3	43.2974210163454	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29675006	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29668881_29669834_29669908_29672131_29672214_29674964
ES.18675.13	chr2	-	3113	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	299	-4	299	4	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29678215	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.14	chr2	-	4129	7	NNC	ENSMUSG00000039826.14	novel	744	7	NA	NA	3	4	intron_retention	FALSE	canonical	0	0	junction_1	65.8164535321948	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677657	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.15	chr2	-	3331	7	NIC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	2	4	intron_retention	FALSE	canonical	3	126	junction_1	24.0791518861349	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677658	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.16	chr2	-	3666	7	NIC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	2	4	intron_retention	FALSE	canonical	3	126	junction_2	25.4863798048204	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677658	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.17	chr2	-	4284	6	ISM	ENSMUSG00000039826.14	ENSMUST00000113807.10	1035	7	3	14882	3	4	5prime_fragment	FALSE	canonical	3	134	junction_3	19.239542614106	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677657	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.18	chr2	-	2505	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	3	1422	3	4	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGATGTTTTAATTA	NA	False	NA	-2	True	TATAAA	-27	NA	29677669	29666117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.19	chr2	-	2355	10	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.5021093915612	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGTGATGTTTTAA	NA	False	NA	-5	True	TATAAA	-24	NA	29677657	29666120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29666544_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.2	chr2	-	4405	1	Genic_Genomic	ENSMUSG00000039826.14	novel	NA	NA	NA	NA	5362	2254	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGGACATTCGTTT	NA	False	NA	NA	False	NA	NA	NA	29666846	29662441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_29662400_29666800
ES.18675.20	chr2	-	2694	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.8068764521089	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGTGATGTTTTAA	NA	False	NA	-5	True	TATAAA	-24	NA	29677661	29666120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29667969_29668743_29668881_29669834_29669908_29671693_29671832_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.21	chr2	-	2412	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.2362155894325	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGTGATGTTTTAA	NA	False	NA	-5	True	TATAAA	-24	NA	29677672	29666120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.22	chr2	-	2292	10	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	43	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.5021093915612	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCATGTGATGTTTTA	NA	False	NA	-6	True	TATAAA	-23	NA	29677591	29666121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666269_29666544_29666698_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.23	chr2	-	3107	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.1855658581969	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677680	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29668166_29668406_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.24	chr2	-	2299	10	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	74.9925099140566	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677657	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666271_29666347_29666466_29666585_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676566_29677514
ES.18675.25	chr2	-	3524	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	60.0057820343258	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677680	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666243_29666401_29667969_29668743_29668881_29669834_29669908_29672131_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.26	chr2	-	2363	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.2362155894325	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677664	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666505_29666698_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.29	chr2	-	3380	7	NNC	ENSMUSG00000039826.14	novel	744	7	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	79.1517529812196	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677669	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29667969_29669834_29669908_29672131_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.3	chr2	-	3868	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	0	59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.2362155894325	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAACCTGTTTGTGCAC	NA	False	NA	NA	False	NA	NA	NA	29677683	29664636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666505_29666698_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.30	chr2	-	3477	2	NNC	ENSMUSG00000039826.14	novel	762	2	NA	NA	2455	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29669753	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666244_29666397
ES.18675.31	chr2	-	2425	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	-35	-1646	3	-1	multi-exon	FALSE	canonical	2	14	junction_1	60.8041025662651	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677669	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.33	chr2	-	2237	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.6692070183126	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677680	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666280_29666436_29666544_29666585_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.34	chr2	-	2345	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.2362155894325	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	False	NA	-7	True	TATAAA	-22	NA	29677664	29666122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666247_29666458_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.36	chr2	-	1853	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	751	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.8598255612595	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTTTCTTTCTTATG	NA	False	NA	-7	True	TATAAA	-20	NA	29677639	29666948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29668116_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.37	chr2	-	1744	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	837	827	-5	751	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTTTCTTTCTTATG	NA	False	NA	-7	True	TATAAA	-20	NA	29677677	29666948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.38	chr2	-	2522	7	NIC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	3	751	intron_retention	FALSE	canonical	3	126	junction_1	24.0791518861349	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTTTCTTTCTTATG	NA	False	NA	-7	True	TATAAA	-20	NA	29677680	29666948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.39	chr2	-	2697	6	NIC	ENSMUSG00000039826.14	novel	744	7	NA	NA	3	751	intron_retention	FALSE	canonical	2	14	junction_1	65.4870979659352	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTTTCTTTCTTATG	NA	False	NA	-7	True	TATAAA	-20	NA	29677657	29666948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29667969_29669834_29669908_29672131_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.4	chr2	-	3894	9	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	0	46	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	57.2362155894325	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCTTGTTCATGCAAA	NA	False	NA	NA	False	NA	NA	NA	29677683	29664649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.40	chr2	-	1376	6	ISM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	1082	-819	1082	750	3prime_fragment	FALSE	canonical	2	14	junction_1	62.8821119238214	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGTTTTCTTTCTTAT	NA	False	NA	-8	True	TATAAA	-19	NA	29676552	29666949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487
ES.18675.41	chr2	-	2238	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-563	2255	279	749	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGTTTTCTTTCTTA	NA	False	NA	-9	True	TATAAA	-18	NA	29678235	29666950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.42	chr2	-	1555	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	850	1003	-4	575	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGTATGTGTCAGT	NA	False	NA	NA	False	NA	NA	NA	29677664	29667124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.43	chr2	-	1038	7	ISM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	857	2288	3	196	5prime_fragment	FALSE	canonical	3	126	junction_1	24.0791518861349	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTGGGTCTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	29677657	29668409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.44	chr2	-	2770	1	NIC	ENSMUSG00000039826.14	novel	1035	7	NA	NA	984	151	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	29671224	29668454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29668500_29671200
ES.18675.45	chr2	-	931	6	FSM	ENSMUSG00000039826.14	ENSMUST00000177133.8	806	6	26	-151	3	151	multi-exon	FALSE	canonical	3	76	junction_3	43.1879612855249	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	29677657	29668454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.46	chr2	-	2355	4	ISM	ENSMUSG00000039826.14	ENSMUST00000177133.8	806	6	33	1596	-4	-979	5prime_fragment	FALSE	canonical	3	76	junction_1	50.6776303927307	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTACTTATTTTTATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	29677650	29670201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.5	chr2	-	3874	8	NNC	ENSMUSG00000039826.14	novel	3408	8	NA	NA	-46	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.4944959851495	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTGTCTTGTTCATG	NA	False	NA	NA	False	NA	NA	NA	29677729	29664653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29666232_29666386_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.6	chr2	-	4513	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	-543	-40	299	40	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGCCTGTCTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	29678215	29664655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.7	chr2	-	4001	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	831	-1424	0	-2	multi-exon	FALSE	canonical	3	126	junction_2	23.9267589931935	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGACTGGTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	29677683	29664697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ES.18675.8	chr2	-	3733	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	8	189	-4	-189	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCTTAATTATATTTTT	NA	False	NA	NA	False	NA	NA	NA	29677664	29664884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18675.9	chr2	-	2772	7	FSM	ENSMUSG00000039826.14	ENSMUST00000156846.8	3930	7	15	1143	3	283	multi-exon	FALSE	canonical	3	76	junction_4	39.677869566464	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTCTGGGTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	29677657	29665838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29674964_29675040_29676487_29676620_29677514
ES.18676.1	chr2	+	3015	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	-20	1059	-20	-1059	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTCCTTGCCTACC	NA	False	NA	36	True	AATAAA	-28	NA	29692625	29706475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.10	chr2	+	4130	12	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	53	-1070	intron_retention	FALSE	canonical	3	148	junction_3	11.6569420312817	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTGACAGCCTGGCT	NA	False	NA	25	True	AATAAA	-17	NA	29692698	29706464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.12	chr2	+	3690	11	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	79	-1069	intron_retention	FALSE	canonical	3	138	junction_1	14.4	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTGACAGCCTGGCTC	NA	False	NA	26	True	AATAAA	-18	NA	29692724	29706465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29701408_29701580_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.13	chr2	+	2677	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	126	1251	126	-1251	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGTTTCTCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	29692771	29706283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.14	chr2	+	3593	1	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	6057	-875	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGTCTCCTGAATTAT	943	False	NA	NA	False	TTTAAA	-19	NA	29703066	29706659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29703100_29706700
ES.18676.15	chr2	+	3024	1	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	6434	-1067	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACAGCCTGGCTCCT	1320	False	NA	28	True	AATAAA	-20	NA	29703443	29706467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29703400_29706500
ES.18676.2	chr2	+	4051	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	6	-3	6	3	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAGAGTGAGGATATT	NA	False	NA	NA	False	TATAAA	-17	NA	29692651	29707537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.3	chr2	+	3218	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	9	827	9	-827	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGCCATTAGGAGTGGG	NA	False	NA	NA	False	NA	NA	NA	29692654	29706707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.4	chr2	+	4938	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	19	-903	19	903	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGTGATGGTACATGC	NA	False	NA	NA	False	NA	NA	NA	29692664	29708437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.5	chr2	+	5094	12	NNC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	28	857	intron_retention	FALSE	canonical	0	0	junction_6	47.3881458134454	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTAAATTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	29692673	29708391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699936_29700872_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.7	chr2	+	2945	13	NNC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	32	-1068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.5704364973698	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGACAGCCTGGCTCC	NA	False	NA	27	True	AATAAA	-19	NA	29692677	29706466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701206_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18676.8	chr2	+	3017	12	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	41	-1067	intron_retention	FALSE	canonical	3	138	junction_1	13.7912416811336	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACAGCCTGGCTCCT	NA	False	NA	28	True	AATAAA	-20	NA	29692686	29706467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702947_29705587
ES.18676.9	chr2	+	3721	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	44	289	44	-289	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTTTTGTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	29692689	29707245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ES.18677.1	chr2	+	1556	6	NNC	ENSMUSG00000069020.10	novel	2084	2	NA	NA	1429	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.66665325285	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTTTACTAGCCTTGC	9392	False	NA	13	True	AATAAA	-15	NA	29711515	29734075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29711776_29715293_29715429_29722705_29722775_29731413_29731496_29732732_29732782_29733114
ES.18677.10	chr2	+	1258	6	NNC	ENSMUSG00000069020.10	novel	681	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	151.464319230636	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717402	29734074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732507_29732559_29732732_29732782_29733114
ES.18677.100	chr2	+	2160	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	86	3	-5	0	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7214	False	NA	10	True	AATAAA	-14	NA	29779817	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.104	chr2	+	5947	17	NNC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	317.503124984621	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7216	False	NA	12	True	AATAAA	-12	NA	29779819	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811829_29815220_29816115_29816715_29816842_29820481
ES.18677.105	chr2	+	3325	15	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	577	junction_2	169.902252810856	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7216	False	NA	10	True	AATAAA	-14	NA	29779819	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.106	chr2	+	7127	18	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	233	junction_2	261.556758116213	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7216	False	NA	14	True	AATAAA	-14	NA	29779819	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.109	chr2	+	6464	17	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	318.289373055401	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7220	False	NA	12	True	AATAAA	-12	NA	29779823	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811829_29815220_29816842_29820481
ES.18677.11	chr2	+	1690	1	NIC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	725	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	8356	False	NA	12	True	AATAAA	-14	NA	29732384	29734074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29732400_29734100
ES.18677.110	chr2	+	6071	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	101	junction_2	282.566541571207	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7220	False	NA	12	True	AATAAA	-12	NA	29779823	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.112	chr2	+	3900	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	577	junction_4	192.647612217424	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7220	False	NA	13	True	AATAAA	-13	NA	29779823	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.114	chr2	+	3178	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	56	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	282.415381132119	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAACAGGTAAATTA	7220	False	NA	NA	False	AATAAA	-27	NA	29779823	29821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.115	chr2	+	4978	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	27	junction_1	351.291986814388	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7220	False	NA	12	True	AATAAA	-12	NA	29779823	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.116	chr2	+	6108	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	-1	intron_retention	FALSE	canonical	3	577	junction_4	181.404477584029	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7220	False	NA	12	True	AATAAA	-12	NA	29779823	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.119	chr2	+	7102	18	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	2	188	intron_retention	FALSE	canonical	3	577	junction_3	164.720419526532	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTACATAGCAACTGGC	7221	False	NA	NA	False	AATAAA	-17	NA	29779824	29821295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.12	chr2	+	2734	14	NNC	ENSMUSG00000039787.14	novel	599	4	NA	NA	-13319	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.20830600101257	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACAGCTGAGCCTCTT	NA	False	NA	18	True	AATAAA	-29	NA	29745856	29772851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29745899_29757618_29757718_29758989_29759101_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ES.18677.121	chr2	+	3855	22	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	414.866658905246	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7221	False	NA	13	True	AATAAA	-13	NA	29779824	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29782819_29782923_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802579_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.122	chr2	+	3737	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	301.776375167802	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7221	False	NA	14	True	AATAAA	-14	NA	29779824	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.123	chr2	+	3214	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	18	594	2	56	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAACAGGTAAATTA	7221	False	NA	NA	False	AATAAA	-27	NA	29779824	29821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.124	chr2	+	3841	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	2	-1	intron_retention	FALSE	canonical	3	561	junction_4	194.728577349513	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7221	False	NA	12	True	AATAAA	-12	NA	29779824	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.125	chr2	+	2357	17	NNC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	317.340117224406	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7222	False	NA	10	True	AATAAA	-14	NA	29779825	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783275_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.126	chr2	+	3856	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	299.933009187052	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7223	False	NA	12	True	AATAAA	-12	NA	29779826	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783275_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.128	chr2	+	3697	21	NNC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	395.852560936518	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7224	False	NA	12	True	AATAAA	-12	NA	29779827	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783455_29783525_29789978_29790083_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.129	chr2	+	6759	19	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	56	intron_retention	FALSE	non_canonical	0	0	junction_8	454.483280736636	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAACAGGTAAATTA	7224	False	NA	NA	False	AATAAA	-27	NA	29779827	29821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780782_29781015_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.13	chr2	+	130	1	Intergenic	novelGene_15486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29755926	29756056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29755900_29756100
ES.18677.130	chr2	+	7448	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_1	356.70170347667	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7224	False	NA	14	True	AATAAA	-14	NA	29779827	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780782_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.131	chr2	+	3892	22	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	348.054306759038	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7225	False	NA	12	True	AATAAA	-12	NA	29779828	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29780868_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.132	chr2	+	3739	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	38	junction_5	293.822271960449	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCAGACTCCTTTGAT	7225	False	NA	11	True	AATAAA	-11	NA	29779828	29821755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792198_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.133	chr2	+	3959	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	293.117975395573	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7225	False	NA	13	True	AATAAA	-13	NA	29779828	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815796_29816115_29816715_29816842_29820481
ES.18677.134	chr2	+	3592	20	NIC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_10	357.511334884136	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7226	False	NA	13	True	AATAAA	-13	NA	29779829	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.135	chr2	+	4925	19	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	300.623241505598	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7226	False	NA	13	True	AATAAA	-13	NA	29779829	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811829_29815220_29816115_29816715_29816842_29820481
ES.18677.137	chr2	+	7501	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	7	junction_1	355.743293483835	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7226	False	NA	12	True	AATAAA	-12	NA	29779829	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780782_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.138	chr2	+	6342	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	405.643858575475	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7226	False	NA	12	True	AATAAA	-12	NA	29779829	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.139	chr2	+	5588	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	192	intron_retention	FALSE	canonical	3	561	junction_4	183.725843570163	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAGCAACTGGCATAG	7226	False	NA	NA	False	AATAAA	-21	NA	29779829	29821299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.14	chr2	+	2685	12	NIC	ENSMUSG00000039787.14	novel	599	4	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	6.67547627297666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGCTGAGCCTCTTTGT	NA	False	NA	21	True	AATAAA	-32	NA	29759157	29772854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29759358_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ES.18677.140	chr2	+	3750	20	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	347.837920354531	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7226	False	NA	14	True	AATAAA	-14	NA	29779829	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813809_29815951_29816115_29816715_29816842_29820481
ES.18677.142	chr2	+	3573	20	NNC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_17	336.172475848344	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7227	False	NA	12	True	AATAAA	-12	NA	29779830	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813635_29815951_29816115_29816715_29816842_29820481
ES.18677.143	chr2	+	3759	22	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	293.254233305291	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCAAATGTAGACCACC	7227	False	NA	NA	False	AATAAA	-12	NA	29779830	29824625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481_29821753_29824606
ES.18677.147	chr2	+	3525	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	193	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	344.707329276798	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAGCAACTGGCATAGT	7227	False	NA	NA	False	AATAAA	-22	NA	29779830	29821300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.148	chr2	+	3828	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	386.301902661636	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7228	False	NA	14	True	AATAAA	-14	NA	29779831	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.15	chr2	+	2711	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	7	-3	7	3	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGAGCCTCTTTGTG	NA	False	NA	22	True	AATAAA	-33	NA	29759512	29772855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ES.18677.151	chr2	+	3812	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	434.380993651229	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7228	False	NA	13	True	AATAAA	-13	NA	29779831	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.152	chr2	+	3784	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_18	277.557453511881	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7228	False	NA	13	True	AATAAA	-13	NA	29779831	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813635_29815951_29816115_29816715_29816842_29820481
ES.18677.153	chr2	+	6985	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	2	192	intron_retention	FALSE	canonical	3	7	junction_1	356.70170347667	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAGCAACTGGCATAG	7228	False	NA	NA	False	AATAAA	-21	NA	29779831	29821299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780782_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.156	chr2	+	7286	19	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	7	junction_1	404.039804450313	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7230	False	NA	12	True	AATAAA	-12	NA	29779833	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780782_29781015_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.157	chr2	+	8224	17	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	317.510279115102	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7230	False	NA	12	True	AATAAA	-12	NA	29779833	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.158	chr2	+	3838	22	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	362.229885288222	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7231	False	NA	14	True	AATAAA	-14	NA	29779834	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29795124_29795221_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.159	chr2	+	3789	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	299.096539598839	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7232	False	NA	12	True	AATAAA	-12	NA	29779835	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783160_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.16	chr2	+	2613	11	NIC	ENSMUSG00000039787.14	novel	2715	12	NA	NA	24	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	7.4	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACAGCTGAGCCTCTT	NA	False	NA	18	True	AATAAA	-29	NA	29759529	29772851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ES.18677.160	chr2	+	3100	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	29	-47	-1	47	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAGAAATAGTGAAAACA	7232	False	NA	NA	False	AATAAA	-18	NA	29779835	29821154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.162	chr2	+	7654	17	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	233	junction_2	270.401025966526	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7232	False	NA	13	True	AATAAA	-13	NA	29779835	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816842_29820481
ES.18677.163	chr2	+	2533	18	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	372.952959546646	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7232	False	NA	10	True	AATAAA	-14	NA	29779835	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.164	chr2	+	7354	18	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	577	junction_4	165.841505191827	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7232	False	NA	12	True	AATAAA	-12	NA	29779835	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.167	chr2	+	5081	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	577	junction_4	182.069244729974	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7232	False	NA	12	True	AATAAA	-12	NA	29779835	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29811121_29812224_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.168	chr2	+	5125	20	NNC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_8	370.204398135533	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29813809_29815951_29816115_29816715_29816842_29820481
ES.18677.169	chr2	+	5650	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	203	intron_retention	FALSE	canonical	3	577	junction_4	181.404477584029	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCATAGTCCCAGCTACA	7232	False	NA	NA	False	AATAAA	-32	NA	29779835	29821310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.17	chr2	+	2619	13	NNC	ENSMUSG00000039787.14	novel	2715	12	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	7.00545422430901	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTAACAGCTGAGCCTC	NA	False	NA	16	True	AATAAA	-27	NA	29759541	29772849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707_29771788_29771844
ES.18677.170	chr2	+	3811	22	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	292.118146197508	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCAAATGTAGACCACC	7232	False	NA	NA	False	AATAAA	-12	NA	29779835	29824625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481_29821753_29824606
ES.18677.171	chr2	+	5002	18	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	309.012849532945	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7232	False	NA	12	True	AATAAA	-12	NA	29779835	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29814634_29821078
ES.18677.173	chr2	+	3577	20	NNC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	409.69672588662	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7232	False	NA	12	True	AATAAA	-12	NA	29779835	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793996_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813653_29815951_29816115_29816715_29816842_29820481
ES.18677.174	chr2	+	3725	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	282.74739167674	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7232	False	NA	13	True	AATAAA	-13	NA	29779835	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783505_29791083_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.175	chr2	+	4842	14	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	561	junction_2	177.92868061281	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7232	False	NA	10	True	AATAAA	-14	NA	29779835	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.177	chr2	+	5241	19	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_18	426.36138166792	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7232	False	NA	14	True	AATAAA	-14	NA	29779835	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29814634_29821078
ES.18677.178	chr2	+	2221	17	NNC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	405.829397653743	1326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCCTGCGTGTTGCAC	7233	False	NA	8	True	AATAAA	-12	NA	29779836	29812546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29782819_29782959_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.18	chr2	+	3894	21	NNC	ENSMUSG00000026790.20	novel	553	4	NA	NA	-386	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	294.483089497513	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	6243	False	NA	12	True	AATAAA	-12	NA	29778846	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779043_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.180	chr2	+	3834	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	355.004704194184	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7233	False	NA	13	True	AATAAA	-13	NA	29779836	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815876_29816115_29816715_29816842_29820481
ES.18677.182	chr2	+	5942	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_2	266.873577135016	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7233	False	NA	13	True	AATAAA	-13	NA	29779836	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.183	chr2	+	3241	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	30	-189	0	189	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACATAGCAACTGGCA	7233	False	NA	NA	False	AATAAA	-18	NA	29779836	29821296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.185	chr2	+	4808	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	577	junction_2	198.129088733757	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7233	False	NA	12	True	AATAAA	-12	NA	29779836	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.186	chr2	+	3293	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	47	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_18	292.615938561111	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAGAAATAGTGAAAACA	7233	False	NA	NA	False	AATAAA	-18	NA	29779836	29821154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813809_29815951_29816115_29816715_29816842_29820481
ES.18677.188	chr2	+	7299	18	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	306.191404958709	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7233	False	NA	12	True	AATAAA	-12	NA	29779836	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.189	chr2	+	3736	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	296.840239017556	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7233	False	NA	12	True	AATAAA	-12	NA	29779836	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804320_29804412_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.19	chr2	+	4975	19	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	-202	0	intron_retention	FALSE	non_canonical	0	0	junction_7	400.823492602694	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	6427	False	NA	13	True	AATAAA	-13	NA	29779030	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.194	chr2	+	3515	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	296.928562094747	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7234	False	NA	13	True	AATAAA	-13	NA	29779837	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.195	chr2	+	4806	20	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	366.86743852722	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7236	False	NA	13	True	AATAAA	-13	NA	29779839	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.197	chr2	+	4734	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	561	junction_2	200.350865073756	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7251	False	NA	13	True	AATAAA	-13	NA	29779854	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.198	chr2	+	6826	21	NNC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	15	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	298.874656001475	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAACAGGTAAATTA	7257	False	NA	NA	False	AATAAA	-27	NA	29779860	29821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29797234_29802046_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.2	chr2	+	1260	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	-1	937	-1	1	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTACTAGCCTTGCTT	NA	False	NA	15	True	AATAAA	-17	NA	29717352	29734077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
ES.18677.20	chr2	+	3852	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	275.689789437331	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6535	False	NA	14	True	AATAAA	-14	NA	29779138	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.200	chr2	+	3502	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	299.035744905692	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7310	False	NA	12	True	AATAAA	-12	NA	29779913	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.201	chr2	+	3728	7	NNC	ENSMUSG00000026790.20	novel	2353	17	NA	NA	257	-1458	intron_retention	FALSE	canonical	2	3	junction_6	423.312729157377	1260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTTTGCTTCACAACC	8205	False	NA	NA	False	NA	NA	NA	29780808	29803427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29803138
ES.18677.202	chr2	+	7536	16	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1058	0	intron_retention	FALSE	canonical	3	577	junction_2	188.644003350226	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	NA	False	NA	13	True	AATAAA	-13	NA	29783065	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.203	chr2	+	6677	14	NIC	ENSMUSG00000026790.20	novel	3188	21	NA	NA	-1419	-3	intron_retention	FALSE	canonical	3	967	junction_12	96.0916106282754	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTCAGACTCCTTTGA	3808	False	NA	10	True	AATAAA	-10	NA	29792136	29821754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.204	chr2	+	3000	15	ISM	ENSMUSG00000026790.20	ENSMUST00000046571.14	3959	22	13422	1	-227	0	3prime_fragment	FALSE	canonical	3	704	junction_11	174.066665624503	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	5000	False	NA	13	True	AATAAA	-13	NA	29793328	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.206	chr2	+	2688	1	Intergenic	novelGene_15491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGATAGATCAGGCTGAA	9817	False	NA	NA	False	NA	NA	NA	29798145	29800833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29798100_29800800
ES.18677.207	chr2	+	262	1	Intergenic	novelGene_15493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCAGTGCGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	29801072	29801334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29801100_29801300
ES.18677.209	chr2	+	4583	2	ISM	ENSMUSG00000026790.20	ENSMUST00000152503.2	4291	3	391	-460	391	460	3prime_fragment	FALSE	canonical	3	1268	junction_1	0	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1141	False	NA	NA	False	NA	NA	NA	29804796	29809667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29804932_29805219
ES.18677.21	chr2	+	3623	20	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	330.859302599071	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	6609	False	NA	13	True	AATAAA	-13	NA	29779212	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.210	chr2	+	6558	4	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-4643	0	intron_retention	FALSE	canonical	3	967	junction_2	65.7926034343274	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7185	False	NA	13	True	AATAAA	-13	NA	29810840	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29810898_29811015_29816115_29816715_29816842_29820481
ES.18677.211	chr2	+	1023	7	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-4610	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	378.08703436584	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7218	False	NA	13	True	AATAAA	-13	NA	29810873	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29821412
ES.18677.212	chr2	+	5956	2	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	-3323	-1	intron_retention	FALSE	canonical	3	1014	junction_1	0	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	8505	False	NA	12	True	AATAAA	-12	NA	29812160	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29816842_29820481
ES.18677.213	chr2	+	3273	4	NNC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	-1226	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	467.32025659308	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCAAATGTAGACCACC	NA	False	NA	NA	False	AATAAA	-12	NA	29814257	29824625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29816115_29816715_29816842_29820481_29821753_29824606
ES.18677.214	chr2	+	4361	1	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	NA	False	NA	14	True	AATAAA	-14	NA	29817397	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29817400_29821800
ES.18677.22	chr2	+	2059	16	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	361.569627534664	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	6615	False	NA	10	True	AATAAA	-14	NA	29779218	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.23	chr2	+	3543	20	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	5	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	393.794904224011	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	6634	False	NA	12	True	AATAAA	-12	NA	29779237	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.25	chr2	+	2195	17	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	383.622780215148	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	6636	False	NA	10	True	AATAAA	-14	NA	29779239	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.26	chr2	+	3676	21	NNC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	351.378353772682	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	6637	False	NA	13	True	AATAAA	-13	NA	29779240	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792208_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.27	chr2	+	3690	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	276.935913164039	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.29	chr2	+	10360	15	NIC	ENSMUSG00000026790.20	novel	4291	3	NA	NA	-2	0	intron_retention	FALSE	canonical	3	114	junction_1	305.863056258309	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	6640	False	NA	13	True	AATAAA	-13	NA	29779243	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816842_29820481
ES.18677.3	chr2	+	2253	5	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.749779541275	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTGTTGT	NA	False	NA	13	True	AATAAA	-23	NA	29717382	29735013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733027
ES.18677.30	chr2	+	3710	21	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	338.338628447891	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6640	False	NA	14	True	AATAAA	-14	NA	29779243	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.31	chr2	+	3246	21	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	2	191	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	338.338628447891	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATAGCAACTGGCATA	6644	False	NA	NA	False	AATAAA	-20	NA	29779247	29821298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.32	chr2	+	8166	17	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	114	junction_1	290.515752316032	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6644	False	NA	14	True	AATAAA	-14	NA	29779247	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.34	chr2	+	8221	17	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	114	junction_1	288.891030223768	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	6644	False	NA	12	True	AATAAA	-12	NA	29779247	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.35	chr2	+	3917	22	NIC	ENSMUSG00000026790.20	novel	2450	16	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	348.184152542347	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTCAGACTCCTTTGA	6646	False	NA	10	True	AATAAA	-10	NA	29779249	29821754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.36	chr2	+	7149	19	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	4	-1	intron_retention	FALSE	canonical	3	114	junction_1	275.206146078728	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	6646	False	NA	12	True	AATAAA	-12	NA	29779249	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.40	chr2	+	3750	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	13	15	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTATCCCCTCCTT	7141	False	NA	29	True	AATAAA	-29	NA	29779744	29821773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.41	chr2	+	3889	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	-55	-8	20	7	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGATTTCCCTTATC	7148	False	NA	21	True	AATAAA	-21	NA	29779751	29821765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.42	chr2	+	3835	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	20	10	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTCCCTTATCCCC	7148	False	NA	24	True	AATAAA	-24	NA	29779751	29821768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.43	chr2	+	2379	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	-77	3	21	0	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7149	False	NA	10	True	AATAAA	-14	NA	29779752	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.46	chr2	+	3668	20	NIC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	29	6	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTGATTTCCCTTAT	7157	False	NA	20	True	AATAAA	-20	NA	29779760	29821764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.47	chr2	+	3771	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	-38	-651	-28	0	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7165	False	NA	14	True	AATAAA	-14	NA	29779768	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.48	chr2	+	3819	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	282.415381132119	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7173	False	NA	13	True	AATAAA	-13	NA	29779776	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.49	chr2	+	3173	20	NIC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	-9	189	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACATAGCAACTGGCA	7184	False	NA	NA	False	AATAAA	-18	NA	29779787	29821296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.5	chr2	+	5314	34	Fusion	ENSMUSG00000026790.20_ENSMUSG00000069020.10	novel	681	6	NA	NA	14	0	multi-exon	FALSE	canonical	0	0	junction_3	516.271157602897	1526	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	NA	False	NA	14	True	AATAAA	-14	NA	29717386	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_29717448_29722703_29722775_29731413_29731496_29757618_29757718_29758989_29759101_29761034_29761146_29761286_29761405_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707_29771957_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.51	chr2	+	2129	16	NIC	ENSMUSG00000026790.20	novel	2364	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	278.954476572791	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7188	False	NA	10	True	AATAAA	-14	NA	29779791	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.52	chr2	+	7251	19	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	561	junction_4	166.4204199395	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7189	False	NA	14	True	AATAAA	-14	NA	29779792	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.53	chr2	+	4773	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	577	junction_4	195.948987086349	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7189	False	NA	13	True	AATAAA	-13	NA	29779792	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.54	chr2	+	2288	17	NIC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	172.1394783308	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTGTTGCACAAAGTGAT	7189	False	NA	16	True	AATAAA	-20	NA	29779792	29812554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.55	chr2	+	4073	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	295.634588639422	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7189	False	NA	13	True	AATAAA	-13	NA	29779792	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29780224_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.57	chr2	+	7306	19	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	577	junction_4	163.599188397878	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7191	False	NA	14	True	AATAAA	-14	NA	29779794	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.58	chr2	+	3922	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	385.584283912091	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7191	False	NA	14	True	AATAAA	-14	NA	29779794	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.59	chr2	+	2924	14	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	439.22162189047	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7191	False	NA	13	True	AATAAA	-13	NA	29779794	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804286_29816048_29816115_29816715_29816842_29820481
ES.18677.6	chr2	+	2231	6	FSM	ENSMUSG00000069020.10	ENSMUST00000147325.2	681	6	25	-1575	-9	-6	multi-exon	FALSE	canonical	3	23	junction_3	146.238708965855	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATTTTTGTTGTTGTT	NA	False	NA	8	True	AATAAA	-18	NA	29717397	29735008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732473_29732559_29732732_29732782_29733114
ES.18677.60	chr2	+	3323	21	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-2	192	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAGCAACTGGCATAG	7191	False	NA	NA	False	AATAAA	-21	NA	29779794	29821299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.61	chr2	+	5004	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	577	junction_4	177.594811009519	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7191	False	NA	12	True	AATAAA	-12	NA	29779794	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.62	chr2	+	3720	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_10	297.137320539877	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7192	False	NA	13	True	AATAAA	-13	NA	29779795	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.64	chr2	+	3771	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	292.472032851006	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7192	False	NA	13	True	AATAAA	-13	NA	29779795	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812375_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.66	chr2	+	3552	19	NIC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	356.510557736763	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCAGACTCCTTTGAT	7192	False	NA	11	True	AATAAA	-11	NA	29779795	29821755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.69	chr2	+	4017	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	344.707329276798	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGACTCCTTTGATTTCC	7194	False	NA	15	True	AATAAA	-15	NA	29779797	29821759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.7	chr2	+	1291	6	NNC	ENSMUSG00000069020.10	novel	681	6	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	146.967207226646	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717400	29734074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732476_29732559_29732732_29732782_29733114
ES.18677.70	chr2	+	3373	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	-4	457	-4	193	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAGCAACTGGCATAGT	7199	False	NA	NA	False	AATAAA	-22	NA	29779802	29821300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.71	chr2	+	3851	21	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	291.234424476228	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7200	False	NA	14	True	AATAAA	-14	NA	29779803	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813529_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.72	chr2	+	3023	20	NIC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	-2	56	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTGAAAACAGGTAAATTA	7201	False	NA	NA	False	AATAAA	-27	NA	29779804	29821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.73	chr2	+	2406	2	ISM	ENSMUSG00000026790.20	ENSMUST00000153216.8	828	5	-32	7031	-2	1885	intron_retention	FALSE	canonical	3	1240	junction_1	0	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCTAAAATAGTTTTCAA	7201	False	NA	NA	False	NA	NA	NA	29779804	29784474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29779934_29782197
ES.18677.74	chr2	+	3972	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	389.329640742903	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7201	False	NA	14	True	AATAAA	-14	NA	29779804	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.75	chr2	+	3751	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_18	278.863515003308	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7203	False	NA	12	True	AATAAA	-12	NA	29779806	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813635_29815951_29816115_29816715_29816842_29820481
ES.18677.76	chr2	+	3069	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	48	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAGAAATAGTGAAAACAG	7204	False	NA	NA	False	AATAAA	-19	NA	29779807	29821155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.79	chr2	+	6121	19	NNC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	418.440033611024	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7204	False	NA	13	True	AATAAA	-13	NA	29779807	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813403_29816115_29816715_29816842_29820481
ES.18677.8	chr2	+	2269	5	NIC	ENSMUSG00000069020.10	novel	681	6	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	30	junction_3	130.245921241319	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTTGTTTACTAGCCT	NA	False	NA	10	True	AATAAA	-12	NA	29717401	29734072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29717448_29722703_29722775_29731413_29732559_29732732_29732782_29733114
ES.18677.80	chr2	+	4069	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	343.861116034049	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTGATTTCCCTTAT	7204	False	NA	20	True	AATAAA	-20	NA	29779807	29821764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.81	chr2	+	2625	17	NNC	ENSMUSG00000026790.20	novel	2305	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	404.494727252408	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	7204	False	NA	10	True	AATAAA	-14	NA	29779807	29812548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29782819_29783275_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ES.18677.83	chr2	+	7891	18	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	54	intron_retention	FALSE	canonical	3	561	junction_4	168.366875733592	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGGTGACACATACC	7204	False	NA	68	True	TATAAA	-10	NA	29779807	29821812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816842_29820481
ES.18677.84	chr2	+	3887	21	NNC	ENSMUSG00000026790.20	novel	3082	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_18	354.55421306198	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7204	False	NA	12	True	AATAAA	-12	NA	29779807	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813809_29815951_29816115_29816715_29816842_29820481
ES.18677.85	chr2	+	3655	20	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	368.888973530307	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCAGACTCCTTTGAT	7204	False	NA	11	True	AATAAA	-11	NA	29779807	29821755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802574_29802653_29804242_29804315_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.87	chr2	+	7081	18	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	233	junction_2	263.312160975613	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7205	False	NA	14	True	AATAAA	-14	NA	29779808	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29816115_29816715_29816842_29820481
ES.18677.88	chr2	+	6068	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	561	junction_4	183.725843570163	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7205	False	NA	14	True	AATAAA	-14	NA	29779808	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
ES.18677.89	chr2	+	3981	21	NNC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_18	291.382647904778	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7205	False	NA	13	True	AATAAA	-13	NA	29779808	29821757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813809_29815951_29816115_29816715_29816842_29820481
ES.18677.9	chr2	+	1294	5	NNC	ENSMUSG00000069020.10	novel	2196	5	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.749779541275	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTACTAGCCTTG	NA	False	NA	12	True	AATAAA	-14	NA	29717402	29734074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733027
ES.18677.90	chr2	+	4288	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	348.184152542347	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTATGTCAGACTCCTT	7205	False	NA	7	True	AATAAA	-7	NA	29779808	29821751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29780224_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.94	chr2	+	4930	20	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	2	-1	intron_retention	FALSE	canonical	3	561	junction_4	179.974436473443	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7208	False	NA	12	True	AATAAA	-12	NA	29779811	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29813652_29815951_29816115_29816715_29816842_29820481
ES.18677.95	chr2	+	4661	1	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	4	1885	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCTAAAATAGTTTTCAA	7210	False	NA	NA	False	NA	NA	NA	29779813	29784474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779800_29784500
ES.18677.96	chr2	+	6662	19	NIC	ENSMUSG00000026790.20	novel	3826	21	NA	NA	4	-1	intron_retention	FALSE	canonical	3	561	junction_4	187.045152005843	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGACTCCTTTGATT	7210	False	NA	12	True	AATAAA	-12	NA	29779813	29821756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816842_29820481
ES.18677.99	chr2	+	3809	21	NNC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	298.874656001475	1406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7213	False	NA	14	True	AATAAA	-14	NA	29779816	29821758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807629_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ES.18678.1	chr2	+	2346	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	-20	1704	-20	450	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTTGTCAGGTTTGGT	NA	False	NA	15	True	NA	NA	NA	29825417	29848679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.10	chr2	+	2015	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	1	354	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	136.66595121764	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGGAAGAATCATGTCA	NA	False	NA	-81	True	AATAAA	-16	NA	29825438	29848583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830198_29832612_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.11	chr2	+	3080	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	-942	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	131.53781036476	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTTACCTCAATAT	NA	False	NA	17	True	AATAAA	-27	NA	29825439	29849441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829500_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.12	chr2	+	2871	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	1	-942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	136.66595121764	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTTACCTCAATAT	NA	False	NA	17	True	AATAAA	-27	NA	29825440	29849441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830198_29832612_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.14	chr2	+	3807	6	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	6	25	intron_retention	FALSE	canonical	3	461	junction_4	62.5287134043233	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825445	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29830349_29832549_29833850_29834000
ES.18678.15	chr2	+	2752	7	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	9	25	intron_retention	FALSE	canonical	2	11	junction_1	184.882620419912	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825448	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826106_29826250_29828506_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000
ES.18678.16	chr2	+	3334	15	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	11	-949	intron_retention	FALSE	canonical	0	0	junction_5	141.256316456205	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825450	29849434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829671_29830093_29830349_29832549_29832779_29833736_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.17	chr2	+	2835	7	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	11	25	intron_retention	FALSE	canonical	3	461	junction_4	57.0655081658108	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825450	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000
ES.18678.18	chr2	+	3603	15	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	11	-943	intron_retention	FALSE	canonical	3	458	junction_8	45.7078678530674	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGGTTACCTCAATA	NA	False	NA	16	True	AATAAA	-26	NA	29825450	29849440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.19	chr2	+	3075	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	12	-957	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	182.154830356546	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTGTCCTGATATG	NA	False	NA	2	True	AATAAA	-12	NA	29825451	29849426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830090_29830349_29832549_29832779_29833736_29833850_29834000_29834084_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.2	chr2	+	3105	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	-17	942	-17	-942	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTTACCTCAATAT	NA	False	NA	17	True	AATAAA	-27	NA	29825420	29849441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.20	chr2	+	2635	8	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	12	25	intron_retention	FALSE	canonical	3	461	junction_5	52.8764443523478	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825451	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000
ES.18678.21	chr2	+	4746	13	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	15	-953	intron_retention	FALSE	canonical	3	458	junction_6	49.3229155667019	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGATATGTGGT	NA	False	NA	6	True	AATAAA	-16	NA	29825454	29849430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829556_29830093_29830349_29832549_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.22	chr2	+	3563	13	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	15	438	intron_retention	FALSE	canonical	3	458	junction_6	48.8839328296005	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTCTGTCATTCTCTT	NA	False	NA	3	True	NA	NA	NA	29825454	29848667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.23	chr2	+	2054	9	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	168.466567528991	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29825462	29834776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000
ES.18678.24	chr2	+	4008	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	25	-3	23	3	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTGCATGCAGGTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	29825462	29850386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.25	chr2	+	3048	15	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	23	-942	intron_retention	FALSE	non_canonical	0	0	junction_5	141.140995505363	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTTACCTCAATAT	NA	False	NA	17	True	AATAAA	-27	NA	29825462	29849441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829556_29830093_29830198_29832612_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.27	chr2	+	3079	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	-949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.042803269512	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825467	29849434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829121_29829296_29829494_29829556_29830090_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.28	chr2	+	2327	15	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	709	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	132.657299775299	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCAGGTACTGTTTG	NA	False	NA	4	True	AATAAA	-17	NA	29825467	29848938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.3	chr2	+	3191	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	-8	-949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.182430704338	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATATGTGGTTACC	NA	False	NA	10	True	AATAAA	-20	NA	29825429	29849434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829671_29830090_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.30	chr2	+	2777	7	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	0	intron_retention	FALSE	canonical	3	40	junction_4	192.765833763836	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29825467	29834776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000
ES.18678.31	chr2	+	2899	15	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	436	intron_retention	FALSE	canonical	3	40	junction_6	130.523357828304	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGCCTCTGTCATTCTC	NA	False	NA	1	True	NA	NA	NA	29825467	29848665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761
ES.18678.32	chr2	+	2145	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	-957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	135.641127817324	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTGTCCTGATATG	NA	False	NA	2	True	AATAAA	-12	NA	29825467	29849426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847813_29849343
ES.18678.33	chr2	+	3776	6	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	28	25	intron_retention	FALSE	canonical	3	461	junction_4	62.0689938697253	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825467	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829556_29830093_29830349_29832549_29833850_29834000
ES.18678.34	chr2	+	2814	15	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	29	437	intron_retention	FALSE	canonical	1	2	junction_4	141.079601933209	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCTCTGTCATTCTCT	NA	False	NA	2	True	NA	NA	NA	29825468	29848666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830090_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.36	chr2	+	2833	8	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	29	25	intron_retention	FALSE	non_canonical	0	0	junction_6	192.801050043715	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825468	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830198_29832612_29833850_29834000
ES.18678.37	chr2	+	2326	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	29	379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.182430704338	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTCGTCAGTGTGTTT	NA	False	NA	-56	True	AATAAA	-41	NA	29825468	29848608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829671_29830090_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.38	chr2	+	2914	15	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	31	1718	29	436	intron_retention	FALSE	canonical	3	458	junction_9	45.2298551392592	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGCCTCTGTCATTCTC	NA	False	NA	1	True	NA	NA	NA	29825468	29848665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761
ES.18678.4	chr2	+	2127	9	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	-7	15582	-7	25	5prime_fragment	FALSE	canonical	3	461	junction_6	50.7444578254611	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGAATGTTGGAGACT	NA	False	NA	NA	False	NA	NA	NA	29825430	29834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000
ES.18678.40	chr2	+	3201	17	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	29	-951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	177.14814377732	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGATATGTGGTTA	NA	False	NA	8	True	AATAAA	-18	NA	29825468	29849432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29836587_29836741_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.42	chr2	+	3029	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	30	-950	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	135.479822195861	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTGATATGTGGTTAC	NA	False	NA	9	True	AATAAA	-19	NA	29825469	29849433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832568_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.43	chr2	+	3124	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	30	-951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.042803269512	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGATATGTGGTTA	NA	False	NA	8	True	AATAAA	-18	NA	29825469	29849432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829072_29829296_29829494_29829556_29830090_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.44	chr2	+	2180	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	34	356	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	127.209643240335	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGAAGAATCATGTCAGA	NA	False	NA	-79	True	AATAAA	-18	NA	29825473	29848585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.45	chr2	+	3144	17	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	39	-944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	177.144670749645	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGTGGTTACCTCAAT	NA	False	NA	15	True	AATAAA	-25	NA	29825478	29849439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29830997_29831113_29832565_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.47	chr2	+	3406	14	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	-45	-942	intron_retention	FALSE	canonical	0	0	junction_8	189.187987659249	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTTACCTCAATAT	NA	False	NA	17	True	AATAAA	-27	NA	29825489	29849441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830093_29830349_29832565_29832779_29833736_29833850_29834000_29834071_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.48	chr2	+	1920	14	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	3022	709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	138.682259971379	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCAGGTACTGTTTG	1171	False	NA	4	True	AATAAA	-17	NA	29828556	29848938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29828618_29829146_29829296_29829494_29829556_29830093_29830198_29832612_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.49	chr2	+	2702	1	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	-299	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4689	False	NA	NA	False	NA	NA	NA	29832074	29834776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29832100_29834800
ES.18678.50	chr2	+	3372	7	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	11782	951	-1822	-951	3prime_fragment	FALSE	canonical	3	480	junction_1	30.4544286142791	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCTGATATGTGGTTA	9834	False	NA	8	True	AATAAA	-18	NA	29837219	29849432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.6	chr2	+	852	3	FSM	ENSMUSG00000019715.15	ENSMUST00000154490.8	860	3	-7	15	-5	-15	multi-exon	FALSE	canonical	3	530	junction_2	57.5	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-26	NA	29825432	29828952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29825611_29826021_29826250_29828506
ES.18678.7	chr2	+	2588	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	-3	1445	-3	709	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCAGGTACTGTTTG	NA	False	NA	4	True	AATAAA	-17	NA	29825434	29848938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.8	chr2	+	8295	13	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	431	intron_retention	FALSE	canonical	3	461	junction_5	46.6106807025552	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTCACAGCCTCTGTCA	NA	False	NA	-4	True	NA	NA	NA	29825437	29848660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829556_29830093_29830349_29832549_29833850_29834000_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18678.9	chr2	+	3801	14	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	-957	intron_retention	FALSE	canonical	3	458	junction_7	47.4300481494128	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCTGTCCTGATATG	NA	False	NA	2	True	AATAAA	-12	NA	29825437	29849426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29825611_29826021_29826250_29828506_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ES.18679.1	chr2	+	4394	23	Fusion	ENSMUSG00000054766.14_ENSMUSG00000057738.15	novel	7820	55	NA	NA	-310	155	multi-exon	FALSE	canonical	0	0	junction_20	4761.30687425485	7709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGAGCCCTGACACT	NA	False	NA	19	True	AATAAA	-15	NA	29855261	29961596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29960196_29960368_29960452_29960600_29960930
ES.18679.10	chr2	+	10269	53	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-152	0	intron_retention	FALSE	canonical	0	0	junction_23	101.53144461477	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855419	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.100	chr2	+	3993	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	185	-1354	185	1354	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTATGTGTGTTGGT	NA	False	NA	10	True	NA	NA	NA	29952049	29963943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.102	chr2	+	1052	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	204	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5816.56168511387	7091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952068	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952167_29958276_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.104	chr2	+	3261	9	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	210	1353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5496.39693202511	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTATGTGTGTTGG	NA	False	NA	9	True	NA	NA	NA	29952074	29963942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930_29963092_29963797
ES.18679.106	chr2	+	2545	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	210	362	intron_retention	FALSE	canonical	1	342	junction_5	6472.04056229564	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGACCTGATGCTTTTC	NA	False	NA	12	True	AATAAA	-14	NA	29952074	29961803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29959115_29959338_29959644_29960196_29960368_29960452_29960600_29960933
ES.18679.107	chr2	+	1117	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	220	13	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	7091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952084	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.108	chr2	+	1832	3	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	226	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7911.5	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGGACTGGGGTCAT	NA	False	NA	9	True	AATAAA	-14	NA	29952090	29962579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952118_29960443_29960600_29960930
ES.18679.110	chr2	+	1543	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	241	149	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	7153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGATGACTTGAGCCCT	NA	False	NA	13	True	AATAAA	-9	NA	29952105	29961590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.112	chr2	+	2437	7	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	245	-4	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_3	6009.56758473982	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952109	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959563_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.114	chr2	+	4323	27	Fusion	ENSMUSG00000054766.14_ENSMUSG00000026785.15	novel	2824	8	NA	NA	245	0	intron_retention	TRUE	canonical	0	0	junction_7	6678.25303009879	7360	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGGTTGTGTAGTGTC	NA	False	NA	21	True	AATAAA	-23	NA	29952109	29981031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29969545_29969775_29969943_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.116	chr2	+	2124	7	ISM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	246	785	246	363	intron_retention	FALSE	canonical	3	11761	junction_1	1971.89364712085	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29952110	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ES.18679.117	chr2	+	2562	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5816.56168511387	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29952110	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952286_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.118	chr2	+	2560	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7115.4600436411	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29952110	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959344_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960933
ES.18679.124	chr2	+	2135	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6637.28493060227	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	False	NA	18	True	AATAAA	-23	NA	29952110	29962588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959053_29960443_29960600_29960930
ES.18679.125	chr2	+	1003	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5820.02390415177	7091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952110	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29961018
ES.18679.126	chr2	+	8593	7	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	246	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	6246.2201547994	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29952110	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29955356_29955406_29958339_29958971_29959115_29959338_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.127	chr2	+	1138	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6637.28493060227	7153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTTGAGCCCTGACA	NA	False	NA	17	True	AATAAA	-13	NA	29952110	29961594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959053_29960446_29960600_29960930
ES.18679.130	chr2	+	2559	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5767.55654413513	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	False	NA	18	True	AATAAA	-23	NA	29952110	29962588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958989_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.132	chr2	+	1819	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	368	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	5660.57792895707	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGATGCTTTTCTGTCAA	NA	False	NA	18	True	AATAAA	-20	NA	29952110	29961809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960431_29960600_29960930
ES.18679.133	chr2	+	1752	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	363	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29952110	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.134	chr2	+	2805	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	3	intron_retention	FALSE	canonical	3	11761	junction_1	1836.78427481896	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCATTCTCCTTGTTTTG	NA	False	NA	22	True	AATAAA	-27	NA	29952110	29962592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.135	chr2	+	994	7	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	246	13	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_3	6009.56758473982	7091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952110	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959563_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.136	chr2	+	2283	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	247	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6461.4581945564	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	False	NA	18	True	AATAAA	-23	NA	29952111	29962588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959426_29960443_29960600_29960930
ES.18679.137	chr2	+	2530	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7108.65382933408	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29952112	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958996_29959115_29959350_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.138	chr2	+	1776	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5820.02390415177	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29952112	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960614_29960959
ES.18679.140	chr2	+	2329	7	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7661.23432178741	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGGGGTCATTCT	NA	False	NA	12	True	AATAAA	-17	NA	29952112	29962582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959426_29960302_29960368_29960452_29960600_29960933
ES.18679.142	chr2	+	1288	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6461.4581945564	7153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTTGAGCCCTGACA	NA	False	NA	17	True	AATAAA	-13	NA	29952112	29961594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959426_29960443_29960600_29960930
ES.18679.143	chr2	+	2164	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6637.28493060227	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959087_29960443_29960600_29960930
ES.18679.145	chr2	+	1783	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	361	at_least_one_novel_splicesite	FALSE	canonical	1	114	junction_1	5777.0385994549	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGACCTGATGCTTTT	NA	False	NA	11	True	AATAAA	-13	NA	29952112	29961802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958286_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.146	chr2	+	2466	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	at_least_one_novel_splicesite	FALSE	canonical	1	58	junction_5	5812.35633133835	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960302_29960368_29960452_29960600_29960930
ES.18679.147	chr2	+	8058	4	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	248	9	intron_retention	FALSE	canonical	3	15604	junction_1	948.681306984712	7089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAAAAGAATCTCCGTTT	NA	False	NA	-3	True	AATACA	-2	NA	29952112	29961139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.148	chr2	+	1119	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	intron_retention	TRUE	non_canonical	0	0	junction_5	6438.27835372159	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959644_29960196_29960368_29962323
ES.18679.149	chr2	+	2493	7	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7522.6699031808	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952112	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959092_29959466_29959651_29960214_29960368_29960452_29960600_29960930
ES.18679.15	chr2	+	7842	54	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-8	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	109.385864511511	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTTGTGGGACCCAGA	NA	False	NA	NA	False	AATAAA	-20	NA	29855563	29921318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917691_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.150	chr2	+	2534	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-1	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	False	NA	18	True	AATAAA	-23	NA	29952112	29962588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.151	chr2	+	2291	9	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5496.39693202511	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952112	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930_29961349_29961625
ES.18679.152	chr2	+	2740	6	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-8	intron_retention	FALSE	canonical	3	11761	junction_1	1949.10681082387	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952112	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959644_29960196_29960600_29960930
ES.18679.153	chr2	+	1354	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6637.28493060227	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGATGCTTTTCTGTCAA	NA	False	NA	18	True	AATAAA	-20	NA	29952112	29961809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959053_29960443_29960600_29960930
ES.18679.156	chr2	+	2411	7	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6027.30970020806	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGGGTCATTCTCCTT	NA	False	NA	16	True	AATAAA	-21	NA	29952112	29962586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960443_29960600_29960930
ES.18679.158	chr2	+	3818	9	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	1353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5496.39693202511	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTATGTGTGTTGG	NA	False	NA	9	True	NA	NA	NA	29952112	29963942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930_29963701_29963811
ES.18679.159	chr2	+	3219	6	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	3	intron_retention	FALSE	canonical	3	11761	junction_1	2156.29929276991	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCATTCTCCTTGTTTTG	NA	False	NA	22	True	AATAAA	-27	NA	29952112	29962592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29960368_29960452_29960600_29960930
ES.18679.16	chr2	+	7884	54	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	101.646355016174	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855628	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893448_29894510_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.160	chr2	+	2410	9	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5496.39693202511	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930_29961329_29961490
ES.18679.163	chr2	+	3436	5	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	intron_retention	FALSE	canonical	3	11761	junction_1	2247.8651399717	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29960368_29960452_29960600_29960930
ES.18679.164	chr2	+	3790	9	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	1354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5496.39693202511	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTATGTGTGTTGGT	NA	False	NA	10	True	NA	NA	NA	29952112	29963943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930_29963712_29963851
ES.18679.166	chr2	+	1387	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	7122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29952112	29961441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.167	chr2	+	1804	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	152	intron_retention	FALSE	canonical	3	11761	junction_1	1836.78427481896	7153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGACTTGAGCCCTGAC	NA	False	NA	16	True	AATAAA	-12	NA	29952112	29961593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.169	chr2	+	1120	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5661.24743951619	7091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952112	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960358_29960452_29960600_29960930
ES.18679.17	chr2	+	4211	29	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-47	213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	60.8942291424823	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATGTAAGAAACTGTT	NA	False	NA	NA	False	NA	NA	NA	29855641	29898327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085
ES.18679.170	chr2	+	2439	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	248	137	248	-137	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATAGGCAAAGTGTAAC	NA	False	NA	NA	False	TATAAA	-23	NA	29952112	29962452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.171	chr2	+	2186	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6508.61984141031	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29952112	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959053_29960302_29960368_29960452_29960600_29960930
ES.18679.172	chr2	+	828	6	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6461.4581945564	7091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAATCTCCGTTTCTGT	NA	False	NA	1	True	AATACA	-6	NA	29952112	29961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959426_29960452_29960600_29960930
ES.18679.173	chr2	+	2466	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-6	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	6051.45598641811	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTGGGGTCATTCTC	NA	False	NA	13	True	AATAAA	-18	NA	29952112	29962583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.175	chr2	+	1106	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7211.4883883641	7089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACAACAGGAAAAGAA	NA	False	NA	-12	True	NA	NA	NA	29952112	29961130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958331_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960933
ES.18679.176	chr2	+	1775	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5820.02390415177	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29952112	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960584_29960930
ES.18679.179	chr2	+	2574	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	-16	at_least_one_novel_splicesite	FALSE	canonical	2	1321	junction_7	5383.05377256881	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTTTTTGGACTGG	NA	False	NA	3	True	AATAAA	-8	NA	29952112	29962573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960614_29960930
ES.18679.180	chr2	+	3137	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	248	-561	248	561	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGGCCAGCCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	29952112	29963150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.184	chr2	+	2555	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	249	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5816.56168511387	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGGGGTCATTCT	NA	False	NA	12	True	AATAAA	-17	NA	29952113	29962582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952280_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.186	chr2	+	1783	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	251	368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5820.02390415177	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGATGCTTTTCTGTCAA	NA	False	NA	18	True	AATAAA	-20	NA	29952115	29961809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960590_29960930
ES.18679.187	chr2	+	2069	5	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	304	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6637.28493060227	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGGACTGGGGTCAT	NA	False	NA	9	True	AATAAA	-14	NA	29952168	29962579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959063_29960452_29960600_29960930
ES.18679.188	chr2	+	3083	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	366	-8	intron_retention	FALSE	canonical	3	11761	junction_1	1939.7141900004	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952230	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29952293_29958280_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.189	chr2	+	1776	8	NNC	ENSMUSG00000054766.14	novel	844	3	NA	NA	-214	363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5816.56168511387	7168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29952398	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952564_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.190	chr2	+	3138	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-296	-8	-296	8	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTTGTTTTGTAGTG	NA	False	NA	27	True	AATAAA	-32	NA	29956171	29962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.191	chr2	+	2098	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-249	985	-249	163	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTGACACTCAATGGGA	NA	False	NA	27	True	AATAAA	-23	NA	29956218	29961604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.192	chr2	+	1644	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-220	1410	-220	49	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTCTTGTCTAAATTT	NA	False	NA	37	True	AATACA	-42	NA	29956247	29961179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.193	chr2	+	2259	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-203	778	-203	370	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCTTTTCTGTCAACA	NA	False	NA	20	True	AATAAA	-22	NA	29956264	29961811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.194	chr2	+	2914	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6677.65557662268	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29956437	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958397_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.195	chr2	+	1706	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-20	1148	-20	0	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29956447	29961441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.196	chr2	+	2836	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	-14	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6741.60868284811	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTTGTTTTGTA	NA	False	NA	24	True	AATAAA	-29	NA	29956453	29962594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960583_29960930
ES.18679.197	chr2	+	2925	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	-12	-8	intron_retention	FALSE	canonical	3	3891	junction_1	4810.34778426213	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29956455	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.198	chr2	+	2804	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	6398.9060417084	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	False	NA	18	True	AATAAA	-23	NA	29956455	29962588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.199	chr2	+	4198	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	-11	-1353	-11	1353	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTATGTGTGTTGG	NA	False	NA	9	True	NA	NA	NA	29956456	29963942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.2	chr2	+	8198	54	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-248	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_24	101.646355016174	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTCCTCTTTATCTA	NA	False	NA	22	True	AATAAA	-22	NA	29855323	29921464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.20	chr2	+	7791	53	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	110.309360235754	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855688	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915078_29915990_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.205	chr2	+	2812	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	6753.61162336003	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29956468	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959426_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.206	chr2	+	2018	9	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	1	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6406.28464746728	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29956468	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956476_29956505_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.208	chr2	+	4514	5	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	2	-4	intron_retention	FALSE	canonical	3	15604	junction_2	827.119852258426	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGGGGTCATTCTCCT	NA	False	NA	15	True	AATAAA	-20	NA	29956469	29962585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29958339_29958971_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.210	chr2	+	3921	4	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	15823	junction_3	777.267435743108	7122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29956471	29961441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29958339_29958971_29960368_29960452_29960600_29960930
ES.18679.212	chr2	+	1951	7	ISM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	6	1208	6	-60	intron_retention	FALSE	canonical	3	3891	junction_1	4802.82389155935	7120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACATGTATCTGTCTAC	NA	False	NA	NA	False	AATACA	-15	NA	29956473	29961381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ES.18679.214	chr2	+	1706	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	9	-58	intron_retention	FALSE	canonical	3	3891	junction_1	4810.34778426213	7120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATGTATCTGTCTACTT	NA	False	NA	NA	False	AATACA	-17	NA	29956476	29961383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.215	chr2	+	1789	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	9	153	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	6398.9060417084	7153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTTGAGCCCTGACA	NA	False	NA	17	True	AATAAA	-13	NA	29956476	29961594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.216	chr2	+	1636	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	6398.9060417084	7122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29956476	29961441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.218	chr2	+	5118	5	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	12	1352	intron_retention	FALSE	canonical	3	3891	junction_1	5470.51891391484	7214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTATGTGTGTTG	NA	False	NA	8	True	NA	NA	NA	29956479	29963941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.219	chr2	+	2264	4	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	14	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6732.01170197702	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTTTGGACTGGGGT	NA	False	NA	6	True	AATAAA	-11	NA	29956481	29962576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958319_29960443_29960600_29960930
ES.18679.220	chr2	+	2828	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6756.83879714562	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCATTCTCCTTGTTT	NA	False	NA	20	True	AATAAA	-25	NA	29956481	29962590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959651_29960196_29960368_29960452_29960600_29960930
ES.18679.221	chr2	+	1817	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	15	158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6741.60868284811	7153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGCCCTGACACTCAA	NA	False	NA	22	True	AATAAA	-18	NA	29956482	29961599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960942
ES.18679.222	chr2	+	1610	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	16	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6741.60868284811	7120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATCTGTCTACTTTCTC	NA	False	NA	NA	False	AATACA	-21	NA	29956483	29961387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960594_29960930
ES.18679.223	chr2	+	1315	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	6398.9060417084	7089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACAACAGGAAAAGAA	NA	False	NA	-12	True	NA	NA	NA	29956486	29961130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
ES.18679.224	chr2	+	2702	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	20	-8	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	6947.65468821434	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29956487	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.225	chr2	+	3628	6	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	20	363	intron_retention	FALSE	canonical	3	15604	junction_3	804.225689716512	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29956487	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29958339_29958971_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.226	chr2	+	2044	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	21	363	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6677.39242152357	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29956488	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958955_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.229	chr2	+	2339	5	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	35	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7270.15560356173	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29956502	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959053_29960452_29960600_29960930
ES.18679.23	chr2	+	7830	53	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	110.164387656322	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855689	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917161_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.230	chr2	+	2570	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	35	366	intron_retention	FALSE	canonical	3	3891	junction_1	4812.04297396993	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGATGCTTTTCTGTC	NA	False	NA	16	True	AATAAA	-18	NA	29956502	29961807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29960368_29960452_29960600_29960930
ES.18679.232	chr2	+	1984	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	40	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6741.60868284811	7168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACCTGATGCTTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	29956507	29961804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960614_29960969
ES.18679.234	chr2	+	2997	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	62	1	intron_retention	FALSE	canonical	3	3891	junction_1	4674.66966450275	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCATTCTCCTTGTTT	NA	False	NA	20	True	AATAAA	-25	NA	29956529	29962590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29956906_29958280_29958339_29958971_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.235	chr2	+	2634	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	85	-9	at_least_one_novel_splicesite	FALSE	canonical	1	58	junction_5	6741.59288995394	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGACTGGGGTCATT	NA	False	NA	10	True	AATAAA	-15	NA	29956552	29962580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960302_29960368_29960452_29960600_29960930
ES.18679.236	chr2	+	3380	4	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	-175	-63	intron_retention	FALSE	canonical	3	15604	junction_1	948.681306984712	7120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAACATGTATCTGTC	NA	False	NA	NA	False	AATACA	-12	NA	29957029	29961378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.237	chr2	+	2823	7	NIC	ENSMUSG00000054766.14	novel	952	5	NA	NA	-18	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7770.81121355207	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAAAGATTTTTTTTGG	NA	False	NA	-2	True	AATAAA	-3	NA	29957186	29962568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29957739_29958280_29958339_29958971_29959115_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.238	chr2	+	3490	3	FSM	ENSMUSG00000054766.14	ENSMUST00000147590.2	844	3	-2703	57	274	-57	multi-exon	FALSE	canonical	3	15823	junction_2	947	7120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTATCTGTCTACTTT	NA	False	NA	NA	False	AATACA	-18	NA	29957478	29961384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29960368_29960452_29960600_29960930
ES.18679.239	chr2	+	982	3	FSM	ENSMUSG00000054766.14	ENSMUST00000147590.2	844	3	13	-151	13	151	multi-exon	FALSE	canonical	3	15823	junction_2	947	7149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGACTTGAGCCCTGA	NA	False	NA	15	True	AATAAA	-11	NA	29960194	29961592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29960368_29960452_29960600_29960930
ES.18679.241	chr2	+	3083	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-57	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	19.7860437769826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1261	False	NA	25	True	AATAAA	-27	NA	29967638	29981035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.242	chr2	+	3120	21	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	0	intron_retention	FALSE	canonical	3	77	junction_7	19.6491730105875	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1303	False	NA	24	True	AATAAA	-26	NA	29967680	29981034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.243	chr2	+	3048	21	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-6	0	intron_retention	FALSE	canonical	2	4	junction_3	31.3318926973779	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1312	False	NA	15	True	AATAAA	-17	NA	29967689	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970030_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.244	chr2	+	2954	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.2023494190316	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCCAGGGGTTGTG	1313	False	NA	14	True	AATAAA	-16	NA	29967690	29981024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970030_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972963_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.245	chr2	+	3613	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-4	1	intron_retention	FALSE	canonical	3	77	junction_6	20.0504902848988	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1314	False	NA	25	True	AATAAA	-27	NA	29967691	29981035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.246	chr2	+	3048	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.4182522741753	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCCAGGGGTTGTG	1314	False	NA	14	True	AATAAA	-16	NA	29967691	29981024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979821_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.247	chr2	+	3533	21	FSM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	-63	-10	-4	1	multi-exon	FALSE	canonical	3	77	junction_6	20.1955440629858	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1314	False	NA	25	True	AATAAA	-27	NA	29967691	29981035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.249	chr2	+	2408	11	ISM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	-44	5466	15	0	intron_retention	FALSE	canonical	3	77	junction_6	20.0049993751562	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATAGTGACTCCATT	1333	False	NA	NA	False	NA	NA	NA	29967710	29975559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194
ES.18679.250	chr2	+	3308	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.4742092885609	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1353	False	NA	24	True	AATAAA	-26	NA	29967730	29981034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973713_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.251	chr2	+	3662	20	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-23	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	32.8028611683649	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCCAGGGGTTGTG	1354	False	NA	14	True	AATAAA	-16	NA	29967731	29981024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978778_29979743_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.252	chr2	+	3398	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-16	-1	intron_retention	TRUE	canonical	0	0	junction_16	33.0260536789767	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCCAGGGGTTGTG	1361	False	NA	14	True	AATAAA	-16	NA	29967738	29981024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.253	chr2	+	3646	19	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	81	junction_8	18.2611373085706	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGGGTTGTGTAGTG	1361	False	NA	19	True	AATAAA	-21	NA	29967738	29981029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.254	chr2	+	3376	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-16	1	intron_retention	FALSE	canonical	0	0	junction_6	31.886398076162	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1361	False	NA	25	True	AATAAA	-27	NA	29967738	29981035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.255	chr2	+	2909	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	38.65429077103	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1362	False	NA	15	True	AATAAA	-17	NA	29967739	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970030_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980351_29980424_29980534
ES.18679.256	chr2	+	3724	18	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	81	junction_8	17.6750757989399	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGGGTTGTGTAGTG	1363	False	NA	19	True	AATAAA	-21	NA	29967740	29981029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.257	chr2	+	3408	19	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_7	33.6329130392563	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1368	False	NA	15	True	AATAAA	-17	NA	29967745	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29974702_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.258	chr2	+	2888	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	30.8281021486268	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTGTAGTGTCTAGG	1369	False	NA	25	True	AATAAA	-27	NA	29967746	29981035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979989_29980161_29980188_29980342_29980424_29980534
ES.18679.259	chr2	+	3550	20	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-7	0	intron_retention	FALSE	canonical	3	77	junction_6	20.3663129604037	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1370	False	NA	15	True	AATAAA	-17	NA	29967747	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.260	chr2	+	3654	21	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-7	-4	intron_retention	FALSE	canonical	1	8	junction_1	30.4942617552877	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCCAGGCCAGGGGTT	1370	False	NA	11	True	AATAAA	-13	NA	29967747	29981021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29968003_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.261	chr2	+	2902	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	30.8095606093841	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1378	False	NA	15	True	AATAAA	-17	NA	29967755	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970030_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.262	chr2	+	3031	21	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	3	-1	intron_retention	FALSE	canonical	3	77	junction_6	20.2558633486702	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTTGTGTAGTGTCTA	1380	False	NA	23	True	AATAAA	-25	NA	29967757	29981033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.263	chr2	+	3425	20	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	4	-5	intron_retention	FALSE	canonical	0	0	junction_11	32.7894314437508	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGCCAGGCCAGGGGT	1381	False	NA	10	True	AATAAA	-12	NA	29967758	29981020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975334_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.264	chr2	+	3168	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0738276760349	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCCAGGCCAGGGGTT	1405	False	NA	11	True	AATAAA	-13	NA	29967782	29981021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29968055_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.265	chr2	+	3185	22	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0738276760349	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1426	False	NA	24	True	AATAAA	-26	NA	29967803	29981034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29968080_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.266	chr2	+	3175	22	FSM	ENSMUSG00000026785.15	ENSMUST00000045246.8	3113	22	-68	6	-68	0	multi-exon	FALSE	canonical	2	22	junction_1	27.5708117374869	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	2150	False	NA	15	True	AATAAA	-17	NA	29968527	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29968803_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.267	chr2	+	3645	21	FSM	ENSMUSG00000026785.15	ENSMUST00000137240.8	3449	21	-206	10	-36	-1	multi-exon	FALSE	canonical	2	22	junction_1	28.2455306199052	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCCAGGGGTTGTG	2182	False	NA	14	True	AATAAA	-16	NA	29968559	29981024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29968803_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.268	chr2	+	3595	19	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	666	0	intron_retention	FALSE	canonical	3	81	junction_8	18.8418532023462	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	3054	False	NA	15	True	AATAAA	-17	NA	29969431	29981025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.269	chr2	+	3006	21	NNC	ENSMUSG00000026785.15	novel	3113	22	NA	NA	668	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.4219668385033	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCCAGGCCAGGGGTT	3056	False	NA	11	True	AATAAA	-13	NA	29969433	29981021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29969775_29969937_29970084_29970586_29970699_29970767_29970894_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.27	chr2	+	8643	52	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_23	101.814533118664	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855689	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.270	chr2	+	3561	19	NIC	ENSMUSG00000026785.15	novel	3449	21	NA	NA	706	-2	intron_retention	FALSE	canonical	3	77	junction_5	20.24914264303	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCAGGGGTTGTGTAGTG	3094	False	NA	19	True	AATAAA	-21	NA	29969471	29981029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.271	chr2	+	2929	21	NNC	ENSMUSG00000026785.15	novel	3113	22	NA	NA	739	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.2062176191481	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCAGGCCAGGGGTTGT	3127	False	NA	13	True	AATAAA	-15	NA	29969504	29981023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972963_29973052_29973163_29973250_29973395_29974702_29974779_29974859_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.274	chr2	+	1777	13	NNC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	-1414	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.3409920001267	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCCAGGCCAGGGGTT	6873	False	NA	11	True	AATAAA	-13	NA	29973250	29981021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29977036_29977214_29978531_29978595_29978707_29978785_29979821_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.275	chr2	+	1284	9	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	191	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.0896246982728	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCCAGGCCAGGGGTT	8478	False	NA	11	True	AATAAA	-13	NA	29974855	29981021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29975025_29976448_29976513_29976643_29976736_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ES.18679.276	chr2	+	4944	1	Genic_Genomic	ENSMUSG00000026785.15	novel	NA	NA	NA	NA	6256	4830	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTATTTATTTGTACT	745	False	NA	NA	False	NA	NA	NA	29980920	29985864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_29980900_29985900
ES.18679.28	chr2	+	7894	54	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	126.551911318854	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAAAGGCTTTGCTCCTC	NA	False	NA	14	True	AATAAA	-14	NA	29855689	29921456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905944_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29919604_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.29	chr2	+	8232	52	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_24	98.4706741318216	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855689	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29920209_29920328_29920383_29920463_29920835_29920982
ES.18679.31	chr2	+	7873	55	NNC	ENSMUSG00000057738.15	novel	7892	57	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	120.138410403671	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGGCTTTGCTCCTCT	NA	False	NA	15	True	AATAAA	-15	NA	29855689	29921457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908571_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.32	chr2	+	3877	1	FSM	ENSMUSG00000057738.15	ENSMUST00000202286.2	1471	1	-1	-2405	1	2405	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29855689	29859566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29855700_29859600
ES.18679.33	chr2	+	7978	57	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	1	19352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	132.317490783898	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACCAGCTCAATA	NA	False	NA	NA	False	NA	NA	NA	29855689	29940815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889272_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982_29921462_29929278_29929315_29940761
ES.18679.34	chr2	+	7898	55	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	120.186320830108	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855690	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905592_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.35	chr2	+	7297	51	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	117.312111906657	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855691	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911282_29916521_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.36	chr2	+	7837	55	NNC	ENSMUSG00000057738.15	novel	7958	56	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	117.387901464124	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855691	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893455_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.4	chr2	+	8202	55	NNC	ENSMUSG00000057738.15	novel	7958	56	NA	NA	-238	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	117.387901464124	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855333	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.40	chr2	+	8168	55	NNC	ENSMUSG00000057738.15	novel	7892	57	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	119.895246058527	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGGCTTTGCTCCTCT	NA	False	NA	15	True	AATAAA	-15	NA	29855694	29921457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878057_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.41	chr2	+	7884	55	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	115.816148768212	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855699	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29918655_29918719_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.44	chr2	+	7718	53	NNC	ENSMUSG00000057738.15	novel	7892	57	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	101.935955282177	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGGCTTTGCTCCTCT	NA	False	NA	15	True	AATAAA	-15	NA	29868387	29921457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.45	chr2	+	7662	52	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	110.746011077723	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29868439	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29919623_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.49	chr2	+	7279	51	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	3535	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	113.98727823753	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTCCTCTTTATCTA	4114	False	NA	22	True	AATAAA	-22	NA	29873623	29921464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.5	chr2	+	10112	54	NNC	ENSMUSG00000057738.15	novel	7958	56	NA	NA	-177	0	intron_retention	FALSE	canonical	0	0	junction_24	117.534594560395	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855394	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.50	chr2	+	10372	43	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-5221	0	intron_retention	FALSE	canonical	0	0	junction_16	101.463843632231	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	7237	False	NA	21	True	AATAAA	-21	NA	29876746	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29916233_29916532_29916830_29917030_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.52	chr2	+	4127	12	NIC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-5057	5804	intron_retention	FALSE	canonical	3	229	junction_7	25.4642838514284	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGTGTGAGGTCTC	7401	False	NA	NA	False	NA	NA	NA	29876910	29889853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886967_29888167_29888261_29889137
ES.18679.53	chr2	+	6614	46	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-3578	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	118.245185739705	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	8880	False	NA	21	True	AATAAA	-21	NA	29878389	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917691_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920604_29920686_29920835_29920982
ES.18679.54	chr2	+	6383	43	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	124.560909068725	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29881867	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916536_29916830_29917030_29917144_29919623_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.55	chr2	+	6422	45	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	-69	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	136.243862171251	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAAAGGCTTTGCTCCTC	NA	False	NA	14	True	AATAAA	-14	NA	29881898	29921456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889274_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906089_29907215_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.56	chr2	+	6263	44	NIC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	101.337422113481	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29881974	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.57	chr2	+	6270	44	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	719	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	126.232943736451	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	698	False	NA	21	True	AATAAA	-21	NA	29882686	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920372_29920463_29920611_29920686_29920835_29920982
ES.18679.61	chr2	+	5600	38	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	3531	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	117.270958557369	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	3510	False	NA	21	True	AATAAA	-21	NA	29885498	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.62	chr2	+	3998	2	ISM	ENSMUSG00000057738.15	ENSMUST00000129241.3	7585	57	17270	31378	3694	5769	intron_retention	FALSE	canonical	3	231	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3673	False	NA	NA	False	NA	NA	NA	29885661	29889818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29886277_29886435
ES.18679.64	chr2	+	5220	38	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	4570	19356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	115.665224332102	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACCAGCTCAATAAAGA	4549	False	NA	NA	False	NA	NA	NA	29886537	29940819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982_29921461_29940777
ES.18679.65	chr2	+	5171	37	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	4571	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	117.205172535754	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	4550	False	NA	21	True	AATAAA	-21	NA	29886538	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901111_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.66	chr2	+	5234	38	NNC	ENSMUSG00000057738.15	novel	7892	57	NA	NA	4779	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	142.0880034713	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	4758	False	NA	18	True	AATAAA	-18	NA	29886746	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.67	chr2	+	5159	36	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	4779	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	99.1952681557432	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	4758	False	NA	18	True	AATAAA	-18	NA	29886746	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.68	chr2	+	5126	36	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	4869	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	116.595459707871	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	4848	False	NA	21	True	AATAAA	-21	NA	29886836	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917588_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.69	chr2	+	5022	35	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	4928	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	132.059481853462	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	4907	False	NA	21	True	AATAAA	-21	NA	29886895	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915078_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29919608_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.7	chr2	+	8140	55	NNC	ENSMUSG00000057738.15	novel	7958	56	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	128.589525693074	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855404	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885593_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920215_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.71	chr2	+	4718	34	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-2639	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.152547854583	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	26	False	NA	18	True	AATAAA	-18	NA	29889256	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29889273_29889925_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897589_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.72	chr2	+	4688	33	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-1955	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	99.5436265852817	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGCTTTGCTCCTCTTT	121	False	NA	17	True	AATAAA	-17	NA	29889940	29921459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917161_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.73	chr2	+	4692	33	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-1951	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.923571852816	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGGCTTTGCTCCTCTT	125	False	NA	16	True	AATAAA	-16	NA	29889944	29921458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29890075_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916239_29916536_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.74	chr2	+	5763	31	NNC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-442	0	intron_retention	FALSE	canonical	0	0	junction_2	98.9636072278874	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	589	False	NA	18	True	AATAAA	-18	NA	29891453	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.76	chr2	+	4317	32	NIC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-413	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_25	114.538870981256	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	623	False	NA	21	True	AATAAA	-21	NA	29893686	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29918655_29918719_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.77	chr2	+	3909	26	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	42389	3	3984	0	3prime_fragment	FALSE	canonical	3	336	junction_2	63.7182046200299	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	5020	False	NA	18	True	AATAAA	-18	NA	29898083	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.78	chr2	+	3727	26	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	42451	123	4046	-117	3prime_fragment	FALSE	canonical	3	336	junction_2	63.7182046200299	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGAGCCAGCTGCCC	5082	False	NA	NA	False	AATAAA	-42	NA	29898145	29921340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.79	chr2	+	6107	22	NIC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	6691	0	intron_retention	FALSE	canonical	3	336	junction_1	61.6275846003514	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	7727	False	NA	21	True	AATAAA	-21	NA	29900790	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29916233_29916532_29916830_29917030_29917144_29917642_29919687_29920011_29920209_29920328_29920383_29920463_29920835_29920982
ES.18679.8	chr2	+	8164	54	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	119.288692242105	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	False	NA	18	True	AATAAA	-18	NA	29855412	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917161_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.80	chr2	+	3623	23	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	6819	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	108.553562968047	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAAAGGCTTTGCTCCTC	7855	False	NA	14	True	AATAAA	-14	NA	29900918	29921456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917161_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.81	chr2	+	3628	24	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	45224	3	6819	0	3prime_fragment	FALSE	canonical	3	342	junction_1	61.8830838602354	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	7855	False	NA	18	True	AATAAA	-18	NA	29900918	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.83	chr2	+	3133	21	NNC	ENSMUSG00000057738.15	novel	7820	55	NA	NA	-8035	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	139.24345586059	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	215	False	NA	21	True	AATAAA	-21	NA	29903797	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29918636_29918719_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.86	chr2	+	2187	14	ISM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	55507	3	-631	0	3prime_fragment	FALSE	canonical	3	402	junction_2	46.684513352741	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	7619	False	NA	18	True	AATAAA	-18	NA	29911201	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.87	chr2	+	3145	14	NIC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-614	-1	intron_retention	FALSE	canonical	3	10	junction_8	131.163793892989	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGCTTTGCTCCTCTTT	7636	False	NA	17	True	AATAAA	-17	NA	29911218	29921459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29918655_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.88	chr2	+	3766	10	NIC	ENSMUSG00000057738.15	novel	8018	57	NA	NA	-2043	0	intron_retention	FALSE	canonical	3	422	junction_5	43.9455330670048	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	1085	False	NA	18	True	AATAAA	-18	NA	29915532	29921460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.9	chr2	+	8163	55	NNC	ENSMUSG00000057738.15	novel	7883	56	NA	NA	-154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	112.180954397315	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855417	29921463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893462_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ES.18679.90	chr2	+	157	1	Intergenic	novelGene_15497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATATGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	29931841	29931998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29931800_29932000
ES.18679.91	chr2	+	317	1	Intergenic	novelGene_15498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATACACAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	29934172	29934489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29934200_29934500
ES.18679.92	chr2	+	173	1	Intergenic	novelGene_15499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29945850	29946023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_29945800_29946000
ES.18679.93	chr2	+	1621	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	55	1148	55	0	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29951919	29961441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.94	chr2	+	1939	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	110	775	110	373	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTTCTGTCAACAGAT	NA	False	NA	23	True	AATAAA	-25	NA	29951974	29961814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.95	chr2	+	2699	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	110	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5692.83046417839	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTCCTTGTTTTGTAG	NA	False	NA	25	True	AATAAA	-30	NA	29951974	29962595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959107_29959351_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.96	chr2	+	1283	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	124	1417	124	42	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTATCCTTTCTTGTC	NA	False	NA	30	True	AATACA	-35	NA	29951988	29961172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.97	chr2	+	1739	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	130	955	130	193	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTATGGTTTTATTTG	NA	False	NA	57	True	NA	NA	NA	29951994	29961634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.98	chr2	+	2658	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	174	-8	174	8	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTTGTTTTGTAGTG	NA	False	NA	27	True	AATAAA	-32	NA	29952038	29962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ES.18679.99	chr2	+	2623	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	177	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	7151.72110867912	7213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGACTGGGGTCATTC	NA	False	NA	11	True	AATAAA	-16	NA	29952041	29962581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960459_29960591_29960930
ES.1868.3	chr1	-	2034	7	NNC	ENSMUSG00000059498.14	novel	1347	5	NA	NA	-1073	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	70.2608236027257	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCTCCTTTTGGTGA	NA	False	NA	-8	True	AATAAA	-23	NA	170893577	170878743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154_170886176_170886837_170886964_170887195_170887296_170892981
ES.1868.4	chr1	-	1119	3	NNC	ENSMUSG00000059498.14	novel	1298	3	NA	NA	1224	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAAGGATCTCCTTTTGG	1060	False	NA	-11	True	AATAAA	-20	NA	170884399	170878746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_170879422_170881507_170881763_170884210
ES.18680.1	chr2	-	679	1	Intergenic	novelGene_15484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTTTCCGATGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	29717282	29716603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29716600_29717300
ES.18681.1	chr2	-	1377	1	Intergenic	novelGene_15485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29725579	29724202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29724200_29725600
ES.18682.1	chr2	-	617	1	FSM	ENSMUSG00000065485.3	ENSMUST00000083551.3	97	1	85	-605	85	605	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAACAACAACAACAA	8993	False	NA	NA	False	NA	NA	NA	29735654	29735037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29735000_29735700
ES.18683.1	chr2	-	176	1	Intergenic	novelGene_15487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAATAATAATGA	NA	False	NA	NA	False	NA	NA	NA	29758456	29758280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29758300_29758500
ES.18683.2	chr2	-	174	2	Intergenic	novelGene_15488	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAATAAATAATAATG	9116	False	NA	NA	False	NA	NA	NA	29861089	29758281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29758408_29861041
ES.18683.3	chr2	-	174	1	Intergenic	novelGene_15489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTTCGAG	NA	False	NA	NA	False	NA	NA	NA	29777053	29776879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29776900_29777100
ES.18683.4	chr2	-	177	1	Intergenic	novelGene_15490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTAGTTATTT	2128	False	NA	NA	False	NA	NA	NA	29786002	29785825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29785800_29786000
ES.18683.5	chr2	-	146	1	Intergenic	novelGene_15492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAGAAGGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	29799865	29799719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29799700_29799900
ES.18684.1	chr2	-	178	1	Intergenic	novelGene_15494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	6669	False	NA	NA	False	NA	NA	NA	29863536	29863358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29863400_29863500
ES.18685.1	chr2	-	173	1	Intergenic	novelGene_15495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAATAATATAGGA	9551	False	NA	NA	False	NA	NA	NA	29880801	29880628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29880600_29880800
ES.18686.1	chr2	-	1640	9	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	27	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.5881699668651	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938846	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29921985_29922084_29922243_29922526_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.10	chr2	-	1780	9	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	-8	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.1982896712397	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTCTACCTGA	NA	False	NA	-15	True	NA	NA	NA	29938881	29921572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923292_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.11	chr2	-	2534	7	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	23	-15	intron_retention	FALSE	canonical	3	156	junction_3	12.953978367882	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTCTACCTGA	NA	False	NA	-15	True	NA	NA	NA	29938850	29921572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.12	chr2	-	1771	9	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	-3944	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	59.6861583618849	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTCTACCTGA	NA	False	NA	-15	True	NA	NA	NA	29929002	29921572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29928832
ES.18686.13	chr2	-	5333	6	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	4	-30	intron_retention	FALSE	canonical	3	156	junction_1	10.8185026690388	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	NA	False	NA	-30	True	NA	NA	NA	29938869	29921587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29928439_29938695
ES.18686.14	chr2	-	1854	1	Intergenic	novelGene_15496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGACAAACCAGAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	29933031	29931177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29931200_29933000
ES.18686.15	chr2	-	847	2	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	26	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTATGGTTTTCTAG	NA	False	NA	NA	False	NA	NA	NA	29938847	29937906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29938602_29938695
ES.18686.2	chr2	-	2380	6	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	42	-14	intron_retention	FALSE	canonical	3	167	junction_3	10.5375518978556	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938831	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29921985_29922084_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.3	chr2	-	1812	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	-12	14	-12	-14	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938905	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.4	chr2	-	1927	8	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	24	-14	intron_retention	FALSE	canonical	3	156	junction_2	12.6813377263841	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938849	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29921985_29922084_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.5	chr2	-	1777	9	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	24	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.5881699668651	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938849	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29921985_29922084_29922264_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.6	chr2	-	4569	4	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	-1719	-14	intron_retention	FALSE	canonical	3	156	junction_2	10.0332779621949	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29926777	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29921985_29922084_29922647_29922761_29923396_29923817
ES.18686.7	chr2	-	2284	7	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	23	-14	intron_retention	FALSE	canonical	3	156	junction_2	12.7366487830285	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938850	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29921985_29922084_29922647_29922761_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.8	chr2	-	2028	7	NIC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	23	-14	intron_retention	FALSE	canonical	3	156	junction_1	13.6798716693136	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	False	NA	-14	True	NA	NA	NA	29938850	29921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18686.9	chr2	-	1722	9	NNC	ENSMUSG00000039715.9	novel	1814	9	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.2862961210921	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTCTACCTGA	NA	False	NA	-15	True	NA	NA	NA	29938898	29921572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29921985_29922084_29922243_29922413_29922565_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ES.18687.1	chr2	-	177	1	Intergenic	novelGene_15500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	29949892	29949715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29949700_29949900
ES.18688.1	chr2	-	288	1	Antisense	novelGene_ENSMUSG00000054766.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAATTAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	29961978	29961690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_29961700_29962000
ES.18689.1	chr2	-	177	1	Intergenic	novelGene_15501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGCACTG	NA	False	NA	NA	False	NA	NA	NA	29975900	29975723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29975700_29975900
ES.1869.1	chr1	+	159	1	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	170914948	170915107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170914900_170915100
ES.18690.1	chr2	-	4064	1	Genic_Genomic	ENSMUSG00000015335.17	novel	NA	NA	NA	NA	-14	1345	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	29983674	29979610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_29979600_29983700
ES.18690.10	chr2	-	1130	5	NNC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	286.467275618001	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTGGACTCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	29983612	29980957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29981594_29981678_29981846_29981999_29982078_29982416_29982554_29983500
ES.18690.11	chr2	-	1264	4	NIC	ENSMUSG00000015335.17	novel	1187	5	NA	NA	-7	-11	intron_retention	FALSE	canonical	3	80	junction_3	284.971343588556	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGCCACCCATG	NA	False	NA	-21	True	TATAAA	-11	NA	29983635	29980973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29981846_29981999_29982078_29982416_29982554_29983458
ES.18690.2	chr2	-	1175	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	-7	-3	-7	3	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGACTCTTTCCTGG	NA	False	NA	0	True	ATTAAA	-19	NA	29983667	29980952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
ES.18690.3	chr2	-	1747	2	NIC	ENSMUSG00000015335.17	novel	1187	5	NA	NA	22	1	intron_retention	FALSE	canonical	3	80	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGTGGACTCTTTCCT	NA	False	NA	-2	True	ATTAAA	-17	NA	29983606	29980954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29982554_29983458
ES.18690.4	chr2	-	1251	4	FSM	ENSMUSG00000015335.17	ENSMUST00000137001.2	846	4	-19	-386	0	-1	multi-exon	FALSE	canonical	3	619	junction_3	30.9443945740671	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983647	29980956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29981846_29981999_29982078_29982416_29982554_29983500
ES.18690.5	chr2	-	1181	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	12	-6	-7	-1	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983635	29980956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ES.18690.6	chr2	-	1175	6	NNC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	324.848026006008	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983588	29980956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983310_29983394_29983500
ES.18690.7	chr2	-	2681	1	NIC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	-9	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983637	29980956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29981000_29983600
ES.18690.8	chr2	-	1184	5	NNC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	308.255068895874	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCGTGGACTCTTTC	NA	False	NA	-4	True	ATTAAA	-15	NA	29983633	29980956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29981579_29981678_29981846_29982119_29982245_29982416_29982554_29983500
ES.18691.1	chr2	-	169	1	Intergenic	novelGene_15502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAACAAAAAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	29984939	29984770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_29984800_29984900
ES.18692.11	chr2	-	4181	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	20.8859335970941	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014594	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997512_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.12	chr2	-	6888	12	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	8	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	33.993193290461	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014583	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29990429_29991047_29991966_29992740_29992857_29993328_29993449_29993550_29994136_29997398_29997681_29997987_29998135_29998232_29998348_30000216_30000487_30000673_30001345_30003257_30003494_30014287
ES.18692.13	chr2	-	4202	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	21.7402851867219	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014594	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991761_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.14	chr2	-	3311	13	NNC	ENSMUSG00000039686.15	novel	4100	16	NA	NA	399	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.9279516520539	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30000386	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29996743_29997008_29997506_29997681_29997987_29998135_29998232_29998348_30000216
ES.18692.15	chr2	-	6643	15	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	11	-4	intron_retention	FALSE	canonical	3	72	junction_8	5.74988908499946	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014580	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.16	chr2	-	10914	9	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-57	-4	intron_retention	FALSE	canonical	3	72	junction_3	7.21001907070987	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014523	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29991966_29992740_29992857_29993328_29997681_29997987_29998135_29998232_29998348_30000216_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.17	chr2	-	3221	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-56	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.782449385437	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014522	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29987964_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.18	chr2	-	8833	11	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-57	-4	intron_retention	FALSE	canonical	3	82	junction_9	4.31740662898458	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014523	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29988856_29990325_29990429_29991047_29991966_29992740_29992857_29993328_29993449_29993550_29998135_29998232_29998348_30000216_30000394_30000673_30001345_30003257_30003494_30014287
ES.18692.19	chr2	-	4575	17	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.511650241896	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014490	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30011743_30011880_30013929
ES.18692.2	chr2	-	4413	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	-224	0	-221	0	multi-exon	FALSE	canonical	3	68	junction_8	7.41889479639656	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGTGGTGTCTTTTCTT	NA	False	NA	-2	True	AATACA	-17	NA	30014818	29987294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.20	chr2	-	4207	16	NNC	ENSMUSG00000039686.15	novel	4100	16	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.0917323115845	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGAGAGTGGTGTCTTT	NA	False	NA	-6	True	AATACA	-13	NA	30014583	29987298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997512_29997681_29997987_29998135_29998232_29998348_30000216_30000433_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.21	chr2	-	4119	16	FSM	ENSMUSG00000039686.15	ENSMUST00000044751.14	4100	16	-24	5	-24	-5	multi-exon	FALSE	canonical	0	0	junction_12	22.6823475171528	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGGAGAGTGGTGTCTT	NA	False	NA	-7	True	AATACA	-12	NA	30014490	29987299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000433_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.22	chr2	-	7959	12	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-22	1203	intron_retention	FALSE	canonical	3	72	junction_5	6.38567611957671	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTAGGAAGTGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	30014488	29988610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.23	chr2	-	2774	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	74	1341	-54	1178	multi-exon	FALSE	canonical	3	68	junction_8	7.41889479639656	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30014520	29988635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.24	chr2	-	2777	9	NIC	ENSMUSG00000039686.15	novel	3934	8	NA	NA	-31	-297	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	28.8679645108553	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGATGGCTCAGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	30014497	29995877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29997008_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.25	chr2	-	2159	8	FSM	ENSMUSG00000039686.15	ENSMUST00000154231.8	3934	8	26	1749	20	120	multi-exon	FALSE	canonical	3	72	junction_1	7.43955232359516	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTGTGTAATGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	30014571	29997068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.26	chr2	-	2191	7	NIC	ENSMUSG00000039686.15	novel	3934	8	NA	NA	-58	116	intron_retention	FALSE	canonical	3	72	junction_1	7.81024967590665	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCATGTTTGTGTAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	30014524	29997072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001345_30003257_30003494_30014287
ES.18692.27	chr2	-	2006	8	FSM	ENSMUSG00000039686.15	ENSMUST00000154231.8	3934	8	63	1865	57	4	multi-exon	FALSE	canonical	3	72	junction_1	7.43955232359516	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGACATGAAAAACACC	NA	False	NA	NA	False	AATAAA	-20	NA	30014534	29997184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.28	chr2	-	2691	5	ISM	ENSMUSG00000039686.15	ENSMUST00000133354.2	3765	7	67	3183	-58	-1237	5prime_fragment	FALSE	canonical	3	82	junction_3	4.06201920231798	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAGAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	30014524	29998763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.3	chr2	-	8050	14	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	72	junction_7	5.96339921332748	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014515	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.4	chr2	-	8988	3	NIC	ENSMUSG00000039686.15	novel	4100	16	NA	NA	-328	-2	intron_retention	FALSE	canonical	3	88	junction_2	1	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	29997982	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29992857_29993328_29993593_29994818
ES.18692.5	chr2	-	3934	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.782449385437	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014594	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988603_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.6	chr2	-	4136	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	21.4140141029187	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014594	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014338
ES.18692.7	chr2	-	5638	15	NIC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	16	-2	intron_retention	FALSE	canonical	3	68	junction_7	7.67749161842723	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014575	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.8	chr2	-	4161	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	22.0907220343745	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014574	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995029_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ES.18692.9	chr2	-	4083	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	22.8245481882994	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGAGTGGTGTCTTTTC	NA	False	NA	-4	True	AATACA	-15	NA	30014534	29987296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003450_30014287
ES.18693.1	chr2	+	985	4	NIC	ENSMUSG00000039678.13	novel	501	5	NA	NA	-18	432	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	6.64997911442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTCTAGCTTC	2679	False	NA	NA	False	AATAAA	-11	NA	30023739	30027957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30023925_30024808_30024883_30027132_30027195_30027293
ES.18693.10	chr2	+	4323	7	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	17	-2003	intron_retention	FALSE	non_canonical	0	0	junction_5	5.99073358520381	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATGGCTTTGAGAAGT	2789	False	NA	NA	False	NA	NA	NA	30023849	30035087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027827_30030088_30030570_30032273
ES.18693.11	chr2	+	509	1	Intergenic	novelGene_15503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	30033216	30033725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30033200_30033700
ES.18693.2	chr2	+	3288	7	ISM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	15	6976	-11	-2041	5prime_fragment	FALSE	canonical	3	10	junction_6	2.80871659105879	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAAAGAAAAAAGA	2712	False	NA	NA	False	NA	NA	NA	30023772	30035049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273
ES.18693.3	chr2	+	993	8	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	-10	1185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	5.03862631101383	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGGAAAAACCAAAACCAAA	2713	False	NA	NA	False	NA	NA	NA	30023773	30033721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30033399
ES.18693.4	chr2	+	3691	13	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6.02540916084174	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCGGTGCTGTGC	2743	False	NA	15	True	AATAAA	-14	NA	30023803	30042020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038631_30038796_30038942_30039001_30039711
ES.18693.5	chr2	+	3536	12	FSM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	52	7	7	-7	multi-exon	FALSE	canonical	1	2	junction_7	5.33195574495097	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCGTGTCGGTGCTGT	2749	False	NA	13	True	AATAAA	-12	NA	30023809	30042018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ES.18693.6	chr2	+	2328	7	ISM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	75	7876	0	1613	5prime_fragment	FALSE	canonical	3	10	junction_6	2.80871659105879	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCCCCTTTGGCTAGAA	2772	False	NA	NA	False	NA	NA	NA	30023832	30034149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273
ES.18693.7	chr2	+	1664	12	NNC	ENSMUSG00000039678.13	novel	3595	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.03433700919131	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCGGTGCTGTGCTGGC	2773	False	NA	19	True	AATAAA	-18	NA	30023833	30042024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30023925_30024808_30024883_30025420_30025565_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30041651
ES.18693.8	chr2	+	914	4	NNC	ENSMUSG00000039678.13	novel	503	6	NA	NA	3	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.11805216802087	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCGGTGCTGTGC	2775	False	NA	15	True	AATAAA	-14	NA	30023835	30042020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30023925_30024808_30024883_30025420_30025445_30041293
ES.18693.9	chr2	+	4023	2	ISM	ENSMUSG00000039678.13	ENSMUST00000129789.2	599	4	-3206	4579	3	432	5prime_fragment	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTCTAGCTTC	2775	False	NA	NA	False	AATAAA	-11	NA	30023835	30027957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30027195_30027293
ES.18694.1	chr2	-	3967	1	Antisense	novelGene_ENSMUSG00000039678.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	30033404	30029437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_30029400_30033400
ES.18695.1	chr2	+	181	1	Intergenic	novelGene_15504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTATCAGGGGCA	NA	False	NA	NA	False	NA	NA	NA	30045949	30046130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30045900_30046100
ES.18696.1	chr2	+	178	1	Intergenic	novelGene_15505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTGTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	30047913	30048091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30047900_30048100
ES.18697.1	chr2	+	1853	2	NIC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	-41	-26	intron_retention	FALSE	canonical	3	384	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGACCATCTCTACT	NA	False	NA	8	True	ATTAAA	-20	NA	30061463	30064055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30062964_30063702
ES.18697.2	chr2	+	1062	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	-24	25	-24	-25	multi-exon	FALSE	canonical	3	314	junction_1	35	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACCATCTCTACTC	NA	False	NA	9	True	ATTAAA	-21	NA	30061480	30064056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30062079_30062853_30062964_30063702
ES.18697.3	chr2	+	522	3	NNC	ENSMUSG00000015337.6	novel	1063	3	NA	NA	17	-26	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	184.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGACCATCTCTACT	NA	False	NA	8	True	ATTAAA	-20	NA	30061521	30064055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30061581_30062853_30062964_30063702
ES.18698.1	chr2	-	2275	12	NNC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	6	15078	intron_retention	FALSE	non_canonical	0	0	junction_1	148.027862018893	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30068448	30048386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30048420_30063466_30064198_30064933_30065082_30065198_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.11	chr2	-	2210	11	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	299	junction_4	40.6674316867933	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCTAGACCCTGATGC	NA	False	NA	-26	True	AATAAA	-17	NA	30068441	30063480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.12	chr2	-	1822	12	NNC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.051097726247	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCTAGACCCTGATGC	NA	False	NA	-26	True	AATAAA	-17	NA	30068460	30063480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065842_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.14	chr2	-	2250	11	NNC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_8	118.444079632542	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTCTAGACCCTGATG	NA	False	NA	-27	True	AATAAA	-16	NA	30068462	30063481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30064198_30064933_30065082_30065198_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067584_30067734_30067931_30067978_30068401
ES.18698.15	chr2	-	2790	9	NIC	ENSMUSG00000039660.17	novel	2010	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	340	junction_1	34.4519593056767	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068457	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604
ES.18698.17	chr2	-	2462	9	NIC	ENSMUSG00000039660.17	novel	2010	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	340	junction_1	36.5545397317488	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068443	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066505_30066626_30066677_30066750_30066841_30067334_30067978_30068401
ES.18698.18	chr2	-	1920	11	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	11	junction_5	114.889338060588	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068458	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067734_30067931_30067978_30068401
ES.18698.19	chr2	-	4241	2	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	1	2	1	0	intron_retention	FALSE	canonical	3	340	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068461	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30064198_30064933
ES.18698.2	chr2	-	2043	13	NNC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	97	15078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.056388457977	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30068344	30048386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30048420_30063466_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068094
ES.18698.20	chr2	-	1786	12	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	110.297194317807	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068434	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.22	chr2	-	2901	8	NIC	ENSMUSG00000039660.17	novel	2010	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	340	junction_1	36.8239052790439	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068458	30063484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066505_30066626_30066677_30066750_30066841_30067334
ES.18698.25	chr2	-	3809	6	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	299	junction_1	53.6223833860451	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGCTCTCTAGACCCT	NA	False	NA	-31	True	AATAAA	-12	NA	30068482	30063485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30066004_30066373_30066505_30066626_30066677_30066750_30067734_30067931_30067978_30068401
ES.18698.26	chr2	-	2959	8	NIC	ENSMUSG00000039660.17	novel	2123	10	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	340	junction_1	39.0666620231708	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGCTCTCTAGACCCT	NA	False	NA	-31	True	AATAAA	-12	NA	30068447	30063485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066505_30066626_30066677_30066750_30067978_30068401
ES.18698.27	chr2	-	1718	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	14	73	6	-71	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTAACCTCTGCTTTT	NA	False	NA	-101	True	NA	NA	NA	30068448	30063555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.3	chr2	-	1852	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	-19	-28	-10	10	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACGTGACTGTAACC	NA	False	NA	0	True	AATAAA	-43	NA	30068481	30063454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ES.18698.4	chr2	-	2756	9	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-14	6	intron_retention	FALSE	canonical	3	340	junction_1	36.2092443306954	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGCTCACGTGACTGT	NA	False	NA	-4	True	AATAAA	-39	NA	30068485	30063458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065825_30065930_30066505_30066626_30066677_30066750_30066841_30067334_30067734_30067931_30067978_30068401
ES.18698.5	chr2	-	2026	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	8	-24	-1	4	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTATGCTCACGTGACT	NA	False	NA	-6	True	AATAAA	-37	NA	30068463	30063460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
ES.18698.6	chr2	-	2546	9	NIC	ENSMUSG00000039660.17	novel	2123	10	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	11	junction_4	127.861986141308	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCTCACCTATGCTCA	NA	False	NA	-13	True	AATAAA	-30	NA	30068445	30063467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067978_30068401
ES.18698.7	chr2	-	3645	7	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	340	junction_1	35.4808242419605	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGATGCTCACCTATGC	NA	False	NA	-16	True	AATAAA	-27	NA	30068472	30063470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30066505_30066626_30066677_30066750_30067495_30067604_30067734_30067931
ES.18698.8	chr2	-	2427	10	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	11	junction_5	120.448954405109	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGATGCTCACCTATG	NA	False	NA	-17	True	AATAAA	-26	NA	30068458	30063471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30067734_30067931_30067978_30068401
ES.18698.9	chr2	-	2418	10	NIC	ENSMUSG00000039660.17	novel	1805	12	NA	NA	1	7	intron_retention	FALSE	canonical	3	299	junction_5	42.6817103108782	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGATGCTCACCTAT	NA	False	NA	-18	True	AATAAA	-25	NA	30068461	30063472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30067734_30067931_30067978_30068401
ES.18699.1	chr2	-	176	1	Intergenic	novelGene_15506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACCAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	30069076	30068900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30068900_30069100
ES.187.1	chr1	+	209	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAATTAGTC	NA	False	NA	NA	False	NA	NA	NA	23895689	23895898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_23895700_23895900
ES.1870.1	chr1	+	1328	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAACCCACTGCTCCCA	NA	False	NA	NA	False	AAAAAG	-37	NA	170969711	170971039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170969700_170971000
ES.18700.1	chr2	+	176	2	Intergenic	novelGene_15507	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30091511	30280052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30091561_30279925
ES.18700.10	chr2	+	4219	3	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	2845	0	2845	0	3prime_fragment	FALSE	canonical	3	48	junction_2	27.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30130578	30153802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30130690_30145179_30147345_30151859
ES.18700.102	chr2	+	5609	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_34	202.641963271502	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4873	False	NA	14	True	ATTAAA	-15	NA	30176433	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229582_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.103	chr2	+	5717	42	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_31	259.973274606863	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4873	False	NA	14	True	ATTAAA	-15	NA	30176433	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226945_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233603_30233713
ES.18700.105	chr2	+	5249	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	201.396057789181	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	4873	False	NA	12	True	ATTAAA	-13	NA	30176433	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233542_30234082
ES.18700.106	chr2	+	5561	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	204.950175322007	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4873	False	NA	14	True	ATTAAA	-15	NA	30176433	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227298_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.107	chr2	+	5688	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	204.818647111133	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4873	False	NA	14	True	ATTAAA	-15	NA	30176433	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194421_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.108	chr2	+	5642	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	262.045366171308	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4873	False	NA	13	True	ATTAAA	-14	NA	30176433	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191038_30191082_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.109	chr2	+	5541	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_23	206.713506870989	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4873	False	NA	14	True	ATTAAA	-15	NA	30176433	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.11	chr2	+	4332	3	NNC	ENSMUSG00000007476.19	novel	4194	3	NA	NA	5385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30133118	30153802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30133343_30145179_30147345_30151859
ES.18700.110	chr2	+	4561	40	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	25	1699	-2	-1578	5prime_fragment	FALSE	canonical	3	896	junction_14	104.013679371436	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCAGCGGCCAT	4873	False	NA	NA	False	NA	NA	NA	30176433	30232579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544
ES.18700.112	chr2	+	3889	27	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	5185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	244.46026770256	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTCTGTGGTTTGT	4874	False	NA	NA	False	AATAAA	-18	NA	30176434	30221883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220777_30220858
ES.18700.113	chr2	+	5674	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	204.088157920427	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4874	False	NA	14	True	ATTAAA	-15	NA	30176434	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186665_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.115	chr2	+	5709	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	266.271983250884	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4874	False	NA	15	True	ATTAAA	-16	NA	30176434	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212428_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232974_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.118	chr2	+	5799	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	201.837285669485	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4875	False	NA	13	True	ATTAAA	-14	NA	30176435	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206741_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.119	chr2	+	5672	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	204.8626734695	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4875	False	NA	14	True	ATTAAA	-15	NA	30176435	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213538_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.12	chr2	+	7947	1	Intergenic	novelGene_15512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGATGGAAATGG	NA	False	NA	NA	False	NA	NA	NA	30133434	30141381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30133400_30141400
ES.18700.120	chr2	+	5672	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	204.482446310454	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4876	False	NA	14	True	ATTAAA	-15	NA	30176436	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215245_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.122	chr2	+	3506	27	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	248.650443191659	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTGTGTCATGTGGC	4876	False	NA	11	True	ATTAAA	-12	NA	30176436	30234271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197671_30220903_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.123	chr2	+	5737	41	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_25	263.444414203452	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4876	False	NA	15	True	ATTAAA	-16	NA	30176436	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221044_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.125	chr2	+	6820	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	896	junction_14	108.394888320709	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4877	False	NA	14	True	ATTAAA	-15	NA	30176437	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.127	chr2	+	2928	25	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	4616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	252.224929240857	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTAGGGTTTTTGT	4878	False	NA	NA	False	NA	NA	NA	30176438	30221314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30199907_30206546_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858
ES.18700.128	chr2	+	5932	42	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-6	intron_retention	FALSE	canonical	3	16	junction_33	207.522876329047	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	4878	False	NA	12	True	ATTAAA	-13	NA	30176438	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229507_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.13	chr2	+	1277	12	FSM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	40	8	26	0	multi-exon	FALSE	canonical	2	23	junction_1	18.5338644710542	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	9957	False	NA	NA	False	AATAAA	-9	NA	30156772	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30156803_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ES.18700.130	chr2	+	5789	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	343.835767662364	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4879	False	NA	15	True	ATTAAA	-16	NA	30176439	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671_30193764_30193849_30193926_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221044_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.131	chr2	+	5660	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	204.914983228512	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4879	False	NA	13	True	ATTAAA	-14	NA	30176439	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197731_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.132	chr2	+	5668	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	204.725546735645	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4879	False	NA	13	True	ATTAAA	-14	NA	30176439	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215546_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.135	chr2	+	5806	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_32	268.171303596344	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4880	False	NA	14	True	ATTAAA	-15	NA	30176440	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226945_30227090_30227235_30227418_30229507_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.136	chr2	+	5656	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	204.653432862674	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGAGCCTGTGTCATGT	4880	False	NA	8	True	ATTAAA	-9	NA	30176440	30234268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229700_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.138	chr2	+	5634	43	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	10249	4	10217	-4	3prime_fragment	FALSE	canonical	3	896	junction_13	105.495612529804	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	1829	False	NA	14	True	ATTAAA	-15	NA	30186657	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.14	chr2	+	1310	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	79	8	-19	0	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	9996	False	NA	NA	False	AATAAA	-9	NA	30156811	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ES.18700.140	chr2	+	5854	41	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	10217	-8	intron_retention	FALSE	non_canonical	0	0	junction_25	205.824992408599	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCCTGTGTCATGTGG	1829	False	NA	10	True	ATTAAA	-11	NA	30186657	30234270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220777_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286
ES.18700.141	chr2	+	5514	42	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	10217	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	208.587821405154	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	1829	False	NA	14	True	ATTAAA	-15	NA	30186657	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.145	chr2	+	5791	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	10217	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	264.85202410252	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	1829	False	NA	14	True	ATTAAA	-15	NA	30186657	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30191963_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215131_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.146	chr2	+	7295	38	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	10217	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	214.430088760109	1417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	1829	False	NA	14	True	ATTAAA	-15	NA	30186657	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30206529_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.147	chr2	+	5642	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	10217	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	206.337773187536	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	1829	False	NA	15	True	ATTAAA	-16	NA	30186657	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227228_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.15	chr2	+	1422	10	NNC	ENSMUSG00000079484.13	novel	1678	12	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_8	25.26794680623	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	10004	False	NA	NA	False	AATAAA	-9	NA	30156819	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30156954_30159700_30159860_30164481_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170290_30171021_30171149_30171781
ES.18700.150	chr2	+	5504	41	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	14401	5	14369	-5	3prime_fragment	FALSE	canonical	3	896	junction_11	104.874374253199	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	5981	False	NA	13	True	ATTAAA	-14	NA	30190809	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.152	chr2	+	5292	38	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	17658	6	17626	-6	3prime_fragment	FALSE	canonical	3	896	junction_8	99.5037724433611	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	9238	False	NA	12	True	ATTAAA	-13	NA	30194066	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.153	chr2	+	5078	36	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	21123	6	21091	-6	3prime_fragment	FALSE	canonical	3	896	junction_6	101.657712999284	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	NA	False	NA	12	True	ATTAAA	-13	NA	30197531	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.154	chr2	+	4864	33	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	23479	5	23447	-5	intron_retention	FALSE	canonical	3	896	junction_4	96.5200756319637	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	NA	False	NA	13	True	ATTAAA	-14	NA	30199887	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472
ES.18700.155	chr2	+	4462	32	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	28716	6	-27827	-6	3prime_fragment	FALSE	canonical	3	896	junction_2	103.671437288529	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	NA	False	NA	12	True	ATTAAA	-13	NA	30205124	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.158	chr2	+	4130	30	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-21005	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	307.731533628805	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30211946	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30223842_30223878_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.159	chr2	+	3813	25	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	37011	6	-19532	-6	3prime_fragment	FALSE	canonical	3	1027	junction_1	89.8577579659467	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	NA	False	NA	12	True	ATTAAA	-13	NA	30213419	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.16	chr2	+	1299	11	NNC	ENSMUSG00000079484.13	novel	1678	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	23.5957623314018	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	NA	False	NA	NA	False	AATAAA	-9	NA	30156834	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171161_30171781
ES.18700.160	chr2	+	5799	24	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-19423	-4	intron_retention	FALSE	canonical	3	1027	junction_1	91.7310113860383	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30213528	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.161	chr2	+	3697	25	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-19423	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	251.813750479507	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30213528	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226731_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.162	chr2	+	3779	21	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	41078	-531	-15465	531	3prime_fragment	FALSE	canonical	3	1033	junction_1	85.950916225483	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCCTGATTCGCACAC	NA	False	NA	NA	False	AATGAA	-34	NA	30217486	30234809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.163	chr2	+	2995	20	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-12337	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	441.705138483673	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	NA	False	NA	12	True	ATTAAA	-13	NA	30220614	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30223842_30223878_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229913_30230608_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.164	chr2	+	2320	14	NNC	ENSMUSG00000052533.15	novel	985	2	NA	NA	-6471	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	331.809526882785	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	NA	False	NA	13	True	ATTAAA	-14	NA	30226480	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30226567_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.165	chr2	+	2368	13	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	50109	7	-6434	-7	3prime_fragment	FALSE	canonical	3	1066	junction_8	84.1618810520667	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTGTGTCATGTGGC	NA	False	NA	11	True	ATTAAA	-12	NA	30226517	30234271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.166	chr2	+	2361	12	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6220	-4	intron_retention	FALSE	canonical	3	1066	junction_7	81.3623666736889	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30226731	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.168	chr2	+	767	3	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	56876	4	333	-4	3prime_fragment	FALSE	canonical	3	1288	junction_1	49.5	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	NA	False	NA	14	True	ATTAAA	-15	NA	30233284	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30233361_30233472_30233603_30233713
ES.18700.169	chr2	+	7051	1	Antisense	novelGene_ENSMUSG00000026860.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	30234683	30241734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30234700_30241700
ES.18700.17	chr2	+	762	7	NIC	ENSMUSG00000079484.13	novel	751	9	NA	NA	-2	-9	intron_retention	FALSE	canonical	0	0	junction_2	32.968419232148	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTATATATGTTTTATG	NA	False	NA	NA	False	NA	NA	NA	30156872	30169529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30156954_30159700_30159864_30164481_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169406
ES.18700.170	chr2	+	178	1	Intergenic	novelGene_15517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATATTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	30252321	30252499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30252300_30252500
ES.18700.171	chr2	+	3400	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	-21	2	-21	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254223	30275531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.172	chr2	+	3394	16	NNC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.3351723263303	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTCTCTGTGTCTTGC	NA	False	NA	1	True	GATAAA	-11	NA	30254246	30275528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265688_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272953_30273032_30273601_30273719_30273940
ES.18700.174	chr2	+	3384	16	NNC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-1	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	15.5429154994236	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30254255	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273583_30273719_30273940
ES.18700.175	chr2	+	4258	15	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	32	junction_1	8.57410672446109	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30254255	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30273032_30273601_30273719_30273940
ES.18700.176	chr2	+	3294	16	NNC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	14.7939927748469	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254255	30275531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30254318_30257563_30257726_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.177	chr2	+	3249	15	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	15.3609629800175	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30254255	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273940
ES.18700.178	chr2	+	4885	14	NNC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_10	16.3959873861523	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTCTGTGTCTTGCTG	NA	False	NA	3	True	GATAAA	-13	NA	30254256	30275530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30254318_30257563_30257800_30258888_30260420_30261126_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271761_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.179	chr2	+	5345	14	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	32	junction_1	8.80895187500163	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254259	30275531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30273032_30273601_30273719_30273940
ES.18700.18	chr2	+	2302	8	NNC	ENSMUSG00000079484.13	novel	1390	11	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	28.2611726145788	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATTATATATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	30156874	30169527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30168156_30168227
ES.18700.180	chr2	+	3295	16	NNC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.0524422464826	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTGTGTCTTGCTGG	NA	False	NA	4	True	GATAAA	-14	NA	30254266	30275531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30254318_30257563_30257800_30258946_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265688_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.182	chr2	+	4175	7	NIC	ENSMUSG00000026858.19	novel	2196	11	NA	NA	1	-33	intron_retention	FALSE	canonical	3	32	junction_1	7.97913946905722	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	30254266	30269073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30257800_30258888_30260420_30261126_30261682_30265684_30265803_30266657_30266759_30267490
ES.18700.183	chr2	+	5650	14	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	1	-3	intron_retention	FALSE	canonical	3	32	junction_1	8.78473662855843	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTCTCTGTGTCTTGC	NA	False	NA	1	True	GATAAA	-11	NA	30254266	30275528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.184	chr2	+	3541	15	NIC	ENSMUSG00000026858.19	novel	3381	16	NA	NA	8	-3	intron_retention	FALSE	canonical	1	1	junction_12	15.8339598873524	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTCTCTGTGTCTTGC	NA	False	NA	1	True	GATAAA	-11	NA	30254285	30275528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30272090_30272977_30273032_30273601_30273719_30273940
ES.18700.185	chr2	+	3439	15	NIC	ENSMUSG00000026858.19	novel	3586	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	19.3154532614142	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTCTGTGTCTTGCTG	NA	False	NA	3	True	GATAAA	-13	NA	30254308	30275530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254560_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273940
ES.18700.186	chr2	+	3537	16	NIC	ENSMUSG00000026858.19	novel	3586	16	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.6232691283447	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30254326	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30254560_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.187	chr2	+	3305	15	ISM	ENSMUSG00000026858.19	ENSMUST00000100214.10	3586	16	3255	2	-144	-2	3prime_fragment	FALSE	canonical	3	43	junction_6	6.39036264181287	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30257562	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.188	chr2	+	2875	9	NNC	ENSMUSG00000026858.19	novel	2196	11	NA	NA	255	770	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.5741756210067	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	30258681	30269876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268195
ES.18700.189	chr2	+	2628	11	ISM	ENSMUSG00000026858.19	ENSMUST00000100214.10	3586	16	7235	2	249	-2	3prime_fragment	FALSE	canonical	3	43	junction_2	7.1386273190299	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	False	NA	2	True	GATAAA	-12	NA	30261542	30275529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.19	chr2	+	1232	11	NNC	ENSMUSG00000079484.13	novel	1678	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.0268599696257	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	NA	False	NA	NA	False	AATAAA	-9	NA	30156882	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170290_30171018_30171149_30171781
ES.18700.190	chr2	+	3823	5	ISM	ENSMUSG00000026858.19	ENSMUST00000100214.10	3586	16	17408	-1893	-9	1891	3prime_fragment	FALSE	canonical	3	47	junction_3	6.20483682299543	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATCCAGGCCTCCTGTA	4331	False	NA	NA	False	AGTAAA	-19	NA	30271715	30277424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ES.18700.191	chr2	+	177	1	Intergenic	novelGene_15518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30279875	30280052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30279900_30280100
ES.18700.20	chr2	+	609	8	NIC	ENSMUSG00000079484.13	novel	751	9	NA	NA	13	-13	combination_of_known_junctions	FALSE	canonical	2	21	junction_7	22.4844617549134	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAGATTATATATGTTT	NA	False	NA	NA	False	NA	NA	NA	30156887	30169525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169406
ES.18700.21	chr2	+	5734	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	-21	-3	-21	3	multi-exon	TRUE	canonical	3	896	junction_14	107.189702087653	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGCAACTTTCAGA	4827	False	NA	21	True	ATTAAA	-22	NA	30176387	30234281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.24	chr2	+	5704	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	205.033245335499	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4840	False	NA	15	True	ATTAAA	-16	NA	30176400	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231831_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.26	chr2	+	568	7	FSM	ENSMUSG00000052533.15	ENSMUST00000113634.3	534	7	-36	2	-6	-2	multi-exon	FALSE	canonical	3	62	junction_6	456.698539033743	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTACTTGTTTCTTGTGT	4842	False	NA	NA	False	NA	NA	NA	30176402	30193819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671
ES.18700.29	chr2	+	5324	42	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	206.776416970384	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4842	False	NA	13	True	ATTAAA	-14	NA	30176402	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30199907_30206546_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.3	chr2	+	4301	1	Intergenic	novelGene_15509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGTAAAAGAATCACAAACC	NA	False	NA	NA	False	NA	NA	NA	30095895	30100196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30095900_30100200
ES.18700.30	chr2	+	5825	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	896	junction_14	106.608660354518	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4842	False	NA	15	True	ATTAAA	-16	NA	30176402	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233603_30233713
ES.18700.33	chr2	+	5814	43	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	4	3	4	-3	intron_retention	FALSE	canonical	3	896	junction_14	102.517959269531	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4852	False	NA	15	True	ATTAAA	-16	NA	30176412	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472
ES.18700.34	chr2	+	5684	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	203.792227621516	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4852	False	NA	15	True	ATTAAA	-16	NA	30176412	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186696_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.35	chr2	+	5775	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	262.76711222791	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4854	False	NA	13	True	ATTAAA	-14	NA	30176414	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193849_30193926_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.37	chr2	+	5674	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_26	200.935801494747	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCATGTGGCAACTTT	4856	False	NA	17	True	ATTAAA	-18	NA	30176416	30234277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220749_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.38	chr2	+	3261	26	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-9	4617	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	226.366251901647	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTAGGGTTTTTGTG	4859	False	NA	NA	False	NA	NA	NA	30176419	30221315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858
ES.18700.39	chr2	+	5653	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_40	204.685147812419	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4859	False	NA	13	True	ATTAAA	-14	NA	30176419	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232974_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.4	chr2	+	4291	4	NNC	ENSMUSG00000099041.2	novel	4238	13	NA	NA	-2993	-18358	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40.8928138212843	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127585	30153802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30127660_30130580_30130690_30145179_30147345_30151859
ES.18700.40	chr2	+	5685	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	204.101943093649	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	4861	False	NA	12	True	ATTAAA	-13	NA	30176421	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206741_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.41	chr2	+	5913	42	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	13	7	-7	-7	intron_retention	FALSE	canonical	3	896	junction_14	101.603936463203	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTGTGTCATGTGGC	4861	False	NA	11	True	ATTAAA	-12	NA	30176421	30234271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286
ES.18700.42	chr2	+	5777	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	896	junction_14	107.455250929775	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4862	False	NA	14	True	ATTAAA	-15	NA	30176422	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.43	chr2	+	5864	46	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	341.564649629529	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4862	False	NA	14	True	ATTAAA	-15	NA	30176422	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671_30193764_30193849_30193926_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202706_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.48	chr2	+	5809	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.476518940603	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4862	False	NA	15	True	ATTAAA	-16	NA	30176422	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30185942_30186059_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.49	chr2	+	5687	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_2	198.4056652526	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4862	False	NA	15	True	ATTAAA	-16	NA	30176422	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188433_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.5	chr2	+	4447	5	NNC	ENSMUSG00000007476.19	novel	4301	4	NA	NA	-47	0	intron_retention	FALSE	canonical	0	0	junction_1	41.8120795942991	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127679	30153802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30127818_30130020_30130113_30130580_30130690_30145179_30147345_30151859
ES.18700.50	chr2	+	5905	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	14	-209	-6	209	multi-exon	FALSE	canonical	3	896	junction_14	107.189702087653	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGGCTGATGTAGGGC	4862	False	NA	NA	False	AATAAA	-25	NA	30176422	30234487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.52	chr2	+	7569	42	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	993	junction_11	95.6883947381652	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4863	False	NA	13	True	ATTAAA	-14	NA	30176423	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.58	chr2	+	5740	44	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	200.41399283365	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4863	False	NA	14	True	ATTAAA	-15	NA	30176423	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30191963_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.59	chr2	+	5673	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	204.307658333335	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4863	False	NA	14	True	ATTAAA	-15	NA	30176423	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191038_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.6	chr2	+	4335	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	-32	-2	-25	2	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGGTCTCCATGCCA	NA	False	NA	9	True	AATAAA	-17	NA	30127701	30153804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
ES.18700.61	chr2	+	6364	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	204.835868022561	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	4864	False	NA	12	True	ATTAAA	-13	NA	30176424	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30231259_30231526_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.62	chr2	+	5757	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-4	-4	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_20	266.023476397463	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4864	False	NA	14	True	ATTAAA	-15	NA	30176424	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215131_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232974_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.67	chr2	+	5615	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	192.756577248514	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4865	False	NA	14	True	ATTAAA	-15	NA	30176425	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.69	chr2	+	5514	42	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	1	9	junction_21	266.552788494389	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4865	False	NA	13	True	ATTAAA	-14	NA	30176425	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.7	chr2	+	4209	15	NIC	ENSMUSG00000099041.2	novel	4238	13	NA	NA	-2870	-8	intron_retention	FALSE	canonical	1	7	junction_4	23.5689392624951	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	NA	False	NA	NA	False	AATAAA	-9	NA	30127708	30172152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859_30152439_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ES.18700.73	chr2	+	5642	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	201.550645492424	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4867	False	NA	14	True	ATTAAA	-15	NA	30176427	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.75	chr2	+	5534	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	207.4187065847	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4867	False	NA	14	True	ATTAAA	-15	NA	30176427	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.77	chr2	+	5576	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	202.801539342048	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4867	False	NA	15	True	ATTAAA	-16	NA	30176427	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713_30233971_30234082
ES.18700.78	chr2	+	5565	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	202.118800800886	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTCATGTGGCA	4867	False	NA	12	True	ATTAAA	-13	NA	30176427	30234272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.8	chr2	+	4294	4	NNC	ENSMUSG00000007476.19	novel	4301	4	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2	junction_1	41.2876091178294	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGGAGGTCTCCATG	NA	False	NA	6	True	AATAAA	-14	NA	30127731	30153801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30127818_30130588_30130690_30145179_30147345_30151859
ES.18700.80	chr2	+	5650	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	263.035901244353	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4868	False	NA	13	True	ATTAAA	-14	NA	30176428	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194292_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216497_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.83	chr2	+	5866	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_31	207.116845657474	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGCCTGTGTCATGTG	4868	False	NA	9	True	ATTAAA	-10	NA	30176428	30234269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226945_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.85	chr2	+	6786	43	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_31	269.49174573706	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4868	False	NA	14	True	ATTAAA	-15	NA	30176428	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226945_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232974_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.86	chr2	+	5951	42	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-4	intron_retention	FALSE	canonical	2	2	junction_17	205.384229523742	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4868	False	NA	14	True	ATTAAA	-15	NA	30176428	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212428_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232803_30232933_30233066_30233286_30233361_30233472
ES.18700.89	chr2	+	5941	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	258.091904758078	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4868	False	NA	13	True	ATTAAA	-14	NA	30176428	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671_30193928_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.9	chr2	+	3303	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	35	963	35	-958	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30127768	30152839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
ES.18700.90	chr2	+	5755	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	204.49892593481	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4869	False	NA	15	True	ATTAAA	-16	NA	30176429	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212428_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.94	chr2	+	5788	45	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_34	262.085193706799	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTCATGTGGCAACT	4869	False	NA	15	True	ATTAAA	-16	NA	30176429	30234275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30228851_30228954_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.96	chr2	+	5289	42	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	271.710940554724	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTGTCATGTGGCAA	4870	False	NA	13	True	ATTAAA	-14	NA	30176430	30234273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30199907_30206546_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226950_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ES.18700.99	chr2	+	5674	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	205.011835983818	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTCATGTGGCAAC	4871	False	NA	14	True	ATTAAA	-15	NA	30176431	30234274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233057_30233286_30233361_30233472_30233603_30233713
ES.18701.1	chr2	-	4134	12	NNC	ENSMUSG00000039648.15	novel	2057	13	NA	NA	-2188	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.7612976359911	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	3101	False	NA	-3	True	AATAAA	-25	NA	30090559	30075135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076925_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968
ES.18701.10	chr2	-	1895	13	NNC	ENSMUSG00000039648.15	novel	1876	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7064499447973	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095860	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075602_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ES.18701.11	chr2	-	1681	12	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	63.016723478903	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	9491	False	NA	-5	True	AATAAA	-23	NA	30084169	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065
ES.18701.14	chr2	-	1971	14	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	49.6595510039827	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095858	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
ES.18701.15	chr2	-	1941	13	NNC	ENSMUSG00000039648.15	novel	1876	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.702271547537	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095858	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075602_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081888_30082085_30084065_30084125_30095644
ES.18701.19	chr2	-	1984	13	FSM	ENSMUSG00000039648.15	ENSMUST00000148555.8	2038	13	52	2	11	-2	multi-exon	FALSE	canonical	3	17	junction_10	50.7807788439681	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCAGCTTCTCTCTTC	NA	False	NA	-7	True	AATAAA	-21	NA	30095776	30075139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
ES.18701.20	chr2	-	1836	11	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	11	2	intron_retention	FALSE	canonical	1	1	junction_5	47.4700958499138	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGCAGCTTCTCTCTT	NA	False	NA	-8	True	AATAAA	-20	NA	30095848	30075140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ES.18701.21	chr2	-	2163	13	NNC	ENSMUSG00000039648.15	novel	1876	13	NA	NA	-250	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.7946597454784	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTCAAGGCAGCTTC	NA	False	NA	-14	True	AATAAA	-14	NA	30096109	30075146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081888_30082085_30084065_30084125_30095644
ES.18701.22	chr2	-	3076	6	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	-49	-7	intron_retention	FALSE	canonical	3	133	junction_5	14.7566933965574	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAACCCTCAAGGCAGC	9487	False	NA	-17	True	AATAAA	-11	NA	30084173	30075149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30076748_30076844_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065
ES.18701.23	chr2	-	132	1	Intergenic	novelGene_15508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	1482	False	NA	NA	False	NA	NA	NA	30092178	30092046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30092000_30092200
ES.18701.4	chr2	-	4062	2	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	4690	0	intron_retention	FALSE	canonical	3	147	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30079434	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30077830_30078064
ES.18701.5	chr2	-	2793	10	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_7	56.4520992184776	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095828	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
ES.18701.6	chr2	-	2556	10	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_9	22.2660678562196	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095828	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ES.18701.7	chr2	-	1951	13	NNC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	63.1987055950428	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095849	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081888_30082085_30082199_30082298_30095644
ES.18701.8	chr2	-	1925	14	NNC	ENSMUSG00000039648.15	novel	2026	14	NA	NA	-250	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.5509631412733	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30096109	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644_30095890_30096088
ES.18701.9	chr2	-	1974	12	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	91	junction_11	21.2688419140215	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095862	30075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ES.18702.1	chr2	-	173	1	Intergenic	novelGene_15510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	30099716	30099543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30099500_30099700
ES.18703.1	chr2	-	181	1	Intergenic	novelGene_15511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAATAACAAGC	9014	False	NA	NA	False	NA	NA	NA	30122048	30121867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30121900_30122000
ES.18704.1	chr2	-	4967	1	Antisense	novelGene_ENSMUSG00000099041.2_AS_novelGene_ENSMUSG00000079484.13_AS_novelGene_ENSMUSG00000007476.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30157778	30152811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_30152800_30157800
ES.18705.1	chr2	-	234	1	Intergenic	novelGene_15513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAACCCAGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	30161276	30161042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30161000_30161300
ES.18706.1	chr2	-	4945	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	7	-2848	7	2848	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAGAAAAAA	2255	False	NA	NA	False	NA	NA	NA	30176339	30171394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30171400_30176300
ES.18706.2	chr2	-	2145	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	-20	-21	-20	21	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTAAAGGCATACACCAA	2228	False	NA	45	True	NA	NA	NA	30176366	30174221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30174200_30176400
ES.18707.1	chr2	-	177	1	Intergenic	novelGene_15514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	30181370	30181193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30181200_30181400
ES.18708.1	chr2	-	174	1	Intergenic	novelGene_15515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGATTCGTTTA	4986	False	NA	NA	False	NA	NA	NA	30189173	30188999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30189000_30189200
ES.18709.1	chr2	-	5750	1	Antisense	novelGene_ENSMUSG00000052533.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTGGGAGTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	30207681	30201931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_30201900_30207700
ES.1871.1	chr1	+	172	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	170972890	170973062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170972900_170973100
ES.18710.1	chr2	-	4201	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-3	28	intron_retention	FALSE	canonical	0	0	junction_2	153.902566580288	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGATGGAAGACTTCA	NA	False	NA	18	True	AATAAA	-44	NA	30249260	30234792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.10	chr2	-	3374	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_2	110.491606295358	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249344	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235830_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.11	chr2	-	3816	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-9	0	intron_retention	FALSE	canonical	1	13	junction_5	130.61884990543	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249286	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.12	chr2	-	3642	9	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_5	141.008643352101	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249322	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30238630_30240299_30240390_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.13	chr2	-	5177	9	NIC	ENSMUSG00000026860.17	novel	1749	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	34	junction_2	104.296452480418	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249281	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236070_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.14	chr2	-	3641	2	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-1175	0	intron_retention	FALSE	canonical	3	344	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30238843	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30236713_30237092
ES.18710.15	chr2	-	1703	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_9	95.7175532491298	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249245	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.17	chr2	-	1716	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	-22	0	2	0	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249299	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.18	chr2	-	1760	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	132.622170092334	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249277	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240725_30244864_30244994_30245264_30245415_30249154
ES.18710.19	chr2	-	2847	12	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	160.975025012223	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249260	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30237117_30238336_30238441_30238566_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.2	chr2	-	1842	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	-4	-28	-4	28	multi-exon	FALSE	canonical	3	213	junction_5	55.8	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGATGGAAGACTTCA	NA	False	NA	18	True	AATAAA	-44	NA	30249332	30234792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.20	chr2	-	1798	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	104.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249272	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236318_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.21	chr2	-	1735	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.33701143064	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249239	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.22	chr2	-	3450	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	213	junction_5	54.8562656088	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249300	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.23	chr2	-	3643	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	243	junction_4	43.7448211220483	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249300	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.24	chr2	-	5294	8	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	286	junction_4	33.7463527885698	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249281	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.25	chr2	-	1806	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.33701143064	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249266	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236304_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.26	chr2	-	2216	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	213	junction_4	53.8401841759365	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249323	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.27	chr2	-	2680	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_2	146.28209049641	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249370	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236368_30236466_30236622_30236713_30237092_30237117_30238566_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249307
ES.18710.28	chr2	-	3266	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_5	131.942601156715	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249279	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238046_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.29	chr2	-	2045	11	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	6	0	intron_retention	FALSE	canonical	2	5	junction_9	128.068770588305	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249246	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236070_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245247_30245415_30249154
ES.18710.3	chr2	-	4293	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	5	5	intron_retention	FALSE	canonical	1	13	junction_4	110.935721816735	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGTCCATGAGCCACC	NA	False	NA	-5	True	AATAAA	-21	NA	30249323	30234815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.30	chr2	-	2198	11	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_10	148.297538752334	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249268	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238336_30238441_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245348_30249154
ES.18710.31	chr2	-	5315	8	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	45	junction_6	107.782850477907	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249324	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.32	chr2	-	3196	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_2	133.272578750895	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249292	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236368_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.33	chr2	-	4923	9	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	141.220516834488	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249329	30234822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.34	chr2	-	3901	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	5	-1	intron_retention	FALSE	canonical	3	213	junction_4	51.1173588421781	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249339	30234823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.37	chr2	-	4223	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_2	139.043558322963	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249291	30234823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.38	chr2	-	4600	9	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16	junction_4	109.984942151187	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249271	30234823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.39	chr2	-	5135	9	NNC	ENSMUSG00000026860.17	novel	1749	12	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_4	141.220516834488	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249252	30234823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240163_30240269_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.4	chr2	-	4949	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	4	intron_retention	FALSE	canonical	3	236	junction_2	45.3782712319454	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGTCCATGAGCCAC	NA	False	NA	-6	True	AATAAA	-20	NA	30249343	30234816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.40	chr2	-	4269	10	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	0	-1	intron_retention	FALSE	canonical	2	5	junction_8	137.7368218697	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGGATCTCAGTCCAT	NA	False	NA	-13	True	AATAAA	-13	NA	30249328	30234823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245247_30245415_30249154
ES.18710.41	chr2	-	4183	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	16	junction_5	105.325714679937	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATCAGGATCTCAGTCCA	NA	False	NA	-14	True	AATAAA	-12	NA	30249268	30234824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.43	chr2	-	3716	3	ISM	ENSMUSG00000026860.17	ENSMUST00000151354.8	1823	9	9979	48	-1670	-42	intron_retention	FALSE	canonical	3	337	junction_1	21.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTAGTCCTGCTTCT	NA	False	NA	2	True	ATTAAA	-30	NA	30239338	30235194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30235440_30235710_30236466_30236622
ES.18710.44	chr2	-	3798	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-1	-45	intron_retention	FALSE	canonical	3	16	junction_5	129.98983815934	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTGCTAGTCCTGCT	NA	False	NA	-1	True	ATTAAA	-27	NA	30249278	30235197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.45	chr2	-	4925	8	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	12	-47	intron_retention	FALSE	canonical	3	286	junction_4	33.7463527885698	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCTCTGCTAGTCCTG	NA	False	NA	-3	True	ATTAAA	-25	NA	30249289	30235199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.46	chr2	-	3069	10	NIC	ENSMUSG00000026860.17	novel	1749	12	NA	NA	27	-50	intron_retention	FALSE	canonical	3	34	junction_2	99.7853251290545	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCCCTCTGCTAGTC	NA	False	NA	-6	True	ATTAAA	-22	NA	30249225	30235202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236070_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.47	chr2	-	1442	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	-14	382	2	-50	multi-exon	FALSE	canonical	3	213	junction_5	55.8	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCCCTCTGCTAGTC	NA	False	NA	-6	True	ATTAAA	-22	NA	30249342	30235202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.49	chr2	-	4225	9	NIC	ENSMUSG00000026860.17	novel	1694	10	NA	NA	0	-52	intron_retention	FALSE	canonical	3	16	junction_4	109.984942151187	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGCCCCTCTGCTAG	NA	False	NA	-8	True	ATTAAA	-20	NA	30249277	30235204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.5	chr2	-	4582	9	NNC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	4	4	intron_retention	FALSE	canonical	3	16	junction_4	137.567199488105	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGTCCATGAGCCAC	NA	False	NA	-6	True	AATAAA	-20	NA	30249268	30234816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.50	chr2	-	1306	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	6	382	1	-52	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGCCCCTCTGCTAG	NA	False	NA	-8	True	ATTAAA	-20	NA	30249271	30235204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.51	chr2	-	4270	9	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	-52	intron_retention	FALSE	canonical	3	16	junction_4	137.567199488105	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGCCCCTCTGCTAG	NA	False	NA	-8	True	ATTAAA	-20	NA	30249344	30235204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.52	chr2	-	3834	9	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-2	-54	intron_retention	FALSE	non_canonical	0	0	junction_1	159.121366808484	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCAGGCCCCTCTGCT	NA	False	NA	-10	True	ATTAAA	-18	NA	30249279	30235206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235712_30236466_30236622_30236713_30237092_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.53	chr2	-	3454	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	2	-54	intron_retention	FALSE	canonical	3	213	junction_4	51.1173588421781	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCAGGCCCCTCTGCT	NA	False	NA	-10	True	ATTAAA	-18	NA	30249275	30235206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.54	chr2	-	4888	8	NNC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	-4	-54	intron_retention	FALSE	canonical	3	45	junction_6	107.782850477907	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCAGGCCCCTCTGCT	NA	False	NA	-10	True	ATTAAA	-18	NA	30249281	30235206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.55	chr2	-	4937	8	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	-8	-56	intron_retention	FALSE	canonical	2	5	junction_6	121.309185008172	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249285	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245247_30245415_30249154
ES.18710.56	chr2	-	3891	7	NNC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	-3212	-56	intron_retention	FALSE	canonical	0	0	junction_6	157.442493910916	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30240880	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30240816
ES.18710.57	chr2	-	3271	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	3	-56	intron_retention	FALSE	canonical	3	243	junction_4	43.7448211220483	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249314	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.58	chr2	-	2815	10	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	1	-56	intron_retention	FALSE	canonical	3	236	junction_2	49.504457961124	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249271	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.59	chr2	-	3045	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-4	-56	intron_retention	FALSE	canonical	3	213	junction_5	54.8562656088	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249281	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.6	chr2	-	3191	10	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	236	junction_2	49.504457961124	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249259	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.60	chr2	-	3875	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	-56	intron_retention	FALSE	canonical	3	16	junction_5	105.325714679937	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249344	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.61	chr2	-	1362	10	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-5	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	108.638828517839	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249282	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30238556_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.62	chr2	-	4848	8	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	-56	intron_retention	FALSE	canonical	3	45	junction_6	107.966737130149	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249276	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.63	chr2	-	1374	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	-3	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.685113406003	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249260	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240295_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.64	chr2	-	3859	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	4	-56	intron_retention	FALSE	canonical	0	0	junction_2	139.043558322963	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCCCAGGCCCCTCTG	NA	False	NA	-12	True	ATTAAA	-16	NA	30249268	30235208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236304_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.65	chr2	-	4798	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	10	-57	intron_retention	FALSE	canonical	3	34	junction_2	104.296452480418	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCCCCAGGCCCCTCT	NA	False	NA	-13	True	ATTAAA	-15	NA	30249291	30235209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236070_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.66	chr2	-	3802	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	1	-57	intron_retention	FALSE	canonical	0	0	junction_2	139.043558322963	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCCCCAGGCCCCTCT	NA	False	NA	-13	True	ATTAAA	-15	NA	30249256	30235209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.67	chr2	-	4674	9	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	7	-58	intron_retention	FALSE	canonical	0	0	junction_7	116.574010825741	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249265	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30245191_30245272_30245415_30249154
ES.18710.68	chr2	-	4106	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	-58	intron_retention	FALSE	canonical	1	1	junction_5	109.650060658757	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249272	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30237494_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.69	chr2	-	1658	11	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	-58	intron_retention	FALSE	canonical	3	34	junction_2	97.5138964455836	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249272	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236070_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.70	chr2	-	1476	12	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	1	-58	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	141.279220629993	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249256	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30237494_30237645_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.71	chr2	-	4451	9	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-4	-58	intron_retention	FALSE	canonical	3	45	junction_7	102.951976061657	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249261	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.72	chr2	-	3074	10	NNC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	-58	intron_retention	FALSE	non_canonical	0	0	junction_2	111.340762670725	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249301	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235963_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.73	chr2	-	4490	9	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	-1	-58	intron_retention	FALSE	canonical	3	236	junction_2	45.3782712319454	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249278	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.74	chr2	-	1438	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	1	-58	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	104.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249300	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236318_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.75	chr2	-	2403	3	NIC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	-596	-58	intron_retention	FALSE	canonical	3	337	junction_1	3.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30238264	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30235440_30235710_30236713_30237092
ES.18710.76	chr2	-	1356	11	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	2	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.202555005786	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249270	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236348_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
ES.18710.78	chr2	-	3113	7	NNC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	2	-58	intron_retention	FALSE	non_canonical	0	0	junction_4	160.027081041512	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249342	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30238786_30244955_30244994_30245294_30245415_30249154
ES.18710.79	chr2	-	1515	12	NNC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	3	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	148.357285960349	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249269	30235210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30237494_30237645_30238566_30238630_30240295_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18710.9	chr2	-	5600	7	NIC	ENSMUSG00000026860.17	novel	1810	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	286	junction_3	36.4344922048081	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249314	30234820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ES.18711.1	chr2	-	183	1	Intergenic	novelGene_15516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATGAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	30251784	30251601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30251600_30251800
ES.18712.1	chr2	+	2247	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	3	1	3	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282268	30290540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ES.18712.10	chr2	+	2255	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	287	junction_5	28.1706111636459	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAGCATACATTAC	NA	False	NA	6	True	AATAAA	-13	NA	30282437	30290538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287160_30287479_30287570_30289153
ES.18712.11	chr2	+	2572	6	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	314	junction_1	20.8173004974228	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282442	30290540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287570_30289153
ES.18712.14	chr2	+	3272	3	ISM	ENSMUSG00000026856.15	ENSMUST00000123202.8	2294	9	4032	0	850	0	intron_retention	FALSE	canonical	3	287	junction_2	20	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	35	False	NA	7	True	AATAAA	-14	NA	30286459	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30286543_30287030_30287160_30287479
ES.18712.15	chr2	+	1562	1	Antisense	novelGene_ENSMUSG00000026853.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGGAGAACCCAGGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	30297765	30299327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30297800_30299300
ES.18712.16	chr2	+	2539	11	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	-429	22	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	156.919884017291	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGTCTGAGTGACTGT	NA	False	NA	40	True	ATTAAA	-43	NA	30305621	30337840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30305707_30306205_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ES.18712.17	chr2	+	3010	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	-423	-1	-423	0	multi-exon	FALSE	canonical	3	440	junction_4	51.3501655905104	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGAGACATCTTTT	NA	False	NA	18	True	ATTAAA	-21	NA	30305627	30337818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ES.18712.18	chr2	+	4845	8	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	-409	0	intron_retention	FALSE	canonical	0	0	junction_4	188.914082620235	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30305641	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322080_30325575_30325694_30327581_30329777_30333301_30333410_30336388
ES.18712.19	chr2	+	6060	9	NNC	ENSMUSG00000039515.12	novel	3738	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	13	junction_6	172.905863116321	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGTGTGAGACATCTT	NA	False	NA	16	True	ATTAAA	-19	NA	30306058	30337816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30325694_30327581_30327682_30328240_30328372_30329675_30329777_30333301_30333410_30336388
ES.18712.2	chr2	+	4188	5	NIC	ENSMUSG00000026856.15	novel	919	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	314	junction_1	23.2647802482637	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282410	30290540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030
ES.18712.20	chr2	+	2457	11	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.91746285415	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306066	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306093_30306205_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ES.18712.21	chr2	+	2466	9	NIC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	25	junction_7	169.029583209567	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306069	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30333301_30333410_30336388
ES.18712.22	chr2	+	2635	11	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	207.672915903832	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGTGTGAGACATCTT	NA	False	NA	16	True	ATTAAA	-19	NA	30306069	30337816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30331921_30331991_30333301_30333410_30336388
ES.18712.24	chr2	+	2571	10	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	163.062663104604	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306071	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328372_30329675_30329777_30333301_30333410_30336388
ES.18712.25	chr2	+	2405	11	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	158.91746285415	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306119	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388_30337641_30337752
ES.18712.26	chr2	+	4369	8	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	187.405377484757	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306138	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316408_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30329777_30333301_30333410_30336388
ES.18712.27	chr2	+	4258	9	NNC	ENSMUSG00000039515.12	novel	3738	9	NA	NA	-1	-2	intron_retention	TRUE	canonical	0	0	junction_6	176.726306757087	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCCTGTGTGAGACATC	NA	False	NA	14	True	ATTAAA	-17	NA	30306147	30337814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30328626_30328722_30329777_30333301_30333410_30336388
ES.18712.29	chr2	+	5370	5	NNC	ENSMUSG00000039515.12	novel	3738	9	NA	NA	-4284	-1	intron_retention	FALSE	canonical	0	0	junction_2	219.074616284041	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGTGTGAGACATCT	1461	False	NA	15	True	ATTAAA	-18	NA	30323956	30337815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30325694_30327581_30328626_30328722_30329777_30333301_30333410_30336388
ES.18712.3	chr2	+	2406	7	NIC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	306	junction_4	23.4354906546081	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282428	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287570_30289153
ES.18712.30	chr2	+	4710	2	FSM	ENSMUSG00000039515.12	ENSMUST00000137741.2	702	2	-3102	-906	-1736	0	multi-exon	FALSE	canonical	3	444	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	7633	False	NA	17	True	ATTAAA	-20	NA	30330128	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30333410_30336388
ES.18712.31	chr2	+	2687	3	NNC	ENSMUSG00000039515.12	novel	810	3	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	9510	False	NA	17	True	ATTAAA	-20	NA	30332005	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30333156_30333301_30333410_30336388
ES.18712.4	chr2	+	4657	4	ISM	ENSMUSG00000026856.15	ENSMUST00000113612.10	1958	7	1	0	1	0	intron_retention	FALSE	canonical	3	314	junction_1	24.7969532178631	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282428	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164
ES.18712.5	chr2	+	2288	9	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	141.368700124886	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282428	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30282525_30283663_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ES.18712.7	chr2	+	2382	10	Fusion	ENSMUSG00000026856.15_ENSMUSG00000039515.12	novel	1040	5	NA	NA	-5	0	multi-exon	TRUE	canonical	0	0	junction_1	166.544918495111	661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30282434	30337817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_30282525_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ES.18712.8	chr2	+	3984	6	FSM	ENSMUSG00000026856.15	ENSMUST00000156059.8	767	6	-5	-3212	-5	0	multi-exon	FALSE	canonical	3	306	junction_4	25.419677417308	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282434	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030
ES.18712.9	chr2	+	1983	7	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	127.880152225955	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282435	30290539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30287027_30287160_30287479_30287570_30289153
ES.18713.1	chr2	-	3858	5	ISM	ENSMUSG00000026853.16	ENSMUST00000146603.2	3036	8	1485	-1174	94	1169	3prime_fragment	FALSE	canonical	3	47	junction_2	9.93415824315276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCACTTGGTGACTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	30295206	30289313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177
ES.18713.10	chr2	-	3543	14	NNC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	22	560	intron_retention	FALSE	canonical	0	0	junction_2	27.0522177502529	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30305590	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30292806_30293500_30293639_30294535_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30301128_30301336_30302994_30303259_30305323
ES.18713.11	chr2	-	3323	14	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	-210	560	intron_retention	FALSE	canonical	1	2	junction_13	17.7570720972647	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30306035	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305206
ES.18713.12	chr2	-	2679	14	NNC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	2	559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5023244441059	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGATTCAGCTGAGGG	NA	False	NA	-7	True	AATAAA	-17	NA	30305558	30291950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30292757_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.13	chr2	-	3157	13	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	-225	559	intron_retention	FALSE	canonical	0	0	junction_2	18.7311015871109	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGATTCAGCTGAGGG	NA	False	NA	-7	True	AATAAA	-17	NA	30306050	30291950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30292806_30293500_30293639_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.16	chr2	-	3686	15	NNC	ENSMUSG00000026853.16	novel	2160	15	NA	NA	5	549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	22.9373592416301	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGGTGACCTTGATT	NA	False	NA	-17	True	AATAAA	-7	NA	30305607	30291960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30304032_30304835_30305206
ES.18713.17	chr2	-	2399	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	224	1210	11	187	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGCCCATCCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	30305601	30292322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.18	chr2	-	2096	13	ISM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	269	2163	4	-627	5prime_fragment	FALSE	canonical	3	47	junction_1	7.14677471933241	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCAGCTGGACCTGAT	NA	False	NA	NA	False	NA	NA	NA	30305556	30293275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.3	chr2	-	4194	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	269	-630	4	0	multi-exon	TRUE	canonical	3	47	junction_2	7.8897731722819	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCACACTTGGCTTGT	NA	False	NA	NA	False	AGTAAA	-23	NA	30305556	30290482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.5	chr2	-	3210	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	-208	831	-208	566	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGCTGAGGGGCAAGCA	NA	False	NA	0	True	AATAAA	-24	NA	30306033	30291943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.6	chr2	-	2776	14	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	22	560	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.006244807594	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30305590	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30292806_30293500_30293654_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.7	chr2	-	3477	13	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	1	560	intron_retention	FALSE	canonical	3	47	junction_1	7.14677471933241	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30305611	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.8	chr2	-	3720	12	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	22	560	intron_retention	FALSE	canonical	3	47	junction_2	8.45307905171515	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30305590	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ES.18713.9	chr2	-	3909	14	NIC	ENSMUSG00000026853.16	novel	3833	14	NA	NA	45	560	intron_retention	FALSE	canonical	0	0	junction_12	23.6955542231202	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGATTCAGCTGAGGGG	NA	False	NA	-6	True	AATAAA	-18	NA	30305738	30291949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30303871_30304009_30305323
ES.18714.1	chr2	+	174	1	Intergenic	novelGene_15519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30349552	30349726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30349600_30349700
ES.18715.1	chr2	-	176	1	Intergenic	novelGene_15520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	6449	False	NA	NA	False	NA	NA	NA	30352860	30352684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30352700_30352900
ES.18716.1	chr2	-	3339	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	-651	-5	-651	5	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGGTTCCTTTGCTTT	NA	False	NA	0	True	AATAAA	-18	NA	30364882	30361543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30361500_30364900
ES.18716.2	chr2	-	1613	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	-3	1073	-3	-1073	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCAGAGAAAAAGCGCC	NA	False	NA	2	True	AATAAA	-31	NA	30364234	30362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30362600_30364200
ES.18717.1	chr2	-	3260	1	Intergenic	novelGene_15521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTCCAGACAGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	30372291	30369031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30369000_30372300
ES.18718.1	chr2	-	269	1	Intergenic	novelGene_15522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	30440691	30440422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30440400_30440700
ES.18719.1	chr2	-	184	1	Intergenic	novelGene_15523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTTTT	2843	False	NA	NA	False	NA	NA	NA	30592066	30591882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30591900_30592100
ES.1872.1	chr1	+	187	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGGTGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	170974177	170974364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170974200_170974400
ES.18720.1	chr2	+	154	1	Intergenic	novelGene_15524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30623352	30623506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30623400_30623500
ES.18721.1	chr2	-	5822	2	Intergenic	novelGene_15525	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGCCTTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	30646257	30640229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30640781_30640986
ES.18722.1	chr2	+	372	1	Intergenic	novelGene_15526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGAGCCAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	30650364	30650736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30650400_30650700
ES.18723.1	chr2	+	1793	5	NNC	ENSMUSG00000026857.10	novel	715	3	NA	NA	-13105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	255.63193755867	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCCAGGCAGTCT	NA	False	NA	11	True	AATAAA	-17	NA	30684732	30713029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30685208_30686404_30686610_30709640_30709845_30710460_30710714_30712373
ES.18723.10	chr2	+	1385	5	NNC	ENSMUSG00000026857.10	novel	763	5	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.471589278446	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTCTGTGTGTGGATG	NA	False	NA	22	True	AATAAA	-28	NA	30697970	30713040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30698241_30698378_30709640_30709845_30710460_30710714_30712373
ES.18723.11	chr2	+	1035	3	ISM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	133	1879	2	513	5prime_fragment	FALSE	canonical	3	480	junction_2	39	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	30697970	30711166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30698096_30709640_30709845_30710460
ES.18723.12	chr2	+	1211	5	NNC	ENSMUSG00000026857.10	novel	1192	4	NA	NA	13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	273.082405145407	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCCAGGCAGTCTGTGT	NA	False	NA	15	True	AATAAA	-21	NA	30697981	30713033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30709640_30709781_30710144_30710189_30710460_30710714_30712373
ES.18723.13	chr2	+	1264	5	NNC	ENSMUSG00000026857.10	novel	763	5	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.471589278446	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATGCCCCAGGCA	NA	False	NA	7	True	AATAAA	-13	NA	30697983	30713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30698334_30698378_30709640_30709845_30710460_30710714_30712373
ES.18723.14	chr2	+	1312	5	NIC	ENSMUSG00000026857.10	novel	763	5	NA	NA	15	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	223.521811016285	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTCTGTGTGTGGATG	NA	False	NA	22	True	AATAAA	-28	NA	30697983	30713040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30698096_30705370_30705511_30709640_30709781_30710460_30710714_30712373
ES.18723.15	chr2	+	1446	4	NNC	ENSMUSG00000026857.10	novel	1192	4	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	236.220236220354	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGCCCCAGGCAGTC	NA	False	NA	10	True	AATAAA	-16	NA	30697983	30713028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698382_30709640_30709781_30710460_30710714_30712373
ES.18723.16	chr2	+	3496	2	ISM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	32	4	16	-4	intron_retention	FALSE	canonical	3	558	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATGCCCCAGGCA	NA	False	NA	7	True	AATAAA	-13	NA	30697984	30713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30698096_30709640
ES.18723.17	chr2	+	1478	5	FSM	ENSMUSG00000026857.10	ENSMUST00000152374.8	763	5	31	-746	16	98	multi-exon	FALSE	canonical	0	0	junction_2	255.383535099661	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCCAAAAGCCAAGCTGA	NA	False	NA	125	True	TATAAA	-22	NA	30697984	30713143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30698096_30705370_30705511_30709640_30709845_30710460_30710714_30712373
ES.18723.18	chr2	+	1489	4	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	225.252944240223	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCCCAGGCAGTCTGT	NA	False	NA	13	True	AATAAA	-19	NA	30698003	30713031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30698378_30709640_30709845_30710460_30710714_30712373
ES.18723.2	chr2	+	1356	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	103	-72	-12	72	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATATATTTAATCATCT	NA	False	NA	99	True	NA	NA	NA	30697940	30713117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ES.18723.20	chr2	+	2048	3	NIC	ENSMUSG00000026857.10	novel	837	4	NA	NA	-34	93	intron_retention	FALSE	canonical	3	35	junction_1	252.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCATTCCCAAAAGCCAA	NA	False	NA	120	True	TATAAA	-17	NA	30698167	30713138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30698378_30709640_30710714_30712373
ES.18723.21	chr2	+	5514	3	ISM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	7230	-7	-2798	7	3prime_fragment	FALSE	canonical	3	90	junction_1	225	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGCAGTCTGTGTGTG	NA	False	NA	18	True	AATAAA	-24	NA	30705182	30713036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30709781_30710460_30710714_30712373
ES.18723.3	chr2	+	1102	4	NNC	ENSMUSG00000026857.10	novel	1192	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	251.837249031989	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATGCCCCAGGCA	NA	False	NA	7	True	AATAAA	-13	NA	30697952	30713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30709640_30709695_30710460_30710714_30712373
ES.18723.4	chr2	+	1195	4	NNC	ENSMUSG00000026857.10	novel	1192	4	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	234.403261259072	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCAGTCTGTGTGTGG	NA	False	NA	19	True	AATAAA	-25	NA	30697953	30713037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30709640_30709781_30710464_30710714_30712373
ES.18723.5	chr2	+	1422	1	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	1	-6814	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTATATGTATGCAAGT	NA	False	NA	NA	False	NA	NA	NA	30697954	30699376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30698000_30699400
ES.18723.6	chr2	+	1150	4	NNC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	246.72251619988	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATGCCCCAGGCA	NA	False	NA	7	True	AATAAA	-13	NA	30697969	30713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30698096_30709640_30709845_30710460_30710629_30712373
ES.18723.7	chr2	+	1785	3	FSM	ENSMUSG00000026857.10	ENSMUST00000128509.8	445	3	2	-1342	2	878	multi-exon	FALSE	canonical	1	2	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGTCTCTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	30697970	30707532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30698096_30705370_30705511_30706012
ES.18723.8	chr2	+	1856	3	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	540	junction_2	9	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCCCAGGCAGTCTGT	NA	False	NA	13	True	AATAAA	-19	NA	30697970	30713031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30698096_30709640_30710714_30712373
ES.18724.1	chr2	-	1850	6	ISM	ENSMUSG00000044320.15	ENSMUST00000129484.8	969	7	1946	-279	-4	0	3prime_fragment	FALSE	canonical	3	8	junction_1	8.82269800004511	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCAGAGTTTTTCTCTG	NA	False	NA	NA	False	GATAAA	-16	NA	30691723	30685312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30685818_30686120_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925
ES.18724.10	chr2	-	1441	7	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	8.78287475083693	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCACTCTAGGTGCCT	NA	False	NA	NA	False	AATAAA	-44	NA	30691722	30685582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30685818_30686120_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
ES.18724.12	chr2	-	1291	8	NNC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-3877	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	12.1352917609116	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGGTCTCCCAGTAAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	30697550	30685597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30695078_30695166_30697165
ES.18724.13	chr2	-	2149	6	NNC	ENSMUSG00000044320.15	novel	911	7	NA	NA	-4	-9	intron_retention	FALSE	canonical	0	0	junction_3	14.8727939540626	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTAGGTCTCCCAGTAA	NA	False	NA	NA	False	AATAAA	-26	NA	30691723	30685600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30686296_30686412_30686579_30687879_30687993_30688698_30688967_30690719_30690829_30690925
ES.18724.14	chr2	-	1844	5	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-14	5	intron_retention	FALSE	canonical	3	15	junction_4	6.81909084849293	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGATGGATCACTAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	30691733	30685610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
ES.18724.15	chr2	-	3411	1	Antisense	novelGene_ENSMUSG00000085491.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCATACCTGGGT	NA	False	NA	NA	False	NA	NA	NA	30697578	30694167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_30694200_30697600
ES.18724.2	chr2	-	4411	4	NIC	ENSMUSG00000044320.15	novel	954	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_1	6.97614984548545	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTGCCTGATTGGGG	NA	False	NA	NA	False	AGTAAA	-6	NA	30691722	30685574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30685818_30686156_30686579_30687879_30690829_30690925
ES.18724.3	chr2	-	3785	2	ISM	ENSMUSG00000044320.15	ENSMUST00000133380.8	774	5	2995	-618	352	-1	3prime_fragment	FALSE	canonical	3	34	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGGTGCCTGATTGGG	NA	False	NA	NA	False	AGTAAA	-5	NA	30690661	30685575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30686579_30687879
ES.18724.5	chr2	-	1512	8	NNC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	-3884	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.983506020002	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGGTGCCTGATTGGG	NA	False	NA	NA	False	AGTAAA	-5	NA	30697557	30685575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30685818_30686156_30686296_30686402_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30695078_30695348_30697165
ES.18724.6	chr2	-	1146	7	NNC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	265	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.0063113207327	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGGTGCCTGATTGGG	NA	False	NA	NA	False	AGTAAA	-5	NA	30691454	30685575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690831_30690925_30691014_30691151
ES.18724.7	chr2	-	1370	7	NIC	ENSMUSG00000044320.15	novel	796	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	11.3345587572795	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTAGGTGCCTGATTG	NA	False	NA	NA	False	AGTAAA	-3	NA	30691718	30685577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30685818_30686120_30686224_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
ES.18724.8	chr2	-	1084	7	NIC	ENSMUSG00000044320.15	novel	1672	7	NA	NA	334	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	10.9506468606501	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCACTCTAGGTGCCT	NA	False	NA	NA	False	AATAAA	-44	NA	30691385	30685582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690719_30690829_30690925_30691014_30691151
ES.18724.9	chr2	-	1542	6	ISM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	-2	270	-2	2	intron_retention	FALSE	canonical	3	17	junction_1	5.63560112144215	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCACTCTAGGTGCCT	NA	False	NA	NA	False	AATAAA	-44	NA	30691721	30685582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925
ES.18725.1	chr2	-	3496	1	Intergenic	novelGene_15527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	30703078	30699582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30699600_30703100
ES.18726.1	chr2	-	3800	4	ISM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	-33	0	4	0	intron_retention	FALSE	canonical	3	95	junction_3	9.79795897113271	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1728	False	NA	-19	True	ATTAAA	-19	NA	30718299	30713108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934
ES.18726.10	chr2	-	4125	3	NIC	ENSMUSG00000039483.11	novel	2792	5	NA	NA	-8	-9	intron_retention	FALSE	canonical	3	92	junction_2	13.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTAAACTCTGTGTCTT	1716	False	NA	-28	True	ATTAAA	-10	NA	30718311	30713117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30715573_30715666_30717111_30718085
ES.18726.2	chr2	-	2823	5	FSM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	-31	0	6	0	multi-exon	FALSE	canonical	3	92	junction_4	10.6858551365813	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1730	False	NA	-19	True	ATTAAA	-19	NA	30718297	30713108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934_30717111_30718085
ES.18726.3	chr2	-	2117	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2027	3	-15	-3	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1709	False	NA	-22	True	ATTAAA	-16	NA	30718318	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ES.18726.4	chr2	-	3920	3	FSM	ENSMUSG00000039483.11	ENSMUST00000147414.2	780	3	-780	-2360	-9	-3	multi-exon	FALSE	canonical	3	95	junction_2	12	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1741	False	NA	-22	True	ATTAAA	-16	NA	30718286	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30715573_30715666_30715774_30716934
ES.18726.5	chr2	-	2189	5	NIC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	7	-3	intron_retention	FALSE	canonical	3	80	junction_2	9.60468635614927	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1731	False	NA	-22	True	ATTAAA	-16	NA	30718296	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30714517_30714652_30714740_30715463_30715774_30716934_30717111_30718085
ES.18726.6	chr2	-	2906	4	NIC	ENSMUSG00000039483.11	novel	2792	5	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	92	junction_3	6.48074069840786	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1738	False	NA	-22	True	ATTAAA	-16	NA	30718289	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30714517_30714652_30715774_30716934_30717111_30718085
ES.18726.7	chr2	-	5171	1	NIC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	-5	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1745	False	NA	-22	True	ATTAAA	-16	NA	30718282	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30713100_30718300
ES.18726.8	chr2	-	2020	6	NNC	ENSMUSG00000039483.11	novel	4147	6	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.3739494970221	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTGTCTTTGTATG	1770	False	NA	-22	True	ATTAAA	-16	NA	30718257	30713111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30714517_30714652_30714740_30715463_30715573_30715702_30715774_30716934_30717111_30718085
ES.18726.9	chr2	-	3059	5	ISM	ENSMUSG00000039483.11	ENSMUST00000129628.8	784	6	-9	-1369	-9	-4	intron_retention	FALSE	canonical	3	80	junction_2	14.4460202131937	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCTGTGTCTTTGTAT	1741	False	NA	-23	True	ATTAAA	-15	NA	30718286	30713112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934
ES.18727.1	chr2	+	180	1	Intergenic	novelGene_15528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGGTAAGAAGTCACCA	4849	False	NA	NA	False	AATAAA	-14	NA	30724125	30724305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30724100_30724300
ES.18728.1	chr2	-	160	1	Intergenic	novelGene_15529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTC	NA	False	NA	NA	False	NA	NA	NA	30733754	30733594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30733600_30733800
ES.18729.1	chr2	+	1238	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	204	-1	-181	1	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGGCTTCAGAAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	30735274	30771264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
ES.18729.2	chr2	+	2077	3	NIC	ENSMUSG00000039476.14	novel	1441	4	NA	NA	-121	0	intron_retention	FALSE	canonical	2	7	junction_1	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGGCTTCAGAAGGGCA	NA	False	NA	NA	False	AATAAA	-19	NA	30735334	30771263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30735694_30768421_30769683_30770806
ES.18729.3	chr2	+	195	1	Intergenic	novelGene_15530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGGGAAGGACTGATG	NA	False	NA	NA	False	NA	NA	NA	30763364	30763559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30763400_30763600
ES.1873.1	chr1	+	208	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAATTAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	170974495	170974703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_170974500_170974700
ES.18730.1	chr2	+	1730	2	Intergenic	novelGene_15531	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTGTTTTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	30772205	30774602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30773612_30774278
ES.18730.2	chr2	+	174	1	Intergenic	novelGene_15532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAATAGT	NA	False	NA	NA	False	NA	NA	NA	30772900	30773074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30772900_30773100
ES.18731.1	chr2	+	170	1	Intergenic	novelGene_15533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAATAATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	30790420	30790590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30790400_30790600
ES.18732.1	chr2	-	5409	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	38	-1800	38	1800	multi-exon	FALSE	canonical	3	78	junction_1	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTGTCTTTTATTT	8449	False	NA	NA	False	CATAAA	-13	NA	30793271	30777682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30782839_30790878_30790962_30793101
ES.18732.2	chr2	-	3666	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	78	junction_1	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGTCATGATGTC	8392	False	NA	NA	False	NA	NA	NA	30793328	30779482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30782839_30790878_30790962_30793101
ES.18732.3	chr2	-	3390	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	3	254	3	-254	multi-exon	FALSE	canonical	3	78	junction_1	10.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGGAGTGGCATTATTA	8414	False	NA	NA	False	NA	NA	NA	30793306	30779736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30782839_30790878_30790962_30793101
ES.18732.4	chr2	-	2132	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	2	1513	2	1298	multi-exon	FALSE	canonical	3	78	junction_1	10.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTTTTTTCCTGCGT	8413	False	NA	NA	False	NA	NA	NA	30793307	30780995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30782839_30790878_30790962_30793101
ES.18732.5	chr2	-	1322	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	14	2311	14	500	multi-exon	FALSE	canonical	3	78	junction_1	10.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCGGTGTCTAAGACC	8425	False	NA	NA	False	ATTAAA	-20	NA	30793295	30781793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30782839_30790878_30790962_30793101
ES.18732.6	chr2	-	1208	2	NIC	ENSMUSG00000050737.14	novel	3647	3	NA	NA	38	493	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGAATGTTCGGTGTC	8449	False	NA	NA	False	ATTAAA	-13	NA	30793271	30781800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30782839_30793101
ES.18733.1	chr2	+	181	1	Intergenic	novelGene_15534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACCCAAA	NA	False	NA	NA	False	NA	NA	NA	30797134	30797315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30797100_30797300
ES.18734.1	chr2	-	3692	1	Intergenic	novelGene_15535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTGTTTGTTTTCTT	5893	False	NA	NA	False	ATTAAA	-13	NA	30801661	30797969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30798000_30801700
ES.18735.1	chr2	-	189	1	Intergenic	novelGene_15536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	7234	False	NA	NA	False	NA	NA	NA	30821035	30820846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30820800_30821000
ES.18736.1	chr2	-	175	1	Intergenic	novelGene_15537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGAAACTAAAAT	NA	False	NA	NA	False	NA	NA	NA	30831647	30831472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30831500_30831600
ES.18737.1	chr2	+	3043	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	1	-5	1	5	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTTTTCCTTGTCTGT	NA	False	NA	18	True	AATAAA	-23	NA	30842971	30849032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
ES.18737.10	chr2	+	1214	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	50	1775	18	128	multi-exon	FALSE	canonical	1	21	junction_2	34.4990941910074	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	30843020	30847252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
ES.18737.11	chr2	+	5240	3	NIC	ENSMUSG00000026848.15	novel	4775	4	NA	NA	19	1	intron_retention	FALSE	canonical	3	101	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843021	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30843236_30843763_30846588_30846823
ES.18737.13	chr2	+	4745	4	FSM	ENSMUSG00000026848.15	ENSMUST00000133544.8	4775	4	32	-2	20	1	multi-exon	FALSE	canonical	3	100	junction_2	0.471404520791032	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843022	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30843236_30843763_30845966_30846459_30846588_30846823
ES.18737.14	chr2	+	4497	5	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43.5918570377542	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843022	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30843236_30843763_30845542_30845789_30845966_30846459_30846588_30846823
ES.18737.15	chr2	+	3165	4	NNC	ENSMUSG00000026848.15	novel	4775	4	NA	NA	20	1	intron_retention	FALSE	non_canonical	0	0	junction_1	47.377913278939	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843022	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30843154_30845261_30845966_30846459_30846588_30846823
ES.18737.16	chr2	+	4698	5	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_2	43.5918570377542	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30843022	30849027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30843236_30843763_30845478_30845526_30845966_30846459_30846588_30846823
ES.18737.17	chr2	+	4448	5	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.5918570377542	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30843022	30849024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30843236_30843763_30845494_30845789_30845966_30846459_30846588_30846823
ES.18737.18	chr2	+	5270	3	NIC	ENSMUSG00000026848.15	novel	4775	4	NA	NA	23	1	intron_retention	FALSE	canonical	3	100	junction_1	0.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843025	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30845966_30846459_30846588_30846823
ES.18737.19	chr2	+	5951	2	NNC	ENSMUSG00000026848.15	novel	2809	5	NA	NA	23	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30843025	30849024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30845476_30845523
ES.18737.2	chr2	+	3028	5	NNC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.5918570377542	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842980	30849027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30843236_30843763_30844023_30845783_30845966_30846459_30846588_30846823
ES.18737.21	chr2	+	4332	2	NNC	ENSMUSG00000026848.15	novel	4775	4	NA	NA	-621	0	intron_retention	FALSE	canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30844643	30849024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30845478_30845526
ES.18737.3	chr2	+	3039	5	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5918570377542	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842980	30849027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30843236_30843763_30844030_30845779_30845966_30846459_30846588_30846823
ES.18737.6	chr2	+	3550	4	FSM	ENSMUSG00000026848.15	ENSMUST00000155213.8	1324	4	-196	-2030	-3	0	multi-exon	FALSE	canonical	1	21	junction_1	37.4788829431544	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30842987	30849027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30844030_30845789_30845966_30846459_30846588_30846823
ES.18737.7	chr2	+	3511	4	NIC	ENSMUSG00000026848.15	novel	3039	5	NA	NA	0	1	intron_retention	FALSE	canonical	1	21	junction_2	37.7123616632825	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30842990	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30843236_30843763_30844030_30845789_30846588_30846823
ES.18737.8	chr2	+	5226	4	NNC	ENSMUSG00000026848.15	novel	4775	4	NA	NA	10	1	intron_retention	FALSE	canonical	0	0	junction_1	47.6118565998942	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCCTGAGCTTTTCCT	NA	False	NA	11	True	AATAAA	-16	NA	30843012	30849025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30845478_30845526_30845966_30846467_30846588_30846823
ES.18737.9	chr2	+	5480	2	ISM	ENSMUSG00000026848.15	ENSMUST00000133544.8	4775	4	29	-4	17	0	intron_retention	FALSE	canonical	3	101	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	False	NA	13	True	AATAAA	-18	NA	30843019	30849027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30843236_30843763
ES.18738.1	chr2	-	4879	2	Antisense	novelGene_ENSMUSG00000026848.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGCTGACAACAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	30849964	30845037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_30845482_30845529
ES.18738.10	chr2	-	1455	4	NIC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-20	-12	intron_retention	FALSE	canonical	0	0	junction_2	231.548890925629	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTTCAGCGGTGGC	NA	False	NA	-20	True	TTTAAA	-18	NA	30857920	30850650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30851210_30853486_30853882_30857101_30857368_30857685
ES.18738.11	chr2	-	4013	2	NIC	ENSMUSG00000026849.19	novel	1605	4	NA	NA	-1	-14	intron_retention	FALSE	canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAAGCTTTCAGCGGTG	NA	False	NA	-22	True	TTTAAA	-16	NA	30857885	30850652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30853882_30857101
ES.18738.12	chr2	-	4662	3	NIC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-10	-15	intron_retention	FALSE	canonical	3	466	junction_1	23.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGAAGCTTTCAGCGGT	NA	False	NA	-23	True	TTTAAA	-15	NA	30857910	30850653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30851210_30853486_30857368_30857685
ES.18738.13	chr2	-	4569	4	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-21	-20	intron_retention	FALSE	canonical	3	20	junction_2	222.15460082264	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTATAAGAAGCTTTCA	NA	False	NA	-28	True	TTTAAA	-10	NA	30857921	30850658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30851210_30853486_30853607_30853705_30857368_30857685
ES.18738.2	chr2	-	6887	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	34	-5520	-11	5520	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCATGGTGGCGACGG	NA	False	NA	NA	False	AATAAA	-19	NA	30857911	30845118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ES.18738.3	chr2	-	1911	1	Genic_Genomic	ENSMUSG00000026849.19	novel	NA	NA	NA	NA	1688	377	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAAACCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	30852172	30850261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_30850300_30852200
ES.18738.4	chr2	-	1406	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	-1	-4	-1	4	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGTGTGTCTTTTGA	NA	False	NA	-4	True	TTTAAA	-34	NA	30857946	30850634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ES.18738.5	chr2	-	4586	4	NIC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	466	junction_1	30.5759527879163	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTGGCTTTGTGTGTCT	NA	False	NA	-9	True	TTTAAA	-29	NA	30857911	30850639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30851210_30853486_30853615_30853705_30857368_30857685
ES.18738.6	chr2	-	1353	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	220.841996685413	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGTGGCTTTGTGTGTCT	NA	False	NA	-9	True	TTTAAA	-29	NA	30857898	30850639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30851210_30853486_30853615_30853705_30853889_30857108_30857368_30857685
ES.18738.9	chr2	-	1362	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	19	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	240.429173562611	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTTCAGCGGTGGC	NA	False	NA	-20	True	TTTAAA	-18	NA	30857926	30850650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30851210_30853486_30853607_30853705_30853882_30857101_30857368_30857685
ES.18739.1	chr2	-	230	1	Intergenic	novelGene_15538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTGAGATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	30859033	30858803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30858800_30859000
ES.1874.1	chr1	-	1192	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	-16	1995	-16	247	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTTGGAATCTAGTG	440	False	NA	-2	True	ATTAAA	-20	NA	170978188	170956728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ES.1874.2	chr1	-	1250	6	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	242	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	366.673369635702	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGACTCTTTGGAATC	456	False	NA	-7	True	ATTAAA	-15	NA	170978172	170956733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978048
ES.1874.3	chr1	-	1171	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	2	242	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	446.350198834951	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGACTCTTTGGAATC	473	False	NA	-7	True	ATTAAA	-15	NA	170978155	170956733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170957475_170963561_170963726_170971126_170971229_170973324_170973382_170978048
ES.1874.4	chr1	-	1007	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	242	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	373.85324660888	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGACTCTTTGGAATC	456	False	NA	-7	True	ATTAAA	-15	NA	170978172	170956733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ES.1874.5	chr1	-	2548	1	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	18875	241	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGACTCTTTGGAAT	8932	False	NA	-8	True	ATTAAA	-14	NA	170959282	170956734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170956700_170959300
ES.1874.6	chr1	-	1107	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	240	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	369.136153742762	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCTTGACTCTTTGGAA	456	False	NA	-9	True	ATTAAA	-13	NA	170978172	170956735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_170957475_170963561_170963726_170971126_170971229_170973324_170973382_170978127
ES.18740.1	chr2	+	1105	1	Antisense	novelGene_ENSMUSG00000026851.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30868673	30869778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30868700_30869800
ES.18741.1	chr2	+	4482	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	-339	945	-339	-941	multi-exon	TRUE	canonical	1	7	junction_21	9.09889721645187	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30871951	30912653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.10	chr2	+	1039	4	ISM	ENSMUSG00000026854.17	ENSMUST00000061544.11	1360	10	-19	6748	10	766	5prime_fragment	FALSE	canonical	3	19	junction_1	5.35412613473634	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAGAGAGAGTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	30872355	30890856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068
ES.18741.11	chr2	+	4329	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-13	-942	intron_retention	FALSE	canonical	1	7	junction_20	9.13540237534978	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	NA	False	NA	19	True	AATAAA	-19	NA	30872361	30912652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.12	chr2	+	5118	21	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-7	332	intron_retention	FALSE	canonical	1	7	junction_18	9.61197170199746	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872367	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30909900_30910840_30910913_30911335
ES.18741.13	chr2	+	5023	23	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	6	-944	intron_retention	FALSE	canonical	0	0	junction_2	12.3600429269896	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTAGCTTGTACTGTGA	NA	False	NA	17	True	AATAAA	-17	NA	30872380	30912650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30873031_30873169_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.14	chr2	+	5426	24	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	6	-942	intron_retention	FALSE	non_canonical	0	0	junction_8	11.035430138263	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	NA	False	NA	19	True	AATAAA	-19	NA	30872380	30912652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895378_30895643_30896510_30897790_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.15	chr2	+	4577	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	6	-938	intron_retention	FALSE	canonical	0	0	junction_2	11.7136599689284	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTGTGACACTGT	NA	False	NA	23	True	AATAAA	-23	NA	30872380	30912656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30873031_30873169_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.16	chr2	+	4261	24	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	6	-945	intron_retention	FALSE	canonical	0	0	junction_11	10.9061991355431	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTAGCTTGTACTGTG	NA	False	NA	16	True	AATAAA	-16	NA	30872380	30912649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30901036_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.17	chr2	+	5666	22	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	7	-941	intron_retention	FALSE	canonical	1	7	junction_18	9.50975152933345	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30872381	30912653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.18	chr2	+	3645	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	7	332	intron_retention	FALSE	canonical	0	0	junction_2	11.7136599689284	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872381	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30873031_30873169_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.2	chr2	+	4062	26	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-53	-941	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.6833702547464	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30872237	30912653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900368_30900501_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.20	chr2	+	2742	24	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	7	332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.0899276923729	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872381	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900368_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906354_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.21	chr2	+	4131	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	7	-943	intron_retention	FALSE	canonical	1	7	junction_20	9.29194622510718	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCTTGTACTGTGAC	NA	False	NA	18	True	AATAAA	-18	NA	30872381	30912651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.23	chr2	+	5643	19	NIC	ENSMUSG00000026854.17	novel	4970	24	NA	NA	36	332	intron_retention	FALSE	canonical	3	14	junction_11	7.86557588168961	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30886095	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30907524_30907693_30907864_30907944_30909900_30910840_30910913_30911335
ES.18741.25	chr2	+	4058	24	NNC	ENSMUSG00000026854.17	novel	430	6	NA	NA	184	-939	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.5407661236074	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTACTGTGACACTG	NA	False	NA	22	True	AATAAA	-22	NA	30886243	30912655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30886377_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.26	chr2	+	3339	19	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	3219	-941	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7598449603669	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCTTGTACTGTGACAC	NA	False	NA	20	True	AATAAA	-20	NA	30895791	30912653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30895854_30896395_30896510_30897790_30897870_30900177_30900368_30900501_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.27	chr2	+	3594	17	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	4068	-943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.8207290646827	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCTTGTACTGTGAC	NA	False	NA	18	True	AATAAA	-18	NA	30896640	30912651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30896940_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.28	chr2	+	3764	13	NIC	ENSMUSG00000026854.17	novel	4970	24	NA	NA	7903	-945	intron_retention	FALSE	canonical	1	7	junction_9	10.5708587898787	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTAGCTTGTACTGTG	NA	False	NA	16	True	AATAAA	-16	NA	30900475	30912649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.29	chr2	+	2334	11	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	16264	945	-7513	-945	3prime_fragment	FALSE	canonical	1	7	junction_7	9.7923439482077	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTAGCTTGTACTGTG	687	False	NA	16	True	AATAAA	-16	NA	30902317	30912649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.3	chr2	+	3262	24	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-27	332	intron_retention	FALSE	canonical	1	7	junction_20	9.25464171076909	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872318	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.30	chr2	+	2648	6	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	21786	1	-1991	-1	3prime_fragment	FALSE	canonical	1	7	junction_2	12.0664825031987	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGCTCTGGTGAACCT	6209	False	NA	NA	False	AATAAA	-12	NA	30907839	30913593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.31	chr2	+	1626	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-557	-938	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTGTGACACTGT	7643	False	NA	23	True	AATAAA	-23	NA	30909273	30912656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
ES.18741.4	chr2	+	3322	26	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-25	332	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.6858889263932	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGTCATCGCTGTGT	NA	False	NA	NA	False	AATATA	-11	NA	30872320	30911725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30873031_30873169_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.5	chr2	+	4407	26	NNC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	-10	-943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.8280941686597	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCTTGTACTGTGAC	NA	False	NA	18	True	AATAAA	-18	NA	30872335	30912651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30873031_30873169_30886059_30886160_30888784_30888881_30890068_30890297_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.6	chr2	+	3179	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	47	1862	-8	343	multi-exon	FALSE	canonical	1	7	junction_21	9.09889721645187	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGTGTCCCCAAATTTG	NA	False	NA	NA	False	AATATA	-22	NA	30872337	30911736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.8	chr2	+	5626	23	NIC	ENSMUSG00000026854.17	novel	5088	25	NA	NA	0	-942	intron_retention	FALSE	canonical	1	7	junction_19	9.33977542335348	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGCTTGTACTGTGACA	NA	False	NA	19	True	AATAAA	-19	NA	30872345	30912652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30897870_30900177_30900626_30900990_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ES.18741.9	chr2	+	3115	2	NNC	ENSMUSG00000026854.17	novel	1360	10	NA	NA	2	2482	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTGTTGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	30872347	30876728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_30872411_30873676
ES.18742.1	chr2	-	3463	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	46	20	intron_retention	FALSE	canonical	1	1	junction_5	159.665225941656	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTGACCTGTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	30871907	30862168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867744_30867818_30867903_30867982_30868906_30868978_30870010_30871555_30871789
ES.18742.11	chr2	-	1433	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	60	-664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	122.962392624737	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGTTGCCTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	30871893	30862852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870236_30871494_30871555_30871789
ES.18742.12	chr2	-	1012	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	50	922	50	-922	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTTCCCCATCAGATA	NA	False	NA	NA	False	CATAAA	-16	NA	30871903	30863110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ES.18742.13	chr2	-	162	1	Intergenic	novelGene_15539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAAAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	30864564	30864402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30864400_30864600
ES.18742.2	chr2	-	1836	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	39	109	39	-109	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30871914	30862297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ES.18742.3	chr2	-	1107	10	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	30	-452	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	115.283011929365	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGTGTGTGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	30871923	30862640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30862820_30863214_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ES.18742.4	chr2	-	1602	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	-274	656	-14	-656	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTCTTCTAATGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	30872227	30862844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ES.18742.5	chr2	-	3042	8	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	-19	-657	intron_retention	FALSE	canonical	0	0	junction_2	130.689380921765	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTCTTCTAATGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	30872232	30862845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30863314_30863703_30863803_30863908_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30871555_30871789
ES.18742.6	chr2	-	1540	8	NIC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	-8	-660	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	127.517745863876	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCCTGTCTTCTAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	30872221	30862848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30871494_30871555_30871789
ES.18742.7	chr2	-	1257	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	39	-664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.911645526522	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGTTGCCTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	30871914	30862852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30863300_30863703_30863789_30863908_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ES.18742.8	chr2	-	1232	8	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	6	-664	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	122.978345530373	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGTTGCCTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-9	NA	30871947	30862852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868953_30871499_30871555_30871789
ES.18743.1	chr2	-	272	1	Intergenic	novelGene_15540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAAAACAAT	NA	False	NA	NA	False	AGTAAA	-4	NA	30905328	30905056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30905100_30905300
ES.18744.1	chr2	+	2045	1	Antisense	novelGene_ENSMUSG00000075415.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCAGTGGCGACACAC	148	False	NA	NA	False	NA	NA	NA	30919667	30921712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30919700_30921700
ES.18744.2	chr2	+	5012	6	Antisense	novelGene_ENSMUSG00000075415.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGCAAGGGCTCTGAAC	148	False	NA	NA	False	NA	NA	NA	30919667	30935870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30923198_30926126_30926267_30926553_30926675_30927166_30927301_30930416_30930530_30934896
ES.18744.3	chr2	+	7072	1	Antisense	novelGene_ENSMUSG00000075415.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGCAAGGGCTCTGAAC	1139	False	NA	NA	False	NA	NA	NA	30928798	30935870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_30928800_30935900
ES.18745.1	chr2	+	141	1	Intergenic	novelGene_15544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	30950481	30950622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30950500_30950600
ES.18746.1	chr2	+	179	1	Intergenic	novelGene_15545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAGAAAAA	703	False	NA	NA	False	NA	NA	NA	30953688	30953867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30953700_30953900
ES.18747.1	chr2	+	242	1	Intergenic	novelGene_15548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTTTTTAAGG	1155	False	NA	NA	False	NA	NA	NA	30983518	30983760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30983500_30983800
ES.18748.1	chr2	+	205	1	Intergenic	novelGene_15550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCGCTACCATGCCCC	6111	False	NA	NA	False	NA	NA	NA	30988474	30988679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_30988500_30988700
ES.18749.1	chr2	+	4396	2	Antisense	novelGene_ENSMUSG00000087269.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAACAGACAGCA	NA	False	NA	NA	False	AATAAA	-10	NA	31032319	31036975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_31035772_31036031
ES.1875.1	chr1	+	172	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAAGAGTTCTG	7942	False	NA	NA	False	NA	NA	NA	171006521	171006693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171006500_171006700
ES.18750.1	chr2	+	4159	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-169	2144	-169	2065	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGGCTTCATTTT	NA	False	NA	101	True	NA	NA	NA	31042158	31106643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.12	chr2	+	2667	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	4	-1318	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	125.749539742944	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGGGCCACTGAGATG	NA	False	NA	NA	False	AATAAA	-16	NA	31042331	31080807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079438
ES.18750.15	chr2	+	2126	16	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	6	8973	6	-260	5prime_fragment	FALSE	canonical	1	139	junction_14	92.4117356664666	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31042333	31099814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078
ES.18750.16	chr2	+	2303	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	8	25920	8	742	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAACGTAGATCACTTTG	NA	False	NA	NA	False	AAAACA	-28	NA	31042335	31082867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ES.18750.18	chr2	+	4399	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	8	1727	8	-1727	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGTATTGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	31042335	31107060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.19	chr2	+	1542	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	9	26680	-8	-18	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTTGTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	31042336	31082107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ES.18750.2	chr2	+	6153	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-139	120	-139	-120	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGAAGGCTCATTT	NA	False	NA	NA	False	NA	NA	NA	31042188	31108667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.21	chr2	+	2578	19	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-8	43	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	175.664496788904	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGAGCCTGGGTCTGT	NA	False	NA	18	True	AGTAAA	-26	NA	31042336	31104621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31072917_31072999_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31098540_31099163_31100460_31100583_31104255
ES.18750.22	chr2	+	3778	16	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-7	1983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	121.782209976115	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGTGTTCAACTCTGA	NA	False	NA	19	True	AATAAA	-32	NA	31042337	31106561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31099104_31099163_31100460_31100583_31104255
ES.18750.24	chr2	+	3957	19	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-1	1967	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	154.368686455591	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTGGACAACAAGAGC	NA	False	NA	3	True	AATAAA	-16	NA	31042343	31106545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31072917_31072999_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.25	chr2	+	3908	18	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-1	1975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	129.028282085187	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACAAGAGCAAGTGTTC	NA	False	NA	11	True	AATAAA	-24	NA	31042343	31106553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31067013_31067818_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.26	chr2	+	1724	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	18	4392	1	-183	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGCAGTGAGCAAGCG	NA	False	NA	NA	False	AATGAA	-15	NA	31042345	31104395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.27	chr2	+	1560	15	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	3	1334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	124.769910684607	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCATAGGGGCTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	31042347	31083459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31083225
ES.18750.28	chr2	+	3274	17	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	3	31	intron_retention	FALSE	canonical	1	139	junction_14	89.5997174939743	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	NA	False	NA	6	True	AGTAAA	-14	NA	31042347	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31099163_31100460_31100583_31104255
ES.18750.30	chr2	+	3833	17	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	3	1985	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	129.339910700449	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGTTCAACTCTGAAT	NA	False	NA	21	True	AATAAA	-34	NA	31042347	31106563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.33	chr2	+	2332	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	6	-1634	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	125.749539742944	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	31042350	31080491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079438
ES.18750.35	chr2	+	5621	16	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	9	-313	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	134.472896897479	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTTGTGTCTGTGGTCC	NA	False	NA	16	True	AATAAA	-12	NA	31042353	31108474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.36	chr2	+	2035	19	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	9	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	168.990101251486	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGAGCCTGGGTCTGT	NA	False	NA	18	True	AGTAAA	-26	NA	31042353	31104621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075612_31078694_31078826_31081858_31081903_31089536_31089637_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.38	chr2	+	1952	18	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-7	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	129.028282085187	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	NA	False	NA	6	True	AGTAAA	-14	NA	31042355	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31067013_31067818_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.4	chr2	+	6144	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-6	-4	-6	4	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCCCCACCTGGCGAAG	NA	False	NA	19	True	ATTAAA	-34	NA	31042321	31108791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.40	chr2	+	4960	17	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	31	intron_retention	FALSE	canonical	1	139	junction_13	90.5596962989055	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	NA	False	NA	6	True	AGTAAA	-14	NA	31042356	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.41	chr2	+	2620	20	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	201.150692536798	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTACCTTGCTAATTGG	NA	False	NA	4	True	AGTAAA	-12	NA	31042356	31104607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31059126_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31072871_31072999_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31098540_31098875_31099078_31099163_31100460_31100583_31104255
ES.18750.42	chr2	+	1856	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.470334711861	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAATCCAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	31042356	31082417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31067013_31067818_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ES.18750.43	chr2	+	5462	12	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.676064061574	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTTGGAAGGCTCATT	NA	False	NA	NA	False	NA	NA	NA	31042356	31108666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042455_31067787_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.44	chr2	+	6064	19	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	-315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	155.868623455068	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCTTGTGTCTGTGGT	NA	False	NA	14	True	AATAAA	-10	NA	31042356	31108472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079553_31079828_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.45	chr2	+	4478	18	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-6	-1729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	174.439190384124	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTGTATTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	31042356	31107058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31069453_31069600_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.46	chr2	+	1831	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	30	26370	-5	292	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAATCCAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	31042357	31082417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ES.18750.47	chr2	+	4487	17	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-4	1976	intron_retention	FALSE	canonical	1	139	junction_13	90.6628369289203	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAAGAGCAAGTGTTCA	NA	False	NA	12	True	AATAAA	-25	NA	31042358	31106554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.48	chr2	+	5668	19	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	128.094101212476	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTCACTGACAGTAG	NA	False	NA	4	True	ATTAAA	-19	NA	31042359	31108776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255_31106810_31107232
ES.18750.5	chr2	+	2907	14	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-5	25329	-5	1333	5prime_fragment	FALSE	canonical	2	275	junction_2	57.7895590577976	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCATAGGGGCTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	31042322	31083458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ES.18750.50	chr2	+	2464	16	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	30	31	intron_retention	FALSE	canonical	1	3	junction_12	121.584794370934	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	NA	False	NA	6	True	AGTAAA	-14	NA	31042392	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31075619_31078694_31078826_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.51	chr2	+	4286	20	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	90	1976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	187.832246721875	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAAGAGCAAGTGTTCA	NA	False	NA	12	True	AATAAA	-25	NA	31042452	31106554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31062902_31063079_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31098540_31098875_31099078_31099163_31100460_31100583_31104255
ES.18750.52	chr2	+	2102	18	NNC	ENSMUSG00000000194.14	novel	647	5	NA	NA	-8161	43	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	129.980568151112	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGAGCCTGGGTCTGT	NA	False	NA	18	True	AGTAAA	-26	NA	31054117	31104621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31054418_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.53	chr2	+	3604	16	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-5186	1979	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	136.597055442479	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGCAAGTGTTCAACT	NA	False	NA	15	True	AATAAA	-28	NA	31057092	31106557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.54	chr2	+	1357	12	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	24580	4178	4629	31	3prime_fragment	FALSE	canonical	1	139	junction_8	95.3977320103957	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	6442	False	NA	6	True	AGTAAA	-14	NA	31066907	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.55	chr2	+	4842	1	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-1993	-625	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	31073295	31078137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31073300_31078100
ES.18750.56	chr2	+	3399	2	ISM	ENSMUSG00000000194.14	ENSMUST00000151991.2	617	7	11318	-3274	-1692	-625	3prime_fragment	FALSE	canonical	3	435	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	31073596	31078137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31073668_31074809
ES.18750.57	chr2	+	5530	5	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	36607	2226	154	1983	3prime_fragment	FALSE	canonical	1	139	junction_1	131.459119120737	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGTGTTCAACTCTGA	NA	False	NA	19	True	AATAAA	-32	NA	31078934	31106561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.59	chr2	+	5976	1	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-2726	-181	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAAAAAAGCTC	NA	False	NA	NA	False	NA	NA	NA	31093917	31099893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31093900_31099900
ES.18750.6	chr2	+	5895	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-5	244	-5	-244	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTCCTCATGTTGTGG	NA	False	NA	18	True	NA	NA	NA	31042322	31108543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.60	chr2	+	3724	4	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	52249	4178	-2067	31	3prime_fragment	FALSE	canonical	3	346	junction_1	55.3794988139915	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTTGCTAATTGGGA	NA	False	NA	6	True	AGTAAA	-14	NA	31094576	31104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.61	chr2	+	4529	4	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	55361	261	1045	-261	3prime_fragment	FALSE	canonical	3	346	junction_1	55.3794988139915	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTCAGTGTTCATAC	NA	False	NA	1	True	NA	NA	NA	31097688	31108526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.62	chr2	+	2508	3	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	56750	2231	-1034	1978	3prime_fragment	FALSE	canonical	3	442	junction_1	17.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAGTGTTCAAC	NA	False	NA	14	True	AATAAA	-27	NA	31099077	31106556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31099163_31100460_31100583_31104255
ES.18750.63	chr2	+	8519	1	Genic_Genomic	ENSMUSG00000000194.14	novel	NA	NA	NA	NA	832	675	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATGGTGCTGAGGCCTC	NA	False	NA	NA	False	NA	NA	NA	31100943	31109462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_31100900_31109500
ES.18750.64	chr2	+	3520	2	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	4467	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTTCATACAGTTCC	NA	False	NA	7	True	NA	NA	NA	31104578	31108532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31104809_31105242
ES.18750.65	chr2	+	2301	1	Genic_Genomic	ENSMUSG00000000194.14	novel	NA	NA	NA	NA	8141	1766	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCTGGAAAGATGTGCT	NA	False	NA	NA	False	TATAAA	-1	NA	31108252	31110553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_31108300_31110600
ES.18750.7	chr2	+	1973	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	-5	4166	-5	43	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGAGCCTGGGTCTGT	NA	False	NA	18	True	AGTAAA	-26	NA	31042322	31104621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ES.18750.8	chr2	+	1962	14	NIC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	-5	-260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	129.148783517398	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31042322	31099814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31097690_31097741_31099078
ES.18751.1	chr2	-	4731	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	-14	5	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGTTGTATGAAGAAA	4754	False	NA	0	True	AATAAA	-23	NA	31032034	30916212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.10	chr2	-	4596	15	NNC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.1340718544771	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4781	False	NA	-6	True	AATAAA	-17	NA	31032007	30916218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930541_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_31031790
ES.18751.12	chr2	-	8326	12	ISM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	45755	-6791	453	0	3prime_fragment	FALSE	canonical	3	84	junction_6	23.3326642957999	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTCTCTGTTGTAT	NA	False	NA	-7	True	AATAAA	-16	NA	30986059	30916219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038
ES.18751.13	chr2	-	4545	14	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	44.9715228763991	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTCTCTGTTGTAT	4765	False	NA	-7	True	AATAAA	-16	NA	31032023	30916219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.14	chr2	-	4854	17	Fusion	ENSMUSG00000075415.14_ENSMUSG00000087269.2	novel	4726	17	NA	NA	36	0	multi-exon	FALSE	canonical	2	3	junction_15	49.0856633218906	553	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTCTCTGTTGTAT	8922	False	NA	-7	True	AATAAA	-16	NA	31042267	30916219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31041162_31041263_31041993
ES.18751.16	chr2	-	4581	15	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	42.575323407642	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTCTCTGTTGTAT	4781	False	NA	-7	True	AATAAA	-16	NA	31032007	30916219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_31031790
ES.18751.17	chr2	-	4112	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTTTTTTTTTTCTATG	4780	False	NA	0	True	AATAAA	-17	NA	31032008	30916805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.18	chr2	-	3940	15	FSM	ENSMUSG00000075415.14	ENSMUST00000113562.9	4515	15	-13	588	-1	-1	multi-exon	FALSE	canonical	0	0	junction_6	43.3373101262595	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTTTTTTTTTTCTA	4767	False	NA	-2	True	AATAAA	-15	NA	31032021	30916807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.19	chr2	-	5649	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-405	-3385	-199	-1419	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGTATTTTAAGTGAT	4569	False	NA	-13	True	AATAAA	-19	NA	31032219	30919625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.20	chr2	-	5330	14	NIC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	3	-1420	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	43.1898245741466	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTGTATTTTAAGTGA	4771	False	NA	-14	True	AATAAA	-18	NA	31032017	30919626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_31031790
ES.18751.23	chr2	-	4269	7	NIC	ENSMUSG00000075415.14	novel	1761	15	NA	NA	1326	-1421	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	53.5550080654358	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	NA	False	NA	-15	True	AATAAA	-17	NA	30944130	30919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30923201_30926129_30926270_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943093_30944035
ES.18751.24	chr2	-	5360	15	NIC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	5	-1421	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.01424590733	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGTATTTTAAGTG	4826	False	NA	-15	True	AATAAA	-17	NA	31031962	30919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943150_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.28	chr2	-	7069	5	ISM	ENSMUSG00000075415.14	ENSMUST00000128431.3	1064	10	9642	-1181	9642	784	intron_retention	FALSE	canonical	3	114	junction_2	8.64580823289529	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCCATATCCAGCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	30935814	30921921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416
ES.18751.29	chr2	-	3276	16	Fusion	ENSMUSG00000075415.14_ENSMUSG00000087269.2	novel	1859	15	NA	NA	53	779	multi-exon	FALSE	canonical	2	3	junction_14	50.1351063516264	526	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATCCAGCCATATCCA	8939	False	NA	NA	False	AATAAA	-15	NA	31042250	30921926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31041162_31041263_31041993
ES.18751.30	chr2	-	2954	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-191	-904	3	599	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGGCCATGTGGGAAT	4783	False	NA	NA	False	AGTAAA	-26	NA	31032005	30922106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.31	chr2	-	2481	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-207	-415	-1	110	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCCTGGAACGTTCTC	4767	False	NA	NA	False	AATAAA	-18	NA	31032021	30922595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.32	chr2	-	3257	5	ISM	ENSMUSG00000075415.14	ENSMUST00000128431.3	1064	10	12779	-506	12779	109	3prime_fragment	FALSE	canonical	3	114	junction_2	8.64580823289529	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGCCTGGAACGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	30932677	30922596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416
ES.18751.33	chr2	-	2219	15	NNC	ENSMUSG00000075415.14	novel	1859	15	NA	NA	0	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.0685813392148	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATCTGTGTCGTTTGAA	4780	False	NA	NA	False	NA	NA	NA	31032008	30922845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30923201_30926129_30926270_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995364_31031786
ES.18751.34	chr2	-	2273	9	NNC	ENSMUSG00000075415.14	novel	1910	9	NA	NA	4	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3346114369101	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTTCTGATTTTTTT	4784	False	NA	2	True	NA	NA	NA	31032004	30943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_30944526_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.35	chr2	-	1981	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	-67	-4	2	4	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGTCTTCTTGTTT	4770	False	NA	-9	True	NA	NA	NA	31032018	30943242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.36	chr2	-	157	1	Intergenic	novelGene_15541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	30949347	30949190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30949200_30949300
ES.18751.37	chr2	-	3032	2	Intergenic	novelGene_15542	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAACAA	NA	False	NA	NA	False	AATACA	-37	NA	30956244	30949960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30951791_30955042
ES.18751.38	chr2	-	631	2	Intergenic	novelGene_15543	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	30952861	30950008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30950354_30952575
ES.18751.39	chr2	-	5636	1	Intergenic	novelGene_15546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACAATATGAAATAACCA	1872	False	NA	NA	False	NA	NA	NA	30966019	30960383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30960400_30966000
ES.18751.4	chr2	-	4684	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	41.1012841107861	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4766	False	NA	-5	True	AATAAA	-18	NA	31032022	30916217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943150_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.40	chr2	-	160	1	Intergenic	novelGene_15547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	7179	False	NA	NA	False	NA	NA	NA	30975024	30974864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30974900_30975000
ES.18751.41	chr2	-	158	1	Intergenic	novelGene_15549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30988011	30987853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_30987900_30988000
ES.18751.42	chr2	-	181	1	Intergenic	novelGene_15551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCTCTT	762	False	NA	NA	False	NA	NA	NA	31036026	31035845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31035800_31036000
ES.18751.43	chr2	-	2087	2	Intergenic	novelGene_15552	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTTTGTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	31040461	31037684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31038528_31039217
ES.18751.44	chr2	-	1769	3	NNC	ENSMUSG00000087269.2	novel	920	2	NA	NA	37	1050	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTATTCTATTTTAT	8923	False	NA	NA	False	NA	NA	NA	31042266	31039602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31040489_31040652_31041263_31041993
ES.18751.45	chr2	-	1747	3	NNC	ENSMUSG00000087269.2	novel	920	2	NA	NA	36	1029	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	8922	False	NA	NA	False	NA	NA	NA	31042267	31039623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31040479_31040644_31041263_31041993
ES.18751.46	chr2	-	2541	2	NNC	ENSMUSG00000087269.2	novel	920	2	NA	NA	-25	1029	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	8861	False	NA	NA	False	NA	NA	NA	31042328	31039623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31040489_31040652
ES.18751.48	chr2	-	1770	1	NIC	ENSMUSG00000087269.2	novel	577	3	NA	NA	19	138	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	8905	False	NA	NA	False	NA	NA	NA	31042284	31040514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_31040500_31042300
ES.18751.49	chr2	-	465	2	FSM	ENSMUSG00000087269.2	ENSMUST00000133550.2	920	2	45	410	45	-410	multi-exon	FALSE	canonical	3	14	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTTTTTATGTTGTT	8931	False	NA	NA	False	TATAAA	-20	NA	31042258	31041062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_31041263_31041993
ES.18751.6	chr2	-	4455	14	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	43.0912064231894	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTCTGTTGTATGA	4820	False	NA	-5	True	AATAAA	-18	NA	31031968	30916217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30995253_30995370_31031790
ES.18751.7	chr2	-	4644	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	41.1012841107861	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4748	False	NA	-6	True	AATAAA	-17	NA	31032040	30916218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943093_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.8	chr2	-	4516	15	FSM	ENSMUSG00000075415.14	ENSMUST00000113562.9	4515	15	0	-1	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.3373101262595	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4780	False	NA	-6	True	AATAAA	-17	NA	31032008	30916218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18751.9	chr2	-	4781	17	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	52.6539409731124	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4782	False	NA	-6	True	AATAAA	-17	NA	31032006	30916218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30938216_30938301_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ES.18752.1	chr2	-	177	1	Intergenic	novelGene_15553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	3155	False	NA	NA	False	NA	NA	NA	31051048	31050871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31050900_31051000
ES.18753.1	chr2	-	171	1	Intergenic	novelGene_15554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATCAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	31065488	31065317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31065300_31065500
ES.18754.1	chr2	-	180	1	Intergenic	novelGene_15555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCAATCTGGAACCCC	NA	False	NA	NA	False	NA	NA	NA	31089872	31089692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31089700_31089900
ES.18755.1	chr2	+	181	1	Intergenic	novelGene_15556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACATATTCAAAC	NA	False	NA	NA	False	NA	NA	NA	31118885	31119066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31118900_31119100
ES.18756.1	chr2	-	157	1	Intergenic	novelGene_15557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31119564	31119407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31119400_31119600
ES.18757.1	chr2	+	4314	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-164	503	-164	-503	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTGGCATTAGGTT	NA	False	NA	21	True	AATAAA	-33	NA	31135670	31185498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18757.2	chr2	+	4813	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	-160	0	-160	0	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTGTGAGCCTGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	31135674	31186001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18757.3	chr2	+	3643	3	NIC	ENSMUSG00000062661.7	novel	4653	8	NA	NA	-10	-518	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGGTCCCATCTTCTG	NA	False	NA	6	True	AATAAA	-18	NA	31135824	31185483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31136255_31160623_31160649_31182295
ES.18757.4	chr2	+	1239	9	NNC	ENSMUSG00000062661.7	novel	4653	8	NA	NA	1	300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.2540978100968	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAACAAACTACCTT	NA	False	NA	NA	False	NA	NA	NA	31135835	31182631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31135905_31135947_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18757.5	chr2	+	1312	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	18	3323	18	347	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCCTCTGTCTCAGAG	NA	False	NA	NA	False	AAGAAA	-40	NA	31135852	31182678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18757.7	chr2	+	1832	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	48	2773	48	897	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAGAAAATGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	31135882	31183228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18757.8	chr2	+	7946	6	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	30582	523	30239	-523	3prime_fragment	FALSE	canonical	3	33	junction_4	8.00999375780031	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACAGTTGGTCCCATC	NA	False	NA	1	True	AATAAA	-41	NA	31166416	31185478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ES.18758.1	chr2	-	175	1	Intergenic	novelGene_15558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	31142220	31142045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31142000_31142200
ES.18759.1	chr2	+	3104	18	ISM	ENSMUSG00000055632.19	ENSMUST00000113532.9	15646	98	-165	98280	-165	-43356	5prime_fragment	TRUE	canonical	0	0	junction_1	0.322189739708921	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTCCCTGCTTACTG	NA	False	NA	NA	False	NA	NA	NA	31204261	31252470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31204689_31223866_31223938_31225425_31225585_31226518_31226642_31233067_31233240_31234023_31234131_31234480_31234602_31236473_31236738_31239989_31240135_31240530_31240653_31242620_31242894_31243727_31243870_31244177_31244306_31244633_31244748_31246235_31246386_31250892_31251082_31251808_31251905_31252169
ES.1876.1	chr1	+	175	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTAGCATCTGAGG	NA	False	NA	NA	False	NA	NA	NA	171009383	171009558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171009400_171009600
ES.18760.1	chr2	+	7473	46	NNC	ENSMUSG00000055632.19	novel	2879	14	NA	NA	7911	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.88150141527233	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTTGCTGAGTTAT	5010	False	NA	NA	False	TATAAA	-22	NA	31298199	31350752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31298297_31298942_31299162_31301260_31301375_31301732_31301921_31302485_31302583_31303265_31303428_31303578_31303693_31304538_31304742_31305212_31305295_31306721_31306854_31309833_31309978_31310069_31310230_31310309_31310435_31310784_31310969_31312614_31312713_31313101_31313369_31313903_31314095_31314208_31314291_31314377_31314515_31315149_31315292_31315365_31315511_31316156_31316285_31316808_31316966_31318199_31318322_31318966_31319132_31320350_31320459_31320726_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.10	chr2	+	1716	7	NNC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.915076220022	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGTCTTTGCTGAGT	NA	False	NA	NA	False	TATAAA	-19	NA	31344511	31350749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31344703_31344816_31344940_31345501_31345639_31347071_31347201_31347744_31348066_31349092_31349220_31350061
ES.18760.11	chr2	+	4330	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-95	1	intron_retention	FALSE	canonical	2	7	junction_3	6.98212002188447	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTTTGCTGAGTTA	NA	False	NA	NA	False	TATAAA	-21	NA	31344624	31350751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31344703_31344816_31344940_31345503_31348816_31349092_31349220_31350061
ES.18760.12	chr2	+	2642	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	3	-2	intron_retention	FALSE	canonical	2	13	junction_1	5.35607132140714	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGATGTCTTTGCTGA	NA	False	NA	NA	False	TATAAA	-17	NA	31344722	31350747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
ES.18760.2	chr2	+	6228	35	NNC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-18311	2	intron_retention	FALSE	canonical	0	0	junction_1	7.5791098800845	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTTGCTGAGTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	31309762	31350752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31310230_31310309_31310435_31310784_31310969_31312614_31312713_31313101_31313369_31313903_31314095_31314208_31314291_31314377_31314515_31315149_31315292_31315365_31315511_31316156_31316285_31316808_31316966_31318199_31318322_31318966_31319132_31320350_31320459_31320726_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.3	chr2	+	5900	32	NNC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-15791	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.85137699436196	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGATGTCTTTGCTGAG	NA	False	NA	NA	False	TATAAA	-18	NA	31312282	31350748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31312713_31313101_31313369_31313903_31314095_31314208_31314291_31314377_31314515_31315149_31315292_31315365_31315511_31316156_31316285_31316808_31316966_31318199_31318322_31318966_31319132_31320350_31320459_31320606_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.4	chr2	+	5741	21	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-9644	4	intron_retention	FALSE	canonical	0	0	junction_6	8.94021811814454	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTGCTGAGTTATTT	4090	False	NA	NA	False	TATAAA	-24	NA	31318429	31350754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31320459_31320726_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.5	chr2	+	4397	20	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-8042	-5	intron_retention	FALSE	canonical	0	0	junction_5	9.11514523066842	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTGATGTCTTTGC	5692	False	NA	NA	False	TATAAA	-14	NA	31320031	31350744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.6	chr2	+	5446	2	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-257	0	intron_retention	FALSE	canonical	3	25	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31344462	31350750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31349220_31350061
ES.18760.7	chr2	+	1855	8	ISM	ENSMUSG00000055632.19	ENSMUST00000142448.8	2495	13	7744	0	-229	0	3prime_fragment	FALSE	canonical	2	7	junction_6	7.07106781186548	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGTCTTTGCTGAGT	NA	False	NA	NA	False	TATAAA	-19	NA	31344490	31350749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ES.18760.8	chr2	+	4730	4	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-220	0	intron_retention	FALSE	canonical	2	13	junction_2	4.98887651569859	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGTCTTTGCTGAGT	NA	False	NA	NA	False	TATAAA	-19	NA	31344499	31350749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31344703_31344816_31344940_31345503_31349220_31350061
ES.18760.9	chr2	+	2619	5	NIC	ENSMUSG00000055632.19	novel	2495	13	NA	NA	-215	0	intron_retention	FALSE	canonical	0	0	junction_3	9.54921462739214	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGTCTTTGCTGAGT	NA	False	NA	NA	False	TATAAA	-19	NA	31344504	31350749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347744_31349220_31350061
ES.18761.1	chr2	-	175	1	Intergenic	novelGene_15559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGCCACCG	NA	False	NA	NA	False	NA	NA	NA	31306578	31306403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31306400_31306600
ES.18762.1	chr2	-	3989	1	Antisense	novelGene_ENSMUSG00000055632.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATGATTATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	31326526	31322537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_31322500_31326500
ES.18763.1	chr2	+	1652	16	NNC	ENSMUSG00000076441.10	novel	485	4	NA	NA	-256	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	742.141585772778	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTGCGTGTGTGC	NA	False	NA	26	True	ATTAAA	-21	NA	31359962	31410683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360053_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.10	chr2	+	1730	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	94	-128	94	128	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATATATGTTATATAT	NA	False	NA	NA	False	NA	NA	NA	31360312	31410812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.11	chr2	+	1609	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	94	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	741.552287809535	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTGCGTGTGTGC	NA	False	NA	26	True	ATTAAA	-21	NA	31360312	31410683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360352_31364718_31364783_31366897_31367016_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.15	chr2	+	1664	17	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	963.720192470304	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCTCTGCGTGTGT	NA	False	NA	24	True	ATTAAA	-19	NA	31360313	31410681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31388743_31388810_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.16	chr2	+	5486	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-5	intron_retention	FALSE	canonical	3	2348	junction_1	250.998505971649	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTGTCTCTGCGTGT	NA	False	NA	22	True	ATTAAA	-17	NA	31360313	31410679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31408804_31410383
ES.18763.17	chr2	+	1571	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	714.449139780666	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTTACATTAGTCT	NA	False	NA	3	True	CATAAA	-10	NA	31360313	31410660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410389
ES.18763.18	chr2	+	3571	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	95	-1	intron_retention	FALSE	canonical	3	2348	junction_1	260.872095096428	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTGCGTGTGTGC	NA	False	NA	26	True	ATTAAA	-21	NA	31360313	31410683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.2	chr2	+	1744	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	-42	-6	-42	6	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGTGTGCCTGTGTG	NA	False	NA	33	True	ATTAAA	-28	NA	31360176	31410690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.20	chr2	+	3390	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	96	-1790	96	1790	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACATAAAAACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	31360314	31412474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.21	chr2	+	1570	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	96	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	743.155901095681	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTTACATTAGTCT	NA	False	NA	3	True	CATAAA	-10	NA	31360314	31410660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400244_31404686_31404848_31408737_31408804_31410383
ES.18763.22	chr2	+	1516	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	96	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	765.904670494778	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTTATTTGTCTCTGC	NA	False	NA	18	True	ATTAAA	-13	NA	31360314	31410675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.23	chr2	+	1390	6	ISM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	99	33260	99	-22743	5prime_fragment	FALSE	canonical	3	2348	junction_1	246.695439763284	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAAGGAG	NA	False	NA	NA	False	NA	NA	NA	31360317	31377424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500
ES.18763.25	chr2	+	7765	1	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	9436	-22748	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	31369654	31377419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31369700_31377400
ES.18763.27	chr2	+	5423	11	ISM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	11988	2	11988	-2	3prime_fragment	FALSE	canonical	3	2563	junction_5	249.195585835705	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31372206	31410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.29	chr2	+	5336	5	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	389	-7	intron_retention	FALSE	canonical	3	2563	junction_1	326.263218123036	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTGTCTCTGCGT	NA	False	NA	20	True	ATTAAA	-15	NA	31388172	31410677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31388250_31390844_31391565_31400121_31400254_31404690_31408804_31410383
ES.18763.3	chr2	+	6787	5	ISM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	40	33247	40	-22730	intron_retention	FALSE	canonical	3	2348	junction_1	256.274267143621	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAGAGAGAGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	31360258	31377437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986
ES.18763.30	chr2	+	3099	6	ISM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	28316	17	751	-17	3prime_fragment	FALSE	canonical	3	2632	junction_1	282.949748188614	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACATTAGTCTTTTATTT	NA	False	NA	10	True	ATTAAA	-5	NA	31388534	31410667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.31	chr2	+	672	5	NNC	ENSMUSG00000076441.10	novel	462	2	NA	NA	2556	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1369.75168826324	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31393293	31410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31393312_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.32	chr2	+	2583	3	ISM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	42411	2	-5872	-2	3prime_fragment	FALSE	canonical	3	3074	junction_1	181.5	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31402629	31410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31404848_31408737_31408804_31410383
ES.18763.33	chr2	+	4301	1	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	-2120	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	951	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTCTGCGTGTGTG	NA	False	NA	25	True	ATTAAA	-20	NA	31406381	31410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31406400_31410700
ES.18763.4	chr2	+	1574	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	46	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	764.036968867291	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTGTCTCTGCGT	NA	False	NA	20	True	ATTAAA	-15	NA	31360264	31410677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.6	chr2	+	1626	16	NNC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	56	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	745.863240368724	967	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTGTCTCTGCGT	NA	False	NA	20	True	ATTAAA	-15	NA	31360274	31410677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388165_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18763.7	chr2	+	1470	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	93	-1	combination_of_known_splicesites	FALSE	canonical	3	195	junction_12	721.33651817233	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTGCGTGTGTGC	NA	False	NA	26	True	ATTAAA	-21	NA	31360311	31410683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31404690_31404848_31408737_31408804_31410383
ES.18763.8	chr2	+	2353	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	94	-9	intron_retention	FALSE	canonical	3	2348	junction_1	261.114809762968	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTTATTTGTCTCTGC	NA	False	NA	18	True	ATTAAA	-13	NA	31360312	31410675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ES.18764.1	chr2	-	1076	2	Antisense	novelGene_ENSMUSG00000076441.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGCGCCACAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	31380642	31379069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_31379565_31380061
ES.18764.2	chr2	-	1573	1	Intergenic	novelGene_15560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGCGCCACAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	31380642	31379069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31379100_31380600
ES.18765.1	chr2	+	207	1	Intergenic	novelGene_15561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAGGAGTCAATTAGT	NA	False	NA	NA	False	NA	NA	NA	31421596	31421803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31421600_31421800
ES.18766.1	chr2	+	134	1	Intergenic	novelGene_15562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	31442797	31442931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31442800_31442900
ES.18767.1	chr2	+	3293	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	-23	-2	-23	2	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGCTGGCCCC	470	False	NA	38	True	AATAAA	-39	NA	31462639	31507540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.10	chr2	+	3702	18	NNC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	8	-98	intron_retention	FALSE	canonical	0	0	junction_6	164.457922595715	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTTGTTTTTTAAA	501	False	NA	8	True	ATTAAA	-17	NA	31462670	31507432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488554_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.13	chr2	+	3291	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_2	250.389288604267	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTTGTTTGCTGGC	508	False	NA	35	True	AATAAA	-36	NA	31462677	31507537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31485271_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.14	chr2	+	2815	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	16	437	16	373	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCAGGGTGTTTTTGCT	509	False	NA	NA	False	ATTAAA	-31	NA	31462678	31507101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.15	chr2	+	4514	17	ISM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	16	6	16	0	intron_retention	FALSE	canonical	3	582	junction_10	51.7868226482375	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	509	False	NA	30	True	AATAAA	-31	NA	31462678	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722
ES.18767.18	chr2	+	3207	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	17	-97	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTTGTTTTTTAAAG	510	False	NA	9	True	ATTAAA	-18	NA	31462679	31507433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.19	chr2	+	710	3	NNC	ENSMUSG00000026843.16	novel	372	5	NA	NA	17	538	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	350	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGGCAGATATGGATGA	510	False	NA	NA	False	AATAAA	-11	NA	31462679	31475451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31475133
ES.18767.2	chr2	+	2993	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	-16	291	-16	-283	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTAGTGTATCTGTACA	477	False	NA	NA	False	AATAAA	-25	NA	31462646	31507247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.20	chr2	+	3699	16	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_2	170.455546502111	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	513	False	NA	28	True	AATAAA	-29	NA	31462682	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31485271_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.22	chr2	+	3497	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-142	293	24	-292	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTACTGTAGTGT	517	False	NA	NA	False	AATAAA	-16	NA	31462686	31507238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.23	chr2	+	3227	18	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	24	0	intron_retention	FALSE	canonical	3	48	junction_16	190.586020321189	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	517	False	NA	30	True	AATAAA	-31	NA	31462686	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505699_31506190
ES.18767.24	chr2	+	2123	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	209.949435417433	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTCTTAGTCTGTTT	520	False	NA	24	True	AATAAA	-25	NA	31462689	31507526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190_31506235_31507268
ES.18767.25	chr2	+	3105	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	34	-16	intron_retention	FALSE	canonical	0	0	junction_8	166.537234632472	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTGGGCAAAGTGTT	527	False	NA	12	True	AATAAA	-13	NA	31462696	31507514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.27	chr2	+	3700	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	60	2	intron_retention	FALSE	canonical	3	25	junction_13	159.424243784228	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTCTGTTTTGTTTGCT	553	False	NA	32	True	AATAAA	-33	NA	31462722	31507534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.28	chr2	+	3023	20	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	60	-293	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	203.517448393385	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAATGTTTACTGTAGTG	553	False	NA	NA	False	AATAAA	-15	NA	31462722	31507237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31483416_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.3	chr2	+	3833	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	-178	-7	-12	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	481	False	NA	36	True	AATAAA	-37	NA	31462650	31507538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.31	chr2	+	3679	17	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	64	0	intron_retention	FALSE	canonical	3	48	junction_16	158.8952952222	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	557	False	NA	30	True	AATAAA	-31	NA	31462726	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509
ES.18767.33	chr2	+	3051	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-8	-20	intron_retention	FALSE	canonical	1	1	junction_5	164.305092983288	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTCTTGTGGGCAAAG	625	False	NA	8	True	AATAAA	-9	NA	31462794	31507510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485277_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.38	chr2	+	3558	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_5	217.783518429779	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	635	False	NA	30	True	AATAAA	-31	NA	31462804	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.39	chr2	+	2649	18	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	345	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	190.586020321189	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAAAAAATGTAGTAAC	636	False	NA	NA	False	ATTAAA	-3	NA	31462805	31507073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505699_31506190
ES.18767.4	chr2	+	3332	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-7	2	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTCTGTTTTGTTTGCT	486	False	NA	32	True	AATAAA	-33	NA	31462655	31507534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.40	chr2	+	3068	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_17	227.81631787771	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	636	False	NA	30	True	AATAAA	-31	NA	31462805	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504763_31505586_31505699_31506190
ES.18767.42	chr2	+	3170	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_6	192.966390280219	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	639	False	NA	30	True	AATAAA	-31	NA	31462808	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486657_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.43	chr2	+	3016	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	146	106	5	-98	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTTGTTTTTTAAA	639	False	NA	8	True	ATTAAA	-17	NA	31462808	31507432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.44	chr2	+	3764	18	NNC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_10	253.396471219111	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	640	False	NA	30	True	AATAAA	-31	NA	31462809	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31497734_31497889_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.46	chr2	+	3783	19	NNC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	8	1	intron_retention	FALSE	canonical	1	2	junction_3	207.190144970362	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	642	False	NA	31	True	AATAAA	-32	NA	31462811	31507533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31483416_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.47	chr2	+	2623	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	8	348	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	158.592795361216	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGTAGTAACTAT	642	False	NA	NA	False	ATTAAA	-6	NA	31462811	31507076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.48	chr2	+	3089	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_4	164.638399133179	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	645	False	NA	28	True	AATAAA	-29	NA	31462814	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484909_31485284_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.5	chr2	+	3400	20	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_13	206.433935023014	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	488	False	NA	30	True	AATAAA	-31	NA	31462657	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.50	chr2	+	2946	20	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-10	-338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	223.714313763839	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGAGTTAAATAATTTT	646	False	NA	NA	False	NA	NA	NA	31462815	31507192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31483416_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.52	chr2	+	3074	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-9	0	intron_retention	FALSE	canonical	3	25	junction_2	158.592795361216	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	647	False	NA	30	True	AATAAA	-31	NA	31462816	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.53	chr2	+	3211	20	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-5	-7	intron_retention	FALSE	canonical	1	2	junction_3	203.517448393385	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAAGTGTTCTTAGTCTG	651	False	NA	21	True	AATAAA	-22	NA	31462820	31507523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31483416_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.54	chr2	+	3754	18	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_12	247.227421464277	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	651	False	NA	28	True	AATAAA	-29	NA	31462820	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.55	chr2	+	3547	17	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	167.327324707443	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	656	False	NA	30	True	AATAAA	-31	NA	31462825	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.57	chr2	+	3614	17	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_2	159.216919150416	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	660	False	NA	30	True	AATAAA	-31	NA	31462829	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.58	chr2	+	3023	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_14	169.088928507885	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	660	False	NA	30	True	AATAAA	-31	NA	31462829	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.59	chr2	+	2346	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	167	755	1	55	multi-exon	FALSE	canonical	3	465	junction_18	67.3624112131124	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTGTAATTAATGATG	660	False	NA	NA	False	TTTAAA	-16	NA	31462829	31506783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.6	chr2	+	3027	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	2	-292	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_18	127.170586318894	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTACTGTAGTGT	495	False	NA	NA	False	AATAAA	-16	NA	31462664	31507238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.60	chr2	+	3087	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_18	160.283776124999	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	660	False	NA	30	True	AATAAA	-31	NA	31462829	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505630_31506190
ES.18767.61	chr2	+	2982	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	0	intron_retention	FALSE	canonical	1	4	junction_1	213.021807938623	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	660	False	NA	28	True	AATAAA	-29	NA	31462829	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31482474_31482509_31484859_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.62	chr2	+	3268	20	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	4	2	intron_retention	FALSE	canonical	1	2	junction_3	247.643184469923	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTCTGTTTTGTTTGCT	663	False	NA	32	True	AATAAA	-33	NA	31462832	31507534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482477_31482509_31483416_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.63	chr2	+	3486	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	5	-99	intron_retention	FALSE	canonical	3	25	junction_13	159.424243784228	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCATGTTGTTTTTTAA	664	False	NA	7	True	ATTAAA	-16	NA	31462833	31507431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.64	chr2	+	3152	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_13	164.640348774061	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	666	False	NA	30	True	AATAAA	-31	NA	31462835	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501815_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.65	chr2	+	3635	18	NNC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	164.903452932094	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	666	False	NA	30	True	AATAAA	-31	NA	31462835	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484898_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.68	chr2	+	2876	17	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	-7	intron_retention	FALSE	canonical	2	5	junction_16	168.777914357892	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAAGTGTTCTTAGTCTG	670	False	NA	21	True	AATAAA	-22	NA	31462839	31507523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31506190
ES.18767.69	chr2	+	3454	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	1	1	intron_retention	FALSE	canonical	1	3	junction_17	217.154307071227	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	670	False	NA	31	True	AATAAA	-32	NA	31462839	31507533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31506190
ES.18767.7	chr2	+	3187	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	48	junction_16	158.982817726256	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	496	False	NA	30	True	AATAAA	-31	NA	31462665	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
ES.18767.71	chr2	+	4299	16	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_5	173.979258022967	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTTGTTTGCTGGC	671	False	NA	35	True	AATAAA	-36	NA	31462840	31507537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722
ES.18767.72	chr2	+	3146	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	12	490	2	313	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTTAACAAACACTGT	671	False	NA	NA	False	ATTAAA	-14	NA	31462840	31507041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.73	chr2	+	2903	17	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	5	0	intron_retention	FALSE	canonical	1	4	junction_1	218.14214653237	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	674	False	NA	30	True	AATAAA	-31	NA	31462843	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
ES.18767.74	chr2	+	2971	17	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	6	-16	intron_retention	FALSE	non_canonical	0	0	junction_2	169.05232178234	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTGGGCAAAGTGTT	675	False	NA	12	True	AATAAA	-13	NA	31462844	31507514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31485268_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.75	chr2	+	3234	20	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_11	205.976466396385	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	675	False	NA	30	True	AATAAA	-31	NA	31462844	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31497734_31497889_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.76	chr2	+	4984	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_10	210.11980709427	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTAGTCTGTTTTGTTT	676	False	NA	29	True	AATAAA	-30	NA	31462845	31507531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31497734_31497889_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.77	chr2	+	2968	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_12	163.962554065867	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	681	False	NA	30	True	AATAAA	-31	NA	31462850	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501696_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.78	chr2	+	3730	18	NNC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_2	250.839779851022	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	683	False	NA	30	True	AATAAA	-31	NA	31462852	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31462966_31473166_31473273_31483388_31483533_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502916_31503042_31503120_31504722_31504795_31505509
ES.18767.8	chr2	+	3943	19	NIC	ENSMUSG00000026843.16	novel	3648	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	12	junction_13	209.932323016046	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	496	False	NA	28	True	AATAAA	-29	NA	31462665	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.80	chr2	+	3265	20	NNC	ENSMUSG00000026843.16	novel	908	9	NA	NA	10009	1	intron_retention	FALSE	canonical	0	0	junction_1	242.659183268173	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	2548	False	NA	31	True	AATAAA	-32	NA	31472847	31507533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31473020_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.81	chr2	+	1027	1	Intergenic	novelGene_15564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	625	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAAAAAGACCC	1966	False	NA	NA	False	NA	NA	NA	31476680	31477707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31476700_31477700
ES.18767.82	chr2	+	179	1	Intergenic	novelGene_15565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	977	False	NA	NA	False	NA	NA	NA	31477841	31478020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31477800_31478000
ES.18767.83	chr2	+	2917	17	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-10810	1	intron_retention	FALSE	canonical	3	154	junction_16	133.047086941992	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTCTGTTTTGTTTGC	5608	False	NA	31	True	AATAAA	-32	NA	31482472	31507533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.85	chr2	+	4918	15	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-8643	0	intron_retention	FALSE	canonical	3	465	junction_14	65.7341584858035	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	7775	False	NA	28	True	AATAAA	-29	NA	31484639	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31484905_31485261_31485334_31486605_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.86	chr2	+	4651	13	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-6690	-4	intron_retention	FALSE	canonical	3	154	junction_12	146.470963182317	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTCTTAGTCTGTTT	83	False	NA	24	True	AATAAA	-25	NA	31486592	31507526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.87	chr2	+	2762	14	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-4662	0	intron_retention	FALSE	canonical	3	12	junction_7	256.680724018848	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	2111	False	NA	30	True	AATAAA	-31	NA	31488620	31507532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
ES.18767.88	chr2	+	4883	10	ISM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	26495	1	-3959	0	intron_retention	FALSE	canonical	3	582	junction_3	53.0534321855492	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	247	False	NA	28	True	AATAAA	-29	NA	31489323	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722
ES.18767.89	chr2	+	2417	10	NNC	ENSMUSG00000026843.16	novel	843	5	NA	NA	2737	3	intron_retention	FALSE	canonical	0	0	junction_1	259.131359986388	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGTTTTGTTTGCTG	5128	False	NA	33	True	AATAAA	-34	NA	31497454	31507535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31497517_31497604_31497889_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.9	chr2	+	4318	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	3	-19	intron_retention	FALSE	canonical	0	0	junction_1	163.449363548606	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTCTTGTGGGCAAAGT	496	False	NA	9	True	AATAAA	-10	NA	31462665	31507511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31464046_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ES.18767.90	chr2	+	2483	6	ISM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	38760	-3	-954	2	3prime_fragment	FALSE	canonical	3	612	junction_2	17.6748408762286	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTCTGTTTTGTTTGCT	9262	False	NA	32	True	AATAAA	-33	NA	31501588	31507534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ES.18767.91	chr2	+	1929	7	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	-896	0	intron_retention	FALSE	canonical	3	12	junction_1	282.131765906169	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTAGTCTGTTTTGTT	9320	False	NA	28	True	AATAAA	-29	NA	31501646	31507530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
ES.18768.1	chr2	-	183	1	Intergenic	novelGene_15563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTGGCTGGAATG	8881	False	NA	NA	False	NA	NA	NA	31472319	31472136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31472100_31472300
ES.18769.1	chr2	-	2152	1	Antisense	novelGene_ENSMUSG00000026843.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTTTTATCACTAAGAG	NA	False	NA	NA	False	NA	NA	NA	31499382	31497230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_31497200_31499400
ES.1877.1	chr1	+	1817	5	Antisense	novelGene_ENSMUSG00000038370.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATATAT	NA	False	NA	NA	False	AAAAAG	-13	NA	171017256	171032936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_171017453_171017892_171017989_171018303_171018664_171031445_171031606_171031931
ES.18770.1	chr2	+	221	1	Intergenic	novelGene_15566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCCACACCTGGGTAAG	NA	False	NA	NA	False	AATGAA	-20	NA	31555707	31555928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31555700_31555900
ES.18770.10	chr2	+	1587	9	NNC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	306.905421099074	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGAGTCTCACCGCGT	NA	False	NA	NA	False	AATAAA	-16	NA	31560743	31571361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565885_31566729_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.14	chr2	+	3720	4	Fusion	ENSMUSG00000039356.16_ENSMUSG00000026842.17	novel	847	2	NA	NA	0	1	multi-exon	TRUE	canonical	0	0	junction_1	86.3108078722216	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGGTCTGTGATTCA	NA	False	NA	21	True	AATAAA	-22	NA	31560745	31693554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_31560874_31686984_31687075_31687574_31687740_31690217
ES.18770.15	chr2	+	1635	9	NIC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	1	-44	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	302.080054579908	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31560746	31571317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31560874_31562483_31562599_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.16	chr2	+	10113	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-231	-3555	-56	2869	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGCTCAATGGAAAATT	5523	False	NA	NA	False	AATAAA	-18	NA	31578331	31697108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.17	chr2	+	6555	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-225	-3	-50	3	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCTGTGATTCATC	5529	False	NA	23	True	AATAAA	-24	NA	31578337	31693556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.18	chr2	+	9023	10	ISM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-218	0	-43	0	intron_retention	FALSE	canonical	3	69	junction_1	38.8987289138233	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	5536	False	NA	20	True	AATAAA	-21	NA	31578344	31693553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574
ES.18770.19	chr2	+	11285	9	NIC	ENSMUSG00000026842.17	novel	6327	11	NA	NA	-34	-7	intron_retention	FALSE	canonical	3	69	junction_1	40.9542427594505	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACAGACTGCTTGGTCT	5545	False	NA	13	True	AATAAA	-14	NA	31578353	31693546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31687075_31687574
ES.18770.2	chr2	+	174	2	Genic_Genomic	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-5018	-44	multi-exon	TRUE	non_canonical	0	0	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31555708	31571317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_31555718_31571152
ES.18770.20	chr2	+	6720	12	NNC	ENSMUSG00000026842.17	novel	3268	12	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.6402888915506	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACAGACTGCTTGGTCTG	5594	False	NA	14	True	AATAAA	-15	NA	31578402	31693547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31579955_31580532_31580772_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.21	chr2	+	3618	11	NNC	ENSMUSG00000026842.17	novel	6327	11	NA	NA	33	2862	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	63.6006289277079	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTGACAGCTCAATG	5612	False	NA	NA	False	AATAAA	-11	NA	31578420	31697101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31696616
ES.18770.23	chr2	+	6711	13	NIC	ENSMUSG00000026842.17	novel	3268	12	NA	NA	-19	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.1735110050618	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGGTCTGTGATTCAT	5721	False	NA	22	True	AATAAA	-23	NA	31578529	31693555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31579955_31580566_31580772_31585760_31585905_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.24	chr2	+	6557	12	NIC	ENSMUSG00000026842.17	novel	3268	12	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	72.6402888915506	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	5725	False	NA	16	True	AATAAA	-17	NA	31578533	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31579955_31580566_31580772_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.25	chr2	+	2155	4	NNC	ENSMUSG00000026842.17	novel	2017	3	NA	NA	-3	-21	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.24721912892465	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAACAATAACAA	5737	False	NA	NA	False	NA	NA	NA	31578545	31597073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31579955_31585760_31585905_31586772_31586929_31596627
ES.18770.26	chr2	+	2302	4	NIC	ENSMUSG00000026842.17	novel	2017	3	NA	NA	1	81	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.471404520791032	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCAAAGCATTCATT	5741	False	NA	NA	False	AATAAA	-18	NA	31578549	31597175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31579955_31580566_31580772_31585760_31585905_31596627
ES.18770.27	chr2	+	6480	12	FSM	ENSMUSG00000026842.17	ENSMUST00000142554.8	3268	12	-14	-3198	1	-4	multi-exon	FALSE	canonical	0	0	junction_2	72.0707870576383	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	5741	False	NA	16	True	AATAAA	-17	NA	31578549	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31579955_31585760_31585905_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.28	chr2	+	6378	11	NNC	ENSMUSG00000026842.17	novel	6327	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.5012598300223	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGACTGCTTGGTCTGT	5741	False	NA	15	True	AATAAA	-16	NA	31578549	31693548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31579955_31668345_31668520_31668932_31669229_31674475_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.29	chr2	+	3629	2	ISM	ENSMUSG00000118600.2_ENSMUSG00000026842.17	ENSMUST00000135233.3	815	4	-1071	86244	3	3564	5prime_fragment	FALSE	canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTGTGTGTGTGTGGG	5743	False	NA	NA	False	AATAAA	-12	NA	31578551	31582792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31579955_31580566
ES.18770.3	chr2	+	1721	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	-22	-13	-22	13	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTGTTCCGTCTGCTG	NA	False	NA	NA	False	AATAAA	-29	NA	31560704	31571374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.30	chr2	+	5497	4	ISM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	-11	15411	3	-6440	5prime_fragment	FALSE	canonical	3	69	junction_1	61.2535713244542	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCCCGGCTGTTTTTGT	5743	False	NA	NA	False	NA	NA	NA	31578551	31678142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518
ES.18770.32	chr2	+	1940	2	NIC	ENSMUSG00000026842.17	novel	2017	3	NA	NA	0	82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCAAAGCATTCATTC	5755	False	NA	NA	False	AATAAA	-19	NA	31578563	31597176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31579955_31596627
ES.18770.33	chr2	+	2521	1	Intergenic	novelGene_15572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	1119	False	NA	NA	False	NA	NA	NA	31617716	31620237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31617700_31620200
ES.18770.34	chr2	+	176	1	Intergenic	novelGene_15576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	31638602	31638778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31638600_31638800
ES.18770.35	chr2	+	5128	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	-19	685	-19	1	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGGTCTGTGATTCA	NA	False	NA	21	True	AATAAA	-22	NA	31649935	31693554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.36	chr2	+	5192	12	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.1723478803431	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACAGACTGCTTGGTCTG	NA	False	NA	14	True	AATAAA	-15	NA	31649954	31693547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31688587_31688678_31690217
ES.18770.37	chr2	+	2852	3	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.5	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	NA	False	NA	17	True	AATAAA	-18	NA	31649957	31693550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668453_31690975
ES.18770.38	chr2	+	5788	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	9	-3	9	3	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCCTGATGTGTCATT	NA	False	NA	NA	False	CATAAA	-20	NA	31649963	31694242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.4	chr2	+	1621	10	NNC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	6	5481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	292.458459643902	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATCGCTC	NA	False	NA	NA	False	NA	NA	NA	31560736	31576842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501_31571270_31576805
ES.18770.41	chr2	+	7576	10	ISM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	10	686	10	0	intron_retention	FALSE	canonical	3	93	junction_1	31.7245085768786	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	NA	False	NA	20	True	AATAAA	-21	NA	31649964	31693553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574
ES.18770.42	chr2	+	5434	11	NIC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	56.9878057131523	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31649964	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31650468_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.43	chr2	+	5957	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	13	-176	13	176	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATAGTCGCTCCCTAGA	NA	False	NA	NA	False	AATAAA	-26	NA	31649967	31694415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.44	chr2	+	5268	12	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.0609391292384	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACAGACTGCTTGGTCT	NA	False	NA	13	True	AATAAA	-14	NA	31649979	31693546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31681811_31682004_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.46	chr2	+	3883	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	40	1871	40	-1185	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGCTCACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	31649994	31692368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.47	chr2	+	4856	11	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.2029411057998	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31649995	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682299_31684624_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.48	chr2	+	5045	11	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	47	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	60.6016501425498	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	NA	False	NA	17	True	AATAAA	-18	NA	31650001	31693550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690230
ES.18770.49	chr2	+	10540	10	NIC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	55	-4	intron_retention	FALSE	canonical	3	93	junction_1	31.6719293872525	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31650009	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.5	chr2	+	1902	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	11	-227	7	227	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTGGTTTCTGATGCT	NA	False	NA	NA	False	AATAAA	-11	NA	31560737	31571588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.50	chr2	+	4924	11	NNC	ENSMUSG00000026842.17	novel	5794	11	NA	NA	71	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.3397842935075	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31650025	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31650128_31668345_31668520_31669041_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.52	chr2	+	4930	10	ISM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	18390	692	-11838	-6	3prime_fragment	FALSE	canonical	3	170	junction_6	11.6809436452902	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACAGACTGCTTGGTCTG	NA	False	NA	14	True	AATAAA	-15	NA	31668344	31693547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.54	chr2	+	3742	4	ISM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	34598	689	-2105	-3	3prime_fragment	FALSE	canonical	3	174	junction_3	7.40870359029762	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGCTTGGTCTGTGA	4274	False	NA	17	True	AATAAA	-18	NA	31684552	31693550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31684707_31686984_31687075_31687574_31687740_31690217
ES.18770.55	chr2	+	3497	2	ISM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	37619	691	916	-5	3prime_fragment	FALSE	canonical	3	174	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAGACTGCTTGGTCTGT	7295	False	NA	15	True	AATAAA	-16	NA	31687573	31693548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31687740_31690217
ES.18770.56	chr2	+	4294	2	NNC	ENSMUSG00000026842.17	novel	6327	11	NA	NA	1792	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTGCTTGGTCTGTG	41	False	NA	16	True	AATAAA	-17	NA	31688449	31693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31689412_31690217
ES.18770.6	chr2	+	2444	8	NIC	ENSMUSG00000039356.16	novel	2076	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	21	junction_2	318.842101539752	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGGAGTCTCACCGC	NA	False	NA	NA	False	AATAAA	-14	NA	31560742	31571359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31560874_31562483_31562599_31564526_31564573_31564706_31564797_31565850_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.7	chr2	+	1700	10	NNC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-3	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	381.022147050811	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31560742	31571317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31564900_31564975_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.8	chr2	+	3567	8	NIC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-3	-44	intron_retention	FALSE	canonical	3	842	junction_5	48.6033508545009	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31560742	31571317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31560874_31562483_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18770.9	chr2	+	3745	7	NIC	ENSMUSG00000039356.16	novel	1686	9	NA	NA	-2	1	intron_retention	FALSE	canonical	3	842	junction_4	51.5086292662588	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGAGTCTCACCGCGTG	NA	False	NA	NA	False	AATAAA	-17	NA	31560743	31571362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31560874_31562483_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ES.18771.1	chr2	-	164	1	Intergenic	novelGene_15567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	31574599	31574435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31574400_31574600
ES.18772.1	chr2	-	169	1	Intergenic	novelGene_15568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	31589290	31589121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31589100_31589300
ES.18773.1	chr2	-	155	1	Intergenic	novelGene_15569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	31589481	31589326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31589300_31589500
ES.18774.1	chr2	-	265	1	Intergenic	novelGene_15570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAACAAAAGACCATT	NA	False	NA	NA	False	NA	NA	NA	31597395	31597130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31597100_31597400
ES.18775.1	chr2	-	192	1	Intergenic	novelGene_15571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	31614902	31614710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31614700_31614900
ES.18776.1	chr2	-	179	1	Intergenic	novelGene_15573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	31621866	31621687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31621700_31621900
ES.18777.1	chr2	-	159	1	Intergenic	novelGene_15574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31622534	31622375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31622400_31622500
ES.18778.1	chr2	-	176	1	Intergenic	novelGene_15575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAGAAAAA	5564	False	NA	NA	False	NA	NA	NA	31630342	31630166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31630200_31630300
ES.18779.1	chr2	-	7281	2	Antisense	novelGene_ENSMUSG00000026842.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGCTGACACAGGAAT	NA	False	NA	NA	False	NA	NA	NA	31672543	31664848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_31668514_31668927
ES.1878.1	chr1	+	178	1	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	2051	False	NA	NA	False	NA	NA	NA	171034907	171035085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171034900_171035100
ES.18780.1	chr2	+	159	1	Intergenic	novelGene_15577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31799132	31799291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31799100_31799300
ES.18781.1	chr2	+	1455	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	60	1602	60	502	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTCCATGTGTGCTA	NA	False	NA	15	True	NA	NA	NA	31840210	31861852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ES.18781.2	chr2	+	3023	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	93	1	-42	-1	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGTGTCTTTGTGTTTCT	NA	False	NA	3	True	AATAAA	-13	NA	31840243	31863453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ES.18781.3	chr2	+	999	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	116	2002	-19	102	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACTGATTCCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	31840266	31861452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ES.18781.4	chr2	+	2934	5	FSM	ENSMUSG00000001864.14	ENSMUST00000128271.8	519	5	-1	-2414	-1	-4	multi-exon	FALSE	canonical	0	0	junction_1	13.8270568090248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCAGTGTCTTTGTGTT	NA	False	NA	0	True	AATAAA	-10	NA	31850358	31863450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31850485_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ES.18782.12	chr2	+	6559	36	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	3	0	intron_retention	FALSE	canonical	1	8	junction_6	29.6936191867573	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCTGGGTATTTATT	NA	False	NA	28	True	ATTAAA	-22	NA	31864450	31942379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873176_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.14	chr2	+	4970	1	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	7	-544	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGATCCAAGAATTTAG	NA	False	NA	NA	False	NA	NA	NA	31864454	31869424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864500_31869400
ES.18782.15	chr2	+	6288	33	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	17	2	intron_retention	FALSE	canonical	0	0	junction_7	32.0129215854708	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31864464	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.17	chr2	+	6683	36	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_6	30.6394436993246	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31864467	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873039_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.2	chr2	+	4774	27	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	-21	20632	-21	17	intron_retention	FALSE	canonical	3	95	junction_11	15.0262098430882	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTTGTGAAAGAGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	31864426	31921751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718
ES.18782.20	chr2	+	6747	36	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_1	30.6567034983828	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31864468	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864781_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.21	chr2	+	6455	35	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	21	1	intron_retention	FALSE	canonical	2	4	junction_9	30.5973544099128	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATCTGGGTATTTAT	NA	False	NA	27	True	ATTAAA	-21	NA	31864468	31942378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.23	chr2	+	6578	36	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-19	1	intron_retention	FALSE	non_canonical	0	0	junction_21	30.2237101141012	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACATCTGGGTATTTAT	NA	False	NA	27	True	ATTAAA	-21	NA	31864478	31942378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907031_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.24	chr2	+	7222	35	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-9	344	intron_retention	FALSE	canonical	1	2	junction_32	28.5614737971822	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGCTGTTTTGTAATG	NA	False	NA	NA	False	NA	NA	NA	31864488	31943210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31941020_31941161_31941785_31941811_31942130
ES.18782.25	chr2	+	745	4	FSM	ENSMUSG00000001855.16	ENSMUST00000130975.2	738	4	-6	-1	-6	1	multi-exon	FALSE	canonical	3	137	junction_1	1.88561808316413	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGGAAGGCTTTTAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	31864491	31869969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701
ES.18782.26	chr2	+	7000	21	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	50	37044	0	3685	5prime_fragment	FALSE	canonical	3	95	junction_11	12.8199063959141	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAGCAGATTTGTGACA	NA	False	NA	NA	False	NA	NA	NA	31864497	31905339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196
ES.18782.27	chr2	+	2591	15	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	34.0507574311153	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	31864501	31888709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31888214
ES.18782.28	chr2	+	6373	35	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	2066	2	intron_retention	FALSE	non_canonical	0	0	junction_28	31.0853830290425	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31866563	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924987_31928126_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.3	chr2	+	6629	36	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-21	0	intron_retention	TRUE	canonical	3	95	junction_11	21.2761052136246	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31864426	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.30	chr2	+	6011	33	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_5	38.918070493506	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31869804	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879092_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901161_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.31	chr2	+	5650	29	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-6668	0	intron_retention	FALSE	canonical	3	95	junction_4	22.8984002649503	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31878164	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.32	chr2	+	2371	7	ISM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	20396	44127	11	-3398	internal_fragment	FALSE	canonical	3	113	junction_4	6.25610812637449	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTCCCCATGGGATTG	NA	False	NA	NA	False	AATAAA	-22	NA	31884843	31898256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700
ES.18782.33	chr2	+	4450	22	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	4627	-6	intron_retention	FALSE	canonical	3	98	junction_7	24.5678291937346	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCACAGAACATCTGGG	5313	False	NA	20	True	ATTAAA	-14	NA	31892599	31942371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.34	chr2	+	4272	21	NNC	ENSMUSG00000001855.16	novel	3569	8	NA	NA	5792	0	intron_retention	FALSE	canonical	0	0	junction_1	38.7316408121319	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCTGGGTATTTATT	6478	False	NA	28	True	ATTAAA	-22	NA	31893764	31942379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31893820_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.35	chr2	+	4295	20	NNC	ENSMUSG00000001855.16	novel	3569	8	NA	NA	-4670	0	intron_retention	FALSE	canonical	0	0	junction_1	39.723071855952	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	8324	False	NA	32	True	ATTAAA	-26	NA	31895610	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31895844_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.36	chr2	+	4327	19	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-3845	0	intron_retention	FALSE	canonical	3	98	junction_4	25.4214476377723	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	9149	False	NA	32	True	ATTAAA	-26	NA	31896435	31942383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.37	chr2	+	3937	18	NNC	ENSMUSG00000001855.16	novel	3569	8	NA	NA	105	2	intron_retention	FALSE	canonical	0	0	junction_1	41.2760141312186	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31900385	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31900550_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.38	chr2	+	2274	1	Intergenic	novelGene_15578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	31912600	31914874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31912600_31914900
ES.18782.39	chr2	+	220	1	Intergenic	novelGene_15579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGTATGATCCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	31919244	31919464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31919200_31919500
ES.18782.40	chr2	+	2796	9	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-2727	2	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	27.3758561509955	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31921260	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.41	chr2	+	180	1	Intergenic	novelGene_15581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	31931800	31931980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31931800_31932000
ES.18782.42	chr2	+	3780	4	NNC	ENSMUSG00000001855.16	novel	3569	8	NA	NA	1679	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.8833859149027	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACATCTGGGTATTTA	NA	False	NA	26	True	ATTAAA	-20	NA	31934208	31942377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31937587_31941020_31941161_31941785_31941811_31942140
ES.18782.43	chr2	+	3319	4	ISM	ENSMUSG00000001855.16	ENSMUST00000138012.2	3569	8	10695	1607	2153	1	3prime_fragment	FALSE	canonical	3	158	junction_2	12.7540843131393	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCTGGGTATTTATTT	NA	False	NA	29	True	ATTAAA	-23	NA	31934682	31942380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.44	chr2	+	2747	3	FSM	ENSMUSG00000001855.16	ENSMUST00000146138.3	915	3	-2317	485	-2317	2	multi-exon	FALSE	canonical	3	158	junction_1	13	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31938689	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31941161_31941785_31941811_31942130
ES.18782.45	chr2	+	3135	1	FSM	ENSMUSG00000099075.3	ENSMUST00000184964.3	63	1	-1711	-1361	-1711	1361	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGGGTATTTATTTG	NA	False	NA	30	True	ATTAAA	-24	NA	31939246	31942381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31939200_31942400
ES.18782.7	chr2	+	7436	36	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-1	344	intron_retention	FALSE	canonical	3	95	junction_11	21.2761052136246	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGCTGTTTTGTAATG	NA	False	NA	NA	False	NA	NA	NA	31864446	31943210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ES.18782.8	chr2	+	6456	34	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	-1	-6	intron_retention	FALSE	non_canonical	0	0	junction_33	36.2105109316118	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCACAGAACATCTGGG	NA	False	NA	20	True	ATTAAA	-14	NA	31864446	31942371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31942119
ES.18782.9	chr2	+	6635	29	NNC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	0	4249	intron_retention	FALSE	canonical	0	0	junction_21	27.9621418627225	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGAACATAATTGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	31864447	31925983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907041_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214
ES.18783.1	chr2	-	176	1	Intergenic	novelGene_15580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAATC	NA	False	NA	NA	False	NA	NA	NA	31930797	31930621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_31930600_31930800
ES.18784.1	chr2	+	179	1	Intergenic	novelGene_15582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	721	False	NA	NA	False	NA	NA	NA	31966404	31966583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31966400_31966600
ES.18785.1	chr2	+	171	1	Intergenic	novelGene_15583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAAGAG	5580	False	NA	NA	False	NA	NA	NA	31971263	31971434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31971300_31971400
ES.18786.1	chr2	-	4597	3	ISM	ENSMUSG00000050592.9	ENSMUST00000139629.2	3236	6	-200	16811	-12	1	5prime_fragment	FALSE	canonical	2	4	junction_2	3.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTCTGGTGGCAATT	NA	False	NA	NA	False	AATAAA	-36	NA	31974881	31956877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_31959786_31972595_31973621_31974217
ES.18786.3	chr2	-	3074	2	FSM	ENSMUSG00000050592.9	ENSMUST00000130178.2	525	2	4	-2553	4	0	multi-exon	TRUE	canonical	1	2	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	AATAAA	-35	NA	31969360	31956878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_31959786_31969193
ES.18786.4	chr2	-	3027	2	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGGCTCTGGTGGCAA	NA	False	NA	NA	False	AATAAA	-34	NA	31969371	31956879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31959786_31969250
ES.18786.5	chr2	-	3852	4	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.64279609239471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTTGGCTCTGGTGGC	NA	False	NA	NA	False	AATAAA	-32	NA	31974878	31956881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31958476_31958592_31959786_31972595_31973621_31974838
ES.18786.6	chr2	-	2973	2	NNC	ENSMUSG00000050592.9	novel	4107	2	NA	NA	4897	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCACCCTTGGCTCTGGT	NA	False	NA	NA	False	AATAAA	-29	NA	31964467	31956884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_31959786_31964395
ES.18787.1	chr2	+	1934	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	2	11	2	1	multi-exon	FALSE	canonical	2	5	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCATCCTTGTCCTG	NA	False	NA	NA	False	AATACA	-11	NA	31985541	32000821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_31986275_31999620
ES.18787.2	chr2	+	2321	1	Intergenic	novelGene_15584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31989914	31992235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31989900_31992200
ES.18787.3	chr2	+	5991	1	NIC	ENSMUSG00000051373.6	novel	1947	2	NA	NA	8668	5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTTGTCCTGTGTG	3473	False	NA	NA	False	AATACA	-15	NA	31994834	32000825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_31994800_32000800
ES.18787.4	chr2	+	176	1	Intergenic	novelGene_15585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAATAAGGTAG	7442	False	NA	NA	False	NA	NA	NA	31998803	31998979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_31998800_31999000
ES.18788.1	chr2	-	174	1	Intergenic	novelGene_15586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	32026730	32026556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32026600_32026700
ES.18789.1	chr2	-	178	1	Intergenic	novelGene_15587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATCCCATACCA	NA	False	NA	NA	False	NA	NA	NA	32033158	32032980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32033000_32033200
ES.1879.1	chr1	+	178	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	2598	False	NA	NA	False	NA	NA	NA	171035454	171035632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171035500_171035600
ES.18790.1	chr2	+	172	1	Intergenic	novelGene_15588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATAAAAACAAGGGC	NA	False	NA	NA	False	NA	NA	NA	32034185	32034357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32034200_32034400
ES.18791.1	chr2	+	6885	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-921	-1669	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	129.750170198989	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTCTGAATTACTC	5729	False	NA	13	True	AGTAAA	-19	NA	32040172	32122865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32040263_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114180_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.10	chr2	+	8783	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-91	1	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCGGTTTTCTATCA	6559	False	NA	25	True	AATAAA	-41	NA	32041002	32124550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.100	chr2	+	5211	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	12031	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	122.532938618044	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATATGGTCCTCGCTG	1133	False	NA	NA	False	NA	NA	NA	32053190	32121171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111355_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.101	chr2	+	3238	9	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	12052	1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	208.80190223032	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	1154	False	NA	11	True	AATAAA	-13	NA	32053211	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072578_32111471_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.102	chr2	+	6837	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	12184	-1668	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	115.664841484159	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTGAATTACTCT	1286	False	NA	14	True	AGTAAA	-20	NA	32053343	32122866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.103	chr2	+	6876	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	12434	1598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.35763200604	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	1536	False	NA	-8	True	NA	NA	NA	32053593	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053769_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089101_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.104	chr2	+	6886	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	12441	-1669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.054089538875	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTCTGAATTACTC	1543	False	NA	13	True	AGTAAA	-19	NA	32053600	32122865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053769_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.107	chr2	+	8576	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-11330	-3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	99.0866494052989	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACATGCTTTCTCAGG	4296	False	NA	6	True	AATAAA	-22	NA	32061907	32124531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32062103_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.108	chr2	+	8535	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-8307	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.474535296787	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	1593	False	NA	-22	True	NA	NA	NA	32064930	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32065031_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.109	chr2	+	8521	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-7382	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.406285244142	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	2518	False	NA	23	True	AATAAA	-39	NA	32065855	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32065979_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.11	chr2	+	7007	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-81	-1668	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTGAATTACTCT	6569	False	NA	14	True	AGTAAA	-20	NA	32041012	32122866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.110	chr2	+	4186	6	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	-1979	35213	-1979	-23207	intron_retention	FALSE	canonical	3	394	junction_2	32.8182875848208	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAATAACAAAGAAAAAAA	7921	False	NA	NA	False	ATTAAA	-20	NA	32071258	32085961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391
ES.18791.111	chr2	+	6749	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-768	-1670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	130.679892274774	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAATGTCTGAATTACT	9132	False	NA	12	True	AGTAAA	-18	NA	32072469	32122864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109550_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113478_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.112	chr2	+	4434	7	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-432	-23207	intron_retention	FALSE	non_canonical	0	0	junction_1	213.150507597071	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAATAACAAAGAAAAAAA	9468	False	NA	NA	False	ATTAAA	-20	NA	32072805	32085961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32072952_32073134_32073313_32075356_32075684_32075738_32077566_32081520_32081665_32083774_32084017_32084391
ES.18791.113	chr2	+	8322	28	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-198	-3	combination_of_known_junctions	FALSE	canonical	3	283	junction_27	61.2097072194233	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	9702	False	NA	21	True	AATAAA	-37	NA	32073039	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.114	chr2	+	10386	29	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-196	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	135.620625576026	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	9704	False	NA	23	True	AATAAA	-39	NA	32073041	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.115	chr2	+	7948	26	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	4253	-3	combination_of_known_junctions	FALSE	canonical	3	283	junction_25	62.5672885779782	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	NA	False	NA	21	True	AATAAA	-37	NA	32077490	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.116	chr2	+	8107	27	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	4278	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	129.157471200329	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTCTCAGGCTGTGT	NA	False	NA	12	True	AATAAA	-28	NA	32077515	32124537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.118	chr2	+	6201	26	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	8282	1617	combination_of_known_junctions	FALSE	canonical	3	239	junction_24	77.7346666552318	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	NA	False	NA	11	True	AATAAA	-13	NA	32081519	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.12	chr2	+	6911	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-77	-1670	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	98.1481565903952	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAATGTCTGAATTACT	6573	False	NA	12	True	AGTAAA	-18	NA	32041016	32122864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.120	chr2	+	5811	24	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	10613	1617	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	109.523456499644	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	566	False	NA	11	True	AATAAA	-13	NA	32083850	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098738_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.121	chr2	+	7433	24	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	11194	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	155.655392242657	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACATGCTTTCTCAGG	549	False	NA	6	True	AATAAA	-22	NA	32084431	32124531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098645_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.122	chr2	+	5613	22	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	43774	1759	-11527	1616	3prime_fragment	FALSE	canonical	3	120	junction_11	96.6434877206988	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAATTTATTTATATGTA	985	False	NA	10	True	AATAAA	-12	NA	32084867	32122790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.123	chr2	+	5611	23	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-11428	1625	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	136.923517288948	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATGTATTGATGTTG	1084	False	NA	19	True	AATAAA	-21	NA	32084966	32122799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098645_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.124	chr2	+	5476	21	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-7386	1619	combination_of_known_junctions	FALSE	canonical	3	283	junction_20	68.7946945628804	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTATATGTATTG	3511	False	NA	13	True	AATAAA	-15	NA	32089008	32122793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.126	chr2	+	7283	22	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-5474	-31	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	148.157864571771	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	5423	False	NA	-22	True	NA	NA	NA	32090920	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.128	chr2	+	6629	18	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-49	-1	combination_of_known_junctions	FALSE	canonical	3	283	junction_17	65.9569955312973	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	636	False	NA	23	True	AATAAA	-39	NA	32096345	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.13	chr2	+	6983	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-56	1617	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	105.787186789747	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	6594	False	NA	11	True	AATAAA	-13	NA	32041037	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098657_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.130	chr2	+	4760	16	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1673	1619	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	151.975963011699	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTATATGTATTG	8707	False	NA	13	True	AATAAA	-15	NA	32104416	32122793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.131	chr2	+	4223	15	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-35	1625	combination_of_known_junctions	FALSE	canonical	3	283	junction_14	64.2799997460092	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATGTATTGATGTTG	NA	False	NA	19	True	AATAAA	-21	NA	32106054	32122799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.132	chr2	+	4452	16	ISM	ENSMUSG00000039262.17	ENSMUST00000069817.15	10671	32	65036	1447	106	-1447	3prime_fragment	FALSE	canonical	3	239	junction_14	90.2348540691948	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTTGTGTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	32106195	32123087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.133	chr2	+	5498	12	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-855	-1	combination_of_known_junctions	FALSE	canonical	3	283	junction_11	70.7471343928034	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	NA	False	NA	23	True	AATAAA	-39	NA	32108686	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.135	chr2	+	5314	11	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	36308	-3376	4	1	3prime_fragment	FALSE	canonical	3	239	junction_9	107.170938224875	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCGGTTTTCTATCA	NA	False	NA	25	True	AATAAA	-41	NA	32109545	32124550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.138	chr2	+	5044	7	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	38743	-3374	2201	-1	3prime_fragment	FALSE	canonical	3	239	junction_5	131.695882834489	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	NA	False	NA	23	True	AATAAA	-39	NA	32111980	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.139	chr2	+	1770	3	ISM	ENSMUSG00000039262.17	ENSMUST00000132459.8	4837	29	40858	2690	4316	-2690	internal_fragment	FALSE	canonical	3	486	junction_1	13.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAGAATGGCC	NA	False	NA	NA	False	NA	NA	NA	32114095	32118484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32114182_32116242_32116399_32116956
ES.18791.140	chr2	+	4881	1	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	9889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	899	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	NA	False	NA	24	True	AATAAA	-40	NA	32119668	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32119700_32124500
ES.18791.15	chr2	+	8709	30	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	115.303714130426	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6603	False	NA	24	True	AATAAA	-40	NA	32041046	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084564_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.16	chr2	+	6785	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-43	1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.2019265045907	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	6607	False	NA	11	True	AATAAA	-13	NA	32041050	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041105_32041213_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.18	chr2	+	8410	29	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	101.583200794587	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACATGCTTTCTCAGG	6614	False	NA	6	True	AATAAA	-22	NA	32041057	32124531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.2	chr2	+	9511	30	FSM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	-896	-3	-896	3	multi-exon	FALSE	canonical	3	120	junction_19	84.1956133534682	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGTTTTCTATCATC	5754	False	NA	27	True	AATAAA	-43	NA	32040197	32124552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.21	chr2	+	8677	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	105.509035947954	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6622	False	NA	23	True	AATAAA	-39	NA	32041065	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081561_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.22	chr2	+	5552	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-20	298	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTGCTGTCATTGG	6630	False	NA	NA	False	NA	NA	NA	32041073	32121472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.23	chr2	+	2354	9	ISM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	-20	38588	-20	-23207	5prime_fragment	FALSE	canonical	3	374	junction_1	33.800656428537	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAATAACAAAGAAAAAAA	6630	False	NA	NA	False	ATTAAA	-20	NA	32041073	32085961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868
ES.18791.25	chr2	+	9265	33	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-13	1598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	175.351789269457	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	6637	False	NA	-8	True	NA	NA	NA	32041080	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32091210_32093359_32094020_32094337_32096347_32096593_32098657_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.27	chr2	+	5894	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-12	566	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATGTATGGCACATTCA	6638	False	NA	NA	False	AATATA	-44	NA	32041081	32121740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.28	chr2	+	5353	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-12	25	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGCTGTCCCCAGTG	6638	False	NA	NA	False	NA	NA	NA	32041081	32121199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.29	chr2	+	7146	32	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-12	1622	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	133.845252096759	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATATGTATTGATG	6638	False	NA	16	True	AATAAA	-18	NA	32041081	32122796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.3	chr2	+	8813	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-667	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	100.259188482396	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCGGTTTTCTATCA	5983	False	NA	25	True	AATAAA	-41	NA	32040426	32124550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32040840_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.31	chr2	+	10673	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	131.141382569432	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTCTCAGGCTGTGT	6638	False	NA	12	True	AATAAA	-28	NA	32041081	32124537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.32	chr2	+	8756	32	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-11	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	125.042927072354	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGTATAAAAAAA	6639	False	NA	-18	True	TTTAAA	-2	NA	32041082	32124507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32119554_32119651_32120622
ES.18791.33	chr2	+	6928	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-11	-1669	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	104.328865719044	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTCTGAATTACTC	6639	False	NA	13	True	AGTAAA	-19	NA	32041082	32122865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.34	chr2	+	7025	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-11	-1668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.803584001454	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTGAATTACTCT	6639	False	NA	14	True	AGTAAA	-20	NA	32041082	32122866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075350_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.35	chr2	+	5023	29	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-10	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	101.65660985165	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACATCTGTATAGCTGAA	6640	False	NA	NA	False	AAAAAG	-43	NA	32041083	32121151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.37	chr2	+	8528	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	98.1481565903952	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6641	False	NA	24	True	AATAAA	-40	NA	32041084	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.38	chr2	+	6645	29	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-7	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	127.717057136756	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTATTTATATGTATT	6643	False	NA	12	True	AATAAA	-14	NA	32041086	32122792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098648_32098848_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.4	chr2	+	7105	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	-651	-1679	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	114.928608352472	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTTTATATAATGTC	5999	False	NA	3	True	AGTAAA	-9	NA	32040442	32122855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32040840_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.41	chr2	+	8184	32	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	105.069007599579	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6647	False	NA	23	True	AATAAA	-39	NA	32041090	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622_32122662_32123170
ES.18791.42	chr2	+	6704	29	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1	1625	combination_of_known_splicesites	FALSE	canonical	2	5	junction_27	99.8764287527751	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATGTATTGATGTTG	6649	False	NA	19	True	AATAAA	-21	NA	32041092	32122799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116956_32117049_32120622
ES.18791.43	chr2	+	3783	13	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-1	1620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	123.054414341335	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTATATGTATTGA	6649	False	NA	14	True	AATAAA	-16	NA	32041092	32122794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32090945_32117017_32117049_32120622
ES.18791.44	chr2	+	8605	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	104.328865719044	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGTTTTCTATCATC	6649	False	NA	27	True	AATAAA	-43	NA	32041092	32124552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.45	chr2	+	6915	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1	1624	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	105.754243413681	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATATGTATTGATGTT	6649	False	NA	18	True	AATAAA	-20	NA	32041092	32122798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072613_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.46	chr2	+	6545	25	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	0	-9	intron_retention	FALSE	canonical	3	11	junction_15	123.71233994859	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATGGCCACGTGTTT	6650	False	NA	NA	False	NA	NA	NA	32041093	32112322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301
ES.18791.49	chr2	+	8407	29	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	101.65660985165	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6654	False	NA	24	True	AATAAA	-40	NA	32041097	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.50	chr2	+	10610	32	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	6	-31	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	141.121028344464	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	6656	False	NA	-22	True	NA	NA	NA	32041099	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.51	chr2	+	8524	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	139.321147792509	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6659	False	NA	21	True	AATAAA	-37	NA	32041102	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083933_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109550_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.53	chr2	+	9145	30	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	114.616882380023	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTCTCAGGCTGTGT	6660	False	NA	12	True	AATAAA	-28	NA	32041103	32124537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32115687_32116399_32116956_32117049_32120622
ES.18791.54	chr2	+	8033	26	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	13	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.083399471184	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	6663	False	NA	-22	True	NA	NA	NA	32041106	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098648_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.55	chr2	+	8552	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	99.6551246867801	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6665	False	NA	23	True	AATAAA	-39	NA	32041108	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081561_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.56	chr2	+	8232	28	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	18	1598	intron_retention	FALSE	canonical	3	8	junction_14	102.348204707551	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	6668	False	NA	-8	True	NA	NA	NA	32041111	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.59	chr2	+	10466	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	21	-3	intron_retention	FALSE	canonical	0	0	junction_21	142.991223132696	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6671	False	NA	21	True	AATAAA	-37	NA	32041114	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110147_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.6	chr2	+	7190	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-182	-1668	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTGAATTACTCT	6468	False	NA	14	True	AGTAAA	-20	NA	32040911	32122866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.60	chr2	+	6754	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	23	1543	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTTTTCAGTCCTTT	6673	False	NA	-63	True	AAGAAA	-11	NA	32041116	32122717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.62	chr2	+	8598	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	100.37460157875	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTGTCGGTTTTCTA	6679	False	NA	22	True	AATAAA	-38	NA	32041122	32124547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109531_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.63	chr2	+	8974	32	FSM	ENSMUSG00000039262.17	ENSMUST00000069817.15	10671	32	-37	1734	29	1626	multi-exon	FALSE	canonical	3	11	junction_16	123.67091540608	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATGTATTGATGTTGT	6679	False	NA	20	True	AATAAA	-22	NA	32041122	32122800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.64	chr2	+	8862	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	31	1598	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	120.179629444151	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	6681	False	NA	-8	True	NA	NA	NA	32041124	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.65	chr2	+	8563	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	100.888301923081	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6681	False	NA	23	True	AATAAA	-39	NA	32041124	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084882_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.66	chr2	+	6751	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	31	1622	combination_of_known_splicesites	FALSE	canonical	2	5	junction_27	105.698312071631	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATATGTATTGATG	6681	False	NA	16	True	AATAAA	-18	NA	32041124	32122796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116956_32117049_32119274_32119357_32120622
ES.18791.67	chr2	+	8572	29	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-31	-31	intron_retention	FALSE	canonical	3	19	junction_16	99.3481817875385	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	6685	False	NA	-22	True	NA	NA	NA	32041128	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.68	chr2	+	8647	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	105.787186789747	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	6687	False	NA	23	True	AATAAA	-39	NA	32041130	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098657_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.7	chr2	+	7146	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-94	1625	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	120.514286843234	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATGTATTGATGTTG	6556	False	NA	19	True	AATAAA	-21	NA	32040999	32122799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.70	chr2	+	9056	28	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	120	junction_19	86.236109992663	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6689	False	NA	21	True	AATAAA	-37	NA	32041132	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.71	chr2	+	6896	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-26	1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	106.08579337289	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	6690	False	NA	11	True	AATAAA	-13	NA	32041133	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114179_32116236_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.72	chr2	+	8448	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-25	-31	combination_of_known_splicesites	FALSE	canonical	2	5	junction_27	105.698312071631	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	6691	False	NA	-22	True	NA	NA	NA	32041134	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116956_32117049_32119274_32119357_32120622
ES.18791.73	chr2	+	5093	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-25	-13	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.981010263419	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCTGAACTTTTATATG	6691	False	NA	NA	False	NA	NA	NA	32041134	32121161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.74	chr2	+	5194	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGTCCTCGCTGTCCTC	6692	False	NA	NA	False	NA	NA	NA	32041135	32121176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.75	chr2	+	6789	30	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	-24	1620	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	114.347728843024	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTATATGTATTGA	6692	False	NA	14	True	AATAAA	-16	NA	32041135	32122794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072613_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.79	chr2	+	7019	30	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-17	1618	intron_retention	FALSE	canonical	3	239	junction_28	73.8597990571715	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTATTTATATGTATT	6699	False	NA	12	True	AATAAA	-14	NA	32041142	32122792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.80	chr2	+	6818	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-17	1614	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	106.375023175347	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAGAATTTATTTATATG	6699	False	NA	8	True	AATAAA	-10	NA	32041142	32122788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32090968_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.81	chr2	+	5003	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-15	-202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	119.250828089368	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTCTGCCCAGTGAC	6701	False	NA	NA	False	NA	NA	NA	32041144	32120972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32090968_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.82	chr2	+	8300	29	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	146.895058335076	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGGCTGTGTCGGTTTT	6701	False	NA	19	True	AATAAA	-35	NA	32041144	32124544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120616
ES.18791.83	chr2	+	8345	29	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-15	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	128.671642492169	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	6701	False	NA	-22	True	NA	NA	NA	32041144	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109549_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.84	chr2	+	8557	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	140.39176930607	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6701	False	NA	24	True	AATAAA	-40	NA	32041144	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077563_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120612
ES.18791.85	chr2	+	10685	32	FSM	ENSMUSG00000039262.17	ENSMUST00000069817.15	10671	32	-11	-3	-11	3	multi-exon	FALSE	canonical	3	11	junction_16	123.67091540608	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTCTCAGGCTGTGT	6705	False	NA	12	True	AATAAA	-28	NA	32041148	32124537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.86	chr2	+	10884	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	8	junction_16	125.136352298869	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6708	False	NA	21	True	AATAAA	-37	NA	32041151	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.89	chr2	+	6780	31	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-1	1598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.79723259003	865	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	6715	False	NA	-8	True	NA	NA	NA	32041158	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072570_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.9	chr2	+	8738	30	NNC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_28	140.717796374194	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6558	False	NA	24	True	AATAAA	-40	NA	32041001	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32103092_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116956_32117049_32120622
ES.18791.91	chr2	+	8647	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	125.382819267313	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	6905	False	NA	21	True	AATAAA	-37	NA	32041348	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32041606_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098657_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.92	chr2	+	6853	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	1104	1625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.406285244142	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATGTATTGATGTTG	7820	False	NA	19	True	AATAAA	-21	NA	32042263	32122799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32042468_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.93	chr2	+	6837	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	1438	1598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.474535296787	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGAAACACT	8154	False	NA	-8	True	NA	NA	NA	32042597	32122772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32042735_32072473_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.94	chr2	+	6747	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	1465	1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.406285244142	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	8181	False	NA	11	True	AATAAA	-13	NA	32042624	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32042735_32072473_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.95	chr2	+	8675	31	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	2735	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	106.34286791109	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	9451	False	NA	24	True	AATAAA	-40	NA	32043894	32124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32044089_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ES.18791.96	chr2	+	8467	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	11865	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.406285244142	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAGTATAAA	967	False	NA	-22	True	NA	NA	NA	32053024	32124503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053139_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.97	chr2	+	6970	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	11891	1617	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	95.6164802535426	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTATTTATATGTAT	993	False	NA	11	True	AATAAA	-13	NA	32053050	32122791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.98	chr2	+	8722	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	11896	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	95.6164802535426	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	998	False	NA	23	True	AATAAA	-39	NA	32053055	32124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18791.99	chr2	+	8694	30	NNC	ENSMUSG00000039262.17	novel	4837	29	NA	NA	11896	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	122.749844707613	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTCGGTTTTCT	998	False	NA	21	True	AATAAA	-37	NA	32053055	32124546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32053380_32072469_32072613_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ES.18792.1	chr2	-	176	1	Intergenic	novelGene_15589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	9359	False	NA	NA	False	NA	NA	NA	32056088	32055912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32055900_32056100
ES.18793.1	chr2	-	176	1	Intergenic	novelGene_15590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAATTAAAAATAAA	3679	False	NA	NA	False	NA	NA	NA	32061768	32061592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32061600_32061800
ES.18794.1	chr2	-	2448	5	Antisense	novelGene_ENSMUSG00000039262.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAACCAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	32091136	32080488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_32081664_32083772_32084513_32084865_32085005_32089008_32089103_32090836
ES.18794.2	chr2	-	1942	2	Antisense	novelGene_ENSMUSG00000039262.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCACGGGAGGCCTGCT	2990	False	NA	NA	False	NA	NA	NA	32084469	32082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_32084017_32084391
ES.18795.1	chr2	-	2596	1	Antisense	novelGene_ENSMUSG00000039262.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32097380	32094784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_32094800_32097400
ES.18796.1	chr2	-	1062	2	FSM	ENSMUSG00000086216.2	ENSMUST00000128298.2	951	2	-110	-1	-110	1	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTCTTGTTTTTATTT	NA	False	NA	NA	False	AATAAA	-5	NA	32126504	32122792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32123532_32126181
ES.18796.2	chr2	-	99	1	Intergenic	novelGene_15591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTCACGTGCTCGGA	NA	False	NA	-8	True	AATAAA	-18	NA	32126555	32126456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32126500_32126600
ES.18797.1	chr2	+	2925	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	-9	2	-9	2	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126592	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.11	chr2	+	2909	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	34.216031945643	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126684	32145016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126829_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.12	chr2	+	5226	17	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	126	junction_13	18.3132465718124	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126684	32145017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143906_32144284
ES.18797.13	chr2	+	2956	21	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.5073190353786	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126684	32145013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126829_32127164_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.14	chr2	+	2909	21	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.623264017855	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126684	32145017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127164_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131640_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.15	chr2	+	2864	20	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	38.7627201890462	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126684	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140450_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.16	chr2	+	6949	15	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	42.1338973526358	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGTTTTATGTTATT	NA	False	NA	11	True	AATAAA	-12	NA	32126684	32145011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32133017_32133476_32133543_32133630_32133725_32134245_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140450_32140575_32140800_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.17	chr2	+	3546	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	126	junction_15	17.7927020689265	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126684	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143906_32144284
ES.18797.18	chr2	+	2826	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	37.8948830406537	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTATGTTATTTAT	NA	False	NA	14	True	AATAAA	-15	NA	32126684	32145014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143900_32144284
ES.18797.19	chr2	+	3598	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	50.5579944551215	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126687	32145013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132006_32132064_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143906_32144284
ES.18797.2	chr2	+	2917	21	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.2202239729348	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126650	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127164_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.20	chr2	+	3789	19	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_5	51.6783738229799	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126687	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132006_32132064_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.21	chr2	+	2885	21	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.5172697147167	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTATGTTATTTAT	NA	False	NA	14	True	AATAAA	-15	NA	32126688	32145014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132006_32132064_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.22	chr2	+	2784	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	57.656015006953	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126690	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127164_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.23	chr2	+	2754	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	39.6109163155566	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126695	32145013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.24	chr2	+	2724	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTATGTTAT	NA	False	NA	10	True	AATAAA	-11	NA	32126695	32145010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.25	chr2	+	3343	19	FSM	ENSMUSG00000039254.17	ENSMUST00000129163.8	3340	19	1	-4	1	0	multi-exon	FALSE	canonical	3	126	junction_14	17.7705714561053	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126697	32145017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.27	chr2	+	2606	18	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	24	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	52.0225530011864	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126720	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.28	chr2	+	3124	19	NIC	ENSMUSG00000039254.17	novel	805	8	NA	NA	61	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	50.4341949939855	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTTATTTATTG	NA	False	NA	16	True	AATAAA	-17	NA	32126757	32145016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.29	chr2	+	3904	18	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-26	2	intron_retention	FALSE	canonical	3	126	junction_13	17.1193651856563	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32127324	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32127524_32130438_32130546_32130676_32130728_32131664_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.30	chr2	+	1504	5	ISM	ENSMUSG00000039254.17	ENSMUST00000123740.3	750	7	3338	-1046	3338	761	3prime_fragment	FALSE	canonical	3	128	junction_2	23.0908531674341	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGGCCCATGTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	32130688	32134770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630
ES.18797.31	chr2	+	3881	12	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	-1437	1	intron_retention	FALSE	canonical	0	0	junction_10	46.0732438802923	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTATGTTATTTAT	NA	False	NA	14	True	AATAAA	-15	NA	32132933	32145014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32142040_32142887_32143906_32144284
ES.18797.32	chr2	+	3668	11	NNC	ENSMUSG00000039254.17	novel	3340	19	NA	NA	-569	2	intron_retention	FALSE	canonical	0	0	junction_6	48.3648632790376	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32133801	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141241_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.33	chr2	+	2409	9	NIC	ENSMUSG00000039254.17	novel	3340	19	NA	NA	614	2	intron_retention	FALSE	canonical	3	126	junction_5	16.034630491533	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32135915	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.34	chr2	+	1353	3	ISM	ENSMUSG00000039254.17	ENSMUST00000129163.8	3340	19	15874	-2	1286	2	3prime_fragment	FALSE	canonical	3	162	junction_1	10	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32142570	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32143015_32143727_32143906_32144284
ES.18797.4	chr2	+	3316	20	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	37.3366803670469	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126664	32145017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.5	chr2	+	2776	19	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.3251717835087	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126665	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135971_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.6	chr2	+	2706	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	39.0825337515935	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTATGTTATTTAT	NA	False	NA	14	True	AATAAA	-15	NA	32126683	32145014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32143727_32143906_32144284
ES.18797.7	chr2	+	3169	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_14	17.2094038318273	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126683	32145013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.8	chr2	+	6490	16	NIC	ENSMUSG00000039254.17	novel	3340	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_11	17.7049898804452	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTTATGTTATTTA	NA	False	NA	13	True	AATAAA	-14	NA	32126683	32145013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32127524_32130438_32130546_32130676_32130728_32131664_32133017_32133476_32133543_32133630_32134402_32135558_32135690_32136026_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18797.9	chr2	+	2703	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	38.9115806812202	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATGTTATTTATT	NA	False	NA	15	True	AATAAA	-16	NA	32126683	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ES.18798.1	chr2	-	1989	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	14	2	14	-2	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTTGTCCTGTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	32150157	32145015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ES.18798.2	chr2	-	3732	5	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	158	junction_1	12.3592070943083	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACAATTTGTCCTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	32150073	32145017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ES.18798.3	chr2	-	2754	7	NNC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-5	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.0249068931394	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAACATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	32150078	32145035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32149266_32149313_32149752_32149920
ES.18798.4	chr2	-	4583	5	NNC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-5	-22	intron_retention	FALSE	non_canonical	0	0	junction_3	77.1621668954417	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAACATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	32150078	32145035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32148197_32148288_32148432_32148582_32149266_32149313_32149752_32149920
ES.18798.5	chr2	-	1913	7	NNC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-34	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.140745266067	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAACATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	32150107	32145035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148424_32148580_32148680_32149591_32149752_32149920
ES.18798.6	chr2	-	3333	6	NIC	ENSMUSG00000002550.17	novel	2005	7	NA	NA	-25	-22	intron_retention	FALSE	canonical	3	136	junction_1	18.9567929777165	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAACATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	32150098	32145035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32146224_32146629_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ES.18798.7	chr2	-	3873	4	FSM	ENSMUSG00000002550.17	ENSMUST00000134351.2	793	4	-8	-3072	-8	-22	multi-exon	FALSE	canonical	3	158	junction_1	14.0791413879619	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAACATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	32150081	32145035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32148197_32148288_32148680_32149591_32149752_32149920
ES.18799.1	chr2	+	422	1	FSM	ENSMUSG00000066068.6	ENSMUST00000118269.2	318	1	-35	-69	-35	69	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACTGTCTAAGACCAG	NA	False	NA	NA	False	NA	NA	NA	32161821	32162243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32161800_32162200
ES.188.1	chr1	+	3192	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23937997	23941189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_23938000_23941200
ES.1880.1	chr1	+	1793	4	NIC	ENSMUSG00000005677.15	novel	2855	6	NA	NA	12	-641	intron_retention	FALSE	canonical	1	1	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTTGTTCATTCTTTT	8745	False	NA	NA	False	ACTAAA	-12	NA	171041601	171045646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171041743_171041911_171042055_171043947_171044455_171044644
ES.18800.1	chr2	+	6151	23	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	16	2	intron_retention	FALSE	canonical	0	0	junction_1	31.4497171806648	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTAGGGTGTTCGT	NA	False	NA	24	True	AATAAA	-17	NA	32177411	32197927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32177483_32178076_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.11	chr2	+	4780	24	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	80	junction_6	19.8688516663808	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTGGGCCTAGGGT	NA	False	NA	18	True	AATAAA	-11	NA	32178261	32197921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.12	chr2	+	5642	23	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	94	junction_1	16.4088390814219	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTGGGCCTAGGGTG	NA	False	NA	19	True	AATAAA	-12	NA	32178262	32197922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.13	chr2	+	4515	24	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-2	0	intron_retention	FALSE	canonical	3	80	junction_7	19.9749370372182	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178262	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.15	chr2	+	4880	24	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	80	junction_5	19.0683776073023	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178262	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.16	chr2	+	4682	22	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-2	0	intron_retention	FALSE	canonical	2	9	junction_6	30.5177543953243	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178262	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.17	chr2	+	5888	21	NNC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_14	32.3961417455845	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178265	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187590_32187765_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194157_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32196096_32196171_32196329_32196417
ES.18800.19	chr2	+	4416	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	13	0	intron_retention	FALSE	canonical	3	80	junction_7	19.17314202211	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178277	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196329_32196417
ES.18800.2	chr2	+	4613	27	NIC	ENSMUSG00000002546.18	novel	4442	27	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.8164301447118	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCTAGGGTGTTCG	NA	False	NA	23	True	AATAAA	-16	NA	32177411	32197926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32177483_32178076_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.20	chr2	+	4091	26	NNC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	38.9043133855361	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178295	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193249_32193597_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196235_32196555
ES.18800.21	chr2	+	5409	23	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-28	0	intron_retention	FALSE	canonical	3	94	junction_1	16.6343764337243	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTGGGCCTAGGGTG	NA	False	NA	19	True	AATAAA	-12	NA	32178296	32197922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.24	chr2	+	4309	26	NNC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.4261037992303	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178296	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189055_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.25	chr2	+	4400	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-28	0	intron_retention	FALSE	canonical	3	80	junction_7	19.471489128695	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178296	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.27	chr2	+	5037	22	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-15	0	intron_retention	FALSE	canonical	3	80	junction_7	20.6987900442768	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178309	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189323_32191696_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.28	chr2	+	4639	22	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	2	-1166	intron_retention	FALSE	canonical	3	94	junction_1	15.7174599968581	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGCTCAGTTGGTAGA	NA	False	NA	NA	False	NA	NA	NA	32178346	32196756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.29	chr2	+	5688	22	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	3	0	intron_retention	FALSE	canonical	3	94	junction_1	16.534441481406	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178347	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.3	chr2	+	4326	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178210	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.30	chr2	+	5484	23	NNC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_5	31.4497171806648	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGGCCTAGGGTGT	NA	False	NA	20	True	AATAAA	-13	NA	32178348	32197923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187213_32187532_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.33	chr2	+	3019	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-4	-1161	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGTTGGTAGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	32178353	32196761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.34	chr2	+	4309	26	NNC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.4261037992303	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178353	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187230_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.35	chr2	+	6122	18	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-4	0	intron_retention	FALSE	canonical	3	94	junction_1	16.1180764219324	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178353	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32188961_32189043_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988
ES.18800.36	chr2	+	4222	25	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	30.5831914165645	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTGGGCCTAGGGTG	NA	False	NA	19	True	AATAAA	-12	NA	32178353	32197922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.37	chr2	+	4244	26	NNC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.4104186536888	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTAGGGTGTTCGT	NA	False	NA	24	True	AATAAA	-17	NA	32178365	32197927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32178409_32182104_32182228_32186647_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.38	chr2	+	4956	17	NNC	ENSMUSG00000002546.18	novel	4164	25	NA	NA	762	0	intron_retention	FALSE	canonical	3	15	junction_12	32.7471372794631	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	4817	False	NA	22	True	AATAAA	-15	NA	32187853	32197925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194892_32194970_32195047_32195224_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.4	chr2	+	5460	23	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-44	0	intron_retention	FALSE	canonical	3	94	junction_1	16.9924630837584	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178220	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32194268_32194645_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.5	chr2	+	5176	21	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-43	0	intron_retention	FALSE	canonical	3	80	junction_4	20.1972151545702	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178221	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187847_32188611_32188651_32188897_32188961_32189043_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.6	chr2	+	5551	23	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-11	0	intron_retention	FALSE	canonical	3	94	junction_1	15.4641681272472	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178253	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.8	chr2	+	4235	24	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	30.2323703880735	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTAGGGTGTT	NA	False	NA	21	True	AATAAA	-14	NA	32178261	32197924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18800.9	chr2	+	3192	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	-3	1172	-3	-1161	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGTTGGTAGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	32178261	32196761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ES.18801.1	chr2	-	836	5	FSM	ENSMUSG00000044627.12	ENSMUST00000050410.11	775	5	-51	-10	-51	10	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTCTCTACTAGCCC	NA	False	NA	-2	True	AATAAA	-24	NA	32178138	32168817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ES.18801.10	chr2	-	2679	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	0	-1	intron_retention	FALSE	canonical	2	6	junction_2	1731.22375431369	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTTCTGATCCTTGTC	NA	False	NA	-13	True	AATAAA	-13	NA	32178043	32168828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32169144_32170720_32171823_32176443_32177511_32177608_32177658_32177897
ES.18801.11	chr2	-	2307	4	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	3426	junction_2	83.7947227190087	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTCTGATCCTTGT	NA	False	NA	-14	True	AATAAA	-12	NA	32178044	32168829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32170816_32171697_32171823_32177608_32177658_32177897
ES.18801.13	chr2	-	3451	4	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-6	-2	intron_retention	FALSE	canonical	2	6	junction_2	1694.76297916716	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTTCTGATCCTTGT	NA	False	NA	-14	True	AATAAA	-12	NA	32178023	32168829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32170816_32171697_32171823_32176443_32177658_32177897
ES.18801.14	chr2	-	700	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1535.73516597101	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGTTCTGATCCTTG	NA	False	NA	-15	True	AATAAA	-11	NA	32178021	32168830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32169144_32170726_32170816_32171697_32171823_32177608_32177658_32177897
ES.18801.15	chr2	-	702	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1492.44472259444	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGTTCTGATCCTTG	NA	False	NA	-15	True	AATAAA	-11	NA	32178020	32168830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177651_32177893
ES.18801.16	chr2	-	4651	2	FSM	ENSMUSG00000044627.12	ENSMUST00000127131.3	4511	2	-41	-99	-3	99	multi-exon	FALSE	canonical	3	3619	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCAAGACCTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	32178084	32173193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32177658_32177897
ES.18801.17	chr2	-	3462	2	FSM	ENSMUSG00000044627.12	ENSMUST00000127131.3	4511	2	-5	1054	-5	-1054	multi-exon	FALSE	canonical	3	3619	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTAATTTAGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	32178048	32174346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32177658_32177897
ES.18801.2	chr2	-	1028	6	FSM	ENSMUSG00000044627.12	ENSMUST00000140406.8	919	6	-105	-4	-9	4	multi-exon	FALSE	canonical	2	10	junction_2	1714.39027062102	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATCCTTGTCTCTAC	NA	False	NA	-8	True	AATAAA	-18	NA	32178052	32168823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32169144_32170238_32170523_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ES.18801.3	chr2	-	1803	6	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	1715.62998341717	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178048	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32169144_32170720_32170816_32171697_32171823_32176443_32177511_32177608_32177658_32177897
ES.18801.4	chr2	-	3880	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	0	intron_retention	TRUE	canonical	0	0	junction_3	1521.86158618318	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178048	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32169144_32170720_32170816_32171697_32173391_32176032_32177658_32177897
ES.18801.5	chr2	-	3375	5	NNC	ENSMUSG00000044627.12	novel	768	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	1796.29596322544	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178043	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32170816_32171697_32171823_32176443_32177511_32177608_32177658_32177897
ES.18801.6	chr2	-	679	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	-55	-102	-49	0	multi-exon	FALSE	canonical	3	43	junction_4	1473.86522026269	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178136	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
ES.18801.7	chr2	-	615	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113397.9	580	4	-35	0	-9	0	multi-exon	FALSE	canonical	3	66	junction_2	1606.82426612938	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178052	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32169144_32170720_32170816_32177608_32177658_32177897
ES.18801.8	chr2	-	7347	2	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	891	0	intron_retention	FALSE	canonical	3	3583	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32177056	32168827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32170816_32171697
ES.18801.9	chr2	-	6495	4	NIC	ENSMUSG00000044627.12	novel	768	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	3309	junction_1	138.432494579689	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTTCTGATCCTTGTC	NA	False	NA	-13	True	AATAAA	-13	NA	32178022	32168828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32169144_32170720_32170816_32171697_32177658_32177897
ES.18802.1	chr2	+	156	1	Intergenic	novelGene_15593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAATTTA	3508	False	NA	NA	False	NA	NA	NA	32228549	32228705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32228500_32228700
ES.18802.2	chr2	+	319	1	Intergenic	novelGene_15594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAATAAAAT	3509	False	NA	NA	False	NA	NA	NA	32228550	32228869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32228600_32228900
ES.18803.1	chr2	-	3692	21	NNC	ENSMUSG00000026825.18	novel	3764	21	NA	NA	3441	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	5.49636243346452	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGTACCTCTGCTGGT	NA	False	NA	2	True	AATAAA	-24	NA	32239805	32198482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32199647_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210637_32213429_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32238760_32238871_32239760
ES.18803.2	chr2	-	3811	21	NNC	ENSMUSG00000026825.18	novel	2820	23	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.5281099844341	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCGTGTACCTCTGCTG	NA	False	NA	0	True	AATAAA	-22	NA	32243310	32198484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32199647_32200462_32200500_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210630_32213433_32213486_32213671_32213743_32217972_32218060_32223077_32223217_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
ES.18803.3	chr2	-	3459	10	NNC	ENSMUSG00000026825.18	novel	2820	23	NA	NA	-8564	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.142344427149	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCGTGTACCTCTGCTG	NA	False	NA	0	True	AATAAA	-22	NA	32219157	32198484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32199647_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210637_32213429_32213486_32213671_32213743_32217972
ES.18803.4	chr2	-	3807	20	NNC	ENSMUSG00000026825.18	novel	3764	21	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.75260535051339	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCGTGTACCTCTGCTG	NA	False	NA	0	True	AATAAA	-22	NA	32243340	32198484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32199650_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210630_32213433_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
ES.18803.5	chr2	-	2901	11	NNC	ENSMUSG00000026825.18	novel	3764	21	NA	NA	-13021	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	6.28012738724303	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCGTGTACCTCTGCTG	NA	False	NA	0	True	AATAAA	-22	NA	32223614	32198484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32199650_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210637_32213429_32213486_32213671_32213743_32217972_32218060_32223077
ES.18803.7	chr2	-	4605	20	NNC	ENSMUSG00000026825.18	novel	4605	22	NA	NA	3	3	intron_retention	FALSE	non_canonical	0	0	junction_4	5.01797323644338	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTGCGTGTACCTCTGC	NA	False	NA	-2	True	AATAAA	-20	NA	32243279	32198486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32200500_32202138_32202355_32202695_32202938_32204901_32205082_32205806_32205923_32206909_32207020_32210515_32210637_32213429_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
ES.18803.9	chr2	-	176	1	Intergenic	novelGene_15592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGGAGCAGACAGTGAC	NA	False	NA	NA	False	NA	NA	NA	32212835	32212659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32212700_32212800
ES.18804.1	chr2	+	2605	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_7	20.740114362028	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253029	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.10	chr2	+	3570	16	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	15	junction_4	23.6797147129962	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGCAGTCCCCACCAGC	NA	False	NA	4	True	AATAAA	-15	NA	32253052	32268307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.11	chr2	+	4285	17	NNC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_13	30.8251115164244	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGCAGTCCCCACCAGC	NA	False	NA	4	True	AATAAA	-15	NA	32253056	32268307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32253171_32253816_32253992_32254230_32255887_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267018_32267069_32267304_32267375_32267520_32267643_32267975
ES.18804.12	chr2	+	3457	14	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-15	0	intron_retention	FALSE	canonical	3	47	junction_3	16.51357698538	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253057	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.13	chr2	+	2779	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-10	0	intron_retention	FALSE	canonical	3	33	junction_3	18.9699598049126	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253062	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.14	chr2	+	2573	15	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-7	0	intron_retention	FALSE	canonical	2	6	junction_2	26.489216134657	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253065	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.15	chr2	+	4244	14	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	15	junction_4	22.3413539131933	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253067	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32262508_32264353_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.16	chr2	+	2713	19	NNC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4534733798085	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253098	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32253171_32253536_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.17	chr2	+	2596	19	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	29.8221580559005	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253143	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253634_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.18	chr2	+	3148	17	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	-17	0	intron_retention	FALSE	canonical	2	8	junction_1	24.3977457975117	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253192	32268311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.19	chr2	+	2697	16	NIC	ENSMUSG00000039205.17	novel	2771	17	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_1	23.9025800559967	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253211	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253311_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.2	chr2	+	3758	15	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	47	junction_3	15.6806458113569	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253029	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.20	chr2	+	2967	18	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	25.6950441548102	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253224	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.21	chr2	+	2992	18	NNC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.903370811908	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253241	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261218_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.22	chr2	+	2534	15	NIC	ENSMUSG00000039205.17	novel	2771	17	NA	NA	34	0	intron_retention	FALSE	canonical	1	1	junction_1	31.707206417083	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253243	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253311_32253816_32253992_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.23	chr2	+	3940	18	NIC	ENSMUSG00000039205.17	novel	4711	18	NA	NA	34	-9	intron_retention	TRUE	canonical	2	2	junction_17	28.6358837969155	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAAAAGCATACCCCAT	NA	False	NA	NA	False	NA	NA	NA	32253243	32270973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975_32268120_32269938
ES.18804.24	chr2	+	2873	16	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	15	0	intron_retention	FALSE	canonical	2	8	junction_1	26.4712842319539	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253379	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.25	chr2	+	2623	15	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-40	-2	intron_retention	FALSE	canonical	2	6	junction_2	27.5977853296608	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGCAGTCCCCACCAGC	NA	False	NA	4	True	AATAAA	-15	NA	32253525	32268307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.26	chr2	+	2632	16	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	69	0	intron_retention	FALSE	canonical	2	8	junction_1	22.5207065213821	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253634	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.27	chr2	+	3563	16	NIC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	75	0	intron_retention	FALSE	canonical	2	8	junction_1	24.3361642188922	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253640	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32267375_32267520_32267643_32267975
ES.18804.28	chr2	+	2569	16	NIC	ENSMUSG00000039205.17	novel	2871	17	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	18.907494105072	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253698	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.29	chr2	+	3331	12	NIC	ENSMUSG00000039205.17	novel	2871	17	NA	NA	-69	0	intron_retention	FALSE	canonical	2	6	junction_1	29.2989718602226	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253698	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253992_32257314_32257545_32260058_32260138_32260253_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.3	chr2	+	2725	16	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_4	21.1281802339908	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253029	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.30	chr2	+	2787	16	FSM	ENSMUSG00000039205.17	ENSMUST00000113338.9	2666	16	-122	1	-68	0	multi-exon	FALSE	canonical	3	33	junction_2	18.8985596158955	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253699	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.31	chr2	+	2713	15	FSM	ENSMUSG00000039205.17	ENSMUST00000113331.8	2604	15	-115	6	-66	0	multi-exon	FALSE	canonical	3	47	junction_2	14.676789950984	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253701	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.32	chr2	+	2122	13	NNC	ENSMUSG00000039205.17	novel	2871	17	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_2	24.8294180358703	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32257493	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32257545_32260043_32260138_32260259_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.4	chr2	+	2657	18	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	21.2762355855551	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253038	32268311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.5	chr2	+	2886	19	NNC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.2785932611894	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	False	NA	6	True	AATAAA	-17	NA	32253043	32268309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32253171_32253444_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.6	chr2	+	2578	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	18.9868375460475	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253044	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.7	chr2	+	2817	18	NNC	ENSMUSG00000039205.17	novel	2973	18	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.9022629364355	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCCACCAGCACTGTGT	NA	False	NA	11	True	AATAAA	-22	NA	32253045	32268314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32253171_32253444_32253669_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.8	chr2	+	2558	17	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	23.2912939743587	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253049	32268310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18804.9	chr2	+	2723	16	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	47	junction_3	15.4050496771531	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCCACCAGCACTGTGT	NA	False	NA	11	True	AATAAA	-22	NA	32253050	32268314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ES.18805.1	chr2	-	183	1	Intergenic	novelGene_15595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAGAAACT	NA	False	NA	NA	False	NA	NA	NA	32264003	32263820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32263800_32264000
ES.18806.1	chr2	-	662	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	12	6	12	-6	multi-exon	FALSE	canonical	3	268	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCCCCTTCTTCTTTG	NA	False	NA	-3	True	ATTAAA	-15	NA	32271938	32269118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32269546_32271703
ES.18806.2	chr2	-	2805	1	NIC	ENSMUSG00000039195.5	novel	680	2	NA	NA	25	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCCCCTTCTTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	32271925	32269120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32269100_32271900
ES.18807.1	chr2	+	2212	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	-264	3030	-264	1166	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGACAATGGTGCTGC	6828	False	NA	22	True	AATAAA	-22	NA	32285643	32292754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ES.18807.10	chr2	+	1914	6	NIC	ENSMUSG00000026820.6	novel	4978	7	NA	NA	-110	1158	intron_retention	FALSE	canonical	3	184	junction_5	5.47722557505166	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTCTGGTCTGACAAT	7526	False	NA	14	True	AATAAA	-14	NA	32286341	32292746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291617_32292187
ES.18807.3	chr2	+	1386	7	NNC	ENSMUSG00000026820.6	novel	4978	7	NA	NA	-188	1161	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	86.9405927439344	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTGGTCTGACAATGGT	7448	False	NA	17	True	AATAAA	-17	NA	32286263	32292749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32286563_32287707_32287748_32290061_32290121_32290457_32290565_32290889_32291091_32291498_32291617_32292187
ES.18807.4	chr2	+	1566	8	NNC	ENSMUSG00000026820.6	novel	4978	7	NA	NA	-179	1163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.6293910248397	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTCTGACAATGGTGC	7457	False	NA	19	True	AATAAA	-19	NA	32286272	32292751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32286563_32287442_32287472_32287549_32287748_32290061_32290121_32290457_32290565_32290889_32291091_32291498_32291617_32292187
ES.18807.5	chr2	+	3039	1	NIC	ENSMUSG00000026820.6	novel	4978	7	NA	NA	-176	-1721	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTCTCAAAAAATTTTA	7460	False	NA	NA	False	NA	NA	NA	32286275	32289314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32286300_32289300
ES.18807.7	chr2	+	1439	8	NNC	ENSMUSG00000026820.6	novel	4978	7	NA	NA	-172	1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.0306067985252	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTCTGGTCTGACAAT	7464	False	NA	14	True	AATAAA	-14	NA	32286279	32292746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32286563_32287442_32287472_32287707_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ES.18807.8	chr2	+	2409	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	372	2197	-172	1999	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACCTTCATCTCTCCA	7464	False	NA	NA	False	NA	NA	NA	32286279	32293587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ES.18807.9	chr2	+	5587	5	ISM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	373	-3	-171	3	intron_retention	FALSE	canonical	3	185	junction_4	5.1234753829798	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTGGTCATGGTG	7465	False	NA	NA	False	NA	NA	NA	32286280	32295787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889
ES.18808.1	chr2	-	4211	11	NNC	ENSMUSG00000026819.16	novel	3278	10	NA	NA	1	26005	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	27.1265552549527	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCACATCTAAGGACTA	8154	False	NA	NA	False	NA	NA	NA	32341456	32278493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32278502_32303575_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.10	chr2	-	3221	10	NNC	ENSMUSG00000026819.16	novel	3278	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5025448289867	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	8173	False	NA	-9	True	AATAAA	-14	NA	32341437	32304501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32306298_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.11	chr2	-	3122	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113307.9	2541	10	-11	-570	-11	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	9449	False	NA	-9	True	AATAAA	-14	NA	32314028	32304501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32313805
ES.18808.12	chr2	-	2728	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	-7	557	-7	13	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATTTTTTTATTCAT	8146	False	NA	NA	False	NA	NA	NA	32341464	32305058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.13	chr2	-	2948	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113308.8	2643	10	-399	94	18	-4	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCCTGTCATTTTCAAG	2314	False	NA	NA	False	NA	NA	NA	32321163	32305075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32320540
ES.18808.2	chr2	-	4232	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	2	-956	2	953	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCATGGTTGTACACT	8155	False	NA	NA	False	AATAAA	-17	NA	32341455	32303545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.3	chr2	-	4448	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113308.8	2643	10	-372	-1433	-5	950	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTTGTAC	2341	False	NA	NA	False	AATAAA	-14	NA	32321136	32303548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32320540
ES.18808.4	chr2	-	3329	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	-44	-7	-44	4	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGGTTTTTCTGCT	8109	False	NA	-2	True	AATAAA	-21	NA	32341501	32304494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.5	chr2	-	4185	9	NIC	ENSMUSG00000026819.16	novel	3294	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	77	junction_4	7.99609279585974	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8135	False	NA	-6	True	AATAAA	-17	NA	32341475	32304498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32311403_32311484_32311612_32341078
ES.18808.6	chr2	-	3369	11	FSM	ENSMUSG00000026819.16	ENSMUST00000028160.15	3294	11	-76	1	-53	-1	multi-exon	FALSE	canonical	3	9	junction_7	31.7200252206709	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAGCCAGGGTTTTT	8100	False	NA	-7	True	AATAAA	-16	NA	32341510	32304499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32341078
ES.18808.8	chr2	-	3170	11	NNC	ENSMUSG00000026819.16	novel	3294	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.1265552549527	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	8176	False	NA	-9	True	AATAAA	-14	NA	32341434	32304501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32304913_32304997_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ES.18808.9	chr2	-	3530	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113308.8	2643	10	-407	-480	10	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	2306	False	NA	-9	True	AATAAA	-14	NA	32321171	32304501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32320540
ES.18809.1	chr2	+	2949	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1709	-8	1709	8	multi-exon	FALSE	canonical	3	24	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCTCTTGTCTTTATTG	NA	False	NA	NA	False	ATTAAA	-26	NA	32342177	32346973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32342962_32344808
ES.18809.2	chr2	+	3441	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1734	-525	1734	525	multi-exon	FALSE	canonical	3	24	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGTTATGGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	32342202	32347490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32342962_32344808
ES.18809.3	chr2	+	3896	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1814	-1060	1814	1060	multi-exon	FALSE	canonical	3	24	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGTCTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	32342282	32348025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32342962_32344808
ES.18809.4	chr2	+	5460	3	NNC	ENSMUSG00000039164.3	novel	4650	2	NA	NA	1815	3761	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	32342283	32350726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32342962_32344808_32348348_32349483
ES.1881.1	chr1	+	556	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3187	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	55.1180551180827	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCATGCCTCTTGTGT	NA	False	NA	8	True	AATAAA	-14	NA	171049435	171053939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171049548_171052852_171052936_171053234_171053368_171053711
ES.18810.1	chr2	+	194	1	Intergenic	novelGene_15596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCATAAGCTTTAACT	NA	False	NA	NA	False	NA	NA	NA	32352503	32352697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32352500_32352700
ES.18811.1	chr2	+	133	1	Intergenic	novelGene_15597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	32355769	32355902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32355800_32355900
ES.18812.1	chr2	+	206	1	Intergenic	novelGene_15598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	32356874	32357080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32356900_32357100
ES.18813.1	chr2	+	177	1	Intergenic	novelGene_15599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	32358823	32359000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32358800_32359000
ES.18814.1	chr2	+	4338	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	-114	-1	-87	1	multi-exon	FALSE	canonical	3	103	junction_7	13.8115893364956	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTGTTTCTTTTCA	1495	False	NA	24	True	ATTAAA	-24	NA	32425256	32459769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.12	chr2	+	3565	12	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.7582036104286	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTTTTTGTTGGTGTT	1573	False	NA	16	True	ATTAAA	-16	NA	32425334	32459761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32425395_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.13	chr2	+	10141	1	Genic_Genomic	ENSMUSG00000039157.13	novel	NA	NA	NA	NA	-7	9275	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	1575	False	NA	NA	False	NA	NA	NA	32425336	32435477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_32425300_32435500
ES.18814.14	chr2	+	3806	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.533013400531	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	1580	False	NA	17	True	ATTAAA	-17	NA	32425341	32459762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32425642_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.15	chr2	+	4369	12	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	50.4593773280109	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	1580	False	NA	17	True	ATTAAA	-17	NA	32425341	32459762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32434624_32434748_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.17	chr2	+	4372	10	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	103	junction_6	14.3947864361792	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	1590	False	NA	17	True	ATTAAA	-17	NA	32425351	32459762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.18	chr2	+	1491	3	NNC	ENSMUSG00000039157.13	novel	370	3	NA	NA	1	9271	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	1610	False	NA	NA	False	NA	NA	NA	32425371	32435473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32425851_32426081_32426245_32434624
ES.18814.19	chr2	+	4492	12	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-103	2	intron_retention	FALSE	canonical	0	0	junction_1	51.0159592595646	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGTTGGTGTTTCT	1880	False	NA	19	True	ATTAAA	-19	NA	32425641	32459764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32434203_32434748_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.2	chr2	+	4275	11	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-61	1	intron_retention	FALSE	canonical	2	2	junction_7	39.8699134686796	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1521	False	NA	18	True	ATTAAA	-18	NA	32425282	32459763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455630_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.20	chr2	+	5649	9	NIC	ENSMUSG00000039157.13	novel	5935	10	NA	NA	-32	1	intron_retention	FALSE	canonical	3	114	junction_1	11.8894648744172	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1951	False	NA	18	True	ATTAAA	-18	NA	32425712	32459763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32426245_32448038_32448160_32448329_32450168_32453430_32453478_32453613_32453772_32455412_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.21	chr2	+	3988	12	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	18	2	intron_retention	FALSE	canonical	0	0	junction_2	50.4593773280109	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGTTGGTGTTTCT	2001	False	NA	19	True	ATTAAA	-19	NA	32425762	32459764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32434624_32434786_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.22	chr2	+	3229	9	ISM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	22957	1	18126	-1	3prime_fragment	FALSE	canonical	3	103	junction_5	14.6628782986152	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGGTGTTTCTTTT	NA	False	NA	22	True	ATTAAA	-22	NA	32448327	32459767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.23	chr2	+	5489	7	ISM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	23220	6	18389	0	intron_retention	FALSE	canonical	3	103	junction_4	13.7072567966347	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	32448590	32459762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499
ES.18814.24	chr2	+	3142	7	ISM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	27990	9	23159	-3	3prime_fragment	FALSE	canonical	3	103	junction_3	16.2754074876449	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGCTTTTTGTTGGTG	1048	False	NA	14	True	ATTAAA	-14	NA	32453360	32459759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.25	chr2	+	2873	5	ISM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	30039	6	25208	0	3prime_fragment	FALSE	canonical	3	103	junction_1	19.8415599185145	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	3097	False	NA	17	True	ATTAAA	-17	NA	32455409	32459762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.3	chr2	+	5206	9	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-46	-3	intron_retention	FALSE	canonical	3	114	junction_1	10.0179526351446	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGCTTTTTGTTGGTG	1536	False	NA	14	True	ATTAAA	-14	NA	32425297	32459759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455817_32456280_32456403_32456499
ES.18814.4	chr2	+	4285	11	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-46	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	40.3554209493595	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGCTTTTTGTTGGTGT	1536	False	NA	15	True	ATTAAA	-15	NA	32425297	32459760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453778_32455421_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.5	chr2	+	5983	10	FSM	ENSMUSG00000039157.13	ENSMUST00000136816.8	5935	10	-46	-2	-46	2	multi-exon	FALSE	canonical	3	103	junction_6	14.2265618379282	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGTTGGTGTTTCT	1536	False	NA	19	True	ATTAAA	-19	NA	32425297	32459764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32426245_32448038_32448160_32448329_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.6	chr2	+	4060	12	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.487950244844	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTGTTGGTGTTTC	1536	False	NA	18	True	ATTAAA	-18	NA	32425297	32459763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32425851_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18814.7	chr2	+	4390	10	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-43	0	intron_retention	FALSE	canonical	3	103	junction_7	12.9013349869091	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1539	False	NA	23	True	ATTAAA	-23	NA	32425300	32459768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456570_32457406
ES.18814.8	chr2	+	1778	2	NNC	ENSMUSG00000039157.13	novel	370	3	NA	NA	-28	9271	intron_retention	FALSE	canonical	2	3	junction_1	0	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	1554	False	NA	NA	False	NA	NA	NA	32425315	32435473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32426245_32434624
ES.18814.9	chr2	+	4068	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.9482030628919	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1559	False	NA	23	True	ATTAAA	-23	NA	32425320	32459768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32425877_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ES.18815.1	chr2	+	874	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	-11	6	-11	-6	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCTCTGCCATCCTT	4762	False	NA	17	True	AATAAA	-18	NA	32460858	32463585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
ES.18815.2	chr2	+	780	3	NIC	ENSMUSG00000026810.13	novel	869	4	NA	NA	-11	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	196	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTCTCTCTGCCAT	4762	False	NA	13	True	AATAAA	-14	NA	32460858	32463581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32460925_32462308_32462412_32462970
ES.18815.3	chr2	+	2395	2	ISM	ENSMUSG00000026810.13	ENSMUST00000140592.8	1412	3	24	-6	15	6	intron_retention	FALSE	canonical	3	274	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTCTCTCTGCCAT	4797	False	NA	13	True	AATAAA	-14	NA	32460893	32463581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32460925_32461217
ES.18815.4	chr2	+	1978	3	NNC	ENSMUSG00000026810.13	novel	655	3	NA	NA	16	-8	intron_retention	FALSE	canonical	0	0	junction_1	196.5	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTCTCTGCCATCC	4798	False	NA	15	True	AATAAA	-16	NA	32460894	32463583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32462157_32462308_32462412_32462970
ES.18815.5	chr2	+	1107	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	39	-491	39	-7	multi-exon	FALSE	canonical	3	393	junction_2	5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCTCTGCCATCCT	4821	False	NA	16	True	AATAAA	-17	NA	32460917	32463584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32461308_32462308_32462412_32462970
ES.18815.6	chr2	+	985	4	NNC	ENSMUSG00000026810.13	novel	869	4	NA	NA	41	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	186.72082547661	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTCTCTCTGCCATC	4823	False	NA	14	True	AATAAA	-15	NA	32460919	32463582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32461100_32461217_32461308_32462308_32462412_32462970
ES.18815.7	chr2	+	925	4	NNC	ENSMUSG00000026810.13	novel	655	3	NA	NA	54	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	187.192117592833	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTCTCTCTGCCATC	4836	False	NA	14	True	AATAAA	-15	NA	32460932	32463582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32461053_32461217_32461308_32462308_32462412_32462970
ES.18816.1	chr2	-	158	3	Antisense	novelGene_ENSMUSG00000026810.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATACATCCGGTTCC	NA	False	NA	NA	False	NA	NA	NA	32462350	32460899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_32460931_32461222_32461307_32462307
ES.18817.1	chr2	+	3275	10	Fusion	ENSMUSG00000079442.13_ENSMUSG00000026811.19	novel	3626	6	NA	NA	-32	0	multi-exon	FALSE	canonical	0	0	junction_5	41.1879162430493	150	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	NA	False	NA	5	True	AATAAA	-14	NA	32477074	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32489706_32489849_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.10	chr2	+	4471	3	FSM	ENSMUSG00000079442.13	ENSMUST00000192934.2	3999	3	-472	0	14	0	multi-exon	FALSE	canonical	3	39	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTCTGTGGTAA	NA	False	NA	7	True	NA	NA	NA	32477120	32487713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32477694_32479456_32479643_32484001
ES.18817.11	chr2	+	5727	4	NIC	ENSMUSG00000079442.13	novel	2826	5	NA	NA	14	-1	intron_retention	FALSE	canonical	3	25	junction_2	5.79271573232759	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCAACCACTTCCTCC	NA	False	NA	15	True	AATAAA	-17	NA	32477120	32489709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32479643_32484001_32484415_32485705_32485814_32487025
ES.18817.12	chr2	+	1822	5	FSM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	-370	1374	116	0	multi-exon	FALSE	canonical	3	25	junction_3	5.71729831301464	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTCTGTGGTAA	NA	False	NA	7	True	NA	NA	NA	32477266	32487713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ES.18817.13	chr2	+	2412	7	NNC	ENSMUSG00000026811.19	novel	2536	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	40.8809246470772	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3287	False	NA	5	True	AATAAA	-14	NA	32496955	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32497124_32498053_32498109_32499237_32499329_32502297_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.14	chr2	+	2396	3	FSM	ENSMUSG00000026811.19	ENSMUST00000126636.8	438	3	-79	-1879	3	29	multi-exon	FALSE	canonical	3	48	junction_1	25.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTTTTTTGTTTGTTG	3307	False	NA	NA	False	NA	NA	NA	32496975	32506860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32497124_32502235_32502416_32504792
ES.18817.16	chr2	+	2307	5	NIC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3308	False	NA	5	True	AATAAA	-14	NA	32496976	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.17	chr2	+	2526	5	ISM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	-46	3958	19	29	5prime_fragment	FALSE	canonical	3	38	junction_2	23.4027242004003	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTTTTTTGTTTGTTG	3323	False	NA	NA	False	NA	NA	NA	32496991	32506860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792
ES.18817.18	chr2	+	2438	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	-46	2	19	0	multi-exon	FALSE	canonical	3	38	junction_2	28.6225435627234	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3323	False	NA	5	True	AATAAA	-14	NA	32496991	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.19	chr2	+	2339	6	NIC	ENSMUSG00000026811.19	novel	2536	7	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	41.0482642751189	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3331	False	NA	5	True	AATAAA	-14	NA	32496999	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32497124_32498053_32498109_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.2	chr2	+	1663	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-32	1995	-32	2	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTCTGTGGTAACG	NA	False	NA	9	True	NA	NA	NA	32477074	32487715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ES.18817.20	chr2	+	2370	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	32	0	-18	0	multi-exon	FALSE	canonical	3	16	junction_1	35.6202189774291	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3336	False	NA	5	True	AATAAA	-14	NA	32497004	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.21	chr2	+	2615	8	NNC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	36.9052841744919	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCAGTGTTCTGTGTC	3336	False	NA	3	True	AATAAA	-12	NA	32497004	32510814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508216_32508409_32508508_32508617_32509351
ES.18817.22	chr2	+	2740	8	NNC	ENSMUSG00000026811.19	novel	2536	7	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	40.1918866825388	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCAGTGTTCTGTGTC	3340	False	NA	3	True	AATAAA	-12	NA	32497008	32510814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32497124_32498053_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508216_32508409_32508508_32508617_32509351
ES.18817.23	chr2	+	2536	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095045.9	2536	7	-2	2	-2	-2	multi-exon	FALSE	canonical	2	6	junction_2	37.4718412796714	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCAGTGTTCTGTGTC	3352	False	NA	3	True	AATAAA	-12	NA	32497020	32510814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32497124_32498053_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.24	chr2	+	2411	4	ISM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	50	3985	0	0	5prime_fragment	FALSE	canonical	3	16	junction_1	34.7658836600865	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3354	False	NA	NA	False	NA	NA	NA	32497022	32506831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792
ES.18817.25	chr2	+	2432	5	NNC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	1	29	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.7086084422871	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTTTTTTGTTTGTTG	3355	False	NA	NA	False	NA	NA	NA	32497023	32506860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32497124_32498053_32498109_32499237_32499329_32502297_32502416_32504792
ES.18817.26	chr2	+	2283	6	NNC	ENSMUSG00000026811.19	novel	2361	7	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	31.5658042824826	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCAGTGTTCTGTGTC	4383	False	NA	3	True	AATAAA	-12	NA	32498051	32510814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32498109_32499237_32499329_32502235_32502416_32504792_32505181_32508508_32508617_32509355
ES.18817.27	chr2	+	2361	5	NNC	ENSMUSG00000026811.19	novel	2402	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	45.5487376334405	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	5397	False	NA	5	True	AATAAA	-14	NA	32499065	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32499329_32502297_32502416_32504792_32505200_32508508_32508617_32509351
ES.18817.28	chr2	+	3907	1	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	7857	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	NA	False	NA	7	True	AATAAA	-16	NA	32506911	32510818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32506900_32510800
ES.18817.29	chr2	+	2688	2	ISM	ENSMUSG00000026811.19	ENSMUST00000081879.12	2345	6	8918	0	8339	0	3prime_fragment	FALSE	canonical	3	96	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	NA	False	NA	5	True	AATAAA	-14	NA	32507393	32510816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32508617_32509351
ES.18817.3	chr2	+	3658	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-32	0	-32	0	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	False	NA	16	True	AATAAA	-18	NA	32477074	32489710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ES.18817.4	chr2	+	1834	6	NNC	ENSMUSG00000079442.13	novel	3626	6	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	16.2283702200806	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTCTGTGGTAA	NA	False	NA	7	True	NA	NA	NA	32477080	32487713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32486846
ES.18817.5	chr2	+	4002	5	FSM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	-556	-620	-26	-3	multi-exon	FALSE	canonical	3	25	junction_3	5.71729831301464	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTCAACCACTTCCT	NA	False	NA	13	True	AATAAA	-15	NA	32477080	32489707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ES.18817.7	chr2	+	3632	6	NNC	ENSMUSG00000079442.13	novel	3626	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.4365446490435	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	False	NA	16	True	AATAAA	-18	NA	32477090	32489710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484405_32485705_32485814_32487025
ES.18817.8	chr2	+	4841	5	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-5	2	-5	-2	intron_retention	FALSE	canonical	3	25	junction_4	7.92148975887743	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCAACCACTTCCTC	NA	False	NA	14	True	AATAAA	-16	NA	32477101	32489708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705
ES.18817.9	chr2	+	2843	5	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	-1	1996	-1	1	intron_retention	FALSE	canonical	3	25	junction_4	7.92148975887743	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTCTCTGTGGTAAC	NA	False	NA	8	True	NA	NA	NA	32477105	32487714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705
ES.18818.1	chr2	-	189	1	Intergenic	novelGene_15600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACACTTTCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	32479075	32478886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32478900_32479100
ES.18819.1	chr2	-	459	2	Intergenic	novelGene_15601	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGCCTTTAGAACGGT	9223	False	NA	NA	False	NA	NA	NA	32484203	32482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32483193_32483957
ES.1882.1	chr1	-	2916	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	4	1792	4	-1	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTGTTTCACAGATC	9513	False	NA	NA	False	AGTAAA	-15	NA	171050079	171045371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ES.1882.2	chr1	-	1678	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	12	3022	-6	-670	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAAGACCAAAGAATGG	9521	False	NA	NA	False	NA	NA	NA	171050071	171046601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ES.1882.3	chr1	-	2077	8	NIC	ENSMUSG00000005674.10	novel	2812	9	NA	NA	0	-749	intron_retention	FALSE	canonical	3	111	junction_2	8.15913160645351	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCTGGTTTCTCCAT	9575	False	NA	91	True	AAAAAG	-12	NA	171050017	171046680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171049209_171049472
ES.1882.4	chr1	-	1519	10	NNC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-749	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	40.383653947765	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCTGGTTTCTCCAT	9575	False	NA	91	True	AAAAAG	-12	NA	171050017	171046680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047967_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ES.1882.5	chr1	-	1510	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	1	-749	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCTGGTTTCTCCAT	9510	False	NA	91	True	AAAAAG	-12	NA	171050082	171046680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
ES.1882.6	chr1	-	1718	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	-209	3203	-209	-851	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTTATTTTTGTTT	9300	False	NA	-11	True	AGTAAA	-42	NA	171050292	171046782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ES.1882.7	chr1	-	2601	5	NIC	ENSMUSG00000005674.10	novel	2034	7	NA	NA	0	-853	intron_retention	FALSE	canonical	3	129	junction_1	1.6393596310755	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTGTTATTTTTGT	9572	False	NA	-13	True	AGTAAA	-40	NA	171050020	171046784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171047230_171047362_171047755_171047869_171047993_171048115_171049209_171049472
ES.1882.8	chr1	-	1320	9	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	12	-853	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	42.9789192511864	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTGTTATTTTTGT	9603	False	NA	-13	True	AGTAAA	-40	NA	171049989	171046784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171049140_171049209_171049472_171049723_171049943
ES.1882.9	chr1	-	1340	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-854	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTTTGTTATTTTTG	9575	False	NA	-14	True	AGTAAA	-39	NA	171050017	171046785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
ES.18820.1	chr2	+	2051	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	14	-2	13	2	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32515462	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.10	chr2	+	3001	5	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3337	-3	384	-1	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32518785	32525069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.11	chr2	+	2051	6	NNC	ENSMUSG00000026817.15	novel	752	4	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.109131517672	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	False	NA	13	True	AATAAA	-17	NA	32519293	32525066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32519422_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.12	chr2	+	2070	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	-31	-5	-31	-1	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGAGTGTATTGAAAC	NA	False	NA	16	True	AATAAA	-20	NA	32519484	32525069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.13	chr2	+	1061	2	NNC	ENSMUSG00000026817.15	novel	752	4	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32519504	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32519576_32524078
ES.18820.14	chr2	+	1779	7	NNC	ENSMUSG00000026817.15	novel	2034	6	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	124.303392284094	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32519516	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652_32523771_32524028
ES.18820.15	chr2	+	820	5	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	258	1188	241	464	3prime_fragment	FALSE	canonical	3	270	junction_4	19.9374020373769	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGGATTGCTCCTTTCC	NA	False	NA	NA	False	ACTAAA	-16	NA	32519773	32523876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.16	chr2	+	1919	5	NNC	ENSMUSG00000026817.15	novel	2034	6	NA	NA	326	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	123.582715215357	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGAAGTGAGTGTATT	NA	False	NA	11	True	AATAAA	-15	NA	32519858	32525064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32519893_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.17	chr2	+	1236	1	Genic_Genomic	ENSMUSG00000026817.15	novel	NA	NA	NA	NA	5218	916	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	32524750	32525986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_32524800_32526000
ES.18820.2	chr2	+	899	7	NNC	ENSMUSG00000026817.15	novel	2063	7	NA	NA	50	465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.542831352729	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGGATTGCTCCTTTCCT	NA	False	NA	NA	False	ACTAAA	-17	NA	32515499	32523877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32515627_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.4	chr2	+	2018	7	NNC	ENSMUSG00000026817.15	novel	752	4	NA	NA	-1364	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	111.500996507754	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32517037	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32517093_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.5	chr2	+	2013	7	NNC	ENSMUSG00000026817.15	novel	752	4	NA	NA	-951	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	112.19539008157	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	False	NA	13	True	AATAAA	-17	NA	32517450	32525066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32517503_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.6	chr2	+	2166	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2811	-2	-142	2	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32518259	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.7	chr2	+	834	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	2954	1187	1	467	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTGCTCCTTTCCTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	32518402	32523879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ES.18820.8	chr2	+	4758	4	NIC	ENSMUSG00000026817.15	novel	2063	7	NA	NA	42	0	intron_retention	FALSE	canonical	3	200	junction_1	42.9444085093999	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	False	NA	13	True	AATAAA	-17	NA	32518443	32525066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32518501_32519860_32519897_32520246_32523498_32523652
ES.18820.9	chr2	+	2112	5	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3020	-2	67	2	intron_retention	FALSE	canonical	3	200	junction_1	49.3583832798442	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTGAGTGTATTGAAA	NA	False	NA	15	True	AATAAA	-19	NA	32518468	32525068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305
ES.18821.1	chr2	+	234	1	Intergenic	novelGene_15602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACTGCCCAGCAAGAA	3739	False	NA	NA	False	AAGAAA	-42	NA	32528764	32528998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32528800_32529000
ES.18822.1	chr2	-	3992	1	Intergenic	novelGene_15603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACTGGATCTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	32535284	32531292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32531300_32535300
ES.18823.1	chr2	+	3053	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-142	511	-142	29	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGGGCAATTATG	413	False	NA	54	True	AATAAA	-42	NA	32536464	32572159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.10	chr2	+	3062	15	NNC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	-48	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_5	58.5184429326798	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGTGCCCCTCTGGGT	507	False	NA	22	True	AATAAA	-10	NA	32536558	32572127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562713_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.13	chr2	+	3539	14	ISM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	-2	5	-2	-5	intron_retention	FALSE	canonical	3	45	junction_1	48.0774769198868	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAATTAGTTCCAGCAA	580	False	NA	NA	False	AATAAA	-19	NA	32536631	32572676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207
ES.18823.14	chr2	+	2682	15	NNC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	57.6066889540173	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	584	False	NA	29	True	AATAAA	-17	NA	32536635	32572134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571623
ES.18823.15	chr2	+	3711	14	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	154	junction_1	26.5080092842337	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGCTTCAATTAGTTC	584	False	NA	NA	False	AATAAA	-13	NA	32536635	32572670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.16	chr2	+	5506	14	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	6	1788	intron_retention	FALSE	canonical	3	154	junction_1	26.5080092842337	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGGTGACGTGACTG	588	False	NA	NA	False	AATAAA	-13	NA	32536639	32574469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.17	chr2	+	2987	14	FSM	ENSMUSG00000026814.17	ENSMUST00000113272.8	3021	14	38	-4	11	4	multi-exon	FALSE	canonical	3	154	junction_1	25.0613448545197	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	593	False	NA	29	True	AATAAA	-17	NA	32536644	32572134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207
ES.18823.19	chr2	+	3061	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	72	289	45	251	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATGACTCTTGTGGGC	627	False	NA	NA	False	TATAAA	-18	NA	32536678	32572381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.2	chr2	+	2810	14	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	-68	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	59.3626902530777	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCCTCTGGGTTGTATG	487	False	NA	28	True	AATAAA	-16	NA	32536538	32572133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.20	chr2	+	2968	13	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	64	2	intron_retention	FALSE	canonical	1	4	junction_7	60.7441698162603	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCCTCTGGGTTGTAT	646	False	NA	27	True	AATAAA	-15	NA	32536697	32572132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32567564_32567703_32567934_32567974_32568467_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.21	chr2	+	1994	11	ISM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	25594	549	-627	2	3prime_fragment	FALSE	canonical	3	185	junction_6	18.6279360101972	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCCTCTGGGTTGTAT	NA	False	NA	27	True	AATAAA	-15	NA	32562227	32572132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.22	chr2	+	1531	8	ISM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	26969	549	225	2	3prime_fragment	FALSE	canonical	3	185	junction_3	18.4379820933168	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCCTCTGGGTTGTAT	NA	False	NA	27	True	AATAAA	-15	NA	32563602	32572132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.23	chr2	+	3749	3	NIC	ENSMUSG00000026814.17	novel	935	8	NA	NA	3916	4	intron_retention	FALSE	canonical	3	227	junction_1	7	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	1532	False	NA	29	True	AATAAA	-17	NA	32567293	32572134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32567703_32567934_32570348_32571207
ES.18823.24	chr2	+	1762	6	ISM	ENSMUSG00000026814.17	ENSMUST00000113272.8	3021	14	30722	-2	3951	2	3prime_fragment	FALSE	canonical	3	185	junction_2	18.8	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCCTCTGGGTTGTAT	1567	False	NA	27	True	AATAAA	-15	NA	32567328	32572132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207
ES.18823.25	chr2	+	1246	6	ISM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	31299	554	4555	-3	3prime_fragment	FALSE	canonical	3	185	junction_1	21.0180874486714	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGTGCCCCTCTGGGT	-6	True	NA	22	True	AATAAA	-10	NA	32567932	32572127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.4	chr2	+	3502	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	-67	-13	-67	2	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTCCAGCAACACAGTC	488	False	NA	NA	False	AATAAA	-26	NA	32536539	32572683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.5	chr2	+	4409	13	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	-67	4	intron_retention	FALSE	canonical	3	154	junction_1	27.3255832508658	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	488	False	NA	29	True	AATAAA	-17	NA	32536539	32572134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32570348_32571207_32571310_32571448
ES.18823.7	chr2	+	3260	14	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	-57	3	intron_retention	FALSE	canonical	3	154	junction_1	26.5080092842337	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCCCTCTGGGTTGTATG	498	False	NA	28	True	AATAAA	-16	NA	32536549	32572133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32569155_32570292_32570348_32571207_32571310_32571448
ES.18823.9	chr2	+	3425	14	NIC	ENSMUSG00000026814.17	novel	3403	15	NA	NA	-48	4	intron_retention	FALSE	canonical	3	45	junction_1	49.5469414624558	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTGGGTTGTATGG	507	False	NA	29	True	AATAAA	-17	NA	32536558	32572134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ES.18824.1	chr2	+	172	1	Intergenic	novelGene_15606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	743	False	NA	NA	False	NA	NA	NA	32588375	32588547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32588400_32588500
ES.18825.1	chr2	-	166	1	Intergenic	novelGene_15604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATTGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	32547385	32547219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32547200_32547400
ES.18826.1	chr2	-	5030	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	27	-2784	-23	2784	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTGCAGACACCTGGA	NA	False	NA	NA	False	AAAAAG	-8	NA	32584170	32569836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.10	chr2	-	2319	14	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	20	0	intron_retention	FALSE	canonical	3	24	junction_10	96.2645516549339	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584177	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.11	chr2	-	2251	9	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-172	0	intron_retention	FALSE	canonical	3	280	junction_6	31.1204815997439	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32578021	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32577528_32577613_32577676_32577771_32577850_32577931
ES.18826.12	chr2	-	2309	16	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_15	123.428611845966	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32594194	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32593836_32593974_32594097
ES.18826.13	chr2	-	2372	10	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	1988	0	intron_retention	FALSE	canonical	2	2	junction_3	108.698132231503	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32581268	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575604_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578047_32581201
ES.18826.14	chr2	-	2266	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	15	junction_5	96.3926917375387	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584176	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576671_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.15	chr2	-	3463	6	NIC	ENSMUSG00000009566.13	novel	2404	13	NA	NA	-448	0	intron_retention	FALSE	canonical	3	298	junction_3	25.1920622419047	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32578297	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32576656_32576749_32576898_32577156_32577850_32577931
ES.18826.16	chr2	-	3300	11	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-24	0	intron_retention	FALSE	canonical	3	317	junction_5	35.0742070473446	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584171	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.17	chr2	-	2722	14	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	11	0	intron_retention	FALSE	canonical	2	2	junction_3	102.971702897607	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584186	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575604_32575730_32575882_32576565_32576656_32576749_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.18	chr2	-	2353	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	2893	0	intron_retention	FALSE	canonical	2	9	junction_14	97.3953650994602	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32591150	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32590872
ES.18826.19	chr2	-	2418	13	NNC	ENSMUSG00000009566.13	novel	2404	13	NA	NA	16	-1	intron_retention	FALSE	canonical	3	24	junction_9	100.086490374853	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTATTCTCCTAGCTC	NA	False	NA	-15	True	AATAAA	-18	NA	32584181	32572622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.2	chr2	-	2267	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	11	-5	11	5	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCCTAGCTCCCTCATC	NA	False	NA	-8	True	AATAAA	-25	NA	32584186	32572615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.20	chr2	-	2434	13	FSM	ENSMUSG00000009566.13	ENSMUST00000130164.8	2404	13	-31	1	19	-1	multi-exon	FALSE	canonical	3	298	junction_5	36.3440351211707	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTATTCTCCTAGCTC	NA	False	NA	-15	True	AATAAA	-18	NA	32584178	32572622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.21	chr2	-	2232	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	16	-1	intron_retention	FALSE	canonical	0	0	junction_1	124.973058321074	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTATTCTCCTAGCTC	NA	False	NA	-15	True	AATAAA	-18	NA	32584181	32572622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574765_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.24	chr2	-	3599	13	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	20	-2	intron_retention	FALSE	canonical	3	280	junction_8	43.7937083253849	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTATTCTCCTAGCT	NA	False	NA	-16	True	AATAAA	-17	NA	32584177	32572623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32578047_32581201_32581267_32582462_32582517_32582604
ES.18826.25	chr2	-	3407	12	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-17	-2	intron_retention	FALSE	canonical	2	2	junction_3	110.40616224268	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTATTCTCCTAGCT	NA	False	NA	-16	True	AATAAA	-17	NA	32584164	32572623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575604_32575730_32576898_32577156_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.26	chr2	-	2095	16	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.9580436179599	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTATTCTCCTAGCT	NA	False	NA	-16	True	AATAAA	-17	NA	32584186	32572623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573171_32573334_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.27	chr2	-	3011	13	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	280	junction_6	40.4381386262468	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTATTCTCCTAGCT	NA	False	NA	-16	True	AATAAA	-17	NA	32584160	32572623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.28	chr2	-	2212	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-3	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	99.3749085482829	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTCCTATTCTCCTAG	NA	False	NA	-18	True	AATAAA	-15	NA	32584150	32572625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577532_32577626_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.29	chr2	-	2542	14	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	0	-5	intron_retention	FALSE	canonical	1	7	junction_7	100.817428285757	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584147	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577524_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.3	chr2	-	2455	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	21	1	intron_retention	FALSE	canonical	2	2	junction_3	99.2403030784471	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTCTCCTAGCTCCCT	NA	False	NA	-12	True	AATAAA	-21	NA	32584176	32572619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575604_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.30	chr2	-	2350	14	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	11	-5	intron_retention	FALSE	canonical	3	280	junction_7	39.6084385247243	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584186	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.31	chr2	-	4791	10	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	18	-5	intron_retention	FALSE	canonical	3	280	junction_4	48.4969134820346	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584179	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32575882_32576565_32576656_32576749_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ES.18826.32	chr2	-	2496	13	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	298	junction_5	38.0642731296539	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584150	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.33	chr2	-	2242	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	11	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	100.36049816455	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584186	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575875_32576572_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.34	chr2	-	3275	11	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-23	-5	intron_retention	FALSE	canonical	3	24	junction_7	108.124742774261	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584170	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.35	chr2	-	4361	11	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	280	junction_6	41.629797020884	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584150	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577235_32577424_32577528_32577613_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ES.18826.36	chr2	-	3752	12	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-11	-5	intron_retention	FALSE	canonical	3	24	junction_9	102.35943798915	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584158	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604
ES.18826.37	chr2	-	2436	14	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	21	-5	intron_retention	FALSE	canonical	3	280	junction_7	42.1086225691907	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCTATTCTCCTA	NA	False	NA	-19	True	AATAAA	-14	NA	32584176	32572626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.39	chr2	-	2327	14	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	25	-6	intron_retention	FALSE	canonical	3	298	junction_5	37.0663885449245	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584172	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.40	chr2	-	2881	13	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-17	-6	intron_retention	FALSE	canonical	0	0	junction_3	106.467391982501	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584164	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575601_32575730_32575882_32576565_32576656_32576749_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.41	chr2	-	3789	12	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	20	-6	intron_retention	FALSE	canonical	3	298	junction_5	39.2714646261671	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584177	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ES.18826.42	chr2	-	3159	12	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	24	junction_8	103.533761012635	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584149	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.43	chr2	-	1751	13	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.669661416293	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584196	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573171_32575791_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.44	chr2	-	2385	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-22	-6	intron_retention	FALSE	canonical	0	0	junction_14	99.5056402872701	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584169	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32583853
ES.18826.45	chr2	-	3676	11	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	16	-6	intron_retention	FALSE	canonical	0	0	junction_3	116.317840420118	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGACTCCTATTCTCCT	NA	False	NA	-20	True	AATAAA	-13	NA	32584181	32572627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575601_32575730_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.46	chr2	-	2229	15	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-21	-7	intron_retention	FALSE	canonical	0	0	junction_14	99.5056402872701	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGACTCCTATTCTCC	NA	False	NA	-21	True	AATAAA	-12	NA	32584168	32572628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584007
ES.18826.47	chr2	-	2998	13	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	-24	-7	intron_retention	FALSE	canonical	3	24	junction_9	100.834400820796	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGACTCCTATTCTCC	NA	False	NA	-21	True	AATAAA	-12	NA	32584171	32572628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578028_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.48	chr2	-	1179	4	ISM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	20	7827	20	2015	5prime_fragment	FALSE	canonical	3	378	junction_3	22.86676384819	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCTTTGAGTATGATT	NA	False	NA	NA	False	NA	NA	NA	32584177	32580447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.49	chr2	-	141	1	Intergenic	novelGene_15605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	32584810	32584669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32584700_32584800
ES.18826.5	chr2	-	3376	10	NIC	ENSMUSG00000009566.13	novel	2404	13	NA	NA	-2	1	intron_retention	FALSE	canonical	3	330	junction_2	32.5307072407018	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTCTCCTAGCTCCCT	NA	False	NA	-12	True	AATAAA	-21	NA	32584149	32572619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32576898_32577156_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.50	chr2	-	3202	1	Intergenic	novelGene_15607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGAAAAGACATGAGGGC	NA	False	NA	NA	False	NA	NA	NA	32592882	32589680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32589700_32592900
ES.18826.6	chr2	-	3427	13	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	126	0	intron_retention	FALSE	canonical	3	24	junction_10	100.088155587406	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	False	NA	-13	True	AATAAA	-20	NA	32584021	32572620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32578028_32581201_32581267_32582462_32582517_32582604
ES.18826.7	chr2	-	1677	1	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	1964	False	NA	-14	True	AATAAA	-19	NA	32574298	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32572600_32574300
ES.18826.8	chr2	-	2345	16	NNC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	126.028815047283	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584147	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575480_32575604_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18826.9	chr2	-	3539	11	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	22	0	intron_retention	FALSE	canonical	3	298	junction_3	40.6083735207408	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584175	32572621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32573481_32574761_32574829_32575325_32576656_32576749_32576898_32577156_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ES.18827.1	chr2	-	3857	7	FSM	ENSMUSG00000009555.17_ENSMUSG00000093280.3_ENSMUSG00000105841.3	ENSMUST00000009699.16	1733	7	-452	-1672	-160	18	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCCTGGGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	32603248	32595777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.11	chr2	-	2405	7	Fusion	ENSMUSG00000009555.17_ENSMUSG00000093280.3_ENSMUSG00000105841.3	novel	1733	7	NA	NA	-159	-3	multi-exon	FALSE	canonical	3	9	junction_5	442.212116020757	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32603247	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600804_32602042_32602125_32602576
ES.18827.12	chr2	-	3610	4	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	7	-3	intron_retention	FALSE	canonical	3	1119	junction_2	87.1677820196328	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602789	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599957_32600054_32602125_32602576
ES.18827.14	chr2	-	1632	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	475.512355254835	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602780	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602576
ES.18827.15	chr2	-	1959	5	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1092	junction_3	87.479640488516	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602770	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.16	chr2	-	1786	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	15	-3	intron_retention	FALSE	canonical	3	1063	junction_2	94.5608798605427	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602754	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599628_32599784_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.19	chr2	-	1704	7	NNC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	549.517591468493	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602751	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600235_32600488_32600580_32602042_32602134_32602576
ES.18827.2	chr2	-	3621	5	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	12	18	intron_retention	FALSE	canonical	3	1092	junction_3	87.479640488516	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCCTGGGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	32602757	32595777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.20	chr2	-	1712	7	NNC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	441.818212994138	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602766	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600237_32600488_32600580_32602042_32602125_32602576
ES.18827.21	chr2	-	4863	2	NIC	ENSMUSG00000009555.17	novel	846	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1203	junction_1	0	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602770	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32602125_32602576
ES.18827.22	chr2	-	1798	8	NNC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	534.126981768438	510	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602794	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32601570_32601644_32602042_32602125_32602576
ES.18827.23	chr2	-	2721	4	NIC	ENSMUSG00000009555.17	novel	1565	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	9	junction_3	570.616041368157	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602749	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599628_32599784_32600804_32602042
ES.18827.25	chr2	-	2473	6	NNC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	458.622895198223	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602796	32597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32598670_32599257_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.26	chr2	-	3393	3	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	1092	junction_1	55.5	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAAATGGCTGCGTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	32602765	32597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32600580_32602042_32602125_32602576
ES.18827.27	chr2	-	2980	5	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	1063	junction_1	54.7374414820423	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTAAATGGCTGCGTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	32602776	32597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32599628_32599784_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.3	chr2	-	5339	1	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	8	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602788	32597449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32597400_32602800
ES.18827.4	chr2	-	2250	7	FSM	ENSMUSG00000009555.17_ENSMUSG00000093280.3_ENSMUSG00000105841.3	ENSMUST00000009699.16	1733	7	-520	3	-228	-3	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32603316	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.5	chr2	-	3160	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	6	-3	intron_retention	FALSE	canonical	3	1063	junction_2	90.6898009701201	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602763	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32602125_32602576
ES.18827.6	chr2	-	2099	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	12	-3	intron_retention	FALSE	canonical	3	9	junction_4	482.72327476516	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602784	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600804_32602042_32602125_32602576
ES.18827.7	chr2	-	1621	7	NNC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	446.550357991372	510	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602773	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32598302_32599478_32599542_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.8	chr2	-	2216	6	Fusion	ENSMUSG00000009555.17_ENSMUSG00000093280.3_ENSMUSG00000105841.3	novel	1733	7	NA	NA	-37	-3	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32603125	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18827.9	chr2	-	2882	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	1063	junction_1	49.1137455301466	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGCGTTTCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32602771	32597452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ES.18828.1	chr2	-	189	1	Intergenic	novelGene_15608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAATTAAAGTTACAGA	NA	False	NA	NA	False	NA	NA	NA	32606322	32606133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32606100_32606300
ES.18829.1	chr2	-	209	1	Intergenic	novelGene_15609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTAGTCATGTTGGCCC	NA	False	NA	NA	False	AAGAAA	-10	NA	32617024	32616815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32616800_32617000
ES.1883.1	chr1	+	3699	9	FSM	ENSMUSG00000006403.14	ENSMUST00000219033.2	4386	9	-1	688	1	-688	multi-exon	FALSE	canonical	1	1	junction_1	2.3418742493994	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTCCTGTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	171077990	171087517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171079039_171080105_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
ES.1883.2	chr1	+	3646	9	NNC	ENSMUSG00000006403.14	novel	4389	9	NA	NA	1	-716	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.66634112596269	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCAGTAGGTGCTCAAG	NA	False	NA	NA	False	NA	NA	NA	171077992	171087489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171079039_171080105_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084546_171084700_171085287_171085464_171086320
ES.1883.3	chr1	+	2782	8	NNC	ENSMUSG00000006403.14	novel	3761	8	NA	NA	255	-717	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.47435829652697	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCAGTAGGTGCTCAA	NA	False	NA	NA	False	NA	NA	NA	171079939	171087488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171080430_171080655_171080789_171081461_171081627_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
ES.1883.4	chr1	+	3018	8	FSM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	291	452	291	-451	multi-exon	FALSE	canonical	2	2	junction_1	2.0995626366713	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGTCAACAAGAACATG	NA	False	NA	NA	False	AATAAA	-11	NA	171079975	171087754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
ES.1883.5	chr1	+	160	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAGAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	171082799	171082959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171082800_171083000
ES.1883.6	chr1	+	3682	3	ISM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	4988	-1593	4988	1593	3prime_fragment	FALSE	canonical	2	5	junction_1	1	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAGAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	171084672	171089799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171084700_171085287_171085464_171086320
ES.1883.7	chr1	+	219	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGCTAGAGAGATGCT	NA	False	NA	NA	False	NA	NA	NA	171089369	171089588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171089400_171089600
ES.18830.1	chr2	+	2657	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	-67	517	-67	1	multi-exon	FALSE	canonical	1	2	junction_6	3.98622628559895	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCCCATGAGGCCTT	1478	False	NA	NA	False	AATAAA	-16	NA	32617650	32645007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
ES.18830.2	chr2	+	2727	12	NIC	ENSMUSG00000059013.13	novel	3107	11	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.97763593527412	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCCCATGAGGCCTT	1542	False	NA	NA	False	AATAAA	-16	NA	32617714	32645007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32617819_32622803_32622938_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
ES.18830.3	chr2	+	246	1	Intergenic	novelGene_15610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTTGGGAG	408	False	NA	NA	False	NA	NA	NA	32628848	32629094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32628800_32629100
ES.18831.1	chr2	+	1545	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	-4	-5	-4	5	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGTTTCTTACTGTCC	585	False	NA	14	True	AATAAA	-25	NA	32647241	32652261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ES.18831.2	chr2	+	4222	2	FSM	ENSMUSG00000009563.17	ENSMUST00000149987.2	716	2	-3051	-455	-1	0	multi-exon	FALSE	canonical	3	233	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	599	False	NA	9	True	AATAAA	-20	NA	32647255	32652256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32650729_32651507
ES.18831.3	chr2	+	2743	4	FSM	ENSMUSG00000009563.17	ENSMUST00000149720.3	2712	4	-31	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	10.6562449087639	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	600	False	NA	7	True	AATAAA	-18	NA	32647256	32652254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32648949_32649538_32649715_32650600_32650729_32651507
ES.18831.4	chr2	+	3629	3	NIC	ENSMUSG00000009563.17	novel	2712	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_2	12.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	600	False	NA	7	True	AATAAA	-18	NA	32647256	32652254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32648949_32649538_32650729_32651507
ES.18831.5	chr2	+	2870	4	NNC	ENSMUSG00000009563.17	novel	1536	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	5	junction_1	108.921990433521	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	601	False	NA	9	True	AATAAA	-20	NA	32647257	32652256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32648949_32649412_32649715_32650600_32650729_32651507
ES.18831.6	chr2	+	1434	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	-7	-512	3	0	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	603	False	NA	7	True	AATAAA	-18	NA	32647259	32652254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
ES.18832.1	chr2	-	2110	6	ISM	ENSMUSG00000039021.16	ENSMUST00000066478.9	2979	15	5722	4	5713	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCCCATGTAGTAGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	32659629	32652192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32653018_32654904_32654981_32657189_32657314_32657484_32657628_32657948_32658115_32658853
ES.18833.1	chr2	+	1158	4	FSM	ENSMUSG00000053746.9	ENSMUST00000138214.2	908	4	-105	-145	-26	-3	multi-exon	FALSE	canonical	3	42	junction_3	3.85861230093008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGAAGCTTCCTGTGG	8165	False	NA	3	True	ATTAAA	-13	NA	32665771	32667606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32665908_32666315_32666819_32666994_32667041_32667133
ES.18833.2	chr2	+	960	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	-11	3	-11	-3	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGAAGCTTCCTGTGG	8180	False	NA	3	True	ATTAAA	-13	NA	32665786	32667606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ES.18833.3	chr2	+	1980	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	9	-1037	9	1037	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTTGAATGGAATCTT	8200	False	NA	NA	False	NA	NA	NA	32665806	32668646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ES.18833.4	chr2	+	2063	5	NNC	ENSMUSG00000053746.9	novel	952	5	NA	NA	-1	1051	intron_retention	FALSE	canonical	2	4	junction_3	18.6061145863396	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCTGTTCTTCCTTTG	8220	False	NA	NA	False	NA	NA	NA	32665826	32668660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32665908_32666315_32666536_32666718_32666819_32666905_32667041_32667133
ES.18834.1	chr2	+	158	1	Intergenic	novelGene_15611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	32697204	32697362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32697200_32697400
ES.18835.1	chr2	-	3938	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-49	3	-49	2	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGAAGAGCTTCTTTT	5100	False	NA	NA	False	AATAAA	-20	NA	32737306	32677616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.10	chr2	-	2337	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-19	1574	-19	-1215	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTTGGATTCATTT	5130	False	NA	NA	False	NA	NA	NA	32737276	32679187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.11	chr2	-	2171	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-37	1758	-37	-1399	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAGCATCTTCTGTA	5112	False	NA	NA	False	NA	NA	NA	32737294	32679371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.12	chr2	-	1942	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	18	1932	18	-1573	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCTCCCTTCCCAAAA	5167	False	NA	NA	False	AAGAAA	-33	NA	32737239	32679545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.13	chr2	-	3708	4	NIC	ENSMUSG00000026797.17	novel	3892	19	NA	NA	2	29	intron_retention	FALSE	canonical	3	30	junction_1	3.29983164553722	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAGAA	5190	False	NA	NA	False	NA	NA	NA	32737216	32706496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.14	chr2	-	211	1	Intergenic	novelGene_15612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAATCTTTATGGAGA	NA	False	NA	NA	False	NA	NA	NA	32743905	32743694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32743700_32743900
ES.18835.15	chr2	-	164	1	Intergenic	novelGene_15613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32745234	32745070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32745100_32745200
ES.18835.2	chr2	-	3607	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-51	336	-51	23	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGTTTGACTTTGAG	5098	False	NA	0	True	AATAAA	-38	NA	32737308	32677949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.3	chr2	-	3887	1	NIC	ENSMUSG00000026797.17	novel	3892	19	NA	NA	25346	3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTGGGCCCACTGC	NA	False	NA	-20	True	AATAAA	-18	NA	32681856	32677969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32678000_32681900
ES.18835.4	chr2	-	4308	19	NNC	ENSMUSG00000026797.17	novel	3892	19	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.96103519832262	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGGTGCCTGGGCCCA	5109	False	NA	-24	True	AATAAA	-14	NA	32737297	32677973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32697535_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.6	chr2	-	3499	20	NNC	ENSMUSG00000026797.17	novel	3616	20	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.2756881996743	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGGTGCCTGGGCC	5225	False	NA	-26	True	AATAAA	-12	NA	32737181	32677975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713138_32713184_32713547_32713598_32737066
ES.18835.7	chr2	-	3580	19	NNC	ENSMUSG00000026797.17	novel	3892	19	NA	NA	-13621	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	10.040196987886	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGGTGCCTGGGCC	NA	False	NA	-26	True	AATAAA	-12	NA	32750878	32677975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32750637
ES.18835.8	chr2	-	3453	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	-31	470	-31	-111	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGAAACTCTTGAAT	5118	False	NA	-134	True	AAAAAG	-21	NA	32737288	32678083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18835.9	chr2	-	3549	20	FSM	ENSMUSG00000026797.17	ENSMUST00000077458.7	3616	20	-80	147	-37	-147	multi-exon	FALSE	canonical	2	2	junction_1	11.5751189843295	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATTTAAAAAAAAGCTAG	5112	False	NA	NA	False	TATAAA	-15	NA	32737294	32678119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32679650_32684599_32684726_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ES.18836.1	chr2	-	174	1	Intergenic	novelGene_15614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	32757228	32757054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32757100_32757200
ES.18837.1	chr2	+	3717	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	-3	0	-3	0	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8854	False	NA	19	True	AATAAA	-19	NA	32766122	32815266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.10	chr2	+	3262	13	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.562651709288	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCATGTGCTGCTGG	8909	False	NA	18	True	AATAAA	-18	NA	32766177	32815265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812943_32813696
ES.18837.11	chr2	+	5243	11	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	64	-8	intron_retention	FALSE	canonical	3	292	junction_9	28.9518565898631	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8921	False	NA	11	True	AATAAA	-11	NA	32766189	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32811153_32812080_32812976_32813058_32813171_32813442
ES.18837.12	chr2	+	712	6	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	64	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	149.404953063812	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8921	False	NA	11	True	AATAAA	-11	NA	32766189	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802523_32815230
ES.18837.14	chr2	+	3622	14	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	69	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.954878787558	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTCCTCATGTGCTG	8926	False	NA	14	True	AATAAA	-14	NA	32766194	32815261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802449_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.15	chr2	+	3634	14	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	70	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	97.6732870641567	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTCATGTGCTGCT	8927	False	NA	16	True	AATAAA	-16	NA	32766195	32815263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812969_32813058_32813171_32813442
ES.18837.16	chr2	+	3531	13	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	70	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	100.654076199405	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTCCTCATGTGCTG	8927	False	NA	14	True	AATAAA	-14	NA	32766195	32815261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32813058_32813171_32813442
ES.18837.17	chr2	+	3708	15	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	70	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	123.694158705895	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTCCTCATGTGCTG	8927	False	NA	14	True	AATAAA	-14	NA	32766195	32815261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32785670_32785740_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.18	chr2	+	1691	2	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	71	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8928	False	NA	11	True	AATAAA	-11	NA	32766196	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766258_32813628
ES.18837.19	chr2	+	3597	14	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	72	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.8901691034426	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTCATGTGCTGCT	8929	False	NA	16	True	AATAAA	-16	NA	32766197	32815263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799948_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.20	chr2	+	3494	13	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	80	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	98.9299696193671	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTCATTTCCTCATGT	8937	False	NA	10	True	AATAAA	-10	NA	32766205	32815257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.22	chr2	+	3082	15	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	82	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	94.5528682693401	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8939	False	NA	11	True	AATAAA	-11	NA	32766207	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442_32813853_32814394
ES.18837.23	chr2	+	3609	14	NNC	ENSMUSG00000026796.17	novel	707	2	NA	NA	-844	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.1252265099939	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8953	False	NA	11	True	AATAAA	-11	NA	32784799	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32784994_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.24	chr2	+	3857	11	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	34533	0	-261	0	3prime_fragment	FALSE	canonical	3	292	junction_9	30.1104632976645	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	NA	False	NA	19	True	AATAAA	-19	NA	32800658	32815266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.25	chr2	+	5421	9	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	40344	3	1747	-3	3prime_fragment	FALSE	canonical	3	292	junction_7	30.3662538848637	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTCATGTGCTGCT	NA	False	NA	16	True	AATAAA	-16	NA	32806469	32815263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.26	chr2	+	1821	1	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	1784	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	NA	False	NA	11	True	AATAAA	-11	NA	32813437	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32813400_32815300
ES.18837.3	chr2	+	3785	13	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	28	-3	intron_retention	FALSE	canonical	3	292	junction_11	31.2138680005467	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTCATGTGCTGCT	8885	False	NA	16	True	AATAAA	-16	NA	32766153	32815263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.4	chr2	+	4064	13	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	29	-8	intron_retention	FALSE	canonical	3	292	junction_11	29.6811762270673	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8886	False	NA	11	True	AATAAA	-11	NA	32766154	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.5	chr2	+	905	6	NNC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	36	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	149.404953063812	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	8893	False	NA	11	True	AATAAA	-11	NA	32766161	32815258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802551_32815093
ES.18837.6	chr2	+	4009	13	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	37	-1	intron_retention	FALSE	canonical	3	292	junction_11	30.2079597678051	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCATGTGCTGCTGG	8894	False	NA	18	True	AATAAA	-18	NA	32766162	32815265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812687_32812867_32812976_32813058_32813171_32813442
ES.18837.8	chr2	+	3410	12	NIC	ENSMUSG00000026796.17	novel	3714	14	NA	NA	44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	102.810344528889	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8901	False	NA	19	True	AATAAA	-19	NA	32766169	32815266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32766417_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ES.18838.1	chr2	+	953	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	-164	453	-164	0	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5477	False	NA	22	True	AATAAA	-21	NA	32851406	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ES.18838.10	chr2	+	545	6	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	2444.52437909709	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGGCTTGGCTGCTTTT	5797	False	NA	21	True	AATAAA	-20	NA	32851726	32854054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853752_32853866_32854002
ES.18838.11	chr2	+	2003	2	FSM	ENSMUSG00000065124.3_ENSMUSG00000038900.18	ENSMUST00000144644.2	489	2	-545	-969	1	-8	multi-exon	FALSE	canonical	3	6523	junction_1	0	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTGAATGGGCTTGGC	5803	False	NA	14	True	AATAAA	-13	NA	32851732	32854047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32852685_32852996
ES.18838.12	chr2	+	1953	3	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	5241	junction_1	655	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAATGGGCTTGGCTGCT	5803	False	NA	18	True	AATAAA	-17	NA	32851732	32854051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851852_32852060_32853596_32853752
ES.18838.13	chr2	+	1206	5	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	1	-8	intron_retention	FALSE	canonical	3	2580	junction_4	1523.82780769351	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGTGAATGGGCTTGGC	5803	False	NA	14	True	AATAAA	-13	NA	32851732	32854047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853866_32854002
ES.18838.14	chr2	+	646	6	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_4	2753.40390062918	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5818	False	NA	22	True	AATAAA	-21	NA	32851747	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853752_32853866_32854002
ES.18838.15	chr2	+	3621	1	FSM	ENSMUSG00000065124.3	ENSMUST00000083190.3	130	1	-1545	-1946	-1545	1946	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACCGGGCGTGAATTAAA	5828	False	NA	NA	False	NA	NA	NA	32851757	32855378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32851800_32855400
ES.18838.16	chr2	+	1247	5	NIC	ENSMUSG00000038900.18	novel	729	7	NA	NA	69	0	intron_retention	FALSE	canonical	3	310	junction_1	2554.7315416693	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5891	False	NA	22	True	AATAAA	-21	NA	32851820	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853866_32854002
ES.18838.17	chr2	+	466	3	ISM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	1544	0	1018	0	3prime_fragment	FALSE	canonical	3	2580	junction_2	1985.5	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	7366	False	NA	22	True	AATAAA	-21	NA	32853295	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_32853596_32853752_32853866_32854002
ES.18838.2	chr2	+	1473	4	FSM	ENSMUSG00000038900.18	ENSMUST00000154340.8	1417	4	-58	2	-49	0	multi-exon	FALSE	canonical	3	2580	junction_3	1756.95310757636	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5753	False	NA	22	True	AATAAA	-21	NA	32851682	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32852135_32852585_32852685_32852996_32853866_32854002
ES.18838.3	chr2	+	2370	1	FSM	ENSMUSG00000065124.3	ENSMUST00000083190.3	130	1	-1619	-621	-1619	621	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGGCTTGGCTGCTTT	5754	False	NA	20	True	AATAAA	-19	NA	32851683	32854053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32851700_32854100
ES.18838.4	chr2	+	1223	5	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	-28	0	intron_retention	FALSE	canonical	3	5241	junction_1	529.819780680186	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5774	False	NA	22	True	AATAAA	-21	NA	32851703	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853596_32853752
ES.18838.6	chr2	+	756	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	-27	0	-7	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5795	False	NA	22	True	AATAAA	-21	NA	32851724	32854055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ES.18838.8	chr2	+	1080	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	155	7	-6	-7	multi-exon	FALSE	canonical	3	2580	junction_6	1457.06650690885	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGTGCAATTGTTGG	5796	False	NA	17	True	AATAAA	-18	NA	32851725	32854501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ES.18838.9	chr2	+	1566	3	FSM	ENSMUSG00000038900.18	ENSMUST00000134912.7	2863	3	-6	1303	-6	-1	multi-exon	FALSE	canonical	3	6045	junction_1	239	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGGCTTGGCTGCTTTT	5796	False	NA	21	True	AATAAA	-20	NA	32851725	32854054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_32852135_32852585_32852685_32852996
ES.18839.1	chr2	-	285	1	Intergenic	novelGene_15615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCATTTTTTTAAAAAAAAT	3314	False	NA	NA	False	NA	NA	NA	32772323	32772038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32772000_32772300
ES.1884.1	chr1	-	3184	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	-1562	1	-1562	-1	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTAATGTGTCTTTCT	NA	False	NA	-2	True	ATTAAA	-27	NA	171076253	171062422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.11	chr1	-	2524	11	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	1142	junction_10	113.139559836513	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074702	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.12	chr1	-	1959	11	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	21	-7	intron_retention	FALSE	canonical	3	1142	junction_10	115.828364401817	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074670	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.13	chr1	-	5869	5	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	22	-7	intron_retention	FALSE	canonical	3	1142	junction_4	154.026783385228	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074669	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171064271_171064708_171068707_171073659_171073767_171074562
ES.1884.14	chr1	-	4679	7	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	21	-7	intron_retention	FALSE	canonical	3	1142	junction_6	136.540185374937	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074670	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171068707_171073659_171073767_171074562
ES.1884.15	chr1	-	5446	10	NIC	ENSMUSG00000013593.13	novel	1545	12	NA	NA	-1561	-8	intron_retention	FALSE	canonical	1	10	junction_7	453.250183006098	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171076252	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066278_171066467_171066842_171068707_171073659
ES.1884.16	chr1	-	1626	14	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	-322	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	511.987448995573	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171079279	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171078786_171078834_171079186
ES.1884.17	chr1	-	2008	13	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	-322	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	529.68009213109	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171079279	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065663_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171078786
ES.1884.18	chr1	-	4188	9	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	18	-8	intron_retention	FALSE	canonical	3	1142	junction_8	119.088989835333	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171074673	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171066162_171066278_171066467_171066842_171068707_171073659_171073767_171074562
ES.1884.19	chr1	-	1563	13	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	400.188800928873	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171074693	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066910_171068515_171068707_171073659_171073767_171074562
ES.1884.22	chr1	-	1746	14	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	-978	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	511.627892703003	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCAGCTTGTAATGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	171079935	171062429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171078786_171078962_171079850
ES.1884.3	chr1	-	2437	10	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	10	junction_5	453.612414096244	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074693	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171065942_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.4	chr1	-	1514	12	FSM	ENSMUSG00000013593.13	ENSMUST00000111318.8	1545	12	24	7	24	-7	multi-exon	FALSE	canonical	1	10	junction_7	412.075336127544	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074667	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.6	chr1	-	3521	10	NIC	ENSMUSG00000013593.13	novel	1845	12	NA	NA	18	-7	intron_retention	FALSE	canonical	3	1142	junction_9	119.113391354625	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074673	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171062657_171062841_171064010_171064174_171064271_171064708_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ES.1884.7	chr1	-	7303	2	NIC	ENSMUSG00000013593.13	novel	714	6	NA	NA	7	-7	intron_retention	FALSE	canonical	3	1401	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074684	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171068707_171073659
ES.1884.9	chr1	-	1604	13	NNC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	396.455090633087	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	False	NA	-8	True	ATTAAA	-21	NA	171074681	171062428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073765_171074562
ES.18840.1	chr2	-	187	1	Intergenic	novelGene_15616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTCAAAAGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32800273	32800086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32800100_32800300
ES.18841.10	chr2	-	4809	25	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	3	junction_24	6.12358260243862	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTACACAGTTTGCATA	NA	False	NA	-7	True	AATAAA	-19	NA	32851644	32815233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32816914_32817996_32818143_32818663_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851191_32851573
ES.18841.12	chr2	-	4011	26	NNC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.6332495807108	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTACACAGTTTGCATA	NA	False	NA	-7	True	AATAAA	-19	NA	32851657	32815233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823875_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ES.18841.14	chr2	-	3962	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	8.1338797630651	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTACACAGTTTGCA	NA	False	NA	-9	True	AATAAA	-17	NA	32851634	32815235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830247_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851191_32851573
ES.18841.15	chr2	-	4038	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	3	junction_25	6.16389487256231	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGCTTACACAGTTTG	NA	False	NA	-11	True	AATAAA	-15	NA	32851618	32815237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851551
ES.18841.16	chr2	-	4123	27	NNC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.28772529301885	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGCTTACACAGTTTG	NA	False	NA	-11	True	AATAAA	-15	NA	32851615	32815237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849167_32849278_32849528_32849626_32851055_32851268_32851573
ES.18841.17	chr2	-	4038	26	NIC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	7.82304288624318	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAAGCTTACACAGTTT	NA	False	NA	-12	True	AATAAA	-14	NA	32851610	32815238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32850947_32851191_32851573
ES.18841.18	chr2	-	172	1	Intergenic	novelGene_15617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2514	False	NA	NA	False	NA	NA	NA	32826893	32826721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32826700_32826900
ES.18841.2	chr2	-	4047	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	-13	-4	-13	0	multi-exon	FALSE	canonical	3	22	junction_16	3.74165738677394	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32851639	32815227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ES.18841.3	chr2	-	4075	26	NNC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.61513416341649	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32851615	32815227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835646_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ES.18841.4	chr2	-	2681	11	NNC	ENSMUSG00000026792.17	novel	3981	25	NA	NA	1159	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	8.40238061504	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32830682	32815227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32830586
ES.18841.5	chr2	-	3839	9	ISM	ENSMUSG00000026792.17	ENSMUST00000028132.14	3981	25	21017	0	-1439	0	3prime_fragment	TRUE	canonical	3	25	junction_4	2.8613807855649	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32830250	32815227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808
ES.18841.7	chr2	-	3998	26	NNC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	102	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	7.9401763204604	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTTTGCATAGATTC	NA	False	NA	-2	True	AATAAA	-24	NA	32851161	32815228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32850259_32850384_32851055
ES.18841.8	chr2	-	3984	26	NNC	ENSMUSG00000026792.17	novel	4030	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.56853103821547	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACACAGTTTGCATAGA	NA	False	NA	-5	True	AATAAA	-21	NA	32851612	32815231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837902_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ES.18841.9	chr2	-	5227	15	NNC	ENSMUSG00000026792.17	novel	3981	25	NA	NA	8776	-2	intron_retention	FALSE	canonical	0	0	junction_7	10.3591131130901	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTACACAGTTTGCATA	6138	False	NA	-7	True	AATAAA	-19	NA	32841142	32815233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32816914_32817996_32818143_32818663_32819718_32822102_32822202_32823826_32825261_32826447_32826523_32828808_32828897_32830247_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837902_32841104
ES.18842.1	chr2	+	1634	1	Intergenic	novelGene_15618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAGAGCAATTGGGGGA	NA	False	NA	NA	False	NA	NA	NA	32859610	32861244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32859600_32861200
ES.18843.1	chr2	+	2695	1	Antisense	novelGene_ENSMUSG00000026791.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTCTTCAGCCCACGA	NA	False	NA	NA	False	AATAAA	-16	NA	32861905	32864600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_32861900_32864600
ES.18843.2	chr2	+	166	1	Intergenic	novelGene_15619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32862274	32862440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32862300_32862400
ES.18844.1	chr2	-	3466	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	58	-1416	-5	1416	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACCGGTCAGGATT	4008	False	NA	NA	False	NA	NA	NA	32872036	32861585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.11	chr2	-	2571	7	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	13	2	intron_retention	FALSE	canonical	2	3	junction_5	67.6496283967785	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGTGGAGCCAGAAG	3977	False	NA	-11	True	AATAAA	-17	NA	32872067	32862999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32866041_32866148_32866293_32866872_32867073_32871372_32871896_32871969
ES.18844.12	chr2	-	1873	8	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	82.0860673255796	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTCAGTGGAGCCAGAA	3977	False	NA	-12	True	AATAAA	-16	NA	32872067	32863000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32866148_32866293_32866872_32867073_32871372_32871580_32871732_32871896_32871969
ES.18844.13	chr2	-	2003	10	NNC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.7841918534062	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3977	False	NA	-13	True	AATAAA	-15	NA	32872067	32863001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866215_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.14	chr2	-	2006	10	NNC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	57.0206806754476	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3992	False	NA	-13	True	AATAAA	-15	NA	32872052	32863001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871836_32871969
ES.18844.15	chr2	-	1574	7	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	68.1754273099105	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTTCAGTGGAGCCAG	3976	False	NA	-14	True	AATAAA	-14	NA	32872068	32863002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32871732_32871896_32871969
ES.18844.2	chr2	-	3365	10	NNC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	14	1366	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	55.8509922323081	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3978	False	NA	NA	False	NA	NA	NA	32872066	32861635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866212_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.3	chr2	-	2219	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	-98	-13	-97	13	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAAGTCTTTTGCAGG	3852	False	NA	0	True	AATAAA	-28	NA	32872192	32862988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.4	chr2	-	1981	9	FSM	ENSMUSG00000026791.15	ENSMUST00000193695.2	1339	9	-34	-608	17	13	multi-exon	FALSE	canonical	2	6	junction_3	58.5742050735646	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAAGTCTTTTGCAGG	3981	False	NA	0	True	AATAAA	-28	NA	32872063	32862988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.5	chr2	-	2930	7	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	-117	8	intron_retention	FALSE	canonical	3	169	junction_5	8.47381587925744	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGCCAGAAGTCTTTT	3832	False	NA	-5	True	AATAAA	-23	NA	32872212	32862993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
ES.18844.6	chr2	-	2653	8	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	4	6	intron_retention	FALSE	canonical	3	169	junction_5	7.85064666516233	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGAGCCAGAAGTCTT	3954	False	NA	-7	True	AATAAA	-21	NA	32872090	32862995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ES.18844.8	chr2	-	2236	9	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	13	2	intron_retention	FALSE	canonical	3	167	junction_4	8.8175960442742	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGTGGAGCCAGAAG	3977	False	NA	-11	True	AATAAA	-17	NA	32872067	32862999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
ES.18844.9	chr2	-	7560	4	NIC	ENSMUSG00000026791.15	novel	1339	9	NA	NA	12	2	intron_retention	FALSE	canonical	3	181	junction_3	4.78423336480244	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGTGGAGCCAGAAG	3976	False	NA	-11	True	AATAAA	-17	NA	32872068	32862999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32863745_32864849_32864996_32865325_32871896_32871969
ES.18845.1	chr2	+	1349	1	Intergenic	novelGene_15622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAGTCTACTCCAGACAC	1444	False	NA	NA	False	NA	NA	NA	32963184	32964533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_32963200_32964500
ES.18846.1	chr2	-	178	2	Genic_Genomic	ENSMUSG00000104277.2	novel	3789	1	NA	NA	2489	15070	multi-exon	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	32889838	32873468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_32873587_32889778
ES.18846.10	chr2	-	3667	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-29	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_29	24.5422298573981	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGTTACTGCCTGTT	NA	False	NA	NA	False	TATAAA	-15	NA	33021695	32876238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021602
ES.18846.13	chr2	-	3659	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-39	8	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCCTTCTCATATTTTA	NA	False	NA	-2	True	AATAAA	-26	NA	33020659	32876377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.14	chr2	-	4545	29	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	7	7	intron_retention	FALSE	canonical	2	13	junction_28	23.6361665112374	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACCCTTCTCATATTTT	NA	False	NA	-3	True	AATAAA	-25	NA	33020613	32876378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995031_33020435
ES.18846.15	chr2	-	3687	30	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.4152159000988	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	-8	True	AATAAA	-20	NA	33020620	32876383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897182_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995031_33020435
ES.18846.16	chr2	-	3515	28	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	32.1145497753002	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCAACCCTTCTCAT	NA	False	NA	-8	True	AATAAA	-20	NA	33020631	32876383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897329_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924816_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995036_33020435
ES.18846.18	chr2	-	2785	1	NIC	ENSMUSG00000038860.16	novel	3578	29	NA	NA	19171	1	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGCAACCCTTCTCA	NA	False	NA	-9	True	AATAAA	-19	NA	32879169	32876384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876400_32879200
ES.18846.2	chr2	-	3674	29	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	19	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_27	23.6009285099255	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTACTGCCTGTTCACT	NA	False	NA	NA	False	TATAAA	-19	NA	33020601	32876234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995036_33020435
ES.18846.22	chr2	-	3440	30	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-45	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	29.3566368717288	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGCAACCCTTCTCA	NA	False	NA	-9	True	AATAAA	-19	NA	33021711	32876384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892842_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995031_33021678
ES.18846.27	chr2	-	3442	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.6572955171937	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33020620	32876385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876609_32876778_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.28	chr2	-	3518	29	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	24.9498476540275	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33020625	32876385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.3	chr2	-	3767	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTACTGCCTGTTCA	NA	False	NA	NA	False	TATAAA	-17	NA	33020626	32876236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.30	chr2	-	3619	30	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	29.1198270630294	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTCTGCAACCCTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	33020640	32876386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892842_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901407_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.32	chr2	-	3272	27	NIC	ENSMUSG00000038860.16	novel	3678	28	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	30.004166377355	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTCTGCAACCCTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	33020621	32876386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_33020435
ES.18846.33	chr2	-	6093	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	8	junction_26	23.7788738642026	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTCTGCAACCCTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	33020627	32876386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995036_33020435
ES.18846.36	chr2	-	3580	29	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-159	-3887	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	29.2001144462392	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTTTAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	33020779	32880272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.37	chr2	-	3087	25	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-41	-3887	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	30.2916093534533	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTTTAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	33020661	32880272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32954015_32954091_32994860_32995036_33020435
ES.18846.38	chr2	-	3370	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-39	-3887	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	18.5239251366749	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTTTAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	33020659	32880272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.39	chr2	-	3158	28	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-29	-3887	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	25.1577737537906	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTTTAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	33021695	32880272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995031_33021678
ES.18846.4	chr2	-	3877	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	29.0604924635186	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTACTGCCTGTTCA	NA	False	NA	NA	False	TATAAA	-17	NA	33020627	32876236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995031_33020125_33020240_33020435
ES.18846.40	chr2	-	3235	27	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	6	-3902	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	24.4887366936735	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAATGACA	NA	False	NA	NA	False	NA	NA	NA	33020614	32880287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32975886_32975957_32994864_32995036_33020435
ES.18846.41	chr2	-	176	1	Intergenic	novelGene_15620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAATAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32886487	32886311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32886300_32886500
ES.18846.42	chr2	-	186	1	FSM	ENSMUSG00000104277.2	ENSMUST00000193214.2	3789	1	2486	1117	2486	-1117	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACATTGCAGATGTAAT	NA	False	NA	0	True	NA	NA	NA	32889841	32889655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_32889700_32889800
ES.18846.43	chr2	-	3284	4	ISM	ENSMUSG00000038860.16	ENSMUST00000049618.9	3678	28	78496	14599	458	3659	intron_retention	FALSE	canonical	3	81	junction_2	4.98887651569859	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAACAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	32897882	32890984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32892858_32893795_32893955_32895060_32895240_32896809
ES.18846.44	chr2	-	2681	12	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	28	-5251	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	40.2073140009819	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGAGGTTTTTAAAAGT	NA	False	NA	NA	False	AATAAA	-33	NA	33020592	32914571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995031_33020435
ES.18846.45	chr2	-	2339	14	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-6	-5796	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	46.9689561331385	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACACTGAAGGCCTGGGC	NA	False	NA	NA	False	TATAAA	-27	NA	33020626	32915116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994860_32995036_33020435
ES.18846.46	chr2	-	2188	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	5	-5842	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGACGTCAACTATAAA	NA	False	NA	NA	False	AATGAA	-33	NA	33020615	32915162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.48	chr2	-	1726	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-32	-6341	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	11.9953694769644	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTATGTGAGTTCAC	NA	False	NA	NA	False	NA	NA	NA	33020652	32915661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.49	chr2	-	1450	13	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-321	-6466	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	32.6125188982527	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTGTGTCCCACCTG	NA	False	NA	NA	False	NA	NA	NA	33021987	32915786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021921
ES.18846.5	chr2	-	3806	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	28.3486429226437	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTACTGCCTGTTCA	NA	False	NA	NA	False	TATAAA	-17	NA	33020575	32876236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.50	chr2	-	1477	13	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-31	-6468	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	32.355662392986	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGGGTGTGTCCCACC	NA	False	NA	NA	False	NA	NA	NA	33021697	32915788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021602
ES.18846.51	chr2	-	464	4	ISM	ENSMUSG00000038860.16	ENSMUST00000193171.2	694	8	43	10748	43	-6651	5prime_fragment	FALSE	canonical	3	93	junction_3	13.0979218029257	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTGCTGCGTGTTTCT	5039	False	NA	NA	False	NA	NA	NA	32924753	32915971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32916201_32921081_32921186_32924042_32924142_32924721
ES.18846.52	chr2	-	6273	1	NIC	ENSMUSG00000038860.16	novel	3578	29	NA	NA	1518	-7685	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTACTTGGTTTCTTA	6514	False	NA	NA	False	NA	NA	NA	32923278	32917005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32917000_32923300
ES.18846.53	chr2	-	5167	11	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	-6	-7685	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	32.7713289324678	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTACTTGGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33020626	32917005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995036_33020435
ES.18846.54	chr2	-	7322	6	ISM	ENSMUSG00000038860.16	ENSMUST00000139778.8	3878	18	55569	18066	-14675	-7685	internal_fragment	FALSE	canonical	3	93	junction_2	12.2702893201424	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTACTTGGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	32939471	32917005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595
ES.18846.55	chr2	-	5147	2	ISM	ENSMUSG00000038860.16	ENSMUST00000193171.2	694	8	-243	11812	-243	-7715	intron_retention	FALSE	canonical	3	125	junction_1	0	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4753	False	NA	NA	False	NA	NA	NA	32925039	32917035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_32921186_32924042
ES.18846.56	chr2	-	5197	12	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	8	-7715	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	33.3640079246092	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33020612	32917035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994860_32995036_33020435
ES.18846.57	chr2	-	1487	12	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	8	-11421	combination_of_known_junctions	FALSE	canonical	3	92	junction_10	12.5283150377834	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCATGTTGTTTCAAGA	NA	False	NA	NA	False	NA	NA	NA	33020612	32920741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
ES.18846.58	chr2	-	5085	1	Intergenic	novelGene_15621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCTTGTTAACACT	NA	False	NA	NA	False	NA	NA	NA	32930052	32924967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_32925000_32930100
ES.18846.6	chr2	-	3721	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	34.7626236063966	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTACTGCCTGTTCA	NA	False	NA	NA	False	TATAAA	-17	NA	33021661	32876236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882270_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021602
ES.18846.7	chr2	-	3785	29	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.0991230319168	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTTACTGCCTGTTC	NA	False	NA	NA	False	TATAAA	-16	NA	33020619	32876237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892842_32893795_32893930_32895060_32895240_32896809_32896927_32897260_32897497_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32994864_32995036_33020435
ES.18846.8	chr2	-	3873	31	NNC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.3611368595525	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGTTACTGCCTGTT	NA	False	NA	NA	False	TATAAA	-15	NA	33020600	32876238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897220_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32918260_32918351_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994860_32995036_33020435
ES.18847.1	chr2	+	194	1	Intergenic	novelGene_15623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCTCTTTTTAGAGG	NA	False	NA	NA	False	NA	NA	NA	33042051	33042245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33042100_33042200
ES.18848.1	chr2	+	2082	3	NNC	ENSMUSG00000085087.2	novel	410	2	NA	NA	-10	3110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATACA	-43	NA	33067903	33075003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_33068011_33071580_33071959_33073406
ES.18849.1	chr2	+	3455	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	-113	-3	-113	3	multi-exon	FALSE	canonical	1	1	junction_3	1.11803398874989	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACACTGTGTGCTGCTC	NA	False	NA	NA	False	AATAAA	-24	NA	33105967	33137732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ES.1885.1	chr1	+	214	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	171092298	171092512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171092300_171092500
ES.1885.2	chr1	+	158	2	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	171092300	171095934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171092446_171095921
ES.1885.3	chr1	+	182	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	171095771	171095953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171095800_171096000
ES.18850.1	chr2	+	9063	1	Intergenic	novelGene_15625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCCACACCAAAAAAAAAAAA	9174	False	NA	NA	False	NA	NA	NA	33140068	33149131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33140100_33149100
ES.18851.1	chr2	+	154	1	Intergenic	novelGene_15626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCGAGTAGAGAC	NA	False	NA	NA	False	NA	NA	NA	33154891	33155045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33154900_33155000
ES.18852.1	chr2	+	9586	1	Intergenic	novelGene_15628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33174944	33184530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33174900_33184500
ES.18853.1	chr2	-	6267	20	NNC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.3418527636611	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261467	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214714_33226524_33226633_33230724_33230846_33261281
ES.18853.11	chr2	-	5906	16	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	12.0546901891154	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCGTTCTATTTATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	33261503	33023433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.12	chr2	-	6149	19	NNC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	12.1883368658548	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATATCGTTCTATTTA	NA	False	NA	NA	False	ATTAAA	-11	NA	33261446	33023436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33168257_33168375_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.14	chr2	-	5781	17	NNC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	732	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	11.5405196481788	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATATCGTTCTATTTA	235	False	NA	NA	False	ATTAAA	-11	NA	33260709	33023436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33260689
ES.18853.15	chr2	-	6144	19	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	5	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	12.4855472002187	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTGTTTACTTTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	33261477	33023472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.16	chr2	-	2420	17	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	9.82960292941683	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	33261488	33026984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.17	chr2	-	2702	20	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	11.3205620290576	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	33261457	33026984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.19	chr2	-	4095	1	Intergenic	novelGene_15624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	5251	False	NA	NA	False	NA	NA	NA	33081937	33077842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33077800_33081900
ES.18853.2	chr2	-	5972	17	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	10.2255806681088	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261488	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33230724_33230846_33261281
ES.18853.20	chr2	-	5096	1	Intergenic	novelGene_15627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCAGTTCCCACTTGAC	NA	False	NA	NA	False	NA	NA	NA	33174819	33169723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33169700_33174800
ES.18853.3	chr2	-	6095	18	FSM	ENSMUSG00000038831.17	ENSMUST00000131298.7	6035	18	-62	2	-5	-2	multi-exon	FALSE	canonical	3	17	junction_6	7.39259893617541	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261503	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.4	chr2	-	6023	17	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	10.0076142886304	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261482	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33226524_33226633_33230724_33230846_33261281
ES.18853.5	chr2	-	5936	17	NIC	ENSMUSG00000038831.17	novel	6035	18	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	10.5310181725225	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261437	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.6	chr2	-	9564	19	NIC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	5	-2	intron_retention	FALSE	canonical	2	6	junction_7	10.992281242471	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTTCTATTTATTAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	33261477	33023430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18853.9	chr2	-	7270	19	NNC	ENSMUSG00000038831.17	novel	2738	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	12.1177351915628	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTCTATTTATTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	33261489	33023432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33045299_33045352_33047783_33049049_33058192_33058261_33062429_33062524_33064418_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ES.18854.1	chr2	+	169	1	Intergenic	novelGene_15629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33264728	33264897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33264700_33264900
ES.18855.1	chr2	+	193	1	Intergenic	novelGene_15630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	33268686	33268879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33268700_33268900
ES.18856.1	chr2	+	214	2	Antisense	novelGene_ENSMUSG00000068966.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTTTGGGCCAGATCG	NA	False	NA	NA	False	NA	NA	NA	33282449	33306746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_33282574_33306656
ES.18856.2	chr2	+	176	1	Intergenic	novelGene_15631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	33282449	33282625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33282400_33282600
ES.18857.1	chr2	+	155	1	Intergenic	novelGene_15632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTAG	NA	False	NA	NA	False	NA	NA	NA	33307287	33307442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33307300_33307400
ES.18858.1	chr2	+	1213	1	Intergenic	novelGene_15633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCTCCAAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	33312203	33313416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33312200_33313400
ES.18859.1	chr2	+	211	1	Intergenic	novelGene_15634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGTCTCTGTCTATG	NA	False	NA	NA	False	NA	NA	NA	33331363	33331574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33331400_33331600
ES.1886.1	chr1	+	2339	7	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	1	8	intron_retention	FALSE	canonical	3	167	junction_1	23.5772960470214	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTGCATCTCAGGCC	NA	False	NA	24	True	AATAAA	-24	NA	171097898	171104477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098772_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.10	chr1	+	1967	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	91.0706284978862	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171097912	171104466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.11	chr1	+	4462	5	NNC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	99.45099295633	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097912	171104467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171098944_171099299_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.12	chr1	+	1849	8	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	3	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_4	95.4847995168629	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171097915	171104466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.13	chr1	+	4023	5	NIC	ENSMUSG00000052423.16	novel	2805	6	NA	NA	4	-3	intron_retention	FALSE	canonical	3	167	junction_1	28.3758259791675	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGCTTGTGATTTC	NA	False	NA	11	True	AATAAA	-11	NA	171097916	171104464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098772_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.14	chr1	+	6434	2	FSM	ENSMUSG00000052423.16	ENSMUST00000132890.3	3264	2	-3168	-2	4	0	multi-exon	FALSE	canonical	3	238	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097916	171104469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171103560_171103678
ES.1886.15	chr1	+	2758	7	NNC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	5	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	88.8463092461733	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGCTTGTGATTTC	NA	False	NA	11	True	AATAAA	-11	NA	171097917	171104464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101839_171101959_171103454_171103560_171103678
ES.1886.16	chr1	+	3413	1	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-31	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171101053	171104466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171101100_171104500
ES.1886.2	chr1	+	1998	8	FSM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	1	-1	1	0	multi-exon	FALSE	non_canonical	1	74	junction_2	53.1005976368228	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097898	171104469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.3	chr1	+	2944	7	NIC	ENSMUSG00000052423.16	novel	1758	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	46	junction_1	66.4665747241089	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTGATTTCTGC	NA	False	NA	14	True	AATAAA	-14	NA	171097903	171104467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098152_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.4	chr1	+	2099	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	non_canonical	1	46	junction_1	80.4478674359986	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097904	171104469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.5	chr1	+	1964	8	NNC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	76.7699983916974	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGCTTGTGATTTC	NA	False	NA	11	True	AATAAA	-11	NA	171097904	171104464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171097985_171098772_171098944_171099299_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.6	chr1	+	4836	4	NIC	ENSMUSG00000052423.16	novel	2805	6	NA	NA	-4	8	intron_retention	FALSE	canonical	3	223	junction_2	6.23609564462324	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTGCATCTCAGGCC	NA	False	NA	24	True	AATAAA	-24	NA	171097904	171104477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.7	chr1	+	2876	5	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	100.315751504936	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	15	True	AATAAA	-15	NA	171097904	171104468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171099572_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.8	chr1	+	3629	5	NIC	ENSMUSG00000052423.16	novel	2805	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	209	junction_1	11.0764389584379	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171097904	171104466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.1886.9	chr1	+	1862	8	NIC	ENSMUSG00000052423.16	novel	1998	8	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	74.0904025842892	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	False	NA	13	True	AATAAA	-13	NA	171097910	171104466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ES.18860.1	chr2	-	6646	3	FSM	ENSMUSG00000068966.11	ENSMUST00000113158.8	6602	3	-44	0	-44	0	multi-exon	FALSE	canonical	3	36	junction_2	5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGGTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-18	NA	33321380	33296119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33318112_33318233_33321242
ES.18860.10	chr2	-	4882	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	32	-4250	32	-1561	multi-exon	FALSE	canonical	3	85	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCATCTTCCTGGTCA	NA	False	NA	NA	False	AATACA	-34	NA	33321297	33297680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33321242
ES.18860.11	chr2	-	3859	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-26	-3169	-19	-2642	multi-exon	FALSE	canonical	3	85	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCGTATTGTGATATC	NA	False	NA	NA	False	ATTAAA	-14	NA	33321355	33298761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33321242
ES.18860.12	chr2	-	2184	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-20	-1500	-13	1500	multi-exon	FALSE	canonical	3	85	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGCTCTGGCTTTGTT	NA	False	NA	NA	False	AATATA	-18	NA	33321349	33300430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33321242
ES.18860.13	chr2	-	2256	3	FSM	ENSMUSG00000068966.11	ENSMUST00000113158.8	6602	3	-40	4386	-40	1425	multi-exon	FALSE	canonical	3	36	junction_2	5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATACATTCTCAAATTT	NA	False	NA	NA	False	NA	NA	NA	33321376	33300505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33318112_33318233_33321242
ES.18860.2	chr2	-	6704	2	FSM	ENSMUSG00000068966.11	ENSMUST00000134589.2	664	2	-229	-5811	-222	0	multi-exon	FALSE	canonical	3	85	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGGTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-18	NA	33321558	33296119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33302508_33321242
ES.18860.3	chr2	-	6572	2	NNC	ENSMUSG00000068966.11	novel	6510	2	NA	NA	-17879	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	33339215	33296120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33302508_33339030
ES.18860.4	chr2	-	6626	3	NNC	ENSMUSG00000068966.11	novel	6602	3	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	33321256	33296120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33302508_33318112_33318233_33321137
ES.18860.5	chr2	-	6505	2	NNC	ENSMUSG00000068966.11	novel	664	2	NA	NA	74	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	33321255	33296120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33302508_33321137
ES.18860.7	chr2	-	6858	3	NNC	ENSMUSG00000068966.11	novel	6602	3	NA	NA	90	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	22	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGCTGTGGTCTCTGT	NA	False	NA	-3	True	AATAAA	-44	NA	33321239	33296122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33302508_33318112_33318233_33320886
ES.18860.8	chr2	-	7822	1	NIC	ENSMUSG00000068966.11	novel	6510	2	NA	NA	14290	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGCTGTGGTCTCTGT	899	False	NA	-3	True	AATAAA	-44	NA	33303944	33296122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33296100_33303900
ES.18860.9	chr2	-	6787	2	NNC	ENSMUSG00000068966.11	novel	664	2	NA	NA	38	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACCTTGCTGTGGTCTC	NA	False	NA	-6	True	AATAAA	-41	NA	33321291	33296125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33302508_33320886
ES.18861.1	chr2	+	2563	1	Intergenic	novelGene_15635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGCACCACCATGCCT	NA	False	NA	NA	False	NA	NA	NA	33346360	33348923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33346400_33348900
ES.18861.2	chr2	+	324	1	Intergenic	novelGene_15636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAGAAAAAGTACGCT	NA	False	NA	NA	False	AGTAAA	-41	NA	33348708	33349032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33348700_33349000
ES.18862.1	chr2	-	5485	4	NIC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	-305	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	1.4142135623731	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTGTTTTCACTCAT	NA	False	NA	-1	True	AATAAA	-25	NA	33358876	33340298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33345136_33352277_33352370_33354925_33355050_33358444
ES.18862.10	chr2	-	4896	2	NNC	ENSMUSG00000026788.14	novel	674	2	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTGTGTTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	33358566	33340304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33358501
ES.18862.11	chr2	-	4970	3	NNC	ENSMUSG00000026788.14	novel	4998	3	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTGTGTTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	33358579	33340304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33354925_33354987_33358501
ES.18862.12	chr2	-	5130	4	NNC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3026129524645	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTGTGTTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	33358533	33340304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33352220_33352370_33354925_33354987_33358444
ES.18862.13	chr2	-	3344	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	52	-2909	-2	1543	multi-exon	FALSE	canonical	3	37	junction_2	3.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTAGGGTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	33358519	33341990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33354925_33355050_33358444
ES.18862.14	chr2	-	1687	2	NIC	ENSMUSG00000026788.14	novel	4998	3	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTGTATGTTCTCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	33358536	33343540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33345136_33358444
ES.18862.15	chr2	-	5206	2	FSM	ENSMUSG00000026788.14	ENSMUST00000155198.2	674	2	-3442	-1090	8	-7	multi-exon	FALSE	canonical	3	44	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTGTATGTTCTCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	33358536	33343540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33354925
ES.18862.16	chr2	-	1786	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	-16	58	11	-58	multi-exon	FALSE	canonical	3	37	junction_1	10.6770782520313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTCTGAAAGACCAGC	NA	False	NA	NA	False	NA	NA	NA	33358533	33343591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
ES.18862.2	chr2	-	5049	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	-51	0	-24	0	multi-exon	TRUE	canonical	3	44	junction_1	8.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTGTTTTCACTCAT	NA	False	NA	-1	True	AATAAA	-25	NA	33358595	33340298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33354925_33354987_33358444
ES.18862.3	chr2	-	4996	2	NIC	ENSMUSG00000026788.14	novel	4998	3	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTGTTTTCACTCAT	NA	False	NA	-1	True	AATAAA	-25	NA	33358603	33340298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_33345136_33358444
ES.18862.4	chr2	-	5117	3	FSM	ENSMUSG00000026788.14	ENSMUST00000126442.2	487	3	-31	-4599	-31	-2	multi-exon	FALSE	canonical	3	37	junction_2	3.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGTTGTTTTCACTC	NA	False	NA	-3	True	AATAAA	-23	NA	33358602	33340300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33354925_33355050_33358444
ES.18862.5	chr2	-	5155	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	-95	-3232	-41	-3	multi-exon	FALSE	canonical	3	37	junction_1	10.6770782520313	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTGTTGTTTTCACT	NA	False	NA	-4	True	AATAAA	-22	NA	33358612	33340301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
ES.18862.6	chr2	-	5156	4	NNC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	-742	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.1903515328563	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTTGTGTTGTTTTCAC	NA	False	NA	-5	True	AATAAA	-21	NA	33355836	33340302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33352277_33352370_33354925_33354987_33355666
ES.18862.7	chr2	-	4919	2	NNC	ENSMUSG00000026788.14	novel	674	2	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-20	NA	33358566	33340303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33358479
ES.18862.8	chr2	-	3433	5	NNC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9601912559977	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-20	NA	33358594	33340303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33342195_33343896_33345136_33352277_33352370_33354925_33354987_33358444
ES.18862.9	chr2	-	5106	4	NNC	ENSMUSG00000026788.14	novel	1828	4	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.1903515328563	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAAGTTGTGTTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	33358560	33340304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33345136_33352277_33352370_33354925_33355050_33358501
ES.18863.1	chr2	+	196	1	Intergenic	novelGene_15637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCTTTTCCTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	33369854	33370050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33369900_33370000
ES.18864.1	chr2	+	393	2	FSM	ENSMUSG00000086939.2	ENSMUST00000134014.2	390	2	-8	5	-8	-5	multi-exon	TRUE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTGATAGATTATC	NA	False	NA	NA	False	AATAAA	-11	NA	33379785	33393639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_33379998_33393458
ES.18865.1	chr2	-	159	1	Intergenic	novelGene_15638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	33398836	33398677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33398700_33398800
ES.18866.1	chr2	-	5398	8	FSM	ENSMUSG00000038765.15	ENSMUST00000176067.2	1420	8	-618	-3360	-490	0	multi-exon	TRUE	canonical	0	0	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCCCCTCCTTGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	33531110	33450976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33454806_33455072_33455238_33456682_33456750_33456896_33456975_33457159_33457342_33459061_33459295_33529500_33529688_33530453
ES.18866.2	chr2	-	1607	1	Intergenic	novelGene_15639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGATTTTTTTCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	33528847	33527240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33527200_33528800
ES.18867.1	chr2	+	6125	1	Intergenic	novelGene_15640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	33628914	33635039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33628900_33635000
ES.18867.2	chr2	+	177	1	Intergenic	novelGene_15641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	33631956	33632133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33632000_33632100
ES.18868.1	chr2	+	158	1	Intergenic	novelGene_15643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	33753816	33753974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33753800_33754000
ES.18869.1	chr2	+	2703	1	Intergenic	novelGene_15644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTGATCCAACCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	33755034	33757737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33755000_33757700
ES.1887.1	chr1	-	2479	1	Antisense	novelGene_ENSMUSG00000052423.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGCAGGGAACAAAGTC	NA	False	NA	NA	False	NA	NA	NA	171101650	171099171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_171099200_171101600
ES.18870.1	chr2	+	4377	2	Antisense	novelGene_ENSMUSG00000038740.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33765923	33774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_33769237_33773170
ES.18870.2	chr2	+	4368	2	Antisense	novelGene_ENSMUSG00000038740.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAACAAGTTCATGTAT	NA	False	NA	NA	False	NA	NA	NA	33765923	33774260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_33769234_33773202
ES.18870.3	chr2	+	2902	1	Intergenic	novelGene_15645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAACAAGTTCATGTAT	NA	False	NA	NA	False	NA	NA	NA	33771358	33774260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33771400_33774300
ES.18871.1	chr2	-	5588	7	ISM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	53328	-1463	-45859	1463	3prime_fragment	FALSE	canonical	3	7	junction_2	3.95811402901264	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAGGCGAACGTGACC	8791	False	NA	NA	False	AGTAAA	-29	NA	33724630	33618501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548
ES.18871.10	chr2	-	601	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	-78	-3	-78	3	multi-exon	FALSE	canonical	3	76	junction_1	8	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAAGTGTGTTTTGAT	4135	False	NA	-2	True	AATAAA	-18	NA	33777572	33763622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33763860_33764349_33764473_33777331
ES.18871.11	chr2	-	1006	3	NNC	ENSMUSG00000038740.10	novel	520	3	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGCTGAAGTGTGTTT	3716	False	NA	-6	True	AATAAA	-14	NA	33777991	33763626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33763850_33764349_33764473_33777331
ES.18871.2	chr2	-	4687	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	314	-3	-150	3	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCTGTTATTTTTA	4063	False	NA	2	True	AATAAA	-23	NA	33777644	33619961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
ES.18871.5	chr2	-	4481	10	NNC	ENSMUSG00000038740.10	novel	4998	10	NA	NA	261	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	6.71648055986996	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTAACCTCGTTT	4474	False	NA	-20	True	AATAAA	-1	NA	33777233	33619983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777104
ES.18871.6	chr2	-	1235	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	509	3254	45	-3254	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGGCTCCTGTGTGAT	4258	False	NA	NA	False	NA	NA	NA	33777449	33623218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
ES.18871.7	chr2	-	4924	1	Intergenic	novelGene_15642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGTAGCTTGAGTGG	NA	False	NA	NA	False	NA	NA	NA	33667041	33662117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33662100_33667000
ES.18871.8	chr2	-	758	4	NNC	ENSMUSG00000038740.10	novel	520	3	NA	NA	-132	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.8267435801184	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAAGTGTGTTTTGAT	4081	False	NA	-2	True	AATAAA	-18	NA	33777626	33763622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33763860_33764349_33764473_33765760_33765864_33777331
ES.18871.9	chr2	-	473	3	NNC	ENSMUSG00000038740.10	novel	520	3	NA	NA	11281	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAAGTGTGTTTTGAT	NA	False	NA	-2	True	AATAAA	-18	NA	33765576	33763622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33763860_33764349_33764473_33765463
ES.18872.1	chr2	+	165	1	Intergenic	novelGene_15646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33822238	33822403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_33822200_33822400
ES.18873.1	chr2	+	3082	3	NNC	ENSMUSG00000086904.2	novel	1960	2	NA	NA	-2296	3	intron_retention	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGTTTTTTGTTTCTGT	NA	False	NA	NA	False	GATAAA	-17	NA	33865961	33870339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_33866202_33866779_33869030_33869747
ES.18873.2	chr2	+	4373	1	Genic_Genomic	ENSMUSG00000086904.2	novel	NA	NA	NA	NA	-2291	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGTTTTTTGTTTCTGT	NA	False	NA	NA	False	GATAAA	-17	NA	33865966	33870339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_33866000_33870300
ES.18873.3	chr2	+	3782	2	NNC	ENSMUSG00000086904.2	novel	1960	2	NA	NA	-2281	0	intron_retention	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCAGTTTTTTGTTTC	NA	False	NA	NA	False	GATAAA	-14	NA	33865976	33870336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_33866202_33866779
ES.18874.1	chr2	-	176	1	Intergenic	novelGene_15647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	33876188	33876012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_33876000_33876200
ES.18875.1	chr2	-	2576	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80959	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGAATTCATACTGAC	NA	False	NA	NA	False	NA	NA	NA	33916782	33908299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33910509_33915810_33915970_33916574
ES.18875.2	chr2	-	1645	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80982	-907	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATACTGTTTACCCTC	NA	False	NA	NA	False	NA	NA	NA	33916759	33909207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_33910509_33915810_33915970_33916574
ES.18876.1	chr2	+	829	3	Intergenic	novelGene_15648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	TATAAA	-25	NA	34021318	34027618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34021538_34024820_34024947_34027134
ES.18876.2	chr2	+	609	2	Intergenic	novelGene_15649	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	TATAAA	-25	NA	34021412	34027618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34021538_34027134
ES.18876.3	chr2	+	6184	1	Intergenic	novelGene_15650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGTTTGTTTGTTTG	NA	False	NA	NA	False	TATAAA	-22	NA	34021431	34027615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34021400_34027600
ES.18877.1	chr2	+	2681	1	Intergenic	novelGene_15652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAATGCAGAACAGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	34140108	34142789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34140100_34142800
ES.18878.1	chr2	+	176	1	Intergenic	novelGene_15654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	34191149	34191325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34191100_34191300
ES.18879.1	chr2	+	6444	1	Intergenic	novelGene_15656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCATAAGGAACTGGAG	NA	False	NA	NA	False	NA	NA	NA	34219972	34226416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34220000_34226400
ES.1888.1	chr1	-	4317	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-1	1	intron_retention	TRUE	canonical	3	87	junction_7	17.1386806668425	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGGGGATTTTCCTCA	5188	False	NA	NA	False	AATAAA	-13	NA	171108761	171103561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.10	chr1	-	1648	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-26	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	37.8612080417433	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5230	False	NA	-14	True	AGTAAA	-17	NA	171108719	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.11	chr1	-	1572	11	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	36.54257790578	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5190	False	NA	-14	True	AGTAAA	-17	NA	171108759	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107961_171108097_171108247_171108343_171108446
ES.1888.12	chr1	-	1914	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-27	1	intron_retention	FALSE	canonical	3	37	junction_8	30.7939030135824	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5229	False	NA	-14	True	AGTAAA	-17	NA	171108720	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171108097_171108247_171108343_171108446
ES.1888.13	chr1	-	1841	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	-19	-1	-19	1	multi-exon	FALSE	canonical	3	37	junction_8	32.2076595444831	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5170	False	NA	-14	True	AGTAAA	-17	NA	171108779	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.14	chr1	-	3229	9	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	27	1	intron_retention	FALSE	canonical	2	5	junction_3	37.1817747693679	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5216	False	NA	-14	True	AGTAAA	-17	NA	171108733	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105324_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.15	chr1	-	3060	11	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	10	junction_8	35.5887622712564	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5188	False	NA	-15	True	AGTAAA	-16	NA	171108761	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107576_171107713_171107846_171107961_171108097_171108247_171108343_171108446
ES.1888.16	chr1	-	2698	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	37	junction_7	32.0949006016236	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5240	False	NA	-15	True	AGTAAA	-16	NA	171108709	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.17	chr1	-	3328	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	87	junction_7	17.1386806668425	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5174	False	NA	-15	True	AGTAAA	-16	NA	171108775	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.18	chr1	-	1783	13	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.6923750673219	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5202	False	NA	-15	True	AGTAAA	-16	NA	171108747	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105324_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107863_171107961_171108097_171108247_171108343_171108446
ES.1888.19	chr1	-	3274	9	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_7	39.0032049965128	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5218	False	NA	-15	True	AGTAAA	-16	NA	171108731	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108087_171108247_171108343_171108446
ES.1888.2	chr1	-	4564	6	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	-7	1	intron_retention	FALSE	canonical	3	87	junction_4	21.1716791965116	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGGGGATTTTCCTCA	5249	False	NA	NA	False	AATAAA	-13	NA	171108700	171103561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.20	chr1	-	3370	9	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	39.0824449081682	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108401_171108446
ES.1888.21	chr1	-	3409	8	FSM	ENSMUSG00000062729.13	ENSMUST00000155083.9	4412	8	1	1002	1	0	multi-exon	FALSE	canonical	3	87	junction_6	18.2633792165679	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.22	chr1	-	3034	10	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-15	0	intron_retention	FALSE	canonical	3	37	junction_7	26.8856747390286	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5174	False	NA	-15	True	AGTAAA	-16	NA	171108775	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171108097_171108247_171108343_171108446
ES.1888.23	chr1	-	1781	13	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	36.6727267719335	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5245	False	NA	-15	True	AGTAAA	-16	NA	171108704	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107846_171107961_171108097_171108247_171108343_171108446
ES.1888.24	chr1	-	3022	10	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_6	49.1447848356589	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5238	False	NA	-15	True	AGTAAA	-16	NA	171108711	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107009_171107149_171107442_171108097_171108247_171108401_171108446
ES.1888.25	chr1	-	2133	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	42	junction_9	30.0522960165736	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5171	False	NA	-15	True	AGTAAA	-16	NA	171108778	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.26	chr1	-	2764	12	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	10	junction_9	37.1728150913834	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5190	False	NA	-15	True	AGTAAA	-16	NA	171108759	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171107576_171107713_171107846_171107961_171108097_171108247_171108343_171108446
ES.1888.28	chr1	-	3154	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_7	36.8480362811613	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5249	False	NA	-15	True	AGTAAA	-16	NA	171108700	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107863_171107961_171108097_171108247_171108343_171108446
ES.1888.29	chr1	-	3153	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	22	0	intron_retention	FALSE	canonical	3	45	junction_7	24.9221008566917	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5211	False	NA	-15	True	AGTAAA	-16	NA	171108738	171104564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107576_171107713_171108097_171108247_171108343_171108446
ES.1888.3	chr1	-	4813	4	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	87	junction_3	25.5734237050888	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGGGGATTTTCCTCA	5190	False	NA	NA	False	AATAAA	-13	NA	171108759	171103561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104902_171105019_171106888_171107003_171108097_171108247
ES.1888.30	chr1	-	3337	7	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	82	-1	intron_retention	FALSE	canonical	3	87	junction_5	19.7266035821904	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCTCTTTACTATTCA	5338	False	NA	-16	True	AGTAAA	-15	NA	171108611	171104565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.31	chr1	-	3179	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	42	junction_7	25.6471787488951	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCTCTTTACTATTCA	5190	False	NA	-16	True	AGTAAA	-15	NA	171108759	171104565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.32	chr1	-	1964	11	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-28	-2	intron_retention	FALSE	canonical	2	5	junction_8	35.8258286715046	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5228	False	NA	-17	True	AGTAAA	-14	NA	171108721	171104566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107063_171107442_171108097_171108247_171108343_171108446
ES.1888.33	chr1	-	3494	7	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	87	junction_5	19.3362066830309	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5237	False	NA	-17	True	AGTAAA	-14	NA	171108712	171104566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.34	chr1	-	3065	9	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	37	junction_6	28.2043325572508	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5238	False	NA	-17	True	AGTAAA	-14	NA	171108711	171104566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171108097_171108247_171108343_171108446
ES.1888.35	chr1	-	2235	11	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	11	-2	intron_retention	FALSE	canonical	1	2	junction_7	39.2021683073781	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTCTTTACTATTC	5200	False	NA	-17	True	AGTAAA	-14	NA	171108749	171104566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106883_171107003_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.36	chr1	-	2891	10	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-28	-3	intron_retention	FALSE	canonical	2	5	junction_7	35.4425286838591	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCTCTTTACTATT	5228	False	NA	-18	True	AGTAAA	-13	NA	171108721	171104567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107063_171107442_171108097_171108247_171108343_171108446
ES.1888.37	chr1	-	2321	10	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	53	junction_6	23.0656604361988	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTGGTTTGCTCTTTA	5245	False	NA	-23	True	AGTAAA	-8	NA	171108704	171104572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.4	chr1	-	3695	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	37	junction_7	32.0949006016236	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGGGATTTTCCTC	5245	False	NA	NA	False	AATAAA	-12	NA	171108704	171103562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ES.1888.5	chr1	-	3545	3	NNC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	-26	0	intron_retention	FALSE	non_canonical	0	0	junction_2	72	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGGGGATTTTCCTC	5230	False	NA	NA	False	AATAAA	-12	NA	171108719	171103562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104902_171105019_171106608_171108101
ES.1888.6	chr1	-	1746	12	NNC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	1	26	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	44.2272493693295	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTTGTCAGGGGTGAG	5190	False	NA	11	True	AGTAAA	-42	NA	171108759	171104538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105785_171106696_171106888_171107003_171107149_171107442_171107576_171107961_171108097_171108247_171108343_171108446
ES.1888.7	chr1	-	3594	6	NIC	ENSMUSG00000062729.13	novel	4412	8	NA	NA	-16	24	intron_retention	FALSE	canonical	3	87	junction_4	21.1716791965116	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGACTTGTCAGGGGTG	5240	False	NA	9	True	AGTAAA	-40	NA	171108709	171104540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171106888_171107003_171108097_171108247_171108343_171108446
ES.1888.8	chr1	-	2146	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	1	3	intron_retention	TRUE	canonical	0	0	junction_9	37.5581092475105	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTTACTATTCATCAC	5190	False	NA	-12	True	AGTAAA	-19	NA	171108759	171104561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107576_171107713_171107830_171107932_171108097_171108247_171108343_171108446
ES.1888.9	chr1	-	3278	9	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	-13	1	intron_retention	FALSE	canonical	1	1	junction_3	38.361561164791	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTTTACTATTCATC	5243	False	NA	-14	True	AGTAAA	-17	NA	171108706	171104563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171104773_171104858_171104902_171105019_171105188_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
ES.18880.1	chr2	-	3430	8	FSM	ENSMUSG00000038718.16	ENSMUST00000113132.9	2734	8	-696	0	408	0	multi-exon	FALSE	canonical	3	6	junction_2	11.7577590534584	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	142	False	NA	NA	False	AATAAA	-24	NA	34262746	34061468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ES.18880.10	chr2	-	3275	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	-686	-2	412	2	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGTTCTTGTGATGCGT	146	False	NA	NA	False	NA	NA	NA	34262742	34061732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ES.18880.11	chr2	-	3183	10	NNC	ENSMUSG00000038718.16	novel	2587	9	NA	NA	426	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.573733154163	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGTTCTTGTGATGCGT	160	False	NA	NA	False	NA	NA	NA	34262728	34061732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732_34262387_34262464
ES.18880.12	chr2	-	1482	8	FSM	ENSMUSG00000038718.16	ENSMUST00000113132.9	2734	8	42	1210	42	206	multi-exon	FALSE	canonical	3	6	junction_2	11.7577590534584	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTTGACACTTCTTT	880	False	NA	NA	False	AAAAAG	-31	NA	34262008	34062678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ES.18880.13	chr2	-	174	1	Intergenic	novelGene_15651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	34079408	34079234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34079200_34079400
ES.18880.14	chr2	-	212	1	Intergenic	novelGene_15653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTTACAAGATCT	NA	False	NA	NA	False	NA	NA	NA	34155870	34155658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34155700_34155900
ES.18880.15	chr2	-	3852	1	Intergenic	novelGene_15655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAGACTACAACCTC	NA	False	NA	NA	False	NA	NA	NA	34205753	34201901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34201900_34205800
ES.18880.16	chr2	-	3689	1	Intergenic	novelGene_15657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAATATTGTGAAAGAAT	5013	False	NA	NA	False	NA	NA	NA	34250458	34246769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34246800_34250500
ES.18880.2	chr2	-	3538	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	-686	-265	412	-1	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATGTGTGTCTCTG	146	False	NA	NA	False	AATAAA	-23	NA	34262742	34061469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ES.18880.3	chr2	-	1968	5	NNC	ENSMUSG00000038718.16	novel	1026	7	NA	NA	83565	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.4928556845359	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATGTGTGTCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	34095299	34061469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34095239
ES.18880.4	chr2	-	3462	10	NNC	ENSMUSG00000038718.16	novel	2587	9	NA	NA	412	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.573733154163	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATGTGTGTCTCTG	146	False	NA	NA	False	AATAAA	-23	NA	34262742	34061469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732_34262386_34262461
ES.18880.5	chr2	-	2854	9	NIC	ENSMUSG00000038718.16	novel	2587	9	NA	NA	-122	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	13.1380887118332	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATGTGTGTCTCTG	1501	False	NA	NA	False	AATAAA	-23	NA	34261387	34061469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261061
ES.18880.6	chr2	-	2511	8	NIC	ENSMUSG00000038718.16	novel	2734	8	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	15.9360968770107	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATGTGTGTCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	34263162	34061469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34263066
ES.18880.7	chr2	-	3292	8	FSM	ENSMUSG00000038718.16	ENSMUST00000153278.8	1063	8	-808	-1421	414	-3	multi-exon	FALSE	canonical	1	7	junction_6	10.7285619174392	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGCCATGTGTGTCTC	148	False	NA	NA	False	AATAAA	-21	NA	34262740	34061471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34260835_34260910_34261732
ES.18880.9	chr2	-	3420	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	-683	-150	415	-116	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCGTTCCGTGTTCC	149	False	NA	NA	False	NA	NA	NA	34262739	34061584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ES.18881.1	chr2	-	206	1	Intergenic	novelGene_15658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAAGTAATATGTCATA	6030	False	NA	NA	False	AAAAAG	-4	NA	34272288	34272082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34272100_34272300
ES.18882.1	chr2	+	178	1	Intergenic	novelGene_15659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGATTGA	NA	False	NA	NA	False	NA	NA	NA	34290192	34290370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34290200_34290400
ES.18883.1	chr2	+	2082	12	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	61.6099433855197	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296781	34513925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.10	chr2	+	3340	12	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5521520725919	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296862	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322117_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.11	chr2	+	3552	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.5401715417366	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296866	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34341951_34342064_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.12	chr2	+	3458	12	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	63.3996897559998	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296867	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325124_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.13	chr2	+	1657	7	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-6	-14563	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	83.0396491643199	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGACTCTCTTATATTG	NA	False	NA	NA	False	NA	NA	NA	34296867	34409347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34409006
ES.18883.14	chr2	+	2397	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-321	1035	0	-5	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGTTGGTATGATGGA	NA	False	NA	21	True	AATAAA	-15	NA	34296873	34513926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.15	chr2	+	2664	14	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.8454802614617	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGTTGGTATGATGGA	NA	False	NA	21	True	AATAAA	-15	NA	34296873	34513926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34319529_34319639_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.16	chr2	+	3505	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.356220438112	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296873	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34368706_34368780_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.17	chr2	+	3013	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296874	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.18	chr2	+	3252	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	65.5481502408725	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTTGTATATTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	34296874	34514959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.19	chr2	+	3662	14	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.653710444707	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296874	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34368706_34368780_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.2	chr2	+	2926	11	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	85.6611930806477	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296797	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.20	chr2	+	3995	10	ISM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-320	25200	1	-23726	5prime_fragment	FALSE	canonical	3	190	junction_6	18.2513317626718	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACAGCCTTCACTGACA	NA	False	NA	NA	False	AATAAA	-17	NA	34296874	34489761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434
ES.18883.21	chr2	+	3259	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	64.6092872581024	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296874	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.22	chr2	+	3174	11	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_2	79.8949310031619	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296874	34514964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.23	chr2	+	3384	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	61.3656504532915	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTGTATATTGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	34296874	34514960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434_34514418_34514463
ES.18883.24	chr2	+	3539	13	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	80.7690466013366	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTGTATATTGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	34296874	34514960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34319529_34319639_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.25	chr2	+	3592	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	73.4988662044071	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296874	34514964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.26	chr2	+	3391	2	NNC	ENSMUSG00000038696.15	novel	625	3	NA	NA	1	-16904	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGGGGAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	34296874	34305240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34299591_34304565
ES.18883.27	chr2	+	3706	14	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.8454802614617	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296874	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34310824_34310941_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.28	chr2	+	3325	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	63.4010252283037	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296875	34514964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.29	chr2	+	1977	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGTTGGTATGATGGA	NA	False	NA	21	True	AATAAA	-15	NA	34296875	34513926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.3	chr2	+	3083	12	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	61.6099433855197	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTGTATATTGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	34296815	34514960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.30	chr2	+	2154	11	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.1568917730903	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGTTGGTATGATGGA	NA	False	NA	21	True	AATAAA	-15	NA	34296875	34513926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322117_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34509856_34509955_34513434
ES.18883.31	chr2	+	2972	6	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	2497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	106.814605742848	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTATGGGTGGCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	34296875	34371277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34368706_34368780_34369336
ES.18883.32	chr2	+	2222	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	65.5481502408725	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTATGATGGACCAT	NA	False	NA	25	True	AATAAA	-19	NA	34296875	34513930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.33	chr2	+	3135	12	NNC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	60.7789654784293	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296880	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34296977_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.34	chr2	+	2298	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.4921799913343	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGTTGGTATGATGGA	NA	False	NA	21	True	AATAAA	-15	NA	34296882	34513926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.35	chr2	+	2983	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	85.6501641404379	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTTGTATATTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	34296884	34514959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.36	chr2	+	3466	12	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	90.0961836819384	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTTGTATATTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	34296887	34514959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.37	chr2	+	3287	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.4921799913343	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296929	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.38	chr2	+	2473	13	NNC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	56	-7	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	73.4988662044071	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGGTTGGTATGATG	NA	False	NA	19	True	AATAAA	-13	NA	34296953	34513924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34297267_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.39	chr2	+	1961	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	107	-438	83	-6	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296980	34513925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.4	chr2	+	3131	13	NNC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.2717905610016	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296816	34514962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34510685_34510733_34513434
ES.18883.40	chr2	+	171	1	Intergenic	novelGene_15669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	34483329	34483500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34483300_34483500
ES.18883.41	chr2	+	238	1	Intergenic	novelGene_15670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTGATGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	34500728	34500966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34500700_34501000
ES.18883.5	chr2	+	3220	13	NNC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.2787043553708	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34296846	34514961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34296870_34309119_34309278_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.6	chr2	+	3462	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-348	-3	-27	2	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296846	34514964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.7	chr2	+	2222	10	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	-24	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.8448594268592	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTGGTTGGTATGATGG	NA	False	NA	20	True	AATAAA	-14	NA	34296849	34513925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34297267_34322014_34322343_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18883.8	chr2	+	3222	8	ISM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-343	60115	-22	30936	5prime_fragment	FALSE	canonical	3	190	junction_6	17.6635217326557	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAGAAATCTATATG	NA	False	NA	NA	False	AATAAA	-23	NA	34296851	34454846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066
ES.18883.9	chr2	+	3120	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	-13	-1477	-13	2	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATATTGCTTTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	34296860	34514964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ES.18884.1	chr2	-	5830	1	Intergenic	novelGene_15660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGCTGAGAATGTCAAT	9593	False	NA	NA	False	NA	NA	NA	34317094	34311264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34311300_34317100
ES.18885.1	chr2	-	185	1	Intergenic	novelGene_15661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAGAGC	NA	False	NA	NA	False	NA	NA	NA	34329080	34328895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34328900_34329100
ES.18886.1	chr2	-	173	1	Intergenic	novelGene_15662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTTCTATCAACACA	5953	False	NA	NA	False	NA	NA	NA	34344667	34344494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34344500_34344700
ES.18887.1	chr2	-	177	1	Intergenic	novelGene_15663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATCTAG	9937	False	NA	NA	False	NA	NA	NA	34362209	34362032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34362000_34362200
ES.18887.2	chr2	-	177	2	Intergenic	novelGene_15664	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATCTAG	NA	False	NA	NA	False	NA	NA	NA	34540549	34362032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34362160_34540499
ES.18887.3	chr2	-	192	1	Intergenic	novelGene_15665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTTGTGTTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	34393744	34393552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34393600_34393700
ES.18887.4	chr2	-	4626	1	Intergenic	novelGene_15666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34428723	34424097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34424100_34428700
ES.18887.5	chr2	-	166	1	Intergenic	novelGene_15667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATCTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	34438277	34438111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34438100_34438300
ES.18887.6	chr2	-	156	1	Intergenic	novelGene_15668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	34480589	34480433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34480400_34480600
ES.18888.1	chr2	-	299	1	Intergenic	novelGene_15671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAAGGACTTTATGT	NA	False	NA	NA	False	NA	NA	NA	34561075	34560776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34560800_34561100
ES.18889.1	chr2	+	2127	1	Antisense	novelGene_ENSMUSG00000026867.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTATTTCACTGTATAGT	NA	False	NA	NA	False	NA	NA	NA	34580465	34582592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34580500_34582600
ES.18889.2	chr2	+	178	1	Intergenic	novelGene_15673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAGGGTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	34581491	34581669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34581500_34581700
ES.18889.3	chr2	+	167	1	Intergenic	novelGene_15674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATAAATATTTTA	NA	False	NA	NA	False	NA	NA	NA	34582050	34582217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34582000_34582200
ES.1889.1	chr1	+	3167	2	Antisense	novelGene_ENSMUSG00000062963.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTTTATTTATTTTA	5675	False	NA	NA	False	AATAAA	-7	NA	171119873	171124545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_171120310_171121814
ES.18890.1	chr2	+	209	1	Intergenic	novelGene_15676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAATTTTTAACAGTA	8985	False	NA	NA	False	NA	NA	NA	34598638	34598847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34598600_34598800
ES.18891.1	chr2	+	155	1	Intergenic	novelGene_15677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAACGTATTGTTTGGG	5102	False	NA	NA	False	NA	NA	NA	34613617	34613772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34613600_34613800
ES.18892.1	chr2	+	177	1	Intergenic	novelGene_15678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACGT	5275	False	NA	NA	False	NA	NA	NA	34613790	34613967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34613800_34614000
ES.18893.1	chr2	+	5796	2	Antisense	novelGene_ENSMUSG00000026867.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	34626184	34634165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34629306_34631490
ES.18894.1	chr2	+	175	2	Antisense	novelGene_ENSMUSG00000026867.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	34634168	34639314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34634188_34639158
ES.18894.2	chr2	+	241	1	Intergenic	novelGene_15679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCCTTCCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	34634168	34634409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34634200_34634400
ES.18894.3	chr2	+	191	1	Intergenic	novelGene_15680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGCA	NA	False	NA	NA	False	NA	NA	NA	34634744	34634935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34634700_34634900
ES.18894.4	chr2	+	177	1	Intergenic	novelGene_15681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACTC	NA	False	NA	NA	False	NA	NA	NA	34639138	34639315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34639100_34639300
ES.18895.1	chr2	-	5350	2	ISM	ENSMUSG00000026867.20	ENSMUST00000138203.2	705	4	4124	-3329	4124	29	3prime_fragment	FALSE	canonical	3	242	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTCTGCAATCATCT	NA	False	NA	NA	False	NA	NA	NA	34570181	34564576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34568190_34568444
ES.18895.10	chr2	-	6321	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	4	3	intron_retention	FALSE	non_canonical	0	0	junction_18	45.2052032403351	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCAGGGCTCTTTTCTG	5934	False	NA	-4	True	AATAAA	-18	NA	34644419	34566192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605319_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.11	chr2	-	4359	20	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	32	2	intron_retention	TRUE	non_canonical	0	0	junction_1	51.203629113072	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCAGGGCTCTTTTCT	5962	False	NA	-5	True	AATAAA	-17	NA	34644391	34566193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34567196_34583404_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.12	chr2	-	6425	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	4	2	intron_retention	FALSE	canonical	2	6	junction_20	58.6270430562108	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCAGGGCTCTTTTCT	5934	False	NA	-5	True	AATAAA	-17	NA	34644419	34566193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.14	chr2	-	6344	25	NIC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	0	2	intron_retention	FALSE	canonical	2	8	junction_9	50.1780164348227	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCAGGGCTCTTTTCT	5916	False	NA	-5	True	AATAAA	-17	NA	34644437	34566193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.16	chr2	-	6361	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	70	0	intron_retention	FALSE	canonical	0	0	junction_14	71.2398752278891	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTGCAGGGCTCTTTT	6000	False	NA	-7	True	AATAAA	-15	NA	34644353	34566195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34619277_34619343_34620474_34620693_34644277
ES.18895.18	chr2	-	6489	28	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	38	-1	intron_retention	FALSE	canonical	1	1	junction_26	69.7674168607265	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGCAGGGCTCTTT	5968	False	NA	-8	True	AATAAA	-14	NA	34644385	34566196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34638047_34638110_34644277
ES.18895.19	chr2	-	6352	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	48.4829702060424	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGCAGGGCTCTTT	5916	False	NA	-8	True	AATAAA	-14	NA	34644437	34566196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583508_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.2	chr2	-	7203	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	154	-1599	4	-792	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTGTTTTGCCTGCCT	5934	False	NA	NA	False	TTTAAA	-24	NA	34644419	34565397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.20	chr2	-	6440	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1	junction_25	60.5361156812621	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGCAGGGCTCTTT	5927	False	NA	-8	True	AATAAA	-14	NA	34644426	34566196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34642682_34642775_34644277
ES.18895.21	chr2	-	6295	26	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_14	48.4618447853567	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGCTGCAGGGCTCTTT	5937	False	NA	-8	True	AATAAA	-14	NA	34644416	34566196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.22	chr2	-	6415	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	-2	intron_retention	FALSE	canonical	1	2	junction_25	60.1774619195337	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGCTGCAGGGCTCTT	5916	False	NA	-9	True	AATAAA	-13	NA	34644437	34566197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34644277
ES.18895.24	chr2	-	6465	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_25	62.5113480821943	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGCTGCAGGGCTCTT	5920	False	NA	-9	True	AATAAA	-13	NA	34644433	34566197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34634092_34634141_34644277
ES.18895.25	chr2	-	6532	28	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	20	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	78.2895508499749	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGCTGCAGGGCTCTT	5950	False	NA	-9	True	AATAAA	-13	NA	34644403	34566197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583511_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34642682_34642775_34644277
ES.18895.27	chr2	-	6557	28	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_27	69.2436702598602	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGCTGCAGGGCTCTT	5926	False	NA	-9	True	AATAAA	-13	NA	34644427	34566197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34625350_34625503_34644277
ES.18895.28	chr2	-	6417	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_25	60.775608234003	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTTGCTGCAGGGCTC	5933	False	NA	-11	True	AATAAA	-11	NA	34644420	34566199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34643703_34643782_34644277
ES.18895.29	chr2	-	6279	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	135	-656	-1	-145	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAGTTGGAATTCATT	5915	False	NA	2	True	AATAAA	-21	NA	34644438	34566340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.3	chr2	-	6428	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	6	intron_retention	FALSE	canonical	2	3	junction_25	59.3479360617781	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGGCTCTTTTCTGTGG	5916	False	NA	-1	True	AATAAA	-21	NA	34644437	34566189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34638047_34638110_34644277
ES.18895.33	chr2	-	6975	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	0	-147	intron_retention	FALSE	canonical	0	0	junction_25	62.165757141265	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5930	False	NA	0	True	AATAAA	-19	NA	34644423	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34623906_34624620_34644277
ES.18895.34	chr2	-	6319	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	35	-147	intron_retention	FALSE	canonical	1	1	junction_25	62.2799558398068	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5965	False	NA	0	True	AATAAA	-19	NA	34644388	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34642682_34642775_34644277
ES.18895.35	chr2	-	6176	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	4	-147	intron_retention	FALSE	canonical	2	3	junction_24	69.4763959917323	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5934	False	NA	0	True	AATAAA	-19	NA	34644419	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34638047_34638110_34644277
ES.18895.36	chr2	-	13281	23	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	-12	-147	intron_retention	FALSE	canonical	2	111	junction_15	28.3102644703324	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5904	False	NA	0	True	AATAAA	-19	NA	34644449	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.37	chr2	-	6325	27	NIC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	18	-147	intron_retention	FALSE	canonical	2	6	junction_20	60.4215957317351	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5948	False	NA	0	True	AATAAA	-19	NA	34644405	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.38	chr2	-	6387	28	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	17	-147	intron_retention	FALSE	canonical	0	0	junction_18	76.1256992417673	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5947	False	NA	0	True	AATAAA	-19	NA	34644406	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34606274_34606423_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34644277
ES.18895.39	chr2	-	6412	29	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	-2	-147	intron_retention	FALSE	canonical	1	1	junction_26	75.7085577348143	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5928	False	NA	0	True	AATAAA	-19	NA	34644425	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34638047_34638110_34642682_34642775_34644277
ES.18895.4	chr2	-	6371	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	130	-806	-6	5	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGGCTCTTTTCTGTG	5910	False	NA	-2	True	AATAAA	-20	NA	34644443	34566190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.40	chr2	-	7676	2	ISM	ENSMUSG00000026867.20	ENSMUST00000138203.2	705	4	32	-1563	32	-147	intron_retention	FALSE	canonical	3	242	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	NA	False	NA	0	True	AATAAA	-19	NA	34574273	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34568190_34568444
ES.18895.43	chr2	-	6346	28	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	35	-147	intron_retention	FALSE	canonical	1	1	junction_26	69.7674168607265	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAATAGTTGGAATTCA	5965	False	NA	0	True	AATAAA	-19	NA	34644388	34566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34638047_34638110_34644277
ES.18895.48	chr2	-	6229	26	NIC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	0	-151	intron_retention	FALSE	canonical	0	0	junction_14	50.8787421228159	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	5916	False	NA	-4	True	AATAAA	-15	NA	34644437	34566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.5	chr2	-	6809	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	8	5	intron_retention	FALSE	canonical	2	2	junction_26	49.6167560931496	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGGCTCTTTTCTGTG	5117	False	NA	-2	True	AATAAA	-20	NA	34645236	34566190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277_34644572_34644989
ES.18895.50	chr2	-	5908	28	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	-3	-151	intron_retention	FALSE	canonical	0	0	junction_25	69.1094041311962	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	5927	False	NA	-4	True	AATAAA	-15	NA	34644426	34566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34618485_34618918_34619187_34620474_34620693_34644277
ES.18895.51	chr2	-	6266	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	4	-151	intron_retention	FALSE	non_canonical	0	0	junction_6	68.7956948735609	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	5934	False	NA	-4	True	AATAAA	-15	NA	34644419	34566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581123_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.52	chr2	-	6079	25	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	35	-151	intron_retention	FALSE	canonical	2	8	junction_9	47.6447356308473	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	5965	False	NA	-4	True	AATAAA	-15	NA	34644388	34566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.53	chr2	-	5747	4	ISM	ENSMUSG00000026867.20	ENSMUST00000113101.8	2200	11	16572	-1148	-3521	-151	3prime_fragment	FALSE	canonical	3	220	junction_3	9.17726659862414	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	NA	False	NA	-4	True	AATAAA	-15	NA	34577826	34566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193
ES.18895.59	chr2	-	5588	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	90	28	intron_retention	FALSE	canonical	0	0	junction_14	69.358056062929	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTTGCGTTGTACA	6020	False	NA	NA	False	NA	NA	NA	34644333	34566968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34606274_34606423_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.6	chr2	-	6301	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	16	4	intron_retention	FALSE	canonical	2	2	junction_25	48.1584717365491	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCAGGGCTCTTTTCTGT	5946	False	NA	-3	True	AATAAA	-19	NA	34644407	34566191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620660_34644277
ES.18895.63	chr2	-	5570	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	55	18	intron_retention	FALSE	canonical	2	3	junction_25	59.3479360617781	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTGTAGTTTGGTTT	5985	False	NA	NA	False	NA	NA	NA	34644368	34566978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34638047_34638110_34644277
ES.18895.64	chr2	-	5164	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	111	483	-25	15	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTGTGAAATGGTT	5891	False	NA	NA	False	AATAAA	-35	NA	34644462	34567479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.65	chr2	-	5142	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	-1	13	intron_retention	FALSE	canonical	2	6	junction_20	58.6270430562108	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCTCTTGTGAAATGG	5929	False	NA	NA	False	AATAAA	-33	NA	34644424	34567481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.66	chr2	-	5204	28	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	7	10	intron_retention	FALSE	canonical	1	1	junction_27	68.9526785504863	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTCCCTCTTGTGAAA	5937	False	NA	NA	False	AATAAA	-30	NA	34644416	34567484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34638047_34638110_34642682_34642775_34644277
ES.18895.67	chr2	-	5071	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	136	488	0	10	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTCCCTCTTGTGAAA	5916	False	NA	NA	False	AATAAA	-30	NA	34644437	34567484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.68	chr2	-	5118	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_24	59.9926647389929	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGACATTCCCTCTT	5916	False	NA	NA	False	AATAAA	-24	NA	34644437	34567490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34619342_34619396_34620474_34620693_34644277
ES.18895.69	chr2	-	5171	27	NIC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	22	2	intron_retention	FALSE	canonical	2	6	junction_20	60.4215957317351	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTGTGACATTCCCTC	5952	False	NA	NA	False	AATAAA	-22	NA	34644401	34567492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.7	chr2	-	6511	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	-7	4	intron_retention	FALSE	non_canonical	0	0	junction_6	71.857528748697	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCAGGGCTCTTTTCTGT	5923	False	NA	-3	True	AATAAA	-19	NA	34644430	34566191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581118_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34642682_34642775_34644277
ES.18895.70	chr2	-	5164	28	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	75.7356423168562	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGCTGTGACATTCCC	5934	False	NA	NA	False	AATAAA	-20	NA	34644419	34567494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568645_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34638047_34638110_34644277
ES.18895.71	chr2	-	5914	28	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_16	78.4313457395258	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGCTGTGACATTCCC	5937	False	NA	NA	False	AATAAA	-20	NA	34644416	34567494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599271_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34623906_34624620_34642682_34642775_34644277
ES.18895.72	chr2	-	5117	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_25	60.1774619195337	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGGCTGTGACATTCC	5916	False	NA	NA	False	AATAAA	-19	NA	34644437	34567495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34624562_34624620_34644277
ES.18895.73	chr2	-	5772	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_25	60.4178864734373	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTAGGCTGTGACATTC	5916	False	NA	NA	False	AATAAA	-18	NA	34644437	34567496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34623906_34624620_34644277
ES.18895.75	chr2	-	5081	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	-7	-5	intron_retention	FALSE	canonical	0	0	junction_22	48.4767325631586	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAGTAGGCTGTGACA	5923	False	NA	NA	False	AATAAA	-15	NA	34644430	34567499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617195_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.76	chr2	-	4900	25	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	18	-5	intron_retention	FALSE	canonical	0	0	junction_13	61.575326497984	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAGTAGGCTGTGACA	5948	False	NA	NA	False	AATAAA	-15	NA	34644405	34567499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.77	chr2	-	5167	27	NNC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	4	-5	intron_retention	FALSE	canonical	0	0	junction_4	60.375268752388	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAGTAGGCTGTGACA	5934	False	NA	NA	False	AATAAA	-15	NA	34644419	34567499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34573695_34573825_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.79	chr2	-	6289	25	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_14	48.6675049870719	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAGTAGGCTGTGACA	5928	False	NA	NA	False	AATAAA	-15	NA	34644425	34567499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34620693_34644277
ES.18895.8	chr2	-	5588	17	ISM	ENSMUSG00000026867.20	ENSMUST00000113111.8	4543	19	3746	-3	-822	3	3prime_fragment	FALSE	canonical	2	155	junction_6	21.3701566150087	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCAGGGCTCTTTTCTG	NA	False	NA	-4	True	AATAAA	-18	NA	34603563	34566192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176
ES.18895.80	chr2	-	5000	26	NNC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	10	-5	intron_retention	FALSE	non_canonical	0	0	junction_14	61.6636035275267	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAGTAGGCTGTGACA	5940	False	NA	NA	False	AATAAA	-15	NA	34644413	34567499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596153_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620660_34644277
ES.18895.82	chr2	-	4532	24	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	-25	-6	intron_retention	FALSE	canonical	0	0	junction_5	52.2483526933457	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGAGTAGGCTGTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	34618984	34567500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579052_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342
ES.18895.83	chr2	-	5833	27	NNC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	-2	-6	intron_retention	FALSE	canonical	0	0	junction_25	62.165757141265	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGAGTAGGCTGTGAC	5914	False	NA	NA	False	AATAAA	-14	NA	34644439	34567500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34623906_34624620_34644277
ES.18895.86	chr2	-	4995	26	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_14	48.4618447853567	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAGAGTAGGCTGTGA	5932	False	NA	NA	False	AATAAA	-13	NA	34644421	34567501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596752_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.87	chr2	-	4976	25	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	-3	-7	intron_retention	FALSE	canonical	2	8	junction_9	47.6447356308473	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAGAGTAGGCTGTGA	5913	False	NA	NA	False	AATAAA	-13	NA	34644440	34567501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.88	chr2	-	5000	25	NIC	ENSMUSG00000026867.20	novel	5758	26	NA	NA	22	-7	intron_retention	FALSE	canonical	2	8	junction_9	50.1780164348227	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAGAGTAGGCTGTGA	5952	False	NA	NA	False	AATAAA	-13	NA	34644401	34567501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.9	chr2	-	6226	25	NIC	ENSMUSG00000026867.20	novel	5695	26	NA	NA	42	3	intron_retention	FALSE	canonical	2	8	junction_9	47.6447356308473	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCAGGGCTCTTTTCTG	5972	False	NA	-4	True	AATAAA	-18	NA	34644381	34566192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.90	chr2	-	4663	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	153	879	3	30	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTTTCTGAGTTGC	5933	False	NA	NA	False	NA	NA	NA	34644420	34567875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ES.18895.91	chr2	-	198	1	Intergenic	novelGene_15672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34577370	34577172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34577200_34577400
ES.18895.92	chr2	-	172	1	Intergenic	novelGene_15675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTAGGTAAAGT	NA	False	NA	NA	False	NA	NA	NA	34597512	34597340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34597300_34597500
ES.18895.93	chr2	-	2051	1	NIC	ENSMUSG00000026867.20	novel	2484	16	NA	NA	4958	4476	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAATATATGTATTCA	NA	False	NA	NA	False	NA	NA	NA	34613904	34611853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34611900_34613900
ES.18895.94	chr2	-	6220	2	NNC	ENSMUSG00000026867.20	novel	2207	4	NA	NA	584	4476	intron_retention	TRUE	non_canonical	0	0	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAATATATGTATTCA	NA	False	NA	NA	False	NA	NA	NA	34618278	34611853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34613781_34613985
ES.18896.1	chr2	+	2578	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	77	1017	-48	-1	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCAGGTGTGTCTTTCT	NA	False	NA	17	True	ACTAAA	-13	NA	34662058	34666542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.10	chr2	+	2240	10	NNC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-3	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	841.246356365818	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGGTCTAATTTTTGT	NA	False	NA	21	True	AATAAA	-12	NA	34662103	34666466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562_34665955_34666171
ES.18896.11	chr2	+	2929	7	NIC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	-3	-66	intron_retention	FALSE	canonical	3	2314	junction_2	227.852839935487	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTGTGAAAAGTTTGT	NA	False	NA	32	True	AATAAA	-23	NA	34662103	34666477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662459_34662570_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.13	chr2	+	2858	7	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-2	74	-2	-74	intron_retention	FALSE	canonical	3	2314	junction_3	231.215628076189	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCTAATTTTTGTGAA	NA	False	NA	24	True	AATAAA	-15	NA	34662104	34666469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077
ES.18896.14	chr2	+	2550	8	NIC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-2	-77	intron_retention	FALSE	canonical	3	1920	junction_1	306.965197788057	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGGTCTAATTTTTGT	NA	False	NA	21	True	AATAAA	-12	NA	34662104	34666466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.15	chr2	+	2674	7	NIC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-2	-69	intron_retention	FALSE	canonical	3	1920	junction_1	331.560284446467	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTTTTGTGAAAAGTT	NA	False	NA	29	True	AATAAA	-20	NA	34662104	34666474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34664785_34665077_34665246_34665562
ES.18896.17	chr2	+	1829	7	NNC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-2	-76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1018.36984386267	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTCTAATTTTTGTG	NA	False	NA	22	True	AATAAA	-13	NA	34662104	34666467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34662159_34662240_34662276_34663907_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.2	chr2	+	3055	5	NIC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	-17	-78	intron_retention	FALSE	canonical	3	2314	junction_3	150.645901039491	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTGGTCTAATTTTTG	NA	False	NA	20	True	AATAAA	-11	NA	34662089	34666465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34665246_34665562
ES.18896.20	chr2	+	2335	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	125	1212	0	-196	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTGGGTCAGGGTGT	NA	False	NA	-98	True	TTTAAA	-8	NA	34662106	34666347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.21	chr2	+	3983	2	ISM	ENSMUSG00000026864.14	ENSMUST00000145466.2	720	3	-486	-2264	0	-75	intron_retention	FALSE	canonical	3	2444	junction_1	0	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTAATTTTTGTGA	NA	False	NA	23	True	AATAAA	-14	NA	34662106	34666468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34662803_34663181
ES.18896.22	chr2	+	3754	4	NIC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	0	-76	intron_retention	FALSE	canonical	3	2444	junction_2	13.3666251038423	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTCTAATTTTTGTG	NA	False	NA	22	True	AATAAA	-13	NA	34662106	34666467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662459_34662570_34662803_34663181_34664431_34664546
ES.18896.24	chr2	+	2445	6	NIC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	2	-76	intron_retention	FALSE	canonical	0	0	junction_1	1072.645440022	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTCTAATTTTTGTG	NA	False	NA	22	True	AATAAA	-13	NA	34662108	34666467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662159_34662570_34662803_34663181_34663320_34663832_34664785_34665077_34665246_34665562
ES.18896.25	chr2	+	2261	7	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	463	1	-23	-1	3prime_fragment	FALSE	canonical	3	2314	junction_2	230.566994361485	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCAGGTGTGTCTTTCT	NA	False	NA	17	True	ACTAAA	-13	NA	34662569	34666542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.3	chr2	+	2618	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	-2	-3	2	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTGTGTCTTTCTTCG	NA	False	NA	20	True	ACTAAA	-16	NA	34662103	34666545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.4	chr2	+	2977	8	NIC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-3	-70	intron_retention	FALSE	canonical	3	1920	junction_1	315.959956129809	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAATTTTTGTGAAAAGT	NA	False	NA	28	True	AATAAA	-19	NA	34662103	34666473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.6	chr2	+	2534	8	NNC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	-3	-76	intron_retention	FALSE	non_canonical	0	0	junction_7	927.502615651738	1385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTCTAATTTTTGTG	NA	False	NA	22	True	AATAAA	-13	NA	34662103	34666467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665240_34665562
ES.18896.7	chr2	+	2869	7	NIC	ENSMUSG00000026864.14	novel	3672	9	NA	NA	-3	-76	intron_retention	FALSE	canonical	3	1920	junction_1	312.272539440933	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTCTAATTTTTGTG	NA	False	NA	22	True	AATAAA	-13	NA	34662103	34666467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34664431_34664546_34664785_34665077
ES.18896.8	chr2	+	3180	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	-3	-564	-3	-452	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTACCCACAGGCCTGTG	NA	False	NA	NA	False	AATATA	-19	NA	34662103	34667107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18896.9	chr2	+	2404	7	NIC	ENSMUSG00000026864.14	novel	2613	8	NA	NA	-3	-74	intron_retention	FALSE	canonical	1	91	junction_2	984.799810452189	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCTAATTTTTGTGAA	NA	False	NA	24	True	AATAAA	-15	NA	34662103	34666469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34662459_34662570_34662803_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ES.18897.1	chr2	+	172	1	Intergenic	novelGene_15682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCGAGTCAGGGA	NA	False	NA	NA	False	NA	NA	NA	34672216	34672388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34672200_34672400
ES.18898.1	chr2	+	281	1	Intergenic	novelGene_15683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAATAAAGACA	NA	False	NA	NA	False	NA	NA	NA	34682330	34682611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34682300_34682600
ES.18898.2	chr2	+	176	1	Intergenic	novelGene_15684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAGAGG	NA	False	NA	NA	False	NA	NA	NA	34682331	34682507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34682300_34682500
ES.18899.1	chr2	+	5394	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAAACCATGAATGTC	NA	False	NA	NA	False	AAGAAA	-43	NA	34692325	34697719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34692300_34697700
ES.189.1	chr1	-	2372	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-83	0	-83	0	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTATTTGTGGGTTTT	NA	False	NA	-2	True	ATTAAA	-17	NA	23961481	23884705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.10	chr1	-	4779	8	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-63	-4	intron_retention	FALSE	canonical	3	380	junction_4	36.2367498655209	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCTTTTTATTTGTGGG	NA	False	NA	-6	True	ATTAAA	-13	NA	23961461	23884709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.11	chr1	-	2320	10	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-63	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.696481391698	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACCTTTTTATTTGTGG	NA	False	NA	-7	True	ATTAAA	-12	NA	23961461	23884710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23887344_23887653_23888410_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.12	chr1	-	2351	10	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-60	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	135.99355467661	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACCTTTTTATTTGTGG	NA	False	NA	-7	True	ATTAAA	-12	NA	23961458	23884710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915538_23916789_23916876_23930940_23931075_23961118
ES.189.14	chr1	-	2430	11	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-64	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	171.383225550227	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACACCTTTTTATTTGT	NA	False	NA	-9	True	ATTAAA	-10	NA	23961462	23884712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23897348_23897433_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.16	chr1	-	1243	4	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	56218	-452	-5694	-219	3prime_fragment	FALSE	canonical	3	386	junction_1	18.3726850393609	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCATTGCCTCTTGT	NA	False	NA	NA	False	GATAAA	-42	NA	23892552	23884924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503
ES.189.17	chr1	-	3431	9	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-63	50	intron_retention	FALSE	canonical	3	380	junction_5	34.5631216038135	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGTGTGGAGGGCAGC	NA	False	NA	NA	False	ATTAAA	-26	NA	23961461	23885326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.18	chr1	-	1740	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-75	624	-75	47	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATCTGTGTGGAGGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	23961473	23885329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.19	chr1	-	1255	8	ISM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	-51	3516	-51	-346	5prime_fragment	FALSE	canonical	3	380	junction_4	36.2367498655209	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTTTATTCACTTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	23961449	23888221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.20	chr1	-	1894	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAACAAGGAATGCAC	NA	False	NA	NA	False	NA	NA	NA	23937464	23935570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_23935600_23937500
ES.189.3	chr1	-	2457	11	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-60	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	200.580557382813	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	-5	True	ATTAAA	-14	NA	23961458	23884708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23910518_23910600_23915454_23915538_23916789_23916899_23930940_23931075_23961118
ES.189.5	chr1	-	2473	11	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.329282003936	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	-5	True	ATTAAA	-14	NA	23961462	23884708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23886799_23886923_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.6	chr1	-	2434	11	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-67	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	170.714498505546	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	-5	True	ATTAAA	-14	NA	23961465	23884708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23910518_23910600_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.7	chr1	-	2356	10	NNC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-81	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	136.907195745562	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	-5	True	ATTAAA	-14	NA	23961479	23884708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892514_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.189.8	chr1	-	4096	9	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-110	-3	intron_retention	FALSE	canonical	3	380	junction_5	34.5631216038135	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTTATTTGTGGGT	NA	False	NA	-5	True	ATTAAA	-14	NA	23961508	23884708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ES.1890.1	chr1	-	2202	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	13	4	13	0	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115551	171109522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.10	chr1	-	2648	10	NIC	ENSMUSG00000053483.16	novel	2091	12	NA	NA	11	0	intron_retention	FALSE	canonical	3	297	junction_8	47.2168624409271	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115517	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.11	chr1	-	2470	11	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	122.45362387451	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115551	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.12	chr1	-	2900	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_3	120.640919280975	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115510	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171114544_171115334
ES.1890.13	chr1	-	2104	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-14	0	intron_retention	FALSE	canonical	3	16	junction_10	116.277453880758	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115511	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171114183_171114544_171115334
ES.1890.14	chr1	-	2124	13	NNC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.48606432343	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115499	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171109877_171110070_171110169_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.15	chr1	-	2114	13	NNC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	152.454546960361	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115531	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111269_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.18	chr1	-	2047	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	5	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	159.598618440964	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115492	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.19	chr1	-	2555	11	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	297	junction_9	49.3615234772996	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115505	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.2	chr1	-	2146	13	NNC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.920794652714	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115510	171109522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110603_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.20	chr1	-	2094	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-15	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	156.020077114485	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115512	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113922_171114544_171115334
ES.1890.21	chr1	-	3508	6	NIC	ENSMUSG00000053483.16	novel	2091	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	297	junction_4	52.8113624137836	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115511	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171111600_171112150_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.22	chr1	-	1661	10	NNC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	171.193270318868	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115539	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112173_171114012_171114544_171115334
ES.1890.23	chr1	-	3918	10	NIC	ENSMUSG00000053483.16	novel	2278	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	331	junction_3	38.5528337175664	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115525	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114
ES.1890.24	chr1	-	4361	8	NIC	ENSMUSG00000053483.16	novel	2091	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	357	junction_7	32.8956296334269	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115512	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114
ES.1890.25	chr1	-	2367	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	297	junction_10	47.5590976427754	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115513	171109531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.1890.26	chr1	-	1941	3	NIC	ENSMUSG00000053483.16	novel	2091	12	NA	NA	-58	-1	intron_retention	FALSE	canonical	3	366	junction_2	37.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAAGTGATGTTCA	1731	False	NA	NA	False	AATAAA	-6	NA	171112218	171109532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171111600_171112150
ES.1890.27	chr1	-	5424	4	Fusion	ENSMUSG00000062963.11_ENSMUSG00000053483.16	novel	914	6	NA	NA	176	29	intron_retention	FALSE	canonical	3	530	junction_1	32.9545141065682	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGGAAGGAAGGGAG	7543	False	NA	NA	False	NA	NA	NA	171122337	171112006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_171117168_171117456_171117521_171117721_171117790_171122206
ES.1890.28	chr1	-	2752	2	FSM	ENSMUSG00000053483.16	ENSMUST00000153164.2	2706	2	-17	-29	15	29	multi-exon	FALSE	canonical	3	442	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGGAAGGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	171115549	171112006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171114544_171115334
ES.1890.29	chr1	-	977	2	FSM	ENSMUSG00000053483.16	ENSMUST00000153164.2	2706	2	-16	1745	16	-1276	multi-exon	FALSE	canonical	3	442	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTCTAGATCTTAT	NA	False	NA	NA	False	NA	NA	NA	171115548	171113780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171114544_171115334
ES.1890.30	chr1	-	5578	5	NIC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	257	junction_4	151.682233633343	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7330	False	NA	0	True	AATAAA	-18	NA	171122550	171116135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171122401_171122493
ES.1890.31	chr1	-	978	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	28	1	-9	-1	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGTTCTCATTGAT	7311	False	NA	-1	True	AATAAA	-17	NA	171122569	171116136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ES.1890.32	chr1	-	5380	6	NIC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	257	junction_5	139.210057107955	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGTTCTCATTGAT	7326	False	NA	-1	True	AATAAA	-17	NA	171122554	171116136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171122401_171122493
ES.1890.33	chr1	-	1023	6	ISM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	22	-130	21	-1	3prime_fragment	FALSE	canonical	3	36	junction_3	231.021211147375	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGTTCTCATTGAT	7388	False	NA	-1	True	AATAAA	-17	NA	171122492	171116136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206
ES.1890.36	chr1	-	2536	1	NIC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	-660	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGTGGTTCTCATTGA	NA	False	NA	-2	True	AATAAA	-16	NA	171118673	171116137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171116100_171118700
ES.1890.37	chr1	-	2637	1	NIC	ENSMUSG00000062963.11	novel	1007	7	NA	NA	170	-3357	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAATTTGGGCTGGGGCT	7537	False	NA	NA	False	NA	NA	NA	171122343	171119706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171119700_171122300
ES.1890.4	chr1	-	3279	10	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	133.348332489678	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115518	171109522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171114544_171115334
ES.1890.5	chr1	-	1915	13	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	1	3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	150.066721272017	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGATGTTCATGTT	NA	False	NA	NA	False	AATAAA	-10	NA	171115531	171109528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171114183_171114544_171115334
ES.1890.6	chr1	-	2012	13	NNC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	123	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	152.02567400132	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGATGTTCATGTT	NA	False	NA	NA	False	AATAAA	-10	NA	171115374	171109528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112303_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ES.18900.1	chr2	+	3001	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAAGCATCAGGTACAAC	NA	False	NA	NA	False	GATAAA	-9	NA	34699295	34702296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34699300_34702300
ES.18900.2	chr2	+	5691	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCGCTGTTTGTTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	34699679	34705370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34699700_34705400
ES.18901.1	chr2	+	188	1	Intergenic	novelGene_15688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAACTGCAAAACAT	NA	False	NA	NA	False	NA	NA	NA	34708864	34709052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34708900_34709100
ES.18902.1	chr2	+	2733	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCATGGAATGCTCAAC	NA	False	NA	NA	False	NA	NA	NA	34711368	34714101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_34711400_34714100
ES.18903.1	chr2	-	2289	8	NNC	ENSMUSG00000070953.14	novel	600	5	NA	NA	-25	4144	intron_retention	FALSE	canonical	1	2	junction_1	142.863428433149	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGAAAGGTTT	2770	False	NA	NA	False	NA	NA	NA	34689791	34663423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34664852_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.10	chr2	-	1458	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	6	-33	6	13	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAACTCTGCC	2827	False	NA	-9	True	AATAAA	-30	NA	34689734	34669215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ES.18903.11	chr2	-	1185	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	122	1661	-36	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2759	False	NA	-22	True	AATAAA	-17	NA	34689802	34669228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.12	chr2	-	2053	7	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	258	junction_6	67.9362446219493	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	2761	False	NA	-23	True	AATAAA	-16	NA	34689800	34669229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34669542_34670608_34670759_34674557_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.13	chr2	-	1081	9	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	140.140108462924	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	2778	False	NA	-23	True	AATAAA	-16	NA	34689783	34669229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34669542_34670608_34670648_34670731_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.15	chr2	-	2669	8	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-2863	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	181.187691612418	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	NA	False	NA	-23	True	AATAAA	-16	NA	34692787	34669229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34687386_34687446_34689762_34690005_34691346
ES.18903.17	chr2	-	3210	7	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	258	junction_6	67.934813526563	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	2778	False	NA	-23	True	AATAAA	-16	NA	34689783	34669229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34687446_34689762
ES.18903.18	chr2	-	1312	7	NIC	ENSMUSG00000070953.14	novel	1431	8	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	160.524141486569	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	2809	False	NA	-23	True	AATAAA	-16	NA	34689752	34669229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34669542_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ES.18903.2	chr2	-	2847	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	141	-20	-17	20	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCATTGATCATATAGA	2778	False	NA	NA	False	AATAAA	-30	NA	34689783	34667547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.21	chr2	-	1172	8	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	138.721568147811	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTGACTTTTTACAA	2761	False	NA	-25	True	AATAAA	-14	NA	34689800	34669231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34669534_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.22	chr2	-	1108	8	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	144.938832981787	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTGTGACTTTTTACA	2761	False	NA	-26	True	AATAAA	-13	NA	34689800	34669232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685271_34687386_34687446_34689762
ES.18903.23	chr2	-	1089	7	ISM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	123	2823	-35	-951	5prime_fragment	FALSE	canonical	3	258	junction_6	62.8792935357543	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTGTTTTTTTTTTGT	2760	False	NA	NA	False	NA	NA	NA	34689801	34670390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.24	chr2	-	168	1	Intergenic	novelGene_15685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	9599	False	NA	NA	False	NA	NA	NA	34682962	34682794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34682800_34683000
ES.18903.25	chr2	-	222	1	Intergenic	novelGene_15686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCTATGGGAGCTTTC	1220	False	NA	NA	False	NA	NA	NA	34691341	34691119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34691100_34691300
ES.18903.26	chr2	-	356	1	Intergenic	novelGene_15687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTTGGTTGGTTT	545	False	NA	-10	True	AAAACA	-4	NA	34692016	34691660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34691700_34692000
ES.18903.3	chr2	-	3515	9	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-2906	-336	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	139.840031375139	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	NA	False	NA	0	True	AATAAA	-18	NA	34692830	34667903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762_34690005_34692027
ES.18903.4	chr2	-	2774	8	NIC	ENSMUSG00000070953.14	novel	1431	8	NA	NA	6	-336	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	164.821486611969	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	2827	False	NA	0	True	AATAAA	-18	NA	34689734	34667903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689434
ES.18903.6	chr2	-	2331	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-22	-498	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACGGGGTGGGGGTGA	2773	False	NA	NA	False	NA	NA	NA	34689788	34668065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18903.7	chr2	-	1225	9	NNC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	-22	569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.679525206124	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGTGCATG	2773	False	NA	NA	False	NA	NA	NA	34689788	34668659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34668691_34669209_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689762
ES.18903.8	chr2	-	1710	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	135	1123	-23	538	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGTAAAAAAA	2772	False	NA	NA	False	NA	NA	NA	34689789	34668690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ES.18904.1	chr2	-	3077	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	14	-1168	1	341	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGCTTTGTTTTAAAAAAAA	9215	False	NA	NA	False	NA	NA	NA	34716228	34694184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.10	chr2	-	1834	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	5	-1	0	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9201	False	NA	-3	True	ATTAAA	-15	NA	34716242	34695349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.11	chr2	-	1915	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	11	-3	-2	0	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9212	False	NA	-3	True	ATTAAA	-15	NA	34716231	34695349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.12	chr2	-	4781	7	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	239	junction_6	77.4627150455122	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	9240	False	NA	-3	True	ATTAAA	-15	NA	34716203	34695349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34716083_34716183
ES.18904.13	chr2	-	2191	8	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	121.468900865823	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTTTGTTCTTTGAAA	9215	False	NA	-6	True	ATTAAA	-12	NA	34716228	34695352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715691_34716083_34716183
ES.18904.14	chr2	-	2230	8	NNC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	154.466824917197	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	9224	False	NA	-7	True	ATTAAA	-11	NA	34716219	34695353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702777_34703022_34712569_34713080_34715691_34716083_34716183
ES.18904.15	chr2	-	2120	3	NNC	ENSMUSG00000035949.16	novel	1872	6	NA	NA	-635	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	146.5	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	False	NA	-7	True	ATTAAA	-11	NA	34699310	34695353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34696012_34697289_34698359_34698917
ES.18904.16	chr2	-	1757	7	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	139.795088134979	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	9232	False	NA	-7	True	ATTAAA	-11	NA	34716211	34695353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.17	chr2	-	3498	7	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	82	junction_5	115.917715068348	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	9231	False	NA	-7	True	ATTAAA	-11	NA	34716212	34695353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.18	chr2	-	5961	6	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	10	-3	intron_retention	FALSE	canonical	3	239	junction_5	79.6356703996394	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATAGCCTTTGTTCTTTG	9240	False	NA	-9	True	ATTAAA	-9	NA	34716203	34695355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.2	chr2	-	5063	3	ISM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	11602	-1165	-2916	341	intron_retention	FALSE	canonical	3	293	junction_1	15.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGCTTTGTTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34701591	34694184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34696012_34697289_34697460_34698525
ES.18904.20	chr2	-	1921	1	NIC	ENSMUSG00000035949.16	novel	2265	5	NA	NA	1388	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTTTCCAATAGCC	NA	False	NA	-20	True	CATAAA	-21	NA	34697287	34695366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34695400_34697300
ES.18904.21	chr2	-	6428	6	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	-1	-59	intron_retention	FALSE	canonical	3	239	junction_5	81.0693530256656	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCTAATTGGTTGCCC	9229	False	NA	-10	True	AGTAAA	-20	NA	34716214	34695411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34703022_34712569_34716083_34716183
ES.18904.22	chr2	-	2183	7	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	19	914	1	0	5prime_fragment	FALSE	canonical	3	82	junction_5	116.024422716369	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATAAGTTAACCTGTAG	9215	False	NA	NA	False	AATAAA	-18	NA	34716228	34696264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.23	chr2	-	2286	7	FSM	ENSMUSG00000035949.16	ENSMUST00000113075.8	2260	7	-26	0	3	0	multi-exon	FALSE	canonical	3	239	junction_6	77.5026881254235	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATAAGTTAACCTGTAG	9204	False	NA	NA	False	AATAAA	-18	NA	34716239	34696264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.24	chr2	-	4420	4	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	-23	-1926	intron_retention	FALSE	canonical	3	82	junction_2	161.085898410341	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTTACATTTGAGTG	9173	False	NA	NA	False	NA	NA	NA	34716270	34699215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.25	chr2	-	5420	3	NIC	ENSMUSG00000035949.16	novel	1930	4	NA	NA	-6	684	intron_retention	FALSE	canonical	3	239	junction_2	117.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGCGTGTTTTTAACT	9208	False	NA	6	True	AATAAA	-30	NA	34716235	34701166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34703022_34712569_34716083_34716183
ES.18904.28	chr2	-	2505	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	95	-670	1	670	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	9215	False	NA	-8	True	AATAAA	-16	NA	34716228	34701180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.3	chr2	-	3032	8	NNC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	3	319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.381543704527	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	9233	False	NA	NA	False	NA	NA	NA	34716210	34694206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713071_34715969_34716083_34716183
ES.18904.30	chr2	-	2670	4	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	10	670	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	190.653262932127	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	9240	False	NA	-8	True	AATAAA	-16	NA	34716203	34701180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34703022_34712569_34712988_34715691_34716083_34716183
ES.18904.31	chr2	-	5980	1	NIC	ENSMUSG00000035949.16	novel	2265	5	NA	NA	5772	670	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	NA	False	NA	-8	True	AATAAA	-16	NA	34707160	34701180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34701200_34707200
ES.18904.32	chr2	-	2784	4	NIC	ENSMUSG00000035949.16	novel	1930	4	NA	NA	2	670	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	180.965926811283	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGCAGTGACAGTGAA	9218	False	NA	-8	True	AATAAA	-16	NA	34716225	34701180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34703022_34712569_34713080_34715691_34716083_34716183
ES.18904.33	chr2	-	2395	4	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	35	5832	1	668	5prime_fragment	FALSE	canonical	3	82	junction_2	161.085898410341	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGATGCAGTGACAGTG	9231	False	NA	-10	True	AATAAA	-14	NA	34716212	34701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.34	chr2	-	1839	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	97	-6	1	6	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCAATATGTTATCTTC	9217	False	NA	NA	False	NA	NA	NA	34716226	34701844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.35	chr2	-	4719	3	NIC	ENSMUSG00000035949.16	novel	1930	4	NA	NA	0	-1	intron_retention	FALSE	canonical	3	239	junction_2	117.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCCAGCTCCAATATGT	9224	False	NA	NA	False	NA	NA	NA	34716219	34701851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34703022_34712569_34716083_34716183
ES.18904.36	chr2	-	1361	4	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	22	6879	2	-379	5prime_fragment	FALSE	canonical	3	82	junction_2	161.085898410341	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGTTCTTATTTAGAAA	9218	False	NA	NA	False	ATTAAA	-24	NA	34716225	34702229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.37	chr2	-	1441	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	95	394	1	-394	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTAATCT	9215	False	NA	NA	False	ATTAAA	-9	NA	34716228	34702244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.38	chr2	-	4396	2	ISM	ENSMUSG00000035949.16	ENSMUST00000145660.8	988	3	-9	-505	-9	-394	intron_retention	FALSE	canonical	3	474	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTAATCT	9255	False	NA	NA	False	ATTAAA	-9	NA	34716188	34702244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34703022_34712569
ES.18904.39	chr2	-	968	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	64	898	-12	1	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTCT	9184	False	NA	NA	False	NA	NA	NA	34716259	34702748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.4	chr2	-	5926	7	NIC	ENSMUSG00000035949.16	novel	1923	8	NA	NA	8	319	intron_retention	FALSE	canonical	3	239	junction_6	77.4627150455122	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	9238	False	NA	NA	False	NA	NA	NA	34716205	34694206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34716083_34716183
ES.18904.40	chr2	-	829	4	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	29	7404	1	-5	5prime_fragment	FALSE	canonical	3	82	junction_2	161.085898410341	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGGTTTTTTGTTTGTT	9225	False	NA	NA	False	NA	NA	NA	34716218	34702754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.41	chr2	-	5732	1	FSM	ENSMUSG00000035949.16	ENSMUST00000201806.2	4405	1	31	-1358	-9	1358	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTTCTTTCCAAGCTT	9255	False	NA	NA	False	AAAAAG	-35	NA	34716188	34710456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34710500_34716200
ES.18904.42	chr2	-	198	1	FSM	ENSMUSG00000035949.16	ENSMUST00000201806.2	4405	1	4238	-31	951	31	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTGACACAACAGTCAAA	NA	False	NA	NA	False	NA	NA	NA	34711981	34711783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34711800_34712000
ES.18904.5	chr2	-	2938	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	44	-1144	10	319	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	9240	False	NA	NA	False	NA	NA	NA	34716203	34694206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.6	chr2	-	2300	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	16	-478	-2	317	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTATTTAAAACTATT	9212	False	NA	NA	False	AATAAA	-16	NA	34716231	34694872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.7	chr2	-	2138	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	36	-336	2	175	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTGTCTGGCATTA	9232	False	NA	NA	False	GATAAA	-15	NA	34716211	34695014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ES.18904.8	chr2	-	2240	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	20	-337	-3	174	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGAGTGTCTGGCATT	9221	False	NA	NA	False	GATAAA	-14	NA	34716222	34695015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ES.18904.9	chr2	-	2116	8	NIC	ENSMUSG00000035949.16	novel	1838	8	NA	NA	1	14	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	128.342971632057	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAGCAAAGGTGCTA	9215	False	NA	11	True	ATTAAA	-29	NA	34716228	34695335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715691_34716083_34716183
ES.18905.1	chr2	+	2285	6	FSM	ENSMUSG00000026870.20	ENSMUST00000113068.9	2278	6	-6	-1	-6	0	multi-exon	FALSE	canonical	0	0	junction_5	0.8	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGAATTTACTTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	34764401	34782072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34764604_34772303_34772450_34775882_34775943_34777763_34777810_34778133_34778184_34780291
ES.18906.1	chr2	-	3770	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	11	-585	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	175.514974212571	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	34760963	34740330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.11	chr2	-	3435	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	13	intron_retention	FALSE	canonical	3	516	junction_3	37.7094152699296	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCGGCTGTGTGTCACT	NA	False	NA	-1	True	AATAAA	-27	NA	34760949	34742100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.13	chr2	-	1985	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-9	7	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	175.514974212571	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGTATTCCGGCTGTGT	NA	False	NA	-7	True	AATAAA	-21	NA	34760954	34742106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.14	chr2	-	1886	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTTGGTATTCCGGCT	NA	False	NA	-11	True	AATAAA	-17	NA	34760973	34742110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
ES.18906.15	chr2	-	5132	8	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	539	junction_5	32.6077491728952	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760947	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34750787_34753468_34753579_34755538_34756108_34756904_34757050_34760761
ES.18906.16	chr2	-	1997	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	236.684036921237	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760951	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755688_34755993_34756108_34756904_34757050_34760761
ES.18906.17	chr2	-	6232	8	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-10	2	intron_retention	FALSE	canonical	3	525	junction_5	35.5596652953647	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760955	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34744405_34746459_34746570_34747649_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.18	chr2	-	2321	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	7	2	intron_retention	FALSE	canonical	3	516	junction_4	37.4797862187073	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760938	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34756108_34756904_34757050_34760761
ES.18906.19	chr2	-	2015	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	182.470088873035	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760938	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755688_34755993_34756108_34756904_34757050_34760761
ES.18906.2	chr2	-	3795	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	15	587	-14	-587	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	34760959	34740332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.20	chr2	-	1508	6	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	234.993106281865	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGTTGGTATTCCGGC	NA	False	NA	-12	True	AATAAA	-16	NA	34760949	34742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34760761
ES.18906.21	chr2	-	3229	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	179.854261988855	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCGTTGGTATTCCGG	NA	False	NA	-13	True	AATAAA	-15	NA	34760951	34742112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34744068_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.23	chr2	-	2542	1	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	3048	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	9743	False	NA	-14	True	AATAAA	-14	NA	34744655	34742113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742100_34744700
ES.18906.24	chr2	-	4817	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	525	junction_6	35.8320736212684	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760960	34742113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.25	chr2	-	1874	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	-11	2534	-11	-166	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTTTTCCTTACCTG	NA	False	NA	-1	True	AATAAA	-36	NA	34760985	34742279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.26	chr2	-	1704	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	0	161	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCAACCACATTTTC	NA	False	NA	-15	True	AATAAA	-22	NA	34760974	34742293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
ES.18906.27	chr2	-	2015	11	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.316607400339	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTCTGGATTCTCT	NA	False	NA	-28	True	AATAAA	-9	NA	34760951	34742306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34743865_34744068_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.28	chr2	-	5675	8	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	130	intron_retention	FALSE	canonical	3	525	junction_5	29.2379401267795	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAATGAAGCCAA	NA	False	NA	-46	True	NA	NA	NA	34760949	34742324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.29	chr2	-	1881	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-330	130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	181.784025972486	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAATGAAGCCAA	NA	False	NA	-46	True	NA	NA	NA	34761304	34742324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34761028
ES.18906.3	chr2	-	3413	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	33	951	4	-951	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCTTTTGTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	34760941	34740696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.30	chr2	-	1664	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	194.540966122819	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAATGAAGCCAA	NA	False	NA	-46	True	NA	NA	NA	34760949	34742324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755993_34756108_34756904_34757050_34760761
ES.18906.31	chr2	-	1005	7	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	25	7920	-4	-5211	5prime_fragment	FALSE	canonical	3	516	junction_1	29.6390320729646	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTACAGAAGACAGGTTG	NA	False	NA	NA	False	AAAACA	-2	NA	34760949	34747665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.32	chr2	-	4573	1	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-6	572	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGACGGTAATTTATC	NA	False	NA	NA	False	NA	NA	NA	34760951	34756378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34756400_34761000
ES.18906.4	chr2	-	2978	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	25	1394	-4	974	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTTGGGAATTGAA	NA	False	NA	NA	False	AATATA	-28	NA	34760949	34741139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.5	chr2	-	1842	9	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	223.608474794673	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34760949	34742099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34760761
ES.18906.6	chr2	-	2086	11	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-9126	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	174.335423824305	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34774106	34742099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761_34760950_34774038
ES.18906.8	chr2	-	2012	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	183.290163267474	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34760949	34742099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744399_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ES.18906.9	chr2	-	1989	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	-5	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	268.885353512112	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGCTGTGTGTCACTG	NA	False	NA	0	True	AATAAA	-28	NA	34760950	34742099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753487_34753548_34755538_34755688_34755993_34756108_34756904_34757050_34760761
ES.18907.1	chr2	-	3907	15	NNC	ENSMUSG00000026873.10	novel	3741	15	NA	NA	-1025	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.07863990164374	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCTTGGAGCTGGCT	2612	False	NA	-12	True	ATTAAA	-33	NA	34805063	34783763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801818_34804869
ES.18907.2	chr2	-	3786	15	NNC	ENSMUSG00000026873.10	novel	3741	15	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.29691016521265	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGTCCTTGGAGCTGG	3629	False	NA	-14	True	ATTAAA	-31	NA	34804046	34783765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789610_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ES.18907.4	chr2	-	4385	14	NIC	ENSMUSG00000026873.10	novel	3741	15	NA	NA	-23	0	intron_retention	FALSE	canonical	3	18	junction_3	3.95836317854419	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGCGTGTCCTTGGAGC	3614	False	NA	-17	True	ATTAAA	-28	NA	34804061	34783768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ES.18907.6	chr2	-	3944	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-205	2	-155	-2	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAGCGTGTCCTTGGA	3482	False	NA	-19	True	ATTAAA	-26	NA	34804193	34783770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ES.18907.9	chr2	-	2050	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	-48	1739	2	-1712	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTATTGGTTCCTC	3639	False	NA	NA	False	NA	NA	NA	34804036	34785507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ES.18908.1	chr2	-	3015	10	NIC	ENSMUSG00000026875.15	novel	2325	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_9	3.30357083273745	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAGGTGTGAGACCACA	NA	False	NA	NA	False	AAAACA	-25	NA	34851609	34833267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34849526_34850832_34850900_34851535
ES.18908.2	chr2	-	2178	11	FSM	ENSMUSG00000026875.15	ENSMUST00000113064.8	2325	11	116	31	-59	-31	multi-exon	FALSE	canonical	1	1	junction_10	3.16385840391127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAAACAAATAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	34851668	34833300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849486_34849526_34850832_34850900_34851535
ES.18908.3	chr2	-	2081	10	NNC	ENSMUSG00000026875.15	novel	2325	11	NA	NA	-5	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.69517536629242	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCGACAAAACAAATAACAA	NA	False	NA	NA	False	NA	NA	NA	34851614	34833303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849559_34849626_34851535
ES.18908.5	chr2	-	1633	8	NNC	ENSMUSG00000026875.15	novel	2325	11	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	4.1206300291017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAGCA	4	True	NA	NA	False	NA	NA	NA	34851557	34837546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848624_34849396_34849526_34850832_34850900_34851535
ES.18909.1	chr2	+	175	1	Intergenic	novelGene_15689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCCAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	34870608	34870783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34870600_34870800
ES.1891.1	chr1	+	181	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACAAAACAAAAAAA	7857	False	NA	NA	False	NA	NA	NA	171133959	171134140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171134000_171134100
ES.18910.1	chr2	-	158	1	Intergenic	novelGene_15690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGTAAAAATGGAA	NA	False	NA	NA	False	NA	NA	NA	34888212	34888054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34888100_34888200
ES.18911.1	chr2	+	551	2	Intergenic	novelGene_15691	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGATTGAGTCTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	34956827	34958756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_34957071_34958448
ES.18912.1	chr2	-	2159	12	NNC	ENSMUSG00000026874.11	novel	5445	41	NA	NA	-5832	-39157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.15708382375981	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATGTGTCGTTGAATT	7633	False	NA	NA	False	NA	NA	NA	34957282	34924132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_34924624_34925967_34926154_34926266_34926383_34927612_34927740_34929222_34929338_34929682_34929774_34933199_34933283_34935274_34935367_34935881_34935953_34940415_34940579_34947254_34947448_34956851
ES.18913.1	chr2	-	184	1	Intergenic	novelGene_15692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGTATATATAAAACTG	NA	False	NA	NA	False	NA	NA	NA	34970022	34969838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_34969800_34970000
ES.18914.1	chr2	+	6766	2	NNC	ENSMUSG00000057110.16	novel	2734	11	NA	NA	-9424	-21090	intron_retention	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCGGCGTCCGGACCGAG	NA	False	NA	NA	False	NA	NA	NA	34990079	34999649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34996095_34998898
ES.18914.12	chr2	+	11133	41	NIC	ENSMUSG00000057110.16	novel	7085	44	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_26	35.4491184657672	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTCATCCGCAGGT	NA	False	NA	11	True	AATAAA	-14	NA	34999512	35068823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.13	chr2	+	4377	22	ISM	ENSMUSG00000057110.16	ENSMUST00000156933.8	7189	43	14	27759	14	2680	5prime_fragment	FALSE	canonical	3	34	junction_10	27.6467020827878	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTTCCAAAGGTTAAA	NA	False	NA	NA	False	NA	NA	NA	34999517	35040363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457
ES.18914.15	chr2	+	3775	22	ISM	ENSMUSG00000057110.16	ENSMUST00000156933.8	7189	43	15	28360	15	2079	5prime_fragment	FALSE	canonical	3	34	junction_10	27.6467020827878	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCTTGCCTTTTTATGG	NA	False	NA	NA	False	NA	NA	NA	34999518	35039762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457
ES.18914.16	chr2	+	7458	43	NIC	ENSMUSG00000057110.16	novel	7615	44	NA	NA	18	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	32.2496286606968	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATCCGCAGGTTAC	NA	False	NA	14	True	AATAAA	-17	NA	34999521	35068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34999642_35001566_35001815_35003335_35003467_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.17	chr2	+	3533	11	FSM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	23	-822	23	822	multi-exon	FALSE	canonical	3	34	junction_10	5.89576118919347	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTGTTTTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34999526	35021561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
ES.18914.18	chr2	+	7411	43	NIC	ENSMUSG00000057110.16	novel	7615	44	NA	NA	35	26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	31.850780559073	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAATATCCCAGTCAT	NA	False	NA	48	True	NA	NA	NA	34999538	35068860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.19	chr2	+	2692	11	NNC	ENSMUSG00000057110.16	novel	2116	11	NA	NA	207	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5931490775638	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTATTCTTACTG	NA	False	NA	NA	False	TATAAA	-22	NA	34999837	35020746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34999927_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
ES.18914.2	chr2	+	7636	44	FSM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	-21	0	-21	0	multi-exon	FALSE	canonical	3	34	junction_10	30.4342289721856	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	34999482	35068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.20	chr2	+	6631	38	ISM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	13167	8	-4722	3	3prime_fragment	FALSE	canonical	3	34	junction_4	27.0938363444484	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATCCGCAGGTTAC	NA	False	NA	14	True	AATAAA	-17	NA	35012670	35068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.21	chr2	+	5790	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-112	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5853342889216	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAACTAACCTCATCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	35022133	35068172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35022980_35023125_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043171_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050
ES.18914.22	chr2	+	5966	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-51	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	20.7397623189571	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	21	True	AATAAA	-24	NA	35022194	35068833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.24	chr2	+	1813	9	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	33.7268439080801	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGAGTCTGTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	35022212	35037682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246
ES.18914.25	chr2	+	5837	33	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	31.6148699190745	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35022231	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35022426_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.26	chr2	+	8014	33	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-13	0	intron_retention	FALSE	canonical	3	58	junction_1	20.5668688367967	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022232	35068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.27	chr2	+	6072	35	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5930426086613	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022233	35068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35022980_35023125_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.28	chr2	+	6453	33	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-10	0	intron_retention	FALSE	canonical	3	58	junction_1	19.4707312394784	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022235	35068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35066335_35068050_35068123_35068408
ES.18914.29	chr2	+	10009	30	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-10	2	intron_retention	FALSE	canonical	0	0	junction_10	28.3896365342107	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35022235	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038765_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35061259_35061849_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.3	chr2	+	2563	11	FSM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	-7	178	-7	-178	multi-exon	FALSE	canonical	3	34	junction_10	5.89576118919347	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGGAATCAGAATGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	34999496	35020561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
ES.18914.30	chr2	+	2642	14	NNC	ENSMUSG00000057110.16	novel	3148	18	NA	NA	-1	6001	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	16.6853938180645	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGACATTTGAGTTTT	NA	False	NA	NA	False	TATAAA	-16	NA	35022244	35043684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168
ES.18914.31	chr2	+	5821	35	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	26.5426633135891	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35022244	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043251_35043337_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.32	chr2	+	5786	33	ISM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	24464	9	1698	2	3prime_fragment	FALSE	canonical	3	72	junction_7	19.5041812424285	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35023967	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.34	chr2	+	4262	24	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	3773	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_18	28.6824739173402	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35038880	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063034_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.35	chr2	+	4263	24	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	3807	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.9873949574268	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATCCGCAGGTTAC	NA	False	NA	14	True	AATAAA	-17	NA	35038914	35068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050504_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.36	chr2	+	4132	23	ISM	ENSMUSG00000057110.16	ENSMUST00000113037.10	5970	34	17209	1	4347	-1	3prime_fragment	FALSE	canonical	3	73	junction_5	21.1031018831571	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	21	True	AATAAA	-24	NA	35039454	35068833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.37	chr2	+	5259	21	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	5822	0	intron_retention	FALSE	canonical	3	73	junction_4	19.080028825974	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTCATCCGCAGGT	NA	False	NA	11	True	AATAAA	-14	NA	35040929	35068823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35066335_35068050_35068123_35068408
ES.18914.38	chr2	+	3784	21	ISM	ENSMUSG00000057110.16	ENSMUST00000113037.10	5970	34	20921	9	-7153	2	3prime_fragment	FALSE	canonical	3	73	junction_3	20.0850690812852	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35043166	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.39	chr2	+	4340	19	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-7017	2	intron_retention	FALSE	canonical	3	73	junction_3	18.3014031709236	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35043302	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35066335_35068050_35068123_35068408
ES.18914.4	chr2	+	7228	42	NIC	ENSMUSG00000057110.16	novel	7615	44	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.4318896775907	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTCATCCGCAGG	NA	False	NA	10	True	AATAAA	-13	NA	34999499	35068822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_34999642_35003335_35003467_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.40	chr2	+	7271	16	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-2146	-3	intron_retention	FALSE	canonical	3	81	junction_2	19.0396078390987	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCGCAGGTTACCTTTA	NA	False	NA	19	True	AATAAA	-22	NA	35048173	35068831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.41	chr2	+	3548	14	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	295	-1	intron_retention	FALSE	canonical	3	96	junction_3	16.4482333002127	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	21	True	AATAAA	-24	NA	35052037	35068833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.42	chr2	+	2760	11	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	3915	-1	intron_retention	FALSE	canonical	3	96	junction_4	14.9278263655497	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	False	NA	21	True	AATAAA	-24	NA	35055657	35068833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35066335_35068050_35068123_35068408
ES.18914.43	chr2	+	3049	6	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-5005	2	intron_retention	FALSE	canonical	0	0	junction_1	51.0019607466223	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	35060254	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35061259_35061854_35062056_35063028_35063170_35065120_35066335_35068050_35068123_35068408
ES.18914.44	chr2	+	5480	4	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-4501	-3	intron_retention	FALSE	canonical	3	136	junction_2	1.69967317119759	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCGCAGGTTACCTTTA	NA	False	NA	19	True	AATAAA	-22	NA	35060758	35068831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35061259_35061849_35066335_35068050_35068123_35068408
ES.18914.45	chr2	+	4493	3	NIC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	-3615	3	intron_retention	FALSE	canonical	3	103	junction_1	16.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATCCGCAGGTTAC	NA	False	NA	14	True	AATAAA	-17	NA	35061644	35068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35062056_35063028_35066335_35068050
ES.18914.5	chr2	+	3482	19	ISM	ENSMUSG00000057110.16	ENSMUST00000156933.8	7189	43	1	30439	1	0	5prime_fragment	FALSE	canonical	3	34	junction_10	27.5479380151925	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGAGTCTGTCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	34999504	35037683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243
ES.18914.6	chr2	+	7596	44	NNC	ENSMUSG00000057110.16	novel	7085	44	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_18	34.6187455667982	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCATCCGCAGGTTAC	NA	False	NA	14	True	AATAAA	-17	NA	34999505	35068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063034_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.7	chr2	+	7573	44	NNC	ENSMUSG00000057110.16	novel	7615	44	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.301687025984	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	34999506	35068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019668_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18914.9	chr2	+	7467	43	NNC	ENSMUSG00000057110.16	novel	7615	44	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	37.6094698476623	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCATCCGCAGGTTA	NA	False	NA	13	True	AATAAA	-16	NA	34999507	35068825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057744_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063034_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ES.18915.1	chr2	-	186	1	Intergenic	novelGene_15693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAAGT	2114	False	NA	NA	False	NA	NA	NA	35011558	35011372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_35011400_35011600
ES.18916.1	chr2	-	180	1	Intergenic	novelGene_15694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGCTAGTTCA	5693	False	NA	NA	False	NA	NA	NA	35063580	35063400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_35063400_35063600
ES.18917.1	chr2	-	4386	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	144	-1449	0	1449	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACTTATTAATTAAGC	9696	False	NA	NA	False	AATAAA	-21	NA	35090988	35068767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.10	chr2	-	3922	7	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-37	-3	intron_retention	FALSE	canonical	3	890	junction_1	84.5576726264388	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGTTGCATTATTTT	9653	False	NA	NA	False	AATAAA	-23	NA	35091031	35070219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.11	chr2	-	4916	2	FSM	ENSMUSG00000026878.18	ENSMUST00000142015.2	639	2	-1297	-2980	-1297	-5	multi-exon	FALSE	canonical	3	890	junction_1	0	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACATAGTTGCATTATT	NA	False	NA	NA	False	AATAAA	-21	NA	35075457	35070221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35073436_35073755
ES.18917.12	chr2	-	2923	7	NNC	ENSMUSG00000026878.18	novel	4346	6	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.811646085639	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACATAGTTGCATTATT	9696	False	NA	NA	False	AATAAA	-21	NA	35090988	35070221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072478_35073751_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.13	chr2	-	2535	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-41	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.099712653849	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAACATAGTTGCATT	9649	False	NA	NA	False	AATAAA	-18	NA	35091035	35070224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35071899_35072339_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.15	chr2	-	3009	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.286046352201	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAACATAGTTGCATT	9701	False	NA	NA	False	AATAAA	-18	NA	35090983	35070224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089936_35090022_35090771
ES.18917.16	chr2	-	3055	8	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-41	-8	combination_of_known_junctions	FALSE	canonical	1	18	junction_7	357.467852129562	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAACATAGTTGCATT	9649	False	NA	NA	False	AATAAA	-18	NA	35091035	35070224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090692
ES.18917.17	chr2	-	2241	2	NNC	ENSMUSG00000026878.18	novel	925	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGAACATAGTTGCAT	9696	False	NA	NA	False	AATAAA	-17	NA	35090988	35070225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072365_35090886
ES.18917.19	chr2	-	5305	6	NIC	ENSMUSG00000026878.18	novel	925	7	NA	NA	0	-11	intron_retention	FALSE	canonical	3	890	junction_1	84.1555702256244	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTGAACATAGTTGC	9696	False	NA	NA	False	AATAAA	-15	NA	35090988	35070227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35073436_35073755_35073844_35076685_35076753_35079911_35081578_35082632_35082692_35090771
ES.18917.2	chr2	-	3245	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	97	-261	-41	261	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATTGTCATAGTGCAGC	9649	False	NA	NA	False	AATAAA	-20	NA	35091035	35069955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.20	chr2	-	2970	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	441.32596725663	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTGAACATAGTTGC	9696	False	NA	NA	False	AATAAA	-15	NA	35090988	35070227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076222_35076267_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.21	chr2	-	2979	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	450.926667402805	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTGAACATAGTTGC	9695	False	NA	NA	False	AATAAA	-15	NA	35090989	35070227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35072528_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.22	chr2	-	2915	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	364.270251772679	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTGAACATAGTTGC	9679	False	NA	NA	False	AATAAA	-15	NA	35091005	35070227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079939_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.23	chr2	-	3819	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-53	-12	intron_retention	FALSE	canonical	3	58	junction_7	344.015305781945	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAATTGAACATAGTTG	9637	False	NA	NA	False	AATAAA	-14	NA	35091047	35070228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089936
ES.18917.25	chr2	-	3071	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	372.591202367464	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATTAAATTGAACATAGT	9696	False	NA	NA	False	AATAAA	-12	NA	35090988	35070230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072608_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.26	chr2	-	2752	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	-60	389	-60	-389	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTTTCTTGTGGATT	9492	False	NA	-6	True	AATAAA	-30	NA	35091192	35070605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.27	chr2	-	2707	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-3	-393	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.49093849812	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTCGGTTTTCTTGTG	9722	False	NA	-10	True	AATAAA	-26	NA	35090962	35070609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832_35090022_35090771
ES.18917.29	chr2	-	2524	7	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	1	-397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	402.811646085639	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGATTCGGTTTTCT	9697	False	NA	-14	True	AATAAA	-22	NA	35090987	35070613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072476_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.3	chr2	-	3025	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	56	0	56	0	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9608	False	NA	NA	False	AATAAA	-26	NA	35091076	35070216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.30	chr2	-	2672	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-41	-397	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.286046352201	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGATTCGGTTTTCT	9649	False	NA	-14	True	AATAAA	-22	NA	35091035	35070613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089936_35090022_35090771
ES.18917.31	chr2	-	2624	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.118440077666	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATAGGATTCGGTTTT	9696	False	NA	-16	True	AATAAA	-20	NA	35090988	35070615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832_35089919_35090771
ES.18917.32	chr2	-	2590	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-1	-400	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	450.926667402805	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAATAGGATTCGGTTT	9695	False	NA	-17	True	AATAAA	-19	NA	35090989	35070616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35072528_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.33	chr2	-	1711	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	84	1286	-54	638	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGACCATGTTACTC	9636	False	NA	9	True	TATAAA	-24	NA	35091048	35071502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.34	chr2	-	1787	8	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-27	620	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	365.068235165059	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTACAGTGTGACCTA	9663	False	NA	-9	True	AATAAA	-34	NA	35091021	35071520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.35	chr2	-	1716	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	612	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.286046352201	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAGTTTGTACAGT	9690	False	NA	-17	True	AATAAA	-26	NA	35090994	35071528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089936_35090022_35090771
ES.18917.36	chr2	-	2570	7	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	612	intron_retention	FALSE	canonical	3	890	junction_1	84.5576726264388	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAGTTTGTACAGT	9696	False	NA	-17	True	AATAAA	-26	NA	35090988	35071528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.37	chr2	-	1724	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-41	612	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	450.926667402805	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCAGTTTGTACAGT	9649	False	NA	-17	True	AATAAA	-26	NA	35091035	35071528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35072528_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.38	chr2	-	1023	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	97	1961	-41	-3	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	9649	False	NA	NA	False	NA	NA	NA	35091035	35072177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.39	chr2	-	1184	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	470.63992340217	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAGAAAAAAGA	9677	False	NA	NA	False	NA	NA	NA	35091007	35072181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076681_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832_35090022_35090771
ES.18917.4	chr2	-	3932	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-50	0	intron_retention	FALSE	canonical	3	57	junction_7	344.351090414112	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9640	False	NA	NA	False	AATAAA	-26	NA	35091044	35070216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832
ES.18917.40	chr2	-	2487	1	FSM	ENSMUSG00000026878.18	ENSMUST00000201694.2	3717	1	1230	0	-232	0	mono-exon	FALSE	NA	NA	NA	NA	NA	777	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35080204	35077717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35077700_35080200
ES.18917.5	chr2	-	3146	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.49093849812	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9676	False	NA	NA	False	AATAAA	-26	NA	35091008	35070216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832_35090022_35090771
ES.18917.6	chr2	-	2974	8	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	363.534912564201	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTTGCATTATTTTTG	9674	False	NA	NA	False	AATAAA	-25	NA	35091010	35070217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082708_35090771
ES.18917.7	chr2	-	3407	6	NNC	ENSMUSG00000026878.18	novel	925	7	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_5	406.923776646192	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTTGCATTATTTTT	9863	False	NA	NA	False	AATAAA	-24	NA	35090821	35070218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080007_35089936
ES.18917.8	chr2	-	3093	8	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	-31	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	365.068235165059	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTTGCATTATTTTT	9659	False	NA	NA	False	AATAAA	-24	NA	35091025	35070218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ES.18917.9	chr2	-	3026	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	442.955415363668	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGTTGCATTATTTT	9696	False	NA	NA	False	AATAAA	-23	NA	35090988	35070219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35085663_35085756_35090771
ES.18918.1	chr2	+	2568	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	41	-2	12	0	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCCAGGTGTCTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	35146432	35197904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ES.18918.2	chr2	+	2618	18	NIC	ENSMUSG00000026879.15	novel	2607	18	NA	NA	10343	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.4288659822025	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTGTCTCACTGCTT	5203	False	NA	NA	False	AATAAA	-21	NA	35156803	35197908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35156916_35172662_35172734_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ES.18918.3	chr2	+	2544	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10412	-3	10343	1	3prime_fragment	FALSE	canonical	3	17	junction_1	5.90517516674992	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGGTGTCTCACTG	5203	False	NA	NA	False	AATAAA	-18	NA	35156803	35197905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ES.18919.1	chr2	-	2842	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-55	0	-55	0	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGAGTCTTGTTTCT	NA	False	NA	0	True	AATAAA	-20	NA	35227043	35203997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
ES.18919.4	chr2	-	1982	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	-31	836	-31	519	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACTGAAGTACCTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	35227019	35204833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
ES.1892.1	chr1	-	187	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAGTTCCGTTCATAT	-3	True	NA	NA	False	NA	NA	NA	171136072	171135885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171135900_171136100
ES.18920.1	chr2	+	838	1	FSM	ENSMUSG00000075391.7	ENSMUST00000120770.2	555	1	-50	-233	-50	233	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACAAAGTTGTGTGACT	5838	False	NA	NA	False	NA	NA	NA	35230370	35231208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35230400_35231200
ES.18921.1	chr2	+	181	1	Intergenic	novelGene_15695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	35316124	35316305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35316100_35316300
ES.18922.1	chr2	+	5193	1	Intergenic	novelGene_15696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCCAGGAAGTCCCTGA	2611	False	NA	NA	False	NA	NA	NA	35344173	35349366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35344200_35349400
ES.18923.1	chr2	-	3492	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113001.9	3340	8	-148	-4	52	0	multi-exon	FALSE	canonical	3	6	junction_3	33.733045628092	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTGGTATGGATTA	NA	False	NA	1	True	AATAAA	-17	NA	35351409	35290190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.10	chr2	-	3486	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	122	-2	-61	-2	multi-exon	FALSE	canonical	3	26	junction_8	26.0836994117016	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351339	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.11	chr2	-	3223	6	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	38.822673787363	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35351298	35290193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35351206
ES.18923.12	chr2	-	3773	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	430	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352813	35290193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.13	chr2	-	3743	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	394	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.4846117415616	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35352849	35290193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.14	chr2	-	3419	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	33.8797392949515	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	1170	False	NA	-2	True	AATAAA	-14	NA	35335840	35290193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.15	chr2	-	3743	8	NNC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	-1360	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	31.4798283323899	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGTCTGGTATGGA	NA	False	NA	-2	True	AATAAA	-14	NA	35354603	35290193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35354176
ES.18923.16	chr2	-	3110	5	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	786	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.4567670482949	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352457	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.17	chr2	-	3409	9	NNC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	852	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	33.4888040992807	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352391	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206_35351266_35352356
ES.18923.18	chr2	-	3764	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	408	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	34.0293990543471	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35352835	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.19	chr2	-	3429	7	NNC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-1136	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.3684621647635	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35354379	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35313243_35313425_35322525_35322645_35354176
ES.18923.2	chr2	-	3215	6	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	835	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	38.810307909111	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTCTGGTATGGATT	NA	False	NA	0	True	AATAAA	-16	NA	35352408	35290191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35313243_35313425_35322525_35322645_35352356
ES.18923.20	chr2	-	3196	7	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	76	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	31.6197020156034	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	1241	False	NA	-3	True	AATAAA	-13	NA	35335769	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35322525_35322645_35335707
ES.18923.21	chr2	-	3508	8	NNC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	-1156	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	36.7956297316263	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35354399	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35354176
ES.18923.23	chr2	-	3442	10	NNC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.4661182164729	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	1273	False	NA	-3	True	AATAAA	-13	NA	35335737	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313241_35313425_35322525_35322645_35334728_35334788_35335707
ES.18923.24	chr2	-	3470	7	NNC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	-1154	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	36.2234577158074	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35354397	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35354176
ES.18923.25	chr2	-	3341	7	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.0646049233246	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35351298	35290194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.26	chr2	-	3314	7	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-66	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	33.3287496848525	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTCTGGTCTGGTATG	NA	False	NA	-4	True	AATAAA	-12	NA	35351344	35290195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.28	chr2	-	3286	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	35.1303129631503	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	False	NA	-5	True	AATAAA	-11	NA	35351268	35290196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35313243_35313425_35322525_35322645_35351206
ES.18923.29	chr2	-	4105	2	ISM	ENSMUSG00000035778.18	ENSMUST00000044255.13	1221	7	13835	-1863	13835	-63	3prime_fragment	FALSE	canonical	3	72	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTAGACATTCTTCA	3765	False	NA	-66	True	ATTAAA	-3	NA	35299504	35290257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35292815_35297956
ES.18923.3	chr2	-	3458	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	34	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	26.2678510731274	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTCTGGTATGGATT	1199	False	NA	0	True	AATAAA	-16	NA	35335811	35290191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.31	chr2	-	3160	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	-4	-95	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.5877788620934	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGAGTAAGCTTAGGA	NA	False	NA	-98	True	AATAAA	-20	NA	35351265	35290289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35351206
ES.18923.32	chr2	-	3702	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	436	-100	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTAATGAGTAAGCT	NA	False	NA	-103	True	AATAAA	-15	NA	35352807	35290294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.33	chr2	-	3322	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	31	-100	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTAATGAGTAAGCT	1196	False	NA	-103	True	AATAAA	-15	NA	35335814	35290294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.34	chr2	-	3660	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	441	-101	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	27.6708053621096	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTCTAATGAGTAAGC	NA	False	NA	-104	True	AATAAA	-14	NA	35352802	35290295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18923.35	chr2	-	3031	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	692	-360	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.5877788620934	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCCACAGGGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	35352551	35290554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35352356
ES.18923.36	chr2	-	2594	5	ISM	ENSMUSG00000035778.18	ENSMUST00000044255.13	1221	7	6828	-1566	6828	-360	3prime_fragment	FALSE	canonical	3	37	junction_4	21.6390850083824	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCCACAGGGCTCT	9131	False	NA	NA	False	AATAAA	-13	NA	35306511	35290554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483
ES.18923.37	chr2	-	2990	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	37	-360	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	32.273139846559	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCCACAGGGCTCT	1202	False	NA	NA	False	AATAAA	-13	NA	35335808	35290554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.38	chr2	-	2986	8	NIC	ENSMUSG00000035778.18	novel	3340	8	NA	NA	77	-360	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	33.8797392949515	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCCACAGGGCTCT	1242	False	NA	NA	False	AATAAA	-13	NA	35335768	35290554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.39	chr2	-	3015	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	12	364	-5	-360	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCCACAGGGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	35351266	35290554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.4	chr2	-	3993	7	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	-603	-1	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	32.273139846559	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTCTGGTATGGATT	562	False	NA	0	True	AATAAA	-16	NA	35336448	35290191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.40	chr2	-	1470	7	ISM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	9	7054	-8	712	5prime_fragment	FALSE	canonical	3	26	junction_6	29.3281245375303	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGCCATGTGGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	35351269	35297244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ES.18923.5	chr2	-	3269	9	NNC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.4163650693116	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	1229	False	NA	-1	True	AATAAA	-15	NA	35335781	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_35290400_35290491_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.6	chr2	-	5077	4	ISM	ENSMUSG00000035778.18	ENSMUST00000044255.13	1221	7	6894	-1928	6894	-2	3prime_fragment	FALSE	canonical	3	60	junction_3	15.4128373622625	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	9197	False	NA	-1	True	AATAAA	-15	NA	35306445	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230
ES.18923.7	chr2	-	3455	8	NIC	ENSMUSG00000035778.18	novel	3391	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	27.4531140198659	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	1165	False	NA	-1	True	AATAAA	-15	NA	35335845	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35335707
ES.18923.8	chr2	-	3323	8	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	33.1219145655833	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35351265	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35313243_35313425_35322525_35322645_35351206
ES.18923.9	chr2	-	3832	9	NIC	ENSMUSG00000035778.18	novel	3606	9	NA	NA	408	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_8	26.4548554144603	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGGTCTGGTATGGAT	NA	False	NA	-1	True	AATAAA	-15	NA	35352835	35290192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35352356
ES.18924.1	chr2	+	1345	1	Antisense	novelGene_ENSMUSG00000081841.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCCATGTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	35373098	35374443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_35373100_35374400
ES.18925.1	chr2	-	259	1	Intergenic	novelGene_15697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCAGATATTGGACGT	NA	False	NA	NA	False	NA	NA	NA	35377803	35377544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_35377500_35377800
ES.18925.2	chr2	-	169	1	Intergenic	novelGene_15698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	35377815	35377646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_35377600_35377800
ES.18926.1	chr2	+	206	1	Intergenic	novelGene_15699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTTAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35381923	35382129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35381900_35382100
ES.18927.1	chr2	+	4101	17	NNC	ENSMUSG00000026883.18	novel	5580	17	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	85.9817386134986	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	3563	False	NA	4	True	ATTAAA	-14	NA	35448273	35620999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35448625_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35620598
ES.18927.10	chr2	+	6578	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	746	0	intron_retention	FALSE	canonical	0	0	junction_1	81.2205775787283	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35471817	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35533901_35534137_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.11	chr2	+	6541	15	NIC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	-316	0	intron_retention	FALSE	canonical	1	7	junction_2	86.3561975607012	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35472535	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35473062_35533899_35534004_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.12	chr2	+	6482	15	NIC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	-60	0	intron_retention	FALSE	canonical	0	0	junction_2	78.0296908430453	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35472791	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35473062_35533899_35534137_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.13	chr2	+	6415	16	NIC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	-58	0	intron_retention	FALSE	canonical	3	33	junction_1	78.1259382165886	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35472793	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35473062_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.14	chr2	+	6481	16	ISM	ENSMUSG00000026883.18	ENSMUST00000135741.8	4128	17	-51	-7	-51	5	intron_retention	FALSE	canonical	3	33	junction_1	66.8343225196954	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTTCTTCATCTGT	NA	False	NA	16	True	ATTAAA	-26	NA	35472800	35621011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35473062_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.15	chr2	+	5308	16	NIC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	82.9967603116063	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35472852	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35473062_35533899_35534004_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.16	chr2	+	6457	16	NNC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_3	81.4558094238151	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35472862	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35473062_35533899_35534004_35551503_35551638_35597614_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.17	chr2	+	6260	15	NIC	ENSMUSG00000026883.18	novel	4128	17	NA	NA	29	0	intron_retention	FALSE	canonical	1	7	junction_2	76.7865116237672	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35472880	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35473062_35533899_35534004_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.18	chr2	+	5486	17	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11606	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	86.1606194485044	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	4180	False	NA	11	True	ATTAAA	-21	NA	35500386	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.19	chr2	+	6537	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11606	3	intron_retention	FALSE	canonical	3	14	junction_1	70.1929404490857	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGCCTTTCTTCATCT	4180	False	NA	14	True	ATTAAA	-24	NA	35500386	35621009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.2	chr2	+	6269	16	ISM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	298	-5	298	5	intron_retention	FALSE	canonical	0	0	junction_1	72.7661093275343	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTTCTTCATCTGT	3865	False	NA	16	True	ATTAAA	-26	NA	35448575	35621011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35448625_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.20	chr2	+	5325	17	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11381	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	77.9308337165079	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	4405	False	NA	9	True	ATTAAA	-19	NA	35500611	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.22	chr2	+	6228	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11368	0	intron_retention	FALSE	canonical	3	14	junction_1	80.8759269223887	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	4418	False	NA	9	True	ATTAAA	-19	NA	35500624	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.23	chr2	+	6203	17	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11368	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	84.0851502942107	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	4418	False	NA	9	True	ATTAAA	-19	NA	35500624	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35619032_35619122
ES.18927.24	chr2	+	6185	15	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11363	0	intron_retention	FALSE	canonical	0	0	junction_1	65.9371995592343	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	4423	False	NA	9	True	ATTAAA	-19	NA	35500629	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.25	chr2	+	3816	10	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11358	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	105.420849719377	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	4428	False	NA	8	True	ATTAAA	-18	NA	35500634	35621003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605478_35618791
ES.18927.27	chr2	+	6432	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-5913	0	intron_retention	FALSE	canonical	0	0	junction_1	83.0171602073263	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	2553	False	NA	11	True	ATTAAA	-21	NA	35506079	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35506363_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.28	chr2	+	6537	16	FSM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	-75	-7	-19	0	multi-exon	FALSE	canonical	3	22	junction_1	68.7589670919769	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8447	False	NA	11	True	ATTAAA	-21	NA	35511973	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.29	chr2	+	6465	16	NIC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	-15	0	intron_retention	FALSE	canonical	3	22	junction_1	79.6952528908299	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	8451	False	NA	9	True	ATTAAA	-19	NA	35511977	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.3	chr2	+	6278	16	FSM	ENSMUSG00000026883.18	ENSMUST00000112987.8	6287	16	11	-2	11	0	multi-exon	FALSE	canonical	0	0	junction_1	72.7661093275343	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	9573	False	NA	11	True	ATTAAA	-21	NA	35471082	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35471146_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.30	chr2	+	6377	15	NIC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	5	0	intron_retention	FALSE	canonical	1	7	junction_2	78.4899577614089	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	8471	False	NA	9	True	ATTAAA	-19	NA	35511997	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35512296_35533899_35534004_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.31	chr2	+	6304	17	NNC	ENSMUSG00000026883.18	novel	6455	16	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	83.0440395212083	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTTTAAGCCTGACTT	8472	False	NA	0	True	ATTAAA	-10	NA	35511998	35620995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618936_35619132
ES.18927.32	chr2	+	6645	16	FSM	ENSMUSG00000026883.18	ENSMUST00000145698.8	6649	16	6	-2	6	0	multi-exon	FALSE	canonical	3	11	junction_2	77.7277299295432	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8472	False	NA	11	True	ATTAAA	-21	NA	35511998	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35512296_35533899_35534137_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.33	chr2	+	5304	13	NNC	ENSMUSG00000026883.18	novel	6184	15	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	92.4660598393931	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGCCTGACTTGCC	8473	False	NA	3	True	ATTAAA	-13	NA	35511999	35620998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610618_35618697
ES.18927.34	chr2	+	5513	17	NIC	ENSMUSG00000026883.18	novel	6455	16	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	76.7872212269073	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8489	False	NA	11	True	ATTAAA	-21	NA	35512015	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.35	chr2	+	6710	16	NNC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	24	-1	intron_retention	FALSE	canonical	0	0	junction_13	91.5292303037669	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	8490	False	NA	8	True	ATTAAA	-18	NA	35512016	35621003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35512296_35533899_35534137_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35612954_35613235_35617437_35617526_35618069
ES.18927.36	chr2	+	3947	17	NNC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	90.5831800060033	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	8511	False	NA	9	True	ATTAAA	-19	NA	35512037	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35620598
ES.18927.37	chr2	+	6374	15	NIC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_2	88.8177737774119	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	8536	False	NA	4	True	ATTAAA	-14	NA	35512062	35620999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35512296_35533899_35534137_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.38	chr2	+	155	1	Intergenic	novelGene_15700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	35520783	35520938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35520800_35520900
ES.18927.39	chr2	+	211	1	Intergenic	novelGene_15701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCATTTGAACATGACCA	NA	False	NA	NA	False	AAAAAG	-4	NA	35520940	35521151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35520900_35521200
ES.18927.4	chr2	+	6603	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	524	0	intron_retention	FALSE	canonical	2	14	junction_1	80.8759269223887	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35471595	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.40	chr2	+	5150	15	NIC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	-17382	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	76.0013426304605	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35533979	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35534137_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.41	chr2	+	6442	14	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-255	0	intron_retention	FALSE	canonical	3	43	junction_9	57.3698681813714	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551106	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.42	chr2	+	5490	15	ISM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	102865	0	-219	0	3prime_fragment	FALSE	canonical	3	47	junction_14	55.3541934698165	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551142	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.43	chr2	+	5127	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-194	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.6690272048319	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551167	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551232_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.44	chr2	+	6411	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39155	-7	-158	0	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551203	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.45	chr2	+	5323	15	NIC	ENSMUSG00000026883.18	novel	5580	17	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_9	70.8283711747299	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551243	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.47	chr2	+	7871	13	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-53	0	intron_retention	FALSE	canonical	3	179	junction_8	28.2498770892115	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551308	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.48	chr2	+	6312	14	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-48	-2	intron_retention	FALSE	canonical	1	1	junction_3	67.5648275152077	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGACTTGCCTTTC	NA	False	NA	7	True	ATTAAA	-17	NA	35551313	35621002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599814_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.49	chr2	+	7909	13	NIC	ENSMUSG00000026883.18	novel	6287	16	NA	NA	-43	0	intron_retention	FALSE	canonical	3	179	junction_9	31.4735338551827	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551318	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35613235_35617437_35617526_35618069
ES.18927.5	chr2	+	5669	17	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	549	5	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	77.9308337165079	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTTCTTCATCTGT	NA	False	NA	16	True	ATTAAA	-26	NA	35471620	35621011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.50	chr2	+	3834	15	NNC	ENSMUSG00000026883.18	novel	5580	17	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.9371995592343	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551322	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35620598
ES.18927.51	chr2	+	6190	14	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-38	-2	intron_retention	FALSE	canonical	0	0	junction_2	64.8357049707432	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGACTTGCCTTTC	NA	False	NA	7	True	ATTAAA	-17	NA	35551323	35621002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597760_35598868_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.52	chr2	+	6469	15	NNC	ENSMUSG00000026883.18	novel	6287	16	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	91.8349506629437	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551342	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35565668_35565934_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.53	chr2	+	6120	15	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_10	78.962403867219	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551347	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610031_35610111_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.54	chr2	+	6294	14	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_11	67.9835517872483	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551347	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613013_35613235_35617437_35617526_35618069
ES.18927.55	chr2	+	8755	13	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-9	0	intron_retention	FALSE	canonical	3	179	junction_8	31.4151193252902	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551352	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.57	chr2	+	4336	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39307	1916	-6	124	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGGTGGATAACTGTG	NA	False	NA	NA	False	AAGAAA	-23	NA	35551355	35619083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.58	chr2	+	3664	8	NNC	ENSMUSG00000026883.18	novel	6184	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.4347327863813	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35551357	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605498_35618935
ES.18927.6	chr2	+	6434	15	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	581	-3	intron_retention	FALSE	canonical	0	0	junction_1	78.962403867219	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTTTAAGCCTGACTTG	NA	False	NA	1	True	ATTAAA	-11	NA	35471652	35620996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.62	chr2	+	6521	14	FSM	ENSMUSG00000026883.18	ENSMUST00000065001.12	6392	14	-127	-2	-127	0	multi-exon	FALSE	canonical	3	30	junction_1	58.8774677870724	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	252	False	NA	11	True	ATTAAA	-21	NA	35581878	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.63	chr2	+	6577	14	NNC	ENSMUSG00000026883.18	novel	6392	14	NA	NA	-126	0	intron_retention	FALSE	canonical	3	10	junction_1	63.6432363921064	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	253	False	NA	9	True	ATTAAA	-19	NA	35581879	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35582482_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.64	chr2	+	5501	15	NIC	ENSMUSG00000026883.18	novel	6392	14	NA	NA	-93	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	70.6600080292514	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGACTTGCCTTTC	286	False	NA	7	True	ATTAAA	-17	NA	35581912	35621002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ES.18927.65	chr2	+	6409	14	NIC	ENSMUSG00000026883.18	novel	6392	14	NA	NA	-84	-1	intron_retention	FALSE	canonical	3	30	junction_1	73.7547511256696	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	295	False	NA	8	True	ATTAAA	-18	NA	35581921	35621003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.66	chr2	+	1778	6	ISM	ENSMUSG00000026883.18	ENSMUST00000065001.12	6392	14	-70	17549	-70	3510	5prime_fragment	FALSE	canonical	3	30	junction_1	89.0626745612324	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACCTGTAAGGTGTG	309	False	NA	NA	False	AATATA	-12	NA	35581935	35603455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117
ES.18927.67	chr2	+	5913	13	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-2681	0	intron_retention	FALSE	canonical	3	43	junction_8	57.2860148727418	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35597657	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.69	chr2	+	5551	10	ISM	ENSMUSG00000026883.18	ENSMUST00000112992.9	6184	15	87676	0	-491	0	3prime_fragment	FALSE	canonical	2	8	junction_7	68.3890468452007	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	NA	False	NA	9	True	ATTAAA	-19	NA	35599847	35621004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35613040_35613235_35617437_35617526_35618069
ES.18927.7	chr2	+	6592	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	603	0	intron_retention	FALSE	canonical	2	14	junction_1	70.1929404490857	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35471674	35621006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.70	chr2	+	2933	1	NIC	ENSMUSG00000026883.18	novel	5580	17	NA	NA	17728	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	NA	False	NA	4	True	ATTAAA	-14	NA	35618066	35620999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_35618100_35621000
ES.18927.8	chr2	+	6337	14	NNC	ENSMUSG00000026883.18	novel	4014	11	NA	NA	614	1	intron_retention	FALSE	canonical	0	0	junction_1	66.0584285033436	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGCCTGACTTGCCTT	NA	False	NA	5	True	ATTAAA	-15	NA	35471685	35621000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ES.18927.9	chr2	+	6475	17	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	655	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	84.0851502942107	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGACTTGCCTTTCT	NA	False	NA	8	True	ATTAAA	-18	NA	35471726	35621003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35472052_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35620365_35620426
ES.18928.1	chr2	+	662	4	NNC	ENSMUSG00000086449.2	novel	653	3	NA	NA	-299	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATATCTATTTCTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	35708902	35713392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_35708929_35709204_35709291_35712534_35712694_35713001
ES.18929.1	chr2	+	292	1	Intergenic	novelGene_15702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	AATACA	-29	NA	35821308	35821600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_35821300_35821600
ES.1893.1	chr1	-	219	1	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCTAGCTCCCAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	171138416	171138197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171138200_171138400
ES.18930.1	chr2	-	820	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	39	2	39	-2	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTGTTTTATTATG	NA	False	NA	-3	True	ATTAAA	-13	NA	35939379	35926339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ES.18930.2	chr2	-	883	1	NIC	ENSMUSG00000026895.8	novel	861	4	NA	NA	12195	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTGTGTTTTATTAT	NA	False	NA	-4	True	ATTAAA	-12	NA	35927223	35926340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_35926300_35927200
ES.18930.3	chr2	-	1036	6	Fusion	ENSMUSG00000026895.8_ENSMUSG00000026890.20	novel	861	4	NA	NA	2840	-3	multi-exon	FALSE	canonical	1	1	junction_4	606.206895374838	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTGTGTTTTATTAT	NA	False	NA	-4	True	ATTAAA	-12	NA	35981445	35926340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_35926654_35929723_35929890_35934361_35934526_35977379_35977484_35980973_35981149_35981331
ES.18930.6	chr2	-	212	1	Intergenic	novelGene_15703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTCATCCTACCCTC	NA	False	NA	NA	False	NA	NA	NA	35942571	35942359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_35942400_35942600
ES.18930.7	chr2	-	2405	3	ISM	ENSMUSG00000026890.20	ENSMUST00000136821.9	825	5	2840	-1724	2840	-6	3prime_fragment	FALSE	canonical	3	7	junction_1	4	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAATGCCATGGAA	NA	False	NA	NA	False	AATAAA	-33	NA	35981445	35971971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35974088_35980973_35981149_35981331
ES.18930.9	chr2	-	2507	4	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	12615	21	2828	-20	3prime_fragment	FALSE	canonical	1	1	junction_2	6.37704215656966	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCCGGCACTTAAACCC	NA	False	NA	NA	False	AATAAA	-19	NA	35981457	35971985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
ES.18931.1	chr2	+	1557	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	9	1057	0	-1057	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGATAGAGTGGTTTG	NA	False	NA	20	True	AATAAA	-21	NA	36026409	36079602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ES.18931.2	chr2	+	1397	6	NIC	ENSMUSG00000026887.10	novel	2623	7	NA	NA	0	-1061	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	66.6123111744368	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGAAAGATAGAGTGG	NA	False	NA	16	True	AATAAA	-17	NA	36026409	36079598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_36026712_36031457_36031670_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ES.18931.3	chr2	+	2003	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	248	372	3	-372	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCACAAAGGAGACAGATA	NA	False	NA	NA	False	AATAAA	-23	NA	36026648	36080287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ES.18931.4	chr2	+	1640	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	264	719	19	-719	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTCCTTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	36026664	36079940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ES.18931.5	chr2	+	4358	6	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	271	9794	26	-9794	5prime_fragment	FALSE	canonical	3	141	junction_1	20.0299775336868	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTGCAAATGGCTA	NA	False	NA	NA	False	ATTAAA	-21	NA	36026671	36070865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126
ES.18931.6	chr2	+	1432	8	NNC	ENSMUSG00000026887.10	novel	2623	7	NA	NA	30	-1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.3849735704022	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGATAGAGTGGTTTG	NA	False	NA	20	True	AATAAA	-21	NA	36026675	36079602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_36026712_36031457_36031670_36037106_36037248_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ES.18932.1	chr2	-	2298	5	FSM	ENSMUSG00000026889.13	ENSMUST00000122456.8	781	5	30	-1547	-5	0	multi-exon	FALSE	canonical	0	0	junction_3	119.472538685675	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026593	36006090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36024146_36024276_36026493
ES.18932.10	chr2	-	1026	7	NNC	ENSMUSG00000026889.13	novel	1000	7	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.798995822868	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGATGTGAACACTGAG	NA	False	NA	-18	True	AATAAA	-16	NA	36026622	36007615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36025082_36025180_36026493
ES.18932.11	chr2	-	1293	3	ISM	ENSMUSG00000026889.13	ENSMUST00000134668.2	714	6	26	8428	-13	24	5prime_fragment	FALSE	canonical	3	277	junction_2	5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAGAAGAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	36026601	36016207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_36017264_36024146_36024276_36026493
ES.18932.12	chr2	-	3546	2	FSM	ENSMUSG00000026889.13	ENSMUST00000142809.2	3509	2	-13	-24	-9	24	multi-exon	FALSE	canonical	3	287	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAGAAGAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	36026636	36016207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_36017264_36024146
ES.18932.2	chr2	-	6866	5	NIC	ENSMUSG00000026889.13	novel	2617	6	NA	NA	-63	0	intron_retention	FALSE	canonical	3	268	junction_1	7.0178344238091	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026848	36006090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_36007987_36010824_36010911_36012863_36017264_36024146_36024276_36026493
ES.18932.3	chr2	-	4001	2	ISM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	13855	1	13658	-1	intron_retention	FALSE	canonical	3	268	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTGGTCTTATTGTC	NA	False	NA	-24	True	AATAAA	-15	NA	36012930	36006091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_36007987_36010824
ES.18932.4	chr2	-	2466	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	150	1	-8	-1	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTGGTCTTATTGTC	NA	False	NA	-24	True	AATAAA	-15	NA	36026635	36006091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ES.18932.5	chr2	-	2532	7	NNC	ENSMUSG00000026889.13	novel	1000	7	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.798995822868	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTGGTCTTATTGTC	NA	False	NA	-24	True	AATAAA	-15	NA	36026604	36006091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36025082_36025180_36026493
ES.18932.6	chr2	-	2451	6	NNC	ENSMUSG00000026889.13	novel	2617	6	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	108.141388931343	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTGGTCTTATTGTC	NA	False	NA	-24	True	AATAAA	-15	NA	36026630	36006091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024266_36026493
ES.18932.7	chr2	-	2532	7	NNC	ENSMUSG00000026889.13	novel	1000	7	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	125.719263970695	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATGTGGTCTTATTGT	NA	False	NA	-25	True	AATAAA	-14	NA	36026601	36006092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36025641_36025743_36026493
ES.18932.8	chr2	-	3653	6	NNC	ENSMUSG00000026889.13	novel	1000	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.856997956434	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATGTGGTCTTATTGT	NA	False	NA	-25	True	AATAAA	-14	NA	36026588	36006092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_36009222_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ES.18932.9	chr2	-	979	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	124	1514	-34	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGAGATGCGCTAGTT	NA	False	NA	-7	True	AATAAA	-27	NA	36026661	36007604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ES.18933.1	chr2	+	3516	14	Fusion	ENSMUSG00000087187.2_ENSMUSG00000047250.14	novel	2867	11	NA	NA	2001	1	multi-exon	TRUE	canonical	0	0	junction_2	1.39313617509806	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGCTATGTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	36112502	36142282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_36112587_36112753_36113103_36117523_36117577_36120132_36120442_36120679_36120776_36127218_36127336_36127662_36127804_36127968_36128113_36130607_36130790_36130882_36130967_36132774_36133022_36135055_36135343_36139107_36139256_36141007
ES.18934.1	chr2	-	3158	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	92	-392	13	392	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTTGTTCCTGTAATC	NA	False	NA	NA	False	NA	NA	NA	37249252	37239693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ES.18934.10	chr2	-	2584	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	472	0	408	0	multi-exon	FALSE	canonical	2	7	junction_3	79.6366749682582	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATATTTAAAAGCCA	NA	False	NA	-19	True	AATAAA	-10	NA	37248793	37240599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
ES.18934.12	chr2	-	1966	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	50	842	-29	-328	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGCCACCTAAATACT	NA	False	NA	NA	False	AATAAA	-25	NA	37249294	37240927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ES.18934.2	chr2	-	2841	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	18	-1	18	1	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTATATTAGATATTTG	NA	False	NA	-6	True	AATAAA	-21	NA	37249326	37240084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ES.18934.3	chr2	-	2851	5	NNC	ENSMUSG00000009030.15	novel	685	5	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.832686081702	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTATATTAGATATTTG	NA	False	NA	-6	True	AATAAA	-21	NA	37249263	37240084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363_37248437_37249154
ES.18934.5	chr2	-	4152	3	NIC	ENSMUSG00000009030.15	novel	2858	4	NA	NA	12	-1	intron_retention	FALSE	canonical	3	157	junction_1	3	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTGTATATTAGATATT	NA	False	NA	-8	True	AATAAA	-19	NA	37249253	37240086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37242395_37245647_37247393_37249154
ES.18934.6	chr2	-	2822	5	FSM	ENSMUSG00000009030.15	ENSMUST00000147703.3	685	5	-55	-2082	2	-2	multi-exon	FALSE	canonical	2	4	junction_4	84.8130296593631	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTGTATATTAGATAT	NA	False	NA	-9	True	AATAAA	-18	NA	37249263	37240087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363_37248411_37249154
ES.18934.7	chr2	-	4527	3	ISM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	91	2	12	-2	intron_retention	FALSE	canonical	3	157	junction_1	16.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTGTATATTAGATAT	NA	False	NA	-9	True	AATAAA	-18	NA	37249253	37240087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37242395_37245647_37245830_37247215
ES.18934.8	chr2	-	3026	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	141	-111	77	111	multi-exon	FALSE	canonical	2	7	junction_3	79.6366749682582	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTTTCCTTTTAG	NA	False	NA	92	True	NA	NA	NA	37249124	37240488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
ES.18934.9	chr2	-	2289	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	74	495	-5	19	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTTACTACTGATA	NA	False	NA	0	True	AATAAA	-29	NA	37249270	37240580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ES.18935.1	chr2	+	6847	1	Antisense	novelGene_ENSMUSG00000075376.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	37257863	37264710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_37257900_37264700
ES.18936.1	chr2	-	3381	1	Genic_Genomic	ENSMUSG00000075376.11	novel	NA	NA	NA	NA	5327	1205	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGATTAGACATCTATAC	NA	False	NA	NA	False	NA	NA	NA	37262256	37258875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_37258900_37262300
ES.18936.14	chr2	-	8802	23	NNC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-81	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.4446492379285	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTGTTTTCTTAGT	NA	False	NA	-6	True	AATAAA	-15	NA	37312996	37260086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273041_37273164_37273229_37275257_37275473_37279596_37279787_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.16	chr2	-	8929	21	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-115	-2	intron_retention	FALSE	canonical	0	0	junction_19	14.3017481448947	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTGTTTTCTTAGT	NA	False	NA	-6	True	AATAAA	-15	NA	37313030	37260086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.17	chr2	-	8768	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-109	-304	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAATTGTAATGTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	37313024	37260388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.18	chr2	-	8662	21	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-85	-304	intron_retention	FALSE	canonical	0	0	junction_4	14.0266710234467	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAATTGTAATGTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	37313000	37260388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.19	chr2	-	7759	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-98	-1302	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGTGTCTTAGAACT	NA	False	NA	NA	False	ATTAAA	-23	NA	37313013	37261386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.2	chr2	-	9018	22	FSM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-70	0	-70	0	multi-exon	FALSE	canonical	0	0	junction_20	12.7563953992798	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37312985	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.20	chr2	-	7722	22	NNC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-69	-1304	intron_retention	FALSE	canonical	0	0	junction_5	14.0784971368628	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTAGTGTCTTAGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	37312984	37261388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267443_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.21	chr2	-	6508	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-92	518	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTACACCTGCCAACC	NA	False	NA	NA	False	AGTAAA	-17	NA	37313007	37262631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.23	chr2	-	5967	22	FSM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-91	3072	-91	-3	multi-exon	FALSE	canonical	0	0	junction_20	12.7563953992798	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTCCAATGTATTTT	NA	False	NA	NA	False	TATAAA	-20	NA	37313006	37263152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.24	chr2	-	4957	19	ISM	ENSMUSG00000075376.11	ENSMUST00000100143.10	8799	20	3642	3458	3556	-393	3prime_fragment	FALSE	canonical	3	21	junction_4	8.55699843532896	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTCATAAGGTGACTGA	NA	False	NA	NA	False	AGTAAA	-30	NA	37301191	37263542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151
ES.18936.25	chr2	-	4277	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-90	-1711	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAAGTAGAGTTAATTAA	NA	False	NA	NA	False	ATTAAA	-29	NA	37313005	37264860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.26	chr2	-	4018	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-99	1743	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCCATTTCCTGTGG	NA	False	NA	NA	False	AAAAAG	-10	NA	37313014	37265128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.27	chr2	-	7516	16	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-6	234	intron_retention	FALSE	canonical	0	0	junction_14	12.3017613914973	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGGAACAAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	37312895	37267583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.28	chr2	-	3494	17	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-82	7503	-82	234	5prime_fragment	FALSE	canonical	0	0	junction_15	12.383835229847	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGGAACAAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	37312997	37267583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.29	chr2	-	2882	15	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-84	8825	-84	-1088	5prime_fragment	FALSE	canonical	0	0	junction_13	13.1918728846241	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACGTAATTGCTAATTC	NA	False	NA	NA	False	TATAAA	-20	NA	37312999	37268905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.3	chr2	-	8874	22	NNC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.3956191261755	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37312984	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267254_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279787_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.30	chr2	-	3627	14	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-79	10940	-79	-3203	5prime_fragment	FALSE	canonical	0	0	junction_12	13.6203815254716	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCTTTATT	NA	False	NA	NA	False	AATATA	-8	NA	37312994	37271020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.31	chr2	-	3329	14	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-81	11240	-81	-3503	5prime_fragment	FALSE	canonical	0	0	junction_12	13.6203815254716	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGAGGTTGAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	37312996	37271320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.32	chr2	-	7334	12	NNC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-76	-3503	intron_retention	FALSE	non_canonical	0	0	junction_2	21.1976140868544	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGAGGTTGAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	37312991	37271320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37272050_37272794_37273229_37275258_37279903_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.33	chr2	-	4007	9	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-82	-222	intron_retention	FALSE	canonical	0	0	junction_7	16.2538456987877	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGTAAATATCTGTATT	NA	False	NA	NA	False	NA	NA	NA	37312997	37287124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.34	chr2	-	2778	10	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-83	27044	-83	-222	5prime_fragment	FALSE	canonical	0	0	junction_8	15.3260852434302	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGTAAATATCTGTATT	NA	False	NA	NA	False	NA	NA	NA	37312998	37287124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.35	chr2	-	1585	7	ISM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	-109	30183	-109	-3361	5prime_fragment	FALSE	canonical	0	0	junction_5	18.6525244046662	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTCTCTACTGAATAT	NA	False	NA	NA	False	NA	NA	NA	37313024	37290263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.36	chr2	-	174	1	Intergenic	novelGene_15704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	37296470	37296296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37296300_37296500
ES.18936.4	chr2	-	9057	22	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-90	0	intron_retention	FALSE	canonical	0	0	junction_20	11.6766720944717	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37313005	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.5	chr2	-	9081	22	NNC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-120	0	intron_retention	FALSE	canonical	0	0	junction_15	14.1103522569894	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37313035	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289960_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ES.18936.6	chr2	-	8976	21	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	-64	0	intron_retention	TRUE	canonical	3	8	junction_20	11.8839177041917	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37312979	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37312778
ES.18936.8	chr2	-	7079	11	NIC	ENSMUSG00000075376.11	novel	8948	22	NA	NA	465	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	13.9215660038661	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37279744	37260080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37271881_37272050_37272794_37273229_37275257_37275473_37279596
ES.18937.1	chr2	-	171	1	Intergenic	novelGene_15705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTAC	NA	False	NA	NA	False	NA	NA	NA	37315154	37314983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37315000_37315200
ES.18938.1	chr2	-	4896	2	NNC	ENSMUSG00000066798.4	novel	4535	2	NA	NA	84	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGTATTTCTATGA	NA	False	NA	6	True	AATAAA	-25	NA	37320847	37315507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37319936_37320379
ES.18938.10	chr2	-	5336	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	-67	-2	-53	2	multi-exon	FALSE	canonical	3	22	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCATTGACTTCTT	NA	False	NA	4	True	AATAAA	-16	NA	37333200	37322177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37327012_37332698
ES.18938.11	chr2	-	6428	1	FSM	ENSMUSG00000050714.10	ENSMUST00000203522.2	4657	1	4538	-6309	4523	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGGTGTCATTGACT	NA	False	NA	0	True	AATAAA	-12	NA	37328609	37322181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37322200_37328600
ES.18938.12	chr2	-	4924	2	FSM	ENSMUSG00000050714.10	ENSMUST00000102789.3	2047	2	-29	-2848	-14	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGGTGTCATTGACT	NA	False	NA	0	True	AATAAA	-12	NA	37333161	37322181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37327012_37333067
ES.18938.13	chr2	-	5095	3	NNC	ENSMUSG00000050714.10	novel	5267	2	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGGTGTCATTGAC	NA	False	NA	-1	True	AATAAA	-11	NA	37333155	37322182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37327012_37332698_37332877_37333067
ES.18938.14	chr2	-	4758	3	NNC	ENSMUSG00000050714.10	novel	5267	2	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGGTGTCATTGAC	NA	False	NA	-1	True	AATAAA	-11	NA	37333155	37322182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37325207_37325734_37327012_37332698
ES.18938.15	chr2	-	2489	2	FSM	ENSMUSG00000050714.10	ENSMUST00000102789.3	2047	2	13	-455	13	455	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGCCTGCTTCTTACC	NA	False	NA	NA	False	AGTAAA	-13	NA	37333119	37324574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37327012_37333067
ES.18938.16	chr2	-	1556	1	ISM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	6582	2816	6581	34	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGAAGTTTTCCTAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	37326551	37324995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37325000_37326600
ES.18938.17	chr2	-	4645	1	FSM	ENSMUSG00000050714.10	ENSMUST00000203522.2	4657	1	12	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37333135	37328490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37328500_37333100
ES.18938.2	chr2	-	4619	3	NNC	ENSMUSG00000066798.4	novel	5077	3	NA	NA	-468	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGGCTTGTGTATTT	NA	False	NA	0	True	AATAAA	-19	NA	37321399	37315513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37319936_37320820_37320992_37321373
ES.18938.3	chr2	-	6353	4	NNC	ENSMUSG00000066798.4	novel	5077	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	8.80656320908194	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	-1	True	AATAAA	-18	NA	37333182	37315514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37319936_37320820_37320992_37325734_37327012_37332698
ES.18938.4	chr2	-	3748	3	NNC	ENSMUSG00000066798.4	novel	5077	3	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGGGCTTGTGTATT	NA	False	NA	-1	True	AATAAA	-18	NA	37320869	37315514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37315904_37316625_37319936_37320820
ES.18938.5	chr2	-	5669	3	NNC	ENSMUSG00000066798.4	novel	5077	3	NA	NA	-3430	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGGGCTTGTGTAT	NA	False	NA	-2	True	AATAAA	-17	NA	37324361	37315515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37319936_37320820_37320992_37323283
ES.18938.6	chr2	-	5017	3	FSM	ENSMUSG00000066798.4	ENSMUST00000112932.2	5077	3	56	4	56	-4	multi-exon	FALSE	canonical	0	0	junction_2	9.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAACTTTGGGCTTGTG	NA	False	NA	-5	True	AATAAA	-14	NA	37333127	37315518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37319936_37320820_37320992_37332698
ES.18938.7	chr2	-	2596	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	56	1883	56	-1880	multi-exon	FALSE	canonical	3	19	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCCCTTTTGATATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	37320875	37317394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37319936_37320820
ES.18938.8	chr2	-	2352	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	-173	2356	-173	-2353	multi-exon	FALSE	canonical	3	19	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTGTCTTGGCCTAGT	NA	False	NA	NA	False	NA	NA	NA	37321104	37317867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37319936_37320820
ES.18938.9	chr2	-	1472	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	45	3018	45	-3015	multi-exon	FALSE	canonical	3	19	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTGGTGTGATTAA	NA	False	NA	NA	False	NA	NA	NA	37320886	37318529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37319936_37320820
ES.18939.1	chr2	+	5096	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	-24	-105	-18	88	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCCTGCCCATGGCCC	1521	False	NA	112	True	AGTAAA	-16	NA	37333272	37456554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.10	chr2	+	4977	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	59.2856947332154	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	1546	False	NA	6	True	ATTAAA	-17	NA	37333297	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427401_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.11	chr2	+	4798	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.1916918928808	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGCTTCATACAAAAG	1547	False	NA	5	True	ATTAAA	-16	NA	37333298	37456447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333466_37359527_37359608_37362339_37362527_37363599_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.12	chr2	+	4811	25	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	60.5983475205572	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTTCATACAAAAGTAG	1551	False	NA	8	True	ATTAAA	-19	NA	37333302	37456450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.13	chr2	+	2389	7	ISM	ENSMUSG00000035437.16	ENSMUST00000133434.8	1594	11	12	7259	-5	164	intron_retention	FALSE	canonical	3	116	junction_1	59.8815961340006	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	1551	False	NA	NA	False	NA	NA	NA	37333302	37378342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077
ES.18939.14	chr2	+	3412	20	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	2	3375	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_19	62.7881722192733	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGGCCTTGGCTACTA	1558	False	NA	NA	False	AATAAA	-20	NA	37333309	37438349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37437555
ES.18939.15	chr2	+	5029	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	59.3545280496779	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATTGCTTCATACAAA	1559	False	NA	3	True	ATTAAA	-14	NA	37333310	37456445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432771_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.16	chr2	+	2365	13	ISM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	20	56975	9	324	5prime_fragment	FALSE	canonical	3	116	junction_1	44.2175021908746	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTGGCTTTTTGGTTT	1565	False	NA	NA	False	NA	NA	NA	37333316	37399474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939
ES.18939.17	chr2	+	4284	19	ISM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	20	21533	9	-58	5prime_fragment	FALSE	canonical	3	116	junction_1	36.5419174154157	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGCTTATCTCTGT	1565	False	NA	NA	False	ATTAAA	-25	NA	37333316	37434916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114
ES.18939.2	chr2	+	2837	14	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	-18	2691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.6107505549431	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATGTTTCCAAGGCT	1521	False	NA	NA	False	AATAAA	-33	NA	37333272	37401841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37401029
ES.18939.20	chr2	+	4332	24	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.9275189950196	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	1566	False	NA	6	True	ATTAAA	-17	NA	37333317	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362372_37373817_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.21	chr2	+	4656	25	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	21	-59	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	58.6505659724515	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTATTTCTTTTGTTTG	1577	False	NA	-52	True	AGTAAA	-6	NA	37333328	37456390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37333469_37359388_37359589_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.22	chr2	+	5021	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_19	67.6898101637167	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTTCATACAAAAGTAG	1579	False	NA	8	True	ATTAAA	-19	NA	37333330	37456450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445491_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.23	chr2	+	3493	21	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	32	3372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.7185042229305	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGGGGCCTTGGCTA	1588	False	NA	NA	False	AATAAA	-17	NA	37333339	37438346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37336949_37337064_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37437555
ES.18939.26	chr2	+	2031	8	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	-46	56592	-46	204	5prime_fragment	FALSE	canonical	3	120	junction_1	54.1818555365886	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTAGGAGGTATTA	NA	False	NA	NA	False	NA	NA	NA	37342210	37378382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523
ES.18939.27	chr2	+	4993	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-55	-91	-33	91	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGCCCATGGCCCTTA	NA	False	NA	115	True	AGTAAA	-19	NA	37342223	37456557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.28	chr2	+	4741	26	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8404094986928	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	NA	False	NA	6	True	ATTAAA	-17	NA	37342227	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.29	chr2	+	4349	26	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-15	-379	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8404094986928	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATATGCTGACAAGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	37342241	37456070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.3	chr2	+	5109	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0018666344044	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTTCATACAAAAGTAG	1530	False	NA	8	True	ATTAAA	-19	NA	37333281	37456450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333595_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.31	chr2	+	4617	25	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	69.5551340065323	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATTGCTTCATACAAA	NA	False	NA	3	True	ATTAAA	-14	NA	37342245	37456445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.32	chr2	+	3518	1	FSM	ENSMUSG00000035437.16	ENSMUST00000203470.2	2153	1	599	-1964	-10	1964	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGATTAAAGGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	37342246	37345764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342200_37345800
ES.18939.33	chr2	+	2273	13	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	-3	35500	-3	324	5prime_fragment	FALSE	canonical	3	120	junction_1	43.2925288653314	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTGGCTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	37342253	37399474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939
ES.18939.35	chr2	+	5083	27	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.9937497558403	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGCTTCATACAAAAG	NA	False	NA	5	True	ATTAAA	-16	NA	37342255	37456447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359527_37359589_37362306_37362527_37362943_37363315_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.36	chr2	+	4224	19	FSM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	-1	24	-1	-24	multi-exon	FALSE	canonical	3	120	junction_1	35.7809263624913	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37342255	37434950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114
ES.18939.4	chr2	+	4596	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	-9	380	-3	-380	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTATATGCTGACAAGT	1536	False	NA	NA	False	ATTAAA	-20	NA	37333287	37456069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.41	chr2	+	1575	1	FSM	ENSMUSG00000035437.16	ENSMUST00000203470.2	2153	1	610	-32	1	32	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATCAGATCAGTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	37342257	37343832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342300_37343800
ES.18939.44	chr2	+	5271	25	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	2	-3	intron_retention	FALSE	canonical	3	120	junction_1	34.4192896498461	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATTGCTTCATACAAAA	NA	False	NA	4	True	ATTAAA	-15	NA	37342258	37456446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.45	chr2	+	4867	26	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	58.919253219979	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTGCTTCATACA	NA	False	NA	1	True	ATTAAA	-12	NA	37342258	37456443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451880_37451976_37453447_37453646_37454776
ES.18939.46	chr2	+	4852	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-20	15	2	2	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTCATACAAAAGTAGT	NA	False	NA	9	True	ATTAAA	-20	NA	37342258	37456451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.47	chr2	+	3307	20	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	2	3374	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_19	62.4127535088304	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGGGCCTTGGCTACT	NA	False	NA	NA	False	AATAAA	-19	NA	37342258	37438348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37437555
ES.18939.5	chr2	+	4974	26	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	75.5303806424938	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	1537	False	NA	6	True	ATTAAA	-17	NA	37333288	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379745_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431041_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.51	chr2	+	3988	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	-14	873	8	528	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTTAAAGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	37342264	37455593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.52	chr2	+	5212	27	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.0770141699837	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	NA	False	NA	6	True	ATTAAA	-17	NA	37342266	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37362943_37363315_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.53	chr2	+	4852	26	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	58.9609497888221	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGCTTCATACAAAAG	NA	False	NA	5	True	ATTAAA	-16	NA	37342266	37456447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427401_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.54	chr2	+	4759	25	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	60.2116060240881	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTGCTTCATACA	NA	False	NA	1	True	ATTAAA	-12	NA	37342268	37456443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.56	chr2	+	3048	11	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	23	47775	1	1598	5prime_fragment	FALSE	canonical	3	120	junction_1	47.2063555043174	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGTGTGCTTTTTCTT	NA	False	NA	NA	False	AATAAA	-36	NA	37342279	37387199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594
ES.18939.57	chr2	+	4803	26	NNC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	75.2148921424474	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGCTTCATACAAAAGT	NA	False	NA	6	True	ATTAAA	-17	NA	37342286	37456448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373888_37377077_37377189_37377523_37377591_37379750_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.59	chr2	+	3016	13	NNC	ENSMUSG00000035437.16	novel	4247	19	NA	NA	15	1111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	78.8646872110001	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTTTGAAACTGTTAA	NA	False	NA	NA	False	AAGAAA	-36	NA	37342293	37400261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373894_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939
ES.18939.6	chr2	+	2106	8	ISM	ENSMUSG00000035437.16	ENSMUST00000133434.8	1594	11	4	7215	-2	208	5prime_fragment	FALSE	canonical	3	116	junction_1	55.4962767642468	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAGGAGGTATTATTTT	1543	False	NA	NA	False	NA	NA	NA	37333294	37378386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523
ES.18939.60	chr2	+	177	1	Intergenic	novelGene_15706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	37355101	37355278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37355100_37355300
ES.18939.61	chr2	+	163	1	Intergenic	novelGene_15707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37356825	37356988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37356800_37357000
ES.18939.62	chr2	+	4373	23	ISM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	21310	21	-17288	-4	3prime_fragment	FALSE	canonical	3	214	junction_6	19.6573961434493	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATTGCTTCATACAAA	NA	False	NA	3	True	ATTAAA	-14	NA	37363588	37456445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.63	chr2	+	2631	16	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	-15575	3376	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	59.2786264648191	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGCCTTGGCTACTAA	NA	False	NA	NA	False	AATAAA	-21	NA	37365301	37438350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37437555
ES.18939.64	chr2	+	8342	2	NNC	ENSMUSG00000035437.16	novel	1746	8	NA	NA	-10870	2246	intron_retention	TRUE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCCACCACCACCACC	NA	False	NA	NA	False	NA	NA	NA	37370006	37401396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37378248_37401295
ES.18939.65	chr2	+	1747	1	FSM	ENSMUSG00000035437.16	ENSMUST00000205186.2	3082	1	-1359	2694	-1359	-2694	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	37379517	37381264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37379500_37381300
ES.18939.66	chr2	+	3556	17	ISM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	39641	19	-23	-2	3prime_fragment	FALSE	canonical	3	217	junction_10	18.5151964612855	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGCTTCATACAAAAG	NA	False	NA	5	True	ATTAAA	-16	NA	37381919	37456447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.67	chr2	+	3214	15	ISM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	50599	16	10935	1	3prime_fragment	FALSE	canonical	3	217	junction_8	18.2482875908947	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTTCATACAAAAGTAG	NA	False	NA	8	True	ATTAAA	-19	NA	37392877	37456450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.68	chr2	+	2873	1	Intergenic	novelGene_15709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTATGATGTGAGAAAA	NA	False	NA	NA	False	AGTAAA	-21	NA	37413182	37416055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37413200_37416100
ES.18939.69	chr2	+	2847	12	ISM	ENSMUSG00000035437.16	ENSMUST00000159092.2	1763	14	20782	-1378	20782	-6	3prime_fragment	FALSE	canonical	3	217	junction_5	20.2529459136645	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTGCTTCATACA	NA	False	NA	1	True	ATTAAA	-12	NA	37427312	37456443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.7	chr2	+	4845	26	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	49.1926823826471	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATGTTTGCATAT	1545	False	NA	24	True	ATTAAA	-35	NA	37333296	37456466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37333469_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.70	chr2	+	4659	1	Genic_Genomic	ENSMUSG00000035437.16	novel	NA	NA	NA	NA	27161	3376	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGCCTTGGCTACTAA	2743	False	NA	NA	False	AATAAA	-21	NA	37433691	37438350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_37433700_37438400
ES.18939.71	chr2	+	6851	1	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	36496	-5188	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCCCTAGCTCCCTAG	NA	False	NA	NA	False	NA	NA	NA	37443026	37449877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_37443000_37449900
ES.18939.72	chr2	+	4952	7	ISM	ENSMUSG00000035437.16	ENSMUST00000159092.2	1763	14	36565	-1378	36565	-6	3prime_fragment	FALSE	canonical	3	256	junction_1	13.4494940012213	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTGCTTCATACA	NA	False	NA	1	True	ATTAAA	-12	NA	37443095	37456443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ES.18939.8	chr2	+	3439	20	NNC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	1	3374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	93.9132917706069	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGGGCCTTGGCTACT	1546	False	NA	NA	False	AATAAA	-19	NA	37333297	37438348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427401_37430428_37430555_37431044_37431193_37432648_37432691_37433114_37433244_37437555
ES.1894.1	chr1	+	2280	1	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	171139985	171142265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171140000_171142300
ES.18940.1	chr2	-	176	1	Intergenic	novelGene_15708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	6112	False	NA	NA	False	NA	NA	NA	37361628	37361452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37361500_37361600
ES.18941.1	chr2	-	5405	1	Antisense	novelGene_ENSMUSG00000035437.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTACAATCTCAGC	4862	False	NA	NA	False	NA	NA	NA	37438275	37432870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_37432900_37438300
ES.18942.1	chr2	-	2299	1	Intergenic	novelGene_15710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTTTGGGTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	37443673	37441374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37441400_37443700
ES.18943.1	chr2	-	5504	1	ISM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	71914	0	11147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGGACTGTTCTGTAC	NA	False	NA	0	True	AATAAA	-25	NA	37465383	37459879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37459900_37465400
ES.18944.1	chr2	+	3407	1	Antisense	novelGene_ENSMUSG00000026915.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAGAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37467543	37470950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_37467500_37471000
ES.18945.1	chr2	+	1908	1	Intergenic	novelGene_15711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAACAGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	37480860	37482768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37480900_37482800
ES.18946.1	chr2	+	156	1	Intergenic	novelGene_15713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6244	False	NA	NA	False	NA	NA	NA	37511642	37511798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37511600_37511800
ES.18947.1	chr2	+	125	1	Intergenic	novelGene_15714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACTTTTTAAATT	3193	False	NA	NA	False	NA	NA	NA	37554580	37554705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37554600_37554700
ES.18948.1	chr2	+	172	1	Intergenic	novelGene_15717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	37567320	37567492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37567300_37567500
ES.18949.10	chr2	-	3376	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	205.625663719894	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	37593392	37473167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37547624_37547752_37593203
ES.18949.21	chr2	-	2927	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-95	312	-22	-312	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATCTTATTATTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	37593382	37473479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.22	chr2	-	3039	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-8	-313	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	205.625663719894	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATCTTATTATTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	37593368	37473480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37547624_37547752_37593203
ES.18949.23	chr2	-	2929	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	8	-316	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATCTTATTATT	NA	False	NA	NA	False	AATAAA	-14	NA	37593863	37473483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
ES.18949.24	chr2	-	4673	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-32	-316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	262.637718135942	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTTATCTTATTATT	NA	False	NA	NA	False	AATAAA	-14	NA	37593319	37473483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37527062_37528949_37530862_37531029_37535482_37535631_37537127_37537298_37593203
ES.18949.25	chr2	-	2987	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-37	-317	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	222.568376232486	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTTTTATCTTATTAT	NA	False	NA	NA	False	AATAAA	-13	NA	37593397	37473484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37523798_37523849_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.26	chr2	-	2821	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	19	-318	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_17	156.356305014051	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTTTTATCTTATTA	NA	False	NA	NA	False	AATAAA	-12	NA	37593341	37473485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593262
ES.18949.28	chr2	-	2929	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-34	-318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.900727978348	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTTTTATCTTATTA	NA	False	NA	NA	False	AATAAA	-12	NA	37593394	37473485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490907_37492941_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.29	chr2	-	2711	17	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	18	-318	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	175.919537271305	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTTTTATCTTATTA	NA	False	NA	NA	False	AATAAA	-12	NA	37593342	37473485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37593203
ES.18949.3	chr2	-	5645	17	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-18	3	intron_retention	FALSE	canonical	0	0	junction_13	170.813494783053	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCTTGTGGCCTTCT	NA	False	NA	-1	True	AATAAA	-17	NA	37593378	37473164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530858_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.30	chr2	-	2949	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-24	-322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	222.18960871792	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATATTGTTTTATCTT	NA	False	NA	NA	False	AATAAA	-8	NA	37593311	37473489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37547463_37547567_37593203
ES.18949.31	chr2	-	971	1	NIC	ENSMUSG00000026915.17	novel	16348	17	NA	NA	2068	-324	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAATATTGTTTTATC	NA	False	NA	NA	False	AATAAA	-6	NA	37474462	37473491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37473500_37474500
ES.18949.32	chr2	-	2771	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-124	497	-51	-497	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGCCTGGTTCCTGAT	NA	False	NA	0	True	AATAAA	-20	NA	37593411	37473664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.33	chr2	-	2768	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	1	-498	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	222.568376232486	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGCCTGGTTCCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	37593359	37473665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37523798_37523849_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.34	chr2	-	2818	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-28	-499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	217.4814948847	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593388	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37474222_37474295_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.35	chr2	-	2676	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-17	-499	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_17	156.356305014051	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593377	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593262
ES.18949.37	chr2	-	2696	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	21	-499	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	171.012818475824	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593339	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517530_37525427_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.38	chr2	-	2336	16	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-9	-499	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	181.461719256585	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593369	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37593203
ES.18949.39	chr2	-	2797	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-25	-499	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	205.625663719894	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593312	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37547624_37547752_37593203
ES.18949.40	chr2	-	2658	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	199	-499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	228.082423030583	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593672	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535631_37537127_37537298_37593502
ES.18949.42	chr2	-	2753	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	1	-499	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593870	37473666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
ES.18949.44	chr2	-	2191	15	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-14	-504	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	251.341543379863	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGAGTACTGCCTGGT	NA	False	NA	-7	True	AATAAA	-13	NA	37593374	37473671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37530862_37531029_37593203
ES.18949.48	chr2	-	2556	17	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-3	-505	combination_of_known_splicesites	FALSE	canonical	2	26	junction_5	169.450905500679	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACAGAGTACTGCCTGG	NA	False	NA	-8	True	AATAAA	-12	NA	37593363	37473672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.5	chr2	-	3223	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	170.74009467842	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTCTTGTGGCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	37593368	37473166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486850_37489128_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.52	chr2	-	2593	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	7	-506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.725178298897	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACAGAGTACTGCCTG	NA	False	NA	-9	True	AATAAA	-11	NA	37593353	37473673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493036_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.55	chr2	-	2447	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-113	810	-40	-810	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTTATCCTGCTTTCT	NA	False	NA	NA	False	AATACA	-27	NA	37593400	37473977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.56	chr2	-	3313	7	NIC	ENSMUSG00000026915.17	novel	16348	17	NA	NA	21929	-12073	intron_retention	FALSE	canonical	3	591	junction_4	44.458470009162	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATGTGTTGAAC	NA	False	NA	NA	False	NA	NA	NA	37515302	37485240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37486857_37489132_37489268_37490756_37490916_37492946_37494027_37514184_37514297_37514504_37514603_37515189
ES.18949.57	chr2	-	576	1	Intergenic	novelGene_15712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	37501146	37500570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37500600_37501100
ES.18949.58	chr2	-	1373	5	FSM	ENSMUSG00000026915.17	ENSMUST00000135488.2	1355	5	-17	-1	-17	1	multi-exon	FALSE	canonical	3	610	junction_2	32.6678358634299	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTTTACTCAATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	37593377	37524938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ES.18949.59	chr2	-	319	1	Intergenic	novelGene_15715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCTCTGTGGACCTTT	NA	False	NA	NA	False	NA	NA	NA	37560646	37560327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37560300_37560600
ES.18949.60	chr2	-	176	1	Intergenic	novelGene_15716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	37560644	37560468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37560500_37560600
ES.18949.61	chr2	-	1342	1	Intergenic	novelGene_15718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAGAAAAAGCATCAAGA	9606	False	NA	NA	False	AAAAAG	-9	NA	37573448	37572106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37572100_37573400
ES.18949.62	chr2	-	175	1	FSM	ENSMUSG00000092958.3	ENSMUST00000175217.3	84	1	58	-149	58	149	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGCAA	7642	False	NA	NA	False	NA	NA	NA	37578238	37578063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37578100_37578200
ES.18949.63	chr2	-	2702	1	Intergenic	novelGene_15719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGTGTGATGGCACAT	7038	False	NA	NA	False	NA	NA	NA	37585691	37582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37583000_37585700
ES.1895.1	chr1	+	1836	6	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	-9109	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.712531193582	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGCTGTGGCCCTTTG	NA	False	NA	24	True	TTTAAA	-4	NA	171147603	171169256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171147780_171156311_171156467_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.10	chr1	+	2233	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	326	4	63	2	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCACTTTTCTGAAA	1518	False	NA	NA	False	AATAAA	-13	NA	171157038	171169895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.11	chr1	+	1598	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-16	-733	-16	0	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1641	False	NA	18	True	NA	NA	NA	171157161	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.12	chr1	+	3209	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-4	941	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCCAGCTTCTATTT	1653	False	NA	NA	False	NA	NA	NA	171157173	171170840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.13	chr1	+	3173	5	NNC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-4	941	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.792987025584	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCCAGCTTCTATTT	1653	False	NA	NA	False	NA	NA	NA	171157173	171170840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167905_171168395
ES.1895.14	chr1	+	2252	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	-4	-1399	-4	17	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTGAGGTCAGGTCA	1653	False	NA	NA	False	AATAAA	-34	NA	171157173	171169916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.15	chr1	+	1618	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1654	False	NA	18	True	NA	NA	NA	171157174	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.17	chr1	+	2311	6	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	98	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	92.7607675690537	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCACTTTTCTGAAA	1755	False	NA	NA	False	AATAAA	-13	NA	171157275	171169895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171157410_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.18	chr1	+	1660	6	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	104	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	92.7607675690537	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1761	False	NA	18	True	NA	NA	NA	171157281	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171157410_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.19	chr1	+	1650	6	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	-200	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.9804146688271	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAAGTGTATTTTGGA	1933	False	NA	10	True	AGTAAA	-21	NA	171157453	171169192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171157539_171158729_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.2	chr1	+	1550	5	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	-299	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	103.409380618975	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGGGACTCTGAAGTG	893	False	NA	1	True	AGTAAA	-12	NA	171156413	171169183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171156532_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.20	chr1	+	1584	6	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.9804146688271	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1966	False	NA	18	True	NA	NA	NA	171157486	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171157539_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.21	chr1	+	1748	6	NIC	ENSMUSG00000013973.13	novel	815	3	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	94.9041621848062	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	2439	False	NA	18	True	NA	NA	NA	171157959	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171158176_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.22	chr1	+	2116	5	ISM	ENSMUSG00000013973.13	ENSMUST00000111299.8	2322	6	1270	643	314	0	3prime_fragment	FALSE	canonical	3	134	junction_1	47.1937495861475	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	2716	False	NA	18	True	NA	NA	NA	171158236	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.23	chr1	+	5332	5	NNC	ENSMUSG00000013973.13	novel	815	3	NA	NA	2438	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.140382346651	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGTGAGTAAAGGAGCT	784	False	NA	-24	True	NA	NA	NA	171161431	171169158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171165357_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.24	chr1	+	2641	4	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	5684	-66	319	0	3prime_fragment	FALSE	canonical	3	237	junction_2	4.18993502999218	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	4030	False	NA	18	True	NA	NA	NA	171164677	171169250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.25	chr1	+	2145	4	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	6824	-710	283	1	3prime_fragment	FALSE	canonical	3	237	junction_2	4.18993502999218	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCCCACTTTTCTGAA	5170	False	NA	NA	False	AATAAA	-12	NA	171165817	171169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.26	chr1	+	821	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	-165	1079	-165	205	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAACCTTTATCTCAT	NA	False	NA	34	True	NA	NA	NA	171173072	171185743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ES.1895.27	chr1	+	1886	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	-152	1	-152	-1	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGCTCTATTTTTTG	NA	False	NA	4	True	NA	NA	NA	171173085	171186821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ES.1895.28	chr1	+	1655	3	ISM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-44	233	16	199	intron_retention	FALSE	canonical	3	1973	junction_1	81	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATAGCCTGAACCTTTA	NA	False	NA	28	True	NA	NA	NA	171173253	171185737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171173355_171184097_171184187_171184272
ES.1895.29	chr1	+	682	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-30	233	-30	199	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATAGCCTGAACCTTTA	NA	False	NA	28	True	NA	NA	NA	171173267	171185737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
ES.1895.3	chr1	+	2010	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	-386	-6	-123	6	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGCTGTGGCCCTTTG	1069	False	NA	24	True	TTTAAA	-4	NA	171156589	171169256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.30	chr1	+	606	4	NNC	ENSMUSG00000006412.11	novel	1735	4	NA	NA	-30	191	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	941.834144398872	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTAGCTATAGCCTG	NA	False	NA	20	True	NA	NA	NA	171173267	171185729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171173355_171184097_171184187_171184272_171184397_171185423
ES.1895.31	chr1	+	3922	2	Fusion	ENSMUSG00000102929.2_ENSMUSG00000006412.11	novel	474	3	NA	NA	44	191	intron_retention	FALSE	canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTAGCTATAGCCTG	7283	False	NA	20	True	NA	NA	NA	171181737	171185729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171183755_171183824
ES.1895.32	chr1	+	177	1	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTCTTTAAGTC	8547	False	NA	NA	False	NA	NA	NA	171183001	171183178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171183000_171183200
ES.1895.4	chr1	+	1755	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	198	610	-56	39	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTGCTGCTCCTCTCT	1390	False	NA	57	True	TTTAAA	-37	NA	171156910	171169289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.5	chr1	+	2358	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	-65	-675	-56	26	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGGTCAAAGTCTCTT	1390	False	NA	NA	False	AATAAA	-43	NA	171156910	171169925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.6	chr1	+	4186	9	Fusion	ENSMUSG00000013973.13_ENSMUSG00000006412.11	novel	2563	6	NA	NA	3	199	intron_retention	FALSE	canonical	0	0	junction_5	800.696415628295	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATAGCCTGAACCTTTA	1449	False	NA	28	True	NA	NA	NA	171156969	171185737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395_171171052_171172349_171172578_171184097_171184187_171184272_171184397_171185417
ES.1895.7	chr1	+	1577	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	271	715	8	0	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGACTCTGAAGTGT	1463	False	NA	2	True	AGTAAA	-13	NA	171156983	171169184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.8	chr1	+	3209	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	300	-946	37	946	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTTCTATTTTGTTT	1492	False	NA	NA	False	NA	NA	NA	171157012	171170845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.1895.9	chr1	+	4777	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	54	-3213	54	2564	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACGAAATATGTTACCT	1509	False	NA	NA	False	AATAAA	-34	NA	171157029	171172463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ES.18950.1	chr2	+	176	1	Intergenic	novelGene_15720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	37627535	37627711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37627500_37627700
ES.18951.1	chr2	+	180	1	Intergenic	novelGene_15721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	37628160	37628340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37628200_37628300
ES.18952.1	chr2	+	4250	13	NNC	ENSMUSG00000035403.11	novel	1132	4	NA	NA	-4616	438	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.87082869338697	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTAATGTGTTATGA	NA	False	NA	NA	False	NA	NA	NA	37661644	37687066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37661770_37673211_37673536_37676450_37676647_37676729_37676870_37677275_37677462_37677670_37677785_37680139_37681013_37681097_37681604_37682065_37682232_37683110_37683880_37684541_37684659_37685386_37685514_37686459
ES.18952.2	chr2	+	6130	14	NNC	ENSMUSG00000035403.11	novel	6372	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.87477809337753	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGACTTGGGCTCAG	NA	False	NA	NA	False	AAAAAG	-45	NA	37666273	37689115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_37666459_37673211_37673305_37673420_37673536_37676450_37676647_37676729_37676870_37677388_37677462_37677670_37677785_37680139_37681013_37681097_37681604_37682065_37682232_37683110_37683880_37684541_37684659_37685386_37685514_37686459
ES.18952.3	chr2	+	6331	13	FSM	ENSMUSG00000035403.11	ENSMUST00000050372.10	6372	13	41	0	41	0	multi-exon	FALSE	canonical	0	0	junction_2	1.80084856541453	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGACTTGGGCTCAG	NA	False	NA	NA	False	AAAAAG	-45	NA	37666301	37689115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_37666459_37673211_37673536_37676450_37676647_37676729_37676870_37677275_37677462_37677670_37677785_37680139_37681013_37681097_37681604_37682065_37682232_37683110_37683880_37684541_37684659_37685386_37685514_37686459
ES.18953.1	chr2	+	195	1	Intergenic	novelGene_15727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTCCTCAGCATTAGGA	NA	False	NA	NA	False	NA	NA	NA	37826884	37827079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37826900_37827100
ES.18954.1	chr2	+	3922	1	Intergenic	novelGene_15730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAACCTATCCTAATCAG	NA	False	NA	NA	False	ATTAAA	-31	NA	37964487	37968409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_37964500_37968400
ES.18955.1	chr2	+	2115	1	Intergenic	novelGene_15732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGTTTCCAAGATCACA	NA	False	NA	NA	False	ATTAAA	-43	NA	38042403	38044518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38042400_38044500
ES.18956.1	chr2	+	7958	1	Intergenic	novelGene_15734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTTTAAAAGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	38164079	38172037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38164100_38172000
ES.18957.1	chr2	-	196	1	Intergenic	novelGene_15722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	37662510	37662314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37662300_37662500
ES.18958.1	chr2	-	156	1	Intergenic	novelGene_15723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAATAATAA	2674	False	NA	NA	False	NA	NA	NA	37675224	37675068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37675100_37675200
ES.18959.1	chr2	-	4425	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-62	-21	-47	21	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGAGACATGCAGGAAA	NA	False	NA	22	True	AATAAA	-39	NA	38177449	37688981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.10	chr2	-	4368	22	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	66	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.3200156357516	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTGACCGTTTAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	38177304	37689007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37862743_37862908_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38049818_38049863_38133413_38133485_38177124
ES.18959.11	chr2	-	4223	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	16.6961073307523	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTGACCGTTTAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	38177375	37689007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.13	chr2	-	4495	22	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	24.6292232816178	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGACTGACCGTTTAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	38177366	37689008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38031149_38031376_38049818_38049863_38133413_38133485_38177124
ES.18959.15	chr2	-	4581	24	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	27.0870612043479	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177394	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38056061_38056192_38133413_38133485_38171894_38172007_38177124
ES.18959.16	chr2	-	4256	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-3	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	17.8846302729467	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177392	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.17	chr2	-	4414	22	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	3	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	24.3810453867274	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177384	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37695083_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38133413_38133485_38177124
ES.18959.18	chr2	-	4431	23	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	21.8579656225602	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177398	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38056061_38056150_38133413_38133485_38177124
ES.18959.19	chr2	-	4139	22	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-9277	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_21	17.026989380009	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	6992	False	NA	-9	True	AATAAA	-8	NA	38142759	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38142689
ES.18959.20	chr2	-	4248	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-4	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	17.6784473300118	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177374	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38177124
ES.18959.21	chr2	-	4160	20	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	26.1572063872153	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	False	NA	-9	True	AATAAA	-8	NA	38177396	37689012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049817_38049863_38177124
ES.18959.22	chr2	-	4261	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-1	-12	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	17.4714052096561	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACACAGACTGACCGT	NA	False	NA	-11	True	AATAAA	-6	NA	38177388	37689014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.23	chr2	-	4274	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-13	81	2	-81	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTTTTCCTTTTTAC	NA	False	NA	-27	True	AATGAA	-23	NA	38177400	37689083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.24	chr2	-	924	7	NIC	ENSMUSG00000035392.18	novel	1794	19	NA	NA	-5613	-3632	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.7498148139003	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCGTCTCTGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	37748065	37694715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029
ES.18959.25	chr2	-	13290	20	ISM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-1	6459	-1	-4378	5prime_fragment	FALSE	canonical	3	53	junction_2	9.72445869716709	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38177388	37695461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.26	chr2	-	4532	1	Intergenic	novelGene_15724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTTCGATGGTTCATC	23	False	NA	NA	False	AATAAA	-14	NA	37703842	37699310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37699300_37703800
ES.18959.27	chr2	-	5599	19	NNC	ENSMUSG00000035392.18	novel	1794	19	NA	NA	32	7615	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8392584167005	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTTTTCGATGGTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	38133450	37699312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37703436_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38049818_38049863_38133413
ES.18959.28	chr2	-	2241	1	Intergenic	novelGene_15725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTCAGCACTTCATT	1756	False	NA	NA	False	ATTAAA	-13	NA	37702109	37699868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37699900_37702100
ES.18959.29	chr2	-	1949	19	NNC	ENSMUSG00000035392.18	novel	1794	19	NA	NA	-2	7058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8206389399229	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTCAGCACTTCAT	NA	False	NA	NA	False	ATTAAA	-12	NA	38177391	37699869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37700162_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38049818_38049863_38133413_38133485_38177124
ES.18959.3	chr2	-	4282	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	14.3993055388099	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGACCGTTTAAGAAAACA	NA	False	NA	0	True	AATAAA	-17	NA	38177378	37689003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38049818_38049863_38133413_38133485_38177124
ES.18959.30	chr2	-	2626	1	Intergenic	novelGene_15726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTGAACACATTACAGAA	NA	False	NA	NA	False	AATACA	-14	NA	37817446	37814820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37814800_37817400
ES.18959.31	chr2	-	2955	12	ISM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	-11	160819	4	-23146	5prime_fragment	FALSE	canonical	3	63	junction_5	6.15099266328628	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38177398	37849821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.32	chr2	-	1608	1	Intergenic	novelGene_15728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37857694	37856086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37856100_37857700
ES.18959.33	chr2	-	6682	8	ISM	ENSMUSG00000035392.18	ENSMUST00000150896.8	1036	10	-15	40582	-2	-40537	5prime_fragment	FALSE	canonical	0	0	junction_3	27.001133763044	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38177404	37867212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_37873118_37893385_37893487_37911367_37911479_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.34	chr2	-	188	1	Intergenic	novelGene_15729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1367	False	NA	NA	False	NA	NA	NA	37895240	37895052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37895100_37895200
ES.18959.35	chr2	-	1145	1	Intergenic	novelGene_15731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTATTTTACAGGTAGTT	2331	False	NA	NA	False	AATAAA	-22	NA	37973038	37971893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_37971900_37973000
ES.18959.36	chr2	-	1711	1	Intergenic	novelGene_15733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	38060945	38059234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38059200_38060900
ES.18959.37	chr2	-	5126	1	Genic_Genomic	ENSMUSG00000035392.18	novel	NA	NA	NA	NA	5690	4708	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38127792	38122666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_38122700_38127800
ES.18959.38	chr2	-	4424	1	Intergenic	novelGene_15735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTCCAAATAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	38174511	38170087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38170100_38174500
ES.18959.39	chr2	-	2971	1	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-8	-47033	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGCATAATTGTGAAG	NA	False	NA	NA	False	AATAAA	-18	NA	38177378	38174407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38174400_38177400
ES.18959.4	chr2	-	4456	23	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	21.5389326530985	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177391	37689004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38171894_38172007_38177124
ES.18959.5	chr2	-	4325	21	NNC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.7283404050864	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177378	37689004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37862743_37862908_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38049818_38049863_38133413_38133485_38177124
ES.18959.6	chr2	-	4256	20	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	18.274151097601	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACCGTTTAAGAAAAC	NA	False	NA	-1	True	AATAAA	-16	NA	38177397	37689004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38133413_38133485_38177124
ES.18959.7	chr2	-	4473	23	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	20.1983961395842	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGACCGTTTAAGAAAA	NA	False	NA	-2	True	AATAAA	-15	NA	38177392	37689005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37695083_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ES.18959.8	chr2	-	4196	20	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	18.3463145513678	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGACCGTTTAAGAAAA	NA	False	NA	-2	True	AATAAA	-15	NA	38177414	37689005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38049818_38049863_38133413_38133485_38177124
ES.18959.9	chr2	-	4171	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	17.917868176767	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTGACCGTTTAAGAA	NA	False	NA	-4	True	AATAAA	-13	NA	38177265	37689007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38133413_38133485_38177124
ES.1896.1	chr1	-	4317	2	Genic_Genomic	ENSMUSG00000103983.2	novel	5577	1	NA	NA	-3012	-4065	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGCCCTATCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	171156757	171152233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_171154397_171154603
ES.1896.3	chr1	-	4078	2	Genic_Genomic	ENSMUSG00000103983.2	novel	5577	1	NA	NA	-2765	-4065	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGCCCTATCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	171156510	171152233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_171154397_171154595
ES.18960.1	chr2	+	3077	1	Intergenic	novelGene_15736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAGAGTAAAGG	NA	False	NA	NA	False	NA	NA	NA	38218286	38221363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38218300_38221400
ES.18961.1	chr2	+	2315	5	NNC	ENSMUSG00000000247.12	novel	2840	5	NA	NA	440	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.73861278752583	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCCCCTCCAACGGTC	NA	False	NA	-94	True	NA	NA	NA	38241210	38259636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38241906_38243322_38243526_38244436_38244865_38249909_38250116_38258853
ES.18962.1	chr2	-	134	1	Intergenic	novelGene_15737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	38331507	38331373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38331400_38331500
ES.18963.1	chr2	-	177	1	Intergenic	novelGene_15738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	38343492	38343315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38343300_38343500
ES.18964.1	chr2	-	179	1	Intergenic	novelGene_15739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGATGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	38348138	38347959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38348000_38348100
ES.18965.1	chr2	-	192	1	Intergenic	novelGene_15740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATGAATAAAA	NA	False	NA	NA	False	NA	NA	NA	38387492	38387300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38387300_38387500
ES.18966.1	chr2	+	2217	9	NIC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	-28	810	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	98.713917458482	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGGAAACAGTCTGAAT	NA	False	NA	21	True	TATAAA	-25	NA	38401626	38476588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_38401806_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.10	chr2	+	2828	10	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	25	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	95.1431669759958	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGTTTGCACAAGGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	38401704	38477230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475363
ES.18966.11	chr2	+	2902	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	50	7386	25	-260	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTGCACAAGGGAATC	NA	False	NA	NA	False	AATAAA	-19	NA	38401704	38477232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.13	chr2	+	3997	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	56	6285	31	841	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGCCCAACGGAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	38401710	38478333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.14	chr2	+	11201	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	57	-920	32	920	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTAGAGAGTTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	38401711	38485538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.15	chr2	+	2159	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	58	8121	33	719	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGAAATATGTTCAT	NA	False	NA	-70	True	ATTAAA	-23	NA	38401712	38476497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.16	chr2	+	2336	13	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	34	32884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	128.027991730975	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTTATTACAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	38401713	38517502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476512_38513358_38513429_38513929_38513982_38517460
ES.18966.17	chr2	+	1640	11	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	37	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.793530710135	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCGCTAATATTTTTCT	NA	False	NA	8	True	NA	NA	NA	38401716	38475843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38416098_38416238_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.18	chr2	+	2415	11	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	44	803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.742115527727	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTGCTGGAGGAAACAG	NA	False	NA	14	True	TATAAA	-18	NA	38401723	38476581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38440564_38440684_38447827_38447969_38448146_38448330_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.19	chr2	+	3695	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	73	6570	48	556	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTTGTCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	38401727	38478048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.2	chr2	+	2594	11	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	-3	-762	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	115.413560728365	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAATTTTATAGCTGG	NA	False	NA	NA	False	NA	NA	NA	38401651	38476730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38413962_38414104_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.20	chr2	+	6461	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	80	3797	55	3329	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATAGCCTCACTCACTA	NA	False	NA	NA	False	ATTAAA	-10	NA	38401734	38480821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.21	chr2	+	1413	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	83	8842	58	-2	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGGCTGTGTGCTTCAT	NA	False	NA	-59	True	NA	NA	NA	38401737	38475776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.22	chr2	+	2285	10	FSM	ENSMUSG00000026749.12	ENSMUST00000112895.8	1513	10	45	-817	45	817	multi-exon	FALSE	canonical	1	1	junction_1	94.3328752769929	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGAATTTTGTTC	NA	False	NA	28	True	TATAAA	-32	NA	38401870	38476595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401992_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.23	chr2	+	2304	10	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	20289	-832	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	91.2068602574647	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGTCTCCAAAGATAT	NA	False	NA	93	True	NA	NA	NA	38424926	38476660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38425002_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.24	chr2	+	2087	9	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	39440	803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.713917458482	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTGCTGGAGGAAACAG	NA	False	NA	14	True	TATAAA	-18	NA	38444077	38476581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38444134_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.25	chr2	+	2006	9	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	42466	719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.713917458482	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGAAATATGTTCAT	NA	False	NA	-70	True	ATTAAA	-23	NA	38447103	38476497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38447163_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.26	chr2	+	1335	9	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	42492	74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.713917458482	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTCTCTGCATTTT	NA	False	NA	17	True	NA	NA	NA	38447129	38475852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38447163_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.27	chr2	+	6880	5	NIC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	46253	805	intron_retention	FALSE	canonical	3	288	junction_2	6.13901457890434	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTGGAGGAAACAGTC	NA	False	NA	16	True	TATAAA	-20	NA	38450890	38476583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_38451004_38458858_38458968_38459639_38459748_38467250_38472509_38475291
ES.18966.28	chr2	+	3304	3	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	65697	815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACAGTCTGAATTTTGT	NA	False	NA	26	True	TATAAA	-30	NA	38470334	38476593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38471799_38471970_38472509_38475291
ES.18966.29	chr2	+	1618	2	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	71202	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGGACAATCACTATC	2709	False	NA	12	True	AATAAA	-23	NA	38475839	38477502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38477275_38477319
ES.18966.3	chr2	+	3105	10	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	95.1431669759958	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTACAGTCTCCACTGG	NA	False	NA	0	True	AATAAA	-11	NA	38401687	38477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475363
ES.18966.30	chr2	+	5002	1	ISM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	76327	1635	73344	-1635	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGTATAATTTGATCC	4851	False	NA	NA	False	AGTAAA	-45	NA	38477981	38482983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_38478000_38483000
ES.18966.31	chr2	+	3871	1	FSM	ENSMUSG00000082931.2	ENSMUST00000121784.2	464	1	-2723	-684	-2723	684	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATAACATTAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	38510089	38513960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38510100_38514000
ES.18966.4	chr2	+	3223	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	33	7082	8	44	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTAATTACTG	NA	False	NA	46	True	NA	NA	NA	38401687	38477536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.5	chr2	+	1580	7	ISM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	34	24059	9	9637	5prime_fragment	FALSE	canonical	3	219	junction_1	30.9071189210512	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTCTACTCATTTC	NA	False	NA	NA	False	NA	NA	NA	38401688	38460559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639
ES.18966.6	chr2	+	1528	11	NNC	ENSMUSG00000026749.12	novel	10338	10	NA	NA	18	74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	117.599702380576	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTCTCTGCATTTT	NA	False	NA	17	True	NA	NA	NA	38401697	38475852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38401806_38440564_38440667_38441132_38441151_38447829_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.7	chr2	+	1593	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	46	8699	21	141	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGTGGCATCTGGGAG	NA	False	NA	21	True	AGTAAA	-25	NA	38401700	38475919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18966.8	chr2	+	2293	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	46	7999	21	841	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGTGGGTCTCACTTT	NA	False	NA	52	True	NA	NA	NA	38401700	38476619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ES.18967.1	chr2	+	860	1	Antisense	novelGene_ENSMUSG00000026750.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCTGACGCTCAGAC	NA	False	NA	NA	False	AATAAA	-16	NA	38533314	38534174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_38533300_38534200
ES.18968.1	chr2	-	1511	3	Intergenic	novelGene_15741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCACGAGATCTCACATT	NA	False	NA	NA	False	CATAAA	-18	NA	38436273	38411633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38412785_38435767_38435890_38436035
ES.18969.1	chr2	-	1025	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	154	-19	-13	19	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGCGTTTGGGCTCC	2367	False	NA	1	True	AATAAA	-43	NA	38533945	38478028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ES.18969.6	chr2	-	3402	3	ISM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	27628	31	27461	-31	3prime_fragment	FALSE	canonical	3	1662	junction_2	110	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAAAGA	5082	False	NA	-49	True	AAAACA	-23	NA	38506471	38478078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38478301_38480708_38480861_38503443
ES.18969.8	chr2	-	175	1	Intergenic	novelGene_15742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	38495004	38494829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38494800_38495000
ES.1897.1	chr1	-	3037	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	4	0	-2	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTGACTTGGTTCA	882	False	NA	2	True	ATTAAA	-23	NA	171173210	171168138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ES.1897.10	chr1	-	1661	7	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	11	-20	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	910	False	NA	-30	True	NA	NA	NA	171173182	171169831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
ES.1897.11	chr1	-	1173	6	NNC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	3	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.4408398065195	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	902	False	NA	-30	True	NA	NA	NA	171173190	171169831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171170366_171171254_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ES.1897.12	chr1	-	1853	6	NNC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	3	-20	intron_retention	FALSE	canonical	0	0	junction_5	55.5172045405746	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	902	False	NA	-30	True	NA	NA	NA	171173190	171169831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172102_171172481
ES.1897.13	chr1	-	1648	7	NNC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	3	-20	intron_retention	FALSE	canonical	1	1	junction_6	51.8652099195598	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	902	False	NA	-30	True	NA	NA	NA	171173190	171169831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172779
ES.1897.3	chr1	-	3042	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	-36	-1671	-35	-2	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTCTTGACTTGGTT	843	False	NA	0	True	ATTAAA	-21	NA	171173249	171168140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ES.1897.4	chr1	-	3671	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	17	-756	2	-2	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTCTTGACTTGGTT	901	False	NA	0	True	ATTAAA	-21	NA	171173191	171168140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
ES.1897.5	chr1	-	3376	7	NIC	ENSMUSG00000013997.11	novel	3041	7	NA	NA	1	-8	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTAATTCTGTCTTGAC	880	False	NA	-6	True	ATTAAA	-15	NA	171173212	171168146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
ES.1897.6	chr1	-	1359	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	-15	-9	-14	9	multi-exon	FALSE	canonical	3	74	junction_6	27.0025718939676	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTTTGGGGGCTA	864	False	NA	-1	True	AATATA	-17	NA	171173228	171169802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ES.1897.8	chr1	-	1397	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	-22	1666	-22	7	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATGTCTTTTGGGGGC	856	False	NA	-3	True	AATATA	-15	NA	171173236	171169804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ES.1897.9	chr1	-	2001	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	-4	935	1	-20	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	880	False	NA	-30	True	NA	NA	NA	171173212	171169831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
ES.18970.1	chr2	+	4998	13	NNC	ENSMUSG00000083722.3	novel	2918	21	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_5	2.28977194400568	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGCAAGCTCTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	38559396	38574414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562032_38563470_38563610_38564005_38565772_38565917_38566483_38566589_38567086_38567191_38569500_38571556_38571788_38571943_38572601_38572671_38573592_38573681_38574206
ES.18970.2	chr2	+	4388	7	NNC	ENSMUSG00000083722.3	novel	2918	21	NA	NA	-21	3002	intron_retention	FALSE	canonical	1	1	junction_4	2.35702260395516	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGACTTATTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	38559407	38569566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562032_38565917_38566483_38566589_38567086_38567191_38569500
ES.18970.3	chr2	+	4008	15	NNC	ENSMUSG00000083722.3	novel	2888	22	NA	NA	3	140	intron_retention	FALSE	non_canonical	0	0	junction_3	2.36578502309703	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCACAGAGAAATGGGC	NA	False	NA	NA	False	NA	NA	NA	38559431	38574554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562046_38564005_38564936_38565049_38565361_38565851_38566483_38566589_38567086_38567191_38569500_38569557_38569881_38570060_38571460_38571556_38571788_38571943_38572554_38572671_38573592_38573681_38574206
ES.18970.4	chr2	+	5359	10	NNC	ENSMUSG00000083722.3	novel	2918	21	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	2.53859103528797	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGCAAGCTCTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	38559431	38574414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562046_38562651_38565664_38565851_38566483_38566589_38567086_38567191_38569500_38571556_38571788_38573681_38574206
ES.18970.5	chr2	+	1428	4	NNC	ENSMUSG00000083722.3	novel	2918	21	NA	NA	20	-3292	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1.69967317119759	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATGTCACAGATATGC	NA	False	NA	NA	False	NA	NA	NA	38559448	38563272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38559477_38560826_38560923_38561172_38561237_38562032
ES.18970.6	chr2	+	5186	7	NIC	ENSMUSG00000083722.3	novel	1375	11	NA	NA	639	-3	intron_retention	FALSE	canonical	0	0	junction_4	1.52752523165195	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGGGCAAGCTCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	38563187	38574411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_38565917_38566483_38566589_38567086_38567191_38569500_38569557_38571460_38571556_38571788_38573681_38574206
ES.18970.7	chr2	+	3161	4	NNC	ENSMUSG00000083722.3	novel	1375	11	NA	NA	7601	77	intron_retention	FALSE	canonical	0	0	junction_2	1.69967317119759	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCTGATGCCTGT	NA	False	NA	NA	False	NA	NA	NA	38570149	38574491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38571556_38571788_38571943_38572601_38573681_38573969
ES.18971.1	chr2	+	160	1	Intergenic	novelGene_15745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	38740399	38740559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38740400_38740600
ES.18972.1	chr2	+	176	1	Intergenic	novelGene_15746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	38740974	38741150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38741000_38741200
ES.18973.1	chr2	+	275	1	Intergenic	novelGene_15747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAATTAAAGAAAAAA	NA	False	NA	NA	False	TATAAA	-42	NA	38758046	38758321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38758000_38758300
ES.18974.1	chr2	-	6169	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-168	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	22.851914580621	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTGTGAAGCTTAT	NA	False	NA	-1	True	AATAAA	-21	NA	38816455	38613380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
ES.18974.10	chr2	-	6141	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-105	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	36.0249913254674	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCCATCTGTCTGTGA	NA	False	NA	-8	True	AATAAA	-14	NA	38816392	38613387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775165_38775250_38816129
ES.18974.11	chr2	-	4863	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-225	1303	-167	-1303	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816454	38614688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
ES.18974.12	chr2	-	4826	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-142	-1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.4302192848085	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816429	38614688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650430_38762606_38762652_38775207_38775250_38816129
ES.18974.14	chr2	-	4779	10	NIC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-125	-1303	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	35.7242525775169	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816412	38614688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38816129
ES.18974.17	chr2	-	4731	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-118	-1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.3185081260826	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816405	38614688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816212
ES.18974.19	chr2	-	4547	10	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-97	-1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.9171326009065	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816384	38614688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38762606_38762652_38775207_38775250_38816129
ES.18974.20	chr2	-	4757	10	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-135	-1329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.4389848403357	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	ACTAAA	-36	NA	38816422	38614714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38775207_38775250_38816129
ES.18974.21	chr2	-	4715	12	NNC	ENSMUSG00000063972.14	novel	6334	12	NA	NA	-103	-1329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	35.2300585408737	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	ACTAAA	-36	NA	38816390	38614714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129_38816155_38816209
ES.18974.22	chr2	-	5297	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	43819	1330	-232	-1330	intron_retention	FALSE	canonical	3	100	junction_2	14.5143607047182	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ACTAAA	-35	NA	38630708	38614715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898
ES.18974.23	chr2	-	1871	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-135	4205	-77	-4205	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAATGTGAAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	38816364	38617590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
ES.18974.24	chr2	-	1543	1	Intergenic	novelGene_15743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTCTGAGTTTATG	NA	False	NA	NA	False	NA	NA	NA	38624502	38622959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38623000_38624500
ES.18974.25	chr2	-	178	1	Intergenic	novelGene_15744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	38678633	38678455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38678500_38678600
ES.18974.26	chr2	-	4645	2	ISM	ENSMUSG00000063972.14	ENSMUST00000142130.2	719	6	-135	140343	-135	-98966	5prime_fragment	FALSE	canonical	3	98	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-6	NA	38816422	38770897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38775250_38816129
ES.18974.27	chr2	-	3594	1	Intergenic	novelGene_15748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38810439	38806845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38806800_38810400
ES.18974.3	chr2	-	5916	9	NNC	ENSMUSG00000063972.14	novel	5877	9	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.4930549600793	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTGTGAAGCTTAT	NA	False	NA	-1	True	AATAAA	-21	NA	38674564	38613380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38674404
ES.18974.4	chr2	-	6109	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-120	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.9406280401403	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTGTGAAGCTTAT	NA	False	NA	-1	True	AATAAA	-21	NA	38816407	38613380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650430_38762606_38762652_38775207_38775250_38816129
ES.18974.5	chr2	-	5845	9	NNC	ENSMUSG00000063972.14	novel	5877	9	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.8745874564991	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38816359	38613385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38816268
ES.18974.7	chr2	-	6115	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.4302192848085	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38816382	38613385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650463_38762606_38762652_38775207_38775250_38816129
ES.18975.1	chr2	-	187	1	Intergenic	novelGene_15749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGATCATTTCT	NA	False	NA	NA	False	NA	NA	NA	38818385	38818198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38818200_38818400
ES.18976.1	chr2	+	3902	4	Fusion	ENSMUSG00000035295.11_ENSMUSG00000026755.15	novel	752	4	NA	NA	-119	200	multi-exon	FALSE	non_canonical	0	0	junction_1	449.53704580997	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCGGTGTGTTCTCTGTA	NA	False	NA	22	True	AATAAA	-24	NA	38895240	38905605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
ES.18976.11	chr2	+	5556	4	NNC	ENSMUSG00000026755.15	novel	4167	3	NA	NA	-14	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATCGCGGTGTGTTCTC	NA	False	NA	18	True	AATAAA	-20	NA	38898138	38905601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38900080_38900293_38903200_38903734_38903912_38905069
ES.18976.13	chr2	+	6048	3	FSM	ENSMUSG00000026755.15	ENSMUST00000135049.2	4167	3	-1879	-2	-2	2	multi-exon	FALSE	canonical	3	920	junction_2	32	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTTCAAAAGTCATCCA	NA	False	NA	10	True	AATAAA	-21	NA	38898150	38905891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38903200_38903734_38903912_38905069
ES.18976.14	chr2	+	5623	2	NNC	ENSMUSG00000026755.15	novel	4167	3	NA	NA	-266	195	intron_retention	FALSE	non_canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATCGCGGTGTGTTCT	NA	False	NA	17	True	AATAAA	-19	NA	38899763	38905600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38900080_38900293
ES.18976.2	chr2	+	895	1	ISM	ENSMUSG00000035295.11	ENSMUST00000039535.9	2699	12	7798	0	6942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAGTCTTGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	38895285	38896180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_38895300_38896200
ES.18976.3	chr2	+	8434	3	FSM	ENSMUSG00000035295.11_ENSMUSG00000026755.15	ENSMUST00000135049.2	4167	3	-4554	287	116	197	multi-exon	FALSE	canonical	3	920	junction_2	32	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGCGGTGTGTTCTCT	NA	False	NA	19	True	AATAAA	-21	NA	38895475	38905602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_38903200_38903734_38903912_38905069
ES.18976.4	chr2	+	1370	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	-14	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTTGTGTGATTACAG	NA	False	NA	25	True	AATAAA	-36	NA	38898073	38905906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38898359_38903128_38903200_38903734_38903912_38905069
ES.18976.5	chr2	+	7063	3	NNC	ENSMUSG00000026755.15	novel	4167	3	NA	NA	4	14	intron_retention	TRUE	non_canonical	0	0	junction_1	492	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCCATTTGTGTGATTA	NA	False	NA	22	True	AATAAA	-33	NA	38898091	38905903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38900080_38900293_38903200_38903734
ES.18976.6	chr2	+	1046	4	NNC	ENSMUSG00000026755.15	novel	752	4	NA	NA	8	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	449.53704580997	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCGGTGTGTTCTCTGTA	NA	False	NA	22	True	AATAAA	-24	NA	38898095	38905605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
ES.18976.7	chr2	+	6128	3	NNC	ENSMUSG00000026755.15	novel	4167	3	NA	NA	13	195	intron_retention	FALSE	non_canonical	0	0	junction_1	460	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATCGCGGTGTGTTCT	NA	False	NA	17	True	AATAAA	-19	NA	38898100	38905600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_38900080_38900293_38903912_38905069
ES.18977.1	chr2	+	135	1	Intergenic	novelGene_15751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	38954314	38954449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38954300_38954400
ES.18978.1	chr2	-	4127	25	NNC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	-1	22404	intron_retention	FALSE	canonical	0	0	junction_1	14.7004818515131	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCAAAAAAAAAGACATGT	NA	False	NA	NA	False	NA	NA	NA	38955554	38883762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38883820_38906509_38907894_38908350_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.11	chr2	-	3558	1	NIC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-16	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	853	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895150	38891592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38891600_38895200
ES.18978.12	chr2	-	334	5	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16312.9057650683	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCTTCATGTTTTAC	NA	False	NA	-11	True	AATAAA	-17	NA	38895137	38891593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891644_38891754_38891778_38894118_38894201_38894743_38894881_38895095
ES.18978.15	chr2	-	436	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16635.847164749	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTCTGCTTCATGTTT	NA	False	NA	-14	True	AATAAA	-14	NA	38895137	38891596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891778_38894118_38894201_38894749_38894881_38895095
ES.18978.16	chr2	-	432	1	Intergenic	novelGene_15750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATATTAAAAAAA	NA	False	NA	NA	False	AATGAA	-31	NA	38898008	38897576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38897600_38898000
ES.18978.17	chr2	-	4702	2	Antisense	novelGene_ENSMUSG00000026755.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	2	junction_1	0	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCAGTTTCCTGTGG	NA	False	NA	NA	False	AATAAA	-24	NA	38904061	38899145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_38900075_38900288
ES.18978.18	chr2	-	200	1	Antisense	novelGene_ENSMUSG00000026755.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTGAGGTTGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	38900284	38900084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_38900100_38900300
ES.18978.19	chr2	-	5674	21	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-5	-9	intron_retention	FALSE	canonical	3	34	junction_8	7.86940277276491	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGATCCATGGGCTA	NA	False	NA	NA	False	AATAAA	-7	NA	38955505	38906175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.2	chr2	-	877	2	FSM	ENSMUSG00000085755.2	ENSMUST00000141133.2	1165	2	267	21	267	-21	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGAAATAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	38888003	38886745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38887374_38887754
ES.18978.20	chr2	-	5613	20	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	24	-9	intron_retention	FALSE	canonical	2	3	junction_13	13.8043310879848	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGATCCATGGGCTA	NA	False	NA	NA	False	AATAAA	-7	NA	38955529	38906175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.21	chr2	-	4695	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	20	-4	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTCAGCTTTGTACTAA	NA	False	NA	NA	False	NA	NA	NA	38955533	38906276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.22	chr2	-	4923	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	0	40	intron_retention	FALSE	canonical	3	23	junction_1	8.93437906357799	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGATGTGTCAAATGTAA	NA	False	NA	NA	False	GATAAA	-17	NA	38955497	38906474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.23	chr2	-	4540	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-24	39	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATGTGTCAAATGTA	NA	False	NA	NA	False	GATAAA	-16	NA	38955577	38906475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.24	chr2	-	5824	20	NNC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-5	0	intron_retention	TRUE	non_canonical	0	0	junction_16	12.2189172621052	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955505	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943066_38946067_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.25	chr2	-	4697	15	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	2815	0	intron_retention	FALSE	canonical	3	7	junction_1	10.6744497540164	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38940205	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38907894_38908350_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170
ES.18978.26	chr2	-	4927	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_21	11.1361396112916	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955553	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.27	chr2	-	4898	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_13	12.4847299019892	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955557	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937597_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.29	chr2	-	4535	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	-14	348	-14	0	multi-exon	FALSE	canonical	3	9	junction_22	11.0304799353113	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955567	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.3	chr2	-	509	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	18823.4659047336	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	False	NA	-9	True	AATAAA	-19	NA	38895181	38891591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891778_38894118_38894201_38894743_38894899_38895095
ES.18978.30	chr2	-	4976	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	7	0	intron_retention	FALSE	canonical	3	9	junction_21	11.2487842628566	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955546	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.31	chr2	-	5441	21	NNC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1	junction_17	11.886547017532	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955569	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943029_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.32	chr2	-	5054	23	NNC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_19	14.8516771460191	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955546	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38952490_38952613_38953253_38953517_38954686_38954736_38955436
ES.18978.33	chr2	-	5395	21	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-21	0	intron_retention	FALSE	canonical	3	9	junction_20	10.6648956863159	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955521	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.34	chr2	-	4823	21	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-13	0	intron_retention	FALSE	canonical	2	3	junction_14	12.3218302211968	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955566	38906514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.35	chr2	-	2936	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.7962208544212	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955561	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38906955_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.36	chr2	-	3698	24	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	1	junction_1	13.6599257969737	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955567	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38906955_38907750_38907894_38908350_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.37	chr2	-	5052	22	NNC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_4	12.5602403316262	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955544	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912588_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.38	chr2	-	4361	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-26	-2	intron_retention	FALSE	canonical	1	1	junction_1	11.7646998799504	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955526	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.39	chr2	-	4383	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	7	-2	intron_retention	FALSE	canonical	2	3	junction_15	13.659613245389	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955546	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.4	chr2	-	592	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	354	0	-148	0	multi-exon	FALSE	canonical	3	27807	junction_3	5721.16085733967	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	False	NA	-9	True	AATAAA	-19	NA	38895282	38891591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ES.18978.40	chr2	-	4325	22	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	21	-2	intron_retention	FALSE	canonical	2	3	junction_15	12.0499715376824	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGTGAGTTTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	38955532	38906516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.41	chr2	-	3723	24	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	1	junction_1	13.4414644984798	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTACAGTGAGTTTTACT	NA	False	NA	NA	False	ATTAAA	-14	NA	38955554	38906517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38906955_38907750_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.42	chr2	-	3094	24	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-26	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	13.4414644984798	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTACAGTGAGTTTTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	38955526	38906518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38906955_38908350_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.43	chr2	-	3345	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-14	4	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCTTCAAGTCTTTCT	NA	False	NA	NA	False	TATAAA	-20	NA	38955567	38907660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.44	chr2	-	4169	21	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	8	0	intron_retention	FALSE	canonical	3	34	junction_8	7.86940277276491	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGCTTCAAGTCT	NA	False	NA	NA	False	TATAAA	-16	NA	38955489	38907664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
ES.18978.45	chr2	-	1334	6	NIC	ENSMUSG00000026754.17	novel	2894	24	NA	NA	-3664	0	intron_retention	FALSE	canonical	3	7	junction_1	11.5169440391104	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGCTTCAAGTCT	NA	False	NA	NA	False	TATAAA	-16	NA	38913237	38907664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38907894_38908350_38908502_38909001_38909666_38910082_38910143_38912712_38912857_38913151
ES.18978.46	chr2	-	4265	21	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	21	-2	intron_retention	FALSE	canonical	0	0	junction_12	13.9807009838563	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATCAGAGCTTCAAGT	NA	False	NA	NA	False	TATAAA	-14	NA	38955532	38907666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937597_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.47	chr2	-	3216	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	37	1616	-16	42	multi-exon	FALSE	canonical	3	9	junction_22	11.0304799353113	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAATGTACTCGTCTTG	NA	False	NA	NA	False	AATACA	-15	NA	38955516	38907782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.48	chr2	-	2436	21	ISM	ENSMUSG00000026754.17	ENSMUST00000184996.8	2894	24	-63	1851	-10	-1350	5prime_fragment	FALSE	canonical	3	9	junction_20	10.6648956863159	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTGTCGAGAATCTGA	NA	False	NA	NA	False	TTTAAA	-5	NA	38955563	38909515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.49	chr2	-	5879	19	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	-17	-1352	intron_retention	FALSE	canonical	3	9	junction_18	10.8883219807074	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCCTGTCGAGAATCT	NA	False	NA	NA	False	TTTAAA	-3	NA	38955517	38909517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.50	chr2	-	2586	13	ISM	ENSMUSG00000026754.17	ENSMUST00000126520.8	2614	18	-63	10884	-10	7743	5prime_fragment	FALSE	canonical	3	9	junction_12	12.8092306126828	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGATTATATATGAGC	NA	False	NA	NA	False	AATAAA	-20	NA	38955563	38923607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ES.18978.6	chr2	-	555	5	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17487.3355228148	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895137	38891592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891778_38893018_38893128_38894118_38894201_38894743_38894881_38895095
ES.18978.7	chr2	-	175	3	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13903.5	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895121	38891592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891691_38894829_38894881_38895095
ES.18978.9	chr2	-	452	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	18825.3514236049	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTTCATGTTTTACA	NA	False	NA	-10	True	AATAAA	-18	NA	38895101	38891592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_38891778_38894118_38894201_38894743_38894881_38895053
ES.18979.1	chr2	-	8145	1	Genic_Genomic	ENSMUSG00000035236.18	novel	NA	NA	NA	NA	25053	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTCTTTAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	38964369	38956224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_38956200_38964400
ES.18979.2	chr2	-	1680	1	ISM	ENSMUSG00000035236.18	ENSMUST00000038874.12	10709	18	122718	123	31394	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTCTAGGAATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	38958028	38956348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38956300_38958000
ES.18979.3	chr2	-	1654	1	ISM	ENSMUSG00000035236.18	ENSMUST00000038874.12	10709	18	118100	4767	26776	3784	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTTTTAAATATCTTG	NA	False	NA	NA	False	NA	NA	NA	38962646	38960992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38961000_38962600
ES.1898.2	chr1	-	1336	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	-48	270	-48	-270	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTCTCTGAATCCTT	7823	False	NA	NA	False	ATTAAA	-13	NA	171188414	171186283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
ES.18980.1	chr2	+	1557	1	Intergenic	novelGene_15753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGAATACTAGATACAG	NA	False	NA	NA	False	NA	NA	NA	38973895	38975452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_38973900_38975500
ES.18981.1	chr2	+	179	1	Intergenic	novelGene_15755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGCATTTTTGAC	4001	False	NA	NA	False	NA	NA	NA	39002322	39002501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_39002300_39002500
ES.18982.1	chr2	-	2446	18	FSM	ENSMUSG00000035236.18	ENSMUST00000038874.12	10709	18	-1	8264	-1	287	multi-exon	FALSE	canonical	2	5	junction_4	3.37403068228235	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTATTTAGAATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	39080747	38964489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38965169_38970088_38970190_38970385_38970560_38973549_38973623_38984714_38984797_38989387_38989488_38992332_38992412_38993214_38993317_38993675_38993778_38996931_38997085_38997219_38997319_38998318_38998416_39011122_39011222_39013015_39013103_39015101_39015198_39022966_39023099_39080000_39080046_39080601
ES.18982.2	chr2	-	657	4	ISM	ENSMUSG00000035236.18	ENSMUST00000204404.3	2128	18	107115	63	15820	-63	3prime_fragment	FALSE	canonical	2	6	junction_3	0.471404520791032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTCAATCTTGAAATT	NA	False	NA	NA	False	AATATA	-17	NA	38973602	38964839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38965169_38970088_38970190_38970385_38970560_38973549
ES.18982.3	chr2	-	1913	18	FSM	ENSMUSG00000035236.18	ENSMUST00000038874.12	10709	18	20	8776	-9	17	multi-exon	FALSE	canonical	2	5	junction_4	3.37403068228235	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTTCCACAGATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	39080726	38965001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_38965169_38970088_38970190_38970385_38970560_38973549_38973623_38984714_38984797_38989387_38989488_38992332_38992412_38993214_38993317_38993675_38993778_38996931_38997085_38997219_38997319_38998318_38998416_39011122_39011222_39013015_39013103_39015101_39015198_39022966_39023099_39080000_39080046_39080601
ES.18982.4	chr2	-	231	1	Intergenic	novelGene_15752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTTTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-31	NA	38966949	38966718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38966700_38966900
ES.18982.5	chr2	-	176	1	Intergenic	novelGene_15754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGCATTAA	NA	False	NA	NA	False	NA	NA	NA	38987822	38987646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_38987600_38987800
ES.18982.6	chr2	-	2229	13	ISM	ENSMUSG00000035236.18	ENSMUST00000147433.8	1896	18	-8	21389	-4	-18	5prime_fragment	FALSE	canonical	0	0	junction_11	4.8904669170404	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	39080750	38991444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_38992412_38993214_38993317_38993675_38993778_38996931_38997085_38997219_38997319_38998318_38998416_39011122_39011222_39013015_39013103_39015101_39015198_39022966_39023099_39040325_39040427_39080000_39080046_39080601
ES.18982.7	chr2	-	2773	1	NIC	ENSMUSG00000035236.18	novel	10709	18	NA	NA	2537	28	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTCTCTTGATAAGACA	9361	False	NA	NA	False	NA	NA	NA	38996238	38993465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_38993500_38996200
ES.18983.1	chr2	+	10754	1	Antisense	novelGene_ENSMUSG00000026753.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	39082256	39093010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_39082300_39093000
ES.18984.1	chr2	+	3606	1	Antisense	novelGene_ENSMUSG00000083157.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTATTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	39106868	39110474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_39106900_39110500
ES.18985.1	chr2	+	1013	1	Antisense	novelGene_ENSMUSG00000026753.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTACAAATACTGGCA	NA	False	NA	NA	False	AATAAA	-17	NA	39115799	39116812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_39115800_39116800
ES.18986.1	chr2	-	4471	6	NIC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	55	553	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	174.765442808354	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTTAGGTAGATGCT	NA	False	NA	NA	False	TATAAA	-27	NA	39116408	39083812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_39087602_39089674_39089885_39090053_39090134_39096663_39096730_39100969_39101066_39116178
ES.18986.10	chr2	-	3396	7	NNC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	-19	-562	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	170.857071521459	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTCTACTTTGAATTG	NA	False	NA	-15	True	AATAAA	-20	NA	39116313	39084927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_39087602_39089674_39089878_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.11	chr2	-	3360	5	FSM	ENSMUSG00000026753.6	ENSMUST00000204257.3	1358	5	-184	-1818	-15	-562	multi-exon	FALSE	canonical	3	12	junction_3	182.956791347028	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTCTACTTTGAATTG	NA	False	NA	-15	True	AATAAA	-20	NA	39116478	39084927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39100969_39101066_39116178
ES.18986.14	chr2	-	3640	8	NNC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	23	-563	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	203.565864585617	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTCTACTTTGAATT	NA	False	NA	-16	True	AATAAA	-19	NA	39116440	39084928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096415_39096527_39096663_39096730_39100969_39101066_39116178
ES.18986.15	chr2	-	1631	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	167	2317	-2	63	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGGTTAAGTGTTAGAA	NA	False	NA	0	True	AATAAA	-16	NA	39116296	39086682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.17	chr2	-	1657	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	15	2443	15	-20	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCTTGTTGTGTTTTT	NA	False	NA	-15	True	AATAAA	-16	NA	39116448	39086808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.18	chr2	-	1429	6	NNC	ENSMUSG00000026753.6	novel	1495	6	NA	NA	-18	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	181.380925127203	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCCTTGTTGTGTTTT	NA	False	NA	-16	True	AATAAA	-15	NA	39116350	39086809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094924_39100969_39101066_39116178
ES.18986.19	chr2	-	1456	5	FSM	ENSMUSG00000026753.6	ENSMUST00000204257.3	1358	5	-163	65	6	-22	multi-exon	FALSE	canonical	3	12	junction_3	182.956791347028	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCTCCTTGTTGTGTTT	NA	False	NA	-17	True	AATAAA	-14	NA	39116457	39086810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39100969_39101066_39116178
ES.18986.2	chr2	-	4288	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	143	-316	12	316	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATGCAAGTTTCCTTC	NA	False	NA	NA	False	AAGAAA	-18	NA	39116320	39084049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.21	chr2	-	5763	1	NIC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	-1577	-28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGCTGCCCTCCTTGTT	NA	False	NA	-23	True	AATAAA	-8	NA	39092579	39086816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_39086800_39092600
ES.18986.22	chr2	-	4710	2	ISM	ENSMUSG00000026753.6	ENSMUST00000204368.2	635	6	23912	-2605	-1130	255	3prime_fragment	FALSE	canonical	3	417	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTCTTGCCTTTTTT	NA	False	NA	3	True	AATATA	-29	NA	39092132	39087253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_39089885_39090053
ES.18986.23	chr2	-	1079	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	145	2891	14	252	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTGCCTCTTGCCTTT	NA	False	NA	0	True	AATATA	-26	NA	39116318	39087256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.3	chr2	-	4141	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	-26	0	-26	0	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTCATGCAGTATAC	NA	False	NA	NA	False	AATAAA	-29	NA	39116489	39084365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.4	chr2	-	5651	6	NIC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	7	-3	intron_retention	FALSE	canonical	3	417	junction_2	27.7964026449467	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCTCATGCAGTA	NA	False	NA	NA	False	AATAAA	-26	NA	39116325	39084368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39096730_39100969_39101066_39116178
ES.18986.5	chr2	-	4069	7	NNC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	-17	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	168.409883584334	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAATAATTTTATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	39116480	39084376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116230
ES.18986.6	chr2	-	4055	7	NIC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	-15	-15	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	166.199344830905	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTGAAAAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	39116059	39084380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39115819
ES.18986.7	chr2	-	5292	6	NNC	ENSMUSG00000026753.6	novel	4115	7	NA	NA	-7926	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	179.927096347382	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTTGTGAAAAATAATT	NA	False	NA	NA	False	AATAAA	-11	NA	39098928	39084383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39097546_39098168
ES.18986.8	chr2	-	3814	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	171	130	2	-130	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCTTTCAATGTCACT	NA	False	NA	NA	False	NA	NA	NA	39116292	39084495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18986.9	chr2	-	3592	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	-26	549	-26	-549	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGCCATCTCCTCCCT	NA	False	NA	-2	True	AATAAA	-33	NA	39116489	39084914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ES.18987.1	chr2	-	470	1	Intergenic	novelGene_15756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCTGATAAGACAGCAAA	NA	False	NA	NA	False	NA	NA	NA	40413076	40412606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_40412600_40413100
ES.18988.1	chr2	+	207	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	1299	-141	1299	141	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTTTGTGGACCA	NA	False	NA	NA	False	AGTAAA	-44	NA	40447062	40447269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_40447100_40447300
ES.18989.1	chr2	+	96	1	Intergenic	novelGene_15757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	40447345	40447441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_40447300_40447400
ES.1899.1	chr1	+	3268	9	NNC	ENSMUSG00000006411.13	novel	3201	10	NA	NA	1534	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.38484800354236	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGATTCCTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	171199456	171215855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171199792_171207685_171208046_171209945_171210237_171211204_171211326_171212251_171212401_171212665_171212820_171213230_171213307_171213727_171213803_171214148
ES.1899.2	chr1	+	2252	5	ISM	ENSMUSG00000006411.13	ENSMUST00000111286.9	3201	10	14494	0	14238	0	3prime_fragment	FALSE	canonical	1	1	junction_3	2.29128784747792	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGATTCCTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	171212160	171215855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171212401_171212665_171212820_171213230_171213307_171213727_171213803_171214148
ES.1899.3	chr1	+	2563	3	NIC	ENSMUSG00000006411.13	novel	3245	8	NA	NA	14243	-18	intron_retention	FALSE	canonical	0	0	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAACAGATAAAACCTT	NA	False	NA	NA	False	CATAAA	-17	NA	171212165	171215835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171212401_171212665_171213307_171214148
ES.18990.1	chr2	+	175	1	Intergenic	novelGene_15758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	40753390	40753565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_40753400_40753600
ES.18991.1	chr2	+	2844	1	Intergenic	novelGene_15759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATGCTATATTTCAT	NA	False	NA	NA	False	NA	NA	NA	40867432	40870276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_40867400_40870300
ES.18992.1	chr2	-	212	1	Intergenic	novelGene_15760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAATTCTGCAGTTCT	NA	False	NA	NA	False	NA	NA	NA	41373583	41373371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_41373400_41373600
ES.18993.1	chr2	+	172	1	Intergenic	novelGene_15761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41391576	41391748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_41391600_41391700
ES.18994.1	chr2	+	173	1	Intergenic	novelGene_15762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	41662855	41663028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_41662900_41663000
ES.18995.1	chr2	-	401	1	Genic_Genomic	ENSMUSG00000081999.4	novel	NA	NA	NA	NA	1300	344	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	41877541	41877140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_41877100_41877500
ES.18996.1	chr2	+	242	2	Intergenic	novelGene_15763	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	84	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	43085845	43086529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_43085874_43086315
ES.18997.1	chr2	+	175	1	Intergenic	novelGene_15764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	44207780	44207955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_44207800_44208000
ES.18998.1	chr2	+	2645	1	Intergenic	novelGene_15765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAGAAATTAAAG	5969	False	NA	NA	False	NA	NA	NA	44249110	44251755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_44249100_44251800
ES.18999.1	chr2	+	184	1	Intergenic	novelGene_15766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGTTATTCC	NA	False	NA	NA	False	NA	NA	NA	44363108	44363292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_44363100_44363300
ES.19.1	chr1	-	3122	1	FSM	ENSMUSG00000103280.2	ENSMUST00000194052.2	1111	1	104	-2115	104	2115	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACTACACCTAATCCAT	NA	False	NA	NA	False	NA	NA	NA	4976980	4973858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4973900_4977000
ES.190.1	chr1	-	130	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	24010790	24010660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_24010700_24010800
ES.1900.1	chr1	+	4599	12	NNC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.0123897167112	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAATGTATATATCTTG	2460	False	NA	NA	False	ATTAAA	-33	NA	171216489	171237866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171216932_171225042_171225146_171228123_171228269_171229492_171229576_171229724_171229833_171230780_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234910_171235204_171235295
ES.1900.10	chr1	+	3794	1	NIC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	17325	-123	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGGGAATGTCACTCAA	1748	False	NA	NA	False	AAGAAA	-2	NA	171233891	171237685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171233900_171237700
ES.1900.11	chr1	+	3131	2	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	18061	3	18016	-3	3prime_fragment	FALSE	canonical	3	23	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGTATGTACTTTGT	2439	False	NA	NA	False	AATAAA	-25	NA	171234582	171237805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171235204_171235295
ES.1900.3	chr1	+	3842	8	NNC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	13136	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.1794271694365	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTGCCAAAATGTATAT	17	True	NA	NA	False	ATTAAA	-27	NA	171229702	171237860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171229833_171230780_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234910_171235204_171235295
ES.1900.4	chr1	+	145	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	450	False	NA	NA	False	NA	NA	NA	171230326	171230471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171230300_171230500
ES.1900.5	chr1	+	1372	5	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14220	4583	14175	-4583	internal_fragment	FALSE	canonical	3	17	junction_3	4.43705983732471	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTTA	865	False	NA	NA	False	NA	NA	NA	171230741	171233225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377
ES.1900.6	chr1	+	3699	7	NNC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	14175	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.51606828241346	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	865	False	NA	NA	False	AATAAA	-28	NA	171230741	171237808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234910_171235204_171235295
ES.1900.8	chr1	+	3541	7	NNC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	14210	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.51606828241346	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGGGAATGTCACTCAA	900	False	NA	NA	False	AAGAAA	-2	NA	171230776	171237685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234910_171235204_171235295
ES.1900.9	chr1	+	3985	7	NNC	ENSMUSG00000048865.17	novel	4494	12	NA	NA	14220	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.51606828241346	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAACCTCAGAGTTA	910	False	NA	NA	False	NA	NA	NA	171230786	171238139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234910_171235204_171235295
ES.19000.1	chr2	+	2098	1	Intergenic	novelGene_15769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGGGGGAATCACCAT	NA	False	NA	NA	False	NA	NA	NA	44704273	44706371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_44704300_44706400
ES.19001.1	chr2	-	2368	12	NNC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.8602555891438	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	False	NA	-3	True	AATAAA	-28	NA	44817648	44454423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_44455128_44455218_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817616
ES.19001.10	chr2	-	5363	5	NIC	ENSMUSG00000036890.14	novel	2422	5	NA	NA	-40	315	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.0069431053691	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAGGAAACATTTTTAT	NA	False	NA	NA	False	AATAAA	-28	NA	44817316	44675186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_44676933_44678388_44681614_44715362_44715556_44750302_44750339_44817153
ES.19001.11	chr2	-	213	1	Intergenic	novelGene_15770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGCCTCTATATTTT	NA	False	NA	NA	False	NA	NA	NA	44718512	44718299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_44718300_44718500
ES.19001.12	chr2	-	5059	1	Intergenic	novelGene_15771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44812962	44807903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_44807900_44813000
ES.19001.2	chr2	-	2540	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_10	9.30644937664198	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	False	NA	-3	True	AATAAA	-28	NA	44817266	44454423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
ES.19001.3	chr2	-	2244	10	NNC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	24.1200700201674	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCATTTGCGTCTAAGT	NA	False	NA	-6	True	AATAAA	-25	NA	44817285	44454426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44642058_44642233_44646279_44646448_44715362_44715557_44750302_44750341_44817153
ES.19001.4	chr2	-	2502	10	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.0619785227596	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCATATTCATTTGCG	NA	False	NA	-13	True	AATAAA	-18	NA	44817274	44454433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44817153
ES.19001.5	chr2	-	2439	11	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	16.2061716639063	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCATATTCATTTGCG	NA	False	NA	-13	True	AATAAA	-18	NA	44817638	44454433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817616
ES.19001.6	chr2	-	2301	9	NNC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-21545	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	16.2326830807479	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCATATTCATTTGCG	NA	False	NA	-13	True	AATAAA	-18	NA	44667994	44454433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44667881
ES.19001.7	chr2	-	4497	8	NIC	ENSMUSG00000036890.14	novel	2564	11	NA	NA	-1	-1813	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	10.4725101760636	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGATGCAATTCAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	44817249	44462194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362_44715556_44750302_44750339_44817153
ES.19001.8	chr2	-	165	1	Intergenic	novelGene_15767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGTCCTGTACAGAGG	NA	False	NA	NA	False	NA	NA	NA	44493966	44493801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_44493800_44494000
ES.19001.9	chr2	-	2315	1	Intergenic	novelGene_15768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-26	NA	44588581	44586266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_44586300_44588600
ES.19002.1	chr2	+	222	1	Intergenic	novelGene_15772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACTATAT	NA	False	NA	NA	False	AATAAA	-27	NA	45026129	45026351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_45026100_45026400
ES.19003.1	chr2	+	843	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	-1	12	intron_retention	FALSE	canonical	3	17	junction_1	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATCTTCCTGTTGT	NA	False	NA	NA	False	ATTAAA	-29	NA	45586615	45588471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_45586642_45586810_45587155_45587998
ES.19003.2	chr2	+	3027	2	NNC	ENSMUSG00000086202.2	novel	424	2	NA	NA	-1	1221	intron_retention	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCCACATAAA	NA	False	NA	NA	False	NA	NA	NA	45586615	45589680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_45587278_45587315
ES.19003.3	chr2	+	2731	4	Fusion	ENSMUSG00000086710.2_ENSMUSG00000086202.2	novel	635	4	NA	NA	-1	1855	intron_retention	FALSE	canonical	0	0	junction_3	8.80656320908194	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCCTAAAGCCTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	45586615	45645178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_45586642_45586810_45587155_45624962_45625071_45642925
ES.19003.4	chr2	+	1011	2	FSM	ENSMUSG00000086202.2	ENSMUST00000134308.2	424	2	-195	-392	0	12	multi-exon	FALSE	canonical	3	37	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATCTTCCTGTTGT	NA	False	NA	NA	False	ATTAAA	-29	NA	45586616	45588471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_45587155_45587998
ES.19003.5	chr2	+	2819	2	NNC	ENSMUSG00000086202.2	novel	424	2	NA	NA	22	1231	intron_retention	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACATAAACAAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	45586833	45589690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_45587266_45587303
ES.19003.6	chr2	+	3862	2	Intergenic	novelGene_15773	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCTCATGCAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	45589640	45595587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_45590017_45592101
ES.19003.7	chr2	+	4922	1	Intergenic	novelGene_15774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTCTGACTGTTCATCT	NA	False	NA	NA	False	NA	NA	NA	45596119	45601041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_45596100_45601000
ES.19003.8	chr2	+	1789	1	Intergenic	novelGene_15775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGTGAAAAACAG	NA	False	NA	NA	False	AATAGA	-41	NA	45599860	45601649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_45599900_45601600
ES.19004.1	chr2	+	2349	2	Intergenic	novelGene_15776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATCTTGAATTTG	NA	False	NA	NA	False	AATAAA	-10	NA	45649798	45663121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_45651718_45662691
ES.19005.1	chr2	+	184	1	Intergenic	novelGene_15777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAATAG	NA	False	NA	NA	False	NA	NA	NA	46225338	46225522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_46225300_46225500
ES.19006.1	chr2	-	4481	2	Intergenic	novelGene_15778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGTGTGATTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	47550891	47546144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_47547514_47547779
ES.19007.1	chr2	+	145	1	Intergenic	novelGene_15779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47799562	47799707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_47799600_47799700
ES.19008.1	chr2	+	2865	10	NIC	ENSMUSG00000052155.6	novel	5686	11	NA	NA	-119	212	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	19.2321746874834	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCACTGTGTTATTTAA	NA	False	NA	NA	False	AATAAA	-30	NA	48704001	48790472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48789605
ES.19008.10	chr2	+	5729	12	NNC	ENSMUSG00000052155.6	novel	5686	11	NA	NA	64	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.9393172227386	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACATGCAGTTTTTCTTT	NA	False	NA	17	True	AATAAA	-20	NA	48704184	48793283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48704839_48715094_48715204_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784789_48786983_48787123_48788489_48788621_48789605
ES.19008.11	chr2	+	2118	9	NNC	ENSMUSG00000052155.6	novel	5686	11	NA	NA	74	-4579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.612117188683	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTTGAAGTGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	48704194	48785681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48785229
ES.19008.12	chr2	+	1899	1	ISM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	86948	314	10668	-314	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCAACCAGCAGTACGT	NA	False	NA	NA	False	ATTAAA	-16	NA	48791068	48792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_48791100_48793000
ES.19008.2	chr2	+	5810	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	-119	-5	-119	5	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGTTTTTCTTTAGC	NA	False	NA	20	True	AATAAA	-23	NA	48704001	48793286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ES.19008.3	chr2	+	2848	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	24	2814	24	207	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAAATTCACTGTGTTA	NA	False	NA	NA	False	AATAAA	-25	NA	48704144	48790467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ES.19008.4	chr2	+	2670	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	29	2987	29	34	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGCTGTTCTGTGT	NA	False	NA	NA	False	TATAAA	-42	NA	48704149	48790294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ES.19008.5	chr2	+	4885	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	32	769	32	-769	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACAGAGACTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	48704152	48792512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ES.19008.6	chr2	+	4853	10	NIC	ENSMUSG00000052155.6	novel	5686	11	NA	NA	32	29	intron_retention	FALSE	canonical	3	42	junction_8	9.23760430703401	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGTGCTGCTGTTC	NA	False	NA	NA	False	TATAAA	-37	NA	48704152	48790289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48787123_48788489_48788621_48789605
ES.19008.8	chr2	+	5627	11	NNC	ENSMUSG00000052155.6	novel	5686	11	NA	NA	45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	18.5267374353932	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTGCACATGCAGTT	NA	False	NA	10	True	AATAAA	-13	NA	48704165	48793276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788498_48788621_48789605
ES.19008.9	chr2	+	3100	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	54	2532	54	489	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCTGTGACACTGGA	NA	False	NA	NA	False	CATAAA	-20	NA	48704174	48790749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ES.19009.1	chr2	+	175	1	Intergenic	novelGene_15781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48812009	48812184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_48812000_48812200
ES.1901.1	chr1	+	1817	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	-34	384	-34	1	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6703	False	NA	64	True	GATAAA	-16	NA	171238846	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.10	chr1	+	3380	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-14	1207	intron_retention	FALSE	canonical	3	27	junction_9	54.1255969658865	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAGTTGTATTTAAT	6784	False	NA	NA	False	AATAAA	-15	NA	171238927	171247917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599_171247669_171247758
ES.1901.11	chr1	+	3299	11	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-12	1207	intron_retention	FALSE	canonical	3	21	junction_1	69.6218356552023	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAGTTGTATTTAAT	6786	False	NA	NA	False	AATAAA	-15	NA	171238929	171247917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
ES.1901.12	chr1	+	1798	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	55.998015837865	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6786	False	NA	64	True	GATAAA	-16	NA	171238929	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.14	chr1	+	3364	10	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	1	1205	intron_retention	FALSE	canonical	3	21	junction_1	55.998015837865	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGAGTTGTATTTA	6809	False	NA	NA	False	AATAAA	-13	NA	171238952	171247915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.15	chr1	+	1951	10	FSM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	-114	-15	-114	1	multi-exon	FALSE	canonical	3	12	junction_1	58.785863758031	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6991	False	NA	64	True	GATAAA	-16	NA	171239134	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.16	chr1	+	1718	10	NNC	ENSMUSG00000026641.14	novel	696	3	NA	NA	-97	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.1982096522932	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCTGTCTTCCTCC	7008	False	NA	62	True	GATAAA	-14	NA	171239151	171246324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171239217_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.17	chr1	+	1888	10	NIC	ENSMUSG00000026641.14	novel	1822	10	NA	NA	-82	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	71.9574634295142	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	7023	False	NA	64	True	GATAAA	-16	NA	171239166	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.18	chr1	+	1990	9	NIC	ENSMUSG00000026641.14	novel	1822	10	NA	NA	-41	1	intron_retention	FALSE	canonical	3	12	junction_1	75.6917061176454	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	7064	False	NA	64	True	GATAAA	-16	NA	171239207	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
ES.1901.19	chr1	+	3225	11	Fusion	ENSMUSG00000103711.2_ENSMUSG00000026641.14	novel	1822	10	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_5	87.3006300091815	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTGTATTTAATTTGT	7105	False	NA	NA	False	AATAAA	-19	NA	171239248	171247921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244463_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
ES.1901.2	chr1	+	1785	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	-33	-637	-33	1	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6704	False	NA	64	True	GATAAA	-16	NA	171238847	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.20	chr1	+	3030	8	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	1522	-1	intron_retention	FALSE	canonical	3	187	junction_2	10.1277553570092	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCTGTCTTCCTCC	8627	False	NA	62	True	GATAAA	-14	NA	171240770	171246324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
ES.1901.21	chr1	+	2559	9	ISM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	1852	-15	1852	1	3prime_fragment	FALSE	canonical	3	186	junction_6	10.2713192920871	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	8957	False	NA	64	True	GATAAA	-16	NA	171241100	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.22	chr1	+	3002	5	NIC	ENSMUSG00000026641.14	novel	1878	9	NA	NA	1956	0	intron_retention	FALSE	canonical	3	42	junction_2	68.2495421230062	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTCTTCCTCCT	9061	False	NA	63	True	GATAAA	-15	NA	171241204	171246325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171242098_171243072_171243368_171243702_171243805_171244377_171244574_171244809
ES.1901.23	chr1	+	1314	3	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-197	-1	intron_retention	FALSE	canonical	3	186	junction_1	5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCTGTCTTCCTCC	NA	False	NA	62	True	GATAAA	-14	NA	171244700	171246324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171244898_171245040_171245433_171245599
ES.1901.3	chr1	+	3284	11	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	0	1207	intron_retention	FALSE	canonical	3	27	junction_10	51.4105047631318	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAGTTGTATTTAAT	6737	False	NA	NA	False	AATAAA	-15	NA	171238880	171247917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599_171247669_171247758
ES.1901.4	chr1	+	1893	9	NIC	ENSMUSG00000026641.14	novel	1115	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	42	junction_4	52.4183889489175	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCTGTCTTCCTCC	6737	False	NA	62	True	GATAAA	-14	NA	171238880	171246324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
ES.1901.5	chr1	+	1814	10	NIC	ENSMUSG00000026641.14	novel	1115	10	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	69.9292411329631	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6739	False	NA	64	True	GATAAA	-16	NA	171238882	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171241940_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.6	chr1	+	1967	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	10	190	-3	-190	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCGAGTGTTACAGGTAT	6747	False	NA	NA	False	TATAAA	-12	NA	171238890	171246520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.7	chr1	+	1913	9	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	9	1	intron_retention	FALSE	canonical	3	185	junction_1	10.5208127062504	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTCCTCCTT	6767	False	NA	64	True	GATAAA	-16	NA	171238910	171246326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171242004_171242098_171243072_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ES.1901.8	chr1	+	3354	10	Fusion	ENSMUSG00000103711.2_ENSMUSG00000026641.14	novel	1115	10	NA	NA	19	-4	intron_retention	FALSE	canonical	3	27	junction_9	68.5696906011381	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATGAGTTGTATTTA	6777	False	NA	NA	False	AATAAA	-13	NA	171238920	171247915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599_171247669_171247758
ES.1901.9	chr1	+	3473	9	NIC	ENSMUSG00000026641.14	novel	2167	10	NA	NA	-17	1207	intron_retention	FALSE	canonical	3	185	junction_1	10.4035751066641	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGAGTTGTATTTAAT	6781	False	NA	NA	False	AATAAA	-15	NA	171238924	171247917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171245100_171245208_171245433_171245599
ES.19010.1	chr2	+	6899	12	NNC	ENSMUSG00000036792.13	novel	6037	11	NA	NA	-195	-1	intron_retention	FALSE	canonical	0	0	junction_2	4.62833529503922	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTTCTTTCATTAAT	6016	False	NA	NA	False	CATAAA	-16	NA	48839324	49150569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48963853_48963896_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.10	chr2	+	4677	13	NNC	ENSMUSG00000036792.13	novel	5978	15	NA	NA	-19	-1602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.18009008930668	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTCTAGAATTTTTT	6827	False	NA	NA	False	AATAAA	-15	NA	48840135	49148968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48963853_48963896_48976601_48976665_48989728_48989822_49008663_49008818_49025277_49025468_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.11	chr2	+	10783	1	Genic_Genomic	ENSMUSG00000036792.13	novel	NA	NA	NA	NA	2825	9689	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGAAAGAGCCTAAGAG	9677	False	NA	NA	False	NA	NA	NA	48842985	48853768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_48843000_48853800
ES.19010.12	chr2	+	3297	1	Genic_Genomic	ENSMUSG00000036792.13	novel	NA	NA	NA	NA	3656	3034	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTCTAAGGGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	48843816	48847113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_48843800_48847100
ES.19010.13	chr2	+	2473	1	Genic_Genomic	ENSMUSG00000036792.13	novel	NA	NA	NA	NA	3746	2300	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCAGTCTTATATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	48843906	48846379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_48843900_48846400
ES.19010.14	chr2	+	165	1	Intergenic	novelGene_15782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTATGAGT	1423	False	NA	NA	False	NA	NA	NA	48975842	48976007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_48975800_48976000
ES.19010.15	chr2	+	3362	1	Intergenic	novelGene_15783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCAGGCGGTGGTGGTCC	NA	False	NA	NA	False	NA	NA	NA	49035137	49038499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_49035100_49038500
ES.19010.16	chr2	+	167	1	Intergenic	novelGene_15784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAGAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	49041631	49041798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_49041600_49041800
ES.19010.17	chr2	+	4227	9	NIC	ENSMUSG00000036792.13	novel	5978	15	NA	NA	-275	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.03112887414927	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGATGCTGGTTTTGT	3204	False	NA	NA	False	AATAAA	-31	NA	49135705	49207004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_49136219_49140150_49140254_49141254_49141436_49146188_49148325_49162052_49162380_49164574_49164787_49188667_49188742_49203661_49203738_49206399
ES.19010.18	chr2	+	7924	4	ISM	ENSMUSG00000036792.13	ENSMUST00000047413.10	8543	10	75	56037	75	3095	5prime_fragment	FALSE	canonical	2	8	junction_3	0.816496580927726	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGGAAGACTTTATTCC	3554	False	NA	NA	False	AATAAA	-15	NA	49136055	49153665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.19	chr2	+	2762	1	Intergenic	novelGene_15785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAGAGCATGTTTTATC	NA	False	NA	NA	False	AATAAA	-16	NA	49152948	49155710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_49152900_49155700
ES.19010.2	chr2	+	5551	14	NNC	ENSMUSG00000036792.13	novel	6037	11	NA	NA	-164	-1600	intron_retention	FALSE	canonical	0	0	junction_2	5.22737446400985	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATTTTTTAT	6047	False	NA	NA	False	AATAAA	-17	NA	48839355	49148970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48954716_48954770_48955330_48955412_48976601_48976665_48989728_48989822_49008663_49008818_49025277_49025468_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.20	chr2	+	3215	1	Intergenic	novelGene_15786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCAAAGTAATTCATTGT	NA	False	NA	NA	False	AATAAA	-30	NA	49164846	49168061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_49164800_49168100
ES.19010.21	chr2	+	1276	1	FSM	ENSMUSG00000081272.2	ENSMUST00000119733.2	1308	1	493	-461	493	461	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATAGTATG	NA	False	NA	NA	False	AATAAA	-12	NA	49198659	49199935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49198700_49199900
ES.19010.3	chr2	+	5039	11	NIC	ENSMUSG00000036792.13	novel	6037	11	NA	NA	12	-1597	intron_retention	FALSE	canonical	0	0	junction_3	3.49857113690718	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGAATTTTTTATCAT	6238	False	NA	NA	False	AATAAA	-20	NA	48839546	49148973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.4	chr2	+	5319	14	NNC	ENSMUSG00000036792.13	novel	6037	11	NA	NA	15	-1600	intron_retention	FALSE	canonical	0	0	junction_2	5.06174888503449	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATTTTTTAT	6241	False	NA	NA	False	AATAAA	-17	NA	48839549	49148970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48963853_48963896_48976601_48976665_48989728_48989822_49008663_49008818_49025277_49025468_49059920_49060026_49104165_49104220_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.5	chr2	+	7560	17	NIC	ENSMUSG00000036792.13	novel	5978	15	NA	NA	30	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	4.58087055045217	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATGCTGGTTTTGTA	6256	False	NA	NA	False	AATAAA	-32	NA	48839564	49207005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188_49148325_49162052_49163070_49164574_49164787_49168592_49169796_49188667_49188742_49203661_49203738_49206399
ES.19010.6	chr2	+	5081	11	NNC	ENSMUSG00000036792.13	novel	5978	15	NA	NA	37	-1597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.49857113690718	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGAATTTTTTATCAT	6263	False	NA	NA	False	AATAAA	-20	NA	48839571	49148973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48976601_48976729_48989725_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.7	chr2	+	4439	11	NIC	ENSMUSG00000036792.13	novel	713	8	NA	NA	71	-2138	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.49857113690718	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATTTTCTTCATTTCT	6297	False	NA	NA	False	AATAGA	-18	NA	48839605	49148432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.8	chr2	+	4907	10	NNC	ENSMUSG00000036792.13	novel	5978	15	NA	NA	71	-1608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.44722135470878	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACCTGATTTCTAGAA	6297	False	NA	NA	False	AATAAA	-9	NA	48839605	49148962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_48840188_48908265_48908338_48989728_48989822_49008663_49008819_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19010.9	chr2	+	8900	11	NIC	ENSMUSG00000036792.13	novel	713	8	NA	NA	77	2329	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.49857113690718	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATATATGTGTGTGTTA	6303	False	NA	NA	False	AATAAA	-34	NA	48839611	49152899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_48840188_48908265_48908338_48976601_48976665_48989728_48989822_49008663_49008818_49059920_49060026_49121683_49121861_49135553_49136219_49140150_49140254_49141254_49141436_49146188
ES.19011.1	chr2	-	177	1	Intergenic	novelGene_15780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTAACATTTTC	NA	False	NA	NA	False	NA	NA	NA	48729599	48729422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_48729400_48729600
ES.19012.1	chr2	-	7418	1	Antisense	novelGene_ENSMUSG00000052155.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTATAGAGCTGTCCA	NA	False	NA	NA	False	TATAAA	-41	NA	48790811	48783393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_48783400_48790800
ES.19012.10	chr2	-	4061	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	6	-1	6	1	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAAGCATTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	48839282	48792834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.11	chr2	-	3962	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	166.322457182768	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839231	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819690_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.12	chr2	-	4003	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	161.5542849393	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839251	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.13	chr2	-	4481	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	165.288368913119	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839246	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48811725_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.15	chr2	-	4069	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	187.951252907204	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839250	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.16	chr2	-	3838	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	172.599468101408	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839261	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.17	chr2	-	3948	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	129.063587902329	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839261	48792835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
ES.19012.18	chr2	-	3842	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	129.679171419315	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTGATGAAGCATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	48839241	48792838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.19	chr2	-	2988	16	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	202.564777019325	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCTGATGAAGCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	48839242	48792839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48793957_48795389_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48811725_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.2	chr2	-	8147	13	NIC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	7	4231	intron_retention	FALSE	canonical	3	21	junction_10	161.199582988157	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTCTTAAAACAGGCCT	NA	False	NA	NA	False	TATAAA	-22	NA	48839281	48788604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
ES.19012.21	chr2	-	3663	13	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	191.507107497926	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAATATCTGATGAAGC	NA	False	NA	NA	False	AGTAAA	-11	NA	48839234	48792842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.23	chr2	-	4023	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	15	-28	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	130.507974319375	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48840274	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48840129
ES.19012.24	chr2	-	4083	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.921770495089	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839250	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48806207_48806302_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823167_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.25	chr2	-	3925	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.827141557027	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839243	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.26	chr2	-	3928	13	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	18	-28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	190.278505675818	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839225	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819596_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
ES.19012.27	chr2	-	3769	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	-28	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	167.697810228862	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839242	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.28	chr2	-	4088	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	127.896315254277	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839242	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819596_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.29	chr2	-	3686	12	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	-28	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	198.706644525321	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAAAAGAGAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	48839250	48792863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
ES.19012.3	chr2	-	6286	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	7	2392	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	161.457122378865	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCAAATTCTGTTAGT	NA	False	NA	NA	False	TATAAA	-12	NA	48839281	48790443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.30	chr2	-	3477	9	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	6971	-29	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	228.043855431362	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAGTAAAAAAGAGAA	NA	False	NA	NA	False	AAAAAG	-9	NA	48817243	48792864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48811725_48811816_48812163_48812183_48817107
ES.19012.31	chr2	-	3935	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-8	-29	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	129.507030720024	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAGTAAAAAAGAGAA	NA	False	NA	NA	False	AAAAAG	-9	NA	48839261	48792864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839203
ES.19012.32	chr2	-	3153	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	38	875	3	-875	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGGTAACGTCTTATAA	NA	False	NA	NA	False	ATTAAA	-23	NA	48839250	48793710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.33	chr2	-	2589	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	2	574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	167.696579741934	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACCTCATAGTTAAAACT	NA	False	NA	NA	False	TATAAA	-19	NA	48839251	48794317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48836056_48836099_48839128
ES.19012.34	chr2	-	2619	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	11	569	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	127.896315254277	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTACCTCATAGTTA	NA	False	NA	NA	False	TATAAA	-14	NA	48839232	48794322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819596_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.35	chr2	-	2582	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	569	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	187.951252907204	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTACCTCATAGTTA	NA	False	NA	NA	False	TATAAA	-14	NA	48839250	48794322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.36	chr2	-	2517	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	62	1487	17	569	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTACCTCATAGTTA	NA	False	NA	NA	False	TATAAA	-14	NA	48839226	48794322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.37	chr2	-	5637	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-5	478	intron_retention	FALSE	canonical	3	8	junction_10	213.233488716147	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAGCAACAAATGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	48839258	48794413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823167_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.38	chr2	-	2415	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	63	1588	18	468	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAAGCTTAGCAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	48839225	48794423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.39	chr2	-	2152	14	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	21	376	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	157.132288893842	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACTAACACCAGTGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	48839222	48794515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.4	chr2	-	5566	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	-15	-1485	-15	1485	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTTGGTAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	48839303	48791350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.40	chr2	-	1565	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	143	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	124.654314906673	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTATGTGGTCCATTA	NA	False	NA	-6	True	CATAAA	-19	NA	48839252	48795184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.41	chr2	-	1606	14	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	3	143	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	159.874469987694	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTATGTGGTCCATTA	NA	False	NA	-6	True	CATAAA	-19	NA	48839240	48795184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823167_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.42	chr2	-	4829	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	142	intron_retention	FALSE	canonical	3	352	junction_6	46.5259784063341	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTATGTGGTCCATT	NA	False	NA	-7	True	CATAAA	-18	NA	48839252	48795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.43	chr2	-	1742	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	-26	2350	-26	142	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTATGTGGTCCATT	NA	False	NA	-7	True	CATAAA	-18	NA	48839314	48795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.44	chr2	-	1494	14	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	0	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	191.71085846774	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTATGTGGTCCAT	NA	False	NA	-8	True	CATAAA	-17	NA	48839243	48795186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826794_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.45	chr2	-	4870	13	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	3	141	intron_retention	FALSE	canonical	3	14	junction_7	165.076497418621	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTATGTGGTCCAT	NA	False	NA	-8	True	CATAAA	-17	NA	48839250	48795186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819596_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.46	chr2	-	4648	13	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	126	intron_retention	FALSE	canonical	3	27	junction_7	167.062592228848	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATACTCTTTTAAA	NA	False	NA	-23	True	AATAAA	-31	NA	48839252	48795201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.47	chr2	-	1677	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	7	122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	131.223554675886	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTGATACTCTTT	NA	False	NA	-27	True	AATAAA	-27	NA	48839281	48795205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826795_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.48	chr2	-	1669	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	2	122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	129.582488407096	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTGATACTCTTT	NA	False	NA	-27	True	AATAAA	-27	NA	48839241	48795205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807371_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.49	chr2	-	7071	12	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-1	122	intron_retention	FALSE	canonical	3	352	junction_5	48.5580508002603	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTGATACTCTTT	NA	False	NA	-27	True	AATAAA	-27	NA	48839247	48795205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.5	chr2	-	4425	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	6	-365	6	365	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCACATGCTAAAACTCC	NA	False	NA	NA	False	AATAAA	-19	NA	48839282	48792470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.50	chr2	-	1750	16	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	10	122	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	188.634202153857	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTGATACTCTTT	NA	False	NA	-27	True	AATAAA	-27	NA	48839233	48795205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48811725_48811816_48812163_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.51	chr2	-	1569	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-111	122	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	130.507974319375	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTGATACTCTTT	NA	False	NA	-27	True	AATAAA	-27	NA	48840162	48795205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48840129
ES.19012.52	chr2	-	2714	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-2	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.209589568246	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGATTTGATACTCTT	NA	False	NA	-28	True	AATAAA	-26	NA	48839248	48795206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48806207_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.53	chr2	-	1846	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	22	120	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	166.832021714621	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGATTTGATACTCT	NA	False	NA	-29	True	AATAAA	-25	NA	48839221	48795207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48811963_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.54	chr2	-	4730	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	19	120	intron_retention	FALSE	canonical	3	42	junction_4	125.442190093906	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGATTTGATACTCT	NA	False	NA	-29	True	AATAAA	-25	NA	48839224	48795207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.55	chr2	-	1619	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	166.298797171923	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGATTTGATACTCT	NA	False	NA	-29	True	AATAAA	-25	NA	48839242	48795207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807371_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.56	chr2	-	6488	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	3	120	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	128.548381516581	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGATTTGATACTCT	NA	False	NA	-29	True	AATAAA	-25	NA	48839250	48795207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.59	chr2	-	1647	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-6	116	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCATAAAATGATTTGATA	NA	False	NA	-33	True	AATAAA	-21	NA	48839294	48795211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.6	chr2	-	4229	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.486269447629	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	48839253	48792619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795591_48799274_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.60	chr2	-	1657	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	9	114	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	125.016069972941	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCCATAAAATGATTTGA	NA	False	NA	-35	True	AATAAA	-19	NA	48839234	48795213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.61	chr2	-	2242	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	191.71085846774	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTCCATAAAATGATTT	NA	False	NA	-37	True	AATAAA	-17	NA	48839242	48795215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826016_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.62	chr2	-	4646	12	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	110	intron_retention	FALSE	canonical	0	0	junction_6	140.617058086113	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839253	48795217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.63	chr2	-	1985	6	ISM	ENSMUSG00000026761.13	ENSMUST00000154784.8	1477	14	30783	-109	-5873	109	3prime_fragment	FALSE	canonical	3	68	junction_4	163.569434797581	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48808460	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176
ES.19012.64	chr2	-	1486	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	109	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	170.724009735011	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839242	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.66	chr2	-	1592	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	240	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.259353005716	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839003	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48838934
ES.19012.67	chr2	-	1533	13	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-5	109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	197.509212162089	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839258	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807371_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
ES.19012.68	chr2	-	1569	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	1	109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.827141557027	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839242	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.69	chr2	-	6403	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	18	109	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	165.553616692599	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839225	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.7	chr2	-	4199	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	37	-170	2	170	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTTCATAATTGTGTG	NA	False	NA	NA	False	AAAAAG	-11	NA	48839251	48792665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.70	chr2	-	4897	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	7	109	intron_retention	FALSE	canonical	1	1	junction_13	172.239340838684	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839281	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48830692_48830765_48839128
ES.19012.71	chr2	-	1629	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-24	109	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	131.259353005716	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48840075	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839969
ES.19012.72	chr2	-	2040	15	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	3	109	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	185.738748388863	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATGGTCCATAAAATGA	NA	False	NA	-40	True	AATAAA	-14	NA	48839240	48795218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48811725_48812183_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.74	chr2	-	7105	13	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	108	intron_retention	TRUE	canonical	0	0	junction_1	207.636484564303	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGCATGGTCCATAAAATG	NA	False	NA	-41	True	AATAAA	-13	NA	48839244	48795219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48796623_48797263_48799527_48800197_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.75	chr2	-	1563	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	18	2485	-17	7	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGTATGTTTTGAATA	NA	False	NA	NA	False	TATAAA	-19	NA	48839270	48795320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.76	chr2	-	1587	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	187.951252907204	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGTATGTTTTGAATA	NA	False	NA	NA	False	TATAAA	-19	NA	48839253	48795320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.77	chr2	-	1553	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	125.016069972941	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTTGCACTTAGTATG	NA	False	NA	NA	False	TATAAA	-10	NA	48839246	48795329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.78	chr2	-	4515	13	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	3	-2	intron_retention	FALSE	canonical	3	27	junction_7	162.599947895304	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTTGCACTTAGTATG	NA	False	NA	NA	False	TATAAA	-10	NA	48839250	48795329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.79	chr2	-	1490	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAAATTTGCACTTAGT	NA	False	NA	NA	False	TATAAA	-7	NA	48839258	48795332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.8	chr2	-	3894	14	NNC	ENSMUSG00000026761.13	novel	1477	14	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	157.132288893842	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGAAGCATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	48839282	48792833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817144_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.80	chr2	-	1573	15	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	18	-28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	164.079015932531	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTTTGTTTATAAATAG	NA	False	NA	NA	False	NA	NA	NA	48839225	48795355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48811725_48811816_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.81	chr2	-	1280	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	129.679171419315	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTACTGTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	48839235	48795394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.82	chr2	-	1392	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	129.507030720024	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTACTGTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	48839248	48795394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839203
ES.19012.83	chr2	-	2408	9	NIC	ENSMUSG00000026761.13	novel	2133	10	NA	NA	11	440	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	201.60031621999	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAGAAAACAAAAG	NA	False	NA	NA	False	AATAAA	-4	NA	48839232	48800975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.84	chr2	-	2181	10	FSM	ENSMUSG00000026761.13	ENSMUST00000141441.8	2133	10	-48	0	-6	0	multi-exon	FALSE	canonical	3	352	junction_2	49.1515670473473	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTACTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	48839294	48801415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.85	chr2	-	2137	10	NIC	ENSMUSG00000026761.13	novel	2133	10	NA	NA	9	-7	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	147.638781749726	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACATTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	48839234	48801422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
ES.19012.86	chr2	-	4769	5	NIC	ENSMUSG00000026761.13	novel	1153	7	NA	NA	18	6	intron_retention	FALSE	canonical	3	457	junction_4	29.4225678688995	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGACTTTGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48839225	48821963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_48823178_48823561_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.87	chr2	-	1141	7	NNC	ENSMUSG00000026761.13	novel	1153	7	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	225.938044605153	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTTTGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48839233	48821964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48822610_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839132
ES.19012.88	chr2	-	1656	6	ISM	ENSMUSG00000026761.13	ENSMUST00000141441.8	2133	10	-16	20549	-9	5	5prime_fragment	FALSE	canonical	3	457	junction_5	29.4862679903714	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGACTTTGGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48839262	48821964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.89	chr2	-	1143	7	NNC	ENSMUSG00000026761.13	novel	1153	7	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.963262857754	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGGACAGACTTTGGG	NA	False	NA	NA	False	NA	NA	NA	48839245	48821971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_48822603_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ES.19012.9	chr2	-	5456	4	FSM	ENSMUSG00000026761.13	ENSMUST00000150492.8	868	4	-2032	-2556	-125	1	multi-exon	FALSE	canonical	3	420	junction_2	35.1852241715184	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAAGCATTTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	48802712	48792834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197
ES.19013.1	chr2	+	4691	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	9	-3	9	3	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATATATGTGTGTGTGT	NA	False	NA	17	True	AGTAAA	-22	NA	49341506	49441963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.2	chr2	+	3134	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	19	1544	19	-1544	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTAAAGATTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	49341516	49440416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.3	chr2	+	4094	15	NNC	ENSMUSG00000069495.13	novel	4697	14	NA	NA	39	-392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.08238932871562	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTTATACCTTTTTT	NA	False	NA	4	True	ATTAAA	-18	NA	49341536	49441568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49341627_49341801_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420019_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.4	chr2	+	3895	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	41	761	41	-761	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGCATATGTGTTTA	NA	False	NA	16	True	AATAAA	-21	NA	49341538	49441199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.6	chr2	+	4226	13	ISM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	37202	-1	37202	1	3prime_fragment	FALSE	canonical	2	9	junction_1	6.11634876558084	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGATATATGTGTGTGT	NA	False	NA	15	True	AGTAAA	-20	NA	49378699	49441961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.7	chr2	+	3864	11	NNC	ENSMUSG00000069495.13	novel	4697	14	NA	NA	-6364	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.11726554943227	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGCCTTATGTGATATA	NA	False	NA	6	True	AGTAAA	-11	NA	49412522	49441952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435726_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.8	chr2	+	2705	9	NIC	ENSMUSG00000069495.13	novel	4697	14	NA	NA	21	-766	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	8.55862138431185	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCATGCTGCATATGT	NA	False	NA	11	True	AATAAA	-16	NA	49418907	49441194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_49419009_49420022_49420156_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ES.19013.9	chr2	+	3564	1	NIC	ENSMUSG00000069495.13	novel	4697	14	NA	NA	14022	-5488	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTTAGTCTCAAAGTTGA	NA	False	NA	NA	False	AATAAA	-2	NA	49432908	49436472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_49432900_49436500
ES.19014.1	chr2	-	150	1	Intergenic	novelGene_15787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGATCAATTTCCA	NA	False	NA	NA	False	NA	NA	NA	49392162	49392012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_49392000_49392200
ES.19015.1	chr2	-	8425	1	Antisense	novelGene_ENSMUSG00000069495.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGCCCTACAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	49415211	49406786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_49406800_49415200
ES.19016.1	chr2	-	2057	1	Antisense	novelGene_ENSMUSG00000069495.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAGTTTTACATTTTCT	NA	False	NA	NA	False	NA	NA	NA	49419367	49417310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_49417300_49419400
ES.19017.1	chr2	-	3667	1	Intergenic	novelGene_15788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAGACA	2092	False	NA	NA	False	NA	NA	NA	49450775	49447108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_49447100_49450800
ES.19018.1	chr2	+	6883	26	FSM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	-27	0	-27	0	multi-exon	TRUE	canonical	3	10	junction_25	6.95056832208705	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	49509282	49664790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
ES.19018.2	chr2	+	3254	25	NNC	ENSMUSG00000026764.16	novel	6856	26	NA	NA	-6	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	8.01517657669222	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTGGGGTATTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	49509303	49648943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642262_49642366_49647350_49647568_49648821
ES.19018.3	chr2	+	3617	17	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	8	34337	8	4857	5prime_fragment	FALSE	canonical	3	15	junction_6	6.86021136700612	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGGATGATGTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	49509317	49630453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094
ES.19018.5	chr2	+	5916	18	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81066	-1	-215	1	3prime_fragment	FALSE	canonical	3	10	junction_17	7.40616034613513	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGTGTCCTTATTTG	NA	False	NA	18	True	AATAAA	-19	NA	49590375	49664791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
ES.19018.6	chr2	+	689	3	ISM	ENSMUSG00000026764.16	ENSMUST00000146247.2	729	7	-200	19219	-200	-19219	5prime_fragment	FALSE	canonical	3	34	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGCCCCAGCTCATTC	NA	False	NA	NA	False	ACTAAA	-18	NA	49590390	49601044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_49590618_49590968_49591118_49600731
ES.19018.7	chr2	+	4118	5	NNC	ENSMUSG00000026764.16	novel	6856	26	NA	NA	-3264	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.1894019222742	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTCTGGTGTCCTTA	NA	False	NA	14	True	AATAAA	-15	NA	49638937	49664787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49639042_49639310_49639383_49647350_49647568_49648821_49648935_49661175
ES.19019.1	chr2	-	7718	1	Antisense	novelGene_ENSMUSG00000026764.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49564742	49557024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_49557000_49564700
ES.1902.1	chr1	-	177	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACTAAGATG	NA	False	NA	NA	False	NA	NA	NA	171260801	171260624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171260600_171260800
ES.19020.1	chr2	-	226	1	Intergenic	novelGene_15789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGATAAACCAACCAA	NA	False	NA	NA	False	NA	NA	NA	49900113	49899887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_49899900_49900100
ES.19021.1	chr2	-	178	1	Intergenic	novelGene_15790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49907654	49907476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_49907500_49907700
ES.19022.1	chr2	+	3510	5	FSM	ENSMUSG00000050447.16	ENSMUST00000112712.10	3495	5	-21	6	-21	0	multi-exon	FALSE	canonical	1	1	junction_4	1.73205080756888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGCTTCTTCCTGCGAG	NA	False	NA	NA	False	AATAAA	-18	NA	49956419	50083575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_49956597_50055480_50055670_50063612_50063712_50078722_50078854_50080661
ES.19022.2	chr2	+	3588	6	NNC	ENSMUSG00000050447.16	novel	3620	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.31516738055805	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGCTTCTTCCTGCGAG	NA	False	NA	NA	False	AATAAA	-18	NA	49956439	50083575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49956597_49997566_49997665_50055480_50055670_50063612_50063712_50078722_50078854_50080661
ES.19022.3	chr2	+	3621	6	NNC	ENSMUSG00000050447.16	novel	563	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.31516738055805	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGCTTCTTCCTGCGAG	NA	False	NA	NA	False	AATAAA	-18	NA	49956473	50083575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_49956597_50012157_50012323_50055480_50055670_50063612_50063712_50078722_50078854_50080661
ES.19023.1	chr2	-	1285	10	NNC	ENSMUSG00000026766.17	novel	803	8	NA	NA	2	3776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	279.977027276291	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTATGAAACAATATAAT	NA	False	NA	NA	False	NA	NA	NA	50186697	50166116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_50166254_50169506_50169612_50170119_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
ES.19023.10	chr2	-	1621	7	ISM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-18	-467	-10	-2	intron_retention	FALSE	canonical	3	69	junction_6	213.816445163187	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186717	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263
ES.19023.12	chr2	-	4618	7	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	465	junction_6	78.3547842969542	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186709	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50186322_50186654
ES.19023.13	chr2	-	7191	5	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	562	junction_1	44.5869936192159	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186697	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50181515_50182820
ES.19023.14	chr2	-	1278	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-8	-467	0	-2	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186707	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
ES.19023.15	chr2	-	1424	9	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	256.06270594329	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186727	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50170584_50170671_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ES.19023.16	chr2	-	8017	1	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	1300	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50177911	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50169900_50177900
ES.19023.19	chr2	-	8208	7	NNC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	231.031323032662	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186701	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_50170415_50171114_50173667_50173708_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
ES.19023.2	chr2	-	1752	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	7	-417	7	417	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	50186722	50169475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ES.19023.20	chr2	-	1247	8	NIC	ENSMUSG00000026766.17	novel	803	8	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	263.231022922017	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTTGTGTTTTTTATT	NA	False	NA	-3	True	AATAAA	-17	NA	50186712	50169895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186689
ES.19023.21	chr2	-	1317	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTTGTGTTTTTTATT	NA	False	NA	-3	True	AATAAA	-17	NA	50186742	50169895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
ES.19023.24	chr2	-	1102	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	-1	241	-1	228	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTTTCTAGGTATTT	NA	False	NA	NA	False	TATAAA	-29	NA	50186730	50170133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ES.19023.4	chr2	-	9404	4	NNC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	-1828	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	265.877164620557	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50181039	50169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_50170415_50171114_50173667_50173708_50177938_50178938
ES.19023.5	chr2	-	5641	5	ISM	ENSMUSG00000026766.17	ENSMUST00000144143.8	1079	6	-4	-1260	2	0	intron_retention	FALSE	canonical	3	566	junction_2	49.4267134250296	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186697	50169892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820
ES.19023.7	chr2	-	1289	8	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186733	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
ES.19023.8	chr2	-	1688	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	-15	2	-15	-2	intron_retention	FALSE	canonical	3	533	junction_6	61.03664655125	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186744	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
ES.19023.9	chr2	-	1349	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	-9	2	-9	-2	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTTTTTTATTG	NA	False	NA	-2	True	AATAAA	-18	NA	50186738	50169894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ES.19024.1	chr2	+	2598	3	Intergenic	novelGene_15791	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	10.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	50880813	50890619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_50881089_50885477_50887315_50890133
ES.19024.2	chr2	+	3273	3	Intergenic	novelGene_15792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	50884465	50890619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_50886218_50886279_50887315_50890133
ES.19025.1	chr2	-	3929	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	3	-1104	2	1104	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGCCACCTTGGTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	51039120	51019345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ES.19025.2	chr2	-	2904	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	-67	-9	-67	9	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTCTGCTTCTTGGCC	NA	False	NA	0	True	AATAAA	-25	NA	51039190	51020440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ES.19025.4	chr2	-	5737	4	NIC	ENSMUSG00000017144.9	novel	2828	5	NA	NA	7	-1	intron_retention	FALSE	canonical	3	469	junction_1	39.3728614939557	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGGGATGTTTTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	51039115	51020450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_51022558_51024094_51027258_51038235_51038324_51038736
ES.19025.5	chr2	-	2777	5	NNC	ENSMUSG00000017144.9	novel	2828	5	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	204.185424308397	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCTGGGATGTTTTC	NA	False	NA	-12	True	AATAAA	-13	NA	51039117	51020452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51022558_51024094_51024230_51027147_51027216_51038235_51038324_51038736
ES.19025.6	chr2	-	2468	5	NNC	ENSMUSG00000017144.9	novel	2828	5	NA	NA	618	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	216.450918223971	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCTGGGATGTTTTC	NA	False	NA	-12	True	AATAAA	-13	NA	51038488	51020452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038458
ES.19025.7	chr2	-	2829	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	-131	130	-131	-130	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTTTTGTTGCTTTTTT	NA	False	NA	-104	True	TATAAA	-4	NA	51039254	51020579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ES.19025.8	chr2	-	1881	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	4	943	3	454	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGATAGCGTGATTAA	NA	False	NA	NA	False	AATAAA	-14	NA	51039119	51021392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ES.19025.9	chr2	-	2810	1	NIC	ENSMUSG00000017144.9	novel	2828	5	NA	NA	11405	2189	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGTTAAATTGTAGAC	NA	False	NA	NA	False	NA	NA	NA	51027701	51024891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_51024900_51027700
ES.19026.1	chr2	+	175	1	Intergenic	novelGene_15793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAATAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	51248575	51248750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_51248600_51248800
ES.19027.1	chr2	-	6010	2	Intergenic	novelGene_15794	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCCAGGAATTGCTTC	NA	False	NA	NA	False	AAAAAG	-26	NA	51357638	51300820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_51306703_51357510
ES.19027.2	chr2	-	4100	3	NNC	ENSMUSG00000086007.2	novel	506	3	NA	NA	-8942	8183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATCAGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	51337739	51302812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51306703_51311179_51311254_51337603
ES.19027.3	chr2	-	3582	5	NNC	ENSMUSG00000086007.2	novel	383	2	NA	NA	-8982	7352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.29903810567666	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGCTCTCATGACATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	51337779	51303643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51306703_51326100_51326248_51328715_51328798_51331538_51331657_51337603
ES.19027.4	chr2	-	5968	5	NNC	ENSMUSG00000086007.2	novel	383	2	NA	NA	-8982	-7985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTCCTTGCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	51337779	51319046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51324492_51326061_51326248_51328715_51328798_51331538_51331657_51337642
ES.19027.5	chr2	-	4405	5	NNC	ENSMUSG00000086007.2	novel	383	2	NA	NA	-8961	-9579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.29903810567666	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCATGTGGCGTTTGG	NA	False	NA	NA	False	AATAAA	-42	NA	51337758	51320640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51324552_51326108_51326248_51328715_51328798_51331538_51331657_51337603
ES.19027.6	chr2	-	2129	4	NNC	ENSMUSG00000086007.2	novel	506	3	NA	NA	-8985	-15548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTATTTAGTTTTCCT	NA	False	NA	NA	False	TATAAA	-42	NA	51337782	51326609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51328273_51328713_51328798_51331538_51331781_51337642
ES.19027.7	chr2	-	826	4	NNC	ENSMUSG00000086007.2	novel	506	3	NA	NA	-8895	-16410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGAATTGACTCCTTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	51337692	51327471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51328007_51328713_51328798_51331538_51331657_51337603
ES.19028.1	chr2	-	3279	6	NNC	ENSMUSG00000036249.17	novel	2057	5	NA	NA	-5	1266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7643529358822	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCTGCATGCATCTT	NA	False	NA	NA	False	AATAAA	-15	NA	51825024	51813193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51813286_51813334_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
ES.19028.2	chr2	-	2077	5	NNC	ENSMUSG00000036249.17	novel	2057	5	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.0455931256497	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAACTGTGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	51825155	51814468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824950
ES.19028.3	chr2	-	2203	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	-155	9	1	-6	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAACTGTGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	51825174	51814468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
ES.19028.4	chr2	-	1904	4	NIC	ENSMUSG00000036249.17	novel	2057	5	NA	NA	20	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.8884444373331	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAACTGTGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	51824999	51814468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_51815947_51816692_51816773_51819671_51819862_51824843
ES.19029.1	chr2	-	1120	9	FSM	ENSMUSG00000026946.10	ENSMUST00000145481.8	1162	9	44	-2	10	2	multi-exon	FALSE	canonical	1	2	junction_3	2.57087047515039	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTTCTTACTCTTTGA	8686	False	NA	NA	False	CATAAA	-19	NA	51862972	51838510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_51838789_51839995_51840103_51842453_51842641_51842787_51842895_51845937_51846101_51848908_51849005_51850582_51850673_51862599_51862640_51862920
ES.1903.1	chr1	+	1952	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-29	368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.7212296468916	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTTGAACATGGAA	NA	False	NA	18	True	AATAAA	-20	NA	171265073	171291581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.11	chr1	+	1100	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	3	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.7212296468916	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACATCATCTACTT	NA	False	NA	NA	False	TATAAA	-1	NA	171265149	171290805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.12	chr1	+	2339	8	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-2488	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.5460253254328	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAATTTTTTTTATGT	6616	False	NA	15	True	ATTAAA	-15	NA	171287929	171292163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.2	chr1	+	2537	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.7212296468916	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTATGTTTTTTTTT	NA	False	NA	23	True	ATTAAA	-23	NA	171265078	171292171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.3	chr1	+	1919	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-10	362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	107.282847533984	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTCTTTTTTGTTGAAC	NA	False	NA	12	True	AATAAA	-14	NA	171265092	171291575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288967_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.4	chr1	+	2070	8	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	3	362	intron_retention	FALSE	non_canonical	0	0	junction_6	87.2858311900082	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTCTTTTTTGTTGAAC	NA	False	NA	12	True	AATAAA	-14	NA	171265105	171291575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.6	chr1	+	1917	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	21	364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	107.282847533984	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTTTTGTTGAACAT	NA	False	NA	14	True	AATAAA	-16	NA	171265123	171291577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289111_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.7	chr1	+	1598	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-20	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.7212296468916	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTAGTCACTCTTCAT	NA	False	NA	NA	False	AAGAAA	-37	NA	171265126	171291280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.8	chr1	+	2001	8	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-20	364	intron_retention	FALSE	non_canonical	0	0	junction_6	86.1526883752661	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTTTTGTTGAACAT	NA	False	NA	14	True	AATAAA	-16	NA	171265126	171291577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.1903.9	chr1	+	1866	9	NNC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	-16	364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	103.654474095429	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTTTTGTTGAACAT	NA	False	NA	14	True	AATAAA	-16	NA	171265130	171291577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288519_171288768_171288975_171289130_171289234_171289372_171289485_171290452_171290509_171290626
ES.19030.1	chr2	-	152	1	Intergenic	novelGene_15795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGAGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	51941463	51941311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_51941300_51941500
ES.19031.1	chr2	+	157	1	Intergenic	novelGene_15796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	51951178	51951335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_51951200_51951300
ES.19032.1	chr2	+	8205	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-3714	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	151.500398059691	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACCACTGCCTTTTTTC	NA	False	NA	11	True	ATTAAA	-23	NA	51959129	52012131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51959146_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.10	chr2	+	8657	37	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1302	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	183.222845494526	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51961541	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.100	chr2	+	4861	31	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	3555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	158.712598393728	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGAAGAGGAAGTTATGA	NA	False	NA	NA	False	AATAGA	-42	NA	51962843	52001292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.101	chr2	+	4772	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	3555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	114.82558763923	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGAAGAGGAAGTTATGA	NA	False	NA	NA	False	AATAGA	-42	NA	51962843	52001292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.102	chr2	+	8068	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	158.776855887116	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTTTATTTTCTCAAA	NA	False	NA	-48	True	AATAAA	-30	NA	51962843	52012072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.103	chr2	+	10390	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	171.367155665303	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTCTTGGACTCTTAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	51962843	52014310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.104	chr2	+	12883	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	4395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTCCTTGATTTT	NA	False	NA	22	True	AATAAA	-23	NA	51962843	52016790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.105	chr2	+	7960	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	-175	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTTCTGCAGCTTT	NA	False	NA	26	True	TATAAA	-21	NA	51962845	52011893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.106	chr2	+	3823	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	2608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	114.82558763923	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGAAAAGAGAAGTGAC	NA	False	NA	18	True	NA	NA	NA	51962845	52000345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.107	chr2	+	10512	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_15	136.161000957757	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962845	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.108	chr2	+	8116	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	133.152395974061	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962845	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.109	chr2	+	7853	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	2	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	217.393960076059	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCACTGCCTTTTTTCTT	NA	False	NA	13	True	ATTAAA	-25	NA	51962845	52012133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972820_51975038_51975191_51978659_51978778_51979535_51979584_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011272
ES.19032.11	chr2	+	8429	35	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1265	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	149.536712461196	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51961578	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.111	chr2	+	8155	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	-64	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_21	166.78895513659	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGATATTTGTAGGA	NA	False	NA	-15	True	AGTAAA	-17	NA	51962846	52012004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51992223_51992309_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.112	chr2	+	8840	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	6	intron_retention	FALSE	canonical	0	0	junction_16	131.388169981443	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962846	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.115	chr2	+	7755	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	-333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	166.439968083927	1007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTTCATTTTGCATT	NA	False	NA	NA	False	NA	NA	NA	51962846	52011735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998608_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.116	chr2	+	9642	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	204.175352073809	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962846	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51992223_51992309_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006963_52009028_52009183_52010271
ES.19032.117	chr2	+	8875	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3	-1994	intron_retention	FALSE	canonical	3	241	junction_1	92.327028942978	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	51962846	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028
ES.19032.118	chr2	+	10126	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-61	intron_retention	FALSE	non_canonical	0	0	junction_14	173.080123380111	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATATTTGTAGGAGTC	NA	False	NA	-12	True	AGTAAA	-20	NA	51962848	52012007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993714_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006965_52009028_52009183_52010271_52010381_52011003
ES.19032.119	chr2	+	8598	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-181	intron_retention	FALSE	canonical	0	0	junction_16	131.388169981443	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCATGGGTTTTTCTGC	NA	False	NA	20	True	TATAAA	-15	NA	51962848	52011887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.122	chr2	+	8273	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	157.378301540963	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTTACATACCACTG	NA	False	NA	2	True	ATTAAA	-14	NA	51962848	52012122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988100_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.123	chr2	+	9434	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_16	134.645649288642	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGTAGTTAGTGCCTG	NA	False	NA	20	True	ATTAAA	-15	NA	51962848	52012391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.124	chr2	+	12847	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	4384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	147.806840304555	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTTATTTTTGT	NA	False	NA	11	True	AATAAA	-12	NA	51962848	52016779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998608_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.126	chr2	+	7665	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	131.388169981443	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATATGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	51962848	52010954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.127	chr2	+	8133	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	155.681824404222	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962848	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.128	chr2	+	12958	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	4386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	171.541864018994	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTTTATTTTTGTTC	NA	False	NA	13	True	AATAAA	-14	NA	51962848	52016781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.129	chr2	+	616	7	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	1125	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	224.176084064886	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	51962848	51968142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968072
ES.19032.13	chr2	+	8154	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1244	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	161.767078712271	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAAACATGAGT	NA	False	NA	40	True	AATAAA	-17	NA	51961599	52012059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979534_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.133	chr2	+	4840	32	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	166.458314443739	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51962848	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52000683_52011772
ES.19032.135	chr2	+	8040	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	167.98769030944	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962848	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.139	chr2	+	8068	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	171.541864018994	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTTTTTCTGCAGCT	NA	False	NA	24	True	TATAAA	-19	NA	51962848	52011891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.14	chr2	+	8048	35	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1244	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	174.357962140929	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATATTTGTAGGAGTC	NA	False	NA	-12	True	AGTAAA	-20	NA	51961599	52012007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009027_52009183_52010271_52010381_52011003
ES.19032.141	chr2	+	8898	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	10	-71	intron_retention	FALSE	canonical	0	0	junction_16	167.552032496625	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTTATATGTACGTT	NA	False	NA	8	True	ACTAAA	-23	NA	51962853	52012322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ES.19032.143	chr2	+	8277	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	167.666340797869	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962854	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.144	chr2	+	8010	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_25	147.915016398351	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTTTATTTTCTCAAA	NA	False	NA	-48	True	AATAAA	-30	NA	51962854	52012072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.145	chr2	+	10233	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	12	2	intron_retention	FALSE	canonical	0	0	junction_15	134.725094956629	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	26	True	ATTAAA	-21	NA	51962855	52012397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.146	chr2	+	7787	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	12	-181	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	155.506784299815	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGCATGGGTTTTTCTGC	NA	False	NA	20	True	TATAAA	-15	NA	51962855	52011887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.148	chr2	+	8536	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.302271706319	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962857	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.149	chr2	+	8497	31	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	14	-1994	intron_retention	FALSE	canonical	0	0	junction_15	122.93973681804	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	51962857	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006963_52009028
ES.19032.150	chr2	+	8148	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	15	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.302271706319	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACTGTGGATATTTGTA	NA	False	NA	-18	True	AGTAAA	-14	NA	51962858	52012001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965335_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.151	chr2	+	8061	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	15	-61	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATATTTGTAGGAGTC	NA	False	NA	-12	True	AGTAAA	-20	NA	51962858	52012007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.152	chr2	+	3388	29	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	15	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	116.785927260618	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCGGTGCTTGAACTT	NA	False	NA	NA	False	NA	NA	NA	51962858	51999415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362
ES.19032.154	chr2	+	14887	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	16	4390	intron_retention	FALSE	canonical	0	0	junction_14	128.344062375738	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTTTTGTTCCTTG	NA	False	NA	17	True	AATAAA	-18	NA	51962859	52016785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.155	chr2	+	9098	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	16	3	intron_retention	FALSE	canonical	0	0	junction_16	131.388169981443	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTAGTGCCTGCCTTCAC	NA	False	NA	27	True	ATTAAA	-22	NA	51962859	52012398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.156	chr2	+	9958	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	17	6	intron_retention	FALSE	canonical	0	0	junction_15	134.725094956629	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962860	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.157	chr2	+	1013	7	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	17	4239	intron_retention	FALSE	canonical	3	505	junction_6	41.5561868638915	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACTATTTAAGAATAAA	NA	False	NA	NA	False	GATAAA	-40	NA	51962860	51971256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237
ES.19032.158	chr2	+	8417	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	159.415131828993	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962860	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.159	chr2	+	7966	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	17	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	159.042074583707	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCATGGGTTTTTCTGCAG	NA	False	NA	22	True	TATAAA	-17	NA	51962860	52011889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.16	chr2	+	8373	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1240	11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	164.411147146787	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCACTGCCTTTTTTCT	NA	False	NA	12	True	ATTAAA	-24	NA	51961603	52012132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51962673_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.160	chr2	+	7989	32	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	17	-3	intron_retention	FALSE	canonical	0	0	junction_16	148.082801597729	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51962860	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52002363_52009137_52009183_52010271
ES.19032.161	chr2	+	8560	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	18	3	intron_retention	FALSE	non_canonical	0	0	junction_16	136.222620689486	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962861	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983601_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.162	chr2	+	7846	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	18	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	157.879744871945	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTTTTTCTGCAGCT	NA	False	NA	24	True	TATAAA	-19	NA	51962861	52011891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.163	chr2	+	8824	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_16	172.487609729523	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962861	52012395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51982795_51982880_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.164	chr2	+	8202	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	159.042074583707	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTACATACCACTGCCTT	NA	False	NA	6	True	ATTAAA	-18	NA	51962861	52012126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.165	chr2	+	8380	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	20	3	intron_retention	FALSE	non_canonical	0	0	junction_8	195.50876391527	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962863	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975040_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995642_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009027_52009183_52010271_52010381_52011003
ES.19032.166	chr2	+	3421	25	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	31	100	intron_retention	FALSE	canonical	0	0	junction_15	113.822893310909	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTTTGGTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51962874	51997837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649
ES.19032.167	chr2	+	8509	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	138.623259820512	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962874	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.168	chr2	+	8354	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	34	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	183.086542647911	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962877	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.169	chr2	+	2092	15	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	35	-5487	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_14	142.442200952684	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAACTGGTTTGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	51962878	51982969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51982795
ES.19032.17	chr2	+	13521	35	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1219	4410	intron_retention	FALSE	canonical	0	0	junction_16	148.101760583355	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAAATCTGTTTTGTA	NA	False	NA	37	True	AATAAA	-38	NA	51961624	52016805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.170	chr2	+	8731	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.458850437548	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962878	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.171	chr2	+	8812	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	35	1	intron_retention	FALSE	canonical	0	0	junction_15	129.871676449294	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTTACATACCACTG	NA	False	NA	2	True	ATTAAA	-14	NA	51962878	52012122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.172	chr2	+	8399	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	36	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	155.50727441729	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962879	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.173	chr2	+	8161	35	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	36	6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	149.352350391529	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962879	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.174	chr2	+	10528	31	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	36	6	intron_retention	FALSE	non_canonical	0	0	junction_15	204.459854793605	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962879	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51982795_51982880_51983514_51983601_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995450_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006963_52009028
ES.19032.176	chr2	+	8270	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	36	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	151.906912156549	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962879	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.177	chr2	+	8478	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.016651010283	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	51962881	52012068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995450_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.178	chr2	+	4057	29	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	38	2608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.791625086439	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGAAAAGAGAAGTGAC	NA	False	NA	18	True	NA	NA	NA	51962881	52000345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.18	chr2	+	8170	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-526	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.411147146787	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	51962317	52012068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962366_51962804_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.180	chr2	+	2123	10	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	40	9011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	174.072639868008	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGTAGTGACTTGCTT	NA	False	NA	NA	False	ATTAAA	-30	NA	51962883	51976028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51975260
ES.19032.181	chr2	+	8131	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	45	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	151.753485277431	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTTTTCTGCAGCTT	NA	False	NA	25	True	TATAAA	-20	NA	51962888	52011892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.182	chr2	+	8274	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	45	-9	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	141.068459892678	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAAACATGAGT	NA	False	NA	40	True	AATAAA	-17	NA	51962888	52012059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.185	chr2	+	13074	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	69	4385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	126.478033296594	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTATTTTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	51962912	52016780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.186	chr2	+	8535	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	69	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	161.894062584148	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTAGTGCCTGCCTTCAC	NA	False	NA	27	True	ATTAAA	-22	NA	51962912	52012398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.187	chr2	+	8554	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	69	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.281852336346	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51962912	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979584_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.188	chr2	+	5437	29	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	70	4044	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_15	89.69565889434	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATCTACAAGTACCTG	NA	False	NA	NA	False	TATAAA	-19	NA	51962913	52001781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.189	chr2	+	8292	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	71	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	126.478033296594	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTACTGTGGATATTTGT	NA	False	NA	-19	True	AGTAAA	-13	NA	51962914	52012000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.19	chr2	+	10366	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-491	-3	intron_retention	FALSE	canonical	0	0	junction_14	128.146638914945	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51962352	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.190	chr2	+	4548	29	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	71	3134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	139.879886520762	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCCAAGAGTCCGTTG	NA	False	NA	NA	False	AAAAAG	-26	NA	51962914	52000871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996914_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.192	chr2	+	9231	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	72	2	intron_retention	FALSE	canonical	0	0	junction_15	161.818752293268	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	26	True	ATTAAA	-21	NA	51962915	52012397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966994_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ES.19032.193	chr2	+	8692	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.635722669188	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962916	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.194	chr2	+	8132	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-31	-66	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_15	113.272721087473	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGTGGATATTTGTAG	NA	False	NA	-17	True	AGTAAA	-15	NA	51963052	52012002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.196	chr2	+	8337	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	153.605322307928	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51963141	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.197	chr2	+	8131	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	58	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.268229247479	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACTGTGGATATTTGTA	NA	False	NA	-18	True	AGTAAA	-14	NA	51963141	52012001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.199	chr2	+	8410	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	151.500398059691	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51963141	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52000207_52000251_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.2	chr2	+	8644	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1353	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	149.172832236809	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTTCATGGGTTT	NA	False	NA	46	True	ATTAAA	-41	NA	51961490	52012417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.20	chr2	+	8854	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-481	6	intron_retention	FALSE	canonical	0	0	junction_15	153.407617342893	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962362	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979584_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.200	chr2	+	8756	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	58	0	intron_retention	FALSE	non_canonical	0	0	junction_8	174.47705941123	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	51963141	52012068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975040_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988366_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.203	chr2	+	7477	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	65	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	184.967437491302	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTTACATACCACTG	NA	False	NA	2	True	ATTAAA	-14	NA	51963148	52012122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52001475_52002266_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.204	chr2	+	9306	32	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	1378	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	141.534889232045	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTTTTTCTGCAGCT	NA	False	NA	24	True	TATAAA	-19	NA	51964461	52011891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.205	chr2	+	8085	31	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	3905	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	168.795869486062	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51966988	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998608_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.206	chr2	+	7626	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	4120	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	145.544555370847	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACATGAGTTTATTTT	NA	False	NA	47	True	AATAAA	-24	NA	51967203	52012066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.207	chr2	+	7590	29	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5257	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	148.093565294488	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51968340	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.208	chr2	+	7433	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5257	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	163.73718827807	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTTCTGCAGCTTT	NA	False	NA	26	True	TATAAA	-21	NA	51968340	52011893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994561_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.209	chr2	+	4873	1	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	5748	6687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAATATAGATATGTAAC	NA	False	NA	NA	False	NA	NA	NA	51968831	51973704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51968800_51973700
ES.19032.21	chr2	+	9243	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-480	5	intron_retention	FALSE	canonical	0	0	junction_15	126.478033296594	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTGCCTTCACAT	NA	False	NA	29	True	ATTAAA	-24	NA	51962363	52012400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.210	chr2	+	7979	28	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	8167	0	intron_retention	FALSE	canonical	2	7	junction_16	156.477619939205	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51971250	52012395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995450_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.211	chr2	+	7177	24	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-54	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	161.069429311093	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTGCCTTCACAT	7169	False	NA	29	True	ATTAAA	-24	NA	51979530	52012400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.214	chr2	+	7866	23	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_4	185.235610520652	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATGTTACATACCAC	7219	False	NA	0	True	ATTAAA	-12	NA	51979580	52012120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51979701_51980185_51980297_51982053_51982117_51982291_51983602_51984600_51984675_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.215	chr2	+	6853	22	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-903	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	189.723010891347	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	9942	False	NA	26	True	ATTAAA	-21	NA	51982303	52012397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999246_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.217	chr2	+	8330	20	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	151	369	intron_retention	FALSE	canonical	3	389	junction_4	109.790634297746	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAGCATAAATCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	51983357	52012764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.218	chr2	+	7297	21	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	354	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.270712938694	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51983560	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51984145_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.219	chr2	+	6426	19	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	1340	6	combination_of_known_junctions	FALSE	canonical	3	196	junction_15	137.228711047661	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51984546	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.22	chr2	+	8702	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-480	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATACCACTGCCTTTTT	NA	False	NA	9	True	ATTAAA	-21	NA	51962363	52012129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.220	chr2	+	6143	18	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	25082	323	4719	4	3prime_fragment	FALSE	canonical	3	389	junction_2	112.728077146568	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTTTATTTTCTCAAA	NA	False	NA	-48	True	AATAAA	-30	NA	51987925	52012072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.221	chr2	+	6028	17	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	25524	328	5161	-1	3prime_fragment	FALSE	canonical	3	389	junction_1	116.195350057565	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATGAGTTTATTTTC	NA	False	NA	48	True	AATAAA	-25	NA	51988367	52012067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.224	chr2	+	5315	13	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-5397	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	198.491446079338	997	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTTTATTTTCTCAA	NA	False	NA	-49	True	AATAAA	-29	NA	51995598	52012071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999928_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.225	chr2	+	5522	11	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-4090	-1	combination_of_known_junctions	FALSE	canonical	3	196	junction_7	172.649239789812	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTAGTTAGTGCCTGCCT	NA	False	NA	23	True	ATTAAA	-18	NA	51996905	52012394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.226	chr2	+	9608	9	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	36359	-4385	-1793	4385	3prime_fragment	FALSE	canonical	3	497	junction_2	104.721953285832	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTATTTTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	51999202	52016780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.227	chr2	+	5167	8	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1793	22	combination_of_known_junctions	FALSE	canonical	3	196	junction_4	189.145770370314	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTTCATGGGTTT	NA	False	NA	46	True	ATTAAA	-41	NA	51999202	52012417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.228	chr2	+	4620	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	-2228	392	-1079	-67	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACTGTGGATATTTGTA	NA	False	NA	-18	True	AGTAAA	-14	NA	51999916	52012001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.229	chr2	+	8329	3	NIC	ENSMUSG00000036202.17	novel	3885	6	NA	NA	-355	3	intron_retention	FALSE	canonical	3	723	junction_1	11	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	52000640	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_52006963_52009028_52009183_52010271
ES.19032.23	chr2	+	8727	37	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-395	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.967437491302	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962448	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962637_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.231	chr2	+	3800	7	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-61	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	329.479766703005	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	52000934	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_52003013_52006259_52006407_52006683_52006758_52006846_52006960_52009027_52009183_52010271_52010381_52011003
ES.19032.232	chr2	+	3526	4	NIC	ENSMUSG00000036202.17	novel	3601	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	723	junction_2	17.96292478041	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	52002140	52012068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_52003013_52006259_52006963_52009028_52009183_52010271
ES.19032.233	chr2	+	5351	7	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	39387	-2573	86	2573	3prime_fragment	FALSE	canonical	3	521	junction_3	89.7100266909384	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTAATTCCTTTTAAC	NA	False	NA	NA	False	ATTAAA	-22	NA	52002230	52014968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.234	chr2	+	3086	5	NIC	ENSMUSG00000036202.17	novel	3885	6	NA	NA	401	1	intron_retention	FALSE	canonical	3	521	junction_2	98.2344135219425	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTTACATACCACTG	NA	False	NA	2	True	ATTAAA	-14	NA	52002545	52012122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_52003013_52006259_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.235	chr2	+	6774	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	638	-4628	638	4626	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATGTGCTAGTTTT	NA	False	NA	23	True	ATTAAA	-25	NA	52002782	52017021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.236	chr2	+	6236	5	ISM	ENSMUSG00000036202.17	ENSMUST00000112693.10	8509	36	43834	-4385	4533	4385	3prime_fragment	FALSE	canonical	3	521	junction_1	87.6908632640824	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTATTTTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	52006677	52016780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.237	chr2	+	1826	1	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	6104	-1994	mono-exon	FALSE	NA	NA	NA	NA	NA	948	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	52008248	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_52008200_52010100
ES.19032.238	chr2	+	6039	3	ISM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	6883	-4385	6883	4383	3prime_fragment	FALSE	canonical	3	682	junction_2	31.5	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTGTTTATTTTTG	NA	False	NA	10	True	AATAAA	-11	NA	52009027	52016778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_52009183_52010271_52010381_52011003
ES.19032.24	chr2	+	8941	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-209	0	intron_retention	FALSE	canonical	3	117	junction_15	113.272721087473	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962634	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.25	chr2	+	8090	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-119	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.024052803123	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTTTATTTTCTCAAA	NA	False	NA	-48	True	AATAAA	-30	NA	51962724	52012072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964342_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.26	chr2	+	8586	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-118	4	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGTGCCTGCCTTCACA	NA	False	NA	28	True	ATTAAA	-23	NA	51962725	52012399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.27	chr2	+	8531	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-116	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTGCCTTCACAT	NA	False	NA	29	True	ATTAAA	-24	NA	51962727	52012400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.28	chr2	+	8329	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-113	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	161.654900757062	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTTTATTTTCTCAAA	NA	False	NA	-48	True	AATAAA	-30	NA	51962730	52012072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995450_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.29	chr2	+	8113	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-100	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCTACTGTGGATATTT	NA	False	NA	-21	True	AGTAAA	-11	NA	51962743	52011998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.3	chr2	+	4598	30	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1316	3284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	135.032659985584	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAATAGAAGAAAACCA	NA	False	NA	NA	False	NA	NA	NA	51961527	52001021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.30	chr2	+	8585	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-95	6	intron_retention	FALSE	canonical	0	0	junction_15	126.478033296594	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962748	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.31	chr2	+	8497	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	155.681824404222	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962753	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.32	chr2	+	8453	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-65	6	intron_retention	FALSE	canonical	3	117	junction_15	127.126048233938	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962778	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.33	chr2	+	8719	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-65	0	intron_retention	FALSE	canonical	3	117	junction_15	127.126048233938	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962778	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.34	chr2	+	8280	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	164.742411178228	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	51962779	52012068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011027
ES.19032.35	chr2	+	9443	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-64	0	intron_retention	FALSE	canonical	0	0	junction_15	125.017273370343	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962779	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.36	chr2	+	9095	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-64	0	intron_retention	FALSE	canonical	0	0	junction_16	142.564959498355	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962779	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ES.19032.38	chr2	+	8741	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-59	2	intron_retention	FALSE	canonical	0	0	junction_15	139.06799837718	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	26	True	ATTAAA	-21	NA	51962784	52012397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.39	chr2	+	8457	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-39	13	intron_retention	FALSE	canonical	0	0	junction_14	151.753485277431	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGCCTTTTTTCTTA	NA	False	NA	14	True	ATTAAA	-26	NA	51962804	52012134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.4	chr2	+	8407	34	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1316	3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	169.41165950575	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTAGTGCCTGCCTTCAC	NA	False	NA	27	True	ATTAAA	-22	NA	51961527	52012398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.41	chr2	+	8255	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-27	-174	intron_retention	FALSE	non_canonical	0	0	junction_21	145.53954587089	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTTCTGCAGCTTTT	NA	False	NA	27	True	TATAAA	-22	NA	51962816	52011894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993748_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.42	chr2	+	8282	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-26	-175	intron_retention	FALSE	canonical	0	0	junction_15	126.478033296594	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTTTTCTGCAGCTTT	NA	False	NA	26	True	TATAAA	-21	NA	51962817	52011893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.43	chr2	+	8677	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	183.086542647911	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962819	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.45	chr2	+	8516	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-23	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGCCTGCCTTCACAT	NA	False	NA	29	True	ATTAAA	-24	NA	51962820	52012400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.46	chr2	+	8434	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-22	6	intron_retention	FALSE	canonical	0	0	junction_15	139.06799837718	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962821	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.49	chr2	+	8344	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-14	3	intron_retention	FALSE	canonical	0	0	junction_14	161.894062584148	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962829	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.5	chr2	+	8503	35	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1314	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	159.213945525595	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51961529	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.50	chr2	+	8278	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-13	-177	intron_retention	FALSE	canonical	0	0	junction_3	177.458850437548	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTTTTTCTGCAGCT	NA	False	NA	24	True	TATAAA	-19	NA	51962830	52011891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.51	chr2	+	8479	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-13	6	intron_retention	FALSE	canonical	3	117	junction_15	113.272721087473	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962830	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.53	chr2	+	8578	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	148.990085959723	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962832	52012395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.54	chr2	+	8306	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	148.990085959723	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTACATACCACTGCC	NA	False	NA	4	True	ATTAAA	-16	NA	51962833	52012124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.55	chr2	+	8405	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	159.34499361329	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGTGCCTGCCTTCA	NA	False	NA	26	True	ATTAAA	-21	NA	51962835	52012397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.56	chr2	+	8874	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-8	378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATTACAGATATTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	51962835	52012773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.57	chr2	+	12809	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-8	4391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTTTGTTCCTTGA	NA	False	NA	18	True	AATAAA	-19	NA	51962835	52016786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.59	chr2	+	8203	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-7	6	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962836	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.60	chr2	+	4227	29	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-6	3101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	143.879874782219	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGAAAGACGAAAG	NA	False	NA	NA	False	NA	NA	NA	51962837	52000838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.61	chr2	+	3101	26	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-5	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	121.215748151798	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAACTGTCGGCCAAAGT	NA	False	NA	60	True	GATAAA	-10	NA	51962838	51997751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649
ES.19032.62	chr2	+	3148	24	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-3	-1837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	125.757831311238	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTGGTTTTGTTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	51962840	51995900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446
ES.19032.63	chr2	+	8187	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	202.026856100711	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTGTTTCATGGGTT	NA	False	NA	45	True	ATTAAA	-40	NA	51962842	52012416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979680_51982326_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998608_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.64	chr2	+	8363	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1015	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTTTTCACATATTT	NA	False	NA	-45	True	TATAAA	-15	NA	51962842	52012269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.65	chr2	+	4352	30	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	3134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	114.82558763923	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCCAAGAGTCCGTTG	NA	False	NA	NA	False	AAAAAG	-26	NA	51962842	52000871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922
ES.19032.66	chr2	+	10403	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	1914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTTCTTGGACTCTTAG	NA	False	NA	NA	False	ATTAAA	-16	NA	51962842	52014309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.67	chr2	+	8386	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	133.152395974061	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTAGTTAGTGCCTGCCT	NA	False	NA	23	True	ATTAAA	-18	NA	51962842	52012394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.69	chr2	+	9085	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	117	junction_16	119.105565836147	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962842	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ES.19032.7	chr2	+	8554	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1311	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	138.821029989505	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51961532	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.70	chr2	+	1584	14	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-6339	at_least_one_novel_splicesite	FALSE	canonical	3	241	junction_1	91.0474224571716	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACTGTCACAGTGGTC	NA	False	NA	11	True	NA	NA	NA	51962842	51982117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053
ES.19032.71	chr2	+	8914	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_16	165.359835252652	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962842	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979584_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ES.19032.72	chr2	+	7805	33	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-1994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	149.615127989911	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	51962842	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983606_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028
ES.19032.73	chr2	+	8165	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.231388468217	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGTTAAAACATGAGTT	NA	False	NA	41	True	AATAAA	-18	NA	51962842	52012060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.74	chr2	+	7907	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTTTTCTGCAGCTT	NA	False	NA	25	True	TATAAA	-20	NA	51962843	52011892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.75	chr2	+	8782	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.087250696058	1023	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCATAAATCATTACAGAT	NA	False	NA	NA	False	AATAAA	-19	NA	51962843	52012767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.76	chr2	+	8496	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.231388468217	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962843	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.77	chr2	+	7984	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGTTTTTCTGCAGCT	NA	False	NA	24	True	TATAAA	-19	NA	51962843	52011891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.79	chr2	+	8282	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.310799571879	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.80	chr2	+	7879	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	126.372254629442	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	51962843	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028
ES.19032.81	chr2	+	7649	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTTGACAGAGATGT	NA	False	NA	NA	False	AAGAAA	-17	NA	51962843	52011556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.82	chr2	+	8534	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	182.854566946142	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962843	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968072_51968199_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.83	chr2	+	12698	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	4385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	167.98769030944	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTTTATTTTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	51962843	52016780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.84	chr2	+	8765	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	6	intron_retention	FALSE	canonical	0	0	junction_16	142.564959498355	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962843	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271
ES.19032.85	chr2	+	8285	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.302271706319	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962843	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.86	chr2	+	8573	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	171.541864018994	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGTAGTTAGTGCCTG	NA	False	NA	20	True	ATTAAA	-15	NA	51962843	52012391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.87	chr2	+	8310	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.052028960236	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	51962843	52012393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.89	chr2	+	5324	1	NIC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	1150	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGACTGAATCTCATCC	NA	False	NA	NA	False	NA	NA	NA	51962843	51968167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_51962800_51968200
ES.19032.9	chr2	+	8304	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1305	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	149.172832236809	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACATACCACTGCCT	NA	False	NA	5	True	ATTAAA	-17	NA	51961538	52012125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.90	chr2	+	8363	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	174.195682533032	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962843	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006960_52009027_52009183_52010271_52010381_52011003
ES.19032.92	chr2	+	2913	14	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-3903	intron_retention	FALSE	canonical	3	26	junction_1	135.659074946664	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTTTGTTCAGGAT	NA	False	NA	NA	False	AATAAA	-24	NA	51962843	51984553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514
ES.19032.94	chr2	+	8528	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	217.325215138391	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGTAGTTAGTGCCT	NA	False	NA	19	True	ATTAAA	-14	NA	51962843	52012390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51982795_51982880_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999297_51999916_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010274_52010381_52011003
ES.19032.95	chr2	+	8095	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTGTGGATATTTGTAG	NA	False	NA	-17	True	AGTAAA	-15	NA	51962843	52012002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.96	chr2	+	8226	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	182.552590130256	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACATACCACTGCCTTT	NA	False	NA	7	True	ATTAAA	-19	NA	51962843	52012127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51982795_51982880_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.97	chr2	+	8307	37	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	171.541864018994	1012	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACATACCACTGCCT	NA	False	NA	5	True	ATTAAA	-17	NA	51962843	52012125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51965241_51965331_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.98	chr2	+	8462	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	149.352350391529	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTAGTTAGTGCCTGC	NA	False	NA	21	True	ATTAAA	-16	NA	51962843	52012392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ES.19032.99	chr2	+	7855	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	-1994	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	113.364239830557	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGAGGTTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	51962843	52010074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028
ES.19033.1	chr2	-	5876	13	Antisense	novelGene_ENSMUSG00000036202.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAATAACAACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	51984295	51961867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_51963264_51964256_51964340_51966093_51966186_51966988_51967120_51967203_51968533_51971237_51971329_51972674_51972814_51975036_51975189_51978657_51978773_51979530_51979696_51980180_51980295_51982051_51982115_51982289
ES.19034.1	chr2	+	1909	1	Antisense	novelGene_ENSMUSG00000026950.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	52026780	52028689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_52026800_52028700
ES.19035.1	chr2	-	10021	74	NIC	ENSMUSG00000026950.19	novel	23361	165	NA	NA	-3721	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.993315999467578	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATGGGCAACACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	52117470	52026673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52049488_52049582_52050667_52050761_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533_52067639_52067980_52068086_52069473_52069579_52073284_52073393_52073743_52073849_52075282_52075388_52077422_52077528_52078694_52078800_52079610_52079716_52079865_52079971_52081937_52082043_52082481_52082587_52083181_52083287_52083887_52083999_52084391_52084491_52085431_52085537_52085631_52085737_52086303_52086412_52087808_52087914_52089415_52089524_52090637_52090743_52091409_52091515_52091825_52092024_52092520_52092635_52094237_52094346_52094635_52094741_52094838_52094944_52095633_52095739_52096077_52096276_52096676_52096791_52096893_52097002_52097672_52097778_52098070_52098176_52098287_52098393_52099352_52099665_52100339_52100448_52100561_52100664_52100842_52100942_52101493_52101599_52102501_52102814_52102918_52103024_52106263_52106369_52106893_52107098_52109101_52109414_52110159_52110268_52110905_52111011_52111651_52111856_52112748_52113061_52114525_52114634_52115580_52115686_52116454_52116659_52117255
ES.19035.2	chr2	-	10267	77	NIC	ENSMUSG00000026950.19	novel	23361	165	NA	NA	-3688	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.987017528267879	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATGGGCAACACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	52117437	52026673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52040548_52040642_52040978_52041072_52041375_52041469_52049488_52049582_52050667_52050761_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533_52067639_52067980_52068086_52069473_52069579_52073284_52073393_52073743_52073849_52075282_52075388_52077422_52077528_52078694_52078800_52079610_52079716_52079865_52079971_52081937_52082043_52082481_52082587_52083181_52083287_52083887_52083999_52084391_52084491_52085431_52085537_52085631_52085737_52086303_52086412_52087808_52087914_52089415_52089524_52090637_52090743_52091409_52091515_52091825_52092024_52092520_52092635_52094237_52094346_52094635_52094741_52094838_52094944_52095633_52095739_52096077_52096276_52096676_52096791_52096893_52097002_52097672_52097778_52098070_52098176_52098287_52098393_52099352_52099665_52100339_52100448_52100561_52100664_52100842_52100942_52101493_52101599_52102501_52102814_52102918_52103024_52106263_52106369_52106893_52107098_52109101_52109414_52110159_52110268_52110905_52111011_52111651_52111856_52112748_52113061_52114525_52114634_52115580_52115686_52116454_52116659_52117255
ES.19035.3	chr2	-	2550	17	NIC	ENSMUSG00000026950.19	novel	10298	74	NA	NA	-996	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.927024810886958	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTGTTCATGGGCA	NA	False	NA	NA	False	AATAAA	-14	NA	52067622	52026680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52049488_52049582_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533
ES.19035.4	chr2	-	3086	23	NIC	ENSMUSG00000026950.19	novel	21456	152	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.717260629002705	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAACTGTTCATGGG	NA	False	NA	NA	False	AATAAA	-12	NA	52066615	52026682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52040548_52040642_52040978_52041072_52049488_52049582_52050667_52050761_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597
ES.19035.5	chr2	-	2301	1	NIC	ENSMUSG00000026950.19	novel	22489	157	NA	NA	87	816	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAACCCTTACC	NA	False	NA	NA	False	NA	NA	NA	52047837	52045536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52045500_52047800
ES.19036.1	chr2	-	1833	15	ISM	ENSMUSG00000026950.19	ENSMUST00000036934.12	22489	157	12	171762	12	-1808	5prime_fragment	TRUE	canonical	0	0	junction_3	1.05945692672795	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATCTGGCTGTTTTCCC	6799	False	NA	NA	False	AATAAA	-11	NA	52228798	52198420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_52198605_52198697_52198803_52200540_52200658_52203129_52203238_52203787_52203893_52209645_52209751_52214974_52215080_52215708_52215814_52216681_52216787_52216947_52217056_52218729_52218931_52220820_52220863_52224457_52224523_52225045_52225128_52228502
ES.19036.2	chr2	-	3614	9	NNC	ENSMUSG00000026950.19	novel	1004	10	NA	NA	12	-4029	intron_retention	FALSE	canonical	0	0	junction_5	0.7806247497998	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGGTAAATGAA	9047	False	NA	NA	False	NA	NA	NA	52268474	52213674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52215814_52216681_52216787_52216947_52217056_52218729_52218931_52220820_52220863_52224457_52225128_52257415_52257535_52257948_52258105_52268400
ES.19036.3	chr2	-	1421	5	ISM	ENSMUSG00000026950.19	ENSMUST00000238288.2	23256	164	7	191100	7	1072	5prime_fragment	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTTATTGCCATATAA	9830	False	NA	NA	False	AATAAA	-15	NA	52225767	52217773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_52218931_52220820_52220863_52224457_52224523_52225045_52225128_52225692
ES.19036.4	chr2	-	174	1	Intergenic	novelGene_15797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAATCCTAACAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	52246959	52246785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52246800_52247000
ES.19037.1	chr2	+	3813	1	Genic_Genomic	ENSMUSG00000086447.3	novel	NA	NA	NA	NA	580	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGCTCTTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	52276507	52280320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_52276500_52280300
ES.19038.1	chr2	-	5296	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-54	-3	-54	3	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGGGGTTTTTGTTG	4701	False	NA	0	True	AATAAA	-25	NA	52314967	52287959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.10	chr2	-	11546	1	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	470	2087	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGATATTTAATATATG	6677	False	NA	NA	False	ATTAAA	-20	NA	52301857	52290311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52290300_52301900
ES.19038.11	chr2	-	2498	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	7	2734	7	1702	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTGTAGTTTTGTCA	4762	False	NA	NA	False	ACTAAA	-16	NA	52314906	52290696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.12	chr2	-	2080	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-12	3171	-12	1265	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATTACTCTGTTTTAA	4743	False	NA	NA	False	TTTAAA	-34	NA	52314925	52291133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.13	chr2	-	1535	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	-8	872	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCATGGTGTGAAATAT	4747	False	NA	-4	True	ATTAAA	-23	NA	52314921	52291526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
ES.19038.14	chr2	-	1698	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-25	3566	-25	870	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATCATGGTGTGAAAT	4730	False	NA	-6	True	ATTAAA	-21	NA	52314938	52291528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.15	chr2	-	4174	1	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	6621	866	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGAAAATCATGGTGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	52295706	52291532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52291500_52295700
ES.19038.16	chr2	-	1539	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	-8	3708	-8	728	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGACTCCTGGCCTGGT	4747	False	NA	61	True	AATATA	-23	NA	52314921	52291670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.17	chr2	-	1306	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	5	3928	5	508	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTGTTCTCCTGATC	4760	False	NA	NA	False	NA	NA	NA	52314908	52291890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.18	chr2	-	1128	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	35	508	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTGTTCTCCTGATC	4790	False	NA	NA	False	NA	NA	NA	52314878	52291890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
ES.19038.19	chr2	-	1166	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	-7	508	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	155.877155157515	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTGTTCTCCTGATC	4748	False	NA	NA	False	NA	NA	NA	52314920	52291890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.2	chr2	-	5088	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTGGGGGTTTTTG	4758	False	NA	-3	True	AATAAA	-22	NA	52314910	52287962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
ES.19038.20	chr2	-	1180	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	29	4030	29	406	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTTCAAGTTGAAT	4784	False	NA	32	True	TTTAAA	-20	NA	52314884	52291992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.21	chr2	-	917	6	NNC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	330	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.793281507952	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAATTAAGACCAC	5085	False	NA	NA	False	AATAAA	-21	NA	52314583	52292280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314275
ES.19038.22	chr2	-	862	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	57	4320	57	116	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAGAAGAAAATTAAGACC	4812	False	NA	NA	False	AATAAA	-19	NA	52314856	52292282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.3	chr2	-	4863	7	NNC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.380224887845	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTCTTGGGGGTTTT	4762	False	NA	-5	True	AATAAA	-20	NA	52314906	52287964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52290416_52290782_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.5	chr2	-	5663	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	354	junction_2	33.6860505254029	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATATATATTCTTGGGG	4748	False	NA	-10	True	AATAAA	-15	NA	52314920	52287969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306709_52314601
ES.19038.6	chr2	-	3364	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	57	1818	57	-1818	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTTAGCACCGCTGG	4812	False	NA	NA	False	NA	NA	NA	52314856	52289780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.7	chr2	-	3254	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	2	1983	2	-1983	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGGGTTTTATTTTT	4757	False	NA	NA	False	NA	NA	NA	52314911	52289945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19038.8	chr2	-	3065	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	0	-2026	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATTTTGTCATAACAT	4755	False	NA	NA	False	GATAAA	-13	NA	52314913	52289988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
ES.19038.9	chr2	-	3062	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	2	2175	2	-2175	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGCTCAGCTTTGAAAA	4757	False	NA	NA	False	NA	NA	NA	52314911	52290137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ES.19039.1	chr2	-	4303	1	Genic_Genomic	ENSMUSG00000017412.16	novel	NA	NA	NA	NA	127190	3103	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCAATGATTTCTGCTG	7446	False	NA	NA	False	NA	NA	NA	52319531	52315228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_52315200_52319500
ES.19039.2	chr2	-	7023	12	NIC	ENSMUSG00000017412.16	novel	8039	14	NA	NA	2	-751	intron_retention	FALSE	canonical	0	0	junction_4	0.862439361864103	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTACGACTCATAC	8992	False	NA	NA	False	CATAAA	-15	NA	52446719	52319087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52446606
ES.19039.3	chr2	-	3726	11	NNC	ENSMUSG00000017412.16	novel	8039	14	NA	NA	51	-5668	intron_retention	FALSE	canonical	0	0	junction_4	0.9	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAGCTGTGGAATTTA	9041	False	NA	NA	False	AATAAA	-25	NA	52446670	52324004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52355609_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52446502
ES.1904.1	chr1	-	185	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	4068	False	NA	NA	False	NA	NA	NA	171283885	171283700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171283700_171283900
ES.19040.1	chr2	+	175	1	Intergenic	novelGene_15798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAAGTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	52542164	52542339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52542200_52542300
ES.19041.1	chr2	+	1887	1	Intergenic	novelGene_15799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCTCCACCTTGATTTA	NA	False	NA	NA	False	NA	NA	NA	52618837	52620724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52618800_52620700
ES.19042.1	chr2	-	4744	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-14	-13	-14	13	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATGTTTTTCTTCTTTT	NA	False	NA	NA	False	TATAAA	-25	NA	52632226	52581662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.10	chr2	-	4306	13	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	-149	-542	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	60.3330455794243	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATTGTAAATGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	52632442	52582217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609913_52609990_52610895_52610981_52632072
ES.19042.12	chr2	-	3779	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-11	949	-11	-949	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTTGAACTGTACTTAT	NA	False	NA	NA	False	NA	NA	NA	52632223	52582624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.13	chr2	-	3602	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-221	1336	-140	-1336	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGTGTAGAGGAATGCG	NA	False	NA	NA	False	AATAAA	-29	NA	52632433	52583011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.14	chr2	-	5813	12	NNC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	2	-1689	intron_retention	FALSE	canonical	0	0	junction_5	61.4912477814445	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATCGTTTATCTGTTTA	NA	False	NA	3	True	ATTAAA	-26	NA	52632190	52583364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52584950_52590016_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52604857_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.15	chr2	-	3236	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-211	1692	-130	-1692	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTATCGTTTATCTGT	NA	False	NA	0	True	ATTAAA	-23	NA	52632423	52583367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.16	chr2	-	3008	14	NNC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	-16	-1697	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	57.9378365095581	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAATCTTATCGTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	52632228	52583372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604857_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.17	chr2	-	4811	1	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	43983	-1699	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGAAATCTTATCGTT	NA	False	NA	-7	True	ATTAAA	-16	NA	52588185	52583374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52583400_52588200
ES.19042.18	chr2	-	1803	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	7	2907	-3	-2907	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCATAAAAGGTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	52632205	52584582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.19	chr2	-	10369	13	NNC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	2	-2913	intron_retention	FALSE	canonical	0	0	junction_11	79.772941667098	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGAAGGCCATAAAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	52632190	52584588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52584950_52590016_52590184_52593113_52596466_52597929_52598018_52598154_52598238_52599607_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52629174_52629493_52632076
ES.19042.2	chr2	-	4232	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	-20	505	-20	-505	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGATAAATAGAGCTT	NA	False	NA	NA	False	NA	NA	NA	52632232	52582180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.20	chr2	-	1606	12	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	3	-2913	combination_of_known_splicesites	FALSE	canonical	3	10	junction_10	58.9839591585418	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGAAGGCCATAAAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	52632189	52584588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52610895_52610981_52632072
ES.19042.21	chr2	-	1869	15	NNC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	-2	-2913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.2699902256632	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGAAGGCCATAAAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	52632214	52584588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599015_52599079_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ES.19042.22	chr2	-	3943	1	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	31073	2256	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	52601095	52597152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52597200_52601100
ES.19042.23	chr2	-	1985	1	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	2	-20480	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	52632190	52630205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52630200_52632200
ES.19042.3	chr2	-	3982	12	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	6	-534	combination_of_known_splicesites	FALSE	canonical	3	10	junction_10	58.9839591585418	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAATGTGGCTGGTCTA	NA	False	NA	NA	False	AATAAA	-26	NA	52632186	52582209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52610895_52610981_52632072
ES.19042.4	chr2	-	5095	1	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	44861	-537	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	52587307	52582212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52582200_52587300
ES.19042.5	chr2	-	4475	15	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	3	-537	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	74.3939115898113	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	52632189	52582212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52629174_52629493_52632072
ES.19042.7	chr2	-	4274	13	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	-3	-542	intron_retention	FALSE	canonical	3	181	junction_4	18.7622182412777	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATTGTAAATGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	52632205	52582217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609990_52610895_52610981_52632072
ES.19042.8	chr2	-	3868	11	NIC	ENSMUSG00000055371.18	novel	4717	14	NA	NA	3	-542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	63.9793716755643	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATTGTAAATGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	52632165	52582217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52632072
ES.19043.1	chr2	+	180	1	Intergenic	novelGene_15800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTAAAGCTTCACTCT	NA	False	NA	NA	False	NA	NA	NA	52680869	52681049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52680900_52681000
ES.19044.1	chr2	+	227	1	Intergenic	novelGene_15801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTGCTTTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	52688618	52688845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52688600_52688800
ES.19045.1	chr2	-	177	1	Intergenic	novelGene_15802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	52693569	52693392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52693400_52693600
ES.19046.1	chr2	+	6278	27	NNC	ENSMUSG00000036053.18	novel	5508	27	NA	NA	-123	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	3.18023667758294	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGTCATATGTTCTAAT	5292	False	NA	16	True	AATAAA	-15	NA	52747748	53023815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364_52997678_52998263_52998305_52998397_52998471_53004123_53004249_53004866_53005070_53006851_53007087_53008198_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016989_53020423_53020518_53021851
ES.19046.10	chr2	+	2287	4	ISM	ENSMUSG00000036053.18	ENSMUST00000127122.9	5508	27	268151	-3	268143	3	3prime_fragment	FALSE	canonical	1	3	junction_3	3.55902608401044	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATATGTTCTAATCCTT	524	False	NA	20	True	AATAAA	-19	NA	53016022	53023819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_53016124_53016864_53016989_53020423_53020518_53021851
ES.19046.11	chr2	+	5574	2	NIC	ENSMUSG00000036053.18	novel	5508	27	NA	NA	269028	-1	intron_retention	FALSE	canonical	1	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGTCATATGTTCTAAT	1409	False	NA	16	True	AATAAA	-15	NA	53016907	53023815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53020518_53021851
ES.19046.2	chr2	+	5630	27	FSM	ENSMUSG00000036053.18	ENSMUST00000127122.9	5508	27	-116	-6	-116	6	multi-exon	FALSE	canonical	0	0	junction_1	3.34239399729237	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTTCTAATCCTTTGT	5299	False	NA	23	True	AATAAA	-22	NA	52747755	53023822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364_52997678_52998263_52998471_53004123_53004249_53004866_53005070_53006851_53007087_53008198_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016124_53016864_53016989_53020423_53020518_53021851
ES.19046.3	chr2	+	5633	28	NNC	ENSMUSG00000036053.18	novel	5508	27	NA	NA	-97	-2	intron_retention	TRUE	canonical	0	0	junction_1	3.28775422535884	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGGTCATATGTTCTAA	5318	False	NA	15	True	AATAAA	-14	NA	52747774	53023814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364_52997678_52998263_52998471_53004123_53004249_53004866_53005070_53006851_53007087_53008198_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016124_53016864_53016989_53017617_53017648_53020423_53020518_53021851
ES.19046.4	chr2	+	5527	27	FSM	ENSMUSG00000036053.18	ENSMUST00000049483.14	5461	27	-66	0	-66	0	multi-exon	FALSE	canonical	0	0	junction_1	3.33108898802687	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTCATATGTTCTAATC	5349	False	NA	17	True	AATAAA	-16	NA	52747805	53023816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_52748272_52904814_52904899_52926515_52926597_52932304_52932382_52941211_52941296_52944465_52944619_52958513_52958623_52962221_52962299_52963651_52963746_52987282_52987358_52991437_52991549_52993668_52993819_52995490_52995593_52997364_52997678_52998263_52998471_53004123_53004249_53004866_53005070_53006851_53007087_53008198_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016124_53016864_53016989_53020423_53020471_53021851
ES.19046.5	chr2	+	826	1	Intergenic	novelGene_15804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTAATATATTTTGAGGA	NA	False	NA	NA	False	TTTAAA	-38	NA	52759562	52760388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52759600_52760400
ES.19046.6	chr2	+	158	1	Intergenic	novelGene_15807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	52913722	52913880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52913700_52913900
ES.19046.7	chr2	+	3178	1	Intergenic	novelGene_15810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5360	False	NA	NA	False	NA	NA	NA	52988108	52991286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_52988100_52991300
ES.19046.8	chr2	+	4556	13	NNC	ENSMUSG00000036053.18	novel	3939	27	NA	NA	252772	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.17997873466148	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGGTCATATGTTCTAA	NA	False	NA	15	True	AATAAA	-14	NA	53000651	53023814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53001819_53004123_53004249_53004866_53005070_53006851_53007087_53008198_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016124_53016864_53016989_53020423_53020518_53021851
ES.19046.9	chr2	+	4259	13	NNC	ENSMUSG00000036053.18	novel	5461	27	NA	NA	256241	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.20565096031518	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGTCATATGTTCTAAT	NA	False	NA	16	True	AATAAA	-15	NA	53004120	53023815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53004249_53004866_53005070_53006851_53007087_53007411_53008268_53008375_53008457_53009971_53010102_53012499_53012664_53013483_53013586_53016024_53016124_53016864_53016989_53018728_53018855_53020423_53020471_53021851
ES.19047.1	chr2	-	3071	1	Intergenic	novelGene_15803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAGGAAAAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	52758246	52755175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52755200_52758200
ES.19048.1	chr2	-	4072	1	Intergenic	novelGene_15805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	52799349	52795277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52795300_52799300
ES.19049.1	chr2	-	175	1	Intergenic	novelGene_15806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACTA	NA	False	NA	NA	False	NA	NA	NA	52872258	52872083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52872100_52872300
ES.1905.1	chr1	+	227	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTGAGAGGC	4177	False	NA	NA	False	NA	NA	NA	171292252	171292479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171292300_171292500
ES.19050.1	chr2	-	169	1	Intergenic	novelGene_15808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTATTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	52954562	52954393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52954400_52954600
ES.19051.1	chr2	-	170	1	Intergenic	novelGene_15809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	52955450	52955280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_52955300_52955400
ES.19052.1	chr2	+	3262	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-676	-38	-314	38	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTCAGACACAAGGTAG	NA	False	NA	62	True	NA	NA	NA	53081423	53109270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.10	chr2	+	4207	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-9	-1650	-9	1650	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTCAGTCAATTTCT	NA	False	NA	NA	False	NA	NA	NA	53082090	53110882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.11	chr2	+	1587	3	NIC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	-8	771	combination_of_known_splicesites	TRUE	canonical	2	5	junction_1	256	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTTGAACTTGTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	53082091	53108317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53082535_53092930_53093064_53107306
ES.19052.12	chr2	+	1429	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-4	1123	-4	563	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTTTAAGATTAAGTAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	53082095	53108109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.13	chr2	+	1661	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	-4	-776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	219.364280364876	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAAGGGTTCTTGTTGT	NA	False	NA	9	True	AATATA	-21	NA	53082095	53108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306_53108011_53108125
ES.19052.14	chr2	+	1853	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	4	-774	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	247.51717112152	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGTTCTTGTTGTTA	NA	False	NA	11	True	AATATA	-23	NA	53082103	53108458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53104463_53104547_53107306
ES.19052.15	chr2	+	2208	3	NIC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	7	-279	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	256	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCCTACCCCCAACTCT	NA	False	NA	NA	False	AATATA	-24	NA	53082106	53108953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53082535_53092930_53093064_53107306
ES.19052.16	chr2	+	2657	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	253.348944146211	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTGTGTAATGGC	NA	False	NA	20	True	ATTAAA	-13	NA	53082121	53109228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53082665_53082801_53084295_53084350_53092930_53093064_53107306
ES.19052.17	chr2	+	1615	3	NIC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	24	-776	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	248	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAAGGGTTCTTGTTGT	NA	False	NA	9	True	AATATA	-21	NA	53082123	53108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53082535_53084295_53084350_53107306
ES.19052.18	chr2	+	2349	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	24	175	24	-175	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTAGTGTTTTTTTTTT	NA	False	NA	NA	False	AAAAAG	-14	NA	53082123	53109057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.19	chr2	+	2608	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	247.51717112152	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	25	True	ATTAAA	-18	NA	53082123	53109233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53104463_53104547_53107306
ES.19052.2	chr2	+	2486	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-655	717	-293	-717	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGTATGTAGAAAGTC	NA	False	NA	68	True	TTTAAA	-22	NA	53081444	53108515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.20	chr2	+	4288	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	24	-1764	24	1764	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGTTTGCCAATATT	NA	False	NA	NA	False	GATAAA	-23	NA	53082123	53110996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.21	chr2	+	1607	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	25	916	25	770	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATGTTTGAACTTGTT	NA	False	NA	NA	False	AGTAAA	-24	NA	53082124	53108316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.22	chr2	+	1348	4	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	25	563	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	238.580990208543	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTTTAAGATTAAGTAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	53082124	53108109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092982_53093064_53107306
ES.19052.23	chr2	+	2289	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	219.364280364876	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTGTGTAATGGCAA	NA	False	NA	22	True	ATTAAA	-15	NA	53082128	53109230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306_53107508_53107735
ES.19052.24	chr2	+	953	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	29	1566	29	120	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCCATTTTTTACTAAC	NA	False	NA	NA	False	AATACA	-24	NA	53082128	53107666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.25	chr2	+	3524	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	29	-1005	29	1005	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTTCAAGTAAACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	53082128	53110237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.26	chr2	+	2549	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	250.515967554964	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTGTGTAATGGC	NA	False	NA	20	True	ATTAAA	-13	NA	53082128	53109228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53098950_53098985_53107306
ES.19052.27	chr2	+	2149	3	NIC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	346	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	256	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	25	True	ATTAAA	-18	NA	53082445	53109233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53082535_53092930_53093064_53107306
ES.19052.28	chr2	+	5143	2	ISM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	7743	4	7743	-4	3prime_fragment	FALSE	canonical	3	517	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTGTGTAATGGC	NA	False	NA	20	True	ATTAAA	-13	NA	53089842	53109228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_53093064_53107306
ES.19052.29	chr2	+	1283	2	ISM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	10829	778	10829	-778	3prime_fragment	FALSE	canonical	3	517	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATCAAGGGTTCTTGTT	NA	False	NA	7	True	AATATA	-19	NA	53092928	53108454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_53093064_53107306
ES.19052.3	chr2	+	4089	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-655	-886	-293	886	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTGCAATAATGTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	53081444	53110118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.30	chr2	+	2071	1	NIC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	25058	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTGTGTAATGGC	3426	False	NA	20	True	ATTAAA	-13	NA	53107157	53109228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_53107200_53109200
ES.19052.4	chr2	+	1516	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	19	-953	19	-733	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTGCTTGCTATTT	NA	False	NA	52	True	TTTAAA	-6	NA	53081756	53108499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
ES.19052.5	chr2	+	2100	4	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	31	-771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.937520716241	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCTTGTTGTTATTA	NA	False	NA	14	True	AATATA	-26	NA	53081768	53108461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_53082535_53084295_53084350_53092938_53093064_53107306
ES.19052.6	chr2	+	1312	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	41	-771	41	771	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTTGAACTTGTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	53081778	53108317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
ES.19052.7	chr2	+	2225	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	44	-1687	44	1	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	False	NA	25	True	ATTAAA	-18	NA	53081781	53109233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
ES.19052.8	chr2	+	2987	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-14	-425	-14	425	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATATTCTCCTGACTC	NA	False	NA	NA	False	GATAAA	-18	NA	53082085	53109657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19052.9	chr2	+	3872	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	-12	-1312	-12	1312	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTTAATTGGCATATC	NA	False	NA	NA	False	AGTAAA	-20	NA	53082087	53110544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ES.19053.1	chr2	-	7708	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCATCTGCCTCTGTAA	NA	False	NA	NA	False	AATAAA	-38	NA	53081262	53024412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.10	chr2	-	7403	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCGTTTCTCTTTAAGT	NA	False	NA	-16	True	ATTAAA	-15	NA	53081262	53024717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.100	chr2	-	4020	27	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	234.206064757578	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081236	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081034
ES.19053.101	chr2	-	3659	23	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	146.933792084048	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081218	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049683_53067360_53067446_53079980_53080113_53081034
ES.19053.102	chr2	-	3816	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	199.720228319517	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTAGTCTTTATTTCTAC	NA	False	NA	-3	True	ATTAAA	-16	NA	53081239	53028249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.103	chr2	-	3600	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	182.237303488086	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTAGTCTTTATTTCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	53081260	53028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53081160
ES.19053.104	chr2	-	3843	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-7	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	224.632941484547	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTAGTCTTTATTTCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	53081191	53028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078553_53079915_53080113_53081160
ES.19053.105	chr2	-	3827	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	191.569232480932	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTAGTCTTTATTTCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	53081247	53028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079882_53080113_53081160
ES.19053.106	chr2	-	3902	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	191.233662308705	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTAGTCTTTATTTCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	53081200	53028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.108	chr2	-	3684	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	215	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	179.691976997367	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTAGTCTTTATTTC	NA	False	NA	-6	True	ATTAAA	-13	NA	53080969	53028252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53080925
ES.19053.109	chr2	-	3572	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.745726425863	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGCACTAGTCTTTAT	NA	False	NA	-9	True	ATTAAA	-10	NA	53081215	53028255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.11	chr2	-	9550	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_21	157.773532991644	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCGTTTCTCTTTAAGT	NA	False	NA	-16	True	ATTAAA	-15	NA	53081285	53024717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067360_53067446_53079980_53080113_53081160
ES.19053.110	chr2	-	3481	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAGTAATAGTTGAAA	NA	False	NA	NA	False	AATATA	-37	NA	53081235	53028486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.112	chr2	-	3605	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTTGAGTAATAGTTG	NA	False	NA	NA	False	AATATA	-34	NA	53081236	53028489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.113	chr2	-	3032	23	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	21964	265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	220.979997037988	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACGTCTCTACTTTGTT	NA	False	NA	3	True	ATTAAA	-22	NA	53058148	53028918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046994_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53056726_53056855_53057947
ES.19053.114	chr2	-	3488	25	NNC	ENSMUSG00000061136.17	novel	3251	26	NA	NA	39	264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACGTCTCTACTTTGT	NA	False	NA	2	True	ATTAAA	-21	NA	53081675	53028919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.115	chr2	-	3202	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	2	261	at_least_one_novel_splicesite	FALSE	canonical	3	206	junction_9	102.895628672942	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGACGTCTCTACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	53081260	53028922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.116	chr2	-	3177	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	158.740611052189	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGACGTCTCTACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	53081239	53028922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.118	chr2	-	3352	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	184	261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGACGTCTCTACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	53081530	53028922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.12	chr2	-	6248	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-2	-1008	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAAGTCCTCTGTT	NA	False	NA	1	True	NA	NA	NA	53081239	53025723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.120	chr2	-	3107	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-7	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	191.855830566137	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCAGACGTCTCTACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	53081303	53028922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035240_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.121	chr2	-	2992	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-7	260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.745726425863	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCAGACGTCTCTACT	NA	False	NA	-2	True	ATTAAA	-17	NA	53081303	53028923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.122	chr2	-	3006	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	93	674	-4	260	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCAGACGTCTCTACT	NA	False	NA	-2	True	ATTAAA	-17	NA	53081203	53028923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.123	chr2	-	3183	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCAGACGTCTCTACT	NA	False	NA	-2	True	ATTAAA	-17	NA	53081236	53028923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.125	chr2	-	3092	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	16	259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGCAGACGTCTCTAC	NA	False	NA	-3	True	ATTAAA	-16	NA	53081168	53028924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.127	chr2	-	3366	24	NNC	ENSMUSG00000061136.17	novel	3251	26	NA	NA	23	258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	182.237303488086	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCTGCAGACGTCTCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	53081691	53028925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.128	chr2	-	3135	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	257	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	179.41850963599	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCTGCAGACGTCTCT	NA	False	NA	-5	True	ATTAAA	-14	NA	53081202	53028926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035385_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049564_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.129	chr2	-	1271	10	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-889	256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.809742045191	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGCTGCAGACGTCTC	NA	False	NA	-6	True	ATTAAA	-13	NA	53036210	53028927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030595_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105
ES.19053.13	chr2	-	6306	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	-1014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGTGTTTTAAGTCC	NA	False	NA	-5	True	NA	NA	NA	53081187	53025729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.130	chr2	-	2993	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	7	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	207.858438449784	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGCTGCAGACGTCTC	NA	False	NA	-6	True	ATTAAA	-13	NA	53081230	53028927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.131	chr2	-	3073	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	199.12509011244	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGCTGCAGACGTCTC	NA	False	NA	-6	True	ATTAAA	-13	NA	53081184	53028927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.133	chr2	-	3227	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	35	255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	179.178998769387	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATAGCTGCAGACGTCT	NA	False	NA	-7	True	ATTAAA	-12	NA	53081679	53028928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034_53081237_53081618
ES.19053.136	chr2	-	3009	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTCTGTATCAAGAAT	NA	False	NA	-105	True	TATAAA	-21	NA	53081187	53029026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.137	chr2	-	2958	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-3	157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTCTGTATCAAGAAT	NA	False	NA	-105	True	TATAAA	-21	NA	53081240	53029026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.138	chr2	-	2937	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	189.67790223751	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTTGATTCTGTAT	NA	False	NA	NA	False	TATAAA	-14	NA	53081236	53029033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031695_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.139	chr2	-	3037	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTTGATTCTGTAT	NA	False	NA	NA	False	TATAAA	-14	NA	53081212	53029033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.14	chr2	-	6405	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4	-1016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGTGTGTTTTAAGT	NA	False	NA	-7	True	NA	NA	NA	53081266	53025731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.140	chr2	-	2919	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-41	687	-3	10	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAGTATGATTTAAAG	NA	False	NA	-23	True	AATAAA	-16	NA	53081240	53029173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.141	chr2	-	2840	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	213.621332268105	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAGTATGATTTAAA	NA	False	NA	-24	True	AATAAA	-15	NA	53081202	53029174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
ES.19053.142	chr2	-	3253	25	NNC	ENSMUSG00000061136.17	novel	3251	26	NA	NA	19	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAGTATGATTTAAA	NA	False	NA	-24	True	AATAAA	-15	NA	53081695	53029174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.143	chr2	-	3276	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	120	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTATAGTATGATTTA	NA	False	NA	-26	True	AATAAA	-13	NA	53081594	53029176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.144	chr2	-	2893	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	182.290061897698	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTATAGTATGATT	NA	False	NA	-28	True	AATAAA	-11	NA	53081266	53029178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035297_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.145	chr2	-	2921	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	158.740611052189	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTATAGTATGATT	NA	False	NA	-28	True	AATAAA	-11	NA	53081239	53029178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.146	chr2	-	2936	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTATAGTATGATT	NA	False	NA	-28	True	AATAAA	-11	NA	53081244	53029178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.147	chr2	-	3067	26	NNC	ENSMUSG00000061136.17	novel	3251	26	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	200.043771210203	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTATAGTATGATT	NA	False	NA	-28	True	AATAAA	-11	NA	53081695	53029178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160_53081425_53081618
ES.19053.148	chr2	-	2776	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	173.749194555531	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081236	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53067333_53067446_53079980_53080113_53081160
ES.19053.149	chr2	-	2857	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	213.621332268105	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081236	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
ES.19053.15	chr2	-	6365	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	-1017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCTGTGTGTTTTAAG	NA	False	NA	-8	True	NA	NA	NA	53081239	53025732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.150	chr2	-	2697	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.745726425863	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081266	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.151	chr2	-	2766	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	191.003013174313	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081224	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036114_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.152	chr2	-	2863	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	186.169851508202	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081240	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.154	chr2	-	2866	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	199.657068944689	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGTTTATAGTATG	NA	False	NA	-31	True	AATAAA	-8	NA	53081202	53029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.155	chr2	-	2796	26	FSM	ENSMUSG00000061136.17	ENSMUST00000209364.3	3251	26	458	-3	6	3	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAAATATATGTTTATA	NA	False	NA	-36	True	AATAAA	-3	NA	53081256	53029186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.156	chr2	-	10082	1	NIC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4841	-891	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	742	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGTACCACTTCATAA	NA	False	NA	NA	False	AAAAAG	-8	NA	53040162	53030080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_53030100_53040200
ES.19053.157	chr2	-	3048	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	-921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	155.25307104226	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53081236	53030110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.158	chr2	-	2608	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	7	-1367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	171.375564538773	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCGGGACAGTGAAAAAGA	NA	False	NA	21	True	GATAAA	-10	NA	53081230	53030556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.159	chr2	-	1385	9	NNC	ENSMUSG00000061136.17	novel	2227	21	NA	NA	2	-2253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	217.229141691441	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCTGGTTGGTTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	53081260	53046290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.16	chr2	-	6326	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-8	-1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	161.98127035886	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTCTTTATCATCC	NA	False	NA	-21	True	NA	NA	NA	53081224	53025745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53067333_53067446_53079980_53080113_53081034
ES.19053.160	chr2	-	3525	2	Intergenic	novelGene_15811	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAAGAATCAGAGATAG	NA	False	NA	NA	False	TATAAA	-41	NA	53056721	53053135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_53056365_53056425
ES.19053.161	chr2	-	9723	2	NNC	ENSMUSG00000061136.17	novel	3065	5	NA	NA	17162	-9127	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	53062950	53053164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53056376_53056438
ES.19053.17	chr2	-	6162	23	NIC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	-1030	combination_of_known_splicesites	FALSE	canonical	1	3	junction_21	145.94922274488	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTCTTTATCATCC	NA	False	NA	-21	True	NA	NA	NA	53081184	53025745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53079980_53080113_53081034
ES.19053.18	chr2	-	6022	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-8	-1030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	183.824318201354	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTCTTTATCATCC	NA	False	NA	-21	True	NA	NA	NA	53081224	53025745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067389_53081160
ES.19053.19	chr2	-	6180	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-7	-1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	170.328435798802	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTCTTTATCATCC	NA	False	NA	-21	True	NA	NA	NA	53081191	53025745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.2	chr2	-	7698	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCATCTGCCTCT	NA	False	NA	NA	False	AATAAA	-34	NA	53081266	53024416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.21	chr2	-	6175	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	2	-1228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTTCCTTTGGGA	NA	False	NA	NA	False	TATAAA	-43	NA	53081260	53025943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.22	chr2	-	6115	26	FSM	ENSMUSG00000061136.17	ENSMUST00000076313.14	7374	26	4	1255	4	-1255	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAGAAAACAAACTAGA	NA	False	NA	NA	False	TATAAA	-16	NA	53081233	53025970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.23	chr2	-	5674	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	-1681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAGATTTTTCATTTC	NA	False	NA	NA	False	AATGAA	-14	NA	53081212	53026396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.24	chr2	-	5453	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-2	1719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACCTCAGATACTTGA	NA	False	NA	NA	False	AATATA	-17	NA	53081239	53026530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.25	chr2	-	5218	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-15	-1638	2	1401	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTCTTGTTTTGATTA	NA	False	NA	3	True	TATAAA	-21	NA	53081214	53026848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.26	chr2	-	5310	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-6	1399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATTGTCTTGTTTTGAT	NA	False	NA	1	True	TATAAA	-19	NA	53081302	53026850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.27	chr2	-	5392	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	10	1399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	188.530078236869	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATTGTCTTGTTTTGAT	NA	False	NA	1	True	TATAAA	-19	NA	53081704	53026850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160_53081425_53081618
ES.19053.28	chr2	-	5265	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	6	1398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	158.740611052189	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATTGTCTTGTTTTGA	NA	False	NA	0	True	TATAAA	-18	NA	53081256	53026851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.29	chr2	-	4943	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	4	1398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.490590268229	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATTGTCTTGTTTTGA	NA	False	NA	0	True	TATAAA	-18	NA	53081212	53026851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030601_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042973_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53081160
ES.19053.3	chr2	-	7669	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-5	293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAAAAGCATTCATCT	NA	False	NA	NA	False	AATAAA	-28	NA	53081221	53024422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.30	chr2	-	5153	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	2	1398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATTGTCTTGTTTTGA	NA	False	NA	0	True	TATAAA	-18	NA	53081260	53026851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.31	chr2	-	5170	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	4	1398	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	203.152955341262	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATTGTCTTGTTTTGA	NA	False	NA	0	True	TATAAA	-18	NA	53081212	53026851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079915_53080113_53081160
ES.19053.32	chr2	-	5202	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-3	1398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	182.130176087508	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTATTGTCTTGTTTTGA	NA	False	NA	0	True	TATAAA	-18	NA	53081202	53026851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079987_53080113_53081034
ES.19053.33	chr2	-	5284	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4	1397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTATTGTCTTGTTTTG	NA	False	NA	-1	True	TATAAA	-17	NA	53081266	53026852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.34	chr2	-	5178	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	13	1397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	155.20077319395	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTATTGTCTTGTTTTG	NA	False	NA	-1	True	TATAAA	-17	NA	53081171	53026852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067441_53079980_53080113_53081034
ES.19053.37	chr2	-	5134	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-2	1397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	154.370405914548	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTATTGTCTTGTTTTG	NA	False	NA	-1	True	TATAAA	-17	NA	53081264	53026852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.39	chr2	-	5208	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	1394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	158.740611052189	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081212	53026855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066393_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.4	chr2	-	7390	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTCTCTTTAAGTGTCT	NA	False	NA	-12	True	ATTAAA	-19	NA	53081233	53024713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.43	chr2	-	5212	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	1394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	191.569232480932	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081237	53026855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079882_53080113_53081160
ES.19053.44	chr2	-	5022	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	195.745726425863	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081266	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.46	chr2	-	5241	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	11	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	213.621332268105	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081285	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
ES.19053.47	chr2	-	5101	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	203.442009038612	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081266	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035297_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.48	chr2	-	5096	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-6	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	185.357336393814	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081190	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.49	chr2	-	5085	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	199.657068944689	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081236	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046858_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.5	chr2	-	7267	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTCTCTTTAAGTGTCT	NA	False	NA	-12	True	ATTAAA	-19	NA	53081236	53024713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.50	chr2	-	5061	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-2	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	195.98746150242	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081239	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.51	chr2	-	5207	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	1393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACTCTATTGTCTTGT	NA	False	NA	-5	True	TATAAA	-13	NA	53081215	53026856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.52	chr2	-	4942	23	NIC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-3	1392	combination_of_known_splicesites	FALSE	canonical	1	3	junction_21	159.977070929369	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTCTATTGTCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	53081202	53026857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53079980_53080113_53081160
ES.19053.54	chr2	-	5120	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-8	1390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	170.328435798802	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTACTCTATTGTCT	NA	False	NA	-8	True	TATAAA	-10	NA	53081245	53026859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.55	chr2	-	5212	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-8	1390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	161.98127035886	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTACTCTATTGTCT	NA	False	NA	-8	True	TATAAA	-10	NA	53081224	53026859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53067333_53067446_53079980_53080113_53081034
ES.19053.56	chr2	-	5189	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	1389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	143.779104886247	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTCTACTCTATTGTC	NA	False	NA	-9	True	TATAAA	-9	NA	53081212	53026860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53067331_53067446_53079980_53080113_53081034
ES.19053.57	chr2	-	5068	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	227	1387	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_25	151.623554898307	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTCTACTCTATTG	NA	False	NA	-11	True	TATAAA	-7	NA	53080957	53026862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53080925
ES.19053.58	chr2	-	4868	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	6	1129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTTTTGTTGTTGTTT	NA	False	NA	NA	False	CATAAA	-20	NA	53081256	53027120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.59	chr2	-	4950	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	4	1129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTTTTGTTGTTGTTT	NA	False	NA	NA	False	CATAAA	-20	NA	53081212	53027120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.6	chr2	-	7286	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	170.328435798802	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTTCTCTTTAAGTGTC	NA	False	NA	-13	True	ATTAAA	-18	NA	53081266	53024714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.60	chr2	-	5043	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-7	1129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	158.740611052189	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTTTTGTTGTTGTTT	NA	False	NA	NA	False	CATAAA	-20	NA	53081303	53027120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.61	chr2	-	4934	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	1096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGACATAAAGTGATT	NA	False	NA	74	True	ATTAAA	-36	NA	53081239	53027153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.62	chr2	-	4876	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-6	999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGCTTCTTATAAT	NA	False	NA	-23	True	AATAAA	-35	NA	53081268	53027250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.63	chr2	-	4784	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-9	996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081305	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.64	chr2	-	4793	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-6	996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081302	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.65	chr2	-	4735	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	154.370405914548	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081266	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.66	chr2	-	6029	22	NIC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	2	996	intron_retention	FALSE	canonical	1	3	junction_20	149.382052912746	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081214	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53049329_53049569_53049691_53050787_53050899_53079980_53080113_53081034
ES.19053.67	chr2	-	4843	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-45	-1233	-7	996	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081244	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.68	chr2	-	4708	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	10	996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	170.328435798802	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTCTGTGCTTCTTAT	NA	False	NA	-26	True	AATAAA	-32	NA	53081227	53027253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.69	chr2	-	4880	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-4	993	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGATTTCTGTGCTTCT	NA	False	NA	-29	True	AATAAA	-29	NA	53081266	53027256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.7	chr2	-	7425	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.358742626097	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTTCTCTTTAAGTGTC	NA	False	NA	-13	True	ATTAAA	-18	NA	53081268	53024714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029296_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.70	chr2	-	4907	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-8	992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	178.680031340942	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATTTCTGTGCTTC	NA	False	NA	-30	True	AATAAA	-28	NA	53081224	53027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.71	chr2	-	4671	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	14903	992	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	250.254985276926	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATTTCTGTGCTTC	NA	False	NA	-30	True	AATAAA	-28	NA	53065209	53027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53045951_53046066_53046105_53046216_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142
ES.19053.72	chr2	-	4806	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATTTCTGTGCTTC	NA	False	NA	-30	True	AATAAA	-28	NA	53081215	53027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.73	chr2	-	4768	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATTTCTGTGCTTC	NA	False	NA	-30	True	AATAAA	-28	NA	53081186	53027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066393_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.74	chr2	-	4814	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-8	992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	161.98127035886	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGATTTCTGTGCTTC	NA	False	NA	-30	True	AATAAA	-28	NA	53081224	53027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53067333_53067446_53079980_53080113_53081034
ES.19053.75	chr2	-	4599	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	182.237303488086	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTCCTCAAAATAGATT	NA	False	NA	-40	True	AATAAA	-18	NA	53081266	53027267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.76	chr2	-	4667	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	2	982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	185.978483215886	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTCCTCAAAATAGATT	NA	False	NA	-40	True	AATAAA	-18	NA	53081214	53027267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.77	chr2	-	4736	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	981	at_least_one_novel_splicesite	FALSE	canonical	3	206	junction_9	120.929824278381	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGTCCTCAAAATAGAT	NA	False	NA	-41	True	AATAAA	-17	NA	53081266	53027268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.79	chr2	-	4584	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	2	967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	207.449905128916	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATGTTTTAGCATG	NA	False	NA	-55	True	AATAAA	-3	NA	53081260	53027282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.8	chr2	-	7282	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGTTTCTCTTTAAGTG	NA	False	NA	-15	True	ATTAAA	-16	NA	53081266	53024716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.80	chr2	-	4783	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	222.643916602273	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATGTTTTAGCATG	NA	False	NA	-55	True	AATAAA	-3	NA	53081241	53027282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
ES.19053.81	chr2	-	4756	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-8	967	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	188.179726857066	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATGTTTTAGCATG	NA	False	NA	-55	True	AATAAA	-3	NA	53081224	53027282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.82	chr2	-	3876	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-1	96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.370405914548	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTAGCTACAGTACTT	NA	False	NA	1	True	AATAAA	-26	NA	53081297	53028153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.83	chr2	-	3681	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	38	95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	139.708148401153	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTAGCTACAGTACT	NA	False	NA	0	True	AATAAA	-25	NA	53080074	53028154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066393_53066429_53067364_53067446_53079980
ES.19053.84	chr2	-	3932	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.838929869077	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATGGTAGCTACAGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	53081239	53028155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.85	chr2	-	3829	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	0	94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.56656353312	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATGGTAGCTACAGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	53081262	53028155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030595_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.86	chr2	-	3878	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	7	94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	170.328435798802	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATGGTAGCTACAGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	53081289	53028155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.87	chr2	-	3971	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-6	94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	140.838929869077	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATGGTAGCTACAGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	53081268	53028155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.88	chr2	-	3921	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-25	-331	-8	94	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATGGTAGCTACAGTAC	NA	False	NA	-1	True	AATAAA	-24	NA	53081224	53028155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.89	chr2	-	4053	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-191	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	154.370405914548	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATGGTAGCTACAGTA	NA	False	NA	-2	True	AATAAA	-23	NA	53081487	53028156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.90	chr2	-	3844	25	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	170.328435798802	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATGGTAGCTACAGTA	NA	False	NA	-2	True	AATAAA	-23	NA	53081266	53028156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066384_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.92	chr2	-	3814	24	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	186.169851508202	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTTTATTTCTACATA	NA	False	NA	0	True	ATTAAA	-19	NA	53081256	53028246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.93	chr2	-	3778	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	213.621332268105	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTTTATTTCTACATA	NA	False	NA	0	True	ATTAAA	-19	NA	53081212	53028246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
ES.19053.94	chr2	-	3779	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	188.179726857066	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTCTTTATTTCTACAT	NA	False	NA	-1	True	ATTAAA	-18	NA	53081212	53028247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065142_53065248_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.95	chr2	-	3868	25	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	158.740611052189	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081246	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.96	chr2	-	3618	24	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	182.237303488086	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081266	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53081160
ES.19053.97	chr2	-	4073	27	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	230.630522415882	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081239	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53045951_53046066_53046105_53046216_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53079980_53080113_53081034
ES.19053.98	chr2	-	3657	25	NIC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	152.640457857673	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081266	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ES.19053.99	chr2	-	3926	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	206.209431404095	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTCTTTATTTCTACA	NA	False	NA	-2	True	ATTAAA	-17	NA	53081236	53028248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53066374_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081034
ES.19054.1	chr2	-	2517	1	FSM	ENSMUSG00000083287.5	ENSMUST00000121574.2	684	1	-52	-1781	-52	1781	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATCTACCATGATCAGG	NA	False	NA	NA	False	AATAAA	-40	NA	53586868	53584351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53584400_53586900
ES.19055.1	chr2	+	178	1	Intergenic	novelGene_15812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	53735514	53735692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_53735500_53735700
ES.19056.1	chr2	+	177	1	Intergenic	novelGene_15813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTCAAACATGA	NA	False	NA	NA	False	NA	NA	NA	53860479	53860656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_53860500_53860700
ES.19057.1	chr2	-	1338	1	FSM	ENSMUSG00000075334.3	ENSMUST00000100089.3	1460	1	112	10	112	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGGCTTCCTGGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	53975452	53974114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_53974100_53975500
ES.19058.1	chr2	+	1447	5	NNC	ENSMUSG00000060988.13	novel	7531	13	NA	NA	-95	-166233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATTGTGTCATTATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	54326233	54456912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_54326742_54367659_54367731_54406453_54406694_54454916_54454990_54456357
ES.19058.2	chr2	+	1431	3	ISM	ENSMUSG00000060988.13	ENSMUST00000112635.8	7531	13	-8	600859	-8	-215683	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAAATGTTTGAATCT	NA	False	NA	NA	False	AATAAA	-18	NA	54326390	54407462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_54326742_54367659_54367731_54406453
ES.19059.1	chr2	+	175	1	Intergenic	novelGene_15814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	55083815	55083990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_55083800_55084000
ES.1906.1	chr1	-	173	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAAGGGGGGGG	950	False	NA	NA	False	NA	NA	NA	171294024	171293851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171293900_171294000
ES.19060.1	chr2	+	1908	2	FSM	ENSMUSG00000026824.12	ENSMUST00000112632.2	4068	2	-56	2216	-47	399	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTATTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-19	NA	55327120	55485936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_55327915_55484822
ES.19061.1	chr2	-	4220	1	Intergenic	novelGene_15815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	55958988	55954768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_55954800_55959000
ES.19062.1	chr2	-	2414	3	Antisense	novelGene_ENSMUSG00000098437.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTTCTTATTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	56799122	56664636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_56666787_56668668_56668850_56799039
ES.19062.2	chr2	-	2205	3	Antisense	novelGene_ENSMUSG00000098437.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTTTAAGGAACCCAA	NA	False	NA	NA	False	AATAAA	-25	NA	56799124	56664847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_56666787_56668668_56668850_56799039
ES.19062.3	chr2	-	2255	3	Antisense	novelGene_ENSMUSG00000098437.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTTGACTTTTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	56799138	56664855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_56666807_56668644_56668850_56799039
ES.19062.4	chr2	-	4657	3	Intergenic	novelGene_15816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACATTTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-28	NA	56753419	56718694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_56722443_56746861_56747003_56752651
ES.19063.1	chr2	+	166	1	Intergenic	novelGene_15817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	56853128	56853294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_56853100_56853300
ES.19064.1	chr2	+	176	1	Intergenic	novelGene_15818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	56971873	56972049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_56971900_56972000
ES.19065.1	chr2	-	3435	8	NIC	ENSMUSG00000026826.14	novel	3422	8	NA	NA	-136	-2	combination_of_known_junctions	TRUE	canonical	1	2	junction_5	1.27775312999988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTTATTTCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	57014151	56996843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_56998425_56998572_56998631_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
ES.19065.2	chr2	-	3556	8	FSM	ENSMUSG00000026826.14	ENSMUST00000112629.8	3422	8	-137	3	-137	-3	multi-exon	FALSE	canonical	1	2	junction_5	1.27775312999988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGTCTTATTTCTGG	NA	False	NA	NA	False	AATAAA	-16	NA	57014152	56996844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
ES.19065.3	chr2	-	3484	8	FSM	ENSMUSG00000026826.14	ENSMUST00000028166.9	3568	8	77	7	77	-7	multi-exon	FALSE	canonical	1	1	junction_7	1.49829835452879	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAACTCTGTCTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	57004973	56996848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57004729
ES.19065.4	chr2	-	2768	8	NIC	ENSMUSG00000026826.14	novel	3422	8	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	1.27775312999988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTACATAAAAAGGGGAC	NA	False	NA	NA	False	AAAAAG	-32	NA	57014151	56997510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_56998425_56998572_56998631_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
ES.19065.5	chr2	-	805	1	Genic_Genomic	ENSMUSG00000026826.14	novel	NA	NA	NA	NA	-137	-10346	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGAAGGCTTCCATTC	NA	False	NA	NA	False	AATAAA	-21	NA	57014152	57013347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_57013300_57014200
ES.19066.1	chr2	-	2752	4	NNC	ENSMUSG00000084938.2	novel	1097	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGGGTTGTCTCTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	57071749	57017490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_57018390_57018994_57019093_57035123_57036796_57071666
ES.19067.1	chr2	-	178	1	Intergenic	novelGene_15819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATAGACTGTTG	4462	False	NA	NA	False	NA	NA	NA	57119677	57119499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_57119500_57119700
ES.19068.1	chr2	+	5790	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-41	-4	2	4	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	57127648	57260735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.10	chr2	+	3657	18	NNC	ENSMUSG00000026827.13	novel	5759	18	NA	NA	-3	651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.6026098729717	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCCGTTAACTTTAATT	NA	False	NA	NA	False	AATAAA	-14	NA	57128305	57258516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128580_57154167_57154332_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.11	chr2	+	3866	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	16	1738	16	1128	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGTGTCTCTCTGCC	NA	False	NA	NA	False	CATAAA	-30	NA	57128409	57258993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.12	chr2	+	2931	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	26	2663	26	203	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGCAACTCTGGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57128419	57258068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.13	chr2	+	4763	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	33	824	33	-824	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTATTTGTTGATTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	57128426	57259907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.14	chr2	+	3373	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	33	2214	33	652	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTTAACTTTAATTA	NA	False	NA	NA	False	AATAAA	-15	NA	57128426	57258517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.15	chr2	+	5563	17	NNC	ENSMUSG00000026827.13	novel	5620	17	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	52.7934877020831	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTTGTTGGCATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	57128436	57260729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245783_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.16	chr2	+	5069	14	NIC	ENSMUSG00000026827.13	novel	5620	17	NA	NA	45	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	57.4127586174973	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTTGTTGGCATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	57128438	57260729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.17	chr2	+	2522	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	45	3053	45	-187	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAAGATGTTGGTGT	NA	False	NA	113	True	AAAACA	-5	NA	57128438	57257678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.19	chr2	+	4194	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	61	1365	61	-1365	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGGCAGAAAAAGCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	57128454	57259366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.2	chr2	+	4048	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-38	1735	5	1131	multi-exon	FALSE	canonical	3	41	junction_1	44.6148447828747	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTCTCTGCCTCA	NA	False	NA	NA	False	CATAAA	-33	NA	57127651	57258996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.22	chr2	+	5545	17	NNC	ENSMUSG00000026827.13	novel	5620	17	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	52.7934877020831	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTTGTTGGCATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	57128457	57260729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245598_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.23	chr2	+	3492	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	64	2064	64	802	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACATCAGACATATACG	NA	False	NA	NA	False	NA	NA	NA	57128457	57258667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.24	chr2	+	4530	16	NNC	ENSMUSG00000026827.13	novel	5620	17	NA	NA	69	-828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.9817253027973	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTGGTATTTGTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	57128462	57259903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128575_57179934_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.25	chr2	+	5547	17	NNC	ENSMUSG00000026827.13	novel	5620	17	NA	NA	71	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.7763189674119	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	57128464	57260735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128580_57157990_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.26	chr2	+	2372	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	90	3158	90	-292	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCGTAGCTGCCTTTTT	NA	False	NA	8	True	NA	NA	NA	57128483	57257573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.27	chr2	+	5690	18	NNC	ENSMUSG00000026827.13	novel	5759	18	NA	NA	93	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.6026098729717	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTGTTGGCATTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	57128486	57260730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128580_57154167_57154332_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.28	chr2	+	5412	16	NNC	ENSMUSG00000026827.13	novel	2176	12	NA	NA	1379	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.9817253027973	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	57158767	57260731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57158856_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.29	chr2	+	1956	1	NIC	ENSMUSG00000026827.13	novel	5745	17	NA	NA	86710	-11811	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5626	False	NA	NA	False	NA	NA	NA	57244098	57246054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_57244100_57246100
ES.19068.3	chr2	+	4955	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-34	824	9	-824	multi-exon	FALSE	canonical	3	41	junction_1	44.6148447828747	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTATTTGTTGATTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	57127655	57259907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.30	chr2	+	4264	8	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	117076	-1	88081	1	3prime_fragment	FALSE	canonical	3	168	junction_1	19.551084316712	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGTTGGCATTTTGAT	6997	False	NA	NA	False	AATAAA	-16	NA	57245469	57260732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.31	chr2	+	3950	6	ISM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	118135	2	89140	-2	3prime_fragment	FALSE	canonical	3	172	junction_1	19.8232187093822	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTTGTTGGCATTTT	8056	False	NA	NA	False	AATAAA	-13	NA	57246528	57260729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.32	chr2	+	4895	1	Genic_Genomic	ENSMUSG00000026827.13	novel	NA	NA	NA	NA	99462	1014	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATACTGGCCTCAATAT	NA	False	NA	NA	False	NA	NA	NA	57256850	57261745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_57256800_57261700
ES.19068.33	chr2	+	3597	1	Genic_Genomic	ENSMUSG00000026827.13	novel	NA	NA	NA	NA	99747	1	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGTTGGCATTTTGAT	NA	False	NA	NA	False	AATAAA	-16	NA	57257135	57260732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_57257100_57260700
ES.19068.4	chr2	+	3559	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	-30	2216	13	650	multi-exon	FALSE	canonical	3	41	junction_1	44.6148447828747	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCCGTTAACTTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	57127659	57258515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.5	chr2	+	4664	15	NIC	ENSMUSG00000026827.13	novel	5745	17	NA	NA	14	-828	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	55.8050999790653	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTGGTATTTGTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	57127660	57259903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_57128001_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19068.7	chr2	+	3226	18	NNC	ENSMUSG00000026827.13	novel	5745	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	59.7199925372611	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	57127693	57260731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363_57257486_57260000
ES.19068.9	chr2	+	5853	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	-229	-4	-144	4	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGCATTTTGATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	57128164	57260735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ES.19069.1	chr2	-	969	2	NNC	ENSMUSG00000054181.12	novel	1541	2	NA	NA	-142	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCTGCTTGGAGAT	NA	False	NA	NA	False	AATAAA	-19	NA	57128662	57126244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_57126985_57128433
ES.19069.2	chr2	-	1334	2	FSM	ENSMUSG00000054181.12	ENSMUST00000156418.8	1541	2	172	35	172	-35	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	57128348	57126273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_57126985_57127725
ES.1907.1	chr1	-	180	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	171300703	171300523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171300500_171300700
ES.19070.1	chr2	-	6128	1	Antisense	novelGene_ENSMUSG00000026827.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCTAAATCACCTG	NA	False	NA	NA	False	NA	NA	NA	57136782	57130654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_57130700_57136800
ES.19071.1	chr2	-	170	1	Intergenic	novelGene_15820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACTCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	57164084	57163914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_57163900_57164100
ES.19072.1	chr2	-	3329	1	Intergenic	novelGene_15821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAACTAACAACAACAAC	6510	False	NA	NA	False	NA	NA	NA	57175245	57171916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_57171900_57175200
ES.19073.1	chr2	-	2973	1	Intergenic	novelGene_15822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-14	NA	57188800	57185827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_57185800_57188800
ES.19074.1	chr2	+	1326	1	Intergenic	novelGene_15823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	42	False	NA	NA	False	AAAACA	-34	NA	57265189	57266515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_57265200_57266500
ES.19075.1	chr2	+	3164	1	FSM	ENSMUSG00000053472.4	ENSMUST00000121169.2	513	1	-16	-2635	-16	2635	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	57998055	58001219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_57998100_58001200
ES.19076.1	chr2	+	2510	1	Intergenic	novelGene_15824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGTAAAGAAGACAGAAGA	NA	False	NA	NA	False	NA	NA	NA	58407507	58410017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_58407500_58410000
ES.19077.1	chr2	+	1764	1	Intergenic	novelGene_15825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAACAAACAAACAA	NA	False	NA	NA	False	AAGAAA	-19	NA	58437588	58439352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_58437600_58439400
ES.19078.1	chr2	-	3473	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	-366	-713	-366	-2	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTCCTTCTTTCTTT	NA	False	NA	0	True	AATAAA	-19	NA	58457535	58336447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
ES.19078.10	chr2	-	3073	12	NNC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.2405391584394	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58456869	58336452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_58337686_58338325_58338451_58348892_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427882_58456798
ES.19078.12	chr2	-	4989	1	NIC	ENSMUSG00000026836.16	novel	3293	13	NA	NA	8885	-24641	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTATCCATCCACCCA	NA	False	NA	NA	False	AAAAAG	-5	NA	58397399	58392410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_58392400_58397400
ES.19078.2	chr2	-	3730	12	FSM	ENSMUSG00000026836.16	ENSMUST00000112601.9	3050	12	-677	-3	-348	3	multi-exon	FALSE	canonical	3	10	junction_10	14.1281034036818	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	58457517	58336449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
ES.19078.3	chr2	-	2869	11	NNC	ENSMUSG00000026836.16	novel	2394	11	NA	NA	798	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.5581889726703	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	58456040	58336449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58455905
ES.19078.4	chr2	-	3350	12	NNC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-58	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.8265286572272	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	58457227	58336449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369766_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
ES.19078.5	chr2	-	2550	9	NNC	ENSMUSG00000026836.16	novel	2891	10	NA	NA	36570	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.9207193386246	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	False	NA	-2	True	AATAAA	-17	NA	58369714	58336449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58363851_58364064_58364184_58364285_58367616_58367829_58369676
ES.19078.6	chr2	-	3679	13	FSM	ENSMUSG00000026836.16	ENSMUST00000090935.9	3293	13	-386	0	-55	0	multi-exon	FALSE	canonical	0	0	junction_9	20.684636005177	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457224	58336452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58397288_58397534_58406035_58406313_58427789_58427886_58456798
ES.19078.7	chr2	-	3294	12	NNC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.1581664345402	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457229	58336452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_58337686_58338325_58338457_58345649_58345782_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
ES.19078.8	chr2	-	5290	11	NIC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-63	0	intron_retention	FALSE	canonical	3	10	junction_9	14.1580365870413	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457232	58336452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
ES.19078.9	chr2	-	3395	10	NIC	ENSMUSG00000026836.16	novel	3050	12	NA	NA	-389	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.4065405615529	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58457558	58336452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58456798
ES.19079.1	chr2	-	3069	1	Intergenic	novelGene_15826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATTAAGAGAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58479404	58476335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_58476300_58479400
ES.1908.1	chr1	+	1206	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	48	19	48	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATAAAACAAGAATTGA	1455	False	NA	NA	False	NA	NA	NA	171331093	171332299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171331100_171332300
ES.1908.2	chr1	+	1039	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	101	133	101	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAGAAAAAG	21	False	NA	NA	False	AATAAA	-23	NA	171331146	171332185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171331100_171332200
ES.19080.1	chr2	-	158	1	Intergenic	novelGene_15827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	58507129	58506971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_58507000_58507100
ES.19081.1	chr2	-	176	1	Intergenic	novelGene_15828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAATAG	NA	False	NA	NA	False	NA	NA	NA	58514254	58514078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_58514100_58514300
ES.19082.1	chr2	-	650	4	Antisense	novelGene_ENSMUSG00000026839.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGTAAAAAGAA	4718	False	NA	NA	False	NA	NA	NA	58562886	58551532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_58551828_58562027_58562080_58562221_58562322_58562683
ES.19082.2	chr2	-	5218	2	Antisense	novelGene_ENSMUSG00000026839.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTTTTCTATGACG	4919	False	NA	NA	False	NA	NA	NA	58562685	58557325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_58562080_58562221
ES.19083.1	chr2	+	4470	23	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.1985503977661	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991157	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991190_58991362_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.10	chr2	+	4446	21	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.5960934519313	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991217	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.11	chr2	+	4509	22	NIC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	24.2731993897957	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991219	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.12	chr2	+	4574	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.1264619826541	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991223	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.13	chr2	+	4490	21	NIC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	46	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	26.4384190147596	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGAATGTGTTCTT	NA	False	NA	13	True	AATAAA	-13	NA	58991271	59185541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59096731_59096845_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.15	chr2	+	4610	23	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.5296245250278	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991334	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59143653_59143791_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.16	chr2	+	4255	20	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.3963796711682	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991342	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59184546
ES.19083.17	chr2	+	4345	21	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.2397999199677	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991343	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.18	chr2	+	2374	13	NIC	ENSMUSG00000026991.21	novel	4378	22	NA	NA	-7	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.4564050911571	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACGCCACAAGAGGACC	NA	False	NA	NA	False	NA	NA	NA	58991344	59169232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062
ES.19083.19	chr2	+	4335	21	NIC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	26.2207456034339	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGTGTTCTTG	NA	False	NA	14	True	AATAAA	-14	NA	58991348	59185542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59096731_59096845_59135409_59135542_59135648_59135837_59138433_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.2	chr2	+	4642	22	FSM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	-30	2	-30	-1	multi-exon	FALSE	canonical	0	0	junction_9	23.3372202787765	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991163	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.21	chr2	+	4211	20	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	24.9121447982456	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991352	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.22	chr2	+	4212	20	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	26.4694461397924	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991353	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59096731_59096845_59135409_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.23	chr2	+	4368	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.0113806295801	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991354	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.24	chr2	+	4626	21	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8219337933221	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991370	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59017326_59017768_59045021_59045159_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.25	chr2	+	4300	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	183	1	-10	-1	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991376	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.26	chr2	+	4273	21	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5083623649246	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGAATGTGTTCTT	NA	False	NA	13	True	AATAAA	-13	NA	58991388	59185541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59137580_59137709_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.28	chr2	+	4123	21	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	27.9894623028025	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991403	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135479_59135536_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142262_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175336_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.29	chr2	+	3812	21	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	24.9861961890961	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991412	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135487_59138690_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.3	chr2	+	4437	20	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.9470062743032	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTCTTGCAGTTCTTC	NA	False	NA	23	True	AATAAA	-23	NA	58991163	59185551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59184546
ES.19083.30	chr2	+	4593	23	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.3381146058661	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991413	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59179904_59180110_59180837_59180967_59182605_59182680_59184546
ES.19083.32	chr2	+	4953	22	NIC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	256	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.5800730267609	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	58991642	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58992342_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.33	chr2	+	4777	22	NIC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	-371	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.7279987646088	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991899	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58992342_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.34	chr2	+	4569	22	NNC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	9316	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.6471700849667	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	59001586	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59001825_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.35	chr2	+	4098	20	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	13927	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.6863674676707	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59045044	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.37	chr2	+	4158	20	NIC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	13957	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	26.108021925536	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGAATGTGTTCTT	NA	False	NA	13	True	AATAAA	-13	NA	59045074	59185541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59045159_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.38	chr2	+	4033	10	ISM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	53902	30293	13978	-13962	internal_fragment	FALSE	canonical	0	0	junction_8	13.7553581030524	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGATTCTTGTGTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	59045095	59155255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845
ES.19083.39	chr2	+	4395	21	NNC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	-2479	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8143103873551	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	59057613	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59057812_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.4	chr2	+	6882	20	NIC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_1	26.3370440481971	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991163	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59180967_59182605_59182680_59184546
ES.19083.41	chr2	+	4467	20	NIC	ENSMUSG00000026991.21	novel	4222	21	NA	NA	-294	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	25.1166806212398	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59059798	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59060199_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.42	chr2	+	4146	21	NNC	ENSMUSG00000026991.21	novel	4222	21	NA	NA	-294	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	26.9761005336205	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	59059798	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59060199_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546_59185093_59185334
ES.19083.43	chr2	+	4498	21	FSM	ENSMUSG00000026991.21	ENSMUST00000112577.8	4222	21	-280	4	-280	-3	multi-exon	FALSE	canonical	0	0	junction_8	25.796123739818	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	59059812	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59060199_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138433_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.44	chr2	+	4560	21	NNC	ENSMUSG00000026991.21	novel	4222	21	NA	NA	-267	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.741867922791	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59059825	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59060199_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.45	chr2	+	3989	18	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.5098448052761	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	59096730	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142257_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59184546
ES.19083.46	chr2	+	3933	17	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	221	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.5660144283383	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	59096748	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59096845_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59184546
ES.19083.48	chr2	+	4051	18	ISM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	144213	2	-17553	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	23.8389928028571	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59135406	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.49	chr2	+	3637	7	NIC	ENSMUSG00000026991.21	novel	2344	13	NA	NA	-17448	-13968	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.2847842025366	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATAGCATGATTCTTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	59135511	59155249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59135542_59135648_59135837_59138428_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845
ES.19083.5	chr2	+	4249	21	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.8531912923724	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991163	59185548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991214_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.50	chr2	+	3917	17	ISM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	144454	2	-17312	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	23.6587061142405	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59135647	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.51	chr2	+	5097	11	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	-17182	-3096	intron_retention	FALSE	non_canonical	0	0	junction_4	22.4100423917493	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCTCTGAGGTTAC	NA	False	NA	NA	False	NA	NA	NA	59135777	59175504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59135837_59138351_59138902_59140445_59140635_59142040_59142257_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436
ES.19083.53	chr2	+	3324	1	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	-16848	854	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59136111	59139435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59136100_59139400
ES.19083.55	chr2	+	904	5	ISM	ENSMUSG00000026991.21	ENSMUST00000183359.8	4122	22	147456	32179	-14279	14408	internal_fragment	FALSE	canonical	0	0	junction_3	21.435951110226	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAATCCCTGCCTTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	59138680	59152989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845
ES.19083.57	chr2	+	4223	13	ISM	ENSMUSG00000026991.21	ENSMUST00000112577.8	4222	21	87307	4	-5560	-3	3prime_fragment	FALSE	canonical	1	21	junction_8	19.9393176635734	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTGTTCTTGCAG	NA	False	NA	17	True	AATAAA	-17	NA	59147399	59185545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.58	chr2	+	2637	12	ISM	ENSMUSG00000026991.21	ENSMUST00000112577.8	4222	21	92751	3	-116	-2	3prime_fragment	FALSE	canonical	1	21	junction_7	20.751580642774	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGTGTTCTTGCAGT	NA	False	NA	18	True	AATAAA	-18	NA	59152843	59185546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ES.19083.59	chr2	+	1396	4	NIC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	2599	-7	combination_of_known_splicesites	FALSE	canonical	1	11	junction_3	35.1220095603249	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGAATGTGTTCTT	NA	False	NA	13	True	AATAAA	-13	NA	59175139	59185541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59175338_59178063_59178149_59178267_59178386_59184546
ES.19083.6	chr2	+	4341	19	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.0052819895887	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	58991187	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_58991473_59045021_59045159_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.60	chr2	+	5576	3	NIC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	3925	-1	intron_retention	FALSE	canonical	3	53	junction_1	20	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59176465	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59180967_59182605_59182680_59184546
ES.19083.61	chr2	+	5581	4	NNC	ENSMUSG00000026991.21	novel	2505	12	NA	NA	5360	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	43.1508980207828	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTTCTTGCAGTT	NA	False	NA	19	True	AATAAA	-19	NA	59177900	59185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59178149_59178267_59178428_59178507_59182680_59184546
ES.19083.62	chr2	+	1109	3	NNC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	7532	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAATGTGTTCTTGCA	NA	False	NA	16	True	AATAAA	-16	NA	59180072	59185544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59180110_59182605_59182680_59184546
ES.19083.63	chr2	+	179	1	Intergenic	novelGene_15831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	59203264	59203443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59203300_59203400
ES.19083.7	chr2	+	4441	20	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.1503885455163	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991198	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59135409_59135543_59135648_59135837_59138351_59138902_59140445_59140635_59142040_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175336_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19083.8	chr2	+	4500	22	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	6	18371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.8780244346942	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAATGAGAAGATAAGT	NA	False	NA	NA	False	ATTAAA	-45	NA	58991199	59203923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546_59185548_59203900
ES.19083.9	chr2	+	4462	21	NNC	ENSMUSG00000026991.21	novel	4614	22	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.5301345287791	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991214	59185549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135536_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142262_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ES.19084.1	chr2	+	3833	2	Antisense	novelGene_ENSMUSG00000080982.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCAGGCTTGAACTTAA	NA	False	NA	NA	False	NA	NA	NA	59213391	59248523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_59214188_59245486
ES.19085.1	chr2	-	5146	1	Intergenic	novelGene_15829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCACTATCCAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58997711	58992565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_58992600_58997700
ES.19086.1	chr2	-	4436	1	Antisense	novelGene_ENSMUSG00000026991.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	59176445	59172009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_59172000_59176400
ES.19087.1	chr2	-	3620	1	Antisense	novelGene_ENSMUSG00000026991.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATCATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	59183096	59179476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_59179500_59183100
ES.19088.1	chr2	-	4975	1	Antisense	novelGene_ENSMUSG00000026991.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59188994	59184019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_59184000_59189000
ES.19088.2	chr2	-	2230	3	NNC	ENSMUSG00000087455.8	novel	1635	3	NA	NA	3363	27661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTTTATTATTATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	59213663	59185184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59186898_59201820_59202107_59213432
ES.19088.3	chr2	-	3768	1	Intergenic	novelGene_15830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTAGTTCTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	59202281	59198513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59198500_59202300
ES.19088.4	chr2	-	2298	1	NIC	ENSMUSG00000087455.8	novel	1635	3	NA	NA	1883	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTACATTTGTGATTG	NA	False	NA	NA	False	ATTAAA	-13	NA	59215143	59212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59212800_59215100
ES.19088.5	chr2	-	1575	2	ISM	ENSMUSG00000087455.8	ENSMUST00000137162.8	1635	3	1872	1	1872	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTACATTTGTGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	59215154	59212846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_59214299_59215031
ES.19088.6	chr2	-	1630	3	NNC	ENSMUSG00000087455.8	novel	1635	3	NA	NA	1298	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAACTACATTTGTGAT	NA	False	NA	NA	False	ATTAAA	-11	NA	59215728	59212847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59214299_59215012_59215155_59215691
ES.19089.1	chr2	-	490	1	FSM	ENSMUSG00000081157.2	ENSMUST00000118837.2	417	1	242	-315	242	315	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAGAAAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	59394786	59394296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_59394300_59394800
ES.1909.1	chr1	+	420	1	FSM	ENSMUSG00000059058.8	ENSMUST00000118448.2	195	1	-7	-218	-7	218	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATGAATAAAG	NA	False	NA	NA	False	AATAAA	-8	NA	171538648	171539068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171538600_171539100
ES.19090.1	chr2	+	178	1	Intergenic	novelGene_15832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	59414961	59415139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59415000_59415100
ES.19091.1	chr2	+	7561	27	NNC	ENSMUSG00000035168.17	novel	7246	26	NA	NA	-9360	105	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	34.5164612130873	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCACGGGTTTTATTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	59433025	59676166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59433215_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.10	chr2	+	7332	26	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	32.7975608849195	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442371	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.11	chr2	+	7505	27	NNC	ENSMUSG00000035168.17	novel	7873	27	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.4653902203466	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442375	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529693_59529772_59555004_59555194_59588808_59588914_59601475_59601661_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.12	chr2	+	7699	28	NNC	ENSMUSG00000035168.17	novel	7873	27	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.515966048258	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442377	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59443460_59443711_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.13	chr2	+	5749	18	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	-3	25714	-3	-1378	5prime_fragment	FALSE	canonical	3	118	junction_5	18.5569356735345	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGTATTTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	59442382	59650347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828
ES.19091.14	chr2	+	7370	26	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.8966786898508	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442385	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601661_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.15	chr2	+	5931	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	0	1491	0	-1489	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCACCTCTTGGGTGGA	NA	False	NA	23	True	AATAAA	-19	NA	59442385	59674570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.16	chr2	+	7789	30	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.6350885490798	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGGTTGGCATTCAT	NA	False	NA	9	True	AATAAA	-11	NA	59442385	59676057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59511665_59511833_59529691_59529772_59529999_59530111_59555004_59555194_59575289_59575383_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.17	chr2	+	7552	28	NNC	ENSMUSG00000035168.17	novel	7873	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	54.9812039213083	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442385	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59529999_59530111_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638032_59645659_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.2	chr2	+	224	1	Intergenic	novelGene_15833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTTCTCTTACATCTT	NA	False	NA	NA	False	AAGAAA	-42	NA	59440566	59440790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59440600_59440800
ES.19091.20	chr2	+	7238	25	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.5404454655381	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442385	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.22	chr2	+	7427	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	49.6389478930506	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTTGGCATTCATTGC	NA	False	NA	12	True	AATAAA	-14	NA	59442386	59676060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59529691_59529772_59529999_59530111_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.23	chr2	+	7355	27	NNC	ENSMUSG00000035168.17	novel	7873	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	43.2508165945416	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442387	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645745_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.24	chr2	+	7880	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.6668847664206	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTCTTACTTGAAGT	NA	False	NA	NA	False	AATAGA	-22	NA	59442388	59676468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601661_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.26	chr2	+	7500	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.5164612130873	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442389	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477028_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.28	chr2	+	3672	19	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	4	-1380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	38.9237938592201	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTGTATTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	59442391	59650345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650080
ES.19091.29	chr2	+	7337	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.2191207492547	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442391	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645822_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.3	chr2	+	7496	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	-73	-1	-73	1	multi-exon	TRUE	canonical	3	118	junction_5	18.3464360565297	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGCATTCATTGCTC	NA	False	NA	14	True	AATAAA	-16	NA	59442312	59676062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.30	chr2	+	5785	18	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	4	-1387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.0411552986057	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGAGATTGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	59442391	59650338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601661_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828
ES.19091.32	chr2	+	7189	28	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	34.0196425145468	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442391	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038_59674157_59674383
ES.19091.33	chr2	+	5881	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	5	-1492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	34.5410312561262	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCCACCTCTTGGGT	NA	False	NA	20	True	AATAAA	-44	NA	59442392	59674567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636659_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.34	chr2	+	7226	26	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	34.8983438002436	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442392	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59477112_59477217_59529691_59529772_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.35	chr2	+	7468	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.6668847664206	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442393	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601661_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.36	chr2	+	7431	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.5164612130873	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442397	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615646_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.37	chr2	+	7195	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	43.0482047127878	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTGGCATTCATT	NA	False	NA	10	True	AATAAA	-12	NA	59442400	59676058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038_59674317_59674421
ES.19091.38	chr2	+	9597	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	20	-2195	-13	1763	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTAAGGTGTGTTTAT	NA	False	NA	NA	False	ATTAAA	-28	NA	59442405	59678256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.39	chr2	+	4498	26	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	35.0230552636403	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTATATTTATATATT	NA	False	NA	NA	False	GATAAA	-14	NA	59442411	59676486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59676260
ES.19091.40	chr2	+	1668	10	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	27	53741	-6	6477	5prime_fragment	FALSE	canonical	3	118	junction_5	16.8325082306035	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGTTCTAGCTATTGT	NA	False	NA	NA	False	AATGAA	-11	NA	59442412	59622320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942
ES.19091.42	chr2	+	6855	24	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	46.7981225287054	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442416	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529693_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59647890_59665805_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.43	chr2	+	7332	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	34.1177910867491	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442416	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669377_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.44	chr2	+	4668	25	ISM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	29	4684	-2	-4250	5prime_fragment	FALSE	canonical	3	10	junction_9	34.154647276111	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAGTGGTCAACTTGTA	NA	False	NA	NA	False	AGTAAA	-17	NA	59442416	59671809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282
ES.19091.45	chr2	+	7073	25	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	35.3804471660078	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442416	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.46	chr2	+	7494	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	35	-107	2	107	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACGGGTTTTATTTTAA	NA	False	NA	NA	False	AGTAAA	-21	NA	59442420	59676168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.47	chr2	+	7498	28	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.7714164708297	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442427	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59474701_59474822_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.48	chr2	+	9913	26	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	10	0	intron_retention	FALSE	canonical	3	118	junction_5	18.297365930647	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442428	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.49	chr2	+	6921	24	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.4006551026044	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTGGCATTCATT	NA	False	NA	10	True	AATAAA	-12	NA	59442432	59676058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.5	chr2	+	7956	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	-35	-499	-35	67	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTTCCCTGTCGTCCA	NA	False	NA	NA	False	TTTAAA	-44	NA	59442350	59676560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.50	chr2	+	7288	27	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	34.3924659769597	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442433	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645745_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.51	chr2	+	4607	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	49	2766	16	-2764	multi-exon	FALSE	canonical	3	118	junction_5	18.3464360565297	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCCCCGACTCCCAGA	NA	False	NA	NA	False	NA	NA	NA	59442434	59673295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.52	chr2	+	8832	26	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	44.6801969556984	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442439	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667667_59667724_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.54	chr2	+	7367	27	NNC	ENSMUSG00000035168.17	novel	7246	26	NA	NA	967	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.7275216979668	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTTGGCATTCATTGC	NA	False	NA	12	True	AATAAA	-14	NA	59443385	59676060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59443490_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601478_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.55	chr2	+	7320	27	NIC	ENSMUSG00000035168.17	novel	7246	26	NA	NA	147	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.5164612130873	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59460553	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_59460607_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.56	chr2	+	7259	27	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	25020	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.9230199429887	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59502174	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59502223_59529691_59529772_59536736_59536787_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.57	chr2	+	7164	25	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	87303	2	-7499	0	3prime_fragment	FALSE	canonical	3	118	junction_3	18.2161024615281	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59529688	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.58	chr2	+	7231	25	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-7344	105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5404454655381	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCACGGGTTTTATTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	59529843	59676166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59529887_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.59	chr2	+	178	1	Intergenic	novelGene_15837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59571190	59571368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59571200_59571400
ES.19091.6	chr2	+	7565	28	NNC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	42.3786575682141	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442351	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59442541_59477112_59477217_59529691_59529772_59529999_59530111_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.60	chr2	+	7273	25	NNC	ENSMUSG00000035168.17	novel	4212	16	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.120294851857	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59572990	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59573277_59575289_59575383_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.61	chr2	+	2260	1	Intergenic	novelGene_15839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCCTTGAGTACCTCTCT	NA	False	NA	NA	False	NA	NA	NA	59593537	59595797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59593500_59595800
ES.19091.62	chr2	+	6657	21	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	160310	2	2990	0	3prime_fragment	FALSE	canonical	3	128	junction_14	16.8240155729838	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	4115	False	NA	11	True	AATAAA	-13	NA	59602695	59676059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.63	chr2	+	6867	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3688	102	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACAGCACGGGTTTTAT	7786	False	NA	NA	False	AGTAAA	-16	NA	59606366	59676163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.64	chr2	+	6765	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3688	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	7786	False	NA	13	True	AATAAA	-15	NA	59606366	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.65	chr2	+	5270	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3686	-1491	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCACCTCTTGGGTG	7788	False	NA	21	True	AATAAA	-45	NA	59606368	59674568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.66	chr2	+	5263	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3680	-1513	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.8510971661048	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTACATGTTAGC	7794	False	NA	-1	True	AATAAA	-23	NA	59606374	59674546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.67	chr2	+	6774	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3676	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.8510971661048	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	7798	False	NA	13	True	AATAAA	-15	NA	59606378	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.68	chr2	+	7261	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3665	66	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.8510971661048	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGTTCCCTGTCGTCC	7809	False	NA	NA	False	TTTAAA	-43	NA	59606389	59676559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.69	chr2	+	6731	22	NNC	ENSMUSG00000035168.17	novel	2255	2	NA	NA	-3639	25500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	56.7910998743933	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACTAATTAATTAATTAA	7835	False	NA	NA	False	NA	NA	NA	59606415	59701993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673042_59676062_59701974
ES.19091.7	chr2	+	3892	19	ISM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	-32	25064	-32	-728	5prime_fragment	FALSE	canonical	3	118	junction_5	18.6891399111164	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGCCTTAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	59442353	59650997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550
ES.19091.70	chr2	+	7426	20	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3628	0	intron_retention	FALSE	canonical	2	6	junction_1	37.5532124766047	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	7846	False	NA	13	True	AATAAA	-15	NA	59606426	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_59606661_59615667_59615932_59621119_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.71	chr2	+	4559	12	ISM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	160749	3	1492	-1	3prime_fragment	FALSE	canonical	3	128	junction_5	16.5903486829388	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTGGCATTCATT	3602	False	NA	10	True	AATAAA	-12	NA	59637903	59676058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.72	chr2	+	4193	10	ISM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	170673	3	11416	-1	3prime_fragment	FALSE	canonical	3	128	junction_3	17.1493080161299	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGGTTGGCATTCATT	2332	False	NA	10	True	AATAAA	-12	NA	59647827	59676058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.8	chr2	+	5976	27	FSM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	-28	1925	-26	-1491	multi-exon	FALSE	canonical	3	10	junction_9	32.9830734785992	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCACCTCTTGGGTG	NA	False	NA	21	True	AATAAA	-45	NA	59442359	59674568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19091.9	chr2	+	7464	27	FSM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	-23	432	-21	0	multi-exon	FALSE	canonical	3	10	junction_9	32.9830734785992	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442364	59676061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ES.19092.1	chr2	+	1270	1	Antisense	novelGene_ENSMUSG00000026987.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATATGACATACAAGAGT	NA	False	NA	NA	False	AATACA	-27	NA	59789831	59791101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_59789800_59791100
ES.19093.1	chr2	+	1460	1	Antisense	novelGene_ENSMUSG00000026987.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGGAGGGAGGAGGAAT	2436	False	NA	NA	False	NA	NA	NA	59808592	59810052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_59808600_59810100
ES.19094.1	chr2	+	157	1	Intergenic	novelGene_15843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1261	False	NA	NA	False	NA	NA	NA	59813288	59813445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59813300_59813400
ES.19095.1	chr2	+	2610	1	Intergenic	novelGene_15846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGCCTTAAAACTGG	NA	False	NA	NA	False	AAGAAA	-11	NA	59911509	59914119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_59911500_59914100
ES.19096.1	chr2	+	2363	1	Genic_Genomic	ENSMUSG00000086603.2	novel	NA	NA	NA	NA	-255	1384	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTATTTTTGTAGTAG	NA	False	NA	NA	False	AATAAA	-22	NA	59955184	59957547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_59955200_59957500
ES.19097.1	chr2	+	177	1	Intergenic	novelGene_15849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAATACAGATGAAATA	NA	False	NA	NA	False	NA	NA	NA	60009075	60009252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60009100_60009300
ES.19098.1	chr2	+	183	1	Intergenic	novelGene_15850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTGAAGAGGACTAGAG	NA	False	NA	NA	False	NA	NA	NA	60027809	60027992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60027800_60028000
ES.19099.1	chr2	-	2995	1	Intergenic	novelGene_15834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACATCCCGTTCCAC	NA	False	NA	NA	False	NA	NA	NA	59456312	59453317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59453300_59456300
ES.191.1	chr1	-	1489	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	29	-835	3	835	multi-exon	FALSE	canonical	3	315	junction_1	0.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTTCTAGTACATGT	NA	False	NA	NA	False	NA	NA	NA	24044708	24034184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24035442_24042237_24042388_24044626
ES.191.2	chr1	-	673	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	9	1	9	-1	multi-exon	FALSE	canonical	3	315	junction_1	0.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTATTATTTTATTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	24044728	24035020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24035442_24042237_24042388_24044626
ES.191.3	chr1	-	7442	2	FSM	ENSMUSG00000026154.5	ENSMUST00000155767.3	426	2	5	-7021	5	-6	multi-exon	FALSE	canonical	3	316	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGATTTATTATTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	24044706	24035025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24042388_24044626
ES.1910.1	chr1	+	178	1	ISM	ENSMUSG00000015316.12	ENSMUST00000163992.3	4420	5	26060	2439	26060	-2439	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAT	1552	False	NA	NA	False	NA	NA	NA	171620782	171620960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171620800_171621000
ES.19100.1	chr2	-	5969	13	NNC	ENSMUSG00000026988.16	novel	1526	11	NA	NA	1	158179	intron_retention	TRUE	non_canonical	0	0	junction_1	32.074024623604	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGAGCAAGCGGGGC	NA	False	NA	NA	False	NA	NA	NA	59712934	59524528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59524551_59532737_59532894_59685241_59685620_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59706789_59706870_59707010_59707196_59708473
ES.19100.10	chr2	-	4819	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	33	junction_9	15.1200953684366	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712939	59682707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
ES.19100.100	chr2	-	8087	37	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	34	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_35	52.6707906847621	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACATTCTTTTTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	59956007	59729711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.102	chr2	-	4858	20	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-11326	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	63.5291718714353	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTAACATTCTTTTTTTT	NA	False	NA	-11	True	AATAAA	-12	NA	59765602	59729713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731959_59732069_59732331_59733502_59733650_59737259_59737388_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558
ES.19100.103	chr2	-	8850	26	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-2536	-9	intron_retention	FALSE	canonical	3	67	junction_25	41.1293763628869	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAACATTCTTTTTT	NA	False	NA	-13	True	AATAAA	-10	NA	59792923	59729715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364
ES.19100.105	chr2	-	10178	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-34	-9	intron_retention	FALSE	canonical	0	0	junction_33	51.9196877806363	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAACATTCTTTTTT	NA	False	NA	-13	True	AATAAA	-10	NA	59955970	59729715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907204_59907256_59955806
ES.19100.106	chr2	-	7946	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-9	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	45.2444065772844	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAACATTCTTTTTT	1573	False	NA	-13	True	AATAAA	-10	NA	59881011	59729715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.108	chr2	-	7865	36	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-5	-14	combination_of_known_junctions	FALSE	canonical	0	0	junction_35	47.2091827802125	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAAAGGTAACATTCT	NA	False	NA	-18	True	AATAAA	-5	NA	59955941	59729720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59955806
ES.19100.109	chr2	-	7952	37	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-8	-38	combination_of_known_junctions	FALSE	canonical	3	18	junction_35	49.3701923741616	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGTTTTATCTACTG	NA	False	NA	-1	True	AATAAA	-19	NA	59956092	59729826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.11	chr2	-	5873	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	12	-3	intron_retention	FALSE	canonical	3	40	junction_3	11.5181016954473	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712879	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473
ES.19100.110	chr2	-	7614	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39324	-38	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_32	40.7527038608767	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGTTTTATCTACTG	1494	False	NA	-1	True	AATAAA	-19	NA	59881090	59729826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.112	chr2	-	7756	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	-38	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_32	40.5478804901674	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGTTTTATCTACTG	1547	False	NA	-1	True	AATAAA	-19	NA	59881037	59729826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.114	chr2	-	7569	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	15	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	56.1919015154174	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGTGTTTTATCTAC	NA	False	NA	-3	True	AATAAA	-17	NA	59955921	59729828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59955806
ES.19100.115	chr2	-	8614	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	-40	intron_retention	FALSE	canonical	3	49	junction_31	41.1187515630497	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGTGTTTTATCTAC	1592	False	NA	-3	True	AATAAA	-17	NA	59880992	59729828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.118	chr2	-	7170	34	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	2	-41	combination_of_known_splicesites	FALSE	canonical	3	11	junction_18	50.2100272052896	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCACTGTGTTTTATCTA	NA	False	NA	-4	True	AATAAA	-16	NA	59836529	59729829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386
ES.19100.119	chr2	-	7631	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39398	-41	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	51.5817243383186	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCACTGTGTTTTATCTA	1568	False	NA	-4	True	AATAAA	-16	NA	59881016	59729829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59771726_59771815_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.12	chr2	-	2022	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	17.6150503831241	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712958	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
ES.19100.120	chr2	-	7553	36	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-45	-41	combination_of_known_splicesites	FALSE	canonical	3	18	junction_34	49.0353142216538	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCACTGTGTTTTATCTA	NA	False	NA	-4	True	AATAAA	-16	NA	59955981	59729829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.121	chr2	-	7589	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39457	-41	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	44.3000933395878	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCACTGTGTTTTATCTA	1627	False	NA	-4	True	AATAAA	-16	NA	59880957	59729829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.122	chr2	-	7442	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39423	-117	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_32	39.1168067136627	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACAGTATTTTTTCA	1593	False	NA	-80	True	AATAAA	-17	NA	59880991	59729905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.123	chr2	-	3125	6	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	3159	-760	combination_of_known_junctions	FALSE	canonical	3	177	junction_5	23.007824755939	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGTAGTTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	59739721	59730548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887
ES.19100.124	chr2	-	6732	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39394	-760	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_31	39.5207448481984	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGTAGTTTATTTTT	1564	False	NA	-3	True	AATAAA	-19	NA	59881020	59730548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.125	chr2	-	4101	21	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	5411	-760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.0718605720223	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGTAGTTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	59773149	59730548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59753880_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105
ES.19100.126	chr2	-	6808	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39414	-760	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_32	39.1168067136627	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGTAGTTTATTTTT	1584	False	NA	-3	True	AATAAA	-19	NA	59881000	59730548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.127	chr2	-	6905	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	-760	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	44.3000933395878	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGTAGTTTATTTTT	1592	False	NA	-3	True	AATAAA	-19	NA	59880992	59730548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.128	chr2	-	6917	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-761	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	45.6831365159806	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTGTAGTTTATTTT	1573	False	NA	-4	True	AATAAA	-18	NA	59881011	59730549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.129	chr2	-	7333	30	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39401	-2550	intron_retention	FALSE	canonical	3	40	junction_27	35.2553788240679	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGCATTAAAATGAAATTA	1571	False	NA	NA	False	AATAAA	-15	NA	59881013	59736078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.13	chr2	-	1982	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	90	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	19.790149064623	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712801	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712744
ES.19100.130	chr2	-	4102	26	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39398	15	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_23	34.7861121713824	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAAAAAGGCAGAGAGTC	1568	False	NA	NA	False	AAAAAG	-5	NA	59881016	59744508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.131	chr2	-	4038	23	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39464	-1072	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	31.4919640805856	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGAGGTTGTGATG	1634	False	NA	NA	False	AATAAA	-30	NA	59880950	59748325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.132	chr2	-	3026	3	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-2147	-3430	intron_retention	FALSE	canonical	0	0	junction_1	69.5	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATGACAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	59756423	59750683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59750877_59752486_59755260_59756363
ES.19100.133	chr2	-	3602	4	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-10000	2762	intron_retention	FALSE	canonical	3	131	junction_3	13.5973853695808	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAATTAGATTTATTGAAT	NA	False	NA	NA	False	AATAAA	-42	NA	59764276	59752303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59752562_59753884_59755260_59756363_59756505_59762448
ES.19100.134	chr2	-	4003	18	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-11	-9579	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	45.7563125525681	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCTTTATATTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	59955947	59764644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.135	chr2	-	3572	16	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39461	-9590	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_12	33.1334004023466	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTTTTGTACTCCTTT	1631	False	NA	NA	False	AATAAA	-10	NA	59880953	59764655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.136	chr2	-	3185	16	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	-10106	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_13	35.2234770193593	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTTGCCTGTAATGCT	1592	False	NA	NA	False	AATAAA	-19	NA	59880992	59765171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.137	chr2	-	3090	7	ISM	ENSMUSG00000026987.17	ENSMUST00000090925.13	7576	34	43880	37240	-2264	-11963	intron_retention	FALSE	canonical	3	69	junction_6	26.6296618245311	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTCTTAATATAATTC	NA	False	NA	0	True	NA	NA	NA	59792651	59767028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164
ES.19100.138	chr2	-	6536	4	NNC	ENSMUSG00000026987.17	novel	890	10	NA	NA	-2996	11071	intron_retention	TRUE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATATGTGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	59781556	59772734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773980_59776024_59777244_59777448_59778003_59778038
ES.19100.139	chr2	-	7194	4	NNC	ENSMUSG00000026987.17	novel	890	10	NA	NA	-3656	11071	intron_retention	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATATGTGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	59782216	59772734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773980_59776024_59777238_59777444_59778003_59778038
ES.19100.14	chr2	-	5745	11	NNC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.0916273732833	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712945	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59709616_59709809
ES.19100.140	chr2	-	4942	4	NNC	ENSMUSG00000026987.17	novel	890	10	NA	NA	-1400	11071	intron_retention	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATATGTGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	59779960	59772734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773980_59776024_59777240_59777442_59778003_59778038
ES.19100.141	chr2	-	8587	4	NNC	ENSMUSG00000026987.17	novel	890	10	NA	NA	-5065	11056	intron_retention	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	59783625	59772749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773980_59776024_59777254_59777459_59778001_59778038
ES.19100.142	chr2	-	2993	14	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	11049	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	44.4081393467086	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1598	False	NA	NA	False	NA	NA	NA	59880986	59772756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831871_59831901_59836386_59836534_59880905
ES.19100.143	chr2	-	6632	8	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-2757	11049	intron_retention	TRUE	non_canonical	0	0	junction_2	65.4974684041066	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59793144	59772756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59773168_59773281_59773980_59776024_59777244_59777449_59778001_59778038_59778642_59787973_59788083_59788775_59788837_59790164
ES.19100.144	chr2	-	6261	1	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-4777	6729	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTAAATGGCTATCAG	NA	False	NA	NA	False	NA	NA	NA	59783337	59777076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59777100_59783300
ES.19100.145	chr2	-	178	1	Intergenic	novelGene_15842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	59777448	59777270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59777300_59777400
ES.19100.146	chr2	-	5058	7	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	-11342	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	34.7407061912487	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTGAGTAATGTAAT	1598	False	NA	NA	False	NA	NA	NA	59880986	59795147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.147	chr2	-	4497	8	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-12117	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	38.7940664514141	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACAGTCTCTTTTGTT	1573	False	NA	NA	False	AATATA	-19	NA	59881011	59795922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.148	chr2	-	1228	7	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39402	10015	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	34.7407061912487	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTTGACCAGTGAATT	1572	False	NA	NA	False	AATAAA	-19	NA	59881012	59799003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.149	chr2	-	1539	10	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-20	10014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.5598868625633	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTTTGACCAGTGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	59955956	59799004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59834142_59834261_59834585_59834695_59836386_59836534_59907213_59907256_59955806
ES.19100.15	chr2	-	1666	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	22.2666223108895	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712943	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59712744
ES.19100.150	chr2	-	1500	9	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-26	10007	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	58.3989511892123	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTAGTTCTTTGACC	NA	False	NA	NA	False	AATAAA	-11	NA	59955962	59799011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.151	chr2	-	174	1	Intergenic	novelGene_15844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATACA	NA	False	NA	NA	False	NA	NA	NA	59847579	59847405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59847400_59847600
ES.19100.152	chr2	-	4327	1	Intergenic	novelGene_15845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59857019	59852692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59852700_59857000
ES.19100.153	chr2	-	9687	3	Antisense	novelGene_ENSMUSG00000085975.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGAAAAAACTCTGAAGAA	7294	False	NA	NA	False	AGTAAA	-25	NA	59875290	59865428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_59871253_59871383_59871576_59871619
ES.19100.154	chr2	-	3559	1	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-20	-45224	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGCACAGTGCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	59955956	59952397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59952400_59956000
ES.19100.155	chr2	-	1947	1	NIC	ENSMUSG00000026987.17	novel	657	4	NA	NA	-2	-46966	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	GATAAA	-44	NA	59956086	59954139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59954100_59956100
ES.19100.156	chr2	-	236	1	Intergenic	novelGene_15847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTCAACAACTTGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	59967589	59967353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59967400_59967600
ES.19100.157	chr2	-	176	1	Intergenic	novelGene_15848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	3296	False	NA	NA	False	NA	NA	NA	60007269	60007093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_60007100_60007300
ES.19100.158	chr2	-	3444	2	ISM	ENSMUSG00000026987.17	ENSMUST00000151756.2	693	3	-7	5	-7	-5	intron_retention	FALSE	canonical	3	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATCCATCTCTTATTA	9143	False	NA	NA	False	ATTAAA	-13	NA	60040152	60036474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60036905_60037138
ES.19100.159	chr2	-	3268	1	Genic_Genomic	ENSMUSG00000026987.17	novel	NA	NA	NA	NA	-21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9091	False	NA	NA	False	AATAAA	-17	NA	60040204	60036936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_60036900_60040200
ES.19100.16	chr2	-	2073	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	-3	combination_of_known_junctions	TRUE	canonical	3	4	junction_10	21.0570653225942	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712948	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
ES.19100.160	chr2	-	503	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	-103	6	-12	-6	multi-exon	FALSE	canonical	3	22	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTCCTTTAATTGA	9100	False	NA	NA	False	AATAAA	-10	NA	60040195	60036943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60037308_60040056
ES.19100.161	chr2	-	1144	2	FSM	ENSMUSG00000026987.17	ENSMUST00000138089.2	509	2	-642	7	0	-6	multi-exon	FALSE	canonical	3	19	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTCCTTTAATTGA	9150	False	NA	NA	False	AATAAA	-10	NA	60040145	60036943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60037308_60039365
ES.19100.17	chr2	-	2070	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	18.5580171354593	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712926	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
ES.19100.18	chr2	-	2865	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	33	junction_9	13.2226890673887	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712919	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
ES.19100.19	chr2	-	1950	12	NNC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.2217715057349	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712948	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59682868_59682969_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
ES.19100.2	chr2	-	6145	1	Intergenic	novelGene_15835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGACTGATCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	59552253	59546108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59546100_59552300
ES.19100.21	chr2	-	2911	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16	junction_9	17.8200885394982	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAATGCCTAAGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	59712928	59682710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
ES.19100.22	chr2	-	1593	10	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	21.4412778318301	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGCAATGCCTAAGTG	NA	False	NA	-4	True	AATAAA	-16	NA	59712948	59682711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59712821
ES.19100.25	chr2	-	1742	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	24.0948127197536	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAATTGCAATGCCTAA	NA	False	NA	-7	True	AATAAA	-13	NA	59712901	59682714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708676_59712821
ES.19100.26	chr2	-	1891	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	2	-160	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	23.1810267244572	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	59712926	59682867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708876_59712744
ES.19100.27	chr2	-	1835	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	-160	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	17.6150503831241	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	59712928	59682867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
ES.19100.28	chr2	-	1934	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	-22	160	-15	-160	multi-exon	FALSE	canonical	3	14	junction_10	21.0228447171167	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	59712950	59682867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
ES.19100.29	chr2	-	1265	8	ISM	ENSMUSG00000026988.16	ENSMUST00000102751.9	1526	11	4109	6146	-92	0	internal_fragment	FALSE	canonical	3	22	junction_1	18.0192640679641	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAACCCTTTGTGTT	NA	False	NA	NA	False	TTTAAA	-38	NA	59708782	59691676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473
ES.19100.3	chr2	-	3600	2	Antisense	novelGene_ENSMUSG00000035168.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGTTGAAATTTGGG	NA	False	NA	NA	False	NA	NA	NA	59564137	59560420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_59560826_59560942
ES.19100.30	chr2	-	7674	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	44.6571716052254	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTAGGGGTGTT	1573	False	NA	0	True	AATAAA	-23	NA	59881011	59729702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.31	chr2	-	7905	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39346	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_32	41.9515172063939	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTAGGGGTGTT	1516	False	NA	0	True	AATAAA	-23	NA	59881068	59729702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.32	chr2	-	6209	31	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-46	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	54.9250904009775	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTTTTAGGGGTG	NA	False	NA	-2	True	AATAAA	-21	NA	59955982	59729704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.33	chr2	-	7710	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39391	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	53.7036767638789	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTTTTTTTAGGGGT	1561	False	NA	-3	True	AATAAA	-20	NA	59881023	59729705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.35	chr2	-	7409	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39370	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_26	37.8594859912611	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1540	False	NA	-4	True	AATAAA	-19	NA	59881044	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.36	chr2	-	7883	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39370	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_32	40.5478804901674	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1540	False	NA	-4	True	AATAAA	-19	NA	59881044	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.37	chr2	-	7371	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39402	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_31	39.6342785106258	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1572	False	NA	-4	True	AATAAA	-19	NA	59881012	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.38	chr2	-	7687	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_32	39.1168067136627	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.39	chr2	-	5225	24	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.2454076543259	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59778524	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742908_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430
ES.19100.4	chr2	-	132	1	Intergenic	novelGene_15836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59564727	59564595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59564600_59564700
ES.19100.40	chr2	-	7616	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39346	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_31	41.0280623855695	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1516	False	NA	-4	True	AATAAA	-19	NA	59881068	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.41	chr2	-	7578	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	47.0675617798588	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956120	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59955806
ES.19100.42	chr2	-	7428	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	58.7130107459496	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956001	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764075_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807747_59836399_59836534_59907213_59907256_59955806
ES.19100.43	chr2	-	7676	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39382	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_32	40.7527038608767	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1552	False	NA	-4	True	AATAAA	-19	NA	59881032	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.44	chr2	-	8002	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	54.6660667875849	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.46	chr2	-	7786	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_34	49.9180880062937	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956001	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.47	chr2	-	8724	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	0	intron_retention	FALSE	canonical	3	30	junction_31	42.5405566716953	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1598	False	NA	-4	True	AATAAA	-19	NA	59880986	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.48	chr2	-	8547	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39422	0	intron_retention	FALSE	canonical	3	63	junction_31	39.6927825689059	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1592	False	NA	-4	True	AATAAA	-19	NA	59880992	59729706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.5	chr2	-	1541	1	Intergenic	novelGene_15838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATTTACAAAAGCTGCT	NA	False	NA	NA	False	NA	NA	NA	59592016	59590475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59590500_59592000
ES.19100.52	chr2	-	7981	38	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	60.7439392077498	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTTTTTTTTTTAGGG	NA	False	NA	-5	True	AATAAA	-18	NA	59955978	59729707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750880_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.53	chr2	-	7820	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	36267	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	50.4484474265647	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59884147	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59883985
ES.19100.54	chr2	-	7728	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	52.3699328010997	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955980	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764057_59765554_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59955806
ES.19100.55	chr2	-	7976	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_35	53.6234297879409	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955899	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.56	chr2	-	7563	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_31	39.5207448481984	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	1573	False	NA	-6	True	AATAAA	-17	NA	59881011	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.57	chr2	-	8016	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	56.8247794149309	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	9122	False	NA	-6	True	AATAAA	-17	NA	60040173	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59955806_59956155_59991778_59991879_60040056
ES.19100.59	chr2	-	9095	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-52	-2	intron_retention	FALSE	canonical	0	0	junction_33	50.9950214681087	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955988	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907204_59907256_59955806
ES.19100.6	chr2	-	5612	5	Genic_Genomic	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-2107	106600	multi-exon	TRUE	non_canonical	0	0	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTCAAAAAATCGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	59780667	59623106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_59623223_59772881_59773980_59776024_59777238_59777444_59778001_59778038
ES.19100.60	chr2	-	7420	4	ISM	ENSMUSG00000026987.17	ENSMUST00000090925.13	7576	34	97457	-80	3806	-2	intron_retention	FALSE	canonical	3	195	junction_1	22.9540604009158	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59739074	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502
ES.19100.61	chr2	-	7771	37	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_18	56.5903830223589	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955955	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.62	chr2	-	8279	33	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-2	intron_retention	FALSE	canonical	3	57	junction_25	38.4413997005507	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	1573	False	NA	-6	True	AATAAA	-17	NA	59881011	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.64	chr2	-	5871	21	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	11494	-2	intron_retention	FALSE	canonical	3	11	junction_17	56.4879411910188	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59767066	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029
ES.19100.65	chr2	-	2404	2	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-21410	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59811797	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59730818_59810502
ES.19100.66	chr2	-	7347	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	52.3759367870901	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955939	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59808956_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.67	chr2	-	9989	33	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-40	-2	intron_retention	FALSE	canonical	3	18	junction_31	49.7052935906982	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955976	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59752562_59753884_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.69	chr2	-	7178	31	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-17488	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	46.5558684688503	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59807875	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752571_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702
ES.19100.7	chr2	-	144	1	Intergenic	novelGene_15840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	59631936	59631792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59631800_59631900
ES.19100.70	chr2	-	7692	36	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	42	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_34	49.0353142216538	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955999	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.71	chr2	-	7793	36	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	37	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_34	52.2973757487322	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTTTTTTTTTTAGG	NA	False	NA	-6	True	AATAAA	-17	NA	59955899	59729708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.74	chr2	-	4583	9	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-1384	-3	intron_retention	FALSE	canonical	3	21	junction_4	61.434924920602	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59744264	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883
ES.19100.75	chr2	-	7632	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39360	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	50.2693155078986	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	1530	False	NA	-7	True	AATAAA	-16	NA	59881054	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
ES.19100.76	chr2	-	7738	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	44.3000933395878	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	1598	False	NA	-7	True	AATAAA	-16	NA	59880986	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
ES.19100.78	chr2	-	7679	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	58.8071235291931	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59955957	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907204_59907256_59955806
ES.19100.8	chr2	-	161	1	Intergenic	novelGene_15841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	59637256	59637095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_59637100_59637300
ES.19100.80	chr2	-	7336	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.0795782163789	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	1598	False	NA	-7	True	AATAAA	-16	NA	59880986	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747837_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.81	chr2	-	6880	13	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	552	-3	intron_retention	FALSE	canonical	3	146	junction_8	24.9937492185546	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59753724	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638
ES.19100.82	chr2	-	7464	34	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	38	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	45.6400658484623	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59956003	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59955806
ES.19100.83	chr2	-	2433	5	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	4797	-3	intron_retention	FALSE	canonical	3	177	junction_4	8.86002257333467	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59738083	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59732336_59733502_59733650_59737259_59737396_59737887
ES.19100.84	chr2	-	7687	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	40	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_34	50.1518184910496	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59956001	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.85	chr2	-	7508	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39367	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	45.0443307813224	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	1537	False	NA	-7	True	AATAAA	-16	NA	59881047	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.86	chr2	-	7504	35	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	40	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_33	48.282267300119	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59956001	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.87	chr2	-	12236	21	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	2340	-3	intron_retention	FALSE	canonical	3	109	junction_19	34.8423592771787	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59788047	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59755260_59756363_59756505_59762448_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973
ES.19100.88	chr2	-	7957	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39396	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_35	52.9881989540602	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	1566	False	NA	-7	True	AATAAA	-16	NA	59881018	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59877176_59877286_59880905
ES.19100.89	chr2	-	7974	37	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_35	50.4306454450069	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59956003	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.9	chr2	-	2059	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	18.0765040867973	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTAAGTGTGTTCTTA	NA	False	NA	4	True	AATAAA	-24	NA	59712948	59682703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
ES.19100.90	chr2	-	6816	30	NNC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	-17420	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	53.1748065117535	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59807807	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750877_59752486_59752562_59753884_59754100_59754997_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702
ES.19100.93	chr2	-	6770	24	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	113	-3	intron_retention	FALSE	canonical	3	11	junction_17	53.9272071156739	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTTTTTTTTTAG	NA	False	NA	-7	True	AATAAA	-16	NA	59778447	59729709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763755_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430
ES.19100.94	chr2	-	7700	36	NIC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	23	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_34	48.7196561765288	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTCTTTTTTTTTTA	NA	False	NA	-8	True	AATAAA	-15	NA	59955913	59729710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.95	chr2	-	4476	3	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	4412	-4	intron_retention	FALSE	canonical	3	195	junction_1	0.5	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTCTTTTTTTTTTA	NA	False	NA	-8	True	AATAAA	-15	NA	59738468	59729710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59733650_59737259
ES.19100.96	chr2	-	7755	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39403	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	45.6831365159806	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACATTCTTTTTTTTTT	1573	False	NA	-9	True	AATAAA	-14	NA	59881011	59729711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.97	chr2	-	7658	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39428	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	51.8706869365088	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACATTCTTTTTTTTTT	1598	False	NA	-9	True	AATAAA	-14	NA	59880986	59729711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763749_59763783_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
ES.19100.98	chr2	-	7537	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.859871126819	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACATTCTTTTTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	59956012	59729711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59763988_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778633_59787966_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59907213_59907256_59955806
ES.19100.99	chr2	-	7001	5	NIC	ENSMUSG00000026987.17	novel	7576	34	NA	NA	1287	-5	intron_retention	FALSE	canonical	3	177	junction_4	25.6758641529355	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACATTCTTTTTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	59741593	59729711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_59731147_59731818_59731963_59732069_59733650_59737259_59737396_59737887
ES.19101.1	chr2	+	3706	11	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	-6	81	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	145.637769826374	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTCTATTTTCTCAA	NA	False	NA	9	True	ATTAAA	-21	NA	60040224	60079636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60077831_60077857_60078233
ES.19101.10	chr2	+	3475	8	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	2	-391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.853925313121	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACATGATTTCCTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	60040232	60073089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60071721
ES.19101.11	chr2	+	6055	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	2	-6	intron_retention	FALSE	canonical	3	17	junction_4	115.100431689025	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040232	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60074015_60075555_60075605_60078233
ES.19101.12	chr2	+	3681	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-178	-1232	8	-6	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040238	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.13	chr2	+	6184	10	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	8	-7	intron_retention	FALSE	canonical	3	14	junction_1	143.454212594511	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTTTGAACTTTTT	NA	False	NA	20	True	AATAAA	-17	NA	60040238	60079548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60074015_60075555_60075605_60078233
ES.19101.14	chr2	+	3566	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	147.126551724093	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040240	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071420_60073900_60074015_60075555_60075605_60078233
ES.19101.16	chr2	+	6288	9	ISM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	14	-79	-12	79	intron_retention	FALSE	canonical	3	327	junction_5	26.7812317677884	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040244	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555
ES.19101.17	chr2	+	2339	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	17	1238	-9	0	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATCTGTGAACATGTT	NA	False	NA	NA	False	AAGAAA	-11	NA	60040247	60078317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.18	chr2	+	3529	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	112.133298101901	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040254	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.19	chr2	+	3131	1	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	4	-21346	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGATAGACAAGATCAT	NA	False	NA	NA	False	NA	NA	NA	60040260	60043391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040300_60043400
ES.19101.2	chr2	+	6182	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	-5	79	intron_retention	FALSE	canonical	3	327	junction_5	23.4677305038216	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040225	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60074015_60075555_60075605_60078233
ES.19101.20	chr2	+	4032	11	NNC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	4	445	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	146.153652024163	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTATGAAAATGATTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	60040260	60080000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60065424_60065448_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.22	chr2	+	3676	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	6	84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.363632451549	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTATTTTCTCAAGTT	NA	False	NA	12	True	ATTAAA	-24	NA	60040262	60079639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065372_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.23	chr2	+	961	4	ISM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	33	16577	7	-1759	5prime_fragment	FALSE	canonical	3	355	junction_1	4.49691252107735	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTTCTATAGGATAGC	NA	False	NA	NA	False	AATAAA	-15	NA	60040263	60062978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543
ES.19101.25	chr2	+	4006	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	36	-448	10	448	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAAAATGATTTTTTGG	NA	False	NA	NA	False	ATTAAA	-26	NA	60040266	60080003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.26	chr2	+	2730	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	36	828	10	410	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGTTTTTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	60040266	60078727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.27	chr2	+	3701	11	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	11	78	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	162.483506855311	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATGGTTCTATTTTCT	NA	False	NA	6	True	ATTAAA	-18	NA	60040267	60079633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.28	chr2	+	5584	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	112.313164471402	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040267	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60073430_60073900_60074015_60075555_60075605_60078233
ES.19101.29	chr2	+	3662	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	116.134447415671	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAACTTTTTCCTTTT	NA	False	NA	26	True	AATAAA	-23	NA	60040267	60079554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065448_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.3	chr2	+	3678	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	0	-84	0	84	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTATTTTCTCAAGTT	NA	False	NA	12	True	ATTAAA	-24	NA	60040230	60079639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.30	chr2	+	2295	9	ISM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	38	3890	12	2185	5prime_fragment	FALSE	canonical	3	327	junction_5	26.7812317677884	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTTTTAAGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	60040268	60075665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555
ES.19101.32	chr2	+	4831	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	12	0	intron_retention	FALSE	canonical	1	3	junction_8	148.273604287463	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	60040268	60078301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60074015_60075555_60075605_60077831_60077857_60078233
ES.19101.33	chr2	+	3571	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	113.854141040626	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAGTTTGAACTTTT	NA	False	NA	19	True	AATAAA	-16	NA	60040268	60079547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071420_60073900_60074015_60075555_60075605_60078233
ES.19101.34	chr2	+	3193	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	38	363	12	-363	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATCCTGGTCATTTTT	NA	False	NA	NA	False	TATAAA	-8	NA	60040268	60079192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.35	chr2	+	3644	11	NNC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	141.713125715299	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGAACTTTTTCCTTT	NA	False	NA	25	True	AATAAA	-22	NA	60040268	60079553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071420_60073362_60073430_60073900_60074015_60075555_60075605_60078233
ES.19101.36	chr2	+	3479	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.716179969474	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTAGTTTGAACTT	NA	False	NA	17	True	AATAAA	-14	NA	60040269	60079545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062609_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.37	chr2	+	7559	8	NIC	ENSMUSG00000026977.18	novel	4972	9	NA	NA	13	-6	intron_retention	FALSE	canonical	3	17	junction_4	121.033306261086	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040269	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60075605_60078233
ES.19101.38	chr2	+	3546	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	117.339435868239	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040270	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075609_60078239
ES.19101.39	chr2	+	3457	9	NIC	ENSMUSG00000026977.18	novel	4972	9	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	155.81058211816	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGAACTTTTTCCTTTT	NA	False	NA	26	True	AATAAA	-23	NA	60040282	60079554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
ES.19101.4	chr2	+	3624	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	79	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	119.982290359869	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040230	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
ES.19101.40	chr2	+	4072	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-116	-1685	44	447	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAAAATGATTTTTTG	NA	False	NA	NA	False	ATTAAA	-25	NA	60040300	60080002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.41	chr2	+	3509	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.474126836058	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGAACTTTTTCCTTT	NA	False	NA	25	True	AATAAA	-22	NA	60040303	60079553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060037_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.42	chr2	+	5139	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	49	79	intron_retention	FALSE	canonical	3	327	junction_5	28.660730974628	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040305	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60075605_60078233
ES.19101.43	chr2	+	3476	9	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	4148	-1333	-3186	79	3prime_fragment	FALSE	canonical	3	327	junction_4	28.8173125048121	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60059260	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.44	chr2	+	5894	6	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	-263	-5	intron_retention	FALSE	canonical	3	327	junction_2	29.076450952618	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	22	True	AATAAA	-19	NA	60062183	60079550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60062712_60064242_60065342_60067097_60067271_60071286_60074015_60075555_60075605_60078233
ES.19101.45	chr2	+	7566	4	NNC	ENSMUSG00000026977.18	novel	539	6	NA	NA	-22	-6	intron_retention	FALSE	canonical	0	0	junction_1	166.461874180112	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60067209	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60067271_60067874_60074015_60075555_60075605_60078233
ES.19101.46	chr2	+	5294	2	FSM	ENSMUSG00000026977.18	ENSMUST00000126986.2	3346	2	-702	-1246	-702	-10	multi-exon	FALSE	canonical	3	371	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTAGTTTGAACTT	681	False	NA	17	True	AATAAA	-14	NA	60072710	60079545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60074015_60075555
ES.19101.47	chr2	+	1894	2	FSM	ENSMUSG00000026977.18	ENSMUST00000136367.2	238	2	-408	-1248	-408	-6	multi-exon	FALSE	canonical	2	8	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	5249	False	NA	21	True	AATAAA	-18	NA	60077278	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60077857_60078233
ES.19101.5	chr2	+	3799	12	NIC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	0	79	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	172.765402489968	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGTTCTATTTTCTC	NA	False	NA	7	True	ATTAAA	-19	NA	60040230	60079634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60077831_60077857_60078233
ES.19101.6	chr2	+	7939	9	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	-8	intron_retention	FALSE	canonical	2	5	junction_6	118.001059317279	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAGTTTGAACTTTT	NA	False	NA	19	True	AATAAA	-16	NA	60040230	60079547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60062712_60064242_60065342_60067097_60067271_60071286_60073430_60073900_60074015_60075555_60075605_60078233
ES.19101.7	chr2	+	3513	12	NNC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	159.942861698372	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAGTTTGAACTTTT	NA	False	NA	19	True	AATAAA	-16	NA	60040231	60079547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60064555_60064900_60065342_60067097_60067271_60067874_60068149_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19101.8	chr2	+	6115	10	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	1	-5	intron_retention	FALSE	canonical	2	4	junction_6	148.864674647899	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGAACTTTTTCC	NA	False	NA	22	True	AATAAA	-19	NA	60040231	60079550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60065424_60065448_60067097_60067271_60071286_60074015_60075555_60075605_60078233
ES.19101.9	chr2	+	3609	11	NNC	ENSMUSG00000026977.18	novel	2271	11	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	146.153652024163	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	False	NA	21	True	AATAAA	-18	NA	60040232	60079549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60065424_60065448_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ES.19102.1	chr2	-	3091	1	Antisense	novelGene_ENSMUSG00000026977.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACAGTTCTGATATCTC	NA	False	NA	NA	False	AATAAA	-37	NA	60065930	60062839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_60062800_60065900
ES.19103.1	chr2	+	786	2	Antisense	novelGene_ENSMUSG00000060703.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	NA	False	NA	NA	False	NA	NA	NA	60098099	60099283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_60098215_60098612
ES.19103.2	chr2	+	674	2	Antisense	novelGene_ENSMUSG00000060703.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	NA	False	NA	NA	False	NA	NA	NA	60098129	60099283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_60098215_60098694
ES.19103.3	chr2	+	430	2	Antisense	novelGene_ENSMUSG00000060703.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTAAATAGCCCAAAGAG	NA	False	NA	NA	False	TTTAAA	-42	NA	60098139	60098967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_60098215_60098612
ES.19104.1	chr2	-	1039	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	315	0	245	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4247	False	NA	-4	True	AATAAA	-15	NA	60114517	60082336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ES.19104.2	chr2	-	3641	5	NIC	ENSMUSG00000060703.13	novel	1354	6	NA	NA	222	0	intron_retention	FALSE	canonical	3	68	junction_1	7.08872343937891	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4224	False	NA	-4	True	AATAAA	-15	NA	60114540	60082336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ES.19104.3	chr2	-	902	6	NNC	ENSMUSG00000060703.13	novel	1354	6	NA	NA	275	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.4604513635771	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTCACTGCCTGGTCTTC	4277	False	NA	-6	True	AATAAA	-13	NA	60114487	60082338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60082836_60085414_60085442_60087376_60087526_60088309_60088344_60102445_60102557_60114403
ES.19104.4	chr2	-	5529	4	NIC	ENSMUSG00000060703.13	novel	1354	6	NA	NA	267	-2	intron_retention	FALSE	canonical	3	71	junction_1	5.90668171555645	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTCACTGCCTGGTCTTC	4269	False	NA	-6	True	AATAAA	-13	NA	60114495	60082338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60087548_60088226_60088344_60102445_60102557_60114403
ES.19104.5	chr2	-	800	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	337	217	267	-217	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGAGCCTTTTATGGT	4269	False	NA	NA	False	TATAAA	-12	NA	60114495	60082553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ES.19104.6	chr2	-	176	1	Intergenic	novelGene_15851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	60084503	60084327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_60084300_60084500
ES.19105.1	chr2	+	172	1	Intergenic	novelGene_15852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	60142634	60142806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60142600_60142800
ES.19106.1	chr2	+	185	1	Intergenic	novelGene_15853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAATTAAATTT	962	False	NA	NA	False	NA	NA	NA	60211613	60211798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60211600_60211800
ES.19107.1	chr2	+	1283	5	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27317	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	83.6017344317688	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	2569	False	NA	NA	False	NA	NA	NA	60214551	60242917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60214668_60224249_60224969_60241980_60242062_60242190_60242353_60242712
ES.19107.10	chr2	+	1754	2	NIC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-15	1044	intron_retention	FALSE	canonical	3	174	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGAGAATCTCAGATAT	9331	False	NA	NA	False	AATAAA	-14	NA	60241853	60243967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_60242353_60242712
ES.19107.11	chr2	+	616	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-15	-32	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	74.2473344078201	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATGAAAATGA	9331	False	NA	NA	False	NA	NA	NA	60241853	60242891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60242062_60242190_60242353_60242508_60242576_60242712
ES.19107.12	chr2	+	3562	1	Antisense	novelGene_ENSMUSG00000054580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGAGAGTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	60244781	60248343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_60244800_60248300
ES.19107.2	chr2	+	494	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27247	-6	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	58.0344725141876	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	2639	False	NA	NA	False	NA	NA	NA	60214621	60242917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60214668_60241980_60242062_60242190_60242353_60242712
ES.19107.3	chr2	+	706	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27242	-6	intron_retention	FALSE	canonical	0	0	junction_2	22.1710521977545	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	2644	False	NA	NA	False	NA	NA	NA	60214626	60242917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60214668_60241980_60242353_60242487_60242576_60242712
ES.19107.4	chr2	+	1250	5	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-20774	-32	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	83.3377915474126	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATGAAAATGA	9112	False	NA	NA	False	NA	NA	NA	60221094	60242891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60221204_60224249_60224969_60241980_60242062_60242190_60242353_60242712
ES.19107.5	chr2	+	5915	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-5355	6	-5355	-6	multi-exon	FALSE	canonical	3	174	junction_2	3	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	3991	False	NA	NA	False	NA	NA	NA	60236513	60242917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60242062_60242190_60242353_60242712
ES.19107.6	chr2	+	605	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-1333	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.4745470188368	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATGAAAATGA	8013	False	NA	NA	False	NA	NA	NA	60240535	60242891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60240719_60241980_60242062_60242190_60242353_60242712
ES.19107.7	chr2	+	1784	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	-174	-1044	-174	1044	multi-exon	FALSE	canonical	3	174	junction_2	3	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGAGAATCTCAGATAT	9172	False	NA	NA	False	AATAAA	-14	NA	60241694	60243967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_60242062_60242190_60242353_60242712
ES.19107.8	chr2	+	4359	1	Genic_Genomic	ENSMUSG00000087283.2	novel	NA	NA	NA	NA	-20	3284	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATTTCGGTTGTCTTA	9326	False	NA	NA	False	CATAAA	-12	NA	60241848	60246207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_60241800_60246200
ES.19107.9	chr2	+	771	3	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	22	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGTGTGGTGGTATAC	9331	False	NA	NA	False	NA	NA	NA	60241853	60242917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_60242353_60242508_60242576_60242712
ES.19108.10	chr2	-	6801	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-1415	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.775046516375	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCTTGGCTCAGTGTT	NA	False	NA	-7	True	AATAAA	-24	NA	60215062	60122442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60215000
ES.19108.100	chr2	-	5574	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-48	-354	24	354	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCACATTTACCTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	60213623	60123749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.103	chr2	-	5299	34	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-73	5054	-1	-5054	5prime_fragment	FALSE	canonical	0	0	junction_18	112.610088977754	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAACTGTTAAACAGC	NA	False	NA	NA	False	AATAAA	-20	NA	60213648	60129157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.104	chr2	-	1496	3	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	71439	-13150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	303	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60142136	60137253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60137527_60137670_60138710_60141952
ES.19108.105	chr2	-	4313	28	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-78	20123	-6	-20123	5prime_fragment	FALSE	canonical	0	0	junction_12	116.48844706253	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATACAGTCCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	60213653	60144226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.106	chr2	-	5502	26	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-32	22754	-32	-22754	5prime_fragment	FALSE	canonical	0	0	junction_10	119.951096701948	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTCATGTAACCTAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	60213607	60146857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.107	chr2	-	3806	26	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-15	24433	-15	-24433	5prime_fragment	FALSE	canonical	0	0	junction_10	119.951096701948	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTATCATTATTGCGTG	NA	False	NA	NA	False	AAGAAA	-11	NA	60213590	60148536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.108	chr2	-	3652	25	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-66	27862	6	-27862	5prime_fragment	FALSE	canonical	0	0	junction_9	122.22997450162	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCATGAATGTCTATTTC	NA	False	NA	NA	False	AAGAAA	-28	NA	60213641	60151965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.109	chr2	-	4270	24	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-32	29104	-32	-29104	5prime_fragment	FALSE	canonical	0	0	junction_8	124.825761361319	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAGAGAGAGAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	60213607	60153207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.110	chr2	-	3514	18	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-32	37672	-32	-37672	5prime_fragment	FALSE	canonical	0	0	junction_2	143.926884552143	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATGTATATGTGTATA	NA	False	NA	NA	False	AATATA	-41	NA	60213607	60161775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.111	chr2	-	3223	15	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	37	-44662	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	207.332437876755	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAAGTTGCAAATGTTG	NA	False	NA	NA	False	NA	NA	NA	60213538	60168765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60169886_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184848_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.112	chr2	-	1674	10	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	25861	-45347	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	184.077882068071	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTTGACTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	60187714	60169450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60169886_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620
ES.19108.113	chr2	-	3177	13	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-48	53581	24	-53581	5prime_fragment	FALSE	canonical	3	442	junction_4	56.401585872109	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGAACGTATTCTA	NA	False	NA	NA	False	GATAAA	-8	NA	60213623	60177684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.114	chr2	-	133	2	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	25876	61747	25876	-61747	internal_fragment	FALSE	canonical	3	506	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTATCTGCTGGCG	NA	False	NA	NA	False	NA	NA	NA	60187699	60185850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60185905_60187620
ES.19108.115	chr2	-	2130	6	ISM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-49	62490	23	-62490	5prime_fragment	FALSE	canonical	3	533	junction_4	45.5174691739336	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACGAAAGTGCTTTCTG	NA	False	NA	NA	False	GATAAA	-4	NA	60213624	60186593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.116	chr2	-	3180	5	NIC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	-31	-62544	intron_retention	FALSE	canonical	3	533	junction_3	47.2969343615419	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	60213678	60186647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.13	chr2	-	6783	34	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	144.096239903939	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCTTGGCTCAGTGTT	NA	False	NA	-7	True	AATAAA	-24	NA	60213648	60122442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.15	chr2	-	5809	2	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	84066	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCCTTGGCTCAGTGT	NA	False	NA	-8	True	AATAAA	-23	NA	60129509	60122443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60126898_60128154
ES.19108.16	chr2	-	6845	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.923606595841	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCCTTGGCTCAGTGT	NA	False	NA	-8	True	AATAAA	-23	NA	60213681	60122443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152134_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.19	chr2	-	6657	33	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	34	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	114.622814694272	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCCTTGGCTCAGTG	NA	False	NA	-9	True	AATAAA	-22	NA	60213613	60122444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.2	chr2	-	6954	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-119	-1663	-47	6	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	NA	False	NA	-5	True	AATAAA	-26	NA	60213694	60122440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.20	chr2	-	6797	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.894994708416	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCCTTGGCTCAGT	NA	False	NA	-10	True	AATAAA	-21	NA	60213591	60122445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182754_60183281_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.21	chr2	-	5513	30	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	27710	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.618670176324	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCTCCTTGGCTCAGT	NA	False	NA	-10	True	AATAAA	-21	NA	60185865	60122445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123007_60123230_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712
ES.19108.22	chr2	-	6629	33	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	150.303361858401	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213600	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.25	chr2	-	6502	33	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	151.191152679109	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213584	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60206201_60206574_60213481
ES.19108.26	chr2	-	4874	22	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	45708	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	212.286846543585	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60167867	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60165679_60165805_60167679
ES.19108.29	chr2	-	6573	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213594	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123651_60123925_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.3	chr2	-	6775	37	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	21	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.120154160318	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	NA	False	NA	-5	True	AATAAA	-26	NA	60213626	60122440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122767_60122826_60122867_60122917_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.30	chr2	-	6864	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	146.970811898734	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213617	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199109_60199274_60206201_60206574_60213481
ES.19108.32	chr2	-	6638	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.822293673627	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213627	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122767_60122949_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136783_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.33	chr2	-	6831	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213627	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123502_60123551_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.34	chr2	-	6648	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213584	60122446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122755_60122944_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.36	chr2	-	7807	33	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	178.376521980192	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213584	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158126_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60164793_60164909_60168638_60169886_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.37	chr2	-	6530	34	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	147.389148397015	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213649	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60213481
ES.19108.39	chr2	-	6366	12	ISM	ENSMUSG00000026980.16	ENSMUST00000112533.8	6901	35	56664	1	56592	-1	3prime_fragment	FALSE	canonical	3	519	junction_8	53.7011934859755	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60156983	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162
ES.19108.4	chr2	-	6868	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	146.979684588248	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCTCAGTGTTTC	NA	False	NA	-5	True	AATAAA	-26	NA	60213617	60122440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180393_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.41	chr2	-	6841	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213626	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123034_60123071_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.42	chr2	-	6602	33	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	150.955032625613	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213661	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.43	chr2	-	6971	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.367497545223	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213649	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138413_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.45	chr2	-	5999	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213617	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122494_60123364_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.47	chr2	-	6899	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-23608	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	170.101136782486	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60237255	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60217901_60217981_60237169
ES.19108.49	chr2	-	6298	1	NIC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	84830	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	873	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60128745	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60122400_60128700
ES.19108.50	chr2	-	4165	24	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.071054465086	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213626	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123503_60158224_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.53	chr2	-	6863	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.045496310279	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213590	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60124481_60124511_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180393_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.54	chr2	-	6742	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	147.089635007514	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213681	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180234_60182423_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.55	chr2	-	6804	35	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	173.629911077444	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213616	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152267_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163301_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184848_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.56	chr2	-	6869	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	147.057058812941	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213626	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158140_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.58	chr2	-	8053	34	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_18	113.175769584026	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213626	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.59	chr2	-	6831	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	146.546581396603	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213589	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148662_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.60	chr2	-	6714	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	145.477869635327	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60213605	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138626_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.63	chr2	-	3818	13	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	56238	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	176.789422760526	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATCTCCTTGGCTCA	NA	False	NA	-12	True	AATAAA	-19	NA	60157337	60122447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60157194
ES.19108.64	chr2	-	6796	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAATCTCCTTGGCTC	NA	False	NA	-13	True	AATAAA	-18	NA	60213589	60122448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123027_60123071_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.69	chr2	-	6822	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213623	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122907_60122958_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.72	chr2	-	7717	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	195.97223913634	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213607	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60184144_60184448_60184671_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.73	chr2	-	7938	34	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	197.644159938409	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213617	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152138_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60162839_60163268_60163305_60164792_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183373_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199106_60199274_60206201_60206574_60213481
ES.19108.74	chr2	-	6904	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	173.08275517338	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213627	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178864_60180201_60180402_60182399_60182570_60182695_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.75	chr2	-	7002	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-16	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	192.556328360916	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213591	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161073_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60169721_60169886_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.76	chr2	-	6864	34	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	113.088359450294	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213607	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60164751_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.77	chr2	-	6821	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	173.536051717431	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213623	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162837_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178819_60180231_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.79	chr2	-	6764	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	145.503802016937	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAATCTCCTTGGCT	NA	False	NA	-14	True	AATAAA	-17	NA	60213617	60122449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60133968_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.81	chr2	-	6748	34	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	197.844723041232	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTAATCTCCTTG	NA	False	NA	-17	True	AATAAA	-14	NA	60213626	60122452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138712_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182695_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.82	chr2	-	6853	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	111.726541471596	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTAATCTCCTTG	NA	False	NA	-17	True	AATAAA	-14	NA	60213607	60122452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164795_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.83	chr2	-	6958	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	170.692969380459	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTAATCTCCTTG	NA	False	NA	-17	True	AATAAA	-14	NA	60213577	60122452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164792_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60182899_60183032_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.84	chr2	-	6814	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-1360	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.775046516375	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTAATCTCCTTG	NA	False	NA	-17	True	AATAAA	-14	NA	60215007	60122452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60214922
ES.19108.87	chr2	-	4810	25	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	33206	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.192946060901	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATTTTAATCTCCTT	NA	False	NA	-18	True	AATAAA	-13	NA	60180369	60122453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60123399_60123604_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201
ES.19108.88	chr2	-	6894	34	NNC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	149.088433091044	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATTTTAATCTCCTT	NA	False	NA	-18	True	AATAAA	-13	NA	60213648	60122453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60164760_60164909_60168638_60168708_60170494_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.89	chr2	-	6611	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-30	-1409	-30	-248	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTTGAGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	60213605	60122694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.90	chr2	-	6566	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-116	-1278	-44	-379	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCATATTTATACTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	60213691	60122825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.91	chr2	-	6368	34	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	27	-384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	149.14590633809	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGTTTCATATTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	60213620	60122830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164890_60170530_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.92	chr2	-	6499	36	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-24	-385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.981136000234	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTTTCATATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	60213671	60122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60122937_60122977_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.93	chr2	-	6477	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	30	-385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	195.462816931426	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGTTTCATATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	60213617	60122831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178838_60180201_60180393_60182395_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199272_60206201_60206574_60213481
ES.19108.95	chr2	-	6351	34	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	-32	-387	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	144.096239903939	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTGTTTCATATTT	NA	False	NA	NA	False	AATAAA	-14	NA	60213607	60122833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60124283_60129390_60129559_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.97	chr2	-	6342	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-32	-1138	-32	-519	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGTGATTCCTGTGG	NA	False	NA	NA	False	AATGAA	-6	NA	60213607	60122965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19108.99	chr2	-	5824	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-85	-567	-13	567	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTTACATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	60213660	60123536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ES.19109.1	chr2	-	178	1	Intergenic	novelGene_15854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATAAAGAACATT	9147	False	NA	0	True	NA	NA	NA	60244411	60244233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_60244200_60244400
ES.1911.1	chr1	-	177	1	Genic_Genomic	ENSMUSG00000104413.2	novel	NA	NA	NA	NA	5685	15	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATCTCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	171741190	171741013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_171741000_171741200
ES.19110.1	chr2	+	180	1	Intergenic	novelGene_15855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	60325242	60325422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60325200_60325400
ES.19111.1	chr2	-	1076	2	FSM	ENSMUSG00000054580.15	ENSMUST00000150373.2	1525	2	25	424	25	-424	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATACCGAAGGAAAGTA	NA	False	NA	NA	False	AATAAA	-22	NA	60383627	60364645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60365448_60383353
ES.19112.1	chr2	+	5369	1	Intergenic	novelGene_15857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60660427	60665796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_60660400_60665800
ES.19113.1	chr2	-	4334	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	-31	-1760	1	0	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTGTCGGTTTTTTG	NA	False	NA	0	True	AATAAA	-17	NA	60711813	60580536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.10	chr2	-	1567	14	NNC	ENSMUSG00000026970.17	novel	4436	14	NA	NA	10649	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	86.579033224464	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATTTTCTGGGTATGC	4469	False	NA	NA	False	NA	NA	NA	60701133	60582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60701047
ES.19113.11	chr2	-	2532	13	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	17	76	intron_retention	FALSE	canonical	3	198	junction_4	41.8286850007132	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATTTTCTGGGTATGC	NA	False	NA	NA	False	NA	NA	NA	60711765	60582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.12	chr2	-	1837	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	-3	76	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATTTTCTGGGTATGC	NA	False	NA	NA	False	NA	NA	NA	60711817	60582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.13	chr2	-	2008	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	-126	-76	-126	76	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATTTTCTGGGTATGC	NA	False	NA	NA	False	NA	NA	NA	60711940	60582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.14	chr2	-	2025	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	-47	2458	-47	71	multi-exon	FALSE	canonical	3	25	junction_13	80.5716264093541	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTCAATTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	60793583	60582994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ES.19113.15	chr2	-	1927	14	NNC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	-104	71	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	85.5796110208805	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTCAATTTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	60711918	60582994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612357_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.16	chr2	-	2090	15	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	-65	70	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	91.0514824095665	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTCAATTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	60793601	60582995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ES.19113.17	chr2	-	2064	15	NNC	ENSMUSG00000026970.17	novel	4436	14	NA	NA	-52	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	108.70959253996	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60793588	60583025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60792179_60792245_60793034
ES.19113.18	chr2	-	4869	13	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	19	-36	intron_retention	FALSE	canonical	3	229	junction_12	31.3327792504201	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711763	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.19	chr2	-	1851	14	NIC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	-129	-36	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711943	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.2	chr2	-	4274	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCCTGTCGGTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	60711802	60580537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.20	chr2	-	1804	15	NNC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	13	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	108.70959253996	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711801	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60678497_60678593_60711461
ES.19113.21	chr2	-	1649	14	NNC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	32	-36	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	108.684168675617	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711750	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612357_60623032_60623125_60628027_60628087_60672640_60672814_60711461
ES.19113.22	chr2	-	1764	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	6	36	6	-36	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711808	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.23	chr2	-	1946	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	-75	2565	-75	-36	multi-exon	FALSE	canonical	3	25	junction_13	80.5716264093541	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60793611	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ES.19113.24	chr2	-	1520	12	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	19	-36	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	94.0660924672973	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACGA	NA	False	NA	NA	False	NA	NA	NA	60711763	60583101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60672640_60672817_60711461
ES.19113.25	chr2	-	1375	9	ISM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	43	9082	11	-6388	5prime_fragment	FALSE	canonical	3	229	junction_8	29.0471061381336	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGTGCCCCAGAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	60711771	60592147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.26	chr2	-	1655	1	Intergenic	novelGene_15856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60647602	60645947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_60645900_60647600
ES.19113.27	chr2	-	2161	1	Intergenic	novelGene_15858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAGAAAAGAAGGAGAA	6566	False	NA	NA	False	NA	NA	NA	60667126	60664965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_60665000_60667100
ES.19113.28	chr2	-	5553	1	NIC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	7	12301	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGATCACACAAAAGAA	NA	False	NA	NA	False	AGTAAA	-12	NA	60711807	60706254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60706300_60711800
ES.19113.3	chr2	-	2295	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	-7	255	-7	-255	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60711789	60582551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.4	chr2	-	2400	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	11	-255	intron_retention	FALSE	canonical	3	131	junction_6	65.5502878459461	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60711771	60582551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.5	chr2	-	2074	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	347	2015	347	-255	multi-exon	FALSE	canonical	3	25	junction_13	80.5716264093541	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60793189	60582551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ES.19113.6	chr2	-	2111	15	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	358	-255	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	91.0514824095665	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60793178	60582551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ES.19113.7	chr2	-	2260	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	-255	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAGTAGGTGTTTT	NA	False	NA	-8	True	AATAAA	-25	NA	60711802	60582551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.8	chr2	-	1981	14	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	13	236	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGCTTGCGAGTGTCGC	NA	False	NA	NA	False	NA	NA	NA	60711801	60582829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19113.9	chr2	-	5020	13	NIC	ENSMUSG00000026970.17	novel	2543	15	NA	NA	12	76	intron_retention	FALSE	canonical	3	229	junction_12	31.3327792504201	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAATTTTCTGGGTATGC	NA	False	NA	NA	False	NA	NA	NA	60711802	60582989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ES.19114.1	chr2	+	4287	8	ISM	ENSMUSG00000064289.16	ENSMUST00000112501.9	2227	9	-41	1071	-21	-990	5prime_fragment	FALSE	canonical	3	6	junction_2	23.5276650011888	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGTCTAAAGTATTG	NA	False	NA	NA	False	ATTAAA	-20	NA	61423399	61483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_61423553_61424340_61424546_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081
ES.19114.10	chr2	+	2249	9	NNC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.5076450330525	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTACGTCGTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	61423495	61484431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61423553_61424340_61424546_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474294_61474650_61474767_61480081_61480633_61483722
ES.19114.11	chr2	+	4382	8	NNC	ENSMUSG00000064289.16	novel	2698	7	NA	NA	6	-241	intron_retention	FALSE	canonical	1	1	junction_7	19.0552365720378	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTATAGGATATTCAA	NA	False	NA	NA	False	ATTAAA	-14	NA	61423514	61484193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480175_61480505
ES.19114.12	chr2	+	1782	7	NIC	ENSMUSG00000064289.16	novel	2039	8	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	19.8130148022848	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTTACGTCGTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	61423521	61484430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474650_61474767_61480081_61480633_61483722
ES.19114.13	chr2	+	2010	8	NNC	ENSMUSG00000064289.16	novel	346	4	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3970332257071	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCATGTCTGATGGGA	NA	False	NA	NA	False	AATAAA	-26	NA	61423574	61484511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61423682_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ES.19114.2	chr2	+	2070	9	NIC	ENSMUSG00000064289.16	novel	2061	10	NA	NA	-20	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	22.4819371941121	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTAAAAGTGACTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	61423400	61484423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61481770_61481874_61483722
ES.19114.3	chr2	+	2009	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	26	4	6	-4	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCATGTCTGATGGGA	NA	False	NA	NA	False	AATAAA	-26	NA	61423446	61484511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ES.19114.4	chr2	+	2124	9	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	19.9874960913067	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACGTCGTGCTTATTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	61423462	61484437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61423553_61424340_61424546_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ES.19114.5	chr2	+	5214	8	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	-17	3	intron_retention	FALSE	canonical	3	6	junction_2	21.0558053461631	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACGTCGTGCTTATTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	61423462	61484437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61423553_61424340_61424546_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081
ES.19114.6	chr2	+	2687	7	FSM	ENSMUSG00000064289.16	ENSMUST00000112494.2	2698	7	5	6	5	-6	multi-exon	FALSE	canonical	3	34	junction_2	10.286182749473	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTATTTCTGCTCTGT	NA	False	NA	NA	False	TATAAA	-8	NA	61423484	61482137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081
ES.19114.7	chr2	+	3846	6	NIC	ENSMUSG00000064289.16	novel	2227	9	NA	NA	11	-987	intron_retention	FALSE	canonical	0	0	junction_1	22.5690052948729	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTCTAAAGTATTGGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	61423490	61483447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61423553_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081
ES.19114.9	chr2	+	3984	7	FSM	ENSMUSG00000064289.16	ENSMUST00000112494.2	2698	7	15	-1301	-13	-990	multi-exon	FALSE	canonical	3	34	junction_2	10.286182749473	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGTCTAAAGTATTG	NA	False	NA	NA	False	ATTAAA	-20	NA	61423494	61483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081
ES.19115.1	chr2	-	2421	2	Antisense	novelGene_ENSMUSG00000064289.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTCAAAATCAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	61428779	61426213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_61427224_61427368
ES.19116.1	chr2	+	1649	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	-107	-1	-107	1	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCGAGGTCTTTTTGG	8440	False	NA	32	True	AATAAA	-18	NA	61541930	61630721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.10	chr2	+	1731	14	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	892.717405937571	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	8611	False	NA	30	True	AATAAA	-16	NA	61542101	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61542218_61546158_61546302_61550787_61550916_61551738_61551851_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.11	chr2	+	1462	12	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	761.810056368037	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCATGTCTCCCGAGGTC	8611	False	NA	25	True	AATAAA	-11	NA	61542101	61630714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61542218_61550790_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594246_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.13	chr2	+	2680	10	ISM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	67	13153	1	-12830	5prime_fragment	FALSE	canonical	3	1717	junction_5	152.128681721985	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGCTACAGCTTTTAA	8614	False	NA	NA	False	NA	NA	NA	61542104	61617567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777
ES.19116.18	chr2	+	1525	13	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	734.821066655005	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCCCGAGGTCTTTT	8624	False	NA	29	True	AATAAA	-15	NA	61542114	61630718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61542218_61550787_61550916_61553053_61553106_61555989_61556053_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.19	chr2	+	1038	7	ISM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	78	35035	-8	433	5prime_fragment	FALSE	canonical	3	1717	junction_5	168.205892352861	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAAGGGCTTTGTTT	8625	False	NA	NA	False	AATAAA	-18	NA	61542115	61595685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192
ES.19116.2	chr2	+	1280	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	-11	272	-11	30	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTGAGTGTATCGTCCT	8536	False	NA	24	True	AATAAA	-24	NA	61542026	61630448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.20	chr2	+	1968	12	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	20	junction_7	578.934986857993	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	8628	False	NA	30	True	AATAAA	-16	NA	61542118	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595853_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.23	chr2	+	1242	10	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	6895	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	617.367249688266	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	NA	False	NA	30	True	AATAAA	-16	NA	61553061	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61553106_61590979_61591052_61591300_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.24	chr2	+	2324	1	Intergenic	novelGene_15859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGAGCAGAGCAGAACA	NA	False	NA	NA	False	NA	NA	NA	61575545	61577869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_61575500_61577900
ES.19116.25	chr2	+	1180	9	ISM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	48940	3	-4752	-3	3prime_fragment	FALSE	canonical	3	1717	junction_2	125.209823895731	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCCGAGGTCTTT	802	False	NA	28	True	AATAAA	-14	NA	61590977	61630717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.26	chr2	+	3224	5	FSM	ENSMUSG00000026914.16	ENSMUST00000125388.2	560	5	-2362	-302	-2362	0	multi-exon	FALSE	canonical	3	1783	junction_1	134.010027609877	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	100	False	NA	31	True	AATAAA	-17	NA	61604559	61630720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.27	chr2	+	1688	1	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	22110	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	2063	False	NA	30	True	AATAAA	-16	NA	61629031	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61629000_61630700
ES.19116.4	chr2	+	1324	10	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	160	junction_1	558.351166105488	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	8583	False	NA	30	True	AATAAA	-16	NA	61542073	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61542218_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.5	chr2	+	1443	11	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	57	junction_2	578.951846011393	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	8592	False	NA	30	True	AATAAA	-16	NA	61542082	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61542218_61550787_61550916_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.6	chr2	+	1575	12	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	573.672985432359	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTCTCCCGAGGTCTT	8596	False	NA	27	True	AATAAA	-13	NA	61542086	61630716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61542218_61550787_61550916_61553053_61553193_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.8	chr2	+	1585	13	NNC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	734.271194791134	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCCGAGGTCTTTTT	8601	False	NA	30	True	AATAAA	-16	NA	61542091	61630719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_61542218_61550787_61550916_61553053_61553106_61589093_61589193_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ES.19116.9	chr2	+	1163	9	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	669.012320047247	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCATGTCTCCCGAGGTC	8610	False	NA	25	True	AATAAA	-11	NA	61542100	61630714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61627738_61627802_61630325
ES.19117.1	chr2	-	417	1	Intergenic	novelGene_15860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	61819177	61818760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_61818800_61819200
ES.19118.1	chr2	-	172	1	Intergenic	novelGene_15861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAAATGCCATACA	NA	False	NA	NA	False	NA	NA	NA	61820692	61820520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_61820500_61820700
ES.19119.1	chr2	-	178	1	Intergenic	novelGene_15862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61838850	61838672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_61838700_61838800
ES.1912.1	chr1	-	1828	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTCATGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	171754770	171752942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171752900_171754800
ES.19120.1	chr2	+	698	2	Intergenic	novelGene_15863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATATTAGCTACCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62241563	62243411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_62241654_62242803
ES.19121.1	chr2	-	5757	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	158	-647	-52	647	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATTCTCTAAGCATG	NA	False	NA	NA	False	AATAAA	-28	NA	62242417	62159769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.10	chr2	-	2173	12	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	52901	1429	-1623	-1429	3prime_fragment	FALSE	canonical	3	227	junction_11	24.620088552452	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATTAGATACATA	NA	False	NA	NA	False	NA	NA	NA	62189674	62161845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620
ES.19121.11	chr2	-	7783	24	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-50	-1554	intron_retention	FALSE	canonical	3	167	junction_10	33.9243570872127	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTATGTCTTGAATCAA	NA	False	NA	2	True	AGTAAA	-25	NA	62242415	62161970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.12	chr2	-	3805	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	-91	1554	-91	-1554	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTATGTCTTGAATCAA	NA	False	NA	2	True	AGTAAA	-25	NA	62242666	62161970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.14	chr2	-	3359	25	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-55	-1557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	60.4086632629975	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGTTATGTCTTGAAT	NA	False	NA	-1	True	AGTAAA	-22	NA	62242258	62161973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191056_62195256_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.15	chr2	-	5673	4	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	62737	1560	-4348	-1560	intron_retention	FALSE	canonical	3	277	junction_2	19.3448241713959	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATGGGTTATGTCTTG	NA	False	NA	-4	True	AGTAAA	-19	NA	62179838	62161976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399
ES.19121.18	chr2	-	3359	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-48	-1561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.8147005342332	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAATGGGTTATGTCTT	NA	False	NA	-5	True	AGTAAA	-18	NA	62242251	62161977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208571_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.20	chr2	-	3297	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	182	-1562	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_25	58.9877817857224	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAATGGGTTATGTCT	NA	False	NA	-6	True	AGTAAA	-17	NA	62242021	62161978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62241984
ES.19121.21	chr2	-	3072	24	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	45	-1603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.3293712816838	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGCCTGGTCATTTA	NA	False	NA	0	True	ATTAAA	-40	NA	62242158	62162019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208654_62209436_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.22	chr2	-	5338	25	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-46	-1611	intron_retention	FALSE	canonical	3	167	junction_11	34.2099065817686	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGGAACTTTGCCTG	NA	False	NA	-8	True	ATTAAA	-32	NA	62242249	62162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.23	chr2	-	3225	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	48	-1611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	59.5444573407131	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGGAACTTTGCCTG	NA	False	NA	-8	True	ATTAAA	-32	NA	62242155	62162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215575_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.24	chr2	-	4900	24	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	53	-1611	intron_retention	FALSE	canonical	0	0	junction_10	78.2650481976225	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGGAACTTTGCCTG	NA	False	NA	-8	True	ATTAAA	-32	NA	62242312	62162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62189065_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62242129
ES.19121.25	chr2	-	3311	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	23	-1611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	59.6375720498412	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGGAACTTTGCCTG	NA	False	NA	-8	True	ATTAAA	-32	NA	62242180	62162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241693_62242129
ES.19121.26	chr2	-	3572	25	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	398	-1611	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	59.6097843385538	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGGAACTTTGCCTG	NA	False	NA	-8	True	ATTAAA	-32	NA	62241805	62162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62241558
ES.19121.28	chr2	-	3229	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-4	-1638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	59.8196756928688	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGTGTTATTATTT	NA	False	NA	-35	True	ATTAAA	-43	NA	62242207	62162054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178887_62182485_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.3	chr2	-	5802	25	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	411	632	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	59.6097843385538	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTCTTTTTTAAATC	NA	False	NA	NA	False	AATAAA	-13	NA	62241792	62159784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62241558
ES.19121.30	chr2	-	3685	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-104	-1642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	58.7542134659294	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGTTTTGTGTTATT	NA	False	NA	-39	True	ATTAAA	-39	NA	62242679	62162058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217460_62241558_62241644_62242129
ES.19121.34	chr2	-	3354	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	47	-1647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	59.8147005342332	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGAGAATGTTTTGTG	NA	False	NA	-44	True	ATTAAA	-34	NA	62242318	62162063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204865_62208551_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.35	chr2	-	3392	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	48	-1647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	74.3236167042482	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGAGAATGTTTTGTG	NA	False	NA	-44	True	ATTAAA	-34	NA	62242155	62162063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182653_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.36	chr2	-	3266	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	76	-1647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.0094772049372	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGAGAATGTTTTGTG	NA	False	NA	-44	True	ATTAAA	-34	NA	62242289	62162063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182592_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.37	chr2	-	3718	25	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	13	-1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	75.5794169327132	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62242562	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62242129
ES.19121.38	chr2	-	3225	25	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-34	-1651	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	58.9122316812618	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62242237	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.40	chr2	-	3308	5	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-2164	-1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	127.401677775452	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62177654	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62176448_62176537
ES.19121.42	chr2	-	3308	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	214	-1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	59.6375720498412	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62241989	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62241852
ES.19121.43	chr2	-	3320	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	53	-1651	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	59.0661188838407	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62242312	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164974_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.44	chr2	-	3126	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	48	-1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.0094772049372	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62242155	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182600_62184892_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.45	chr2	-	3555	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-35	-1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.9044514446913	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62242238	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175740_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.46	chr2	-	4487	8	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	930	-1651	intron_retention	FALSE	canonical	3	241	junction_5	21.3522450188953	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAATGAGAATGTTT	NA	False	NA	-48	True	ATTAAA	-30	NA	62187121	62162067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959
ES.19121.47	chr2	-	3350	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-81	-1652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	75.7860145409428	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTAAATGAGAATGTT	NA	False	NA	-49	True	ATTAAA	-29	NA	62242284	62162068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187057_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216747_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.49	chr2	-	3183	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	48	-1654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	59.7983277358155	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAATTAAATGAGAATG	NA	False	NA	-51	True	ATTAAA	-27	NA	62242155	62162070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190690_62190956_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.5	chr2	-	4934	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	326	8	-46	-8	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACATACCAAAACACA	NA	False	NA	NA	False	AATAAA	-10	NA	62242249	62160424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.51	chr2	-	3666	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	-54	1656	-54	-1656	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGGAAAATTAAATGAGAA	NA	False	NA	-53	True	ATTAAA	-25	NA	62242629	62162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.52	chr2	-	3528	26	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-2	-1666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	75.4478468877675	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCTTTTTAATGGAAAAT	NA	False	NA	-63	True	ATTAAA	-15	NA	62242577	62162082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178870_62182494_62182661_62184899_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.56	chr2	-	2728	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	263	2277	53	2123	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTATGCATAGATTTC	NA	False	NA	NA	False	TATAAA	-11	NA	62242312	62162693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.57	chr2	-	3183	26	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	46	1250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3390259441457	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATGTTACAGATATAAG	NA	False	NA	NA	False	AATAAA	-20	NA	62242157	62163566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163961_62164013_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.59	chr2	-	2937	26	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	-48	909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3390259441457	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACTTTCTTAACTGTTT	NA	False	NA	NA	False	TATAAA	-5	NA	62242251	62163907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163958_62164009_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.60	chr2	-	3470	24	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	-49	-7196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.9522571242001	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGCTTTTGTCTC	NA	False	NA	NA	False	AATAAA	-24	NA	62242624	62172012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62172960_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.61	chr2	-	2566	24	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	-3	-7199	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	58.7787495517367	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGAGCCTGTGCTTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	62242206	62172015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62172477_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.62	chr2	-	2837	24	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	-45	-7453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.9522571242001	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTAAAGGTTCCCAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	62242248	62172269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62172960_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.63	chr2	-	4365	1	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-7792	3582	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGAACGAAAATTTCCACT	NA	False	NA	NA	False	AGTAAA	-11	NA	62195843	62191478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62191500_62195800
ES.19121.64	chr2	-	2496	12	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	336	31247	-36	3397	5prime_fragment	FALSE	canonical	3	201	junction_2	25.651832857042	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCATGTAATCATTTTC	NA	False	NA	NA	False	TTTAAA	-21	NA	62242239	62191663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.65	chr2	-	8526	1	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	6631	1625	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62201961	62193435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_62193400_62202000
ES.19121.66	chr2	-	1145	10	NNC	ENSMUSG00000035000.9	novel	1012	8	NA	NA	48	716	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3818270742933	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATGTTATTTTTTGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	62242155	62203882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62204252_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.67	chr2	-	2366	7	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	-34	319	intron_retention	FALSE	canonical	2	6	junction_3	94.0419528130339	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGAGTTTCAGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	62242237	62204279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62204871_62208547_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.68	chr2	-	882	9	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	420	44187	48	-5	5prime_fragment	FALSE	canonical	3	219	junction_8	22.5596431709369	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAACAGCTTTCTCTGA	NA	False	NA	NA	False	AATGAA	-16	NA	62242155	62204603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.69	chr2	-	6683	2	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	274	74716	64	2913	5prime_fragment	FALSE	canonical	3	219	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATGTAAGGCAGGACAAA	NA	False	NA	NA	False	NA	NA	NA	62242301	62235132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_62241644_62242129
ES.19121.7	chr2	-	4712	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	139	417	-71	-417	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCACAAGTTTTACTG	NA	False	NA	NA	False	AATAAA	-20	NA	62242436	62160833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19121.8	chr2	-	4598	25	NNC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	560	-423	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_22	59.6097843385538	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTCATAGCACAAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	62241643	62160839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216575_62216867_62217408_62217505_62241558
ES.19121.9	chr2	-	3687	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	286	1295	76	-1295	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTATGGAATTCATAA	NA	False	NA	NA	False	NA	NA	NA	62242289	62161711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ES.19122.1	chr2	+	3064	7	NIC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	-34	-126	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	103.484969386326	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCTTTTTTAAATGT	NA	False	NA	2	True	AATAAA	-14	NA	62494594	62524327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_62494804_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.10	chr2	+	4291	8	NNC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	1	1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.5102297092935	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTAGGATTTACTGGA	NA	False	NA	NA	False	ATTAAA	-39	NA	62494629	62525487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516692_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.11	chr2	+	966	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	6	2358	6	1320	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTTTTTATTTGGAA	NA	False	NA	NA	False	NA	NA	NA	62494634	62522095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.12	chr2	+	5521	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	6	-2197	6	2197	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATTCCATGCTACATT	NA	False	NA	NA	False	AATAAA	-29	NA	62494634	62526650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.13	chr2	+	2638	8	NNC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	8	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.5102297092935	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTTGTATCATACAAA	NA	False	NA	12	True	AATAAA	-20	NA	62494636	62523841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516692_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.14	chr2	+	2469	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	8	853	8	-853	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACACATTGTCCTCTGA	NA	False	NA	NA	False	AATAGA	-13	NA	62494636	62523600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.15	chr2	+	1635	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	9	1686	9	-1686	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCCCAGGTAACCTAAAA	NA	False	NA	NA	False	ACTAAA	-36	NA	62494637	62522767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.16	chr2	+	3175	8	NNC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	17	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.4678544873754	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTTTTAAATGTTCT	NA	False	NA	5	True	AATAAA	-17	NA	62494645	62524330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62494804_62502620_62502795_62509499_62509555_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.17	chr2	+	4339	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	26	-1035	26	1035	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGGATTTACTGGAC	NA	False	NA	NA	False	ATTAAA	-40	NA	62494654	62525488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.18	chr2	+	3063	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	42	225	42	-225	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTGTGATAGTTCTTTA	NA	False	NA	-97	True	ATTAAA	-14	NA	62494670	62524228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.19	chr2	+	967	7	NIC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	48	1537	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	103.484969386326	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTACAAGTTATACTT	NA	False	NA	NA	False	GATAAA	-16	NA	62494676	62522312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_62494804_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.2	chr2	+	2766	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	-27	591	-27	-591	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTACATATATACTGCA	NA	False	NA	33	True	AATAAA	-41	NA	62494601	62523862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.21	chr2	+	1585	8	NNC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	141	-1713	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5759254349647	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGATGCTTTTCTCTTTC	NA	False	NA	NA	False	ACTAAA	-9	NA	62494769	62522740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62494913_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.22	chr2	+	6116	5	ISM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	16117	2358	-5796	1320	3prime_fragment	FALSE	canonical	3	236	junction_3	28.5394463856607	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTTTTTATTTGGAA	NA	False	NA	NA	False	NA	NA	NA	62510745	62522095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.23	chr2	+	7159	5	ISM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	17309	123	-4604	-123	3prime_fragment	FALSE	canonical	3	236	junction_3	28.5394463856607	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTTTTAAATGTTCT	NA	False	NA	5	True	AATAAA	-17	NA	62511937	62524330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.24	chr2	+	4125	6	NNC	ENSMUSG00000026893.5	novel	382	3	NA	NA	-2260	-615	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.143836210467	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTTTTGTATCATAC	NA	False	NA	9	True	AATAAA	-17	NA	62514281	62523838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62516111_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.25	chr2	+	3403	5	ISM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	20573	615	-1340	-615	3prime_fragment	FALSE	canonical	3	236	junction_3	28.5394463856607	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGTTTTGTATCATAC	NA	False	NA	9	True	AATAAA	-17	NA	62515201	62523838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.26	chr2	+	3707	1	Genic_Genomic	ENSMUSG00000026893.5	novel	NA	NA	NA	NA	6647	2442	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTGGTCTTGTGCCTT	NA	False	NA	NA	False	TATAAA	-16	NA	62523188	62526895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_62523200_62526900
ES.19122.3	chr2	+	3248	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	-27	109	-27	-109	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTTCTGTTTGACAA	NA	False	NA	19	True	AATAAA	-31	NA	62494601	62524344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.4	chr2	+	5246	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	-13	-1903	-13	1903	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATTTTTCATGTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	62494615	62526356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.5	chr2	+	2728	8	NNC	ENSMUSG00000026893.5	novel	3330	8	NA	NA	-1	-612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.819976498186	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTTGTATCATACAAA	NA	False	NA	12	True	AATAAA	-20	NA	62494627	62523841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520725_62520794_62521907
ES.19122.6	chr2	+	1188	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	1	2141	1	1537	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTACAAGTTATACTT	NA	False	NA	NA	False	GATAAA	-16	NA	62494629	62522312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.7	chr2	+	4206	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	1	-877	1	877	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGATTTAATTGTCTGC	NA	False	NA	NA	False	AATATA	-20	NA	62494629	62525330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19122.8	chr2	+	1796	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	1	1533	1	-1533	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGCCTCTGTTAACT	NA	False	NA	NA	False	TATAAA	-10	NA	62494629	62522920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ES.19123.1	chr2	-	3224	16	NNC	ENSMUSG00000026896.15	novel	5470	16	NA	NA	-18287	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.711805216802088	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTATGGTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	62494886	62427793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_62428433_62428522_62428614_62429129_62429321_62431733_62431896_62433763_62433914_62435784_62436045_62436524_62436801_62437316_62437441_62439528_62439646_62440784_62441003_62442053_62442265_62447604_62447829_62453736_62453842_62465399_62465547_62469673_62469843_62494746
ES.19124.1	chr2	+	209	1	Intergenic	novelGene_15864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACTGTCTAAACATGA	NA	False	NA	NA	False	NA	NA	NA	62877601	62877810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_62877600_62877800
ES.19125.1	chr2	-	3274	1	Intergenic	novelGene_15865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGTTATGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	63378873	63375599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_63375600_63378900
ES.19126.1	chr2	+	3023	1	Intergenic	novelGene_15866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTGACCAAGTAGGT	NA	False	NA	NA	False	NA	NA	NA	63438037	63441060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_63438000_63441100
ES.19127.1	chr2	-	4752	4	NNC	ENSMUSG00000075324.14	novel	3988	4	NA	NA	4	734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCTGTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	63928350	63806946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_63811244_63926657_63926778_63927238_63927409_63928185
ES.19128.1	chr2	-	503	1	Intergenic	novelGene_15867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGAAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	64305083	64304580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_64304600_64305100
ES.19129.1	chr2	+	156	1	Intergenic	novelGene_15868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	AATACA	-7	NA	64697387	64697543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_64697400_64697500
ES.1913.1	chr1	+	180	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	171815361	171815541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171815400_171815500
ES.19130.1	chr2	-	4397	5	ISM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	101818	2	-3649	-2	3prime_fragment	FALSE	canonical	2	4	junction_2	2.1650635094611	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTCGTGTTCTTGTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	64751308	64742821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542
ES.19130.2	chr2	-	2010	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	-33	9	-33	-9	multi-exon	FALSE	canonical	1	2	junction_8	3.05182068075037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGACTCGTGTTC	NA	False	NA	NA	False	ATTAAA	-8	NA	64853159	64742828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
ES.19131.1	chr2	-	174	1	Intergenic	novelGene_15869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGGGAGAGAGAGAGGT	NA	False	NA	NA	False	NA	NA	NA	64877254	64877080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_64877100_64877300
ES.19132.1	chr2	-	4846	14	NNC	ENSMUSG00000034903.19	novel	4917	13	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.5191090506255	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTTCCCGTGTAGCC	NA	False	NA	NA	False	AATAAA	-22	NA	65069393	64918691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981509_65068706_65068831_65069326
ES.19132.3	chr2	-	5127	14	FSM	ENSMUSG00000034903.19	ENSMUST00000112429.9	5045	14	-95	13	0	-2	multi-exon	FALSE	canonical	0	0	junction_10	1.27794213275663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGTTGTTTCCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	65069065	64918695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
ES.19132.4	chr2	-	4455	14	NNC	ENSMUSG00000034903.19	novel	5045	14	NA	NA	7	-415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1.27794213275663	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACATTGTGGCAGTTATT	NA	False	NA	NA	False	NA	NA	NA	65068811	64919108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956648_64963922_64964152_64966688_64966891_64981322_64981509_65068706
ES.19132.5	chr2	-	1576	3	ISM	ENSMUSG00000034903.19	ENSMUST00000090896.10	4867	13	139892	858	7178	-858	3prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTTTTTTTTTTTCCT	NA	False	NA	NA	False	AATGAA	-14	NA	64929025	64919551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_64919902_64926031_64926209_64927976
ES.19133.1	chr2	+	181	1	Intergenic	novelGene_15870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65150283	65150464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_65150300_65150500
ES.19133.2	chr2	+	365	1	Intergenic	novelGene_15871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	65150285	65150650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_65150300_65150600
ES.19134.1	chr2	-	2746	2	Intergenic	novelGene_15872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTCACTTCCAGCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	65261482	65258355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65260993_65261373
ES.19135.1	chr2	+	5018	1	Antisense	novelGene_ENSMUSG00000057182.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCCACAAGTCAGACCG	NA	False	NA	NA	False	NA	NA	NA	65354627	65359645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_65354600_65359600
ES.19136.1	chr2	-	8325	26	NIC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	-21	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_17	3.19849964827261	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGAACTCTTCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	65397857	65288606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338709_65339007_65344815_65345107_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609
ES.19136.10	chr2	-	6450	26	NIC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	-21	-1785	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	2.92684130078828	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTTTCTCCAGTAATC	NA	False	NA	NA	False	TATAAA	-18	NA	65397857	65290391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609
ES.19136.11	chr2	-	4501	10	NIC	ENSMUSG00000057182.16	novel	9560	27	NA	NA	6110	3003	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	4.08550584685561	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATCCAATTATGCCAA	NA	False	NA	NA	False	AATAAA	-32	NA	65345129	65310482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338658_65339007_65344815
ES.19136.12	chr2	-	4209	20	NIC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	2	1130	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	2.5437991523357	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCAACAAAGCCTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	65397834	65312355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338709_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609
ES.19136.13	chr2	-	4011	20	NNC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	3486	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	3.40359920299468	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAATGAAACAA	NA	False	NA	NA	False	NA	NA	NA	65394350	65312377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338805_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65394205
ES.19136.14	chr2	-	1747	6	NNC	ENSMUSG00000057182.16	novel	1284	7	NA	NA	6252	742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.96386945839634	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTTTCTAATTACT	NA	False	NA	NA	False	AATAAA	-13	NA	65344987	65327251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338796_65339007_65344815
ES.19136.15	chr2	-	3526	17	NNC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	-1178	741	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	3.35177191944798	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGGTTTCTAATTAC	NA	False	NA	NA	False	AATAAA	-12	NA	65399149	65327252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338805_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609_65397752_65399051
ES.19136.16	chr2	-	3003	1	NIC	ENSMUSG00000057182.16	novel	9560	27	NA	NA	3894	10749	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTGATAAACTTGGCT	NA	False	NA	NA	False	NA	NA	NA	65347345	65344342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65344300_65347300
ES.19136.3	chr2	-	8413	27	NNC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.02651008813938	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGGTGAACTCTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	65397827	65288608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338796_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609
ES.19136.4	chr2	-	6008	14	NIC	ENSMUSG00000057182.16	novel	9560	27	NA	NA	21	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	4.26350968016954	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTGGTGAACTCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	65397815	65288610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65356840_65356970_65366756_65367071_65397609
ES.19136.6	chr2	-	6389	16	NIC	ENSMUSG00000057182.16	novel	9560	27	NA	NA	6121	-180	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	3.40326640482672	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATTTGTTGGACTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	65345118	65288786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65344815
ES.19136.7	chr2	-	8348	27	NIC	ENSMUSG00000057182.16	novel	8550	27	NA	NA	33	-181	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	3.02651008813938	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGATTTGTTGGACTGA	NA	False	NA	NA	False	AATAAA	-22	NA	65397803	65288787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338658_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65397609
ES.19136.8	chr2	-	5775	15	ISM	ENSMUSG00000057182.16	ENSMUST00000100069.9	8550	27	60180	659	-8848	-659	3prime_fragment	FALSE	canonical	2	6	junction_6	2.52841000291827	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGATTTCTTTGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	65337791	65289265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490
ES.19137.1	chr2	+	177	1	Intergenic	novelGene_15873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAACCCTGG	NA	False	NA	NA	False	NA	NA	NA	65487769	65487946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_65487800_65487900
ES.19138.1	chr2	-	2674	3	Antisense	novelGene_ENSMUSG00000075318.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACATTGGTATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	65614741	65593729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_65594916_65604041_65604151_65613362
ES.19139.1	chr2	-	135	1	Intergenic	novelGene_15874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65635639	65635504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65635500_65635600
ES.1914.1	chr1	+	5545	3	Antisense	novelGene_ENSMUSG00000026556.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAACC	NA	False	NA	NA	False	AGTAAA	-14	NA	171835889	171842365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_171836213_171837009_171840515_171840648
ES.19140.1	chr2	-	177	1	Intergenic	novelGene_15875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGCTGAG	NA	False	NA	NA	False	NA	NA	NA	65673850	65673673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65673700_65673800
ES.19141.1	chr2	+	2451	7	NNC	ENSMUSG00000044647.17	novel	10672	7	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.27309733985213	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTATTTTATTTAT	5680	False	NA	12	True	AAAAAG	-11	NA	65676187	65853827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_65676229_65690955_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19141.10	chr2	+	6071	1	ISM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	176685	3024	73503	2916	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTGAATTATAGAC	6954	False	NA	NA	False	ATTAAA	-13	NA	65852795	65858866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_65852800_65858900
ES.19141.2	chr2	+	10431	6	FSM	ENSMUSG00000044647.17	ENSMUST00000053910.10	4495	6	2	-5938	-1	-2	multi-exon	FALSE	canonical	2	6	junction_1	3.18747549010185	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTTATTGCGTTTTTA	5680	False	NA	9	True	AGTAAA	-17	NA	65676187	65861888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_65676229_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19141.3	chr2	+	2532	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	77	8063	-1	-1	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTATTTTATTTAT	5680	False	NA	12	True	AAAAAG	-11	NA	65676187	65853827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19141.4	chr2	+	4030	8	NNC	ENSMUSG00000044647.17	novel	10672	7	NA	NA	-1	-819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.65324541068839	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTTGGGTTTGTCATGC	5680	False	NA	NA	False	AATAAA	-29	NA	65676187	65855131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_65676229_65690874_65691037_65708308_65708397_65739802_65739997_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19141.5	chr2	+	3833	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	77	6762	-1	-822	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTTGGGTTTGTCA	5680	False	NA	NA	False	AATAAA	-26	NA	65676187	65855128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19141.6	chr2	+	2970	1	Intergenic	novelGene_15876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTAGTAACCCTGTCAT	7662	False	NA	NA	False	NA	NA	NA	65678169	65681139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_65678200_65681100
ES.19141.7	chr2	+	5354	1	NIC	ENSMUSG00000044647.17	novel	2566	5	NA	NA	137	-12084	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65762345	65767699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_65762300_65767700
ES.19141.8	chr2	+	10291	6	NNC	ENSMUSG00000044647.17	novel	2566	5	NA	NA	167	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.63560112144215	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGTAGCTGTTATTGC	NA	False	NA	2	True	AGTAAA	-10	NA	65762375	65861881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_65762533_65779302_65779474_65832646_65832907_65849783_65850081_65852314_65861170_65861330
ES.19141.9	chr2	+	3696	5	FSM	ENSMUSG00000044647.17	ENSMUST00000145598.9	2566	5	169	-1299	169	-823	multi-exon	FALSE	canonical	2	3	junction_1	4.32290411644765	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGACTTTGGGTTTGTC	NA	False	NA	NA	False	AATAAA	-25	NA	65762377	65855127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_65762533_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ES.19142.1	chr2	-	1878	1	Intergenic	novelGene_15877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65720633	65718755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65718800_65720600
ES.19143.1	chr2	-	3917	1	Intergenic	novelGene_15878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCATACCAGGAAACAAAAT	NA	False	NA	NA	False	ATTAAA	-29	NA	65742120	65738203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65738200_65742100
ES.19144.1	chr2	-	175	1	Intergenic	novelGene_15879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	65745119	65744944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65744900_65745100
ES.19145.1	chr2	-	2585	1	Intergenic	novelGene_15880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-30	NA	65804409	65801824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_65801800_65804400
ES.19146.1	chr2	-	3206	11	FSM	ENSMUSG00000026994.10	ENSMUST00000028378.4	3885	11	8	671	8	649	multi-exon	FALSE	canonical	1	2	junction_3	1.86815416922694	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAATGGTTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	65955330	65913780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_65914637_65915580_65915734_65921238_65921341_65921505_65921638_65923874_65924076_65925544_65925663_65926133_65926369_65928056_65928207_65932788_65932962_65937193_65937817_65954867
ES.19146.2	chr2	-	7407	2	NIC	ENSMUSG00000026994.10	novel	573	3	NA	NA	-4238	908	intron_retention	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTAGTAGGCACAGCG	NA	False	NA	NA	False	NA	NA	NA	65937065	65925076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65928207_65932788
ES.19146.3	chr2	-	2422	5	NIC	ENSMUSG00000026994.10	novel	3885	11	NA	NA	258	879	intron_retention	FALSE	canonical	2	6	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	65955080	65925105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_65926369_65928056_65928207_65932788_65932962_65937193_65937817_65954867
ES.19147.1	chr2	+	4721	2	Antisense	novelGene_ENSMUSG00000034848.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCAAGCG	NA	False	NA	NA	False	NA	NA	NA	66034717	66040557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_66037880_66038998
ES.19148.1	chr2	+	560	3	Antisense	novelGene_ENSMUSG00000034848.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAAAAAAACCTC	NA	False	NA	NA	False	AATAAA	-22	NA	66049540	66057489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_66049650_66050890_66050943_66057090
ES.19149.1	chr2	-	4500	29	FSM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	-31	1	-31	-1	multi-exon	TRUE	canonical	1	2	junction_7	6.12653562590721	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTTATATTTTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	66086992	66014671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
ES.19149.2	chr2	-	3032	12	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	22	45166	22	1307	5prime_fragment	FALSE	canonical	2	5	junction_4	7.6515001500003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	66086914	66060152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
ES.19149.3	chr2	-	985	4	ISM	ENSMUSG00000034848.18	ENSMUST00000125446.3	4061	28	4587	57563	-2595	-11090	internal_fragment	FALSE	canonical	2	9	junction_3	4.32049379893857	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGTTGAATTGCATC	NA	False	NA	NA	False	AATAAA	-17	NA	66082349	66072549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_66073133_66077651_66077775_66079738_66079906_66082237
ES.1915.1	chr1	-	3155	1	Genic_Genomic	ENSMUSG00000026556.16	novel	NA	NA	NA	NA	6657	1742	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	171829939	171826784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_171826800_171829900
ES.1915.11	chr1	-	5658	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	38	2	11	-2	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTCTGTTGC	NA	False	NA	-9	True	AATAAA	-13	NA	171854824	171828528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.14	chr1	-	5538	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGGGGTTTTCTGTTGC	NA	False	NA	-9	True	AATAAA	-13	NA	171854825	171828528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831310_171831430_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.15	chr1	-	5052	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-10	-548	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTCTTAGTCCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	171854872	171829074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831387_171831494_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.16	chr1	-	4322	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	7	-1226	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTGGTATCTTCGTC	NA	False	NA	NA	False	NA	NA	NA	171854828	171829752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831309_171831424_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.17	chr1	-	4097	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	-2	1603	-2	-1603	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	171854864	171830129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.18	chr1	-	3917	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-31	-1603	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	171854893	171830129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831293_171831501_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.19	chr1	-	3988	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	4	-1630	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	171854858	171830156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831410_171831485_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.2	chr1	-	5584	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTCTGTTGCTT	NA	False	NA	-7	True	AATAAA	-15	NA	171854858	171828526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831315_171831424_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.21	chr1	-	3868	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	4	-1630	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	171854858	171830156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831309_171831504_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.22	chr1	-	3920	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-7	-1665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2294265253357	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCCTTGGGTAATGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	171854869	171830191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831337_171831456_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.23	chr1	-	3510	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	4	1404	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTAAATTATTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	171854858	171830591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831313_171831431_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.24	chr1	-	3311	7	ISM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	13964	2075	-4302	1394	3prime_fragment	FALSE	canonical	3	70	junction_3	9.15453742990631	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTAGACACCTTTAA	8647	False	NA	NA	False	AGTAAA	-9	NA	171840898	171830601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649
ES.1915.25	chr1	-	2305	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	-12	3405	-12	64	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCCTGCCCTCCAATT	NA	False	NA	-4	True	GATAAA	-21	NA	171854874	171831931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.26	chr1	-	5488	6	NIC	ENSMUSG00000026556.16	novel	5698	8	NA	NA	7	54	intron_retention	FALSE	canonical	3	78	junction_5	7.50999334220743	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTGGGAACCACCCTG	NA	False	NA	-14	True	GATAAA	-11	NA	171854828	171831941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171832430_171833656_171833889_171835477_171836211_171837007_171840516_171840649_171840913_171854564
ES.1915.27	chr1	-	2164	8	NNC	ENSMUSG00000026556.16	novel	5698	8	NA	NA	3	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.2083191420728	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAATACCTGGGAACCA	NA	False	NA	-19	True	GATAAA	-6	NA	171854832	171831946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840829_171854564
ES.1915.28	chr1	-	2232	8	NNC	ENSMUSG00000026556.16	novel	5698	8	NA	NA	-183	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.2083191420728	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAATACCTGGGAACCA	NA	False	NA	-19	True	GATAAA	-6	NA	171854461	171831946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840861_171854157
ES.1915.3	chr1	-	5585	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTCTGTTGCTT	NA	False	NA	-7	True	AATAAA	-15	NA	171854869	171828526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831337_171831456_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.4	chr1	-	5836	8	NIC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-357	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	31.2083191420728	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	NA	False	NA	-8	True	AATAAA	-14	NA	171856368	171828527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171855931
ES.1915.5	chr1	-	5463	10	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	197	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.9932243723819	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	NA	False	NA	-8	True	AATAAA	-14	NA	171854638	171828527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831337_171831456_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171850043_171850154_171854564
ES.1915.6	chr1	-	5121	8	NNC	ENSMUSG00000026556.16	novel	5698	8	NA	NA	-4242	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.2083191420728	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	8707	False	NA	-8	True	AATAAA	-14	NA	171840838	171828527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831301_171831504_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649
ES.1915.7	chr1	-	5590	9	NNC	ENSMUSG00000026556.16	novel	2349	9	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	NA	False	NA	-8	True	AATAAA	-14	NA	171854862	171828527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831391_171831497_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.1915.9	chr1	-	5600	9	NNC	ENSMUSG00000026556.16	novel	6528	9	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2294265253357	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGGGTTTTCTGTTGCT	NA	False	NA	-8	True	AATAAA	-14	NA	171854873	171828527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171831375_171831482_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ES.19150.1	chr2	+	167	1	Intergenic	novelGene_15881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAATAAGTGAGGAA	NA	False	NA	NA	False	NA	NA	NA	66186231	66186398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_66186200_66186400
ES.19151.1	chr2	+	197	1	Intergenic	novelGene_15882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATAGCTCTCTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	66466270	66466467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_66466300_66466500
ES.19152.1	chr2	-	177	1	Intergenic	novelGene_15883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	66618767	66618590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_66618600_66618800
ES.19153.1	chr2	-	170	1	Intergenic	novelGene_15884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	66988553	66988383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_66988400_66988600
ES.19154.1	chr2	+	1180	1	Intergenic	novelGene_15885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATTTCACTGTTTCCTT	5422	False	NA	NA	False	AATAAA	-23	NA	67675611	67676791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_67675600_67676800
ES.19155.1	chr2	-	1739	1	Intergenic	novelGene_15886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	68040171	68038432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_68038400_68040200
ES.19156.1	chr2	+	2330	1	Intergenic	novelGene_15888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68217501	68219831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_68217500_68219800
ES.19157.1	chr2	+	818	1	Intergenic	novelGene_15890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	68238863	68239681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_68238900_68239700
ES.19158.1	chr2	-	3691	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	-157	2	-157	1	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGAGTCTCCTCCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	68302769	68040790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.2	chr2	-	3167	17	NIC	ENSMUSG00000027030.16	novel	3536	18	NA	NA	-63	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	14.1287329138179	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCGAGTCTCCTCCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	68302347	68040790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.3	chr2	-	2114	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	127	1295	127	0	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGCACTCCGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	68302485	68042083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.4	chr2	-	1818	16	NIC	ENSMUSG00000027030.16	novel	3536	18	NA	NA	-63	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.8210061136963	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	68302347	68042119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_68042338_68051247_68051313_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.5	chr2	-	2160	17	NIC	ENSMUSG00000027030.16	novel	3536	18	NA	NA	-18	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	14.5768437941826	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	68302630	68042119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.6	chr2	-	2584	17	NNC	ENSMUSG00000027030.16	novel	2038	16	NA	NA	-75	13897	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.1673866238626	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	68302359	68079237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_68080153_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.7	chr2	-	1771	16	FSM	ENSMUSG00000027030.16	ENSMUST00000123781.8	2038	16	-75	342	-75	-342	multi-exon	FALSE	canonical	3	28	junction_9	9.19323422716704	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACAATCTTCATAAAT	NA	False	NA	NA	False	NA	NA	NA	68302359	68093476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ES.19158.8	chr2	-	3148	1	Intergenic	novelGene_15887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGAAGTCATCACTTT	NA	False	NA	NA	False	NA	NA	NA	68123271	68120123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_68120100_68123300
ES.19158.9	chr2	-	156	1	Intergenic	novelGene_15889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8001	False	NA	NA	False	NA	NA	NA	68225036	68224880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_68224900_68225000
ES.19159.1	chr2	+	1239	1	FSM	ENSMUSG00000075312.5	ENSMUST00000121239.2	375	1	-14	-850	-14	850	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGGTTTAATAAGTC	NA	False	NA	NA	False	AATAAA	-44	NA	68384884	68386123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_68384900_68386100
ES.1916.1	chr1	-	205	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTTCCAGAACACCACA	NA	False	NA	NA	False	NA	NA	NA	171859701	171859496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171859500_171859700
ES.19160.1	chr2	+	172	1	Intergenic	novelGene_15891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGGCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	68643524	68643696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_68643500_68643700
ES.19161.1	chr2	+	4331	9	ISM	ENSMUSG00000027035.11	ENSMUST00000176018.2	1279	11	-468	674	-323	-674	intron_retention	TRUE	canonical	3	48	junction_8	6.78232998312527	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGAATTAAATATAGAATG	NA	False	NA	NA	False	NA	NA	NA	68691461	68938314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346
ES.19161.10	chr2	+	1780	1	Intergenic	novelGene_15892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCCCAGCCATCCTTT	NA	False	NA	NA	False	NA	NA	NA	68812897	68814677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_68812900_68814700
ES.19161.11	chr2	+	5552	2	Genic_Genomic	ENSMUSG00000102662.2	novel	3772	1	NA	NA	2161	4032	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTGTGTGTGTCTAA	5467	False	NA	NA	False	NA	NA	NA	68850600	68856243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_68851106_68851196
ES.19161.12	chr2	+	2019	7	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	86348	1002	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.1108319357027	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAACCCCTTGCCTTCC	1534	False	NA	NA	False	AATAAA	-17	NA	68876602	68939990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68876880_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
ES.19161.13	chr2	+	6389	7	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	88212	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.591260281974	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATGAGTGTCCTTTAT	507	False	NA	4	True	AATAAA	-17	NA	68878466	68944625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68878634_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943469_68943572
ES.19161.14	chr2	+	6277	7	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	88221	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.6108791453587	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	516	False	NA	5	True	AATAAA	-18	NA	68878475	68944626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68878634_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943365_68943572
ES.19161.2	chr2	+	6945	11	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_8	6.39140047250992	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691773	68944626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943469_68943572
ES.19161.3	chr2	+	3274	8	NNC	ENSMUSG00000027035.11	novel	1134	8	NA	NA	0	10643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.1646529031191	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTTTGAAAACCACTGG	NA	False	NA	NA	False	NA	NA	NA	68691793	68912528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68901675_68901783_68910156
ES.19161.4	chr2	+	6821	11	NNC	ENSMUSG00000027035.11	novel	1279	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.4759302878096	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGTGTCCTTTATTGT	NA	False	NA	7	True	AATAAA	-20	NA	68691795	68944628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943365_68943572
ES.19161.5	chr2	+	6582	9	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	25.3940814954981	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691795	68944626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68692150_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943365_68943572
ES.19161.6	chr2	+	6647	10	NNC	ENSMUSG00000027035.11	novel	7038	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.8774775427271	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691810	68944626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68938785_68943365_68943572
ES.19161.7	chr2	+	6083	2	FSM	ENSMUSG00000027035.11	ENSMUST00000141983.2	673	2	-1	-5409	-1	5409	multi-exon	FALSE	canonical	3	58	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68691812	68770604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_68692150_68764858
ES.19161.8	chr2	+	4800	2	FSM	ENSMUSG00000027035.11	ENSMUST00000141983.2	673	2	6	-4133	6	4133	multi-exon	FALSE	canonical	3	58	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCACAGGCCACAGAAACA	NA	False	NA	NA	False	NA	NA	NA	68691819	68769328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_68692150_68764858
ES.19161.9	chr2	+	6772	11	NNC	ENSMUSG00000027035.11	novel	400	4	NA	NA	-14021	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.379608265684	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATGAGTGTCCTTTAT	NA	False	NA	4	True	AATAAA	-17	NA	68763582	68944625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68763787_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785_68943469_68943572
ES.19162.1	chr2	-	168	1	Antisense	novelGene_ENSMUSG00000103233.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATTGAACAAGCT	NA	False	NA	NA	False	NA	NA	NA	68724236	68724068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_68724100_68724200
ES.19163.1	chr2	-	2671	1	Antisense	novelGene_ENSMUSG00000027035.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGAAACATGGATTT	NA	False	NA	NA	False	NA	NA	NA	68939358	68936687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_68936700_68939400
ES.19164.1	chr2	+	1762	16	NNC	ENSMUSG00000034738.9	novel	1808	16	NA	NA	43	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.596284793999944	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTTATGGGTTCCTA	2918	False	NA	NA	False	AATAAA	-21	NA	68966186	69019669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005848_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ES.19165.1	chr2	+	5523	2	Antisense	novelGene_ENSMUSG00000005233.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3278	False	NA	NA	False	NA	NA	NA	69026278	69034283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_69030434_69032915
ES.19165.2	chr2	+	2795	3	Antisense	novelGene_ENSMUSG00000005233.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGGACCTACAAATATG	3278	False	NA	NA	False	NA	NA	NA	69026278	69034306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_69027574_69030324_69030434_69032915
ES.19165.3	chr2	+	1642	1	Antisense	novelGene_ENSMUSG00000005233.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCTGAAGAAAGTAAAAA	1183	False	NA	NA	False	NA	NA	NA	69032626	69034268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_69032600_69034300
ES.19166.1	chr2	-	4332	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-22	-2958	-22	2958	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTCCCAACTTGAAATT	NA	False	NA	1	True	AATAAA	-17	NA	69036560	69021280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19166.10	chr2	-	4079	6	NIC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	811	junction_5	37.8872010050888	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036515	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69024890_69027478_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19166.11	chr2	-	1779	7	NNC	ENSMUSG00000005233.17	novel	1527	7	NA	NA	10	0	intron_retention	FALSE	canonical	2	4	junction_6	324.604759669355	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036491	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69035932
ES.19166.12	chr2	-	1316	7	NNC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	326.090691202446	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTTGTAACTCTCTCT	NA	False	NA	-12	True	NA	NA	NA	69036544	69024240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036447
ES.19166.14	chr2	-	6785	5	NIC	ENSMUSG00000005233.17	novel	685	7	NA	NA	60	-9	intron_retention	FALSE	canonical	3	49	junction_4	355.918881207502	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTCCCAGTCTTTGTAA	NA	False	NA	-20	True	NA	NA	NA	69036407	69024248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ES.19166.15	chr2	-	1192	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-14	174	-14	-173	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGGAAGTCAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	69036552	69024412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19166.16	chr2	-	3230	3	ISM	ENSMUSG00000005233.17	ENSMUST00000149401.2	570	4	-956	778	8	-778	5prime_fragment	FALSE	canonical	3	822	junction_1	36	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAATCTCTGGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	69036515	69031044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_69033063_69035199_69035266_69035369
ES.19166.17	chr2	-	5396	2	NIC	ENSMUSG00000005233.17	novel	570	4	NA	NA	-6	-778	intron_retention	FALSE	canonical	3	894	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAATCTCTGGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	69036544	69031044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69035266_69035369
ES.19166.18	chr2	-	4496	3	NIC	ENSMUSG00000005233.17	novel	1869	5	NA	NA	-5	-778	intron_retention	FALSE	canonical	3	811	junction_2	41.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAATCTCTGGTTTAGA	NA	False	NA	NA	False	NA	NA	NA	69036529	69031044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69035266_69035369_69035523_69036407
ES.19166.19	chr2	-	5479	1	Genic_Genomic	ENSMUSG00000005233.17	novel	NA	NA	NA	NA	-6	-799	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69036544	69031065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_69031100_69036500
ES.19166.2	chr2	-	4451	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	33	-2957	21	2957	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTCCCAACTTGAAAT	NA	False	NA	0	True	AATAAA	-16	NA	69036446	69021281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ES.19166.20	chr2	-	167	1	Intergenic	novelGene_15893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAAAATAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	69035065	69034898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69034900_69035100
ES.19166.3	chr2	-	4592	8	NNC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	-5	2955	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	392.052370512524	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTTCCCAACTTGAA	NA	False	NA	-2	True	AATAAA	-14	NA	69036529	69021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69035932_69036227_69036407
ES.19166.4	chr2	-	1557	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	-22	-8	0	8	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCTCTTCAGTATGAC	NA	False	NA	-2	True	NA	NA	NA	69036501	69024230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ES.19166.5	chr2	-	1393	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-34	-7	-34	7	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCTCTTCAGTATGA	NA	False	NA	-3	True	NA	NA	NA	69036572	69024231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19166.6	chr2	-	1254	6	NIC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	343.043204276079	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036546	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69024890_69027478_69027578_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19166.7	chr2	-	2258	6	ISM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	-22	1	-22	0	intron_retention	FALSE	canonical	3	822	junction_4	28.5194670356934	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036560	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369
ES.19166.8	chr2	-	1363	8	NIC	ENSMUSG00000005233.17	novel	1527	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	382.063356216303	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036497	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173_69036227_69036407
ES.19166.9	chr2	-	3901	6	NIC	ENSMUSG00000005233.17	novel	1352	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	811	junction_5	33.8171554096438	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	False	NA	-11	True	NA	NA	NA	69036499	69024239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ES.19167.1	chr2	-	177	1	Intergenic	novelGene_15894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69038584	69038407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69038400_69038600
ES.19168.1	chr2	+	1907	6	NNC	ENSMUSG00000005232.12	novel	1892	5	NA	NA	-617	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAACCCACTGGATTAC	4721	False	NA	NA	False	AATAAA	-9	NA	69040799	69058180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69040997_69041353_69041499_69050520_69050595_69051126_69051237_69053275_69053388_69056911
ES.19169.1	chr2	-	6729	35	ISM	ENSMUSG00000027070.15	ENSMUST00000080953.12	15460	79	107475	-3	30555	3	3prime_fragment	FALSE	canonical	0	0	junction_13	1.59258663184481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTGGGTCTCTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	69308934	69254680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_69256148_69256314_69256387_69258936_69259066_69260606_69260709_69261418_69261549_69262260_69262379_69262526_69262595_69263345_69263437_69265346_69265467_69266911_69267089_69267766_69267988_69268685_69268815_69270115_69270282_69271629_69271774_69273089_69273222_69274023_69274156_69278458_69278588_69281605_69281729_69284135_69284274_69285153_69285271_69285803_69285921_69287166_69287287_69288715_69288845_69289817_69290064_69290684_69290882_69291600_69291779_69294917_69295142_69295932_69296104_69296548_69296702_69297108_69297626_69299716_69300013_69302689_69302892_69305723_69305856_69307353_69307477_69308915
ES.19169.3	chr2	-	6293	38	NNC	ENSMUSG00000027070.15	novel	15460	79	NA	NA	27820	-1183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1.62522123009437	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGAAGGTGTGTCGTG	NA	False	NA	NA	False	TATAAA	-26	NA	69311669	69255866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69256148_69256314_69256387_69258936_69259066_69260606_69260709_69261418_69261549_69262260_69262379_69262526_69262595_69263345_69263437_69265346_69265467_69266911_69267089_69267771_69267988_69268685_69268815_69270115_69270282_69271629_69271774_69273089_69273222_69274023_69274156_69278458_69278588_69281605_69281729_69284135_69284274_69285153_69285271_69285803_69285921_69287166_69287287_69288715_69288845_69289817_69290064_69290684_69290882_69291600_69291779_69294917_69295142_69295932_69296104_69296548_69296702_69297108_69297626_69299716_69300013_69302689_69302892_69305723_69305856_69307353_69307477_69308915_69309042_69309442_69309686_69310359_69310564_69311468
ES.1917.1	chr1	-	699	2	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACTGTGTGTATGTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	171870277	171865442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171866052_171870187
ES.1917.2	chr1	-	608	2	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGGTTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	171870296	171865552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171866052_171870187
ES.19170.1	chr2	+	228	1	Intergenic	novelGene_15895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAAAGATGAAGGGGCA	4024	False	NA	NA	False	NA	NA	NA	69398518	69398746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69398500_69398700
ES.19171.1	chr2	-	3294	17	NNC	ENSMUSG00000027070.15	novel	4359	25	NA	NA	-22900	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.39194109070751	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCATTAATATCTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69362389	69336545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69337101_69338108_69338226_69338311_69338432_69339476_69339723_69340686_69340969_69341273_69341412_69343590_69343722_69344480_69344607_69346734_69346928_69348652_69348857_69350257_69350399_69352062_69352266_69353489_69353697_69354264_69354489_69355504_69355675_69357859_69357989_69362281
ES.19171.2	chr2	-	4358	25	FSM	ENSMUSG00000027070.15	ENSMUST00000100051.9	4359	25	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	1.25761568939888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTCATTAATATCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69416372	69336547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69337101_69338108_69338226_69338311_69338432_69339476_69339723_69340686_69340969_69341273_69341412_69343590_69343722_69344480_69344607_69346734_69346928_69348652_69348857_69350257_69350399_69352062_69352266_69353489_69353697_69354264_69354489_69355504_69355675_69357859_69357989_69363796_69363917_69365252_69365403_69366328_69366446_69367858_69367973_69368294_69368406_69379283_69379401_69381173_69381297_69382696_69382805_69416158
ES.19172.1	chr2	+	177	1	Intergenic	novelGene_15896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATGCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69431530	69431707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69431500_69431700
ES.19173.1	chr2	+	182	1	Intergenic	novelGene_15897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	69435726	69435908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69435700_69435900
ES.19174.1	chr2	+	226	1	Intergenic	novelGene_15898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGACCACATGTGAGACT	NA	False	NA	NA	False	NA	NA	NA	69468587	69468813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69468600_69468800
ES.19175.1	chr2	+	330	1	Intergenic	novelGene_15899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69473795	69474125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69473800_69474100
ES.19176.1	chr2	+	256	1	Intergenic	novelGene_15900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGAGCATGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	69476057	69476313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69476100_69476300
ES.19177.1	chr2	+	1483	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	-17	2	-17	-2	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATGTTTTGAAAGTAT	NA	False	NA	4	True	AATAAA	-18	NA	69477534	69497913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ES.19177.2	chr2	+	3938	9	NIC	ENSMUSG00000063145.11	novel	1468	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	79	junction_5	8.51377560192891	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATGTTTTGAAAGTAT	NA	False	NA	4	True	AATAAA	-18	NA	69477552	69497913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69477687_69479365_69479449_69483125_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ES.19177.3	chr2	+	2715	10	NIC	ENSMUSG00000063145.11	novel	1468	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	79	junction_3	8.95392871906924	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATGTTTTGAAAGTA	NA	False	NA	3	True	AATAAA	-17	NA	69477559	69497912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ES.19177.5	chr2	+	263	1	Intergenic	novelGene_15901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTTATTGCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	69489254	69489517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69489300_69489500
ES.19178.1	chr2	-	152	1	Intergenic	novelGene_15902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAACAAAGGAAGGAAA	NA	False	NA	2	True	NA	NA	NA	69507782	69507630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69507600_69507800
ES.19179.1	chr2	+	214	1	Intergenic	novelGene_15903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATTTACAGGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	69518672	69518886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69518700_69518900
ES.1918.1	chr1	+	288	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTTTGGGCAGGATT	NA	False	NA	NA	False	GGGGCT	-43	NA	171879016	171879304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171879000_171879300
ES.19180.1	chr2	+	1079	1	Intergenic	novelGene_15904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAACAAAAACAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	69522260	69523339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69522300_69523300
ES.19181.1	chr2	+	5738	1	Antisense	novelGene_ENSMUSG00000027086.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACCTCACCATCAATGG	NA	False	NA	NA	False	NA	NA	NA	69527692	69533430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_69527700_69533400
ES.19182.1	chr2	+	3105	1	Antisense	novelGene_ENSMUSG00000027086.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTTAAAATATAACATTAT	NA	False	NA	NA	False	NA	NA	NA	69539241	69542346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_69539200_69542300
ES.19183.1	chr2	-	4497	14	NNC	ENSMUSG00000027086.17	novel	2414	5	NA	NA	33	3190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.8634259460432	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGTGTCTTTGTCAC	7106	False	NA	NA	False	AATAAA	-31	NA	69543809	69513968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69515068_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.10	chr2	-	2578	15	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	87.8923564738744	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAATGACTATGG	7065	False	NA	NA	False	NA	NA	NA	69543850	69517169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535744_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470_69542540_69543736
ES.19183.11	chr2	-	2581	16	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	82	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	84.8461090576476	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAATGACTATGG	7155	False	NA	NA	False	NA	NA	NA	69543760	69517169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69539646_69539761_69541837_69541907_69542470_69542540_69543736
ES.19183.12	chr2	-	2835	15	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	26	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	75.3197605315538	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7099	False	NA	NA	False	NA	NA	NA	69543816	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470_69542862_69543736
ES.19183.13	chr2	-	3613	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	144	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.8589986362466	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7217	False	NA	NA	False	NA	NA	NA	69543698	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535744_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.14	chr2	-	7363	11	NIC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	7	-21	intron_retention	FALSE	canonical	0	0	junction_9	66.4680374315355	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7062	False	NA	NA	False	NA	NA	NA	69543853	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69538981_69541837_69541907_69542470
ES.19183.15	chr2	-	4663	13	NNC	ENSMUSG00000027086.17	novel	2511	14	NA	NA	27	-21	intron_retention	FALSE	canonical	0	0	junction_11	78.9508901504952	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7100	False	NA	NA	False	NA	NA	NA	69543815	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532793_69533194_69534596_69535877_69537651_69538051_69538854_69538981_69541833_69541907_69542470
ES.19183.16	chr2	-	2494	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	-6	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	77.5812610815648	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7049	False	NA	NA	False	NA	NA	NA	69543866	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69543736
ES.19183.17	chr2	-	3813	15	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	37	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	75.1531769122237	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7110	False	NA	NA	False	NA	NA	NA	69543805	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69539646_69539761_69541837_69541907_69542470
ES.19183.18	chr2	-	3479	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	-8	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.1193897393883	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	7065	False	NA	NA	False	NA	NA	NA	69543850	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69537786_69538854_69538981_69541837_69541907_69542470
ES.19183.19	chr2	-	2302	12	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	4445	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	64.4338343439568	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	69538360	69517179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538227
ES.19183.2	chr2	-	3614	14	FSM	ENSMUSG00000027086.17	ENSMUST00000102706.4	2511	14	-969	-134	68	12	multi-exon	FALSE	canonical	0	0	junction_12	76.1245475885547	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATATATATATTTACTTA	7141	False	NA	NA	False	NA	NA	NA	69543774	69517146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532793_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.20	chr2	-	3740	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	-8	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.6823299000373	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTTAAAAAA	7065	False	NA	NA	False	NA	NA	NA	69543850	69517183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520524_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538975_69541833_69541907_69542470
ES.19183.21	chr2	-	2195	7	ISM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-481	15638	411	2632	5prime_fragment	FALSE	canonical	0	0	junction_5	73.1681852537927	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCGCGTCTTTTCTTTC	7484	False	NA	NA	False	AATAGA	-17	NA	69543431	69532796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.3	chr2	-	3804	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	-939	0	-29	0	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7026	False	NA	NA	False	NA	NA	NA	69543889	69517158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.5	chr2	-	3543	13	NIC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	214	0	intron_retention	FALSE	canonical	0	0	junction_11	60.9445900433792	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	8324	False	NA	NA	False	NA	NA	NA	69542591	69517158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ES.19183.6	chr2	-	4801	13	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_11	60.9445900433792	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7065	False	NA	NA	False	NA	NA	NA	69543850	69517158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69535877_69537651_69538051_69538854_69538981_69541838_69541907_69542470
ES.19183.7	chr2	-	4197	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	77.2385071207913	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7079	False	NA	NA	False	NA	NA	NA	69543836	69517158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542024
ES.19183.8	chr2	-	3867	9	NIC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	4637	-11	intron_retention	FALSE	canonical	3	176	junction_8	20.5045726607506	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAATGACTATGG	NA	False	NA	NA	False	NA	NA	NA	69538168	69517169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69535877_69537651
ES.19183.9	chr2	-	2235	14	NNC	ENSMUSG00000027086.17	novel	2865	14	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	90.1023743850432	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAATGACTATGG	7062	False	NA	NA	False	NA	NA	NA	69543853	69517169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69537795_69538854_69538981_69541837_69541907_69543736
ES.19184.1	chr2	+	2753	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	-12	3386	-12	1078	multi-exon	TRUE	canonical	3	282	junction_1	41.7748260879032	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTGTGCTATGTTAA	NA	False	NA	NA	False	AATAAA	-34	NA	69553136	69580970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.10	chr2	+	6107	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	107.971835030082	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553157	69584354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573965_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.11	chr2	+	6203	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553160	69584354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.12	chr2	+	6038	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	106.582877246874	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	69553169	69584356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.13	chr2	+	8094	11	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-24	1065	intron_retention	FALSE	canonical	3	282	junction_1	45.9517137874095	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553173	69580957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69579442_69579615
ES.19184.14	chr2	+	2668	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-20	1064	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	112.037289179392	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553177	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.15	chr2	+	1858	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	1054	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.179850828988	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553178	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615_69580078_69580906
ES.19184.16	chr2	+	5535	13	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	1054	intron_retention	FALSE	canonical	0	0	junction_12	109.835830775855	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553178	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69579438_69579608
ES.19184.17	chr2	+	5555	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	-632	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATTGCCATTACTG	NA	False	NA	NA	False	AATAAA	-18	NA	69553178	69583724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.18	chr2	+	3643	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	2178	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	111.86931239422	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACCTGCCTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	69553178	69582070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69576371_69576460_69579304_69579442_69579615
ES.19184.19	chr2	+	3911	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	2188	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553178	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.2	chr2	+	6141	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	-12	-2	-12	2	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTGCTTTTTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	69553136	69584358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.20	chr2	+	2676	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-17	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	107.650871149153	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553180	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571838_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.21	chr2	+	5539	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-16	1064	intron_retention	FALSE	canonical	3	282	junction_1	43.390587176893	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553181	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69579442_69579615
ES.19184.22	chr2	+	6055	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-16	-9	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	112.037289179392	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	69553181	69584347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.23	chr2	+	2624	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-14	1064	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	106.582877246874	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553183	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.24	chr2	+	2691	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-13	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	109.149590636404	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553184	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574135_69576371_69576460_69579304_69579442_69579615
ES.19184.26	chr2	+	6587	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	126.877813631213	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	69553184	69584356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.27	chr2	+	3110	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-252	3387	-13	1077	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTGTGTGCTATGTTA	NA	False	NA	NA	False	AATAAA	-33	NA	69553184	69580969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.28	chr2	+	1851	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-12	1052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.179850828988	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGAAAAACAACACTT	NA	False	NA	NA	False	AATAAA	-8	NA	69553185	69580944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615_69580086_69580912
ES.19184.29	chr2	+	3746	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-12	2188	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	106.582877246874	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553185	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.3	chr2	+	3850	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	1	2276	1	2188	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553149	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.30	chr2	+	6153	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-11	64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	141.678108367286	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAAATGTAAATTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	69553186	69584420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566209_69566242_69566332_69566453_69571811_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.31	chr2	+	2678	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-7	34818	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.179850828988	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTTTTTAGAAGTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	69553190	69619174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615_69580932_69619156
ES.19184.32	chr2	+	6161	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.526388744138	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	69553190	69584347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553296_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573955_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.33	chr2	+	3776	13	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-6	2188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	144.746017983992	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553191	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562797_69563161_69563270_69563532_69563578_69564634_69564723_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.34	chr2	+	6139	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.994100629359	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGGGATTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	69553195	69584353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69561862_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.36	chr2	+	3793	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	19	2188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	109.149590636404	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553216	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574135_69576371_69576460_69579304_69579442_69579615
ES.19184.37	chr2	+	2608	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	20	1054	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	163.371613273753	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553217	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579184_69579233_69579324_69579442_69579615
ES.19184.39	chr2	+	3603	13	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	21	2188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	111.742356188988	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553218	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566500_69573953_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.4	chr2	+	5495	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	1	631	1	-631	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGCCATTACTGC	NA	False	NA	NA	False	AATAAA	-19	NA	69553149	69583725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.40	chr2	+	2410	12	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-19	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	114.692690364907	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553227	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574122_69579615
ES.19184.41	chr2	+	2994	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-59	1064	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	126.877813631213	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553377	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.42	chr2	+	6291	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-48	2	-48	-2	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553388	69584354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.43	chr2	+	4016	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-47	2276	-47	2188	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCCTCATTTGAGAAATA	NA	False	NA	NA	False	AATAAA	-27	NA	69553389	69582080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.44	chr2	+	2750	15	NNC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-47	1064	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.368224807827	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553389	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553447_69553588_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.45	chr2	+	2902	14	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-45	1054	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	141.755018278369	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69553391	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553708_69561834_69561925_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.46	chr2	+	5655	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-45	635	-45	-635	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTTGATTGCCATTA	NA	False	NA	NA	False	AATAAA	-15	NA	69553391	69583721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.48	chr2	+	2888	14	NNC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-37	1064	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	135.407428147916	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGGTGTAATACT	NA	False	NA	NA	False	AATAAA	-20	NA	69553399	69580956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571823_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.49	chr2	+	6349	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	152.241282716829	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	69553402	69584356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579324_69579442_69579615
ES.19184.5	chr2	+	5295	15	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	105.179850828988	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553149	69584354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615_69580078_69580906
ES.19184.50	chr2	+	3377	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	-34	2902	-34	1562	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTGTAATTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	69553402	69581454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.51	chr2	+	4081	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	-30	2180	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	126.877813631213	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAAACCTGCCTCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	69553406	69582072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.54	chr2	+	171	1	Intergenic	novelGene_15905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAGACTTAT	NA	False	NA	NA	False	NA	NA	NA	69557765	69557936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69557800_69557900
ES.19184.55	chr2	+	194	1	Intergenic	novelGene_15906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTATTGAGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	69558733	69558927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69558700_69558900
ES.19184.56	chr2	+	2773	15	NIC	ENSMUSG00000042133.17	novel	658	9	NA	NA	-18	1054	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	127.994100629359	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69559517	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69559637_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.57	chr2	+	4505	14	NNC	ENSMUSG00000042133.17	novel	548	9	NA	NA	542	1054	intron_retention	TRUE	non_canonical	0	0	junction_1	107.362461898245	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69560077	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69561273_69561343_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.58	chr2	+	6058	14	NIC	ENSMUSG00000042133.17	novel	801	10	NA	NA	-320	-9	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	91.4428071651812	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	69561831	69584347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.59	chr2	+	2560	14	NNC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	-30	1054	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	142.445463455919	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69562121	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579184_69579233_69579324_69579442_69579615
ES.19184.6	chr2	+	5953	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	111.86931239422	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGATTGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69553152	69584354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69576371_69576460_69579304_69579442_69579615
ES.19184.60	chr2	+	6139	7	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	962	1054	intron_retention	FALSE	canonical	3	344	junction_1	37.9184065534874	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69563530	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69579442_69579615
ES.19184.61	chr2	+	5474	6	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	12895	9	250	-9	3prime_fragment	FALSE	canonical	3	349	junction_3	34.342975992188	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	69566331	69584347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.62	chr2	+	5388	6	NNC	ENSMUSG00000042133.17	novel	675	5	NA	NA	-2667	2178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.753819730174	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAAACCTGCCTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	69569345	69582070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69570081_69570232_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19184.63	chr2	+	5075	4	NIC	ENSMUSG00000042133.17	novel	675	5	NA	NA	-481	1054	intron_retention	FALSE	canonical	3	349	junction_2	40.3347107202827	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACAACACTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	69571531	69580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69572038_69573956_69574125_69576371_69579442_69579615
ES.19184.64	chr2	+	171	1	Intergenic	novelGene_15907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCATT	NA	False	NA	NA	False	NA	NA	NA	69573056	69573227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69573100_69573200
ES.19184.65	chr2	+	4958	3	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	22934	9	4358	-9	3prime_fragment	FALSE	canonical	3	368	junction_1	38	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAATTTGGGATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	69576370	69584347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69576460_69579304_69579442_69579615
ES.19184.7	chr2	+	2815	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	5	1067	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGTAATACTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	69553153	69580959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ES.19185.1	chr2	-	3306	1	FSM	ENSMUSG00000082345.2	ENSMUST00000120658.2	433	1	-2811	-62	-2811	62	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAATTTCA	NA	False	NA	NA	False	AATAAA	-44	NA	69570944	69567638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69567600_69570900
ES.19185.2	chr2	-	2472	2	Genic_Genomic	ENSMUSG00000082345.2	novel	433	1	NA	NA	-2165	31	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	69570298	69567669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_69570105_69570261
ES.19186.1	chr2	-	1846	9	FSM	ENSMUSG00000070883.4	ENSMUST00000094942.4	1844	9	-2	0	-2	0	multi-exon	FALSE	canonical	2	3	junction_5	1.58113883008419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTTTGATTCTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	69619921	69588376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69588810_69592065_69592231_69602275_69602469_69606473_69606614_69608403_69608561_69611982_69612177_69612288_69612463_69617503_69617731_69619758
ES.19186.2	chr2	-	1536	8	NIC	ENSMUSG00000070883.4	novel	1844	9	NA	NA	81	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	2.32115382989599	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTTTGATTCTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	69619838	69588376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69588810_69592065_69592231_69602275_69602469_69606473_69606614_69608403_69608561_69611982_69612177_69612288_69612463_69619758
ES.19186.3	chr2	-	1597	8	NIC	ENSMUSG00000070883.4	novel	1844	9	NA	NA	54	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2.0303814862217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTTTGATTCTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	69619865	69588376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69588810_69592065_69592231_69606473_69606614_69608403_69608561_69611982_69612177_69612288_69612463_69617503_69617731_69619758
ES.19187.1	chr2	+	2200	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	-7	1	7	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCTTCTGAAATCTTT	NA	False	NA	25	True	AATAAA	-15	NA	69619986	69627566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
ES.19187.2	chr2	+	2251	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	8	1	-6	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCTTCTGAAATCTTT	NA	False	NA	25	True	AATAAA	-15	NA	69619987	69627566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ES.19187.3	chr2	+	1262	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	8	990	-6	580	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATTGAAAGGTGTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	69619987	69626577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ES.19187.5	chr2	+	2092	4	NIC	ENSMUSG00000027088.11	novel	2194	4	NA	NA	-2	-57	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	41.6839963961657	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAACAAAAAGCCTGA	NA	False	NA	-32	True	AATAAA	-18	NA	69620001	69627509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69620249_69620629_69620666_69622716_69622836_69625819
ES.19187.6	chr2	+	2122	4	NIC	ENSMUSG00000027088.11	novel	2194	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	41.6839963961657	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTCTTCTGAAATC	NA	False	NA	22	True	AATAAA	-12	NA	69620005	69627563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69620249_69620629_69620666_69622736_69622836_69625819
ES.19187.7	chr2	+	1334	5	NNC	ENSMUSG00000027088.11	novel	2260	4	NA	NA	4	577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.780184433816	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACAATTGAAAGGTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	69620007	69626574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69620301_69620629_69620666_69620890_69620986_69622680_69622836_69625819
ES.19187.8	chr2	+	1180	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	27	987	17	583	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAAGGTGTATTAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	69620020	69626580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
ES.19187.9	chr2	+	5042	3	ISM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	200	2	124	-1	intron_retention	FALSE	canonical	3	95	junction_2	5.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCTTCTGAAATCTT	NA	False	NA	24	True	AATAAA	-14	NA	69620179	69627565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69620301_69620629_69620666_69622680
ES.19188.1	chr2	+	3891	4	NIC	ENSMUSG00000042155.4	novel	653	2	NA	NA	-8	-577	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.94392028877595	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAACTTTAATTGTAGG	5038	False	NA	NA	False	AATAAA	-17	NA	69652279	69666418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69652404_69654130_69655345_69659189_69659343_69664018
ES.19188.2	chr2	+	411	2	ISM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	121	12606	121	-278	5prime_fragment	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGAAGGCCTTGTAAA	5593	False	NA	NA	False	AATAAA	-23	NA	69652834	69654389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69652987_69654130
ES.19188.3	chr2	+	3915	4	FSM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	130	572	130	-572	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAATTGTAGGCTATT	5602	False	NA	NA	False	AATAAA	-22	NA	69652843	69666423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69652987_69654130_69655345_69659189_69659343_69664018
ES.19188.4	chr2	+	4120	4	NNC	ENSMUSG00000042155.4	novel	4617	4	NA	NA	270	-573	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.63299316185545	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTAATTGTAGGCTAT	5742	False	NA	NA	False	AATAAA	-21	NA	69652983	69666422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69653333_69654130_69655345_69659189_69659343_69664018
ES.19188.5	chr2	+	4822	3	ISM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	367	572	367	-572	3prime_fragment	FALSE	canonical	3	9	junction_1	1	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAATTGTAGGCTATT	5839	False	NA	NA	False	AATAAA	-22	NA	69653080	69666423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69655345_69659189_69659343_69664018
ES.19188.6	chr2	+	3216	4	NNC	ENSMUSG00000042155.4	novel	839	2	NA	NA	417	-1330	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.63299316185545	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAACTTTTAAGAAGA	5889	False	NA	NA	False	AATAAA	-15	NA	69653130	69665665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69653333_69654130_69655345_69659189_69659343_69664018
ES.19188.7	chr2	+	455	1	Intergenic	novelGene_15908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTTCCGTGTGCCTT	8653	False	NA	NA	False	NA	NA	NA	69655894	69656349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69655900_69656300
ES.19188.8	chr2	+	248	1	Intergenic	novelGene_15909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTCAAGAGTTATATT	NA	False	NA	NA	False	NA	NA	NA	69657378	69657626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69657400_69657600
ES.19189.1	chr2	-	149	1	Intergenic	novelGene_15910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	69659979	69659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69659800_69660000
ES.1919.1	chr1	+	6209	2	Antisense	novelGene_ENSMUSG00000003458.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	171892323	171898634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_171896221_171896322
ES.19190.1	chr2	+	177	1	Intergenic	novelGene_15911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69667468	69667645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69667500_69667600
ES.19191.1	chr2	+	203	1	Intergenic	novelGene_15912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTACAGCTCAATGAC	NA	False	NA	NA	False	AAGAAA	-4	NA	69668794	69668997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69668800_69669000
ES.19192.1	chr2	-	181	1	Intergenic	novelGene_15913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAGTTAGAAAAATAA	NA	False	NA	NA	False	AATAAA	-11	NA	69675722	69675541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69675500_69675700
ES.19193.1	chr2	+	1746	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	-11	266	-11	10	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTCTTTTTATTTCTC	NA	False	NA	24	True	TATAAA	-15	NA	69691894	69701864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.10	chr2	+	2080	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	28	-107	28	47	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTGTTTCTGATGTT	NA	False	NA	69	True	NA	NA	NA	69691933	69702237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.12	chr2	+	3905	10	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	29	3	intron_retention	FALSE	canonical	3	167	junction_8	520.882963561293	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTCTTTCTTCTTTTT	NA	False	NA	17	True	TATAAA	-8	NA	69691934	69701857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69700365_69700728_69700925_69701024_69701178_69701465
ES.19193.13	chr2	+	1717	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	29	342	29	-6	multi-exon	FALSE	canonical	3	62	junction_1	503.342431457735	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCCAATAGTTCTTT	NA	False	NA	8	True	AATATA	-10	NA	69691934	69701848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.14	chr2	+	1751	11	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-22	-7	intron_retention	FALSE	canonical	3	1543	junction_6	123.916907643792	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691944	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.15	chr2	+	1548	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-21	-120	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	497.726284764482	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTCTGTTTGTGTTTG	NA	False	NA	14	True	AATGAA	-15	NA	69691945	69701734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693584_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.16	chr2	+	6404	10	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	1543	junction_5	118.435897127497	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTCTCACTTTGGACA	NA	False	NA	20	True	ATTAAA	-21	NA	69691945	69702188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.17	chr2	+	1642	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	518.764313752537	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691945	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701057_69701178_69701465
ES.19193.18	chr2	+	4657	8	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-21	-9	intron_retention	FALSE	canonical	3	1543	junction_5	131.223753449548	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTGATATTTCTCACT	NA	False	NA	13	True	ATTAAA	-14	NA	69691945	69702181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69700925_69701021_69701178_69701465
ES.19193.19	chr2	+	9106	3	NIC	ENSMUSG00000068882.14	novel	1563	11	NA	NA	-21	0	intron_retention	FALSE	canonical	3	1819	junction_1	10	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691945	69701854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697007_69697615
ES.19193.2	chr2	+	2097	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-11	42	intron_retention	FALSE	canonical	3	82	junction_1	497.726284764482	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGATGTGGTGTTTCTG	NA	False	NA	64	True	NA	NA	NA	69691894	69702232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693584_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.20	chr2	+	3601	10	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	1543	junction_5	118.399616282328	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTCACTTTGGACAT	NA	False	NA	21	True	ATTAAA	-22	NA	69691947	69702189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.21	chr2	+	3953	9	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-15	-7	intron_retention	FALSE	canonical	3	1543	junction_5	123.160401002108	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691951	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.22	chr2	+	3569	11	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-14	44	intron_retention	FALSE	canonical	3	1543	junction_6	112.445586840925	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGTGGTGTTTCTGAT	NA	False	NA	66	True	NA	NA	NA	69691952	69702234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.23	chr2	+	1687	12	NNC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	515.427111663731	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTCTTTCTTCTTTTT	NA	False	NA	17	True	TATAAA	-8	NA	69691956	69701857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692084_69693584_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.24	chr2	+	6733	8	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	1543	junction_3	131.49563506374	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691956	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.28	chr2	+	1645	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	497.726284764482	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCCAATAGTTCTTT	NA	False	NA	8	True	AATATA	-10	NA	69691962	69701848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693584_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.3	chr2	+	3219	11	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	11	-6	intron_retention	FALSE	canonical	3	1543	junction_6	112.445586840925	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCCAATAGTTCTTT	NA	False	NA	8	True	AATATA	-10	NA	69691916	69701848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.30	chr2	+	1629	11	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	544.885354914224	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691962	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699203_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.31	chr2	+	2022	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	57	9	-4	-9	multi-exon	FALSE	canonical	3	62	junction_1	503.342431457735	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTGATATTTCTCACT	NA	False	NA	13	True	ATTAAA	-14	NA	69691962	69702181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.32	chr2	+	9691	2	NIC	ENSMUSG00000068882.14	novel	666	6	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	1819	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691962	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831
ES.19193.33	chr2	+	6655	9	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	1543	junction_4	123.02210167283	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691962	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.34	chr2	+	4919	7	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	1543	junction_4	139.82926096573	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCAATAGTTCTTTCTT	NA	False	NA	11	True	TATAAA	-2	NA	69691962	69701851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697897_69699122_69699195_69699485_69700925_69701021_69701178_69701465
ES.19193.35	chr2	+	4246	9	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	-4	5	intron_retention	FALSE	canonical	3	1543	junction_6	123.133819481083	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTTCTTCTTTTTAT	NA	False	NA	19	True	TATAAA	-10	NA	69691962	69701859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69700925_69701021_69701178_69701465
ES.19193.36	chr2	+	2485	13	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	1	1876	intron_retention	TRUE	non_canonical	0	0	junction_12	498.610478953484	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	69691967	69704066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465_69702475_69703864
ES.19193.37	chr2	+	1678	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	516.629157085054	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691969	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696807_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.38	chr2	+	2548	9	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	6	-7	intron_retention	FALSE	canonical	2	106	junction_1	570.854608788438	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691972	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69692057_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.39	chr2	+	1538	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	68	395	7	-119	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTCTGTTTGTGTTTGG	NA	False	NA	15	True	AATGAA	-16	NA	69691973	69701735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.4	chr2	+	1998	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	16	-11	intron_retention	FALSE	canonical	0	0	junction_10	518.764313752537	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATCTGATATTTCTCA	NA	False	NA	11	True	ATTAAA	-12	NA	69691921	69702179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701057_69701178_69701465
ES.19193.40	chr2	+	3766	10	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	11	-7	intron_retention	FALSE	canonical	3	1543	junction_5	116.216273482771	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691977	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.41	chr2	+	2822	13	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	19	2231	intron_retention	FALSE	non_canonical	0	0	junction_12	498.610478953484	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCAGTGTTTATTGT	NA	False	NA	NA	False	AATAAA	-41	NA	69691985	69704421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465_69702475_69703864
ES.19193.42	chr2	+	3441	11	NNC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	27	-7	intron_retention	FALSE	canonical	0	0	junction_9	544.083899780172	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGATATTTCTCACTTT	NA	False	NA	15	True	ATTAAA	-16	NA	69691993	69702183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701057_69701178_69701465
ES.19193.44	chr2	+	6661	8	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	79	-16	intron_retention	FALSE	canonical	3	1543	junction_4	131.656944444295	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTGTATAAAAATAGCCA	NA	False	NA	-2	True	NA	NA	NA	69692108	69701838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.45	chr2	+	3589	9	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	203	-1	intron_retention	FALSE	canonical	3	1543	junction_4	123.226354222626	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATAGTTCTTTCTTCT	NA	False	NA	13	True	TATAAA	-4	NA	69692232	69701853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.46	chr2	+	5607	10	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	378	-1	intron_retention	FALSE	canonical	3	1543	junction_5	118.435897127497	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATAGTTCTTTCTTCT	NA	False	NA	13	True	TATAAA	-4	NA	69692407	69701853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.47	chr2	+	539	2	ISM	ENSMUSG00000068882.14	ENSMUST00000132603.2	991	6	1898	7	1898	-7	3prime_fragment	FALSE	canonical	3	2020	junction_1	0	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69701020	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69701178_69701465
ES.19193.48	chr2	+	879	2	ISM	ENSMUSG00000068882.14	ENSMUST00000132603.2	991	6	1898	-333	1898	-3	3prime_fragment	FALSE	canonical	3	2020	junction_1	0	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTCTCACTTTGGAC	NA	False	NA	19	True	ATTAAA	-20	NA	69701020	69702187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69701178_69701465
ES.19193.5	chr2	+	1607	11	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	16	-7	combination_of_known_splicesites	FALSE	canonical	2	106	junction_1	664.34250202738	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCCAATAGTTCTT	NA	False	NA	7	True	AATATA	-9	NA	69691921	69701847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69692057_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701024_69701178_69701465
ES.19193.6	chr2	+	4576	8	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	17	49	intron_retention	FALSE	canonical	3	1709	junction_4	95.956410171813	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTTTCTGATGTTTT	NA	False	NA	71	True	NA	NA	NA	69691922	69702239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697897_69699122_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.7	chr2	+	4907	7	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	21	0	intron_retention	FALSE	canonical	3	1543	junction_5	88.9633195323906	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691926	69701854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697724_69697795_69697897_69699122_69699195_69699485_69700365_69700728
ES.19193.8	chr2	+	3284	10	NIC	ENSMUSG00000068882.14	novel	1563	11	NA	NA	24	0	intron_retention	FALSE	canonical	3	1543	junction_5	118.399616282328	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691929	69701854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19193.9	chr2	+	6156	9	NIC	ENSMUSG00000068882.14	novel	2088	12	NA	NA	24	-2	intron_retention	FALSE	canonical	3	1543	junction_4	125.506971917898	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAATAGTTCTTTCTTC	NA	False	NA	12	True	TATAAA	-3	NA	69691929	69701852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ES.19194.1	chr2	+	235	1	Intergenic	novelGene_15914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAATGATGCTTTATAG	NA	False	NA	NA	False	NA	NA	NA	69705014	69705249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69705000_69705200
ES.19195.1	chr2	-	1007	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	-34	-5	-34	5	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCTTTTCTTATGCT	6772	False	NA	0	True	AATAAA	-39	NA	69715993	69701536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.10	chr2	-	7460	6	NNC	ENSMUSG00000051730.16	novel	851	6	NA	NA	2	-301	intron_retention	TRUE	non_canonical	0	0	junction_2	269.850625346691	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGCTATTTTTATACA	6826	False	NA	NA	False	AATAAA	-13	NA	69715939	69701862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69702126_69704227_69705007_69705210_69706483_69706696_69707848_69708107_69711756_69715592
ES.19195.11	chr2	-	3589	5	NNC	ENSMUSG00000051730.16	novel	2090	4	NA	NA	5	1725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.232385208395	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTTGCTGATTAATAT	6829	False	NA	NA	False	AATAAA	-16	NA	69715936	69706366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69706483_69706696_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.12	chr2	-	1551	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	0	539	0	-539	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTAGGTCTGTGTCT	6817	False	NA	NA	False	NA	NA	NA	69715948	69708630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.13	chr2	-	1114	4	FSM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	-190	1166	-179	-1166	multi-exon	FALSE	canonical	3	529	junction_1	42.2926313518876	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGATTGATTTTCAT	6627	False	NA	NA	False	NA	NA	NA	69716138	69709257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.14	chr2	-	676	3	ISM	ENSMUSG00000051730.16	ENSMUST00000135487.2	2090	4	4	2992	-3	-2992	5prime_fragment	FALSE	canonical	3	609	junction_2	8.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATAGAGCAGTGAT	6821	False	NA	NA	False	AATAAA	-29	NA	69715944	69711083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_69711293_69711640_69711756_69715592
ES.19195.2	chr2	-	4481	7	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	210.516362520562	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTCTTTTCTTATGC	6814	False	NA	-1	True	AATAAA	-38	NA	69715951	69701537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69701661_69702075_69702126_69704227_69706489_69708137_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.4	chr2	-	896	6	NIC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	228.92933407495	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCACCATTTTCTCTTTT	6823	False	NA	-8	True	AATAAA	-31	NA	69715942	69701544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_69701661_69702075_69702126_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ES.19195.5	chr2	-	3480	5	NNC	ENSMUSG00000051730.16	novel	316	3	NA	NA	-3581	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	231.580844415077	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	5531	False	NA	-25	True	AATAAA	-14	NA	69707975	69701561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69701661_69702075_69702126_69704227_69705008_69705210_69706483_69706696
ES.19195.6	chr2	-	995	7	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	236.160079889327	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6796	False	NA	-25	True	AATAAA	-14	NA	69715969	69701561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711106_69711326_69711640_69711756_69715592
ES.19195.7	chr2	-	1048	8	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	252.80620955949	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6816	False	NA	-25	True	AATAAA	-14	NA	69715949	69701561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69701661_69702075_69702126_69703613_69703691_69704227_69704280_69709445_69709529_69711110_69711326_69711640_69711756_69715592
ES.19195.8	chr2	-	844	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	3	4	3	0	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6827	False	NA	-25	True	AATAAA	-14	NA	69715938	69701561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ES.19195.9	chr2	-	926	7	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	207.389327915718	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAACTACTTGTCTCTA	6822	False	NA	-25	True	AATAAA	-14	NA	69715943	69701561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709523_69711110_69711293_69711640_69711756_69715592
ES.19196.1	chr2	+	823	1	NIC	ENSMUSG00000085735.2	novel	667	2	NA	NA	114	-1491	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGCAAGATACAAGATAC	NA	False	NA	NA	False	NA	NA	NA	69716185	69717008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69716200_69717000
ES.19197.1	chr2	+	6686	39	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	-63	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	29.3752114390929	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGGCAGAGTTTTGAT	4263	False	NA	NA	False	AATAAA	-21	NA	69727526	69852890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.11	chr2	+	6202	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-43	-54	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_36	27.3747462326492	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTACATTTTTTTCTT	4283	False	NA	13	True	AGTAAA	-18	NA	69727546	69852510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850872_69851005_69851455_69851596_69851886
ES.19197.12	chr2	+	6647	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	-41	1466	-41	2	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGCAGAGTTTTGATT	4285	False	NA	NA	False	AATAAA	-22	NA	69727548	69852891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.13	chr2	+	8107	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	-39	4	-39	-4	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAATGTTTATGT	4287	False	NA	19	True	AATAAA	-33	NA	69727550	69854353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.14	chr2	+	6026	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	-38	2084	-38	-291	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAGAAATGATTGTCC	4288	False	NA	NA	False	AATAAA	-21	NA	69727551	69852273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.17	chr2	+	8201	40	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_31	37.6037858124594	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAATGTTTATGT	4322	False	NA	19	True	AATAAA	-33	NA	69727585	69854353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69829428_69829563_69830801_69830888_69833702_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.18	chr2	+	8209	40	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_10	33.5677555748471	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAATGTTTATGT	4333	False	NA	19	True	AATAAA	-33	NA	69727596	69854353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69777512_69777649_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.19	chr2	+	6122	38	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	7	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.1816459980384	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTACATTTTTTTCTT	4333	False	NA	13	True	AGTAAA	-18	NA	69727596	69852510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728188_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.2	chr2	+	7758	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-53	-379	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATATTTGATAGTGTT	4273	False	NA	NA	False	NA	NA	NA	69727536	69853978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.20	chr2	+	1978	10	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	8	78708	8	4	5prime_fragment	FALSE	canonical	3	86	junction_2	13.3231442549987	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTTTTGAACAGTTGT	4334	False	NA	NA	False	AATAAA	-23	NA	69727597	69775649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357
ES.19197.22	chr2	+	6685	40	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	33.022276465021	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	4335	False	NA	NA	False	AATAAA	-20	NA	69727598	69852889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69849888_69849979_69850794_69851005_69851455_69851596_69851886
ES.19197.23	chr2	+	6131	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	9	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	36.2717505670277	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	4335	False	NA	11	True	AGTAAA	-16	NA	69727598	69852508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813477_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848735_69848917_69850872_69851005_69851455_69851596_69851886
ES.19197.24	chr2	+	6136	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	10	-55	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_36	27.3220888183192	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	4336	False	NA	12	True	AGTAAA	-17	NA	69727599	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850872_69851005_69851455_69851596_69851886
ES.19197.25	chr2	+	6196	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	14	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	27.7453422509166	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTAGAACTTTACATTT	4340	False	NA	6	True	AGTAAA	-11	NA	69727603	69852503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851894
ES.19197.26	chr2	+	6227	39	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	14	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.3752114390929	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	4340	False	NA	11	True	AGTAAA	-16	NA	69727603	69852508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.28	chr2	+	8030	40	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	15	-55	intron_retention	FALSE	canonical	0	0	junction_29	41.189273033373	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	4341	False	NA	12	True	AGTAAA	-17	NA	69727604	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69777512_69777649_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69829492_69829563_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.29	chr2	+	6573	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.4711228457865	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACATATACATGGCAGA	4341	False	NA	NA	False	AATAAA	-13	NA	69727604	69852882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775365_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784708_69786311_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.3	chr2	+	6337	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	-51	1786	-51	7	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCATTCTCAGGAATT	4275	False	NA	74	True	NA	NA	NA	69727538	69852571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.30	chr2	+	8087	38	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	15	-55	intron_retention	FALSE	non_canonical	3	59	junction_28	21.6987812417575	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	4341	False	NA	12	True	AGTAAA	-17	NA	69727604	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69851005_69851455_69851596_69851886
ES.19197.31	chr2	+	5837	28	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	15	30815	15	-15990	5prime_fragment	FALSE	non_canonical	3	86	junction_2	15.0618295888121	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATTTATGTCTTGGCA	4341	False	NA	NA	False	AATAAA	-19	NA	69727604	69823542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768
ES.19197.32	chr2	+	6204	39	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	16	-55	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	32.341452179608	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	4342	False	NA	12	True	AGTAAA	-17	NA	69727605	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784712_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.33	chr2	+	6115	39	NIC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	16	-157	combination_of_known_junctions	FALSE	non_canonical	3	25	junction_2	26.5792730568894	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTGTGTTGATTTGA	4342	False	NA	-90	True	NA	NA	NA	69727605	69852407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.34	chr2	+	6948	36	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	16	3728	16	-901	5prime_fragment	FALSE	non_canonical	3	59	junction_28	18.9069472168625	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGGCTGTTTGGTTTTT	4342	False	NA	NA	False	AATAAA	-11	NA	69727605	69850629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736
ES.19197.35	chr2	+	6191	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	17	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	38.8161373757826	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	4343	False	NA	11	True	AGTAAA	-16	NA	69727606	69852508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784708_69786311_69786433_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824161_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.37	chr2	+	5104	30	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	17	-9258	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_29	29.6377254210436	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCATGATTGATTATGT	4343	False	NA	NA	False	AATAAA	-26	NA	69727606	69830274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69829566
ES.19197.39	chr2	+	8068	39	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.3752114390929	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGAATGTTTATGTT	4345	False	NA	20	True	AATAAA	-34	NA	69727608	69854354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.4	chr2	+	6657	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.3252488754426	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGGCAGAGTTTTGAT	4280	False	NA	NA	False	AATAAA	-21	NA	69727543	69852890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.40	chr2	+	8052	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.3252488754426	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGAATGTTTATGTT	4349	False	NA	20	True	AATAAA	-34	NA	69727612	69854354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784719_69786315_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.42	chr2	+	7852	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	24	-208	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCCAAGTTAGAGTGAT	4350	False	NA	NA	False	TATAAA	-17	NA	69727613	69854149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.44	chr2	+	5106	30	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-27	-9258	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_29	26.0150875459565	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCATGATTGATTATGT	4356	False	NA	NA	False	AATAAA	-26	NA	69727619	69830274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69829566
ES.19197.48	chr2	+	8189	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	-61	intron_retention	FALSE	non_canonical	2	4	junction_29	32.7899911254264	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTAGAACTTTACATTT	4367	False	NA	6	True	AGTAAA	-11	NA	69727630	69852503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69829428_69829563_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69851005_69851455_69851596_69851886
ES.19197.49	chr2	+	6267	40	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	-53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	33.6933223903715	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTACATTTTTTTCTTA	4367	False	NA	14	True	AGTAAA	-19	NA	69727630	69852511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69829492_69829563_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.5	chr2	+	6042	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-45	-294	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATTGAGAAATGATTG	4281	False	NA	NA	False	AATAAA	-18	NA	69727544	69852270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.50	chr2	+	7046	32	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	-5265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	35.7813629047517	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTTGGCTCATATA	4367	False	NA	NA	False	NA	NA	NA	69727630	69834267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69777649_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784594_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69833970
ES.19197.52	chr2	+	6046	40	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	-16	-291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	35.517309722737	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAGAAATGATTGTCC	4367	False	NA	NA	False	AATAAA	-21	NA	69727630	69852273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69849888_69849979_69850794_69851005_69851455_69851596_69851886
ES.19197.53	chr2	+	6575	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	0	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	4367	False	NA	NA	False	AATAAA	-20	NA	69727630	69852889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.54	chr2	+	8589	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-16	561	combination_of_known_junctions	FALSE	non_canonical	3	25	junction_2	26.5227127878882	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTTTTGTCCACGAG	4367	False	NA	NA	False	AATAAA	-19	NA	69727630	69854918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.55	chr2	+	8017	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	28.5879723076825	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATGTTGAATGTTTAT	4369	False	NA	17	True	AATAAA	-31	NA	69727632	69854351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813477_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.56	chr2	+	5997	39	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	166	-53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	28.5879723076825	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTACATTTTTTTCTTA	4549	False	NA	14	True	AGTAAA	-19	NA	69727812	69852511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813477_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.58	chr2	+	7396	38	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	17110	-5	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_35	27.3416284395573	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTGAATGTTTATG	3243	False	NA	18	True	AATAAA	-32	NA	69744756	69854352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850872_69851005_69851455_69851596_69851886
ES.19197.60	chr2	+	7418	34	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-13058	0	intron_retention	FALSE	non_canonical	3	59	junction_24	21.5991956453302	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	2734	False	NA	NA	False	AATAAA	-20	NA	69753254	69852889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69851005_69851455_69851596_69851886
ES.19197.61	chr2	+	204	1	Intergenic	novelGene_15919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGAATAACCAAG	6676	False	NA	NA	False	NA	NA	NA	69757196	69757400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69757200_69757400
ES.19197.62	chr2	+	171	1	Intergenic	novelGene_15922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	1604	False	NA	NA	False	NA	NA	NA	69767900	69768071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_69767900_69768100
ES.19197.63	chr2	+	6348	29	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	12454	-56	intron_retention	FALSE	non_canonical	0	0	junction_19	37.7681399854319	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTTTACATTTTTTTC	NA	False	NA	11	True	AGTAAA	-16	NA	69778766	69852508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824161_69829492_69829563_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69851005_69851455_69851596_69851886
ES.19197.64	chr2	+	3926	27	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	12455	-297	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	33.9056295617163	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAATCATTGAGAAATGA	NA	False	NA	NA	False	AATAAA	-15	NA	69778767	69852267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.65	chr2	+	6141	28	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	15379	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.4580793337324	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAAGATCCTTATAATG	NA	False	NA	5	True	AATAAA	-19	NA	69781691	69854339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789903_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.66	chr2	+	9826	27	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	16815	-13	intron_retention	TRUE	non_canonical	0	0	junction_16	40.4484660075863	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCCTTATAATGTTGAA	NA	False	NA	10	True	AATAAA	-24	NA	69783127	69854344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824643_69824681_69825804_69828540_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.67	chr2	+	4365	24	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	17672	0	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_13	25.0233917030674	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGGCAGAGTTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	69783984	69852889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.68	chr2	+	3971	24	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	56395	1850	17672	-57	3prime_fragment	FALSE	non_canonical	3	59	junction_13	24.9096666654482	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAACTTTACATTTTTTT	NA	False	NA	10	True	AGTAAA	-15	NA	69783984	69852507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.7	chr2	+	8125	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-43	-2	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGAATGTTTATGTTT	4283	False	NA	21	True	AATAAA	-35	NA	69727546	69854355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.70	chr2	+	4624	16	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-11064	-55	intron_retention	FALSE	canonical	0	0	junction_8	51.0335837137337	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	NA	False	NA	12	True	AGTAAA	-17	NA	69808065	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69837055_69837175_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69851005_69851455_69851596_69851886
ES.19197.71	chr2	+	4391	15	ISM	ENSMUSG00000044308.18	ENSMUST00000112251.9	8081	39	82072	11	-9468	-11	3prime_fragment	FALSE	canonical	3	58	junction_4	27.1383454897009	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTATAATGTTGAATG	NA	False	NA	12	True	AATAAA	-26	NA	69809661	69854346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.72	chr2	+	4638	13	NNC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	-2288	561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.3737527578216	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTTTTGTCCACGAG	81	False	NA	NA	False	AATAAA	-19	NA	69821767	69854918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69821982_69824019_69824157_69829492_69829563_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.74	chr2	+	2240	11	NNC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	42.014759311461	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACATATACATGGCAGA	1033	False	NA	NA	False	AATAAA	-13	NA	69824019	69852882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850872_69851005_69851455_69851596_69851886
ES.19197.75	chr2	+	5827	8	NIC	ENSMUSG00000044308.18	novel	2431	12	NA	NA	667	-55	intron_retention	FALSE	canonical	3	130	junction_1	13.4422422813689	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTACATTTTTTTCT	8533	False	NA	12	True	AGTAAA	-17	NA	69831519	69852509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.76	chr2	+	1895	7	ISM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	115842	1467	4081	1	3prime_fragment	FALSE	canonical	3	129	junction_3	13.5820551545862	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGGCAGAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	69843431	69852890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.77	chr2	+	7087	5	NIC	ENSMUSG00000044308.18	novel	2431	12	NA	NA	4158	-3	intron_retention	FALSE	canonical	3	142	junction_2	11.1018016555873	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGAATGTTTATGTT	NA	False	NA	20	True	AATAAA	-34	NA	69843508	69854354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69843559_69846475_69846584_69846683_69851005_69851455_69851596_69851886
ES.19197.78	chr2	+	4932	2	FSM	ENSMUSG00000044308.18	ENSMUST00000123890.2	1418	2	-3188	-326	-2804	1	multi-exon	FALSE	canonical	3	172	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGGCAGAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	69847667	69852890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_69851596_69851886
ES.19197.8	chr2	+	6287	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-43	-47	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTTTCTTATTGTGA	4283	False	NA	20	True	AGTAAA	-25	NA	69727546	69852517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19197.9	chr2	+	8708	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	-43	581	combination_of_known_junctions	FALSE	non_canonical	3	58	junction_28	22.6070858893837	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAATCACCAAGATACA	4283	False	NA	NA	False	AATAAA	-39	NA	69727546	69854938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ES.19198.1	chr2	-	178	1	Intergenic	novelGene_15915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69738203	69738025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69738000_69738200
ES.19199.1	chr2	-	179	1	Intergenic	novelGene_15916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATGTCATAGTAAAA	NA	False	NA	-7	True	NA	NA	NA	69741370	69741191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69741200_69741400
ES.19199.3	chr2	-	175	2	Antisense	novelGene_ENSMUSG00000044308.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATGTCATAGTAA	NA	False	NA	-9	True	NA	NA	NA	69752153	69741193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_69741203_69751987
ES.19199.4	chr2	-	201	1	Intergenic	novelGene_15917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAACACAAGATTT	NA	False	NA	NA	False	AATAAA	-10	NA	69742643	69742442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69742400_69742600
ES.19199.6	chr2	-	175	2	Antisense	novelGene_ENSMUSG00000044308.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	69752153	69745553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_69745569_69751993
ES.19199.7	chr2	-	175	1	Intergenic	novelGene_15918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	69745728	69745553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69745600_69745700
ES.19199.8	chr2	-	2491	1	Antisense	novelGene_ENSMUSG00000044308.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTACATTTAATTCCGG	NA	False	NA	NA	False	NA	NA	NA	69754437	69751946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_69751900_69754400
ES.192.1	chr1	-	6429	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	6	350	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGCATTCATTGTCA	NA	False	NA	NA	False	AATAAA	-28	NA	24139291	24049823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.10	chr1	-	10111	21	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-7	-5	intron_retention	FALSE	canonical	0	0	junction_3	20.3235700604003	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGACATTTGTAATGC	NA	False	NA	-10	True	AATAAA	-26	NA	24139429	24050178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24082029_24082106_24083194_24083351_24085438_24085489_24088210_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.11	chr1	-	6177	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	22	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	18.0420270266128	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGATAGCAATGACATTT	NA	False	NA	-17	True	AATAAA	-19	NA	24139392	24050185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.12	chr1	-	6303	8	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-3380	-14	intron_retention	FALSE	canonical	0	0	junction_7	23.430313524081	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGGATAGCAATGACAT	NA	False	NA	-19	True	AATAAA	-17	NA	24071547	24050187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065767_24067280
ES.192.13	chr1	-	6825	23	NNC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	272	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	16.7539929865013	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGGGATAGCAATGACAT	NA	False	NA	-19	True	AATAAA	-17	NA	24138991	24050187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24138170
ES.192.14	chr1	-	5321	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	22	-119	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.5502759132153	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCAGGTGTTTTTGA	NA	False	NA	NA	False	TTTAAA	-35	NA	24139392	24050444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.15	chr1	-	5814	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	2	104	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACTTTTATGAATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	24139420	24050567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.16	chr1	-	5160	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-42	-6	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.5502759132153	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTAATTTTGTTG	NA	False	NA	81	True	TATAAA	-24	NA	24139464	24050677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.17	chr1	-	5856	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-157	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTGACTTGGCTGTAAT	NA	False	NA	74	True	TATAAA	-17	NA	24139579	24050684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.18	chr1	-	5741	22	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.6189024383497	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTGACTTGGCTGTAAT	NA	False	NA	74	True	TATAAA	-17	NA	24139431	24050684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094791_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.2	chr1	-	6201	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	7	6	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGCTTGCTTACTCC	NA	False	NA	1	True	AATAAA	-37	NA	24139407	24050167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.20	chr1	-	5806	23	NNC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.8915465518364	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCGTGACTTGGCTGT	NA	False	NA	71	True	TATAAA	-14	NA	24139431	24050687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069990_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.21	chr1	-	6341	13	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-21799	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	19.7882891854978	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCGTGACTTGGCTGT	9785	False	NA	71	True	TATAAA	-14	NA	24089966	24050687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24087195_24089714
ES.192.22	chr1	-	5803	23	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_21	15.3859439985746	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCGTGACTTGGCTGT	NA	False	NA	71	True	TATAAA	-14	NA	24139440	24050687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.24	chr1	-	5525	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	6	-5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	13.6318560731839	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGCCGTGACTTGGCT	NA	False	NA	69	True	TATAAA	-12	NA	24139408	24050689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.26	chr1	-	5427	20	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-9	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	15.966724400723	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCATGTTGACTTTTA	NA	False	NA	1	True	ATTAAA	-29	NA	24139431	24050757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24139141
ES.192.27	chr1	-	5452	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	15.9953118131533	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTCATGTTGACTTT	NA	False	NA	-1	True	ATTAAA	-27	NA	24139406	24050759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.28	chr1	-	5566	22	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	15.2834147506344	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139406	24050761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092303_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.29	chr1	-	5757	20	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	10191	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	16.1130012370218	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTTCTCATGTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	24115416	24050763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24114790
ES.192.3	chr1	-	6132	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_20	16.6794508792302	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAATGCTTGCTTAC	NA	False	NA	-2	True	AATAAA	-34	NA	24139407	24050170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.30	chr1	-	5683	24	NNC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.2223090304273	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTTCTCATGTTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	24139320	24050763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24082029_24082106_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.31	chr1	-	5531	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	8	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_20	16.6794508792302	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAACATTATTTCTC	NA	False	NA	-12	True	ATTAAA	-16	NA	24139406	24050770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.32	chr1	-	5416	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-25	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGTTCATACATGCC	NA	False	NA	-109	True	ATTAAA	-17	NA	24139322	24050867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.33	chr1	-	5409	23	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-6	-161	combination_of_known_junctions	FALSE	canonical	3	9	junction_21	15.3859439985746	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGAAATCAACTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	24139281	24050922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.34	chr1	-	5493	19	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	-2	3457	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.4903341020955	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCTCACATATCATAT	NA	False	NA	NA	False	AATAAA	-23	NA	24139299	24059898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.35	chr1	-	4998	13	NIC	ENSMUSG00000026153.16	novel	2931	16	NA	NA	6	1665	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	13.4750283446414	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCACTTCTAACATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	24139408	24066137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24139141
ES.192.36	chr1	-	2977	9	FSM	ENSMUSG00000026153.16	ENSMUST00000185525.2	2654	9	13	-336	5	336	multi-exon	FALSE	canonical	3	31	junction_8	6.37867541108654	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTTTTATAAAGTAGAG	NA	False	NA	NA	False	AAGAAA	-7	NA	24139409	24090508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.37	chr1	-	6377	1	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	1462	-40580	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTTTCCTGAGGTATT	NA	False	NA	NA	False	NA	NA	NA	24137801	24131424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24131400_24137800
ES.192.4	chr1	-	5401	20	NIC	ENSMUSG00000026153.16	novel	5122	21	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	17.1749995463838	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTGTAATGCTTGCTT	NA	False	NA	-4	True	AATAAA	-32	NA	24139408	24050172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24139141
ES.192.5	chr1	-	6041	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	13.6318560731839	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGTAATGCTTGCT	NA	False	NA	-5	True	AATAAA	-31	NA	24139408	24050173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.6	chr1	-	6293	24	NNC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.2223090304273	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGTAATGCTTGCT	NA	False	NA	-5	True	AATAAA	-31	NA	24139340	24050173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24082029_24082106_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ES.192.7	chr1	-	6276	23	NNC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	17.520766898948	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGTAATGCTTGCT	NA	False	NA	-5	True	AATAAA	-31	NA	24139412	24050173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24082029_24082106_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.8	chr1	-	5682	23	NNC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	18.3993801548488	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGTAATGCTTGCT	NA	False	NA	-5	True	AATAAA	-31	NA	24139406	24050173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24082029_24082106_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.192.9	chr1	-	5628	22	NIC	ENSMUSG00000026153.16	novel	4976	22	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.5502759132153	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGTAATGCTTGCT	NA	False	NA	-5	True	AATAAA	-31	NA	24139428	24050173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ES.1920.1	chr1	+	4653	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	-23	-8	-23	3	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTTTCCCTGTTTGA	2741	False	NA	18	True	AATAAA	-23	NA	171910072	171949900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.10	chr1	+	4245	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	1	84	junction_1	194.703200046174	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3026	False	NA	9	True	AATAAA	-14	NA	171910357	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.14	chr1	+	4555	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	295	junction_11	139.376581338467	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3039	False	NA	9	True	AATAAA	-14	NA	171910370	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.16	chr1	+	4282	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_27	206.74978980869	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCCTGCTTGCCGTT	3041	False	NA	7	True	AATAAA	-12	NA	171910372	171949889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946467_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.17	chr1	+	6747	27	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	1	-4	intron_retention	FALSE	canonical	1	295	junction_11	137.567761678579	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCCTCCTGCTTGCCGT	3041	False	NA	6	True	AATAAA	-11	NA	171910372	171949888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796
ES.1920.20	chr1	+	4186	31	NNC	ENSMUSG00000026553.18	novel	4351	33	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	261.978712027439	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTGCTTGCCGTTT	3041	False	NA	8	True	AATAAA	-13	NA	171910372	171949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944849_171946429_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.22	chr1	+	4157	31	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	213.665314608307	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCCTCCTGCTTGCCG	3041	False	NA	5	True	AATAAA	-10	NA	171910372	171949887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944843_171946422_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.23	chr1	+	4315	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	255.386867611546	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTGCTTGCCGTTT	3043	False	NA	8	True	AATAAA	-13	NA	171910374	171949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925251_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932805_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.27	chr1	+	4287	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	206.659281412062	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGTTTCCCTGTT	3047	False	NA	15	True	AATAAA	-20	NA	171910378	171949897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946499_171946764_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.28	chr1	+	9661	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	7	0	intron_retention	FALSE	canonical	1	295	junction_10	139.811557433896	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	3047	False	NA	13	True	AATAAA	-18	NA	171910378	171949895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.3	chr1	+	4450	31	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	213.665314608307	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	2755	False	NA	13	True	AATAAA	-18	NA	171910086	171949895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944849_171946429_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.30	chr1	+	4390	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	207.096895253013	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3049	False	NA	9	True	AATAAA	-14	NA	171910380	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944918_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.31	chr1	+	11171	30	NNC	ENSMUSG00000026553.18	novel	4351	33	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	216.913096238695	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3049	False	NA	9	True	AATAAA	-14	NA	171910380	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938523_171938720_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.32	chr1	+	4900	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	9	0	intron_retention	FALSE	canonical	1	295	junction_11	139.454743161423	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	3049	False	NA	10	True	AATAAA	-15	NA	171910380	171949892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.33	chr1	+	4289	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	207.153390857475	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	3049	False	NA	10	True	AATAAA	-15	NA	171910380	171949892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939479_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.36	chr1	+	3842	28	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	224.054116038024	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3050	False	NA	9	True	AATAAA	-14	NA	171910381	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171946429_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.37	chr1	+	4362	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	206.745538702622	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	3051	False	NA	13	True	AATAAA	-18	NA	171910382	171949895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931651_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.39	chr1	+	5978	31	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	11	-1	intron_retention	FALSE	canonical	3	733	junction_9	89.6808167273742	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3051	False	NA	9	True	AATAAA	-14	NA	171910382	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.4	chr1	+	10964	31	NIC	ENSMUSG00000026553.18	novel	4351	33	NA	NA	5	-3	intron_retention	FALSE	canonical	1	15	junction_14	210.47089004315	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCCTGCTTGCCGTT	2769	False	NA	7	True	AATAAA	-12	NA	171910100	171949889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.42	chr1	+	4709	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	287	-374	11	369	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATAGTTGTCTTAGCTT	3051	False	NA	NA	False	AATAAA	-18	NA	171910382	171950266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.43	chr1	+	4020	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	287	315	11	-315	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGTTTATCAGATTCT	3051	False	NA	NA	False	AATGAA	-14	NA	171910382	171949577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.45	chr1	+	4478	34	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	229.925859412216	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTGCTTGCCGTTT	3051	False	NA	8	True	AATAAA	-13	NA	171910382	171949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931831_171931978_171932120_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.46	chr1	+	4326	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	207.34036592943	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTGCTTGCCGTTT	3051	False	NA	8	True	AATAAA	-13	NA	171910382	171949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945653_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.47	chr1	+	5960	30	NNC	ENSMUSG00000026553.18	novel	4351	33	NA	NA	11	1	intron_retention	FALSE	canonical	0	0	junction_24	216.513290022212	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTGCCGTTTCCC	3051	False	NA	11	True	AATAAA	-16	NA	171910382	171949893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945866_171946429_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.5	chr1	+	4645	33	FSM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	-298	4	5	1	multi-exon	FALSE	canonical	1	15	junction_16	205.587019193668	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTGCCGTTTCCC	2769	False	NA	11	True	AATAAA	-16	NA	171910100	171949893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.51	chr1	+	3725	27	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	228.124304327382	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTGCCGTTTCCC	3056	False	NA	11	True	AATAAA	-16	NA	171910387	171949893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940981_171946437_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.52	chr1	+	4310	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	207.357443500348	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTGCCGTTTCCC	3058	False	NA	11	True	AATAAA	-16	NA	171910389	171949893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938074_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.53	chr1	+	4249	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_8	205.068195592954	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3058	False	NA	9	True	AATAAA	-14	NA	171910389	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171929023_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.54	chr1	+	5892	31	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_10	185.131016670177	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCCTCCTGCTTGCCGT	3061	False	NA	6	True	AATAAA	-11	NA	171910392	171949888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931831_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.56	chr1	+	4307	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	207.428486829648	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCCTCCTGCTTGCCG	3061	False	NA	5	True	AATAAA	-10	NA	171910392	171949887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932811_171933687_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.58	chr1	+	5354	32	NIC	ENSMUSG00000026553.18	novel	4351	33	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	15	junction_15	207.588923814164	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3062	False	NA	9	True	AATAAA	-14	NA	171910393	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.59	chr1	+	4056	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-4	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	206.659281412062	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGAGTTGTTAACTATCCC	3062	False	NA	6	True	AATAAA	-19	NA	171910393	171949683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946497_171946764_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.6	chr1	+	4428	31	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	29	junction_1	205.033970085176	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	2770	False	NA	10	True	AATAAA	-15	NA	171910101	171949892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.60	chr1	+	4318	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	234.239175226813	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3064	False	NA	9	True	AATAAA	-14	NA	171910395	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915237_171916669_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931826_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.61	chr1	+	5031	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	207.493992288783	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCCTCCTGCTTGCCG	3065	False	NA	5	True	AATAAA	-10	NA	171910396	171949887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935163_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.62	chr1	+	4240	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	206.633951333632	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	3065	False	NA	10	True	AATAAA	-15	NA	171910396	171949892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939512_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.63	chr1	+	4227	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	210.665641448701	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	3066	False	NA	13	True	AATAAA	-18	NA	171910397	171949895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.64	chr1	+	4347	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	207.493992288783	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3068	False	NA	9	True	AATAAA	-14	NA	171910399	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933790_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.66	chr1	+	5312	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	6	-5	intron_retention	FALSE	canonical	1	295	junction_10	138.926192608579	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCCTCCTGCTTGCCG	3073	False	NA	5	True	AATAAA	-10	NA	171910404	171949887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.67	chr1	+	3966	29	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	214.577301612605	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	3073	False	NA	9	True	AATAAA	-14	NA	171910404	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.68	chr1	+	4661	32	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	6	-215	intron_retention	FALSE	canonical	1	295	junction_11	139.454743161423	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCACGCGAGTTGTTAAC	3073	False	NA	0	True	AATAAA	-13	NA	171910404	171949677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.69	chr1	+	4303	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	207.153390857475	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCCTGCTTGCCGTTT	3074	False	NA	8	True	AATAAA	-13	NA	171910405	171949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939438_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.70	chr1	+	4200	32	ISM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	5021	3	4718	-3	3prime_fragment	FALSE	canonical	1	295	junction_10	138.064395538084	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCCTGCTTGCCGTT	7785	False	NA	7	True	AATAAA	-12	NA	171915116	171949889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.71	chr1	+	4147	32	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	4755	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	257.974097062986	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	7822	False	NA	9	True	AATAAA	-14	NA	171915153	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927250_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933685_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.72	chr1	+	3880	29	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-4043	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	215.553023331492	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	895	False	NA	9	True	AATAAA	-14	NA	171918774	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171918808_171919811_171919922_171925247_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.74	chr1	+	159	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTAATT	8353	False	NA	NA	False	NA	NA	NA	171927840	171927999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_171927800_171928000
ES.1920.75	chr1	+	3536	25	ISM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	18849	0	1642	0	3prime_fragment	FALSE	canonical	1	295	junction_3	147.890860424917	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	950	False	NA	10	True	AATAAA	-15	NA	171928944	171949892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.76	chr1	+	2612	16	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	-1703	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	246.842910010035	994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCCTCCTGCTTGCCGT	NA	False	NA	6	True	AATAAA	-11	NA	171938054	171949888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944849_171946429_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.77	chr1	+	2024	17	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	27944	595	-1415	-590	3prime_fragment	FALSE	canonical	3	813	junction_8	81.7293551913876	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCCTCTTCAGTTTCG	NA	False	NA	NA	False	NA	NA	NA	171938342	171949302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.78	chr1	+	4623	3	NNC	ENSMUSG00000026553.18	novel	2505	3	NA	NA	-1347	285	intron_retention	FALSE	non_canonical	0	0	junction_1	479	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	171938410	171943420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171938523_171938720_171942401_171942589
ES.1920.8	chr1	+	4484	33	NNC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_29	205.204613967986	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCCTGCTTGCCGTT	2890	False	NA	7	True	AATAAA	-12	NA	171910221	171949889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947033_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.80	chr1	+	2074	13	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	30501	6	-1004	-1	3prime_fragment	FALSE	canonical	3	813	junction_4	93.2865954405502	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	NA	False	NA	9	True	AATAAA	-14	NA	171940899	171949891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.1920.9	chr1	+	4156	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	259	207	-17	-207	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTTGTTAACTATCCCAT	3023	False	NA	8	True	AATAAA	-21	NA	171910354	171949685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ES.19200.1	chr2	-	509	1	Intergenic	novelGene_15920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGCTGCTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	69760924	69760415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69760400_69760900
ES.19201.1	chr2	-	170	1	Intergenic	novelGene_15921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAGGCAAGAA	NA	False	NA	NA	False	NA	NA	NA	69767699	69767529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69767500_69767700
ES.19202.1	chr2	-	179	1	Intergenic	novelGene_15923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAGAAAAAAAAAAGTAAG	7115	False	NA	NA	False	NA	NA	NA	69792572	69792393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69792400_69792600
ES.19203.1	chr2	-	180	1	Intergenic	novelGene_15924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGAAGG	NA	False	NA	NA	False	NA	NA	NA	69874040	69873860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_69873900_69874000
ES.19204.1	chr2	+	179	1	Intergenic	novelGene_15925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAGTCATGTAT	NA	False	NA	NA	False	NA	NA	NA	70011368	70011547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70011400_70011500
ES.19205.1	chr2	+	1943	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	156	1	156	-1	multi-exon	FALSE	canonical	3	75	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTCTCCTCTGATCTT	NA	False	NA	22	True	AATAAA	-39	NA	70305422	70308072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70305661_70306367
ES.19205.2	chr2	+	2738	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	195	-833	195	833	multi-exon	FALSE	canonical	3	75	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAGAATTGTGTGTATG	NA	False	NA	NA	False	TTTAAA	-44	NA	70305461	70308906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70305661_70306367
ES.19205.4	chr2	+	4585	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	211	-2696	211	2696	multi-exon	FALSE	canonical	3	75	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAATCTTGCTGAGG	NA	False	NA	NA	False	AGTAAA	-16	NA	70305477	70310769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70305661_70306367
ES.19206.1	chr2	-	928	2	FSM	ENSMUSG00000086515.2	ENSMUST00000150702.2	608	2	-100	-220	-100	220	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGCTTTCGTGTG	NA	False	NA	NA	False	NA	NA	NA	70339643	70333556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70334300_70339458
ES.19207.1	chr2	+	577	7	ISM	ENSMUSG00000075302.11	ENSMUST00000136967.2	1865	11	-91	13732	-91	-6	5prime_fragment	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAACCGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-6	NA	70339712	70353859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70339889_70339999_70340046_70343103_70343161_70351416_70351453_70352823_70352852_70353387_70353437_70353674
ES.19207.2	chr2	+	210	1	Intergenic	novelGene_15926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGTTGCATAGGCAC	NA	False	NA	NA	False	NA	NA	NA	70348547	70348757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70348500_70348800
ES.19207.3	chr2	+	326	1	Intergenic	novelGene_15927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATAACTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	70348547	70348873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70348500_70348900
ES.19208.1	chr2	+	3377	17	FSM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_11	3.61420807370024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACCCATTTTTTT	NA	False	NA	6	True	AATAAA	-22	NA	70392363	70432358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420234_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ES.19208.2	chr2	+	6719	3	ISM	ENSMUSG00000070880.11	ENSMUST00000130604.8	1197	9	82	13584	-39	-3578	intron_retention	FALSE	canonical	2	5	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70392467	70403896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70392677_70394111_70394255_70397529
ES.19208.3	chr2	+	3350	18	NNC	ENSMUSG00000070880.11	novel	3355	17	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.75550345870879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATTTGTACCCATTT	NA	False	NA	2	True	AATAAA	-18	NA	70392472	70432354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70414763_70414850_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420234_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ES.19208.4	chr2	+	4205	15	NIC	ENSMUSG00000070880.11	novel	3355	17	NA	NA	85	0	intron_retention	FALSE	canonical	0	0	junction_5	3.9070840946221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTGTACCCATTTTT	NA	False	NA	4	True	AATAAA	-20	NA	70392624	70432356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70404656_70409454_70409546_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420234_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ES.19208.5	chr2	+	3237	17	NNC	ENSMUSG00000070880.11	novel	1138	6	NA	NA	295	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.60338382634989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTGTACCCATTTTT	NA	False	NA	4	True	AATAAA	-20	NA	70392834	70432356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70393010_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420234_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ES.19209.1	chr2	+	203	1	Intergenic	novelGene_15928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATATATTTCATT	NA	False	NA	NA	False	NA	NA	NA	70441460	70441663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70441500_70441700
ES.1921.1	chr1	-	2903	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	-3	1	-3	-1	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTGTTTGGTATTCTT	8993	False	NA	49	True	ATTAAA	-20	NA	171910365	171893580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.10	chr1	-	4968	3	NIC	ENSMUSG00000003458.13	novel	2777	16	NA	NA	-965	-6	intron_retention	FALSE	canonical	3	465	junction_2	23	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	3245	False	NA	44	True	ATTAAA	-15	NA	171899800	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171896432_171897542_171898896_171899031
ES.1921.11	chr1	-	3512	16	NNC	ENSMUSG00000003458.13	novel	3016	18	NA	NA	102	-6	intron_retention	FALSE	canonical	1	1	junction_2	177.662551547089	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9098	False	NA	44	True	ATTAAA	-15	NA	171910260	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895067_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903308_171908778_171908884_171910167
ES.1921.12	chr1	-	3566	14	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	103	-7	intron_retention	FALSE	canonical	3	465	junction_5	34.4240867922344	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTACTTGTTGTTTGGT	9099	False	NA	43	True	ATTAAA	-14	NA	171910259	171893586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.14	chr1	-	6741	11	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	57	-8	intron_retention	FALSE	canonical	3	465	junction_5	31.3338475135116	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9053	False	NA	42	True	ATTAAA	-13	NA	171910305	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171896225_171896328_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171901986_171902481_171903096_171908778_171908884_171910167
ES.1921.15	chr1	-	3107	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	28	-8	intron_retention	FALSE	canonical	3	465	junction_7	32.876469126447	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9024	False	NA	42	True	ATTAAA	-13	NA	171910334	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.16	chr1	-	3655	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	102	-8	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_6	166.944309108607	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9098	False	NA	42	True	ATTAAA	-13	NA	171910260	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171897319_171897542_171897716_171898817_171898896_171899031_171899114_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.17	chr1	-	2635	16	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	105	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	181.415986065176	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9101	False	NA	42	True	ATTAAA	-13	NA	171910257	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171900028_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902975_171903096_171908778_171908884_171910167
ES.1921.18	chr1	-	3033	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	105	-8	intron_retention	FALSE	canonical	3	465	junction_7	32.322953660415	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9101	False	NA	42	True	ATTAAA	-13	NA	171910257	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.19	chr1	-	3386	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	58	-8	intron_retention	FALSE	canonical	3	465	junction_8	32.4704309932728	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9054	False	NA	42	True	ATTAAA	-13	NA	171910304	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.2	chr1	-	4219	17	NNC	ENSMUSG00000003458.13	novel	3016	18	NA	NA	30	-4	intron_retention	FALSE	canonical	0	0	junction_7	223.51146503032	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTGTTGTTTGGTATT	9026	False	NA	46	True	ATTAAA	-17	NA	171910332	171893583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171898896_171899029_171899137_171899687_171899841_171900032_171900143_171900343_171900628_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
ES.1921.20	chr1	-	2865	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	106	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	130.366730322579	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9102	False	NA	42	True	ATTAAA	-13	NA	171910256	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895589_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.22	chr1	-	2787	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	106	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.695618572686	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9102	False	NA	42	True	ATTAAA	-13	NA	171910256	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895345_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899039_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902602_171902971_171903096_171908778_171908884_171910167
ES.1921.23	chr1	-	3091	16	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	54	-8	intron_retention	FALSE	canonical	3	6	junction_2	132.378078077737	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9050	False	NA	42	True	ATTAAA	-13	NA	171910308	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895345_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.24	chr1	-	2805	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	82	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	130.436287129004	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9078	False	NA	42	True	ATTAAA	-13	NA	171910280	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897710_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.25	chr1	-	4503	15	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	52	-8	intron_retention	FALSE	canonical	3	465	junction_7	33.4383380116236	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9048	False	NA	42	True	ATTAAA	-13	NA	171910310	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.26	chr1	-	2801	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	102	-8	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	128.389300566675	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9098	False	NA	42	True	ATTAAA	-13	NA	171910260	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895345_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.28	chr1	-	5439	4	NIC	ENSMUSG00000003458.13	novel	2777	16	NA	NA	-965	-8	intron_retention	FALSE	canonical	3	465	junction_3	44.698993277254	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	3245	False	NA	42	True	ATTAAA	-13	NA	171899800	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171896225_171896328_171898896_171899031
ES.1921.29	chr1	-	12407	10	NIC	ENSMUSG00000003458.13	novel	3016	18	NA	NA	106	-8	intron_retention	FALSE	canonical	3	465	junction_6	31.5445990368409	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9102	False	NA	42	True	ATTAAA	-13	NA	171910256	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171900143_171900343_171902604_171902971_171908884_171910167
ES.1921.3	chr1	-	2985	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	25	6	25	-6	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9021	False	NA	44	True	ATTAAA	-15	NA	171910337	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
ES.1921.30	chr1	-	3898	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	106	-8	intron_retention	FALSE	canonical	3	465	junction_7	32.773295362061	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9102	False	NA	42	True	ATTAAA	-13	NA	171910256	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.31	chr1	-	3332	15	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	48	-8	intron_retention	FALSE	canonical	3	465	junction_6	33.4442118478287	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9044	False	NA	42	True	ATTAAA	-13	NA	171910314	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.32	chr1	-	2881	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	102	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	130.366730322579	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9098	False	NA	42	True	ATTAAA	-13	NA	171910260	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895601_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.33	chr1	-	3349	16	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	105	-8	intron_retention	FALSE	canonical	3	6	junction_2	132.549194221953	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9101	False	NA	42	True	ATTAAA	-13	NA	171910257	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895345_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.34	chr1	-	4623	14	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	102	-8	intron_retention	FALSE	canonical	3	465	junction_6	27.3227477457649	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9098	False	NA	42	True	ATTAAA	-13	NA	171910260	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.35	chr1	-	3085	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	96	-8	intron_retention	FALSE	canonical	3	465	junction_7	32.6884281257654	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9092	False	NA	42	True	ATTAAA	-13	NA	171910266	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.36	chr1	-	3892	16	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	103	-8	intron_retention	FALSE	canonical	3	465	junction_7	32.773295362061	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9099	False	NA	42	True	ATTAAA	-13	NA	171910259	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.37	chr1	-	4936	13	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	106	-8	intron_retention	FALSE	canonical	3	465	junction_5	35.5340212566305	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9102	False	NA	42	True	ATTAAA	-13	NA	171910256	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.38	chr1	-	3404	15	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	109	-8	intron_retention	FALSE	canonical	1	1	junction_10	134.948762007463	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	9105	False	NA	42	True	ATTAAA	-13	NA	171910253	171893587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900628_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.4	chr1	-	2780	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	102	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	167.605563750133	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9098	False	NA	44	True	ATTAAA	-15	NA	171910260	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895345_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899114_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.41	chr1	-	3818	16	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	158	-13	intron_retention	FALSE	canonical	3	42	junction_8	124.530585265896	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAATTTGTACTTGTTG	9154	False	NA	37	True	ATTAAA	-8	NA	171910204	171893592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171899114_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.42	chr1	-	3372	15	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	113	-81	intron_retention	FALSE	canonical	1	1	junction_7	138.205776777579	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGGTTTTTTCCTTTT	9109	False	NA	-31	True	ATTAAA	-18	NA	171910249	171893660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899315_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.43	chr1	-	2696	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	96	-86	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_9	120.663902405608	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGGGGTTTTTTC	9092	False	NA	-36	True	ATTAAA	-13	NA	171910266	171893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899114_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.44	chr1	-	3790	14	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	106	-86	intron_retention	FALSE	canonical	3	465	junction_6	34.6524587786824	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGGGGTTTTTTC	9102	False	NA	-36	True	ATTAAA	-13	NA	171910256	171893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.45	chr1	-	4137	12	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	107	-87	intron_retention	FALSE	canonical	3	465	junction_4	34.443629837223	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTGGGGTTTTTT	9103	False	NA	-37	True	ATTAAA	-12	NA	171910255	171893666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171896432_171897542_171897716_171898817_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.46	chr1	-	3390	6	NIC	ENSMUSG00000003458.13	novel	2777	16	NA	NA	-351	-87	intron_retention	FALSE	canonical	3	465	junction_5	38.5922271966778	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTGGGGTTTTTT	3859	False	NA	-37	True	ATTAAA	-12	NA	171899186	171893666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171896225_171896328_171896432_171897542_171898896_171899031
ES.1921.6	chr1	-	7467	8	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	101	-6	intron_retention	FALSE	canonical	3	465	junction_1	39.1402501738743	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9097	False	NA	44	True	ATTAAA	-15	NA	171910261	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171898896_171899031_171899841_171900032_171900143_171900343_171900495_171901839_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.7	chr1	-	3259	15	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	100	-6	intron_retention	FALSE	canonical	3	42	junction_7	127.977776291393	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9096	False	NA	44	True	ATTAAA	-15	NA	171910262	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899114_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.8	chr1	-	3678	17	NNC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	104	-6	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_6	126.917526739808	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	9100	False	NA	44	True	ATTAAA	-15	NA	171910258	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171897319_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ES.1921.9	chr1	-	3662	10	NIC	ENSMUSG00000003458.13	novel	2777	16	NA	NA	-1765	-6	intron_retention	FALSE	canonical	3	465	junction_6	33.065591380366	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTGTTGTTTGGTA	2445	False	NA	44	True	ATTAAA	-15	NA	171900600	171893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_171894364_171894897_171895111_171895355_171895841_171896128_171896225_171896328_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343
ES.19210.1	chr2	-	116	1	Intergenic	novelGene_15929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	70447649	70447533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70447500_70447600
ES.19211.1	chr2	+	177	1	Intergenic	novelGene_15930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACCTTAA	3461	False	NA	NA	False	NA	NA	NA	70462411	70462588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70462400_70462600
ES.19212.1	chr2	-	161	1	Intergenic	novelGene_15931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70484802	70484641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70484600_70484800
ES.19213.1	chr2	+	2375	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-143	6	-143	-6	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCGAGCGTGTACTTC	NA	False	NA	32	True	AATAAA	-32	NA	70491776	70522081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.10	chr2	+	2170	10	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.071177732553	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTTCTAAGTGG	NA	False	NA	18	True	AATAAA	-18	NA	70491924	70522067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492054_70506800_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.11	chr2	+	2201	10	NNC	ENSMUSG00000014959.13	novel	2417	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	215.596903250854	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491928	70522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513364_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.12	chr2	+	3567	9	NNC	ENSMUSG00000014959.13	novel	1196	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	227.00657341804	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491933	70522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508865_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.13	chr2	+	4272	8	ISM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	14	17	0	1	intron_retention	FALSE	canonical	3	630	junction_6	29.8732014231034	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTTCTAAGTGGCGA	NA	False	NA	21	True	AATAAA	-21	NA	70491933	70522070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729
ES.19213.14	chr2	+	2034	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	19	185	5	-163	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACACAGATCTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	70491938	70521902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.15	chr2	+	3263	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	6	-2073	6	-288	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTTACTGTTGG	NA	False	NA	6	True	ACTAAA	-11	NA	70491939	70521777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.16	chr2	+	6479	9	NIC	ENSMUSG00000014959.13	novel	2417	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	519	junction_8	55.7223866592234	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491942	70522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70518817_70519526_70519647_70521001
ES.19213.17	chr2	+	1088	9	NNC	ENSMUSG00000014959.13	novel	1196	9	NA	NA	17	-363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	225.586873509963	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACATGCAACATTTCT	NA	False	NA	-69	True	AATGAA	-16	NA	70491950	70521702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518775_70521573
ES.19213.19	chr2	+	2004	11	NNC	ENSMUSG00000014959.13	novel	2417	11	NA	NA	34	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	271.951172087932	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAAACAAGAATTTAC	NA	False	NA	0	True	ACTAAA	-5	NA	70491967	70521771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70519722_70519853_70521001
ES.19213.2	chr2	+	2043	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	-95	290	-95	-268	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGAGTCGCATCTCT	NA	False	NA	26	True	ACTAAA	-31	NA	70491824	70521797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.20	chr2	+	10294	1	NIC	ENSMUSG00000014959.13	novel	2417	11	NA	NA	35	-6032	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTGTTTAAAATGTATT	NA	False	NA	NA	False	NA	NA	NA	70491968	70502262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492000_70502300
ES.19213.21	chr2	+	6573	8	NIC	ENSMUSG00000014959.13	novel	1196	9	NA	NA	39	-279	intron_retention	FALSE	canonical	3	630	junction_5	29.4798443769603	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTTGGTCTCTGTGA	NA	False	NA	15	True	ACTAAA	-20	NA	70491972	70521786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.23	chr2	+	1294	10	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	109	2369	95	-4	5prime_fragment	FALSE	canonical	0	0	junction_1	281.771380929844	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCGAGGCCTCCCGTTC	NA	False	NA	5	True	AATAAA	-14	NA	70492028	70519700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70492105_70502908_70503106_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.24	chr2	+	2000	9	NIC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	113	-2	combination_of_known_splicesites	FALSE	canonical	2	35	junction_7	210.254013041369	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTCTCCTTGTGTTCTAA	NA	False	NA	14	True	AATAAA	-14	NA	70492046	70522063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70519526_70519647_70521001
ES.19213.25	chr2	+	2208	10	NIC	ENSMUSG00000014959.13	novel	1844	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	214.071177732553	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70492540	70522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492714_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.26	chr2	+	1534	5	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	21319	0	-4918	0	3prime_fragment	FALSE	canonical	3	519	junction_4	73.9742353796239	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	3742	False	NA	20	True	AATAAA	-20	NA	70513238	70522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.3	chr2	+	1279	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-86	3	-72	-3	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGAGGCCTCCCGTTCA	NA	False	NA	6	True	AATAAA	-15	NA	70491847	70519701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.4	chr2	+	3640	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	-67	-2377	-53	-6	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCGAGCGTGTACTTC	NA	False	NA	32	True	AATAAA	-32	NA	70491866	70522081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.5	chr2	+	2467	11	FSM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	-52	2	-52	2	multi-exon	FALSE	canonical	0	0	junction_1	267.323493168857	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTTCTAAGTGG	NA	False	NA	18	True	AATAAA	-18	NA	70491867	70522067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70492105_70502908_70503106_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19213.6	chr2	+	4965	7	NIC	ENSMUSG00000014959.13	novel	1196	9	NA	NA	-22	-288	intron_retention	FALSE	canonical	3	637	junction_3	24.7835070605881	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTTACTGTTGG	NA	False	NA	6	True	ACTAAA	-11	NA	70491897	70521777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70514448_70518729
ES.19213.7	chr2	+	2426	10	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	214.385829640434	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTTCTAAGTGGCGA	NA	False	NA	21	True	AATAAA	-21	NA	70491920	70522070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519853_70521001
ES.19213.8	chr2	+	3649	10	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_5	281.944351395715	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTTCTAAGTGGCGA	NA	False	NA	21	True	AATAAA	-21	NA	70491920	70522070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70510478_70510553_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ES.19213.9	chr2	+	2198	10	NNC	ENSMUSG00000014959.13	novel	2238	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	215.596903250854	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGTTCTAAGTGG	NA	False	NA	18	True	AATAAA	-18	NA	70491921	70522067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513356_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ES.19214.1	chr2	+	178	1	Intergenic	novelGene_15932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGCCTATGGC	NA	False	NA	NA	False	NA	NA	NA	70530589	70530767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70530600_70530800
ES.19215.1	chr2	+	155	1	Intergenic	novelGene_15934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	7790	False	NA	NA	False	NA	NA	NA	70609532	70609687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70609500_70609700
ES.19216.1	chr2	+	253	1	Intergenic	novelGene_15935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTGTTGTTGCA	NA	False	NA	NA	False	GGGGCT	-7	NA	70638290	70638543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70638300_70638500
ES.19217.1	chr2	+	2577	1	Intergenic	novelGene_15936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCACCCTTGGGCAGA	NA	False	NA	NA	False	NA	NA	NA	70652478	70655055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70652500_70655100
ES.19218.1	chr2	-	4732	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-67	-385	-67	385	multi-exon	TRUE	canonical	3	163	junction_17	29.5425886295749	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGGTTGGAGTTTATT	NA	False	NA	NA	False	GATAAA	-15	NA	70656139	70542365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.10	chr2	-	4339	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-167	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	60.4301709045701	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656239	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.13	chr2	-	4133	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	60.8603596727902	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655481	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655092
ES.19218.14	chr2	-	5409	2	ISM	ENSMUSG00000041997.17	ENSMUST00000141707.2	576	3	-2037	-1734	-2037	0	intron_retention	FALSE	canonical	3	243	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70550605	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70544510_70546955
ES.19218.15	chr2	-	4448	20	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-207	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	82.909322025152	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656279	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.16	chr2	-	7245	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-116	0	intron_retention	FALSE	canonical	3	163	junction_16	29.7830115632684	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655857	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.17	chr2	-	4341	20	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-145	-1	intron_retention	FALSE	canonical	3	27	junction_17	68.1416969169815	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGTGAAAATTACACTC	NA	False	NA	NA	False	AATAAA	-21	NA	70655886	70542751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.18	chr2	-	4329	20	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0997143984689	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGTGAAAATTACACT	NA	False	NA	NA	False	AATAAA	-20	NA	70656142	70542752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555942_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.19	chr2	-	3154	15	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-32260	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.060169449015	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70580828	70542753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70543600_70543736_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778
ES.19218.2	chr2	-	4069	21	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	82.4229337017313	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655348	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655092
ES.19218.21	chr2	-	4141	18	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-51	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	82.1949745472949	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70656123	70542753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580774_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70655536
ES.19218.24	chr2	-	4501	22	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-70	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_19	89.3321656944709	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70656142	70542753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70615069_70615155_70617220_70617340_70655536
ES.19218.25	chr2	-	4368	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-67	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	60.4017023846971	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70656139	70542753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554452_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.26	chr2	-	4446	21	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-77	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.4236616512516	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACTGTGAAAATTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	70656149	70542753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568855_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.28	chr2	-	4307	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	148	-4	intron_retention	FALSE	canonical	3	163	junction_16	30.1664620414586	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGACTGTGAAAATTACA	NA	False	NA	NA	False	AATAAA	-18	NA	70655924	70542754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.3	chr2	-	4493	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-213	0	-213	0	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656285	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.30	chr2	-	4235	20	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_19	84.0202125793767	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGACTGTGAAAATTACA	NA	False	NA	NA	False	AATAAA	-18	NA	70656081	70542754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70655536
ES.19218.31	chr2	-	4198	21	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	154	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	77.2058287954996	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGACTGTGAAAATTACA	NA	False	NA	NA	False	AATAAA	-18	NA	70655918	70542754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70625281_70625358_70655536
ES.19218.33	chr2	-	6301	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-3	-11	intron_retention	FALSE	canonical	3	163	junction_16	30.3294665830093	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGACTGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	70655658	70542761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.34	chr2	-	5242	20	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	158	-11	intron_retention	FALSE	canonical	3	27	junction_17	68.519968984118	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGACTGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	70655914	70542761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.35	chr2	-	7749	19	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-52	-11	intron_retention	FALSE	canonical	3	27	junction_16	69.9946426521345	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGACTGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	70656124	70542761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70551554_70551901_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.37	chr2	-	4170	19	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-59	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	96.9468481077373	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGTAAAGACTGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	70656131	70542761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70655536
ES.19218.39	chr2	-	3819	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-58	519	-58	-519	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTGCAGTGATCCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	70656130	70543269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.4	chr2	-	4417	21	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_18	73.7085307138868	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656124	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70615069_70615155_70617220_70617340_70655536
ES.19218.40	chr2	-	4020	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-190	-519	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTGCAGTGATCCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	70656262	70543269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.41	chr2	-	3545	21	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-27	-519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.2058287954996	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTGCAGTGATCCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	70655768	70543269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70564812_70564901_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.42	chr2	-	3643	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	137	-521	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	60.2066616352639	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATGTGCAGTGATCCA	NA	False	NA	NA	False	ATTAAA	-22	NA	70655935	70543271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554449_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.43	chr2	-	3866	22	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	47	-521	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_19	89.3321656944709	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATGTGCAGTGATCCA	NA	False	NA	NA	False	ATTAAA	-22	NA	70656025	70543271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70615069_70615155_70617220_70617340_70655536
ES.19218.44	chr2	-	3490	21	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	253	-526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	82.4229337017313	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCAAGGCATGTGCAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	70655319	70543276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655116
ES.19218.45	chr2	-	2506	9	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-24018	-576	intron_retention	FALSE	canonical	3	205	junction_8	22.561028345357	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTGACTGTACATCAT	NA	False	NA	NA	False	TATAAA	-22	NA	70572586	70543326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397
ES.19218.46	chr2	-	3651	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-58	-579	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	60.4301709045701	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACAAGTTGACTGTACAT	NA	False	NA	NA	False	TATAAA	-19	NA	70656130	70543329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.47	chr2	-	3675	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-65	670	-65	-670	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTATTTTTTTTAAGT	NA	False	NA	NA	False	TTTAAA	-21	NA	70656137	70543420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.48	chr2	-	3140	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-66	459	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGTTTTTCATTATTTA	NA	False	NA	-19	True	AATATA	-32	NA	70656138	70544025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.49	chr2	-	3074	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-78	1284	-78	450	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGAAGGGTAGTTTTT	NA	False	NA	-28	True	AATATA	-23	NA	70656150	70544034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.5	chr2	-	3970	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	230	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	60.8603596727902	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655342	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655116
ES.19218.50	chr2	-	4409	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-38	446	intron_retention	FALSE	canonical	3	163	junction_16	30.3443203545207	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTAATATGAAGGGTAGT	NA	False	NA	-32	True	AATATA	-19	NA	70655779	70544038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.51	chr2	-	2856	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	16	445	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	62.0437917826226	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGTAATATGAAGGGTAG	NA	False	NA	-33	True	AATATA	-18	NA	70656056	70544039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70655536
ES.19218.52	chr2	-	4831	8	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-20263	442	intron_retention	TRUE	non_canonical	0	0	junction_3	87.4267039949955	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTTGTAATATGAAGGG	NA	False	NA	-36	True	AATATA	-15	NA	70568831	70544042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70550949_70551067_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764
ES.19218.53	chr2	-	3112	20	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-104	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.8002496714512	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTTGTAATATGAAGG	NA	False	NA	-37	True	AATATA	-14	NA	70656176	70544043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580890_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.54	chr2	-	3181	21	NNC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-40	441	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	73.7694211716481	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTTGTAATATGAAGG	NA	False	NA	-37	True	AATATA	-14	NA	70656112	70544043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70633323_70633478_70655536
ES.19218.55	chr2	-	2860	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-40	1460	-40	274	multi-exon	FALSE	canonical	3	163	junction_17	29.5425886295749	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTCCAAGGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	70656112	70544210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.56	chr2	-	3141	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-197	219	intron_retention	FALSE	canonical	3	163	junction_16	30.1664620414586	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGACTGTTTGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	70656269	70544265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.57	chr2	-	177	1	Intergenic	novelGene_15933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	70554969	70554792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70554800_70555000
ES.19218.58	chr2	-	3254	13	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-70	-14204	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	72.7230286009108	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGCTAGTCATTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	70656142	70560859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70562411_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.59	chr2	-	1732	12	ISM	ENSMUSG00000041997.17	ENSMUST00000135128.8	4271	22	37	29182	-37	4410	5prime_fragment	FALSE	canonical	3	27	junction_9	86.3965487526188	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTGTCTCCTTATTG	NA	False	NA	NA	False	AATAAA	-33	NA	70655704	70571932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.6	chr2	-	4633	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	76.370216707824	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656172	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70562157_70562411_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.60	chr2	-	1731	11	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	291	29191	-40	4401	5prime_fragment	FALSE	canonical	3	163	junction_8	34.4820243025261	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGACACATTTGTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	70655781	70571941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.61	chr2	-	1875	6	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	309	38590	-22	-3	5prime_fragment	FALSE	canonical	3	163	junction_3	37.8174562867467	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTATGACTATGTATT	NA	False	NA	NA	False	AATAAA	-15	NA	70655763	70581340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.62	chr2	-	1943	6	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	18	38813	18	-226	5prime_fragment	FALSE	canonical	3	163	junction_3	37.8174562867467	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTTACTTATTCAA	NA	False	NA	NA	False	TATAAA	-16	NA	70656054	70581563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ES.19218.63	chr2	-	2581	3	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	-75	55818	-75	-17231	5prime_fragment	FALSE	canonical	3	217	junction_2	11.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGGCTATATTTTTAG	NA	False	NA	NA	False	NA	NA	NA	70656147	70598568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70600420_70617220_70617340_70655536
ES.19218.64	chr2	-	2677	1	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-52701	-17255	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70601269	70598592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70598600_70601300
ES.19218.7	chr2	-	4539	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-190	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656262	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19218.8	chr2	-	4030	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	131	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	62.0437917826226	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655941	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70655536
ES.19218.9	chr2	-	4113	20	NNC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	149	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	94.1502012096184	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70655923	70542750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554449_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
ES.19219.1	chr2	+	175	1	Intergenic	novelGene_15937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAGTAAATAGGTAA	NA	False	NA	NA	False	NA	NA	NA	70658764	70658939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70658800_70658900
ES.1922.1	chr1	+	1930	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2	-15	1	15	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCAGGTCTATTTCTAA	NA	False	NA	39	True	AATAAA	-29	NA	171954323	171962865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.10	chr1	+	3034	5	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	3	1779	intron_retention	FALSE	non_canonical	0	0	junction_4	192.507629718928	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171954331	171960357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171959038_171959252
ES.1922.100	chr1	+	2475	14	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-13	427	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	182.283185629705	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAAAAAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	171975731	172024999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172024449
ES.1922.101	chr1	+	2874	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.085210359249	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTATCAAGTTAAAATT	NA	False	NA	14	True	ATTAAA	-16	NA	171975731	172023032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975906_171976776_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.102	chr1	+	2184	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	26	649	-10	23	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGGAGACGGAACCAGC	NA	False	NA	NA	False	AATAAA	-25	NA	171975734	172022384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.103	chr1	+	3741	13	FSM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	-10	925	-10	-2	multi-exon	FALSE	canonical	3	475	junction_9	39.6410106105057	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGTATCAAGTTAAAAT	NA	False	NA	13	True	ATTAAA	-15	NA	171975734	172023031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.104	chr1	+	3185	13	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248.268447899088	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975734	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171976283_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003178_172007473_172007585_172013862_172013936_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.106	chr1	+	4686	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	26	-1853	-10	314	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGAAATGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	171975734	172024886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.107	chr1	+	6158	11	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	161	junction_1	127.836458023523	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTTGTGTGGTATG	NA	False	NA	14	True	AGTAAA	-14	NA	171975734	172023954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.108	chr1	+	4353	13	NNC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	-8	-5	intron_retention	FALSE	canonical	0	0	junction_3	162.289585994364	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGCTTTGTGTGGT	NA	False	NA	11	True	AGTAAA	-11	NA	171975736	172023951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171976889_171993414_171993486_171999895_172000243_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.109	chr1	+	2648	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_13	180.213056025722	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATCAAGTTAAAATTAT	NA	False	NA	16	True	ATTAAA	-18	NA	171975736	172023034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022306
ES.1922.11	chr1	+	2294	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	12	-389	5	389	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATACAATGTATC	NA	False	NA	31	True	AATATA	-26	NA	171954333	171963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.113	chr1	+	7884	8	NNC	ENSMUSG00000026554.16	novel	571	5	NA	NA	-740	2	intron_retention	FALSE	non_canonical	0	0	junction_1	263.961422660701	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	17	True	ATTAAA	-19	NA	172005363	172023035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172005872_172006063_172006883_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172020205_172021351_172021469_172022122
ES.1922.114	chr1	+	2412	7	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	1406	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	219.411840053256	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGGTATGTGGTCC	NA	False	NA	20	True	AGTAAA	-20	NA	172007509	172023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172007585_172013862_172013936_172014421_172014480_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.115	chr1	+	1520	7	ISM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	38152	0	-1087	0	3prime_fragment	FALSE	canonical	3	475	junction_3	47.4812828620102	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	172013860	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.116	chr1	+	164	1	ISM	ENSMUSG00000026554.16	ENSMUST00000195394.6	2584	10	40303	26	1011	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	702	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	172015958	172016122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172016000_172016100
ES.1922.117	chr1	+	6083	3	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	1125	0	intron_retention	FALSE	canonical	3	558	junction_1	26.5	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	172016072	172023956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172020205_172021351_172021469_172022122
ES.1922.12	chr1	+	2940	6	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	-3	intron_retention	FALSE	canonical	3	409	junction_4	20.3803827245712	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954333	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956888_171957468_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.13	chr1	+	3089	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	24	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATTCCTAATGTCACA	NA	False	NA	NA	False	NA	NA	NA	171954333	171964084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.14	chr1	+	2110	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	255	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTTTTTCACAGTGG	NA	False	NA	NA	False	NA	NA	NA	171954333	171963105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.15	chr1	+	2914	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	12	-1009	5	-201	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTCCTCCTCAAGGTA	NA	False	NA	NA	False	AATAAA	-14	NA	171954333	171963859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.16	chr1	+	1989	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	152.618505310678	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954333	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958091_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.17	chr1	+	2242	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	389	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	148.836302352481	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATACAATGTATC	NA	False	NA	31	True	AATATA	-26	NA	171954333	171963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961825
ES.1922.18	chr1	+	1843	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	148.836302352481	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCAAGTGTGTGGGTT	NA	False	NA	14	True	AATAAA	-4	NA	171954333	171962840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961825
ES.1922.19	chr1	+	4655	21	Fusion	ENSMUSG00000003464.14_ENSMUSG00000026554.16	novel	4656	13	NA	NA	5	4	multi-exon	TRUE	canonical	0	0	junction_8	134.68462235905	1056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGGTATGTGGTCC	NA	False	NA	20	True	AGTAAA	-20	NA	171954333	172023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773_171962012_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.2	chr1	+	1863	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGGTTATTTTTCA	NA	False	NA	22	True	AATAAA	-12	NA	171954323	171962848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.20	chr1	+	2045	9	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	189.743535792395	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954334	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956435_171956580_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.21	chr1	+	3350	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	13	-1446	-5	236	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTCTAGTTTGCTTCT	NA	False	NA	NA	False	AAAACA	-31	NA	171954334	171964296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.22	chr1	+	2672	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_3	196.951563505718	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954334	171962850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956435_171956580_171956721_171956888_171957468_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.23	chr1	+	2339	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	485	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTGAGTCACTTCGAG	NA	False	NA	13	True	AAGAAA	-10	NA	171954334	171963335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.24	chr1	+	4896	18	Fusion	ENSMUSG00000003464.14_ENSMUSG00000026554.16	novel	1917	8	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_7	141.728601699842	1051	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	17	True	ATTAAA	-19	NA	171954334	172023035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.25	chr1	+	1995	9	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	189.527702460617	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954334	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956435_171956580_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.26	chr1	+	3842	6	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	-77	intron_retention	FALSE	canonical	3	80	junction_2	148.799731182553	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACCTAAACTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	171954334	171963983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696
ES.1922.27	chr1	+	3134	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	13	-1230	-5	20	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTGATTCCTAATGT	NA	False	NA	NA	False	NA	NA	NA	171954334	171964080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.28	chr1	+	3276	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-5	212	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGTATATGGTTATC	NA	False	NA	NA	False	AAAACA	-7	NA	171954334	171964272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.29	chr1	+	2847	6	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	-5	49430	intron_retention	TRUE	non_canonical	0	0	junction_4	223.369648788729	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGATAGATAGTTCAACC	NA	False	NA	NA	False	NA	NA	NA	171954334	172013490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956888_171957472_171957555_171958178_171959045_171959263_171960233_172013331
ES.1922.3	chr1	+	4224	4	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	419	junction_3	18.7853370714738	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954323	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171958341_171960696_171961612_171961773
ES.1922.30	chr1	+	2143	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	14	-240	-4	240	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAACTTTGAATCAACCT	NA	False	NA	NA	False	NA	NA	NA	171954335	171963090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.31	chr1	+	1203	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	14	700	-4	-117	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGTTCCCCTTGATTC	NA	False	NA	NA	False	NA	NA	NA	171954335	171962150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.32	chr1	+	2388	6	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	-4	1815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	204.948774087575	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACTGCCCTCAGTGA	NA	False	NA	NA	False	NA	NA	NA	171954335	171960393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171959045_171959263
ES.1922.33	chr1	+	3796	4	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	441	junction_3	9.89949493661167	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954335	171962850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956888_171957468_171958341_171960696
ES.1922.34	chr1	+	3553	5	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-3	382	intron_retention	FALSE	canonical	3	441	junction_4	8.61684396980704	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTATACATGTATACA	NA	False	NA	24	True	AATATA	-19	NA	171954336	171963232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956888_171957468_171957555_171958178_171958341_171960696
ES.1922.35	chr1	+	4187	6	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	16	-1431	-2	221	intron_retention	FALSE	canonical	3	412	junction_2	17.5795335546766	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTATCTAGCACTTT	NA	False	NA	NA	False	AAAACA	-16	NA	171954337	171964281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696
ES.1922.36	chr1	+	2312	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	409	junction_5	19.2440466984814	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954337	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.37	chr1	+	3062	8	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	-1	-68	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	154.390705017881	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCTAGACTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	171954338	171963992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961753
ES.1922.38	chr1	+	2973	5	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	-1	1779	intron_retention	FALSE	non_canonical	0	0	junction_4	210.724197708759	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171954338	171960357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171959045_171959263
ES.1922.39	chr1	+	3711	6	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	-203	intron_retention	FALSE	canonical	3	80	junction_2	148.799731182553	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCAGTCCTCCTCAAGG	NA	False	NA	NA	False	AATAAA	-12	NA	171954339	171963857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696
ES.1922.4	chr1	+	2074	7	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2	3	1	-3	intron_retention	FALSE	canonical	3	409	junction_6	20.5865382120345	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954323	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566
ES.1922.40	chr1	+	2520	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	409	junction_5	20.7739152678438	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954339	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.41	chr1	+	2430	9	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	2	389	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	189.743535792395	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTATACAATGTATC	NA	False	NA	31	True	AATATA	-26	NA	171954341	171963239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956435_171956580_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.42	chr1	+	2340	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	2	495	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	148.836302352481	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTCGAGTTCGTAACAT	NA	False	NA	23	True	AAGAAA	-20	NA	171954341	171963345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961825
ES.1922.43	chr1	+	2550	7	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	20	-491	2	491	intron_retention	FALSE	canonical	3	409	junction_6	20.5865382120345	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCACTTCGAGTTCGTA	NA	False	NA	19	True	AAGAAA	-16	NA	171954341	171963341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566
ES.1922.44	chr1	+	704	5	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	3146	844	3128	-261	3prime_fragment	FALSE	canonical	3	409	junction_3	16.4525833837729	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTAGGCCTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	171957467	171962006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.45	chr1	+	2983	2	Antisense	novelGene_ENSMUSG00000089803.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACCCTAAAAAGCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	171969629	171973695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_171971453_171972535
ES.1922.46	chr1	+	2945	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-141	-50	-107	50	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATCGAGTGATGCTGAAG	NA	False	NA	106	True	AATAAA	-21	NA	171975543	172023124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.48	chr1	+	4402	13	ISM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-109	-885	-75	3	intron_retention	FALSE	canonical	3	418	junction_1	56.2106652592628	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975575	172023959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351
ES.1922.49	chr1	+	2751	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	158.668658075738	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975575	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.5	chr1	+	3452	4	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	1	1779	intron_retention	TRUE	non_canonical	0	0	junction_3	215.754490103914	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171954323	171960357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956888_171957468_171959045_171959263
ES.1922.50	chr1	+	3749	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-109	-886	-75	4	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGGTATGTGGTCC	NA	False	NA	20	True	AGTAAA	-20	NA	171975575	172023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.51	chr1	+	4953	12	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-74	0	intron_retention	FALSE	canonical	3	418	junction_1	52.904404665943	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975576	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351
ES.1922.52	chr1	+	3796	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-67	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	158.523064978499	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTGGTATGTGGT	NA	False	NA	18	True	AGTAAA	-18	NA	171975583	172023958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015085_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.53	chr1	+	3060	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	-92	-214	-58	214	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTCAGGTCTCCTAA	NA	False	NA	NA	False	AAAACA	-13	NA	171975592	172023288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.54	chr1	+	3663	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-57	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.699108786742	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTGCTTTGTGTGG	NA	False	NA	10	True	AGTAAA	-10	NA	171975593	172023950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.56	chr1	+	4764	12	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-14	44	intron_retention	FALSE	canonical	3	418	junction_1	53.8065097908029	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGCGATCGAGTGATG	NA	False	NA	100	True	AATAAA	-15	NA	171975636	172023118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.57	chr1	+	5628	12	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-4	3	intron_retention	FALSE	canonical	1	1	junction_6	170.696482846596	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975646	172023959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003178_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.58	chr1	+	2862	15	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	201.670434832958	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATCAAGTTAAAATTAT	NA	False	NA	16	True	ATTAAA	-18	NA	171975668	172023034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172006750_172006883_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.6	chr1	+	4068	3	NNC	ENSMUSG00000003464.14	novel	642	4	NA	NA	1	1814	intron_retention	FALSE	non_canonical	0	0	junction_2	232.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAACTGCCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	171954323	171960392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171959045_171959263
ES.1922.60	chr1	+	1995	12	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.928064095147	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975668	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975711_172000460_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.61	chr1	+	4289	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	13	41	intron_retention	FALSE	canonical	3	418	junction_1	52.3479279012604	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCAAGCGATCGAGTG	NA	False	NA	97	True	AATAAA	-12	NA	171975668	172023115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.62	chr1	+	6059	11	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	14	4	intron_retention	FALSE	canonical	3	418	junction_1	55.2511538341056	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGGTATGTGGTCC	NA	False	NA	20	True	AGTAAA	-20	NA	171975669	172023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.63	chr1	+	2757	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.085210359249	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGTATCAAGTTAAAAT	NA	False	NA	13	True	ATTAAA	-15	NA	171975677	172023031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976776_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.64	chr1	+	5552	12	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	418	junction_1	53.8065097908029	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTTTGTGTGGTAT	NA	False	NA	13	True	AGTAAA	-13	NA	171975683	172023953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.65	chr1	+	3677	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.085210359249	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTGTGGTATGTGG	NA	False	NA	17	True	AGTAAA	-17	NA	171975683	172023957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976776_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.66	chr1	+	7087	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-1	2	intron_retention	FALSE	canonical	3	418	junction_1	56.741311131211	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTGGTATGTGGT	NA	False	NA	18	True	AGTAAA	-18	NA	171975683	172023958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172020205_172021351_172021469_172022122
ES.1922.67	chr1	+	5116	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	1	3	intron_retention	FALSE	canonical	3	418	junction_1	52.3479279012604	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975685	172023959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.68	chr1	+	4769	12	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	2	-5	intron_retention	FALSE	canonical	3	418	junction_1	57.114644747456	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGCTTTGTGTGGT	NA	False	NA	11	True	AGTAAA	-11	NA	171975686	172023951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351
ES.1922.69	chr1	+	2744	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	159.080940285536	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975686	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003178_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.7	chr1	+	2451	6	NNC	ENSMUSG00000003464.14	novel	855	5	NA	NA	1	1816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	178.562706072685	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAACTGCCCTCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	171954323	171960394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171959045_171959263
ES.1922.70	chr1	+	3808	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	-22	-927	2	4	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGGTATGTGGTCC	NA	False	NA	20	True	AGTAAA	-20	NA	171975686	172023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.71	chr1	+	3801	15	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	202.514852063058	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTGGTATGTGGT	NA	False	NA	18	True	AGTAAA	-18	NA	171975686	172023958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003178_172006750_172006883_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.72	chr1	+	2967	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	-19	-89	5	48	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGATCGAGTGATGCTGA	NA	False	NA	104	True	AATAAA	-19	NA	171975689	172023122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.73	chr1	+	3849	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	184.394643673249	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTTTGTGTGGTAT	NA	False	NA	13	True	AGTAAA	-13	NA	171975695	172023953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015085_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.74	chr1	+	4312	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-10	1	intron_retention	FALSE	canonical	2	4	junction_7	209.277313827467	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATCAAGTTAAAATTAT	NA	False	NA	16	True	ATTAAA	-18	NA	171975696	172023034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172006750_172006883_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.75	chr1	+	5341	11	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-9	2	intron_retention	FALSE	canonical	0	0	junction_10	175.002314270412	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	17	True	ATTAAA	-19	NA	171975697	172023035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022362
ES.1922.76	chr1	+	5186	11	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-8	42	intron_retention	FALSE	canonical	3	418	junction_1	55.2511538341056	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCAAGCGATCGAGTGA	NA	False	NA	98	True	AATAAA	-13	NA	171975698	172023116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.78	chr1	+	3011	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-8	44	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	184.394643673249	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGCGATCGAGTGATG	NA	False	NA	100	True	AATAAA	-15	NA	171975698	172023118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015085_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.79	chr1	+	4955	12	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_8	169.63460975416	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975698	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014083_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.8	chr1	+	2412	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	4	-499	3	499	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGTTCGTAACATCATT	NA	False	NA	27	True	AAGAAA	-24	NA	171954325	171963349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ES.1922.80	chr1	+	3615	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	157.303535773561	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGGTATGTGGTCCA	NA	False	NA	21	True	AGTAAA	-21	NA	171975700	172023961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976879_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.81	chr1	+	2690	14	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	-6	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	159.330403610839	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTATTGTCAGAAGT	NA	False	NA	26	True	ATTAAA	-28	NA	171975700	172023044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003127_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.83	chr1	+	6873	11	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	161	junction_1	127.36812788135	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGCTTTGTGTGGT	NA	False	NA	11	True	AGTAAA	-11	NA	171975705	172023951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351
ES.1922.84	chr1	+	7269	13	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_6	164.030484971544	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCAAGTTAAAATTATT	NA	False	NA	17	True	ATTAAA	-19	NA	171975707	172023035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172005872_172006063_172007585_172013862_172013936_172014421_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.85	chr1	+	4345	13	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	5	13	intron_retention	FALSE	canonical	3	161	junction_1	119.058896489651	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTGTCAGAAGTTT	NA	False	NA	28	True	ATTAAA	-30	NA	171975713	172023046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.86	chr1	+	5239	12	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	524	junction_4	27.9775588937436	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975716	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.87	chr1	+	5675	11	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	10	-2	intron_retention	FALSE	canonical	3	524	junction_4	28.7784641702784	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGTATCAAGTTAAAAT	NA	False	NA	13	True	ATTAAA	-15	NA	171975718	172023031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.88	chr1	+	5121	12	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	10	-1	intron_retention	FALSE	canonical	3	475	junction_8	40.5807021677762	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGTGTGGTATGT	NA	False	NA	15	True	AGTAAA	-15	NA	171975718	172023955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.9	chr1	+	1862	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	162.388081117085	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTTATTTTTC	NA	False	NA	21	True	AATAAA	-11	NA	171954328	171962847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961773
ES.1922.90	chr1	+	6196	11	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	11	-1	intron_retention	FALSE	canonical	3	524	junction_3	29.01103238425	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTATCAAGTTAAAATT	NA	False	NA	14	True	ATTAAA	-16	NA	171975719	172023032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976889_171993414_171993486_171999895_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.91	chr1	+	4408	12	ISM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	-25	927	11	-4	intron_retention	FALSE	canonical	3	475	junction_9	39.5319726234871	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTATCAAGTTAAA	NA	False	NA	11	True	ATTAAA	-13	NA	171975719	172023029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351
ES.1922.92	chr1	+	3048	15	NNC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	204.298750832786	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975720	172023033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000180_172000494_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015714_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.93	chr1	+	3725	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.085210359249	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGCTTTGTGTGGT	NA	False	NA	11	True	AGTAAA	-11	NA	171975720	172023951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975866_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.94	chr1	+	4683	13	FSM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	-24	-3	12	3	multi-exon	FALSE	canonical	3	475	junction_9	39.6410106105057	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975720	172023959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.95	chr1	+	4005	15	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	216.836732052821	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGTGTGGTATGT	NA	False	NA	15	True	AGTAAA	-15	NA	171975720	172023955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172018410_172018647_172020084_172020205_172021351_172021469_172022122
ES.1922.96	chr1	+	5242	13	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	12	-6	intron_retention	FALSE	canonical	3	161	junction_1	119.058896489651	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTGCTTTGTGTGG	NA	False	NA	10	True	AGTAAA	-10	NA	171975720	172023950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.97	chr1	+	4554	14	NIC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	14	3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	156.568226238454	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTGGTATGTGGTC	NA	False	NA	19	True	AGTAAA	-19	NA	171975722	172023959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976689_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.98	chr1	+	2800	14	NNC	ENSMUSG00000026554.16	novel	2859	14	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.085210359249	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTATCAAGTTAAAATT	NA	False	NA	14	True	ATTAAA	-16	NA	171975726	172023032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_171975866_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ES.1922.99	chr1	+	4567	12	NIC	ENSMUSG00000026554.16	novel	4656	13	NA	NA	-13	15	intron_retention	FALSE	canonical	3	524	junction_4	27.9775588937436	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGCACAGGAGACG	NA	False	NA	NA	False	AATAAA	-17	NA	171975731	172022376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
ES.19220.1	chr2	+	4774	1	Antisense	novelGene_ENSMUSG00000041975.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGCATCTTGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	70822336	70827110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_70822300_70827100
ES.19221.1	chr2	+	2631	1	Intergenic	novelGene_15938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACCACCACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70872721	70875352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70872700_70875400
ES.19222.1	chr2	+	7436	14	NNC	ENSMUSG00000041966.19	novel	441	5	NA	NA	-4963	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	59.1652984812778	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGTGTATACATATGTA	NA	False	NA	6	True	NA	NA	NA	70880708	70926203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70880781_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.10	chr2	+	3469	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGTGTGTGTATACAT	NA	False	NA	1	True	NA	NA	NA	70886089	70926198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
ES.19222.11	chr2	+	6275	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	2	1462	2	-1462	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGGTTGTCCACCA	NA	False	NA	NA	False	NA	NA	NA	70886089	70924740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.12	chr2	+	1942	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	2	-1473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	58.1999105827211	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886089	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924599
ES.19222.13	chr2	+	2254	14	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	2	300	combination_of_known_junctions	TRUE	canonical	3	27	junction_1	53.8095479968128	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAACCAAAAGA	NA	False	NA	-29	True	NA	NA	NA	70886089	70920922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.14	chr2	+	3692	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	57.9623382297611	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGTGTGTATACATAT	NA	False	NA	3	True	NA	NA	NA	70886090	70926200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924319
ES.19222.16	chr2	+	5907	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	4	-1463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	72.2956303193029	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCCATGGTTGTCCACC	NA	False	NA	NA	False	NA	NA	NA	70886091	70924739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70921020_70921181
ES.19222.17	chr2	+	4401	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	6	3332	6	2248	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTCAGTTTTTAGAGCA	NA	False	NA	NA	False	NA	NA	NA	70886093	70922870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.18	chr2	+	1793	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	6	-1473	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	68.3002076669386	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886093	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
ES.19222.19	chr2	+	1851	14	NNC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	6	-1473	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	59.1323858241356	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886093	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70924541
ES.19222.2	chr2	+	1876	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	-9	5872	-9	-292	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTCCTCATTATCTGC	NA	False	NA	NA	False	NA	NA	NA	70886078	70920330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.21	chr2	+	6077	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	-3	-1473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.3712480873977	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886098	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893778_70901431_70901519_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.22	chr2	+	2723	14	NNC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	-2	300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.0067033333098	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAACCAAAAGA	NA	False	NA	-29	True	NA	NA	NA	70886099	70920922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886743_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903545_70905794_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.23	chr2	+	4229	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	12	3498	-2	2082	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGGTCTAAGCATGAAG	NA	False	NA	NA	False	TATAAA	-15	NA	70886099	70922704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.24	chr2	+	6152	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	3	-1464	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	57.3287304353876	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTCCATGGTTGTCCAC	NA	False	NA	NA	False	NA	NA	NA	70886104	70924738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.25	chr2	+	2261	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	6	300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.3712480873977	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAACCAAAAGA	NA	False	NA	-29	True	NA	NA	NA	70886107	70920922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893778_70901431_70901519_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.26	chr2	+	2341	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	7	359	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	60.7650301480127	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTCTTATGCGGTCTT	NA	False	NA	30	True	NA	NA	NA	70886108	70920981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70920132
ES.19222.27	chr2	+	3383	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	8	-292	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	57.9623382297611	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGCTGAGTTTTTAAT	NA	False	NA	NA	False	AATACA	-13	NA	70886109	70925910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924319
ES.19222.28	chr2	+	2489	14	NNC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	9	362	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	59.6569086155336	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTATGCGGTCTTATT	NA	False	NA	33	True	NA	NA	NA	70886110	70920984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886455_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.29	chr2	+	7214	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	23	502	9	-502	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGGACAGAACTTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	70886110	70925700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.3	chr2	+	1967	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	-46	-16	-9	16	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGCTGACTTGTC	NA	False	NA	28	True	AATAAA	-37	NA	70886078	70929502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ES.19222.30	chr2	+	4081	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	23	3635	9	1945	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTTTTTATGCAAAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	70886110	70922567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.31	chr2	+	5943	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	9	-1464	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	73.4886612569132	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTCCATGGTTGTCCAC	NA	False	NA	NA	False	NA	NA	NA	70886110	70924738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.32	chr2	+	4860	12	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	9	345	intron_retention	FALSE	canonical	3	168	junction_9	22.9915543243151	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTTCAATTCATCAGT	NA	False	NA	16	True	NA	NA	NA	70886110	70920967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.33	chr2	+	5541	10	NNC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	9	-1466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.3046044167231	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATTCCATGGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	70886110	70924736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886212_70905836_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.35	chr2	+	6101	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	-9	-1473	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	60.9550722527119	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886115	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886464_70886838_70886943_70890696_70890788_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.36	chr2	+	2535	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	-6	300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.8479201204912	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAACCAAAAGA	NA	False	NA	-29	True	NA	NA	NA	70886118	70920922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70887901_70888009_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.38	chr2	+	1964	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	1	-1473	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	52.7831528471898	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886125	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
ES.19222.39	chr2	+	7797	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.3407071567536	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTGTGTATACATATG	NA	False	NA	4	True	NA	NA	NA	70886125	70926201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70887396_70887498_70890696_70890788_70893706_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.4	chr2	+	4623	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	-7	3123	-7	2457	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCAGGCTTGGTTTATG	NA	False	NA	NA	False	NA	NA	NA	70886080	70923079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.40	chr2	+	3029	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	0	-421	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	84.3062928873531	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCACATAGGTTTCAT	NA	False	NA	NA	False	AGTAAA	-28	NA	70886127	70925781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905794_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924319
ES.19222.41	chr2	+	7688	14	NNC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	59.6569086155336	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGTGTGTATACATAT	NA	False	NA	3	True	NA	NA	NA	70886127	70926200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886455_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.42	chr2	+	1357	10	ISM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	-68	4054	0	1132	5prime_fragment	FALSE	canonical	3	195	junction_1	18.2357673234921	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTGTTGTTTTCAA	NA	False	NA	NA	False	ATTAAA	-20	NA	70886127	70914934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768
ES.19222.43	chr2	+	2416	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	43	5280	3	300	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAACCAAAAGA	NA	False	NA	-29	True	NA	NA	NA	70886130	70920922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.44	chr2	+	1800	14	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	6	-1473	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	73.6233015596583	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886133	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70920132_70920278_70924541
ES.19222.45	chr2	+	1647	14	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	6	-1473	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	82.0015153561814	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATATTCCATG	NA	False	NA	NA	False	NA	NA	NA	70886133	70924729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886261_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
ES.19222.46	chr2	+	7533	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	60.7650301480127	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGTGTGTGTATACAT	NA	False	NA	1	True	NA	NA	NA	70886133	70926198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70920132
ES.19222.47	chr2	+	5370	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	10	-3475	7	3475	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTGACCCTTGAATT	NA	False	NA	NA	False	NA	NA	NA	70886134	70932961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ES.19222.48	chr2	+	3641	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	75.9567546135864	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGTGTATACATATGT	NA	False	NA	5	True	NA	NA	NA	70886134	70926202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886455_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924319
ES.19222.49	chr2	+	5163	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	54	2522	14	-2522	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGCTGTTGAGACATT	NA	False	NA	NA	False	NA	NA	NA	70886141	70923680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.5	chr2	+	2964	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	-6	424	intron_retention	FALSE	canonical	3	168	junction_10	23.8758362273566	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTTTCTGAGGACATA	NA	False	NA	95	True	TATAAA	-15	NA	70886081	70921046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.50	chr2	+	3263	14	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	73.6233015596583	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGTGTGTATACATAT	NA	False	NA	3	True	NA	NA	NA	70886141	70926200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70920132_70920278_70924541
ES.19222.51	chr2	+	2844	13	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	-19	874	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	57.3287304353876	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTGAGTGGCTATGT	NA	False	NA	NA	False	AATACA	-29	NA	70886170	70921496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.53	chr2	+	552	3	ISM	ENSMUSG00000041966.19	ENSMUST00000112159.9	2490	8	106	22888	38	-17575	5prime_fragment	FALSE	canonical	3	195	junction_1	30.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCTCACCCTCTT	NA	False	NA	NA	False	AAAAAG	-30	NA	70886233	70890914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70886464_70886838_70886943_70890696
ES.19222.54	chr2	+	3140	15	NNC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	218	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.812346172212	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTGTGTATACATATG	NA	False	NA	4	True	NA	NA	NA	70886413	70926201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912262_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70924541
ES.19222.55	chr2	+	734	5	ISM	ENSMUSG00000041966.19	ENSMUST00000130292.8	1214	11	19992	2031	-22	1129	internal_fragment	FALSE	canonical	3	201	junction_3	3.96074487943871	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGACATTGTTGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	70905663	70914931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768
ES.19222.56	chr2	+	4759	1	NIC	ENSMUSG00000041966.19	novel	7739	14	NA	NA	10512	334	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCAATTCTAGTTTTTC	NA	False	NA	5	True	NA	NA	NA	70916197	70920956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70916200_70921000
ES.19222.57	chr2	+	7220	1	NIC	ENSMUSG00000041966.19	novel	1905	15	NA	NA	16578	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTGGCTTTATGACTA	NA	False	NA	9	True	AATAAA	-18	NA	70922263	70929483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_70922300_70929500
ES.19222.6	chr2	+	7453	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	0	286	0	-286	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTTTTTAATGATTGT	NA	False	NA	NA	False	AATACA	-19	NA	70886087	70925916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.7	chr2	+	2581	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	0	5158	0	422	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTTTCTGAGGACA	NA	False	NA	93	True	TATAAA	-13	NA	70886087	70921044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.8	chr2	+	7738	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	1	0	1	0	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGTGTATACATATGT	NA	False	NA	5	True	NA	NA	NA	70886088	70926202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19222.9	chr2	+	3034	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	1	4704	1	876	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGAGTGGCTATGTTT	NA	False	NA	NA	False	AATACA	-31	NA	70886088	70921498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ES.19223.1	chr2	-	2522	11	NNC	ENSMUSG00000041975.18	novel	2473	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.4106266554854	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885924	70794904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70816914_70817093_70823827_70823920_70848563_70848719_70885714
ES.19223.2	chr2	-	2342	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	2	3	2	-3	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885925	70794907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ES.19223.3	chr2	-	2276	9	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.7279215040562	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885925	70794907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70796024_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ES.19223.4	chr2	-	3247	6	NNC	ENSMUSG00000041975.18	novel	2297	9	NA	NA	1218	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	43.2508959444773	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70805785	70794907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70804070_70804201_70804413_70804511
ES.19223.5	chr2	-	2114	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTTTGTTGGAGT	NA	False	NA	-3	True	NA	NA	NA	70885925	70794907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
ES.19223.6	chr2	-	3327	10	NNC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	8	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	51.5517239955521	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTGTTGGAG	NA	False	NA	-4	True	NA	NA	NA	70885908	70794908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_70796858_70797393_70797501_70803596_70803737_70810720_70810771_70812198_70812540_70823273_70823349_70823827_70823920_70846510_70846735_70848563_70848719_70885714
ES.19223.7	chr2	-	3098	9	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	72	junction_6	13.7386316640341	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTGTTGGAG	NA	False	NA	-4	True	NA	NA	NA	70885914	70794908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ES.19223.8	chr2	-	1686	8	ISM	ENSMUSG00000041975.18	ENSMUST00000148876.8	2473	11	13	7129	2	-4640	5prime_fragment	FALSE	canonical	0	0	junction_1	38.078329580924	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTACGTATATATG	NA	False	NA	NA	False	AATAAA	-23	NA	70885914	70802033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_70802678_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ES.19224.1	chr2	-	2498	1	Intergenic	novelGene_15939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTCCTGGAGTCAAGG	NA	False	NA	NA	False	NA	NA	NA	70890340	70887842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70887800_70890300
ES.19225.1	chr2	-	178	1	Intergenic	novelGene_15940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAATGAAACA	NA	False	NA	NA	False	NA	NA	NA	70934928	70934750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70934800_70934900
ES.19226.1	chr2	-	175	1	Intergenic	novelGene_15941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAAAATCCCTG	NA	False	NA	NA	False	NA	NA	NA	70951082	70950907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_70950900_70951100
ES.19227.1	chr2	+	2938	2	Intergenic	novelGene_15942	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACACATGTCCATCT	NA	False	NA	NA	False	AATAAA	-12	NA	70984668	70989428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70987535_70989356
ES.19228.1	chr2	+	453	1	Intergenic	novelGene_15943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAACAATAAAACCAAAC	NA	False	NA	NA	False	AATAAA	-32	NA	70997933	70998386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70997900_70998400
ES.19228.2	chr2	+	193	1	Intergenic	novelGene_15944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAATAAG	NA	False	NA	NA	False	NA	NA	NA	70997934	70998127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_70997900_70998100
ES.19229.1	chr2	+	1740	3	Intergenic	novelGene_15945	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATTTTAATGGAAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	71011300	71026915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71011396_71011624_71011709_71025354
ES.1923.1	chr1	-	159	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	171959255	171959096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171959100_171959300
ES.19230.1	chr2	-	154	1	Intergenic	novelGene_15946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	3327	False	NA	NA	False	NA	NA	NA	71041650	71041496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71041500_71041600
ES.19231.1	chr2	+	2548	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-73	-9	-21	2	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCACTTTTACTTTT	NA	False	NA	21	True	AATAAA	-23	NA	71042028	71093644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.10	chr2	+	2750	17	NNC	ENSMUSG00000027012.16	novel	2097	17	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.867752306113	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCACTTTTACTTTT	NA	False	NA	21	True	AATAAA	-23	NA	71042323	71093644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71075785_71076054_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.12	chr2	+	3297	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	147	-813	-3	813	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAAAGTTATTAACCTTA	NA	False	NA	NA	False	AATACA	-23	NA	71042324	71094460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.14	chr2	+	2531	17	FSM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	5	-439	-3	0	multi-exon	FALSE	canonical	1	5	junction_4	189.242197659507	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTCACTTTTACTT	NA	False	NA	19	True	AATAAA	-21	NA	71042332	71093642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.15	chr2	+	3569	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	156	-1094	-2	1094	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAAATGGTCACTGGTC	NA	False	NA	NA	False	TATAAA	-34	NA	71042333	71094741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.17	chr2	+	3341	17	NNC	ENSMUSG00000027012.16	novel	2097	17	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	191.60962919436	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTCAAATTTTCACTT	NA	False	NA	13	True	AATAAA	-15	NA	71042334	71093636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71042419_71044782_71044900_71046453_71047332_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.2	chr2	+	2177	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-70	359	-18	73	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGGTGTCATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	71042031	71093276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.20	chr2	+	2487	17	NNC	ENSMUSG00000027012.16	novel	2097	17	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	190.407693761964	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTCAAATTTTCACTT	NA	False	NA	13	True	AATAAA	-15	NA	71042352	71093636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71068723_71068766_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.21	chr2	+	8894	12	NNC	ENSMUSG00000027012.16	novel	4523	10	NA	NA	-5320	-86	intron_retention	TRUE	canonical	2	2	junction_1	169.699393922078	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCCTTTTCTGAATT	4049	False	NA	NA	False	AATACA	-17	NA	71059822	71093316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71060911_71061025_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.22	chr2	+	211	1	ISM	ENSMUSG00000027012.16	ENSMUST00000149735.2	2248	4	18115	212	-4680	-212	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGAGGGGTGGTTCCA	4689	False	NA	NA	False	AATAAA	-7	NA	71060462	71060673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71060500_71060700
ES.19231.23	chr2	+	8006	10	FSM	ENSMUSG00000027012.16	ENSMUST00000137683.2	4523	10	-3454	-29	-3454	29	multi-exon	FALSE	canonical	3	519	junction_1	30.8260752218028	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCTTTACTAAGGAG	5915	False	NA	NA	False	CATAAA	-40	NA	71061688	71090722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427
ES.19231.25	chr2	+	1856	10	ISM	ENSMUSG00000027012.16	ENSMUST00000112144.9	2565	18	35039	-8	12212	2	3prime_fragment	FALSE	canonical	3	540	junction_3	32.4406390462394	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTTACTTTTTGAAA	NA	False	NA	26	True	AATAAA	-28	NA	71077354	71093649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.26	chr2	+	1494	2	FSM	ENSMUSG00000027012.16	ENSMUST00000138613.2	812	2	-449	-233	-449	0	multi-exon	FALSE	canonical	3	573	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	6267	False	NA	12	True	AATAAA	-14	NA	71090441	71093635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71091292_71092991
ES.19231.27	chr2	+	181	1	Genic_Genomic	ENSMUSG00000027012.16	novel	NA	NA	NA	NA	-115	263	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCTTAGATAAG	6601	False	NA	NA	False	NA	NA	NA	71090775	71090956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_71090800_71091000
ES.19231.3	chr2	+	2550	17	FSM	ENSMUSG00000027012.16	ENSMUST00000112142.8	2585	17	8	27	8	-20	multi-exon	FALSE	canonical	1	5	junction_4	197.040565303188	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAACAAATATATGC	NA	False	NA	-8	True	NA	NA	NA	71042057	71093615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71063992_71064053_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.4	chr2	+	2050	16	NNC	ENSMUSG00000027012.16	novel	2466	16	NA	NA	-17	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.807628343102	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATGCCATGGATA	NA	False	NA	NA	False	ATTAAA	-9	NA	71042067	71093194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71042190_71044782_71044900_71049653_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.5	chr2	+	3298	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	-9	-823	8	811	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAAAGTTATTAACCT	NA	False	NA	NA	False	AATACA	-21	NA	71042092	71094458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.6	chr2	+	2244	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	3	219	3	14	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTAAGTAAGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	71042104	71093416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.7	chr2	+	2631	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042177	71093647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.8	chr2	+	2295	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	1	335	1	-90	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGCAGCCTTTTCTG	NA	False	NA	NA	False	AATACA	-13	NA	71042178	71093312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19231.9	chr2	+	2048	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	139	444	1	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGGATAATCTGGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71042316	71093203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ES.19232.1	chr2	-	193	1	Intergenic	novelGene_15947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATTATCCATCT	NA	False	NA	NA	False	NA	NA	NA	71069338	71069145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71069100_71069300
ES.19233.1	chr2	+	176	1	Intergenic	novelGene_15948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCCAGAGCAAAGAGAGG	3115	False	NA	NA	False	NA	NA	NA	71132903	71133079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71132900_71133100
ES.19234.1	chr2	+	2887	1	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATATTTAAGATACCT	NA	False	NA	NA	False	ACTAAA	-12	NA	71140821	71143708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71140800_71143700
ES.19235.1	chr2	+	177	1	Intergenic	novelGene_15949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAGAAACTATC	NA	False	NA	NA	False	NA	NA	NA	71156639	71156816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71156600_71156800
ES.19236.1	chr2	+	3170	3	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCTTATGCCAAATAAC	NA	False	NA	NA	False	AATAAA	-14	NA	71178306	71181702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71180936_71181056_71181196_71181300
ES.19236.2	chr2	+	1077	1	Intergenic	novelGene_15951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTGCCTTAGTCATAG	NA	False	NA	NA	False	NA	NA	NA	71178306	71179383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71178300_71179400
ES.19236.3	chr2	+	6565	3	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTTTTTAATTTTATA	NA	False	NA	NA	False	NA	NA	NA	71178306	71185093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71180940_71181056_71181196_71181300
ES.19236.5	chr2	+	4572	3	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACTGTGAAGAATTTT	NA	False	NA	NA	False	AATAAA	-9	NA	71178306	71183104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71180936_71181056_71181196_71181300
ES.19236.6	chr2	+	9129	4	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71180804	71190328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71180936_71181056_71181196_71181300_71186826_71186994
ES.19236.7	chr2	+	5016	2	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71185145	71190328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_71186828_71186994
ES.19237.1	chr2	+	193	1	Intergenic	novelGene_15953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	71202760	71202953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71202800_71203000
ES.19238.1	chr2	-	5984	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5270	-3	at_least_one_novel_splicesite	TRUE	canonical	3	57	junction_15	22.4311291636323	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTCGTGTACATCTC	NA	False	NA	NA	False	NA	NA	NA	71164454	71101409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
ES.19238.10	chr2	-	4559	19	NIC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-34	420	combination_of_known_junctions	FALSE	canonical	3	14	junction_15	42.5599432028768	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71197911	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.11	chr2	-	3197	20	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-13	420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.6230109253399	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71178185	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159504_71160290_71160375_71163948_71164065_71174233_71174377_71178111
ES.19238.12	chr2	-	2995	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5252	420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	45.4111532501232	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164436	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160290_71160375_71163948_71164065_71164384
ES.19238.14	chr2	-	3105	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5302	420	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	47.2642949830727	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164486	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160179_71160375_71163948_71164065_71164435
ES.19238.15	chr2	-	3313	15	NNC	ENSMUSG00000027010.17	novel	2392	17	NA	NA	-461	419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.6345910378841	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGAGTTGGTTTCCT	NA	False	NA	-4	True	AATAAA	-16	NA	71159645	71104614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158925
ES.19238.16	chr2	-	3281	20	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-21	419	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	47.6951306190112	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGAGTTGGTTTCCT	NA	False	NA	-4	True	AATAAA	-16	NA	71197898	71104614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71159066_71159421_71159467_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.18	chr2	-	4143	15	NIC	ENSMUSG00000027010.17	novel	2392	17	NA	NA	-1611	-49	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	23.2199992968764	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTCCTGATGACTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	71160795	71105082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777
ES.19238.19	chr2	-	3688	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-7	-50	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_18	46.3831333754889	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCTCCTGATGACTTA	NA	False	NA	-2	True	AATAAA	-19	NA	71178179	71105083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71160375_71163948_71164065_71174233_71174377_71177931
ES.19238.2	chr2	-	8162	18	NIC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-59	424	intron_retention	FALSE	canonical	3	27	junction_16	38.6667959270798	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGGTTTCCTTCCTA	NA	False	NA	1	True	AATAAA	-21	NA	71197936	71104609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.20	chr2	-	2398	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5254	-50	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCTCCTGATGACTTA	NA	False	NA	-2	True	AATAAA	-19	NA	71164438	71105083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
ES.19238.21	chr2	-	2602	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-40	-50	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	42.0343774652235	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCTCCTGATGACTTA	NA	False	NA	-2	True	AATAAA	-19	NA	71197917	71105083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.22	chr2	-	2539	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5241	-52	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_16	45.0655558158074	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTCCTCCTGATGACT	NA	False	NA	-4	True	AATAAA	-17	NA	71164425	71105085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159494_71160290_71160375_71163948_71164065_71164384
ES.19238.23	chr2	-	3192	20	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-9028	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	46.9272437394969	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71207121	71105086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856_71198241_71206658_71206800_71206888
ES.19238.24	chr2	-	3218	5	ISM	ENSMUSG00000027010.17	ENSMUST00000147553.2	994	8	9955	-331	-1901	-56	3prime_fragment	FALSE	canonical	3	126	junction_4	6.83282518435822	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71115034	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813
ES.19238.25	chr2	-	2316	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5241	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.1691913193618	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164425	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124019_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71159421_71159467_71163948_71164065_71164384
ES.19238.26	chr2	-	2300	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5266	-56	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164450	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
ES.19238.27	chr2	-	2527	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5582	-56	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	30.983436435188	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71168794	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71168501
ES.19238.28	chr2	-	2525	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5256	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.03028028703	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164440	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71137364_71137451_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71163948_71164065_71164384
ES.19238.29	chr2	-	3630	21	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-35	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.5318105639614	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71197912	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71137364_71137451_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.3	chr2	-	2845	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5230	421	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGAGTTGGTTTCCTTC	NA	False	NA	-2	True	AATAAA	-18	NA	71164414	71104612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
ES.19238.30	chr2	-	2713	18	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	9	-56	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	42.9923144334661	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71178163	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71174233_71174377_71177931
ES.19238.31	chr2	-	2617	20	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-16	-56	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	46.203572189848	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71197893	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.32	chr2	-	2897	20	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-19	-56	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	49.5286368939847	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71178191	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159494_71160290_71160375_71163948_71164065_71174233_71174377_71177931
ES.19238.33	chr2	-	2627	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5252	-56	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	45.1798873639833	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164436	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159464_71160179_71160375_71163948_71164065_71164384
ES.19238.34	chr2	-	2620	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5293	-56	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	47.2642949830727	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164477	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159467_71160179_71160375_71163948_71164065_71164435
ES.19238.35	chr2	-	2712	21	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	0	-56	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_16	48.1031184020329	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71197877	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159494_71160290_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.36	chr2	-	3333	18	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5242	-56	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_16	40.2334880915617	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCATTCTCCTCCTGAT	NA	False	NA	-8	True	AATAAA	-13	NA	71164426	71105089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71160375_71163948_71164065_71164384
ES.19238.37	chr2	-	2513	19	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5246	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	48.86404040237	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCATTCTCCTCCTGA	NA	False	NA	-9	True	AATAAA	-12	NA	71164430	71105090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128939_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159494_71160290_71160375_71163948_71164065_71164384
ES.19238.38	chr2	-	2653	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5559	-57	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	39.6401292095523	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCATTCTCCTCCTGA	NA	False	NA	-9	True	AATAAA	-12	NA	71168817	71105090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71168501
ES.19238.4	chr2	-	3199	21	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-10	421	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_16	48.1031184020329	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGAGTTGGTTTCCTTC	NA	False	NA	-2	True	AATAAA	-18	NA	71197887	71104612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71159494_71160290_71160375_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.41	chr2	-	7652	21	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-8976	-58	intron_retention	FALSE	canonical	0	0	junction_19	49.5179512904159	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTCATTCTCCTCCTG	NA	False	NA	-10	True	AATAAA	-11	NA	71207069	71105091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71159421_71164065_71174233_71174377_71196870_71196925_71197856_71198241_71206658_71206800_71207002
ES.19238.42	chr2	-	3151	1	Genic_Genomic	ENSMUSG00000027010.17	novel	NA	NA	NA	NA	-1719	2331	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGAAAGTGTGATGGAG	NA	False	NA	NA	False	NA	NA	NA	71160903	71157752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_71157800_71160900
ES.19238.43	chr2	-	175	1	Intergenic	novelGene_15950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAATGATTATTG	NA	False	NA	NA	False	NA	NA	NA	71161723	71161548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71161500_71161700
ES.19238.44	chr2	-	196	1	Intergenic	novelGene_15952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTAATTTCTGAGTTC	NA	False	NA	13	True	NA	NA	NA	71183472	71183276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71183300_71183500
ES.19238.45	chr2	-	1950	1	Intergenic	novelGene_15954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTATGTTCGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	71205809	71203859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71203900_71205800
ES.19238.6	chr2	-	2993	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	151	3207	-65	420	multi-exon	FALSE	canonical	3	27	junction_16	36.6501273382513	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71197942	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ES.19238.7	chr2	-	2766	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5256	420	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71164440	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
ES.19238.8	chr2	-	2979	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5606	420	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	30.983436435188	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71168770	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71168501
ES.19238.9	chr2	-	3105	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5584	420	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_16	39.6401292095523	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71168792	71104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71168501
ES.19239.1	chr2	+	185	1	Intergenic	novelGene_15955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAATGATA	2024	False	NA	NA	False	NA	NA	NA	71216509	71216694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71216500_71216700
ES.1924.1	chr1	-	917	1	FSM	ENSMUSG00000089803.4	ENSMUST00000126220.3	628	1	72	-361	72	361	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAAAAAAAATT	NA	False	NA	NA	False	AATAAA	-6	NA	171972396	171971479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_171971500_171972400
ES.19240.1	chr2	+	1606	12	NNC	ENSMUSG00000027018.12	novel	1703	4	NA	NA	-1013	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	846.162509058122	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCACCGCCCACTGCTTT	3803	False	NA	14	True	AATAAA	-15	NA	71218288	71271856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71218364_71218663_71218774_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.11	chr2	+	3702	7	NIC	ENSMUSG00000027018.12	novel	1899	11	NA	NA	-14	12390	intron_retention	FALSE	canonical	3	1950	junction_1	151.506508844413	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCTTTCCGCCACTA	5104	False	NA	NA	False	NA	NA	NA	71219589	71254684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71251056_71251554_71251660_71251976
ES.19240.15	chr2	+	1291	10	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-7	-112	combination_of_known_splicesites	FALSE	canonical	3	214	junction_4	625.456277892832	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5111	False	NA	12	True	AATAAA	-13	NA	71219596	71271854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.17	chr2	+	3459	8	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-6	17282	-6	12390	5prime_fragment	FALSE	canonical	3	1950	junction_1	140.272620861183	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCTTTCCGCCACTA	5112	False	NA	NA	False	NA	NA	NA	71219597	71254684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976
ES.19240.18	chr2	+	1494	11	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-1	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	659.429298712152	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5117	False	NA	12	True	AATAAA	-13	NA	71219602	71271854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71219649_71220246_71220343_71239331_71239437_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.2	chr2	+	3044	11	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-980	-112	intron_retention	FALSE	canonical	0	0	junction_1	664.361535611447	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	3836	False	NA	12	True	AATAAA	-13	NA	71218321	71271854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71218364_71218663_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.21	chr2	+	2042	10	NNC	ENSMUSG00000027018.12	novel	1899	11	NA	NA	4	-112	intron_retention	FALSE	canonical	0	0	junction_7	699.755160002852	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5122	False	NA	12	True	AATAAA	-13	NA	71219607	71271854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264414_71264551_71269039_71269157_71271511
ES.19240.22	chr2	+	7329	6	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	5228	-103	intron_retention	FALSE	canonical	3	1873	junction_3	186.977431793251	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCACTGCTTTCTTCTTA	NA	False	NA	21	True	AATAAA	-22	NA	71244559	71271863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.23	chr2	+	5202	1	NIC	ENSMUSG00000027018.12	novel	1899	11	NA	NA	-953	12390	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTCTTTCCGCCACTA	NA	False	NA	NA	False	NA	NA	NA	71249482	71254684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71249500_71254700
ES.19240.24	chr2	+	4712	7	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	130	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	820.683336548811	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCCACTGCTTTCTTCT	NA	False	NA	19	True	AATAAA	-20	NA	71250565	71271861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71265364_71266226_71269157_71271511
ES.19240.25	chr2	+	3591	3	NNC	ENSMUSG00000027018.12	novel	1899	11	NA	NA	14685	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1117	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCCCACTGCTTTCT	2222	False	NA	16	True	AATAAA	-17	NA	71265120	71271858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71265429_71266220_71269157_71271511
ES.19240.3	chr2	+	3027	9	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-925	-2417	intron_retention	FALSE	canonical	1	2	junction_8	729.736328666046	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACTGAAGAGTGAG	3891	False	NA	NA	False	AATAAA	-24	NA	71218376	71266739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71266541
ES.19240.4	chr2	+	1581	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-58	53	-58	-53	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTATAATGTGGTGC	5060	False	NA	6	True	AATAAA	-17	NA	71219545	71271913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ES.19240.5	chr2	+	1390	10	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-43	-112	combination_of_known_splicesites	FALSE	canonical	2	53	junction_9	672.636731705537	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5075	False	NA	12	True	AATAAA	-13	NA	71219560	71271854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71271511
ES.19240.6	chr2	+	1483	11	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	-24	-108	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_10	653.622406286688	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCCCACTGCTTTCT	5094	False	NA	16	True	AATAAA	-17	NA	71219579	71271858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271520
ES.19240.9	chr2	+	3836	10	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	-14	109	-14	-109	intron_retention	FALSE	canonical	3	1873	junction_8	155.15424424157	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACCGCCCACTGCTTTC	5104	False	NA	15	True	AATAAA	-16	NA	71219589	71271857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039
ES.19241.1	chr2	-	7180	1	Intergenic	novelGene_15956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTACTGGAAAGAGAGGT	NA	False	NA	NA	False	NA	NA	NA	71232926	71225746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71225700_71232900
ES.19241.2	chr2	-	155	1	Intergenic	novelGene_15957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	71231079	71230924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71230900_71231100
ES.19242.1	chr2	-	7261	2	Genic_Genomic	ENSMUSG00000086846.3	novel	381	1	NA	NA	-5563	1494	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71248824	71241386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_71247479_71247655
ES.19242.2	chr2	-	8285	1	FSM	ENSMUSG00000086846.3	ENSMUST00000121697.2	381	1	-7123	-781	-7123	781	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGGAGAGGGAGATCT	NA	False	NA	NA	False	TTTAAA	-33	NA	71250384	71242099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_71242100_71250400
ES.19243.1	chr2	+	5728	1	Intergenic	novelGene_15958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTCAGCTCC	9900	False	NA	NA	False	NA	NA	NA	71272798	71278526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71272800_71278500
ES.19244.1	chr2	+	4637	6	NIC	ENSMUSG00000041921.17	novel	837	9	NA	NA	0	943	intron_retention	TRUE	canonical	3	4	junction_1	31.2627573959816	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACATCGAAGAAGAGTGG	NA	False	NA	NA	False	NA	NA	NA	71283676	71348439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71283743_71331122_71331214_71337128_71337287_71340084_71341905_71342469_71342513_71345980
ES.19244.10	chr2	+	338	2	NNC	ENSMUSG00000041921.17	novel	1898	6	NA	NA	-9	-57875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGAATGTGTTGAGAT	NA	False	NA	NA	False	AATAAA	-15	NA	71283685	71288424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71283743_71288143
ES.19244.11	chr2	+	2870	10	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	4	junction_1	25.5342906696074	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	71283685	71355538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71283743_71331122_71331214_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.12	chr2	+	10645	7	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	0	-25	intron_retention	FALSE	canonical	3	53	junction_1	8.78761755097604	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283694	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71283743_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71354194_71355060_71355140_71355226
ES.19244.13	chr2	+	1327	9	ISM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	76	5	1	-5	intron_retention	FALSE	canonical	3	42	junction_6	11.1663557170636	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAAACCTATTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	71283695	71355530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060
ES.19244.14	chr2	+	1992	1	Intergenic	novelGene_15959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTGTTTGTGGACTGA	NA	False	NA	NA	False	NA	NA	NA	71296573	71298565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71296600_71298600
ES.19244.15	chr2	+	159	1	Intergenic	novelGene_15960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	71317775	71317934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71317800_71317900
ES.19244.16	chr2	+	7799	6	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	980	0	intron_retention	FALSE	canonical	3	49	junction_3	10.3421467790783	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	6949	False	NA	NA	False	NA	NA	NA	71341581	71355538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71341905_71342469_71342513_71345980_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.17	chr2	+	3077	3	ISM	ENSMUSG00000041921.17	ENSMUST00000139045.8	2770	9	66701	28	4640	-25	intron_retention	FALSE	canonical	3	49	junction_1	9	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1870	False	NA	NA	False	NA	NA	NA	71350395	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71352975_71354145_71354194_71355060
ES.19244.18	chr2	+	2655	2	NIC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	7013	-25	intron_retention	FALSE	canonical	3	70	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4243	False	NA	NA	False	NA	NA	NA	71352768	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71355140_71355226
ES.19244.2	chr2	+	3008	6	ISM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	61	7109	4	930	5prime_fragment	FALSE	canonical	3	53	junction_1	9.55824251627882	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGCAACAT	NA	False	NA	NA	False	NA	NA	NA	71283680	71348426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980
ES.19244.3	chr2	+	1234	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	62	25	5	-25	multi-exon	FALSE	canonical	3	42	junction_6	11.0565326201412	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283681	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.4	chr2	+	2776	9	NNC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	6	-25	intron_retention	FALSE	canonical	0	0	junction_5	22.9288982508973	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283682	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71283743_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352854_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.5	chr2	+	2754	9	FSM	ENSMUSG00000041921.17	ENSMUST00000139045.8	2770	9	-12	28	6	-25	multi-exon	FALSE	canonical	3	42	junction_5	11.7147076361299	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283682	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71283743_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.6	chr2	+	9255	9	NIC	ENSMUSG00000041921.17	novel	1321	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	4	junction_1	27.0878201411631	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	71283682	71355538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71283743_71331122_71331214_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71354194_71355060_71355140_71355226
ES.19244.7	chr2	+	1220	10	NNC	ENSMUSG00000041921.17	novel	1321	10	NA	NA	6	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.0761868240726	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283682	71355509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71283743_71337140_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.8	chr2	+	1344	11	NIC	ENSMUSG00000041921.17	novel	1321	10	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	24.3969260358759	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAAACCTATTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	71283682	71355530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71283743_71331122_71331214_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19244.9	chr2	+	2982	11	NNC	ENSMUSG00000041921.17	novel	2770	9	NA	NA	8	-25	intron_retention	FALSE	canonical	0	0	junction_1	32.385336187849	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71283684	71355510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71283743_71288143_71288270_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71347392_71347497_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ES.19245.1	chr2	-	8911	1	Genic_Genomic	ENSMUSG00000084946.3	novel	NA	NA	NA	NA	6093	3538	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGCAGCTTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	71352170	71343259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_71343300_71352200
ES.19246.1	chr2	+	3185	3	FSM	ENSMUSG00000041911.4	ENSMUST00000037119.4	4111	3	927	-1	-61	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGCCTCCTGTGCTGT	2733	False	NA	NA	False	AGTAAA	-20	NA	71359383	71364325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71360651_71361300_71361501_71362607
ES.19247.1	chr2	-	158	1	Intergenic	novelGene_15961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	71398474	71398316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71398300_71398500
ES.19248.1	chr2	+	1373	5	Intergenic	novelGene_15962	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCACCTTGTCCCC	NA	False	NA	NA	False	ATTAAA	-38	NA	71486615	71507647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71486733_71487073_71487162_71505366_71505417_71506384_71506510_71506654
ES.19249.1	chr2	+	645	4	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-9939	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.7973274814304	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGACTCGGTTGCTTTC	9053	False	NA	8	True	ATTAAA	-21	NA	71539821	71561313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71539942_71547476_71547626_71560693_71560778_71561021
ES.19249.2	chr2	+	709	4	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.8884444373331	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAAGACTCGGTTGC	NA	False	NA	4	True	ATTAAA	-17	NA	71549719	71561309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71549853_71553636_71553841_71560693_71560778_71561021
ES.19249.3	chr2	+	1363	3	NNC	ENSMUSG00000064263.7	novel	641	4	NA	NA	-29	869	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAAGCATCGAGGCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	71549731	71562179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71549853_71560693_71560778_71561021
ES.19249.4	chr2	+	3190	1	Genic_Genomic	ENSMUSG00000064263.7	novel	NA	NA	NA	NA	9227	867	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACAAGCATCGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	71558987	71562177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_71559000_71562200
ES.19249.5	chr2	+	3638	1	Genic_Genomic	ENSMUSG00000064263.7	novel	NA	NA	NA	NA	9255	1343	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCTATGGTCTTCCTTT	NA	False	NA	NA	False	ACTAAA	-20	NA	71559015	71562653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_71559000_71562700
ES.1925.1	chr1	-	177	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	171985611	171985434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_171985400_171985600
ES.19250.1	chr2	+	3119	1	NIC	ENSMUSG00000027111.17	novel	707	6	NA	NA	233	-71287	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTATGTTTTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	71576192	71579311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71576200_71579300
ES.19251.1	chr2	+	5544	25	NNC	ENSMUSG00000027111.17	novel	3313	18	NA	NA	3981	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.307542689829	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGTGTACGCTTTT	NA	False	NA	113	True	TATAAA	-28	NA	71579940	71688774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71579976_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.10	chr2	+	5667	26	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-45	-191	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGCTTGTTAACACA	NA	False	NA	27	True	AATAAA	-15	NA	71617227	71688569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617343_71617416_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.11	chr2	+	5849	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-44	-75	intron_retention	FALSE	canonical	0	0	junction_10	109.030186632979	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGTCCCATATAAT	NA	False	NA	24	True	AGTAAA	-13	NA	71617228	71688685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664359_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.12	chr2	+	5681	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-44	-189	intron_retention	FALSE	non_canonical	0	0	junction_25	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCGCTTGTTAACACAGC	NA	False	NA	29	True	AATAAA	-17	NA	71617228	71688571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71687724_71687784
ES.19251.14	chr2	+	5936	26	FSM	ENSMUSG00000027111.17	ENSMUST00000028522.10	4310	26	-92	-1534	-43	-124	multi-exon	FALSE	canonical	2	7	junction_25	140.364097973805	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTCTTTGTATTT	NA	False	NA	-25	True	TATAAA	-11	NA	71617229	71688636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71683877_71684008_71686197
ES.19251.15	chr2	+	5713	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-26	-187	intron_retention	FALSE	canonical	0	0	junction_19	107.872923888867	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCTTGTTAACACAGCAT	NA	False	NA	31	True	AATAAA	-19	NA	71617246	71688573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672078_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.16	chr2	+	5836	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-7	-192	intron_retention	FALSE	canonical	0	0	junction_1	170.513220601806	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	NA	False	NA	26	True	AATAAA	-14	NA	71617265	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71633584_71633715_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671499_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.17	chr2	+	4660	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	0	418	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGTGTTTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	71617272	71687533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.18	chr2	+	4901	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	2	661	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACAGGTGCCAACAGCA	NA	False	NA	NA	False	TTTAAA	-26	NA	71617274	71687776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.19	chr2	+	3957	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	2	-270	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTGGCCTTCTTTCTC	NA	False	NA	NA	False	AATAGA	-11	NA	71617274	71686832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.2	chr2	+	5962	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-64	11	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAGTGTGTACGCT	NA	False	NA	110	True	TATAAA	-25	NA	71617208	71688771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.20	chr2	+	5673	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	2	-191	intron_retention	FALSE	canonical	0	0	junction_11	108.965686495031	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGCTTGTTAACACA	NA	False	NA	27	True	AATAAA	-15	NA	71617274	71688569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668632_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.21	chr2	+	11895	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	2	-5	intron_retention	TRUE	canonical	0	0	junction_24	109.307542689829	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGTAATTTTATTTA	NA	False	NA	94	True	TATAAA	-9	NA	71617274	71688755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71682706_71683037
ES.19251.22	chr2	+	5737	26	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	2	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	25	True	AGTAAA	-14	NA	71617274	71688686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617343_71617416_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.23	chr2	+	5898	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	4	-75	intron_retention	FALSE	canonical	0	0	junction_11	144.149400276241	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGTCCCATATAAT	NA	False	NA	24	True	AGTAAA	-13	NA	71617276	71688685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668018_71668109_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.26	chr2	+	4964	22	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-604	intron_retention	FALSE	canonical	0	0	junction_20	113.438666537295	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTCTGTCTTTTCACT	NA	False	NA	NA	False	ATTAAA	-16	NA	71617282	71688156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71679724_71679851_71686197
ES.19251.27	chr2	+	5633	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-190	intron_retention	FALSE	non_canonical	0	0	junction_6	109.064193317004	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71617282	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656010_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.28	chr2	+	4779	19	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-191	intron_retention	FALSE	non_canonical	0	0	junction_4	124.269333642499	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGCTTGTTAACACA	NA	False	NA	27	True	AATAAA	-15	NA	71617282	71688569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650529_71664345_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.29	chr2	+	4631	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	415	intron_retention	FALSE	canonical	0	0	junction_24	109.307542689829	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGAGTCTGTGTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	71617282	71687530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679835_71686197
ES.19251.30	chr2	+	5548	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-192	intron_retention	FALSE	non_canonical	0	0	junction_7	109.347679127431	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	NA	False	NA	26	True	AATAAA	-14	NA	71617282	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656781_71657056_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.31	chr2	+	5235	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-602	intron_retention	FALSE	non_canonical	0	0	junction_25	107.199447759772	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTTTTCACTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	71617282	71688158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71686804_71686843
ES.19251.32	chr2	+	5540	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-192	intron_retention	FALSE	non_canonical	0	0	junction_14	144.225301525079	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	NA	False	NA	26	True	AATAAA	-14	NA	71617282	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671152_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71687700_71687821
ES.19251.33	chr2	+	5662	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-190	intron_retention	FALSE	non_canonical	0	0	junction_14	109.408947112809	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71617282	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671014_71671146_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.34	chr2	+	5869	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	0	intron_retention	FALSE	canonical	3	4	junction_21	108.168777264976	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAATTTTATTTATTTTA	NA	False	NA	99	True	TATAAA	-14	NA	71617282	71688760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676324_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.35	chr2	+	5784	24	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-1	-191	intron_retention	FALSE	canonical	3	444	junction_19	38.7835347910485	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGCTTGTTAACACA	NA	False	NA	27	True	AATAAA	-15	NA	71617282	71688569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.36	chr2	+	5632	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-244	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACCTGTGGATATTTG	NA	False	NA	-26	True	NA	NA	NA	71617283	71688516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.39	chr2	+	5594	26	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-75	intron_retention	FALSE	non_canonical	0	0	junction_25	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGTCCCATATAAT	NA	False	NA	24	True	AGTAAA	-13	NA	71617283	71688685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71686743_71686949
ES.19251.4	chr2	+	6086	26	FSM	ENSMUSG00000027111.17	ENSMUST00000028522.10	4310	26	-108	-1668	-59	10	multi-exon	FALSE	canonical	2	7	junction_25	140.364097973805	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTAGTGTGTACGC	NA	False	NA	109	True	TATAAA	-24	NA	71617213	71688770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71683877_71684008_71686197
ES.19251.44	chr2	+	5190	26	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-188	intron_retention	FALSE	non_canonical	0	0	junction_25	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGCTTGTTAACACAGCA	NA	False	NA	30	True	AATAAA	-18	NA	71617283	71688572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71687529_71688026
ES.19251.47	chr2	+	5707	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	1	-76	intron_retention	FALSE	non_canonical	0	0	junction_25	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTAGTGTCCCATATAA	NA	False	NA	23	True	AGTAAA	-12	NA	71617284	71688684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71686633_71686724
ES.19251.5	chr2	+	6538	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-53	598	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGAGCTGTCTTTTTTCA	NA	False	NA	NA	False	TATAAA	-1	NA	71617219	71689358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.50	chr2	+	5793	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	1	-73	intron_retention	FALSE	non_canonical	0	0	junction_1	109.307542689829	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTCCCATATAATTT	NA	False	NA	26	True	AGTAAA	-15	NA	71617284	71688687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617656_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.53	chr2	+	5584	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	7	-192	intron_retention	FALSE	non_canonical	0	0	junction_4	109.328371012896	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	NA	False	NA	26	True	AATAAA	-14	NA	71617328	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652836_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.54	chr2	+	5429	26	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	52	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	107.199447759772	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCTTGTTAACACAGCAT	NA	False	NA	31	True	AATAAA	-19	NA	71617373	71688573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71686520_71686689
ES.19251.55	chr2	+	6781	25	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	94	-2644	56	999	3prime_fragment	FALSE	canonical	3	444	junction_20	38.1094686032516	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTTTCTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	71617377	71689759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.56	chr2	+	5539	25	NNC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-78	-192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	146.598374252013	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	NA	False	NA	26	True	AATAAA	-14	NA	71617404	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652892_71655848_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668617_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.57	chr2	+	3414	1	Intergenic	novelGene_15965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGGCTTCTTCGTC	NA	False	NA	NA	False	AATAAA	-14	NA	71636308	71639722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71636300_71639700
ES.19251.58	chr2	+	5387	25	NNC	ENSMUSG00000027111.17	novel	3313	18	NA	NA	18827	-197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.307542689829	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCTCATCGCTTGTT	NA	False	NA	21	True	AATAAA	-9	NA	71636309	71688563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71636399_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.59	chr2	+	5634	26	NNC	ENSMUSG00000027111.17	novel	3313	18	NA	NA	-12514	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.014921449133	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	283	False	NA	25	True	AGTAAA	-14	NA	71644591	71688686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71644723_71645001_71645084_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.6	chr2	+	4295	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-53	0	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTTTATAAACATGCAAG	NA	False	NA	NA	False	NA	NA	NA	71617219	71687115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.60	chr2	+	7466	25	NNC	ENSMUSG00000027111.17	novel	3313	18	NA	NA	-12509	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.307542689829	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	288	False	NA	28	True	AATAAA	-16	NA	71644596	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71646758_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.61	chr2	+	5208	24	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-10087	-190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.6546965718	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	2710	False	NA	28	True	AATAAA	-16	NA	71647018	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71647099_71648824_71648893_71650382_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.62	chr2	+	5218	22	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	33058	-1572	-6764	-73	3prime_fragment	FALSE	canonical	3	444	junction_17	40.1502845752545	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTCCCATATAATTT	6033	False	NA	26	True	AGTAAA	-15	NA	71650341	71688687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.63	chr2	+	5094	22	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	33058	-1448	-6764	-197	3prime_fragment	FALSE	canonical	3	444	junction_17	40.1502845752545	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCTCATCGCTTGTT	6033	False	NA	21	True	AATAAA	-9	NA	71650341	71688563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.64	chr2	+	6597	20	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-6764	-192	intron_retention	FALSE	canonical	0	0	junction_8	119.999215140554	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCGCTTGTTAACAC	6033	False	NA	26	True	AATAAA	-14	NA	71650341	71688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668582_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.65	chr2	+	4434	21	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	35496	-1043	-4326	-602	3prime_fragment	FALSE	canonical	3	444	junction_16	40.0523407555663	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTTTTCACTCA	8471	False	NA	NA	False	ATTAAA	-18	NA	71652779	71688158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.66	chr2	+	4961	21	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	35496	-1570	-4326	-75	3prime_fragment	FALSE	canonical	3	444	junction_16	40.0523407555663	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGTCCCATATAAT	8471	False	NA	24	True	AGTAAA	-13	NA	71652779	71688685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.67	chr2	+	5030	20	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	38368	-1572	-1454	-73	3prime_fragment	FALSE	canonical	3	444	junction_15	40.8513283129294	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTCCCATATAATTT	NA	False	NA	26	True	AGTAAA	-15	NA	71655651	71688687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.68	chr2	+	4523	19	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-1180	-190	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	123.669274705453	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71655925	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.69	chr2	+	3674	22	NNC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	-1059	-191	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	155.834553816749	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGCTTGTTAACACA	NA	False	NA	27	True	AATAAA	-15	NA	71656046	71688569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197_71686744_71687436_71687892_71688041
ES.19251.7	chr2	+	5357	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-49	-579	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTTTACAAATGATGCC	NA	False	NA	NA	False	ATTAAA	-41	NA	71617223	71688181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.71	chr2	+	4170	16	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	46749	-1519	-4392	-126	3prime_fragment	FALSE	canonical	3	444	junction_11	39.2193829630197	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCCTTTCTTTGTAT	NA	False	NA	-27	True	TATAAA	-9	NA	71664032	71688634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.72	chr2	+	3894	13	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	51637	-1571	496	-74	3prime_fragment	FALSE	canonical	3	444	junction_8	37.0985923662281	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTGTCCCATATAATT	NA	False	NA	25	True	AGTAAA	-14	NA	71668920	71688686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.73	chr2	+	3545	12	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	603	-190	combination_of_known_splicesites	FALSE	canonical	2	10	junction_11	153.457992206013	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCGCTTGTTAACACAG	NA	False	NA	28	True	AATAAA	-16	NA	71669027	71688570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71686197
ES.19251.74	chr2	+	3174	6	ISM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	56188	-1646	5047	1	3prime_fragment	FALSE	canonical	3	444	junction_1	46.8119642826489	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTTATTTATTTTAG	NA	False	NA	100	True	TATAAA	-15	NA	71673471	71688761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.76	chr2	+	3042	1	NIC	ENSMUSG00000027111.17	novel	2721	3	NA	NA	4708	415	mono-exon	FALSE	NA	NA	NA	NA	NA	797	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGAGTCTGTGTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	71684488	71687530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71684500_71687500
ES.19251.77	chr2	+	2378	1	NIC	ENSMUSG00000027111.17	novel	2721	3	NA	NA	6415	-187	mono-exon	FALSE	NA	NA	NA	NA	NA	806	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCTTGTTAACACAGCAT	NA	False	NA	31	True	AATAAA	-19	NA	71686195	71688573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71686200_71688600
ES.19251.8	chr2	+	5818	25	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-49	-118	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTGTATTTCATCAA	NA	False	NA	-19	True	TATAAA	-17	NA	71617223	71688642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ES.19251.9	chr2	+	5734	24	NIC	ENSMUSG00000027111.17	novel	4310	26	NA	NA	-48	-75	intron_retention	FALSE	canonical	2	10	junction_23	109.224470138915	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAGTGTCCCATATAAT	NA	False	NA	24	True	AGTAAA	-13	NA	71617224	71688685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71686197
ES.19252.1	chr2	-	6334	1	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTTTTTTGTTTG	NA	False	NA	NA	False	AATAGA	-21	NA	71573376	71567042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71567000_71573400
ES.19252.2	chr2	-	1238	5	Antisense	novelGene_ENSMUSG00000084794.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.27760839478607	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCTACAGTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	71580680	71568197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71568487_71573802_71573970_71577847_71578240_71579212_71579277_71580354
ES.19252.3	chr2	-	813	4	Antisense	novelGene_ENSMUSG00000084794.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0.471404520791032	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGCTTAAGATGTCTA	NA	False	NA	NA	False	NA	NA	NA	71580660	71568207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71568487_71573802_71573967_71579212_71579277_71580354
ES.19252.4	chr2	-	2937	3	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGGCTGTCCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71575615	71571129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71573596_71573802_71573967_71575308
ES.19252.5	chr2	-	3146	2	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTTGAGGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	71575619	71571134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71573970_71575308
ES.19252.6	chr2	-	2762	3	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	2	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTAAACTTTGAGGCTGT	NA	False	NA	NA	False	NA	NA	NA	71575585	71571137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71573596_71573802_71573967_71575445
ES.19252.7	chr2	-	2166	2	Antisense	novelGene_ENSMUSG00000087570.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTGGCTGAACTTTGG	NA	False	NA	NA	False	NA	NA	NA	71575635	71572130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71573970_71575308
ES.19252.8	chr2	-	4107	1	Antisense	novelGene_ENSMUSG00000084794.2_AS_novelGene_ENSMUSG00000086641.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTAAGCCCTCTCAGGC	NA	False	NA	NA	False	AATAAA	-11	NA	71580663	71576556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71576600_71580700
ES.19253.1	chr2	-	176	1	Intergenic	novelGene_15963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGCTCTAATCA	NA	False	NA	NA	False	NA	NA	NA	71596942	71596766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71596800_71596900
ES.19254.1	chr2	-	180	1	Intergenic	novelGene_15964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAATAAAATG	NA	False	NA	NA	False	NA	NA	NA	71629491	71629311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71629300_71629500
ES.19255.1	chr2	-	173	1	Intergenic	novelGene_15966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAATGCAACAAGA	NA	False	NA	NA	False	NA	NA	NA	71665767	71665594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71665600_71665800
ES.19256.1	chr2	+	3371	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	-16	1830	-16	42	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCTTAAGAGCTAAGAAA	NA	False	NA	53	True	ATTAAA	-17	NA	71703551	71732372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.10	chr2	+	5990	9	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-11	3	intron_retention	FALSE	canonical	3	206	junction_6	22.0166840146285	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCCTCTCCAAGGAATT	NA	False	NA	14	True	AATAAA	-26	NA	71703652	71732333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.12	chr2	+	3186	11	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.1873692331795	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTGCCCTCTCCAA	NA	False	NA	8	True	AATAAA	-20	NA	71703661	71732327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717853_71717901_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.13	chr2	+	2036	9	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-13	intron_retention	FALSE	canonical	0	0	junction_1	76.7796156215958	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATATTTTTTTAAATTG	NA	False	NA	NA	False	ATTAAA	-28	NA	71703661	71726824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71704163_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032
ES.19256.14	chr2	+	3139	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	76.2235179676065	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTGCCCTCTCCAA	NA	False	NA	8	True	AATAAA	-20	NA	71703661	71732327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.15	chr2	+	1155	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-23	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	69.763268130492	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTTTAATATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71703661	71726814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71726761
ES.19256.16	chr2	+	3286	11	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.9715012864611	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703661	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717658_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.17	chr2	+	4900	10	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_6	76.5259578327656	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703661	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71718162_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.18	chr2	+	5008	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.4129286523335	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTGTAGTCTTCATA	NA	False	NA	10	True	ATTAAA	-20	NA	71703661	71734191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71705749_71705892_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.19	chr2	+	5442	10	ISM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	94	1872	-2	0	intron_retention	FALSE	canonical	3	206	junction_8	19.7902582344863	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703661	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990
ES.19256.2	chr2	+	1611	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	-11	3585	-11	-1713	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGTGTTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	71703556	71730617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.20	chr2	+	2938	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-2	-1712	intron_retention	FALSE	canonical	3	206	junction_7	21.178838728234	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGTGTTGGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	71703667	71730618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.21	chr2	+	1510	10	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	5	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	93.2261289076786	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATATTTTTTTAAATT	NA	False	NA	NA	False	ATTAAA	-27	NA	71703674	71726823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71718162_71719239_71719339_71726032_71726144_71726761
ES.19256.22	chr2	+	4443	10	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	3	-425	intron_retention	FALSE	canonical	0	0	junction_3	97.9816057315269	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTCTTGACATGTTTT	NA	False	NA	NA	False	AAAACA	-1	NA	71703692	71731905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71703910_71705749_71705892_71710382_71710455_71713774_71713952_71714186_71714277_71716325_71718169_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.23	chr2	+	3046	10	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	73.9676272199076	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703692	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703910_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.24	chr2	+	2747	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	143	2295	21	-423	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTTGACATGTTTTAT	NA	False	NA	NA	False	AAAACA	-3	NA	71703710	71731907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.25	chr2	+	1727	9	ISM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	156	7372	34	-7	5prime_fragment	FALSE	canonical	3	206	junction_8	16.3477827242718	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAAATTGTATGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	71703723	71726830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032
ES.19256.26	chr2	+	3083	11	NNC	ENSMUSG00000006494.12	novel	2596	4	NA	NA	190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0534735656012	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71704276	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71704389_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.27	chr2	+	4479	8	NNC	ENSMUSG00000006494.12	novel	2972	9	NA	NA	4998	0	intron_retention	FALSE	canonical	2	2	junction_4	85.5632001767687	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71710420	71732330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71710455_71713766_71713952_71714186_71714277_71716325_71718169_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.28	chr2	+	5465	5	NNC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-876	-17	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	106.640752060364	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCTTTGCCTGTAGTC	NA	False	NA	4	True	ATTAAA	-14	NA	71716885	71734185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_71718169_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.29	chr2	+	6215	4	ISM	ENSMUSG00000006494.12	ENSMUST00000156036.8	2972	9	13519	-1857	-553	-15	3prime_fragment	FALSE	canonical	3	206	junction_1	26.1321428300262	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGCCTGTAGTCTT	NA	False	NA	6	True	ATTAAA	-16	NA	71717208	71734187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.3	chr2	+	5194	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	-11	2	-11	-2	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCATATTTCTGTAG	NA	False	NA	19	True	ATTAAA	-29	NA	71703556	71734200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.30	chr2	+	3612	3	ISM	ENSMUSG00000006494.12	ENSMUST00000156036.8	2972	9	19244	1715	5172	-1715	3prime_fragment	FALSE	canonical	3	257	junction_2	4	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGATGTGTTGGGTT	3544	False	NA	NA	False	NA	NA	NA	71722933	71730615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_71726144_71727990_71728105_71730327
ES.19256.5	chr2	+	1905	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	12	3268	12	-1396	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTTTTTGCAGTGGAT	NA	False	NA	NA	False	AATGAA	-12	NA	71703579	71730934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.6	chr2	+	1217	1	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	22	-9145	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTGCTACTGTTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	71703589	71704806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71703600_71704800
ES.19256.7	chr2	+	3491	11	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	73.0534735656012	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGCCCTCTCCAAG	NA	False	NA	9	True	AATAAA	-21	NA	71703640	71732328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_71704163_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.8	chr2	+	2561	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	73	2551	-23	-679	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTATTGATGTTATTT	NA	False	NA	NA	False	TTTAAA	-17	NA	71703640	71731651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19256.9	chr2	+	3177	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	76	1932	-20	-60	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATTTTGGAATCTTT	NA	False	NA	-49	True	NA	NA	NA	71703643	71732270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ES.19257.1	chr2	-	1937	1	Antisense	novelGene_ENSMUSG00000006494.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGGAACCCTAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	71726126	71724189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_71724200_71726100
ES.19258.1	chr2	-	4410	3	Intergenic	novelGene_15967	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	5706	False	NA	NA	False	TTTAAA	-39	NA	71740050	71734845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71736190_71736590_71736656_71737049
ES.19259.1	chr2	+	260	1	Intergenic	novelGene_15968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGCCTACCAACCCAG	9723	False	NA	NA	False	NA	NA	NA	71755565	71755825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71755600_71755800
ES.1926.1	chr1	-	2479	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	23	-1	23	1	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGATTCTAGAATCTC	NA	False	NA	-3	True	AATAAA	-21	NA	172034348	172024293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ES.1926.2	chr1	-	3584	3	NNC	ENSMUSG00000013698.13	novel	2501	4	NA	NA	-13	0	intron_retention	FALSE	canonical	2	2	junction_2	53	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034277	172024294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172026258_172026677_172028185_172034163
ES.1926.3	chr1	-	2439	4	NNC	ENSMUSG00000013698.13	novel	2501	4	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	54.0431926024607	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTACCTGACTGATTCTA	NA	False	NA	-10	True	AATAAA	-14	NA	172034277	172024300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172026258_172026677_172026834_172027974_172028149_172034125
ES.1926.4	chr1	-	1626	4	NNC	ENSMUSG00000013698.13	novel	2501	4	NA	NA	-33	-725	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.2217830461547	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTTTTTGTGGTTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	172034297	172025019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172026258_172026677_172026758_172027974_172028149_172034163
ES.1926.5	chr1	-	1721	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	55	725	-52	-725	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTTTTTGTGGTTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	172034316	172025019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ES.1926.6	chr1	-	1721	4	NNC	ENSMUSG00000013698.13	novel	2501	4	NA	NA	-17	-728	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	54.0431926024607	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCCTTTTTTGTGGTT	NA	False	NA	-9	True	ATTAAA	-14	NA	172034281	172025022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172026258_172026677_172026834_172027974_172028149_172034125
ES.19260.1	chr2	-	176	1	Intergenic	novelGene_15969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTCCTAACC	NA	False	NA	NA	False	NA	NA	NA	71793791	71793615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71793600_71793800
ES.19261.1	chr2	-	1493	1	Intergenic	novelGene_15970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTTGTCTCTGAACTT	NA	False	NA	NA	False	NA	NA	NA	71878234	71876741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71876700_71878200
ES.19262.1	chr2	-	158	1	Intergenic	novelGene_15971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	71902766	71902608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71902600_71902800
ES.19263.1	chr2	+	175	1	Intergenic	novelGene_15972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAGAATAGTG	NA	False	NA	NA	False	NA	NA	NA	71903188	71903363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_71903200_71903400
ES.19264.1	chr2	-	173	1	Intergenic	novelGene_15973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71917047	71916874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_71916900_71917000
ES.19265.1	chr2	+	6759	11	NIC	ENSMUSG00000004085.15	novel	6663	12	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	10.4599235178848	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTATGTGTCGCT	3127	False	NA	NA	False	AATAAA	-16	NA	72115873	72237846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72116200_72128531_72128725_72185901_72185990_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ES.19265.10	chr2	+	1003	1	Intergenic	novelGene_15975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTTAGAGCCCATG	2948	False	NA	NA	False	NA	NA	NA	72215608	72216611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72215600_72216600
ES.19265.11	chr2	+	5515	1	NIC	ENSMUSG00000004085.15	novel	6663	12	NA	NA	104087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTATGTGTCGCT	4394	False	NA	NA	False	AATAAA	-16	NA	72232331	72237846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72232300_72237800
ES.19265.2	chr2	+	6749	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	-86	0	5	0	multi-exon	FALSE	canonical	3	17	junction_11	6.87671841784634	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTATGTGTCGCT	3239	False	NA	NA	False	AATAAA	-16	NA	72115985	72237846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ES.19265.3	chr2	+	3245	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	87	2	-4	-2	multi-exon	FALSE	canonical	2	3	junction_12	12.7949955590981	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGATTGTATGGTGGC	3321	False	NA	NA	False	AATAAA	-20	NA	72116067	72272952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
ES.19265.4	chr2	+	1129	11	NNC	ENSMUSG00000004085.15	novel	1925	11	NA	NA	12	-1535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.2445542374965	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGTGGAGAAAAA	3337	False	NA	NA	False	NA	NA	NA	72116083	72228046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72227918
ES.19265.6	chr2	+	3088	19	NIC	ENSMUSG00000004085.15	novel	3334	20	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	12.4286854583348	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGATTGTATGGTGG	3375	False	NA	NA	False	AATAAA	-19	NA	72116121	72272951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72116200_72128531_72128725_72185901_72185990_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
ES.19265.7	chr2	+	6388	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	105	170	39	-170	multi-exon	FALSE	canonical	3	17	junction_11	6.87671841784634	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGTTTAGTTGCCG	3430	False	NA	NA	False	ATTAAA	-16	NA	72116176	72237676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ES.19265.8	chr2	+	4448	1	Intergenic	novelGene_15974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATCAAGACAAGGAGAT	9360	False	NA	NA	False	AAAAAG	-4	NA	72122106	72126554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72122100_72126600
ES.19265.9	chr2	+	6538	11	ISM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	12456	1	283	-1	3prime_fragment	FALSE	canonical	3	17	junction_10	7.21179589284112	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGTTATGTGTCGC	NA	False	NA	NA	False	AATAAA	-15	NA	72128527	72237845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ES.19266.1	chr2	-	179	1	Intergenic	novelGene_15976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	72285223	72285044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72285000_72285200
ES.19267.1	chr2	+	2641	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	-214	-3	-214	3	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTGTTTTTT	8355	False	NA	NA	False	AATAAA	-19	NA	72306288	72317240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.10	chr2	+	4068	6	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	28	-4	intron_retention	FALSE	canonical	3	1115	junction_3	103.017280103874	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGTGTTTATTTTT	8597	False	NA	NA	False	AATAAA	-12	NA	72306530	72317233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72313906_72314222_72314361_72314942
ES.19267.11	chr2	+	5897	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	28	-3	intron_retention	FALSE	canonical	3	1115	junction_2	81.5897597060372	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8597	False	NA	NA	False	AATAAA	-13	NA	72306530	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72312293_72312772_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.12	chr2	+	4986	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	29	-3	intron_retention	FALSE	canonical	3	1115	junction_2	75.3408580914711	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8598	False	NA	NA	False	AATAAA	-13	NA	72306531	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.14	chr2	+	6638	5	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	31	-3	intron_retention	FALSE	canonical	3	1115	junction_2	94.512895945474	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8600	False	NA	NA	False	AATAAA	-13	NA	72306533	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72312293_72312772_72314361_72314942_72315657_72316063
ES.19267.15	chr2	+	5368	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	32	-3	intron_retention	FALSE	canonical	3	1115	junction_2	83.4540791892963	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8601	False	NA	NA	False	AATAAA	-13	NA	72306534	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72312293_72312772_72312857_72313698_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.16	chr2	+	4553	5	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	38	-1	intron_retention	FALSE	canonical	3	1115	junction_3	109.554780817635	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8607	False	NA	NA	False	AATAAA	-15	NA	72306540	72317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72315657_72316063
ES.19267.17	chr2	+	3541	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	38	-4	intron_retention	FALSE	canonical	3	1115	junction_3	92.2129178706661	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGTGTTTATTTTT	8607	False	NA	NA	False	AATAAA	-12	NA	72306540	72317233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.18	chr2	+	2697	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1115	junction_3	90.8358016265771	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8612	False	NA	NA	False	AATAAA	-15	NA	72306545	72317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.19	chr2	+	7142	4	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1115	junction_2	103.782893045477	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8612	False	NA	NA	False	AATAAA	-15	NA	72306545	72317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72309373_72312034_72312293_72312772_72315657_72316063
ES.19267.2	chr2	+	2599	10	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-73	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	503.918644227419	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8496	False	NA	NA	False	AATAAA	-13	NA	72306429	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72309957_72310063_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.20	chr2	+	2570	10	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	512.59632036752	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8613	False	NA	NA	False	AATAAA	-13	NA	72306546	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72306656_72306829_72307023_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.21	chr2	+	3103	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	44	-1	intron_retention	FALSE	canonical	3	1115	junction_3	97.1569463405588	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8613	False	NA	NA	False	AATAAA	-15	NA	72306546	72317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72314361_72314942_72315093_72315519
ES.19267.22	chr2	+	8090	2	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	48	3	-46	-3	intron_retention	FALSE	canonical	3	1379	junction_1	0	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8617	False	NA	NA	False	AATAAA	-13	NA	72306550	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_72306656_72309249
ES.19267.23	chr2	+	2333	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	418.47772864873	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8621	False	NA	NA	False	AATAAA	-13	NA	72306554	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313870_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.24	chr2	+	3517	6	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-39	-3	intron_retention	FALSE	canonical	3	1115	junction_3	105.488577580703	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8624	False	NA	NA	False	AATAAA	-13	NA	72306557	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72314361_72314942
ES.19267.25	chr2	+	2772	8	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	56	3	-38	-3	intron_retention	FALSE	canonical	3	1115	junction_3	92.5429850482069	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8625	False	NA	NA	False	AATAAA	-13	NA	72306558	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519
ES.19267.26	chr2	+	3208	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	1115	junction_3	88.7849959745681	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTTTATTTTTGT	8625	False	NA	NA	False	AATAAA	-14	NA	72306558	72317235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.27	chr2	+	3107	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	1115	junction_3	96.9616189817165	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8627	False	NA	NA	False	AATAAA	-13	NA	72306560	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72314361_72314942_72315657_72316063
ES.19267.28	chr2	+	3369	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-33	-3	intron_retention	FALSE	canonical	3	1115	junction_3	98.3622838738959	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8630	False	NA	NA	False	AATAAA	-13	NA	72306563	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72315657_72316063
ES.19267.29	chr2	+	2787	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-33	-3	intron_retention	FALSE	canonical	3	1115	junction_3	91.5485819504751	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8630	False	NA	NA	False	AATAAA	-13	NA	72306563	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315657_72316063
ES.19267.3	chr2	+	3769	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	10	-1355	10	1355	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAACTAATGGCAACCCT	8579	False	NA	NA	False	NA	NA	NA	72306512	72318592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.31	chr2	+	5270	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-33	-4	intron_retention	FALSE	canonical	3	1115	junction_2	80.2530719384346	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGTGTTTATTTTT	8630	False	NA	NA	False	AATAAA	-12	NA	72306563	72317233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72309373_72312034_72312293_72312772_72312857_72313698_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.32	chr2	+	4340	5	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	1115	junction_3	110.150748976119	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8643	False	NA	NA	False	AATAAA	-13	NA	72306576	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72314361_72314942
ES.19267.33	chr2	+	6674	4	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	2165	-4	intron_retention	FALSE	canonical	0	0	junction_2	552.031601349858	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGTGTTTATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	72308898	72317233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72312293_72312772_72312857_72313630_72315657_72316063
ES.19267.4	chr2	+	3674	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	16	-3	intron_retention	FALSE	canonical	3	1115	junction_3	94.9012644805115	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8585	False	NA	NA	False	AATAAA	-13	NA	72306518	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72313906_72314222_72314361_72314942_72315657_72316063
ES.19267.5	chr2	+	2350	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	418.289896483288	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8586	False	NA	NA	False	AATAAA	-13	NA	72306519	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315573_72315657_72316063
ES.19267.6	chr2	+	3504	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	18	-3	intron_retention	FALSE	canonical	0	0	junction_2	412.081738706048	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	8587	False	NA	NA	False	AATAAA	-13	NA	72306520	72317234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72306656_72309249_72310474_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ES.19267.8	chr2	+	3989	6	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	20	-1	intron_retention	FALSE	canonical	3	1115	junction_3	100.472085675575	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTTTATTTTTGTT	8589	False	NA	NA	False	AATAAA	-15	NA	72306522	72317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72314361_72314942_72315657_72316063
ES.19267.9	chr2	+	5464	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	22	-7	intron_retention	FALSE	canonical	3	1115	junction_2	84.60578519752	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAACTTGTGTGTTTATT	8591	False	NA	NA	False	AATAAA	-9	NA	72306524	72317230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_72306656_72309249_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519
ES.19268.1	chr2	+	172	1	Intergenic	novelGene_15977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATTAATTTG	NA	False	NA	NA	False	NA	NA	NA	72495796	72495968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72495800_72496000
ES.19269.1	chr2	+	994	3	Intergenic	novelGene_15978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACACTATTGAGTTG	NA	False	NA	NA	False	NA	NA	NA	72497964	72502815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72498031_72500915_72501123_72502094
ES.19269.2	chr2	+	131	2	Intergenic	novelGene_15979	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTATTTTGTGGTAAGG	NA	False	NA	NA	False	NA	NA	NA	72497967	72498828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72498031_72498760
ES.19269.3	chr2	+	4856	1	Intergenic	novelGene_15980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTGAGTTGGATAAGTA	NA	False	NA	NA	False	NA	NA	NA	72497967	72502823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72498000_72502800
ES.19269.4	chr2	+	1249	4	Intergenic	novelGene_15981	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTATTGAGTTGGATAAG	NA	False	NA	NA	False	NA	NA	NA	72497970	72502821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72498031_72498760_72498936_72500835_72501123_72502094
ES.1927.2	chr1	-	3137	9	NIC	ENSMUSG00000007122.12	novel	1847	11	NA	NA	206	-2	intron_retention	FALSE	canonical	0	0	junction_8	2.57087047515039	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGTGTCTGTTGTTG	5601	False	NA	NA	False	AATAAA	-17	NA	172047076	172037463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172039590_172040594_172040959_172041372_172041419_172042578_172042710_172043043_172043118_172043475_172043588_172044360_172044462_172045456_172045542_172046978
ES.1927.3	chr1	-	1512	11	NNC	ENSMUSG00000007122.12	novel	1847	11	NA	NA	361	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.13541565040626	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCAAGTGTCTGTTGT	5756	False	NA	NA	False	AATAAA	-15	NA	172046921	172037465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172038071_172039514_172039590_172040594_172040696_172040903_172040959_172041372_172041419_172042578_172042710_172043043_172043118_172043475_172043588_172044360_172044462_172045456_172045542_172046794
ES.19270.1	chr2	-	146	1	Intergenic	novelGene_15982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGATTTATTATTAAT	NA	False	NA	NA	False	NA	NA	NA	72509592	72509446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72509400_72509600
ES.19271.1	chr2	+	175	1	Intergenic	novelGene_15983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGACA	NA	False	NA	NA	False	NA	NA	NA	72514371	72514546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72514400_72514500
ES.19272.1	chr2	-	204	1	Intergenic	novelGene_15984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGTATGGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	72756171	72755967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72756000_72756200
ES.19273.1	chr2	-	2823	1	Intergenic	novelGene_15985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTTGAATTCCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	72763858	72761035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72761000_72763900
ES.19274.1	chr2	+	2809	1	Genic_Genomic	ENSMUSG00000063714.16	novel	NA	NA	NA	NA	-13	-6223	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAACATCAGCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	72809754	72812563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_72809800_72812600
ES.19274.2	chr2	+	2368	2	NNC	ENSMUSG00000063714.16	novel	370	3	NA	NA	-11	-6223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAACATCAGCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	72809756	72812563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72809790_72810228
ES.19274.3	chr2	+	512	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	-5	76	-5	-6	multi-exon	FALSE	canonical	1	97	junction_1	49.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAATCTCCTGCA	NA	False	NA	14	True	NA	NA	NA	72809762	72818945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72809940_72817871_72817977_72818715
ES.19274.6	chr2	+	3311	1	Intergenic	novelGene_15988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTCAAGGAACAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	72813239	72816550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72813200_72816600
ES.19274.7	chr2	+	424	3	NNC	ENSMUSG00000063714.16	novel	628	2	NA	NA	-1506	-6	at_least_one_novel_splicesite	FALSE	canonical	2	72	junction_1	62	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAATCTCCTGCA	NA	False	NA	14	True	NA	NA	NA	72816078	72818945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_72816168_72817871_72817977_72818715
ES.19275.1	chr2	-	4222	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-35	-6	-35	6	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCTAATTTCTTAGC	2850	False	NA	-6	True	ATTAAA	-31	NA	72810825	72766764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.10	chr2	-	3960	6	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	39	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	165.731590229503	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAGCTTGAAAAAG	4084	False	NA	-20	True	ATTAAA	-17	NA	72809591	72766778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809275_72809362
ES.19275.12	chr2	-	4214	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	228	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	168.904065473077	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAAATTTAGCTTGAAA	3133	False	NA	-23	True	ATTAAA	-14	NA	72810542	72766781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810301
ES.19275.13	chr2	-	3802	6	NNC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	10	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	207.644311263275	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATAGAGGTGCTGGCAA	2915	False	NA	-1	True	AATAAA	-20	NA	72810760	72766845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809915_72810673
ES.19275.15	chr2	-	3915	5	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	-8	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.256424254711	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGTGTATAGAGGT	4037	False	NA	-9	True	AATAAA	-12	NA	72809638	72766853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768684_72770948_72771084_72776889_72777083_72800498_72801859_72809241
ES.19275.16	chr2	-	3920	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	38	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	170.886577068599	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGTGTATAGAGGT	2943	False	NA	-9	True	AATAAA	-12	NA	72810732	72766853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809277_72809853_72809977_72810593
ES.19275.17	chr2	-	4470	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-505	216	-505	5	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAGTCCGATGCATCT	2380	False	NA	3	True	AATAAA	-27	NA	72811295	72766986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.2	chr2	-	4448	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-353	-225	-353	0	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTGAAAAAGTCTAATTT	3692	False	NA	-12	True	ATTAAA	-25	NA	72809983	72766770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
ES.19275.20	chr2	-	4009	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-499	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.777128532737	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTAGTCCGATGCA	3546	False	NA	0	True	AATAAA	-24	NA	72810129	72766989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72791617_72791709_72800498_72801859_72809241_72809374_72809830
ES.19275.21	chr2	-	3693	5	NIC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	181.408379078807	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTAGTCCGATGC	2875	False	NA	-1	True	AATAAA	-23	NA	72810800	72766990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72810593
ES.19275.23	chr2	-	3839	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	-30	-1	-10	1	multi-exon	FALSE	canonical	2	7	junction_4	184.227685215876	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTAGTCCGATGC	2875	False	NA	-1	True	AATAAA	-23	NA	72810800	72766990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
ES.19275.27	chr2	-	3005	5	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	-633	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.290818714798	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTTGTAGTCCGAT	NA	False	NA	-3	True	AATAAA	-21	NA	72801443	72766992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72767382_72767445_72768727_72770886_72771084_72776889_72777083_72800498
ES.19275.28	chr2	-	2479	4	NIC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	205.896953730636	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTTGTTGTAGTCC	4076	False	NA	-6	True	AATAAA	-18	NA	72809599	72766995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72809241
ES.19275.29	chr2	-	2090	4	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	-5502	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	212.132034355964	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	NA	False	NA	-7	True	AATAAA	-17	NA	72776930	72766996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72772228_72772351_72776889
ES.19275.3	chr2	-	4057	6	NNC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	186.301261402064	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	2856	False	NA	-15	True	ATTAAA	-22	NA	72810819	72766773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809848_72809977_72810593
ES.19275.30	chr2	-	3865	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	170.886577068599	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	2855	False	NA	-7	True	AATAAA	-17	NA	72810820	72766996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809283_72809859_72809977_72810593
ES.19275.31	chr2	-	4057	8	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	188.495330965832	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	2877	False	NA	-7	True	AATAAA	-17	NA	72810798	72766996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72802113_72802208_72809241_72809374_72809830_72809977_72810593
ES.19275.32	chr2	-	3840	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-473	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	169.185959490996	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	3572	False	NA	-7	True	AATAAA	-17	NA	72810103	72766996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809994_72810038
ES.19275.33	chr2	-	3959	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	169.185959490996	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTTTGTTGTAGTC	2874	False	NA	-7	True	AATAAA	-17	NA	72810801	72766996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810600
ES.19275.34	chr2	-	3729	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	-42	121	-22	-117	multi-exon	FALSE	canonical	2	7	junction_4	184.227685215876	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAATTCTGTTCATTTG	2863	False	NA	-123	True	NA	NA	NA	72810812	72767112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
ES.19275.35	chr2	-	3540	5	NIC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	-36	-174	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	181.408379078807	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTACACTTTTCCTAC	2849	False	NA	NA	False	AATAAA	-22	NA	72810826	72767169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72810593
ES.19275.36	chr2	-	4272	6	NIC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-33	-174	intron_retention	FALSE	canonical	3	107	junction_5	124.876899384954	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTACACTTTTCCTAC	2852	False	NA	NA	False	AATAAA	-22	NA	72810823	72767169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809977_72810593
ES.19275.38	chr2	-	4262	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-482	401	-482	-176	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTACACTTTTCCT	2403	False	NA	NA	False	AATAAA	-20	NA	72811272	72767171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.4	chr2	-	4016	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.795137957439	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	2941	False	NA	-15	True	ATTAAA	-22	NA	72810734	72766773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768621_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.40	chr2	-	3664	6	NIC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-31	-177	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	165.731590229503	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCTCTACACTTTTCC	2854	False	NA	NA	False	AATAAA	-19	NA	72810821	72767172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72810593
ES.19275.41	chr2	-	3410	5	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	-329	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	185.290818714798	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCTCTACACTTTTCC	3716	False	NA	NA	False	AATAAA	-19	NA	72809959	72767172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809853
ES.19275.42	chr2	-	3667	6	NNC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	-31	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	186.301261402064	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGCTCTACACTTTT	2854	False	NA	NA	False	AATAAA	-17	NA	72810821	72767174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809839_72809977_72810593
ES.19275.44	chr2	-	3584	7	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	38	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	170.886577068599	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGCTGGTCTTGTAA	2943	False	NA	NA	False	AATAAA	-2	NA	72810732	72767189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809283_72809859_72809977_72810593
ES.19275.47	chr2	-	3485	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	3	693	3	-468	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACATAACAAAATCACT	2888	False	NA	93	True	AATAAA	-12	NA	72810787	72767463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.48	chr2	-	3336	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	34	811	14	-586	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGAATTTTTTTTTTT	2919	False	NA	-25	True	NA	NA	NA	72810756	72767581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.49	chr2	-	1214	4	ISM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	9034	1005	214	623	3prime_fragment	FALSE	canonical	3	407	junction_3	18.3545331972483	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTGGAATTTTTATT	NA	False	NA	NA	False	TATAAA	-16	NA	72800596	72768000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498
ES.19275.5	chr2	-	3993	5	NNC	ENSMUSG00000027109.17	novel	3870	5	NA	NA	-499	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	185.290818714798	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	3546	False	NA	-15	True	ATTAAA	-22	NA	72810129	72766773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809839
ES.19275.50	chr2	-	6809	3	ISM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	26714	1146	-11488	482	3prime_fragment	FALSE	canonical	3	421	junction_2	15	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCGAATGGTAGTCTAA	NA	False	NA	NA	False	TATAAA	-18	NA	72782916	72768141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72768727_72770886_72771084_72776889
ES.19275.51	chr2	-	2667	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	-20	1223	-20	405	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATTTTGTAGGTACTTT	4025	False	NA	NA	False	ATTAAA	-16	NA	72809650	72768218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
ES.19275.52	chr2	-	5948	2	FSM	ENSMUSG00000027109.17	ENSMUST00000141372.2	655	2	-4	-5289	-4	-2827	multi-exon	FALSE	canonical	3	407	junction_1	0	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATGACTTTGAATAAA	NA	False	NA	NA	False	AATAAA	-19	NA	72800814	72771450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72777083_72800498
ES.19275.54	chr2	-	2219	5	ISM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-22	9950	-22	19	5prime_fragment	FALSE	canonical	3	107	junction_4	129.825604177296	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCTTTAAAGTAAATTTG	2863	False	NA	NA	False	NA	NA	NA	72810812	72776720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ES.19275.55	chr2	-	3324	2	NNC	ENSMUSG00000027109.17	novel	4181	7	NA	NA	-535	-21095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72801345	72797834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_72800312_72800498
ES.19275.56	chr2	-	1833	3	ISM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	-32	41145	-32	-31176	5prime_fragment	FALSE	canonical	3	107	junction_2	5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTCAGAATGTGCTTA	2853	False	NA	NA	False	AATAAA	-35	NA	72810822	72807915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72809374_72809830_72809977_72810593
ES.19275.7	chr2	-	4078	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	-52	-218	-32	-3	multi-exon	FALSE	canonical	2	7	junction_4	184.227685215876	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	2853	False	NA	-15	True	ATTAAA	-22	NA	72810822	72766773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
ES.19275.8	chr2	-	3930	5	NIC	ENSMUSG00000027109.17	novel	3808	6	NA	NA	-30	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	181.408379078807	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGCTTGAAAAAGTCTAA	2855	False	NA	-15	True	ATTAAA	-22	NA	72810820	72766773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72810593
ES.19276.1	chr2	-	3783	1	Intergenic	novelGene_15986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAACTAAACGCTCCCA	NA	False	NA	NA	False	AATACA	-32	NA	72815488	72811705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72811700_72815500
ES.19276.2	chr2	-	3419	1	Intergenic	novelGene_15987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTCCAAAAAGGCTTCTG	NA	False	NA	NA	False	AAAACA	-7	NA	72815487	72812068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72812100_72815500
ES.19277.1	chr2	+	2670	1	Intergenic	novelGene_15989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72821999	72824669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72822000_72824700
ES.19278.1	chr2	-	166	1	Intergenic	novelGene_15990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72825218	72825052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72825100_72825200
ES.19279.1	chr2	-	383	1	Intergenic	novelGene_15991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTTTGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	72830104	72829721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72829700_72830100
ES.1928.1	chr1	-	4613	22	ISM	ENSMUSG00000007107.7	ENSMUST00000111243.2	3470	23	-852	3	-852	-3	intron_retention	FALSE	canonical	0	0	junction_5	1.36193806153096	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTACTTGGTGTGCAG	NA	False	NA	NA	False	GATAAA	-16	NA	172086833	172051082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172051394_172051663_172051756_172054649_172054752_172054866_172054998_172058698_172058845_172059491_172059616_172059752_172059908_172061519_172061689_172061972_172062124_172062505_172062643_172067267_172067441_172067571_172067762_172071593_172071729_172071904_172072015_172072397_172072600_172074198_172074468_172078452_172078571_172078850_172078986_172081619_172081734_172082423_172082631_172085209_172085270_172085451
ES.19280.1	chr2	-	154	1	Intergenic	novelGene_15992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	72857100	72856946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72856900_72857100
ES.19281.1	chr2	-	223	1	Intergenic	novelGene_15993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCGCTTAGCTTAGCTA	7594	False	NA	NA	False	NA	NA	NA	72879019	72878796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_72878800_72879000
ES.19282.1	chr2	+	156	1	Intergenic	novelGene_15994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTAAGA	NA	False	NA	NA	False	NA	NA	NA	72881405	72881561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_72881400_72881600
ES.19283.1	chr2	+	1994	1	FSM	ENSMUSG00000082455.4	ENSMUST00000120830.2	528	1	-1407	-59	-1407	59	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTCAAGTGTGTTGGAC	NA	False	NA	NA	False	AATAAA	-43	NA	72945684	72947678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_72945700_72947700
ES.19284.1	chr2	-	2572	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	114307	-1361	112820	1361	3prime_fragment	FALSE	canonical	3	385	junction_2	32.190405748021	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCCAGCATCATGCTG	7584	False	NA	NA	False	AATAAA	-17	NA	72930484	72921783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417
ES.19284.10	chr2	-	5227	7	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	34	44726	-1	0	5prime_fragment	FALSE	canonical	3	405	junction_5	21.5464614264152	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044757	72967870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19284.2	chr2	-	2190	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	-17	2	-17	-2	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATTTCGTTTCTAAGGG	NA	False	NA	-15	True	ATTAAA	-12	NA	73044808	72923146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19284.3	chr2	-	1750	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	27	398	6	1	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGTTTGGGGAT	NA	False	NA	-2	True	AATAAA	-17	NA	73044764	72923542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19284.5	chr2	-	3759	10	NIC	ENSMUSG00000027108.16	novel	2175	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	336	junction_3	35.9787317147571	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	NA	False	NA	-5	True	AATAAA	-14	NA	73044752	72923545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_72924069_72927488_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19284.8	chr2	-	1332	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	35	808	0	-407	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCGACGTACAACTTCT	NA	False	NA	-9	True	AATAAA	-14	NA	73044756	72923952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19284.9	chr2	-	1022	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	-117	0	-3	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044794	72967870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ES.19285.1	chr2	+	620	1	Intergenic	novelGene_15995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGAAAAGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	73044855	73045475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73044900_73045500
ES.19286.1	chr2	-	156	1	Intergenic	novelGene_15996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73087471	73087315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73087300_73087500
ES.19287.1	chr2	-	177	1	Intergenic	novelGene_15997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTCC	NA	False	NA	NA	False	NA	NA	NA	73091962	73091785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73091800_73092000
ES.19288.1	chr2	+	2803	2	FSM	ENSMUSG00000068859.6	ENSMUST00000090813.6	4514	2	11	1700	11	-1700	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGTTGTATTACTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	73102279	73106115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_73102436_73103468
ES.19289.1	chr2	-	1905	1	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	27688	4	27554	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTTGCCTATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	73115357	73113452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73113500_73115400
ES.19289.10	chr2	-	5951	6	NIC	ENSMUSG00000041777.13	novel	1113	9	NA	NA	28	836	intron_retention	FALSE	canonical	3	42	junction_4	19.2	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAGTTTGCAGATATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	73142883	73114524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73140896_73142760
ES.19289.11	chr2	-	1615	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	-17	834	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAAGTTTGCAGATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	73142928	73114526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ES.19289.13	chr2	-	774	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	12	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGATAAGAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	73142899	73115338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ES.19289.2	chr2	-	1926	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	14	-736	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTATAATTGGATGTC	NA	False	NA	NA	False	AATAAA	-44	NA	73142897	73114184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ES.19289.4	chr2	-	2242	8	NIC	ENSMUSG00000041777.13	novel	1113	9	NA	NA	28	-744	intron_retention	FALSE	canonical	0	0	junction_5	31.2729915422238	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATGATATTTATAAT	NA	False	NA	NA	False	AATAAA	-36	NA	73142883	73114192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136686_73137198_73137273_73140800_73140896_73142760
ES.19289.5	chr2	-	2991	4	NNC	ENSMUSG00000041777.13	novel	1113	9	NA	NA	23180	-766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.9254063985795	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTCCTTAAGACT	NA	False	NA	NA	False	AATAAA	-14	NA	73119731	73114214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73115380_73116681_73116768_73117952_73118467_73118505
ES.19289.6	chr2	-	5433	8	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	4	-767	intron_retention	FALSE	canonical	0	0	junction_6	31.5070448876282	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATGTCCTTAAGAC	NA	False	NA	NA	False	AATAAA	-13	NA	73142907	73114215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73140896_73142760
ES.19289.7	chr2	-	2732	7	NIC	ENSMUSG00000041777.13	novel	1113	9	NA	NA	28	-767	intron_retention	FALSE	canonical	3	42	junction_4	17.8737858950537	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATGTCCTTAAGAC	NA	False	NA	NA	False	AATAAA	-13	NA	73142883	73114215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73137273_73140800_73140896_73142760
ES.19289.8	chr2	-	1795	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	12	-869	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTATCAATTCAAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	73142899	73114317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ES.19289.9	chr2	-	2625	7	NIC	ENSMUSG00000041777.13	novel	1113	9	NA	NA	28	-874	intron_retention	FALSE	canonical	3	42	junction_4	17.8737858950537	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAATAATTATCAATTC	NA	False	NA	NA	False	ATTAAA	-13	NA	73142883	73114322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73137273_73140800_73140896_73142760
ES.1929.1	chr1	+	6990	1	NIC	ENSMUSG00000038034.16	novel	2650	2	NA	NA	24086	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCAGCAATCTGCCTGT	NA	False	NA	NA	False	AATATA	-10	NA	172113293	172120283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172113300_172120300
ES.1929.10	chr1	+	2326	7	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.853528560163	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3727	False	NA	11	True	AATAAA	-11	NA	172139917	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140201_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.11	chr1	+	3600	3	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	751	junction_1	35	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3728	False	NA	11	True	AATAAA	-11	NA	172139918	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172146535_172146859
ES.1929.12	chr1	+	2553	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	675	junction_3	53.4602656184946	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3729	False	NA	11	True	AATAAA	-11	NA	172139919	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146535_172146859
ES.1929.13	chr1	+	3268	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-8	2	intron_retention	FALSE	canonical	3	675	junction_2	52.8464757576132	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	3735	False	NA	15	True	AATAAA	-15	NA	172139925	172147404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172145384_172145603_172146012_172146120_172146535_172146859
ES.1929.14	chr1	+	1434	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	332.38334419763	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3739	False	NA	11	True	AATAAA	-11	NA	172139929	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.16	chr1	+	2587	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	10	-4	intron_retention	FALSE	canonical	3	717	junction_2	38.2981722801494	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATCGAGGCCTGTTGT	3753	False	NA	9	True	AATAAA	-9	NA	172139943	172147398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172144096_172144921_172146535_172146859_172146991_172147150
ES.1929.17	chr1	+	1696	6	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.120242569541	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3753	False	NA	11	True	AATAAA	-11	NA	172139943	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140014_172144960_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.18	chr1	+	1798	6	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	303.781500424236	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3753	False	NA	11	True	AATAAA	-11	NA	172139943	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172144096_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.19	chr1	+	3085	6	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	11	-2	intron_retention	FALSE	canonical	3	675	junction_2	47.2779018146956	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3754	False	NA	11	True	AATAAA	-11	NA	172139944	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.2	chr1	+	2828	9	NNC	ENSMUSG00000038034.16	novel	893	4	NA	NA	-21824	-1	intron_retention	FALSE	canonical	0	0	junction_1	376.146912788075	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGTTGTGTCTTCTCT	NA	False	NA	18	True	AATAAA	-18	NA	172117513	172147407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172117714_172117804_172118295_172118522_172118613_172143717_172144096_172144921_172145382_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.20	chr1	+	2368	6	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	11	-2	intron_retention	FALSE	canonical	3	675	junction_3	47.8430768241341	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3754	False	NA	11	True	AATAAA	-11	NA	172139944	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146535_172146859_172146991_172147150
ES.1929.22	chr1	+	1655	5	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	21	-2	intron_retention	FALSE	canonical	0	0	junction_2	333.172158950894	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3764	False	NA	11	True	AATAAA	-11	NA	172139954	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140161_172143717_172143804_172145603_172146012_172146120_172146535_172146859
ES.1929.23	chr1	+	2265	7	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	277.117554277763	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3771	False	NA	11	True	AATAAA	-11	NA	172139961	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140161_172143694_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.24	chr1	+	1888	7	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	280.242999714335	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCGAGGCCTGTTGTG	3771	False	NA	10	True	AATAAA	-10	NA	172139961	172147399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140161_172143717_172143743_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.25	chr1	+	7008	3	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	29	2	intron_retention	FALSE	canonical	3	723	junction_1	49	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	3772	False	NA	15	True	AATAAA	-15	NA	172139962	172147404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172146012_172146120_172146535_172146859
ES.1929.26	chr1	+	3343	4	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	29	-1	intron_retention	FALSE	canonical	3	675	junction_2	59.6210253741637	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGTTGTGTCTTCTCT	3772	False	NA	18	True	AATAAA	-18	NA	172139962	172147407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172145384_172145603_172146535_172146859
ES.1929.27	chr1	+	3256	5	NNC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	32	1	intron_retention	FALSE	canonical	2	2	junction_1	323.723937174871	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTCTTCTCTTG	3775	False	NA	20	True	AATAAA	-20	NA	172139965	172147409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172140161_172143694_172145384_172145603_172146012_172146120_172146535_172146859
ES.1929.28	chr1	+	4127	3	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	2795	-2	intron_retention	FALSE	canonical	3	675	junction_1	73	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	6538	False	NA	11	True	AATAAA	-11	NA	172142728	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172145384_172145603_172146535_172146859
ES.1929.29	chr1	+	4351	2	FSM	ENSMUSG00000038034.16	ENSMUST00000150598.2	448	2	-3618	-285	2796	3	multi-exon	FALSE	canonical	3	821	junction_1	0	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGCCTGTTGTGTCTTCT	6539	False	NA	16	True	AATAAA	-16	NA	172142729	172147405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172146535_172146859
ES.1929.4	chr1	+	2323	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-43	-2	-43	2	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTGTGTCTTCTCTTGC	3700	False	NA	21	True	AATAAA	-21	NA	172139890	172147410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.5	chr1	+	3460	4	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-31	2	intron_retention	FALSE	canonical	3	745	junction_3	34.4995974211616	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	3712	False	NA	15	True	AATAAA	-15	NA	172139902	172147404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172146535_172146859_172146991_172147150
ES.1929.6	chr1	+	3342	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	723	junction_2	36.7287353444139	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3717	False	NA	11	True	AATAAA	-11	NA	172139907	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172140161_172143717_172146012_172146120_172146535_172146859_172146991_172147150
ES.1929.7	chr1	+	2457	6	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	-20	1	-20	-1	intron_retention	FALSE	canonical	3	675	junction_3	48.3553513067582	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGTTGTGTCTTCTCT	3723	False	NA	18	True	AATAAA	-18	NA	172139913	172147407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859
ES.1929.8	chr1	+	5960	5	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-20	2	intron_retention	FALSE	canonical	3	675	junction_2	53.2423703454307	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGAGGCCTGTTGTGTCTTC	3723	False	NA	15	True	AATAAA	-15	NA	172139913	172147404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172144096_172144921_172145384_172145603_172146535_172146859_172146991_172147150
ES.1929.9	chr1	+	6999	3	NIC	ENSMUSG00000038034.16	novel	2278	7	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	745	junction_2	38	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	3726	False	NA	11	True	AATAAA	-11	NA	172139916	172147400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172146535_172146859_172146991_172147150
ES.19290.1	chr2	+	3275	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	33	1	-20	-1	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATTTGATCTTTGATAA	NA	False	NA	NA	False	AATAAA	-29	NA	73142977	73168161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ES.19290.10	chr2	+	1577	10	NNC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	2	-434	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.1609307744884	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTTCTTAATGGT	NA	False	NA	NA	False	ATTAAA	-12	NA	73143004	73166209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73144303_73144406_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73153499_73153679_73160106_73160270_73161326_73161502_73166054
ES.19290.11	chr2	+	3421	9	NNC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	39.1846589879254	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTGATCTT	NA	False	NA	NA	False	AATAAA	-23	NA	73143004	73168155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73153499_73153679_73160106_73160270_73161326_73161502_73166054
ES.19290.12	chr2	+	1944	5	NNC	ENSMUSG00000008226.15	novel	1897	4	NA	NA	-8	-41	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.8364220968831	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATATATAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	73143011	73151099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73144303_73144406_73145775_73145937_73148589_73148772_73149646
ES.19290.13	chr2	+	1287	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	69	1953	-6	-434	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTTCTTAATGGT	NA	False	NA	NA	False	ATTAAA	-12	NA	73143013	73166209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ES.19290.14	chr2	+	2877	6	NIC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	41.3975844705944	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATTTGATCTTTGATAA	NA	False	NA	NA	False	AATAAA	-29	NA	73143037	73168161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73166054
ES.19290.15	chr2	+	4280	8	NNC	ENSMUSG00000008226.15	novel	1239	5	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3541845804275	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	AATAAA	-30	NA	73143078	73168162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73144163_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ES.19290.16	chr2	+	4365	9	NNC	ENSMUSG00000008226.15	novel	1239	5	NA	NA	72	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.7886805141434	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	73143091	73168158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73144163_73144303_73144406_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ES.19290.17	chr2	+	4535	3	ISM	ENSMUSG00000008226.15	ENSMUST00000123621.2	1239	5	8270	-1515	8270	-4	3prime_fragment	FALSE	canonical	3	50	junction_1	2.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCATTTGATCTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	73158013	73168158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_73160270_73161326_73161502_73166054
ES.19290.18	chr2	+	184	1	Intergenic	novelGene_15998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGTTGATAACTTTT	NA	False	NA	NA	False	NA	NA	NA	73164924	73165108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73164900_73165100
ES.19290.2	chr2	+	3485	5	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	37	12965	-16	2831	5prime_fragment	FALSE	canonical	3	52	junction_4	23.0475052879916	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGTTGTGTACACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	73142981	73155197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328
ES.19290.3	chr2	+	1094	5	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	45	15348	-8	448	5prime_fragment	FALSE	canonical	3	52	junction_4	23.0475052879916	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTTGTTTGTTTGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	73142989	73152814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328
ES.19290.4	chr2	+	1115	3	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	-7	1664	-7	-1664	5prime_fragment	FALSE	canonical	3	91	junction_1	10.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73142990	73149476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_73143058_73145775_73145937_73148589
ES.19290.5	chr2	+	2494	1	NIC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	-7	-661	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTTACTGCCATGTT	NA	False	NA	NA	False	NA	NA	NA	73142990	73145484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_73143000_73145500
ES.19290.6	chr2	+	3231	8	NNC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	34.6139054280154	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGATTCATTTGATC	NA	False	NA	NA	False	AATAAA	-21	NA	73142990	73168153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152351_73152539_73160106_73160270_73161326_73161502_73166054
ES.19290.7	chr2	+	1847	4	NNC	ENSMUSG00000008226.15	novel	1897	4	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	45.3308822866806	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTGGTTGTATCAAT	NA	False	NA	NA	False	AATAAA	-41	NA	73142999	73151145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73145775_73145937_73148642_73148772_73149646
ES.19290.8	chr2	+	4090	10	NNC	ENSMUSG00000008226.15	novel	3309	8	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.9602986961088	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTCATTTGATCTT	NA	False	NA	NA	False	AATAAA	-23	NA	73143000	73168155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73153083_73153291_73153413_73153499_73153679_73160106_73160270_73161326_73161502_73166054
ES.19290.9	chr2	+	1894	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	7	-4	2	4	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTTTGGTTGTATCAA	NA	False	NA	NA	False	AATAAA	-40	NA	73143004	73151144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
ES.19291.1	chr2	-	4893	17	FSM	ENSMUSG00000041762.17	ENSMUST00000076463.12	5061	17	167	1	6	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.09165006633519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGACAGCTTTTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	73216749	73171850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73174102_73178480_73178619_73179970_73180036_73182192_73182289_73183960_73184098_73186941_73187047_73192768_73192980_73194275_73194367_73194511_73194597_73197824_73197943_73198657_73198742_73200329_73200486_73201308_73201475_73203958_73204359_73212167_73212653_73213138_73213303_73216608
ES.19291.2	chr2	-	4887	17	NNC	ENSMUSG00000041762.17	novel	5061	17	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2.17136909575503	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTGACAGCTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	73216782	73171852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73174102_73178480_73178619_73179970_73180036_73182192_73182289_73183960_73184098_73186941_73187047_73192768_73192980_73194275_73194367_73194511_73194597_73197824_73197943_73198657_73198742_73200329_73200486_73201308_73201475_73203958_73204359_73212167_73212653_73213175_73213303_73216608
ES.19292.1	chr2	+	2112	8	Intergenic	novelGene_15999	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATCCGGGAACTTCGCC	NA	False	NA	NA	False	NA	NA	NA	73262290	73359798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73262808_73264371_73264490_73265291_73265502_73267296_73268036_73270320_73270501_73274788_73274918_73278191_73278284_73359671
ES.19292.2	chr2	+	175	1	Intergenic	novelGene_16000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAACTCATGTAG	NA	False	NA	NA	False	NA	NA	NA	73336108	73336283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73336100_73336300
ES.19292.3	chr2	+	176	1	Intergenic	novelGene_16001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	73351338	73351514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73351300_73351500
ES.19293.1	chr2	-	4900	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	-170	-2	-170	2	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTTTCTTGTCTGT	NA	False	NA	2	True	AATAAA	-23	NA	73360248	73259951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.10	chr2	-	4024	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	284	420	29	9	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGTGTCTATTTCAC	NA	False	NA	NA	False	ATTAAA	-6	NA	73359794	73260373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.11	chr2	-	4022	8	FSM	ENSMUSG00000075284.11	ENSMUST00000102680.8	4032	8	18	-8	18	8	multi-exon	FALSE	canonical	1	2	junction_7	18.1647786574312	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTGTGTCTATTTCA	NA	False	NA	NA	False	ATTAAA	-5	NA	73316089	73260374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73315966
ES.19293.12	chr2	-	3967	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	20	6	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTCTGTGTCTATTT	NA	False	NA	NA	False	ATTAAA	-3	NA	73316793	73260376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.13	chr2	-	3481	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-65	-565	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATTTTTTTATTCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	73316878	73260947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.14	chr2	-	3445	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	288	995	33	-566	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACAATTTTTTTATTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	73359790	73260948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.15	chr2	-	3339	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	266	1123	11	-694	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTATTTTTATAACT	NA	False	NA	NA	False	AATAAA	-22	NA	73359812	73261076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.16	chr2	-	3666	8	FSM	ENSMUSG00000075284.11	ENSMUST00000094681.11	4728	8	-169	1231	-169	-802	multi-exon	FALSE	canonical	3	33	junction_5	8.44671171376828	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACATTCCTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	73360247	73261184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.17	chr2	-	3214	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-35	-802	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACATTCCTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	73316848	73261184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.18	chr2	-	3229	9	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-15	-802	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	21.8685704836873	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACATTCCTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	73359741	73261184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73341286_73341356_73359670
ES.19293.19	chr2	-	5402	7	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	62	-802	intron_retention	FALSE	canonical	2	7	junction_6	17.8737858950537	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGACATTCCTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	73316751	73261184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.2	chr2	-	4493	8	FSM	ENSMUSG00000075284.11	ENSMUST00000102680.8	4032	8	-32	-429	-32	0	multi-exon	FALSE	canonical	1	2	junction_7	18.1647786574312	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73316139	73259953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73315966
ES.19293.20	chr2	-	3481	9	NNC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	40	-830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.4722050542442	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAATCAATCCA	NA	False	NA	NA	False	NA	NA	NA	73360038	73261212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73331589_73331642_73359670
ES.19293.22	chr2	-	3173	8	NNC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-560	-830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.805123053605	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAATCAATCCA	NA	False	NA	NA	False	NA	NA	NA	73360638	73261212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73360526
ES.19293.3	chr2	-	4501	8	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	16.5849698368672	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73316904	73259953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.4	chr2	-	4979	8	NNC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.3268850473676	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73316817	73259953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73269755_73270501_73274788_73274919_73278192_73278282_73316723
ES.19293.5	chr2	-	4479	9	NIC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	21.8685704836873	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73359760	73259953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73341286_73341356_73359670
ES.19293.6	chr2	-	4510	9	NNC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.2261107708929	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTGGCTTTCTTGTCT	NA	False	NA	0	True	AATAAA	-21	NA	73359779	73259953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73269755_73269837_73270320_73270501_73274788_73274919_73278192_73278282_73359670
ES.19293.8	chr2	-	4497	9	NNC	ENSMUSG00000075284.11	novel	4728	8	NA	NA	-20	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	22.4722050542442	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGACTTGTGGCTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	73359746	73259958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73319404_73319511_73359670
ES.19294.1	chr2	+	379	2	Antisense	novelGene_ENSMUSG00000027107.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCCCCCAATTTC	NA	False	NA	NA	False	GATAAA	-19	NA	73391304	73395718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_73391509_73395543
ES.19294.2	chr2	+	1920	2	Antisense	novelGene_ENSMUSG00000027107.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCCCCCAATTTC	NA	False	NA	NA	False	GATAAA	-19	NA	73393612	73395718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_73394670_73394855
ES.19295.1	chr2	+	3399	3	NNC	ENSMUSG00000086544.2	novel	538	2	NA	NA	-66	1433	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATTGAGGGGTTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	73427101	73430977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_73427144_73427220_73429854_73430253
ES.19296.1	chr2	+	3064	1	Intergenic	novelGene_16003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGCAAAGGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	73465146	73468210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73465100_73468200
ES.19297.1	chr2	-	4074	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-25	1	-25	-1	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTTGAGCTGCCTACT	NA	False	NA	43	True	NA	NA	NA	73605715	73441004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.10	chr2	-	2177	13	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-9	-5	intron_retention	FALSE	canonical	1	6	junction_7	86.8150572577515	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605699	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73510159_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.11	chr2	-	2469	14	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-22	-5	intron_retention	FALSE	canonical	1	1	junction_8	104.660623702738	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605712	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73508103_73508182_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.13	chr2	-	2543	14	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_12	104.597000647144	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605699	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73592406_73592572_73605366
ES.19297.14	chr2	-	2106	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-26	-5	intron_retention	FALSE	canonical	1	28	junction_7	85.6295114031401	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605716	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.16	chr2	-	2625	16	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-34	-5	intron_retention	TRUE	canonical	0	0	junction_9	127.009815893628	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605445	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73537453_73537537_73537630_73537884_73540798_73540831_73546707_73546764_73551746_73551786_73592406_73592572_73605366
ES.19297.19	chr2	-	2458	13	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-25	-7	intron_retention	FALSE	canonical	2	64	junction_1	63.0706724414939	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAACACTAATAGCTTT	NA	False	NA	52	True	ATTAAA	-16	NA	73605715	73442686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73444939_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.20	chr2	-	2397	13	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-25	-7	intron_retention	FALSE	canonical	0	0	junction_1	79.3089510851217	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAACACTAATAGCTTT	NA	False	NA	52	True	ATTAAA	-16	NA	73605715	73442686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443539_73444998_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.23	chr2	-	2280	13	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-20	-99	intron_retention	FALSE	canonical	0	0	junction_4	105.483904775405	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTTCTGTTAAATTAT	NA	False	NA	-40	True	AATAAA	-13	NA	73605710	73442778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454522_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540827_73546703_73546764_73551746_73551786_73605366
ES.19297.24	chr2	-	2174	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	99	1777	79	-101	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATTTTCTGTTAAATT	NA	False	NA	-42	True	AATAAA	-11	NA	73605591	73442780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.25	chr2	-	2080	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-22	1992	-22	236	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGGGTCCATGCCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	73605712	73442995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.26	chr2	-	2003	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-25	234	combination_of_known_splicesites	FALSE	canonical	1	16	junction_6	88.3547507691073	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGGGGTCCATGCCA	NA	False	NA	NA	False	AGTAAA	-13	NA	73605715	73442997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.28	chr2	-	1561	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-15	13	combination_of_known_junctions	FALSE	canonical	1	28	junction_7	85.6295114031401	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCTCAGCTGTCCTTGTA	NA	False	NA	0	True	ATTAAA	-30	NA	73605705	73443218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.29	chr2	-	1857	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-25	2218	-25	10	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGCTCAGCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-27	NA	73605715	73443221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.3	chr2	-	3905	14	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-16	38	intron_retention	FALSE	canonical	0	0	junction_10	116.201162038818	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTCCTCTGGTCCTT	NA	False	NA	-3	True	NA	NA	NA	73605427	73441050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540827_73546703_73546764_73551746_73551786_73592406_73592572_73605366
ES.19297.30	chr2	-	1420	10	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-23	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	98.7409630182822	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGCTCAGCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-27	NA	73605713	73443221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73546707_73546764_73551746_73551786_73605366
ES.19297.31	chr2	-	1478	11	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	1	15	junction_6	92.9061892448506	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATAGCACCGCTCAG	NA	False	NA	-11	True	ATTAAA	-19	NA	73605711	73443229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.32	chr2	-	3156	6	ISM	ENSMUSG00000056486.19	ENSMUST00000229987.2	1431	10	58662	5556	4	-4352	internal_fragment	FALSE	canonical	3	203	junction_2	31.45536520214	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGGTTGACCCCCAAAG	NA	False	NA	NA	False	NA	NA	NA	73546749	73459573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707
ES.19297.33	chr2	-	146	1	Intergenic	novelGene_16002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATAAATTATT	2564	False	NA	NA	False	NA	NA	NA	73461355	73461209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73461200_73461400
ES.19297.34	chr2	-	204	1	Intergenic	novelGene_16004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTATTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73561882	73561678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73561700_73561900
ES.19297.4	chr2	-	3892	12	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	78	37	intron_retention	FALSE	canonical	2	16	junction_6	94.3116865233362	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATGTTCCTCTGGTCCT	NA	False	NA	-4	True	NA	NA	NA	73605592	73441051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73443541_73444939_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.5	chr2	-	2594	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	283	1173	4	503	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGTTTCCAGTAATAA	NA	False	NA	NA	False	NA	NA	NA	73605407	73442176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.6	chr2	-	2457	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	-83	1676	-83	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605773	73442679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19297.9	chr2	-	2317	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	-26	-5	intron_retention	FALSE	canonical	1	16	junction_6	88.3547507691073	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTAATAGCTTTTT	NA	False	NA	54	True	ATTAAA	-18	NA	73605716	73442684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ES.19298.1	chr2	-	176	1	Intergenic	novelGene_16005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAAGACTT	227	False	NA	NA	False	NA	NA	NA	73625510	73625334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73625300_73625500
ES.19299.1	chr2	+	1797	2	Intergenic	novelGene_16006	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73628706	73631023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73630268_73630787
ES.19299.2	chr2	+	407	1	Intergenic	novelGene_16007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAACAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	73630646	73631053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73630600_73631100
ES.193.1	chr1	+	171	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGCTACACT	NA	False	NA	NA	False	NA	NA	NA	24156380	24156551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_24156400_24156600
ES.1930.1	chr1	-	6228	23	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.5273587039126	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGGCCTGGGTTCTTG	NA	False	NA	0	True	AATAAA	-28	NA	172125642	172099275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113346_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.11	chr1	-	5027	22	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	4388	1016	4388	-1016	3prime_fragment	FALSE	canonical	3	93	junction_19	22.8792551771319	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTAGGAGCGGTATAC	NA	False	NA	NA	False	NA	NA	NA	172121243	172100291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138
ES.1930.12	chr1	-	5036	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	28	1163	28	-1163	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTGTGGCCTTCAGT	NA	False	NA	NA	False	CATAAA	-17	NA	172125603	172100438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.13	chr1	-	4925	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	30	1272	30	-1272	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	172125601	172100547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.14	chr1	-	3865	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	70	2292	70	542	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172125561	172101567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.15	chr1	-	4754	18	NIC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	7144	530	intron_retention	FALSE	canonical	3	101	junction_14	20.4472483576134	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172118487	172101579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177
ES.1930.16	chr1	-	3089	17	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	9098	510	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	40.1924569260203	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172116533	172101599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116427
ES.1930.17	chr1	-	6375	19	NIC	ENSMUSG00000007097.15	novel	3583	22	NA	NA	40	467	intron_retention	FALSE	canonical	3	93	junction_15	22.5219371795809	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	172125591	172101642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172103577_172103687_172103790_172105823_172105955_172106101_172106562_172106879_172107035_172107234_172107404_172107502_172108273_172112066_172112243_172112335_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.18	chr1	-	3519	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	-66	2774	-66	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172125697	172102049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.2	chr1	-	6227	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGGCCTGGGTTCTTG	NA	False	NA	0	True	AATAAA	-28	NA	172125631	172099275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.22	chr1	-	4074	22	NIC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	70	56	intron_retention	FALSE	canonical	3	93	junction_18	23.0767230644277	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCCCACTCTGCTACAT	NA	False	NA	-6	True	NA	NA	NA	172125561	172102053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.23	chr1	-	1387	11	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	55	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	50.306659598904	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCCCACTCTGCTACAT	NA	False	NA	-6	True	NA	NA	NA	172125576	172102053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107536_172121180_172121244_172125447
ES.1930.24	chr1	-	3504	24	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	0	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	44.413931975194	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCCCACTCTGCTAC	NA	False	NA	-8	True	NA	NA	NA	172125631	172102055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116602_172116660_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.26	chr1	-	3154	22	NIC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	36	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	36.257769516893	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCCACAGGTCCCGCT	NA	False	NA	-13	True	AATAAA	-19	NA	172125595	172102108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172120893_172120954_172121138_172121244_172125447
ES.1930.27	chr1	-	2560	17	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	9117	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	40.1924569260203	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCACAGGTCCCGC	NA	False	NA	-14	True	AATAAA	-18	NA	172116514	172102109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116427
ES.1930.28	chr1	-	3251	22	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	4371	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.8470548004781	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCCACAGGTCCCGC	NA	False	NA	-14	True	AATAAA	-18	NA	172121260	172102109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103459_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138
ES.1930.29	chr1	-	3428	23	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	36.5490726386293	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCTCCACAGGTCCCG	NA	False	NA	-15	True	AATAAA	-17	NA	172125626	172102110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118136_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.3	chr1	-	6039	22	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	4421	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.8608955884521	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGGGCCTGGGTTCTT	NA	False	NA	-1	True	AATAAA	-27	NA	172121210	172099276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103820_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138
ES.1930.31	chr1	-	3423	22	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	28	3964	28	245	5prime_fragment	FALSE	canonical	3	93	junction_18	22.5534386817594	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCGTTACTGTTATGA	NA	False	NA	NA	False	NA	NA	NA	172125603	172103239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.32	chr1	-	4149	20	FSM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	20	-983	20	983	multi-exon	FALSE	canonical	3	93	junction_16	22.3000192539325	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAAGTATAAATTGGGAG	NA	False	NA	NA	False	AATAAA	-19	NA	172125611	172104666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.33	chr1	-	1133	4	ISM	ENSMUSG00000007097.15	ENSMUST00000137679.3	2190	13	6668	4430	6668	-4430	internal_fragment	FALSE	canonical	3	93	junction_3	15.8954920234218	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCCTAAATGTTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	172118963	172116305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172116986_172117819_172117955_172118177_172118292_172118759
ES.1930.4	chr1	-	3940	10	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	-3562	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.8068587861101	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGGGCCTGGGTTCTT	NA	False	NA	-1	True	AATAAA	-27	NA	172107607	172099276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172101551_172101654_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502
ES.1930.5	chr1	-	5443	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	0	784	0	-784	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCCATGGTTGATTTC	NA	False	NA	3	True	NA	NA	NA	172125631	172100059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.1930.6	chr1	-	3978	4	NIC	ENSMUSG00000007097.15	novel	3583	22	NA	NA	-2297	-797	intron_retention	FALSE	canonical	3	144	junction_2	17.1464281994822	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAGAAACTGCTCC	NA	False	NA	-10	True	NA	NA	NA	172106342	172100072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172103577_172103687_172103790_172105823_172105955_172106101
ES.1930.8	chr1	-	5420	23	NNC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	1	-797	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	36.5490726386293	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAGAAACTGCTCC	NA	False	NA	-10	True	NA	NA	NA	172125630	172100072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118186_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ES.19300.1	chr2	+	3406	2	Antisense	novelGene_ENSMUSG00000027104.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTCTCGAAACATACAT	NA	False	NA	NA	False	NA	NA	NA	73649028	73656486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_73649493_73653544
ES.19300.2	chr2	+	7455	1	Antisense	novelGene_ENSMUSG00000027104.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGTCTCGAAACATAC	NA	False	NA	NA	False	NA	NA	NA	73649029	73656484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_73649000_73656500
ES.19301.1	chr2	+	186	1	Intergenic	novelGene_16008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	73668451	73668637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73668500_73668600
ES.19301.2	chr2	+	182	2	Antisense	novelGene_ENSMUSG00000027104.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATCCATACCTGACAAA	NA	False	NA	NA	False	NA	NA	NA	73668453	73716709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_73668613_73716686
ES.19301.3	chr2	+	202	1	Intergenic	novelGene_16009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCTATATACTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	73674021	73674223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73674000_73674200
ES.19301.4	chr2	+	3959	1	Intergenic	novelGene_16011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTCTGTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	73712590	73716549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73712600_73716500
ES.19302.1	chr2	-	7708	14	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	0	5126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.183353403201	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGATCTTTAGTTT	NA	False	NA	NA	False	AATAAA	-44	NA	73722938	73641726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73642115_73643627_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.10	chr2	-	3832	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTGTTTTTAATCT	NA	False	NA	-1	True	AATAAA	-24	NA	73722971	73646854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.11	chr2	-	3651	10	NNC	ENSMUSG00000027104.19	novel	4016	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.027972008708	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCTTGTTTTTAATC	NA	False	NA	-2	True	AATAAA	-23	NA	73722893	73646855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681322_73693512_73693583_73704013_73704090_73722818
ES.19302.12	chr2	-	4333	15	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-36	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	95.5978236025853	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCTTGTTTTTAATC	NA	False	NA	-2	True	AATAAA	-23	NA	73723019	73646855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.13	chr2	-	4054	13	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	125.941454652549	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	-3	True	AATAAA	-22	NA	73722944	73646856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.14	chr2	-	3959	12	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	113.122182171197	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	-3	True	AATAAA	-22	NA	73722974	73646856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.15	chr2	-	4282	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	108.414454191086	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	-3	True	AATAAA	-22	NA	73722892	73646856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694846_73704013_73704090_73710628_73710726_73722818
ES.19302.16	chr2	-	4246	13	NNC	ENSMUSG00000027104.19	novel	4037	13	NA	NA	292	-4	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_12	100.726113793792	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	False	NA	-3	True	AATAAA	-22	NA	73722582	73646856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722307
ES.19302.18	chr2	-	3987	12	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	104.346292508793	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGCTTGTTTTTAA	NA	False	NA	-4	True	AATAAA	-21	NA	73722941	73646857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.19	chr2	-	3960	12	FSM	ENSMUSG00000027104.19	ENSMUST00000090802.11	4016	12	51	5	-6	-5	multi-exon	FALSE	canonical	3	13	junction_11	103.634928219724	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGCTTGTTTTTAA	NA	False	NA	-4	True	AATAAA	-21	NA	73722905	73646857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73722818
ES.19302.2	chr2	-	6469	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-26	-4047	12	2290	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCTTGTGTGTGTGCT	NA	False	NA	NA	False	AATACA	-25	NA	73722925	73644562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.20	chr2	-	4089	13	NIC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	85.1276818797635	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGCTTGTTTTTAA	NA	False	NA	-4	True	AATAAA	-21	NA	73722946	73646857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.22	chr2	-	4439	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	194	5	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	82.2570656665493	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-20	NA	73722680	73646858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722307
ES.19302.23	chr2	-	4168	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	101.959000363391	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATAATTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-18	NA	73722892	73646860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73700997_73704013_73704090_73710628_73710726_73722818
ES.19302.24	chr2	-	3984	13	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	128.194811604145	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722893	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694846_73704013_73704090_73710628_73710726_73722818
ES.19302.25	chr2	-	4240	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.7349222952447	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73723004	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653642_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.26	chr2	-	3857	12	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	132.648731431602	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722949	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.27	chr2	-	4248	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.063047032003	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722963	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672802_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.28	chr2	-	3906	13	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	116.768645905768	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722892	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.29	chr2	-	4205	15	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	175	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	114.478854655632	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-17	NA	73722699	73646861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722620
ES.19302.3	chr2	-	4364	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-158	-1810	-74	53	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTCAGAGCATTTAATT	NA	False	NA	54	True	NA	NA	NA	73723057	73646799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.31	chr2	-	4244	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	86.518869577101	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722971	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.32	chr2	-	4323	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.982958846489	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722938	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73655602_73655748_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676716_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.33	chr2	-	4229	15	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	116.738850361281	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722893	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.34	chr2	-	8131	4	ISM	ENSMUSG00000027104.19	ENSMUST00000100009.11	3936	11	28311	-5	10526	1	3prime_fragment	FALSE	canonical	3	271	junction_2	34.9221356098901	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73665323	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135
ES.19302.35	chr2	-	4345	16	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	174	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	130.172432650781	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722700	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694846_73700966_73701030_73704013_73704090_73710628_73710726_73722620
ES.19302.37	chr2	-	4097	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	219	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	84.7325063546222	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722655	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722620
ES.19302.38	chr2	-	3737	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	113.08054651442	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722893	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.39	chr2	-	4045	13	NNC	ENSMUSG00000027104.19	novel	4037	13	NA	NA	174	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	102.798616506038	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATAATTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-16	NA	73722700	73646862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722620
ES.19302.4	chr2	-	4238	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-201	0	-98	0	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73723081	73646852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.40	chr2	-	4068	13	NNC	ENSMUSG00000027104.19	novel	4210	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	113.128245809789	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722893	73646863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73704013_73704090_73722818
ES.19302.41	chr2	-	4133	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6177222207575	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722964	73646863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73647124_73647197_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.43	chr2	-	4199	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	108.752668275969	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722891	73646863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694771_73704013_73704090_73710628_73710726_73722818
ES.19302.46	chr2	-	4232	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	109.42017871583	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722893	73646863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73667348_73667445_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.47	chr2	-	4391	16	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	118.765427068094	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722945	73646863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694846_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.48	chr2	-	4219	14	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	121.896891145779	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTATAATTTGCTTG	NA	False	NA	-11	True	AATAAA	-14	NA	73722938	73646864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73704256_73704393_73710628_73710726_73722818
ES.19302.49	chr2	-	4338	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	198	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	141.363604364961	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTATAATTTGCTTG	NA	False	NA	-11	True	AATAAA	-14	NA	73722676	73646864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694846_73700966_73701030_73704013_73704090_73710628_73710726_73722307
ES.19302.5	chr2	-	4290	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112007.8	4195	14	-95	0	-87	0	multi-exon	FALSE	canonical	3	36	junction_11	109.668839867438	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73723070	73646852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.50	chr2	-	4113	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.7349222952447	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTATAATTTGCTTG	NA	False	NA	-11	True	AATAAA	-14	NA	73722891	73646864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653631_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.51	chr2	-	3499	8	NIC	ENSMUSG00000027104.19	novel	4016	12	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	132.692832342603	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTTTATAATTTGCTT	NA	False	NA	-12	True	AATAAA	-13	NA	73722892	73646865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73722818
ES.19302.52	chr2	-	4301	14	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	121.070471922751	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73723019	73646867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73694705_73694846_73704013_73704090_73710628_73710726_73722818
ES.19302.53	chr2	-	3741	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	112.291762832365	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73722893	73646867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73722818
ES.19302.55	chr2	-	4296	16	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	118.765427068094	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73722912	73646867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73694705_73694788_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.56	chr2	-	4112	13	NNC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.2007021406523	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73722941	73646867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693483_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.57	chr2	-	4035	13	NIC	ENSMUSG00000027104.19	novel	4210	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	84.6841763390435	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73722893	73646867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73722818
ES.19302.58	chr2	-	12972	2	ISM	ENSMUSG00000027104.19	ENSMUST00000143714.8	3641	13	62004	-9834	14896	-1	3prime_fragment	FALSE	canonical	3	327	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATGTTTATAATTTG	NA	False	NA	-15	True	AATAAA	-10	NA	73660953	73646868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73659023_73660135
ES.19302.6	chr2	-	4167	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.6657183986963	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTGTTTTTAATCT	NA	False	NA	-1	True	AATAAA	-24	NA	73722893	73646854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681349_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.60	chr2	-	3583	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	2	-157	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACACACAAAAATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	73722892	73647024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.61	chr2	-	3225	11	NIC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	1	-516	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATCTATTACTTTCA	NA	False	NA	NA	False	ATTAAA	-29	NA	73722893	73647383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.62	chr2	-	3393	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	19	531	-6	-516	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATCTATTACTTTCA	NA	False	NA	NA	False	ATTAAA	-29	NA	73722964	73647383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.63	chr2	-	3684	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-63	-1225	-4	-517	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATCTATTACTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	73722962	73647384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.64	chr2	-	3678	15	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	0	-518	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	95.5978236025853	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTATCTATTACTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	73722894	73647385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.65	chr2	-	3592	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-91	536	1	-521	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTGTATCTATTAC	NA	False	NA	NA	False	ATTAAA	-24	NA	73722971	73647388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.66	chr2	-	3901	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	199	-524	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	82.2570656665493	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTACTTTGTATCTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	73722675	73647391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722307
ES.19302.67	chr2	-	3556	13	NIC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	5	-528	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	85.1276818797635	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGATTCTACTTTGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	73722951	73647395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.68	chr2	-	3265	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	-4	-865	-4	865	multi-exon	FALSE	canonical	3	231	junction_5	32.1212569481487	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAGAAAACTTTGTAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	73722903	73647744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.69	chr2	-	2091	14	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	86.518869577101	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTCCCACTTCCATT	NA	False	NA	NA	False	AATAAA	-17	NA	73722893	73648937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693483_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.7	chr2	-	3976	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	-35	2	-35	-2	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTGTTTTTAATCT	NA	False	NA	-1	True	AATAAA	-24	NA	73723018	73646854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.70	chr2	-	2127	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	1	226	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	108.538152795434	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTCTTCCCACTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	73722893	73648939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73684712_73684780_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.71	chr2	-	2054	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-105	2088	-2	225	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCACTCTTCCCACTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	73722985	73648940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.72	chr2	-	2266	15	NNC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	347	224	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_14	113.018871460135	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCACTCTTCCCACTTC	NA	False	NA	NA	False	AATAAA	-13	NA	73722527	73648941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722307
ES.19302.73	chr2	-	2025	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112007.8	4195	14	81	2089	0	224	multi-exon	FALSE	canonical	3	36	junction_11	109.668839867438	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCACTCTTCCCACTTC	NA	False	NA	NA	False	AATAAA	-13	NA	73722894	73648941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.74	chr2	-	3893	6	ISM	ENSMUSG00000027104.19	ENSMUST00000100009.11	3936	11	16920	3623	-865	-1325	internal_fragment	FALSE	canonical	3	231	junction_4	33.8325287260648	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATAAGAGATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	73676714	73650490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540
ES.19302.75	chr2	-	3520	12	ISM	ENSMUSG00000027104.19	ENSMUST00000112017.8	2396	14	6	8087	1	6	5prime_fragment	FALSE	canonical	3	231	junction_3	29.509208536146	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGAAATTATAATTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	73722893	73656696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.76	chr2	-	3414	11	ISM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	-10	9850	4	0	5prime_fragment	FALSE	canonical	3	85	junction_7	71.7418288030073	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTTTGAAATTATA	NA	False	NA	NA	False	AATAAA	-9	NA	73722890	73656702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.77	chr2	-	1374	11	ISM	ENSMUSG00000027104.19	ENSMUST00000143714.8	3641	13	14	15784	-5	2726	5prime_fragment	FALSE	canonical	3	36	junction_8	104.154884667019	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTCTATGCGTTAAAC	NA	False	NA	NA	False	AATAAA	-23	NA	73722943	73672486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ES.19302.78	chr2	-	6710	7	NNC	ENSMUSG00000027104.19	novel	1604	9	NA	NA	8	270	intron_retention	FALSE	canonical	0	0	junction_6	114.384828053763	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGCTGTGTGGTTAAG	NA	False	NA	NA	False	NA	NA	NA	73722948	73674942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710724_73722814
ES.19302.79	chr2	-	471	5	NNC	ENSMUSG00000027104.19	novel	660	5	NA	NA	2	2241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.440623564297	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTAGAGTATGATTTT	NA	False	NA	NA	False	AGTAAA	-28	NA	73722892	73690978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73691133_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ES.19302.8	chr2	-	4158	12	NNC	ENSMUSG00000027104.19	novel	3943	12	NA	NA	185	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_11	108.75432925742	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTGTTTTTAATCT	NA	False	NA	-1	True	AATAAA	-24	NA	73722689	73646854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722307
ES.19302.80	chr2	-	4339	4	NNC	ENSMUSG00000027104.19	novel	645	3	NA	NA	1	3926	intron_retention	TRUE	non_canonical	0	0	junction_1	153.533926761047	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAAGTAAATAAAAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	73722893	73699691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73700064_73700294_73704090_73710628_73710726_73722818
ES.19302.81	chr2	-	156	1	Intergenic	novelGene_16010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	73711926	73711770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73711800_73711900
ES.19303.1	chr2	+	182	1	Intergenic	novelGene_16012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCAATAGAATCACTT	NA	False	NA	NA	False	NA	NA	NA	73723944	73724126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73723900_73724100
ES.19304.1	chr2	+	212	1	Intergenic	novelGene_16013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACTCTTATCTATCAT	NA	False	NA	NA	False	NA	NA	NA	73727484	73727696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73727500_73727700
ES.19305.1	chr2	-	175	1	Intergenic	novelGene_16014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAATTAATGA	NA	False	NA	NA	False	NA	NA	NA	73732803	73732628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73732600_73732800
ES.19306.1	chr2	-	4552	3	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	16	2224	intron_retention	FALSE	non_canonical	0	0	junction_1	440	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	73741610	73736566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73736670_73736980_73741405_73741585
ES.19306.11	chr2	-	1646	3	FSM	ENSMUSG00000018770.10	ENSMUST00000155474.2	770	3	-7	-869	-7	-2	multi-exon	FALSE	canonical	3	2058	junction_2	1124.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741642	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73740286_73741298_73741405_73741595
ES.19306.12	chr2	-	683	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	49	junction_4	1854.07369055278	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741643	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741403_73741595
ES.19306.13	chr2	-	817	5	NNC	ENSMUSG00000018770.10	novel	714	5	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	1804.16760585041	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741692	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73739052_73739527_73739722_73740207_73740369_73741298_73741405_73741595
ES.19306.14	chr2	-	2661	2	NIC	ENSMUSG00000018770.10	novel	770	3	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	2058	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741644	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73741405_73741595
ES.19306.16	chr2	-	1853	2	ISM	ENSMUSG00000018770.10	ENSMUST00000155474.2	770	3	-23	-869	11	-2	intron_retention	FALSE	canonical	3	4307	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741658	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_73740286_73741298
ES.19306.2	chr2	-	3596	4	NNC	ENSMUSG00000018770.10	novel	862	4	NA	NA	-7	2184	intron_retention	FALSE	non_canonical	0	0	junction_1	1758.90161432892	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	73741642	73736606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73736711_73736946_73740286_73741298_73741405_73741595
ES.19306.3	chr2	-	1188	3	Intergenic	novelGene_16015	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	73738497	73736606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73736708_73736941_73737889_73738357
ES.19306.4	chr2	-	1839	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	-1127	2	-1127	-2	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73742797	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ES.19306.5	chr2	-	763	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	-42	2	-41	-2	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741711	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
ES.19306.7	chr2	-	710	5	NNC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1873.50011676007	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741640	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741423_73741585
ES.19306.9	chr2	-	2852	1	NIC	ENSMUSG00000018770.10	novel	723	5	NA	NA	-9	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGCTGTGATTTGTA	NA	False	NA	-23	True	ATTAAA	-13	NA	73741644	73738792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_73738800_73741600
ES.19307.1	chr2	-	159	1	Intergenic	novelGene_16016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	73744844	73744685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_73744700_73744800
ES.19308.1	chr2	+	1970	1	Intergenic	novelGene_16017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	73864211	73866181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73864200_73866200
ES.19309.1	chr2	+	3169	1	Intergenic	novelGene_16018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGCAAGTGTTTTTATT	NA	False	NA	NA	False	ATTAAA	-29	NA	73908764	73911933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_73908800_73911900
ES.1931.1	chr1	-	2777	1	NIC	ENSMUSG00000038026.13	novel	3857	4	NA	NA	4831	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGACTGGATGCTGCTCA	NA	False	NA	NA	False	AATAAA	-23	NA	172150844	172148067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_172148100_172150800
ES.1931.2	chr1	-	2870	2	ISM	ENSMUSG00000038026.13	ENSMUST00000062387.8	3857	4	3432	5	2222	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGACTGGATGCT	NA	False	NA	NA	False	AATAAA	-18	NA	172153453	172148072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172150762_172153272
ES.19310.1	chr2	+	3356	1	Intergenic	novelGene_16022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	74371560	74374916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_74371600_74374900
ES.19311.1	chr2	+	2994	1	Intergenic	novelGene_16023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAAGCACACTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	74404956	74407950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_74405000_74408000
ES.19312.1	chr2	-	8910	13	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-7	5466	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	69.9761864255739	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTATGGGTTCTTGC	NA	False	NA	2	True	AATAAA	-32	NA	74409231	74345168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.10	chr2	-	2596	2	Intergenic	novelGene_16021	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATTTTGATTGAATAT	NA	False	NA	-15	True	AATAAA	-15	NA	74347957	74345185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_74345852_74346027
ES.19312.11	chr2	-	8330	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-1	5447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.3495994029	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTATTTTGATTGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	74409239	74345187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74345890_74346191_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.12	chr2	-	6542	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	3	-3350	3	3307	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTCAGCTTATTTAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	74409289	74347327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.13	chr2	-	6338	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	28	-3171	-4	3128	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATTTCAAGTTTATTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	74409264	74347506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.14	chr2	-	5715	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	28	-2548	-4	2505	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGTTGGAAATGTT	NA	False	NA	NA	False	AATAAA	-35	NA	74409264	74348129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.15	chr2	-	5309	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	22	-2010	5	2010	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTCTGAGCTGAACTG	NA	False	NA	NA	False	NA	NA	NA	74409270	74348624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.16	chr2	-	3264	13	NIC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	107.368621269593	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTCCAACATGTCT	NA	False	NA	34	True	NA	NA	NA	74409289	74350629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.17	chr2	-	3517	13	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	69.9761864255739	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTGTCCAACATG	NA	False	NA	31	True	AAAAAG	-45	NA	74409302	74350632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.18	chr2	-	3259	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	-19	-45	-19	2	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTGTCCAACATG	NA	False	NA	31	True	AAAAAG	-45	NA	74409311	74350632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.19	chr2	-	3335	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	-14	0	-14	0	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTCTGTGTCCAACA	NA	False	NA	29	True	AAAAAG	-43	NA	74409306	74350634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.2	chr2	-	7479	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-2	5455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3495994029	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTGAATATTGTGTA	NA	False	NA	-9	True	AATAAA	-21	NA	74409277	74345179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74345881_74347079_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.20	chr2	-	3248	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	96.7151616097864	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATTTTTATTTTAT	NA	False	NA	-12	True	ATTAAA	-45	NA	74409289	74350675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74364958_74365013_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.21	chr2	-	3530	14	NIC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	98.2640447224065	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	-14	True	ATTAAA	-43	NA	74409277	74350677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.23	chr2	-	2974	12	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	81.7960576147916	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409264	74350682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74401278_74401321_74403881_74403971_74409162
ES.19312.24	chr2	-	3241	13	NNC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	76.7768682612152	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409288	74350682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378126_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.25	chr2	-	2925	11	NIC	ENSMUSG00000009207.16	novel	2120	12	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	85.6560564116747	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409274	74350682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74401278_74401321_74403881_74403971_74409162
ES.19312.26	chr2	-	3161	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-47	-994	-30	2	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTGTTTATTTTT	NA	False	NA	-19	True	ATTAAA	-38	NA	74409322	74350682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.28	chr2	-	2986	12	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	9152	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	118.455557101659	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTTTTATAAAAAGATG	NA	False	NA	-30	True	ATTAAA	-27	NA	74399415	74350693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74381804_74381847_74385331_74385391_74399284
ES.19312.29	chr2	-	2915	11	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	84.9703477690894	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCTTTTTATAAAAAGA	NA	False	NA	-32	True	ATTAAA	-25	NA	74409260	74350695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74403881_74403971_74409162
ES.19312.3	chr2	-	3531	2	Intergenic	novelGene_16020	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATTGAATATTGTGT	NA	False	NA	-10	True	AATAAA	-20	NA	74349943	74345180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_74345865_74347096
ES.19312.30	chr2	-	3107	13	NNC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	-2	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	77.7086796238933	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAATATAATCTTTTTAT	NA	False	NA	-39	True	ATTAAA	-18	NA	74409277	74350702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401345_74403953_74403971_74409162
ES.19312.31	chr2	-	3450	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-2	-21	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	106.720782623569	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGAATATAATCTTTT	NA	False	NA	-42	True	ATTAAA	-15	NA	74409277	74350705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74381804_74381836_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.32	chr2	-	3270	13	NNC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	56	-21	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	93.3554661257473	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGAATATAATCTTTT	NA	False	NA	-42	True	ATTAAA	-15	NA	74409168	74350705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360106_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.33	chr2	-	3189	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	-18	150	-18	-100	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTGTTCTGAACAGAA	NA	False	NA	-121	True	ATTAAA	-20	NA	74409310	74350784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.35	chr2	-	3074	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	14	107	-3	-100	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTGTTCTGAACAGAA	NA	False	NA	-121	True	ATTAAA	-20	NA	74409278	74350784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.36	chr2	-	3018	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-8	-890	-8	-102	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTTGTTCTGAACAG	NA	False	NA	-123	True	ATTAAA	-18	NA	74409283	74350786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.37	chr2	-	2224	13	NIC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	107.368621269593	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTAGACTTCCTCAC	NA	False	NA	-4	True	AATAAA	-28	NA	74409286	74351666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.38	chr2	-	2105	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	23	-8	8	8	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATATCTAGACTTCCTC	NA	False	NA	-6	True	AATAAA	-26	NA	74409252	74351668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.39	chr2	-	2214	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	-18	999	-18	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTAAATATCTAG	NA	False	NA	-14	True	AATAAA	-18	NA	74409310	74351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.4	chr2	-	8765	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	10	-5454	-7	5454	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATTGAATATTGTGT	NA	False	NA	-10	True	AATAAA	-20	NA	74409282	74345180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.40	chr2	-	2269	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	10	1042	-7	0	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTAAATATCTAG	NA	False	NA	-14	True	AATAAA	-18	NA	74409282	74351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.41	chr2	-	1765	9	NIC	ENSMUSG00000009207.16	novel	2120	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	88.9929772510168	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTAAATATCTAG	NA	False	NA	-14	True	AATAAA	-18	NA	74409239	74351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74409162
ES.19312.42	chr2	-	2226	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	97.3620097714995	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTTAAATATCTAG	NA	False	NA	-14	True	AATAAA	-18	NA	74409291	74351676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74381804_74381836_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.43	chr2	-	9816	5	ISM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	33123	2	6086	-2	3prime_fragment	FALSE	canonical	3	225	junction_1	27.9676152004421	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTGTTAAATATCT	NA	False	NA	-16	True	AATAAA	-16	NA	74376152	74351678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647
ES.19312.44	chr2	-	4233	5	ISM	ENSMUSG00000009207.16	ENSMUST00000102676.9	1468	14	43402	-704	-1715	-3	3prime_fragment	FALSE	canonical	3	34	junction_2	126.145749036581	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCTTTGTTAAATATC	NA	False	NA	-17	True	AATAAA	-15	NA	74365165	74351679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219
ES.19312.45	chr2	-	6261	12	NIC	ENSMUSG00000009207.16	novel	3195	13	NA	NA	0	-56	intron_retention	FALSE	canonical	3	16	junction_11	73.0327674675343	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGTGTG	NA	False	NA	-70	True	TATAAA	-4	NA	74409260	74351732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74408895
ES.19312.46	chr2	-	2184	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	4	-62	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	96.7151616097864	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTTTGTGTGTGTG	NA	False	NA	-76	True	AATATA	-13	NA	74409288	74351738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74364958_74365013_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.47	chr2	-	1459	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	32	1704	0	2	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGATATTTGTAGTCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	74409260	74352381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.48	chr2	-	6455	12	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	27	4046	-5	-2340	5prime_fragment	FALSE	canonical	3	222	junction_5	31.3487448178215	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCTATTGTGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	74409265	74354723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.49	chr2	-	5029	13	ISM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	-3	4089	-3	-2340	5prime_fragment	FALSE	canonical	3	34	junction_1	69.7305827214047	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGCTATTGTGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	74409295	74354723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.5	chr2	-	868	2	Intergenic	novelGene_16019	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATTGAATATTGTGT	NA	False	NA	-10	True	AATAAA	-20	NA	74346221	74345180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_74345855_74346027
ES.19312.50	chr2	-	2800	9	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	60	14993	6	2079	5prime_fragment	FALSE	canonical	3	222	junction_2	32.8193445242284	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTATCTTTGTAACTG	NA	False	NA	NA	False	NA	NA	NA	74409232	74365670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.51	chr2	-	3969	1	NIC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	231	278	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAAGGGTAATTAA	NA	False	NA	NA	False	NA	NA	NA	74385109	74381140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74381100_74385100
ES.19312.52	chr2	-	3637	2	NIC	ENSMUSG00000009207.16	novel	483	4	NA	NA	-3	-1002	intron_retention	FALSE	canonical	3	324	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGTCTTTTAGTGACT	NA	False	NA	NA	False	AAAAAG	-4	NA	74409278	74400449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_74403971_74409162
ES.19312.6	chr2	-	3686	14	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-6	5454	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.661613042129	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATTGAATATTGTGT	NA	False	NA	-10	True	AATAAA	-20	NA	74409281	74345180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74345850_74347081_74348012_74351715_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.8	chr2	-	8708	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	-18	-5495	-18	5452	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTGATTGAATATTGT	NA	False	NA	-12	True	AATAAA	-18	NA	74409310	74345182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19312.9	chr2	-	3703	15	NNC	ENSMUSG00000009207.16	novel	3321	14	NA	NA	-4	5451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1490774457404	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTTGATTGAATATTG	NA	False	NA	-13	True	AATAAA	-17	NA	74409264	74345183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74345869_74347097_74347999_74351727_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ES.19313.1	chr2	-	576	1	FSM	ENSMUSG00000075279.6	ENSMUST00000173086.2	580	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGACTGGCCGG	NA	False	NA	NA	False	NA	NA	NA	74422252	74421676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_74421700_74422300
ES.19313.2	chr2	-	532	2	Genic_Genomic	ENSMUSG00000075279.6	novel	580	1	NA	NA	1	-7	multi-exon	FALSE	canonical	2	50	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAACACTGACTGG	NA	False	NA	NA	False	NA	NA	NA	74422252	74421680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_74421900_74421939
ES.19314.1	chr2	+	1490	1	ISM	ENSMUSG00000001819.5	ENSMUST00000001872.5	2483	2	1800	0	1800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTATTTGACATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74500453	74501943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_74500500_74501900
ES.19315.1	chr2	+	1844	2	FSM	ENSMUSG00000042499.14	ENSMUST00000142312.3	1111	2	-296	-437	-296	437	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTCCCAGCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	74512370	74514949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74513512_74514246
ES.19316.1	chr2	+	1606	3	NNC	ENSMUSG00000043342.10	novel	2136	2	NA	NA	70	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCAGCCGCTGGCCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	74528140	74530530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_74528377_74528814_74529178_74529523
ES.19316.2	chr2	+	1863	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	251	22	251	-22	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCAGCCGCTGGCCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	74528321	74530530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74529178_74529523
ES.19317.1	chr2	+	1993	2	FSM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	-39	680	-39	-54	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTATGCCTGCAGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	74535209	74537597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74536463_74536857
ES.19317.2	chr2	+	1181	1	ISM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	1843	5	1596	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGAGCAGAGCTCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	74537091	74538272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_74537100_74538300
ES.19318.1	chr2	-	1300	5	NNC	ENSMUSG00000075277.6	novel	1178	4	NA	NA	-562	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGCGTTTGGTTGTGTT	8339	False	NA	NA	False	AATAAA	-35	NA	74593802	74580204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_74580988_74581872_74581987_74582177_74582288_74593342_74593581_74593747
ES.19319.1	chr2	-	209	1	Intergenic	novelGene_16024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTACAGGCATAACCCAC	NA	False	NA	NA	False	NA	NA	NA	74616737	74616528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_74616500_74616700
ES.1932.1	chr1	+	5360	3	NNC	ENSMUSG00000044708.6	novel	5407	2	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGTGTCTCCTTTTAG	3236	False	NA	5	True	AATAAA	-19	NA	172168763	172201652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172169019_172196487_172198487_172198546
ES.19320.1	chr2	+	1271	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	6	1673	6	254	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCTGGCTACTCACTG	NA	False	NA	36	True	AATAAA	-34	NA	74656152	74707102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ES.19320.10	chr2	+	1115	8	NNC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	22	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	294.755588823787	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTCATTTACTTT	NA	False	NA	15	True	AATAAA	-13	NA	74656195	74707081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_74656391_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ES.19320.11	chr2	+	3974	9	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	86	755	intron_retention	FALSE	canonical	3	792	junction_1	53.1658666345241	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74656259	74709530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699774_74700751_74700829_74706646
ES.19320.12	chr2	+	4376	6	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	-13070	234	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	330.50107412836	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTTCATTTACTTTG	2357	False	NA	16	True	AATAAA	-14	NA	74686254	74707082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74689822_74697214_74697292_74698663_74698757_74699647_74699774_74700751_74700829_74706646
ES.19320.13	chr2	+	2867	2	NIC	ENSMUSG00000027099.10	novel	728	3	NA	NA	-928	233	intron_retention	FALSE	canonical	3	805	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTCATTTACTTT	376	False	NA	15	True	AATAAA	-13	NA	74698396	74707081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74700829_74706646
ES.19320.14	chr2	+	4677	1	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	3082	235	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTTACTTTGA	4386	False	NA	17	True	AATAAA	-15	NA	74702406	74707083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74702400_74707100
ES.19320.15	chr2	+	3383	1	Genic_Genomic	ENSMUSG00000027099.10	novel	NA	NA	NA	NA	6820	752	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	391	False	NA	NA	False	NA	NA	NA	74706144	74709527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_74706100_74709500
ES.19320.2	chr2	+	2102	8	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	7	234	intron_retention	FALSE	canonical	3	792	junction_1	49.0946607513049	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTTCATTTACTTTG	NA	False	NA	16	True	AATAAA	-14	NA	74656153	74707082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74699774_74700751_74700829_74706646
ES.19320.3	chr2	+	5545	7	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	-12	780	intron_retention	FALSE	canonical	3	792	junction_1	50.5964425626941	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTAAAGGCATTTGCT	NA	False	NA	NA	False	NA	NA	NA	74656161	74709555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74700829_74706646
ES.19320.4	chr2	+	3715	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	15	-780	-12	780	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTAAAGGCATTTGCT	NA	False	NA	NA	False	NA	NA	NA	74656161	74709555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ES.19320.5	chr2	+	1235	10	NNC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	-12	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	270.123017242967	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTCATTTACTTT	NA	False	NA	15	True	AATAAA	-13	NA	74656161	74707081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_74656388_74677581_74677630_74678642_74678684_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ES.19320.6	chr2	+	3488	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	18	-556	-9	556	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATATCTTGGGCTACAT	NA	False	NA	NA	False	AATAAA	-15	NA	74656164	74709331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ES.19320.9	chr2	+	1685	9	NIC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	13	232	intron_retention	FALSE	canonical	3	767	junction_6	52.5117546364621	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTTTCATTTACTT	NA	False	NA	14	True	AATAAA	-12	NA	74656186	74707080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74699266_74699647_74699774_74700751_74700829_74706646
ES.19321.1	chr2	-	1353	1	Intergenic	novelGene_16025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGATTAAATAAAACA	7914	False	NA	NA	False	NA	NA	NA	74683854	74682501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_74682500_74683900
ES.19322.1	chr2	+	7726	1	Antisense	novelGene_ENSMUSG00000083837.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGGGTGTTTCTGAG	2160	False	NA	NA	False	NA	NA	NA	74714299	74722025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_74714300_74722000
ES.19323.1	chr2	-	859	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-32	-77	-32	77	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTCAAATGGCACAACAA	NA	False	NA	NA	False	NA	NA	NA	75022198	75021339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75021300_75022200
ES.19323.2	chr2	-	728	2	Genic_Genomic	ENSMUSG00000081406.5	novel	750	1	NA	NA	-11	33	multi-exon	FALSE	canonical	0	0	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	75022177	75021383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_75021847_75021912
ES.19324.1	chr2	-	3354	1	Intergenic	novelGene_16026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGTCCTCATGGGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	75203268	75199914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75199900_75203300
ES.19325.1	chr2	+	175	1	Intergenic	novelGene_16029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTTCTCAACTTT	NA	False	NA	3	True	NA	NA	NA	75432787	75432962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75432800_75433000
ES.19326.1	chr2	+	176	1	Intergenic	novelGene_16033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGCTCACAGA	NA	False	NA	NA	False	NA	NA	NA	75446314	75446490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75446300_75446500
ES.19327.1	chr2	-	4033	5	Intergenic	novelGene_16027	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTGCATGTGTGGGT	3938	False	NA	NA	False	AATAAA	-19	NA	75463880	75297211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75300969_75309222_75309281_75387546_75387616_75435320_75435389_75463799
ES.19327.2	chr2	-	178	1	Intergenic	novelGene_16028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAACCCTGGA	NA	False	NA	NA	False	NA	NA	NA	75399644	75399466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75399500_75399600
ES.19327.3	chr2	-	1082	2	Intergenic	novelGene_16030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTAGGACTTTTTCT	3958	False	NA	NA	False	AATAAA	-21	NA	75463860	75439318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75440340_75463799
ES.19327.4	chr2	-	3187	2	Intergenic	novelGene_16031	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTAGGACTTTTTCT	3901	False	NA	NA	False	AATAAA	-21	NA	75463917	75439318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75442388_75463799
ES.19327.5	chr2	-	741	2	Intergenic	novelGene_16032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACCCTTCAGCTTCAT	3936	False	NA	NA	False	AATGAA	-15	NA	75463882	75441729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75442388_75463799
ES.19327.6	chr2	-	2630	1	Intergenic	novelGene_16034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75449842	75447212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75447200_75449800
ES.19327.7	chr2	-	690	1	Intergenic	novelGene_16035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75454016	75453326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75453300_75454000
ES.19327.8	chr2	-	136	1	Intergenic	novelGene_16036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGATCTTTATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	75457381	75457245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75457200_75457400
ES.19327.9	chr2	-	2499	2	Genic_Genomic	ENSMUSG00000082152.2	novel	745	1	NA	NA	-154	1803	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGTAAACATTTCTT	3938	False	NA	NA	False	TATAAA	-11	NA	75463880	75461178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_75463597_75463799
ES.19328.1	chr2	+	293	2	Intergenic	novelGene_16037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGTTGCTTGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	75464341	75464731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75464502_75464598
ES.19328.2	chr2	+	681	2	Intergenic	novelGene_16038	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	75464341	75465119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75464502_75464598
ES.19329.1	chr2	-	178	1	Intergenic	novelGene_16039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTAG	2436	False	NA	NA	False	NA	NA	NA	75465382	75465204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75465200_75465400
ES.1933.1	chr1	+	135	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAGAAAAAAAAAAA	4679	False	NA	NA	False	NA	NA	NA	172203341	172203476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_172203300_172203500
ES.19330.1	chr2	+	142	1	Intergenic	novelGene_16040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75467470	75467612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75467500_75467600
ES.19331.1	chr2	-	6617	1	Intergenic	novelGene_16041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75484478	75477861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75477900_75484500
ES.19332.1	chr2	+	2098	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-160	-284	-160	2	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTTTGTGCATTT	7315	False	NA	NA	False	AAAAAG	-15	NA	75489444	75496467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.10	chr2	+	1262	9	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-8	-73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	3749.80849302668	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7467	False	NA	NA	False	NA	NA	NA	75489596	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493210_75495577_75495646_75495741
ES.19332.100	chr2	+	1561	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-2	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3458.884908464	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7492	False	NA	NA	False	NA	NA	NA	75489621	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495650_75495748
ES.19332.102	chr2	+	1640	10	NIC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-2	-75	intron_retention	FALSE	canonical	3	3912	junction_1	2151.57901247284	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7492	False	NA	NA	False	NA	NA	NA	75489621	75496108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489734_75491809_75491933_75492014_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.103	chr2	+	5059	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3503.31009332602	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTTTTATCATTTT	7494	False	NA	2	True	ATTAAA	-17	NA	75489623	75499750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493991_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.104	chr2	+	1233	9	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_6	3844.61544728468	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7494	False	NA	NA	False	NA	NA	NA	75489623	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493077_75495451_75495495_75495577_75495646_75495741
ES.19332.106	chr2	+	5118	12	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3373.81559260321	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7494	False	NA	3	True	ATTAAA	-18	NA	75489623	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741_75498260_75498344
ES.19332.108	chr2	+	1666	10	NIC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_6	3689.90942376037	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7496	False	NA	NA	False	AAAAAG	-13	NA	75489625	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75494016_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.11	chr2	+	2626	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_10	3442.7234582522	2127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7468	False	NA	3	True	ATTAAA	-18	NA	75489597	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75498344
ES.19332.110	chr2	+	1548	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	4	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3409.59919052079	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7498	False	NA	NA	False	NA	NA	NA	75489627	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492024_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.112	chr2	+	2285	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	9	383	at_least_one_novel_splicesite	FALSE	canonical	3	336	junction_7	3396.67864979895	2120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGCTGGCATGCTTT	7503	False	NA	19	True	AATAAA	-19	NA	75489632	75496848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493264_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.113	chr2	+	3461	9	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	10	-1441	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3881.97499468698	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAAGGTAAGAGTAATC	7504	False	NA	NA	False	ATTAAA	-17	NA	75489633	75498310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75495371_75495495_75495577_75495646_75495741
ES.19332.114	chr2	+	2766	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	10	850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3506.90465367965	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTCTCTTGTTGCTC	7504	False	NA	NA	False	AATAAA	-28	NA	75489633	75497315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492821_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.115	chr2	+	1258	9	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	10	-73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	3749.80849302668	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7504	False	NA	NA	False	NA	NA	NA	75489633	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493243_75495577_75495646_75495741
ES.19332.118	chr2	+	1849	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	12	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4161.04174576512	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	7506	False	NA	NA	False	AATAAA	-23	NA	75489635	75496421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489727_75491809_75491933_75492014_75492162_75492239_75492451_75492835_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.119	chr2	+	1724	9	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1140	10	NA	NA	12	-73	intron_retention	FALSE	canonical	3	3912	junction_1	2218.5170581945	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7506	False	NA	NA	False	NA	NA	NA	75489635	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489734_75491809_75491933_75492014_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.12	chr2	+	1602	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-6	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3161.35556367834	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7469	False	NA	NA	False	NA	NA	NA	75489598	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491794_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.121	chr2	+	2876	10	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	14	1171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3663.85558909979	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCCTTTTATTCAT	7508	False	NA	NA	False	ATTAAA	-15	NA	75489637	75497636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493077_75494007_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.122	chr2	+	1888	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	14	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3409.59919052079	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAAAAGTTGCTGTTT	7508	False	NA	NA	False	AATGAA	-4	NA	75489637	75496452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491939_75492022_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.124	chr2	+	2506	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	15	850	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3665.29337919293	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTCTCTTGTTGCTC	7509	False	NA	NA	False	AATAAA	-28	NA	75489638	75497315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493234_75495371_75495495_75495577_75495646_75495741
ES.19332.126	chr2	+	1514	8	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3994.47867917296	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCTGTTTGGTTTT	7518	False	NA	NA	False	AAAAAG	-6	NA	75489647	75496458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493077_75495577_75495646_75495741
ES.19332.127	chr2	+	1438	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-14	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3537.85164329993	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7518	False	NA	NA	False	NA	NA	NA	75489647	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493038_75493225_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.128	chr2	+	1525	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-10	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3520.77146233606	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7522	False	NA	NA	False	NA	NA	NA	75489651	75496108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495378_75495495_75495577_75495646_75495741
ES.19332.129	chr2	+	1420	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	49	185	-8	-185	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTTGTAGCTTTGTCT	7524	False	NA	NA	False	NA	NA	NA	75489653	75495998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.13	chr2	+	1460	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-1	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3478.37078098353	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7474	False	NA	NA	False	NA	NA	NA	75489603	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493225_75493991_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.130	chr2	+	2061	9	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1140	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	3912	junction_1	2218.5170581945	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7524	False	NA	NA	False	AAAAAG	-13	NA	75489653	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489734_75491809_75491933_75492014_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.131	chr2	+	2551	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_10	4021.72644644063	2127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTTTTATCATTTT	7524	False	NA	2	True	ATTAAA	-17	NA	75489653	75499750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495595_75495646_75498344
ES.19332.132	chr2	+	2724	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-6	845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3520.77146233606	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAATTTGCTCTCTTGT	7526	False	NA	NA	False	AATAAA	-23	NA	75489655	75497310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494053_75495371_75495495_75495577_75495646_75495741
ES.19332.133	chr2	+	1516	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-5	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3520.77146233606	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7527	False	NA	NA	False	NA	NA	NA	75489656	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494053_75495378_75495495_75495577_75495646_75495741
ES.19332.134	chr2	+	2700	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-3	834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3161.35556367834	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTGCTAGTATTTCAATT	7529	False	NA	NA	False	AATAAA	-12	NA	75489658	75497299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489718_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.135	chr2	+	1862	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3458.884908464	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCTGTTTGGTTTT	7539	False	NA	NA	False	AAAAAG	-6	NA	75489668	75496458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495650_75495748
ES.19332.136	chr2	+	3746	9	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	355	-275	298	-7	intron_retention	FALSE	canonical	3	8907	junction_5	835.936740653861	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCTGTTTGGTTTT	7830	False	NA	NA	False	AAAAAG	-6	NA	75489959	75496458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.137	chr2	+	1726	11	NNC	ENSMUSG00000059005.14	novel	754	6	NA	NA	481	-73	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_1	3150.31753320201	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	8013	False	NA	NA	False	NA	NA	NA	75490142	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75490417_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.138	chr2	+	1971	11	NNC	ENSMUSG00000059005.14	novel	754	6	NA	NA	590	-1	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_1	3150.31753320201	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTGGTTTTTGTGCA	8122	False	NA	NA	False	AAAAAG	-12	NA	75490251	75496464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75490417_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.139	chr2	+	1759	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-1025	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3320.1554329226	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	9678	False	NA	NA	False	AATAAA	-23	NA	75491807	75496421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75491933_75492014_75492162_75492245_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.14	chr2	+	1677	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000090792.11	1140	10	-57	-480	0	-73	multi-exon	FALSE	canonical	3	3912	junction_1	2101.42958982395	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7475	False	NA	NA	False	NA	NA	NA	75489604	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.140	chr2	+	1765	10	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	2203	-238	-1025	-44	3prime_fragment	FALSE	canonical	3	8907	junction_5	831.603018420997	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	9678	False	NA	NA	False	AATAAA	-23	NA	75491807	75496421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.141	chr2	+	2193	10	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	2203	-666	-1025	384	3prime_fragment	FALSE	canonical	3	8907	junction_5	831.603018420997	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	9678	False	NA	20	True	AATAAA	-20	NA	75491807	75496849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.143	chr2	+	1476	8	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	-1021	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_5	3706.76254586513	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	9682	False	NA	NA	False	AAAAAG	-13	NA	75491811	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493077_75495451_75495495_75495577_75495646_75495741
ES.19332.144	chr2	+	7636	4	NIC	ENSMUSG00000059005.14	novel	1074	10	NA	NA	-973	-2	intron_retention	FALSE	canonical	3	8907	junction_3	1216.95713427658	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTTTTATCATTT	9730	False	NA	1	True	ATTAAA	-16	NA	75491859	75499749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75491933_75492014_75492921_75493004_75493101_75493188
ES.19332.145	chr2	+	1546	9	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-709	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3391.92522535138	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCTCAAAAGTTGC	9994	False	NA	NA	False	NA	NA	NA	75492123	75496447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75492162_75492239_75492440_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.146	chr2	+	4164	9	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-576	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3398.16246070946	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTTTTATCATTT	NA	False	NA	1	True	ATTAAA	-16	NA	75492256	75499749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741_75496909_75497548
ES.19332.147	chr2	+	1315	7	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-530	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	3797.38029948133	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	NA	False	NA	NA	False	AAAAAG	-13	NA	75492302	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75495386_75495495_75495577_75495646_75495741
ES.19332.149	chr2	+	2073	6	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	3398	-1117	170	835	3prime_fragment	FALSE	canonical	3	8907	junction_1	776.208116422394	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGCTAGTATTTCAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	75493002	75497300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.15	chr2	+	1872	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-6	3284	0	2	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTTTGTGCATTT	7475	False	NA	NA	False	AAAAAG	-15	NA	75489604	75496467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.151	chr2	+	4522	4	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	3576	2	354	-2	intron_retention	FALSE	canonical	3	9771	junction_2	459.655184773205	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTTTTATCATTT	NA	False	NA	1	True	ATTAAA	-16	NA	75493186	75499749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.152	chr2	+	2313	5	ISM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	3582	-1453	354	1171	3prime_fragment	FALSE	canonical	3	9771	junction_2	461.594722131872	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCCTTTTATTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	75493186	75497636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.153	chr2	+	4439	3	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	4303	3	1081	-3	intron_retention	FALSE	canonical	3	9771	junction_1	520.5	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGGTTTTATCATT	NA	False	NA	0	True	ATTAAA	-15	NA	75493913	75499748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75494059_75495371_75495495_75495577
ES.19332.154	chr2	+	4346	4	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	4303	0	1081	0	3prime_fragment	FALSE	canonical	3	9771	junction_1	527.676879244191	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	75493913	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.156	chr2	+	5665	2	NIC	ENSMUSG00000059005.14	novel	754	6	NA	NA	1164	-7	intron_retention	FALSE	canonical	3	10812	junction_1	0	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTTTTAT	NA	False	NA	-4	True	ATTAAA	-11	NA	75493996	75499744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75495495_75495577
ES.19332.157	chr2	+	3481	1	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	1187	1035	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTCATGTTAGAAACTG	NA	False	NA	NA	False	NA	NA	NA	75494019	75497500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75494000_75497500
ES.19332.158	chr2	+	4710	2	ISM	ENSMUSG00000059005.14	ENSMUST00000141974.2	754	6	1666	-3492	1666	-460	3prime_fragment	FALSE	canonical	3	10812	junction_1	0	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCCACTGTCATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	75494498	75499291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75495495_75495577
ES.19332.159	chr2	+	1114	2	ISM	ENSMUSG00000059005.14	ENSMUST00000141974.2	754	6	2081	-311	2081	-73	3prime_fragment	FALSE	canonical	3	10812	junction_1	0	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	75494913	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75495495_75495577
ES.19332.16	chr2	+	1611	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000164947.9	1074	10	-57	-480	0	-73	multi-exon	FALSE	canonical	3	3726	junction_1	2155.72848103619	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7475	False	NA	NA	False	NA	NA	NA	75489604	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.160	chr2	+	7174	2	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	5443	-2559	2221	2559	intron_retention	FALSE	canonical	3	10812	junction_1	0	2129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75495053	75502310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75495495_75495577
ES.19332.162	chr2	+	1005	1	Intergenic	novelGene_16042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACCAGCCAGGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	75501162	75502167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75501200_75502200
ES.19332.17	chr2	+	1863	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3161.35556367834	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7475	False	NA	NA	False	AAAAAG	-13	NA	75489604	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489661_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.18	chr2	+	5156	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-6	0	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7475	False	NA	3	True	ATTAAA	-18	NA	75489604	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.19	chr2	+	3426	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000090792.11	1140	10	-57	-2229	0	1394	multi-exon	FALSE	canonical	3	3912	junction_1	2101.42958982395	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTGTACTGAGTTAGT	7475	False	NA	NA	False	NA	NA	NA	75489604	75497859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.2	chr2	+	1673	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-46	27	-46	-27	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGCAGTTTCGAAG	7429	False	NA	NA	False	NA	NA	NA	75489558	75496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.20	chr2	+	2929	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	0	-1275	0	993	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTGTTAATGGGCATA	7475	False	NA	NA	False	AATAAA	-14	NA	75489604	75497458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.21	chr2	+	3264	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-6	1892	0	1394	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTGTACTGAGTTAGT	7475	False	NA	NA	False	NA	NA	NA	75489604	75497859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.23	chr2	+	4792	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000164947.9	1074	10	-57	-3661	0	-460	multi-exon	FALSE	canonical	3	3726	junction_1	2155.72848103619	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCCACTGTCATTTC	7475	False	NA	NA	False	AATAAA	-14	NA	75489604	75499291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.24	chr2	+	3044	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-5	2111	1	1175	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTTTTATTCATATAA	7476	False	NA	NA	False	ATTAAA	-19	NA	75489605	75497640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.25	chr2	+	1923	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_3	3402.59361223171	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7476	False	NA	NA	False	AAAAAG	-13	NA	75489605	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492251_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.26	chr2	+	5328	9	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	3726	junction_1	2275.62749587888	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7477	False	NA	3	True	ATTAAA	-18	NA	75489606	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.27	chr2	+	1595	10	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	2	-75	intron_retention	FALSE	canonical	3	3726	junction_1	2203.89498640727	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7477	False	NA	NA	False	NA	NA	NA	75489606	75496108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.3	chr2	+	5328	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-46	-3628	-46	60	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTGAAGTCTTAAATAG	7429	False	NA	63	True	NA	NA	NA	75489558	75499811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.30	chr2	+	1477	8	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4021.72846382432	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7478	False	NA	NA	False	AAAAAG	-13	NA	75489607	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493059_75495577_75495646_75495741
ES.19332.32	chr2	+	5306	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000090792.11	1140	10	-52	-4114	-1	-7	multi-exon	FALSE	canonical	3	3912	junction_1	2101.42958982395	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTTTTAT	7480	False	NA	-4	True	ATTAAA	-11	NA	75489609	75499744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.33	chr2	+	3719	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-1	1432	-1	-1432	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTAATCTTTTTGATT	7480	False	NA	NA	False	ATTAAA	-26	NA	75489609	75498319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.34	chr2	+	857	7	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	-1	70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4104.97347399739	2069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGTGTAATAATTTTT	7480	False	NA	10	True	GATAAA	-21	NA	75489609	75495700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493048_75495581
ES.19332.35	chr2	+	1426	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-1	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3478.37078098353	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTCAATATTTGTGT	7480	False	NA	NA	False	NA	NA	NA	75489609	75496101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493234_75494019_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.36	chr2	+	2418	8	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3726	junction_1	2411.17681488792	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.37	chr2	+	2714	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2436	0	850	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTCTCTTGTTGCTC	7481	False	NA	NA	False	AATAAA	-28	NA	75489610	75497315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.38	chr2	+	2563	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2587	0	699	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGTGCTGAACAATTTC	7481	False	NA	NA	False	TATAAA	-20	NA	75489610	75497164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.39	chr2	+	1440	8	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4021.72846382432	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCTGTTTGGTTTT	7481	False	NA	NA	False	AAAAAG	-6	NA	75489610	75496458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493050_75495595_75495646_75495741
ES.19332.4	chr2	+	2355	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-32	-669	-32	387	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGCATGCTTTCCTG	7443	False	NA	23	True	AATAAA	-23	NA	75489572	75496852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.40	chr2	+	2853	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2297	0	989	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATTTGTTAATGGG	7481	False	NA	NA	False	AATAAA	-10	NA	75489610	75497454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.42	chr2	+	5122	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3563.29130018863	2127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTTTTAT	7481	False	NA	-4	True	ATTAAA	-11	NA	75489610	75499744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493200_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.44	chr2	+	2475	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4387.48430689044	2127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTTTTAT	7481	False	NA	-4	True	ATTAAA	-11	NA	75489610	75499744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493898_75494059_75495371_75495495_75495577_75495646_75498344
ES.19332.45	chr2	+	1727	10	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3663.85558909979	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493056_75493991_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.46	chr2	+	3325	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-1677	0	1395	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTACTGAGTTAGTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75497860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.47	chr2	+	2406	10	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1140	10	NA	NA	0	384	intron_retention	FALSE	non_canonical	0	0	junction_5	3640.43539656223	2120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGGCATGCTTTC	7481	False	NA	20	True	AATAAA	-20	NA	75489610	75496849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492917_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.51	chr2	+	1924	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3161.35556367834	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491815_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.52	chr2	+	1672	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	3664.78726918699	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493222_75495371_75495495_75495577_75495646_75495741
ES.19332.53	chr2	+	1924	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	336	junction_7	3396.67864979895	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493264_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.54	chr2	+	4552	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3503.31009332602	2126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCCACTGTCATTTC	7481	False	NA	NA	False	AATAAA	-14	NA	75489610	75499291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493243_75494025_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.55	chr2	+	1278	8	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-73	intron_retention	FALSE	non_canonical	0	0	junction_6	4006.57519279374	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493079_75495451_75495495_75495577
ES.19332.56	chr2	+	1743	11	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	0	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3478.37078098353	2108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATAGCATTAAGATT	7481	False	NA	NA	False	AATAAA	-18	NA	75489610	75496416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493234_75494016_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.58	chr2	+	1812	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	3503.31009332602	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTGGTTTTTGTGCA	7481	False	NA	NA	False	AAAAAG	-12	NA	75489610	75496464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493234_75493929_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.6	chr2	+	1583	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-22	-75	at_least_one_novel_splicesite	FALSE	canonical	3	832	junction_9	3268.23003474358	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7453	False	NA	NA	False	NA	NA	NA	75489582	75496108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495595_75495646_75495741
ES.19332.60	chr2	+	1840	10	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	61	junction_4	3676.99888025984	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.61	chr2	+	1875	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3537.85164329993	2108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATAGCATTAAGATT	7481	False	NA	NA	False	AATAAA	-18	NA	75489610	75496416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493194_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.63	chr2	+	4882	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	3578.14906976108	2127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGGTTTTATCAT	7481	False	NA	-1	True	ATTAAA	-14	NA	75489610	75499747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495476_75495918
ES.19332.64	chr2	+	4691	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	459	0	-459	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTCCACTGTCATTTCT	7481	False	NA	NA	False	AATAAA	-15	NA	75489610	75499292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.65	chr2	+	2652	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	835	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	3503.31009332602	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGCTAGTATTTCAATTT	7481	False	NA	NA	False	AATAAA	-13	NA	75489610	75497300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493274_75493965_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.66	chr2	+	1801	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-45	at_least_one_novel_splicesite	FALSE	canonical	3	832	junction_9	3295.14592089637	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCATTAAGATTACCT	7481	False	NA	NA	False	AATAAA	-22	NA	75489610	75496420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495595_75495646_75495741
ES.19332.67	chr2	+	2562	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3503.31009332602	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTAGTATTTCAATTTG	7481	False	NA	NA	False	AATAAA	-14	NA	75489610	75497301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493243_75494025_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.68	chr2	+	2240	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	382	at_least_one_novel_splicesite	FALSE	canonical	3	336	junction_7	3422.39595751281	2120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGGCTGGCATGCTT	7481	False	NA	18	True	AATAAA	-18	NA	75489610	75496847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493264_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.69	chr2	+	1591	10	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-73	intron_retention	FALSE	canonical	3	3726	junction_1	2096.20348767203	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.7	chr2	+	2277	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	-28	2901	-22	385	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCTGGCATGCTTTCC	7453	False	NA	21	True	AATAAA	-21	NA	75489582	75496850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.70	chr2	+	2151	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	-462	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_10	3442.7234582522	2126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGTTCCACTGTCATT	7481	False	NA	NA	False	AATAAA	-12	NA	75489610	75499289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75498344
ES.19332.71	chr2	+	1512	12	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	0	-73	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	3373.58104361689	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75493957_75494019_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.73	chr2	+	1726	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	3689.90942376037	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493056_75493926_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.74	chr2	+	2612	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-964	0	682	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTACTGTTGCGCCAGC	7481	False	NA	NA	False	TATAAA	-3	NA	75489610	75497147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.75	chr2	+	1699	10	NNC	ENSMUSG00000059005.14	novel	1734	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	259	junction_6	3597.67625963424	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493056_75494019_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.76	chr2	+	2988	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	1171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3503.31009332602	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGTCCTTTTATTCAT	7481	False	NA	NA	False	ATTAAA	-15	NA	75489610	75497636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493274_75493965_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.77	chr2	+	2624	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3689.90942376037	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTAGTATTTCAATTTG	7481	False	NA	NA	False	AATAAA	-14	NA	75489610	75497301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493106_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.8	chr2	+	2810	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-22	-1134	-22	852	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTCTTGTTGCTCTA	7453	False	NA	NA	False	AATAAA	-30	NA	75489582	75497317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.81	chr2	+	5065	12	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3398.17188334556	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7481	False	NA	3	True	ATTAAA	-18	NA	75489610	75499751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741_75498260_75498344
ES.19332.82	chr2	+	2698	8	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1140	10	NA	NA	0	-71	intron_retention	FALSE	canonical	3	3912	junction_1	2304.20134466038	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTAGTTCAGTTTT	7481	False	NA	NA	False	NA	NA	NA	75489610	75496112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492921_75493004_75493101_75493188_75494059_75495371_75495495_75495577
ES.19332.83	chr2	+	5490	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	6	-3842	0	274	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGCCCCAGCTGTCCTG	7481	False	NA	NA	False	AAAAAG	-45	NA	75489610	75500025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.86	chr2	+	2508	10	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	3726	junction_1	2176.57110561033	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7482	False	NA	NA	False	AAAAAG	-13	NA	75489611	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.87	chr2	+	4668	12	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	5	-458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3373.81559260321	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCCACTGTCATTTCTG	7486	False	NA	NA	False	AATAAA	-16	NA	75489615	75499293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741_75498260_75498344
ES.19332.88	chr2	+	5240	10	FSM	ENSMUSG00000059005.14_ENSMUSG00000093242.4	ENSMUST00000164947.9	1074	10	-46	-4120	5	-1	multi-exon	FALSE	canonical	3	3726	junction_1	2155.72848103619	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTTTTATCATTTT	7486	False	NA	2	True	ATTAAA	-17	NA	75489615	75499750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.9	chr2	+	3122	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	-11	-1457	-11	1175	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTTTTATTCATATAA	7464	False	NA	NA	False	ATTAAA	-19	NA	75489593	75497640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.90	chr2	+	1555	10	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1074	10	NA	NA	6	-75	intron_retention	FALSE	canonical	0	0	junction_6	3668.9121945555	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	7487	False	NA	NA	False	NA	NA	NA	75489616	75496108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493059_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.91	chr2	+	2489	10	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-5	850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3689.90942376037	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTCTCTTGTTGCTC	7489	False	NA	NA	False	AATAAA	-28	NA	75489618	75497315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493051_75494000_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.92	chr2	+	1612	10	Fusion	ENSMUSG00000059005.14_ENSMUSG00000093242.4	novel	1074	10	NA	NA	-4	-73	intron_retention	FALSE	non_canonical	0	0	junction_4	3625.30593345046	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	7490	False	NA	NA	False	NA	NA	NA	75489619	75496110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492814_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ES.19332.94	chr2	+	1901	11	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	832	junction_9	3268.23003474358	2109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7492	False	NA	NA	False	AAAAAG	-13	NA	75489621	75496465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495595_75495646_75495741
ES.19332.95	chr2	+	1749	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	11	3390	-2	-104	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTGTGTTTTAGATAA	7492	False	NA	NA	False	AATAGA	-14	NA	75489621	75496361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.96	chr2	+	5512	10	NIC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	3726	junction_1	2201.91289452188	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTTTTAT	7492	False	NA	-4	True	ATTAAA	-11	NA	75489621	75499744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.98	chr2	+	3767	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	17	-2130	-2	-1438	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGTAAGAGTAATCTTT	7492	False	NA	NA	False	ATTAAA	-20	NA	75489621	75498313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ES.19332.99	chr2	+	4591	12	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	-2	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3398.17188334556	2126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGGTTCCACTGTCAT	7492	False	NA	NA	False	AATAAA	-11	NA	75489621	75499288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741_75498260_75498344
ES.19333.1	chr2	+	9176	1	Antisense	novelGene_ENSMUSG00002075749.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75511778	75520954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_75511800_75521000
ES.19334.1	chr2	+	3936	1	NIC	ENSMUSG00000087222.2	novel	1427	2	NA	NA	1314	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTATCCCATAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75536427	75540363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75536400_75540400
ES.19335.1	chr2	+	104	1	Intergenic	novelGene_16043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAATAAAACCT	NA	False	NA	NA	False	NA	NA	NA	75561197	75561301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75561200_75561300
ES.19336.1	chr2	+	146	1	Intergenic	novelGene_16044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAGGCTGTTTCTTTA	970	False	NA	NA	False	AATAAA	-25	NA	75583417	75583563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75583400_75583600
ES.19337.1	chr2	-	2596	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	-121	0	-121	0	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75535106	75505856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ES.19337.10	chr2	-	2515	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	509	-6	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	223.600648478487	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGGACTTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	75534324	75505862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534000
ES.19337.11	chr2	-	2931	4	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	18912	-6	intron_retention	FALSE	canonical	1	5	junction_3	244.241683584109	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGGACTTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	75515921	75505862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75509774_75515766
ES.19337.12	chr2	-	2267	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	18594	-8	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_4	223.169638391964	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTACTTTGGACTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	75516239	75505864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75516161
ES.19337.13	chr2	-	2108	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	94	273	-58	-273	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTAACTCTCAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	75534891	75506129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ES.19337.14	chr2	-	926	3	ISM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	94	2590	-58	-2590	5prime_fragment	FALSE	canonical	3	545	junction_1	28.5	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTATAGCTGGAAACAG	NA	False	NA	NA	False	NA	NA	NA	75534891	75508446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_75508922_75509506_75509774_75534707
ES.19337.15	chr2	-	1351	2	FSM	ENSMUSG00000015839.7	ENSMUST00000152371.2	1447	2	-58	154	-58	-154	multi-exon	FALSE	canonical	3	19	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCACTGTGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	75534891	75521549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75522717_75534707
ES.19337.17	chr2	-	3844	1	Antisense	novelGene_ENSMUSG00000087222.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAGAAGATATTTGTG	NA	False	NA	NA	False	NA	NA	NA	75540154	75536310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_75536300_75540200
ES.19337.18	chr2	-	176	1	Intergenic	novelGene_16045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTGCTGACAT	NA	False	NA	NA	False	NA	NA	NA	75596352	75596176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75596200_75596400
ES.19337.2	chr2	-	3154	4	NIC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-57	-1	intron_retention	FALSE	canonical	3	494	junction_1	44.1134900002256	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGACTTTTTGAATTT	NA	False	NA	0	True	AATAAA	-21	NA	75534890	75505857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_75507529_75507888_75508922_75509506_75509774_75534707
ES.19337.3	chr2	-	2312	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	475	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	215.843693445048	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGACTTTTTGAATTT	NA	False	NA	0	True	AATAAA	-21	NA	75534358	75505857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534242
ES.19337.4	chr2	-	3530	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	15922	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	230.066702284359	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGACTTTTTGAATTT	NA	False	NA	0	True	AATAAA	-21	NA	75518911	75505857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75517577
ES.19337.5	chr2	-	2186	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	18396	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	259.381355343826	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGACTTTTTGAATTT	NA	False	NA	0	True	AATAAA	-21	NA	75516437	75505857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75507997_75508831_75508922_75509506_75509774_75516387
ES.19337.6	chr2	-	2948	4	NIC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-41	-1	intron_retention	FALSE	canonical	3	494	junction_1	44.0908153700972	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGACTTTTTGAATTT	NA	False	NA	0	True	AATAAA	-21	NA	75534874	75505857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_75507529_75507888_75508057_75508831_75509774_75534707
ES.19337.7	chr2	-	2705	7	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-64579	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	265.079704994554	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGGACTTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	75599564	75505862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75564495_75564750_75569018_75569131_75599416
ES.19337.8	chr2	-	4061	2	NIC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	602	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGGACTTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	75534857	75505862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_75509774_75534707
ES.19337.9	chr2	-	2278	5	NNC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	238.209335459381	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACTTTGGACTTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	75534854	75505862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75507529_75507888_75507997_75508831_75508922_75509506_75509774_75534707
ES.19338.1	chr2	+	1232	4	FSM	ENSMUSG00000086813.2	ENSMUST00000135682.2	1939	4	0	707	0	-707	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGAGGTGGTTTGTTT	NA	False	NA	NA	False	CATAAA	-13	NA	75607531	75611943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75607585_75607994_75608131_75609271_75609426_75611054
ES.19339.1	chr2	-	3464	3	Antisense	novelGene_ENSMUSG00000086813.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCACATCAAACCTGGT	NA	False	NA	NA	False	NA	NA	NA	75614471	75609179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_75609424_75611052_75613795_75613993
ES.19339.2	chr2	-	168	1	Intergenic	novelGene_16046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAGAAAGTGGGGCCA	NA	False	NA	NA	False	NA	NA	NA	75613294	75613126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75613100_75613300
ES.19339.3	chr2	-	2492	1	Intergenic	novelGene_16047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCATCCCTACTGCAT	NA	False	NA	NA	False	NA	NA	NA	75616287	75613795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75613800_75616300
ES.1934.1	chr1	-	242	1	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCTACCGAAATACGTC	10003	False	NA	NA	False	AATAAA	-28	NA	172203950	172203708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_172203700_172204000
ES.19340.1	chr2	-	179	1	Intergenic	novelGene_16048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCATAATTTGA	NA	False	NA	NA	False	NA	NA	NA	75622190	75622011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75622000_75622200
ES.19341.1	chr2	-	156	1	Intergenic	novelGene_16049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	9850	False	NA	NA	False	NA	NA	NA	75624007	75623851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75623900_75624000
ES.19342.1	chr2	-	180	1	Intergenic	novelGene_16050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAAGCTACAATTT	NA	False	NA	NA	False	NA	NA	NA	75643879	75643699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75643700_75643900
ES.19343.1	chr2	+	5581	1	Intergenic	novelGene_16051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCATTAGATTGAAGGCT	NA	False	NA	NA	False	NA	NA	NA	75656352	75661933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_75656400_75661900
ES.19344.1	chr2	+	5760	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	-97	1696	-97	-1696	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGAGCTGTTTTTTCTT	390	False	NA	26	True	AATAAA	-37	NA	75662423	75759998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.10	chr2	+	4221	12	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	-10	4178	2	2863	5prime_fragment	FALSE	canonical	3	679	junction_7	50.2328462559629	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAAAAAACTTTATT	489	False	NA	NA	False	NA	NA	NA	75662522	75721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459
ES.19344.12	chr2	+	2958	14	FSM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	-10	-359	2	359	multi-exon	FALSE	canonical	3	643	junction_12	57.9822458033696	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCTAGTGAGAAAGGAT	489	False	NA	NA	False	NA	NA	NA	75662522	75725911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388
ES.19344.15	chr2	+	4196	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	64	3099	52	2103	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCTCTTCTTTCA	551	False	NA	NA	False	NA	NA	NA	75662584	75758595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.16	chr2	+	5475	19	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	54	-1705	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	181.603658798189	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	553	False	NA	17	True	AATAAA	-28	NA	75662586	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.18	chr2	+	5371	17	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	54	-1700	combination_of_known_splicesites	FALSE	canonical	1	31	junction_14	181.376292207664	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	553	False	NA	22	True	AATAAA	-33	NA	75662586	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75739944_75740045_75741964_75742023_75756265
ES.19344.19	chr2	+	3132	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	59	1034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	176.331986687288	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGCAGACATTTTTACA	558	False	NA	NA	False	AATAAA	-19	NA	75662591	75757526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742035_75756265
ES.19344.2	chr2	+	3245	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	-53	4167	-53	1035	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAGACATTTTTACAT	434	False	NA	NA	False	AATAAA	-20	NA	75662467	75757527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.20	chr2	+	2822	14	NNC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	59	2863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.367963777511	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAAAAAACTTTATT	558	False	NA	NA	False	NA	NA	NA	75662591	75721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662617_75662810_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75719647
ES.19344.21	chr2	+	9207	19	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	61	-1703	intron_retention	FALSE	canonical	3	652	junction_12	61.1032570710544	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	560	False	NA	19	True	AATAAA	-30	NA	75662593	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.22	chr2	+	3634	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	79	3646	67	1556	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCGGACACTCAAGGAAA	566	False	NA	NA	False	ATTAAA	-19	NA	75662599	75758048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.24	chr2	+	4743	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	72	-2521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	176.623564839207	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTGTGTATATTATATC	571	False	NA	7	True	AATAAA	-13	NA	75662604	75759173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741975_75742023_75756265
ES.19344.25	chr2	+	5546	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	72	-1705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	178.080765392476	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	571	False	NA	17	True	AATAAA	-28	NA	75662604	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724478_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.26	chr2	+	2106	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	84	5169	72	33	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCTACATCTATAG	571	False	NA	NA	False	TTTAAA	-23	NA	75662604	75756525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.27	chr2	+	5557	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	73	-1706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	177.520706138842	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAGGAAGTGTGGAGCT	572	False	NA	16	True	AATAAA	-27	NA	75662605	75759988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718501_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.28	chr2	+	2567	15	NNC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	73	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	260.714295499021	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCCATGGTTGTTGTT	572	False	NA	NA	False	AATAAA	-19	NA	75662605	75725550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75671629_75671683_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388
ES.19344.29	chr2	+	1591	11	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	73	17242	73	3	5prime_fragment	FALSE	canonical	3	679	junction_7	52.2421285936934	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACGTGTGGTGGTGCAT	572	False	NA	NA	False	AATAAA	-22	NA	75662605	75708310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814
ES.19344.3	chr2	+	4894	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	-45	2510	-45	-2510	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTATATCAGATATAAACA	442	False	NA	18	True	AATAAA	-24	NA	75662475	75759184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.30	chr2	+	3293	3	NIC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	73	2863	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	382.5	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAAAAAACTTTATT	572	False	NA	NA	False	NA	NA	NA	75662605	75721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75707814_75707943_75718459
ES.19344.31	chr2	+	5514	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	73	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	175.127923169563	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	572	False	NA	22	True	AATAAA	-33	NA	75662605	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75740004_75740045_75741964_75742023_75756265
ES.19344.32	chr2	+	8664	13	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	73	-1705	intron_retention	FALSE	canonical	0	0	junction_1	215.941478697869	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	572	False	NA	17	True	AATAAA	-28	NA	75662605	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.35	chr2	+	7218	19	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	74	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	182.288478808105	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATCATTGTTTACAGAA	573	False	NA	0	True	AATAAA	-12	NA	75662606	75761689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75687335_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.37	chr2	+	5618	21	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	79	-1703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.451998263139	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	578	False	NA	19	True	AATAAA	-30	NA	75662611	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75671629_75671683_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.38	chr2	+	4712	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	81	-2521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	237.253338889897	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTGTGTATATTATATC	580	False	NA	7	True	AATAAA	-13	NA	75662613	75759173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683127_75684513_75684635_75684874_75684950_75687360_75687433_75689245_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.40	chr2	+	5807	21	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	82	-1703	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	230.874700866076	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	581	False	NA	19	True	AATAAA	-30	NA	75662614	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75663436_75663682_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.41	chr2	+	5431	18	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	82	-1702	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	186.288591830973	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGTGTGGAGCTGTTT	581	False	NA	20	True	AATAAA	-31	NA	75662614	75759992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.45	chr2	+	5539	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	83	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	177.712472808438	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	582	False	NA	22	True	AATAAA	-33	NA	75662615	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697115_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.47	chr2	+	2411	12	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	85	5893	85	1148	5prime_fragment	FALSE	canonical	3	679	junction_7	50.2328462559629	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACATATTTACTTTATG	584	False	NA	NA	False	AATAAA	-38	NA	75662617	75719659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459
ES.19344.49	chr2	+	5488	19	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	85	-1702	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	182.060573626296	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGTGTGGAGCTGTTT	584	False	NA	20	True	AATAAA	-31	NA	75662617	75759992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.5	chr2	+	5685	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-19	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	178.020276475926	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	468	False	NA	22	True	AATAAA	-33	NA	75662501	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730603_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.50	chr2	+	4370	13	NNC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	85	-3461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	211.302491834705	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCTGCTATTAATTTA	584	False	NA	NA	False	ATTAAA	-24	NA	75662617	75722091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75718984
ES.19344.51	chr2	+	5684	21	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	86	-1703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	228.746775933564	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	585	False	NA	19	True	AATAAA	-30	NA	75662618	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75694652_75694779_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.53	chr2	+	4068	12	NNC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	86	2831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	219.376539574546	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAGAAAAAAAA	585	False	NA	NA	False	NA	NA	NA	75662618	75721342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697115_75697217_75698648_75698758_75707814_75707943_75718459
ES.19344.54	chr2	+	2501	14	FSM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	86	2	86	-2	multi-exon	FALSE	canonical	3	643	junction_12	57.9822458033696	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCCATGGTTGTTGTT	585	False	NA	NA	False	AATAAA	-19	NA	75662618	75725550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388
ES.19344.55	chr2	+	4153	13	NNC	ENSMUSG00000042410.17	novel	2589	14	NA	NA	86	2838	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	281.412656668696	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	585	False	NA	NA	False	NA	NA	NA	75662618	75721349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75671629_75671683_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459
ES.19344.56	chr2	+	7201	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	175.127923169563	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	585	False	NA	5	True	AATAAA	-17	NA	75662618	75761694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75740004_75740045_75741964_75742023_75756265
ES.19344.57	chr2	+	4735	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	86	-2520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.084498602936	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGTGTATATTATATCA	585	False	NA	8	True	AATAAA	-14	NA	75662618	75759174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683151_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.6	chr2	+	4695	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	2	2662	2	2540	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGGTTGTTACTCAAAA	489	False	NA	NA	False	AATAAA	-27	NA	75662522	75759032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.60	chr2	+	2557	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	99	4703	87	499	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACACTTTTGTCCTCCG	586	False	NA	NA	False	TATAAA	-14	NA	75662619	75756991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.61	chr2	+	5549	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	87	-1705	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.084498602936	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	586	False	NA	17	True	AATAAA	-28	NA	75662619	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684519_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.62	chr2	+	5174	15	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	90	-1703	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	196.016659017148	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	589	False	NA	19	True	AATAAA	-30	NA	75662622	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75756265
ES.19344.63	chr2	+	5717	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	105	-1700	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	279.644114947786	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	604	False	NA	22	True	AATAAA	-33	NA	75662637	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75663436_75663682_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.65	chr2	+	5319	19	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-58	-1700	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	182.391486426828	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	757	False	NA	22	True	AATAAA	-33	NA	75662790	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.66	chr2	+	5260	19	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-34	-1705	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	177.005693219452	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	781	False	NA	17	True	AATAAA	-28	NA	75662814	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75741964_75742023_75756265
ES.19344.67	chr2	+	5020	16	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	22353	1703	-13853	-1703	3prime_fragment	FALSE	canonical	3	643	junction_8	63.0895659624738	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	1668	False	NA	19	True	AATAAA	-30	NA	75684873	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.68	chr2	+	867	8	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-11366	-8	combination_of_known_splicesites	TRUE	canonical	3	3	junction_7	254.332579950917	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGTTGGTTTAAAA	4155	False	NA	NA	False	AATATA	-24	NA	75687360	75756484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75756265
ES.19344.69	chr2	+	4876	14	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	26721	1700	-9485	-1700	3prime_fragment	FALSE	canonical	3	643	junction_6	66.905037356455	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	6036	False	NA	22	True	AATAAA	-33	NA	75689241	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.7	chr2	+	7357	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	2	0	2	0	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	489	False	NA	5	True	AATAAA	-17	NA	75662522	75761694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.70	chr2	+	4845	14	NNC	ENSMUSG00000042410.17	novel	586	6	NA	NA	-7035	-1703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.805923339899	934	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	8486	False	NA	19	True	AATAAA	-30	NA	75691691	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75691745_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.71	chr2	+	3918	5	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	29186	4178	-7008	2863	internal_fragment	FALSE	canonical	3	681	junction_3	33.6860505254029	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAGAAAAAAACTTTATT	8513	False	NA	NA	False	NA	NA	NA	75691718	75721374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459
ES.19344.72	chr2	+	4793	13	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	29756	1703	-6450	-1703	3prime_fragment	FALSE	canonical	3	643	junction_5	67.4863669360133	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	9071	False	NA	19	True	AATAAA	-30	NA	75692276	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.73	chr2	+	1575	3	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	33867	17089	-2327	156	internal_fragment	FALSE	canonical	3	681	junction_2	34	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	75696399	75708463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75697217_75698648_75698758_75707814
ES.19344.74	chr2	+	4717	12	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	34567	1700	-1639	-1700	3prime_fragment	FALSE	canonical	3	643	junction_4	70.2567899133288	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	NA	False	NA	22	True	AATAAA	-33	NA	75697087	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.75	chr2	+	6417	12	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	34567	0	-1639	0	3prime_fragment	FALSE	canonical	3	643	junction_4	70.2567899133288	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	NA	False	NA	5	True	AATAAA	-17	NA	75697087	75761694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.76	chr2	+	4541	11	NNC	ENSMUSG00000042410.17	novel	586	6	NA	NA	925	-1702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.439672410623	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGTGTGGAGCTGTTT	359	False	NA	20	True	AATAAA	-31	NA	75705224	75759992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75705289_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.77	chr2	+	3660	10	ISM	ENSMUSG00000042410.17	ENSMUST00000175646.2	1839	20	44964	-2751	3513	-2521	3prime_fragment	FALSE	canonical	3	643	junction_2	74.9399759807808	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTGTGTATATTATATC	2947	False	NA	7	True	AATAAA	-13	NA	75707812	75759173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.78	chr2	+	4476	10	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	45292	1705	3513	-1705	3prime_fragment	FALSE	canonical	3	643	junction_2	74.9399759807808	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGAAGTGTGGAGCTG	2947	False	NA	17	True	AATAAA	-28	NA	75707812	75759989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.79	chr2	+	4442	1	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-7552	2831	mono-exon	FALSE	NA	NA	NA	NA	NA	790	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAGAAAAAAAA	1854	False	NA	NA	False	NA	NA	NA	75716900	75721342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75716900_75721300
ES.19344.8	chr2	+	5650	20	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	2	-1701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	177.685785101529	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGTGTGGAGCTGTTTT	489	False	NA	21	True	AATAAA	-32	NA	75662522	75759993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722207_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.80	chr2	+	5592	1	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	-4133	359	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCTAGTGAGAAAGGAT	5273	False	NA	NA	False	NA	NA	NA	75720319	75725911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75720300_75725900
ES.19344.81	chr2	+	4234	7	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	61853	1703	-79	-1703	3prime_fragment	FALSE	canonical	3	678	junction_2	66.0319787846936	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	3425	False	NA	19	True	AATAAA	-30	NA	75724373	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.82	chr2	+	3976	4	ISM	ENSMUSG00000042410.17	ENSMUST00000176973.2	586	6	10748	-3499	-4314	-1703	3prime_fragment	FALSE	canonical	3	805	junction_2	17.1334630345285	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGTGTGGAGCTGTT	5670	False	NA	19	True	AATAAA	-30	NA	75735200	75759991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75735293_75739944_75740045_75741964_75742023_75756265
ES.19344.83	chr2	+	3780	2	ISM	ENSMUSG00000042410.17	ENSMUST00000176973.2	586	6	17510	-3493	2448	-1709	3prime_fragment	FALSE	canonical	3	814	junction_1	0	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAAAGGAAGTGTGGA	NA	False	NA	13	True	AATAAA	-24	NA	75741962	75759985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_75742023_75756265
ES.19344.84	chr2	+	4071	1	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	16409	-1700	mono-exon	FALSE	NA	NA	NA	NA	NA	899	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	NA	False	NA	22	True	AATAAA	-33	NA	75755923	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_75755900_75760000
ES.19344.9	chr2	+	5352	21	NNC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	2	-1700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	173.634126829952	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	489	False	NA	22	True	AATAAA	-33	NA	75662522	75759994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265_75758503_75758807
ES.19345.1	chr2	-	3839	1	Intergenic	novelGene_16052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGTCTTACCTATTAC	8797	False	NA	NA	False	NA	NA	NA	75668788	75664949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75664900_75668800
ES.19346.1	chr2	-	158	1	Intergenic	novelGene_16053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAAAATTTTTTT	6990	False	NA	NA	False	NA	NA	NA	75678523	75678365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75678400_75678500
ES.19347.1	chr2	-	182	1	Intergenic	novelGene_16054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATAGGGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	75693564	75693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75693400_75693600
ES.19348.1	chr2	-	2294	1	Antisense	novelGene_ENSMUSG00000042410.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCTCAAAGGCCTCACA	8456	False	NA	NA	False	NA	NA	NA	75704573	75702279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_75702300_75704600
ES.19349.1	chr2	-	3366	1	Antisense	novelGene_ENSMUSG00000042410.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	75734407	75731041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_75731000_75734400
ES.1935.1	chr1	+	2586	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-84	5052	-84	-5052	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGAGCCTGTCTGTGTTG	5366	False	NA	33	True	AATAAA	-24	NA	172204028	172206614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204000_172206600
ES.1935.10	chr1	+	3542	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	40	3972	40	-3972	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTCTCCAGCCTGC	5490	False	NA	NA	False	AAAACA	-11	NA	172204152	172207694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204200_172207700
ES.1935.2	chr1	+	7110	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-20	464	-20	-464	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTCTGTTTTGTTTTTT	5430	False	NA	NA	False	ATTAAA	-29	NA	172204092	172211202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172211200
ES.1935.3	chr1	+	5260	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-18	2312	-18	-2312	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTGTAATTCTCT	5432	False	NA	NA	False	NA	NA	NA	172204094	172209354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172209400
ES.1935.4	chr1	+	7539	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-8	23	-8	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGGTCTTTATATC	5442	False	NA	129	True	AAGAAA	-17	NA	172204104	172211643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172211600
ES.1935.5	chr1	+	2050	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	-7	5511	-7	-5511	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACCTGAGTTTAAGAAAA	5443	False	NA	NA	False	ATTAAA	-18	NA	172204105	172206155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172206200
ES.1935.6	chr1	+	6253	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	7	1294	7	-1294	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAAGTGTCCTTTTTTCTCC	5457	False	NA	27	True	AATAAA	-17	NA	172204119	172210372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172210400
ES.1935.7	chr1	+	7410	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	7	137	7	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATATTGTTCTTTTTT	5457	False	NA	15	True	TATAAA	-22	NA	172204119	172211529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172211500
ES.1935.9	chr1	+	3300	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	18	4236	18	-4236	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGGACTTTGTTTTTT	5468	False	NA	NA	False	AGTAAA	-29	NA	172204130	172207430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172204100_172207400
ES.19350.1	chr2	-	2595	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	142	0	142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCGGTGTTTAGCGCC	NA	False	NA	NA	False	NA	NA	NA	75768787	75766192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75766200_75768800
ES.19350.2	chr2	-	2242	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	165	330	165	-330	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTCTCCATTTTTGTT	NA	False	NA	NA	False	TTTAAA	-25	NA	75768764	75766522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75766500_75768800
ES.19351.1	chr2	-	1550	1	FSM	ENSMUSG00000075272.5	ENSMUST00000099995.5	2431	1	881	0	881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTGAGGCTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	75807633	75806083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75806100_75807600
ES.19352.1	chr2	-	2870	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	-7	858	-7	-858	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGACCTTTTGTAGTG	NA	False	NA	1	True	AATAAA	-32	NA	75812318	75809448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_75809400_75812300
ES.19353.1	chr2	-	4726	1	Genic_Genomic	ENSMUSG00000075270.12	novel	NA	NA	NA	NA	15048	2871	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTGTGTTCTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	75821339	75816613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_75816600_75821300
ES.19353.2	chr2	-	4366	10	ISM	ENSMUSG00000075270.12	ENSMUST00000099992.10	4189	20	262775	-2216	-69956	1445	3prime_fragment	TRUE	canonical	0	0	junction_1	0.666666666666667	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAGCCTGAGAGCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	75906343	75818039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_75821632_75848179_75848264_75853054_75853130_75859620_75859685_75861267_75861346_75877122_75877224_75880483_75880575_75889319_75889430_75905696_75905805_75906280
ES.19353.3	chr2	-	5059	22	NNC	ENSMUSG00000075270.12	novel	4189	20	NA	NA	-168	-174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.499432784842929	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGCAGAACCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	76169286	75819658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_75821632_75839783_75839856_75848179_75848264_75853054_75853130_75859620_75859685_75861267_75861346_75877122_75877224_75880483_75880575_75889319_75889430_75905696_75905805_75906280_75906428_75943847_75943899_75966710_75966804_75967682_75967751_75970178_75970255_75977384_75977418_75988639_75988773_76025232_76025298_76041366_76041508_76045661_76045752_76121508_76121668_76168039
ES.19353.4	chr2	-	172	1	Intergenic	novelGene_16055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	75846240	75846068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_75846100_75846200
ES.19353.5	chr2	-	4416	15	ISM	ENSMUSG00000075270.12	ENSMUST00000099992.10	4189	20	-126	55089	-126	-17336	5prime_fragment	FALSE	canonical	0	0	junction_2	0.589015089373952	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCTGAGTTTAAATTTC	NA	False	NA	NA	False	AGTAAA	-15	NA	76169244	75875344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_75877224_75880483_75880575_75889319_75889430_75905696_75905805_75906280_75906428_75943847_75943899_75966710_75966804_75967682_75967751_75970178_75970255_75988639_75988773_76025232_76025298_76041366_76041508_76045661_76045752_76121508_76121668_76168039
ES.19354.1	chr2	+	175	1	Intergenic	novelGene_16056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGAATCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76196482	76196657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_76196500_76196700
ES.19355.1	chr2	-	4677	2	ISM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	-11	0	-11	0	intron_retention	FALSE	canonical	3	234	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190805	76184285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76184581_76186423
ES.19355.2	chr2	-	635	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGCGTTATGTTTATG	NA	False	NA	0	True	AATAAA	-29	NA	76190804	76184286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76184581_76186423_76186617_76190656
ES.19355.3	chr2	-	664	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	-10	1	-10	-1	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGCGTTATGTTTATG	NA	False	NA	0	True	AATAAA	-29	NA	76190804	76184286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
ES.19355.4	chr2	-	894	6	NNC	ENSMUSG00000056436.5	novel	655	4	NA	NA	-8557	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.9956700064493	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCCACTCGTGCGTTA	NA	False	NA	-8	True	AATAAA	-21	NA	76199351	76184294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76184581_76186423_76186617_76187916_76187946_76192598_76192683_76198275_76198455_76199228
ES.19355.5	chr2	-	3332	3	ISM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	23	11	23	-11	intron_retention	FALSE	canonical	3	146	junction_2	44	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTCCACTCGTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	76190771	76184296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76184581_76186423_76186617_76187916
ES.19356.1	chr2	+	1934	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	-38	2	-38	-2	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGACTTATTTATATG	NA	False	NA	53	True	AATAAA	-19	NA	76200289	76214110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ES.19356.10	chr2	+	2366	10	NNC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	62	5792	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	106.437717254369	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGTTTACAGTCTTA	NA	False	NA	NA	False	AATAAA	-29	NA	76200389	76219904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76219060
ES.19356.11	chr2	+	1804	10	NNC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	403	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.251910789528	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	52	True	AATAAA	-18	NA	76200730	76214109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76201085_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ES.19356.12	chr2	+	5007	4	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	5456	-8	intron_retention	FALSE	canonical	3	329	junction_2	11.5181016954473	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAAATCATGACTTATT	NA	False	NA	47	True	AATAAA	-13	NA	76205783	76214104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76206849_76208724_76209107_76209261_76209426_76210708
ES.19356.2	chr2	+	4809	9	NNC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	111.271065421339	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200328	76214112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76200773_76202378_76202502_76203880_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
ES.19356.3	chr2	+	1931	8	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	5	junction_3	123.158931665469	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	52	True	AATAAA	-18	NA	76200335	76214109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76203903_76204031_76206662_76206849_76208724_76209107_76209261_76209426_76210708_76210910_76213798
ES.19356.4	chr2	+	4777	9	ISM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	10	0	10	0	intron_retention	FALSE	canonical	3	321	junction_1	18.2054250156375	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200337	76214112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
ES.19356.5	chr2	+	1714	9	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	10	-51	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	115.397072644847	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTTGTCATGTATG	NA	False	NA	4	True	AATAAA	-12	NA	76200337	76214061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76203903_76204031_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ES.19356.6	chr2	+	4933	8	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	17	-4	intron_retention	FALSE	canonical	3	321	junction_1	18.1715184184661	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCATGACTTATTTATA	NA	False	NA	51	True	AATAAA	-17	NA	76200344	76214108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76209107_76209261_76209426_76210708
ES.19356.7	chr2	+	6239	5	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	23	-3	intron_retention	FALSE	canonical	1	5	junction_2	143.971134259615	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	52	True	AATAAA	-18	NA	76200350	76214109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76205699_76205823_76206662_76206849_76208724
ES.19356.8	chr2	+	4614	8	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	46	-4	intron_retention	FALSE	canonical	3	5	junction_3	118.761293770147	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCATGACTTATTTATA	NA	False	NA	51	True	AATAAA	-17	NA	76200373	76214108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76203903_76204031_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
ES.19356.9	chr2	+	4603	8	NIC	ENSMUSG00000042369.9	novel	1898	10	NA	NA	54	-3	intron_retention	FALSE	canonical	1	5	junction_2	116.615362869319	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGACTTATTTATAT	NA	False	NA	52	True	AATAAA	-18	NA	76200381	76214109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76200773_76202378_76202502_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708
ES.19357.1	chr2	-	205	1	Intergenic	novelGene_16057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8105	False	NA	NA	False	NA	NA	NA	76207279	76207074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76207100_76207300
ES.19358.1	chr2	-	376	1	Intergenic	novelGene_16058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	76217747	76217371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76217400_76217700
ES.19359.1	chr2	-	574	3	Intergenic	novelGene_16059	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGCATGCTGGCCATC	9651	False	NA	NA	False	ATTAAA	-17	NA	76230483	76228707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76228872_76229750_76229952_76230274
ES.1936.1	chr1	-	3903	1	Antisense	novelGene_ENSMUSG00000050229.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATCTTCTCTTGAACTT	9826	False	NA	NA	False	NA	NA	NA	172210641	172206738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_172206700_172210600
ES.19360.1	chr2	+	3392	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	-13	9	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	10.767427733679	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTACGCGTGGTTTCTGG	NA	False	NA	15	True	AATAAA	-26	NA	76236838	76426398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.10	chr2	+	3876	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-43	20	7	-20	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATAGGTGTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	76236858	76426920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.11	chr2	+	3364	25	NNC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	13.9058715616422	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCTTATAGCTACGC	NA	False	NA	4	True	AATAAA	-15	NA	76236858	76426387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422106_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.12	chr2	+	3544	27	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.4368139709957	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCTTATAGCTACGC	NA	False	NA	4	True	AATAAA	-15	NA	76236858	76426387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414389_76414498_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.13	chr2	+	3008	23	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	12.8378314896003	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTCTTATAGCTA	NA	False	NA	1	True	AATAAA	-12	NA	76236859	76426384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.14	chr2	+	2428	18	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.4695817163073	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGATGTTCTCAGAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	76236860	76410374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
ES.19360.15	chr2	+	3520	27	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.1117748246854	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236860	76426388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.16	chr2	+	2168	15	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.1925533794512	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTCTTATAGCTA	NA	False	NA	1	True	AATAAA	-12	NA	76236863	76426384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.17	chr2	+	2353	17	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	12	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2259796528383	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGTTCTCAGAGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	76236863	76410377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
ES.19360.18	chr2	+	3866	25	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	12	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.7718176681891	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGCTCATAGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	76236863	76426915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409555_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.19	chr2	+	3356	25	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	13	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.9058715616422	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACGCGTGGTTTCTGGG	NA	False	NA	16	True	AATAAA	-27	NA	76236864	76426399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382584_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.2	chr2	+	3354	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	-53	552	-3	-1	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236848	76426388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.20	chr2	+	7016	27	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	14	-1085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.0548902816209	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGTGCTCTAGAAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	76236865	76429902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76366639_76366712_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.21	chr2	+	2241	17	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	-15	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.8676782483587	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCAAACCAACAGTAACT	NA	False	NA	NA	False	AAAAAG	-30	NA	76236866	76409903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76409757
ES.19360.22	chr2	+	3863	28	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.1887020503212	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCTTATAGCTACG	NA	False	NA	3	True	AATAAA	-14	NA	76236867	76426386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76373848_76373916_76375871_76376242_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.23	chr2	+	529	3	NNC	ENSMUSG00000042359.19	novel	593	2	NA	NA	-7	422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTCTTGGTTTTGTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	76236874	76238697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76238412
ES.19360.24	chr2	+	3616	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	13.4647899021021	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGAGTGCTGGCGTG	NA	False	NA	NA	False	AATAAA	-35	NA	76236882	76426940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.25	chr2	+	2226	16	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	13.7242688532233	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACGATGTTCTCAGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	76236883	76410373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
ES.19360.26	chr2	+	3154	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	11.6687498140213	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCTTATAGCTACG	NA	False	NA	3	True	AATAAA	-14	NA	76236883	76426386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.27	chr2	+	3483	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	150	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	10.767427733679	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	76236888	76426539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.28	chr2	+	3377	26	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.2283702200806	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCTTATAGCTACGC	NA	False	NA	4	True	AATAAA	-15	NA	76236888	76426387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409555_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.29	chr2	+	3416	26	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5931490775638	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236889	76426388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.3	chr2	+	936	2	FSM	ENSMUSG00000042359.19	ENSMUST00000134213.2	422	2	-56	-458	-3	-6	multi-exon	FALSE	canonical	3	7	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCAACTTTGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	76236848	76238269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76237034_76237518
ES.19360.30	chr2	+	3234	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTACGCGTGGTTTCT	NA	False	NA	13	True	AATAAA	-24	NA	76236901	76426396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.31	chr2	+	4157	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	-7	intron_retention	FALSE	canonical	3	22	junction_10	8.31069842632575	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTATGTTTCTTATAGC	NA	False	NA	-1	True	AATAAA	-10	NA	76236904	76426382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.32	chr2	+	6903	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	-1087	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGTGCTCTAGAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	76236904	76429900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.33	chr2	+	3865	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	10.767427733679	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACAGAGTGCTGGCG	NA	False	NA	NA	False	AATAAA	-33	NA	76236905	76426938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.34	chr2	+	3381	26	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.6205335059977	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCTTATAGCTACGC	NA	False	NA	4	True	AATAAA	-15	NA	76236905	76426387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.35	chr2	+	2265	17	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5472369909914	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGATGTTCTCAGAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	76236909	76410374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76237864_76237950_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409555_76409655_76410132
ES.19360.36	chr2	+	3787	25	NNC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	5	-19	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	13.5274925819812	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCATAGGTGTATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	76236909	76426921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409555_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.37	chr2	+	1301	2	FSM	ENSMUSG00000042359.19	ENSMUST00000134213.2	422	2	7	-886	7	422	multi-exon	FALSE	canonical	3	7	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTCTTGGTTTTGTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	76236911	76238697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76237034_76237518
ES.19360.38	chr2	+	313	1	Intergenic	novelGene_16060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGAAGACACTTCATT	NA	False	NA	NA	False	NA	NA	NA	76250550	76250863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_76250600_76250900
ES.19360.39	chr2	+	234	1	Intergenic	novelGene_16061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTTAGTTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	76255885	76256119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_76255900_76256100
ES.19360.4	chr2	+	3447	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236848	76426388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.40	chr2	+	175	1	Intergenic	novelGene_16062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAGTAATTGAGAC	NA	False	NA	NA	False	NA	NA	NA	76338377	76338552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_76338400_76338600
ES.19360.41	chr2	+	6193	22	ISM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	133615	-2963	-8167	-1084	3prime_fragment	FALSE	canonical	2	5	junction_7	10.7078287421812	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGCTCTAGAAATGT	166	False	NA	NA	False	ATTAAA	-14	NA	76370516	76429903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.42	chr2	+	2471	1	ISM	ENSMUSG00000042359.19	ENSMUST00000077972.11	8037	27	191402	233	29820	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGGAATCCTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	76428283	76430754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76428300_76430800
ES.19360.5	chr2	+	3809	24	NIC	ENSMUSG00000042359.19	novel	3853	25	NA	NA	-3	-22	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCATAGGTGTATG	NA	False	NA	NA	False	AATAAA	-13	NA	76236848	76426918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.6	chr2	+	2348	17	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	10.9784946030865	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATGTTCTCAGAGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	76236856	76410375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
ES.19360.7	chr2	+	3885	25	NNC	ENSMUSG00000042359.19	novel	8257	27	NA	NA	6	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17.1747553759063	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTGCTCATAGGTG	NA	False	NA	NA	False	AATAAA	-9	NA	76236857	76426914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76344413_76344501_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415616_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.8	chr2	+	3807	27	NNC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.043729254046	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCTTATAGCTACGCG	NA	False	NA	5	True	AATAAA	-16	NA	76236858	76426388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76375871_76376242_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19360.9	chr2	+	3970	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	7	-19	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCATAGGTGTATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	76236858	76426921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ES.19361.1	chr2	-	4042	10	Antisense	novelGene_ENSMUSG00000042359.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCTGAGTGTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	76428795	76414503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_76414893_76415359_76415613_76416456_76416593_76417055_76417121_76418893_76418975_76420657_76420801_76422125_76422269_76423679_76423809_76425105_76425229_76426215
ES.19361.2	chr2	-	174	1	Intergenic	novelGene_16063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	76421242	76421068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76421100_76421200
ES.19362.1	chr2	-	176	1	Intergenic	novelGene_16064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCAATGCATA	NA	False	NA	NA	False	NA	NA	NA	76441971	76441795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76441800_76442000
ES.19363.1	chr2	-	3729	2	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	11391	34	4109	-34	3prime_fragment	FALSE	canonical	3	32	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCTCATTTTATTACA	NA	False	NA	1	True	NA	NA	NA	76466968	76460275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76460913_76463876
ES.19363.2	chr2	-	1580	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	-1	35	-1	-35	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGCTCATTTTATTAC	NA	False	NA	0	True	NA	NA	NA	76478360	76460276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ES.19363.4	chr2	-	4331	7	NNC	ENSMUSG00000002731.7	novel	1614	8	NA	NA	21	-41	intron_retention	FALSE	canonical	1	3	junction_5	16.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGAGCTCTGCTCATTT	NA	False	NA	-6	True	NA	NA	NA	76478338	76460282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76473649_76477592_76477639_76478135
ES.19363.5	chr2	-	4623	4	NIC	ENSMUSG00000002731.7	novel	1614	8	NA	NA	19	48	intron_retention	FALSE	canonical	3	42	junction_2	3.85861230093008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGTCCCTTCATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	76478340	76467090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76467234_76469543_76473649_76477468_76477639_76478135
ES.19363.6	chr2	-	808	6	ISM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	5	6852	5	45	5prime_fragment	FALSE	canonical	3	42	junction_4	3.65513337649941	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGATGTCCCTTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	76478354	76467093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ES.19364.1	chr2	-	4082	1	NIC	ENSMUSG00000002732.15	novel	860	4	NA	NA	-1885	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTTTTGCAAATCTG	NA	False	NA	-16	True	AATAAA	-23	NA	76497472	76493390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76493400_76497500
ES.19364.2	chr2	-	862	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	-5	3	-5	-3	multi-exon	FALSE	canonical	3	16	junction_2	10.2089285540757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTTTTGCAAATCTG	NA	False	NA	-16	True	AATAAA	-23	NA	76503419	76493390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ES.19365.1	chr2	+	2638	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-104	0	-104	0	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTTTGTTTATTG	6402	False	NA	6	True	ATTAAA	-19	NA	76505520	76527172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.10	chr2	+	986	5	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	0	9325	0	-5261	5prime_fragment	FALSE	canonical	3	231	junction_3	16.2230545829076	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTGTTCGTGTGTA	6506	False	NA	3	True	ATTAAA	-3	NA	76505624	76517847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625
ES.19365.11	chr2	+	6901	8	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	1	-254	intron_retention	FALSE	canonical	0	0	junction_5	110.137205710117	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTAGTGCCTGTTGT	6507	False	NA	1	True	ATTAAA	-14	NA	76505625	76526918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522170_76522265_76522992_76523109_76525727
ES.19365.12	chr2	+	1411	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	18	1105	18	-1105	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTGAAGTGTATTTT	6524	False	NA	NA	False	NA	NA	NA	76505642	76526067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.13	chr2	+	2201	8	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	21	-253	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	85.5636772067614	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGTGCCTGTTGTA	6527	False	NA	2	True	ATTAAA	-15	NA	76505645	76526919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510565_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.14	chr2	+	2231	8	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	22	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	82.8879253164495	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6528	False	NA	3	True	ATTAAA	-16	NA	76505646	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517654_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.15	chr2	+	3323	11	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	22	57477	intron_retention	FALSE	canonical	0	0	junction_7	119.825915393958	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAAGGCGGTTTAATT	6528	False	NA	NA	False	AATAAA	-13	NA	76505646	76584649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76529074_76529141_76581159_76582424_76583646_76583717_76583793
ES.19365.16	chr2	+	2463	8	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.7264740030272	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTTTATTTTGTTTAT	6533	False	NA	4	True	ATTAAA	-17	NA	76505651	76527170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513115_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.17	chr2	+	5143	7	NIC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	58	507	intron_retention	FALSE	canonical	3	204	junction_6	23.5937844922485	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCCCCTCTCCATAG	6564	False	NA	NA	False	AATAAA	-22	NA	76505682	76527679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76523109_76525727
ES.19365.18	chr2	+	2396	9	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	58	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.25419655822	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6564	False	NA	3	True	ATTAAA	-16	NA	76505682	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76509884_76510057_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.19	chr2	+	2475	9	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	194	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.239117089705	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTATTTTGTTTATT	6700	False	NA	5	True	ATTAAA	-18	NA	76505818	76527171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76523222_76523359_76525727
ES.19365.2	chr2	+	3133	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-100	-499	-100	499	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCATTCTGCCCCCT	6406	False	NA	NA	False	AATAAA	-14	NA	76505524	76527671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.20	chr2	+	1863	7	NIC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	263	-252	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	88.9756521002609	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6769	False	NA	3	True	ATTAAA	-16	NA	76505887	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76505979_76510506_76510624_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.21	chr2	+	4594	7	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	1359	1109	1359	-1109	3prime_fragment	FALSE	canonical	3	204	junction_6	24.6418794377016	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACTTTTGAAGTGTA	7865	False	NA	NA	False	NA	NA	NA	76506983	76526063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.22	chr2	+	3109	4	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	2421	9309	2421	-5245	internal_fragment	FALSE	canonical	3	231	junction_2	17.9071680247511	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTGTGTG	8927	False	NA	19	True	ATTAAA	-19	NA	76508045	76517863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625
ES.19365.23	chr2	+	2893	7	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	4169	0	4169	0	3prime_fragment	FALSE	canonical	3	204	junction_6	24.6418794377016	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTTTGTTTATTG	NA	False	NA	6	True	ATTAAA	-19	NA	76509793	76527172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.24	chr2	+	3748	3	ISM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	12769	252	-1803	-252	3prime_fragment	FALSE	canonical	3	204	junction_2	7.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	NA	False	NA	3	True	ATTAAA	-16	NA	76518393	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_76520833_76522992_76523109_76525727
ES.19365.3	chr2	+	6892	7	NIC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	-82	-252	intron_retention	FALSE	canonical	3	204	junction_6	24.6418794377016	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6424	False	NA	3	True	ATTAAA	-16	NA	76505542	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.4	chr2	+	3412	1	Genic_Genomic	ENSMUSG00000002733.9	novel	NA	NA	NA	NA	-67	-14139	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTTTTAAAAAG	6439	False	NA	NA	False	NA	NA	NA	76505557	76508969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_76505600_76509000
ES.19365.5	chr2	+	2459	9	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	-18	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.239117089705	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6488	False	NA	3	True	ATTAAA	-16	NA	76505606	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76523222_76523382_76525727
ES.19365.6	chr2	+	2299	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	-12	247	-12	-247	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTGTTGTATCTATC	6494	False	NA	8	True	ATTAAA	-21	NA	76505612	76526925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.7	chr2	+	9267	6	NIC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	-7	-252	intron_retention	FALSE	canonical	3	204	junction_5	22.8508205541945	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTAGTGCCTGTTGTAT	6499	False	NA	3	True	ATTAAA	-16	NA	76505617	76526920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ES.19365.9	chr2	+	2519	10	NNC	ENSMUSG00000002733.9	novel	2534	8	NA	NA	-5	-250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.516180776367	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAGTGCCTGTTGTATCT	6501	False	NA	5	True	ATTAAA	-18	NA	76505619	76526922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522170_76522265_76522992_76523109_76523222_76523359_76525727
ES.19366.1	chr2	-	3845	1	Intergenic	novelGene_16065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAAATCAAATGCACAC	NA	False	NA	NA	False	AATATA	-25	NA	76510129	76506284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76506300_76510100
ES.19367.1	chr2	-	10716	12	ISM	ENSMUSG00000051747.16	ENSMUST00000011934.13	81999	191	264632	0	108719	0	3prime_fragment	FALSE	canonical	0	0	junction_11	2.28903242036621	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTGGTTGTTTTCT	NA	False	NA	4	True	AATAAA	-23	NA	76548167	76534323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76535674_76536013_76536317_76536783_76536938_76537040_76537733_76538502_76538660_76538791_76544557_76544672_76545267_76545487_76545794_76545883_76546460_76547092_76547393_76547516_76547823_76547954
ES.19367.2	chr2	-	8305	5	NIC	ENSMUSG00000051747.16	novel	101674	313	NA	NA	112782	0	intron_retention	FALSE	canonical	1	3	junction_2	2.04633819296811	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGGTTGGTTGTT	NA	False	NA	0	True	AATAAA	-19	NA	76544104	76534327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76536317_76536783_76536938_76537040_76537733_76538502_76538660_76538791
ES.19368.1	chr2	-	156	1	Intergenic	novelGene_16066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4467	False	NA	NA	False	NA	NA	NA	76668616	76668460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76668500_76668600
ES.19369.1	chr2	+	2258	1	Antisense	novelGene_ENSMUSG00000051747.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATGCCTATAATCTAA	NA	False	NA	NA	False	AATAAA	-14	NA	76710114	76712372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_76710100_76712400
ES.1937.1	chr1	-	1418	2	Genic_Genomic	ENSMUSG00000102278.2	novel	2756	1	NA	NA	4	23	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAACATGACCTT	1915	False	NA	NA	False	ATTAAA	-37	NA	172218552	172215777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_172217087_172218443
ES.19370.1	chr2	-	162	1	Intergenic	novelGene_16067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTTAAAAGCCAGATTG	8115	False	NA	NA	False	NA	NA	NA	76722344	76722182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76722200_76722300
ES.19371.1	chr2	-	6316	24	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	8.50175118178013	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGGACCTCAATCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	77000963	76840245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958573_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.11	chr2	-	6005	22	NIC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	8.31221814689328	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTGAGGACCTCAATC	NA	False	NA	NA	False	ATTAAA	-17	NA	77000960	76840248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.12	chr2	-	6307	24	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	1169	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.13264327131406	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATCCTGAGGACCTCAA	NA	False	NA	NA	False	ATTAAA	-15	NA	76999751	76840250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_76999521
ES.19371.13	chr2	-	5960	24	FSM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	19	243	2	-243	multi-exon	FALSE	canonical	3	17	junction_12	5.82219207901242	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAGAGAGGTGT	NA	False	NA	NA	False	NA	NA	NA	77000942	76840581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.15	chr2	-	6648	8	NIC	ENSMUSG00000044033.17	novel	8969	23	NA	NA	1586	-1601	intron_retention	FALSE	canonical	3	23	junction_6	4.89064079103534	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTGAGGTGTTTC	5	True	NA	NA	False	ATTAAA	-22	NA	76872838	76843491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76845592_76850256_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786
ES.19371.16	chr2	-	5788	24	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	-2948	-1604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.46788662948166	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTGTCTGAGGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	77003928	76843494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728_77000952_77003832
ES.19371.18	chr2	-	2644	5	NNC	ENSMUSG00000044033.17	novel	8969	23	NA	NA	1228	-1652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.5738719604982	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAACAGTTATTTATTT	8688	False	NA	NA	False	AATAAA	-17	NA	76859766	76843542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76845586_76850256_76850374_76853789_76853903_76857935_76858120_76859579
ES.19371.19	chr2	-	6620	21	NNC	ENSMUSG00000044033.17	novel	8969	23	NA	NA	37622	-1652	intron_retention	FALSE	canonical	0	0	junction_20	8.45635855436606	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAACAGTTATTTATTT	6633	False	NA	NA	False	AATAAA	-17	NA	76963298	76843542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76962796
ES.19371.2	chr2	-	5278	1	ISM	ENSMUSG00000044033.17	ENSMUST00000049544.14	8969	23	155455	1	4737	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	8903	False	NA	NA	False	ATTAAA	-19	NA	76845524	76840246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76840200_76845500
ES.19371.20	chr2	-	5411	21	NIC	ENSMUSG00000044033.17	novel	8969	23	NA	NA	-45	-1653	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	8.45147916047836	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAACAGTTATTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	77001025	76843543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.22	chr2	-	3254	12	ISM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	110942	16316	-14945	-2924	internal_fragment	FALSE	canonical	3	17	junction_8	5.65831502530743	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATTGAAAATAAGGATTC	4717	False	NA	NA	False	AATAAA	-17	NA	76890019	76856654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883
ES.19371.23	chr2	-	1999	12	NNC	ENSMUSG00000044033.17	novel	8969	23	NA	NA	-8	-4605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	10.9128781304892	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAACATTAAGAAGCCA	NA	False	NA	-11	True	AATAAA	-8	NA	77000928	76879919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958573_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.24	chr2	-	3242	9	NNC	ENSMUSG00000044033.17	novel	1464	8	NA	NA	-45	10684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1030729568982	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCATGTGTTGTATATT	NA	False	NA	NA	False	ATTAAA	-23	NA	77001025	76894420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76896203_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.25	chr2	-	1468	8	FSM	ENSMUSG00000044033.17	ENSMUST00000131660.3	1464	8	3	-7	3	7	multi-exon	FALSE	canonical	3	25	junction_3	5.99659767480439	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCGCGAAGGCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	77000951	76905097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.26	chr2	-	4647	2	NNC	ENSMUSG00000044033.17	novel	1464	8	NA	NA	-35311	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	76910385	76905115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76906181_76906803
ES.19371.27	chr2	-	180	1	Intergenic	novelGene_16068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGAGGGC	6551	False	NA	NA	False	NA	NA	NA	76931857	76931677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76931700_76931900
ES.19371.28	chr2	-	2031	7	NNC	ENSMUSG00000044033.17	novel	658	4	NA	NA	3	-27005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0639452948436	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTCTTAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	77000951	76932109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76933123_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.29	chr2	-	5943	1	Intergenic	novelGene_16069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	76984994	76979051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_76979100_76985000
ES.19371.3	chr2	-	5614	25	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.33499983336666	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	77000959	76840246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76841319_76842016_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.4	chr2	-	6939	22	NIC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_16	8.46628634852066	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	77000961	76840246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.5	chr2	-	5820	24	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.46788662948166	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	77000957	76840246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76845227_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.6	chr2	-	7089	25	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	11.2908978828081	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGACCTCAATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	77000971	76840246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875731_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76995410_76995575_76998854_76998978_77000728
ES.19371.7	chr2	-	6104	23	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.89625941521457	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGAGGACCTCAATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	77000951	76840247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880099_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ES.19371.9	chr2	-	6239	24	NNC	ENSMUSG00000044033.17	novel	6222	24	NA	NA	200	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.13264327131406	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTGAGGACCTCAATC	NA	False	NA	NA	False	ATTAAA	-17	NA	77000720	76840248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000560
ES.19372.1	chr2	-	9101	18	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-171	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.1988765959183	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTACTCATTACTGGTC	NA	False	NA	-6	True	AATAAA	-23	NA	77111107	77010679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042712_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.10	chr2	-	3339	17	NIC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-192	518	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	30.1825177047906	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACATTGTGTTAATTTT	NA	False	NA	NA	False	TATAAA	-11	NA	77111128	77016380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77071956_77072066_77075360_77075431_77110898
ES.19372.11	chr2	-	3701	20	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-239	480	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	39.8622281102913	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77111175	77016418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77076516_77076689_77096019_77096110_77110898
ES.19372.12	chr2	-	3524	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-234	480	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77111170	77016418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.14	chr2	-	3575	19	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-235	480	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	35.8255805566668	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77111171	77016418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77076516_77076657_77110898
ES.19372.15	chr2	-	3402	18	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-192	478	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	28.8876837059705	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTTTATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	77111128	77016420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071944_77072066_77075360_77075431_77110898
ES.19372.16	chr2	-	7594	17	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-181	477	intron_retention	FALSE	canonical	0	0	junction_9	29.5378464854837	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTATGTTTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	77111117	77016421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042890_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.17	chr2	-	3321	17	NIC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-233	477	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	29.4739689175041	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTATGTTTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	77111169	77016421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77075360_77075431_77110898
ES.19372.18	chr2	-	3512	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-213	477	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	39.7782821197078	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTATGTTTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	77111149	77016421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071944_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.19	chr2	-	3440	19	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-197	477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.8796842599162	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTATGTTTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	77111133	77016421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77023106_77023153_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.2	chr2	-	9163	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-229	-6214	-229	-1	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGAATTTACTCATTAC	NA	False	NA	-11	True	AATAAA	-18	NA	77111165	77010684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.20	chr2	-	3286	17	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-147	477	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	38.4495915940599	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTATGTTTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	77111083	77016421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071944_77072066_77110898
ES.19372.22	chr2	-	3324	17	NIC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-198	476	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	29.1117861655722	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCTTTTATGTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	77111134	77016422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77110898
ES.19372.23	chr2	-	3384	18	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-231	476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	29.2610254853918	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCTTTTATGTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	77111167	77016422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047350_77048460_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.25	chr2	-	2357	12	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	48747	6043	-17594	172	3prime_fragment	FALSE	canonical	3	90	junction_7	12.5177559840425	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTGAAGAATAATTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	77047365	77016726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266
ES.19372.26	chr2	-	3044	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-224	10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTAGTTACGTCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	77111160	77016888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.27	chr2	-	2960	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-231	-9	-231	9	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGGTAGTTACGTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	77111167	77016889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.29	chr2	-	3683	5	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	5466	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.9843728195646	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTGGTAGTTACGT	NA	False	NA	NA	False	AATAAA	-20	NA	77024305	77016892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77018676_77018843_77018966_77021304_77021497_77022042_77022166_77022842
ES.19372.3	chr2	-	9246	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-225	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGGGGAATTTACTCAT	NA	False	NA	-14	True	AATAAA	-15	NA	77111161	77010687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.30	chr2	-	6655	10	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-4857	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	50.4909232766973	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTGGTAGTTACGT	NA	False	NA	NA	False	AATAAA	-20	NA	77034628	77016892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77030939_77031019_77033169_77033357
ES.19372.33	chr2	-	2779	18	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-34	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	35.8452073886254	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAATTTGGTAGTTACG	NA	False	NA	NA	False	AATAAA	-19	NA	77110970	77016893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77096019_77096110_77110898
ES.19372.34	chr2	-	4075	18	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-192	5	intron_retention	FALSE	canonical	3	14	junction_17	33.3774678985959	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAATTTGGTAGTTACG	NA	False	NA	NA	False	AATAAA	-19	NA	77111128	77016893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.35	chr2	-	2808	17	NIC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-192	5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	29.4739689175041	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAATTTGGTAGTTACG	NA	False	NA	NA	False	AATAAA	-19	NA	77111128	77016893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77075360_77075431_77110898
ES.19372.37	chr2	-	5318	9	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-3338	-19	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	41.1696186525938	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATCTTCTTTAAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	77033109	77016917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77030933_77030995
ES.19372.38	chr2	-	2550	17	NNC	ENSMUSG00000042272.18	novel	1890	12	NA	NA	-192	-2869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.4735050511472	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAAGTTGGTGTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	77111128	77019767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77020234_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.39	chr2	-	2127	13	ISM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-190	9826	-190	504	5prime_fragment	FALSE	canonical	3	86	junction_12	11.1439445440113	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTATGCAGTATATC	NA	False	NA	NA	False	AATAAA	-15	NA	77111126	77026724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.40	chr2	-	2493	8	ISM	ENSMUSG00000042272.18	ENSMUST00000139021.2	1890	12	-151	16520	-148	-16520	5prime_fragment	FALSE	canonical	3	86	junction_7	9.20292766194652	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAAAACCACCTTT	NA	False	NA	NA	False	TTTAAA	-5	NA	77111084	77043750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.5	chr2	-	9038	18	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-183	-92	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	28.8876837059705	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGGCAGCAGATTTTC	NA	False	NA	-102	True	AATAAA	-12	NA	77111119	77010775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071944_77072066_77075360_77075431_77110898
ES.19372.6	chr2	-	9218	20	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-192	-98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.4473606307058	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAAGGGCAGCAG	NA	False	NA	-108	True	AATAAA	-6	NA	77111128	77010781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77035962_77036062_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.7	chr2	-	3468	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-3	655	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGCCAGTTTCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	77110939	77016243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
ES.19372.8	chr2	-	3474	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	-233	-521	-233	521	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTGTTAATTTTAAT	NA	False	NA	NA	False	TATAAA	-14	NA	77111169	77016377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ES.19372.9	chr2	-	3484	18	NNC	ENSMUSG00000042272.18	novel	2720	18	NA	NA	-190	520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	38.0668688650684	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGTGTTAATTTTAA	NA	False	NA	NA	False	TATAAA	-13	NA	77111126	77016378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77073065_77073190_77110898
ES.19373.1	chr2	-	2672	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTTGTTTGTTTGTTGTT	7338	False	NA	NA	False	ATTAAA	-20	NA	77139813	77114973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_77117450_77139617
ES.19373.2	chr2	-	1534	1	Intergenic	novelGene_16070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAATGCCATCTAGTT	7101	False	NA	NA	False	ATTAAA	-12	NA	77116700	77115166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_77115200_77116700
ES.19374.1	chr2	-	2620	3	Intergenic	novelGene_16071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAGTGTATGTTAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	77154126	77149911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_77150566_77150685_77150855_77152329
ES.19375.1	chr2	+	436	3	Intergenic	novelGene_16072	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGCCTTTCCCTCCA	NA	False	NA	NA	False	ATTAAA	-8	NA	77174316	77186343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_77174403_77175198_77175307_77186101
ES.19376.1	chr2	-	2712	8	FSM	ENSMUSG00000027016.18	ENSMUST00000111830.9	2642	8	-58	-12	-58	12	multi-exon	FALSE	canonical	1	2	junction_7	1.29362644830535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTGTTTCCTGCCG	NA	False	NA	NA	False	AATAAA	-19	NA	77350020	77240965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77242485_77244297_77244400_77244916_77245096_77246073_77246320_77280494_77280658_77307078_77307190_77333883_77334027_77349771
ES.19376.2	chr2	-	2559	8	NNC	ENSMUSG00000027016.18	novel	2642	8	NA	NA	-58200	12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	1.03015750727543	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTGTTTCCTGCCG	NA	False	NA	NA	False	AATAAA	-19	NA	77450524	77240965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77242485_77244297_77244400_77244916_77245096_77246073_77246320_77280494_77280658_77307078_77307190_77333883_77334027_77450428
ES.19376.3	chr2	-	2746	9	NIC	ENSMUSG00000027016.18	novel	2642	8	NA	NA	-53	12	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	1.98431348329844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTGTTTCCTGCCG	NA	False	NA	NA	False	AATAAA	-19	NA	77350015	77240965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77242485_77244297_77244400_77244916_77245096_77246073_77246320_77280494_77280658_77307078_77307190_77311670_77311710_77333883_77334027_77349771
ES.19376.4	chr2	-	2542	8	NNC	ENSMUSG00000027016.18	novel	2642	8	NA	NA	-58275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.90595200916091	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCTGCTGG	NA	False	NA	NA	False	AATAAA	-7	NA	77450599	77240977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77242485_77244297_77244400_77244916_77245096_77246073_77246320_77280494_77280658_77307078_77307190_77333883_77334027_77450508
ES.19376.5	chr2	-	1290	4	ISM	ENSMUSG00000027016.18	ENSMUST00000111830.9	2642	8	-20	38855	-20	761	5prime_fragment	FALSE	canonical	1	2	junction_3	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGAGTGAGGTCTTT	NA	False	NA	NA	False	AATACA	-9	NA	77349982	77279832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_77280658_77307078_77307190_77333883_77334027_77349771
ES.19376.6	chr2	-	182	1	Intergenic	novelGene_16073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGAGAGTACGTGAA	NA	False	NA	NA	False	NA	NA	NA	77361348	77361166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_77361200_77361300
ES.19377.1	chr2	+	174	1	Intergenic	novelGene_16074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATGTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	77519938	77520112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_77519900_77520100
ES.19378.1	chr2	+	160	1	Intergenic	novelGene_16075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAATCATTTT	NA	False	NA	NA	False	NA	NA	NA	77583243	77583403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_77583200_77583400
ES.19379.1	chr2	+	159	1	Intergenic	novelGene_16076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCAATAAA	6965	False	NA	NA	False	NA	NA	NA	77732725	77732884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_77732700_77732900
ES.1938.1	chr1	+	155	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	172253542	172253697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_172253500_172253700
ES.19380.1	chr2	-	3277	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	11	9	combination_of_known_junctions	TRUE	canonical	3	27	junction_20	70.3935188778058	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTACTCTGACAAGTTCC	NA	False	NA	NA	False	AATAAA	-25	NA	77776513	77725987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77776493
ES.19380.10	chr2	-	3098	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	159	-2	-5	0	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776538	77726109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.12	chr2	-	3304	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	-29	113	-7	0	multi-exon	FALSE	canonical	3	143	junction_19	43.213763581536	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776726	77726109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.16	chr2	-	3577	22	NNC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	86.751136229955	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776516	77726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77773453_77773893_77776493
ES.19380.17	chr2	-	2681	17	NNC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.4591016039716	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776516	77726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741910_77745840_77745923_77747399_77747508_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.18	chr2	-	4208	19	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	8	0	intron_retention	FALSE	canonical	3	78	junction_1	58.8087767448212	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776516	77726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734157_77734379_77734467_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
ES.19380.20	chr2	-	5032	19	NIC	ENSMUSG00000027014.15	novel	3255	20	NA	NA	-5	0	intron_retention	FALSE	canonical	3	78	junction_1	53.6399749587959	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776538	77726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.21	chr2	-	2491	15	NNC	ENSMUSG00000027014.15	novel	3255	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.7168141196904	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776516	77726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734157_77734379_77734467_77734484_77747394_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.23	chr2	-	3915	22	NNC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	86.751136229955	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATTGTCTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	77776512	77726112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77773453_77774236_77776493
ES.19380.26	chr2	-	3629	16	NNC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	-4790	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	60.5400143156023	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATCATTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	77759662	77726116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734139_77734379_77734467_77734780_77734859_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599
ES.19380.27	chr2	-	4669	19	NIC	ENSMUSG00000027014.15	novel	3255	20	NA	NA	5	-5	intron_retention	FALSE	canonical	3	78	junction_1	52.9380024062623	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATCATTGTCTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	77776519	77726116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.28	chr2	-	5739	19	NNC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	2	-6	intron_retention	TRUE	non_canonical	0	0	junction_3	69.5535143470457	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGAATCATTGTCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	77776522	77726117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_77726923_77734139_77734379_77734467_77734776_77734859_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
ES.19380.3	chr2	-	3395	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	0	-7	0	7	multi-exon	TRUE	canonical	3	143	junction_19	43.213763581536	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTACTCTGACAAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	77776697	77725989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.31	chr2	-	2835	1	NIC	ENSMUSG00000027014.15	novel	2603	20	NA	NA	-2414	-1478	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77740925	77738090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77738100_77740900
ES.19380.32	chr2	-	5601	1	NIC	ENSMUSG00000027014.15	novel	3388	20	NA	NA	0	-9808	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAATAATGAA	NA	False	NA	NA	False	NA	NA	NA	77776527	77770926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77770900_77776500
ES.19380.5	chr2	-	3205	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	168	-118	-2	3	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGAGGTACTCTGACA	NA	False	NA	NA	False	AATAAA	-19	NA	77776529	77725993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19380.6	chr2	-	3360	21	NIC	ENSMUSG00000027014.15	novel	3471	21	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	3	27	junction_20	75.0276449050615	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTAAAATATTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	77776728	77726101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77770645_77770707_77776493
ES.19380.7	chr2	-	3368	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	-6	109	-6	4	multi-exon	FALSE	canonical	3	27	junction_20	67.1203955590251	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTTTCTAAAATAT	NA	False	NA	NA	False	AATAAA	-25	NA	77776725	77726105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
ES.19380.8	chr2	-	4451	18	NIC	ENSMUSG00000027014.15	novel	3090	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_1	54.927193081318	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776524	77726109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_77726923_77734157_77734379_77734467_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ES.19381.1	chr2	-	528	1	FSM	ENSMUSG00000082701.2	ENSMUST00000121511.2	639	1	447	-336	447	336	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGCCA	NA	False	NA	-13	True	ATTAAA	-18	NA	78343233	78342705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_78342700_78343200
ES.19382.1	chr2	-	213	1	Intergenic	novelGene_16077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTTTTCCCCCCACTG	NA	False	NA	NA	False	NA	NA	NA	78579183	78578970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_78579000_78579200
ES.19383.1	chr2	+	5983	1	Intergenic	novelGene_16078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCTAGACAAAACCTAAG	NA	False	NA	NA	False	NA	NA	NA	78584523	78590506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_78584500_78590500
ES.19384.1	chr2	+	1833	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-284	700	-284	296	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATGTTGAAAGTCTTG	NA	False	NA	19	True	AATAAA	-27	NA	78699106	78750937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.11	chr2	+	1976	5	ISM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	615	709	-16	287	3prime_fragment	FALSE	canonical	3	305	junction_3	10.7238052947636	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGTCATAATGTTG	NA	False	NA	10	True	AATAAA	-18	NA	78700005	78750928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.12	chr2	+	909	3	ISM	ENSMUSG00000027011.15	ENSMUST00000121433.2	1235	6	43994	-286	-4721	286	3prime_fragment	FALSE	canonical	3	305	junction_1	6	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTTGTCATAATGTT	NA	False	NA	9	True	AATAAA	-17	NA	78744015	78750927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_78744151_78749030_78749179_78750301
ES.19384.13	chr2	+	6885	1	Intergenic	novelGene_16079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACACTTGTCTGTATTTT	NA	False	NA	4	True	NA	NA	NA	78752247	78759132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_78752200_78759100
ES.19384.2	chr2	+	1774	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-102	577	-102	419	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTGTGTGTAGAGTT	NA	False	NA	7	True	ATTAAA	-14	NA	78699288	78751060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.4	chr2	+	3647	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-4	-1394	-4	1394	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGATATAAGTTATTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	78699386	78753031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.5	chr2	+	3864	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	-3	-1612	-3	1612	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCGTCCACGTTGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	78699387	78753249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.6	chr2	+	6484	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	34	-4269	34	4269	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTGTTATTTGTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	78699424	78755906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.7	chr2	+	2079	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	163	7	-30	-7	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTTTCCGGTCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	78699553	78751630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19384.8	chr2	+	1522	6	NNC	ENSMUSG00000027011.15	novel	2249	6	NA	NA	-8	418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.763401658365	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTGTGTGTAGAGT	NA	False	NA	6	True	ATTAAA	-13	NA	78699575	78751059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_78699750_78700764_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ES.19385.1	chr2	-	1252	1	Antisense	novelGene_ENSMUSG00000027011.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGCAAAGCGGCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	78701322	78700070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_78700100_78701300
ES.19386.1	chr2	+	229	1	Intergenic	novelGene_16080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCCCAGGAGGTCACAC	NA	False	NA	NA	False	NA	NA	NA	78954909	78955138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_78954900_78955100
ES.19387.1	chr2	-	4930	11	NNC	ENSMUSG00000075256.10	novel	2604	13	NA	NA	1815	1367	intron_retention	FALSE	canonical	1	3	junction_3	3.82230297072328	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACTGTGTTGTGTTTTC	NA	False	NA	0	True	NA	NA	NA	79199394	79159519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_79163001_79163822_79164002_79168884_79168982_79171636_79171746_79171830_79171857_79172505_79172566_79172646_79172825_79173560_79173636_79185118_79185409_79191667_79191732_79199023
ES.19387.2	chr2	-	2989	13	NNC	ENSMUSG00000075256.10	novel	2604	13	NA	NA	4	1365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.08503365959205	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAACTGTGTTGTGTTT	NA	False	NA	-2	True	NA	NA	NA	79201205	79159521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_79161106_79162913_79163001_79163822_79164002_79168884_79168982_79171636_79171746_79171830_79171857_79172505_79172566_79172646_79172825_79173560_79173636_79185118_79185409_79191667_79191732_79199023_79199156_79201097
ES.19387.3	chr2	-	2808	12	NNC	ENSMUSG00000075256.10	novel	2604	13	NA	NA	1781	-563	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_11	3.88682878662399	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTGTCTAACGTGGAC	NA	False	NA	NA	False	NA	NA	NA	79199428	79161449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_79163001_79163822_79164002_79168884_79168982_79171636_79171746_79171830_79171857_79172505_79172566_79172646_79172825_79173560_79173636_79185118_79185409_79191667_79191732_79199023_79199156_79199381
ES.19387.4	chr2	-	2454	4	FSM	ENSMUSG00000075256.10	ENSMUST00000130499.2	610	4	29	-1873	4	1873	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAACAGAAA	NA	False	NA	NA	False	TATAAA	-10	NA	79201205	79183258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_79185409_79191667_79191732_79199023_79199156_79201097
ES.19387.5	chr2	-	1121	4	FSM	ENSMUSG00000075256.10	ENSMUST00000130499.2	610	4	15	-526	-10	526	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTATCAGTAGAATTT	NA	False	NA	NA	False	TATAAA	-19	NA	79201219	79184605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_79185409_79191667_79191732_79199023_79199156_79201097
ES.19388.1	chr2	-	2097	4	NNC	ENSMUSG00000075256.10	novel	462	2	NA	NA	-754	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGTTTGTTTAGGGC	NA	False	NA	NA	False	NA	NA	NA	79260095	79217860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_79219562_79223286_79223530_79242655_79242784_79260070
ES.19389.1	chr2	-	2618	2	FSM	ENSMUSG00000034701.10	ENSMUST00000041099.5	2729	2	-5	116	-5	-116	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTTTCATTTCTTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	79287100	79282980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_79285393_79286894
ES.1939.1	chr1	+	222	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAAGATTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	172255065	172255287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_172255100_172255300
ES.19390.1	chr2	+	5309	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-134	-7	-134	7	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTTGAGCTGTAAC	NA	False	NA	26	True	AATAAA	-27	NA	79465561	79503317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.11	chr2	+	5727	17	NNC	ENSMUSG00000027007.17	novel	5168	18	NA	NA	8	-4	intron_retention	FALSE	canonical	0	0	junction_15	16.5556589645354	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTAAATTTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	79465777	79503306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492918_79493109_79501073
ES.19390.12	chr2	+	5056	17	ISM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	400	0	291	0	3prime_fragment	FALSE	canonical	3	47	junction_13	7.94094413467316	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79466095	79503310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.13	chr2	+	4674	15	ISM	ENSMUSG00000027007.17	ENSMUST00000133266.2	4804	16	963	6	963	-6	3prime_fragment	FALSE	canonical	3	47	junction_11	8.31675221146685	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATGTTAAATTTATTT	NA	False	NA	13	True	AATAAA	-14	NA	79470488	79503304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.14	chr2	+	3819	11	NNC	ENSMUSG00000027007.17	novel	4804	16	NA	NA	5661	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	20.4293905929668	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTTAAATTTATTTT	NA	False	NA	14	True	AATAAA	-15	NA	79475186	79503305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490748_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.15	chr2	+	4544	1	Genic_Genomic	ENSMUSG00000027007.17	novel	NA	NA	NA	NA	32692	3451	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTATCTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	79502217	79506761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_79502200_79506800
ES.19390.4	chr2	+	5013	18	NNC	ENSMUSG00000027007.17	novel	5168	18	NA	NA	-78	-221	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	16.0138348491045	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATTAGAAACTAGTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	79465617	79503089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490748_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.5	chr2	+	5027	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-73	214	-73	-214	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAGTCTTTTAGTAT	NA	False	NA	NA	False	AATAAA	-28	NA	79465622	79503096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.6	chr2	+	6142	17	ISM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	-67	4	-67	-4	intron_retention	FALSE	canonical	3	47	junction_14	7.83820770329544	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTAAATTTATTTTT	NA	False	NA	15	True	AATAAA	-16	NA	79465628	79503306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073
ES.19390.7	chr2	+	5225	19	NNC	ENSMUSG00000027007.17	novel	5168	18	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.5062471661566	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79465725	79503310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79470947_79471035_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.8	chr2	+	5077	17	NIC	ENSMUSG00000027007.17	novel	5168	18	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	16.7812209031405	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTTATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	79465743	79503307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19390.9	chr2	+	5148	18	NNC	ENSMUSG00000027007.17	novel	5168	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.1909026530247	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79465757	79503310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490534_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ES.19391.1	chr2	+	130	1	Intergenic	novelGene_16081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79871330	79871460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_79871300_79871500
ES.19392.1	chr2	+	958	2	Intergenic	novelGene_16082	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	57	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGATATTTTAAATGG	NA	False	NA	NA	False	AATAAA	-19	NA	80026597	80042073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80026685_80041202
ES.19392.2	chr2	+	1157	2	Intergenic	novelGene_16083	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATTTTAAATGCAT	NA	False	NA	NA	False	NA	NA	NA	80026598	80042273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80026685_80041202
ES.19392.3	chr2	+	2783	2	Intergenic	novelGene_16084	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGTGCATGACCA	NA	False	NA	NA	False	NA	NA	NA	80026598	80044026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80026685_80041329
ES.19393.1	chr2	+	4072	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	-11	-19	-11	19	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGTTTGGAAGATTT	NA	False	NA	31	True	AATAAA	-37	NA	80145798	80184406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.10	chr2	+	4340	22	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	222	-187	intron_retention	FALSE	canonical	3	242	junction_18	21.1190341976658	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGAAGTACTTTTTA	NA	False	NA	NA	False	AGTAAA	-9	NA	80146031	80184200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.11	chr2	+	3771	24	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	226	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.6235599263481	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146035	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149584_80149632_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.13	chr2	+	3770	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	228	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	63.0006723039032	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATTCTTTTGAAGATG	NA	False	NA	10	True	AATAAA	-16	NA	80146037	80184385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179717_80180998_80181078_80183202
ES.19393.14	chr2	+	3458	20	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	228	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.0389145681968	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTTGAAGATGATT	NA	False	NA	13	True	AATAAA	-19	NA	80146037	80184388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149588_80155973_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.15	chr2	+	3763	24	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	228	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	61.6235599263481	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146037	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202_80183832_80183886
ES.19393.17	chr2	+	3671	22	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	232	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	64.453467192282	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146041	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80180995_80181078_80183202
ES.19393.18	chr2	+	3162	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	234	-622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	62.9674584721845	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTGTATAGACAGAGGC	NA	False	NA	9	True	AATAAA	-25	NA	80146043	80183765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176966_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.19	chr2	+	3951	24	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	234	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	82.6108237712153	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCTTTTGAAGATGA	NA	False	NA	11	True	AATAAA	-17	NA	80146043	80184386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80152360_80152505_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.2	chr2	+	3597	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	-2	-411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	62.1542502685559	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGTTGGTTTTGTTT	NA	False	NA	9	True	CATAAA	-13	NA	80145807	80183976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165893_80170833_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.21	chr2	+	3123	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	237	-627	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	62.8100902563953	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTACTGTATAGACA	NA	False	NA	4	True	AATAAA	-20	NA	80146046	80183760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155032_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.22	chr2	+	3169	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	241	-626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	62.6780439235514	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACTACTGTATAGACAG	NA	False	NA	5	True	AATAAA	-21	NA	80146050	80183761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177736_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.24	chr2	+	3749	24	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	243	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	61.6235599263481	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146052	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176900_80176953_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.25	chr2	+	4503	22	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	246	0	intron_retention	FALSE	canonical	3	242	junction_18	21.1190341976658	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146055	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.26	chr2	+	2868	20	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	247	-623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	65.8450291748436	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACTGTATAGACAGAGG	NA	False	NA	8	True	AATAAA	-24	NA	80146056	80183764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80170801_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.27	chr2	+	3767	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	247	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	62.1542502685559	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATTCTTTTGAAGATG	NA	False	NA	10	True	AATAAA	-16	NA	80146056	80184385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165886_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.28	chr2	+	3371	21	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	247	3789	247	-688	5prime_fragment	FALSE	canonical	3	242	junction_19	21.8798423211869	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTTACTCGTCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	80146056	80180598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612
ES.19393.29	chr2	+	3739	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	247	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	62.9749556674899	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146056	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165856_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.3	chr2	+	3425	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	3	614	3	-614	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACAGAGGCTTTCTTGT	NA	False	NA	17	True	AATAAA	-33	NA	80145812	80183773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.30	chr2	+	8810	6	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	249	-3353	intron_retention	FALSE	canonical	3	256	junction_2	19.0620040919102	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80146058	80160644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80155471_80155961_80156056_80157001_80157080_80158415
ES.19393.31	chr2	+	3664	22	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	250	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	62.8773055685082	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146059	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.33	chr2	+	3662	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	251	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.7204377040301	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80146060	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147811_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.34	chr2	+	7531	21	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	252	-410	intron_retention	FALSE	canonical	3	8	junction_9	64.1715669124574	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTGGTTTTGTTTC	NA	False	NA	10	True	CATAAA	-14	NA	80146061	80183977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80163535_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.36	chr2	+	3116	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	252	-626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	62.1901243787784	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACTACTGTATAGACAG	NA	False	NA	5	True	AATAAA	-21	NA	80146061	80183761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171249_80174284_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.37	chr2	+	3143	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	255	-626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	63.0006723039032	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACTACTGTATAGACAG	NA	False	NA	5	True	AATAAA	-21	NA	80146064	80183761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180990_80181078_80183202
ES.19393.4	chr2	+	3998	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.9816974594686	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80145814	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149628_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.40	chr2	+	3984	24	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	264	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	81.9371099142288	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCTTTTGAAGATGA	NA	False	NA	11	True	AATAAA	-17	NA	80146073	80184386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80166024_80166232_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.41	chr2	+	6210	20	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	264	0	intron_retention	FALSE	canonical	3	242	junction_17	21.1835403620705	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146073	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80179733_80180972_80181078_80183202
ES.19393.42	chr2	+	3834	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	264	97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	62.996851554543	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGAAAGCAGTGTGCATT	NA	False	NA	109	True	CATAAA	-22	NA	80146073	80184484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181037_80183202
ES.19393.43	chr2	+	2535	19	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	289	-623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	66.5751455124208	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTACTGTATAGACAGAGG	NA	False	NA	8	True	AATAAA	-24	NA	80146098	80183764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165897_80176932_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.44	chr2	+	3411	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	295	-410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.7641031532205	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTTGGTTTTGTTTC	NA	False	NA	10	True	CATAAA	-14	NA	80146104	80183977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146224_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.45	chr2	+	2987	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	296	-626	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.7204377040301	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACTACTGTATAGACAG	NA	False	NA	5	True	AATAAA	-21	NA	80146105	80183761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147811_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.46	chr2	+	3631	22	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	296	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	64.3560814175281	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCTTTTGAAGATGA	NA	False	NA	11	True	AATAAA	-17	NA	80146105	80184386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.48	chr2	+	3356	21	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	3693	-4	3693	4	3prime_fragment	FALSE	canonical	3	242	junction_17	21.5412975468053	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGAAGATGATTGTT	NA	False	NA	16	True	AATAAA	-22	NA	80149502	80184391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.49	chr2	+	6455	16	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	7634	-624	intron_retention	FALSE	canonical	3	242	junction_12	24.1071681363771	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTACTGTATAGACAGAG	NA	False	NA	7	True	AATAAA	-23	NA	80153443	80183763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.5	chr2	+	3877	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	12	153	12	-153	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGACTCTTCCCATTT	NA	False	NA	NA	False	AGTAAA	-43	NA	80145821	80184234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.50	chr2	+	2726	19	ISM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	9193	412	-6634	-412	3prime_fragment	FALSE	canonical	3	242	junction_15	22.6132950078292	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTGTTGGTTTTGTT	NA	False	NA	8	True	CATAAA	-12	NA	80155002	80183975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.51	chr2	+	2164	11	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	173	-186	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	85.4280984220063	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTGAAGTACTTTTTAC	4934	False	NA	NA	False	AGTAAA	-10	NA	80164069	80184201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80164184_80165796_80165912_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.52	chr2	+	4055	6	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	-3658	0	intron_retention	FALSE	canonical	3	242	junction_2	17.2209175133034	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80174339	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80174363_80175267_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.53	chr2	+	2415	1	NIC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	3975	0	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80181972	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80182000_80184400
ES.19393.6	chr2	+	4593	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	17	-568	17	568	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATGTCTATGGAATGT	NA	False	NA	NA	False	ATTAAA	-24	NA	80145826	80184955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.7	chr2	+	3628	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	18	396	18	-396	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCACGTGTCTTCCTGA	NA	False	NA	24	True	CATAAA	-28	NA	80145827	80183991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.8	chr2	+	3553	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	209	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.7204377040301	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146018	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147664_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19393.9	chr2	+	3766	23	NNC	ENSMUSG00000027006.14	novel	4042	23	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	62.8100902563953	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80146030	80184387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155032_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ES.19394.1	chr2	+	175	1	Intergenic	novelGene_16085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAATGGTTTACATT	NA	False	NA	NA	False	NA	NA	NA	80288031	80288206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80288000_80288200
ES.19395.1	chr2	+	2722	1	Antisense	novelGene_ENSMUSG00000027002.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGGA	NA	False	NA	NA	False	NA	NA	NA	80345612	80348334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_80345600_80348300
ES.19396.1	chr2	+	213	1	Intergenic	novelGene_16086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACCCAAACAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80352413	80352626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80352400_80352600
ES.19397.1	chr2	+	179	1	Intergenic	novelGene_16087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	80355382	80355561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80355400_80355600
ES.19398.1	chr2	+	167	1	Intergenic	novelGene_16089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	80398482	80398649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80398500_80398600
ES.19399.1	chr2	+	2086	1	Intergenic	novelGene_16090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80406120	80408206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80406100_80408200
ES.194.1	chr1	-	260	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAACAAATGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	24355549	24355289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_24355300_24355500
ES.1940.1	chr1	+	171	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTTGAGAAC	NA	False	NA	NA	False	NA	NA	NA	172274103	172274274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_172274100_172274300
ES.19400.1	chr2	+	1630	1	Antisense	novelGene_ENSMUSG00000027002.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTCACCAAAGCAACTT	NA	False	NA	NA	False	NA	NA	NA	80410991	80412621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_80411000_80412600
ES.19401.1	chr2	-	5542	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-34	-1039	-34	1039	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATAGGTTTCCTTCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	80411642	80329816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.10	chr2	-	4442	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	148.549763453942	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411604	80330855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360651_80364014_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.11	chr2	-	4291	30	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	152.766295440428	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411551	80330855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379282_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.15	chr2	-	4214	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	184	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	149.970815679437	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTTCTTTAAAATCT	NA	False	NA	-3	True	AATAAA	-22	NA	80411424	80330858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385109_80385135_80400462_80400574_80411201
ES.19401.16	chr2	-	4231	29	NIC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	203.960489746301	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGATTTCTTTAAAATC	NA	False	NA	-4	True	AATAAA	-21	NA	80411625	80330859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.17	chr2	-	4471	31	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.44702279097	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGATTTCTTTAAAATC	NA	False	NA	-4	True	AATAAA	-21	NA	80411628	80330859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332645_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.18	chr2	-	4183	30	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	150	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	152.88612255038	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGATTTCTTTAAAATC	NA	False	NA	-4	True	AATAAA	-21	NA	80411458	80330859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.19	chr2	-	4129	28	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	155.89537837482	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGATTTCTTTAAAAT	NA	False	NA	-5	True	AATAAA	-20	NA	80411594	80330860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.2	chr2	-	4625	32	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-20	927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.012416162258	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTTGTGGAAGTCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	80411628	80329928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80330159_80330949_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.20	chr2	-	4018	30	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	164	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	202.336024536433	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATGATTTCTTTAAAA	NA	False	NA	-6	True	AATAAA	-19	NA	80411444	80330861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350861_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370857_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.21	chr2	-	4423	30	NIC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-55	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	152.078535940927	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411663	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.22	chr2	-	4080	30	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	121	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	152.894210860403	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411487	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350272_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.23	chr2	-	4243	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	165	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	150.35423358042	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411443	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400561_80411242
ES.19401.25	chr2	-	4439	29	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	8	-1	intron_retention	FALSE	canonical	2	3	junction_7	154.685473342733	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411600	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.26	chr2	-	4314	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	118	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	150.26619343315	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411490	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379282_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.28	chr2	-	4113	29	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	115	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	155.50609854174	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAATGATTTCTTTAAA	NA	False	NA	-7	True	AATAAA	-18	NA	80411493	80330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.3	chr2	-	5390	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	4	-925	4	925	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGACTTTGTGGAAGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	80411604	80329930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.35	chr2	-	3573	26	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	1631	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	162.766502696347	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAATGATTTCTTTAA	NA	False	NA	-8	True	AATAAA	-17	NA	80383503	80330863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360510_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480
ES.19401.39	chr2	-	5265	30	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	7	-4	intron_retention	FALSE	canonical	3	653	junction_14	57.2222859722557	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGAATGATTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	80411601	80330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.4	chr2	-	5153	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-35	-649	-35	649	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATAGTTTGATAATTC	NA	False	NA	NA	False	AATAAA	-42	NA	80411643	80330206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.42	chr2	-	4230	32	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	158	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.933228515829	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGAATGATTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	80411450	80330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331312_80331371_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358889_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.43	chr2	-	4378	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	94	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	150.426981179131	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGAATGATTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	80411514	80330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379325_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.44	chr2	-	4297	32	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	148.012416162258	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTGAATGATTTCTTT	NA	False	NA	-10	True	AATAAA	-15	NA	80411595	80330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201_80411289_80411437
ES.19401.46	chr2	-	4365	30	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-43	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	152.929716590364	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCTTGAATGATTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	80411651	80330867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379268_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.48	chr2	-	4302	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	149	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	150.430700176379	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCTTGAATGATTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	80411459	80330867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371812_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.49	chr2	-	4605	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	149.615195306716	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCTTGAATGATTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	80411594	80330867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358716_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.5	chr2	-	5428	29	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-20	614	intron_retention	TRUE	canonical	0	0	junction_18	205.89395675583	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAACAGTAAATA	NA	False	NA	NA	False	AATAAA	-7	NA	80411628	80330241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368647_80370462_80370570_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.51	chr2	-	4461	31	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.878681048049	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCTTGAATGATTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	80411625	80330867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332581_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.54	chr2	-	4344	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	106	-7	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_29	148.440938498186	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACCTTGAATGATTTC	NA	False	NA	-13	True	AATAAA	-12	NA	80411502	80330868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385129_80400462_80400574_80411201
ES.19401.55	chr2	-	4327	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	119	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	150.219380314999	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACCTTGAATGATTTC	NA	False	NA	-13	True	AATAAA	-12	NA	80411489	80330868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343531_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.56	chr2	-	7090	30	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	221	-8	intron_retention	FALSE	canonical	3	653	junction_14	67.0019432873452	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACACCTTGAATGATTT	NA	False	NA	-14	True	AATAAA	-11	NA	80411387	80330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.57	chr2	-	4465	31	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	150.312770212277	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACACCTTGAATGATTT	NA	False	NA	-14	True	AATAAA	-11	NA	80411625	80330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355015_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.58	chr2	-	4385	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	52	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_26	150.394532997565	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACACCTTGAATGATTT	NA	False	NA	-14	True	AATAAA	-11	NA	80411556	80330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383564_80383660_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.6	chr2	-	4886	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-306	-111	-190	111	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTCCGGAAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	80411914	80330744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.63	chr2	-	4433	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	150.259494061292	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACACCTTGAATGATT	NA	False	NA	-15	True	AATAAA	-10	NA	80411594	80330870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349909_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.64	chr2	-	4283	31	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	149	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	150.324670851682	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACACCTTGAATGATT	NA	False	NA	-15	True	AATAAA	-10	NA	80411459	80330870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350737_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.65	chr2	-	3655	27	NNC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	1440	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	160.394152086878	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACACCTTGAATGATT	NA	False	NA	-15	True	AATAAA	-10	NA	80383694	80330870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368549_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650
ES.19401.67	chr2	-	3930	32	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	254	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.012416162258	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGTAGTCCCGAATCAC	NA	False	NA	-21	True	AATAAA	-29	NA	80411354	80330954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331270_80331455_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.68	chr2	-	4389	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-21	101	-21	-95	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGGTAGTCCCGAATC	NA	False	NA	-23	True	AATAAA	-27	NA	80411629	80330956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.69	chr2	-	4019	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-35	485	-35	-479	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTATTTAGTGATTAT	NA	False	NA	NA	False	AATGAA	-28	NA	80411643	80331340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.7	chr2	-	4368	30	NIC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	2	29	junction_13	147.266104683274	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTAAAATCTTTGGA	NA	False	NA	2	True	AATAAA	-27	NA	80411625	80330853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.71	chr2	-	3664	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	120	685	120	-679	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTTCATGCTGTTG	NA	False	NA	NA	False	AAAACA	-13	NA	80411488	80331540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.72	chr2	-	3807	31	NNC	ENSMUSG00000027002.14	novel	4597	32	NA	NA	-28	-681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	150.444559740642	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTTCTTCATGCTGT	NA	False	NA	NA	False	AAAACA	-11	NA	80411636	80331542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364042_80365814_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.73	chr2	-	4656	24	ISM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	111	15610	111	-9231	5prime_fragment	FALSE	canonical	3	653	junction_8	58.2173425982847	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTGTTTCATTAGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	80411497	80346465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.74	chr2	-	176	1	Intergenic	novelGene_16088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTAAAAAAAGGAATCTA	NA	False	NA	NA	False	NA	NA	NA	80357992	80357816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_80357800_80358000
ES.19401.75	chr2	-	2048	17	ISM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	164	27871	164	16730	5prime_fragment	FALSE	canonical	3	653	junction_1	64.3407675972241	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGATCGGTAAGATGTA	NA	False	NA	NA	False	AATAAA	-12	NA	80411444	80358726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.8	chr2	-	4520	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	-51	0	-51	0	multi-exon	FALSE	canonical	3	653	junction_15	66.8594213422628	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411659	80330855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19401.9	chr2	-	4568	30	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	-20	0	intron_retention	FALSE	canonical	3	653	junction_15	68.0023431085436	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411628	80330855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ES.19402.1	chr2	+	3161	1	Intergenic	novelGene_16091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACCAAAGAAACTGCAAC	NA	False	NA	NA	False	NA	NA	NA	80438950	80442111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80439000_80442100
ES.19403.1	chr2	+	1003	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	156	473	-25	364	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTCCTTGTTATTTCA	NA	False	NA	3	True	AATACA	-13	NA	80447544	80461532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ES.19403.10	chr2	+	3811	4	NIC	ENSMUSG00000027001.11	novel	1993	4	NA	NA	2	2107	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	40.7948798530186	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATTGCTTCATTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	80447576	80464812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80447629_80451537_80451585_80454669_80454705_80461135
ES.19403.11	chr2	+	2630	11	NIC	ENSMUSG00000026999.15	novel	2688	10	NA	NA	1	614	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	107.850637457551	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTTCATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80447580	80489864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80447951_80451537_80451585_80454551_80454705_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.12	chr2	+	4120	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-23	-2104	12	2104	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTAATTGCTTCATTG	NA	False	NA	NA	False	AATAAA	-15	NA	80447586	80464809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
ES.19403.13	chr2	+	892	5	NNC	ENSMUSG00000027001.11	novel	1324	4	NA	NA	12	364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.6435769357052	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTCCTTGTTATTTCA	NA	False	NA	3	True	AATACA	-13	NA	80447586	80461532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80447629_80451537_80451585_80451891_80452145_80454551_80454705_80461135
ES.19403.14	chr2	+	644	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	144	536	13	370	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTATTTCAGTATCT	NA	False	NA	9	True	AATACA	-19	NA	80447587	80461538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
ES.19403.15	chr2	+	3918	4	FSM	ENSMUSG00000027001.11	ENSMUST00000147290.8	1324	4	144	-2738	13	2107	multi-exon	FALSE	canonical	3	18	junction_1	41.0446910899164	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATTGCTTCATTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	80447587	80464812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447629_80451537_80451585_80454551_80454705_80461135
ES.19403.16	chr2	+	4188	3	NIC	ENSMUSG00000027001.11	novel	1632	4	NA	NA	-17	2107	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	51	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATTGCTTCATTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	80447592	80464812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80447951_80454551_80454705_80461135
ES.19403.17	chr2	+	5157	4	NNC	ENSMUSG00000027001.11	novel	1993	4	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_2	45.7262385167301	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGTACATACTGCAAA	NA	False	NA	NA	False	AATAAA	-15	NA	80447593	80462705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80447951_80451537_80454705_80458874_80458938_80461135
ES.19403.18	chr2	+	2001	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-8	0	-8	0	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGTACATACTGCAAA	NA	False	NA	NA	False	AATAAA	-15	NA	80447601	80462705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
ES.19403.19	chr2	+	3300	1	NIC	ENSMUSG00000027001.11	novel	1632	4	NA	NA	10623	364	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTCCTTGTTATTTCA	NA	False	NA	3	True	AATACA	-13	NA	80458232	80461532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80458200_80461500
ES.19403.2	chr2	+	5791	3	NNC	ENSMUSG00000027001.11	novel	726	3	NA	NA	-6	363	intron_retention	FALSE	non_canonical	0	0	junction_2	9	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCCTTGTTATTTC	NA	False	NA	2	True	AATACA	-12	NA	80447563	80461531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80447629_80451537_80456739_80461006
ES.19403.20	chr2	+	1560	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	1	-2	1	-2	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTTTGGAAGGTTG	NA	False	NA	14	True	AATAAA	-23	NA	80469160	80489248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.21	chr2	+	1810	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	16	-267	0	263	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACTATTTGTTGTTG	NA	False	NA	NA	False	AATACA	-27	NA	80469175	80489513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.23	chr2	+	4429	7	NIC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	149	junction_4	65.63958832561	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	False	NA	16	True	AATAAA	-25	NA	80469176	80489250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80486422_80487532_80487698_80488664
ES.19403.24	chr2	+	2708	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	18	-1167	2	1163	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCACTGTTAATGTTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	80469177	80490413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.25	chr2	+	3522	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_5	129.429517498908	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGTTTGGAAGGTT	NA	False	NA	13	True	AATAAA	-22	NA	80469177	80489247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80478938_80479122_80483197_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.26	chr2	+	3798	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	18	-2257	2	2253	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGTAAAGCTAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	80469177	80491503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.27	chr2	+	2152	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	23	-616	7	612	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTGCTTTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	80469182	80489862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.28	chr2	+	1555	9	NNC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	100.318243605039	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGTTTGGAAGGTT	NA	False	NA	13	True	AATAAA	-22	NA	80469185	80489247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488643
ES.19403.29	chr2	+	3325	8	NIC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	19	0	intron_retention	FALSE	canonical	3	149	junction_4	60.783993596596	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTGGAAGGTTGAT	NA	False	NA	16	True	AATAAA	-25	NA	80469194	80489250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.3	chr2	+	864	4	FSM	ENSMUSG00000027001.11	ENSMUST00000151204.2	1993	4	-45	1174	-5	363	multi-exon	FALSE	canonical	3	15	junction_2	40.1441845795323	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCCTTGTTATTTC	NA	False	NA	2	True	AATACA	-12	NA	80447564	80461531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454669_80454705_80461135
ES.19403.30	chr2	+	1890	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	41	-372	25	368	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATAGTTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	80469200	80489618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.31	chr2	+	2374	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	41	-856	25	852	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCATTTATATTCAGAA	NA	False	NA	NA	False	NA	NA	NA	80469200	80490102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.32	chr2	+	5504	6	NIC	ENSMUSG00000026999.15	novel	1559	9	NA	NA	34	1	intron_retention	FALSE	canonical	3	149	junction_4	66.1918423976852	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGTTTGGAAGGTT	NA	False	NA	13	True	AATAAA	-22	NA	80469209	80489247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80487698_80488664
ES.19403.33	chr2	+	3124	8	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	2128	-1	1680	1	3prime_fragment	FALSE	canonical	3	149	junction_3	60.5060293841592	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGTTTGGAAGGTT	NA	False	NA	13	True	AATAAA	-22	NA	80471287	80489247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ES.19403.34	chr2	+	2033	1	NIC	ENSMUSG00000026999.15	novel	2688	10	NA	NA	932	704	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80475479	80477512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80475500_80477500
ES.19403.35	chr2	+	2918	1	Intergenic	novelGene_16092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATATCTACTTAGAAATA	NA	False	NA	NA	False	NA	NA	NA	80479678	80482596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80479700_80482600
ES.19403.4	chr2	+	4257	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	182	-2807	1	2107	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATTGCTTCATTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	80447570	80464812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ES.19403.5	chr2	+	1897	10	NIC	ENSMUSG00000026999.15	novel	2688	10	NA	NA	-9	263	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	130.641815475051	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACTATTTGTTGTTG	NA	False	NA	NA	False	AATACA	-27	NA	80447570	80489513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_80447629_80451537_80451585_80454551_80454705_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80486292_80486422_80487532_80487698_80488664
ES.19403.6	chr2	+	7230	2	ISM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	182	3618	1	-2781	intron_retention	FALSE	canonical	3	97	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAGAAGAAGAAAAA	NA	False	NA	NA	False	CATAAA	-40	NA	80447570	80458387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_80447951_80451537
ES.19403.7	chr2	+	2152	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	184	-704	-2	4	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACATACTGCAAATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	80447572	80462709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ES.19403.8	chr2	+	3709	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	186	-2263	0	1563	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80447574	80464268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ES.19403.9	chr2	+	7892	3	NNC	ENSMUSG00000027001.11	novel	1632	4	NA	NA	1	-1944	intron_retention	FALSE	non_canonical	0	0	junction_2	48.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGATTTGTTGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	80447575	80459224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_80447951_80451537_80452749_80452918
ES.19404.1	chr2	-	177	1	Intergenic	novelGene_16093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGAAAGAAAGCATGT	2512	False	NA	NA	False	NA	NA	NA	80497303	80497126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_80497100_80497300
ES.19405.1	chr2	-	188	1	Intergenic	novelGene_16094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCACCACTCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	80605085	80604897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_80604900_80605100
ES.19406.1	chr2	+	1679	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	-46	-331	-46	331	mono-exon	FALSE	NA	NA	NA	NA	NA	1653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTCTAAATTAGAGATA	NA	False	NA	6	True	AATAAA	-26	NA	80667438	80669117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80667400_80669100
ES.19406.2	chr2	+	232	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	1251	-181	1251	181	mono-exon	FALSE	NA	NA	NA	NA	NA	1652	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCATTGTTTCTGTCAC	NA	False	NA	NA	False	NA	NA	NA	80668735	80668967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_80668700_80669000
ES.19407.1	chr2	+	2990	3	Intergenic	novelGene_16095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACTTTTTGTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	80835962	80840274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_80836475_80837017_80837901_80838679
ES.19408.1	chr2	+	1551	3	Intergenic	novelGene_16096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGGTCTCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	81822473	81824134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_81822561_81822619_81824015_81824065
ES.19409.1	chr2	-	6021	1	Intergenic	novelGene_16097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGCAATCTAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	82524822	82518801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_82518800_82524800
ES.1941.1	chr1	-	234	1	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTCCAAATTAAAAACAC	4429	False	NA	NA	False	NA	NA	NA	172293569	172293335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_172293300_172293600
ES.19410.1	chr2	-	246	1	Intergenic	novelGene_16098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGGAATTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	83021624	83021378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83021400_83021600
ES.19411.1	chr2	-	487	1	FSM	ENSMUSG00000081400.2	ENSMUST00000119790.2	793	1	444	-138	444	138	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACATTTTATTCAATCA	NA	False	NA	NA	False	NA	NA	NA	83183849	83183362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_83183400_83183800
ES.19412.1	chr2	+	172	1	Intergenic	novelGene_16099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATAAATAAGAATA	NA	False	NA	25	True	NA	NA	NA	83451433	83451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_83451400_83451600
ES.19413.1	chr2	+	4947	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	-8	-2828	-8	2828	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGTGTTATTTTCTAAC	NA	False	NA	9	True	AATAAA	-20	NA	83474770	83497794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.11	chr2	+	5202	9	NIC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	2825	intron_retention	FALSE	canonical	3	620	junction_5	88.8225055940216	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTGTTATTTTCT	NA	False	NA	6	True	AATAAA	-17	NA	83474880	83497791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.12	chr2	+	3286	9	NIC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	909	intron_retention	FALSE	canonical	3	620	junction_5	88.8225055940216	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAACATTTTTTTTAA	NA	False	NA	NA	False	TATAAA	-23	NA	83474880	83495875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.13	chr2	+	4433	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	102	-2424	0	2424	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAAGTGTCTAACCT	NA	False	NA	NA	False	AAAACA	-9	NA	83474880	83497390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.14	chr2	+	4722	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	103	-2714	1	2714	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCAGCCTTCTGGTAATT	NA	False	NA	NA	False	NA	NA	NA	83474881	83497680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.15	chr2	+	2105	9	NIC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	1	-271	intron_retention	FALSE	canonical	3	620	junction_5	88.8225055940216	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCGTTTGATGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	83474881	83494695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.18	chr2	+	8766	11	NNC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	42	6847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	252.014999553598	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGATCTTTGTATGAAC	NA	False	NA	5	True	NA	NA	NA	83474922	83501813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163_83501663_83501710
ES.19413.19	chr2	+	2288	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	161	-338	-27	338	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGCTTAGGAGCTCAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	83474939	83495304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.2	chr2	+	1843	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	19	249	19	-249	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGGTGTCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	83474797	83494717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.20	chr2	+	1565	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	167	379	-21	-379	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCGTTGTAACTGTCCA	NA	False	NA	NA	False	ATTAAA	-21	NA	83474945	83494587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.21	chr2	+	178	1	Intergenic	novelGene_16100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAGACCTTTT	NA	False	NA	NA	False	NA	NA	NA	83483421	83483599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_83483400_83483600
ES.19413.22	chr2	+	1515	5	FSM	ENSMUSG00000027091.15	ENSMUST00000134789.2	1407	5	-116	8	-116	-8	multi-exon	FALSE	canonical	3	620	junction_1	80.8223360216716	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTATGGGCCTTT	NA	False	NA	20	True	AATAAA	-28	NA	83490237	83494958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.23	chr2	+	3222	2	Intergenic	novelGene_16102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATCTTTGTATGAACA	NA	False	NA	6	True	NA	NA	NA	83498545	83501814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_83501664_83501710
ES.19413.24	chr2	+	149	1	Intergenic	novelGene_16103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGCACTTTCCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	83499545	83499694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_83499500_83499700
ES.19413.3	chr2	+	2098	10	NNC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	265.070221304133	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTATGGGCCTTT	NA	False	NA	20	True	AATAAA	-28	NA	83474797	83494958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488859_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.4	chr2	+	2084	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	25	2	-21	-2	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGGGCCTTTTTCTTT	NA	False	NA	26	True	AATAAA	-34	NA	83474803	83494964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.5	chr2	+	2994	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	26	-909	-20	909	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAACATTTTTTTTAA	NA	False	NA	NA	False	TATAAA	-23	NA	83474804	83495875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.6	chr2	+	4341	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	50	-2280	4	2280	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGTAGAGAGTGCTTTT	NA	False	NA	87	True	CATAAA	-2	NA	83474828	83497246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19413.8	chr2	+	8880	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	81	-6850	-21	6850	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTTTGTATGAACACT	NA	False	NA	8	True	NA	NA	NA	83474859	83501816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ES.19414.1	chr2	-	157	2	Intergenic	novelGene_16101	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATAAAATAAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	83524404	83495911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83495933_83524268
ES.19414.2	chr2	-	329	1	Intergenic	novelGene_16104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACATTGATCCCCGA	NA	False	NA	NA	False	NA	NA	NA	83524402	83524073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83524100_83524400
ES.19414.3	chr2	-	197	1	Intergenic	novelGene_16105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCAATCACATTGTGCC	NA	False	NA	NA	False	NA	NA	NA	83524404	83524207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83524200_83524400
ES.19415.1	chr2	-	230	1	Intergenic	novelGene_16106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGCTAATTTCCCACA	NA	False	NA	NA	False	TATAAA	-10	NA	83538285	83538055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83538100_83538300
ES.19416.1	chr2	-	139	1	Intergenic	novelGene_16107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	83544297	83544158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83544200_83544300
ES.19417.1	chr2	+	175	1	Intergenic	novelGene_16110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACCTATT	NA	False	NA	NA	False	NA	NA	NA	83547698	83547873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_83547700_83547900
ES.19418.1	chr2	+	7371	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-320	0	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGGATTCTATCC	NA	False	NA	21	True	AATAAA	-21	NA	83554420	83637260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.11	chr2	+	6948	30	NNC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	28	-3	intron_retention	FALSE	non_canonical	0	0	junction_13	29.2325946466283	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554837	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606896_83609355_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.12	chr2	+	6841	31	NNC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-18	-2	intron_retention	FALSE	non_canonical	0	0	junction_30	26.9744941256242	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTGTGGATTCTAT	NA	False	NA	19	True	AATAAA	-19	NA	83554852	83637258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583_83636108_83636203
ES.19418.13	chr2	+	6908	30	NNC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-14	-5	intron_retention	FALSE	canonical	0	0	junction_23	27.43328303058	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCCTGTGTGGATTC	NA	False	NA	16	True	AATAAA	-16	NA	83554884	83637255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625350_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.14	chr2	+	4525	1	Genic_Genomic	ENSMUSG00000027087.12	novel	NA	NA	NA	NA	12814	1155	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83567712	83572237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_83567700_83572200
ES.19418.15	chr2	+	6535	28	NNC	ENSMUSG00000027087.12	novel	444	5	NA	NA	23939	-5	intron_retention	FALSE	canonical	0	0	junction_1	27.0786589825052	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCCTGTGTGGATTC	NA	False	NA	16	True	AATAAA	-16	NA	83578837	83637255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83579070_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.17	chr2	+	6255	18	NNC	ENSMUSG00000027087.12	novel	6788	28	NA	NA	-26186	-5	intron_retention	FALSE	canonical	0	0	junction_2	32.3863998112412	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCCTGTGTGGATTC	NA	False	NA	16	True	AATAAA	-16	NA	83606006	83637255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83606904_83609357_83609404_83612284_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.19	chr2	+	4999	13	ISM	ENSMUSG00000027087.12	ENSMUST00000111740.9	6788	28	64357	3	-12937	-3	3prime_fragment	FALSE	canonical	3	99	junction_1	16.1458198924675	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83619255	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.20	chr2	+	4611	12	NNC	ENSMUSG00000027087.12	novel	6788	28	NA	NA	-9901	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	38.7746189456475	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83622291	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583_83635299_83635420
ES.19418.21	chr2	+	4469	8	ISM	ENSMUSG00000027087.12	ENSMUST00000111740.9	6788	28	70362	3	-6932	-3	3prime_fragment	FALSE	canonical	3	105	junction_1	14.0393034305954	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83625260	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.22	chr2	+	4387	7	ISM	ENSMUSG00000027087.12	ENSMUST00000111740.9	6788	28	70883	3	-6411	-3	3prime_fragment	FALSE	canonical	3	114	junction_3	11.0415880500346	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83625781	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.23	chr2	+	4388	5	ISM	ENSMUSG00000027087.12	ENSMUST00000111740.9	6788	28	71657	6	-5637	-6	intron_retention	FALSE	canonical	3	114	junction_2	9.36416040016402	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTTCCTGTGTGGATT	NA	False	NA	15	True	AATAAA	-15	NA	83626555	83637254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223
ES.19418.3	chr2	+	3911	31	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	-157	-4	combination_of_known_junctions	FALSE	canonical	2	9	junction_30	28.2263863944517	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCCTGTGTGGATTCT	NA	False	NA	17	True	AATAAA	-17	NA	83554583	83637256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583_83633681_83636976
ES.19418.5	chr2	+	6971	30	NNC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_16	29.7820860855185	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	False	NA	18	True	AATAAA	-18	NA	83554744	83637257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615752_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.7	chr2	+	3613	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	60	3381	0	-450	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACGTGTGTTCTTAGGG	NA	False	NA	NA	False	NA	NA	NA	83554800	83633879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19418.8	chr2	+	4197	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	4	150	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTGGTCTCAGCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	83554813	83634479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ES.19419.1	chr2	-	178	1	Intergenic	novelGene_16108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	83546465	83546287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83546300_83546500
ES.19419.2	chr2	-	156	2	Intergenic	novelGene_16109	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	83577836	83546308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83546437_83577808
ES.19419.3	chr2	-	2311	1	Antisense	novelGene_ENSMUSG00000027087.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATTCCAAGTCTGGA	NA	False	NA	NA	False	AATACA	-12	NA	83555278	83552967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_83553000_83555300
ES.19419.4	chr2	-	167	1	Intergenic	novelGene_16111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAATTTACAAA	NA	False	NA	NA	False	NA	NA	NA	83558367	83558200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83558200_83558400
ES.1942.1	chr1	+	922	2	ISM	ENSMUSG00000026548.5	ENSMUST00000027830.5	1313	4	-58	1761	-58	-1761	5prime_fragment	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAATTTCTTCACCTG	NA	False	NA	NA	False	AATAAA	-17	NA	172302866	172304381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172303107_172303699
ES.19420.1	chr2	-	1567	1	NIC	ENSMUSG00000085335.2	novel	2264	2	NA	NA	212	-20305	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGAACTAGCTGCACA	NA	False	NA	NA	False	NA	NA	NA	83589997	83588430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_83588400_83590000
ES.19421.1	chr2	+	5675	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	-61	0	-61	0	multi-exon	FALSE	canonical	1	2	junction_6	1.35526185435788	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAGTGTTTAATTTC	NA	False	NA	3	True	AATAAA	-16	NA	83642918	83713830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
ES.19421.2	chr2	+	5190	5	NIC	ENSMUSG00000048388.4	novel	5614	8	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.08972473588517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTGTAGTGTTTAATT	NA	False	NA	1	True	AATAAA	-14	NA	83642981	83713828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_83643322_83683713_83683948_83707014_83707132_83708499_83708624_83709453
ES.19422.1	chr2	-	176	1	Intergenic	novelGene_16112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAGCATAA	NA	False	NA	NA	False	NA	NA	NA	83658316	83658140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83658100_83658300
ES.19423.1	chr2	+	3095	2	NNC	ENSMUSG00000094125.2	novel	732	2	NA	NA	-797	480	intron_retention	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGACAGAATGTGGAAA	9881	False	NA	NA	False	AATAAA	-28	NA	83785239	83789009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83785274_83785948
ES.19423.2	chr2	+	3124	2	NNC	ENSMUSG00000094125.2	novel	732	2	NA	NA	-786	466	intron_retention	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTGAAAAAAAAATGGATG	9892	False	NA	NA	False	AATAAA	-14	NA	83785250	83788995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83785290_83785910
ES.19423.3	chr2	+	2987	2	NNC	ENSMUSG00000094125.2	novel	732	2	NA	NA	-783	332	intron_retention	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGAAGATGTTTTCT	9895	False	NA	NA	False	TATAAA	-13	NA	83785253	83788861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83785290_83785910
ES.19424.1	chr2	+	3095	2	NNC	ENSMUSG00000094336.2	novel	732	2	NA	NA	-797	480	intron_retention	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGACAGAATGTGGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	83791049	83794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83791084_83791758
ES.19424.2	chr2	+	3185	2	NNC	ENSMUSG00000094336.2	novel	732	2	NA	NA	-784	583	intron_retention	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATTTTCATTGTCCTTA	NA	False	NA	NA	False	AATAAA	-24	NA	83791062	83794922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83791084_83791758
ES.19425.1	chr2	+	3075	2	NNC	ENSMUSG00000096729.2	novel	732	2	NA	NA	-786	471	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGGATGACAGA	NA	False	NA	NA	False	AATAAA	-19	NA	83796870	83800620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83796894_83797568
ES.19426.1	chr2	+	3092	2	NNC	ENSMUSG00000096484.2	novel	732	2	NA	NA	-794	480	intron_retention	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGACAGAATGTGGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	83802672	83806439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83802704_83803378
ES.19427.1	chr2	+	3461	2	NNC	ENSMUSG00000096337.2	novel	732	2	NA	NA	-794	852	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAATGATGATGTATAA	1891	False	NA	NA	False	AGTAAA	-16	NA	83808482	83812621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83808514_83809191
ES.19427.2	chr2	+	3075	2	NNC	ENSMUSG00000096337.2	novel	732	2	NA	NA	-786	471	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGGATGACAGA	1899	False	NA	NA	False	AATAAA	-19	NA	83808490	83812240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83808514_83809188
ES.19427.3	chr2	+	3237	2	NNC	ENSMUSG00000096337.2	novel	732	2	NA	NA	-784	581	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAATTTTCATTGTCCT	1901	False	NA	NA	False	AATAAA	-22	NA	83808492	83812350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83808530_83809150
ES.19427.4	chr2	+	3187	2	NNC	ENSMUSG00000096337.2	novel	732	2	NA	NA	-783	586	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGTCCTTAGCA	1902	False	NA	NA	False	AATAAA	-27	NA	83808493	83812355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83808514_83809188
ES.19427.5	chr2	+	3304	2	NNC	ENSMUSG00000096337.2	novel	732	2	NA	NA	-750	576	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAAGCTAATTTTCATT	1935	False	NA	NA	False	AATAAA	-17	NA	83808526	83812345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83808674_83809188
ES.19428.1	chr2	+	3196	2	NNC	ENSMUSG00000095824.2	novel	732	2	NA	NA	-797	581	intron_retention	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAATTTTCATTGTCCT	1439	False	NA	NA	False	AATAAA	-22	NA	83814289	83818160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83814324_83814998
ES.19428.2	chr2	+	3523	2	NNC	ENSMUSG00000095824.2	novel	732	2	NA	NA	-797	908	intron_retention	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAAGGGTTTGGTGCCTG	1439	False	NA	NA	False	TATAAA	-36	NA	83814289	83818487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83814324_83814998
ES.19428.3	chr2	+	3247	2	NNC	ENSMUSG00000095824.2	novel	732	2	NA	NA	-797	578	intron_retention	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCTAATTTTCATTGT	1439	False	NA	NA	False	AATAAA	-19	NA	83814289	83818157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_83814340_83814960
ES.19428.4	chr2	+	3319	3	Genic_Genomic	ENSMUSG00000095824.2_ENSMUSG00000079247.3	novel	2493	1	NA	NA	-786	579	multi-exon	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTAATTTTCATTGTC	1450	False	NA	NA	False	AATAAA	-20	NA	83814300	83823968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_83814324_83814998_83815234_83820907
ES.19428.5	chr2	+	3086	2	Genic_Genomic	ENSMUSG00000079247.3	novel	2493	1	NA	NA	-797	471	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGGATGACAGA	7249	False	NA	NA	False	AATAAA	-19	NA	83820099	83823860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_83820134_83820808
ES.19428.6	chr2	+	3201	2	Genic_Genomic	ENSMUSG00000079247.3	novel	2493	1	NA	NA	-797	586	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGTCCTTAGCA	7249	False	NA	NA	False	AATAAA	-27	NA	83820099	83823975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_83820134_83820808
ES.19428.7	chr2	+	3245	2	Genic_Genomic	ENSMUSG00000079247.3	novel	2493	1	NA	NA	-797	576	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAAGCTAATTTTCATT	7249	False	NA	NA	False	AATAAA	-17	NA	83820099	83823965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_83820150_83820770
ES.19428.8	chr2	+	3364	1	FSM	ENSMUSG00000079247.3	ENSMUST00000099947.3	2493	1	-19	-852	-19	852	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAATGATGATGTATAA	8027	False	NA	NA	False	AGTAAA	-16	NA	83820877	83824241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_83820900_83824200
ES.19429.1	chr2	-	210	1	Intergenic	novelGene_16113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAATGAAATACTGTAC	NA	False	NA	NA	False	AATACA	-16	NA	83846777	83846567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_83846600_83846800
ES.1943.1	chr1	+	4150	21	NIC	ENSMUSG00000037995.16	novel	636	6	NA	NA	19	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	3.57631094844953	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCACCTCTCTTTGTG	NA	False	NA	5	True	AATAAA	-17	NA	172309373	172326445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172309436_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ES.1943.2	chr1	+	4148	21	NNC	ENSMUSG00000037995.16	novel	4133	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.69966214673719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTCACCTCTCTTT	NA	False	NA	2	True	AATAAA	-14	NA	172309777	172326442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321651_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ES.1943.3	chr1	+	5842	18	NIC	ENSMUSG00000037995.16	novel	4133	21	NA	NA	0	-1	intron_retention	FALSE	canonical	2	4	junction_14	2.97974709221505	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTCACCTCTCTTTG	NA	False	NA	3	True	AATAAA	-15	NA	172309786	172326443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172318011_172318221_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325692_172325923
ES.1943.4	chr1	+	4123	21	FSM	ENSMUSG00000037995.16	ENSMUST00000052629.13	4133	21	10	0	5	0	multi-exon	FALSE	canonical	2	4	junction_16	2.95127091267474	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	NA	False	NA	4	True	AATAAA	-16	NA	172309791	172326444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ES.1943.5	chr1	+	3527	18	NNC	ENSMUSG00000037995.16	novel	636	6	NA	NA	-976	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.67635293929406	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTCACCTCTCTTT	105	False	NA	2	True	AATAAA	-14	NA	172317677	172326442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172317728_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ES.1943.6	chr1	+	3648	17	ISM	ENSMUSG00000037995.16	ENSMUST00000111235.8	4205	21	7803	4	-970	-3	3prime_fragment	FALSE	canonical	2	4	junction_12	2.97318747306657	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTGTCACCTCTCTT	111	False	NA	1	True	AATAAA	-13	NA	172317683	172326441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ES.19430.1	chr2	+	3153	1	Intergenic	novelGene_16114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	84294089	84297242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84294100_84297200
ES.19431.1	chr2	-	1322	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	-20	2	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGACTGTCCCCCTTAC	NA	False	NA	0	True	AATAAA	-21	NA	84307139	84263196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ES.19431.10	chr2	-	1469	10	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.5367794209961	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAATCATGTTGACTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	84307124	84263204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84307084
ES.19431.11	chr2	-	1108	7	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	78.9087025196418	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCAATCATGTTGACTG	NA	False	NA	-10	True	AATAAA	-11	NA	84307097	84263206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84307034
ES.19431.12	chr2	-	1101	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-194	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	40.1230529122598	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCCTATACGGTGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	84307119	84263397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ES.19431.13	chr2	-	1420	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	2	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.1066590214064	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATTCCTATACGGTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	84307105	84263398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307084
ES.19431.14	chr2	-	4135	9	NNC	ENSMUSG00000027082.16	novel	3576	8	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	97.3806160126336	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCATCTTGCTTAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	84307130	84270492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84273657_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84307084
ES.19431.15	chr2	-	3033	8	FSM	ENSMUSG00000027082.16	ENSMUST00000111714.8	3614	8	0	581	0	2	multi-exon	FALSE	canonical	3	6	junction_1	78.6801844721492	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTATGATTATTTG	NA	False	NA	NA	False	AATAAA	-23	NA	84307107	84271064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ES.19431.16	chr2	-	3825	10	NNC	ENSMUSG00000027082.16	novel	3968	8	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	100.819359301062	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTATGATTATTTG	NA	False	NA	NA	False	AATAAA	-23	NA	84307105	84271064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84273657_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84305105_84305270_84307034
ES.19431.17	chr2	-	3196	9	NNC	ENSMUSG00000027082.16	novel	3614	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	96.6830356112177	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTTTATTTATGATT	NA	False	NA	NA	False	AATAAA	-18	NA	84307105	84271069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84307034
ES.19431.18	chr2	-	3414	8	NIC	ENSMUSG00000027082.16	novel	3968	8	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	79.5538580241751	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGATTTTATTTATGA	NA	False	NA	NA	False	AATAAA	-16	NA	84307108	84271071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84273657_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ES.19431.19	chr2	-	2242	8	NIC	ENSMUSG00000027082.16	novel	3576	8	NA	NA	0	-1138	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	78.900867794819	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAGTACTAATTTATAC	NA	False	NA	NA	False	TATAAA	-28	NA	84307119	84272204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84273657_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ES.19431.2	chr2	-	1744	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	90.5770390330795	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307108	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84305105_84305270_84307034
ES.19431.20	chr2	-	1830	8	FSM	ENSMUSG00000027082.16	ENSMUST00000090732.10	3576	8	14	1732	2	-1149	multi-exon	FALSE	canonical	3	6	junction_1	78.0159585977021	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGCATATTAATACAGTA	NA	False	NA	NA	False	TATAAA	-17	NA	84307105	84272215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ES.19431.21	chr2	-	2928	7	NIC	ENSMUSG00000027082.16	novel	3614	8	NA	NA	2	-1185	intron_retention	FALSE	canonical	3	91	junction_6	47.3767406599014	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTTTGACAATTATAAA	NA	False	NA	NA	False	AATAAA	-14	NA	84307105	84272251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ES.19431.3	chr2	-	1336	9	NIC	ENSMUSG00000027082.16	novel	1492	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	91	junction_8	41.6863286941894	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307107	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ES.19431.4	chr2	-	1637	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.1066590214064	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307124	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307084
ES.19431.5	chr2	-	8956	2	FSM	ENSMUSG00000027082.16	ENSMUST00000125677.2	679	2	-8274	-3	-8274	-2	multi-exon	FALSE	canonical	3	215	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84273213	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84263529_84264585
ES.19431.6	chr2	-	1660	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	90.2494321311774	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307105	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304449_84305105_84305270_84307034
ES.19431.7	chr2	-	1668	11	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	89.6026785313921	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307105	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304457_84305105_84305270_84307034
ES.19431.9	chr2	-	1395	10	NNC	ENSMUSG00000027082.16	novel	2027	10	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.9687141570869	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTGACTGTCCCCC	NA	False	NA	-4	True	AATAAA	-17	NA	84307109	84263200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84263529_84264429_84264487_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ES.19432.1	chr2	+	5020	1	Antisense	novelGene_ENSMUSG00000087362.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	84335693	84340713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_84335700_84340700
ES.19433.1	chr2	+	157	1	Intergenic	novelGene_16115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	84407740	84407897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84407700_84407900
ES.19434.1	chr2	+	3054	1	Intergenic	novelGene_16118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCCACCGGAGCA	NA	False	NA	NA	False	NA	NA	NA	84465015	84468069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84465000_84468100
ES.19435.1	chr2	+	3455	1	Intergenic	novelGene_16119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGAACCTATTTCAATAA	NA	False	NA	NA	False	NA	NA	NA	84470528	84473983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84470500_84474000
ES.19436.1	chr2	+	219	1	Intergenic	novelGene_16120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGATCTTGCTAATATA	NA	False	NA	NA	False	AATATA	-22	NA	84482968	84483187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84483000_84483200
ES.19437.1	chr2	-	4825	17	NNC	ENSMUSG00000034101.15	novel	5789	17	NA	NA	-8	17384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.1937335536988	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCAGTCTGCCGTCCT	NA	False	NA	NA	False	NA	NA	NA	84480892	84413030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84413046_84431129_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.11	chr2	-	5397	18	NIC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	85.0467813459218	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481089	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ES.19437.14	chr2	-	5288	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	71.6257635212359	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481077	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749_84480946_84480987
ES.19437.15	chr2	-	5073	17	NNC	ENSMUSG00000034101.15	novel	5945	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.4293858955865	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481089	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.16	chr2	-	5409	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	94.9941174649313	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481084	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ES.19437.17	chr2	-	4974	16	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.078943732669	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481053	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.18	chr2	-	5323	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.9254691675894	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481122	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84454613_84454903_84480749
ES.19437.2	chr2	-	5393	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	3	17384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.2040652404741	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCAGTCTGCCGTCCT	NA	False	NA	NA	False	NA	NA	NA	84481106	84413030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84413046_84431127_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.20	chr2	-	5315	17	FSM	ENSMUSG00000034101.15	ENSMUST00000066177.10	5044	17	-271	0	-16	0	multi-exon	FALSE	canonical	3	59	junction_8	59.0602182098915	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481125	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.22	chr2	-	5240	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.9943769156057	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84480974	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442446_84443275_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.23	chr2	-	5226	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	72.2670939776349	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481080	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454796_84480749
ES.19437.25	chr2	-	5077	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-8212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.8796672857038	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84489321	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
ES.19437.26	chr2	-	3269	10	ISM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	37997	0	-190	0	3prime_fragment	FALSE	canonical	3	171	junction_3	41.8598484658061	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	54	False	NA	-38	True	AATAAA	-16	NA	84443112	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875
ES.19437.27	chr2	-	4782	16	NNC	ENSMUSG00000034101.15	novel	5044	17	NA	NA	-11803	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.7153920067383	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84454725	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442443_84443265_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613
ES.19437.28	chr2	-	4764	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-8208	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	74.8287367509969	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84489317	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84489266
ES.19437.29	chr2	-	3919	14	NNC	ENSMUSG00000034101.15	novel	5044	17	NA	NA	-7428	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1483426055952	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84450350	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84431601_84431678_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262
ES.19437.3	chr2	-	9974	1	Genic_Genomic	ENSMUSG00000118521.2	novel	NA	NA	NA	NA	-4229	-10545	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTCTGGATTATT	6881	False	NA	NA	False	NA	NA	NA	84427413	84417439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_84417400_84427400
ES.19437.30	chr2	-	5038	17	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	70.6044217807922	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481074	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.31	chr2	-	5828	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-8218	0	intron_retention	FALSE	canonical	0	0	junction_8	79.907661553821	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84489327	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
ES.19437.34	chr2	-	5170	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	73.010782727373	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84480904	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442442_84443268_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.35	chr2	-	5208	19	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	25	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	79.2040652404741	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84480995	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749_84480886_84480945
ES.19437.37	chr2	-	5121	18	NNC	ENSMUSG00000034101.15	novel	5126	19	NA	NA	-8201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.964029044764	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84489310	84431126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84489266
ES.19437.38	chr2	-	5270	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	69.6614301012404	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84481062	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442442_84443265_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.39	chr2	-	5161	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.5661293970926	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84481059	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454796_84480749
ES.19437.4	chr2	-	12069	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	11	6014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	73.010782727373	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATGTTTTCCCTGCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	84481073	84424400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.40	chr2	-	4050	1	NIC	ENSMUSG00000034101.15	novel	6281	19	NA	NA	4844	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	7989	False	NA	-39	True	AATAAA	-15	NA	84435177	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84431100_84435200
ES.19437.42	chr2	-	4395	16	NNC	ENSMUSG00000034101.15	novel	5047	17	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	98.679863982251	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84481062	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447161_84451162_84451332_84452354_84452427_84480749
ES.19437.43	chr2	-	4171	6	NIC	ENSMUSG00000034101.15	novel	5089	14	NA	NA	-867	-1	intron_retention	FALSE	canonical	3	171	junction_2	39.4086284968153	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	2258	False	NA	-39	True	AATAAA	-15	NA	84440908	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84433248_84433992_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851
ES.19437.44	chr2	-	4773	17	NNC	ENSMUSG00000034101.15	novel	5047	17	NA	NA	-8201	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.2114762796805	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84489310	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84489266
ES.19437.45	chr2	-	5307	19	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	79.2040652404741	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGGAGGTCTGTGTC	NA	False	NA	-39	True	AATAAA	-15	NA	84481089	84431127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749_84480916_84480969
ES.19437.48	chr2	-	5321	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.2917962581397	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84481088	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443421_84444236_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.53	chr2	-	5353	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	73.1056968134112	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84481122	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447291_84450285_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.54	chr2	-	7326	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	22	-2	intron_retention	FALSE	canonical	0	0	junction_10	63.3285085881548	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84481062	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84443434_84444231_84444350_84444567_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.56	chr2	-	4994	16	NNC	ENSMUSG00000034101.15	novel	5047	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	91.2459435932481	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84481082	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442444_84443270_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.59	chr2	-	5152	18	NNC	ENSMUSG00000034101.15	novel	5047	17	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	97.6013004054272	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84481116	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84472736_84472794_84480749
ES.19437.6	chr2	-	5503	19	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.828836877965	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTGTCATTTCTTC	NA	False	NA	-31	True	AATAAA	-23	NA	84481105	84431119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ES.19437.60	chr2	-	5014	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.1503047005639	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84480860	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480803
ES.19437.62	chr2	-	5125	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	-8166	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	72.9351041115642	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84489275	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489150
ES.19437.63	chr2	-	5191	19	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	-8210	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.2716239322786	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84489319	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84489266
ES.19437.64	chr2	-	5009	17	NNC	ENSMUSG00000034101.15	novel	5044	17	NA	NA	-8209	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.1325941913554	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGGAGGTCTGTGT	NA	False	NA	-40	True	AATAAA	-14	NA	84489318	84431128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
ES.19437.65	chr2	-	6179	17	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	163	junction_16	36.14899721984	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGGAGGTCTGTG	NA	False	NA	-41	True	AATAAA	-13	NA	84481086	84431129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.70	chr2	-	1938	1	ISM	ENSMUSG00000034101.15	ENSMUST00000111696.8	6281	19	47877	860	6809	-148	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTCAGCAAACCAAAAAT	9954	False	NA	NA	False	ACTAAA	-6	NA	84433212	84431274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_84431300_84433200
ES.19437.71	chr2	-	3688	17	NNC	ENSMUSG00000034101.15	novel	5945	18	NA	NA	16	386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.4293858955865	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTTTGCAAGATG	NA	False	NA	NA	False	GATAAA	-14	NA	84481068	84432490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ES.19437.72	chr2	-	3517	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	58	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	73.010782727373	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCTGACAAACTGATGA	NA	False	NA	NA	False	NA	NA	NA	84480962	84432841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.73	chr2	-	1977	12	NNC	ENSMUSG00000034101.15	novel	5089	14	NA	NA	-4282	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	81.5589833715149	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTGCAGATTAGCTC	NA	False	NA	NA	False	AAGAAA	-29	NA	84447204	84432975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823
ES.19437.74	chr2	-	3344	18	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-10	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.9943769156057	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGATGATTTTTTTCC	NA	False	NA	NA	False	AATATA	-26	NA	84481119	84433174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.75	chr2	-	3022	18	NNC	ENSMUSG00000034101.15	novel	6170	19	NA	NA	-8210	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.8796672857038	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGACTGATGATTTT	NA	False	NA	NA	False	AATATA	-21	NA	84489319	84433179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84489266
ES.19437.76	chr2	-	3240	17	NNC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-2	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.1642651327958	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGACTGATGATTTT	NA	False	NA	NA	False	AATATA	-21	NA	84481086	84433179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433245_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.77	chr2	-	3311	18	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	-2	-207	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	52.9317638691323	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGACTGATGATTTT	NA	False	NA	NA	False	AATATA	-21	NA	84481111	84433179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.78	chr2	-	3423	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111692.8	6170	19	-16	2763	4	-207	multi-exon	FALSE	canonical	3	20	junction_17	80.2536295860094	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGACTGATGATTTT	NA	False	NA	NA	False	AATATA	-21	NA	84481105	84433179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ES.19437.79	chr2	-	2135	9	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	5	-2760	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	87.7060965668864	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84481104	84442090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.8	chr2	-	5331	17	NNC	ENSMUSG00000034101.15	novel	5294	18	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.6614301012404	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAGGTCTGTGTCATT	NA	False	NA	-36	True	AATAAA	-18	NA	84481119	84431124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ES.19437.80	chr2	-	178	1	Intergenic	novelGene_16116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGAACTT	NA	False	NA	NA	False	NA	NA	NA	84458644	84458466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84458500_84458600
ES.19437.81	chr2	-	247	1	Intergenic	novelGene_16117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCAAATGTAGTAAT	9133	False	NA	NA	False	AGTAAA	-45	NA	84460369	84460122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84460100_84460400
ES.19437.9	chr2	-	5499	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111692.8	6170	19	-37	708	-17	0	multi-exon	FALSE	canonical	3	20	junction_17	80.2536295860094	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAGGTCTGTGTCATT	NA	False	NA	-36	True	AATAAA	-18	NA	84481126	84431124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ES.19438.1	chr2	+	4718	3	NIC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	-65	-3	intron_retention	FALSE	canonical	3	14	junction_2	2	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATTTGCTTTGTGGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	84489357	84499121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84489938_84490440_84491945_84496487
ES.19438.2	chr2	+	3437	4	NIC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	3.2659863237109	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCTTTGTGGTTTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	84489392	84499124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84489938_84490440_84490526_84491774_84491945_84496487
ES.19438.3	chr2	+	3347	4	NNC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.25718035235908	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTGCTTTGTGGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	84489417	84499122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84489938_84490440_84490526_84491837_84491945_84496487
ES.19438.4	chr2	+	3309	5	NNC	ENSMUSG00000086598.10	novel	3052	5	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.68954408012983	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTTGCTTTGTGGTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	84489453	84499122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84489938_84490440_84490526_84491774_84491945_84496487_84498259_84498323
ES.19439.1	chr2	+	4286	1	Antisense	novelGene_ENSMUSG00000050043.17_AS_novelGene_ENSMUSG00000076437.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTTCGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	84499876	84504162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_84499900_84504200
ES.1944.1	chr1	+	1730	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	-145	1	-145	-1	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTGTTTCTAGGGC	9896	False	NA	28	True	AATAAA	-25	NA	172327468	172334946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ES.1944.2	chr1	+	1378	5	NIC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	-14	-5	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	491.019602460024	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTGGCTGTTTCTA	NA	False	NA	24	True	AATAAA	-21	NA	172327797	172334942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172327900_172332705_172332895_172333327_172333503_172333752_172333856_172334133
ES.1944.3	chr1	+	1388	1	NIC	ENSMUSG00000026547.16	novel	1101	2	NA	NA	16	-4204	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCCTACCCAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	172327827	172329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_172327800_172329200
ES.1944.4	chr1	+	1577	5	NNC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	497.371779959418	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTGTTTCTAGGGC	NA	False	NA	28	True	AATAAA	-25	NA	172327831	172334946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172328110_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ES.1944.5	chr1	+	756	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	226	604	28	43	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCCTGAGAGCCCCTG	NA	False	NA	NA	False	AATATA	-24	NA	172327839	172334343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ES.1944.7	chr1	+	1630	4	ISM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	229	5	31	-5	intron_retention	FALSE	canonical	3	987	junction_1	117.916166076676	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTGGCTGTTTCTA	NA	False	NA	24	True	AATAAA	-21	NA	172327842	172334942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752
ES.19440.1	chr2	-	3816	3	ISM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	44	-3114	-10	3108	intron_retention	FALSE	canonical	3	329	junction_1	943.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCTTTTTCTCTGCT	402	False	NA	NA	False	NA	NA	NA	84501008	84496450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_84499742_84500355_84500461_84500588
ES.19440.10	chr2	-	619	4	NIC	ENSMUSG00000076437.12	novel	654	4	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	1	43	junction_2	1068.00447356533	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	361	False	NA	-18	True	AATAAA	-15	NA	84501049	84499568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84499742_84500355_84500461_84500616_84500735_84500826
ES.19440.11	chr2	-	1368	2	NIC	ENSMUSG00000076437.12	novel	783	3	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	2438	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	382	False	NA	-18	True	AATAAA	-15	NA	84501028	84499568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84500735_84500826
ES.19440.12	chr2	-	644	4	NNC	ENSMUSG00000076437.12	novel	747	4	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1100.69594146411	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	382	False	NA	-18	True	AATAAA	-15	NA	84501028	84499568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84499735_84500330_84500461_84500588_84500735_84500826
ES.19440.13	chr2	-	1439	1	NIC	ENSMUSG00000076437.12	novel	747	4	NA	NA	-11	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATAAGGAGCAAGTTT	401	False	NA	-20	True	AATAAA	-13	NA	84501009	84499570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84499600_84501000
ES.19440.14	chr2	-	834	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	-41	-10	-30	10	multi-exon	FALSE	canonical	3	2216	junction_1	111	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGGTTTTTCTCCCTT	328	False	NA	NA	False	AATAAA	-25	NA	84501082	84500028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84500461_84500588_84500735_84500826
ES.19440.15	chr2	-	2333	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	5	-361	-2	360	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAACGCCCTGGAAATGT	5296	False	NA	NA	False	NA	NA	NA	84508395	84501299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.16	chr2	-	3432	8	NNC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	576.621157419387	630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTTTTCCTTTACTA	5284	False	NA	-2	True	AATAAA	-22	NA	84508407	84501654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84505393_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.17	chr2	-	1913	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	18	-5	18	5	multi-exon	FALSE	canonical	3	107	junction_5	582.842865235181	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTTTTCCTTTACTA	5247	False	NA	-2	True	AATAAA	-22	NA	84508444	84501654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
ES.19440.19	chr2	-	2055	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-72	-6	-10	5	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTTTTCCTTTACTA	5219	False	NA	-2	True	AATAAA	-22	NA	84508472	84501654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.2	chr2	-	814	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	72	-139	-1	139	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGGTGGTGTATACC	368	False	NA	-6	True	TATAAA	-14	NA	84501042	84499419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ES.19440.21	chr2	-	2113	7	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	28	1	intron_retention	FALSE	canonical	3	1517	junction_5	83.2294352311061	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTGTTTTTCCTTT	5257	False	NA	-6	True	AATAAA	-18	NA	84508434	84501658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84502877_84503367_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.22	chr2	-	2268	6	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-9	1	intron_retention	FALSE	canonical	3	1517	junction_4	82.045353311446	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGCTGTTTTTCCTTT	5282	False	NA	-6	True	AATAAA	-18	NA	84508409	84501658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84502877_84503367_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.23	chr2	-	4454	3	NIC	ENSMUSG00000050043.17	novel	1926	7	NA	NA	-21	0	intron_retention	FALSE	canonical	3	107	junction_1	811	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5270	False	NA	-7	True	AATAAA	-17	NA	84508421	84501659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84505826_84506440_84506502_84508194
ES.19440.24	chr2	-	1977	8	NNC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	585.94413608487	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5283	False	NA	-8	True	AATAAA	-16	NA	84508408	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503939_84505744_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.26	chr2	-	2421	7	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	34	0	intron_retention	FALSE	canonical	3	1517	junction_1	101.961866510094	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5338	False	NA	-8	True	AATAAA	-16	NA	84508353	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.27	chr2	-	2035	8	NNC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	579.846003482909	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5284	False	NA	-8	True	AATAAA	-16	NA	84508407	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506500_84508141
ES.19440.3	chr2	-	5086	10	Fusion	ENSMUSG00000076437.12_ENSMUSG00000050043.17	novel	2282	9	NA	NA	18	-1	intron_retention	FALSE	canonical	3	329	junction_1	552.600943239455	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTTTAAATTTTGTCT	5247	False	NA	-9	True	AATAAA	-24	NA	84508444	84499559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826_84502877_84503367_84503498_84503597_84503664_84503843_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.30	chr2	-	4557	4	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1517	junction_2	104.969836937411	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5280	False	NA	-8	True	AATAAA	-16	NA	84508411	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.31	chr2	-	2565	6	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	1517	junction_4	90.4844738062835	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5294	False	NA	-8	True	AATAAA	-16	NA	84508397	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.34	chr2	-	5039	2	ISM	ENSMUSG00000050043.17	ENSMUST00000152149.2	424	3	1092	-4789	1	0	3prime_fragment	FALSE	canonical	3	1729	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5299	False	NA	-8	True	AATAAA	-16	NA	84508392	84501660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_84506502_84508194
ES.19440.36	chr2	-	3709	7	NIC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	51	-2	intron_retention	FALSE	canonical	3	1517	junction_2	101.811372427424	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGCCTTGCTGTTTTTC	5355	False	NA	-10	True	AATAAA	-14	NA	84508336	84501662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.37	chr2	-	1991	8	NNC	ENSMUSG00000050043.17	novel	1977	8	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	585.94413608487	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGCCTTGCTGTTTTTC	5273	False	NA	-10	True	AATAAA	-14	NA	84508418	84501662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503945_84505744_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.38	chr2	-	1835	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-18	160	-18	-160	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGAATGGCCACCCTG	5273	False	NA	NA	False	ATTAAA	-33	NA	84508418	84501820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.4	chr2	-	3312	11	Fusion	ENSMUSG00000076437.12_ENSMUSG00000050043.17	novel	2282	9	NA	NA	19	-1	multi-exon	FALSE	canonical	3	1517	junction_5	282.665898190779	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTTTAAATTTTGTCT	5248	False	NA	-9	True	AATAAA	-24	NA	84508443	84499559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.40	chr2	-	1293	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-7	691	-7	255	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAAGCCCTTAGAATT	5284	False	NA	NA	False	ATTAAA	-18	NA	84508407	84502351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.41	chr2	-	1125	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	-11	863	-11	83	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCGAAGGGAGTGAT	5280	False	NA	NA	False	NA	NA	NA	84508411	84502523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.5	chr2	-	3385	10	Fusion	ENSMUSG00000076437.12_ENSMUSG00000050043.17	novel	2282	9	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1517	junction_4	195.997732413187	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	5262	False	NA	-14	True	AATAAA	-19	NA	84508429	84499564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_84499742_84500330_84500461_84500588_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19440.7	chr2	-	1321	2	FSM	ENSMUSG00000076437.12	ENSMUST00000154179.2	599	2	5	-727	5	-2	multi-exon	FALSE	canonical	3	2216	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGGAGCAAGTTTAAAT	395	False	NA	-16	True	AATAAA	-17	NA	84501015	84499566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84500461_84500588
ES.19440.8	chr2	-	1216	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	37	-470	-6	-4	multi-exon	FALSE	canonical	3	2216	junction_1	111	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	406	False	NA	-18	True	AATAAA	-15	NA	84501004	84499568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84500461_84500588_84500735_84500826
ES.19440.9	chr2	-	3453	9	Fusion	ENSMUSG00000076437.12_ENSMUSG00000050043.17	novel	2282	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	1517	junction_7	192.188546745117	915	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	5290	False	NA	-18	True	AATAAA	-15	NA	84508401	84499568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_84499742_84500330_84500461_84500588_84502877_84503367_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ES.19441.1	chr2	+	2138	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	-76	-3	-76	3	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGAGTCTTCCCTGTT	3281	False	NA	15	True	AATAAA	-24	NA	84508669	84518562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.10	chr2	+	2017	5	NNC	ENSMUSG00000027080.7	novel	2059	5	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	208.718111336798	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGGCTGGAGTCTTCC	3391	False	NA	10	True	AATAAA	-19	NA	84508779	84518557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516624_84517209
ES.19441.11	chr2	+	2595	4	ISM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	43	1	43	-1	intron_retention	FALSE	canonical	3	447	junction_3	25.381533094402	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGGCTGGAGTCTTCCC	3400	False	NA	11	True	AATAAA	-20	NA	84508788	84518558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534
ES.19441.12	chr2	+	876	5	NNC	ENSMUSG00000027080.7	novel	2059	5	NA	NA	96	-867	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	205.27359791264	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGCTCATTTTGTATTA	3453	False	NA	NA	False	NA	NA	NA	84508841	84516976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84516713
ES.19441.13	chr2	+	3047	11	Intergenic	novelGene_16122	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4865	False	NA	NA	False	NA	NA	NA	84520435	84543248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84521056_84521471_84521583_84522229_84522354_84522676_84522812_84523694_84523783_84524656_84524762_84524913_84525086_84526585_84526745_84532676_84532801_84540663_84541813_84542988
ES.19441.14	chr2	+	160	1	Intergenic	novelGene_16124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	6839	False	NA	NA	False	NA	NA	NA	84532312	84532472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84532300_84532500
ES.19441.15	chr2	+	5317	2	Antisense	novelGene_ENSMUSG00000034075.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTGATCT	NA	False	NA	NA	False	NA	NA	NA	84536743	84542397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_84538578_84538914
ES.19441.16	chr2	+	2961	2	Antisense	novelGene_ENSMUSG00000034075.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAACCAACAA	NA	False	NA	NA	False	NA	NA	NA	84537023	84540321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_84538578_84538914
ES.19441.17	chr2	+	3942	1	Antisense	novelGene_ENSMUSG00000034075.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGATCTTGC	NA	False	NA	NA	False	NA	NA	NA	84538458	84542400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_84538500_84542400
ES.19441.2	chr2	+	2839	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	-9	-771	-9	771	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGTTCCCTCCAGGG	3348	False	NA	20	True	AATAAA	-24	NA	84508736	84519330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.3	chr2	+	1625	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	0	434	0	282	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTTTTTGTTGTTGT	3357	False	NA	13	True	AAAAAG	-19	NA	84508745	84518125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.4	chr2	+	1904	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	7	148	7	-148	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTCTCTTTTGACTCCC	3364	False	NA	16	True	AATAAA	-18	NA	84508752	84518411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.5	chr2	+	2628	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	20	-589	20	589	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATATATCT	3377	False	NA	NA	False	AATAAA	-17	NA	84508765	84519148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.6	chr2	+	1075	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	22	962	22	-246	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCAAGTGCCATTCTA	3379	False	NA	110	True	TTTAAA	-37	NA	84508767	84517597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.7	chr2	+	6072	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	23	-4036	23	4036	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAATTCAAGTTTTT	3380	False	NA	NA	False	AATGAA	-39	NA	84508768	84522595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.8	chr2	+	1211	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	31	817	31	-101	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGCTACTATTTTCC	3388	False	NA	NA	False	AATAGA	-19	NA	84508776	84517742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ES.19441.9	chr2	+	2368	5	NNC	ENSMUSG00000027080.7	novel	2059	5	NA	NA	31	-156	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	205.27359791264	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGAGGTTTCTCTTT	3388	False	NA	8	True	AATAAA	-10	NA	84508776	84518403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84516713
ES.19442.1	chr2	-	165	1	Intergenic	novelGene_16121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAACAACT	3130	False	NA	NA	False	NA	NA	NA	84510561	84510396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84510400_84510600
ES.19443.1	chr2	-	6601	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	115	-2010	-29	2010	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTACTGCTATAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	84545409	84516303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.10	chr2	-	4769	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-49	-165	intron_retention	FALSE	canonical	3	249	junction_4	29.3455277682989	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545429	84518478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.11	chr2	-	4409	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	44	-165	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	87.0559808494103	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545480	84518478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84524999_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.12	chr2	-	4556	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-137	-165	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	91.0773846791837	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545661	84518478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84540661_84541817_84545326
ES.19443.14	chr2	-	4680	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	11	-167	intron_retention	FALSE	canonical	3	249	junction_5	27.5806091303292	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCTGACTTGTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	84545513	84518480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.15	chr2	-	4552	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-2	-167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.0882352535379	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCCTGACTTGTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	84545526	84518480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519796_84520189_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.16	chr2	-	5944	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-51	-169	intron_retention	FALSE	canonical	3	249	junction_5	29.7491176339736	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCCCCTGACTTGTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	84545431	84518482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.17	chr2	-	5049	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-109	-171	intron_retention	FALSE	canonical	3	249	junction_4	29.5670424628504	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCCCCCTGACTTGTG	NA	False	NA	-6	True	AATAAA	-17	NA	84545633	84518484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.18	chr2	-	4463	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-51	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.0882352535379	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCCCCCTGACTTG	NA	False	NA	-8	True	AATAAA	-15	NA	84545431	84518486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519812_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.2	chr2	-	6176	13	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	6	1337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.014487682305	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAAACTTATCTCATTT	NA	False	NA	NA	False	AATAAA	-21	NA	84545518	84516976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84521876_84522016_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.20	chr2	-	3616	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	123	-173	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	90.8222990239732	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCCCCCTGACTTG	NA	False	NA	-8	True	AATAAA	-15	NA	84545257	84518486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84544821
ES.19443.23	chr2	-	3845	11	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-28	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	93.0937162218804	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGTCCCCCCTGACTT	NA	False	NA	-9	True	AATAAA	-14	NA	84545552	84518487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84541254_84541817_84545326
ES.19443.24	chr2	-	3973	13	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-180	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.0628444151734	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGTCCCCCCTGACTT	NA	False	NA	-9	True	AATAAA	-14	NA	84545704	84518487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84518926_84519664_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.25	chr2	-	4487	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	38	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.6885161256066	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCAGTCCCCCCTGACT	NA	False	NA	-10	True	AATAAA	-13	NA	84545486	84518488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526592_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.26	chr2	-	3954	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-4	756	-4	-756	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCCTCTCTTTTGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	84545528	84519069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.27	chr2	-	3611	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	65	-908	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	91.0773846791837	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAGAAATTATATATCT	NA	False	NA	70	True	NA	NA	NA	84545459	84519221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84540661_84541817_84545326
ES.19443.28	chr2	-	3652	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	65	-982	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.8025016399913	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTCTATTTTTTTCCT	NA	False	NA	-4	True	TTTAAA	-28	NA	84545459	84519295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523778_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.29	chr2	-	3778	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-54	982	-54	-982	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTCTATTTTTTTCCT	NA	False	NA	-4	True	TTTAAA	-28	NA	84545578	84519295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.3	chr2	-	4909	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-152	-51	-152	51	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTATGCCTTTGATCCC	NA	False	NA	NA	False	AGTAAA	-16	NA	84545676	84518262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.30	chr2	-	3639	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-71	-990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	88.8449294422777	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTACGGATTCTATT	NA	False	NA	-12	True	TTTAAA	-20	NA	84545451	84519303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532791_84540657_84541817_84545326
ES.19443.31	chr2	-	222	1	Intergenic	novelGene_16123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAATTAAACAAGTAAGC	NA	False	NA	NA	False	TATAAA	-12	NA	84531658	84531436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84531400_84531700
ES.19443.4	chr2	-	4499	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	67	-18	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	91.0773846791837	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCCTCTCTGTTGAATC	NA	False	NA	NA	False	ATTAAA	-41	NA	84545457	84518331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84540661_84541817_84545326
ES.19443.5	chr2	-	4519	13	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	71	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	85.0628444151734	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCCTCTCTGTTGA	NA	False	NA	NA	False	ATTAAA	-38	NA	84545453	84518334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84540899_84540993_84541817_84545326
ES.19443.6	chr2	-	4720	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	-172	158	-172	-158	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTTTTGTCTGGTTA	NA	False	NA	7	True	AATAAA	-30	NA	84545696	84518471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.7	chr2	-	4301	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-20	-164	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	85.5285946094508	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGACTTGTGTTTTGTC	NA	False	NA	1	True	AATAAA	-24	NA	84545400	84518477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524718_84524986_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.8	chr2	-	4786	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	68	-165	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	88.3834620482608	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545456	84518478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84523123_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ES.19443.9	chr2	-	3635	12	NNC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	-59	-165	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	88.8449294422777	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGACTTGTGTTTTGT	NA	False	NA	0	True	AATAAA	-23	NA	84545439	84518478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532754_84541437_84541817_84545326
ES.19444.1	chr2	+	203	1	Intergenic	novelGene_16125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGTCAGGTATGATGG	522	False	NA	NA	False	NA	NA	NA	84550461	84550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84550500_84550700
ES.19445.1	chr2	-	2852	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	83	-1023	9	5	multi-exon	FALSE	canonical	3	238	junction_1	30.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCACATGCTTATTAG	NA	False	NA	NA	False	AATAAA	-21	NA	84557611	84552442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84554562_84555872_84556501_84557506
ES.19445.11	chr2	-	2167	1	NIC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	9	-1977	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84557611	84555444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84555400_84557600
ES.19445.2	chr2	-	3477	2	NIC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	1	363	intron_retention	FALSE	canonical	3	299	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGTGAGCCAATCACA	NA	False	NA	NA	False	NA	NA	NA	84557585	84553102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84556501_84557506
ES.19445.3	chr2	-	2209	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	59	-356	-15	356	multi-exon	FALSE	canonical	3	238	junction_1	30.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTACTTGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	84557635	84553109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84554562_84555872_84556501_84557506
ES.19445.4	chr2	-	1928	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	-18	2	-18	0	multi-exon	FALSE	canonical	3	238	junction_1	30.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTATGATTCTTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	84557712	84553467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84554562_84555872_84556501_84557506
ES.19445.5	chr2	-	1279	3	NNC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.5	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTATGATTCTTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	84557591	84553467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84554562_84556400_84556501_84557506
ES.19445.6	chr2	-	1597	3	NNC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.5	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTATGATTCTTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	84557630	84553467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84554562_84556121_84556501_84557506
ES.19445.7	chr2	-	1419	3	NNC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	149	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTATGATTCTTTTT	NA	False	NA	-23	True	AATAAA	-15	NA	84557588	84553467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84554562_84556257_84556501_84557506
ES.19445.8	chr2	-	1195	2	FSM	ENSMUSG00000027079.16	ENSMUST00000138231.2	1208	2	11	2	11	-2	multi-exon	FALSE	canonical	2	16	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTGGTATGATTCTTT	NA	False	NA	-25	True	AATAAA	-13	NA	84557609	84553469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84554562_84557506
ES.19445.9	chr2	-	3155	2	NIC	ENSMUSG00000027079.16	novel	1912	3	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	299	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTGGTATGATTCTTT	NA	False	NA	-25	True	AATAAA	-13	NA	84557630	84553469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84556501_84557506
ES.19446.1	chr2	-	6158	1	Antisense	novelGene_ENSMUSG00000034059.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTTGGGGTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	84571457	84565299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_84565300_84571500
ES.19446.2	chr2	-	3012	1	Antisense	novelGene_ENSMUSG00000034059.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATAGTCCTATCTGCC	NA	False	NA	NA	False	NA	NA	NA	84571457	84568445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_84568400_84571500
ES.19446.3	chr2	-	1666	1	FSM	ENSMUSG00000065484.3	ENSMUST00000083550.3	64	1	7	-1609	7	1609	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCTCAAATGAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	84571515	84569849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84569800_84571500
ES.19447.1	chr2	-	805	2	FSM	ENSMUSG00000097187.2	ENSMUST00000181711.2	726	2	-82	3	-82	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACACTCTCCTGCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	84574081	84572515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84573045_84573805
ES.19447.2	chr2	-	620	2	FSM	ENSMUSG00000097187.2	ENSMUST00000181711.2	726	2	-101	207	-101	-207	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTACTGGGTAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	84574100	84572719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84573045_84573805
ES.19448.1	chr2	-	163	1	Intergenic	novelGene_16126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGGGATAAATT	NA	False	NA	NA	False	NA	NA	NA	84580124	84579961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84580000_84580100
ES.19449.1	chr2	+	167	1	Intergenic	novelGene_16127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAGAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	84582368	84582535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84582400_84582500
ES.1945.1	chr1	+	1835	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	70	3	-22	-3	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACAGCTCCACTTCAC	5492	False	NA	3	True	ATTAAA	-16	NA	172348680	172373434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ES.1945.2	chr1	+	2708	10	ISM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	82	3189	-10	2115	5prime_fragment	FALSE	canonical	3	18	junction_1	6.58280588604383	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGCCCTACTTTTG	5504	False	NA	NA	False	AATAAA	-14	NA	172348692	172370248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751
ES.1945.3	chr1	+	1570	2	NNC	ENSMUSG00000026546.17	novel	426	4	NA	NA	1	36	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTTTCCTCCAAATG	5515	False	NA	NA	False	NA	NA	NA	172348703	172351829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172348749_172350304
ES.1945.4	chr1	+	2035	13	NNC	ENSMUSG00000026546.17	novel	1908	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.3296728802241	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACAGCTCCACTTCAC	5521	False	NA	3	True	ATTAAA	-16	NA	172348709	172373434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172348749_172351555_172351785_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ES.1945.5	chr1	+	5552	12	NNC	ENSMUSG00000026546.17	novel	699	5	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	12.2999697641233	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGCTCCACTTCACTG	NA	False	NA	5	True	ATTAAA	-18	NA	172353594	172373436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_172353746_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172370648_172370728_172372884_172373241
ES.19450.2	chr2	-	1848	8	NNC	ENSMUSG00000023224.13	novel	1768	8	NA	NA	-3	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.2832356239197	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGTGTACTAGTTCC	NA	False	NA	0	True	AATAAA	-27	NA	84605751	84595704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600692_84601768_84601904_84603474_84603989_84605083_84605159_84605706
ES.19450.3	chr2	-	1268	6	NNC	ENSMUSG00000023224.13	novel	1768	8	NA	NA	285	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.9017083950044	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTCTGTGTACTAGT	NA	False	NA	-3	True	AATAAA	-24	NA	84605187	84595707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84605079
ES.19450.4	chr2	-	1784	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	7	-23	7	23	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCTCTGTGTACTAGT	NA	False	NA	-3	True	AATAAA	-24	NA	84605741	84595707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
ES.19450.5	chr2	-	5364	4	NIC	ENSMUSG00000023224.13	novel	1768	8	NA	NA	277	12	intron_retention	FALSE	canonical	3	93	junction_2	12.0277457017791	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCTCACTAGCCTC	NA	False	NA	-14	True	AATAAA	-13	NA	84605195	84595718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84596172_84597618_84601904_84603474_84603989_84605083
ES.19451.1	chr2	-	176	1	Intergenic	novelGene_16128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAGAAAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	84617037	84616861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84616900_84617000
ES.19452.1	chr2	+	1609	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	-224	175	-224	-175	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	84628947	84640345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ES.19452.2	chr2	+	1261	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	-7	306	-7	-306	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTTTTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	84629164	84640214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ES.19452.3	chr2	+	1374	4	NNC	ENSMUSG00000027078.15	novel	1560	4	NA	NA	15	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.3491470494753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	84629192	84640345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84629287_84633122_84633219_84636680_84636868_84639348
ES.19452.4	chr2	+	1536	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	24	0	18	0	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	False	NA	NA	False	GATAAA	-13	NA	84629195	84640520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ES.19452.5	chr2	+	1320	3	ISM	ENSMUSG00000027078.15	ENSMUST00000154709.2	1171	4	36	334	36	-175	5prime_fragment	FALSE	canonical	3	170	junction_2	20.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	84633082	84640345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84633219_84636680_84636868_84639348
ES.19452.6	chr2	+	157	1	Intergenic	novelGene_16129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAATAAACATAG	NA	False	NA	NA	False	NA	NA	NA	84634607	84634764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84634600_84634800
ES.19453.1	chr2	-	2064	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6391	-1055	6391	1055	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGACATGCCTATGA	4160	False	NA	NA	False	NA	NA	NA	84646605	84640464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
ES.19453.2	chr2	-	1105	3	NIC	ENSMUSG00000027077.8	novel	1761	8	NA	NA	6464	5	intron_retention	FALSE	canonical	3	109	junction_2	15	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCAGTTTGCCAGGTC	4233	False	NA	-14	True	AATAAA	-24	NA	84646532	84641514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84641884_84645634_84646066_84646227
ES.19453.5	chr2	-	2018	9	NNC	ENSMUSG00000027077.8	novel	1761	8	NA	NA	117	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.6597957226163	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATGTGTGGCAGTTTG	NA	False	NA	-21	True	AATAAA	-17	NA	84652879	84641521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321_84647368_84647467_84647601_84648619_84649255_84651281_84651658_84652836
ES.19454.1	chr2	+	678	3	NNC	ENSMUSG00000027076.11	novel	690	3	NA	NA	13	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	204	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTGAGAGTAAAGAGT	6430	False	NA	19	True	ATTAAA	-24	NA	84657353	84660566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84657492_84657950_84658058_84660133
ES.19454.2	chr2	+	685	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	16	-11	16	11	multi-exon	FALSE	canonical	3	373	junction_1	17.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAGAGTAAAGAGTCA	6433	False	NA	21	True	ATTAAA	-26	NA	84657356	84660568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84657492_84657942_84658058_84660133
ES.19454.3	chr2	+	3237	1	Genic_Genomic	ENSMUSG00000027076.11	novel	NA	NA	NA	NA	25	45	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATGCAGTGGGTCT	6442	False	NA	55	True	AGTAAA	-21	NA	84657365	84660602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_84657400_84660600
ES.19455.1	chr2	-	101	1	Intergenic	novelGene_16130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACGGAAAAAAAAAAA	9718	False	NA	NA	False	NA	NA	NA	84661016	84660915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84660900_84661000
ES.19456.1	chr2	-	167	1	Intergenic	novelGene_16131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAAAAAGGGGTGG	9532	False	NA	NA	False	NA	NA	NA	84661202	84661035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84661000_84661200
ES.19457.1	chr2	+	2413	15	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	18.8209880674936	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTGTGTATCTGTGA	NA	False	NA	14	True	AATAAA	-16	NA	84669698	84693927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.10	chr2	+	2382	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-1	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	25.4725748797784	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGGAAATGAAA	NA	False	NA	-8	True	NA	NA	NA	84669759	84693905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84693226
ES.19457.11	chr2	+	1880	14	NNC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-1	4375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	25.4725748797784	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCGACCTGCTGGATG	NA	False	NA	NA	False	AATACA	-14	NA	84669759	84698313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84698136
ES.19457.12	chr2	+	2552	15	NNC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	25.417031892101	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	NA	False	NA	9	True	AATAAA	-11	NA	84669759	84693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691873_84693226
ES.19457.13	chr2	+	4772	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	43	junction_1	14.932590147751	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCTGGCTGGTGTGTA	NA	False	NA	7	True	AATAAA	-9	NA	84669759	84693920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.14	chr2	+	3731	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	43	junction_1	14.568345355274	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCTGGCTGGTGTGTA	NA	False	NA	7	True	AATAAA	-9	NA	84669761	84693920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84691844_84693226
ES.19457.15	chr2	+	3327	13	NIC	ENSMUSG00000027075.17	novel	2539	15	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_12	26.5010481972988	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTGTGTATCTGTGA	NA	False	NA	14	True	AATAAA	-16	NA	84669761	84693927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84693226
ES.19457.16	chr2	+	3001	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	-523	9	-97	-1	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	210	False	NA	16	True	AATAAA	-18	NA	84670445	84693929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.17	chr2	+	2547	15	NNC	ENSMUSG00000027075.17	novel	2556	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.2514222145162	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	311	False	NA	9	True	AATAAA	-11	NA	84670546	84693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690034_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.18	chr2	+	2908	14	NNC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_6	24.7971653275939	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	316	False	NA	9	True	AATAAA	-11	NA	84670551	84693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684910_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.19	chr2	+	2524	16	NNC	ENSMUSG00000027075.17	novel	2556	15	NA	NA	54	48072	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.889942432513	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATCGATTTGCTTTC	361	False	NA	NA	False	NA	NA	NA	84670596	84742010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226_84693927_84741989
ES.19457.2	chr2	+	2551	15	NNC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8998761844628	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATCTGGCTGGTGTGT	NA	False	NA	6	True	AATAAA	-8	NA	84669709	84693919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670007_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.20	chr2	+	2410	15	NNC	ENSMUSG00000027075.17	novel	2556	15	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.7935118825511	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	468	False	NA	9	True	AATAAA	-11	NA	84670703	84693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684737_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.21	chr2	+	3361	13	NIC	ENSMUSG00000027075.17	novel	2487	14	NA	NA	33	-2	intron_retention	FALSE	canonical	3	65	junction_5	11.5334657988539	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCTGGCTGGTGTGTA	766	False	NA	7	True	AATAAA	-9	NA	84671001	84693920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.22	chr2	+	5000	1	Intergenic	novelGene_16133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGGGGAAGGGGAAGG	NA	False	NA	NA	False	TATAAA	-35	NA	84721510	84726510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84721500_84726500
ES.19457.3	chr2	+	2212	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-28	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.297953258338	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGGAAATGAAA	NA	False	NA	-8	True	NA	NA	NA	84669710	84693905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84669850_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.4	chr2	+	2579	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	-41	1	-28	-1	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	NA	False	NA	16	True	AATAAA	-18	NA	84669710	84693929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.5	chr2	+	3773	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-22	0	intron_retention	FALSE	canonical	3	23	junction_1	19.5311918638188	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCTGGTGTGTATC	NA	False	NA	9	True	AATAAA	-11	NA	84669716	84693922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719
ES.19457.6	chr2	+	3496	14	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	43	junction_1	15.4214942598667	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGTATCTGTGACT	NA	False	NA	16	True	AATAAA	-18	NA	84669718	84693929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ES.19457.7	chr2	+	2219	12	NIC	ENSMUSG00000027075.17	novel	3089	15	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	25.1990423535735	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCTGGCTGGTGTGTA	NA	False	NA	7	True	AATAAA	-9	NA	84669721	84693920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84693226
ES.19457.8	chr2	+	4974	13	NNC	ENSMUSG00000027075.17	novel	3927	13	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_7	28.8111668165892	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTGTGTATCTGTGA	NA	False	NA	14	True	AATAAA	-16	NA	84669752	84693927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84669850_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684910_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433
ES.19458.1	chr2	-	1895	1	Antisense	novelGene_ENSMUSG00000027075.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	8291	False	NA	NA	False	NA	NA	NA	84670552	84668657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_84668700_84670600
ES.19458.2	chr2	-	1229	1	Antisense	novelGene_ENSMUSG00000027075.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTTGTCATTATTTCGC	8421	False	NA	NA	False	NA	NA	NA	84670422	84669193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_84669200_84670400
ES.19459.1	chr2	-	165	1	Intergenic	novelGene_16132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	408	False	NA	NA	False	NA	NA	NA	84678435	84678270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84678300_84678400
ES.1946.1	chr1	-	186	1	ISM	ENSMUSG00000085184.10	ENSMUST00000132370.9	599	3	12342	9	12342	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAATGGACAATAAG	NA	False	NA	NA	False	NA	NA	NA	172365894	172365708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_172365700_172365900
ES.19460.1	chr2	-	2221	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	-295	-623	-295	623	multi-exon	FALSE	canonical	1	1	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTTTTTTGTTGTTT	9918	False	NA	NA	False	ATTAAA	-25	NA	84717349	84701644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84703040_84710731_84711214_84717005
ES.19461.1	chr2	+	2628	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	-45	0	2	0	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	9	True	AATAAA	-20	NA	84766962	84788853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ES.19461.2	chr2	+	2484	14	NNC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.0977147839704	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGCTTCTACCTCTT	NA	False	NA	7	True	AATAAA	-18	NA	84766969	84788851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324_84771372_84772918_84772989_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ES.19461.3	chr2	+	693	4	NIC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	9	2847	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	16.391054470859	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTCTCCTGTGGGGT	NA	False	NA	NA	False	NA	NA	NA	84766969	84771521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324
ES.19461.4	chr2	+	2569	13	NIC	ENSMUSG00000027074.15	novel	2583	13	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.5708587898787	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTACTGCTTCTACCTC	NA	False	NA	5	True	AATAAA	-16	NA	84766978	84788849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84767194_84767905_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ES.19461.7	chr2	+	2552	13	NNC	ENSMUSG00000027074.15	novel	2583	13	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7999485595483	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGCTTCTACCTCTT	NA	False	NA	7	True	AATAAA	-18	NA	84767072	84788851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84767194_84767830_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ES.19461.8	chr2	+	6237	11	NNC	ENSMUSG00000027074.15	novel	2583	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	1	junction_7	10.9731490466502	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTACTGCTTCTACCTC	NA	False	NA	5	True	AATAAA	-16	NA	84767232	84788849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84768214_84768566_84768697_84771324_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780768_84780885_84785774_84785962_84786615_84786731_84788029
ES.19462.1	chr2	+	173	1	Intergenic	novelGene_16134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGCCAGGTATGAGA	NA	False	NA	NA	False	NA	NA	NA	84838426	84838599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_84838400_84838600
ES.19463.1	chr2	-	3866	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	-13	-2041	-13	2041	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTTCTCTCTCAAGAC	NA	False	NA	NA	False	AATAGA	-25	NA	84865844	84826885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
ES.19463.2	chr2	-	4249	14	NNC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	56	2030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.90847611803288	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTGGAATCTATGTTC	NA	False	NA	NA	False	AATAGA	-14	NA	84863598	84826896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84856975_84857409_84862864_84862892_84863344
ES.19463.3	chr2	-	3689	13	NIC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	52	1899	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	7.59751421336099	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTGTGGTTTACTCA	NA	False	NA	NA	False	NA	NA	NA	84863602	84827027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84862864_84862892_84863344
ES.19463.4	chr2	-	5329	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	-1619	-1898	356	1898	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTGTGGTTTACTC	NA	False	NA	NA	False	NA	NA	NA	84867450	84827028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
ES.19463.5	chr2	-	5711	12	NNC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	4250	1893	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	7.57333294533037	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATATACTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	84859288	84827033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84856975
ES.19463.6	chr2	-	4078	14	NNC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	-26	1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.90847611803288	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATATACTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	84863564	84827033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84856975_84857409_84862864_84862892_84863344
ES.19463.7	chr2	-	1802	13	NIC	ENSMUSG00000027071.15	novel	1812	12	NA	NA	56	16	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	7.59751421336099	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTGTCAGTTGCCTT	NA	False	NA	NA	False	AATGAA	-17	NA	84863598	84828910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84862864_84862892_84863344
ES.19463.8	chr2	-	1839	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	-13	-14	-13	14	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCTGTGTCAGTTGCC	NA	False	NA	NA	False	AATGAA	-15	NA	84865844	84828912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
ES.19463.9	chr2	-	3007	1	NIC	ENSMUSG00000027071.15	novel	412	3	NA	NA	-12	1854	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTATTGCAAGAGTGA	NA	False	NA	NA	False	AATGAA	-35	NA	84863550	84860543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_84860500_84863600
ES.19464.1	chr2	+	2812	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-68	-5	-68	5	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTCTCCTTTCCCA	NA	False	NA	28	True	AATAAA	-24	NA	84867509	84877458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.10	chr2	+	2601	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	414.213224747298	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867526	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.11	chr2	+	7195	11	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-49	2	intron_retention	FALSE	canonical	3	1260	junction_4	135.189533618546	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867528	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.12	chr2	+	4101	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-48	0	intron_retention	FALSE	canonical	3	1260	junction_7	143.632803433694	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867529	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.15	chr2	+	7767	10	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-46	0	intron_retention	FALSE	canonical	3	1260	junction_5	141.175313478676	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867531	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.16	chr2	+	4762	14	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-46	1	intron_retention	FALSE	canonical	3	1260	junction_6	151.40599442535	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867531	84877451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.17	chr2	+	4780	14	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-46	-2	intron_retention	FALSE	canonical	1	1	junction_3	443.61269690133	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGATGTCCTTATGTC	NA	False	NA	18	True	AATAAA	-14	NA	84867531	84877448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84870800_84870902_84871131_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.18	chr2	+	2762	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	401.76006812991	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACGATGTCCTTATGT	NA	False	NA	17	True	AATAAA	-13	NA	84867531	84877447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873350_84874683_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.19	chr2	+	4228	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-46	2	intron_retention	FALSE	canonical	3	1260	junction_7	121.080762387789	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867531	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.2	chr2	+	2822	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	394.966251525051	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867512	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868119_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.23	chr2	+	2866	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	0	intron_retention	FALSE	canonical	3	1317	junction_1	120.832225282276	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867532	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.25	chr2	+	4030	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	0	intron_retention	FALSE	canonical	3	1260	junction_6	149.654585288788	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867532	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.26	chr2	+	4711	12	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	0	intron_retention	FALSE	canonical	3	1260	junction_4	164.46210847477	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867532	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868883_84870217_84871134_84871262_84871367_84871451_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.27	chr2	+	3070	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	1	intron_retention	FALSE	canonical	3	1260	junction_6	144.857569893864	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	24	True	AATAAA	-20	NA	84867532	84877454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.28	chr2	+	5352	13	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	3	intron_retention	FALSE	canonical	3	1260	junction_6	155.015657811289	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTATGTCTCCTTTCC	NA	False	NA	26	True	AATAAA	-22	NA	84867532	84877456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.29	chr2	+	2731	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.31777221961	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867532	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868187_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.3	chr2	+	2434	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-63	368	-63	23	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTCTCTCACATAGTCC	NA	False	NA	NA	False	AATAAA	-27	NA	84867514	84877085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.31	chr2	+	2799	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	400.220544668811	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867532	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876974
ES.19464.32	chr2	+	2602	16	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	400.331673601888	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGATGTCCTTATGTC	NA	False	NA	18	True	AATAAA	-14	NA	84867533	84877448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873137_84874753_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.34	chr2	+	1715	12	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	-42	4133	-42	667	5prime_fragment	FALSE	canonical	3	1260	junction_7	158.166091172205	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGAAGATGTGGCA	NA	False	NA	NA	False	NA	NA	NA	84867535	84873320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299
ES.19464.39	chr2	+	3732	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-35	0	intron_retention	FALSE	canonical	3	1260	junction_7	144.978711080857	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867542	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.40	chr2	+	4344	14	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-35	0	intron_retention	FALSE	canonical	3	1260	junction_6	125.651014778206	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867542	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.41	chr2	+	5061	11	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-34	0	intron_retention	FALSE	canonical	3	1317	junction_1	103.419969058205	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867543	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84871134_84871262_84871581_84871778_84872001_84872586_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.42	chr2	+	2761	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.254169544051	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867544	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870805_84870914_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.43	chr2	+	2760	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.254169544051	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGATGTCCTTATGTC	NA	False	NA	18	True	AATAAA	-14	NA	84867545	84877448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870794_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.44	chr2	+	3995	13	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	1260	junction_5	156.744550676145	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867560	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84872001_84872586_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.45	chr2	+	4357	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1260	junction_6	148.318758360609	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867561	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.46	chr2	+	8002	9	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1260	junction_3	123.800242326096	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867561	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.47	chr2	+	3235	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1260	junction_6	149.936585234681	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867561	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.48	chr2	+	2673	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_4	397.034470913736	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867561	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870686_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.5	chr2	+	5561	13	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-59	2	intron_retention	FALSE	canonical	3	1260	junction_6	159.721806762745	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867518	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84872001_84872586_84872660_84873036_84873176_84873299_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.50	chr2	+	2715	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_4	396.128801456988	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867561	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870644_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.52	chr2	+	5811	13	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1260	junction_5	156.142807675822	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867561	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.53	chr2	+	3413	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1260	junction_6	147.835333105066	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867565	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.54	chr2	+	2740	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	400.187295017908	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867566	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875759_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.55	chr2	+	3419	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-11	1	intron_retention	FALSE	canonical	3	1260	junction_5	147.692333958822	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	24	True	AATAAA	-20	NA	84867566	84877454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.56	chr2	+	2855	18	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	522.300129815738	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867567	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84869573_84869680_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.57	chr2	+	2555	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	412.770767698812	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867582	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.6	chr2	+	2782	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	392.719638984034	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867519	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868299_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.60	chr2	+	4521	14	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	33	0	intron_retention	FALSE	canonical	3	1260	junction_7	120.716843120659	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867610	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.61	chr2	+	3075	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	401.76006812991	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867635	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874268_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.62	chr2	+	3105	16	ISM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	102	-3	102	3	3prime_fragment	FALSE	canonical	3	1260	junction_6	129.702223059848	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTATGTCTCCTTTCC	NA	False	NA	26	True	AATAAA	-22	NA	84867679	84877456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.63	chr2	+	3285	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1260	junction_5	133.25870573085	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867781	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.64	chr2	+	2735	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	-9	-5	-9	2	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867785	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.65	chr2	+	2536	16	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	531.595042197431	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATGTCCTTATGTCTCC	NA	False	NA	21	True	AATAAA	-17	NA	84867794	84877451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867875_84868137_84868314_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.66	chr2	+	2973	16	NNC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	38	junction_1	403.769318079299	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	24	True	AATAAA	-20	NA	84867794	84877454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84868299_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.67	chr2	+	3102	16	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	121	junction_1	384.18812521414	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867799	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867875_84868137_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.68	chr2	+	3626	14	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	16	0	intron_retention	FALSE	canonical	3	1260	junction_5	136.693108521095	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867814	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.7	chr2	+	2963	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	404.06324922591	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867520	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870437_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.70	chr2	+	2860	17	NNC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	398.410415746125	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867816	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84868031_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.72	chr2	+	6104	10	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	21	-1	intron_retention	FALSE	canonical	3	1260	junction_4	155.393248657704	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867819	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.74	chr2	+	3060	16	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	37	0	intron_retention	FALSE	canonical	3	121	junction_1	384.282303637429	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867835	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.75	chr2	+	4769	12	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	38	0	intron_retention	FALSE	canonical	3	1260	junction_4	148.288695422418	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867836	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.76	chr2	+	6265	12	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	38	0	intron_retention	FALSE	canonical	3	1260	junction_3	145.914726597477	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867836	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.77	chr2	+	3070	15	NIC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	38	1	intron_retention	FALSE	canonical	3	1260	junction_6	107.647857500694	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTATGTCTCCTTT	NA	False	NA	24	True	AATAAA	-20	NA	84867836	84877454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.79	chr2	+	3021	17	NNC	ENSMUSG00000027067.17	novel	2721	17	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_3	538.117780874921	1156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGATGTCCTTATGTCT	NA	False	NA	19	True	AATAAA	-15	NA	84867862	84877449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84868314_84868696_84868883_84869573_84869680_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.8	chr2	+	5075	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-56	2	intron_retention	FALSE	canonical	3	1260	junction_7	148.222254518995	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTATGTCTCCTTTC	NA	False	NA	25	True	AATAAA	-21	NA	84867521	84877455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.81	chr2	+	3678	15	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	188	0	intron_retention	FALSE	canonical	3	1260	junction_6	134.140498990379	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84868064	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.83	chr2	+	4497	11	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	-479	-2	intron_retention	FALSE	canonical	3	1260	junction_3	150.761268235578	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGATGTCCTTATGTC	NA	False	NA	18	True	AATAAA	-14	NA	84869976	84877448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.84	chr2	+	2283	14	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	2422	-3	-239	0	3prime_fragment	FALSE	canonical	3	1260	junction_4	136.458242957345	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84870216	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ES.19464.85	chr2	+	5765	1	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	168	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84871685	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84871700_84877400
ES.19464.86	chr2	+	1318	10	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	332	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	526.158779959429	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACGATGTCCTTATGT	NA	False	NA	17	True	AATAAA	-13	NA	84871849	84877447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989_84877255_84877380
ES.19464.87	chr2	+	3341	3	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	1717	0	intron_retention	FALSE	canonical	0	0	junction_1	846	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84873234	84877453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84875925_84876596_84876784_84876989
ES.19464.88	chr2	+	1620	3	ISM	ENSMUSG00000027067.17	ENSMUST00000145097.2	679	4	-347	-388	-347	0	intron_retention	FALSE	canonical	3	1589	junction_1	22.5	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84875247	84877450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84875925_84876027_84876117_84876596
ES.19465.1	chr2	+	5817	12	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-52	5	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	44.7158152361265	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTGGTGTGTGTGTGT	NA	False	NA	17	True	AATAAA	-26	NA	84878313	84903397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.10	chr2	+	3703	10	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-7	-3	intron_retention	FALSE	canonical	2	9	junction_5	89.3146746683383	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATTGGGGTTGTCCAGG	NA	False	NA	-1	True	AATAAA	-8	NA	84878391	84903379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.12	chr2	+	5410	13	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.3205954846401	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGGGTTGTCCAGGAT	NA	False	NA	1	True	AATAAA	-10	NA	84878392	84903381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84888695_84889006_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.13	chr2	+	5741	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	88.0508868648462	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCCAGGATTGTGG	NA	False	NA	6	True	AATAAA	-15	NA	84878392	84903386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884715_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.14	chr2	+	5480	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-6	17697	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	84.5209153048341	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-12	NA	84878392	84921089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84920886
ES.19465.16	chr2	+	6899	6	NIC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	-5	3939	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	24.7030362506312	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCGATTTCCTTTGTAT	NA	False	NA	NA	False	AATAAA	-33	NA	84878393	84896868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231
ES.19465.18	chr2	+	4071	7	NNC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	68.1625915652339	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCCAGGATTGTGG	NA	False	NA	6	True	AATAAA	-15	NA	84878394	84903386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84893959_84903303
ES.19465.20	chr2	+	3760	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	88.4394549399907	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTTGTCCAGGATTGT	NA	False	NA	4	True	AATAAA	-13	NA	84878402	84903384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84889946_84890121_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.21	chr2	+	4562	7	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	6	4261	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	67.811011888434	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTCCTGTATTTTTAT	NA	False	NA	NA	False	AAAACA	-15	NA	84878404	84897190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84897008
ES.19465.22	chr2	+	6062	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	14	30941	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.9907726535484	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATTGATTGATTGATTG	NA	False	NA	NA	False	CATAAA	-14	NA	84878412	84934333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84933532
ES.19465.27	chr2	+	5870	13	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	89.5623231176047	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGGTTGTCCAGGATTG	NA	False	NA	3	True	AATAAA	-12	NA	84878420	84903383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84889946_84890121_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.28	chr2	+	6461	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	173	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.8451585279396	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTTGTCCAGGATTGT	NA	False	NA	4	True	AATAAA	-13	NA	84878571	84903384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84879395_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.29	chr2	+	6257	6	NNC	ENSMUSG00000033955.14	novel	1214	4	NA	NA	173	2560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.4795273884039	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACATGGTTTCCATAGC	NA	False	NA	NA	False	NA	NA	NA	84878571	84895489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84879395_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231
ES.19465.3	chr2	+	6172	8	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	9	junction_4	84.9013833689368	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGTCCAGGATTGTGG	NA	False	NA	6	True	AATAAA	-15	NA	84878356	84903386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84882268_84884697_84888469_84889832_84900331_84900702_84900950_84902208_84902439_84902513_84902940
ES.19465.30	chr2	+	3585	11	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	918	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.7374789392077	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGTTGTCCAGGATT	NA	False	NA	2	True	AATAAA	-11	NA	84879316	84903382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84879395_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.31	chr2	+	5772	12	FSM	ENSMUSG00000033955.14	ENSMUST00000111605.9	5747	12	-28	3	-28	1	multi-exon	FALSE	canonical	2	4	junction_1	72.8463797406729	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84880775	84903389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_84880905_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.32	chr2	+	3724	8	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	760	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.639530026803	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGTTGTCCAGGATT	NA	False	NA	2	True	AATAAA	-11	NA	84889262	84903382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84889832_84892231_84894101_84900376_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.33	chr2	+	3759	8	NIC	ENSMUSG00000033955.14	novel	939	2	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	87.5295868345588	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGTTGTCCAGGATT	NA	False	NA	2	True	AATAAA	-11	NA	84891249	84903382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84891549_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.34	chr2	+	2143	1	NIC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	1138	1659	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGCTTTCTCAATGC	NA	False	NA	NA	False	NA	NA	NA	84892445	84894588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84892400_84894600
ES.19465.35	chr2	+	5954	6	ISM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	7213	3	4408	1	3prime_fragment	FALSE	canonical	3	230	junction_3	18.4390889145858	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCAGGATTGTGGTGT	NA	False	NA	9	True	AATAAA	-18	NA	84895715	84903389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.36	chr2	+	3832	6	NNC	ENSMUSG00000033955.14	novel	4799	8	NA	NA	6607	30662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.262379820125	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTTGGCGGCGTTTGG	NA	False	NA	NA	False	NA	NA	NA	84897914	84934054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84900706_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84933532
ES.19465.4	chr2	+	5558	6	NIC	ENSMUSG00000033955.14	novel	4199	6	NA	NA	-9	2561	combination_of_known_splicesites	FALSE	canonical	3	133	junction_1	24.7030362506312	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGGTTTCCATAGCT	NA	False	NA	NA	False	NA	NA	NA	84878356	84895490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231
ES.19465.6	chr2	+	5118	11	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	79.4206522259796	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTTGTCCAGGATTGT	NA	False	NA	4	True	AATAAA	-13	NA	84878368	84903384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.7	chr2	+	3623	11	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	74.1261762132649	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCAGGATTGTGGTG	NA	False	NA	8	True	AATAAA	-17	NA	84878369	84903388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ES.19465.9	chr2	+	5806	12	NNC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	-11	30664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	84.7156644408393	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGGCGGCGTTTGGTA	NA	False	NA	NA	False	NA	NA	NA	84878387	84934056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_84878480_84881208_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84933532
ES.19466.1	chr2	-	6239	1	Intergenic	novelGene_16135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGACCAACATCACTGA	NA	False	NA	NA	False	NA	NA	NA	84915117	84908878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_84908900_84915100
ES.19467.1	chr2	-	173	1	Intergenic	novelGene_16136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACGTTT	NA	False	NA	NA	False	NA	NA	NA	85112013	85111840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_85111800_85112000
ES.19468.1	chr2	-	177	1	Intergenic	novelGene_16137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATATATATGTTT	NA	False	NA	NA	False	NA	NA	NA	85492776	85492599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_85492600_85492800
ES.19469.1	chr2	+	1951	3	Intergenic	novelGene_16138	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTCACCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	86196300	86200392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_86196419_86197523_86197561_86198596
ES.1947.1	chr1	+	177	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGTTACAGA	971	False	NA	NA	False	NA	NA	NA	172436276	172436453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_172436300_172436500
ES.19470.1	chr2	-	1135	1	Intergenic	novelGene_16139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	86197747	86196612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_86196600_86197700
ES.19471.1	chr2	+	159	1	Intergenic	novelGene_16140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	87319237	87319396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_87319200_87319400
ES.19472.1	chr2	-	2213	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-73	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	7.40870359029762	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	87327510	87319424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_87320426_87321167_87321750_87322478_87322789_87327190
ES.19472.2	chr2	-	1909	4	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	11.1455023315337	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	87327461	87319428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_87320426_87321167_87321750_87322478_87322538_87327190
ES.19472.3	chr2	-	2355	5	NNC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-73	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0445719051881	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	87327510	87319428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_87320426_87321167_87321750_87322478_87322789_87325556_87325703_87327190
ES.19472.4	chr2	-	1629	3	NIC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	9.5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	87327240	87319428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_87320426_87321167_87321750_87327190
ES.19472.6	chr2	-	3581	4	NNC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.490737563232	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-9	True	AATAAA	-14	NA	87327252	87319432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_87320426_87321167_87321750_87322478_87322789_87325556
ES.19472.7	chr2	-	2791	5	NNC	ENSMUSG00000025839.4	novel	1861	3	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0445719051881	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-9	True	AATAAA	-14	NA	87327441	87319432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_87320426_87321167_87321750_87322478_87322789_87325047_87325703_87327190
ES.19472.8	chr2	-	2799	2	ISM	ENSMUSG00000025839.4	ENSMUST00000026957.4	1861	3	-211	2	-211	-2	intron_retention	FALSE	canonical	3	30	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-9	True	AATAAA	-14	NA	87322973	87319432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_87320426_87321167
ES.19472.9	chr2	-	2095	1	NIC	ENSMUSG00000025839.4	novel	675	2	NA	NA	-38	-3723	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGCAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	87327281	87325186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_87325200_87327300
ES.19473.1	chr2	+	1670	4	NIC	ENSMUSG00000025838.13	novel	1540	3	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACCAGTGCATCTCCAT	NA	False	NA	NA	False	NA	NA	NA	87336876	87341215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_87336974_87338774_87339089_87339524_87340113_87340544
ES.19473.2	chr2	+	1717	5	NIC	ENSMUSG00000025838.13	novel	644	4	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.06155281280883	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGTGCATCTCCATCA	NA	False	NA	NA	False	NA	NA	NA	87336895	87341217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_87336974_87337417_87337482_87338774_87339089_87339524_87340113_87340544
ES.19473.3	chr2	+	3601	5	NNC	ENSMUSG00000025838.13	novel	1540	3	NA	NA	394	3667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2.27760839478607	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTTCTGGATAATATA	NA	False	NA	NA	False	AATAAA	-17	NA	87337320	87344883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_87337482_87338774_87339089_87339524_87340113_87340544_87341017_87342817
ES.19473.4	chr2	+	1734	4	NIC	ENSMUSG00000025838.13	novel	1540	3	NA	NA	396	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGTGCATCTCCATCA	NA	False	NA	NA	False	NA	NA	NA	87337322	87341217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_87337482_87338774_87339089_87339524_87340113_87340544
ES.19474.1	chr2	-	176	1	Intergenic	novelGene_16141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	87353264	87353088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_87353100_87353300
ES.19475.1	chr2	-	228	1	FSM	ENSMUSG00000083267.3	ENSMUST00000119555.3	892	1	874	-210	874	210	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAATTTCAGATATACA	NA	False	NA	NA	False	AAGAAA	-34	NA	87353843	87353615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_87353600_87353800
ES.19476.1	chr2	-	214	1	Intergenic	novelGene_16142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAATAGATAGATAGAT	NA	False	NA	NA	False	NA	NA	NA	87355891	87355677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_87355700_87355900
ES.19477.1	chr2	+	750	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-116	-381	-116	381	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	AATAAA	-43	NA	87356372	87357122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_87356400_87357100
ES.19477.10	chr2	+	211	1	Intergenic	novelGene_16144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	87371775	87371986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_87371800_87372000
ES.19477.11	chr2	+	177	1	Intergenic	novelGene_16146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	87456542	87456719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_87456500_87456700
ES.19477.2	chr2	+	677	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-110	381	multi-exon	FALSE	canonical	1	11	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	AATAAA	-43	NA	87356378	87357122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_87356560_87356626
ES.19477.3	chr2	+	6279	3	Fusion	ENSMUSG00000062272.5_ENSMUSG00000082908.5	novel	2255	2	NA	NA	-109	-1580	multi-exon	FALSE	canonical	0	0	junction_2	0.5	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTAATCATACAAGATT	NA	False	NA	NA	False	AATAAA	-14	NA	87356379	87404794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_87356560_87372798_87372937_87398833
ES.19477.4	chr2	+	580	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-101	-226	-101	226	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATGTTGGGCAAATAT	NA	False	NA	NA	False	AATAAA	-26	NA	87356387	87356967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_87356400_87357000
ES.19477.5	chr2	+	2882	3	Genic_Genomic	ENSMUSG00000061520.5_ENSMUSG00000082908.5	novel	1258	1	NA	NA	-96	1545	multi-exon	FALSE	canonical	1	2	junction_2	3	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCTGTGTATTTGTC	NA	False	NA	3	True	AATAAA	-17	NA	87356392	87364942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_87356560_87360645_87360784_87362365
ES.19477.6	chr2	+	481	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-86	225	multi-exon	FALSE	canonical	3	135	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATGTTGGGCAAATA	NA	False	NA	NA	False	AATAAA	-25	NA	87356402	87356966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_87356560_87356642
ES.19477.7	chr2	+	617	2	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-66	381	multi-exon	FALSE	canonical	3	135	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	AATAAA	-43	NA	87356422	87357122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_87356560_87356642
ES.19477.8	chr2	+	1465	4	Genic_Genomic	ENSMUSG00000082908.5	novel	253	1	NA	NA	-24	136397	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTTTGTCATTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	87356464	87493138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_87356560_87372798_87372937_87430881_87431023_87492047
ES.19477.9	chr2	+	3439	1	Intergenic	novelGene_16143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATAATTAATGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	87358522	87361961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_87358500_87362000
ES.19478.1	chr2	-	237	1	Intergenic	novelGene_16145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTAAGTATAGCTCC	NA	False	NA	NA	False	NA	NA	NA	87395916	87395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_87395700_87395900
ES.19479.1	chr2	+	177	1	Intergenic	novelGene_16147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87551964	87552141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_87552000_87552100
ES.1948.1	chr1	-	832	2	FSM	ENSMUSG00000026544.7	ENSMUST00000027826.7	1410	2	-52	630	-52	-630	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	AATACA	-18	NA	172460581	172458960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_172459394_172460182
ES.19480.1	chr2	-	179	1	Intergenic	novelGene_16148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTATAGTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	87649963	87649784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_87649800_87650000
ES.19481.1	chr2	+	180	1	Intergenic	novelGene_16149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTGACTTGCA	6464	False	NA	NA	False	NA	NA	NA	88247868	88248048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_88247900_88248000
ES.19482.1	chr2	+	211	1	Intergenic	novelGene_16150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCAAGTTTAGGCATTA	NA	False	NA	NA	False	NA	NA	NA	88836586	88836797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_88836600_88836800
ES.19483.1	chr2	-	3044	3	NNC	ENSMUSG00000068806.6	novel	4325	3	NA	NA	-1132	-1136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89780140	89774663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_89777392_89778503_89778719_89780039
ES.19484.1	chr2	+	550	1	FSM	ENSMUSG00000091703.3	ENSMUST00000165784.3	470	1	0	-80	0	80	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAATCTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	89978762	89979312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_89978800_89979300
ES.19485.1	chr2	+	2520	3	ISM	ENSMUSG00000080223.3	ENSMUST00000116469.3	929	6	-1125	15845	-1125	-15845	5prime_fragment	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	90003315	90009651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90004562_90007737_90007899_90008538
ES.19486.1	chr2	-	179	1	Intergenic	novelGene_16151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	90004068	90003889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90003900_90004100
ES.19487.1	chr2	+	2930	1	Intergenic	novelGene_16152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	90012872	90015802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90012900_90015800
ES.19488.1	chr2	+	180	1	Intergenic	novelGene_16153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	90203311	90203491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90203300_90203500
ES.19489.1	chr2	-	1964	3	ISM	ENSMUSG00000085547.5	ENSMUST00000124074.3	876	7	9438	9773	9438	-9773	internal_fragment	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	90204067	90198287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_90198843_90199482_90199644_90202819
ES.1949.1	chr1	-	176	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAAAAAAAAGAGCT	8129	False	NA	NA	False	NA	NA	NA	172493487	172493311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_172493300_172493500
ES.19490.1	chr2	+	6819	2	Antisense	novelGene_ENSMUSG00000025314.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCAGACTCACAAGAGG	NA	False	NA	NA	False	NA	NA	NA	90272360	90279270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_90276639_90276729
ES.19491.1	chr2	+	2327	4	Antisense	novelGene_ENSMUSG00000025314.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAACTCTCCAGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	90284273	90291287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_90285569_90288481_90288773_90289785_90290058_90290818
ES.19491.2	chr2	+	3088	1	Antisense	novelGene_ENSMUSG00000025314.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAACTCTCCAGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	90288199	90291287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_90288200_90291300
ES.19492.1	chr2	+	8384	1	Intergenic	novelGene_16155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCAGATTTCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	90362798	90371182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90362800_90371200
ES.19493.1	chr2	-	3082	3	NNC	ENSMUSG00000025314.17	novel	513	2	NA	NA	-3727	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	90264516	90260160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90260391_90260569_90260654_90261748
ES.19493.10	chr2	-	4388	7	NNC	ENSMUSG00000025314.17	novel	7124	22	NA	NA	-16915	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	26.3991792801721	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTCGATTGATTC	NA	False	NA	NA	False	TATAAA	-14	NA	90277704	90263233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90277621
ES.19493.11	chr2	-	2501	4	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7556757682529	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTCGATTGATTC	NA	False	NA	NA	False	TATAAA	-14	NA	90410918	90263233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90264901_90299959_90300106_90301436_90301680_90410473
ES.19493.15	chr2	-	7590	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.9981942790822	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTATGTCTTCGATTG	NA	False	NA	NA	False	TATAAA	-10	NA	90410964	90263237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276620_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298810_90299877_90300104_90301436_90301680_90410473
ES.19493.16	chr2	-	4500	23	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.0350523412393	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATTATGTCTTCGATT	NA	False	NA	NA	False	TATAAA	-9	NA	90410990	90263238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90263578_90266706_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.17	chr2	-	7587	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	17	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.2508747061949	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATAAAAATATGTCAAC	NA	False	NA	NA	False	TTTAAA	-15	NA	90410974	90263255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270328_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.18	chr2	-	5900	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	77	-1659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTGTAGTGCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	90410914	90264891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.2	chr2	-	1325	1	Intergenic	novelGene_16154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTCGGAAAAAAAGACACAT	NA	False	NA	NA	False	NA	NA	NA	90262747	90261422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90261400_90262700
ES.19493.20	chr2	-	5578	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	29	-2029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTGTGTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	90410962	90265261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.21	chr2	-	5206	21	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	186	-2031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.1174210893288	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGATTTGTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	90410805	90265263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90299877_90300106_90301436_90301680_90410473
ES.19493.22	chr2	-	5531	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	59	-2034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.1917115525034	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACAAGATTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	90410932	90265266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301694_90410499
ES.19493.23	chr2	-	5568	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	19	-2035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGACAAGATTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	90410972	90265267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410487
ES.19493.24	chr2	-	5015	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	52	-2569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCTCCTCCTTTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	90410939	90265801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.25	chr2	-	4652	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	63	-2921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCAGTAGATGTCTCT	NA	False	NA	NA	False	NA	NA	NA	90410928	90266153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.26	chr2	-	4124	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	304	-3213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.4240231352348	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTGTTCTCCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	90410687	90266445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266915_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298810_90299877_90300106_90301436_90301680_90410473
ES.19493.28	chr2	-	4808	21	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	-5	-6121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.6109194360659	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGTTAGTTTGGTCTT	NA	False	NA	NA	False	ATTAAA	-3	NA	90410996	90269353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.29	chr2	-	2763	1	Intergenic	novelGene_16156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAGAAAAAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	90381225	90378462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90378500_90381200
ES.19493.3	chr2	-	8629	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	52	1045	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTATGTCCAAGTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	90410939	90262187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.30	chr2	-	237	1	Intergenic	novelGene_16157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGATCAGACCCA	5012	False	NA	NA	False	NA	NA	NA	90390169	90389932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90389900_90390200
ES.19493.31	chr2	-	4528	1	Intergenic	novelGene_16158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTGGGACAGATGGTCT	NA	False	NA	NA	False	ACTAAA	-13	NA	90403105	90398577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90398600_90403100
ES.19493.32	chr2	-	708	1	Intergenic	novelGene_16159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	90403010	90402302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90402300_90403000
ES.19493.4	chr2	-	7748	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	-109	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.1917115525034	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCGATTGATTCATTT	NA	False	NA	NA	False	TATAAA	-18	NA	90411100	90263229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90410473
ES.19493.5	chr2	-	7270	23	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	13682	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.218719306101	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90397309	90263232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298810_90299877_90300106_90301436_90301680_90305314_90305334_90397179
ES.19493.6	chr2	-	7203	23	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	2688	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	19.7367488761029	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90306826	90263232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90306760
ES.19493.7	chr2	-	7706	22	NNC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	23.4814540607531	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90411078	90263232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281154_90281201_90282403_90282492_90283392_90283513_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301682_90410487
ES.19494.1	chr2	-	1932	1	Intergenic	novelGene_16161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTATTTAATTGAAT	3840	False	NA	NA	False	ATTAAA	-26	NA	90467413	90465481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90465500_90467400
ES.19494.2	chr2	-	395	2	Intergenic	novelGene_16160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTATTTAATTGAAT	3854	False	NA	NA	False	ATTAAA	-26	NA	90467399	90465481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90465758_90467280
ES.19495.1	chr2	+	162	1	Intergenic	novelGene_16162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	90476483	90476645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90476500_90476600
ES.19496.1	chr2	-	135	1	Intergenic	novelGene_16163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATTAAATTAA	6642	False	NA	NA	False	NA	NA	NA	90484442	90484307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90484300_90484400
ES.19497.1	chr2	-	89	1	Intergenic	novelGene_16164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAGCAGTGTATAATG	1290	False	NA	NA	False	NA	NA	NA	90504621	90504532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90504500_90504600
ES.19498.1	chr2	+	5344	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	1996	-113	1996	113	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTGTTACATAGTTTA	NA	False	NA	94	True	TATAAA	-25	NA	90509554	90566785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.10	chr2	+	3945	30	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2163	-242	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	123.22671313463	743	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTGAATCTGGCTAA	NA	False	NA	NA	False	AATAAA	-25	NA	90509721	90566430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510216_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.101	chr2	+	4659	35	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2556	275	2556	269	3prime_fragment	FALSE	canonical	3	459	junction_10	63.1749164558542	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAAATTATGACCAGC	NA	False	NA	NA	False	AATAAA	-24	NA	90510114	90566397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.102	chr2	+	185	1	Intergenic	novelGene_16165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	90512590	90512775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90512600_90512800
ES.19498.103	chr2	+	4822	34	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	6706	0	-1250	0	3prime_fragment	FALSE	canonical	3	459	junction_9	64.0733481206807	738	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90514264	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.104	chr2	+	4051	34	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	-1151	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	116.004163821283	730	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTTGCTTGTGGTG	NA	False	NA	NA	False	AAGAAA	-17	NA	90514363	90566007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553785_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.105	chr2	+	4638	33	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	-1145	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	115.734842251318	738	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90514369	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551677_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.106	chr2	+	5078	34	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	-572	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.703339557632	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTATATTAAGATTT	NA	False	NA	14	True	AATAAA	-16	NA	90514942	90566670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90529560_90529657_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.107	chr2	+	3390	29	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	7785	10531	-171	7886	internal_fragment	FALSE	canonical	3	459	junction_8	48.5525698683018	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTATGTGTGTGGATCT	NA	False	NA	NA	False	GATAAA	-12	NA	90515343	90556141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945
ES.19498.108	chr2	+	4342	31	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	11889	-32	0	32	3prime_fragment	FALSE	canonical	3	459	junction_6	65.585025391133	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCTATACTATTTGT	NA	False	NA	13	True	NA	NA	NA	90519447	90566704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.11	chr2	+	4798	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2163	266	2163	-266	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACCAGCTTTTTAAGG	NA	False	NA	NA	False	AATAAA	-33	NA	90509721	90566406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.111	chr2	+	3643	30	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	12928	474	50	70	3prime_fragment	FALSE	canonical	3	459	junction_5	66.2084410739382	731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCACCAAATTGTCACTG	NA	False	NA	NA	False	NA	NA	NA	90520486	90566198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.112	chr2	+	3464	21	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2657	-1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_6	141.029465006431	733	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90532741	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539530_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.113	chr2	+	3049	20	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	4067	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	145.413556771969	732	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90534151	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560030_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.115	chr2	+	5345	16	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	-5571	3511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	164.301132747837	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTTCGTGGTTTATAT	NA	False	NA	NA	False	AATAAA	-1	NA	90542331	90570183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758_90566220_90566801
ES.19498.116	chr2	+	5867	14	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	36557	-3505	-3787	3505	3prime_fragment	FALSE	canonical	3	510	junction_2	69.9022986814221	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCAGGCTTCGTGGT	NA	False	NA	NA	False	AATATA	-9	NA	90544115	90570177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.117	chr2	+	3776	10	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	-1195	0	intron_retention	FALSE	canonical	3	555	junction_8	70.0012345570146	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90546707	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.119	chr2	+	1573	9	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	43973	275	3629	269	3prime_fragment	FALSE	canonical	3	555	junction_7	74.0927417160413	724	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAAATTATGACCAGC	NA	False	NA	NA	False	AATAAA	-24	NA	90551531	90566397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.12	chr2	+	5071	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2163	-7	2163	7	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGATTTATCTTTTAA	NA	False	NA	-12	True	AATAAA	-25	NA	90509721	90566679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.120	chr2	+	2034	5	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	47741	1	7397	-1	3prime_fragment	FALSE	canonical	3	555	junction_3	92.3146792227542	727	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90555299	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.121	chr2	+	4815	4	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	52462	-3526	-3047	3526	3prime_fragment	FALSE	canonical	3	555	junction_2	105.918207436997	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAACCTCCATAAAAC	NA	False	NA	NA	False	AATAAA	-16	NA	90560020	90570198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.122	chr2	+	6551	1	Genic_Genomic	ENSMUSG00000051329.14	novel	NA	NA	NA	NA	2773	5719	mono-exon	FALSE	NA	NA	NA	NA	NA	733	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90565840	90572391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_90565800_90572400
ES.19498.14	chr2	+	4985	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2165	30	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	113.010311973045	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCTCTATACTATTT	NA	False	NA	11	True	NA	NA	NA	90509723	90566702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.15	chr2	+	4474	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2170	583	2170	-39	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTCAGAGTTTATATT	NA	False	NA	NA	False	NA	NA	NA	90509728	90566089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.16	chr2	+	5043	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2170	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.78139953748	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGATTTATCTTTTAA	NA	False	NA	-12	True	AATAAA	-25	NA	90509728	90566679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510136_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.17	chr2	+	4069	29	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2171	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.913817910571	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509729	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510216_90526994_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.18	chr2	+	4896	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2171	-166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	113.606984551019	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATTAATTTATGTG	NA	False	NA	NA	False	TATAAA	-21	NA	90509729	90566506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519443_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.19	chr2	+	7158	34	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2171	0	intron_retention	FALSE	canonical	2	4	junction_14	115.894088947954	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509729	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532907_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.20	chr2	+	5048	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2171	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	113.757960026487	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509729	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530763_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.23	chr2	+	5566	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-1	intron_retention	FALSE	canonical	3	459	junction_11	62.722324298434	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509730	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.24	chr2	+	8358	34	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-1	intron_retention	FALSE	canonical	2	9	junction_3	115.661073530429	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509730	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.25	chr2	+	2597	20	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2172	27275	2172	6596	internal_fragment	FALSE	canonical	3	459	junction_11	48.9267075806398	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTTTATTTTCTTTC	NA	False	NA	NA	False	CATAAA	-20	NA	90509730	90539397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166
ES.19498.26	chr2	+	6300	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-1	intron_retention	FALSE	canonical	3	459	junction_11	65.2099417664999	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509730	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.29	chr2	+	5849	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2172	-794	2172	794	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	753	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGTCTTAAAGGTTC	NA	False	NA	NA	False	NA	NA	NA	90509730	90567466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.3	chr2	+	8617	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2157	-3547	2157	3547	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGTCAAATAATGTGG	NA	False	NA	NA	False	AATAAA	-37	NA	90509715	90570219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.31	chr2	+	7764	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-1	intron_retention	FALSE	canonical	3	459	junction_10	63.5030242039305	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509730	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.32	chr2	+	5895	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	0	intron_retention	FALSE	canonical	3	459	junction_10	64.8156622214427	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509730	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.33	chr2	+	4879	34	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	117.078446855474	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509730	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.34	chr2	+	4916	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-163	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	114.207201602873	745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATTTATGTGATT	NA	False	NA	NA	False	TATAAA	-24	NA	90509730	90566509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517613_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.35	chr2	+	5236	34	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2172	-1	intron_retention	FALSE	canonical	3	459	junction_11	65.963467642028	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509730	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.36	chr2	+	4363	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2172	692	2172	-148	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGAAAACAAAGTCA	NA	False	NA	NA	False	TATAAA	-35	NA	90509730	90565980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.39	chr2	+	4907	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2173	264	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_20	113.585813481356	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTAAGAATAAATTATGA	NA	False	NA	NA	False	AATAAA	-19	NA	90509731	90566392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539530_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.4	chr2	+	8489	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2157	3506	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	113.069326756027	758	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACCAGGCTTCGTGGTT	NA	False	NA	NA	False	AATATA	-10	NA	90509715	90570178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.41	chr2	+	8609	34	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2173	5	intron_retention	FALSE	canonical	3	459	junction_9	63.9024020523677	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAAGATTTATCTTTT	NA	False	NA	-14	True	AATAAA	-23	NA	90509731	90566677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.42	chr2	+	5583	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2173	536	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	114.360354197794	751	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTTTGTTTTGTTGTT	NA	False	NA	9	True	NA	NA	NA	90509731	90567208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563456_90563555_90565758
ES.19498.45	chr2	+	5043	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2176	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	114.360354197794	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509734	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532364_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.47	chr2	+	6023	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	255	intron_retention	FALSE	canonical	2	4	junction_15	114.305954399028	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGCATAGATTAAGAAT	NA	False	NA	NA	False	AATAAA	-10	NA	90509735	90566383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532907_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.49	chr2	+	5095	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	29	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	112.793812248867	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTCTCTATACTATT	NA	False	NA	10	True	NA	NA	NA	90509735	90566701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532907_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.50	chr2	+	1506	9	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	42085	2177	4	internal_fragment	FALSE	canonical	3	521	junction_6	48.3806521245839	611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAGTATGATTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	90509735	90524587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175
ES.19498.52	chr2	+	4199	31	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	157.024074587307	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509735	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510152_90519534_90519565_90520410_90520570_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.53	chr2	+	5533	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.250294511298	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509735	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90514832_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.54	chr2	+	5175	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	33	intron_retention	FALSE	canonical	3	459	junction_11	65.1253050919671	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTATACTATTTGTT	NA	False	NA	14	True	NA	NA	NA	90509735	90566705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.55	chr2	+	8530	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	3511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	147.547942475386	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTTCGTGGTTTATAT	NA	False	NA	NA	False	AATAAA	-1	NA	90509735	90570183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532907_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539350_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.56	chr2	+	4205	30	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	32	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	123.22671313463	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCTATACTATTTGT	NA	False	NA	13	True	NA	NA	NA	90509735	90566704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510216_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.57	chr2	+	4665	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.971092925553	745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATTTATGTGATT	NA	False	NA	NA	False	TATAAA	-24	NA	90509735	90566509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514475_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544243_90547973_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.58	chr2	+	3990	29	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.913817910571	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510142_90526994_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.59	chr2	+	5002	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	115.809801116322	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509735	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539350_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.6	chr2	+	4976	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2163	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	113.069326756027	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509721	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.60	chr2	+	4855	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	144.8364482259	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509735	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.62	chr2	+	4461	35	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	2793	2177	-2249	internal_fragment	FALSE	canonical	3	459	junction_11	50.7934279049869	733	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGTAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	90509735	90563879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449
ES.19498.65	chr2	+	4109	30	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.445079788122	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510152_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.66	chr2	+	5292	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	-242	2177	242	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	749	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCAATTGTAGTCTGA	NA	False	NA	NA	False	CATAAA	-22	NA	90509735	90566914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.67	chr2	+	4084	30	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	158.048427985175	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTATATTAAGATTT	NA	False	NA	14	True	AATAAA	-16	NA	90509735	90566670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510216_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.68	chr2	+	5231	37	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	144.099599043316	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAGATTTATCTTTTA	NA	False	NA	-13	True	AATAAA	-24	NA	90509735	90566678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90511695_90511871_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.69	chr2	+	5064	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	105.921688438358	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCTATACTATTTGT	NA	False	NA	13	True	NA	NA	NA	90509735	90566704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563546_90565767
ES.19498.7	chr2	+	5287	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2163	-73	intron_retention	FALSE	canonical	3	459	junction_10	64.8156622214427	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAACAGCTGCTTTTG	NA	False	NA	NA	False	NA	NA	NA	90509721	90566055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.70	chr2	+	4800	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	-163	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	113.069326756027	745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATTTATGTGATT	NA	False	NA	NA	False	TATAAA	-24	NA	90509735	90566509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.71	chr2	+	4667	37	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	112.76240658795	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTGTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	90509735	90567221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758_90565870_90566801
ES.19498.72	chr2	+	5074	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2178	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	113.825702775098	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTATATTAAGATTT	NA	False	NA	14	True	AATAAA	-16	NA	90509736	90566670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548665_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.73	chr2	+	5497	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2179	536	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	113.069326756027	751	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTTTGTTTTGTTGTT	NA	False	NA	9	True	NA	NA	NA	90509737	90567208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.74	chr2	+	2765	21	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2179	6596	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	166.934979857428	674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGTTTATTTTCTTTC	NA	False	NA	NA	False	CATAAA	-20	NA	90509737	90539397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90511695_90511871_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166
ES.19498.75	chr2	+	4955	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2180	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	144.803777152224	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509738	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532907_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.78	chr2	+	4259	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2181	-126	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_28	112.197326171349	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGACCCTGTGCTTGCTTG	NA	False	NA	NA	False	AAGAAA	-12	NA	90509739	90566002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551578_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.79	chr2	+	5114	37	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2181	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	168.097090826833	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509739	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90511695_90511871_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.8	chr2	+	5616	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2163	-552	2163	552	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTCTG	NA	False	NA	25	True	NA	NA	NA	90509721	90567224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.83	chr2	+	5047	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2183	9	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_14	111.179722127036	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATTTATCTTTTAAGG	NA	False	NA	-10	True	AATAAA	-27	NA	90509741	90566681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532730_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.84	chr2	+	4926	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2183	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_28	112.197326171349	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTATATTAAGATTTA	NA	False	NA	15	True	AATAAA	-17	NA	90509741	90566671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551578_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.85	chr2	+	5056	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2183	101	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	145.143824518711	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTAACATCCTATTTG	NA	False	NA	82	True	TATAAA	-13	NA	90509741	90566773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532889_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.87	chr2	+	5845	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2186	-246	intron_retention	FALSE	canonical	3	459	junction_11	65.2099417664999	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATATTTTGAATCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	90509744	90566426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.88	chr2	+	5059	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2187	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.345041743963	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAACAAGTCTCTATAC	NA	False	NA	6	True	AATAAA	-43	NA	90509745	90566697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517643_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.89	chr2	+	5004	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2187	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	145.783792945973	747	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATCCTTTGATTTTA	NA	False	NA	-4	True	NA	NA	NA	90509745	90566652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540385_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563131_90563251_90563449_90563555_90565758
ES.19498.9	chr2	+	8617	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2163	3559	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_14	111.179722127036	758	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGTATTATAAGTAA	NA	False	NA	NA	False	CATAAA	-16	NA	90509721	90570231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532730_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.90	chr2	+	4356	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2188	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	114.360354197794	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGACCCTGTGCTTGCTT	NA	False	NA	NA	False	AAGAAA	-11	NA	90509746	90566001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537396_90538483_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.91	chr2	+	592	3	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2188	52033	2188	-8225	internal_fragment	FALSE	canonical	3	579	junction_2	41.5	573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCACAGAGTACTTGCC	NA	False	NA	NA	False	ATTAAA	-14	NA	90509746	90514639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90509853_90510115_90510228_90514265
ES.19498.95	chr2	+	4976	35	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2190	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	116.020062249124	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509748	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90524158_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.96	chr2	+	5299	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2191	0	intron_retention	FALSE	canonical	3	459	junction_10	63.1749164558542	747	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509749	90566672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19498.97	chr2	+	4976	34	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2191	-242	intron_retention	FALSE	canonical	3	459	junction_11	65.963467642028	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTGAATCTGGCTAA	NA	False	NA	NA	False	AATAAA	-25	NA	90509749	90566430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ES.19499.1	chr2	-	490	1	Antisense	novelGene_ENSMUSG00000051329.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAATTGTTTGTGAATT	NA	False	NA	NA	False	AATACA	-19	NA	90509565	90509075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90509100_90509600
ES.195.1	chr1	+	2180	1	Antisense	novelGene_ENSMUSG00000101111.2_AS_novelGene_ENSMUSG00000067736.3_AS_novelGene_ENSMUSG00000100131.2_AS_novelGene_ENSMUSG00000101939.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATGAGTTTGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	24650849	24653029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_24650800_24653000
ES.195.2	chr1	+	1184	1	Antisense	novelGene_ENSMUSG00000067736.3_AS_novelGene_ENSMUSG00000100131.2_AS_novelGene_ENSMUSG00000101939.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGAATCTACTAATTG	NA	False	NA	NA	False	AATGAA	-38	NA	24651032	24652216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_24651000_24652200
ES.1950.1	chr1	-	102	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTTTGTGCAAACTT	9655	False	NA	NA	False	NA	NA	NA	172497310	172497208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_172497200_172497300
ES.19500.1	chr2	-	4542	36	Antisense	novelGene_ENSMUSG00000051329.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACGGGACAAGGGCGG	8453	False	NA	NA	False	NA	NA	NA	90566163	90509732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90509852_90510115_90510235_90514271_90514477_90515316_90515537_90517634_90517716_90519449_90519563_90520408_90520568_90523394_90523473_90524173_90524274_90526983_90527069_90528203_90528271_90530457_90530542_90530754_90530926_90532354_90532456_90532723_90532891_90533402_90533529_90534152_90534316_90537266_90537401_90538476_90538547_90539165_90539327_90540376_90540445_90542286_90542387_90544115_90544236_90547935_90548033_90548157_90548251_90548340_90548438_90548529_90548636_90551531_90551694_90552372_90552435_90553680_90553790_90553953_90554080_90555945_90556047_90560022_90560163_90563122_90563251_90563450_90563554_90565756
ES.19500.2	chr2	-	2939	1	Antisense	novelGene_ENSMUSG00000051329.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	8654	False	NA	NA	False	CATAAA	-35	NA	90514459	90511520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90511500_90514500
ES.19500.3	chr2	-	3168	1	Antisense	novelGene_ENSMUSG00000051329.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAACAAAAACAACAAC	7547	False	NA	NA	False	NA	NA	NA	90521349	90518181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90518200_90521300
ES.19500.4	chr2	-	173	1	Intergenic	novelGene_16166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTGTGCAATAC	3792	False	NA	NA	False	NA	NA	NA	90525104	90524931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90524900_90525100
ES.19500.5	chr2	-	2157	1	Intergenic	novelGene_16167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATTAAAAAAAAAATA	8898	False	NA	NA	False	NA	NA	NA	90547464	90545307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90545300_90547500
ES.19500.6	chr2	-	6477	2	Antisense	novelGene_ENSMUSG00000051329.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATTTTGCCGGGCA	8662	False	NA	NA	False	NA	NA	NA	90569214	90559777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90560163_90563122
ES.19501.1	chr2	+	168	1	Intergenic	novelGene_16168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGGCGAGCGGGGCT	NA	False	NA	NA	False	NA	NA	NA	90575046	90575214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90575000_90575200
ES.19502.1	chr2	+	4619	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	74	-2	74	2	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTGATTAGCAGTT	NA	False	NA	20	True	AATAAA	-24	NA	90575787	90611367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.10	chr2	+	4695	19	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-50	-14	combination_of_known_junctions	FALSE	canonical	3	13	junction_13	107.962727907755	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCTGTTAAAGCTTTT	NA	False	NA	4	True	AATAAA	-8	NA	90575897	90611351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90605093_90605193_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.12	chr2	+	4598	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-49	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	97.1027707992198	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAAGCTTTTGTCTTGA	NA	False	NA	11	True	AATAAA	-15	NA	90575898	90611358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90605093_90605193_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.13	chr2	+	4111	19	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-49	-549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	110.488435795084	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGGTTATCCTTTTGCT	NA	False	NA	8	True	AATAAA	-17	NA	90575898	90610816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593561_90593613_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.14	chr2	+	4229	20	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-49	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	114.462298284334	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	NA	False	NA	10	True	AATAAA	-19	NA	90575898	90610818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90605093_90605193_90606248_90606566_90606674_90606820_90607908_90608265_90609285_90609354_90609542_90609701_90609904
ES.19502.15	chr2	+	1884	9	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	186	17236	-48	2	5prime_fragment	FALSE	canonical	3	188	junction_7	19.2986398484453	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATGTGAAAATTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	90575899	90594129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764
ES.19502.16	chr2	+	4911	17	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-43	-3	intron_retention	FALSE	canonical	3	33	junction_11	76.9273195945368	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	15	True	AATAAA	-19	NA	90575904	90611362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.18	chr2	+	6744	15	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-35	0	intron_retention	FALSE	canonical	3	188	junction_7	51.2715857976334	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575912	90611365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90609701_90609904
ES.19502.19	chr2	+	4415	17	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-34	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.287233781273	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	NA	False	NA	10	True	AATAAA	-19	NA	90575913	90610818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90597751_90597886_90598196_90598300_90598386_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.2	chr2	+	4007	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	138	546	-96	-546	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575851	90610819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.20	chr2	+	3884	13	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-25	403	intron_retention	FALSE	canonical	3	188	junction_7	40.6081375260345	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	90575922	90607222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674
ES.19502.21	chr2	+	3472	11	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	210	11867	-24	1078	intron_retention	FALSE	canonical	3	188	junction_7	18.6614576065215	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATAAC	NA	False	NA	NA	False	CATAAA	-15	NA	90575923	90599498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751
ES.19502.22	chr2	+	5656	15	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	188	junction_7	53.0019733941433	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	15	True	AATAAA	-19	NA	90575923	90611362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542
ES.19502.23	chr2	+	6391	14	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-24	-546	intron_retention	FALSE	canonical	3	188	junction_7	42.8231536111845	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575923	90610819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908
ES.19502.24	chr2	+	4956	17	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-16	-547	intron_retention	FALSE	canonical	1	1	junction_15	92.119466421327	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	NA	False	NA	10	True	AATAAA	-19	NA	90575931	90610818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90608749_90608806_90609542_90609701_90609904
ES.19502.25	chr2	+	3981	12	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-14	402	intron_retention	FALSE	canonical	3	188	junction_7	17.7982263021946	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	90575933	90607221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248
ES.19502.26	chr2	+	6177	15	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-14	-546	intron_retention	FALSE	canonical	3	188	junction_7	51.2715857976334	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575933	90610819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90609701_90609904
ES.19502.27	chr2	+	5541	17	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	13	junction_11	96.757347912187	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	15	True	AATAAA	-19	NA	90575933	90611362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90605093_90605193_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.28	chr2	+	2790	6	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-14	1092	intron_retention	FALSE	canonical	0	0	junction_1	85.5158464847305	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACCATACTTCTTTCAT	NA	False	NA	NA	False	CATAAA	-29	NA	90575933	90599512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751
ES.19502.29	chr2	+	2590	13	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-13	1078	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	68.7133235503373	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATAAC	NA	False	NA	NA	False	CATAAA	-15	NA	90575934	90599498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859
ES.19502.3	chr2	+	4110	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-96	-546	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTATCCTTTTGCTCTT	NA	False	NA	11	True	AATAAA	-20	NA	90575851	90610819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.30	chr2	+	5126	17	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-13	-9	intron_retention	FALSE	non_canonical	0	0	junction_2	94.259283362436	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAAAGCTTTTGTCTT	NA	False	NA	9	True	AATAAA	-13	NA	90575934	90611356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581409_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.31	chr2	+	4496	18	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-13	-548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	99.256788355266	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTTATCCTTTTGCTC	NA	False	NA	9	True	AATAAA	-18	NA	90575934	90610817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598386_90599045_90606248_90606566_90606676_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.33	chr2	+	5041	18	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	91.0095245785508	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGCTTTTGTCTTGATT	NA	False	NA	13	True	AATAAA	-17	NA	90575934	90611360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598386_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.34	chr2	+	3919	18	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	54	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	84.7796655779069	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAGCTTTTGTCTTGAT	NA	False	NA	12	True	AATAAA	-16	NA	90576001	90611359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904_90609942_90610419
ES.19502.35	chr2	+	3592	15	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	5696	551	-1506	-551	3prime_fragment	FALSE	canonical	3	117	junction_9	68.5046177499096	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGGTTATCCTTTTG	1917	False	NA	6	True	AATAAA	-15	NA	90581409	90610814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.36	chr2	+	172	1	Intergenic	novelGene_16169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATTTCTTTTTTTTTTT	7568	False	NA	NA	False	NA	NA	NA	90587060	90587232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90587100_90587200
ES.19502.37	chr2	+	3001	11	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	11964	549	-270	-549	3prime_fragment	FALSE	canonical	3	117	junction_5	78.3744856442452	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGGTTATCCTTTTGCT	8185	False	NA	8	True	AATAAA	-17	NA	90587677	90610816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.38	chr2	+	3256	11	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-155	-547	intron_retention	FALSE	canonical	0	0	junction_8	118.915137808439	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	8300	False	NA	10	True	AATAAA	-19	NA	90587792	90610818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606976_90607908_90608265_90609542_90609701_90609904
ES.19502.39	chr2	+	2161	8	NNC	ENSMUSG00000008200.16	novel	2442	14	NA	NA	-182	-550	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	149.668613535207	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGGTTATCCTTTTGC	NA	False	NA	7	True	AATAAA	-16	NA	90598266	90610815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90608749_90608806_90609542_90609701_90609904
ES.19502.4	chr2	+	4984	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-94	-541	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTGCTCTTCTAAG	NA	False	NA	16	True	AATAAA	-25	NA	90575853	90610824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.40	chr2	+	5605	5	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	26820	547	-3353	-547	3prime_fragment	FALSE	canonical	3	295	junction_2	26.5459507269941	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	3016	False	NA	10	True	AATAAA	-19	NA	90602533	90610818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.41	chr2	+	3431	6	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-1126	-550	intron_retention	FALSE	canonical	1	1	junction_4	162.101943233263	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGGTTATCCTTTTGC	5243	False	NA	7	True	AATAAA	-16	NA	90604760	90610815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90606566_90606674_90606820_90607908_90608265_90608749_90608806_90609542_90609701_90609904
ES.19502.42	chr2	+	3993	5	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-1038	0	intron_retention	FALSE	canonical	0	0	junction_2	153.935863267791	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	5331	False	NA	18	True	AATAAA	-22	NA	90604848	90611365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90606566_90606674_90606976_90607908_90608265_90609542_90609701_90609904
ES.19502.43	chr2	+	3796	5	ISM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	29176	0	-997	0	3prime_fragment	FALSE	canonical	3	295	junction_2	26.5459507269941	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	5372	False	NA	18	True	AATAAA	-22	NA	90604889	90611365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.5	chr2	+	4634	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-77	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	False	NA	15	True	AATAAA	-19	NA	90575870	90611362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.6	chr2	+	4520	17	NNC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	87.3834938646882	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575882	90611365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583301_90583405_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.7	chr2	+	5489	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-58	0	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575889	90611365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19502.8	chr2	+	5915	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	-56	-4	intron_retention	FALSE	canonical	3	33	junction_10	92.4812052977973	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTTGTCTTGATTA	NA	False	NA	14	True	AATAAA	-18	NA	90575891	90611361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ES.19503.1	chr2	-	205	1	Intergenic	novelGene_16170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTATACTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	90617411	90617206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90617200_90617400
ES.19504.1	chr2	-	273	1	Intergenic	novelGene_16171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCTTGGAATCCACAG	NA	False	NA	NA	False	NA	NA	NA	90624804	90624531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90624500_90624800
ES.19505.1	chr2	-	177	1	Intergenic	novelGene_16172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCCAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90625467	90625290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90625300_90625500
ES.19506.1	chr2	+	159	1	Intergenic	novelGene_16173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	90653015	90653174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90653000_90653200
ES.19507.1	chr2	-	182	1	Intergenic	novelGene_16174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	90661664	90661482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90661500_90661700
ES.19508.1	chr2	+	212	1	Intergenic	novelGene_16175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAGATTTATTATTA	NA	False	NA	NA	False	NA	NA	NA	90668534	90668746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90668500_90668700
ES.19509.1	chr2	+	1272	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	-92	1416	-92	3	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTGTCTGCCTTTTT	4	False	NA	54	True	NA	NA	NA	90677406	90695738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.10	chr2	+	3905	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_3	762.571281047015	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGATTGGTGTCTGCCT	164	False	NA	50	True	NA	NA	NA	90677566	90695734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680882_90681403_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.12	chr2	+	5289	10	NIC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	2343	junction_9	177.571547047909	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	167	False	NA	44	True	NA	NA	NA	90677569	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90691794_90693933_90694010_90695527
ES.19509.13	chr2	+	2334	13	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	167	False	NA	8	True	NA	NA	NA	90677569	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.14	chr2	+	1083	13	NIC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	168	False	NA	51	True	NA	NA	NA	90677570	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.15	chr2	+	2328	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-46	-1	-4	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	168	False	NA	8	True	NA	NA	NA	90677570	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.16	chr2	+	7336	9	NNC	ENSMUSG00000027282.18	novel	2377	13	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_1	840.529557778904	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	172	False	NA	44	True	NA	NA	NA	90677574	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90683458_90685267_90685326_90685779_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.17	chr2	+	7470	11	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	2037	junction_2	237.67307377993	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	173	False	NA	8	True	NA	NA	NA	90677575	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90679800_90679941_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.18	chr2	+	9883	9	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	853.031130366882	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCTTAGCCTGCTGC	173	False	NA	7	True	NA	NA	NA	90677575	90696984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90683458_90685267_90685326_90685779_90685832_90687149_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.19	chr2	+	6227	10	NIC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	2343	junction_9	174.726735500797	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	175	False	NA	51	True	NA	NA	NA	90677577	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.2	chr2	+	1180	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-147	1248	-29	1	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	67	False	NA	52	True	NA	NA	NA	90677469	90695736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.20	chr2	+	3702	13	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	735.45590546877	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGGAGGTGATTGGT	175	False	NA	42	True	NA	NA	NA	90677577	90695726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680882_90681403_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.21	chr2	+	6008	11	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	8	2	intron_retention	FALSE	non_canonical	0	0	junction_3	795.964044414068	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTTAGCCTGCTGCTT	180	False	NA	9	True	NA	NA	NA	90677582	90696986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680882_90681407_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90691794_90693933_90694010_90695527
ES.19509.22	chr2	+	1137	13	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	729.912147491433	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	184	False	NA	52	True	NA	NA	NA	90677586	90695736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683136_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.23	chr2	+	7626	10	NNC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	-10	1	intron_retention	FALSE	canonical	0	0	junction_1	1075.47881957667	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	184	False	NA	52	True	NA	NA	NA	90677586	90695736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90684387_90684584_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.24	chr2	+	1029	12	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	750.113743441069	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	185	False	NA	44	True	NA	NA	NA	90677587	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.25	chr2	+	1005	12	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	770.217710984401	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	185	False	NA	44	True	NA	NA	NA	90677587	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90695527
ES.19509.26	chr2	+	2438	13	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	735.438682390011	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	185	False	NA	8	True	NA	NA	NA	90677587	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685679_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.28	chr2	+	8492	9	NNC	ENSMUSG00000027282.18	novel	1066	12	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	1118.57487456138	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGATTGGTGTCTGC	185	False	NA	48	True	NA	NA	NA	90677587	90695732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90684387_90684584_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90691794_90693933_90694010_90695527
ES.19509.29	chr2	+	4402	11	NIC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	2343	junction_10	168.459164191207	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	190	False	NA	51	True	NA	NA	NA	90677592	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.3	chr2	+	5584	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_3	1016.36927954199	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGATTGGTGTCTGCCT	97	False	NA	50	True	NA	NA	NA	90677499	90695734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680882_90681403_90684387_90684584_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.30	chr2	+	4205	12	NIC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	2037	junction_3	226.619169387509	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGATTGGTGTCTGC	200	False	NA	48	True	NA	NA	NA	90677602	90695732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.31	chr2	+	4521	10	NIC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	2343	junction_9	134.820960380887	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	206	False	NA	44	True	NA	NA	NA	90677608	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.33	chr2	+	5096	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_3	762.571281047015	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCATGCTTAGCCTGCT	221	False	NA	5	True	NA	NA	NA	90677623	90696982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680882_90681403_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.38	chr2	+	2833	12	NNC	ENSMUSG00000027282.18	novel	2377	13	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_4	764.806700582702	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	229	False	NA	44	True	NA	NA	NA	90677631	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90684387_90684584_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.39	chr2	+	3679	3	NNC	ENSMUSG00000027282.18	novel	2241	3	NA	NA	3	12	intron_retention	FALSE	canonical	0	0	junction_2	1461	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGCCTGTTTTGTTGTT	231	False	NA	NA	False	NA	NA	NA	90677633	90681976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90679800_90679941_90680882_90681403
ES.19509.4	chr2	+	2415	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	12	169	-11	1	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	108	False	NA	8	True	NA	NA	NA	90677510	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.40	chr2	+	945	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111468.10	1066	12	113	8	4	-8	multi-exon	FALSE	canonical	3	420	junction_1	628.312668913619	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAAATGGAGGTGATTG	232	False	NA	40	True	NA	NA	NA	90677634	90695724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90677730_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.41	chr2	+	6620	9	NIC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	7	1	intron_retention	FALSE	canonical	3	2343	junction_8	142.344652165088	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTTAGCCTGCTGCT	235	False	NA	8	True	NA	NA	NA	90677637	90696985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90691794_90693933_90694010_90695527
ES.19509.42	chr2	+	1017	12	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	762.571281047015	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	236	False	NA	44	True	NA	NA	NA	90677638	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680063_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.43	chr2	+	10907	8	NNC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	922	2	intron_retention	FALSE	canonical	0	0	junction_1	1285.15922939454	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTTAGCCTGCTGCTT	1150	False	NA	9	True	NA	NA	NA	90678552	90696986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90684387_90684584_90685326_90685779_90685832_90687149_90687196_90689819_90689914_90690806_90694010_90695527
ES.19509.44	chr2	+	4878	3	FSM	ENSMUSG00000027282.18	ENSMUST00000135026.2	574	3	-4384	80	4030	0	multi-exon	FALSE	canonical	3	2343	junction_2	21.5	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	7809	False	NA	51	True	NA	NA	NA	90687199	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90691794_90693933_90694010_90695527
ES.19509.45	chr2	+	5651	2	FSM	ENSMUSG00000027282.18	ENSMUST00000142350.2	412	2	-5239	0	-3020	0	multi-exon	FALSE	canonical	3	2343	junction_1	0	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGATTGGTGTCTGC	9173	False	NA	48	True	NA	NA	NA	90688563	90695732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90694010_90695527
ES.19509.46	chr2	+	1562	5	ISM	ENSMUSG00000027282.18	ENSMUST00000057216.15	1047	13	11114	7	-2839	-4	3prime_fragment	FALSE	canonical	3	2343	junction_4	126.259653096308	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	9354	False	NA	44	True	NA	NA	NA	90688744	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.47	chr2	+	3711	2	Intergenic	novelGene_16176	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTAATTTATTTTATT	NA	False	NA	NA	False	NA	NA	NA	90701469	90705226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90704572_90704617
ES.19509.48	chr2	+	1340	2	FSM	ENSMUSG00000040794.6	ENSMUST00000111466.3	1290	2	-48	-2	-48	2	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGTGATGCCTTTTCC	NA	False	NA	34	True	AATAAA	-40	NA	90716155	90720871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90716348_90719723
ES.19509.49	chr2	+	137	1	Intergenic	novelGene_16178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAATATCTTT	927	False	NA	NA	False	NA	NA	NA	90733675	90733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90733700_90733800
ES.19509.5	chr2	+	1272	15	NNC	ENSMUSG00000027282.18	novel	2596	13	NA	NA	-11	68942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	906.686330569076	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATCTTAAATGGTCAG	108	False	NA	NA	False	NA	NA	NA	90677510	90766096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527_90695738_90725688_90725729_90766031
ES.19509.50	chr2	+	2343	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCTGTGTTGAC	2334	False	NA	NA	False	AATAAA	-41	NA	90735082	90740904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
ES.19509.51	chr2	+	3183	3	NIC	ENSMUSG00000005505.13	novel	2437	4	NA	NA	9	-1	intron_retention	FALSE	canonical	3	67	junction_1	2	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCTGTGTTGAC	2347	False	NA	NA	False	AATAAA	-41	NA	90735095	90740904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90736628_90737888_90737996_90739360
ES.19509.52	chr2	+	2417	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	19	1	-7	-1	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCTGTGTTGAC	2357	False	NA	NA	False	AATAAA	-41	NA	90735105	90740904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
ES.19509.53	chr2	+	2034	1	NIC	ENSMUSG00000005505.13	novel	2343	4	NA	NA	2	751	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTAAAATAGGAAACATTT	2366	False	NA	NA	False	NA	NA	NA	90735114	90737148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90735100_90737100
ES.19509.54	chr2	+	1281	4	NIC	ENSMUSG00000005505.13	novel	2437	4	NA	NA	6	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	34.1857670188438	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTTTTCTTCAAGTAA	2370	False	NA	NA	False	AATAAA	-14	NA	90735118	90741972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90735254_90736009_90736628_90737888_90737996_90741551
ES.19509.55	chr2	+	2635	4	NIC	ENSMUSG00000005505.13	novel	2437	4	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.5678778348646	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCTGTGTTGAC	2386	False	NA	NA	False	AATAAA	-41	NA	90735134	90740904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90735254_90735762_90736628_90737888_90737996_90739360
ES.19509.56	chr2	+	2353	4	NIC	ENSMUSG00000005505.13	novel	469	2	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	31.1555238547945	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTCTGTGTTGAC	2667	False	NA	NA	False	AATAAA	-41	NA	90735415	90740904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90735500_90736009_90736628_90737888_90737996_90739360
ES.19509.57	chr2	+	185	1	Intergenic	novelGene_16179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACTCAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	90761329	90761514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90761300_90761500
ES.19509.6	chr2	+	6071	10	NNC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_1	815.409372305988	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATTGGTGTCTGCCTTT	127	False	NA	52	True	NA	NA	NA	90677529	90695736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90680882_90681403_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.7	chr2	+	2172	11	NIC	ENSMUSG00000027282.18	novel	2377	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	2084	junction_3	227.389445665361	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	156	False	NA	51	True	NA	NA	NA	90677558	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90691794_90693933_90694010_90695527
ES.19509.8	chr2	+	1013	11	NIC	ENSMUSG00000027282.18	novel	2281	12	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	793.930229932077	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGATTGGTGT	163	False	NA	44	True	NA	NA	NA	90677565	90695728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90680049_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.19509.9	chr2	+	1134	13	NIC	ENSMUSG00000027282.18	novel	1047	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	732.287549775056	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	163	False	NA	51	True	NA	NA	NA	90677565	90695735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90677730_90679714_90679800_90679941_90680049_90683159_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ES.1951.1	chr1	+	2368	11	NNC	ENSMUSG00000037860.16	novel	744	6	NA	NA	-121	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1877944434169	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173246640	173293271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173246671_173247022_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.10	chr1	+	2418	9	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	69512	336	-207	-328	3prime_fragment	FALSE	canonical	3	62	junction_1	21.7884000100971	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173247956	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.11	chr1	+	3549	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-63	-328	intron_retention	FALSE	canonical	3	62	junction_1	23.1499107416625	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173248100	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.12	chr1	+	2108	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-37	-328	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	29.5379382475888	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173248126	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.13	chr1	+	4543	7	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-37	-328	intron_retention	FALSE	canonical	3	62	junction_1	24.8288586572606	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173248126	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.14	chr1	+	2391	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	40.6051167983061	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAGTTTGTGACTGT	NA	False	NA	15	True	AATAAA	-33	NA	173248159	173293598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173289472_173289887_173291424_173291614_173292536
ES.1951.15	chr1	+	2393	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-2	-58	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	40.7531143169527	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAGATTGTTGATA	NA	False	NA	-43	True	NA	NA	NA	173248161	173293540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173280515_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.16	chr1	+	1977	7	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	4	-328	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	47.3617872222838	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173248167	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173280393_173280515_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.17	chr1	+	2341	10	NNC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	4	-329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.5422744868117	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173248167	173293269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173248253_173255324_173255465_173276791_173276927_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.18	chr1	+	4362	6	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	5	-327	intron_retention	FALSE	canonical	3	35	junction_1	34.6444800798049	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGATATCATTCTT	NA	False	NA	10	True	NA	NA	NA	173248168	173293271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173280393_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.19	chr1	+	2182	9	NNC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	5	-343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.2428337406972	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGCTTTGTCTAAGGT	NA	False	NA	-6	True	NA	NA	NA	173248168	173293255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173248253_173255324_173255456_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.2	chr1	+	7305	5	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-92	-329	intron_retention	FALSE	canonical	3	10	junction_1	37.6364185331176	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173246669	173293269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173280393_173283182_173287263_173287416_173289472
ES.1951.20	chr1	+	4126	9	NNC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	9	-329	intron_retention	FALSE	canonical	0	0	junction_3	47.6364815556313	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173248172	173293269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173248253_173255324_173255465_173280393_173282601_173282899_173282927_173282997_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.21	chr1	+	3789	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	13	-12	intron_retention	FALSE	canonical	3	62	junction_1	23.1499107416625	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAGAAAGTTAGAAAAAA	NA	False	NA	3	True	AATAAA	-21	NA	173248176	173293586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.22	chr1	+	4819	7	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	13	-2	intron_retention	FALSE	canonical	3	62	junction_1	24.8288586572606	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAAAAGTTTGTGACT	NA	False	NA	13	True	AATAAA	-31	NA	173248176	173293596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173248253_173255324_173255465_173280393_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.23	chr1	+	3018	11	NNC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.4316700102272	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAGTTTGTGACTGT	NA	False	NA	15	True	AATAAA	-33	NA	173248180	173293598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173248253_173255324_173255465_173272551_173272822_173274654_173274881_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.24	chr1	+	2280	10	NNC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	20	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.73129652591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173248183	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282511_173282601_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.25	chr1	+	1782	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATGACTCATGGCCTG	NA	False	NA	NA	False	NA	NA	NA	173255572	173257354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_173255600_173257400
ES.1951.26	chr1	+	2502	6	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	103249	-209	-843	209	3prime_fragment	FALSE	canonical	3	92	junction_2	16.0424437041244	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTGCTTGTATGTAT	NA	False	NA	NA	False	NA	NA	NA	173281693	173293815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.27	chr1	+	2850	5	FSM	ENSMUSG00000037860.16	ENSMUST00000166137.3	2079	5	-448	-323	-65	315	multi-exon	FALSE	canonical	3	92	junction_1	17.7341478509682	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTGCAAAAATCACATT	NA	False	NA	NA	False	AATAAA	-10	NA	173282471	173293921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.28	chr1	+	4704	1	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	5515	-326	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGATATCATTCTTC	NA	False	NA	11	True	NA	NA	NA	173288568	173293272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173288600_173293300
ES.1951.3	chr1	+	3018	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68233	0	-84	0	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGACTGTTCTATTTT	NA	False	NA	23	True	AATAAA	-41	NA	173246677	173293606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.4	chr1	+	2682	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68233	336	-84	-328	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173246677	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.5	chr1	+	3697	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-79	-328	intron_retention	FALSE	canonical	3	10	junction_1	36.0518290104677	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173246682	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.6	chr1	+	4948	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-55	-328	intron_retention	FALSE	canonical	3	10	junction_1	38.473950901346	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTGAGATATCATTCT	NA	False	NA	9	True	NA	NA	NA	173246706	173293270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.7	chr1	+	4798	8	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_3	50.762351467703	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGTGACTGTTCTAT	NA	False	NA	20	True	AATAAA	-38	NA	173246750	173293603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173280393_173282601_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.8	chr1	+	2796	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	39.9591588374931	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAGTTTGTGACTGT	NA	False	NA	15	True	AATAAA	-33	NA	173246751	173293598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.1951.9	chr1	+	2396	9	NIC	ENSMUSG00000037860.16	novel	2839	12	NA	NA	61	-329	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	39.9591588374931	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGAGATATCATTC	NA	False	NA	8	True	NA	NA	NA	173246822	173293269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_173247122_173248136_173248253_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ES.19510.1	chr2	-	173	1	Antisense	novelGene_ENSMUSG00000027282.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	90693818	90693645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90693600_90693800
ES.19511.1	chr2	-	1048	8	NNC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	28	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	869.429346039747	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTTGTTTTTTTTT	NA	False	NA	0	True	AATAAA	-27	NA	90735018	90724968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90725222_90727337_90727482_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ES.19511.10	chr2	-	2757	5	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	-19	3	intron_retention	FALSE	canonical	3	1877	junction_4	26.2963875846094	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCTGTGGTGGTTGTTT	NA	False	NA	-6	True	AATAAA	-21	NA	90735065	90724974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90734833_90734927
ES.19511.13	chr2	-	807	7	NNC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	717.137694046424	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTCTGTGGTGGTTG	NA	False	NA	-9	True	AATAAA	-18	NA	90735018	90724977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90725222_90728727_90728773_90728993_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ES.19511.14	chr2	-	4768	5	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1877	junction_4	24.6715929765388	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735053	90724979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90728848_90728980_90729107_90732706_90733289_90734766_90734833_90734927
ES.19511.15	chr2	-	4860	4	NIC	ENSMUSG00000005510.10	novel	707	6	NA	NA	-28	0	intron_retention	FALSE	canonical	3	1877	junction_3	11.2644968324772	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTTCCTCTGTGGTG	NA	False	NA	-13	True	AATAAA	-14	NA	90735014	90724981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90729107_90732706_90733289_90734766_90734833_90734927
ES.19511.16	chr2	-	178	1	Intergenic	novelGene_16177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90730946	90730768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90730800_90730900
ES.19511.2	chr2	-	981	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	74	-9	-51	7	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTGGTTGTTTTTTT	NA	False	NA	-2	True	AATAAA	-25	NA	90735097	90724970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ES.19511.3	chr2	-	2377	6	NNC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	11	6	intron_retention	FALSE	canonical	3	11	junction_4	760.763668953769	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTGGTTGTTTTTT	NA	False	NA	-3	True	AATAAA	-24	NA	90735035	90724971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733209_90734833_90734927
ES.19511.6	chr2	-	6088	4	NNC	ENSMUSG00000005510.10	novel	707	6	NA	NA	8	5	intron_retention	FALSE	non_canonical	0	0	junction_1	889.817334563049	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	90735038	90724972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90727803_90728085_90729107_90732706_90734833_90734927
ES.19511.7	chr2	-	2395	6	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	11	5	intron_retention	FALSE	canonical	3	1877	junction_5	42.6680208118446	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	90735035	90724972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90734833_90734927
ES.19511.8	chr2	-	6369	3	NIC	ENSMUSG00000005510.10	novel	707	6	NA	NA	10	5	intron_retention	FALSE	canonical	3	1877	junction_2	10.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGGTGGTTGTTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	90735036	90724972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90729107_90732706_90734833_90734927
ES.19511.9	chr2	-	6235	4	NIC	ENSMUSG00000005510.10	novel	707	6	NA	NA	10	4	intron_retention	FALSE	canonical	3	1877	junction_3	28.4292494136272	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGGTGGTTGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	90735036	90724973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90728848_90728980_90729107_90732706_90734833_90734927
ES.19512.1	chr2	-	3655	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	39	-2378	-19	381	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATAGCATAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	90748350	90738678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ES.19512.10	chr2	-	3575	2	FSM	ENSMUSG00000063235.19	ENSMUST00000150556.2	379	2	-150	-3046	-150	2	multi-exon	FALSE	canonical	3	356	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGATTGTCTGGCTAAA	NA	False	NA	NA	False	NA	NA	NA	90748163	90741335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90744520_90747772
ES.19512.11	chr2	-	840	3	NIC	ENSMUSG00000063235.19	novel	1316	4	NA	NA	3	0	intron_retention	FALSE	canonical	3	18	junction_1	147	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGATTGTCTGGCTA	NA	False	NA	NA	False	NA	NA	NA	90748386	90741337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90741664_90747772_90747854_90747953
ES.19512.2	chr2	-	4653	1	Genic_Genomic	ENSMUSG00000063235.19	novel	NA	NA	NA	NA	4574	346	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1913	False	NA	NA	False	NA	NA	NA	90743366	90738713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_90738700_90743400
ES.19512.3	chr2	-	1475	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-160	1	-160	-1	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGGACTCCCCTCAC	NA	False	NA	-2	True	AATAAA	-25	NA	90748549	90741057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ES.19512.4	chr2	-	4127	2	FSM	ENSMUSG00000063235.19	ENSMUST00000150556.2	379	2	-425	-3323	-49	-2	multi-exon	FALSE	canonical	3	356	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGACTCCCCTCA	NA	False	NA	-3	True	AATAAA	-24	NA	90748438	90741058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90744520_90747772
ES.19512.6	chr2	-	4298	2	ISM	ENSMUSG00000063235.19	ENSMUST00000155621.4	744	4	-91	-268	-18	-13	intron_retention	FALSE	canonical	3	376	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCCCTGGCCCTGTGG	NA	False	NA	-14	True	AATAAA	-13	NA	90748031	90741069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_90741664_90744327
ES.19512.7	chr2	-	949	2	NIC	ENSMUSG00000063235.19	novel	1316	4	NA	NA	-139	-38	intron_retention	FALSE	canonical	3	18	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCCAAAAATAAAAATAAAA	NA	False	NA	-39	True	NA	NA	NA	90748152	90741094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90741664_90747772
ES.19512.8	chr2	-	1066	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	-29	279	-29	2	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGATTGTCTGGCTAAA	NA	False	NA	NA	False	NA	NA	NA	90748418	90741335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ES.19513.1	chr2	+	285	1	Intergenic	novelGene_16180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGGTTTTCATAGTG	476	False	NA	NA	False	NA	NA	NA	90768900	90769185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90768900_90769200
ES.19514.1	chr2	+	1377	8	ISM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	-77	14422	-62	3558	5prime_fragment	FALSE	canonical	3	193	junction_2	245.776736249859	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTAAAGAATTACCAG	2240	False	NA	NA	False	ATTAAA	-15	NA	90770664	90835413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045
ES.19514.10	chr2	+	4872	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	-34	-8	-19	1	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2283	False	NA	16	True	ATTAAA	-16	NA	90770707	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.100	chr2	+	7813	16	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	-38	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	294.199403277588	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2419	False	NA	12	True	ATTAAA	-12	NA	90770843	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90783501_90783604_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.101	chr2	+	4436	13	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_10	251.642424329091	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2421	False	NA	15	True	ATTAAA	-15	NA	90770845	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90843043_90843188_90843582_90843748_90846910
ES.19514.102	chr2	+	3387	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	-36	1800	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	274.456531631335	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATGCAAAAAAAATAAAAA	2421	False	NA	NA	False	GATAAA	-44	NA	90770845	90845517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.104	chr2	+	4250	12	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	213.683747163075	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2422	False	NA	16	True	ATTAAA	-16	NA	90770846	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818088_90833644_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.105	chr2	+	4456	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	197.31100612002	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2423	False	NA	12	True	ATTAAA	-12	NA	90770847	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.107	chr2	+	4429	13	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_3	200.385929728944	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2423	False	NA	15	True	ATTAAA	-15	NA	90770847	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90833644_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.108	chr2	+	4503	15	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_12	294.415514023903	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2424	False	NA	13	True	ATTAAA	-13	NA	90770848	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843049_90843188_90843582_90843748_90846910
ES.19514.11	chr2	+	7946	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	215.029720299881	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2284	False	NA	16	True	ATTAAA	-16	NA	90770708	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.110	chr2	+	4148	11	NNC	ENSMUSG00000005506.17	novel	7851	13	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.253667337987	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2424	False	NA	15	True	ATTAAA	-15	NA	90770848	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770975_90833644_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.111	chr2	+	6048	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-32	2	intron_retention	FALSE	canonical	3	395	junction_7	116.779320610381	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2425	False	NA	10	True	ATTAAA	-10	NA	90770849	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.112	chr2	+	4544	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	222.416582328464	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2428	False	NA	10	True	ATTAAA	-10	NA	90770852	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835204_90836988_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.113	chr2	+	3355	15	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	-29	1729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.064874615823	825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGTGTCCTGTGTTTC	2428	False	NA	NA	False	NA	NA	NA	90770852	90845446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90783501_90783604_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.114	chr2	+	4723	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	244.812225001539	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2428	False	NA	10	True	ATTAAA	-10	NA	90770852	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90780736_90780891_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.115	chr2	+	5022	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-29	2	intron_retention	FALSE	canonical	3	280	junction_6	137.244813704886	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2428	False	NA	10	True	ATTAAA	-10	NA	90770852	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.116	chr2	+	7796	14	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-29	3	intron_retention	FALSE	canonical	2	47	junction_5	232.951629181814	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2428	False	NA	11	True	ATTAAA	-11	NA	90770852	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833644_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.119	chr2	+	7702	15	FSM	ENSMUSG00000005506.17	ENSMUST00000177642.8	7806	15	111	-7	-29	0	multi-exon	FALSE	canonical	3	14	junction_1	260.488600949235	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2428	False	NA	15	True	ATTAAA	-15	NA	90770852	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.121	chr2	+	4260	13	NNC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_10	262.75467804272	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGAACTGTTTGTCTT	2430	False	NA	6	True	ATTAAA	-6	NA	90770854	90849833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.122	chr2	+	7688	15	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	-27	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	270.324257294148	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2430	False	NA	11	True	ATTAAA	-11	NA	90770854	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90788969_90789027_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.127	chr2	+	7681	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	247.957383244229	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2438	False	NA	15	True	ATTAAA	-15	NA	90770862	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837080_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.128	chr2	+	4610	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_6	240.91102600126	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2440	False	NA	16	True	ATTAAA	-16	NA	90770864	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.129	chr2	+	4688	16	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	297.754858156094	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2440	False	NA	15	True	ATTAAA	-15	NA	90770864	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90782916_90783024_90784633_90784687_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.13	chr2	+	5156	13	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	-9	-2435	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	229.361235584588	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2293	False	NA	NA	False	AATAAA	-27	NA	90770717	90847400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.130	chr2	+	4796	16	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	262.29008538046	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAACTGTTTGTCTTCTG	2467	False	NA	9	True	ATTAAA	-9	NA	90770891	90849836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90841793_90841909_90843043_90843188_90843582_90843748_90846910
ES.19514.131	chr2	+	5244	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	71	-2435	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	240.449207585659	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2534	False	NA	NA	False	AATAAA	-27	NA	90770958	90847400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.133	chr2	+	2504	1	Intergenic	novelGene_16184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	674	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAAAGTTTTTCAAGAAA	2461	False	NA	NA	False	NA	NA	NA	90806762	90809266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90806800_90809300
ES.19514.135	chr2	+	3414	13	NIC	ENSMUSG00000005506.17	novel	7800	13	NA	NA	-23	1854	intron_retention	FALSE	canonical	3	193	junction_1	178.754234604076	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	1754	False	NA	NA	False	NA	NA	NA	90818067	90845571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.136	chr2	+	4328	13	NNC	ENSMUSG00000005506.17	novel	4441	13	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	192.093221003646	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	NA	False	NA	10	True	ATTAAA	-10	NA	90828923	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.137	chr2	+	4436	13	FSM	ENSMUSG00000005506.17	ENSMUST00000111449.8	4441	13	0	5	0	2	multi-exon	FALSE	canonical	3	395	junction_6	110.098030812948	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	NA	False	NA	10	True	ATTAAA	-10	NA	90828923	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.138	chr2	+	4254	12	NIC	ENSMUSG00000005506.17	novel	4441	13	NA	NA	2425	-3	combination_of_known_junctions	FALSE	canonical	3	185	junction_7	161.346196240638	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	NA	False	NA	12	True	ATTAAA	-12	NA	90831348	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.139	chr2	+	4168	11	NIC	ENSMUSG00000005506.17	novel	4441	13	NA	NA	2882	2	combination_of_known_junctions	FALSE	canonical	3	185	junction_6	162.403848476568	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	NA	False	NA	10	True	ATTAAA	-10	NA	90831805	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.14	chr2	+	4512	13	NIC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	232.925357619608	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2293	False	NA	13	True	ATTAAA	-13	NA	90770717	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.140	chr2	+	5198	9	NNC	ENSMUSG00000005506.17	novel	4441	13	NA	NA	5268	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	236.56024602625	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	NA	False	NA	13	True	ATTAAA	-13	NA	90834191	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90834236_90835045_90835208_90836964_90837578_90837805_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.141	chr2	+	3720	8	NNC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	6252	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	220.390377211318	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	NA	False	NA	13	True	ATTAAA	-13	NA	90835175	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843084_90843188_90843582_90843748_90846910
ES.19514.143	chr2	+	194	1	Intergenic	novelGene_16187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	90837592	90837786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90837600_90837800
ES.19514.144	chr2	+	4353	5	ISM	ENSMUSG00000005506.17	ENSMUST00000111448.2	4432	13	9806	5	-4104	2	3prime_fragment	FALSE	canonical	3	540	junction_4	39.134383858699	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	NA	False	NA	10	True	ATTAAA	-10	NA	90838729	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.145	chr2	+	3427	4	ISM	ENSMUSG00000005506.17	ENSMUST00000111448.2	4432	13	11812	2	-2098	-2	3prime_fragment	FALSE	canonical	3	540	junction_3	45.0653845971483	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	NA	False	NA	13	True	ATTAAA	-13	NA	90840735	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.146	chr2	+	6501	4	ISM	ENSMUSG00000005506.17	ENSMUST00000111455.9	7579	14	22645	-4	-2098	-3	3prime_fragment	FALSE	canonical	3	151	junction_3	224.972590923131	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	NA	False	NA	12	True	ATTAAA	-12	NA	90840735	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.147	chr2	+	1653	1	Genic_Genomic	ENSMUSG00000005506.17	novel	NA	NA	NA	NA	-1542	-773	mono-exon	FALSE	NA	NA	NA	NA	NA	752	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTTAGTGTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	90841291	90842944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_90841300_90842900
ES.19514.148	chr2	+	1997	2	NNC	ENSMUSG00000005506.17	novel	7851	13	NA	NA	3504	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	NA	False	NA	13	True	ATTAAA	-13	NA	90846337	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90846613_90848118
ES.19514.15	chr2	+	4388	12	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	226.249587917985	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2303	False	NA	13	True	ATTAAA	-13	NA	90770727	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90843043_90843188_90843582_90843748_90846910
ES.19514.16	chr2	+	3489	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	3	1854	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	2305	False	NA	NA	False	NA	NA	NA	90770729	90845571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.17	chr2	+	2203	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-28	-2433	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGCTCCTGAACACAT	2350	False	NA	NA	False	AATAAA	-29	NA	90770774	90847402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.18	chr2	+	7849	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	222.666585196938	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2365	False	NA	12	True	ATTAAA	-12	NA	90770789	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.19	chr2	+	2164	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-12	-2468	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	161.021958148313	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAATGAAATAAAA	2366	False	NA	NA	False	TTTAAA	-11	NA	90770790	90847367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.2	chr2	+	7834	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	-216	-4	-55	4	multi-exon	FALSE	canonical	3	151	junction_13	169.345415711454	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTCTGCGTTGTCAAT	2247	False	NA	19	True	ATTAAA	-19	NA	90770671	90849846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.20	chr2	+	2337	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	51	2442	-10	-2442	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAATCTTTGAGGCTCC	2368	False	NA	NA	False	AATAAA	-20	NA	90770792	90847393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.21	chr2	+	5256	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	-10	-2435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	239.650213544806	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2368	False	NA	NA	False	AATAAA	-27	NA	90770792	90847400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840736_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.23	chr2	+	2287	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	5	-2468	combination_of_known_junctions	FALSE	canonical	3	185	junction_10	218.293848016	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAATGAAATAAAA	2383	False	NA	NA	False	TTTAAA	-11	NA	90770807	90847367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.24	chr2	+	7681	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTCTGCGTTGTCA	2386	False	NA	17	True	ATTAAA	-17	NA	90770810	90849844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.25	chr2	+	4478	13	NNC	ENSMUSG00000005506.17	novel	7851	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_3	216.012393548765	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2389	False	NA	15	True	ATTAAA	-15	NA	90770813	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90833644_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.26	chr2	+	4573	14	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	266.840355171269	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2393	False	NA	11	True	ATTAAA	-11	NA	90770817	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834153_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.27	chr2	+	4723	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	30	junction_2	231.48316155097	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2393	False	NA	14	True	ATTAAA	-14	NA	90770817	90849841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90829417_90829545_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.3	chr2	+	4749	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	-59	-12	-44	5	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGCGTTGTCAATT	2258	False	NA	20	True	ATTAAA	-20	NA	90770682	90849847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.30	chr2	+	4475	14	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	277.690091616983	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2394	False	NA	15	True	ATTAAA	-15	NA	90770818	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.31	chr2	+	3222	16	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	17	-2440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	277.294228012212	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTTGAGGCTCCTG	2395	False	NA	NA	False	AATAAA	-22	NA	90770819	90847395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90839932_90840924_90843043_90843188_90843582_90843748_90843835_90843941_90846910
ES.19514.32	chr2	+	7757	13	NIC	ENSMUSG00000005506.17	novel	7851	13	NA	NA	17	3	intron_retention	FALSE	canonical	3	185	junction_9	181.107012564395	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2395	False	NA	11	True	ATTAAA	-11	NA	90770819	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.33	chr2	+	4598	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.202925077483	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2395	False	NA	15	True	ATTAAA	-15	NA	90770819	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770975_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.34	chr2	+	4603	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	200.779192207929	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2395	False	NA	13	True	ATTAAA	-13	NA	90770819	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840928_90843049_90843188_90843582_90843748_90846910
ES.19514.35	chr2	+	3410	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	-68	4272	17	1853	multi-exon	FALSE	canonical	3	151	junction_13	169.345415711454	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTAGGTTGGGCAGGCAC	2395	False	NA	NA	False	NA	NA	NA	90770819	90845570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.37	chr2	+	4566	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	224.268224870111	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2395	False	NA	15	True	ATTAAA	-15	NA	90770819	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837045_90838564_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.38	chr2	+	7769	13	ISM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	-68	1	17	-1	intron_retention	FALSE	canonical	3	395	junction_7	115.465603343834	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTCTTCTGCGTTG	2395	False	NA	14	True	ATTAAA	-14	NA	90770819	90849841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.40	chr2	+	6720	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	19	2	intron_retention	FALSE	canonical	3	395	junction_7	117.94631547163	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2397	False	NA	10	True	ATTAAA	-10	NA	90770821	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90843188_90843582_90843748_90846910
ES.19514.41	chr2	+	4658	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	239.576624869108	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2397	False	NA	15	True	ATTAAA	-15	NA	90770821	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.42	chr2	+	4561	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_11	257.01366436172	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2398	False	NA	15	True	ATTAAA	-15	NA	90770822	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.43	chr2	+	4580	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.373435225365	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2398	False	NA	15	True	ATTAAA	-15	NA	90770822	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770975_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.44	chr2	+	5477	14	ISM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	81	2435	20	-2435	intron_retention	FALSE	canonical	3	193	junction_2	192.172013675865	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2398	False	NA	NA	False	AATAAA	-27	NA	90770822	90847400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.45	chr2	+	2375	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	201.478205907292	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	2398	False	NA	8	True	ATTAAA	-8	NA	90770822	90849835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90849132
ES.19514.46	chr2	+	7905	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	20	-2	intron_retention	FALSE	canonical	3	193	junction_2	202.634045049241	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2398	False	NA	13	True	ATTAAA	-13	NA	90770822	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.47	chr2	+	4643	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	246.537336245984	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2398	False	NA	13	True	ATTAAA	-13	NA	90770822	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.49	chr2	+	2164	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	21	-2440	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	201.687173554322	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTTTGAGGCTCCTG	2399	False	NA	NA	False	AATAAA	-22	NA	90770823	90847395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843196_90843582_90843748_90846910
ES.19514.5	chr2	+	7769	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-30	-2	combination_of_known_splicesites	FALSE	canonical	3	55	junction_11	254.615895886077	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2272	False	NA	13	True	ATTAAA	-13	NA	90770696	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.50	chr2	+	3221	13	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	21	1854	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	229.361235584588	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	2399	False	NA	NA	False	NA	NA	NA	90770823	90845571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.51	chr2	+	5234	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	22	-2439	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	200.669205852604	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTTGAGGCTCCTGA	2400	False	NA	NA	False	AATAAA	-23	NA	90770824	90847396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.52	chr2	+	7598	13	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	286.07414540057	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2400	False	NA	12	True	ATTAAA	-12	NA	90770824	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.53	chr2	+	7477	13	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	22	2	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	256.7518662704	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2400	False	NA	10	True	ATTAAA	-10	NA	90770824	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.55	chr2	+	3558	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	22	1854	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	215.029720299881	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	2400	False	NA	NA	False	NA	NA	NA	90770824	90845571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.56	chr2	+	4414	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	196.537245551292	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2400	False	NA	13	True	ATTAAA	-13	NA	90770824	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
ES.19514.57	chr2	+	4688	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	237.267017840875	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2400	False	NA	10	True	ATTAAA	-10	NA	90770824	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90829417_90829521_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.59	chr2	+	4587	14	NNC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.647132383252	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2400	False	NA	12	True	ATTAAA	-12	NA	90770824	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831422_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.60	chr2	+	2427	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	85	2166	24	-2166	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCTTCTTCCTACAGT	2402	False	NA	NA	False	NA	NA	NA	90770826	90847669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.61	chr2	+	3356	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	26	1854	combination_of_known_splicesites	FALSE	canonical	3	55	junction_11	259.906036730573	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	2404	False	NA	NA	False	NA	NA	NA	90770828	90845571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.62	chr2	+	7588	15	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	27	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	242.802304733035	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2405	False	NA	11	True	ATTAAA	-11	NA	90770829	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835_90846010_90846092
ES.19514.63	chr2	+	7486	13	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	27	-3	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	250.075599680488	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2405	False	NA	12	True	ATTAAA	-12	NA	90770829	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.64	chr2	+	2204	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	27	-2439	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	239.576624869108	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTTGAGGCTCCTGA	2405	False	NA	NA	False	AATAAA	-23	NA	90770829	90847396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.66	chr2	+	4440	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	258.571744277629	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2405	False	NA	12	True	ATTAAA	-12	NA	90770829	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843049_90843188_90843582_90843748_90846910_90849636_90849786
ES.19514.69	chr2	+	4615	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	242.201906089959	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2406	False	NA	11	True	ATTAAA	-11	NA	90770830	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.7	chr2	+	5768	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-26	-2166	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	222.666585196938	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCTTCTTCCTACAGT	2276	False	NA	NA	False	NA	NA	NA	90770700	90847669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.70	chr2	+	4655	15	NNC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.127155375621	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2406	False	NA	11	True	ATTAAA	-11	NA	90770830	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90784626_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.71	chr2	+	4629	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_6	230.813910379097	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2406	False	NA	16	True	ATTAAA	-16	NA	90770830	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833583_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.72	chr2	+	3706	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	-607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	204.264047302525	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTGGAGACAAACCT	2406	False	NA	NA	False	AAAAAG	-18	NA	90770830	90849228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910_90847962_90848225
ES.19514.74	chr2	+	3493	14	ISM	ENSMUSG00000005506.17	ENSMUST00000177642.8	7806	15	89	4312	28	1806	intron_retention	FALSE	canonical	3	14	junction_1	248.610862487433	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	2406	False	NA	NA	False	TTTAAA	-8	NA	90770830	90845523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.75	chr2	+	5378	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	-2441	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	234.180464163684	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAATCTTTGAGGCTCCT	2406	False	NA	NA	False	AATAAA	-21	NA	90770830	90847394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.78	chr2	+	7479	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	28	-173	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCAAGGGAGTATGTGT	2406	False	NA	NA	False	ATTAAA	-24	NA	90770830	90849662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ES.19514.79	chr2	+	4635	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_10	244.585242458335	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2406	False	NA	13	True	ATTAAA	-13	NA	90770830	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.8	chr2	+	4708	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2283	False	NA	16	True	ATTAAA	-16	NA	90770707	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.81	chr2	+	4849	16	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	260.921665554157	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2407	False	NA	11	True	ATTAAA	-11	NA	90770831	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818009_90818162_90828924_90829113_90829417_90829521_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.84	chr2	+	4420	13	NIC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	226.041232718478	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2409	False	NA	13	True	ATTAAA	-13	NA	90770833	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.86	chr2	+	4471	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	226.940206095917	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2410	False	NA	10	True	ATTAAA	-10	NA	90770834	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910_90848305_90848411
ES.19514.88	chr2	+	7901	14	ISM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	94	-2	33	2	intron_retention	FALSE	canonical	3	193	junction_2	192.172013675865	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2411	False	NA	10	True	ATTAAA	-10	NA	90770835	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ES.19514.89	chr2	+	4750	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.64945603949	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2411	False	NA	15	True	ATTAAA	-15	NA	90770835	90849842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90818002_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.9	chr2	+	4860	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	-19	1	combination_of_known_junctions	FALSE	canonical	3	193	junction_2	195.382630878437	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTTCTGCGTTGTC	2283	False	NA	16	True	ATTAAA	-16	NA	90770707	90849843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.90	chr2	+	7648	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	257.403741990152	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCTTCTGCGTT	2411	False	NA	13	True	ATTAAA	-13	NA	90770835	90849840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843589_90843748_90843835
ES.19514.91	chr2	+	3979	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	33	-593	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGTGTGAGTTTTTTA	2411	False	NA	NA	False	AAAAAG	-32	NA	90770835	90849242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.92	chr2	+	7786	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.955349593556	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTTTGTCTTCTGCGT	2411	False	NA	12	True	ATTAAA	-12	NA	90770835	90849839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90780736_90780891_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.93	chr2	+	4688	15	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	246.973817087016	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTTTGTCTTCTGCG	2416	False	NA	11	True	ATTAAA	-11	NA	90770840	90849838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90829417_90829521_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.94	chr2	+	4141	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	99	590	38	-590	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGAGTTTTTTATTG	2416	False	NA	NA	False	AAAAAG	-35	NA	90770840	90849245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.96	chr2	+	2170	14	NNC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	226.83215910088	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2417	False	NA	10	True	ATTAAA	-10	NA	90770841	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90849323
ES.19514.97	chr2	+	4825	16	NNC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	270.413132488461	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTGTCTTCTGC	2417	False	NA	10	True	ATTAAA	-10	NA	90770841	90849837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90770987_90783501_90783604_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ES.19514.98	chr2	+	6874	13	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	39	-593	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	229.361235584588	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGTGTGAGTTTTTTA	2417	False	NA	NA	False	AAAAAG	-32	NA	90770841	90849242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90843835
ES.19514.99	chr2	+	1956	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	39	-2439	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	224.163305427093	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTTGAGGCTCCTGA	2417	False	NA	NA	False	AATAAA	-23	NA	90770841	90847396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
ES.19515.1	chr2	-	4764	15	Antisense	novelGene_ENSMUSG00000005506.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGCACTTCCGGCACCT	NA	False	NA	NA	False	NA	NA	NA	90846791	90770825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90770984_90818006_90818162_90828924_90829111_90831348_90831433_90831805_90831855_90833554_90833689_90834153_90834234_90835043_90835208_90836976_90837039_90838514_90838645_90839549_90839659_90840735_90840920_90843039_90843186_90843580_90843745_90843832
ES.19515.2	chr2	-	174	1	Intergenic	novelGene_16181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATTAAAAAAAAT	4660	False	NA	NA	False	NA	NA	NA	90778497	90778323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90778300_90778500
ES.19515.3	chr2	-	1380	1	Intergenic	novelGene_16182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGACAGACATATATAATA	5	True	NA	NA	False	NA	NA	NA	90783152	90781772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90781800_90783200
ES.19515.4	chr2	-	248	1	Intergenic	novelGene_16183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGCAGCAGGTAATTAA	NA	False	NA	NA	False	AAAAAG	-41	NA	90794541	90794293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90794300_90794500
ES.19515.5	chr2	-	364	1	Intergenic	novelGene_16185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	90809982	90809618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90809600_90810000
ES.19515.6	chr2	-	158	1	Intergenic	novelGene_16186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	90809981	90809823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90809800_90810000
ES.19516.1	chr2	-	591	1	Antisense	novelGene_ENSMUSG00000005506.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAGAAAGAAACAAACATA	NA	False	NA	NA	False	NA	NA	NA	90847668	90847077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_90847100_90847700
ES.19517.1	chr2	+	175	1	Intergenic	novelGene_16188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAATGTGGA	4865	False	NA	NA	False	NA	NA	NA	90852409	90852584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90852400_90852600
ES.19518.1	chr2	+	157	1	Intergenic	novelGene_16189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	8795	False	NA	NA	False	NA	NA	NA	90856339	90856496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90856300_90856500
ES.19519.1	chr2	-	1654	1	FSM	ENSMUSG00000082108.4	ENSMUST00000118208.2	345	1	-250	-1059	-250	1059	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	AATAAA	-44	NA	90861717	90860063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90860100_90861700
ES.1952.1	chr1	+	7987	51	NNC	ENSMUSG00000026532.8	novel	8406	52	NA	NA	40	-377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.0816653826392	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCTCTCATGTTCCCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	174000381	174075639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_174000528_174001892_174002130_174003328_174003455_174006223_174006365_174007296_174007444_174008569_174008704_174009270_174009416_174012146_174012302_174013196_174013333_174014763_174014866_174017661_174017800_174018513_174018625_174020485_174020564_174021094_174021251_174023421_174023627_174025168_174025351_174025927_174026172_174026986_174027110_174029816_174030035_174030818_174030912_174032836_174032975_174034602_174034755_174035877_174036065_174036859_174036962_174039129_174039222_174040103_174040249_174040909_174041092_174041427_174041528_174041621_174041820_174043043_174043188_174044697_174044802_174045090_174045254_174045442_174045575_174045968_174046107_174046289_174046395_174047331_174047541_174050144_174050266_174050826_174050949_174051993_174052127_174056807_174056907_174058191_174058355_174058892_174058965_174065350_174065561_174067682_174067980_174068606_174068722_174070694_174070766_174071609_174071798_174072704_174072759_174073212_174073360_174074039_174074185_174074897
ES.1952.3	chr1	+	3300	6	NNC	ENSMUSG00000026532.8	novel	4437	22	NA	NA	24822	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	0.489897948556636	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACAAGTAGTCTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	174067872	174076009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_174067980_174068606_174068722_174070694_174070766_174071609_174073360_174074039_174074185_174074897
ES.19520.1	chr2	+	1656	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	-50	0	-29	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865935	90876074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ES.19520.2	chr2	+	1533	9	NNC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.0464304802626	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865937	90876074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90866334_90866891_90866989_90867109_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ES.19520.3	chr2	+	2198	7	NIC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	40	junction_3	11.1865494630332	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865951	90876074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ES.19520.4	chr2	+	704	4	NIC	ENSMUSG00000002104.12	novel	1606	8	NA	NA	175	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.0631496343164	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAGTGATTCTGACCC	NA	False	NA	5	True	AATAAA	-13	NA	90873304	90876072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90873404_90873484_90873608_90875184_90875385_90875790
ES.19521.1	chr2	-	485	2	NIC	ENSMUSG00000086495.8	novel	537	3	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGCATATATGTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	90884304	90874436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90874815_90884197
ES.19522.1	chr2	+	1625	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	18	-7	18	5	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTCAGCCTCTGTGGA	NA	False	NA	25	True	AATAAA	-26	NA	90884371	90889784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.10	chr2	+	1897	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1724	junction_1	118.679568587015	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACAGTCTTTCTCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	90884411	90889776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.11	chr2	+	1705	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	12	1	intron_retention	FALSE	canonical	3	4	junction_6	592.515113731287	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCTTTCTCAGCCTC	NA	False	NA	19	True	AATAAA	-20	NA	90884411	90889778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90886986_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.13	chr2	+	1872	7	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	16	1	intron_retention	FALSE	non_canonical	0	0	junction_5	719.046977293943	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTTCTCAGCCTCTG	NA	False	NA	21	True	AATAAA	-22	NA	90884415	90889780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886346_90888711_90889473_90889598
ES.19522.14	chr2	+	2278	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	18	0	intron_retention	FALSE	canonical	3	1724	junction_1	118.825460234749	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTTCTCAGCCTCT	NA	False	NA	20	True	AATAAA	-21	NA	90884417	90889779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.15	chr2	+	1446	11	FSM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	-27	0	18	0	multi-exon	FALSE	canonical	0	0	junction_2	599.044247113684	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884417	90889777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90884677_90884919_90885004_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.16	chr2	+	2544	9	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	1724	junction_1	127.794207126145	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCACAGTCTTTCTCAGC	NA	False	NA	16	True	AATAAA	-17	NA	90884421	90889775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90888501_90889390
ES.19522.17	chr2	+	1942	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-18	5253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	748.854199140425	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGGTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	90884421	90901967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884923_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90901410
ES.19522.18	chr2	+	2461	10	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	1724	junction_1	120.810329866569	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGCCACAGTCTTTCTC	NA	False	NA	13	True	AATAAA	-14	NA	90884421	90889772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886388_90887002_90887147_90887256_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.21	chr2	+	2588	9	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1724	junction_1	119.65307925415	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCACAGTCTTTCTCAG	NA	False	NA	15	True	AATAAA	-16	NA	90884443	90889774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885450_90885802_90885908_90885992_90886056_90886249_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.22	chr2	+	3243	7	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	9	-1	intron_retention	FALSE	canonical	3	1724	junction_1	124.631456703354	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACAGTCTTTCTCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	90884453	90889776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.23	chr2	+	1479	11	ISM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	279	4	10	-4	intron_retention	FALSE	canonical	3	1724	junction_1	118.690184935402	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCCACAGTCTTTCTCA	NA	False	NA	14	True	AATAAA	-15	NA	90884632	90889773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390
ES.19522.24	chr2	+	1341	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	867.890165195444	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCTCAGCCTCTGTG	NA	False	NA	23	True	AATAAA	-24	NA	90884634	90889782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886053_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888496_90889390_90889462_90889598
ES.19522.26	chr2	+	1362	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	573.112280404471	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884674	90889777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884724_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.27	chr2	+	1316	11	ISM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	564	-1	0	1	3prime_fragment	FALSE	canonical	3	1842	junction_5	92.7459433075108	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCTTTCTCAGCCTC	NA	False	NA	19	True	AATAAA	-20	NA	90884917	90889778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.28	chr2	+	1149	10	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	472	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	631.592695756793	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGCCACAGTCTTTCTC	NA	False	NA	13	True	AATAAA	-14	NA	90885389	90889772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90885450_90885802_90885908_90885992_90886060_90886262_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.29	chr2	+	2060	1	NIC	ENSMUSG00000002102.16	novel	1819	13	NA	NA	5119	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATGGCTCTAATTTTT	3316	False	NA	NA	False	NA	NA	NA	90893572	90895632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90893600_90895600
ES.19522.3	chr2	+	1722	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	570.820751706271	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACAGTCTTTCTCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	90884375	90889776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888000_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.4	chr2	+	1715	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1724	junction_1	111.704073336651	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884384	90889777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.5	chr2	+	3855	5	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1724	junction_1	74.1383841205081	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884391	90889777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90886388_90887002
ES.19522.6	chr2	+	1730	12	NNC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	762.253054443381	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCAGCCTCTGTGGACT	NA	False	NA	27	True	AATAAA	-28	NA	90884393	90889786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90886986_90887147_90887256_90887406_90888000_90888207_90888354_90888501_90889390_90889473_90889598
ES.19522.7	chr2	+	2554	13	NNC	ENSMUSG00000002102.16	novel	1819	13	NA	NA	-4	1903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	853.334256998198	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTATACCCTATGC	NA	False	NA	NA	False	AATAAA	-25	NA	90884395	90898617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90886986_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90894241_90894310_90897562
ES.19522.9	chr2	+	1519	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	594.15089834149	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACAGTCTTTCTCAGCC	NA	False	NA	17	True	AATAAA	-18	NA	90884406	90889776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ES.19523.1	chr2	-	2433	10	NNC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	18.3753726761569	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4258	False	NA	0	True	AATAAA	-15	NA	90900671	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899101_90900499
ES.19523.11	chr2	-	5511	6	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-28	-6	intron_retention	FALSE	canonical	0	0	junction_3	20.4195984289604	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTGCCTCTTCCACAT	4258	False	NA	-6	True	AATAAA	-9	NA	90900671	90892141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90895059_90895150_90895250_90899085_90900499
ES.19523.14	chr2	-	1241	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	44	6	0	-6	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGAGCAATGAGACTCC	4345	False	NA	NA	False	NA	NA	NA	90900584	90893224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
ES.19523.15	chr2	-	191	1	Intergenic	novelGene_16190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCTTACCTAACACGT	6751	False	NA	NA	False	NA	NA	NA	90898178	90897987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_90898000_90898200
ES.19523.2	chr2	-	2377	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	92	0	-27	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4259	False	NA	0	True	AATAAA	-15	NA	90900670	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ES.19523.3	chr2	-	2275	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	17.0105665690476	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4259	False	NA	0	True	AATAAA	-15	NA	90900670	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ES.19523.5	chr2	-	2109	10	NNC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	21.201560622735	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4378	False	NA	0	True	AATAAA	-15	NA	90900551	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90898961_90899007_90899085_90900499
ES.19523.6	chr2	-	2418	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	-44	-1083	-29	0	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4257	False	NA	0	True	AATAAA	-15	NA	90900672	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
ES.19523.7	chr2	-	3922	7	NNC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	1255	0	intron_retention	FALSE	canonical	0	0	junction_3	22.3488751891951	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	6968	False	NA	0	True	AATAAA	-15	NA	90897961	90892135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90893324_90893408_90893509_90893664_90893725_90894000_90894052_90894763_90895150_90895250_90895353_90895926
ES.19523.8	chr2	-	5745	6	ISM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	464	1	422	-1	intron_retention	FALSE	canonical	1	5	junction_5	19.8836616346185	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTTCCACATACTAG	4819	False	NA	-1	True	AATAAA	-14	NA	90900110	90892136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926
ES.19523.9	chr2	-	5906	7	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5	junction_5	19.0146142626022	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCTCTTCCACATACTA	4345	False	NA	-2	True	AATAAA	-13	NA	90900584	90892137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357
ES.19524.1	chr2	+	1557	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	469	8	-215	-8	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCCCAGAGAAGTGTCT	9086	False	NA	13	True	AGTAAA	-14	NA	90926909	90946093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
ES.19524.3	chr2	+	1147	4	NNC	ENSMUSG00000002111.9	novel	544	4	NA	NA	8988	-8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	12.9614813968157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCCCAGAGAAGTGTCT	NA	False	NA	13	True	AGTAAA	-14	NA	90936112	90946093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90936229_90943599_90943791_90944589_90944756_90945419
ES.19525.1	chr2	+	3293	23	NNC	ENSMUSG00000002100.16	novel	4163	35	NA	NA	4618	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.53243423221529	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGTCTCCTGTTCATG	NA	False	NA	NA	False	AATAAA	-22	NA	90953106	90966861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90953364_90954230_90954364_90954725_90954854_90954931_90955038_90955121_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90961823_90961908_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
ES.19525.2	chr2	+	3376	21	NNC	ENSMUSG00000002100.16	novel	4134	34	NA	NA	4695	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	2.64764045897475	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGGGTTGATGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	90953183	90966851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_90953364_90954230_90954364_90954725_90954854_90954931_90955289_90955603_90955770_90956290_90956398_90956608_90956639_90958997_90959138_90959344_90959426_90961131_90961292_90961717_90962098_90962983_90963119_90963197_90963366_90964515_90964605_90964758_90964955_90965134_90965275_90965436_90965597_90965691_90965829_90966080_90966268_90966448_90966487_90966587
ES.19526.1	chr2	+	168	1	Intergenic	novelGene_16191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACTAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	90998835	90999003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_90998800_90999000
ES.19527.1	chr2	-	5910	33	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-36	1	intron_retention	TRUE	canonical	2	6	junction_12	4.88460592064498	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTCCTGTGCACTCCT	NA	False	NA	0	True	AATAAA	-16	NA	91013270	90967703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.10	chr2	-	6065	34	NIC	ENSMUSG00000040687.17	novel	5977	35	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_12	5.93227774062537	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013370	90967705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988752_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90994307_90994368_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.13	chr2	-	5996	33	NIC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_22	4.65991885658967	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013370	90967705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988761_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.14	chr2	-	2859	16	NNC	ENSMUSG00000040687.17	novel	5927	34	NA	NA	-2518	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	6.82609372595744	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGGCTCCTGTGCACT	NA	False	NA	-3	True	AATAAA	-13	NA	90993220	90967706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90968747_90969053_90969101_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988761_90988873_90989549_90989651_90992372_90992580_90992826_90992978_90993071
ES.19527.16	chr2	-	4996	13	NNC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	210	-2	intron_retention	FALSE	canonical	1	1	junction_12	6.48234782569813	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTCCTGTGCAC	NA	False	NA	-4	True	AATAAA	-12	NA	90990492	90967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90968747_90969053_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90990471
ES.19527.17	chr2	-	4848	31	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-560	-2	intron_retention	FALSE	canonical	0	0	junction_15	6.50094010295605	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTCCTGTGCAC	NA	False	NA	-4	True	AATAAA	-12	NA	91006634	90967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90990661_90990716_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90994307_90994368_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500
ES.19527.18	chr2	-	5833	33	NIC	ENSMUSG00000040687.17	novel	5977	35	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_14	6.7195493710516	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTCCTGTGCAC	NA	False	NA	-4	True	AATAAA	-12	NA	91013391	90967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988752_90988834_90989549_90989651_90990661_90990716_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013315
ES.19527.19	chr2	-	5930	34	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_15	5.80395989073177	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTCCTGTGCAC	NA	False	NA	-4	True	AATAAA	-12	NA	91013240	90967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90990661_90990716_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.2	chr2	-	3569	22	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-6775	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	6.28030069907073	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGTGCACTCC	NA	False	NA	-1	True	AATAAA	-15	NA	90997477	90967704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985357_90985421_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258
ES.19527.20	chr2	-	5877	33	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	-24	-2	intron_retention	FALSE	canonical	0	0	junction_32	5.39531046372681	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTCCTGTGCAC	NA	False	NA	-4	True	AATAAA	-12	NA	91013416	90967707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013315
ES.19527.21	chr2	-	5923	32	NIC	ENSMUSG00000040687.17	novel	5977	35	NA	NA	1	-3	intron_retention	FALSE	canonical	1	2	junction_2	5.18181403276259	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTGGGCTCCTGTGCA	NA	False	NA	-5	True	AATAAA	-11	NA	91013370	90967708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988761_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.22	chr2	-	173	1	ISM	ENSMUSG00000040687.17	ENSMUST00000135910.2	562	3	9030	18	-4205	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	90973806	90973633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_90973600_90973800
ES.19527.3	chr2	-	5936	32	NIC	ENSMUSG00000040687.17	novel	5977	35	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_11	5.67925190365982	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGTGCACTCC	NA	False	NA	-1	True	AATAAA	-15	NA	91013370	90967704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988752_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.4	chr2	-	5881	33	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_20	5.42563360355268	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGTGCACTCC	NA	False	NA	-1	True	AATAAA	-15	NA	91013371	90967704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997387_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.6	chr2	-	11528	29	NNC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_21	5.43279910565898	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013369	90967705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90968747_90969053_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985994_90988329_90988834_90989549_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000555_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.8	chr2	-	7850	32	NIC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	-19	0	intron_retention	FALSE	canonical	2	6	junction_11	4.96145391734978	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013411	90967705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_90968747_90969053_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19527.9	chr2	-	6048	33	NNC	ENSMUSG00000040687.17	novel	5974	36	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_13	5.50816155808814	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCTCCTGTGCACTC	NA	False	NA	-2	True	AATAAA	-14	NA	91013371	90967705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988873_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
ES.19528.1	chr2	-	2123	7	NIC	ENSMUSG00000002108.11	novel	1738	10	NA	NA	-25	-1	intron_retention	TRUE	canonical	0	0	junction_6	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCCTCTACCACTTCC	NA	False	NA	NA	False	NA	NA	NA	91025405	91014406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91015095_91015286_91015401_91020529_91021293_91022133_91022401_91022904_91023088_91023961_91024042_91025377
ES.19529.1	chr2	+	167	1	Intergenic	novelGene_16192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAGAAAGAAAAAAAAAA	3453	False	NA	NA	False	NA	NA	NA	91031649	91031816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91031600_91031800
ES.1953.1	chr1	+	2239	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	174098777	174101016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_174098800_174101000
ES.19530.1	chr2	+	2228	11	FSM	ENSMUSG00000002103.17	ENSMUST00000002172.14	4656	11	-16	2444	8	-488	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTCCTATACATCA	5041	False	NA	NA	False	CATAAA	-20	NA	91033237	91041999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.10	chr2	+	2014	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	14	2624	2	-669	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGTTCTGTGCCTTT	5074	False	NA	2	True	AATGAA	-14	NA	91033270	91041818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.11	chr2	+	2768	11	NNC	ENSMUSG00000002103.17	novel	4656	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.5603803305971	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACCACTGTCTCCAAGA	5074	False	NA	8	True	AATAAA	-22	NA	91033270	91042485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91036974_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.12	chr2	+	4415	9	ISM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	1326	6	1310	-6	3prime_fragment	FALSE	canonical	3	45	junction_5	11.8532695911297	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCTGGTAAAGACT	6386	False	NA	1	True	NA	NA	NA	91034582	91044436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.13	chr2	+	3852	4	ISM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	4904	6	4888	-6	3prime_fragment	FALSE	canonical	3	49	junction_3	4.08248290463863	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCTGGTAAAGACT	2461	False	NA	1	True	NA	NA	NA	91038160	91044436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.3	chr2	+	4651	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	2	-1	2	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAAAGACTTATTTCT	5062	False	NA	8	True	NA	NA	NA	91033258	91044443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.4	chr2	+	2696	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	3	1953	3	2	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTGTCTCCAAGATATA	5063	False	NA	12	True	AATAAA	-26	NA	91033259	91042489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.5	chr2	+	4312	7	NIC	ENSMUSG00000002103.17	novel	3124	10	NA	NA	-5	9	intron_retention	FALSE	canonical	3	45	junction_3	12.4286854583348	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAAGATATATTTACTG	5067	False	NA	19	True	AATAAA	-33	NA	91033263	91042496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91034672_91036100_91036254_91036354_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.6	chr2	+	4724	11	NNC	ENSMUSG00000002103.17	novel	4656	11	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_6	21.5603803305971	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCACCTGGTAAAGACTT	5070	False	NA	2	True	NA	NA	NA	91033266	91044437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91036974_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.7	chr2	+	3022	10	FSM	ENSMUSG00000002103.17	ENSMUST00000124131.2	3124	10	-1	103	-1	-103	multi-exon	FALSE	canonical	3	45	junction_6	11.063230167017	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTGTTGCTGGTCTGT	5071	False	NA	-93	True	AAGAAA	-18	NA	91033267	91042384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19530.8	chr2	+	4554	11	NNC	ENSMUSG00000002103.17	novel	4656	11	NA	NA	-1	-6	intron_retention	FALSE	non_canonical	0	0	junction_10	21.6381607351457	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCTGGTAAAGACT	5071	False	NA	1	True	NA	NA	NA	91033267	91044436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91041032
ES.19530.9	chr2	+	3682	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	11	959	-1	-959	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	5071	False	NA	NA	False	NA	NA	NA	91033267	91043483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ES.19531.1	chr2	+	159	1	Intergenic	novelGene_16195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAACTA	6775	False	NA	NA	False	NA	NA	NA	91061369	91061528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91061400_91061500
ES.19532.1	chr2	-	1986	11	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTAGGCTGTGTAGCA	NA	False	NA	NA	False	NA	NA	NA	91039584	91033277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91033393_91033944_91034040_91034582_91034670_91036098_91036253_91036353_91036454_91036532_91036621_91036972_91037194_91038160_91038243_91038382_91038491_91038604_91039354_91039397
ES.19532.2	chr2	-	6084	1	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTAGGGCTCCAAATCA	NA	False	NA	NA	False	NA	NA	NA	91039672	91033588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91033600_91039700
ES.19532.3	chr2	-	2711	8	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTAGGGCTCCAAATCA	NA	False	NA	NA	False	NA	NA	NA	91039672	91033588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91034040_91034582_91034670_91036098_91036253_91036353_91036454_91036532_91037194_91038160_91038243_91038382_91038491_91038604
ES.19532.4	chr2	-	5521	2	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91039672	91033608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91034040_91034582
ES.19532.5	chr2	-	4635	2	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91039672	91033608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91034670_91036098
ES.19532.6	chr2	-	4983	3	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91039672	91033608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91037194_91038160_91038491_91038604
ES.19532.7	chr2	-	1867	4	Antisense	novelGene_ENSMUSG00000002103.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	91039672	91037507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91038243_91038382_91038491_91038604_91039354_91039397
ES.19533.1	chr2	-	3303	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	51	-1797	-24	1513	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAACAGACAT	3048	False	NA	NA	False	AATACA	-11	NA	91067276	91040403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ES.19533.10	chr2	-	2317	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	-70	-19	5	4	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCAAAAGCCCAACA	3024	False	NA	-38	True	AATAAA	-23	NA	91067300	91041928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ES.19533.12	chr2	-	1936	7	NNC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_4	49.386232899463	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACCCAAAAGCCC	3083	False	NA	-42	True	AATAAA	-19	NA	91067241	91041932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047397_91047547_91047651_91047752_91064452_91065297_91067034
ES.19533.13	chr2	-	1235	6	NIC	ENSMUSG00000002109.15	novel	1592	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	40.7892142606351	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACCCAAAAGCCC	3020	False	NA	-42	True	AATAAA	-19	NA	91067304	91041932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91064452_91064645_91065159_91065297_91067034
ES.19533.14	chr2	-	1766	10	NNC	ENSMUSG00000002109.15	novel	1557	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	30.5606056432779	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACCCAAAAGCCC	3029	False	NA	-42	True	AATAAA	-19	NA	91067295	91041932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047549_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ES.19533.15	chr2	-	2250	9	NNC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	32.8859297420645	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACCCAAAAGCCC	3077	False	NA	-42	True	AATAAA	-19	NA	91067247	91041932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047144_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ES.19533.16	chr2	-	2193	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	-60	95	15	-77	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGGTACTTTTCTTTT	3034	False	NA	0	True	NA	NA	NA	91067290	91042042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ES.19533.17	chr2	-	1633	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	51	-127	-24	-108	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTAGCCTGGAGGCCAA	3048	False	NA	-31	True	ATTAAA	-32	NA	91067276	91042073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ES.19533.18	chr2	-	177	1	Intergenic	novelGene_16193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCCAGGACA	7958	False	NA	NA	False	NA	NA	NA	91055162	91054985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91055000_91055200
ES.19533.19	chr2	-	155	1	Intergenic	novelGene_16194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAAAAGTT	9173	False	NA	NA	False	NA	NA	NA	91061151	91060996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91061000_91061200
ES.19533.2	chr2	-	2215	8	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	-1	26	intron_retention	FALSE	canonical	3	12	junction_6	30.9970373831212	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGACCTGGTAAGAGT	3018	False	NA	0	True	ACTAAA	-36	NA	91067306	91041890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91064452_91065297_91067034
ES.19533.20	chr2	-	1452	1	NIC	ENSMUSG00000002109.15	novel	1698	5	NA	NA	1	-23599	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3073	False	NA	NA	False	NA	NA	NA	91067251	91065799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91065800_91067300
ES.19533.4	chr2	-	2138	8	NNC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	16	-7	intron_retention	FALSE	canonical	2	3	junction_5	40.8111629386883	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	3035	False	NA	-33	True	AATAAA	-28	NA	91067289	91041923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047549_91047651_91047752_91064452_91065297_91067034
ES.19533.5	chr2	-	4158	4	NNC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	17897	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	51.6161042914149	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAGCCCAACAGGGTT	NA	False	NA	-33	True	AATAAA	-28	NA	91047779	91041923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91043457_91044763
ES.19533.6	chr2	-	1807	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	23	-273	1	5	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCAAAAGCCCAACAG	3020	False	NA	-37	True	AATAAA	-24	NA	91067304	91041927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ES.19533.7	chr2	-	1975	7	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	5	4	intron_retention	FALSE	canonical	1	4	junction_3	44.2555708985384	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCAAAAGCCCAACA	3077	False	NA	-38	True	AATAAA	-23	NA	91067247	91041928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047397_91047576_91047651_91047752_91064452_91065297_91067034
ES.19533.8	chr2	-	4135	5	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	14708	4	intron_retention	FALSE	canonical	1	4	junction_3	43.808532273976	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCAAAAGCCCAACA	NA	False	NA	-38	True	AATAAA	-23	NA	91050968	91041928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047397_91047576_91047651
ES.19533.9	chr2	-	2256	9	NNC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	-11	4	intron_retention	FALSE	canonical	0	0	junction_4	32.8859297420645	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCAAAAGCCCAACA	3008	False	NA	-38	True	AATAAA	-23	NA	91067316	91041928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047077_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ES.19534.1	chr2	+	590	2	Intergenic	novelGene_16196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	91067483	91068393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91067747_91068066
ES.19534.2	chr2	+	161	1	Intergenic	novelGene_16197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	91067832	91067993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91067800_91068000
ES.19535.1	chr2	-	172	1	Intergenic	novelGene_16198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	91070767	91070595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91070600_91070800
ES.19536.1	chr2	+	1860	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4752	False	NA	19	True	AATAAA	-16	NA	91087159	91095023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.10	chr2	+	1835	12	NNC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	24	46128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	27.6046468719602	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAAACTTGAGGGGGCT	4799	False	NA	NA	False	NA	NA	NA	91087206	91141152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535_91095010_91141116
ES.19536.11	chr2	+	3416	16	NNC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	-182	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.9538102279935	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	5320	False	NA	NA	False	AATAAA	-24	NA	91095136	91107275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095750_91095916_91096036_91096403_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.12	chr2	+	2946	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	132	-10	132	10	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGCCTCCCTGCCCAG	5634	False	NA	NA	False	AATAAA	-35	NA	91095450	91107286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.13	chr2	+	6091	15	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	-93	-2	intron_retention	FALSE	canonical	3	212	junction_10	15.3212204448068	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCCTCTCCGTCCTGC	5728	False	NA	NA	False	AATAAA	-23	NA	91095544	91107274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.15	chr2	+	2828	16	NNC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	-75	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.3618116763421	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGGTCAGTGTCCT	5746	False	NA	NA	False	AATAAA	-12	NA	91095562	91107263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095767_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.16	chr2	+	2901	15	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	-67	-3	intron_retention	FALSE	canonical	3	197	junction_9	19.8341336373147	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCCTCTCCGTCCTG	5754	False	NA	NA	False	AATAAA	-22	NA	91095570	91107273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.17	chr2	+	2903	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	297	-132	-22	132	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCAAAGGCCCCTGGC	5799	False	NA	NA	False	NA	NA	NA	91095615	91107408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.18	chr2	+	3702	15	NIC	ENSMUSG00000027255.15	novel	2791	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	197	junction_9	19.7753970005816	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5811	False	NA	NA	False	AATAAA	-25	NA	91095627	91107276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.19	chr2	+	840	7	NNC	ENSMUSG00000027255.15	novel	2791	17	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.5551080414128	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGTCCTCTCCGTCCT	5821	False	NA	NA	False	AATAAA	-21	NA	91095637	91107272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91107031
ES.19536.2	chr2	+	2466	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	29	junction_1	21.2207678384718	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4757	False	NA	20	True	AATAAA	-17	NA	91087164	91095024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.20	chr2	+	7572	11	NIC	ENSMUSG00000027255.15	novel	2791	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	212	junction_8	17.6906755099968	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCCTCTCCGTCCTGC	5821	False	NA	NA	False	AATAAA	-23	NA	91095637	91107274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91104015_91104097_91105512_91105620_91105740_91106109
ES.19536.22	chr2	+	3803	14	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	197	junction_10	20.469344953863	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	5824	False	NA	NA	False	AATAAA	-24	NA	91095640	91107275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91105512_91105620_91105740_91106109
ES.19536.23	chr2	+	3006	16	NNC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	82.8788674311291	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5832	False	NA	NA	False	AATAAA	-25	NA	91095648	91107276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095750_91095916_91096036_91096294_91096644_91097469_91097594_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.24	chr2	+	2976	14	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	11	-1	intron_retention	FALSE	canonical	3	197	junction_9	20.469344953863	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	5832	False	NA	NA	False	AATAAA	-24	NA	91095648	91107275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100635_91103885_91104015_91104097_91104233_91105139_91105512_91105620_91105740_91106109
ES.19536.25	chr2	+	3643	15	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	13	0	intron_retention	FALSE	canonical	3	197	junction_10	19.8341336373147	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5834	False	NA	NA	False	AATAAA	-25	NA	91095650	91107276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.26	chr2	+	6493	13	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	15	-3	intron_retention	FALSE	canonical	3	234	junction_6	13.0923535784145	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCCTCTCCGTCCTG	5836	False	NA	NA	False	AATAAA	-22	NA	91095652	91107273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91100415_91100502_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.27	chr2	+	2905	16	NNC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	63.0711767238676	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	5843	False	NA	NA	False	AATAAA	-24	NA	91095659	91107275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103706_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.28	chr2	+	1795	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	350	923	0	-923	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGTTCTTCTCCAGTCT	5852	False	NA	NA	False	NA	NA	NA	91095668	91106353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.29	chr2	+	2918	15	NNC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	4	-1	intron_retention	FALSE	canonical	1	1	junction_4	64.7008816140294	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	5856	False	NA	NA	False	AATAAA	-24	NA	91095672	91107275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097594_91097680_91097762_91098501_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ES.19536.3	chr2	+	1775	10	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCGTCTTTTGATAG	4772	False	NA	18	True	AATAAA	-15	NA	91087179	91095022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.30	chr2	+	4519	10	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	24	-3	intron_retention	FALSE	canonical	3	197	junction_8	23.4557634603134	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCCTCTCCGTCCTG	5886	False	NA	NA	False	AATAAA	-22	NA	91095702	91107273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098854_91099796_91099850_91100277_91100635_91103885_91104015_91104097
ES.19536.31	chr2	+	4476	2	Antisense	novelGene_ENSMUSG00000040591.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAGAAAGAAGTCAAGT	9014	False	NA	NA	False	NA	NA	NA	91111531	91116078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_91112297_91112367
ES.19536.32	chr2	+	97	1	Intergenic	novelGene_16199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAGAAAAGAA	7752	False	NA	NA	False	NA	NA	NA	91127637	91127734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91127600_91127700
ES.19536.5	chr2	+	1880	9	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	32	junction_1	18.5926732881531	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGTGTTGTGAGCGTCT	4774	False	NA	10	True	AATAAA	-7	NA	91087181	91095014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.6	chr2	+	5620	8	NIC	ENSMUSG00000027257.14	novel	1993	11	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	62	junction_3	11.6584032932018	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTGTGAGCGTCTT	4774	False	NA	11	True	AATAAA	-8	NA	91087181	91095015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91090607_91090748_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.7	chr2	+	1656	9	NIC	ENSMUSG00000027257.14	novel	1862	11	NA	NA	2	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.0242640402919	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAATAAAAACCCCATCAA	4777	False	NA	-5	True	ATTAAA	-8	NA	91087184	91094999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91087272_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19536.8	chr2	+	4984	9	ISM	ENSMUSG00000027257.14	ENSMUST00000059566.11	1867	10	685	25	9	-24	3prime_fragment	FALSE	canonical	3	62	junction_4	11.2798215854685	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAATAAAAACCCCATCAA	4784	False	NA	-5	True	ATTAAA	-8	NA	91087191	91094999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ES.19537.1	chr2	+	181	1	Intergenic	novelGene_16204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAAGCTCAATTCAG	NA	False	NA	NA	False	NA	NA	NA	91252880	91253061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91252900_91253100
ES.19538.1	chr2	-	1622	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-60	415	2	-1	multi-exon	TRUE	canonical	3	72	junction_5	19.7673974007708	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGAGTCTAAAGCCA	NA	False	NA	-8	True	AATAAA	-17	NA	91275047	91108589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ES.19538.2	chr2	-	1701	10	NNC	ENSMUSG00000040591.19	novel	1977	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.733228459335	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGAGTCTAAAGCCA	NA	False	NA	-8	True	AATAAA	-17	NA	91275047	91108589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91170302_91170382_91214073_91214205_91252210_91252314_91274913
ES.19538.3	chr2	-	179	1	Intergenic	novelGene_16200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCCAAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	91128026	91127847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91127800_91128000
ES.19538.4	chr2	-	1760	1	Intergenic	novelGene_16201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91131048	91129288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91129300_91131000
ES.19538.5	chr2	-	1925	5	NNC	ENSMUSG00000040591.19	novel	732	4	NA	NA	-3	1991	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	49.8416241709678	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTGCAGTGTAATATA	NA	False	NA	NA	False	AATGAA	-16	NA	91274991	91132764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91134293_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ES.19538.6	chr2	-	544	4	NNC	ENSMUSG00000040591.19	novel	418	4	NA	NA	1	29300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.3266662856707	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTATCATGTTCTTC	NA	False	NA	NA	False	TATAAA	-39	NA	91275013	91184828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91185039_91214073_91214205_91252210_91252314_91274913
ES.19538.7	chr2	-	3059	1	Intergenic	novelGene_16202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGACGGAGTCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	91203336	91200277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91200300_91203300
ES.19538.8	chr2	-	296	1	Intergenic	novelGene_16203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACTTTAATATTCATG	6277	False	NA	NA	False	NA	NA	NA	91249763	91249467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91249500_91249800
ES.19539.1	chr2	+	8128	38	NNC	ENSMUSG00000027253.16	novel	7926	38	NA	NA	-97	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	9.89993765244403	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTTGGCTGGCTTGG	NA	False	NA	1	True	TATAAA	-13	NA	91287758	91344241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854_91309012_91310657_91310876_91311037_91311215_91312202_91312326_91316129_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328813_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ES.19539.10	chr2	+	4072	12	NNC	ENSMUSG00000027253.16	novel	7926	38	NA	NA	17895	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.28903242036621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTGGCTTGGAGTC	NA	False	NA	5	True	TATAAA	-17	NA	91324558	91344245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331909_91332217_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ES.19539.2	chr2	+	2606	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-96	34490	-96	2	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGAACTGCCTAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	91287759	91309634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
ES.19539.3	chr2	+	4973	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	-89	-1618	-89	34	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACATCAAGTGAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	91287766	91311250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
ES.19539.4	chr2	+	3364	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	-87	-11	-87	11	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGTGTTTTTTTATT	NA	False	NA	NA	False	AATAAA	-25	NA	91287768	91309643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
ES.19539.5	chr2	+	8115	38	FSM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	-67	-122	-67	122	multi-exon	FALSE	canonical	0	0	junction_23	9.67152258747147	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTGGCTTGGAGTCA	NA	False	NA	6	True	TATAAA	-18	NA	91287788	91344246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854_91309012_91310657_91310876_91311037_91311215_91312202_91312326_91316098_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ES.19539.7	chr2	+	8165	32	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	17257	-1167	-1488	1167	3prime_fragment	FALSE	canonical	0	0	junction_17	8.22245345957648	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAGAATAAGATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91305112	91345291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854_91309012_91310657_91310876_91311037_91311215_91312202_91312326_91316098_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ES.19539.8	chr2	+	3569	22	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	28406	1789	9598	-1789	3prime_fragment	FALSE	canonical	0	0	junction_7	2.49716392421465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCTCTTGCACTCTAT	3259	False	NA	NA	False	NA	NA	NA	91316261	91342335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ES.1954.1	chr1	+	162	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	174234929	174235091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_174234900_174235100
ES.19540.1	chr2	-	185	1	Intergenic	novelGene_16205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAGACAGA	NA	False	NA	NA	False	NA	NA	NA	91315096	91314911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91314900_91315100
ES.19541.1	chr2	-	1460	1	Antisense	novelGene_ENSMUSG00000027253.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATTTATTATGT	9510	False	NA	NA	False	NA	NA	NA	91319362	91317902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91317900_91319400
ES.19542.1	chr2	+	6921	45	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	-15	15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	163.267151339795	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357091	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393295_91393459_91394664_91394794_91395965_91396149_91397012_91397241_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.101	chr2	+	183	1	Intergenic	novelGene_16209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	615	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGAGATGTGG	NA	False	NA	NA	False	NA	NA	NA	91399779	91399962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91399800_91400000
ES.19542.103	chr2	+	4403	27	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	26648	-17	17730	15	3prime_fragment	FALSE	canonical	3	522	junction_1	58.3643549522659	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91403314	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.104	chr2	+	4313	26	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	29686	-17	-18757	15	3prime_fragment	FALSE	canonical	3	542	junction_8	55.3407770093626	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91406352	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.105	chr2	+	4228	26	ISM	ENSMUSG00000040549.17	ENSMUST00000046769.16	6511	43	29693	-2	-18750	0	3prime_fragment	FALSE	canonical	3	35	junction_24	127.658268827366	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91406359	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ES.19542.106	chr2	+	4139	25	NNC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	-18524	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.410219596997	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCATTTCCCAAAATGC	NA	False	NA	9	True	AATAAA	-14	NA	91406585	91451007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411467_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.107	chr2	+	5184	24	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	31339	-1177	-17104	1175	3prime_fragment	FALSE	canonical	3	542	junction_6	54.9452038428361	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAACCCAAGCTACTA	NA	False	NA	NA	False	NA	NA	NA	91408005	91452184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.108	chr2	+	3969	23	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	31709	-1	-16734	0	3prime_fragment	FALSE	canonical	3	542	junction_5	54.4055782263984	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91408375	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.109	chr2	+	2835	2	NNC	ENSMUSG00000040549.17	novel	6384	42	NA	NA	-13883	-15706	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTAGGGTATCATTAC	NA	False	NA	NA	False	NA	NA	NA	91411226	91415332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91413898_91415168
ES.19542.11	chr2	+	7873	2	NNC	ENSMUSG00000040549.17	novel	696	5	NA	NA	16	-20611	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAACCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91357122	91365098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91363711_91363813
ES.19542.110	chr2	+	173	1	Intergenic	novelGene_16210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATTATATACAGT	NA	False	NA	NA	False	NA	NA	NA	91425431	91425604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91425400_91425600
ES.19542.13	chr2	+	6472	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_33	109.559903472847	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCATTTCCCAAAATG	NA	False	NA	8	True	AATAAA	-13	NA	91357122	91451006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.15	chr2	+	875	3	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	22	-12972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGTTTCTAAATGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	91357128	91372737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357200_91364453_91364620_91372099
ES.19542.17	chr2	+	6530	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	30	9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_22	109.98459230373	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGCTCTGGGAGTTC	NA	False	NA	20	True	AATAAA	-25	NA	91357136	91451018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.2	chr2	+	6697	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	-15	-17	-15	17	multi-exon	FALSE	canonical	3	508	junction_5	59.4884084586321	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTTCTGGGCAAC	NA	False	NA	28	True	AATAAA	-33	NA	91357091	91451026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.20	chr2	+	6474	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	108.38625865745	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357136	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91450032_91450185_91450326
ES.19542.23	chr2	+	6693	45	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	137.983380242479	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357137	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91448475_91448534_91450032_91450185_91450326
ES.19542.25	chr2	+	6636	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	109.20932213462	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTCTGGGAGTTCTG	NA	False	NA	22	True	AATAAA	-27	NA	91357137	91451020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409776_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.28	chr2	+	6376	42	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	111.099609094666	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCATTTCCCAAAATG	NA	False	NA	8	True	AATAAA	-13	NA	91357137	91451006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.29	chr2	+	6615	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	107.954891126423	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357137	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431453_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.3	chr2	+	6655	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	140.007722107978	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357103	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387923_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437798_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.31	chr2	+	8002	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	-3	intron_retention	FALSE	canonical	3	508	junction_5	59.3126540436795	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATACCCATTTCCCAAAA	NA	False	NA	6	True	AATAAA	-11	NA	91357137	91451004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.33	chr2	+	6541	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	140.872572439653	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357137	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408463_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419015_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.36	chr2	+	9573	32	ISM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	33	18850	33	1121	intron_retention	FALSE	canonical	3	508	junction_5	50.4717804753274	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-29	NA	91357139	91432159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706
ES.19542.38	chr2	+	6657	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	109.052877157024	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357139	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91418988_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.39	chr2	+	8216	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	0	intron_retention	FALSE	canonical	3	508	junction_4	59.822550333003	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357139	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.40	chr2	+	6385	43	NNC	ENSMUSG00000040549.17	novel	6511	43	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	162.818160539175	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCATTTCCCAAAATG	NA	False	NA	8	True	AATAAA	-13	NA	91357139	91451006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387917_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ES.19542.41	chr2	+	8083	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	33	-1451	33	1451	multi-exon	FALSE	canonical	3	508	junction_5	59.4884084586321	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCAAGATGCTCCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	91357139	91452460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.43	chr2	+	5466	35	ISM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	33	18854	33	1117	5prime_fragment	FALSE	canonical	3	508	junction_5	50.470939598393	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-25	NA	91357139	91432155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350
ES.19542.44	chr2	+	7662	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	11	intron_retention	FALSE	canonical	3	508	junction_5	58.93710856871	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTCTGGGAGTTCTG	NA	False	NA	22	True	AATAAA	-27	NA	91357139	91451020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.45	chr2	+	6513	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	33	119	33	-117	multi-exon	FALSE	canonical	3	508	junction_5	59.4884084586321	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTGAGTTGTGAGCTC	NA	False	NA	101	True	NA	NA	NA	91357139	91450890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.46	chr2	+	6479	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_42	107.61938474452	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357139	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450326
ES.19542.47	chr2	+	6656	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	108.773197236235	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357139	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416041_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.48	chr2	+	6368	43	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	110.64561362322	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357139	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394773_91398540_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.5	chr2	+	6507	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	107.555195434251	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357110	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445352_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.53	chr2	+	6508	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	109.309826561026	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357140	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408501_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.54	chr2	+	6622	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.264545672644	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357140	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376750_91379116_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.56	chr2	+	6653	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	109.090750200648	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357140	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393270_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.57	chr2	+	6662	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	109.343544924507	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357140	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393261_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.59	chr2	+	2961	8	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	238.555688103492	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357140	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376746_91443896_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.6	chr2	+	6822	45	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	164.443545790238	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357117	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387918_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91418647_91418816_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.60	chr2	+	6639	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	164.488814324435	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357140	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386980_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411588_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422145_91425032_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.61	chr2	+	6496	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	34	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	108.606030409319	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357140	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.63	chr2	+	6671	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	108.820218311979	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357141	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450284
ES.19542.64	chr2	+	6618	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	109.052877157024	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357141	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419025_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.67	chr2	+	6556	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.712769249729	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357142	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402764_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.68	chr2	+	3667	28	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	36	-11134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	117.194584536653	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTTGTGTATGGGTG	NA	False	NA	NA	False	NA	NA	NA	91357142	91419904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91419738
ES.19542.69	chr2	+	6418	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	42	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	139.322920401741	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357148	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445431_91445503_91445688_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.7	chr2	+	6605	44	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	12	15	combination_of_known_junctions	FALSE	canonical	3	35	junction_42	103.024526214016	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357118	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ES.19542.71	chr2	+	5679	34	ISM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	43	18822	43	1149	intron_retention	FALSE	canonical	3	508	junction_5	50.4651276553876	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTACTGCAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	91357149	91432187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985
ES.19542.72	chr2	+	3567	28	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	44	-11183	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	116.843968742721	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	91357150	91419855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91419781
ES.19542.73	chr2	+	6702	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	52	0	intron_retention	FALSE	canonical	3	508	junction_5	59.6492962972141	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357158	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.74	chr2	+	6483	43	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	109.95918898678	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATTTCCCAAAATGCT	NA	False	NA	10	True	AATAAA	-15	NA	91357158	91451008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.77	chr2	+	6731	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	78	15	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	107.246555601941	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357184	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357325_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.78	chr2	+	6709	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	82	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	162.834665158845	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357188	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357325_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409773_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446808_91450032_91450185_91450326
ES.19542.79	chr2	+	6812	44	NIC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	87	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	107.120843292069	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCAAAATGCTCTGGG	NA	False	NA	15	True	AATAAA	-20	NA	91357193	91451013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91357426_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.80	chr2	+	6700	44	NNC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	89	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	139.844497584271	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACCCATTTCCCAAAAT	NA	False	NA	7	True	AATAAA	-12	NA	91357195	91451005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357325_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406425_91406514_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.82	chr2	+	7523	45	NNC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.707161266311	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91357324	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357426_91359090_91359922_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.83	chr2	+	6610	44	NNC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	111	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	108.760060114185	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357433	91451009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357468_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.84	chr2	+	5652	2	Intergenic	novelGene_16206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91359305	91365062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91363707_91363811
ES.19542.86	chr2	+	4410	2	Intergenic	novelGene_16207	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAACCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91360583	91365098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91363709_91363813
ES.19542.87	chr2	+	1625	2	Intergenic	novelGene_16208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAACCAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91363362	91365098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91363707_91363817
ES.19542.88	chr2	+	6593	43	FSM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	-2	-17	0	15	multi-exon	FALSE	canonical	3	508	junction_4	59.822550333003	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91376664	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.9	chr2	+	6574	44	NNC	ENSMUSG00000040549.17	novel	6665	44	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	109.049197247055	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91357120	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446723_91446806_91450032_91450185_91450326
ES.19542.90	chr2	+	6338	41	NIC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	0	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	112.404334324794	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91376664	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.91	chr2	+	6516	43	FSM	ENSMUSG00000040549.17	ENSMUST00000046769.16	6511	43	-2	-3	0	1	multi-exon	FALSE	canonical	3	35	junction_41	104.161003927713	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTCCCAAAATGCTCT	NA	False	NA	12	True	AATAAA	-17	NA	91376664	91451010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ES.19542.92	chr2	+	6139	43	FSM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	-2	437	0	-437	multi-exon	FALSE	canonical	3	508	junction_4	59.822550333003	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCACCCTCGGCACTC	NA	False	NA	NA	False	AATAAA	-18	NA	91376664	91450570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19542.94	chr2	+	4203	26	ISM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	-2	31152	0	-11183	5prime_fragment	FALSE	canonical	3	508	junction_4	45.1769852911856	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	91376664	91419855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013
ES.19542.97	chr2	+	7612	42	NIC	ENSMUSG00000040549.17	novel	6574	43	NA	NA	0	15	intron_retention	FALSE	canonical	3	508	junction_4	59.3017169628437	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGGAGTTCTGGGCA	NA	False	NA	26	True	AATAAA	-31	NA	91376664	91451024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ES.19543.1	chr2	-	2222	1	Antisense	novelGene_ENSMUSG00000040549.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAATCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	91398094	91395872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91395900_91398100
ES.19544.1	chr2	-	1861	13	NNC	ENSMUSG00000027249.16	novel	1988	14	NA	NA	522	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.15522927607385	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAGTGTGCCCAATGC	NA	False	NA	NA	False	AATAAA	-15	NA	91466218	91455664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466084
ES.19544.2	chr2	-	2002	12	NNC	ENSMUSG00000027249.16	novel	1988	14	NA	NA	355	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.3843974163494	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCAGTGTGCCCAATG	NA	False	NA	NA	False	AATAAA	-14	NA	91466385	91455665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91466084
ES.19544.3	chr2	-	2005	13	ISM	ENSMUSG00000027249.16	ENSMUST00000028681.15	1988	14	358	1	339	-1	3prime_fragment	FALSE	canonical	2	10	junction_12	3.05845821725043	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCAGTGTGCCCAATG	NA	False	NA	NA	False	AATAAA	-14	NA	91466401	91455665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463320_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122
ES.19545.1	chr2	+	127	1	Intergenic	novelGene_16211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAACTTTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	91468327	91468454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91468300_91468500
ES.19546.1	chr2	+	3262	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	-397	1	-35	-1	multi-exon	TRUE	canonical	3	46	junction_2	93.668116113923	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480169	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.11	chr2	+	2904	14	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	119.417570788464	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480545	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484387_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.13	chr2	+	2828	13	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	101.76562806545	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480546	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91484387_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.14	chr2	+	3019	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	121.546833167554	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480556	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.15	chr2	+	1606	13	NIC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-10	69	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.692980832275	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTCTCACTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	91480556	91501461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91480598_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.16	chr2	+	3140	14	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	15	junction_1	120.767711896377	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480556	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.17	chr2	+	2792	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	119.756811403573	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAACCCATTTGGCT	NA	False	NA	NA	False	AATAAA	-9	NA	91480562	91502661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056_91501822_91501877
ES.19546.19	chr2	+	1750	14	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	-3	145	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	115.844059639872	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTCCCTGGCGA	NA	False	NA	NA	False	AGTAAA	-14	NA	91480563	91501537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.2	chr2	+	2994	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	206	1	-52	-1	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480410	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.20	chr2	+	1574	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	103	1206	-1	73	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCACTGCCTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	91480565	91501465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.22	chr2	+	3023	15	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	138.703931495271	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480568	91502671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484387_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.23	chr2	+	3856	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	2	1004	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTTTGTTCTGATTCT	NA	False	NA	NA	False	NA	NA	NA	91480568	91503675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.25	chr2	+	2849	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	103.332461662036	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480572	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499979_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.26	chr2	+	6630	4	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	369	11480	7	6313	5prime_fragment	FALSE	canonical	3	195	junction_1	87.2251238017019	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACAATGGATGTCTGT	NA	False	NA	NA	False	NA	NA	NA	91480573	91491191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780
ES.19546.27	chr2	+	1621	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	372	1208	10	71	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTCACTGCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	91480576	91501463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.28	chr2	+	1794	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	73	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	121.546833167554	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCACTGCCTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	91480576	91501465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.29	chr2	+	3029	15	NNC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	141.241795860713	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480576	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484387_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.3	chr2	+	2812	13	NIC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	107.312239128008	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480463	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500810_91500915_91501056
ES.19546.30	chr2	+	3832	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	372	-1003	10	1003	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTTTGTTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	91480576	91503674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.32	chr2	+	3988	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	1003	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	118.35093526268	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTTTGTTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	91480576	91503674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.33	chr2	+	1718	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	153	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTGGCGAGTGTAGAA	NA	False	NA	NA	False	AGTAAA	-22	NA	91480576	91501545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.34	chr2	+	3093	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	10	-1	intron_retention	FALSE	canonical	3	15	junction_1	94.2405960339195	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480576	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.37	chr2	+	3424	12	NIC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	13	-8	intron_retention	FALSE	canonical	3	195	junction_1	53.7559529665212	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	91480579	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91500620_91500810_91500915_91501056
ES.19546.39	chr2	+	4234	14	NIC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	24	-10	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	117.278457895687	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAACCCATTTGGCT	NA	False	NA	NA	False	AATAAA	-9	NA	91480590	91502661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91482000_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.4	chr2	+	3137	16	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	156.679205172012	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480468	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91485706_91485737_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.40	chr2	+	4230	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	94.2405960339195	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480591	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.41	chr2	+	4204	14	NIC	ENSMUSG00000027247.17	novel	1479	7	NA	NA	36	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	89.3866675257611	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480602	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.42	chr2	+	4290	13	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	414	8	52	-8	3prime_fragment	FALSE	canonical	3	316	junction_1	27.1625763791941	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	91480618	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.44	chr2	+	3257	11	NIC	ENSMUSG00000027247.17	novel	3068	13	NA	NA	764	-8	intron_retention	FALSE	canonical	3	319	junction_2	26.2238441118002	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	91484316	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500620_91500810_91500915_91501056
ES.19546.46	chr2	+	218	1	Intergenic	novelGene_16212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAATAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	91496203	91496421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91496200_91496400
ES.19546.47	chr2	+	2293	8	NIC	ENSMUSG00000027247.17	novel	2883	13	NA	NA	-320	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	124.576670925079	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	215	False	NA	NA	False	AATAAA	-11	NA	91498540	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500810_91500915_91501056
ES.19546.48	chr2	+	1889	5	NNC	ENSMUSG00000027247.17	novel	2883	13	NA	NA	268	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	154	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	803	False	NA	NA	False	AATAAA	-11	NA	91499128	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91499173_91499530_91499577_91500531_91500620_91500810_91500915_91501056
ES.19546.49	chr2	+	1651	1	NIC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	737	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCCATTTGGCTGT	2687	False	NA	NA	False	AATAAA	-11	NA	91501012	91502663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91501000_91502700
ES.19546.50	chr2	+	5182	1	Antisense	novelGene_ENSMUSG00000027244.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGCACTAATACTTCCC	4736	False	NA	NA	False	NA	NA	NA	91503061	91508243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_91503100_91508200
ES.19546.6	chr2	+	2870	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	12	1	12	-1	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480474	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.7	chr2	+	2914	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTTTAGGAAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	91480508	91502673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.8	chr2	+	3045	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-51	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	118.35093526268	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTTGGCTGTTTAGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	91480515	91502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ES.19546.9	chr2	+	2975	16	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	-49	26048	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	125.382543530677	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATACAGCTACAAAGA	NA	False	NA	NA	False	NA	NA	NA	91480517	91528719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056_91502671_91517672_91517726_91528684
ES.19547.1	chr2	+	2141	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3333	False	NA	NA	False	NA	NA	NA	91541157	91551890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541321_91542424_91543211_91550698
ES.19547.10	chr2	+	2357	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-49	0	20	0	multi-exon	FALSE	canonical	3	50	junction_1	26	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3393	False	NA	NA	False	NA	NA	NA	91541217	91551890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541597_91542424_91543211_91550698
ES.19547.11	chr2	+	3810	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	20	18	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	12.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTCTGGACTGCTCTTG	3393	False	NA	NA	False	NA	NA	NA	91541217	91551908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541321_91542424_91543211_91548987
ES.19547.12	chr2	+	4066	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3395	False	NA	NA	False	NA	NA	NA	91541219	91551890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541597_91542424_91543211_91548987
ES.19547.13	chr2	+	1825	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-46	529	23	-529	multi-exon	FALSE	canonical	3	50	junction_1	26	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGAGTTTTGTTGTTTCA	3396	False	NA	NA	False	AAGAAA	-36	NA	91541220	91551361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541597_91542424_91543211_91550698
ES.19547.14	chr2	+	3558	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-46	-1204	23	1204	multi-exon	FALSE	canonical	3	50	junction_1	26	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTGTGAGCTTTCAT	3396	False	NA	NA	False	NA	NA	NA	91541220	91553094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541597_91542424_91543211_91550698
ES.19547.15	chr2	+	2079	3	NNC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	23	15	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	48.5	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTACTTCTGGACTGCTC	3396	False	NA	NA	False	NA	NA	NA	91541220	91551905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91541307_91542424_91543211_91550698
ES.19547.16	chr2	+	3188	2	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	-32	15	intron_retention	FALSE	canonical	3	102	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTACTTCTGGACTGCTC	3405	False	NA	NA	False	NA	NA	NA	91541229	91551905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91543211_91550698
ES.19547.17	chr2	+	3301	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	-32	-755	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCACTGGGCAGATCAG	3405	False	NA	NA	False	AATAAA	-19	NA	91541229	91551135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541597_91542424_91543211_91548987
ES.19547.18	chr2	+	3429	2	FSM	ENSMUSG00000027243.9	ENSMUST00000128140.2	372	2	41	-3098	-24	-5	multi-exon	FALSE	canonical	3	33	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAAGTCCAAGATTATC	3413	False	NA	NA	False	AATAAA	-18	NA	91541237	91545770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541321_91542424
ES.19547.19	chr2	+	1587	3	NIC	ENSMUSG00000027243.9	novel	1316	2	NA	NA	-2	10	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	9.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAATAAAAAGACCAAGA	3440	False	NA	NA	False	AAGAAA	-5	NA	91541264	91549642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541411_91542424_91543211_91548987
ES.19547.2	chr2	+	2837	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-75	-454	-5	454	multi-exon	FALSE	canonical	3	50	junction_1	26	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTATACTTTACAG	3367	False	NA	NA	False	AATAAA	-22	NA	91541191	91552344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541597_91542424_91543211_91550698
ES.19547.20	chr2	+	6064	20	Fusion	ENSMUSG00000027243.9_ENSMUSG00000040506.17	novel	4690	17	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	39.7523497101646	331	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	3448	False	NA	7	True	ATTAAA	-19	NA	91541272	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_91541411_91542424_91543211_91556098_91556191_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.21	chr2	+	2060	1	Intergenic	novelGene_16213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACCTGCTTTTGGCTTT	6132	False	NA	NA	False	NA	NA	NA	91552449	91554509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91552400_91554500
ES.19547.22	chr2	+	5298	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	-94	-1	-3	1	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCTGCTTATTTCTG	NA	False	NA	8	True	ATTAAA	-20	NA	91560475	91749195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.23	chr2	+	5007	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	14	0	10	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560492	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.24	chr2	+	5023	19	NNC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.1262939884466	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560494	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654786_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.25	chr2	+	5216	17	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_2	30.4774506807902	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGGCTCCTGCTTATT	NA	False	NA	4	True	ATTAAA	-16	NA	91560494	91749191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.26	chr2	+	5118	19	NNC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	28.6617674538792	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560495	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602897_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.27	chr2	+	4915	18	FSM	ENSMUSG00000040506.17	ENSMUST00000111317.9	4929	18	14	0	14	0	multi-exon	TRUE	canonical	3	16	junction_8	30.449799858434	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560496	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.28	chr2	+	5188	17	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	15	0	intron_retention	FALSE	canonical	3	16	junction_7	27.2367370246511	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560497	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.29	chr2	+	4544	15	NIC	ENSMUSG00000040506.17	novel	4929	18	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	35.4973410904225	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560505	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.3	chr2	+	2648	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	-2	454	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTATACTTTACAG	3370	False	NA	NA	False	AATAAA	-22	NA	91541194	91552344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541411_91542424_91543211_91550698
ES.19547.30	chr2	+	6298	17	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	82	junction_5	14.9089685676106	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560508	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.31	chr2	+	4908	18	NNC	ENSMUSG00000040506.17	novel	4929	18	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	38.0874063048554	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGGCTCCTGCTTATT	NA	False	NA	4	True	ATTAAA	-16	NA	91560508	91749191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730835_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.32	chr2	+	5268	18	NNC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_2	29.6805366537629	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560512	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597055_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.33	chr2	+	2864	10	NNC	ENSMUSG00000040506.17	novel	5063	17	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.623518422527	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560512	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716201_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.34	chr2	+	4969	19	NNC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	30.9300285590988	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCCTGCTTATTT	NA	False	NA	5	True	ATTAAA	-17	NA	91560522	91749192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741764_91741953_91747671
ES.19547.35	chr2	+	4882	18	NIC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	31.2936753617573	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560524	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91741758_91741953_91747671
ES.19547.36	chr2	+	5277	19	NNC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	36.738649880769	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560524	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91704842_91704873_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.38	chr2	+	4211	9	NNC	ENSMUSG00000040506.17	novel	3419	9	NA	NA	1	-14467	intron_retention	FALSE	non_canonical	0	0	junction_5	50.101771425769	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCATTTGTTTTTAAGA	NA	False	NA	NA	False	AATAAA	-14	NA	91560527	91626847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599428_91601255_91601323_91602635_91604093_91624812_91625987_91626196
ES.19547.39	chr2	+	5122	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	-42	123	1	-122	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTTCCTTTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	91560527	91749071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.4	chr2	+	2879	2	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	-326	intron_retention	FALSE	canonical	3	102	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTGGTGCCCTGAG	3373	False	NA	NA	False	NA	NA	NA	91541197	91551564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91543211_91550698
ES.19547.41	chr2	+	5136	17	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_10	29.9545880250422	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91560534	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.42	chr2	+	5047	17	FSM	ENSMUSG00000040506.17	ENSMUST00000111316.9	5063	17	12	4	12	-4	multi-exon	FALSE	canonical	0	0	junction_8	30.510180165807	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACCAGGCTCCTGCTTA	NA	False	NA	2	True	ATTAAA	-14	NA	91560540	91749189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.43	chr2	+	178	1	Intergenic	novelGene_16221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTTATTT	4972	False	NA	NA	False	NA	NA	NA	91591141	91591319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91591100_91591300
ES.19547.44	chr2	+	4635	17	NNC	ENSMUSG00000040506.17	novel	4690	17	NA	NA	165	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	37.1710047449622	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCAGGCTCCTGCTTAT	NA	False	NA	3	True	ATTAAA	-15	NA	91596954	91749190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602897_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.45	chr2	+	5445	15	NIC	ENSMUSG00000040506.17	novel	5021	19	NA	NA	1295	0	intron_retention	FALSE	canonical	3	41	junction_4	23.7775618804702	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	False	NA	6	True	ATTAAA	-18	NA	91598084	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.46	chr2	+	4354	14	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	1406	-126	intron_retention	FALSE	canonical	2	3	junction_12	31.5907633868026	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGATTTCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	91598195	91749067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91741758_91741953_91747671
ES.19547.47	chr2	+	716	1	Intergenic	novelGene_16223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTTTCTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	91600077	91600793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91600100_91600800
ES.19547.48	chr2	+	4518	10	NIC	ENSMUSG00000040506.17	novel	4690	17	NA	NA	-201	0	intron_retention	FALSE	canonical	3	16	junction_1	34.7694345689848	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91603375	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ES.19547.49	chr2	+	3098	13	NNC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	473	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	43.6373947689619	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91604049	91749194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91743592_91743794_91747671
ES.19547.5	chr2	+	2638	4	NNC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	1	1835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.6439938313104	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTCTTGTTCTAAAAT	3374	False	NA	NA	False	AATAAA	-10	NA	91541198	91553725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_91541597_91542424_91543211_91550698_91551761_91553333
ES.19547.50	chr2	+	7480	1	Intergenic	novelGene_16227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTGTACTCCCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	91615481	91622961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91615500_91623000
ES.19547.51	chr2	+	2761	10	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	-6646	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	37.2929675957648	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCCTGCTTATTT	NA	False	NA	5	True	ATTAAA	-17	NA	91635366	91749192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91741758_91741953_91747671
ES.19547.52	chr2	+	174	1	Intergenic	novelGene_16231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	91639389	91639563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91639400_91639600
ES.19547.53	chr2	+	175	1	Intergenic	novelGene_16235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTGTGTGTGTGC	7422	False	NA	NA	False	NA	NA	NA	91672015	91672190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91672000_91672200
ES.19547.54	chr2	+	5248	2	NIC	ENSMUSG00000040506.17	novel	5063	17	NA	NA	85241	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCAGGCTCCTGCTTAT	NA	False	NA	3	True	ATTAAA	-15	NA	91727253	91749190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91730983_91747671
ES.19547.55	chr2	+	3066	1	Intergenic	novelGene_16238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGGAAACACAAACACACA	4438	False	NA	NA	False	NA	NA	NA	91735373	91738439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91735400_91738400
ES.19547.56	chr2	+	6000	3	ISM	ENSMUSG00000040506.17	ENSMUST00000045699.8	4690	17	139661	1	94438	0	3prime_fragment	FALSE	canonical	3	136	junction_1	1	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	5515	False	NA	6	True	ATTAAA	-18	NA	91736450	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_91740735_91741758_91741953_91747671
ES.19547.57	chr2	+	4382	2	Genic_Genomic	ENSMUSG00000040506.17	novel	5021	19	NA	NA	94920	-7661	multi-exon	FALSE	non_canonical	0	0	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGG	5997	False	NA	NA	False	NA	NA	NA	91736932	91741532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_91738200_91738417
ES.19547.58	chr2	+	6228	2	NIC	ENSMUSG00000040506.17	novel	5063	17	NA	NA	95234	0	intron_retention	FALSE	canonical	3	138	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	6311	False	NA	6	True	ATTAAA	-18	NA	91737246	91749193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91741953_91747671
ES.19547.6	chr2	+	2576	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	-67	-201	2	201	multi-exon	FALSE	canonical	3	50	junction_1	26	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3375	False	NA	NA	False	NA	NA	NA	91541199	91552091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_91541597_91542424_91543211_91550698
ES.19547.7	chr2	+	1874	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	14	-213	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGCATGTGTGATGTAT	3387	False	NA	NA	False	AATGAA	-45	NA	91541211	91551677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541321_91542424_91543211_91550698
ES.19547.8	chr2	+	6191	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	20	2123	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	21	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATGGATTATTATCTG	3393	False	NA	NA	False	AATAAA	-31	NA	91541217	91554013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541597_91542424_91543211_91548987
ES.19547.9	chr2	+	2171	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3393	False	NA	NA	False	NA	NA	NA	91541217	91551890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_91541411_91542424_91543211_91550698
ES.19548.1	chr2	+	2818	2	Genic_Genomic	ENSMUSG00000040495.5	novel	1440	1	NA	NA	-5104	1147	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTATTTTATTCATT	NA	False	NA	NA	False	ATTAAA	-24	NA	91752489	91760180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_91752689_91757561
ES.19548.2	chr2	+	3356	3	Genic_Genomic	ENSMUSG00000040495.5	novel	1440	1	NA	NA	-5062	1141	multi-exon	FALSE	canonical	0	0	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAGTTTATTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	91752531	91760174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_91752689_91753040_91753627_91757561
ES.19549.1	chr2	+	154	1	Intergenic	novelGene_16239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	6829	False	NA	NA	False	NA	NA	NA	91786696	91786850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91786700_91786800
ES.1955.1	chr1	+	155	1	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	174275166	174275321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_174275200_174275300
ES.19550.1	chr2	+	745	1	Intergenic	novelGene_16240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91790708	91791453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91790700_91791500
ES.19551.1	chr2	-	3689	1	Genic_Genomic	ENSMUSG00000075040.10	novel	NA	NA	NA	NA	1787	909	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGAGTTGGTTCGCTCT	NA	False	NA	NA	False	NA	NA	NA	91476793	91473104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_91473100_91476800
ES.19551.10	chr2	-	4823	3	FSM	ENSMUSG00000075040.10	ENSMUST00000155045.2	667	3	-1547	-2609	-3	0	multi-exon	FALSE	canonical	3	16	junction_2	4.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480127	91474013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91476819_91477940_91478192_91478360
ES.19551.12	chr2	-	3460	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	9	0	9	0	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480115	91474013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
ES.19551.13	chr2	-	3554	6	NIC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	7.67854152818099	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480118	91474013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280_91479372_91479495_91479771_91480048
ES.19551.14	chr2	-	3615	6	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	8.45221864364618	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480136	91474032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280_91479372_91479495_91479771_91479986
ES.19551.15	chr2	-	4669	4	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	8	0	intron_retention	FALSE	canonical	2	7	junction_3	7.34846922834953	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480116	91474032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91479372_91479495
ES.19551.16	chr2	-	3489	5	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	9.17877987534291	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480101	91474032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91479986
ES.19551.17	chr2	-	3889	3	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	8	0	intron_retention	FALSE	canonical	3	9	junction_2	8	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480116	91474032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478423_91479495
ES.19551.18	chr2	-	3493	5	NNC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	-273	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.17877987534291	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	91480409	91474033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480289
ES.19551.19	chr2	-	1359	1	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	-1	-406	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACAGCACCATAGTGTA	NA	False	NA	NA	False	NA	NA	NA	91480125	91478766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91478800_91480100
ES.19551.2	chr2	-	3606	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	-1	-136	-1	136	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGTATAAAGAGAACTG	NA	False	NA	NA	False	AATAAA	-18	NA	91480125	91473877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
ES.19551.3	chr2	-	3651	5	NIC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	-3	136	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	9.17877987534291	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGTATAAAGAGAACTG	NA	False	NA	NA	False	AATAAA	-18	NA	91480108	91473877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91479986
ES.19551.4	chr2	-	4091	4	NIC	ENSMUSG00000075040.10	novel	3740	4	NA	NA	6	135	intron_retention	FALSE	canonical	3	10	junction_3	6.16441400296898	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGTATAAAGAGAACT	NA	False	NA	NA	False	AATAAA	-17	NA	91480118	91473878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280
ES.19551.5	chr2	-	3748	6	NNC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	-282	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.45221864364618	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGTATAAAGAGAACT	NA	False	NA	NA	False	AATAAA	-17	NA	91480418	91473878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479280_91479372_91479495_91479771_91480289
ES.19551.6	chr2	-	3482	5	NNC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	6	131	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	8.8423695919137	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGGTATAAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	91480118	91473882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479659_91480048
ES.19551.7	chr2	-	3442	5	NNC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.17877987534291	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480125	91474013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480076
ES.19551.9	chr2	-	3413	5	NNC	ENSMUSG00000075040.10	novel	3469	5	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	9.42072184070839	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480125	91474013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91476819_91477940_91478135_91478360_91478423_91479495_91479771_91480048
ES.19552.1	chr2	-	3526	16	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-164	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_15	65.7894283976452	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTATTCCAAATGTCT	NA	False	NA	0	True	AATAAA	-20	NA	91536243	91504962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535938
ES.19552.10	chr2	-	3381	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	70.9928136633331	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCCTATTCCAAATG	NA	False	NA	-3	True	AATAAA	-17	NA	91540891	91504965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.11	chr2	-	3610	17	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	79.205207175728	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGCTTCCTATTCCAAAT	NA	False	NA	-4	True	AATAAA	-16	NA	91540900	91504966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512455_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.13	chr2	-	3558	16	NIC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	92.5612349864792	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCTTCCTATTCCAAA	NA	False	NA	-5	True	AATAAA	-15	NA	91540900	91504967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.15	chr2	-	3872	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	-274	6	-217	-6	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATAGCTTCCTATTCCA	NA	False	NA	-7	True	AATAAA	-13	NA	91541138	91504969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.16	chr2	-	6146	14	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	9777	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	72.211802211953	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	164	False	NA	-8	True	AATAAA	-12	NA	91526302	91504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91515107_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262
ES.19552.17	chr2	-	3397	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-28	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	70.4016175602666	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	False	NA	-8	True	AATAAA	-12	NA	91540892	91504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.18	chr2	-	3488	17	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-37	-7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	92.9938674053295	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	False	NA	-8	True	AATAAA	-12	NA	91536116	91504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512455_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
ES.19552.19	chr2	-	7987	14	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-229	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	91.3361047103972	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	False	NA	-8	True	AATAAA	-12	NA	91541150	91504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91524154_91524210_91524351_91526262_91526345_91540591
ES.19552.2	chr2	-	3800	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	-250	1	-250	0	multi-exon	FALSE	canonical	3	217	junction_4	20.2170445141937	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	91541171	91504963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.20	chr2	-	3458	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-169	-7	combination_of_known_junctions	FALSE	canonical	3	28	junction_14	82.3031975474259	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	False	NA	-8	True	AATAAA	-12	NA	91536248	91504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
ES.19552.21	chr2	-	3432	16	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.6477643886205	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATAGCTTCCTATTC	NA	False	NA	-9	True	AATAAA	-11	NA	91540892	91504971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519046_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.23	chr2	-	2768	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	-217	1000	-217	665	multi-exon	FALSE	canonical	3	217	junction_4	20.2170445141937	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTTTGGGGTTAGCA	NA	False	NA	0	True	NA	NA	NA	91541138	91505962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.24	chr2	-	5073	16	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	25	650	intron_retention	FALSE	canonical	0	0	junction_11	84.3997367031175	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATATTTTATAGAAGTA	NA	False	NA	-15	True	NA	NA	NA	91540896	91505977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519046_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.25	chr2	-	2698	17	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	21	647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	88.8629343075616	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGATATTTTATAGAA	NA	False	NA	-18	True	NA	NA	NA	91540900	91505980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91536933_91537120_91540591
ES.19552.27	chr2	-	2624	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	-37	1017	20	647	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGATATTTTATAGAA	NA	False	NA	-18	True	NA	NA	NA	91540901	91505980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.28	chr2	-	1631	9	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	46	643	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	101.08010437272	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAATCAGATATTTTAT	NA	False	NA	-22	True	NA	NA	NA	91515551	91505984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512455_91515013_91515105_91515495
ES.19552.29	chr2	-	2441	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	8	641	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGAAATCAGATATTTT	NA	False	NA	-24	True	NA	NA	NA	91540913	91505986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.3	chr2	-	3264	14	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-8721	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.257348117813	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	2148	False	NA	-1	True	AATAAA	-19	NA	91524318	91504963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512199_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269
ES.19552.30	chr2	-	2450	16	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-112	641	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_15	65.7894283976452	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGAAATCAGATATTTT	NA	False	NA	-24	True	NA	NA	NA	91536191	91505986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535938
ES.19552.31	chr2	-	2398	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	4	1149	4	516	multi-exon	FALSE	canonical	3	217	junction_4	20.2170445141937	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCCCAAAGGCTGCAAC	NA	False	NA	-1	True	NA	NA	NA	91540917	91506111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.32	chr2	-	2249	16	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-37	515	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_15	65.7894283976452	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCCCAAAGGCTGCAA	NA	False	NA	-2	True	NA	NA	NA	91536116	91506112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535938
ES.19552.33	chr2	-	4731	12	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	9930	511	intron_retention	FALSE	canonical	3	217	junction_2	23.3294762652297	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCATTTCCCAAAGGCT	317	False	NA	-6	True	NA	NA	NA	91526149	91506116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269
ES.19552.34	chr2	-	2308	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-113	485	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGACAAGTATTCCA	NA	False	NA	-32	True	NA	NA	NA	91536192	91506142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
ES.19552.35	chr2	-	2322	1	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	21	-19521	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTACAGTTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	91540900	91538578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91538600_91540900
ES.19552.4	chr2	-	3694	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-223	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91541144	91504964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.5	chr2	-	3382	14	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	72.7026040733979	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91540892	91504964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.6	chr2	-	3589	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-216	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCCTATTCCAAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	91536295	91504964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
ES.19552.7	chr2	-	3430	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	69.3937302349309	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCCTATTCCAAATG	NA	False	NA	-3	True	AATAAA	-17	NA	91540900	91504965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.8	chr2	-	6207	16	NIC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	49	junction_6	57.0936851927504	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCCTATTCCAAATG	NA	False	NA	-3	True	AATAAA	-17	NA	91540937	91504965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ES.19552.9	chr2	-	3307	15	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_14	85.3925210604607	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCCTATTCCAAATG	NA	False	NA	-3	True	AATAAA	-17	NA	91536105	91504965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535938
ES.19553.1	chr2	-	171	1	Antisense	novelGene_ENSMUSG00000027243.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAATCATGAGAG	NA	False	NA	NA	False	NA	NA	NA	91544084	91543913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91543900_91544100
ES.19554.1	chr2	-	1970	2	Antisense	novelGene_ENSMUSG00000040506.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	91569070	91561821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91562183_91567461
ES.19554.2	chr2	-	157	1	Intergenic	novelGene_16214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATGAAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	91563769	91563612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91563600_91563800
ES.19554.3	chr2	-	3209	2	Antisense	novelGene_ENSMUSG00000040506.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91567405	91563988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91564772_91564979
ES.19554.4	chr2	-	209	1	Intergenic	novelGene_16215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGCCAGGCATGGTGAC	NA	False	NA	NA	False	NA	NA	NA	91564343	91564134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91564100_91564300
ES.19554.5	chr2	-	215	1	Intergenic	novelGene_16216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGACCTTGATATGTT	NA	False	NA	NA	False	NA	NA	NA	91564975	91564760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91564800_91565000
ES.19555.1	chr2	-	1648	1	Intergenic	novelGene_16217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9890	False	NA	NA	False	NA	NA	NA	91575095	91573447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91573400_91575100
ES.19556.1	chr2	-	3202	1	Intergenic	novelGene_16218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGATCCTAGAGTCAGT	2865	False	NA	NA	False	NA	NA	NA	91582120	91578918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91578900_91582100
ES.19557.1	chr2	-	332	1	Intergenic	novelGene_16219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	2095	False	NA	NA	False	NA	NA	NA	91582890	91582558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91582600_91582900
ES.19557.2	chr2	-	180	1	Intergenic	novelGene_16220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	2095	False	NA	NA	False	NA	NA	NA	91582890	91582710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91582700_91582900
ES.19558.1	chr2	-	153	1	Intergenic	novelGene_16222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	91592635	91592482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91592500_91592600
ES.19559.1	chr2	-	5735	1	Intergenic	novelGene_16224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAAAGCAAAACACTT	NA	False	NA	NA	False	NA	NA	NA	91610362	91604627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91604600_91610400
ES.19559.2	chr2	-	174	1	Intergenic	novelGene_16225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAAAGAAAATCA	NA	False	NA	NA	False	NA	NA	NA	91606618	91606444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91606400_91606600
ES.1956.1	chr1	+	6341	19	NNC	ENSMUSG00000028354.14	novel	6442	18	NA	NA	-35	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	4.01578674855582	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTCAGCTGTGT	NA	False	NA	5	True	AATAAA	-14	NA	174329355	174650293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_174331158_174364610_174364778_174409481_174409630_174420626_174420683_174435947_174437194_174437327_174437519_174440072_174440218_174474671_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
ES.1956.2	chr1	+	6460	18	FSM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	-18	0	-18	0	multi-exon	FALSE	canonical	1	3	junction_6	3.5625891599357	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCAGCTGTGTGC	NA	False	NA	7	True	AATAAA	-16	NA	174329372	174650295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_174331158_174364610_174364778_174409481_174409630_174420626_174420683_174435947_174437519_174440072_174440218_174474671_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
ES.1956.3	chr1	+	2282	1	NIC	ENSMUSG00000028354.14	novel	6442	18	NA	NA	34	-78412	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGTGTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	174329424	174331706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_174329400_174331700
ES.1956.4	chr1	+	2601	12	ISM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	145276	-8	34552	8	3prime_fragment	FALSE	canonical	1	3	junction_10	3.81601670214825	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGTGTGCATATCATA	NA	False	NA	15	True	AATAAA	-24	NA	174474666	174650303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
ES.1956.5	chr1	+	2511	11	ISM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	164817	-10	-47684	10	3prime_fragment	FALSE	canonical	1	3	junction_9	3.89871773792359	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGCATATCATATG	NA	False	NA	17	True	AATAAA	-26	NA	174494207	174650305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
ES.1956.6	chr1	+	1544	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	174643990	174645534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_174644000_174645500
ES.19560.1	chr2	-	1345	2	Antisense	novelGene_ENSMUSG00000040506.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACGAAGTAACTACT	NA	False	NA	NA	False	NA	NA	NA	91613471	91612058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_91613030_91613097
ES.19560.2	chr2	-	1361	1	Intergenic	novelGene_16226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	91613469	91612108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91612100_91613500
ES.19561.1	chr2	-	1938	1	Intergenic	novelGene_16228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8778	False	NA	NA	False	NA	NA	NA	91620492	91618554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91618600_91620500
ES.19562.1	chr2	-	422	1	Intergenic	novelGene_16229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9730	False	NA	NA	False	NA	NA	NA	91626191	91625769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91625800_91626200
ES.19563.1	chr2	-	210	1	Intergenic	novelGene_16230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATCTGGATTACACAAT	3635	False	NA	NA	False	NA	NA	NA	91632825	91632615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91632600_91632800
ES.19564.1	chr2	-	183	1	Intergenic	novelGene_16232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGGATTCAACAAAAA	6152	False	NA	NA	False	NA	NA	NA	91643875	91643692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91643700_91643900
ES.19565.1	chr2	-	182	1	Intergenic	novelGene_16233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91661063	91660881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91660900_91661100
ES.19566.1	chr2	-	175	1	Intergenic	novelGene_16234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGACATAATGGAG	9100	False	NA	NA	False	NA	NA	NA	91666967	91666792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91666800_91667000
ES.19567.1	chr2	-	137	1	Intergenic	novelGene_16236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	760	False	NA	NA	False	NA	NA	NA	91716667	91716530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91716500_91716700
ES.19568.1	chr2	-	188	1	Intergenic	novelGene_16237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	91723459	91723271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91723300_91723500
ES.19569.11	chr2	-	683	4	NIC	ENSMUSG00000027239.15	novel	1054	5	NA	NA	-223	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	1308.93400224084	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762348	91760172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91760461_91761162_91761325_91761440_91761600_91762274
ES.19569.12	chr2	-	1788	2	NIC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-33	0	intron_retention	FALSE	canonical	3	2268	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762077	91760172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91761600_91761716
ES.19569.13	chr2	-	1660	2	NIC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-33	0	intron_retention	FALSE	canonical	3	1617	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762077	91760172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91761794_91762038
ES.19569.16	chr2	-	735	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1138.49604742397	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762079	91760172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91760461_91761162_91761325_91761440_91761600_91761708_91761794_91762038
ES.19569.18	chr2	-	4683	30	NIC	ENSMUSG00000040479.13	novel	3512	31	NA	NA	-460	2	intron_retention	FALSE	canonical	3	27	junction_29	51.9041465401545	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTTTTTTTCTTGT	NA	False	NA	-1	True	AGTAAA	-20	NA	91806669	91763166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ES.19569.19	chr2	-	4547	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_29	83.2832449469213	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTTTTTTTCTTGT	NA	False	NA	-1	True	AGTAAA	-20	NA	91793998	91763166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769824_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91775571_91775812_91793630
ES.19569.2	chr2	-	3697	32	NNC	ENSMUSG00000040479.13	novel	4169	32	NA	NA	-96	25246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.6490267894338	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAATTAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	91794098	91737922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91737941_91763171_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.20	chr2	-	3652	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	-64	-4	-64	2	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTCTTTTTTTCTTGT	NA	False	NA	-1	True	AGTAAA	-20	NA	91794066	91763166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.22	chr2	-	3636	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_25	54.9293384469741	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793956	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771477_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.23	chr2	-	3677	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	-51	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	54.0594323150199	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91794053	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.24	chr2	-	4402	29	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	101	1	intron_retention	FALSE	canonical	2	4	junction_6	55.9127874096648	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793901	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766428_91766869_91766911_91767046_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.25	chr2	-	4102	32	NNC	ENSMUSG00000040479.13	novel	4169	32	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	77.5401745423243	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91780698	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91775518_91776270_91780565
ES.19569.27	chr2	-	3716	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	87	1	intron_retention	FALSE	canonical	3	69	junction_8	44.3009650611674	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793915	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.28	chr2	-	3408	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	115	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.3934175379924	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793887	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767465_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.29	chr2	-	3613	30	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	55	1	intron_retention	FALSE	canonical	3	212	junction_9	28.42726496832	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTCTTTTTTTCTTG	NA	False	NA	-2	True	AGTAAA	-19	NA	91793947	91763167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.3	chr2	-	877	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	-79	-25	-79	2	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCTTCCCAGTTTG	NA	False	NA	NA	False	AATAAA	-44	NA	91762204	91760147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
ES.19569.30	chr2	-	3580	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.5523776868881	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793989	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767507_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.32	chr2	-	4366	32	NIC	ENSMUSG00000040479.13	novel	4169	32	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_30	70.8013298169615	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91794031	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91775518_91776270_91793630
ES.19569.34	chr2	-	4040	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	-528	0	-528	0	multi-exon	FALSE	canonical	3	27	junction_30	51.2884652399218	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91806737	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ES.19569.35	chr2	-	5311	26	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	84	0	intron_retention	FALSE	canonical	3	9	junction_4	57.1391844534029	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793918	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91765244_91765425_91766307_91766869_91766911_91767046_91767500_91767782_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.36	chr2	-	4232	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	102	0	intron_retention	FALSE	canonical	3	9	junction_5	54.7694769052583	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793900	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.38	chr2	-	4406	28	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	91	0	intron_retention	FALSE	canonical	3	212	junction_16	27.1028119254464	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793911	91763168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.4	chr2	-	912	5	FSM	ENSMUSG00000027239.15	ENSMUST00000090602.6	714	5	-37	-161	-37	0	multi-exon	FALSE	canonical	3	492	junction_4	939.630878324036	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	False	NA	NA	False	AATAAA	-42	NA	91762081	91760149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761878
ES.19569.40	chr2	-	4442	29	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	212	junction_17	26.7192508754819	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTTCTTTTTTTCT	NA	False	NA	-4	True	AGTAAA	-17	NA	91794064	91763169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.41	chr2	-	3472	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	84.4382711861374	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTTCTTTTTTTCT	NA	False	NA	-4	True	AGTAAA	-17	NA	91793947	91763169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771184_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.42	chr2	-	3452	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	108	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	55.4560382283208	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTTCTTTTTTTCT	NA	False	NA	-4	True	AGTAAA	-17	NA	91793894	91763169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770218_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.45	chr2	-	3828	31	NNC	ENSMUSG00000040479.13	novel	3512	31	NA	NA	-405	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	67.5228027327724	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91806614	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767896_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ES.19569.46	chr2	-	3226	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	351	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.6746030824388	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793651	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764181_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.47	chr2	-	3646	31	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	54.8848187874692	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793943	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766428_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.48	chr2	-	4303	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	4	0	intron_retention	FALSE	canonical	2	2	junction_17	55.1356127264886	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793998	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769824_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.49	chr2	-	3428	31	NNC	ENSMUSG00000040479.13	novel	3393	31	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_30	77.0692041104761	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91795938	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
ES.19569.5	chr2	-	1300	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	-223	-23	-223	0	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	False	NA	NA	False	AATAAA	-42	NA	91762865	91760149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
ES.19569.50	chr2	-	4085	24	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	2924	0	intron_retention	FALSE	canonical	1	2	junction_14	71.8683684373908	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91772678	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91765205_91765425_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768907_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634
ES.19569.51	chr2	-	3543	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	55.2862852191512	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793948	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765218_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.52	chr2	-	3372	31	NNC	ENSMUSG00000040479.13	novel	3393	31	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_30	63.6317967336736	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91795921	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
ES.19569.53	chr2	-	3449	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	53.6148922097832	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91793954	91763170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767896_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.56	chr2	-	3552	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.6746030824388	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91793957	91763171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764202_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.57	chr2	-	4373	29	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	1	0	intron_retention	FALSE	canonical	3	212	junction_8	28.7022007262616	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91794001	91763171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.59	chr2	-	3561	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.3881355125406	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91793986	91763171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768679_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.6	chr2	-	807	5	NNC	ENSMUSG00000027239.15	novel	771	5	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_4	1134.21922484148	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTCTTTTTTAATAT	NA	False	NA	NA	False	AATAAA	-22	NA	91762077	91760169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761959
ES.19569.60	chr2	-	3584	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	55.5446267028194	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91794026	91763171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772657_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.61	chr2	-	3464	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	65.5551795784288	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91793949	91763171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.62	chr2	-	3605	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.5292698445184	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91794001	91763172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766328_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.63	chr2	-	4981	26	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	-64	-1	intron_retention	FALSE	canonical	1	2	junction_25	58.9483027745498	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91794066	91763172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91793630
ES.19569.64	chr2	-	3106	28	NNC	ENSMUSG00000040479.13	novel	3109	28	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	67.2067220166626	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91795940	91763172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91795764
ES.19569.65	chr2	-	3498	31	NNC	ENSMUSG00000040479.13	novel	3393	31	NA	NA	-179	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	70.8117143479021	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91796124	91763172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767911_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
ES.19569.69	chr2	-	3611	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	83	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	77.3254952924469	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTGTTTTCTTTTTT	NA	False	NA	-7	True	AGTAAA	-14	NA	91793919	91763172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769824_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771477_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.7	chr2	-	1888	1	Genic_Genomic	ENSMUSG00000027239.15	novel	NA	NA	NA	NA	-15	1	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762059	91760171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_91760200_91762100
ES.19569.70	chr2	-	3339	22	NNC	ENSMUSG00000040479.13	novel	3109	28	NA	NA	-2651	-2	intron_retention	FALSE	canonical	1	1	junction_5	74.4362333441659	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91771024	91763173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765218_91765425_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949
ES.19569.71	chr2	-	3477	30	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	110	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.646526702273	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTGTTTTCTTTTT	NA	False	NA	-8	True	AGTAAA	-13	NA	91793892	91763173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765218_91766162_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768666_91768737_91768853_91768910_91769061_91769141_91769668_91769824_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ES.19569.8	chr2	-	718	5	NNC	ENSMUSG00000027239.15	novel	773	5	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1148.26420631316	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	91762077	91760171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762046
ES.19569.9	chr2	-	815	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	-67	23	25	0	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762100	91760172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
ES.1957.1	chr1	-	176	2	Antisense	novelGene_ENSMUSG00000028354.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCTAACTTCTGA	NA	False	NA	NA	False	NA	NA	NA	174374163	174351393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_174351402_174373995
ES.1957.2	chr1	-	177	1	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGAACCTTTC	NA	False	NA	NA	False	NA	NA	NA	174374165	174373988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_174374000_174374200
ES.19570.1	chr2	-	2636	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	-66	33	-66	-33	multi-exon	FALSE	canonical	2	4	junction_10	5.08603662934522	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91854913	91812705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ES.19571.1	chr2	+	180	1	Intergenic	novelGene_16241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGATTTATTT	1442	False	NA	NA	False	NA	NA	NA	91965316	91965496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91965300_91965500
ES.19572.1	chr2	+	214	1	Intergenic	novelGene_16242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGGGCTGGAGAGATG	4561	False	NA	NA	False	NA	NA	NA	91968435	91968649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91968400_91968600
ES.19573.1	chr2	+	174	1	Intergenic	novelGene_16243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGACATTAC	4783	False	NA	NA	False	NA	NA	NA	91968657	91968831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91968700_91968800
ES.19574.1	chr2	+	159	1	Intergenic	novelGene_16244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	91988837	91988996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_91988800_91989000
ES.19575.1	chr2	-	159	1	Intergenic	novelGene_16245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	8934	False	NA	NA	False	NA	NA	NA	91992964	91992805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_91992800_91993000
ES.19576.1	chr2	+	4270	19	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-292	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	5.97964654804163	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92014158	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92014698_92044393_92044435_92045793_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.10	chr2	+	3591	19	NIC	ENSMUSG00000058318.16	novel	3710	18	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	7.45521608765167	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92014678	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92014698_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92181953_92181977_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.11	chr2	+	5920	18	NIC	ENSMUSG00000058318.16	novel	2701	19	NA	NA	295	-3	intron_retention	FALSE	canonical	2	3	junction_1	6.63742143620543	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAACGCTGTGTAGT	NA	False	NA	-1	True	ATTAAA	-14	NA	92015431	92192171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92017754_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.12	chr2	+	5408	21	NNC	ENSMUSG00000058318.16	novel	2701	19	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_2	7.1133676975115	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92015794	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92016955_92017388_92017754_92040574_92040748_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.13	chr2	+	3801	19	NIC	ENSMUSG00000058318.16	novel	2701	19	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	6.77048788292539	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGCTGTGTAGTGACAG	NA	False	NA	4	True	ATTAAA	-19	NA	92015794	92192176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92015934_92016895_92016955_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.14	chr2	+	4891	19	NIC	ENSMUSG00000058318.16	novel	2701	19	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_1	6.29422623923046	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTAGTGACAGTTTT	NA	False	NA	8	True	ATTAAA	-23	NA	92015794	92192180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92016955_92044393_92044435_92045793_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.15	chr2	+	3838	19	NIC	ENSMUSG00000058318.16	novel	2701	19	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.22048586884051	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTAGTGACAGTTTT	NA	False	NA	8	True	ATTAAA	-23	NA	92015817	92192180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92015934_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.16	chr2	+	2908	19	NNC	ENSMUSG00000058318.16	novel	6310	16	NA	NA	767	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.17497687541563	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGAGATTTAACTAA	NA	False	NA	NA	False	NA	NA	NA	92017576	92191272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92017754_92021210_92021321_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92179222_92179303_92179732_92179794_92181953_92181977_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.17	chr2	+	2811	18	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-7513	26	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	4.70367595334207	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGAGATTTAACTAA	NA	False	NA	NA	False	NA	NA	NA	92044393	92191272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.18	chr2	+	181	1	Intergenic	novelGene_16248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAACATATTTTA	NA	False	NA	NA	False	NA	NA	NA	92046545	92046726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92046500_92046700
ES.19576.19	chr2	+	179	2	Intergenic	novelGene_16250	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	87	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	92141929	92166698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92142086_92166675
ES.19576.2	chr2	+	3837	19	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.02552664868322	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92014158	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014323_92014625_92014698_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.20	chr2	+	179	1	Intergenic	novelGene_16251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	92141930	92142109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92141900_92142100
ES.19576.21	chr2	+	5749	10	NIC	ENSMUSG00000058318.16	novel	1735	14	NA	NA	-202	0	intron_retention	FALSE	canonical	1	1	junction_1	6.71648055986996	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92150571	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92150805_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.22	chr2	+	177	1	Intergenic	novelGene_16253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTGGGGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	92158959	92159136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92159000_92159100
ES.19576.23	chr2	+	2758	1	NIC	ENSMUSG00000058318.16	novel	6187	16	NA	NA	70	2856	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCAGGTGCCAGCTACTT	NA	False	NA	NA	False	NA	NA	NA	92161141	92163899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92161100_92163900
ES.19576.24	chr2	+	1221	5	ISM	ENSMUSG00000058318.16	ENSMUST00000159961.8	1735	14	123220	-457	2788	-6	3prime_fragment	FALSE	canonical	2	16	junction_4	2.27760839478607	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAACGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92182043	92191232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.25	chr2	+	3323	4	ISM	ENSMUSG00000058318.16	ENSMUST00000159961.8	1735	14	127059	-1399	6627	0	3prime_fragment	FALSE	canonical	3	16	junction_3	2.49443825784929	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	402	False	NA	2	True	ATTAAA	-17	NA	92185882	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.26	chr2	+	1630	2	ISM	ENSMUSG00000058318.16	ENSMUST00000159961.8	1735	14	130624	-1261	10192	-138	3prime_fragment	FALSE	canonical	3	16	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAATAAAAGATA	3967	False	NA	NA	False	AAAACA	-15	NA	92189447	92192036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_92189555_92190513
ES.19576.27	chr2	+	3927	1	ISM	ENSMUSG00000058318.16	ENSMUST00000044036.15	6187	16	267623	0	11829	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCCTCTTGGTGTTGCGT	1289	False	NA	3	True	AATAAA	-16	NA	92191084	92195011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_92191100_92195000
ES.19576.3	chr2	+	3837	20	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.93619516190971	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTAGTGACAGTTTT	NA	False	NA	8	True	ATTAAA	-23	NA	92014158	92192180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014194_92014635_92014698_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92060982_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.4	chr2	+	3828	20	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-290	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.40117717705717	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92014160	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014201_92014637_92014698_92044393_92044435_92045793_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.5	chr2	+	4141	18	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-287	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	6.26629364027566	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTAGTGACAGTTTT	NA	False	NA	8	True	ATTAAA	-23	NA	92014163	92192180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92014698_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.6	chr2	+	2974	19	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-285	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6.98256205411067	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGAGATTTAACTAA	NA	False	NA	NA	False	NA	NA	NA	92014165	92191272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014698_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150669_92150788_92150805_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.7	chr2	+	3341	18	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-283	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.37197536358103	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTAGTGTTACTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	92014167	92192062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014197_92014622_92014698_92044393_92044435_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.8	chr2	+	3805	20	NNC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	-283	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.44043666040831	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACGCTGTGTAGTGAC	NA	False	NA	2	True	ATTAAA	-17	NA	92014167	92192174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92014197_92014637_92014698_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19576.9	chr2	+	3655	19	NIC	ENSMUSG00000058318.16	novel	3900	19	NA	NA	2	-119	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.6590362569986	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGGTCTTCCTAGTGTT	NA	False	NA	NA	False	AATAAA	-5	NA	92014648	92192055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92014698_92044393_92044435_92045793_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158659_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ES.19577.1	chr2	-	1808	1	Intergenic	novelGene_16246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAAGGGAATGAATGAG	NA	False	NA	NA	False	NA	NA	NA	92031591	92029783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92029800_92031600
ES.19578.1	chr2	-	190	2	Antisense	novelGene_ENSMUSG00000083951.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	179	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	92112198	92037678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_92037819_92112148
ES.19578.2	chr2	-	191	1	Intergenic	novelGene_16247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	92037869	92037678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92037700_92037900
ES.19578.3	chr2	-	187	1	Intergenic	novelGene_16249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATCC	NA	False	NA	NA	False	NA	NA	NA	92112200	92112013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92112000_92112200
ES.19579.1	chr2	-	198	1	Intergenic	novelGene_16252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAAATGGGAAT	NA	False	NA	NA	False	NA	NA	NA	92146256	92146058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92146100_92146300
ES.1958.1	chr1	-	6236	1	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	174588075	174581839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_174581800_174588100
ES.19580.1	chr2	-	2811	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-6	162	intron_retention	FALSE	canonical	3	78	junction_9	20.7327314612946	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGCACGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	92201408	92195228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.10	chr2	-	4634	10	NIC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	98	junction_9	15.4128373622625	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201377	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92201009_92201083_92201239_92201325
ES.19580.11	chr2	-	3036	12	NIC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	37.475722168707	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201378	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200204_92201009_92201083_92201239_92201325
ES.19580.12	chr2	-	2454	15	NNC	ENSMUSG00000040434.17	novel	2377	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	41.0659002490546	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201352	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200147_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
ES.19580.13	chr2	-	2441	15	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.5269679483365	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201408	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197513_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.14	chr2	-	4051	3	NIC	ENSMUSG00000040434.17	novel	5029	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	118	junction_2	0.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92199992	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196942_92197360
ES.19580.15	chr2	-	2613	14	NIC	ENSMUSG00000040434.17	novel	2377	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	13	junction_11	33.1940680520805	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201370	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
ES.19580.18	chr2	-	2744	14	NIC	ENSMUSG00000040434.17	novel	2621	15	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_9	45.0204424310378	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201365	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200204_92200329_92200521_92200605_92200690_92201009_92201083_92201239_92201325
ES.19580.19	chr2	-	2601	14	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-7	1	intron_retention	FALSE	canonical	3	5	junction_9	34.334415256502	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTGAGTGTTTTGT	NA	False	NA	-4	True	GGGGCT	-44	NA	92201388	92195394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200147_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.2	chr2	-	2506	14	FSM	ENSMUSG00000040434.17	ENSMUST00000090582.11	2291	14	-28	-187	-4	162	multi-exon	FALSE	canonical	0	0	junction_9	42.5506311706155	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGCACGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	92201406	92195228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.20	chr2	-	2500	15	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.4018715468702	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201388	92195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196489_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.22	chr2	-	1654	5	NIC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	-667	0	intron_retention	FALSE	canonical	3	116	junction_4	2.1650635094611	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92197788	92195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196942_92197360_92197522_92197613
ES.19580.23	chr2	-	3767	13	NIC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_9	46.4378317993231	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201412	92195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92199718_92199834_92200007_92200204_92200329_92200910_92201009_92201083_92201239_92201325
ES.19580.24	chr2	-	4755	9	NIC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	98	junction_8	16.1554944214035	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201389	92195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92198010_92198098_92201009_92201083_92201239_92201325
ES.19580.25	chr2	-	2358	15	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.6682764412215	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201366	92195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200284_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.28	chr2	-	2316	14	NNC	ENSMUSG00000040434.17	novel	2310	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.2532868046921	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATGTGTGAGTGTTT	NA	False	NA	-7	True	GGGGCT	-41	NA	92201372	92195397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197513_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200910_92201009_92201083_92201239_92201325
ES.19580.30	chr2	-	2323	14	FSM	ENSMUSG00000040434.17	ENSMUST00000176289.8	2310	14	-14	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_10	44.6240044723457	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATGTGTGAGTGTTT	NA	False	NA	-7	True	GGGGCT	-41	NA	92201370	92195397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200910_92201009_92201083_92201239_92201325
ES.19580.32	chr2	-	2432	15	NNC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	43.5269679483365	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCTTATGTGTGAGT	NA	False	NA	-11	True	GGGGCT	-37	NA	92201388	92195401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197534_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.4	chr2	-	2329	14	FSM	ENSMUSG00000040434.17	ENSMUST00000090582.11	2291	14	-14	-24	10	0	multi-exon	FALSE	canonical	0	0	junction_9	42.5506311706155	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201392	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.5	chr2	-	2541	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_9	35.4661268514924	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201382	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.7	chr2	-	4279	11	NIC	ENSMUSG00000040434.17	novel	2291	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	81	junction_7	20.1057205789795	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201407	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92198010_92198098_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19580.8	chr2	-	2803	13	NIC	ENSMUSG00000040434.17	novel	2377	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	13	junction_10	33.7885582211888	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201367	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200605_92200907_92201009_92201083_92201239_92201325
ES.19580.9	chr2	-	2442	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	2	1	2	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTCTG	NA	False	NA	-1	True	NA	NA	NA	92201400	92195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ES.19581.1	chr2	+	1133	11	FSM	ENSMUSG00000027222.15	ENSMUST00000155891.8	1167	11	36	-2	36	1	multi-exon	FALSE	canonical	2	7	junction_1	67.8416538713496	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGCTCTGTGTCATCA	NA	False	NA	22	True	AATAAA	-22	NA	92205056	92211563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_92205167_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.10	chr2	+	827	6	NIC	ENSMUSG00000027222.15	novel	1167	11	NA	NA	2163	-1	intron_retention	FALSE	canonical	3	204	junction_2	20.0299775336868	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTGGCTCTGTGTCA	NA	False	NA	19	True	AATAAA	-19	NA	92208066	92211560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92208137_92208937_92209019_92209140_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.2	chr2	+	1656	10	ISM	ENSMUSG00000027222.15	ENSMUST00000155891.8	1167	11	563	-3	-67	2	3prime_fragment	FALSE	canonical	3	204	junction_5	16.4008430978711	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTCATCAG	NA	False	NA	23	True	AATAAA	-23	NA	92205583	92211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.3	chr2	+	1444	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	-50	-2	-50	2	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTCATCAG	NA	False	NA	23	True	AATAAA	-23	NA	92205600	92211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.4	chr2	+	1187	10	NIC	ENSMUSG00000027222.15	novel	1392	11	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	71.2716936868183	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTCTGTGTCAT	NA	False	NA	20	True	AATAAA	-20	NA	92205720	92211561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92206021_92206215_92206252_92206971_92207049_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.5	chr2	+	3606	11	FSM	ENSMUSG00000027222.15_ENSMUSG00000044916.11	ENSMUST00000028650.9	1392	11	170	-2384	-17	-2	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTGGCTCCATAGCT	NA	False	NA	NA	False	CATAAA	-16	NA	92205820	92213946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.6	chr2	+	3507	11	Fusion	ENSMUSG00000027222.15_ENSMUSG00000044916.11	novel	1392	11	NA	NA	8	-2	intron_retention	FALSE	canonical	2	6	junction_1	68.1336921060352	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTGGCTCCATAGCT	NA	False	NA	NA	False	CATAAA	-16	NA	92205845	92213946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_92205947_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19581.7	chr2	+	1841	9	NIC	ENSMUSG00000027222.15	novel	1392	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	202	junction_1	17.4212513901843	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTCTGTGTCAT	NA	False	NA	20	True	AATAAA	-20	NA	92205846	92211561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209452_92209560_92209681_92210754
ES.19581.8	chr2	+	2902	6	NIC	ENSMUSG00000027222.15	novel	852	8	NA	NA	10	0	intron_retention	FALSE	canonical	1	4	junction_3	90.6037526816633	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTCTGTGTCAT	NA	False	NA	20	True	AATAAA	-20	NA	92205847	92211561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_92206021_92206215_92206252_92206971_92207049_92208035_92208137_92208937_92209452_92209560
ES.19581.9	chr2	+	1112	11	NNC	ENSMUSG00000027222.15	novel	1392	11	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	68.1336921060352	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATGTGGCTCTGTGTC	NA	False	NA	18	True	AATAAA	-18	NA	92205853	92211559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92205947_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ES.19582.1	chr2	-	3024	12	FSM	ENSMUSG00000027223.16	ENSMUST00000050312.3	2930	12	-85	-9	-85	5	multi-exon	FALSE	canonical	3	50	junction_10	15.2158030073021	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGTGTATTTACTTGG	NA	False	NA	-1	True	ATTAAA	-23	NA	92231693	92214015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
ES.19582.10	chr2	-	1266	7	NNC	ENSMUSG00000027223.16	novel	3274	12	NA	NA	6765	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.9309150093343	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCAGAGTGGGTGTATT	NA	False	NA	-8	True	ATTAAA	-16	NA	92216311	92214022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92214454_92214500_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139
ES.19582.11	chr2	-	4092	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	-35	-81	-35	81	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTGTTGGAGTG	NA	False	NA	NA	False	AGTAAA	-16	NA	92264423	92233909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.12	chr2	-	3787	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	27.7646543839078	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264422	92233990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92244203_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.14	chr2	-	3872	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.9539781018624	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264336	92233990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253356_92254889_92255033_92257246_92257356_92264156
ES.19582.15	chr2	-	9192	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7259792865455	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264381	92233990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92237420_92237769_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92244203_92244279_92246493_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.16	chr2	-	3538	1	NIC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	25205	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92237532	92233994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92234000_92237500
ES.19582.17	chr2	-	4030	13	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	2	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	39.1545193928988	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92264379	92233994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92237150_92237218_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.18	chr2	-	3975	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	30.7210859828708	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92264379	92233994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252608_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.19	chr2	-	4441	10	NIC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	88	junction_8	9.10568944379906	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92264398	92233994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92236166_92241970_92242113_92242958_92243497_92243611_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.2	chr2	-	4681	11	NIC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	12	4	intron_retention	FALSE	canonical	3	57	junction_10	12.8467894822014	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGGTGTATTTACTTG	NA	False	NA	-2	True	ATTAAA	-22	NA	92231596	92214016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92221487_92231373
ES.19582.20	chr2	-	4119	10	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	8521	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	32.8276456814627	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTTGTGTAATCT	NA	False	NA	NA	False	TATAAA	-20	NA	92254216	92233994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92253585
ES.19582.22	chr2	-	4179	11	NIC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	2	-5	intron_retention	FALSE	canonical	3	88	junction_9	8.6694867206773	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTGTTGTGTAATC	NA	False	NA	NA	False	TATAAA	-19	NA	92264379	92233995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.23	chr2	-	3709	10	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	8527	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	42.9515949200125	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACTGTGTTGTGTAAT	NA	False	NA	NA	False	TATAAA	-18	NA	92254210	92233996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244285_92246493_92246640_92252506_92252596_92253222_92253408_92253984
ES.19582.24	chr2	-	3978	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	-13	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	30.1645624275619	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAAAACTGTGTTGTG	NA	False	NA	NA	False	TATAAA	-14	NA	92264401	92234000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244287_92246493_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.25	chr2	-	1955	10	NNC	ENSMUSG00000068742.12	novel	2160	11	NA	NA	8545	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	43.5909719954278	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92254192	92241610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92253585_92253698_92254026
ES.19582.26	chr2	-	2152	11	FSM	ENSMUSG00000068742.12	ENSMUST00000111278.2	2160	11	2	6	2	-6	multi-exon	FALSE	canonical	3	83	junction_4	10.4446158378372	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92264379	92241610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.27	chr2	-	2017	11	FSM	ENSMUSG00000068742.12	ENSMUST00000111278.2	2160	11	-10	153	-3	-153	multi-exon	FALSE	canonical	3	83	junction_4	10.4446158378372	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTGTCTTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	92264391	92241757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.28	chr2	-	3133	3	NNC	ENSMUSG00000049922.9	novel	2668	3	NA	NA	5	19451	intron_retention	TRUE	non_canonical	0	0	junction_1	27	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTGGGAAAGGACATGC	NA	False	NA	NA	False	TTTAAA	-6	NA	92290134	92263657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92263666_92283117_92285120_92289011
ES.19582.3	chr2	-	3279	11	NIC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	-39	4	intron_retention	FALSE	canonical	3	50	junction_9	14.871449156017	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGGTGTATTTACTTG	NA	False	NA	-2	True	ATTAAA	-22	NA	92231647	92214016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
ES.19582.31	chr2	-	2846	3	FSM	ENSMUSG00000049922.9	ENSMUST00000125276.2	2668	3	-184	6	-184	-6	multi-exon	FALSE	canonical	3	3	junction_2	25.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAAGATACAGC	NA	False	NA	NA	False	AATAAA	-15	NA	92291067	92283117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92285120_92289011_92289536_92290747
ES.19582.32	chr2	-	2547	3	NNC	ENSMUSG00000049922.9	novel	2668	3	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAAACAAGATACAG	NA	False	NA	NA	False	AATAAA	-14	NA	92290133	92283118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92285120_92289011_92289536_92290111
ES.19582.4	chr2	-	2946	12	NNC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	-85	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	25.3996160574873	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGGGTGTATTTACT	NA	False	NA	-4	True	ATTAAA	-20	NA	92231693	92214018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219551_92221380_92221487_92231373
ES.19582.5	chr2	-	3105	11	NIC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	-18	1	intron_retention	FALSE	canonical	3	50	junction_9	15.7101877773628	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTGGGTGTATTTAC	NA	False	NA	-5	True	ATTAAA	-19	NA	92231626	92214019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92214767_92215068_92215168_92215268_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
ES.19582.6	chr2	-	2906	13	NNC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	26.1438329248027	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTGGGTGTATTTAC	NA	False	NA	-5	True	ATTAAA	-19	NA	92231632	92214019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373_92231530_92231582
ES.19582.7	chr2	-	6993	18	Fusion	ENSMUSG00000027223.16_ENSMUSG00000068742.12	novel	2160	11	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_7	26.3638370332201	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGAGTGGGTGTATTTA	NA	False	NA	-6	True	ATTAAA	-18	NA	92264400	92214020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_92215168_92215268_92215609_92215757_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92221487_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ES.19582.8	chr2	-	2725	11	NNC	ENSMUSG00000027223.16	novel	2930	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.2514233280896	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGAGTGGGTGTATTTA	NA	False	NA	-6	True	ATTAAA	-18	NA	92231591	92214020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92214767_92215068_92215168_92215268_92215340_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219551_92221380_92221487_92231373
ES.19583.1	chr2	+	178	1	Intergenic	novelGene_16254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTTATTTATTGAGA	NA	False	NA	NA	False	NA	NA	NA	92298830	92299008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92298800_92299000
ES.19584.1	chr2	+	181	1	Intergenic	novelGene_16255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGAATGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	92341976	92342157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92342000_92342200
ES.19585.1	chr2	-	1048	1	Antisense	novelGene_ENSMUSG00000085261.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAGGTGATCTGACAC	NA	False	NA	NA	False	AGTAAA	-13	NA	92359845	92358797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_92358800_92359800
ES.19586.1	chr2	+	2515	4	NNC	ENSMUSG00000027221.6	novel	2680	3	NA	NA	-36504	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGAGTGTGATTTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	92393547	92445592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_92393667_92428960_92429122_92442038_92442169_92443487
ES.19587.1	chr2	-	180	1	Intergenic	novelGene_16256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	381	False	NA	NA	False	NA	NA	NA	92460105	92459925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92459900_92460100
ES.19588.1	chr2	+	5079	2	FSM	ENSMUSG00000085976.2	ENSMUST00000152230.2	715	2	115	-4479	115	4479	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCTAATTGTCTTT	4662	False	NA	NA	False	NA	NA	NA	92572689	92594032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_92573022_92589285
ES.19589.1	chr2	+	176	1	Intergenic	novelGene_16257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAACTTCTGC	NA	False	NA	NA	False	NA	NA	NA	92717575	92717751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92717600_92717800
ES.1959.1	chr1	-	178	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTTAAAAAAGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	174638083	174637905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_174637900_174638100
ES.19590.1	chr2	+	3515	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	40	206	40	-206	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTTCTTCTTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	92745482	92786197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ES.19591.1	chr2	-	158	1	Intergenic	novelGene_16258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92792560	92792402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92792400_92792600
ES.19592.1	chr2	-	3905	1	Genic_Genomic	ENSMUSG00000075028.13	novel	NA	NA	NA	NA	40204	2216	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCTTTCCAACTGTC	NA	False	NA	NA	False	AAGAAA	-21	NA	92804051	92800146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_92800100_92804100
ES.19592.10	chr2	-	3865	2	ISM	ENSMUSG00000075028.13	ENSMUST00000111272.3	3012	6	55034	3	22891	-3	3prime_fragment	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCAGGCTCCAGGATC	NA	False	NA	NA	False	AATAAA	-25	NA	92821364	92815054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_92817132_92819576
ES.19592.11	chr2	-	3306	7	NNC	ENSMUSG00000075028.13	novel	3012	6	NA	NA	-1241	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.62995563967658	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGCCAGGCTCCAGGA	NA	False	NA	NA	False	AATAAA	-23	NA	92845496	92815056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92817132_92819576_92819999_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844230_92845242
ES.19592.12	chr2	-	3360	7	NIC	ENSMUSG00000075028.13	novel	3012	6	NA	NA	-122	-13	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	1.91485421551268	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAACACAGCCAGG	NA	False	NA	NA	False	AATAAA	-15	NA	92876634	92815064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92817132_92819576_92819999_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
ES.19592.2	chr2	-	4221	7	NIC	ENSMUSG00000075028.13	novel	3744	8	NA	NA	-108	1011	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	1.59861050777091	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTGTTTTCATCTTTA	NA	False	NA	NA	False	AATACA	-29	NA	92876620	92801351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92804528_92810855_92811044_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
ES.19592.3	chr2	-	2480	1	Genic_Genomic	ENSMUSG00000075028.13	novel	NA	NA	NA	NA	40201	788	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAACGTAATTTTTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	92804054	92801574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_92801600_92804100
ES.19592.4	chr2	-	3765	7	NIC	ENSMUSG00000075028.13	novel	3744	8	NA	NA	-140	523	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	1.59861050777091	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTCTGGACTAGACTAT	NA	False	NA	NA	False	NA	NA	NA	92876652	92801839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_92804528_92810855_92811044_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
ES.19592.5	chr2	-	2033	1	Genic_Genomic	ENSMUSG00000075028.13	novel	NA	NA	NA	NA	40204	344	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGCTTCTTCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	92804051	92802018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_92802000_92804100
ES.19592.6	chr2	-	398	1	Genic_Genomic	ENSMUSG00000075028.13	novel	NA	NA	NA	NA	41630	135	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGACTAAGTTAATTA	NA	False	NA	NA	False	NA	NA	NA	92802625	92802227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_92802200_92802600
ES.19592.7	chr2	-	1964	7	FSM	ENSMUSG00000075028.13	ENSMUST00000178666.8	1870	7	-165	71	-142	-71	multi-exon	FALSE	canonical	1	1	junction_1	2.38047614284762	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGGCTGTGTGCTGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	92876654	92805321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_92806207_92810855_92811044_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92876323
ES.19592.8	chr2	-	1789	7	NNC	ENSMUSG00000075028.13	novel	4811	7	NA	NA	-925	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.98607881119482	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGGCTGTGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	92845180	92805322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92806207_92810855_92811044_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92845023
ES.19592.9	chr2	-	3252	7	NNC	ENSMUSG00000075028.13	novel	3012	6	NA	NA	-957	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.62995563967658	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCTCCAGGATCTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	92845212	92815050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_92817132_92819576_92819999_92823708_92823777_92842971_92843235_92843657_92843762_92844109_92844235_92845023
ES.19593.1	chr2	-	180	1	Intergenic	novelGene_16259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGAACATTTGAAG	NA	False	NA	NA	False	NA	NA	NA	92880717	92880537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_92880500_92880700
ES.19594.1	chr2	+	184	1	Intergenic	novelGene_16260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGATTGGTCCATTTT	NA	False	NA	NA	False	NA	NA	NA	92998489	92998673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_92998500_92998700
ES.19595.1	chr2	+	2758	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	-96	-8	-60	0	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017832	93032102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.11	chr2	+	3048	9	NNC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	4	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.81560290493	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017909	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93026632_93027043_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.12	chr2	+	3223	10	NNC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	144.625783607041	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATCTGCGTGGTGTCC	NA	False	NA	12	True	AAGAAA	-45	NA	93017909	93032096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93019433_93019569_93026632_93027043_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.13	chr2	+	2788	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-8	-9	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	126.560015407711	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCAATGAGAAACAATCT	NA	False	NA	1	True	AAGAAA	-34	NA	93017920	93032085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.14	chr2	+	2945	10	NNC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-5	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.130190384917	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017923	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93019433_93019569_93026864_93027051_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.15	chr2	+	3032	7	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	171	junction_2	49.462668302019	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017923	93032102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029804_93030130
ES.19595.16	chr2	+	2304	9	NNC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	-2	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.3717000596	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017926	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130_93031134_93031453
ES.19595.17	chr2	+	2922	10	NNC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	13	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	144.068485086301	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017941	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93019433_93019569_93026864_93027043_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.19	chr2	+	2783	7	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-33	-35	intron_retention	FALSE	canonical	3	171	junction_2	52.3601311432022	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017981	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.20	chr2	+	2646	8	NIC	ENSMUSG00000068735.15	novel	2899	7	NA	NA	-194	-35	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	129.711139043016	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93019341	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029737_93029804_93030130
ES.19595.21	chr2	+	2660	8	NIC	ENSMUSG00000068735.15	novel	2899	7	NA	NA	-172	-35	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	108.134836464217	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93019363	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.23	chr2	+	2538	8	NNC	ENSMUSG00000068735.15	novel	952	3	NA	NA	3288	-35	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	111.877119179564	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93022823	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93022907_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.24	chr2	+	2852	1	Intergenic	novelGene_16261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAACTGCTCGAAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	93023383	93026235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93023400_93026200
ES.19595.25	chr2	+	3311	8	NNC	ENSMUSG00000068735.15	novel	952	3	NA	NA	-3077	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.190435766829	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93026186	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93027043_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.26	chr2	+	3378	7	ISM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	8429	45	-2942	-35	3prime_fragment	FALSE	canonical	3	75	junction_1	88.8883506928151	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93026321	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.27	chr2	+	2291	7	NNC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	-2505	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	133.435898051794	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93026758	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029723_93030699
ES.19595.3	chr2	+	2888	8	NIC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	86.7591082085498	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGTGTCCTGTTTT	NA	False	NA	18	True	NA	NA	NA	93017852	93032102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.4	chr2	+	2676	8	NNC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	-4	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.085189379791	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017888	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_93018093_93027241_93027338_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.5	chr2	+	2663	8	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	105.728570463451	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTGCGTGGTGTCCTGT	NA	False	NA	15	True	NA	NA	NA	93017888	93032099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029737_93029804_93030130
ES.19595.6	chr2	+	2970	7	ISM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	15	45	2	-35	intron_retention	FALSE	canonical	3	75	junction_2	88.6216991236094	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAACAACAACAACAAC	NA	False	NA	-25	True	AAGAAA	-8	NA	93017907	93032059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701
ES.19595.7	chr2	+	2964	9	NIC	ENSMUSG00000068735.15	novel	2703	8	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	136.498111250669	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTGCGTGGTGTCCTGT	NA	False	NA	15	True	NA	NA	NA	93017908	93032099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ES.19595.8	chr2	+	2778	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	135.569170536667	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	16	True	NA	NA	NA	93017909	93032100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029737_93029804_93030130
ES.19595.9	chr2	+	3677	6	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	4	-2	intron_retention	FALSE	canonical	3	276	junction_1	14.9077161228674	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCGTGGTGTCCTGTT	NA	False	NA	16	True	NA	NA	NA	93017909	93032100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_93018093_93027241_93028094_93028607_93028667_93028883_93028933_93029239_93029804_93030130
ES.19596.1	chr2	-	3788	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-4	97	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7932571498307	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCAGTCTTGGGGGC	NA	False	NA	86	True	AATAAA	-12	NA	93164854	93032007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033428_93033509_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.10	chr2	-	3510	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-9708	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8606649072156	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93152568	93032105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033472_93033563_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93152500
ES.19596.11	chr2	-	3775	10	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	18.186957747209	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93164873	93032105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050379_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.13	chr2	-	3681	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-24	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8842740763171	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93164874	93032105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033466_93033560_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050379_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.15	chr2	-	3667	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_1	10.0776981498753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93164831	93032105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033454_93033535_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.16	chr2	-	2404	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7932571498307	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTCTCATTGGTTG	NA	False	NA	-12	True	TATAAA	-15	NA	93164806	93032105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93032324_93033643_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.17	chr2	-	3702	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8842740763171	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGTTTCTCATTGGTT	NA	False	NA	-13	True	TATAAA	-14	NA	93164887	93032106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033536_93033621_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050379_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.19	chr2	-	2580	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-33	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7932571498307	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATTGTTTCTCATTGGT	NA	False	NA	-14	True	TATAAA	-13	NA	93164883	93032107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93032282_93033500_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.21	chr2	-	3465	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	498	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8606649072156	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATTGTTTCTCATTGGT	NA	False	NA	-14	True	TATAAA	-13	NA	93164334	93032107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033472_93033563_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164309
ES.19596.22	chr2	-	159	1	Intergenic	novelGene_16262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	93101536	93101377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93101400_93101500
ES.19596.23	chr2	-	704	3	FSM	ENSMUSG00000027217.14	ENSMUST00000152141.2	674	3	-29	-1	-29	1	multi-exon	FALSE	canonical	3	11	junction_1	26	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCTGTGTGAGATTC	NA	False	NA	NA	False	ATTAAA	-16	NA	93164879	93141606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93141967_93142291_93142373_93164616
ES.19596.3	chr2	-	3710	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-20	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.7932571498307	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTGGTTGTTTTTTGT	NA	False	NA	-4	True	TATAAA	-23	NA	93164870	93032097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033536_93033621_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.4	chr2	-	3792	12	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.3106321369806	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164879	93032104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033472_93033565_93034768_93035020_93035109_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.5	chr2	-	3627	12	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	78	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.3106321369806	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164754	93032104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033472_93033565_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93141313_93141362_93142291_93142373_93164616
ES.19596.6	chr2	-	3805	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	-54	0	-36	0	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164886	93032104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19596.8	chr2	-	3931	12	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.4551947969125	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164833	93032104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93067306_93067365_93067970_93068092_93142291_93142373_93164616
ES.19596.9	chr2	-	3726	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	-49	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7932571498307	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164899	93032104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93033472_93033563_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ES.19597.1	chr2	-	1822	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	11	-9	11	9	multi-exon	TRUE	canonical	2	9	junction_8	1.4229164972073	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCGGTATCCTGAACT	NA	False	NA	NA	False	ATTAAA	-26	NA	93292836	93249446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
ES.19598.1	chr2	-	2644	1	Intergenic	novelGene_16263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAAAAAAGTGGGAGTGA	659	False	NA	NA	False	NA	NA	NA	93520061	93517417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93517400_93520100
ES.19599.1	chr2	-	2897	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	-13	-13	-13	13	multi-exon	TRUE	canonical	3	390	junction_9	31.3157237855525	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTTCTTGGTTATCCA	NA	False	NA	2	True	ATTAAA	-32	NA	93652926	93525962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.11	chr2	-	3058	16	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	164.700725222717	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652909	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650373_93650495_93651954_93652027_93652731
ES.19599.13	chr2	-	2784	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	114.321519068906	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652911	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.15	chr2	-	2825	14	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	121.487282311004	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652876	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636376_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.16	chr2	-	9340	12	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	8850	-2	intron_retention	FALSE	canonical	3	390	junction_8	28.3799486892296	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93644040	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743
ES.19599.17	chr2	-	2726	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	125.727770290506	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652902	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.18	chr2	-	3060	16	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.760532066661	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652902	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628275_93628406_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.19599.19	chr2	-	2852	14	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	154.660651620777	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652907	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.19599.2	chr2	-	2514	11	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	128.270963199003	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTAGAATGCTGGTT	NA	False	NA	-10	True	ATTAAA	-20	NA	93652911	93525974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.20	chr2	-	2847	14	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	161.319485281106	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652902	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537715_93560502_93560670_93569914_93570105_93592900_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.22	chr2	-	2972	15	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	156.488638173993	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTGTCTAGAATGCT	NA	False	NA	-14	True	ATTAAA	-16	NA	93652911	93525978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93581818_93581925_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.23	chr2	-	4064	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	390	junction_8	30.882730701082	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTGTCTAGAATGCT	NA	False	NA	-14	True	ATTAAA	-16	NA	93652903	93525978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93533538_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.25	chr2	-	13856	13	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_3	204.587729077012	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTGTCTAGAATGCT	NA	False	NA	-14	True	ATTAAA	-16	NA	93652925	93525978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93537723_93560502_93560670_93569914_93570105_93581818_93581925_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
ES.19599.28	chr2	-	2853	1	Intergenic	novelGene_16264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCCATTGTCAGTGCC	NA	False	NA	NA	False	NA	NA	NA	93532208	93529355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93529400_93532200
ES.19599.29	chr2	-	2851	14	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-2	324	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	126.164211581667	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCATGTCTTTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	93652900	93532976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.19599.3	chr2	-	2941	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	124.260444885995	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652911	93525975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.19599.30	chr2	-	2467	13	ISM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	2	7324	-1	1	5prime_fragment	FALSE	canonical	3	390	junction_8	29.4206796129676	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGATCCTTCGTGTAG	NA	False	NA	NA	False	AATATA	-18	NA	93652911	93533299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.31	chr2	-	4389	12	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	2	-1391	combination_of_known_junctions	FALSE	canonical	3	84	junction_10	133.066192439131	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTGCATGTTTTCAC	NA	False	NA	NA	False	AATAAA	-15	NA	93652908	93535274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.19599.32	chr2	-	2185	11	NNC	ENSMUSG00000027198.17	novel	921	5	NA	NA	0	-12504	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	131.485550536932	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACGTTATCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	93652913	93558794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93559106_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.33	chr2	-	4395	11	NNC	ENSMUSG00000027198.17	novel	921	5	NA	NA	-4	-12512	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	175.052592097347	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGGCTTTACGTTAT	NA	False	NA	NA	False	NA	NA	NA	93652902	93558802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93559106_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93626287_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.34	chr2	-	2832	9	NNC	ENSMUSG00000027198.17	novel	921	5	NA	NA	-1	12298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.079601587628	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCCAATCCTATGCAC	NA	False	NA	NA	False	NA	NA	NA	93652911	93580607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93581925_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.35	chr2	-	4907	1	Intergenic	novelGene_16265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93585543	93580636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93580600_93585500
ES.19599.4	chr2	-	2975	15	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	183.553709539509	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652900	93525975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626117_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
ES.19599.5	chr2	-	2921	15	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	188.665615006324	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTCTAGAATGCTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	93652902	93525976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526617_93533538_93533622_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650375_93650495_93651954_93652027_93652731
ES.19599.7	chr2	-	3060	16	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	164.700725222717	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTCTAGAATGCTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	93652911	93525976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93651954_93652027_93652731
ES.19599.8	chr2	-	2647	12	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	125.465875641201	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652903	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93526617_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ES.19599.9	chr2	-	2813	14	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.239649697643	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGTCTAGAATGCTG	NA	False	NA	-13	True	ATTAAA	-17	NA	93652900	93525977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93526619_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93642241_93642332_93643743_93644310_93651954_93652027_93652731
ES.196.1	chr1	-	1155	1	FSM	ENSMUSG00000100131.2	ENSMUST00000187714.2	876	1	-290	11	-290	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGTTAGCTAGAGAAAG	NA	False	NA	NA	False	TTTAAA	-18	NA	24651781	24650626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24650600_24651800
ES.196.2	chr1	-	1015	1	FSM	ENSMUSG00000100131.2	ENSMUST00000187714.2	876	1	-290	151	-290	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTCGCATCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	24651781	24650766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24650800_24651800
ES.196.3	chr1	-	701	1	FSM	ENSMUSG00000067736.3	ENSMUST00000088336.3	294	1	0	-407	0	407	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACTGAACGCCTAAA	NA	False	NA	NA	False	NA	NA	NA	24651781	24651080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24651100_24651800
ES.196.4	chr1	-	541	1	FSM	ENSMUSG00000067736.3	ENSMUST00000088336.3	294	1	0	-247	0	247	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATAATAACGTAC	NA	False	NA	NA	False	NA	NA	NA	24651781	24651240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24651200_24651800
ES.196.5	chr1	-	312	1	FSM	ENSMUSG00000067736.3	ENSMUST00000088336.3	294	1	0	-18	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAATGCTACTACCACTA	NA	False	NA	NA	False	NA	NA	NA	24651781	24651469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24651500_24651800
ES.1960.1	chr1	+	176	1	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAGAGATCTTC	NA	False	NA	NA	False	NA	NA	NA	175239670	175239846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_175239700_175239800
ES.19600.1	chr2	-	3963	1	Intergenic	novelGene_16266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	93659144	93655181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93655200_93659100
ES.19601.1	chr2	-	3223	16	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-23	199	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.95375522770359	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTATAAAAGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	93680311	93663612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664700_93665650_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ES.19601.10	chr2	-	1862	1	ISM	ENSMUSG00000040272.15	ENSMUST00000111246.8	3950	15	14155	458	3573	-458	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGGAGCCACGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	93666131	93664269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_93664300_93666100
ES.19601.11	chr2	-	1900	15	FSM	ENSMUSG00000040272.15	ENSMUST00000111246.8	3950	15	97	1953	-28	18	multi-exon	FALSE	canonical	3	8	junction_14	5.46230122694433	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTGCCTTCCTGCCTC	NA	False	NA	NA	False	AAAAAG	-18	NA	93680189	93665764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ES.19601.12	chr2	-	2004	15	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-32	9	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	5.05682000583653	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTGATGGTGCCT	NA	False	NA	NA	False	AAAAAG	-9	NA	93680320	93665773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
ES.19601.13	chr2	-	1922	14	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.52563138615225	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAACTCTTCATTCT	NA	False	NA	NA	False	NA	NA	NA	93680300	93665787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93671618_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ES.19601.14	chr2	-	3850	14	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_9	10.0200981464208	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAACTCTTCATTCT	NA	False	NA	NA	False	NA	NA	NA	93680148	93665787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93673484_93673547_93674547_93674619_93676091_93676152_93678261_93678535_93680109
ES.19601.15	chr2	-	3808	12	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-14	-15	intron_retention	FALSE	canonical	0	0	junction_3	8.71210803688068	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAGTGAAAAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	93680302	93665797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668584_93668631_93669492_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ES.19601.16	chr2	-	4441	5	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	1220	-16	intron_retention	FALSE	canonical	3	23	junction_2	2.59807621135332	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACAAGAGTGAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	93671393	93665798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93666174_93666274_93666429_93666532_93668498_93668584_93668631_93669492
ES.19601.17	chr2	-	3580	13	NNC	ENSMUSG00000040272.15	novel	2036	15	NA	NA	-16	-17	intron_retention	FALSE	canonical	0	0	junction_7	9.89212649871941	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACAAGAGTGAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	93680304	93665799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670579_93671653_93671732_93672209_93672308_93673263_93673334_93674547_93674619_93676091_93676152_93678261
ES.19601.18	chr2	-	2008	15	FSM	ENSMUSG00000040272.15	ENSMUST00000041593.15	2036	15	9	19	9	-19	multi-exon	FALSE	canonical	1	1	junction_14	6.99599010512597	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGATACAAGAGTGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93680135	93665801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678532_93679889
ES.19601.19	chr2	-	2296	12	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	6.0807241847966	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTCTCCCCAAGATGC	NA	False	NA	NA	False	AATAAA	-15	NA	93680320	93667363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678532_93680109
ES.19601.2	chr2	-	3000	16	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.72700890815241	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTGTCATTGCTATGT	NA	False	NA	NA	False	NA	NA	NA	93680303	93663811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664702_93665650_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
ES.19601.20	chr2	-	4683	3	NNC	ENSMUSG00000040272.15	novel	728	2	NA	NA	55	-63	intron_retention	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTACCT	NA	False	NA	NA	False	NA	NA	NA	93680229	93675428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93675757_93675802_93675988_93676059
ES.19601.3	chr2	-	4585	14	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	9.65683373936936	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGTCATTGCTATG	NA	False	NA	NA	False	NA	NA	NA	93680310	93663812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664702_93665650_93666174_93666274_93666429_93666532_93668498_93668584_93668631_93669492_93669583_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
ES.19601.4	chr2	-	4630	14	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	9.72400190342183	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGTCATTGCTATG	NA	False	NA	NA	False	NA	NA	NA	93680148	93663812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664700_93665650_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678353_93680109
ES.19601.5	chr2	-	2969	16	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.3383984606691	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTAGTGTCATTGCTAT	NA	False	NA	NA	False	NA	NA	NA	93680280	93663813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664708_93665659_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678532_93680109
ES.19601.6	chr2	-	2978	16	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	14	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.95375522770359	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTAGTGTCATTGCTAT	NA	False	NA	NA	False	NA	NA	NA	93680270	93663813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93664702_93665655_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ES.19601.7	chr2	-	3929	15	NNC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.96580702958922	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTAGTGTCATTGCT	NA	False	NA	NA	False	NA	NA	NA	93680289	93663815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672306_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678535_93680109
ES.19601.8	chr2	-	4214	5	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	-1301	-4	intron_retention	FALSE	canonical	0	0	junction_3	11.0989864402116	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTAGTGTCATTGCT	NA	False	NA	NA	False	NA	NA	NA	93671005	93663815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93666174_93666274_93666429_93666532_93666676_93668584_93668631_93669492
ES.19601.9	chr2	-	5655	7	NIC	ENSMUSG00000040272.15	novel	3950	15	NA	NA	1538	-5	intron_retention	FALSE	canonical	3	23	junction_3	3.64005494464026	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATTTAGTGTCATTGC	NA	False	NA	NA	False	NA	NA	NA	93674591	93663816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93666174_93666274_93666676_93668355_93668631_93669492_93669583_93670367_93671732_93672209_93673334_93674547
ES.19602.1	chr2	+	2954	1	Intergenic	novelGene_16267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAATCATGAACTTTACA	NA	False	NA	NA	False	AATAAA	-35	NA	93716565	93719519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93716600_93719500
ES.19603.1	chr2	+	2463	2	Intergenic	novelGene_16269	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAACAGATCGTATGTG	NA	False	NA	NA	False	AATAAA	-27	NA	93756693	93760571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93756773_93758187
ES.19603.2	chr2	+	5080	1	Intergenic	novelGene_16270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	93756693	93761773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93756700_93761800
ES.19604.1	chr2	-	2361	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61379	2	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGCTTTATTTCTG	NA	False	NA	2	True	AATAAA	-25	NA	93760881	93685703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ES.19604.10	chr2	-	2329	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-188	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.8157963590287	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCCAGGCCTGCTTTA	NA	False	NA	-4	True	AATAAA	-19	NA	93699690	93685709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694928_93696026_93696575_93699576
ES.19604.11	chr2	-	2561	16	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61411	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.7927841475167	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTCCAGGCCTGCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	93760913	93685710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93748319_93748495_93760610
ES.19604.12	chr2	-	2523	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-217	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.7577898608514	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTCCAGGCCTGCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	93699719	93685710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694422_93694736_93694797_93696026_93696575_93699366
ES.19604.13	chr2	-	3535	14	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61388	0	intron_retention	FALSE	canonical	3	57	junction_13	10.8316870240504	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTCCAGGCCTGCTT	NA	False	NA	-6	True	AATAAA	-17	NA	93760890	93685711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ES.19604.14	chr2	-	2170	14	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.7706704699411	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCAGCTCCAGGCCT	NA	False	NA	-10	True	AATAAA	-13	NA	93699518	93685715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93696026_93696575_93699366
ES.19604.15	chr2	-	2954	14	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-228	-4	intron_retention	FALSE	canonical	1	1	junction_11	32.4886871525983	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCAGCTCCAGGCCT	NA	False	NA	-10	True	AATAAA	-13	NA	93699730	93685715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694736_93694797_93696026_93696575_93698783
ES.19604.16	chr2	-	174	1	Intergenic	novelGene_16268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGATGGGTTTTGG	2192	False	NA	NA	False	NA	NA	NA	93742431	93742257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_93742300_93742400
ES.19604.2	chr2	-	2638	17	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61375	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.532485928859	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTGCTTTATTTCT	NA	False	NA	1	True	AATAAA	-24	NA	93760877	93685704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93686248_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93689921_93690127_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ES.19604.3	chr2	-	2275	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61328	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	23.8819375004523	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGCCTGCTTTATTTC	NA	False	NA	0	True	AATAAA	-23	NA	93760830	93685705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687163_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ES.19604.4	chr2	-	3012	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-206	0	intron_retention	FALSE	canonical	1	2	junction_14	23.4539279161056	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699708	93685706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
ES.19604.5	chr2	-	3100	16	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-218	-1	intron_retention	FALSE	canonical	1	2	junction_15	34.190057034173	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGGCCTGCTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	93699720	93685707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93686126_93686248_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
ES.19604.6	chr2	-	2457	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	-235	2	-235	-1	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGGCCTGCTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	93699737	93685707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
ES.19604.7	chr2	-	2765	17	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-217	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	37.3893680576444	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGGCCTGCTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	93699719	93685707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93686126_93686248_93686326_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783_93699033_93699366
ES.19604.8	chr2	-	4098	16	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61328	-1	intron_retention	FALSE	canonical	0	0	junction_4	37.7356889724068	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGGCCTGCTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	93760830	93685707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93686248_93686326_93687041_93687196_93687289_93687433_93687519_93687664_93688239_93688382_93688481_93688528_93689700_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
ES.19604.9	chr2	-	3537	14	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61329	-1	intron_retention	FALSE	canonical	3	57	junction_13	11.576859187148	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCAGGCCTGCTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	93760831	93685707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93696575_93760610
ES.19605.1	chr2	+	1725	1	Antisense	novelGene_ENSMUSG00000083009.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACTTCTTCTCATCCT	NA	False	NA	NA	False	AATAAA	-13	NA	93770298	93772023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_93770300_93772000
ES.19606.1	chr2	-	1370	1	FSM	ENSMUSG00000087006.4	ENSMUST00000099689.5	1386	1	21	-5	21	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCCGGGCTTTGGACT	NA	False	NA	-4	True	AATAAA	-22	NA	93787525	93786155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93786200_93787500
ES.19607.1	chr2	-	3481	9	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	71	junction_3	34.703881267086	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGAACATGTTTGTTCC	8775	False	NA	80	True	AATACA	-24	NA	93841175	93810894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.11	chr2	-	3235	8	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	2	intron_retention	FALSE	canonical	3	37	junction_3	41.0017421232666	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8871	False	NA	-5	True	ATTAAA	-22	NA	93841079	93810979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787
ES.19607.13	chr2	-	3222	8	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	7	2	intron_retention	FALSE	canonical	3	37	junction_3	43.486333766941	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8860	False	NA	-5	True	ATTAAA	-22	NA	93841090	93810979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.15	chr2	-	1309	10	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	49.5186708770752	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	8851	False	NA	-7	True	ATTAAA	-20	NA	93841099	93810981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.16	chr2	-	1367	11	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	43.1723291009415	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACAGATGATTTGATCC	8878	False	NA	-11	True	ATTAAA	-16	NA	93841072	93810985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.19	chr2	-	1050	9	NNC	ENSMUSG00000040174.15	novel	897	9	NA	NA	0	1042	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	56.9116640065989	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGCATTCTCAGTCACT	8851	False	NA	NA	False	TTTAAA	-45	NA	93841099	93825480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93825662_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.2	chr2	-	1189	9	NNC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	51.8216593231054	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAACATGTTTGTT	8876	False	NA	78	True	AATACA	-22	NA	93841074	93810896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833468_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.20	chr2	-	5090	6	NIC	ENSMUSG00000040174.15	novel	897	9	NA	NA	-4	-4421	intron_retention	FALSE	canonical	3	37	junction_5	51.0427271998666	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8871	False	NA	NA	False	NA	NA	NA	93841079	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93833502_93835077_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.21	chr2	-	4963	5	NNC	ENSMUSG00000040174.15	novel	897	9	NA	NA	0	-4421	intron_retention	FALSE	non_canonical	0	0	junction_3	64.7881161942528	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8851	False	NA	NA	False	NA	NA	NA	93841099	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93833502_93835077_93837227_93838383_93838488_93838788_93838938_93841027
ES.19607.22	chr2	-	4602	2	ISM	ENSMUSG00000040174.15	ENSMUST00000126378.8	897	9	3946	4421	-1621	-4421	intron_retention	FALSE	canonical	3	90	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	NA	False	NA	NA	False	NA	NA	NA	93837153	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_93831859_93833397
ES.19607.23	chr2	-	7677	3	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	-4421	intron_retention	FALSE	canonical	3	87	junction_2	21.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8871	False	NA	NA	False	NA	NA	NA	93841079	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93838488_93838787_93838938_93841027
ES.19607.24	chr2	-	4446	6	NNC	ENSMUSG00000040174.15	novel	825	7	NA	NA	8	-4421	intron_retention	FALSE	canonical	0	0	junction_2	62.1082925220135	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8883	False	NA	NA	False	NA	NA	NA	93841067	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93833502_93835077_93835126_93836031_93837227_93838383_93838488_93838787_93838938_93840607
ES.19607.25	chr2	-	1336	7	NNC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	-4421	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	52.8291270670514	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8871	False	NA	NA	False	NA	NA	NA	93841079	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93831859_93833397_93833502_93835077_93835123_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.26	chr2	-	3500	6	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-22	-4421	intron_retention	FALSE	canonical	3	87	junction_5	31.9462047824151	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8776	False	NA	NA	False	NA	NA	NA	93841174	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93831859_93833397_93833502_93835077_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.28	chr2	-	2950	6	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	1	-4421	intron_retention	FALSE	canonical	3	87	junction_5	27.459060435492	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGTGTAGACAAAGATATT	8799	False	NA	NA	False	NA	NA	NA	93841151	93831012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.3	chr2	-	1403	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	-90	-85	-13	-2	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAACATGTTTGTT	8785	False	NA	78	True	AATACA	-22	NA	93841165	93810896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.30	chr2	-	1452	8	NIC	ENSMUSG00000040174.15	novel	897	9	NA	NA	-4	-4454	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	44.0857235441153	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8871	False	NA	NA	False	NA	NA	NA	93841079	93831045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.31	chr2	-	2654	7	NNC	ENSMUSG00000040174.15	novel	897	9	NA	NA	-7	3573	intron_retention	FALSE	canonical	0	0	junction_2	61.2807745817017	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACGCTGGCTGATGTGT	8868	False	NA	NA	False	ATTAAA	-20	NA	93841082	93832545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93833502_93835077_93835126_93836031_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.4	chr2	-	770	4	NNC	ENSMUSG00000040174.15	novel	1395	10	NA	NA	3600	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	70.2107937254348	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAAAGCTTTTTGCCTC	NA	False	NA	5	True	ATTAAA	-32	NA	93831932	93810969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93811323_93811860_93811960_93826527_93826738_93831824
ES.19607.5	chr2	-	7843	8	NNC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	8	4	intron_retention	FALSE	canonical	1	1	junction_3	49.4912896892174	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTGATCCAAAAGCTT	8861	False	NA	-3	True	ATTAAA	-24	NA	93841089	93810977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93811323_93811860_93811960_93826527_93833528_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19607.6	chr2	-	3634	8	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-5	4	intron_retention	FALSE	canonical	3	37	junction_3	47.8535179863871	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTGATCCAAAAGCTT	8870	False	NA	-3	True	ATTAAA	-24	NA	93841080	93810977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93837227_93838383_93838488_93838787_93838938_93840607
ES.19607.8	chr2	-	1257	10	NNC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	54.1351760313996	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8871	False	NA	-5	True	ATTAAA	-22	NA	93841079	93810979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833468_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
ES.19607.9	chr2	-	954	8	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	53.9493337516312	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATTTGATCCAAAAGC	8852	False	NA	-5	True	ATTAAA	-22	NA	93841098	93810979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93811323_93811860_93811960_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ES.19608.1	chr2	+	174	1	Intergenic	novelGene_16271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGAGGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	93846819	93846993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93846800_93847000
ES.19609.1	chr2	+	271	1	Intergenic	novelGene_16272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAAGAATTCACAAT	NA	False	NA	NA	False	AATAAA	-10	NA	93973783	93974054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93973800_93974100
ES.1961.1	chr1	-	2605	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	31	0	31	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATAGACTAATTTTTAT	823	False	NA	NA	False	AATAAA	-21	NA	175453170	175427939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.10	chr1	-	5634	8	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	704	junction_4	96.3458904792773	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACCTTTTTAAAAT	825	False	NA	-22	True	AATAAA	-31	NA	175453168	175428949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_175429133_175431503_175431658_175433620_175435587_175437202_175437369_175439712_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.11	chr1	-	5601	8	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_3	312.326490606695	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACCTTTTTAAAAT	830	False	NA	-22	True	AATAAA	-31	NA	175453163	175428949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_175429133_175431503_175431658_175433620_175435587_175437230_175437369_175439712_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.13	chr1	-	3222	9	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-24	0	intron_retention	FALSE	canonical	3	704	junction_4	93.9666662971503	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACCTTTTTAAAAT	830	False	NA	-22	True	AATAAA	-31	NA	175453163	175428949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_175429133_175431503_175431658_175433620_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.14	chr1	-	10142	3	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-6527	0	intron_retention	FALSE	canonical	3	704	junction_2	172.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACCTTTTTAAAAT	NA	False	NA	-22	True	AATAAA	-31	NA	175443806	175428949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_175429133_175431503_175437369_175439712
ES.1961.18	chr1	-	1052	6	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	71	9097	9	5305	5prime_fragment	FALSE	canonical	3	704	junction_1	55.2716925740473	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGAGTTCATGTTCAT	863	False	NA	NA	False	AATAAA	-25	NA	175453130	175437036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.19	chr1	-	7938	2	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	-24	3381	intron_retention	FALSE	canonical	3	872	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACAAAAGAAAACTC	830	False	NA	NA	False	NA	NA	NA	175453163	175438960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_175446752_175453016
ES.1961.2	chr1	-	1768	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	-120	988	-120	14	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAATTTTTTAACTTAT	672	False	NA	0	True	AATAAA	-37	NA	175453321	175428927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.3	chr1	-	3953	3	FSM	ENSMUSG00000026526.15	ENSMUST00000133218.2	936	3	-3017	0	49	0	multi-exon	FALSE	canonical	3	851	junction_2	99	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	NA	False	NA	-16	True	AATAAA	-37	NA	175437230	175428943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175429133_175431503_175431658_175433620
ES.1961.5	chr1	-	1460	9	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	268.169605846748	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCTTTTTAAAATTTAA	821	False	NA	-18	True	AATAAA	-35	NA	175453172	175428945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_175429146_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.6	chr1	-	1564	10	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	278.865337651007	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACCTTTTTAAAATTT	823	False	NA	-20	True	AATAAA	-33	NA	175453170	175428947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435415_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.7	chr1	-	4004	9	NIC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	31	2	intron_retention	FALSE	canonical	3	699	junction_3	103.264148546337	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACCTTTTTAAAATTT	823	False	NA	-20	True	AATAAA	-33	NA	175453170	175428947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175442480_175444094_175444206_175446616_175446752_175453016
ES.1961.9	chr1	-	1448	9	NNC	ENSMUSG00000026526.15	novel	2636	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	295.104218878687	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACCTTTTTAAAAT	803	False	NA	-22	True	AATAAA	-31	NA	175453190	175428949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439902_175444090_175444206_175446616_175446752_175453016
ES.19610.1	chr2	+	2317	1	Intergenic	novelGene_16273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACCCCAAACAATTGA	NA	False	NA	NA	False	NA	NA	NA	93984251	93986568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_93984300_93986600
ES.19611.1	chr2	-	5947	4	ISM	ENSMUSG00000027195.11	ENSMUST00000146580.2	668	8	16641	-828	16346	-5	3prime_fragment	FALSE	canonical	3	719	junction_2	30.3900568534439	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGTATTTTTGATAG	NA	False	NA	NA	False	AATAAA	-26	NA	93880468	93863038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705
ES.19611.10	chr2	-	2398	5	ISM	ENSMUSG00000027195.11	ENSMUST00000146580.2	668	8	13370	-819	13075	-1	3prime_fragment	FALSE	canonical	3	692	junction_4	37.49249924985	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGAAATGAAAGTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	93883739	93863047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598
ES.19611.12	chr2	-	1438	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	76	388	5	-375	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAATTGAAACATG	NA	False	NA	NA	False	NA	NA	NA	93988233	93863421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ES.19611.13	chr2	-	1278	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	73	551	2	282	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGTGCATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	93988236	93863584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ES.19611.2	chr2	-	3417	1	NIC	ENSMUSG00000027195.11	novel	1330	6	NA	NA	30359	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGTATTTTTGATAG	2912	False	NA	NA	False	AATAAA	-26	NA	93866455	93863038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_93863000_93866500
ES.19611.3	chr2	-	1790	10	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	231.040694400653	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGTGTATTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	93988218	93863041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882666_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ES.19611.4	chr2	-	2076	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	-182	8	-182	5	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGTGTATTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	93988491	93863041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ES.19611.6	chr2	-	1790	11	NNC	ENSMUSG00000027195.11	novel	1902	11	NA	NA	27	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	219.055335474852	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGTGTATTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	93988211	93863041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_93863997_93864267_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ES.19612.1	chr2	+	221	1	Intergenic	novelGene_16274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTACTTTACATGTTT	NA	False	NA	NA	False	NA	NA	NA	94042085	94042306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_94042100_94042300
ES.19613.1	chr2	+	177	1	Intergenic	novelGene_16276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTAAGTG	NA	False	NA	NA	False	NA	NA	NA	94184638	94184815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_94184600_94184800
ES.19614.1	chr2	+	1770	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	266	4	266	-4	multi-exon	FALSE	canonical	3	34	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTCAAGAATCCTAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	94236761	94242023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_94237312_94240803
ES.19614.2	chr2	+	6125	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	574	-4659	574	4659	multi-exon	FALSE	canonical	3	34	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTCCCCCCTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	94237069	94246686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_94237312_94240803
ES.19614.3	chr2	+	6349	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	601	-4910	601	4910	multi-exon	FALSE	canonical	3	34	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTACTGGCATACAAACT	NA	False	NA	NA	False	ATTAAA	-16	NA	94237096	94246937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_94237312_94240803
ES.19614.4	chr2	+	549	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	605	886	605	-886	multi-exon	FALSE	canonical	3	34	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTTTTTTTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	94237100	94241141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_94237312_94240803
ES.19615.1	chr2	+	3908	1	Antisense	novelGene_ENSMUSG00000027193.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTAAAATGGCATCATAA	NA	False	NA	NA	False	NA	NA	NA	94254610	94258518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_94254600_94258500
ES.19616.1	chr2	-	4597	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	-5	-2	-5	2	multi-exon	TRUE	canonical	3	116	junction_1	40.2833497103814	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGTGTAGTTTTTCTT	NA	False	NA	0	True	AATAAA	-23	NA	94237039	94131109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.10	chr2	-	4481	24	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.0437102328263	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237019	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194844_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.11	chr2	-	4580	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.7345710121938	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237028	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135403_94153429_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.12	chr2	-	4576	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0229985746811	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237028	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133895_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.13	chr2	-	4418	24	FSM	ENSMUSG00000027194.17	ENSMUST00000111237.9	4409	24	-11	2	-1	-2	multi-exon	FALSE	canonical	2	4	junction_8	56.2706462844556	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237035	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.15	chr2	-	4597	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	6	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	55.6364064459794	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237018	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205028_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.16	chr2	-	5898	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_14	66.484125089294	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237019	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94197154_94197291_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.17	chr2	-	7231	24	NIC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	0	-2	intron_retention	FALSE	canonical	3	116	junction_1	40.843099664082	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCGTGGTGTAGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	94237033	94131113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.18	chr2	-	4559	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.6596646045311	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTCCGTGGTGTAG	NA	False	NA	-8	True	AATAAA	-15	NA	94237015	94131117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172977_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.2	chr2	-	7420	24	NIC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	17	1	intron_retention	FALSE	canonical	3	95	junction_5	42.5036415653271	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTGGTGTAGTTTTTCT	NA	False	NA	-1	True	AATAAA	-22	NA	94237007	94131110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94154867_94157042_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.22	chr2	-	4449	24	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	68.1186000098122	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTCCGTGGTGTAG	NA	False	NA	-8	True	AATAAA	-15	NA	94237020	94131117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194844_94195006_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.23	chr2	-	4707	26	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	63.3889580289817	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTCCGTGGTGTAG	NA	False	NA	-8	True	AATAAA	-15	NA	94237020	94131117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94235234_94235372_94236851
ES.19616.24	chr2	-	4420	24	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	66.9117580462457	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCATTCCGTGGTGTA	NA	False	NA	-9	True	AATAAA	-14	NA	94237028	94131118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205586_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.25	chr2	-	4562	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.9783564325435	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAATCATTCCGTGGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	94237017	94131119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173146_94189101_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.29	chr2	-	3830	1	Intergenic	novelGene_16275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGAAAGGAAAAGAAAAGAA	8677	False	NA	NA	False	NA	NA	NA	94147514	94143684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_94143700_94147500
ES.19616.30	chr2	-	3529	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	-2	-119	-1	119	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGTACCTCAAATGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	94237035	94158162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.32	chr2	-	3842	19	NIC	ENSMUSG00000027194.17	novel	3408	20	NA	NA	4	23	intron_retention	FALSE	canonical	3	95	junction_1	35.5136906308289	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCTTTATTGTTTAATG	NA	False	NA	NA	False	TATAAA	-7	NA	94237020	94158258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.33	chr2	-	3426	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	-1	-17	0	17	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTGATCTTTATTGT	NA	False	NA	NA	False	TATAAA	-1	NA	94237034	94158264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.34	chr2	-	3312	19	NNC	ENSMUSG00000027194.17	novel	3408	20	NA	NA	3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.0851290016008	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAAAAGAAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	94237021	94158273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194844_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.35	chr2	-	3436	20	NNC	ENSMUSG00000027194.17	novel	3408	20	NA	NA	4	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	57.8371962861118	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAAAAGAAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	94237029	94158273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205027_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.36	chr2	-	2387	2	ISM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	12	56028	3	-5277	5prime_fragment	FALSE	canonical	3	261	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATCCAAAATTTTAAGG	NA	False	NA	NA	False	AATAAA	-30	NA	94237021	94214309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_94216527_94236851
ES.19616.5	chr2	-	4612	25	NNC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	55.6364064459794	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94237020	94131111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205039_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19616.6	chr2	-	5765	24	NIC	ENSMUSG00000027194.17	novel	4590	25	NA	NA	4	0	intron_retention	FALSE	canonical	3	116	junction_1	39.7784507211749	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94237020	94131111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ES.19617.1	chr2	-	3825	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	45	129	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	211.688282609319	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAGCATCAGGAGAG	NA	False	NA	NA	False	AATACA	-26	NA	94268436	94241897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.12	chr2	-	2257	1	NIC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	18004	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	1309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	9181	False	NA	-2	True	AATAAA	-18	NA	94244329	94242072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94242100_94244300
ES.19617.13	chr2	-	5213	13	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	21	-46	intron_retention	FALSE	canonical	3	565	junction_1	216.754261139711	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268460	94242072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94260186_94268268
ES.19617.17	chr2	-	3676	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	2	-46	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	367.343300730687	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268479	94242072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257911_94258390_94258485_94260023_94260186_94268268
ES.19617.20	chr2	-	3614	13	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-9	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	397.631529601632	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268490	94242072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.21	chr2	-	4207	13	NIC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-6	-47	intron_retention	FALSE	canonical	3	777	junction_1	160.571613479953	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGTCTTAATGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	94268487	94242073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.23	chr2	-	3190	10	NIC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	25	-47	combination_of_known_splicesites	FALSE	canonical	1	9	junction_9	418.756566191379	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGTCTTAATGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	94268456	94242073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94268268
ES.19617.24	chr2	-	3661	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	21	-47	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_13	356.208801209588	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGTCTTAATGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	94268460	94242073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260179_94268268
ES.19617.25	chr2	-	3686	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	2	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	387.446442185407	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGTCTTAATGTGT	NA	False	NA	-3	True	AATAAA	-17	NA	94268479	94242073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251336_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.27	chr2	-	3717	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-6	-48	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	367.37857552051	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTGTCTTAATGTG	NA	False	NA	-4	True	AATAAA	-16	NA	94268487	94242074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260000_94260186_94268268
ES.19617.28	chr2	-	3694	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	13	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	388.227332291869	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTGTCTTAATGTG	NA	False	NA	-4	True	AATAAA	-16	NA	94268468	94242074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258499_94260023_94260186_94268268
ES.19617.29	chr2	-	2077	2	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	6288	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTGTGTCTTAATG	8927	False	NA	-6	True	AATAAA	-45	NA	94256045	94242076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244044_94255935
ES.19617.3	chr2	-	3777	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-29	-44	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	347.427111252326	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCTTAATGTGTTAT	NA	False	NA	0	True	AATAAA	-20	NA	94268510	94242070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248549_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.36	chr2	-	3557	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-5	-52	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	359.69999004759	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTGTGTCTTAA	NA	False	NA	-8	True	AATAAA	-43	NA	94268486	94242078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94256067_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.37	chr2	-	3620	13	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	12	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	398.680601763143	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTGTGTCTTAA	NA	False	NA	-8	True	AATAAA	-43	NA	94268469	94242078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.4	chr2	-	3757	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-65	44	-65	-44	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCTTAATGTGTTAT	NA	False	NA	0	True	AATAAA	-20	NA	94268546	94242070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.40	chr2	-	2462	15	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-18	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	354.865453088799	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTGTGTCTTAA	NA	False	NA	-8	True	AATAAA	-43	NA	94268499	94242078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94242698_94243937_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.41	chr2	-	3607	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	12	-53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	379.401631036473	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTTTTGTGTCTTA	NA	False	NA	-9	True	AATAAA	-42	NA	94268469	94242079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255441_94256021_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.42	chr2	-	4579	12	NIC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	6	-53	intron_retention	FALSE	canonical	3	777	junction_1	164.318477303896	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTTTTGTGTCTTA	NA	False	NA	-9	True	AATAAA	-42	NA	94268475	94242079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251872_94252641_94252824_94253756_94253847_94255318_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.44	chr2	-	2434	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	30	1272	30	-1272	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGCGATTATCCCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	94268451	94243298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.47	chr2	-	1955	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	-29	1810	-29	-1810	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGACTTGTTTTCACA	NA	False	NA	5	True	NA	NA	NA	94268510	94243836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.48	chr2	-	1742	13	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	14	-1823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	393.966466071529	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGTCTGCAGCCTTG	NA	False	NA	-8	True	NA	NA	NA	94268467	94243849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94268268
ES.19617.49	chr2	-	1830	13	NIC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-7	-1823	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	377.397300231761	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTGTCTGCAGCCTTG	NA	False	NA	-8	True	NA	NA	NA	94268488	94243849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.5	chr2	-	3696	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	1	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	366.041078303948	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCTTAATGTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	94268480	94242071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244127_94248600_94248744_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.7	chr2	-	4102	13	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-16	-45	intron_retention	FALSE	canonical	3	565	junction_1	217.956927447196	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCTTAATGTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	94268497	94242071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244132_94248600_94248738_94249215_94249293_94251330_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19617.8	chr2	-	3706	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	-18	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.552199332862	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTAATGTGTT	NA	False	NA	-2	True	AATAAA	-18	NA	94268499	94242072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_94244125_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ES.19618.1	chr2	+	6625	1	Intergenic	novelGene_16277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGATTTGCTTTGTATG	NA	False	NA	NA	False	AAAAAG	-17	NA	95816899	95823524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_95816900_95823500
ES.19619.1	chr2	+	180	1	Intergenic	novelGene_16278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	95859294	95859474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_95859300_95859500
ES.1962.1	chr1	-	3266	5	NNC	ENSMUSG00000026525.10	novel	1913	4	NA	NA	130	1551	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.33012701892219	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAGAGATAACTAAA	NA	False	NA	NA	False	NA	NA	NA	175520212	175488435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_175488632_175488699_175490721_175491092_175491345_175492875_175493196_175519735
ES.1962.2	chr1	-	1772	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	132	9	132	-9	multi-exon	FALSE	canonical	3	10	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAAAGGCTGTTGTCA	NA	False	NA	NA	False	AATAAA	-21	NA	175520210	175489995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
ES.1962.3	chr1	-	5434	1	Genic_Genomic	ENSMUSG00000078185.4	novel	NA	NA	NA	NA	2021	1338	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCCAGTCCCTTATCCAC	NA	False	NA	NA	False	NA	NA	NA	175513898	175508464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_175508500_175513900
ES.1962.4	chr1	-	6980	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-57	-18	-57	18	multi-exon	FALSE	canonical	3	18	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTAATATCTTGGA	NA	False	NA	21	True	AATAAA	-35	NA	175520253	175509784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175516247_175519735
ES.1962.5	chr1	-	6416	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-27	516	-27	-516	multi-exon	FALSE	canonical	3	18	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTGAGTTCCTACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	175520223	175510318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175516247_175519735
ES.1962.6	chr1	-	5080	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	-28	1853	-28	-1853	multi-exon	FALSE	canonical	3	18	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGTAAATATATTTTAT	NA	False	NA	NA	False	AATAAA	-28	NA	175520224	175511655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_175516247_175519735
ES.19620.1	chr2	-	203	1	Intergenic	novelGene_16279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGAATGTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	98234216	98234013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_98234000_98234200
ES.19621.1	chr2	-	202	1	Intergenic	novelGene_16280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTTTATTAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	98848444	98848242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_98848200_98848400
ES.19622.1	chr2	+	5529	3	Intergenic	novelGene_16281	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCTGTAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	98882135	98887753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_98883491_98883526_98887478_98887530
ES.19623.1	chr2	-	176	1	Intergenic	novelGene_16282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGTTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	99055736	99055560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_99055600_99055700
ES.19624.1	chr2	+	158	1	Intergenic	novelGene_16283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAATAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99504828	99504986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_99504800_99505000
ES.19625.1	chr2	+	213	1	Intergenic	novelGene_16284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAATGCATCATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99828847	99829060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_99828800_99829100
ES.19625.2	chr2	+	156	2	Intergenic	novelGene_16285	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCGTTT	NA	False	NA	NA	False	NA	NA	NA	99828850	99855678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_99828994_99855665
ES.19625.3	chr2	+	179	1	Intergenic	novelGene_16286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	99855519	99855698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_99855500_99855700
ES.19626.1	chr2	-	7074	1	Intergenic	novelGene_16288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTAGTCGGCCATCA	NA	False	NA	NA	False	NA	NA	NA	100377841	100370767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_100370800_100377800
ES.19626.2	chr2	-	6663	2	Intergenic	novelGene_16287	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTAGTCGGCCATCA	NA	False	NA	NA	False	NA	NA	NA	100377636	100370767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_100377001_100377206
ES.19627.1	chr2	+	3317	2	Intergenic	novelGene_16289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTAATTGTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	100926077	100929576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_100928865_100929046
ES.19628.1	chr2	-	2289	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-16	0	3	0	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATACACTTCTCCTTATT	NA	False	NA	NA	False	NA	NA	NA	101459351	101391125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
ES.19628.2	chr2	-	998	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-39	1314	-20	29	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTCACTGTTGTT	NA	False	NA	9	True	AATAAA	-44	NA	101459374	101392439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
ES.19628.3	chr2	-	833	7	NNC	ENSMUSG00000027165.17	novel	2273	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	56.1201587865022	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTCTGTGGAAATGTA	NA	False	NA	-20	True	AATAAA	-15	NA	101459344	101392468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416709_101440868_101441021_101459225
ES.19628.5	chr2	-	1824	2	FSM	ENSMUSG00000027165.17	ENSMUST00000177007.2	1458	2	-20	-346	-20	346	multi-exon	FALSE	canonical	3	166	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAGGAAAATAC	NA	False	NA	NA	False	NA	NA	NA	101459374	101439345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101441021_101459225
ES.19628.6	chr2	-	2630	1	NIC	ENSMUSG00000027165.17	novel	2273	7	NA	NA	-1107	313	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCCAAAAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	101442008	101439378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_101439400_101442000
ES.19629.1	chr2	-	269	1	Intergenic	novelGene_16290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTTATTAAGAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	101499954	101499685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_101499700_101500000
ES.1963.1	chr1	+	2935	9	NNC	ENSMUSG00000026523.15	novel	1392	10	NA	NA	13381	1788	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1.98431348329844	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCAGTCCAGTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	175539733	175573240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175539959_175544844_175544948_175547843_175547948_175552232_175552263_175553954_175554066_175556348_175556564_175559047_175559183_175571111_175571192_175571308
ES.1963.2	chr1	+	3562	14	NNC	ENSMUSG00000026523.15	novel	2161	16	NA	NA	13473	33623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.235440802234	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATCTGTGTGTGACTGC	NA	False	NA	NA	False	NA	NA	NA	175539825	175605075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175539959_175544844_175544948_175547843_175547948_175552232_175552263_175553954_175554066_175556348_175556564_175559047_175559183_175571111_175571192_175583089_175583230_175591507_175591635_175594571_175594721_175597071_175597196_175599738_175599915_175603140
ES.1963.3	chr1	+	3674	15	NNC	ENSMUSG00000026523.15	novel	2161	16	NA	NA	13483	33813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8.14692880658668	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGCACTGTGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	175539835	175605265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175539959_175544844_175544948_175547843_175547948_175552232_175552263_175553954_175554066_175556348_175556564_175559047_175559183_175571111_175571192_175583089_175583230_175591507_175591635_175594571_175594721_175597071_175597196_175599738_175599915_175603140_175604664_175604731
ES.1963.4	chr1	+	2847	5	ISM	ENSMUSG00000026523.15	ENSMUST00000194087.6	3225	27	65225	37451	-3026	34029	internal_fragment	FALSE	canonical	2	15	junction_2	2.91547594742265	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTTTCCTTTTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	175591577	175605481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_175591635_175594571_175594721_175597071_175597196_175599738_175599915_175603140
ES.19630.1	chr2	+	2461	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-27	3735	-16	-3735	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGTTACCGCTCTGGT	NA	False	NA	NA	False	ATTAAA	-35	NA	101508757	101528279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.10	chr2	+	677	1	NIC	ENSMUSG00000027164.9	novel	1949	2	NA	NA	3	-7127	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	101508776	101509453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508800_101509500
ES.19630.11	chr2	+	5842	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	3	-132	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGATATTTTATTGTAA	NA	False	NA	NA	False	ATTAAA	-34	NA	101508776	101531882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.12	chr2	+	6029	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-5	145	-5	-145	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTTGGAAACTTGTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	101508779	101531869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.13	chr2	+	5972	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTATGTAGAATGTTA	NA	False	NA	NA	False	TATAAA	-18	NA	101508782	101532018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.14	chr2	+	7704	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-2	-1533	-2	1533	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTAGTGTTACTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	101508782	101533547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.15	chr2	+	6843	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	-1	876	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATGCAGTGGTCAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	101508783	101532890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.16	chr2	+	3940	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	8	2221	8	-2221	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTCCGTTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	101508792	101529793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.17	chr2	+	3605	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	9	-2352	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCTGTGTCTATATT	NA	False	NA	NA	False	AATAAA	-32	NA	101508793	101529662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.18	chr2	+	3800	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	10	2359	10	-2359	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGCAGTAGCTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	101508794	101529655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.19	chr2	+	3666	6	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	10	-3731	intron_retention	FALSE	canonical	3	43	junction_1	25.8348601699332	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTACCGCTCTGGTGTTG	NA	False	NA	NA	False	ATTAAA	-39	NA	101508794	101528283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.2	chr2	+	3157	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-27	3039	-16	-3039	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTGGAACTTGGGAA	NA	False	NA	NA	False	AATAAA	-27	NA	101508757	101528975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.20	chr2	+	5157	7	NNC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	10	-703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5585995813465	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGAGTTGTAGT	NA	False	NA	NA	False	TTTAAA	-39	NA	101508794	101531311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_101508966_101514823_101515046_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.3	chr2	+	5300	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	-16	-693	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTAGTTTTTCACATT	NA	False	NA	NA	False	NA	NA	NA	101508757	101531321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.4	chr2	+	2981	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-27	3215	-16	-3215	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGAATTGGCTCAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	101508757	101528799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.5	chr2	+	5559	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-27	637	-16	-637	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTCAGCGGAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	101508757	101531377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.6	chr2	+	2901	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	-10	-3086	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAACAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	101508763	101528928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.7	chr2	+	2250	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	1	-3726	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTCTGGTGTTGAGTTC	NA	False	NA	NA	False	ATTAAA	-44	NA	101508774	101528288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.8	chr2	+	6184	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	-10	-5	1	5	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTATGTAGAATGTTAC	NA	False	NA	NA	False	TATAAA	-19	NA	101508774	101532019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ES.19630.9	chr2	+	4583	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	1	-3037	intron_retention	FALSE	canonical	3	72	junction_2	14.1617638574987	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGGAACTTGGGAAAT	NA	False	NA	NA	False	AATAAA	-29	NA	101508774	101528977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101520560_101521772_101521845_101524599_101524678_101527007
ES.19631.1	chr2	+	173	1	Intergenic	novelGene_16291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAGATTAAATA	NA	False	NA	NA	False	NA	NA	NA	101643787	101643960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_101643800_101644000
ES.19632.1	chr2	-	4374	9	FSM	ENSMUSG00000032841.16	ENSMUST00000171088.8	4296	9	11	-89	11	89	multi-exon	TRUE	canonical	0	0	junction_8	2.72717802865893	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCACACTGTCTGTGTG	989	False	NA	NA	False	AGTAAA	-30	NA	101628041	101544540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627765
ES.19632.2	chr2	-	4203	9	FSM	ENSMUSG00000032841.16	ENSMUST00000043845.14	2290	9	45	-1958	-13	2	multi-exon	FALSE	canonical	1	4	junction_4	1.6583123951777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTGCTGTACAGAATGC	1022	False	NA	NA	False	AATAAA	-17	NA	101628008	101544627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627816
ES.19632.3	chr2	-	4229	10	NNC	ENSMUSG00000032841.16	novel	4159	10	NA	NA	7476	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.43187671366233	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTGCTGCTGTACAGAA	NA	False	NA	NA	False	AATAAA	-14	NA	101661849	101544630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_101547812_101559768_101559896_101565027_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101658146_101658216_101661619
ES.19632.4	chr2	-	3006	9	NNC	ENSMUSG00000032841.16	novel	4296	9	NA	NA	-8806	799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.72717802865893	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGTGTTAACATGAGAAG	NA	False	NA	NA	False	NA	NA	NA	101653484	101545786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101653330
ES.19632.5	chr2	-	3034	9	FSM	ENSMUSG00000032841.16	ENSMUST00000043845.14	2290	9	44	-788	-14	788	multi-exon	FALSE	canonical	1	4	junction_4	1.6583123951777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGTGTT	1021	False	NA	NA	False	NA	NA	NA	101628009	101545797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627816
ES.19632.6	chr2	-	3087	9	FSM	ENSMUSG00000032841.16	ENSMUST00000171088.8	4296	9	41	1168	-16	788	multi-exon	FALSE	canonical	0	0	junction_8	2.72717802865893	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGTGTT	1019	False	NA	NA	False	NA	NA	NA	101628011	101545797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627765
ES.19632.7	chr2	-	2310	9	FSM	ENSMUSG00000032841.16	ENSMUST00000171088.8	4296	9	-14	2000	12	-44	multi-exon	FALSE	canonical	0	0	junction_8	2.72717802865893	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTTTG	964	False	NA	NA	False	TATAAA	-14	NA	101628066	101546629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101547812_101559768_101559896_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474_101602754_101627765
ES.19633.1	chr2	+	1226	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	-36	1	-30	-1	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGCTGGTCGTGGTTCT	NA	False	NA	28	True	AATAAA	-24	NA	101716561	101731990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ES.19633.2	chr2	+	5626	3	NIC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	183	junction_2	3	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGATGCTGGTCGTGG	NA	False	NA	24	True	AATAAA	-20	NA	101716590	101731986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101716665_101725479_101730318_101731272
ES.19633.3	chr2	+	4889	3	NIC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	176	junction_2	6.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGATGCTGGTCGTGGT	NA	False	NA	25	True	AATAAA	-21	NA	101716595	101731987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_101716665_101725479_101727525_101729212
ES.19633.4	chr2	+	2133	5	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	8	5	1	-5	intron_retention	FALSE	canonical	3	160	junction_2	10.2713192920871	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGATGCTGGTCGTGG	NA	False	NA	24	True	AATAAA	-20	NA	101716605	101731986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213
ES.19633.5	chr2	+	520	2	NNC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	14723	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGATGCTGGTCGTGG	NA	False	NA	24	True	AATAAA	-20	NA	101731330	101731986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_101731439_101731574
ES.19634.1	chr2	-	3905	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	45	-117	18	117	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATATATTGGTGAAAG	NA	False	NA	NA	False	AATAAA	-28	NA	102016685	101780430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ES.19634.10	chr2	-	173	1	Intergenic	novelGene_16292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAAAGCATGTACCAG	NA	False	NA	NA	False	NA	NA	NA	101859040	101858867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_101858900_101859000
ES.19634.11	chr2	-	8133	1	Antisense	novelGene_ENSMUSG00000085417.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGCATAAGGCCAGAT	9684	False	NA	NA	False	NA	NA	NA	101873349	101865216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_101865200_101873300
ES.19634.12	chr2	-	2176	1	Intergenic	novelGene_16293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGTGCTCCCCAGCTC	NA	False	NA	NA	False	NA	NA	NA	101936960	101934784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_101934800_101937000
ES.19634.2	chr2	-	3859	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	-24	-2	-24	2	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTGTGAATGGTTCTTA	NA	False	NA	0	True	AATAAA	-20	NA	102016754	101780545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ES.19634.4	chr2	-	5478	5	NIC	ENSMUSG00000048058.18	novel	3833	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	53	junction_3	6.79613860953409	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016722	101780547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ES.19634.5	chr2	-	3712	6	FSM	ENSMUSG00000048058.18	ENSMUST00000111222.2	3710	6	-7	5	-7	-5	multi-exon	FALSE	canonical	2	7	junction_4	25.560907652116	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGTCGTGTGAATG	NA	False	NA	-7	True	AATAAA	-13	NA	102016710	101780552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943973_101944025_102016624
ES.19634.6	chr2	-	3424	3	NNC	ENSMUSG00000048058.18	novel	3710	6	NA	NA	135244	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTGTCGTGTGAAT	NA	False	NA	-8	True	AATAAA	-12	NA	101833220	101780553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_101783521_101785173_101785520_101833109
ES.19634.7	chr2	-	3676	6	NNC	ENSMUSG00000048058.18	novel	3710	6	NA	NA	20	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.2565782966318	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTCTGTCGTGTGA	NA	False	NA	-10	True	AATAAA	-10	NA	102016683	101780555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_101783521_101785173_101785514_101888251_101888387_101900277_101900404_101943973_101944025_102016624
ES.19634.8	chr2	-	3712	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	12	109	12	-109	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTGTATGTGGTTGCT	NA	False	NA	-37	True	AATAAA	-32	NA	102016718	101780656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ES.19634.9	chr2	-	3597	6	FSM	ENSMUSG00000048058.18	ENSMUST00000111222.2	3710	6	-12	125	-12	-125	multi-exon	FALSE	canonical	2	7	junction_4	25.560907652116	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTATATAAACTGGAAG	NA	False	NA	-53	True	AATAAA	-16	NA	102016715	101780672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943973_101944025_102016624
ES.19635.1	chr2	+	180	1	Intergenic	novelGene_16294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	102031507	102031687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_102031500_102031700
ES.19635.2	chr2	+	205	2	Antisense	novelGene_ENSMUSG00000083306.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGCAAACCTCTGTTT	NA	False	NA	NA	False	AAAACA	-6	NA	102031508	102209107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_102031666_102209059
ES.19635.3	chr2	+	6399	1	Intergenic	novelGene_16295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAGGAAAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	102162388	102168787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_102162400_102168800
ES.19636.1	chr2	+	1077	1	Intergenic	novelGene_16296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAAGACCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102214871	102215948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_102214900_102215900
ES.19637.1	chr2	-	5955	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-339	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGTTGTTCACAAAGGA	NA	False	NA	8	True	AATAAA	-27	NA	102231584	102130455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.10	chr2	-	3201	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-11	1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAAGCTTGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	102231256	102132881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.11	chr2	-	2863	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-304	1326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTGTAAGTGGACAG	NA	False	NA	NA	False	ACTAAA	-22	NA	102231549	102133512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.12	chr2	-	2244	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-243	768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAATTCTTCGGCCAGC	NA	False	NA	NA	False	GATAAA	-2	NA	102231488	102134070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.13	chr2	-	816	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-47	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTGACTGTGTGCTTC	NA	False	NA	NA	False	NA	NA	NA	102230649	102134653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187751_102188002_102211208_102211287_102230357
ES.19637.14	chr2	-	2138	3	ISM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-36	56402	-36	922	5prime_fragment	FALSE	canonical	3	89	junction_2	2.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTACTTGAGCATGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	102231281	102186865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_102188002_102211208_102211287_102230357
ES.19637.2	chr2	-	5620	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-12	4	-12	-4	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGTCTCTCAGAGTT	NA	False	NA	-4	True	AATAAA	-15	NA	102231257	102130467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
ES.19637.3	chr2	-	5634	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-36	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGTCTCTCAGAGTT	NA	False	NA	-4	True	AATAAA	-15	NA	102231281	102130467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187751_102188002_102211208_102211287_102230357
ES.19637.5	chr2	-	3592	5	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-206	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.7841402671274	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCATTTGTCTCTCAG	NA	False	NA	-8	True	AATAAA	-11	NA	102231451	102130471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102132408_102134621_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.6	chr2	-	4439	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-11	-1180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGGAGTGTGTGTGT	NA	False	NA	NA	False	AATACA	-20	NA	102231256	102131643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.7	chr2	-	4315	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-37	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAGTTGGAGGTAATGG	NA	False	NA	NA	False	AATAAA	-26	NA	102231282	102131793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19637.8	chr2	-	3680	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-15	1947	-15	-1947	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTCAGTGTGAGTTAAGA	NA	False	NA	NA	False	NA	NA	NA	102231260	102132410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
ES.19637.9	chr2	-	3624	4	NNC	ENSMUSG00000027189.17	novel	5612	5	NA	NA	-263	2128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1817862838798	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTCTCTTTAAATTAC	NA	False	NA	NA	False	TATAAA	-20	NA	102231508	102132710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102134850_102187745_102188002_102211208_102211287_102230357
ES.19638.1	chr2	-	2493	1	FSM	ENSMUSG00000075012.5	ENSMUST00000099678.5	3134	1	639	2	639	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGAGGTTTGATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	102282205	102279712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102279700_102282200
ES.19639.1	chr2	+	175	1	Intergenic	novelGene_16297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTG	3641	False	NA	NA	False	NA	NA	NA	102291027	102291202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_102291000_102291200
ES.1964.1	chr1	+	3273	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-58	10	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGACAAATCTTCTGAC	9495	False	NA	27	True	AATAAA	-35	NA	175708088	175736320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.10	chr1	+	2749	14	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	169.975285359772	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAATGCTAATTGGA	9763	False	NA	14	True	AATAAA	-22	NA	175708356	175736307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708794_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723689_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.11	chr1	+	7742	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTGTATCTTTTTAT	9763	False	NA	NA	False	NA	NA	NA	175708356	175741057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.12	chr1	+	2746	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-1	10	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_7	147.894836465176	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGACAAATCTTCTGAC	9765	False	NA	27	True	AATAAA	-35	NA	175708358	175736320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723697_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.13	chr1	+	3869	14	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	5	intron_retention	FALSE	canonical	1	2	junction_8	126.32853758468	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9766	False	NA	10	True	AATAAA	-18	NA	175708359	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175721606_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.14	chr1	+	2624	9	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	3038	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	77.9068955548865	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGACTTTTTTTTTTTT	9766	False	NA	NA	False	NA	NA	NA	175708359	175722687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306
ES.1964.15	chr1	+	2885	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	119.362956172015	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9766	False	NA	10	True	AATAAA	-18	NA	175708359	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721252_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.16	chr1	+	4655	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	5	intron_retention	FALSE	canonical	3	16	junction_14	111.616988137184	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9766	False	NA	10	True	AATAAA	-18	NA	175708359	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175734171
ES.1964.17	chr1	+	3042	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	119.25722499826	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAATGCTAATTGGACA	9766	False	NA	16	True	AATAAA	-24	NA	175708359	175736309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721606_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.18	chr1	+	7243	13	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	5	intron_retention	FALSE	non_canonical	0	0	junction_8	128.498378718696	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9767	False	NA	10	True	AATAAA	-18	NA	175708360	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175724496_175726089_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.19	chr1	+	5272	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	175	junction_2	75.7744238751405	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9767	False	NA	5	True	AATAAA	-13	NA	175708360	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.2	chr1	+	3113	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	-56	4739	-56	6	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATTGGACAAATCTTC	9497	False	NA	23	True	AATAAA	-31	NA	175708090	175736316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.20	chr1	+	2579	14	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	-27	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	149.178539630841	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAAGAATAAATCTGT	9767	False	NA	-22	True	NA	NA	NA	175708360	175736271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.21	chr1	+	2887	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.139181231236	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9767	False	NA	10	True	AATAAA	-18	NA	175708360	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714352_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.22	chr1	+	2597	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	122.651234986799	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCTGGGAAGTTTAAA	9767	False	NA	3	True	AATAAA	-11	NA	175708360	175736296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.23	chr1	+	4591	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	119.685216382008	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGAAGTTTAAATGCTA	9767	False	NA	8	True	AATAAA	-16	NA	175708360	175736301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175721930_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.24	chr1	+	2719	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	120.175148539665	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGAAGTTTAAATGCTA	9767	False	NA	8	True	AATAAA	-16	NA	175708360	175736301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719604_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.26	chr1	+	5865	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	5	intron_retention	FALSE	canonical	3	208	junction_2	68.579932200256	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9767	False	NA	10	True	AATAAA	-18	NA	175708360	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.28	chr1	+	4950	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	214	2632	1	2113	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGTTTCCCAGGTGTC	9767	False	NA	NA	False	ATTAAA	-25	NA	175708360	175738423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.29	chr1	+	4886	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	1897	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTGTAATCCCAGCC	9769	False	NA	NA	False	NA	NA	NA	175708362	175738207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.3	chr1	+	3082	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	120.381346723873	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9549	False	NA	10	True	AATAAA	-18	NA	175708142	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.30	chr1	+	2887	16	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	138.419876543155	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAATGCTAATTGGA	9769	False	NA	14	True	AATAAA	-22	NA	175708362	175736307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175734171_175734227_175735995
ES.1964.31	chr1	+	5485	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	216	2095	1	-2095	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTCCCTTATTGCCT	9769	False	NA	NA	False	ATTAAA	-13	NA	175708362	175738960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.33	chr1	+	2777	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	119.685216382008	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9770	False	NA	5	True	AATAAA	-13	NA	175708363	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721356_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.34	chr1	+	9072	12	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	175	junction_2	81.5278687838076	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9770	False	NA	5	True	AATAAA	-13	NA	175708363	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.35	chr1	+	5583	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	-1810	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	116.353788428365	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCTCTTTTTAAGAT	9770	False	NA	NA	False	NA	NA	NA	175708363	175739245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.36	chr1	+	5536	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	-2098	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	121.367631767355	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTGTGTCCCTTATTG	9770	False	NA	NA	False	ATTAAA	-10	NA	175708363	175738957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.37	chr1	+	2645	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	116.353788428365	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAATGCTAATTGGA	9770	False	NA	14	True	AATAAA	-22	NA	175708363	175736307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.38	chr1	+	2801	14	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	123.980767739318	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9770	False	NA	5	True	AATAAA	-13	NA	175708363	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721606_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.39	chr1	+	7580	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	217	-1	2	1	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACTTGTATCTTTTTA	9770	False	NA	NA	False	NA	NA	NA	175708363	175741056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.4	chr1	+	2561	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	147.594400784234	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTTTAAATGCTAATTG	9753	False	NA	12	True	AATAAA	-20	NA	175708346	175736305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.40	chr1	+	8743	9	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	7	810	intron_retention	FALSE	canonical	3	175	junction_2	80.3881210129954	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	9775	False	NA	NA	False	NA	NA	NA	175708368	175729294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175727199_175728445
ES.1964.41	chr1	+	4975	14	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-2	5	intron_retention	FALSE	canonical	1	1	junction_8	152.496580619343	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9783	False	NA	10	True	AATAAA	-18	NA	175708376	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721252_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.42	chr1	+	2889	14	ISM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	425	4757	-177	0	3prime_fragment	FALSE	canonical	3	208	junction_1	67.3070329638035	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9978	False	NA	5	True	AATAAA	-13	NA	175708571	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.43	chr1	+	2613	13	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	119.024157211887	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCTGGGAAGTTTAAA	NA	False	NA	3	True	AATAAA	-11	NA	175708725	175736296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.44	chr1	+	159	1	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	175713636	175713795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_175713600_175713800
ES.1964.45	chr1	+	1927	8	ISM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	12291	4757	-10	0	3prime_fragment	FALSE	canonical	3	310	junction_4	55.874860178796	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	NA	False	NA	5	True	AATAAA	-13	NA	175720437	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.46	chr1	+	1850	7	NNC	ENSMUSG00000039748.12	novel	739	5	NA	NA	459	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.166581545773	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	NA	False	NA	5	True	AATAAA	-13	NA	175720906	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175721114_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.6	chr1	+	2705	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	149.889415018853	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGGAAGTTTAAATGC	9757	False	NA	6	True	AATAAA	-14	NA	175708350	175736299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.1964.7	chr1	+	3011	16	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	145.896980396747	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGGGAAGTTTAAATG	9760	False	NA	5	True	AATAAA	-13	NA	175708353	175736298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175729380_175729560_175731901_175732004_175733361_175733556_175735995
ES.1964.8	chr1	+	2892	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	121.367631767355	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGTTTAAATGCTAAT	9760	False	NA	10	True	AATAAA	-18	NA	175708353	175736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ES.19640.1	chr2	-	176	1	Intergenic	novelGene_16298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACCACTATATTCTGG	NA	False	NA	NA	False	NA	NA	NA	102293035	102292859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_102292900_102293000
ES.19641.1	chr2	-	2812	1	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	87430	243	87151	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGGTCTCTGGTGTGAA	NA	False	NA	NA	False	ATTAAA	-19	NA	102644540	102641728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_102641700_102644500
ES.19641.2	chr2	-	2838	9	FSM	ENSMUSG00000005087.18	ENSMUST00000099673.9	2848	9	-2	12	-2	-12	multi-exon	FALSE	canonical	0	0	junction_3	0.85695682505013	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCCAATAAAAACAAACAAAA	7990	False	NA	NA	False	ACTAAA	-26	NA	102731857	102642903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ES.19642.1	chr2	-	2545	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	-34	-5	-34	5	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGACATGCAAAATAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	102903892	102851414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19642.10	chr2	-	5339	11	NNC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-33	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	142.441040434279	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCCTTAATCATATTGA	NA	False	NA	76	True	ATTAAA	-14	NA	102903891	102852060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102860944_102863656_102864681_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19642.11	chr2	-	4805	11	NNC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-25	-720	intron_retention	FALSE	canonical	3	3	junction_10	137.776667110219	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTATGTTTGGTTCAT	NA	False	NA	-3	True	ATTAAA	-13	NA	102903883	102852139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102900535_102900704_102903634
ES.19642.12	chr2	-	5440	4	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38494	721	38316	-721	intron_retention	FALSE	canonical	3	314	junction_1	17.5689119374726	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCCTATGTTTGGTTCA	18	True	NA	-4	True	ATTAAA	-12	NA	102865364	102852140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622
ES.19642.13	chr2	-	1738	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	6	762	6	-762	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGGTGCTGTACAGA	NA	False	NA	0	True	AATAAA	-29	NA	102903852	102852181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19642.14	chr2	-	1671	11	NNC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	-10	-779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	106.82134618137	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCAGATCCACTTTTAAC	NA	False	NA	-17	True	AATAAA	-12	NA	102903817	102852198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877152_102888841_102888923_102903634
ES.19642.15	chr2	-	1104	5	FSM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	-12	986	-12	-986	multi-exon	FALSE	canonical	3	362	junction_1	7.44983221287567	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTGCGCTTGCGTAA	NA	False	NA	NA	False	NA	NA	NA	102903819	102870949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19642.16	chr2	-	5429	4	NIC	ENSMUSG00000010914.11	novel	2078	5	NA	NA	-10	-986	intron_retention	FALSE	canonical	3	362	junction_1	7.93025150224688	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTGCGCTTGCGTAA	NA	False	NA	NA	False	NA	NA	NA	102903817	102870949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_102871487_102872538_102877167_102888841_102888923_102903634
ES.19642.2	chr2	-	2372	10	NIC	ENSMUSG00000010914.11	novel	2506	11	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	106.464391543213	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATATGACATGCAAAATAG	NA	False	NA	NA	False	AATAAA	-18	NA	102903802	102851416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102903634
ES.19642.3	chr2	-	4882	4	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	39776	-3	39598	3	intron_retention	FALSE	canonical	3	314	junction_1	17.5689119374726	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATATGACATGCAAAATAG	4625	False	NA	NA	False	AATAAA	-18	NA	102864082	102851416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622
ES.19642.6	chr2	-	2403	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	2	101	2	-101	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTTGTATTGTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	102903856	102851520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19642.8	chr2	-	586	1	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	51401	452	51223	-452	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTGTCTTAGCTA	9245	False	NA	NA	False	ATTAAA	-14	NA	102852457	102851871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_102851900_102852500
ES.19642.9	chr2	-	1940	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	-60	626	-60	-626	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACGTTATAACTGGGCT	NA	False	NA	91	True	ATTAAA	-29	NA	102903918	102852045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ES.19643.1	chr2	+	1398	5	ISM	ENSMUSG00000010911.13	ENSMUST00000124540.8	837	6	-6	-7	-6	0	intron_retention	FALSE	canonical	3	22	junction_2	158.882031709064	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4607	False	NA	19	True	AATAAA	-41	NA	102904033	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_102904187_102913299_102913401_102918905_102919024_102919747_102919884_102922093
ES.19643.10	chr2	+	646	5	ISM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	13437	6	4155	0	3prime_fragment	FALSE	canonical	3	304	junction_4	23.054283766797	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	NA	False	NA	19	True	AATAAA	-41	NA	102917456	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ES.19643.2	chr2	+	855	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	133.735331490556	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4612	False	NA	19	True	AATAAA	-41	NA	102904038	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922223_102922809
ES.19643.3	chr2	+	898	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	20	1	0	-1	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGAAATTTTCTTGATG	4613	False	NA	24	True	AATAAA	-20	NA	102904039	102922988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ES.19643.4	chr2	+	919	8	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	167.882368925145	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4624	False	NA	19	True	AATAAA	-41	NA	102904050	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922650_102922688_102922809
ES.19643.5	chr2	+	902	7	NIC	ENSMUSG00000010911.13	novel	919	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	139.148202367915	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4627	False	NA	19	True	AATAAA	-41	NA	102904053	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922786
ES.19643.6	chr2	+	3690	5	NIC	ENSMUSG00000010911.13	novel	919	7	NA	NA	19	0	intron_retention	FALSE	canonical	2	2	junction_4	165.7549018883	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4632	False	NA	19	True	AATAAA	-41	NA	102904058	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919082_102919747
ES.19643.7	chr2	+	1041	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	55	-16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	138.582606732912	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAACTCAGCTGCT	4668	False	NA	-4	True	AATAAA	-18	NA	102904094	102922960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_102904187_102913299_102913627_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ES.19643.8	chr2	+	1118	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	172.108170120486	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	4672	False	NA	19	True	AATAAA	-41	NA	102904098	102922983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_102904187_102913299_102913627_102917457_102917507_102918905_102919082_102919747_102919884_102922093_102922262_102922809
ES.19644.1	chr2	-	217	1	Intergenic	novelGene_16299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGCTGTATATATTT	8872	False	NA	NA	False	NA	NA	NA	102914861	102914644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_102914600_102914900
ES.19645.1	chr2	+	180	1	Intergenic	novelGene_16300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATGTTAGGCA	NA	False	NA	NA	False	NA	NA	NA	103128693	103128873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103128700_103128900
ES.19646.1	chr2	-	4767	10	NNC	ENSMUSG00000012350.16	novel	4469	9	NA	NA	-7502	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.31468439624436	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGGAGATGTGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	103141125	103093785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103097217_103097311_103097508_103098502_103098566_103104229_103104299_103104402_103104468_103107116_103107180_103109862_103110109_103113865_103113966_103140247_103140379_103140722
ES.19646.2	chr2	-	1687	10	NNC	ENSMUSG00000012350.16	novel	4469	9	NA	NA	-7509	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.15470053837925	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTATGTGATTGTG	NA	False	NA	NA	False	NA	NA	NA	103141132	103096876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103097217_103097311_103097508_103098502_103098566_103104229_103104299_103104398_103104468_103107116_103107180_103109862_103110109_103113865_103113966_103140247_103140379_103140722
ES.19647.1	chr2	-	2494	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	-26	145	-26	-145	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCTTTCAGCTCTG	NA	False	NA	0	True	AATAAA	-24	NA	103315531	103284338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ES.19647.11	chr2	-	3374	10	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	18	-6533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.391879315395	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTTTTAATCTCA	NA	False	NA	NA	False	AATAAA	-37	NA	103315452	103291472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103293192_103293240_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ES.19647.2	chr2	-	2515	14	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	23	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	213.242146438624	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTTTGGTTGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	103315447	103284346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103305515_103305629_103307093_103307266_103315317
ES.19647.3	chr2	-	5035	3	NIC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	22549	-153	intron_retention	FALSE	canonical	3	595	junction_1	7	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCGTGTTTGGTTGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	103292921	103284346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103285167_103285422_103287303_103290586
ES.19647.4	chr2	-	2494	14	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	9	-155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	242.173760299325	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCGTGTTTGGTTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	103315461	103284348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300753_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103313419_103313517_103315317
ES.19647.5	chr2	-	3127	4	ISM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	22802	155	22767	-155	3prime_fragment	FALSE	canonical	3	550	junction_2	25.1705295048705	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCGTGTTTGGTTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	103292703	103284348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586
ES.19647.6	chr2	-	2287	12	NIC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	9	-156	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	168.997090297217	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGACCGTGTTTGGTTGC	NA	False	NA	-11	True	AATAAA	-13	NA	103315461	103284349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ES.19647.7	chr2	-	2388	13	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	9	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	167.66739148286	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGACCGTGTTTGGTTG	NA	False	NA	-12	True	AATAAA	-12	NA	103315461	103284350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302192_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ES.19647.8	chr2	-	2384	13	NNC	ENSMUSG00000027187.11	novel	2613	13	NA	NA	29	-157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	167.693669131147	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGACCGTGTTTGGTTG	NA	False	NA	-12	True	AATAAA	-12	NA	103315441	103284350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103285167_103285422_103285507_103287202_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ES.19648.1	chr2	-	180	1	Intergenic	novelGene_16301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAATCTTTTGCATT	NA	False	NA	NA	False	NA	NA	NA	103354781	103354601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103354600_103354800
ES.19649.1	chr2	+	4589	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	-28	-3	-28	3	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATCTGCTCCTGGTAA	NA	False	NA	5	True	AATAAA	-19	NA	103396626	103548771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
ES.19649.2	chr2	+	4613	18	NNC	ENSMUSG00000032724.6	novel	4558	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.47379599632828	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGGCATCTGCTCCT	NA	False	NA	0	True	AATAAA	-14	NA	103396657	103548766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103397955_103509089_103509237_103513622_103513837_103527101_103527162_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
ES.19649.3	chr2	+	4201	17	NNC	ENSMUSG00000032724.6	novel	4558	17	NA	NA	353	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.50816155808814	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGGCATCTGCTCCTG	NA	False	NA	1	True	AATAAA	-15	NA	103397007	103548767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536072_103537918_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
ES.19649.4	chr2	+	6671	1	Intergenic	novelGene_16303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAGTAAAT	400	False	NA	NA	False	NA	NA	NA	103424527	103431198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103424500_103431200
ES.19649.5	chr2	+	178	1	Intergenic	novelGene_16304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8329	False	NA	NA	False	NA	NA	NA	103447720	103447898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103447700_103447900
ES.19649.6	chr2	+	4997	1	Intergenic	novelGene_16305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCTGAAGCCTTCAGGA	NA	False	NA	NA	False	AAAAAG	-10	NA	103518051	103523048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103518100_103523000
ES.1965.1	chr1	+	2885	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTCACAAAGAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	176029034	176031919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_176029000_176031900
ES.19650.1	chr2	+	207	1	Intergenic	novelGene_16306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGGAAGTGTGAGAAGG	5104	False	NA	NA	False	NA	NA	NA	103611538	103611745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103611500_103611700
ES.19651.1	chr2	-	1776	1	Intergenic	novelGene_16302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	103404243	103402467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103402500_103404200
ES.19652.1	chr2	-	3619	31	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-2	7463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1336320404761	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCGCTTCCCATGGGTG	NA	False	NA	NA	False	NA	NA	NA	103591544	103544137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103544463_103548917_103548967_103552163_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.10	chr2	-	3850	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	70.4852984381734	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591567	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562414_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.100	chr2	-	4037	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	493.127872630854	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627949	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613373_103613487_103613551_103627075_103627286_103627807
ES.19652.101	chr2	-	3768	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-47	5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	613.511151971788	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627365	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.102	chr2	-	4086	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-59	5	intron_retention	FALSE	canonical	3	1559	junction_1	115.391571805527	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627377	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.103	chr2	-	4079	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103628003	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.104	chr2	-	3916	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-37	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	452.395775528754	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627355	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605825_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.105	chr2	-	6304	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-25	5	intron_retention	FALSE	canonical	3	28	junction_15	607.244413184469	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627343	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075
ES.19652.107	chr2	-	3788	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	18	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	451.889351677122	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627300	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606018_103606322_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.108	chr2	-	3911	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-9	5	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	502.37788200933	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103628003	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.109	chr2	-	3889	19	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	29	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	439.650650453794	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627420	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103596022_103596177_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.11	chr2	-	1383	4	NNC	ENSMUSG00000027185.16	novel	4543	27	NA	NA	-1661	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.464788531365	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103556435	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555635_103556008
ES.19652.110	chr2	-	5735	9	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	1283	5	intron_retention	FALSE	canonical	3	1559	junction_1	130.02253410467	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103608430	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103605871_103605954_103606503_103608307
ES.19652.111	chr2	-	4077	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	24	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	493.53252985461	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627970	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605757_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.112	chr2	-	3992	20	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	480.546532116387	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103628001	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103595986_103596097_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.113	chr2	-	4038	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	507.645375227254	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627988	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603435_103605757_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.114	chr2	-	4081	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	483.610444188704	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627966	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.115	chr2	-	3977	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-49	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	445.057944985216	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627367	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598800_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.118	chr2	-	3846	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-49	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	586.49616893279	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103626938	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103626858
ES.19652.12	chr2	-	6720	24	NIC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	0	-2	intron_retention	FALSE	canonical	3	271	junction_20	30.6904786870715	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591542	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103562393_103562498_103562601_103563263_103563381_103564088_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.122	chr2	-	3784	19	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-18	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	439.650650453794	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627336	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627117_103627293
ES.19652.123	chr2	-	3778	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-47	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	450.678688509693	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103626936	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103626858
ES.19652.125	chr2	-	3867	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-16	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	450.678688509693	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103626905	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103626738
ES.19652.126	chr2	-	7667	17	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	6	5	intron_retention	FALSE	canonical	3	28	junction_14	625.936997628356	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627988	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.127	chr2	-	4190	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-7	5	intron_retention	FALSE	canonical	3	761	junction_17	280.240850441286	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103628001	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.128	chr2	-	4383	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	24	5	intron_retention	FALSE	canonical	3	1559	junction_1	119.170554642286	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGTGGTTATGGTAC	NA	False	NA	-6	True	AATAAA	-22	NA	103627425	103595357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.13	chr2	-	4426	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_28	92.9674825200858	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591565	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103588472_103588523_103591393
ES.19652.131	chr2	-	5642	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-4	4	intron_retention	FALSE	canonical	3	761	junction_17	279.160307903274	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103627998	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.132	chr2	-	3960	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-29	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	450.131776168885	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103627347	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598761_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.133	chr2	-	4160	20	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	591.915642151669	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103627992	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.135	chr2	-	4080	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	496.726752981987	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103628004	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609620_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.136	chr2	-	4099	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	488.541344270604	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103628004	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609585_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.137	chr2	-	4028	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	29	4	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	450.133851680881	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103627420	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604125_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.14	chr2	-	4381	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	16	-2	intron_retention	FALSE	canonical	3	271	junction_24	30.0777228218975	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591570	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.140	chr2	-	3973	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-47	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	448.352864000487	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTGGTTATGGTA	NA	False	NA	-7	True	AATAAA	-21	NA	103627365	103595358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609524_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.143	chr2	-	4057	19	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-31	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	592.244589946576	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGTGTGGTTATGGT	NA	False	NA	-8	True	AATAAA	-20	NA	103627349	103595359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103610897_103610983_103613300_103613388_103613487_103613551_103627075
ES.19652.145	chr2	-	4122	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	448.319198569756	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGTGTGGTTATGGT	NA	False	NA	-8	True	AATAAA	-20	NA	103627491	103595359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609669_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.147	chr2	-	3978	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	491.669717504659	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGTGTGGTTATGGT	NA	False	NA	-8	True	AATAAA	-20	NA	103627925	103595359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608355_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.15	chr2	-	5234	26	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	271	junction_22	28.9385555962975	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591565	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.152	chr2	-	3957	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_10	495.819806257088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627946	103595362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.155	chr2	-	5805	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-63	-1	intron_retention	FALSE	canonical	3	1559	junction_1	130.361981013446	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTCATGTGTGGTTA	NA	False	NA	-12	True	AATAAA	-16	NA	103627381	103595363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.156	chr2	-	2681	19	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	584.003659827024	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTCATGTGTGGTTA	NA	False	NA	-12	True	AATAAA	-16	NA	103627364	103595363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103595665_103596978_103597209_103598750_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.157	chr2	-	3723	18	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	326	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	450.678688509693	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTCTCATGTGTGGT	NA	False	NA	-14	True	AATAAA	-14	NA	103626563	103595365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103626532
ES.19652.158	chr2	-	3869	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-54	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	610.551274976148	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTCTCATGTGTGGT	NA	False	NA	-14	True	AATAAA	-14	NA	103627372	103595365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103599176_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.16	chr2	-	4751	26	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_21	96.293335179544	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591553	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.160	chr2	-	3878	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	6	2285	6	-208	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTTTTTTTTTTTTTC	NA	False	NA	-6	True	ATTAAA	-21	NA	103627988	103595570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.161	chr2	-	3778	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	53	-211	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	440.218520760725	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAACTTTTTTTTTTTTT	NA	False	NA	-9	True	ATTAAA	-18	NA	103627396	103595573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.165	chr2	-	3603	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	53	-218	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	460.85663697483	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTGTAAACTTTTTT	NA	False	NA	-16	True	ATTAAA	-11	NA	103627396	103595580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.166	chr2	-	4358	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	24	-218	intron_retention	FALSE	canonical	3	1559	junction_1	130.5272361425	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTTGTAAACTTTTTT	NA	False	NA	-16	True	ATTAAA	-11	NA	103627425	103595580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.168	chr2	-	4860	14	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-116	-219	intron_retention	FALSE	canonical	3	1559	junction_1	136.689342420545	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTTTGTAAACTTTTT	NA	False	NA	-17	True	ATTAAA	-10	NA	103609829	103595581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677
ES.19652.17	chr2	-	4571	20	NNC	ENSMUSG00000027185.16	novel	4080	27	NA	NA	-4926	-2	intron_retention	FALSE	canonical	0	0	junction_13	81.4732082129438	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103578628	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565112_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530
ES.19652.170	chr2	-	1918	7	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-230	-639	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	657.424182362921	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTGAAACACTGGTGT	2510	False	NA	NA	False	AATAAA	-19	NA	103603356	103596001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318
ES.19652.171	chr2	-	3462	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-10	2717	-10	-640	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCTTGAAACACTGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	103628004	103596002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.173	chr2	-	3484	20	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-18	-642	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	591.915642151669	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATCTTGAAACACTGG	NA	False	NA	NA	False	AATAAA	-16	NA	103627962	103596004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.174	chr2	-	3357	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-4	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	491.104424288313	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATCTTGAAACACTGG	NA	False	NA	NA	False	AATAAA	-16	NA	103627948	103596004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613530_103627101_103627286_103627807
ES.19652.175	chr2	-	3431	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-8	-642	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATCTTGAAACACTGG	NA	False	NA	NA	False	AATAAA	-16	NA	103628002	103596004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.176	chr2	-	3236	20	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	28	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	480.546532116387	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATCTTGAAACACTGG	NA	False	NA	NA	False	AATAAA	-16	NA	103627916	103596004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627109_103627244_103627286_103627807
ES.19652.179	chr2	-	3594	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	517	-646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	450.678688509693	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTATCTTGAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	103626372	103596008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103625827
ES.19652.181	chr2	-	3384	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	23	-646	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	450.133851680881	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTATCTTGAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	103627426	103596008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604125_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.182	chr2	-	4587	13	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	16994	646	-742	-646	intron_retention	FALSE	canonical	3	1559	junction_1	133.549902242154	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTATCTTGAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	103610455	103596008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307
ES.19652.186	chr2	-	3195	19	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-61	-646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	439.650650453794	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTATCTTGAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	103627379	103596008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627124_103627281
ES.19652.187	chr2	-	3386	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-6	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	493.127872630854	2084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTGTATCTTGAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	103627950	103596009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613373_103613487_103613551_103627075_103627286_103627807
ES.19652.189	chr2	-	3267	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	46	2856	-4	-779	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTACCACCCTTTTAA	NA	False	NA	NA	False	AAAAAG	-13	NA	103627948	103596141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.19	chr2	-	2292	16	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.0252622321115	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103564799	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561861_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719
ES.19652.190	chr2	-	3260	19	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	29	-846	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	573.651507859202	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACTTTTGGTCACATGT	NA	False	NA	NA	False	NA	NA	NA	103627420	103596208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075
ES.19652.191	chr2	-	3174	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-4	2999	-4	-922	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGGATCTTGCTGTA	NA	False	NA	41	True	NA	NA	NA	103627998	103596284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.193	chr2	-	5214	16	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-15	-969	intron_retention	FALSE	canonical	3	1559	junction_1	129.229614768958	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTCCTGTTTGTCATT	NA	False	NA	-6	True	NA	NA	NA	103627293	103596331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.194	chr2	-	3024	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-8	-1000	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	466.318589961573	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTTCTCTGAACAATG	NA	False	NA	-37	True	NA	NA	NA	103627457	103596362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603435_103605757_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.195	chr2	-	2947	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-4	3226	-4	940	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAGTGGATACTGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	103627998	103596511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.196	chr2	-	2856	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	54	938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	452.239257496252	2059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGTAGTGGATACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	103627395	103596513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613380_103613487_103613551_103627075
ES.19652.198	chr2	-	2790	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	45	3334	-5	832	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCATGGGTCCTTACTC	NA	False	NA	NA	False	ATTAAA	-33	NA	103627949	103596619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.2	chr2	-	4331	28	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-18	33	intron_retention	FALSE	canonical	1	5	junction_3	69.8087334024852	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAATGTGGCTTTACCT	NA	False	NA	24	True	TATAAA	-13	NA	103591567	103551567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103555898_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.20	chr2	-	5209	26	NIC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	0	-2	intron_retention	FALSE	canonical	3	271	junction_22	30.1469998507314	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591542	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103564186_103564719_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.200	chr2	-	2572	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-4	3601	-4	565	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTTGCTTAGGAGTAAAA	NA	False	NA	76	True	AATACA	-16	NA	103627998	103596886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.201	chr2	-	6137	16	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	23	492	intron_retention	FALSE	canonical	3	1559	junction_1	128.215894317185	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTATTCTGCATGTT	NA	False	NA	3	True	NA	NA	NA	103627426	103596959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.202	chr2	-	2348	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-47	479	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	440.218520760725	2034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGAAGGAAACTATTTT	NA	False	NA	-10	True	CATAAA	-36	NA	103627365	103596972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.203	chr2	-	2335	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	76	3758	26	408	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTATTGTAAAGGGACT	NA	False	NA	-81	True	NA	NA	NA	103627918	103597043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.206	chr2	-	3465	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_8	451.433273031574	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627419	103597451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.207	chr2	-	3555	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-10	4166	-10	0	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103628004	103597451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.208	chr2	-	3515	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	734.456840945111	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627986	103597451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605774_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609582_103609669_103609917_103613300_103613381_103613487_103613551_103627075_103627286_103627807
ES.19652.211	chr2	-	5698	15	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-37	0	intron_retention	FALSE	canonical	3	1726	junction_3	105.601001077506	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627355	103597451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.212	chr2	-	3299	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	457.53522746888	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627238	103597451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598803_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.213	chr2	-	1854	6	NNC	ENSMUSG00000027184.15	novel	555	4	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	741.251212477929	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	NA	False	NA	-11	True	NA	NA	NA	103627949	103597453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598691_103609801_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.214	chr2	-	3540	19	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_16	608.074295432254	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGAGTACTGGTGGA	NA	False	NA	-11	True	NA	NA	NA	103627925	103597453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.217	chr2	-	3474	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	463.88630072465	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103627420	103597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613373_103613487_103613551_103627075
ES.19652.218	chr2	-	3533	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_7	504.894521171156	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103628002	103597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604125_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.219	chr2	-	3420	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-48	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	608.564486619947	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103627366	103597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.22	chr2	-	3769	29	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	69.4678019675596	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591559	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.221	chr2	-	3311	16	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	479.192079326118	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103627304	103597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.222	chr2	-	3372	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	462.898190075312	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAGTACTGGTG	NA	False	NA	-13	True	NA	NA	NA	103627309	103597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608313_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.223	chr2	-	3568	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_16	699.528873644061	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	NA	False	NA	-15	True	NA	NA	NA	103627984	103597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.225	chr2	-	3385	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-25	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	720.668883842232	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	NA	False	NA	-15	True	NA	NA	NA	103627969	103597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
ES.19652.226	chr2	-	3543	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	496.870176523344	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	NA	False	NA	-15	True	NA	NA	NA	103627986	103597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.227	chr2	-	3345	16	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-47	-6	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	468.967300447365	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	NA	False	NA	-15	True	NA	NA	NA	103627365	103597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.228	chr2	-	3266	17	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	28	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	516.939457135698	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGAATGAGTACTGG	NA	False	NA	-15	True	NA	NA	NA	103627916	103597457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.229	chr2	-	3277	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-32	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	463.580612596127	2017	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGAATGAATGAGTACT	NA	False	NA	-17	True	NA	NA	NA	103627350	103597459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606017_103606322_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.230	chr2	-	3560	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	693.572158538927	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGAATGAATGAGTACT	NA	False	NA	-17	True	NA	NA	NA	103627417	103597459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075
ES.19652.231	chr2	-	2240	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	9	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	463.981882728194	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCATCTTGAATCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	103627309	103598597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605757_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.232	chr2	-	3605	1	Intergenic	novelGene_16307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACAAAAATAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	103622695	103619090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103619100_103622700
ES.19652.233	chr2	-	4470	2	NNC	ENSMUSG00000027184.15	novel	626	2	NA	NA	16	-5836	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAATAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	103627302	103619099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103621684_103625416
ES.19652.234	chr2	-	4197	2	FSM	ENSMUSG00000027184.15	ENSMUST00000146527.2	626	2	-60	-3511	-10	3511	multi-exon	FALSE	canonical	3	761	junction_1	0	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAATTTAATAGATAAA	NA	False	NA	NA	False	AATAAA	-12	NA	103628004	103623285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103627286_103627807
ES.19652.24	chr2	-	5004	26	NIC	ENSMUSG00000027185.16	novel	4543	27	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	271	junction_22	28.9385555962975	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591544	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.25	chr2	-	5575	25	NIC	ENSMUSG00000027185.16	novel	4543	27	NA	NA	7	-2	intron_retention	FALSE	canonical	3	271	junction_21	30.8097883075421	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591533	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.26	chr2	-	3655	27	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_26	71.9134506104263	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591608	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103591393
ES.19652.27	chr2	-	3893	29	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-106	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	68.8429149497282	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591377	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591139
ES.19652.28	chr2	-	3225	25	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	4302	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	75.6817165649817	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103584459	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403
ES.19652.29	chr2	-	3877	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	70.8644869465946	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103591622	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588133_103591393
ES.19652.3	chr2	-	3920	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	-10	-31	-10	31	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTAATGTGGCTTTAC	NA	False	NA	22	True	TATAAA	-11	NA	103591625	103551569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.30	chr2	-	4689	27	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-5	1	intron_retention	FALSE	canonical	3	271	junction_23	30.6475719860327	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103591554	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.31	chr2	-	4970	29	NNC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_23	107.270828337647	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103591542	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556924_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582098_103582570_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.32	chr2	-	4292	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	6	1	intron_retention	FALSE	canonical	2	8	junction_15	70.6705100282595	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103591534	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.33	chr2	-	3706	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	70.8703873065624	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103591565	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.34	chr2	-	9055	29	Fusion	ENSMUSG00000027184.15_ENSMUSG00000027185.16	novel	3879	29	NA	NA	-2258	1	multi-exon	FALSE	canonical	2	9	junction_28	69.3471285252236	534	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103593873	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103588472
ES.19652.36	chr2	-	3504	17	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	231	1	intron_retention	FALSE	canonical	3	322	junction_10	23.1840462387393	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGCCTGCAGTGCCTA	NA	False	NA	-12	True	AATAAA	-17	NA	103573471	103551603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103565336_103570097_103570235_103573388
ES.19652.38	chr2	-	4292	28	NNC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_20	93.9655980009799	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591542	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574758_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.39	chr2	-	3819	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	70.8370777321641	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591565	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578426_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.4	chr2	-	3718	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	14	combination_of_known_splicesites	FALSE	canonical	1	7	junction_16	70.8017189192497	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAATCGGTTATAACA	NA	False	NA	5	True	AATAAA	-34	NA	103591565	103551586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.40	chr2	-	3763	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.0867215493867	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591509	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103555898_103555992_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.41	chr2	-	3818	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.8436046974645	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591565	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552267_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.42	chr2	-	4554	27	FSM	ENSMUSG00000027185.16	ENSMUST00000133016.8	4543	27	-11	0	9	0	multi-exon	FALSE	canonical	3	271	junction_23	29.6333611774729	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591597	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.43	chr2	-	3839	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.1444118972293	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591565	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555522_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.46	chr2	-	4260	29	NNC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_23	91.2214450708622	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591543	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582469_103582570_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.47	chr2	-	4785	27	NIC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	-4	0	intron_retention	FALSE	canonical	3	271	junction_23	29.6333611774729	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591619	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.48	chr2	-	4741	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-18	0	intron_retention	FALSE	canonical	3	271	junction_24	29.6853642470513	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591567	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.5	chr2	-	4246	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	271	junction_24	29.0992813585317	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591627	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.50	chr2	-	3908	30	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	91.6140641057575	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591344	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103588472_103588523_103591139
ES.19652.53	chr2	-	3449	22	NNC	ENSMUSG00000027185.16	novel	4080	27	NA	NA	-4912	0	intron_retention	FALSE	canonical	0	0	junction_8	78.6878214378209	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103578614	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560684_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530
ES.19652.55	chr2	-	3755	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	94.2547771213962	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591509	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563377_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584566_103587513_103587606_103588015_103588139_103591393
ES.19652.56	chr2	-	4985	27	NIC	ENSMUSG00000027185.16	novel	4107	28	NA	NA	-16	0	intron_retention	FALSE	canonical	2	8	junction_14	71.9760500107357	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591565	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.57	chr2	-	6977	23	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	12	0	intron_retention	FALSE	canonical	3	271	junction_19	31.9435517102868	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591574	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103557234_103558147_103558259_103558344_103558442_103560592_103562393_103562498_103562601_103563263_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.58	chr2	-	3710	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	72.0726656632212	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591567	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.59	chr2	-	6198	24	NIC	ENSMUSG00000027185.16	novel	4543	27	NA	NA	12	0	intron_retention	FALSE	canonical	3	271	junction_20	29.7861311785537	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCCTGCAGTGCCT	NA	False	NA	-13	True	AATAAA	-16	NA	103591528	103551604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.6	chr2	-	5057	27	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	3	-2	intron_retention	FALSE	canonical	3	271	junction_23	30.2468150800247	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591583	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.60	chr2	-	7786	24	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	271	junction_20	30.5693917614565	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTTGCCTGCAGTGCC	NA	False	NA	-14	True	AATAAA	-15	NA	103591594	103551605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.61	chr2	-	3447	23	ISM	ENSMUSG00000027185.16	ENSMUST00000143017.8	4107	28	10914	1	-6926	-1	3prime_fragment	FALSE	canonical	2	8	junction_15	75.4289113083109	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTTGCCTGCAGTGCC	NA	False	NA	-14	True	AATAAA	-15	NA	103580628	103551605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565262_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566
ES.19652.62	chr2	-	3787	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	70.8550906960892	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATTTGCCTGCAGTGCC	NA	False	NA	-14	True	AATAAA	-15	NA	103591534	103551605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570229_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.67	chr2	-	4159	29	NNC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	69.1439178637646	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCATTTGCCTGCAGT	NA	False	NA	-17	True	AATAAA	-12	NA	103591564	103551608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556924_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.68	chr2	-	4595	3	FSM	ENSMUSG00000027185.16	ENSMUST00000165970.2	432	3	-57	-4106	9	27	multi-exon	FALSE	canonical	3	327	junction_2	5	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCCAGAAAAGGCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	103591597	103583337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103587606_103588015_103588139_103591393
ES.19652.69	chr2	-	4965	2	NIC	ENSMUSG00000027185.16	novel	1639	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	327	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103591584	103583364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103588139_103591393
ES.19652.7	chr2	-	4720	27	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	271	junction_23	29.6454392952089	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591567	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.70	chr2	-	6144	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	25	0	-25	0	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCAGTGTTTAGAACAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	103627969	103593285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.72	chr2	-	5976	19	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	18	-87	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	573.651507859202	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGGTGTGTATTGTT	NA	False	NA	NA	False	NA	NA	NA	103627300	103593372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075
ES.19652.73	chr2	-	5854	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	90	-1875	-41	-202	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGACTCCTGTTTTG	NA	False	NA	NA	False	GATAAA	-19	NA	103627359	103593487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.74	chr2	-	5662	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-11	518	-11	-518	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTGTAAGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	103628005	103593803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.75	chr2	-	5626	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-6	-522	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	2092	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATTTATTTGTAAGTC	NA	False	NA	NA	False	NA	NA	NA	103628000	103593807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.78	chr2	-	5399	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-1	771	-1	-771	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGTTTATAGCAAAGCC	NA	False	NA	NA	False	ATTAAA	-14	NA	103627995	103594056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.79	chr2	-	4994	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-10	1185	-10	892	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTCTATATGTATT	NA	False	NA	0	True	ATTAAA	-44	NA	103628004	103594470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.81	chr2	-	4846	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-62	892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	439.650650453794	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTCTATATGTATT	NA	False	NA	0	True	ATTAAA	-44	NA	103627380	103594470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627193_103627238
ES.19652.82	chr2	-	4724	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-2	877	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	443.013336829713	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTCTATAGTTCTTTT	NA	False	NA	-15	True	ATTAAA	-29	NA	103627215	103594485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.83	chr2	-	4907	18	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	2	870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	507.645375227254	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAATTAACTTCTATAG	NA	False	NA	-22	True	ATTAAA	-22	NA	103627992	103594492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603435_103605757_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.84	chr2	-	4879	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	-3	861	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGATTGTAGTAAATTAA	NA	False	NA	-31	True	ATTAAA	-13	NA	103627947	103594501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.86	chr2	-	4235	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	7	227	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGCAAAATTGAAGAA	NA	False	NA	NA	False	AATATA	-14	NA	103627937	103595135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.87	chr2	-	5695	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-32	183	intron_retention	FALSE	canonical	3	1726	junction_3	108.266742354243	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGATGGTGTGTTACGTG	NA	False	NA	NA	False	GATAAA	-25	NA	103627350	103595179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.89	chr2	-	4279	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-9	1899	-9	178	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTAGATGGTGTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	103628003	103595184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.9	chr2	-	4685	27	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	271	junction_23	28.4122494209762	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTGCAGTGCCTAT	NA	False	NA	-11	True	AATAAA	-18	NA	103591565	103551602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103552274_103554536_103554621_103555433_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ES.19652.91	chr2	-	4144	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-48	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	448.319198569756	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGGTTTATTGGATA	NA	False	NA	NA	False	GATAAA	-2	NA	103627366	103595202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609582_103609669_103609917_103613300_103613388_103613487_103613551_103627075
ES.19652.93	chr2	-	4180	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	-79	2068	-79	9	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTTATGGTACATCA	NA	False	NA	-2	True	AATAAA	-26	NA	103628073	103595353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.94	chr2	-	5978	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-75	6	intron_retention	FALSE	canonical	0	0	junction_16	594.229459484323	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGGTTATGGTACA	NA	False	NA	-5	True	AATAAA	-23	NA	103627524	103595356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618341_103618549_103627075
ES.19652.96	chr2	-	5719	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	6	intron_retention	FALSE	canonical	3	761	junction_17	284.513778164429	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGGTTATGGTACA	NA	False	NA	-5	True	AATAAA	-23	NA	103627994	103595356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ES.19652.97	chr2	-	3902	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	-48	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	451.889351677122	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGGTTATGGTACA	NA	False	NA	-5	True	AATAAA	-23	NA	103627366	103595356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606065_103606322_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ES.19653.1	chr2	+	190	1	Intergenic	novelGene_16308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTACATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	103652574	103652764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103652600_103652800
ES.19654.1	chr2	-	176	1	Intergenic	novelGene_16309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGTCACATTTATTAA	NA	False	NA	NA	False	NA	NA	NA	103659078	103658902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103658900_103659100
ES.19655.1	chr2	-	209	1	Intergenic	novelGene_16310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	AAAAAG	-15	NA	103663038	103662829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103662800_103663000
ES.19656.1	chr2	+	214	1	Intergenic	novelGene_16311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	103672198	103672412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103672200_103672400
ES.19657.1	chr2	-	176	1	Intergenic	novelGene_16312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGTAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	103696590	103696414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103696400_103696600
ES.19658.1	chr2	-	175	1	Intergenic	novelGene_16313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	103736025	103735850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_103735800_103736000
ES.19659.1	chr2	+	1716	4	FSM	ENSMUSG00000032698.16	ENSMUST00000123437.8	848	4	-83	-785	-83	-1	multi-exon	FALSE	canonical	2	6	junction_1	3.85861230093008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTTCTTGATGTGAA	3797	False	NA	NA	False	AATAAA	-19	NA	103799789	103812222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103800067_103800837_103801058_103806349_103806566_103811219
ES.19659.2	chr2	+	1640	4	FSM	ENSMUSG00000032698.16	ENSMUST00000111143.8	1654	4	36	-22	24	-1	multi-exon	FALSE	canonical	1	2	junction_1	5.71547606649408	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTTCTTGATGTGAA	4517	False	NA	NA	False	AATAAA	-19	NA	103800509	103812222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103800711_103800837_103801058_103806349_103806566_103811219
ES.19659.3	chr2	+	2053	3	FSM	ENSMUSG00000032698.16	ENSMUST00000111140.3	1706	3	7	-354	7	350	multi-exon	FALSE	canonical	3	13	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAGGTAATTACCTGG	4582	False	NA	NA	False	CATAAA	-16	NA	103800574	103812573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103801058_103806349_103806566_103811219
ES.1966.1	chr1	-	1738	8	ISM	ENSMUSG00000055214.16	ENSMUST00000065967.14	3557	10	-23	13101	-9	-11695	5prime_fragment	FALSE	canonical	0	0	junction_1	0.349927106111883	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGCTGTTGATGCACT	NA	False	NA	NA	False	AATAAA	-20	NA	176102887	175802972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_175803194_175812012_175812150_175821417_175821616_175872400_175872529_175901979_175902092_175917436_175917606_175967527_175967665_176102251
ES.19660.1	chr2	-	620	1	NIC	ENSMUSG00000046085.8	novel	1037	5	NA	NA	34679	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATATGTCTGTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	103823459	103822839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_103822800_103823500
ES.19661.1	chr2	+	2468	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	41	2231	41	-1994	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTGTGTAAGTGCCT	NA	False	NA	36	True	AATGAA	-34	NA	103858106	103891354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.10	chr2	+	4767	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-9	1977	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAACCATTAGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	103858179	103889845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.11	chr2	+	10013	9	NIC	ENSMUSG00000027180.13	novel	3740	10	NA	NA	-9	-1608	intron_retention	FALSE	canonical	3	344	junction_5	25.0321668059319	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCCCAAAGCATACACAG	NA	False	NA	26	True	ATTAAA	-22	NA	103858179	103891740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.12	chr2	+	4775	10	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-9	-1991	intron_retention	FALSE	canonical	3	178	junction_9	66	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAAGTGCCTATT	NA	False	NA	39	True	AATGAA	-37	NA	103858179	103891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.13	chr2	+	3614	9	NIC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	-4	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	132.543389122204	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTCTCAACTGTATTTA	NA	False	NA	3	True	NA	NA	NA	103858184	103887838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.14	chr2	+	2766	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	125	1849	0	-1612	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATGGCCCAAAGCATAC	NA	False	NA	22	True	ATTAAA	-18	NA	103858190	103891736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.15	chr2	+	5132	10	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	77	junction_9	96.3136594032971	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTATTTATTTATTT	NA	False	NA	10	True	NA	NA	NA	103858191	103887845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.16	chr2	+	6101	9	NIC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	1	5	intron_retention	FALSE	canonical	3	344	junction_5	25.0321668059319	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858191	103887840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.17	chr2	+	2777	10	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	0	-1509	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	127.237311089685	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCACCATGGCTACTG	NA	False	NA	7	True	ATTAAA	-20	NA	103858192	103891839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.18	chr2	+	2545	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-9	1184	3	-1170	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTGTTGATATCCCT	NA	False	NA	NA	False	NA	NA	NA	103858195	103886665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.19	chr2	+	1542	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	130	3068	3	2649	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCGCATGAAATGTTGT	NA	False	NA	NA	False	NA	NA	NA	103858195	103890517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.2	chr2	+	3780	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-62	2	-46	-2	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTTATTTATTTAT	NA	False	NA	12	True	NA	NA	NA	103858142	103887847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.20	chr2	+	3263	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	-7	464	5	-450	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCTTTGTCCATTGA	NA	False	NA	NA	False	NA	NA	NA	103858197	103887385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.21	chr2	+	560	3	ISM	ENSMUSG00000027180.13	ENSMUST00000143799.2	2628	10	5	23539	5	-23539	5prime_fragment	FALSE	canonical	3	377	junction_2	35.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAAGCTGAACTAC	NA	False	NA	NA	False	NA	NA	NA	103858197	103864296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_103858312_103860688_103860779_103863940
ES.19661.22	chr2	+	3628	9	NIC	ENSMUSG00000027180.13	novel	3740	10	NA	NA	5	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	125.450936624642	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858197	103887840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.24	chr2	+	3542	9	NNC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	129.626145125125	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTCTCAACTGTATTTA	NA	False	NA	3	True	NA	NA	NA	103858201	103887838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876070_103880601_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.25	chr2	+	2144	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	137	2459	-2	-2222	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAGGGTGTTGCTAAAGA	NA	False	NA	NA	False	TTTAAA	-17	NA	103858202	103891126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.26	chr2	+	2641	12	NNC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	136.941140761489	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCTCTCAACTGTATT	NA	False	NA	1	True	NA	NA	NA	103858204	103887836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885205_103885296_103885372_103886345
ES.19661.27	chr2	+	3345	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	139	1256	0	-1019	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACCTAATGACTCATTT	NA	False	NA	NA	False	GATAAA	-16	NA	103858204	103892329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.28	chr2	+	1484	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	3	2233	3	-2219	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATAGCTGTGTGGCCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	103858207	103885616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.29	chr2	+	5828	9	ISM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	144	125	144	-111	3prime_fragment	FALSE	canonical	3	344	junction_5	25.0321668059319	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACCTGTTTACATGGTC	NA	False	NA	NA	False	NA	NA	NA	103858348	103887724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.3	chr2	+	2798	11	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-45	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103858143	103887840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.30	chr2	+	4298	10	NNC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	1744	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	119.921373418041	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAACCCTCTCAACTGT	NA	False	NA	-2	True	NA	NA	NA	103859948	103887833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103886455_103886493
ES.19661.31	chr2	+	4993	8	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	12427	5	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	108.079147113661	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTCAACTGTATTTATT	NA	False	NA	5	True	NA	NA	NA	103870631	103887840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.32	chr2	+	3446	7	ISM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	12600	2357	12600	-2343	3prime_fragment	FALSE	canonical	3	344	junction_3	27.2437556556034	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGACATTTTGAGGAAGTA	NA	False	NA	NA	False	NA	NA	NA	103870804	103885492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.33	chr2	+	4149	7	ISM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	14250	4	14250	-4	3prime_fragment	FALSE	canonical	3	344	junction_3	27.2437556556034	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTATTTATTTATTT	NA	False	NA	10	True	NA	NA	NA	103872454	103887845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ES.19661.4	chr2	+	2660	10	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-26	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	150.171835731317	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCTCTCAACTGTATT	NA	False	NA	1	True	NA	NA	NA	103858162	103887836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.5	chr2	+	2279	11	NNC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	118.92220145961	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCTCTCAACTGTATT	NA	False	NA	1	True	NA	NA	NA	103858162	103887836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886841
ES.19661.6	chr2	+	2892	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	109	1739	-14	-1502	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGCTACTGCTTATTA	NA	False	NA	14	True	ATTAAA	-27	NA	103858174	103891846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.7	chr2	+	5176	10	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-14	-1595	intron_retention	FALSE	canonical	3	178	junction_9	66	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGTCTACTGCTAAAG	NA	False	NA	39	True	ATTAAA	-35	NA	103858174	103891753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19661.8	chr2	+	2744	11	NNC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	142.295326697682	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCTCTCAACTGTATT	NA	False	NA	1	True	NA	NA	NA	103858178	103887836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873349_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
ES.19661.9	chr2	+	4627	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	113	0	-10	0	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATGTTGCCCCACCAGA	NA	False	NA	NA	False	AATAAA	-19	NA	103858178	103893585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ES.19662.1	chr2	-	2561	1	Antisense	novelGene_ENSMUSG00000027180.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTTCTAAGCCTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	103864727	103862166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_103862200_103864700
ES.19663.1	chr2	+	1715	4	NNC	ENSMUSG00000068686.13	novel	436	4	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_3	32.4037034920393	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	103900193	103921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103900265_103909202_103909282_103911341_103911444_103920070
ES.19663.2	chr2	+	432	4	FSM	ENSMUSG00000068686.13	ENSMUST00000111132.8	436	4	2	2	2	-2	multi-exon	FALSE	canonical	3	19	junction_3	23.6690139681023	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTAACTGTCTTGGCTA	NA	False	NA	NA	False	NA	NA	NA	103900195	103921530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103921348
ES.19663.3	chr2	+	3659	1	Intergenic	novelGene_16314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103904352	103908011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103904400_103908000
ES.19664.1	chr2	+	645	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	7	1039	7	52	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGGAGGAGTTTAAGCA	NA	False	NA	4	True	AATAAA	-22	NA	103926152	103944660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ES.19664.10	chr2	+	1395	7	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	19	-370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.083573783721	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103926203	103945324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103926273_103927853_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319_103944365_103944628
ES.19664.11	chr2	+	2559	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	34	50	intron_retention	FALSE	canonical	2	8	junction_1	105.21644358179	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGGGAGGAGTTTAAG	NA	False	NA	2	True	AATAAA	-20	NA	103926218	103944658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
ES.19664.12	chr2	+	487	4	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	1059	-185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	104.750497214413	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGTGTAACAAAAGTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	103927243	103944423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103927443_103934515_103934595_103941084_103941190_103944319
ES.19664.13	chr2	+	4379	6	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	1070	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	68.815695884006	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTGACTCTCTTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	103927254	103945702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103927382_103928069_103928190_103934515_103934595_103941084_103942713_103942905_103943203_103943574
ES.19664.14	chr2	+	6363	2	NNC	ENSMUSG00000032679.13	novel	1691	4	NA	NA	12511	-369	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103938695	103945325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103943146_103943412
ES.19664.15	chr2	+	5182	1	Genic_Genomic	ENSMUSG00000032679.13	novel	NA	NA	NA	NA	19275	4942	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCACTGTCTGTCTTCT	285	False	NA	NA	False	ATTAAA	-16	NA	103945459	103950641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_103945500_103950600
ES.19664.16	chr2	+	4972	1	Intergenic	novelGene_16315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGCCTCAGGGTCAT	2448	False	NA	NA	False	ATTAAA	-29	NA	103947622	103952594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_103947600_103952600
ES.19664.2	chr2	+	1724	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	22	-55	-17	55	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGATGTTTAAGTGTT	NA	False	NA	NA	False	AATACA	-15	NA	103926167	103945754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ES.19664.3	chr2	+	389	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	26	1276	-13	-185	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTGTGTAACAAAAGTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	103926171	103944423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ES.19664.4	chr2	+	3291	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	-8	-346	intron_retention	FALSE	canonical	2	8	junction_1	105.21644358179	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103926176	103945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
ES.19664.5	chr2	+	2365	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	-8	-186	intron_retention	FALSE	canonical	2	8	junction_1	105.21644358179	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTGTGTAACAAAAGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	103926176	103944422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103928190_103928356_103928422_103934515_103934595_103941084_103941190_103944319
ES.19664.6	chr2	+	1309	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	31	351	-8	-346	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103926176	103945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ES.19664.7	chr2	+	2971	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	54	-1334	15	1334	multi-exon	FALSE	canonical	3	158	junction_1	38.5082963644055	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCGGGTGTCTGTTTTG	NA	False	NA	NA	False	TTTAAA	-21	NA	103926199	103947033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ES.19664.8	chr2	+	2108	5	NNC	ENSMUSG00000032679.13	novel	1806	5	NA	NA	15	48	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	98.973165555114	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGAGGGAGGAGTTTA	NA	False	NA	0	True	AATAAA	-18	NA	103926199	103944656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_103926273_103926675_103928190_103934515_103934595_103941084_103941190_103944319
ES.19664.9	chr2	+	3087	5	FSM	ENSMUSG00000032679.13	ENSMUST00000168176.8	1806	5	54	-1335	15	1330	multi-exon	FALSE	canonical	3	25	junction_1	94.0063162771524	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTGCGGGTGTCTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	103926199	103947029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_103926273_103928069_103928190_103934515_103934595_103941084_103941190_103944319
ES.19665.1	chr2	+	5904	4	NNC	ENSMUSG00000087473.8	novel	1156	3	NA	NA	-56257	2931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTTAGGATCCAGCCAT	2914	False	NA	NA	False	AATAAA	-23	NA	104030759	104093808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104031169_104031298_104031363_104031614_104031779_104088541
ES.19665.2	chr2	+	5770	4	NNC	ENSMUSG00000087473.8	novel	1156	3	NA	NA	-56145	2933	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGGATCCAGCCATGG	3026	False	NA	NA	False	AATAAA	-25	NA	104030871	104093810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104031169_104031298_104031363_104031614_104031755_104088541
ES.19665.3	chr2	+	5998	1	NIC	ENSMUSG00000087473.8	novel	1404	3	NA	NA	795	2932	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTAGGATCCAGCCATG	NA	False	NA	NA	False	AATAAA	-24	NA	104087811	104093809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104087800_104093800
ES.19666.1	chr2	-	7040	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	209053	0	39902	0	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTCTCATTCCG	NA	False	NA	NA	False	AATAAA	-29	NA	104031626	103973417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
ES.19666.2	chr2	-	4023	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	208728	3342	39577	-3342	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTTGTTCTTTCCCTA	NA	False	NA	NA	False	ATTAAA	-14	NA	104031951	103976759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
ES.19666.3	chr2	-	3205	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	208920	3968	39769	-3968	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATATGGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	104031759	103977385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
ES.19667.1	chr2	+	1100	1	Intergenic	novelGene_16316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAAAACAACAACAACAA	2383	False	NA	NA	False	NA	NA	NA	104115743	104116843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104115700_104116800
ES.19668.1	chr2	+	205	1	Intergenic	novelGene_16317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCCTTTATTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	104201940	104202145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104201900_104202100
ES.19669.1	chr2	+	160	1	Intergenic	novelGene_16320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	104296229	104296389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104296200_104296400
ES.1967.1	chr1	+	176	1	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGTGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	176328057	176328233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_176328100_176328200
ES.19670.1	chr2	+	2728	1	Intergenic	novelGene_16322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAAGGTAACTT	NA	False	NA	NA	False	NA	NA	NA	104318983	104321711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104319000_104321700
ES.19671.1	chr2	-	196	1	Intergenic	novelGene_16318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	104255353	104255157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104255200_104255400
ES.19671.12	chr2	-	7651	17	FSM	ENSMUSG00000027177.15_ENSMUSG00000084516.3	ENSMUST00000111125.3	3651	17	-629	-3371	-137	-3	multi-exon	FALSE	canonical	0	0	junction_5	18.0104136543279	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGCTGGCTTTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	104324928	104256828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264471_104264535_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.13	chr2	-	4704	3	NIC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	5987	-4	intron_retention	FALSE	canonical	3	52	junction_2	6	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACAGCTTGCTGGCTTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	104263610	104256829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104261200_104261496_104261733_104263512
ES.19671.15	chr2	-	7498	16	NIC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	-100	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	14.4821729492964	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACAGCTTGCTGGCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	104324891	104256830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267415_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.16	chr2	-	6965	16	NNC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	-68	-558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.8793667726673	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCGTGTGCTAATTTG	NA	False	NA	NA	False	AATAAA	-23	NA	104324859	104257383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104260677_104261071_104261204_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.18	chr2	-	6140	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-94	1408	-94	-1408	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTTTTGGATTGACAC	NA	False	NA	NA	False	AATAAA	-29	NA	104324885	104258233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.19	chr2	-	6115	16	Fusion	ENSMUSG00000027177.15_ENSMUSG00000084516.3	novel	4125	16	NA	NA	-117	956	multi-exon	FALSE	canonical	2	5	junction_15	14.2257981615561	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTAAACCTCCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	104324152	104258249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
ES.19671.2	chr2	-	196	2	Intergenic	novelGene_16319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCCCCTGCA	NA	False	NA	NA	False	NA	NA	NA	104347504	104255157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104255314_104347464
ES.19671.22	chr2	-	5964	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-75	1565	-75	-1565	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTAATTTTTTTATT	NA	False	NA	NA	False	TATAAA	-17	NA	104324866	104258390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.23	chr2	-	4241	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-84	3297	-84	3	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGCCATGGCACAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	104324875	104260122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.24	chr2	-	214	1	Intergenic	novelGene_16321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCAATCAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	104313117	104312903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104312900_104313100
ES.19671.3	chr2	-	7593	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	-139	0	-139	0	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	False	NA	-1	True	ATTAAA	-20	NA	104324930	104256825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ES.19671.4	chr2	-	7571	16	FSM	ENSMUSG00000027177.15_ENSMUSG00000084516.3	ENSMUST00000111124.8	4125	16	-146	-3300	118	0	multi-exon	FALSE	canonical	2	5	junction_15	13.0833227176178	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	False	NA	-1	True	ATTAAA	-20	NA	104324181	104256825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
ES.19671.8	chr2	-	6658	14	Fusion	ENSMUSG00000027177.15_ENSMUSG00000084516.3	novel	3651	17	NA	NA	-7334	-3	intron_retention	FALSE	canonical	0	0	junction_5	19.3724015245504	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGCTGGCTTTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	104276931	104256828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264471_104264535_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104270638_104271589_104271710_104276856
ES.19672.1	chr2	+	1693	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	-33	-890	-33	114	multi-exon	FALSE	canonical	3	184	junction_1	196.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389474	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389830_104390068_104390321_104398205
ES.19672.10	chr2	+	1852	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-15	-6952	intron_retention	FALSE	canonical	3	20	junction_1	0	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCAGGCTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	104389492	104391443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104390419
ES.19672.11	chr2	+	3174	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-15	-1063	intron_retention	FALSE	canonical	3	251	junction_2	163	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTTGATTACATT	NA	False	NA	NA	False	TTTAAA	-27	NA	104389492	104400711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104398205_104398836_104398995
ES.19672.12	chr2	+	4222	1	Genic_Genomic	ENSMUSG00000086454.8	novel	NA	NA	NA	NA	-13	-4679	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	104389494	104393716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_104389500_104393700
ES.19672.13	chr2	+	1789	1	Genic_Genomic	ENSMUSG00000086454.8	novel	NA	NA	NA	NA	-13	-7112	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	104389494	104391283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_104389500_104391300
ES.19672.14	chr2	+	1707	2	ISM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	-10	6958	-10	-6952	5prime_fragment	FALSE	canonical	3	184	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCAGGCTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	104389497	104391443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_104389830_104390068
ES.19672.15	chr2	+	3858	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	-10	-3078	-10	-295	multi-exon	FALSE	canonical	3	184	junction_1	196.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCTACACAGAGTTT	NA	False	NA	9	True	NA	NA	NA	104389497	104401479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389830_104390068_104390321_104398205
ES.19672.16	chr2	+	1221	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	1	114	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	198.704694347052	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389508	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389552_104390068_104390321_104398205_104398836_104398995
ES.19672.17	chr2	+	1365	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	-12	-817	1	114	multi-exon	FALSE	canonical	3	101	junction_1	238	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389524	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389552_104390068_104390321_104398205
ES.19672.18	chr2	+	5806	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	2	114	intron_retention	FALSE	canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389525	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104393271_104397230
ES.19672.19	chr2	+	1142	3	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	2	-7112	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	40.5	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	104389525	104391283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389552_104390068_104390321_104390419
ES.19672.2	chr2	+	1772	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-33	114	intron_retention	FALSE	canonical	3	251	junction_2	163	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389474	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104398205_104398836_104398995
ES.19672.20	chr2	+	3748	3	FSM	ENSMUSG00000086454.8	ENSMUST00000136364.8	677	3	3	-3074	-2	-302	multi-exon	FALSE	canonical	3	45	junction_1	266	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTCAGCCTACAC	NA	False	NA	2	True	NA	NA	NA	104389526	104401472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389756_104390068_104390321_104398205
ES.19672.21	chr2	+	1567	3	FSM	ENSMUSG00000086454.8	ENSMUST00000136364.8	677	3	3	-893	-2	114	multi-exon	FALSE	canonical	3	45	junction_1	266	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389756_104390068_104390321_104398205
ES.19672.22	chr2	+	2512	4	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-2	72	intron_retention	FALSE	canonical	1	1	junction_2	111.645271582216	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389526	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104390422_104391257_104398205_104398836_104398995
ES.19672.23	chr2	+	1463	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	113	intron_retention	FALSE	canonical	3	37	junction_3	28.4722086720835	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGCTGTGTTAATGT	NA	False	NA	25	True	AAGAAA	-21	NA	104389526	104399290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389552_104390068_104390321_104397520_104397622_104398205
ES.19672.24	chr2	+	1415	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-7113	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	104389526	104391282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389830_104390068_104390321_104390422
ES.19672.25	chr2	+	603	4	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-2	72	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	244.852790241175	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389526	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104389552_104390068_104390321_104398205_104398278_104398995
ES.19672.26	chr2	+	1700	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	72	intron_retention	FALSE	canonical	3	37	junction_3	67.4899169423766	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389526	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389830_104390068_104390321_104397520_104397622_104398205
ES.19672.27	chr2	+	1364	3	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	72	intron_retention	FALSE	canonical	3	58	junction_1	259.5	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389526	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389595_104390068_104390321_104398205
ES.19672.28	chr2	+	3669	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-295	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCTACACAGAGTTT	NA	False	NA	9	True	NA	NA	NA	104389526	104401479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
ES.19672.29	chr2	+	3550	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	-10	-3004	-2	-296	multi-exon	FALSE	canonical	3	101	junction_1	238	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGCCTACACAGAGTT	NA	False	NA	8	True	NA	NA	NA	104389526	104401478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104389552_104390068_104390321_104398205
ES.19672.3	chr2	+	1456	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	-30	114	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	219.022068903265	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389477	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389756_104390068_104390321_104398205_104398836_104398995
ES.19672.30	chr2	+	4068	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	-277	-3084	-2	-295	multi-exon	FALSE	canonical	3	577	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCTACACAGAGTTT	NA	False	NA	9	True	NA	NA	NA	104389526	104401479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104390321_104398205
ES.19672.31	chr2	+	6342	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-2	114	intron_retention	FALSE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389526	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104393495_104396917
ES.19672.32	chr2	+	3391	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	-295	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	198.704694347052	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCTACACAGAGTTT	NA	False	NA	9	True	NA	NA	NA	104389526	104401479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389552_104390068_104390321_104398205_104398836_104398995
ES.19672.33	chr2	+	3903	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-2	-300	intron_retention	FALSE	canonical	3	251	junction_2	163	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTCAGCCTACACAG	NA	False	NA	4	True	NA	NA	NA	104389526	104401474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104398205_104398836_104398995
ES.19672.34	chr2	+	828	4	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-2	93	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	256.130175236474	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTAGAAGTTTCCACTT	NA	False	NA	5	True	AAGAAA	-1	NA	104389526	104399270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104389756_104390068_104390321_104398205_104398278_104398995
ES.19672.35	chr2	+	3594	3	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-2	-295	intron_retention	FALSE	canonical	3	58	junction_1	259.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCTACACAGAGTTT	NA	False	NA	9	True	NA	NA	NA	104389526	104401479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389595_104390068_104390321_104398205
ES.19672.36	chr2	+	2361	4	NNC	ENSMUSG00000086454.8	novel	677	3	NA	NA	-1	72	intron_retention	FALSE	canonical	1	1	junction_3	18.0185090023194	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389527	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389756_104390068_104390321_104390419_104391257_104398205
ES.19672.37	chr2	+	1655	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-1	-7114	intron_retention	FALSE	canonical	3	20	junction_1	0	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTCCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	104389527	104391281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104390419
ES.19672.38	chr2	+	1261	5	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-1	72	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	85.8880084761546	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389527	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389552_104390068_104390321_104397520_104397622_104398205_104398836_104398995
ES.19672.39	chr2	+	1245	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-1	114	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	214.187353086549	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389527	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389595_104390068_104390321_104398205_104398836_104398995
ES.19672.4	chr2	+	1923	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	-320	-896	-24	114	multi-exon	FALSE	canonical	3	577	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389483	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104390321_104398205
ES.19672.40	chr2	+	1600	4	NNC	ENSMUSG00000086454.8	novel	334	3	NA	NA	-98	72	intron_retention	FALSE	canonical	3	37	junction_2	99.0488095166553	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389705	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104390321_104397520_104397622_104398205_104398836_104398995
ES.19672.42	chr2	+	3322	1	NIC	ENSMUSG00000086454.8	novel	582	4	NA	NA	-1572	114	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104395969	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104396000_104399300
ES.19672.43	chr2	+	2462	2	NNC	ENSMUSG00000086454.8	novel	334	3	NA	NA	-1076	72	intron_retention	FALSE	canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104396465	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104396782_104397103
ES.19672.44	chr2	+	3721	1	Genic_Genomic	ENSMUSG00000086454.8	novel	NA	NA	NA	NA	1500	988	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	104399041	104402762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_104399000_104402800
ES.19672.45	chr2	+	2589	1	Intergenic	novelGene_16323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATACA	NA	False	NA	NA	False	NA	NA	NA	104401824	104404413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104401800_104404400
ES.19672.5	chr2	+	1515	4	NNC	ENSMUSG00000086454.8	novel	536	3	NA	NA	-24	114	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	222.40653467618	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389483	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389821_104390068_104390321_104398205_104398836_104398995
ES.19672.6	chr2	+	6360	2	NNC	ENSMUSG00000086454.8	novel	707	2	NA	NA	-23	72	intron_retention	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389484	104399249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104393525_104396929
ES.19672.7	chr2	+	1449	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-23	-7112	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	104389484	104391283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389821_104390068_104390321_104390422
ES.19672.8	chr2	+	1222	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-22	-7112	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	14	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	104389485	104391283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389595_104390068_104390321_104390422
ES.19672.9	chr2	+	1522	4	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	-22	114	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	171.663106759205	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCTGTGTTAATGTC	NA	False	NA	26	True	AAGAAA	-22	NA	104389485	104399291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104389830_104390068_104390321_104398205_104398836_104398995
ES.19673.1	chr2	+	2775	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-90	132	-90	-132	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTTTGCTTACGTAG	6810	False	NA	NA	False	AAAACA	-27	NA	104420777	104495642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.10	chr2	+	2395	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-32	226	-23	-226	multi-exon	FALSE	canonical	3	327	junction_1	20.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAAGCTGTCTTTC	6877	False	NA	NA	False	ATTAAA	-13	NA	104420844	104441525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435
ES.19673.11	chr2	+	638	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-27	1978	-18	-1	multi-exon	FALSE	canonical	3	327	junction_1	20.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGCTTTAGCCTTT	6882	False	NA	3	True	ATTAAA	-15	NA	104420849	104439773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435
ES.19673.13	chr2	+	5401	20	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	179	junction_7	46.1097690660461	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTCCTCCTGTTTCTT	6889	False	NA	13	True	AATAAA	-14	NA	104420856	104495768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.14	chr2	+	3651	22	NNC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	-4	680	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.8369539373665	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAAGCATATGTT	6896	False	NA	NA	False	NA	NA	NA	104420863	104496454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104477839_104477990_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.15	chr2	+	2595	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-13	7	-4	-7	multi-exon	FALSE	canonical	3	327	junction_1	20.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTAACTCGGTATTTC	6896	False	NA	NA	False	AATAAA	-15	NA	104420863	104441744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435
ES.19673.16	chr2	+	2778	20	NNC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.0870784411037	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	6899	False	NA	8	True	AATAAA	-9	NA	104420866	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104421048_104439215_104439318_104439435_104439532_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483428_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.18	chr2	+	2588	19	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	11	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.0752591649365	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	6920	False	NA	8	True	AATAAA	-9	NA	104420887	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104421048_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.2	chr2	+	2906	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	-90	1	-90	-1	multi-exon	FALSE	canonical	3	179	junction_7	45.0891062231222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCTGTTTCTTTGTAT	6810	False	NA	18	True	AATAAA	-19	NA	104420777	104495773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.21	chr2	+	2775	21	NNC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	78	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.1485895176659	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	7073	False	NA	8	True	AATAAA	-9	NA	104421040	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104421190_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.22	chr2	+	3025	21	NNC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	79	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.1485895176659	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	7074	False	NA	8	True	AATAAA	-9	NA	104421041	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104421441_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.23	chr2	+	2530	19	NNC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	18471	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.4514334105475	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	NA	False	NA	8	True	AATAAA	-9	NA	104439433	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483428_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.24	chr2	+	7370	1	Intergenic	novelGene_16326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAACAAAACAATAAC	NA	False	NA	NA	False	NA	NA	NA	104461611	104468981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104461600_104469000
ES.19673.25	chr2	+	3664	1	Intergenic	novelGene_16327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104466258	104469922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104466300_104469900
ES.19673.26	chr2	+	6209	4	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	2002	-4	intron_retention	FALSE	canonical	3	221	junction_2	10.5303793326209	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTCCTGTTTCTTTG	NA	False	NA	15	True	AATAAA	-16	NA	104487886	104495770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104489681_104490863_104494509_104494641_104494703_104495061
ES.19673.27	chr2	+	5562	5	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	2026	-6	intron_retention	FALSE	canonical	3	202	junction_2	17.0733710789639	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTCCTCCTGTTTCTT	NA	False	NA	13	True	AATAAA	-14	NA	104487910	104495768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104489681_104490863_104493793_104494413_104494509_104494641_104494703_104495061
ES.19673.28	chr2	+	6003	3	FSM	ENSMUSG00000027176.9	ENSMUST00000126539.2	582	3	-4742	-679	3384	-11	multi-exon	FALSE	canonical	3	221	junction_1	12.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	NA	False	NA	8	True	AATAAA	-9	NA	104489268	104495763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104494509_104494641_104494703_104495061
ES.19673.3	chr2	+	1094	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	-70	1565	-61	412	multi-exon	FALSE	canonical	3	327	junction_1	20.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAACCCAAAA	6839	False	NA	NA	False	NA	NA	NA	104420806	104440186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215_104439318_104439435
ES.19673.4	chr2	+	2765	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-137	-1984	-42	7	multi-exon	FALSE	canonical	3	327	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGGTGTGGCAATT	6858	False	NA	NA	False	AATAAA	-29	NA	104420825	104441758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215
ES.19673.5	chr2	+	4727	1	Genic_Genomic	ENSMUSG00000027176.9	novel	NA	NA	NA	NA	-37	-14217	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAATAAGAAAAGCATC	6863	False	NA	NA	False	NA	NA	NA	104420830	104425557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_104420800_104425600
ES.19673.6	chr2	+	2524	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-129	-1751	-34	-226	multi-exon	FALSE	canonical	3	327	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAAGCTGTCTTTC	6866	False	NA	NA	False	ATTAAA	-13	NA	104420833	104441525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215
ES.19673.7	chr2	+	772	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	-129	1	-34	-1	multi-exon	FALSE	canonical	3	327	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGCTTTAGCCTTT	6866	False	NA	3	True	ATTAAA	-15	NA	104420833	104439773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104421048_104439215
ES.19673.8	chr2	+	7256	16	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	-33	313	intron_retention	FALSE	canonical	3	179	junction_4	32.919025231957	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTCATATGGTTCTT	6867	False	NA	NA	False	NA	NA	NA	104420834	104495397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104421048_104439215_104439532_104474633_104474667_104475323_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104494509_104494641_104494703_104495061
ES.19674.1	chr2	-	166	1	Intergenic	novelGene_16324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAGAATA	2907	False	NA	NA	False	NA	NA	NA	104430741	104430575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104430600_104430700
ES.19675.1	chr2	-	2366	1	Intergenic	novelGene_16325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104455743	104453377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104453400_104455700
ES.19676.1	chr2	-	176	1	Intergenic	novelGene_16328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACTATATATTCAAA	9725	False	NA	NA	False	NA	NA	NA	104484037	104483861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104483900_104484000
ES.19677.1	chr2	-	138	1	Intergenic	novelGene_16329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	9582	False	NA	NA	False	NA	NA	NA	104484985	104484847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104484800_104485000
ES.19678.1	chr2	-	178	1	Antisense	novelGene_ENSMUSG00000027176.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACCCCAAAA	9147	False	NA	NA	False	NA	NA	NA	104485954	104485776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_104485800_104486000
ES.19679.1	chr2	-	6010	10	FSM	ENSMUSG00000027175.11	ENSMUST00000111118.8	5474	10	-6	-530	0	530	multi-exon	TRUE	canonical	1	1	junction_6	48.9330608530107	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAACTTGTCCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	104542507	104507831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104512304_104514438_104514612_104515707_104515890_104518722_104518920_104520838_104520976_104527854_104528076_104528879_104529001_104530186_104530320_104536700_104536888_104542320
ES.19679.2	chr2	-	5556	10	FSM	ENSMUSG00000027175.11	ENSMUST00000111118.8	5474	10	-9	-73	1	73	multi-exon	FALSE	canonical	1	1	junction_6	48.9330608530107	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACATATGTGGGGTAT	NA	False	NA	NA	False	NA	NA	NA	104542510	104508288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104512304_104514438_104514612_104515707_104515890_104518722_104518920_104520838_104520976_104527854_104528076_104528879_104529001_104530186_104530320_104536700_104536888_104542320
ES.19679.3	chr2	-	104	1	Intergenic	novelGene_16330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATCTTGCGCGCACT	NA	False	NA	NA	False	NA	NA	NA	104527811	104527707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104527700_104527800
ES.19679.4	chr2	-	169	1	Intergenic	novelGene_16331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGTTTAAAACA	NA	False	NA	NA	False	NA	NA	NA	104534746	104534577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104534600_104534700
ES.19679.5	chr2	-	637	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	0	-7	0	7	multi-exon	FALSE	canonical	3	159	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	104542511	104535287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104535547_104536700_104536888_104542320
ES.19679.6	chr2	-	524	3	NNC	ENSMUSG00000027175.11	novel	630	3	NA	NA	-476	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	79.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	104542990	104535287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104535547_104536700_104536888_104542912
ES.1968.1	chr1	-	2297	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGTCTAGAATTGGTT	NA	False	NA	NA	False	NA	NA	NA	176427360	176425063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_176425100_176427400
ES.19680.1	chr2	-	3316	8	NNC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	127	0	intron_retention	FALSE	canonical	1	3	junction_6	49.5605175311879	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	False	NA	-9	True	AATAAA	-24	NA	104573096	104552128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104555127_104557466_104557657_104558427_104558556_104560005_104560920_104573026
ES.19680.2	chr2	-	1774	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	22	5	22	-5	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATTACTCAGAATG	NA	False	NA	-14	True	AATAAA	-19	NA	104573201	104552133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
ES.19680.4	chr2	-	1206	7	NIC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	71	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	54.5588367422425	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATTACTCAGAATG	NA	False	NA	-14	True	AATAAA	-19	NA	104573152	104552133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104573026
ES.19680.6	chr2	-	1719	9	NNC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	71	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.6357635901812	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAACTATTACTCAGAA	NA	False	NA	-16	True	AATAAA	-17	NA	104573152	104552135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558548_104560524_104560920_104573026
ES.19680.7	chr2	-	4467	7	NIC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	71	-7	intron_retention	FALSE	canonical	3	130	junction_5	12.675435561221	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAACTATTACTCAGAA	NA	False	NA	-16	True	AATAAA	-17	NA	104573152	104552135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104560920_104573026
ES.19680.8	chr2	-	3295	8	NNC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	67	-7	intron_retention	FALSE	canonical	0	0	junction_4	64.3022201032288	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAACTATTACTCAGAA	NA	False	NA	-16	True	AATAAA	-17	NA	104573156	104552135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554910_104555127_104557466_104558556_104559735_104560920_104573026
ES.19680.9	chr2	-	3780	3	NNC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	36	-4220	intron_retention	TRUE	non_canonical	0	0	junction_1	67.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACAGAAACAAAACCCCC	NA	False	NA	NA	False	NA	NA	NA	104573187	104557145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104559038_104559192_104560920_104573026
ES.19681.1	chr2	+	1762	1	Intergenic	novelGene_16332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAATACGAGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	104647261	104649023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104647300_104649000
ES.19682.1	chr2	-	9303	12	FSM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-264	-2	-264	2	multi-exon	FALSE	canonical	3	14	junction_3	32.5683007674032	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTTGGATTTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	104647369	104585137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.10	chr2	-	5834	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-14	-14279	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	31.0365156891435	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCCTTCTAGTGGTCA	NA	False	NA	-2	True	AATAAA	-18	NA	104647119	104599418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104600526_104606544_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.11	chr2	-	6673	9	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-249	-14281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.2585579842154	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATCCTTCTAGTGGT	NA	False	NA	-4	True	AATAAA	-16	NA	104647354	104599420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625235_104625319_104625532_104625640_104646944
ES.19682.12	chr2	-	2878	6	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	29666	-14281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5361159418499	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATCCTTCTAGTGGT	NA	False	NA	-4	True	AATAAA	-16	NA	104617375	104599420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606544_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864
ES.19682.13	chr2	-	5722	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-276	-15176	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTGTTTATTCTTG	NA	False	NA	4	True	AATAAA	-27	NA	104647381	104600315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.14	chr2	-	5288	8	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-343	15182	-343	-15182	5prime_fragment	FALSE	canonical	3	39	junction_1	21.0877660635502	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATTTTGTTGTTTA	NA	False	NA	-2	True	AATAAA	-21	NA	104647448	104600321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.15	chr2	-	5148	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-15185	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	31.0365156891435	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTATTTTGTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	104647339	104600324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104600526_104606544_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.16	chr2	-	7132	7	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-15	-15186	intron_retention	FALSE	canonical	3	33	junction_1	20.558858593479	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104647120	104600325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.17	chr2	-	5657	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-249	-15186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.2743342775839	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104647354	104600325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606544_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.18	chr2	-	2799	4	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-235	-15186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.24345659257	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104647340	104600325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104600400_104618320_104620543_104625532_104625640_104646944
ES.19682.19	chr2	-	4841	8	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	318	-15186	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	33.8103956963366	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104646723	104600325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646662
ES.19682.2	chr2	-	5347	9	NIC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	29783	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	39.9311908162028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGTGTTTGGATTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	104617258	104585139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864
ES.19682.20	chr2	-	5336	8	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	318	-15186	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	34.5519425603522	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104646723	104600325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646662
ES.19682.21	chr2	-	5376	9	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	-248	-15415	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	32.6111081535111	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCCCGTCTCTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	104647353	104600554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944_104647059_104647137
ES.19682.22	chr2	-	5599	8	NNC	ENSMUSG00000074994.7	novel	8973	12	NA	NA	-392	-15415	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCCCGTCTCTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	104647497	104600554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.3	chr2	-	2816	6	ISM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	40455	1550	40455	-1550	3prime_fragment	FALSE	canonical	3	14	junction_3	8.79545337091841	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCATTTCTTTATTGGT	NA	False	NA	NA	False	AATAAA	-27	NA	104606586	104586689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516
ES.19682.4	chr2	-	6522	12	FSM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-277	2792	-277	-2792	multi-exon	FALSE	canonical	3	14	junction_3	32.5683007674032	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTATAACTGATTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	104647382	104587931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.5	chr2	-	6405	11	NIC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-262	-2798	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.8430767872184	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTGATTTATAACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	104647367	104587937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104588951_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.6	chr2	-	6081	9	NIC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-231	-2800	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.9009811878268	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACTTGATTTATAACT	NA	False	NA	NA	False	AATAAA	-13	NA	104647336	104587939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104588951_104596303_104596402_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.7	chr2	-	6938	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-104	-13788	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCATGTTACAAATATTT	NA	False	NA	NA	False	AATAAA	-28	NA	104647209	104598927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.8	chr2	-	6594	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-244	-14272	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGGTCATTGTTTT	NA	False	NA	5	True	AATAAA	-25	NA	104647349	104599411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19682.9	chr2	-	6126	8	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-276	14277	-276	-14277	5prime_fragment	FALSE	canonical	3	39	junction_1	21.0877660635502	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTCTAGTGGTCATT	NA	False	NA	0	True	AATAAA	-20	NA	104647381	104599416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ES.19683.1	chr2	-	1737	1	Intergenic	novelGene_16333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTGAGGCAAACATGT	NA	False	NA	NA	False	AATAAA	-18	NA	104659111	104657374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104657400_104659100
ES.19683.2	chr2	-	6376	8	NNC	ENSMUSG00000027171.11	novel	2872	6	NA	NA	46	3710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.60247758603645	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTGAGGCAAACATG	NA	False	NA	NA	False	AATAAA	-17	NA	104680175	104657375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104658154_104658219_104661840_104661933_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ES.19683.3	chr2	-	6179	7	NNC	ENSMUSG00000027171.11	novel	2872	6	NA	NA	120	3521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.08811250749125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTTGGTTTTATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	104680101	104657564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104661840_104661933_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ES.19683.4	chr2	-	4099	7	NNC	ENSMUSG00000027171.11	novel	2872	6	NA	NA	107	3519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.08811250749125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTTGGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	104680114	104657566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104659946_104662130_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ES.19683.5	chr2	-	5520	8	NNC	ENSMUSG00000027171.11	novel	2872	6	NA	NA	179	3516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.60247758603645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTATTGTTGGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	104680042	104657569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104659188_104659782_104661840_104661933_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ES.19683.6	chr2	-	1078	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	93	1701	93	-1701	multi-exon	FALSE	canonical	1	4	junction_1	3.61109401705356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATTCACCACAGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	104680128	104662786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ES.19683.7	chr2	-	1350	1	NIC	ENSMUSG00000027171.11	novel	2872	6	NA	NA	87	-9105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGGAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	AAAAAG	-27	NA	104680134	104678784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104678800_104680100
ES.19684.1	chr2	+	161	1	Intergenic	novelGene_16334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104704189	104704350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104704200_104704400
ES.19685.1	chr2	+	3694	15	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	-11	139	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	12.6517321553459	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGAATATTCTTTCAAA	NA	False	NA	14	True	ACTAAA	-31	NA	104716657	104830221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.10	chr2	+	2632	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	54322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.0809835782369	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTCCCTCTGTAGCATGT	NA	False	NA	NA	False	NA	NA	NA	104716669	104902571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104902452
ES.19685.11	chr2	+	3465	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	17.6263297370723	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTCAAAAGGCTATTT	NA	False	NA	NA	False	CATAAA	-15	NA	104716669	104830076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.12	chr2	+	3939	18	FSM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	1	4	1	-4	multi-exon	FALSE	canonical	2	12	junction_15	13.2482289734989	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCAAAAGGCTATTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	104716669	104830078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.13	chr2	+	3889	17	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	130	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	12.7174830450054	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716669	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.14	chr2	+	3487	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	17.3611555554987	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716669	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.15	chr2	+	3776	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	3	130	combination_of_known_splicesites	FALSE	canonical	3	5	junction_12	14.3232522687955	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716671	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.16	chr2	+	3455	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	3	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.8815056660955	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716671	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.17	chr2	+	3859	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	3	134	combination_of_known_splicesites	FALSE	canonical	2	12	junction_13	13.435276947896	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGCTGAATATTCTT	NA	False	NA	9	True	ACTAAA	-26	NA	104716671	104830216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.18	chr2	+	3789	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	8	106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	16.2097364431244	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAGAACAAAATAT	NA	False	NA	-19	True	NA	NA	NA	104716676	104830188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805930_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.19	chr2	+	3283	10	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	11	137	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5199258724485	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716679	104830219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104805985_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.2	chr2	+	3762	15	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	-8	137	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	15.1410039297267	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716660	104830219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.20	chr2	+	2141	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	11	768	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	16.4120128767518	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGTTTGCCCACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	104716679	104821136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104815318_104815454_104820212
ES.19685.21	chr2	+	3743	14	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	11	137	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	16.3323471102649	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716679	104830219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.22	chr2	+	3343	11	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	11	128	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	18.3904866711025	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCTTAAGTGCTGAAT	NA	False	NA	3	True	ACTAAA	-20	NA	104716679	104830210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104821424_104822898_104824813_104824948_104829307
ES.19685.23	chr2	+	3670	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	11	136	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	16.135494001321	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCTGAATATTCTTTC	NA	False	NA	11	True	ACTAAA	-28	NA	104716679	104830218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.24	chr2	+	3705	16	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.676600980455	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGCTGAATATTCTT	NA	False	NA	9	True	ACTAAA	-26	NA	104716680	104830216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104760190_104760260_104761328_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104805985_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.25	chr2	+	4533	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	751	intron_retention	FALSE	canonical	2	3	junction_6	16.078142512948	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGGTTATGTAATTTA	NA	False	NA	NA	False	AATAAA	-11	NA	104716680	104830833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.26	chr2	+	3883	15	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	134	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	15.3642840539283	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGCTGAATATTCTT	NA	False	NA	9	True	ACTAAA	-26	NA	104716680	104830216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.27	chr2	+	4023	17	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	130	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	14.7563545633737	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716680	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.28	chr2	+	3316	16	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	-3768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.8461386514636	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGGCCCCTATAAGT	NA	False	NA	NA	False	NA	NA	NA	104716680	104826314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716876_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104825976
ES.19685.29	chr2	+	4569	13	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	1621	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	18.7325845046065	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTTAAGGTTTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	104716680	104849870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104848014
ES.19685.3	chr2	+	2404	7	ISM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	-8	52508	-8	-4338	5prime_fragment	FALSE	canonical	3	21	junction_6	12.6809130410848	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGTTTAGCTTCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	104716660	104777574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761
ES.19685.30	chr2	+	5999	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	12	2823	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	14.7954948097949	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTACTGGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	104716680	104851072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104848014
ES.19685.31	chr2	+	4066	18	FSM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	12	-134	12	134	multi-exon	FALSE	canonical	2	12	junction_15	13.2482289734989	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGCTGAATATTCTT	NA	False	NA	9	True	ACTAAA	-26	NA	104716680	104830216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.32	chr2	+	3709	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	2	12	junction_13	13.435276947896	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTCAAAAGGCTATTT	NA	False	NA	NA	False	CATAAA	-15	NA	104716681	104830076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.33	chr2	+	1623	14	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	14	-3765	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	16.3134967899219	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCCCCTATAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	104716682	104826317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104824813_104824948_104825976
ES.19685.34	chr2	+	1806	12	ISM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	14	23389	14	-13675	5prime_fragment	FALSE	canonical	3	16	junction_8	13.5871840440885	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATTTGTTTAACCTCT	NA	False	NA	NA	False	ATTAAA	-10	NA	104716682	104806693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900
ES.19685.35	chr2	+	3660	14	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	14	135	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.3116831111066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGCTGAATATTCTTT	NA	False	NA	10	True	ACTAAA	-27	NA	104716682	104830217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.36	chr2	+	4645	17	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	14	754	intron_retention	FALSE	canonical	2	3	junction_6	14.7563545633737	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATGTAATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	104716682	104830836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.37	chr2	+	3843	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	14	136	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	14.3814695586601	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCTGAATATTCTTTC	NA	False	NA	11	True	ACTAAA	-28	NA	104716682	104830218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.38	chr2	+	3442	12	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	15	126	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	18.0403587950613	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAACCTTAAGTGCTGA	NA	False	NA	1	True	ACTAAA	-18	NA	104716683	104830208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104803511_104803641_104804202_104804263_104805930_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.39	chr2	+	2297	11	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	19	-2335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.4780951399218	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTGGTCATGATTT	NA	False	NA	NA	False	NA	NA	NA	104716687	104818033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104745002_104745075_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104816873
ES.19685.4	chr2	+	3867	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	-2	137	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	15.5400557699557	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716666	104830219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
ES.19685.40	chr2	+	3465	12	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	35	139	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	15.7941300948975	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGAATATTCTTTCAAA	NA	False	NA	14	True	ACTAAA	-31	NA	104716703	104830221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.41	chr2	+	228	1	Intergenic	novelGene_16335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTCTTAGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	104717904	104718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104717900_104718100
ES.19685.42	chr2	+	3183	9	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	37868	219	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	10.6653645038508	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGCATGACCACATAG	NA	False	NA	94	True	ATTAAA	-29	NA	104775758	104830301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.43	chr2	+	1603	1	Intergenic	novelGene_16338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104785249	104786852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104785200_104786900
ES.19685.44	chr2	+	179	1	Intergenic	novelGene_16341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	104809268	104809447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_104809300_104809400
ES.19685.45	chr2	+	2518	3	ISM	ENSMUSG00000045106.13	ENSMUST00000111114.8	3944	18	104754	-134	-1112	134	3prime_fragment	FALSE	canonical	3	35	junction_1	5.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGCTGAATATTCTT	53	False	NA	9	True	ACTAAA	-26	NA	104821422	104830216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_104822898_104824813_104824948_104829307
ES.19685.46	chr2	+	5166	1	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	2380	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAAAGGCTATTTTTCA	3545	False	NA	NA	False	CATAAA	-19	NA	104824914	104830080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104824900_104830100
ES.19685.47	chr2	+	1994	1	Antisense	novelGene_ENSMUSG00000027170.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCACCTGTGGAATGTAA	9619	False	NA	NA	False	ATTAAA	-22	NA	104830988	104832982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_104831000_104833000
ES.19685.5	chr2	+	3461	11	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	0	139	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.313207915828	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTGAATATTCTTTCAAA	NA	False	NA	14	True	ACTAAA	-31	NA	104716668	104830221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.6	chr2	+	4037	11	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	749	intron_retention	FALSE	canonical	1	1	junction_2	16.1108658985171	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAGGTTATGTAATT	NA	False	NA	NA	False	AATAAA	-9	NA	104716669	104830831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.7	chr2	+	3697	15	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8283200083178	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAGAACAAAATAT	NA	False	NA	-19	True	NA	NA	NA	104716669	104830188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104736799_104736887_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
ES.19685.8	chr2	+	2620	12	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	2620	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.1378360403778	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGAACATATGTGTGT	NA	False	NA	NA	False	GATAAA	-23	NA	104716669	104822988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104811334_104811446_104815318_104815454_104821424
ES.19685.9	chr2	+	3598	15	NNC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	1	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.827546902797	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAGTGCTGAATAT	NA	False	NA	5	True	ACTAAA	-22	NA	104716669	104830212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104760190_104760260_104761328_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104821424_104822898_104824813_104824948_104829307
ES.19686.1	chr2	-	231	1	Intergenic	novelGene_16336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTAAACTAGTTCATC	NA	False	NA	NA	False	AAGAAA	-6	NA	104758481	104758250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104758200_104758500
ES.19687.1	chr2	-	221	1	Intergenic	novelGene_16337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAAGTT	NA	False	NA	NA	False	NA	NA	NA	104768055	104767834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104767800_104768100
ES.19688.1	chr2	-	340	1	Intergenic	novelGene_16339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAGAGAAAGAGAGAA	NA	False	NA	NA	False	AAGAAA	-9	NA	104791034	104790694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104790700_104791000
ES.19689.1	chr2	-	182	1	Intergenic	novelGene_16340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAG	8622	False	NA	NA	False	NA	NA	NA	104808367	104808185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104808200_104808400
ES.1969.1	chr1	-	6727	1	Genic_Genomic	ENSMUSG00000057335.12	novel	NA	NA	NA	NA	9019	6294	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCCAGCACCATTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	176561651	176554924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_176554900_176561700
ES.1969.10	chr1	-	7024	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-132	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	18	junction_7	15.0340334130539	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCATAGATTTCATGT	NA	False	NA	-6	True	AATAAA	-21	NA	176641765	176561224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.11	chr1	-	6522	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	17.0829444071968	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641740	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.12	chr1	-	7002	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-107	0	intron_retention	FALSE	non_canonical	3	5	junction_9	17.5179591486441	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641740	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176596798_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.13	chr1	-	7127	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-94	0	intron_retention	FALSE	non_canonical	3	5	junction_9	15.8673131404651	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641727	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176596798_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.14	chr1	-	7024	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	10	junction_5	14.8579609223501	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641741	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.15	chr1	-	6905	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	5	junction_9	15.9064588170581	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641721	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.16	chr1	-	7387	8	NIC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-1929	0	intron_retention	FALSE	canonical	3	45	junction_6	3.65892813567591	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176586011	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176570215_176577491_176577727_176582731_176584550_176585962
ES.1969.17	chr1	-	6473	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	18.5537655081892	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641742	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.18	chr1	-	6584	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	16.9705627484771	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641745	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.19	chr1	-	6790	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	18.4992492340155	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641721	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610117_176616028_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.2	chr1	-	6626	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-89	5	at_least_one_novel_splicesite	TRUE	non_canonical	3	8	junction_9	15.2633174025665	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTTTTACCATG	NA	False	NA	5	True	AATAAA	-32	NA	176641722	176561213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.20	chr1	-	6673	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_10	16.3715539206814	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641741	176561227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.21	chr1	-	6779	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_10	14.6211414663075	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176641740	176561228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.23	chr1	-	6716	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	5	junction_9	18.7853370714738	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176641692	176561228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.24	chr1	-	7080	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	72	0	intron_retention	FALSE	non_canonical	3	24	junction_5	12.7623094779071	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176641561	176561228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.26	chr1	-	6711	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	10	junction_5	16.2795789674679	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176641723	176561228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.27	chr1	-	6553	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	10	junction_5	17.8028469078597	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176641673	176561228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.28	chr1	-	7339	21	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-207	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	18.1446273039707	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAATGATCATAGATTT	NA	False	NA	-11	True	AATAAA	-16	NA	176641840	176561229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176634564_176634702_176641461
ES.1969.3	chr1	-	6715	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-112	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_10	16.4572022583682	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGATTTCATGTCTTTT	NA	False	NA	-1	True	AATAAA	-26	NA	176641745	176561219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.30	chr1	-	7157	21	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-107	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	19.0814045604615	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCAATGATCATAGATT	NA	False	NA	-12	True	AATAAA	-15	NA	176641740	176561230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176634564_176634702_176641461
ES.1969.32	chr1	-	2928	8	ISM	ENSMUSG00000057335.12	ENSMUST00000057037.13	6930	20	51701	448	-90	0	3prime_fragment	FALSE	canonical	3	24	junction_5	10.2936477340868	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAGAAAAGGATTTG	NA	False	NA	NA	False	TTTAAA	-3	NA	176582989	176561666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731
ES.1969.33	chr1	-	6380	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-112	-51	at_least_one_novel_splicesite	FALSE	non_canonical	3	23	junction_5	13.2405822904652	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGGTGAATCTTAATT	NA	False	NA	NA	False	AATAAA	-31	NA	176641745	176561956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.34	chr1	-	5699	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-16	-54	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	17.0829444071968	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGGGTGAATCTTA	NA	False	NA	NA	False	AATAAA	-28	NA	176641649	176561959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.35	chr1	-	5977	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-39	-57	at_least_one_novel_splicesite	FALSE	non_canonical	3	11	junction_10	14.6211414663075	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATAATTTGGGTGAATC	NA	False	NA	NA	False	AATAAA	-25	NA	176641672	176561962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.36	chr1	-	6165	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-45	-61	at_least_one_novel_splicesite	FALSE	non_canonical	3	18	junction_7	14.9457004258361	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTATAATTTGGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	176641678	176561966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.37	chr1	-	6285	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-22	-62	intron_retention	FALSE	non_canonical	3	5	junction_9	15.7664617108244	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACACTATAATTTGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	176641655	176561967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176596798_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.38	chr1	-	5038	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_5	13.1345055276955	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTATCTTTGTCTTCT	NA	False	NA	NA	False	AAAACA	-22	NA	176641622	176563145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.39	chr1	-	4946	19	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	5	junction_9	15.9064588170581	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTATCTTTGT	NA	False	NA	NA	False	AAAACA	-17	NA	176641685	176563150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.4	chr1	-	7514	6	Fusion	ENSMUSG00000104154.2_ENSMUSG00000057335.12	novel	3051	7	NA	NA	1268	-2	intron_retention	FALSE	canonical	3	49	junction_4	2.92574776766556	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAGATTTCATGTCTTT	NA	False	NA	-2	True	AATAAA	-25	NA	176579713	176561220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176570215_176577491
ES.1969.40	chr1	-	5132	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	23	junction_5	13.2405822904652	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTATCTTTGT	NA	False	NA	NA	False	AAAACA	-17	NA	176641691	176563150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.41	chr1	-	3895	8	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-19	855	at_least_one_novel_splicesite	FALSE	non_canonical	3	43	junction_2	10.6195814514547	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGTTACATCTCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	176641652	176599440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.42	chr1	-	3321	3	ISM	ENSMUSG00000057335.12	ENSMUST00000192961.6	2708	7	-19	11248	-19	-1174	5prime_fragment	FALSE	canonical	3	66	junction_1	6.5	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	176641652	176617206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_176620192_176621070_176621216_176641461
ES.1969.5	chr1	-	6488	18	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	8	junction_9	17.1712320778873	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATAGATTTCATGTCT	NA	False	NA	-4	True	AATAAA	-23	NA	176641671	176561222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.6	chr1	-	7109	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-107	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	23	junction_5	13.2405822904652	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATAGATTTCATGTCT	NA	False	NA	-4	True	AATAAA	-23	NA	176641740	176561222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.7	chr1	-	6886	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	3	18	junction_7	14.9457004258361	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATAGATTTCATGTCT	NA	False	NA	-4	True	AATAAA	-23	NA	176641655	176561222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.8	chr1	-	6984	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-173	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	10	junction_5	16.4171722810712	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCATAGATTTCATGT	NA	False	NA	-6	True	AATAAA	-21	NA	176641806	176561224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491_176577619_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.1969.9	chr1	-	7082	20	NNC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-112	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_5	13.1345055276955	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCATAGATTTCATGT	NA	False	NA	-6	True	AATAAA	-21	NA	176641745	176561224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610119_176616029_176616112_176620101_176620192_176621070_176621216_176641461
ES.19690.1	chr2	-	2176	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	49	-942	12	942	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAACTGTCAGTTTGTCT	2689	False	NA	NA	False	AATAAA	-15	NA	104847376	104829058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.13	chr2	-	1187	12	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	659.54472150827	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	2673	False	NA	-19	True	AGTAAA	-14	NA	104847392	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830059_104830118_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.14	chr2	-	1273	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	684.2597752316	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	2641	False	NA	-19	True	AGTAAA	-14	NA	104847424	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830181_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.15	chr2	-	6981	9	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	3166	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	757.906326665769	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	5843	False	NA	-19	True	AGTAAA	-14	NA	104844222	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104838114_104838149_104843291_104843542_104843667_104844089
ES.19690.16	chr2	-	1303	12	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	830.618916907126	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	2689	False	NA	-19	True	AGTAAA	-14	NA	104847376	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104836702_104836775_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.18	chr2	-	1229	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	657.305225903461	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	2686	False	NA	-19	True	AGTAAA	-14	NA	104847379	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836221_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.19	chr2	-	1308	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	204	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	687.172678444072	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTGACTAATCTAGCT	2881	False	NA	-20	True	AGTAAA	-13	NA	104847184	104830004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847020
ES.19690.2	chr2	-	4437	5	FSM	ENSMUSG00000027170.13	ENSMUST00000131266.2	1964	5	-2467	-6	-2467	6	multi-exon	FALSE	canonical	3	1979	junction_2	112.169514575039	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTAGCTAATTATTTTC	9982	False	NA	-10	True	AGTAAA	-23	NA	104840083	104829994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125
ES.19690.22	chr2	-	1203	10	NIC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	1	98	junction_5	647.355494147125	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTTGACTAATCTAGC	2631	False	NA	-21	True	AGTAAA	-12	NA	104847434	104830005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.25	chr2	-	1089	10	NIC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	2	15	junction_2	722.97640963512	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAATTTGACTAATCT	2682	False	NA	-24	True	AGTAAA	-9	NA	104847383	104830008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104830187_104830586_104830648_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.26	chr2	-	1251	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	691.461213662777	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATTATCAACTGAAAT	2640	False	NA	-35	True	AAAAAG	-9	NA	104847425	104830019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845127_104845248_104847290
ES.19690.27	chr2	-	5456	2	ISM	ENSMUSG00000027170.13	ENSMUST00000131266.2	1964	5	-908	2294	-908	-2261	5prime_fragment	FALSE	canonical	3	2009	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAGAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	104838524	104832294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_104835352_104836125
ES.19690.28	chr2	-	3685	1	NIC	ENSMUSG00000027170.13	novel	1964	5	NA	NA	1189	-2261	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAGAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	104835979	104832294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104832300_104836000
ES.19690.29	chr2	-	4708	7	NIC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	2	-2293	intron_retention	FALSE	canonical	3	1722	junction_6	217.285334679234	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	2642	False	NA	NA	False	NA	NA	NA	104847423	104832326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104835352_104836125_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.30	chr2	-	559	3	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	51	13886	14	-13853	5prime_fragment	FALSE	canonical	3	1722	junction_2	149	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGATACAGCATTCAGA	2691	False	NA	NA	False	NA	NA	NA	104847374	104843886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_104844229_104845114_104845248_104847290
ES.19690.4	chr2	-	7098	7	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	3166	6	intron_retention	TRUE	non_canonical	0	0	junction_5	1079.77878392855	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTAGCTAATTATTTTC	5843	False	NA	-10	True	AGTAAA	-23	NA	104844222	104829994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104835269_104835352_104836125_104836226_104837100_104838114_104838149_104843667_104844089
ES.19690.5	chr2	-	1302	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	-15	-4	-15	4	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATCTAGCTAATTATTT	2625	False	NA	-12	True	AGTAAA	-21	NA	104847440	104829996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19690.7	chr2	-	7348	8	NIC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	2204	0	intron_retention	FALSE	canonical	3	1979	junction_2	204.774340707631	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	4881	False	NA	-16	True	AGTAAA	-17	NA	104845184	104830000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104843667_104844089_104844229_104845114
ES.19690.9	chr2	-	1656	11	NNC	ENSMUSG00000027170.13	novel	1283	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	657.305225903461	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGACTAATCTAGCTA	2662	False	NA	-19	True	AGTAAA	-14	NA	104847403	104830003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104836702_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ES.19691.1	chr2	-	177	1	Intergenic	novelGene_16342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGGGGATTTAC	NA	False	NA	NA	False	NA	NA	NA	104945765	104945588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_104945600_104945800
ES.19692.1	chr2	+	2955	9	FSM	ENSMUSG00000016458.16	ENSMUST00000133470.8	1220	9	-384	-1351	88	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGAGTCTTTTGGTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	104956961	105003961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000364_105002567
ES.19693.1	chr2	-	3937	1	Intergenic	novelGene_16343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAAGCCATCTTCTCAG	NA	False	NA	NA	False	NA	NA	NA	105076125	105072188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105072200_105076100
ES.19694.1	chr2	+	158	2	Intergenic	novelGene_16344	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105192384	105195065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_105192396_105194918
ES.19694.2	chr2	+	207	1	Intergenic	novelGene_16345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACCTAGGAACATGTT	NA	False	NA	NA	False	NA	NA	NA	105194907	105195114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_105194900_105195100
ES.19695.1	chr2	-	3402	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-339	-343	-339	343	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGTCATGGTGTTTT	NA	False	NA	0	True	NA	NA	NA	105230003	105216292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.10	chr2	-	2180	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	661.175740631793	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229611	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222163_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.11	chr2	-	2160	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	665.609495124581	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229750	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229322
ES.19695.12	chr2	-	3020	5	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	1454	junction_3	91.9279609259337	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229691	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105225218_105229314
ES.19695.13	chr2	-	3903	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	1264	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	654.943234181406	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105228400	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105226229
ES.19695.14	chr2	-	2252	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-288	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	628.402418836847	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229952	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225141_105225218_105229314
ES.19695.15	chr2	-	2102	5	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	732.487670544699	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229745	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105218372_105219321_105219522_105223933_105224113_105225023_105225218_105229314
ES.19695.16	chr2	-	4960	5	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-85	0	intron_retention	FALSE	canonical	3	1454	junction_2	115.18327786619	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229749	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105218372_105219321_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.17	chr2	-	1847	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-769	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	770.421546946865	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105226462	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225141_105225218_105226229
ES.19695.18	chr2	-	1970	7	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.57104595098	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229624	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105217600_105217671_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.19	chr2	-	2005	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	665.609495124581	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229611	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225194_105229314
ES.19695.2	chr2	-	3532	4	ISM	ENSMUSG00000005973.7	ENSMUST00000127019.2	2208	5	563	-976	563	338	intron_retention	FALSE	canonical	3	1454	junction_3	105.506187285654	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTCTTTGGTCATGGT	NA	False	NA	-5	True	NA	NA	NA	105225130	105216297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933
ES.19695.20	chr2	-	2020	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	675.8646610084	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229611	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223942_105224113_105225023_105225218_105229314
ES.19695.21	chr2	-	2339	7	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	772.686816677149	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229619	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105226229_105226532_105229314
ES.19695.22	chr2	-	1898	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	99	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	665.609495124581	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105229565	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229398
ES.19695.23	chr2	-	1699	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	804.413724398086	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105229691	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218102_105219427_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229347
ES.19695.24	chr2	-	2014	7	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	618.57104595098	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105229642	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225097_105225141_105225218_105229314
ES.19695.25	chr2	-	4232	5	FSM	ENSMUSG00000005973.7	ENSMUST00000127019.2	2208	5	-2025	1	1946	-1	multi-exon	FALSE	canonical	3	1454	junction_3	115.810999045859	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105227718	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023
ES.19695.26	chr2	-	1879	7	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.57104595098	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105229614	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105217856_105218007_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.27	chr2	-	3936	1	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	4483	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCATGTGTCTTGTGGTG	NA	False	NA	-5	True	AATAAA	-18	NA	105221210	105217274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105217300_105221200
ES.19695.28	chr2	-	1997	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-132	855	-132	-217	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTCCCTGGCTGTGAG	NA	False	NA	28	True	TTTAAA	-17	NA	105229796	105217490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.29	chr2	-	1785	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-96	1031	-96	-393	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGCAATCAAAAAAAGA	NA	False	NA	0	True	AATAAA	-37	NA	105229760	105217666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.3	chr2	-	2949	7	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	71	338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.57104595098	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTCTTTGGTCATGGT	NA	False	NA	-5	True	NA	NA	NA	105229593	105216297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105217291_105217328_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.30	chr2	-	1816	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-267	-415	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	628.402418836847	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTGTTTTTAACA	NA	False	NA	-22	True	AATAAA	-15	NA	105229931	105217688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225141_105225218_105229314
ES.19695.31	chr2	-	6359	4	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	315	1054	315	-416	intron_retention	FALSE	canonical	3	1454	junction_3	105.506187285654	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTTTGTTTTTAAC	NA	False	NA	-23	True	AATAAA	-14	NA	105229349	105217689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933
ES.19695.32	chr2	-	1629	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-108	1199	-108	-561	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAATCAATTTGTATT	NA	False	NA	NA	False	NA	NA	NA	105229772	105217834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.33	chr2	-	1321	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	8	1391	8	-753	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTGCTACAGCATGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	105229656	105218026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.4	chr2	-	2788	1	Genic_Genomic	ENSMUSG00000005973.7	novel	NA	NA	NA	NA	6607	337	mono-exon	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCTCTTTGGTCATGG	NA	False	NA	-6	True	NA	NA	NA	105219086	105216298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_105216300_105219100
ES.19695.5	chr2	-	2424	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-335	631	-335	7	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGGTGTTTGACTC	NA	False	NA	3	True	AATAAA	-26	NA	105229999	105217266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ES.19695.6	chr2	-	7008	4	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	83	637	83	1	intron_retention	FALSE	canonical	3	1454	junction_3	105.506187285654	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTCTTGTGGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	105229581	105217272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933
ES.19695.7	chr2	-	1971	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	665.609495124581	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229559	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225212_105229314
ES.19695.8	chr2	-	1589	4	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	100	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	801.806709874643	886	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229564	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105218261_105223954_105224113_105225023_105225218_105229314
ES.19695.9	chr2	-	7245	3	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	99	0	intron_retention	FALSE	canonical	3	1626	junction_2	31	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229565	105217273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105218372_105219321_105225218_105229314
ES.19696.1	chr2	-	748	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	-39	-64	-39	64	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	105385229	105384481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105384500_105385200
ES.19697.1	chr2	-	191	1	Intergenic	novelGene_16346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGCATTTATGAGACA	NA	False	NA	NA	False	NA	NA	NA	105470666	105470475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105470500_105470700
ES.19698.1	chr2	+	2665	14	NIC	ENSMUSG00000027168.22	novel	3069	12	NA	NA	-555	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.79940806503179	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTGTTTTGCAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	105504898	105527584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_105505009_105506088_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515095_105515138_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650_105525802_105526614
ES.19698.2	chr2	+	2645	15	NNC	ENSMUSG00000027168.22	novel	2814	14	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.728431359084684	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAATACTCTATAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	105505787	105527413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_105505995_105506088_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515095_105515138_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105523988_105524043_105525650_105525802_105526614
ES.19698.3	chr2	+	2715	13	NIC	ENSMUSG00000027168.22	novel	2814	14	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.849836585598797	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTAAGTGTTTTGCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	105505791	105527583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_105505995_105506088_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650_105525802_105526614
ES.19699.1	chr2	-	6757	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	-2	-3707	-2	3707	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCATGGTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	105734911	105527664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.10	chr2	-	1530	9	NIC	ENSMUSG00000027167.12	novel	3048	10	NA	NA	-15	-1416	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	69.1718873531726	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTTTGCCTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	105734843	105532787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105734613
ES.19699.13	chr2	-	1672	11	NNC	ENSMUSG00000027167.12	novel	3048	10	NA	NA	-8	-1416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5906536953656	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTTTGCCTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	105734836	105532787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105533207_105561741_105561855_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.14	chr2	-	1434	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	51	1563	-30	-1563	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGAGTTGTTTCATGA	NA	False	NA	-24	True	AATACA	-28	NA	105734858	105532934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.15	chr2	-	4010	1	Intergenic	novelGene_16347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAACCAGTTAGGAGG	NA	False	NA	NA	False	NA	NA	NA	105572146	105568136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105568100_105572100
ES.19699.16	chr2	-	2493	1	Intergenic	novelGene_16348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCATTTTATTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	105599272	105596779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105596800_105599300
ES.19699.17	chr2	-	4031	1	Intergenic	novelGene_16349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCAGCTTTTTAATAC	NA	False	NA	NA	False	NA	NA	NA	105608645	105604614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105604600_105608600
ES.19699.18	chr2	-	758	1	Intergenic	novelGene_16350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAATATCGAGTACAGT	NA	False	NA	NA	False	AATAAA	-16	NA	105621504	105620746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105620700_105621500
ES.19699.19	chr2	-	3979	6	ISM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	59	110009	-22	-18957	5prime_fragment	FALSE	canonical	3	175	junction_1	21.7678662252413	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTTGTGTATAAAGGA	NA	False	NA	NA	False	NA	NA	NA	105734850	105641380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.2	chr2	-	3911	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	55	-918	-26	918	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCTTTTTATTT	NA	False	NA	NA	False	AGTAAA	-12	NA	105734854	105530453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.20	chr2	-	2466	6	ISM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	203	111378	122	-20326	5prime_fragment	FALSE	canonical	3	175	junction_1	21.7678662252413	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAAGTTTGAGCATT	NA	False	NA	NA	False	NA	NA	NA	105734706	105642749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.3	chr2	-	3318	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	54	-324	-27	324	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTTACTGCTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	105734855	105531047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.4	chr2	-	3011	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	51	-14	-30	14	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTTGTGATTCATTTT	NA	False	NA	10	True	AATAAA	-44	NA	105734858	105531357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.5	chr2	-	2863	10	NNC	ENSMUSG00000027167.12	novel	3048	10	NA	NA	-40	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	68.1617538753077	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGTACTTTTAATATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	105734868	105531516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734612
ES.19699.7	chr2	-	2389	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	43	616	-38	-616	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCATTTTAAGCAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	105734866	105531987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.19699.8	chr2	-	1601	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	31	1416	31	-1416	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTTTGCCTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	105734878	105532787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ES.197.1	chr1	-	457	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	-58	-54	-58	54	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTTCATAATTACCAAT	NA	False	NA	NA	False	TTTAAA	-35	NA	24652258	24651801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24651800_24652300
ES.197.10	chr1	-	442	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-161	397	-161	-397	mono-exon	FALSE	NA	NA	NA	NA	NA	1446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACCCAACTATCCATAA	NA	False	NA	NA	False	NA	NA	NA	24653893	24653451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24653500_24653900
ES.197.11	chr1	-	290	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-161	549	-161	-549	mono-exon	FALSE	NA	NA	NA	NA	NA	1421	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCAACACTGACTAGT	NA	False	NA	NA	False	NA	NA	NA	24653893	24653603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24653600_24653900
ES.197.12	chr1	-	181	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-162	659	-162	-659	mono-exon	FALSE	NA	NA	NA	NA	NA	1406	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATTCATTACCCCAACA	NA	False	NA	NA	False	ATTAAA	-20	NA	24653894	24653713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24653700_24653900
ES.197.13	chr1	-	689	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	-2	-6	-2	6	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATGAAGCTAAGAGCGT	NA	False	NA	NA	False	ACTAAA	-38	NA	24654648	24653959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24654000_24654600
ES.197.14	chr1	-	488	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	55	138	55	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAGTAACATCAAACCG	NA	False	NA	NA	False	ACTAAA	-5	NA	24654591	24654103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24654100_24654600
ES.197.15	chr1	-	136	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	0	545	0	-545	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACAACAAAACTAACACAT	NA	False	NA	NA	False	NA	NA	NA	24654646	24654510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24654500_24654600
ES.197.2	chr1	-	1939	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	-841	-315	-841	315	mono-exon	FALSE	NA	NA	NA	NA	NA	2211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCTCTACTATAATAAT	NA	False	NA	NA	False	NA	NA	NA	24653893	24651954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652000_24653900
ES.197.3	chr1	-	2170	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	-1338	-49	-1338	49	mono-exon	FALSE	NA	NA	NA	NA	NA	2441	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACCCAGAAGAGAGTA	NA	False	NA	-126	True	AATATA	-26	NA	24654390	24652220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652200_24654400
ES.197.4	chr1	-	598	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	88	97	88	-97	mono-exon	FALSE	NA	NA	NA	NA	NA	776	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCACTTCGGATTTG	NA	False	NA	NA	False	ACTAAA	-16	NA	24652964	24652366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652400_24653000
ES.197.5	chr1	-	1398	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-161	-559	-161	559	mono-exon	FALSE	NA	NA	NA	NA	NA	2095	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTTCAGATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	24653893	24652495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652500_24653900
ES.197.6	chr1	-	184	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	161	438	161	-438	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTCCAACAGGAATTTC	NA	False	NA	NA	False	NA	NA	NA	24652891	24652707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652700_24652900
ES.197.7	chr1	-	1039	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-161	-200	-161	200	mono-exon	FALSE	NA	NA	NA	NA	NA	2028	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGGCCACCACACTCC	NA	False	NA	NA	False	AATATA	-35	NA	24653893	24652854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24652900_24653900
ES.197.8	chr1	-	891	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-209	-4	-209	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1936	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCACCAAACTCATGCAT	NA	False	NA	NA	False	AATACA	-5	NA	24653941	24653050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24653000_24653900
ES.197.9	chr1	-	531	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	-56	203	-56	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	1478	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTACAGCTAACATTACT	NA	False	NA	NA	False	NA	NA	NA	24653788	24653257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24653300_24653800
ES.1970.1	chr1	+	2567	18	NNC	ENSMUSG00000026504.18	novel	2776	18	NA	NA	205	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	4.29693702770581	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGAGTTGTTCCGT	NA	False	NA	2	True	AATAAA	-12	NA	176642430	176847998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681470_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ES.1970.2	chr1	+	3329	14	NNC	ENSMUSG00000026504.18	novel	2971	17	NA	NA	205	-33402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	4.72560693951005	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTCTCTTGTTCGGA	NA	False	NA	NA	False	AATAAA	-24	NA	176642430	176750524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747587_176749281
ES.1970.3	chr1	+	3157	14	ISM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	221	72909	221	-8832	5prime_fragment	FALSE	canonical	1	6	junction_6	3.77942107585792	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGTTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	176642446	176775094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673
ES.1970.4	chr1	+	2123	15	NIC	ENSMUSG00000026504.18	novel	2776	18	NA	NA	247	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	4.56249126362037	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTTGTTCCGTTTCC	NA	False	NA	6	True	AATAAA	-16	NA	176642472	176848002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ES.1970.5	chr1	+	3146	18	NNC	ENSMUSG00000026504.18	novel	2776	18	NA	NA	247	973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	4.36722616312249	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGTTGTAGAGGTCAC	NA	False	NA	NA	False	AATAAA	-29	NA	176642472	176848976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176848036
ES.19700.1	chr2	+	3248	1	Genic_Genomic	ENSMUSG00000042670.6	novel	NA	NA	NA	NA	-3	-57676	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGTTTGAGGCCAGT	NA	False	NA	NA	False	NA	NA	NA	105734979	105738227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_105735000_105738200
ES.19700.2	chr2	+	886	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	1	68	1	-68	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTGACCCAAAACAAA	NA	False	NA	86	True	AGTAAA	-42	NA	105734983	105795835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ES.19700.3	chr2	+	712	6	NIC	ENSMUSG00000042670.6	novel	955	7	NA	NA	11	-98	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	170.067516004674	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATATATATTAAGTAAAA	NA	False	NA	56	True	AGTAAA	-12	NA	105734993	105795805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_105735076_105738668_105738775_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ES.19700.4	chr2	+	886	8	NNC	ENSMUSG00000042670.6	novel	955	7	NA	NA	15	-135	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	207.269813311548	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGTTTTAAATATAAG	NA	False	NA	19	True	AATAAA	-20	NA	105734997	105795768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105794956_105795038_105795608
ES.19700.5	chr2	+	895	8	NNC	ENSMUSG00000042670.6	novel	955	7	NA	NA	44	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	203.451944885152	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGTTTTAAATATAAG	NA	False	NA	19	True	AATAAA	-20	NA	105735026	105795768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105768351_105768471_105794524_105794636_105795608
ES.19700.6	chr2	+	704	7	NNC	ENSMUSG00000042670.6	novel	955	7	NA	NA	51	-141	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	164.760853630008	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATTTATGTTTTAAA	NA	False	NA	13	True	AATAAA	-14	NA	105735033	105795762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794583_105794636_105795608
ES.19700.7	chr2	+	5340	1	Intergenic	novelGene_16351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAACAGTGCTGGAA	NA	False	NA	NA	False	NA	NA	NA	105784598	105789938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_105784600_105789900
ES.19701.1	chr2	-	7811	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	342	-6956	-5	6956	multi-exon	TRUE	canonical	3	201	junction_2	6.37867541108654	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGTTCTGGTGTACAG	NA	False	NA	NA	False	NA	NA	NA	105833552	105790097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.10	chr2	-	914	6	NNC	ENSMUSG00000027166.15	novel	1197	5	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.404141927241	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	False	NA	-7	True	TATAAA	-11	NA	105833584	105797061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833240_105833276_105833438
ES.19701.11	chr2	-	733	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	354	110	7	-35	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGACTTGAATAATAT	NA	False	NA	NA	False	NA	NA	NA	105833540	105797163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.2	chr2	-	3905	1	Intergenic	novelGene_16352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTGCAGGGTGATTA	NA	False	NA	NA	False	NA	NA	NA	105794155	105790250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_105790200_105794200
ES.19701.3	chr2	-	2419	4	NIC	ENSMUSG00000027166.15	novel	1197	5	NA	NA	25	1602	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	89.3395520223577	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAGAAATTCAGTTTAG	NA	False	NA	NA	False	AATAAA	-33	NA	105833583	105795451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105797440_105811326_105811466_105832273_105832421_105833438
ES.19701.4	chr2	-	2489	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	310	-1602	24	1602	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAGAAATTCAGTTTAG	NA	False	NA	NA	False	AATAAA	-33	NA	105833584	105795451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.5	chr2	-	2220	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	292	-1315	6	1315	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTTCAACTGTAGTAA	NA	False	NA	NA	False	AATAAA	-28	NA	105833602	105795738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.6	chr2	-	1278	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	297	-378	11	378	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGTGAGCCCAGTT	NA	False	NA	NA	False	NA	NA	NA	105833597	105796675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.7	chr2	-	913	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	276	8	-10	-8	multi-exon	FALSE	canonical	3	201	junction_2	6.37867541108654	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	False	NA	-7	True	TATAAA	-11	NA	105833618	105797061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ES.19701.8	chr2	-	688	3	FSM	ENSMUSG00000027166.15	ENSMUST00000151581.2	339	3	-54	-295	7	-8	multi-exon	FALSE	canonical	0	0	junction_1	102.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	False	NA	-7	True	TATAAA	-11	NA	105833601	105797061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_105797440_105832273_105832421_105833438
ES.19701.9	chr2	-	866	4	NIC	ENSMUSG00000027166.15	novel	1197	5	NA	NA	-32	-8	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	89.3395520223577	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	False	NA	-7	True	TATAAA	-11	NA	105833640	105797061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_105797440_105811326_105811466_105832273_105832421_105833438
ES.19702.1	chr2	+	2847	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	-2	3	-2	-3	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGTGCTGCGTGGTTG	NA	False	NA	NA	False	AATAAA	-15	NA	106523611	106698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
ES.19702.2	chr2	+	2566	7	NIC	ENSMUSG00000016386.16	novel	2848	7	NA	NA	193	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	10.5105766836184	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGTGCTGCGTGGTTG	NA	False	NA	NA	False	AATAAA	-15	NA	106523806	106698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_106524167_106529632_106529881_106604919_106605016_106613977_106614204_106691832_106691949_106694999_106695114_106697292
ES.19702.3	chr2	+	1270	6	NIC	ENSMUSG00000016386.16	novel	2848	7	NA	NA	239	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.53729521405309	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106523852	106697544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_106524167_106529632_106529881_106613977_106614204_106691832_106691949_106694999_106695114_106697292
ES.19702.4	chr2	+	1290	5	NNC	ENSMUSG00000016386.16	novel	2848	7	NA	NA	284	-29515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.46684711093805	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTATGCCTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	106523897	106667861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106667496
ES.19702.5	chr2	+	2093	5	NIC	ENSMUSG00000016386.16	novel	2848	7	NA	NA	3451	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.6154368727811	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGTGCTGCGTGGTTG	NA	False	NA	NA	False	AATAAA	-15	NA	106529649	106698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_106529881_106613977_106614204_106691832_106691949_106694999_106695114_106697292
ES.19702.6	chr2	+	793	1	Intergenic	novelGene_16354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAAGGATGTGCTCACG	NA	False	NA	NA	False	NA	NA	NA	106660919	106661712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_106660900_106661700
ES.19703.1	chr2	-	195	1	Intergenic	novelGene_16353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAACCAAAATATT	NA	False	NA	NA	False	NA	NA	NA	106657937	106657742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_106657700_106657900
ES.19704.1	chr2	+	2338	1	Antisense	novelGene_ENSMUSG00000027122.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACTCAAGGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	106799428	106801766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_106799400_106801800
ES.19705.1	chr2	-	3873	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-11	1	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTACTGTTTATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	106804753	106792870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
ES.19705.10	chr2	-	5559	3	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	57	-89	intron_retention	FALSE	canonical	3	182	junction_2	22.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106804685	106792960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106795992_106797444_106799904_106804616
ES.19705.12	chr2	-	4658	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	67	-89	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	101.109779447885	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106804675	106792960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106803112
ES.19705.13	chr2	-	5500	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1162	-89	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106798460	106792960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106793000_106798500
ES.19705.14	chr2	-	3847	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	58	-89	intron_retention	FALSE	canonical	0	0	junction_3	116.998575489904	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106804684	106792960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804483
ES.19705.15	chr2	-	3810	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	27	-89	intron_retention	FALSE	canonical	0	0	junction_1	110.673694555963	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGCTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	106804715	106792960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797379_106797573_106799416_106799904_106804616
ES.19705.16	chr2	-	5232	3	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-10	-92	intron_retention	FALSE	canonical	3	182	junction_2	41.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGCAGGCTTACTGT	NA	False	NA	NA	False	AATAAA	-18	NA	106804752	106792963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106797573_106799416_106799904_106804616
ES.19705.17	chr2	-	3082	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	53	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.623078087608	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAATGCAGGCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	106804689	106792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795137_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ES.19705.19	chr2	-	3521	6	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	58	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.964138351091	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAATGCAGGCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	106804684	106792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106803112_106803508_106804646
ES.19705.2	chr2	-	3373	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	-36	0	-36	0	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804805	106792871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ES.19705.20	chr2	-	3473	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1	-96	intron_retention	FALSE	canonical	1	3	junction_3	115.597001114504	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAATGCAGGCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	106804741	106792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799643_106804646
ES.19705.21	chr2	-	3369	3	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	23	10	intron_retention	FALSE	canonical	3	134	junction_2	65.5	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTTCTTGTCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	106804719	106794763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106797573_106799416_106799904_106804646
ES.19705.22	chr2	-	2003	4	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-9	8	intron_retention	FALSE	canonical	3	182	junction_3	33.9247533357118	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTAATTTTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	106804778	106794765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804616
ES.19705.23	chr2	-	2009	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-46	7	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTAATTTTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	106804815	106794766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
ES.19705.24	chr2	-	1358	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	84	1895	57	7	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTAATTTTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	106804685	106794766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ES.19705.25	chr2	-	4157	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	699	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTAATTTTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	106798923	106794766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106794800_106798900
ES.19705.26	chr2	-	1371	5	NNC	ENSMUSG00000027122.16	novel	1363	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804735	106794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
ES.19705.27	chr2	-	2001	4	NNC	ENSMUSG00000027122.16	novel	1363	5	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_3	116.998575489904	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804651	106794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804483
ES.19705.28	chr2	-	5946	5	NNC	ENSMUSG00000027122.16	novel	1363	5	NA	NA	-11	0	intron_retention	TRUE	non_canonical	0	0	junction_4	101.504925988841	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804780	106794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106802379_106802591
ES.19705.29	chr2	-	3723	3	NNC	ENSMUSG00000027122.16	novel	1363	5	NA	NA	50	0	intron_retention	FALSE	canonical	3	134	junction_2	46.5	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106804692	106794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106799904_106804646
ES.19705.3	chr2	-	3879	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-21	0	intron_retention	FALSE	canonical	3	134	junction_3	55.0292851327566	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804790	106792871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106804646
ES.19705.30	chr2	-	2363	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	-4627	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTGACTGTGCACTTA	NA	False	NA	NA	False	AAAAAG	-4	NA	106804742	106802379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106802400_106804700
ES.19705.4	chr2	-	3646	6	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.964138351091	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804683	106792871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106803112_106803508_106804616
ES.19705.5	chr2	-	3318	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCAGACTTACTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	106804783	106792874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
ES.19705.6	chr2	-	3013	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	99.9262227846124	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAATGCAGACTTAC	NA	False	NA	NA	False	AATAAA	-10	NA	106804715	106792880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799643_106804616
ES.19705.7	chr2	-	3587	4	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	4	-9	intron_retention	FALSE	canonical	3	4	junction_3	115.129878350013	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAATGCAGACTTAC	NA	False	NA	NA	False	AATAAA	-10	NA	106804738	106792880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799643_106804616
ES.19705.8	chr2	-	3298	3	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	-10	-86	intron_retention	FALSE	canonical	0	0	junction_2	113.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGCTTACTGTTTAATT	NA	False	NA	NA	False	AATAAA	-24	NA	106804752	106792957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_106795992_106797444_106797573_106804616
ES.19705.9	chr2	-	4113	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	57	-86	intron_retention	FALSE	canonical	0	0	junction_4	123.483551536227	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGCTTACTGTTTAATT	NA	False	NA	NA	False	AATAAA	-24	NA	106804685	106792957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_106795992_106797444_106797573_106799416_106799904_106803112_106803508_106804616
ES.19706.1	chr2	-	4927	1	Genic_Genomic	ENSMUSG00000052005.9	novel	NA	NA	NA	NA	1507	1524	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	107429377	107424450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_107424400_107429400
ES.19707.1	chr2	-	177	1	Intergenic	novelGene_16355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAGAGCAGGCTGAG	NA	False	NA	NA	False	NA	NA	NA	107698740	107698563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_107698600_107698700
ES.19708.1	chr2	-	158	1	Intergenic	novelGene_16356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108067503	108067345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_108067300_108067500
ES.19709.1	chr2	-	394	1	FSM	ENSMUSG00000083424.4	ENSMUST00000121779.2	333	1	-48	-13	-48	13	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAAAGTAGATTT	NA	False	NA	NA	False	TTTAAA	-13	NA	108705651	108705257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_108705300_108705700
ES.1971.1	chr1	+	157	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	176995152	176995309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_176995200_176995300
ES.19710.1	chr2	+	1717	1	FSM	ENSMUSG00000063684.10	ENSMUST00000121752.2	1428	1	206	-495	206	495	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	8385	False	NA	NA	False	AATAAA	-15	NA	108779356	108781073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_108779400_108781100
ES.19711.1	chr2	+	315	1	Intergenic	novelGene_16357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCTGAGCAAGCCAGGG	NA	False	NA	NA	False	AATAAA	-45	NA	108889566	108889881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_108889600_108889900
ES.19712.1	chr2	-	2844	1	Intergenic	novelGene_16358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTATGTCTGCTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	108918850	108916006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_108916000_108918800
ES.19713.1	chr2	+	577	1	Intergenic	novelGene_16360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109054628	109055205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109054600_109055200
ES.19714.1	chr2	+	3349	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	24	-4	24	4	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTCCTGTTTTATTG	1400	False	NA	29	True	ATTAAA	-20	NA	109111106	109172096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.11	chr2	+	3116	16	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	96.9390644798175	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCCTGTTTTAT	1454	False	NA	27	True	ATTAAA	-18	NA	109111160	109172094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.12	chr2	+	4767	16	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	273	junction_12	41.3134360710895	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	1458	False	NA	22	True	ATTAAA	-13	NA	109111164	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.13	chr2	+	6237	14	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-6	2	intron_retention	FALSE	canonical	3	273	junction_10	43.9860117624823	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCCTGTTTTAT	1458	False	NA	27	True	ATTAAA	-18	NA	109111164	109172094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.14	chr2	+	4328	15	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_11	99.5538004481671	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	1459	False	NA	25	True	ATTAAA	-16	NA	109111165	109172092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.15	chr2	+	3928	16	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	273	junction_13	32.9933326597966	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAACAGTTTGGTTT	1461	False	NA	16	True	ATTAAA	-7	NA	109111167	109172083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164774_109168911_109169022_109171502
ES.19714.16	chr2	+	2948	16	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.3910787609534	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	1464	False	NA	22	True	ATTAAA	-13	NA	109111170	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125329_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.17	chr2	+	9997	17	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	93.2208189931305	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCCTGTTTTAT	1464	False	NA	27	True	ATTAAA	-18	NA	109111170	109172094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109156886_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.2	chr2	+	3687	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	-69	-1653	-43	1653	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGCCGTGGTCATGGTG	1421	False	NA	NA	False	NA	NA	NA	109111127	109142832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
ES.19714.20	chr2	+	1964	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	-19	20	7	-20	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACACAAAAAGAGAAT	1471	False	NA	NA	False	NA	NA	NA	109111177	109141159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
ES.19714.23	chr2	+	2579	13	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	946	1	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_12	85.6684095153452	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTTTCCTGTTTTA	NA	False	NA	26	True	ATTAAA	-17	NA	109123313	109172093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169018_109171502
ES.19714.25	chr2	+	1577	6	ISM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	29807	3	18522	-3	3prime_fragment	FALSE	canonical	3	273	junction_2	60.1079029745673	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	NA	False	NA	22	True	ATTAAA	-13	NA	109140889	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.26	chr2	+	1558	6	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	20324	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	149.324612840616	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	NA	False	NA	22	True	ATTAAA	-13	NA	109142691	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109142797_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.27	chr2	+	11928	3	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	36232	5054	intron_retention	FALSE	canonical	3	327	junction_2	4.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	109158599	109177146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109164774_109168911_109169022_109171502
ES.19714.28	chr2	+	3689	3	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	42432	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	37.5	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	NA	False	NA	25	True	ATTAAA	-16	NA	109164799	109172092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109164924_109166042_109169018_109171502
ES.19714.29	chr2	+	4258	1	NIC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	45464	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	NA	False	NA	22	True	ATTAAA	-13	NA	109167831	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109167800_109172100
ES.19714.3	chr2	+	2956	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	50	363	-38	-363	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCCCATTTCTCAA	1426	False	NA	NA	False	AATAAA	-18	NA	109111132	109171729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.5	chr2	+	3477	18	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	118.977273861447	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTTTCCTGTTTTA	1426	False	NA	26	True	ATTAAA	-17	NA	109111132	109172093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109156886_109157044_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.6	chr2	+	4263	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	51	-945	-37	945	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTGAGTCTGTCTGTA	1427	False	NA	NA	False	AATAAA	-33	NA	109111133	109173037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19714.7	chr2	+	5664	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	-54	-3645	-28	3645	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGCCGTGGTCATGGTG	1436	False	NA	NA	False	NA	NA	NA	109111142	109144824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
ES.19714.8	chr2	+	6057	15	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	75	junction_14	83.6237016006094	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTTGGTTTTCCTGT	1442	False	NA	22	True	ATTAAA	-13	NA	109111148	109172089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169018_109171502
ES.19714.9	chr2	+	2869	17	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	-11	-342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.3715231147617	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGTATGCTTGAAAAT	1453	False	NA	NA	False	AATAAA	-39	NA	109111159	109171750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127061_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ES.19715.1	chr2	-	1922	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	-31	3	-31	0	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	109108666	108922644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ES.19715.2	chr2	-	1812	6	NIC	ENSMUSG00000057234.10	novel	1894	6	NA	NA	74	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.3891272223561	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTATTTATTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	109110973	108922645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109110953
ES.19715.3	chr2	-	109	1	Intergenic	novelGene_16359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATCTGTATTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	108954182	108954073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_108954100_108954200
ES.19715.4	chr2	-	1251	4	NNC	ENSMUSG00000057234.10	novel	646	3	NA	NA	-487	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGCTTTTGGCCATG	NA	False	NA	NA	False	NA	NA	NA	109111580	109070520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_109070762_109099944_109100068_109104733_109105021_109110980
ES.19716.1	chr2	-	172	1	Intergenic	novelGene_16361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGATTGGAGATT	NA	False	NA	NA	False	NA	NA	NA	109203494	109203322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_109203300_109203500
ES.19717.1	chr2	+	2941	2	Intergenic	novelGene_16362	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGAGCGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	109245627	109251307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109245712_109248450
ES.19718.1	chr2	+	4415	1	Intergenic	novelGene_16363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCGAGTGTGCAAAG	NA	False	NA	NA	False	AATAAA	-13	NA	109338313	109342728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109338300_109342700
ES.19719.1	chr2	+	4001	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	10	-38	10	38	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTCTGGGGGTTCTGG	NA	False	NA	NA	False	AATATA	-13	NA	109523917	109557390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109524255_109553726
ES.19719.2	chr2	+	1449	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	17	2507	17	-2507	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	109523924	109554845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109524255_109553726
ES.19719.3	chr2	+	1809	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	55	2109	55	-2109	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAATGCTCACACTC	NA	False	NA	NA	False	AATAAA	-13	NA	109523962	109555243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109524255_109553726
ES.19719.4	chr2	+	3851	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	56	66	56	-66	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCTATTGTAAATACAG	NA	False	NA	NA	False	ATTAAA	-15	NA	109523963	109557286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109524255_109553726
ES.1972.1	chr1	-	1525	1	Antisense	novelGene_ENSMUSG00000103367.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTACTGGCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	176663714	176662189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_176662200_176663700
ES.19720.1	chr2	+	161	1	Intergenic	novelGene_16364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	109591427	109591588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109591400_109591600
ES.19721.1	chr2	+	236	1	Intergenic	novelGene_16365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGTCACATATCAGA	5615	False	NA	NA	False	NA	NA	NA	109699227	109699463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109699200_109699500
ES.19722.1	chr2	+	4255	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	-27	0	-27	0	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109721170	109731348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.10	chr2	+	3657	6	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	-8	-210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	153.70543256502	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTATTTGTATGAGTC	NA	False	NA	25	True	ATTAAA	-22	NA	109721206	109731138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590_109728733_109729084
ES.19722.11	chr2	+	5018	4	FSM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	-8	-4264	-8	-1	multi-exon	FALSE	canonical	3	366	junction_1	18.4932420089069	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGGGTAATGTGGTT	NA	False	NA	30	True	AGTAAA	-20	NA	109721206	109731347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580
ES.19722.12	chr2	+	4859	21	Fusion	ENSMUSG00000027162.8_ENSMUSG00000050199.14	novel	4228	5	NA	NA	-7	-2	multi-exon	FALSE	canonical	0	0	junction_4	116.482391373117	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATTGAAAACTGTTTT	NA	False	NA	38	True	ATTAAA	-20	NA	109721207	109844600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.13	chr2	+	2784	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	17	1427	0	-1427	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATAAAGGGTGTTCG	NA	False	NA	NA	False	AATAAA	-11	NA	109721214	109729921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.14	chr2	+	4086	5	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	169.632691424737	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTTCTGTTATTTCA	NA	False	NA	16	True	AGTAAA	-6	NA	109721214	109731333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726681_109727590
ES.19722.15	chr2	+	1912	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	17	2299	0	1966	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGGGCATTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	109721214	109729049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.16	chr2	+	6067	3	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	17	0	0	0	intron_retention	FALSE	canonical	3	366	junction_1	22.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109721214	109731348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109721267_109724809_109724929_109725452
ES.19722.17	chr2	+	3990	5	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	6	-203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.622864450841	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTATGAGTCGTGCTTG	NA	False	NA	32	True	ATTAAA	-29	NA	109721220	109731145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725513_109726580_109726791_109727590
ES.19722.18	chr2	+	3200	5	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	10	-936	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	168.339500712103	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTAGTGTTTTCTCC	NA	False	NA	21	True	AATAAA	-22	NA	109721224	109730412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726726_109727590
ES.19722.19	chr2	+	4159	4	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	3611	1	3594	-1	3prime_fragment	FALSE	canonical	3	354	junction_3	23.7907545067406	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGGGTAATGTGGTT	NA	False	NA	30	True	AGTAAA	-20	NA	109724808	109731347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.2	chr2	+	4107	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	-13	134	-13	-134	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGCCGTGTGTAAAACAAC	NA	False	NA	-39	True	NA	NA	NA	109721184	109731214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.20	chr2	+	129	1	Intergenic	novelGene_16366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109746377	109746506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_109746400_109746500
ES.19722.21	chr2	+	5133	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-73	0	-73	0	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGAAAACTGTTTTTT	NA	False	NA	40	True	ATTAAA	-22	NA	109747918	109844602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.22	chr2	+	4943	16	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	-32	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.5733376539205	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTTATTGAAAACTGT	NA	False	NA	35	True	ATTAAA	-17	NA	109747959	109844597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109748651_109801036_109801109_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.23	chr2	+	3770	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-28	1318	-28	-1318	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGCTAATTTTACCTA	NA	False	NA	NA	False	TATAAA	-11	NA	109747963	109843284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.24	chr2	+	3611	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-27	1476	-27	-1476	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGTATGGCATAGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	109747964	109843126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.25	chr2	+	4299	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	-20	781	-20	-781	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	109747971	109843821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.27	chr2	+	4929	17	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	21.1126998214345	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTTATTGAAAACTGT	NA	False	NA	35	True	ATTAAA	-17	NA	109747991	109844597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109838429_109838546_109838926_109839011_109841595
ES.19722.29	chr2	+	4993	17	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	20.5453005575484	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTTTTTTTTTTGT	NA	False	NA	47	True	ATTAAA	-29	NA	109747993	109844609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109748651_109801036_109801109_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.3	chr2	+	2613	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	-6	1621	-6	-1621	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATAGCTGTTCTTGGTAC	NA	False	NA	NA	False	AATAAA	-21	NA	109721191	109729727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.30	chr2	+	4875	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	18	167	18	-167	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGTTTGTATAAAATGTG	NA	False	NA	NA	False	AATAAA	-27	NA	109748009	109844435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.31	chr2	+	6765	17	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	31	-5	intron_retention	FALSE	canonical	3	53	junction_12	11.930626293284	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTTATTGAAAACTGT	NA	False	NA	35	True	ATTAAA	-17	NA	109748022	109844597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ES.19722.32	chr2	+	5654	4	NIC	ENSMUSG00000050199.14	novel	4988	17	NA	NA	866	-3844	intron_retention	FALSE	canonical	3	53	junction_2	7.58653778449403	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAACATTTCAGTTCAC	NA	False	NA	NA	False	NA	NA	NA	109831738	109840758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109832883_109833798_109834968_109836848_109836921_109837489
ES.19722.33	chr2	+	4577	1	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	5309	-3844	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAACATTTCAGTTCAC	NA	False	NA	NA	False	NA	NA	NA	109836181	109840758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109836200_109840800
ES.19722.4	chr2	+	3299	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	-3	932	-3	-932	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGTTTTCTCCTTCT	NA	False	NA	25	True	AATAAA	-26	NA	109721194	109730416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ES.19722.7	chr2	+	4069	6	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	0	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	153.70543256502	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGATGTCTGTATTTTG	NA	False	NA	29	True	AGTAAA	-33	NA	109721197	109731282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726655_109726747_109726791_109727590
ES.19722.8	chr2	+	1817	3	ISM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	-15	0	2	0	intron_retention	FALSE	canonical	3	366	junction_1	22.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTGAGAGAATCCCAGG	NA	False	NA	NA	False	NA	NA	NA	109721199	109727083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109721267_109724809_109724929_109725452
ES.19722.9	chr2	+	4150	6	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	153.70543256502	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTGTTATTTCAGGG	NA	False	NA	19	True	AGTAAA	-9	NA	109721201	109731336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590_109731081_109731142
ES.19723.1	chr2	-	2511	5	NNC	ENSMUSG00000063751.7	novel	1349	5	NA	NA	-28	999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.22474487139159	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTATTTATCTACAC	NA	False	NA	NA	False	NA	NA	NA	109743692	109731741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_109733607_109738315_109738424_109739724_109739806_109740238_109740469_109743465
ES.19723.2	chr2	-	701	2	NNC	ENSMUSG00000063751.7	novel	1349	5	NA	NA	-28	-7254	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	109743692	109739994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_109740469_109743465
ES.19724.1	chr2	-	3423	1	Intergenic	novelGene_16367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAGCATTTTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	109761177	109757754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_109757800_109761200
ES.19725.10	chr2	+	4097	6	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	16	2263	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	192.585149998643	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAATAAAAACCTA	NA	False	NA	NA	False	AAGAAA	-45	NA	109848177	110005968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_110002795
ES.19725.11	chr2	+	1292	5	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	16	-2	combination_of_known_splicesites	FALSE	canonical	2	25	junction_2	204.541407788252	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTGTACTCTGTTA	NA	False	NA	31	True	AATAAA	-17	NA	109848177	109875007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109870918_109871078_109871605_109871748_109874531
ES.19725.12	chr2	+	3823	4	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	16	2290	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	239.137803136369	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTCTAAATTTTATGT	NA	False	NA	NA	False	AATAAA	-20	NA	109848177	110005995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_110002795
ES.19725.13	chr2	+	2249	7	NIC	ENSMUSG00000027160.17	novel	2240	8	NA	NA	17	-24	intron_retention	FALSE	canonical	2	2	junction_3	223.649775815274	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAACAGTCTTTCT	NA	False	NA	9	True	ATTAAA	-16	NA	109848178	109874985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_109867749_109868622_109870918_109871078_109871605_109871748_109874531
ES.19725.14	chr2	+	1704	8	FSM	ENSMUSG00000027160.17	ENSMUST00000127630.8	2240	8	-146	682	17	-24	multi-exon	FALSE	canonical	2	2	junction_3	236.291846526057	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAACAGTCTTTCT	NA	False	NA	9	True	ATTAAA	-16	NA	109848178	109874985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109867749_109867880_109868424_109868622_109870918_109871078_109871605_109871748_109874531
ES.19725.15	chr2	+	2590	5	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	19	5	intron_retention	FALSE	canonical	3	423	junction_3	42.2936165396151	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTAGAAGTCATTT	NA	False	NA	NA	False	AATAAA	-27	NA	109848180	109875672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871748_109874531
ES.19725.17	chr2	+	3312	5	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	27	1515	27	-863	5prime_fragment	FALSE	canonical	3	423	junction_3	43.0312386528671	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAACTTTAGTA	NA	False	NA	NA	False	AATAAA	-11	NA	109848188	109874146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605
ES.19725.19	chr2	+	1904	8	FSM	ENSMUSG00000027160.17	ENSMUST00000127630.8	2240	8	-136	472	27	1	multi-exon	FALSE	canonical	2	2	junction_3	236.291846526057	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGCATTTATTTATT	NA	False	NA	NA	False	AGTAAA	-29	NA	109848188	109875195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109867749_109867880_109868424_109868622_109870918_109871078_109871605_109871748_109874531
ES.19725.2	chr2	+	1608	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	-5	467	-5	0	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTGCATTTATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	109848156	109875194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ES.19725.20	chr2	+	1465	5	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	2	25	junction_2	204.541407788252	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTTGCATTTATTT	NA	False	NA	NA	False	AGTAAA	-26	NA	109848189	109875192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109870918_109871078_109871605_109871748_109874531
ES.19725.22	chr2	+	1218	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	36	816	36	-164	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAACAGGTACCAAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	109848197	109874845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ES.19725.23	chr2	+	2255	4	NNC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	36	41825	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	239.137803136369	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGTATAGAGTCTATT	NA	False	NA	NA	False	AGTAAA	-12	NA	109848197	109917492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109848560_109852226_109852360_109862676_109862785_109915840
ES.19725.24	chr2	+	1875	5	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	47	-24	intron_retention	FALSE	canonical	3	423	junction_3	42.2936165396151	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAACAGTCTTTCT	NA	False	NA	9	True	ATTAAA	-16	NA	109848208	109874985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871748_109874531
ES.19725.3	chr2	+	1429	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	-2	643	-2	9	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTATTTGCTTGTGT	NA	False	NA	42	True	AATAAA	-28	NA	109848159	109875018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ES.19725.5	chr2	+	2075	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	1	-6	1	0	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATTTTTTTTAGAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	109848162	109875667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ES.19725.7	chr2	+	2126	5	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	423	junction_3	42.2936165396151	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTTTTGCATTTATT	NA	False	NA	NA	False	AGTAAA	-25	NA	109848163	109875191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871748_109874531
ES.19725.8	chr2	+	4173	5	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	11	670	11	-18	intron_retention	FALSE	canonical	3	423	junction_3	43.0312386528671	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACAGTCTTTCTTGTGTT	NA	False	NA	15	True	AATAAA	-1	NA	109848172	109874991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605
ES.19725.9	chr2	+	1371	6	NNC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	16	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	192.585149998643	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAACAGTCTTTCTTGT	NA	False	NA	12	True	ATTAAA	-19	NA	109848177	109874988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874541
ES.19726.1	chr2	-	180	1	Intergenic	novelGene_16368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109862222	109862042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_109862000_109862200
ES.19727.1	chr2	-	6009	27	FSM	ENSMUSG00000074968.12	ENSMUST00000099623.10	6705	27	693	3	142	-3	multi-exon	TRUE	canonical	0	0	junction_2	1.08240363688233	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGCACATGACATTTC	NA	False	NA	-2	True	AATAAA	-16	NA	110780575	110485548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_110488668_110491511_110491618_110491768_110491850_110496176_110496325_110496719_110496873_110498064_110498199_110501463_110501562_110512159_110512218_110513008_110513121_110518605_110518643_110527370_110527536_110527745_110527887_110528282_110528366_110569115_110569177_110576165_110576263_110587282_110587418_110591787_110591910_110599157_110599214_110601280_110601388_110605335_110605468_110611743_110611789_110614009_110614111_110625257_110625417_110693164_110693284_110711149_110711222_110715195_110715391_110780402
ES.19727.2	chr2	-	176	1	Intergenic	novelGene_16369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAATAATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	110492633	110492457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_110492500_110492600
ES.19727.3	chr2	-	178	1	Intergenic	novelGene_16370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTATTACTTTTATT	NA	False	NA	NA	False	NA	NA	NA	110535981	110535803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_110535800_110536000
ES.19727.4	chr2	-	175	1	Intergenic	novelGene_16371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110663677	110663502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_110663500_110663700
ES.19728.1	chr2	+	286	1	Intergenic	novelGene_16372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACTCTTAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	111927804	111928090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_111927800_111928100
ES.19729.1	chr2	+	181	1	Intergenic	novelGene_16373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACTCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	111994408	111994589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_111994400_111994600
ES.1973.1	chr1	-	7626	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-673	-2047	-673	4	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTTTCTCATTTGCT	NA	False	NA	NA	False	AATAAA	-25	NA	177086442	176847634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ES.1973.10	chr1	-	5318	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-647	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	8.63048127861892	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATCTGCTGCTTCTCTGT	NA	False	NA	-17	True	AATAAA	-9	NA	177086416	176849690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930671_176937192_176937305_176958536_176958663_177076241_177076454_177085941
ES.1973.11	chr1	-	5390	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-799	315	-799	-315	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTCACCTCCCTGTAGA	NA	False	NA	1	True	AATAAA	-23	NA	177086568	176849996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ES.1973.12	chr1	-	4668	14	NIC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	2	-322	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	6.65462423196374	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATCGAGTCACCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	177085156	176850003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085014
ES.1973.13	chr1	-	4976	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-618	-324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	6.88536738480008	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTCATCGAGTCACCT	NA	False	NA	-8	True	AATAAA	-14	NA	177086387	176850005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076454_177085941
ES.1973.15	chr1	-	2160	8	NNC	ENSMUSG00000019699.17	novel	1511	13	NA	NA	117745	-47605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7494660522355	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATTATATCGCTCTTT	NA	False	NA	NA	False	AAAAAG	-4	NA	176958588	176897286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176898758_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176947931_176948045_176958536
ES.1973.16	chr1	-	3142	1	FSM	ENSMUSG00000103646.2	ENSMUST00000195379.2	2765	1	-409	32	-409	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	176998837	176995695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_176995700_176998800
ES.1973.3	chr1	-	6814	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	38729	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.63048127861892	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCATGGGTATTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	177037604	176847644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177031921_177031994_177037541
ES.1973.4	chr1	-	5183	16	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-656	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.25321486183145	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATCATGGGTATTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	177086425	176847646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176848319_176850569_176850730_176850892_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ES.1973.5	chr1	-	5011	14	NIC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-13	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	6.65462423196374	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGTTGTTGTTGGAT	NA	False	NA	-2	True	AATAAA	-24	NA	177085171	176849675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085014
ES.1973.6	chr1	-	5679	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-773	0	-773	0	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTCTGTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-18	NA	177086542	176849681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ES.1973.7	chr1	-	4941	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-694	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	6.42664571514013	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTCTGTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-18	NA	177086463	176849681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177086370
ES.1973.8	chr1	-	4940	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	-981	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.88536738480008	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTCTGTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-18	NA	177086750	176849681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177086658
ES.1973.9	chr1	-	4957	14	NNC	ENSMUSG00000019699.17	novel	4906	14	NA	NA	191	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	6.65462423196374	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTCTCTGTTTGTTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	177085578	176849682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085468
ES.19730.1	chr2	+	175	1	Intergenic	novelGene_16374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTTA	NA	False	NA	NA	False	NA	NA	NA	112021646	112021821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112021600_112021800
ES.19731.1	chr2	+	142	1	Intergenic	novelGene_16375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112066446	112066588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112066400_112066600
ES.19732.1	chr2	+	176	1	Intergenic	novelGene_16376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTATT	NA	False	NA	NA	False	NA	NA	NA	112067615	112067791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112067600_112067800
ES.19733.1	chr2	+	2317	14	NNC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	-84	-23	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	19.1777731305937	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAACCTGAAGC	NA	False	NA	NA	False	NA	NA	NA	112069728	112077433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073064_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.2	chr2	+	2009	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	269	-3	269	3	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGTGGAATCATTAGT	NA	False	NA	NA	False	NA	NA	NA	112070081	112077459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.3	chr2	+	2216	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	356	-297	356	297	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACAGTCCCACGGAGA	NA	False	NA	NA	False	NA	NA	NA	112070168	112077753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.4	chr2	+	2030	13	NIC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	357	0	intron_retention	FALSE	canonical	3	65	junction_4	5.90374175135284	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070169	112077456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.5	chr2	+	1743	13	NIC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	366	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.5487225880345	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAACCTGAAGC	NA	False	NA	NA	False	NA	NA	NA	112070178	112077433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112070403_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.6	chr2	+	3538	12	NIC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	384	0	intron_retention	FALSE	canonical	3	65	junction_4	5.92096708652138	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112070196	112077456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.7	chr2	+	3604	7	NIC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	-253	-3	intron_retention	FALSE	canonical	3	65	junction_4	6.37704215656966	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCAGAGGGTGGAATC	NA	False	NA	NA	False	NA	NA	NA	112071576	112077453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112072491_112072820_112073408_112073603_112074241_112074327_112075141_112076140_112076240_112076619_112076777_112077056
ES.19733.8	chr2	+	3944	5	NIC	ENSMUSG00000027134.5	novel	2275	14	NA	NA	60	-2	intron_retention	FALSE	canonical	3	65	junction_3	7.48331477354788	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCAGAGGGTGGAATCA	NA	False	NA	NA	False	NA	NA	NA	112071889	112077454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112074241_112074327_112074411_112074664_112075141_112076140_112076777_112077056
ES.19733.9	chr2	+	1149	9	ISM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	3534	0	1030	0	3prime_fragment	FALSE	canonical	3	65	junction_6	6.52758569457345	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112073346	112077456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ES.19734.1	chr2	-	3274	6	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3254	0	3254	0	3prime_fragment	FALSE	canonical	0	0	junction_5	0.979795897113271	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTATGTGCTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	112086382	112078292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_112080525_112080903_112081021_112081389_112081668_112082080_112082221_112083846_112083976_112086004
ES.19735.1	chr2	+	509	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	1	599	1	-599	multi-exon	FALSE	canonical	3	3938	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTTGTTGGAGG	NA	False	NA	28	True	ATTAAA	-22	NA	112092271	112093015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112092423_112092657
ES.19735.10	chr2	+	6697	25	FSM	ENSMUSG00000027130.16	ENSMUST00000028549.14	6105	25	-1237	645	-243	-645	multi-exon	FALSE	canonical	3	33	junction_1	16.1464112799787	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGCACCTTAGGGGA	NA	False	NA	NA	False	AATAAA	-22	NA	112095926	112192856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.11	chr2	+	6166	26	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-233	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.6163738496123	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGTTGTGCTGTAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	112095936	112193503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174581_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.12	chr2	+	7290	24	NIC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-232	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.1293477952058	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112095937	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.13	chr2	+	7289	25	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-231	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.4421084742431	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTTGTGCTGTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	112095938	112193502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174215_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.16	chr2	+	5535	27	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-182	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0768467642466	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTTGTGCTGTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	112095987	112193502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112096665_112097245_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.17	chr2	+	1718	2	NNC	ENSMUSG00000027130.16	novel	3722	19	NA	NA	-93	-56509	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATGAGTTGGTTCG	NA	False	NA	NA	False	ATTAAA	-15	NA	112096076	112125469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112097438_112125112
ES.19735.18	chr2	+	6791	25	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	33	-1	intron_retention	FALSE	canonical	0	0	junction_24	24.4875251687239	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATAAGTTGTGCTGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	112096202	112193500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.2	chr2	+	6118	27	Fusion	ENSMUSG00000027130.16_ENSMUSG00000027133.4	novel	4464	4	NA	NA	15	0	multi-exon	FALSE	canonical	0	0	junction_2	741.020194727568	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCTGTAGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112092285	112193508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_112092423_112092657_112092763_112128276_112128315_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.20	chr2	+	6430	26	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-285	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.0283166285115	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112096801	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112096904_112096944_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.21	chr2	+	3678	20	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	-3	532	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	20.9381095644512	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACAATGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	112114918	112187764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112115151_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804
ES.19735.22	chr2	+	6063	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	1	-4	1	-3	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112114922	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.23	chr2	+	4873	26	NNC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	24	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	22.8607611421842	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112114945	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.24	chr2	+	5994	24	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	24	3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	19.8360958717408	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112114945	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112115151_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.25	chr2	+	6932	24	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	25	-2	intron_retention	FALSE	canonical	3	47	junction_1	14.4160433628019	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGCTGTAGTTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	112114946	112193506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.26	chr2	+	6013	24	NNC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_23	23.6877130697032	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGCTGTAGTTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	112114949	112193506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.27	chr2	+	5796	23	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	28	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	23.7730314598999	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112114949	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112188112_112188298_112188850_112188985_112190760
ES.19735.28	chr2	+	5382	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	30	648	30	-648	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAAATGCACCTTAGG	NA	False	NA	NA	False	AATAAA	-19	NA	112114951	112192853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.29	chr2	+	4533	26	NNC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	28.3336125476438	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTTGTGCTGTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	112114953	112193502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188973_112189262_112189301_112192282
ES.19735.3	chr2	+	4985	27	Fusion	ENSMUSG00000027130.16_ENSMUSG00000027133.4	novel	4464	4	NA	NA	42	-3	multi-exon	FALSE	canonical	0	0	junction_2	741.020194727568	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112092312	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_112092423_112092657_112092864_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760_112191117_112192282
ES.19735.30	chr2	+	3687	1	Intergenic	novelGene_16377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112122460	112126147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112122500_112126100
ES.19735.31	chr2	+	5792	23	ISM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	48803	-3	-13615	3	3prime_fragment	FALSE	canonical	3	74	junction_1	9.94499334147507	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112163724	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.32	chr2	+	4109	22	NNC	ENSMUSG00000027130.16	novel	4556	25	NA	NA	-12577	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	22.2563909647434	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGTTGTGCTGTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	112164762	112193502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188973_112192282
ES.19735.33	chr2	+	6457	20	NIC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-11221	-3	intron_retention	FALSE	canonical	3	78	junction_7	8.96407109728159	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112166118	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.34	chr2	+	5558	21	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-11221	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.8667334790083	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATAAGTTGTGCTGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	112166118	112193500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112166268_112167702_112167756_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.35	chr2	+	5362	19	ISM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	53280	-3	-9138	3	3prime_fragment	FALSE	canonical	3	78	junction_5	9.09704198294732	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112168201	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.36	chr2	+	2984	16	NNC	ENSMUSG00000027130.16	novel	4556	25	NA	NA	-2793	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.3528765008212	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112174546	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185389_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188973_112189262_112189301_112192282
ES.19735.37	chr2	+	3620	8	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	515	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.830667516722	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112183385	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112183406_112184518_112184715_112185389_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.38	chr2	+	174	1	ISM	ENSMUSG00000027130.16	ENSMUST00000137896.2	4464	4	27	6768	27	366	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCACTTTTTC	NA	False	NA	NA	False	NA	NA	NA	112186566	112186740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112186600_112186700
ES.19735.39	chr2	+	4954	3	ISM	ENSMUSG00000027130.16	ENSMUST00000137896.2	4464	4	1283	3	1283	-3	intron_retention	FALSE	canonical	3	102	junction_2	3.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112187822	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112187937_112188112_112188298_112188850
ES.19735.4	chr2	+	696	1	NIC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	42	-606	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCATTTTGTGTGTTG	NA	False	NA	21	True	ATTAAA	-15	NA	112092312	112093008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112092300_112093000
ES.19735.40	chr2	+	1387	2	NNC	ENSMUSG00000027130.16	novel	4556	25	NA	NA	2596	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112189135	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112189301_112192282
ES.19735.5	chr2	+	6050	26	Fusion	ENSMUSG00000027130.16_ENSMUSG00000027133.4	novel	4464	4	NA	NA	42	-3	multi-exon	FALSE	canonical	0	0	junction_2	754.168734435471	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112092312	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_112092423_112092657_112092763_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.6	chr2	+	373	2	NNC	ENSMUSG00000027133.4	novel	1109	2	NA	NA	47	-606	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCATTTTGTGTGTTG	NA	False	NA	21	True	ATTAAA	-15	NA	112092317	112093008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112092340_112092657
ES.19735.7	chr2	+	6142	26	Fusion	ENSMUSG00000027130.16_ENSMUSG00000027133.4	novel	4464	4	NA	NA	50	3	multi-exon	FALSE	canonical	0	0	junction_2	754.168734435471	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGTGCTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	112092320	112193504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_112092423_112092657_112092864_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.8	chr2	+	7366	25	FSM	ENSMUSG00000027130.16	ENSMUST00000028549.14	6105	25	-1257	-4	-263	-3	multi-exon	FALSE	canonical	3	33	junction_1	16.1464112799787	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112095906	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ES.19735.9	chr2	+	6198	26	NNC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-250	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	35.1111606188118	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTGCTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	112095919	112193505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112180375_112180484_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760_112191065_112192282
ES.19736.1	chr2	+	3137	11	NIC	ENSMUSG00000096764.2	novel	4532	28	NA	NA	110677	7921	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	202.566532280138	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112207335	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112207631_112207722_112207826_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.10	chr2	+	1118	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	7	-2805	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	161.88984213858	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTGTATAGTGCATT	NA	False	NA	NA	False	AATAAA	-16	NA	112209562	112241780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112241683
ES.19736.11	chr2	+	2754	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	170.123806020792	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209568	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.12	chr2	+	6602	7	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	-5	intron_retention	FALSE	canonical	3	424	junction_6	55.8671539358225	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209570	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238779_112238868_112238959_112239485
ES.19736.13	chr2	+	6020	7	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	-907	intron_retention	FALSE	canonical	3	424	junction_5	47.2631521965638	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGCTTTTTTAATT	NA	False	NA	NA	False	AGTAAA	-16	NA	112209570	112243678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112238779_112238868_112238959_112239485_112239576_112240487
ES.19736.14	chr2	+	2981	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	208.248130725386	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209570	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238605_112238779_112238875_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.16	chr2	+	3276	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	15	-405	0	405	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATTGTTTTAACAGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	112209570	112244990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.18	chr2	+	5404	5	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	1	-905	intron_retention	FALSE	canonical	3	500	junction_1	33.446786093734	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTTTAATTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	112209571	112243680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112240582_112242727
ES.19736.19	chr2	+	5147	7	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	1	-908	intron_retention	FALSE	canonical	3	424	junction_4	46.9447074285862	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTTGCTTTTTTAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	112209571	112243677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.2	chr2	+	2019	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-39	906	-39	-906	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCTTTTTTAATTC	NA	False	NA	NA	False	AGTAAA	-17	NA	112209516	112243679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.20	chr2	+	2929	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	163.215906390172	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209572	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235204_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.21	chr2	+	2623	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.383353416776	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209574	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236479_112237930_112238050_112238727_112238779_112238887_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.22	chr2	+	5531	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	5	-8	intron_retention	FALSE	canonical	3	427	junction_4	44.1162656846563	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAAAGAATGTGGTGTG	NA	False	NA	2	True	AATAAA	-12	NA	112209575	112244577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112239576_112240487
ES.19736.23	chr2	+	1550	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	21	1315	6	-1315	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTGTACAAATGCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	112209576	112243270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.24	chr2	+	2863	9	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	172.050455898844	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209576	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238605_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.25	chr2	+	2859	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	164.600826543385	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209576	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240493_112240582_112242727
ES.19736.26	chr2	+	1845	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	-1140	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	161.084365596125	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAATTTTTAGCATCTC	NA	False	NA	NA	False	AATATA	-23	NA	112209578	112243445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238605_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.27	chr2	+	3001	11	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	204.509168498627	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	7	True	AATAAA	-17	NA	112209578	112244582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112211684_112211826_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.28	chr2	+	2849	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_9	158.58712603238	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209578	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240568_112242727
ES.19736.29	chr2	+	3069	11	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	204.509657473675	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209578	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112224828_112225040_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.3	chr2	+	1598	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-31	-1317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.383500824213	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTGTGTACAAATGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	112209524	112243268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234626_112235108_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.30	chr2	+	4813	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	424	junction_5	51.167591784054	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	7	True	AATAAA	-17	NA	112209578	112244582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112236699_112237930_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.31	chr2	+	2693	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	182.026237175876	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209578	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.32	chr2	+	5448	11	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	9	8997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	156.792346752002	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTAACCTTTGTCCGT	NA	False	NA	NA	False	ATTAAA	-21	NA	112209579	112253582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727_112247025_112253435
ES.19736.33	chr2	+	2634	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	10	-905	intron_retention	FALSE	canonical	3	424	junction_6	48.6208224426531	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTTTAATTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	112209580	112243680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.34	chr2	+	2781	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	164.058781997848	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAATGTGGTGTGCATA	NA	False	NA	6	True	AATAAA	-16	NA	112209580	112244581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234581_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.35	chr2	+	2846	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	162.261410791657	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209583	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238875_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.36	chr2	+	2973	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	161.084365596125	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209585	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238605_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.37	chr2	+	3974	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	18	-906	intron_retention	FALSE	canonical	1	7	junction_4	179.956230506085	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCTTTTTTAATTC	NA	False	NA	NA	False	AGTAAA	-17	NA	112209588	112243679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487
ES.19736.38	chr2	+	2864	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	165.065493922717	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209592	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237915_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.39	chr2	+	3509	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	35	-5	intron_retention	FALSE	canonical	3	424	junction_6	48.6208224426531	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAATGTGGTGTGCAT	NA	False	NA	5	True	AATAAA	-15	NA	112209605	112244580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.4	chr2	+	2915	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-28	-1	-28	1	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTGCATAGTTTA	NA	False	NA	11	True	AATAAA	-21	NA	112209527	112244586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.40	chr2	+	2737	9	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	24949	3	24934	-3	3prime_fragment	FALSE	canonical	3	424	junction_6	50.2959988468268	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	7	True	AATAAA	-17	NA	112234504	112244582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.5	chr2	+	1783	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-23	-906	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	163.540533730447	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCTTTTTTAATTC	NA	False	NA	NA	False	AGTAAA	-17	NA	112209532	112243679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236479_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.6	chr2	+	4803	8	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	424	junction_5	43.7712047737658	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209548	112244585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.7	chr2	+	3705	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	-2	-817	-2	817	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGGTGGTGATACAAGC	NA	False	NA	NA	False	AATAAA	-19	NA	112209553	112245402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ES.19736.9	chr2	+	3782	9	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_8	172.371691411322	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTGGTGTGCATAG	NA	False	NA	7	True	AATAAA	-17	NA	112209560	112244582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727_112243239_112244244
ES.19737.1	chr2	-	3346	1	Antisense	novelGene_ENSMUSG00000027130.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAACAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	112115285	112111939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_112111900_112115300
ES.19738.1	chr2	-	5679	1	Intergenic	novelGene_16378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAAGTTCTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	112155826	112150147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112150100_112155800
ES.19739.1	chr2	-	3146	1	Antisense	novelGene_ENSMUSG00000096764.2_AS_novelGene_ENSMUSG00000027130.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGAACTCACTTTGTA	NA	False	NA	NA	False	NA	NA	NA	112169829	112166683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_112166700_112169800
ES.1974.1	chr1	+	159	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATACATACAT	NA	False	NA	NA	False	NA	NA	NA	177186237	177186396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_177186200_177186400
ES.19740.1	chr2	-	1541	6	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	-11560	5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	326.638270874679	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCCCCTTCAGTCTACT	NA	False	NA	0	True	AATAAA	-34	NA	112209932	112193350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163_112198404_112209410
ES.19740.10	chr2	-	761	4	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	16	-14	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	391.066064325028	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCTTAATGTTTCACA	5020	False	NA	-19	True	AATAAA	-15	NA	112198349	112193369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112193700_112194136_112194298_112194496_112194581_112198163
ES.19740.11	chr2	-	2660	1	Antisense	novelGene_ENSMUSG00000027132.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112210890	112208230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_112208200_112210900
ES.19740.2	chr2	-	821	5	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	217	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	410.863344069534	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTTTCACAAGTTCC	5221	False	NA	-13	True	AATAAA	-21	NA	112198148	112193363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112193700_112194136_112194298_112194496_112194581_112197746_112197862_112198023
ES.19740.3	chr2	-	1558	3	NNC	ENSMUSG00000027131.4	novel	700	4	NA	NA	54	-8	intron_retention	FALSE	canonical	2	9	junction_1	412.5	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTTTCACAAGTTCC	5058	False	NA	-13	True	AATAAA	-21	NA	112198311	112193363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112194651_112197738_112197862_112198163
ES.19740.4	chr2	-	4498	3	NIC	ENSMUSG00000027131.4	novel	700	4	NA	NA	3	-8	intron_retention	FALSE	canonical	3	834	junction_2	3	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTTTCACAAGTTCC	5007	False	NA	-13	True	AATAAA	-21	NA	112198362	112193363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_112194298_112194496_112197862_112198163
ES.19740.6	chr2	-	3907	4	NNC	ENSMUSG00000027131.4	novel	700	4	NA	NA	42	-10	intron_retention	FALSE	non_canonical	0	0	junction_2	394.573187127559	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAATGTTTCACAAGTT	5046	False	NA	-15	True	AATAAA	-19	NA	112198323	112193365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112194298_112194496_112194920_112195469_112197862_112198163
ES.19740.7	chr2	-	4352	3	ISM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	19	10	12	-10	intron_retention	FALSE	canonical	3	827	junction_1	6.5	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAATGTTTCACAAGTT	5016	False	NA	-15	True	AATAAA	-19	NA	112198353	112193365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_112193700_112194136_112194298_112194496
ES.19740.8	chr2	-	4700	2	NIC	ENSMUSG00000027131.4	novel	700	4	NA	NA	-2	-10	intron_retention	FALSE	canonical	3	834	junction_1	0	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAATGTTTCACAAGTT	5002	False	NA	-15	True	AATAAA	-19	NA	112198367	112193365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_112197862_112198163
ES.19740.9	chr2	-	893	5	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	7	-14	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	352.791014624806	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCTTAATGTTTCACA	5011	False	NA	-19	True	AATAAA	-15	NA	112198358	112193369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_112193700_112194136_112194298_112194496_112194581_112197738_112197862_112198163
ES.19741.1	chr2	-	2058	1	FSM	ENSMUSG00000081541.2	ENSMUST00000121023.2	301	1	-368	-1389	-368	1389	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112220210	112218152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_112218200_112220200
ES.19742.1	chr2	-	2924	2	Antisense	novelGene_ENSMUSG00000027132.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAAAATTCTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	112229355	112226376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_112227422_112227476
ES.19742.2	chr2	-	1850	1	Intergenic	novelGene_16379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	112229355	112227505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112227500_112229400
ES.19742.3	chr2	-	181	1	Intergenic	novelGene_16380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	112228542	112228361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112228400_112228500
ES.19743.1	chr2	-	4053	1	Intergenic	novelGene_16381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCATAAGTTCTGTGAC	8177	False	NA	NA	False	NA	NA	NA	112251119	112247066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112247100_112251100
ES.19744.1	chr2	+	196	1	Intergenic	novelGene_16382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTCAACTCACTTCTCT	3263	False	NA	NA	False	NA	NA	NA	112270099	112270295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112270100_112270300
ES.19745.1	chr2	+	1102	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	3	4721	3	-4721	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTATCTTCTGTTTTTCT	363	False	NA	8	True	ATTAAA	-21	NA	112285344	112297786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ES.19745.2	chr2	+	929	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	38	-4726	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	244.590474058169	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGATTATCTTCTGTT	398	False	NA	3	True	ATTAAA	-16	NA	112285379	112297781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112285485_112289804_112289925_112293117_112293285_112295081_112295163_112297325
ES.19745.3	chr2	+	1086	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	39	-4724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	262.498928569242	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGATTATCTTCTGTTTT	399	False	NA	5	True	ATTAAA	-18	NA	112285380	112297783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112285646_112289809_112289925_112293117_112293285_112295081_112295163_112297325
ES.19745.4	chr2	+	5621	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	188.575415948103	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTGTGTGTGTGTGT	399	False	NA	NA	False	AATAAA	-10	NA	112285380	112302502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112285485_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ES.19745.5	chr2	+	895	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	47	-4718	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	200.477398975545	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTCTGTTTTTCTTTA	407	False	NA	11	True	ATTAAA	-24	NA	112285388	112297789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112285485_112289809_112289925_112293145_112293285_112295081_112295163_112297325
ES.19745.6	chr2	+	4224	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	53	-4728	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	219.091305167503	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATAAGATTATCTTCTG	413	False	NA	1	True	ATTAAA	-14	NA	112285394	112297779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112285646_112289804_112291561_112291602_112293285_112295081_112295163_112297325
ES.19745.7	chr2	+	5772	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	54	0	54	0	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTTCATG	414	False	NA	NA	False	AATAAA	-15	NA	112285395	112302507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ES.19745.9	chr2	+	4127	1	NIC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	2061	-10978	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	2421	False	NA	NA	False	NA	NA	NA	112287402	112291529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_112287400_112291500
ES.19746.1	chr2	-	204	1	Intergenic	novelGene_16383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCCAAACTGTCTGTC	NA	False	NA	NA	False	AAAAAG	-4	NA	112292654	112292450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112292400_112292700
ES.19747.1	chr2	+	1604	7	NNC	ENSMUSG00000003604.15	novel	4735	6	NA	NA	-294	343	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	221.124964669302	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTCCTTTCTTCACG	NA	False	NA	5	True	AATAAA	-16	NA	112323014	112461599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_112323106_112323211_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ES.19747.2	chr2	+	1309	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	-63	3489	-63	173	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTGTTATCTGGCT	NA	False	NA	14	True	AATATA	-25	NA	112323245	112461429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ES.19747.3	chr2	+	157	1	Intergenic	novelGene_16387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTACA	6158	False	NA	NA	False	NA	NA	NA	112374254	112374411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112374300_112374400
ES.19748.1	chr2	-	177	1	Intergenic	novelGene_16384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	112325720	112325543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112325500_112325700
ES.19749.1	chr2	-	397	1	Intergenic	novelGene_16385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGAAAACTAGTGAA	NA	False	NA	NA	False	AAAAAG	-26	NA	112342641	112342244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112342200_112342600
ES.19749.2	chr2	-	176	1	Intergenic	novelGene_16386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGTGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	112342646	112342470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_112342500_112342600
ES.1975.1	chr1	+	4157	2	FSM	ENSMUSG00000063659.12	ENSMUST00000195002.2	394	2	-236	-3527	-236	0	multi-exon	FALSE	canonical	3	20	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	7	True	AATAAA	-17	NA	177269680	177278330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177270162_177274654
ES.1975.10	chr1	+	3943	4	NIC	ENSMUSG00000063659.12	novel	335	4	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.59966329107444	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	177269898	177278328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177270162_177270789_177270908_177274654_177275343_177275454
ES.1975.11	chr1	+	2650	3	NIC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-10	-1165	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	2.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGCACTGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	177269906	177277161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177270162_177274654_177275343_177275454
ES.1975.12	chr1	+	3936	2	NNC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCCTTGTGTGCTTTT	NA	False	NA	3	True	AATAAA	-13	NA	177270073	177278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_177270338_177274654
ES.1975.13	chr1	+	2664	2	FSM	ENSMUSG00000063659.12	ENSMUST00000195002.2	394	2	192	-2462	-1	-1061	multi-exon	FALSE	canonical	3	20	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGATAACTTCGCTAC	NA	False	NA	NA	False	AATAAA	-12	NA	177270108	177277265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177270162_177274654
ES.1975.14	chr1	+	3830	2	NIC	ENSMUSG00000063659.12	novel	335	4	NA	NA	331	-1060	intron_retention	FALSE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATAACTTCGCTACA	NA	False	NA	NA	False	AATAAA	-13	NA	177270440	177277266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177271659_177274654
ES.1975.15	chr1	+	4719	4	NIC	ENSMUSG00000063659.12	novel	3734	3	NA	NA	-198	0	intron_retention	FALSE	canonical	1	1	junction_1	6.37704215656966	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCCTTGTGTGCTTTT	NA	False	NA	3	True	AATAAA	-13	NA	177270583	177278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177271659_177272304_177272389_177274654_177275343_177275454
ES.1975.16	chr1	+	5464	2	FSM	ENSMUSG00000063659.12	ENSMUST00000094276.5	4204	2	-1263	3	-184	1	multi-exon	FALSE	canonical	2	2	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTTGTGTGCTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	177270597	177278327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177272389_177274654
ES.1975.17	chr1	+	4012	3	FSM	ENSMUSG00000063659.12	ENSMUST00000193480.2	3734	3	-280	2	78	2	multi-exon	FALSE	canonical	2	2	junction_1	6.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	177271938	177278328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177272389_177274654_177275343_177275454
ES.1975.18	chr1	+	6091	1	FSM	ENSMUSG00000063659.12	ENSMUST00000077225.8	4944	1	-1151	4	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCCTTGTGTGCTTTT	NA	False	NA	3	True	AATAAA	-13	NA	177272235	177278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177272200_177278300
ES.1975.19	chr1	+	4843	2	ISM	ENSMUSG00000063659.12	ENSMUST00000193480.2	3734	3	1148	9	-20	-5	3prime_fragment	FALSE	canonical	3	15	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGAATTCCTTGTGTG	NA	False	NA	-2	True	AATAAA	-8	NA	177273366	177278321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_177275343_177275454
ES.1975.3	chr1	+	4044	3	NNC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAATTCCTTGTGTGCTT	NA	False	NA	1	True	AATAAA	-11	NA	177269851	177278324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_177270338_177274654_177275343_177275454
ES.1975.4	chr1	+	4097	5	NIC	ENSMUSG00000063659.12	novel	335	4	NA	NA	-64	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	6.36396103067893	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	177269852	177278328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177270162_177270789_177270908_177271550_177271659_177274654_177275343_177275454
ES.1975.5	chr1	+	3871	3	NIC	ENSMUSG00000063659.12	novel	646	3	NA	NA	-64	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	2.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	177269852	177278328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177270162_177274654_177275343_177275454
ES.1975.6	chr1	+	3923	4	NNC	ENSMUSG00000063659.12	novel	3734	3	NA	NA	-60	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.64997911442	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTTGTGTGCTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	177269856	177278327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_177270162_177272331_177272389_177274654_177275343_177275454
ES.1975.7	chr1	+	3943	4	NIC	ENSMUSG00000063659.12	novel	3734	3	NA	NA	-53	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.64997911442	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTTGTGTGCTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	177269863	177278327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177270162_177272304_177272389_177274654_177275343_177275454
ES.1975.8	chr1	+	4155	4	NNC	ENSMUSG00000063659.12	novel	335	4	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.84754619472471	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	7	True	AATAAA	-17	NA	177269864	177278330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_177270338_177270789_177270908_177274654_177275343_177275454
ES.1975.9	chr1	+	4057	3	FSM	ENSMUSG00000063659.12	ENSMUST00000195549.6	646	3	-135	-3276	-20	2	multi-exon	FALSE	canonical	1	1	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTTGTGTGCTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	177269896	177278328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_177270162_177270789_177270908_177274654
ES.19750.1	chr2	+	4284	1	Intergenic	novelGene_16388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAGACTATCCGTAAGTT	NA	False	NA	NA	False	NA	NA	NA	112928269	112932553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_112928300_112932600
ES.19751.1	chr2	-	178	1	Intergenic	novelGene_16389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGTAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	113023566	113023388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_113023400_113023600
ES.19752.1	chr2	-	1983	1	Intergenic	novelGene_16390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATCATGCCAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	113170774	113168791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_113168800_113170800
ES.19753.1	chr2	-	3229	1	Intergenic	novelGene_16391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTAAATCTCACGT	NA	False	NA	NA	False	ATTAAA	-9	NA	113259107	113255878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_113255900_113259100
ES.19754.1	chr2	+	4328	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-214	121	-214	0	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCACATTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	113271194	113540079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ES.19754.2	chr2	+	6556	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-133	-2188	-133	2188	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTATAGATTTATTTT	NA	False	NA	NA	False	AAAAAG	-25	NA	113271275	113542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ES.19754.3	chr2	+	5267	13	ISM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	-77	71349	-77	-54645	5prime_fragment	FALSE	canonical	3	8	junction_2	4.40564662929543	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	113271331	113468851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076
ES.19754.4	chr2	+	4226	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	90	-81	90	81	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTTTGAAGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	113271498	113540281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ES.19754.5	chr2	+	3026	1	Intergenic	novelGene_16392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113360244	113363270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_113360200_113363300
ES.19754.6	chr2	+	3074	1	Intergenic	novelGene_16393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAGGAAAAATTATATG	NA	False	NA	NA	False	NA	NA	NA	113426742	113429816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_113426700_113429800
ES.19754.7	chr2	+	3002	5	ISM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	195666	-2180	-48360	2180	3prime_fragment	FALSE	canonical	3	9	junction_2	3.26917420765551	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGTTTCTATAGA	NA	False	NA	NA	False	AAAAAG	-17	NA	113467074	113542380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ES.19754.8	chr2	+	5805	1	ISM	ENSMUSG00000044042.20	ENSMUST00000099576.9	11817	19	383227	0	2292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGTGTGGTGGAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	113541307	113547112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_113541300_113547100
ES.19755.1	chr2	-	2335	3	NNC	ENSMUSG00000087545.2	novel	832	2	NA	NA	51	7123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTTGATTAATGAT	NA	False	NA	NA	False	NA	NA	NA	113272598	113263902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113265785_113271353_113271473_113272264
ES.19755.2	chr2	-	2051	1	Genic_Genomic	ENSMUSG00000085448.2_ENSMUSG00000087545.2	novel	NA	NA	NA	NA	192	619	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113272457	113270406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_113270400_113272500
ES.19756.1	chr2	-	1495	1	Intergenic	novelGene_16394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAATGAGTGGGTAGGG	NA	False	NA	NA	False	NA	NA	NA	113512990	113511495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_113511500_113513000
ES.19757.1	chr2	-	6548	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-56	-1534	-51	1480	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCGTACAGTTTTTGTA	5961	False	NA	NA	False	AATAAA	-33	NA	113679057	113660356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.10	chr2	-	6033	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	1473	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACATGAATCGTACAGT	5961	False	NA	NA	False	AATAAA	-26	NA	113679057	113660363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662641_113663148_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.100	chr2	-	4701	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-249	intron_retention	FALSE	canonical	3	11	junction_8	111.514739788436	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGACAACAAAGGTACTG	5961	False	NA	NA	False	AATAAA	-4	NA	113679057	113662139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.101	chr2	-	4249	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-49	-250	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGACAACAAAGGTACT	5963	False	NA	NA	False	AATAAA	-3	NA	113679055	113662140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662640_113663152_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.103	chr2	-	4091	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	-412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGTCTTGAATTATTC	5962	False	NA	NA	False	CATAAA	-23	NA	113679056	113662302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.104	chr2	-	6372	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-56	-412	intron_retention	TRUE	non_canonical	0	0	junction_1	114.849164465887	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGTCTTGAATTATTC	6320	False	NA	NA	False	CATAAA	-23	NA	113678698	113662302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662724_113663229_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.105	chr2	-	4091	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-412	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGTCTTGAATTATTC	5961	False	NA	NA	False	CATAAA	-23	NA	113679057	113662302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662640_113663150_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.106	chr2	-	4553	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-10	415	-5	-415	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTATGTCTTGAATTA	6007	False	NA	NA	False	CATAAA	-20	NA	113679011	113662305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.107	chr2	-	3938	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-39	-415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.414728518933	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTATGTCTTGAATTA	5973	False	NA	NA	False	CATAAA	-20	NA	113679045	113662305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.108	chr2	-	3668	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	114.384085467623	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGGTGTGTAGATATGT	5961	False	NA	NA	False	AATAAA	-30	NA	113679057	113663250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672430_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.109	chr2	-	3575	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-39	352	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	111.514739788436	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCTGGTGTGTAGATA	5973	False	NA	NA	False	AATAAA	-27	NA	113679045	113663253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.110	chr2	-	3659	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-65	1364	-60	351	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGCTGGTGTGTAGAT	5952	False	NA	NA	False	AATAAA	-26	NA	113679066	113663254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.111	chr2	-	3467	11	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-21	346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.366310650686	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCAAGTGCTGGTGTG	5991	False	NA	NA	False	AATAAA	-21	NA	113679027	113663259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113667210_113667317_113667770_113667889_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.112	chr2	-	5036	9	ISM	ENSMUSG00000041219.15	ENSMUST00000110948.8	4878	11	2964	1424	2600	345	intron_retention	FALSE	canonical	3	16	junction_1	126.733911700855	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTCAAGTGCTGGTGT	8976	False	NA	NA	False	AATAAA	-20	NA	113676042	113663260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591
ES.19757.113	chr2	-	3410	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-50	345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	109.963219861107	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTCAAGTGCTGGTGT	5962	False	NA	NA	False	AATAAA	-20	NA	113679056	113663260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305_113678804_113679036
ES.19757.114	chr2	-	3395	4	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-53	344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.219773704592	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCTCAAGTGCTGGTG	5959	False	NA	NA	False	AATAAA	-19	NA	113679059	113663261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667283_113677421
ES.19757.115	chr2	-	3743	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	342	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	140.185863727014	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATGCTCAAGTGCTGG	5962	False	NA	NA	False	AATAAA	-17	NA	113679056	113663263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113676913_113677017_113678305
ES.19757.116	chr2	-	3445	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-56	1569	-51	146	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGGCCTTTTCTCCAG	5961	False	NA	NA	False	ATTAAA	-16	NA	113679057	113663459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.117	chr2	-	6073	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-52	1572	-47	143	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAATGTGGCCTTTTCTC	5965	False	NA	NA	False	ATTAAA	-13	NA	113679053	113663462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.118	chr2	-	1898	6	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-68	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	165.02048357704	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCGAACAGAGGAAAAGTG	5944	False	NA	NA	False	AATAAA	-14	NA	113679074	113663904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113678305_113678804_113678949
ES.19757.12	chr2	-	5962	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	1469	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	140.43709050279	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTACAACATGAATCGTA	5962	False	NA	NA	False	AATAAA	-22	NA	113679056	113660367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662652_113663161_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.15	chr2	-	5188	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	274	1458	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	146.414728518933	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTCTAATAAGTACAA	6650	False	NA	NA	False	AATAAA	-11	NA	113678368	113660378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662657_113663166_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.16	chr2	-	5417	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	4	-463	4	409	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTAGTCTTAAACTTCA	6021	False	NA	NA	False	AGTAAA	-2	NA	113678997	113661427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.17	chr2	-	5091	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-79	-54	-74	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5938	False	NA	-4	True	ATTAAA	-17	NA	113679080	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.18	chr2	-	4837	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-330	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5682	False	NA	-4	True	ATTAAA	-17	NA	113679336	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.19	chr2	-	7639	11	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	0	intron_retention	FALSE	canonical	3	11	junction_8	116.946312468585	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5961	False	NA	-4	True	ATTAAA	-17	NA	113679057	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599
ES.19757.2	chr2	-	6039	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-54	1478	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATCGTACAGTTTTTG	5958	False	NA	NA	False	AATAAA	-31	NA	113679060	113660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.20	chr2	-	4355	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_11	146.326082138659	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5966	False	NA	-4	True	ATTAAA	-17	NA	113679052	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678949
ES.19757.21	chr2	-	6053	11	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	586	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.29973907349	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	6962	False	NA	-4	True	ATTAAA	-17	NA	113678056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.22	chr2	-	5413	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	0	intron_retention	FALSE	non_canonical	0	0	junction_1	111.46581583236	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.23	chr2	-	5038	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_7	110.547772104893	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5997	False	NA	-4	True	ATTAAA	-17	NA	113679021	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672092_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.24	chr2	-	5013	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-39	0	intron_retention	FALSE	canonical	3	9	junction_11	112.490219960568	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5973	False	NA	-4	True	ATTAAA	-17	NA	113679045	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675628_113678305
ES.19757.26	chr2	-	4454	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.202144420629	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5996	False	NA	-4	True	ATTAAA	-17	NA	113679022	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665191_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.27	chr2	-	7705	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-58	-54	-53	0	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5959	False	NA	-4	True	ATTAAA	-17	NA	113679059	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.28	chr2	-	4385	12	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	146.414728518933	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5996	False	NA	-4	True	ATTAAA	-17	NA	113679022	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662652_113663160_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.29	chr2	-	4865	11	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-51	0	intron_retention	FALSE	canonical	3	11	junction_7	150.231288352327	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5961	False	NA	-4	True	ATTAAA	-17	NA	113679057	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.3	chr2	-	6314	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-16	1476	intron_retention	FALSE	non_canonical	0	0	junction_1	114.851251265954	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAATCGTACAGTTTT	5996	False	NA	NA	False	AATAAA	-29	NA	113679022	113660360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.30	chr2	-	4563	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662714_113663217_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.31	chr2	-	7576	10	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-49	0	intron_retention	FALSE	canonical	0	0	junction_7	160.224842018958	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5963	False	NA	-4	True	ATTAAA	-17	NA	113679055	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672430_113673030_113673285_113673591_113673689_113675599
ES.19757.32	chr2	-	4418	12	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.414728518933	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.34	chr2	-	4435	14	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.470771503442	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5938	False	NA	-4	True	ATTAAA	-17	NA	113679080	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305_113678804_113678949
ES.19757.35	chr2	-	4519	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5999	False	NA	-4	True	ATTAAA	-17	NA	113679019	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662658_113663168_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.36	chr2	-	4557	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5963	False	NA	-4	True	ATTAAA	-17	NA	113679055	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662652_113663160_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.38	chr2	-	4553	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5961	False	NA	-4	True	ATTAAA	-17	NA	113679057	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662638_113663152_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.40	chr2	-	4481	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.604177394438	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5995	False	NA	-4	True	ATTAAA	-17	NA	113679023	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675628_113678305
ES.19757.41	chr2	-	4554	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5966	False	NA	-4	True	ATTAAA	-17	NA	113679052	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662664_113663172_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.42	chr2	-	4518	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	141.604177394438	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662685_113663190_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675628_113678305
ES.19757.43	chr2	-	4851	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	149.255950779107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5996	False	NA	-4	True	ATTAAA	-17	NA	113679022	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675684_113678305
ES.19757.44	chr2	-	3861	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.128072135271	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113679001
ES.19757.47	chr2	-	4506	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.184515767437	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	6007	False	NA	-4	True	ATTAAA	-17	NA	113679011	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678311
ES.19757.48	chr2	-	9070	11	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_1	119.574913757025	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5995	False	NA	-4	True	ATTAAA	-17	NA	113679023	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591
ES.19757.49	chr2	-	4981	11	NIC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-35	0	intron_retention	FALSE	canonical	1	3	junction_10	118.731840716802	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5977	False	NA	-4	True	ATTAAA	-17	NA	113679041	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113678305
ES.19757.51	chr2	-	4347	11	NNC	ENSMUSG00000041219.15	novel	4878	11	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.317581858885	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113678305
ES.19757.53	chr2	-	4519	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	141.438713661509	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5995	False	NA	-4	True	ATTAAA	-17	NA	113679023	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662689_113663194_113664808_113665122_113665262_113667210_113667317_113667770_113667889_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.54	chr2	-	4499	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.503216337971	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	5962	False	NA	-4	True	ATTAAA	-17	NA	113679056	113661836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673227_113673591_113673689_113675599_113675671_113678305
ES.19757.55	chr2	-	7149	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-6	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	114.849164465887	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCTTGTCTGCGTGTTGT	6006	False	NA	-5	True	ATTAAA	-16	NA	113679012	113661837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662645_113663152_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.57	chr2	-	7883	10	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	664	0	intron_retention	FALSE	non_canonical	0	0	junction_1	161.477743755587	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	7040	False	NA	-7	True	ATTAAA	-14	NA	113677978	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591
ES.19757.58	chr2	-	4947	11	FSM	ENSMUSG00000041219.15	ENSMUST00000110948.8	4878	11	-72	3	-72	0	multi-exon	FALSE	canonical	3	16	junction_1	114.655832821536	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5940	False	NA	-7	True	ATTAAA	-14	NA	113679078	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.59	chr2	-	4708	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5996	False	NA	-7	True	ATTAAA	-14	NA	113679022	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662873_113663194_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.6	chr2	-	6024	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-41	1475	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGAATCGTACAGTTT	5971	False	NA	NA	False	AATAAA	-28	NA	113679047	113660361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662664_113663172_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.61	chr2	-	5045	12	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_8	114.384085467623	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5995	False	NA	-7	True	ATTAAA	-14	NA	113679023	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672430_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.62	chr2	-	5185	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-68	0	intron_retention	FALSE	canonical	2	5	junction_12	140.185863727014	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5944	False	NA	-7	True	ATTAAA	-14	NA	113679074	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113676913_113677017_113678305
ES.19757.63	chr2	-	4246	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	140.565203335992	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5980	False	NA	-7	True	ATTAAA	-14	NA	113679038	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662730_113663235_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678599
ES.19757.65	chr2	-	4216	13	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-72	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	6304	False	NA	-7	True	ATTAAA	-14	NA	113678714	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662692_113663197_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.66	chr2	-	13055	6	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	43	0	intron_retention	FALSE	non_canonical	0	0	junction_5	146.384971906272	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	6419	False	NA	-7	True	ATTAAA	-14	NA	113678599	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113671119_113671941_113672086_113672249
ES.19757.67	chr2	-	7322	11	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_1	115.876183920597	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	5995	False	NA	-7	True	ATTAAA	-14	NA	113679023	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.68	chr2	-	5620	12	NNC	ENSMUSG00000041219.15	novel	4458	14	NA	NA	1155	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.849164465887	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	7531	False	NA	-7	True	ATTAAA	-14	NA	113677487	113661839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.7	chr2	-	6824	11	NNC	ENSMUSG00000041219.15	novel	3199	11	NA	NA	-60	1475	intron_retention	FALSE	canonical	3	9	junction_10	117.979871164534	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGAATCGTACAGTTT	5952	False	NA	NA	False	AATAAA	-28	NA	113679066	113660361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675628_113678305
ES.19757.70	chr2	-	4987	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	11	junction_8	111.514739788436	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	5974	False	NA	-8	True	ATTAAA	-13	NA	113679044	113661840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.73	chr2	-	4227	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-85	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	6291	False	NA	-8	True	ATTAAA	-13	NA	113678727	113661840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662708_113663214_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.74	chr2	-	4560	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-55	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	5957	False	NA	-8	True	ATTAAA	-13	NA	113679061	113661840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662679_113663186_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.75	chr2	-	4200	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-17	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	147.511534778003	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	5995	False	NA	-8	True	ATTAAA	-13	NA	113679023	113661840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662647_113663158_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673591_113673689_113675599_113675671_113678305
ES.19757.76	chr2	-	4897	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-79	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	114.851251265954	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGTCTTGTCTGCGTGT	5933	False	NA	-8	True	ATTAAA	-13	NA	113679085	113661840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.79	chr2	-	5366	11	FSM	ENSMUSG00000041219.15	ENSMUST00000110947.2	3199	11	-403	-1764	-39	-2	multi-exon	FALSE	canonical	3	279	junction_1	48.9069524709933	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACGTCTTGTCTGCGTG	5973	False	NA	-9	True	ATTAAA	-12	NA	113679045	113661841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.80	chr2	-	4491	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.43709050279	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACGTCTTGTCTGCGTG	5959	False	NA	-9	True	ATTAAA	-12	NA	113679059	113661841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.82	chr2	-	3845	9	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	132.84295239116	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACGTCTTGTCTGCGTG	5961	False	NA	-9	True	ATTAAA	-12	NA	113679057	113661841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672327_113679012
ES.19757.85	chr2	-	4873	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-60	-3	intron_retention	FALSE	canonical	0	0	junction_12	109.963219861107	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAACGTCTTGTCTGCGT	5952	False	NA	-10	True	ATTAAA	-11	NA	113679066	113661842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305_113678804_113679001
ES.19757.87	chr2	-	8175	10	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	118.602979164381	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAACGTCTTGTCTGCG	5961	False	NA	-11	True	ATTAAA	-10	NA	113679057	113661843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.88	chr2	-	4866	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	114.851251265954	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAACGTCTTGTCTGC	5961	False	NA	-12	True	ATTAAA	-9	NA	113679057	113661844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662664_113663172_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.89	chr2	-	4543	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-51	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.184515767437	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAAACGTCTTGTCTG	5961	False	NA	-13	True	ATTAAA	-8	NA	113679057	113661845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675665_113678305
ES.19757.9	chr2	-	6644	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	1474	intron_retention	FALSE	canonical	2	5	junction_12	140.185863727014	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACATGAATCGTACAGTT	5962	False	NA	NA	False	AATAAA	-27	NA	113679056	113660362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113676913_113677017_113678305
ES.19757.90	chr2	-	4170	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-17	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.43709050279	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5995	False	NA	NA	False	AATAAA	-17	NA	113679023	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672352_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.91	chr2	-	4233	13	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-16	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.963219861107	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5996	False	NA	NA	False	AATAAA	-17	NA	113679022	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.92	chr2	-	7163	9	NIC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	2813	-236	intron_retention	FALSE	canonical	3	279	junction_2	49.7393204617835	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	9189	False	NA	NA	False	AATAAA	-17	NA	113675829	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19757.93	chr2	-	4128	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.414728518933	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5962	False	NA	NA	False	AATAAA	-17	NA	113679056	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.94	chr2	-	4582	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-50	-236	intron_retention	FALSE	non_canonical	0	0	junction_1	114.851251265954	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5962	False	NA	NA	False	AATAAA	-17	NA	113679056	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113662635_113663144_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.95	chr2	-	5056	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-334	236	-329	-236	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5683	False	NA	NA	False	AATAAA	-17	NA	113679335	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.96	chr2	-	4794	12	NNC	ENSMUSG00000041219.15	novel	4958	12	NA	NA	-53	-236	intron_retention	FALSE	canonical	0	0	junction_8	114.384085467623	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	5959	False	NA	NA	False	AATAAA	-17	NA	113679059	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672430_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ES.19757.97	chr2	-	6566	8	NIC	ENSMUSG00000041219.15	novel	3199	11	NA	NA	3273	-236	intron_retention	FALSE	canonical	3	279	junction_1	46.9402572969305	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACTGCATACTTTATAAT	9649	False	NA	NA	False	AATAAA	-17	NA	113675369	113662126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113673285_113673591
ES.19757.98	chr2	-	7406	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-55	242	-50	-242	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTACTGCATACTT	5962	False	NA	NA	False	AATAAA	-11	NA	113679056	113662132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ES.19758.1	chr2	-	1252	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	62	2	62	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTTAAAAAAAAAAAAAAAA	7222	False	NA	NA	False	AGTAAA	-17	NA	113751424	113750172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113750200_113751400
ES.19758.2	chr2	-	903	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	5	408	5	-408	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTTTTTAAACTGT	7165	False	NA	NA	False	AAGAAA	-24	NA	113751481	113750578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113750600_113751500
ES.19759.1	chr2	-	4911	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	-15	-8	-15	8	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTGCCCTTTTTTCTTT	7794	False	NA	5	True	ATTAAA	-27	NA	114005835	113931642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.12	chr2	-	5863	34	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	207	junction_20	29.3782213520009	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7843	False	NA	-5	True	ATTAAA	-17	NA	114005786	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.13	chr2	-	4963	36	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	67.1375924987679	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7841	False	NA	-5	True	ATTAAA	-17	NA	114005788	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996108_113996218_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.14	chr2	-	5953	27	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-15147	-2	intron_retention	FALSE	canonical	0	0	junction_6	58.9909229804284	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	NA	False	NA	-5	True	ATTAAA	-17	NA	113986771	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943026_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727
ES.19759.16	chr2	-	4749	34	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	53.1588053464201	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7843	False	NA	-5	True	ATTAAA	-17	NA	114005786	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.17	chr2	-	4725	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.2237881618509	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7838	False	NA	-5	True	ATTAAA	-17	NA	114005791	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949248_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.2	chr2	-	4912	36	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	79.1677939053295	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCATACTTGCCCTT	7831	False	NA	-3	True	ATTAAA	-19	NA	114005798	113931650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985160_113985203_113985445_113985523_113986727_113986829_113988016_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.23	chr2	-	5102	36	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.8690831828453	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAAGGCATACTTGCC	7844	False	NA	-6	True	ATTAAA	-16	NA	114005785	113931653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938142_113938395_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.24	chr2	-	4903	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.2237881618509	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTAAGGCATACTTG	7843	False	NA	-8	True	ATTAAA	-14	NA	114005786	113931655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949434_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.26	chr2	-	5606	33	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-6	-5	intron_retention	FALSE	canonical	0	0	junction_18	69.3775900417419	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTAAGGCATACTTG	7865	False	NA	-8	True	ATTAAA	-14	NA	114005764	113931655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113971349_113971492_113973464_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.29	chr2	-	4722	18	ISM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	38845	5	4649	-5	3prime_fragment	FALSE	canonical	3	216	junction_7	29.75575312928	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTAAGGCATACTTG	NA	False	NA	-8	True	ATTAAA	-14	NA	113966975	113931655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132
ES.19759.30	chr2	-	4929	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	52.977250781312	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTAAGGCATACTTG	7841	False	NA	-8	True	ATTAAA	-14	NA	114005788	113931655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977552_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.34	chr2	-	4666	34	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	-29	-10	combination_of_known_splicesites	FALSE	canonical	2	4	junction_18	53.4516593737478	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATCAAACATGTAAGGCAT	7842	False	NA	-13	True	ATTAAA	-9	NA	114005787	113931660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.35	chr2	-	4652	29	ISM	ENSMUSG00000040383.17	ENSMUST00000102543.5	4352	34	16388	-862	16357	862	3prime_fragment	FALSE	canonical	2	4	junction_1	54.5804382054036	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCAGTGTGTTGTCTTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	113989370	113934780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_113935843_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350
ES.19759.36	chr2	-	4417	34	FSM	ENSMUSG00000040383.17	ENSMUST00000102543.5	4352	34	-58	-7	3	7	multi-exon	FALSE	canonical	2	4	junction_1	51.8196880872694	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGATGTGTTTGTTC	7813	False	NA	NA	False	AGTAAA	-32	NA	114005816	113935635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113935843_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.37	chr2	-	339	1	Genic_Genomic	ENSMUSG00000040383.17	novel	NA	NA	NA	NA	6724	1	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-26	NA	113942944	113942605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_113942600_113942900
ES.19759.38	chr2	-	3875	1	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	3884	-17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	113967740	113963865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113963900_113967700
ES.19759.39	chr2	-	1084	9	FSM	ENSMUSG00000040383.17	ENSMUST00000131785.8	3112	9	15	2013	15	-2013	multi-exon	FALSE	canonical	3	222	junction_1	25.6307920283397	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTAGTAAATGTTTG	7825	False	NA	NA	False	ATTAAA	-26	NA	114005804	113985236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.4	chr2	-	4690	34	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	53.9562112019805	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCATACTTGCCCTT	7839	False	NA	-3	True	ATTAAA	-19	NA	114005790	113931650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.5	chr2	-	4816	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	53.1943049869531	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCATACTTGCCCTT	7823	False	NA	-3	True	ATTAAA	-19	NA	114005806	113931650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943077_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.6	chr2	-	9809	16	NIC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	2405	-1	intron_retention	FALSE	canonical	3	216	junction_5	30.7221237691812	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGGCATACTTGCCCT	NA	False	NA	-4	True	ATTAAA	-18	NA	113969219	113931651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132
ES.19759.7	chr2	-	4872	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	53.2238287946019	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7816	False	NA	-5	True	ATTAAA	-17	NA	114005813	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989485_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.19759.9	chr2	-	4812	35	NNC	ENSMUSG00000040383.17	novel	4888	35	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	68.5437311472375	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAGGCATACTTGCCC	7875	False	NA	-5	True	ATTAAA	-17	NA	114005754	113931652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965303_113967358_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977472_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ES.1976.1	chr1	+	3708	1	Antisense	novelGene_ENSMUSG00000102885.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACCTGTGTCGTTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	177415188	177418896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_177415200_177418900
ES.19760.1	chr2	-	4406	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	70	-176	41	176	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCATTTTTTAAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114031880	114023765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114028109_114031817
ES.19760.2	chr2	-	4517	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	28	176	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCATTTTTTAAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114031893	114023765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114028109_114031435_114031534_114031817
ES.19760.3	chr2	-	4280	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	21	-1	-8	1	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGATTTTGTTTGGTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	114031929	114023940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114028109_114031817
ES.19760.4	chr2	-	4416	2	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGATTTTGTTTGGTGA	NA	False	NA	-4	True	AATAAA	-25	NA	114031922	114023941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114028109_114031673
ES.19760.5	chr2	-	4363	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGAGATTTTGTTTGGT	NA	False	NA	-6	True	AATAAA	-23	NA	114031917	114023943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114028109_114031435_114031534_114031817
ES.19761.1	chr2	+	1206	9	Intergenic	novelGene_16396	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATATGGCTCAGAATTT	NA	False	NA	NA	False	NA	NA	NA	114348527	114485544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_114348771_114350189_114350280_114353523_114353620_114366005_114366067_114398399_114398520_114399957_114400031_114475200_114475396_114478221_114478319_114485313
ES.19761.2	chr2	+	1002	9	Intergenic	novelGene_16395	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGTGCGTGCGTACGT	NA	False	NA	NA	False	NA	NA	NA	114348527	114485340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_114348771_114350189_114350280_114353523_114353620_114366005_114366067_114398399_114398520_114399957_114400031_114475200_114475396_114478221_114478319_114485313
ES.19761.3	chr2	+	3744	1	Intergenic	novelGene_16398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGCATACACTAGC	NA	False	NA	NA	False	NA	NA	NA	114390601	114394345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_114390600_114394300
ES.19762.1	chr2	-	3021	7	NNC	ENSMUSG00000057147.14	novel	3010	3	NA	NA	5	28284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.0878555082188	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAACTGAAATACTTGT	NA	False	NA	NA	False	AAGAAA	-7	NA	114485440	114318612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114320961_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.10	chr2	-	4242	8	NIC	ENSMUSG00000057147.14	novel	2734	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	190	junction_2	19.5291514178686	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTTCAGTGAACTCT	NA	False	NA	NA	False	AATATA	-21	NA	114485433	114348624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_114348774_114350192_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.11	chr2	-	1052	10	NNC	ENSMUSG00000057147.14	novel	2734	9	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.4756933241602	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAATTTCAGTGAACT	NA	False	NA	NA	False	AATATA	-19	NA	114485421	114348626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114398871_114398940_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.12	chr2	-	1902	1	Intergenic	novelGene_16397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTGTTTCTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	114378335	114376433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_114376400_114378300
ES.19762.13	chr2	-	1491	1	NIC	ENSMUSG00000057147.14	novel	2632	8	NA	NA	15	-11307	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCCTGTTGAATGGAAG	NA	False	NA	NA	False	NA	NA	NA	114485353	114483862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_114483900_114485400
ES.19762.2	chr2	-	4434	4	ISM	ENSMUSG00000057147.14	ENSMUST00000138106.8	556	5	10340	-4076	10340	2347	3prime_fragment	FALSE	canonical	3	190	junction_3	22.8958996814325	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTCTGTTGACGTTACT	NA	False	NA	NA	False	NA	NA	NA	114366032	114344549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005
ES.19762.3	chr2	-	2674	9	NNC	ENSMUSG00000057147.14	novel	2734	9	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.2972330651028	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGTGTGAATGTCAG	NA	False	NA	-4	True	NA	NA	NA	114485389	114346898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366062_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.4	chr2	-	2774	9	FSM	ENSMUSG00000057147.14	ENSMUST00000055144.8	2476	9	-72	-226	5	-2	multi-exon	FALSE	canonical	3	3	junction_1	69.7096657573396	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGTGTGAATGTCAG	NA	False	NA	-4	True	NA	NA	NA	114485440	114346898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114348774_114350149_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.5	chr2	-	2733	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	3	-2	3	-2	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGTGTGAATGTCAG	NA	False	NA	-4	True	NA	NA	NA	114485442	114346898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.7	chr2	-	2049	6	ISM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	85445	231	-23628	-7	3prime_fragment	FALSE	canonical	3	190	junction_3	21.0009523593574	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114400000	114347131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957
ES.19762.8	chr2	-	1920	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	60	754	1	-530	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTCACTTCAAAACTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	114485385	114347654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19762.9	chr2	-	1014	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	-3	1723	-3	2	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTCAGTGAACTCTT	NA	False	NA	NA	False	AATATA	-22	NA	114485448	114348623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ES.19763.1	chr2	+	2972	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-319	82	-302	-82	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTGTCAGAGATTTG	NA	False	NA	-75	True	AGTAAA	-36	NA	115411894	115609167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.10	chr2	+	1734	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-38	1039	-21	-1039	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCTTCACAAGGCTGA	NA	False	NA	NA	False	CATAAA	-15	NA	115412175	115608210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.11	chr2	+	2662	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-20	-174	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	116.799821691248	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTACCAGTTTGGTTTG	NA	False	NA	13	True	ATTAAA	-22	NA	115412176	115609075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
ES.19763.12	chr2	+	3260	11	NNC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	-12	-181	intron_retention	FALSE	canonical	3	15	junction_1	122.241400515537	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCTAAGTTACCAGTT	NA	False	NA	6	True	ATTAAA	-15	NA	115412184	115609068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115434047_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115517651_115607382
ES.19763.13	chr2	+	2715	13	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-12	-180	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	140.525477128605	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412184	115609069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
ES.19763.14	chr2	+	2796	11	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-11	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	99.6927780734392	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGGAGCCCTGACATAA	NA	False	NA	19	True	AATAAA	-29	NA	115412185	115609261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500041_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.16	chr2	+	2468	9	NIC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-9	-182	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	107.214081980867	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCCTAAGTTACCAGT	NA	False	NA	5	True	ATTAAA	-14	NA	115412187	115609067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_115412467_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.17	chr2	+	2837	13	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	3	-179	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	136.292246253736	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412216	115609070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115429587_115429805_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.18	chr2	+	2839	14	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	3	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	150.761224277206	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412216	115609069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115495700_115495774_115496946_115497064_115498796_115498894_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.19	chr2	+	4054	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	3	-1322	3	1322	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGATGTGTGTTTGTTCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	115412216	115610571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.2	chr2	+	1293	10	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-57	57291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	152.134281166911	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTATCTTTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	115412139	115528415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115525822_115525915_115528045
ES.19763.20	chr2	+	2110	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	6	-686	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGCTTTCATTTCTTTAG	NA	False	NA	26	True	TATAAA	-16	NA	115412219	115608563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.21	chr2	+	6786	10	NIC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	18	3456	intron_retention	FALSE	canonical	3	289	junction_7	18.6309181499762	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTTTGTTTAATG	NA	False	NA	NA	False	ACTAAA	-18	NA	115412231	115612705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115517651_115607382
ES.19763.22	chr2	+	2525	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	26	184	26	-184	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGCCCTAAGTTACCA	NA	False	NA	3	True	ATTAAA	-12	NA	115412239	115609065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.23	chr2	+	2066	11	NNC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	26	-604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	142.774087284773	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTTTGGGAAATTAAAA	NA	False	NA	108	True	AATAAA	-14	NA	115412239	115608645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115607382
ES.19763.24	chr2	+	2020	11	FSM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	64	686	-21	-686	multi-exon	FALSE	canonical	3	13	junction_9	96.2369991219593	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGCTTTCATTTCTTTAG	NA	False	NA	26	True	TATAAA	-16	NA	115412260	115608563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517526_115517651_115607382
ES.19763.25	chr2	+	2389	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	159	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.590313365662	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412440	115609069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115423084_115423146_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.26	chr2	+	1889	12	NNC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	21777	-692	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	126.400387069185	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATTCGCTTTCATTT	NA	False	NA	20	True	TATAAA	-10	NA	115434058	115608557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115434112_115434511_115434558_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.27	chr2	+	2024	4	ISM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	92388	688	92320	-688	3prime_fragment	FALSE	canonical	3	283	junction_2	24.2807651352991	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCGCTTTCATTTCTTT	NA	False	NA	24	True	TATAAA	-14	NA	115504601	115608561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.28	chr2	+	1878	1	Intergenic	novelGene_16401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	115578482	115580360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_115578500_115580400
ES.19763.29	chr2	+	6950	1	Intergenic	novelGene_16402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGCTAGACCATTCTA	3567	False	NA	NA	False	NA	NA	NA	115585375	115592325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_115585400_115592300
ES.19763.3	chr2	+	2696	12	NNC	ENSMUSG00000040282.14	novel	2735	11	NA	NA	-56	-179	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGTTACCAGTTTG	NA	False	NA	8	True	ATTAAA	-17	NA	115412140	115609070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.4	chr2	+	2183	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-52	604	-35	-604	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTTTGGGAAATTAAAA	NA	False	NA	108	True	AATAAA	-14	NA	115412161	115608645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.6	chr2	+	2295	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	-39	479	-22	-479	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCATACGTTGGTTGG	NA	False	NA	NA	False	TATAAA	-44	NA	115412174	115608770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ES.19763.8	chr2	+	2619	11	FSM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	-22	173	-22	-173	multi-exon	FALSE	canonical	3	13	junction_9	96.2369991219593	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACCAGTTTGGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	115412174	115609076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517526_115517651_115607382
ES.19763.9	chr2	+	2487	10	NIC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	-21	-180	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	105.162777999363	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCTAAGTTACCAGTTT	NA	False	NA	7	True	ATTAAA	-16	NA	115412175	115609069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115607382
ES.19764.1	chr2	-	171	1	Intergenic	novelGene_16399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	115439227	115439056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_115439100_115439200
ES.19765.1	chr2	-	6916	1	Antisense	novelGene_ENSMUSG00000040282.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-15	NA	115522294	115515378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_115515400_115522300
ES.19766.1	chr2	-	2116	1	Intergenic	novelGene_16400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATTGGGTCAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115532993	115530877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_115530900_115533000
ES.19767.1	chr2	+	4116	1	Antisense	novelGene_ENSMUSG00000027210.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAAAATAACAGAAATC	NA	False	NA	NA	False	AGTAAA	-26	NA	115699034	115703150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_115699000_115703200
ES.19768.1	chr2	+	3420	1	Intergenic	novelGene_16404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGGAAGGGAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	115721636	115725056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_115721600_115725100
ES.19769.1	chr2	-	4353	1	Intergenic	novelGene_16403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115691821	115687468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_115687500_115691800
ES.19769.12	chr2	-	2908	13	NNC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	-68	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.3196675388376	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115895061	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572_115894749_115894888
ES.19769.14	chr2	-	3005	13	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	3697	13	NA	NA	262	-5	multi-exon	FALSE	canonical	0	0	junction_2	21.6273682068706	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115897663	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115896711_115897100_115897605
ES.19769.15	chr2	-	3519	12	FSM	ENSMUSG00000027210.21	ENSMUST00000102538.11	2810	12	-714	5	78	-5	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115896242	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.16	chr2	-	3775	13	NIC	ENSMUSG00000027210.21	novel	3718	13	NA	NA	32	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.8268120031814	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115896288	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115872419_115872609_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.17	chr2	-	3042	14	NNC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	103	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	19.7283324331205	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115895099	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572_115894750_115894888
ES.19769.18	chr2	-	2696	12	NNC	ENSMUSG00000027210.21	novel	3229	13	NA	NA	326	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.972236665263	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115894623	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892139_115893668_115893902_115894572
ES.19769.19	chr2	-	5093	13	NNC	ENSMUSG00000027210.21	novel	3697	13	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.9643779990484	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	115896309	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115887699_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.2	chr2	-	5435	12	FSM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	-782	-1822	10	1822	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTTATTTATATGGA	NA	False	NA	NA	False	AATAAA	-38	NA	115896310	115691722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.20	chr2	-	2224	10	NNC	ENSMUSG00000027210.21	novel	2810	12	NA	NA	1243	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6066744213974	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTAGGCTTTGGTGTTT	2954	False	NA	-3	True	AATAAA	-18	NA	115891598	115693551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891556
ES.19769.21	chr2	-	3069	14	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	3697	13	NA	NA	288	-10	multi-exon	FALSE	canonical	0	0	junction_3	20.9298631528645	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTAGGCTTTGGTG	NA	False	NA	-6	True	AATAAA	-15	NA	115897637	115693554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115896711_115897100_115897605
ES.19769.22	chr2	-	3049	14	NNC	ENSMUSG00000027210.21	novel	3229	13	NA	NA	-98	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.7283324331205	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTAGGCTTTGGTG	NA	False	NA	-6	True	AATAAA	-15	NA	115895091	115693554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697290_115697386_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572_115894749_115894888
ES.19769.23	chr2	-	3227	14	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	3697	13	NA	NA	299	-11	multi-exon	FALSE	canonical	0	0	junction_2	23.2027339747997	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTAGGCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	115897626	115693555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115872419_115872609_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115896711_115897100_115897529
ES.19769.24	chr2	-	3614	12	FSM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	-794	11	-2	-11	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTAGGCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	115896322	115693555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.29	chr2	-	2160	9	NNC	ENSMUSG00000027210.21	novel	2810	12	NA	NA	-1343	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.840479417035	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGTTAGGCTTTG	3886	False	NA	-9	True	AATAAA	-12	NA	115890666	115693557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115890631
ES.19769.3	chr2	-	3500	14	NNC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	92	1288	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.7283324331205	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATATTGGCAGCTT	NA	False	NA	NA	False	TATAAA	-27	NA	115894857	115692256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115693944_115694675_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
ES.19769.30	chr2	-	2935	13	NNC	ENSMUSG00000027210.21	novel	3229	13	NA	NA	-81	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.3196675388376	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGTTAGGCTTTG	NA	False	NA	-9	True	AATAAA	-12	NA	115895074	115693557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697861_115699224_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572_115894749_115894888
ES.19769.33	chr2	-	1687	11	NNC	ENSMUSG00000027210.21	novel	3718	13	NA	NA	1227	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.7092146334224	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATGACTGTCTTGGT	2938	False	NA	NA	False	AATATA	-33	NA	115891614	115694331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697290_115697386_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891445
ES.19769.34	chr2	-	3006	9	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	804	7	NA	NA	-781	19903	multi-exon	TRUE	canonical	0	0	junction_1	20.4939015319192	106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTCCAACTTCATGT	NA	False	NA	NA	False	NA	NA	NA	115897101	115806633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115806933_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ES.19769.35	chr2	-	436	2	FSM	ENSMUSG00000086328.2	ENSMUST00000140185.2	721	2	280	5	280	-5	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGATCTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	115897645	115896703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_115897100_115897605
ES.19769.4	chr2	-	3477	14	NNC	ENSMUSG00000027210.21	novel	2844	13	NA	NA	-84	453	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	19.7283324331205	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAGTAAACACTTTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	115895077	115693091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572_115894749_115894888
ES.19769.5	chr2	-	2949	11	ISM	ENSMUSG00000027210.21	ENSMUST00000110906.9	3229	13	3077	-531	716	450	3prime_fragment	FALSE	canonical	0	0	junction_3	18.0930926046378	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGATAAGTAAACACTTT	2427	False	NA	NA	False	ATTAAA	-17	NA	115892125	115693094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_115694995_115697290_115697386_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931
ES.19769.6	chr2	-	3236	12	NNC	ENSMUSG00000027210.21	novel	3718	13	NA	NA	-18	355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.1073603550284	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAAGTTATGTGTGTGC	NA	False	NA	NA	False	AATAAA	-28	NA	115895546	115693189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893636_115893902_115895282
ES.19769.7	chr2	-	4529	14	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	3697	13	NA	NA	268	1	multi-exon	FALSE	canonical	0	0	junction_3	19.5886695906425	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTGTTTTTTAATGG	NA	False	NA	5	True	AATAAA	-26	NA	115897657	115693543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282_115897100_115897605
ES.19769.8	chr2	-	3015	13	Fusion	ENSMUSG00000027210.21_ENSMUSG00000086328.2	novel	3718	13	NA	NA	274	-4	multi-exon	FALSE	canonical	0	0	junction_2	21.6273682068706	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGGCTTTGGTGTTTTTT	NA	False	NA	0	True	AATAAA	-21	NA	115897651	115693548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115896711_115897100_115897605
ES.19769.9	chr2	-	2229	10	NNC	ENSMUSG00000027210.21	novel	2831	12	NA	NA	981	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6066744213974	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGGCTTTGGTGTTTTT	2692	False	NA	-1	True	AATAAA	-20	NA	115891860	115693549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891836
ES.1977.1	chr1	-	2932	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTCGGTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	177575056	177572124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_177572100_177575100
ES.19770.1	chr2	-	163	1	Intergenic	novelGene_16405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATTTTTAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	116007445	116007282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_116007300_116007400
ES.19771.1	chr2	+	3805	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-641	2852	-641	-2852	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCCAGGTTTTCAGTGT	NA	False	NA	NA	False	GATAAA	-30	NA	116951213	117009908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.10	chr2	+	2705	7	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-318	-3481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.5723809439155	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGGTTCCTTTAGTTGT	NA	False	NA	NA	False	AGTAAA	-10	NA	116951536	117009279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_116952195_116983472_116983648_116994083_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.11	chr2	+	2021	5	FSM	ENSMUSG00000027351.15	ENSMUST00000110901.2	1440	5	-581	0	-317	0	multi-exon	FALSE	canonical	3	100	junction_4	10.917302780449	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTTGGAAAAGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	116951537	117003335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408
ES.19771.12	chr2	+	4236	6	NIC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-317	-1995	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.3404790652837	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTTTTAACCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	116951537	117010765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117007782
ES.19771.13	chr2	+	4169	8	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-316	-2002	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.0681817149727	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAATTGTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	116951538	117010758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_116952195_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782_117008835_117008952
ES.19771.14	chr2	+	4910	5	NIC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-314	-1201	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.0529051127454	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGACAACTCCAGAGAG	NA	False	NA	NA	False	AATAAA	-19	NA	116951540	117011559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_116952238_116983472_116983648_117002408_117002568_117005824_117005927_117007782
ES.19771.15	chr2	+	6221	6	NIC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-307	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.3404790652837	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCTCACTTCTTCA	NA	False	NA	16	True	ATTAAA	-21	NA	116951547	117012760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117007782
ES.19771.17	chr2	+	4078	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-278	2216	-278	-2216	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCATTTTTTTTTTCTG	NA	False	NA	NA	False	AATAAA	-30	NA	116951576	117010544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.18	chr2	+	3255	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-262	3023	-262	-3023	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCTTGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	116951592	117009737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.19	chr2	+	5096	7	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-249	-1187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.5156833807635	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTGTGTATGTTTCTG	NA	False	NA	NA	False	AATAAA	-33	NA	116951605	117011573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005806_117005927_117007782
ES.19771.2	chr2	+	6643	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-627	0	-627	0	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCTCACTTCTTCA	NA	False	NA	16	True	ATTAAA	-21	NA	116951227	117012760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.20	chr2	+	2046	1	Intergenic	novelGene_16406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAACTAACAACA	2649	False	NA	NA	False	AATACA	-29	NA	116975488	116977534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_116975500_116977500
ES.19771.21	chr2	+	6285	6	ISM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	31775	-809	31511	809	3prime_fragment	FALSE	canonical	3	100	junction_3	10.870142593361	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGGAGTGAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	116983629	117013569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.3	chr2	+	4648	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-623	1991	-623	-1991	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAACCTTGGATT	NA	False	NA	NA	False	ATTAAA	-21	NA	116951231	117010769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.4	chr2	+	5741	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-449	724	-449	-724	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGCTCTTCCTCTTG	NA	False	NA	NA	False	GATAAA	-18	NA	116951405	117012036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.5	chr2	+	3722	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-442	2736	-442	-2736	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTGTCTGTAAAATAC	NA	False	NA	NA	False	ATTAAA	-25	NA	116951412	117010024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.6	chr2	+	2893	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-350	3473	-350	-3473	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTAGTTGTTTTGTTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	116951504	117009287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.7	chr2	+	4315	7	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-340	-1998	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.6132478096764	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTTTTTTTAACC	NA	False	NA	NA	False	ATTAAA	-14	NA	116951514	117010762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_116952195_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.8	chr2	+	5146	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-321	1191	-321	-1191	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGAGTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-29	NA	116951533	117011569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ES.19771.9	chr2	+	5156	8	NNC	ENSMUSG00000027351.15	novel	6016	7	NA	NA	-321	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.3606193192911	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGGCTTTTCTCACTT	NA	False	NA	11	True	ATTAAA	-16	NA	116951533	117012755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782_117009312_117010487
ES.19772.1	chr2	+	1627	2	Genic_Genomic	ENSMUSG00000076376.3	novel	100	1	NA	NA	81	2563	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGGAGCAATCGTGTCC	NA	False	NA	NA	False	NA	NA	NA	117015688	117018270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_117016782_117017736
ES.19772.2	chr2	+	2587	1	FSM	ENSMUSG00000076376.3	ENSMUST00000102421.3	100	1	83	-2570	83	2570	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAATCGTGTCCTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	117015690	117018277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_117015700_117018300
ES.19773.1	chr2	+	561	1	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	21240	1	12197	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTGTCATGGCTT	NA	False	NA	43	True	ATTAAA	-21	NA	117101459	117102020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_117101500_117102000
ES.19774.3	chr2	-	5267	17	NNC	ENSMUSG00000027347.19	novel	5229	17	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_16	12.0141518115096	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAAGTCGTGTGCTTCT	NA	False	NA	-4	True	CATAAA	-19	NA	117173517	117110470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132501_117136254_117136365_117168756_117168942_117173155
ES.19774.4	chr2	-	4855	16	NNC	ENSMUSG00000027347.19	novel	5104	17	NA	NA	7197	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.0731276543399	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAAAGTCGTGTGCTT	NA	False	NA	-6	True	CATAAA	-17	NA	117165993	117110472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132501_117136254_117136365_117165856
ES.19774.9	chr2	-	4888	16	NNC	ENSMUSG00000027347.19	novel	5104	17	NA	NA	4055	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.0731276543399	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTCAAAGTCGTGTG	NA	False	NA	-9	True	CATAAA	-14	NA	117169135	117110475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132501_117136254_117136365_117168962
ES.19775.1	chr2	+	269	1	Intergenic	novelGene_16407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	118002796	118003065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118002800_118003100
ES.19776.1	chr2	-	6345	1	Intergenic	novelGene_16408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2752	False	NA	NA	False	NA	NA	NA	118009627	118003282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118003300_118009600
ES.19777.1	chr2	+	1230	1	Intergenic	novelGene_16409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118047884	118049114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118047900_118049100
ES.19778.1	chr2	-	1688	11	NNC	ENSMUSG00000027344.15	novel	1673	11	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.31058907144937	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTTATTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	118087463	118035366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118035656_118052806_118052942_118063384_118063541_118067394_118067506_118070872_118071031_118072123_118072214_118078775_118078873_118080286_118080442_118082119_118082301_118083766_118083900_118087280
ES.19778.2	chr2	-	1569	11	FSM	ENSMUSG00000027344.15	ENSMUST00000028821.10	1673	11	-29	133	-29	-133	multi-exon	FALSE	canonical	0	0	junction_4	2.92574776766556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATCCTCCTGTG	NA	False	NA	NA	False	AATACA	-12	NA	118087476	118035501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118035656_118052806_118052942_118063384_118063541_118067394_118067506_118070872_118071031_118072123_118072217_118078775_118078873_118080286_118080442_118082119_118082301_118083766_118083900_118087280
ES.19778.3	chr2	-	999	6	FSM	ENSMUSG00000027344.15	ENSMUST00000028820.7	1025	6	21	5	21	-5	multi-exon	FALSE	canonical	1	2	junction_1	2.68328157299975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTACTCGGTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	118087416	118075149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118075447_118078775_118078873_118080286_118080442_118082119_118082301_118083766_118083900_118087280
ES.19779.1	chr2	+	5276	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-63	-1	-63	1	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTTTTCCATTTGCAG	NA	False	NA	10	True	AATAAA	-16	NA	118219035	118305716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.10	chr2	+	5739	40	NNC	ENSMUSG00000005102.14	novel	5298	40	NA	NA	6	153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.5971353292143	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCCCTTGTGATCAGT	NA	False	NA	NA	False	GATAAA	-18	NA	118219104	118305868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118231441_118231822_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.11	chr2	+	5530	38	NIC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	8	0	intron_retention	FALSE	canonical	3	66	junction_24	14.0271051396044	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219106	118305715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.12	chr2	+	5092	38	NIC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	20.5180887252666	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118219107	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.13	chr2	+	5450	40	NNC	ENSMUSG00000005102.14	novel	5298	40	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	24.4599257652556	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219107	118305715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118253217_118253465_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.14	chr2	+	5236	39	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	20.3111018589776	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118219107	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296797_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.16	chr2	+	2921	18	NIC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	9	-9009	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.2038631135482	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGAACTCAAGGACTT	NA	False	NA	16	True	AATACA	-27	NA	118219107	118273762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.17	chr2	+	4861	21	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	9	25099	9	-2155	5prime_fragment	FALSE	canonical	3	74	junction_19	10.5185550338438	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTTAAGCAAATATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	118219107	118280616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756
ES.19779.19	chr2	+	2937	19	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	20	-9021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4083450351355	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCGTATGGAGATCAGA	NA	False	NA	4	True	AATACA	-15	NA	118219118	118273750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231057_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.2	chr2	+	3034	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-22	31952	-22	-9008	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAACTCAAGGACTTT	NA	False	NA	17	True	AATACA	-28	NA	118219076	118273763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.20	chr2	+	6598	20	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	20	-9023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	30.385792714556	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCGTATGGAGATCA	NA	False	NA	2	True	AATACA	-13	NA	118219118	118273748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118253217_118253917_118254123_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.21	chr2	+	3294	20	ISM	ENSMUSG00000005102.14	ENSMUST00000110874.8	5298	40	-208	31964	21	-9020	5prime_fragment	FALSE	canonical	1	1	junction_2	30.3961836064881	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCGTATGGAGATCAGAA	NA	False	NA	5	True	AATACA	-16	NA	118219119	118273751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118231506_118231822_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.24	chr2	+	3221	19	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	46	31697	46	-8753	5prime_fragment	FALSE	canonical	3	81	junction_8	8.9504810547317	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTGTCACCTCATTTA	NA	False	NA	NA	False	AGTAAA	-14	NA	118219144	118274018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.25	chr2	+	3516	23	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	46	23584	46	-640	5prime_fragment	FALSE	canonical	3	67	junction_22	11.6185943873254	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAAGTGTCTGACCCCA	NA	False	NA	NA	False	AGTAAA	-15	NA	118219144	118282131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892
ES.19779.26	chr2	+	4932	36	ISM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	46	3114	46	-3111	5prime_fragment	FALSE	canonical	3	66	junction_24	13.1083397662927	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGGTCATTTGTGTG	NA	False	NA	NA	False	AAAAAG	-9	NA	118219144	118302601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370
ES.19779.28	chr2	+	4998	39	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2143122824555	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118219267	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231057_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.29	chr2	+	161	1	Intergenic	novelGene_16411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATACATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	118224173	118224334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118224200_118224300
ES.19779.3	chr2	+	5390	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	-21	-157	-21	157	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGTGATCAGTTCTG	NA	False	NA	NA	False	GATAAA	-22	NA	118219077	118305872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.30	chr2	+	4607	35	ISM	ENSMUSG00000005102.14	ENSMUST00000102527.10	4906	38	21769	0	-1465	0	3prime_fragment	FALSE	canonical	3	66	junction_20	14.1887913265351	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118241361	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.31	chr2	+	4580	35	NNC	ENSMUSG00000005102.14	novel	4906	38	NA	NA	-1454	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1040428078928	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118241372	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118241437_118243423_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.32	chr2	+	2316	14	ISM	ENSMUSG00000005102.14	ENSMUST00000110870.8	5116	34	587	31965	587	-9021	5prime_fragment	FALSE	canonical	3	81	junction_3	8.59819714142681	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCGTATGGAGATCAGA	NA	False	NA	4	True	AATACA	-15	NA	118243413	118273750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605
ES.19779.33	chr2	+	5036	33	ISM	ENSMUSG00000005102.14	ENSMUST00000110870.8	5116	34	651	281	651	-278	5prime_fragment	FALSE	canonical	3	66	junction_19	13.188795848655	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCCACTAAGTCTGCC	NA	False	NA	NA	False	ATTAAA	-19	NA	118243477	118305434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512
ES.19779.35	chr2	+	4286	1	NIC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	-8159	6755	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118261163	118265449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118261200_118265400
ES.19779.36	chr2	+	1895	4	ISM	ENSMUSG00000005102.14	ENSMUST00000110869.2	1715	8	6771	-2	6771	2	3prime_fragment	FALSE	canonical	3	67	junction_3	6.54896090146283	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAATTTACAAATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	118276093	118282773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118276795_118278756_118278994_118280790_118280867_118281892
ES.19779.37	chr2	+	1966	18	ISM	ENSMUSG00000005102.14	ENSMUST00000110870.8	5116	34	37962	1	-6852	1	3prime_fragment	FALSE	canonical	3	66	junction_3	17.0815264749027	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTTTTCCATTTGC	NA	False	NA	8	True	AATAAA	-14	NA	118280788	118305714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.38	chr2	+	3853	12	NIC	ENSMUSG00000005102.14	novel	5116	34	NA	NA	672	150	intron_retention	FALSE	canonical	3	79	junction_4	15.1253713840068	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCATCCCTTGTGATC	NA	False	NA	NA	False	GATAAA	-15	NA	118288312	118305865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.4	chr2	+	5179	38	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	25.1679820250075	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTTTTCCATTTG	NA	False	NA	7	True	AATAAA	-13	NA	118219077	118305713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294549_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118304512_118304632_118305483
ES.19779.5	chr2	+	5521	21	NNC	ENSMUSG00000005102.14	novel	5298	40	NA	NA	-21	-6075	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	35.1068369409721	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGCCAAGCGCTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	118219077	118276696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118231506_118231822_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118274985_118275744
ES.19779.6	chr2	+	5539	40	FSM	ENSMUSG00000005102.14	ENSMUST00000110874.8	5298	40	-244	3	-15	0	multi-exon	FALSE	canonical	1	1	junction_2	24.5048801644441	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCTGTTTTCCATTT	NA	False	NA	6	True	AATAAA	-12	NA	118219083	118305712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118219334_118231015_118231129_118231506_118231822_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.8	chr2	+	5204	39	NNC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.2983290116408	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTTTTCCATTTGC	NA	False	NA	8	True	AATAAA	-14	NA	118219096	118305714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247716_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.19779.9	chr2	+	6393	38	NIC	ENSMUSG00000005102.14	novel	5212	39	NA	NA	-2	0	intron_retention	FALSE	canonical	3	66	junction_24	13.9431172492644	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTTTTCCATTTG	NA	False	NA	7	True	AATAAA	-13	NA	118219096	118305713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ES.1978.1	chr1	+	5499	1	Genic_Genomic	ENSMUSG00000015962.6	novel	NA	NA	NA	NA	22285	4273	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGACAGGTTTACAGCC	NA	False	NA	NA	False	NA	NA	NA	177579664	177585163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_177579700_177585200
ES.19780.1	chr2	-	10026	1	Intergenic	novelGene_16410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGGGTCTCCCTGAG	NA	False	NA	NA	False	CATAAA	-38	NA	118230379	118220353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118220400_118230400
ES.19781.1	chr2	-	2829	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	68	-2099	5	2099	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGTCTTGTGTGCTTGT	NA	False	NA	NA	False	AGTAAA	-6	NA	118310124	118304231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ES.19781.2	chr2	-	1061	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	71	-334	-5	334	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTAATCTCCGTGGTC	NA	False	NA	NA	False	AATAAA	-24	NA	118310121	118305996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ES.19781.3	chr2	-	813	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	17	-32	17	32	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAAAAAATGCATC	NA	False	NA	30	True	NA	NA	NA	118310175	118306298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ES.19781.4	chr2	-	1278	4	NIC	ENSMUSG00000009549.15	novel	798	5	NA	NA	-23	1	intron_retention	FALSE	canonical	3	1463	junction_1	15.1730755689881	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGTTTGTTTTTCTTGG	NA	False	NA	-1	True	ATTAAA	-17	NA	118310152	118306329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118307341_118309401_118309515_118309858_118309932_118310071
ES.19781.5	chr2	-	745	4	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	698.728845833632	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTGGTTTGTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-15	NA	118310152	118306331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118306799_118309390_118309515_118309858_118309932_118310071
ES.19781.6	chr2	-	2891	3	NNC	ENSMUSG00000009549.15	novel	587	3	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	733.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTGGTTTGTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-15	NA	118310147	118306331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118308035_118308819_118309932_118310071
ES.19782.1	chr2	-	5077	6	NNC	ENSMUSG00000040093.17	novel	4642	5	NA	NA	-38057	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	1.01980390271856	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTCTTTATTTTTTCT	NA	False	NA	0	True	AATAAA	-15	NA	118418225	118359238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118417483_118418029_118418186
ES.19782.2	chr2	-	4604	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	36	2	11	-2	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTTCTTTATTTTTTC	NA	False	NA	-1	True	AATAAA	-14	NA	118380132	118359239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
ES.19782.3	chr2	-	3169	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	2	1471	2	4	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTCTTGGAGGCAGCTG	NA	False	NA	NA	False	AATAAA	-22	NA	118380166	118360708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
ES.19782.4	chr2	-	2814	5	FSM	ENSMUSG00000040093.17	ENSMUST00000090219.13	4642	5	-30	1858	-30	-383	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAACCTTGTACTTCA	NA	False	NA	NA	False	AATACA	-32	NA	118380198	118361095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118363141_118375562_118375727_118377196_118377494_118379521_118379652_118380020
ES.19782.5	chr2	-	1591	5	NNC	ENSMUSG00000040093.17	novel	4642	5	NA	NA	5	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.69258240356725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATCTGTCTGCATCCA	NA	False	NA	NA	False	NA	NA	NA	118380163	118362302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118363160_118375562_118375727_118377196_118377494_118379521_118379652_118380020
ES.19782.6	chr2	-	1989	1	Intergenic	novelGene_16412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118392912	118390923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118390900_118392900
ES.19782.7	chr2	-	4774	2	Intergenic	novelGene_16413	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTTCTGTTATTATA	NA	False	NA	NA	False	NA	NA	NA	118396585	118391545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118393906_118394171
ES.19783.1	chr2	+	3691	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	-19	-4	-19	4	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGGCAATTCATCTA	NA	False	NA	19	True	AATAAA	-20	NA	118428672	118472076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.11	chr2	+	3741	24	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.044752537303	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428734	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430623_118430766_118435894_118435955_118437024_118437170_118437954_118438076_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.12	chr2	+	3558	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	43	-7	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	133.533828847645	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACATTTCTGTTGCTGG	NA	False	NA	8	True	AATAAA	-9	NA	118428734	118472065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.13	chr2	+	3582	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	136.800610469374	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428735	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448228_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.14	chr2	+	3793	24	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	170.801081529936	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118428735	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118455062_118455235_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.15	chr2	+	3617	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	135.664244331668	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428735	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445417_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.17	chr2	+	3556	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	136.949529220509	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTTCTGTTGCTGGCA	NA	False	NA	10	True	AATAAA	-11	NA	118428735	118472067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462302_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.18	chr2	+	4402	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-1	intron_retention	FALSE	canonical	3	422	junction_10	75.8969345309928	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428735	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.19	chr2	+	3631	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	136.025193643623	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428735	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430773_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.20	chr2	+	3251	21	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	178.69932148724	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTGTTGCTGGCAA	NA	False	NA	11	True	AATAAA	-12	NA	118428735	118472068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453547_118453667_118454761_118454812_118456503_118456562_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.21	chr2	+	2878	18	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.709839603521	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428735	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428913_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.23	chr2	+	3569	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	137.026366829934	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTGTTGCTGGCAA	NA	False	NA	11	True	AATAAA	-12	NA	118428735	118472068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461476_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.24	chr2	+	4237	21	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	50	-1	intron_retention	FALSE	canonical	3	24	junction_2	136.79045105562	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428741	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.26	chr2	+	1874	11	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	51	18214	51	-8453	5prime_fragment	FALSE	canonical	3	422	junction_10	57.8639784321818	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACAGTGGTACATGCC	NA	False	NA	NA	False	AATAAA	-16	NA	118428742	118453858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550
ES.19783.28	chr2	+	3698	24	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	170.161004598064	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTGCTGGCAATT	NA	False	NA	13	True	AATAAA	-14	NA	118428745	118472070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118455148_118455235_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.29	chr2	+	3604	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	54	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	135.944081844079	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTGTTGCTGGCAA	NA	False	NA	11	True	AATAAA	-12	NA	118428745	118472068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462987_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.32	chr2	+	3476	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	55	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	140.17216495319	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118428746	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.33	chr2	+	3596	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	135.772263139481	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428754	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435946_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.36	chr2	+	3398	21	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	176.545178353871	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428759	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453547_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.38	chr2	+	4278	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	68	-2	intron_retention	FALSE	canonical	3	422	junction_10	75.3867127721128	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTGCTGGCAATT	NA	False	NA	13	True	AATAAA	-14	NA	118428759	118472070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.4	chr2	+	3507	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	138.583079202585	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428704	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.41	chr2	+	3695	24	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	71	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	169.035281157492	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428762	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118466409_118466509_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.42	chr2	+	3727	24	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	170.646142236247	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428767	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465056_118465185_118465601_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.43	chr2	+	4409	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	80	-1	intron_retention	FALSE	canonical	3	455	junction_10	70.2846818868558	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428771	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.46	chr2	+	7188	20	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	89	0	intron_retention	FALSE	canonical	3	459	junction_6	69.74842009152	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428780	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.47	chr2	+	4342	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	98	0	intron_retention	FALSE	canonical	3	422	junction_10	75.1953465053152	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428789	118472072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.48	chr2	+	3212	20	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	8330	1	6423	-1	3prime_fragment	FALSE	canonical	3	422	junction_7	77.6105056143655	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118437021	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.49	chr2	+	2960	19	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	9756	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	147.757402521836	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118440354	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457344_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.5	chr2	+	2466	16	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	23	10371	23	-610	5prime_fragment	FALSE	canonical	3	422	junction_10	53.0531808659952	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTCAGGTTAGCAGT	NA	False	NA	NA	False	AATAAA	-42	NA	118428714	118461701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425
ES.19783.50	chr2	+	2700	17	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	16718	3	14811	-3	3prime_fragment	FALSE	canonical	3	422	junction_4	77.8247229355813	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118445409	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.51	chr2	+	3607	16	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	14953	-1	intron_retention	FALSE	canonical	0	0	junction_9	239.773077906776	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118445551	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118454812_118455148_118455235_118456503_118456562_118457333_118457443_118460383_118460647_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.52	chr2	+	2484	16	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	17232	3	-15134	-3	3prime_fragment	FALSE	canonical	3	422	junction_3	80.2452906198655	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118445923	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.53	chr2	+	5112	13	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	-12803	-1	intron_retention	FALSE	canonical	3	422	junction_2	82.0739842391539	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118448254	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118448417_118452615_118452729_118453550_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19783.6	chr2	+	4984	22	ISM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	31	1	31	-1	intron_retention	FALSE	canonical	3	422	junction_10	67.1555543549871	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGCTGGCAATTC	NA	False	NA	14	True	AATAAA	-15	NA	118428722	118472071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113
ES.19783.9	chr2	+	5518	22	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	43	-3	intron_retention	FALSE	canonical	0	0	junction_4	179.617974546105	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	False	NA	12	True	AATAAA	-13	NA	118428734	118472069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118437954_118438076_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ES.19784.1	chr2	+	179	1	Intergenic	novelGene_16414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGGTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	118484178	118484357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118484200_118484400
ES.19785.1	chr2	+	1868	1	Genic_Genomic	ENSMUSG00000074923.11	novel	NA	NA	NA	NA	-170	44	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAACCAAAAACTGTG	NA	False	NA	NA	False	NA	NA	NA	118493613	118495481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_118493600_118495500
ES.19785.2	chr2	+	3984	11	NNC	ENSMUSG00000074923.11	novel	4411	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.3685438564654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGGTTTTTCATTCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	118494210	118528501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118494509_118495267_118495348_118508203_118508310_118519277_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
ES.19785.3	chr2	+	3691	10	FSM	ENSMUSG00000074923.11	ENSMUST00000110853.8	3677	10	-14	0	-14	0	multi-exon	FALSE	canonical	1	2	junction_3	1.56347191994114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGGTTTTTCATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	118507695	118528499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118507783_118508203_118508310_118519277_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
ES.19786.1	chr2	+	3086	1	FSM	ENSMUSG00000074918.5	ENSMUST00000149978.2	3053	1	-30	-3	-30	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGTTGGTCATTTCT	NA	False	NA	7	True	AATACA	-23	NA	118576208	118579294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118576200_118579300
ES.19786.2	chr2	+	1584	2	Genic_Genomic	ENSMUSG00000074918.5	novel	3053	1	NA	NA	6	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGTGTAAGTTGGTC	NA	False	NA	1	True	AATACA	-17	NA	118576244	118579288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_118577521_118578980
ES.19787.1	chr2	-	1465	1	Antisense	novelGene_ENSMUSG00000074918.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	118579209	118577744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_118577700_118579200
ES.19788.1	chr2	+	178	1	Intergenic	novelGene_16415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	118584419	118584597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118584400_118584600
ES.19789.1	chr2	-	4638	11	NNC	ENSMUSG00000045838.10	novel	4703	11	NA	NA	-1928	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.4	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTTTATCTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	118595070	118584636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118588238_118588319_118588360_118588893_118588985_118589070_118589125_118589681_118589738_118589988_118590189_118590801_118590931_118591006_118591163_118591769_118591878_118592125_118592240_118594981
ES.19789.2	chr2	-	5187	6	NNC	ENSMUSG00000045838.10	novel	4703	11	NA	NA	1655	0	intron_retention	FALSE	canonical	0	0	junction_1	0.4	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGTCTTTATCTGCTT	NA	False	NA	NA	False	NA	NA	NA	118591451	118584638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118588985_118589070_118589125_118589681_118589738_118590031_118590189_118590801_118590931_118591006
ES.19789.3	chr2	-	4679	11	FSM	ENSMUSG00000045838.10	ENSMUST00000059997.10	4703	11	24	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_2	0.66332495807108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGTCTTTATCTGCTT	NA	False	NA	NA	False	NA	NA	NA	118593118	118584638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118588238_118588319_118588360_118588893_118588985_118589070_118589125_118589681_118589738_118589988_118590189_118590801_118590931_118591006_118591163_118591769_118591878_118592125_118592240_118592986
ES.19789.5	chr2	-	4693	11	NNC	ENSMUSG00000045838.10	novel	4703	11	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.458257569495584	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGAGGTCTTTATCTG	NA	False	NA	NA	False	NA	NA	NA	118593155	118584641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118588238_118588319_118588360_118588893_118588985_118589070_118589125_118589681_118589738_118589988_118590189_118590801_118590931_118591006_118591163_118591769_118591878_118592125_118592240_118593006
ES.1979.1	chr1	+	2416	1	Antisense	novelGene_ENSMUSG00000015961.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTTTGTGCTTCAAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	177611528	177613944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_177611500_177613900
ES.19790.1	chr2	+	1399	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	188	3015	-41	39	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAACCCAGTGTGGTGGC	NA	False	NA	60	True	AATGAA	-9	NA	118644671	118665162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.10	chr2	+	3900	8	NNC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	-23	19	intron_retention	FALSE	non_canonical	0	0	junction_1	144.86193285966	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGGAATGAAAGTAGCCT	NA	False	NA	40	True	AATAAA	-33	NA	118644689	118665142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118644792_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118662109_118664480
ES.19790.15	chr2	+	3290	5	NNC	ENSMUSG00000027331.16	novel	1241	8	NA	NA	-22	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	174.750357653425	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTCATGGACTTTCAG	NA	False	NA	26	True	ATTAAA	-26	NA	118644690	118667699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118664776
ES.19790.16	chr2	+	3249	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	208	1145	-21	-592	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGGTCTCACTCTTAT	NA	False	NA	NA	False	NA	NA	NA	118644691	118667032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.17	chr2	+	1487	10	FSM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	-71	-577	-7	3	multi-exon	FALSE	canonical	2	5	junction_7	167.506403046953	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTGACTAACACTAG	NA	False	NA	24	True	AATAAA	-17	NA	118644705	118665126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118661292_118661451_118662033_118662109_118664480
ES.19790.18	chr2	+	1226	8	NIC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	145.887432142535	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTAATATTCTGACTAA	NA	False	NA	18	True	AATAAA	-11	NA	118644710	118665120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118644791_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.19	chr2	+	4422	6	ISM	ENSMUSG00000027331.16	ENSMUST00000134579.8	799	8	1143	-333	1079	-60	3prime_fragment	FALSE	canonical	3	404	junction_2	9.08625335328044	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTAGCACCTACCTAA	NA	False	NA	7	True	AATAAA	-16	NA	118645855	118665063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.2	chr2	+	2883	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	192	1527	-37	-974	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAACCTGCCTTCCATGC	NA	False	NA	9	True	NA	NA	NA	118644675	118666650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.20	chr2	+	2918	6	NNC	ENSMUSG00000027331.16	novel	495	3	NA	NA	6592	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.143272241265	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAGCTTTGGAAATAA	NA	False	NA	-13	True	AATAAA	-42	NA	118651368	118665089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118651965_118652518_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.21	chr2	+	897	5	NNC	ENSMUSG00000027331.16	novel	839	10	NA	NA	-7815	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	207.03924748704	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTGACTAACACTAG	NA	False	NA	24	True	AATAAA	-17	NA	118654248	118665126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118654268_118659439_118659496_118661349_118661451_118662033_118662109_118664480
ES.19790.22	chr2	+	1935	2	ISM	ENSMUSG00000027331.16	ENSMUST00000176463.2	495	3	-1352	2606	-1352	-105	5prime_fragment	FALSE	canonical	3	423	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTGAAGTTTTTTTG	NA	False	NA	-38	True	NA	NA	NA	118660711	118665018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118662109_118664480
ES.19790.23	chr2	+	2288	3	ISM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	16625	-2095	-662	-980	3prime_fragment	FALSE	canonical	3	13	junction_1	205	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTTAACCTGCCTT	NA	False	NA	3	True	NA	NA	NA	118661401	118666644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118661451_118662033_118662109_118664480
ES.19790.24	chr2	+	5267	2	NNC	ENSMUSG00000027331.16	novel	452	2	NA	NA	-589	8894	intron_retention	FALSE	non_canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGGTTGCTGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	118661474	118693332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118666726_118693316
ES.19790.25	chr2	+	3767	1	NIC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	-634	64	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTCAAAAGACTTCTCA	179	False	NA	15	True	ATTAAA	-15	NA	118663921	118667688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118663900_118667700
ES.19790.26	chr2	+	2119	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	-7	1553	-7	341	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGCCCAAAGCCGTGTT	NA	False	NA	49	True	ATTAAA	-21	NA	118692427	118711837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.27	chr2	+	3647	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	16	2	16	-2	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAAAAGTGGATGGGA	NA	False	NA	NA	False	AATAAA	-18	NA	118692450	118713388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.28	chr2	+	2546	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	17	897	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGGCATATCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	118692451	118712393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
ES.19790.29	chr2	+	2004	11	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	30	334	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	63.3978706267017	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTCTGCGCCCAAAG	NA	False	NA	42	True	ATTAAA	-14	NA	118692464	118711830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708321_118708429_118710933
ES.19790.3	chr2	+	1349	10	NNC	ENSMUSG00000027331.16	novel	839	10	NA	NA	-37	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.617252684423	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTAGCACCTACCTAA	NA	False	NA	7	True	AATAAA	-16	NA	118644675	118665063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118662197_118662251_118664480
ES.19790.30	chr2	+	3992	9	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-35	333	intron_retention	FALSE	canonical	3	32	junction_7	63.6669802566448	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTTCTGCGCCCAAA	NA	False	NA	41	True	ATTAAA	-13	NA	118692473	118711829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118707451_118708355_118708429_118710933
ES.19790.31	chr2	+	1682	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	40	1943	-34	-49	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTGTGGTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	118692474	118711447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.32	chr2	+	3492	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	-26	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGACAAAATAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	118692476	118713364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
ES.19790.33	chr2	+	1103	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	303	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	89.5624480391499	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	118692476	118707750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706878_118707368_118707451_118707622
ES.19790.34	chr2	+	1096	10	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.6920917631333	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	118692476	118707730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118707622
ES.19790.35	chr2	+	4133	11	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	301	intron_retention	FALSE	canonical	0	0	junction_6	83.8825965263355	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCATTTTGTATTAAA	NA	False	NA	9	True	NA	NA	NA	118692476	118711797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118703860_118703932_118705145_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.36	chr2	+	2540	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	333	intron_retention	FALSE	canonical	3	195	junction_9	14.4848196398851	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTTCTGCGCCCAAA	NA	False	NA	41	True	ATTAAA	-13	NA	118692476	118711829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.37	chr2	+	1965	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-32	341	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGCCCAAAGCCGTGTT	NA	False	NA	49	True	ATTAAA	-21	NA	118692476	118711837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
ES.19790.38	chr2	+	4174	12	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-20	897	intron_retention	FALSE	canonical	0	0	junction_6	81.9470701980833	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGGCATATCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	118692488	118712393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118705243_118705844_118706045_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.39	chr2	+	3715	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	194	junction_8	14.6232691283447	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGAAAAGTGGATGG	NA	False	NA	NA	False	AATAAA	-16	NA	118692489	118713386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708429_118710933
ES.19790.40	chr2	+	1467	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-16	-141	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	56.9639359595174	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGGTACCCGACTCCTT	NA	False	NA	NA	False	NA	NA	NA	118692492	118711355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708355_118708429_118710933
ES.19790.41	chr2	+	2608	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	62	995	-12	899	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCATATCTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	118692496	118712395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.42	chr2	+	2279	11	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-12	331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.4884385337139	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAACCCTTCTGCGCCCA	NA	False	NA	39	True	ATTAAA	-11	NA	118692496	118711827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118707201_118707368_118707451_118708321_118708429_118710933
ES.19790.43	chr2	+	3640	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-11	337	intron_retention	FALSE	canonical	3	194	junction_7	15.2459830775191	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGCGCCCAAAGCCG	NA	False	NA	45	True	ATTAAA	-17	NA	118692497	118711833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118700211_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.45	chr2	+	3503	11	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-9	-26	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	63.3978706267017	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGACAAAATAAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	118692499	118713364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708321_118708429_118710933
ES.19790.46	chr2	+	2898	14	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-9	-879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.8364692414378	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGCTCAAACTCTGC	NA	False	NA	NA	False	NA	NA	NA	118692499	118712511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118703881_118703932_118705145_118705243_118706796_118706891_118707073_118707201_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.47	chr2	+	3575	12	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.5067788447496	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGAAAAGTGGATGG	NA	False	NA	NA	False	AATAAA	-16	NA	118692499	118713386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118703881_118703932_118705145_118705243_118706796_118706891_118707368_118707451_118708321_118708429_118710933
ES.19790.48	chr2	+	1995	11	NIC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	-7	343	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.855531760984	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCCAAAGCCGTGTTCT	NA	False	NA	51	True	ATTAAA	-23	NA	118692501	118711839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118692649_118699915_118700006_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.49	chr2	+	2048	8	NNC	ENSMUSG00000027332.12	novel	3665	12	NA	NA	193	350	intron_retention	FALSE	canonical	0	0	junction_2	91.2484833533452	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGTGTTCTGCAGGAG	NA	False	NA	58	True	ATTAAA	-30	NA	118703440	118711846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118703460_118703648_118703786_118703881_118703932_118705145_118705243_118706796_118707451_118708141_118708247_118708355_118708429_118710933
ES.19790.5	chr2	+	1426	10	NNC	ENSMUSG00000027331.16	novel	839	10	NA	NA	-29	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.816340618286	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTACAACTAGAGCTTT	NA	False	NA	-21	True	AATAAA	-34	NA	118644683	118665081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118660117_118660238_118662033_118662109_118664480
ES.19790.6	chr2	+	3920	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	200	482	-29	71	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTTCTCATGGACTT	NA	False	NA	22	True	ATTAAA	-22	NA	118644683	118667695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.7	chr2	+	1237	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	206	3159	-23	-105	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTGAAGTTTTTTTG	NA	False	NA	-38	True	NA	NA	NA	118644689	118665018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19790.9	chr2	+	2998	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	206	1398	-23	-845	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTCTCTCTGCCCAGA	NA	False	NA	NA	False	TATAAA	-12	NA	118644689	118666779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ES.19791.1	chr2	-	3937	2	NNC	ENSMUSG00000086421.2	novel	874	2	NA	NA	-2934	-133	intron_retention	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTAATTACTTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	118667537	118660487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118660976_118664088
ES.19791.2	chr2	-	7050	1	Genic_Genomic	ENSMUSG00000086421.2	novel	NA	NA	NA	NA	-2934	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTAATTACTTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	118667537	118660487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_118660500_118667500
ES.19791.3	chr2	-	4678	2	NNC	ENSMUSG00000086421.2	novel	874	2	NA	NA	-2934	-133	intron_retention	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTAATTACTTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	118667537	118660487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118662106_118664477
ES.19792.1	chr2	-	1225	4	Antisense	novelGene_ENSMUSG00000027332.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATAGGCTACTGTGTATG	1167	False	NA	NA	False	AATATA	-24	NA	118727437	118703058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_118703441_118724178_118724586_118725157_118725375_118727218
ES.19793.1	chr2	+	4630	7	NNC	ENSMUSG00000040007.9	novel	662	2	NA	NA	-2706	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	16.86877457184	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118728151	118755009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118728493_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ES.19793.11	chr2	+	4597	7	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.1475434517549	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTTATTTTCTGT	NA	False	NA	16	True	AATAAA	-26	NA	118731913	118755003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118732239_118746368_118747791_118749613_118750001_118750683_118750838_118751236_118751314_118752085_118752178_118752863
ES.19793.13	chr2	+	4208	5	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15196	6	15196	-6	intron_retention	FALSE	canonical	3	30	junction_4	6.68954408012983	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTTATTTTCTGT	142	False	NA	16	True	AATAAA	-26	NA	118747129	118755003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076
ES.19793.14	chr2	+	4604	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	-2514	0	-2514	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAACTCTGTAATTCCC	7198	False	NA	8	True	AATAAA	-19	NA	118754462	118759066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118754500_118759100
ES.19793.2	chr2	+	4568	7	NNC	ENSMUSG00000040007.9	novel	662	2	NA	NA	-217	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	14.9182960004002	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATTTTCTGTGTGTTTT	NA	False	NA	23	True	AATAAA	-33	NA	118730640	118755010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
ES.19793.3	chr2	+	4551	7	NIC	ENSMUSG00000040007.9	novel	662	2	NA	NA	-187	5	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.733376963276	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGTGTTTTGTTT	NA	False	NA	27	True	AATAAA	-37	NA	118730670	118755014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ES.19793.5	chr2	+	4660	7	FSM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	-66	0	-66	0	multi-exon	FALSE	canonical	3	30	junction_5	7.79779171019306	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118731867	118755009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ES.19793.7	chr2	+	5414	6	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-60	0	intron_retention	FALSE	canonical	1	3	junction_2	17.5567650778838	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118731873	118755009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118732239_118746368_118747791_118749616_118749997_118750677_118750838_118751236_118752178_118752863
ES.19793.8	chr2	+	4643	7	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.1609575646365	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118731875	118755009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
ES.19794.1	chr2	-	229	1	Intergenic	novelGene_16416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATCAGAGGAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	118765864	118765635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118765600_118765900
ES.19795.1	chr2	+	158	1	Intergenic	novelGene_16417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	229	False	NA	NA	False	NA	NA	NA	118773002	118773160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118773000_118773200
ES.19796.1	chr2	-	171	1	Intergenic	novelGene_16418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAACATATCTATTG	NA	False	NA	NA	False	NA	NA	NA	118776974	118776803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118776800_118777000
ES.19797.1	chr2	+	177	1	Intergenic	novelGene_16419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTATGGAAATCTGAT	NA	False	NA	NA	False	NA	NA	NA	118797376	118797553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118797400_118797600
ES.19798.1	chr2	-	159	1	Intergenic	novelGene_16420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	118817065	118816906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118816900_118817100
ES.19799.1	chr2	+	162	2	Intergenic	novelGene_16421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACGTCTTATGGG	4963	False	NA	NA	False	NA	NA	NA	118819212	118860708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118819314_118860647
ES.19799.2	chr2	+	174	1	Intergenic	novelGene_16425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACGTCTTATGGG	NA	False	NA	NA	False	NA	NA	NA	118860534	118860708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118860500_118860700
ES.198.1	chr1	-	536	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	25	-69	25	69	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATTAGTAAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	24655253	24654717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24654700_24655300
ES.198.2	chr1	-	141	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	24	327	24	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACATGAGCAAAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	24655254	24655113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_24655100_24655300
ES.1980.1	chr1	+	3603	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACACTAAAACCCACGTG	NA	False	NA	NA	False	NA	NA	NA	177619498	177623101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_177619500_177623100
ES.19800.1	chr2	-	179	1	Intergenic	novelGene_16422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	118840301	118840122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118840100_118840300
ES.19801.1	chr2	-	313	1	Intergenic	novelGene_16423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	118845611	118845298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118845300_118845600
ES.19802.1	chr2	-	1847	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	-5	-21	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	118859863	118848280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
ES.19802.2	chr2	-	1836	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	10	24	-6	-24	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATAAAATAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	118859864	118848283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ES.19802.3	chr2	-	4382	3	FSM	ENSMUSG00000039983.14	ENSMUST00000110833.2	732	3	-6	-3644	-6	-382	multi-exon	FALSE	canonical	3	33	junction_2	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859864	118848641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118852707_118857618_118857869_118859797
ES.19802.4	chr2	-	1478	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	9	383	-7	-383	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTGTGTAGTGTGTGT	NA	False	NA	-3	True	TATAAA	-14	NA	118859865	118848642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ES.19802.5	chr2	-	4370	3	FSM	ENSMUSG00000039983.14	ENSMUST00000110834.8	828	3	30	-3572	14	-383	multi-exon	FALSE	canonical	3	12	junction_2	21.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTGTGTAGTGTGTGT	NA	False	NA	-3	True	TATAAA	-14	NA	118859844	118848642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118852707_118857618_118857869_118859788
ES.19802.6	chr2	-	176	1	Intergenic	novelGene_16424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGCAGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	118855848	118855672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118855700_118855800
ES.19803.1	chr2	+	5138	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	0	-2432	0	2432	multi-exon	FALSE	canonical	3	106	junction_2	2.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCATAAACATTAATGCT	3255	False	NA	NA	False	NA	NA	NA	118865270	118872682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.10	chr2	+	3333	3	NNC	ENSMUSG00000027324.2	novel	2706	3	NA	NA	42	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACATACAACCATCC	3297	False	NA	NA	False	AATAAA	-16	NA	118865312	118871165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118865704_118867398_118867696_118868520
ES.19803.2	chr2	+	3630	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	2	-926	2	926	multi-exon	FALSE	canonical	3	106	junction_2	2.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCATCCATTGCAATTCT	3257	False	NA	NA	False	AATAAA	-27	NA	118865272	118871176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.3	chr2	+	6052	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	7	-3353	7	3353	multi-exon	FALSE	canonical	3	106	junction_2	2.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTACCTGCTTTTTTTCA	3262	False	NA	NA	False	AATACA	-2	NA	118865277	118873603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.4	chr2	+	3653	3	NNC	ENSMUSG00000027324.2	novel	2706	3	NA	NA	8	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACATACAACCATCC	3263	False	NA	NA	False	AATAAA	-16	NA	118865278	118871165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118865990_118867398_118867696_118868520
ES.19803.5	chr2	+	3339	2	NIC	ENSMUSG00000027324.2	novel	2706	3	NA	NA	8	-808	intron_retention	FALSE	canonical	3	106	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTATGTCCATTTTTAC	3263	False	NA	NA	False	GGGGCT	-35	NA	118865278	118869442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118867696_118868520
ES.19803.6	chr2	+	4121	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	10	-1425	10	1425	multi-exon	FALSE	canonical	3	106	junction_2	2.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAATGGGAGCCAAGT	3265	False	NA	NA	False	AATAAA	-28	NA	118865280	118871675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.7	chr2	+	1880	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	14	812	14	-812	multi-exon	FALSE	canonical	3	106	junction_2	2.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTTGTATGTCCATTT	3269	False	NA	NA	False	GGGGCT	-31	NA	118865284	118869438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.8	chr2	+	2092	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	14	600	14	-600	multi-exon	FALSE	canonical	3	106	junction_2	2.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTGCTTTTTTTTTTT	3269	False	NA	2	True	NA	NA	NA	118865284	118869650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19803.9	chr2	+	3174	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	32	-500	32	500	multi-exon	FALSE	canonical	3	106	junction_2	2.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTGCCTCTGTGTGTA	3287	False	NA	NA	False	NA	NA	NA	118865302	118870750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118865950_118867398_118867696_118868520
ES.19804.1	chr2	+	7481	24	NIC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	0	619	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGTAGTGCACAAAGA	7211	False	NA	57	True	AATACA	-23	NA	118877599	118935221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.10	chr2	+	8389	25	NNC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	-1	4116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	19.2411595862157	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGTGATGCCTTGATT	7241	False	NA	10	True	AATAAA	-16	NA	118877629	118940098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934818_118938419
ES.19804.11	chr2	+	7537	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	17.3749500398962	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCCTTCGGTATAG	7241	False	NA	4	True	AATATA	-37	NA	118877629	118935927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934795_118935414
ES.19804.12	chr2	+	6941	22	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	-1645	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.8822644566084	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGTCTTTTAT	7241	False	NA	NA	False	TATAAA	-16	NA	118877629	118932957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462
ES.19804.13	chr2	+	1972	14	NNC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4132599296584	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGCGTGGTAGCGCA	7241	False	NA	55	True	TATAAA	-12	NA	118877629	118935978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877705_118912055_118912107_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935423
ES.19804.14	chr2	+	6585	2	NNC	ENSMUSG00000027326.14	novel	5527	8	NA	NA	-1	-12028	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACATTGACTGTTAG	7241	False	NA	NA	False	NA	NA	NA	118877629	118884425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118883406_118883616
ES.19804.15	chr2	+	7074	24	NNC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	-1	609	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	19.4955280607305	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTATAAGGAGGTAG	7241	False	NA	47	True	AATACA	-13	NA	118877629	118935211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931223_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.16	chr2	+	7550	9	NNC	ENSMUSG00000027326.14	novel	5527	8	NA	NA	-1	4115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.2622859338389	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGGTGATGCCTTGAT	7241	False	NA	9	True	AATAAA	-15	NA	118877629	118940097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118902752_118937426
ES.19804.18	chr2	+	7016	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	3	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	17.3749500398962	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTCGGTATAGGTCA	7245	False	NA	8	True	AATATA	-41	NA	118877633	118935931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934569_118935709
ES.19804.19	chr2	+	5751	13	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	3	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.6211026503441	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCCTTCGGTATAGG	7245	False	NA	5	True	AATATA	-38	NA	118877633	118935928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877708_118887761_118887813_118888463_118888514_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908464_118935409
ES.19804.2	chr2	+	6658	24	NIC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	0	130	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.2823274408149	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCGGGGTCAATATTG	7211	False	NA	NA	False	NA	NA	NA	118877599	118934732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.20	chr2	+	7337	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	4	510	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGCTTGTTGATAGAC	7246	False	NA	-52	True	ATTAAA	-28	NA	118877634	118935112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.21	chr2	+	5855	15	ISM	ENSMUSG00000027326.14	ENSMUST00000099542.9	6525	24	35	14984	4	-14984	5prime_fragment	FALSE	canonical	3	17	junction_1	14.9319886724537	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGTGACCTGAGTTT	7246	False	NA	NA	False	NA	NA	NA	118877634	118919618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279
ES.19804.22	chr2	+	6054	12	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	4	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.0422636497154	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCCTTCGGTATAGG	7246	False	NA	5	True	AATATA	-38	NA	118877634	118935928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908450_118935375
ES.19804.23	chr2	+	7242	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	4	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.3749500398962	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATATGTGGTAATGAAA	7246	False	NA	-15	True	AATATA	-18	NA	118877634	118935908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118901109_118901999_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.24	chr2	+	8573	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	4	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	17.3749500398962	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCTTTATAATTAGTAT	7246	False	NA	NA	False	ATTAAA	-17	NA	118877634	118936962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935416
ES.19804.25	chr2	+	8084	23	NIC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	19	-57	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.3681574314025	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	7261	False	NA	2	True	AATATA	-35	NA	118877649	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.26	chr2	+	7184	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	22	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	19.143056109781	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	7264	False	NA	2	True	AATATA	-35	NA	118877652	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935416
ES.19804.28	chr2	+	6945	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	29	143	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATATTTATCTTTT	7271	False	NA	NA	False	NA	NA	NA	118877659	118934745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.29	chr2	+	7562	25	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	32	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	17.3749500398962	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTAGCGCATGCCTTTG	7274	False	NA	63	True	TATAAA	-20	NA	118877662	118935986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935423
ES.19804.3	chr2	+	8226	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	11.4505594583524	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCGTGGTAGCGCATGCC	7227	False	NA	59	True	TATAAA	-16	NA	118877615	118935982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.30	chr2	+	4427	9	NNC	ENSMUSG00000027326.14	novel	5527	8	NA	NA	74	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.2622859338389	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	7316	False	NA	2	True	AATATA	-35	NA	118877704	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118901872_118935422
ES.19804.31	chr2	+	4404	2	Intergenic	novelGene_16426	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACATTGACTGTTAG	9420	False	NA	NA	False	NA	NA	NA	118879808	118884425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118883404_118883616
ES.19804.32	chr2	+	178	1	Intergenic	novelGene_16429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTATACAGGTA	NA	False	NA	NA	False	NA	NA	NA	118890335	118890513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118890300_118890500
ES.19804.33	chr2	+	6798	18	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	10872	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.1278705695629	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	NA	False	NA	2	True	AATATA	-35	NA	118898633	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934818_118935413
ES.19804.34	chr2	+	5909	18	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	11986	4114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	19.1278705695629	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTGGTGATGCCTTGA	NA	False	NA	8	True	AATAAA	-14	NA	118899747	118940096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934569_118939110
ES.19804.35	chr2	+	5471	18	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	12181	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.1278705695629	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	NA	False	NA	2	True	AATATA	-35	NA	118899942	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934809_118935422
ES.19804.36	chr2	+	5092	17	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	13144	-57	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	19.5055080361933	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	517	False	NA	2	True	AATATA	-35	NA	118900905	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931223_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.37	chr2	+	7992	15	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	13327	-74	intron_retention	FALSE	canonical	3	50	junction_5	9.6837756171899	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATATGTGGTAATGAAA	700	False	NA	-15	True	AATATA	-18	NA	118901088	118935908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118928000_118930242_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.38	chr2	+	3660	18	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	14041	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.1278705695629	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTAGCGCATG	160	False	NA	57	True	TATAAA	-14	NA	118901802	118935980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935422
ES.19804.39	chr2	+	2727	11	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	31524	995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	23.9125490067454	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATCTCTATTAAGAGTAC	NA	False	NA	NA	False	ATTAAA	-32	NA	118919285	118936977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934794_118935409
ES.19804.4	chr2	+	7885	24	NIC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.2823274408149	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTAGCGCATG	7232	False	NA	57	True	TATAAA	-14	NA	118877620	118935980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.40	chr2	+	2286	6	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	42498	978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	27.1955878774481	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCCTTTATAATTAGT	3667	False	NA	NA	False	ATTAAA	-15	NA	118930259	118936960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458_118934803_118935422
ES.19804.42	chr2	+	2893	2	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	46696	4994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTGTCCTTTGCCTCT	7865	False	NA	NA	False	AATAAA	-20	NA	118934457	118940976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118934796_118938421
ES.19804.5	chr2	+	5200	8	FSM	ENSMUSG00000027326.14	ENSMUST00000152380.8	1573	8	21	-3648	-7	0	multi-exon	FALSE	canonical	3	17	junction_1	17.907927784951	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATAATTGTGTCTTGTG	7232	False	NA	NA	False	ATTAAA	-18	NA	118877620	118903400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
ES.19804.6	chr2	+	5838	13	NNC	ENSMUSG00000027326.14	novel	6525	24	NA	NA	0	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	22.8234467647247	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGCCTTCGGTAT	7239	False	NA	2	True	AATATA	-35	NA	118877627	118935925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912115_118935410
ES.19804.7	chr2	+	7136	24	FSM	ENSMUSG00000027326.14	ENSMUST00000099542.9	6525	24	28	-639	0	639	multi-exon	FALSE	canonical	3	17	junction_1	14.4274470622304	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCTTTCCTCTTTTTG	7239	False	NA	77	True	AATACA	-43	NA	118877627	118935241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.8	chr2	+	7856	24	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.4930068406591	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTCATTTCCTTATCT	7241	False	NA	19	True	AATATA	-28	NA	118877629	118935942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908360_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ES.19804.9	chr2	+	6213	15	NNC	ENSMUSG00000027326.14	novel	7800	23	NA	NA	-1	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	21.4296428303585	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCTTTATAATTAGTAT	7241	False	NA	NA	False	ATTAAA	-17	NA	118877629	118936962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118877708_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118917966_118936165
ES.19805.1	chr2	-	180	1	Intergenic	novelGene_16427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	118885212	118885032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118885000_118885200
ES.19806.1	chr2	-	170	1	Intergenic	novelGene_16428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATATAACA	NA	False	NA	NA	False	NA	NA	NA	118886612	118886442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118886400_118886600
ES.19807.1	chr2	-	176	1	Intergenic	novelGene_16430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTACTCAGAATT	NA	False	NA	NA	False	NA	NA	NA	118930610	118930434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118930400_118930600
ES.19808.1	chr2	-	3023	2	Antisense	novelGene_ENSMUSG00000027326.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAATTAAAAACAGATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	118936727	118932965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_118935406_118936144
ES.19809.1	chr2	+	2339	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-189	1218	-175	864	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGGAAGAAAGCTCAAAA	NA	False	NA	9	True	ATTAAA	-16	NA	118943098	118966553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.10	chr2	+	1917	9	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	4	710	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	247.800543532495	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATCTTTCCTGTGGTC	NA	False	NA	23	True	NA	NA	NA	118943277	118966399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.11	chr2	+	1632	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	8	1728	1	354	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTATATGCCTGAACTG	NA	False	NA	NA	False	NA	NA	NA	118943295	118966043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.12	chr2	+	4435	8	NIC	ENSMUSG00000027323.11	novel	2975	9	NA	NA	-1	519	intron_retention	FALSE	canonical	3	651	junction_5	93.2628499654255	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTTATTTGCTGGAGA	NA	False	NA	21	True	AATAAA	-17	NA	118943296	118966208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118964990_118965529
ES.19809.14	chr2	+	1419	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	11	1938	1	144	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTAGAGTCTATTAATA	NA	False	NA	10	True	NA	NA	NA	118943298	118965833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.15	chr2	+	2855	8	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	11	1225	1	857	intron_retention	FALSE	canonical	3	651	junction_5	92.0239542905286	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGATTTGGAAGAAAG	NA	False	NA	2	True	ATTAAA	-9	NA	118943298	118966546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554
ES.19809.16	chr2	+	5325	10	NNC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	1	862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	249.496826967131	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTGGAAGAAAGCTCAA	NA	False	NA	7	True	ATTAAA	-14	NA	118943298	118966551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118946704_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.17	chr2	+	1659	9	FSM	ENSMUSG00000027323.11	ENSMUST00000152327.8	2975	9	2	1314	2	515	multi-exon	FALSE	canonical	2	25	junction_7	266.546870878275	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGTGTTATTTGCTG	NA	False	NA	17	True	AATAAA	-13	NA	118943299	118966204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964867_118964990_118965529
ES.19809.18	chr2	+	1842	9	FSM	ENSMUSG00000027323.11	ENSMUST00000152327.8	2975	9	19	1114	19	715	multi-exon	FALSE	canonical	2	25	junction_7	266.546870878275	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCCTGTGGTCTTTGT	NA	False	NA	28	True	NA	NA	NA	118943316	118966404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964867_118964990_118965529
ES.19809.19	chr2	+	4950	7	FSM	ENSMUSG00000027323.11	ENSMUST00000110828.2	2849	7	22	-2123	19	514	multi-exon	FALSE	canonical	3	651	junction_5	99.374152686814	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGATGTGTTATTTGCT	NA	False	NA	16	True	AATAAA	-12	NA	118943316	118966203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984
ES.19809.2	chr2	+	3557	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-189	0	-175	0	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAAGTCCTATGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	118943098	118967771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.20	chr2	+	1968	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	33	1367	23	715	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCCTGTGGTCTTTGT	NA	False	NA	28	True	NA	NA	NA	118943320	118966404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.21	chr2	+	4606	8	NIC	ENSMUSG00000027323.11	novel	2975	9	NA	NA	23	714	intron_retention	FALSE	canonical	3	651	junction_5	93.2628499654255	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTCCTGTGGTCTTTG	NA	False	NA	27	True	NA	NA	NA	118943320	118966403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118964990_118965529
ES.19809.22	chr2	+	6371	9	FSM	ENSMUSG00000027323.11	ENSMUST00000152327.8	2975	9	24	-3420	24	3167	multi-exon	FALSE	canonical	2	25	junction_7	266.546870878275	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTCTCTCTTCTTAG	NA	False	NA	3	True	AATAAA	-19	NA	118943321	118970938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964867_118964990_118965529
ES.19809.23	chr2	+	6502	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	39	-3173	29	3173	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTCTTAGACTCAT	NA	False	NA	9	True	AATAAA	-25	NA	118943326	118970944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.24	chr2	+	2012	9	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	32	857	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	247.800543532495	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGATTTGGAAGAAAG	NA	False	NA	2	True	ATTAAA	-9	NA	118943329	118966546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.25	chr2	+	2142	9	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	32	715	intron_retention	FALSE	canonical	3	651	junction_5	87.2396125621842	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCCTGTGGTCTTTGT	NA	False	NA	28	True	NA	NA	NA	118943329	118966404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964990_118965529
ES.19809.26	chr2	+	1660	10	NNC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	33	515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	256.74024919275	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGTGTTATTTGCTG	NA	False	NA	17	True	AATAAA	-13	NA	118943330	118966204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965627
ES.19809.27	chr2	+	2514	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	45	809	35	-556	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCTGGGTATGCTGGG	NA	False	NA	NA	False	NA	NA	NA	118943332	118966962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.28	chr2	+	2488	9	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	48	1372	38	710	intron_retention	FALSE	canonical	3	651	junction_5	92.8385695710571	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATCTTTCCTGTGGTC	NA	False	NA	23	True	NA	NA	NA	118943335	118966399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867
ES.19809.29	chr2	+	2671	8	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	48	1372	38	710	intron_retention	FALSE	canonical	3	651	junction_5	92.0239542905286	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATCTTTCCTGTGGTC	NA	False	NA	23	True	NA	NA	NA	118943335	118966399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554
ES.19809.31	chr2	+	1915	10	NNC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	51	703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	260.498856659655	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTACTGTATCTTTCC	NA	False	NA	16	True	NA	NA	NA	118943348	118966392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964880_118964990_118965529
ES.19809.33	chr2	+	1478	8	NIC	ENSMUSG00000027323.11	novel	2975	9	NA	NA	61	515	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	288.142538423225	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGTGTTATTTGCTG	NA	False	NA	17	True	AATAAA	-13	NA	118943358	118966204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118965529
ES.19809.34	chr2	+	1909	9	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	63	513	intron_retention	FALSE	canonical	3	651	junction_5	87.2396125621842	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGATGTGTTATTTGC	NA	False	NA	15	True	AATAAA	-11	NA	118943360	118966202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964990_118965529
ES.19809.35	chr2	+	175	1	Intergenic	novelGene_16432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACTGCTAATGGGG	NA	False	NA	NA	False	NA	NA	NA	118947162	118947337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118947200_118947300
ES.19809.36	chr2	+	176	1	Intergenic	novelGene_16433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGTTCACC	NA	False	NA	NA	False	NA	NA	NA	118958521	118958697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118958500_118958700
ES.19809.37	chr2	+	3152	4	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	16590	1563	-2121	519	3prime_fragment	FALSE	canonical	3	676	junction_2	62.7587975240656	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTTATTTGCTGGAGA	NA	False	NA	21	True	AATAAA	-17	NA	118959877	118966208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.38	chr2	+	3254	2	ISM	ENSMUSG00000027323.11	ENSMUST00000152327.8	2975	9	19455	972	754	857	3prime_fragment	FALSE	canonical	3	824	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGATTTGGAAGAAAG	NA	False	NA	2	True	ATTAAA	-9	NA	118962752	118966546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_118964990_118965529
ES.19809.4	chr2	+	1981	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	-175	1562	-161	520	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTATTTGCTGGAGAT	NA	False	NA	22	True	AATAAA	-18	NA	118943112	118966209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.5	chr2	+	1700	10	NNC	ENSMUSG00000027323.11	novel	738	6	NA	NA	-157	514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	249.496826967131	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGATGTGTTATTTGCT	NA	False	NA	16	True	AATAAA	-12	NA	118943116	118966203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118943245_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ES.19809.7	chr2	+	1913	8	NIC	ENSMUSG00000027323.11	novel	2975	9	NA	NA	-151	714	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	288.142538423225	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTCCTGTGGTCTTTG	NA	False	NA	27	True	NA	NA	NA	118943122	118966403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118965529
ES.19809.8	chr2	+	9882	7	FSM	ENSMUSG00000027323.11	ENSMUST00000110828.2	2849	7	-172	-6861	-151	3170	multi-exon	FALSE	canonical	3	651	junction_5	99.374152686814	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCTCTTCTTAGACT	NA	False	NA	6	True	AATAAA	-22	NA	118943122	118970941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984
ES.19809.9	chr2	+	4857	8	NNC	ENSMUSG00000027323.11	novel	2849	7	NA	NA	-151	3162	intron_retention	FALSE	non_canonical	0	0	junction_7	288.142538423225	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAAAGAATTCTCTCTT	NA	False	NA	-2	True	AATAAA	-14	NA	118943122	118970933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118964391_118969407
ES.1981.1	chr1	+	2571	9	NNC	ENSMUSG00000102483.3	novel	3435	22	NA	NA	20017	-18718	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177656013	177771526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_177656148_177656245_177656311_177677795_177677874_177687403_177687897_177699397_177699879_177735290_177735344_177764166_177764218_177765212_177765323_177770420
ES.19810.1	chr2	-	475	1	Intergenic	novelGene_16431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAAATAACTCACTCTCT	NA	False	NA	NA	False	CATAAA	-16	NA	118943218	118942743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118942700_118943200
ES.19811.1	chr2	-	4512	2	Antisense	novelGene_ENSMUSG00000027323.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATGGAGGTCCATG	NA	False	NA	NA	False	NA	NA	NA	118952027	118945401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_118949314_118951427
ES.19812.1	chr2	-	158	1	Intergenic	novelGene_16434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	118959810	118959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_118959700_118959800
ES.19813.1	chr2	-	2216	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	35	-2	-35	2	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGACTGTTTCTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	118987480	118967479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19813.11	chr2	-	4363	12	NNC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	2	-4	intron_retention	FALSE	canonical	1	1	junction_11	78.172409581864	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATATGTTTTGACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	118987443	118967485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118986931_118987387
ES.19813.12	chr2	-	3253	12	NNC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_6	78.4507004219479	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATATGTTTTGACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	118987440	118967485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118972380_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838
ES.19813.13	chr2	-	2218	13	NNC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	78.6021981598197	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATATGTTTTGACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	118987459	118967485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987062_118987387
ES.19813.14	chr2	-	3105	11	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	0	-7	intron_retention	FALSE	canonical	3	217	junction_8	27.3759018116299	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGGATATGTTTTGACT	NA	False	NA	NA	False	AATAAA	-12	NA	118987429	118967488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838
ES.19813.15	chr2	-	923	2	FSM	ENSMUSG00000070730.12	ENSMUST00000130249.2	423	2	-144	-356	-144	356	multi-exon	FALSE	canonical	3	276	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118978070	118976279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_118976922_118977789
ES.19813.2	chr2	-	2095	12	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	76.619484823023	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	118987436	118967480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19813.3	chr2	-	5810	9	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	5	1	intron_retention	FALSE	canonical	3	215	junction_8	25.0246753225691	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	118987440	118967480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118969574_118969832_118969932_118970524_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19813.4	chr2	-	5060	11	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	5	1	intron_retention	FALSE	canonical	3	215	junction_10	24.4787663087828	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGACTGTTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	118987440	118967480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118970603_118970740_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19813.6	chr2	-	2210	13	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	51	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	78.6021981598197	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGTTTTGACTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	118987254	118967483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987163
ES.19813.7	chr2	-	5215	10	NIC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	215	junction_9	26.3555930297654	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGTTTTGACTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	118987459	118967483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_118968909_118969519_118969574_118969832_118969932_118970524_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19813.8	chr2	-	5767	10	NNC	ENSMUSG00000070730.12	novel	2249	13	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_5	82.56325670675	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATATGTTTTGACTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	118987443	118967485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_118969574_118969832_118969932_118970524_118970603_118970740_118973170_118976818_118976922_118977692_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ES.19814.1	chr2	+	2493	1	Intergenic	novelGene_16435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAGAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118987534	118990027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118987500_118990000
ES.19815.1	chr2	+	260	1	Intergenic	novelGene_16436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAAATGAACAAAA	NA	False	NA	NA	False	AATACA	-42	NA	118991220	118991480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_118991200_118991500
ES.19816.1	chr2	+	593	3	FSM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	33	19	33	-19	multi-exon	FALSE	canonical	3	13	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGTGGTTGTTCCTCAG	1241	False	NA	1	True	AATAAA	-8	NA	118998286	119002852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_118998355_119000156_119000252_119002422
ES.19817.1	chr2	+	170	2	Intergenic	novelGene_16437	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4284	False	NA	NA	False	NA	NA	NA	119012424	119023339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119012458_119023202
ES.19817.2	chr2	+	170	1	Intergenic	novelGene_16439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119023169	119023339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119023200_119023300
ES.19818.1	chr2	+	2156	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.5883389077618	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCAGATGTTTTTTCTG	4280	False	NA	6	True	NA	NA	NA	119039106	119047528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119039460_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042110_119042496_119045243_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.2	chr2	+	1654	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	37.4861307685923	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	276	False	NA	7	True	NA	NA	NA	119039479	119047529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046900_119047023_119047109
ES.19818.3	chr2	+	1639	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	370	-1	-8	1	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	281	False	NA	9	True	NA	NA	NA	119039484	119047531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.4	chr2	+	2324	10	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	3	junction_5	37.527603009709	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCCAGATGTTTTTTCT	281	False	NA	5	True	NA	NA	NA	119039484	119047527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042110_119042496_119045314_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.5	chr2	+	1903	11	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.2821673189744	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	291	False	NA	7	True	NA	NA	NA	119039494	119047529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042110_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.6	chr2	+	2040	10	NIC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	2	-1	intron_retention	FALSE	canonical	1	23	junction_1	26.3598085382432	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	291	False	NA	7	True	NA	NA	NA	119039494	119047529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.7	chr2	+	1617	11	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.9295399392083	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGTTTTTTCTGT	292	False	NA	7	True	NA	NA	NA	119039495	119047529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042395_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ES.19818.8	chr2	+	1487	10	NNC	ENSMUSG00000068580.12	novel	2008	11	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.5832517937902	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	329	False	NA	9	True	NA	NA	NA	119039532	119047531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119039665_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046894_119047023_119047109
ES.19819.1	chr2	-	175	2	Antisense	novelGene_ENSMUSG00000055926.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	119015321	118988766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_118988893_119015272
ES.19819.10	chr2	-	1888	2	Genic_Genomic	ENSMUSG00000034278.4	novel	1008	11	NA	NA	2	-23000	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	119039274	119037345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_119037830_119037870
ES.19819.2	chr2	-	5572	11	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	134.443631310672	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039256	119002980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119003167_119005391_119009944_119010365_119010447_119010967_119011046_119011406_119011447_119014073_119014287_119014366_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.3	chr2	-	3453	11	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	-15	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	103.574369416376	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTACTTTTCTTCCTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	119039291	119002981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119012408_119012605_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.4	chr2	-	3531	11	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	7	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	118.994327595898	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTACTTTTCTTCCTC	NA	False	NA	-7	True	AATAAA	-12	NA	119039256	119002983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011162_119011406_119012407_119012605_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.5	chr2	-	1004	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	4	0	-4	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCTACTTTTCTTCCT	NA	False	NA	-8	True	AATAAA	-11	NA	119039276	119002984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.6	chr2	-	1056	11	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	-53	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	103.574369416376	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTCTACTTTTCTT	NA	False	NA	-11	True	AATAAA	-8	NA	119039329	119002987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011447_119014073_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.7	chr2	-	3567	10	NNC	ENSMUSG00000034278.4	novel	1008	11	NA	NA	73	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	106.163512366654	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTCTACTTTTCTT	NA	False	NA	-11	True	AATAAA	-8	NA	119039190	119002987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119012408_119012605_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ES.19819.9	chr2	-	178	1	Intergenic	novelGene_16438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	119015324	119015146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119015100_119015300
ES.1982.1	chr1	+	174	1	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAATTACATGCAAG	NA	False	NA	NA	False	NA	NA	NA	177790621	177790795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_177790600_177790800
ES.19820.2	chr2	-	799	5	NNC	ENSMUSG00000027317.9	novel	790	5	NA	NA	-334	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	15.337861650178	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGGGAGTGTGGTGTGT	NA	False	NA	NA	False	GATAAA	-16	NA	119060721	119048601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022_119060323_119060642
ES.19820.3	chr2	-	1049	5	FSM	ENSMUSG00000027317.9	ENSMUST00000110820.3	790	5	-242	-17	-201	-4	multi-exon	FALSE	canonical	2	2	junction_4	21.0297408448131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAAGGGAGTGTGGTGT	NA	False	NA	NA	False	GATAAA	-14	NA	119060588	119048603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119058237_119058303_119060022
ES.19820.4	chr2	-	2927	1	Intergenic	novelGene_16440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACATGACAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	119053862	119050935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119050900_119053900
ES.19821.1	chr2	+	2269	11	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	-1798	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	93.7731838000609	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCCCACCCCCACCC	NA	False	NA	28	True	AATAAA	-16	NA	119066044	119080010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119066137_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.10	chr2	+	2268	10	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	103.024029319785	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067846	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076407_119076831_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.11	chr2	+	2334	7	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	14	-8	intron_retention	FALSE	canonical	0	0	junction_4	133.618549111516	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067856	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067954_119068181_119068725_119075635_119076389_119076540_119076568_119076852_119076966_119077077_119077129_119079237
ES.19821.12	chr2	+	2277	10	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	24	-8	intron_retention	FALSE	canonical	3	5	junction_8	103.360211558091	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067866	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076568_119076839_119076966_119077077_119077129_119078491_119078547_119078836_119078885_119079237
ES.19821.13	chr2	+	2461	9	NIC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	28	-8	intron_retention	FALSE	canonical	1	3	junction_8	104.139029667075	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067870	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076966_119077077_119077129_119078491_119078663_119079237
ES.19821.14	chr2	+	2737	5	NIC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	48	-8	intron_retention	FALSE	canonical	1	1	junction_4	126.248762370171	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067890	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119067954_119068181_119068725_119075635_119076966_119077077_119077129_119079237
ES.19821.15	chr2	+	2506	9	NIC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	-41	-8	intron_retention	FALSE	canonical	3	163	junction_1	51.6786948364604	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067916	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119067954_119068181_119068725_119075635_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.16	chr2	+	2236	10	NNC	ENSMUSG00000027315.14	novel	1913	11	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.163597189711	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067940	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076817_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.17	chr2	+	2912	4	NIC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	-14	-8	intron_retention	FALSE	canonical	1	1	junction_3	144.259026291829	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067943	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119068725_119075635_119076966_119077077_119077129_119079237
ES.19821.18	chr2	+	2400	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	-90	13	-14	0	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067943	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.19	chr2	+	4789	5	NIC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	281	junction_3	10.770329614269	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067943	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119068725_119075635_119076130_119076217_119076389_119076540_119076966_119077077
ES.19821.2	chr2	+	2288	11	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	-319	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	91.9994021719707	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCCTCCCACCCCCACC	NA	False	NA	27	True	AATAAA	-15	NA	119067523	119080009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067636_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.20	chr2	+	4085	7	NIC	ENSMUSG00000027315.14	novel	1913	11	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	41	junction_1	102.01633856071	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067948	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119068028_119068181_119068725_119075635_119076389_119076540_119076568_119076839_119076966_119077077_119078885_119079237
ES.19821.21	chr2	+	2702	8	NIC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	281	junction_2	18.0215290750835	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067948	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119068725_119075635_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.22	chr2	+	2053	10	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	133	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	97.1407277492521	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119068166	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078547_119078836_119078885_119079237
ES.19821.23	chr2	+	2293	10	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	138	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	97.0429458195357	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119068171	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076710_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.24	chr2	+	2180	10	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	145	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	98.0555398174366	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119068178	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077054_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.25	chr2	+	2175	10	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	180	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.3532450460058	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119068213	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076786_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.26	chr2	+	2083	9	NNC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	216	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	103.202168097381	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119068249	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076397_119076823_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.28	chr2	+	4347	5	ISM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	237	13	237	0	intron_retention	FALSE	canonical	3	281	junction_4	10.1980390271856	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119068270	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540
ES.19821.3	chr2	+	2562	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-289	0	-289	0	multi-exon	FALSE	canonical	3	163	junction_1	46.3102580429002	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067553	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.4	chr2	+	3484	4	NIC	ENSMUSG00000027315.14	novel	2323	10	NA	NA	-188	-8	intron_retention	FALSE	canonical	1	3	junction_3	148.674140320366	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067654	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119068725_119075635_119077129_119078491_119078663_119079237
ES.19821.5	chr2	+	5019	3	ISM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	-5	0	-5	0	intron_retention	FALSE	canonical	3	163	junction_1	73	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067837	119079995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119067954_119068181_119068725_119075635
ES.19821.6	chr2	+	2151	11	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	98.2046842059991	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067840	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078547_119078836_119078885_119079237
ES.19821.7	chr2	+	2263	10	NNC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	103.024029319785	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTGTTGTGTTTGTTG	NA	False	NA	8	True	ATTAAA	-8	NA	119067842	119079990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076817_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.8	chr2	+	2342	11	FSM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	-115	-314	0	-5	multi-exon	FALSE	canonical	3	41	junction_1	81.6752104374393	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTGTTGTGTTTGTTG	NA	False	NA	8	True	ATTAAA	-8	NA	119067842	119079990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ES.19821.9	chr2	+	3116	6	NIC	ENSMUSG00000027315.14	novel	2273	11	NA	NA	0	-8	intron_retention	FALSE	canonical	3	163	junction_1	62.7515736854463	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTGTTGTGTTTG	NA	False	NA	5	True	ATTAAA	-5	NA	119067842	119079987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119067954_119068181_119068725_119075635_119077129_119078491_119078663_119078836_119078885_119079237
ES.19822.1	chr2	-	2369	1	Antisense	novelGene_ENSMUSG00000027315.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTGTGGTGATAC	NA	False	NA	NA	False	NA	NA	NA	119068140	119065771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119065800_119068100
ES.19823.1	chr2	-	3527	1	Intergenic	novelGene_16441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAGTCAAGAGGAAC	NA	False	NA	NA	False	NA	NA	NA	119074620	119071093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119071100_119074600
ES.19824.1	chr2	-	1757	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6739	5	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	7.54247233265651	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGTCTCCTGGAGT	4266	False	NA	0	True	AATAAA	-22	NA	119108492	119099676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119108411
ES.19824.2	chr2	-	7354	2	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-5514	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	5491	False	NA	-5	True	AATAAA	-17	NA	119107267	119099681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119102768_119102999
ES.19824.3	chr2	-	8340	3	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6696	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	22.5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGTCTGTGGTCTC	4309	False	NA	-7	True	AATAAA	-15	NA	119108449	119099683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119100969_119101162_119102768_119102999
ES.19824.4	chr2	-	1879	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-5739	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2132034355964	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGTCTGTGGTCTC	5266	False	NA	-7	True	AATAAA	-15	NA	119107492	119099683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119101036_119101162_119101222_119101396_119101715_119107342
ES.19824.5	chr2	-	1818	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-5738	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	19.7989898732233	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGTCTGTGGTCTC	5267	False	NA	-7	True	AATAAA	-15	NA	119107491	119099683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119107342
ES.19825.1	chr2	+	159	1	Intergenic	novelGene_16442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	119111550	119111709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119111600_119111700
ES.19826.1	chr2	-	174	1	Intergenic	novelGene_16443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATATACGCTTT	NA	False	NA	NA	False	NA	NA	NA	119116086	119115912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119115900_119116100
ES.19827.1	chr2	+	3968	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	-11	97	-9	30	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCCTGCAAGCCTTTGA	6366	False	NA	NA	False	AAAAAG	-10	NA	119119211	119128837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ES.19827.2	chr2	+	4839	4	NIC	ENSMUSG00000034216.13	novel	4054	5	NA	NA	1	928	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	33.0286071291069	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCTGTGTCAGAATT	6378	False	NA	NA	False	TATAAA	-21	NA	119119223	119129862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119119612_119123178_119123271_119123399_119125271_119127374
ES.19827.3	chr2	+	3757	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	2	295	2	-168	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGTGTTGATGCTGA	6379	False	NA	18	True	ATTAAA	-30	NA	119119224	119128639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ES.19827.4	chr2	+	3475	1	NIC	ENSMUSG00000034216.13	novel	3194	4	NA	NA	10	-3261	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGCATAGTAATAATAAA	6387	False	NA	NA	False	AAGAAA	-13	NA	119119232	119122707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119119200_119122700
ES.19827.5	chr2	+	3692	6	NNC	ENSMUSG00000034216.13	novel	4054	5	NA	NA	10	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.5066094290754	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGTCCTGCAAGCCT	6387	False	NA	NA	False	AAAAAG	-6	NA	119119232	119128833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119124445_119124695_119125271_119127374
ES.19827.6	chr2	+	4974	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	13	-933	13	933	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTCAGAATTGTCTC	6390	False	NA	NA	False	TATAAA	-26	NA	119119235	119129867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ES.19827.7	chr2	+	2096	2	ISM	ENSMUSG00000034216.13	ENSMUST00000139367.8	3194	4	16	3614	14	-3614	5prime_fragment	FALSE	canonical	3	66	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGAGAGAGTGCTCA	6391	False	NA	NA	False	NA	NA	NA	119119236	119122354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119119612_119120633
ES.19827.8	chr2	+	5683	3	NIC	ENSMUSG00000034216.13	novel	4054	5	NA	NA	-20	-181	intron_retention	FALSE	canonical	2	4	junction_1	30	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGACTTGATGGCTTT	6402	False	NA	5	True	ATTAAA	-17	NA	119119247	119128626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119119612_119123178_119123271_119123399
ES.19828.1	chr2	-	209	1	Intergenic	novelGene_16444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTGAACCATTATTTC	NA	False	NA	NA	False	NA	NA	NA	119126232	119126023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119126000_119126200
ES.19829.1	chr2	+	2038	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	-396	-5	-396	5	multi-exon	FALSE	canonical	3	568	junction_2	33	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGAAAGCCTCTTTTC	6756	False	NA	86	True	GATAAA	-18	NA	119181313	119184867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119182118_119182837_119182874_119183669
ES.19829.2	chr2	+	2235	2	NIC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	63	-59	intron_retention	FALSE	canonical	3	568	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGGTTTGTCTCTGT	7215	False	NA	22	True	CATAAA	-22	NA	119181772	119184803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119182874_119183669
ES.19829.3	chr2	+	2299	2	ISM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	66	68	66	-68	intron_retention	FALSE	canonical	3	634	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTGCCAGAATATGGTT	7218	False	NA	13	True	CATAAA	-13	NA	119181775	119184794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119182118_119182837
ES.1983.1	chr1	+	2790	1	NIC	ENSMUSG00000091476.9	novel	3033	20	NA	NA	23	-62056	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTTCTGTGGTGGTTA	NA	False	NA	NA	False	CATAAA	-21	NA	177811011	177813801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_177811000_177813800
ES.19830.1	chr2	+	178	1	Intergenic	novelGene_16445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGATGACACAAC	NA	False	NA	NA	False	NA	NA	NA	119224990	119225168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119225000_119225200
ES.19831.1	chr2	+	160	1	Intergenic	novelGene_16446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119234667	119234827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119234700_119234800
ES.19832.1	chr2	+	174	1	Intergenic	novelGene_16447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAGTTATCAGA	1809	False	NA	NA	False	NA	NA	NA	119239541	119239715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119239500_119239700
ES.19833.1	chr2	+	1406	1	Intergenic	novelGene_16448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAACTGGAGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	119250879	119252285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119250900_119252300
ES.19834.1	chr2	+	158	1	Intergenic	novelGene_16449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	119264146	119264304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119264100_119264300
ES.19835.1	chr2	+	411	1	Intergenic	novelGene_16450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119266717	119267128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119266700_119267100
ES.19836.1	chr2	-	7486	26	NIC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	-5832	0	intron_retention	FALSE	canonical	3	27	junction_20	10.3835254128836	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	2016	False	NA	0	True	AATAAA	-26	NA	119275993	119203522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941
ES.19836.11	chr2	-	3397	14	NNC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	15901	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.4317307466053	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAAAGTGTCTGTGGTC	NA	False	NA	-3	True	AATAAA	-23	NA	119254260	119203525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119247949_119248089_119248801_119248943_119254085
ES.19836.13	chr2	-	6077	36	NNC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	206	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.5631348946298	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAAAGTGTCTGTGGTC	NA	False	NA	-3	True	AATAAA	-23	NA	119307888	119203525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284530_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
ES.19836.17	chr2	-	1665	1	Intergenic	novelGene_16451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGATTAAAGGTGTG	NA	False	NA	NA	False	AAAAAG	-9	NA	119295214	119293549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119293500_119295200
ES.19836.3	chr2	-	4720	1	NIC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	61919	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	542	False	NA	0	True	AATAAA	-26	NA	119208242	119203522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119203500_119208200
ES.19836.5	chr2	-	6314	36	FSM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	40	0	-34	0	multi-exon	FALSE	canonical	3	19	junction_35	12.9307732931632	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	NA	False	NA	0	True	AATAAA	-26	NA	119308128	119203522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
ES.19836.8	chr2	-	6083	35	NNC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	-18588	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	14.364508357268	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	NA	False	NA	0	True	AATAAA	-26	NA	119288749	119203522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237461_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561
ES.19837.1	chr2	-	1695	1	Intergenic	novelGene_16452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGCGTGGCAGCGCA	NA	False	NA	NA	False	AAGAAA	-30	NA	119311016	119309321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119309300_119311000
ES.19838.1	chr2	+	160	1	Intergenic	novelGene_16453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	119325154	119325314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119325200_119325300
ES.19839.1	chr2	-	174	1	Intergenic	novelGene_16454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAACCAATGG	NA	False	NA	NA	False	NA	NA	NA	119333658	119333484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119333500_119333700
ES.1984.10	chr1	-	2646	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-103	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	304.931720499306	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624180	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610447_177611614_177611684_177612461_177612565_177623777
ES.1984.11	chr1	-	2501	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	304.931720499306	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624028	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610454_177611614_177611684_177612461_177612565_177623777
ES.1984.12	chr1	-	6995	11	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	26	-1	intron_retention	FALSE	canonical	3	944	junction_7	59.8067721917844	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624041	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.15	chr1	-	2424	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	304.84203559658	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGTGTGTTGTTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	177624042	177590743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623873
ES.1984.17	chr1	-	5906	12	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	308.001717286186	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGTGTGTTGTTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	177624068	177590743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604134_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.18	chr1	-	3597	11	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	15	-2	intron_retention	FALSE	canonical	3	49	junction_8	318.605712440942	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGTGTGTTGTTTT	NA	False	NA	-5	True	ATTAAA	-20	NA	177624052	177590743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177611614_177611684_177612461_177612565_177623777
ES.1984.19	chr1	-	2599	14	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-190289	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	294.372504826169	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCTTTGTGTGTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	177814366	177590744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777_177623984_177814227
ES.1984.2	chr1	-	3684	12	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	15	0	intron_retention	FALSE	canonical	2	7	junction_10	317.201424652622	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624052	177590741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611718_177612461_177612565_177623777
ES.1984.20	chr1	-	3616	12	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	39	-4	intron_retention	FALSE	canonical	0	0	junction_9	317.572351358092	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGCTTTGTGTGTTGTT	NA	False	NA	-7	True	ATTAAA	-18	NA	177624028	177590745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610454_177611614_177611684_177612461_177612565_177623777
ES.1984.21	chr1	-	2404	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-8541	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	304.306817026646	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGCTTTGTGTGTTGTT	NA	False	NA	-7	True	ATTAAA	-18	NA	177632618	177590745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177632467
ES.1984.22	chr1	-	2294	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	305	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	304.84203559658	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGCTTTGTGTGTTGTT	NA	False	NA	-7	True	ATTAAA	-18	NA	177623762	177590745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623721
ES.1984.23	chr1	-	2474	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	304.610680486858	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGCTTTGTGTGTTGT	NA	False	NA	-8	True	ATTAAA	-17	NA	177624041	177590746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599751_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.24	chr1	-	2392	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	21	-7	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	312.217078540286	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGCTTTGTGTGTT	NA	False	NA	-10	True	ATTAAA	-15	NA	177624046	177590748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.25	chr1	-	3296	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	21	-348	intron_retention	FALSE	canonical	3	944	junction_8	79.6623037868483	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTTTCTTTGTTTTCA	NA	False	NA	4	True	ATTAAA	-26	NA	177624046	177591089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.26	chr1	-	2369	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	-167	569	-167	-355	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGATATTTTTCTTT	NA	False	NA	-3	True	ATTAAA	-19	NA	177624244	177591096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.27	chr1	-	3363	12	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	6	-356	intron_retention	FALSE	canonical	2	4	junction_7	317.181753042022	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATGGATATTTTTCTT	NA	False	NA	-4	True	ATTAAA	-18	NA	177624061	177591097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604191_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.28	chr1	-	2170	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	15	-356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	306.365919104735	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATGGATATTTTTCTT	NA	False	NA	-4	True	ATTAAA	-18	NA	177624052	177591097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598826_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.29	chr1	-	3549	5	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-6112	-358	intron_retention	FALSE	canonical	3	1001	junction_3	99.2833697051022	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGGATATTTTTC	NA	False	NA	-6	True	ATTAAA	-16	NA	177602279	177591099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140
ES.1984.3	chr1	-	4803	4	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-5660	0	intron_retention	FALSE	canonical	3	1001	junction_3	114.351310540029	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177601827	177590741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637
ES.1984.30	chr1	-	2110	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-8541	-358	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	404.355454190163	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGATGGATATTTTTC	NA	False	NA	-6	True	ATTAAA	-16	NA	177632618	177591099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604191_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177632467
ES.1984.31	chr1	-	2058	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	7	-431	combination_of_known_splicesites	FALSE	canonical	3	49	junction_9	304.563310195689	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGAGATGTTTCCC	NA	False	NA	-79	True	ATTAAA	-11	NA	177624060	177591172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177611614_177611684_177612461_177612565_177623777
ES.1984.32	chr1	-	2040	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	30	701	20	-487	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTAGTTCTCTCTGCA	NA	False	NA	NA	False	TATAAA	-5	NA	177624047	177591228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.33	chr1	-	4046	11	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	4	-963	intron_retention	FALSE	canonical	3	944	junction_7	83.5476510741026	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCGTTGGTTTGCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	177624063	177591704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.34	chr1	-	1728	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	-134	1177	-134	-963	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCGTTGGTTTGCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	177624211	177591704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.35	chr1	-	4565	11	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	9	-970	intron_retention	FALSE	canonical	3	944	junction_7	77.3940566193555	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCAGCTGGCGTTGGT	NA	False	NA	-13	True	AATAAA	-13	NA	177624058	177591711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.37	chr1	-	1362	3	Antisense	novelGene_ENSMUSG00000102483.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATAACCAAATCCCT	7279	False	NA	NA	False	NA	NA	NA	177756417	177736497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_177737565_177738116_177738247_177756252
ES.1984.38	chr1	-	176	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGGATCTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	177807818	177807642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_177807600_177807800
ES.1984.4	chr1	-	3109	12	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-185	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	414.783464369121	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624262	177590741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177598083_177598706_177598832_177599637_177599793_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.5	chr1	-	3809	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-135	-1	intron_retention	FALSE	canonical	3	944	junction_8	79.6623037868483	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624212	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ES.1984.7	chr1	-	2610	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	304.428004168838	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624097	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611718_177612461_177612565_177623777
ES.1984.8	chr1	-	2672	14	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	458.21685520126	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGTGTGTTGTTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	177624082	177590742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598005_177598083_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611718_177612461_177612565_177623777
ES.19840.1	chr2	-	2671	12	ISM	ENSMUSG00000048647.10	ENSMUST00000060009.9	6042	13	627	2868	194	-2862	3prime_fragment	FALSE	canonical	1	4	junction_8	3.37956914462566	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAACCTGA	NA	False	NA	NA	False	NA	NA	NA	119377481	119349853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_119351207_119354003_119354196_119355052_119355197_119359164_119359246_119359326_119359432_119360569_119360657_119363922_119363982_119369228_119369357_119369603_119369659_119370504_119370574_119371839_119372026_119377269
ES.19840.2	chr2	-	2093	7	NIC	ENSMUSG00000048647.10	novel	5290	11	NA	NA	2739	-2898	intron_retention	FALSE	canonical	3	6	junction_1	3.02305952453618	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGACTGACCTAGAGGTG	NA	False	NA	NA	False	AGTAAA	-17	NA	119369255	119349889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119351207_119354003_119354196_119355052_119355197_119359164_119359432_119360569_119360657_119363922_119363982_119369228
ES.19840.3	chr2	-	2533	12	NNC	ENSMUSG00000048647.10	novel	6042	13	NA	NA	215	-2900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.48136637958772	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGACTGACCTAGAGG	NA	False	NA	NA	False	AGTAAA	-15	NA	119377460	119349891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119351207_119354087_119354196_119355052_119355197_119359164_119359246_119359326_119359432_119360569_119360657_119363922_119363982_119369228_119369362_119369603_119369659_119370504_119370574_119371839_119372026_119377269
ES.19840.4	chr2	-	177	1	Intergenic	novelGene_16455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATCAGTGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	119356016	119355839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119355800_119356000
ES.19840.5	chr2	-	312	1	Intergenic	novelGene_16456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAACACA	NA	False	NA	NA	False	NA	NA	NA	119366665	119366353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119366400_119366700
ES.19841.1	chr2	+	3223	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	-617	3	-617	-3	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGGTTGAGTTTTACC	NA	False	NA	NA	False	AATAAA	-22	NA	119377560	119417505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ES.19841.2	chr2	+	2515	6	NIC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	75.1654175801612	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAAGAACTTGGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	119378178	119417496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119378399_119391211_119391285_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ES.19841.3	chr2	+	2448	6	NNC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.0663706329272	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGGTTGAGTTTTACC	NA	False	NA	NA	False	AATAAA	-22	NA	119378205	119417505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119378399_119391211_119391285_119397130_119397216_119411181_119411238_119415010_119415134_119415587
ES.19841.5	chr2	+	2677	8	NNC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.5758772899452	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAAGAACTTGGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	119378207	119417496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415315_119415426_119415587
ES.19841.6	chr2	+	2674	8	NNC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	82.6020704390412	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAAGAACTTGGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	119378252	119417496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119378399_119378705_119378858_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ES.19841.7	chr2	+	154	1	Intergenic	novelGene_16457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAACTAAATAA	NA	False	NA	NA	False	NA	NA	NA	119387363	119387517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119387400_119387500
ES.19841.8	chr2	+	4225	1	NIC	ENSMUSG00000014077.14	novel	2609	7	NA	NA	16189	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAACTTGGTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	119413274	119417499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119413300_119417500
ES.19842.1	chr2	+	2752	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	-16	-1355	-16	1355	multi-exon	FALSE	canonical	3	71	junction_2	178.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGTGGACAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	119424761	119432582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19842.10	chr2	+	4450	4	NNC	ENSMUSG00000085438.2	novel	1381	3	NA	NA	8	3145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	201.761134898562	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGCTACTGTTTCAAA	NA	False	NA	NA	False	AATATA	-17	NA	119424791	119434372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424916_119426739_119426824_119428119_119428178_119430188
ES.19842.11	chr2	+	3740	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	8	4552	8	2204	multi-exon	FALSE	canonical	3	345	junction_2	41.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTACCTCTAAAAGCTGC	NA	False	NA	6	True	AATAAA	-45	NA	119424791	119433431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.12	chr2	+	3177	2	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	8	-3217	intron_retention	FALSE	canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119424791	119428010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424832_119424873
ES.19842.13	chr2	+	8232	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	8	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.32194209597	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAACTTGATTGTGTGT	NA	False	NA	12	True	AATAAA	-18	NA	119424791	119437971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424823_119424870_119424916_119426739_119426993_119430068
ES.19842.14	chr2	+	3259	1	NIC	ENSMUSG00000085438.2	novel	1381	3	NA	NA	13	-3172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAAGACAGTAAGCCATA	NA	False	NA	NA	False	NA	NA	NA	119424796	119428055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119424800_119428100
ES.19842.15	chr2	+	1017	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	18	7265	18	-509	multi-exon	FALSE	canonical	3	345	junction_2	41.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCTTAAATGTTCTGC	NA	False	NA	NA	False	AAGAAA	-33	NA	119424801	119430718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.16	chr2	+	1349	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	26	6	20	-6	multi-exon	FALSE	canonical	3	71	junction_2	178.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAATGGGTACTTGGACA	NA	False	NA	NA	False	TATAAA	-23	NA	119424803	119431221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19842.17	chr2	+	1244	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	26	111	20	-111	multi-exon	FALSE	canonical	3	71	junction_2	178.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAGCAAAGCTG	NA	False	NA	NA	False	TATAAA	-12	NA	119424803	119431116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19842.18	chr2	+	766	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	27	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.32194209597	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATGTTATCTAAATT	NA	False	NA	3	True	AATATA	-11	NA	119424810	119430518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424832_119424873_119424916_119426739_119426993_119430068
ES.19842.19	chr2	+	2152	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	27	677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.32194209597	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAATAAAATACTAG	NA	False	NA	-9	True	TATAAA	-19	NA	119424810	119431904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424832_119424873_119424916_119426739_119426993_119430068
ES.19842.2	chr2	+	918	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	-1	7383	-1	-627	multi-exon	FALSE	canonical	3	345	junction_2	41.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTTGTATGGGAGTG	NA	False	NA	85	True	GATAAA	-14	NA	119424782	119430600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.20	chr2	+	2049	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	33	-701	27	701	multi-exon	FALSE	canonical	3	71	junction_2	178.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGTTTAAGGTAACC	NA	False	NA	15	True	AATAAA	-12	NA	119424810	119431928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19842.21	chr2	+	650	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	27	-825	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.32194209597	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACCAAGTGTGGGT	NA	False	NA	NA	False	TTTAAA	-21	NA	119424810	119430402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424832_119424873_119424916_119426739_119426993_119430068
ES.19842.22	chr2	+	2417	2	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	27	-3176	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTAAGACAGTAAGC	NA	False	NA	NA	False	NA	NA	NA	119424810	119428051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424916_119425739
ES.19842.23	chr2	+	1513	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	27	6760	27	-4	multi-exon	FALSE	canonical	3	345	junction_2	41.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTACTTGGACAGA	NA	False	NA	NA	False	TATAAA	-25	NA	119424810	119431223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.24	chr2	+	2378	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	27	5895	27	861	multi-exon	FALSE	canonical	3	345	junction_2	41.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCAGCCACTTATATTT	NA	False	NA	NA	False	NA	NA	NA	119424810	119432088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.25	chr2	+	7026	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	27	1247	27	-1247	multi-exon	FALSE	canonical	3	345	junction_2	41.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTCCAATTTACCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	119424810	119436736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.26	chr2	+	8421	4	NNC	ENSMUSG00000085438.2	novel	8300	3	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	161.691750631324	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGATTGTGTGTTGTT	NA	False	NA	16	True	AATAAA	-22	NA	119424812	119437975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119424916_119425739_119425898_119426739_119426993_119430068
ES.19842.27	chr2	+	1720	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	33	6547	33	209	multi-exon	FALSE	canonical	3	345	junction_2	41.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAAGTGTGGATCTAGT	NA	False	NA	NA	False	AAGAAA	-43	NA	119424816	119431436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.28	chr2	+	2240	2	Genic_Genomic	ENSMUSG00000085438.2	novel	1381	3	NA	NA	960	-3176	multi-exon	FALSE	canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTAAGACAGTAAGC	NA	False	NA	NA	False	NA	NA	NA	119425743	119428051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_119426633_119426700
ES.19842.29	chr2	+	3442	1	ISM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	8285	1473	8285	-1473	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGTTTGTTATAATA	NA	False	NA	NA	False	GATAAA	-3	NA	119433068	119436510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119433100_119436500
ES.19842.3	chr2	+	1434	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	-1	6867	-1	-111	multi-exon	FALSE	canonical	3	345	junction_2	41.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAGCAAAGCTG	NA	False	NA	NA	False	TATAAA	-12	NA	119424782	119431116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.4	chr2	+	1445	2	ISM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	5	3176	-1	-3176	5prime_fragment	FALSE	canonical	3	428	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTAAGACAGTAAGC	NA	False	NA	NA	False	NA	NA	NA	119424782	119428051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119424916_119426739
ES.19842.5	chr2	+	2265	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	1	6034	1	722	multi-exon	FALSE	canonical	3	345	junction_2	41.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCTGGGCTTGGTTGC	NA	False	NA	36	True	AATAAA	-33	NA	119424784	119431949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.6	chr2	+	8129	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	8	-6756	2	0	multi-exon	FALSE	canonical	3	71	junction_2	178.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTTGCTTTTAA	NA	False	NA	24	True	AATAAA	-30	NA	119424785	119437983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19842.7	chr2	+	8298	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	2	0	2	0	multi-exon	FALSE	canonical	3	345	junction_2	41.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTTGCTTTTAA	NA	False	NA	24	True	AATAAA	-30	NA	119424785	119437983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.8	chr2	+	4690	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	7	3603	7	3153	multi-exon	FALSE	canonical	3	345	junction_2	41.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTTTCAAAGGGAAAAG	NA	False	NA	NA	False	AATATA	-25	NA	119424790	119434380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426993_119430068
ES.19842.9	chr2	+	739	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	14	628	8	-628	multi-exon	FALSE	canonical	3	71	junction_2	178.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTTGTATGGGAGT	NA	False	NA	84	True	GATAAA	-13	NA	119424791	119430599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119424916_119426739_119426824_119430068
ES.19843.1	chr2	-	178	1	Intergenic	novelGene_16458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAAT	3855	False	NA	NA	False	NA	NA	NA	119439006	119438828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119438800_119439000
ES.19844.1	chr2	+	168	1	Intergenic	novelGene_16459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	119442950	119443118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119443000_119443100
ES.19845.1	chr2	+	300	1	Intergenic	novelGene_16460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATACAATTGTTTCA	NA	False	NA	NA	False	AATATA	-2	NA	119446533	119446833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119446500_119446800
ES.19845.2	chr2	+	180	1	Intergenic	novelGene_16461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	119446535	119446715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119446500_119446700
ES.19846.1	chr2	-	1978	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-36	524	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTTTTTAAAGATTT	7444	False	NA	NA	False	AATAAA	-15	NA	119448986	119439468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ES.19846.10	chr2	-	1232	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-4	-190	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAAGAATTCAGGGGC	7476	False	NA	NA	False	AATAAA	-14	NA	119448954	119440182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ES.19846.11	chr2	-	965	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-11	-5	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTTGCTTATGTA	7469	False	NA	NA	False	NA	NA	NA	119448961	119440456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ES.19846.12	chr2	-	976	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-23	129	-23	-129	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGGTCTTTCTATAT	7457	False	NA	NA	False	GATAAA	-19	NA	119448973	119440580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ES.19846.13	chr2	-	846	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-20	256	-20	-256	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCAGTGTCCCTTGTGTCC	7460	False	NA	NA	False	NA	NA	NA	119448970	119440707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ES.19846.3	chr2	-	1638	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	-82	-474	-82	15	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTATCTTTTGCTGG	7398	False	NA	NA	False	NA	NA	NA	119449032	119439977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ES.19846.5	chr2	-	1719	7	NNC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	318.21778007452	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7474	False	NA	NA	False	NA	NA	NA	119448956	119439990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119446489_119446660_119448334_119448402_119448638
ES.19846.6	chr2	-	1985	6	NNC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-35	2	intron_retention	FALSE	canonical	0	0	junction_5	323.840083992084	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7445	False	NA	NA	False	NA	NA	NA	119448985	119439990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119446489_119446660_119448334
ES.19846.7	chr2	-	1505	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-85	2	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7395	False	NA	NA	False	NA	NA	NA	119449035	119439990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
ES.19846.8	chr2	-	1568	6	NNC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	269.471779598532	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7457	False	NA	NA	False	NA	NA	NA	119448973	119439990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119440846_119442232_119442339_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ES.19846.9	chr2	-	3763	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	-21	2	intron_retention	FALSE	canonical	3	645	junction_2	30.2572305408145	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTG	7459	False	NA	NA	False	NA	NA	NA	119448971	119439990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119448402_119448638
ES.19847.1	chr2	+	2191	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	393	376	-3	-376	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTTAAGCGTAAGTTG	NA	False	NA	19	True	AATAAA	-22	NA	119449171	119480265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.10	chr2	+	3439	2	NNC	ENSMUSG00000027306.16	novel	312	2	NA	NA	-1	-8130	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119449208	119452856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119451301_119451509
ES.19847.11	chr2	+	1811	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	12	1703	0	-619	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTTTAGTTGTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	119449209	119480022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.12	chr2	+	1439	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	12	2075	0	-991	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCCTATACATCTCCAA	NA	False	NA	24	True	AATATA	-40	NA	119449209	119479650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.14	chr2	+	2263	12	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	478.269504576933	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTTCATTGTTTTAAGC	NA	False	NA	11	True	AATAAA	-14	NA	119449210	119480257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119452573_119452693_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.15	chr2	+	2395	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	432	133	1	-133	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTTACTGACTACA	NA	False	NA	NA	False	NA	NA	NA	119449210	119480508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.16	chr2	+	1528	11	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	-991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	389.015732329683	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCCTATACATCTCCAA	NA	False	NA	24	True	AATATA	-40	NA	119449210	119479650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464209_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.17	chr2	+	2075	10	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	-384	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	394.13195759796	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTTCATTGTTTTAAGC	NA	False	NA	11	True	AATAAA	-14	NA	119449210	119480257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119449377_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.18	chr2	+	2041	10	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	-377	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	398.524345957669	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTTTAAGCGTAAGTT	NA	False	NA	18	True	AATAAA	-21	NA	119449210	119480264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.19	chr2	+	955	4	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	432	19251	1	404	5prime_fragment	FALSE	canonical	3	927	junction_3	183.430883138279	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGGTACCTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	119449210	119461390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817
ES.19847.2	chr2	+	2325	11	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	4	-384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	382.881391556184	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTTCATTGTTTTAAGC	NA	False	NA	11	True	AATAAA	-14	NA	119449178	119480257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454449_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.20	chr2	+	2808	12	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	2678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	372.475702241543	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	119449210	119484403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373_119480888_119484369
ES.19847.21	chr2	+	4337	11	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	1	-383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	389.665446248445	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTCATTGTTTTAAGCG	NA	False	NA	12	True	AATAAA	-15	NA	119449210	119480258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474933_119475929_119477680_119479373
ES.19847.22	chr2	+	2033	10	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	2	-385	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	409.350283157332	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGGTTCATTGTTTTAAG	NA	False	NA	10	True	AATAAA	-13	NA	119449211	119480256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119479373
ES.19847.23	chr2	+	2618	12	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	478.269504576933	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGCATAAATCTATAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	119449212	119480635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119452594_119452693_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.24	chr2	+	1408	10	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	37	-1015	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	394.13195759796	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAACTAAAGTAGTTTTC	NA	False	NA	0	True	AATATA	-16	NA	119449246	119479626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119449377_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.25	chr2	+	2376	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	50	1100	38	-16	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAATGTGGTAGCATAA	NA	False	NA	NA	False	AATAAA	-5	NA	119449247	119480625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.26	chr2	+	177	1	Intergenic	novelGene_16463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	119456883	119457060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119456900_119457100
ES.19847.27	chr2	+	4449	8	NIC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	8919	-386	intron_retention	FALSE	canonical	3	977	junction_2	117.374683499171	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGGTTCATTGTTTTAA	NA	False	NA	9	True	AATAAA	-12	NA	119458128	119480255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.28	chr2	+	2146	8	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	12036	3	11605	-3	3prime_fragment	FALSE	canonical	3	977	junction_2	117.374683499171	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAAATCTATAGTTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	119460814	119480638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.29	chr2	+	4664	2	Genic_Genomic	ENSMUSG00000027306.16	novel	2960	11	NA	NA	26076	-384	multi-exon	FALSE	non_canonical	0	0	junction_1	0	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTTCATTGTTTTAAGC	NA	False	NA	11	True	AATAAA	-14	NA	119475285	119480257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_119475622_119475929
ES.19847.3	chr2	+	2211	12	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	6	-385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	485.075132631555	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGGTTCATTGTTTTAAG	NA	False	NA	10	True	AATAAA	-13	NA	119449180	119480256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119462469_119462508_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.30	chr2	+	630	2	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	28810	729	28379	-729	3prime_fragment	FALSE	canonical	3	1186	junction_1	0	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCTTGTTCTGACTTT	504	False	NA	NA	False	AAAAAG	-12	NA	119477588	119479912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119477680_119479373
ES.19847.4	chr2	+	2083	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	-17	1460	6	-376	multi-exon	FALSE	canonical	3	97	junction_4	379.300265433633	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTTAAGCGTAAGTTG	NA	False	NA	19	True	AATAAA	-22	NA	119449180	119480265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.5	chr2	+	1563	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	406	991	10	-991	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCCTATACATCTCCAA	NA	False	NA	24	True	AATATA	-40	NA	119449184	119479650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.6	chr2	+	1472	11	NNC	ENSMUSG00000027306.16	novel	2960	11	NA	NA	-5	-1086	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	388.01140447157	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTGGTCATAATTT	NA	False	NA	-71	True	NA	NA	NA	119449204	119479555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465934_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.7	chr2	+	2533	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	429	-2	-2	2	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTATAGTTCAGTACTC	NA	False	NA	NA	False	AATAAA	-23	NA	119449207	119480643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.8	chr2	+	1915	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	429	616	-2	-616	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTAGTTGTACAACACT	NA	False	NA	NA	False	AATAAA	-20	NA	119449207	119480025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ES.19847.9	chr2	+	1502	9	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	429	5912	-2	-5912	5prime_fragment	FALSE	canonical	3	927	junction_3	157.348339679833	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATCTGCTTTACAAATT	NA	False	NA	NA	False	NA	NA	NA	119449207	119474729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264
ES.19848.1	chr2	+	157	1	Intergenic	novelGene_16464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAATAAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	119491460	119491617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119491500_119491600
ES.19849.1	chr2	-	216	1	Intergenic	novelGene_16462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTATTACACTCAGGT	8544	False	NA	NA	False	NA	NA	NA	119453701	119453485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119453500_119453700
ES.1985.1	chr1	-	175	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAACCATATATATAT	NA	False	NA	NA	False	NA	NA	NA	177987666	177987491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_177987500_177987700
ES.19850.1	chr2	-	2010	3	Antisense	novelGene_ENSMUSG00000027306.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	6001	False	NA	NA	False	NA	NA	NA	119471660	119465777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119466067_119468926_119469043_119470055
ES.19851.1	chr2	-	2944	1	Antisense	novelGene_ENSMUSG00000027306.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	119480323	119477379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119477400_119480300
ES.19852.1	chr2	-	4559	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-9	-3242	-3	3242	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCTTGTGCCTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	119493311	119482684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
ES.19852.10	chr2	-	1273	4	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	127.452823516085	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACCCTCAGCCTTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	119493288	119485932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119486274_119486848_119486924_119490482_119491141_119493089
ES.19852.2	chr2	-	1502	5	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	131.115407180087	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGCCTTTTTCTGCTGT	NA	False	NA	0	True	AATAAA	-22	NA	119493308	119485925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493073
ES.19852.3	chr2	-	1336	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	-29	1	-23	-1	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493331	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
ES.19852.4	chr2	-	1348	5	NIC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	132.411055052061	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493322	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493239
ES.19852.5	chr2	-	1495	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	-18	1	-11	-1	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493319	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ES.19852.6	chr2	-	1374	5	NNC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.142159157257	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493284	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119486274_119486848_119486924_119488754_119488961_119490417_119491141_119493260
ES.19852.7	chr2	-	1227	4	NIC	ENSMUSG00000027305.10	novel	1308	5	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	125.794364826976	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493297	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119486274_119488754_119488941_119490482_119491141_119493260
ES.19852.8	chr2	-	1363	5	NNC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	127.660683062562	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGCCTTTTTCTGCT	NA	False	NA	-2	True	AATAAA	-20	NA	119493289	119485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493191
ES.19852.9	chr2	-	1404	5	NNC	ENSMUSG00000027305.10	novel	1478	5	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	134.13868755881	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCAGCCTTTTTCTGC	NA	False	NA	-3	True	AATAAA	-19	NA	119493249	119485928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493109
ES.19853.1	chr2	-	158	1	Intergenic	novelGene_16465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	119499349	119499191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119499200_119499300
ES.19854.1	chr2	-	1162	1	Intergenic	novelGene_16466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAACGTGGAGAAACTG	NA	False	NA	NA	False	ATTAAA	-12	NA	119501365	119500203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119500200_119501400
ES.19855.1	chr2	+	3540	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	-56	1180	-56	-1180	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGCTGATGATCTCCAG	NA	False	NA	NA	False	AATAAA	-32	NA	119505492	119564708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.10	chr2	+	881	6	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	16	-1741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	46.7649441355381	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGCCTGACTGCTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	119505568	119564147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541490_119563967
ES.19855.11	chr2	+	823	5	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	17	-1741	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	51.9729496950096	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGCCTGACTGCTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	119505569	119564147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536111_119563966
ES.19855.12	chr2	+	6449	17	NIC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	17	-3	intron_retention	FALSE	canonical	3	65	junction_13	17.2399200621697	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTGGTCCAAAGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	119505569	119565885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.13	chr2	+	1063	7	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	17	199	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	42.361211293142	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTCAGTTGGGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	119505569	119543142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119542962
ES.19855.14	chr2	+	807	5	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	17	-1741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.9729496950096	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGCCTGACTGCTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	119505569	119564147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536111_119563982
ES.19855.15	chr2	+	719	5	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	21	24380	17	-1435	5prime_fragment	FALSE	canonical	3	77	junction_4	18.907670401189	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGGAAGAAGAACAAGAAA	NA	False	NA	NA	False	ACTAAA	-40	NA	119505569	119541508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445
ES.19855.18	chr2	+	4615	18	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.4823366465648	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAGATTTGGTCCAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	119505578	119565882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522609_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.19	chr2	+	2058	16	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	30	4498	26	3257	5prime_fragment	FALSE	canonical	3	65	junction_14	17.1495383805707	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGAGTGTAATCGCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	119505578	119561390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135
ES.19855.2	chr2	+	4145	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	-12	531	-12	-531	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTAGCCCCTTTGCCA	NA	False	NA	11	True	AATAAA	-21	NA	119505536	119565357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.20	chr2	+	2271	18	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	28	-2363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.7199450025512	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCTTCCTTGTCTGTCC	NA	False	NA	NA	False	TATAAA	-13	NA	119505580	119563525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531749_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.21	chr2	+	2905	19	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	29	-1186	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	26.1054958501126	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCCAGCTGATGAT	NA	False	NA	NA	False	AATAAA	-26	NA	119505581	119564702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265_119563974_119564513
ES.19855.22	chr2	+	1327	5	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	30	-6033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.9729496950096	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGAGCCCGGTGTG	NA	False	NA	NA	False	NA	NA	NA	119505582	119536910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119536226
ES.19855.24	chr2	+	1166	8	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	38	-1741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	39.5974643591413	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGCCTGACTGCTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	119505590	119564147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119563979
ES.19855.27	chr2	+	2795	1	Genic_Genomic	ENSMUSG00000027304.10	novel	NA	NA	NA	NA	7245	1316	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119564409	119567204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_119564400_119567200
ES.19855.28	chr2	+	1938	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	-121	1	-121	-1	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGCCTCCTCCCCTTC	NA	False	NA	22	True	AATAAA	-23	NA	119572696	119581743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
ES.19855.29	chr2	+	3963	8	NNC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	-40	10236	intron_retention	TRUE	non_canonical	0	0	junction_6	73.9544813119695	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAGCTATCTGTAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	119572777	119591980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119589196_119590385_119590463
ES.19855.3	chr2	+	4661	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	-1	4	-1	-4	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATTTGGTCCAAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	119505547	119565884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.30	chr2	+	8182	6	NIC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	-36	0	intron_retention	FALSE	canonical	3	155	junction_3	8.97997772825746	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572781	119581744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
ES.19855.31	chr2	+	1871	7	NNC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	-33	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	60.5651623368491	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGTGACTCCAGCCT	NA	False	NA	12	True	AATAAA	-13	NA	119572784	119581733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581113
ES.19855.32	chr2	+	1456	7	NNC	ENSMUSG00000027296.8	novel	1818	7	NA	NA	-24	14736	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	59.4605378007595	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTGTTTTATGTA	NA	False	NA	NA	False	AATAAA	-18	NA	119572793	119596480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119596266
ES.19855.33	chr2	+	1905	6	ISM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	19	9	19	-9	intron_retention	FALSE	canonical	3	153	junction_1	10.1508620323596	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGACTCCAGCCTCC	NA	False	NA	14	True	AATAAA	-15	NA	119572836	119581735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957
ES.19855.34	chr2	+	2730	18	Antisense	novelGene_ENSMUSG00000034032.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTGGCACTTCCGCCG	838	False	NA	NA	False	NA	NA	NA	119600799	119617993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_119600911_119601370_119601581_119601681_119601835_119602218_119602373_119602963_119603142_119603619_119603753_119603869_119604053_119604270_119604439_119604597_119604701_119605433_119605530_119605776_119605893_119607146_119607373_119608596_119608819_119610536_119610656_119613124_119613219_119613563_119613713_119614214_119614451_119617914
ES.19855.35	chr2	+	4747	20	NNC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	-10163	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.8291637052482	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119618050	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119618360_119628706_119629526_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.36	chr2	+	4592	19	ISM	ENSMUSG00000027298.18	ENSMUST00000110783.8	4460	20	339	0	339	0	3prime_fragment	FALSE	canonical	2	17	junction_1	61.3518742104575	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	9823	False	NA	NA	False	AATAAA	-22	NA	119628552	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119629526_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.37	chr2	+	3723	19	NNC	ENSMUSG00000027298.18	novel	4460	20	NA	NA	615	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0588527487817	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119628828	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119628966_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.38	chr2	+	3906	20	NNC	ENSMUSG00000027298.18	novel	4460	20	NA	NA	691	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.8291637052482	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119628904	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119629087_119629387_119629526_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.39	chr2	+	3639	19	NNC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	15	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0588527487817	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119629734	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119629788_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.4	chr2	+	3575	20	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	-1	-1201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5060916377211	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATTTTTTCAGAACAA	NA	False	NA	NA	False	AATAAA	-11	NA	119505547	119564687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119516851_119516893_119518044_119518115_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.40	chr2	+	3700	19	NNC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0588527487817	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGTTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	119629751	119648582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119629836_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.41	chr2	+	3697	19	NIC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	57.453819351064	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119629818	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119629897_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.42	chr2	+	4147	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	-158	0	29	0	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119629836	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.43	chr2	+	3683	19	NNC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	49	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0588527487817	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGCTTTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	119629856	119648578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119629928_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.44	chr2	+	3897	20	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	85	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.3330466047842	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTTTTTTAC	NA	False	NA	NA	False	AATAAA	-21	NA	119629892	119648584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119629985_119630177_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.46	chr2	+	3955	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	64.2210928389739	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGTTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	119629977	119648582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639261_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.48	chr2	+	5330	18	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	16	0	intron_retention	FALSE	canonical	3	227	junction_11	20.0013840351561	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119630010	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.5	chr2	+	2916	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	10	1738	6	-1738	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTGACTGCTGTAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	119505558	119564150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.50	chr2	+	4388	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	20	-6	intron_retention	FALSE	canonical	0	0	junction_12	87.6673003779377	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAAGCTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	119630014	119648579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641423_119641601_119641740_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.51	chr2	+	4233	18	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	37	-6	intron_retention	FALSE	canonical	3	240	junction_12	16.8391535840019	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAAGCTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	119630031	119648579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.52	chr2	+	4035	20	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	38	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.2885926975075	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119630032	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119635675_119635793_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.53	chr2	+	3866	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	46	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.3202826908596	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119630040	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632169_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.54	chr2	+	6028	18	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	57	5	intron_retention	FALSE	canonical	3	227	junction_11	19.6287339691544	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAAAGCTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	119630051	119648577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.55	chr2	+	2890	20	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	69	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	63.3330466047842	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTTTTTTACTGA	NA	False	NA	NA	False	AATAAA	-24	NA	119630063	119648587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124_119647476_119648507
ES.19855.57	chr2	+	6287	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	76	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.6405409339839	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119630070	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632169_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119646232_119647124
ES.19855.58	chr2	+	3754	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	236	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.5869114898868	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCAAAGCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	119630230	119648575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632872_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.6	chr2	+	3340	17	NIC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	7	-1201	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.5146977768247	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATTTTTTCAGAACAA	NA	False	NA	NA	False	AATAAA	-11	NA	119505559	119564687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.61	chr2	+	8594	16	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	241	-3	intron_retention	FALSE	canonical	3	227	junction_11	20.6638707786212	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGTTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	119630235	119648582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643444_119643643
ES.19855.62	chr2	+	3516	17	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	242	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_9	68.0879199546439	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119630236	119648585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.64	chr2	+	3443	17	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	244	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	68.2694283244704	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAAAGCTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	119630238	119648577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.65	chr2	+	3730	19	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	248	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.644326037858	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGCTTTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	119630242	119648578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636206_119638313_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.66	chr2	+	3866	20	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	256	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.9763858350335	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119630250	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119634425_119634592_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.67	chr2	+	5406	15	NIC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	151	-21	intron_retention	FALSE	canonical	3	227	junction_8	19.3629406182985	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAATAAAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	119633718	119648551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119633892_119635248_119635336_119636095_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.68	chr2	+	3631	12	NNC	ENSMUSG00000027298.18	novel	3989	19	NA	NA	-2168	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.089545835286	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCTTTGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	119637520	119648580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640958_119641037_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.69	chr2	+	2491	10	ISM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	10388	3	694	-3	3prime_fragment	FALSE	canonical	3	227	junction_3	23.7065391822594	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTGTTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	119640382	119648582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ES.19855.7	chr2	+	4067	17	NIC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	12	-1738	intron_retention	FALSE	canonical	3	71	junction_13	16.2013695408752	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTGACTGCTGTAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	119505564	119564150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119560453_119561135_119561232_119562884_119562997_119563265
ES.19855.70	chr2	+	5378	3	ISM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	12832	33	1500	-20	intron_retention	FALSE	canonical	3	264	junction_2	12.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119642826	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119643136_119643283_119643444_119643643
ES.19855.71	chr2	+	1864	3	ISM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	13150	33	1818	-20	3prime_fragment	FALSE	canonical	3	263	junction_2	0.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAATTGAAAC	NA	False	NA	NA	False	NA	NA	NA	119643144	119648552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119643444_119643643_119643781_119647124
ES.19855.72	chr2	+	1907	1	Intergenic	novelGene_16468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAAAAGAAACCTATAG	3063	False	NA	NA	False	NA	NA	NA	119653477	119655384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119653500_119655400
ES.19855.8	chr2	+	1786	12	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	17	7564	13	191	5prime_fragment	FALSE	canonical	3	77	junction_4	16.5933373067387	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACACTCAAGCTCCT	NA	False	NA	NA	False	TTTAAA	-4	NA	119505565	119558324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018
ES.19855.9	chr2	+	2492	9	NNC	ENSMUSG00000027304.10	novel	4664	18	NA	NA	15	96830	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	42.0617106166642	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	119505567	119662718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119505762_119522596_119522708_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119556619_119662590
ES.19856.1	chr2	-	1384	1	FSM	ENSMUSG00000064722.3	ENSMUST00000082788.3	129	1	-1228	-27	-1228	27	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGAGGAGGAGGTGT	NA	False	NA	NA	False	NA	NA	NA	119572665	119571281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119571300_119572700
ES.19857.1	chr2	-	2409	13	NNC	ENSMUSG00000027297.16	novel	2240	14	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_6	9.02888882052124	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTGAGTGAATGTGG	NA	False	NA	-4	True	NA	NA	NA	119588992	119581800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119582416_119582546_119582638_119582711_119583080_119583175_119583269_119583406_119583505_119583594_119583777_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
ES.19857.3	chr2	-	2634	10	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	340	0	intron_retention	FALSE	canonical	3	12	junction_9	5.82035593498169	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGTTCTCTGAGTGA	NA	False	NA	-10	True	NA	NA	NA	119588660	119581806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119582416_119582546_119583080_119583175_119583269_119583406_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459
ES.19857.4	chr2	-	2994	16	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_13	11.5815945937221	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCAGTTCTCTGAGT	NA	False	NA	-12	True	NA	NA	NA	119590895	119581808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119589004_119589143_119589236_119589388_119589775_119589948_119590037_119590182_119590732
ES.19857.5	chr2	-	2033	13	NNC	ENSMUSG00000027297.16	novel	2232	14	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.2902326936221	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCAGTTCTCTGAGT	NA	False	NA	-12	True	NA	NA	NA	119588931	119581808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119582416_119582546_119582638_119582711_119582847_119582971_119583080_119583175_119583269_119583406_119583505_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
ES.19857.6	chr2	-	2300	14	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	239	-1	intron_retention	FALSE	canonical	3	7	junction_13	8.25696765119613	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCAGTTCTCTGAG	NA	False	NA	-13	True	NA	NA	NA	119588761	119581809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119582416_119582546_119582638_119582711_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727
ES.19857.7	chr2	-	3336	18	NIC	ENSMUSG00000027297.16	novel	3080	20	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_13	11.3344866771854	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTCTTCAGTTCTCTGA	NA	False	NA	-14	True	NA	NA	NA	119590899	119581810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459_119588643_119588727_119588885_119589004_119589143_119589236_119589388_119589775_119589948_119590037_119590182_119590732
ES.19857.8	chr2	-	2228	14	FSM	ENSMUSG00000027297.16	ENSMUST00000182203.3	2232	14	2	2	-2	0	multi-exon	FALSE	canonical	3	10	junction_7	7.17243243134772	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTCTTCAGTTCTCTGA	NA	False	NA	-14	True	NA	NA	NA	119589004	119581810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
ES.19857.9	chr2	-	2460	14	ISM	ENSMUSG00000027297.16	ENSMUST00000028759.13	3080	20	1924	24	12	-20	intron_retention	FALSE	canonical	3	10	junction_7	7.35490819495478	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACAATAAACCCTT	NA	False	NA	-34	True	NA	NA	NA	119588988	119581830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588459
ES.19858.1	chr2	-	4985	25	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-256	4	combination_of_known_junctions	FALSE	canonical	3	58	junction_24	80.8678191041818	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTGTCACATTCAG	208	False	NA	3	True	AATAAA	-25	NA	119618274	119594435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.10	chr2	-	5057	26	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-257	-1	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	88.1886704741601	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGACTGTTTTGTCAC	207	False	NA	-3	True	AATAAA	-19	NA	119618275	119594441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.100	chr2	-	4840	25	NNC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	113.665986984771	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	484	False	NA	-8	True	AATAAA	-14	NA	119617998	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602520_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.101	chr2	-	4902	27	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	130.198755663529	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	489	False	NA	-8	True	AATAAA	-14	NA	119617993	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119615072_119615205_119617701_119617779_119617915
ES.19858.102	chr2	-	4722	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	114.608593046071	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	481	False	NA	-8	True	AATAAA	-14	NA	119618001	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614290_119614452_119617701_119617779_119617895
ES.19858.103	chr2	-	4646	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	107.149420268562	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	484	False	NA	-8	True	AATAAA	-14	NA	119617998	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614286_119614452_119617895
ES.19858.104	chr2	-	4512	22	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	113.650376872518	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	488	False	NA	-8	True	AATAAA	-14	NA	119617994	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.105	chr2	-	4475	23	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	124.373878166792	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	488	False	NA	-8	True	AATAAA	-14	NA	119617994	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701
ES.19858.107	chr2	-	5794	21	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	3568	-2	intron_retention	FALSE	canonical	3	356	junction_14	37.9270352123653	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATCTGGACTGTT	4069	False	NA	-10	True	AATAAA	-12	NA	119614413	119594448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214
ES.19858.109	chr2	-	4761	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	117.282810334678	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCTGACTGATCTGG	488	False	NA	-16	True	AATAAA	-6	NA	119617994	119594454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604434_119604594_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.11	chr2	-	4955	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-1	intron_retention	FALSE	canonical	3	111	junction_24	86.0959977776745	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGACTGTTTTGTCAC	488	False	NA	-3	True	AATAAA	-19	NA	119617994	119594441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.110	chr2	-	4618	22	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-4	12	combination_of_known_junctions	FALSE	canonical	3	58	junction_21	81.0668937966743	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGAGTGGACTTTACCT	493	False	NA	NA	False	NA	NA	NA	119617989	119597327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.111	chr2	-	4638	22	ISM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	29	2887	-4	12	5prime_fragment	FALSE	canonical	3	120	junction_21	69.0797626330764	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGAGTGGACTTTACCT	493	False	NA	NA	False	NA	NA	NA	119617989	119597327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.112	chr2	-	4708	23	FSM	ENSMUSG00000034032.16	ENSMUST00000139311.8	4714	23	6	0	1	0	multi-exon	FALSE	canonical	3	111	junction_22	84.1204002340526	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTGGAG	488	False	NA	NA	False	NA	NA	NA	119617994	119597339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.113	chr2	-	4855	20	NIC	ENSMUSG00000034032.16	novel	4714	23	NA	NA	-2	-22	intron_retention	FALSE	canonical	2	5	junction_18	114.06379125934	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	485	False	NA	NA	False	NA	NA	NA	119617997	119597361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701_119617779_119617895
ES.19858.114	chr2	-	2084	5	NIC	ENSMUSG00000034032.16	novel	1385	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	165	junction_4	112.592184453451	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAAATCCTCAAA	484	False	NA	NA	False	NA	NA	NA	119617998	119608131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701
ES.19858.15	chr2	-	5601	14	ISM	ENSMUSG00000034032.16	ENSMUST00000136419.8	4546	24	11414	-1	4116	1	intron_retention	FALSE	canonical	3	355	junction_11	35.2656864253803	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	NA	False	NA	-4	True	AATAAA	-18	NA	119606567	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870
ES.19858.16	chr2	-	4767	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	116.771393757204	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	487	False	NA	-4	True	AATAAA	-18	NA	119617995	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610545_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.17	chr2	-	4553	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_23	107.354479995015	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	493	False	NA	-4	True	AATAAA	-18	NA	119617989	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701_119617779_119617895
ES.19858.18	chr2	-	4679	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	115.773959075433	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	488	False	NA	-4	True	AATAAA	-18	NA	119617994	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603714_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.19	chr2	-	5283	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	1	intron_retention	FALSE	canonical	3	84	junction_24	90.0054010725035	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	482	False	NA	-4	True	AATAAA	-18	NA	119618000	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701_119617779_119617915
ES.19858.2	chr2	-	4837	26	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	105.930271405298	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGTTTTGTCACATT	484	False	NA	0	True	AATAAA	-22	NA	119617998	119594438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617667_119617779_119617895
ES.19858.20	chr2	-	5548	24	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	1	intron_retention	FALSE	canonical	3	111	junction_23	87.8050771254038	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	481	False	NA	-4	True	AATAAA	-18	NA	119618001	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701_119617779_119617895
ES.19858.22	chr2	-	7092	21	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	24	1	intron_retention	FALSE	canonical	3	165	junction_20	65.8957320317485	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	525	False	NA	-4	True	AATAAA	-18	NA	119617957	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605893_119607146_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
ES.19858.23	chr2	-	5687	24	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	1	intron_retention	FALSE	canonical	3	111	junction_23	87.5288772224692	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	488	False	NA	-4	True	AATAAA	-18	NA	119617994	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.24	chr2	-	4789	25	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	137.630443176242	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	473	False	NA	-4	True	AATAAA	-18	NA	119618009	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602520_119602968_119603140_119603618_119603754_119603870_119603988_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.26	chr2	-	4926	27	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	127.755875048733	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGGACTGTTTTGTCA	500	False	NA	-4	True	AATAAA	-18	NA	119617982	119594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119615072_119615216_119617701_119617779_119617895
ES.19858.27	chr2	-	5369	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	0	intron_retention	FALSE	canonical	3	84	junction_24	89.6344040471564	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	484	False	NA	-5	True	AATAAA	-17	NA	119617998	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.29	chr2	-	4971	24	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-4	0	intron_retention	FALSE	canonical	2	2	junction_11	108.791314425913	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602520_119602968_119603140_119603618_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.3	chr2	-	4984	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	-239	-1	-239	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACTGTTTTGTCACAT	225	False	NA	-1	True	AATAAA	-21	NA	119618257	119594439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.30	chr2	-	4871	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	114.388153232754	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	483	False	NA	-5	True	AATAAA	-17	NA	119617999	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604512_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.31	chr2	-	5450	24	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	111	junction_23	87.9475913710962	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701_119617779_119617895
ES.19858.32	chr2	-	6797	20	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	120	junction_19	76.0140313625644	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	493	False	NA	-5	True	AATAAA	-17	NA	119617989	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119603140_119603618_119603754_119603870_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.33	chr2	-	5116	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1232	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	121.424523596165	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	1733	False	NA	-5	True	AATAAA	-17	NA	119616749	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614048_119616139_119616489_119616698
ES.19858.34	chr2	-	4870	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	105.072783966903	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	478	False	NA	-5	True	AATAAA	-17	NA	119618004	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595540_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.35	chr2	-	4702	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	106.78755356886	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	482	False	NA	-5	True	AATAAA	-17	NA	119618000	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604680_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.36	chr2	-	4288	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	130.765315387274	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	488	False	NA	-5	True	AATAAA	-17	NA	119617994	119594443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119598392_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605524_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.4	chr2	-	6781	22	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	120	junction_21	73.1492122735155	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	485	False	NA	-2	True	AATAAA	-20	NA	119617997	119594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605893_119607146_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.40	chr2	-	5745	23	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	2	junction_11	111.037044298791	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	493	False	NA	-6	True	AATAAA	-16	NA	119617989	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602520_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.41	chr2	-	6016	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-1	intron_retention	FALSE	canonical	3	111	junction_24	85.8588554288697	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.42	chr2	-	3523	19	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	135.555020490747	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	485	False	NA	-6	True	AATAAA	-16	NA	119617997	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601447_119605484_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.44	chr2	-	4454	24	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	93.2863145586315	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	493	False	NA	-6	True	AATAAA	-16	NA	119617989	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617915
ES.19858.45	chr2	-	5913	23	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	-1	intron_retention	FALSE	canonical	3	84	junction_22	93.286814459848	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	484	False	NA	-6	True	AATAAA	-16	NA	119617998	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.5	chr2	-	4679	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	119.602633459952	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	484	False	NA	-2	True	AATAAA	-20	NA	119617998	119594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.51	chr2	-	5663	22	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	2	-1	intron_retention	FALSE	canonical	3	58	junction_21	85.2679117842424	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	489	False	NA	-6	True	AATAAA	-16	NA	119617993	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119603140_119603618_119603754_119603870_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.52	chr2	-	4280	25	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	113.106758811704	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	484	False	NA	-6	True	AATAAA	-16	NA	119617998	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119598392_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.53	chr2	-	4615	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	118.491883219438	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.55	chr2	-	4717	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-5552	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	91.3248171212087	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	NA	False	NA	-6	True	AATAAA	-16	NA	119623570	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119623470
ES.19858.56	chr2	-	4551	24	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	109.385808944706	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	485	False	NA	-6	True	AATAAA	-16	NA	119617997	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.57	chr2	-	4561	24	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	108.091678514505	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	485	False	NA	-6	True	AATAAA	-16	NA	119617997	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.58	chr2	-	4824	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	114.092916519826	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	481	False	NA	-6	True	AATAAA	-16	NA	119618001	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600238_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.59	chr2	-	4931	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	-1	intron_retention	FALSE	canonical	3	84	junction_24	89.9079679913484	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	489	False	NA	-6	True	AATAAA	-16	NA	119617993	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19858.6	chr2	-	4990	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	-178	1	-169	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	295	False	NA	-2	True	AATAAA	-20	NA	119618187	119594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.60	chr2	-	4636	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	105.678627083352	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	472	False	NA	-6	True	AATAAA	-16	NA	119618010	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603714_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.62	chr2	-	4688	25	NNC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	136.972922861499	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604434_119604598_119604701_119605433_119605531_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.64	chr2	-	4971	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.549138472201	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595021_119595085_119595219_119595540_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614105_119614452_119617895
ES.19858.65	chr2	-	5295	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-1	intron_retention	FALSE	canonical	3	111	junction_24	86.2102464746634	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701_119617779_119617895
ES.19858.66	chr2	-	4901	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	114.476240329599	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	489	False	NA	-6	True	AATAAA	-16	NA	119617993	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614105_119614452_119617701_119617779_119617895
ES.19858.69	chr2	-	5914	24	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	58	junction_23	82.0553550077278	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	493	False	NA	-6	True	AATAAA	-16	NA	119617989	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.7	chr2	-	4734	24	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-227	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_23	93.0996985775802	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	237	False	NA	-2	True	AATAAA	-20	NA	119618245	119594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617895
ES.19858.70	chr2	-	4490	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_3	101.710159754187	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	488	False	NA	-6	True	AATAAA	-16	NA	119617994	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119598392_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
ES.19858.71	chr2	-	5132	24	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	6	junction_10	118.219941766945	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	493	False	NA	-6	True	AATAAA	-16	NA	119617989	119594444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617701_119617779_119617895
ES.19858.72	chr2	-	4919	27	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	129.978901337484	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATCTGGACTGTTTTG	484	False	NA	-7	True	AATAAA	-15	NA	119617998	119594445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119615072_119615216_119617701_119617779_119617915
ES.19858.74	chr2	-	4134	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	131.316881107834	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATCTGGACTGTTTTG	489	False	NA	-7	True	AATAAA	-15	NA	119617993	119594445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119598392_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701_119617779_119617895
ES.19858.76	chr2	-	4373	23	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	110.979085588306	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATCTGGACTGTTTTG	488	False	NA	-7	True	AATAAA	-15	NA	119617994	119594445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603123_119604278_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.77	chr2	-	4878	24	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	2	1	intron_retention	FALSE	canonical	3	120	junction_23	71.2804838114947	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATCTGGACTGTTTTG	484	False	NA	-7	True	AATAAA	-15	NA	119617998	119594445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.79	chr2	-	4946	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	131.666218353667	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATCTGGACTGTTTTG	487	False	NA	-7	True	AATAAA	-15	NA	119617995	119594445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604512_119604598_119604701_119605433_119605691_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.8	chr2	-	4982	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_23	102.732121991561	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	488	False	NA	-2	True	AATAAA	-20	NA	119617994	119594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614146_119614452_119617701
ES.19858.81	chr2	-	5238	24	NNC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_15	138.705015357932	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	488	False	NA	-8	True	AATAAA	-14	NA	119617994	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595540_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604339_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617915
ES.19858.82	chr2	-	5098	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	114.305317461612	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	512	False	NA	-8	True	AATAAA	-14	NA	119617970	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607706_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.83	chr2	-	4780	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	114.4380775791	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	474	False	NA	-8	True	AATAAA	-14	NA	119618008	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607350_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.84	chr2	-	4774	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-5261	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	91.3248171212087	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	119623279	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119623120
ES.19858.85	chr2	-	8329	25	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_15	133.118264044504	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	493	False	NA	-8	True	AATAAA	-14	NA	119617989	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604441_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119616500_119616709_119617779_119617895
ES.19858.86	chr2	-	5676	23	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_22	83.7374019141915	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	481	False	NA	-8	True	AATAAA	-14	NA	119618001	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617915
ES.19858.87	chr2	-	4549	25	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_23	110.357374017326	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	473	False	NA	-8	True	AATAAA	-14	NA	119618009	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701_119617779_119617915
ES.19858.88	chr2	-	5606	23	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	120	junction_22	72.0397617481296	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	488	False	NA	-8	True	AATAAA	-14	NA	119617994	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.89	chr2	-	4717	24	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	2	0	intron_retention	FALSE	canonical	2	5	junction_22	109.619189605099	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	484	False	NA	-8	True	AATAAA	-14	NA	119617998	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119617701_119617779_119617895
ES.19858.91	chr2	-	5378	24	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_17	108.996869589637	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	484	False	NA	-8	True	AATAAA	-14	NA	119617998	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605691_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617895
ES.19858.92	chr2	-	4783	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	114.653216265397	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	494	False	NA	-8	True	AATAAA	-14	NA	119617988	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604434_119604594_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.93	chr2	-	4929	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	112.583167480756	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	493	False	NA	-8	True	AATAAA	-14	NA	119617989	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595540_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.94	chr2	-	5736	23	NIC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_6	110.086526825174	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	493	False	NA	-8	True	AATAAA	-14	NA	119617989	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ES.19858.95	chr2	-	4858	25	NNC	ENSMUSG00000034032.16	novel	4744	25	NA	NA	-472	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	91.3248171212087	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	-8	True	NA	-8	True	AATAAA	-14	NA	119618490	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119618247
ES.19858.96	chr2	-	6087	22	NIC	ENSMUSG00000034032.16	novel	5458	26	NA	NA	2	0	intron_retention	FALSE	canonical	3	58	junction_21	85.5210785437336	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	489	False	NA	-8	True	AATAAA	-14	NA	119617993	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119614452_119617915
ES.19858.97	chr2	-	4679	26	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	113.797012263064	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	504	False	NA	-8	True	AATAAA	-14	NA	119617978	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603131_119603705_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ES.19858.98	chr2	-	6469	22	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_10	135.110385709355	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	488	False	NA	-8	True	AATAAA	-14	NA	119617994	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595540_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119602520_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701
ES.19858.99	chr2	-	4900	25	NNC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_6	118.985643391685	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCTGGACTGTTTT	493	False	NA	-8	True	AATAAA	-14	NA	119617989	119594446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600189_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
ES.19859.1	chr2	-	160	1	Intergenic	novelGene_16467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	119626783	119626623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119626600_119626800
ES.1986.1	chr1	+	2518	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	-36	6320	-36	80	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGAGGAAAACGAAGTC	NA	False	NA	103	True	AGTAAA	-20	NA	178015061	178078547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ES.1986.10	chr1	+	4054	6	NNC	ENSMUSG00000026502.14	novel	2590	6	NA	NA	141	1693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.6002421303957	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTTTATAGTTCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	178015238	178080160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071879_178072049_178076800
ES.1986.11	chr1	+	3955	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	142	1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.0845857309314	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTTTTATAGTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	178015239	178080158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065557_178070179_178070272_178071906_178072049_178076800
ES.1986.12	chr1	+	3875	4	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	143	1694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.4644876010491	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	178015240	178080161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178070177_178070272_178071911_178072049_178076800
ES.1986.13	chr1	+	1937	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	146	-318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.2572812102523	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTCATTTTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	178015243	178078149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070276_178071911_178072049_178076800
ES.1986.14	chr1	+	3850	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	154	1694	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	88.9508291136176	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	178015251	178080161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071923_178072049_178076875
ES.1986.15	chr1	+	3960	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	156	1697	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.032460690283	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015253	178080164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076783
ES.1986.17	chr1	+	4029	6	NIC	ENSMUSG00000026502.14	novel	690	8	NA	NA	-155	1697	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	85.6691309632589	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015257	178080164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178015524_178046019_178046110_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ES.1986.18	chr1	+	2151	4	NIC	ENSMUSG00000026502.14	novel	2590	6	NA	NA	-137	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.3146529162199	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTGATTTTGATTGAT	NA	False	NA	23	True	AGTAAA	-20	NA	178015275	178078467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178015524_178070177_178070272_178071906_178072049_178076800
ES.1986.19	chr1	+	3900	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	-122	1691	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	89.2114762796805	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTTTTATAGTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	178015290	178080158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071923_178072049_178076783
ES.1986.2	chr1	+	4207	6	FSM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	80	-1697	-35	1697	multi-exon	FALSE	canonical	3	14	junction_1	77.2321176713419	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015062	178080164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ES.1986.20	chr1	+	971	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	-119	311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.032460690283	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGGCGCAGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	178015293	178077215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076783
ES.1986.21	chr1	+	3923	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	-116	1694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.2572812102523	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	178015296	178080161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071880_178072049_178076800
ES.1986.24	chr1	+	2294	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	178019423	178021717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178019400_178021700
ES.1986.25	chr1	+	2830	1	NIC	ENSMUSG00000026502.14	novel	2590	6	NA	NA	-18191	-8597	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAGAAAAAGTAGT	NA	False	NA	NA	False	NA	NA	NA	178065477	178068307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178065500_178068300
ES.1986.26	chr1	+	3599	3	ISM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	55193	-1694	-13493	1694	3prime_fragment	FALSE	canonical	3	163	junction_2	1	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTATAGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	178070175	178080161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_178070272_178071906_178072049_178076800
ES.1986.28	chr1	+	157	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	178070451	178070608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178070500_178070600
ES.1986.4	chr1	+	3984	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	115	4703	115	1697	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015212	178080164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ES.1986.5	chr1	+	3742	3	NIC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	115	1691	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTTTTATAGTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	178015212	178080158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178015524_178065477_178065551_178076800
ES.1986.6	chr1	+	3967	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	115	1697	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	72.980733758986	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015212	178080164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071923_178072049_178076800
ES.1986.8	chr1	+	1687	6	FSM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	232	671	117	-671	multi-exon	FALSE	canonical	3	14	junction_1	77.2321176713419	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGTGTTTTTGCACAT	NA	False	NA	NA	False	AATGAA	-15	NA	178015214	178077796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ES.1986.9	chr1	+	4016	6	NNC	ENSMUSG00000026502.14	novel	2590	6	NA	NA	132	1690	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.7638533008425	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAATGTTTTATAGTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	178015229	178080157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071923_178072049_178076800
ES.19860.1	chr2	-	161	1	Intergenic	novelGene_16469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	6406	False	NA	NA	False	NA	NA	NA	119659745	119659584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119659600_119659700
ES.19861.1	chr2	-	177	1	Intergenic	novelGene_16470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAT	6011	False	NA	NA	False	NA	NA	NA	119660140	119659963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119660000_119660100
ES.19862.1	chr2	+	156	1	Intergenic	novelGene_16471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	119670523	119670679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119670500_119670700
ES.19863.1	chr2	-	176	1	Intergenic	novelGene_16472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATTTAAATGG	NA	False	NA	NA	False	NA	NA	NA	119681186	119681010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119681000_119681200
ES.19864.1	chr2	+	11842	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24755	14	intron_retention	TRUE	non_canonical	0	0	junction_13	59.7961881810453	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGCCTGGTTGAAGAA	7897	False	NA	28	True	AATAAA	-39	NA	119702953	119798244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765821_119769063_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.10	chr2	+	12378	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24698	-103	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGAAAGTGATTATT	7954	False	NA	8	True	ATTAAA	-18	NA	119703010	119798127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.11	chr2	+	11217	22	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24698	-111	intron_retention	FALSE	canonical	2	10	junction_13	65.4175841609908	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCTGCTTTTGAAAG	7954	False	NA	0	True	ATTAAA	-10	NA	119703010	119798119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769119_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.12	chr2	+	12136	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24683	0	intron_retention	FALSE	canonical	3	37	junction_13	53.5277254448977	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	7969	False	NA	14	True	AATAAA	-25	NA	119703025	119798230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.13	chr2	+	12061	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24680	-107	intron_retention	FALSE	canonical	3	10	junction_14	60.3755731224779	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	7972	False	NA	4	True	ATTAAA	-14	NA	119703028	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771705_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.14	chr2	+	7638	17	NNC	ENSMUSG00000033943.16	novel	649	4	NA	NA	-24678	1236	intron_retention	FALSE	canonical	3	67	junction_1	37.9777381336751	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	7974	False	NA	NA	False	ATTAAA	-20	NA	119703030	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.15	chr2	+	11598	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24676	-107	intron_retention	FALSE	canonical	0	0	junction_5	62.549286351968	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	7976	False	NA	4	True	ATTAAA	-14	NA	119703032	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.16	chr2	+	11325	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24669	-1127	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTGATTTCCTTTTTA	7983	False	NA	NA	False	AATGAA	-21	NA	119703039	119797103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.17	chr2	+	8752	17	NNC	ENSMUSG00000033943.16	novel	649	4	NA	NA	-24655	2703	intron_retention	FALSE	canonical	3	37	junction_13	41.2354140878929	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCTTCTCTTGAG	7997	False	NA	NA	False	NA	NA	NA	119703053	119780386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.18	chr2	+	10948	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24433	1120	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTTCCGGTGCCTGGG	8219	False	NA	NA	False	AAAACA	-10	NA	119703275	119796962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.19	chr2	+	12058	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24424	-2	intron_retention	FALSE	canonical	3	35	junction_13	53.7028159276897	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	8228	False	NA	12	True	AATAAA	-23	NA	119703284	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.2	chr2	+	12090	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24748	-2	intron_retention	FALSE	canonical	3	29	junction_1	56.5525668439122	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	7904	False	NA	12	True	AATAAA	-23	NA	119702960	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.20	chr2	+	7048	17	NNC	ENSMUSG00000033943.16	novel	649	4	NA	NA	-24421	1233	intron_retention	FALSE	canonical	3	37	junction_13	41.2354140878929	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGTGTCTTACTC	8231	False	NA	NA	False	ATTAAA	-17	NA	119703287	119778916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.21	chr2	+	11950	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24421	-110	intron_retention	FALSE	canonical	3	15	junction_17	58.7092737817231	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGCTTTTGAAAGT	8231	False	NA	1	True	ATTAAA	-11	NA	119703287	119798120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778778_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.22	chr2	+	10147	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24408	-943	intron_retention	FALSE	canonical	2	10	junction_14	62.4346435141885	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTCCTCTGTCCCT	8244	False	NA	NA	False	AGTAAA	-12	NA	119703300	119797287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769119_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.23	chr2	+	12167	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24402	-107	intron_retention	FALSE	canonical	1	2	junction_12	56.8522079933489	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	8250	False	NA	4	True	ATTAAA	-14	NA	119703306	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769123_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.26	chr2	+	7193	17	NNC	ENSMUSG00000033943.16	novel	864	4	NA	NA	-24401	1236	intron_retention	FALSE	canonical	1	1	junction_6	49.8077554202154	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	8251	False	NA	NA	False	ATTAAA	-20	NA	119703307	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751958_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.27	chr2	+	11428	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24398	-4	intron_retention	FALSE	canonical	0	0	junction_6	64.5777767982016	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	8254	False	NA	10	True	AATAAA	-21	NA	119703310	119798226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751879_119752243_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.28	chr2	+	12170	25	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24393	-4	intron_retention	FALSE	canonical	2	5	junction_19	63.5576619211947	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	8259	False	NA	10	True	AATAAA	-21	NA	119703315	119798226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119782300_119782446_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.29	chr2	+	11690	25	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24388	-2	intron_retention	FALSE	canonical	1	2	junction_13	62.3181799762762	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	8264	False	NA	12	True	AATAAA	-23	NA	119703320	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769123_119769268_119771702_119771882_119772209_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.3	chr2	+	12249	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24747	11	intron_retention	FALSE	canonical	3	29	junction_1	54.1820079094196	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGTGCCTGGTTGAA	7905	False	NA	25	True	AATAAA	-36	NA	119702961	119798241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.30	chr2	+	2709	3	NNC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	-24383	22	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	16.5	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTGAAATTTTTGTT	8269	False	NA	NA	False	NA	NA	NA	119703325	119748453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911
ES.19864.31	chr2	+	8378	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24382	-1399	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATGTTTCCACTATGC	8270	False	NA	NA	False	AATAAA	-21	NA	119703326	119794443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.32	chr2	+	9381	20	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24380	-103	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	58.5378633060963	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGAAAGTGATTATT	8272	False	NA	8	True	ATTAAA	-18	NA	119703328	119798127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.33	chr2	+	6706	16	NNC	ENSMUSG00000033943.16	novel	864	4	NA	NA	-24380	1229	intron_retention	FALSE	canonical	0	0	junction_10	50.4948842293289	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAACACTTTGTGTCTT	8272	False	NA	NA	False	ATTAAA	-13	NA	119703328	119778912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762413_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119776652_119776944_119777305
ES.19864.34	chr2	+	12032	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24379	-109	intron_retention	FALSE	canonical	1	1	junction_6	57.8877735702669	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCTTTTGAAAGTG	8273	False	NA	2	True	ATTAAA	-12	NA	119703329	119798121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751958_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.35	chr2	+	7060	16	NNC	ENSMUSG00000033943.16	novel	864	4	NA	NA	-24379	1236	intron_retention	FALSE	canonical	0	0	junction_5	50.7982501885864	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	8273	False	NA	NA	False	ATTAAA	-20	NA	119703329	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.36	chr2	+	9792	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24379	18	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTAGTTACTATTTC	8273	False	NA	NA	False	NA	NA	NA	119703329	119795860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.37	chr2	+	12401	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24367	11	intron_retention	FALSE	canonical	3	67	junction_1	50.6224070859294	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGTGCCTGGTTGAA	8285	False	NA	25	True	AATAAA	-36	NA	119703341	119798241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.38	chr2	+	11824	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24356	-107	intron_retention	FALSE	canonical	1	2	junction_1	58.9588302741564	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	8296	False	NA	4	True	ATTAAA	-14	NA	119703352	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703487_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.39	chr2	+	2622	1	Intergenic	novelGene_16473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTATTTTGAGAAAAGA	8500	False	NA	NA	False	AAGAAA	-14	NA	119703556	119706178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119703600_119706200
ES.19864.4	chr2	+	4699	13	NNC	ENSMUSG00000033943.16	novel	825	2	NA	NA	-24742	-2972	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	31.4963622238082	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCATTTCTTTTTTTTTT	7910	False	NA	NA	False	NA	NA	NA	119702966	119766260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629
ES.19864.40	chr2	+	7315	17	NNC	ENSMUSG00000033943.16	novel	864	4	NA	NA	-24087	1236	intron_retention	FALSE	canonical	1	2	junction_1	48.8140204628752	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	8565	False	NA	NA	False	ATTAAA	-20	NA	119703621	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703780_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.41	chr2	+	12037	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-23850	-2	intron_retention	FALSE	canonical	0	0	junction_1	62.1952228606978	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	8802	False	NA	12	True	AATAAA	-23	NA	119703858	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703922_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769123_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.42	chr2	+	5506	2	Antisense	novelGene_ENSMUSG00000081056.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCTAGCACTCTAGA	9028	False	NA	NA	False	NA	NA	NA	119704084	119710275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_119705960_119706644
ES.19864.43	chr2	+	4953	1	Antisense	novelGene_ENSMUSG00000081056.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGCACTCTAGAAGCAC	NA	False	NA	NA	False	NA	NA	NA	119705327	119710280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_119705300_119710300
ES.19864.44	chr2	+	9349	24	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-255	-1398	intron_retention	FALSE	canonical	2	5	junction_1	61.175071834765	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGTTTCCACTATGCA	NA	False	NA	NA	False	AATAAA	-22	NA	119727453	119794444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119728459_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778778_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.45	chr2	+	12269	24	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-29	-6	intron_retention	FALSE	canonical	3	29	junction_1	54.1820079094196	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATTTGGTGTTGGGAG	NA	False	NA	8	True	AATAAA	-19	NA	119727679	119798224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.46	chr2	+	12259	23	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-27	-107	intron_retention	FALSE	canonical	3	29	junction_1	56.4601995411937	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119727681	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.47	chr2	+	11837	24	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-13	-92	intron_retention	FALSE	canonical	3	29	junction_1	56.3888739377703	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTATTTTTTTAGAAAT	NA	False	NA	19	True	ATTAAA	-29	NA	119727695	119798138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.48	chr2	+	12106	24	FSM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	-10	1835	-10	-3	multi-exon	FALSE	canonical	3	29	junction_1	56.5525668439122	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGTTGGGAGGTT	NA	False	NA	11	True	AATAAA	-22	NA	119727698	119798227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.49	chr2	+	7276	17	ISM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	0	21143	0	1236	5prime_fragment	FALSE	canonical	3	29	junction_1	45.2518991314177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	119727708	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.5	chr2	+	6900	17	NNC	ENSMUSG00000033943.16	novel	649	4	NA	NA	-24709	1236	intron_retention	FALSE	canonical	2	16	junction_13	47.5433601436625	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGTCTTACTCATT	7943	False	NA	NA	False	ATTAAA	-20	NA	119702999	119778919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.50	chr2	+	9399	24	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	0	18	intron_retention	FALSE	canonical	2	16	junction_13	58.2273102567459	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTAGTTACTATTTC	NA	False	NA	NA	False	NA	NA	NA	119727708	119795860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.51	chr2	+	11982	24	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	0	-109	intron_retention	FALSE	canonical	1	2	junction_13	59.5925675070255	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCTTTTGAAAGTG	NA	False	NA	2	True	ATTAAA	-12	NA	119727712	119798121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769123_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.52	chr2	+	7671	23	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-2	-1398	intron_retention	FALSE	canonical	2	10	junction_14	63.3115737594701	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGTTTCCACTATGCA	NA	False	NA	NA	False	AATAAA	-22	NA	119727726	119794444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.53	chr2	+	2766	3	FSM	ENSMUSG00000033943.16	ENSMUST00000141776.8	2763	3	14	-17	-2	17	multi-exon	FALSE	canonical	3	29	junction_1	35.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAACTTGAAATTT	NA	False	NA	NA	False	NA	NA	NA	119727726	119748448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119727828_119733086_119734215_119746911
ES.19864.54	chr2	+	12104	24	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	15	-107	intron_retention	FALSE	canonical	3	29	junction_1	54.1820079094196	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119727743	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.55	chr2	+	7940	17	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	33	1232	intron_retention	FALSE	canonical	2	5	junction_1	45.5936107777175	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACACTTTGTGTCTTACT	NA	False	NA	NA	False	ATTAAA	-16	NA	119727818	119778915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119728459_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.56	chr2	+	11496	22	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	5302	-6	intron_retention	FALSE	canonical	2	10	junction_13	58.0776319926052	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAATTTGGTGTTGGGAG	NA	False	NA	8	True	AATAAA	-19	NA	119733087	119798224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.57	chr2	+	10810	23	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	6137	-4	intron_retention	FALSE	canonical	2	16	junction_12	54.2567358807158	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	474	False	NA	10	True	AATAAA	-21	NA	119733922	119798226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.58	chr2	+	10785	23	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	6403	-109	intron_retention	FALSE	canonical	0	0	junction_12	56.0783837495959	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCTTTTGAAAGTG	740	False	NA	2	True	ATTAAA	-12	NA	119734188	119798121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769103_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.59	chr2	+	6524	1	NIC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	-10227	22	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTGAAATTTTTGTT	8481	False	NA	NA	False	NA	NA	NA	119741929	119748453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119741900_119748500
ES.19864.60	chr2	+	10138	21	NNC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-4578	-9	intron_retention	FALSE	canonical	0	0	junction_10	56.0439782670717	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGAATTTGGTGTTGG	5229	False	NA	5	True	AATAAA	-16	NA	119747578	119798221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119747855_119750106_119750186_119750292_119750389_119751846_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119769067_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.61	chr2	+	7357	20	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	-1831	-199	intron_retention	FALSE	canonical	3	68	junction_9	51.0086082572686	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTGCTGGGTCCCCT	7976	False	NA	NA	False	NA	NA	NA	119750325	119795643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.62	chr2	+	6791	17	NNC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	2052	-769	intron_retention	FALSE	canonical	2	5	junction_11	62.1447088958505	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAATCTAGTGATGGAG	NA	False	NA	NA	False	AATAAA	-19	NA	119754208	119795073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119782446_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.63	chr2	+	8901	18	NNC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	2244	15	intron_retention	FALSE	non_canonical	0	0	junction_17	61.5370594729819	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACCAGAACCACATAGTT	NA	False	NA	NA	False	NA	NA	NA	119754400	119800077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172_119798231_119799998
ES.19864.64	chr2	+	8310	16	NNC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	2354	-107	intron_retention	FALSE	canonical	0	0	junction_6	57.3595288993516	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119754510	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119765818_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.65	chr2	+	3842	5	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	29189	29541	4741	-543	internal_fragment	FALSE	canonical	3	110	junction_2	14.972892172189	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGATCCAGTTATGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	119756897	119768689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629
ES.19864.66	chr2	+	5399	9	ISM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	29225	19685	4777	2694	internal_fragment	FALSE	canonical	3	35	junction_5	47.3048623293631	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGACTAATTTGTCT	NA	False	NA	NA	False	NA	NA	NA	119756933	119780377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305
ES.19864.67	chr2	+	8060	12	NIC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	-41	-107	intron_retention	FALSE	canonical	3	68	junction_1	43.1010728328059	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119765627	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.68	chr2	+	5348	12	NNC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	78	18	intron_retention	FALSE	canonical	3	37	junction_1	50.9314885795185	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTAGTTACTATTTC	NA	False	NA	NA	False	NA	NA	NA	119765746	119795860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119765818_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.69	chr2	+	7631	13	NNC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	84	-116	intron_retention	FALSE	canonical	0	0	junction_3	83.814610235262	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTAATTTCTGCTTTT	NA	False	NA	-5	True	ATTAAA	-5	NA	119766016	119798114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119766148_119769119_119769268_119771702_119772327_119774396_119774513_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.7	chr2	+	11318	23	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24701	-103	intron_retention	FALSE	canonical	2	10	junction_14	63.3115737594701	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGAAAGTGATTATT	7951	False	NA	8	True	ATTAAA	-18	NA	119703007	119798127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703073_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.71	chr2	+	7565	12	NNC	ENSMUSG00000033943.16	novel	13577	23	NA	NA	145	-107	intron_retention	FALSE	canonical	0	0	junction_11	67.1210821532362	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119766077	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792407_119794172
ES.19864.73	chr2	+	7806	13	NNC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	168	0	intron_retention	FALSE	canonical	1	1	junction_4	80.070932095653	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	NA	False	NA	14	True	AATAAA	-25	NA	119766100	119798230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119766148_119768972_119769268_119771702_119772327_119774400_119774513_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.74	chr2	+	8236	11	ISM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	40565	1942	2341	-110	3prime_fragment	FALSE	canonical	3	162	junction_7	23.4384299815495	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGCTTTTGAAAGT	NA	False	NA	1	True	ATTAAA	-11	NA	119768273	119798120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.75	chr2	+	3857	11	ISM	ENSMUSG00000033943.16	ENSMUST00000110774.8	13931	24	41261	5625	-2762	-1405	3prime_fragment	FALSE	canonical	3	162	junction_7	23.4384299815495	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTAGCTGATGTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	119768969	119794437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.77	chr2	+	7001	9	ISM	ENSMUSG00000033943.16	ENSMUST00000079934.12	13304	23	48668	1835	4141	-3	3prime_fragment	FALSE	canonical	3	162	junction_5	20.9090291501064	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGTTGGGAGGTT	NA	False	NA	11	True	AATAAA	-22	NA	119776376	119798227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.78	chr2	+	6550	10	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	4614	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	66.8480864847055	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACCAGAACCACATAGTT	NA	False	NA	NA	False	NA	NA	NA	119776849	119800077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172_119798235_119800062
ES.19864.79	chr2	+	5511	9	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	4646	-943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.858674300333	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTCCTCTGTCCCT	NA	False	NA	NA	False	AGTAAA	-12	NA	119776881	119797287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792407_119794172
ES.19864.80	chr2	+	6331	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	49593	110	5066	-110	3prime_fragment	FALSE	canonical	3	162	junction_4	22.3506380313441	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGCTTTTGAAAGT	NA	False	NA	1	True	ATTAAA	-11	NA	119777301	119798120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.81	chr2	+	3833	8	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	50212	1989	5685	399	3prime_fragment	FALSE	canonical	3	162	junction_4	22.3506380313441	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATACTTCTCCCTTATTT	NA	False	NA	NA	False	ACTAAA	-4	NA	119777920	119796241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.82	chr2	+	5075	7	NIC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	6089	-109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	73.6040457825217	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCTTTTGAAAGTG	NA	False	NA	2	True	ATTAAA	-12	NA	119778324	119798121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119792274_119792452_119794172
ES.19864.83	chr2	+	5307	9	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	6238	-107	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	88.0450878811533	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTTGAAAGTGAT	NA	False	NA	4	True	ATTAAA	-14	NA	119778473	119798123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119778775_119781566_119781695_119782300_119782446_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.84	chr2	+	6543	7	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	-8054	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	78.822056980687	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	NA	False	NA	12	True	AATAAA	-23	NA	119780740	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119782446_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.85	chr2	+	4861	7	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	53856	109	-7230	-109	3prime_fragment	FALSE	canonical	3	162	junction_3	23.6361305349811	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGCTTTTGAAAGTG	NA	False	NA	2	True	ATTAAA	-12	NA	119781564	119798121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.86	chr2	+	4966	7	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	53856	4	-7230	-4	3prime_fragment	FALSE	canonical	3	162	junction_3	23.6361305349811	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGGTGTTGGGAGGT	NA	False	NA	10	True	AATAAA	-21	NA	119781564	119798226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.87	chr2	+	5618	7	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	-7230	-103	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	78.822056980687	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGAAAGTGATTATT	NA	False	NA	8	True	ATTAAA	-18	NA	119781564	119798127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119782446_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.88	chr2	+	5334	1	NIC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	-2840	13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGGGTCAGATGAGT	NA	False	NA	NA	False	AAAAAG	-7	NA	119785954	119791288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119786000_119791300
ES.19864.89	chr2	+	5288	1	NIC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	-1346	32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGTCCTCCTAGCTTG	NA	False	NA	NA	False	NA	NA	NA	119787448	119792736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119787400_119792700
ES.19864.9	chr2	+	12482	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24699	0	intron_retention	FALSE	canonical	3	67	junction_1	51.1541648571319	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	7953	False	NA	14	True	AATAAA	-25	NA	119703009	119798230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.90	chr2	+	3962	2	FSM	ENSMUSG00000033943.16	ENSMUST00000131396.2	985	2	-2978	1	-887	-1	multi-exon	FALSE	canonical	3	238	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119787907	119792703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119791441_119792274
ES.19864.91	chr2	+	5188	5	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	60527	2	-559	-2	3prime_fragment	FALSE	canonical	3	162	junction_1	27.3952550636055	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTTGGGAGGTTT	NA	False	NA	12	True	AATAAA	-23	NA	119788235	119798228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.92	chr2	+	5377	5	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	60970	-630	-116	630	3prime_fragment	FALSE	canonical	3	162	junction_1	27.3952550636055	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATACTTTTATGATAA	NA	False	NA	NA	False	ATTAAA	-10	NA	119788678	119798860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.93	chr2	+	4573	4	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	63111	9	-66	-9	3prime_fragment	FALSE	canonical	3	203	junction_1	14.7196014438797	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGAATTTGGTGTTGG	NA	False	NA	5	True	AATAAA	-16	NA	119790819	119798221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119790933_119791206_119791441_119792274_119792452_119794172
ES.19864.94	chr2	+	3214	3	NIC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	-65	-1133	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	104	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTATGTTTGATTTCC	NA	False	NA	NA	False	AATGAA	-15	NA	119790820	119797097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119790933_119792274_119792452_119794172
ES.19864.95	chr2	+	4237	5	NNC	ENSMUSG00000033943.16	novel	13304	23	NA	NA	-14	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.2536088555179	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTATTTTTTTAGAAAT	NA	False	NA	19	True	ATTAAA	-29	NA	119790871	119798138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119790933_119791206_119791441_119792274_119792452_119794172_119794767_119794967
ES.19864.96	chr2	+	3657	2	ISM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	63876	1268	699	1120	3prime_fragment	FALSE	canonical	3	213	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTTCCGGTGCCTGGG	NA	False	NA	NA	False	AAAACA	-10	NA	119791584	119796962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119792452_119794172
ES.19865.1	chr2	-	5050	1	Antisense	novelGene_ENSMUSG00000033943.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGAGATAGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	119729913	119724863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119724900_119729900
ES.19865.2	chr2	-	6031	1	Antisense	novelGene_ENSMUSG00000033943.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGACCTCCTGTACAAA	9890	False	NA	NA	False	NA	NA	NA	119733292	119727261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119727300_119733300
ES.19865.3	chr2	-	1657	1	Antisense	novelGene_ENSMUSG00000033943.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAATAGCCAGGCTTG	9890	False	NA	NA	False	NA	NA	NA	119733292	119731635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119731600_119733300
ES.19866.1	chr2	-	3604	2	Antisense	novelGene_ENSMUSG00000033943.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCTAAGGTCAACAAAGG	NA	False	NA	NA	False	NA	NA	NA	119772305	119766266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_119769267_119771701
ES.19867.1	chr2	-	170	1	Intergenic	novelGene_16474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACTCATC	NA	False	NA	NA	False	NA	NA	NA	119777155	119776985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119777000_119777200
ES.19868.1	chr2	+	7229	30	NNC	ENSMUSG00000033902.13	novel	6942	30	NA	NA	-338	-6	intron_retention	FALSE	canonical	0	0	junction_24	5.37820501464458	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATTCTGAGAAGAGCG	3067	False	NA	42	True	AATAAA	-23	NA	119802841	119857883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852862_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.10	chr2	+	6673	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	-256	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	5.87499408983154	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCTAGCAAATTCTGA	3149	False	NA	34	True	AATAAA	-15	NA	119802923	119857875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119802962_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852333_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.12	chr2	+	7010	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	71	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.86714013240977	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTAGCAAATTCTGAGA	186	False	NA	36	True	AATAAA	-17	NA	119803250	119857877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803650_119821761_119821913_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.15	chr2	+	174	1	Intergenic	novelGene_16478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	119836727	119836901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119836700_119836900
ES.19868.16	chr2	+	5753	23	ISM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	40919	15	575	-15	3prime_fragment	FALSE	canonical	2	8	junction_1	4.42102415119557	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGCTAGCAAATTCTG	161	False	NA	33	True	AATAAA	-14	NA	119844098	119857874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.17	chr2	+	5029	15	ISM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	45239	14	-4123	-14	3prime_fragment	FALSE	canonical	3	12	junction_11	3.99297853124962	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCTAGCAAATTCTGA	4481	False	NA	34	True	AATAAA	-15	NA	119848418	119857875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.2	chr2	+	6792	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	-321	-6	intron_retention	FALSE	canonical	1	1	junction_1	5.1941206078497	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATTCTGAGAAGAGCG	3084	False	NA	42	True	AATAAA	-23	NA	119802858	119857883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119802962_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.3	chr2	+	7226	30	FSM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	-297	13	-297	-13	multi-exon	FALSE	canonical	2	8	junction_8	4.52526268609031	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCTAGCAAATTCTGAG	3108	False	NA	35	True	AATAAA	-16	NA	119802882	119857876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.4	chr2	+	7247	30	NNC	ENSMUSG00000033902.13	novel	6942	30	NA	NA	-288	-14	intron_retention	FALSE	canonical	0	0	junction_1	5.36026691084774	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCTAGCAAATTCTGA	3117	False	NA	34	True	AATAAA	-15	NA	119802891	119857875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803255_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.5	chr2	+	6801	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	-284	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4.86266959144414	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTAGCAAATTCTGAGA	3121	False	NA	36	True	AATAAA	-17	NA	119802895	119857877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803014_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.6	chr2	+	7654	25	NIC	ENSMUSG00000033902.13	novel	6942	30	NA	NA	-271	164	intron_retention	FALSE	canonical	2	8	junction_6	4.51155922787972	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCCTCACTTCCTTGG	3134	False	NA	NA	False	NA	NA	NA	119802908	119855984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119843212_119843392_119843576_119844099_119844261_119845103_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.7	chr2	+	5212	30	FSM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	-266	1996	-266	73	multi-exon	FALSE	canonical	2	8	junction_8	4.52526268609031	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGGACAGCAGTGATC	3139	False	NA	NA	False	AAGAAA	-14	NA	119802913	119855893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.8	chr2	+	6982	30	NNC	ENSMUSG00000033902.13	novel	6942	30	NA	NA	-266	-16	intron_retention	FALSE	canonical	2	5	junction_1	4.92198349468968	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTGCTAGCAAATTCT	3139	False	NA	32	True	AATAAA	-13	NA	119802913	119857873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803014_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19868.9	chr2	+	5119	31	NNC	ENSMUSG00000033902.13	novel	4687	31	NA	NA	-256	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.28898225874632	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGCCTCACTTCCTT	3149	False	NA	NA	False	NA	NA	NA	119802923	119855982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119803255_119803426_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ES.19869.1	chr2	-	174	1	Intergenic	novelGene_16475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACTGAAAATGGGGC	NA	False	NA	NA	False	NA	NA	NA	119806748	119806574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119806600_119806700
ES.1987.1	chr1	-	177	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAACTCAACA	NA	False	NA	NA	False	NA	NA	NA	178036243	178036066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_178036100_178036200
ES.19870.1	chr2	-	173	1	Intergenic	novelGene_16476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATCTAGTCTTTAACA	NA	False	NA	NA	False	NA	NA	NA	119810920	119810747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119810700_119810900
ES.19871.1	chr2	-	184	1	Intergenic	novelGene_16477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	119815019	119814835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_119814800_119815000
ES.19872.1	chr2	+	1378	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	0	-5	0	5	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCATGTTCCCCGTC	NA	False	NA	11	True	NA	NA	NA	119857963	119863080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ES.19872.10	chr2	+	7501	20	NIC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	3	369	intron_retention	FALSE	canonical	3	12	junction_9	49.4251721841145	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119857976	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119862133_119862321_119862482_119862594_119865152_119865400_119865538_119865676_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.11	chr2	+	2070	4	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	85	junction_1	38.262252939418	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857976	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119861354_119861787_119862482_119862594
ES.19872.12	chr2	+	1186	6	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	57.5902769571392	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857976	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862321_119862482_119862594
ES.19872.13	chr2	+	7117	26	NIC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	8	junction_11	46.7041754022057	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGTGGTAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	119857980	119873511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.15	chr2	+	4465	5	NNC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_1	65.3777485081889	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857980	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119859520_119859685_119860693_119860769_119861024_119861296_119862482_119862594
ES.19872.16	chr2	+	1259	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857980	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
ES.19872.17	chr2	+	4020	26	NIC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-4	369	intron_retention	FALSE	canonical	0	0	junction_7	42.8340798897327	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119857980	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119862947_119865054_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.18	chr2	+	4056	29	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-4	370	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	46.2249794428272	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTGTACCAGGCTGTT	NA	False	NA	15	True	TATAAA	-32	NA	119857980	119872446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119862850_119863621_119863761_119863917_119863988_119865054_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.19	chr2	+	6128	26	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-4	369	intron_retention	FALSE	canonical	0	0	junction_4	46.2782886459731	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119857980	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861358_119861787_119861884_119861982_119862133_119862321_119862482_119862594_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.2	chr2	+	2243	5	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	8	-1	intron_retention	FALSE	canonical	3	85	junction_1	32.1743298298504	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857971	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119862133_119862321_119862482_119862594
ES.19872.20	chr2	+	1294	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	53.7445087634283	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857984	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ES.19872.21	chr2	+	5009	27	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.2860446462439	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTGGTAAAGTACATG	NA	False	NA	NA	False	NA	NA	NA	119857987	119873514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861358_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119862947_119865054_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.22	chr2	+	3622	8	NNC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.347555234611	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119858020	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119859495_119859668_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ES.19872.24	chr2	+	4182	10	NNC	ENSMUSG00000098488.8	novel	4240	17	NA	NA	1116	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	7.30296743340222	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCTGTACCAGGCTG	NA	False	NA	13	True	TATAAA	-30	NA	119866139	119872444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119867001_119867227_119867577_119868218_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871286_119871601_119871789_119871875
ES.19872.26	chr2	+	1658	7	NNC	ENSMUSG00000098488.8	novel	2790	20	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8.53912563829967	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119869195	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870796_119871604_119871789_119871875
ES.19872.27	chr2	+	1261	5	NNC	ENSMUSG00000098488.8	novel	4240	17	NA	NA	835	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.4522724801834	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCTGTACCAGGCTG	NA	False	NA	13	True	TATAAA	-30	NA	119870182	119872444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119870248_119870338_119870444_119870623_119870956_119871598_119871789_119871875
ES.19872.3	chr2	+	4956	27	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-2	369	intron_retention	FALSE	canonical	0	0	junction_4	46.5050102282685	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119857971	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861358_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119863761_119863917_119863988_119865078_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866290_119866329_119866576_119866632_119866869_119867001_119867227_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871598_119871789_119871875
ES.19872.4	chr2	+	5969	26	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	-2	368	intron_retention	FALSE	canonical	1	1	junction_11	46.4878478744715	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCTGTACCAGGCTG	NA	False	NA	13	True	TATAAA	-30	NA	119857971	119872444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866290_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.5	chr2	+	1440	8	NNC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.8772503794539	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857972	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861358_119861787_119861884_119861982_119862133_119862321_119862482_119862594
ES.19872.6	chr2	+	1277	8	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	46.6533022651655	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857974	119863075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860623_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ES.19872.7	chr2	+	1284	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTTGTTCTCATGTTC	NA	False	NA	5	True	NA	NA	NA	119857974	119863074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
ES.19872.8	chr2	+	6261	25	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	1	369	intron_retention	FALSE	canonical	1	1	junction_6	46.0196214190812	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTGTACCAGGCTGT	NA	False	NA	14	True	TATAAA	-31	NA	119857974	119872445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119862482_119862594_119863761_119863917_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19872.9	chr2	+	4992	28	NNC	ENSMUSG00000033852.17	novel	5092	27	NA	NA	2	371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.658720885138	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTACCAGGCTGTTA	NA	False	NA	16	True	TATAAA	-33	NA	119857975	119872447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861702_119861884_119861982_119862133_119862321_119862482_119862594_119863761_119863917_119863988_119865054_119865152_119865400_119865538_119865676_119865806_119866065_119866107_119866285_119866329_119866576_119866632_119866869_119867001_119867227_119867312_119867538_119867577_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ES.19873.1	chr2	-	3794	22	NNC	ENSMUSG00000074899.7	novel	11654	66	NA	NA	29710	-403	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.17417409580361	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCCCGTCTCTAACG	NA	False	NA	NA	False	NA	NA	NA	119886449	119872376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119872766_119875477_119875561_119875664_119875767_119876082_119876149_119876648_119876754_119876860_119877038_119877188_119877379_119877510_119877729_119878050_119878222_119878302_119878498_119878746_119878952_119879096_119879294_119880104_119880318_119880542_119880730_119880829_119881087_119881176_119881315_119882008_119882156_119882247_119882339_119884809_119884983_119885506_119885585_119885852_119886042_119886226
ES.19874.1	chr2	+	1626	4	Antisense	novelGene_ENSMUSG00000027293.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.942809041582063	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTATGGTCATTGCCAAT	NA	False	NA	NA	False	AAAAAG	-22	NA	119925503	119933395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_119925754_119926765_119926834_119927584_119927774_119932276
ES.19874.2	chr2	+	1623	4	Antisense	novelGene_ENSMUSG00000027293.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.942809041582063	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACAGAGTATGGTCATT	NA	False	NA	NA	False	AAAAAG	-16	NA	119925517	119933389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_119925771_119926765_119926834_119927584_119927774_119932276
ES.19874.3	chr2	+	215	1	Intergenic	novelGene_16479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTGCTAGAAAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	119926240	119926455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119926200_119926500
ES.19875.1	chr2	-	3513	5	NNC	ENSMUSG00000027293.14	novel	3730	6	NA	NA	51	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.250577365666	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCTAGACTGTTCAAAT	NA	False	NA	NA	False	AATAAA	-29	NA	119985036	119919646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119922166_119932510_119932914_119958072_119958171_119967379_119967557_119984720
ES.19875.10	chr2	-	2636	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	19	1075	19	-1075	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTATGTTTTTCTCAC	NA	False	NA	-3	True	AAGAAA	-19	NA	119985068	119920730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ES.19875.11	chr2	-	2525	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	3	1202	3	-1202	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGAGCCTTCGGACCC	NA	False	NA	-3	True	AATAAA	-22	NA	119985084	119920857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ES.19875.2	chr2	-	3731	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	-1	0	1	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCACAGTTCCTAGACT	NA	False	NA	NA	False	AATAAA	-21	NA	119985087	119919654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ES.19875.3	chr2	-	3428	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	302	0	-302	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCTCTAAAATGCGTC	NA	False	NA	1	True	AATATA	-23	NA	119985087	119919957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ES.19875.4	chr2	-	2998	5	NIC	ENSMUSG00000027293.14	novel	3730	6	NA	NA	15	-304	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	102.120027418719	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGTCTCTAAAATGCG	NA	False	NA	-1	True	AATATA	-21	NA	119985072	119919959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119922166_119927443_119927609_119958072_119958171_119967379_119967557_119984720
ES.19875.6	chr2	-	2587	4	NIC	ENSMUSG00000027293.14	novel	3730	6	NA	NA	107	-314	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	112.969022302576	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTCGTGAGTCTGTCT	NA	False	NA	-11	True	AATATA	-11	NA	119984836	119919969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119922166_119958072_119958171_119967379_119967557_119984720
ES.19875.9	chr2	-	3234	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	4	492	4	-492	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCGTGTTTTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	119985083	119920147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ES.19876.1	chr2	+	252	1	Intergenic	novelGene_16480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	119996515	119996767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_119996500_119996800
ES.19877.1	chr2	+	185	1	Intergenic	novelGene_16483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTTAAAAATCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	120064770	120064955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120064800_120065000
ES.19878.1	chr2	-	4939	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	-462	0	-462	0	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCATCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	120076278	119996892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
ES.19878.10	chr2	-	1914	13	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	-305	8244	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	7.2033942616581	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATCATTGTTGGCTATG	NA	False	NA	NA	False	NA	NA	NA	120076121	120011645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166_120075555_120075896
ES.19878.11	chr2	-	131	1	Intergenic	novelGene_16481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAACAAAATAAAA	2282	False	NA	NA	False	NA	NA	NA	120044805	120044674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120044700_120044800
ES.19878.12	chr2	-	3804	3	Intergenic	novelGene_16482	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCCTGCTTGTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	120060713	120047381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120047981_120055075_120055895_120058327
ES.19878.2	chr2	-	4560	21	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	-425	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	8.08949936646267	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCATCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	120076241	119996892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166_120075555_120075896
ES.19878.3	chr2	-	4174	21	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	154	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	7.64460594144656	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGGTTCATCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	120075409	119996894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120037610_120037717_120075166
ES.19878.5	chr2	-	4756	21	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	-225	-2	intron_retention	FALSE	canonical	0	0	junction_12	9.61197170199746	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGGTTCATCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	120076041	119996894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120037610_120037717_120040293_120040405_120075166
ES.19878.6	chr2	-	4234	20	NNC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.27705837184073	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTGGTTCATCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120075582	119996895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119998526_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
ES.19878.7	chr2	-	4595	22	NIC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	95	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	8.54864697360729	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATTGGTTCATCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	120075721	119996896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120037610_120037717_120040293_120040405_120075166
ES.19878.8	chr2	-	3984	20	NNC	ENSMUSG00000050211.15	novel	4477	20	NA	NA	214	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.04901879741301	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATTGGTTCATCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	120075349	119996896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004755_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
ES.19878.9	chr2	-	1210	2	ISM	ENSMUSG00000050211.15	ENSMUST00000136845.8	4424	17	9773	9348	9773	-3587	internal_fragment	FALSE	canonical	2	18	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTATGATTGTT	NA	False	NA	NA	False	NA	NA	NA	120011922	120006240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120007426_120011897
ES.19879.1	chr2	-	2674	11	NIC	ENSMUSG00000046971.8	novel	3116	20	NA	NA	4017	4	intron_retention	FALSE	canonical	1	2	junction_9	5.11468474101777	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-35	NA	120138841	120130433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547_120134172_120135033_120135257_120135482_120135620_120137705_120137842_120138043_120138082_120138454_120138569_120138685
ES.19879.2	chr2	-	2908	16	ISM	ENSMUSG00000046971.8	ENSMUST00000054651.8	3116	20	2026	-13	238	4	intron_retention	FALSE	canonical	0	0	junction_10	5.07893252126424	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-35	NA	120142620	120130433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120131110_120131377_120131565_120132677_120132845_120133207_120133424_120133547_120133656_120133733_120133872_120134056_120134172_120135033_120135257_120135482_120135620_120137705_120137845_120138043_120138082_120138454_120138569_120138685_120138850_120141497_120141565_120141959_120142003_120142244
ES.1988.1	chr1	-	5006	1	Antisense	novelGene_ENSMUSG00000026502.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATGTCTCCTAAGTTA	NA	False	NA	NA	False	NA	NA	NA	178047739	178042733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_178042700_178047700
ES.19880.1	chr2	-	4341	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	-2	0	-2	0	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183608	120146941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.10	chr2	-	4208	24	NIC	ENSMUSG00000027291.16	novel	4055	26	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	1	10	junction_7	62.9415968376746	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGTTTCCTTGAG	NA	False	NA	NA	False	AATAAA	-9	NA	120183602	120146950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.11	chr2	-	4358	26	FSM	ENSMUSG00000027291.16	ENSMUST00000102501.10	4384	26	17	9	1	-9	multi-exon	FALSE	canonical	1	2	junction_24	81.8461972238173	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGTTTCCTTGAG	NA	False	NA	NA	False	AATAAA	-9	NA	120183601	120146950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120177337_120177371_120180644_120180711_120183395
ES.19880.12	chr2	-	4245	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	-40	134	-28	-134	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCATACTTAATTCTGT	NA	False	NA	-14	True	AATAAA	-22	NA	120183646	120147075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.13	chr2	-	3789	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	4	-136	intron_retention	FALSE	non_canonical	1	3	junction_1	62.710298972515	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGCATACTTAATTCT	NA	False	NA	-16	True	AATAAA	-20	NA	120183598	120147077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120147270_120147775_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.15	chr2	-	3952	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-136	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	85.3653911137295	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGCATACTTAATTCT	NA	False	NA	-16	True	AATAAA	-20	NA	120183601	120147077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.16	chr2	-	5961	22	NIC	ENSMUSG00000027291.16	novel	4055	26	NA	NA	0	-136	intron_retention	FALSE	canonical	3	9	junction_12	64.4113410951674	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGCATACTTAATTCT	NA	False	NA	-16	True	AATAAA	-20	NA	120183602	120147077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.17	chr2	-	4306	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-6	-136	intron_retention	FALSE	canonical	3	237	junction_14	26.1533213814549	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGCATACTTAATTCT	NA	False	NA	-16	True	AATAAA	-20	NA	120183596	120147077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.18	chr2	-	4256	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	62.2285215065318	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183336
ES.19880.2	chr2	-	4655	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	110.264328874855	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183601	120146941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156288_120156631_120159053_120159197_120159794_120160013_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.20	chr2	-	4038	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	27	-137	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	64.5600202856355	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183563	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.21	chr2	-	4140	24	NIC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-3	-137	combination_of_known_splicesites	FALSE	canonical	2	9	junction_22	62.9448403767673	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183609	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120180644_120180711_120183395
ES.19880.22	chr2	-	4267	26	FSM	ENSMUSG00000027291.16	ENSMUST00000129857.8	4055	26	1	-213	1	-137	multi-exon	FALSE	canonical	0	0	junction_23	82.3630402547162	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120179566_120179637_120180644_120180711_120183395
ES.19880.23	chr2	-	4066	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-137	combination_of_known_splicesites	FALSE	canonical	1	3	junction_22	64.1876124090689	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120183395
ES.19880.24	chr2	-	4038	23	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	66.0672084551622	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTGCATACTTAATTC	NA	False	NA	-17	True	AATAAA	-19	NA	120183601	120147078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174650_120180644_120180711_120183395
ES.19880.25	chr2	-	4300	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	intron_retention	FALSE	canonical	3	237	junction_14	26.0337863943466	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183605	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.27	chr2	-	5456	21	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	intron_retention	FALSE	canonical	1	1	junction_10	68.947371233427	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120154771_120155111_120155754_120155866_120156009_120156486_120156631_120163859_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.28	chr2	-	4280	24	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	2	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.2032722492194	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183600	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156223_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173787_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.29	chr2	-	4190	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	63.4303533193866	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155180_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.3	chr2	-	4206	24	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	84.7471497755828	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCTTGAGCCTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	120183601	120146943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169085_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.30	chr2	-	4053	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	62.8155399602001	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.34	chr2	-	3923	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	65.3162206322897	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.36	chr2	-	4218	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	63.210407019379	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183605	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156027_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.37	chr2	-	4160	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	62.6982965389722	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155150_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.38	chr2	-	4076	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	6	-138	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	63.1642621073138	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183584	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.4	chr2	-	4539	24	NIC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	237	junction_14	25.4267917585061	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTCCTTGAGCCTCC	NA	False	NA	NA	False	AATAAA	-14	NA	120183608	120146945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.40	chr2	-	3264	17	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-5270	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.5624468988763	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120169184	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153660_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161
ES.19880.41	chr2	-	5268	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	intron_retention	FALSE	canonical	3	237	junction_14	24.477681667408	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.42	chr2	-	4972	6	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-801	-138	intron_retention	FALSE	canonical	3	281	junction_5	14.5958898324152	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120154772	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120151268_120151367_120151518_120152090_120152137_120152338_120154182_120154671
ES.19880.43	chr2	-	4937	22	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	7	-138	intron_retention	FALSE	canonical	3	9	junction_11	65.7131469880634	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183583	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120154182_120154671_120154771_120155111_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.44	chr2	-	4332	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	62.3524786774529	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174469_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.45	chr2	-	3693	26	NNC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-2	-138	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	61.6261502935239	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183604	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120147270_120147775_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.47	chr2	-	3993	24	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	83.8403379551335	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGTGCATACTTAATT	NA	False	NA	-18	True	AATAAA	-18	NA	120183601	120147079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151208_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.48	chr2	-	6655	21	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-139	intron_retention	FALSE	canonical	0	0	junction_7	69.0517740539662	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183605	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120154771_120155111_120155746_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.49	chr2	-	4089	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	89	-139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.0163118212702	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183501	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150033_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.50	chr2	-	5457	23	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-3	-139	intron_retention	FALSE	canonical	0	0	junction_5	86.0094651720004	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183593	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152474_120153513_120153643_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.51	chr2	-	4152	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-139	intron_retention	FALSE	canonical	3	9	junction_12	64.0371954155881	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183601	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.52	chr2	-	5734	23	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	30	-139	intron_retention	FALSE	canonical	2	4	junction_7	65.0389107946572	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183560	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154666_120154771_120155111_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.53	chr2	-	5153	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	7	-139	intron_retention	FALSE	canonical	1	10	junction_6	63.9045808572864	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183583	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.54	chr2	-	4100	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-139	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	63.8773340052787	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTGTGCATACTTAAT	NA	False	NA	-19	True	AATAAA	-17	NA	120183601	120147080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.55	chr2	-	4187	24	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.7823460747522	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183601	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176772_120176874_120180644_120180711_120183395
ES.19880.56	chr2	-	6549	20	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	intron_retention	FALSE	canonical	3	237	junction_10	26.9064244869206	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183601	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120151518_120152090_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155754_120155866_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.57	chr2	-	4178	9	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-2653	-140	intron_retention	FALSE	canonical	3	247	junction_6	23.4783810131789	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120156624	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120154182_120154671_120156009_120156486
ES.19880.59	chr2	-	7956	24	NIC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-2	-140	intron_retention	FALSE	canonical	3	237	junction_15	26.0533841943291	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183592	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120180711_120183395
ES.19880.6	chr2	-	4369	25	NNC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.1020860502162	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTCCTTGAGCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	120183609	120146946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152474_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.60	chr2	-	4246	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9133001306825	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183601	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148643_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.61	chr2	-	4068	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	7	-140	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	66.0672084551622	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183583	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120180644_120180711_120183395
ES.19880.62	chr2	-	4218	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	2	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.0163118212702	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183600	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150064_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.63	chr2	-	4210	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-1	-140	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_20	62.1683980992129	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183603	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173787_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.64	chr2	-	4182	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	7	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.4430518917031	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183583	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154057_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.66	chr2	-	4128	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	12	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	84.0428854646378	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183578	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159183_120163870_120163991_120168965_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.67	chr2	-	4191	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.1529691824491	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183601	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151369_120151518_120152090_120152137_120152338_120152442_120153513_120153636_120154057_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.68	chr2	-	6618	23	NNC	ENSMUSG00000027291.16	novel	4055	26	NA	NA	0	-140	intron_retention	FALSE	canonical	0	0	junction_15	64.9159660224517	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183602	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169256_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.69	chr2	-	4168	25	NNC	ENSMUSG00000027291.16	novel	4055	26	NA	NA	0	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	63.2250719431953	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183602	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169256_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.7	chr2	-	4196	24	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	64.3157969641241	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGTTTCCTTGAG	NA	False	NA	NA	False	AATAAA	-9	NA	120183604	120146950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120163859_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.70	chr2	-	7227	18	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	intron_retention	FALSE	canonical	0	0	junction_9	130.663491828765	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183589	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120153513_120153643_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156284_120156631_120163870_120164001_120168946_120169068_120169161_120169984_120172464_120172558_120173673_120173773_120176098_120176142_120176808_120176874_120180644
ES.19880.71	chr2	-	5683	23	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	0	-140	intron_retention	FALSE	canonical	3	237	junction_15	25.0439283481533	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183590	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120174701_120176098_120176874_120180644_120180711_120183395
ES.19880.72	chr2	-	4203	25	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	14	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	63.2250719431953	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183576	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169317_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.73	chr2	-	5284	22	NNC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	1	-140	intron_retention	FALSE	canonical	0	0	junction_16	66.6959119526963	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGTGTGCATACTTAA	NA	False	NA	-20	True	AATAAA	-16	NA	120183601	120147081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120148591_120149946_120150039_120151132_120152137_120152338_120152442_120153513_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172554_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.74	chr2	-	2982	9	ISM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	28234	141	-1401	-141	intron_retention	FALSE	canonical	3	247	junction_6	24.5853106549419	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGGTGTGCATACTTA	NA	False	NA	-21	True	AATAAA	-15	NA	120155372	120147082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671
ES.19880.75	chr2	-	3879	24	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	-1	11	combination_of_known_splicesites	FALSE	canonical	1	10	junction_7	62.9415968376746	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGCCCATGAACCCA	NA	False	NA	NA	False	NA	NA	NA	120183603	120147280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.76	chr2	-	4004	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	-4	339	-4	11	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGCCCATGAACCCA	NA	False	NA	NA	False	NA	NA	NA	120183610	120147280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.77	chr2	-	4015	26	FSM	ENSMUSG00000027291.16	ENSMUST00000102501.10	4384	26	30	339	2	11	multi-exon	FALSE	canonical	1	2	junction_24	81.8461972238173	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTGCCCATGAACCCA	NA	False	NA	NA	False	NA	NA	NA	120183588	120147280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120177337_120177371_120180644_120180711_120183395
ES.19880.79	chr2	-	3120	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	14	1205	-2	361	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATGGCGGCCT	NA	False	NA	NA	False	NA	NA	NA	120183592	120148146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.8	chr2	-	3237	5	NIC	ENSMUSG00000027291.16	novel	4339	25	NA	NA	559	-9	intron_retention	FALSE	canonical	3	314	junction_2	1.87082869338697	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGTTTCCTTGAG	1193	False	NA	NA	False	AATAAA	-9	NA	120153412	120146950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151518_120152090_120152137_120152338
ES.19880.80	chr2	-	5146	12	NNC	ENSMUSG00000027291.16	novel	691	8	NA	NA	1	-3356	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.3464255592206	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTGTTCGTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	120183589	120159704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120160059_120160289_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.81	chr2	-	1672	12	NNC	ENSMUSG00000027291.16	novel	691	8	NA	NA	1	5815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.3464255592206	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAACCTGGGTCAATCT	NA	False	NA	NA	False	NA	NA	NA	120183589	120163131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120163593_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19880.9	chr2	-	4058	23	NIC	ENSMUSG00000027291.16	novel	4384	26	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	65.3162206322897	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGTTTCCTTGAG	NA	False	NA	NA	False	AATAAA	-9	NA	120183607	120146950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ES.19881.1	chr2	-	180	1	Intergenic	novelGene_16484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	120183922	120183742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120183700_120183900
ES.19882.1	chr2	+	3891	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	-41	-751	-41	-5	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGTCTTTTGTGTGTCT	NA	False	NA	NA	False	GATAAA	-2	NA	120234335	120254891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
ES.19882.10	chr2	+	4516	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	-525	789	19	45	multi-exon	FALSE	canonical	0	0	junction_16	3.61680597271051	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGCCTCTTCCTTTCGC	NA	False	NA	NA	False	NA	NA	NA	120234723	120291392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.11	chr2	+	2824	5	NNC	ENSMUSG00000062646.13	novel	1477	4	NA	NA	22	-1895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.11951543294907	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTTGAGTGATAGT	NA	False	NA	NA	False	NA	NA	NA	120234726	120248069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120234772_120235453_120235541_120236746_120236810_120241915_120242025_120245549
ES.19882.12	chr2	+	4151	25	NNC	ENSMUSG00000062646.13	novel	4780	24	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.71908553574964	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTTACAGGCTTAACAAAA	NA	False	NA	NA	False	NA	NA	NA	120234730	120291347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235141_120235453_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.13	chr2	+	4568	24	NNC	ENSMUSG00000062646.13	novel	4279	24	NA	NA	-2	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.94096319778249	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTACTGCCTCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	120235252	120291389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120253270_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.14	chr2	+	3655	22	NNC	ENSMUSG00000062646.13	novel	4780	24	NA	NA	-4117	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.22054065122113	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTCTTCCTTTCGCAT	NA	False	NA	NA	False	NA	NA	NA	120249864	120291394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120249967_120252505_120252686_120253117_120253270_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.15	chr2	+	3022	17	NNC	ENSMUSG00000118623.2	novel	2541	24	NA	NA	-25610	-43907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.22526646186017	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTTACAGGCTTAACAAAA	NA	False	NA	NA	False	NA	NA	NA	120260889	120291347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120260934_120261021_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.2	chr2	+	3873	6	NNC	ENSMUSG00000062646.13	novel	1477	4	NA	NA	-27	-1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.2	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTGAGTGATAGTGC	NA	False	NA	NA	False	NA	NA	NA	120234654	120248071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235541_120236746_120236810_120241634_120241816_120241915_120242025_120242766_120242879_120245549
ES.19882.3	chr2	+	3580	4	FSM	ENSMUSG00000062646.13	ENSMUST00000143409.8	1477	4	-164	-1939	-27	-1893	multi-exon	FALSE	canonical	2	5	junction_3	5.43650214343336	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTGAGTGATAGTGC	NA	False	NA	NA	False	NA	NA	NA	120234654	120248071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120245549
ES.19882.4	chr2	+	4663	25	NNC	ENSMUSG00000062646.13	novel	4780	24	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.8601867398698	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTCATGGTCTTT	NA	False	NA	7	True	NA	NA	NA	120234659	120292178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120234751_120235453_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.5	chr2	+	1913	6	NNC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-22	-1222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.2773621594641	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGCTGAAGAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	120234659	120252918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120251346_120251666_120252505
ES.19882.6	chr2	+	5355	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	-580	5	-13	-5	multi-exon	FALSE	canonical	0	0	junction_16	3.61680597271051	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGGTCATGGTCT	NA	False	NA	5	True	NA	NA	NA	120234668	120292176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.7	chr2	+	5027	25	NNC	ENSMUSG00000062646.13	novel	4780	24	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.71908553574964	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGGTCATGGTCT	NA	False	NA	5	True	NA	NA	NA	120234683	120292176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235141_120235453_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ES.19882.8	chr2	+	1793	6	NNC	ENSMUSG00000062646.13	novel	3099	5	NA	NA	-4	-669	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.38887743412299	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCATAATGTGGAA	NA	False	NA	NA	False	AATAAA	-16	NA	120234700	120253471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120235141_120235453_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
ES.19882.9	chr2	+	2099	5	FSM	ENSMUSG00000062646.13	ENSMUST00000154574.8	3099	5	329	671	1	-671	multi-exon	FALSE	canonical	3	9	junction_3	3.77491721763537	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATCATAATGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	120234705	120253469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505
ES.19883.1	chr2	-	2821	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	181.528455749818	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234554	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190010_120190046_120190519_120190573_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120234385
ES.19883.10	chr2	-	4743	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_6	138.447565507891	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234553	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120200203_120200293_120200983_120202004_120202110_120204964_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.11	chr2	-	5254	19	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	138.174205664846	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234559	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208968_120209186_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.12	chr2	-	2803	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	128.802562086319	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234590	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234442_120234552
ES.19883.13	chr2	-	5174	1	NIC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	43584	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120190966	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120185800_120191000
ES.19883.14	chr2	-	3150	2	ISM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	42613	0	42613	0	intron_retention	FALSE	canonical	3	396	junction_1	0	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120191937	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120187020_120190014
ES.19883.15	chr2	-	2868	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	258	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	176.668297948443	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234292	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120231732_120231804_120233190_120233252_120234207
ES.19883.16	chr2	-	4267	20	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_8	135.214920745618	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234564	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208968_120209186_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.18	chr2	-	4340	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	5	0	intron_retention	TRUE	non_canonical	0	0	junction_8	145.393049658121	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234545	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208968_120209186_120210256_120211247_120211310_120216254_120216373_120222661_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.19	chr2	-	2964	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_8	116.066977258291	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234548	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.2	chr2	-	2920	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_8	114.209531889923	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234593	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.20	chr2	-	2732	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	162.779101886822	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234311	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208469_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234286
ES.19883.22	chr2	-	2680	16	NNC	ENSMUSG00000033808.17	novel	2822	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	158.036479614325	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234576	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.23	chr2	-	2774	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	132.468147114693	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234559	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120186821_120186929_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.24	chr2	-	3007	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	159.930383292231	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234573	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120228921_120229029_120233190_120233252_120234385
ES.19883.25	chr2	-	2873	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	114.209531889923	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234552	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204974_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.29	chr2	-	2786	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	146.393738060102	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234545	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120233190_120233252_120234385
ES.19883.3	chr2	-	2926	20	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_8	102.185508348021	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234602	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.31	chr2	-	2842	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.325130877529	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234593	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234478_120234552
ES.19883.32	chr2	-	2797	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_8	102.502288441783	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234553	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.33	chr2	-	3021	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	154.892543397027	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234546	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.34	chr2	-	2855	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	139.89200425037	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTGTCTCTCTCATTTA	NA	False	NA	NA	False	TATAAA	-13	NA	120234537	120185793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190573_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202103_120204962_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.35	chr2	-	2800	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	174.746244594841	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTGTCTCTCTCAT	NA	False	NA	NA	False	TATAAA	-10	NA	120234595	120185796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190016_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202113_120204966_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222701_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234442_120234552
ES.19883.36	chr2	-	2918	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_8	143.371068064288	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTGTCTCTCTCAT	NA	False	NA	NA	False	TATAAA	-10	NA	120234577	120185796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227947_120233190_120233252_120234385
ES.19883.41	chr2	-	2953	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	161.121196619191	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTGTCTCTCTCAT	NA	False	NA	NA	False	TATAAA	-10	NA	120234559	120185796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120231732_120231804_120233190_120233252_120234385
ES.19883.45	chr2	-	2946	22	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	167.922007055403	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACTAGTGTCTCTCTC	NA	False	NA	NA	False	TATAAA	-8	NA	120234596	120185798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120228921_120229029_120233190_120233252_120234385_120234478_120234552
ES.19883.46	chr2	-	3049	15	NNC	ENSMUSG00000033808.17	novel	2160	19	NA	NA	2036	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	190.706273239926	382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACTAGTGTCTCTCTC	NA	False	NA	NA	False	TATAAA	-8	NA	120232514	120185798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202112_120216269_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120231732
ES.19883.47	chr2	-	2736	20	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	231	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	135.068034564877	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACTAGTGTCTCTCTC	NA	False	NA	NA	False	TATAAA	-8	NA	120234319	120185798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234286
ES.19883.49	chr2	-	2801	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	143.248713452572	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACTAGTGTCTCTCTC	NA	False	NA	NA	False	TATAAA	-8	NA	120234600	120185798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234505
ES.19883.5	chr2	-	3745	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	102.502288441783	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234559	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.51	chr2	-	3753	12	NNC	ENSMUSG00000033808.17	novel	2160	19	NA	NA	21697	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.998787544468	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120212853	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187036_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247
ES.19883.52	chr2	-	3137	22	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	185.802140391734	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234559	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120228921_120229029_120233190_120233252_120234385
ES.19883.53	chr2	-	2564	16	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	149.003355666911	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234546	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120233190_120233252_120234385
ES.19883.54	chr2	-	6348	12	NNC	ENSMUSG00000033808.17	novel	2160	19	NA	NA	20109	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	128.27121318609	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120214441	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071
ES.19883.56	chr2	-	2890	20	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	102.185508348021	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234576	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202115_120204395_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.57	chr2	-	3021	22	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	275	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	193.540353623542	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234275	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120210994_120211095_120211247_120211310_120216254_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234207
ES.19883.58	chr2	-	2832	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	139.379123257395	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234587	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234478_120234552
ES.19883.59	chr2	-	2958	19	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	135.690916023727	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234559	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204389_120204461_120205899_120205994_120208373_120208469_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.60	chr2	-	4446	14	NNC	ENSMUSG00000033808.17	novel	2160	19	NA	NA	4442	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	177.825324838298	382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120230108	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202112_120216269_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842
ES.19883.62	chr2	-	2807	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	132.468147114693	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234559	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120186636_120186704_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.63	chr2	-	2415	14	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1	junction_11	193.278442183855	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234559	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193419_120193842_120193917_120199724_120199829_120200923_120200983_120216254_120216373_120222661_120222850_120224842_120224957_120227842_120227929_120231732_120231804_120233190_120233252_120234385
ES.19883.64	chr2	-	2782	21	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	137.054186364372	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234573	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234442_120234552
ES.19883.66	chr2	-	3542	21	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	186.596195030874	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACTAGTGTCTCTCT	NA	False	NA	NA	False	TATAAA	-7	NA	120234553	120185799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120210994_120211095_120211247_120211310_120216254_120216373_120218869_120219021_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.69	chr2	-	2815	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	114.209531889923	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAAAACTAGTGTCTCTC	NA	False	NA	NA	False	TATAAA	-6	NA	120234545	120185800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202074_120204977_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.7	chr2	-	2839	19	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	137.050871423806	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234576	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120234385
ES.19883.72	chr2	-	3183	19	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	102	intron_retention	FALSE	non_canonical	0	0	junction_8	133.799416854549	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGCTTTAAAGAGAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	120234559	120186351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190573_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.73	chr2	-	2049	20	NNC	ENSMUSG00000033808.17	novel	2897	20	NA	NA	0	-193	intron_retention	FALSE	non_canonical	0	0	junction_8	114.209531889923	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCATTTACACCATAAT	NA	False	NA	NA	False	TTTAAA	-15	NA	120234576	120186646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204964_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19883.74	chr2	-	1087	13	NNC	ENSMUSG00000033808.17	novel	1578	16	NA	NA	4	6269	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	138.96909628483	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGCAATTGATGCCTG	NA	False	NA	NA	False	NA	NA	NA	120234590	120205001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385_120234478_120234552
ES.19883.75	chr2	-	179	1	Intergenic	novelGene_16485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	120209182	120209003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120209000_120209200
ES.19883.9	chr2	-	7823	19	NNC	ENSMUSG00000033808.17	novel	2874	20	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_8	104.437012146905	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234554	120185792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202110_120204387_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ES.19884.1	chr2	-	173	1	Intergenic	novelGene_16486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGGAGCAAGCACGGAC	NA	False	NA	NA	False	NA	NA	NA	120256777	120256604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120256600_120256800
ES.19885.1	chr2	+	2604	20	NNC	ENSMUSG00000079110.13	novel	2622	21	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2.34786400244163	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATTCTCCTTATTAGC	NA	False	NA	NA	False	AATAAA	-20	NA	120307395	120335391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120307712_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120326337_120326555_120327458_120327496_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ES.19886.1	chr2	+	2689	1	Antisense	novelGene_ENSMUSG00000027288.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGGAACAAGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	120360044	120362733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120360000_120362700
ES.19887.1	chr2	-	9793	21	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	8492	-829	-35	829	3prime_fragment	FALSE	canonical	3	679	junction_17	181.125226017802	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCGGTTTATGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	120385796	120336471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711
ES.19887.10	chr2	-	8575	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_17	278.326290187477	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTATTTGTCTGCAT	9809	False	NA	-7	True	AATAAA	-20	NA	120394300	120337301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362183_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.101	chr2	-	6518	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_18	347.360427407794	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCAGTGTCTCACTA	9790	False	NA	57	True	TTTAAA	-25	NA	120394319	120340093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120368737_120368933_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.102	chr2	-	6380	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-88	2793	-52	1	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCAGTGTCTCACTA	9733	False	NA	57	True	TTTAAA	-25	NA	120394376	120340093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.103	chr2	-	6218	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	1	intron_retention	FALSE	canonical	3	14	junction_20	290.673059467161	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCAGTGTCTCACTA	9810	False	NA	57	True	TTTAAA	-25	NA	120394299	120340093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120394167
ES.19887.104	chr2	-	3994	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-33	1	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCAGTGTCTCACTA	9752	False	NA	57	True	TTTAAA	-25	NA	120394357	120340093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.105	chr2	-	6295	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	51	junction_21	279.463682995445	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGCAGTGTCTCAC	9810	False	NA	55	True	TTTAAA	-23	NA	120394299	120340095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.109	chr2	-	4259	18	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-2	-3	intron_retention	TRUE	canonical	0	0	junction_13	305.526976818765	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTATGTGCAGTGTCTC	9792	False	NA	53	True	TTTAAA	-21	NA	120394317	120340097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357362_120364931_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.111	chr2	-	6260	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-1	-6	intron_retention	FALSE	canonical	2	15	junction_19	286.816910240662	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATGTGCAGTGT	9784	False	NA	50	True	TTTAAA	-18	NA	120394325	120340100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120385711_120385797_120394167
ES.19887.112	chr2	-	4147	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	44	junction_17	264.832022232962	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATGTGCAGTGT	9790	False	NA	50	True	TTTAAA	-18	NA	120394319	120340100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.113	chr2	-	3945	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-6	intron_retention	FALSE	canonical	3	51	junction_19	303.670418367825	1247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATGTGCAGTGT	9788	False	NA	50	True	TTTAAA	-18	NA	120394321	120340100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394173
ES.19887.114	chr2	-	6985	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-8	intron_retention	FALSE	non_canonical	0	0	junction_17	278.326290187477	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTATGTGCAGT	9788	False	NA	48	True	TTTAAA	-16	NA	120394321	120340102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363322_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.115	chr2	-	6086	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-18	-61	intron_retention	FALSE	canonical	3	17	junction_18	276.617511195513	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATTCCTCCTTTTGA	9767	False	NA	-5	True	AATAGA	-14	NA	120394342	120340155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120376323_120376386_120385711_120385797_120394167
ES.19887.117	chr2	-	3817	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	8	-64	intron_retention	FALSE	canonical	3	47	junction_17	270.152951647674	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTAATTCCTCCTTT	9802	False	NA	-8	True	AATAGA	-11	NA	120394307	120340158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120385711_120385797_120394167
ES.19887.119	chr2	-	5757	20	NNC	ENSMUSG00000027288.17	novel	6391	19	NA	NA	507	-64	intron_retention	FALSE	non_canonical	0	0	junction_18	296.355648436319	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTAATTCCTCCTTT	NA	False	NA	-8	True	AATAGA	-11	NA	120369834	120340158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120365637_120365699_120366161_120369775
ES.19887.120	chr2	-	6228	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-56	2913	-20	-119	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGATTTTTGTTTTA	9765	False	NA	-63	True	NA	NA	NA	120394344	120340213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.121	chr2	-	3834	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-123	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTTTGTGATTTTTGT	9788	False	NA	-67	True	NA	NA	NA	120394321	120340217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.123	chr2	-	5955	21	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	4	-158	intron_retention	FALSE	canonical	0	0	junction_9	358.615737942439	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTTGACCCTAATCAT	9798	False	NA	-102	True	ATTAAA	-22	NA	120394311	120340252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353168_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120376323_120376386_120385711_120385797_120394167
ES.19887.125	chr2	-	6130	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-1	-160	intron_retention	FALSE	non_canonical	0	0	junction_13	288.601153584562	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAGTTTGACCCTAATC	9813	False	NA	-104	True	ATTAAA	-20	NA	120394296	120340254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358826_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.128	chr2	-	6091	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-6	-162	intron_retention	FALSE	canonical	1	7	junction_20	285.59533238054	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCCAGTTTGACCCTAA	9808	False	NA	-106	True	ATTAAA	-18	NA	120394301	120340256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385762_120385797_120394167
ES.19887.129	chr2	-	6202	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-48	-167	intron_retention	FALSE	canonical	3	51	junction_21	279.463682995445	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGTTACCCAGTTTGAC	9737	False	NA	-111	True	ATTAAA	-13	NA	120394372	120340261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.13	chr2	-	9178	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_22	351.250646303926	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTATTTGTCTGCAT	9810	False	NA	-7	True	AATAAA	-20	NA	120394299	120337301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120392237_120392321_120394167
ES.19887.130	chr2	-	5913	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-16	3188	-9	331	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTCCTCCAACAAAGC	9805	False	NA	NA	False	NA	NA	NA	120394304	120340488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.131	chr2	-	5936	21	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-11	3504	-4	15	5prime_fragment	FALSE	canonical	3	679	junction_16	181.326611395018	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTGTTTTTAATAAGC	9810	False	NA	NA	False	ATTAAA	-23	NA	120394299	120340804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.132	chr2	-	3572	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-7	15	intron_retention	FALSE	canonical	3	389	junction_16	201.783223127698	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTGTTTTTAATAAGC	9807	False	NA	NA	False	ATTAAA	-23	NA	120394302	120340804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.133	chr2	-	5828	17	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-12	8157	-5	3874	5prime_fragment	FALSE	canonical	3	679	junction_12	173.003928784869	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTGATATATACATAG	9809	False	NA	NA	False	AATAAA	-23	NA	120394300	120345457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.134	chr2	-	3249	10	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-1	1283	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_5	348.958768656445	1078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGTCTCACTAAAGTG	9784	False	NA	NA	False	AATAAA	-5	NA	120394325	120355460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362183_120365912_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.135	chr2	-	4455	10	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-73	19432	-37	11	5prime_fragment	FALSE	canonical	3	679	junction_5	193.010522325585	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCCTGACTTTCTTGG	9748	False	NA	8	True	AATAAA	-29	NA	120394361	120356732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.136	chr2	-	4317	9	NIC	ENSMUSG00000027288.17	novel	4375	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_8	351.404592314898	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9790	False	NA	-3	True	AATAAA	-43	NA	120394319	120356743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120394167
ES.19887.139	chr2	-	2036	8	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	389	junction_5	258.657365356298	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTTTCATTGTTCCC	9788	False	NA	-4	True	AATAAA	-42	NA	120394321	120356744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.14	chr2	-	10161	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	27	-2	intron_retention	TRUE	non_canonical	0	0	junction_17	278.326290187477	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9848	False	NA	-8	True	AATAAA	-19	NA	120394261	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120363145_120363327_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.141	chr2	-	4316	9	NIC	ENSMUSG00000027288.17	novel	4375	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	2	15	junction_7	364.288669018129	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTTTCATTGTTCCC	9813	False	NA	-4	True	AATAAA	-42	NA	120394296	120356744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120385711_120385797_120394167
ES.19887.142	chr2	-	4618	10	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	352.056427856475	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTTTCATTGTTCCC	9999	False	NA	-4	True	AATAAA	-42	NA	120394110	120356744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120393741
ES.19887.143	chr2	-	4204	9	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	370.86520462292	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAAGTTTCATTGTTC	9787	False	NA	-6	True	AATAAA	-40	NA	120394322	120356746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120376323_120376386_120385711_120385797_120394167
ES.19887.144	chr2	-	1972	7	NIC	ENSMUSG00000027288.17	novel	4375	10	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	3	47	junction_5	393.433497133463	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAAGTTTCATTGTTC	9788	False	NA	-6	True	AATAAA	-40	NA	120394321	120356746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120385711_120385797_120394167
ES.19887.147	chr2	-	3270	7	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-17	intron_retention	FALSE	canonical	3	389	junction_4	279.122683102291	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTAGAGAATTCATTT	9790	False	NA	-20	True	AATAAA	-26	NA	120394319	120356760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.148	chr2	-	5454	10	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	356.2036801163	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTAGAGAATTCATTT	9826	False	NA	-20	True	AATAAA	-26	NA	120394283	120356760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120363145_120363327_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.149	chr2	-	4157	10	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-31	19688	-4	219	5prime_fragment	FALSE	canonical	3	679	junction_5	193.010522325585	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTTTCCACTGACAGA	9790	False	NA	NA	False	NA	NA	NA	120394319	120356988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.150	chr2	-	4415	6	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-8	1428	intron_retention	FALSE	canonical	3	679	junction_1	210.124153775809	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAAAGGTATGGCTAT	9806	False	NA	NA	False	AATAAA	-16	NA	120394303	120360938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.151	chr2	-	3004	5	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-31	26353	-4	-1287	5prime_fragment	FALSE	canonical	3	681	junction_1	204.702680734767	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGCTTGCTTTTTGG	9790	False	NA	NA	False	NA	NA	NA	120394319	120363653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.152	chr2	-	2764	5	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-23	26585	4	-1519	5prime_fragment	FALSE	canonical	3	681	junction_1	204.702680734767	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATTGTAGATGTCTGC	9798	False	NA	NA	False	ATTAAA	-42	NA	120394311	120363885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.153	chr2	-	2749	5	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	-1524	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	414.981324881012	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACCCATTGTAGATG	9794	False	NA	NA	False	ATTAAA	-37	NA	120394315	120363890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394181
ES.19887.154	chr2	-	474	4	ISM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-12	32479	-5	-3879	5prime_fragment	FALSE	canonical	3	793	junction_1	163.709091582192	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAAGTTGGTTTGTTT	9809	False	NA	71	True	AATACA	-18	NA	120394300	120369779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.17	chr2	-	9050	24	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	13	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	393.714730769567	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9834	False	NA	-8	True	AATAAA	-19	NA	120394275	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340186_120340315_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120383770_120383881_120385711_120385797_120394167
ES.19887.18	chr2	-	4793	12	NNC	ENSMUSG00000027288.17	novel	6391	19	NA	NA	227	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	347.449526627565	1212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	616	False	NA	-8	True	AATAAA	-19	NA	120354873	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345982_120346563_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345
ES.19887.19	chr2	-	11903	18	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	51	junction_17	287.580829618412	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9814	False	NA	-8	True	AATAAA	-19	NA	120394295	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120341115_120343183_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.2	chr2	-	7563	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	8	826	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCGGTTTATGCTTT	9802	False	NA	NA	False	NA	NA	NA	120394307	120336474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.21	chr2	-	9120	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	287.605794396639	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9790	False	NA	-8	True	AATAAA	-19	NA	120394319	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355112_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.22	chr2	-	9157	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	402.285690597496	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9799	False	NA	-8	True	AATAAA	-19	NA	120394310	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376387_120385711_120385797_120393741_120393793_120394167
ES.19887.23	chr2	-	9234	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	5	junction_21	348.223594099543	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9780	False	NA	-8	True	AATAAA	-19	NA	120394329	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120383770_120383881_120385711_120385797_120394167
ES.19887.28	chr2	-	8845	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_18	285.74509687449	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9799	False	NA	-8	True	AATAAA	-19	NA	120394310	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120385711_120385797_120394167
ES.19887.3	chr2	-	9159	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-74	0	-38	0	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9747	False	NA	-6	True	AATAAA	-21	NA	120394362	120337300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.30	chr2	-	9149	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	51	junction_21	279.463682995445	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTATTTGTCTGCA	9749	False	NA	-8	True	AATAAA	-19	NA	120394360	120337302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.36	chr2	-	6946	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-3	intron_retention	FALSE	canonical	3	44	junction_17	264.832022232962	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTATTTGTCTGC	9788	False	NA	-9	True	AATAAA	-18	NA	120394321	120337303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.4	chr2	-	6681	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	47	junction_17	270.152951647674	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9796	False	NA	-6	True	AATAAA	-21	NA	120394313	120337300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120385711_120385797_120394167
ES.19887.40	chr2	-	7568	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	389	junction_16	198.669812614913	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9809	False	NA	-10	True	AATAAA	-17	NA	120394300	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.41	chr2	-	9103	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-4	intron_retention	FALSE	canonical	2	23	junction_19	280.122138893756	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9790	False	NA	-10	True	AATAAA	-17	NA	120394319	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369965_120376323_120376386_120385711_120385797_120394167
ES.19887.44	chr2	-	8990	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-2	-4	intron_retention	FALSE	canonical	1	2	junction_4	281.588352031827	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9792	False	NA	-10	True	AATAAA	-17	NA	120394317	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.45	chr2	-	5308	12	NIC	ENSMUSG00000027288.17	novel	6391	19	NA	NA	1583	-4	intron_retention	FALSE	canonical	0	0	junction_3	341.697585109145	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	NA	False	NA	-10	True	AATAAA	-17	NA	120357413	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229
ES.19887.48	chr2	-	9272	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_14	400.097304796952	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9794	False	NA	-10	True	AATAAA	-17	NA	120394315	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358551_120358722_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.49	chr2	-	6686	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-20	-4	intron_retention	FALSE	canonical	0	0	junction_2	310.263617695298	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9765	False	NA	-10	True	AATAAA	-17	NA	120394344	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341031_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.5	chr2	-	8929	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-6	0	intron_retention	FALSE	canonical	3	17	junction_18	276.617511195513	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9779	False	NA	-6	True	AATAAA	-21	NA	120394330	120337300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120376323_120376386_120385711_120385797_120394167
ES.19887.50	chr2	-	9094	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	-4	intron_retention	FALSE	canonical	3	16	junction_21	285.275885882	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTTATTTGTCTG	9794	False	NA	-10	True	AATAAA	-17	NA	120394315	120337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394181
ES.19887.57	chr2	-	9094	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	6	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	281.22553307535	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9800	False	NA	-12	True	AATAAA	-15	NA	120394309	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345928_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.60	chr2	-	9075	23	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-5	-6	intron_retention	FALSE	non_canonical	0	0	junction_18	281.966661765372	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9780	False	NA	-12	True	AATAAA	-15	NA	120394329	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120364845_120364889_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.61	chr2	-	6047	18	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_16	288.108219287061	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9796	False	NA	-12	True	AATAAA	-15	NA	120394313	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120385711_120385797_120394167
ES.19887.63	chr2	-	9116	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-9	-6	intron_retention	FALSE	non_canonical	0	0	junction_13	288.601153584562	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9805	False	NA	-12	True	AATAAA	-15	NA	120394304	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357587_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.65	chr2	-	7197	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	389	junction_16	197.221604067889	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9790	False	NA	-12	True	AATAAA	-15	NA	120394319	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.66	chr2	-	10406	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	679	junction_15	175.23034306362	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9790	False	NA	-12	True	AATAAA	-15	NA	120394319	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.67	chr2	-	6752	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_11	312.375173961503	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9787	False	NA	-12	True	AATAAA	-15	NA	120394322	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354339_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.68	chr2	-	6711	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	7	-6	intron_retention	FALSE	non_canonical	0	0	junction_12	312.132740425335	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTTGTTATTTGTC	9828	False	NA	-12	True	AATAAA	-15	NA	120394281	120337306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355112_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.72	chr2	-	6094	19	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_16	360.151858402967	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCATTTTGTTATTTGT	9797	False	NA	-13	True	AATAAA	-14	NA	120394312	120337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362183_120376323_120376386_120385711_120385797_120394167
ES.19887.73	chr2	-	9161	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	1	-7	intron_retention	FALSE	canonical	3	679	junction_16	177.506866064386	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCATTTTGTTATTTGT	9815	False	NA	-13	True	AATAAA	-14	NA	120394294	120337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.75	chr2	-	6853	21	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	-9	intron_retention	FALSE	canonical	3	5	junction_19	374.479675683474	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCATTTTGTTATTT	9787	False	NA	-15	True	AATAAA	-12	NA	120394322	120337309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120383770_120383881_120385711_120385797_120394167
ES.19887.79	chr2	-	9101	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	2	-9	intron_retention	FALSE	non_canonical	0	0	junction_12	352.278073785243	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCATTTTGTTATTT	9796	False	NA	-15	True	AATAAA	-12	NA	120394313	120337309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355112_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.80	chr2	-	5957	17	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-1	-9	intron_retention	FALSE	canonical	0	0	junction_15	296.724349933992	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCATTTTGTTATTT	9813	False	NA	-15	True	AATAAA	-12	NA	120394296	120337309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120385711_120385797_120394167
ES.19887.81	chr2	-	9093	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-9	intron_retention	FALSE	non_canonical	0	0	junction_21	287.958078329613	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCATTTTGTTATTT	9810	False	NA	-15	True	AATAAA	-12	NA	120394299	120337309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394161
ES.19887.82	chr2	-	6620	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	-9	intron_retention	FALSE	canonical	1	2	junction_4	308.354273563204	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCATTTTGTTATTT	9790	False	NA	-15	True	AATAAA	-12	NA	120394319	120337309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.86	chr2	-	7130	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-6	-10	intron_retention	FALSE	canonical	3	389	junction_16	198.2178390771	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTCATTTTGTTATT	9808	False	NA	-16	True	AATAAA	-11	NA	120394301	120337310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.87	chr2	-	6386	19	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-7	-10	intron_retention	FALSE	canonical	0	0	junction_12	320.682951769432	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTCATTTTGTTATT	9807	False	NA	-16	True	AATAAA	-11	NA	120394302	120337310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.88	chr2	-	8945	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	100	-10	intron_retention	FALSE	non_canonical	0	0	junction_1	288.44019489618	1347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTCATTTTGTTATT	9921	False	NA	-16	True	AATAAA	-11	NA	120394188	120337310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340594_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.9	chr2	-	9031	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	14	junction_20	290.673059467161	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9790	False	NA	-6	True	AATAAA	-21	NA	120394319	120337300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120394167
ES.19887.92	chr2	-	8149	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	-51	987	-15	-987	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACATTTTGACACATT	9770	False	NA	NA	False	AATAAA	-44	NA	120394339	120338287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.93	chr2	-	5765	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-21	-1010	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGTTTTTACTAGG	9764	False	NA	NA	False	AATAAA	-21	NA	120394345	120338310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19887.94	chr2	-	8087	22	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	8	-1010	intron_retention	FALSE	non_canonical	0	0	junction_17	347.848508741972	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGTTTTTACTAGG	9802	False	NA	NA	False	AATAAA	-21	NA	120394307	120338310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362701_120363989_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394173
ES.19887.98	chr2	-	5952	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	-15	-1015	intron_retention	FALSE	canonical	3	44	junction_17	264.832022232962	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTTGAAAGTTTTTA	9770	False	NA	NA	False	AATAAA	-16	NA	120394339	120338315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ES.19887.99	chr2	-	4561	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	4	614	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAATGCTTTGTTTCTAG	9798	False	NA	NA	False	NA	NA	NA	120394311	120339480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ES.19888.1	chr2	+	2753	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	-31	1	-31	-1	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGACCAGTAATGCC	NA	False	NA	9	True	NA	NA	NA	120398120	120431735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.10	chr2	+	1913	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-20	765	0	-765	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGTAATGTTTCTATG	NA	False	NA	16	True	ATTAAA	-28	NA	120398151	120430971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.11	chr2	+	3469	9	NNC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	0	1756	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.116451642916	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGATGCTCTTAAT	NA	False	NA	8	True	AATAAA	-24	NA	120398151	120433492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756_120431318_120432327
ES.19888.12	chr2	+	4479	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	0	-1756	0	1756	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGATGCTCTTAAT	NA	False	NA	8	True	AATAAA	-24	NA	120398151	120433492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.13	chr2	+	1209	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	1	1513	1	-1513	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAGACGAGTGCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	120398152	120430223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.14	chr2	+	2278	10	NNC	ENSMUSG00000027287.15	novel	2730	9	NA	NA	1	-668	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	179.174513178743	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAAGCTGTATTAGCT	NA	False	NA	22	True	AATAAA	-27	NA	120398152	120431068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120399763_120399864_120400251_120400376_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.15	chr2	+	625	6	NNC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	1	2945	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	149.756602525565	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGGTTTTGATTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	120398152	120419693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120419509
ES.19888.16	chr2	+	2957	9	NNC	ENSMUSG00000027287.15	novel	2730	9	NA	NA	1	1756	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.116451642916	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGATGCTCTTAAT	NA	False	NA	8	True	AATAAA	-24	NA	120398152	120433492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756_120431237_120432757
ES.19888.17	chr2	+	2673	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-17	2	3	-2	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACAGACCAGTAATGC	NA	False	NA	8	True	NA	NA	NA	120398154	120431734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.18	chr2	+	1937	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	6	780	6	-780	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTGTTCTTTCAAATA	NA	False	NA	1	True	ATTAAA	-13	NA	120398157	120430956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.19	chr2	+	2988	9	NNC	ENSMUSG00000027287.15	novel	2730	9	NA	NA	-1	1753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.116451642916	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCCTGGATGCTCTT	NA	False	NA	5	True	AATAAA	-21	NA	120398170	120433489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756_120431292_120432760
ES.19888.2	chr2	+	2086	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	-26	663	-26	-663	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTATTAGCTCTCTT	NA	False	NA	27	True	AATAAA	-32	NA	120398125	120431073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.20	chr2	+	2116	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	5	537	-1	-537	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGAATTACAAGTCACT	NA	False	NA	153	True	AATACA	-17	NA	120398176	120431199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.21	chr2	+	2150	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	36	537	10	-537	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGAATTACAAGTCACT	NA	False	NA	153	True	AATACA	-17	NA	120398187	120431199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.22	chr2	+	2378	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	36	309	10	-309	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	120398187	120431427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.23	chr2	+	3376	9	NNC	ENSMUSG00000027287.15	novel	2730	9	NA	NA	10	1753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.116451642916	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCCTGGATGCTCTT	NA	False	NA	5	True	AATAAA	-21	NA	120398187	120433489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756_120431292_120432355
ES.19888.24	chr2	+	1687	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	36	1000	10	-1000	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTATGCCTTTATATT	NA	False	NA	NA	False	AAAAAG	-28	NA	120398187	120430736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.25	chr2	+	2662	8	NNC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	133.653527099446	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGACCAGTAATGCC	NA	False	NA	9	True	NA	NA	NA	120398204	120431735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416751_120425281_120425438_120427123_120427269_120429756
ES.19888.26	chr2	+	2609	7	NIC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	142.411375950097	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTCACAGACCAGTAAT	NA	False	NA	6	True	NA	NA	NA	120398212	120431732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.27	chr2	+	206	1	Intergenic	novelGene_16487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCCTAAGTTTAGAAAGC	141	False	NA	NA	False	NA	NA	NA	120406253	120406459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120406300_120406500
ES.19888.28	chr2	+	1896	1	Intergenic	novelGene_16488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	123	False	NA	NA	False	NA	NA	NA	120411610	120413506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120411600_120413500
ES.19888.29	chr2	+	2631	7	ISM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	15755	779	-2795	-779	3prime_fragment	FALSE	canonical	3	373	junction_3	8.00867585115598	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGTTCTTTCAAATAG	2439	False	NA	2	True	ATTAAA	-14	NA	120413926	120430957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.3	chr2	+	871	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	-20	1872	-20	-1872	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCTGAGTCATTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	120398131	120429864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.30	chr2	+	2725	5	NNC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	-83	1794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	165.9352283272	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGGTTCCTAATTTAT	5151	False	NA	46	True	ATTAAA	-15	NA	120416638	120433530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120416758_120425281_120425438_120427123_120427269_120429756_120431292_120432760
ES.19888.31	chr2	+	7306	3	ISM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	20577	1508	2027	-1508	3prime_fragment	FALSE	canonical	3	374	junction_2	11.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACGAGTGCTTGGGGT	7261	False	NA	NA	False	ATTAAA	-21	NA	120418748	120430228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_120425438_120427123_120427269_120429756
ES.19888.4	chr2	+	3161	1	Genic_Genomic	ENSMUSG00000027287.15	novel	NA	NA	NA	NA	-9	-14153	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAACATATAAAAGTTAAGT	NA	False	NA	NA	False	AAAAAG	-20	NA	120398142	120401303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_120398100_120401300
ES.19888.5	chr2	+	2064	9	NIC	ENSMUSG00000027287.15	novel	2730	9	NA	NA	-5	-764	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	162.262711366475	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTAATGTTTCTATGA	NA	False	NA	17	True	ATTAAA	-29	NA	120398146	120430972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120398288_120399763_120399864_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ES.19888.7	chr2	+	2081	8	NNC	ENSMUSG00000027287.15	novel	2723	8	NA	NA	-1	-668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	172.927494538454	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAAGCTGTATTAGCT	NA	False	NA	22	True	AATAAA	-27	NA	120398150	120431068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120420955_120421099_120425281_120425438_120427123_120427269_120429756
ES.19889.1	chr2	-	3468	1	Antisense	novelGene_ENSMUSG00000027287.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGGGTTGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	120421707	120418239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_120418200_120421700
ES.19889.2	chr2	-	3233	1	Antisense	novelGene_ENSMUSG00000027287.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120421707	120418474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_120418500_120421700
ES.1989.1	chr1	+	171	1	ISM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	65584	4015	-2987	2385	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	178080681	178080852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_178080700_178080900
ES.19890.1	chr2	-	4064	4	NIC	ENSMUSG00000027286.17	novel	1961	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	29	junction_3	73.4347783183599	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439834	120434718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120435740_120436428_120439293_120439398_120439505_120439761
ES.19890.12	chr2	-	1884	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	-40	4	0	-4	multi-exon	FALSE	canonical	1	2	junction_5	68.2800117164606	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTTGTCTGGAAGTAA	NA	False	NA	NA	False	AATAAA	-11	NA	120439836	120434722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
ES.19890.13	chr2	-	3571	5	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	64	junction_4	49.4943178556893	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTGTCTGGAAGT	NA	False	NA	NA	False	AATAAA	-9	NA	120439786	120434724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120435740_120436428_120438549_120439153_120439293_120439398_120439505_120439595
ES.19890.2	chr2	-	3466	5	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	76.1688092331763	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439834	120434718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120435740_120436428_120438549_120439153_120439293_120439398_120439505_120439754
ES.19890.3	chr2	-	1962	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	-1	1	-1	-1	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTCTGGAAGTAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	120439837	120434719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
ES.19890.4	chr2	-	1808	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	151	2	-14	-2	multi-exon	FALSE	canonical	3	29	junction_5	57.8321709777525	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439850	120434720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
ES.19890.5	chr2	-	1752	6	NNC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.420830822204	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439835	120434720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439201_120439293_120439398_120439505_120439754
ES.19890.6	chr2	-	1878	6	NNC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.0582362937253	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439771	120434720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439612
ES.19890.7	chr2	-	1801	6	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	69.0582362937253	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439836	120434720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439754
ES.19890.8	chr2	-	1979	6	NNC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.0582362937253	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTCTGGAAGTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	120439835	120434720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439525_120439595
ES.19890.9	chr2	-	2513	5	NIC	ENSMUSG00000027286.17	novel	1962	6	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	64	junction_4	49.7945780180935	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTGTCTGGAAGTAAT	NA	False	NA	NA	False	AATAAA	-12	NA	120439785	120434721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120435740_120436428_120436615_120438279_120439293_120439398_120439505_120439595
ES.19891.1	chr2	+	3157	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	-3	0	-3	0	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439860	120452041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ES.19891.10	chr2	+	4982	5	NIC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	57	0	intron_retention	FALSE	canonical	3	158	junction_2	51.0489960724009	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439920	120452041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120448463_120449455
ES.19891.11	chr2	+	3056	6	FSM	ENSMUSG00000027285.14	ENSMUST00000110706.2	3055	6	-8	7	-8	-7	multi-exon	FALSE	canonical	1	2	junction_1	110.188202635309	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAATGTGGCTCCAATA	NA	False	NA	NA	False	AATAAA	-9	NA	120440067	120452034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440140_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ES.19891.2	chr2	+	812	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	24	2318	24	-664	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGATATTGATAGTTTT	NA	False	NA	32	True	NA	NA	NA	120439887	120449723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ES.19891.3	chr2	+	2911	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	24	219	24	-219	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAGGTTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	120439887	120451822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ES.19891.4	chr2	+	2958	4	NIC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	30	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	136.826735529119	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGGCTCCAATATGAA	NA	False	NA	NA	False	AATAAA	-13	NA	120439893	120452038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120440027_120446335_120446469_120448353_120448463_120449455
ES.19891.5	chr2	+	3054	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	30	-1654	30	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439893	120452041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ES.19891.6	chr2	+	1352	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	43	1759	43	-105	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAGATTAACTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	120439906	120450282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ES.19891.7	chr2	+	2816	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	49	-1435	49	-219	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAGGTTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	120439912	120451822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ES.19891.8	chr2	+	2677	4	NIC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	55	-219	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	127.791496848056	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAGGTTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	120439918	120451822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120440027_120442818_120442912_120448353_120448463_120449455
ES.19891.9	chr2	+	2976	5	NNC	ENSMUSG00000027285.14	novel	3154	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	137.470678691858	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439918	120452041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120440027_120442871_120442912_120446335_120446469_120448353_120448463_120449455
ES.19892.1	chr2	-	173	1	Intergenic	novelGene_16489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	120481746	120481573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120481600_120481700
ES.19893.1	chr2	-	1004	2	Antisense	novelGene_ENSMUSG00000033705.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACAAAGAGAAGCCCAA	9282	False	NA	NA	False	NA	NA	NA	120525613	120524405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_120524854_120525057
ES.19894.1	chr2	+	9672	11	ISM	ENSMUSG00000033705.18	ENSMUST00000154193.8	5377	13	-6042	15957	-2791	57	5prime_fragment	FALSE	canonical	1	3	junction_3	3.71618083521241	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTCCCTGCCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	120529030	120546419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
ES.19894.2	chr2	+	5928	11	ISM	ENSMUSG00000033705.18	ENSMUST00000154193.8	5377	13	-3097	16756	154	-693	5prime_fragment	FALSE	canonical	1	3	junction_3	3.71618083521241	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCCGAATTCTCT	NA	False	NA	NA	False	TTTAAA	-25	NA	120531975	120545620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
ES.19894.3	chr2	+	3331	11	ISM	ENSMUSG00000033705.18	ENSMUST00000154193.8	5377	13	466	15790	466	23	5prime_fragment	FALSE	canonical	1	3	junction_3	3.71618083521241	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATATTACTCGTAAA	NA	False	NA	NA	False	NA	NA	NA	120535538	120546586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
ES.19894.4	chr2	+	2639	10	NIC	ENSMUSG00000033705.18	novel	5377	13	NA	NA	682	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	4.54062594260057	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTCTATTGCAAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	120535754	120546313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120544227_120544308_120544485_120544645_120545045
ES.19894.5	chr2	+	3593	5	NIC	ENSMUSG00000033705.18	novel	4874	11	NA	NA	-3057	-694	intron_retention	FALSE	canonical	2	4	junction_1	2.9474565306379	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACTCCGAATTCTC	NA	False	NA	NA	False	TTTAAA	-24	NA	120541143	120545619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
ES.19895.1	chr2	+	2781	1	Antisense	novelGene_ENSMUSG00000027284.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120549500	120552281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120549500_120552300
ES.19896.1	chr2	-	7024	25	ISM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	-37	-377	-37	9	intron_retention	TRUE	canonical	3	45	junction_16	13.3811642077794	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGGCTTTTTTATTTT	6077	False	NA	NA	False	NA	NA	NA	120562036	120546625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410
ES.19896.10	chr2	-	6423	26	ISM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	-9	-3	-9	3	intron_retention	FALSE	canonical	3	38	junction_25	14.9505852728246	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGCTTGAATATCTT	6105	False	NA	NA	False	NA	NA	NA	120562008	120546999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779
ES.19896.2	chr2	-	6376	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-7	8	combination_of_known_junctions	TRUE	canonical	3	17	junction_26	17.8771144441848	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCTGGCTTTTTTATTT	6107	False	NA	NA	False	NA	NA	NA	120562006	120546626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
ES.19896.25	chr2	-	4154	27	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.2210052483658	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGCTGTTCTCCCTGC	6111	False	NA	NA	False	AATAAA	-16	NA	120562002	120548665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120549409_120549621_120549730_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
ES.19896.42	chr2	-	4213	29	NNC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	20.3593670464141	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATGGCTGTTCTCCCT	6108	False	NA	NA	False	AATAAA	-14	NA	120562005	120548667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560826_120560949_120560987_120561182_120561674_120561892
ES.19896.5	chr2	-	5711	27	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	631	4	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	21.6189430413434	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTACCTGGCTTTTTT	6773	False	NA	NA	False	NA	NA	NA	120561340	120546630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553137_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560987_120561182
ES.19896.51	chr2	-	3620	27	NNC	ENSMUSG00000027284.17	novel	8046	41	NA	NA	-4	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.602508391416	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGATTTGTATCTGC	6110	False	NA	NA	False	AATAAA	-15	NA	120562003	120549564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553137_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554967_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
ES.19896.6	chr2	-	5878	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	1	54	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	19.309123482361	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGCTCTAGAGAGTTG	6116	False	NA	NA	False	NA	NA	NA	120561997	120546948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560987_120561182_120561674_120561892
ES.19896.8	chr2	-	6012	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	-4	15	combination_of_known_junctions	FALSE	canonical	3	17	junction_26	17.8771144441848	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTTTTGATCTATGGT	6110	False	NA	NA	False	AAGAAA	-10	NA	120562003	120546987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
ES.19897.1	chr2	+	990	1	Intergenic	novelGene_16490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTTGTTTGGAGA	3709	False	NA	NA	False	NA	NA	NA	120571415	120572405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120571400_120572400
ES.19898.1	chr2	+	173	1	Intergenic	novelGene_16493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCCTGTTTTGGCTT	5905	False	NA	NA	False	NA	NA	NA	120593675	120593848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120593700_120593800
ES.19899.1	chr2	+	177	1	Intergenic	novelGene_16494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTCTAGCCAGGC	7661	False	NA	NA	False	NA	NA	NA	120602511	120602688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120602500_120602700
ES.199.1	chr1	+	5386	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	-80	-853	-80	0	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGAGTTGATGTTTTC	NA	False	NA	13	True	ATTAAA	-25	NA	24717630	24805382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.11	chr1	+	2463	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	112	1878	3	1177	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGGACTTATTCAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	24717822	24802651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.13	chr1	+	5162	15	NNC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	3	-342	intron_retention	FALSE	non_canonical	0	0	junction_12	40.6609299511189	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTAGGTAGTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	24717822	24805040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783440_24783946_24784052_24785885_24786036_24787878_24787960_24801272_24801365_24801703
ES.199.14	chr1	+	2160	15	NNC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	3	633	intron_retention	FALSE	canonical	0	0	junction_10	40.7936569699211	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACATTCCCTTTGTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	24717822	24802107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783440_24784013_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.16	chr1	+	1591	15	NIC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	4	483	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	36.8751340364219	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCCTGAAGTAGCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	24717823	24801957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_24717898_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.17	chr1	+	7312	16	NNC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	9	635	intron_retention	TRUE	non_canonical	0	0	junction_5	39.3782794048812	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACATTCCCTTTGTTGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	24717828	24802109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24749828_24749897_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.18	chr1	+	4332	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	118	3	9	-3	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTTCGACTAATGAACAG	NA	False	NA	NA	False	CATAAA	-19	NA	24717828	24804526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.20	chr1	+	2034	16	FSM	ENSMUSG00000073725.9	ENSMUST00000095062.10	5228	16	-53	3247	-53	661	multi-exon	FALSE	canonical	1	2	junction_1	38.8979291079729	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAGAAGTCACTTTG	NA	False	NA	NA	False	ATTAAA	-38	NA	24717953	24802135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24718116_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.3	chr1	+	1888	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	-7	2572	-7	483	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCCTGAAGTAGCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	24717703	24801957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.5	chr1	+	1999	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	39	2415	9	640	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCTTTGTTGCTTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	24717749	24802114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.6	chr1	+	4300	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	40	113	10	-113	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGTGTTAAGAAGC	NA	False	NA	NA	False	AATATA	-17	NA	24717750	24804416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.7	chr1	+	4924	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	40	-511	10	-342	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTAGGTAGTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	24717750	24805040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.199.9	chr1	+	2961	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	59	1433	29	-1433	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGAAGTTGTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	24717769	24803096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ES.1990.1	chr1	-	3484	1	Antisense	novelGene_ENSMUSG00000026502.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTATGTATGAGT	NA	False	NA	NA	False	AAAAAG	-6	NA	178084333	178080849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_178080800_178084300
ES.1990.2	chr1	-	2524	2	Antisense	novelGene_ENSMUSG00000026502.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178084023	178080875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_178082742_178083365
ES.19900.1	chr2	-	11103	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-32	-5	-3	5	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTGTGTGATGGTT	NA	False	NA	8	True	AATAAA	-26	NA	120680919	120563291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.10	chr2	-	5267	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	6	5879	6	-5879	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTATTACCTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	120680893	120569175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.11	chr2	-	5238	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-58	5886	-29	-5886	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCAATGTTTTTATTA	NA	False	NA	NA	False	AATAAA	-17	NA	120680945	120569182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.13	chr2	-	4751	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	-48	6449	-31	6406	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTGTGTGTTTAT	NA	False	NA	NA	False	AATATA	-35	NA	120680947	120569745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.14	chr2	-	4813	17	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	3	6406	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	13.9440847673843	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTGTGTGTTTAT	NA	False	NA	NA	False	AATATA	-35	NA	120680913	120569745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120667645_120667742_120680536
ES.19900.15	chr2	-	4648	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	6451	-4	6404	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGGTTTGTGTGTTT	NA	False	NA	NA	False	AATATA	-33	NA	120680920	120569747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.16	chr2	-	6090	14	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-32	9832	-3	3023	5prime_fragment	FALSE	canonical	3	11	junction_13	9.62676249904493	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCATTCTATCACTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	120680919	120573128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.17	chr2	-	6253	16	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	4	3023	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	13.9612161202223	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCATTCTATCACTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	120680912	120573128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120667645_120667742_120680536
ES.19900.18	chr2	-	6159	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-47	-3019	-2	3019	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCCCCATTCTATCAC	NA	False	NA	NA	False	AATAAA	-17	NA	120680918	120573132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.19	chr2	-	6187	15	NIC	ENSMUSG00000090100.8	novel	3093	15	NA	NA	-11	3016	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	13.3510299228187	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATGCCCCATTCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	120680927	120573135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120667645_120667742_120680536
ES.19900.2	chr2	-	11172	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	-20	0	-3	0	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGCTATTTGTGTGA	NA	False	NA	3	True	AATAAA	-21	NA	120680919	120563296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.20	chr2	-	4865	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-48	-1724	-3	1724	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTATCTCTTTACTTT	NA	False	NA	NA	False	TATAAA	-45	NA	120680919	120574427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.21	chr2	-	3516	9	ISM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	66629	-1369	66603	1369	3prime_fragment	FALSE	canonical	3	26	junction_6	7.64750776397121	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGCTTTGTCCTTTTTT	NA	False	NA	NA	False	AAAACA	-16	NA	120614242	120574782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175
ES.19900.22	chr2	-	4011	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	-49	-869	-4	869	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTAAGTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	120680920	120575282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.23	chr2	-	3904	16	NNC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	-4	868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.5934727361263	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGTTAAGTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	120680920	120575283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536_120680726_120680831
ES.19900.24	chr2	-	4032	15	NIC	ENSMUSG00000090100.8	novel	3093	15	NA	NA	-4	868	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	13.3510299228187	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGTTAAGTGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	120680920	120575283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120667645_120667742_120680536
ES.19900.25	chr2	-	3963	14	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-61	11988	-32	867	5prime_fragment	FALSE	canonical	3	11	junction_13	9.62676249904493	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTTAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	120680948	120575284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.26	chr2	-	3834	14	NIC	ENSMUSG00000090100.8	novel	3093	15	NA	NA	0	866	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	12.3235474797319	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATGTTAAGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	120680887	120575285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.27	chr2	-	3637	13	NIC	ENSMUSG00000090100.8	novel	11066	15	NA	NA	53	838	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	12.4152683776425	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAACATAAAAT	NA	False	NA	NA	False	AGTAAA	-37	NA	120680792	120575313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.28	chr2	-	309	1	Intergenic	novelGene_16491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTCCAGAATTTATGAAG	NA	False	NA	NA	False	AATAAA	-38	NA	120578358	120578049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120578000_120578400
ES.19900.29	chr2	-	3204	13	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	14864	-4	-2009	5prime_fragment	FALSE	canonical	3	11	junction_12	9.97044242860979	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTATCTCCGTACACAA	NA	False	NA	NA	False	NA	NA	NA	120680920	120578160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.3	chr2	-	8750	17	NNC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7273082385868	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGCTATTTGTGTGA	NA	False	NA	3	True	AATAAA	-21	NA	120680919	120563296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120567728_120570149_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.30	chr2	-	2031	13	ISM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	10	4411	10	152	5prime_fragment	FALSE	canonical	3	12	junction_11	10.6366765904059	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCATTGAGTTTCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	120680861	120580562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.31	chr2	-	173	1	Intergenic	novelGene_16492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTTCTGATTAA	NA	False	NA	NA	False	NA	NA	NA	120593440	120593267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120593300_120593400
ES.19900.32	chr2	-	176	1	Intergenic	novelGene_16495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120632542	120632366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120632400_120632500
ES.19900.33	chr2	-	1542	3	ISM	ENSMUSG00000090100.8	ENSMUST00000141921.2	850	6	-3	33913	-3	-33913	5prime_fragment	FALSE	canonical	1	1	junction_1	0.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACAGCTCAGTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	120680919	120654733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120655797_120667645_120667742_120680536
ES.19900.4	chr2	-	10963	15	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	12.4279556497701	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTAGTGCTATTTGTG	NA	False	NA	0	True	AATAAA	-18	NA	120680854	120563299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.5	chr2	-	11257	17	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	13.9440847673843	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTTAGTGCTATTTG	NA	False	NA	-2	True	AATAAA	-16	NA	120680913	120563301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120667645_120667742_120680536
ES.19900.6	chr2	-	6136	16	FSM	ENSMUSG00000090100.8	ENSMUST00000085840.11	11152	16	-20	5036	-3	-5036	multi-exon	FALSE	canonical	3	12	junction_14	10.6048207067457	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCATTTGTAATTTCA	NA	False	NA	NA	False	TATAAA	-42	NA	120680919	120568332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19900.7	chr2	-	6031	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-33	5068	-4	-5068	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATATGCTTATATAAATC	NA	False	NA	NA	False	TATAAA	-20	NA	120680920	120568364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ES.19900.8	chr2	-	4467	1	NIC	ENSMUSG00000090100.8	novel	11066	15	NA	NA	108013	-5069	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATATGCTTATATAAAT	NA	False	NA	NA	False	TATAAA	-19	NA	120572832	120568365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120568400_120572800
ES.19900.9	chr2	-	5033	14	NIC	ENSMUSG00000090100.8	novel	11152	16	NA	NA	-6	-5879	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	11.4411279288374	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTATTACCTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	120680905	120569175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ES.19901.1	chr2	+	1337	2	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTATG	9989	False	NA	NA	False	AATAAA	-16	NA	120702990	120706460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120703714_120705846
ES.19901.2	chr2	+	3483	1	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTTCCTAGTGCCTA	9989	False	NA	NA	False	AATAAA	-29	NA	120702990	120706473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120703000_120706500
ES.19902.1	chr2	+	2904	7	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAAACCAAATTCTGGA	NA	False	NA	NA	False	NA	NA	NA	120776312	120783757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120776421_120776752_120776879_120777102_120777165_120778237_120778376_120780519_120780652_120781362_120783180_120783236
ES.19902.2	chr2	+	2563	2	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGCCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	120781130	120783750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_120783180_120783236
ES.19903.1	chr2	+	212	1	Intergenic	novelGene_16496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTATTTTAAAAAAAAT	NA	False	NA	NA	False	AAAACA	-13	NA	120803003	120803215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120803000_120803200
ES.19904.10	chr2	-	5619	48	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.3853548981422	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801094	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120691173_120693216_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.14	chr2	-	7642	47	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	16.5263294538561	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAAGGGACTTC	NA	False	NA	NA	False	AATAAA	-22	NA	120801092	120690764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780645_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.18	chr2	-	7904	48	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	-2799	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	20.2109293678489	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAAAAGGGACTT	NA	False	NA	NA	False	AATAAA	-21	NA	120803995	120690765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120802997_120803178_120803829
ES.19904.19	chr2	-	6934	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	46	788	23	-788	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTGCCCTTTGTTTTT	NA	False	NA	NA	False	AAGAAA	-4	NA	120801150	120691537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.2	chr2	-	7784	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	-19	3	-19	-3	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801215	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.20	chr2	-	6390	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	28	1350	5	954	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGTAATCAGGTGTGTG	NA	False	NA	NA	False	TATAAA	-17	NA	120801168	120692099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.22	chr2	-	5873	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	31	1864	8	440	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTCTTCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	120801165	120692613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.23	chr2	-	5663	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	17	2088	-6	216	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCCTAGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	120801179	120692837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.25	chr2	-	5524	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	26	2218	3	86	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATCAAACATAAGCTTCA	NA	False	NA	NA	False	AATAAA	-28	NA	120801170	120692967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.26	chr2	-	5377	46	NIC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	-18	75	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	16.3294175200223	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTTTCAATTATCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	120801112	120692978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120693273_120694798_120694901_120696870_120697042_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.27	chr2	-	7428	46	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	0	-16	intron_retention	FALSE	canonical	0	0	junction_13	16.5034078037175	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAGAACTTTCTGAGGAC	NA	False	NA	NA	False	AATAAA	-16	NA	120801094	120693069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726972_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.28	chr2	-	5397	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	50	2321	27	-17	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGAACTTTCTGAGGA	NA	False	NA	NA	False	AATAAA	-15	NA	120801146	120693070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.3	chr2	-	6692	5	ISM	ENSMUSG00000027272.6	ENSMUST00000153868.2	822	6	-3283	-2301	-3283	-3	intron_retention	FALSE	canonical	3	95	junction_2	8.1700673191841	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120705290	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469
ES.19904.30	chr2	-	5598	48	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	-2816	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	20.2109293678489	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTCTAGAGAACTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	120804012	120693076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120802997_120803178_120803841
ES.19904.31	chr2	-	5169	41	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	2	-1773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	16.1213367932067	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGGTGGCAAGCAACT	NA	False	NA	NA	False	AATAAA	-13	NA	120801092	120705303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734683_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.32	chr2	-	5155	35	NIC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	0	9661	intron_retention	FALSE	canonical	3	63	junction_7	8.43769143061067	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGCTTTACAAAATTTT	NA	False	NA	NA	False	TATAAA	-35	NA	120801094	120722413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.33	chr2	-	1734	11	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	54208	35808	-1484	5517	internal_fragment	FALSE	canonical	3	63	junction_5	9.20054346220918	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTATGTATATAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	120746988	120726557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904
ES.19904.34	chr2	-	3549	29	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	-15	46372	-15	-5047	5prime_fragment	FALSE	canonical	3	63	junction_1	8.50472557716339	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTTTGTCGGCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	120801211	120737121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.35	chr2	-	2549	21	NNC	ENSMUSG00000027272.6	novel	1480	9	NA	NA	4	-1839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.3014162067576	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTCTTTGTGAAATGT	NA	False	NA	NA	False	AATAAA	-8	NA	120801192	120753754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120753941_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.36	chr2	-	1668	12	ISM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	98	80484	-4	4705	5prime_fragment	FALSE	canonical	3	79	junction_8	6.58447962262975	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAACTTGTGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	120801098	120771233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.37	chr2	-	2550	8	NIC	ENSMUSG00000027272.6	novel	1480	9	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	79	junction_4	7.55388803794416	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120801101	120775948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120776423_120776754_120776879_120777102_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.4	chr2	-	7616	46	NIC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	29	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	16.3932235322336	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801144	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.5	chr2	-	9380	46	NIC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	27	-3	intron_retention	FALSE	canonical	3	63	junction_18	10.3653268158799	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801146	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120693273_120694798_120694901_120696870_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.7	chr2	-	7655	46	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.9319087810054	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801146	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725644_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19904.8	chr2	-	7356	45	NNC	ENSMUSG00000027272.6	novel	7768	47	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.478559939143	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTTCTCATGTTTGGGC	NA	False	NA	NA	False	AATAAA	-34	NA	120801109	120690752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120693273_120694798_120694901_120696870_120697043_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712707_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120734547_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ES.19905.1	chr2	+	2895	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	23	3	23	-3	multi-exon	FALSE	canonical	2	3	junction_2	3.93136379667097	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGATCTGCAATGTTGA	NA	False	NA	NA	False	AAGAAA	-7	NA	120807520	120838330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ES.19905.2	chr2	+	6017	13	NIC	ENSMUSG00000054484.15	novel	2921	14	NA	NA	162	0	intron_retention	FALSE	canonical	0	0	junction_6	4.06885187191123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCTGCAATGTTGATAA	NA	False	NA	NA	False	AAGAAA	-10	NA	120807659	120838333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817396_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120833083_120835162_120835282_120837299
ES.19905.3	chr2	+	2595	14	NNC	ENSMUSG00000054484.15	novel	2921	14	NA	NA	-215	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.49983563144913	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGAAATATCACAAAC	NA	False	NA	NA	False	NA	NA	NA	120807798	120838314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817069_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ES.19905.4	chr2	+	2549	13	FSM	ENSMUSG00000054484.15	ENSMUST00000110686.3	2417	13	33	-165	33	-43	multi-exon	FALSE	canonical	2	3	junction_1	3.91843931516958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAAAAGATAAG	NA	False	NA	NA	False	NA	NA	NA	120808046	120838290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ES.19906.1	chr2	-	218	1	Intergenic	novelGene_16497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAATGGAAATGATTATC	NA	False	NA	NA	False	AATAAA	-35	NA	120818226	120818008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120818000_120818200
ES.19907.1	chr2	-	157	1	Intergenic	novelGene_16498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	120818590	120818433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120818400_120818600
ES.19908.1	chr2	+	1604	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	-38	3	-38	-3	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAATGTGTCCTCTGA	NA	False	NA	18	True	AATAAA	-27	NA	120838845	120847382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ES.19908.2	chr2	+	1652	10	NIC	ENSMUSG00000023572.17	novel	1632	10	NA	NA	-5	-13	intron_retention	FALSE	canonical	1	4	junction_4	56.4002451618873	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGTGTCATTTAATG	NA	False	NA	8	True	AATAAA	-17	NA	120838923	120847372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842040_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ES.19908.3	chr2	+	1449	10	NIC	ENSMUSG00000023572.17	novel	1569	11	NA	NA	-1	-15	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	55.1928157786885	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAAATGTGTCATTTAA	NA	False	NA	6	True	AATAAA	-15	NA	120838927	120847370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120846611_120846659_120846879
ES.19908.4	chr2	+	6110	6	NIC	ENSMUSG00000023572.17	novel	1632	10	NA	NA	0	-15	intron_retention	FALSE	canonical	3	138	junction_2	19.6814633602281	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAAATGTGTCATTTAA	NA	False	NA	6	True	AATAAA	-15	NA	120838928	120847370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120839259_120839523_120842238_120842833_120842911_120843179_120843458_120844438_120846659_120846879
ES.19908.5	chr2	+	1489	11	NNC	ENSMUSG00000023572.17	novel	1569	11	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	54.402573468541	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGTGTCATTTAATG	NA	False	NA	8	True	AATAAA	-17	NA	120838930	120847372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844488_120846619_120846659_120846879
ES.19908.6	chr2	+	1604	10	FSM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	15	13	-4	-13	multi-exon	FALSE	canonical	3	138	junction_5	15.8464857653396	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGTGTCATTTAATG	NA	False	NA	8	True	AATAAA	-17	NA	120838943	120847372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ES.19908.7	chr2	+	6856	3	NIC	ENSMUSG00000023572.17	novel	1632	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	138	junction_1	28.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGTGTCCTCTGAAG	NA	False	NA	20	True	AATAAA	-29	NA	120838951	120847384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120842238_120842833_120843458_120844438
ES.19909.1	chr2	+	157	1	Intergenic	novelGene_16499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGATTCACT	NA	False	NA	NA	False	NA	NA	NA	120881743	120881900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_120881700_120881900
ES.1991.1	chr1	+	175	1	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCACTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	178087015	178087190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178087000_178087200
ES.19910.1	chr2	-	179	1	Intergenic	novelGene_16500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAGCAGAGACCAAGC	NA	False	NA	NA	False	NA	NA	NA	120956932	120956753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_120956800_120956900
ES.19911.1	chr2	+	2707	12	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6457127776171	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970887	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973704_120975169_120975258_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.10	chr2	+	5614	12	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-2	2934	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	41.9692921980262	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAGA	-14	NA	120970922	120990095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120975169_120975258_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.11	chr2	+	3510	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-2	918	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAAAATGATTTTTTTT	NA	False	NA	NA	False	GATAAA	-2	NA	120970922	120988079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.12	chr2	+	1596	12	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	0	2759	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.7629338591974	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTATGTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	120970924	120989920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815_120986062_120989757
ES.19911.13	chr2	+	2519	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	41.6390441773103	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970930	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973704_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.14	chr2	+	2479	10	NIC	ENSMUSG00000027259.16	novel	2298	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.8558017798469	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970932	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.15	chr2	+	3454	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-45	-932	0	930	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	GATAAA	-14	NA	120970933	120988091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.16	chr2	+	3574	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	7	1082	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	37.8558017798469	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATGTATATATTCAGT	NA	False	NA	NA	False	AATAAA	-14	NA	120970940	120988243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.17	chr2	+	2395	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	43.8079422304807	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970953	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.18	chr2	+	4604	27	Fusion	ENSMUSG00000027259.16_ENSMUSG00000027263.13	novel	2477	11	NA	NA	20	-635	multi-exon	FALSE	non_canonical	0	0	junction_11	87.3438505268234	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTTTGTTTGCTGTA	NA	False	NA	18	True	AATAAA	-19	NA	120970953	121028615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815_120986014_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121018612_121018664_121019005_121019112_121019842_121019951_121020301_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.19	chr2	+	2467	11	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	52.0408493397254	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970975	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120975169_120975258_120976513_120976602_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.2	chr2	+	2544	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	-86	19	-16	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970892	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.21	chr2	+	5220	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	18	-2761	-5	2759	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTATGTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	120970996	120989920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.22	chr2	+	4410	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	76	junction_1	17.0554650739547	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATGCTTGAATTGCT	NA	False	NA	NA	False	NA	NA	NA	120970996	120987156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.23	chr2	+	5105	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	19	2756	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	43.8079422304807	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATTTGTGCCTATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	120971020	120989917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.24	chr2	+	2560	12	NNC	ENSMUSG00000027259.16	novel	2298	10	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	42.0699928395604	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120971234	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971364_120971717_120971803_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.25	chr2	+	1459	12	NNC	ENSMUSG00000027259.16	novel	2298	10	NA	NA	236	-28	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	42.0699928395604	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGATCTTCCTGCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	120971237	120986042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971364_120971717_120971803_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.26	chr2	+	2426	11	NNC	ENSMUSG00000027259.16	novel	2298	10	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	49.7695690156143	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120971237	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971364_120971717_120971803_120972573_120972785_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.27	chr2	+	1368	11	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	110	2081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.2816758157613	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGTTATTCCATGTC	1081	False	NA	NA	False	AATAAA	-5	NA	120972731	120989242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815_120986062_120988983
ES.19911.28	chr2	+	5300	3	NIC	ENSMUSG00000027259.16	novel	2471	10	NA	NA	3802	-1443	intron_retention	FALSE	canonical	3	104	junction_1	13	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGTGTTAGGCCGGGC	4773	False	NA	NA	False	NA	NA	NA	120976423	120984627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120976602_120978721_120980828_120981611
ES.19911.3	chr2	+	2628	12	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	45.0380922338648	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970896	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120975169_120975258_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.30	chr2	+	3145	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-47	1108	0	613	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCAATTTAGCTATTGT	NA	False	NA	22	True	NA	NA	NA	121001648	121028143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.31	chr2	+	4254	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	0	-4	0	4	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTTGTAGAACTATTGA	NA	False	NA	7	True	AATAAA	-19	NA	121001648	121029255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.32	chr2	+	2946	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	-31	0	10	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001658	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.33	chr2	+	4595	17	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	11	0	intron_retention	FALSE	canonical	3	163	junction_4	32.2829289253624	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001659	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.34	chr2	+	3439	18	NNC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	12	-782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	68.0794366059335	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTCCCAGTCCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	121001660	121028468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022732_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.35	chr2	+	2514	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	15	1721	15	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACGGAATCACGCTCCT	NA	False	NA	NA	False	AGTAAA	-19	NA	121001663	121027530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.36	chr2	+	2651	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	-32	1587	15	134	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATTTGAGTATCCTT	NA	False	NA	NA	False	NA	NA	NA	121001663	121027664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.37	chr2	+	2579	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	-22	358	19	-358	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATCTTTAGTGAGAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	121001667	121028892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.38	chr2	+	3595	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	19	636	19	-635	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTTTGTTTGCTGTA	NA	False	NA	18	True	AATAAA	-19	NA	121001667	121028615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.4	chr2	+	1499	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-11	-27	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATCTTCCTGCCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	120970897	120986043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.40	chr2	+	3242	18	NNC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-15	-261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.1959323085209	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATGTCTGTAACAAATC	NA	False	NA	NA	False	AAGAAA	-36	NA	121001674	121027269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121016289_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025874_121026008_121026583_121026724_121027215
ES.19911.42	chr2	+	3058	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-14	607	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACATACTCAATTTAGC	NA	False	NA	16	True	NA	NA	NA	121001675	121028137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.43	chr2	+	707	4	FSM	ENSMUSG00000027263.13	ENSMUST00000130929.8	626	4	-51	-30	-14	30	multi-exon	FALSE	canonical	3	202	junction_3	25.3026129524645	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTGTGCTTTGTTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	121001675	121006429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251
ES.19911.44	chr2	+	7338	14	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-14	0	intron_retention	FALSE	canonical	1	2	junction_8	83.5428529799149	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001675	121029251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121018612_121018664_121019005_121019112_121019842_121022892_121024422_121026724_121027215_121027352_121028644
ES.19911.45	chr2	+	4191	18	NNC	ENSMUSG00000027263.13	novel	2887	19	NA	NA	-13	0	intron_retention	FALSE	canonical	2	7	junction_9	67.2775072054438	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001676	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.46	chr2	+	3285	18	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	47	junction_17	54.1520351101821	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001676	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.47	chr2	+	3091	18	NNC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-13	609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	67.3978016542088	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATACTCAATTTAGCTA	NA	False	NA	18	True	NA	NA	NA	121001676	121028139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022732_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.48	chr2	+	3521	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-4	-640	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCCCTTTGTTTG	NA	False	NA	13	True	AATAAA	-14	NA	121001685	121028610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.49	chr2	+	4795	16	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-2	615	intron_retention	FALSE	canonical	3	163	junction_4	32.9441277856245	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATTTAGCTATTGTCG	NA	False	NA	24	True	NA	NA	NA	121001687	121028145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121026008_121026583_121026724_121027215
ES.19911.5	chr2	+	5374	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-9	2759	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTATGTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	120970899	120989920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.50	chr2	+	3468	19	NNC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-2	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	65.9779471200252	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATCTCCCTTTGTT	NA	False	NA	11	True	AATAAA	-12	NA	121001687	121028608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121028125_121028224
ES.19911.51	chr2	+	3376	19	NNC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	87.2868833216079	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001688	121029251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121006828_121006931_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.52	chr2	+	2968	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-1	607	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	70.2030258874217	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACATACTCAATTTAGC	NA	False	NA	16	True	NA	NA	NA	121001694	121028137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.53	chr2	+	2431	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACGGAATCACGCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	121001694	121027529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.54	chr2	+	3194	19	NNC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-1	609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.5373125221412	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATACTCAATTTAGCTA	NA	False	NA	18	True	NA	NA	NA	121001694	121028139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121006828_121006931_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.55	chr2	+	6414	17	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	0	-2	intron_retention	FALSE	canonical	3	47	junction_16	61.2749949000406	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCTGGCCTTGTAGAA	NA	False	NA	0	True	AATAAA	-12	NA	121001695	121029248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.57	chr2	+	3530	18	NNC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	6	-636	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	67.2775072054438	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCCCTTTGTTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	121001701	121028614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.58	chr2	+	2179	18	NNC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	11	-259	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	66.5739435920535	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCTGTAACAAATCTC	NA	False	NA	NA	False	AAGAAA	-38	NA	121001706	121027271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.6	chr2	+	5550	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-9	2935	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAGA	-15	NA	120970899	120990096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.60	chr2	+	3644	19	NNC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	-6	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.5373125221412	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCTCCCTTTGTTT	NA	False	NA	12	True	AATAAA	-13	NA	121001714	121028609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121006828_121006931_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.61	chr2	+	3484	18	NNC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-4	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.880619816799	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCTCCCTTTGTTT	NA	False	NA	12	True	AATAAA	-13	NA	121001716	121028609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025949_121026008_121026583_121026724_121027215
ES.19911.62	chr2	+	4130	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	61	junction_3	57.8950761615355	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001717	121029251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.65	chr2	+	6189	18	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_17	59.5017955008088	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001720	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.67	chr2	+	4079	17	NNC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_16	90.2274036809217	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCTGGCCTTGTAGAA	NA	False	NA	0	True	AATAAA	-12	NA	121001725	121029248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026720_121027215
ES.19911.68	chr2	+	3337	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	1	-782	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTCCCAGTCCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	121001727	121028468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.69	chr2	+	3417	16	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	5	-641	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	71.5723099777809	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCTCCCTTTGTTT	NA	False	NA	12	True	AATAAA	-13	NA	121001731	121028609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.7	chr2	+	2602	11	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	16.3572613844739	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATGCTTGAATTGCT	NA	False	NA	NA	False	NA	NA	NA	120970907	120987156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19911.72	chr2	+	2839	19	NNC	ENSMUSG00000027263.13	novel	2887	19	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	75.8457865232693	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001735	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.73	chr2	+	2816	18	NIC	ENSMUSG00000027263.13	novel	2887	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_17	69.7389596377052	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001737	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.76	chr2	+	3366	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	55	785	2	-784	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTTCCCAGTCCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	121001750	121028466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.77	chr2	+	5256	15	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	8	-450	intron_retention	FALSE	canonical	1	2	junction_8	68.8724049475935	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATGCAAAGAATACAATT	NA	False	NA	NA	False	AATAAA	-14	NA	121001756	121028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121018612_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121026008_121026583_121026724_121027215
ES.19911.78	chr2	+	2148	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	129	1929	51	-208	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGGTCTTCTAGAAGA	NA	False	NA	NA	False	NA	NA	NA	121001824	121027322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.8	chr2	+	4705	29	Fusion	ENSMUSG00000027259.16_ENSMUSG00000027263.13	novel	2477	11	NA	NA	0	-782	multi-exon	FALSE	canonical	0	0	junction_12	84.0949035680668	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTCCCAGTCCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	120970912	121028468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120975169_120975258_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815_120986014_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.80	chr2	+	2834	17	ISM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	2346	1114	-96	606	internal_fragment	FALSE	canonical	3	119	junction_11	42.4403993854912	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACACATACTCAATTTAG	NA	False	NA	15	True	NA	NA	NA	121004035	121028136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.81	chr2	+	1689	12	NNC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	79.4558976377555	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACGGAATCACGCTCCT	5532	False	NA	NA	False	AGTAAA	-19	NA	121014029	121027530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121014172_121014814_121014981_121015182_121015275_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.82	chr2	+	5927	10	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	756	-643	intron_retention	FALSE	canonical	3	119	junction_4	46.4768626892145	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTTATCTCCCTTTGT	6352	False	NA	10	True	AATAAA	-11	NA	121014849	121028607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121014981_121015182_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.83	chr2	+	2494	10	ISM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	13491	642	1087	-642	internal_fragment	FALSE	canonical	3	119	junction_4	46.7026316439356	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATCTCCCTTTGTT	6683	False	NA	11	True	AATAAA	-12	NA	121015180	121028608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.84	chr2	+	3462	9	NNC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	-1414	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.8680004005566	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGAATCACGCTCCTGA	15	False	NA	NA	False	AGTAAA	-21	NA	121016425	121027532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022732_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ES.19911.85	chr2	+	3982	9	NNC	ENSMUSG00000027263.13	novel	2887	19	NA	NA	-1194	0	intron_retention	FALSE	canonical	0	0	junction_5	104.742541500577	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	235	False	NA	3	True	AATAAA	-15	NA	121016645	121029251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121024558_121025949_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.86	chr2	+	2319	9	NIC	ENSMUSG00000027263.13	novel	2887	19	NA	NA	-216	0	intron_retention	FALSE	canonical	3	47	junction_8	72.1140589621746	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	1956	False	NA	2	True	AATAAA	-14	NA	121018366	121029250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121018664_121019005_121019112_121019842_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.87	chr2	+	4224	5	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	395	1687	intron_retention	FALSE	canonical	3	47	junction_4	96.4944946616127	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAACTGCTTCCTCTT	6412	False	NA	NA	False	TATAAA	-21	NA	121022822	121030938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121022892_121024422_121026008_121026583_121026724_121027215_121027352_121028644
ES.19911.88	chr2	+	2036	1	Antisense	novelGene_ENSMUSG00000043909.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGTATGTGACATACA	NA	False	NA	NA	False	NA	NA	NA	121030263	121032299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121030300_121032300
ES.19911.9	chr2	+	2666	12	NNC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	41.9692921980262	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	120970915	120987140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_120971148_120972573_120972785_120973004_120973136_120973629_120973691_120975169_120975258_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ES.19912.1	chr2	+	320	1	Intergenic	novelGene_16502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAATTCAAA	NA	False	NA	NA	False	NA	NA	NA	121070048	121070368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121070000_121070400
ES.19912.2	chr2	+	142	1	Intergenic	novelGene_16501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	121070048	121070190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121070000_121070200
ES.19913.1	chr2	+	2322	6	NIC	ENSMUSG00000027254.14	novel	11825	7	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	3.63318042491699	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGTGGTGCTGCCTA	NA	False	NA	9	True	AATAAA	-14	NA	121120082	121139916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121120354_121121200_121121303_121129077_121129161_121129386_121129528_121137995_121138217_121138412
ES.19913.2	chr2	+	7472	3	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	5165	1010	5156	807	3prime_fragment	FALSE	canonical	0	0	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTCATTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	121131099	121138909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121137854_121137995_121138217_121138412
ES.19913.3	chr2	+	7421	3	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	6224	2	6215	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTGGTGCTGCCTAG	NA	False	NA	10	True	AATAAA	-15	NA	121132158	121139917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121137854_121137995_121138217_121138412
ES.19913.4	chr2	+	6475	3	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	8565	-1393	8556	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	3.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATCTCTGCTAATTG	NA	False	NA	NA	False	NA	NA	NA	121134499	121141312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121137854_121137995_121138217_121138412
ES.19913.5	chr2	+	4565	3	NNC	ENSMUSG00000027254.14	novel	10145	6	NA	NA	9068	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTGGTGCTGCCTAG	NA	False	NA	10	True	AATAAA	-15	NA	121135011	121139917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121137854_121137998_121138217_121138412
ES.19913.6	chr2	+	2401	3	ISM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	10749	497	10740	-497	3prime_fragment	FALSE	canonical	0	0	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTTTAGCCATGTGTG	NA	False	NA	NA	False	NA	NA	NA	121136683	121139422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121137854_121137995_121138217_121138412
ES.19914.1	chr2	+	4582	30	Antisense	novelGene_ENSMUSG00000033526.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAGGAAGGCAGGAA	5300	False	NA	NA	False	ATTAAA	-26	NA	121147196	121182335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121147252_121152137_121152273_121157331_121157396_121158125_121158255_121162042_121162126_121162718_121162871_121164891_121165061_121165205_121165317_121166875_121166984_121167205_121167320_121167561_121167691_121167928_121168154_121168302_121168445_121171231_121171412_121172090_121172217_121172383_121172518_121173057_121173139_121173233_121173345_121173440_121173516_121173617_121173706_121173955_121174058_121177743_121177867_121177961_121178167_121178949_121179050_121179174_121179330_121179654_121179740_121179954_121180049_121180429_121180624_121180957_121181133_121181397
ES.19914.2	chr2	+	4462	30	Antisense	novelGene_ENSMUSG00000033526.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAGGAAGGCAGGAA	5300	False	NA	NA	False	ATTAAA	-26	NA	121147196	121182335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121147252_121152137_121152273_121157331_121157396_121158125_121158255_121162042_121162126_121162718_121162871_121164891_121165061_121165205_121165317_121166875_121166984_121167205_121167320_121167561_121167691_121167928_121168154_121168302_121168445_121171231_121171412_121172090_121172217_121172383_121172518_121173057_121173139_121173233_121173345_121173440_121173516_121173617_121173706_121173955_121174058_121177743_121177867_121177961_121178122_121178945_121179050_121179174_121179330_121179654_121179740_121179954_121180049_121180429_121180545_121180957_121181133_121181397
ES.19914.3	chr2	+	3458	6	Antisense	novelGene_ENSMUSG00000033526.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121154827	121165915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121157396_121158125_121158255_121162042_121162128_121164891_121165061_121165205_121165408_121165610
ES.19914.4	chr2	+	1596	1	Antisense	novelGene_ENSMUSG00000033526.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	9135	False	NA	NA	False	ATTAAA	-3	NA	121180716	121182312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121180700_121182300
ES.19915.1	chr2	+	1587	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	-70	1	-8	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	731	False	NA	31	True	AGTAAA	-19	NA	121188186	121194217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ES.19915.2	chr2	+	1479	10	NNC	ENSMUSG00000000308.15	novel	1518	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.9170193461351	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	800	False	NA	31	True	AGTAAA	-19	NA	121188255	121194217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121188341_121189315_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ES.19915.3	chr2	+	1606	10	NIC	ENSMUSG00000000308.15	novel	1518	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.8743660217344	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	801	False	NA	31	True	AGTAAA	-19	NA	121188256	121194217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121188430_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ES.19915.4	chr2	+	2451	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	-832	1	2	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTCTGTGTTATTTCTA	803	False	NA	31	True	AGTAAA	-19	NA	121188258	121194217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ES.19916.1	chr2	-	2744	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-5	317	-5	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTACCTTCTATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	120971139	120968395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120968400_120971100
ES.19916.2	chr2	-	2291	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-9	774	-9	-774	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTAGGGGCCTCAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	120971143	120968852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120968900_120971100
ES.19916.3	chr2	-	2171	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-38	923	-38	-923	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGACCTAAGGGTGAATTT	NA	False	NA	-4	True	AATAAA	-19	NA	120971172	120969001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120969000_120971200
ES.19917.1	chr2	-	1354	1	Genic_Genomic	ENSMUSG00000050619.15	novel	NA	NA	NA	NA	5470	662	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTACAGATTTTATCT	NA	False	NA	NA	False	NA	NA	NA	120989445	120988091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_120988100_120989400
ES.19917.10	chr2	-	4975	3	NNC	ENSMUSG00000050619.15	novel	3611	6	NA	NA	27	-496	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	121001579	120996117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120997335_120997415_120999885_121000290
ES.19917.11	chr2	-	2593	2	NNC	ENSMUSG00000050619.15	novel	2894	2	NA	NA	1958	-496	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	120998791	120996117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120997343_120997423
ES.19917.12	chr2	-	2418	2	FSM	ENSMUSG00000050619.15	ENSMUST00000146243.2	2894	2	-20	496	-20	-496	multi-exon	FALSE	canonical	2	2	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	121001626	120996117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120997200_121000290
ES.19917.13	chr2	-	1787	4	NNC	ENSMUSG00000050619.15	novel	3611	6	NA	NA	39	-506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.5797734872612	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAAAATGTTTTTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	121001567	120996127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120997200_120999679_120999885_121000290_121000475_121001241
ES.19917.2	chr2	-	6036	5	FSM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	-854	-110	3	110	multi-exon	FALSE	canonical	2	4	junction_2	14.6372811683044	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTTCTTTTACGTT	NA	False	NA	NA	False	AATAAA	-15	NA	121001603	120988643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290
ES.19917.3	chr2	-	5830	4	NIC	ENSMUSG00000050619.15	novel	5072	5	NA	NA	3	109	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	2.49443825784929	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTGTTCTTTTACGT	NA	False	NA	NA	False	AATAAA	-14	NA	121001603	120988644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120992031_120994227_120994684_120996524_120997200_121000290
ES.19917.4	chr2	-	5922	4	NNC	ENSMUSG00000050619.15	novel	5072	5	NA	NA	7	108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.39934634239519	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTGTTCTTTTACG	NA	False	NA	NA	False	AATAAA	-13	NA	121001599	120988645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_120992031_120994227_120994684_120996427_120997200_121000290
ES.19917.5	chr2	-	5905	5	FSM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	-857	24	0	-24	multi-exon	FALSE	canonical	2	4	junction_2	14.6372811683044	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGTGCTCTGTTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	121001606	120988777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290
ES.19917.6	chr2	-	4357	4	ISM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	-859	1980	-2	428	intron_retention	FALSE	canonical	2	4	junction_2	12.8322510366134	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGGTTCTATCTTTTCC	NA	False	NA	NA	False	TTTAAA	-14	NA	121001608	120990733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679
ES.19917.7	chr2	-	3502	4	NIC	ENSMUSG00000050619.15	novel	3611	6	NA	NA	-12	174	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	2.49443825784929	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGGTAATCCCTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	121001618	120990987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_120992031_120994227_120994684_120996524_120997200_121000290
ES.19917.8	chr2	-	3440	4	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	-862	2283	-5	-1482	5prime_fragment	FALSE	canonical	2	4	junction_1	14.7044966667418	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCAGCAAATCTCTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	121001611	120993444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120994684_120996524_120997200_120999679_120999885_121000290
ES.19917.9	chr2	-	2642	3	ISM	ENSMUSG00000050619.15	ENSMUST00000163766.8	3611	6	-39	4941	-39	-496	5prime_fragment	FALSE	canonical	3	33	junction_1	2	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCATTATCTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	121001645	120996117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_120997200_120999679_120999885_121000290
ES.19918.1	chr2	-	2999	18	NNC	ENSMUSG00000043909.17	novel	9405	27	NA	NA	7433	22085	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGAGGCGCCGGTGCCG	9028	False	NA	NA	False	NA	NA	NA	121028029	121001676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121001951_121004037_121004166_121005817_121005942_121006249_121006306_121007007_121007064_121009148_121009231_121013969_121014169_121014811_121014979_121015180_121015306_121018610_121018662_121019003_121019108_121019840_121019953_121020309_121020447_121022713_121022894_121024425_121024558_121025890_121026006_121026581_121026722_121027212
ES.19918.11	chr2	-	6219	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	-7	3409	-7	4	multi-exon	FALSE	canonical	3	115	junction_12	23.0142199734784	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTCATCTGTTTCTT	8065	False	NA	-1	True	AATAAA	-30	NA	121101895	121028727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.12	chr2	-	9903	8	NIC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_7	65.8935443247172	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	NA	False	NA	-5	True	AATAAA	-26	NA	121048957	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121041904_121046147_121046653_121048866
ES.19918.13	chr2	-	5883	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	38.220413393892	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8073	False	NA	-5	True	AATAAA	-26	NA	121101887	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.14	chr2	-	6302	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-18945	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_27	44.4417900441911	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	NA	False	NA	-5	True	AATAAA	-26	NA	121120833	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752_121101943_121120700
ES.19918.15	chr2	-	6098	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	36.8689707737707	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8087	False	NA	-5	True	AATAAA	-26	NA	121101873	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.16	chr2	-	6146	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	36.5547487621577	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8106	False	NA	-5	True	AATAAA	-26	NA	121101854	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078744_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.18	chr2	-	6329	29	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	50.8689166748563	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8086	False	NA	-5	True	AATAAA	-26	NA	121101874	121028731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121058502_121058644_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.19	chr2	-	6318	29	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	44.8227091450533	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGTCTTCATCTGT	8102	False	NA	-6	True	AATAAA	-25	NA	121101858	121028732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121058502_121058644_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.2	chr2	-	4183	7	NNC	ENSMUSG00000043909.17	novel	9405	27	NA	NA	7433	5855	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAAAGCTAAATGGGA	9028	False	NA	NA	False	NA	NA	NA	121028029	121017906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121018662_121019003_121019110_121019840_121020447_121022713_121022889_121024419_121026006_121026581_121026724_121027216
ES.19918.20	chr2	-	6205	28	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	35.2770341128966	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGATGTCTTCATCTGT	8068	False	NA	-6	True	AATAAA	-25	NA	121101892	121028732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.22	chr2	-	3379	10	NIC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	176	-2	intron_retention	FALSE	canonical	3	146	junction_8	22.2699487490194	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	NA	False	NA	-7	True	AATAAA	-24	NA	121042280	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121039834_121041750
ES.19918.23	chr2	-	6085	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	36.7544426328905	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8073	False	NA	-7	True	AATAAA	-24	NA	121101887	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.24	chr2	-	6623	29	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.8480151530099	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8085	False	NA	-7	True	AATAAA	-24	NA	121101875	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121033877_121033934_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121052134_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078744_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.25	chr2	-	8314	26	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_11	37.9135859554329	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8107	False	NA	-7	True	AATAAA	-24	NA	121101853	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179_121038611_121038835_121039834_121041750_121041904_121046147_121046653_121051638_121051725_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.26	chr2	-	6085	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	45.0542243978817	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8067	False	NA	-7	True	AATAAA	-24	NA	121101893	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.29	chr2	-	6023	27	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_18	44.1013491186249	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8096	False	NA	-7	True	AATAAA	-24	NA	121101864	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.3	chr2	-	7369	4	NNC	ENSMUSG00000043909.17	novel	9405	27	NA	NA	7433	5855	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAAAGCTAAATGGGA	9028	False	NA	NA	False	NA	NA	NA	121028029	121017906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121019110_121019840_121022889_121024419_121026722_121027213
ES.19918.31	chr2	-	6115	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	34.9539771880397	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8097	False	NA	-7	True	AATAAA	-24	NA	121101863	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.32	chr2	-	1882	9	NNC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	181	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.1847047110461	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	NA	False	NA	-7	True	AATAAA	-24	NA	121038874	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038603_121038835
ES.19918.33	chr2	-	9118	24	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	115	junction_9	22.7646793041001	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8103	False	NA	-7	True	AATAAA	-24	NA	121101857	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.34	chr2	-	5636	24	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	55.2408714199577	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8075	False	NA	-7	True	AATAAA	-24	NA	121101885	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.35	chr2	-	6019	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	36.0801956932332	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGATGTCTTCATCTG	8097	False	NA	-7	True	AATAAA	-24	NA	121101863	121028733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033185_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.37	chr2	-	6248	29	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.1327265983796	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8085	False	NA	-8	True	AATAAA	-23	NA	121101875	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121033877_121033934_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.39	chr2	-	5769	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	37.6795753691572	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8086	False	NA	-8	True	AATAAA	-23	NA	121101874	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.4	chr2	-	7146	5	NNC	ENSMUSG00000043909.17	novel	9405	27	NA	NA	7430	5813	intron_retention	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	9025	False	NA	NA	False	NA	NA	NA	121028032	121017948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121018662_121019003_121022899_121024425_121026006_121026581_121026724_121027216
ES.19918.40	chr2	-	6716	7	NIC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	554	-3	intron_retention	FALSE	canonical	3	154	junction_5	21.733231083604	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	NA	False	NA	-8	True	AATAAA	-23	NA	121041902	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179
ES.19918.41	chr2	-	5936	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	44.9497497212165	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8098	False	NA	-8	True	AATAAA	-23	NA	121101862	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.42	chr2	-	6070	27	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	52.0258242657677	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8110	False	NA	-8	True	AATAAA	-23	NA	121101850	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038613_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.44	chr2	-	5761	25	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.2358422031283	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8097	False	NA	-8	True	AATAAA	-23	NA	121101863	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038609_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.45	chr2	-	7384	25	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_8	47.061997378163	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8102	False	NA	-8	True	AATAAA	-23	NA	121101858	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.46	chr2	-	6132	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	43.5083203180709	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8073	False	NA	-8	True	AATAAA	-23	NA	121101887	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.47	chr2	-	5789	26	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	46.4965202999106	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8098	False	NA	-8	True	AATAAA	-23	NA	121101862	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.49	chr2	-	6060	27	FSM	ENSMUSG00000043909.17	ENSMUST00000110647.8	9405	27	-71	3416	-5	-3	multi-exon	FALSE	canonical	3	11	junction_8	35.6224656526131	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8067	False	NA	-8	True	AATAAA	-23	NA	121101893	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.5	chr2	-	4797	1	Genic_Genomic	ENSMUSG00000043909.17	novel	NA	NA	NA	NA	7433	529	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTGTAGACCAGGCT	9028	False	NA	NA	False	NA	NA	NA	121028029	121023232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_121023200_121028000
ES.19918.51	chr2	-	6477	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_17	35.6504361824649	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGATGTCTTCATCT	8073	False	NA	-8	True	AATAAA	-23	NA	121101887	121028734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.52	chr2	-	6156	27	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	45.1672107072921	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGGGATGTCTTCATC	8077	False	NA	-9	True	AATAAA	-22	NA	121101883	121028735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046097_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.53	chr2	-	6002	14	NIC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	56	-4	intron_retention	FALSE	canonical	3	10	junction_11	47.218615324214	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGGGATGTCTTCATC	NA	False	NA	-9	True	AATAAA	-22	NA	121066431	121028735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121059189_121066053
ES.19918.55	chr2	-	6975	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	115	junction_10	23.2242631745337	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGGGATGTCTTCATC	8102	False	NA	-9	True	AATAAA	-22	NA	121101858	121028735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.56	chr2	-	5996	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	44.2962224737481	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTAACTGGGATGTCTTC	8121	False	NA	-12	True	AATAAA	-19	NA	121101839	121028738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.57	chr2	-	5938	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-4	-168	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_19	35.5470282984454	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTGGTCTTACTGGTT	8105	False	NA	NA	False	TATAAA	-23	NA	121101855	121028899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078008_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.58	chr2	-	5648	26	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	2	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	46.4965202999106	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTGGTCTTACTGGTT	8074	False	NA	NA	False	TATAAA	-23	NA	121101886	121028899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.59	chr2	-	5918	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-11	-171	combination_of_known_splicesites	FALSE	canonical	3	10	junction_12	35.4479366538837	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATACTTGGTCTTACTG	8098	False	NA	NA	False	TATAAA	-20	NA	121101862	121028902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.6	chr2	-	9598	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-13	3	intron_retention	TRUE	non_canonical	0	0	junction_19	36.296825392969	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTTCTAACGTGCTC	8096	False	NA	NA	False	NA	NA	NA	121101864	121025315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078075_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.60	chr2	-	6053	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	6	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	45.6277957784446	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATACTTGGTCTTACTG	8078	False	NA	NA	False	TATAAA	-20	NA	121101882	121028902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046097_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078744_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.61	chr2	-	4152	17	ISM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	30	20427	-7	624	5prime_fragment	FALSE	canonical	3	115	junction_1	16.3868039516557	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATTTGTTTTGTTTTTT	8102	False	NA	NA	False	NA	NA	NA	121101858	121045745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.62	chr2	-	4708	5	NNC	ENSMUSG00000043909.17	novel	3043	4	NA	NA	12	1711	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72.2301010659683	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTATCTCAGGTCAG	8084	False	NA	NA	False	ATTAAA	-18	NA	121101876	121096081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121096633_121096712_121100470_121100699_121100791_121101004_121101190_121101752
ES.19918.63	chr2	-	177	1	Intergenic	novelGene_16503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGACTCTGGA	7136	False	NA	NA	False	NA	NA	NA	121109323	121109146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121109100_121109300
ES.19918.64	chr2	-	212	1	Intergenic	novelGene_16504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAATGAAGCACCAAAATT	6510	False	NA	NA	False	NA	NA	NA	121109949	121109737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121109700_121109900
ES.19918.7	chr2	-	7860	7	NIC	ENSMUSG00000043909.17	novel	3983	18	NA	NA	-573	2	intron_retention	FALSE	canonical	3	154	junction_5	21.733231083604	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTGTTCTAACGTGCT	NA	False	NA	NA	False	NA	NA	NA	121039628	121025316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121035030_121035400_121035593_121038179
ES.19918.8	chr2	-	10390	26	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	-9	2	intron_retention	FALSE	canonical	3	10	junction_5	36.3956920527691	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTGTTCTAACGTGCT	8100	False	NA	NA	False	NA	NA	NA	121101860	121025316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ES.19919.1	chr2	-	5904	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	3	4	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_31	26.2627945009666	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTGACTCCTTTGTGA	NA	False	NA	-1	True	AATAAA	-21	NA	121185808	121141037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.10	chr2	-	5646	32	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	23.6988564290724	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGACTCCTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	121185809	121141040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152199_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.11	chr2	-	5647	31	NIC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	23.8960945205139	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGACTCCTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	121185809	121141040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.12	chr2	-	3811	15	NIC	ENSMUSG00000033526.17	novel	5494	29	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	24.4153055040715	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGACTCCTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	121172479	121141040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385
ES.19919.13	chr2	-	6026	31	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_30	22.9412050443931	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGACTCCTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	121185814	121141040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181956_121185781
ES.19919.14	chr2	-	5735	32	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	29.2921699005347	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185817	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181349_121181495_121185787
ES.19919.15	chr2	-	5418	29	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	23.8705052399015	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121181495	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397
ES.19919.17	chr2	-	5700	31	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-458	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_30	25.6212585344454	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121181956	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763
ES.19919.18	chr2	-	5505	31	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	23.6085907151519	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185819	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152199_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.2	chr2	-	5740	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	26.8018626917981	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTGACTCCTTTGTG	NA	False	NA	-2	True	AATAAA	-20	NA	121185800	121141038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181918_121181956_121185781
ES.19919.20	chr2	-	5750	32	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_31	23.186750316043	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185699	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185630
ES.19919.21	chr2	-	5724	32	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_31	23.2938966071957	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185559	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185516
ES.19919.22	chr2	-	5876	33	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	26.8018626917981	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185810	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181789_121181956_121185781
ES.19919.23	chr2	-	6352	30	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	9	0	intron_retention	FALSE	canonical	3	16	junction_10	21.1113913381628	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185802	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.24	chr2	-	5601	31	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	27.1218648981879	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121181495	121141041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179328_121179654_121179741_121179955_121180047_121180427_121180545_121180957_121181133_121181397
ES.19919.25	chr2	-	5467	30	NIC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	26.4478487579595	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGGGGTGTGACTCCTT	NA	False	NA	-6	True	AATAAA	-16	NA	121185805	121141042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.26	chr2	-	5806	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	60	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	29.305352939992	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGGGGTGTGACTCCTT	NA	False	NA	-6	True	AATAAA	-16	NA	121185705	121141042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121182588_121182664_121185630
ES.19919.27	chr2	-	5686	31	NNC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	29.8813208097188	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121185809	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.28	chr2	-	5690	32	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	22.2382333347826	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121185816	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.29	chr2	-	5281	29	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	23.5069193026658	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121185817	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.3	chr2	-	5846	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	29.3528506920537	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121185816	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152199_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.30	chr2	-	5375	29	NIC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	24.7089176663993	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121185816	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.31	chr2	-	6502	31	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	7	-2	intron_retention	FALSE	canonical	3	16	junction_11	21.2802464480299	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121185804	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.32	chr2	-	6077	28	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	3	-2	intron_retention	FALSE	canonical	2	4	junction_2	27.1611559964175	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGGGGGTGTGACTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	121181495	121141043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152199_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397
ES.19919.34	chr2	-	5953	31	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	26.5385254551441	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185804	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179271_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181956_121185781
ES.19919.35	chr2	-	5884	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_31	28.3322744134229	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185819	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.36	chr2	-	5572	31	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_30	23.165611486761	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185560	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185516
ES.19919.37	chr2	-	5500	30	FSM	ENSMUSG00000033526.17	ENSMUST00000110625.8	5226	30	61	-335	-2	-3	multi-exon	FALSE	canonical	2	6	junction_3	23.8095894908782	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185816	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121142964_121147135_121147250_121152135_121152274_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.38	chr2	-	6210	30	NNC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	4	junction_2	27.1713635365032	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185801	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152199_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181956_121185781
ES.19919.39	chr2	-	5817	33	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	26.8018626917981	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185805	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181840_121181956_121185781
ES.19919.4	chr2	-	6251	34	NNC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	-3176	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	30.1127358355918	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121189053	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781_121186139_121188296_121188397_121188593_121188749_121188947
ES.19919.40	chr2	-	5724	32	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	29.4950920977779	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGAGGGGGTGTGACTCC	NA	False	NA	-8	True	AATAAA	-14	NA	121185734	121141044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121182547_121182664_121185630
ES.19919.41	chr2	-	6073	32	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.8400278832604	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGAGGGGGTGTGACTC	NA	False	NA	-9	True	AATAAA	-13	NA	121185801	121141045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162807_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181956_121185781
ES.19919.42	chr2	-	5722	31	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-458	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.3227621834494	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGAGGGGGTGTGACTC	NA	False	NA	-9	True	AATAAA	-13	NA	121181956	121141045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173233_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763
ES.19919.43	chr2	-	5844	32	NNC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.1413251153402	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGAACGAGGGGGTGT	NA	False	NA	-14	True	AATAAA	-8	NA	121185813	121141050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152281_121158121_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.44	chr2	-	5870	31	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	7	-22	intron_retention	FALSE	canonical	0	0	junction_19	26.3197433287046	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACACAAAATAATGAG	NA	False	NA	-27	True	NA	NA	NA	121185804	121141063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173343_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.45	chr2	-	5504	31	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-8	-22	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	22.0581050863396	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACACAAAATAATGAG	NA	False	NA	-27	True	NA	NA	NA	121185800	121141063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.46	chr2	-	5600	31	NIC	ENSMUSG00000033526.17	novel	5226	30	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	26.3926757516803	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACACAAAATAATGAG	NA	False	NA	-27	True	NA	NA	NA	121185809	121141063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.47	chr2	-	3980	31	NNC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	-8	2782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.8717323594888	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCCAGCTCCTCACTG	NA	False	NA	NA	False	AATAAA	-15	NA	121185800	121149353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121149694_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.48	chr2	-	3407	26	NNC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	25.6438998594208	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGAGTCCAGGAATAA	NA	False	NA	NA	False	NA	NA	NA	121185804	121162550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173250_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.49	chr2	-	3406	26	NNC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	27.5070899951267	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCATGAGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	121185816	121162555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167587_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178946_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.5	chr2	-	4262	20	NIC	ENSMUSG00000033526.17	novel	5494	29	NA	NA	1436	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	26.5347730878838	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121177836	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121152135_121152274_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744
ES.19919.50	chr2	-	3413	26	NIC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	19.9040096462999	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCATGAGTCCAGG	NA	False	NA	NA	False	NA	NA	NA	121185800	121162555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.51	chr2	-	3589	27	NNC	ENSMUSG00000033526.17	novel	3438	26	NA	NA	-2	-34	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_25	28.4432373593318	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAACAATA	NA	False	NA	NA	False	NA	NA	NA	121185816	121162587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.53	chr2	-	1466	10	ISM	ENSMUSG00000033526.17	ENSMUST00000150081.8	2485	18	-12	6649	7	41	5prime_fragment	FALSE	canonical	3	56	junction_9	18.8017598335769	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCAGGATGTCTCAGCC	NA	False	NA	NA	False	TTTAAA	-39	NA	121185804	121177487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.54	chr2	-	1583	11	NNC	ENSMUSG00000033526.17	novel	2485	18	NA	NA	-8	-30	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	41.286922869112	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTTTGCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	121185800	121177558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121181763_121181956_121185781
ES.19919.55	chr2	-	1211	8	ISM	ENSMUSG00000033526.17	ENSMUST00000150081.8	2485	18	-24	7835	-2	-1	5prime_fragment	FALSE	canonical	3	56	junction_7	19.2629495272608	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATATCAGTCTCTGTA	NA	False	NA	NA	False	AATACA	-34	NA	121185816	121178673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.6	chr2	-	5718	32	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	19.1421648876737	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121185816	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.19919.7	chr2	-	5575	30	NIC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_23	21.819168175737	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121181495	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178165_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397
ES.19919.8	chr2	-	5514	31	NNC	ENSMUSG00000033526.17	novel	5171	30	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	24.0949280047805	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGTGTGACTCCTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	121185816	121141039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171361_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
ES.1992.1	chr1	+	175	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTATGGAT	NA	False	NA	NA	False	NA	NA	NA	178112372	178112547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178112400_178112500
ES.19920.1	chr2	+	135	1	Intergenic	novelGene_16505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9239	False	NA	NA	False	NA	NA	NA	121196694	121196829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121196700_121196800
ES.19921.1	chr2	+	172	1	Intergenic	novelGene_16506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATATATATATTTAATAA	NA	False	NA	NA	False	NA	NA	NA	121219299	121219471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121219300_121219500
ES.19922.1	chr2	+	178	1	Intergenic	novelGene_16507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	121221902	121222080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121221900_121222100
ES.19923.1	chr2	-	171	1	Intergenic	novelGene_16508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	121222285	121222114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121222100_121222300
ES.19924.1	chr2	+	3265	1	Antisense	novelGene_ENSMUSG00000033486.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121223364	121226629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121223400_121226600
ES.19924.2	chr2	+	302	1	Intergenic	novelGene_16509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACATAAAATAAACAC	NA	False	NA	NA	False	NA	NA	NA	121224480	121224782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121224500_121224800
ES.19925.1	chr2	+	2328	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	-258	700	-258	-700	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCCCCTCATGGGA	NA	False	NA	12	True	AATAAA	-21	NA	121243997	121268468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.12	chr2	+	1866	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	47	-708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1123.77447778595	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244410	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262799_121262839_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.15	chr2	+	2176	12	NIC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	63	-708	intron_retention	FALSE	canonical	3	3731	junction_4	286.627209149434	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244426	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.16	chr2	+	1769	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	171	830	63	-830	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGGAGAAAATTATTT	NA	False	NA	10	True	AATACA	-21	NA	121244426	121268338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.17	chr2	+	1877	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	65	-713	at_least_one_novel_splicesite	FALSE	canonical	1	46	junction_12	1141.56200250164	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTATACTGTCGTTTTTT	NA	False	NA	-1	True	AATAAA	-8	NA	121244428	121268455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266889_121268066
ES.19925.19	chr2	+	1809	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	66	-708	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1123.77447778595	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244429	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244576_121244654_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.22	chr2	+	1553	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	175	1042	67	-1042	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATTCAAGAAGAAAAACC	NA	False	NA	53	True	ATTAAA	-44	NA	121244430	121268126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.23	chr2	+	1757	12	NIC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	67	-708	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	1219.87236834077	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244430	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.24	chr2	+	1875	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	69	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1169.56118017258	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244432	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259944_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.25	chr2	+	2580	12	NIC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	69	-708	intron_retention	FALSE	canonical	3	3731	junction_4	262.163755524565	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244432	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.27	chr2	+	1805	12	NIC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	69	-709	combination_of_known_junctions	FALSE	canonical	1	99	junction_1	1162.88953306653	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCGTTTTTTTCCC	NA	False	NA	3	True	AATAAA	-12	NA	121244432	121268459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121244687_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.30	chr2	+	2547	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	69	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1123.77447778595	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGAATCTTGTCCATA	NA	False	NA	NA	False	ATTAAA	-23	NA	121244432	121269165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066_121269075_121269117
ES.19925.31	chr2	+	3577	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	177	-984	69	984	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAACACAGTAACACAAA	NA	False	NA	NA	False	NA	NA	NA	121244432	121270152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.33	chr2	+	1976	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	72	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1478.7907942024	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244435	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121245000_121245095_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.34	chr2	+	1853	13	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	74	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1167.74087153596	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCGTTTTTTTCCC	NA	False	NA	3	True	AATAAA	-12	NA	121244437	121268459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266863_121266896_121268066
ES.19925.35	chr2	+	957	6	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	19738	708	8883	-708	3prime_fragment	FALSE	canonical	3	4005	junction_4	168.839094998759	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121263993	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19925.4	chr2	+	1841	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	31	-708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1123.77447778595	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244394	121268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066_121268234_121268315
ES.19925.7	chr2	+	3494	14	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	34	909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1123.77447778595	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTACTGTGCTCACAG	NA	False	NA	NA	False	AGTAAA	-14	NA	121244397	121270077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066_121269075_121269117
ES.19925.8	chr2	+	1776	12	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	36	-709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1218.36174383595	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGTCGTTTTTTTCCC	NA	False	NA	3	True	AATAAA	-12	NA	121244399	121268459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121244687_121252929_121252986_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ES.19926.1	chr2	-	3574	12	NNC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	26	1	intron_retention	TRUE	non_canonical	0	0	junction_9	6.62452243717697	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATTTTTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	121244247	121223110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121224066_121224827_121224969_121227433_121227602_121227941_121228370_121229926_121229951_121230524_121230704_121236809_121236935_121237187_121237997_121240618_121240698_121240857_121241032_121242630_121242772_121243896
ES.19926.10	chr2	-	1444	8	ISM	ENSMUSG00000033486.15	ENSMUST00000154604.8	2293	9	-119	1730	64	-4	5prime_fragment	FALSE	canonical	1	1	junction_4	5.84842556870249	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATATTTCTGGTAAGT	NA	False	NA	NA	False	AATAAA	-8	NA	121244209	121224841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121224969_121227433_121227602_121227941_121228370_121229926_121229951_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.11	chr2	-	1150	4	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	15	4245	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	5.90668171555645	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121244258	121236461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121236935_121240857_121241032_121242630_121242772_121243896
ES.19926.12	chr2	-	149	1	Intergenic	novelGene_16510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAAAAAGA	3046	False	NA	NA	False	NA	NA	NA	121238787	121238638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121238600_121238800
ES.19926.13	chr2	-	2205	3	NNC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	56	-16	intron_retention	FALSE	canonical	2	2	junction_2	7.5	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCATGCTTCCTTAAA	NA	False	NA	NA	False	TATAAA	-14	NA	121244217	121240722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121242772_121243896_121243962_121244126
ES.19926.14	chr2	-	153	1	Intergenic	novelGene_16511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGAAATCTAGG	24	False	NA	NA	False	NA	NA	NA	121241809	121241656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121241700_121241800
ES.19926.2	chr2	-	2643	9	NNC	ENSMUSG00000033486.15	novel	2293	9	NA	NA	-551	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.22409163839994	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGCATTTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	121244824	121223114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121224066_121224827_121224969_121227433_121227602_121227941_121228370_121240618_121240688_121240857_121241032_121242630_121242772_121243896_121243962_121244318
ES.19926.3	chr2	-	3225	7	NIC	ENSMUSG00000033486.15	novel	2293	9	NA	NA	-15	-4	intron_retention	FALSE	canonical	0	0	junction_3	5.93483127158829	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAAGCATTTTTGTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	121244288	121223115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.4	chr2	-	5300	7	NNC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	6.15539510420646	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGGTAAGTTCAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	121244279	121224835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121224964_121227433_121227602_121227941_121228370_121236809_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.5	chr2	-	1076	6	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.46838465151849	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTCTGGTAAGTTCAA	NA	False	NA	NA	False	AATAAA	-12	NA	121244289	121224837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121227602_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.6	chr2	-	2388	9	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	34	0	intron_retention	FALSE	canonical	2	2	junction_4	5.57757787933078	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTCTGGTAAGTTCAA	NA	False	NA	NA	False	AATAAA	-12	NA	121244239	121224837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121236809_121236935_121237187_121237997_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.7	chr2	-	1675	8	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.64247310717867	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTCTGGTAAGTTCAA	NA	False	NA	NA	False	AATAAA	-12	NA	121244281	121224837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121230524_121230704_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19926.8	chr2	-	1550	7	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	5.52016505389306	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATTTCTGGTAAGTTC	NA	False	NA	NA	False	AATAAA	-10	NA	121244281	121224839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121227602_121227941_121228370_121236809_121236935_121240857_121241032_121242630_121242772_121243896
ES.19926.9	chr2	-	1830	6	NIC	ENSMUSG00000033486.15	novel	2247	13	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_2	6.46838465151849	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATATTTCTGGTAAGT	NA	False	NA	NA	False	AATAAA	-8	NA	121244279	121224841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121224969_121227433_121228370_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ES.19927.1	chr2	-	1814	1	Intergenic	novelGene_16512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGAACCTCACCACTTA	NA	False	NA	NA	False	AAAAAG	-15	NA	121246922	121245108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121245100_121246900
ES.19927.2	chr2	-	166	1	Intergenic	novelGene_16513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTGGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	121246859	121246693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121246700_121246900
ES.19928.1	chr2	-	2767	3	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	1621	2490	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGAGAAGGAAGGAGGA	1395	False	NA	NA	False	NA	NA	NA	121270011	121267000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121267030_121267230_121269073_121269115
ES.19928.2	chr2	-	2740	2	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	1624	2265	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGATTTA	1398	False	NA	NA	False	NA	NA	NA	121270008	121267225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121269073_121269115
ES.19928.3	chr2	-	2786	1	Genic_Genomic	ENSMUSG00000027246.13_ENSMUSG00000046110.16	novel	NA	NA	NA	NA	1621	2265	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGATTTA	1395	False	NA	NA	False	NA	NA	NA	121270011	121267225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_121267200_121270000
ES.19928.4	chr2	-	2439	1	Genic_Genomic	ENSMUSG00000027246.13_ENSMUSG00000046110.16	novel	NA	NA	NA	NA	1623	1920	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGGATAGCCGGGTG	1397	False	NA	NA	False	NA	NA	NA	121270009	121267570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_121267600_121270000
ES.19928.5	chr2	-	1724	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	-44	-6	-44	6	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGATCATTAGCCTTTAT	NA	False	NA	-11	True	ATTAAA	-21	NA	121273126	121269501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ES.19928.6	chr2	-	1687	11	NNC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	25.4943130913543	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273077	121269507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121270049_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ES.19928.7	chr2	-	1775	10	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	70	junction_4	8.33259255966786	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273108	121269507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ES.19928.8	chr2	-	1843	9	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	70	junction_3	8.70254991367473	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273099	121269507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121270153_121270328_121270501_121270596_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ES.19928.9	chr2	-	2402	6	NIC	ENSMUSG00000027246.13	novel	1674	11	NA	NA	-6	-24	intron_retention	FALSE	canonical	3	70	junction_1	8.93084542470644	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAAACTGATTGCT	NA	False	NA	-41	True	NA	NA	NA	121273088	121269531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272663_121272876
ES.19929.1	chr2	+	2709	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	-46	393	-46	22	multi-exon	FALSE	canonical	3	5931	junction_1	722	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTAGGATGTGTGTC	NA	False	NA	25	True	NA	NA	NA	121279629	121283508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281201
ES.19929.10	chr2	+	2511	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	-6	-1980	-1	29	multi-exon	FALSE	canonical	3	183	junction_2	2874	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATGTGTGTCTCTGTGT	NA	False	NA	32	True	NA	NA	NA	121279857	121283515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281178
ES.19929.11	chr2	+	3100	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	9	-4	-1	4	multi-exon	FALSE	canonical	3	5931	junction_1	0	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCATTCTGGGTAGAA	NA	False	NA	7	True	NA	NA	NA	121279857	121283490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455
ES.19929.12	chr2	+	1355	4	NNC	ENSMUSG00000074884.13	novel	1899	7	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	2536.70788402782	1051	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTTCAGTTTCA	NA	False	NA	25	True	AATAAA	-20	NA	121279861	121288792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121279923_121280455_121280565_121287502_121288525_121288629
ES.19929.13	chr2	+	831	6	NNC	ENSMUSG00000074884.13	novel	695	6	NA	NA	0	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2030.96524834868	1051	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGGCTCTTATATTG	NA	False	NA	9	True	TATAAA	-17	NA	121279863	121288914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121279923_121280455_121280565_121287502_121287773_121288126_121288183_121288472_121288525_121288629
ES.19929.14	chr2	+	8413	3	NIC	ENSMUSG00000027245.12	novel	1349	3	NA	NA	-3907	-3	intron_retention	FALSE	canonical	3	4570	junction_2	680.5	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGGCTCTTATATTG	NA	False	NA	9	True	TATAAA	-17	NA	121279863	121288914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121279923_121280455_121288525_121288629
ES.19929.15	chr2	+	7134	6	NIC	ENSMUSG00000074884.13	novel	695	6	NA	NA	1	123	intron_retention	FALSE	canonical	3	4276	junction_4	1146.58180693747	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTCTTATATTGTGT	NA	False	NA	12	True	TATAAA	-20	NA	121279864	121288917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121279923_121280455_121280565_121281201_121287773_121288126_121288183_121288472_121288525_121288629
ES.19929.16	chr2	+	8381	2	FSM	ENSMUSG00000074884.13_ENSMUSG00000027245.12	ENSMUST00000134412.2	3105	2	29	-5305	14	-1	multi-exon	FALSE	canonical	3	5931	junction_1	0	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTTCAGTTTC	NA	False	NA	24	True	AATAAA	-19	NA	121279877	121288791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455
ES.19929.17	chr2	+	407	5	NIC	ENSMUSG00000074884.13	novel	695	6	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	3	147	junction_2	2161.36542491084	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTTTTTTTCTTCAG	NA	False	NA	20	True	AATAAA	-15	NA	121279890	121288787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121279923_121280455_121280565_121288126_121288183_121288472_121288525_121288629
ES.19929.18	chr2	+	520	3	NNC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3686.5	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTGAGCGCCTGGTT	NA	False	NA	-5	True	ATTAAA	-12	NA	121279915	121281533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121279995_121280455_121280565_121281201
ES.19929.19	chr2	+	2795	3	NNC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	50	6	intron_retention	FALSE	canonical	1	1	junction_1	3687	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTCTGGGTAGAAGT	NA	False	NA	9	True	NA	NA	NA	121279942	121283492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121280338_121280455_121280565_121281201
ES.19929.2	chr2	+	646	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	53	2357	53	9	multi-exon	FALSE	canonical	3	5931	junction_1	722	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGTTTGACTGGGGAT	NA	False	NA	6	True	ATTAAA	-23	NA	121279728	121281544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281201
ES.19929.20	chr2	+	4530	3	FSM	ENSMUSG00000027245.12	ENSMUST00000125849.8	1349	3	-3307	126	96	4	multi-exon	FALSE	canonical	3	4276	junction_1	147	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTTCAGTTTC	NA	False	NA	24	True	AATAAA	-19	NA	121283866	121288791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121288183_121288472_121288525_121288629
ES.19929.21	chr2	+	4121	3	FSM	ENSMUSG00000027245.12	ENSMUST00000125849.8	1349	3	-2775	3	628	-3	multi-exon	FALSE	canonical	3	4276	junction_1	147	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGGCTCTTATATTG	NA	False	NA	9	True	TATAAA	-17	NA	121284398	121288914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121288183_121288472_121288525_121288629
ES.19929.22	chr2	+	496	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	123	342	-38	24	multi-exon	FALSE	canonical	3	4276	junction_2	190.202231556017	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCAGATCAAATGCATTA	NA	False	NA	44	True	AATAAA	-39	NA	121287566	121288811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ES.19929.23	chr2	+	404	3	NIC	ENSMUSG00000027245.12	novel	961	4	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	2366	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTTTTTTTTTTTCTT	NA	False	NA	17	True	AATAAA	-12	NA	121287579	121288784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121287773_121288126_121288183_121288629
ES.19929.24	chr2	+	505	4	NNC	ENSMUSG00000027245.12	novel	961	4	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2088.00335248773	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTTCAGTTTC	NA	False	NA	24	True	AATAAA	-19	NA	121287591	121288791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121287773_121288072_121288183_121288472_121288525_121288629
ES.19929.3	chr2	+	557	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	-28	-4	-13	4	multi-exon	FALSE	canonical	3	183	junction_2	2874	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCGCCTGGTTTGACTG	NA	False	NA	1	True	ATTAAA	-18	NA	121279835	121281539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281178
ES.19929.4	chr2	+	2910	3	FSM	ENSMUSG00000074884.13_ENSMUSG00000027245.12	ENSMUST00000099475.12	525	3	-15	-2370	0	4	multi-exon	FALSE	canonical	3	183	junction_2	2874	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGAGTCCTGGGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	121279848	121283905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281178
ES.19929.5	chr2	+	2888	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	-5	0	5	multi-exon	FALSE	canonical	3	5931	junction_1	722	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGAGTCCTGGGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	121279848	121283906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455_121280565_121281201
ES.19929.6	chr2	+	3646	1	NIC	ENSMUSG00000074884.13	novel	3056	3	NA	NA	1	9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGGTAGAAGTTGG	NA	False	NA	12	True	NA	NA	NA	121279849	121283495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121279800_121283500
ES.19929.7	chr2	+	1160	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	1	1944	1	7	multi-exon	FALSE	canonical	3	5931	junction_1	0	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCTGGTTTGACTGGGG	NA	False	NA	4	True	ATTAAA	-21	NA	121279849	121281542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455
ES.19929.8	chr2	+	8322	3	NIC	ENSMUSG00000027245.12	novel	1349	3	NA	NA	-3921	22	intron_retention	FALSE	canonical	3	4570	junction_2	680.5	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTCAGATCAAATGCAT	NA	False	NA	42	True	AATAAA	-37	NA	121279849	121288809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121279923_121280455_121288525_121288629
ES.19929.9	chr2	+	3521	2	FSM	ENSMUSG00000074884.13_ENSMUSG00000027245.12	ENSMUST00000134412.2	3105	2	4	-420	4	5	multi-exon	FALSE	canonical	3	5931	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGAGTCCTGGGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	121279852	121283906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121279923_121280455
ES.1993.1	chr1	+	158	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	178118120	178118278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178118100_178118300
ES.1993.2	chr1	+	1820	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178118122	178119942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178118100_178119900
ES.19930.1	chr2	+	2700	7	Fusion	ENSMUSG00000084407.2_ENSMUSG00000027242.15	novel	455	4	NA	NA	3340	0	multi-exon	FALSE	non_canonical	0	0	junction_6	16.6408132814075	129	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121319252	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_121319345_121321837_121321994_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374230_121374759
ES.19930.10	chr2	+	3095	14	NNC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	16	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATGTCTTTGAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	121337219	121375337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121373630_121374759
ES.19930.11	chr2	+	3686	14	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337232	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374230_121374759
ES.19930.12	chr2	+	4184	13	FSM	ENSMUSG00000027242.15	ENSMUST00000110602.9	4170	13	-14	0	-3	0	multi-exon	FALSE	canonical	2	6	junction_1	14.1958033704801	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337249	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121337330_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
ES.19930.13	chr2	+	4098	12	ISM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	51	3780	2	-3385	5prime_fragment	FALSE	canonical	3	31	junction_10	7.93673330389714	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTTCCTGATGTTGT	NA	False	NA	NA	False	ACTAAA	-30	NA	121337254	121370105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587
ES.19930.14	chr2	+	2570	9	FSM	ENSMUSG00000027242.15	ENSMUST00000132373.2	3155	9	19	566	2	10	multi-exon	FALSE	canonical	3	42	junction_4	5.85101486923423	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTAAGTTTGCACTGG	NA	False	NA	NA	False	AATAAA	-21	NA	121337254	121363280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766
ES.19930.15	chr2	+	3649	14	NNC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	121337256	121375338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374220_121374759
ES.19930.16	chr2	+	3602	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121340299	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374143_121374761
ES.19930.17	chr2	+	4984	9	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	-19	7813	-19	1831	intron_retention	FALSE	canonical	3	27	junction_1	9.78439446261239	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCGCTCTTGTTTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	121340309	121365677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766
ES.19930.18	chr2	+	3678	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121340312	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374230_121374759
ES.19930.19	chr2	+	3559	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121340313	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
ES.19930.2	chr2	+	366	1	Antisense	novelGene_ENSMUSG00000068479.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	121323038	121323404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121323000_121323400
ES.19930.20	chr2	+	6216	13	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-11	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	16.3622193550332	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATAATGTCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	121340317	121375336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
ES.19930.21	chr2	+	2279	10	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-10	10	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_9	17.5147204402116	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTAAGTTTGCACTGG	NA	False	NA	NA	False	AATAAA	-21	NA	121340318	121363280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121362221
ES.19930.22	chr2	+	3488	14	NNC	ENSMUSG00000027242.15	novel	2341	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.7213155719746	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121340323	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121340417_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374051_121374759
ES.19930.24	chr2	+	1334	1	NIC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	1010	-20598	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATGTTTAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	121341338	121342672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121341300_121342700
ES.19930.25	chr2	+	2808	8	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	17152	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.7910095741641	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121357480	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374230_121374759
ES.19930.26	chr2	+	8640	4	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	19055	0	intron_retention	FALSE	non_canonical	0	0	junction_3	22.8813364023074	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	108	False	NA	NA	False	AATAAA	-22	NA	121359383	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121366058_121367587_121367642_121372781_121374114_121374761
ES.19930.27	chr2	+	802	1	ISM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	35683	197	32558	-197	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGTTTTGCGTCAT	9221	False	NA	NA	False	NA	NA	NA	121372886	121373688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121372900_121373700
ES.19930.3	chr2	+	3642	14	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337187	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374143_121374761
ES.19930.4	chr2	+	3226	14	NNC	ENSMUSG00000027242.15	novel	2789	13	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	121337199	121375338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121373740_121374759
ES.19930.5	chr2	+	1858	10	NNC	ENSMUSG00000027242.15	novel	2315	11	NA	NA	-1	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	16.7648957167965	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTAAGTTTGCACTGG	NA	False	NA	NA	False	AATAAA	-21	NA	121337202	121363280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121362686
ES.19930.6	chr2	+	3598	14	NNC	ENSMUSG00000027242.15	novel	4170	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	15.000197237362	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337202	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781_121374114_121374761
ES.19930.7	chr2	+	4245	13	FSM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	0	-1456	0	0	multi-exon	FALSE	canonical	3	31	junction_10	8.00347146902865	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTTGAGTAATCTT	NA	False	NA	NA	False	AATAAA	-22	NA	121337203	121375341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
ES.19930.8	chr2	+	3778	12	ISM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	5	4146	5	-3751	5prime_fragment	FALSE	canonical	3	31	junction_10	7.93673330389714	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGGCTCAACAGTT	NA	False	NA	NA	False	NA	NA	NA	121337208	121369739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587
ES.19930.9	chr2	+	2422	12	ISM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	11	5496	11	4543	5prime_fragment	FALSE	canonical	3	31	junction_10	7.93673330389714	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATATAGCATGTTTTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	121337214	121368389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587
ES.19931.1	chr2	-	3985	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	68	-691	68	691	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTG	9263	False	NA	NA	False	NA	NA	NA	121304480	121290024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.10	chr2	-	2372	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	39	951	39	-951	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAACAAACAGTA	9234	False	NA	-39	True	NA	NA	NA	121304509	121291666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.12	chr2	-	1939	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	49	1374	49	-1374	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAGAAACAAAAGTCT	9244	False	NA	NA	False	ACTAAA	-15	NA	121304499	121292089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.14	chr2	-	1758	7	Fusion	ENSMUSG00000068479.6_ENSMUSG00000048222.4	novel	3362	7	NA	NA	4	-1569	multi-exon	FALSE	canonical	3	201	junction_1	92.2887979238121	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTTTTTTCTTT	NA	False	NA	-21	True	NA	NA	NA	121337142	121292284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_121292786_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.15	chr2	-	6113	1	NIC	ENSMUSG00000048222.4	novel	3362	7	NA	NA	65	-7655	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAGTAATGAATAAAAGTA	9260	False	NA	NA	False	NA	NA	NA	121304483	121298370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121298400_121304500
ES.19931.16	chr2	-	178	1	Intergenic	novelGene_16514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAAAGT	9943	False	NA	NA	False	NA	NA	NA	121303800	121303622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121303600_121303800
ES.19931.17	chr2	-	2280	1	Antisense	novelGene_ENSMUSG00000084407.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	121320976	121318696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_121318700_121321000
ES.19931.18	chr2	-	5477	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	8	-1287	8	1287	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGCCACATTAATTCT	NA	False	NA	NA	False	NA	NA	NA	121337138	121321104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.19	chr2	-	5087	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	37	1287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.593616567141	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGCCACATTAATTCT	NA	False	NA	NA	False	NA	NA	NA	121337109	121321104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121323362_121323722_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.2	chr2	-	4186	5	NIC	ENSMUSG00000048222.4	novel	3362	7	NA	NA	39	690	intron_retention	FALSE	canonical	3	438	junction_2	14.8408220796558	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	9234	False	NA	NA	False	NA	NA	NA	121304509	121290025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121292958_121295259_121295420_121297216_121297578_121300259_121300798_121304314
ES.19931.20	chr2	-	4431	7	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	4269	1281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.085895864698	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATGCACAGCCACATT	NA	False	NA	NA	False	NA	NA	NA	121332877	121321110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121323360_121323731_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812
ES.19931.22	chr2	-	4726	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	93	1273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.593616567141	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGCCAATGCACA	NA	False	NA	NA	False	NA	NA	NA	121337053	121321118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121323360_121324011_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.23	chr2	-	3945	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	18	144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.593616567141	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATTTAACTTTCATA	NA	False	NA	NA	False	AATAAA	-21	NA	121337128	121322247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121323354_121323732_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.24	chr2	-	4327	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	14	-143	14	143	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAAATTTAACTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	121337132	121322248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.25	chr2	-	4192	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	5	1	5	-1	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTGGCACATGCCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	121337141	121322392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.26	chr2	-	4052	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	18	128	18	-128	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTATGTCTCTTATCTA	NA	False	NA	NA	False	NA	NA	NA	121337128	121322519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.27	chr2	-	3634	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	18	546	18	-546	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGCTCAGGGCACTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	121337128	121322937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.28	chr2	-	3451	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	2	745	2	-745	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTACTAATCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121337144	121323136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.29	chr2	-	3042	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	18	-766	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.593616567141	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGACTCTCTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	121337128	121323157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121323360_121323731_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.3	chr2	-	3695	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	57	-390	57	390	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAACAACAACAAAAAAAAA	9252	False	NA	NA	False	NA	NA	NA	121304491	121290325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.30	chr2	-	3377	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	-26	847	-26	-847	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTGAACAAACTCAGAT	NA	False	NA	NA	False	NA	NA	NA	121337172	121323238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.31	chr2	-	3132	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	18	1048	18	-1048	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGGGGTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	121337128	121323439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.32	chr2	-	2800	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	8	1390	8	-1390	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTAATCCCTGCACT	NA	False	NA	44	True	NA	NA	NA	121337138	121323781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.33	chr2	-	2528	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	2	1668	2	-1668	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCGTGTGTGTGTGTGT	NA	False	NA	-5	True	NA	NA	NA	121337144	121324059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.34	chr2	-	1945	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	12	2241	12	-2241	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAGAAACAAAAGTCT	NA	False	NA	NA	False	ACTAAA	-15	NA	121337134	121324632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.35	chr2	-	2044	8	NNC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	16	-2340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.044441877014	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATTTGTGGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	121337130	121324731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121334090_121334293_121336943
ES.19931.36	chr2	-	1843	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	2	2353	2	-2353	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAACCTGTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	121337144	121324744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.37	chr2	-	1737	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	7	2454	7	-2454	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATGGTGTATTCTTTC	NA	False	NA	NA	False	NA	NA	NA	121337139	121324845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ES.19931.38	chr2	-	2569	2	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	46	8547	46	-8547	5prime_fragment	FALSE	canonical	3	409	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGTAATGAATAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	121337100	121330938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121333351_121336943
ES.19931.39	chr2	-	6163	1	NIC	ENSMUSG00000068479.6	novel	4198	7	NA	NA	45	-8547	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGTAATGAATAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	121337101	121330938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121330900_121337100
ES.19931.4	chr2	-	3515	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	49	-202	49	202	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGGCTCAGTGATTAAC	9244	False	NA	NA	False	AGTAAA	-19	NA	121304499	121290513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.40	chr2	-	1077	1	Genic_Genomic	ENSMUSG00000068479.6	novel	NA	NA	NA	NA	-3	-13681	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	121337149	121336072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_121336100_121337100
ES.19931.5	chr2	-	3254	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	60	48	60	-48	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGTGTCGAACAATGA	9255	False	NA	NA	False	NA	NA	NA	121304488	121290763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.6	chr2	-	2998	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	26	338	26	-338	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGGAACTAAGTCTAG	9221	False	NA	NA	False	NA	NA	NA	121304522	121291053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.7	chr2	-	2799	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	38	525	38	-525	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAAGTGTGGTTGAGCA	9233	False	NA	NA	False	NA	NA	NA	121304510	121291240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19931.8	chr2	-	2610	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	33	719	33	-719	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTCTTGAAGTTGAGAA	9228	False	NA	-2	True	AATAAA	-20	NA	121304515	121291434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ES.19932.1	chr2	+	175	1	Intergenic	novelGene_16515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAAAGCAATT	2480	False	NA	NA	False	NA	NA	NA	121407626	121407801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121407600_121407800
ES.19932.2	chr2	+	175	2	Antisense	novelGene_ENSMUSG00000027238.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACCGTA	2480	False	NA	NA	False	NA	NA	NA	121407626	121438945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121407750_121438893
ES.19932.3	chr2	+	178	1	Intergenic	novelGene_16517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACCGTA	842	False	NA	NA	False	NA	NA	NA	121438767	121438945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121438800_121438900
ES.19933.1	chr2	+	3088	1	Intergenic	novelGene_16519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAAGTGGAAGGACAT	NA	False	NA	NA	False	NA	NA	NA	121595831	121598919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121595800_121598900
ES.19934.1	chr2	-	3977	5	ISM	ENSMUSG00000027238.18	ENSMUST00000153932.2	673	7	1216	-3516	1216	-3	3prime_fragment	FALSE	canonical	3	16	junction_4	1.92028643696715	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGAATGGGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	121387822	121376012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797
ES.19934.2	chr2	-	2115	15	NNC	ENSMUSG00000027238.18	novel	2222	14	NA	NA	3397	0	intron_retention	FALSE	canonical	0	0	junction_13	9.62485091323709	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121614428	121378787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121610525_121610565_121614311
ES.19934.3	chr2	-	182	1	Intergenic	novelGene_16516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	2712	False	NA	NA	False	NA	NA	NA	121411118	121410936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121410900_121411100
ES.19934.4	chr2	-	128	1	Intergenic	novelGene_16518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAC	9018	False	NA	NA	False	NA	NA	NA	121542383	121542255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121542300_121542400
ES.19934.5	chr2	-	1980	1	Intergenic	novelGene_16520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121608203	121606223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121606200_121608200
ES.19934.6	chr2	-	250	1	Intergenic	novelGene_16521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTGAGTTGGGTATA	NA	False	NA	NA	False	NA	NA	NA	121608454	121608204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121608200_121608500
ES.19935.1	chr2	+	911	1	Intergenic	novelGene_16522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8262	False	NA	NA	False	NA	NA	NA	121629683	121630594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121629700_121630600
ES.19936.1	chr2	+	1776	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-46	2485	-46	38	multi-exon	TRUE	canonical	3	136	junction_8	32.2490309931942	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTTTTTGGTTACTAC	NA	False	NA	NA	False	NA	NA	NA	121697404	121764216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.10	chr2	+	3192	8	NIC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	-6155	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	71.5019622964636	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATATAAGAGCCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	121697428	121757988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121756041
ES.19936.100	chr2	+	4162	11	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	2	-130	combination_of_known_splicesites	FALSE	canonical	1	14	junction_10	120.1915554438	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTTGCTAGTA	NA	False	NA	NA	False	NA	NA	NA	121786968	121843942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121841043
ES.19936.101	chr2	+	1246	7	ISM	ENSMUSG00000033411.17	ENSMUST00000128883.8	1236	9	2	4669	2	-1280	5prime_fragment	FALSE	canonical	3	361	junction_3	40.3429740544194	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGAGACCCTGTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	121786968	121819595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270
ES.19936.102	chr2	+	3533	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.591181549406	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786968	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809527_121811641_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.103	chr2	+	4419	12	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	120.078830856378	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTGTACATTGTTT	NA	False	NA	NA	False	TATAAA	-28	NA	121786968	121844072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121841043
ES.19936.104	chr2	+	3159	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	2	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.10101240022	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGGTTGAGTGTTTTC	NA	False	NA	NA	False	AATGAA	-13	NA	121786968	121842744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807923_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.106	chr2	+	3618	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	2	70633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	110.589223396138	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCAATCAGTAAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	121786968	121914756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043_121843097_121914677
ES.19936.107	chr2	+	4510	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	3	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	114.881702440187	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTCAGTGATATGGAT	NA	False	NA	NA	False	TATAAA	-15	NA	121786969	121844059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834539_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.108	chr2	+	2715	12	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	3	-327	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	119.670829520049	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAGGAGTATGTCAGT	NA	False	NA	3	True	ATTAAA	-14	NA	121786969	121842542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807937_121811737_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.11	chr2	+	1312	7	NIC	ENSMUSG00000060227.16	novel	3475	8	NA	NA	-22	36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	84.3458488736833	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTTTTTTGGTTACT	NA	False	NA	NA	False	NA	NA	NA	121697428	121764214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121763958
ES.19936.111	chr2	+	4187	1	Intergenic	novelGene_16529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAACTGCACATGAAGG	NA	False	NA	NA	False	NA	NA	NA	121788654	121792841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121788700_121792800
ES.19936.112	chr2	+	3412	6	NIC	ENSMUSG00000033411.17	novel	1236	9	NA	NA	125	33	intron_retention	FALSE	canonical	3	361	junction_2	25.7106981624381	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTACTTTTAAGAACT	6050	False	NA	NA	False	NA	NA	NA	121799687	121824710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121819383_121823826
ES.19936.113	chr2	+	4361	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	145	-4	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	141.024229596667	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTCTGGGTTTTTTGT	6070	False	NA	NA	False	NA	NA	NA	121799707	121844119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121826488_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.114	chr2	+	2614	1	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-1801	-10770	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGAAAGGTCTGGCAG	1155	False	NA	NA	False	NA	NA	NA	121807491	121810105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121807500_121810100
ES.19936.115	chr2	+	176	1	Intergenic	novelGene_16531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGAGTGGAGAC	4835	False	NA	NA	False	NA	NA	NA	121811171	121811347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121811200_121811300
ES.19936.116	chr2	+	8515	6	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	18846	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.83359312089	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121828138	121843096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121828849_121828995_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.117	chr2	+	135	1	Intergenic	novelGene_16533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATACCTCAGAATAATTT	NA	False	NA	NA	False	NA	NA	NA	121828848	121828983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121828800_121829000
ES.19936.118	chr2	+	114	2	Intergenic	novelGene_16534	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATAAAATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	121828850	121850793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121828919_121850747
ES.19936.119	chr2	+	2522	1	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	31281	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121840573	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121840600_121843100
ES.19936.12	chr2	+	1648	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	-22	2406	-22	102	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAAATTTCACATTTT	NA	False	NA	NA	False	TTTAAA	-7	NA	121697428	121764280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ES.19936.120	chr2	+	909	1	Intergenic	novelGene_16536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	121849268	121850177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121849300_121850200
ES.19936.121	chr2	+	192	1	Intergenic	novelGene_16537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTATGCTGGCCAGGGG	NA	False	NA	NA	False	NA	NA	NA	121853271	121853463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121853300_121853500
ES.19936.122	chr2	+	1942	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	-105	3576	-105	-3576	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGTGTTATATCCCA	NA	False	NA	NA	False	AATAAA	-20	NA	121858921	121883503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.123	chr2	+	1417	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	-12	4008	-12	-4008	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTATCTCAGAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	121859014	121883071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.124	chr2	+	5408	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	4	1	4	-1	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTCTTTCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121859030	121887078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.125	chr2	+	2435	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	10	2968	10	-2968	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCAGGTACAGGCGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	121859036	121884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.126	chr2	+	993	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	20	4400	20	-4400	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTATCTTTGTGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	121859046	121882679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.127	chr2	+	3022	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	24	2367	24	-2367	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTAGTACTACTGTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	121859050	121884712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.128	chr2	+	4158	7	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	26	-3574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	563.767288475977	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTTATATCCCAAG	NA	False	NA	NA	False	AATAAA	-22	NA	121859052	121883505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859206_121859288_121860466_121876393_121876510_121876613_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.130	chr2	+	2164	9	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	39	-3031	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	435.933176501858	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAAAATGTATCACGTG	NA	False	NA	NA	False	AATAAA	-34	NA	121859065	121884048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447_121883112_121883290
ES.19936.132	chr2	+	1237	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	43	4133	43	-4133	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTTGAACTACTTCAT	NA	False	NA	NA	False	AATACA	-12	NA	121859069	121882946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.133	chr2	+	3181	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	49	2183	49	-2183	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGCTGCTTAAATTC	NA	False	NA	NA	False	AATATA	-13	NA	121859075	121884896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.134	chr2	+	2401	7	NIC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	-44	-4043	intron_retention	FALSE	canonical	3	888	junction_1	171.117568420727	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGAGGTGAGGATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	121859088	121883036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121882297_121882447
ES.19936.135	chr2	+	1913	9	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	-33	-3580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	545.843598822044	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATTTTGTGTTATAT	NA	False	NA	NA	False	AATAAA	-16	NA	121859099	121883499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880714_121880868_121880967_121881130_121882222_121882297_121882447
ES.19936.136	chr2	+	1065	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	73	4275	-33	-4275	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAACCTAAT	NA	False	NA	NA	False	ACTAAA	-10	NA	121859099	121882804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.137	chr2	+	2186	8	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	-31	-3576	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_2	417.962013702154	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGTGTTATATCCCA	NA	False	NA	NA	False	AATAAA	-20	NA	121859101	121883503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859206_121859288_121859817_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.138	chr2	+	1488	9	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	4	-3863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	541.746928348468	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCCTGTCTAGTTATT	NA	False	NA	NA	False	NA	NA	NA	121859136	121883216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859206_121859288_121859393_121870385_121870434_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ES.19936.139	chr2	+	2671	8	NNC	ENSMUSG00000027236.9	novel	594	2	NA	NA	374	-2969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	607.747530825498	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCAGGTACAGGCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	121859506	121884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121859817_121871636_121871692_121872062_121872155_121877916_121878032_121879112_121879313_121880967_121881130_121882222_121882297_121882447
ES.19936.14	chr2	+	2501	9	NNC	ENSMUSG00000060227.16	novel	4032	9	NA	NA	-22	22690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	92.3265265240711	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGATTGATAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	121697428	121789391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121763958_121765019_121789195
ES.19936.15	chr2	+	2669	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-22	22690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.7938677028003	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGATTGATAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	121697428	121789391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121789195
ES.19936.16	chr2	+	3978	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-21	112	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	76.5927179596366	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGGTTACATTAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	121697429	121766813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121766506_121766707
ES.19936.17	chr2	+	2445	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-21	4929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.233308705821	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121697429	121771630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121697689_121697814_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765019_121771444
ES.19936.18	chr2	+	3878	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	68.2422156732913	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTTGATTATATATATA	NA	False	NA	13	True	AATAAA	-22	NA	121697432	121766393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121764287_121764333
ES.19936.19	chr2	+	3840	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.0123445905201	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTGTTTCACAGTTT	NA	False	NA	-1	True	AATAAA	-8	NA	121697434	121766379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756110_121756210_121763958
ES.19936.2	chr2	+	2661	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-46	4922	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	88.3500333619729	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTGTAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	121697404	121771623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121742351_121742523_121756041_121756210_121763958_121765019_121771441
ES.19936.20	chr2	+	3744	9	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.0073954687136	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTTTGATTATATAT	NA	False	NA	10	True	AATAAA	-19	NA	121697438	121766390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733604_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.21	chr2	+	3709	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-12	518	-12	-164	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGACATTCTACAGT	NA	False	NA	NA	False	TATAAA	-20	NA	121697438	121766183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.22	chr2	+	2598	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-12	4929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.9846952820868	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121697438	121771630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121727377_121727492_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121763958_121765019_121771441
ES.19936.24	chr2	+	3916	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-8	307	-8	6	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGATTATATATATAT	NA	False	NA	14	True	AATAAA	-23	NA	121697442	121766394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.25	chr2	+	2557	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-4	4929	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	76.3342228639744	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121697446	121771630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958_121765019_121771441
ES.19936.26	chr2	+	2458	9	NNC	ENSMUSG00000060227.16	novel	4032	9	NA	NA	3	22690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	95.8956952892047	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGATTGATAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	121697453	121789391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121742351_121742523_121763958_121765019_121789195
ES.19936.29	chr2	+	3668	9	NNC	ENSMUSG00000060227.16	novel	4032	9	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	80.1919572027021	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTTTTGATTATATAT	NA	False	NA	10	True	AATAAA	-19	NA	121697482	121766390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736517_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ES.19936.3	chr2	+	3879	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	-46	199	-46	99	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTAAAAGACTAGGGT	NA	False	NA	107	True	AATAAA	-25	NA	121697404	121766487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ES.19936.30	chr2	+	3761	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-79	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.2422156732913	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATAAATGTTATCATT	NA	False	NA	73	True	ATTAAA	-2	NA	121697530	121766453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121697689_121697814_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.32	chr2	+	2648	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-40	69037	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	66.371756041256	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGTAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	121697569	121835738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121835503
ES.19936.33	chr2	+	4011	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-37	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.2422156732913	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTAATGTGGAAGCAG	NA	False	NA	NA	False	AATAAA	-24	NA	121697572	121766821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121766506_121766707
ES.19936.34	chr2	+	3587	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	143	302	-16	-4	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCACAGTTTTGATT	NA	False	NA	4	True	AATAAA	-13	NA	121697593	121766384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ES.19936.35	chr2	+	2564	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	155	1496	-4	1027	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAAGGCTATTATTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	121697605	121765205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.36	chr2	+	2312	9	NNC	ENSMUSG00000060227.16	novel	4032	9	NA	NA	0	4929	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	92.120759739594	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121697610	121771630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121763958_121765019_121771441
ES.19936.37	chr2	+	1280	1	Intergenic	novelGene_16524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGACAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	121706938	121708218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121706900_121708200
ES.19936.38	chr2	+	179	1	Intergenic	novelGene_16525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTAAACAA	1500	False	NA	NA	False	NA	NA	NA	121720007	121720186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121720000_121720200
ES.19936.39	chr2	+	378	1	Intergenic	novelGene_16526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATTAAACAACCAAA	1502	False	NA	NA	False	NA	NA	NA	121720009	121720387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121720000_121720400
ES.19936.4	chr2	+	2766	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-45	4929	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	67.9741862768507	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121697405	121771630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121771441
ES.19936.40	chr2	+	3341	9	ISM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	31827	313	-10	0	3prime_fragment	FALSE	canonical	3	136	junction_7	25.8719805001473	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121729277	121766388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.41	chr2	+	3286	8	ISM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	34211	313	2374	0	3prime_fragment	FALSE	canonical	3	136	junction_6	25.8835697629494	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121731661	121766388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.42	chr2	+	1985	10	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	2389	4922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.9936781766175	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTGTAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	121731676	121771623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742382_121742479_121742523_121756041_121756210_121763958_121765019_121771441
ES.19936.43	chr2	+	1991	8	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	2399	4921	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	81.566299563544	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATTGTAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	121731686	121771622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121731766_121733542_121733634_121736410_121736553_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121771441
ES.19936.44	chr2	+	2900	2	NNC	ENSMUSG00000060227.16	novel	3475	8	NA	NA	28338	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121757625	121766388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121759821_121765683
ES.19936.45	chr2	+	1833	1	Intergenic	novelGene_16527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGACCAGCATCACTGA	NA	False	NA	NA	False	NA	NA	NA	121775076	121776909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121775100_121776900
ES.19936.46	chr2	+	1178	1	Intergenic	novelGene_16528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	121777120	121778298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121777100_121778300
ES.19936.47	chr2	+	5068	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	-8	-7	-8	7	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	121786473	121844130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.48	chr2	+	4132	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	1	920	1	107	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAATTGTTGACAATG	NA	False	NA	118	True	NA	NA	NA	121786482	121843203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.49	chr2	+	7155	14	NNC	ENSMUSG00000033411.17	novel	3386	13	NA	NA	1	1681	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	156.6401295247	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGATGACATTTTTTC	NA	False	NA	16	True	NA	NA	NA	121786482	121845804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.5	chr2	+	2658	12	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-36	22710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6739046181639	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTCCAGATTAATCTA	NA	False	NA	NA	False	GATAAA	-6	NA	121697414	121789411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121697689_121697814_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121789195
ES.19936.50	chr2	+	4014	13	NNC	ENSMUSG00000033411.17	novel	3386	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.285844846354	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGCTCTTTCTCAAA	NA	False	NA	9	True	AATAAA	-19	NA	121786482	121843094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807817_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.51	chr2	+	2401	8	ISM	ENSMUSG00000033411.17	ENSMUST00000128883.8	1236	9	-482	-446	3	33	intron_retention	FALSE	canonical	3	361	junction_3	40.3110356085866	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTACTTTTAAGAACT	NA	False	NA	NA	False	NA	NA	NA	121786484	121824710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826
ES.19936.52	chr2	+	10618	12	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	15	1678	intron_retention	FALSE	canonical	3	27	junction_8	146.218279035034	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	13	True	NA	NA	NA	121786496	121845801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343
ES.19936.53	chr2	+	4235	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAG	NA	False	NA	NA	False	ATTAAA	-27	NA	121786499	121842898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.54	chr2	+	4093	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	142.36493651152	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786499	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121826488_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.55	chr2	+	6698	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	35	-1680	35	1680	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGATGACATTTTTT	NA	False	NA	15	True	NA	NA	NA	121786516	121845803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.56	chr2	+	4397	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	139.368907248684	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGCTCTTTCTCAAA	NA	False	NA	9	True	AATAAA	-19	NA	121786518	121843094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827927_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.57	chr2	+	6646	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	77	1680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.407032848956	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGATGACATTTTTT	NA	False	NA	15	True	NA	NA	NA	121786558	121845803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807813_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834621_121837343_121837471_121838201_121838298_121841043
ES.19936.58	chr2	+	3944	13	FSM	ENSMUSG00000033411.17	ENSMUST00000110578.8	3386	13	-332	-226	78	-1	multi-exon	FALSE	canonical	3	37	junction_3	105.582774268449	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786559	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.59	chr2	+	3388	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	90	1575	90	-321	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTATGTCAGTTAATTT	NA	False	NA	9	True	ATTAAA	-20	NA	121786571	121842548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.6	chr2	+	2599	12	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-32	4901	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.4934549817732	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	121697418	121771602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121697689_121697814_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121771441
ES.19936.60	chr2	+	3814	12	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	115	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	120.078830856378	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786596	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121841043
ES.19936.61	chr2	+	3667	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	178	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.589223396138	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTGAACCTAGTTAA	NA	False	NA	26	True	AATAAA	-36	NA	121786659	121843111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121786762_121786957_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.62	chr2	+	6455	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-135	1683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.770968763272	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATGACATTTTTTCAG	NA	False	NA	18	True	NA	NA	NA	121786756	121845806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807817_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.63	chr2	+	4048	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	12	19	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAACCTAGTTAATATC	NA	False	NA	30	True	AATAAA	-40	NA	121786903	121843115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.65	chr2	+	3398	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	443	1212	-16	42	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAGCATTTGCAATTCA	NA	False	NA	NA	False	ATTAAA	-40	NA	121786924	121842911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.67	chr2	+	3243	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-16	-325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.489275047495	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGGAGTATGTCAGTTA	NA	False	NA	5	True	ATTAAA	-16	NA	121786924	121842544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.69	chr2	+	4733	11	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-16	-2887	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	186.004946170794	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGTTGTTGTTGTTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	121786924	121831557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121826488_121827927_121828849_121828995
ES.19936.7	chr2	+	2755	11	NNC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-27	22690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	68.2422156732913	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGATTGATAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	121697423	121789391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958_121765019_121789195
ES.19936.70	chr2	+	4077	15	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	158.522016110813	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGCTCTTTCTCAAA	NA	False	NA	9	True	AATAAA	-19	NA	121786924	121843094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121826488_121827927_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.71	chr2	+	4653	10	NNC	ENSMUSG00000033411.17	novel	1236	9	NA	NA	-10	-2890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	165.967273287444	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGATTTGTTGTTGTTGT	NA	False	NA	NA	False	AGTAAA	-20	NA	121786930	121831554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828849_121828995
ES.19936.72	chr2	+	6687	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-6	1677	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	139.368907248684	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTTTGATGACATTT	NA	False	NA	12	True	NA	NA	NA	121786934	121845800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827927_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.73	chr2	+	5004	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	139.368907248684	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTCTGGGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	121786937	121844120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827927_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.74	chr2	+	6235	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	0	1676	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	114.73120761153	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTCTTTGATGACATT	NA	False	NA	11	True	NA	NA	NA	121786940	121845799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819305_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.75	chr2	+	6268	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	3	1684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	114.881702440187	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGACATTTTTTCAGC	NA	False	NA	19	True	NA	NA	NA	121786943	121845807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834438_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.76	chr2	+	6175	12	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	3	1680	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	120.078830856378	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGATGACATTTTTT	NA	False	NA	15	True	NA	NA	NA	121786943	121845803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121841043
ES.19936.78	chr2	+	6316	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	7	1678	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	166.78906353828	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	13	True	NA	NA	NA	121786947	121845801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819305_121819383_121823826_121823914_121826401_121826488_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.79	chr2	+	3521	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	114.73120761153	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786950	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819305_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.8	chr2	+	4039	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	-23	199	-23	114	multi-exon	FALSE	canonical	3	136	junction_8	32.2490309931942	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTGGGCTGGTGAGATG	NA	False	NA	NA	False	AATAAA	-40	NA	121697427	121766502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.81	chr2	+	6991	12	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-9	1677	intron_retention	FALSE	canonical	3	334	junction_9	42.7355891326234	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTTTGATGACATTT	NA	False	NA	12	True	NA	NA	NA	121786951	121845800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121838298_121841043
ES.19936.82	chr2	+	3201	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	473	1379	-6	-125	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCAGGTTGAGTGTTTTC	NA	False	NA	NA	False	AATGAA	-13	NA	121786954	121842744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.84	chr2	+	1651	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	473	2929	-6	-10	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGCATTTTTGTACC	NA	False	NA	NA	False	AAAACA	-16	NA	121786954	121841194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.86	chr2	+	6337	14	NNC	ENSMUSG00000033411.17	novel	3543	13	NA	NA	-6	1678	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	176.391811051186	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	13	True	NA	NA	NA	121786954	121845801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807815_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121826488_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.87	chr2	+	3432	14	NNC	ENSMUSG00000033411.17	novel	3543	13	NA	NA	-6	29	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	153.111128764304	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAG	NA	False	NA	NA	False	ATTAAA	-27	NA	121786954	121842898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121790127_121790209_121799550_121799761_121807815_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.88	chr2	+	6277	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-6	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	115.090061352934	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	13	True	NA	NA	NA	121786954	121845801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841024
ES.19936.89	chr2	+	4995	14	NNC	ENSMUSG00000033411.17	novel	3543	13	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	157.401495447886	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATTTCTGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	121786954	121844117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807815_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.9	chr2	+	3868	9	NIC	ENSMUSG00000060227.16	novel	4215	10	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.0898992142006	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCACAGTTTTGATTAT	NA	False	NA	6	True	AATAAA	-15	NA	121697427	121766386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121698013_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ES.19936.90	chr2	+	3552	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.077109809887	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGCTCTTTCTCAAA	NA	False	NA	9	True	AATAAA	-19	NA	121786954	121843094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807808_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834438_121834543_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.91	chr2	+	6262	13	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-4	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.078837710888	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGATGACATTTT	NA	False	NA	13	True	NA	NA	NA	121786956	121845801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819389_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.92	chr2	+	5487	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	138.45884612767	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCTCTTTCTCAAAATT	NA	False	NA	12	True	AATAAA	-22	NA	121786957	121843097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121826401_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19936.95	chr2	+	4273	12	NIC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	334	junction_9	42.7355891326234	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGCTCTTTCTCAAAA	NA	False	NA	10	True	AATAAA	-20	NA	121786964	121843095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121838298_121841043
ES.19936.98	chr2	+	4223	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	485	345	0	-294	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTGACTTTTAAGACA	NA	False	NA	NA	False	ATTAAA	-22	NA	121786966	121843778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ES.19937.1	chr2	+	156	1	Intergenic	novelGene_16541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	121946913	121947069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_121946900_121947100
ES.19938.1	chr2	+	3062	1	Antisense	novelGene_ENSMUSG00000027233.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAATAAAAGC	1100	False	NA	NA	False	NA	NA	NA	121957757	121960819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_121957800_121960800
ES.19939.1	chr2	+	666	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	-1	195	-1	-195	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCTCTGTACTTCTCA	NA	False	NA	NA	False	AATAAA	-33	NA	121978165	121983369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ES.19939.2	chr2	+	847	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	-1	14	-1	-14	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121978165	121983550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ES.1994.1	chr1	+	107	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACTGTGATAGAATGT	NA	False	NA	NA	False	AATAAA	-34	NA	178127641	178127748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178127600_178127700
ES.19940.1	chr2	+	178	1	Intergenic	novelGene_16542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATAAATGTA	NA	False	NA	NA	False	NA	NA	NA	122012170	122012348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_122012200_122012300
ES.19941.1	chr2	-	1619	2	Antisense	novelGene_ENSMUSG00002076932.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACCAAACCAAAACA	NA	False	NA	NA	False	NA	NA	NA	121864333	121664220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_121664272_121862765
ES.19941.10	chr2	-	7938	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	12	-279	1	279	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCATTACTACAAATAAA	6991	False	NA	NA	False	AATAAA	-12	NA	121948855	121883721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.11	chr2	-	7677	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTGCTGAGGAAATC	6973	False	NA	NA	False	AATAAA	-22	NA	121948873	121884000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.12	chr2	-	7611	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	31.799358657768	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTGCTGAGGAAATC	6981	False	NA	NA	False	AATAAA	-22	NA	121948865	121884000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890238_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.13	chr2	-	7172	37	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	33.6657957349761	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTACTGCTGAGGAAAT	6991	False	NA	NA	False	AATAAA	-21	NA	121948855	121884001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.14	chr2	-	7449	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	-24	246	-24	-246	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCATACTGCACTAGTC	6955	False	NA	19	True	NA	NA	NA	121948891	121884246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.15	chr2	-	5443	31	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	22	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	37.5665483582875	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCATACTGCACTAGTC	7012	False	NA	19	True	NA	NA	NA	121948834	121884246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932122_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.16	chr2	-	4233	12	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	50661	-268	intron_retention	TRUE	non_canonical	0	0	junction_11	42.6001978810443	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTTGAAAAGCCCAGA	NA	False	NA	-3	True	AATAAA	-24	NA	121898116	121884268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121897044_121897095
ES.19941.18	chr2	-	4117	23	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	30146	-269	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	32.6515854600944	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTTGAAAAGCCCAG	NA	False	NA	-4	True	AATAAA	-23	NA	121918631	121884269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613
ES.19941.19	chr2	-	1931	11	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	52956	-269	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	41.9271988093648	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTTGAAAAGCCCAG	NA	False	NA	-4	True	AATAAA	-23	NA	121895821	121884269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890238_121890319_121890651_121890851_121891402_121891543_121895389
ES.19941.2	chr2	-	175	1	Intergenic	novelGene_16523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAACAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	121701354	121701179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121701200_121701400
ES.19941.20	chr2	-	7349	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	-24	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.7416721322704	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTTGAAAAGCCCAG	6955	False	NA	-4	True	AATAAA	-23	NA	121948891	121884269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121885926_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.22	chr2	-	3221	10	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	55599	-271	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	46.2676059249308	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTGAGTTGAAAAGCCC	NA	False	NA	-6	True	AATAAA	-21	NA	121893178	121884271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888793_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402
ES.19941.23	chr2	-	5020	28	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	1	-271	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	39.2512570460898	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTGAGTTGAAAAGCCC	6991	False	NA	-6	True	AATAAA	-21	NA	121948855	121884271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.24	chr2	-	7203	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	38	-274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	33.007281088651	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTTGAGTTGAAAAG	7028	False	NA	-9	True	AATAAA	-18	NA	121948818	121884274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905920_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.25	chr2	-	7345	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	23	-274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	32.4161995524672	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTTGAGTTGAAAAG	7013	False	NA	-9	True	AATAAA	-18	NA	121948833	121884274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121885985_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.26	chr2	-	7556	41	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	-5	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	36.112108426399	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	6985	False	NA	-10	True	AATAAA	-17	NA	121948861	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913534_121913701_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.27	chr2	-	7516	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	1	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	32.9253533840339	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	6991	False	NA	-10	True	AATAAA	-17	NA	121948855	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905226_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.29	chr2	-	7251	39	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	-4	-275	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	33.4560633031615	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	6986	False	NA	-10	True	AATAAA	-17	NA	121948860	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.3	chr2	-	153	1	Intergenic	novelGene_16530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATAAATAAATTTA	6250	False	NA	NA	False	NA	NA	NA	121800814	121800661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121800700_121800800
ES.19941.30	chr2	-	7925	46	Fusion	ENSMUSG00000033396.14_ENSMUSG00000027233.5	novel	7671	40	NA	NA	-7422	-275	multi-exon	FALSE	canonical	0	0	junction_8	34.5284566841273	286	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	NA	False	NA	-10	True	AATAAA	-17	NA	121956289	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890316_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ES.19941.31	chr2	-	7258	39	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	27	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.259286178515	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	7017	False	NA	-10	True	AATAAA	-17	NA	121948829	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884856_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121901345_121901547_121902535_121902791_121903326_121903487_121904980_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.32	chr2	-	7266	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	3	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	32.1420867549059	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	7072	False	NA	-10	True	AATAAA	-17	NA	121948774	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890688_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.33	chr2	-	7333	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	1	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	32.8398180402265	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCATTTGAGTTGAAAA	6991	False	NA	-10	True	AATAAA	-17	NA	121948855	121884275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901496_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.34	chr2	-	5777	19	NIC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	36401	-276	intron_retention	FALSE	canonical	3	79	junction_4	19.7844090006796	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCATTTGAGTTGAAA	NA	False	NA	-11	True	AATAAA	-16	NA	121912376	121884276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335
ES.19941.35	chr2	-	3396	17	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	45289	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.027165796707	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCATTTGAGTTGAAA	NA	False	NA	-11	True	AATAAA	-16	NA	121903488	121884276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890031_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326
ES.19941.37	chr2	-	7370	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	214	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	33.0309758392258	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCCCATTTGAGTTGAA	7283	False	NA	-12	True	AATAAA	-15	NA	121948563	121884277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948321
ES.19941.39	chr2	-	1379	9	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	57949	-278	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	58.3329613083375	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCCCATTTGAGTTGA	NA	False	NA	-13	True	AATAAA	-14	NA	121890828	121884278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888793_121888932_121889902_121890037_121890180_121890319_121890688
ES.19941.4	chr2	-	178	1	Intergenic	novelGene_16532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	121817211	121817033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121817000_121817200
ES.19941.40	chr2	-	180	1	Intergenic	novelGene_16540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAAGATTGTTATA	NA	False	NA	NA	False	NA	NA	NA	121887565	121887385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121887400_121887600
ES.19941.41	chr2	-	5034	2	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	55795	-3746	intron_retention	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTAGGCCTTTCAGG	NA	False	NA	NA	False	AAGAAA	-2	NA	121892982	121887746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121889350_121889551
ES.19941.42	chr2	-	6735	35	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	-1	-4639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.5711358833794	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCAGCCTTTTACCCC	6989	False	NA	NA	False	TATAAA	-15	NA	121948857	121888639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918815_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.43	chr2	-	3110	2	Genic_Genomic	ENSMUSG00000033396.14	novel	7671	40	NA	NA	56288	-5177	multi-exon	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCCCACTGCAATGAG	NA	False	NA	NA	False	NA	NA	NA	121892489	121889177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_121889350_121889551
ES.19941.44	chr2	-	5004	29	NNC	ENSMUSG00000033396.14	novel	2555	13	NA	NA	-38	-14622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7771256454342	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGATTTCATGTGCT	7031	False	NA	NA	False	NA	NA	NA	121948815	121898622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121898797_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.45	chr2	-	4547	7	NNC	ENSMUSG00000033396.14	novel	1813	6	NA	NA	67	2981	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.1182371050918	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTCATGGTGTTTT	7136	False	NA	NA	False	NA	NA	NA	121948710	121935165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121936846_121936946_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.46	chr2	-	3733	7	NNC	ENSMUSG00000033396.14	novel	1813	6	NA	NA	-6	2004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.1182371050918	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTTTTCCAGTACTA	6973	False	NA	NA	False	AATAAA	-27	NA	121948873	121936142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121936846_121936946_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.47	chr2	-	1834	6	FSM	ENSMUSG00000033396.14	ENSMUST00000135847.2	1813	6	-4	-17	-4	17	multi-exon	FALSE	canonical	3	87	junction_3	7.08237248385031	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATGTGTGTGGTG	6986	False	NA	NA	False	NA	NA	NA	121948860	121938129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ES.19941.48	chr2	-	2106	13	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60065	988	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.1880451404374	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGAGATCTATTGGT	NA	False	NA	NA	False	AATAGA	-11	NA	121956605	121949600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950243_121950298_121950495_121950791_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
ES.19941.49	chr2	-	2446	10	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60396	770	intron_retention	TRUE	non_canonical	0	0	junction_1	46.8946810535173	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTTTTCAATAGCTC	NA	False	NA	NA	False	NA	NA	NA	121956274	121949818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950242_121950297_121950499_121950790_121950930_121951640_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955661_121955750_121955872_121956199
ES.19941.5	chr2	-	312	1	Intergenic	novelGene_16535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	121840109	121839797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121839800_121840100
ES.19941.50	chr2	-	1790	12	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60389	768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.7681721409746	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGCCTTTTCAATAGC	NA	False	NA	NA	False	NA	NA	NA	121956281	121949820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950243_121950298_121950495_121950791_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ES.19941.51	chr2	-	1185	9	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	61021	321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.2314844863153	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	197	False	NA	NA	False	NA	NA	NA	121955649	121950267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950495_121950791_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562
ES.19941.52	chr2	-	1749	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60049	-262	60049	262	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	121956621	121950326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
ES.19941.53	chr2	-	2405	19	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.9165997859387	94	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTGTTGCCAGACTTT	NA	False	NA	0	True	AATAAA	-20	NA	122016681	121950588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581_121956675_121957116_121957227_121957950_121958032_121959237_121959447_121959981_121960069_121960442_121960497_121961056_121961157_122009575_122009730_122016611
ES.19941.54	chr2	-	1474	10	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60449	-7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	35.6623396475302	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGCTTCCGTGTTGCC	NA	False	NA	-7	True	AATAAA	-13	NA	121956221	121950595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956033
ES.19941.55	chr2	-	1381	10	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60054	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.7443361797254	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTGCTTCCGTGTTGC	NA	False	NA	-8	True	AATAAA	-12	NA	121956616	121950596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950930_121951640_121951812_121952264_121952360_121954198_121954340_121955099_121955234_121955327_121955427_121955562_121955661_121955750_121955872_121956199_121956354_121956581
ES.19941.56	chr2	-	3103	5	NIC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60438	-8	intron_retention	FALSE	canonical	3	96	junction_4	9.39414711402797	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTGCTTCCGTGTTGC	NA	False	NA	-8	True	AATAAA	-12	NA	121956232	121950596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327
ES.19941.57	chr2	-	1554	11	NNC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60063	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	35.234074416678	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTGCTTCCGTGTTGC	NA	False	NA	-8	True	AATAAA	-12	NA	121956607	121950596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956443_121956581
ES.19941.59	chr2	-	2162	8	NIC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	60396	-9	intron_retention	FALSE	canonical	3	89	junction_7	15.0753210951691	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGTTGCTTCCGTGTTG	NA	False	NA	-9	True	AATAAA	-11	NA	121956274	121950597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_121950930_121951640_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750
ES.19941.6	chr2	-	7371	40	NNC	ENSMUSG00000033396.14	novel	7671	40	NA	NA	3596	28701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.8639483823329	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTTGTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	121945181	121855299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_121855355_121884004_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900345_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088
ES.19941.61	chr2	-	1383	11	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	60036	117	60036	-117	3prime_fragment	FALSE	canonical	3	37	junction_10	25.8797217913949	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTTTGTAAGTTTGG	NA	False	NA	0	True	ATTAAA	-22	NA	121956634	121950705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121950930_121951640_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956581
ES.19941.63	chr2	-	2853	2	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	0	56347	0	-56347	5prime_fragment	FALSE	canonical	3	24	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAACACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122016670	122006935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_122009730_122016611
ES.19941.64	chr2	-	1635	2	ISM	ENSMUSG00000027233.5	ENSMUST00000028665.5	2434	18	21	57544	21	-57544	5prime_fragment	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGTAAATAAATAAATGAG	NA	False	NA	NA	False	NA	NA	NA	122016649	122008132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_122009730_122016611
ES.19941.65	chr2	-	6863	1	NIC	ENSMUSG00000027233.5	novel	2434	18	NA	NA	1	-59218	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCAGATGTGAAAATCC	NA	False	NA	NA	False	NA	NA	NA	122016669	122009806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_122009800_122016700
ES.19941.7	chr2	-	147	1	Intergenic	novelGene_16538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121868302	121868155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121868200_121868300
ES.19941.8	chr2	-	238	2	Intergenic	novelGene_16539	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGATAGATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	121889543	121876169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_121876358_121889493
ES.19941.9	chr2	-	4930	22	ISM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	34823	-542	34733	542	3prime_fragment	FALSE	canonical	3	79	junction_4	18.5616579914697	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCAGATGTCATAATTG	NA	False	NA	NA	False	ATTAAA	-18	NA	121914044	121883458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880
ES.19942.1	chr2	+	1839	4	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	43.2075096353503	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1939	False	NA	NA	False	AATAAA	-9	NA	122016746	122036872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122028866_122028956_122035291
ES.19942.10	chr2	+	501	5	NNC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	12	4829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.7834105212521	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCCAGACTATGAAATAT	1957	False	NA	NA	False	AATAAA	-21	NA	122016764	122041707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122041520
ES.19942.11	chr2	+	807	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	91	310	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACTGTAAATGTTTAT	2036	False	NA	NA	False	AATAAA	-14	NA	122016843	122035752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
ES.19942.12	chr2	+	2138	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	92	-4	92	4	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	2037	False	NA	NA	False	AATAAA	-19	NA	122016844	122036882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.13	chr2	+	2058	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	100	-6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	51.9055632856441	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2045	False	NA	NA	False	AATAAA	-9	NA	122016852	122036872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122017027_122018390_122018531_122023712_122023787_122028866_122028956_122035291
ES.19942.14	chr2	+	1964	5	FSM	ENSMUSG00000027229.6	ENSMUST00000149861.2	448	5	-86	-1430	-86	-6	multi-exon	FALSE	canonical	3	28	junction_1	43.0486643230658	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	2061	False	NA	NA	False	AATAAA	-9	NA	122016868	122036872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.15	chr2	+	1876	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	-55	-1	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTTCTCAAAGTGA	2092	False	NA	NA	False	AATAAA	-14	NA	122016899	122036877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
ES.19942.16	chr2	+	2171	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	-47	162	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	51.9055632856441	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAGGAAAGGATTTAT	2100	False	NA	NA	False	NA	NA	NA	122016907	122037040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122017027_122018390_122018531_122023712_122023787_122028866_122028956_122035291
ES.19942.17	chr2	+	1980	4	NIC	ENSMUSG00000027229.6	novel	448	5	NA	NA	-4	154	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	28.5228952870419	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAATTTAAGAGGAAA	2143	False	NA	NA	False	NA	NA	NA	122016950	122037032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122017027_122023712_122023787_122028866_122028956_122035291
ES.19942.18	chr2	+	1787	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	208	231	6	-231	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCCTGAAACATTAA	2153	False	NA	NA	False	AATAAA	-16	NA	122016960	122036647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.19	chr2	+	1172	2	Intergenic	novelGene_16543	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCATTGGTTCTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	122026532	122028785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_122026929_122028009
ES.19942.2	chr2	+	1967	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1947	False	NA	NA	False	AATAAA	-9	NA	122016754	122036872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.20	chr2	+	5921	2	Genic_Genomic	ENSMUSG00000027229.6	novel	2115	7	NA	NA	12665	4	multi-exon	TRUE	canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	987	False	NA	NA	False	AATAAA	-19	NA	122029619	122036882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_122029979_122031320
ES.19942.21	chr2	+	4326	2	Genic_Genomic	ENSMUSG00000027229.6	novel	2115	7	NA	NA	13829	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAAATGTTTCTCA	2151	False	NA	NA	False	AATAAA	-8	NA	122030783	122036871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_122030878_122032639
ES.19942.3	chr2	+	2047	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	46.4439447075719	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATGTTTCTCAAAG	1947	False	NA	NA	False	AATAAA	-11	NA	122016754	122036874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122018390_122018531_122023712_122023787_122028866_122028956_122035291
ES.19942.4	chr2	+	986	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	2	1127	2	309	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAACTGTAAATGTTTA	1947	False	NA	NA	False	AATAAA	-13	NA	122016754	122035751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.5	chr2	+	587	6	NNC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-11258	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	26.1335034008072	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAATCATTAA	1947	False	NA	NA	False	NA	NA	NA	122016754	122024184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122016834_122016944_122017027_122021087_122021150_122021649_122021790_122023712_122023787_122024034
ES.19942.6	chr2	+	1716	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	2	-195	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTATCTTAGTCATG	1947	False	NA	NA	False	ATTAAA	-16	NA	122016754	122036683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
ES.19942.7	chr2	+	783	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	3	309	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAACTGTAAATGTTTA	1948	False	NA	NA	False	AATAAA	-13	NA	122016755	122035751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
ES.19942.8	chr2	+	2114	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	5	-4	5	4	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTCAAAGTGATTATA	1950	False	NA	NA	False	AATAAA	-19	NA	122016757	122036882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ES.19942.9	chr2	+	1900	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAATGTTTCTCAA	1952	False	NA	NA	False	AATAAA	-9	NA	122016759	122036872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
ES.19943.1	chr2	+	179	1	Intergenic	novelGene_16544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122046085	122046264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_122046100_122046300
ES.19944.1	chr2	+	178	1	FSM	ENSMUSG00000070692.7	ENSMUST00000117447.2	399	1	238	-17	238	17	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGCCTCACAG	NA	False	NA	-4	True	AATAAA	-17	NA	122050711	122050889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122050700_122050900
ES.19945.1	chr2	+	2335	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	22	-5	22	5	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTGTGCCTGTTTA	NA	False	NA	21	True	AATAAA	-24	NA	122065251	122095826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ES.19945.10	chr2	+	4571	28	NIC	ENSMUSG00000033268.9	novel	5267	33	NA	NA	4116	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1.34969386357693	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTCTTTTTTGCT	701	False	NA	NA	False	AATAAA	-14	NA	122150268	122178451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122150470_122151190_122151252_122151342_122151440_122153700_122153792_122154509_122154613_122154832_122155006_122156463_122156640_122156899_122157019_122157559_122157698_122158340_122158455_122159170_122159371_122160022_122160209_122163491_122163718_122163882_122163977_122164183_122164360_122166316_122166387_122166770_122166897_122167732_122167912_122168069_122168301_122168797_122168898_122169105_122169156_122170555_122170684_122174545_122174700_122175059_122175293_122175522_122175682_122176728_122176885_122176978_122177108_122177750
ES.19945.2	chr2	+	1308	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	29	1015	29	-1015	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGCCTAAGAGGAGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	122065258	122094806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ES.19945.3	chr2	+	2443	10	NNC	ENSMUSG00000027227.8	novel	2352	9	NA	NA	57	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	54.4442176866026	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCGTATGTGGTTTGTG	NA	False	NA	13	True	AATAAA	-16	NA	122065286	122095818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122065440_122076962_122076997_122079279_122079445_122080596_122080718_122083637_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ES.19945.5	chr2	+	1374	1	NIC	ENSMUSG00000027227.8	novel	2352	9	NA	NA	92	-29126	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCGTGTGCCACCACTG	NA	False	NA	NA	False	NA	NA	NA	122065321	122066695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122065300_122066700
ES.19945.6	chr2	+	2143	8	ISM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	11732	0	11732	0	3prime_fragment	FALSE	canonical	3	111	junction_2	11.1976673955802	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTATGTGGTTTGTGCCT	NA	False	NA	16	True	AATAAA	-19	NA	122076961	122095821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ES.19945.7	chr2	+	1663	4	ISM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	24315	2	24315	-2	3prime_fragment	FALSE	canonical	3	124	junction_3	7.71722460186015	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTATGTGGTTTGTGC	NA	False	NA	14	True	AATAAA	-17	NA	122089544	122095819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122089612_122090660_122090837_122093668_122093791_122094521
ES.19945.8	chr2	+	1623	5	NNC	ENSMUSG00000027227.8	novel	2352	9	NA	NA	25472	58497	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.6867566561175	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTCCAACACATCGG	NA	False	NA	NA	False	AATAAA	-29	NA	122090701	122154318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122090837_122093668_122093791_122094521_122095821_122118789_122118823_122154284
ES.19945.9	chr2	+	5380	34	NNC	ENSMUSG00000033268.9	novel	5267	33	NA	NA	-1870	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.31110955471418	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTCTTTTTTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	122144282	122178452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122144377_122146132_122146242_122148399_122148484_122148868_122149034_122149917_122150106_122150267_122150470_122150623_122150791_122151190_122151252_122151342_122151440_122153700_122153792_122154509_122154613_122154832_122155006_122156463_122156640_122156899_122157019_122157559_122157698_122158340_122158455_122159170_122159371_122160022_122160209_122163491_122163718_122163882_122163977_122164183_122164360_122166316_122166387_122166770_122166897_122167732_122167912_122168069_122168301_122168797_122168898_122169105_122169156_122170555_122170684_122174545_122174700_122175059_122175293_122175522_122175682_122176728_122176885_122176978_122177108_122177750
ES.19946.1	chr2	-	2524	16	ISM	ENSMUSG00000068452.9	ENSMUST00000053734.6	5744	32	1314	9832	1314	-6371	internal_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACATTGCTCTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	122127332	122119559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_122119867_122119948_122120175_122121076_122121263_122121544_122121748_122121921_122122036_122122292_122122431_122122739_122122859_122123072_122123249_122123784_122123949_122124471_122124575_122125069_122125161_122125565_122125663_122125774_122125836_122126475_122126643_122126798_122127001_122127162
ES.19947.1	chr2	+	6878	1	Antisense	novelGene_ENSMUSG00000033256.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTTTCCTGGAGGAGC	4505	False	NA	NA	False	NA	NA	NA	122190781	122197659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_122190800_122197700
ES.19948.1	chr2	+	1991	2	Intergenic	novelGene_16545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	122199732	122213575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_122199797_122211648
ES.19948.2	chr2	+	1777	4	Antisense	novelGene_ENSMUSG00000088506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCCCACTAATACTT	NA	False	NA	NA	False	AATAAA	-13	NA	122199741	122219665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_122199797_122215974_122216114_122216825_122216943_122218199
ES.19948.3	chr2	+	3646	5	Antisense	novelGene_ENSMUSG00000088506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATGCCCCACTAATA	NA	False	NA	NA	False	AATAAA	-10	NA	122199763	122219662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_122199797_122211648_122213544_122215974_122216114_122216825_122216997_122218254
ES.19948.4	chr2	+	3653	5	Antisense	novelGene_ENSMUSG00000088506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGCCCCACTAATACT	NA	False	NA	NA	False	AATAAA	-12	NA	122199764	122219664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_122199797_122211648_122213544_122215974_122216114_122216825_122216943_122218194
ES.19949.1	chr2	-	3937	5	NIC	ENSMUSG00000033256.15	novel	1557	6	NA	NA	-3	0	intron_retention	TRUE	canonical	3	69	junction_2	32.4374397879981	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCCGAGCATCCACTCG	NA	False	NA	-11	True	TATAAA	-38	NA	122199621	122179373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122190071_122199127
ES.19949.11	chr2	-	1555	5	NIC	ENSMUSG00000033256.15	novel	1566	6	NA	NA	96	-34	intron_retention	FALSE	canonical	3	75	junction_4	29.1493996507647	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGGCACCGAGGAGAG	NA	False	NA	-13	True	AATAAA	-12	NA	122199522	122179642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122199127
ES.19949.12	chr2	-	1452	5	ISM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	-11	4323	-11	-3947	5prime_fragment	FALSE	canonical	3	35	junction_1	31.767711595266	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCTAGCATGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	122199629	122183931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
ES.19949.2	chr2	-	1784	6	FSM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	-11	-234	-11	-1	multi-exon	FALSE	canonical	3	35	junction_2	39.8216021777125	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCCGAGCATCCACTC	NA	False	NA	-12	True	TATAAA	-37	NA	122199629	122179374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
ES.19949.4	chr2	-	1463	5	NNC	ENSMUSG00000033256.15	novel	1431	6	NA	NA	-1071	-6	intron_retention	TRUE	canonical	0	0	junction_4	56.8000880281008	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	False	NA	-17	True	TATAAA	-32	NA	122200714	122179379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122200674
ES.19949.5	chr2	-	1914	5	NIC	ENSMUSG00000033256.15	novel	1539	6	NA	NA	0	-6	intron_retention	FALSE	canonical	3	75	junction_4	29.1493996507647	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	False	NA	-17	True	TATAAA	-32	NA	122199618	122179379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122199127
ES.19949.6	chr2	-	1230	6	NNC	ENSMUSG00000033256.15	novel	1431	6	NA	NA	-1036	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	66.5804776191941	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	False	NA	-17	True	TATAAA	-32	NA	122200679	122179379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122180021_122184245_122184366_122187563_122187771_122189928_122190071_122200360_122200394_122200592
ES.19949.7	chr2	-	1382	6	NNC	ENSMUSG00000033256.15	novel	1539	6	NA	NA	-822	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	54.17896270694	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	False	NA	-17	True	TATAAA	-32	NA	122200465	122179379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122200360
ES.19949.9	chr2	-	1428	7	NNC	ENSMUSG00000033256.15	novel	1539	6	NA	NA	-11	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	50.7958878475632	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGAGAGCCTGAGGAG	NA	False	NA	-4	True	AATAAA	-21	NA	122199629	122179633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127_122199349_122199445
ES.1995.1	chr1	-	195	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGAAGAAAATGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	178140684	178140489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_178140500_178140700
ES.19950.1	chr2	-	1868	7	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	7666	6	-4825	-6	3prime_fragment	FALSE	canonical	2	6	junction_3	2.75378527364305	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGAGTTTGATTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	122434118	122424953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062
ES.19950.2	chr2	-	2275	10	NNC	ENSMUSG00000027199.15	novel	2389	9	NA	NA	29	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.31477507532169	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTATGAGTTTGATT	NA	False	NA	NA	False	AATAAA	-17	NA	122441755	122424956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122425383_122425458_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
ES.19950.3	chr2	-	1895	10	NNC	ENSMUSG00000027199.15	novel	2389	9	NA	NA	29	-392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.31477507532169	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGACTTTCCATGAAT	NA	False	NA	NA	False	TTTAAA	-41	NA	122441755	122425339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122425454_122425526_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
ES.19951.1	chr2	+	175	1	Intergenic	novelGene_16546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122452037	122452212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_122452000_122452200
ES.19952.1	chr2	+	2267	8	NNC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	-13	182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4.86553896169326	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTCAGGAGAGTTATT	NA	False	NA	20	True	AATAAA	-16	NA	122461106	122474932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122472613_122472745_122473758_122473885_122474529_122474753_122474834
ES.19952.2	chr2	+	2115	7	NIC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	3.21455025366432	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTCATATGAAGTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	122461117	122474709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122472613_122472745_122473758_122473885_122474529
ES.19952.3	chr2	+	2438	9	NNC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	7	182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.46514277487294	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTCAGGAGAGTTATT	NA	False	NA	20	True	AATAAA	-16	NA	122461126	122474932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529_122474753_122474836
ES.19952.4	chr2	+	1590	3	NNC	ENSMUSG00000118663.1	novel	4326	7	NA	NA	7	199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGGCCGTCTAT	NA	False	NA	37	True	AATAAA	-33	NA	122461126	122474949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122462241_122462999_122463346_122474819
ES.19952.5	chr2	+	2445	9	NNC	ENSMUSG00000118663.1	novel	2347	8	NA	NA	-7	195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.46514277487294	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATTTCTGTTTGGCCGT	NA	False	NA	33	True	AATAAA	-29	NA	122461138	122474945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529_122474753_122474830
ES.19952.7	chr2	+	3620	2	NIC	ENSMUSG00000118663.1	novel	4326	7	NA	NA	9306	-1	intron_retention	FALSE	canonical	3	12	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGAAGTAGTTTGCAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	122470451	122474716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122473885_122474529
ES.19953.1	chr2	+	611	4	NIC	ENSMUSG00000033213.17	novel	792	5	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	57.249939349798	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGATTTGTGCAAGA	NA	False	NA	19	True	AATAAA	-21	NA	122479754	122483001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122479862_122479991_122480054_122481135_122481197_122482620
ES.19953.2	chr2	+	672	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	4	116	4	-10	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTAAAACATGATTTGT	NA	False	NA	13	True	AATAAA	-15	NA	122479773	122482995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
ES.19953.3	chr2	+	2130	2	ISM	ENSMUSG00000033213.17	ENSMUST00000175727.2	523	3	-52	-131	13	-11	intron_retention	FALSE	canonical	3	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAAACATGATTTG	NA	False	NA	12	True	AATAAA	-14	NA	122479782	122482994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122480054_122481135
ES.19953.4	chr2	+	3161	1	FSM	ENSMUSG00000076309.4	ENSMUST00000102354.4	79	1	-2888	-194	-2888	194	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTAAAACATGATTTGT	NA	False	NA	13	True	AATAAA	-15	NA	122479834	122482995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122479800_122483000
ES.19953.5	chr2	+	3035	2	ISM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	65	112	0	-6	intron_retention	FALSE	canonical	3	142	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACATGATTTGTGCAA	NA	False	NA	17	True	AATAAA	-19	NA	122479834	122482999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122479862_122479991
ES.19954.1	chr2	-	5738	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	-286	6	-262	-6	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAATTGTTTTCTATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	122544845	122523158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ES.19954.3	chr2	-	5381	6	FSM	ENSMUSG00000005802.13	ENSMUST00000099457.4	3170	6	-61	-2150	-61	-15	multi-exon	FALSE	canonical	2	3	junction_5	4.53431361950185	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTCCCCTAATTGTT	NA	False	NA	NA	False	AATAAA	-38	NA	122544644	122523167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122543949
ES.19954.4	chr2	-	5456	7	NNC	ENSMUSG00000005802.13	novel	5458	7	NA	NA	-20	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.46572158042361	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTCCCCTAATTGTT	NA	False	NA	NA	False	AATAAA	-38	NA	122544603	122523167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_122527254_122527917_122528053_122528870_122528946_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ES.19954.5	chr2	-	3355	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	-110	2213	-86	-48	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGTGGCTGCCTGGGC	NA	False	NA	NA	False	AATAAA	-32	NA	122544669	122525365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ES.19955.1	chr2	+	6051	4	NIC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	-59	0	intron_retention	FALSE	canonical	3	133	junction_1	5.24933858267454	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCTGGCGATTCTTTT	8210	False	NA	4	True	AATAAA	-16	NA	122580363	122590019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122584651_122586045_122586134_122587974_122588062_122588430
ES.19955.10	chr2	+	3455	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	28	1	1	-1	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGTTTATCAGACACC	8297	False	NA	14	True	AATAAA	-17	NA	122580450	122591394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ES.19955.11	chr2	+	3898	4	NIC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	133	junction_2	4.92160768674447	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAAGGCTGGCGATTCTTT	8319	False	NA	3	True	AATAAA	-15	NA	122580472	122590018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122580625_122584508_122584651_122586045_122588062_122588430
ES.19955.12	chr2	+	2358	7	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	-5	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	69.7678690770727	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCATTGTTTATCAGA	8320	False	NA	10	True	AATAAA	-13	NA	122580473	122591390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122580625_122580903_122581079_122584508_122584651_122586045_122586134_122587974_122588062_122588430_122589336_122590580
ES.19955.13	chr2	+	3241	4	NIC	ENSMUSG00000005804.15	novel	2088	5	NA	NA	38	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	67.8871612800732	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCATTGTTTATCAGACA	8363	False	NA	12	True	AATAAA	-15	NA	122580516	122591392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122580625_122586049_122586134_122587974_122588062_122588430
ES.19955.14	chr2	+	582	4	ISM	ENSMUSG00000005804.15	ENSMUST00000129690.2	1108	5	4068	193	4068	-193	3prime_fragment	FALSE	canonical	3	133	junction_1	5.24933858267454	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTTTGGCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	122584546	122588733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_122584651_122586045_122586134_122587974_122588062_122588430
ES.19955.2	chr2	+	3556	5	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	60.051540363258	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCATTGTTTATCAGA	8270	False	NA	10	True	AATAAA	-13	NA	122580423	122591390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122580625_122584508_122584651_122586045_122586134_122587896_122588062_122588430
ES.19955.3	chr2	+	2101	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	9	1374	-1	2	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGCGATTCTTTTCA	8278	False	NA	6	True	AATAAA	-18	NA	122580431	122590021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ES.19955.4	chr2	+	2209	5	NIC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	60.4834688158674	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGCGATTCTTTTCA	8288	False	NA	6	True	AATAAA	-18	NA	122580441	122590021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122580625_122584508_122584651_122586045_122586134_122587856_122588062_122588430
ES.19955.5	chr2	+	5688	5	NIC	ENSMUSG00000005804.15	novel	2088	5	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	67.7403129605998	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAAGGCTGGCGATTCTTT	8289	False	NA	3	True	AATAAA	-15	NA	122580442	122590018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_122580625_122580903_122584651_122586049_122586134_122587974_122588062_122588430
ES.19955.6	chr2	+	2159	5	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	60.051540363258	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGAAGGCTGGCGATTCT	8293	False	NA	1	True	AATAAA	-13	NA	122580446	122590016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122580625_122584508_122584651_122586045_122586134_122587896_122588062_122588430
ES.19955.8	chr2	+	2014	4	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	67.6477806156434	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGAAGGCTGGCGATTCT	8296	False	NA	1	True	AATAAA	-13	NA	122580449	122590016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122580625_122586045_122586134_122587896_122588062_122588430
ES.19955.9	chr2	+	3408	6	NNC	ENSMUSG00000005804.15	novel	3484	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.625359744048	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGAAGGCTGGCGATTCT	8296	False	NA	1	True	AATAAA	-13	NA	122580449	122590016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_122580625_122580903_122582234_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ES.19956.1	chr2	-	171	1	Intergenic	novelGene_16547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	124908391	124908220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_124908200_124908400
ES.19957.1	chr2	+	1868	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	-204	290	-204	-290	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCTAACACTTAATTAC	NA	False	NA	4	True	AATAAA	-17	NA	124909839	124930307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ES.19957.10	chr2	+	5227	3	NIC	ENSMUSG00000035183.15	novel	604	4	NA	NA	-983	-2047	intron_retention	FALSE	canonical	3	27	junction_2	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAGAAGATAAGAATGT	NA	False	NA	NA	False	AATAAA	-25	NA	124921291	124928550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_124922818_124923146_124923248_124924950
ES.19957.11	chr2	+	6106	4	NNC	ENSMUSG00000035183.15	novel	604	4	NA	NA	-643	-744	intron_retention	FALSE	non_canonical	0	0	junction_3	12.9700509722291	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTAACAACATGCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	124921631	124929853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124922818_124923146_124923248_124924950_124926823_124926906
ES.19957.12	chr2	+	7634	1	Genic_Genomic	ENSMUSG00000035183.15	novel	NA	NA	NA	NA	718	29	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAACTCACA	NA	False	NA	NA	False	NA	NA	NA	124922992	124930626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_124923000_124930600
ES.19957.13	chr2	+	3163	1	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	2761	-2399	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTTTGTTTTTAGGT	NA	False	NA	NA	False	AATACA	-21	NA	124925035	124928198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_124925000_124928200
ES.19957.2	chr2	+	1866	6	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	-22	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.8	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGAATTTTCCACTGT	NA	False	NA	NA	False	AATAAA	-16	NA	124910021	124924864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124923667
ES.19957.3	chr2	+	2946	7	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	-9	2178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.077477638554	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACATAGAACTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	124910034	124927324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124926823_124926906
ES.19957.4	chr2	+	1965	6	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	2	1223	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.2878569196893	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGGAACAGAATGGG	NA	False	NA	NA	False	AATAAA	-14	NA	124910045	124926369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910222_124910691_124910773_124922540_124922625_124922713_124922818_124923146_124923248_124924950
ES.19957.5	chr2	+	3802	7	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	3	-2405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	10.077477638554	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATCAAAGTTTTGTTT	NA	False	NA	NA	False	AATACA	-15	NA	124910046	124928192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124926823_124926906
ES.19957.6	chr2	+	3052	8	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	19	2221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.8492038981536	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTGAGACTTCTCAGGG	NA	False	NA	NA	False	NA	NA	NA	124910062	124927367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910222_124910691_124910872_124921388_124921480_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124926823_124926906
ES.19957.7	chr2	+	1651	9	NNC	ENSMUSG00000035183.15	novel	604	4	NA	NA	284	-292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.0384331325831	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTAACACTTAATT	NA	False	NA	2	True	AATAAA	-15	NA	124910327	124930305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910495_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ES.19957.8	chr2	+	1918	9	NNC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	314	-283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3027013315533	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTAATTACTATTCTT	NA	False	NA	11	True	AATAAA	-24	NA	124910357	124930314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_124910872_124921388_124921480_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ES.19957.9	chr2	+	1224	7	NIC	ENSMUSG00000035183.15	novel	1954	9	NA	NA	-417	-290	combination_of_known_splicesites	FALSE	canonical	3	4	junction_5	26.4764045897475	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTCTAACACTTAATTAC	NA	False	NA	4	True	AATAAA	-17	NA	124910746	124930307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124929339_124929442_124929883
ES.19958.1	chr2	+	1945	1	Antisense	novelGene_ENSMUSG00000027201.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACACTGCCTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124940892	124942837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_124940900_124942800
ES.19959.1	chr2	+	2244	1	Intergenic	novelGene_16548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAAGCACTGCATTC	NA	False	NA	NA	False	NA	NA	NA	124962494	124964738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_124962500_124964700
ES.1996.1	chr1	+	167	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	178143256	178143423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178143300_178143400
ES.19960.1	chr2	-	7531	16	NNC	ENSMUSG00000027201.17	novel	2333	19	NA	NA	12	3653	intron_retention	FALSE	canonical	0	0	junction_13	253.631088175107	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGTCATATTGTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	124965531	124922894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124928637_124929596_124929624_124930782_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.10	chr2	-	1919	17	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-2	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	262.581170485909	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTAGCATACAGTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	124965497	124928523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124928637_124929596_124929624_124930782_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.11	chr2	-	1929	16	NNC	ENSMUSG00000027201.17	novel	2333	19	NA	NA	2	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.0534069893	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTAGCATACAGTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	124965493	124928523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124928637_124930762_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.12	chr2	-	1960	17	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-2	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	244.550320741969	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTAGCATACAGTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	124965517	124928523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124928637_124929596_124929624_124930782_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.13	chr2	-	4604	6	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	7087	145	intron_retention	FALSE	canonical	3	335	junction_3	141.821578047912	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTATGTTACCAAGGA	NA	False	NA	17	True	ATTAAA	-36	NA	124951706	124929515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875
ES.19960.14	chr2	-	3056	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-8	128	intron_retention	FALSE	canonical	0	0	junction_12	185.119500841583	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTTCTTTTTTCTTTA	NA	False	NA	0	True	ATTAAA	-19	NA	124965503	124929532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.15	chr2	-	5522	13	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-1	128	intron_retention	TRUE	non_canonical	0	0	junction_4	237.588229225832	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTTCTTTTTTCTTTA	NA	False	NA	0	True	ATTAAA	-19	NA	124965516	124929532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939711_124939773_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.16	chr2	-	3138	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	3	126	intron_retention	FALSE	canonical	0	0	junction_13	215.150634569261	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCACTTCTTTTTTCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	124965540	124929534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957348_124957411_124958584_124958794_124965304
ES.19960.18	chr2	-	3030	15	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	10	121	intron_retention	FALSE	canonical	0	0	junction_12	223.92901572068	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGAGTCACTTCTTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	124965505	124929539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.19	chr2	-	4702	13	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	1	7	intron_retention	FALSE	canonical	0	0	junction_10	200.467093448166	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTGCTTTTTATTCT	NA	False	NA	-1	True	NA	NA	NA	124965542	124929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.2	chr2	-	3559	16	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-8	3651	intron_retention	FALSE	canonical	0	0	junction_1	254.955124591673	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGTGTCATATTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	124965503	124922896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124923489_124929462_124929510_124929596_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.20	chr2	-	3059	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	215.150634569261	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTGCTTTTTATTC	NA	False	NA	-2	True	NA	NA	NA	124965577	124929654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.21	chr2	-	3020	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	185.119500841583	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACTTGTTGCTTTTTA	NA	False	NA	-5	True	NA	NA	NA	124965592	124929657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.22	chr2	-	3249	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-312	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACTTGTTGCTTTTTA	NA	False	NA	-5	True	NA	NA	NA	124965893	124929657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.25	chr2	-	7328	10	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	223.212792234863	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965542	124929660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.26	chr2	-	4596	12	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_9	246.605349388669	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965542	124929660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.28	chr2	-	4739	14	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_11	191.930614928274	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965518	124929660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957348_124957411_124958584_124958794_124965304
ES.19960.29	chr2	-	2752	13	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.588229225832	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965496	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.3	chr2	-	5164	2	NNC	ENSMUSG00000027201.17	novel	3424	2	NA	NA	2787	3649	intron_retention	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTCCAGTGTCATATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	124928144	124922898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124926829_124926910
ES.19960.31	chr2	-	2857	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	235.242314955371	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965496	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938050_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.34	chr2	-	2954	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	224.106297664883	703	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965542	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942329_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.35	chr2	-	4525	6	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-12128	0	intron_retention	FALSE	canonical	0	0	junction_3	272.927829288257	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124943059	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938148_124939482_124939555_124939896_124939996_124940369
ES.19960.36	chr2	-	3052	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	236.390204722803	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965497	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124940076_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.37	chr2	-	2741	12	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	244.471533268216	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965557	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.38	chr2	-	2577	13	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	259.492720942654	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965498	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.4	chr2	-	6898	5	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-9013	2261	intron_retention	FALSE	canonical	0	0	junction_1	281.479461950601	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGCATACAGCACCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	124939944	124924286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124926829_124926910_124930958_124937627_124937680_124937831_124938041_124939896
ES.19960.40	chr2	-	6927	11	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_8	202.344285810101	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965549	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957348_124957411_124958584_124958794_124965304
ES.19960.41	chr2	-	2806	14	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	253.16958789848	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965502	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.42	chr2	-	6464	8	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	4481	0	intron_retention	FALSE	canonical	3	335	junction_3	119.925827416919	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124954312	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589
ES.19960.43	chr2	-	4145	7	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	7239	0	intron_retention	FALSE	canonical	2	7	junction_4	245.128990986832	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124951554	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124940369_124942341_124950875_124950940_124951073
ES.19960.45	chr2	-	2960	15	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	223.92901572068	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965557	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.46	chr2	-	2354	5	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-9410	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	277.451234453913	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124940341	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939711_124939772
ES.19960.47	chr2	-	2790	13	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	236.12371698375	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965537	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.48	chr2	-	6334	6	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-13698	0	intron_retention	FALSE	non_canonical	0	0	junction_3	282.003262392477	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124944629	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124939711_124939773_124940439_124940716_124940768_124942238
ES.19960.49	chr2	-	2876	14	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	242.298803255756	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965542	124929661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.5	chr2	-	4787	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-2	344	intron_retention	FALSE	canonical	0	0	junction_13	215.150634569261	705	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTCCAATTTGTTTTT	NA	False	NA	NA	False	AATATA	-24	NA	124965497	124927846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.50	chr2	-	5315	12	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-3	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	246.704862652114	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965498	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939693_124939754_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124958578_124958794_124965304
ES.19960.51	chr2	-	2658	13	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	246.69868879983	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965499	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.54	chr2	-	6637	11	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_9	201.415019300945	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965524	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124958794_124965304
ES.19960.56	chr2	-	5404	13	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	81	junction_11	178.296316251595	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965497	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124958794_124965304
ES.19960.58	chr2	-	2839	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965497	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957353_124957411_124958584_124958794_124965304
ES.19960.6	chr2	-	4715	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-11	339	intron_retention	FALSE	canonical	0	0	junction_11	192.845739620923	705	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATACTTCCAATTTG	NA	False	NA	NA	False	AATATA	-19	NA	124965557	124927851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957348_124957411_124958584_124958794_124965304
ES.19960.60	chr2	-	4442	15	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_12	208.390148715415	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965497	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.62	chr2	-	4587	12	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	254.886168078391	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124965493	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124958578_124958794_124965301
ES.19960.63	chr2	-	3432	6	NNC	ENSMUSG00000027201.17	novel	1631	15	NA	NA	-11134	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	272.927829288257	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124942065	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938050_124939482_124939555_124939896_124939996_124940369
ES.19960.64	chr2	-	5649	4	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-11265	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	319.716541121454	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124942196	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124939711_124939773
ES.19960.65	chr2	-	5059	6	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	6485	-1	intron_retention	FALSE	canonical	3	335	junction_3	141.821578047912	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGCTTACTTGTTGCT	NA	False	NA	-10	True	NA	NA	NA	124952308	124929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875
ES.19960.66	chr2	-	2845	13	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	196.545513530299	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGCTTACTTGTTGC	NA	False	NA	-11	True	NA	NA	NA	124965555	124929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124958578_124958794_124965304
ES.19960.67	chr2	-	2973	15	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	221.42959677182	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGCTTACTTGTTGC	NA	False	NA	-11	True	NA	NA	NA	124965560	124929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124958578_124958794_124965304
ES.19960.68	chr2	-	7341	13	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-17	-2	intron_retention	FALSE	canonical	2	81	junction_11	177.518230675675	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGCTTACTTGTTGC	NA	False	NA	-11	True	NA	NA	NA	124965563	124929663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124958794_124965304
ES.19960.7	chr2	-	5053	5	ISM	ENSMUSG00000027201.17	ENSMUST00000142718.8	2942	16	23587	-1809	-11025	339	intron_retention	FALSE	canonical	3	335	junction_3	154.948983539744	702	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATACTTCCAATTTG	NA	False	NA	NA	False	AATATA	-19	NA	124941956	124927851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369
ES.19960.70	chr2	-	5365	13	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-1	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	237.588229225832	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTATACAGCTTACT	NA	False	NA	-17	True	NA	NA	NA	124965496	124929669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939711_124939773_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.71	chr2	-	2858	14	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	227.17727613672	703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAGGTATACAGCTTAC	NA	False	NA	-18	True	NA	NA	NA	124965542	124929670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.72	chr2	-	2473	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	12	-362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGAGTCCCTTGCTAT	NA	False	NA	NA	False	AATAAA	-27	NA	124965483	124930023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.73	chr2	-	2377	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-11	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATTCTATTATTTCC	NA	False	NA	2	True	ATTAAA	-19	NA	124965557	124930193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.74	chr2	-	2386	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-1	-534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	185.119500841583	699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTTATTCTATTATTT	NA	False	NA	0	True	ATTAAA	-17	NA	124965496	124930195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.75	chr2	-	2455	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	-1	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	215.150634569261	699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCCCTTATTCTATTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	124965516	124930197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.76	chr2	-	4074	13	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	37	-536	intron_retention	FALSE	canonical	0	0	junction_10	200.467093448166	699	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCCCTTATTCTATTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	124965458	124930197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.79	chr2	-	1993	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-11	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGCACATCTGATCA	NA	False	NA	NA	False	NA	NA	NA	124965557	124930577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.8	chr2	-	4048	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-2	-26	intron_retention	FALSE	canonical	0	0	junction_11	192.845739620923	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGTTACAATAAAGTTA	NA	False	NA	NA	False	AATAAA	-29	NA	124965548	124928513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.80	chr2	-	2050	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	1	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	185.119500841583	695	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGCACATCTGATCA	NA	False	NA	NA	False	NA	NA	NA	124965542	124930577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.81	chr2	-	2001	16	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	4	104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	246.106065661851	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124965511	124930649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939893_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.82	chr2	-	1906	15	NNC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	-2	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	223.92901572068	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTACTGTGAGTTTTT	NA	False	NA	NA	False	AATGAA	-40	NA	124965497	124930655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.83	chr2	-	1784	14	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	2	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	192.845739620923	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCTTACAAATGCTGTA	NA	False	NA	NA	False	AGTAAA	-20	NA	124965493	124930722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.84	chr2	-	1868	15	NNC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	4	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	185.119500841583	694	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGTATGCTTACAAAT	NA	False	NA	NA	False	AGTAAA	-14	NA	124965511	124930728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.85	chr2	-	1600	12	NNC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-9	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	198.460188151155	684	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTGTCTGTCTCTTTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	124965555	124937790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19960.86	chr2	-	4391	8	NIC	ENSMUSG00000027201.17	novel	1801	10	NA	NA	-1	8	intron_retention	FALSE	canonical	2	81	junction_6	196.016554902688	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGAGTGATTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	124965516	124941546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124958794_124965304
ES.19960.9	chr2	-	1761	15	NNC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	0	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	279.717505088726	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTAGCATACAGTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	124965543	124928523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_124928637_124929596_124929624_124930782_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124952399_124952592_124955768_124955863_124957344_124957411_124958584_124958794_124965304
ES.19961.1	chr2	-	177	1	Intergenic	novelGene_16549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	3706	False	NA	NA	False	NA	NA	NA	125084968	125084791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_125084800_125085000
ES.19962.1	chr2	+	972	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	45	3	45	-3	multi-exon	TRUE	canonical	3	52	junction_1	864.28364685572	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGACTGGAGAACATGG	NA	False	NA	29	True	AATAAA	-30	NA	125089154	125099665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.10	chr2	+	1609	6	NNC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-183	-110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	946.464579368927	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCCCATTTGGAGGCT	NA	False	NA	7	True	AATAAA	-17	NA	125089636	125100418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125089817_125091085_125091178_125092888_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.11	chr2	+	1998	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	-283	-183	283	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTACATTTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	125089636	125100811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.12	chr2	+	8182	6	NNC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-183	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1184.10269824876	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089636	125099652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125089817_125091085_125092611_125092759_125094425_125094478_125098844_125098989_125099061_125099276
ES.19962.13	chr2	+	2729	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	245	-1024	-173	1024	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGACAGATATAA	NA	False	NA	NA	False	AATATA	-10	NA	125089646	125101552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.14	chr2	+	2128	1	NIC	ENSMUSG00000027203.16	novel	1020	7	NA	NA	-172	827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAGGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	125089647	125091775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125089600_125091800
ES.19962.15	chr2	+	6912	5	NNC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-154	-22	intron_retention	FALSE	canonical	2	2	junction_2	1206.79938266474	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGATATGATTTTACATA	NA	False	NA	10	True	AATAAA	-11	NA	125089665	125099646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125089817_125090879_125090941_125091085_125091178_125092892_125098844_125098989
ES.19962.16	chr2	+	6192	3	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	3987	18	3277	-18	3prime_fragment	FALSE	canonical	3	2404	junction_2	25	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGATTTTACATAAACT	NA	False	NA	14	True	AATAAA	-15	NA	125093096	125099650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125098844_125098989_125099061_125099276
ES.19962.17	chr2	+	4745	2	NIC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	4871	-17	intron_retention	FALSE	canonical	3	2404	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATTTTACATAAACTG	NA	False	NA	15	True	AATAAA	-16	NA	125094690	125099651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125099061_125099276
ES.19962.2	chr2	+	3593	1	NIC	ENSMUSG00000027203.16	novel	1020	7	NA	NA	60	1814	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCTGTTGAAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	125089169	125092762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125089200_125092800
ES.19962.3	chr2	+	946	7	NNC	ENSMUSG00000027203.16	novel	1020	7	NA	NA	69	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	883.552425659558	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATGATTTTACATAAAC	NA	False	NA	13	True	AATAAA	-14	NA	125089178	125099649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125089322_125089669_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.4	chr2	+	1033	5	NIC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-5	-17	combination_of_known_splicesites	FALSE	canonical	3	111	junction_2	998.653687471288	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATTTTACATAAACTG	NA	False	NA	15	True	AATAAA	-16	NA	125089396	125099651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125089817_125091085_125091178_125098768_125098844_125098989_125099061_125099276
ES.19962.5	chr2	+	1102	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	-2	850	-2	10	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGGCTGAGTCAAG	NA	False	NA	42	True	AATAAA	-43	NA	125089399	125099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.6	chr2	+	1773	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	177	0	177	0	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATATGTTTTAAGG	NA	False	NA	117	True	ATTAAA	-18	NA	125089578	125100528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.7	chr2	+	1913	2	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	470	6907	178	1813	internal_fragment	FALSE	canonical	3	2392	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATCTGTTGAAATTAAG	NA	False	NA	NA	False	NA	NA	NA	125089579	125092761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125089817_125091085
ES.19962.8	chr2	+	2212	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	188	-450	188	450	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCATCTTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	125089589	125100978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ES.19962.9	chr2	+	6639	6	NNC	ENSMUSG00000027203.16	novel	1950	6	NA	NA	-206	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	963.141028095055	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATTTTACATAAACTGA	NA	False	NA	16	True	AATAAA	-17	NA	125089613	125099652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125089817_125091085_125091178_125092892_125094425_125094478_125098844_125098989_125099061_125099276
ES.19963.1	chr2	-	3308	1	Antisense	novelGene_ENSMUSG00000027203.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGGGGGGGGGGGTTGGG	610	False	NA	NA	False	NA	NA	NA	125100280	125096972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_125097000_125100300
ES.19964.1	chr2	-	9908	66	FSM	ENSMUSG00000027204.14	ENSMUST00000028633.13	9847	66	-61	0	-61	0	multi-exon	TRUE	canonical	0	0	junction_5	1.38033526499434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCTTTGTTATCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	125348366	125142513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125143896_125145005_125145181_125148189_125148422_125150389_125150510_125151300_125151430_125151676_125151794_125154419_125154543_125154758_125154885_125156513_125156721_125157278_125157405_125158886_125159019_125159331_125159455_125160916_125161037_125162782_125162900_125163115_125163182_125163535_125163686_125166745_125166872_125170012_125170133_125170910_125171040_125172452_125172570_125174177_125174304_125177284_125177408_125180352_125180479_125183175_125183248_125183922_125184082_125184719_125184843_125185724_125185851_125185944_125186014_125187774_125187940_125188249_125188373_125190026_125190150_125192165_125192292_125193601_125193725_125193872_125193996_125200725_125200852_125202027_125202154_125203103_125203227_125204381_125204508_125204594_125204721_125205531_125205661_125205781_125205908_125207403_125207632_125209502_125209629_125211253_125211305_125211713_125211852_125212065_125212186_125212695_125212822_125214310_125214437_125215830_125215885_125219706_125219860_125220926_125221050_125223904_125224028_125225530_125225657_125229185_125229306_125231090_125231232_125231799_125231986_125236531_125236691_125239697_125239824_125245023_125245150_125254525_125254724_125308522_125308619_125310462_125310559_125319416_125319516_125321109_125321193_125347359_125347710_125348258
ES.19964.2	chr2	-	4353	27	ISM	ENSMUSG00000027204.14	ENSMUST00000028633.13	9847	66	162545	349	162232	-316	3prime_fragment	FALSE	canonical	0	0	junction_5	1.3284550799362	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTTTGTAATGGTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	125185760	125142862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125143896_125145005_125145181_125148189_125148422_125150389_125150510_125151300_125151430_125151676_125151794_125154419_125154543_125154758_125154885_125156513_125156721_125157278_125157405_125158886_125159019_125159331_125159455_125160916_125161037_125162782_125162900_125163115_125163182_125163535_125163686_125166745_125166872_125170012_125170133_125170910_125171040_125172452_125172570_125174177_125174304_125177284_125177408_125180352_125180479_125183175_125183248_125183922_125184082_125184719_125184843_125185724
ES.19964.3	chr2	-	1280	2	ISM	ENSMUSG00000027204.14	ENSMUST00000028633.13	9847	66	-51	204014	-51	-114852	5prime_fragment	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGCCTGCTCAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	125348356	125346527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125347710_125348258
ES.19965.1	chr2	+	5357	5	Antisense	novelGene_ENSMUSG00000068394.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125439126	125455666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125443232_125444760_125444853_125447254_125447403_125452926_125453129_125454856
ES.19965.2	chr2	+	9322	3	Antisense	novelGene_ENSMUSG00000068394.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATTGCTTCACTATCA	NA	False	NA	NA	False	NA	NA	NA	125439126	125455700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125447403_125452926_125453129_125454856
ES.19966.1	chr2	+	4617	2	Antisense	novelGene_ENSMUSG00000068394.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125459012	125463735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125461811_125461916
ES.19967.1	chr2	-	7995	29	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	13	16440	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	14.2751746835161	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTTTTGTTCCTTTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	125467020	125388567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125391991_125397579_125397745_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.14	chr2	-	5538	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	13.7091512648437	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467009	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.15	chr2	-	5790	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	12.3508384280802	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467029	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462345_125463092_125463187_125466795
ES.19967.17	chr2	-	5720	5	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	51518	-2	intron_retention	FALSE	canonical	3	12	junction_1	16.1458198924675	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125415515	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474
ES.19967.18	chr2	-	9847	25	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	13.102096418343	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467037	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425752_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.19	chr2	-	8254	26	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_10	11.6824654932082	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467026	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428542_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125462311_125463092_125463187_125466795
ES.19967.2	chr2	-	9975	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-4	16439	intron_retention	FALSE	canonical	1	1	junction_1	14.4709159145994	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTTTTGTTCCTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	125467037	125388568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125391991_125397579_125397745_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.20	chr2	-	5734	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.7078546244624	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467030	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410834_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436769_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.21	chr2	-	5738	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	10.2094660075404	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467043	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.23	chr2	-	6335	8	NIC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	41837	-2	intron_retention	FALSE	canonical	3	25	junction_1	8.48287590817344	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125425196	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125413754_125418633_125418776_125421293_125421945_125423615
ES.19967.24	chr2	-	5824	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	12.7898493702459	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGTCATGACTTATT	NA	False	NA	-2	True	AATAAA	-16	NA	125467083	125405009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125462036_125462206_125462311_125463092_125463187_125466795
ES.19967.26	chr2	-	4212	17	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.8551378105741	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTGTCATGACTTAT	NA	False	NA	-3	True	AATAAA	-15	NA	125467037	125405010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125466795
ES.19967.28	chr2	-	4661	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-5	-1439	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.6886347856144	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTTTATTTTTACAC	NA	False	NA	NA	False	AATAAA	-19	NA	125467038	125406446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406648_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.29	chr2	-	4473	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	9	-1448	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	13.2761408986107	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGTTATTTACTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	125467024	125406455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406648_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.3	chr2	-	5843	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	31	112	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9.53097613955882	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTTTGACCAGCCA	NA	False	NA	NA	False	NA	NA	NA	125467002	125404895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.30	chr2	-	5402	21	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	45	-14516	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_20	8.03741251896405	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCTAAGATGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	125466988	125419523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.32	chr2	-	5399	21	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	13	-14516	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	10.7684725007774	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCTAAGATGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	125467020	125419523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.33	chr2	-	6170	2	ISM	ENSMUSG00000068394.5	ENSMUST00000089776.3	5768	28	39645	14540	39645	-14540	intron_retention	FALSE	canonical	3	36	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-39	NA	125427388	125419547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125421945_125423615
ES.19967.34	chr2	-	4200	19	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-24	-19387	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_13	10.9585357677401	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	125467057	125424394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.35	chr2	-	4148	19	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	28	-19403	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	12.2712400894666	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGGGGGGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	125467005	125424410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460443_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.36	chr2	-	3103	18	NIC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	9	-20345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	13.110391029301	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTGAAATCTATGC	NA	False	NA	NA	False	ATTAAA	-13	NA	125467024	125425352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.37	chr2	-	3242	19	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	9	-20347	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_18	7.77083023036379	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTGTTGAAATCTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	125467024	125425354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.38	chr2	-	4918	12	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	9	-34922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.403333963866	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAATATACCTAA	NA	False	NA	NA	False	NA	NA	NA	125467024	125439929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462345_125463092_125463187_125466795
ES.19967.4	chr2	-	5809	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	9.53097613955882	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467080	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.5	chr2	-	5970	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	12	0	intron_retention	FALSE	canonical	3	25	junction_1	8.17088205822771	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467021	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125462311_125463092_125463187_125466795
ES.19967.6	chr2	-	5530	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	11.4496582724644	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467002	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.7	chr2	-	5571	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.7150448310122	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467009	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406315_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125418633_125418774_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456349_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19967.9	chr2	-	7857	27	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	7	0	intron_retention	FALSE	canonical	3	10	junction_21	10.260007382029	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467026	125405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125406318_125408128_125408242_125408452_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ES.19968.1	chr2	+	1737	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	-47	1	-47	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTTTGTCTAATAGC	NA	False	NA	17	True	AATAAA	-17	NA	125514967	125516704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125515000_125516700
ES.19968.2	chr2	+	1501	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	-6	196	-6	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATGTATGAGCTATT	NA	False	NA	NA	False	AGTAAA	-23	NA	125515008	125516509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125515000_125516500
ES.19969.1	chr2	-	4135	13	NNC	ENSMUSG00000035109.15	novel	4059	12	NA	NA	15642	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.862006702732383	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGACAGCTGACAATGTG	NA	False	NA	NA	False	AATAAA	-12	NA	125549665	125469369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125471691_125481183_125481438_125491065_125491240_125494394_125494456_125497471_125497641_125499408_125499530_125508192_125508245_125512186_125512241_125515025_125515618_125520607_125520728_125522006_125522071_125536745_125536817_125549583
ES.1997.1	chr1	+	3767	2	NIC	ENSMUSG00000026500.7	novel	471	4	NA	NA	-824	0	intron_retention	FALSE	canonical	3	13	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	False	NA	20	True	ATTAAA	-23	NA	178145870	178150258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178149425_178150045
ES.1997.2	chr1	+	3289	3	NIC	ENSMUSG00000026500.7	novel	471	4	NA	NA	-288	-6	intron_retention	FALSE	canonical	3	422	junction_2	50.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTATTGTTTTACATG	NA	False	NA	14	True	ATTAAA	-17	NA	178146406	178150252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178149425_178149506_178149571_178150045
ES.1997.3	chr1	+	3845	1	Genic_Genomic	ENSMUSG00000026500.7	novel	NA	NA	NA	NA	-287	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTATTGTTTTACATG	NA	False	NA	14	True	ATTAAA	-17	NA	178146407	178150252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_178146400_178150300
ES.1997.4	chr1	+	825	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	-266	-88	-266	88	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGTGTCAGCTTAATTA	NA	False	NA	108	True	AAAACA	-18	NA	178146428	178150346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ES.1997.5	chr1	+	3475	2	NIC	ENSMUSG00000026500.7	novel	471	4	NA	NA	4	-3	intron_retention	FALSE	canonical	3	523	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATTGTTTTACATGAAA	NA	False	NA	17	True	ATTAAA	-20	NA	178146698	178150255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178149425_178149506
ES.19970.1	chr2	+	4504	8	Antisense	novelGene_ENSMUSG00000035093.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125586235	125609907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125587865_125589298_125589528_125592199_125592364_125593650_125594901_125599113_125599520_125600085_125600166_125602190_125602322_125609292
ES.19970.2	chr2	+	4117	10	Antisense	novelGene_ENSMUSG00000035093.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTTCCACTTCAGC	NA	False	NA	NA	False	NA	NA	NA	125586237	125609933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125587869_125589301_125589528_125592199_125592364_125593648_125594901_125599113_125599255_125599350_125599520_125600085_125600166_125602190_125602322_125609292_125609413_125609730
ES.19970.3	chr2	+	3161	11	Antisense	novelGene_ENSMUSG00000035093.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGCTTCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	125586237	125609932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125587864_125589297_125589528_125592199_125592364_125593650_125593780_125594731_125594901_125599113_125599255_125599350_125599520_125600085_125600166_125602190_125602322_125609292_125609413_125609730
ES.19970.4	chr2	+	6710	8	Antisense	novelGene_ENSMUSG00000035093.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTCCACTTCAGCAA	NA	False	NA	NA	False	NA	NA	NA	125586237	125609935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125587869_125589301_125589528_125592200_125592364_125593650_125594901_125599113_125599255_125599350_125602324_125609291_125609413_125609730
ES.19970.5	chr2	+	5497	9	Antisense	novelGene_ENSMUSG00000035093.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTCCACTTCAGCAA	NA	False	NA	NA	False	NA	NA	NA	125586289	125609935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_125589528_125592200_125592364_125593650_125594901_125599113_125599255_125599350_125599520_125600085_125600166_125602190_125602322_125609292_125609413_125609730
ES.19970.6	chr2	+	2087	1	Intergenic	novelGene_16550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAAATGGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	125604476	125606563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_125604500_125606600
ES.19971.1	chr2	-	6742	17	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	49	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.3130498462796	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTGTGTTCTTTTTCT	353	False	NA	NA	False	AATAAA	-34	NA	125624741	125578907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609414_125610008_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.10	chr2	-	6680	17	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	86	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.3130498462796	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACCAAGAGAGAATTTC	390	False	NA	NA	False	AATAAA	-20	NA	125624704	125578921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609421_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.12	chr2	-	6465	18	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	128	-28	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	20.0447596030297	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAATGGATTATACCA	432	False	NA	NA	False	AATAAA	-8	NA	125624662	125578933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582838_125585733_125585778_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.13	chr2	-	6151	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	103	543	103	-543	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTTGTGTGATTTT	407	False	NA	NA	False	TTTAAA	-23	NA	125624687	125579448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.14	chr2	-	6041	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	71	685	71	-685	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTTATACATTGAAGT	375	False	NA	NA	False	AATATA	-30	NA	125624719	125579590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.15	chr2	-	3572	17	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	102	-2944	combination_of_known_splicesites	FALSE	canonical	3	5	junction_16	17.9041501822901	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTTGCTTGCATGC	406	False	NA	NA	False	ATTAAA	-17	NA	125624688	125581849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125624518
ES.19971.16	chr2	-	3765	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	86	2946	86	-2946	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCAGTGTTTGCTTGCAT	390	False	NA	NA	False	ATTAAA	-15	NA	125624704	125581851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.17	chr2	-	4166	3	ISM	ENSMUSG00000035093.17	ENSMUST00000139944.2	2295	9	8654	-1386	604	1386	3prime_fragment	FALSE	canonical	3	62	junction_2	10.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCAGCCAGTGGTG	NA	False	NA	NA	False	AAAAAG	-10	NA	125593580	125585308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125587872_125589304_125589526_125592198
ES.19971.18	chr2	-	2631	17	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	120	1023	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	20.6185596005153	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTTTTTAACTTTT	424	False	NA	NA	False	ATTAAA	-16	NA	125624670	125585671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125585778_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.19	chr2	-	3599	16	ISM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	69	7788	69	1	5prime_fragment	FALSE	canonical	3	54	junction_4	12.1812241676369	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCTAGAGGATTTTTA	373	False	NA	NA	False	ATTAAA	-17	NA	125624721	125586693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.2	chr2	-	6767	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	27	3	27	-3	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTCTGTGTTCTTTTTC	331	False	NA	NA	False	AATAAA	-33	NA	125624763	125578908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.20	chr2	-	1767	8	ISM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	86	22848	86	-9456	5prime_fragment	FALSE	canonical	3	65	junction_5	13.4558992449333	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAAATAAAATAAGATAGG	390	False	NA	NA	False	NA	NA	NA	125624704	125601753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.21	chr2	-	901	3	ISM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	28	36037	28	-22645	5prime_fragment	FALSE	canonical	3	72	junction_1	18	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTTTTTCTTGTGA	332	False	NA	NA	False	AATAAA	-23	NA	125624762	125614942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125615421_125617472_125617652_125624518
ES.19971.22	chr2	-	159	1	Intergenic	novelGene_16551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	6847	False	NA	NA	False	NA	NA	NA	125618247	125618088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_125618100_125618200
ES.19971.3	chr2	-	6959	17	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	106	-5	intron_retention	FALSE	canonical	3	54	junction_6	11.9842018403396	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATTTCTGTGTTCTTTT	410	False	NA	NA	False	AATAAA	-31	NA	125624684	125578910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.4	chr2	-	5001	9	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	3037	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5437737031943	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATTTCTGTGTTCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	125599197	125578911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582670_125582737_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113
ES.19971.5	chr2	-	5812	1	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	9460	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAATTTCTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-29	NA	125584724	125578912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125578900_125584700
ES.19971.7	chr2	-	6564	17	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	45	-9	combination_of_known_splicesites	FALSE	canonical	3	5	junction_16	17.9041501822901	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGAATTTCTGTGTTC	349	False	NA	NA	False	AATAAA	-27	NA	125624745	125578914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125624518
ES.19971.8	chr2	-	6740	19	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	86	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	24.8758026112838	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGAGAATTTCTGTGTT	390	False	NA	NA	False	AATAAA	-26	NA	125624704	125578915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594000_125594040_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ES.19971.9	chr2	-	3675	3	NNC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	104	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGAGAGAATTTCTGTG	408	False	NA	NA	False	AATAAA	-24	NA	125624686	125578917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125582254_125617480_125617652_125624518
ES.19972.1	chr2	+	198	1	Intergenic	novelGene_16552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAAGCCTTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	125641118	125641316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_125641100_125641300
ES.19973.1	chr2	-	4316	12	ISM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	9285	-2446	9142	1148	3prime_fragment	FALSE	canonical	3	620	junction_9	118.965860788118	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTCTTGTCCGATTTT	NA	False	NA	NA	False	NA	NA	NA	125691774	125671075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659
ES.19973.10	chr2	-	6013	13	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	309.589916933137	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125700915	125672222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125680347_125680491_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.11	chr2	-	3153	12	NIC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	290.444430041529	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGTGTGCATGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	125700923	125672222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.13	chr2	-	3228	13	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	276.901143109875	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	-4	True	AATAAA	-22	NA	125700922	125672223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700861
ES.19973.16	chr2	-	3208	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	58	-1193	-18	-105	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCACGTTTTTTACAG	NA	False	NA	-109	True	CATAAA	-15	NA	125701001	125672328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.17	chr2	-	3226	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	60	106	-16	-106	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTCACGTTTTTTACA	NA	False	NA	-110	True	TATAAA	-45	NA	125700999	125672329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.2	chr2	-	4274	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	138	-2339	-5	1041	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTGAAAGAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	125700921	125671182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.20	chr2	-	3168	13	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-13	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	309.55114233713	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700996	125672372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684427_125684549_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.21	chr2	-	2865	10	NIC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-5	-149	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	339.588131072675	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700921	125672372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.22	chr2	-	3126	13	NIC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	1	-149	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	271.14151696526	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700915	125672372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684680_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.23	chr2	-	3209	12	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-2	-149	intron_retention	FALSE	canonical	1	3	junction_4	435.249638637282	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700918	125672372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125678061_125678160_125679146_125679233_125681068_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.24	chr2	-	3003	12	NIC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-7	-149	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	290.444430041529	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTATTTTCTTCTAT	NA	False	NA	77	True	AATAAA	-21	NA	125700923	125672372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.25	chr2	-	2323	7	NNC	ENSMUSG00000027206.14	novel	1853	13	NA	NA	1	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	476.599645637953	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTATTTTCTT	NA	False	NA	73	True	AATAAA	-17	NA	125700915	125672376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125682387_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.27	chr2	-	5380	14	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-5	-153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	348.734092763557	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTATTTTCTT	NA	False	NA	73	True	AATAAA	-17	NA	125700921	125672376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125680350_125680496_125680595_125681056_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.28	chr2	-	2880	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	1	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTATTTTCTT	NA	False	NA	73	True	AATAAA	-17	NA	125700915	125672376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.3	chr2	-	4289	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	143	-1040	0	1040	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAACCTGAAAGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	125700916	125671183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.30	chr2	-	3044	12	NIC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	6	-155	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	280.647745447551	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTATGTGTATTTTC	NA	False	NA	71	True	AATAAA	-15	NA	125700977	125672378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.31	chr2	-	3178	14	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	2	-155	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	364.774032346816	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTATGTGTATTTTC	NA	False	NA	71	True	AATAAA	-15	NA	125700914	125672378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125679146_125679233_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.32	chr2	-	5841	13	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-6	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	278.340019879763	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTATGTGTATTTTC	NA	False	NA	71	True	AATAAA	-15	NA	125700922	125672378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125680350_125680496_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.33	chr2	-	3124	13	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-6	-156	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	300.463103207181	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGTATGTGTATTTT	NA	False	NA	70	True	AATAAA	-14	NA	125700922	125672379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674283_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.34	chr2	-	1747	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTTCTTGATGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	125700925	125673519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.35	chr2	-	2018	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	57	-2	-19	-1	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTTCTTGATGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	125701002	125673519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.36	chr2	-	2013	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	82	1297	6	1	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGGTTCTTGATGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	125700977	125673520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.37	chr2	-	1975	13	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.463103207181	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125700915	125673521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674283_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.38	chr2	-	1839	12	NIC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	280.647745447551	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125700915	125673521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.4	chr2	-	4056	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	1	1023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTTTTTCAAAGTT	NA	False	NA	NA	False	NA	NA	NA	125700915	125671200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.41	chr2	-	1760	12	NIC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	-6	-114	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	323.8013624339	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCGTCTATTTCTGTT	NA	False	NA	-8	True	TATAAA	-45	NA	125700922	125673635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.42	chr2	-	4115	14	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	0	-115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	348.734092763557	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCGTCTATTTCTGT	NA	False	NA	-9	True	TATAAA	-44	NA	125700916	125673636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125680350_125680496_125680595_125681056_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.43	chr2	-	1894	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	60	119	-16	-119	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTGTCCGTCTATTT	NA	False	NA	-13	True	TATAAA	-40	NA	125700999	125673640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.44	chr2	-	1869	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	106	1417	6	-119	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTGTCCGTCTATTT	NA	False	NA	-13	True	TATAAA	-40	NA	125700953	125673640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.45	chr2	-	1059	7	NNC	ENSMUSG00000027206.14	novel	1853	13	NA	NA	-2	-122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	476.599645637953	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAACTGTGTCCGTCTA	NA	False	NA	-16	True	TATAAA	-37	NA	125700918	125673643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125682387_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.5	chr2	-	3728	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	144	-1799	1	501	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAATCTAACGTAACT	NA	False	NA	NA	False	TATAAA	-19	NA	125700915	125671722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.6	chr2	-	3277	13	NIC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	1	2	combination_of_known_junctions	TRUE	canonical	1	2	junction_9	271.14151696526	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125700915	125672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684680_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.7	chr2	-	3119	11	NNC	ENSMUSG00000027206.14	novel	2073	13	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	296.558324786205	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125700999	125672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125691649_125691774_125700855
ES.19973.8	chr2	-	3315	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	58	-1300	-18	2	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125701001	125672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19973.9	chr2	-	3336	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	58	-2	-18	2	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGTGCATGTGATA	NA	False	NA	-2	True	AATAAA	-24	NA	125701001	125672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ES.19974.1	chr2	+	1614	8	NIC	ENSMUSG00000027207.16	novel	2605	10	NA	NA	50	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.367965843994	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTGCTCTTGAA	NA	False	NA	6	True	ATTAAA	-13	NA	125701117	125825505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125701298_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ES.19974.2	chr2	+	1819	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	72	714	58	-2	multi-exon	FALSE	canonical	3	11	junction_1	32.0916896284673	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTGCTCTTGAA	NA	False	NA	6	True	ATTAAA	-13	NA	125701125	125825505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ES.19974.3	chr2	+	2143	9	NNC	ENSMUSG00000027207.16	novel	1928	10	NA	NA	-61	14972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.8895264056611	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACATCTCTTTATCAAAT	NA	False	NA	NA	False	TATAAA	-15	NA	125708101	125804242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125803217
ES.19974.4	chr2	+	1808	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	118	2	-18	-2	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTGCTCTTGAA	NA	False	NA	6	True	ATTAAA	-13	NA	125708144	125825505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ES.19974.5	chr2	+	1773	10	NIC	ENSMUSG00000027207.16	novel	1928	10	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	34.6135633160196	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGTGTGTTGCTCTTG	NA	False	NA	4	True	ATTAAA	-11	NA	125708160	125825503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125708289_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ES.19974.6	chr2	+	1636	10	NNC	ENSMUSG00000027207.16	novel	1928	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	35.4582000476234	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTGCTCTTGAA	NA	False	NA	6	True	ATTAAA	-13	NA	125708188	125825505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817254_125824974
ES.19974.7	chr2	+	1830	12	NNC	ENSMUSG00000027207.16	novel	2605	10	NA	NA	12049	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.3788364277838	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTGCTCTTGAA	NA	False	NA	6	True	ATTAAA	-13	NA	125720236	125825505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125751048_125751130_125762709_125762870_125771480_125771580_125772295_125772405_125773172_125773326_125788703_125788915_125817179_125817254_125824974
ES.19975.1	chr2	-	204	1	Intergenic	novelGene_16553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAGTCCAGATCCATA	8607	False	NA	NA	False	ATTAAA	-22	NA	125715413	125715209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_125715200_125715400
ES.19976.1	chr2	-	2201	1	Antisense	novelGene_ENSMUSG00000027207.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAAAGTATGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	125738622	125736421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_125736400_125738600
ES.19977.1	chr2	-	2609	2	Antisense	novelGene_ENSMUSG00000027207.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	125803338	125799142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_125801565_125803151
ES.19978.1	chr2	+	1386	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	-42	-2	-42	-1	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCCTTACCTTTCGAC	7237	False	NA	27	True	ATTAAA	-25	NA	125994018	126007198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.10	chr2	+	3785	4	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	44	2211	44	-2211	5prime_fragment	FALSE	canonical	3	175	junction_1	16.739839372653	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCACCTTGTGGTGATC	7323	False	NA	NA	False	NA	NA	NA	125994104	126004985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689
ES.19978.11	chr2	+	8392	2	NIC	ENSMUSG00000023330.13	novel	1276	4	NA	NA	45	-1	intron_retention	FALSE	canonical	3	183	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTCGCCCTTACCTTTC	7324	False	NA	24	True	ATTAAA	-22	NA	125994105	126007195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126001949_126006646
ES.19978.12	chr2	+	1434	5	NNC	ENSMUSG00000023330.13	novel	1276	4	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	84.4019401435773	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7373	False	NA	25	True	ATTAAA	-23	NA	125994154	126007196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125994321_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.13	chr2	+	1083	4	NNC	ENSMUSG00000023330.13	novel	1276	4	NA	NA	95	-5156	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.7826889938944	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGCATTTGCTCCAT	7374	False	NA	NA	False	AAGAAA	-11	NA	125994155	126002040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125994429_125996465_125996781_126000329_126000474_126001689
ES.19978.14	chr2	+	1534	5	NNC	ENSMUSG00000023330.13	novel	1276	4	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.1172892048978	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7381	False	NA	25	True	ATTAAA	-23	NA	125994162	126007196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125994429_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.15	chr2	+	2940	4	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	749	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.2300397848169	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCGCCCTTACCTTT	NA	False	NA	23	True	ATTAAA	-21	NA	125997209	126007194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125997329_125998459_126000474_126001689_126001949_126006646
ES.19978.2	chr2	+	2290	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	19	-967	19	964	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	7298	False	NA	NA	False	NA	NA	NA	125994079	126008163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.3	chr2	+	5092	4	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	19	929	19	-929	5prime_fragment	FALSE	canonical	3	175	junction_1	16.739839372653	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGGATAATGAAGTTC	7298	False	NA	NA	False	AATAAA	-32	NA	125994079	126006267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689
ES.19978.4	chr2	+	1175	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCGCCCTTACCTTT	7300	False	NA	23	True	ATTAAA	-21	NA	125994081	126007194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
ES.19978.5	chr2	+	5373	4	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	30	637	30	-637	5prime_fragment	FALSE	canonical	3	175	junction_1	16.739839372653	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTGTACCAGTTATT	7309	False	NA	NA	False	ATTAAA	-21	NA	125994090	126006559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689
ES.19978.6	chr2	+	1672	5	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	62.1867148191637	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7312	False	NA	25	True	ATTAAA	-23	NA	125994093	126007196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125994498_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.7	chr2	+	1303	5	NNC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5462304205099	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7312	False	NA	25	True	ATTAAA	-23	NA	125994093	126007196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_125994129_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ES.19978.8	chr2	+	6008	4	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	33	-1	33	1	intron_retention	FALSE	canonical	3	175	junction_1	16.739839372653	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	7312	False	NA	26	True	ATTAAA	-24	NA	125994093	126007197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689
ES.19978.9	chr2	+	3636	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	-2365	5	35	-2	multi-exon	FALSE	canonical	3	183	junction_3	13.6381816969859	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTCGCCCTTACCTTT	7314	False	NA	23	True	ATTAAA	-21	NA	125994095	126007194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ES.19979.1	chr2	+	178	1	Intergenic	novelGene_16554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACACAATTATG	NA	False	NA	NA	False	NA	NA	NA	126336502	126336680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126336500_126336700
ES.1998.1	chr1	+	1753	6	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTCTCCTTTCTTTC	NA	False	NA	NA	False	AGTAAA	-28	NA	178158942	178162507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159040_178159397_178159519_178159655_178159924_178160563_178160673_178161109_178161207_178161446
ES.1998.2	chr1	+	2268	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	178158945	178161213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178158900_178161200
ES.1998.3	chr1	+	5038	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGACACCGCCCGGGCCC	NA	False	NA	NA	False	AAAAAG	-19	NA	178158945	178163983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178158900_178164000
ES.1998.4	chr1	+	3136	7	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGACACCGCCCGGGCCC	NA	False	NA	NA	False	AAAAAG	-19	NA	178158945	178163983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159041_178159397_178159525_178159661_178159924_178160563_178160673_178161109_178161207_178161446_178163521_178163611
ES.1998.5	chr1	+	3571	5	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCGGGAC	NA	False	NA	NA	False	AAAAAG	-6	NA	178158945	178163970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159525_178159661_178159924_178160563_178160673_178161109_178161207_178161446
ES.1998.6	chr1	+	3273	6	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGACACCGCCCGGGCCC	NA	False	NA	NA	False	AAAAAG	-19	NA	178158945	178163983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159041_178159397_178159924_178160563_178160673_178161109_178161207_178161446_178163521_178163611
ES.1998.7	chr1	+	1796	3	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACAACTGCCATGACTT	NA	False	NA	NA	False	NA	NA	NA	178158945	178161235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159041_178159397_178159525_178159661
ES.1998.8	chr1	+	3664	5	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGACACCGCCCGGGCCC	NA	False	NA	NA	False	AAAAAG	-19	NA	178158945	178163983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159041_178159397_178159525_178159661_178159924_178160563_178161207_178161446
ES.1998.9	chr1	+	4288	4	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCGGGAC	NA	False	NA	NA	False	AAAAAG	-6	NA	178158948	178163970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178159041_178159397_178159525_178159661_178161207_178161446
ES.19980.1	chr2	+	2411	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	199	308	199	-3	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCCCTGGTGGTTTAG	NA	False	NA	NA	False	GATAAA	-15	NA	126394525	126429855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ES.19980.2	chr2	+	2382	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	537	-1	537	1	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGAGGCTTCGCTGTCTC	NA	False	NA	17	True	AATAAA	-17	NA	126394863	126430164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ES.19980.3	chr2	+	5298	9	NIC	ENSMUSG00000027359.17	novel	2918	10	NA	NA	583	0	intron_retention	FALSE	canonical	3	64	junction_1	9.58840445538255	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	126394909	126430163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ES.19980.4	chr2	+	3706	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	619	-1407	-564	1407	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATCAGATTCTGACGAG	NA	False	NA	NA	False	NA	NA	NA	126394945	126431570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ES.19980.5	chr2	+	5128	9	NIC	ENSMUSG00000027359.17	novel	2918	10	NA	NA	-536	-106	intron_retention	FALSE	canonical	3	64	junction_1	9.58840445538255	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTTTTCAATGT	NA	False	NA	-90	True	AGTAAA	-10	NA	126394973	126430057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ES.19981.1	chr2	+	177	1	Intergenic	novelGene_16555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTTTTGG	NA	False	NA	NA	False	NA	NA	NA	126463805	126463982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126463800_126464000
ES.19982.1	chr2	+	3253	1	Intergenic	novelGene_16558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAGTAA	NA	False	NA	NA	False	NA	NA	NA	126510850	126514103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126510800_126514100
ES.19982.2	chr2	+	1771	1	Intergenic	novelGene_16557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTACATTTCTCATCTA	NA	False	NA	NA	False	TTTAAA	-38	NA	126510850	126512621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126510800_126512600
ES.19983.1	chr2	+	662	2	Genic_Genomic	ENSMUSG00000098024.2	novel	497	2	NA	NA	-360	-3	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATTGGTAGTAATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	126517475	126525722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_126517737_126525321
ES.19983.2	chr2	+	3558	1	Genic_Genomic	ENSMUSG00000098024.2	novel	NA	NA	NA	NA	-48	-4380	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACACAAAAGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	126517787	126521345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_126517800_126521300
ES.19984.1	chr2	+	4319	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	-157	-17	-142	17	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTCTTCTTTTTT	3419	False	NA	23	True	ATTAAA	-37	NA	126549105	126601234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.11	chr2	+	6859	18	NIC	ENSMUSG00000027363.16	novel	4154	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	323	junction_8	41.8499544219717	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCATTTGAAACCT	3593	False	NA	-1	True	ATTAAA	-13	NA	126549279	126601210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.12	chr2	+	4144	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	96.7384790728763	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTACATGTTTTGTCTT	3593	False	NA	16	True	ATTAAA	-30	NA	126549279	126601227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600334
ES.19984.13	chr2	+	378	2	ISM	ENSMUSG00000027363.16	ENSMUST00000138859.2	3463	17	32	41004	0	-41004	5prime_fragment	FALSE	canonical	3	389	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGAAAAATGATGTGAT	3593	False	NA	NA	False	AATAAA	-17	NA	126549279	126560164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126549408_126559914
ES.19984.14	chr2	+	4254	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	119.650321545675	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGTCTTCTTTTTT	3593	False	NA	23	True	ATTAAA	-37	NA	126549279	126601234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126562540_126562650_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.16	chr2	+	4110	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	96.9371216591227	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3593	False	NA	6	True	ATTAAA	-20	NA	126549279	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600057_126600173_126600340
ES.19984.17	chr2	+	3991	18	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	127.463598168777	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3597	False	NA	6	True	ATTAAA	-20	NA	126549283	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579488_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.18	chr2	+	4075	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	5	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	126.866618497101	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTACATGTTTTGTCTT	3598	False	NA	16	True	ATTAAA	-30	NA	126549284	126601227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575882_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600118_126600340
ES.19984.19	chr2	+	4075	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	94.4124269955557	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCTTGTACATGTTTT	3598	False	NA	11	True	ATTAAA	-25	NA	126549284	126601222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126597928_126597980_126598036_126600039_126600173_126600340
ES.19984.2	chr2	+	3358	18	ISM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	-17	972	-2	-923	5prime_fragment	FALSE	canonical	3	323	junction_9	43.3777963708748	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAGGAGAGTGAGAATAA	3559	False	NA	NA	False	AATAAA	-27	NA	126549245	126600245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039
ES.19984.20	chr2	+	7883	16	NIC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	5	12	intron_retention	FALSE	canonical	3	328	junction_6	41.5567082430743	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACATGTTTTGTCTTCT	3598	False	NA	18	True	ATTAAA	-32	NA	126549284	126601229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.22	chr2	+	4280	18	ISM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	23	10	6	-3	intron_retention	FALSE	canonical	3	323	junction_9	43.3777963708748	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAATCATTTGAAA	3599	False	NA	-4	True	ATTAAA	-10	NA	126549285	126601207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039
ES.19984.24	chr2	+	4226	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	121.527774603175	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560108_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.25	chr2	+	4073	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.4124269955557	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAACCTTGTACATGTT	3599	False	NA	9	True	ATTAAA	-23	NA	126549285	126601220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584322_126584373_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.26	chr2	+	4236	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	123.08382838076	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTACATGTTTTGTCTT	3599	False	NA	16	True	ATTAAA	-30	NA	126549285	126601227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126577897_126578002_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.29	chr2	+	5540	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.9995498960642	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126561503_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.30	chr2	+	3731	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	94.4124269955557	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340_126600474_126600864
ES.19984.31	chr2	+	3649	16	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	104.834769465521	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571184_126579393_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.33	chr2	+	4313	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	144.830878542876	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3599	False	NA	6	True	ATTAAA	-20	NA	126549285	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126583458_126583569_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.35	chr2	+	4151	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	13	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	96.8481852574137	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3606	False	NA	21	True	ATTAAA	-35	NA	126549292	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596747_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.36	chr2	+	3993	18	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	98.3952906291408	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3606	False	NA	6	True	ATTAAA	-20	NA	126549292	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560108_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.37	chr2	+	6685	18	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	13	15	intron_retention	FALSE	canonical	0	0	junction_14	128.443570742377	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3606	False	NA	21	True	ATTAAA	-35	NA	126549292	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579463_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126593989_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.39	chr2	+	4167	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	13	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.7849212824721	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTACATGTTTTGTCTT	3606	False	NA	16	True	ATTAAA	-30	NA	126549292	126601227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571285_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.4	chr2	+	4295	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	122.669160719758	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGTACATGTTTTGT	3567	False	NA	13	True	ATTAAA	-27	NA	126549253	126601224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126556490_126556625_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.42	chr2	+	4251	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	19	10	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	137.056390925884	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTACATGTTTTGTCTT	3612	False	NA	16	True	ATTAAA	-30	NA	126549298	126601227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560108_126561944_126562090_126562540_126562650_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.43	chr2	+	4261	20	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	158.371001010977	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATCATTTGAAAC	3617	False	NA	-3	True	ATTAAA	-11	NA	126549303	126601208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126562540_126562675_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592948_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.44	chr2	+	4105	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	24	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	96.9770241339491	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3617	False	NA	21	True	ATTAAA	-35	NA	126549303	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579344_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.45	chr2	+	4030	18	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	127.18256501695	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAATCATTTGAAA	3617	False	NA	-4	True	ATTAAA	-10	NA	126549303	126601207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.46	chr2	+	4032	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	28	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	96.5705301008057	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGTACATGTTTTGT	3621	False	NA	13	True	ATTAAA	-27	NA	126549307	126601224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579853_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.47	chr2	+	4064	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	31	16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	96.5684846221697	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTTGTCTTCTTTTT	3624	False	NA	22	True	ATTAAA	-36	NA	126549310	126601233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592948_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.49	chr2	+	4119	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	64	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	90.9388615675932	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAATCATTTGAAA	3657	False	NA	-4	True	ATTAAA	-10	NA	126549343	126601207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597071_126597892_126598036_126600039_126600173_126600340
ES.19984.5	chr2	+	4243	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	-2	15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	95.8447819248509	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3574	False	NA	21	True	ATTAAA	-35	NA	126549260	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574105_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.50	chr2	+	4934	13	NIC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	21853	6	intron_retention	FALSE	canonical	3	328	junction_2	45.0120354275757	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGTACATGTTTTG	2728	False	NA	12	True	ATTAAA	-26	NA	126571132	126601223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.51	chr2	+	3202	12	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	29044	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.255032024746	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAAAAAATCATTTGA	484	False	NA	-6	True	ATTAAA	-8	NA	126578323	126601205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126578432_126579309_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.52	chr2	+	2315	3	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	46722	3	46722	-3	intron_retention	FALSE	canonical	3	375	junction_2	62.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAATCATTTGAAA	7899	False	NA	-4	True	ATTAAA	-10	NA	126596001	126601207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126597006_126597892_126598036_126600039
ES.19984.53	chr2	+	5218	1	Genic_Genomic	ENSMUSG00000027363.16	novel	NA	NA	NA	NA	46735	15	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	7912	False	NA	21	True	ATTAAA	-35	NA	126596014	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_126596000_126601200
ES.19984.54	chr2	+	5584	4	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	47299	-4011	47299	4004	3prime_fragment	FALSE	canonical	3	375	junction_2	55.7275116576683	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAAATTTTCATTT	8476	False	NA	NA	False	AATAAA	-3	NA	126596578	126605221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.7	chr2	+	4180	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	3	15	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	90.2496537389479	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3579	False	NA	21	True	ATTAAA	-35	NA	126549265	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560108_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.8	chr2	+	4371	21	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	151.627990489883	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3587	False	NA	6	True	ATTAAA	-20	NA	126549273	126601217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126549408_126559914_126560085_126561944_126562090_126562540_126562675_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126593989_126594093_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19984.9	chr2	+	4004	18	NIC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	-6	15	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	96.2776406183958	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTTTTGTCTTCTTTT	3587	False	NA	21	True	ATTAAA	-35	NA	126549273	126601232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126549408_126559914_126560085_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ES.19985.1	chr2	+	175	1	Intergenic	novelGene_16564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTAAATGAAAGAA	2448	False	NA	NA	False	NA	NA	NA	126610227	126610402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126610200_126610400
ES.19986.1	chr2	+	5937	7	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGGAAAACTAAAAC	4167	False	NA	NA	False	NA	NA	NA	126641263	126660263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_126644540_126646935_126647008_126649208_126649302_126652084_126652150_126654614_126655331_126656609_126656741_126658679
ES.19986.2	chr2	+	2156	6	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAATCATAGGTT	NA	False	NA	NA	False	NA	NA	NA	126654935	126664245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_126655331_126656609_126656741_126658679_126658865_126661380_126661537_126661756_126661884_126663083
ES.19986.3	chr2	+	1966	5	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCTAAA	NA	False	NA	NA	False	NA	NA	NA	126654937	126664213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_126655331_126656609_126656741_126658679_126658865_126661756_126661884_126663083
ES.19986.4	chr2	+	160	1	Intergenic	novelGene_16567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	126657238	126657398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126657200_126657400
ES.19986.5	chr2	+	2389	1	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATAGGTTCAGAGTA	NA	False	NA	NA	False	NA	NA	NA	126661863	126664252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_126661900_126664300
ES.19986.6	chr2	+	3245	12	Antisense	novelGene_ENSMUSG00000027365.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126663083	126680636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_126663257_126664387_126664667_126665893_126666027_126667333_126667475_126667552_126667704_126668628_126668864_126670929_126671211_126672048_126672184_126673116_126673261_126675611_126675668_126677377_126677516_126679257
ES.19987.1	chr2	-	4085	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	68	0	2	0	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGGTTTCCAGGCCA	NA	False	NA	NA	False	AATAAA	-15	NA	126517420	126469361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.10	chr2	-	3837	1	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	30541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126474669	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126470800_126474700
ES.19987.100	chr2	-	6966	38	NIC	ENSMUSG00000027365.15	novel	6985	39	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	77.6905137325796	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718144	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.101	chr2	-	7116	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.3241263019926	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718149	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634890_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.102	chr2	-	7050	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	69.680453865984	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718181	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663243_126664458_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.104	chr2	-	6873	38	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	80.716504675934	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGATGTTTAATGAGTTT	NA	False	NA	-20	True	ATTAAA	-31	NA	126718130	126633488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639202_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.107	chr2	-	2142	13	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-2286	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.8418193388366	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTTTACAGATGTTT	NA	False	NA	-29	True	ATTAAA	-22	NA	126649265	126633497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634002_126634276_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208
ES.19987.109	chr2	-	8206	38	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	17	3	intron_retention	FALSE	non_canonical	0	0	junction_10	70.2998066823539	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTTGTTTACAGATG	NA	False	NA	-32	True	ATTAAA	-19	NA	126718133	126633500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644538_126646932_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.11	chr2	-	2355	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	223	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	170.132601346174	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126518034	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126495474_126495643_126500389_126500498_126517953
ES.19987.110	chr2	-	6386	36	NNC	ENSMUSG00000027365.15	novel	6985	39	NA	NA	-14319	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	107.85252970267	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATTAAATTTATTC	NA	False	NA	-45	True	ATTAAA	-6	NA	126690433	126633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126642208_126642258_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661380_126661540_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416
ES.19987.111	chr2	-	232	1	Intergenic	novelGene_16565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGTAATATACATGC	NA	False	NA	NA	False	ATTAAA	-9	NA	126640498	126640266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126640300_126640500
ES.19987.112	chr2	-	5001	31	NNC	ENSMUSG00000027365.15	novel	2201	14	NA	NA	22	-4129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.6018814058775	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCATCAATTTAGCACC	NA	False	NA	NA	False	AATAAA	-17	NA	126718084	126643331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126643559_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.113	chr2	-	5355	31	NNC	ENSMUSG00000027365.15	novel	2201	14	NA	NA	2	-4135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.6018814058775	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGTTGCCATCAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	126718148	126643337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126643855_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.114	chr2	-	175	1	Intergenic	novelGene_16566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	126646670	126646495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126646500_126646700
ES.19987.115	chr2	-	2025	1	NIC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	380	-2257	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCATCTTTATACTACT	NA	False	NA	NA	False	NA	NA	NA	126659206	126657181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126657200_126659200
ES.19987.116	chr2	-	6241	23	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-12	-2284	intron_retention	FALSE	canonical	1	1	junction_19	61.3358186105647	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126718118	126657208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126658865_126661756_126661884_126663083_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126691975_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.117	chr2	-	3347	21	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	-31	30831	-31	6872	5prime_fragment	FALSE	canonical	3	201	junction_15	22.1288838399048	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCCACAAATTTCTA	NA	False	NA	NA	False	CATAAA	-24	NA	126718181	126664315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.118	chr2	-	3076	21	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	12	31059	12	6644	5prime_fragment	FALSE	canonical	3	201	junction_15	22.1288838399048	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGAACTATATTAATG	NA	False	NA	NA	False	NA	NA	NA	126718138	126664543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.119	chr2	-	2969	19	ISM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	-5	33717	-5	3986	5prime_fragment	FALSE	canonical	3	201	junction_13	22.2866427360526	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAATAATTTTGG	NA	False	NA	NA	False	AATACA	-7	NA	126718155	126667201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.120	chr2	-	3409	9	ISM	ENSMUSG00000027365.15	ENSMUST00000134408.2	2201	14	-36	9983	8	-9980	5prime_fragment	FALSE	canonical	3	201	junction_3	25.5804490773716	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGATCACTGTTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	126718142	126682743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.121	chr2	-	6830	6	NNC	ENSMUSG00000027365.15	novel	2201	14	NA	NA	-11	-14595	intron_retention	TRUE	non_canonical	0	0	junction_1	106.484552870358	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGCTTTCCTTAAACT	NA	False	NA	NA	False	AAAACA	-40	NA	126718117	126687358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126688922_126689131_126690542_126691818_126692033_126693262_126696602_126700332_126700413_126717893
ES.19987.122	chr2	-	3972	6	NIC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	0	-14595	intron_retention	FALSE	canonical	3	255	junction_3	6.11228271597445	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGCTTTCCTTAAACT	NA	False	NA	NA	False	AAAACA	-40	NA	126718150	126687358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.123	chr2	-	6236	5	NNC	ENSMUSG00000027365.15	novel	2201	14	NA	NA	-25	-14653	intron_retention	FALSE	non_canonical	0	0	junction_1	112.62548557054	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	126718175	126687416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126688922_126689131_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.124	chr2	-	1668	7	ISM	ENSMUSG00000027365.15	ENSMUST00000134408.2	2201	14	-49	14656	-5	-14653	5prime_fragment	FALSE	canonical	3	201	junction_1	24.0601099101581	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	126718155	126687416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.13	chr2	-	4596	7	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	222	junction_1	69.7224656923593	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517463	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.14	chr2	-	2440	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	136.879210866176	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517441	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126495474_126495643_126500389_126500498_126517275
ES.19987.15	chr2	-	2742	9	NNC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	130.957471627242	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517529	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481129_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.17	chr2	-	2818	10	NNC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	158.196783223371	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517463	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505072_126517275
ES.19987.18	chr2	-	2752	10	NNC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	179.742064850004	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517441	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481129_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ES.19987.19	chr2	-	6621	9	NNC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	175.316454946477	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517461	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126487933_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ES.19987.2	chr2	-	2763	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	-73	1463	-49	8	multi-exon	FALSE	canonical	3	222	junction_1	62.4468524026632	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTCATGTTTTGACTG	NA	False	NA	-2	True	ATTAAA	-22	NA	126517561	126470824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.21	chr2	-	2499	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	135.180302876249	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126517422	126470833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.22	chr2	-	2519	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	140.261417738887	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126517512	126470833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.23	chr2	-	2690	10	NNC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	158.405090951984	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126517275	126470833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505072_126517214
ES.19987.24	chr2	-	3000	9	NNC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	431	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	138.862116864176	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATGCAGACTCATG	NA	False	NA	-11	True	ATTAAA	-13	NA	126516828	126470833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126516296
ES.19987.25	chr2	-	2338	10	NNC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.142086736411	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCCATGCAGACTCAT	NA	False	NA	-12	True	ATTAAA	-12	NA	126517420	126470834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126470865_126471138_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.26	chr2	-	2488	8	NNC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	-19	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.998280202653	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTACTCTGGCCTCAT	NA	False	NA	-62	True	TATAAA	-17	NA	126517441	126470884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126494152_126494348_126495474_126495643_126500389_126500515_126517275
ES.19987.27	chr2	-	3720	1	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	22474	1539	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8838	False	NA	NA	False	NA	NA	NA	126482736	126479016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126479000_126482700
ES.19987.28	chr2	-	1427	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-81	-8	1	8	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGCAGAATTTGTTT	NA	False	NA	-9	True	NA	NA	NA	126517487	126480932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.29	chr2	-	1503	9	NIC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	161.744976738074	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGCAGAATTTGTTT	NA	False	NA	-9	True	NA	NA	NA	126517465	126480932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ES.19987.30	chr2	-	1355	9	NIC	ENSMUSG00000027361.16	novel	1991	9	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	164.706130350391	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGAGTGCAGAATTT	NA	False	NA	-13	True	NA	NA	NA	126517260	126480936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517214
ES.19987.31	chr2	-	8526	7	NIC	ENSMUSG00000027361.16	novel	1338	8	NA	NA	32	2	intron_retention	FALSE	canonical	3	353	junction_6	22.9691822521685	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGAATGAGTGCAGAAT	NA	False	NA	-15	True	NA	NA	NA	126517374	126480938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.32	chr2	-	1237	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	-38	139	20	-139	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATCACTATTATTATAT	NA	False	NA	NA	False	AATAAA	-21	NA	126517444	126481079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.33	chr2	-	948	4	ISM	ENSMUSG00000027361.16	ENSMUST00000089745.11	3254	6	49	4196	1	382	5prime_fragment	FALSE	canonical	3	353	junction_3	25.8499946271217	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGATATAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	126517463	126493863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.34	chr2	-	4072	2	ISM	ENSMUSG00000027361.16	ENSMUST00000089745.11	3254	6	49	6946	1	-1002	5prime_fragment	FALSE	canonical	3	353	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTGAGGTGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	126517463	126496613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126500498_126517275
ES.19987.35	chr2	-	175	2	Intergenic	novelGene_16556	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126687574	126496661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126496714_126687451
ES.19987.36	chr2	-	5317	1	Intergenic	novelGene_16559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATCTGCCTCATTCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	126517164	126511847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126511800_126517200
ES.19987.37	chr2	-	255	1	Intergenic	novelGene_16560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTAACTTTAGTTTA	NA	False	NA	NA	False	NA	NA	NA	126521114	126520859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126520900_126521100
ES.19987.38	chr2	-	210	1	Intergenic	novelGene_16561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAACTTTTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	126537162	126536952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126537000_126537200
ES.19987.39	chr2	-	236	1	Intergenic	novelGene_16562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGATCATCCTACT	NA	False	NA	NA	False	NA	NA	NA	126541341	126541105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126541100_126541300
ES.19987.4	chr2	-	3006	10	NIC	ENSMUSG00000027361.16	novel	2751	10	NA	NA	-195	7	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	154.912480269376	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCATGTTTTGACT	NA	False	NA	-3	True	ATTAAA	-21	NA	126517707	126470825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ES.19987.40	chr2	-	1605	1	FSM	ENSMUSG00000074846.4	ENSMUST00000188689.2	204	1	-1198	-203	-1198	203	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGATGCTAAGTATATAA	591	False	NA	NA	False	AAGAAA	-2	NA	126552675	126551070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126551100_126552700
ES.19987.41	chr2	-	4085	1	Antisense	novelGene_ENSMUSG00000027363.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGTCAATGTCACTGGG	9973	False	NA	NA	False	NA	NA	NA	126592331	126588246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_126588200_126592300
ES.19987.42	chr2	-	3453	2	Intergenic	novelGene_16563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9973	False	NA	NA	False	NA	NA	NA	126592331	126588269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126589492_126590100
ES.19987.43	chr2	-	6182	6	NNC	ENSMUSG00000027364.15	novel	1203	6	NA	NA	2952	4713	intron_retention	FALSE	canonical	1	1	junction_5	3.54400902933387	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTATTTCCATGAATT	NA	False	NA	NA	False	TTTAAA	-16	NA	126622406	126598256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126603612_126611790_126611924_126617643_126617787_126619818_126620029_126621850_126622047_126622261
ES.19987.44	chr2	-	1414	5	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	3209	-352	3203	-19	3prime_fragment	FALSE	canonical	2	5	junction_2	2.69258240356725	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAAACAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	126622155	126602988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126603612_126611790_126611924_126617643_126617787_126619818_126620029_126621850
ES.19987.45	chr2	-	1407	6	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	2602	1	2596	0	3prime_fragment	FALSE	canonical	2	5	junction_2	2.41660919471891	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACGTCTCACAGACAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	126622762	126603341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126603612_126611790_126611924_126617643_126617787_126619818_126620029_126621850_126622047_126622307
ES.19987.46	chr2	-	904	4	ISM	ENSMUSG00000027364.15	ENSMUST00000028842.9	1361	7	2955	14050	2949	2218	internal_fragment	FALSE	canonical	3	6	junction_1	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTATTCTGATCA	NA	False	NA	NA	False	TTTAAA	-26	NA	126622409	126617390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126617787_126619818_126620029_126621850_126622047_126622307
ES.19987.48	chr2	-	4819	24	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	4791	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.2577212376663	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTACTCATTCTGAAA	5141	False	NA	-7	True	ATTAAA	-44	NA	126670984	126633475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634830_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929
ES.19987.49	chr2	-	7199	39	FSM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	-83	-9	-83	9	multi-exon	FALSE	canonical	3	201	junction_33	52.8048791605273	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTACTCATTCTGAAA	NA	False	NA	-7	True	ATTAAA	-44	NA	126718233	126633475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.5	chr2	-	5464	2	ISM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	32281	-1	20069	1	3prime_fragment	FALSE	canonical	3	222	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	6433	False	NA	-9	True	ATTAAA	-15	NA	126485141	126470831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126472303_126481148
ES.19987.51	chr2	-	7099	38	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	70.4242180603259	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGAGTTTACTCATTC	NA	False	NA	-12	True	ATTAAA	-39	NA	126718138	126633480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641306_126644501_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.52	chr2	-	7023	38	NIC	ENSMUSG00000027365.15	novel	6985	39	NA	NA	-11	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	77.2038842095029	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGAGTTTACTCATT	NA	False	NA	-13	True	ATTAAA	-38	NA	126718117	126633481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.54	chr2	-	3170	3	ISM	ENSMUSG00000027365.15	ENSMUST00000136964.2	803	7	736	-1336	719	3	intron_retention	FALSE	canonical	3	330	junction_1	14	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGAGTTTACTCATT	NA	False	NA	-13	True	ATTAAA	-38	NA	126639030	126633481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126634877_126637151_126637259_126637362
ES.19987.55	chr2	-	4414	10	ISM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	71388	-9	330	3	3prime_fragment	FALSE	canonical	3	295	junction_9	29.8440390474659	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGAGTTTACTCATT	NA	False	NA	-13	True	ATTAAA	-38	NA	126646649	126633481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505
ES.19987.57	chr2	-	7074	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.520313020018	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATGAGTTTACTCATT	NA	False	NA	-13	True	ATTAAA	-38	NA	126718134	126633481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637416_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644532_126646953_126647008_126649208_126649300_126652082_126652152_126654615_126655329_126656607_126656741_126658675_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.58	chr2	-	6924	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	82.4399260840424	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAATGAGTTTACTCAT	NA	False	NA	-14	True	ATTAAA	-37	NA	126718155	126633482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664602_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675685_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.6	chr2	-	8969	5	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	17	1	intron_retention	FALSE	canonical	3	222	junction_1	79.6692381035491	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517389	126470831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126495643_126500389_126500498_126517275
ES.19987.60	chr2	-	7099	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	68.8864385256081	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAATGAGTTTACTCA	NA	False	NA	-15	True	ATTAAA	-36	NA	126718135	126633483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686213_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.62	chr2	-	4556	9	ISM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	72681	-7	-811	1	intron_retention	FALSE	canonical	3	317	junction_8	24.1194941903847	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAATGAGTTTACTCA	NA	False	NA	-15	True	ATTAAA	-36	NA	126645356	126633483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042
ES.19987.65	chr2	-	7070	40	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	68.9440024705564	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718156	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655155_126655197_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.66	chr2	-	7057	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	67.2171873631165	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718135	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639202_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.67	chr2	-	7079	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.1940408165604	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718136	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639455_126639577_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.68	chr2	-	7120	40	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.0797888784517	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718117	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639577_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126683419_126683462_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.69	chr2	-	7086	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	69.5166334546618	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718136	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672177_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.7	chr2	-	2602	9	NNC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	138.862116864176	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCAGACTCATGTT	NA	False	NA	-9	True	ATTAAA	-15	NA	126517420	126470831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500485_126517275
ES.19987.70	chr2	-	7048	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	68.7835790572316	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718104	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658848_126661752_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.71	chr2	-	6930	38	NIC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	69.2030285990099	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718117	126633484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.72	chr2	-	6190	40	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.9440024705564	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTAATGAGTTTACT	NA	False	NA	-17	True	ATTAAA	-34	NA	126718155	126633485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126633700_126634620_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.73	chr2	-	7125	40	NIC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	79.5875957944405	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTAATGAGTTTACT	NA	False	NA	-17	True	ATTAAA	-34	NA	126718120	126633485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126642208_126642258_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.74	chr2	-	6786	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	69.6104515029802	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTAATGAGTTTACT	NA	False	NA	-17	True	ATTAAA	-34	NA	126718181	126633485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655083_126656712_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.8	chr2	-	2944	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	222	junction_1	66.7294262415811	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517423	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ES.19987.80	chr2	-	7078	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	69.3369867280938	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTAATGAGTTTACT	NA	False	NA	-17	True	ATTAAA	-34	NA	126718129	126633485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675655_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.84	chr2	-	6911	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.6565044580587	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718144	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639106_126639399_126639470_126639622_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672182_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.87	chr2	-	7015	40	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	91.1619347992599	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718136	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658748_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126683419_126683462_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.89	chr2	-	4052	21	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	84.1583477737057	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718144	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126673134_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.9	chr2	-	2307	7	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	147.845264456533	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517420	126470832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126495474_126495643_126500389_126500498_126517275
ES.19987.92	chr2	-	7002	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_35	69.7067909432152	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718106	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126691975_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.94	chr2	-	7010	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	68.6839282107527	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718135	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688103_126690432_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.95	chr2	-	7598	36	NIC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_12	70.3649147266576	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718118	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.97	chr2	-	7211	40	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	80.2427038349137	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718155	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126650981_126651084_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19987.99	chr2	-	7055	39	NNC	ENSMUSG00000027365.15	novel	7107	39	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	80.5073636108391	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	False	NA	-19	True	ATTAAA	-32	NA	126718144	126633487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126634877_126637151_126637259_126637362_126637430_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126691975_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ES.19988.1	chr2	-	5340	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	265	11	265	-11	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAAATGAATTTGT	8544	False	NA	NA	False	AATAAA	-10	NA	126774890	126732321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.2	chr2	-	5444	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	215	-11	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAAATGAATTTGT	8494	False	NA	NA	False	AATAAA	-10	NA	126774940	126732321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.3	chr2	-	3599	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	204	1813	204	-1813	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCACATTGAAATAAGA	8483	False	NA	NA	False	ATTAAA	-17	NA	126774951	126734123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.4	chr2	-	3561	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	200	-1909	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTAGTAACATCTGC	8479	False	NA	NA	False	AATAAA	-18	NA	126774955	126734219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.5	chr2	-	2640	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	211	1054	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCATTAAGTAAGATTTC	8490	False	NA	NA	False	ATTAAA	-35	NA	126774944	126735129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.6	chr2	-	2590	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	177	2849	177	1024	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTCTGATCT	8456	False	NA	NA	False	ATTAAA	-18	NA	126774978	126735159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.7	chr2	-	2097	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	201	3318	201	555	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCCTCTACAGAAATAAA	8480	False	NA	NA	False	ATTAAA	-17	NA	126774954	126735628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.8	chr2	-	2002	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	215	420	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAAAGCT	8494	False	NA	NA	False	NA	NA	NA	126774940	126735763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19988.9	chr2	-	2083	8	NNC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	181	-3627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.7266595214818	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	8460	False	NA	NA	False	AATAAA	-12	NA	126774974	126760420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126761661_126762237_126762335_126765375_126765499_126767677_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ES.19989.1	chr2	-	176	1	Intergenic	novelGene_16568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	126799101	126798925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126798900_126799100
ES.1999.1	chr1	+	2338	1	Antisense	novelGene_ENSMUSG00000039630.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTTATATAGAATTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	178164165	178166503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_178164200_178166500
ES.19990.1	chr2	-	177	1	Intergenic	novelGene_16569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGCTT	9094	False	NA	NA	False	NA	NA	NA	126801145	126800968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126801000_126801100
ES.19991.1	chr2	-	242	1	Intergenic	novelGene_16570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACATTTATTTATTTAA	3469	False	NA	NA	False	ACTAAA	-41	NA	126840960	126840718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126840700_126841000
ES.19992.1	chr2	+	6417	22	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-4529	1591	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	13.2049945886459	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGTCTGTATGTTTG	NA	False	NA	88	True	NA	NA	NA	126846107	126911420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126846213_126850528_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.10	chr2	+	6098	21	NIC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-9	1506	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.7268218423546	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850627	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126892852_126892933_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.11	chr2	+	5348	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	-21	-727	-8	727	multi-exon	FALSE	canonical	3	34	junction_11	7.58468852359805	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGATATTTTAAAACTT	NA	False	NA	NA	False	AATAAA	-18	NA	126850628	126910556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.12	chr2	+	6008	21	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-2	1506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.712311985949	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850634	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902294_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.14	chr2	+	6103	21	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	0	1505	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	13.2222350606847	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCTGTATGTTCTTT	NA	False	NA	2	True	AATAAA	-15	NA	126850649	126911334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888212_126888771_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.16	chr2	+	5988	20	NIC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	0	1511	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	13.6355409808095	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGTTCTTTATAATT	NA	False	NA	8	True	AATAAA	-21	NA	126850649	126911340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.17	chr2	+	5875	19	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	1	1513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1046341520004	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTCTTTATAATTTA	NA	False	NA	10	True	AATAAA	-23	NA	126850650	126911342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850817_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.18	chr2	+	6071	20	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	3	1507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.9708948749624	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTGTATGTTCTTTAT	NA	False	NA	4	True	AATAAA	-17	NA	126850652	126911336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126851590_126851796_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126888067_126888208_126888765_126888879_126888962_126889077_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.2	chr2	+	3254	1	Intergenic	novelGene_16572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTAGTGCTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	126846128	126849382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126846100_126849400
ES.19992.20	chr2	+	6132	21	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	4	1506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	13.4725647150051	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850653	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906980_126908461
ES.19992.22	chr2	+	3645	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	6	949	6	-949	multi-exon	FALSE	canonical	3	34	junction_11	7.58468852359805	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGGAGGGACTGAAAAT	NA	False	NA	NA	False	TATAAA	-24	NA	126850655	126908880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.23	chr2	+	6021	20	NIC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-11	1506	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.2242537190797	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850660	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126850821_126853710_126853783_126856089_126856214_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.26	chr2	+	6123	21	NNC	ENSMUSG00000001998.16	novel	659	5	NA	NA	2632	1505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.2348484182484	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCTGTATGTTCTTT	NA	False	NA	2	True	AATAAA	-15	NA	126853305	126911334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126853608_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902294_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.28	chr2	+	5261	14	NIC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-14269	1505	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	14.7796437650738	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCTGTATGTTCTTT	NA	False	NA	2	True	AATAAA	-15	NA	126876961	126911334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126877131_126879705_126879780_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.29	chr2	+	5193	11	ISM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	37133	-1505	-3448	1505	3prime_fragment	FALSE	canonical	3	34	junction_1	7.58221603490694	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCTGTATGTTCTTT	NA	False	NA	2	True	AATAAA	-15	NA	126887782	126911334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.3	chr2	+	4910	22	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-4151	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.38188439391	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACAGAGCTGTCATC	NA	False	NA	NA	False	NA	NA	NA	126846485	126909829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126846675_126850528_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.4	chr2	+	6606	23	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-4136	1506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2110935582147	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126846500	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126846675_126850528_126850821_126851590_126851796_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.5	chr2	+	6380	22	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-4115	1506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.38188439391	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126846521	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126846675_126850528_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.6	chr2	+	3480	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	-29	1149	-16	-1149	multi-exon	FALSE	canonical	3	34	junction_11	7.58468852359805	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAAAAGCACTCGTGG	NA	False	NA	NA	False	CATAAA	-24	NA	126850620	126908680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.7	chr2	+	6135	21	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-14	1506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	17.2333252740149	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCTGTATGTTCTTTA	NA	False	NA	3	True	AATAAA	-16	NA	126850622	126911335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888197_126888756_126888883_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19992.8	chr2	+	3562	21	NNC	ENSMUSG00000001998.16	novel	4600	21	NA	NA	-14	-952	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.712311985949	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTGGAGGGACTGAA	NA	False	NA	NA	False	TATAAA	-21	NA	126850622	126908877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902294_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ES.19993.1	chr2	+	1066	6	NIC	ENSMUSG00000001999.16	novel	772	7	NA	NA	-11	417	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATATTGTGAGTCGA	2198	False	NA	NA	False	NA	NA	NA	126912573	126932686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
ES.19993.10	chr2	+	4335	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	28	-2903	0	424	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGTCGATTTTGAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126932693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.11	chr2	+	4213	4	NIC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	422	intron_retention	FALSE	canonical	1	1	junction_3	71.4345076898336	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGAGTCGATTTTG	2237	False	NA	NA	False	NA	NA	NA	126912612	126932691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126928764
ES.19993.12	chr2	+	4475	6	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	1	423	intron_retention	FALSE	canonical	2	3	junction_1	89.2972563968233	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGAGTCGATTTTGA	2238	False	NA	NA	False	NA	NA	NA	126912613	126932692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912646_126916018_126916166_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.13	chr2	+	1273	9	NIC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	71.9165097526291	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAACGAGAATAGTGT	2238	False	NA	NA	False	AATAAA	-12	NA	126912613	126938996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126912651_126920849_126920998_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ES.19993.14	chr2	+	2599	6	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	1	884	intron_retention	FALSE	canonical	0	0	junction_1	92.2075918783264	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCTGGGATTCATTTAAG	2238	False	NA	NA	False	NA	NA	NA	126912613	126930674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912651_126913962_126914247_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.15	chr2	+	2159	4	NIC	ENSMUSG00000001999.16	novel	1460	5	NA	NA	1	847	intron_retention	FALSE	canonical	0	0	junction_2	80.9499159288562	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAGGTAAA	2238	False	NA	NA	False	NA	NA	NA	126912613	126930637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126912651_126922449_126922579_126927882_126928003_126928764
ES.19993.16	chr2	+	1421	10	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	74.7734025465945	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGTGTTGATGACTGT	2242	False	NA	NA	False	AATAAA	-22	NA	126912617	126939006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912646_126916018_126916166_126920849_126920998_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ES.19993.17	chr2	+	6215	7	NIC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	7	-8	intron_retention	FALSE	canonical	3	72	junction_1	52.3725967361643	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAACGAGAATAGTGT	2244	False	NA	NA	False	AATAAA	-12	NA	126912619	126938996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126934067_126937005_126937178_126938654
ES.19993.18	chr2	+	4968	7	NNC	ENSMUSG00000001999.16	novel	1460	5	NA	NA	45	417	intron_retention	FALSE	canonical	0	0	junction_1	91.9293206762674	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATATTGTGAGTCGA	2282	False	NA	NA	False	NA	NA	NA	126912657	126932686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126913041_126916018_126916166_126920849_126920998_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.19	chr2	+	1265	8	NNC	ENSMUSG00000001999.16	novel	1460	5	NA	NA	63	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	65.537028013302	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAACGAGAATAGTGT	2300	False	NA	NA	False	AATAAA	-12	NA	126912675	126938996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912853_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ES.19993.20	chr2	+	2891	5	ISM	ENSMUSG00000001999.16	ENSMUST00000142737.3	676	6	-548	3429	-548	847	5prime_fragment	FALSE	canonical	0	0	junction_1	81.6436617258192	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	126921648	126930637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_126922299_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.3	chr2	+	1381	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	5	74	3	-74	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATACTGTATGTTTAGT	2214	False	NA	NA	False	ATTAAA	-25	NA	126912589	126929716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.4	chr2	+	2297	5	NNC	ENSMUSG00000001999.16	novel	1460	5	NA	NA	3	847	intron_retention	FALSE	canonical	3	18	junction_1	73.8896981994107	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAGGTAAA	2214	False	NA	NA	False	NA	NA	NA	126912589	126930637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19993.5	chr2	+	1153	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	6	1	6	-1	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGAATAGTGTTGATGAC	2217	False	NA	NA	False	AATAAA	-19	NA	126912592	126939003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ES.19993.6	chr2	+	2443	6	NNC	ENSMUSG00000001999.16	novel	657	6	NA	NA	-3	847	intron_retention	FALSE	canonical	2	5	junction_1	88.7977477191849	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAGGTAAA	2220	False	NA	NA	False	NA	NA	NA	126912595	126930637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_126912651_126916018_126916166_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ES.19994.1	chr2	-	244	1	Intergenic	novelGene_16571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACATGCAGGGATGTT	154	False	NA	NA	False	NA	NA	NA	126844275	126844031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126844000_126844300
ES.19994.2	chr2	-	174	2	Antisense	novelGene_ENSMUSG00002076437.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	201	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	9592	False	NA	NA	False	NA	NA	NA	126924281	126844097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_126844224_126924233
ES.19994.3	chr2	-	177	1	Intergenic	novelGene_16573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	7848	False	NA	NA	False	NA	NA	NA	126868390	126868213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126868200_126868400
ES.19995.1	chr2	-	179	1	Intergenic	novelGene_16574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTTTTTAA	6920	False	NA	-21	True	NA	NA	NA	126935070	126934891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_126934900_126935100
ES.19996.1	chr2	-	2676	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	4	15	4	3	multi-exon	FALSE	canonical	3	394	junction_9	30.9044738701424	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCCCAGTAAACAGTC	NA	False	NA	-2	True	AATAAA	-19	NA	126975870	126945743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.11	chr2	-	2100	5	NIC	ENSMUSG00000034906.16	novel	2024	6	NA	NA	1083	1	intron_retention	FALSE	canonical	3	440	junction_3	27.7882619103822	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126955507	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126949391_126950404_126950579_126955479
ES.19996.12	chr2	-	7846	5	NIC	ENSMUSG00000034906.16	novel	2264	17	NA	NA	-4	1	intron_retention	FALSE	canonical	3	440	junction_3	13.6106575888162	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126958806	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126947842_126948023_126948116_126949273_126949391_126950404_126955591_126958451
ES.19996.13	chr2	-	3372	17	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	18	1	intron_retention	FALSE	canonical	3	394	junction_9	31.4699757705658	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975856	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.15	chr2	-	6187	8	NNC	ENSMUSG00000034906.16	novel	2264	17	NA	NA	-1230	-1	intron_retention	FALSE	canonical	0	0	junction_7	164.443402582959	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAGTGCCCAGTAAAC	NA	False	NA	-6	True	AATAAA	-15	NA	126960032	126945747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126955591_126958451_126958575_126959425_126959530_126959996
ES.19996.16	chr2	-	3704	3	NIC	ENSMUSG00000034906.16	novel	2024	6	NA	NA	5799	-1	intron_retention	FALSE	canonical	3	470	junction_2	1.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAGTGCCCAGTAAAC	NA	False	NA	-6	True	AATAAA	-15	NA	126950791	126945747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126947842_126948023_126948116_126949273
ES.19996.17	chr2	-	2817	19	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	171.923908305138	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAGTGCCCAGTAAAC	NA	False	NA	-6	True	AATAAA	-15	NA	126975845	126945747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949385_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975318_126975495_126975768
ES.19996.18	chr2	-	3418	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	112.173678980656	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAGTGCCCAGTAAAC	NA	False	NA	-6	True	AATAAA	-15	NA	126975836	126945747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968908_126969023_126969115_126969404_126969643_126975768
ES.19996.19	chr2	-	2812	18	Fusion	ENSMUSG00000074825.5_ENSMUSG00000034906.16	novel	2695	18	NA	NA	-15	-2	multi-exon	FALSE	canonical	1	2	junction_17	111.535678652424	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAGTGCCCAGTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	126985377	126945748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126985134
ES.19996.2	chr2	-	2766	19	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-25	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	147.435788492466	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCCCAGTAAACAGTC	NA	False	NA	-2	True	AATAAA	-19	NA	126975847	126945743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126968258_126968372_126969023_126969115_126969404_126969643_126975768
ES.19996.20	chr2	-	2651	17	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	154.751413563819	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAGTGCCCAGTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	126975869	126945748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966964_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.21	chr2	-	2640	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.85507182701	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAGTGCCCAGTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	126975846	126945748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948109_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.22	chr2	-	2830	17	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-25	-2	intron_retention	FALSE	canonical	3	394	junction_8	31.6146228033801	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAGTGCCCAGTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	126975847	126945748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.23	chr2	-	2651	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	112.240165142788	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGAGTGCCCAGTAAA	NA	False	NA	-7	True	AATAAA	-14	NA	126975857	126945748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966757_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.24	chr2	-	6575	16	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	7	-3	intron_retention	FALSE	canonical	3	394	junction_8	31.7196048735373	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGAGTGCCCAGTAA	NA	False	NA	-8	True	AATAAA	-13	NA	126975810	126945749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.25	chr2	-	2743	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	112.004695897601	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAGTGCCCAGTA	NA	False	NA	-9	True	AATAAA	-12	NA	126975856	126945750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966964_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.26	chr2	-	5258	9	NNC	ENSMUSG00000034906.16	novel	2264	17	NA	NA	-1621	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	155.112056269008	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAGTGCCCAGTA	NA	False	NA	-9	True	AATAAA	-12	NA	126965591	126945750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126947842_126948023_126948457_126949065_126949391_126950404_126950579_126955479_126955591_126958451_126960146_126963044_126963248_126963959_126964052_126965456
ES.19996.27	chr2	-	1904	4	ISM	ENSMUSG00000034906.16	ENSMUST00000152806.8	2024	6	6031	4	6031	-4	intron_retention	FALSE	canonical	3	470	junction_3	9.7410927974683	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAGTGCCCAGTA	NA	False	NA	-9	True	AATAAA	-12	NA	126950559	126945750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273
ES.19996.28	chr2	-	2990	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	13	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	111.833848581641	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTGAGTGCCCAGTA	NA	False	NA	-9	True	AATAAA	-12	NA	126975804	126945750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967816_126967856_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.3	chr2	-	5518	17	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	21	1	intron_retention	FALSE	canonical	3	394	junction_8	31.6741219294237	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975853	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.30	chr2	-	2624	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	111.833848581641	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTCTGAGTGCCCAG	NA	False	NA	-11	True	AATAAA	-10	NA	126975810	126945752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967624_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.31	chr2	-	2645	18	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-21	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.257984434134	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCTGGCAAGTGTCTGA	NA	False	NA	-19	True	AATAAA	-2	NA	126975843	126945760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947752_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.33	chr2	-	2689	19	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	18	-49	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_18	143.959795913672	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTAAGTGTATTTAA	NA	False	NA	-14	True	CATAAA	-14	NA	126975856	126945795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975318_126975398_126975768
ES.19996.34	chr2	-	4151	16	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	1	-49	intron_retention	FALSE	canonical	0	0	junction_5	116.01463509211	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTAAGTGTATTTAA	NA	False	NA	-14	True	CATAAA	-14	NA	126975821	126945795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955089_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126969643_126975768
ES.19996.35	chr2	-	3710	2	FSM	ENSMUSG00000074825.5	ENSMUST00000110386.2	1898	2	-162	-1650	-26	13	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTCACTAACAACACTG	NA	False	NA	2	True	AATAAA	-35	NA	126985388	126980678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_126984135_126985134
ES.19996.4	chr2	-	4738	17	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-24	1	intron_retention	FALSE	non_canonical	0	0	junction_2	152.092989134115	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975846	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126947842_126948023_126948457_126949065_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969617_126975768
ES.19996.6	chr2	-	4225	17	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	18	1	intron_retention	FALSE	canonical	3	394	junction_8	30.6139648485785	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975856	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.7	chr2	-	2571	17	NNC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.816014785755	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975856	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950597_126955479_126955591_126958451_126958575_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19996.8	chr2	-	2940	17	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	-24	1	intron_retention	FALSE	canonical	3	394	junction_9	30.3809150619266	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975846	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969643_126975768
ES.19996.9	chr2	-	3986	16	NIC	ENSMUSG00000034906.16	novel	2695	18	NA	NA	7	1	intron_retention	FALSE	canonical	3	394	junction_7	31.3134688805526	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGTGCCCAGTAAACAG	NA	False	NA	-4	True	AATAAA	-17	NA	126975867	126945745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ES.19997.1	chr2	+	176	1	Intergenic	novelGene_16575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAATTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	126988019	126988195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126988000_126988200
ES.19998.1	chr2	+	212	1	Intergenic	novelGene_16576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTTTAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	126990943	126991155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_126990900_126991200
ES.19999.1	chr2	-	4190	1	Intergenic	novelGene_16577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTAAAGGTTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	127020496	127016306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127016300_127020500
ES.2.1	chr1	-	181	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCATAACAAAATCCTAGCA	NA	False	NA	NA	False	NA	NA	NA	4243853	4243672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4243700_4243900
ES.20.1	chr1	-	177	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4991408	4991231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4991200_4991400
ES.200.1	chr1	-	4414	2	Antisense	novelGene_ENSMUSG00000073725.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	24743057	24733721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_24735719_24740640
ES.2000.1	chr1	-	3684	15	Fusion	ENSMUSG00000039630.11_ENSMUSG00000086350.2	novel	7640	14	NA	NA	10	-1658	multi-exon	FALSE	non_canonical	0	0	junction_1	1651.89265599759	5011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGAGCTGTTGTA	NA	False	NA	NA	False	AAAAAG	-3	NA	178165352	178142550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_178142560_178155862_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.10	chr1	-	6640	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	-27	-1	intron_retention	FALSE	canonical	2	28	junction_2	2357.73876125548	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTGCTTCTCTTGTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	178165320	178148673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.102	chr1	-	3118	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	31	-3468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1651.89265599759	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165262	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164636_178165100
ES.2000.107	chr1	-	3567	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	-3468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165350	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164767_178164870
ES.2000.109	chr1	-	2921	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	-3469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2147.07477346278	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGTTTGGGATTCTC	NA	False	NA	-23	True	AATAAA	-13	NA	178165352	178155865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157428_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163726_178165274
ES.2000.11	chr1	-	4871	17	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	9	-1	intron_retention	TRUE	canonical	2	3	junction_3	2280.99865653046	5011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTGCTTCTCTTGTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	178165284	178148673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178151279_178152807_178152879_178156850_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.115	chr1	-	3581	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	9	4050	9	3473	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTAGCCTGCTGATT	NA	False	NA	31	True	NA	NA	NA	178165353	178155957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.116	chr1	-	2912	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-24	3472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1708.43202966931	4896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCCTTAGCCTGCTGAT	NA	False	NA	30	True	NA	NA	NA	178165317	178155958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163682_178165107
ES.2000.117	chr1	-	3545	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	-125	4220	-125	3303	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAATGGGATCTATAT	NA	False	NA	0	True	ATTAAA	-21	NA	178165487	178156127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.119	chr1	-	5355	12	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	3301	intron_retention	FALSE	canonical	2	3444	junction_4	924.003550850034	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTAATGGGATCTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	178165353	178156129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163724_178164517
ES.2000.12	chr1	-	3976	4	NNC	ENSMUSG00000039630.11	novel	511	6	NA	NA	379	-2	intron_retention	FALSE	canonical	2	3	junction_2	2896.02359566815	5009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTTGCTTCTCTTGTT	NA	False	NA	-3	True	ATTAAA	-20	NA	178157506	178148674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178152879_178156850_178156973_178157432
ES.2000.128	chr1	-	3301	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	6	3301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTAATGGGATCTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	178165287	178156129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164705_178164746
ES.2000.13	chr1	-	8426	15	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_2	2083.59173431508	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178165289	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178152879_178156682_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.131	chr1	-	3397	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	3301	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	1704.50139163418	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTCTAATGGGATCTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	178165348	178156129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161585_178163446_178163521_178163611_178163724_178164517
ES.2000.133	chr1	-	3384	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	3299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1642.36110523843	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTCTAATGGGATCT	NA	False	NA	-4	True	ATTAAA	-17	NA	178165348	178156131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158394_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.134	chr1	-	3390	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	18	3299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1706.97098417882	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTCTAATGGGATCT	NA	False	NA	-4	True	ATTAAA	-17	NA	178165344	178156131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159512_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.135	chr1	-	3390	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	19	3299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1714.22637337418	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTCTAATGGGATCT	NA	False	NA	-4	True	ATTAAA	-17	NA	178165343	178156131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159915_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.137	chr1	-	3358	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165348	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164560
ES.2000.139	chr1	-	3303	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165352	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164619
ES.2000.14	chr1	-	9788	4	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-855	-3	intron_retention	FALSE	canonical	2	3444	junction_2	1312.35013959267	5010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178159041	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178157912_178158156_178158412_178158657_178158827_178158913
ES.2000.140	chr1	-	5283	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-13	3298	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165375	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.146	chr1	-	3393	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	15	3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165347	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164524
ES.2000.147	chr1	-	3344	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-5	3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1693.79759240107	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165298	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161205_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.148	chr1	-	3297	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	28	3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1684.88355434908	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165265	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158177_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.15	chr1	-	4740	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	14	-3	intron_retention	FALSE	canonical	1	3	junction_2	2064.77663094929	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178165348	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.151	chr1	-	2972	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	320	3298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178164973	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164705_178164758
ES.2000.153	chr1	-	3358	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	1	3298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1642.36110523843	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165292	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158644_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.154	chr1	-	3047	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	179	3298	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165114	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164762_178164881
ES.2000.156	chr1	-	2845	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	18	3298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165344	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164642_178165193
ES.2000.16	chr1	-	12753	13	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	10	-3	intron_retention	FALSE	canonical	2	124	junction_1	1713.19127775233	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178165352	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.160	chr1	-	4764	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	412	3298	intron_retention	FALSE	canonical	0	0	junction_7	1765.00745198301	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178164881	178156132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159495_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.162	chr1	-	3394	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	13	3297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1682.20197339378	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTGTCTAATGGGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	178165349	178156133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159036_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.164	chr1	-	3336	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	3296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1690.96761627476	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTTGTCTAATGGGA	NA	False	NA	-7	True	ATTAAA	-14	NA	178165350	178156134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157794_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.165	chr1	-	3314	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	29	3296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2118.0373953647	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTTGTCTAATGGGA	NA	False	NA	-7	True	ATTAAA	-14	NA	178165333	178156134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156227_178156294_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160673_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.168	chr1	-	2648	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2398.34654581988	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165348	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157428_178157505_178157729_178157912_178158156_178158412_178158657_178158828_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163726_178165274
ES.2000.172	chr1	-	3323	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-24	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165317	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164762_178164805
ES.2000.174	chr1	-	3863	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	3295	intron_retention	FALSE	non_canonical	0	0	junction_3	1686.72824327651	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165350	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178157505_178157729_178157912_178158156_178158412_178158654_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.175	chr1	-	3378	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	3295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1706.97098417882	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165353	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159495_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.176	chr1	-	3282	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165353	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164575_178164695
ES.2000.177	chr1	-	1641	1	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	109	3295	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178157776	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156100_178157800
ES.2000.18	chr1	-	4650	16	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_1	2310.94317445401	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178165333	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178149024_178150698_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.180	chr1	-	3335	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165350	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163726_178164584
ES.2000.188	chr1	-	3171	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2110.416823371	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165352	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158157_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164964_178165193
ES.2000.19	chr1	-	11819	10	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	677	-3	intron_retention	FALSE	canonical	2	124	junction_1	1890.50699320527	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178163293	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111
ES.2000.190	chr1	-	3390	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	3295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1684.88355434908	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTTGTCTAATGGG	NA	False	NA	-8	True	ATTAAA	-13	NA	178165350	178156135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158166_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.196	chr1	-	3229	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	39	3294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCCAGTTGTCTAATGG	NA	False	NA	-9	True	ATTAAA	-12	NA	178165254	178156136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164591
ES.2000.198	chr1	-	3390	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	3294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2160.46124540558	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCCAGTTGTCTAATGG	NA	False	NA	-9	True	ATTAAA	-12	NA	178165348	178156136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158658_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160669_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.2	chr1	-	6350	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	9	2	intron_retention	FALSE	canonical	2	42	junction_2	2058.4320464363	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTCTTGTTTTTA	NA	False	NA	1	True	ATTAAA	-24	NA	178165353	178148670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.20	chr1	-	4035	18	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	220	-3	intron_retention	TRUE	canonical	0	0	junction_1	2592.8603982827	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTTGCTTCTCTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	178165073	178148675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150147_178150698_178150761_178151184_178151279_178151530_178151582_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.202	chr1	-	3366	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-32	3280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1684.88355434908	4895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTGTTGTAAATC	NA	False	NA	-23	True	AAGAAA	-24	NA	178165325	178156150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158150_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.204	chr1	-	3212	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	3223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1708.43202966931	4895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGTTCTGCATTTTG	NA	False	NA	-20	True	CATAAA	-5	NA	178165352	178156207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164635
ES.2000.206	chr1	-	4798	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	2835	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTATTAAGCATTTA	NA	False	NA	-1	True	AGTAAA	-19	NA	178165353	178156595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.21	chr1	-	9136	7	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	1033	-4	intron_retention	FALSE	canonical	0	0	junction_4	2794.51312098071	5010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGACTTGCTTCTCTTG	NA	False	NA	-5	True	ATTAAA	-18	NA	178159458	178148676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178157505_178157729_178157912_178158156_178158350_178158657_178158827_178158913_178159043_178159399
ES.2000.213	chr1	-	2937	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	2830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2139.64271474131	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTTTATTAAGC	NA	False	NA	-6	True	AGTAAA	-14	NA	178165350	178156600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158656_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161205_178161443_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.216	chr1	-	5033	12	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	2830	intron_retention	FALSE	canonical	2	3444	junction_3	809.040447864624	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTTTATTAAGC	NA	False	NA	-6	True	AGTAAA	-14	NA	178165348	178156600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.219	chr1	-	2930	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	15	2830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1714.20883816074	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTTTATTAAGC	NA	False	NA	-6	True	AGTAAA	-14	NA	178165347	178156600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160669_178161107_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.222	chr1	-	2420	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-170	2829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1708.43202966931	4868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165532	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178165213
ES.2000.229	chr1	-	2831	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	37	2829	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	1698.9763956275	4868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165256	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163620_178163724_178164517
ES.2000.233	chr1	-	2423	9	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	610	2829	intron_retention	FALSE	canonical	2	3444	junction_3	1040.94637680094	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178161501	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159922_178160561_178160675_178161111_178161212_178161451
ES.2000.237	chr1	-	2867	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	4	2829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1670.8780917928	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165289	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158817_178158909_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.238	chr1	-	5189	12	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	4	2829	intron_retention	FALSE	non_canonical	0	0	junction_2	1795.1885925007	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165289	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178157505_178157729_178157912_178158155_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.242	chr1	-	2770	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	2829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165279	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164789_178164881
ES.2000.245	chr1	-	3075	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	2829	intron_retention	FALSE	non_canonical	0	0	junction_4	1704.8257547816	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178165352	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158656_178158827_178158913_178159043_178159399_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.246	chr1	-	1108	7	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-650	2829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2272.25707661396	4868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTGTCTTTTATTAAG	NA	False	NA	-7	True	AGTAAA	-13	NA	178161141	178156601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178158943_178161111
ES.2000.247	chr1	-	6256	3	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	617	2828	intron_retention	FALSE	canonical	3	5699	junction_2	299	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTGTCTTTTATTAA	NA	False	NA	-8	True	AGTAAA	-12	NA	178163353	178156602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178159043_178159399_178159520_178159657
ES.2000.25	chr1	-	3113	3	NNC	ENSMUSG00000039630.11	novel	2640	2	NA	NA	-536	-14	intron_retention	FALSE	canonical	0	0	junction_1	62	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTCACTGATGACTT	NA	False	NA	-15	True	ATTAAA	-8	NA	178152272	178148686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178148754_178148802_178150761_178151184
ES.2000.251	chr1	-	2774	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	18	2828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1756.48271293325	4868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTGTCTTTTATTAA	NA	False	NA	-8	True	AGTAAA	-12	NA	178165344	178156602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163690_178163724_178164517
ES.2000.252	chr1	-	2287	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	2828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2110.416823371	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTGTCTTTTATTAA	NA	False	NA	-8	True	AGTAAA	-12	NA	178165350	178156602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158155_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164646_178165292
ES.2000.26	chr1	-	5106	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	9	724	intron_retention	FALSE	canonical	2	42	junction_2	2058.4320464363	5003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTTTATAACTACATAA	NA	False	NA	NA	False	TATAAA	-40	NA	178165353	178149914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.264	chr1	-	2964	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	-290	4966	-290	2557	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTCGACTGTTTTCT	NA	False	NA	-3	True	AATAAA	-33	NA	178165652	178156873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.266	chr1	-	2657	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	2555	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_9	1709.360332277	4850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGAAGTCGACTGTTTT	NA	False	NA	-5	True	AATAAA	-31	NA	178165353	178156875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160669_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.268	chr1	-	2646	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	2555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1699.43721627808	4850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGAAGTCGACTGTTTT	NA	False	NA	-5	True	AATAAA	-31	NA	178165350	178156875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163507_178163611_178163724_178164517
ES.2000.27	chr1	-	6318	14	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	563	704	intron_retention	FALSE	canonical	2	42	junction_2	2113.99881320887	5003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGTGTTTATACAAA	NA	False	NA	NA	False	TATAAA	-20	NA	178164730	178149934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.272	chr1	-	2601	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	2551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCACAAGAAGTCGACTG	NA	False	NA	-9	True	AATAAA	-27	NA	178165348	178156879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164817_178164869
ES.2000.275	chr1	-	4510	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	2547	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTTCACAAGAAGTCG	NA	False	NA	-13	True	AATAAA	-23	NA	178165353	178156883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.278	chr1	-	2644	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	2547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1684.88355434908	4850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTTCACAAGAAGTCG	NA	False	NA	-13	True	AATAAA	-23	NA	178165353	178156883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157902_178158157_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.28	chr1	-	3555	16	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	11	704	combination_of_known_junctions	FALSE	canonical	2	28	junction_2	2307.39312837862	5003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGTGTTTATACAAA	NA	False	NA	NA	False	TATAAA	-20	NA	178165351	178149934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.282	chr1	-	2346	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-7	2547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTTCACAAGAAGTCG	NA	False	NA	-13	True	AATAAA	-23	NA	178165300	178156883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164938_178165193
ES.2000.283	chr1	-	2633	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	17	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1642.36110523843	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACCTTCACAAGAAGTC	NA	False	NA	-14	True	AATAAA	-22	NA	178165345	178156884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158394_178158652_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.284	chr1	-	2001	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	512	2546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1708.43202966931	4850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACCTTCACAAGAAGTC	NA	False	NA	-14	True	AATAAA	-22	NA	178164781	178156884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164598
ES.2000.285	chr1	-	2644	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2128.28350983248	4850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCTTCACAAGAAGT	NA	False	NA	-15	True	AATAAA	-21	NA	178165350	178156885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158656_178158827_178158913_178159036_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.287	chr1	-	2595	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	2545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1714.22637337418	4850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCTTCACAAGAAGT	NA	False	NA	-15	True	AATAAA	-21	NA	178165284	178156885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160550_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.289	chr1	-	2968	13	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	14	5118	14	2405	5prime_fragment	FALSE	canonical	2	3444	junction_3	873.751204100267	4842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGGCTTATTGATGT	NA	False	NA	NA	False	AAAACA	-2	NA	178165348	178157025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.29	chr1	-	5275	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	-3897	1262	1339	704	multi-exon	FALSE	canonical	3	124	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGTGTTTATACAAA	NA	False	NA	NA	False	TATAAA	-20	NA	178155633	178149934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178150761_178151184
ES.2000.290	chr1	-	2852	13	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	10	5238	10	2285	5prime_fragment	FALSE	canonical	2	3444	junction_3	873.751204100267	4840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATATGGGTAATTGGT	NA	False	NA	NA	False	CATAAA	-43	NA	178165352	178157145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.291	chr1	-	1603	7	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	11	7784	11	-24	5prime_fragment	FALSE	canonical	3	5182	junction_1	341.485805789282	4673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAGGACCTGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	178165351	178159691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.3	chr1	-	10894	14	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	18	1	intron_retention	FALSE	canonical	2	124	junction_1	1658.54771789791	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGCTTCTCTTGTTTTT	NA	False	NA	0	True	ATTAAA	-23	NA	178165344	178148671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.30	chr1	-	5238	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	11	532	intron_retention	FALSE	canonical	2	28	junction_2	2357.73876125548	5001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTGGCAATTCTTT	NA	False	NA	NA	False	TATAAA	-15	NA	178165351	178150106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.31	chr1	-	4890	16	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	13	459	intron_retention	FALSE	canonical	2	3	junction_2	2029.07102553525	5001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTTGTTGGTCTTC	NA	False	NA	NA	False	TTTAAA	-18	NA	178165280	178150179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178152879_178156850_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.32	chr1	-	3192	16	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	4	403	combination_of_known_junctions	FALSE	canonical	2	28	junction_2	2307.39312837862	4999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTATGGTTGATTTAC	NA	False	NA	NA	False	AATACA	-22	NA	178165289	178150235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.33	chr1	-	5993	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	-5313	1960	-77	6	multi-exon	FALSE	canonical	3	124	junction_1	0	4977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCTAAGACCATAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	178157049	178150632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178150761_178151184
ES.2000.34	chr1	-	2853	16	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	15	6	combination_of_known_junctions	FALSE	canonical	2	28	junction_2	2307.39312837862	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCTAAGACCATAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	178165347	178150632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.35	chr1	-	4710	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	12	5	intron_retention	FALSE	canonical	2	28	junction_2	2357.73876125548	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGGCTAAGACCATAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	178165350	178150633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.36	chr1	-	6469	15	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_2	2083.59173431508	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATATGGCTAAGACCATA	NA	False	NA	NA	False	ATTAAA	-18	NA	178165292	178150635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178152879_178156682_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.37	chr1	-	2936	17	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2280.99865653046	4996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATGGCTAAGACCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	178165312	178150636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178151279_178152807_178152879_178156850_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.39	chr1	-	4384	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	9	2	intron_retention	FALSE	canonical	2	42	junction_2	2058.4320464363	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATGGCTAAGACCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	178165353	178150636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.4	chr1	-	6222	3	ISM	ENSMUSG00000039630.11	ENSMUST00000188044.7	511	6	1340	-2027	126	1	3prime_fragment	TRUE	canonical	3	28	junction_2	48	4593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGCTTCTCTTGTTTTT	NA	False	NA	0	True	ATTAAA	-23	NA	178156846	178148671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178150761_178151184_178151279_178152807
ES.2000.40	chr1	-	2951	17	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2477.87245481759	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATGGCTAAGACCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	178165350	178150636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178151279_178151530_178151630_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.41	chr1	-	2783	15	NNC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2327.06822755894	4996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATGGCTAAGACCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	178165351	178150636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178150761_178151184_178151279_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158828_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.42	chr1	-	5397	3	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7500	-127	23	127	3prime_fragment	FALSE	canonical	3	6129	junction_2	38.5	4979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGAAAATTTGTTTA	NA	False	NA	NA	False	TTTAAA	-16	NA	178157862	178151780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178156973_178157432_178157505_178157729
ES.2000.43	chr1	-	7637	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	9	-6	9	6	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGTAGTACCAGTATT	NA	False	NA	NA	False	ATTAAA	-20	NA	178165353	178151901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.44	chr1	-	3538	14	ISM	ENSMUSG00000039630.11	ENSMUST00000161769.8	2844	17	-57	1265	12	4	5prime_fragment	FALSE	canonical	2	42	junction_1	1677.42903799678	4975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTGTAGTACCAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	178165350	178151903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.47	chr1	-	7018	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	14	608	14	-119	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATGCTGAAGTTAATG	NA	False	NA	NA	False	AATAAA	-16	NA	178165348	178152515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.48	chr1	-	2929	14	ISM	ENSMUSG00000039630.11	ENSMUST00000161769.8	2844	17	-60	1877	9	-119	5prime_fragment	FALSE	canonical	2	42	junction_1	1677.42903799678	4963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATGCTGAAGTTAATG	NA	False	NA	NA	False	AATAAA	-16	NA	178165353	178152515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.49	chr1	-	6642	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	9	989	9	-500	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCCTTTTTCTTAGTC	NA	False	NA	-2	True	AATAAA	-22	NA	178165353	178152896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.51	chr1	-	6621	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	18	-506	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_9	1709.360332277	4954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTCATCTCCTTTTTC	NA	False	NA	-8	True	AATAAA	-16	NA	178165344	178152902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160669_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.52	chr1	-	5625	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	2003	12	-1514	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTAGTTGACCGATA	NA	False	NA	NA	False	NA	NA	NA	178165350	178153910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.53	chr1	-	7389	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	-1603	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTTACAGGGTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	178165348	178153999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.54	chr1	-	5372	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	29	2239	29	-1750	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGATAGTTTTGTGG	NA	False	NA	NA	False	ATTAAA	-29	NA	178165333	178154146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.55	chr1	-	5269	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	-13	2384	-13	-1895	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCTTTCATTCTTAA	NA	False	NA	NA	False	ATTAAA	-29	NA	178165375	178154291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.56	chr1	-	7092	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	-1902	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTACACTCCAGCTTTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	178165350	178154298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.57	chr1	-	5209	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	14	-1903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1756.48271293325	4922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTACACTCCAGCTTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	178165348	178154299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161641_178163611_178163724_178164517
ES.2000.6	chr1	-	8203	14	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	9	0	intron_retention	FALSE	canonical	2	42	junction_2	2113.99881320887	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGCTTCTCTTGTTTT	NA	False	NA	-1	True	ATTAAA	-22	NA	178165353	178148672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.61	chr1	-	5143	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	13	-1905	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1651.89265599759	4922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAACTACACTCCAGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	178165349	178154301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178165169_178165258
ES.2000.62	chr1	-	5147	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	20	-1906	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	1698.9763956275	4922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAACTACACTCCAGCT	NA	False	NA	NA	False	ATTAAA	-18	NA	178165273	178154302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163620_178163724_178164517
ES.2000.63	chr1	-	5017	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	20	-1907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1684.88355434908	4922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATAACTACACTCCAGC	NA	False	NA	NA	False	ATTAAA	-17	NA	178165273	178154303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157795_178158177_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.64	chr1	-	4390	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	106	3144	37	-2655	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGTGGTTATCCTAAT	NA	False	NA	NA	False	NA	NA	NA	178165256	178155051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.65	chr1	-	4339	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	12	3289	12	-2800	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTGCAATCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	178165350	178155196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.66	chr1	-	4009	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	10	3621	10	-3132	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTAGAAGCCATCATG	NA	False	NA	NA	False	AATACA	-19	NA	178165352	178155528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.67	chr1	-	3874	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	10	3756	10	-3267	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTTTTAACATTTATG	NA	False	NA	NA	False	TATAAA	-30	NA	178165352	178155663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.7	chr1	-	4815	16	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	12	-1	intron_retention	FALSE	canonical	2	28	junction_2	2307.39312837862	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTGCTTCTCTTGTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	178165350	178148673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178151279_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.70	chr1	-	4929	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-588	-3273	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAGACTGCTTTTAACA	NA	False	NA	NA	False	TATAAA	-24	NA	178164558	178155669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.73	chr1	-	3757	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	-18	3901	-18	-3412	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAGAAACTTTAAGTG	NA	False	NA	34	True	NA	NA	NA	178165380	178155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.76	chr1	-	2581	11	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	603	-3457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2364.57162293723	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCTCGCCATCAAGGTC	NA	False	NA	-11	True	AATAAA	-25	NA	178161508	178155853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158152_178158412_178158657_178158827_178158913_178159036_178159395_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451
ES.2000.8	chr1	-	10377	15	NIC	ENSMUSG00000039630.11	novel	2844	17	NA	NA	4	-1	intron_retention	FALSE	canonical	2	124	junction_1	1624.35462851671	5011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTGCTTCTCTTGTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	178165289	178148673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178150761_178151184_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.80	chr1	-	5691	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	-152	-3467	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165514	178155863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.85	chr1	-	3306	15	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	9	-3467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1651.89265599759	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165353	178155863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517_178164808_178165176
ES.2000.87	chr1	-	3650	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	15	-3468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1687.12771918086	4896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165347	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156955_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ES.2000.88	chr1	-	3573	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	-3468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1708.43202966931	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165352	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163726_178164619
ES.2000.90	chr1	-	5464	13	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	12	-3468	intron_retention	FALSE	canonical	0	0	junction_4	1702.72959579285	4896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165350	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158350_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
ES.2000.96	chr1	-	6456	10	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	10	-3468	intron_retention	FALSE	canonical	3	5182	junction_6	374.572678338964	4896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGGGATTCTCG	NA	False	NA	-22	True	AATAAA	-14	NA	178165352	178155864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_178156973_178157432_178157505_178157729_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178161212_178161451_178163521_178163611_178163724_178164517
ES.20000.1	chr2	-	322	2	FSM	ENSMUSG00000044145.3	ENSMUST00000150956.2	2364	2	-3	2045	-3	-2045	multi-exon	FALSE	canonical	3	36	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTAGATCTTCTCTCG	NA	False	NA	-1	True	ATTAAA	-16	NA	127050177	127046531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127046771_127050094
ES.20000.2	chr2	-	136	1	Intergenic	novelGene_16578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	127049970	127049834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127049800_127050000
ES.20001.1	chr2	+	6837	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-81	-11	-68	11	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATACTAAATTTTCTT	NA	False	NA	26	True	AATAAA	-28	NA	127050237	127082382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.11	chr2	+	6166	41	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	149.185184837503	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAACTATATGTCCTT	NA	False	NA	4	True	AATAAA	-6	NA	127050307	127082360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.12	chr2	+	5502	37	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	191.823792278097	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127050307	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059329_127059486_127059792_127059931_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.13	chr2	+	6738	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	145.43793939298	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAACTATATGTCCTT	NA	False	NA	4	True	AATAAA	-6	NA	127050307	127082360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066644_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.14	chr2	+	7749	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-10	-994	3	994	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATTCTAATTTTGTCT	NA	False	NA	10	True	ATTAAA	-22	NA	127050308	127083365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.17	chr2	+	7013	44	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	6	-9	intron_retention	FALSE	non_canonical	0	0	junction_41	145.543876583031	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127050311	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080655_127080741_127081798_127081892_127081988
ES.20001.18	chr2	+	7575	44	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-6	557	intron_retention	FALSE	canonical	3	516	junction_16	103.133737809345	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAACTTCAT	NA	False	NA	NA	False	NA	NA	NA	127050312	127082928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.21	chr2	+	6668	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	145.432020628082	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATGTCCTTAACAGTG	NA	False	NA	11	True	AATAAA	-13	NA	127050312	127082367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074475_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.22	chr2	+	6740	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.239457448725	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127050312	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051062_127052619_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.26	chr2	+	6744	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-6	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	145.122139709571	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATACTAAATTTTCTT	NA	False	NA	26	True	AATAAA	-28	NA	127050312	127082382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061102_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.33	chr2	+	6836	44	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	1	-1	intron_retention	FALSE	canonical	3	516	junction_16	103.184445270634	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127050319	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.35	chr2	+	6749	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	145.122139709571	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCTTAACAGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	127050319	127082369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063657_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.4	chr2	+	7379	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-16	-618	-3	618	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTACAGTGTTATAATCA	NA	False	NA	NA	False	NA	NA	NA	127050302	127082989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.40	chr2	+	6729	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	143.680495234196	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCTTAACAGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	127050324	127082369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059225_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.44	chr2	+	6566	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	8	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	145.432020628082	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTGATACTAAATTTTC	NA	False	NA	24	True	AATAAA	-26	NA	127050326	127082380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074374_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.48	chr2	+	914	4	ISM	ENSMUSG00000003660.11	ENSMUST00000142327.2	2923	15	24	10669	11	-10669	5prime_fragment	FALSE	canonical	3	611	junction_1	9.20144916122817	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGGTTGTGAGCCTTA	NA	False	NA	NA	False	NA	NA	NA	127050329	127053968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519
ES.20001.51	chr2	+	6915	44	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	17	-3	intron_retention	FALSE	canonical	3	516	junction_16	103.193250478383	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127050335	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.52	chr2	+	6719	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	145.247357766042	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127050335	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058368_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.57	chr2	+	7604	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	47	987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	145.239457448725	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCAGAAATTCTAAT	NA	False	NA	3	True	ATTAAA	-15	NA	127050365	127083358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071476_127071837_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.60	chr2	+	6604	44	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	574	2	574	-2	3prime_fragment	FALSE	canonical	3	516	junction_15	102.378987120336	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCTTAACAGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	127050892	127082369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.61	chr2	+	6502	44	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	674	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_43	138.747694254347	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCCTTAACAGTGAT	NA	False	NA	13	True	AATAAA	-15	NA	127050992	127082369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081896_127081994
ES.20001.63	chr2	+	6416	43	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	2299	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.906568448845	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127052617	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127052786_127053526_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063669_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.64	chr2	+	6272	42	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	3197	1	3197	-1	3prime_fragment	FALSE	canonical	3	516	junction_13	103.752542739567	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127053515	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.66	chr2	+	6638	40	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	3304	-9	intron_retention	FALSE	canonical	3	516	junction_13	104.640331364443	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127053622	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.67	chr2	+	6086	41	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	3949	-9	3949	9	3prime_fragment	FALSE	canonical	3	516	junction_12	104.146723424215	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTGATACTAAATTTTC	NA	False	NA	24	True	AATAAA	-26	NA	127054267	127082380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.68	chr2	+	208	1	Intergenic	novelGene_16579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	127054884	127055092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127054900_127055100
ES.20001.69	chr2	+	303	1	Intergenic	novelGene_16580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATAGTATAGTAATTCA	NA	False	NA	NA	False	GATAAA	-40	NA	127054916	127055219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127054900_127055200
ES.20001.70	chr2	+	6019	40	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	6406	3	6406	-3	3prime_fragment	FALSE	canonical	3	516	junction_11	105.168810169549	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127056724	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.71	chr2	+	5074	35	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	6469	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	158.179962444777	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127056787	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059199_127064065_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.72	chr2	+	8362	36	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-5519	-10	intron_retention	FALSE	canonical	3	516	junction_10	109.364419838129	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAACTATATGTCCTTA	NA	False	NA	5	True	AATAAA	-7	NA	127058095	127082361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127073768_127074325_127075013_127075099_127075279_127075419_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.73	chr2	+	5767	38	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	7953	3	-5343	-3	3prime_fragment	FALSE	canonical	3	516	junction_9	103.41688383757	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127058271	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.75	chr2	+	5277	35	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	-4449	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	158.784169959596	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127059165	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.77	chr2	+	4359	28	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	16682	-17	3386	17	3prime_fragment	FALSE	canonical	3	598	junction_7	93.351717766073	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAATTTTCTTTAATCA	NA	False	NA	32	True	AATAAA	-34	NA	127067000	127082388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.78	chr2	+	4164	27	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	3389	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	171.789575597659	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127067003	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.79	chr2	+	4319	28	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	3419	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	168.596001723001	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127067033	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070442_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.8	chr2	+	6853	44	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	-12	1	1	-1	intron_retention	FALSE	canonical	3	516	junction_16	92.575124069799	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127050306	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798
ES.20001.80	chr2	+	4231	27	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	17604	1	4308	-1	3prime_fragment	FALSE	canonical	3	598	junction_6	90.7426949478058	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127067922	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.81	chr2	+	4484	26	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	4363	-9	intron_retention	FALSE	canonical	3	598	junction_5	92.2889029082045	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127067977	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.82	chr2	+	4090	26	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	17894	9	4598	-9	3prime_fragment	FALSE	canonical	3	598	junction_5	91.8477000256403	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127068212	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.84	chr2	+	3907	25	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	18544	3	5248	-3	3prime_fragment	FALSE	canonical	3	598	junction_4	93.4641103876539	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGTCCTTAACAGTGA	NA	False	NA	12	True	AATAAA	-14	NA	127068862	127082368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.85	chr2	+	3654	22	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	6444	-1	intron_retention	FALSE	canonical	3	598	junction_2	95.2058516847118	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTCCTTAACAGTGATA	NA	False	NA	14	True	AATAAA	-16	NA	127070058	127082370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.86	chr2	+	3554	23	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	19740	9	6444	-9	3prime_fragment	FALSE	canonical	3	598	junction_2	95.7713897304884	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	False	NA	6	True	AATAAA	-8	NA	127070058	127082362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.87	chr2	+	10011	16	NIC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	6569	4089	intron_retention	FALSE	canonical	3	598	junction_1	80.1766383264685	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTTTTCATGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	127070183	127086460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127078569_127078659_127078825_127079380_127079503_127079742_127080581_127080658
ES.20001.88	chr2	+	3998	18	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	21733	-985	-6677	985	3prime_fragment	FALSE	canonical	3	671	junction_4	83.7439250495161	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTTTCAGAAATTCTA	1374	False	NA	1	True	ATTAAA	-13	NA	127072051	127083356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.90	chr2	+	5878	12	ISM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	25199	-4089	-3211	4089	3prime_fragment	FALSE	canonical	3	706	junction_1	73.5705654400831	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTTTTCATGGTTTG	4840	False	NA	NA	False	AATAAA	-16	NA	127075517	127086460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ES.20001.91	chr2	+	1603	1	Genic_Genomic	ENSMUSG00000003660.11	novel	NA	NA	NA	NA	806	49	mono-exon	FALSE	NA	NA	NA	NA	NA	893	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	243	False	NA	64	True	ACTAAA	-26	NA	127080817	127082420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_127080800_127082400
ES.20002.1	chr2	-	2277	1	Antisense	novelGene_ENSMUSG00000003660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTAGGGGCTGCTGAG	NA	False	NA	NA	False	AAAAAG	-4	NA	127064056	127061779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_127061800_127064100
ES.20003.1	chr2	-	3023	1	Antisense	novelGene_ENSMUSG00000003660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATAAGGGAATG	NA	False	NA	NA	False	NA	NA	NA	127082034	127079011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_127079000_127082000
ES.20003.10	chr2	-	2679	4	NIC	ENSMUSG00000003662.11	novel	3075	7	NA	NA	96	72	intron_retention	FALSE	canonical	3	197	junction_1	13.0724477007517	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTGTGATCTTTAT	NA	False	NA	-12	True	AATATA	-30	NA	127089640	127084467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127084958_127086832_127088634_127088929_127089079_127089401
ES.20003.11	chr2	-	1869	6	NIC	ENSMUSG00000003662.11	novel	3075	7	NA	NA	74	62	intron_retention	FALSE	canonical	3	164	junction_2	21.6055548412902	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGCTTTTGAAATTG	NA	False	NA	-22	True	AATATA	-20	NA	127089662	127084477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127084958_127086832_127086921_127087642_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.12	chr2	-	4481	4	NIC	ENSMUSG00000003662.11	novel	531	5	NA	NA	59	62	intron_retention	FALSE	canonical	3	208	junction_1	9.10433352249844	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGCTTTTGAAATTG	NA	False	NA	-22	True	AATATA	-20	NA	127089677	127084477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.13	chr2	-	1370	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	34	1671	34	11	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGTGTTACATTTTGG	NA	False	NA	-2	True	ATTAAA	-17	NA	127089702	127084528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.2	chr2	-	4960	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	100	-1985	-96	1985	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTTATGAATTCACT	NA	False	NA	NA	False	AATAAA	-31	NA	127089636	127080872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.3	chr2	-	4162	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	87	-1174	87	1174	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTTGAAGAGGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	127089649	127081683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.4	chr2	-	3453	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	97	-475	97	475	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGGACATATAGTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	127089639	127082382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.5	chr2	-	3157	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	8	-90	8	90	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTTGTTCATGGTGT	NA	False	NA	NA	False	AATGAA	-16	NA	127089728	127082767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.6	chr2	-	3005	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	6	64	6	-64	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTAATTTTTAATGTA	NA	False	NA	NA	False	NA	NA	NA	127089730	127082921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.7	chr2	-	2616	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	65	394	65	-394	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTTTGTGACTCTA	NA	False	NA	NA	False	NA	NA	NA	127089671	127083251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.8	chr2	-	1543	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	-38	1570	-38	112	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCCTGTTTTATAAGT	NA	False	NA	-20	True	NA	NA	NA	127089774	127084427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ES.20003.9	chr2	-	1439	7	NNC	ENSMUSG00000003662.11	novel	3075	7	NA	NA	59	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.6789845177065	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCCTGTTTTATAAGT	NA	False	NA	-20	True	NA	NA	NA	127089677	127084427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089072_127089401
ES.20004.1	chr2	+	4499	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	-31	343	-31	-343	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2303	False	NA	12	True	AATAAA	-25	NA	127089796	127102684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
ES.20004.10	chr2	+	3378	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	86	1347	21	-1347	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATGGGTGATACCTTGA	2420	False	NA	NA	False	AATAAA	-36	NA	127089913	127101680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
ES.20004.11	chr2	+	181	1	Intergenic	novelGene_16581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACCAAGA	4370	False	NA	NA	False	NA	NA	NA	127091863	127092044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127091900_127092000
ES.20004.12	chr2	+	7999	2	ISM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	4066	348	4001	-348	3prime_fragment	FALSE	canonical	3	142	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCTGTAGTCTTCCT	6400	False	NA	7	True	AATAAA	-20	NA	127093893	127102679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127098090_127098876
ES.20004.13	chr2	+	5373	1	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	7414	-348	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCTGTAGTCTTCCT	9813	False	NA	7	True	AATAAA	-20	NA	127097306	127102679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127097300_127102700
ES.20004.2	chr2	+	4895	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	-20	-343	intron_retention	FALSE	canonical	3	85	junction_1	28.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTAGTCTTCCTGTGCC	2314	False	NA	12	True	AATAAA	-25	NA	127089807	127102684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127090730_127097924_127098090_127098876
ES.20004.3	chr2	+	4794	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	18	-1	18	1	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCCGGTCTACTCTT	2352	False	NA	11	True	AATAAA	-16	NA	127089845	127103028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
ES.20004.4	chr2	+	5193	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	24	-1	intron_retention	FALSE	canonical	3	85	junction_1	28.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTTCCGGTCTACTC	2358	False	NA	9	True	AATAAA	-14	NA	127089851	127103026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127090730_127097924_127098090_127098876
ES.20004.5	chr2	+	1564	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	24	-44	intron_retention	FALSE	canonical	3	85	junction_1	28.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTACCCTCTGCTCCT	2358	False	NA	NA	False	NA	NA	NA	127089851	127099397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127090730_127097924_127098090_127098876
ES.20004.6	chr2	+	4415	4	NNC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	25	-345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.5621521658443	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTAGTCTTCCTGTG	2359	False	NA	10	True	AATAAA	-23	NA	127089852	127102682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127090005_127090411_127090730_127097924_127098064_127098876
ES.20004.7	chr2	+	4106	3	FSM	ENSMUSG00000034850.16	ENSMUST00000174288.2	842	3	-22	-3242	-18	-344	multi-exon	FALSE	canonical	2	7	junction_1	67.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTAGTCTTCCTGTGC	2377	False	NA	11	True	AATAAA	-24	NA	127089870	127102683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127090005_127097924_127098090_127098876
ES.20004.8	chr2	+	3431	3	NIC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	2	-1720	intron_retention	FALSE	canonical	3	85	junction_1	28.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTGCCTGTCATTTCT	2401	False	NA	NA	False	ATTAAA	-45	NA	127089894	127101307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127090730_127097924_127098090_127098876
ES.20004.9	chr2	+	4126	4	NNC	ENSMUSG00000034850.16	novel	4811	4	NA	NA	4	-350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.3457129720961	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATAGCCTGTAGTCTTC	2403	False	NA	5	True	AATAAA	-18	NA	127089896	127102677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127090005_127090677_127090730_127097924_127098090_127098876
ES.20005.1	chr2	-	3171	1	FSM	ENSMUSG00000103957.2	ENSMUST00000194123.2	606	1	269	-2834	247	2834	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATCAAAGAATCCAATGA	NA	False	NA	NA	False	NA	NA	NA	127111705	127108534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127108500_127111700
ES.20006.1	chr2	+	3173	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	-23	-34	-12	34	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGCTCCTTGTCATC	NA	False	NA	43	True	CATAAA	-42	NA	127112125	127140886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.10	chr2	+	4391	3	FSM	ENSMUSG00000027367.17	ENSMUST00000110374.2	1530	3	-494	-2367	11	2367	multi-exon	FALSE	canonical	3	327	junction_2	18	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	127112159	127129992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127112801_127126014_127126224_127126451
ES.20006.11	chr2	+	1115	4	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	16	574	intron_retention	FALSE	canonical	0	0	junction_3	163.297274931335	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	127112164	127128199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112801_127126014_127126224_127126451_127126502_127127979
ES.20006.12	chr2	+	3175	7	NIC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	16	0	intron_retention	FALSE	canonical	3	326	junction_4	29.4938788376315	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112164	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.13	chr2	+	3170	9	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_3	156.583643781846	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112165	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112801_127126014_127126224_127126451_127126502_127131877_127131949_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.15	chr2	+	2008	3	FSM	ENSMUSG00000027367.17	ENSMUST00000110374.2	1530	3	-474	-4	31	4	multi-exon	FALSE	canonical	3	327	junction_2	18	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATGTTTACTATCCAT	NA	False	NA	NA	False	NA	NA	NA	127112179	127127629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127112801_127126014_127126224_127126451
ES.20006.16	chr2	+	2331	1	Intergenic	novelGene_16583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTAGAAGTTACTCT	NA	False	NA	NA	False	AATAAA	-18	NA	127117094	127119425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127117100_127119400
ES.20006.17	chr2	+	3039	1	NIC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	3783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	2730	False	NA	9	True	AATAAA	-16	NA	127137813	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127137800_127140900
ES.20006.2	chr2	+	4655	2	ISM	ENSMUSG00000027367.17	ENSMUST00000110374.2	1530	3	-521	-2376	-5	2376	intron_retention	FALSE	canonical	3	363	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTGAAAAAAAGTACAGA	NA	False	NA	NA	False	NA	NA	NA	127112132	127130001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127112801_127126014
ES.20006.3	chr2	+	3353	7	FSM	ENSMUSG00000027367.17	ENSMUST00000125049.2	2869	7	-484	0	2	0	multi-exon	FALSE	canonical	3	326	junction_4	25.3026129524645	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112139	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127112801_127126014_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.4	chr2	+	3099	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	166.956672859293	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAGAAGAGTGTTCATT	NA	False	NA	6	True	AATAAA	-13	NA	127112143	127140849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112797_127126014_127126224_127126451_127126502_127132691_127132788_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.5	chr2	+	3073	7	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	137.491110823775	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112144	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112801_127126014_127126224_127132688_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.7	chr2	+	3207	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	129.050852182307	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112148	127140852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112801_127126014_127126224_127126360_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20006.8	chr2	+	2258	2	ISM	ENSMUSG00000027367.17	ENSMUST00000110374.2	1530	3	-500	0	5	0	intron_retention	FALSE	canonical	3	363	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCACATGTTTACTAT	NA	False	NA	NA	False	NA	NA	NA	127112153	127127625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127112801_127126014
ES.20006.9	chr2	+	3140	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_2	131.116088148742	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTGTTCATTTCTGG	NA	False	NA	11	True	AATAAA	-18	NA	127112153	127140854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127112801_127126014_127126224_127126424_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ES.20007.1	chr2	-	244	1	Intergenic	novelGene_16582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAGACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	127114185	127113941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127113900_127114200
ES.20008.1	chr2	+	172	1	Intergenic	novelGene_16584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTAGCCGAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	127155241	127155413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127155200_127155400
ES.20009.1	chr2	+	1533	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	71	13	71	-13	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGCAGTACCACAT	NA	False	NA	NA	False	AATAAA	-16	NA	127178149	127180283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
ES.2001.1	chr1	+	339	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	178198782	178199121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178198800_178199100
ES.20010.1	chr2	+	4011	1	FSM	ENSMUSG00000058620.6	ENSMUST00000104934.2	4014	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAGTCCCGTGTCTAA	NA	False	NA	NA	False	AATAAA	-19	NA	127205128	127209139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127205100_127209100
ES.20011.1	chr2	+	3895	21	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-55554	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	87.9363974699896	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	740	False	NA	12	True	AATAAA	-23	NA	127211564	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127211807_127247746_127247925_127248643_127248852_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.10	chr2	+	5680	16	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	16	junction_1	67.5019012077932	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4969	False	NA	12	True	AATAAA	-23	NA	127267086	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.11	chr2	+	4963	19	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	0	intron_retention	FALSE	canonical	3	16	junction_1	53.2354715589029	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4969	False	NA	14	True	AATAAA	-25	NA	127267086	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.12	chr2	+	5052	18	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	16	junction_1	63.4454237853918	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4969	False	NA	11	True	AATAAA	-22	NA	127267086	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.13	chr2	+	2652	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	74.736453053152	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4969	False	NA	12	True	AATAAA	-23	NA	127267086	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272783_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.14	chr2	+	4899	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	-2	intron_retention	FALSE	canonical	2	10	junction_1	54.4747364709573	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4969	False	NA	12	True	AATAAA	-23	NA	127267086	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.16	chr2	+	2664	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	-31	-5	-31	5	multi-exon	FALSE	canonical	3	16	junction_1	53.4925768898164	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACATGTCCAATATCTG	4970	False	NA	19	True	AATAAA	-30	NA	127267087	127278017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.17	chr2	+	2903	21	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	16	junction_1	54.1943493364391	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4970	False	NA	12	True	AATAAA	-23	NA	127267087	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.19	chr2	+	6323	12	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	16	junction_1	65.9179304417168	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4970	False	NA	11	True	AATAAA	-22	NA	127267087	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127275011_127275505_127275577_127275651_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.2	chr2	+	4921	25	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-55529	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	98.1174094728691	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	765	False	NA	12	True	AATAAA	-23	NA	127211589	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127211807_127247746_127247925_127248643_127248852_127265113_127265298_127265448_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.21	chr2	+	5407	17	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	44	junction_1	48.9221320058723	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4970	False	NA	11	True	AATAAA	-22	NA	127267087	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270710_127270916_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.23	chr2	+	4939	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-25	-2	intron_retention	FALSE	canonical	3	44	junction_1	57.5912855633516	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4976	False	NA	12	True	AATAAA	-23	NA	127267093	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.24	chr2	+	2671	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-22	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	79.0142499849253	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4979	False	NA	12	True	AATAAA	-23	NA	127267096	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273172_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276140_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.25	chr2	+	2748	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-22	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.0159115426018	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	4979	False	NA	NA	False	ACTAAA	-15	NA	127267096	127278130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272778_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276730_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.26	chr2	+	5022	18	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	16	junction_1	54.7667592968165	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4982	False	NA	11	True	AATAAA	-22	NA	127267099	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.27	chr2	+	4699	20	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	16	junction_1	52.7136202681324	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4985	False	NA	12	True	AATAAA	-23	NA	127267102	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.28	chr2	+	2580	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.5121842462079	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4985	False	NA	12	True	AATAAA	-23	NA	127267102	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.29	chr2	+	4789	20	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_6	70.3938268509801	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4985	False	NA	14	True	AATAAA	-25	NA	127267102	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273337_127273494_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.3	chr2	+	5463	17	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-44	-2	intron_retention	FALSE	canonical	0	0	junction_4	89.5997828889669	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4957	False	NA	12	True	AATAAA	-23	NA	127267074	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270338_127270604_127270710_127270916_127274415_127274569_127274653_127274891_127275011_127275509_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.31	chr2	+	2847	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	117	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	74.0419076039553	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGCAACTCTGAGAGA	4985	False	NA	NA	False	ACTAAA	-14	NA	127267102	127278129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272685_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.32	chr2	+	2706	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-16	121	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	61.9564253282562	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCAACTCTGAGAGAAAAT	4985	False	NA	NA	False	ACTAAA	-18	NA	127267102	127278133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.33	chr2	+	2669	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-15	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	69.2270247257597	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCAATATCTGCTCCCT	4986	False	NA	25	True	AATAAA	-36	NA	127267103	127278023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273172_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.34	chr2	+	4915	19	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	16	junction_1	56.8854165606964	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTCTGAAGTACATGTC	4986	False	NA	10	True	AATAAA	-21	NA	127267103	127278008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273683_127273777_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.36	chr2	+	4367	21	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-14	-4	intron_retention	FALSE	canonical	3	16	junction_1	54.6244221937404	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTCTGAAGTACATGTC	4987	False	NA	10	True	AATAAA	-21	NA	127267104	127278008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.37	chr2	+	4617	20	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	16	junction_1	55.3682209321979	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4987	False	NA	14	True	AATAAA	-25	NA	127267104	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.38	chr2	+	5083	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	2	junction_14	77.8354746315015	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4989	False	NA	12	True	AATAAA	-23	NA	127267106	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276566_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.39	chr2	+	5605	17	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	16	junction_1	56.0435098829472	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4991	False	NA	12	True	AATAAA	-23	NA	127267108	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270710_127270916_127273683_127273777_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.4	chr2	+	2661	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	57.181931085181	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4957	False	NA	12	True	AATAAA	-23	NA	127267074	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.40	chr2	+	3197	20	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	44	junction_1	46.7313889658914	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4992	False	NA	12	True	AATAAA	-23	NA	127267109	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.41	chr2	+	5423	17	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_4	81.5636254711621	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4992	False	NA	14	True	AATAAA	-25	NA	127267109	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270338_127270604_127270710_127270916_127273683_127273777_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.43	chr2	+	4645	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-8	-2	intron_retention	FALSE	canonical	2	10	junction_1	65.9064057659622	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4993	False	NA	12	True	AATAAA	-23	NA	127267110	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273199_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.44	chr2	+	6343	12	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	16	junction_1	77.3811004751406	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4993	False	NA	11	True	AATAAA	-22	NA	127267110	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270710_127270916_127274415_127274569_127274653_127274894_127275011_127275505_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.45	chr2	+	5176	18	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_4	80.5204094138867	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4993	False	NA	12	True	AATAAA	-23	NA	127267110	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270243_127270604_127270710_127270916_127273683_127273777_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.47	chr2	+	4977	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_10	73.1780342135399	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4993	False	NA	12	True	AATAAA	-23	NA	127267110	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275403_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.48	chr2	+	2624	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	73.9364500057704	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	4993	False	NA	12	True	AATAAA	-23	NA	127267110	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276718_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.49	chr2	+	4348	21	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	44	junction_1	49.8666973039122	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4995	False	NA	11	True	AATAAA	-22	NA	127267112	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.51	chr2	+	2384	20	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	66.195546795177	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	4999	False	NA	14	True	AATAAA	-25	NA	127267116	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.52	chr2	+	5084	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	44	junction_1	51.7378243564203	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5000	False	NA	11	True	AATAAA	-22	NA	127267117	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.53	chr2	+	5992	15	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	44	junction_1	53.1741939098204	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5000	False	NA	11	True	AATAAA	-22	NA	127267117	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270710_127270916_127273683_127273777_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.54	chr2	+	2612	21	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.7085030787494	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5000	False	NA	12	True	AATAAA	-23	NA	127267117	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127273202_127273337_127273494_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.55	chr2	+	3295	19	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	16	junction_1	52.7687711613274	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5000	False	NA	11	True	AATAAA	-22	NA	127267117	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.56	chr2	+	2619	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	79.0065010672182	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5001	False	NA	12	True	AATAAA	-23	NA	127267118	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273984_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.57	chr2	+	2486	21	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	74.3053665625842	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTCTGAAGTACATGTC	5002	False	NA	10	True	AATAAA	-21	NA	127267119	127278008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.58	chr2	+	2940	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	1	-57	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_13	68.6166848011952	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTTTGCTCATCAT	5002	False	NA	-43	True	NA	NA	NA	127267119	127277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275135_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.59	chr2	+	5422	17	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	82.7296047373611	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5002	False	NA	11	True	AATAAA	-22	NA	127267119	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127274415_127274569_127274653_127274894_127275011_127275403_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.60	chr2	+	4501	20	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	15	-2	intron_retention	FALSE	canonical	1	1	junction_16	65.993536156236	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5016	False	NA	12	True	AATAAA	-23	NA	127267133	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.61	chr2	+	2798	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	85	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.2349702772765	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5086	False	NA	11	True	AATAAA	-22	NA	127267203	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267462_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.62	chr2	+	7227	17	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	86	-2	intron_retention	FALSE	canonical	3	173	junction_4	24.3912606019041	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5087	False	NA	12	True	AATAAA	-23	NA	127267204	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127269292_127269412_127269527_127270165_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.63	chr2	+	2702	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	115	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.2349702772765	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5116	False	NA	11	True	AATAAA	-22	NA	127267233	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267346_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.64	chr2	+	2615	21	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	118	-412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.7789353545838	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGTTTTTCTGCCTTCCT	5119	False	NA	NA	False	AATGAA	-11	NA	127267236	127277600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267345_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394
ES.20011.65	chr2	+	2959	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	119	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.983674953575	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	5120	False	NA	NA	False	ACTAAA	-15	NA	127267237	127278130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267477_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.66	chr2	+	4522	21	ISM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	123	2	123	-2	3prime_fragment	FALSE	canonical	3	126	junction_6	33.3485756817289	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5124	False	NA	12	True	AATAAA	-23	NA	127267241	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.67	chr2	+	2807	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	125	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.0614337467523	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5126	False	NA	11	True	AATAAA	-22	NA	127267243	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267461_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.69	chr2	+	6561	13	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	133	-3	intron_retention	FALSE	canonical	3	126	junction_5	39.9593543491383	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5134	False	NA	11	True	AATAAA	-22	NA	127267251	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127269292_127269412_127269527_127270165_127270710_127270916_127271046_127272774_127272875_127273202_127273683_127273777_127274653_127274891_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.7	chr2	+	2767	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-34	117	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	63.6951711665176	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGCAACTCTGAGAGA	4967	False	NA	NA	False	ACTAAA	-14	NA	127267084	127278129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.70	chr2	+	2759	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	137	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	62.6823326778126	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5138	False	NA	12	True	AATAAA	-23	NA	127267255	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267477_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.71	chr2	+	4334	20	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	137	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	72.6745105765056	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	5138	False	NA	12	True	AATAAA	-23	NA	127267255	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127273235_127273337_127273623_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.73	chr2	+	2904	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	149	118	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.0614337467523	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	5150	False	NA	NA	False	ACTAAA	-15	NA	127267267	127278130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267461_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.74	chr2	+	2925	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	151	125	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.946691425357	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAGAGAAAATTTAT	5152	False	NA	NA	False	ACTAAA	-22	NA	127267269	127278137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267477_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.76	chr2	+	5104	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	153	-9	intron_retention	FALSE	canonical	0	0	junction_1	56.5540547716175	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCTAAGTCTGAAGTAC	5154	False	NA	5	True	AATAAA	-16	NA	127267271	127278003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267477_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.78	chr2	+	2737	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	229	12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	63.1480641392525	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAATATCTGCTCCCTC	5230	False	NA	26	True	AATAAA	-37	NA	127267347	127278024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127267477_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.79	chr2	+	4703	20	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	242	-3	intron_retention	FALSE	canonical	3	126	junction_6	34.1822555253129	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	5243	False	NA	11	True	AATAAA	-22	NA	127267360	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.82	chr2	+	4137	17	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	3482	118	intron_retention	FALSE	canonical	3	48	junction_2	59.7350595860588	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	361	False	NA	NA	False	ACTAAA	-15	NA	127270600	127278130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127270710_127270916_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.83	chr2	+	4482	14	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	3797	-3	intron_retention	FALSE	canonical	3	173	junction_1	26.7453474359085	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	150	False	NA	11	True	AATAAA	-22	NA	127270915	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.85	chr2	+	3581	16	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	4155	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	60.749613624743	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	508	False	NA	12	True	AATAAA	-23	NA	127271273	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127272875_127273172_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.86	chr2	+	3921	15	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	4188	-10	intron_retention	FALSE	canonical	0	0	junction_2	73.9631734068257	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCCTAAGTCTGAAGTA	541	False	NA	4	True	AATAAA	-15	NA	127271306	127278002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127272875_127273202_127273337_127273494_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.87	chr2	+	4224	12	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	4216	-2	intron_retention	FALSE	canonical	3	126	junction_1	40.0586347105844	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	569	False	NA	12	True	AATAAA	-23	NA	127271334	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127272875_127273202_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.88	chr2	+	2690	13	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	5916	-2	intron_retention	FALSE	canonical	3	173	junction_1	27.8028775489157	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	2269	False	NA	12	True	AATAAA	-23	NA	127273034	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.89	chr2	+	4489	3	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	6239	0	intron_retention	FALSE	canonical	3	233	junction_1	14.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	2592	False	NA	14	True	AATAAA	-25	NA	127273357	127278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127276844_127276926_127277048_127277130
ES.20011.9	chr2	+	5721	16	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	16	junction_1	56.9395000563464	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGTACATGTCC	4969	False	NA	11	True	AATAAA	-22	NA	127267086	127278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270710_127270916_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20011.90	chr2	+	2803	5	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	7411	-2	intron_retention	FALSE	canonical	3	233	junction_1	14.396180048888	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAAGTACATGTCCA	3764	False	NA	12	True	AATAAA	-23	NA	127274529	127278010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ES.20012.1	chr2	-	4426	5	NNC	ENSMUSG00000027371.11	novel	370	4	NA	NA	-212	11713	intron_retention	FALSE	non_canonical	0	0	junction_1	44.5533388198909	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAACCTGAGCTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	127280451	127266421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127270272_127276813_127277171_127278465_127278554_127278656_127278766_127280429
ES.20012.10	chr2	-	1445	7	FSM	ENSMUSG00000027371.11	ENSMUST00000146757.8	1462	7	11	6	3	-6	multi-exon	FALSE	canonical	3	84	junction_5	9.94428926011753	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCAGTTTAGCTTCCAC	NA	False	NA	-11	True	AATAAA	-12	NA	127286474	127278141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280490_127282305_127282523_127283793_127284045_127286336
ES.20012.2	chr2	-	1249	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	-34	-4	-19	4	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCACTGTCTTTTAGT	NA	False	NA	0	True	AATAAA	-23	NA	127286504	127278130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ES.20012.3	chr2	-	2730	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_4	10.5754432531218	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286485	127278134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282523_127283793_127284045_127286336
ES.20012.4	chr2	-	1039	7	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	35.4044096437467	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286459	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127278327_127278465_127278554_127278656_127278766_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ES.20012.5	chr2	-	2609	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	3	junction_4	40.7499693251418	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286469	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282419_127283793_127284045_127286336
ES.20012.6	chr2	-	1410	7	NNC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	38.4736562107401	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286473	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280490_127282305_127282483_127283793_127284045_127286336
ES.20012.7	chr2	-	3991	5	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	90	junction_3	8.10478253872366	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286476	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127284045_127286336
ES.20012.8	chr2	-	2777	5	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	3	junction_3	42.6204176422522	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286498	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127278554_127278656_127280490_127282305_127282419_127283793_127284045_127286336
ES.20012.9	chr2	-	6310	4	NNC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1	junction_1	46.1904270986484	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286506	127278135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127278324_127278465_127278554_127278656_127280490_127282305
ES.20013.1	chr2	-	3017	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	-88	-1633	-88	1	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTCTCTCCAGCTTCA	9540	False	NA	2	True	AATAAA	-19	NA	127324507	127298416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
ES.20013.2	chr2	-	908	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	288	100	288	10	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTTTACTTCCAAGACA	9916	False	NA	-1	True	AATATA	-14	NA	127324131	127300149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
ES.20013.4	chr2	-	970	9	FSM	ENSMUSG00000079056.13	ENSMUST00000028850.15	2728	9	6	1752	6	-10	multi-exon	FALSE	canonical	1	1	junction_7	31.0161248385416	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATATTTGCAAAAAGTG	NA	False	NA	-21	True	NA	NA	NA	127363284	127300169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307895_127352748_127352915_127363157
ES.20014.2	chr2	-	4324	24	NNC	ENSMUSG00000027376.16	novel	4796	24	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.714420727180651	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCAGTTCTCTGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	127383405	127368874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127370525_127370665_127370739_127371051_127371159_127371319_127371410_127372039_127372109_127372283_127372365_127372627_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376826_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ES.20015.1	chr2	-	3945	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-6	-958	2	87	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTCTATTTATCTAAG	NA	False	NA	42	True	AATAAA	-10	NA	127426595	127416494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
ES.20015.10	chr2	-	3190	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	2	97	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	12.4963994814506	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTATTTCTTCCTTCTTC	NA	False	NA	78	True	AATATA	-18	NA	127426595	127417355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424102_127426549
ES.20015.11	chr2	-	2876	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	-10	-101	-10	94	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTATTTCTTCCTTC	NA	False	NA	75	True	AATATA	-15	NA	127426607	127417358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
ES.20015.12	chr2	-	5893	4	NNC	ENSMUSG00000034800.16	novel	1284	4	NA	NA	4	23	intron_retention	FALSE	canonical	2	3	junction_2	13.7679176187089	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGGGTCCACCTTCT	NA	False	NA	4	True	NA	NA	NA	127426593	127417429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422797_127422944_127423395
ES.20015.13	chr2	-	5166	5	NIC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	2	0	intron_retention	FALSE	canonical	1	3	junction_4	13.0647426304539	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	-19	True	NA	NA	NA	127426595	127417452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127419865_127420523_127422944_127423395_127423467_127423778_127423996_127426549
ES.20015.14	chr2	-	5541	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-6	0	2	0	intron_retention	FALSE	canonical	3	10	junction_4	9.20597631976098	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	-19	True	NA	NA	NA	127426595	127417452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778
ES.20015.15	chr2	-	5851	4	FSM	ENSMUSG00000034800.16	ENSMUST00000164551.2	1284	4	-3167	-1400	2	-2	multi-exon	FALSE	canonical	3	28	junction_2	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGAAGTGTCTCTATT	NA	False	NA	-21	True	NA	NA	NA	127426595	127417454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395
ES.20015.16	chr2	-	2732	5	NNC	ENSMUSG00000034800.16	novel	2765	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.0078099585228	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGAAGTGTCTCTATT	NA	False	NA	-21	True	NA	NA	NA	127426599	127417454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422816_127422904_127423395_127423467_127426549
ES.20015.17	chr2	-	5880	4	NNC	ENSMUSG00000034800.16	novel	1284	4	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_2	15.1730755689881	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTGAAGTGTCTCTA	NA	False	NA	-23	True	NA	NA	NA	127426596	127417456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420668_127422816_127422944_127423395
ES.20015.18	chr2	-	2983	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-7	5	1	2	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATACTGAAGTGTCTCT	NA	False	NA	-24	True	NA	NA	NA	127426596	127417457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
ES.20015.19	chr2	-	2739	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110366.8	4912	6	2407	878	-10	0	3prime_fragment	FALSE	canonical	0	0	junction_4	13.4536240470737	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATACTGAAGTGTCT	NA	False	NA	-26	True	NA	NA	NA	127426607	127417459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426585
ES.20015.2	chr2	-	3658	5	ISM	ENSMUSG00000034800.16	ENSMUST00000110366.8	4912	6	2411	-45	-6	45	3prime_fragment	FALSE	canonical	0	0	junction_4	13.4536240470737	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACTTCTGAGTCTTT	NA	False	NA	0	True	NA	NA	NA	127426603	127416536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426585
ES.20015.20	chr2	-	8480	2	ISM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	-6	5	-6	-5	intron_retention	FALSE	canonical	3	30	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAATGAATACTGAAG	NA	False	NA	-31	True	NA	NA	NA	127426603	127417464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127419865_127420523
ES.20015.3	chr2	-	4568	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	2	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.3066352200821	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACTTCTGAGTCTTT	NA	False	NA	0	True	NA	NA	NA	127426595	127416536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422797_127422904_127423395_127423467_127423778_127423996_127425863
ES.20015.4	chr2	-	3928	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	-14	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	12.8	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGACTTCTGAGTCT	NA	False	NA	-2	True	NA	NA	NA	127426611	127416538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424007_127426549
ES.20015.5	chr2	-	3685	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	1	-921	1	43	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGACTTCTGAGTCT	NA	False	NA	-2	True	NA	NA	NA	127426596	127416538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
ES.20015.6	chr2	-	1847	3	NNC	ENSMUSG00000034800.16	novel	4912	6	NA	NA	1	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTGACTGTCTCTG	NA	False	NA	-16	True	NA	NA	NA	127426596	127416552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127416621_127416662_127416692_127424846
ES.20015.7	chr2	-	3683	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	-6	-289	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	12.4963994814506	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGAGTCTTCCCTTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	127426603	127416870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424102_127426549
ES.20015.8	chr2	-	3224	6	NNC	ENSMUSG00000034800.16	novel	2981	6	NA	NA	-10	155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.1087756865392	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTGTATGAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	127426607	127417297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127424102_127426585
ES.20015.9	chr2	-	3141	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	-6	-154	2	154	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGTGTATGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	127426595	127417298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
ES.20016.1	chr2	+	1665	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	-25	2841	-25	133	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTATATAGCTGTGTG	3942	False	NA	29	True	AATAAA	-26	NA	127429116	127445908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.11	chr2	+	4209	12	NNC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.21632909336	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCTTCCAATAACTT	4157	False	NA	4	True	AATAAA	-15	NA	127429331	127448746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437739_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.12	chr2	+	4282	11	NNC	ENSMUSG00000027374.13	novel	3228	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	437.32990979351	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCCAATAACTTG	4157	False	NA	5	True	AATAAA	-16	NA	127429331	127448747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127440077_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.13	chr2	+	1370	12	NNC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-5	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	412.298275243294	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	4159	False	NA	24	True	AATAAA	-21	NA	127429333	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444369_127445548
ES.20016.14	chr2	+	5394	11	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	192	2	-5	-2	intron_retention	FALSE	canonical	3	1110	junction_4	150.188181958502	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCCAATAACTTG	4159	False	NA	5	True	AATAAA	-16	NA	127429333	127448747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304
ES.20016.15	chr2	+	1352	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-5	124	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	435.067362600322	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGAGCACATGGTATAT	4159	False	NA	20	True	AATAAA	-17	NA	127429333	127445899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.16	chr2	+	3552	10	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-5	128	intron_retention	FALSE	canonical	3	1110	junction_4	156.90698668044	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	4159	False	NA	24	True	AATAAA	-21	NA	127429333	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304
ES.20016.18	chr2	+	3077	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	193	1211	-4	1096	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCTGCTGCCTGGTACC	4160	False	NA	NA	False	NA	NA	NA	127429334	127447538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.19	chr2	+	6682	9	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-4	125	intron_retention	FALSE	canonical	3	1110	junction_2	168.527260406143	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGCACATGGTATATA	4160	False	NA	21	True	AATAAA	-18	NA	127429334	127445900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127433872_127436363_127436490_127437583_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.2	chr2	+	4537	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	-2	-54	-2	54	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAGGCCTCGTCACTA	3965	False	NA	61	True	AATAAA	-29	NA	127429139	127448803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.20	chr2	+	4060	10	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	461.736443450023	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCTTCCAATAACTT	4160	False	NA	4	True	AATAAA	-15	NA	127429334	127448746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.21	chr2	+	7981	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	193	-3693	-4	3693	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGCTTGCTTCCTCA	4160	False	NA	NA	False	AATAAA	-16	NA	127429334	127452442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.22	chr2	+	1422	12	NNC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	0	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	419.23485991577	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	4164	False	NA	24	True	AATAAA	-21	NA	127429338	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433749_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.23	chr2	+	3380	10	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	0	124	intron_retention	FALSE	canonical	3	1110	junction_4	125.355592979963	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGAGCACATGGTATAT	4164	False	NA	20	True	AATAAA	-17	NA	127429338	127445899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127444442_127445548
ES.20016.25	chr2	+	1403	11	NNC	ENSMUSG00000027374.13	novel	3228	11	NA	NA	8	128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	437.32990979351	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	4172	False	NA	24	True	AATAAA	-21	NA	127429346	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127440097_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.26	chr2	+	4366	13	NNC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	527.808749822214	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCCAATAACTTG	4178	False	NA	5	True	AATAAA	-16	NA	127429352	127448747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437278_127437377_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.27	chr2	+	1319	12	NNC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	38	126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.21632909336	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGCACATGGTATATAG	4202	False	NA	22	True	AATAAA	-19	NA	127429376	127445901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437739_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.28	chr2	+	5848	11	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	77	126	intron_retention	FALSE	canonical	1	13	junction_1	435.477025800443	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGCACATGGTATATAG	4241	False	NA	22	True	AATAAA	-19	NA	127429415	127445901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127432160_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.29	chr2	+	1435	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-1419	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	418.80789102735	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	5767	False	NA	26	True	AATAAA	-23	NA	127430941	127445905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127431004_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.3	chr2	+	2579	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	7	1895	7	412	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTTGTTTGTTTGTTT	3974	False	NA	NA	False	NA	NA	NA	127429148	127446854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.30	chr2	+	4334	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-114	42	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGCCTTGAGAGCAAG	7072	False	NA	49	True	AATAAA	-17	NA	127432246	127448791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.31	chr2	+	1516	12	NIC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-102	130	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	7084	False	NA	26	True	AATAAA	-23	NA	127432258	127445905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.32	chr2	+	7943	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-76	3689	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTTCTTGCTTGCTTC	7110	False	NA	NA	False	AATAAA	-12	NA	127432284	127452438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.33	chr2	+	1406	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-74	128	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	7112	False	NA	24	True	AATAAA	-21	NA	127432286	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.34	chr2	+	4329	12	NIC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-74	-3	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCTTCCAATAACTT	7112	False	NA	4	True	AATAAA	-15	NA	127432286	127448746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.35	chr2	+	4129	10	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	4591	2	1372	-2	3prime_fragment	FALSE	canonical	3	1110	junction_2	161.772130548566	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCCAATAACTTG	8558	False	NA	5	True	AATAAA	-16	NA	127433732	127448747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.37	chr2	+	1467	7	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	9676	2167	1225	140	3prime_fragment	FALSE	canonical	3	1269	junction_2	143.13358174175	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCAATTACACTTCTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	127438817	127446582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.38	chr2	+	687	2	Intergenic	novelGene_16585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCTTGCTTGCTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	127451267	127452440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127451411_127451896
ES.20016.4	chr2	+	2609	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	29	129	intron_retention	FALSE	canonical	3	1110	junction_4	154.460383270274	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	3996	False	NA	25	True	AATAAA	-22	NA	127429170	127445904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.5	chr2	+	3342	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	29	129	intron_retention	FALSE	canonical	3	1110	junction_4	153.534654068715	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACATGGTATATAGCTG	3996	False	NA	25	True	AATAAA	-22	NA	127429170	127445904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.6	chr2	+	4158	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	181	142	-16	-142	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTTCTATTAGCCTAA	4148	False	NA	NA	False	AAAAAG	-17	NA	127429322	127448607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.7	chr2	+	2939	10	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	-8	128	intron_retention	FALSE	canonical	3	1110	junction_4	146.582130519563	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCACATGGTATATAGCT	4156	False	NA	24	True	AATAAA	-21	NA	127429330	127445903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127438855_127440105_127440197_127441931_127441979_127442748_127443361_127444304_127444442_127445548
ES.20016.8	chr2	+	1901	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	189	2391	-8	-84	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTGGGTTATTTGT	4156	False	NA	NA	False	NA	NA	NA	127429330	127446358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ES.20016.9	chr2	+	818	5	FSM	ENSMUSG00000027374.13	ENSMUST00000134101.8	812	5	-7	1	-7	-1	multi-exon	FALSE	canonical	3	1110	junction_4	81.6160982894919	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACTGCATCATAGAAAA	4157	False	NA	NA	False	AATAAA	-14	NA	127429331	127437976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583
ES.20017.1	chr2	-	2741	1	Antisense	novelGene_ENSMUSG00000027374.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAACACAAGCCACAAACA	NA	False	NA	NA	False	NA	NA	NA	127446913	127444172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_127444200_127446900
ES.20017.2	chr2	-	3263	2	Antisense	novelGene_ENSMUSG00000027374.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAACACAAGCCACAAACA	9777	False	NA	NA	False	NA	NA	NA	127448542	127444172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_127444447_127445553
ES.20018.1	chr2	-	2446	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	331	1	-145	-1	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGTCTCACTCTTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	127498284	127475146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
ES.20018.2	chr2	-	4120	1	NIC	ENSMUSG00000027375.15	novel	2778	4	NA	NA	18872	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTGTCTCACTCTTTT	3292	False	NA	-4	True	ATTAAA	-15	NA	127479267	127475147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127475100_127479300
ES.20018.3	chr2	-	854	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	508	1416	32	232	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTCCTAAGAATTTG	NA	False	NA	NA	False	AAGAAA	-24	NA	127498107	127476561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
ES.20018.4	chr2	-	769	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	413	1596	-63	52	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCGCGTCTCTTGGGTGTT	NA	False	NA	0	True	NA	NA	NA	127498202	127476741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
ES.20019.1	chr2	-	2181	5	NNC	ENSMUSG00000027377.3	novel	2006	4	NA	NA	-806	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	23.2849200127464	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	-2	True	AATAAA	-17	NA	127572658	127546309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675_127571900_127572526
ES.20019.2	chr2	-	1932	4	NNC	ENSMUSG00000027377.3	novel	2006	4	NA	NA	15561	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.9404127862612	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTGGAGTCTATCGC	NA	False	NA	-2	True	AATAAA	-17	NA	127556291	127546309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127547844_127550756_127550880_127554188_127554357_127556184
ES.20019.3	chr2	-	1167	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	19	820	19	-820	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGGTTTGGGGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	127571833	127547125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
ES.20019.5	chr2	-	2960	3	NNC	ENSMUSG00000027377.3	novel	2006	4	NA	NA	23	-5207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	127571829	127551512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127553121_127553158_127554357_127571675
ES.2002.1	chr1	-	146	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCCTTTACCTCA	NA	False	NA	NA	False	NA	NA	NA	178206693	178206547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_178206500_178206700
ES.20020.1	chr2	-	2290	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	7	-1	7	-1	multi-exon	TRUE	canonical	3	41	junction_11	13.7437973922422	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTATATCTAAATTT	2798	False	NA	1	True	AATAAA	-17	NA	127630810	127582654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.10	chr2	-	4285	19	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	-16	-26	intron_retention	FALSE	canonical	0	0	junction_14	20.2582097365092	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAATAAAATAAATTTT	2818	False	NA	-26	True	NA	NA	NA	127630790	127582681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614146_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.12	chr2	-	1696	17	ISM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	28	7264	-15	-2378	5prime_fragment	FALSE	canonical	3	41	junction_8	12.1956703382799	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGGGGTCTTTCCT	2819	False	NA	NA	False	NA	NA	NA	127630789	127589919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.4	chr2	-	2084	18	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1860524432484	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTATATCTAAATT	2818	False	NA	0	True	AATAAA	-16	NA	127630790	127582655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127583111_127584991_127585037_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610176_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.6	chr2	-	2472	21	NNC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	24.9649253954423	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTATATCTAAATT	2819	False	NA	0	True	AATAAA	-16	NA	127630789	127582655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127594690_127594892_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.8	chr2	-	5465	17	NIC	ENSMUSG00000027378.17	novel	2296	20	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_3	20.9105236663265	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTGTTATATCTAAAT	2797	False	NA	-1	True	AATAAA	-15	NA	127630811	127582656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127583109_127584991_127585037_127587815_127587890_127595892_127595993_127598011_127598089_127599598_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ES.20020.9	chr2	-	4308	5	ISM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	31258	5	-3526	-1	intron_retention	FALSE	canonical	3	63	junction_4	10.6858551365813	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTGTTATATCTAAAT	NA	False	NA	-1	True	AATAAA	-15	NA	127599516	127582656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892
ES.20021.1	chr2	-	523	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-59	336	-59	-336	multi-exon	FALSE	canonical	3	537	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCAGTATTTTTG	NA	False	NA	11	True	AATAAA	-35	NA	127634467	127633643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127633753_127634053
ES.20022.1	chr2	+	4453	2	Antisense	novelGene_ENSMUSG00000027379.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCACCCCCTTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	127666557	127671227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_127667388_127667604
ES.20022.2	chr2	+	208	1	Intergenic	novelGene_16586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAAAATATAACACTT	NA	False	NA	NA	False	NA	NA	NA	127667396	127667604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127667400_127667600
ES.20023.1	chr2	+	2782	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-86	9	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCGGAAATGAATTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	127680709	127965802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
ES.20023.2	chr2	+	263	1	Intergenic	novelGene_16589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	127781748	127782011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127781700_127782000
ES.20024.1	chr2	-	4351	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	-5	-928	-5	919	multi-exon	TRUE	canonical	0	0	junction_18	145.15221297161	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACTGACATTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	127673790	127642116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.10	chr2	-	6895	15	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-6882	-2	intron_retention	FALSE	canonical	3	436	junction_11	73.1028420118129	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTTGTTCTAAATAC	NA	False	NA	-1	True	AATAAA	-22	NA	127663712	127643037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594
ES.20024.13	chr2	-	8768	22	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	200.725701533799	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	127673778	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127650975_127651217_127651350_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127661285_127663594_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.14	chr2	-	5052	8	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	1994	-3	intron_retention	FALSE	canonical	0	0	junction_4	233.096371416088	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	3016	False	NA	-2	True	AATAAA	-21	NA	127653793	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646478_127646728_127646891_127647199_127647316_127648145_127650975_127652528
ES.20024.15	chr2	-	3390	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	178.998836122846	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	127673796	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.16	chr2	-	5453	23	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	11	-3	intron_retention	FALSE	canonical	3	436	junction_12	67.4500733631492	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	127673768	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.18	chr2	-	5322	24	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	18	-3	intron_retention	FALSE	canonical	0	0	junction_18	181.616330469988	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	127673761	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663780_127663861_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.19	chr2	-	3287	24	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	191.866949410242	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAGTTGTTCTAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	127673780	127643038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.21	chr2	-	6472	23	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	22	4	intron_retention	FALSE	canonical	0	0	junction_16	194.46053796708	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	-4	True	AATAAA	-19	NA	127673757	127643040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.22	chr2	-	6561	24	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-26	4	intron_retention	FALSE	canonical	0	0	junction_16	249.604890044677	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTAGTTGTTCTAAA	NA	False	NA	-4	True	AATAAA	-19	NA	127673750	127643040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594_127663777_127663861_127663915_127665112_127665209_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.24	chr2	-	5158	24	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-7376	3	intron_retention	FALSE	canonical	0	0	junction_17	192.33414527965	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127681161	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127681012
ES.20024.25	chr2	-	5285	20	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	6652	3	intron_retention	FALSE	canonical	0	0	junction_17	203.792586426858	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127667072	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127651218_127652528_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026
ES.20024.26	chr2	-	9757	20	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	11	3	intron_retention	FALSE	canonical	0	0	junction_13	158.960508344986	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673768	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.27	chr2	-	3471	24	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	26	3	intron_retention	FALSE	canonical	3	436	junction_12	73.0457297789638	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673753	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.28	chr2	-	3417	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	188.732279337396	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673790	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667032_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.29	chr2	-	3428	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	186.986737311916	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673780	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658083_127659171_127659399_127661132_127661285_127663594_127663773_127663857_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.3	chr2	-	4052	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	28	-662	22	653	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTGATTCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	127673757	127642382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.31	chr2	-	8785	12	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-7521	3	intron_retention	FALSE	canonical	3	436	junction_8	71.079980559674	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127664351	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646891_127647199_127647316_127648145_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594
ES.20024.34	chr2	-	3443	26	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	216.593096842905	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673756	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127651166_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.35	chr2	-	3657	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	188.348040539316	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673778	127643041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.36	chr2	-	3468	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-7418	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	220.821473738151	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACCTAGTTGTTCTA	NA	False	NA	-6	True	AATAAA	-17	NA	127681203	127643042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661291_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127681012
ES.20024.37	chr2	-	3351	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	178.998836122846	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACCTAGTTGTTCTA	NA	False	NA	-6	True	AATAAA	-17	NA	127673761	127643042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663773_127663857_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.39	chr2	-	4723	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	188.629371865984	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACCTAGTTGTTCTA	NA	False	NA	-6	True	AATAAA	-17	NA	127673756	127643042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127648393_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.4	chr2	-	3986	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-13	652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	178.998836122846	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCTGATTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	127673737	127642383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.41	chr2	-	6233	23	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	18	1	intron_retention	FALSE	canonical	0	0	junction_16	149.684378687759	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127673761	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.42	chr2	-	3159	23	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	2269	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	188.640569504044	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127671455	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646258_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357
ES.20024.44	chr2	-	3455	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	220.933294985915	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127673781	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649445_127649539_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.46	chr2	-	3333	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	186.625027908013	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127673777	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655771_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.47	chr2	-	3434	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	188.172862128594	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127673780	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646575_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.48	chr2	-	3357	6	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-3112	1	intron_retention	FALSE	canonical	3	609	junction_4	45.3166636018143	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	6511	False	NA	-7	True	AATAAA	-16	NA	127650298	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646891_127647199_127647316_127648145
ES.20024.49	chr2	-	5771	23	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_16	185.368406911727	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGACCTAGTTGTTCT	NA	False	NA	-7	True	AATAAA	-16	NA	127673788	127643043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.5	chr2	-	3459	25	FSM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	-40	-1	-34	1	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTTCTAAATACTCT	NA	False	NA	2	True	AATAAA	-25	NA	127673819	127643034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.50	chr2	-	5123	24	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_17	148.249087890926	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGACCTAGTTGTTC	NA	False	NA	-8	True	AATAAA	-15	NA	127673756	127643044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.51	chr2	-	6997	3	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-3995	-1	intron_retention	FALSE	canonical	3	609	junction_1	1	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	5628	False	NA	-9	True	AATAAA	-14	NA	127651181	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127646891_127647199_127647316_127648145
ES.20024.52	chr2	-	3627	26	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	235.273627931394	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673737	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673259_127673560_127673639
ES.20024.53	chr2	-	5578	14	ISM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	13374	1	-3581	-1	intron_retention	FALSE	canonical	3	436	junction_12	68.7468557645715	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127660411	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758
ES.20024.55	chr2	-	5533	23	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_3	191.866236979209	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673780	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646167_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.57	chr2	-	4920	23	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	12	-1	intron_retention	FALSE	canonical	3	436	junction_11	74.6547563429692	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673767	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.58	chr2	-	5942	23	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_16	194.865990188723	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673768	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127659394_127661128_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.59	chr2	-	7927	22	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_15	198.74666243151	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673778	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.60	chr2	-	4363	18	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	8095	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	213.990589321912	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127665629	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861
ES.20024.61	chr2	-	3403	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	189.057732951839	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673779	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659389_127661127_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.62	chr2	-	5388	24	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	4	junction_18	145.297582648954	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGACCTAGTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	127673788	127643045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663857_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.64	chr2	-	4174	16	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-4455	-2	intron_retention	FALSE	canonical	2	5	junction_8	171.611369734707	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATGTGACCTAGTTGT	NA	False	NA	-10	True	AATAAA	-13	NA	127661285	127643046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127651218_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132
ES.20024.67	chr2	-	4504	24	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_17	147.823874663753	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATGTGACCTAGTTG	NA	False	NA	-11	True	AATAAA	-12	NA	127673756	127643047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.68	chr2	-	3380	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	188.944362769103	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATGTGACCTAGTTG	NA	False	NA	-11	True	AATAAA	-12	NA	127673756	127643047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656663_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.69	chr2	-	4817	24	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-27	-3	intron_retention	FALSE	non_canonical	0	0	junction_15	223.338156048334	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATGTGACCTAGTTG	NA	False	NA	-11	True	AATAAA	-12	NA	127673751	127643047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659394_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671499_127671597_127671658_127673639
ES.20024.70	chr2	-	3381	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	145.15221297161	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATGTGACCTAGTTG	NA	False	NA	-11	True	AATAAA	-12	NA	127673767	127643047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663874_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.71	chr2	-	4237	23	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-26	-75	intron_retention	FALSE	canonical	0	0	junction_16	194.754772695314	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCACTTTGAATCCTATT	NA	False	NA	-83	True	AATAAA	-43	NA	127673750	127643119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.72	chr2	-	3240	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-19	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	178.998836122846	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTAGTAAATTTAAAC	NA	False	NA	-102	True	AATAAA	-24	NA	127673743	127643138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.73	chr2	-	8209	21	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-5	-98	intron_retention	FALSE	canonical	3	436	junction_12	67.817309737264	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACACTTAGTAAATTT	NA	False	NA	-106	True	AATAAA	-20	NA	127673790	127643142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127661285_127663594_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.74	chr2	-	3287	25	FSM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	23	108	23	-99	multi-exon	FALSE	canonical	0	0	junction_18	145.15221297161	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACACTTAGTAAATT	NA	False	NA	-107	True	AATAAA	-19	NA	127673756	127643143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.75	chr2	-	3649	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-7707	-100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	188.309954301117	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACACACTTAGTAAAT	NA	False	NA	-108	True	AATAAA	-18	NA	127681492	127643144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127681012
ES.20024.77	chr2	-	2419	19	NNC	ENSMUSG00000027379.15	novel	1137	6	NA	NA	23	1497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	209.084040047224	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	127673756	127649335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_127649539_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.78	chr2	-	1712	13	ISM	ENSMUSG00000027379.15	ENSMUST00020183811.1	3418	25	23	13381	23	-3960	5prime_fragment	FALSE	canonical	0	0	junction_6	189.561042645605	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTTGCAGTGTTGTGA	NA	False	NA	NA	False	AATAAA	-20	NA	127673756	127656416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663777_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ES.20024.80	chr2	-	2956	2	ISM	ENSMUSG00000027379.15	ENSMUST00000133943.2	1137	6	-2	5302	-2	-5302	intron_retention	FALSE	canonical	3	726	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	127673726	127670669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_127671497_127671597
ES.20024.81	chr2	-	3060	1	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	-7	-5304	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	127673731	127670671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_127670700_127673700
ES.20025.1	chr2	-	175	1	Intergenic	novelGene_16587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGCAAGTCAGGGA	5717	False	NA	NA	False	NA	NA	NA	127724187	127724012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127724000_127724200
ES.20026.1	chr2	-	174	1	Intergenic	novelGene_16588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	127766056	127765882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127765900_127766100
ES.20027.1	chr2	-	177	1	Intergenic	novelGene_16590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGTTTCACTGA	5971	False	NA	NA	False	NA	NA	NA	127825875	127825698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127825700_127825900
ES.20028.1	chr2	+	4931	5	FSM	ENSMUSG00000027381.17	ENSMUST00000103210.2	3538	5	-65	-1328	-53	9	multi-exon	FALSE	canonical	3	10	junction_1	9.78199877325692	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGTGTGTTCTTATAATT	NA	False	NA	NA	False	AATAAA	-28	NA	127967904	128004476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970677_127970844_127970935_127989004_127989115_128000150
ES.20028.10	chr2	+	3198	2	ISM	ENSMUSG00000027381.17	ENSMUST00000129206.2	974	4	-86	-1348	-86	-2	intron_retention	FALSE	canonical	3	32	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTGACTGCCTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	127969408	127973413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127969733_127970539
ES.20028.11	chr2	+	4400	5	NNC	ENSMUSG00000027381.17	novel	974	4	NA	NA	-69	2	intron_retention	TRUE	non_canonical	0	0	junction_4	14.4113670413323	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTCGATGTGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	127969425	128004469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127969733_127970539_127970935_127989004_127989115_128000150_128002016_128002746
ES.20028.12	chr2	+	5112	4	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	-51	1	intron_retention	FALSE	canonical	3	31	junction_3	2.16024689946929	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTTCGATGTGTGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	127969443	128004468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127969733_127970539_127970935_127989004_127989115_128000150
ES.20028.13	chr2	+	4872	5	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	19	-1	intron_retention	FALSE	canonical	3	24	junction_2	4.32290411644765	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	127969513	128004466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127969733_127970539_127970677_127970844_127970935_127989004_127989115_128000150
ES.20028.14	chr2	+	3722	4	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	20	1	intron_retention	FALSE	canonical	3	31	junction_3	2.16024689946929	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCACTGT	NA	False	NA	NA	False	CATAAA	-6	NA	127969514	128003149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127969733_127970539_127970935_127989004_127989115_128000150
ES.20028.15	chr2	+	5082	3	ISM	ENSMUSG00000027381.17	ENSMUST00000129206.2	974	4	32	-3518	32	2168	intron_retention	FALSE	canonical	3	24	junction_2	4	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTAAAATTTTAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127969526	127975583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_127969733_127970539_127970677_127970844
ES.20028.17	chr2	+	3410	4	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	87	14	intron_retention	FALSE	canonical	2	2	junction_2	13.9124245031395	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTTTCCAAACTTC	NA	False	NA	NA	False	AGTAAA	-11	NA	127969581	128003162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127969733_127970539_127970677_127989004_127989115_128000150
ES.20028.18	chr2	+	3175	5	NIC	ENSMUSG00000027381.17	novel	974	4	NA	NA	137	6	intron_retention	FALSE	canonical	3	24	junction_2	4.32290411644765	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTCTTCAAATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	127969631	128002887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_127969733_127970539_127970677_127970844_127970935_127989004_127989115_128000150
ES.20028.19	chr2	+	3797	4	NNC	ENSMUSG00000027381.17	novel	5036	4	NA	NA	792	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.9234278833282	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	127970842	128004466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127970935_127989004_127989115_128000150_128002010_128002730
ES.20028.2	chr2	+	5077	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	-42	1	-41	-1	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	127967916	128004466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
ES.20028.20	chr2	+	4371	1	Intergenic	novelGene_16592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAGTGCTAATATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	127982470	127986841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_127982500_127986800
ES.20028.3	chr2	+	4347	5	NNC	ENSMUSG00000027381.17	novel	3538	5	NA	NA	-40	-5	intron_retention	TRUE	non_canonical	0	0	junction_4	14.7880864211703	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGAACTGTTCGATGT	NA	False	NA	NA	False	AATAAA	-14	NA	127967917	128004462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150_128002016_128002740
ES.20028.4	chr2	+	3759	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	-41	1318	-40	1	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCACTGT	NA	False	NA	NA	False	CATAAA	-6	NA	127967917	128003149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
ES.20028.5	chr2	+	4816	4	FSM	ENSMUSG00000027381.17	ENSMUST00000103211.8	672	4	-41	-4103	-39	-2	multi-exon	FALSE	canonical	2	2	junction_2	12.2292908852294	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAACTGTTCGATGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	127967918	128004465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970677_127989004_127989115_128000150
ES.20028.6	chr2	+	2085	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	-1	2952	0	1153	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTCTGCCTGCTTTGC	NA	False	NA	NA	False	AGTAAA	-16	NA	127967957	128001515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
ES.20028.8	chr2	+	1902	5	FSM	ENSMUSG00000027381.17	ENSMUST00000103210.2	3538	5	1	1635	1	1151	multi-exon	FALSE	canonical	3	10	junction_1	9.78199877325692	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGATGTCTGCCTGCTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	127967970	128001513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_127968173_127970539_127970677_127970844_127970935_127989004_127989115_128000150
ES.20028.9	chr2	+	3005	5	NNC	ENSMUSG00000027381.17	novel	3538	5	NA	NA	1	25	intron_retention	FALSE	non_canonical	0	0	junction_4	14.7880864211703	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACTTCTCATAATTAAG	NA	False	NA	NA	False	AGTAAA	-22	NA	127967970	128003173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150_128002016_128002740
ES.20029.1	chr2	-	4280	1	Intergenic	novelGene_16591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCAAAACTTAAGACTGC	NA	False	NA	NA	False	NA	NA	NA	127978789	127974509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_127974500_127978800
ES.2003.1	chr1	+	213	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAATAAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	178221302	178221515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178221300_178221500
ES.20030.1	chr2	-	694	3	NNC	ENSMUSG00000074813.15	novel	1119	6	NA	NA	60021	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAACACAAAGAAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	128021542	128020255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128020616_128020987_128021069_128021289
ES.20031.1	chr2	+	162	1	Intergenic	novelGene_16593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACCC	8391	False	NA	NA	False	NA	NA	NA	128023576	128023738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_128023600_128023700
ES.20032.1	chr2	-	156	1	Intergenic	novelGene_16594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	128138763	128138607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128138600_128138800
ES.20033.1	chr2	-	832	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239198.2	3309	3	507	1970	4	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTGCCCTCCCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	128271276	128142552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128142917_128172764_128172970_128271013
ES.20033.2	chr2	-	215	1	Intergenic	novelGene_16595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACAAGCTAATGTAGGC	NA	False	NA	NA	False	NA	NA	NA	128147441	128147226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128147200_128147400
ES.20033.3	chr2	-	174	1	Intergenic	novelGene_16596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCACAAGCAG	NA	False	NA	NA	False	NA	NA	NA	128201089	128200915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128200900_128201100
ES.20034.1	chr2	-	5552	1	Intergenic	novelGene_16597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	128327998	128322446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128322400_128328000
ES.20035.1	chr2	+	910	4	ISM	ENSMUSG00000074812.13	ENSMUST00000144559.8	1246	11	1244	3858	1244	740	internal_fragment	FALSE	canonical	1	1	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAGAGCTTCAGACGGC	4872	False	NA	NA	False	AATAAA	-26	NA	128434435	128436526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128434624_128434804_128434922_128435756_128435874_128436038
ES.20036.1	chr2	-	1049	1	Antisense	novelGene_ENSMUSG00000074812.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	128440360	128439311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_128439300_128440400
ES.20037.1	chr2	+	1386	1	Intergenic	novelGene_16598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGCAGAAGGCCCCCC	NA	False	NA	NA	False	NA	NA	NA	128512317	128513703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_128512300_128513700
ES.20037.2	chr2	+	2399	1	Antisense	novelGene_ENSMUSG00000014355.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACAGACACAGGGTAC	NA	False	NA	NA	False	NA	NA	NA	128512317	128514716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_128512300_128514700
ES.20038.1	chr2	+	2876	1	Intergenic	novelGene_16599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128522732	128525608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_128522700_128525600
ES.20039.1	chr2	-	10357	50	Fusion	ENSMUSG00000109931.2_ENSMUSG00000014355.11	novel	8942	48	NA	NA	4	253	multi-exon	FALSE	canonical	2	7	junction_1	83.2071926055141	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTTTGTCCTTTTGA	NA	False	NA	5	True	AATAAA	-19	NA	128529307	128443431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_128443815_128446511_128446668_128451143_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.10	chr2	-	14453	44	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	-596	intron_retention	FALSE	canonical	3	297	junction_38	39.4002083711028	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCAGATCTTAATTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	128529306	128452619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128501926_128502724_128505983_128507367_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.100	chr2	-	5703	30	ISM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	7	25481	7	6492	5prime_fragment	FALSE	canonical	3	297	junction_24	32.453607242767	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCAGTAGTGTCCTAG	NA	False	NA	NA	False	NA	NA	NA	128529304	128477504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.101	chr2	-	4213	28	FSM	ENSMUSG00000014355.11	ENSMUST00000110333.2	4214	28	1	0	0	0	multi-exon	FALSE	canonical	3	297	junction_22	33.6187778216613	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTCTTCATATTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	128529295	128483996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.102	chr2	-	4132	28	NNC	ENSMUSG00000014355.11	novel	3007	5	NA	NA	0	-2350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5084429205982	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTGTTTTTGATGA	NA	False	NA	NA	False	AATAAA	-16	NA	128529295	128486346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128486907_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.103	chr2	-	3503	18	NIC	ENSMUSG00000014355.11	novel	4214	28	NA	NA	7	-916	combination_of_known_splicesites	FALSE	canonical	2	6	junction_17	90.2682660827807	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCTAGGCAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	128529304	128500556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
ES.20039.104	chr2	-	3731	19	ISM	ENSMUSG00000014355.11	ENSMUST00000110333.2	4214	28	-10	16571	5	-927	5prime_fragment	FALSE	canonical	3	297	junction_13	34.2219065642008	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCCTCAGAGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	128529306	128500567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.11	chr2	-	8121	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-12	-596	combination_of_known_splicesites	FALSE	canonical	2	6	junction_46	67.4057663304377	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCAGATCTTAATTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	128529323	128452619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
ES.20039.15	chr2	-	8625	49	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	4	-596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	85.3112764462523	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCAGATCTTAATTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	128529307	128452619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128483631_128483915_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.17	chr2	-	4345	1	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	3097	-597	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCAGATCTTAATTCC	9508	False	NA	NA	False	AATAAA	-20	NA	128456965	128452620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128452600_128457000
ES.20039.18	chr2	-	4076	3	ISM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	68260	597	-989	-597	3prime_fragment	FALSE	canonical	3	462	junction_1	9.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCAGATCTTAATTCC	6477	False	NA	NA	False	AATAAA	-20	NA	128461051	128452620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_128454984_128457289_128457425_128459473
ES.20039.2	chr2	-	8648	44	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7	23	combination_of_known_splicesites	FALSE	canonical	1	1	junction_41	68.8484041808356	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTATGCCAGTGATTC	NA	False	NA	1	True	NA	NA	NA	128529304	128452000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128526421_128526584_128527743_128527981_128529072
ES.20039.21	chr2	-	8275	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	2	-597	combination_of_known_splicesites	FALSE	canonical	2	6	junction_44	67.162993343494	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCAGATCTTAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	128529293	128452620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128526421_128526584_128527743_128527981_128529072
ES.20039.22	chr2	-	6386	21	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	14661	-597	intron_retention	FALSE	canonical	3	346	junction_11	37.3963902001249	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCCAGATCTTAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	128490436	128452620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224
ES.20039.25	chr2	-	8458	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	6	-599	intron_retention	FALSE	canonical	0	0	junction_17	85.7502197608608	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGCCAGATCTTAATT	NA	False	NA	NA	False	AATAAA	-18	NA	128529305	128452622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476710_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526579_128527743_128527981_128529072
ES.20039.27	chr2	-	8218	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-2	-712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	67.2590109845797	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTTTCCTTTAGAAT	NA	False	NA	NA	False	AAAACA	-26	NA	128529298	128452735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499196_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.28	chr2	-	8103	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	-13	852	-13	-852	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACATGGGCTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	128529324	128452875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.3	chr2	-	8960	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	5	-23	5	23	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTATGCCAGTGATTC	NA	False	NA	1	True	NA	NA	NA	128529306	128452000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.30	chr2	-	6397	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	-52	2597	-52	-2597	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCTTTGGACTTCAG	NA	False	NA	1	True	AATAAA	-26	NA	128529363	128454620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.31	chr2	-	6324	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-2	-2597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	85.639579744602	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCTTTGGACTTCAG	NA	False	NA	1	True	AATAAA	-26	NA	128529298	128454620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476358_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520203_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.35	chr2	-	6325	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	1	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	67.418256927441	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529294	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517806_128518015_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.37	chr2	-	6329	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	67.057599073343	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529304	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511575_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.38	chr2	-	6244	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-3	-2600	combination_of_known_junctions	FALSE	canonical	2	6	junction_43	66.9816617117781	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529314	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.39	chr2	-	7195	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2600	intron_retention	FALSE	canonical	3	297	junction_41	39.6519117077524	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529295	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.4	chr2	-	8957	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	85.3737396319355	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGTATGCCAGTGATT	NA	False	NA	0	True	NA	NA	NA	128529306	128452001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461264_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508480_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.40	chr2	-	7627	46	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-2	-2600	intron_retention	FALSE	canonical	3	297	junction_40	39.9727067378557	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529298	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.42	chr2	-	3185	25	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	63	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	86.8163771032478	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529211	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487087_128526561_128526584_128527743_128527981_128529072
ES.20039.43	chr2	-	6232	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	2	-2600	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	67.5836420796378	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529293	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.44	chr2	-	6262	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-4	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.9809721237382	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529315	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464416_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.45	chr2	-	6341	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	1	-2600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	67.1607262523787	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529294	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522146_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.46	chr2	-	6107	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7	-2600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	86.5866181263787	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529304	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470620_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
ES.20039.49	chr2	-	6388	49	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-6	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	98.7511932944779	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529302	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128480181_128480242_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526579_128527743_128527981_128529072
ES.20039.5	chr2	-	8906	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_42	66.0561032929919	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGACTTTAGCAATGTCA	NA	False	NA	-22	True	NA	NA	NA	128529295	128452023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521459_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.52	chr2	-	6252	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	6	-2600	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	67.3275541461776	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529305	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499129_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.54	chr2	-	6245	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	3	-2600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	67.1754361724041	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529292	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518142_128521417_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.55	chr2	-	6100	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	-2600	combination_of_known_splicesites	FALSE	canonical	2	6	junction_46	67.4057663304377	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529306	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
ES.20039.57	chr2	-	6341	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7	-2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	67.418256927441	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529304	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518015_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.6	chr2	-	8320	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-2	-589	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_42	66.0561032929919	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTAATTCCTGTTCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	128529298	128452612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521459_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.64	chr2	-	6320	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2600	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	66.7513103823037	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529295	128454623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461264_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.67	chr2	-	6280	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-1	-2602	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_28	100.94157443105	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTGATTGCTTTGGAC	NA	False	NA	-4	True	AATAAA	-21	NA	128529297	128454625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499190_128500163_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510842_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526579_128527785_128527981_128529072
ES.20039.68	chr2	-	6302	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-15	-2603	combination_of_known_splicesites	FALSE	canonical	2	6	junction_44	67.162993343494	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGATTGCTTTGGA	NA	False	NA	-5	True	AATAAA	-20	NA	128529326	128454626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128526421_128526584_128527743_128527981_128529072
ES.20039.70	chr2	-	7713	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	1	-2604	intron_retention	FALSE	canonical	0	0	junction_28	67.894158288314	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529294	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499190_128500167_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.73	chr2	-	6218	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-4	-2604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	86.201334017631	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529300	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527799_128528014_128529158
ES.20039.74	chr2	-	6322	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	99.5566405208472	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529295	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465867_128466773_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492296_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522309_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.75	chr2	-	3421	15	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-3367	-2604	intron_retention	FALSE	canonical	3	346	junction_12	33.0861583982036	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128475322	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256
ES.20039.77	chr2	-	8580	46	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	-2604	intron_retention	FALSE	non_canonical	0	0	junction_18	68.2834904038187	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529306	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476688_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421
ES.20039.78	chr2	-	3622	18	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-7526	-2604	intron_retention	FALSE	canonical	3	346	junction_13	34.7774934180557	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128479481	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128476436_128476557_128476693_128479027
ES.20039.79	chr2	-	8353	45	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	1256	-2604	intron_retention	FALSE	canonical	3	297	junction_41	40.1831743395168	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128528018	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421
ES.20039.8	chr2	-	8225	47	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	4	-594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	85.9830510400891	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGATCTTAATTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	128529291	128452617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510978_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.80	chr2	-	5265	41	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	11226	-2604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	71.2777972092292	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128518048	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507423_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021
ES.20039.85	chr2	-	6302	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2604	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_42	66.0561032929919	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529295	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521459_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.86	chr2	-	8648	45	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	5	-2604	intron_retention	FALSE	canonical	3	297	junction_39	40.339026844693	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATTGCTTTGG	NA	False	NA	-6	True	AATAAA	-19	NA	128529306	128454627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.88	chr2	-	6326	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	6	-2605	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	67.3810203344593	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTATTGATTGCTTTG	NA	False	NA	-7	True	AATAAA	-18	NA	128529305	128454628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474595_128475263_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.9	chr2	-	8351	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	-3	594	-3	-594	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGATCTTAATTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	128529314	128452617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.96	chr2	-	6314	48	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7	-2608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	67.3810203344593	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAACTATTGATTGCT	NA	False	NA	-10	True	AATAAA	-15	NA	128529304	128454631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518155_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ES.20039.97	chr2	-	4236	32	NNC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	7145	-1471	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	93.9083619122639	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTGTATTCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	128522129	128471933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128480165_128480242_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028
ES.20039.98	chr2	-	3494	1	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-3492	-1491	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGCAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	128475447	128471953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128472000_128475400
ES.20039.99	chr2	-	2245	3	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	-4689	-1522	intron_retention	FALSE	canonical	3	384	junction_2	7	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128476644	128471984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128472225_128474517_128476436_128476557
ES.2004.1	chr1	+	3239	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-105	446	-87	-446	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGATTGATGAGTCAG	NA	False	NA	NA	False	AATGAA	-30	NA	178233562	178311632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.2	chr1	+	3747	6	NIC	ENSMUSG00000026495.9	novel	3580	7	NA	NA	-81	141	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.9859222558726	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCCTTTATTTGTATG	NA	False	NA	NA	False	AATATA	-29	NA	178233568	178312219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_178233699_178264966_178265052_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.3	chr1	+	798	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-98	2880	-80	162	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTATGGAAGGACAAGT	NA	False	NA	NA	False	CATAAA	-17	NA	178233569	178309198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.4	chr1	+	672	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-90	2998	-72	44	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTCACATTTTATTG	NA	False	NA	NA	False	NA	NA	NA	178233577	178309080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.5	chr1	+	3651	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-71	0	-53	0	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTCTGCTTTGTGT	NA	False	NA	8	True	NA	NA	NA	178233596	178312078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.6	chr1	+	3782	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-61	-141	-43	141	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCCTTTATTTGTATG	NA	False	NA	NA	False	AATATA	-29	NA	178233606	178312219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.8	chr1	+	1077	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	-13	2516	5	526	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTGCCATTTATGGA	NA	False	NA	NA	False	AGTAAA	-19	NA	178233654	178309562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ES.2004.9	chr1	+	158	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	178254929	178255087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178254900_178255100
ES.20040.1	chr2	-	383	1	Intergenic	novelGene_16600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACAATATGAATCGCA	NA	False	NA	NA	False	NA	NA	NA	128533234	128532851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128532900_128533200
ES.20040.2	chr2	-	148	1	Intergenic	novelGene_16601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAACAAACAAATC	NA	False	NA	NA	False	NA	NA	NA	128533237	128533089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128533100_128533200
ES.20041.10	chr2	+	178	1	Intergenic	novelGene_16602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	128553778	128553956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_128553800_128554000
ES.20041.11	chr2	+	2575	17	ISM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	37613	1164	-34744	-948	3prime_fragment	FALSE	canonical	2	5	junction_1	3.03108891324554	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTTGTTATTGCTCT	NA	False	NA	NA	False	AATACA	-24	NA	128578488	128643650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.12	chr2	+	4981	1	NIC	ENSMUSG00000014361.6	novel	4302	19	NA	NA	-25118	-51503	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGTGACTCCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	128588114	128593095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128588100_128593100
ES.20041.2	chr2	+	2165	8	ISM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-130	40002	-130	-39786	5prime_fragment	TRUE	canonical	2	5	junction_3	3.20713490294909	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATTTCGGCCACTGT	NA	False	NA	NA	False	NA	NA	NA	128540745	128604812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996
ES.20041.3	chr2	+	4695	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-128	-265	-128	265	multi-exon	FALSE	canonical	2	5	junction_3	3.05302925867424	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTGTGTTCCACATGC	NA	False	NA	NA	False	AATAAA	-12	NA	128540747	128645079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.4	chr2	+	4534	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-115	-117	-115	117	multi-exon	FALSE	canonical	2	5	junction_3	3.05302925867424	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGTTTGCCTTCATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	128540760	128644931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.5	chr2	+	4676	20	NNC	ENSMUSG00000014361.6	novel	4302	19	NA	NA	-92	114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.47523193041712	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCAGGTTTGCCTTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	128540783	128644928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128541024_128541162_128541331_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.7	chr2	+	4558	19	NNC	ENSMUSG00000014361.6	novel	4302	19	NA	NA	-84	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3.86221007541882	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGTTTGCCTTCATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	128540791	128644931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621848_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.8	chr2	+	4390	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	-82	-6	-82	6	multi-exon	FALSE	canonical	2	5	junction_3	3.05302925867424	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTCAAAATGTATCCCT	NA	False	NA	NA	False	AATAAA	-26	NA	128540793	128644820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20041.9	chr2	+	4478	19	NNC	ENSMUSG00000014361.6	novel	4302	19	NA	NA	-42	264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.89087250997625	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGTGTGTTCCACATG	NA	False	NA	NA	False	AATAAA	-11	NA	128540833	128645078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618335_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ES.20042.1	chr2	-	239	1	Intergenic	novelGene_16603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTAGATGCTTCTTA	NA	False	NA	NA	False	AATAAA	-41	NA	128658873	128658634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128658600_128658900
ES.20043.1	chr2	+	4842	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	-220	-2522	-35	0	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660002	128696181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.11	chr2	+	4557	20	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.1280100759871	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTTTCCTGGGATTA	NA	False	NA	7	True	AATAAA	-18	NA	128660230	128696179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660312_128660366_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.12	chr2	+	4424	18	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.1841780566676	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGATTGTTTCCTGG	NA	False	NA	2	True	AATAAA	-13	NA	128660230	128696174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673490_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.14	chr2	+	7261	17	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	10	-1	intron_retention	FALSE	canonical	1	36	junction_9	27.8242250565941	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660232	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.15	chr2	+	4554	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	10	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	39.8761057054017	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGATTGTTTCCTGG	NA	False	NA	2	True	AATAAA	-13	NA	128660232	128696174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.19	chr2	+	5802	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	11	-3	intron_retention	FALSE	canonical	1	36	junction_11	25.8501136110158	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGTTTCCTGGGATT	NA	False	NA	6	True	AATAAA	-17	NA	128660233	128696178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.2	chr2	+	4594	17	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	52.3760441423367	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660003	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128676034_128676135_128679221_128679316_128681067_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.21	chr2	+	1916	1	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	12	-29495	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128660234	128662150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660200_128662200
ES.20043.22	chr2	+	6167	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	12	-4079	12	1557	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTAAGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	128660234	128697738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.23	chr2	+	2716	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	12	-628	12	575	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTTGAATGTAGAGTGA	NA	False	NA	NA	False	AATATA	-20	NA	128660234	128694287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.24	chr2	+	7696	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	12	-1	intron_retention	FALSE	canonical	1	36	junction_10	27.0857921872022	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660234	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.26	chr2	+	4605	19	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	33.5082447934207	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660236	128696181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682732_128683165_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.27	chr2	+	3306	5	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.2633385144983	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660239	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128690924_128690978_128692223_128692255_128693203
ES.20043.28	chr2	+	4125	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	17	-2042	17	-480	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTTTGGAGCTATTGC	NA	False	NA	NA	False	NA	NA	NA	128660239	128695701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.29	chr2	+	6183	19	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	17	-6	combination_of_known_junctions	FALSE	canonical	1	15	junction_10	36.6725584491984	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGATTGTTTCCTGGG	NA	False	NA	3	True	AATAAA	-14	NA	128660239	128696175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.3	chr2	+	3171	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	-187	-884	-2	831	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTGAGTTTATTTCC	NA	False	NA	19	True	AAAACA	-22	NA	128660035	128694543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.30	chr2	+	4284	20	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	38.1280100759871	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGATTGTTTCCTGGG	NA	False	NA	3	True	AATAAA	-14	NA	128660239	128696175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203_128695375_128695689
ES.20043.32	chr2	+	4509	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	20	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	39.8778411468433	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTTTCCTGGGATTA	NA	False	NA	7	True	AATAAA	-18	NA	128660242	128696179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.33	chr2	+	4245	16	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	50.8818238666815	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGGAGATTGTTTCCT	NA	False	NA	0	True	AATAAA	-11	NA	128660242	128696172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128673490_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.34	chr2	+	4581	19	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	49.7594212184989	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTTTCCTGGGATTA	NA	False	NA	7	True	AATAAA	-18	NA	128660242	128696179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687436_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.35	chr2	+	8199	16	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	20	831	intron_retention	FALSE	non_canonical	0	0	junction_5	42.5600751879035	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTGAGTTTATTTCC	NA	False	NA	19	True	AAAACA	-22	NA	128660242	128694543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128671186_128671271_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.36	chr2	+	4352	17	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	41.0609303352956	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTTTCCTGGGATTA	NA	False	NA	7	True	AATAAA	-18	NA	128660244	128696179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.37	chr2	+	4430	18	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	51.0887686653047	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660245	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673475_128673554_128676034_128676135_128679221_128679316_128681067_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.38	chr2	+	4423	18	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	45.1337113820057	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGATTGTTTCCTGGG	NA	False	NA	3	True	AATAAA	-14	NA	128660246	128696175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673475_128673554_128676034_128676135_128679221_128679316_128682651_128682725_128683156_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.39	chr2	+	173	1	Intergenic	novelGene_16604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAAGTGAGCGGGGCCA	NA	False	NA	NA	False	NA	NA	NA	128669156	128669329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_128669200_128669300
ES.20043.4	chr2	+	9108	16	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	36	junction_9	27.5192054148856	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660206	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673554_128676034_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.40	chr2	+	3632	13	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	-9604	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	49.9051183079785	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGATTGTTTCCTGG	NA	False	NA	2	True	AATAAA	-13	NA	128673468	128696174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128673554_128676034_128676135_128679221_128679316_128682651_128682726_128683155_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203_128694591_128694782
ES.20043.41	chr2	+	3748	11	ISM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	15808	-2521	-7042	-1	3prime_fragment	FALSE	canonical	1	36	junction_3	32	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128676030	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.42	chr2	+	2930	10	NNC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	-4773	831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.8493492779399	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTGAGTTTATTTCC	NA	False	NA	19	True	AAAACA	-22	NA	128678299	128694543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128679316_128682651_128682726_128683155_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.43	chr2	+	3551	9	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	-2006	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.509239673424	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128681066	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.44	chr2	+	2875	5	NIC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	294	824	intron_retention	FALSE	canonical	2	4	junction_2	57.1461940989949	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTACTTTCTGAGTT	NA	False	NA	12	True	AAAACA	-15	NA	128683366	128694536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128683404_128684515_128684620_128688648_128688720_128690924_128692255_128693203
ES.20043.45	chr2	+	2335	4	ISM	ENSMUSG00000014353.16	ENSMUST00000152210.2	2096	19	27498	-824	-4078	824	3prime_fragment	FALSE	canonical	3	130	junction_1	3.74165738677394	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTACTTTCTGAGTT	NA	False	NA	12	True	AAAACA	-15	NA	128687801	128694536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.5	chr2	+	4636	19	NNC	ENSMUSG00000014353.16	novel	4807	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	41.8620603741076	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660208	128696181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128681139_128683153_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.7	chr2	+	6070	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	1	831	intron_retention	FALSE	canonical	1	36	junction_10	27.0857921872022	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTGAGTTTATTTCC	NA	False	NA	19	True	AAAACA	-22	NA	128660223	128694543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.8	chr2	+	4482	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	39.5467398994936	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTTTCCTGGGATTAT	NA	False	NA	8	True	AATAAA	-19	NA	128660229	128696180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20043.9	chr2	+	4456	17	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.3191568290827	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATTGTTTCCTGGGATT	NA	False	NA	6	True	AATAAA	-17	NA	128660229	128696178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128660424_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ES.20044.1	chr2	+	1638	8	FSM	ENSMUSG00000027386.10	ENSMUST00000028864.3	2905	8	37	1230	37	-1230	multi-exon	FALSE	canonical	0	0	junction_3	1.27775312999988	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATTACTTGTTTTTTG	1078	False	NA	NA	False	GGGGCT	-40	NA	128705888	128737720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128706068_128719279_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737136
ES.20045.1	chr2	+	3168	4	Antisense	novelGene_ENSMUSG00000027387.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTCTTGAAATGCAGAC	2586	False	NA	NA	False	NA	NA	NA	128771807	128783060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_128773321_128775118_128775253_128777243_128777467_128781762
ES.20045.2	chr2	+	2782	1	Antisense	novelGene_ENSMUSG00000027387.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128780251	128783033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_128780300_128783000
ES.20046.1	chr2	-	4341	7	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	192	-1	intron_retention	FALSE	canonical	3	222	junction_6	22.1766894633883	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785805	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ES.20046.10	chr2	-	5391	6	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	59	-2	intron_retention	FALSE	canonical	3	222	junction_5	22.6044243456895	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785938	128768189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ES.20046.11	chr2	-	5258	5	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	58	-2	intron_retention	FALSE	canonical	2	2	junction_2	108.453907260181	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785939	128768189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128772824_128773197_128773321_128777231_128777467_128781762_128781857_128785767
ES.20046.12	chr2	-	2400	8	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	57	-2	intron_retention	FALSE	canonical	3	222	junction_7	21.296737318382	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785940	128768189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128768732_128770806_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ES.20046.13	chr2	-	1659	10	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	101.223746786909	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785937	128768189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128782283_128782381_128785767
ES.20046.14	chr2	-	9453	2	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	54	-2	intron_retention	FALSE	canonical	3	5	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTTCATACTTGA	NA	False	NA	-1	True	AATAAA	-20	NA	128785943	128768189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128777467_128785767
ES.20046.16	chr2	-	6167	2	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	11265	-4	intron_retention	FALSE	canonical	3	279	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGTGTTTTCATACTT	NA	False	NA	-3	True	AATAAA	-18	NA	128774732	128768191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128772824_128773197
ES.20046.2	chr2	-	1619	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	4	1	4	-1	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785993	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ES.20046.3	chr2	-	1708	10	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	108.425886390226	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785943	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128784202_128784354_128785767
ES.20046.4	chr2	-	2369	8	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	77	-1	intron_retention	FALSE	canonical	3	42	junction_5	73.3902067647966	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785920	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128770806_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
ES.20046.5	chr2	-	3658	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	57	-1	intron_retention	FALSE	canonical	0	0	junction_2	105.616049916667	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785940	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128769330_128769444_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128777467_128781762_128781857_128785767
ES.20046.6	chr2	-	3332	7	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	44	-1	intron_retention	FALSE	canonical	3	222	junction_6	21.9146070008111	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785953	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128768732_128770806_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ES.20046.7	chr2	-	1552	9	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	59	-1	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_6	71.0922595997623	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128785938	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777243_128777467_128781762_128781857_128785767
ES.20046.8	chr2	-	1399	8	NNC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	-673	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	107.102659125891	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128786670	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128777231_128777467_128781762_128781857_128786530
ES.20046.9	chr2	-	7131	2	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	9760	-1	intron_retention	FALSE	canonical	3	225	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	False	NA	0	True	AATAAA	-21	NA	128776237	128768188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_128770849_128771766
ES.20047.1	chr2	+	4538	12	NNC	ENSMUSG00000042851.18	novel	4916	12	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.7138921583987	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACGACTGGTTCTATAA	6897	False	NA	1	True	AATAAA	-15	NA	128809286	128860480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128809352_128833010_128833192_128835078_128835202_128839529_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ES.20047.3	chr2	+	4937	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	-21	0	-21	0	multi-exon	FALSE	non_canonical	1	6	junction_7	5.58036700117193	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGACTGGTTCTATAACAG	6911	False	NA	4	True	AATAAA	-18	NA	128809300	128860483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ES.20047.4	chr2	+	5433	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	-13	-504	-13	504	multi-exon	FALSE	non_canonical	1	6	junction_7	5.58036700117193	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCCAAAGTAGTAAAATT	6919	False	NA	NA	False	AATAAA	-38	NA	128809308	128860987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ES.20047.6	chr2	+	5601	15	NIC	ENSMUSG00000042851.18	novel	4916	12	NA	NA	2	3379	intron_retention	FALSE	non_canonical	0	0	junction_12	7.36961494854351	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAAGTAGTTATTT	6941	False	NA	NA	False	AATAAA	-12	NA	128809330	128863862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041_128860777_128863220_128863332_128863452_128863537_128863656
ES.20047.7	chr2	+	4121	16	NNC	ENSMUSG00000042851.18	novel	4916	12	NA	NA	12	3377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	7.69415362466854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGAAGTAGTTAT	6951	False	NA	NA	False	AATAAA	-10	NA	128809340	128863860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041_128859113_128860610_128860777_128863203_128863345_128863452_128863537_128863656
ES.20047.9	chr2	+	4594	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	35	287	28	-287	multi-exon	FALSE	non_canonical	1	6	junction_7	5.58036700117193	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATGTTTATGTATTTC	6967	False	NA	NA	False	ATTAAA	-28	NA	128809356	128860196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ES.20048.1	chr2	-	2543	1	FSM	ENSMUSG00000074807.4	ENSMUST00000238197.2	2540	1	-4	1	-4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGTTGTACTGTGTGA	9119	False	NA	NA	False	NA	NA	NA	128809968	128807425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128807400_128810000
ES.20048.2	chr2	-	2232	1	FSM	ENSMUSG00000074807.4	ENSMUST00000238197.2	2540	1	4	304	4	-304	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATCC	9127	False	NA	NA	False	NA	NA	NA	128809960	128807728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128807700_128810000
ES.20048.3	chr2	-	1873	1	FSM	ENSMUSG00000074807.4	ENSMUST00000238197.2	2540	1	-31	698	-31	390	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATTTGAGTATTGCTG	9092	False	NA	NA	False	AATAAA	-20	NA	128809995	128808122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128808100_128810000
ES.20048.4	chr2	-	1226	1	FSM	ENSMUSG00000074807.4	ENSMUST00000099385.3	1133	1	-297	204	22	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGATCTTGTGTCTG	9145	False	NA	NA	False	ATTAAA	-20	NA	128809942	128808716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128808700_128809900
ES.20049.1	chr2	-	176	1	Intergenic	novelGene_16605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAGAGAAGTGAAT	5837	False	NA	NA	False	NA	NA	NA	128813250	128813074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128813100_128813200
ES.2005.1	chr1	-	2619	1	Antisense	novelGene_ENSMUSG00000026495.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAGTTTGTACTCCTTT	NA	False	NA	NA	False	AATAAA	-27	NA	178234030	178231411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_178231400_178234000
ES.20050.1	chr2	-	174	1	Intergenic	novelGene_16606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	128825397	128825223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128825200_128825400
ES.20051.1	chr2	-	251	1	Intergenic	novelGene_16607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAAAATACTGTTG	NA	False	NA	NA	False	NA	NA	NA	128851091	128850840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128850800_128851100
ES.20052.1	chr2	-	179	1	Intergenic	novelGene_16608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCAC	NA	False	NA	NA	False	NA	NA	NA	128854896	128854717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128854700_128854900
ES.20053.1	chr2	-	199	1	Intergenic	novelGene_16609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTAGCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	128861510	128861311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128861300_128861500
ES.20054.1	chr2	+	1756	7	NNC	ENSMUSG00000027394.14	novel	1238	4	NA	NA	-3725	-2537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.7174045252484	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATAATCTTACTTTAC	NA	False	NA	NA	False	AAAACA	-10	NA	128904136	128935666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128904241_128905357_128905421_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ES.20054.10	chr2	+	2151	7	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	16	-4131	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	41.6719996587103	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGTGTGGTGGTGTGT	NA	False	NA	NA	False	AATATA	-25	NA	128907877	128927570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128909291_128909510_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128926701
ES.20054.11	chr2	+	2216	8	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	16	-2553	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	38.1554286398918	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128907877	128935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128909291_128909510_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ES.20054.12	chr2	+	2320	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	17	6033	17	469	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTGAATGCTAGGCCC	NA	False	NA	NA	False	AATAAA	-17	NA	128907878	128932170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
ES.20054.13	chr2	+	1805	6	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	35.6426710559127	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTTCAGTCCTCCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	128907881	128931703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923938_128924164_128930913
ES.20054.15	chr2	+	3177	8	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	4	-2553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.9048217276388	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128907908	128935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128926701_128927912_128930913_128931058_128934860
ES.20054.16	chr2	+	1866	6	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	26	-2553	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	33.4687914332143	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128907930	128935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128908224_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ES.20054.2	chr2	+	1809	8	NNC	ENSMUSG00000027394.14	novel	1238	4	NA	NA	-3715	-2553	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.5910003254962	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128904146	128935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128904241_128905357_128905421_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ES.20054.3	chr2	+	1797	5	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	37.3589012151053	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTGTTCAGTCCTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	128907853	128931701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128908224_128917775_128918009_128923129_128923266_128923893_128924164_128930913
ES.20054.4	chr2	+	1875	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	-5	6500	-5	2	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTTCAGTCCTCCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	128907856	128931703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
ES.20054.5	chr2	+	1626	6	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	-2	6746	-2	-244	5prime_fragment	FALSE	canonical	3	70	junction_4	9.64157663455516	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGCCCTGGCACCATC	NA	False	NA	NA	False	AATAAA	-29	NA	128907859	128931457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913
ES.20054.6	chr2	+	1891	6	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	-1	-2553	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	41.4342853202514	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128907860	128935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128917775_128918009_128923129_128923266_128923938_128924164_128930913_128931058_128934860
ES.20054.7	chr2	+	2030	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	0	2537	0	-2537	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATAATCTTACTTTAC	NA	False	NA	NA	False	AAAACA	-10	NA	128907861	128935666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ES.20054.8	chr2	+	4218	8	NNC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	2	-1614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	41.4964960409125	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGAATTCTGTCATAG	NA	False	NA	NA	False	ATTAAA	-33	NA	128907863	128930087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128908224_128909291_128909510_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128926701_128928417_128928880
ES.20054.9	chr2	+	2642	1	NIC	ENSMUSG00000027394.14	novel	4567	7	NA	NA	13	491	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGCCACATCACAGCTG	NA	False	NA	NA	False	NA	NA	NA	128907874	128910516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128907900_128910500
ES.20055.1	chr2	-	3448	2	FSM	ENSMUSG00000087151.2	ENSMUST00000143857.2	691	2	-222	-2535	-222	2535	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCTGTGTCCAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	128907828	128900330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128903007_128907056
ES.20055.2	chr2	-	2973	2	FSM	ENSMUSG00000087151.2	ENSMUST00000143857.2	691	2	-222	-2060	-222	2060	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGTCTTCCCTTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	128907828	128900805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_128903007_128907056
ES.20055.3	chr2	-	5211	2	NNC	ENSMUSG00000087151.2	novel	691	2	NA	NA	936	2059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAAGTGTCTTCCCTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	128906670	128900806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_128902133_128902785
ES.20055.4	chr2	-	1350	1	Genic_Genomic	ENSMUSG00000087151.2	novel	NA	NA	NA	NA	-211	-3602	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTAAGGTTAAAACTAG	NA	False	NA	NA	False	AAAACA	-42	NA	128907817	128906467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_128906500_128907800
ES.20056.1	chr2	-	192	1	Intergenic	novelGene_16610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	128925166	128924974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_128925000_128925200
ES.20057.1	chr2	+	2239	1	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	28094	9	17991	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTCCTTGGGTTTGG	NA	False	NA	20	True	ATTAAA	-14	NA	128935955	128938194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128936000_128938200
ES.20058.1	chr2	+	4045	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	-45	-2	-45	2	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGATTTTTATTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	128942869	128968516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.10	chr2	+	7667	12	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	249	junction_5	35.7807834292364	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942926	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128952132_128954561_128954734_128955420_128955703_128957558_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.11	chr2	+	4078	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.5300120025924	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942926	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947076_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.12	chr2	+	7991	13	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	-6	intron_retention	FALSE	canonical	3	249	junction_5	35.2541368730915	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCATATGTGTGATTTT	NA	False	NA	9	True	AATAAA	-10	NA	128942926	128968508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.14	chr2	+	2804	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.7649888553776	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGACCTGACTCCTGAC	NA	False	NA	NA	False	NA	NA	NA	128942926	128966581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128966382
ES.20058.15	chr2	+	5013	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	13	-21	intron_retention	FALSE	canonical	0	0	junction_4	105.992322594514	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAGAAAATGGAAGC	NA	False	NA	-6	True	NA	NA	NA	128942927	128968493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949691_128949800_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.16	chr2	+	3930	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	74.8812665600192	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTATTTTTAT	NA	False	NA	18	True	AATAAA	-19	NA	128942930	128968517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.18	chr2	+	5498	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	17	-1517	-15	1517	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTTGTATGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	128942931	128970031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.19	chr2	+	5677	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	19	-1698	-13	1698	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAACGTTCAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	128942933	128970212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.20	chr2	+	7075	13	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-12	1	intron_retention	FALSE	canonical	3	249	junction_5	34.327163685144	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942934	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.21	chr2	+	3886	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	81.5418072312027	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942935	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128959927_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.23	chr2	+	3628	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	24	346	-8	-346	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTACTGAAGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	128942938	128968168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.24	chr2	+	3802	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	83.1015632974808	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGATTTTTATTT	NA	False	NA	14	True	AATAAA	-15	NA	128942938	128968513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.25	chr2	+	4407	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-3	-5	intron_retention	TRUE	non_canonical	0	0	junction_3	108.263102709483	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942943	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947166_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961122_128964997_128965885_128967133
ES.20058.26	chr2	+	3941	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.623223327649	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942943	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947166_128947302_128949906_128950044_128951150_128951375_128951984_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.27	chr2	+	6574	12	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	-5	intron_retention	FALSE	canonical	3	29	junction_8	103.014642303537	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942946	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128961117_128964989_128965187_128965630
ES.20058.29	chr2	+	4729	13	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_7	87.9458482375503	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCATATGTGTGATTTT	NA	False	NA	9	True	AATAAA	-10	NA	128942946	128968508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128955420_128955703_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.3	chr2	+	3818	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	-7	187	-7	-187	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCAGCCTCATATCTTT	NA	False	NA	NA	False	NA	NA	NA	128942907	128968327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.30	chr2	+	4085	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	81.3106916181911	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942946	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960841_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.31	chr2	+	4644	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	4	-5	intron_retention	FALSE	canonical	3	224	junction_9	37.905051106789	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942950	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.32	chr2	+	4439	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	35	junction_9	75.3206950352406	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942951	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.33	chr2	+	3783	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	6	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	84.50293226942	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942952	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.34	chr2	+	4845	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	29	junction_9	77.6839294797082	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942953	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.35	chr2	+	5250	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	1463	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.8228910209837	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTCTGAAATGGACTT	NA	False	NA	NA	False	NA	NA	NA	128942957	128969977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.37	chr2	+	4293	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	-2	intron_retention	FALSE	canonical	3	35	junction_9	75.407453369469	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGTGTGATTTTTATT	NA	False	NA	13	True	AATAAA	-14	NA	128942957	128968512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.38	chr2	+	8735	11	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_7	95.4496726028958	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942957	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128955420_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.4	chr2	+	3843	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	95.2666772587266	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942908	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.40	chr2	+	3950	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	78.7649888553776	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942957	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967139
ES.20058.41	chr2	+	9486	11	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	16	-1	intron_retention	FALSE	canonical	3	249	junction_5	37.2425831542335	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGATTTTTATTT	NA	False	NA	14	True	AATAAA	-15	NA	128942962	128968513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128952132_128954561_128954734_128955420_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.42	chr2	+	3722	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.570069371135	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGATTTTTATTT	NA	False	NA	14	True	AATAAA	-15	NA	128942962	128968513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128955420_128955648_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.43	chr2	+	4530	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	16	-5	intron_retention	FALSE	canonical	3	224	junction_9	37.9362592161327	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942962	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.44	chr2	+	4048	16	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	114.28222375622	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942993	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128961117_128963789_128964026_128964989_128965187_128965630_128965885_128967133
ES.20058.45	chr2	+	4689	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	56	0	intron_retention	FALSE	canonical	3	29	junction_9	98.8436096649532	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128943002	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.46	chr2	+	6691	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	56	-21	intron_retention	FALSE	canonical	0	0	junction_12	99.6885200030985	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAGAAAATGGAAGC	NA	False	NA	-6	True	NA	NA	NA	128943002	128968493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128964026_128964989_128965187_128965630_128965885_128967133
ES.20058.48	chr2	+	3929	6	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-1777	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	107.635310191405	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGTGTGATTTTTATT	NA	False	NA	13	True	AATAAA	-14	NA	128955814	128968512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.49	chr2	+	7103	3	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-1304	-2	intron_retention	FALSE	canonical	3	297	junction_1	21.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGTGTGATTTTTATT	NA	False	NA	13	True	AATAAA	-14	NA	128956287	128968512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128961117_128964989_128965885_128967133
ES.20058.5	chr2	+	3875	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	72.6723145779908	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	False	NA	10	True	AATAAA	-11	NA	128942925	128968509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.50	chr2	+	5226	5	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	271	1	intron_retention	FALSE	canonical	0	0	junction_1	158.280407821057	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128957862	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128961117_128963886_128964026_128964989_128965187_128965630_128965885_128967133
ES.20058.51	chr2	+	4433	4	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-587	1471	intron_retention	FALSE	canonical	3	289	junction_2	22.3954360429878	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGACTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	128959986	128969985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.52	chr2	+	5740	5	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	-505	1	intron_retention	TRUE	canonical	0	0	junction_1	158.280407821057	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128960068	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128962850_128962899_128964026_128964989_128965187_128965630_128965885_128967133
ES.20058.6	chr2	+	4929	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	1	intron_retention	FALSE	canonical	3	224	junction_10	37.2830211844353	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	128942925	128968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.7	chr2	+	7028	13	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	11	0	intron_retention	FALSE	canonical	3	29	junction_9	79.9013280379132	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942925	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.8	chr2	+	4820	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	35	junction_10	75.3508558630222	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942926	128968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128961117_128964989_128965187_128965630_128965885_128967133
ES.20058.9	chr2	+	3972	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.5551647534304	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGATTTTTATTT	NA	False	NA	14	True	AATAAA	-15	NA	128942926	128968513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128943184_128944882_128945038_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ES.20059.1	chr2	-	6185	2	Antisense	novelGene_ENSMUSG00000027395.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTAAAGTATTGCAAATA	7309	False	NA	NA	False	NA	NA	NA	128960924	128954052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_128954732_128955418
ES.2006.1	chr1	-	1351	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATATATGTATATATAT	NA	False	NA	NA	False	NA	NA	NA	178356072	178354721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_178354700_178356100
ES.20060.1	chr2	+	1373	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	-50	2	-50	-2	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTAGGTTTGTGTG	3775	False	NA	43	True	NA	NA	NA	128971569	128976052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ES.20060.10	chr2	+	4213	2	NIC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	9	-27	intron_retention	FALSE	canonical	3	695	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGCTATGGCTTGGAGA	3938	False	NA	18	True	NA	NA	NA	128971732	128976027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_128972239_128972320
ES.20060.11	chr2	+	2052	5	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	10	4084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	293.44548045591	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGTTAGGATCCATT	3939	False	NA	NA	False	ATTAAA	-12	NA	128971733	128980138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194_128976192_128979434
ES.20060.13	chr2	+	1173	3	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	427	45	277	-45	3prime_fragment	FALSE	canonical	3	695	junction_1	18	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAAAATTGAAAGCCGG	4252	False	NA	0	True	NA	NA	NA	128972046	128976009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128972239_128972320_128972487_128975194
ES.20060.14	chr2	+	2200	4	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	288	4236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	336.432591894556	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAATATATTTGTATAT	4263	False	NA	NA	False	AATAAA	-41	NA	128972057	128980290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128972239_128972320_128972487_128975194_128976192_128979434
ES.20060.2	chr2	+	4445	1	Genic_Genomic	ENSMUSG00000037938.5	novel	NA	NA	NA	NA	-32	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTTGGAGACCTCC	3793	False	NA	23	True	NA	NA	NA	128971587	128976032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_128971600_128976000
ES.20060.3	chr2	+	2384	5	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	-19	4283	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	293.44548045591	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGGTTGCTATTTATG	3806	False	NA	NA	False	ATTAAA	-24	NA	128971600	128980337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194_128976192_128979434
ES.20060.4	chr2	+	1283	4	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	311.648306054544	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTATGGCTTGGAGACC	3826	False	NA	20	True	NA	NA	NA	128971620	128976029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128971778_128972097_128972239_128972336_128972487_128975194
ES.20060.5	chr2	+	583	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	68	674	-36	-20	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGCCTTCAGTATTGA	3893	False	NA	20	True	AATAAA	-24	NA	128971687	128975380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ES.20060.6	chr2	+	3946	3	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	68	19	-36	-19	intron_retention	FALSE	canonical	3	556	junction_1	69.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTGGAGACCTCCTCC	3893	False	NA	26	True	NA	NA	NA	128971687	128976035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_128971778_128972097_128972239_128972320
ES.20060.8	chr2	+	668	5	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	0	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.587566875264	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGCCTTCAGTATTGA	3929	False	NA	20	True	AATAAA	-24	NA	128971723	128975380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128974774_128974896_128975194
ES.20060.9	chr2	+	1556	5	NNC	ENSMUSG00000037938.5	novel	1325	4	NA	NA	8	3586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	293.44548045591	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATCAAGCTGGCTACC	3937	False	NA	NA	False	AATAAA	-18	NA	128971731	128979640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194_128976192_128979434
ES.20061.1	chr2	-	211	1	ISM	ENSMUSG00000084826.8	ENSMUST00000141786.2	915	2	2172	102	81	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCTAGGAAGCCAATCC	NA	False	NA	NA	False	NA	NA	NA	129020380	129020169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_129020200_129020400
ES.20062.1	chr2	-	162	1	Intergenic	novelGene_16611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129023024	129022862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129022900_129023000
ES.20063.1	chr2	+	3374	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	-58	0	-58	0	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGCTTTTTGTTT	NA	False	NA	22	True	AATAAA	-24	NA	129040625	129053536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.11	chr2	+	6750	10	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	-4	1	intron_retention	FALSE	canonical	3	202	junction_4	149.632966592787	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040716	129053530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.12	chr2	+	6612	9	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	219	junction_1	149.806906966935	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040720	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.13	chr2	+	10048	9	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	194.900254938263	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040720	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129044656_129044692_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.14	chr2	+	3168	12	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	173.558002308419	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040722	129053530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041519_129041621_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.16	chr2	+	3209	11	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_6	201.88521491184	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040722	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046219_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.17	chr2	+	3260	11	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_6	181.851065435427	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129040725	129053530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048399_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.18	chr2	+	3326	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_6	192.505146437592	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040725	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046219_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.19	chr2	+	3258	10	FSM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	-33	-6	-33	-1	multi-exon	FALSE	canonical	3	202	junction_4	145.845428069888	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129041196	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.2	chr2	+	2959	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_8	173.386731550272	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTTCTCTTGTGCT	NA	False	NA	14	True	AATAAA	-16	NA	129040681	129053528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050050_129050400_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.20	chr2	+	5203	8	NNC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	1843	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	229.604540238122	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129043072	129053530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129046076_129046165_129046225_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.21	chr2	+	3299	2	Genic_Genomic	ENSMUSG00000027397.15	novel	3316	11	NA	NA	3207	748	multi-exon	FALSE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGTTAATAACCCTATTT	NA	False	NA	NA	False	ACTAAA	-42	NA	129044436	129047772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_129044653_129044689
ES.20063.22	chr2	+	6339	4	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	-2926	-1	intron_retention	FALSE	canonical	3	499	junction_3	37.1573231902766	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTTCTCTTGTGCT	NA	False	NA	14	True	AATAAA	-16	NA	129045313	129053528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.23	chr2	+	4832	7	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	-2729	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	196.395575872325	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129045510	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129046076_129046165_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.24	chr2	+	3482	3	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	-62	1	intron_retention	FALSE	canonical	3	499	junction_2	1	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTGTGCTTT	NA	False	NA	16	True	AATAAA	-18	NA	129049217	129053530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129049797_129049900_129051877_129052603
ES.20063.25	chr2	+	2855	4	NIC	ENSMUSG00000027397.15	novel	3219	10	NA	NA	69	-1	intron_retention	FALSE	canonical	3	499	junction_3	21.6999743983464	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129049348	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129049797_129049900_129050460_129050960_129051877_129052603
ES.20063.26	chr2	+	3840	1	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	416	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129049695	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129049700_129053500
ES.20063.3	chr2	+	3373	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	9	junction_6	191.197833591932	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040684	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046225_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.4	chr2	+	6558	10	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	19	junction_5	182.523057904109	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040684	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.5	chr2	+	3268	11	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	201.88521491184	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040684	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046240_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.6	chr2	+	10105	8	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	17	-1	intron_retention	FALSE	canonical	3	219	junction_1	151.167699821714	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040700	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.7	chr2	+	5421	11	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	17	1	intron_retention	FALSE	canonical	3	19	junction_5	173.636430509268	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTGCTTTTTGTTTT	NA	False	NA	23	True	AATAAA	-25	NA	129040700	129053537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.8	chr2	+	8945	10	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	17	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	184.475499393668	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040700	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129044656_129044692_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20063.9	chr2	+	3177	10	NIC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_5	186.362516763219	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTGCTTTTTGTT	NA	False	NA	21	True	AATAAA	-23	NA	129040701	129053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ES.20064.1	chr2	-	3165	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-46	-1176	-46	1176	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCAGTTGGGGTTCCC	NA	False	NA	NA	False	NA	NA	NA	129041160	129037995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_129038000_129041200
ES.20064.2	chr2	-	1959	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-20	4	-20	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAATTATTTGTGAGGAA	NA	False	NA	NA	False	ATTAAA	-11	NA	129041134	129039175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_129039200_129041100
ES.20064.3	chr2	-	1540	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-68	471	-68	-471	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGGTTGTAGTTCTGAC	NA	False	NA	NA	False	AATAAA	-26	NA	129041182	129039642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_129039600_129041200
ES.20065.1	chr2	-	3918	5	NNC	ENSMUSG00000087528.2	novel	3362	9	NA	NA	15355	772	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAAGGCCCCCCCTCCC	2810	False	NA	NA	False	NA	NA	NA	129053003	129047105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129049796_129049899_129050457_129050957_129051142_129051789_129051877_129052603
ES.20066.1	chr2	+	2217	5	NNC	ENSMUSG00000056738.12	novel	3431	5	NA	NA	-872	-5967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.89711431702997	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAATGACATAGGTGT	NA	False	NA	NA	False	NA	NA	NA	129060016	129067924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129061319_129063069_129063423_129063507_129063597_129067327_129067517_129067640
ES.20066.2	chr2	+	2138	4	NNC	ENSMUSG00000056738.12	novel	3431	5	NA	NA	-3349	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.68178700572909	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGTAAAGAGGCCTGG	583	False	NA	NA	False	NA	NA	NA	129066592	129075420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129066675_129067327_129067517_129067640_129067816_129073728
ES.20066.3	chr2	+	2105	4	NNC	ENSMUSG00000056738.12	novel	3431	5	NA	NA	-3155	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.68178700572909	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGTAAAGAGGCCTGG	777	False	NA	NA	False	NA	NA	NA	129066786	129075420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129066836_129067327_129067517_129067640_129067816_129073728
ES.20066.4	chr2	+	4168	3	ISM	ENSMUSG00000056738.12	ENSMUST00000143346.8	3431	5	6433	-2	-2620	2	intron_retention	FALSE	canonical	0	0	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGTCTAATTATCTTT	1312	False	NA	NA	False	NA	NA	NA	129067321	129077526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129067517_129067640_129067816_129073728
ES.20066.5	chr2	+	3062	1	Genic_Genomic	ENSMUSG00000056738.12	novel	NA	NA	NA	NA	6057	1536	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAGAAAGAAATC	9989	False	NA	NA	False	NA	NA	NA	129075998	129079060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_129076000_129079100
ES.20067.1	chr2	-	3250	2	NNC	ENSMUSG00000087528.2	novel	2070	3	NA	NA	-196	1304	intron_retention	FALSE	canonical	3	7	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTGTTCATTATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	129068554	129064807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129067831_129068327
ES.20067.2	chr2	-	1914	2	NNC	ENSMUSG00000087528.2	novel	2070	3	NA	NA	-647	-4	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGGATTGTTAAGTGTA	NA	False	NA	NA	False	AATAAA	-10	NA	129069005	129066115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129067831_129068806
ES.20068.1	chr2	-	840	3	NNC	ENSMUSG00000087528.2	novel	2070	3	NA	NA	-17343	-4889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAGAAGACTGAAGACC	NA	False	NA	NA	False	AATAAA	-18	NA	129089842	129071000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129071672_129079616_129079683_129089739
ES.20068.2	chr2	-	2930	1	Intergenic	novelGene_16612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTGGTGTACATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	129082735	129079805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129079800_129082700
ES.20068.3	chr2	-	5989	1	Antisense	novelGene_ENSMUSG00000085485.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAAGCCAGAGATGGT	NA	False	NA	NA	False	NA	NA	NA	129089923	129083934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_129083900_129089900
ES.20068.4	chr2	-	3315	3	Antisense	novelGene_ENSMUSG00000085485.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129089787	129083962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_129087099_129087657_129087789_129089739
ES.20068.5	chr2	-	476	1	Intergenic	novelGene_16613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	129087668	129087192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129087200_129087700
ES.20068.6	chr2	-	1972	1	Antisense	novelGene_ENSMUSG00000085485.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTTTTCCAGGGCCAA	NA	False	NA	NA	False	NA	NA	NA	129090544	129088572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_129088600_129090500
ES.20069.1	chr2	+	176	1	Intergenic	novelGene_16614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129091066	129091242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129091100_129091200
ES.2007.1	chr1	+	2908	1	ISM	ENSMUSG00000026494.13	ENSMUST00000161017.8	13749	15	404991	2177	135678	-2177	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACTATCTTAAATCCAA	NA	False	NA	NA	False	AATAAA	-18	NA	178761680	178764588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_178761700_178764600
ES.20070.1	chr2	-	190	1	Intergenic	novelGene_16615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATGCCTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	129108024	129107834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129107800_129108000
ES.20071.1	chr2	+	188	1	Intergenic	novelGene_16616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACATTTGATAAAGAA	3237	False	NA	NA	False	NA	NA	NA	129133398	129133586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129133400_129133600
ES.20072.1	chr2	-	3140	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	-2	-1	-2	1	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGTTGTTCTCTTT	NA	False	NA	1	True	AATAAA	-21	NA	129139134	129110128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
ES.20072.10	chr2	-	2996	7	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	16	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	137.834139457538	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTCTGCCTGTTGTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	129139116	129110132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129111184_129112494_129112679_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129139024
ES.20072.12	chr2	-	5759	6	NIC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	0	-3356	intron_retention	FALSE	canonical	3	281	junction_2	24.4507668591396	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	129139132	129113485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
ES.20072.3	chr2	-	3200	10	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	132.159835889056	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139074	129110129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132122_129132244_129132877_129132930_129138233_129138301_129139024
ES.20072.5	chr2	-	3020	8	NIC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	49	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	112.562001055563	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	129139083	129110130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129139024
ES.20072.6	chr2	-	2105	1	NIC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	26897	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	129112235	129110130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_129110100_129112200
ES.20072.7	chr2	-	3078	9	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.702565573654	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	129139080	129110130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138239_129138301_129139024
ES.20072.9	chr2	-	2023	6	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.27018650497	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	129139098	129110130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_129111184_129112494_129112909_129127657_129128021_129132877_129132930_129138233_129138301_129139024
ES.20073.1	chr2	+	157	1	Intergenic	novelGene_16617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAAATCTTTGGGGC	NA	False	NA	NA	False	NA	NA	NA	129146034	129146191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129146000_129146200
ES.20074.1	chr2	-	157	1	Intergenic	novelGene_16618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	129257778	129257621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129257600_129257800
ES.20075.1	chr2	+	4498	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	-502	-14	-132	14	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTTTGAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	129434622	129474162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.10	chr2	+	3697	8	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.8506488345544	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434782	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434996_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.11	chr2	+	3776	8	NNC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.8872087940544	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434782	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129434993_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129469849_129469906_129471846
ES.20075.12	chr2	+	2553	9	FSM	ENSMUSG00000037902.19	ENSMUST00000161620.8	3824	9	27	1244	1	387	multi-exon	FALSE	canonical	3	16	junction_8	41.1063787629122	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGCTCTTTGTCATGT	NA	False	NA	NA	False	AAAACA	-12	NA	129434785	129472896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.13	chr2	+	3792	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	28	-8	2	0	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129434786	129474148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.14	chr2	+	3713	9	FSM	ENSMUSG00000037902.19	ENSMUST00000103203.8	3674	9	-47	8	2	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2130131630574	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434786	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129434925_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.15	chr2	+	2539	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	29	1244	3	387	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGCTCTTTGTCATGT	NA	False	NA	NA	False	AAAACA	-12	NA	129434787	129472896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.16	chr2	+	4415	9	NIC	ENSMUSG00000037902.19	novel	3982	8	NA	NA	4	-4	intron_retention	FALSE	canonical	3	6	junction_2	47.2716550905508	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129434788	129474144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129435615_129450052_129450154_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.17	chr2	+	3419	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-499	-2044	-81	0	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129435033	129474148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.18	chr2	+	8332	6	NNC	ENSMUSG00000037902.19	novel	3824	9	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	47.2499735449661	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129435095	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129435615_129451067_129451181_129457366_129457685_129458142_129458479_129460376_129463148_129469865
ES.20075.19	chr2	+	2751	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	-359	1252	1	387	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGCTCTTTGTCATGT	NA	False	NA	NA	False	AAAACA	-12	NA	129435115	129472896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.2	chr2	+	4449	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	-807	2	-87	-2	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTTGGGGGTGTTCCA	NA	False	NA	NA	False	AATAAA	-18	NA	129434667	129474146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.20	chr2	+	3166	5	NNC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	150	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.8203011775348	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129435274	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129435615_129450823_129451181_129460376_129460491_129469844_129469906_129471846
ES.20075.21	chr2	+	3989	9	NNC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	169	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5231903320464	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129435293	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129435615_129450823_129451181_129451316_129451501_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.22	chr2	+	2759	5	FSM	ENSMUSG00000037902.19	ENSMUST00000163034.8	677	5	-159	-1923	-146	0	multi-exon	FALSE	canonical	0	0	junction_1	50.9386886364382	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129435328	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.23	chr2	+	2423	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	211	1348	-139	291	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTATGCTGTTTAGTTG	NA	False	NA	NA	False	NA	NA	NA	129435335	129472800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.24	chr2	+	3597	7	NNC	ENSMUSG00000037902.19	novel	3982	8	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	40.6506115848485	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129435502	129474145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129469844_129469906_129471846
ES.20075.26	chr2	+	3689	9	NIC	ENSMUSG00000037902.19	novel	3824	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	52.3066379630731	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129435522	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129435615_129450052_129450154_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.27	chr2	+	2530	1	Intergenic	novelGene_16619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129445560	129448090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129445600_129448100
ES.20075.28	chr2	+	3487	7	ISM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	15696	8	-11784	0	3prime_fragment	FALSE	canonical	3	100	junction_6	9.50438495292217	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129450820	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.29	chr2	+	3385	5	NNC	ENSMUSG00000037902.19	novel	3982	8	NA	NA	-11757	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	49.1146617620441	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGCCTTGGGGGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	129450847	129474143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129451181_129457366_129457685_129458142_129458479_129460376_129460478_129471846
ES.20075.3	chr2	+	3706	9	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.9934888767546	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129434689	129474148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.30	chr2	+	3268	6	NNC	ENSMUSG00000037902.19	novel	3824	9	NA	NA	-11556	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.7741248115311	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129451048	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129469843_129469918_129471846
ES.20075.31	chr2	+	4660	4	ISM	ENSMUSG00000037902.19	ENSMUST00000099113.10	3342	6	23095	-8	-4395	0	3prime_fragment	FALSE	canonical	3	16	junction_3	50.6052259049289	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129458209	129474148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.32	chr2	+	4060	3	ISM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	26301	4	-1179	-4	3prime_fragment	FALSE	canonical	3	100	junction_2	14	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTTGGGGGTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	129461425	129474144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129463148_129469865_129469906_129471846
ES.20075.4	chr2	+	3759	10	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.5317765318078	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434729	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434813_129435523_129435615_129450052_129450154_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.5	chr2	+	3551	8	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.8506488345544	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129434750	129474145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434813_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.6	chr2	+	3637	9	NIC	ENSMUSG00000037902.19	novel	3824	9	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	41.1063787629122	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAATGCCTTGGGGGTG	NA	False	NA	NA	False	AATAAA	-13	NA	129434763	129474141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ES.20075.7	chr2	+	3158	7	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	43.9229122693637	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129434763	129474145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434996_129435523_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.8	chr2	+	2960	7	NIC	ENSMUSG00000037902.19	novel	3812	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	43.9229122693637	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434773	129474140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_129434813_129435523_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20075.9	chr2	+	4085	8	NNC	ENSMUSG00000037902.19	novel	3982	8	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_1	40.8506488345544	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTTGGGGGTGTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	129434774	129474145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129435615_129451067_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ES.20076.1	chr2	+	160	1	Intergenic	novelGene_16620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	3196	False	NA	NA	False	NA	NA	NA	129591469	129591629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129591500_129591600
ES.20077.1	chr2	+	6389	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-194	-3313	-194	0	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6037	False	NA	34	True	AATAAA	-41	NA	129642242	129674207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ES.20077.10	chr2	+	1160	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-29	4314	-29	-1001	multi-exon	FALSE	canonical	3	29	junction_2	55	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTACACTCTGGACAGG	6202	False	NA	NA	False	ATTAAA	-24	NA	129642407	129669893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129669693
ES.20077.11	chr2	+	4360	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-24	1109	-24	-1109	multi-exon	FALSE	canonical	3	29	junction_2	55	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAATCTTATTCCAAG	6207	False	NA	NA	False	AATAAA	-13	NA	129642412	129673098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129669693
ES.20077.12	chr2	+	4087	15	Fusion	ENSMUSG00000027401.10_ENSMUSG00000037885.19	novel	2882	4	NA	NA	106	-1509	multi-exon	FALSE	canonical	0	0	junction_3	46.5812873000587	225	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACCACCAGTTCCAACCG	6337	False	NA	NA	False	AATAAA	-20	NA	129642542	129890810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_129642767_129643323_129643925_129652407_129653158_129764625_129764751_129865608_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
ES.20077.13	chr2	+	6416	3	ISM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	336	-3313	336	0	3prime_fragment	FALSE	canonical	3	112	junction_2	10	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6567	False	NA	34	True	AATAAA	-41	NA	129642772	129674207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129643925_129652407_129653158_129669693
ES.20077.14	chr2	+	5195	3	NNC	ENSMUSG00000037885.19	novel	2882	4	NA	NA	605	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCATACGCTATTTG	6836	False	NA	10	True	AATAAA	-17	NA	129643041	129674183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129643146_129643323_129643925_129669693
ES.20077.15	chr2	+	7810	2	ISM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	7425	-3313	7425	0	3prime_fragment	FALSE	canonical	3	112	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	NA	False	NA	34	True	AATAAA	-41	NA	129649861	129674207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_129653158_129669693
ES.20077.16	chr2	+	2205	1	Intergenic	novelGene_16622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACACCTGACTCTAAA	NA	False	NA	NA	False	NA	NA	NA	129774127	129776332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_129774100_129776300
ES.20077.17	chr2	+	2683	13	FSM	ENSMUSG00000027401.10	ENSMUST00000110299.3	4135	13	-50	1502	-50	-1502	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCCAACCGGCTGCTT	NA	False	NA	NA	False	AATAAA	-27	NA	129854218	129890817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129854330_129865608_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871544_129871723_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
ES.20077.2	chr2	+	5610	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	-165	0	-165	0	multi-exon	FALSE	canonical	3	29	junction_2	55	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6066	False	NA	34	True	AATAAA	-41	NA	129642271	129674207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129669693
ES.20077.3	chr2	+	2128	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-159	913	-159	-913	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATATAGTCACTGTTAA	6072	False	NA	NA	False	NA	NA	NA	129642277	129669981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ES.20077.4	chr2	+	2233	4	NNC	ENSMUSG00000037885.19	novel	2882	4	NA	NA	-139	34640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.9392072379868	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCAGACGTTGGTGGCA	6092	False	NA	NA	False	NA	NA	NA	129642297	129708847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129642767_129643323_129643925_129652407_129653158_129708434
ES.20077.5	chr2	+	5997	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-45	-3070	-45	-243	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCCTTTTTTTTT	6186	False	NA	NA	False	TTTAAA	-38	NA	129642391	129673964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ES.20077.6	chr2	+	5858	4	NNC	ENSMUSG00000037885.19	novel	2882	4	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.0880557621119	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6191	False	NA	34	True	AATAAA	-41	NA	129642396	129674207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129642477_129643410_129643925_129652407_129653158_129669693
ES.20077.7	chr2	+	5130	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-36	-2212	-36	-1101	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTATTCCAAGAAGAGGAA	6195	False	NA	NA	False	AATAAA	-21	NA	129642400	129673106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ES.20077.8	chr2	+	4235	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	-34	-1319	-34	1319	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTTAACGTTTGTCC	6197	False	NA	NA	False	NA	NA	NA	129642402	129672213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ES.20077.9	chr2	+	5981	6	NNC	ENSMUSG00000037885.19	novel	2882	4	NA	NA	-30	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.1683465036089	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCATACGCTATTTG	6201	False	NA	10	True	AATAAA	-17	NA	129642406	129674183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693_129672261_129672417_129673050_129673112
ES.20078.1	chr2	-	3153	1	Antisense	novelGene_ENSMUSG00000037885.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGACTTGCTTAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	129643439	129640286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_129640300_129643400
ES.20079.1	chr2	-	9909	1	Antisense	novelGene_ENSMUSG00000037885.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTAACTAGTATTTGA	NA	False	NA	NA	False	NA	NA	NA	129683875	129673966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_129674000_129683900
ES.2008.1	chr1	-	874	2	NNC	ENSMUSG00000055067.16	novel	693	3	NA	NA	30598	435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGGAACTCTGGCCTCC	NA	False	NA	NA	False	AATACA	-22	NA	178786312	178784379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_178785128_178786186
ES.2008.2	chr1	-	190	1	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	560594	5291	31905	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGACTTGGCTTTGCC	NA	False	NA	-6	True	AATAAA	-25	NA	178785005	178784815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_178784800_178785000
ES.20080.1	chr2	-	177	1	Intergenic	novelGene_16621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCCACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	129685573	129685396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_129685400_129685600
ES.20081.1	chr2	-	896	4	ISM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	5682	-207	5414	207	3prime_fragment	TRUE	canonical	3	3806	junction_3	84.8685257717292	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAAGTGAAAATGCTCT	NA	False	NA	NA	False	AATAAA	-27	NA	130015641	130013347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526
ES.20081.10	chr2	-	3120	5	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	-9	intron_retention	FALSE	canonical	3	3295	junction_3	301.86959104885	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTGATATATTCATTT	NA	False	NA	-20	True	AATAAA	-19	NA	130021286	130013563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015680_130017249_130019087_130021153
ES.20081.11	chr2	-	961	6	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1487.13367253922	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021286	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015095_130017249_130017362_130018934_130019087_130021153
ES.20081.12	chr2	-	3181	6	ISM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	37	10	-32	-10	intron_retention	FALSE	canonical	3	3295	junction_4	259.626192823452	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021286	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934
ES.20081.13	chr2	-	1686	7	NIC	ENSMUSG00000027404.17	novel	1133	8	NA	NA	21	-10	intron_retention	FALSE	canonical	3	49	junction_5	1704.13276249893	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021302	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ES.20081.14	chr2	-	2529	4	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	20	-10	intron_retention	FALSE	canonical	3	3295	junction_1	73.440830302738	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021303	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130015680_130017249_130017362_130018934_130019087_130021153
ES.20081.15	chr2	-	1505	7	NIC	ENSMUSG00000027404.17	novel	1133	8	NA	NA	8	-10	intron_retention	FALSE	canonical	3	49	junction_5	1675.42161360457	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021246	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ES.20081.16	chr2	-	2951	5	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	11	-10	intron_retention	FALSE	canonical	3	3295	junction_3	248.24836353942	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021243	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015095_130015526_130015680_130017249_130019087_130021153
ES.20081.17	chr2	-	3387	4	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	7	-10	intron_retention	FALSE	canonical	3	3295	junction_2	243.242448780818	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021247	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015680_130017249_130019087_130021153
ES.20081.18	chr2	-	4218	5	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	7	-10	intron_retention	FALSE	canonical	3	3369	junction_4	234.801378829001	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTGATATATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	130021247	130013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130019087_130021153
ES.20081.19	chr2	-	2685	6	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	-12	intron_retention	FALSE	canonical	3	3295	junction_4	279.281506727531	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACAGTTGATATATTCA	NA	False	NA	-23	True	AATAAA	-16	NA	130021286	130013566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130019087_130021153
ES.20081.2	chr2	-	5163	4	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	9	8	intron_retention	FALSE	canonical	3	3295	junction_3	302.987715189173	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTCTGAGTGCCTAA	NA	False	NA	-3	True	AATAAA	-36	NA	130021245	130013546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015680_130017249
ES.20081.21	chr2	-	1506	6	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	6	-12	intron_retention	FALSE	canonical	3	3295	junction_3	276.893770244114	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACAGTTGATATATTCA	NA	False	NA	-23	True	AATAAA	-16	NA	130021248	130013566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015680_130017249_130017362_130018934_130019087_130021153
ES.20081.22	chr2	-	3248	7	ISM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	92	-140	23	-12	intron_retention	FALSE	canonical	3	49	junction_6	1751.17684239295	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACAGTTGATATATTCA	NA	False	NA	-23	True	AATAAA	-16	NA	130021231	130013566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934
ES.20081.23	chr2	-	5487	3	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	-32	-16	intron_retention	FALSE	canonical	3	3295	junction_2	274.5	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACATACAGTTGATATA	NA	False	NA	-27	True	AATAAA	-12	NA	130021286	130013570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015680_130017249
ES.20081.3	chr2	-	1265	8	NNC	ENSMUSG00000027404.17	novel	1133	8	NA	NA	-451	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1294.20029677143	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTTCTGAGTGCCTA	NA	False	NA	-4	True	AATAAA	-35	NA	130021774	130013547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153_130021329_130021682
ES.20081.4	chr2	-	3896	4	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	3295	junction_2	228.604947939064	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTCATTTGTCTTCTG	NA	False	NA	-12	True	AATAAA	-27	NA	130021253	130013555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015680_130017249_130017362_130018934
ES.20081.5	chr2	-	1534	8	NIC	ENSMUSG00000027404.17	novel	1133	8	NA	NA	-23	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	1843.40162499126	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGATATATTCATTTGTC	NA	False	NA	-17	True	AATAAA	-22	NA	130021078	130013560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130020653
ES.20081.6	chr2	-	1241	8	NNC	ENSMUSG00000027404.17	novel	1133	8	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1676.74007088342	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGATATATTCATTTGTC	NA	False	NA	-17	True	AATAAA	-22	NA	130021261	130013560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130019959_130020108_130021153
ES.20081.7	chr2	-	1162	7	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	225	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	1392.95832273937	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGATATATTCATTTGTC	NA	False	NA	-17	True	AATAAA	-22	NA	130020830	130013560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130020653
ES.20081.8	chr2	-	1384	6	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	7	-8	intron_retention	FALSE	canonical	3	3295	junction_3	225.940346109322	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGATATATTCATTTG	NA	False	NA	-19	True	AATAAA	-20	NA	130021247	130013562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130013864_130014522_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ES.20081.9	chr2	-	1263	8	FSM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	14	-144	14	-8	multi-exon	FALSE	canonical	3	49	junction_6	1649.031750539	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGATATATTCATTTG	NA	False	NA	-19	True	AATAAA	-20	NA	130021309	130013562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ES.20082.1	chr2	-	4972	1	Intergenic	novelGene_16623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCATTGGTTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	130116014	130111042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130111000_130116000
ES.20083.1	chr2	+	1938	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-56	-5	-56	5	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTATTGACTAT	NA	False	NA	36	True	AATAAA	-25	NA	130116293	130121238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.10	chr2	+	4882	1	FSM	ENSMUSG00000065287.3	ENSMUST00000083353.3	133	1	-1812	-2937	-1812	2937	mono-exon	FALSE	NA	NA	NA	NA	NA	1196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116344	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130116300_130121200
ES.20083.100	chr2	+	1750	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	691.209910588576	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117701_130117937_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.101	chr2	+	2352	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_8	213.833673681205	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.103	chr2	+	1859	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	703.559944170589	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119897_130120075_130120211_130120816
ES.20083.104	chr2	+	3033	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	207.851772604902	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116365	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119891_130120075
ES.20083.105	chr2	+	3212	8	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	7	0	-1	intron_retention	FALSE	canonical	3	1993	junction_1	221.970856700806	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116365	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951
ES.20083.106	chr2	+	3052	8	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	-56	intron_retention	FALSE	canonical	3	433	junction_7	726.86191597714	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCAGAAAGCACAGGAG	NA	False	NA	-85	True	AAAAAG	-5	NA	130116365	130121117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120332
ES.20083.107	chr2	+	1746	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	115	0	-55	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCAGAAAGCACAGGAGG	NA	False	NA	-84	True	AAAAAG	-6	NA	130116365	130121118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.109	chr2	+	4043	4	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	310.241124861865	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116365	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582_130117745_130117895
ES.20083.11	chr2	+	2364	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116345	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.110	chr2	+	3320	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1876	junction_5	305.624315495712	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116365	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119545_130119768_130119891_130120075
ES.20083.111	chr2	+	3419	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	234.867811521479	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119891_130120075
ES.20083.112	chr2	+	3197	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	433	junction_7	727.292322556054	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.114	chr2	+	2135	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	945.36081809481	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAAAACACAAAACCAG	NA	False	NA	5	True	GATAAA	-5	NA	130116366	130121207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.116	chr2	+	2241	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	8	intron_retention	FALSE	canonical	3	132	junction_8	700.376470192996	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116366	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119891_130120075_130120211_130120816
ES.20083.12	chr2	+	3014	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	433	junction_8	680.271901062362	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116345	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119891_130120075_130120211_130120332
ES.20083.120	chr2	+	2445	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	2	8	intron_retention	FALSE	canonical	3	1876	junction_7	266.789213378277	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116367	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130120211_130120816
ES.20083.121	chr2	+	2348	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	4	8	intron_retention	FALSE	canonical	3	1876	junction_7	249.822653145569	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116369	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.123	chr2	+	2294	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	4	8	intron_retention	FALSE	canonical	3	83	junction_11	835.502441994344	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116369	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.127	chr2	+	4015	3	NIC	ENSMUSG00000027405.17	novel	3627	5	NA	NA	14	0	intron_retention	FALSE	canonical	3	2502	junction_1	82.5	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116388	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116644_130116951_130117067_130117582
ES.20083.128	chr2	+	1945	11	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	6	8	intron_retention	FALSE	canonical	0	0	junction_9	736.991478919533	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116417	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119895_130120075_130120211_130120816
ES.20083.129	chr2	+	3116	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	141	11	intron_retention	FALSE	canonical	3	433	junction_6	782.472026479044	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACAAAACCAGATAG	NA	False	NA	9	True	GATAAA	-9	NA	130116552	130121211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120332
ES.20083.13	chr2	+	2110	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-2	8	intron_retention	FALSE	canonical	3	1876	junction_7	251.875532655749	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116347	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.130	chr2	+	2255	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-149	8	intron_retention	FALSE	canonical	3	25	junction_4	841.226995015529	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116601	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116644_130116951_130117745_130117895_130118095_130118355_130118779_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.131	chr2	+	2080	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	35	-2	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	731.406255859978	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116785	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.133	chr2	+	3816	2	FSM	ENSMUSG00000080610.3_ENSMUSG00000065272.3_ENSMUSG00000093645.3_ENSMUSG00000027405.17	ENSMUST00000160183.2	320	2	-474	-3022	-184	8	multi-exon	FALSE	canonical	3	2634	junction_1	0	1193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130117241	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130117745_130117895
ES.20083.135	chr2	+	2001	7	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-144	8	intron_retention	FALSE	canonical	2	75	junction_6	808.699040984277	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130117934	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120079
ES.20083.136	chr2	+	2223	5	ISM	ENSMUSG00000065287.3_ENSMUSG00000027405.17	ENSMUST00000146454.9	1490	6	-576	-35	-18	8	intron_retention	FALSE	canonical	3	1876	junction_3	194.3000257334	1191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130118060	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075
ES.20083.137	chr2	+	1596	8	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-63	8	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_7	884.180653809745	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130118156	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.138	chr2	+	1702	6	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-62	8	intron_retention	FALSE	canonical	3	132	junction_2	849.273430645278	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130118157	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.139	chr2	+	1840	7	Fusion	ENSMUSG00000065287.3_ENSMUSG00000027405.17	novel	1005	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	83	junction_6	993.047288232875	1191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130118157	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.14	chr2	+	3126	8	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	842.916317535345	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116347	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117584_130117745_130117895_130118095_130118355_130118779_130118951_130119891_130120075
ES.20083.140	chr2	+	1619	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-62	8	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	804.665855426269	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130118157	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.141	chr2	+	1757	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_7	1007.63590768143	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130118157	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.143	chr2	+	2084	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-60	-7	intron_retention	FALSE	canonical	3	132	junction_3	931.68284124302	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATGATAAAACCCCAAT	NA	False	NA	-11	True	NA	NA	NA	130118159	130121191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.145	chr2	+	1489	6	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	54	8	intron_retention	FALSE	canonical	3	1876	junction_3	194.005566930436	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130118448	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.146	chr2	+	967	6	NNC	ENSMUSG00000027405.17	novel	1490	6	NA	NA	-58	-56	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_5	938.077821931635	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCAGAAAGCACAGGAG	NA	False	NA	-85	True	AAAAAG	-5	NA	130118950	130121117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.15	chr2	+	1935	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_8	241.9110580358	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116349	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.17	chr2	+	2521	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	208.815670808012	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116349	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119891_130120075_130120211_130120816
ES.20083.18	chr2	+	2034	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	672.651113625152	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116349	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.2	chr2	+	2553	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-37	8	intron_retention	FALSE	canonical	0	0	junction_8	852.573227023941	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116312	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119397_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.21	chr2	+	3709	5	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	2	8	intron_retention	FALSE	canonical	3	2205	junction_4	182.24845678359	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116351	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118779_130118951
ES.20083.23	chr2	+	2295	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	1876	junction_7	253.395508939321	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116351	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.26	chr2	+	2250	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	44	junction_6	805.63863448509	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116351	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130119395_130119545_130119768_130119891_130120075
ES.20083.27	chr2	+	4202	3	NIC	ENSMUSG00000027405.17	novel	3627	5	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1993	junction_1	337	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116351	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582
ES.20083.28	chr2	+	2295	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	2	8	intron_retention	FALSE	canonical	3	48	junction_6	805.488050811432	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116351	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951_130119891_130120075_130120211_130120816
ES.20083.29	chr2	+	3744	5	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	2	6	2	0	intron_retention	FALSE	canonical	3	1993	junction_1	270.413572144595	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116351	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895
ES.20083.3	chr2	+	2216	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-24	8	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_8	932.387511833048	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116325	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.31	chr2	+	2226	11	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	4	7	intron_retention	FALSE	canonical	3	48	junction_6	1007.23792621207	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAAAACACAAAACCAG	NA	False	NA	5	True	GATAAA	-5	NA	130116353	130121207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.33	chr2	+	3552	6	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1993	junction_1	242.270097205578	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTATTTTGTTTA	NA	False	NA	28	True	AATAAA	-17	NA	130116361	130121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119891_130120075
ES.20083.35	chr2	+	2350	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	897.222002803124	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116364	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120206_130120332_130120491_130120816
ES.20083.38	chr2	+	2019	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116364	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.39	chr2	+	1692	11	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	708.688761022778	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116364	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116614_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.40	chr2	+	2921	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	8	intron_retention	FALSE	canonical	3	1993	junction_1	225.275695291101	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116364	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119891_130120075_130120211_130120816
ES.20083.41	chr2	+	3252	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	433	junction_7	715.06032284425	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116364	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.42	chr2	+	2684	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1993	junction_1	211.243548385966	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116364	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120816
ES.20083.43	chr2	+	3437	6	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	1993	junction_1	224.046959363433	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116364	130121228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130118095_130118355_130119891_130120075
ES.20083.44	chr2	+	2663	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	433	junction_10	618.436253788537	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.45	chr2	+	3702	5	NNC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	4	intron_retention	FALSE	canonical	2	75	junction_4	1031.62793074829	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTGTTTATTGACTA	NA	False	NA	35	True	AATAAA	-24	NA	130116365	130121237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130119891_130120079
ES.20083.47	chr2	+	2919	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	433	junction_8	685.43995907738	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.48	chr2	+	2757	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-8	intron_retention	FALSE	canonical	3	433	junction_9	646.991289272941	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGATAGTATGTGTG	NA	False	NA	17	True	AATAAA	-6	NA	130116365	130121219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.49	chr2	+	2556	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	0	0	junction_8	852.573227023941	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119289_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.5	chr2	+	2926	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	1876	junction_7	268.766511120712	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116331	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075
ES.20083.50	chr2	+	3095	7	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	48	junction_6	913.898015827441	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTATTTTGTTTAT	NA	False	NA	29	True	AATAAA	-18	NA	130116365	130121231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951
ES.20083.51	chr2	+	1982	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTTTGTTTATTGAC	NA	False	NA	33	True	AATAAA	-22	NA	130116365	130121235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.52	chr2	+	1834	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	703.559944170589	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119895_130120081_130120211_130120816
ES.20083.53	chr2	+	3256	5	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	249.795291188605	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130120211_130120816
ES.20083.54	chr2	+	2542	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1876	junction_8	254.977897855994	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075
ES.20083.55	chr2	+	2707	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	132	junction_7	734.963944693888	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075
ES.20083.56	chr2	+	1755	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	735.37190590884	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGTATTTTGTT	NA	False	NA	26	True	AATAAA	-15	NA	130116365	130121228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.57	chr2	+	1987	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	948.840549770555	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118381_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.58	chr2	+	2958	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_7	264.886650286495	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130119545_130119768_130119891_130120075
ES.20083.59	chr2	+	2593	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1993	junction_1	198.045725465106	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130119891_130120075_130120211_130120816
ES.20083.6	chr2	+	3316	7	FSM	ENSMUSG00000027405.17	ENSMUST00000161543.2	2960	7	-34	-322	-18	-2	multi-exon	FALSE	canonical	3	1993	junction_1	225.275695291101	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116331	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075
ES.20083.61	chr2	+	2747	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	222.057723696027	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118779_130118951_130119891_130120075_130120211_130120816
ES.20083.62	chr2	+	2454	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_6	264.829662235936	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.63	chr2	+	2883	8	NNC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	8	intron_retention	FALSE	canonical	2	48	junction_6	1087.74036517949	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951_130119891_130120079
ES.20083.64	chr2	+	2037	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	7	intron_retention	FALSE	canonical	3	83	junction_11	830.399883756103	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAAAACACAAAACCAG	NA	False	NA	5	True	GATAAA	-5	NA	130116365	130121207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.65	chr2	+	2422	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_10	614.848566721921	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ES.20083.67	chr2	+	2257	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	1	21	junction_8	1078.17000606744	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119235_130119395_130119545_130119770_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.68	chr2	+	3834	5	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	268.781509780714	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582_130117745_130117895_130119891_130120075
ES.20083.70	chr2	+	2785	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_8	253.734964281168	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075
ES.20083.72	chr2	+	1801	11	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	1007.89701854902	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTATTGACTAT	NA	False	NA	36	True	AATAAA	-25	NA	130116365	130121238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
ES.20083.73	chr2	+	4710	2	ISM	ENSMUSG00000027405.17	ENSMUST00000150745.9	3627	5	2	0	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	0	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATTTTGTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	130116365	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553
ES.20083.77	chr2	+	3707	5	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1993	junction_1	260.669690412982	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116365	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130118779_130118951
ES.20083.78	chr2	+	3467	6	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	16	8	0	-2	intron_retention	FALSE	canonical	3	1993	junction_1	246.739214556584	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355
ES.20083.79	chr2	+	3742	5	NIC	ENSMUSG00000027405.17	novel	2960	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1993	junction_1	241.123801189348	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTATGTGTGTATTTTG	NA	False	NA	24	True	AATAAA	-13	NA	130116365	130121226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117067_130117582_130118095_130118355_130119891_130120075
ES.20083.8	chr2	+	1352	10	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-16	1332	-16	22	5prime_fragment	FALSE	canonical	3	1876	junction_9	253.467849277347	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTAGCTGAGT	NA	False	NA	NA	False	NA	NA	NA	130116333	130119901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768
ES.20083.80	chr2	+	2322	10	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	89	junction_2	741.284087759499	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130117032_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119891_130120075_130120211_130120816
ES.20083.82	chr2	+	2180	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_7	254.977897855994	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.84	chr2	+	3483	6	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	206.229968724238	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120816
ES.20083.85	chr2	+	3668	5	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	226.728223871665	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130117745_130117895_130118095_130118355_130120211_130120816
ES.20083.86	chr2	+	2403	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	196.926946409632	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119891_130120075_130120211_130120816
ES.20083.88	chr2	+	2696	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_5	283.045536107186	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.89	chr2	+	3041	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1876	junction_6	283.045536107186	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075
ES.20083.9	chr2	+	3913	4	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	-16	6	-16	0	intron_retention	FALSE	canonical	3	1993	junction_1	286.856913615288	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116333	130121227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582
ES.20083.91	chr2	+	3277	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	239.648353495978	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951
ES.20083.92	chr2	+	2571	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	83	junction_9	906.490669192647	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	False	NA	23	True	AATAAA	-12	NA	130116365	130121225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
ES.20083.93	chr2	+	3353	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	1993	junction_1	238.146138606809	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118779_130118951_130119891_130120075
ES.20083.94	chr2	+	2404	10	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	non_canonical	0	0	junction_3	985.794334096013	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117581_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119897_130120081_130120211_130120816
ES.20083.95	chr2	+	2292	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	0	0	junction_5	1013.40904095904	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118381_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119770_130119891_130120075_130120211_130120332
ES.20083.96	chr2	+	1613	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	764.283897869901	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ES.20083.98	chr2	+	2338	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	706.512316164808	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120204_130120332
ES.20083.99	chr2	+	2057	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	8	intron_retention	FALSE	canonical	3	48	junction_6	763.095903556487	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACACAAAACCAGA	NA	False	NA	6	True	GATAAA	-6	NA	130116365	130121208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951_130119545_130119768_130119891_130120075_130120211_130120816
ES.20084.1	chr2	-	1516	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	99	1	13	-1	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTTTGTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	130126368	130121229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.11	chr2	-	3825	10	NIC	ENSMUSG00000027406.14	novel	1233	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	745	junction_5	52.9914971050271	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTATCTGGTTTTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	130126348	130121236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.13	chr2	-	1379	13	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-5	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	228.117050850849	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAATACACACATACT	NA	False	NA	NA	False	CATAAA	-33	NA	130126340	130121249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121358_130121446_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.14	chr2	-	1344	13	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.117050850849	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126353	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121358_130121479_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.15	chr2	-	3139	12	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-9	-28	intron_retention	FALSE	canonical	3	31	junction_1	228.990021075299	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126344	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121358_130121475_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.16	chr2	-	1030	10	NIC	ENSMUSG00000027406.14	novel	1233	12	NA	NA	-8	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	254.629626936027	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126362	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121358_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.17	chr2	-	1441	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	1	-28	intron_retention	FALSE	canonical	2	3	junction_8	311.959920078745	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126353	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123662_130123767_130123829_130125624_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.18	chr2	-	4061	8	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	9	-28	intron_retention	FALSE	canonical	3	745	junction_4	50.2585153714964	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126345	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130126169_130126301
ES.20084.19	chr2	-	3677	10	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-6	-28	intron_retention	FALSE	canonical	3	745	junction_5	53.9958846168442	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126360	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.2	chr2	-	3511	9	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	745	junction_5	42.5962146205505	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTTTTGTGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	130126365	130121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123461_130123557_130123691_130123767_130125957_130126090_130126169_130126301
ES.20084.20	chr2	-	4583	6	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	1	-28	intron_retention	FALSE	canonical	3	745	junction_2	56	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126353	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130126169_130126301
ES.20084.21	chr2	-	4147	7	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-5	-28	intron_retention	FALSE	canonical	3	745	junction_3	51.6752681012236	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126340	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130122472_130122875_130123023_130123132_130123461_130123557_130123691_130123767_130125750_130125857_130126169_130126301
ES.20084.22	chr2	-	1379	13	NNC	ENSMUSG00000027406.14	novel	1233	12	NA	NA	-7	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	297.694194322518	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126361	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121358_130121475_130121670_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.23	chr2	-	4005	7	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	1	-28	intron_retention	FALSE	canonical	3	745	junction_3	53.3572862878164	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126353	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130123461_130123557_130123691_130123767_130125750_130125857_130126169_130126301
ES.20084.25	chr2	-	1870	11	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	1	-28	intron_retention	FALSE	canonical	3	745	junction_5	51.4984465785134	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130126353	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.27	chr2	-	3182	5	ISM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	838	36	706	-28	intron_retention	FALSE	canonical	3	750	junction_4	45.1137451338281	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTCAATAAACA	NA	False	NA	NA	False	CATAAA	-18	NA	130125629	130121264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132
ES.20084.3	chr2	-	1498	12	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	237.388581955778	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTTTTGTGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	130126359	130121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122883_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.4	chr2	-	2059	11	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	5	-2	intron_retention	FALSE	canonical	3	745	junction_5	50.444523984274	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTTTTGTGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	130126376	130121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.5	chr2	-	3442	10	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	745	junction_6	52.4456214557187	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTTTTGTGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	130126361	130121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130126169_130126301
ES.20084.6	chr2	-	4085	8	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-7	1	intron_retention	FALSE	canonical	3	745	junction_5	41.4137904666589	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGGTTTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	130126361	130121231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130126169_130126301
ES.20084.7	chr2	-	1223	12	FSM	ENSMUSG00000027406.14	ENSMUST00000239288.2	1233	12	14	-4	-13	0	multi-exon	FALSE	canonical	3	48	junction_1	222.733469301557	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATCTGGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	130126367	130121232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.8	chr2	-	1476	14	NNC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	341.831232797672	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTATCTGGTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	130126340	130121234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130121358_130121446_130121647_130121881_130121964_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ES.20084.9	chr2	-	3334	11	NIC	ENSMUSG00000027406.14	novel	1616	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	745	junction_6	51.2441216140935	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTATCTGGTTTTGTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	130126391	130121234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130125750_130125857_130125957_130126090_130126169_130126301
ES.20085.1	chr2	+	9316	11	NIC	ENSMUSG00000053552.15	novel	2670	17	NA	NA	7437	397	intron_retention	FALSE	canonical	0	0	junction_2	1.85472369909914	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGCCTATTCACCCA	NA	False	NA	NA	False	TTTAAA	-40	NA	130145295	130212798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130148485_130148720_130148785_130148918_130148975_130150472_130150547_130151592_130151662_130200694_130200777_130201488_130201607_130201690_130202051_130203537_130207578_130211357_130211434_130211610
ES.20086.1	chr2	-	2435	13	NNC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-30	0	intron_retention	FALSE	canonical	1	1	junction_5	47.7431641412907	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239524	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235866_130235951_130236149_130236273_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.10	chr2	-	2588	12	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-56	0	intron_retention	FALSE	canonical	3	131	junction_6	20.0156963199773	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239550	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.11	chr2	-	2525	12	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	131	junction_6	20.097284056466	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239489	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235866_130235951_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.12	chr2	-	4265	12	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	131	junction_6	18.9710523283839	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTCTTGAGTTCCTAT	NA	False	NA	-5	True	ATTAAA	-17	NA	130239492	130232696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.13	chr2	-	2562	13	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	131	junction_7	18.1659021245849	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCCTCTTGAGTTCCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	130239520	130232697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.14	chr2	-	5135	7	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	41	-2	intron_retention	FALSE	canonical	3	152	junction_4	16.1184849026066	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCCTCTTGAGTTCCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	130239453	130232697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130236354_130236656_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.15	chr2	-	2345	14	NNC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.5246641975869	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCCTCTTGAGTTCCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	130239494	130232697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235584_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.16	chr2	-	3441	8	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	5	-2	intron_retention	FALSE	canonical	3	152	junction_5	15.2395832606795	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCCTCTTGAGTTCCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	130239489	130232697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130236354_130236656_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.17	chr2	-	2500	11	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-33	-4	intron_retention	FALSE	canonical	1	1	junction_6	52.0865625665584	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTCCTCTTGAGTTCC	NA	False	NA	-8	True	ATTAAA	-14	NA	130239527	130232699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.18	chr2	-	1832	11	ISM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-8	2540	-8	-2539	5prime_fragment	FALSE	canonical	3	131	junction_5	14.4968962195361	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTTTACTGTCAATCC	NA	False	NA	NA	False	NA	NA	NA	130239502	130235234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.2	chr2	-	4090	13	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	131	junction_7	19.4243547011363	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239489	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.4	chr2	-	2720	11	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	131	junction_5	19.6746029184835	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239506	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.5	chr2	-	3746	7	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	152	junction_4	15.7867736482862	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239489	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.6	chr2	-	2387	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	-22	1	-22	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239516	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.7	chr2	-	2534	11	NNC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_4	52.5105703644514	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239517	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130233063_130233157_130233261_130234990_130235602_130235685_130236152_130236648_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.8	chr2	-	2675	12	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	-53	0	intron_retention	FALSE	canonical	3	131	junction_6	18.9736659610103	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239547	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20086.9	chr2	-	2919	13	NIC	ENSMUSG00000027408.8	novel	2366	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	131	junction_8	17.9249980629164	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCTTGAGTTCCTATT	NA	False	NA	-4	True	ATTAAA	-18	NA	130239485	130232695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ES.20087.1	chr2	+	168	1	Intergenic	novelGene_16624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATCTCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	130255869	130256037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130255900_130256000
ES.20088.1	chr2	+	4260	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-504	-2	intron_retention	FALSE	canonical	3	154	junction_13	58.6865401944943	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130265754	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130285320_130285433
ES.20088.11	chr2	+	3112	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_14	89.4489239734051	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266259	130285651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.12	chr2	+	2716	25	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.849485516458	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266259	130285654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130266537_130266603_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.13	chr2	+	2914	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	151.447076373725	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266259	130285654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280908_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282624_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285100_130285320_130285433
ES.20088.15	chr2	+	2751	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	114.718601098586	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266265	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282622_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.16	chr2	+	3298	19	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	9	-8	intron_retention	FALSE	canonical	0	0	junction_7	163.196021268978	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGAATAGTTGTTGTAT	NA	False	NA	13	True	AATAAA	-13	NA	130266267	130285646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280976_130281355_130281446_130281523_130281635_130281760_130281838_130282150_130282283_130282371_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130284254_130284425_130284506_130285320_130285433
ES.20088.17	chr2	+	2827	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	9	-9	intron_retention	FALSE	canonical	0	0	junction_14	87.4865976130331	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266267	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.18	chr2	+	2498	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_12	138.109838534407	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266269	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280751_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.19	chr2	+	529	2	NNC	ENSMUSG00000027411.18	novel	653	4	NA	NA	11	-13405	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATTGGTCAGCCTACAT	NA	False	NA	NA	False	TATAAA	-25	NA	130266269	130266968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130266537
ES.20088.2	chr2	+	2748	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	-122	535	-96	0	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266162	130285654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.20	chr2	+	3083	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-13	-4	intron_retention	FALSE	canonical	0	0	junction_14	89.0417879425161	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266271	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.21	chr2	+	3897	16	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-13	-6	intron_retention	FALSE	canonical	0	0	junction_10	100.698096638748	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266271	130285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281635_130281760_130281838_130282150_130282663_130282819_130282929_130283084_130283424_130283527_130283626_130283713_130284171_130284254_130284425_130284506_130284604_130285215
ES.20088.22	chr2	+	2839	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_14	113.649453791505	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266273	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285100_130285320_130285433
ES.20088.24	chr2	+	2679	24	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.139613200375	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266273	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279486_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.25	chr2	+	2749	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-11	-9	intron_retention	FALSE	canonical	0	0	junction_6	114.836112110381	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266273	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280670_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.26	chr2	+	2816	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_13	87.0597053191052	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266274	130285651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.27	chr2	+	2981	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	327	junction_9	31.0713292280842	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266274	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.28	chr2	+	3053	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-6	intron_retention	FALSE	canonical	0	0	junction_13	87.4230727599622	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266274	130285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.3	chr2	+	2758	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266239	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.30	chr2	+	3215	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-9	intron_retention	FALSE	canonical	0	0	junction_13	87.8598884588411	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266274	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215
ES.20088.32	chr2	+	2625	24	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107.960872979603	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266274	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.33	chr2	+	2970	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-6	intron_retention	FALSE	canonical	3	327	junction_9	30.8737752793532	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266274	130285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.34	chr2	+	2841	22	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-4	intron_retention	FALSE	canonical	2	2	junction_4	97.9033259112774	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266274	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280230_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.35	chr2	+	2908	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_13	89.4489239734051	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266274	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.36	chr2	+	1502	1	NIC	ENSMUSG00000027411.18	novel	653	4	NA	NA	-10	-12597	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGAAGACTTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	130266274	130267776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266300_130267800
ES.20088.37	chr2	+	3116	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	154	junction_14	59.1256289607138	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266276	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283626_130283713_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.38	chr2	+	2853	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-8	-4	intron_retention	FALSE	canonical	1	2	junction_2	94.7333469523451	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266276	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279720_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.39	chr2	+	2474	24	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	112.315835396917	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266276	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282174_130282418_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.4	chr2	+	2681	25	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-17	20223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	130.120557080732	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAACTTCTTACCTCT	NA	False	NA	NA	False	AAAACA	-5	NA	130266241	130306412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280148_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433_130285653_130306400
ES.20088.40	chr2	+	2703	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-2	-6	intron_retention	FALSE	canonical	0	0	junction_14	85.3381823798751	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266282	130285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.41	chr2	+	2855	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	-10	intron_retention	FALSE	canonical	2	32	junction_15	93.1323394587574	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCAGAATAGTTGTTGT	NA	False	NA	11	True	AATAAA	-11	NA	130266285	130285644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.42	chr2	+	3693	18	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	-4	intron_retention	FALSE	canonical	3	327	junction_8	32.6764573516148	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266285	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281446_130281539_130281635_130281760_130281838_130282150_130282663_130282819_130283424_130283527_130283626_130283713_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.43	chr2	+	3190	19	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	1	-6	intron_retention	FALSE	canonical	3	327	junction_9	31.7337009782625	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAGTTGTTGTATGC	NA	False	NA	15	True	AATAAA	-15	NA	130266285	130285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282663_130282819_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.45	chr2	+	4076	16	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	131.628669622794	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266295	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282622_130282663_130282819_130283424_130283527_130284171_130284254_130284425_130284506_130285320_130285433
ES.20088.46	chr2	+	2714	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	12	-9	intron_retention	FALSE	canonical	3	154	junction_14	56.5337060288406	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266296	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.47	chr2	+	2167	18	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_7	129.624851306085	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266296	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280751_130282418_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.48	chr2	+	3069	21	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_13	117.198752126463	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266296	130285651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285100
ES.20088.49	chr2	+	2486	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112.310115232205	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTTGTATGCTGT	NA	False	NA	18	True	AATAAA	-18	NA	130266299	130285651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130280040_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.5	chr2	+	2802	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	85.5022110776882	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	NA	False	NA	17	True	AATAAA	-17	NA	130266244	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.50	chr2	+	2925	21	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_13	89.6177995712905	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266305	130285654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282663_130282819_130282929_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.51	chr2	+	2772	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-16	-9	intron_retention	FALSE	canonical	0	0	junction_13	112.934271414234	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266307	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.53	chr2	+	6111	1	Intergenic	novelGene_16625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130271257	130277368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130271300_130277400
ES.20088.54	chr2	+	2895	20	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	289	-4	intron_retention	FALSE	canonical	0	0	junction_4	121.180801712157	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	2146	False	NA	17	True	AATAAA	-17	NA	130279844	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280670_130280826_130280965_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.55	chr2	+	2368	20	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	354	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.561582527636	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCAGAATAGTTGTTGT	2211	False	NA	11	True	AATAAA	-11	NA	130279909	130285644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280976_130281355_130281446_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.56	chr2	+	2147	20	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	729	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	136.208614645334	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	2586	False	NA	19	True	AATAAA	-19	NA	130280284	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282272_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.57	chr2	+	1898	18	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-801	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	148.021367577507	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGTTGTTGTATGCTG	3050	False	NA	17	True	AATAAA	-17	NA	130280748	130285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281767_130281838_130282150_130282272_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.58	chr2	+	1731	11	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-93	-9	intron_retention	FALSE	canonical	3	154	junction_3	76.3649788843027	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	4450	False	NA	12	True	AATAAA	-12	NA	130282148	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.6	chr2	+	2924	23	NNC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-14	-2	intron_retention	FALSE	canonical	0	0	junction_15	113.381058659769	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGTTGTATGCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	130266244	130285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282272_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.60	chr2	+	180	1	Intergenic	novelGene_16626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAAGA	8958	False	NA	NA	False	NA	NA	NA	130286656	130286836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130286700_130286800
ES.20088.61	chr2	+	2960	1	Intergenic	novelGene_16627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAGTCAAAAGCAG	9323	False	NA	NA	False	NA	NA	NA	130287021	130289981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130287000_130290000
ES.20088.62	chr2	+	1963	1	Intergenic	novelGene_16628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAACAAA	NA	False	NA	NA	False	AAGAAA	-7	NA	130288796	130290759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130288800_130290800
ES.20088.63	chr2	+	3254	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	-27	2098	-27	3	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGTCCCTTTGTCTTGG	NA	False	NA	15	True	AATAAA	-23	NA	130292170	130395946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.65	chr2	+	3327	21	NNC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.1778854412245	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATATCGGTCCCTTTG	NA	False	NA	9	True	AATAAA	-17	NA	130292197	130395940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382296_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.66	chr2	+	2918	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	1	2406	1	-305	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGATTGTTCCTTGCTTC	NA	False	NA	32	True	AATGAA	-21	NA	130292198	130395638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.67	chr2	+	2980	22	NNC	ENSMUSG00000027303.19	novel	3066	22	NA	NA	5	-312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.8469003776494	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGCCAGATTGTTCC	NA	False	NA	25	True	ATTAAA	-43	NA	130292202	130395631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130377419_130377493_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.69	chr2	+	4948	3	ISM	ENSMUSG00000027303.19	ENSMUST00000230981.2	1386	12	-19	31130	5	-24797	5prime_fragment	FALSE	canonical	3	221	junction_2	2	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATATTTGGTAGTGTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	130292202	130350506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130292479_130345393_130345473_130345913
ES.20088.71	chr2	+	5381	20	NIC	ENSMUSG00000027303.19	novel	3066	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	182	junction_13	23.0213678894497	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGTCCCTTTGTCT	NA	False	NA	12	True	AATAAA	-20	NA	130292202	130395943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.72	chr2	+	2818	21	NNC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	5	-390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	52.9375811687689	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTCCTTTTCCAGTGTT	NA	False	NA	-53	True	NA	NA	NA	130292202	130395553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384366_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.73	chr2	+	1158	7	NNC	ENSMUSG00000027303.19	novel	1386	12	NA	NA	6	-4636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.757092794584	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACCAGACCAAAACT	NA	False	NA	NA	False	AGTAAA	-9	NA	130292203	130370667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130370501
ES.20088.74	chr2	+	2881	20	NNC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	9	-324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	54.5712576423232	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGCCTGGAAACTGGG	NA	False	NA	13	True	ATTAAA	-31	NA	130292206	130395619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130379444_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.75	chr2	+	4718	23	NNC	ENSMUSG00000027303.19	novel	3066	22	NA	NA	10	2153	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_22	77.2052646686868	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGGTTCAGCA	NA	False	NA	NA	False	NA	NA	NA	130292207	130400197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313_130395392_130398168
ES.20088.76	chr2	+	3030	23	NNC	ENSMUSG00000027303.19	novel	3066	22	NA	NA	10	-309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.9320053473921	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGATTGTTCCTTG	NA	False	NA	28	True	AATGAA	-17	NA	130292207	130395634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130340034_130340133_130345393_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.77	chr2	+	3011	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	10	2304	10	-203	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTTGAGGAAATGGTT	NA	False	NA	134	True	ACTAAA	-20	NA	130292207	130395740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.78	chr2	+	3492	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	10	1823	10	278	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCGGAGTTGTATTTAT	NA	False	NA	NA	False	TTTAAA	-4	NA	130292207	130396221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.79	chr2	+	3292	20	NNC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	10	3	intron_retention	TRUE	canonical	0	0	junction_12	54.4602322571886	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGGTCCCTTTGTCTTGG	NA	False	NA	15	True	AATAAA	-23	NA	130292207	130395946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383219_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391763_130394116_130394253_130395313
ES.20088.8	chr2	+	2899	22	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	-5	-9	intron_retention	FALSE	canonical	3	327	junction_9	30.3973683071413	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAATAGTTGTTGTA	NA	False	NA	12	True	AATAAA	-12	NA	130266253	130285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ES.20088.80	chr2	+	2995	22	NNC	ENSMUSG00000027303.19	novel	3066	22	NA	NA	12	-312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.6900099018588	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGCCAGATTGTTCC	NA	False	NA	25	True	ATTAAA	-43	NA	130292209	130395631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130369125_130369221_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.82	chr2	+	3327	20	NIC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	28	-296	intron_retention	FALSE	canonical	3	182	junction_14	23.0260601489569	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGCTTCAAATATCTT	NA	False	NA	41	True	AATGAA	-30	NA	130292249	130395647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.83	chr2	+	177	1	Intergenic	novelGene_16629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	130316537	130316714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130316500_130316700
ES.20088.84	chr2	+	1190	1	FSM	ENSMUSG00000027303.19	ENSMUST00000230491.2	2954	1	2341	-577	1882	151	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGGAAA	5584	False	NA	NA	False	NA	NA	NA	130376931	130378121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130376900_130378100
ES.20088.85	chr2	+	4413	11	NIC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	-3496	-304	intron_retention	FALSE	canonical	3	182	junction_4	28.3726981445191	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATTGTTCCTTGCTTCA	7413	False	NA	33	True	AATGAA	-22	NA	130378760	130395639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.87	chr2	+	720	4	ISM	ENSMUSG00000027303.19	ENSMUST00000077303.4	3066	22	98938	327	4949	-327	3prime_fragment	FALSE	canonical	3	232	junction_1	24.2257897474755	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTCAGCCTGGAAACT	NA	False	NA	10	True	ATTAAA	-28	NA	130391401	130395616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130391531_130391610_130391763_130394116_130394253_130395313
ES.20088.88	chr2	+	3795	1	Genic_Genomic	ENSMUSG00000027303.19	novel	NA	NA	NA	NA	9960	2163	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCAGCAGGTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	130396412	130400207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_130396400_130400200
ES.20088.9	chr2	+	5466	42	Fusion	ENSMUSG00000027303.19_ENSMUSG00000027411.18	novel	3161	24	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_14	105.08321962048	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCGGTCCCTTTGTCT	NA	False	NA	12	True	AATAAA	-20	NA	130266255	130395943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ES.20089.1	chr2	-	3435	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.2719239859361	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACAATTGAAGAGTTTA	8024	False	NA	NA	False	AATAAA	-19	NA	130266231	130259605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130261254_130261549_130261629_130263560_130263652_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
ES.20089.10	chr2	-	1909	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	11.0250179323284	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACATTCCTGTGTCGGG	8065	False	NA	-4	True	AATAAA	-16	NA	130266190	130260885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130265768
ES.20089.12	chr2	-	1841	7	NNC	ENSMUSG00000037773.15	novel	3496	7	NA	NA	158	2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	11.6045967903528	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACATTCCTGTGTCG	8245	False	NA	-6	True	AATAAA	-14	NA	130266010	130260887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130261254_130261549_130261629_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
ES.20089.13	chr2	-	3374	2	NNC	ENSMUSG00000037773.15	novel	2243	3	NA	NA	1	1030	intron_retention	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAGGCTAGTGTGATGC	8026	False	NA	NA	False	AATAAA	-15	NA	130266229	130262779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130263338_130263413
ES.20089.2	chr2	-	3335	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	-8	169	-5	-169	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTCTGTGTTCTTAAT	8049	False	NA	NA	False	NA	NA	NA	130266206	130259771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
ES.20089.3	chr2	-	5790	2	ISM	ENSMUSG00000037773.15	ENSMUST00000142536.2	2243	3	236	-3693	174	4	intron_retention	FALSE	canonical	3	37	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAAGAATTTTGATAATT	8261	False	NA	NA	False	ATTAAA	-42	NA	130265994	130260116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130264057_130264144
ES.20089.5	chr2	-	2691	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	11.0250179323284	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTTTGGTTTGTT	8025	False	NA	NA	False	ATTAAA	-15	NA	130266230	130260143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130265768
ES.20089.6	chr2	-	3078	6	FSM	ENSMUSG00000037773.15	ENSMUST00000153663.8	3032	6	-45	-1	-1	1	multi-exon	FALSE	canonical	3	20	junction_5	6.96850055607374	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTTTGGTTTGTT	8024	False	NA	NA	False	ATTAAA	-15	NA	130266231	130260143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264625_130264732_130264813_130265331
ES.20089.7	chr2	-	2458	8	FSM	ENSMUSG00000037773.15	ENSMUST00000110277.2	1689	8	-34	-735	-20	1	multi-exon	FALSE	canonical	0	0	junction_7	13.0868371321129	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTTTGGTTTGTT	7614	False	NA	NA	False	ATTAAA	-15	NA	130266641	130260143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130266412
ES.20089.8	chr2	-	2088	8	NNC	ENSMUSG00000037773.15	novel	1689	8	NA	NA	2	166	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	11.0250179323284	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAACAGTTCTTTGGGAC	8059	False	NA	NA	False	AATAAA	-22	NA	130266196	130260712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130265768
ES.2009.1	chr1	-	7058	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	178898214	178891156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_178891200_178898200
ES.20090.1	chr2	-	173	1	Intergenic	novelGene_16630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130329424	130329251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130329300_130329400
ES.20091.1	chr2	-	4243	1	Intergenic	novelGene_16631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACCAAACAAAAATTATAT	NA	False	NA	NA	False	NA	NA	NA	130336704	130332461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130332500_130336700
ES.20092.1	chr2	-	448	3	Antisense	novelGene_ENSMUSG00000115955.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTCTTTCTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	130366412	130360798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_130360962_130361348_130361555_130366333
ES.20093.1	chr2	+	1013	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	-14	3279	-14	22	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACAGTGCTAATGAAAG	371	False	NA	36	True	NA	NA	NA	130405647	130407336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ES.20093.2	chr2	+	1060	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	543	junction_1	21	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGCCCATTTACTGGC	381	False	NA	13	True	NA	NA	NA	130405657	130407313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130405911_130406000_130406352_130406857
ES.20093.3	chr2	+	4065	5	NNC	ENSMUSG00000037740.9	novel	4278	4	NA	NA	-4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	237.497894727511	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTTGCTTTTTTGTTG	381	False	NA	NA	False	AATAAA	-13	NA	130405657	130410614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857_130409302_130409517
ES.20093.4	chr2	+	4144	4	NNC	ENSMUSG00000037740.9	novel	4278	4	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	266.424473350329	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTTGCTTTTTTGTTG	382	False	NA	NA	False	AATAAA	-13	NA	130405658	130410614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130405911_130406000_130406352_130406857_130409302_130409517
ES.20093.5	chr2	+	3248	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	11	-2202	11	-1099	multi-exon	FALSE	canonical	3	543	junction_1	21	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAAAGATGACATCAG	396	False	NA	NA	False	NA	NA	NA	130405672	130409516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130405911_130406000_130406352_130406857
ES.20093.6	chr2	+	3791	1	NIC	ENSMUSG00000037740.9	novel	4278	4	NA	NA	64	-1099	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAAAGATGACATCAG	449	False	NA	NA	False	NA	NA	NA	130405725	130409516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130405700_130409500
ES.20094.1	chr2	+	4333	2	Intergenic	novelGene_16632	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAGTCTAGACAATGCTT	5498	False	NA	NA	False	AAAACA	-3	NA	130412016	130416390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130412908_130412948
ES.20095.1	chr2	-	7455	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	44	3632	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGATTACTTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	130471903	130428289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.10	chr2	-	2544	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1323	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCTCCTAGCACACAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	130471947	130433244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.11	chr2	-	7785	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	37	-1328	intron_retention	FALSE	canonical	3	113	junction_4	32.6398529408452	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471910	130433249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.12	chr2	-	2392	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	9	1330	-2	-1330	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471949	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20095.13	chr2	-	2152	5	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	27	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.8425612145145	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471920	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444504_130471835
ES.20095.14	chr2	-	1840	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	1	-1330	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	61.7566910454963	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471946	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130441936_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.15	chr2	-	2355	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	23	-1330	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	70.3903402463719	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471924	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.16	chr2	-	2440	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	12	-1330	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	63.6649214420486	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471935	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20095.17	chr2	-	2578	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	21	-1330	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471926	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.18	chr2	-	2658	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	3	-1330	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	59.4810894318522	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471944	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471411_130471536_130471835
ES.20095.19	chr2	-	2515	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	20	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.374987304488	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471927	130433251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130451272_130451418_130471835
ES.20095.2	chr2	-	3715	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	22	-6	11	6	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATTTCTCATTAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	130471936	130431915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20095.20	chr2	-	4371	9	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	21	-1331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	79.9717723637534	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAGGATTCCTCCTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	130471926	130433252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442603_130444470_130444573_130446404_130446547_130456808_130458626_130470408_130470556_130471835
ES.20095.21	chr2	-	2312	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	-1	-1567	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCCCTCACTGGTCAG	NA	False	NA	NA	False	NA	NA	NA	130471959	130433488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.22	chr2	-	2330	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	26	-1573	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGCCAGCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	130471921	130433494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.23	chr2	-	2147	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	11	1573	0	-1573	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGCCAGCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	130471947	130433494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20095.24	chr2	-	2144	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	44	-1573	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	64.251242962469	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGCCAGCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	130471903	130433494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446510_130446547_130470408_130470556_130471835
ES.20095.25	chr2	-	2174	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	33	-1722	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGGGCTTGAATA	NA	False	NA	NA	False	NA	NA	NA	130471914	130433643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.26	chr2	-	3864	5	ISM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	31	5119	20	4664	5prime_fragment	FALSE	canonical	3	59	junction_4	40.1333714008679	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCGTGTATGTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	130471927	130437040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20095.27	chr2	-	3872	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	22	4527	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_4	32.6398529408452	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTGGAGCCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	130471925	130437177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.28	chr2	-	3914	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	22	774	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGCTTGTGAGAAT	NA	False	NA	NA	False	CATAAA	-12	NA	130471925	130454985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130470408_130470556_130471835
ES.20095.29	chr2	-	3875	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	21	771	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTGGTGCTTGTGAG	NA	False	NA	NA	False	CATAAA	-9	NA	130471926	130454988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130470408_130470556_130471835
ES.20095.3	chr2	-	3857	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	15	5	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTATTTCTCATTAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	130471932	130431916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.30	chr2	-	4629	1	FSM	ENSMUSG00000079043.4	ENSMUST00000179273.2	2424	1	-1792	-413	-1792	8	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTGCATTTTTTTTT	NA	False	NA	3	True	AATAAA	-33	NA	130460380	130455751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130455800_130460400
ES.20095.31	chr2	-	3181	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	-11	8	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_1	74	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTGCATTTTTTTTT	NA	False	NA	3	True	AATAAA	-33	NA	130471958	130455751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130470408_130470556_130471835
ES.20095.32	chr2	-	4387	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	21	3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTCTTACTGCATTTT	NA	False	NA	-2	True	AATAAA	-28	NA	130471926	130455756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130470408
ES.20095.33	chr2	-	3211	4	NNC	ENSMUSG00000027300.11	novel	3131	5	NA	NA	21	-14058	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	100.174292554971	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAAAGTCTTACTG	NA	False	NA	-8	True	AATAAA	-22	NA	130471926	130455762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130459198_130459309_130470408_130470556_130471835
ES.20095.34	chr2	-	3134	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	92.5	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAAAGTCTTACTG	NA	False	NA	-8	True	AATAAA	-22	NA	130471959	130455762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130470408_130470556_130471835
ES.20095.35	chr2	-	3015	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	-6	6	-6	-6	multi-exon	FALSE	canonical	3	43	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	-11	True	AATAAA	-19	NA	130471953	130455765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130458663_130471835
ES.20095.36	chr2	-	3192	4	NNC	ENSMUSG00000027300.11	novel	3131	5	NA	NA	24	-14061	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	98.5269280732712	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGATCCACAAAGTCTTA	NA	False	NA	-11	True	AATAAA	-19	NA	130471923	130455765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130459198_130459259_130470408_130470556_130471835
ES.20095.37	chr2	-	2943	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGATCCACAAAGTCTT	NA	False	NA	-12	True	AATAAA	-18	NA	130471919	130455766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130471835
ES.20095.38	chr2	-	3514	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	7	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGATCCACAAAGTCTT	NA	False	NA	-12	True	AATAAA	-18	NA	130471919	130455766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458626_130470408_130470556_130471411
ES.20095.39	chr2	-	3080	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTGATCCACAAAGTCT	NA	False	NA	-13	True	AATAAA	-17	NA	130471960	130455767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130459198_130459259_130471835
ES.20095.4	chr2	-	3987	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.6112506475709	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTATTTCTCATTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	130471914	130431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130451268_130451418_130470408_130470556_130471835
ES.20095.40	chr2	-	3242	4	NNC	ENSMUSG00000027300.11	novel	3131	5	NA	NA	21	-14064	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	99.2516442628982	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTGATCCACAAAGTC	NA	False	NA	-14	True	AATAAA	-16	NA	130471926	130455768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130459198_130459309_130470408_130470556_130471835
ES.20095.41	chr2	-	3548	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	29	-9	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	25.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTGATCCACAAAGTC	NA	False	NA	-14	True	AATAAA	-16	NA	130471918	130455768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130470408_130470556_130471411
ES.20095.42	chr2	-	3318	5	NNC	ENSMUSG00000027300.11	novel	3131	5	NA	NA	15	-14068	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	4.38748219369606	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGACATTGATCCACAA	NA	False	NA	-18	True	AATAAA	-12	NA	130471932	130455772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458663_130459198_130459259_130470408_130470556_130471411_130471536_130471835
ES.20095.43	chr2	-	2566	3	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGACATTGATCCACAA	NA	False	NA	-18	True	AATAAA	-12	NA	130471953	130455772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130458014_130458418_130458626_130471835
ES.20095.44	chr2	-	146	1	Intergenic	novelGene_16633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	130462127	130461981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130462000_130462100
ES.20095.45	chr2	-	1609	2	NNC	ENSMUSG00000079043.4	novel	3015	2	NA	NA	23	-12871	at_least_one_novel_splicesite	FALSE	canonical	3	214	junction_1	0	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGGAAGGGGACAAAG	NA	False	NA	NA	False	NA	NA	NA	130471924	130469035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130470556_130471835
ES.20095.46	chr2	-	2928	1	Genic_Genomic	ENSMUSG00000027300.11_ENSMUSG00000079043.4	novel	NA	NA	NA	NA	-5	-12871	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGGAAGGGGACAAAG	NA	False	NA	NA	False	NA	NA	NA	130471963	130469035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_130469000_130472000
ES.20095.6	chr2	-	3705	6	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	70.3903402463719	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGACATTTATTTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	130471946	130431923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.7	chr2	-	2984	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	10	-873	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCCTATTGGCTTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130471937	130432794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
ES.20095.8	chr2	-	3108	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	24	-880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.6112506475709	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTGATTGCCTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	130471923	130432801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130451272_130451418_130470408_130470556_130471835
ES.20095.9	chr2	-	2819	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	30	882	19	-882	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAAATTGATTGCCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	130471928	130432803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ES.20096.1	chr2	-	4957	12	Fusion	ENSMUSG00000037703.15_ENSMUSG00000068290.12	novel	893	6	NA	NA	43	67	multi-exon	FALSE	canonical	0	0	junction_4	189.936048393502	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTGGCCAGCCTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	130506536	130474691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_130477385_130477755_130478548_130478862_130479340_130479804_130479968_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.10	chr2	-	3200	7	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	53	1	intron_retention	FALSE	canonical	3	158	junction_6	90.4353667298118	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	-3	True	ATTAAA	-17	NA	130506526	130495953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503985
ES.20096.11	chr2	-	6260	6	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_5	161.866117516916	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	-3	True	ATTAAA	-17	NA	130506540	130495953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130496243_130496581_130496631_130497105_130500259_130500508_130500632_130503656_130503759_130503996
ES.20096.12	chr2	-	1111	9	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.411607995608	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	-3	True	ATTAAA	-17	NA	130506529	130495953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503753_130503993_130504110_130505267_130505475_130506394
ES.20096.13	chr2	-	944	8	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	310	0	at_least_one_novel_splicesite	FALSE	canonical	3	158	junction_6	84.7042875333393	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130505429	130495954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503985_130504110_130505267
ES.20096.14	chr2	-	1987	8	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_6	174.01466041922	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506488	130495954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504105_130505267
ES.20096.15	chr2	-	5068	7	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	72	0	intron_retention	FALSE	canonical	0	0	junction_5	150.009351560346	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506507	130495954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130496243_130496581_130496631_130497105_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267
ES.20096.16	chr2	-	1085	8	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	60	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.920603412014	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTGTTTGTAG	NA	False	NA	-5	True	ATTAAA	-15	NA	130506519	130495955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130497073_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.17	chr2	-	6277	6	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	31	-1	intron_retention	FALSE	canonical	3	158	junction_5	99.0280768267263	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTGTTTGTAG	NA	False	NA	-5	True	ATTAAA	-15	NA	130506548	130495955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130500259_130500508_130500632_130503656_130503759_130503985
ES.20096.18	chr2	-	4906	7	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	453	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	190.494458945369	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTGTTTGTAG	NA	False	NA	-5	True	ATTAAA	-15	NA	130505286	130495955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497330_130497427_130500259_130500508_130500632_130503656_130503759_130503996
ES.20096.19	chr2	-	4126	8	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	60	-2	intron_retention	FALSE	canonical	0	0	junction_5	138.556552957076	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCTTGTTGTTTGTA	NA	False	NA	-6	True	ATTAAA	-14	NA	130506519	130495956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.2	chr2	-	3855	5	NNC	ENSMUSG00000037703.15	novel	4201	5	NA	NA	10	66	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3.20156211871642	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCTGTGGCCAGCCTGT	4027	False	NA	NA	False	AATAAA	-23	NA	130484713	130474692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130477385_130477755_130478548_130479204_130479340_130479804_130479968_130484640
ES.20096.21	chr2	-	1109	9	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	-24	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	170.964497411012	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGCTGAGCTTGTTGT	NA	False	NA	-11	True	ATTAAA	-9	NA	130506109	130495961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130505971
ES.20096.3	chr2	-	4910	12	Fusion	ENSMUSG00000037703.15_ENSMUSG00000068290.12	novel	893	6	NA	NA	85	0	multi-exon	FALSE	non_canonical	0	0	junction_4	189.838382763465	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGGAAAGAGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	130506494	130474758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_130477385_130477692_130478548_130478862_130479340_130479804_130479968_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503997_130504110_130505267_130505475_130506394
ES.20096.4	chr2	-	4224	5	FSM	ENSMUSG00000037703.15	ENSMUST00000045761.7	4201	5	-20	-3	-20	0	multi-exon	FALSE	canonical	2	6	junction_3	1.87082869338697	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGGAAAGAGTTTTCA	3997	False	NA	NA	False	NA	NA	NA	130484743	130474758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130477385_130477692_130478548_130478862_130479340_130479804_130479968_130484640
ES.20096.5	chr2	-	4212	5	NNC	ENSMUSG00000037703.15	novel	4201	5	NA	NA	-73	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	1.92028643696715	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGATGGAAAGAGTTTT	3944	False	NA	NA	False	NA	NA	NA	130484796	130474760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130477385_130477755_130478548_130478862_130479340_130479804_130479968_130484640
ES.20096.6	chr2	-	2919	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	60	-1741	60	1741	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAATAGTAAGTAGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	130506519	130494138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.7	chr2	-	1206	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	30	2	30	-2	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGTGCCAGAAGTCCCA	NA	False	NA	69	True	AATAAA	-16	NA	130506549	130495881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.8	chr2	-	1284	10	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	86	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	185.910239857708	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTTGTAGAAGACC	NA	False	NA	1	True	ATTAAA	-21	NA	130506493	130495949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130497750_130497953_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ES.20096.9	chr2	-	950	9	NNC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	169.681134779327	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTGTTGTTTGTAGAA	NA	False	NA	-3	True	ATTAAA	-17	NA	130506522	130495953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505424_130505475_130506394
ES.20097.1	chr2	+	1207	8	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	176.270084975139	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	5427	False	NA	17	True	AATAAA	-17	NA	130509721	130523533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130509866_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ES.20097.2	chr2	+	1196	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	193	1	-2	-1	multi-exon	FALSE	canonical	3	338	junction_5	87.1842992792643	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	5428	False	NA	17	True	AATAAA	-17	NA	130509722	130523533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ES.20097.3	chr2	+	2755	7	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	193	3	-2	-3	intron_retention	FALSE	canonical	3	338	junction_5	67.2154496129176	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGTCTGTCTTGAG	5428	False	NA	15	True	AATAAA	-15	NA	130509722	130523531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254
ES.20097.4	chr2	+	6348	6	FSM	ENSMUSG00000074797.12	ENSMUST00000156382.8	747	6	-2	-5599	-2	0	multi-exon	FALSE	canonical	3	338	junction_5	71.8888030224457	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5428	False	NA	18	True	AATAAA	-18	NA	130509722	130523534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548
ES.20097.5	chr2	+	4860	6	NIC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	338	junction_4	97.5036409576586	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	5451	False	NA	17	True	AATAAA	-17	NA	130509745	130523533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130509856_130513320_130513541_130513979_130514054_130516158_130516191_130517548_130521332_130522892
ES.20097.6	chr2	+	3102	8	NNC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.033687401254	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5465	False	NA	18	True	AATAAA	-18	NA	130509759	130523534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130511798_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ES.20097.7	chr2	+	6566	5	NIC	ENSMUSG00000074797.12	novel	1390	8	NA	NA	1722	1	intron_retention	FALSE	canonical	3	338	junction_3	105.770979006531	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGTCTTGAGTTTC	7212	False	NA	19	True	AATAAA	-19	NA	130511506	130523535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130513541_130513979_130514054_130516158_130516191_130517548_130521332_130522892
ES.20098.1	chr2	-	3150	2	Antisense	novelGene_ENSMUSG00000074797.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACTTATGTGTATGTA	NA	False	NA	NA	False	NA	NA	NA	130519281	130514773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_130516185_130517542
ES.20099.1	chr2	-	3267	22	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-468	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	30.3292589025553	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCCTCCCTGGTACTCC	NA	False	NA	5	True	AATAAA	-28	NA	130539907	130526026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278_130539388_130539790
ES.20099.11	chr2	-	5099	11	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	78	junction_10	26.6422596639249	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539394	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130527776_130527950_130528878_130529078_130529609_130529706_130529801_130529873_130530078_130532752_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.12	chr2	-	3554	18	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	23	junction_17	29.203023970071	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539394	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.13	chr2	-	3041	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.14	chr2	-	3327	20	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	1	junction_7	31.2425060266536	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528315_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.15	chr2	-	3176	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	3	junction_15	32.0017360640186	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533701_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.16	chr2	-	3640	16	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	3	junction_10	39.1218040938241	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529609_130529706_130530003_130532752_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.17	chr2	-	3307	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	76	junction_6	22.7096542259394	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.18	chr2	-	3821	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	78	junction_18	21.9320640182078	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528878_130529078_130529212_130529290_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.19	chr2	-	4296	19	ISM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	46	1	-4	-1	intron_retention	FALSE	canonical	3	76	junction_7	21.8383511338863	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960
ES.20099.2	chr2	-	5546	15	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-491	0	intron_retention	FALSE	canonical	3	82	junction_9	22.9235642062566	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539930	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528878_130529078_130529405_130529482_130529609_130529706_130530078_130532752_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567
ES.20099.20	chr2	-	3204	21	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	36.6080592219801	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538410_130538574_130539278
ES.20099.21	chr2	-	3256	20	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_9	38.1261210724779	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539393	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528315_130528803_130528878_130529078_130529212_130529361_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.22	chr2	-	3276	20	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_18	37.5175674456115	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539392	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538410_130538574_130539278
ES.20099.24	chr2	-	3345	20	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	114	-1	intron_retention	FALSE	canonical	0	0	junction_19	31.4767645033779	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	False	NA	-2	True	AATAAA	-21	NA	130539275	130526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539037
ES.20099.25	chr2	-	2928	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	36.1969918946619	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCAGTCGCCCTCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	130539395	130526034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.26	chr2	-	3583	19	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	1	junction_5	32.4075608461976	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCAGTCGCCCTCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	130539393	130526034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527513_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.28	chr2	-	3546	18	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	23	junction_17	29.2328676943132	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130539394	130526035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.29	chr2	-	5064	14	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-52	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	37.4856185440915	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130539491	130526035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527321_130527414_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130533392_130533468_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.3	chr2	-	4402	16	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-3	0	intron_retention	FALSE	canonical	3	78	junction_15	18.8554737116013	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539392	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.30	chr2	-	3119	10	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	259	-3	intron_retention	FALSE	canonical	3	82	junction_8	26.0640237364328	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130530226	130526035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527584_130527668_130527776_130527950_130528878_130529078_130529212_130529290_130529609_130529706_130529801_130529873
ES.20099.31	chr2	-	5167	12	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-6	-3	intron_retention	FALSE	canonical	2	2	junction_7	35.5732279313327	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130539395	130526035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528878_130529078_130529212_130529482_130529609_130529706_130530078_130532752_130534251_130537960_130538676_130539278
ES.20099.32	chr2	-	4296	16	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-6	-3	intron_retention	FALSE	canonical	0	0	junction_14	41.5266447262745	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGCAGTCGCCCTCCC	NA	False	NA	-4	True	AATAAA	-19	NA	130539395	130526035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527584_130527668_130527776_130527950_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130530078_130532752_130532877_130533309_130533392_130533468_130534251_130537960_130538024_130538410_130538574_130539278
ES.20099.33	chr2	-	2940	4	NIC	ENSMUSG00000074796.11	novel	2861	10	NA	NA	1025	-4	intron_retention	FALSE	canonical	3	98	junction_2	22.3954360429878	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGCAGTCGCCCTCC	NA	False	NA	-5	True	AATAAA	-18	NA	130529460	130526036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130527776_130527950_130528878_130529078
ES.20099.34	chr2	-	4750	14	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	78	junction_13	24.2118363151472	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGCAGTCGCCCTCC	NA	False	NA	-5	True	AATAAA	-18	NA	130539393	130526036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527776_130527950_130528878_130529078_130529609_130529706_130529801_130529873_130530078_130532752_130533392_130533468_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.35	chr2	-	1603	11	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-5	-561	intron_retention	FALSE	canonical	3	23	junction_10	24.3647286050963	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGAGATGTGGGTCTG	NA	False	NA	NA	False	NA	NA	NA	130539394	130529057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
ES.20099.4	chr2	-	3590	18	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	669	0	intron_retention	FALSE	canonical	3	76	junction_7	22.862913260741	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130538720	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567
ES.20099.5	chr2	-	2995	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	36.1015371924011	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539396	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130534085_130534251_130537960_130538024_130539278
ES.20099.7	chr2	-	3078	21	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	30.5983659694435	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539393	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530006_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.20099.8	chr2	-	3063	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_16	32.0864957556375	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539393	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130537960_130538024_130538567_130538676_130539278
ES.20099.9	chr2	-	4362	17	NNC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_4	33.1549393002008	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539393	130526032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130526424_130526531_130526702_130526777_130527325_130527414_130527513_130527668_130527776_130527950_130528878_130529078_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ES.201.1	chr1	-	2388	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTGTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	24775276	24772888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_24772900_24775300
ES.2010.1	chr1	+	2059	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGTCTGAGGCTATAAG	NA	False	NA	NA	False	NA	NA	NA	178964957	178967016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_178965000_178967000
ES.20100.1	chr2	+	155	1	Intergenic	novelGene_16634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	8564	False	NA	NA	False	NA	NA	NA	130598040	130598195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130598000_130598200
ES.20101.1	chr2	+	175	1	Intergenic	novelGene_16636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	130603386	130603561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130603400_130603600
ES.20102.1	chr2	+	170	1	Intergenic	novelGene_16638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130646161	130646331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130646200_130646300
ES.20103.1	chr2	+	180	1	Intergenic	novelGene_16641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTGAGACA	8623	False	NA	NA	False	NA	NA	NA	130676442	130676622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130676400_130676600
ES.20104.1	chr2	+	299	1	Intergenic	novelGene_16642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	130678376	130678675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130678400_130678700
ES.20104.2	chr2	+	175	1	Intergenic	novelGene_16643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130678377	130678552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130678400_130678600
ES.20105.1	chr2	-	6637	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	-9	0	2	0	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTCTCTGCCTGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	130682063	130548119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.14	chr2	-	5006	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	-2	1624	1	1306	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAGCTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	130682056	130549743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.15	chr2	-	4881	36	NIC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	1	1306	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	16.4669117831325	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAGCTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	130682030	130549743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.16	chr2	-	4979	37	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	7	1306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.4089350286454	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAGCTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	130682045	130549743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579307_130579377_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664336_130664421_130681883
ES.20105.18	chr2	-	4795	35	NIC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	7	1306	combination_of_known_junctions	FALSE	canonical	2	2	junction_34	14.7559148893402	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAAGCTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	130682045	130549743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130681883
ES.20105.20	chr2	-	5004	37	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	0	1299	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.3369232638338	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAGGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	130682052	130549750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554862_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.21	chr2	-	2182	7	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	5055	1299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4990421139544	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAGGAAAAGCTT	6927	False	NA	NA	False	NA	NA	NA	130556794	130549750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130556645
ES.20105.23	chr2	-	3317	19	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	6842	1299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.8549601321824	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAGGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	130592529	130549750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130592178_130592213_130592471
ES.20105.24	chr2	-	4759	35	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.8467372016996	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130682053	130549781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648863_130652741_130652849_130654764_130654862_130656098_130656224_130681883
ES.20105.25	chr2	-	4972	37	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	-10	1268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	16.4881878781803	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130682041	130549781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640205_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.26	chr2	-	1577	3	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	9081	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130552768	130549781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551937_130552727
ES.20105.29	chr2	-	4868	36	NIC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	9	1268	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	16.7220738875906	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130682043	130549781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.30	chr2	-	4466	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	37	2125	14	805	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTGCCTCTGCTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	130682017	130550244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.31	chr2	-	2933	30	NNC	ENSMUSG00000027309.19	novel	2108	21	NA	NA	10	-6988	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.8884108784831	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGCTGAGATGCTCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	130682021	130568746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130568972_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.32	chr2	-	1974	22	NNC	ENSMUSG00000027309.19	novel	2108	21	NA	NA	-4	647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9538015177895	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTTGTTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	130682035	130589723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130589841_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.33	chr2	-	179	1	Intergenic	novelGene_16635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTTTCACCAT	NA	False	NA	NA	False	NA	NA	NA	130600601	130600422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130600400_130600600
ES.20105.34	chr2	-	2424	1	Intergenic	novelGene_16637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6532	False	NA	NA	False	NA	NA	NA	130623481	130621057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130621100_130623500
ES.20105.35	chr2	-	4450	7	FSM	ENSMUSG00000089662.2_ENSMUSG00000027309.19	ENSMUST00000110243.8	1984	7	-176	-2290	-176	115	multi-exon	FALSE	canonical	3	61	junction_6	9.03081145609604	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	1	True	AATAAA	-32	NA	130682241	130645305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.36	chr2	-	1311	8	Fusion	ENSMUSG00000089662.2_ENSMUSG00000027309.19	novel	1984	7	NA	NA	-1	112	multi-exon	TRUE	canonical	3	31	junction_1	16.7063473211928	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTTTGGTGTGTATG	NA	False	NA	-2	True	AATAAA	-29	NA	130682053	130645308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_130645843_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.37	chr2	-	1932	7	FSM	ENSMUSG00000027309.19	ENSMUST00000110243.8	1984	7	25	27	-9	-27	multi-exon	FALSE	canonical	3	61	junction_6	9.03081145609604	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGTAAAAGGATAA	NA	False	NA	NA	False	NA	NA	NA	130682040	130647622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.38	chr2	-	2149	5	ISM	ENSMUSG00000027309.19	ENSMUST00000110243.8	1984	7	25	5599	-9	-378	5prime_fragment	FALSE	canonical	3	61	junction_4	10.9658560997307	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTTTGGTAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	130682040	130653194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.39	chr2	-	212	1	Intergenic	novelGene_16639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTGGTGTTAGTGAGA	3547	False	NA	NA	False	NA	NA	NA	130664188	130663976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130664000_130664200
ES.20105.4	chr2	-	6253	34	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	12.1065062306575	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTCTGCCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	130682001	130548120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654866_130681883
ES.20105.40	chr2	-	4132	1	Intergenic	novelGene_16640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	130674157	130670025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130670000_130674200
ES.20105.6	chr2	-	3819	7	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	5048	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4990421139544	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTCTGCCTGTCT	6920	False	NA	NA	False	AATAAA	-17	NA	130556801	130548120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130556645
ES.20105.7	chr2	-	6716	37	NNC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	16.3186583735034	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTCTCTGCCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	130682056	130548120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590796_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ES.20105.9	chr2	-	6425	35	NIC	ENSMUSG00000027309.19	novel	6628	37	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_34	14.7559148893402	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCTGTCTCTGCCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	130682053	130548121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130681883
ES.20106.1	chr2	-	3374	2	FSM	ENSMUSG00000085566.2	ENSMUST00000135110.2	2884	2	29	-519	-11	519	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCTTCTTGAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	130748287	130714459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130717677_130748130
ES.20106.2	chr2	-	4756	1	Intergenic	novelGene_16644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTCCGGTACTTCTG	NA	False	NA	NA	False	TATAAA	-35	NA	130747296	130742540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130742500_130747300
ES.20106.3	chr2	-	3004	2	NNC	ENSMUSG00000085566.2	novel	2884	2	NA	NA	6	-17962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	130748310	130743491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130746316_130748130
ES.20107.1	chr2	+	8814	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-69	0	-69	0	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTTTCGTTCTGAATG	NA	False	NA	19	True	AATAAA	-22	NA	130748345	130872253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.10	chr2	+	5269	29	NNC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	12.3649335474419	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGCGTTTCGTTCTG	NA	False	NA	15	True	AATAAA	-18	NA	130748408	130872249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130871214
ES.20107.11	chr2	+	4914	29	NNC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-6	-3876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.6410781855119	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGCCTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	130748408	130868377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130748888_130760287_130760446_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836037_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.13	chr2	+	8834	29	NNC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	12.3649335474419	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTTTCGTTCTGAATG	NA	False	NA	19	True	AATAAA	-22	NA	130748410	130872253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867651
ES.20107.15	chr2	+	6717	26	ISM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	29029	4171	28593	-4171	intron_retention	FALSE	canonical	3	35	junction_17	7.89470708766323	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCTGCTCTACTCATG	NA	False	NA	NA	False	NA	NA	NA	130777443	130868082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921
ES.20107.16	chr2	+	3869	22	NNC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-25764	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.7588830053918	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGCGTTTCGTTCTG	NA	False	NA	15	True	AATAAA	-18	NA	130798940	130872249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130815296_130815436_130817894_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130871214
ES.20107.17	chr2	+	6471	16	ISM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	66878	1	-9412	-1	3prime_fragment	FALSE	canonical	3	35	junction_6	9.3571125650788	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCGTTTCGTTCTGAAT	NA	False	NA	18	True	AATAAA	-21	NA	130815292	130872252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.18	chr2	+	177	1	ISM	ENSMUSG00000027312.15	ENSMUST00000151364.2	4139	3	931	8159	931	2709	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACACCTATAACT	NA	False	NA	NA	False	NA	NA	NA	130839027	130839204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130839000_130839200
ES.20107.19	chr2	+	3154	6	ISM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	97951	1887	8269	-1887	3prime_fragment	FALSE	canonical	3	40	junction_5	5.03587132480567	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTTTCTGTGCCATA	6142	False	NA	NA	False	ATTAAA	-22	NA	130846365	130870366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.2	chr2	+	4933	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-60	3872	-60	-3872	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	130748354	130868381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.20	chr2	+	4263	1	Intergenic	novelGene_16646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9805	False	NA	NA	False	NA	NA	NA	130850028	130854291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130850000_130854300
ES.20107.21	chr2	+	207	1	Intergenic	novelGene_16647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATATTAACAGTATT	NA	False	NA	NA	False	NA	NA	NA	130859453	130859660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130859500_130859700
ES.20107.3	chr2	+	5186	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-54	3613	-54	-3613	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTCTTTCCTTCTCTTT	NA	False	NA	39	True	TATAAA	-45	NA	130748360	130868640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.5	chr2	+	4658	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-34	4121	-34	-4121	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAAGGTGATGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	130748380	130868132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.6	chr2	+	9261	25	NNC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-19	-3645	intron_retention	FALSE	canonical	0	0	junction_13	15.9118666409696	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTCTCTATAGAAACTT	NA	False	NA	7	True	TATAAA	-13	NA	130748395	130868608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130815296_130815436_130817894_130817989_130821849_130822070_130823823_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130846526_130855526_130855589_130860532_130862969_130864921_130865037_130867736
ES.20107.7	chr2	+	4524	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-18	4239	-18	-4239	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTCTGTGTCCAGCA	NA	False	NA	NA	False	NA	NA	NA	130748396	130868014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.8	chr2	+	6878	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	-17	1884	-17	-1884	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCTGTGCCATATAC	NA	False	NA	NA	False	ATTAAA	-25	NA	130748397	130870369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ES.20107.9	chr2	+	7702	27	NIC	ENSMUSG00000027312.15	novel	8745	29	NA	NA	-7	-3628	intron_retention	FALSE	canonical	2	4	junction_12	12.1607210351473	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTAATTTTAATCCAT	NA	False	NA	24	True	TATAAA	-30	NA	130748407	130868625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921
ES.20108.1	chr2	-	211	1	Intergenic	novelGene_16645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGTTTCCTTTAGCA	NA	False	NA	NA	False	NA	NA	NA	130789364	130789153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_130789200_130789400
ES.20109.1	chr2	-	1132	4	ISM	ENSMUSG00000027316.16	ENSMUST00000110239.8	810	6	1153	-571	-18	2	intron_retention	FALSE	canonical	3	10	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTGGTTTTCTGTCA	NA	False	NA	-3	True	AATAAA	-16	NA	130883449	130881556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130882179_130882318_130882396_130882935_130883071_130883151
ES.20109.2	chr2	-	1164	4	NNC	ENSMUSG00000027316.16	novel	1125	4	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_1	8.80656320908194	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTGGTTTTCTGTCA	NA	False	NA	-3	True	AATAAA	-16	NA	130883430	130881556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130882246_130882334_130882396_130882935_130883071_130883151
ES.20109.3	chr2	-	1705	2	FSM	ENSMUSG00000027316.16	ENSMUST00000136569.2	1791	2	87	-1	33	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAACCTGGTTTTCTGT	NA	False	NA	-5	True	AATAAA	-14	NA	130883344	130881558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130883071_130883151
ES.20109.4	chr2	-	1914	3	NIC	ENSMUSG00000027316.16	novel	1125	4	NA	NA	-197	-1	intron_retention	FALSE	canonical	2	5	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAACCTGGTTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	130883628	130881560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130882246_130882318_130883071_130883151
ES.2011.1	chr1	-	174	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACACTTAA	NA	False	NA	NA	False	NA	NA	NA	179019475	179019301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179019300_179019500
ES.20110.1	chr2	+	171	1	Intergenic	novelGene_16648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTCCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	130891086	130891257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_130891100_130891300
ES.20111.1	chr2	+	184	1	Genic_Genomic	ENSMUSG00000074793.11	novel	NA	NA	NA	NA	9660	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATCATGGGACA	NA	False	NA	NA	False	NA	NA	NA	130979073	130979257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_130979100_130979300
ES.20112.1	chr2	-	1323	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-68	-14	-7	13	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGTTTTTTGTTCTC	NA	False	NA	-1	True	AATAAA	-28	NA	131002008	130988230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ES.20112.10	chr2	-	3403	6	NNC	ENSMUSG00000027327.17	novel	1358	7	NA	NA	3	4	intron_retention	FALSE	canonical	1	3	junction_1	340.540981381096	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGTTAGCGGGGGTTT	NA	False	NA	-10	True	AATAAA	-19	NA	131001951	130988239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130988896_130989111_130989204_130990075_130990215_130991360_130993681_130995513_130995631_131001872
ES.20112.11	chr2	-	4732	1	Genic_Genomic	ENSMUSG00000027327.17	novel	NA	NA	NA	NA	-2025	2	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGGTTAGCGGGGGT	NA	False	NA	-12	True	AATAAA	-17	NA	130992973	130988241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_130988200_130993000
ES.20112.12	chr2	-	5473	4	NIC	ENSMUSG00000027327.17	novel	1241	6	NA	NA	-13	1	intron_retention	FALSE	canonical	3	656	junction_1	41.0446910899164	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGGTTAGCGGGGG	NA	False	NA	-13	True	AATAAA	-16	NA	131001975	130988242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130988896_130989080_130993681_130995513_130995631_131001872
ES.20112.13	chr2	-	1479	8	NNC	ENSMUSG00000027327.17	novel	1358	7	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	338.276061638347	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGGTTAGCGGGGG	NA	False	NA	-13	True	AATAAA	-16	NA	131001976	130988242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130988896_130989080_130989204_130989600_130989695_130990075_130990215_130991360_130991467_130993537_130993681_130995513_130995631_131001872
ES.20112.14	chr2	-	1570	6	NIC	ENSMUSG00000027327.17	novel	1358	7	NA	NA	19	0	intron_retention	FALSE	canonical	2	7	junction_3	339.524137580821	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAGAGGTTAGCGGG	NA	False	NA	-15	True	AATAAA	-14	NA	131001982	130988244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130989204_130990075_130990215_130991360_130991463_130993537_130993681_130995513_130995631_131001872
ES.20112.15	chr2	-	4978	5	ISM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	2503	2	2503	-2	3prime_fragment	FALSE	canonical	3	656	junction_1	24.5662369930765	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATTTCAGAGGTTAGCG	NA	False	NA	-17	True	AATAAA	-12	NA	130999437	130988246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513
ES.20112.16	chr2	-	798	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-36	479	-14	0	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTGTGTGACGGTGTG	NA	False	NA	NA	False	NA	NA	NA	131001976	130988723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ES.20112.17	chr2	-	779	5	ISM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	-42	689	19	147	5prime_fragment	FALSE	canonical	3	675	junction_3	26.9849495089392	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGCCAGCACGCTCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	131001982	130988933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ES.20112.2	chr2	-	1376	7	NNC	ENSMUSG00000027327.17	novel	1358	7	NA	NA	-14	11	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	321.184093974503	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGGGGGTTTTTTGTTC	NA	False	NA	-3	True	AATAAA	-26	NA	131001976	130988232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001220_131001308_131001872
ES.20112.3	chr2	-	1267	6	NNC	ENSMUSG00000027327.17	novel	1241	6	NA	NA	13	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	284.924130252248	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTAGCGGGGGTTTTTTG	NA	False	NA	-6	True	AATAAA	-23	NA	131001988	130988235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_130988896_130989111_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ES.20112.4	chr2	-	1312	6	FSM	ENSMUSG00000027327.17	ENSMUST00000028800.12	832	6	6	-486	6	6	multi-exon	FALSE	canonical	3	7	junction_4	282.042124513343	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTAGCGGGGGTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	131001995	130988237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995504_130995631_131001872
ES.20112.6	chr2	-	1409	7	NIC	ENSMUSG00000027327.17	novel	750	6	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	323.769851386238	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTAGCGGGGGTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	131001963	130988237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_130997561_130997700_131001872
ES.20112.7	chr2	-	4769	4	NIC	ENSMUSG00000027327.17	novel	1241	6	NA	NA	1	6	intron_retention	FALSE	canonical	3	675	junction_2	31.0590834807897	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTAGCGGGGGTTTTT	NA	False	NA	-8	True	AATAAA	-21	NA	131001953	130988237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_130989204_130990075_130993681_130995513_130995631_131001872
ES.20112.9	chr2	-	1628	6	FSM	ENSMUSG00000027327.17	ENSMUST00000133602.8	750	6	-37	-841	2	4	multi-exon	FALSE	canonical	1	3	junction_4	341.495885773167	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGTTAGCGGGGGTTT	NA	False	NA	-10	True	AATAAA	-19	NA	131001999	130988239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_130989204_130990075_130990215_130993537_130993681_130995513_130995631_130997561_130997700_131001872
ES.20113.1	chr2	-	271	1	Intergenic	novelGene_16649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1858	False	NA	NA	False	NA	NA	NA	131010512	131010241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_131010200_131010500
ES.20114.1	chr2	+	1289	1	Antisense	novelGene_ENSMUSG00000027329.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTTCTAAATGGATT	NA	False	NA	NA	False	GATAAA	-12	NA	131013558	131014847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_131013600_131014800
ES.20115.1	chr2	-	1508	7	FSM	ENSMUSG00000027329.10	ENSMUST00000110218.9	2600	7	370	722	-178	573	multi-exon	TRUE	canonical	0	0	junction_5	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTGTGCCTGCCTTCT	8402	False	NA	NA	False	ATTAAA	-17	NA	131016751	131012957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131013711_131013821_131013946_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484
ES.20115.2	chr2	-	6061	8	Fusion	ENSMUSG00000068267.6_ENSMUSG00000027329.10	novel	681	7	NA	NA	2	570	multi-exon	FALSE	non_canonical	0	0	junction_2	1.30930734141595	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTCCTGTGCCTGCCT	3168	False	NA	NA	False	ATTAAA	-14	NA	131021985	131012960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_131013711_131013821_131013870_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484_131019776_131020377
ES.20115.3	chr2	-	2868	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	-89	2107	-89	-2107	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCATCCTTCATGGTCT	3077	False	NA	0	True	AATAAA	-45	NA	131022076	131019208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131019200_131022100
ES.20115.4	chr2	-	2423	2	Genic_Genomic	ENSMUSG00000068267.6	novel	4886	1	NA	NA	277	-2109	multi-exon	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCATCCTTCATGGT	3443	False	NA	-2	True	AATAAA	-43	NA	131021710	131019210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_131020421_131020497
ES.20115.5	chr2	-	1979	2	Genic_Genomic	ENSMUSG00000068267.6	novel	4886	1	NA	NA	195	-2110	multi-exon	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGATGCATCCTTCATGG	3361	False	NA	-3	True	AATAAA	-42	NA	131021792	131019211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_131019776_131020377
ES.20116.1	chr2	+	3137	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	-41	-7	-41	5	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTATGCAGAGCCAC	NA	False	NA	NA	False	AATAAA	-23	NA	131028827	131040422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.10	chr2	+	3772	12	NIC	ENSMUSG00000027330.17	novel	3004	15	NA	NA	6	0	intron_retention	FALSE	canonical	3	36	junction_6	18.377132754172	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028883	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131036680_131038896_131039009_131039148
ES.20116.11	chr2	+	4149	11	NIC	ENSMUSG00000027330.17	novel	3004	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	36	junction_6	18.0856296545075	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028885	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131035069_131035158_131035333_131035514_131036680_131038896_131039009_131039148
ES.20116.13	chr2	+	3157	15	NNC	ENSMUSG00000027330.17	novel	3089	16	NA	NA	10	-1	intron_retention	FALSE	canonical	1	2	junction_9	24.1353538636261	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATCTGTTTGTTATGC	NA	False	NA	NA	False	AATAAA	-15	NA	131028887	131040414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035517_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.14	chr2	+	3231	15	NIC	ENSMUSG00000027330.17	novel	3089	16	NA	NA	35	-2	intron_retention	FALSE	canonical	3	45	junction_7	17.244490394894	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATCTGTTTGTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	131028912	131040413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036680_131038896_131039009_131039148
ES.20116.15	chr2	+	2880	14	NIC	ENSMUSG00000027330.17	novel	3004	15	NA	NA	282	-1	intron_retention	FALSE	canonical	3	36	junction_6	17.446452310566	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATCTGTTTGTTATGC	NA	False	NA	NA	False	AATAAA	-15	NA	131029159	131040414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.16	chr2	+	3665	13	NIC	ENSMUSG00000027330.17	novel	3089	16	NA	NA	315	0	intron_retention	FALSE	canonical	3	54	junction_6	14.9657015279011	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131029192	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036680_131038896_131039009_131039148
ES.20116.17	chr2	+	1945	7	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	6278	2	362	0	3prime_fragment	FALSE	canonical	3	58	junction_2	12.4051960439523	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131035155	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.2	chr2	+	3051	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	-47	0	-38	0	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGTTTGTTATGCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	131028830	131040417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.3	chr2	+	2801	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	-16	219	-7	-217	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGGTCCAAGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	131028861	131040198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.4	chr2	+	3800	14	NIC	ENSMUSG00000027330.17	novel	3089	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	54	junction_6	14.3786495238662	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATCTGTTTGTTATGC	NA	False	NA	NA	False	AATAAA	-15	NA	131028868	131040414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.5	chr2	+	3265	14	NNC	ENSMUSG00000027330.17	novel	3004	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_5	25.3939376821697	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028878	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033383_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036680_131038896_131039009_131039148
ES.20116.8	chr2	+	3455	15	NIC	ENSMUSG00000027330.17	novel	3089	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	45	junction_7	16.634117877153	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATCTGTTTGTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	131028879	131040413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20116.9	chr2	+	3377	14	NIC	ENSMUSG00000027330.17	novel	3004	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	36	junction_6	16.9552142404875	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028881	131040415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ES.20117.1	chr2	+	3616	1	Intergenic	novelGene_16650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCCTGGTCCTAGCTT	NA	False	NA	NA	False	AATAAA	-31	NA	131041310	131044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131041300_131044900
ES.20118.1	chr2	+	3143	1	Genic_Genomic	ENSMUSG00000068264.12	novel	NA	NA	NA	NA	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	False	NA	10	True	ATTAAA	-16	NA	131052290	131055433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_131052300_131055400
ES.20118.2	chr2	+	1374	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	5	-511	5	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	False	NA	10	True	ATTAAA	-16	NA	131052294	131055433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131052602_131054366
ES.20118.3	chr2	+	1593	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	-65	-7	5	7	multi-exon	FALSE	canonical	3	39	junction_2	10	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTGTGCGACCTCTT	NA	False	NA	18	True	ATTAAA	-24	NA	131052294	131055441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131052602_131053182_131053394_131054366
ES.20118.4	chr2	+	1400	3	NNC	ENSMUSG00000068264.12	novel	1521	3	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_1	19.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	False	NA	10	True	ATTAAA	-16	NA	131052296	131055433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131052419_131053182_131053394_131054366
ES.20118.5	chr2	+	1309	3	NNC	ENSMUSG00000068264.12	novel	1101	4	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_1	19.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	False	NA	10	True	ATTAAA	-16	NA	131052328	131055433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131052360_131053182_131053394_131054366
ES.20119.1	chr2	-	174	1	Intergenic	novelGene_16651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGCAGAGAC	9684	False	NA	NA	False	NA	NA	NA	131074174	131074000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_131074000_131074200
ES.2012.1	chr1	+	211	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAAAGAAGAAAAGCATA	NA	False	NA	NA	False	NA	NA	NA	179046737	179046948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179046700_179046900
ES.20120.1	chr2	+	3423	9	NNC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-1311	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	77.8362664508004	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	5949	False	NA	14	True	ATTAAA	-19	NA	131074671	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131074811_131075113_131075274_131075729_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.10	chr2	+	2973	8	NNC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.5097559775897	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7251	False	NA	14	True	ATTAAA	-19	NA	131075973	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076048_131079346_131079461_131080655_131080831_131082234_131082413_131083820_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.12	chr2	+	4938	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-6	-2065	-2	2065	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGGCATTGAATATTTA	7258	False	NA	NA	False	NA	NA	NA	131075980	131092010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.13	chr2	+	2942	8	FSM	ENSMUSG00000037523.14	ENSMUST00000130597.8	2959	8	20	-3	16	0	multi-exon	FALSE	canonical	1	1	junction_2	83.1212539435183	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7280	False	NA	14	True	ATTAAA	-19	NA	131076002	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131076048_131080655_131080831_131081371_131081463_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.14	chr2	+	3125	7	NNC	ENSMUSG00000037523.14	novel	3057	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.0435885375208	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7281	False	NA	11	True	ATTAAA	-16	NA	131076003	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085243_131087122_131087590_131088283
ES.20120.15	chr2	+	4232	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	17	-2	intron_retention	FALSE	canonical	3	174	junction_3	6.30555310817378	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCTTGTGAGTTCCAA	7281	False	NA	9	True	ATTAAA	-14	NA	131076003	131089940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131076048_131080655_131080831_131082234_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.16	chr2	+	5138	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	-21	-2060	17	2060	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGACAGGCATTGAAT	7281	False	NA	NA	False	NA	NA	NA	131076003	131092005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.17	chr2	+	2817	7	NNC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.953285313722	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7283	False	NA	11	True	ATTAAA	-16	NA	131076005	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076048_131080683_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.18	chr2	+	3072	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	-15	0	-15	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7287	False	NA	14	True	ATTAAA	-19	NA	131076009	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.19	chr2	+	4247	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	174	junction_3	7.91454357496375	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7288	False	NA	14	True	ATTAAA	-19	NA	131076010	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131076048_131080655_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.2	chr2	+	3255	8	NNC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-1308	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.7929197442096	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCTTGTGAGTTCCAA	5952	False	NA	9	True	ATTAAA	-14	NA	131074674	131089940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131074811_131075729_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.20	chr2	+	3558	7	NNC	ENSMUSG00000037523.14	novel	3057	7	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.2120875570371	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCTTGTGAGTTCCAA	7303	False	NA	9	True	ATTAAA	-14	NA	131076025	131089940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076783_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.21	chr2	+	6238	7	NNC	ENSMUSG00000037523.14	novel	3057	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	61.9159376359055	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7306	False	NA	14	True	ATTAAA	-19	NA	131076028	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.22	chr2	+	3164	8	NNC	ENSMUSG00000037523.14	novel	3057	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2778631891446	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7306	False	NA	11	True	ATTAAA	-16	NA	131076028	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076276_131079346_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.23	chr2	+	3030	7	NNC	ENSMUSG00000037523.14	novel	3057	7	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.1756751695231	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCTTGTGAGTTCCAA	7316	False	NA	9	True	ATTAAA	-14	NA	131076038	131089940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076276_131080655_131080823_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.24	chr2	+	2904	7	ISM	ENSMUSG00000037523.14	ENSMUST00000130597.8	2959	8	4663	0	-3208	0	3prime_fragment	FALSE	canonical	1	1	junction_1	86.6860555234936	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	NA	False	NA	11	True	ATTAAA	-16	NA	131080645	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131080831_131081371_131081463_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.25	chr2	+	4086	2	NIC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	1309	0	intron_retention	FALSE	canonical	3	177	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	NA	False	NA	11	True	ATTAAA	-16	NA	131085162	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131087590_131088283
ES.20120.26	chr2	+	5265	2	ISM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	11196	-3234	3367	3234	3prime_fragment	FALSE	canonical	3	177	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAATAAAATA	823	False	NA	NA	False	NA	NA	NA	131087220	131093179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131087590_131088283
ES.20120.27	chr2	+	4925	1	Genic_Genomic	ENSMUSG00000037523.14	novel	NA	NA	NA	NA	6064	4897	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTTTGTTCA	3520	False	NA	NA	False	NA	NA	NA	131089917	131094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_131089900_131094800
ES.20120.3	chr2	+	3315	9	NNC	ENSMUSG00000037523.14	novel	2959	8	NA	NA	-1307	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.1358602341568	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	5953	False	NA	11	True	ATTAAA	-16	NA	131074675	131089942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131074811_131075214_131075274_131075729_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.4	chr2	+	2941	7	NNC	ENSMUSG00000037523.14	novel	887	4	NA	NA	-1307	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	67.1004636513208	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	5953	False	NA	14	True	ATTAAA	-19	NA	131074675	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131074811_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.5	chr2	+	3989	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-1302	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	72.2744768227346	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAATCTTGTGAGTTCCA	5958	False	NA	8	True	ATTAAA	-13	NA	131074680	131089939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131076048_131080655_131080831_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.6	chr2	+	3399	7	NNC	ENSMUSG00000037523.14	novel	887	4	NA	NA	-1302	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.953285313722	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	5958	False	NA	14	True	ATTAAA	-19	NA	131074680	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131075274_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.7	chr2	+	5003	7	NNC	ENSMUSG00000037523.14	novel	887	4	NA	NA	-1302	2067	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	67.1004636513208	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATTGAATATTTATT	5958	False	NA	NA	False	NA	NA	NA	131074680	131092012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131074811_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.8	chr2	+	3412	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	-545	0	-541	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	6719	False	NA	14	True	ATTAAA	-19	NA	131075441	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20120.9	chr2	+	3000	8	NNC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	77.1359785293054	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7245	False	NA	14	True	ATTAAA	-19	NA	131075967	131089945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131076048_131079346_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ES.20121.1	chr2	+	3894	7	Fusion	ENSMUSG00000037514.19_ENSMUSG00000086329.2	novel	370	3	NA	NA	-486	0	multi-exon	FALSE	canonical	0	0	junction_1	220.055043619141	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	378	False	NA	3	True	AATAAA	-17	NA	131103928	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_131104018_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.10	chr2	+	1910	6	NNC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.516651269923	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGGAGGTCATCTT	864	False	NA	12	True	NA	NA	NA	131104414	131138610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104997_131115830_131116184_131122076_131122331_131124511_131124689_131135318_131135445_131138192
ES.20121.11	chr2	+	3697	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-73	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
ES.20121.12	chr2	+	1571	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-5	2700	0	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACCCCATCCCACCCCC	864	False	NA	NA	False	GATAAA	-20	NA	131104414	131138408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.13	chr2	+	1343	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	864	False	NA	13	True	NA	NA	NA	131104414	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
ES.20121.14	chr2	+	3573	4	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	277.441084837043	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131135318_131135445_131138192
ES.20121.15	chr2	+	1218	4	FSM	ENSMUSG00000037514.19	ENSMUST00000145904.2	558	4	-301	-359	0	-1	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGGAGGTCATCTT	864	False	NA	12	True	NA	NA	NA	131104414	131138610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
ES.20121.16	chr2	+	3942	6	Fusion	ENSMUSG00000037514.19_ENSMUSG00000086329.2	novel	646	6	NA	NA	0	0	multi-exon	FALSE	canonical	3	12	junction_3	274.420115880742	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	864	False	NA	3	True	AATAAA	-17	NA	131104414	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_131104736_131115830_131116184_131129393_131129518_131130501_131130606_131135318_131135445_131138192
ES.20121.17	chr2	+	4016	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGCTTGCATGT	864	False	NA	4	True	AATAAA	-18	NA	131104414	131141107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.18	chr2	+	1646	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	203.986666230908	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGGAGGTCATCTT	865	False	NA	12	True	NA	NA	NA	131104415	131138610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131138192
ES.20121.19	chr2	+	1504	6	NIC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	251.472940890268	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	865	False	NA	13	True	NA	NA	NA	131104415	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131138192
ES.20121.2	chr2	+	4328	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-62	0	-57	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	807	False	NA	5	True	AATAAA	-19	NA	131104357	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.20	chr2	+	1075	4	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	277.441084837043	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	865	False	NA	13	True	NA	NA	NA	131104415	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131135318_131135445_131138192
ES.20121.21	chr2	+	761	2	ISM	ENSMUSG00000037514.19	ENSMUST00000131779.8	1304	5	1	9086	1	-9086	5prime_fragment	FALSE	canonical	3	620	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGCTTGAATATTCTT	865	False	NA	13	True	ATTAAA	-25	NA	131104415	131116271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131104736_131115830
ES.20121.22	chr2	+	2088	5	NNC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	1	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	240.508315864546	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAAGGGTTTGTTTC	865	False	NA	NA	False	NA	NA	NA	131104415	131139514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104736_131115830_131116027_131129393_131129518_131135318_131135445_131138192
ES.20121.23	chr2	+	4127	7	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000184105.9	1398	7	-29	-2700	1	0	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	865	False	NA	5	True	AATAAA	-19	NA	131104415	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.24	chr2	+	3873	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	215.37817902471	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	865	False	NA	5	True	AATAAA	-19	NA	131104415	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.25	chr2	+	7398	2	NNC	ENSMUSG00000037514.19	novel	1791	9	NA	NA	1	1905	intron_retention	TRUE	non_canonical	0	0	junction_1	0	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAAAAAACAAAACA	865	False	NA	NA	False	NA	NA	NA	131104415	131127262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131106053_131121501
ES.20121.26	chr2	+	4147	7	Fusion	ENSMUSG00000037514.19_ENSMUSG00000086329.2	novel	1398	7	NA	NA	1	-2	multi-exon	FALSE	canonical	0	0	junction_2	248.163084818566	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTGTTTGCTTGCA	865	False	NA	1	True	AATAAA	-15	NA	131104415	131141104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129369_131129518_131135318_131135445_131138192
ES.20121.27	chr2	+	2683	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-4	1587	1	910	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTTGTTTCAGAGCCT	865	False	NA	NA	False	CATAAA	-5	NA	131104415	131139521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.28	chr2	+	1503	7	NNC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.055043619141	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	865	False	NA	13	True	NA	NA	NA	131104415	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104609_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.29	chr2	+	4529	7	NNC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.527855592889	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	3	True	AATAAA	-17	NA	131104415	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104997_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.3	chr2	+	3742	4	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000145904.2	558	4	-329	-2855	-28	0	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	836	False	NA	3	True	AATAAA	-17	NA	131104386	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
ES.20121.30	chr2	+	4141	7	NNC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.527855592889	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	865	False	NA	3	True	AATAAA	-17	NA	131104415	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104609_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.31	chr2	+	3998	6	Fusion	ENSMUSG00000037514.19_ENSMUSG00000086329.2	novel	1398	7	NA	NA	2	0	multi-exon	FALSE	canonical	0	0	junction_2	251.472940890268	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	866	False	NA	3	True	AATAAA	-17	NA	131104416	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131138192
ES.20121.32	chr2	+	2150	6	NNC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	-2	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	231.90118585294	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAAGGGTTTGTTTC	867	False	NA	NA	False	NA	NA	NA	131104417	131139514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104609_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.33	chr2	+	3815	3	ISM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-27	13045	-2	6	intron_retention	FALSE	canonical	0	0	junction_2	310	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGTTGTGAATAGTG	867	False	NA	NA	False	NA	NA	NA	131104417	131125363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131104736_131115830_131116041_131122076
ES.20121.35	chr2	+	726	3	ISM	ENSMUSG00000037514.19	ENSMUST00000131779.8	1304	5	9	3220	4	-3220	5prime_fragment	FALSE	canonical	3	323	junction_2	148.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGACTCAGTTGGATTC	873	False	NA	NA	False	AATAAA	-12	NA	131104423	131122137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131104736_131115830_131116184_131122076
ES.20121.36	chr2	+	1358	6	NIC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	215.37817902471	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	883	False	NA	13	True	NA	NA	NA	131104433	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.37	chr2	+	2515	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-7	-1110	-7	907	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGGTTTGTTTCAGAG	887	False	NA	NA	False	CATAAA	-2	NA	131104437	131139518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.38	chr2	+	4056	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	217.116927023206	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	902	False	NA	5	True	AATAAA	-19	NA	131104452	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116184_131122076_131122331_131129393_131129518_131135318_131135445_131138192
ES.20121.39	chr2	+	2218	5	NNC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	-18	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	240.508315864546	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAAGGGTTTGTTTC	919	False	NA	NA	False	NA	NA	NA	131104469	131139514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104736_131115830_131116184_131129366_131129518_131135318_131135445_131138192
ES.20121.4	chr2	+	1793	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-24	2497	-19	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	845	False	NA	13	True	NA	NA	NA	131104395	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.40	chr2	+	1141	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-17	2498	-17	-3	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCCTTGGAGGTCATC	920	False	NA	10	True	NA	NA	NA	131104470	131138608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
ES.20121.41	chr2	+	175	1	Intergenic	novelGene_16652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAGAAAGAAAGAGAAGA	7673	False	NA	NA	False	NA	NA	NA	131111223	131111398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131111200_131111400
ES.20121.42	chr2	+	13632	3	ISM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	11944	2494	327	1	3prime_fragment	FALSE	canonical	3	415	junction_1	68	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGAGGTCATCTTTC	NA	False	NA	14	True	NA	NA	NA	131116431	131138612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131129518_131135318_131135445_131138192
ES.20121.43	chr2	+	4521	2	NNC	ENSMUSG00000037514.19	novel	1304	5	NA	NA	6626	50689	intron_retention	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAAAAGATAAATATTTAA	NA	False	NA	NA	False	NA	NA	NA	131122730	131191797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131127229_131191774
ES.20121.44	chr2	+	2552	2	ISM	ENSMUSG00000037514.19	ENSMUST00000183349.2	646	6	17207	-383	17207	0	3prime_fragment	FALSE	canonical	3	551	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	5885	False	NA	13	True	NA	NA	NA	131133311	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131135445_131138192
ES.20121.45	chr2	+	5912	1	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	19090	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	7768	False	NA	3	True	AATAAA	-17	NA	131135194	131141106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131135200_131141100
ES.20121.46	chr2	+	151	1	Intergenic	novelGene_16653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAAGATTTAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	131149033	131149184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131149000_131149200
ES.20121.47	chr2	+	183	1	Intergenic	novelGene_16654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAACAACAAACA	NA	False	NA	NA	False	NA	NA	NA	131160623	131160806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131160600_131160800
ES.20121.5	chr2	+	2143	4	FSM	ENSMUSG00000037514.19	ENSMUST00000145904.2	558	4	-320	-1265	-19	905	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAAGGGTTTGTTTCAG	845	False	NA	NA	False	NA	NA	NA	131104395	131139516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
ES.20121.6	chr2	+	3855	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	849	False	NA	5	True	AATAAA	-19	NA	131104399	131141108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
ES.20121.7	chr2	+	1638	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	-37	-203	-7	0	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	857	False	NA	13	True	NA	NA	NA	131104407	131138611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ES.20121.8	chr2	+	947	3	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	310	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCCTTGGAGGTCATC	864	False	NA	10	True	NA	NA	NA	131104414	131138608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131104736_131115830_131116041_131138192
ES.20121.9	chr2	+	1008	2	NNC	ENSMUSG00000037514.19	novel	1304	5	NA	NA	0	-9098	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCATTTCTAATGGAGC	864	False	NA	1	True	ATTAAA	-13	NA	131104414	131116259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131104994_131115830
ES.20122.1	chr2	-	4784	2	Antisense	novelGene_ENSMUSG00000037514.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAATCCCAGCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	131113984	131107995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131111245_131112449
ES.20123.1	chr2	-	5921	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	56	1	37	0	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAATGACCCGTGCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	131194745	131139984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ES.20123.2	chr2	-	5555	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	3	420	3	-417	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGGACCTGTCAACTT	NA	False	NA	NA	False	AATAAA	-22	NA	131194798	131140403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ES.20123.3	chr2	-	5334	5	NIC	ENSMUSG00000048911.16	novel	5978	6	NA	NA	52	-420	intron_retention	FALSE	canonical	0	0	junction_4	8.87059749960509	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGGACCTGTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	131194730	131140406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131194655
ES.20123.4	chr2	-	5610	7	FSM	ENSMUSG00000048911.16	ENSMUST00000183902.2	1466	7	14	-4158	14	-421	multi-exon	FALSE	canonical	0	0	junction_2	9.08753725347706	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTTGGACCTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	131194768	131140407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131145501_131146171_131146252_131146605_131146695_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ES.20123.6	chr2	-	5494	5	NIC	ENSMUSG00000048911.16	novel	5978	6	NA	NA	-7	-426	intron_retention	FALSE	canonical	1	1	junction_3	8.73212459828649	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTGTATTTGGACC	NA	False	NA	NA	False	AATAAA	-13	NA	131194789	131140412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131145501_131146171_131146252_131147571_131147614_131155082_131155233_131194655
ES.20123.7	chr2	-	3844	1	ISM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	49882	1092	10315	-1089	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTAAATGGGACCATCA	3554	False	NA	NA	False	TTTAAA	-4	NA	131144919	131141075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_131141100_131144900
ES.20123.8	chr2	-	3950	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	37	1991	18	-1988	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCCTTCCTTGAAAAA	NA	False	NA	NA	False	TATAAA	-16	NA	131194764	131141974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ES.20123.9	chr2	-	1944	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	6	4028	6	554	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGGCTTTGCTACTCT	NA	False	NA	NA	False	NA	NA	NA	131194795	131144011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ES.20124.1	chr2	+	176	1	Intergenic	novelGene_16655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131275253	131275429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131275300_131275400
ES.20125.1	chr2	+	2264	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	-5	11	-5	0	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333678	131367092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ES.20125.11	chr2	+	4006	6	ISM	ENSMUSG00000027333.19	ENSMUST00000183947.8	1437	7	-53	7	-33	-2	intron_retention	FALSE	canonical	2	5	junction_4	54.1922503684798	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCTCCTTTGCTTCTC	NA	False	NA	13	True	AATAAA	-14	NA	131333809	131367085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362974_131363092_131363978
ES.20125.12	chr2	+	2168	6	NIC	ENSMUSG00000027333.19	novel	1991	7	NA	NA	-18	1	intron_retention	FALSE	canonical	3	14	junction_4	49.7015090314167	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131333824	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131364067_131364140_131366662
ES.20125.13	chr2	+	4348	6	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	35	junction_5	42.24689337691	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCACGCTCCTTTGCTT	NA	False	NA	10	True	AATAAA	-11	NA	131333841	131367082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131366254_131366662
ES.20125.14	chr2	+	1665	8	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	57.7923799793145	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131333853	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362841_131363092_131363978_131364140_131366163_131366254_131366662
ES.20125.15	chr2	+	4587	6	ISM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	13	3	-8	2	intron_retention	FALSE	canonical	3	134	junction_5	4.57820925690384	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTGCTTCTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	131333875	131367089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978
ES.20125.16	chr2	+	2193	7	NNC	ENSMUSG00000027333.19	novel	471	4	NA	NA	1341	1	intron_retention	FALSE	canonical	3	6	junction_1	49.1923661647708	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131352212	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131352424_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ES.20125.17	chr2	+	4852	5	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	3160	-2	intron_retention	FALSE	canonical	3	35	junction_4	46.6074028454708	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCTCCTTTGCTTCTC	1022	False	NA	13	True	AATAAA	-14	NA	131354031	131367085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131354138_131358136_131358364_131362014_131362189_131362331_131366254_131366662
ES.20125.18	chr2	+	3366	5	ISM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	22833	17	-5589	-1	3prime_fragment	FALSE	canonical	3	113	junction_4	12.8549601321824	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCTCCTTTGCTTCTCT	3507	False	NA	14	True	AATAAA	-15	NA	131356516	131367086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ES.20125.19	chr2	+	5596	2	FSM	ENSMUSG00000027333.19	ENSMUST00000151143.2	720	2	-4854	-22	-3141	-4	multi-exon	FALSE	canonical	3	113	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCACGCTCCTTTGCTTC	5955	False	NA	11	True	AATAAA	-12	NA	131358964	131367083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131364140_131366662
ES.20125.2	chr2	+	1536	7	FSM	ENSMUSG00000027333.19	ENSMUST00000183947.8	1437	7	-103	4	76	1	multi-exon	FALSE	canonical	2	5	junction_4	49.4705299479734	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131333759	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362974_131363092_131363978_131364140_131366662
ES.20125.20	chr2	+	3743	1	NIC	ENSMUSG00000027333.19	novel	2270	7	NA	NA	-477	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACGCTCCTTTGCTTCT	NA	False	NA	12	True	AATAAA	-13	NA	131363341	131367084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131363300_131367100
ES.20125.3	chr2	+	1856	9	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	79	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	56.1844061995853	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCTCCTTTGCTTCTCT	NA	False	NA	14	True	AATAAA	-15	NA	131333762	131367086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366163_131366254_131366662
ES.20125.4	chr2	+	2258	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	-88	0	-68	0	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333774	131367092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
ES.20125.5	chr2	+	2455	6	NNC	ENSMUSG00000027333.19	novel	2223	6	NA	NA	-57	-2	intron_retention	FALSE	canonical	0	0	junction_2	54.5072472245664	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCTCCTTTGCTTCTC	NA	False	NA	13	True	AATAAA	-14	NA	131333785	131367085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131333957_131353903_131354138_131357974_131358364_131362014_131363092_131363978_131364140_131366662
ES.20125.6	chr2	+	1620	7	NIC	ENSMUSG00000027333.19	novel	1617	8	NA	NA	-56	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	50.5857358023649	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACGCTCCTTTGCT	NA	False	NA	9	True	AATAAA	-10	NA	131333786	131367081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131363978_131364140_131366662
ES.20125.7	chr2	+	2288	6	FSM	ENSMUSG00000027333.19	ENSMUST00000151627.8	2223	6	-72	7	-52	-2	multi-exon	FALSE	canonical	3	113	junction_5	11.7234807118023	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGCTCCTTTGCTTCTC	NA	False	NA	13	True	AATAAA	-14	NA	131333790	131367085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131363092_131363978_131364140_131366662
ES.20125.8	chr2	+	1590	8	NIC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-47	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	58.2082818989931	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131333795	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362974_131363092_131363978_131364140_131366163_131366254_131366662
ES.20125.9	chr2	+	2224	8	NNC	ENSMUSG00000027333.19	novel	2170	8	NA	NA	-44	1	intron_retention	FALSE	canonical	0	0	junction_4	59.2714268498433	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	False	NA	16	True	AATAAA	-17	NA	131333798	131367088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362337_131363092_131363978_131364140_131366163_131366254_131366662
ES.20126.1	chr2	-	2006	2	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	131342690	131340552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131342125_131342256
ES.20127.1	chr2	-	3058	4	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAGCCAGCACTCTCAA	NA	False	NA	NA	False	NA	NA	NA	131366871	131356755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131358362_131362012_131363090_131363976_131364139_131366658
ES.20127.2	chr2	-	6465	2	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAGCCAGCACTCTCAA	NA	False	NA	NA	False	NA	NA	NA	131366871	131356755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131358362_131362012
ES.20127.3	chr2	-	3441	1	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGGAGTAAAACAATTCTAC	NA	False	NA	NA	False	NA	NA	NA	131366872	131363431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131363400_131366900
ES.20127.4	chr2	-	3014	2	Antisense	novelGene_ENSMUSG00000027333.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	131366871	131363450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131366252_131366658
ES.20128.1	chr2	+	3356	1	Intergenic	novelGene_16656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTTTCA	NA	False	NA	NA	False	NA	NA	NA	131374724	131378080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131374700_131378100
ES.20129.1	chr2	+	136	1	Intergenic	novelGene_16657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	131648057	131648193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131648100_131648200
ES.2013.1	chr1	+	1888	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAATAAAAATGGCA	NA	False	NA	NA	False	NA	NA	NA	179077288	179079176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179077300_179079200
ES.20130.1	chr2	+	2168	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	17	-1	3	1	multi-exon	FALSE	canonical	3	54	junction_2	0.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCGGGGTTTGTTCTC	NA	False	NA	8	True	ATTAAA	-18	NA	131751864	131780350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131751924_131754114_131754213_131778339
ES.20131.1	chr2	+	3365	2	FSM	ENSMUSG00000027338.17	ENSMUST00000110172.9	3176	2	-189	0	-188	0	multi-exon	FALSE	canonical	3	15	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792592	131798050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131792836_131794928
ES.20131.2	chr2	+	1980	2	FSM	ENSMUSG00000027338.17	ENSMUST00000110172.9	3176	2	-170	1366	-169	-1366	multi-exon	FALSE	canonical	3	15	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAAATGTTTAAAAATCT	NA	False	NA	NA	False	ATTAAA	-13	NA	131792611	131796684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131792836_131794928
ES.20131.3	chr2	+	2019	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	-82	1	-81	-1	multi-exon	FALSE	canonical	2	3	junction_2	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACGGTGTCTGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	131792699	131798049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131792836_131794928_131795503_131796740
ES.20131.4	chr2	+	1750	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110169.2	1918	3	-53	221	-53	-221	multi-exon	FALSE	canonical	1	3	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGTTTCTCTGCG	NA	False	NA	NA	False	AATACA	-13	NA	131792903	131797829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_131792991_131794928_131795503_131796740
ES.20131.5	chr2	+	3203	2	ISM	ENSMUSG00000027338.17	ENSMUST00000110169.2	1918	3	-47	0	-47	0	intron_retention	FALSE	canonical	1	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792909	131798050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_131792991_131794928
ES.20132.1	chr2	-	3505	1	Antisense	novelGene_ENSMUSG00000027338.17_AS_novelGene_ENSMUSG00000098754.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAATAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	131795103	131791598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_131791600_131795100
ES.20133.1	chr2	-	4724	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	74	3435	74	2	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTGGATCTGCTTTG	NA	False	NA	2	True	AATAAA	-17	NA	131871847	131834769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
ES.20133.10	chr2	-	2955	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	125	5153	125	-1716	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTCTTCCCGTTATCT	NA	False	NA	NA	False	NA	NA	NA	131871796	131836487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
ES.20133.11	chr2	-	2826	1	NIC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	7166	-1450	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCATTGTCCAGCTGG	3899	False	NA	NA	False	NA	NA	NA	131855927	131853101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131853100_131855900
ES.20133.2	chr2	-	4742	11	NIC	ENSMUSG00000027339.16	novel	4589	11	NA	NA	113	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	10.2156742312977	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	0	True	AATAAA	-15	NA	131871808	131834771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871611
ES.20133.4	chr2	-	6003	10	NIC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	108	0	intron_retention	FALSE	canonical	1	8	junction_9	9.14627361211408	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCCTGTGGATCTGCTT	NA	False	NA	0	True	AATAAA	-15	NA	131871813	131834771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
ES.20133.5	chr2	-	4700	11	NNC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	128	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.0494343746637	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCCCCTGTGGATCTGCT	NA	False	NA	-1	True	AATAAA	-14	NA	131871793	131834772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871637
ES.20133.7	chr2	-	3746	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	73	4414	73	-977	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGGGGGTGCTAATCC	NA	False	NA	NA	False	AATAAA	-18	NA	131871848	131835748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
ES.20133.8	chr2	-	3081	11	FSM	ENSMUSG00000027339.16	ENSMUST00000028814.15	8233	11	137	5015	137	-1578	multi-exon	FALSE	canonical	1	8	junction_10	8.85494212290515	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAATATGTGACTGTTG	NA	False	NA	NA	False	NA	NA	NA	131871784	131836349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871670
ES.20133.9	chr2	-	3123	11	NIC	ENSMUSG00000027339.16	novel	8233	11	NA	NA	141	-1591	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	10.2156742312977	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTGTGTAAGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	131871780	131836362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131871611
ES.20134.1	chr2	-	122	1	Intergenic	novelGene_16658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	131873795	131873673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_131873700_131873800
ES.20135.1	chr2	+	208	1	Intergenic	novelGene_16659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTTTAAGCTT	NA	False	NA	NA	False	AGTAAA	-12	NA	131876040	131876248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131876000_131876200
ES.20136.1	chr2	+	2972	16	Intergenic	novelGene_16660	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGCCGCGGAGGGGCGGG	NA	False	NA	NA	False	NA	NA	NA	131897810	131987028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_131898818_131900112_131900215_131902581_131902720_131903977_131904111_131907285_131907389_131908636_131908786_131913230_131913388_131913836_131913957_131917417_131917601_131919348_131919414_131920332_131920420_131931013_131931174_131933132_131933250_131936061_131936159_131943389_131943643_131986927
ES.20137.1	chr2	-	6469	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	-104	-1	-104	1	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTCATTTGCCTCT	7495	False	NA	0	True	AATAAA	-18	NA	131987132	131894414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.11	chr2	-	6484	17	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	5	-2	intron_retention	FALSE	canonical	2	6	junction_16	50.1067610208443	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7604	False	NA	-3	True	AATAAA	-15	NA	131987023	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131973462_131973590_131986931
ES.20137.12	chr2	-	6242	15	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_11	57.2160245856679	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7610	False	NA	-3	True	AATAAA	-15	NA	131987017	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131931015_131931154_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.14	chr2	-	6203	15	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	15	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	45.0360966337004	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7614	False	NA	-3	True	AATAAA	-15	NA	131987013	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902707_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.15	chr2	-	6266	16	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	-21	-2	intron_retention	FALSE	canonical	0	0	junction_15	43.8930012138103	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7578	False	NA	-3	True	AATAAA	-15	NA	131987049	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943534_131986935
ES.20137.16	chr2	-	6209	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_2	44.4242648349126	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7614	False	NA	-3	True	AATAAA	-15	NA	131987013	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131898822_131900119_131900216_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.17	chr2	-	5883	12	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	-15	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	50.6599422824989	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTGTTGTCATTTGCC	7584	False	NA	-3	True	AATAAA	-15	NA	131987043	131894417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917536_131936061_131936161_131943391_131943647_131986931
ES.20137.20	chr2	-	6265	15	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	15	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	44.9693773356846	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTCTGTTGTCATTTGC	7614	False	NA	-4	True	AATAAA	-14	NA	131987013	131894418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.21	chr2	-	6258	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	4	102	4	-102	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAATATTTGGACCAGA	7603	False	NA	-103	True	ATTAAA	-20	NA	131987024	131894517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.22	chr2	-	2946	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	23	3395	23	-477	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTACTTGCGTGTGTTTT	7622	False	NA	NA	False	NA	NA	NA	131987005	131897810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.23	chr2	-	4866	2	Genic_Genomic	ENSMUSG00000027340.16	novel	6364	16	NA	NA	4738	6656	multi-exon	FALSE	canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	131915190	131910097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_131910202_131910428
ES.20137.24	chr2	-	1707	8	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.9532568813036	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATTTAAAACAAA	7604	False	NA	NA	False	NA	NA	NA	131987023	131916770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131917603_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.3	chr2	-	6434	16	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	8023	0	intron_retention	FALSE	canonical	1	4	junction_15	42.9604469250496	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	9655	False	NA	-1	True	AATAAA	-17	NA	131945345	131894415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131945178
ES.20137.4	chr2	-	6455	17	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	51	0	intron_retention	FALSE	canonical	0	0	junction_15	56.4887986684086	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7650	False	NA	-1	True	AATAAA	-17	NA	131986977	131894415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131975064_131975207_131986931
ES.20137.5	chr2	-	6300	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	-25	0	intron_retention	FALSE	canonical	3	13	junction_10	41.8786512267459	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7574	False	NA	-1	True	AATAAA	-17	NA	131987053	131894415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.6	chr2	-	9336	9	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	-4992	-1	intron_retention	TRUE	non_canonical	0	0	junction_6	76.2445694787504	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTTGTCATTTGCCT	NA	False	NA	-2	True	AATAAA	-16	NA	131913952	131894416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131909131_131909308_131910202_131910428_131913388_131913836
ES.20137.7	chr2	-	6324	16	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_2	42.9180096877238	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTTGTCATTTGCCT	7629	False	NA	-2	True	AATAAA	-16	NA	131986998	131894416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900207_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ES.20137.8	chr2	-	6100	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_14	45.2618233510452	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTTGTCATTTGCCT	7607	False	NA	-2	True	AATAAA	-16	NA	131987020	131894416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131986931
ES.20137.9	chr2	-	6897	16	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	11	junction_15	41.3358063776297	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGTTGTCATTTGCCT	7592	False	NA	-2	True	AATAAA	-16	NA	131987035	131894416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986404
ES.20138.1	chr2	-	173	1	Intergenic	novelGene_16661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGAAACAGG	8931	False	NA	NA	False	NA	NA	NA	131998536	131998363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_131998400_131998500
ES.20139.1	chr2	+	177	1	Intergenic	novelGene_16662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132044175	132044352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132044200_132044400
ES.2014.1	chr1	+	538	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179138797	179139335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179138800_179139300
ES.20140.1	chr2	-	170	1	Intergenic	novelGene_16663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGACTGTTCAT	9579	False	NA	NA	False	NA	NA	NA	132046356	132046186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132046200_132046400
ES.20141.1	chr2	+	469	1	Intergenic	novelGene_16664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	132053312	132053781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132053300_132053800
ES.20142.1	chr2	-	1899	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	-5	235	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	289.704483051264	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATTTAACTTTAGGT	4903	False	NA	NA	False	ATTAAA	-26	NA	132089694	132081176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132086062_132087207_132087293_132087875_132087995_132089492
ES.20142.10	chr2	-	1673	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.057588197269	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	-4	True	TATAAA	-18	NA	132089694	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132086062_132087196_132087293_132087875_132087995_132089492
ES.20142.11	chr2	-	1430	3	NIC	ENSMUSG00000027341.11	novel	1551	4	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	43	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGTGTTGTTATT	4903	False	NA	-5	True	TATAAA	-17	NA	132089694	132081414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132087875_132087995_132089515
ES.20142.12	chr2	-	2652	1	NIC	ENSMUSG00000027341.11	novel	2957	3	NA	NA	5508	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGTGTTGTTATT	NA	False	NA	-5	True	TATAAA	-17	NA	132084066	132081414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132081400_132084100
ES.20142.13	chr2	-	1421	4	NNC	ENSMUSG00000027341.11	novel	1551	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	258.458679267865	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGTGTTGTTAT	4922	False	NA	-6	True	TATAAA	-16	NA	132089675	132081415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132086062_132087875_132087995_132089627
ES.20142.14	chr2	-	1459	3	NIC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	306.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGTGTTGTTAT	4896	False	NA	-6	True	TATAAA	-16	NA	132089701	132081415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132087875_132087995_132089492
ES.20142.15	chr2	-	2646	4	NIC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	39	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	270.241044666095	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGTGTGTTGTTA	5062	False	NA	-7	True	TATAAA	-15	NA	132089535	132081416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132085938_132087293_132087875_132087995_132089492
ES.20142.16	chr2	-	4868	2	ISM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	13	5	0	-3	intron_retention	FALSE	canonical	3	576	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTGTGTGTTGTTA	4921	False	NA	-7	True	TATAAA	-15	NA	132089676	132081416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132082547_132085938
ES.20142.17	chr2	-	1100	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	45	467	-3	-465	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCATCTCTAATTGGCT	4915	False	NA	NA	False	AGTAAA	-14	NA	132089682	132081878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ES.20142.18	chr2	-	1080	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	3	468	3	-466	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCCATCTCTAATTGGC	4911	False	NA	NA	False	AGTAAA	-13	NA	132089686	132081879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ES.20142.19	chr2	-	3778	3	NIC	ENSMUSG00000027341.11	novel	2957	3	NA	NA	1	-509	intron_retention	FALSE	canonical	3	26	junction_2	275	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTCCACCTTCAT	4922	False	NA	NA	False	ATTAAA	-18	NA	132089675	132081922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132085938_132087293_132087875
ES.20142.2	chr2	-	2952	2	NIC	ENSMUSG00000027341.11	novel	1531	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	7	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	-4	True	TATAAA	-18	NA	132089694	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132087875
ES.20142.20	chr2	-	1131	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	1	-509	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	294.869462644066	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTCCACCTTCAT	4922	False	NA	NA	False	ATTAAA	-18	NA	132089675	132081922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132083031_132083114_132085938_132086062_132087875_132087995_132089492
ES.20142.21	chr2	-	1140	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	-2	-509	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	289.704483051264	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTCCACCTTCAT	4916	False	NA	NA	False	ATTAAA	-18	NA	132089681	132081922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132086062_132087207_132087293_132087875_132087995_132089492
ES.20142.3	chr2	-	1605	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	5	2	5	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4875	False	NA	-4	True	TATAAA	-18	NA	132089722	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ES.20142.4	chr2	-	3373	3	NIC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	576	junction_1	22	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4921	False	NA	-4	True	TATAAA	-18	NA	132089676	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132082547_132085938_132087995_132089492
ES.20142.5	chr2	-	1489	4	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	277.767288690851	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	-4	True	TATAAA	-18	NA	132089694	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132085974_132087875_132087995_132089492
ES.20142.6	chr2	-	1554	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	-5	2	-5	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4903	False	NA	-4	True	TATAAA	-18	NA	132089694	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ES.20142.7	chr2	-	1498	4	FSM	ENSMUSG00000027341.11	ENSMUST00000180286.2	1531	4	33	0	1	0	multi-exon	FALSE	canonical	3	7	junction_3	263.641591728029	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4922	False	NA	-4	True	TATAAA	-18	NA	132089675	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089552
ES.20142.8	chr2	-	1674	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	289.704483051264	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4891	False	NA	-4	True	TATAAA	-18	NA	132089706	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132082547_132085938_132086062_132087207_132087293_132087875_132087995_132089492
ES.20142.9	chr2	-	3064	3	FSM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	-109	2	-4	0	multi-exon	FALSE	canonical	3	556	junction_2	10	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4914	False	NA	-4	True	TATAAA	-18	NA	132089683	132081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132082547_132085938_132086062_132087875
ES.20143.1	chr2	+	2817	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-591	-5751	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAAACATGGG	NA	False	NA	NA	False	NA	NA	NA	132094685	132097502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_132094700_132097500
ES.20143.11	chr2	+	1712	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	20	6664	20	58	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	5264	False	NA	13	True	AATGAA	-15	NA	132105087	132147306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ES.20143.12	chr2	+	3801	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	32	2293	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	5276	False	NA	20	True	AATAAA	-25	NA	132105099	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147690_132147823
ES.20143.13	chr2	+	3888	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	39	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	150.354374295604	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	5283	False	NA	20	True	AATAAA	-25	NA	132105106	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146494_132146772_132146877_132147072_132147682_132147816
ES.20143.14	chr2	+	3953	15	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	39	2292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.498773688991	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCGTGTTTGTCACTT	5283	False	NA	19	True	AATAAA	-24	NA	132105106	132149540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132121453_132121615_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.16	chr2	+	8220	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.061161563922	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	5285	False	NA	NA	False	AATAAA	-16	NA	132105108	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147671_132147804
ES.20143.17	chr2	+	3773	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-46	2292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCGTGTTTGTCACTT	5291	False	NA	19	True	AATAAA	-24	NA	132105114	132149540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147715_132147860
ES.20143.18	chr2	+	3641	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-45	2287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.467604254304	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGAGTCCCGTGTTTGT	5292	False	NA	14	True	AATAAA	-19	NA	132105115	132149535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.19	chr2	+	5127	15	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	163.005446259332	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	5297	False	NA	NA	False	AATAAA	-16	NA	132105120	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136405_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816_132149564_132152647
ES.20143.2	chr2	+	796	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-564	-7745	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCCCCCCATTTCATA	NA	False	NA	NA	False	AATAAA	-26	NA	132094712	132095508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_132094700_132095500
ES.20143.20	chr2	+	1144	5	NNC	ENSMUSG00000058793.15	novel	1247	4	NA	NA	-40	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	185.549184854043	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTTTCTGAGCCCTT	5297	False	NA	NA	False	AATAAA	-12	NA	132105120	132138109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137732_132137777
ES.20143.21	chr2	+	5778	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-36	2294	intron_retention	FALSE	canonical	0	0	junction_12	122.267551568953	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	5301	False	NA	21	True	AATAAA	-26	NA	132105124	132149542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.23	chr2	+	3768	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-30	2290	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCCCGTGTTTGTCAC	5307	False	NA	17	True	AATAAA	-22	NA	132105130	132149538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147717_132147849
ES.20143.26	chr2	+	7571	15	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	145.975623489202	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	5311	False	NA	NA	False	AATAAA	-15	NA	132105134	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816_132151430_132152050
ES.20143.27	chr2	+	8181	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-17	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	118.061161563922	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGATTGTGCGTGTTTT	5320	False	NA	NA	False	AATAAA	-12	NA	132105143	132153965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147698_132147831
ES.20143.28	chr2	+	6502	12	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	4	2282	intron_retention	FALSE	canonical	0	0	junction_11	127.247984607918	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCAGGAGTCCCGTG	5341	False	NA	9	True	AATAAA	-14	NA	132105164	132149530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.29	chr2	+	3570	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	16	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	154.383631112743	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	5353	False	NA	20	True	AATAAA	-25	NA	132105176	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.3	chr2	+	3189	2	NNC	ENSMUSG00000087377.2	novel	921	2	NA	NA	-559	-5125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATATTTGTGAGAATTT	NA	False	NA	NA	False	NA	NA	NA	132094717	132098128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132097489_132097710
ES.20143.30	chr2	+	4402	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	42	2998	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.061161563922	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGACTGTGGAACCGTT	5379	False	NA	NA	False	AATATA	-17	NA	132105202	132150246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.32	chr2	+	8117	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	54	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	5391	False	NA	NA	False	AATAAA	-15	NA	132105214	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147706_132147835
ES.20143.33	chr2	+	3667	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	57	2287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGAGTCCCGTGTTTGT	5394	False	NA	14	True	AATAAA	-19	NA	132105217	132149535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147706_132147849
ES.20143.35	chr2	+	8096	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	67	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	5404	False	NA	NA	False	AATAAA	-15	NA	132105227	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147731_132147868
ES.20143.36	chr2	+	3608	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	67	2290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	149.534346255498	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCCCGTGTTTGTCAC	5404	False	NA	17	True	AATAAA	-22	NA	132105227	132149538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144113_132146299_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.37	chr2	+	2085	4	NNC	ENSMUSG00000058793.15	novel	1247	4	NA	NA	69	-4	intron_retention	FALSE	canonical	0	0	junction_3	178.389710714741	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTTTCTGAGCCCTT	5406	False	NA	NA	False	AATAAA	-12	NA	132105229	132138109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132137732_132137777
ES.20143.38	chr2	+	3654	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	89	2294	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	5426	False	NA	21	True	AATAAA	-26	NA	132105249	132149542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147706_132147837
ES.20143.39	chr2	+	3646	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	92	2288	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGAGTCCCGTGTTTGTC	5429	False	NA	15	True	AATAAA	-20	NA	132105252	132149536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147773_132147903
ES.20143.4	chr2	+	2479	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-546	-6044	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATACAATTTTTTTAAAA	-1	True	NA	NA	False	NA	NA	NA	132094730	132097209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_132094700_132097200
ES.20143.40	chr2	+	11672	12	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	93	-1	intron_retention	FALSE	canonical	0	0	junction_11	125.935966937944	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	5430	False	NA	NA	False	AATAAA	-16	NA	132105253	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132139285_132139553_132139613_132140388_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.41	chr2	+	4983	15	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	99	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	145.975623489202	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTAGATTGTGCGTGT	5436	False	NA	NA	False	AATAAA	-9	NA	132105259	132153962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816_132149564_132152641
ES.20143.44	chr2	+	3547	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	177	2286	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	150.90096285881	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGAGTCCCGTGTTTG	5514	False	NA	13	True	AATAAA	-18	NA	132105337	132149534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147079_132147706_132147841
ES.20143.45	chr2	+	3612	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	369	2292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	150.015304939117	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCGTGTTTGTCACTT	5706	False	NA	19	True	AATAAA	-24	NA	132105529	132149540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105661_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.46	chr2	+	3570	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-61	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132127797	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.48	chr2	+	3467	13	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-48	2292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	162.684318543614	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCGTGTTTGTCACTT	NA	False	NA	19	True	AATAAA	-24	NA	132127810	132149540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142542_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.49	chr2	+	1456	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	-47	6664	-47	58	multi-exon	FALSE	canonical	2	123	junction_1	89.520132744912	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	NA	False	NA	13	True	AATGAA	-15	NA	132127811	132147306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ES.20143.5	chr2	+	3672	14	Fusion	ENSMUSG00000058793.15_ENSMUSG00000087377.2	novel	627	5	NA	NA	-16	2294	multi-exon	TRUE	canonical	0	0	junction_13	150.015304939117	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	529	False	NA	21	True	AATAAA	-26	NA	132095260	132149542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_132095450_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.50	chr2	+	4252	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-41	2995	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGGACTGTGGAACC	NA	False	NA	NA	False	AATATA	-14	NA	132127817	132150243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.51	chr2	+	5541	13	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-31	2292	intron_retention	FALSE	canonical	0	0	junction_12	135.9829186577	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCGTGTTTGTCACTT	NA	False	NA	19	True	AATAAA	-24	NA	132127827	132149540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.52	chr2	+	3536	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-28	2291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	131.49004957066	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCCCGTGTTTGTCACT	NA	False	NA	18	True	AATAAA	-23	NA	132127830	132149539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147690_132147823
ES.20143.53	chr2	+	7961	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132127834	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.54	chr2	+	3516	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-16	2284	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	131.49004957066	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGGAGTCCCGTGTT	NA	False	NA	11	True	AATAAA	-16	NA	132127842	132149532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147715_132147849
ES.20143.55	chr2	+	3478	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	-7	2282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	158.226412564831	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCAGGAGTCCCGTG	NA	False	NA	9	True	AATAAA	-14	NA	132127851	132149530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146305_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.56	chr2	+	3513	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	0	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.49004957066	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132127858	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147773_132147903
ES.20143.57	chr2	+	5311	14	NNC	ENSMUSG00000058793.15	novel	8073	13	NA	NA	0	2289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	175.923665533306	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCCCGTGTTTGTCA	NA	False	NA	16	True	AATAAA	-21	NA	132127858	132149537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132140715_132142562_132143103_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.6	chr2	+	516	2	FSM	ENSMUSG00000087377.2	ENSMUST00000124336.2	921	2	-11	416	-11	-416	multi-exon	FALSE	canonical	3	32	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCATGGTTTCTAGAAT	534	False	NA	NA	False	NA	NA	NA	132095265	132102837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132095450_132102505
ES.20143.60	chr2	+	3558	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3414	2295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.186787055044	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTGTTTGTCACTTGTT	NA	False	NA	22	True	AATAAA	-27	NA	132131272	132149543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.62	chr2	+	7966	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3432	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.186787055044	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132131290	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.63	chr2	+	3719	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3446	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.186787055044	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132131304	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131542_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.65	chr2	+	1406	13	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3462	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.581213686209	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGTCATTTTTTTTTC	NA	False	NA	11	True	AATGAA	-13	NA	132131320	132147304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ES.20143.68	chr2	+	10502	12	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3462	-27	intron_retention	FALSE	non_canonical	0	0	junction_1	159.594423979315	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAAACATATACTA	NA	False	NA	NA	False	NA	NA	NA	132131320	132153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.69	chr2	+	7992	15	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3462	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.610459997267	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132131320	132153970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132140715_132140771_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.7	chr2	+	5374	18	Fusion	ENSMUSG00000058793.15_ENSMUSG00000087377.2	novel	627	5	NA	NA	0	2294	multi-exon	TRUE	canonical	0	0	junction_2	191.161736988816	545	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	545	False	NA	21	True	AATAAA	-26	NA	132095276	132149542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_132095450_132102505_132103887_132104608_132104686_132121453_132121615_132122463_132122563_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.71	chr2	+	7932	14	NNC	ENSMUSG00000058793.15	novel	627	5	NA	NA	3466	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	150.186787055044	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	132131324	132153970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132131347_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147700_132147835
ES.20143.72	chr2	+	3483	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	7305	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.581213686209	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132135163	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.73	chr2	+	7911	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	7305	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.581213686209	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132135163	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.74	chr2	+	7718	12	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-6899	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	158.438454302145	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132136316	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132136401_132137450_132137549_132139144_132139243_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.75	chr2	+	3498	13	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-6875	2293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	175.972456809455	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132136340	132149541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132141314_132141505_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.77	chr2	+	4382	4	NIC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-2987	58	intron_retention	FALSE	canonical	3	376	junction_3	15.5205956357638	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTCATTTTTTTTTCTT	NA	False	NA	13	True	AATGAA	-15	NA	132140228	132147306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132144153_132146278_132146399_132146772_132146877_132147072
ES.20143.78	chr2	+	7380	8	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	-2828	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	140.087581934463	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132140387	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.79	chr2	+	4421	6	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	820	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	193.719797645981	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCGTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	132144035	132153969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132144153_132146278_132146399_132146772_132146877_132147072_132147701_132147835_132149954_132152635
ES.20143.8	chr2	+	3826	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	7	2294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.061161563922	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGTTTGTCACTTGT	5251	False	NA	21	True	AATAAA	-26	NA	132105074	132149542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20143.81	chr2	+	4418	4	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	3557	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	177.248099817428	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	132146772	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132146877_132147072_132147682_132147816_132150195_132152641
ES.20143.82	chr2	+	6400	2	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	4218	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	132147433	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132147715_132147849
ES.20143.83	chr2	+	1826	2	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	4360	2286	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGAGTCCCGTGTTTG	NA	False	NA	13	True	AATAAA	-18	NA	132147575	132149534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132147765_132147897
ES.20143.84	chr2	+	3738	3	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	4436	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTGCGTGTTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	132147651	132153968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132147748_132147882_132150192_132152635
ES.20143.9	chr2	+	8255	14	NNC	ENSMUSG00000058793.15	novel	8396	13	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.061161563922	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCGTGTTTTTTGATGG	5252	False	NA	NA	False	AATAAA	-19	NA	132105075	132153972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072_132147682_132147816
ES.20144.1	chr2	-	3538	4	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	139	-2	intron_retention	FALSE	canonical	3	1968	junction_1	237.64025098642	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACGTTGTGCAAAGTTT	8364	False	NA	-12	True	AATAAA	-25	NA	132095095	132091083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132093359_132093610_132093679_132093822
ES.20144.10	chr2	-	3929	1	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	99	-125	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8324	False	NA	-4	True	AATAAA	-20	NA	132095135	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091200_132095100
ES.20144.11	chr2	-	3081	2	FSM	ENSMUSG00000027342.15	ENSMUST00000135181.2	824	2	-215	-2042	132	-125	multi-exon	FALSE	canonical	3	2527	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8357	False	NA	-4	True	AATAAA	-20	NA	132095102	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132093921_132094735
ES.20144.12	chr2	-	2672	5	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	67	-125	intron_retention	FALSE	canonical	3	1968	junction_1	228.570968191501	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8292	False	NA	-4	True	AATAAA	-20	NA	132095167	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.13	chr2	-	1406	5	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	131	-125	intron_retention	FALSE	canonical	3	1968	junction_1	255.024508626132	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8356	False	NA	-4	True	AATAAA	-20	NA	132095103	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093921_132094735
ES.20144.14	chr2	-	1212	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	104	-125	at_least_one_novel_splicesite	FALSE	canonical	1	57	junction_1	943.988262638895	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8329	False	NA	-4	True	AATAAA	-20	NA	132095130	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091770_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.15	chr2	-	1221	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	88	-125	at_least_one_novel_splicesite	FALSE	canonical	3	210	junction_2	881.92298983528	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8313	False	NA	-4	True	AATAAA	-20	NA	132095146	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132091818_132093247_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.16	chr2	-	1180	6	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	-73	-125	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	901.923721830178	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	2	True	NA	-4	True	AATAAA	-20	NA	132094595	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094309
ES.20144.17	chr2	-	2716	4	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	101	-125	intron_retention	FALSE	canonical	3	2404	junction_2	56.4052795007307	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8326	False	NA	-4	True	AATAAA	-20	NA	132095133	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.18	chr2	-	1248	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	139	-125	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	919.018041172207	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8364	False	NA	-4	True	AATAAA	-20	NA	132095095	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132091818_132093163_132093353_132093610_132093679_132093822_132093921_132094735
ES.20144.19	chr2	-	2945	3	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	124	-125	intron_retention	FALSE	canonical	3	2404	junction_1	61.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8349	False	NA	-4	True	AATAAA	-20	NA	132095110	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132093679_132093822_132093921_132094735
ES.20144.2	chr2	-	1375	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	137	6	137	-6	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATTACGTTGTGCAAA	8362	False	NA	-16	True	AATAAA	-21	NA	132095097	132091087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.22	chr2	-	2074	5	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	132	127	132	-127	intron_retention	FALSE	canonical	3	1968	junction_1	228.320361553673	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGAGCAGTGCCGCCTT	8357	False	NA	-6	True	AATAAA	-18	NA	132095102	132091208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822
ES.20144.23	chr2	-	3635	2	NIC	ENSMUSG00000027342.15	novel	589	5	NA	NA	139	-127	intron_retention	FALSE	canonical	3	2520	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGAGCAGTGCCGCCTT	8364	False	NA	-6	True	AATAAA	-18	NA	132095095	132091208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132093359_132093610
ES.20144.24	chr2	-	2499	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	133	-127	intron_retention	FALSE	canonical	0	0	junction_5	963.831603549085	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGAGCAGTGCCGCCTT	8358	False	NA	-6	True	AATAAA	-18	NA	132095101	132091208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132093359_132093610_132093679_132093822_132093921_132094735_132094810_132094914
ES.20144.25	chr2	-	3499	3	NIC	ENSMUSG00000027342.15	novel	589	5	NA	NA	131	-127	intron_retention	FALSE	canonical	3	2404	junction_2	58	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGAGCAGTGCCGCCTT	8356	False	NA	-6	True	AATAAA	-18	NA	132095103	132091208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132093359_132093610_132093679_132093822
ES.20144.26	chr2	-	1277	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	104	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	963.831603549085	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGAGCAGTGCCGCCTT	8329	False	NA	-6	True	AATAAA	-18	NA	132095130	132091208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132091818_132093173_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.27	chr2	-	1231	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	117	-132	at_least_one_novel_splicesite	FALSE	canonical	2	116	junction_1	920.767375616665	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCATAGAGCAGTGCC	8342	False	NA	-11	True	AATAAA	-13	NA	132095117	132091213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091578_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.28	chr2	-	1116	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	85	317	85	-317	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACCTACTTTCTTTTC	8310	False	NA	NA	False	AATAAA	-20	NA	132095149	132091398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.3	chr2	-	1338	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	57	123	57	-123	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTGCCGCCTTTGTA	8282	False	NA	-2	True	AATAAA	-22	NA	132095177	132091204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.30	chr2	-	969	6	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	-54	-317	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	901.923721830178	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACCTACTTTCTTTTC	8883	False	NA	NA	False	AATAAA	-20	NA	132094576	132091398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094309
ES.20144.31	chr2	-	1071	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	123	-318	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	956.984304991467	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAACCTACTTTCTTTT	8348	False	NA	NA	False	AATAAA	-19	NA	132095111	132091399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091610_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.32	chr2	-	2699	4	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	99	-318	intron_retention	FALSE	canonical	3	1968	junction_1	239.839298049525	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAACCTACTTTCTTTT	8324	False	NA	NA	False	AATAAA	-19	NA	132095135	132091399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132093679_132093822_132093921_132094735
ES.20144.5	chr2	-	1254	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	133	-125	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	956.984304991467	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8358	False	NA	-4	True	AATAAA	-20	NA	132095101	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091610_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ES.20144.6	chr2	-	1208	7	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	84	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	882.556828513357	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8309	False	NA	-4	True	AATAAA	-20	NA	132095150	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735_132094976_132095076
ES.20144.7	chr2	-	2919	4	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	72	-125	intron_retention	FALSE	canonical	3	1968	junction_1	239.839298049525	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8297	False	NA	-4	True	AATAAA	-20	NA	132095162	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132091616_132091693_132093679_132093822_132093921_132094735
ES.20144.9	chr2	-	1166	7	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	139	-125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	882.556828513357	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8364	False	NA	-4	True	AATAAA	-20	NA	132095095	132091206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735_132094992_132095079
ES.20145.1	chr2	-	2563	1	Intergenic	novelGene_16665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAGATTTTAAAATTT	9712	False	NA	NA	False	NA	NA	NA	132110433	132107870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132107900_132110400
ES.20145.2	chr2	-	178	1	Intergenic	novelGene_16666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAGAAGAA	9882	False	NA	NA	False	NA	NA	NA	132108639	132108461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132108500_132108600
ES.20146.1	chr2	-	178	1	Intergenic	novelGene_16667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATCTATTTT	7486	False	NA	NA	False	NA	NA	NA	132121215	132121037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132121000_132121200
ES.20146.2	chr2	-	178	2	Antisense	novelGene_ENSMUSG00000058793.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAAATCTATTT	NA	False	NA	NA	False	NA	NA	NA	132131033	132121038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_132121071_132130887
ES.20146.3	chr2	-	180	1	Intergenic	novelGene_16668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGATTCTACCTTG	NA	False	NA	NA	False	NA	NA	NA	132131035	132130855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132130900_132131000
ES.20147.1	chr2	-	145	1	Intergenic	novelGene_16669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	132132098	132131953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132132000_132132100
ES.20148.1	chr2	+	3479	16	Antisense	novelGene_ENSMUSG00000027346.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTGTGCAGGAATGTC	NA	False	NA	NA	False	NA	NA	NA	132376690	132416096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_132376753_132377280_132377418_132378603_132378669_132379999_132380064_132381818_132381861_132382206_132382286_132384163_132384257_132386310_132386366_132388759_132388894_132389476_132389639_132392232_132392477_132395878_132396001_132398854_132398897_132406546_132406636_132410542_132410635_132414099
ES.20148.2	chr2	+	185	1	Intergenic	novelGene_16670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTTTTGGAA	NA	False	NA	NA	False	NA	NA	NA	132381425	132381610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132381400_132381600
ES.20148.3	chr2	+	170	1	Intergenic	novelGene_16671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132412732	132412902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132412700_132412900
ES.20149.1	chr2	-	3534	19	FSM	ENSMUSG00000027346.16	ENSMUST00000145694.8	3577	19	43	0	12	0	multi-exon	FALSE	canonical	0	0	junction_13	23.6976844209214	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420125	132371001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.10	chr2	-	5152	1	NIC	ENSMUSG00000027346.16	novel	4356	7	NA	NA	3892	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	9286	False	NA	-2	True	NA	NA	NA	132376155	132371003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132371000_132376200
ES.20149.11	chr2	-	7680	16	ISM	ENSMUSG00000027346.16	ENSMUST00000110136.8	3546	19	15091	2	15037	-1	3prime_fragment	FALSE	canonical	3	67	junction_10	12.8450595777348	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	NA	False	NA	-2	True	NA	NA	NA	132405016	132371003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526
ES.20149.12	chr2	-	3493	18	NIC	ENSMUSG00000027346.16	novel	3612	19	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	27.0745478608325	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	NA	False	NA	-2	True	NA	NA	NA	132420135	132371003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132414104_132414175_132419987
ES.20149.14	chr2	-	3495	18	NIC	ENSMUSG00000027346.16	novel	3612	19	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	28.2862285687505	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGGCTTCCTGATTT	NA	False	NA	-3	True	NA	NA	NA	132420111	132371004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132419987
ES.20149.16	chr2	-	3318	20	NNC	ENSMUSG00000027346.16	novel	3686	20	NA	NA	-6325	-317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.1173144815229	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTCAAGAAGGTATT	NA	False	NA	NA	False	AATAAA	-33	NA	132435974	132371319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388898_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132435862
ES.20149.17	chr2	-	3377	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	-9	318	4	-317	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTCAAGAAGGTATT	NA	False	NA	NA	False	AATAAA	-33	NA	132420162	132371319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.18	chr2	-	3091	18	FSM	ENSMUSG00000027346.16	ENSMUST00000148833.8	3431	18	18	322	18	-321	multi-exon	FALSE	canonical	0	0	junction_13	27.729539044855	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAATTTCAAGAAGG	NA	False	NA	NA	False	AATAAA	-29	NA	132420080	132371323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.2	chr2	-	3568	19	FSM	ENSMUSG00000027346.16	ENSMUST00000149854.8	3612	19	44	0	-4	0	multi-exon	TRUE	canonical	3	23	junction_15	20.2402239776804	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420111	132371001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.20	chr2	-	3105	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	73	508	18	-507	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTATTCTTTATTGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	132420080	132371509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.22	chr2	-	3086	20	NNC	ENSMUSG00000027346.16	novel	3686	20	NA	NA	9	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.291931401501	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTGGTATTCTTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	132420089	132371514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132405171_132405225_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.23	chr2	-	3116	19	FSM	ENSMUSG00000027346.16	ENSMUST00000149854.8	3612	19	-17	513	-4	-512	multi-exon	FALSE	canonical	3	23	junction_15	20.2402239776804	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTGGTATTCTTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	132420172	132371514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.24	chr2	-	3352	19	ISM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	23	3642	7	2	5prime_fragment	FALSE	canonical	3	65	junction_15	14.6118504248951	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGTCTAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	132420130	132374643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.25	chr2	-	1965	19	ISM	ENSMUSG00000027346.16	ENSMUST00000110142.8	3703	20	116	4953	1	116	5prime_fragment	FALSE	canonical	3	30	junction_18	19.5632087297168	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTATAGTAGTTTTTA	NA	False	NA	NA	False	CATAAA	-21	NA	132420052	132375955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
ES.20149.26	chr2	-	5972	4	ISM	ENSMUSG00000027346.16	ENSMUST00000148833.8	3431	18	27	29909	-18	-4922	5prime_fragment	FALSE	canonical	3	81	junction_3	12.8322510366134	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAACCACAAAGTATTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	132420071	132400910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.3	chr2	-	3674	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	11	1	-5	0	multi-exon	FALSE	canonical	3	65	junction_16	14.3132737727671	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420142	132371002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.4	chr2	-	3607	19	NNC	ENSMUSG00000027346.16	novel	3612	19	NA	NA	-6377	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	27.9997795405783	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132436026	132371002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132435862
ES.20149.5	chr2	-	3912	22	NNC	ENSMUSG00000027346.16	novel	3686	20	NA	NA	-6353	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	33.0549600739061	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132436002	132371002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132429540_132429711_132431359_132431443_132435862
ES.20149.7	chr2	-	3436	18	FSM	ENSMUSG00000027346.16	ENSMUST00000148833.8	3431	18	-6	1	3	0	multi-exon	FALSE	canonical	0	0	junction_13	27.729539044855	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	False	NA	-1	True	NA	NA	NA	132420104	132371002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ES.20149.8	chr2	-	3547	19	NIC	ENSMUSG00000027346.16	novel	3703	20	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	27.3579947463846	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	NA	False	NA	-2	True	NA	NA	NA	132420068	132371003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
ES.20149.9	chr2	-	3984	5	NNC	ENSMUSG00000027346.16	novel	4356	7	NA	NA	-1330	-1	intron_retention	FALSE	canonical	0	0	junction_3	36.3756443241903	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTCCTGATTTG	4064	False	NA	-2	True	NA	NA	NA	132381377	132371003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132372663_132375993_132376155_132376617_132377340_132378604_132378671_132380001
ES.2015.1	chr1	-	3365	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCCACCAAACCAAAACA	NA	False	NA	NA	False	NA	NA	NA	179145017	179141652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179141700_179145000
ES.20150.1	chr2	+	160	1	Intergenic	novelGene_16672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	132464217	132464377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132464200_132464400
ES.20151.1	chr2	+	1220	4	Fusion	ENSMUSG00000074783.11_ENSMUSG00000044991.11	novel	1076	3	NA	NA	1639	-1	multi-exon	TRUE	canonical	0	0	junction_1	36.7695526217005	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGACTCAGTCTATTT	NA	False	NA	26	True	NA	NA	NA	132489439	132592974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_132489536_132489885_132489986_132533869_132534052_132592132
ES.20151.2	chr2	+	353	1	Intergenic	novelGene_16674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	132525836	132526189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132525800_132526200
ES.20151.3	chr2	+	172	1	Intergenic	novelGene_16675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTCTG	NA	False	NA	NA	False	NA	NA	NA	132525837	132526009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_132525800_132526000
ES.20151.4	chr2	+	2157	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	35	-53193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGACTGGAAGTTACA	NA	False	NA	NA	False	TATAAA	-16	NA	132528885	132539230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132528902_132533869_132534052_132537271
ES.20151.5	chr2	+	3959	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	596	1713	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCAGCTCAGGCCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	132532798	132594688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132534052_132572619_132572770_132592132
ES.20151.6	chr2	+	1079	3	NNC	ENSMUSG00000044991.11	novel	1076	3	NA	NA	1724	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGACTCAGTCTATTT	NA	False	NA	26	True	NA	NA	NA	132533926	132592974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132534052_132551435_132551548_132592132
ES.20152.1	chr2	-	405	1	Intergenic	novelGene_16673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAAAACAAAACGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	132517221	132516816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132516800_132517200
ES.20153.1	chr2	-	158	1	Intergenic	novelGene_16676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	132535811	132535653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132535700_132535800
ES.20154.1	chr2	+	3267	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	-67	-21	-67	21	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCATTCATTTTTAACT	NA	False	NA	23	True	ATTAAA	-35	NA	132657993	132685836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.10	chr2	+	5395	17	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	18	-188	intron_retention	FALSE	canonical	3	135	junction_5	20.222106560643	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGAGTAAATTGTTTC	NA	False	NA	36	True	AATAAA	-28	NA	132658078	132685627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.11	chr2	+	2806	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	24	-235	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_17	38.3679392909249	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCCTATAACAGAATAAA	NA	False	NA	7	True	AATAAA	-19	NA	132658084	132685580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684636_132684713_132685394
ES.20154.12	chr2	+	2949	18	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	24	-199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	44.5435131918672	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAGAAGAGTAAGAAGAG	NA	False	NA	25	True	AATAAA	-17	NA	132658084	132685616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132674658_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.13	chr2	+	6344	17	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	24	-11	intron_retention	FALSE	canonical	3	131	junction_1	21.9899657514513	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	132658084	132686106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.14	chr2	+	3158	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	33	-202	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	54.6884836772202	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATCCAGAAGAGTAAGAA	NA	False	NA	22	True	AATAAA	-14	NA	132658093	132685613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132659973_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680675_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.15	chr2	+	5393	18	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	37	135	intron_retention	FALSE	canonical	3	131	junction_1	21.5536668256985	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGGTGTTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	132658097	132686252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.16	chr2	+	3252	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	39	-193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.553571383377	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGAAGAGTAAATT	NA	False	NA	31	True	AATAAA	-23	NA	132658099	132685622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132660014_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.17	chr2	+	3418	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	40	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.710502452973	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	132658100	132686106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663359_132665096_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.18	chr2	+	4701	18	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	41	-193	intron_retention	FALSE	canonical	0	0	junction_16	55.1021699658743	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGAAGAGTAAATT	NA	False	NA	31	True	AATAAA	-23	NA	132658101	132685622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680675_132680846_132681373_132681584_132682663_132682741_132684530_132684713_132685394
ES.20154.19	chr2	+	3779	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.1193076400587	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAGAAGAAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	132658102	132686116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658727_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.2	chr2	+	3012	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	-20	187	-20	-187	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGTAAATTGTTTCC	NA	False	NA	37	True	AATAAA	-29	NA	132658040	132685628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.20	chr2	+	3146	19	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	21	-193	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	41.7578631613552	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGAAGAGTAAATT	NA	False	NA	31	True	AATAAA	-23	NA	132658164	132685622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132659973_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.21	chr2	+	4663	16	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	74	-1	intron_retention	FALSE	canonical	3	9	junction_9	45.242850877852	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGTTCAGGTCACAAA	NA	False	NA	1	True	ATTAAA	-13	NA	132658217	132685814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.22	chr2	+	4940	17	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	848	0	intron_retention	FALSE	canonical	3	135	junction_6	17.2281337860489	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	132658991	132686117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132684713_132685394
ES.20154.23	chr2	+	3869	17	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	944	-239	intron_retention	FALSE	canonical	3	9	junction_2	43.4564706775642	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAACTCCTATAACAGAA	NA	False	NA	3	True	AATAAA	-15	NA	132659087	132685576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132659166_132659624_132659973_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.24	chr2	+	4041	14	NIC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	1519	-1	intron_retention	FALSE	canonical	0	0	junction_10	48.3411202324216	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGTTCAGGTCACAAA	NA	False	NA	1	True	ATTAAA	-13	NA	132659662	132685814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.25	chr2	+	4262	16	ISM	ENSMUSG00000027353.15	ENSMUST00000066559.6	3397	18	2089	11	2006	-11	3prime_fragment	FALSE	canonical	3	135	junction_4	20.5927711156663	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	132660149	132686106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.27	chr2	+	2090	13	NNC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	3756	-202	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	64.9121200804082	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATCCAGAAGAGTAAGAA	NA	False	NA	22	True	AATAAA	-14	NA	132661899	132685613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132676657_132676800_132680006_132680203_132680675_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.28	chr2	+	3724	8	NNC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	14362	0	intron_retention	FALSE	canonical	2	4	junction_3	65.5111767999498	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTCAGGTCACAAAA	NA	False	NA	2	True	ATTAAA	-14	NA	132672505	132685815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132674824_132676657_132676800_132680006_132680203_132680675_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.29	chr2	+	1541	9	NNC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	15215	-246	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	61.7105136909425	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACACAACTCCTAT	NA	False	NA	-4	True	AATAAA	-8	NA	132673358	132685569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680675_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.3	chr2	+	4632	16	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	-9	-198	intron_retention	FALSE	canonical	3	9	junction_9	45.242850877852	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAAGAGTAAGAAGAGT	NA	False	NA	26	True	AATAAA	-18	NA	132658051	132685617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.30	chr2	+	3422	8	NIC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	15426	14	intron_retention	FALSE	canonical	3	148	junction_4	16.8728740157396	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAACTCTTCATTCATT	NA	False	NA	16	True	ATTAAA	-28	NA	132673569	132685829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132684713_132685394
ES.20154.31	chr2	+	5253	4	NIC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	18629	-246	intron_retention	FALSE	canonical	3	174	junction_3	19.6015872373189	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACACAACTCCTAT	NA	False	NA	-4	True	AATAAA	-8	NA	132676772	132685569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.32	chr2	+	2209	2	ISM	ENSMUSG00000027353.15	ENSMUST00000066559.6	3397	18	25779	-613	25696	613	3prime_fragment	FALSE	canonical	3	174	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132683839	132686730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_132684713_132685394
ES.20154.4	chr2	+	3303	17	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	-5	-11	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	43.9871696492284	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	132658055	132686106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.5	chr2	+	3791	19	NNC	ENSMUSG00000027353.15	novel	3397	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.553571383377	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	132658055	132686117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132658386_132658993_132659166_132659624_132660014_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.6	chr2	+	3480	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	1	-302	1	0	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	132658061	132686117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.7	chr2	+	3622	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	1	-444	1	142	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCCTCTGTGCCTCA	NA	False	NA	NA	False	AATAAA	-28	NA	132658061	132686259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.8	chr2	+	4793	18	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	7	-193	intron_retention	FALSE	canonical	3	131	junction_1	21.5536668256985	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGAAGAGTAAATT	NA	False	NA	31	True	AATAAA	-23	NA	132658067	132685622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20154.9	chr2	+	4986	18	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	10	3	intron_retention	FALSE	canonical	3	131	junction_1	21.5536668256985	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCAGGTCACAAAAACT	NA	False	NA	5	True	ATTAAA	-17	NA	132658070	132685818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ES.20155.1	chr2	-	2871	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	-31	-12	-30	12	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCTGCATTTATTACA	NA	False	NA	0	True	AATAAA	-35	NA	132658005	132646114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.10	chr2	-	5224	3	NIC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	134	-7	intron_retention	FALSE	canonical	3	339	junction_1	4	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAAGTCATTAATGATA	NA	False	NA	-19	True	AATAAA	-16	NA	132652421	132646133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132650937_132651748_132651874_132652125
ES.20155.11	chr2	-	2922	12	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	142.860620973008	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATAAGTCATTAATGAT	NA	False	NA	-20	True	AATAAA	-15	NA	132657933	132646134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132654856_132655000_132657723
ES.20155.12	chr2	-	3264	10	NIC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	339	junction_5	32.5033711451977	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATAAGTCATTAATGAT	NA	False	NA	-20	True	AATAAA	-15	NA	132657938	132646134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132653019_132653967_132654096_132657723
ES.20155.13	chr2	-	2994	11	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	115.942270117503	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATAAGTCATTAATGAT	NA	False	NA	-20	True	AATAAA	-15	NA	132657923	132646134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652654_132652908_132653019_132653967_132654096_132657723
ES.20155.14	chr2	-	3987	9	NIC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	14	-10	intron_retention	FALSE	canonical	3	347	junction_4	31.1646334006996	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATAAGTCATTAATG	NA	False	NA	-22	True	AATAAA	-13	NA	132657960	132646136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.15	chr2	-	4605	7	NIC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	-20	-10	intron_retention	FALSE	canonical	3	339	junction_5	36.5224436324966	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATAAGTCATTAATG	NA	False	NA	-22	True	AATAAA	-13	NA	132657953	132646136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132654096_132657723
ES.20155.16	chr2	-	3889	10	NIC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	-14	-10	intron_retention	FALSE	canonical	3	339	junction_4	32.630743664507	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATAAGTCATTAATG	NA	False	NA	-22	True	AATAAA	-13	NA	132657947	132646136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.17	chr2	-	3082	11	NIC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	-13	-10	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	143.75746937116	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATAAGTCATTAATG	NA	False	NA	-22	True	AATAAA	-13	NA	132657946	132646136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657550
ES.20155.18	chr2	-	2797	11	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	117.364432431636	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCATAAGTCATTAATG	NA	False	NA	-22	True	AATAAA	-13	NA	132657933	132646136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648738_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.19	chr2	-	3086	11	NNC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	13	-73	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	150.070283534083	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTTTTTATTCCTT	NA	False	NA	-12	True	GATAAA	-17	NA	132657961	132646199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652654_132652908_132653019_132653967_132654096_132657723
ES.20155.2	chr2	-	2947	11	FSM	ENSMUSG00000037376.15	ENSMUST00000147336.8	2948	11	1	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	111.30929880293	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657974	132646126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.20	chr2	-	2741	12	NNC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	-13	-73	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	144.515377087963	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGTTTTTATTCCTT	NA	False	NA	-12	True	GATAAA	-17	NA	132657946	132646199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647194_132647298_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.21	chr2	-	2338	9	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	4954	113	-465	-113	3prime_fragment	FALSE	canonical	3	339	junction_5	16.6789538041209	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTTGTGCTGTTCTGA	NA	False	NA	-52	True	GATAAA	-12	NA	132653020	132646239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908
ES.20155.22	chr2	-	2583	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	18	227	18	-227	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCTTGTTCCCTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	132657956	132646353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.23	chr2	-	2476	12	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	19	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.954761904604	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAAGGCTCTTGTTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	132657955	132646358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647194_132647298_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652332_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.24	chr2	-	2407	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	13	408	13	-408	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGGTGTGTTGCTGT	NA	False	NA	NA	False	AATACA	-42	NA	132657961	132646534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.25	chr2	-	2220	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	43	565	2	-565	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACACAGACACACAGAAAC	NA	False	NA	NA	False	ATTAAA	-22	NA	132657931	132646691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.26	chr2	-	1370	9	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	51	2604	10	-2604	5prime_fragment	FALSE	canonical	3	339	junction_3	34.4834652406048	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCCCTTAGCCTTTGT	NA	False	NA	NA	False	AATATA	-16	NA	132657923	132648730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.27	chr2	-	816	1	Genic_Genomic	ENSMUSG00000037376.15	novel	NA	NA	NA	NA	-44	-3220	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	132657722	132656906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_132656900_132657700
ES.20155.4	chr2	-	2896	11	NNC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	151.033142058291	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCATTAATGATACAAT	NA	False	NA	-15	True	AATAAA	-20	NA	132657938	132646129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652348_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.6	chr2	-	2791	11	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	116.781676644926	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTCATTAATGATACAA	NA	False	NA	-16	True	AATAAA	-19	NA	132657947	132646130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650204_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20155.7	chr2	-	2976	11	NIC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	110.380659537801	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTCATTAATGATACAA	NA	False	NA	-16	True	AATAAA	-19	NA	132657953	132646130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657550
ES.20155.8	chr2	-	2702	12	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	111.387344415188	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTCATTAATGATACAA	NA	False	NA	-16	True	AATAAA	-19	NA	132657957	132646130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132647194_132647298_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ES.20156.1	chr2	+	1762	5	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	304.988012059491	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1568	False	NA	13	True	AATAAA	-28	NA	132688531	132708705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132689046_132691785_132691924_132704254_132704324_132706009_132706102_132707756
ES.20156.11	chr2	+	2944	6	NIC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	10	264	intron_retention	FALSE	canonical	3	562	junction_2	83.3508248309517	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAGGTTTTTGATTAA	1654	False	NA	13	True	AATAAA	-20	NA	132688617	132708071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132706102_132707756
ES.20156.12	chr2	+	1506	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	38	380	16	-36	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTACAGAGCTTTAA	1660	False	NA	NA	False	AATAAA	-19	NA	132688623	132708325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.13	chr2	+	3337	4	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	16	-19	intron_retention	FALSE	canonical	3	36	junction_2	331.871795862331	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCCATGCCTTGCA	1660	False	NA	-6	True	AATAAA	-9	NA	132688623	132708686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132689046_132691785_132691924_132704254_132706102_132707756
ES.20156.14	chr2	+	2038	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	220	-334	198	334	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGACAGGGTTCTGAT	1842	False	NA	NA	False	NA	NA	NA	132688805	132709039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.15	chr2	+	1542	6	FSM	ENSMUSG00000027357.17	ENSMUST00000124834.8	1772	6	211	19	211	-19	multi-exon	FALSE	canonical	3	24	junction_2	279.759611094954	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCCATGCCTTGCA	1855	False	NA	-6	True	AATAAA	-9	NA	132688818	132708686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132689046_132691785_132691924_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.16	chr2	+	7350	1	NIC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	7208	-1840	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAATGATAAATCGCAAC	938	False	NA	NA	False	AAAAAG	-4	NA	132696865	132704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132696900_132704200
ES.20156.17	chr2	+	4891	4	ISM	ENSMUSG00000027357.17	ENSMUST00000154160.2	720	7	9142	-264	9142	264	3prime_fragment	FALSE	canonical	3	642	junction_1	69.0136862433017	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAGGTTTTTGATTAA	2872	False	NA	13	True	AATAAA	-20	NA	132698799	132708071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.2	chr2	+	1963	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	-33	-6	-33	6	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGTGGTGTGTGTT	1589	False	NA	19	True	AATAAA	-34	NA	132688552	132708711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.3	chr2	+	1318	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	-22	628	-22	270	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTTGATTAATTTGTG	1600	False	NA	19	True	AATAAA	-26	NA	132688563	132708077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.4	chr2	+	1086	5	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	-12	264	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	304.988012059491	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAGGTTTTTGATTAA	1610	False	NA	13	True	AATAAA	-20	NA	132688573	132708071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132689046_132691785_132691924_132704254_132704324_132706009_132706102_132707756
ES.20156.5	chr2	+	1643	4	NIC	ENSMUSG00000027357.17	novel	1772	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_2	299.273564931263	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1618	False	NA	13	True	AATAAA	-28	NA	132688581	132708705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132689046_132691785_132691924_132706009_132706102_132707756
ES.20156.6	chr2	+	2011	8	NNC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	303.597410652828	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1620	False	NA	13	True	AATAAA	-28	NA	132688583	132708705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132704655_132704741_132706009_132706102_132707756
ES.20156.7	chr2	+	2937	6	ISM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	8	634	-2	264	intron_retention	FALSE	canonical	3	562	junction_2	54.0074068994245	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAGGTTTTTGATTAA	1630	False	NA	13	True	AATAAA	-20	NA	132688593	132708071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009
ES.20156.8	chr2	+	4017	6	NIC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	3	264	intron_retention	FALSE	canonical	3	562	junction_1	87.6173498800323	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAGGTTTTTGATTAA	1635	False	NA	13	True	AATAAA	-20	NA	132688598	132708071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ES.20156.9	chr2	+	1667	8	NNC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	245.143606392461	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1642	False	NA	13	True	AATAAA	-28	NA	132688605	132708705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756_132708221_132708457
ES.20157.1	chr2	-	7935	4	ISM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	900	-4242	900	4242	3prime_fragment	FALSE	canonical	3	9	junction_1	2.86744175568088	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCAAATGGACCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	132721911	132705982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154
ES.20157.10	chr2	-	2027	1	NIC	ENSMUSG00000043110.3	novel	3715	5	NA	NA	917	-9643	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACATACCAATCCTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	132721894	132719867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_132719900_132721900
ES.20157.2	chr2	-	6417	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-30	-2672	-30	2672	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTAGTACTAGTGACT	NA	False	NA	NA	False	AATAAA	-28	NA	132722841	132707552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
ES.20157.3	chr2	-	5288	5	NNC	ENSMUSG00000043110.3	novel	3715	5	NA	NA	1451	2014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.44862367942584	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTGTGTATCCAATC	NA	False	NA	NA	False	CATAAA	-18	NA	132721360	132708210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132712824_132713946_132714079_132715430_132715563_132719932_132720138_132721154
ES.20157.4	chr2	-	3858	6	NNC	ENSMUSG00000043110.3	novel	3715	5	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.67097875150313	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGATGTATTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	132722823	132710225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132712824_132713946_132714079_132715430_132715563_132719932_132720138_132721154_132721836_132722713
ES.20157.5	chr2	-	3766	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-52	1	-52	-1	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGATGTATTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	132722863	132710225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
ES.20157.7	chr2	-	3624	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	-22	113	-22	-113	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTCAAGAATGAGTCTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	132722833	132710337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
ES.20157.9	chr2	-	2419	4	ISM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	902	1272	902	-1272	3prime_fragment	FALSE	canonical	3	9	junction_1	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTCAATTATCCCCGT	NA	False	NA	NA	False	ATTAAA	-32	NA	132721909	132711496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154
ES.20158.1	chr2	-	175	1	Intergenic	novelGene_16677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCATTCTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	132740061	132739886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_132739900_132740100
ES.20159.1	chr2	-	4618	15	FSM	ENSMUSG00000027356.9	ENSMUST00000038280.5	4915	15	508	-211	231	211	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGCCTGCTGTCTTGTT	6216	False	NA	NA	False	AATATA	-16	NA	132787318	132746097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132748762_132753097_132753240_132757110_132757236_132757820_132758043_132759383_132759491_132760425_132760551_132764716_132764767_132766876_132767009_132767606_132767715_132774975_132775079_132776740_132776955_132777935_132778083_132781201_132781436_132783856_132784026_132787242
ES.20159.2	chr2	-	4102	15	NNC	ENSMUSG00000027356.9	novel	4915	15	NA	NA	228	210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.494871659305393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGCCTGCTGTCTTGT	6213	False	NA	NA	False	AATATA	-15	NA	132787321	132746098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_132746662_132746945_132748762_132753097_132753240_132757110_132757236_132757820_132758043_132759383_132759491_132760425_132760551_132764716_132764767_132766876_132767009_132767606_132767715_132774975_132775079_132776740_132776955_132777935_132778083_132783856_132784026_132787242
ES.20159.3	chr2	-	3271	15	FSM	ENSMUSG00000027356.9	ENSMUST00000038280.5	4915	15	505	1139	228	-1139	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCATTCTGGATGTGGA	6213	False	NA	NA	False	TATAAA	-19	NA	132787321	132747447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_132748762_132753097_132753240_132757110_132757236_132757820_132758043_132759383_132759491_132760425_132760551_132764716_132764767_132766876_132767009_132767606_132767715_132774975_132775079_132776740_132776955_132777935_132778083_132781201_132781436_132783856_132784026_132787242
ES.2016.1	chr1	+	5199	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACAAAATCAGGGAATG	NA	False	NA	NA	False	AGTAAA	-30	NA	179324502	179329701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179324500_179329700
ES.20160.1	chr2	+	3479	3	FSM	ENSMUSG00000027358.7	ENSMUST00000028836.7	3555	3	71	5	71	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAACCCGTGAGAGCAAAT	NA	False	NA	NA	False	AATAAA	-32	NA	133394149	133404800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_133395272_133396338_133396689_133402793
ES.20161.1	chr2	-	114	1	Intergenic	novelGene_16678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAATAACTGTGAA	NA	False	NA	NA	False	CATAAA	-13	NA	133444009	133443895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_133443900_133444000
ES.20162.1	chr2	+	210	1	Intergenic	novelGene_16679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCAAGCCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	134371663	134371873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_134371700_134371900
ES.20163.1	chr2	+	5721	3	Antisense	novelGene_ENSMUSG00000034723.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGACTAGGGAGATACAG	NA	False	NA	NA	False	NA	NA	NA	134472109	134482533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_134473402_134476101_134476407_134478409
ES.20164.1	chr2	-	5208	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	-17	297	-17	-297	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGAGTGTTCATTCTC	2675	False	NA	NA	False	AAAAAG	-19	NA	134486082	134436401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ES.20164.2	chr2	-	2075	2	NNC	ENSMUSG00000034723.12	novel	5488	8	NA	NA	47075	-298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGAGTGTTCATTCT	NA	False	NA	NA	False	AAAAAG	-18	NA	134438886	134436402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_134437899_134438307
ES.20164.3	chr2	-	4972	9	NNC	ENSMUSG00000034723.12	novel	5488	8	NA	NA	0	-316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.0521789368672	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTCTGTGTTTAT	2705	False	NA	NA	False	CATAAA	-44	NA	134486052	134436420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_134438554_134438740_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ES.20164.4	chr2	-	5027	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	56	405	1	-405	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAGTGGTGTATTGCT	2748	False	NA	NA	False	NA	NA	NA	134486009	134436509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ES.20164.5	chr2	-	4919	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	15	554	2	-554	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAATCAGTTCATCATT	2707	False	NA	NA	False	AATAGA	-17	NA	134486050	134436658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ES.20164.6	chr2	-	4516	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	-26	998	-26	-998	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAACGCTCTCAGTGTTG	2666	False	NA	NA	False	NA	NA	NA	134486091	134437102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ES.20164.7	chr2	-	2485	1	NIC	ENSMUSG00000034723.12	novel	5488	8	NA	NA	1	-2114	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	2748	False	NA	NA	False	NA	NA	NA	134486009	134483524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_134483500_134486000
ES.20165.1	chr2	-	1597	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	-18	-772	-18	772	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGGTGGTGGCTGGG	NA	False	NA	NA	False	AATAAA	-35	NA	134605568	134603971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_134604000_134605600
ES.20166.1	chr2	+	3573	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	-2556	-537	-2556	537	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	134643312	134646885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_134643300_134646900
ES.20166.2	chr2	+	322	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	276	-118	276	118	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	134646144	134646466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_134646100_134646500
ES.20167.1	chr2	+	3685	7	ISM	ENSMUSG00000051177.17	ENSMUST00000131552.5	7202	33	584484	-9	121378	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	0.372677996249965	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCTGGACCTTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	135212470	135317176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ES.20167.2	chr2	+	180	1	Intergenic	novelGene_16680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135275060	135275240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_135275100_135275200
ES.20168.1	chr2	+	1994	1	Intergenic	novelGene_16681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACTGGCTACACAAAC	NA	False	NA	NA	False	NA	NA	NA	135354099	135356093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_135354100_135356100
ES.20169.1	chr2	+	1531	4	Antisense	novelGene_ENSMUSG00000085631.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATATGTCTAAAGAAG	NA	False	NA	NA	False	ATTAAA	-32	NA	135395193	135408206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_135395945_135403120_135403262_135407117_135407201_135407650
ES.2017.1	chr1	+	157	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	179333310	179333467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179333300_179333500
ES.20170.1	chr2	+	2781	2	ISM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	-2425	2640	-2425	-2640	5prime_fragment	FALSE	canonical	3	692	junction_1	0	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCCTTGCTGTAAAATAT	NA	False	NA	NA	False	AATAAA	-29	NA	135488401	135491343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_135490892_135491052
ES.20170.10	chr2	+	708	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	1	intron_retention	FALSE	canonical	3	453	junction_1	106.871677986057	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488442	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417
ES.20170.100	chr2	+	5471	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-47	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.6859985375397	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501583	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135779068_135779238_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.101	chr2	+	5298	38	NNC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	56	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4606272700006	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTATTTGCTTCCAC	NA	False	NA	12	True	AATAAA	-24	NA	135606886	135856523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135606976_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.103	chr2	+	2779	12	NNC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	-6901	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.2496602680165	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135818047	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849853_135854885
ES.20170.104	chr2	+	2647	12	NIC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	-998	9	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	15.2808420000799	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135823950	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.105	chr2	+	5194	1	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	2151	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135851300	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135851300_135856500
ES.20170.11	chr2	+	4221	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	3514	intron_retention	FALSE	canonical	3	453	junction_1	106.871677986057	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCCTAATGCTGATT	NA	False	NA	NA	False	AATAGA	-13	NA	135488442	135497497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417
ES.20170.12	chr2	+	5348	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	-1	multi-exon	FALSE	canonical	2	48	junction_3	56.0997994648822	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAACATCTACCAGAGTA	NA	False	NA	1	True	AATAAA	-13	NA	135488442	135856512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493442_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.13	chr2	+	383	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	1	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488442	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
ES.20170.14	chr2	+	3305	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	2668	intron_retention	FALSE	canonical	3	137	junction_2	158	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTATAATCTCTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	135488442	135496651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135493417
ES.20170.15	chr2	+	5403	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	0	multi-exon	FALSE	canonical	0	0	junction_3	96.5147624718623	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135488442	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490827_135490892_135491052_135491123_135583749_135583808_135647479_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.16	chr2	+	5611	43	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	0	multi-exon	FALSE	canonical	0	0	junction_13	65.1201793233253	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135488442	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493442_135583749_135583808_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135780879_135780969_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.17	chr2	+	1320	1	Intergenic	novelGene_16682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTTTAGAAATTCTT	NA	False	NA	NA	False	GATAAA	-11	NA	135488443	135489763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_135488400_135489800
ES.20170.18	chr2	+	4151	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	3515	intron_retention	FALSE	canonical	3	137	junction_2	158	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTAATGCTGATTT	NA	False	NA	NA	False	AATAGA	-14	NA	135488443	135497498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135493417
ES.20170.19	chr2	+	740	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-2261	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCACTGTAAGACTTAGA	NA	False	NA	NA	False	NA	NA	NA	135488443	135491722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052
ES.20170.2	chr2	+	419	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.149137416728	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488442	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135493766
ES.20170.20	chr2	+	545	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.981024981591	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTAAACTCTGAGCCC	NA	False	NA	19	True	AATAAA	-29	NA	135488443	135493977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493478_135493766
ES.20170.21	chr2	+	331	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTGGCCAACACTTAAA	NA	False	NA	9	True	AATAAA	-19	NA	135488443	135493967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493766
ES.20170.22	chr2	+	726	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	1	intron_retention	FALSE	canonical	3	31	junction_1	275.573341719889	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488443	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135493417
ES.20170.23	chr2	+	3043	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2662	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTCTTTTGTTATAAT	NA	False	NA	NA	False	ATTAAA	-12	NA	135488443	135496645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
ES.20170.24	chr2	+	3246	1	Genic_Genomic	ENSMUSG00000084762.2	novel	NA	NA	NA	NA	-2383	-2294	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATGCAATAAATGAGC	NA	False	NA	NA	False	NA	NA	NA	135488443	135491689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_135488400_135491700
ES.20170.25	chr2	+	1122	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	296.085608397301	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488443	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491827_135493417_135493478_135493766
ES.20170.26	chr2	+	3715	35	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	3754	37	NA	NA	-2383	6572	multi-exon	FALSE	canonical	0	0	junction_3	68.4693753682754	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGGTTGTAACGCCTT	NA	False	NA	NA	False	AAAAAG	-22	NA	135488443	135836688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493478_135583749_135583808_135623368_135623505_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213
ES.20170.27	chr2	+	841	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	1	intron_retention	FALSE	canonical	3	26	junction_3	270.278560008004	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488443	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417
ES.20170.28	chr2	+	2879	1	Genic_Genomic	ENSMUSG00000084762.2	novel	NA	NA	NA	NA	-2383	-2661	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAATAAACAGACAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	135488443	135491322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_135488400_135491300
ES.20170.29	chr2	+	4633	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	0	intron_retention	FALSE	canonical	3	97	junction_2	297.5	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488443	135493983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135490892_135491052_135492672_135493417
ES.20170.3	chr2	+	362	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	-2659	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	330.5	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAGACAAAAAAAT	NA	False	NA	NA	False	AATAAA	-10	NA	135488442	135491324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490827_135490892_135491052
ES.20170.30	chr2	+	5403	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2383	0	multi-exon	FALSE	canonical	0	0	junction_3	27.2341697137989	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135488443	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490827_135490892_135493417_135493478_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.31	chr2	+	3727	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	2661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.32049379893857	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTCTTTTGTTATAA	NA	False	NA	NA	False	ATTAAA	-11	NA	135488443	135496644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135491052_135491827_135493417_135493478_135493776
ES.20170.33	chr2	+	5465	42	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2383	11	multi-exon	FALSE	canonical	0	0	junction_4	117.678445510532	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTATTTGCTTCCACG	NA	False	NA	13	True	AATAAA	-25	NA	135488443	135856524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.34	chr2	+	4794	2	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2382	1	intron_retention	FALSE	canonical	3	97	junction_1	0	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488444	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135492672_135493417
ES.20170.35	chr2	+	309	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2382	-1	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_2	130.516920997496	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTCTGAGCCCAAAAT	NA	False	NA	24	True	AATAAA	-34	NA	135488444	135493982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135493417_135493442_135493766
ES.20170.36	chr2	+	5467	43	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2382	-19	multi-exon	FALSE	canonical	0	0	junction_4	121.79695986808	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135488444	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493478_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836216_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.37	chr2	+	5354	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2382	-19	multi-exon	FALSE	canonical	0	0	junction_4	34.6793886912673	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135488444	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135493417_135493442_135583749_135583808_135647468_135647526_135653474_135653546_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.38	chr2	+	5427	42	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2381	9	multi-exon	FALSE	canonical	0	0	junction_3	62.752727578651	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135488445	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493478_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.4	chr2	+	5474	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	15	multi-exon	FALSE	canonical	0	0	junction_3	60.9590846387969	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTGCTTCCACGATGC	NA	False	NA	17	True	AATAAA	-29	NA	135488442	135856528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493478_135583749_135583882_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.40	chr2	+	420	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2376	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	295.136726789466	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488450	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490827_135490892_135491052_135491123_135493417_135493478_135493776
ES.20170.41	chr2	+	3418	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	0	2662	intron_retention	FALSE	canonical	0	0	junction_2	323.880636449089	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTCTTTTGTTATAAT	NA	False	NA	NA	False	ATTAAA	-12	NA	135490826	135496645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135490892_135491052_135491123_135491771_135491827_135493417
ES.20170.42	chr2	+	1936	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	185	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.5	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135491011	135493983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135492672_135493417_135493477_135493766
ES.20170.43	chr2	+	5832	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-2065	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3104345892232	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATTTGCTTCCACGAT	NA	False	NA	15	True	AATAAA	-27	NA	135498865	135856526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135499431_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.44	chr2	+	5189	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-6	-515	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	17.4713061159182	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTACGGCACAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	135500924	135855998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.46	chr2	+	5336	36	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	93	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.8460118109277	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCTTCCACGATGCT	NA	False	NA	18	True	AATAAA	-30	NA	135501023	135856529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.47	chr2	+	5615	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	94	11	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	17.4713061159182	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTATTTGCTTCCACG	NA	False	NA	13	True	AATAAA	-25	NA	135501024	135856524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.48	chr2	+	5641	40	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	102	9	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	29.7006321088628	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135501032	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.49	chr2	+	5664	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	110	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	35.1082481210263	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTACCAGAGTATTTGCT	NA	False	NA	7	True	AATAAA	-19	NA	135501040	135856518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809099_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135844854_135844914_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.5	chr2	+	339	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTGAGCCCAAAATCA	NA	False	NA	26	True	AATAAA	-36	NA	135488442	135493984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493776
ES.20170.51	chr2	+	6686	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	116	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.6238874933785	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTACCAGAGTATTTG	NA	False	NA	5	True	AATAAA	-17	NA	135501046	135856516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135783006_135784108_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.52	chr2	+	5538	38	NIC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	116	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.6683315772232	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTTGCTTCCACGATG	NA	False	NA	16	True	AATAAA	-28	NA	135501046	135856527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.54	chr2	+	5684	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	157	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	29.0260260914931	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGAGTATTTGCTTC	NA	False	NA	9	True	AATAAA	-21	NA	135501087	135856520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135623368_135623505_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.55	chr2	+	3577	31	NNC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	158	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	26.8922954683224	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAACTTTCTGTACT	NA	False	NA	NA	False	AATATA	-12	NA	135501088	135830117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829734
ES.20170.56	chr2	+	5416	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-244	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	25.1763310557627	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTATTTGCTTCCAC	NA	False	NA	12	True	AATAAA	-24	NA	135501229	135856523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825054_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.57	chr2	+	2268	14	NIC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	-237	1005	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	20.2013532852681	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTGTCTTCT	NA	False	NA	NA	False	AATAAA	-41	NA	135501236	135793278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131
ES.20170.58	chr2	+	5421	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-234	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	24.7120256257215	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTATTTGCTTCCAC	NA	False	NA	12	True	AATAAA	-24	NA	135501239	135856523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829734_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.59	chr2	+	4790	32	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-233	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.8288598550857	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501240	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.6	chr2	+	355	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2384	-2647	at_least_one_novel_splicesite	FALSE	canonical	3	453	junction_1	119.5	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTACCCTTGCTGT	NA	False	NA	NA	False	AATAAA	-22	NA	135488442	135491336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135488469_135490846_135490892_135491052
ES.20170.60	chr2	+	5470	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-233	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	34.8664400111806	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTACCAGAGTATTTG	NA	False	NA	5	True	AATAAA	-17	NA	135501240	135856516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829401_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135850133_135850215_135852855_135852893_135854885
ES.20170.61	chr2	+	4090	29	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	34.3116531344138	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501240	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809099_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135823999_135855233
ES.20170.63	chr2	+	5495	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.9092205300526	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAACATCTACCAGAG	NA	False	NA	-1	True	AATAAA	-11	NA	135501243	135856510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135505910_135506024_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.64	chr2	+	5374	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-226	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	25.1763310557627	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501247	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825052_135829392_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.65	chr2	+	5553	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	29.2946894456536	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501248	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501375_135583749_135583808_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.66	chr2	+	5302	38	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-204	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.321591438069	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501269	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.68	chr2	+	5260	38	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-153	10	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	24.9137298929812	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTATTTGCTTCCAC	NA	False	NA	12	True	AATAAA	-24	NA	135501320	135856523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.69	chr2	+	5496	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-56	9	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135501417	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.7	chr2	+	5366	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	-19	multi-exon	TRUE	canonical	0	0	junction_3	58.1717070404505	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135488442	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493478_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.71	chr2	+	5402	38	NNC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6179224362133	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAACATCTACCAGAG	NA	False	NA	-1	True	AATAAA	-11	NA	135501438	135856510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800655_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.72	chr2	+	3794	33	NNC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	-32	6622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.7393679068106	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGTAGTTCTCCTCA	NA	False	NA	NA	False	TATAAA	-20	NA	135501441	135836738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135585807_135585894_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213
ES.20170.73	chr2	+	5377	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-31	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	25.7893259931324	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501442	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792197_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.74	chr2	+	5475	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-25	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	34.6250888581566	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501448	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792345_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.75	chr2	+	5446	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-19	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	30.132636157045	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501454	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809099_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.76	chr2	+	5546	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-19	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.1192811509913	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATGAAAACACAT	NA	False	NA	-17	True	NA	NA	NA	135501454	135856494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.77	chr2	+	5621	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	29.6420681211409	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAACATCTACCAGAGT	NA	False	NA	0	True	AATAAA	-12	NA	135501454	135856511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.78	chr2	+	5435	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-19	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	34.5890688193293	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTGCTTCCACGATGC	NA	False	NA	17	True	AATAAA	-29	NA	135501454	135856528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792197_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.79	chr2	+	4066	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-19	-60	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTATTGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	135501454	135855129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.8	chr2	+	5431	42	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	9	multi-exon	FALSE	canonical	2	12	junction_22	117.964805850699	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135488442	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.80	chr2	+	3716	32	NNC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	-18	6622	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	27.468078152243	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGTAGTTCTCCTCA	NA	False	NA	NA	False	TATAAA	-20	NA	135501455	135836738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829734_135829823_135836213
ES.20170.81	chr2	+	5442	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	25.7841562724368	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501457	135856513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844585_135849268_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.82	chr2	+	5805	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-14	360	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCTCCTTCCAAGAG	NA	False	NA	NA	False	AATAAA	-24	NA	135501459	135856873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.83	chr2	+	3679	32	NIC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	-7	6618	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	19.3048278617581	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAATGTAGTAGTTCTC	NA	False	NA	NA	False	TATAAA	-16	NA	135501466	135836734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213
ES.20170.85	chr2	+	5443	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.4895990621315	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGAGTATTTGCTTC	NA	False	NA	9	True	AATAAA	-21	NA	135501469	135856520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647479_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809099_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.86	chr2	+	7839	41	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-3	15	intron_retention	FALSE	canonical	0	0	junction_3	40.8022977294172	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTGCTTCCACGATGC	NA	False	NA	17	True	AATAAA	-29	NA	135501470	135856528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135623368_135623505_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135804452_135804541_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855
ES.20170.88	chr2	+	5568	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	29.3771861553091	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAACATCTACCAGAGTA	NA	False	NA	1	True	AATAAA	-13	NA	135501471	135856512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135623368_135623505_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.9	chr2	+	5413	41	Fusion	ENSMUSG00000039943.17_ENSMUSG00000084762.2	novel	5217	37	NA	NA	-2384	-3	multi-exon	FALSE	canonical	0	0	junction_3	67.5933382442382	355	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAACATCTACCAGAG	NA	False	NA	-1	True	AATAAA	-11	NA	135488442	135856510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_135488469_135490846_135490892_135493417_135493478_135583749_135583808_135585807_135585894_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.91	chr2	+	5510	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	30.8752234232121	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAACATCTACCAGAG	NA	False	NA	-1	True	AATAAA	-11	NA	135501472	135856510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135850133_135850215_135852855_135852893_135854885
ES.20170.92	chr2	+	5557	39	NNC	ENSMUSG00000039943.17	novel	3635	36	NA	NA	1	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.9600614527572	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135501474	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135628624_135628798_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.93	chr2	+	3152	29	NNC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	2	229	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_19	26.2976486882499	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135501475	135825162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895
ES.20170.94	chr2	+	5378	38	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	4	9	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	25.3834868070477	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGAGTATTTGCTTCCA	NA	False	NA	11	True	AATAAA	-23	NA	135501477	135856522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.95	chr2	+	5139	36	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.3075064945195	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAACATCTACCAGAG	NA	False	NA	-1	True	AATAAA	-11	NA	135501477	135856510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.97	chr2	+	5512	40	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	33.9196172431979	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGAGTATTTGCTTC	NA	False	NA	9	True	AATAAA	-21	NA	135501478	135856520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_135501651_135583749_135583808_135623368_135623505_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792188_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ES.20170.99	chr2	+	3651	33	NIC	ENSMUSG00000039943.17	novel	3754	37	NA	NA	-1	6621	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	32.8875777982736	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTAGTAGTTCTCCTC	NA	False	NA	NA	False	TATAAA	-19	NA	135501533	135836737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213
ES.20171.1	chr2	-	180	1	Intergenic	novelGene_16683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAACGACAGGAGTTGGA	NA	False	NA	NA	False	NA	NA	NA	135489607	135489427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_135489400_135489600
ES.20172.1	chr2	-	1474	1	Intergenic	novelGene_16684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135560622	135559148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_135559100_135560600
ES.20173.1	chr2	-	2447	1	Intergenic	novelGene_16685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135735959	135733512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_135733500_135736000
ES.20174.1	chr2	-	2219	1	Intergenic	novelGene_16686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	135743101	135740882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_135740900_135743100
ES.20175.1	chr2	-	4376	5	NNC	ENSMUSG00000039913.13	novel	3957	10	NA	NA	172	-31272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTCTCTCCTTTTAAA	NA	False	NA	NA	False	AATAAA	-18	NA	136229686	135955088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_135958883_136015980_136016196_136111242_136111398_136114142_136114242_136229573
ES.20176.1	chr2	-	2395	5	Intergenic	novelGene_16687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGATGGTAGACTTTTC	NA	False	NA	NA	False	NA	NA	NA	136494464	136456718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_136458257_136465090_136465171_136465974_136466022_136469291_136469400_136493842
ES.20177.1	chr2	+	2028	8	FSM	ENSMUSG00000027273.14	ENSMUST00000110098.4	1014	8	-24	-990	0	-87	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTCCTCTGTTGGT	2457	False	NA	12	True	ATTAAA	-4	NA	136555373	136624261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136555521_136597987_136598122_136600230_136600273_136605492_136605542_136611662_136611781_136615814_136615941_136619255_136619401_136622994
ES.20178.1	chr2	+	4952	7	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	8.66826908263056	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTGCAATTTGCTT	9359	False	NA	19	True	AATAAA	-27	NA	136733135	136913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733310_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.10	chr2	+	3408	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	-559	2240	1	61	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCTTTTCAAATCT	9752	False	NA	NA	False	NA	NA	NA	136733528	136911630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.11	chr2	+	4822	7	NIC	ENSMUSG00000027281.17	novel	4906	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	8.41955396021006	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	9757	False	NA	15	True	AATAAA	-23	NA	136733533	136913870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.12	chr2	+	5155	9	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	9.4728229688937	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTGCAATTTGCTT	9757	False	NA	19	True	AATAAA	-27	NA	136733533	136913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136747462_136747521_136788961_136789170_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.13	chr2	+	2790	9	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	14	-51	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	7.20134536041704	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTCCATTATATTATAG	9765	False	NA	NA	False	NA	NA	NA	136733541	136911647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136734203_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.14	chr2	+	5006	9	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	18	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	7.20134536041704	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTTTGTTGTGCAA	9769	False	NA	12	True	AATAAA	-20	NA	136733545	136913867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136734203_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.15	chr2	+	5280	10	NNC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.4927958825138	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTTGTTGTGCAAT	9772	False	NA	13	True	AATAAA	-21	NA	136733548	136913868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_136733582_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136889004_136889195_136903876_136904041_136908049_136908151_136909512
ES.20178.16	chr2	+	4333	7	ISM	ENSMUSG00000027281.17	ENSMUST00000135260.8	4906	8	606	589	46	-589	3prime_fragment	FALSE	canonical	2	8	junction_3	6.76798016808232	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTTAATGCAAGTAATC	NA	False	NA	NA	False	AATAAA	-16	NA	136734133	136913281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.17	chr2	+	4921	7	ISM	ENSMUSG00000027281.17	ENSMUST00000135260.8	4906	8	607	0	47	0	3prime_fragment	FALSE	canonical	2	8	junction_3	6.76798016808232	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	NA	False	NA	15	True	AATAAA	-23	NA	136734134	136913870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.18	chr2	+	4439	5	ISM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	54	23921	54	-20242	intron_retention	FALSE	canonical	3	13	junction_4	5.62916512459885	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTTTGTTGGGCTA	NA	False	NA	NA	False	AATAAA	-5	NA	136734141	136889949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919
ES.20178.19	chr2	+	3221	6	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	58	572	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	10.8185026690388	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTATTTTCTTTCTTT	NA	False	NA	NA	False	AATAGA	-18	NA	136734145	136912270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136908049_136908151_136909512
ES.20178.2	chr2	+	4856	6	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.1462998344742	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTTGTTGTGCAAT	9359	False	NA	13	True	AATAAA	-21	NA	136733135	136913868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733310_136747462_136747521_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.20	chr2	+	4807	6	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	73	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	10.8185026690388	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTGTGCAATTTG	NA	False	NA	16	True	AATAAA	-24	NA	136734160	136913871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136908049_136908151_136909512
ES.20178.21	chr2	+	4579	9	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	85	-633	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	9.69535971483266	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGCGTTCCACAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	136734172	136913237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136734282_136747462_136747521_136788961_136789170_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.22	chr2	+	2985	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	89	2015	89	157	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACCTCTCCATGTCCTG	NA	False	NA	NA	False	NA	NA	NA	136734176	136911855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.23	chr2	+	5192	9	NIC	ENSMUSG00000027281.17	novel	5089	8	NA	NA	102	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	9.69535971483266	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTTTGTTGTGCAA	NA	False	NA	12	True	AATAAA	-20	NA	136734189	136913867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136734282_136747462_136747521_136788961_136789170_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.24	chr2	+	3024	1	Intergenic	novelGene_16688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATTTGGTGTTGATGT	NA	False	NA	NA	False	NA	NA	NA	136748092	136751116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_136748100_136751100
ES.20178.25	chr2	+	3801	1	Intergenic	novelGene_16691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTT	NA	False	NA	NA	False	AAAACA	-25	NA	136853089	136856890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_136853100_136856900
ES.20178.26	chr2	+	4106	1	Genic_Genomic	ENSMUSG00000027281.17	novel	NA	NA	NA	NA	164671	2369	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	736	False	NA	NA	False	NA	NA	NA	136912133	136916239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_136912100_136916200
ES.20178.3	chr2	+	5068	8	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	7.17990392750232	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	9360	False	NA	15	True	AATAAA	-23	NA	136733136	136913870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733310_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.4	chr2	+	4802	6	FSM	ENSMUSG00000027281.17	ENSMUST00000028737.13	2556	6	6	-2252	6	-49	multi-exon	FALSE	canonical	1	1	junction_4	10.0598210719674	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTACCTGTTTTAT	9367	False	NA	-34	True	AATAAA	-14	NA	136733143	136913821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136733310_136747462_136747521_136842103_136842194_136885919_136885998_136908049_136908151_136909512
ES.20178.5	chr2	+	5215	9	NNC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.84590300647707	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTTGTTGTGCAAT	9370	False	NA	13	True	AATAAA	-21	NA	136733146	136913868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_136733310_136733422_136733582_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.6	chr2	+	5710	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	-617	-4	50	4	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTGCAATTTGCTT	9694	False	NA	19	True	AATAAA	-27	NA	136733470	136913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.7	chr2	+	4957	8	FSM	ENSMUSG00000027281.17	ENSMUST00000135260.8	4906	8	-52	1	-52	-1	multi-exon	FALSE	canonical	2	6	junction_1	8.59995253902424	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTTTGTTGTGCAATT	9699	False	NA	14	True	AATAAA	-22	NA	136733475	136913869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_136733582_136734203_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.8	chr2	+	5068	8	NIC	ENSMUSG00000027281.17	novel	4906	8	NA	NA	-35	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	10.1337987719818	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTTTGTTGTGCAA	9716	False	NA	12	True	AATAAA	-20	NA	136733492	136913867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136747462_136747521_136788961_136789170_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20178.9	chr2	+	5112	9	NIC	ENSMUSG00000027281.17	novel	1572	9	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	10.6770782520313	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAGTAAGTTTGTTGT	9746	False	NA	8	True	AATAAA	-16	NA	136733522	136913863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_136733582_136734203_136734282_136747462_136747521_136788961_136789170_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ES.20179.1	chr2	-	2950	7	NNC	ENSMUSG00000027274.17	novel	3178	6	NA	NA	3	30754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.946263570872	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGAATTCTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	136733071	136684945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136684966_136715709_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ES.20179.10	chr2	-	1143	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	223	-422	223	422	multi-exon	FALSE	canonical	3	323	junction_1	8.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCAAGTCTGAAGCCTG	NA	False	NA	-6	True	AATAAA	-25	NA	136733086	136722768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136723560_136727392_136727621_136732962
ES.20179.11	chr2	-	992	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	221	-269	221	269	multi-exon	FALSE	canonical	3	323	junction_1	8.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCGTGCAGAATCACGT	NA	False	NA	NA	False	ATTAAA	-11	NA	136733088	136722921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136723560_136727392_136727621_136732962
ES.20179.12	chr2	-	722	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	223	-1	223	1	multi-exon	FALSE	canonical	3	323	junction_1	8.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTGCCTTCACAAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	136733086	136723189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136723560_136727392_136727621_136732962
ES.20179.13	chr2	-	605	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	215	124	215	-124	multi-exon	FALSE	canonical	3	323	junction_1	8.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGTCTGAAACCACTT	NA	False	NA	-3	True	AATAAA	-40	NA	136733094	136723314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136723560_136727392_136727621_136732962
ES.20179.14	chr2	-	569	3	ISM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	-1	7624	-1	-185	5prime_fragment	FALSE	canonical	3	17	junction_2	153	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGCTGGTTATTGTCTG	NA	False	NA	-12	True	AATAAA	-31	NA	136733303	136723323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_136723560_136727392_136727621_136733198
ES.20179.3	chr2	-	2952	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	-17	0	-10	0	multi-exon	FALSE	canonical	3	17	junction_5	104.732802884292	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733319	136715699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
ES.20179.4	chr2	-	3104	7	NNC	ENSMUSG00000027274.17	novel	3178	6	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.946263570872	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733363	136715699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962_136733071_136733198
ES.20179.5	chr2	-	1563	5	NIC	ENSMUSG00000027274.17	novel	3178	6	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	126.235890300659	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTATACAATCCTTA	NA	False	NA	-3	True	AATAAA	-17	NA	136733086	136715702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_136716627_136718008_136718120_136719534_136719711_136727392_136727621_136732962
ES.20179.6	chr2	-	2978	3	ISM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	11825	3	11597	-3	3prime_fragment	FALSE	canonical	3	87	junction_2	4.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTATACAATCCTTA	NA	False	NA	-3	True	AATAAA	-17	NA	136721477	136715702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_136716627_136718008_136718120_136719534
ES.20179.7	chr2	-	2869	6	NNC	ENSMUSG00000027274.17	novel	2935	6	NA	NA	-70	-4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	106.989719132261	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTGTATACAATCCTT	NA	False	NA	-4	True	AATAAA	-16	NA	136733379	136715703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733337
ES.20179.8	chr2	-	3064	7	NNC	ENSMUSG00000027274.17	novel	3178	6	NA	NA	-23	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	114.067231637019	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTGTATACAATCCTT	NA	False	NA	-4	True	AATAAA	-16	NA	136733097	136715703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136726948_136727051_136727392_136727621_136732962
ES.20179.9	chr2	-	2620	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	270	288	35	-288	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCACCCCACTTTTGGT	NA	False	NA	NA	False	AATAAA	-26	NA	136733039	136715987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ES.2018.1	chr1	-	3271	6	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-11	54082	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	157.634260235521	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAGGAAAATGTTATTA	NA	False	NA	NA	False	AATAAA	-23	NA	179345581	179151017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179153693_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ES.2018.10	chr1	-	2014	1	Genic_Genomic	ENSMUSG00000055067.16	novel	NA	NA	NA	NA	-2	-7723	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAAAGGTTGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	179345608	179343594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_179343600_179345600
ES.2018.2	chr1	-	3860	6	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-14	31925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.58635769243	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGGAAAATAAATCCTTT	NA	False	NA	NA	False	AATACA	-14	NA	179345584	179173174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179176436_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ES.2018.3	chr1	-	3322	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGTCTTAGGAAATAG	NA	False	NA	NA	False	NA	NA	NA	179180063	179176741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179176700_179180100
ES.2018.4	chr1	-	2065	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	-12	-824	-12	824	multi-exon	FALSE	canonical	2	9	junction_1	165.062412438447	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTTTTTTTTTCCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	179345618	179221964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ES.2018.5	chr1	-	1461	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTGCAGTGTATG	NA	False	NA	NA	False	AATAAA	-21	NA	179229820	179228359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179228400_179229800
ES.2018.6	chr1	-	1449	2	FSM	ENSMUSG00000055067.16	ENSMUST00000194237.2	1047	2	-10	-392	-10	392	multi-exon	FALSE	canonical	3	7	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAACACAAACTG	NA	False	NA	NA	False	NA	NA	NA	179345580	179335479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179336701_179345352
ES.2018.7	chr1	-	1393	3	NNC	ENSMUSG00000055067.16	novel	1047	2	NA	NA	-14	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAACACAAACTG	NA	False	NA	NA	False	NA	NA	NA	179345584	179335479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179335900_179335959_179336701_179345352
ES.2018.8	chr1	-	984	3	NNC	ENSMUSG00000055067.16	novel	1047	2	NA	NA	24	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGGAGGGTTTTATGT	NA	False	NA	NA	False	AATAAA	-18	NA	179345546	179335850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179335900_179335959_179336701_179345352
ES.2018.9	chr1	-	3379	1	NIC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	-6	-6326	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAACCCAAACCAAACCAA	NA	False	NA	NA	False	NA	NA	NA	179345576	179342197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179342200_179345600
ES.20180.1	chr2	-	3545	1	Antisense	novelGene_ENSMUSG00000027281.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAACCAAGAAAACATC	NA	False	NA	NA	False	NA	NA	NA	136789480	136785935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_136785900_136789500
ES.20181.1	chr2	-	2668	1	Intergenic	novelGene_16689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGAGCCATTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	136809050	136806382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_136806400_136809000
ES.20182.1	chr2	-	176	1	Intergenic	novelGene_16690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	136827752	136827576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_136827600_136827800
ES.20183.1	chr2	+	3386	1	Antisense	novelGene_ENSMUSG00000027276.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTCTAGAGCAATTCTT	5212	False	NA	NA	False	NA	NA	NA	136920583	136923969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_136920600_136924000
ES.20184.1	chr2	-	6468	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	-853	-3	-853	3	multi-exon	TRUE	canonical	3	87	junction_14	16.9906327133512	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGAGTCTTGTGAGC	NA	False	NA	2	True	ATTAAA	-23	NA	136959417	136923372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.11	chr2	-	5042	26	NNC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	1906	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	35.6146037462162	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAACAGTGTGGAGTC	NA	False	NA	-6	True	AATAAA	-39	NA	136956658	136923380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136948991_136949115_136956572
ES.20184.12	chr2	-	3307	12	NIC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	-3901	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	40.3855386931658	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAACAGTGTGGAGTC	NA	False	NA	-6	True	AATAAA	-39	NA	136931770	136923380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930516_136930631_136931131_136931246_136931684
ES.20184.13	chr2	-	4572	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	191	849	191	588	multi-exon	FALSE	canonical	3	87	junction_14	16.9906327133512	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATATGACTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	136958373	136924224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.2	chr2	-	4567	22	NNC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	-12392	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	30.2333329583211	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGGAGTCTTGTGAGC	NA	False	NA	2	True	ATTAAA	-23	NA	136940261	136923372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136940167
ES.20184.3	chr2	-	5180	25	NIC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	268	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	28.7010452771323	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGTGGAGTCTTGTGA	NA	False	NA	0	True	AATAAA	-45	NA	136958296	136923374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.4	chr2	-	6317	25	NIC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	340	0	intron_retention	FALSE	canonical	3	87	junction_13	17.3389414004687	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	-1	True	AATAAA	-44	NA	136958224	136923375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.5	chr2	-	5179	25	NNC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.5712537004438	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	-1	True	AATAAA	-44	NA	136958325	136923375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930561_136931684_136931840_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.7	chr2	-	5424	26	NNC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.4305750909122	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	-1	True	AATAAA	-44	NA	136958372	136923375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928992_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20184.8	chr2	-	5788	13	NIC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	-6605	-2	intron_retention	FALSE	canonical	3	87	junction_10	18.4255257726883	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGTGTGGAGTCTTG	NA	False	NA	-3	True	AATAAA	-42	NA	136934474	136923377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_136925402_136926201_136927076_136927165_136927276_136927837_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416
ES.20184.9	chr2	-	5770	26	NNC	ENSMUSG00000027276.8	novel	5612	26	NA	NA	-121	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	28.0870076725877	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGTGTGGAGTCTTG	NA	False	NA	-3	True	AATAAA	-42	NA	136958685	136923377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931092_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ES.20185.1	chr2	+	4965	1	Intergenic	novelGene_16692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	137877186	137882151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_137877200_137882200
ES.20186.1	chr2	+	4692	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	-28	-7	-28	7	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAGTATTTTTGTTGC	NA	False	NA	23	True	AATAAA	-24	NA	138098456	138129349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
ES.20186.2	chr2	+	2145	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	-26	2538	-26	-2538	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAGCAAA	NA	False	NA	NA	False	TTTAAA	-18	NA	138098458	138126804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
ES.20186.3	chr2	+	4063	1	NIC	ENSMUSG00000062098.12	novel	4657	5	NA	NA	4865	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTGCTTTTTTAGTAT	NA	False	NA	14	True	AATAAA	-15	NA	138125277	138129340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_138125300_138129300
ES.20187.1	chr2	-	3454	1	Intergenic	novelGene_16693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAGAACAAAAAAAA	7182	False	NA	NA	False	NA	NA	NA	138105017	138101563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_138101600_138105000
ES.20188.1	chr2	+	804	2	Intergenic	novelGene_16694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	823	False	NA	NA	False	NA	NA	NA	138366449	138367298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_138367226_138367270
ES.20189.1	chr2	-	2241	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	18	-1	-2	1	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTGTGACTGCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	139908707	139675398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.10	chr2	-	1846	8	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	8	143048	8	4	5prime_fragment	FALSE	canonical	3	57	junction_2	18.1186565254081	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGTGTTTGCCCATT	NA	False	NA	NA	False	NA	NA	NA	139908697	139818447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.11	chr2	-	2001	8	ISM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-2	143145	-2	-93	5prime_fragment	FALSE	canonical	3	23	junction_7	25.9253244720214	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTGCATATTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	139908682	139818544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.12	chr2	-	1158	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	-2	-32019	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.817090896381	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATCTTGGATATAAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	139908682	139850470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139850740_139872520_139872784_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.13	chr2	-	2757	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	3	-47566	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	45.538555093459	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTATTTTCACTG	NA	False	NA	NA	False	AATAAA	-18	NA	139908702	139866017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139872520_139872784_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.14	chr2	-	2711	5	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	24	-47570	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	43.6713578904984	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTTGTTGTATTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	139908656	139866021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.15	chr2	-	2564	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	-2	-47570	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	45.538555093459	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTTGTTGTATTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	139908707	139866021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139869146_139869216_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.16	chr2	-	2804	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	-2	-47572	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.817090896381	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGTTTTGTTGTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	139908682	139866023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139869146_139869216_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.17	chr2	-	2211	6	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	1	-48356	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.817090896381	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGATGTCTTATTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	139908679	139866807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139872520_139872784_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.18	chr2	-	1760	1	Intergenic	novelGene_16695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGATGTCTTATTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	139868568	139866808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_139866800_139868600
ES.20189.19	chr2	-	1389	5	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	9260	-48906	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.7955460645911	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCTGATATTTTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	139899420	139867357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139868133_139872520_139872784_139884013_139884083_139890161_139890230_139899206
ES.20189.2	chr2	-	2482	14	FSM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-2	0	-2	0	multi-exon	FALSE	canonical	3	23	junction_13	23.0823070642491	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908682	139675399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.20	chr2	-	4756	5	NNC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	-6	-49964	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.8770521885197	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATTCTGGCTAGCAAA	NA	False	NA	NA	False	TATAAA	-15	NA	139908711	139868415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139872784_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.21	chr2	-	4920	1	NIC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	-3	-85337	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAGTGGGAAAATGAG	NA	False	NA	NA	False	AAAAAG	-11	NA	139908708	139903788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139903800_139908700
ES.20189.3	chr2	-	2399	13	NIC	ENSMUSG00000039033.12	novel	2480	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	27.2441380035331	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908679	139675399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.5	chr2	-	2114	13	NIC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	25.9469276708352	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTGTGTGACTGCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	139908703	139675400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.6	chr2	-	2342	15	NNC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.6262431927216	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTGTGTGACTGCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	139908694	139675400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139676368_139699621_139699696_139723992_139724109_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.7	chr2	-	2407	8	ISM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	-2	142739	-2	313	5prime_fragment	FALSE	canonical	3	23	junction_7	25.9253244720214	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTATTTTCTCAGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	139908682	139818138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ES.20189.8	chr2	-	2075	7	NIC	ENSMUSG00000039033.12	novel	2127	13	NA	NA	5	310	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	30.799080072842	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGGTATTTTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	139908700	139818141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.20189.9	chr2	-	1786	7	NIC	ENSMUSG00000039033.12	novel	2258	14	NA	NA	-6	10	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	30.799080072842	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGCCCATTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	139908711	139818441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139819634_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ES.2019.1	chr1	-	2499	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-49	-1	-49	1	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTATATGTGTGTT	7829	False	NA	NA	False	AATAAA	-16	NA	179373881	179355618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ES.2019.10	chr1	-	3530	3	NNC	ENSMUSG00000026492.12	novel	406	5	NA	NA	270	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	179360962	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179356920_179357094_179357232_179358868
ES.2019.11	chr1	-	1893	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-33	589	-33	288	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGCAAAAAAAAAAAAAACTC	7845	False	NA	NA	False	NA	NA	NA	179373865	179356208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ES.2019.12	chr1	-	5904	2	NNC	ENSMUSG00000026492.12	novel	458	2	NA	NA	-1199	288	intron_retention	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGCAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	179362461	179356208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179357677_179358025
ES.2019.13	chr1	-	1594	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	-19	874	-19	3	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTTTTAAAGTACTCT	7859	False	NA	NA	False	AATAAA	-34	NA	179373851	179356493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ES.2019.14	chr1	-	3509	2	ISM	ENSMUSG00000026492.12	ENSMUST00000139993.8	406	5	-696	-357	-696	-4	intron_retention	FALSE	canonical	3	69	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTACTTTGTTTTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	179361958	179356500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_179356920_179358868
ES.2019.15	chr1	-	157	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATTAATAAACAT	NA	False	NA	NA	False	NA	NA	NA	179360685	179360528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179360500_179360700
ES.2019.2	chr1	-	3922	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-17	1	intron_retention	FALSE	canonical	3	69	junction_1	7.36545993132812	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTATATGTGTGTT	7911	False	NA	NA	False	AATAAA	-16	NA	179373799	179355618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179359629_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ES.2019.3	chr1	-	4841	6	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-51	1	intron_retention	FALSE	canonical	3	69	junction_1	7.18331399842719	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTATATGTGTGTT	7827	False	NA	NA	False	AATAAA	-16	NA	179373883	179355618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179359629_179361288_179365263_179365413_179369871_179370023_179372462
ES.2019.4	chr1	-	2350	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	27.6008252694653	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7887	False	NA	NA	False	AATAAA	-14	NA	179373823	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179373386
ES.2019.5	chr1	-	2388	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	26.8886593194975	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7875	False	NA	NA	False	AATAAA	-14	NA	179373835	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ES.2019.6	chr1	-	2259	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	37.9195053882417	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7921	False	NA	NA	False	AATAAA	-14	NA	179373789	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179369871_179370023_179372931_179373024_179373386
ES.2019.7	chr1	-	2425	8	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.3688586231548	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7904	False	NA	NA	False	AATAAA	-14	NA	179373806	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372931_179373024_179373386
ES.2019.8	chr1	-	4733	6	NNC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_4	32.0087488040379	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7862	False	NA	NA	False	AATAAA	-14	NA	179373848	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179356920_179358868_179361288_179365263_179365413_179369871_179370023_179372298_179372552_179373386
ES.2019.9	chr1	-	2698	9	NNC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	33.3239309655989	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGTGTATATGTGTG	7841	False	NA	NA	False	AATAAA	-14	NA	179373869	179355620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179370489_179370703_179372462_179372552_179373386
ES.20190.1	chr2	+	223	1	Intergenic	novelGene_16696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATCTTGGTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	139947442	139947665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_139947400_139947700
ES.20191.1	chr2	+	305	1	Intergenic	novelGene_16698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140000059	140000364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_140000100_140000400
ES.20192.1	chr2	+	211	1	Intergenic	novelGene_16699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTACCTATTTGTAGT	NA	False	NA	NA	False	AATGAA	-8	NA	140000788	140000999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_140000800_140001000
ES.20193.1	chr2	+	1152	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	16	-2	16	2	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTTGAAGCAAGGTGCA	NA	False	NA	12	True	AATAAA	-23	NA	140012584	140045611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ES.20193.10	chr2	+	1066	11	NNC	ENSMUSG00000027384.7	novel	1200	11	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	100.471687554256	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCCCAGAATTTTC	NA	False	NA	16	True	AATAAA	-16	NA	140012948	140045557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140013175_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044774_140044870_140045207_140045291_140045451
ES.20193.11	chr2	+	1050	11	NNC	ENSMUSG00000027384.7	novel	1200	11	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	76.7072356430604	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012952	140045556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140013175_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ES.20193.2	chr2	+	1435	10	NIC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	16	4	intron_retention	FALSE	canonical	3	226	junction_9	17.0800584033465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012584	140045556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140045291_140045451
ES.20193.3	chr2	+	1185	12	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	26	6	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_8	93.0171938251603	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCCCAGAATTTTCA	NA	False	NA	17	True	AATAAA	-17	NA	140012594	140045558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140041284_140041381_140044785_140044870_140045207_140045291_140045451
ES.20193.4	chr2	+	1095	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	30	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	76.9196983873442	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCCCAGAATTTTC	NA	False	NA	16	True	AATAAA	-16	NA	140012598	140045557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044774_140044870_140045207_140045291_140045451
ES.20193.5	chr2	+	1168	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	-29	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.3821684886124	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCCCAGAATTTTCAT	NA	False	NA	18	True	AATAAA	-18	NA	140012603	140045559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044957_140045207_140045291_140045451
ES.20193.6	chr2	+	4577	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	76.0408442877905	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012605	140045556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140041284_140044870_140045207_140045291_140045451
ES.20193.7	chr2	+	1046	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012613	140045556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ES.20193.8	chr2	+	1850	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	46	-730	-18	730	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTGAGGATCTTGCCGGC	NA	False	NA	NA	False	TTTAAA	-14	NA	140012614	140046339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ES.20193.9	chr2	+	1058	11	NNC	ENSMUSG00000027384.7	novel	1200	11	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	97.2399609214237	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCCCAGAATTTT	NA	False	NA	15	True	AATAAA	-15	NA	140012922	140045556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140013175_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ES.20194.1	chr2	-	3402	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	1	6092	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	105.163550952693	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAACTCAATTATCAATA	6978	False	NA	NA	False	NA	NA	NA	140012483	139955710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139955726_139961810_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.10	chr2	-	3453	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	136.877291239792	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6950	False	NA	-12	True	AATAAA	-16	NA	140012511	139961802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140011045_140011076_140012396
ES.20194.14	chr2	-	5275	14	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	107.877533018592	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCCGTTTGTATAGC	6988	False	NA	-15	True	AATAAA	-13	NA	140012473	139961805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140012073_140012200
ES.20194.16	chr2	-	3308	4	NIC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	15645	-5	intron_retention	FALSE	canonical	3	401	junction_1	4.24264068711928	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTACCCGTTTGTATA	NA	False	NA	-17	True	AATAAA	-11	NA	139981580	139961807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139962826_139965450_139966925_139971119_139971208_139980852
ES.20194.17	chr2	-	3222	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	161	13	-161	multi-exon	FALSE	canonical	3	379	junction_8	12.585330053057	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATGTAGTACCTTAAT	6990	False	NA	NA	False	AATAAA	-16	NA	140012471	139961963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.18	chr2	-	2811	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	18	567	18	-567	multi-exon	FALSE	canonical	3	379	junction_8	12.585330053057	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTGTTTGGTTCCCAGC	6995	False	NA	NA	False	NA	NA	NA	140012466	139962369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.19	chr2	-	2023	10	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	18	19070	18	9857	5prime_fragment	FALSE	canonical	3	379	junction_4	14.7857121556798	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACTGAAAAAGAAACAGAAG	6995	False	NA	NA	False	AAGAAA	-11	NA	140012466	139980872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.2	chr2	-	180	1	Intergenic	novelGene_16697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	139961694	139961514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_139961500_139961700
ES.20194.20	chr2	-	1915	9	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	-8	28902	-8	25	5prime_fragment	FALSE	canonical	3	379	junction_3	15.6823945875622	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATATGGAAATGGAAATCA	6969	False	NA	NA	False	NA	NA	NA	140012492	139990704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.21	chr2	-	5053	8	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	23	31612	23	-2685	5prime_fragment	FALSE	canonical	3	379	junction_2	16.6034174008773	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCAGTGGTCCTTCTA	7000	False	NA	NA	False	AATAAA	-40	NA	140012461	139993414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.22	chr2	-	1737	7	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	25	37039	25	-1	5prime_fragment	FALSE	canonical	3	379	junction_1	17.8271017149607	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAAAGGAAAA	7002	False	NA	NA	False	NA	NA	NA	140012459	139998841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.23	chr2	-	172	1	Intergenic	novelGene_16700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAACATGTAGAGT	NA	False	NA	NA	False	NA	NA	NA	140004636	140004464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_140004500_140004600
ES.20194.24	chr2	-	2357	3	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	-21	43136	-21	-3656	5prime_fragment	FALSE	canonical	3	408	junction_1	13	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAAAACATAAGGACCT	6956	False	NA	NA	False	NA	NA	NA	140012505	140004938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_140006503_140009691_140010376_140012396
ES.20194.25	chr2	-	7516	1	NIC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	29	-3657	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGGAAAACATAAGGACC	7006	False	NA	NA	False	NA	NA	NA	140012455	140004939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_140004900_140012500
ES.20194.3	chr2	-	3797	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	-382	-19	-382	19	multi-exon	FALSE	canonical	3	379	junction_8	12.585330053057	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTCGTTGTATGC	6595	False	NA	7	True	AATAAA	-35	NA	140012866	139961783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.4	chr2	-	3530	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	139.493837183744	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGTTTGTATAGCATTG	7006	False	NA	-11	True	AATAAA	-17	NA	140012455	139961801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140011045_140011208_140012396
ES.20194.5	chr2	-	3855	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	-366	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	136.877291239792	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGTTTGTATAGCATTG	6611	False	NA	-11	True	AATAAA	-17	NA	140012850	139961801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140010983_140011076_140012396
ES.20194.6	chr2	-	3425	14	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.92611903618	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGTTTGTATAGCATTG	6978	False	NA	-11	True	AATAAA	-17	NA	140012483	139961801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965627_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ES.20194.7	chr2	-	3346	1	NIC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	32077	0	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	NA	False	NA	-12	True	AATAAA	-16	NA	139965148	139961802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_139961800_139965100
ES.20194.8	chr2	-	3494	14	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	107.34669817683	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6990	False	NA	-12	True	AATAAA	-16	NA	140012471	139961802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012285
ES.20195.1	chr2	-	180	1	Intergenic	novelGene_16701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	140050153	140049973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_140050000_140050200
ES.20196.1	chr2	-	161	1	Intergenic	novelGene_16702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAGTAAATCTTTAAAAA	938	False	NA	NA	False	NA	NA	NA	140169610	140169449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_140169400_140169600
ES.20197.1	chr2	+	3719	4	FSM	ENSMUSG00000068205.15	ENSMUST00000110062.8	3554	4	-17	-148	-17	145	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTAGTGGTTAGTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	140237332	140265019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ES.20197.2	chr2	+	1105	4	FSM	ENSMUSG00000068205.15	ENSMUST00000110062.8	3554	4	-14	2463	-14	-7	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTATGATTCCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	140237335	140262408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ES.20197.3	chr2	+	2939	5	NNC	ENSMUSG00000068205.15	novel	3554	4	NA	NA	-6	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.8205347305616	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTCTAGTGGTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	140237343	140265015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824_140262905_140263669
ES.20197.4	chr2	+	2880	4	NNC	ENSMUSG00000068205.15	novel	3554	4	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	29.6010510323911	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTATGATTCCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	140237375	140262408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_140237642_140242781_140242899_140258921_140260835_140261824
ES.20197.5	chr2	+	6204	3	NIC	ENSMUSG00000068205.15	novel	3554	4	NA	NA	1	-7	intron_retention	FALSE	canonical	3	66	junction_2	9	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTATGATTCCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	140237376	140262408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_140242899_140260736_140260835_140261824
ES.20197.6	chr2	+	3527	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	26	-1	1	1	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTATTATTTGGTT	NA	False	NA	NA	False	AATAAA	-23	NA	140237380	140264875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ES.20198.1	chr2	+	158	1	Intergenic	novelGene_16703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	140294899	140295057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_140294900_140295100
ES.20199.1	chr2	-	3978	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	-1	0	1	multi-exon	FALSE	canonical	3	47	junction_1	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTATCCTTTTTACTT	NA	False	NA	2	True	AATAAA	-37	NA	140513389	140500116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140505180_140505380_140513165
ES.20199.10	chr2	-	2836	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	36	1105	17	22	multi-exon	FALSE	canonical	3	47	junction_1	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGCTGGATGACAAAATA	NA	False	NA	NA	False	AATACA	-27	NA	140513353	140501222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140505180_140505380_140513165
ES.20199.11	chr2	-	4209	1	NIC	ENSMUSG00000051379.13	novel	739	4	NA	NA	-19	-7886	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTTCGTGTTGGAGGA	NA	False	NA	NA	False	CATAAA	-20	NA	140513339	140509130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_140509100_140513300
ES.20199.12	chr2	-	2668	1	NIC	ENSMUSG00000051379.13	novel	739	4	NA	NA	2	-9456	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTCTGCATTCTCGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	140513368	140510700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_140510700_140513400
ES.20199.2	chr2	-	4508	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-50	-1124	0	-3	multi-exon	FALSE	canonical	3	10	junction_1	29	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTGTATCCTTTTT	NA	False	NA	-2	True	AATAAA	-33	NA	140513370	140500120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140504627_140505380_140513165
ES.20199.3	chr2	-	4129	4	NNC	ENSMUSG00000051379.13	novel	3977	3	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.9777695412228	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTGTATCCTTTTT	NA	False	NA	-2	True	AATAAA	-33	NA	140513387	140500120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_140503672_140504627_140504785_140505180_140505380_140513165
ES.20199.4	chr2	-	3837	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	140	0	-140	multi-exon	FALSE	canonical	3	47	junction_1	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTGCTTGCTTTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	140513389	140500257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140505180_140505380_140513165
ES.20199.5	chr2	-	4384	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-67	-983	2	-144	multi-exon	FALSE	canonical	3	10	junction_1	29	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATTGTGCTTGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	140513387	140500261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140504627_140505380_140513165
ES.20199.6	chr2	-	3970	4	NNC	ENSMUSG00000051379.13	novel	3977	3	NA	NA	3	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.9777695412228	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATAATTGTGCTTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	140513367	140500262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_140503672_140504627_140504788_140505180_140505380_140513165
ES.20199.7	chr2	-	3981	4	NNC	ENSMUSG00000051379.13	novel	3977	3	NA	NA	3	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.9777695412228	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAACAGAATAATTGT	NA	False	NA	NA	False	AATAAA	-5	NA	140513367	140500270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_140503672_140504627_140504807_140505180_140505380_140513165
ES.20199.8	chr2	-	3684	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	-19	312	-19	-312	multi-exon	FALSE	canonical	3	47	junction_1	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	140513408	140500429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140505180_140505380_140513165
ES.20199.9	chr2	-	4195	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	-47	-814	3	-313	multi-exon	FALSE	canonical	3	10	junction_1	29	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140513367	140500430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_140503672_140504627_140505380_140513165
ES.202.1	chr1	+	177	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25093346	25093523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_25093300_25093500
ES.2020.1	chr1	+	4753	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	-44	0	-44	0	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179373890	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.10	chr1	+	4619	10	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.0815821345606	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179374048	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432658_179433980_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.11	chr1	+	3303	10	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	2	-1273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.0815821345606	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTTGTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	179374065	179453770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433981_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.12	chr1	+	4105	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	142	462	3	-462	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCCCGTGTGATCT	NA	False	NA	NA	False	AAGAAA	-38	NA	179374076	179454581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.13	chr1	+	5747	10	NIC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	32	junction_7	8.19364402870517	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179374076	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.15	chr1	+	4575	11	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	1890	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8521291945278	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179375963	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179376077_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.16	chr1	+	5868	9	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	1937	-7	intron_retention	FALSE	canonical	0	0	junction_1	17.0440605490593	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGTCTCCGAGAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	179376010	179455036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179376077_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.3	chr1	+	3529	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	52	1128	52	-1128	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGTTATGTTCTGTTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	179373986	179453915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.5	chr1	+	4647	10	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.0815821345606	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179373994	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433981_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.6	chr1	+	6303	8	NIC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	-36	-7	intron_retention	FALSE	canonical	3	32	junction_5	8.77380144730519	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATGTCTCCGAGAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	179374027	179455036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.7	chr1	+	4736	12	NNC	ENSMUSG00000038949.9	novel	4709	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1846184944309	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179374031	179455043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179374182_179405776_179405901_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.8	chr1	+	3944	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	100	665	-29	-665	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCATATGTAACATAGGT	NA	False	NA	NA	False	TATAAA	-19	NA	179374034	179454378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.2020.9	chr1	+	3809	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	105	795	-24	-795	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGTATAGATCAGAGTT	NA	False	NA	NA	False	CATAAA	-14	NA	179374039	179454248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ES.20200.1	chr2	-	188	1	Intergenic	novelGene_16704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGTCCCATTGGTG	NA	False	NA	NA	False	AATAAA	-8	NA	141019416	141019228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_141019200_141019400
ES.20201.1	chr2	-	1153	3	Antisense	novelGene_ENSMUSG00000068205.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGATTATTGTGGTC	NA	False	NA	NA	False	TATAAA	-19	NA	141260903	141228616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_141229457_141260475_141260631_141260745
ES.20202.1	chr2	+	176	1	Intergenic	novelGene_16705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTATTT	NA	False	NA	NA	False	NA	NA	NA	141412427	141412603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_141412400_141412600
ES.20203.1	chr2	+	4026	1	Intergenic	novelGene_16706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATACATCTGAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	142468747	142472773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_142468700_142472800
ES.20204.1	chr2	+	157	1	Intergenic	novelGene_16707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAATAATAT	NA	False	NA	NA	False	NA	NA	NA	142697613	142697770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_142697600_142697800
ES.20205.1	chr2	+	158	1	Intergenic	novelGene_16708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	142734694	142734852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_142734700_142734900
ES.20206.1	chr2	-	9926	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	85	-3628	-2	3628	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTTCTTTTCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	142743366	142455765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.10	chr2	-	5260	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	-60	1183	-60	54	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCAGTTTAAGTTTGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	142743511	142460576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.11	chr2	-	5067	26	NNC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-29	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.5158958735461	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTAGTTCAGTTTAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	142743393	142460581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690282_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.13	chr2	-	5070	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	0	47	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	17.7575785855567	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGTAGTTCAGTTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	142743451	142460583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142490347_142490432_142514208_142514299_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.14	chr2	-	4852	24	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-23	46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	24.1444925757227	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTGTAGTTCAGTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	142743387	142460584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142490347_142490432_142514208_142514299_142544542_142544594_142545861_142545959_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.15	chr2	-	5132	27	FSM	ENSMUSG00000038844.11	ENSMUST00000230763.2	6404	27	41	1231	-34	6	multi-exon	FALSE	canonical	0	0	junction_9	23.8304228509365	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGCTGCTATCAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	142743398	142460624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142556981_142557015_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.16	chr2	-	4967	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.7755381636142	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTGAGCTGCTATC	NA	False	NA	NA	False	ATTAAA	-19	NA	142743359	142460627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142490347_142490432_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.18	chr2	-	4665	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	-6	1724	-6	-487	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGAGTCTTCCATGCC	NA	False	NA	NA	False	AGTAAA	-21	NA	142743457	142461117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.19	chr2	-	4485	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-2	-492	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.7234534296783	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGAGAAGAGTCTTCC	NA	False	NA	NA	False	AGTAAA	-16	NA	142743366	142461122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.2	chr2	-	6326	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	52	5	-35	-5	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTACAGTTACCTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	142743399	142459398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.20	chr2	-	6474	27	NNC	ENSMUSG00000038844.11	novel	6404	27	NA	NA	-32	-494	intron_retention	FALSE	canonical	0	0	junction_9	31.0792078368049	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATCATGAGAAGAGTCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	142743396	142461124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142556981_142557015_142581442_142581532_142582828_142582912_142590704_142590879_142598008_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.21	chr2	-	3991	25	NNC	ENSMUSG00000038844.11	novel	6404	27	NA	NA	-28	28845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.7234534296783	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAATTGCAAGGCCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	142743392	142512003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_142512198_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.22	chr2	-	4443	24	NNC	ENSMUSG00000038844.11	novel	6404	27	NA	NA	-23	9846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0778922718148	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAATAACTATAA	NA	False	NA	NA	False	NA	NA	NA	142743387	142531002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_142531744_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.23	chr2	-	3892	21	ISM	ENSMUSG00000038844.11	ENSMUST00000211861.2	4523	23	-20	4646	-20	-4357	5prime_fragment	FALSE	canonical	3	64	junction_9	8.42184659086118	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTTTATGATACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	142743384	142545494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.3	chr2	-	6134	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	53	196	-34	-196	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATGCATCATTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	142743398	142459589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.4	chr2	-	5566	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	63	754	-24	483	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATGGGTCATTTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	142743388	142460147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.5	chr2	-	5559	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	-39	863	-39	374	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTATGCTTCTCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	142743490	142460256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.6	chr2	-	5312	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-32	344	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	17.7575785855567	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACGGACTCTTTATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	142743396	142460286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142490347_142490432_142514208_142514299_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.7	chr2	-	5302	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	49	1032	37	205	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTGCATTCAGTCTTC	NA	False	NA	NA	False	AATGAA	-13	NA	142743402	142460425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.8	chr2	-	5289	26	NNC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-32	205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	18.3688431862216	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTGCATTCAGTCTTC	NA	False	NA	NA	False	AATGAA	-13	NA	142743396	142460425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600823_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20206.9	chr2	-	5059	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	-30	54	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.7234534296783	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCAGTTTAAGTTTGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	142743394	142460576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_142461837_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ES.20207.1	chr2	-	181	1	Intergenic	novelGene_16709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGATAAAAAAGG	5311	False	NA	NA	False	NA	NA	NA	142832911	142832730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_142832700_142832900
ES.20208.1	chr2	+	995	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	-31	1097	-31	-1097	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCCTATCATCACTTAT	1957	False	NA	29	True	AATAAA	-29	NA	142904927	142913676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.10	chr2	+	1756	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	33	-1108	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	372.698157584213	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTATTGTCCTA	2113	False	NA	18	True	AATAAA	-18	NA	142905083	142913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142905947_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.11	chr2	+	2290	5	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	138	-1110	intron_retention	FALSE	canonical	3	36	junction_2	434.225963641052	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACTGGTTTATTGTCC	3489	False	NA	16	True	AATAAA	-16	NA	142906459	142913663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142906551_142907095_142907269_142910246_142910322_142911293_142912897_142913315
ES.20208.12	chr2	+	3103	4	FSM	ENSMUSG00000008333.13	ENSMUST00000134091.2	1827	4	-2392	1116	1379	-1116	multi-exon	FALSE	canonical	3	918	junction_3	66.5549063221905	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTTACTGGTTTA	4730	False	NA	10	True	AATAAA	-10	NA	142907700	142913657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.13	chr2	+	3281	2	ISM	ENSMUSG00000008333.13	ENSMUST00000134091.2	1827	4	-680	1108	-680	-1108	intron_retention	FALSE	canonical	3	1037	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTATTGTCCTA	6442	False	NA	18	True	AATAAA	-18	NA	142909412	142913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_142910322_142911293
ES.20208.2	chr2	+	1849	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	212	0	-212	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACTATTTCTTAGTA	1988	False	NA	NA	False	AATACA	-9	NA	142904958	142914561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.3	chr2	+	1266	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	795	0	-795	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGCTTTTTTCAGAAG	1988	False	NA	18	True	AATAAA	-19	NA	142904958	142913978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.4	chr2	+	864	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	-5	-1114	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	371.205431294078	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTTACTGGTTTATT	2005	False	NA	12	True	AATAAA	-12	NA	142904975	142913659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142905019_142906461_142906551_142907095_142907269_142910246_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.5	chr2	+	3499	6	NIC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	784	junction_1	114.700305143448	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACAAAACTATTCTGA	2009	False	NA	NA	False	AATAAA	-15	NA	142904979	142914769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142912897_142913315
ES.20208.6	chr2	+	1238	7	NNC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	12	-795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	384.030561573193	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGCTTTTTTCAGAAG	2022	False	NA	18	True	AATAAA	-19	NA	142904992	142913978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142905019_142906461_142906551_142907095_142907269_142910174_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.7	chr2	+	5294	5	NIC	ENSMUSG00000008333.13	novel	2061	7	NA	NA	12	-1108	intron_retention	FALSE	canonical	3	784	junction_1	126.667626092858	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTATTGTCCTA	2022	False	NA	18	True	AATAAA	-18	NA	142904992	142913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_142905019_142906461_142906551_142907095_142910322_142911293_142912897_142913315
ES.20208.8	chr2	+	1138	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	-30	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	366.493140757398	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTATTGTCCTA	2050	False	NA	18	True	AATAAA	-18	NA	142905020	142913665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142905266_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20208.9	chr2	+	1445	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	-26	-797	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	366.493140757398	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTGCTTTTTTCAGA	2054	False	NA	16	True	AATAAA	-17	NA	142905024	142913976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_142905266_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ES.20209.1	chr2	-	322	1	Intergenic	novelGene_16710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTACTTCAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	142917641	142917319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_142917300_142917600
ES.2021.1	chr1	-	276	1	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATGTGCTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	179476407	179476131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179476100_179476400
ES.20210.1	chr2	+	177	1	Intergenic	novelGene_16711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142955561	142955738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_142955600_142955700
ES.20211.1	chr2	-	172	1	Intergenic	novelGene_16712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	143004549	143004377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_143004400_143004500
ES.20212.1	chr2	-	177	1	Intergenic	novelGene_16713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTTACAAGAAC	NA	False	NA	NA	False	NA	NA	NA	143029284	143029107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_143029100_143029300
ES.20213.1	chr2	+	431	1	ISM	ENSMUSG00000027419.10	ENSMUST00000028905.10	4723	12	267436	2263	267321	-2263	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTATGTCCTATGTGT	NA	False	NA	-2	True	AATATA	-12	NA	143655511	143655942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_143655500_143655900
ES.20214.1	chr2	-	161	1	Intergenic	novelGene_16714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGAGATTACAAA	NA	False	NA	NA	False	NA	NA	NA	143708838	143708677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_143708700_143708800
ES.20215.1	chr2	+	142	1	Intergenic	novelGene_16715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGGAAGAAGGCACAGAAA	NA	False	NA	NA	False	NA	NA	NA	143755816	143755958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_143755800_143756000
ES.20216.1	chr2	+	2045	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	-133	-1	-133	1	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTTGTGTGGTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	143757106	143785245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ES.20216.10	chr2	+	1818	5	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	232	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	772.925610909614	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTTTGTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143757471	143785243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_143757568_143780304_143780613_143781871_143781949_143782295_143782436_143784046
ES.20216.11	chr2	+	1888	5	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	408	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	725.326133542698	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTTTCTTTGTGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	143757647	143785242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_143757781_143758433_143758608_143780304_143780613_143781871_143781949_143784046
ES.20216.12	chr2	+	1715	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	12218	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	682.117780641046	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTTTGTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143769457	143785243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_143769591_143780304_143780613_143781871_143781949_143784046
ES.20216.2	chr2	+	747	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	171	993	171	-993	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATTTGTCTTGTCATCT	NA	False	NA	17	True	AGTAAA	-29	NA	143757410	143784251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ES.20216.3	chr2	+	3833	3	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	175	1	175	-1	intron_retention	FALSE	canonical	3	1386	junction_2	146	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTTTGTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143757414	143785243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_143757568_143780304_143780613_143781871
ES.20216.5	chr2	+	922	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	192	797	192	-797	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGGCAGTATGACGAGA	NA	False	NA	85	True	AAAACA	-2	NA	143757431	143784447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ES.20216.6	chr2	+	5002	1	NIC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	204	-22799	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCTGAATATGATTGTC	NA	False	NA	NA	False	NA	NA	NA	143757443	143762445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_143757400_143762400
ES.20216.7	chr2	+	1677	4	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	230	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	684.4683257017	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTTTGTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143757469	143785243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_143757572_143780311_143780613_143781871_143781949_143784046
ES.20216.8	chr2	+	1826	5	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	230	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	772.677932582522	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTTTGTGTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143757469	143785243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_143757568_143780304_143780613_143781871_143781949_143782048_143782195_143784046
ES.20216.9	chr2	+	1437	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	232	242	232	-242	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTGGAAGGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	143757471	143785002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ES.20217.1	chr2	-	2910	1	Intergenic	novelGene_16716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143764037	143761127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_143761100_143764000
ES.20217.2	chr2	-	144	1	Intergenic	novelGene_16717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143762699	143762555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_143762600_143762700
ES.20218.1	chr2	-	2974	1	Antisense	novelGene_ENSMUSG00000015932.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCCAAAG	NA	False	NA	NA	False	NA	NA	NA	143781122	143778148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_143778100_143781100
ES.20219.1	chr2	-	5208	24	FSM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	-30	-1	-30	1	multi-exon	FALSE	canonical	3	227	junction_23	53.514586460919	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTCTGTCTGATCTTC	9728	False	NA	0	True	ATTAAA	-21	NA	143853213	143789313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.10	chr2	-	5103	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9791	False	NA	-1	True	ATTAAA	-20	NA	143853150	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830636_143830676_143832187_143852918
ES.20219.11	chr2	-	5136	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	436	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_23	85.8599994671944	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	7727	False	NA	-1	True	ATTAAA	-20	NA	143852747	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852523
ES.20219.12	chr2	-	4528	26	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-6453	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	139.215550855499	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	False	NA	-2	True	ATTAAA	-19	NA	143831538	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143826899_143826956_143827056_143827171_143827994_143828090_143830067
ES.20219.13	chr2	-	5158	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-12	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9746	False	NA	-2	True	ATTAAA	-19	NA	143853195	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830787_143830816_143832187_143852918
ES.20219.14	chr2	-	5165	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	87.8115140729319	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9781	False	NA	-2	True	ATTAAA	-19	NA	143853160	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794208_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.15	chr2	-	5066	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	49	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9807	False	NA	-2	True	ATTAAA	-19	NA	143853134	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830552_143830612_143832187_143852918
ES.20219.17	chr2	-	4552	12	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-1768	-1	intron_retention	FALSE	canonical	3	330	junction_8	33.2483765837453	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	False	NA	-2	True	ATTAAA	-19	NA	143801333	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143797127_143798687_143798781_143799474
ES.20219.18	chr2	-	5597	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	740	-1	intron_retention	FALSE	canonical	0	0	junction_22	110.707588413465	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	8031	False	NA	-2	True	ATTAAA	-19	NA	143852443	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143845739_143845850_143851943
ES.20219.19	chr2	-	4459	20	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-7053	-1	intron_retention	FALSE	canonical	3	237	junction_13	45.6408962745297	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	False	NA	-2	True	ATTAAA	-19	NA	143816566	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143792444_143794111_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380
ES.20219.2	chr2	-	4993	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	65	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	109.333206300739	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9823	False	NA	-1	True	ATTAAA	-20	NA	143853118	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794197_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143831341_143831460_143832187_143852918
ES.20219.20	chr2	-	5090	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9771	False	NA	-2	True	ATTAAA	-19	NA	143853170	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830558_143830630_143832187_143852918
ES.20219.24	chr2	-	2880	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-57	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	88.880177488646	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	False	NA	-2	True	ATTAAA	-19	NA	143825142	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143825054
ES.20219.25	chr2	-	5139	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	89.8921218615893	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9789	False	NA	-2	True	ATTAAA	-19	NA	143853152	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797117_143798683_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.26	chr2	-	3211	22	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-5407	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	108.020847068335	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	False	NA	-2	True	ATTAAA	-19	NA	143830492	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797124_143798687_143798781_143799474_143799566_143805133_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
ES.20219.29	chr2	-	3059	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	85.5170105353847	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	9756	False	NA	-2	True	ATTAAA	-19	NA	143853185	143789315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143852918
ES.20219.3	chr2	-	5104	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9770	False	NA	-1	True	ATTAAA	-20	NA	143853171	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830567_143830627_143832187_143852918
ES.20219.31	chr2	-	4926	22	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-7010	-2	intron_retention	FALSE	canonical	3	309	junction_19	38.639328829915	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	NA	False	NA	-3	True	ATTAAA	-18	NA	143832095	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
ES.20219.32	chr2	-	5141	23	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	89.4609776881832	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	9787	False	NA	-3	True	ATTAAA	-18	NA	143853154	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805135_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.34	chr2	-	5085	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	32	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	112.686912570406	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	9790	False	NA	-3	True	ATTAAA	-18	NA	143853151	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799597_143805161_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830582_143830639_143832187_143852918
ES.20219.35	chr2	-	5223	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.0693574418869	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	9787	False	NA	-3	True	ATTAAA	-18	NA	143853154	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795327_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.37	chr2	-	3354	23	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-5524	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.9552422511846	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	NA	False	NA	-3	True	ATTAAA	-18	NA	143830609	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791310_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067
ES.20219.38	chr2	-	5045	23	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.892765281519	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGGTTCTGTCTGATC	9786	False	NA	-3	True	ATTAAA	-18	NA	143853155	143789316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791283_143791591_143791676_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.39	chr2	-	4943	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-12	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGGTTCTGTCTGAT	9746	False	NA	-4	True	ATTAAA	-17	NA	143853195	143789317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830903_143831145_143832187_143852918
ES.20219.4	chr2	-	5100	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	89.4297013726609	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9739	False	NA	-1	True	ATTAAA	-20	NA	143853202	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.41	chr2	-	1777	15	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	4450	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	139.444396789252	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGGTTCTGTCTGAT	NA	False	NA	-4	True	ATTAAA	-17	NA	143805063	143789317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798691_143798781_143799474_143799566_143805030
ES.20219.42	chr2	-	3656	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-5936	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	87.0715977687111	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGGTTCTGTCTGAT	NA	False	NA	-4	True	ATTAAA	-17	NA	143831021	143789317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830539_143830626
ES.20219.44	chr2	-	3658	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-5936	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	112.315902719876	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGGTTCTGTCTGAT	NA	False	NA	-4	True	ATTAAA	-17	NA	143831021	143789317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810432_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830546_143830635
ES.20219.45	chr2	-	5124	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-8	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	112.686912570406	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGGTTCTGTCTGAT	9750	False	NA	-4	True	ATTAAA	-17	NA	143853191	143789317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799597_143805160_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830572_143830630_143832187_143852918
ES.20219.47	chr2	-	4901	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-6459	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	110.137051587216	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCACTGGGGTTCTGTCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	143831544	143789319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143827453_143828090_143830067
ES.20219.48	chr2	-	5923	18	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-4511	-5	intron_retention	FALSE	non_canonical	0	0	junction_17	121.141199892599	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCACTGGGGTTCTGTCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	143814024	143789319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143794111_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143812621_143812693
ES.20219.49	chr2	-	1631	13	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	809	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.627406465166	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCACTGGGGTTCTGTCTG	NA	False	NA	-6	True	ATTAAA	-15	NA	143798756	143789319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789839_143790244_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687
ES.20219.51	chr2	-	5113	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCACTGGGGTTCTGTCTG	9757	False	NA	-6	True	ATTAAA	-15	NA	143853184	143789319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830558_143830617_143832187_143852918
ES.20219.53	chr2	-	4886	24	FSM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	-49	340	-49	-340	multi-exon	FALSE	canonical	3	227	junction_23	53.514586460919	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACCTTTGTCACACTTG	9709	False	NA	1	True	AATAAA	-24	NA	143853232	143789654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ES.20219.54	chr2	-	4807	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	422	-343	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_23	85.8599994671944	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAACCTTTGTCACAC	7713	False	NA	-2	True	AATAAA	-21	NA	143852761	143789657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852523
ES.20219.55	chr2	-	4785	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	14	-348	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTAAGAGAACCTTTGT	9772	False	NA	-7	True	AATAAA	-16	NA	143853169	143789662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143831524_143831553_143832187_143852918
ES.20219.57	chr2	-	3395	8	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	36701	13309	-6969	2	internal_fragment	FALSE	canonical	3	237	junction_1	45.1369797258912	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143816482	143802623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380
ES.20219.58	chr2	-	2723	3	FSM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	-32	10	-32	-10	multi-exon	FALSE	canonical	3	17	junction_1	105	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAACAATCCAGGAAG	9726	False	NA	-9	True	AATAAA	-22	NA	143853215	143827782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_143828090_143830067_143832187_143852918
ES.20219.59	chr2	-	4668	2	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	-33	38502	-33	-44	5prime_fragment	FALSE	canonical	3	227	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAGAATAAAGCAATAA	9725	False	NA	-43	True	ATTAAA	-18	NA	143853216	143827816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_143832187_143852918
ES.20219.7	chr2	-	5095	25	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.5776397511747	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9762	False	NA	-1	True	ATTAAA	-20	NA	143853179	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143831311_143831388_143832187_143852918
ES.20219.9	chr2	-	3940	24	NNC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	-6489	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	87.0715977687111	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143831574	143789314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143830498_143830857
ES.2022.1	chr1	+	1607	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	-15	356	-15	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTCAGCTGTTTTTATG	NA	False	NA	23	True	ATTAAA	-34	NA	179495759	179514398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ES.2022.2	chr1	+	1932	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	15	1	15	-1	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCCCCCTTTTTTGG	NA	False	NA	11	True	AATAAA	-18	NA	179495789	179514753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ES.2022.3	chr1	+	4761	10	NIC	ENSMUSG00000038936.14	novel	1948	12	NA	NA	15	-3	intron_retention	FALSE	canonical	3	160	junction_8	17.7854150262039	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	179495789	179514751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260
ES.2022.4	chr1	+	3840	12	NNC	ENSMUSG00000038936.14	novel	1948	12	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.6337825633715	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCATATCTCAGCTGT	NA	False	NA	16	True	ATTAAA	-27	NA	179495796	179514391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179510244_179510463_179511882_179513260_179513343_179514136
ES.2022.5	chr1	+	2707	11	ISM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	32	3	-18	-3	intron_retention	FALSE	canonical	3	160	junction_9	16.8949696655543	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	179495806	179514751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260
ES.2022.6	chr1	+	1601	12	NNC	ENSMUSG00000038936.14	novel	1948	12	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.3331571526539	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTCCCCCTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	179495810	179514751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513371_179514472
ES.2022.8	chr1	+	3483	11	NNC	ENSMUSG00000038936.14	novel	1948	12	NA	NA	82	-4	intron_retention	FALSE	canonical	0	0	junction_9	60.0219959681449	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTAAACTTCATATCTCA	NA	False	NA	11	True	ATTAAA	-22	NA	179495906	179514386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513262_179513343_179514136
ES.20220.1	chr2	+	119	1	Intergenic	novelGene_16718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	967	False	NA	NA	False	NA	NA	NA	143990989	143991108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_143991000_143991100
ES.20220.2	chr2	+	640	3	Antisense	novelGene_ENSMUSG00000074758.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	24	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	1031	False	NA	NA	False	NA	NA	NA	143991053	143998264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_143991331_143997228_143997378_143998050
ES.20220.3	chr2	+	454	2	Antisense	novelGene_ENSMUSG00000074758.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	283	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	1070	False	NA	NA	False	NA	NA	NA	143991092	143998266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_143991331_143998050
ES.20220.4	chr2	+	7167	1	Intergenic	novelGene_16719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	1074	False	NA	NA	False	NA	NA	NA	143991096	143998263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_143991100_143998300
ES.20221.1	chr2	+	173	1	Intergenic	novelGene_16720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAACAGAAACAAACCAG	NA	False	NA	NA	False	NA	NA	NA	144022058	144022231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144022100_144022200
ES.20222.1	chr2	-	180	1	Intergenic	novelGene_16721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAACCAACACA	NA	False	NA	NA	False	NA	NA	NA	144055064	144054884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144054900_144055100
ES.20223.1	chr2	+	171	1	Intergenic	novelGene_16722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	144071220	144071391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144071200_144071400
ES.20224.1	chr2	+	2072	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	236	0	-1	0	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112818	144122436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.10	chr2	+	895	2	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	103	8488	62	-7777	5prime_fragment	FALSE	canonical	3	360	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAAGTCTAGGGTTTT	NA	False	NA	NA	False	TATAAA	-27	NA	144112922	144114659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144112993_144113834
ES.20224.11	chr2	+	2635	4	ISM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	76	2	76	-2	intron_retention	FALSE	canonical	3	60	junction_1	210.252757942012	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGTCTTTCAGTGGA	NA	False	NA	12	True	AATAAA	-14	NA	144112936	144122434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913
ES.20224.12	chr2	+	3693	5	NNC	ENSMUSG00000027424.12	novel	2840	5	NA	NA	78	496	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	209.192943236621	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGGATTGACTTAAAC	NA	False	NA	NA	False	NA	NA	NA	144112938	144123643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144112993_144113834_144114405_144118234_144118452_144120437_144121047_144121400
ES.20224.13	chr2	+	631	2	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	121	8734	80	-8023	5prime_fragment	FALSE	canonical	3	360	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCTGGTTATGTGTGG	NA	False	NA	NA	False	AATATA	-16	NA	144112940	144114413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144112993_144113834
ES.20224.15	chr2	+	2159	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	86	114	86	-114	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGACGGTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	144112946	144122322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.16	chr2	+	5525	3	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	136	-5	95	5	intron_retention	FALSE	canonical	3	360	junction_1	74	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTATTTATAGGGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	144112955	144123152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144112993_144113834_144114405_144118234
ES.20224.17	chr2	+	3187	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	140	-487	99	487	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGATTTACTGGATT	NA	False	NA	NA	False	NA	NA	NA	144112959	144123634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.18	chr2	+	2002	5	NNC	ENSMUSG00000027424.12	novel	2359	5	NA	NA	105	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.895337207466	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTTTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	144112965	144122265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144113183_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.19	chr2	+	1835	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	150	855	109	-144	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	144112969	144122292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.2	chr2	+	1987	5	NNC	ENSMUSG00000027424.12	novel	2308	5	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	216.999279952722	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGTCTTTCAGTGGA	NA	False	NA	12	True	AATAAA	-14	NA	144112834	144122434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144112868_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.20	chr2	+	1759	4	NIC	ENSMUSG00000027424.12	novel	2840	5	NA	NA	109	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	216.766131015792	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTAGTCTTTCAGTGG	NA	False	NA	11	True	AATAAA	-13	NA	144112969	144122433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144112993_144113834_144114405_144120913_144121047_144121400
ES.20224.3	chr2	+	2117	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	15	708	15	3	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTTTCAGTGGACCAGA	NA	False	NA	17	True	AATAAA	-19	NA	144112834	144122439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.4	chr2	+	2408	4	ISM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	252	2	15	-2	intron_retention	FALSE	canonical	3	74	junction_1	203.653300161492	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGTCTTTCAGTGGA	NA	False	NA	12	True	AATAAA	-14	NA	144112834	144122434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913
ES.20224.5	chr2	+	4917	3	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	26	713	-15	-2	intron_retention	FALSE	canonical	3	360	junction_1	74	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGTCTTTCAGTGGA	NA	False	NA	12	True	AATAAA	-14	NA	144112845	144122434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144112993_144113834_144114405_144118234
ES.20224.6	chr2	+	1867	5	NNC	ENSMUSG00000027424.12	novel	2308	5	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	220.462440111689	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTAGTCTTTCAGTG	NA	False	NA	10	True	AATAAA	-12	NA	144112850	144122432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144112935_144114003_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.7	chr2	+	2786	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	56	-2	15	2	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGTATTTATAGGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	144112875	144123149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20224.8	chr2	+	4500	4	NIC	ENSMUSG00000027424.12	novel	2840	5	NA	NA	47	-3	intron_retention	FALSE	canonical	3	360	junction_1	72.2403396079134	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTAGTCTTTCAGTGG	NA	False	NA	11	True	AATAAA	-13	NA	144112907	144122433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144112993_144113834_144114405_144118234_144121047_144121400
ES.20224.9	chr2	+	2309	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	50	0	50	0	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112910	144122436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ES.20225.1	chr2	-	3149	10	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_5	441.149536529561	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112730	144092042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.11	chr2	-	2464	15	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	480.319982630627	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTCTGGTTTCTGACT	NA	False	NA	NA	False	AAGAAA	-11	NA	144112713	144092047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095022_144095093_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.14	chr2	-	2378	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	63	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	498.584825684022	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144112429	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095022_144095051_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.15	chr2	-	3824	11	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	1195	junction_8	120.981858144104	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144112832	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.16	chr2	-	4432	11	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	1195	junction_8	115.908800356142	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144112706	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.18	chr2	-	2458	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-46	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	371.254741168698	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144112750	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099144_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.2	chr2	-	2575	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	-63	0	-63	0	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112889	144092042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.20	chr2	-	1918	9	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-1250	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	471.824765538012	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144103932	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839
ES.20225.21	chr2	-	2588	15	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	49	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	475.51864273847	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCTGGTTTCTGAC	NA	False	NA	NA	False	AAGAAA	-10	NA	144112777	144092048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144111381_144111513_144112296_144112380_144112620
ES.20225.22	chr2	-	2118	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	-12	406	-12	-406	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGTGCTTTTGTAGAAA	NA	False	NA	-17	True	AATAAA	-19	NA	144112838	144092448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.23	chr2	-	2068	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-8	-407	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	375.090111461201	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTGCTTTTGTAGAA	NA	False	NA	-18	True	AATAAA	-18	NA	144112834	144092449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103900_144112296_144112380_144112620
ES.20225.25	chr2	-	2373	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-7	-408	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	375.618700658026	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAGTGCTTTTGTAGA	NA	False	NA	-19	True	AATAAA	-17	NA	144112711	144092450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101483_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.26	chr2	-	3694	8	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	1658	-408	intron_retention	FALSE	canonical	3	1211	junction_2	61.6921256510662	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAGTGCTTTTGTAGA	NA	False	NA	-19	True	AATAAA	-17	NA	144101024	144092450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144099914_144100976
ES.20225.27	chr2	-	6004	12	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	4359	408	4359	-408	3prime_fragment	FALSE	canonical	3	1195	junction_10	122.338914157987	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAGTGCTTTTGTAGA	NA	False	NA	-19	True	AATAAA	-17	NA	144108133	144092450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839
ES.20225.29	chr2	-	3420	11	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-5	-409	intron_retention	FALSE	canonical	3	1195	junction_8	120.981858144104	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGAGTGCTTTTGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	144112831	144092451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.3	chr2	-	3525	12	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-98	0	intron_retention	FALSE	canonical	3	1195	junction_9	117.178820752975	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112924	144092042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.30	chr2	-	2664	13	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	-409	intron_retention	FALSE	canonical	3	1124	junction_12	126.337730794178	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGAGTGCTTTTGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	144112713	144092451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.34	chr2	-	2008	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	375.485011795198	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144112713	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112400_144112620
ES.20225.35	chr2	-	2743	13	NNC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	4357	-411	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_12	366.130327433643	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144108135	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144107204
ES.20225.36	chr2	-	1212	7	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	1681	-411	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	508.938655984742	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144101001	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976
ES.20225.38	chr2	-	2421	13	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-45	-411	intron_retention	FALSE	canonical	3	1124	junction_12	130.94599713877	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144112749	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.39	chr2	-	3598	13	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	49	-411	intron_retention	FALSE	canonical	3	1124	junction_12	125.985752060391	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144112777	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.4	chr2	-	3088	12	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-60	0	intron_retention	FALSE	canonical	3	1195	junction_9	120.019557634896	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112764	144092042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.41	chr2	-	2237	15	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-5	-411	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	475.51864273847	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATATGGAGTGCTTTTGT	NA	False	NA	-22	True	AATAAA	-14	NA	144112831	144092453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144111381_144111513_144112296_144112380_144112620
ES.20225.43	chr2	-	2927	12	NNC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-29	-412	intron_retention	FALSE	canonical	2	16	junction_3	397.223171446335	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATATGGAGTGCTTTTG	NA	False	NA	-23	True	AATAAA	-13	NA	144112733	144092454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096640_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.45	chr2	-	1631	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	-45	926	-45	15	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGTTGGTTTAAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	144112871	144092968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.46	chr2	-	2501	12	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-8	15	intron_retention	TRUE	non_canonical	0	0	junction_10	379.898159472046	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGTTGGTTTAAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	144112834	144092968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103847_144103945_144112296
ES.20225.47	chr2	-	1512	13	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-61	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	592.914570153239	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGTTGGTTTAAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	144112765	144092968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095584_144095742_144096645_144096746_144097239_144097336_144097418_144097522_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.48	chr2	-	1589	15	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	482.314747137305	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGTTGGTTTAAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	144112713	144092968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144101362_144101479_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.49	chr2	-	3058	13	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-48	15	intron_retention	FALSE	canonical	3	1124	junction_12	125.985752060391	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGTTGGTTTAAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	144112752	144092968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.52	chr2	-	1490	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-7	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	375.485011795198	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATGTTGGTTTAAAAA	NA	False	NA	-3	True	AATAAA	-29	NA	144112711	144092969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112400_144112620
ES.20225.54	chr2	-	2876	11	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	21	14	intron_retention	FALSE	canonical	3	1195	junction_8	120.981858144104	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATGTTGGTTTAAAAA	NA	False	NA	-3	True	AATAAA	-29	NA	144112805	144092969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.55	chr2	-	4450	9	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	25	14	intron_retention	FALSE	canonical	3	1195	junction_6	132.807191070363	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATGTTGGTTTAAAAA	NA	False	NA	-3	True	AATAAA	-29	NA	144112801	144092969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.56	chr2	-	2226	13	NNC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	4357	13	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_12	366.130327433643	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCATGTTGGTTTAAAA	NA	False	NA	-4	True	AATAAA	-28	NA	144108135	144092970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144107204
ES.20225.57	chr2	-	1329	12	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	406.833285651567	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCATGTTGGTTTAAAA	NA	False	NA	-4	True	AATAAA	-28	NA	144112713	144092970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144097444_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.58	chr2	-	1536	15	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	480.319982630627	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTAACCATGTTGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	144112713	144092975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095022_144095093_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.59	chr2	-	2579	10	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-42	8	intron_retention	TRUE	non_canonical	0	0	junction_5	572.082571956009	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTAACCATGTTGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	144112746	144092975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096640_144096733_144096822_144096991_144098805_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.6	chr2	-	4183	12	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	1211	junction_2	112.942024182526	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTTCTGACTGT	NA	False	NA	NA	False	AAGAAA	-13	NA	144112713	144092045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144102756_144103839_144103945_144112296
ES.20225.60	chr2	-	4682	10	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-2849	8	intron_retention	FALSE	canonical	3	1195	junction_8	122.178477019946	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTAACCATGTTGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	144105531	144092975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839
ES.20225.63	chr2	-	2102	12	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-8	7	intron_retention	FALSE	canonical	3	1195	junction_9	120.019557634896	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTTAACCATGTTGGT	NA	False	NA	-10	True	AATAAA	-22	NA	144112712	144092976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.64	chr2	-	1227	11	NIC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-58	7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	425.136872077687	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTTAACCATGTTGGT	NA	False	NA	-10	True	AATAAA	-22	NA	144112762	144092976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.65	chr2	-	2424	12	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-51	4	intron_retention	FALSE	canonical	2	16	junction_3	397.223171446335	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAACACTTAACCATGTT	NA	False	NA	-13	True	AATAAA	-19	NA	144112755	144092979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096640_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ES.20225.66	chr2	-	1443	14	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	376.594362158367	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTTAACACTTAACC	NA	False	NA	-18	True	AATAAA	-14	NA	144112713	144092984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097432_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ES.20225.67	chr2	-	3639	11	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	1211	junction_2	114.725585638078	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATCTTAACACTTAAC	NA	False	NA	-19	True	AATAAA	-13	NA	144112712	144092985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144102756_144103839_144103945_144112296
ES.20225.68	chr2	-	1137	12	NNC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	513.543724550104	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATCTTAACACTTAAC	NA	False	NA	-19	True	AATAAA	-13	NA	144102689	144092985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095022_144095051_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644
ES.20225.69	chr2	-	2260	1	FSM	ENSMUSG00000077714.3	ENSMUST00000104526.3	238	1	140	-2162	140	2162	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTACAACTGATACTT	NA	False	NA	NA	False	NA	NA	NA	144107996	144105736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_144105700_144108000
ES.20225.70	chr2	-	3925	1	Genic_Genomic	ENSMUSG00000027423.16	novel	NA	NA	NA	NA	-15	2457	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGTGGATTAATGAT	NA	False	NA	NA	False	NA	NA	NA	144112841	144108916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_144108900_144112800
ES.20225.71	chr2	-	3548	2	ISM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	117	16878	-5	2453	5prime_fragment	FALSE	canonical	3	1124	junction_1	0	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGTGGATTAA	NA	False	NA	NA	False	NA	NA	NA	144112709	144108920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_144112380_144112620
ES.20225.8	chr2	-	1582	1	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	968	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTCTGGTTTCTGACT	NA	False	NA	NA	False	AAGAAA	-11	NA	144093629	144092047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144092000_144093600
ES.20225.9	chr2	-	2678	16	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	-46	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	599.239903729902	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTCTGGTTTCTGACT	NA	False	NA	NA	False	AAGAAA	-11	NA	144112750	144092047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144101362_144101479_144102644_144102756_144103839_144103945_144111381_144111513_144112296_144112380_144112620
ES.20226.1	chr2	-	1572	1	Antisense	novelGene_ENSMUSG00000027424.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCCCAAGTAAGATTCA	NA	False	NA	NA	False	AAAAAG	-7	NA	144115105	144113533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_144113500_144115100
ES.20227.1	chr2	-	205	1	Intergenic	novelGene_16723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGGTAGATTATGCAT	NA	False	NA	NA	False	NA	NA	NA	144120611	144120406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144120400_144120600
ES.20228.1	chr2	-	1798	3	ISM	ENSMUSG00000037279.14	ENSMUST00000103171.10	1547	4	-74	3	-74	-3	intron_retention	FALSE	canonical	3	14	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTCTTTTTTAAAAT	NA	False	NA	-15	True	AATAAA	-16	NA	144173689	144147097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_144147840_144159630_144159821_144172823
ES.20229.1	chr2	-	203	1	Intergenic	novelGene_16724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAATGGGCTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	144205308	144205105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144205100_144205300
ES.2023.1	chr1	-	209	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAACCATGATTAACA	7570	False	NA	NA	False	NA	NA	NA	179510466	179510257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179510300_179510500
ES.20230.1	chr2	+	4102	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-112	0	intron_retention	FALSE	canonical	1	11	junction_2	132.928800926295	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210790	144249596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.11	chr2	+	3193	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-13	-20	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	116.355113324229	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210889	144249575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
ES.20230.12	chr2	+	5365	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-13	-20	intron_retention	FALSE	canonical	1	121	junction_9	84.9349787618973	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210889	144249575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144244491_144245918_144246110_144248542
ES.20230.13	chr2	+	3726	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-12	-20	intron_retention	FALSE	canonical	1	26	junction_8	120.973592159611	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210890	144249575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244380_144244491_144245918_144246110_144248542
ES.20230.14	chr2	+	3713	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-10	-31	intron_retention	FALSE	non_canonical	0	0	junction_8	126.897951126092	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTCACAGCCAGGGCT	NA	False	NA	8	True	AATAAA	-14	NA	144210892	144249564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242656_144244293_144244491_144245918_144246110_144248542
ES.20230.15	chr2	+	6591	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-10	-2780	-10	2780	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAAACGAAAA	NA	False	NA	NA	False	NA	NA	NA	144210892	144252376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.16	chr2	+	6223	10	ISM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-10	21	-10	-20	intron_retention	FALSE	canonical	3	306	junction_6	44.0978149566463	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210892	144249575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918
ES.20230.17	chr2	+	3602	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-25	intron_retention	FALSE	canonical	0	0	junction_4	133.543168218287	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGCCAGGGCTGCAGCC	NA	False	NA	14	True	AATAAA	-20	NA	144210893	144249570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.18	chr2	+	7115	3	ISM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-9	25566	-9	-7147	intron_retention	FALSE	canonical	3	328	junction_2	65.5	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATACGCCTTTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	144210893	144224030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144211078_144215110_144215776_144217764
ES.20230.19	chr2	+	3896	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-23	intron_retention	FALSE	non_canonical	0	0	junction_5	149.712617265864	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210893	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222670_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.2	chr2	+	3378	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	-80	1	-64	0	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCACTCAGCTTGTCTT	NA	False	NA	39	True	AATAAA	-45	NA	144210838	144249595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.20	chr2	+	3741	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-5	intron_retention	FALSE	canonical	1	1	junction_9	145.145616537324	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCATTTGCACTCAGCTT	NA	False	NA	34	True	AATAAA	-40	NA	144210893	144249590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144246161_144246290_144248542
ES.20230.21	chr2	+	4597	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	909	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGTGAGTGTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	144210893	144250505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.22	chr2	+	3850	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-17	intron_retention	FALSE	canonical	0	0	junction_5	147.79967456545	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGCAGCCTAGTCATT	NA	False	NA	22	True	AATAAA	-28	NA	144210893	144249578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144233149_144233208_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.23	chr2	+	3671	10	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-9	-29	intron_retention	FALSE	non_canonical	0	0	junction_7	172.215268676828	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCACAGCCAGGGCTGC	NA	False	NA	10	True	AATAAA	-16	NA	144210893	144249566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244302_144244491_144245918_144246111_144248542
ES.20230.28	chr2	+	3131	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-2	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	144.120702397345	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	17	True	AATAAA	-23	NA	144210900	144249573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217813_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
ES.20230.29	chr2	+	3496	9	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-2	-23	intron_retention	FALSE	canonical	0	0	junction_3	141.046091757269	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210900	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.3	chr2	+	3729	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-56	-5	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCATTTGCACTCAGCTT	NA	False	NA	34	True	AATAAA	-40	NA	144210846	144249590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.30	chr2	+	2796	9	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-1	-31	intron_retention	FALSE	non_canonical	0	0	junction_6	162.966062417916	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTCACAGCCAGGGCT	NA	False	NA	8	True	AATAAA	-14	NA	144210906	144249564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144242605_144242743_144244303_144244491_144245918_144246110_144248542
ES.20230.31	chr2	+	3311	11	NIC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	-1	-20	intron_retention	FALSE	canonical	1	28	junction_5	136.341079649532	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCTGCAGCCTAGTC	NA	False	NA	19	True	AATAAA	-25	NA	144210906	144249575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.32	chr2	+	3729	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	-21	intron_retention	FALSE	canonical	1	26	junction_8	144.418177526238	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144210907	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244380_144244491_144245918_144246110_144248542
ES.20230.33	chr2	+	2920	8	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	149.87178193512	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCACTCAGCTTGTCTT	NA	False	NA	39	True	AATAAA	-45	NA	144210908	144249595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215624_144235522_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.34	chr2	+	3385	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	2	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.610407441791	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGCCTGTGCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	144210909	144249140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144244740_144244788_144245918_144246110_144248542
ES.20230.36	chr2	+	6217	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	2	-21	intron_retention	FALSE	canonical	0	0	junction_1	135.145101084381	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144210909	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144213334_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.37	chr2	+	3355	13	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-5	-23	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	142.816583031835	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210913	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
ES.20230.38	chr2	+	3866	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-5	-29	intron_retention	FALSE	canonical	1	1	junction_1	134.972234671548	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCACAGCCAGGGCTGC	NA	False	NA	10	True	AATAAA	-16	NA	144210913	144249566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144213607_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.39	chr2	+	3175	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-1	-31	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	139.496141716246	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTCACAGCCAGGGCT	NA	False	NA	8	True	AATAAA	-14	NA	144210917	144249564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
ES.20230.4	chr2	+	996	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	-69	-234	-69	234	multi-exon	FALSE	canonical	3	459	junction_1	0	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTATTATTATTAGTCT	NA	False	NA	21	True	AATAAA	-22	NA	144210846	144215875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110
ES.20230.41	chr2	+	3794	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	2	-21	intron_retention	FALSE	non_canonical	0	0	junction_8	148.89288095809	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144210920	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244302_144244491_144245918_144246110_144248542
ES.20230.42	chr2	+	1103	3	FSM	ENSMUSG00000027425.19	ENSMUST00000171261.2	562	3	14	-555	3	555	multi-exon	FALSE	canonical	3	11	junction_2	1	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCATCATTATTATTA	NA	False	NA	14	True	AATAAA	-15	NA	144210921	144215868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144213524_144213714_144215110
ES.20230.43	chr2	+	5091	7	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	3	-21	intron_retention	FALSE	canonical	2	3	junction_4	174.494189651754	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144210921	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144242605_144242743_144244314_144244491_144245918
ES.20230.44	chr2	+	3820	12	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	3	-25	intron_retention	FALSE	canonical	0	0	junction_7	144.512403311078	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGCCAGGGCTGCAGCC	NA	False	NA	14	True	AATAAA	-20	NA	144210921	144249570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144240912_144240977_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.47	chr2	+	3439	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	20	342	4	-341	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGCTGCTTTACCTGAT	NA	False	NA	NA	False	NA	NA	NA	144210922	144249254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.49	chr2	+	3595	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	5	-23	intron_retention	FALSE	canonical	0	0	junction_4	133.543168218287	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210923	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.5	chr2	+	3860	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-54	-5	-54	5	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCTTGTCTTTAATTA	NA	False	NA	45	True	NA	NA	NA	144210848	144249601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.51	chr2	+	4923	9	NNC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	6	-31	intron_retention	FALSE	canonical	1	4	junction_2	140.171713890499	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTCACAGCCAGGGCT	NA	False	NA	8	True	AATAAA	-14	NA	144210924	144249564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215290_144217769_144217884_144222626_144222749_144231094_144231277_144235223_144236299_144242605_144244491_144245918_144246110_144248542
ES.20230.52	chr2	+	5096	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	14	-1811	14	1811	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGTGTCTATATACA	NA	False	NA	NA	False	AATAAA	-15	NA	144210932	144251407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.54	chr2	+	3376	12	NNC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_5	155.577994577299	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCACTCAGCTTGTCTT	NA	False	NA	39	True	AATAAA	-45	NA	144210932	144249595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144233115_144233208_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.55	chr2	+	4691	10	NIC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	14	-21	intron_retention	FALSE	canonical	1	81	junction_2	113.822907716275	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144210932	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144246110_144248542
ES.20230.56	chr2	+	5500	10	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	14	-22	intron_retention	FALSE	canonical	2	4	junction_9	117.966829403465	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGGGCTGCAGCCTAG	NA	False	NA	17	True	AATAAA	-23	NA	144210932	144249573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144244491_144245918_144246290_144248542
ES.20230.57	chr2	+	4015	4	ISM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	30	23884	14	-5465	5prime_fragment	FALSE	canonical	3	326	junction_3	62.230753383409	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAACTCAACTAT	NA	False	NA	NA	False	NA	NA	NA	144210932	144225712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626
ES.20230.58	chr2	+	3663	10	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	14	-25	intron_retention	FALSE	non_canonical	0	0	junction_2	173.13286127804	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGCCAGGGCTGCAGCC	NA	False	NA	14	True	AATAAA	-20	NA	144210932	144249570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215804_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244302_144244491_144245918_144246110_144248542
ES.20230.6	chr2	+	3857	11	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-35	0	intron_retention	FALSE	canonical	1	28	junction_5	120.788906775415	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210867	144249596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.60	chr2	+	3900	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	41	-23	intron_retention	FALSE	canonical	2	4	junction_10	112.129790867548	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210959	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246290_144248542
ES.20230.61	chr2	+	3118	10	NIC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	50	-29	intron_retention	FALSE	canonical	1	20	junction_3	159.74424002831	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCACAGCCAGGGCTGC	NA	False	NA	10	True	AATAAA	-16	NA	144210968	144249566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144211078_144215110_144215290_144217764_144217884_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.62	chr2	+	3605	10	ISM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	4205	24	-615	-23	3prime_fragment	FALSE	canonical	1	121	junction_9	71.4092707609963	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144215107	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.63	chr2	+	2965	9	NIC	ENSMUSG00000027425.19	novel	3299	11	NA	NA	-581	-21	intron_retention	FALSE	canonical	1	20	junction_2	134.584313721919	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144215141	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144215290_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.65	chr2	+	4156	2	NNC	ENSMUSG00000027425.19	novel	478	3	NA	NA	-683	-4671	intron_retention	FALSE	non_canonical	0	0	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144216623	144226506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144218384_144224110
ES.20230.66	chr2	+	3282	10	NIC	ENSMUSG00000027425.19	novel	504	4	NA	NA	-69	-23	intron_retention	FALSE	canonical	1	1	junction_1	120.773842315521	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144217237	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144217583_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.67	chr2	+	3139	10	NNC	ENSMUSG00000027425.19	novel	504	4	NA	NA	-65	-21	intron_retention	FALSE	canonical	1	6	junction_1	119.508354994872	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144217241	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144217442_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.68	chr2	+	3143	10	NNC	ENSMUSG00000027425.19	novel	504	4	NA	NA	-59	-32	intron_retention	FALSE	canonical	1	6	junction_1	140.715192612947	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACCTCACAGCCAGGGC	NA	False	NA	7	True	AATAAA	-13	NA	144217247	144249563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144217442_144217764_144217884_144222626_144222749_144231094_144231277_144235202_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.69	chr2	+	3229	2	ISM	ENSMUSG00000027425.19	ENSMUST00000130654.8	504	4	-63	17013	-63	-5497	5prime_fragment	FALSE	canonical	3	326	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144217708	144225680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144217884_144222626
ES.20230.7	chr2	+	3835	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-30	-23	intron_retention	FALSE	canonical	0	0	junction_2	127.166819571774	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144210872	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215804_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.70	chr2	+	5752	8	ISM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	8776	22	1923	-21	3prime_fragment	FALSE	canonical	1	121	junction_7	80.5369733826188	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGCTGCAGCCTAGT	NA	False	NA	18	True	AATAAA	-24	NA	144219694	144249574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.71	chr2	+	5665	1	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	3098	-4643	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGAATTGCATGGGC	NA	False	NA	NA	False	NA	NA	NA	144220869	144226534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144220900_144226500
ES.20230.72	chr2	+	3440	1	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	4494	-5472	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAGAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	144222265	144225705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144222300_144225700
ES.20230.73	chr2	+	157	1	Intergenic	novelGene_16725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	144233663	144233820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144233700_144233800
ES.20230.74	chr2	+	3544	4	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	4988	-23	intron_retention	FALSE	canonical	2	4	junction_3	170.276246141381	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGGGCTGCAGCCTA	NA	False	NA	16	True	AATAAA	-22	NA	144235896	144249572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144236299_144242605_144242743_144244314_144246290_144248542
ES.20230.75	chr2	+	136	1	Intergenic	novelGene_16726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACCAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	144242093	144242229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144242100_144242200
ES.20230.8	chr2	+	5643	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	-29	-1813	-29	1813	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTGTCTATATACACA	NA	False	NA	NA	False	AATAAA	-17	NA	144210873	144251409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ES.20230.9	chr2	+	3827	11	NNC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	-18	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	126.897951126092	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTGCACTCAGCTTGT	NA	False	NA	36	True	AATAAA	-42	NA	144210884	144249592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244302_144244491_144245918_144246110_144248542
ES.20231.1	chr2	-	3165	1	Antisense	novelGene_ENSMUSG00000098387.3_AS_novelGene_ENSMUSG00000027425.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCTGAGTGATCATC	NA	False	NA	NA	False	NA	NA	NA	144211053	144207888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_144207900_144211100
ES.20232.1	chr2	-	2071	1	Antisense	novelGene_ENSMUSG00000027425.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144231546	144229475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_144229500_144231500
ES.20233.1	chr2	-	3322	3	Intergenic	novelGene_16727	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATTTTATGTGTATGG	6234	False	NA	NA	False	TTTAAA	-3	NA	144259968	144255875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144257752_144257931_144259249_144259839
ES.20234.1	chr2	+	909	3	FSM	ENSMUSG00000083674.4	ENSMUST00000124788.2	1079	3	50	120	50	-120	multi-exon	FALSE	canonical	1	3	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	144301249	144309594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144301321_144306398_144306495_144308852
ES.20234.2	chr2	+	1008	3	FSM	ENSMUSG00000083674.4	ENSMUST00000124788.2	1079	3	66	5	66	-5	multi-exon	FALSE	canonical	1	3	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTCAAGTGTACGTT	NA	False	NA	NA	False	AATAAA	-12	NA	144301265	144309709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144301321_144306398_144306495_144308852
ES.20234.3	chr2	+	4851	3	NNC	ENSMUSG00000083674.4	novel	424	3	NA	NA	1224	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCACTCAAGTGTACG	NA	False	NA	NA	False	AATAAA	-10	NA	144302423	144309707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144304572_144304646_144306495_144308852
ES.20235.1	chr2	-	2212	9	ISM	ENSMUSG00000037259.16	ENSMUST00000163701.2	6834	21	38630	3130	37880	-3130	3prime_fragment	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCAGAACGGCTATGT	1413	False	NA	NA	False	ATTAAA	-15	NA	144330688	144315606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_144317010_144317992_144318068_144320934_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540
ES.20236.1	chr2	-	179	1	Intergenic	novelGene_16728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAGAGAGAGA	6584	False	NA	NA	False	NA	NA	NA	144359099	144358920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144358900_144359100
ES.20237.1	chr2	+	4633	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	-227	-3	-227	3	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCTGGTATTATTCA	370	False	NA	11	True	GATAAA	-27	NA	144369410	144383918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.2	chr2	+	3645	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	24	734	0	-734	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGGGTTTTGGTGGTA	621	False	NA	NA	False	AATAAA	-9	NA	144369661	144383181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.3	chr2	+	6635	7	NIC	ENSMUSG00000027427.14	novel	4403	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	49	junction_3	4.74926894959167	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCTGTTTCTGGTAT	627	False	NA	5	True	GATAAA	-21	NA	144369667	144383912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144369846_144370622_144370741_144374273_144375146_144376218_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.4	chr2	+	2381	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	31	1991	1	1110	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTCTTTTTTCCATT	628	False	NA	3	True	NA	NA	NA	144369668	144381924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.5	chr2	+	3327	10	NNC	ENSMUSG00000027427.14	novel	4403	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	18.1665817191354	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTCTGGTATTATT	628	False	NA	9	True	GATAAA	-25	NA	144369668	144383916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531_144381350_144382395
ES.20237.6	chr2	+	1255	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	34	3114	4	-13	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTCAGTAAGTAAAATAC	631	False	NA	NA	False	AATAAA	-19	NA	144369671	144380801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.7	chr2	+	3404	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	34	965	4	-965	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGGCCTCTAAAATCAT	631	False	NA	NA	False	AATAAA	-25	NA	144369671	144382950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ES.20237.8	chr2	+	3458	4	ISM	ENSMUSG00000027427.14	ENSMUST00000143292.8	835	7	2854	-2104	-727	-1097	3prime_fragment	FALSE	canonical	3	55	junction_3	1.24721912892465	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTATTTTTTACTCTGA	1777	False	NA	NA	False	AATAAA	-23	NA	144377133	144382818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144378005_144378202_144378311_144379085_144379278_144380531
ES.20238.1	chr2	+	3101	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-310	3	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTCTCATTTTGTG	NA	False	NA	NA	False	AATAAA	-40	NA	144397838	144432672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.11	chr2	+	2569	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	6	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	144.356246008868	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398181	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144398245_144401126_144401189_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.12	chr2	+	2768	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	6	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.953622201695	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398181	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144398245_144401126_144401388_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.13	chr2	+	2540	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	7	232	7	-232	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGTCTTCAGGTTGTAA	NA	False	NA	NA	False	AATAAA	-41	NA	144398182	144432437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.15	chr2	+	3064	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	11	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	139.039781867738	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTAATGCAGATTTTG	NA	False	NA	NA	False	AATAAA	-28	NA	144398186	144432660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398568_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.16	chr2	+	4857	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	11	-3	intron_retention	FALSE	canonical	3	371	junction_1	62.234324219928	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCAGATTTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-34	NA	144398186	144432666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.18	chr2	+	2530	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	142.562754213325	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144398187	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398263_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.19	chr2	+	5240	18	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	12	-10	intron_retention	FALSE	canonical	1	3	junction_1	144.190689773303	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATACTAATGCAGATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	144398187	144432659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398263_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421
ES.20238.2	chr2	+	2783	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	-6	2	-6	-2	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144398169	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.20	chr2	+	5913	18	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	154	junction_1	111.423472892469	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGCAGATTTTGTCTC	NA	False	NA	NA	False	AATAAA	-32	NA	144398190	144432664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144424018_144425610_144425689_144427517_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.21	chr2	+	2613	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-9	-13	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	140.778760044896	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398191	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144398245_144401126_144401243_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.23	chr2	+	5299	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	154	junction_1	109.961553326045	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144398193	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.24	chr2	+	5441	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	-13	intron_retention	FALSE	canonical	3	371	junction_1	63.2859471850672	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398200	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421
ES.20238.25	chr2	+	2688	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	138.399678157601	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144398202	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144398245_144401170_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.27	chr2	+	2633	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	3	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	146.574518611431	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398203	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428785_144428942_144429421_144429488_144432205
ES.20238.28	chr2	+	2706	19	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	2872	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.219722415905	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144401125	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144401388_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.3	chr2	+	4717	18	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-4	-13	intron_retention	FALSE	canonical	1	1	junction_5	150.049749535413	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398171	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144408920_144409020_144409107_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.30	chr2	+	2691	19	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	2950	2	2872	-2	3prime_fragment	FALSE	canonical	3	530	junction_8	42.0262998197939	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144401125	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.31	chr2	+	205	1	Intergenic	novelGene_16731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACTGCACCACCAT	NA	False	NA	NA	False	NA	NA	NA	144402798	144403003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144402800_144403000
ES.20238.32	chr2	+	6637	13	NIC	ENSMUSG00000027429.17	novel	2417	17	NA	NA	1263	-13	intron_retention	FALSE	canonical	3	530	junction_5	24.8036735630475	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144408081	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144428942_144429421
ES.20238.33	chr2	+	1685	12	ISM	ENSMUSG00000027429.17	ENSMUST00000128210.2	2417	17	4199	2	4199	-2	3prime_fragment	FALSE	canonical	3	530	junction_1	46.1409984237141	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144411017	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.34	chr2	+	2593	1	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-5892	5796	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCCATTGATCTTATTA	NA	False	NA	NA	False	AAAAAG	-10	NA	144413150	144415743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144413200_144415700
ES.20238.35	chr2	+	1434	10	ISM	ENSMUSG00000027429.17	ENSMUST00000128210.2	2417	17	9766	13	-2458	-13	3prime_fragment	FALSE	canonical	3	535	junction_1	43.2000800182158	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144416584	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.36	chr2	+	3308	1	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	6969	-3350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAAAAATAA	NA	False	NA	NA	False	GATAAA	-16	NA	144426011	144429319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144426000_144429300
ES.20238.4	chr2	+	5303	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	371	junction_1	66.7609749612584	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGATTTTGTCTCATT	NA	False	NA	NA	False	AATAAA	-35	NA	144398171	144432667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.6	chr2	+	2739	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	132.014898848598	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	144398173	144432656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144398245_144401137_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ES.20238.9	chr2	+	3480	18	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	2	-9	intron_retention	FALSE	canonical	3	371	junction_1	67.0697101586196	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACTAATGCAGATTTTG	NA	False	NA	NA	False	AATAAA	-28	NA	144398177	144432660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428942_144429421_144429488_144432205
ES.20239.1	chr2	+	167	1	Intergenic	novelGene_16732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGCAAGCGGCCGA	NA	False	NA	NA	False	NA	NA	NA	144435048	144435215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144435000_144435200
ES.20239.2	chr2	+	282	1	Intergenic	novelGene_16733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAACAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	144435048	144435330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144435000_144435300
ES.2024.1	chr1	+	177	1	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	179528644	179528821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179528600_179528800
ES.20240.1	chr2	+	490	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	-17	-2	-17	2	multi-exon	FALSE	canonical	3	228	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGTCTTCTTGAAGGT	NA	False	NA	NA	False	NA	NA	NA	144435956	144437288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144436126_144436967
ES.20240.2	chr2	+	1291	1	NIC	ENSMUSG00000074754.5	novel	471	2	NA	NA	13	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGCAACCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	144435986	144437277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144436000_144437300
ES.20241.1	chr2	+	1163	5	NIC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	55	-41	combination_of_known_splicesites	TRUE	canonical	3	12	junction_1	128.50753868937	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTACTTTATTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	144441871	144610637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_144442012_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ES.20241.2	chr2	+	1291	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	61	-2	61	2	multi-exon	FALSE	canonical	3	290	junction_5	10.373041983912	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTCTGTAGAAATGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	144441877	144610680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ES.20241.3	chr2	+	1026	6	NNC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	98	24420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	126.030155121701	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGTTTGTATTTGA	NA	False	NA	NA	False	NA	NA	NA	144441914	144635098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144634776
ES.20241.4	chr2	+	3977	6	NNC	ENSMUSG00000027430.13	novel	1350	6	NA	NA	100	27373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	126.030155121701	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTATAATGTATTT	NA	False	NA	NA	False	ATTAAA	-9	NA	144441916	144638051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144634776
ES.20241.5	chr2	+	5156	1	Intergenic	novelGene_16734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144491192	144496348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144491200_144496300
ES.20241.6	chr2	+	2325	2	Intergenic	novelGene_16735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATCATTTACTTAC	NA	False	NA	NA	False	NA	NA	NA	144621716	144624099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_144621877_144621934
ES.20242.1	chr2	-	967	6	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	39	12096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.505613265767	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCACATCTATCT	NA	False	NA	NA	False	NA	NA	NA	144392750	144372088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144372580_144379441_144379532_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ES.20242.10	chr2	-	3604	5	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	119.165850813058	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGACTGCTGTGGT	NA	False	NA	-11	True	AATAAA	-18	NA	144392743	144384186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391155_144391205
ES.20242.11	chr2	-	2070	4	NIC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	130.599472518928	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGACTGCTGTGGT	NA	False	NA	-11	True	AATAAA	-18	NA	144392734	144384186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_144385930_144386293_144386380_144389913_144390020_144392599
ES.20242.12	chr2	-	1022	2	Intergenic	novelGene_16729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144462767	144395405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144395581_144461920
ES.20242.13	chr2	-	606	1	Intergenic	novelGene_16730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	144398069	144397463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_144397500_144398100
ES.20242.3	chr2	-	7464	3	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	7817	8347	intron_retention	FALSE	non_canonical	0	0	junction_1	0	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACCACACAAACCACGA	NA	False	NA	NA	False	TATAAA	-41	NA	144384893	144375837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144377334_144377670_144379277_144380531
ES.20242.4	chr2	-	8699	2	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	7817	8327	intron_retention	FALSE	canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-21	NA	144384893	144375857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144377334_144377670
ES.20242.5	chr2	-	4384	1	Genic_Genomic	ENSMUSG00000027428.10	novel	NA	NA	NA	NA	7817	3675	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATTCAAATTCAAGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	144384893	144380509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_144380500_144384900
ES.20242.6	chr2	-	177	1	Antisense	novelGene_ENSMUSG00000027427.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAGACAATCCACGAG	NA	False	NA	NA	False	NA	NA	NA	144381800	144381623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_144381600_144381800
ES.20242.7	chr2	-	2155	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	22	-7	22	7	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGTGGTGCCAAAGAT	NA	False	NA	-2	True	AATAAA	-27	NA	144392767	144384177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ES.20242.8	chr2	-	6941	4	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	166	0	intron_retention	FALSE	non_canonical	0	0	junction_3	122.159276720554	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392544	144384184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144385930_144386293_144390020_144391023_144391155_144391205
ES.20242.9	chr2	-	2437	5	NNC	ENSMUSG00000027428.10	novel	2170	5	NA	NA	-5253	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.165850813058	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGACTGCTGTGGTG	NA	False	NA	-10	True	AATAAA	-19	NA	144398042	144384185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144397584
ES.20243.1	chr2	-	180	1	Intergenic	novelGene_16736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAATCGGA	NA	False	NA	NA	False	NA	NA	NA	145028019	145027839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_145027800_145028000
ES.20244.1	chr2	+	175	1	Intergenic	novelGene_16737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	145410126	145410301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_145410100_145410300
ES.20245.1	chr2	+	4903	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	-49	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	4.12238800214593	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517237	145729535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145517505_145554374_145554499_145579302_145579375_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.10	chr2	+	5190	16	NNC	ENSMUSG00000001768.17	novel	334	3	NA	NA	149	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.71121593174793	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517435	145729535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145554374_145554499_145626547_145626857_145628241_145628335_145664184_145664286_145664529_145664682_145680997_145681094_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.11	chr2	+	2333	11	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	156	12301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.3692104549907	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGGGTCACTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	145517442	145699308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145554374_145554499_145579302_145579375_145582361_145582436_145615724_145615864_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145698018
ES.20245.12	chr2	+	968	5	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	193	-1346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATAGGCAATGCTTATC	NA	False	NA	NA	False	AATAAA	-19	NA	145517479	145555563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145519003_145519100_145522743_145522897_145554374_145554499_145554993
ES.20245.13	chr2	+	4352	1	Intergenic	novelGene_16738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145519661	145524013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_145519700_145524000
ES.20245.14	chr2	+	1314	1	Intergenic	novelGene_16739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAAGATGCCTT	NA	False	NA	NA	False	NA	NA	NA	145539009	145540323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_145539000_145540300
ES.20245.15	chr2	+	4480	12	FSM	ENSMUSG00000001768.17	ENSMUST00000110005.8	4641	12	158	3	22	-3	multi-exon	FALSE	canonical	1	2	junction_1	3.2702010452009	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCAGTTGTCTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	145628057	145729533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_145628100_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.2	chr2	+	3876	14	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	-29	-1032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.4295938611963	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAGACGCCTCATAGA	NA	False	NA	NA	False	GATAAA	-26	NA	145517257	145728504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145554374_145554499_145628241_145628335_145664184_145664286_145680997_145681094_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.3	chr2	+	5163	16	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.28433840348257	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	False	NA	NA	False	AATACA	-42	NA	145517286	145729529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145519003_145519100_145554374_145554499_145615724_145615864_145628241_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.4	chr2	+	4778	13	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.53847895759369	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517290	145729535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145517505_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.5	chr2	+	4886	15	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	114	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	4.43087497693452	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	False	NA	NA	False	AATACA	-42	NA	145517400	145729529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145517505_145554374_145554499_145579302_145579375_145628241_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.6	chr2	+	4872	15	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	115	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.26961260967956	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	False	NA	NA	False	AATACA	-42	NA	145517401	145729529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145554374_145554499_145579302_145579375_145615724_145615864_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.7	chr2	+	4739	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	135	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.96433806976158	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCAGTTGTCTTTTT	NA	False	NA	NA	False	AATACA	-44	NA	145517421	145729531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145517505_145519003_145519100_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.8	chr2	+	4884	15	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	146	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.24264068711928	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGTCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	145517432	145729535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145517505_145519003_145519100_145554374_145554499_145628241_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20245.9	chr2	+	4767	14	NNC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	148	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.84615384615385	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	False	NA	NA	False	AATACA	-42	NA	145517434	145729529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145517505_145554374_145554499_145615724_145615864_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ES.20246.1	chr2	+	1154	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	-19	7	-19	-7	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACATCTGTAATCAT	NA	False	NA	24	True	TATAAA	-9	NA	145745141	145758338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ES.20246.11	chr2	+	1071	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	539.338657524194	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTAATCATCCCTGT	NA	False	NA	30	True	TATAAA	-15	NA	145745181	145758344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745283_145753616_145753684_145754312_145754449_145757453_145757600_145757723
ES.20246.12	chr2	+	4669	1	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-2474	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTGAATTTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	145745181	145749850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745200_145749800
ES.20246.13	chr2	+	564	5	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	31	671	10	20	5prime_fragment	FALSE	canonical	3	961	junction_2	127.74681992128	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAGTTTGCTATTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	145745191	145757674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453
ES.20246.14	chr2	+	997	6	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	10	-109	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_4	440.981178736689	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745191	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757458_145757600_145757723
ES.20246.15	chr2	+	1625	5	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-16	-109	intron_retention	FALSE	canonical	3	961	junction_2	190.755570036631	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745197	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745283_145750510_145750536_145753592_145754449_145757453_145757600_145757723
ES.20246.16	chr2	+	686	7	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	-11	-109	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_6	449.099623939079	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745202	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723_145757808_145758112
ES.20246.17	chr2	+	989	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	44	109	-9	-109	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745204	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ES.20246.18	chr2	+	1260	5	NNC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-5	-109	intron_retention	FALSE	non_canonical	3	24	junction_4	617.116834562143	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745208	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145745283_145753616_145754449_145757453_145757600_145757723_145757808_145758112
ES.20246.19	chr2	+	943	6	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	-1	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	498.650739496093	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTTCTGGAAGTTT	NA	False	NA	-47	True	AGTAAA	-14	NA	145745215	145758234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757486_145757600_145757723
ES.20246.2	chr2	+	4727	4	NIC	ENSMUSG00000002728.15	novel	1172	6	NA	NA	-6	-107	intron_retention	FALSE	canonical	3	980	junction_1	198.001683494527	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745154	145758238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745283_145750510_145754449_145757453_145757600_145757723
ES.20246.20	chr2	+	2215	6	NNC	ENSMUSG00000002728.15	novel	830	2	NA	NA	185	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	500.85566783256	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGTAATCATCCCTG	NA	False	NA	29	True	TATAAA	-14	NA	145745401	145758343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145746599_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ES.20246.21	chr2	+	3814	2	FSM	ENSMUSG00000002728.15	ENSMUST00000129502.2	830	2	-2402	-582	-2402	-109	multi-exon	FALSE	canonical	3	1051	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145751417	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_145754449_145757453
ES.20246.22	chr2	+	1987	1	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	2430	-109	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145756249	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145756200_145758200
ES.20246.4	chr2	+	1072	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	-5	105	-5	-105	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGAAGTTTGTTGTC	NA	False	NA	-41	True	AGTAAA	-20	NA	145745155	145758240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
ES.20246.5	chr2	+	1149	6	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	-2	-109	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	582.181621145841	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTGGAAGTTTGT	NA	False	NA	-45	True	AGTAAA	-16	NA	145745158	145758236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_145745283_145750391_145750536_145753592_145753684_145754312_145754449_145757458_145757600_145757723
ES.20246.6	chr2	+	4075	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	1	-107	intron_retention	FALSE	canonical	3	980	junction_1	180.209600188225	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745177	145758238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745283_145750510_145753684_145754312_145754449_145757453_145757600_145757723
ES.20246.9	chr2	+	482	1	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-6661	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGGTTCATTTCGTATC	NA	False	NA	NA	False	NA	NA	NA	145745181	145745663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_145745200_145745700
ES.20247.1	chr2	-	5535	1	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTCTAGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	145751333	145745798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_145745800_145751300
ES.20247.10	chr2	-	2366	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	295	767	-5	-767	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCGAGCATTTCTAGCAT	NA	False	NA	-1	True	AGTAAA	-29	NA	145776639	145760165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.11	chr2	-	2544	15	NNC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	-3	-782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.7948794258143	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGTTACTTGAGTCC	NA	False	NA	-16	True	AGTAAA	-14	NA	145776637	145760180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145764697_145764893_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.12	chr2	-	1328	7	NIC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	-2	-782	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	96.5119451443994	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGTTACTTGAGTCC	NA	False	NA	-16	True	AGTAAA	-14	NA	145776636	145760180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145774732_145774886_145776473
ES.20247.16	chr2	-	5256	12	NIC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	-3	-783	intron_retention	FALSE	canonical	3	204	junction_6	21.3406065425354	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTGTTACTTGAGTC	NA	False	NA	-17	True	AGTAAA	-13	NA	145776637	145760181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145765845_145766634_145766695_145767427_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.17	chr2	-	2532	14	NNC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	-2	-784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.0309475465929	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTTGTTACTTGAGT	NA	False	NA	-18	True	AGTAAA	-12	NA	145776636	145760182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768509_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.18	chr2	-	1866	14	NNC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	14	-784	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.6399576557434	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTTGTTACTTGAGT	NA	False	NA	-18	True	AGTAAA	-12	NA	145776620	145760182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_145760203_145761805_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.19	chr2	-	2231	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	300	897	0	-897	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTTATGTATTTAC	NA	False	NA	0	True	TATAAA	-26	NA	145776634	145760295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.2	chr2	-	3249	1	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	AAGAAA	-28	NA	145751333	145748084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_145748100_145751300
ES.20247.20	chr2	-	4850	12	NIC	ENSMUSG00000001767.6	novel	3428	14	NA	NA	-2	-902	intron_retention	FALSE	canonical	3	204	junction_6	26.7479820819169	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTAAATGTTTTTATGTA	NA	False	NA	-5	True	TATAAA	-21	NA	145776636	145760300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.3	chr2	-	4652	3	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	145758100	145750319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_145754445_145757449_145757598_145757721
ES.20247.4	chr2	-	3004	1	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTAGCATTCTGTTTGC	NA	False	NA	NA	False	AATAAA	-23	NA	145758584	145755580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_145755600_145758600
ES.20247.5	chr2	-	5991	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	309	-2872	9	2872	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGCAAGCAGGGGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	145776625	145756526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.6	chr2	-	5783	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	297	-2652	-3	2652	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGTGTGTGAGACAC	NA	False	NA	NA	False	ATTAAA	-27	NA	145776637	145756746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.7	chr2	-	4281	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	301	-1154	1	1154	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATTCATAGTCAACAA	NA	False	NA	NA	False	ATTAAA	-18	NA	145776633	145758244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.8	chr2	-	3417	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	319	-308	19	308	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAAAACAGTACTACTA	NA	False	NA	NA	False	AATAAA	-18	NA	145776615	145759090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20247.9	chr2	-	3118	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	307	3	7	-3	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCCACAGTGATTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	145776627	145759401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ES.20248.1	chr2	+	159	1	Intergenic	novelGene_16740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145797580	145797739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_145797600_145797700
ES.20249.1	chr2	+	172	1	Intergenic	novelGene_16741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTGTG	NA	False	NA	NA	False	NA	NA	NA	145917402	145917574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_145917400_145917600
ES.2025.1	chr1	-	2384	14	NNC	ENSMUSG00000087236.4	novel	3526	23	NA	NA	-12557	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.737820234355803	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAATCCTATAAAAAA	5866	False	NA	NA	False	NA	NA	NA	179540402	179522852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179523380_179525341_179525518_179526172_179526321_179526543_179526651_179526858_179527026_179527801_179527937_179529946_179530222_179532674_179532783_179533313_179533433_179535313_179535538_179535961_179536107_179538855_179538911_179540016_179540108_179540295
ES.20250.1	chr2	+	376	1	Intergenic	novelGene_16742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAAATACTGCAT	NA	False	NA	NA	False	NA	NA	NA	146028714	146029090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146028700_146029100
ES.20251.1	chr2	-	223	1	Intergenic	novelGene_16743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATGGTGACTTTAGC	NA	False	NA	NA	False	NA	NA	NA	146047393	146047170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146047200_146047400
ES.20252.1	chr2	+	2911	1	FSM	ENSMUSG00000068154.6	ENSMUST00000089257.6	3100	1	185	4	185	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGTGGTCTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	146064025	146066936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146064000_146066900
ES.20253.1	chr2	+	3541	1	Intergenic	novelGene_16744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCCTTCAAGGCTCAC	NA	False	NA	NA	False	ACTAAA	-8	NA	146139419	146142960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146139400_146143000
ES.20254.1	chr2	+	177	1	Intergenic	novelGene_16745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	146159075	146159252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146159100_146159300
ES.20255.1	chr2	-	9699	41	FSM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-57	1388	-35	-1388	multi-exon	FALSE	canonical	3	23	junction_26	5.33291665038935	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTCAAAAGCATTCTGC	NA	False	NA	19	True	AATAAA	-32	NA	146353981	146083186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.10	chr2	-	6055	21	NIC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-149	1018	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	7.824800316941	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146248352	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261
ES.20255.11	chr2	-	8662	40	NIC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-14	1018	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	7.39022223044643	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146353960	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.12	chr2	-	8670	40	NIC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-40	1018	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	7.49946305331922	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146353871	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.13	chr2	-	9171	41	NNC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-27	1018	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	7.31911026013408	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146353973	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187830_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.14	chr2	-	8575	42	NNC	ENSMUSG00000037110.21	novel	8245	42	NA	NA	1	977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.3359918026626	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAATAAAAA	NA	False	NA	-37	True	NA	NA	NA	146353830	146084087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146084995_146085066_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.17	chr2	-	8507	40	NNC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-23	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	7.45170733076164	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAATAAAAA	NA	False	NA	-37	True	NA	NA	NA	146353969	146084087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289256_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.18	chr2	-	2155	3	NNC	ENSMUSG00000037110.21	novel	5686	31	NA	NA	16784	977	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAATAAAAA	NA	False	NA	-37	True	NA	NA	NA	146086511	146084087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146084993_146085066_146085952_146086146
ES.20255.19	chr2	-	4965	31	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	76073	4652	11361	253	3prime_fragment	FALSE	canonical	3	23	junction_26	5.41848687365763	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTAGGATTTATAGTT	NA	False	NA	NA	False	NA	NA	NA	146277851	146086450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758
ES.20255.2	chr2	-	5835	13	NNC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	39123	-1417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	9.61191390353081	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTGATTTTTTTTC	7570	False	NA	-10	True	AATAAA	-26	NA	146190480	146083215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189123_146190367
ES.20255.20	chr2	-	6276	40	NIC	ENSMUSG00000037110.21	novel	3095	19	NA	NA	-45	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.39896441325705	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGAGCATTTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146353991	146100488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146100865_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.22	chr2	-	6123	40	NIC	ENSMUSG00000037110.21	novel	3095	19	NA	NA	-23	-136	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.39896441325705	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATATTTCCTAACTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146353969	146100619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146100865_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.23	chr2	-	5959	39	NNC	ENSMUSG00000037110.21	novel	3730	16	NA	NA	-11	-26809	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.49926127479167	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGCTCCTGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	146353957	146127292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146127508_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.24	chr2	-	6265	39	NNC	ENSMUSG00000037110.21	novel	3730	16	NA	NA	-53	46424	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.385694040122	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCATAGTCTTCTCCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	146353999	146156181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146156661_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.25	chr2	-	6425	38	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-57	74387	-35	46420	5prime_fragment	FALSE	canonical	3	23	junction_23	5.31505572736096	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTCCATAGTCTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	146353981	146156185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.26	chr2	-	5999	37	NNC	ENSMUSG00000037110.21	novel	8245	42	NA	NA	-45	45906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.6447178255938	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGAATATAGAGTTTGTT	NA	False	NA	NA	False	AATACA	-15	NA	146353991	146156699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199207_146199289_146199780_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277727_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146321296_146321350_146327040_146327152_146353713
ES.20255.27	chr2	-	9184	15	NNC	ENSMUSG00000037110.21	novel	5686	31	NA	NA	2672	25424	intron_retention	FALSE	canonical	0	0	junction_14	9.05538513813742	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGGGGTGGGCACAG	9253	False	NA	NA	False	NA	NA	NA	146252124	146177181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248372_146252092
ES.20255.28	chr2	-	3792	27	NNC	ENSMUSG00000037110.21	novel	3730	16	NA	NA	-22	3301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.78886129371927	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAAGTCTCAGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	146353968	146199304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146199423_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.29	chr2	-	6231	1	Intergenic	novelGene_16746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACCAAAACAAGCAA	NA	False	NA	NA	False	NA	NA	NA	146240915	146234684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146234700_146240900
ES.20255.31	chr2	-	4522	21	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-45	163430	-23	1526	5prime_fragment	FALSE	canonical	3	23	junction_6	6.54580018026826	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146353969	146245228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.32	chr2	-	8263	20	NIC	ENSMUSG00000037110.21	novel	8245	42	NA	NA	-26	1524	intron_retention	FALSE	canonical	3	23	junction_5	6.54200152350319	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146353972	146245230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146246960_146248261_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.33	chr2	-	6402	1	NIC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	3163	1523	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TACAAAAAAAAAAAAAAAAA	9744	False	NA	NA	False	NA	NA	NA	146251633	146245231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_146245200_146251600
ES.20255.34	chr2	-	3178	14	ISM	ENSMUSG00000037110.21	ENSMUST00000109982.9	3730	16	-102	7263	-9	2111	5prime_fragment	FALSE	canonical	3	23	junction_11	6.36837601102129	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAAATATATGACATCT	NA	False	NA	NA	False	NA	NA	NA	146353933	146269260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.35	chr2	-	6164	13	FSM	ENSMUSG00000037110.21	ENSMUST00000135974.2	4159	13	71	-2076	-22	2076	multi-exon	FALSE	canonical	3	23	junction_10	5.6494837522261	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAACAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146353853	146269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.4	chr2	-	9599	41	NNC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	-27	-1417	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	7.31432669491868	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTGATTTTTTTTC	NA	False	NA	-10	True	AATAAA	-26	NA	146353973	146083215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146199943_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.5	chr2	-	3715	3	NNC	ENSMUSG00000037110.21	novel	1194	4	NA	NA	13166	-1417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTGATTTTTTTTC	9082	False	NA	-10	True	AATAAA	-26	NA	146090129	146083215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146085001_146085066_146086956_146090088
ES.20255.6	chr2	-	8118	31	NNC	ENSMUSG00000037110.21	novel	11030	41	NA	NA	11404	-1417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.12602130333303	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTGATTTTTTTTC	NA	False	NA	-10	True	AATAAA	-26	NA	146277808	146083215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195129_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758
ES.20255.7	chr2	-	3384	1	ISM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	266996	1746	16367	1520	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGATTGTTCTGAGGT	NA	False	NA	NA	False	GATAAA	-16	NA	146086928	146083544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_146083500_146086900
ES.20255.8	chr2	-	8843	41	FSM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	-61	2248	-39	1018	multi-exon	FALSE	canonical	3	23	junction_26	5.33291665038935	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146353985	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20255.9	chr2	-	9063	42	NNC	ENSMUSG00000037110.21	novel	8245	42	NA	NA	-45	1018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.0049363188181	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGATGTTTTAAAAATAG	NA	False	NA	4	True	NA	NA	NA	146353991	146084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199207_146199423_146199876_146200006_146203310_146203440_146229147_146229304_146229527_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ES.20256.1	chr2	+	126	1	Intergenic	novelGene_16747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	146371814	146371940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146371800_146371900
ES.20257.1	chr2	-	330	1	Intergenic	novelGene_16748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGATTCTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	146438538	146438208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146438200_146438500
ES.20258.1	chr2	-	158	1	Intergenic	novelGene_16749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	146652478	146652320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146652300_146652500
ES.20259.1	chr2	+	2229	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	-45	-1	-45	1	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACTGTAATTAGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	146697738	146812018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ES.20259.10	chr2	+	3774	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	55	76421	10	4381	5prime_fragment	FALSE	canonical	3	96	junction_5	17.8146007533147	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCATTGCTGTCAGTGC	NA	False	NA	NA	False	AATAAA	-16	NA	146697838	146735596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
ES.20259.11	chr2	+	3608	1	Intergenic	novelGene_16750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAGAAAGAAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	146721363	146724971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146721400_146725000
ES.20259.12	chr2	+	1100	9	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	35059	8	35014	-3	3prime_fragment	FALSE	canonical	3	86	junction_1	12.3332629502496	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGCGTCACTGTAA	NA	False	NA	NA	False	AATAAA	-7	NA	146732842	146812009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ES.20259.2	chr2	+	2089	13	NIC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	33.9094996522607	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTAATTAGGTGTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	146697799	146812020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146697964_146703039_146703103_146705626_146705790_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ES.20259.3	chr2	+	2575	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	16	77659	16	3143	5prime_fragment	FALSE	canonical	3	96	junction_5	17.8146007533147	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCCCTTTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	146697799	146734358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
ES.20259.4	chr2	+	3399	5	NNC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	17	-2388	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	57.1358031360372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTTCTACCCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	146697800	146728827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146725898
ES.20259.5	chr2	+	2428	12	NIC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	19	-3	intron_retention	FALSE	canonical	0	0	junction_11	37.4796914705454	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGCGTCACTGTAA	NA	False	NA	NA	False	AATAAA	-7	NA	146697802	146812009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146811463
ES.20259.6	chr2	+	3963	16	NNC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.7988215356702	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCACTGTAATTAGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	146697809	146812017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146792644_146794296_146794897_146794985_146798119_146798217_146811463_146811508_146811590_146811746_146811876
ES.20259.7	chr2	+	2213	15	NNC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.0080774545631	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGCGTCACTGTAA	NA	False	NA	NA	False	AATAAA	-7	NA	146697819	146812009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146697964_146700864_146700939_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ES.20259.8	chr2	+	4308	6	ISM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	37	75905	-8	4897	5prime_fragment	FALSE	canonical	3	96	junction_5	17.8146007533147	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGTGTACCTAATTCC	NA	False	NA	NA	False	NA	NA	NA	146697820	146736112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900
ES.20259.9	chr2	+	2048	8	NIC	ENSMUSG00000074749.11	novel	2183	14	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_5	55.0472895030505	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGCGTCACTGTAA	NA	False	NA	NA	False	AATAAA	-7	NA	146697821	146812009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146697964_146703039_146703103_146705626_146705790_146730940_146731587_146732900_146733205_146794897_146794985_146798119_146798217_146811463
ES.2026.1	chr1	-	180	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAATAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	179566070	179565890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179565900_179566100
ES.20260.1	chr2	+	176	1	Intergenic	novelGene_16751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGCA	NA	False	NA	NA	False	NA	NA	NA	146833485	146833661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146833500_146833700
ES.20261.1	chr2	+	3020	1	Intergenic	novelGene_16752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGCACATCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	146850305	146853325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_146850300_146853300
ES.20261.10	chr2	+	3402	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.878798953311	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGGTGTCTG	NA	False	NA	2	True	AATAAA	-14	NA	146854932	146919912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866434_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.100	chr2	+	3324	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	67	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	209.587857841474	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854982	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919413
ES.20261.101	chr2	+	2963	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	69	-343	combination_of_known_splicesites	FALSE	canonical	2	12	junction_4	213.242900089957	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146854984	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.102	chr2	+	3355	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	69	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	212.390644730611	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854984	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146892005_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.103	chr2	+	3322	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	69	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	211.97862387464	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854984	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889628_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.104	chr2	+	4788	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	69	-342	intron_retention	FALSE	canonical	3	956	junction_9	75.0688799349896	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTATCTGTGTGTA	NA	False	NA	17	True	AATAAA	-18	NA	146854984	146919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.107	chr2	+	6315	23	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	69	-345	intron_retention	FALSE	canonical	3	17	junction_7	236.814783608493	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTCTTTTATCTGTGT	NA	False	NA	14	True	AATAAA	-15	NA	146854984	146919575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146870171_146871257_146871333_146871414_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.108	chr2	+	5566	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	74	-341	intron_retention	FALSE	canonical	0	0	junction_11	375.407371280074	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTATCTGTGTGTAT	NA	False	NA	18	True	AATAAA	-19	NA	146854989	146919579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871651_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146902926_146902999_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804
ES.20261.109	chr2	+	4844	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	87	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	212.390644730611	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146855002	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146893512_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.11	chr2	+	3375	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	20	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	211.917501279141	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854935	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871542_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.111	chr2	+	3239	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_8	199.831742541048	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146855006	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.114	chr2	+	3232	30	NNC	ENSMUSG00000027433.6	novel	623	5	NA	NA	420	-343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.878798953311	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146855335	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855678_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.115	chr2	+	3405	30	NNC	ENSMUSG00000027433.6	novel	623	5	NA	NA	427	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.878798953311	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTGGTGTCTGATT	NA	False	NA	12	True	AATAAA	-24	NA	146855342	146919922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855513_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.116	chr2	+	3394	30	NNC	ENSMUSG00000027433.6	novel	623	5	NA	NA	596	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.878798953311	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTTGGTGTCTGGTG	NA	False	NA	5	True	AATAAA	-17	NA	146855511	146919915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855678_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.117	chr2	+	3282	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-5046	-32	intron_retention	FALSE	canonical	3	956	junction_7	75.4337980451544	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	2766	False	NA	-22	True	ATTAAA	-34	NA	146866425	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.118	chr2	+	2625	27	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-4789	-342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	223.461740367974	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTATCTGTGTGTA	3023	False	NA	17	True	AATAAA	-18	NA	146866682	146919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146866747_146867114_146867227_146868300_146868360_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.119	chr2	+	2994	27	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	12198	0	-4358	0	3prime_fragment	FALSE	canonical	3	956	junction_6	76.5135637896117	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	3454	False	NA	10	True	AATAAA	-22	NA	146867113	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.120	chr2	+	5302	24	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-3021	-32	intron_retention	FALSE	canonical	3	956	junction_4	74.5175535327016	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	4791	False	NA	-22	True	ATTAAA	-34	NA	146868450	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.121	chr2	+	2549	24	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-2964	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	235.876485572693	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	4848	False	NA	10	True	AATAAA	-22	NA	146868507	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876809_146880146_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.122	chr2	+	2345	20	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	16497	32	-59	-32	3prime_fragment	FALSE	canonical	3	994	junction_18	68.3227634101549	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	7753	False	NA	-22	True	ATTAAA	-34	NA	146871412	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.123	chr2	+	3436	15	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	141	-2614	intron_retention	FALSE	non_canonical	0	0	junction_12	293.490743170088	1060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAATAAAATAAAACTA	7953	False	NA	NA	False	AATGAA	-32	NA	146871612	146917306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146893637_146905229_146905281_146910711_146910776_146916804
ES.20261.124	chr2	+	4887	17	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	141	0	intron_retention	FALSE	canonical	3	994	junction_15	72.4831877058398	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	7953	False	NA	10	True	AATAAA	-22	NA	146871612	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146871897_146876773_146876819_146878583_146878716_146880088_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.125	chr2	+	3287	15	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	3705	146	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	287.181065332856	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTTTCTTGGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	146875176	146910966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910627
ES.20261.127	chr2	+	1965	16	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	5316	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	283.529390990697	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146876787	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146916804_146916947_146919402
ES.20261.128	chr2	+	3034	13	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-2424	-32	intron_retention	FALSE	canonical	3	994	junction_11	73.9182637933429	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146882041	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.129	chr2	+	1435	14	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-1732	-342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	304.999485885686	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTATCTGTGTGTA	NA	False	NA	17	True	AATAAA	-18	NA	146882733	146919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889558_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.130	chr2	+	7622	5	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	44108	32	-4336	-32	intron_retention	FALSE	canonical	3	994	junction_4	95.611191813511	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146899023	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804
ES.20261.131	chr2	+	4363	6	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	44911	32	-3533	-32	3prime_fragment	FALSE	canonical	3	994	junction_4	98.4613629806128	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146899826	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.132	chr2	+	1128	6	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	47836	342	-608	-342	3prime_fragment	FALSE	canonical	3	994	junction_4	98.4613629806128	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTATCTGTGTGTA	NA	False	NA	17	True	AATAAA	-18	NA	146902751	146919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.133	chr2	+	5164	3	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	8006	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	3000	False	NA	-22	True	ATTAAA	-34	NA	146911365	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146913502_146914404_146916947_146919402
ES.20261.134	chr2	+	3274	2	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	59243	32	10799	-32	3prime_fragment	FALSE	canonical	3	1236	junction_1	0	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	5793	False	NA	-22	True	ATTAAA	-34	NA	146914158	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146916947_146919402
ES.20261.14	chr2	+	3309	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	24	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	215.967991770512	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854939	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.17	chr2	+	5126	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	24	-32	intron_retention	FALSE	canonical	3	956	junction_9	76.1881110009135	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854939	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.2	chr2	+	4112	30	NNC	ENSMUSG00000027433.6	novel	623	5	NA	NA	-2201	817	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	211.878798953311	1066	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACATGTGTCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	146852714	146920737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146852777_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.22	chr2	+	4229	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	24	-819	24	819	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGTCTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	146854939	146920739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.23	chr2	+	3934	26	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	25	-334	intron_retention	FALSE	canonical	3	17	junction_9	223.120286840977	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGTGTATATTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	146854940	146919586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868525_146869226_146870171_146871257_146871333_146871414_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.24	chr2	+	3647	27	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	25	-32	intron_retention	FALSE	canonical	0	0	junction_26	219.7519176832	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854940	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916950_146919396
ES.20261.27	chr2	+	3345	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	28	-32	intron_retention	FALSE	canonical	2	37	junction_11	211.350630856019	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854943	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.3	chr2	+	3679	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	-241	-4	-241	4	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTGGTGTCTGATTAT	NA	False	NA	14	True	AATAAA	-26	NA	146854674	146919924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.30	chr2	+	3245	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	28	-343	intron_retention	FALSE	canonical	3	956	junction_9	75.5117156763742	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146854943	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.31	chr2	+	1494	13	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	29	47860	29	-8147	5prime_fragment	FALSE	canonical	3	956	junction_9	64.5890857653211	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTATTGTACATTAT	NA	False	NA	NA	False	TATAAA	-23	NA	146854944	146872060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788
ES.20261.32	chr2	+	3364	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	29	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	212.139130528872	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854944	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868443_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.34	chr2	+	3379	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	30	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	209.587857841474	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854945	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916954_146919402
ES.20261.36	chr2	+	3336	29	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	32	-32	intron_retention	FALSE	canonical	2	3	junction_22	282.293540232756	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854947	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893637_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.37	chr2	+	2774	28	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	32	9113	32	-13	5prime_fragment	FALSE	canonical	3	956	junction_9	69.0320098312682	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGCTTCCTGCATTGATA	NA	False	NA	NA	False	AATAAA	-24	NA	146854947	146910807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
ES.20261.38	chr2	+	3550	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	34	-32	intron_retention	FALSE	canonical	3	956	junction_9	75.5117156763742	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854949	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.39	chr2	+	2796	28	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	34	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	216.73776611209	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGCTTCCTGCATTGATA	NA	False	NA	NA	False	AATAAA	-24	NA	146854949	146910807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866610_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
ES.20261.4	chr2	+	3431	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	-215	218	-215	-218	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGAGTCCTGGGTTT	NA	False	NA	NA	False	AATACA	-41	NA	146854700	146919702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.40	chr2	+	5768	29	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	34	-8	intron_retention	FALSE	canonical	3	17	junction_13	275.883911089355	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGGTGTCTG	NA	False	NA	2	True	AATAAA	-14	NA	146854949	146919912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804
ES.20261.42	chr2	+	2847	28	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	35	-21	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	213.555844606117	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTAGACGCTTCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	146854950	146910799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910627
ES.20261.45	chr2	+	2926	28	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	39	8954	39	146	5prime_fragment	FALSE	canonical	3	956	junction_9	69.0320098312682	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTTTCTTGGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	146854954	146910966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
ES.20261.47	chr2	+	3086	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	39	-333	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	208.224125796255	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTGTATATTTTTAC	NA	False	NA	26	True	AATAAA	-27	NA	146854954	146919587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.48	chr2	+	3372	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	285.600112910778	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854955	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878585_146878716_146880076_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.5	chr2	+	3628	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-214	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	209.587857841474	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854701	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919390
ES.20261.50	chr2	+	3446	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-32	intron_retention	FALSE	canonical	3	956	junction_9	74.5674858700466	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854955	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.54	chr2	+	2962	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	216.070177092007	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTATCTGTGTGTA	NA	False	NA	17	True	AATAAA	-18	NA	146854955	146919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.55	chr2	+	3305	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	212.3358847273	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854955	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866691_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.56	chr2	+	5507	29	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	40	343	40	-343	intron_retention	FALSE	canonical	3	956	junction_9	70.0137741550087	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146854955	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804
ES.20261.57	chr2	+	4056	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	0	intron_retention	FALSE	canonical	3	956	junction_7	75.4949103018308	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854955	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.58	chr2	+	3480	29	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	0	intron_retention	FALSE	canonical	0	0	junction_13	287.88601414945	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854955	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878585_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916950_146919396
ES.20261.6	chr2	+	3648	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	208.224125796255	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854725	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.60	chr2	+	1340	14	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	40	43126	40	-3413	5prime_fragment	FALSE	canonical	3	956	junction_9	69.62707084233	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAAGAGGAT	NA	False	NA	NA	False	NA	NA	NA	146854955	146876794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773
ES.20261.62	chr2	+	3383	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	211.586234995278	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854955	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871236_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.63	chr2	+	3016	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	212.090893175297	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTACTTTGTGTATTTC	NA	False	NA	2	True	AATAAA	-3	NA	146854955	146919563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910762_146916811_146916947_146919402
ES.20261.65	chr2	+	3040	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	-343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	212.180912420791	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146854955	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869294_146869519_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.66	chr2	+	3484	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	40	2	intron_retention	FALSE	canonical	3	956	junction_9	74.9818345347997	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTGGTGTCTGATT	NA	False	NA	12	True	AATAAA	-24	NA	146854955	146919922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.68	chr2	+	3433	29	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	43	-35	intron_retention	FALSE	non_canonical	0	0	junction_27	215.567106247494	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTAAAAAAATAAAAATAAA	NA	False	NA	-25	True	ATTAAA	-31	NA	146854958	146919885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916802_146916947_146919402
ES.20261.69	chr2	+	2774	26	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	43	142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	301.044910935229	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCCTGTGTTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	146854958	146910962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146892005_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711
ES.20261.7	chr2	+	3696	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	209.287802001424	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854737	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910627_146910776_146916804_146916947_146919402
ES.20261.70	chr2	+	3404	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	43	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	209.587857841474	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTGGTGTCTGATTAT	NA	False	NA	14	True	AATAAA	-26	NA	146854958	146919924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916950_146919396
ES.20261.71	chr2	+	3332	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_4	213.242900089957	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854958	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.73	chr2	+	2805	27	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	44	-5415	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	215.979384836971	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACTTGTAAGAGAATA	NA	False	NA	NA	False	ATTAAA	-8	NA	146854959	146905405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905138
ES.20261.77	chr2	+	3367	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	46	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	212.320792448748	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854961	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884027_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.78	chr2	+	3065	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	46	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	209.587857841474	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTATATTTTTACT	NA	False	NA	27	True	AATAAA	-28	NA	146854961	146919588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916950_146919396
ES.20261.79	chr2	+	3490	31	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	280.122197541636	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTGGTGTCTGATT	NA	False	NA	12	True	AATAAA	-24	NA	146854961	146919922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146901350_146901451_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.8	chr2	+	3468	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	13	-32	intron_retention	FALSE	canonical	3	956	junction_8	74.4649623127877	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854928	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.80	chr2	+	3357	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	47	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	211.97862387464	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854962	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889645_146891215_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.83	chr2	+	3047	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	53	334	53	-334	multi-exon	FALSE	canonical	3	956	junction_9	74.1082057489866	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGTGTATATTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	146854968	146919586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.85	chr2	+	3269	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	53	-32	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	274.209008352376	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854968	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876749_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.88	chr2	+	3339	29	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	53	-32	intron_retention	FALSE	canonical	2	37	junction_24	277.270487916381	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854968	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903329_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.9	chr2	+	3312	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_12	207.575877447162	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854929	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.90	chr2	+	3251	29	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	53	2586	53	-2586	5prime_fragment	FALSE	canonical	3	956	junction_9	70.0137741550087	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGTTTACTGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	146854968	146917334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804
ES.20261.91	chr2	+	3323	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	212.288397828418	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854968	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880146_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.92	chr2	+	5110	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	53	0	intron_retention	FALSE	canonical	3	956	junction_8	75.5306240638045	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854968	146919920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.94	chr2	+	3258	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	54	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	215.882251895966	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854969	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.95	chr2	+	3330	31	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	56	-32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	325.46343197901	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854971	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870116_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146881140_146881229_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.96	chr2	+	3114	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	56	-343	intron_retention	FALSE	canonical	3	956	junction_8	74.4649623127877	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTATCTGTGTGT	NA	False	NA	16	True	AATAAA	-17	NA	146854971	146919577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20261.97	chr2	+	2220	22	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	56	830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	239.308243431248	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGAATCCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	146854971	146890572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146890442
ES.20261.98	chr2	+	3178	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	58	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	217.342788049539	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAAGCT	NA	False	NA	-22	True	ATTAAA	-34	NA	146854973	146919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ES.20262.1	chr2	-	175	1	Intergenic	novelGene_16753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAGAGATGGAA	NA	False	NA	NA	False	NA	NA	NA	146851562	146851387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146851400_146851600
ES.20263.1	chr2	-	3326	1	Antisense	novelGene_ENSMUSG00000027433.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCATAGTATTTTATC	NA	False	NA	NA	False	NA	NA	NA	146855395	146852069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_146852100_146855400
ES.20264.1	chr2	-	5063	1	Intergenic	novelGene_16754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTGACGGAATGCCTGA	NA	False	NA	NA	False	NA	NA	NA	146861717	146856654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_146856700_146861700
ES.20265.1	chr2	-	5575	10	Antisense	novelGene_ENSMUSG00000027433.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.314269680527355	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTAATAACTCTGCCCT	NA	False	NA	NA	False	NA	NA	NA	146898124	146878420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_146878714_146880086_146880206_146882733_146882870_146883905_146884015_146884092_146884182_146884777_146884851_146889552_146889639_146891211_146891308_146891900_146891983_146893632
ES.20265.2	chr2	-	9262	1	Antisense	novelGene_ENSMUSG00000027433.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTACTACAAACTACTGT	NA	False	NA	NA	False	AATAGA	-41	NA	146898125	146888863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_146888900_146898100
ES.20266.1	chr2	-	2135	1	Antisense	novelGene_ENSMUSG00000027433.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146903289	146901154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_146901200_146903300
ES.20267.1	chr2	-	1804	2	FSM	ENSMUSG00000054160.3	ENSMUST00000067020.3	1725	2	-81	2	-81	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATACGGATTGTTACCG	NA	False	NA	NA	False	AATAAA	-16	NA	146927446	146925237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_146926410_146926814
ES.20267.2	chr2	-	2160	1	Genic_Genomic	ENSMUSG00000054160.3	novel	NA	NA	NA	NA	-33	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATACGGATTGTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	146927398	146925238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_146925200_146927400
ES.20268.1	chr2	+	179	1	Intergenic	novelGene_16755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	147695984	147696163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_147696000_147696200
ES.20269.1	chr2	+	177	1	Intergenic	novelGene_16756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGGGAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	148243136	148243313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_148243100_148243300
ES.2027.1	chr1	-	8575	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	-29	-40	-29	40	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGAGATGTGCGGTGTC	NA	False	NA	39	True	NA	NA	NA	179631274	179572418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.13	chr1	-	9316	4	NIC	ENSMUSG00000087236.4	novel	2643	19	NA	NA	-13172	-47033	intron_retention	FALSE	canonical	3	262	junction_3	53.2687108493866	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTGTCAAGTTAATAA	NA	False	NA	-4	True	AATAAA	-16	NA	179586008	179572461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179583220_179585499
ES.2027.17	chr1	-	7605	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.8806063833461	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATACTGTCAAGTTAAT	NA	False	NA	-6	True	AATAAA	-14	NA	179631227	179572463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179573219_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610599_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.18	chr1	-	8417	35	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	21	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_25	55.2764755960911	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATACTGTCAAGTTAA	NA	False	NA	-7	True	AATAAA	-13	NA	179631224	179572464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.19	chr1	-	11199	34	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	25	-21	intron_retention	FALSE	canonical	3	225	junction_17	32.5791259710234	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACTGACAAGAGAA	NA	False	NA	-22	True	AGTAAA	-36	NA	179631220	179572479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179587927_179590109_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.2	chr1	-	8432	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_35	53.8903345996785	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTCAAGTTAATAATTA	NA	False	NA	-1	True	AATAAA	-19	NA	179631227	179572458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626848_179630917
ES.2027.20	chr1	-	7804	33	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	286	-24	combination_of_known_splicesites	FALSE	canonical	1	1	junction_28	56.9472069113139	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179623424	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241
ES.2027.21	chr1	-	8180	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-189	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	54.8348913204216	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179631434	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179631408
ES.2027.22	chr1	-	8406	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	13	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	54.9609137552891	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179631232	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623433_179626775_179626904_179630917
ES.2027.23	chr1	-	7833	33	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	224	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	57.0698499510687	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179623486	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615806_179617863_179617981_179619910_179620119_179621207_179621389_179623241
ES.2027.25	chr1	-	6299	19	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	21	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.3164945219074	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179631224	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179623306_179623496_179626775_179626904_179630917
ES.2027.26	chr1	-	8176	35	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	2734	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	55.5644907270622	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179626903	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179618003_179619910_179620119_179621207_179621389_179623241_179623496_179626775
ES.2027.27	chr1	-	7493	31	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	3600	-24	combination_of_known_splicesites	FALSE	canonical	1	1	junction_22	58.694169689634	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179620110	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910
ES.2027.28	chr1	-	8539	37	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	17	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	79.8028048023438	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179631228	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583004_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179622047_179622113_179623241_179623496_179626775_179626904_179630917
ES.2027.29	chr1	-	8349	36	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-12	-24	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	54.4211843506042	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAACTGACAAGA	NA	False	NA	-25	True	AGTAAA	-33	NA	179631183	179572482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591168_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.30	chr1	-	8451	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	-23	78	-23	-78	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTAAGCATAATTTAGTA	NA	False	NA	4	True	ATTAAA	-36	NA	179631268	179572536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.31	chr1	-	5121	1	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	2313	-82	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTCTAAGCATAATTT	NA	False	NA	0	True	ATTAAA	-32	NA	179577661	179572540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179572500_179577700
ES.2027.32	chr1	-	13047	32	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	9	-90	intron_retention	FALSE	canonical	3	233	junction_21	32.8813652870826	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCACAAAAGCTCTAAG	NA	False	NA	-8	True	ATTAAA	-24	NA	179631236	179572548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614666_179615753_179615905_179617213_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.33	chr1	-	10234	34	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	-90	intron_retention	FALSE	canonical	3	225	junction_17	32.5679624218117	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCACAAAAGCTCTAAG	NA	False	NA	-8	True	ATTAAA	-24	NA	179631227	179572548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.34	chr1	-	8520	37	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	27	-93	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	66.7161390510313	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATTCACAAAAGCTCT	NA	False	NA	-11	True	ATTAAA	-21	NA	179631218	179572551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055_179582190_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.37	chr1	-	8112	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	-37	431	-37	12	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGATAGTGTGTAATGAA	NA	False	NA	NA	False	AATAAA	-30	NA	179631282	179572889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.38	chr1	-	3199	5	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-944	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	149.738730794674	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGACAGGTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	179582089	179572901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055
ES.2027.40	chr1	-	8182	35	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	-3	intron_retention	FALSE	canonical	3	225	junction_18	32.454506354264	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTATGACAGGTAATTG	NA	False	NA	NA	False	AATAAA	-15	NA	179631227	179572904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.41	chr1	-	7528	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	-217	1195	-217	2	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCTGGTAGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	179631462	179573653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.42	chr1	-	6518	14	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	5	2	intron_retention	FALSE	canonical	3	236	junction_9	42.51946995723	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCTGGTAGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	179598478	179573653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363
ES.2027.44	chr1	-	7228	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_35	53.8903345996785	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCTGGTAGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	179631218	179573653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626848_179630917
ES.2027.45	chr1	-	8796	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_4	68.9996983134487	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTCTGGTAGATTT	NA	False	NA	-6	True	AATAAA	-15	NA	179631245	179573654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582051_179582190_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.46	chr1	-	7322	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.6640685646452	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTCTGGTAGATTT	NA	False	NA	-6	True	AATAAA	-15	NA	179631206	179573654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585596_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595809_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.48	chr1	-	6988	35	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	70.5574442647724	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631244	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179631147
ES.2027.50	chr1	-	7174	35	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	55.1986973919822	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631218	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.51	chr1	-	7942	35	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	0	intron_retention	FALSE	canonical	3	225	junction_18	26.6245847312353	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631227	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.52	chr1	-	7377	37	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_34	68.1725751310599	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631248	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179622047_179622113_179623241_179623496_179626775_179626904_179630917
ES.2027.53	chr1	-	7444	37	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	68.9949172846168	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631227	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179608791_179608945_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.54	chr1	-	5638	18	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-6615	0	intron_retention	FALSE	canonical	2	13	junction_4	73.9145209101979	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179605098	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067
ES.2027.56	chr1	-	7393	35	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_3	55.0627905182255	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631205	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576302_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.57	chr1	-	4571	8	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	3204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	117.422836147743	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179590268	179573655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179586226_179587927_179590109
ES.2027.58	chr1	-	7333	37	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_10	78.3437887033494	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCTGGTAGAT	NA	False	NA	-8	True	AATAAA	-13	NA	179631207	179573656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055_179582190_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591168_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.60	chr1	-	7315	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.3480191144783	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCTGGTAGAT	NA	False	NA	-8	True	AATAAA	-13	NA	179631220	179573656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576290_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609347_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.64	chr1	-	9492	35	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	26	junction_1	47.9524707013808	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCTGGTAGAT	NA	False	NA	-8	True	AATAAA	-13	NA	179631205	179573656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574086_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.66	chr1	-	7405	37	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.7080126709393	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCTGGTAGAT	NA	False	NA	-8	True	AATAAA	-13	NA	179631206	179573656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582051_179582190_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605387_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.67	chr1	-	7305	36	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	47.7029926755553	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCTGGTAGAT	NA	False	NA	-8	True	AATAAA	-13	NA	179631250	179573656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574086_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.73	chr1	-	7088	34	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	71.5128530704095	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGTGTCTGGTAGA	NA	False	NA	-9	True	AATAAA	-12	NA	179631224	179573657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.75	chr1	-	7312	36	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	54.9033287716153	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGTGTCTGGTAGA	NA	False	NA	-9	True	AATAAA	-12	NA	179631228	179573657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179618003_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.76	chr1	-	7072	34	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_16	56.2527420003043	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGTGTCTGGTAGA	NA	False	NA	-9	True	AATAAA	-12	NA	179631214	179573657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.79	chr1	-	7477	38	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_35	86.5929834178823	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGTGTCTGGTAGA	NA	False	NA	-9	True	AATAAA	-12	NA	179631216	179573657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055_179582190_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179622047_179622113_179623241_179623496_179626775_179626904_179630917
ES.2027.85	chr1	-	7159	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	1	1346	1	-149	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAATTGTACAATTTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	179631244	179573804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.86	chr1	-	7293	30	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	3640	-149	intron_retention	FALSE	canonical	3	225	junction_18	34.5908306463404	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAATTGTACAATTTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	179620070	179573804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617981_179619910
ES.2027.87	chr1	-	5204	16	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-4571	-155	intron_retention	FALSE	canonical	1	4	junction_9	102.249020641873	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTATATAAATTGTACA	NA	False	NA	NA	False	ATTAAA	-21	NA	179603054	179573810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179582055_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591168_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896
ES.2027.88	chr1	-	4288	27	ISM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	6	20565	6	2836	5prime_fragment	FALSE	canonical	3	225	junction_10	17.2006949082136	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTTTGAATTATT	NA	False	NA	NA	False	CATAAA	-19	NA	179631239	179593023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.89	chr1	-	4165	18	NIC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-23	-7792	intron_retention	FALSE	canonical	3	225	junction_1	18.4064077905186	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTGCCTTTGCTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	179631194	179603651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.90	chr1	-	2878	20	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-152	-7792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.9658259094987	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTGCCTTTGCTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	179631397	179603651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179603720_179605067_179605125_179605264_179605387_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.91	chr1	-	2916	20	NNC	ENSMUSG00000026491.14	novel	8506	36	NA	NA	-176	-7793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	60.1376076673796	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAACTGCCTTTGCTATT	NA	False	NA	NA	False	AATAAA	-23	NA	179631421	179603652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617968_179619884_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ES.2027.93	chr1	-	1120	2	FSM	ENSMUSG00000026491.14	ENSMUST00000147137.2	746	2	-64	-310	10	304	multi-exon	FALSE	canonical	3	284	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCATAAGGGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	179631235	179626101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179626904_179630917
ES.2027.94	chr1	-	2371	1	FSM	ENSMUSG00000026491.14	ENSMUST00000194536.2	3232	1	1165	-304	1165	304	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCATAAGGGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	179628472	179626101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179626100_179628500
ES.2027.95	chr1	-	5045	1	FSM	ENSMUSG00000026491.14	ENSMUST00000194536.2	3232	1	-1797	-16	-189	16	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTAGGCAGAATATAAC	NA	False	NA	NA	False	NA	NA	NA	179631434	179626389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179626400_179631400
ES.20270.1	chr2	-	3687	1	FSM	ENSMUSG00000074743.5	ENSMUST00000099270.5	3723	1	36	0	36	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCATCTCCTTCTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	148250072	148246385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_148246400_148250100
ES.20271.1	chr2	+	184	1	Intergenic	novelGene_16757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATTCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	148490261	148490445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_148490300_148490400
ES.20272.1	chr2	+	983	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	-24	-3	1	3	multi-exon	FALSE	canonical	3	586	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTAAATCTTGAGAAGG	NA	False	NA	18	True	AATAAA	-22	NA	148514521	148517950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_148514756_148517201
ES.20272.10	chr2	+	4119	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	26.4423902096615	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	474	False	NA	NA	False	AATAAA	-18	NA	148523045	148534869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523136_148525523_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.11	chr2	+	3499	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	123	610	-65	-610	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTATGGTACTTGCTA	494	False	NA	NA	False	NA	NA	NA	148523065	148534259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.12	chr2	+	3994	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-63	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	30.0506239535887	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	496	False	NA	NA	False	AATAAA	-16	NA	148523067	148534867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532043_148532626
ES.20272.13	chr2	+	1903	2	ISM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	142	7504	-46	1396	5prime_fragment	FALSE	canonical	3	53	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGACCACACTTTC	513	False	NA	NA	False	AATAAA	-6	NA	148523084	148527365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_148523136_148525513
ES.20272.14	chr2	+	5632	5	NIC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-46	-3	intron_retention	FALSE	canonical	3	53	junction_1	12.5971226873441	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTCTGCTTTGTAA	513	False	NA	NA	False	AATAAA	-15	NA	148523084	148534866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_148523136_148525513_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.16	chr2	+	3980	5	NIC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-36	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.6464847968933	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATAATGTCTGCTTTGT	523	False	NA	NA	False	AATAAA	-13	NA	148523094	148534864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_148523136_148525513_148526889_148529923_148530092_148531995_148532154_148532626
ES.20272.17	chr2	+	3376	7	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.2556509005455	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	527	False	NA	NA	False	AATAAA	-16	NA	148523098	148534867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523136_148525513_148525999_148527652_148527845_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.18	chr2	+	4361	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.2051277837473	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTCTGCTTTGTAA	541	False	NA	NA	False	AATAAA	-15	NA	148523112	148534866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523136_148525513_148527191_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.19	chr2	+	4812	6	NNC	ENSMUSG00000027439.10	novel	734	4	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4871402321646	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTCTGCTTTGTAAAA	564	False	NA	NA	False	AATAAA	-17	NA	148523135	148534868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523910_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.2	chr2	+	3723	7	Fusion	ENSMUSG00000027439.10_ENSMUSG00000036992.11	novel	734	4	NA	NA	15	-616	multi-exon	FALSE	canonical	1	2	junction_1	35.8116213291471	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCATTTTATGGTAC	NA	False	NA	NA	False	NA	NA	NA	148514560	148534253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_148514756_148521222_148521328_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.20	chr2	+	4039	5	ISM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	2569	2	-1020	-2	3prime_fragment	FALSE	canonical	3	65	junction_1	7.82224392358101	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	2940	False	NA	NA	False	AATAAA	-16	NA	148525511	148534867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.21	chr2	+	4690	3	NIC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	1271	0	intron_retention	FALSE	canonical	3	77	junction_1	0.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	5231	False	NA	NA	False	AATAAA	-18	NA	148527802	148534869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_148530092_148531995_148532154_148532626
ES.20272.3	chr2	+	4232	6	Fusion	ENSMUSG00000027439.10_ENSMUSG00000036992.11	novel	734	4	NA	NA	17	0	multi-exon	FALSE	canonical	0	0	junction_1	31.4871402321646	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	148514562	148534869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_148514756_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.4	chr2	+	4336	7	Fusion	ENSMUSG00000027439.10_ENSMUSG00000036992.11	novel	734	4	NA	NA	18	0	multi-exon	FALSE	canonical	1	2	junction_1	35.8116213291471	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	148514563	148534869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_148514756_148521222_148521328_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.5	chr2	+	1061	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	55	0	30	0	multi-exon	FALSE	canonical	3	22	junction_1	28	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514575	148517947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_148514756_148516383_148516519_148517201
ES.20272.6	chr2	+	2336	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	31	-1411	31	1411	multi-exon	FALSE	canonical	3	586	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAAATCTTCATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	148514576	148519358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_148514756_148517201
ES.20272.7	chr2	+	4296	7	NNC	ENSMUSG00000027439.10	novel	734	4	NA	NA	-2917	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.2801598673435	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	148520025	148534867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148520180_148521222_148521328_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.8	chr2	+	4205	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	30	-3	30	3	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCTTTGTAAAAGTCC	401	False	NA	NA	False	AATAAA	-21	NA	148522972	148534872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ES.20272.9	chr2	+	4025	5	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	-89	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.7980446393375	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGTCTGCTTTGTAA	470	False	NA	NA	False	AATAAA	-15	NA	148523041	148534866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_148523136_148525523_148526889_148529923_148530092_148531995_148532154_148532626
ES.20273.1	chr2	+	5340	1	Intergenic	novelGene_16758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAACAAACAAACCAA	NA	False	NA	NA	False	AAAAAG	-28	NA	148566037	148571377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_148566000_148571400
ES.20274.1	chr2	-	4344	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	-33	0	21	0	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGACTGTTTTTTTGG	NA	False	NA	0	True	AATAAA	-18	NA	148574366	148535904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ES.20274.2	chr2	-	3841	5	NNC	ENSMUSG00000027438.15	novel	4311	10	NA	NA	31186	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.26291952316697	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTTGACTGTTTTTT	NA	False	NA	-3	True	AATAAA	-15	NA	148543125	148535907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148543028
ES.20274.4	chr2	-	4725	6	NIC	ENSMUSG00000027438.15	novel	4311	10	NA	NA	3	-5	intron_retention	FALSE	canonical	0	0	junction_5	6.01331855134916	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACCTTTTGACTGTTTT	NA	False	NA	-5	True	AATAAA	-13	NA	148574330	148535909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_148539427_148540102_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148574185
ES.20274.5	chr2	-	4300	11	FSM	ENSMUSG00000027438.15	ENSMUST00000028926.13	4412	11	53	59	-1	-59	multi-exon	FALSE	canonical	0	0	junction_8	5.93295878967653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAACGTTTGTTTTAT	NA	False	NA	-59	True	AATAAA	-12	NA	148574334	148535963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148551236_148551354_148554594_148554675_148574185
ES.20274.6	chr2	-	2117	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	21	2173	-1	-2173	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGCCCTGGAATGGT	NA	False	NA	NA	False	AATGAA	-19	NA	148574312	148538077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ES.20274.7	chr2	-	4634	1	NIC	ENSMUSG00000027438.15	novel	4412	11	NA	NA	-21	-21383	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148574354	148569720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_148569700_148574400
ES.20275.1	chr2	-	821	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	44	-5	44	5	multi-exon	FALSE	canonical	3	2071	junction_1	68	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTGTTTCTGTCTCAG	NA	False	NA	-1	True	ATTAAA	-25	NA	148717452	148713636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_148713964_148714736_148714851_148717072
ES.20275.3	chr2	-	3764	1	NIC	ENSMUSG00000027447.7	novel	860	3	NA	NA	-41	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTCTGTTTGAGTTG	NA	False	NA	-13	True	ATTAAA	-13	NA	148717412	148713648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_148713600_148717400
ES.20276.1	chr2	+	2423	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	6	-379	6	379	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGTTGAATATATAT	NA	False	NA	NA	False	NA	NA	NA	149672713	149846691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
ES.20276.2	chr2	+	1982	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	15	53	15	-53	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTTTGCTTACGACTT	NA	False	NA	NA	False	NA	NA	NA	149672722	149846259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
ES.20276.3	chr2	+	2064	4	NIC	ENSMUSG00000074736.11	novel	2050	4	NA	NA	4	-53	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTTTGCTTACGACTT	NA	False	NA	NA	False	NA	NA	NA	149672792	149846259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
ES.20276.4	chr2	+	1423	3	NIC	ENSMUSG00000074736.11	novel	570	3	NA	NA	36	-51	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCTTACGACTTTT	NA	False	NA	NA	False	NA	NA	NA	149672877	149846261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_149672998_149772824_149772963_149845096
ES.20276.5	chr2	+	1966	5	NNC	ENSMUSG00000074736.11	novel	620	2	NA	NA	110	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3916899677855	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACGACTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	149672951	149846267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_149672998_149710446_149710500_149741337_149741896_149772824_149772963_149845096
ES.20276.6	chr2	+	4720	1	Antisense	novelGene_ENSMUSG00000074737.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAGTATATAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	149673297	149678017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_149673300_149678000
ES.20277.1	chr2	+	2627	2	Intergenic	novelGene_16759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACACACAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	149863443	149866388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_149865335_149865652
ES.20277.2	chr2	+	3577	2	Intergenic	novelGene_16760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTTTCTACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	149863902	149872188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_149865286_149869994
ES.20278.1	chr2	-	6202	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	49	-2124	-3	2124	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTATTTTTATTAGATA	NA	False	NA	NA	False	AATAAA	-19	NA	149978579	149954201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ES.20278.2	chr2	-	4621	3	FSM	ENSMUSG00000068134.14	ENSMUST00000109931.8	4033	3	26	-614	4	614	multi-exon	FALSE	canonical	3	13	junction_1	23.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAAAGTTCGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	149978572	149955711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961744_149961872_149978487
ES.20278.3	chr2	-	4116	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	12	-1	12	1	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTGAGACTCTTCAT	NA	False	NA	2	True	NA	NA	NA	149978616	149956324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ES.20278.4	chr2	-	4186	4	FSM	ENSMUSG00000068134.14	ENSMUST00000122859.8	4181	4	-6	1	-6	-1	multi-exon	FALSE	canonical	2	3	junction_1	24.3903441732356	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCTGAGACTCTTC	NA	False	NA	0	True	NA	NA	NA	149978604	149956326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961400_149961549_149961744_149961872_149978487
ES.20278.5	chr2	-	3966	3	FSM	ENSMUSG00000068134.14	ENSMUST00000109931.8	4033	3	-3	70	-3	-70	multi-exon	FALSE	canonical	3	13	junction_1	23.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACCTTCAAGCTGTCTC	NA	False	NA	-69	True	AATAAA	-22	NA	149978601	149956395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961744_149961872_149978487
ES.20278.6	chr2	-	2479	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	-140	1788	-140	962	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGTACTTAGGACAAGTT	NA	False	NA	NA	False	NA	NA	NA	149978768	149958113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ES.20278.7	chr2	-	3690	3	FSM	ENSMUSG00000068134.14	ENSMUST00000142792.2	529	3	-39	-3122	13	962	multi-exon	FALSE	canonical	3	47	junction_1	6.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGTACTTAGGACAAGTT	NA	False	NA	NA	False	NA	NA	NA	149978615	149958113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149961549_149961744_149961872_149978487
ES.20278.8	chr2	-	1370	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	37	2720	7	30	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCGTCTTTGAATACAT	NA	False	NA	NA	False	NA	NA	NA	149978591	149959045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ES.20279.1	chr2	+	177	1	Intergenic	novelGene_16761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGACACTGATATT	NA	False	NA	NA	False	NA	NA	NA	150020120	150020297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150020100_150020300
ES.2028.1	chr1	+	3373	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTCCAGCTTCCTG	5145	False	NA	NA	False	NA	NA	NA	179673561	179676934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179673600_179676900
ES.2028.2	chr1	+	1396	2	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGGTGAGTGTGACTT	5177	False	NA	NA	False	NA	NA	NA	179673593	179677327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179673870_179676207
ES.20280.1	chr2	+	2025	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	2	-299	2	299	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAGGCAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	150023676	150035498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ES.20280.10	chr2	+	3001	4	NNC	ENSMUSG00000079009.9	novel	1728	4	NA	NA	-1	3238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.1448954015034	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAATGCCTCATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	150032311	150038437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150032440_150032638_150032700_150033775_150035207_150037056
ES.20280.11	chr2	+	6958	1	Intergenic	novelGene_16762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAATTGGTCACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	150036148	150043106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150036100_150043100
ES.20280.12	chr2	+	5405	1	Intergenic	novelGene_16763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCATAAATTGTCATT	NA	False	NA	8	True	NA	NA	NA	150041685	150047090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150041700_150047100
ES.20280.13	chr2	+	2818	6	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	-24	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	10.1390334845093	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	150059968	150082644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150062250_150062333_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.14	chr2	+	4000	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	5	-1208	5	1208	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCGAAGTTTTATCATA	NA	False	NA	NA	False	NA	NA	NA	150059997	150083853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ES.20280.15	chr2	+	3147	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	11	-361	11	361	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTAAAGTTAAAGCAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	150060003	150083006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ES.20280.16	chr2	+	2711	5	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	11	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10.5948100502085	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150060003	150082654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.17	chr2	+	2786	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	24	-13	24	13	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAGAAAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	150060016	150082658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ES.20280.18	chr2	+	4042	4	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	25	1221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.4406682011537	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATATGAGCCACTGCGT	NA	False	NA	NA	False	NA	NA	NA	150060017	150083866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150078611_150078739_150078948_150079059_150080162
ES.20280.19	chr2	+	2514	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	29	254	29	-254	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTTTATGTTTCTGTA	NA	False	NA	NA	False	AATATA	-14	NA	150060021	150082391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ES.20280.2	chr2	+	723	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	5	1000	5	-873	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGACATACTGGAGA	NA	False	NA	NA	False	NA	NA	NA	150023679	150034199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ES.20280.20	chr2	+	565	4	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	34	-13315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.71404520791032	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTATGTGTCATAATC	NA	False	NA	NA	False	ATTAAA	-16	NA	150060026	150069330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150062250_150062333_150063708_150063866_150069096
ES.20280.21	chr2	+	3112	8	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	55	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.9339389246585	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAGAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	150060047	150082614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150062250_150062333_150063708_150064029_150069784_150069868_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.22	chr2	+	2326	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	55	416	55	-416	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTGATGTGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	150060047	150082229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ES.20280.23	chr2	+	3818	4	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	56	7	intron_retention	TRUE	non_canonical	0	0	junction_3	11.4406682011537	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150060048	150082652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150078611_150078739_150078948_150080945_150081027
ES.20280.24	chr2	+	3042	7	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	56	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.4951680670136	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150060048	150082653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150062250_150062333_150063733_150064029_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.25	chr2	+	6830	7	Fusion	ENSMUSG00000060336.7_ENSMUSG00000079008.3	novel	2797	4	NA	NA	58	2844	multi-exon	FALSE	canonical	0	0	junction_3	13.9044357430761	112	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCGTGTGTTTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	150060050	150115064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_150060119_150078611_150078739_150078948_150079010_150098612_150099437_150108044_150108172_150108370_150108432_150109502
ES.20280.26	chr2	+	2688	7	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	67	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.8039541397505	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATAACGCTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	150060059	150082309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150063733_150064029_150069784_150069868_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.27	chr2	+	2776	7	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	73	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.1005505368978	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150060065	150082616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150060119_150062250_150062333_150069784_150069868_150078611_150078739_150078948_150079010_150080162_150080906_150080989
ES.20280.28	chr2	+	3630	3	NNC	ENSMUSG00000060336.7	novel	2797	4	NA	NA	18730	1	intron_retention	FALSE	non_canonical	0	0	junction_2	14	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	150078722	150082646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150078739_150078948_150080906_150080989
ES.20280.3	chr2	+	2995	5	NNC	ENSMUSG00000079009.9	novel	1728	4	NA	NA	5	3235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0746772020624	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACATTAAATGCCTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	150023679	150038434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775_150035112_150037074
ES.20280.30	chr2	+	6136	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	-2	-3116	-2	3116	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTGTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	150099434	150115336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
ES.20280.31	chr2	+	1176	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	-2	24262	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.216020874544	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGAATTGGCTCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	150099434	150136482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150135188_150135267_150135686
ES.20280.32	chr2	+	3799	1	Genic_Genomic	ENSMUSG00000079008.3	novel	NA	NA	NA	NA	-2	-8987	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATTGTTGATACGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	150099434	150103233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_150099400_150103200
ES.20280.33	chr2	+	5856	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	0	-2838	0	2838	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTAAATGCCTCGTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	150099436	150115058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
ES.20280.34	chr2	+	652	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	0	23740	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.216020874544	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTTGAGACTATTCA	NA	False	NA	NA	False	AATAAA	-10	NA	150099436	150135960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150135188_150135267_150135686
ES.20280.35	chr2	+	6865	3	ISM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	2	-2778	2	2778	intron_retention	FALSE	canonical	3	38	junction_2	8.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTATGTTGTCAACA	NA	False	NA	NA	False	ATTAAA	-21	NA	150099438	150114998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150099549_150108044_150108172_150108370
ES.20280.36	chr2	+	6322	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	11	-3315	11	3315	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATATCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	150099447	150115535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
ES.20280.37	chr2	+	5515	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	11	-2508	11	2508	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGGTATGTATTCATGT	NA	False	NA	NA	False	NA	NA	NA	150099447	150114728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
ES.20280.38	chr2	+	4436	7	Fusion	ENSMUSG00000079008.3_ENSMUSG00000095315.3	novel	3018	4	NA	NA	15	2029	multi-exon	FALSE	non_canonical	0	0	junction_3	53.4810454481045	204	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGTGTCCTGTGGTATG	NA	False	NA	10	True	NA	NA	NA	150099451	150170961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_150099549_150108044_150108172_150108370_150108432_150149486_150149578_150165621_150165749_150165947_150166009_150167089
ES.20280.39	chr2	+	649	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	15	23740	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	21.5986110664552	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTTGAGACTATTCA	NA	False	NA	NA	False	AATAAA	-10	NA	150099451	150135960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150135176_150135267_150135686
ES.20280.4	chr2	+	4961	4	FSM	ENSMUSG00000079009.9	ENSMUST00000109926.8	1728	4	5	-3238	5	3238	multi-exon	FALSE	canonical	3	34	junction_3	16.0485374896143	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAATGCCTCATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	150023679	150038437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775
ES.20280.40	chr2	+	5635	5	NNC	ENSMUSG00000079008.3	novel	3018	4	NA	NA	33	3114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.3776838723148	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	150099469	150115334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502_150114149_150114612
ES.20280.41	chr2	+	7889	1	Genic_Genomic	ENSMUSG00000079008.3	novel	NA	NA	NA	NA	11736	6841	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGACAATTTTCTAGACA	3572	False	NA	NA	False	NA	NA	NA	150111172	150119061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_150111200_150119100
ES.20280.42	chr2	+	5956	1	Intergenic	novelGene_16765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTCCATGAGTATATT	6941	False	NA	NA	False	NA	NA	NA	150114541	150120497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150114500_150120500
ES.20280.43	chr2	+	179	1	Intergenic	novelGene_16766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATATCT	NA	False	NA	NA	False	NA	NA	NA	150136864	150137043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150136900_150137000
ES.20280.44	chr2	+	174	1	Intergenic	novelGene_16767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAACCTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	150137408	150137582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150137400_150137600
ES.20280.45	chr2	+	4464	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	-275	-2030	-275	2030	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTCCTGTGGTATGT	NA	False	NA	11	True	NA	NA	NA	150153075	150170962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.46	chr2	+	665	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	6	1488	6	-1488	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCATGAGTGTAATCA	NA	False	NA	NA	False	NA	NA	NA	150153356	150167444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.47	chr2	+	2054	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	7	-37	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	150153357	150168895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150153479_150165621_150165749_150167089
ES.20280.48	chr2	+	4147	4	NNC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	9	2024	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	53.766986979827	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGGAGGTGTCCTGTG	NA	False	NA	5	True	NA	NA	NA	150153359	150170956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150153479_150165648_150165749_150165947_150166009_150167089
ES.20280.49	chr2	+	2084	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	38	37	38	-37	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	150153388	150168895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.5	chr2	+	3375	5	NNC	ENSMUSG00000079009.9	novel	1728	4	NA	NA	14	3511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0746772020624	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	150023688	150038710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775_150035207_150037056
ES.20280.50	chr2	+	6990	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	40	-4871	40	4871	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTCTGATCTGATTGT	NA	False	NA	NA	False	AGTAAA	-25	NA	150153390	150173803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.51	chr2	+	2298	5	NNC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.414187101911	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACATTTTGGGGAGCA	NA	False	NA	NA	False	AATAAA	-18	NA	150153390	150168930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150153479_150156308_150156490_150165621_150165749_150165947_150166009_150167089
ES.20280.52	chr2	+	5209	3	ISM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	57	-2026	57	2026	intron_retention	FALSE	canonical	3	131	junction_1	2	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGGAGGTGTCCTGTGGT	NA	False	NA	7	True	NA	NA	NA	150153407	150170958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150153479_150165621_150165749_150165947
ES.20280.53	chr2	+	4069	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	57	2028	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGTGTCCTGTGGTAT	NA	False	NA	9	True	NA	NA	NA	150153407	150170960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150153479_150165621_150165749_150167089
ES.20280.54	chr2	+	5065	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	61	-2967	61	2967	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGCATGTGTCTTTT	NA	False	NA	NA	False	AATACA	-15	NA	150153411	150171899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.55	chr2	+	4189	5	NNC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	65	2023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.414187101911	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGAGGAGGTGTCCTGT	NA	False	NA	4	True	NA	NA	NA	150153415	150170955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150153479_150156308_150156381_150165621_150165749_150165947_150166009_150167089
ES.20280.56	chr2	+	3130	3	ISM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	73	37	73	-37	intron_retention	FALSE	canonical	3	131	junction_1	2	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	150153423	150168895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150153479_150165621_150165749_150165947
ES.20280.57	chr2	+	3939	5	NNC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	75	2023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.9056647611698	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGAGGAGGTGTCCTGT	NA	False	NA	4	True	NA	NA	NA	150153425	150170955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150153479_150165648_150165749_150165947_150166009_150167089_150168176_150168316
ES.20280.59	chr2	+	3187	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	98	-1126	98	1126	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	150153448	150170058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ES.20280.6	chr2	+	2967	6	Fusion	ENSMUSG00000060336.7_ENSMUSG00000079009.9	novel	1728	4	NA	NA	25	17	multi-exon	FALSE	canonical	3	7	junction_3	24.694938752708	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAAAAACCACTGGG	NA	False	NA	NA	False	NA	NA	NA	150023699	150082662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_150023791_150032312_150032440_150032638_150032700_150078611_150078739_150078948_150079010_150080162
ES.20280.60	chr2	+	181	1	ISM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	14078	1323	1807	-1323	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTTTGAATGTAACCA	NA	False	NA	NA	False	NA	NA	NA	150167428	150167609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150167400_150167600
ES.20280.61	chr2	+	5634	1	Intergenic	novelGene_16768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGTGTTGAAGACTAC	NA	False	NA	NA	False	NA	NA	NA	150170659	150176293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150170700_150176300
ES.20280.62	chr2	+	1896	1	Intergenic	novelGene_16769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCATATATATTACTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	150171588	150173484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150171600_150173500
ES.20280.63	chr2	+	4106	1	Intergenic	novelGene_16770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	150171738	150175844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150171700_150175800
ES.20280.64	chr2	+	1659	2	Intergenic	novelGene_16771	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTAATTAGGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	150174802	150176506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150176309_150176353
ES.20280.7	chr2	+	4259	7	Fusion	ENSMUSG00000060336.7_ENSMUSG00000079009.9	novel	1728	4	NA	NA	29	1230	multi-exon	FALSE	canonical	0	0	junction_3	27.4028587316482	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGCGTCATAATATC	NA	False	NA	NA	False	NA	NA	NA	150023703	150083875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_150023791_150032312_150032440_150032638_150032700_150069784_150069868_150078611_150078739_150078948_150079010_150080162
ES.20280.8	chr2	+	4162	6	Fusion	ENSMUSG00000060336.7_ENSMUSG00000079009.9	novel	1728	4	NA	NA	30	1217	multi-exon	FALSE	canonical	3	7	junction_3	24.694938752708	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATCATATGAGCCACT	NA	False	NA	NA	False	NA	NA	NA	150023704	150083862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_150023791_150032312_150032440_150032638_150032700_150078611_150078739_150078948_150079010_150080162
ES.20280.9	chr2	+	3246	5	NNC	ENSMUSG00000079009.9	novel	1728	4	NA	NA	42	3513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0746772020624	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	150023716	150038712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150023791_150032312_150032440_150032638_150032700_150033775_150035104_150037056
ES.20281.1	chr2	+	212	1	Intergenic	novelGene_16772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAGAAAACCGGATCT	NA	False	NA	66	True	NA	NA	NA	150203563	150203775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150203600_150203800
ES.20282.1	chr2	-	673	2	Intergenic	novelGene_16764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCCTTAATGTCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	150088755	150088037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150088192_150088236
ES.20283.1	chr2	-	4128	3	NNC	ENSMUSG00000063364.11	novel	650	4	NA	NA	5	-13650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCACTTTGCAGTCCC	NA	False	NA	NA	False	NA	NA	NA	150204648	150166506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150170367_150186499_150186627_150204507
ES.20283.10	chr2	-	2592	5	NNC	ENSMUSG00000063364.11	novel	745	5	NA	NA	1	2023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.03118920210451	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCTTTTTATGTTTC	NA	False	NA	NA	False	AATATA	-10	NA	150204652	150182732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150184799_150184882_150185076_150186228_150186290_150186499_150186627_150204507
ES.20283.11	chr2	-	2598	3	NIC	ENSMUSG00000063364.11	novel	745	5	NA	NA	-26	1947	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAACGATTTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	150204711	150182808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150185076_150186499_150186627_150204507
ES.20283.12	chr2	-	2048	1	Intergenic	novelGene_16773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAATGAATT	NA	False	NA	NA	False	NA	NA	NA	150230906	150228858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150228900_150230900
ES.20283.13	chr2	-	7903	6	Fusion	ENSMUSG00000074731.4_ENSMUSG00000068130.12	novel	2922	4	NA	NA	-11	4755	intron_retention	FALSE	canonical	1	2	junction_3	13.8996402831152	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCATTTTTGTTGCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	150327022	150244305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_150251710_150252860_150252922_150253130_150253258_150316415_150316477_150316675_150316803_150326899
ES.20283.14	chr2	-	7592	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-11	-4659	-11	4659	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCCTTGGTCATGGCA	NA	False	NA	NA	False	NA	NA	NA	150293417	150244401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.15	chr2	-	2559	1	Intergenic	novelGene_16774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGATGGTTTGATCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	150247394	150244835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150244800_150247400
ES.20283.16	chr2	-	7094	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-50	-4122	-50	4122	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATCGCAAATTTTAAA	NA	False	NA	NA	False	AATAAA	-29	NA	150293456	150244938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.17	chr2	-	6373	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	23	-3474	23	3474	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGTCGTCTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	150293383	150245586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.18	chr2	-	5992	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-28	-3042	-28	3042	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACATGGAAGTATAAGCT	NA	False	NA	NA	False	NA	NA	NA	150293434	150246018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.19	chr2	-	5448	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-1	-2525	-1	2525	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGATGTGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	150293407	150246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.2	chr2	-	3262	5	NNC	ENSMUSG00000063364.11	novel	745	5	NA	NA	7	-14682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.57535900110278	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAAGGTTTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	150204646	150167538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150170367_150184953_150185076_150186228_150186290_150186499_150186627_150204522
ES.20283.20	chr2	-	3257	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	15	-350	15	350	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTAAAGTTAAAGCAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	150293391	150248710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.21	chr2	-	4779	4	NNC	ENSMUSG00000068130.12	novel	2922	4	NA	NA	1783	-226	intron_retention	FALSE	canonical	0	0	junction_3	6.12825877028341	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGTAGTAAAACACT	NA	False	NA	NA	False	AATATA	-20	NA	150291623	150249286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150251710_150252860_150252922_150253130_150253258_150289455
ES.20283.22	chr2	-	2541	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	-43	424	-43	412	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGATGTGATGTGCCTC	NA	False	NA	NA	False	AAAAAG	-28	NA	150293449	150249484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ES.20283.23	chr2	-	3537	1	Genic_Genomic	ENSMUSG00000082740.2	novel	NA	NA	NA	NA	30	2812	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAATATCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	150312055	150308518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_150308500_150312100
ES.20283.24	chr2	-	3776	5	NNC	ENSMUSG00000074731.4	novel	2734	4	NA	NA	10	3952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.972892172189	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGCATTTTCATGTAC	NA	False	NA	NA	False	ATTAAA	-42	NA	150327001	150308958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150310346_150313245_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.25	chr2	-	3390	5	NNC	ENSMUSG00000074731.4	novel	2734	4	NA	NA	5	3923	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.972892172189	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAACATTAAATGCCTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	150327006	150308987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150310346_150313607_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.27	chr2	-	6635	4	FSM	ENSMUSG00000082740.2_ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	21	-3922	21	2342	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAACATTAAATGCCTC	NA	False	NA	NA	False	ATTAAA	-12	NA	150326990	150308988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.28	chr2	-	3160	5	NNC	ENSMUSG00000074731.4	novel	2734	4	NA	NA	11	3922	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.972892172189	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAACATTAAATGCCTC	NA	False	NA	NA	False	ATTAAA	-12	NA	150327000	150308988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150310331_150313815_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.29	chr2	-	3376	5	NNC	ENSMUSG00000074731.4	novel	2734	4	NA	NA	-34	3865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.972892172189	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGCTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	150327045	150309045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150310352_150313608_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.3	chr2	-	9476	4	NIC	ENSMUSG00000063364.11	novel	745	5	NA	NA	-4	8807	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	3.29983164553722	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTTGAGATATGAA	NA	False	NA	NA	False	NA	NA	NA	150204668	150175948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150185076_150186228_150186290_150186499_150186627_150204507
ES.20283.30	chr2	-	2639	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	21	74	21	-74	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAGGCAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	150326990	150312984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.31	chr2	-	2771	1	NIC	ENSMUSG00000074731.4	novel	2734	4	NA	NA	11256	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAGGCAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	150315755	150312984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150313000_150315800
ES.20283.32	chr2	-	2342	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	-2	394	-2	-394	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGGGGCAGTCATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	150327013	150313304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ES.20283.4	chr2	-	8188	4	NIC	ENSMUSG00000063364.11	novel	745	5	NA	NA	-8	7494	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	3.29983164553722	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATCATATGAGCCACT	NA	False	NA	NA	False	NA	NA	NA	150204693	150177261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150185076_150186228_150186290_150186499_150186627_150204507
ES.20283.5	chr2	-	8296	6	Fusion	ENSMUSG00000068130.12_ENSMUSG00000063364.11	novel	745	5	NA	NA	-30	7485	multi-exon	FALSE	canonical	0	0	junction_3	7.57363849150459	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGAAGTATTATCATA	NA	False	NA	NA	False	NA	NA	NA	150293436	150177270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_150185076_150186228_150186290_150186499_150186627_150252860_150252922_150253130_150253258_150293321
ES.20283.6	chr2	-	5505	5	FSM	ENSMUSG00000063364.11	ENSMUST00000152036.8	745	5	-1	-4759	1	4759	multi-exon	FALSE	canonical	0	0	junction_4	9.3407708461347	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTGTTTCAAGTT	NA	False	NA	NA	False	NA	NA	NA	150204663	150179996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150185076_150186228_150186290_150186499_150186627_150202030_150202113_150204507
ES.20283.7	chr2	-	5439	4	NIC	ENSMUSG00000063364.11	novel	745	5	NA	NA	1	4754	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	3.29983164553722	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGATGTGTTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	150204684	150180001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150185076_150186228_150186290_150186499_150186627_150204507
ES.20283.8	chr2	-	4408	5	NNC	ENSMUSG00000063364.11	novel	745	5	NA	NA	-2	3851	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.57535900110278	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTTGATTGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	150204655	150180904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150184799_150184882_150185076_150186228_150186290_150186499_150186627_150204522
ES.20283.9	chr2	-	3569	5	NNC	ENSMUSG00000063364.11	novel	745	5	NA	NA	-2	2997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.03118920210451	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGAGCTCTGCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	150204655	150181758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150184799_150184882_150185076_150186228_150186290_150186499_150186627_150204507
ES.20284.1	chr2	-	2229	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	7	-1	7	1	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCTGATTATTACTC	1006	False	NA	NA	False	AATAAA	-16	NA	150450480	150424998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ES.20284.2	chr2	-	2312	10	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	33.5227948980657	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGCTGATTATTAC	1011	False	NA	NA	False	AATAAA	-14	NA	150450475	150425000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150441647_150441738_150442163_150442281_150450307
ES.20284.3	chr2	-	2207	9	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.6479341607472	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGCTGATTATTAC	1020	False	NA	NA	False	AATAAA	-14	NA	150450466	150425000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150426109_150427682_150427876_150428300_150428426_150428907_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ES.20284.4	chr2	-	5417	10	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.5305788809963	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGCTGATTATTAC	1011	False	NA	NA	False	AATAAA	-14	NA	150450475	150425000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150435151_150436221_150436338_150441647_150441738_150442163_150442281_150450307
ES.20284.6	chr2	-	5380	9	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.8943844784422	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTCTGCTGATTATT	1059	False	NA	NA	False	AATAAA	-12	NA	150450427	150425002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150431043_150431952_150435151_150436221_150436338_150442163_150442281_150450307
ES.20284.7	chr2	-	2101	8	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	10	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	31.3674730787633	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCACTTTTCTGCTGAT	1009	False	NA	NA	False	AATAAA	-8	NA	150450477	150425006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ES.20284.8	chr2	-	2467	11	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.5549034411103	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCACTTTTCTGCTGAT	1054	False	NA	NA	False	AATAAA	-8	NA	150450432	150425006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150434946_150435151_150436221_150436338_150441647_150441738_150442163_150442281_150450307
ES.20285.1	chr2	+	253	1	Intergenic	novelGene_16775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCATATCAGACCCA	NA	False	NA	NA	False	NA	NA	NA	150474316	150474569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150474300_150474600
ES.20286.1	chr2	-	3117	15	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7989	2386	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	73.5135694818255	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCAGCTTCCTCTATTC	NA	False	NA	NA	False	NA	NA	NA	150502145	150457638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150458500_150461144_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471646_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
ES.20286.10	chr2	-	4681	13	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	1	-6	intron_retention	FALSE	canonical	3	167	junction_12	11.8142451679694	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510133	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.11	chr2	-	3640	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.6901327381272	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510182	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480484_150484631_150484832_150501755_150501853_150509804
ES.20286.13	chr2	-	3584	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.1371285580229	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510132	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463571_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.15	chr2	-	4223	13	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-8	-7	intron_retention	FALSE	canonical	3	167	junction_12	15.0966791786214	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGGGGATGTTTTT	NA	False	NA	-12	True	AATAAA	-20	NA	150510142	150460031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.17	chr2	-	3385	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7969	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	51.4250186619188	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTATGGGGATGTTTT	NA	False	NA	-13	True	AATAAA	-19	NA	150502165	150460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502016
ES.20286.18	chr2	-	6535	13	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7988	-8	intron_retention	FALSE	canonical	1	2	junction_7	64.99289491082	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTATGGGGATGTTTT	NA	False	NA	-13	True	AATAAA	-19	NA	150502146	150460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471646_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
ES.20286.2	chr2	-	3654	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	-33	-3	-33	3	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTTGGTTGACGTT	NA	False	NA	-2	True	AATAAA	-30	NA	150510211	150460021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.20	chr2	-	5837	9	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-13	-8	intron_retention	FALSE	canonical	1	1	junction_7	77.1925352608657	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTATGGGGATGTTTT	5041	False	NA	-13	True	AATAAA	-19	NA	150480048	150460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150479766_150479920_150479992
ES.20286.21	chr2	-	6073	9	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-28	-8	intron_retention	FALSE	canonical	3	171	junction_5	13.9351175093718	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTATGGGGATGTTTT	5026	False	NA	-13	True	AATAAA	-19	NA	150480063	150460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766
ES.20286.22	chr2	-	3021	12	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-4696	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.9988193500099	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTATGGGGATGTTTT	358	False	NA	-13	True	AATAAA	-19	NA	150484731	150460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467020_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631
ES.20286.23	chr2	-	2555	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	37	1026	-7	-1026	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTATTACCATTCA	NA	False	NA	NA	False	NA	NA	NA	150510141	150461050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.24	chr2	-	6113	5	ISM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	9	14620	9	-4143	5prime_fragment	FALSE	canonical	3	167	junction_4	12.9301005409857	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	150510169	150474644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.25	chr2	-	1979	1	Intergenic	novelGene_16776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACTCCAACAGGGAAAAA	8333	False	NA	NA	False	NA	NA	NA	150476756	150474777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150474800_150476800
ES.20286.4	chr2	-	4245	13	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_3	53.5435310959431	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGATGTTTTTGGTTGA	NA	False	NA	-6	True	AATAAA	-26	NA	150510132	150460025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466809_150466909_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20286.6	chr2	-	3358	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	7987	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	46.5577201092917	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGATGTTTTTGGTTGA	NA	False	NA	-6	True	AATAAA	-26	NA	150502147	150460025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150502032
ES.20286.7	chr2	-	3461	13	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	53.7886811719921	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510124	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150509804
ES.20286.8	chr2	-	2864	11	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	-56	-6	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	53.8924855615326	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	4998	False	NA	-11	True	AATAAA	-21	NA	150480091	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150479992
ES.20286.9	chr2	-	3572	14	NNC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.5702239312242	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGGGGATGTTTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	150510119	150460030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471646_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ES.20287.1	chr2	-	4661	4	ISM	ENSMUSG00000033080.10	ENSMUST00000046095.10	3791	5	125	1294	125	-1294	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACTTCCTGGCCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	150531155	150523915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_150525187_150526330_150526509_150527513_150527638_150528067
ES.20287.2	chr2	-	2751	5	FSM	ENSMUSG00000033080.10	ENSMUST00000046095.10	3791	5	-254	1294	-254	-1294	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACTTCCTGGCCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	150531534	150523915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150525187_150526330_150526509_150527513_150527638_150528067_150528147_150530435
ES.20288.1	chr2	-	5213	1	Genic_Genomic	ENSMUSG00000086563.2	novel	NA	NA	NA	NA	-32	2840	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548828	150543615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_150543600_150548800
ES.20288.2	chr2	-	4810	2	NIC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-32	2840	intron_retention	FALSE	canonical	3	31	junction_1	0	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548828	150543615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150548201_150548603
ES.20288.3	chr2	-	5165	2	NNC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-31	2840	intron_retention	TRUE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548827	150543615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150548359_150548405
ES.20288.4	chr2	-	4470	2	NNC	ENSMUSG00000086563.2	novel	768	3	NA	NA	-32	2812	intron_retention	FALSE	canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150548828	150543643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150544440_150545154
ES.20289.1	chr2	-	5530	3	Intergenic	novelGene_16777	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	150576490	150570459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150572888_150573295_150573387_150573479
ES.2029.1	chr1	+	164	1	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATATTAT	1523	False	NA	NA	False	NA	NA	NA	179678792	179678956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179678800_179679000
ES.20290.1	chr2	+	3365	1	NIC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	6	-812	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGAGTGCGTGATTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	150590967	150594332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150591000_150594300
ES.20290.10	chr2	+	4697	12	NIC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	112	junction_1	19.2392505137435	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	False	NA	12	True	AATAAA	-17	NA	150591012	150613595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.11	chr2	+	2537	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	54.753346875628	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCTTTTGCCTCATT	NA	False	NA	8	True	AATAAA	-13	NA	150591022	150613591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150591154_150594932_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612483
ES.20290.12	chr2	+	4042	12	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	3942	-3	intron_retention	FALSE	canonical	1	1	junction_5	48.18953626005	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTGCCTCATTA	NA	False	NA	9	True	AATAAA	-14	NA	150595032	150613592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604263_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150610842_150612211_150612325_150612548
ES.20290.13	chr2	+	4899	13	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	4012	1637	intron_retention	FALSE	canonical	0	0	junction_12	46.0225639104221	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTTTAGGATCTTTA	NA	False	NA	NA	False	NA	NA	NA	150595102	150615232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150612325_150612548_150614246_150614528
ES.20290.14	chr2	+	2970	2	Genic_Genomic	ENSMUSG00000033068.17	novel	2540	14	NA	NA	4704	3814	multi-exon	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGCATTTAGACGTCT	NA	False	NA	NA	False	NA	NA	NA	150595794	150598958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_150597272_150597465
ES.20290.15	chr2	+	2360	8	ISM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	12663	2	12534	-2	3prime_fragment	FALSE	canonical	3	128	junction_3	14.8681278071516	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150603624	150613593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.16	chr2	+	1458	5	ISM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	16407	0	16278	0	3prime_fragment	FALSE	canonical	3	144	junction_2	10.9658560997307	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	False	NA	12	True	AATAAA	-17	NA	150607368	150613595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.2	chr2	+	2533	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	7	0	7	0	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	False	NA	12	True	AATAAA	-17	NA	150590968	150613595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.4	chr2	+	2455	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.601058707948	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150590976	150613593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150591086_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.5	chr2	+	4552	13	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	2	junction_6	59.9747632110559	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150590992	150613593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150603416_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612483
ES.20290.6	chr2	+	3789	16	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	0	2321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	64.9706258413925	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	150591000	150615916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604263_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548_150614246_150614528_150614627_150615408
ES.20290.8	chr2	+	2647	15	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.0658856596693	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTTGCCTCATTAG	NA	False	NA	10	True	AATAAA	-15	NA	150591005	150613593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150591154_150592644_150592798_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20290.9	chr2	+	2455	13	NIC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.8365953786851	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCTTTTGCCTCATT	NA	False	NA	8	True	AATAAA	-13	NA	150591006	150613591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ES.20291.1	chr2	+	3916	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	-2	-5	-2	5	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTGCATTTCCACCATG	NA	False	NA	28	True	ATTAAA	-28	NA	150628652	150673683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.10	chr2	+	3297	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	29	583	29	541	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGGGTTGGTTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	150628683	150673095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.11	chr2	+	2011	15	NNC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	29	-4904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.4711603750985	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAATAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	150628683	150665489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665350
ES.20291.12	chr2	+	3857	20	NNC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	29	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.4579217098515	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGTCACTGTGGTAT	NA	False	NA	12	True	ATTAAA	-12	NA	150628683	150673667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653290_150655306_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.13	chr2	+	3599	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	35	275	35	-275	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTGCACTGCTCTAT	NA	False	NA	NA	False	CATAAA	-21	NA	150628689	150673403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.15	chr2	+	3339	17	NNC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	-6528	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	39.1583324466198	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGTCACTGTGGTA	NA	False	NA	11	True	ATTAAA	-11	NA	150650713	150673666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668252_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.16	chr2	+	3388	17	NNC	ENSMUSG00000033059.8	novel	808	4	NA	NA	-6183	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.2808397949942	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGTCACTGTGGTA	NA	False	NA	11	True	ATTAAA	-11	NA	150651058	150673666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150651211_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.17	chr2	+	2638	12	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	28529	493	-58	-493	3prime_fragment	FALSE	canonical	3	120	junction_2	17.093810198649	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGAACTTGGTCAGT	NA	False	NA	NA	False	NA	NA	NA	150657183	150673185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.18	chr2	+	4759	1	Genic_Genomic	ENSMUSG00000033059.8	novel	NA	NA	NA	NA	2407	3795	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTAAGATGTCAATCT	5311	False	NA	NA	False	NA	NA	NA	150672714	150677473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_150672700_150677500
ES.20291.4	chr2	+	3418	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	25	466	25	-466	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTAGGCTGACGACT	NA	False	NA	NA	False	AGTAAA	-25	NA	150628679	150673212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.5	chr2	+	4615	19	NIC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	27	-8	intron_retention	FALSE	canonical	3	126	junction_7	15.3767501262277	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCACTGTGGTATCTG	NA	False	NA	15	True	ATTAAA	-15	NA	150628681	150673670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.7	chr2	+	593	2	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	28	29976	28	-12219	5prime_fragment	FALSE	canonical	3	128	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGACTGGTTTGAGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	150628682	150643702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150629031_150643457
ES.20291.8	chr2	+	4358	19	NIC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	28	-11	intron_retention	FALSE	canonical	3	120	junction_9	16.4129766486502	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGTCACTGTGGTAT	NA	False	NA	12	True	ATTAAA	-12	NA	150628682	150673667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20291.9	chr2	+	3771	19	NIC	ENSMUSG00000033059.8	novel	3909	20	NA	NA	28	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	37.9109173500324	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCACTGTGGTATCTG	NA	False	NA	15	True	ATTAAA	-15	NA	150628682	150673670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ES.20292.1	chr2	+	3448	1	Intergenic	novelGene_16781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACTTCTCCAGTCTGTG	NA	False	NA	NA	False	AAAACA	-4	NA	150735742	150739190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150735700_150739200
ES.20293.1	chr2	-	176	1	Intergenic	novelGene_16778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCAGAAAAGAATC	5833	False	NA	NA	False	NA	NA	NA	150602698	150602522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150602500_150602700
ES.20293.10	chr2	-	1805	13	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	26	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.8264158934782	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGTTTTCTCTACAA	NA	False	NA	-26	True	AATAAA	-17	NA	150746625	150674433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150674943_150676217_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.12	chr2	-	1860	12	NIC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	88.4903692756757	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTTTTCTCTACA	NA	False	NA	-27	True	AATAAA	-16	NA	150746650	150674434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150700279_150700405_150746276
ES.20293.13	chr2	-	1826	14	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.5693700489192	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTGTTTTCTCTACA	NA	False	NA	-27	True	AATAAA	-16	NA	150746622	150674434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150674916_150675027_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.15	chr2	-	1583	14	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.5693700489192	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATTGTTTTCTCTA	NA	False	NA	-29	True	AATAAA	-14	NA	150746632	150674436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150674494_150674856_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.17	chr2	-	4773	12	NIC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	14	0	intron_retention	FALSE	canonical	2	181	junction_4	36.3704539063698	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATTGTTTTCTCTA	NA	False	NA	-29	True	AATAAA	-14	NA	150746637	150674436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.18	chr2	-	1070	10	NNC	ENSMUSG00000032046.16	novel	597	5	NA	NA	-12	480	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	92.7134174635893	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTCATTAAAAGGGAACA	NA	False	NA	NA	False	AATGAA	-2	NA	150746594	150678798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150678806_150680165_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.19	chr2	-	1671	1	NIC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	1757	-1733	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	150691653	150689982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150690000_150691700
ES.20293.2	chr2	-	178	2	Antisense	novelGene_ENSMUSG00000087887.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCAGAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	150730773	150602522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_150602541_150730613
ES.20293.20	chr2	-	3480	3	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	22	-28507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATGTGGACTGTGACTA	NA	False	NA	NA	False	AATAAA	-13	NA	150746629	150716756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150719820_150724421_150724486_150746276
ES.20293.21	chr2	-	180	1	Intergenic	novelGene_16780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	150730774	150730594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150730600_150730800
ES.20293.3	chr2	-	176	1	Intergenic	novelGene_16779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAACAAAAG	5784	False	NA	NA	False	NA	NA	NA	150632317	150632141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150632100_150632300
ES.20293.4	chr2	-	1644	1	Antisense	novelGene_ENSMUSG00000033059.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGTGGGCTTGTGTGAC	5999	False	NA	NA	False	CATAAA	-23	NA	150662228	150660584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_150660600_150662200
ES.20293.5	chr2	-	3968	12	NIC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	18	-3	intron_retention	FALSE	canonical	2	181	junction_3	36.581845291875	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGGAATCAGAGTTTC	NA	False	NA	-8	True	AATAAA	-35	NA	150746633	150674415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150675061_150676198_150676327_150677192_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.6	chr2	-	2000	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	-4	3	-4	-3	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGGAATCAGAGTTTC	NA	False	NA	-8	True	AATAAA	-35	NA	150746665	150674415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.7	chr2	-	1866	11	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	85.6268649431941	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGGAATCAGAGTTTC	NA	False	NA	-8	True	AATAAA	-35	NA	150746594	150674415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150688149_150688284_150690271_150690378_150700279_150700405_150746276
ES.20293.9	chr2	-	4823	11	NIC	ENSMUSG00000032046.16	novel	1969	13	NA	NA	25	3	intron_retention	FALSE	canonical	3	259	junction_3	22.1936927977297	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGTTTTCTCTACAA	NA	False	NA	-26	True	AATAAA	-17	NA	150746626	150674433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150675061_150676198_150676327_150677192_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ES.20294.1	chr2	+	1139	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-32	-20	-32	20	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGGTTGTTTTTGGTA	2390	False	NA	43	True	NA	NA	NA	150751481	150773220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ES.20294.10	chr2	+	3014	1	NIC	ENSMUSG00000027454.11	novel	339	5	NA	NA	-1147	-11218	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACCTGGACTATAATAAA	4500	False	NA	NA	False	NA	NA	NA	150753591	150756605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150753600_150756600
ES.20294.11	chr2	+	174	1	Intergenic	novelGene_16782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAACAAATTAT	4885	False	NA	NA	False	NA	NA	NA	150753976	150754150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150754000_150754200
ES.20294.12	chr2	+	2732	3	ISM	ENSMUSG00000027454.11	ENSMUST00000123217.2	602	5	1426	1013	1426	435	internal_fragment	FALSE	canonical	3	455	junction_1	5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTGGGAACTTTGGG	7073	False	NA	NA	False	ATTAAA	-12	NA	150756164	150768452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_150758155_150759788_150759880_150767801
ES.20294.2	chr2	+	4385	6	NIC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	-23	-15	intron_retention	FALSE	canonical	3	394	junction_1	27.1248963131659	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTTTTCACAATGGGA	2399	False	NA	8	True	AATAAA	-15	NA	150751490	150773185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150751714_150754700_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ES.20294.3	chr2	+	1817	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	-15	-715	-15	715	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCACCTTGGTTTTGGTT	2407	False	NA	NA	False	NA	NA	NA	150751498	150773915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ES.20294.4	chr2	+	2389	8	NNC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	-6	1420	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	217.236352052462	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATTTAAAAAAA	2416	False	NA	NA	False	AGTAAA	-15	NA	150751507	150770885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150751714_150754700_150754766_150757246_150757384_150758055_150758155_150759788_150759880_150767801_150767919_150769171_150770256_150770295
ES.20294.5	chr2	+	2724	7	NNC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	-6	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	168.712197411911	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTTTTCACAATGG	2416	False	NA	6	True	AATAAA	-13	NA	150751507	150773183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150751714_150754700_150754902_150756543_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ES.20294.6	chr2	+	3139	6	NIC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	-5	4	intron_retention	FALSE	canonical	3	394	junction_1	29.5255821280462	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCTGGTAGCTTATCT	2417	False	NA	27	True	AATAAA	-34	NA	150751508	150773204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150770037_150772760
ES.20294.7	chr2	+	3034	6	NNC	ENSMUSG00000027454.11	novel	1087	7	NA	NA	0	956	intron_retention	TRUE	non_canonical	0	0	junction_5	174.517620886832	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAATGTGTCACATGGC	2422	False	NA	NA	False	NA	NA	NA	150751513	150770421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150770247_150770287
ES.20294.8	chr2	+	2277	5	FSM	ENSMUSG00000027454.11	ENSMUST00000140950.8	648	5	-14	-1615	9	167	multi-exon	FALSE	canonical	3	394	junction_1	29.583568074186	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTCCCTGGAATGAATC	2431	False	NA	NA	False	AATAAA	-42	NA	150751522	150769632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801
ES.20294.9	chr2	+	2353	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	31	-1297	8	1297	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGGCTTTCACCTT	2453	False	NA	NA	False	NA	NA	NA	150751544	150774497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ES.20295.1	chr2	-	4127	1	Antisense	novelGene_ENSMUSG00000027454.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	150758493	150754366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_150754400_150758500
ES.20296.1	chr2	-	2627	14	NNC	ENSMUSG00000068115.14	novel	768	7	NA	NA	-7	17898	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7307275153856	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTGAAATGTAACAAAACA	7578	False	NA	NA	False	NA	NA	NA	150851303	150758540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150758570_150799715_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.10	chr2	-	4994	24	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.495811271655	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTTAAAGTTTTAAA	7612	False	NA	0	True	ATTAAA	-16	NA	150851269	150776440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782639_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.12	chr2	-	7191	23	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	2	-3	intron_retention	FALSE	canonical	1	1	junction_9	14.4654047259072	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTTAAAGTTTTAA	7587	False	NA	-1	True	ATTAAA	-15	NA	150851294	150776441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150794713_150795225_150795333_150797471_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.14	chr2	-	4896	24	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	-8890	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	20.1910534381294	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTTAAAGTTTTAA	532	False	NA	-1	True	ATTAAA	-15	NA	150822024	150776441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797471_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150808243_150808285_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917
ES.20296.16	chr2	-	10650	20	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	22.6411240581151	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTTTTTTAAAGTTTTA	7587	False	NA	-2	True	ATTAAA	-14	NA	150851294	150776442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782590_150786571_150787003_150787109_150791258_150794713_150795225_150795333_150797471_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150851150
ES.20296.19	chr2	-	3935	5	ISM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	66103	6	-2386	-6	3prime_fragment	FALSE	canonical	3	61	junction_3	3.8405728739343	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTTTTTTAAAGTTT	NA	False	NA	-4	True	ATTAAA	-12	NA	150785215	150776444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591
ES.20296.2	chr2	-	5398	8	NNC	ENSMUSG00000068115.14	novel	768	7	NA	NA	948	17888	intron_retention	FALSE	non_canonical	0	0	junction_1	25.1647631843109	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATCTTGAAATG	NA	False	NA	NA	False	NA	NA	NA	150812052	150758550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150758570_150799715_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150808243
ES.20296.20	chr2	-	3127	9	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	289	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.5170717106208	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTTTTTTAAAGTTT	NA	False	NA	-4	True	ATTAAA	-12	NA	150794423	150776444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792722_150794404
ES.20296.3	chr2	-	2021	1	Intergenic	novelGene_16783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCATGGAAGGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	150763686	150761665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150761700_150763700
ES.20296.4	chr2	-	5073	25	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.5902435078843	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTTAAATT	7550	False	NA	2	True	ATTAAA	-18	NA	150851331	150776438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808089_150808243_150808285_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.5	chr2	-	5106	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	-13	0	-13	0	multi-exon	FALSE	canonical	3	41	junction_10	8.5081968705865	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTTAAATT	7550	False	NA	2	True	ATTAAA	-18	NA	150851331	150776438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.7	chr2	-	5032	24	NNC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.5676182317213	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTTAAATT	7588	False	NA	2	True	ATTAAA	-18	NA	150851293	150776438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787099_150791284_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20296.8	chr2	-	4029	23	NIC	ENSMUSG00000068115.14	novel	5093	24	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	13.9923975816386	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTTAAATT	7586	False	NA	2	True	ATTAAA	-18	NA	150851295	150776438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ES.20297.1	chr2	-	3688	2	Intergenic	novelGene_16784	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGTTTATTGCAGTT	6293	False	NA	NA	False	NA	NA	NA	150868781	150862476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150864936_150867552
ES.20297.2	chr2	-	5200	1	Intergenic	novelGene_16785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	5480	False	NA	NA	False	NA	NA	NA	150869594	150864394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150864400_150869600
ES.20297.3	chr2	-	190	1	Intergenic	novelGene_16786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAGAAAAAGAAA	8453	False	NA	NA	False	NA	NA	NA	150866621	150866431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_150866400_150866600
ES.20298.1	chr2	+	3598	1	Antisense	novelGene_ENSMUSG00000053916.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-22	NA	150872037	150875635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_150872000_150875600
ES.20299.1	chr2	-	1368	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	14	12	14	-12	multi-exon	FALSE	canonical	3	184	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTCATCCTTTTA	NA	False	NA	-13	True	ATTAAA	-26	NA	150881304	150871616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_150872837_150881156
ES.20299.2	chr2	-	1570	2	NNC	ENSMUSG00000053916.5	novel	1394	2	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTCATCCTTTTA	NA	False	NA	-13	True	ATTAAA	-26	NA	150881275	150871616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_150872837_150880925
ES.20299.3	chr2	-	3323	1	NIC	ENSMUSG00000053916.5	novel	380	3	NA	NA	368	-4915	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGGAGTTGGCCATAGA	NA	False	NA	NA	False	NA	NA	NA	150880914	150877591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_150877600_150880900
ES.203.1	chr1	+	178	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATGCATG	NA	False	NA	NA	False	NA	NA	NA	25263764	25263942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_25263800_25263900
ES.2030.1	chr1	-	182	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	179685108	179684926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_179684900_179685100
ES.20300.1	chr2	+	1584	1	Intergenic	novelGene_16787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCATAACCTGAGGTAC	NA	False	NA	NA	False	NA	NA	NA	150881333	150882917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150881300_150882900
ES.20300.2	chr2	+	2565	1	Intergenic	novelGene_16788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGGTGGTGCGTA	NA	False	NA	NA	False	AATAAA	-13	NA	150881424	150883989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_150881400_150884000
ES.20301.1	chr2	+	1444	9	NNC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	460.561189610023	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336099	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151342710_151344928_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.11	chr2	+	1334	9	NNC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	460.561189610023	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336210	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151342716_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.13	chr2	+	7604	6	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	1	5	intron_retention	FALSE	canonical	3	1338	junction_3	49.9559806229444	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336213	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151346124_151347272_151347383_151348166_151351594_151352826
ES.20301.14	chr2	+	2431	10	NNC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	494.888639425173	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336215	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151342710_151343272_151344381_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.15	chr2	+	1225	8	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	2	67	junction_1	459.381394166244	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336215	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.18	chr2	+	3921	8	NIC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	-4	5	intron_retention	FALSE	canonical	3	449	junction_3	329.600624132557	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336219	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151344381_151344933_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.19	chr2	+	5108	8	NNC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	83	0	intron_retention	FALSE	non_canonical	0	0	junction_3	603.466821027994	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	19	True	AAGAAA	-1	NA	151336313	151353225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151344364_151344804_151346124_151347272_151347383_151348166_151348305_151351428_151352725_151352826
ES.20301.2	chr2	+	3695	8	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1303	junction_6	54.199179148841	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	19	True	AAGAAA	-1	NA	151336105	151353225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.3	chr2	+	4630	7	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	2	4	intron_retention	FALSE	canonical	3	1303	junction_5	56.831378265493	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTTATATAGAAATTCC	NA	False	NA	28	True	AAGAAA	-10	NA	151336110	151353234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.4	chr2	+	4917	7	NIC	ENSMUSG00000027455.17	novel	1364	9	NA	NA	3	-5	intron_retention	FALSE	canonical	3	1303	junction_6	47.7342178688994	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATACTACCAATTCTGT	NA	False	NA	14	True	NA	NA	NA	151336111	151353220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428
ES.20301.6	chr2	+	5639	9	NNC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	23	5	intron_retention	FALSE	canonical	2	4	junction_3	520.737562861563	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336131	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151342710_151343272_151344381_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151351594_151352826
ES.20301.7	chr2	+	1476	10	NNC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	572.671409457358	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336197	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151336333_151338503_151338602_151342634_151342710_151343272_151343408_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.8	chr2	+	3007	9	NIC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	-7	5	intron_retention	FALSE	canonical	3	449	junction_3	313.397411444319	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336202	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151344381_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ES.20301.9	chr2	+	5013	8	NIC	ENSMUSG00000027455.17	novel	1486	10	NA	NA	-1	5	intron_retention	FALSE	canonical	1	251	junction_3	403.536306942025	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAATAAAAAA	NA	False	NA	-19	True	NA	NA	NA	151336208	151353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151336333_151338503_151338602_151342634_151342710_151344374_151345100_151346030_151346124_151347272_151347383_151348166_151351594_151352826
ES.20302.1	chr2	+	1382	1	Intergenic	novelGene_16789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGATAGCTCCTTT	6041	False	NA	NA	False	NA	NA	NA	151359082	151360464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151359100_151360500
ES.20303.1	chr2	+	1796	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	-138	0	-138	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGAGGTTGC	NA	False	NA	25	True	AATAAA	-26	NA	151384264	151403612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.10	chr2	+	1590	5	NNC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1054.51813640165	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGTCATGGAGG	NA	False	NA	21	True	AATAAA	-22	NA	151384460	151403608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151384665_151384743_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.11	chr2	+	1518	4	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_1	1154.76529601858	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGTCATGGAGG	NA	False	NA	21	True	AATAAA	-22	NA	151384486	151403608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151399305_151399419_151401377_151401537_151402540
ES.20303.12	chr2	+	4223	5	NIC	ENSMUSG00000032966.15	novel	783	6	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	17	junction_2	977.367734018266	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGAGGTTG	NA	False	NA	24	True	AATAAA	-25	NA	151384486	151403611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151387436_151399305_151399419_151401377_151401541_151402540
ES.20303.13	chr2	+	1269	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	86	303	-16	-301	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGAAGGTGCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	151384488	151403309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.14	chr2	+	1638	11	Fusion	ENSMUSG00000032966.15_ENSMUSG00000027456.9	novel	783	6	NA	NA	-9	-8	multi-exon	FALSE	canonical	0	0	junction_3	922.74753318554	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	False	NA	11	True	AATAAA	-11	NA	151384495	151431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_151384665_151384737_151384786_151399305_151399419_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.15	chr2	+	1466	6	NNC	ENSMUSG00000032966.15	novel	783	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	948.646066770953	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGTCATGGAGG	NA	False	NA	21	True	AATAAA	-22	NA	151384504	151403608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151384531_151384616_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.16	chr2	+	1533	5	NNC	ENSMUSG00000032966.15	novel	783	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	984.633561280541	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384504	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151384665_151384737_151384790_151399330_151399419_151401377_151401541_151402540
ES.20303.17	chr2	+	2440	3	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	77	junction_2	993	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384505	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151384786_151401377
ES.20303.19	chr2	+	2915	6	NIC	ENSMUSG00000032966.15	novel	783	6	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_2	1104.51716147826	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384509	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151386061_151387344_151387436_151399305_151399419_151401377_151401541_151402540
ES.20303.2	chr2	+	806	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	-12	864	-12	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGGTGAAGACTCAGT	NA	False	NA	9	True	CATAAA	-16	NA	151384390	151402748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.20	chr2	+	2330	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	109	-781	-2	781	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCTGGAGTAATAGCC	NA	False	NA	NA	False	ATTAAA	-12	NA	151384511	151404393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.21	chr2	+	2152	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	112	-606	1	606	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTAGAATAATGGTTG	NA	False	NA	NA	False	AATATA	-10	NA	151384514	151404218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.22	chr2	+	1608	10	Fusion	ENSMUSG00000032966.15_ENSMUSG00000027456.9	novel	783	6	NA	NA	1	-3	multi-exon	FALSE	canonical	0	0	junction_2	640.748771090761	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCGGTCATGAAAGT	NA	False	NA	16	True	AATAAA	-16	NA	151384514	151431922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_151384665_151384737_151384786_151424515_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.23	chr2	+	2542	4	FSM	ENSMUSG00000032966.15	ENSMUST00000148295.8	662	4	-20	-1860	1	-2	multi-exon	FALSE	canonical	3	2063	junction_1	221.63232816737	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTGTGTCATGGAGG	NA	False	NA	21	True	AATAAA	-22	NA	151384514	151403608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377
ES.20303.24	chr2	+	1602	4	FSM	ENSMUSG00000032966.15	ENSMUST00000148978.8	438	4	-136	-1028	7	-9	multi-exon	FALSE	canonical	3	2178	junction_3	168.053562889931	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCAGCTCTGTGTC	NA	False	NA	14	True	AATAAA	-15	NA	151384520	151403601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151384786_151399305_151399419_151401377_151401541_151402540
ES.20303.25	chr2	+	1407	10	Fusion	ENSMUSG00000032966.15_ENSMUSG00000027456.9	novel	783	6	NA	NA	-2	-8	multi-exon	FALSE	canonical	2	5	junction_2	640.533130570172	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	False	NA	11	True	AATAAA	-11	NA	151384613	151431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_151384665_151384737_151384786_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.26	chr2	+	1486	5	ISM	ENSMUSG00000032966.15	ENSMUST00000142985.8	783	6	232	-862	80	0	3prime_fragment	FALSE	canonical	1	2	junction_1	1168.33225154491	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384736	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151384786_151387344_151387436_151399305_151399419_151401377_151401541_151402540
ES.20303.27	chr2	+	1609	4	FSM	ENSMUSG00000032966.15	ENSMUST00000142271.2	1588	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	41	junction_1	1089.25550517569	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151385797	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151386061_151399305_151399419_151401377_151401541_151402540
ES.20303.28	chr2	+	4642	1	NIC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	10776	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	710	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGGGTGAAGACTCAG	NA	False	NA	8	True	CATAAA	-15	NA	151398105	151402747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151398100_151402700
ES.20303.29	chr2	+	1395	9	FSM	ENSMUSG00000027456.9	ENSMUST00000028950.9	1399	9	3	1	3	-1	multi-exon	FALSE	canonical	1	3	junction_1	9.20258115965298	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGGTCATGAAAGTTC	NA	False	NA	18	True	AATAAA	-18	NA	151414544	151431924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151414625_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.3	chr2	+	3618	4	NIC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2063	junction_1	214.734461344445	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384399	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151384786_151399305_151401541_151402540
ES.20303.30	chr2	+	1422	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3392	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.04285397107271	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCGGTCATGAAAGT	NA	False	NA	16	True	AATAAA	-16	NA	151417933	151431922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151418043_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.31	chr2	+	7769	8	ISM	ENSMUSG00000027456.9	ENSMUST00000028950.9	1399	9	3615	3	3615	-3	3prime_fragment	FALSE	canonical	3	21	junction_5	4.42165358301205	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCGGTCATGAAAGT	NA	False	NA	16	True	AATAAA	-16	NA	151418156	151431922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.32	chr2	+	1369	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3633	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0987313559674	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	False	NA	11	True	AATAAA	-11	NA	151418174	151431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151418236_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.33	chr2	+	1737	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3633	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0987313559674	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	False	NA	11	True	AATAAA	-11	NA	151418174	151431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151418604_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.34	chr2	+	3795	10	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	4309	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2202018532156	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	False	NA	11	True	AATAAA	-11	NA	151418850	151431917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151421106_151421670_151421903_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.35	chr2	+	3794	7	NIC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	8758	-3	intron_retention	FALSE	canonical	3	21	junction_4	4.20317340430616	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCCCGGTCATGAAAGT	NA	False	NA	16	True	AATAAA	-16	NA	151423299	151431922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ES.20303.4	chr2	+	1779	6	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	1097.51792696065	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384407	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151384786_151385932_151386061_151399305_151399419_151401377_151401541_151402540
ES.20303.6	chr2	+	1617	5	NNC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	1034.53090214841	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384447	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401547_151402540
ES.20303.8	chr2	+	3648	5	NIC	ENSMUSG00000032966.15	novel	783	6	NA	NA	-44	0	intron_retention	TRUE	canonical	1	2	junction_2	1056.29612325332	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384460	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151384786_151387344_151387436_151399305_151401541_151402540
ES.20303.9	chr2	+	1485	4	NIC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_2	964.4585124422	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384460	151403610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_151384665_151384737_151384786_151401377_151401541_151402540
ES.20304.1	chr2	-	421	3	NNC	ENSMUSG00000087433.2	novel	433	3	NA	NA	-527	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGCTATGACTCACCTG	NA	False	NA	NA	False	NA	NA	NA	151384795	151382646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151382806_151383342_151383525_151384715
ES.20305.1	chr2	-	1924	1	Antisense	novelGene_ENSMUSG00000032966.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTTGCTTTCAGAGA	NA	False	NA	NA	False	NA	NA	NA	151402635	151400711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_151400700_151402600
ES.20306.1	chr2	-	178	1	Intergenic	novelGene_16790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151404828	151404650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151404600_151404800
ES.20307.1	chr2	-	6158	2	Antisense	novelGene_ENSMUSG00000027456.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151418817	151411382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_151411963_151413239
ES.20308.1	chr2	-	3975	1	ISM	ENSMUSG00000027457.16	ENSMUST00000094456.10	4607	6	38014	12	37936	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCCTCAGCCTGGTG	NA	False	NA	-11	True	ATTAAA	-14	NA	151436455	151432480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_151432500_151436500
ES.20308.2	chr2	-	3344	5	FSM	ENSMUSG00000027457.16	ENSMUST00000109877.10	3367	5	62	-39	-5	39	multi-exon	TRUE	canonical	1	1	junction_2	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCCAACTTTGCAGCC	1701	False	NA	NA	False	CATAAA	-26	NA	151474451	151433605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151436520_151439028_151439179_151442897_151442995_151474067_151474175_151474375
ES.20308.3	chr2	-	3285	4	NNC	ENSMUSG00000027457.16	novel	4910	5	NA	NA	26723	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTAGTCCAACTTTGCA	NA	False	NA	NA	False	CATAAA	-23	NA	151447668	151433608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151436520_151439028_151439179_151442897_151442995_151447541
ES.20309.1	chr2	-	2770	13	NNC	ENSMUSG00000074704.10	novel	1659	13	NA	NA	-2025	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.276385399196283	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGATTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	151512478	151486215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151487513_151493807_151493898_151495379_151495505_151496522_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269_151506377_151508248_151508343_151509825_151509956_151510309_151510486_151512429
ES.2031.10	chr1	+	6287	37	NNC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-475	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.3960389740774	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATGTGTTGTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	179787561	179990146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.12	chr1	+	6482	36	NNC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-465	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.9682442972755	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAAATGTGTTGTTTCT	NA	False	NA	NA	False	AAGAAA	-13	NA	179787571	179990145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179897868_179897917_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.13	chr1	+	6917	38	NNC	ENSMUSG00000026490.19	novel	5247	38	NA	NA	-465	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.1873620737696	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787571	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179826926_179827019_179847191_179847266_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.14	chr1	+	6680	37	NNC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-464	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.9966744868366	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAATAGTCAAAGAAGCA	NA	False	NA	NA	False	AATAAA	-29	NA	179787572	179990075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179826926_179827019_179847191_179847266_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.15	chr1	+	6472	36	NIC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-462	-125	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	20.1853857015012	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAGAGTTTAAATAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	179787574	179990028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.16	chr1	+	6663	36	NIC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-462	-85	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.6924516772601	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAATGTAAATAGTCAA	NA	False	NA	NA	False	AATAAA	-22	NA	179787574	179990068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179788853_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.17	chr1	+	4887	13	ISM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	-1099	65645	-461	1675	5prime_fragment	FALSE	canonical	3	8	junction_12	18.6120853808009	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGACATCCATTCTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	179787575	179924086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945
ES.2031.18	chr1	+	9688	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	-1091	-3437	-453	0	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGAGTATTCTATTTCT	NA	False	NA	2	True	AATAAA	-15	NA	179787583	179993168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.19	chr1	+	5953	36	NNC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-448	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	23.814932718951	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787588	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964317_179965293_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.2	chr1	+	6542	38	NNC	ENSMUSG00000026490.19	novel	5247	38	NA	NA	-631	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.264683914903	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787405	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.20	chr1	+	9424	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	-1073	-3434	-435	-2	multi-exon	FALSE	canonical	3	8	junction_12	17.6801894884082	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTGAGTATTCTATT	NA	False	NA	-1	True	AATAAA	-12	NA	179787601	179993165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.23	chr1	+	9875	38	NNC	ENSMUSG00000026490.19	novel	5247	38	NA	NA	-412	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.1187110177762	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTGAGTATTCTATT	NA	False	NA	-1	True	AATAAA	-12	NA	179787624	179993165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179798446_179798520_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.24	chr1	+	6514	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	-1045	-309	-407	-113	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATACATAGATGTAG	NA	False	NA	NA	False	ATTAAA	-32	NA	179787629	179990040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.25	chr1	+	6007	38	NNC	ENSMUSG00000026490.19	novel	5247	38	NA	NA	-215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	23.7471154682127	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787821	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179951488_179951528_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.26	chr1	+	6194	36	NNC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.4582485294654	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179788146	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179939019_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.27	chr1	+	5840	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCCATACAGAAAACATAAG	8243	False	NA	NA	False	NA	NA	NA	179811718	179817558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_179811700_179817600
ES.2031.28	chr1	+	5340	35	NNC	ENSMUSG00000026490.19	novel	3567	23	NA	NA	38212	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9084561804798	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATGTGTTGTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	179856516	179990146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179856552_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.29	chr1	+	5330	35	NNC	ENSMUSG00000026490.19	novel	3567	23	NA	NA	39349	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9084561804798	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGAAATGTGTTGTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	179857653	179990143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179857682_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.3	chr1	+	6843	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	-1261	-422	-623	0	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787413	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.31	chr1	+	4428	28	NNC	ENSMUSG00000026490.19	novel	4917	35	NA	NA	-17332	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.7703390442928	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATGTGTTGTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	179894715	179990146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179894965_179896861_179896942_179899909_179900077_179902134_179902251_179911939_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.33	chr1	+	4720	22	ISM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	138769	-415	-1265	-7	3prime_fragment	FALSE	canonical	3	58	junction_3	11.6991772488205	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATGTGTTGTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	179927443	179990146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.34	chr1	+	8052	21	ISM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	140218	-422	184	0	3prime_fragment	FALSE	canonical	3	58	junction_2	11.3925414197184	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179928892	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.35	chr1	+	4136	19	ISM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	150192	-1494	-37	504	3prime_fragment	FALSE	canonical	3	61	junction_2	10.2632028788938	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGTCAGATCTTTAGTT	NA	False	NA	NA	False	TATAAA	-24	NA	179938866	179991225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.36	chr1	+	3844	2	FSM	ENSMUSG00000026490.19	ENSMUST00000129754.2	951	2	415	-3308	415	0	multi-exon	FALSE	canonical	3	79	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGAGTATTCTATTTC	NA	False	NA	1	True	AATAAA	-14	NA	179988986	179993167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179989263_179989599
ES.2031.4	chr1	+	6589	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	-1250	-422	-612	0	multi-exon	FALSE	canonical	3	8	junction_12	17.6801894884082	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787424	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.5	chr1	+	6027	36	NNC	ENSMUSG00000026490.19	novel	5160	36	NA	NA	-607	-90	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.9109677305612	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATACTGAATGTAAATA	NA	False	NA	NA	False	AATAAA	-17	NA	179787429	179990063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.6	chr1	+	6980	37	NIC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-602	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	17.1587540196301	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787434	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.7	chr1	+	6857	37	NNC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-567	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.3988252533223	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTTGTTTCTTGTCT	NA	False	NA	NA	False	AAGAAA	-18	NA	179787469	179990150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788853_179798446_179798520_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.2031.9	chr1	+	6278	37	NNC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-525	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	17.9911672429954	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787511	179990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_179788142_179788608_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ES.20310.1	chr2	+	1271	2	FSM	ENSMUSG00000044364.6	ENSMUST00000060196.3	1435	2	162	2	-141	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTACTTGGCAT	107	False	NA	NA	False	NA	NA	NA	151544089	151549228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151544366_151548233
ES.20311.1	chr2	+	2589	1	Antisense	novelGene_ENSMUSG00000032869.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTATAAAGTGCTATTT	NA	False	NA	NA	False	NA	NA	NA	151556073	151558662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_151556100_151558700
ES.20312.1	chr2	+	3246	1	Antisense	novelGene_ENSMUSG00000032869.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGAAAAGATATATATATA	4447	False	NA	NA	False	NA	NA	NA	151577097	151580343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_151577100_151580300
ES.20313.1	chr2	-	3772	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	37	0	20	0	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTTTTGGTGCTAA	NA	False	NA	NA	False	AATAGA	-20	NA	151583193	151557731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ES.20313.10	chr2	-	1359	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	2	2448	2	5	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGCTCCTTTTTGTTAA	NA	False	NA	-23	True	AATACA	-20	NA	151583228	151560179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ES.20313.11	chr2	-	1265	6	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	130.314389075037	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	-24	True	AATACA	-19	NA	151583218	151560180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151577393_151577547_151582930
ES.20313.12	chr2	-	5024	1	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	-2289	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACGCTCCTTTTTGTTA	NA	False	NA	-24	True	AATACA	-19	NA	151565204	151560180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151560200_151565200
ES.20313.13	chr2	-	3486	4	NNC	ENSMUSG00000032869.16	novel	2956	3	NA	NA	-2782	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	163.450978039968	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCACGCTCCTTTTTGT	NA	False	NA	-26	True	AATACA	-17	NA	151565697	151560182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151560606_151561404_151561564_151562742_151563967_151564017
ES.20313.14	chr2	-	2047	1	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	-1114	-578	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	151564029	151561982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151562000_151564000
ES.20313.2	chr2	-	3520	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	1	288	1	-38	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATTTGCTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	151583229	151558019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ES.20313.4	chr2	-	3333	7	NNC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	39	-166	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	122.997854543168	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCAGTGTTTCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	151583174	151558147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577543_151582930
ES.20313.6	chr2	-	2847	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	33	929	16	-679	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAATAGCTTTATTAA	NA	False	NA	0	True	AATAAA	-20	NA	151583197	151558660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ES.20313.7	chr2	-	3670	6	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	8	-680	intron_retention	FALSE	canonical	3	320	junction_2	7.4565407529229	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAATAGCTTTATTA	NA	False	NA	-1	True	AATAAA	-19	NA	151583222	151558661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ES.20313.9	chr2	-	2644	6	NIC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	128	-687	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	130.314389075037	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTTTTTTAATAGC	NA	False	NA	-8	True	AATAAA	-12	NA	151583085	151558668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151577393_151577547_151582930
ES.20314.1	chr2	+	2524	5	NNC	ENSMUSG00000032852.4	novel	2371	5	NA	NA	-139	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.82915619758885	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTGGTCATCAGATAG	NA	False	NA	NA	False	GATAAA	-15	NA	151684707	151716605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151685073_151709678_151709865_151710490_151710632_151711688_151711875_151714959
ES.20315.1	chr2	-	159	1	Intergenic	novelGene_16791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATTAAAAA	7673	False	NA	NA	False	NA	NA	NA	151743772	151743613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151743600_151743800
ES.20316.1	chr2	+	184	1	Intergenic	novelGene_16792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAGCACC	NA	False	NA	NA	False	NA	NA	NA	151791851	151792035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151791900_151792000
ES.20317.1	chr2	+	3713	1	Intergenic	novelGene_16793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGGGTACTAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	151794540	151798253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151794500_151798300
ES.20318.1	chr2	+	2731	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-63	1	-39	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	17	True	NA	NA	NA	151838391	151851177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ES.20318.10	chr2	+	2949	4	ISM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	17	-35	-15	0	intron_retention	FALSE	canonical	3	48	junction_1	25.2234458831902	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	17	True	NA	NA	NA	151841801	151851177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400
ES.20318.11	chr2	+	177	1	Intergenic	novelGene_16796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	151856970	151857147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151857000_151857100
ES.20318.2	chr2	+	2465	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	-47	251	-23	-215	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCCTGGTGAGGGCTA	NA	False	NA	34	True	ATTAAA	-38	NA	151838407	151850927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ES.20318.3	chr2	+	2486	6	NNC	ENSMUSG00000027463.15	novel	2669	5	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	39.9429593295239	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGGTACTCTTGACTTG	NA	False	NA	9	True	NA	NA	NA	151838439	151851169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151838572_151845971_151846599_151847451_151847644_151847832_151847940_151849400_151849525_151849865
ES.20318.4	chr2	+	2734	4	ISM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	3	273	3	-237	intron_retention	FALSE	canonical	3	44	junction_1	27.1088341484633	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGGCTGTGTACAC	NA	False	NA	12	True	ATTAAA	-16	NA	151838457	151850905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400
ES.20318.5	chr2	+	4158	6	NNC	ENSMUSG00000027463.15	novel	2669	5	NA	NA	3	37328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.282441788247	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGCTTATATTTGG	NA	False	NA	NA	False	AGTAAA	-17	NA	151838457	151888506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865_151850106_151885941
ES.20318.6	chr2	+	2992	4	ISM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	17	1	17	0	intron_retention	FALSE	canonical	3	44	junction_1	27.1088341484633	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	17	True	NA	NA	NA	151838471	151851177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400
ES.20318.7	chr2	+	3882	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	-1509	217	-1509	-217	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAAGCCTGGTGAGGGC	NA	False	NA	32	True	ATTAAA	-36	NA	151840275	151850925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ES.20318.8	chr2	+	4121	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	-1496	-35	-1496	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGACTTGTGTGCTCA	NA	False	NA	17	True	NA	NA	NA	151840288	151851177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ES.20318.9	chr2	+	4993	2	ISM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	15	237	15	-237	intron_retention	FALSE	canonical	3	48	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGGCTGTGTACAC	NA	False	NA	12	True	ATTAAA	-16	NA	151841799	151850905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_151841859_151845971
ES.20319.1	chr2	-	1752	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	0	2	0	-2	multi-exon	FALSE	canonical	3	86	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGACTCTTCTCT	NA	False	NA	-3	True	AATAAA	-20	NA	151822139	151811319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151812845_151821912
ES.20319.2	chr2	-	1604	1	NIC	ENSMUSG00000027459.17	novel	1853	2	NA	NA	2391	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGACTCTTCTCT	NA	False	NA	-3	True	AATAAA	-20	NA	151812923	151811319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_151811300_151812900
ES.20319.3	chr2	-	1779	2	NNC	ENSMUSG00000027459.17	novel	1853	2	NA	NA	-16812	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTTTTGGACTCTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	151838951	151811321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_151812845_151838695
ES.20319.4	chr2	-	1357	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	60	337	60	2	multi-exon	FALSE	canonical	3	86	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTGCTTCTGCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	151822079	151811654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_151812845_151821912
ES.2032.1	chr1	-	3995	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	34	-3	-5	3	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTCATTTTGTTTTCAA	3899	False	NA	NA	False	AATAAA	-19	NA	180023551	179992799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
ES.2032.2	chr1	-	2701	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	1	1324	1	457	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGTGGTCTTTGTCTG	3866	False	NA	50	True	NA	NA	NA	180023584	179994126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
ES.2032.3	chr1	-	4199	12	NIC	ENSMUSG00000026489.14	novel	4026	15	NA	NA	-4	404	intron_retention	FALSE	canonical	3	14	junction_5	4.02882178293824	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCGTTCCGTGA	3920	False	NA	-3	True	AATAAA	-21	NA	180023530	179994179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997768_179997907_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
ES.2032.4	chr1	-	2548	14	NIC	ENSMUSG00000026489.14	novel	4026	15	NA	NA	-5	404	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	6.6581800025792	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCGTTCCGTGA	3899	False	NA	-3	True	AATAAA	-21	NA	180023551	179994179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006447_180006850_180009626_180009813_180023437
ES.2032.5	chr1	-	2748	15	NIC	ENSMUSG00000026489.14	novel	3928	15	NA	NA	90	403	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	6.65973278865801	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCTATGCGTTCCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	180010275	179994180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180010027
ES.20320.1	chr2	-	4461	2	Intergenic	novelGene_16794	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGGATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	151866295	151851314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151855505_151866024
ES.20320.2	chr2	-	4354	2	Intergenic	novelGene_16795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGGCTGGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	151858064	151851316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151855505_151857898
ES.20320.3	chr2	-	527	2	Intergenic	novelGene_16797	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGCTCCTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	151863066	151861013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151861430_151862955
ES.20321.1	chr2	+	3302	2	Intergenic	novelGene_16798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTGCATCTCATTTGC	NA	False	NA	NA	False	NA	NA	NA	151889039	151892442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151889094_151889194
ES.20322.1	chr2	-	180	1	Intergenic	novelGene_16799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGTGCACCACC	NA	False	NA	NA	False	NA	NA	NA	151905623	151905443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151905400_151905600
ES.20323.1	chr2	+	179	1	Intergenic	novelGene_16800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGATTCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	151927955	151928134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151928000_151928100
ES.20324.1	chr2	+	2640	2	NNC	ENSMUSG00000032802.9	novel	446	2	NA	NA	-595	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCATGCAATAGCCTTAG	NA	False	NA	12	True	NA	NA	NA	151946840	151953277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151947112_151950908
ES.20324.2	chr2	+	2700	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	-106	-2148	-106	-17	multi-exon	FALSE	canonical	3	20	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCAATAGCCTTAGCC	NA	False	NA	14	True	NA	NA	NA	151947329	151953279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151947659_151950908
ES.20324.3	chr2	+	1842	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	-20	-1376	-20	-789	multi-exon	FALSE	canonical	3	20	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGGTACATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	151947415	151952507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151947659_151950908
ES.20324.4	chr2	+	2756	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	46	10	46	-10	multi-exon	FALSE	canonical	3	134	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCTTAGCCCAACAGT	NA	False	NA	21	True	NA	NA	NA	151947489	151953286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151947868_151950908
ES.20324.5	chr2	+	1065	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	69	-688	61	577	multi-exon	FALSE	canonical	3	20	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGAGTGTGACTGCCT	NA	False	NA	NA	False	AAGAAA	-23	NA	151947504	151951819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151947659_151950908
ES.20324.6	chr2	+	1817	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	206	789	206	-789	multi-exon	FALSE	canonical	3	134	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGGTACATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	151947649	151952507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151947868_151950908
ES.20325.1	chr2	-	177	1	Intergenic	novelGene_16801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAGCCCAA	8974	False	NA	NA	False	NA	NA	NA	151950401	151950224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_151950200_151950400
ES.20326.1	chr2	+	1023	3	NNC	ENSMUSG00000068079.6	novel	980	2	NA	NA	-1324	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGGTGTGTATCCT	5765	False	NA	NA	False	AATAAA	-10	NA	151984156	151991010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151984443_151984960_151985303_151990615
ES.20326.2	chr2	+	1003	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	-26	3	-26	-3	multi-exon	FALSE	canonical	3	131	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTGTGTATCCTGGCT	7063	False	NA	NA	False	AATAAA	-14	NA	151985454	151991014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_151986059_151990615
ES.20326.3	chr2	+	1061	3	NNC	ENSMUSG00000068079.6	novel	980	2	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGGTGTGTATCCT	7083	False	NA	NA	False	AATAAA	-10	NA	151985474	151991010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_151986059_151988898_151988981_151990615
ES.20326.4	chr2	+	5542	1	Genic_Genomic	ENSMUSG00000068079.6	novel	NA	NA	NA	NA	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTATCCTGGCTAAG	7084	False	NA	NA	False	AATAAA	-17	NA	151985475	151991017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_151985500_151991000
ES.20327.1	chr2	+	185	1	Intergenic	novelGene_16802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	151994351	151994536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_151994400_151994500
ES.20328.1	chr2	-	3526	1	Intergenic	novelGene_16803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTTGTTTATTATT	NA	False	NA	NA	False	AATAAA	-18	NA	152019262	152015736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152015700_152019300
ES.20329.1	chr2	+	573	1	Intergenic	novelGene_16804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	152019654	152020227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152019700_152020200
ES.2033.1	chr1	+	210	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCTGATGATCTTTTG	NA	False	NA	NA	False	NA	NA	NA	180041104	180041314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180041100_180041300
ES.20330.1	chr2	-	174	1	Intergenic	novelGene_16805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	152023083	152022909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152022900_152023100
ES.20331.1	chr2	+	518	1	Intergenic	novelGene_16806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGAGTACTTTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	152023814	152024332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152023800_152024300
ES.20332.1	chr2	-	457	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	-29	-36	-29	36	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGGTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	152027631	152027174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152027200_152027600
ES.20333.1	chr2	+	347	1	Intergenic	novelGene_16807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGTGGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	152029464	152029811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152029500_152029800
ES.20334.1	chr2	+	175	1	Intergenic	novelGene_16808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	152058194	152058369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152058200_152058400
ES.20335.1	chr2	+	4231	13	NNC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-288	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.497815177327	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAACTTAATACGGGGT	NA	False	NA	8	True	AATAAA	-22	NA	152068470	152123846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152068575_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.10	chr2	+	3966	11	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-8	-1514	intron_retention	FALSE	canonical	1	1	junction_5	47.2424597158107	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAGATTTAAGTTCCC	NA	False	NA	-2	True	AATAAA	-19	NA	152068787	152122258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152102678_152102763_152105102_152105214_152114547_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.11	chr2	+	4084	12	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-7	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	49.9841297127448	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTCCATGCAGCCTG	NA	False	NA	14	True	AATAAA	-15	NA	152068788	152123767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152120888
ES.20335.14	chr2	+	4039	12	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	50.7727069260153	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATGTCCATGCAGCC	NA	False	NA	12	True	AATAAA	-13	NA	152068817	152123765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152117317_152117467_152118866_152118954_152120888
ES.20335.15	chr2	+	2866	12	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	26	-2603	intron_retention	FALSE	canonical	2	55	junction_1	33.5012026427768	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTCTTTCTTTCTT	NA	False	NA	6	True	CATAAA	-17	NA	152068858	152121169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.16	chr2	+	182	1	Intergenic	novelGene_16814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAGTAAATAA	2039	False	NA	NA	False	NA	NA	NA	152097132	152097314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152097100_152097300
ES.20335.17	chr2	+	3747	4	ISM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	46728	0	46654	0	3prime_fragment	FALSE	canonical	3	119	junction_1	16.0485374896143	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGCAGCCTGAGCAA	4652	False	NA	19	True	AATAAA	-20	NA	152115486	152123772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.18	chr2	+	8053	1	Genic_Genomic	ENSMUSG00000074698.11	novel	NA	NA	NA	NA	53054	6167	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAACGGCCCAAATTCCT	NA	False	NA	NA	False	AATAAA	-35	NA	152121886	152129939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_152121900_152129900
ES.20335.2	chr2	+	2630	13	NNC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-275	-1514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.497815177327	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAGATTTAAGTTCCC	NA	False	NA	-2	True	AATAAA	-19	NA	152068483	152122258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152068575_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.4	chr2	+	4275	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	0	-69	0	69	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGATTTGAACTTAATAC	NA	False	NA	3	True	AATAAA	-17	NA	152068758	152123841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.5	chr2	+	4167	11	NIC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	3	-2603	intron_retention	FALSE	canonical	2	55	junction_1	34.8633044905385	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTCTTTCTTTCTT	NA	False	NA	6	True	CATAAA	-17	NA	152068761	152121169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152117467_152118866_152118954_152120888
ES.20335.6	chr2	+	1599	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	4	2603	4	-2603	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTCTTTCTTTCTT	NA	False	NA	6	True	CATAAA	-17	NA	152068762	152121169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.7	chr2	+	2797	14	NNC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	8	-1514	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	52.761493041128	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAGATTTAAGTTCCC	NA	False	NA	-2	True	AATAAA	-19	NA	152068766	152122258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152068912_152090618_152090732_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.8	chr2	+	2686	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	12	1508	12	-1508	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAAGTTCCCTGTGTA	NA	False	NA	4	True	AATAAA	-25	NA	152068770	152122264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ES.20335.9	chr2	+	2139	15	NNC	ENSMUSG00000074698.11	novel	4206	13	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9222285081901	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATGTCCATGCAGCC	NA	False	NA	12	True	AATAAA	-13	NA	152068787	152123765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152068912_152076831_152076928_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888_152121039_152123165
ES.20336.1	chr2	+	3406	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	-4	-16	-4	16	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGCTTGCCTGGATATC	NA	False	NA	44	True	AATAAA	-39	NA	152135743	152155932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ES.20336.10	chr2	+	3148	7	NIC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	69.9398551137571	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGTCTTTGTATCA	NA	False	NA	24	True	AATAAA	-19	NA	152135795	152155912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152135961_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ES.20336.11	chr2	+	3263	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.5021420431798	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	NA	False	NA	23	True	AATAAA	-18	NA	152135795	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152378_152153236_152153425_152153629
ES.20336.12	chr2	+	3411	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.5021420431798	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGTCTTTGTATCA	NA	False	NA	24	True	AATAAA	-19	NA	152135795	152155912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153502_152153629
ES.20336.13	chr2	+	1406	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	48	1932	4	1246	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTGCCACCCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	152135795	152153984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ES.20336.16	chr2	+	3411	9	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.8887666274483	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	NA	False	NA	23	True	AATAAA	-18	NA	152135795	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152148009_152148088_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ES.20336.17	chr2	+	3224	7	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.2544172711808	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	NA	False	NA	23	True	AATAAA	-18	NA	152135795	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153502_152153629
ES.20336.18	chr2	+	2941	1	NIC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	2852	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	9415	False	NA	23	True	AATAAA	-18	NA	152152970	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152153000_152155900
ES.20336.2	chr2	+	3580	7	ISM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	7	4	7	-4	intron_retention	FALSE	canonical	3	150	junction_1	25.6043616076116	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGTCTTTGTATCA	NA	False	NA	24	True	AATAAA	-19	NA	152135754	152155912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236
ES.20336.3	chr2	+	3531	7	FSM	ENSMUSG00000027465.14	ENSMUST00000140482.2	3496	7	-37	2	7	-2	multi-exon	FALSE	canonical	3	150	junction_1	23.7323033484368	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTCTTTGTATCATC	NA	False	NA	26	True	AATAAA	-21	NA	152135754	152155914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153236_152153425_152153629
ES.20336.4	chr2	+	3731	6	ISM	ENSMUSG00000027465.14	ENSMUST00000140482.2	3496	7	-35	5	9	-5	intron_retention	FALSE	canonical	3	150	junction_1	25.7914714586043	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	NA	False	NA	23	True	AATAAA	-18	NA	152135756	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153236
ES.20336.5	chr2	+	3291	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	59.9952379062586	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTGTCTTTGTATCAT	NA	False	NA	25	True	AATAAA	-20	NA	152135764	152155913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153311_152153425_152153629
ES.20336.6	chr2	+	3443	7	NNC	ENSMUSG00000027465.14	novel	3496	7	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	17	junction_5	64.8022633349587	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCACTTGTCTTTGTATC	NA	False	NA	23	True	AATAAA	-18	NA	152135764	152155911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153311_152153425_152153629
ES.20336.7	chr2	+	3382	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	64.1057799298017	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGTCTTTGTATCA	NA	False	NA	24	True	AATAAA	-19	NA	152135768	152155912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152135961_152144071_152144279_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ES.20337.1	chr2	+	2781	6	Antisense	novelGene_ENSMUSG00000027466.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAAAGATC	5258	False	NA	NA	False	NA	NA	NA	152165393	152175212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152166365_152166447_152166561_152168135_152168333_152169164_152169263_152172881_152173025_152173953
ES.20338.1	chr2	-	2034	14	NNC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	-3	114196	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	211.795759605763	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTTAAAAAAGGGTC	NA	False	NA	NA	False	NA	NA	NA	152174307	152044057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152044105_152131558_152131687_152158753_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.10	chr2	-	165	1	Antisense	novelGene_ENSMUSG00000074698.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	152121356	152121191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_152121200_152121400
ES.20338.11	chr2	-	317	1	Intergenic	novelGene_16816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTATAGTTCAGAATCT	NA	False	NA	NA	False	NA	NA	NA	152131683	152131366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152131400_152131700
ES.20338.12	chr2	-	6430	12	NNC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	46	11874	intron_retention	TRUE	non_canonical	0	0	junction_1	248.43403767274	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACACTTTGATATAAGC	NA	False	NA	NA	False	NA	NA	NA	152174527	152146379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152146564_152158753_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164179_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152173025_152173953_152174043_152174415
ES.20338.13	chr2	-	4230	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	31	-1877	3	1877	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGCTAAAAATCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	152174301	152156376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.14	chr2	-	5517	7	NNC	ENSMUSG00000027466.16	novel	657	5	NA	NA	-4	1877	intron_retention	TRUE	non_canonical	0	0	junction_1	228.061699741296	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGCTAAAAATCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	152174308	152156376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152157057_152162432_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.15	chr2	-	3921	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	26	1864	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	188.779118430921	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGAAAAATGCCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	152174278	152156389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.16	chr2	-	4007	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	8	0	intron_retention	FALSE	canonical	2	6	junction_8	179.351498460425	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174324	152158253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152169032_152169166_152169261_152172879_152173025_152173953
ES.20338.17	chr2	-	3924	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	444	junction_6	70.9340538810521	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174297	152158253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.18	chr2	-	12253	7	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	483	junction_1	58.5974971024076	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174317	152158253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152166361_152166444_152168335_152169166_152173025_152173953
ES.20338.19	chr2	-	2237	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	221.951548766842	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174334	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173022_152173953
ES.20338.2	chr2	-	4751	1	Intergenic	novelGene_16809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152077156	152072405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152072400_152077200
ES.20338.20	chr2	-	2237	13	NNC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	206.260891968292	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174586	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160706_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ES.20338.21	chr2	-	5224	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	11	-2	intron_retention	FALSE	canonical	3	37	junction_10	173.535126127248	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174321	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173022_152173953
ES.20338.22	chr2	-	2338	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_6	170.216633967832	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174300	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165241_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.24	chr2	-	7043	9	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	483	junction_1	55.9659494692978	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174303	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.25	chr2	-	4257	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-41	-2	intron_retention	FALSE	canonical	3	483	junction_1	61.0563390911204	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174373	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.28	chr2	-	4891	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	483	junction_1	63.270143915682	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174332	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.29	chr2	-	6240	9	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	483	junction_1	56.0329144342859	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174316	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152164192_152165091_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.3	chr2	-	3054	2	Antisense	novelGene_ENSMUSG00000074698.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152081949	152072405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_152072807_152079296
ES.20338.30	chr2	-	2780	3	NIC	ENSMUSG00000027466.16	novel	1842	5	NA	NA	1772	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	266.5	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152163145	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160632_152160732_152161043
ES.20338.32	chr2	-	2400	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	174.009451628923	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174308	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165295_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.33	chr2	-	2106	12	NIC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	205.404821014181	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174590	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ES.20338.34	chr2	-	5674	9	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	18	-2	intron_retention	FALSE	canonical	3	37	junction_8	188.111295181868	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174286	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152169261_152172879_152173022_152173953
ES.20338.36	chr2	-	2246	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-38	-2	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_5	180.796460142338	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174370	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164179_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.37	chr2	-	3054	12	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	6	junction_9	172.158201317834	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174307	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152169032_152169166_152169261_152172879_152173025_152173953
ES.20338.38	chr2	-	1492	7	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	1342	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	220.440972194876	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152168335	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152166186_152166361_152166444_152166561_152168135
ES.20338.39	chr2	-	2268	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	-18	2	-18	-2	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174591	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ES.20338.4	chr2	-	143	1	Intergenic	novelGene_16810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	152073553	152073410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152073400_152073600
ES.20338.40	chr2	-	2407	13	NIC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	216.147760031573	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152174301	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152168975_152169032_152169166_152169261_152172879_152173025_152173953
ES.20338.41	chr2	-	1547	7	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	-57	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	207.433054796535	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152166341	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161341_152164079_152164192_152165091_152165253_152166186
ES.20338.42	chr2	-	4310	3	ISM	ENSMUSG00000027466.16	ENSMUST00000130165.8	1842	5	698	2	698	-2	intron_retention	FALSE	canonical	3	483	junction_1	84.5	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAAGGTGTCATGCTT	NA	False	NA	-14	True	ATTAAA	-14	NA	152164219	152158255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152158835_152160231_152160376_152160632
ES.20338.43	chr2	-	3142	12	NIC	ENSMUSG00000027466.16	novel	2252	13	NA	NA	41	-3	intron_retention	FALSE	canonical	3	72	junction_11	154.895325892911	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAAAGGTGTCATGCT	NA	False	NA	-15	True	ATTAAA	-13	NA	152174532	152158256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ES.20338.44	chr2	-	3339	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	3	-4	intron_retention	FALSE	canonical	2	3	junction_4	181.67124153261	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAAGGTGTCATGC	NA	False	NA	-16	True	ATTAAA	-12	NA	152174301	152158257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161280_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.45	chr2	-	5981	9	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	47	-6	intron_retention	FALSE	canonical	3	483	junction_1	64.5434688795079	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGGAAAGGTGTCAT	NA	False	NA	-18	True	ATTAAA	-10	NA	152174526	152158259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152166361_152166444_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.47	chr2	-	2021	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	42	189	42	-189	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCCTGAGCTTGCTC	NA	False	NA	5	True	NA	NA	NA	152174531	152158442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ES.20338.49	chr2	-	4351	4	ISM	ENSMUSG00000027466.16	ENSMUST00000130165.8	1842	5	148	199	148	-199	intron_retention	FALSE	canonical	3	483	junction_1	69.4854101392675	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACTCTATTTTCCCT	NA	False	NA	-5	True	ATTAAA	-37	NA	152164769	152158452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043
ES.20338.5	chr2	-	204	1	Intergenic	novelGene_16811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAACTA	NA	False	NA	NA	False	NA	NA	NA	152074506	152074302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152074300_152074500
ES.20338.50	chr2	-	2190	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	2	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	226.557346835098	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTGAGTGACTCTAT	NA	False	NA	-12	True	ATTAAA	-30	NA	152174302	152158459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161280_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166547_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.52	chr2	-	1673	4	ISM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	24	9002	-4	-796	5prime_fragment	FALSE	canonical	3	546	junction_3	42.4682888230213	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTATTTGTTTGCTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	152174308	152167255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152168335_152169166_152169261_152172879_152173025_152173953
ES.20338.6	chr2	-	3294	1	Intergenic	novelGene_16812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-35	NA	152081949	152078655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152078700_152081900
ES.20338.7	chr2	-	179	1	Intergenic	novelGene_16813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	152091638	152091459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152091500_152091600
ES.20338.8	chr2	-	1316	1	Antisense	novelGene_ENSMUSG00000074698.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152117320	152116004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_152116000_152117300
ES.20338.9	chr2	-	177	1	Intergenic	novelGene_16815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	152117818	152117641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152117600_152117800
ES.20339.1	chr2	+	1610	1	Antisense	novelGene_ENSMUSG00000032715.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCCTGGAACTCACTCT	1504	False	NA	NA	False	NA	NA	NA	152179237	152180847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152179200_152180800
ES.20339.2	chr2	+	3332	1	Antisense	novelGene_ENSMUSG00000032715.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGATGCTAAAATC	1504	False	NA	NA	False	NA	NA	NA	152179237	152182569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152179200_152182600
ES.2034.1	chr1	-	2898	1	FSM	ENSMUSG00000104520.2	ENSMUST00000193705.2	468	1	-2428	-2	-2428	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCTTTGGACCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	180042394	180039496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180039500_180042400
ES.20340.1	chr2	+	116	1	Intergenic	novelGene_16817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7308	False	NA	NA	False	NA	NA	NA	152186851	152186967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152186900_152187000
ES.20340.2	chr2	+	2784	1	Genic_Genomic	ENSMUSG00000068062.4	novel	NA	NA	NA	NA	-734	-27431	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTTGGGAACTTAATC	7311	False	NA	NA	False	AAGAAA	-1	NA	152186854	152189638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_152186900_152189600
ES.20341.1	chr2	-	2022	5	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-14	3577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.200445323852	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	152185922	152175764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152175797_152179347_152180608_152181634_152181928_152184956_152185248_152185776
ES.20341.10	chr2	-	2102	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-1087	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	441.743012269452	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATCCTTGGTGACTTT	NA	False	NA	-8	True	AATAAA	-25	NA	152187039	152179345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152186783
ES.20341.11	chr2	-	1549	5	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5945	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	460.906918477039	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACATCCTTGGTGACTT	NA	False	NA	-9	True	AATAAA	-24	NA	152191897	152179346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152179831_152180214_152180608_152181634_152181928_152184956_152185248_152191809
ES.20341.12	chr2	-	1779	1	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	4763	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATCCTTGGTGAC	4581	False	NA	-11	True	AATAAA	-22	NA	152181127	152179348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152179300_152181100
ES.20341.13	chr2	-	2137	5	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5970	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	463.287370322136	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAACATCCTTGGTGA	NA	False	NA	-12	True	AATAAA	-21	NA	152191922	152179349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191241_152191424_152191809
ES.20341.14	chr2	-	1829	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	437.996448488899	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGAAACATCCTTGGT	NA	False	NA	-14	True	AATAAA	-19	NA	152185954	152179351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152185145_152185248_152185776
ES.20341.17	chr2	-	2487	1	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	1	1393	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAGTCTGTGTATTT	NA	False	NA	NA	False	NA	NA	NA	152185951	152183464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152183500_152186000
ES.20341.2	chr2	-	1667	3	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	453.5	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTGACTTTCTCTT	NA	False	NA	-3	True	AATAAA	-30	NA	152185885	152179340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152180608_152184956_152185248_152185776
ES.20341.3	chr2	-	2577	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	-551	0	-551	0	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152186503	152179341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ES.20341.4	chr2	-	3025	3	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	8	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	463	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	152185900	152179344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180866_152183867_152185248_152185776
ES.20341.6	chr2	-	1995	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-6005	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	427.130737206615	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	152191957	152179344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191809
ES.20341.7	chr2	-	2037	5	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-5899	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	464.552741892672	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	152191851	152179344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152191241_152191390_152191809
ES.20341.8	chr2	-	2030	4	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-51	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	423.359841689733	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	152186003	152179344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152180608_152181634_152181928_152184956_152185204_152185776
ES.20341.9	chr2	-	2264	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	-519	-3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	438.443458916502	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTTGGTGACTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	152186471	152179344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152180608_152181634_152181928_152184956_152185248_152186054
ES.20342.1	chr2	+	213	1	Intergenic	novelGene_16818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTATTTGATTGACTT	NA	False	NA	NA	False	NA	NA	NA	152196673	152196886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152196700_152196900
ES.20343.1	chr2	-	178	1	Intergenic	novelGene_16819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACACTCG	NA	False	NA	NA	False	NA	NA	NA	152199228	152199050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152199000_152199200
ES.20344.1	chr2	+	3596	4	NNC	ENSMUSG00000068062.4	novel	1999	5	NA	NA	13864	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCTGTCCTTCAATC	NA	False	NA	8	True	AATAAA	-22	NA	152201452	152217251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152203268_152203718_152203865_152210617_152210721_152215719
ES.20345.1	chr2	-	2494	2	Antisense	novelGene_ENSMUSG00000068062.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	152202663	152200067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_152201106_152201207
ES.20346.1	chr2	-	640	1	Intergenic	novelGene_16820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	ACTAAA	-22	NA	152233154	152232514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152232500_152233200
ES.20347.1	chr2	-	205	1	Intergenic	novelGene_16821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGATGAGTCTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	152234130	152233925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152233900_152234100
ES.20348.1	chr2	+	4663	2	Antisense	novelGene_ENSMUSG00000051817.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCGTGGTCATGATGT	2833	False	NA	NA	False	NA	NA	NA	152239569	152245968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152242676_152244411
ES.20348.2	chr2	+	173	1	Intergenic	novelGene_16822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGAGGTGTGGCC	2215	False	NA	NA	False	NA	NA	NA	152245557	152245730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152245600_152245700
ES.20349.1	chr2	-	4579	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-125	-1	-125	1	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTTGGTGTTGTGTCT	NA	False	NA	-2	True	NA	NA	NA	152240108	152235529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152235500_152240100
ES.20349.10	chr2	-	2872	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	186	-1290	intron_retention	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGCCCTGTGGTTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	152239780	152236823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152238146_152238230
ES.20349.11	chr2	-	3001	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	10	1442	-7	-1439	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCATGTGAGTGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	152239973	152236972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152237000_152240000
ES.20349.12	chr2	-	1574	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-65	-1488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152240048	152237021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152238526_152239978
ES.20349.2	chr2	-	3275	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-158	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCTTGGTGTTGT	NA	False	NA	-6	True	NA	NA	NA	152240141	152235533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152238451_152239783
ES.20349.3	chr2	-	3567	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCTTGGTGTTGT	NA	False	NA	-6	True	NA	NA	NA	152240064	152235533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152238324_152239287
ES.20349.4	chr2	-	3584	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	11	858	-6	-855	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGTAGCTTTGCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	152239972	152236388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152236400_152240000
ES.20349.5	chr2	-	3324	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-157	1286	-157	-1283	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGTTCTGCATGTGT	NA	False	NA	-1	True	AATAAA	-21	NA	152240140	152236816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152236800_152240100
ES.20349.6	chr2	-	3196	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-157	-1289	intron_retention	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCCCTGTGGTTCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	152240140	152236822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152239945_152240066
ES.20349.7	chr2	-	3011	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-97	-1289	intron_retention	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCCCTGTGGTTCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	152240080	152236822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152239679_152239925
ES.20349.8	chr2	-	2781	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-50	-1289	intron_retention	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCCCTGTGGTTCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	152240033	152236822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152238644_152239073
ES.20349.9	chr2	-	3192	2	NNC	ENSMUSG00000051817.9	novel	4169	2	NA	NA	-122	-1290	intron_retention	FALSE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGCCCTGTGGTTCTG	NA	False	NA	-8	True	AATAAA	-14	NA	152240105	152236823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152239557_152239646
ES.2035.1	chr1	-	1661	9	ISM	ENSMUSG00000010609.16	ENSMUST00000010753.14	2004	11	5114	3	-1614	-3	3prime_fragment	FALSE	canonical	3	24	junction_3	4.789311015167	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGCTGGTGTTTGGCC	NA	False	NA	-3	True	AATAAA	-14	NA	180068401	180054573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295
ES.20350.1	chr2	+	180	1	Intergenic	novelGene_16823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAATCTTAAAAAAAAG	7642	False	NA	NA	False	NA	NA	NA	152250984	152251164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152251000_152251200
ES.20351.1	chr2	+	815	1	Antisense	novelGene_ENSMUSG00000074682.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGCACTTAAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	152254617	152255432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152254600_152255400
ES.20352.1	chr2	-	3143	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	-70	0	-70	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152257017	152253874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152253900_152257000
ES.20352.2	chr2	-	2103	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	-27	997	-27	-997	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCCATTGTGACAGC	NA	False	NA	NA	False	NA	NA	NA	152256974	152254871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152254900_152257000
ES.20353.1	chr2	-	188	1	Intergenic	novelGene_16824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATCAAAATAAATAG	NA	False	NA	NA	False	NA	NA	NA	152266334	152266146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152266100_152266300
ES.20354.1	chr2	-	185	1	Intergenic	novelGene_16825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTGAGATGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	152270573	152270388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152270400_152270600
ES.20355.1	chr2	-	183	1	Intergenic	novelGene_16826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAACAAAC	5391	False	NA	NA	False	NA	NA	NA	152338704	152338521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152338500_152338700
ES.20356.1	chr2	+	180	1	Intergenic	novelGene_16827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTATTTTTTTATT	3713	False	NA	4	True	NA	NA	NA	152419481	152419661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152419500_152419700
ES.20357.1	chr2	-	90	1	Intergenic	novelGene_16828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	152419771	152419681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152419700_152419800
ES.20358.1	chr2	+	176	1	Intergenic	novelGene_16829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152507912	152508088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152507900_152508100
ES.20359.1	chr2	+	2822	3	FSM	ENSMUSG00000019188.17	ENSMUST00000148156.2	2769	3	-49	-4	-24	4	multi-exon	FALSE	canonical	3	150	junction_2	4.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTGTGTTTTCTCAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	152511356	152525365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152511685_152519461_152519561_152522970
ES.20359.10	chr2	+	1634	13	NNC	ENSMUSG00000019188.17	novel	1743	13	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	55.7805720858277	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152511409	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152523771_152523850_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.11	chr2	+	6031	11	NIC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	117	junction_6	15.2577848982085	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGTCTCTTCTTATTCG	NA	False	NA	NA	False	AAGAAA	-11	NA	152511433	152550589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.12	chr2	+	177	1	Intergenic	novelGene_16830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	152515567	152515744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152515600_152515700
ES.20359.13	chr2	+	1256	12	NNC	ENSMUSG00000019188.17	novel	798	2	NA	NA	-11026	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.5746296957105	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGCCTAGTGTTTCG	4474	False	NA	35	True	NA	NA	NA	152522732	152546970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152522762_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152541550_152541597_152542102_152542189_152546541
ES.20359.14	chr2	+	2529	8	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	17683	3619	-4695	15	3prime_fragment	FALSE	canonical	3	117	junction_3	17.083229633002	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152529063	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.15	chr2	+	676	2	Genic_Genomic	ENSMUSG00000042814.9	novel	912	1	NA	NA	118	-6	multi-exon	TRUE	canonical	3	34	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAAAATCGGGGTGT	NA	False	NA	95	True	AATAAA	-17	NA	152529072	152529860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_152529294_152529405
ES.20359.16	chr2	+	5274	6	NIC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	-4668	15	intron_retention	FALSE	canonical	3	140	junction_1	11.1247471881387	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152529090	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152530669_152530756_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.17	chr2	+	4781	3	NIC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	-4655	-1505	intron_retention	FALSE	canonical	3	117	junction_2	12	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCCTTTTATCTGAG	NA	False	NA	NA	False	NA	NA	NA	152529103	152536656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152530883_152531763_152531822_152533712
ES.20359.18	chr2	+	6097	8	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	17734	0	-4644	0	3prime_fragment	FALSE	canonical	3	117	junction_3	17.083229633002	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTCTCTTCTTATTCGT	NA	False	NA	NA	False	AAGAAA	-12	NA	152529114	152550590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.19	chr2	+	1683	9	Fusion	ENSMUSG00000019188.17_ENSMUSG00000042814.9	novel	798	2	NA	NA	168	15	multi-exon	FALSE	canonical	1	1	junction_7	64.9498604694421	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152529122	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_152529733_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537568_152542102_152542189_152546541
ES.20359.2	chr2	+	1576	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	9	3619	9	15	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152511389	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.20	chr2	+	5770	1	NIC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	-2867	-1500	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTATCTGAGATTGG	NA	False	NA	NA	False	NA	NA	NA	152530891	152536661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152530900_152536700
ES.20359.21	chr2	+	884	5	NNC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	1707	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.0932486246057	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTAGTGTTTCGTGC	NA	False	NA	38	True	NA	NA	NA	152535465	152546973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152535692_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.22	chr2	+	4641	3	NNC	ENSMUSG00000019188.17	novel	798	2	NA	NA	4181	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152537939	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152541714_152541751_152542189_152546541
ES.20359.23	chr2	+	3540	2	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	27698	3619	5320	15	3prime_fragment	FALSE	canonical	3	175	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTAGTGTTTCGT	NA	False	NA	36	True	NA	NA	NA	152539078	152546971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152542189_152546541
ES.20359.4	chr2	+	1564	12	NNC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	10	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.4261729632009	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGCTCTGCCTAGTGT	NA	False	NA	31	True	ATTAAA	-45	NA	152511390	152546966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537499_152542102_152542189_152546541
ES.20359.5	chr2	+	5190	12	NNC	ENSMUSG00000019188.17	novel	5204	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.7945465734488	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGTCTCTTCTTATTC	NA	False	NA	NA	False	AAGAAA	-10	NA	152511390	152550588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530584_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ES.20359.6	chr2	+	2312	4	FSM	ENSMUSG00000019188.17_ENSMUSG00000042814.9	ENSMUST00000109825.8	1063	4	-10	-1239	-8	-6	multi-exon	FALSE	canonical	3	150	junction_2	4.78423336480244	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAAAATCGGGGTGT	NA	False	NA	95	True	AATAAA	-17	NA	152511397	152529860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017
ES.20359.7	chr2	+	5327	4	NNC	ENSMUSG00000019188.17	novel	1063	4	NA	NA	-5	11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	71.9830226897673	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTTTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	152511400	152528632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152511685_152519461_152519561_152522970_152523054_152523771
ES.20359.8	chr2	+	989	3	FSM	ENSMUSG00000019188.17	ENSMUST00000148156.2	2769	3	-5	1785	-5	-1785	multi-exon	FALSE	canonical	3	150	junction_2	4.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAATGTCTCTCAGTCA	NA	False	NA	NA	False	TTTAAA	-31	NA	152511400	152523576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152511685_152519461_152519561_152522970
ES.20359.9	chr2	+	1750	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	-7	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	False	NA	21	True	ATTAAA	-35	NA	152511400	152546956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
ES.2036.1	chr1	-	180	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATAATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	180147357	180147177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180147200_180147400
ES.20360.1	chr2	+	4177	1	Intergenic	novelGene_16831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	5905	False	NA	NA	False	NA	NA	NA	152569149	152573326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152569100_152573300
ES.20361.1	chr2	+	938	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	0	-4	0	4	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTTCTTGGATGGG	4422	False	NA	17	True	ATTAAA	-21	NA	152578170	152579334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152578666_152578891
ES.20362.1	chr2	+	4775	3	Antisense	novelGene_ENSMUSG00000007659.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCCGGCCGGAGGGAT	NA	False	NA	NA	False	NA	NA	NA	152620230	152672432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152624202_152671345_152672023_152672305
ES.20362.2	chr2	+	5530	1	Intergenic	novelGene_16832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTGCGCTTCCAGG	NA	False	NA	NA	False	NA	NA	NA	152638703	152644233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152638700_152644200
ES.20363.1	chr2	+	4083	1	Antisense	novelGene_ENSMUSG00000007659.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	3162	False	NA	NA	False	NA	NA	NA	152672662	152676745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_152672700_152676700
ES.20363.10	chr2	+	2795	18	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	4	-635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	246.282955394089	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2698	False	NA	18	True	AATAAA	-17	NA	152689887	152735939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152689954_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.12	chr2	+	4167	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	-10	-674	4	7	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTGT	2698	False	NA	20	True	NA	NA	NA	152689887	152737248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.13	chr2	+	4167	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	2707	False	NA	16	True	NA	NA	NA	152689896	152737244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.14	chr2	+	3557	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	0	-74	0	74	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGCATGTGGAATTCT	2708	False	NA	NA	False	NA	NA	NA	152689897	152736648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.15	chr2	+	2877	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	1	-618	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAAGTGAGAAGCAGCC	2709	False	NA	35	True	AATAAA	-34	NA	152689898	152735956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.17	chr2	+	3034	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	29	1302	-2	-635	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2723	False	NA	18	True	AATAAA	-17	NA	152689912	152735939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.18	chr2	+	3536	17	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	1	-640	intron_retention	FALSE	canonical	3	164	junction_2	171.802473334204	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTGTGGTTTCAGTC	2726	False	NA	13	True	AATAAA	-12	NA	152689915	152735934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.19	chr2	+	7658	13	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	8	-635	intron_retention	FALSE	canonical	3	164	junction_2	192.415547852962	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2733	False	NA	18	True	AATAAA	-17	NA	152689922	152735939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152727148_152730022_152731243_152732410_152734221_152735503
ES.20363.2	chr2	+	3104	18	NNC	ENSMUSG00000027469.17	novel	733	6	NA	NA	-16518	-609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	206.051711855246	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCAGCCAGTCTATTG	3865	False	NA	44	True	AATAAA	-43	NA	152673365	152735965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152673728_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.22	chr2	+	3032	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	12	610	12	-610	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCAGCCAGTCTATT	2737	False	NA	43	True	AATAAA	-42	NA	152689926	152735964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.23	chr2	+	4313	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	12	-671	12	4	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2737	False	NA	17	True	NA	NA	NA	152689926	152737245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.25	chr2	+	3998	17	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	251.4922650401	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2741	False	NA	13	True	NA	NA	NA	152689930	152737241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.26	chr2	+	2795	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	16	-634	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	195.159929093745	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTTCAGTCACAGTG	2741	False	NA	19	True	AATAAA	-18	NA	152689930	152735940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.28	chr2	+	2803	18	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	16	-638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	243.48641279955	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2741	False	NA	15	True	AATAAA	-14	NA	152689930	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732552_152733362_152733475_152734032_152734221_152735503
ES.20363.3	chr2	+	5482	18	NNC	ENSMUSG00000027469.17	novel	733	6	NA	NA	-16495	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	206.051711855246	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	3888	False	NA	18	True	NA	NA	NA	152673388	152737246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152674848_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.33	chr2	+	3818	17	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	18	-636	intron_retention	FALSE	canonical	3	48	junction_15	201.137847243501	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2743	False	NA	17	True	AATAAA	-16	NA	152689932	152735938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.34	chr2	+	4095	18	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	235.420245606708	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2743	False	NA	17	True	NA	NA	NA	152689932	152737245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.35	chr2	+	4314	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	54	-3	23	3	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	2748	False	NA	16	True	NA	NA	NA	152689937	152737244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.38	chr2	+	2779	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	40	-638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.721077867384	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2765	False	NA	15	True	AATAAA	-14	NA	152689954	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724274_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.4	chr2	+	289	1	Intergenic	novelGene_16835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCTGCAACACCCAA	435	False	NA	NA	False	NA	NA	NA	152685767	152686056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152685800_152686100
ES.20363.40	chr2	+	2653	17	NIC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	40	-638	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	249.833163080885	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2765	False	NA	15	True	AATAAA	-14	NA	152689954	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.41	chr2	+	4261	18	NNC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	239.527750485398	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	2765	False	NA	14	True	NA	NA	NA	152689954	152737242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.43	chr2	+	2910	18	NNC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	42	-639	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	246.939200731944	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGTGGTTTCAGTCA	2767	False	NA	14	True	AATAAA	-13	NA	152689956	152735935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722997_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.44	chr2	+	2955	18	NNC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	43	-635	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	239.527750485398	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2768	False	NA	18	True	AATAAA	-17	NA	152689957	152735939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.49	chr2	+	4108	18	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	205.360363489972	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2774	False	NA	13	True	NA	NA	NA	152689963	152737241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734008_152734221_152735503
ES.20363.5	chr2	+	2923	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	-46	606	-32	-606	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCCAGTCTATTGGAT	2662	False	NA	47	True	NA	NA	NA	152689851	152735968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.50	chr2	+	2932	19	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-38	-636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	291.315370452244	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2774	False	NA	17	True	AATAAA	-16	NA	152689963	152735938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152694070_152694209_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.51	chr2	+	2443	16	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-38	-638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	257.076763287198	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2774	False	NA	15	True	AATAAA	-14	NA	152689963	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717537_152722963_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.52	chr2	+	2619	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	-37	-636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	204.633946116264	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGGTTTCAGTCACAG	2775	False	NA	17	True	AATAAA	-16	NA	152689964	152735938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718525_152722096_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.53	chr2	+	2803	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	-37	-638	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	203.470222607362	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2775	False	NA	15	True	AATAAA	-14	NA	152689964	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717435_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.54	chr2	+	4065	17	ISM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	67	634	-37	-634	intron_retention	FALSE	canonical	3	597	junction_2	69.832724241576	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTTCAGTCACAGTG	2775	False	NA	19	True	AATAAA	-18	NA	152689964	152735940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032
ES.20363.55	chr2	+	2773	18	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-37	-635	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	237.074835249654	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTTTCAGTCACAGT	2775	False	NA	18	True	AATAAA	-17	NA	152689964	152735939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.59	chr2	+	4023	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	204.415700342984	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	2775	False	NA	16	True	NA	NA	NA	152689964	152737244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722997_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.6	chr2	+	5169	17	NIC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-17	-637	intron_retention	FALSE	canonical	3	176	junction_2	169.345327197859	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGTTTCAGTCACA	2677	False	NA	16	True	AATAAA	-15	NA	152689866	152735937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696923_152709106_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.60	chr2	+	3908	17	NIC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	-37	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	210.39572090468	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	2775	False	NA	15	True	NA	NA	NA	152689964	152737243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.63	chr2	+	4077	18	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-35	4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	237.074835249654	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	2777	False	NA	17	True	NA	NA	NA	152689966	152737245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
ES.20363.64	chr2	+	4791	17	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-34	0	intron_retention	FALSE	canonical	3	164	junction_2	171.802473334204	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2778	False	NA	13	True	NA	NA	NA	152689967	152737241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.65	chr2	+	4203	18	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	246.939200731944	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2780	False	NA	13	True	NA	NA	NA	152689969	152737241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722997_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.66	chr2	+	3618	14	NNC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	276.867045613496	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2783	False	NA	13	True	NA	NA	NA	152689972	152737241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711621_152722997_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.67	chr2	+	1820	11	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	-28	-638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.111778111732	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2784	False	NA	15	True	AATAAA	-14	NA	152689973	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690030_152722997_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.68	chr2	+	1858	11	NNC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	-19	-637	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	312.136124150986	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTGGTTTCAGTCACA	2793	False	NA	16	True	AATAAA	-15	NA	152689982	152735937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152690218_152696840_152696923_152724248_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.70	chr2	+	6030	16	NIC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	28	-638	intron_retention	FALSE	canonical	3	159	junction_1	181.788472926335	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2840	False	NA	15	True	AATAAA	-14	NA	152690029	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152733475_152734032_152734221_152735503
ES.20363.71	chr2	+	2665	16	ISM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	19185	608	-2421	-608	3prime_fragment	FALSE	canonical	3	648	junction_4	73.276159530611	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGCCAGTCTATTGG	NA	False	NA	45	True	AATAAA	-44	NA	152709099	152735966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.72	chr2	+	2336	14	ISM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	25093	638	3487	-638	3prime_fragment	FALSE	canonical	3	648	junction_2	77.9699532478214	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	NA	False	NA	15	True	AATAAA	-14	NA	152715007	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.73	chr2	+	197	1	Intergenic	novelGene_16838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	717	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTATTAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	152719313	152719510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152719300_152719500
ES.20363.74	chr2	+	3139	10	ISM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	33048	-4	-1257	4	3prime_fragment	FALSE	canonical	3	736	junction_6	72.8010988928052	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	17	True	NA	NA	NA	152722931	152737245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.75	chr2	+	6499	7	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	-18	3	intron_retention	FALSE	canonical	3	736	junction_3	81.1283277009674	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	16	True	NA	NA	NA	152724170	152737244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152724283_152726093_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20363.8	chr2	+	2644	17	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	4	-638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.089939351907	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGTGGTTTCAGTCAC	2698	False	NA	15	True	AATAAA	-14	NA	152689887	152735936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152689954_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ES.20364.1	chr2	-	2410	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	11	-4	-7	4	multi-exon	FALSE	canonical	3	148	junction_2	89.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152673637	152622583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152624203_152671346_152672023_152673522
ES.20364.10	chr2	-	2404	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	160	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCACAGCCTTGGCTCTG	NA	False	NA	-8	True	AATAAA	-19	NA	152672222	152622590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152624203_152671346_152672023_152672106
ES.20364.11	chr2	-	2406	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	154.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCACAGCCTTGGCTCT	NA	False	NA	-9	True	AATAAA	-18	NA	152672579	152622591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152624203_152671346_152672023_152672460
ES.20364.13	chr2	-	2344	3	NNC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	161.5	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCACAGCCTTGGCTCT	NA	False	NA	-9	True	AATAAA	-18	NA	152672580	152622591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152671346_152672023_152672523
ES.20364.14	chr2	-	2285	4	NNC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.086641644085	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGAACCACAGCCTT	NA	False	NA	-15	True	AATAAA	-12	NA	152672568	152622597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152671346_152671863_152671966_152672023_152672460
ES.20364.15	chr2	-	2077	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	83	257	65	-253	multi-exon	FALSE	canonical	3	148	junction_2	89.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGCGTGTCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	152673565	152622844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152624203_152671346_152672023_152673522
ES.20364.16	chr2	-	3899	1	Intergenic	novelGene_16833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTCATTTTGCATGAT	6554	False	NA	NA	False	NA	NA	NA	152647769	152643870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152643900_152647800
ES.20364.17	chr2	-	5573	2	ISM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	25	43963	7	3496	5prime_fragment	FALSE	canonical	3	148	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACCTGAGTTTGATCAC	NA	False	NA	NA	False	NA	NA	NA	152673623	152666550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152672023_152673522
ES.20364.2	chr2	-	2645	3	NIC	ENSMUSG00000007659.19	novel	2568	3	NA	NA	-51	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	150.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152672637	152622583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152624203_152671346_152672041_152672305
ES.20364.3	chr2	-	3231	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-655	-8	-209	4	multi-exon	FALSE	canonical	3	144	junction_2	91.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152673241	152622583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152624203_152671346_152672023_152672305
ES.20364.4	chr2	-	2405	3	NNC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	163.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152673621	152622583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152671346_152672043_152673531
ES.20364.5	chr2	-	2433	3	NNC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	85	4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	160.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGCTCTGCGCCGCA	NA	False	NA	-1	True	AATAAA	-26	NA	152673545	152622583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152671346_152672023_152673407
ES.20364.6	chr2	-	2414	3	NIC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	148	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	False	NA	-7	True	AATAAA	-20	NA	152673629	152622589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152624203_152671346_152672041_152673522
ES.20364.7	chr2	-	1909	3	NNC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	16820	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	688	False	NA	-7	True	AATAAA	-20	NA	152653635	152622589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152627624_152627870_152653584
ES.20364.9	chr2	-	2537	4	NNC	ENSMUSG00000007659.19	novel	2417	3	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.29983164553722	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	False	NA	-7	True	AATAAA	-20	NA	152672276	152622589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152624203_152656482_152656561_152671346_152672023_152672106
ES.20365.1	chr2	-	154	1	Intergenic	novelGene_16834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	4992	False	NA	NA	False	NA	NA	NA	152681818	152681664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152681700_152681800
ES.20366.1	chr2	-	179	1	Intergenic	novelGene_16836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTCCACTTC	NA	False	NA	NA	False	NA	NA	NA	152687729	152687550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152687600_152687700
ES.20367.1	chr2	-	172	1	Intergenic	novelGene_16837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATGTCAA	NA	False	NA	NA	False	NA	NA	NA	152695932	152695760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152695800_152695900
ES.20368.1	chr2	-	3515	6	NNC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-12	3702	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	99.751691714978	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATTAAAAACAAC	8677	False	NA	NA	False	TTTAAA	-10	NA	152857309	152847107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152850125_152851546_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ES.20368.10	chr2	-	4805	3	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	241	junction_1	15	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAGCTCTGAGTTGT	8695	False	NA	NA	False	AATAAA	-13	NA	152857291	152850817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152851657_152852177_152856006_152857153
ES.20368.11	chr2	-	1269	6	NNC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	120.409966364915	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAACAGCTCTGAGT	8721	False	NA	NA	False	AATAAA	-10	NA	152857265	152850820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_152851657_152852177_152852259_152854300_152854376_152855138_152855228_152855929_152856006_152857153
ES.20368.12	chr2	-	6487	1	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-10	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAACAGCTCTGAGT	8679	False	NA	NA	False	AATAAA	-10	NA	152857307	152850820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152850800_152857300
ES.20368.13	chr2	-	1721	4	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	1	-11	intron_retention	FALSE	canonical	3	235	junction_1	14.9666295470958	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAACAGCTCTGAGT	8701	False	NA	NA	False	AATAAA	-10	NA	152857285	152850820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152852259_152854300_152854376_152855929_152856006_152857153
ES.20368.14	chr2	-	1221	5	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	97.0875893201598	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAACAGCTCTGAGT	8725	False	NA	NA	False	AATAAA	-10	NA	152857261	152850820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856051_152857153
ES.20368.16	chr2	-	675	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	53	545	3	35	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGGCAGCTGTCAGT	8692	False	NA	NA	False	NA	NA	NA	152857294	152851354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ES.20368.17	chr2	-	588	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	34	651	-16	-71	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATCTTTTTCTGTAGTG	8673	False	NA	NA	False	NA	NA	NA	152857313	152851460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ES.20368.2	chr2	-	4460	2	ISM	ENSMUSG00000027472.15	ENSMUST00000140853.2	441	5	-26	-1402	-15	-1	intron_retention	FALSE	canonical	3	235	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8674	False	NA	NA	False	AATAAA	-20	NA	152857312	152850810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152852259_152854300
ES.20368.3	chr2	-	3222	4	NIC	ENSMUSG00000027472.15	novel	1299	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	7	junction_3	108.921990433521	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8689	False	NA	NA	False	AATAAA	-20	NA	152857297	152850810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152851657_152852177_152852259_152854300_152855228_152855929
ES.20368.4	chr2	-	5955	2	ISM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	61	1	0	-1	intron_retention	FALSE	canonical	3	241	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8700	False	NA	NA	False	AATAAA	-20	NA	152857286	152850810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_152851657_152852177
ES.20368.5	chr2	-	3934	3	FSM	ENSMUSG00000027472.15	ENSMUST00000151392.2	458	3	-2897	-579	-10	-1	multi-exon	FALSE	canonical	3	235	junction_2	3	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGAGTTGTCACCCAC	8679	False	NA	NA	False	AATAAA	-20	NA	152857307	152850810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152851657_152852177_152852259_152854300
ES.20368.6	chr2	-	2785	4	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	235	junction_2	15.7480157480236	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTGAGTTGTCACCCA	8679	False	NA	NA	False	AATAAA	-19	NA	152857307	152850811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152851657_152852177_152852259_152854300_152856006_152857153
ES.20368.7	chr2	-	1236	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	34	3	-16	-3	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCTGAGTTGTCACCC	8673	False	NA	NA	False	AATAAA	-18	NA	152857313	152850812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ES.20368.8	chr2	-	1259	5	FSM	ENSMUSG00000027472.15	ENSMUST00000150545.8	1299	5	36	4	-14	-4	multi-exon	FALSE	canonical	1	2	junction_4	103.576964137785	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTCTGAGTTGTCACC	8675	False	NA	NA	False	AATAAA	-17	NA	152857311	152850813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857127
ES.20368.9	chr2	-	3296	3	NIC	ENSMUSG00000027472.15	novel	1273	5	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	235	junction_1	18	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAGCTCTGAGTTGT	8683	False	NA	NA	False	AATAAA	-13	NA	152857303	152850817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_152852259_152854300_152856006_152857153
ES.20369.1	chr2	+	4317	1	Intergenic	novelGene_16839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTGTGTCCTGTTTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	152897895	152902212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152897900_152902200
ES.2037.1	chr1	+	6204	8	FSM	ENSMUSG00000038855.11	ENSMUST00000070181.7	6235	8	31	0	31	0	multi-exon	FALSE	canonical	1	1	junction_4	2.77010277566647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGATGTGATCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	180158080	180252367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180158345_180159676_180161796_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239
ES.2037.2	chr1	+	4490	8	FSM	ENSMUSG00000038855.11	ENSMUST00000070181.7	6235	8	64	1681	64	-1681	multi-exon	FALSE	canonical	1	1	junction_4	2.77010277566647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCTGGGCTTATCACC	NA	False	NA	NA	False	TTTAAA	-43	NA	180158113	180250686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180158345_180159676_180161796_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239
ES.2037.3	chr1	+	2409	2	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	1093	-3959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGTGAGCAGAGATG	NA	False	NA	NA	False	AATAAA	-15	NA	180159142	180162064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180159164_180159676
ES.2037.4	chr1	+	3840	8	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	24448	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.24509048331444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGCTTGATGTGATCC	NA	False	NA	NA	False	AATAAA	-14	NA	180185878	180252364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180185946_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239_180250324_180250368
ES.2037.5	chr1	+	4085	7	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	48355	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.33749739908346	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGCTTGATGTGATCC	9978	False	NA	NA	False	AATAAA	-14	NA	180209785	180252364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180210053_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239
ES.2037.6	chr1	+	3814	9	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	48459	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.24037034920393	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCTTGATGTGATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	180209889	180252366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180210053_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239_180250324_180250368_180251040_180251163
ES.2037.7	chr1	+	3934	8	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	48464	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.36852174930046	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGATGTGATCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	180209894	180252367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180210053_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239_180250309_180250353
ES.2037.8	chr1	+	3904	8	NNC	ENSMUSG00000038855.11	novel	6235	8	NA	NA	48491	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.24509048331444	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGCTTGATGTGATCC	NA	False	NA	NA	False	AATAAA	-14	NA	180209921	180252364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180210053_180240238_180240339_180241351_180241566_180245718_180245924_180247822_180247925_180248839_180248912_180249239_180250324_180250368
ES.2037.9	chr1	+	3301	3	ISM	ENSMUSG00000038855.11	ENSMUST00000070181.7	6235	8	89771	3	86390	-3	3prime_fragment	FALSE	canonical	3	6	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGCTTGATGTGATCC	NA	False	NA	NA	False	AATAAA	-14	NA	180247820	180252364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180247925_180248839_180248912_180249239
ES.20370.1	chr2	-	172	1	Intergenic	novelGene_16840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAACCCCACAAATACT	NA	False	NA	NA	False	NA	NA	NA	152904880	152904708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_152904700_152904900
ES.20371.1	chr2	+	5415	12	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-911	-5	intron_retention	FALSE	canonical	0	0	junction_1	31.0754879352396	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAGGGTCAGCTTCTC	NA	False	NA	12	True	AATAAA	-22	NA	152949476	152993354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152949527_152949855_152949942_152966089_152966208_152970182_152971063_152971763_152971863_152973140_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ES.20371.2	chr2	+	2160	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-804	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGTCAGCTTCTCTGTC	NA	False	NA	16	True	AATAAA	-26	NA	152949583	152993358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ES.20371.3	chr2	+	2271	13	FSM	ENSMUSG00000003283.16	ENSMUST00000109799.8	2092	13	-161	-18	-161	18	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAATGTGTTGGCCTTTCT	NA	False	NA	37	True	NA	NA	NA	152950226	152993379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ES.20371.4	chr2	+	2049	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	13	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	25.87295348858	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGCTTTCCCCAAGGG	NA	False	NA	2	True	AATAAA	-12	NA	152950400	152993344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986488_152990874_152990999_152992866
ES.20371.5	chr2	+	4825	12	NIC	ENSMUSG00000003283.16	novel	2092	13	NA	NA	13	2	intron_retention	FALSE	canonical	3	76	junction_8	8.40011806292473	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTCTCTGTCTCCAA	NA	False	NA	21	True	AATAAA	-31	NA	152950400	152993363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ES.20371.7	chr2	+	4515	6	NIC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	22822	-8	intron_retention	FALSE	canonical	3	76	junction_2	5.67802782663136	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCCCAAGGGTCAGCTT	5266	False	NA	9	True	AATAAA	-19	NA	152973209	152993351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ES.20371.8	chr2	+	4872	2	NIC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	24346	-11833	intron_retention	FALSE	canonical	3	90	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6790	False	NA	NA	False	NA	NA	NA	152974733	152981526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_152976697_152978617
ES.20371.9	chr2	+	279	1	Intergenic	novelGene_16841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	152982565	152982844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_152982600_152982800
ES.20372.1	chr2	+	3904	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	-5	-3	-5	3	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTGCGGATTGAAGTGT	NA	False	NA	44	True	AATAAA	-33	NA	153003217	153052389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.11	chr2	+	5859	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-2	-10	intron_retention	FALSE	canonical	3	350	junction_1	55.2403484216926	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTCGAATGCAAGGGTG	NA	False	NA	31	True	AATAAA	-20	NA	153003458	153052376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.12	chr2	+	3751	19	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	167.16253087458	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003458	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036338_153036505_153036591_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.13	chr2	+	1989	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-2	-1607	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	134.866122854296	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGCACAGTGTTCC	NA	False	NA	21	True	AATAAA	-25	NA	153003458	153050779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153045701_153045822_153046454_153046545_153050526
ES.20372.16	chr2	+	3590	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	134.866122854296	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153003458	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153045701_153045822_153046454_153046545_153050526
ES.20372.17	chr2	+	3507	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	2	14	junction_6	131.590970791122	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153003458	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.18	chr2	+	3613	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	125.998846592183	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003459	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029226_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.19	chr2	+	3333	16	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.142746172168	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003460	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003496_153029294_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.2	chr2	+	3819	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_17	128.519517723909	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003217	153052386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050608
ES.20372.20	chr2	+	3742	19	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	211.9437163232	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003461	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020805_153020923_153021420_153021534_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.21	chr2	+	2154	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	239	1503	1	-1503	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGGTTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	153003461	153050883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.22	chr2	+	3715	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	129.989086579442	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003461	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040209_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.24	chr2	+	5962	16	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-5	intron_retention	FALSE	canonical	3	350	junction_1	57.0478941085666	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATGCAAGGGTGCGGAT	NA	False	NA	36	True	AATAAA	-25	NA	153003461	153052381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.25	chr2	+	3630	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	130.842042701909	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153003461	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042718_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.26	chr2	+	3848	20	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.000019880978	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003463	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153022489_153022600_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153036505_153036591_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.27	chr2	+	3758	19	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	164.761631036259	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003463	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153022493_153022600_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.29	chr2	+	3388	16	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.518285997032	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGGTCCAATTGTAAAT	NA	False	NA	-11	True	ATTAAA	-21	NA	153003463	153052334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153033833_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.3	chr2	+	3351	16	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.142746172168	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	33	True	AATAAA	-22	NA	153003222	153052378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003283_153029296_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.30	chr2	+	3320	15	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	181.452079466886	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	33	True	AATAAA	-22	NA	153003463	153052378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.31	chr2	+	3570	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-1	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	172.596455155313	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTTCTGGTCCAA	NA	False	NA	9	True	ATTAAA	-13	NA	153003466	153052326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029569_153030873_153030991_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.32	chr2	+	3636	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	130.684860913467	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003466	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042575_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.33	chr2	+	3619	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	129.835669359627	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	33	True	AATAAA	-22	NA	153003467	153052378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045798_153046454_153046545_153050526
ES.20372.34	chr2	+	3629	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	130.640530069676	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTCGAATGCAAGG	NA	False	NA	28	True	AATAAA	-17	NA	153003467	153052373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029459_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.35	chr2	+	3648	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	128.831640894237	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTCGAATGCAAGGGTG	NA	False	NA	31	True	AATAAA	-20	NA	153003467	153052376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033928_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.36	chr2	+	3705	19	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	194.427118275686	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003467	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153036505_153036591_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.37	chr2	+	3618	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	128.227630639873	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAATGCAAGGGTGCGGAT	NA	False	NA	36	True	AATAAA	-25	NA	153003467	153052381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.39	chr2	+	3700	19	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	168.014705779062	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003467	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153031192_153031244_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.4	chr2	+	2084	19	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-10	-1607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	168.014705779062	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGCACAGTGTTCC	NA	False	NA	21	True	AATAAA	-25	NA	153003450	153050779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030970_153031192_153031244_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.41	chr2	+	2034	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-1609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	129.835669359627	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCCTGGCACAGTGTT	NA	False	NA	19	True	AATAAA	-23	NA	153003468	153050777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046461_153046545_153050526
ES.20372.42	chr2	+	2037	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-1620	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	128.831640894237	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGAATGTAACTCCT	NA	False	NA	8	True	AATAAA	-12	NA	153003468	153050766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033928_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.43	chr2	+	2022	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-1607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	130.842042701909	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGCACAGTGTTCC	NA	False	NA	21	True	AATAAA	-25	NA	153003468	153050779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042718_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.44	chr2	+	5165	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-4	intron_retention	FALSE	canonical	3	350	junction_1	55.1293932489738	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCAAGGGTGCGGATT	NA	False	NA	37	True	AATAAA	-26	NA	153003468	153052382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.47	chr2	+	4546	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-8	intron_retention	FALSE	canonical	3	15	junction_1	127.190310165515	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	False	NA	33	True	AATAAA	-22	NA	153003468	153052378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.48	chr2	+	3533	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	124.267152777858	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153003468	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029296_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.5	chr2	+	2061	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	228	1607	-10	-1607	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGCACAGTGTTCC	NA	False	NA	21	True	AATAAA	-25	NA	153003450	153050779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.50	chr2	+	3755	19	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	162.677595261302	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153003470	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153021420_153021534_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.51	chr2	+	2292	1	Intergenic	novelGene_16842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCCAGAAAGCTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	153009685	153011977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153009700_153012000
ES.20372.52	chr2	+	212	1	Intergenic	novelGene_16843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGAGGCAGGAAGGT	674	False	NA	NA	False	NA	NA	NA	153015280	153015492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153015300_153015500
ES.20372.53	chr2	+	2021	17	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	17585	1607	-11511	-1607	3prime_fragment	FALSE	canonical	3	460	junction_5	37.7110208526632	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGGCACAGTGTTCC	6201	False	NA	21	True	AATAAA	-25	NA	153020807	153050779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.54	chr2	+	3563	17	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-11511	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	174.80264541405	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTTCTGGTCCAAT	6201	False	NA	10	True	ATTAAA	-14	NA	153020807	153052327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037484_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046541_153050526
ES.20372.55	chr2	+	3411	15	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	25959	3	-3137	-3	3prime_fragment	FALSE	canonical	3	460	junction_3	28.0285022570866	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	NA	False	NA	38	True	AATAAA	-27	NA	153029181	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.56	chr2	+	5998	11	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-376	-6	intron_retention	FALSE	canonical	3	469	junction_5	28.9525473836069	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153031942	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.57	chr2	+	2985	12	ISM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	29527	3	-96	-3	3prime_fragment	FALSE	canonical	3	469	junction_5	27.6235017917655	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAAGGGTGCGGATTG	750	False	NA	38	True	AATAAA	-27	NA	153032749	153052383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.58	chr2	+	4001	4	NIC	ENSMUSG00000068040.11	novel	2705	5	NA	NA	82	-2	intron_retention	FALSE	canonical	3	486	junction_3	26.3185612575358	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153042249	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153042739_153044257_153045822_153046454_153046545_153050526
ES.20372.59	chr2	+	4372	1	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	3898	-63	mono-exon	FALSE	NA	NA	NA	NA	NA	576	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATGCCTTTTTCTGGTC	NA	False	NA	6	True	ATTAAA	-10	NA	153047951	153052323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153048000_153052300
ES.20372.6	chr2	+	4051	21	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	218.330254431217	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGGGTGCGGATTGA	NA	False	NA	39	True	AATAAA	-28	NA	153003455	153052384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153021420_153021534_153021641_153021829_153024307_153024408_153026835_153026926_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.7	chr2	+	3573	17	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	133.717621665022	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGCAAGGGTGCGGA	NA	False	NA	35	True	AATAAA	-24	NA	153003455	153052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ES.20372.9	chr2	+	2229	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	-3	7880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	130.878691290485	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATAAAGTTATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	153003457	153060266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153059838
ES.20373.1	chr2	-	4819	2	Antisense	novelGene_ENSMUSG00000068040.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5459	False	NA	NA	False	TATAAA	-16	NA	153009905	153004750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_153005542_153005877
ES.20374.1	chr2	-	4568	1	Antisense	novelGene_ENSMUSG00000068040.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153036043	153031475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_153031500_153036000
ES.20375.1	chr2	-	1646	1	Antisense	novelGene_ENSMUSG00000068040.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCACGCGTGTGCACA	NA	False	NA	NA	False	NA	NA	NA	153040641	153038995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_153039000_153040600
ES.20376.1	chr2	-	3054	1	FSM	ENSMUSG00000074671.7	ENSMUST00000099194.4	3072	1	15	3	15	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGGTCATATTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	153067346	153064292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153064300_153067300
ES.20377.1	chr2	+	175	1	Intergenic	novelGene_16844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	6905	False	NA	NA	False	NA	NA	NA	153076124	153076299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153076100_153076300
ES.20378.1	chr2	+	3274	6	NNC	ENSMUSG00000046020.14	novel	4833	3	NA	NA	-1193	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.7335933429427	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGGAGTGTTTCATA	NA	False	NA	NA	False	AATAGA	-22	NA	153082259	153109989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153082427_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.10	chr2	+	1850	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-45	3795	-45	-51	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGCCTAAAGTGACCT	NA	False	NA	NA	False	TTTAAA	-21	NA	153083407	153108372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.11	chr2	+	6417	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-39	-778	-39	778	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAATGGGTCCATAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	153083413	153112945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.12	chr2	+	2572	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-32	3060	-32	-99	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGTGTAACTGTTGCTT	NA	False	NA	6	True	NA	NA	NA	153083420	153109107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.13	chr2	+	6248	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-23	-625	-23	625	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGAGTCATAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	153083429	153112792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.14	chr2	+	2109	7	FSM	ENSMUSG00000046020.14	ENSMUST00000099192.10	1385	7	-36	-688	-18	688	multi-exon	FALSE	canonical	1	1	junction_6	37.4596078759805	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGTAAAAATGGTTCAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	153083434	153104510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153103466
ES.20378.15	chr2	+	5339	6	NIC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	95	junction_3	7.52595508889071	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCCACTGAGGAGTGT	NA	False	NA	NA	False	AATAGA	-16	NA	153083441	153109983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.16	chr2	+	3573	6	NIC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	-1	-98	intron_retention	FALSE	canonical	3	95	junction_3	7.44043009509531	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTGTAACTGTTGCTTA	NA	False	NA	7	True	NA	NA	NA	153083469	153109108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153083646_153085557_153085680_153090368_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.17	chr2	+	1487	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	23	4090	5	245	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATATATGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	153083475	153108077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.18	chr2	+	5744	8	NNC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.2889511192539	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083480	153112167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153083646_153085557_153085680_153090065_153090238_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.2	chr2	+	3278	7	NNC	ENSMUSG00000046020.14	novel	4833	3	NA	NA	-1182	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5094925302768	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATGTCTTGGGTTTTG	NA	False	NA	NA	False	TTTAAA	-34	NA	153082270	153109882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153082427_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.20	chr2	+	3173	8	NNC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	3	-164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	36.8604649665603	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTATTTCAGTCTC	NA	False	NA	NA	False	AAGAAA	-23	NA	153083491	153109819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614_153107736_153107775
ES.20378.21	chr2	+	5415	6	ISM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	2103	-6	2058	6	3prime_fragment	FALSE	canonical	3	95	junction_3	7.52595508889071	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCTTCATAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	153085555	153112173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.22	chr2	+	5322	3	FSM	ENSMUSG00000046020.14	ENSMUST00000152390.2	4833	3	-590	101	-500	-101	multi-exon	FALSE	canonical	3	101	junction_1	8	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATGTCTTGGGTTTTG	NA	False	NA	NA	False	TTTAAA	-34	NA	153098901	153109882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153101713_153103117_153103361_153107614
ES.20378.23	chr2	+	6181	3	FSM	ENSMUSG00000046020.14	ENSMUST00000152390.2	4833	3	834	-2182	834	-2	multi-exon	FALSE	canonical	3	101	junction_1	8	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAATGCATGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	153100325	153112165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153101713_153103117_153103361_153107614
ES.20378.24	chr2	+	4578	4	NNC	ENSMUSG00000046020.14	novel	4833	3	NA	NA	2156	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.7966107857347	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCTTCATAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	153101647	153112173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153101713_153103117_153103361_153107614_153109876_153110164
ES.20378.25	chr2	+	920	1	ISM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	27308	487	11269	-487	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTGGTTTGGTTTGC	2245	False	NA	NA	False	NA	NA	NA	153110760	153111680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153110800_153111700
ES.20378.26	chr2	+	2434	1	Genic_Genomic	ENSMUSG00000046020.14	novel	NA	NA	NA	NA	12398	2156	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTTGCTGCTGTTTT	3374	False	NA	NA	False	AGTAAA	-13	NA	153111889	153114323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_153111900_153114300
ES.20378.3	chr2	+	3379	7	NNC	ENSMUSG00000046020.14	novel	4833	3	NA	NA	-1172	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5094925302768	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTGTTTCATAGTTT	NA	False	NA	NA	False	AATAGA	-26	NA	153082280	153109993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153082427_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.4	chr2	+	5748	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-142	-6	-142	6	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCCTTCATAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	153083310	153112173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.5	chr2	+	3535	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-106	2171	-106	13	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTTTCATAGTTTGTG	NA	False	NA	NA	False	AATAGA	-29	NA	153083346	153109996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.6	chr2	+	3392	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-69	2277	-69	-93	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTTTTGTTTTTGTT	NA	False	NA	NA	False	TTTAAA	-42	NA	153083383	153109890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.7	chr2	+	8367	6	NIC	ENSMUSG00000046020.14	novel	5600	7	NA	NA	-69	786	intron_retention	FALSE	canonical	3	95	junction_3	7.52595508889071	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTCCATAGGTAAAATTC	NA	False	NA	NA	False	ATTAAA	-20	NA	153083383	153112953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.8	chr2	+	3709	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-50	1941	-50	243	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGCTAGTTCATTTAC	NA	False	NA	NA	False	TTTAAA	-31	NA	153083402	153110226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20378.9	chr2	+	3943	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	-48	1705	-48	479	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAGTGCTAACTGAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	153083404	153110462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ES.20379.1	chr2	-	5446	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	40	-1	40	1	multi-exon	FALSE	canonical	3	22	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAACTTGTTTATTTG	7344	False	NA	2	True	ATTAAA	-25	NA	153083306	153069677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153074640_153077719_153078093_153083195
ES.20379.2	chr2	-	1978	2	NNC	ENSMUSG00000051413.18	novel	5485	3	NA	NA	8048	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGCAGTTTTGAACTT	NA	False	NA	-7	True	ATTAAA	-16	NA	153071780	153069686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153071422_153071537
ES.20379.3	chr2	-	3688	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	26	1771	26	-1758	multi-exon	FALSE	canonical	3	22	junction_1	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATCAGACTATGTGAT	7330	False	NA	NA	False	TATAAA	-15	NA	153083320	153071449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153074640_153077719_153078093_153083195
ES.20379.4	chr2	-	8408	1	NIC	ENSMUSG00000051413.18	novel	5485	3	NA	NA	98	-5149	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCAGTGCTGCTAAGAGT	7402	False	NA	NA	False	NA	NA	NA	153083248	153074840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153074800_153083200
ES.2038.1	chr1	-	1953	2	FSM	ENSMUSG00000055676.5	ENSMUST00000050581.4	1328	2	-626	1	-626	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	NA	False	AATAAA	-14	NA	180158741	180154535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180155797_180158049
ES.2038.2	chr1	-	3526	8	NNC	ENSMUSG00000055676.5	novel	1328	2	NA	NA	-91518	-3286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGGTTGAGGGAGGAG	6666	False	NA	NA	False	TTTAAA	-14	NA	180249633	180158024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180158343_180159674_180161795_180240237_180240337_180241349_180241564_180245716_180245922_180247820_180247924_180248838_180248910_180249237
ES.20380.1	chr2	-	2274	1	Intergenic	novelGene_16845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	2212	False	NA	NA	False	NA	NA	NA	153088438	153086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153086200_153088400
ES.20381.1	chr2	-	225	1	Intergenic	novelGene_16846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGATTCTGCTTTTTCTT	NA	False	NA	NA	False	AAAAAG	-14	NA	153123561	153123336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153123300_153123600
ES.20382.1	chr2	+	5643	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	-8	0	-8	0	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	7805	False	NA	10	True	AATAAA	-29	NA	153133324	153175310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ES.20382.10	chr2	+	5539	8	ISM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	24802	6	24802	-6	3prime_fragment	FALSE	canonical	3	31	junction_1	4.89064079103534	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGAGGTGTCCTTGTC	NA	False	NA	4	True	AATAAA	-23	NA	153158134	153175304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ES.20382.11	chr2	+	5176	7	ISM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	25479	0	25479	0	intron_retention	FALSE	canonical	3	31	junction_1	5.02217305777312	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	NA	False	NA	10	True	AATAAA	-29	NA	153158811	153175310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491
ES.20382.2	chr2	+	3148	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	3	2484	3	-2484	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTCACTTTACTCAT	7816	False	NA	NA	False	TATAAA	-18	NA	153133335	153172826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ES.20382.4	chr2	+	5730	10	NNC	ENSMUSG00000027475.10	novel	5635	9	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.0900245148629	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGTGTCCTTGTCAGT	7836	False	NA	7	True	AATAAA	-26	NA	153133355	153175307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153133425_153146668_153146790_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ES.20382.6	chr2	+	5831	9	NNC	ENSMUSG00000027475.10	novel	5635	9	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.1095146744645	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGAGGTGTCCTTGTC	7844	False	NA	4	True	AATAAA	-23	NA	153133363	153175304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165223_153165563_153171491_153171671_153171978
ES.20382.7	chr2	+	3145	8	NNC	ENSMUSG00000027475.10	novel	5635	9	NA	NA	31	-6331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.1909059582729	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATCTCAACATGTAATT	7844	False	NA	NA	False	NA	NA	NA	153133363	153168979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153167927
ES.20382.8	chr2	+	3949	3	NNC	ENSMUSG00000027475.10	novel	5635	9	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	7844	False	NA	10	True	AATAAA	-29	NA	153133363	153175310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153133425_153158136_153159089_153172374
ES.20382.9	chr2	+	155	1	Intergenic	novelGene_16848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTTAAAA	2755	False	NA	NA	False	NA	NA	NA	153150242	153150397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153150200_153150400
ES.20383.1	chr2	-	174	1	Intergenic	novelGene_16847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	153148973	153148799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153148800_153149000
ES.20384.1	chr2	+	4009	1	Antisense	novelGene_ENSMUSG00000073236.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	153183704	153187713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_153183700_153187700
ES.20384.10	chr2	+	7055	11	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	53.7576971232957	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCTTGTCATCTGT	NA	False	NA	7	True	AATAAA	-16	NA	153187752	153245927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.11	chr2	+	5132	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	4	-1907	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.3774688228404	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGTGTGTATTTTA	NA	False	NA	22	True	AATAAA	-24	NA	153187752	153244020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153189900_153189960_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.12	chr2	+	5481	11	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	8	-1909	intron_retention	FALSE	non_canonical	0	0	junction_2	54.2236110933235	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153187756	153244018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.14	chr2	+	6975	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.4991900773968	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	NA	False	NA	6	True	AATAAA	-15	NA	153187762	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235714_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.15	chr2	+	7048	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.2298606422637	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	3	True	AATAAA	-12	NA	153187762	153245923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198610_153198696_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.16	chr2	+	7206	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.3525320143593	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	NA	False	NA	6	True	AATAAA	-15	NA	153187762	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153189900_153189985_153193955_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.17	chr2	+	7070	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.7779659010263	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	NA	False	NA	6	True	AATAAA	-15	NA	153187762	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153223007_153223109_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.18	chr2	+	6646	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-2	-324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.8797082897678	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTCTCATTTTCTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	153187762	153245603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.19	chr2	+	5691	9	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-2	-1909	intron_retention	FALSE	non_canonical	0	0	junction_2	53.8951528432752	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153187762	153244018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.2	chr2	+	7024	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.8797082897678	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTCCTTGTCATCTGTG	NA	False	NA	8	True	AATAAA	-17	NA	153187710	153245928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194196_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.21	chr2	+	5161	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	0	-1908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.7779659010263	295	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTGTGTGTATTTT	NA	False	NA	21	True	AATAAA	-23	NA	153187764	153244019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153223007_153223109_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.23	chr2	+	5129	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	0	-1909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.1776757093461	295	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153187764	153244018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153191452_153191523_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.24	chr2	+	6077	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	1	-949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.3774688228404	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACGTCTTCAGCACCC	NA	False	NA	NA	False	NA	NA	NA	153187765	153244978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153189900_153189960_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.25	chr2	+	2981	3	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	9	2249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGACTGCTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	153187773	153201347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986
ES.20384.26	chr2	+	6705	11	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	14	-324	intron_retention	FALSE	non_canonical	0	0	junction_2	53.7576971232957	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTCTCATTTTCTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	153187778	153245603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.27	chr2	+	5117	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	16	-1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.2298606422637	294	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTACATTTAGTGT	NA	False	NA	12	True	AATAAA	-14	NA	153187780	153244010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198610_153198696_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.28	chr2	+	4964	11	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	170	-1909	intron_retention	FALSE	non_canonical	0	0	junction_2	53.7576971232957	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153187934	153244018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.29	chr2	+	5443	9	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	200	-1908	intron_retention	FALSE	non_canonical	0	0	junction_2	55.4769096111166	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTGTGTGTATTTT	NA	False	NA	21	True	AATAAA	-23	NA	153187964	153244019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233743_153234760_153235422_153235543_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.30	chr2	+	6943	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	200	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	73.3588485539204	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	NA	False	NA	6	True	AATAAA	-15	NA	153187964	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153223007_153223109_153233448_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.31	chr2	+	6535	11	NIC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	317	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	54.3828097839749	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	3	True	AATAAA	-12	NA	153188081	153245923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153188311_153194108_153194192_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.32	chr2	+	6684	13	NNC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	339	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.3774688228404	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	3	True	AATAAA	-12	NA	153188103	153245923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153189900_153189960_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.33	chr2	+	6690	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	653	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.7356338200143	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTCCTTGTCATC	NA	False	NA	4	True	AATAAA	-13	NA	153188417	153245924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188689_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.34	chr2	+	6620	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	815	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.7356338200143	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	3	True	AATAAA	-12	NA	153188579	153245923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188782_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.35	chr2	+	4706	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	816	-1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.7356338200143	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTACATTTAGTGT	NA	False	NA	12	True	AATAAA	-14	NA	153188580	153244010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188782_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.36	chr2	+	6673	13	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	863	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	79.0964161991904	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTCTCCTTGTCATCT	NA	False	NA	5	True	AATAAA	-14	NA	153188627	153245925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188786_153194115_153194196_153198989_153199099_153223007_153223109_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.37	chr2	+	4556	12	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	881	-1909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.7356338200143	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTAGTGTGTGTATTT	NA	False	NA	20	True	AATAAA	-22	NA	153188645	153244018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188689_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.38	chr2	+	6521	13	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	881	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72.2177936676428	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTCCTTGTCATC	NA	False	NA	4	True	AATAAA	-13	NA	153188645	153245924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188689_153189900_153189960_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.39	chr2	+	6714	13	NNC	ENSMUSG00000042548.15	novel	717	4	NA	NA	-570	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.0067271477148	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTCTCCTTGTCAT	NA	False	NA	3	True	AATAAA	-12	NA	153189024	153245923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153189246_153194108_153194192_153198986_153199099_153200436_153200512_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.4	chr2	+	5168	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-32	-1848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.8797082897678	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATGAACTCTCTCTCT	NA	False	NA	81	True	NA	NA	NA	153187716	153244079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.40	chr2	+	175	1	Intergenic	novelGene_16849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAAGATAGT	2015	False	NA	NA	False	NA	NA	NA	153193816	153193991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153193800_153194000
ES.20384.41	chr2	+	177	2	Intergenic	novelGene_16850	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAAGCTGG	9348	False	NA	NA	False	NA	NA	NA	153201149	153207185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153201296_153207154
ES.20384.42	chr2	+	4065	1	Intergenic	novelGene_16852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	153203306	153207371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153203300_153207400
ES.20384.43	chr2	+	6814	9	ISM	ENSMUSG00000042548.15	ENSMUST00000109790.2	6968	13	45096	1	-1919	-1	3prime_fragment	FALSE	canonical	3	130	junction_3	21.3947277383939	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	304	False	NA	6	True	AATAAA	-15	NA	153232860	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.44	chr2	+	4105	7	ISM	ENSMUSG00000042548.15	ENSMUST00000109790.2	6968	13	46992	1907	-23	-1907	3prime_fragment	FALSE	canonical	3	130	junction_1	24.592794789441	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGTGTGTATTTTA	2200	False	NA	22	True	AATAAA	-24	NA	153234756	153244020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.45	chr2	+	5030	6	ISM	ENSMUSG00000042548.15	ENSMUST00000109790.2	6968	13	47500	888	485	-888	3prime_fragment	FALSE	canonical	3	143	junction_5	20.4352636391117	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACTGAGTGCTGTGC	2708	False	NA	NA	False	ATTAAA	-33	NA	153235264	153245039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20384.46	chr2	+	4769	1	NIC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	6378	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTCCTTGTCATCTG	221	False	NA	6	True	AATAAA	-15	NA	153241157	153245926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153241200_153245900
ES.20384.47	chr2	+	4591	1	Genic_Genomic	ENSMUSG00000042548.15	novel	NA	NA	NA	NA	7685	1128	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTCAGGTTAGGGTG	852	False	NA	NA	False	NA	NA	NA	153242464	153247055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_153242500_153247100
ES.20384.5	chr2	+	6115	12	NNC	ENSMUSG00000042548.15	novel	6981	12	NA	NA	-15	-884	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.8797082897678	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGAGTGCTGTGCTGCC	NA	False	NA	NA	False	ATTAAA	-37	NA	153187733	153245043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153188311_153194108_153194192_153198986_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ES.20385.1	chr2	-	4102	2	FSM	ENSMUSG00000073236.5	ENSMUST00000125345.2	402	2	-2338	-1362	251	4	multi-exon	FALSE	canonical	1	4	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACTCATTTCTAATTT	9526	False	NA	NA	False	AATAAA	-25	NA	153187479	153183072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153184785_153185089
ES.20385.2	chr2	-	2075	4	NNC	ENSMUSG00000073236.5	novel	1898	2	NA	NA	-301	-327	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	9.53356643071673	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGCTAAAAAATTGCAT	8711	False	NA	NA	False	NA	NA	NA	153188294	153183403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153184785_153187037_153187099_153187540_153187676_153187796
ES.20385.3	chr2	-	4935	1	Genic_Genomic	ENSMUSG00000073236.5	novel	NA	NA	NA	NA	-345	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGCTAAAAAATTGCAT	8667	False	NA	NA	False	NA	NA	NA	153188338	153183403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_153183400_153188300
ES.20385.4	chr2	-	2229	4	NNC	ENSMUSG00000073236.5	novel	1898	2	NA	NA	-491	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.6562449087639	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGCTAAAAAATTGCAT	8521	False	NA	NA	False	NA	NA	NA	153188484	153183403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153184785_153187037_153187099_153187540_153187640_153187796
ES.20385.5	chr2	-	1587	2	FSM	ENSMUSG00000073236.5	ENSMUST00000139636.2	427	2	-17	-1143	-17	-335	multi-exon	FALSE	canonical	2	3	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACTTGCTAAAA	8995	False	NA	NA	False	NA	NA	NA	153188010	153183411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153184785_153187796
ES.20385.6	chr2	-	1665	3	NNC	ENSMUSG00000073236.5	novel	427	2	NA	NA	-34	-335	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACTTGCTAAAA	8978	False	NA	NA	False	NA	NA	NA	153188027	153183411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153184785_153187037_153187099_153187796
ES.20386.1	chr2	-	5097	9	Antisense	novelGene_ENSMUSG00000042548.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATATTAACTGCTCTT	424	False	NA	NA	False	NA	NA	NA	153241292	153195670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_153199097_153233446_153233741_153234758_153234851_153235264_153235417_153235538_153235712_153235804_153235898_153238650_153238758_153239295_153239923_153241159
ES.20386.2	chr2	-	3374	4	Antisense	novelGene_ENSMUSG00000042548.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAATCTAGAACGTCA	6102	False	NA	NA	False	NA	NA	NA	153235614	153196750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_153199097_153233446_153233741_153234758_153235417_153235538
ES.20386.3	chr2	-	177	1	Intergenic	novelGene_16851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTTTAG	NA	False	NA	NA	False	NA	NA	NA	153202407	153202230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153202200_153202400
ES.20387.1	chr2	+	2491	1	Intergenic	novelGene_16853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCTGACCACTACTTAC	NA	False	NA	NA	False	NA	NA	NA	153256052	153258543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153256100_153258500
ES.20388.1	chr2	+	259	1	Intergenic	novelGene_16856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATGAAGAACTGGCCT	NA	False	NA	NA	False	NA	NA	NA	153322755	153323014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153322800_153323000
ES.20389.1	chr2	+	172	1	Intergenic	novelGene_16857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	2295	False	NA	NA	False	NA	NA	NA	153349691	153349863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153349700_153349900
ES.2039.1	chr1	+	242	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGATTTATTTATTAT	4052	False	NA	NA	False	NA	NA	NA	180378991	180379233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180379000_180379200
ES.20390.1	chr2	+	6685	1	Intergenic	novelGene_16858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	5794	False	NA	NA	False	NA	NA	NA	153353190	153359875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153353200_153359900
ES.20391.1	chr2	+	3115	1	Antisense	novelGene_ENSMUSG00000061411.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTCTGCCTTCCTTTC	1077	False	NA	NA	False	AATAAA	-19	NA	153369889	153373004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_153369900_153373000
ES.20392.1	chr2	+	646	3	Intergenic	novelGene_16859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGAGCAGTTTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	153391606	153394436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153391832_153392806_153393011_153394219
ES.20393.1	chr2	-	5729	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	-114	-5	-114	1	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153286513	153249380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
ES.20393.11	chr2	-	5969	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8888	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	27.7676070268938	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	AATAAA	-18	NA	153363003	153249382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.12	chr2	-	6220	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8890	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6602204524097	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTGAGCTTCGACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	153363001	153249383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362630
ES.20393.13	chr2	-	5435	12	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8890	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.6496837162529	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTGAGCTTCGACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	153363001	153249383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153252989_153253537_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.14	chr2	-	6238	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8890	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.6339680746716	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTGAGCTTCGACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	153363001	153249383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362630
ES.20393.15	chr2	-	6084	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	194	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6602204524097	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACTGAGCTTCGACTAT	NA	False	NA	NA	False	AATAAA	-17	NA	153371697	153249383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371462
ES.20393.16	chr2	-	6832	10	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-375	0	intron_retention	FALSE	canonical	3	30	junction_4	27.9006172771221	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153372266	153249385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.17	chr2	-	6039	10	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8895	0	intron_retention	FALSE	canonical	3	27	junction_9	28.9435380536266	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153362996	153249385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.18	chr2	-	6570	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-327	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.7387069200841	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153372218	153249385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259793_153259905_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371462
ES.20393.19	chr2	-	5976	10	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.4051447415025	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153371703	153249385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153325606_153325763_153371462
ES.20393.2	chr2	-	6979	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-579	-1	-579	1	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153372470	153249380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.20	chr2	-	6246	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	30.1834391678616	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153363004	153249385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362623
ES.20393.21	chr2	-	6576	10	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-298	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	32.355662392986	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTTACACTGAGCTT	NA	False	NA	NA	False	AATAAA	-10	NA	153372189	153249390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153325606_153325763_153371361
ES.20393.22	chr2	-	6053	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-5	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.6339680746716	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGGATGTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	153371896	153249631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371462
ES.20393.23	chr2	-	2197	1	ISM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	119329	984	33837	-980	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGATGCCCCATCCCTG	NA	False	NA	NA	False	NA	NA	NA	153252562	153250365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_153250400_153252600
ES.20393.25	chr2	-	5554	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-307	1152	-307	-1148	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCCGTGGTCTGATTTT	NA	False	NA	1	True	AGTAAA	-27	NA	153372198	153250533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.26	chr2	-	4829	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8875	-1150	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	27.7676070268938	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGTCCGTGGTCTGATT	NA	False	NA	-1	True	AGTAAA	-25	NA	153363016	153250535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.27	chr2	-	4781	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-326	-1151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6602204524097	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCCGTCCGTGGTCTGAT	NA	False	NA	-2	True	AGTAAA	-24	NA	153326072	153250536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153325987
ES.20393.28	chr2	-	6150	12	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8855	-1152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.3175412473455	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCGTCCGTGGTCTGA	NA	False	NA	-3	True	AGTAAA	-23	NA	153363036	153250537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153321443_153322486_153325606_153325763_153362623
ES.20393.3	chr2	-	6885	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-503	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153372394	153249380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.30	chr2	-	4579	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	-143	-1156	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCAATCCGTCCGTGGT	NA	False	NA	-7	True	AGTAAA	-19	NA	153286542	153250541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
ES.20393.31	chr2	-	5062	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8888	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.6602204524097	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCAATCCGTCCGTG	NA	False	NA	-9	True	AGTAAA	-17	NA	153363003	153250543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362630
ES.20393.33	chr2	-	5244	10	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	71	-1160	intron_retention	FALSE	canonical	3	34	junction_9	24.9701055832671	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTTTCAATCCGTCCG	NA	False	NA	-11	True	AGTAAA	-15	NA	153371820	153250545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.34	chr2	-	4935	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	180	-1160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.6602204524097	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTTTCAATCCGTCCG	NA	False	NA	-11	True	AGTAAA	-15	NA	153371711	153250545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371463
ES.20393.35	chr2	-	5503	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-286	-1160	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTTTCAATCCGTCCG	NA	False	NA	-11	True	AGTAAA	-15	NA	153372177	153250545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.4	chr2	-	5710	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	-113	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153286512	153249380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
ES.20393.42	chr2	-	2577	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8888	-3407	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	25.0856532703456	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTCTACCTCACACTCC	NA	False	NA	NA	False	NA	NA	NA	153363003	153252792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.43	chr2	-	1887	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	10	-3695	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	31.3205937337838	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGCCAGTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	153286389	153253080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153286276
ES.20393.44	chr2	-	2955	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	-256	3700	-256	-3696	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGCCAGTCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	153372147	153253081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.45	chr2	-	2662	12	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	212	-3698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.0768704806861	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATTGCCAGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	153371679	153253083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153273689_153273867_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.46	chr2	-	3048	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-369	-3698	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATTGCCAGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	153372260	153253083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ES.20393.47	chr2	-	1891	9	NNC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	-110	-3753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.3006112207494	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCTCTCCCCTTAGT	NA	False	NA	NA	False	NA	NA	NA	153286509	153253138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276_153286351_153286426
ES.20393.48	chr2	-	2194	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8888	-3790	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	25.0856532703456	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAATTGCATATTTATT	NA	False	NA	NA	False	NA	NA	NA	153363003	153253175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.49	chr2	-	4888	1	Intergenic	novelGene_16854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAGCCTGAGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	153274140	153269252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153269300_153274100
ES.20393.5	chr2	-	6047	10	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8910	1	intron_retention	FALSE	canonical	3	27	junction_9	26.2128043351167	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTTCGACTATGTC	NA	False	NA	NA	False	AATAAA	-20	NA	153362981	153249380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.50	chr2	-	744	5	NNC	ENSMUSG00000061411.13	novel	587	4	NA	NA	8890	24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.6043977004683	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153363001	153295794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153296044_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.51	chr2	-	3661	1	Genic_Genomic	ENSMUSG00000061411.13	novel	NA	NA	NA	NA	16708	388	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATTTGTAGGGAAAGAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	153304938	153301277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_153301300_153304900
ES.20393.52	chr2	-	3128	1	Intergenic	novelGene_16855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACAGTCACTAG	NA	False	NA	NA	False	NA	NA	NA	153311533	153308405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153308400_153311500
ES.20393.6	chr2	-	5989	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8887	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	25.0856532703456	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGAGCTTCGACTATGT	NA	False	NA	NA	False	AATAAA	-19	NA	153363004	153249381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.7	chr2	-	8371	10	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8891	0	intron_retention	FALSE	canonical	3	27	junction_9	25.7509438877706	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGAGCTTCGACTATGT	NA	False	NA	NA	False	AATAAA	-19	NA	153363000	153249381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
ES.20393.9	chr2	-	5515	8	NIC	ENSMUSG00000061411.13	novel	5610	8	NA	NA	42	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	34.5613916953349	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGCTTCGACTATG	NA	False	NA	NA	False	AATAAA	-18	NA	153287459	153249382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153287434
ES.20394.1	chr2	+	177	1	Intergenic	novelGene_16860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	153404910	153405087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153404900_153405100
ES.20395.1	chr2	+	1386	1	Intergenic	novelGene_16861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGATCACGGTCCTTGT	5597	False	NA	NA	False	NA	NA	NA	153419405	153420791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153419400_153420800
ES.20396.1	chr2	-	225	1	Intergenic	novelGene_16862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCCAGAACCCAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	153433475	153433250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153433200_153433500
ES.20397.1	chr2	+	182	1	Antisense	novelGene_ENSMUSG00000056941.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	153459164	153459346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_153459200_153459300
ES.20398.1	chr2	+	124	1	Intergenic	novelGene_16863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153473905	153474029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153473900_153474000
ES.20399.1	chr2	-	3950	9	NNC	ENSMUSG00000056941.18	novel	3210	9	NA	NA	43	4	intron_retention	TRUE	non_canonical	0	0	junction_1	62.9303930942752	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGGTTTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	153474608	153458848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.10	chr2	-	1330	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	0	1880	0	21	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCTTTCTCCATGGT	NA	False	NA	2	True	ATTAAA	-38	NA	153474701	153460732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.11	chr2	-	1142	8	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	43	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	66.4548335184069	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	False	NA	-19	True	ATTAAA	-17	NA	153474608	153460753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153461408_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.12	chr2	-	1362	10	FSM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	10	junction_9	72.7254264636584	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	False	NA	-19	True	ATTAAA	-17	NA	153474679	153460753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
ES.20399.13	chr2	-	1364	10	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.2566212242268	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	False	NA	-19	True	ATTAAA	-17	NA	153474602	153460753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153473119_153473274_153474513
ES.20399.15	chr2	-	1147	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	30	2033	-11	-132	multi-exon	FALSE	canonical	3	166	junction_3	11.9373363863133	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTGTGTTTGTCTCTT	NA	False	NA	-6	True	NA	NA	NA	153474671	153460885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.16	chr2	-	4205	3	ISM	ENSMUSG00000056941.18	ENSMUST00000147822.8	3467	7	-40	5761	10	-5761	5prime_fragment	FALSE	canonical	3	184	junction_2	10.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGAGGAGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	153474691	153466514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_153470488_153471112_153471167_153474513
ES.20399.2	chr2	-	3132	11	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0273734798329	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATGGGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	153474651	153458851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
ES.20399.3	chr2	-	2746	11	NNC	ENSMUSG00000056941.18	novel	3210	9	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1622245546258	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTATGGGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	153474681	153458852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153460714_153461053_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.4	chr2	-	3066	10	NNC	ENSMUSG00000056941.18	novel	3210	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.527771296728	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTATGGGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	153474661	153458852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.5	chr2	-	3194	11	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.7879218243821	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTTATGGGTTTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	153474640	153458854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474259_153474513
ES.20399.6	chr2	-	2244	11	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	2	938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.7879218243821	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCCGTTAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	153474649	153459815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460244_153460345_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474259_153474513
ES.20399.7	chr2	-	1789	11	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	1	925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1622245546258	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGATTGCTTAAATATT	NA	False	NA	NA	False	NA	NA	NA	153474700	153459828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153460714_153461053_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.8	chr2	-	2077	10	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	2	924	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.527771296728	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGATTGCTTAAATAT	NA	False	NA	NA	False	NA	NA	NA	153474649	153459829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.20399.9	chr2	-	1692	10	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	-2	535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.527771296728	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGAAAGTGTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	153474653	153460218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_153460234_153460337_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ES.204.1	chr1	-	141	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	27119975	27119834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_27119800_27120000
ES.2040.1	chr1	+	3772	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-147	248	-142	-246	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTTATCTTGTAT	3000	False	NA	22	True	AATAAA	-23	NA	180396346	180428571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.10	chr1	+	5143	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-19	-253	intron_retention	FALSE	canonical	3	1402	junction_6	227.760416350682	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3123	False	NA	15	True	AATAAA	-16	NA	180396469	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.100	chr1	+	3693	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	47	0	intron_retention	FALSE	canonical	1	19	junction_11	470.582935644428	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3194	False	NA	10	True	ATTAAA	-18	NA	180396540	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.101	chr1	+	3827	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	50	0	intron_retention	FALSE	non_canonical	0	0	junction_12	464.596750414666	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3197	False	NA	8	True	ATTAAA	-16	NA	180396543	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416956_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.102	chr1	+	3810	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	55	0	intron_retention	FALSE	canonical	0	0	junction_4	464.579984484342	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3202	False	NA	8	True	ATTAAA	-16	NA	180396548	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408103_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.103	chr1	+	3551	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	60	-253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	464.090777757973	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3207	False	NA	15	True	AATAAA	-16	NA	180396553	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414832_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.104	chr1	+	5625	21	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	83	-253	intron_retention	FALSE	canonical	3	1402	junction_6	228.591398569587	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3230	False	NA	15	True	AATAAA	-16	NA	180396576	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.105	chr1	+	3453	24	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	98	-254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	454.418850283947	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3245	False	NA	14	True	AATAAA	-15	NA	180396591	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406787_180406852_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.106	chr1	+	3801	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-144	1503	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	447.325994610804	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCGACTAGAAAAAACATTGA	3300	False	NA	NA	False	NA	NA	NA	180396646	180430322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427822_180429482
ES.2040.107	chr1	+	3578	23	Fusion	ENSMUSG00000026496.12_ENSMUSG00000098926.3	novel	476	5	NA	NA	-52	-253	multi-exon	FALSE	canonical	0	0	junction_1	464.452688211379	2299	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3392	False	NA	15	True	AATAAA	-16	NA	180396738	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_180396924_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.108	chr1	+	3838	23	Fusion	ENSMUSG00000026496.12_ENSMUSG00000098926.3	novel	476	5	NA	NA	-44	0	intron_retention	FALSE	canonical	2	3	junction_1	463.907532108617	2302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3400	False	NA	8	True	ATTAAA	-16	NA	180396746	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_180396939_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.109	chr1	+	3395	22	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	4721	255	4424	-253	3prime_fragment	FALSE	canonical	3	1402	junction_5	232.232144001391	2298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	7868	False	NA	15	True	AATAAA	-16	NA	180401214	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.110	chr1	+	3637	22	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	4721	13	4424	-11	3prime_fragment	FALSE	canonical	3	1402	junction_5	232.232144001391	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATATCTACTCTCGT	7868	False	NA	-3	True	ATTAAA	-5	NA	180401214	180428806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.112	chr1	+	3230	21	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	8651	255	8354	-253	3prime_fragment	FALSE	canonical	3	1402	junction_4	237.737938705626	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3092	False	NA	15	True	AATAAA	-16	NA	180405144	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.113	chr1	+	3484	21	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	8651	1	8354	1	3prime_fragment	FALSE	canonical	3	1402	junction_4	237.737938705626	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3092	False	NA	9	True	ATTAAA	-17	NA	180405144	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.114	chr1	+	3239	20	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	10043	0	intron_retention	FALSE	canonical	0	0	junction_4	498.962191651893	2300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	4781	False	NA	8	True	ATTAAA	-16	NA	180406833	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413417_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.115	chr1	+	3151	19	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	11603	1	-8935	1	3prime_fragment	FALSE	canonical	3	1402	junction_2	244.976372002498	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	6044	False	NA	9	True	ATTAAA	-17	NA	180408096	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.116	chr1	+	2823	18	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-8923	-253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	510.912359848895	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	6056	False	NA	15	True	AATAAA	-16	NA	180408108	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427660_180427776_180428014
ES.2040.117	chr1	+	2653	17	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	14800	279	-5738	-277	3prime_fragment	FALSE	canonical	3	1757	junction_2	207.233865475699	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTTAATTTCA	9241	False	NA	-9	True	NA	NA	NA	180411293	180428540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.118	chr1	+	4200	13	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	17164	254	-3374	-252	intron_retention	FALSE	canonical	3	1767	junction_1	154.949162810115	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	NA	False	NA	16	True	AATAAA	-17	NA	180413657	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157
ES.2040.119	chr1	+	4714	13	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2947	1	intron_retention	FALSE	canonical	1	19	junction_3	599.403661984142	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	NA	False	NA	9	True	ATTAAA	-17	NA	180414084	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180414967_180415485_180415726_180415923_180415993_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.120	chr1	+	4070	14	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2170	1	intron_retention	FALSE	canonical	3	1767	junction_1	204.021927119519	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	NA	False	NA	9	True	ATTAAA	-17	NA	180414861	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.121	chr1	+	3783	11	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-1323	1	intron_retention	FALSE	canonical	3	1794	junction_4	195.447588882544	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	NA	False	NA	9	True	ATTAAA	-17	NA	180415708	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180427776_180428014
ES.2040.122	chr1	+	2169	13	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-1063	-2	intron_retention	FALSE	canonical	0	0	junction_3	606.379144320339	2300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTCTCGTGTTGTGTGC	NA	False	NA	6	True	ATTAAA	-14	NA	180415968	180428815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180415993_180416214_180416348_180416962_180417159_180418789_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.123	chr1	+	2155	12	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	19720	2	-818	0	3prime_fragment	FALSE	canonical	3	1794	junction_2	205.355326001921	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	NA	False	NA	8	True	ATTAAA	-16	NA	180416213	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.124	chr1	+	1771	11	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	20466	255	-72	-253	3prime_fragment	FALSE	canonical	3	1794	junction_1	205.96283645357	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	NA	False	NA	15	True	AATAAA	-16	NA	180416959	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.125	chr1	+	1827	10	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	22287	2	-67	0	3prime_fragment	FALSE	canonical	3	1798	junction_5	189.621259942608	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	NA	False	NA	8	True	ATTAAA	-16	NA	180418780	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.126	chr1	+	4203	6	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	400	0	intron_retention	FALSE	canonical	3	1798	junction_4	206.539681417397	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	NA	False	NA	10	True	ATTAAA	-18	NA	180419247	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180427220_180427660
ES.2040.127	chr1	+	1360	6	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	28359	4	-937	-2	3prime_fragment	FALSE	canonical	3	1798	junction_1	218.611619087367	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTCTCGTGTTGTGTGC	1399	False	NA	6	True	ATTAAA	-14	NA	180424852	180428815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.128	chr1	+	157	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAATTTAAAAAG	7674	False	NA	NA	False	NA	NA	NA	180431127	180431284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180431100_180431300
ES.2040.15	chr1	+	2036	12	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	535.872687482841	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3135	False	NA	9	True	ATTAAA	-17	NA	180396481	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415958_180428476
ES.2040.16	chr1	+	3621	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-5	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	585.745459906991	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3137	False	NA	16	True	AATAAA	-17	NA	180396483	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415922_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428023
ES.2040.17	chr1	+	3871	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_8	464.090777757973	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3137	False	NA	9	True	ATTAAA	-17	NA	180396483	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413549_180414829_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.19	chr1	+	3635	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-3	-253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	447.698347012087	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3139	False	NA	15	True	AATAAA	-16	NA	180396485	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428005
ES.2040.2	chr1	+	4017	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-142	-2	-137	2	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTTGTGTGCCTCATC	3005	False	NA	12	True	ATTAAA	-20	NA	180396351	180428821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.28	chr1	+	3618	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-3	-254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	453.78644811835	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3139	False	NA	14	True	AATAAA	-15	NA	180396485	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410433_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.29	chr1	+	4230	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	-8	-349	-3	349	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGCAACCCCAGGTTGG	3139	False	NA	NA	False	NA	NA	NA	180396485	180429168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.31	chr1	+	3596	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	2	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	447.698347012087	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3144	False	NA	15	True	AATAAA	-16	NA	180396490	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428039
ES.2040.33	chr1	+	3616	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	2	999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	447.698347012087	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTGGTTGTGACACATT	3144	False	NA	NA	False	AAGAAA	-13	NA	180396490	180429818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180429273
ES.2040.34	chr1	+	3888	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_2	464.549243891323	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3145	False	NA	9	True	ATTAAA	-17	NA	180396491	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401397_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.35	chr1	+	6345	21	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2	-253	intron_retention	FALSE	canonical	3	1402	junction_5	230.429658464357	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3145	False	NA	15	True	AATAAA	-16	NA	180396491	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.36	chr1	+	5426	21	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2	1	intron_retention	FALSE	canonical	3	1402	junction_6	220.963684799109	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3145	False	NA	9	True	ATTAAA	-17	NA	180396491	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427776_180428014
ES.2040.39	chr1	+	3275	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	447.698347012087	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3145	False	NA	8	True	ATTAAA	-16	NA	180396491	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427797_180428633
ES.2040.43	chr1	+	3874	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_22	447.698347012087	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3150	False	NA	8	True	ATTAAA	-16	NA	180396496	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428008
ES.2040.45	chr1	+	3609	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	3	-253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	464.436270748503	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3150	False	NA	15	True	AATAAA	-16	NA	180396496	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424948_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.46	chr1	+	3446	24	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	3	7946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	454.418850283946	2311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGTCTGGGGAGGGGT	3150	False	NA	NA	False	AATATA	-37	NA	180396496	180436765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014_180428040_180436409
ES.2040.47	chr1	+	3500	24	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	3	-254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	454.418850283947	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3150	False	NA	14	True	AATAAA	-15	NA	180396496	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406771_180406884_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.48	chr1	+	3833	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	447.698347012087	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3152	False	NA	10	True	ATTAAA	-18	NA	180396498	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427787_180428060
ES.2040.50	chr1	+	5609	21	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	9	1	intron_retention	FALSE	canonical	0	0	junction_9	623.323391186309	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3156	False	NA	9	True	ATTAAA	-17	NA	180396502	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180415071_180415211_180415726_180415923_180415993_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.51	chr1	+	4683	21	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	13	-253	intron_retention	FALSE	canonical	3	1402	junction_6	220.592673269082	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3160	False	NA	15	True	AATAAA	-16	NA	180396506	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180422349_180424854_180424954_180425775_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.52	chr1	+	3368	22	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	13	-254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	617.241838770141	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3160	False	NA	14	True	AATAAA	-15	NA	180396506	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415920_180415993_180416214_180416348_180416962_180417159_180418781_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.53	chr1	+	5312	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	14	0	intron_retention	FALSE	canonical	3	1402	junction_5	229.088997351429	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3161	False	NA	8	True	ATTAAA	-16	NA	180396507	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.58	chr1	+	3840	22	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	17	255	17	-253	intron_retention	FALSE	canonical	3	1402	junction_6	205.422654836757	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3164	False	NA	15	True	AATAAA	-16	NA	180396510	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660
ES.2040.59	chr1	+	3594	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	17	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	464.549243891323	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3164	False	NA	15	True	AATAAA	-16	NA	180396510	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401376_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.60	chr1	+	3753	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	17	0	intron_retention	TRUE	non_canonical	0	0	junction_9	464.190936153014	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3164	False	NA	8	True	ATTAAA	-16	NA	180396510	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415586_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.61	chr1	+	3843	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	18	1	intron_retention	FALSE	canonical	0	0	junction_17	462.679692588603	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3165	False	NA	9	True	ATTAAA	-17	NA	180396511	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424865_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.62	chr1	+	3833	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	18	1	intron_retention	FALSE	canonical	1	1	junction_6	453.598078635865	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3165	False	NA	9	True	ATTAAA	-17	NA	180396511	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410419_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.65	chr1	+	3795	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	19	0	intron_retention	FALSE	canonical	1	12	junction_1	462.273274782906	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3166	False	NA	8	True	ATTAAA	-16	NA	180396512	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401273_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.66	chr1	+	4868	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	19	-254	intron_retention	FALSE	canonical	3	1402	junction_6	228.500733114827	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3166	False	NA	14	True	AATAAA	-15	NA	180396512	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.67	chr1	+	3713	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_8	474.512610672335	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3166	False	NA	10	True	ATTAAA	-18	NA	180396512	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.69	chr1	+	3475	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	20	-253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	466.383407716438	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3167	False	NA	15	True	AATAAA	-16	NA	180396513	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.7	chr1	+	3960	24	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-26	1499	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_23	453.351568446031	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCGACTAGAAAAAACA	3116	False	NA	NA	False	NA	NA	NA	180396462	180430318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014_180428040_180429482
ES.2040.70	chr1	+	5121	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	22	0	intron_retention	FALSE	canonical	3	1402	junction_6	228.500733114827	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3169	False	NA	10	True	ATTAAA	-18	NA	180396515	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.71	chr1	+	3491	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	25	-253	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	464.190936153014	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3172	False	NA	15	True	AATAAA	-16	NA	180396518	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415587_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.72	chr1	+	3846	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_5	464.152103970061	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3172	False	NA	10	True	ATTAAA	-18	NA	180396518	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408205_180410328_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.73	chr1	+	3573	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	25	-252	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	453.598078635865	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3172	False	NA	16	True	AATAAA	-17	NA	180396518	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410419_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.75	chr1	+	3404	24	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	26	1000	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_23	453.351568446031	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGTTGTGACACATTG	3173	False	NA	NA	False	AAGAAA	-14	NA	180396519	180429819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014_180428040_180429482
ES.2040.76	chr1	+	3634	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	26	-254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	463.2681982974	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGATTTTCTTTTTTA	3173	False	NA	14	True	AATAAA	-15	NA	180396519	180428563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416171_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.78	chr1	+	3818	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_7	464.321944095468	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3173	False	NA	8	True	ATTAAA	-16	NA	180396519	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413434_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.79	chr1	+	3837	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	26	1	intron_retention	FALSE	canonical	0	0	junction_22	447.698347012087	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3173	False	NA	9	True	ATTAAA	-17	NA	180396519	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427767_180428014
ES.2040.8	chr1	+	3638	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	-25	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	464.152103970061	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3117	False	NA	16	True	AATAAA	-17	NA	180396463	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408196_180410328_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.82	chr1	+	2657	15	ISM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	28	7897	28	21	5prime_fragment	FALSE	canonical	3	1402	junction_6	168.290322517551	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTTTGGTGGAGAATT	3175	False	NA	NA	False	AAGAAA	-1	NA	180396521	180420922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412
ES.2040.84	chr1	+	5648	20	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	32	0	intron_retention	FALSE	canonical	1	19	junction_11	475.816184625162	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3179	False	NA	8	True	ATTAAA	-16	NA	180396525	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427776_180428014
ES.2040.86	chr1	+	3435	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	35	-253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	474.654518112517	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGATTTTCTTTTTTAT	3182	False	NA	15	True	AATAAA	-16	NA	180396528	180428564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.87	chr1	+	4050	22	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_1	618.322267352434	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3182	False	NA	10	True	ATTAAA	-18	NA	180396528	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180415071_180415211_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.88	chr1	+	3577	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	36	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	464.452688211379	2299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3183	False	NA	16	True	AATAAA	-17	NA	180396529	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396713_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.91	chr1	+	3829	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	39	0	intron_retention	FALSE	non_canonical	0	0	junction_6	453.78644811835	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTCGTGTTGTGTGCCT	3186	False	NA	8	True	ATTAAA	-16	NA	180396532	180428817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410433_180411290_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.95	chr1	+	3823	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	45	1	intron_retention	FALSE	canonical	0	0	junction_5	464.152103970061	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCGTGTTGTGTGCCTC	3192	False	NA	9	True	ATTAAA	-17	NA	180396538	180428818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408178_180410303_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.96	chr1	+	6531	21	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	45	-251	intron_retention	FALSE	canonical	3	1402	junction_5	230.391378961974	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTTCTTTTTTATCT	3192	False	NA	17	True	AATAAA	-18	NA	180396538	180428566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.97	chr1	+	3441	22	NIC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	45	-252	combination_of_known_splicesites	FALSE	canonical	1	19	junction_11	470.582935644428	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGATTTTCTTTTTTATC	3192	False	NA	16	True	AATAAA	-17	NA	180396538	180428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.98	chr1	+	3589	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	45	0	intron_retention	FALSE	non_canonical	0	0	junction_1	464.452688211379	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3192	False	NA	10	True	ATTAAA	-18	NA	180396538	180428819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396595_180401331_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.2040.99	chr1	+	3805	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	45	-2	intron_retention	FALSE	canonical	0	0	junction_4	464.579984484342	2302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACTCTCGTGTTGTGTGC	3192	False	NA	6	True	ATTAAA	-14	NA	180396538	180428815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408116_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ES.20400.1	chr2	+	174	1	Intergenic	novelGene_16864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	153486806	153486980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_153486800_153487000
ES.20401.1	chr2	+	4193	22	NIC	ENSMUSG00000027478.16	novel	4130	22	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	25.7619487720775	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491313	153529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.10	chr2	+	3894	20	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	27.8320049334387	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491369	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.13	chr2	+	4461	24	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	39.7717495276672	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491370	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153496249_153496359_153498061_153498318_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514220_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.14	chr2	+	4284	23	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.3042572912084	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491372	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153498163_153498318_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.15	chr2	+	4138	22	NIC	ENSMUSG00000027478.16	novel	4320	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_20	26.8295197357631	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491372	153529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153526278_153526398_153528177
ES.20401.16	chr2	+	4805	27	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.1427558323361	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491373	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153496029_153496150_153496249_153496359_153498061_153498318_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.18	chr2	+	4323	24	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.1395467894775	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153491374	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153503118_153503186_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.2	chr2	+	4074	21	NIC	ENSMUSG00000027478.16	novel	4015	21	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	20.6421898063166	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491317	153529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.20	chr2	+	4675	25	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.256993002177	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153491415	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492482_153492742_153498061_153498318_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.21	chr2	+	4338	23	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.1926819077851	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153491419	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153498061_153498318_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.22	chr2	+	4331	22	NNC	ENSMUSG00000027478.16	novel	3630	23	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.1078115826328	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491419	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492379_153492742_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.23	chr2	+	4190	24	NNC	ENSMUSG00000027478.16	novel	4320	24	NA	NA	49	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	31.0808446408987	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491422	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492742_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.25	chr2	+	4083	22	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	28.9519893457225	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491433	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.26	chr2	+	4010	21	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	60	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	31.6203652730325	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491433	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.27	chr2	+	4177	23	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	-81	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	31.5440463400644	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491455	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.28	chr2	+	3913	21	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	-72	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	31.4906335280826	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491464	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.29	chr2	+	4152	23	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	-66	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_21	30.0819816474033	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491470	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153526278_153526398_153528177
ES.20401.3	chr2	+	4242	23	FSM	ENSMUSG00000027478.16	ENSMUST00000109771.2	3630	23	-199	-413	-32	-1	multi-exon	FALSE	canonical	3	48	junction_1	22.8903242036621	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGTGTTTTTTAT	NA	False	NA	25	True	ATTAAA	-17	NA	153491337	153529649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.31	chr2	+	4358	24	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.1394645192499	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153491579	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492379_153492742_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.32	chr2	+	6086	20	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	83	1	intron_retention	FALSE	canonical	0	0	junction_10	33.2843869631463	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153491619	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153511776_153512222_153512368_153512768_153512786_153514135_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.33	chr2	+	4182	25	NNC	ENSMUSG00000027478.16	novel	4320	24	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.519039987247	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491622	153529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153496249_153496359_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.34	chr2	+	3207	1	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	87	-15049	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGTGTCTGCAGGGTAA	NA	False	NA	NA	False	NA	NA	NA	153491623	153494830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491600_153494800
ES.20401.35	chr2	+	3949	22	NNC	ENSMUSG00000027478.16	novel	756	2	NA	NA	756	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.835737657943	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAACGTGCTGTGTGTTT	NA	False	NA	20	True	ATTAAA	-12	NA	153492292	153529644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153492483_153492704_153492742_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.36	chr2	+	3875	21	NNC	ENSMUSG00000027478.16	novel	756	2	NA	NA	2275	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.2385755868401	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153493811	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153493960_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.37	chr2	+	4036	23	NNC	ENSMUSG00000027478.16	novel	756	2	NA	NA	2286	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.9586491877892	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153493822	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153493947_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.38	chr2	+	6075	1	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	-8019	-4102	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTATTGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	153499702	153505777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153499700_153505800
ES.20401.39	chr2	+	4263	23	NNC	ENSMUSG00000027478.16	novel	756	2	NA	NA	-4882	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.1941322070585	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153502839	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153503186_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.4	chr2	+	4352	24	FSM	ENSMUSG00000027478.16	ENSMUST00000056495.14	4318	24	-30	-4	-26	0	multi-exon	FALSE	canonical	3	28	junction_1	26.7017412684545	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491343	153529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.40	chr2	+	3917	22	ISM	ENSMUSG00000027478.16	ENSMUST00000109774.9	4320	24	11969	3	-4380	1	3prime_fragment	FALSE	canonical	3	33	junction_14	24.3322616481925	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153503341	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.41	chr2	+	3428	17	NIC	ENSMUSG00000027478.16	novel	3630	23	NA	NA	-550	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	34.7207048279553	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153507171	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153526278_153526398_153528177
ES.20401.42	chr2	+	4759	12	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	-27	0	intron_retention	FALSE	canonical	3	65	junction_6	19.3395069462905	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153511262	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153511776_153512222_153512368_153512768_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.43	chr2	+	4170	9	NIC	ENSMUSG00000027478.16	novel	3630	23	NA	NA	2957	-1	intron_retention	FALSE	canonical	3	56	junction_7	26.5835945650696	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACGTGCTGTGTGTTTT	NA	False	NA	21	True	ATTAAA	-13	NA	153514246	153529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153514461_153515906_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153526398_153528177
ES.20401.45	chr2	+	2099	7	NIC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	6356	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	44.2342250600897	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153517645	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153528177
ES.20401.46	chr2	+	3108	2	NIC	ENSMUSG00000027478.16	novel	4148	22	NA	NA	13470	1	intron_retention	FALSE	canonical	3	57	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGTGCTGTGTGTTTTTT	NA	False	NA	23	True	ATTAAA	-15	NA	153524759	153529647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153526398_153528177
ES.20401.5	chr2	+	4389	25	NNC	ENSMUSG00000027478.16	novel	4318	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.6166088249378	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491369	153529646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153491661_153492704_153492820_153503118_153503186_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20401.7	chr2	+	3960	20	NIC	ENSMUSG00000027478.16	novel	4148	22	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	28.3100170206927	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491369	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ES.20401.9	chr2	+	4083	22	NIC	ENSMUSG00000027478.16	novel	4208	23	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	28.8066507815765	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTGTGTGTTTTTTA	NA	False	NA	24	True	ATTAAA	-16	NA	153491369	153529648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ES.20402.1	chr2	-	186	1	Intergenic	novelGene_16865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAAGACCCACAGTCGC	NA	False	NA	NA	False	NA	NA	NA	153572773	153572587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153572600_153572800
ES.20403.1	chr2	+	2694	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	-106	4748	-106	-4748	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583087	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.11	chr2	+	5976	6	NIC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	15	-4748	intron_retention	FALSE	canonical	3	1002	junction_3	88.8400810445376	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583208	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153603578_153606866_153607020_153608793
ES.20403.13	chr2	+	1376	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	15	-5974	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	433.015556559141	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATATGCTTCCATATT	NA	False	NA	15	True	AATAAA	-19	NA	153583208	153609256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588146_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.14	chr2	+	4347	6	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	15	4748	15	-4748	intron_retention	FALSE	canonical	3	1002	junction_3	80.4174110500954	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583208	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866
ES.20403.15	chr2	+	7235	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	40	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	402.922081898762	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTTTGGTTTATGG	NA	False	NA	NA	False	AATAAA	-27	NA	153583233	153615237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793_153609810_153609877
ES.20403.16	chr2	+	9071	6	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	44	-5	44	5	intron_retention	FALSE	canonical	3	1002	junction_3	80.4174110500954	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTGTGTTTGGTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	153583237	153615235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866
ES.20403.17	chr2	+	1492	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	57	5787	57	-5787	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATTTTGTGTCAAT	NA	False	NA	1	True	AGTAAA	-16	NA	153583250	153609443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.18	chr2	+	4708	6	NIC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	58	-5973	intron_retention	FALSE	canonical	3	1002	junction_3	88.8400810445376	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATGCTTCCATATTT	NA	False	NA	16	True	AATAAA	-20	NA	153583251	153609257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153603578_153606866_153607020_153608793
ES.20403.19	chr2	+	7493	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.980120267833	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAATGGCTGTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	153583260	153615228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153584311_153584538_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.2	chr2	+	2449	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	-38	4925	-38	-4925	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTAACGAGCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	153583155	153610305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.20	chr2	+	7292	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	67	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	433.015556559141	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAAAGAAAAATGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	153583260	153615224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588146_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.22	chr2	+	2547	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	70	-4748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	433.015556559141	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583263	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588146_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.23	chr2	+	3060	6	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	74	5976	74	-5976	intron_retention	FALSE	canonical	3	1002	junction_3	80.4174110500954	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATATGCTTCCATA	NA	False	NA	13	True	AATAAA	-17	NA	153583267	153609254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866
ES.20403.24	chr2	+	10661	6	NIC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	74	-4	intron_retention	FALSE	canonical	3	1002	junction_3	88.8400810445376	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAAAAATGGCTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	153583267	153615226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153603578_153606866_153607020_153608793
ES.20403.25	chr2	+	2493	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	78	-4748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	426.150077893797	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583271	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597867_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.26	chr2	+	2710	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	81	-4748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.980120267833	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583274	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153584311_153584515_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.27	chr2	+	2517	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	82	-4748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	420.157675429382	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583275	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603444_153603578_153606866_153607020_153608793
ES.20403.28	chr2	+	4862	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	82	2392	82	-2392	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGATGATATTCATGTA	NA	False	NA	NA	False	CATAAA	-13	NA	153583275	153612838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.29	chr2	+	2312	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	82	-4935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	433.172566331505	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAAGCAAGTAACG	NA	False	NA	NA	False	NA	NA	NA	153583275	153610295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606873_153607020_153608793
ES.20403.3	chr2	+	1392	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	-27	5971	-27	-5971	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTTCCATATTTCA	NA	False	NA	18	True	AATAAA	-22	NA	153583166	153609259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.30	chr2	+	2546	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	82	-4749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	505.339328307914	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTCTTCTGAAATGTG	NA	False	NA	18	True	AATAAA	-19	NA	153583275	153610481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153601182_153601224_153603455_153603578_153606866_153607020_153608793
ES.20403.31	chr2	+	2519	7	NIC	ENSMUSG00000027479.15	novel	483	4	NA	NA	-25	-4749	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	426.443984858765	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTCTTCTGAAATGTG	NA	False	NA	18	True	AATAAA	-19	NA	153583496	153610481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583575_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.32	chr2	+	7252	7	NIC	ENSMUSG00000027479.15	novel	483	4	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	426.443984858765	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTTTGGTTTATGG	NA	False	NA	NA	False	AATAAA	-27	NA	153583519	153615237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583575_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.33	chr2	+	2679	8	NNC	ENSMUSG00000027479.15	novel	483	4	NA	NA	-1	-4748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.311131410224	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583520	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583575_153586191_153586375_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.34	chr2	+	1457	7	NIC	ENSMUSG00000027479.15	novel	483	4	NA	NA	0	-5786	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	426.443984858765	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTTGTGTCAATG	NA	False	NA	2	True	AGTAAA	-17	NA	153583521	153609444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_153583575_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.35	chr2	+	1483	8	NNC	ENSMUSG00000027479.15	novel	483	4	NA	NA	10	-5976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.980120267833	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATATGCTTCCATA	NA	False	NA	13	True	AATAAA	-17	NA	153583531	153609254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583575_153584311_153584538_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.36	chr2	+	2889	9	NNC	ENSMUSG00000027479.15	novel	483	4	NA	NA	11	-4752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	556.265210466195	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCCTGTCTTCTGAAAT	NA	False	NA	15	True	AATAAA	-16	NA	153583532	153610478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583575_153584311_153584538_153586191_153586375_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.37	chr2	+	3978	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	1315	-4750	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	432.285174650048	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTCTTCTGAAATGT	NA	False	NA	17	True	AATAAA	-18	NA	153584836	153610480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153586375_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.38	chr2	+	4029	2	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	19971	4748	15852	-4748	intron_retention	FALSE	canonical	3	1060	junction_1	0	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	2002	False	NA	19	True	AATAAA	-20	NA	153603164	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_153603578_153606866
ES.20403.4	chr2	+	1772	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	-19	-5786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.980120267833	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTTGTGTCAATG	NA	False	NA	2	True	AGTAAA	-17	NA	153583174	153609444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153584311_153584515_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.5	chr2	+	6246	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	9	1081	9	-1081	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGGTTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	153583202	153614149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.6	chr2	+	1273	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	11	-5977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	402.922081898762	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAATATGCTTCCAT	NA	False	NA	12	True	AATAAA	-16	NA	153583204	153609253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793_153608837_153608911
ES.20403.7	chr2	+	7332	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	11	-7	11	7	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGTTTGGTTTATGG	NA	False	NA	NA	False	AATAAA	-27	NA	153583204	153615237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.8	chr2	+	2802	8	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	12	-4748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	520.980120267833	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583205	153610482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583340_153584311_153584538_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20403.9	chr2	+	2636	7	NNC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	12	-4750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	433.38076663471	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTCTTCTGAAATGT	NA	False	NA	17	True	AATAAA	-18	NA	153583205	153610480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153583402_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ES.20404.1	chr2	+	781	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	-117	-229	-117	229	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	153667973	153668754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153668000_153668800
ES.20404.2	chr2	+	1041	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	-117	-489	-117	489	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCATGACCAAGATAACTA	NA	False	NA	NA	False	NA	NA	NA	153667973	153669014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_153668000_153669000
ES.20405.1	chr2	+	748	7	NNC	ENSMUSG00000074665.12	novel	2420	17	NA	NA	10159	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.91070819942883	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGGTGTCTCCATGAA	NA	False	NA	NA	False	NA	NA	NA	153796001	153805772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_153796057_153796182_153796354_153799049_153799118_153799638_153799682_153801569_153801634_153803435_153803513_153805502
ES.20406.1	chr2	-	191	1	Intergenic	novelGene_16866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCATTAACTCATCTAT	NA	False	NA	NA	False	NA	NA	NA	153968265	153968074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_153968100_153968300
ES.20407.1	chr2	+	2708	14	NIC	ENSMUSG00000027485.16	novel	1699	16	NA	NA	1991	0	intron_retention	FALSE	canonical	0	0	junction_2	2.64239446727964	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGTTGTCCGGGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	154044289	154062262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154044650_154046596_154046736_154047338_154047447_154048328_154048479_154049009_154049092_154051790_154051855_154053417_154053504_154054853_154055034_154055384_154055439_154055913_154056073_154057180_154057249_154058135_154059155_154060123_154060201_154062100
ES.20407.2	chr2	+	1098	12	ISM	ENSMUSG00000027485.16	ENSMUST00000028987.7	1637	16	6124	1	6124	0	3prime_fragment	FALSE	canonical	1	1	junction_8	2.18938083250769	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGTTGTCCGGGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	154048422	154062262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154048479_154049009_154049092_154051790_154051855_154053417_154053504_154054853_154055034_154055384_154055439_154055913_154056073_154057180_154057249_154058135_154058182_154059090_154059155_154060123_154060201_154062100
ES.20408.1	chr2	+	1705	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	-70	2	-70	-2	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGTCTGAGTTTGC	NA	False	NA	3	True	AATAAA	-13	NA	154065591	154082820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
ES.20408.2	chr2	+	1993	14	NIC	ENSMUSG00000038572.8	novel	1637	15	NA	NA	14	-2	intron_retention	FALSE	canonical	3	26	junction_3	7.18314924918692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGTCTGAGTTTGC	NA	False	NA	3	True	AATAAA	-13	NA	154065675	154082820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
ES.20408.3	chr2	+	5314	11	NIC	ENSMUSG00000038572.8	novel	1637	15	NA	NA	22	-2	intron_retention	FALSE	canonical	0	0	junction_4	12.4020159651566	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGTCTGAGTTTGC	NA	False	NA	3	True	AATAAA	-13	NA	154065683	154082820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677
ES.20408.4	chr2	+	423	4	NNC	ENSMUSG00000038572.8	novel	1637	15	NA	NA	12453	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5458168149231	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGTGTCTGAGTTTG	NA	False	NA	2	True	AATAAA	-12	NA	154078114	154082819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154078168_154078599_154078742_154080747_154080828_154082671
ES.20409.1	chr2	+	170	1	Intergenic	novelGene_16871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTATTAATAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154092586	154092756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154092600_154092800
ES.2041.1	chr1	-	4018	1	Antisense	novelGene_ENSMUSG00000026496.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCGGGAATGCAGTCAA	NA	False	NA	NA	False	AAAAAG	-4	NA	180407108	180403090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180403100_180407100
ES.2041.2	chr1	-	4502	5	Antisense	novelGene_ENSMUSG00000026496.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTGCGGGAATGCAG	NA	False	NA	NA	False	NA	NA	NA	180413192	180403094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180405262_180406716_180406933_180408096_180408199_180410320_180410439_180411293
ES.20410.1	chr2	-	3243	4	Intergenic	novelGene_16868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATTGTATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	154173928	154061450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154061496_154061679_154064353_154132239_154132659_154173822
ES.20410.2	chr2	-	3740	3	Intergenic	novelGene_16867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATTGTATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	154163417	154061450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154064353_154132239_154132659_154162998
ES.20410.3	chr2	-	458	2	Intergenic	novelGene_16869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTACATCTCAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	154065238	154063937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154064353_154065195
ES.20410.4	chr2	-	680	1	Intergenic	novelGene_16870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTCTCCAAAATATAC	9101	False	NA	NA	False	NA	NA	NA	154085733	154085053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154085100_154085700
ES.20411.1	chr2	+	180	1	Intergenic	novelGene_16872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAAGCAAGCAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	154174965	154175145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154175000_154175100
ES.20412.1	chr2	+	174	1	Intergenic	novelGene_16873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAATAAAAAATAAAA	543	False	NA	NA	False	NA	NA	NA	154191813	154191987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154191800_154192000
ES.20413.1	chr2	+	176	1	Intergenic	novelGene_16874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGGTAGAGAATAG	1925	False	NA	NA	False	NA	NA	NA	154204603	154204779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154204600_154204800
ES.20414.1	chr2	+	175	1	Antisense	novelGene_ENSMUSG00000027487.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAGAAAAACAAACAA	786	False	NA	NA	False	NA	NA	NA	154214891	154215066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154214900_154215100
ES.20415.2	chr2	-	2166	13	NNC	ENSMUSG00000027487.12	novel	2160	15	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	26.6734366406397	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	5486	False	NA	-9	True	AATAAA	-18	NA	154214833	154177299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210700_154210836_154212555_154212876_154214600
ES.20415.3	chr2	-	3355	3	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	23878	-6	5503	0	intron_retention	FALSE	canonical	3	96	junction_2	6.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTACTTTTTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	154190761	154177299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154177538_154184220_154184362_154187785
ES.20415.4	chr2	-	2209	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	-51	2	-51	-2	multi-exon	FALSE	canonical	2	7	junction_14	23.0212856251934	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTGTCTACTTTTTT	5338	False	NA	-11	True	AATAAA	-16	NA	154214981	154177301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
ES.20415.7	chr2	-	2037	14	NIC	ENSMUSG00000027487.12	novel	1970	14	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	25.3818180276853	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAATGGCTTCCTTGTC	5707	False	NA	-20	True	AATAAA	-7	NA	154214612	154177310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214501
ES.20416.1	chr2	+	173	1	Intergenic	novelGene_16875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAGAGTCAAAA	6311	False	NA	NA	False	NA	NA	NA	154230067	154230240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154230100_154230200
ES.20416.2	chr2	+	348	1	Intergenic	novelGene_16876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAATAAA	6312	False	NA	NA	False	NA	NA	NA	154230068	154230416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154230100_154230400
ES.20417.1	chr2	+	498	1	Intergenic	novelGene_16878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAACTATGTAGGCTAC	9306	False	NA	NA	False	NA	NA	NA	154233062	154233560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154233100_154233600
ES.20418.1	chr2	+	159	1	Intergenic	novelGene_16879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	154237379	154237538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154237400_154237500
ES.20419.1	chr2	+	182	1	Intergenic	novelGene_16882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154257202	154257384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154257200_154257400
ES.2042.1	chr1	+	176	1	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180466220	180466396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180466200_180466400
ES.20420.1	chr2	+	6069	11	NNC	ENSMUSG00000038533.16	novel	5074	6	NA	NA	-15582	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	157.66169477714	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	4965	False	NA	37	True	AATAAA	-27	NA	154262818	154381276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154262961_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.10	chr2	+	3852	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-94	2311	-80	2081	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCTGGTTGGAGATC	5223	False	NA	NA	False	AATAAA	-22	NA	154278320	154378965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.11	chr2	+	2796	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-88	3361	-74	1031	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCTCTGCCACTGCTTG	5229	False	NA	NA	False	ACTAAA	-28	NA	154278326	154377915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.12	chr2	+	5880	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-64	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	166.542694633546	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTCAAGCTGGAC	5239	False	NA	24	True	AATAAA	-14	NA	154278336	154381263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.13	chr2	+	5611	8	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-64	-11	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	211.74503343331	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCAAGCTGGACCA	5239	False	NA	26	True	AATAAA	-16	NA	154278336	154381265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ES.20420.15	chr2	+	4236	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-65	1898	-51	-1898	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCGGCTTCAGCATCAC	5252	False	NA	NA	False	NA	NA	NA	154278349	154379378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.16	chr2	+	6480	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-50	491	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTGTGACCTGAGGC	5253	False	NA	11	True	ATTAAA	-21	NA	154278350	154381767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.17	chr2	+	6617	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-63	-485	-49	485	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTAAGGTTGTGTGACC	5254	False	NA	5	True	ATTAAA	-15	NA	154278351	154381761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.18	chr2	+	5783	12	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-45	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	155.089576888662	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACTCAAGCTGGACC	5258	False	NA	25	True	AATAAA	-15	NA	154278355	154381264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803_154380672_154381004
ES.20420.19	chr2	+	3046	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-58	3081	-44	1311	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGACCTGTTTTTTTT	5259	False	NA	NA	False	NA	NA	NA	154278356	154378195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.2	chr2	+	527	3	Intergenic	novelGene_16883	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTAAATCTTTAAAAAAA	4972	False	NA	NA	False	NA	NA	NA	154262825	154272483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154262961_154267562_154267668_154272196
ES.20420.20	chr2	+	5975	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-38	-2	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGACCAGACCTGGGG	5265	False	NA	35	True	AATAAA	-25	NA	154278362	154381274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.21	chr2	+	2392	10	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-34	814	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	174.353904317102	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCATGGATCATTTTG	5269	False	NA	NA	False	ATTAAA	-12	NA	154278366	154377698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ES.20420.22	chr2	+	3626	5	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-34	-13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	243.886628374743	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTCAAGCTGGAC	5269	False	NA	24	True	AATAAA	-14	NA	154278366	154381263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154353565_154379350
ES.20420.25	chr2	+	5203	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-30	896	-16	-896	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGGAGGCTTACTTCA	5287	False	NA	NA	False	AATAAA	-18	NA	154278384	154380380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.27	chr2	+	7794	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	422	junction_8	49.9399639567351	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAAGCTGGACCAGAC	5294	False	NA	29	True	AATAAA	-19	NA	154278391	154381268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.29	chr2	+	3637	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-8	2082	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACCTGGTTGGAGATCA	5295	False	NA	NA	False	AATAAA	-23	NA	154278392	154378966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.3	chr2	+	174	2	Intergenic	novelGene_16884	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	737	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	154272314	154417533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154272361_154417405
ES.20420.30	chr2	+	5693	9	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-8	-69	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	207.982233315733	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATATGTATTTAGTTTG	5295	False	NA	-32	True	TATAAA	-14	NA	154278392	154381207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ES.20420.31	chr2	+	5965	12	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	155.089576888662	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTCAAGCTGGACCA	5295	False	NA	26	True	AATAAA	-16	NA	154278392	154381265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803_154377369_154377483
ES.20420.33	chr2	+	4813	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-20	4747	-6	-355	5prime_fragment	FALSE	canonical	3	422	junction_9	51.6952131413383	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGATGTAGAAAATGTTT	5297	False	NA	NA	False	AATAAA	-23	NA	154278394	154376529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
ES.20420.35	chr2	+	3669	8	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	-8	0	-5	0	intron_retention	FALSE	canonical	3	494	junction_7	35.6026827698161	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTCTGATTTAAATTG	5298	False	NA	NA	False	ATTAAA	-15	NA	154278395	154368333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
ES.20420.38	chr2	+	3200	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-3	1650	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATGGATTTAGTGTC	5300	False	NA	NA	False	AATGAA	-42	NA	154278397	154378534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.4	chr2	+	6234	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-165	0	-151	0	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5152	False	NA	37	True	AATAAA	-27	NA	154278249	154381276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.40	chr2	+	1692	6	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	-5	7829	-2	532	5prime_fragment	FALSE	canonical	3	506	junction_3	34.1150992963526	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAATTCTGAAA	5301	False	NA	NA	False	NA	NA	NA	154278398	154360504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628
ES.20420.41	chr2	+	9393	9	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	1	-13	intron_retention	FALSE	canonical	3	63	junction_1	183.305712881514	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTCAAGCTGGAC	5304	False	NA	24	True	AATAAA	-14	NA	154278401	154381263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ES.20420.42	chr2	+	3335	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-4	2738	-4	1654	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGATTTAGTGTCTTTG	5313	False	NA	NA	False	CATAAA	-2	NA	154278410	154378538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.44	chr2	+	2507	11	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	1	800	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	158.544284034461	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTCTTCCCAAGCAT	5318	False	NA	NA	False	AGTAAA	-24	NA	154278415	154377684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359597_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.46	chr2	+	1387	7	NIC	ENSMUSG00000038533.16	novel	3247	9	NA	NA	2	-2117	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	171.55149858473	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACTACACTTATTTAGT	5319	False	NA	NA	False	NA	NA	NA	154278416	154366216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
ES.20420.5	chr2	+	2651	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-155	3573	-141	819	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGATCATTTTGGACAA	5162	False	NA	NA	False	ATTAAA	-17	NA	154278259	154377703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.50	chr2	+	3675	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	2	5863	2	-1471	5prime_fragment	FALSE	canonical	3	422	junction_9	51.6952131413383	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGAGGTCTAGTTGG	5319	False	NA	NA	False	AATAAA	-19	NA	154278416	154375413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
ES.20420.51	chr2	+	1751	10	NNC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	232.52388699807	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAACAGTCTACCACACA	5334	False	NA	10	True	AATAAA	-15	NA	154278431	154373517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154342319_154342464_154346479_154346712_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144
ES.20420.53	chr2	+	6064	12	NNC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.873738732575	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGCTGGACCAGACCT	5352	False	NA	31	True	AATAAA	-21	NA	154278449	154381270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154332223_154332263_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ES.20420.55	chr2	+	2530	10	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	197.081358145298	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACTCAAGCTGGACC	5361	False	NA	25	True	AATAAA	-15	NA	154278458	154381264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154380142
ES.20420.56	chr2	+	6081	12	NNC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	22	-13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	228.144328684155	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTCAAGCTGGAC	5379	False	NA	24	True	AATAAA	-14	NA	154278476	154381263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278557_154336920_154337007_154342319_154342464_154346472_154346715_154352427_154352518_154357735_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ES.20420.57	chr2	+	5461	7	NNC	ENSMUSG00000038533.16	novel	5074	6	NA	NA	-57	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.80341388538	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAAGCTGGACCAGAC	5607	False	NA	29	True	AATAAA	-19	NA	154278704	154381268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154278969_154342319_154342460_154346472_154346715_154352427_154352518_154370756_154370826_154373141_154373333_154376803
ES.20420.58	chr2	+	5239	11	NIC	ENSMUSG00000038533.16	novel	5074	6	NA	NA	-8	-900	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	186.8025963417	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGTCTTGGAGGCTTAC	5656	False	NA	NA	False	AATAAA	-14	NA	154278753	154380376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278969_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ES.20420.59	chr2	+	208	1	Intergenic	novelGene_16889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTGCAAATTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	154292736	154292944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154292700_154292900
ES.20420.6	chr2	+	1686	8	ISM	ENSMUSG00000038533.16	ENSMUST00000099178.10	3247	9	-143	2118	-140	-2118	5prime_fragment	FALSE	canonical	3	494	junction_7	35.6026827698161	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAACTACACTTATTTAG	5163	False	NA	NA	False	NA	NA	NA	154278260	154366215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823
ES.20420.60	chr2	+	5988	1	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	-2104	1793	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTGTCATTTACTTCT	NA	False	NA	NA	False	NA	NA	NA	154355777	154361765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154355800_154361800
ES.20420.61	chr2	+	3530	1	Genic_Genomic	ENSMUSG00000038533.16	novel	NA	NA	NA	NA	541	1641	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCGGGCTGGCAAGATG	NA	False	NA	NA	False	AAAAAG	-4	NA	154366444	154369974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_154366400_154370000
ES.20420.62	chr2	+	7527	2	NNC	ENSMUSG00000038523.11	novel	683	3	NA	NA	-6633	-1736	intron_retention	TRUE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCATGCTCGCTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	154382371	154390002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154385249_154385352
ES.20420.63	chr2	+	5678	1	FSM	ENSMUSG00000078129.4	ENSMUST00000104928.2	1501	1	-3543	-634	-3543	634	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTCTCTGTATAGCCCT	NA	False	NA	NA	False	NA	NA	NA	154390152	154395830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154390200_154395800
ES.20420.64	chr2	+	2495	1	Antisense	novelGene_ENSMUSG00000027490.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGCCTCGGCCGTCTCC	NA	False	NA	NA	False	NA	NA	NA	154411423	154413918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154411400_154413900
ES.20420.65	chr2	+	177	1	Intergenic	novelGene_16893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	154417355	154417532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154417400_154417500
ES.20420.8	chr2	+	1777	9	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	-126	-2	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	148.90553842957	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAACAGTCTACCACACA	5177	False	NA	10	True	AATAAA	-15	NA	154278274	154373517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
ES.20420.9	chr2	+	1897	10	ISM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	-112	7755	-98	2	5prime_fragment	FALSE	canonical	3	422	junction_9	51.6952131413383	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTCTACCACACACACA	5205	False	NA	14	True	AATAAA	-19	NA	154278302	154373521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141
ES.20421.1	chr2	+	162	1	Intergenic	novelGene_16894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154421760	154421922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154421800_154421900
ES.20422.1	chr2	+	159	1	Intergenic	novelGene_16895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	6847	False	NA	NA	False	NA	NA	NA	154435600	154435759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154435600_154435800
ES.20423.1	chr2	+	153	1	Antisense	novelGene_ENSMUSG00000000876.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAACAATT	897	False	NA	NA	False	NA	NA	NA	154437364	154437517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154437400_154437500
ES.20424.1	chr2	+	177	1	Intergenic	novelGene_16896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGGGGGGGGGGG	6240	False	NA	NA	False	NA	NA	NA	154442707	154442884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154442700_154442900
ES.20425.1	chr2	+	3242	15	FSM	ENSMUSG00000059842.13	ENSMUST00000081926.13	3299	15	52	5	-7	-5	multi-exon	FALSE	canonical	2	3	junction_5	3.22062866217014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGCCTGAGTCTCAGA	5774	False	NA	20	True	AATAAA	-30	NA	154455268	154488736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
ES.20425.2	chr2	+	3010	15	NNC	ENSMUSG00000059842.13	novel	3299	15	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.52252228741084	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGAGTCTCAGAGATT	5775	False	NA	24	True	AATAAA	-34	NA	154455269	154488740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154469840_154470740_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
ES.20425.3	chr2	+	3184	16	NNC	ENSMUSG00000059842.13	novel	3299	15	NA	NA	-2	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.73809220503365	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGGGTCCAAACCACCC	5779	False	NA	4	True	AATAAA	-14	NA	154455273	154488720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154469857_154469897_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483337_154483901_154484035_154485408_154485521_154485706_154485778_154487543
ES.20425.4	chr2	+	2624	1	NIC	ENSMUSG00000059842.13	novel	3299	15	NA	NA	22928	-7857	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	5939	False	NA	NA	False	NA	NA	NA	154478217	154480841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154478200_154480800
ES.20425.5	chr2	+	2448	1	NIC	ENSMUSG00000059842.13	novel	3299	15	NA	NA	30999	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGCCTGAGTCTCAGA	NA	False	NA	20	True	AATAAA	-30	NA	154486288	154488736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154486300_154488700
ES.20426.1	chr2	+	1660	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	-47	3	-47	2	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCTGTGTGTTCAGTC	NA	False	NA	27	True	ATTAAA	-19	NA	154498890	154536702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ES.20426.2	chr2	+	1097	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	-1	520	-1	-16	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGAGTTGCTGGGCTG	NA	False	NA	9	True	AATAAA	-17	NA	154498936	154536185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ES.20426.3	chr2	+	191	1	Intergenic	novelGene_16899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAAGTACTA	NA	False	NA	NA	False	NA	NA	NA	154515115	154515306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154515100_154515300
ES.20426.4	chr2	+	233	1	Intergenic	novelGene_16900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGAATTTGAGTCAT	NA	False	NA	NA	False	TTTAAA	-24	NA	154520609	154520842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154520600_154520800
ES.20426.5	chr2	+	2751	5	NNC	ENSMUSG00000038467.16	novel	720	3	NA	NA	-9670	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9910700045568	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGAGTTGCTGGGCTG	NA	False	NA	9	True	AATAAA	-17	NA	154523319	154536185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154525329_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ES.20427.11	chr2	-	2143	10	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-13135	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	57.7365237335909	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAGCCTGGCATCATG	NA	False	NA	-14	True	AATAAA	-15	NA	154263154	154218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154254470_154254644_154261900_154262132_154263111
ES.20427.12	chr2	-	179	1	Intergenic	novelGene_16877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGTGGATTCTGT	NA	False	NA	NA	False	NA	NA	NA	154230932	154230753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154230800_154230900
ES.20427.13	chr2	-	2088	3	FSM	ENSMUSG00000027488.13	ENSMUST00000133018.2	1438	3	-11	-639	-11	639	multi-exon	FALSE	canonical	1	1	junction_1	49.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGTGACAGCTTTAAA	NA	False	NA	NA	False	AATAGA	-18	NA	154249911	154240609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154242200_154245641_154245828_154249599
ES.20427.14	chr2	-	865	3	Intergenic	novelGene_16880	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	2	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATATATATATATTG	NA	False	NA	NA	False	NA	NA	NA	154263321	154254219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154254644_154261900_154262132_154263111
ES.20427.15	chr2	-	158	1	Intergenic	novelGene_16881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154255292	154255134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154255100_154255300
ES.20427.16	chr2	-	157	2	Antisense	novelGene_ENSMUSG00000038533.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	4715	False	NA	NA	False	NA	NA	NA	154299132	154255134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_154255274_154299114
ES.20427.17	chr2	-	499	1	Intergenic	novelGene_16885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAGAAACCCC	9166	False	NA	NA	False	NA	NA	NA	154276394	154275895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154275900_154276400
ES.20427.18	chr2	-	175	1	Intergenic	novelGene_16886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	2082	False	NA	NA	False	NA	NA	NA	154283478	154283303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154283300_154283500
ES.20427.19	chr2	-	4599	1	Intergenic	novelGene_16887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154288412	154283813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154283800_154288400
ES.20427.20	chr2	-	2095	1	Intergenic	novelGene_16888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGTGGTGGCACACGCC	NA	False	NA	NA	False	NA	NA	NA	154288412	154286317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154286300_154288400
ES.20427.3	chr2	-	2862	7	NIC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-46	-9	intron_retention	FALSE	canonical	3	100	junction_6	14.6855938479405	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGCATCATGTCTGTG	NA	False	NA	-8	True	AATAAA	-21	NA	154249946	154218241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154218829_154218926_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ES.20427.4	chr2	-	1159	5	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.2450871254468	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGCATCATGTCTGTG	NA	False	NA	-8	True	AATAAA	-21	NA	154250008	154218241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222686_154249913
ES.20427.7	chr2	-	1987	8	NNC	ENSMUSG00000027488.13	novel	2131	8	NA	NA	-1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.8989267109997	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAGCCTGGCATCATG	NA	False	NA	-14	True	AATAAA	-15	NA	154250020	154218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225813_154245641_154245790_154249599
ES.20427.9	chr2	-	2423	5	ISM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	25863	15	25744	-15	3prime_fragment	FALSE	canonical	3	110	junction_1	13.5922772190682	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAGCCTGGCATCATG	NA	False	NA	-14	True	AATAAA	-15	NA	154224156	154218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830
ES.20428.1	chr2	-	5432	2	Intergenic	novelGene_16890	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1068	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAGAAAGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	154510700	154320273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154320491_154505485
ES.20428.10	chr2	-	1852	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	11.513277359447	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCTCTTGTCTGTCTG	7334	False	NA	-5	True	AATAAA	-34	NA	154400763	154386308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20428.12	chr2	-	1815	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	8	6	-6	-6	multi-exon	FALSE	canonical	3	34	junction_6	10.0840220150494	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTCTCTCTCTCCCCT	7319	False	NA	-21	True	AATAAA	-18	NA	154400778	154386324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20428.13	chr2	-	1921	12	NIC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	2	-7	intron_retention	FALSE	canonical	3	34	junction_5	10.2457409010559	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTCTCTCTCTCTCCCC	7289	False	NA	-22	True	AATAAA	-17	NA	154400808	154386325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20428.14	chr2	-	2101	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	95	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.7275791874503	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTCTCTCTCTCTCCCC	7428	False	NA	-22	True	AATAAA	-17	NA	154400669	154386325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400261
ES.20428.15	chr2	-	1776	12	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.3291103413978	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTCTCTCTCTCCC	7290	False	NA	-23	True	AATAAA	-16	NA	154400807	154386326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154398969_154399002_154400657
ES.20428.16	chr2	-	1871	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.7969473800448	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGGTCTCTCTCTCTCC	7334	False	NA	-24	True	AATAAA	-15	NA	154400763	154386327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154389778_154389962_154396566_154396665_154396819_154396846_154398976_154399002_154400657
ES.20428.17	chr2	-	2994	11	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-1	-10	intron_retention	FALSE	non_canonical	0	0	junction_6	24.9447389242702	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTCTCTCTCTCTC	7324	False	NA	-25	True	AATAAA	-14	NA	154400773	154386328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154389076_154389344_154389843_154395968_154396665_154396819_154396846_154397503_154397613_154398980_154399002_154400657
ES.20428.19	chr2	-	3000	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	3	intron_retention	FALSE	canonical	0	0	junction_3	402.755806910341	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGTGTCGAATGCT	9540	False	NA	0	True	AGTAAA	-17	NA	154411774	154401323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.2	chr2	-	203	1	Intergenic	novelGene_16891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	154320496	154320293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154320300_154320500
ES.20428.20	chr2	-	4175	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	36	3	intron_retention	FALSE	canonical	3	965	junction_5	34.3359869524672	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGTGTCGAATGCT	9538	False	NA	0	True	AGTAAA	-17	NA	154411776	154401323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.22	chr2	-	3803	5	ISM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	4213	-1	4041	1	intron_retention	FALSE	canonical	0	0	junction_3	441.048183308808	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTGTGTCGAATG	8865	False	NA	-2	True	AGTAAA	-15	NA	154407599	154401325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814
ES.20428.23	chr2	-	3134	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-151	-228	21	1	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTGTGTCGAATG	9523	False	NA	-2	True	AGTAAA	-15	NA	154411791	154401325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ES.20428.24	chr2	-	2789	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_2	403.228272818264	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTTGTGTCGAATG	9541	False	NA	-2	True	AGTAAA	-15	NA	154411773	154401325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.29	chr2	-	2763	8	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	-58103	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	453.49652924892	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGTTTGTGTCGAA	NA	False	NA	-4	True	AGTAAA	-13	NA	154469915	154401327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408_154411775_154469845
ES.20428.3	chr2	-	2199	4	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	73187	intron_retention	FALSE	non_canonical	0	0	junction_1	480.753806248294	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAAGTCTTTTAA	9540	False	NA	NA	False	NA	NA	NA	154411774	154328139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154328343_154403994_154405011_154405814_154406429_154411408
ES.20428.30	chr2	-	2608	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	-22	146	-22	81	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTCAGTTTGTAA	9480	False	NA	60	True	NA	NA	NA	154411834	154401472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.31	chr2	-	2920	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-163	-2	9	2	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGTTTGAAACTCTCC	9511	False	NA	-19	True	AATAAA	-18	NA	154411803	154401551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ES.20428.32	chr2	-	2475	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	374.662255312108	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9535	False	NA	-21	True	AATAAA	-16	NA	154411779	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403171_154403266_154403377_154404849_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.33	chr2	-	2730	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	0	intron_retention	TRUE	non_canonical	0	0	junction_1	473.966741683657	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9540	False	NA	-21	True	AATAAA	-16	NA	154411774	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402305_154402344_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.34	chr2	-	2760	6	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	0	intron_retention	FALSE	canonical	0	0	junction_2	494.790703227132	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403162_154403266_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.35	chr2	-	2770	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	0	intron_retention	FALSE	canonical	0	0	junction_3	402.755806910341	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9540	False	NA	-21	True	AATAAA	-16	NA	154411774	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.36	chr2	-	3945	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	36	0	intron_retention	FALSE	canonical	3	965	junction_5	34.3359869524672	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9538	False	NA	-21	True	AATAAA	-16	NA	154411776	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.4	chr2	-	4653	2	Genic_Genomic	ENSMUSG00000027490.18	novel	2732	7	NA	NA	3165	73156	multi-exon	FALSE	non_canonical	0	0	junction_1	0	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7989	False	NA	NA	False	NA	NA	NA	154408475	154328170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_154328343_154403994
ES.20428.40	chr2	-	2463	7	NNC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	477.324138645149	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9538	False	NA	-21	True	AATAAA	-16	NA	154411776	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411414
ES.20428.41	chr2	-	3191	6	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	39	0	intron_retention	FALSE	canonical	0	0	junction_3	479.623435624241	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154410986
ES.20428.42	chr2	-	2561	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	0	intron_retention	FALSE	canonical	0	0	junction_2	403.228272818264	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.43	chr2	-	5049	4	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	39	0	intron_retention	FALSE	canonical	3	965	junction_3	12.0277457017791	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9541	False	NA	-21	True	AATAAA	-16	NA	154411773	154401553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154406429_154411408
ES.20428.44	chr2	-	2883	5	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_2	437.939136753042	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCTGGGTTTGAAACTC	9522	False	NA	-22	True	AATAAA	-15	NA	154411792	154401554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.45	chr2	-	4249	5	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	34	-1	intron_retention	FALSE	canonical	3	965	junction_4	38.2516339520288	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCTGGGTTTGAAACTC	9536	False	NA	-22	True	AATAAA	-15	NA	154411778	154401554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406429_154411408
ES.20428.47	chr2	-	4340	4	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-2	intron_retention	FALSE	canonical	3	965	junction_3	43.2768863123133	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTGGGTTTGAAACT	9540	False	NA	-23	True	AATAAA	-14	NA	154411774	154401555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154405011_154405814_154406429_154411408
ES.20428.48	chr2	-	4154	6	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	3157	2	3157	-2	3prime_fragment	FALSE	canonical	0	0	junction_3	405.437738746654	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTGGGTTTGAAACT	7981	False	NA	-23	True	AATAAA	-14	NA	154408483	154401555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337
ES.20428.5	chr2	-	365	1	Intergenic	novelGene_16892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTACAAGCCAGGAGTT	NA	False	NA	NA	False	AATAAA	-38	NA	154374706	154374341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154374300_154374700
ES.20428.51	chr2	-	2100	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	-23	655	-23	-428	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9479	False	NA	-2	True	NA	NA	NA	154411835	154401981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.53	chr2	-	2342	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-428	intron_retention	FALSE	canonical	0	0	junction_3	402.755806910341	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9540	False	NA	-2	True	NA	NA	NA	154411774	154401981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
ES.20428.55	chr2	-	2028	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	40	-428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	474.649139423591	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9542	False	NA	-2	True	NA	NA	NA	154411772	154401981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403162_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.57	chr2	-	2461	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-134	428	38	-428	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9540	False	NA	-2	True	NA	NA	NA	154411774	154401981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ES.20428.58	chr2	-	3937	6	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	38	-428	intron_retention	FALSE	canonical	3	80	junction_5	373.526652328853	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9540	False	NA	-2	True	NA	NA	NA	154411774	154401981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154410986
ES.20428.6	chr2	-	6384	15	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	-18	4661	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	22.1019206848451	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATGTCCATTCTGTGG	7269	False	NA	NA	False	NA	NA	NA	154400828	154381657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154382049_154382093_154385267_154385369_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20428.61	chr2	-	2759	6	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	40	-431	intron_retention	FALSE	canonical	0	0	junction_3	479.623435624241	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGGAGCGTTTATTTA	9542	False	NA	-5	True	NA	NA	NA	154411772	154401984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154410986
ES.20428.62	chr2	-	7316	5	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	-133	433	39	-433	intron_retention	FALSE	canonical	0	0	junction_3	441.048183308808	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAATGGAGCGTTTATT	9541	False	NA	-7	True	NA	NA	NA	154411773	154401986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814
ES.20428.63	chr2	-	1965	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	43	-434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	470.212363370708	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAATGGAGCGTTTAT	9545	False	NA	-8	True	NA	NA	NA	154411769	154401987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403108_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.64	chr2	-	7107	5	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	39	-435	intron_retention	FALSE	canonical	0	0	junction_2	441.830567072945	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAATGGAGCGTTTA	9541	False	NA	-9	True	NA	NA	NA	154411773	154401988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403382_154404857_154405011_154405814_154406035_154406337
ES.20428.66	chr2	-	1985	7	NNC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	40	-435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	471.623702401254	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAATGGAGCGTTTA	9542	False	NA	-9	True	NA	NA	NA	154411772	154401988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406382_154406429_154411408
ES.20428.67	chr2	-	3811	5	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-435	intron_retention	FALSE	canonical	3	965	junction_4	38.2516339520288	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAATGGAGCGTTTA	9540	False	NA	-9	True	NA	NA	NA	154411774	154401988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406429_154411408
ES.20428.68	chr2	-	8486	5	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	39	-436	intron_retention	FALSE	canonical	3	990	junction_2	32.4114177412837	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTTAATGGAGCGTTT	9541	False	NA	-10	True	NA	NA	NA	154411773	154401989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337
ES.20428.69	chr2	-	3507	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-436	intron_retention	FALSE	canonical	3	965	junction_5	34.3359869524672	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTTAATGGAGCGTTT	9540	False	NA	-10	True	NA	NA	NA	154411774	154401989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.7	chr2	-	6487	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	1	4596	intron_retention	FALSE	canonical	0	0	junction_1	23.0181088131352	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCACAAGCTCAAGTATG	7334	False	NA	NA	False	AGTAAA	-11	NA	154400763	154381722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154382049_154382093_154385267_154385369_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20428.71	chr2	-	1526	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	39	1167	39	-940	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAATAGCTTCTAGCTCT	9541	False	NA	NA	False	NA	NA	NA	154411773	154402493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.72	chr2	-	1558	3	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	-4	-2921	intron_retention	FALSE	canonical	3	965	junction_2	51	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAAACGCTGGGC	9498	False	NA	NA	False	NA	NA	NA	154411816	154404474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154405011_154405814_154406429_154411408
ES.20428.73	chr2	-	5189	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	1977	-2921	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	892	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAAACGCTGGGC	6801	False	NA	NA	False	NA	NA	NA	154409663	154404474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154404500_154409700
ES.20428.74	chr2	-	1213	4	ISM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	38	3148	38	-2921	5prime_fragment	FALSE	canonical	3	965	junction_3	42.6953028902348	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAAACGCTGGGC	9540	False	NA	NA	False	NA	NA	NA	154411774	154404474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154405011_154405814_154406035_154406337_154406429_154411408
ES.20428.75	chr2	-	2713	2	NIC	ENSMUSG00000027490.18	novel	2755	7	NA	NA	40	-2948	intron_retention	FALSE	canonical	3	80	junction_1	0	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9542	False	NA	NA	False	NA	NA	NA	154411772	154404501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154406429_154410986
ES.20428.76	chr2	-	3741	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	3156	-3190	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGACCTGGCTCTACA	7980	False	NA	NA	False	NA	NA	NA	154408484	154404743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154404700_154408500
ES.20428.77	chr2	-	2541	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	38	-7680	mono-exon	FALSE	NA	NA	NA	NA	NA	858	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAC	9540	False	NA	NA	False	NA	NA	NA	154411774	154409233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154409200_154411800
ES.20428.78	chr2	-	1435	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	49	-8775	mono-exon	FALSE	NA	NA	NA	NA	NA	857	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTTTTGAGGATGTT	9551	False	NA	NA	False	NA	NA	NA	154411763	154410328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154410300_154411800
ES.20428.79	chr2	-	1977	5	NNC	ENSMUSG00000000876.12	novel	2789	4	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.6671781976525	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGCTTTGCAGTCGTT	NA	False	NA	NA	False	NA	NA	NA	154445615	154427678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154428278_154429075_154430013_154434084_154434284_154438121_154438185_154445436
ES.20428.8	chr2	-	4031	5	FSM	ENSMUSG00000027489.16	ENSMUST00000130824.2	531	5	-23	-3477	-23	2831	multi-exon	FALSE	canonical	3	53	junction_1	9.08295106229247	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATAATCTACCCTGATT	NA	False	NA	NA	False	NA	NA	NA	154388737	154383487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589
ES.20428.80	chr2	-	1683	3	NNC	ENSMUSG00000000876.12	novel	2789	4	NA	NA	11077	-913	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	77	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATATATTTTGCCTGCA	NA	False	NA	2	True	NA	NA	NA	154434531	154428590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154430013_154434084_154434284_154434469
ES.20428.81	chr2	-	1982	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-118	925	-118	-925	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAATCTTAATCATAT	NA	False	NA	-10	True	NA	NA	NA	154445746	154428602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ES.20428.82	chr2	-	1463	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	34	1292	14	-1292	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154445594	154428969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ES.20428.83	chr2	-	986	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	-24	1827	-24	-1827	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTCTGTGGCTTGATT	NA	False	NA	0	True	NA	NA	NA	154445652	154429504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ES.20428.84	chr2	-	560	3	FSM	ENSMUSG00000000876.12	ENSMUST00000109703.3	560	3	-12	12	8	-12	multi-exon	FALSE	canonical	0	0	junction_1	94.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGTCTAAGTTGCAAG	NA	False	NA	NA	False	AATAAA	-18	NA	154445620	154437177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154437491_154438121_154438185_154445436
ES.20428.85	chr2	-	157	1	Intergenic	novelGene_16897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	154449706	154449549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154449500_154449700
ES.20428.9	chr2	-	4184	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	8	-2363	-6	2363	multi-exon	FALSE	canonical	3	34	junction_6	10.0840220150494	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTTTAGTGATGTGTA	7319	False	NA	NA	False	NA	NA	NA	154400778	154383955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ES.20429.1	chr2	-	2270	1	Intergenic	novelGene_16898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTTGGTGGTGCAC	NA	False	NA	NA	False	AATAAA	-33	NA	154516606	154514336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154514300_154516600
ES.2043.1	chr1	+	3534	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	-374	0	-374	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468340	180518252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.10	chr1	+	2397	12	NNC	ENSMUSG00000058729.14	novel	1660	12	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.6642122895054	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAATGCTGTCTGAGA	NA	False	NA	1	True	AATAAA	-11	NA	180468907	180518244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180516990
ES.2043.12	chr1	+	2984	15	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	32.0905129346379	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468907	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180475865_180475899_180478287_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.13	chr1	+	2861	14	NIC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	33.5774297256691	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468916	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180468963_180475865_180475899_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.14	chr1	+	2665	2	ISM	ENSMUSG00000058729.14	ENSMUST00000194373.6	708	3	3	-1732	-2	1732	intron_retention	FALSE	canonical	3	75	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTAGGTATTTTCATT	NA	False	NA	NA	False	GATAAA	-29	NA	180468922	180478490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180468963_180475865
ES.2043.15	chr1	+	2809	14	NIC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.0792485765704	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGCTGTCTGAGAAT	NA	False	NA	3	True	AATAAA	-13	NA	180468925	180518246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.17	chr1	+	2245	15	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	3	-715	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	32.0905129346379	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTATAAAAGCTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	180468933	180517537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180475865_180475899_180478287_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.18	chr1	+	363	3	NNC	ENSMUSG00000058729.14	novel	708	3	NA	NA	3	-6621	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCCCCAACAGGAAG	NA	False	NA	NA	False	AATAAA	-26	NA	180468933	180470137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469481_180469558_180469879
ES.2043.19	chr1	+	2989	15	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.8525716665301	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468933	180518252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.2	chr1	+	3323	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	31.7940595429747	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468627	180518252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469481_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.20	chr1	+	3073	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.1455951469899	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468934	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479434_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.21	chr1	+	2019	8	NNC	ENSMUSG00000058729.14	novel	2017	11	NA	NA	4	-6956	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	43.6002246764479	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATCACTTCAATTTTG	NA	False	NA	NA	False	NA	NA	NA	180468934	180494702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347
ES.2043.22	chr1	+	2129	15	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	6	28	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	32.9040038504094	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTCTGAGGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	180468936	180516460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469481_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827
ES.2043.23	chr1	+	2695	12	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-9538	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.5534750309567	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180479503	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516842
ES.2043.24	chr1	+	3669	4	FSM	ENSMUSG00000058729.14	ENSMUST00000194847.2	2037	4	-1634	2	-207	-2	multi-exon	FALSE	canonical	3	104	junction_3	9.41629792788369	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180506817	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.3	chr1	+	3262	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	-56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.9193356179639	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTGTCTGAGAATCTT	NA	False	NA	6	True	AATAAA	-16	NA	180468658	180518249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469508_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.4	chr1	+	2996	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	-15	179	-15	-179	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCTTGAAATTTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	180468699	180518073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.5	chr1	+	5568	15	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_11	42.1832735978204	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468900	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180475865_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180509614_180509803_180515524_180515705_180515827_180515926_180516832
ES.2043.6	chr1	+	3111	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468906	180518252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.8	chr1	+	2765	13	NIC	ENSMUSG00000058729.14	novel	2878	14	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	33.1268605347517	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468907	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180468963_180475865_180475899_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.2043.9	chr1	+	3127	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	40.6041048827989	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTCTGAGAATCTTA	NA	False	NA	7	True	AATAAA	-17	NA	180468907	180518250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478287_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ES.20430.1	chr2	-	179	1	Intergenic	novelGene_16901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	154589796	154589617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154589600_154589800
ES.20431.1	chr2	+	179	1	Intergenic	novelGene_16902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGGGT	4649	False	NA	NA	False	NA	NA	NA	154608672	154608851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154608700_154608900
ES.20431.10	chr2	+	3618	8	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	129	junction_2	15.0142789180357	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTCTGAGGTGGAATG	NA	False	NA	5	True	AATAAA	-15	NA	154633276	154709163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.11	chr2	+	4803	2	NNC	ENSMUSG00000027593.16	novel	337	3	NA	NA	-1	-45760	intron_retention	FALSE	canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGGTAATGTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	154633287	154644651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154637980_154644540
ES.20431.12	chr2	+	1127	2	Intergenic	novelGene_16905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATGTATTAAAATTA	NA	False	NA	NA	False	NA	NA	NA	154643307	154644654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154643619_154643838
ES.20431.13	chr2	+	172	1	Intergenic	novelGene_16906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	154644233	154644405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154644200_154644400
ES.20431.14	chr2	+	4295	1	Intergenic	novelGene_16907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTAAGGTTGGCTG	NA	False	NA	NA	False	NA	NA	NA	154650805	154655100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154650800_154655100
ES.20431.15	chr2	+	5757	1	Intergenic	novelGene_16908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGGTTGGGTGTGGTA	5816	False	NA	NA	False	NA	NA	NA	154656732	154662489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154656700_154662500
ES.20431.16	chr2	+	1783	7	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	65581	20	65023	-3	3prime_fragment	FALSE	canonical	3	130	junction_4	14.6363322667334	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	4442	False	NA	3	True	AATAAA	-13	NA	154698657	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.2	chr2	+	157	2	Antisense	novelGene_ENSMUSG00000098640.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATAAATAAATCTTTT	4652	False	NA	NA	False	NA	NA	NA	154608675	154683911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154608800_154683878
ES.20431.3	chr2	+	1745	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	-33	-3	-33	3	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGTGGAATGGTTTG	NA	False	NA	10	True	AATAAA	-20	NA	154632982	154709168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.4	chr2	+	1809	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	-70	8	-9	8	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGAATGGTTTGCTTGT	NA	False	NA	15	True	AATAAA	-25	NA	154633006	154709173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.5	chr2	+	1467	9	NIC	ENSMUSG00000027593.16	novel	1747	9	NA	NA	4	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.2965856472031	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	NA	False	NA	3	True	AATAAA	-13	NA	154633019	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.6	chr2	+	1504	10	NIC	ENSMUSG00000027593.16	novel	1802	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	57.8369355266262	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	NA	False	NA	3	True	AATAAA	-13	NA	154633030	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154633152_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.7	chr2	+	1715	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	24	20	1	-3	multi-exon	FALSE	canonical	3	28	junction_3	53.4051437129421	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	NA	False	NA	3	True	AATAAA	-13	NA	154633053	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.8	chr2	+	1580	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	219	3	0	-3	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	NA	False	NA	3	True	AATAAA	-13	NA	154633271	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20431.9	chr2	+	1367	9	NNC	ENSMUSG00000027593.16	novel	1759	9	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.8508900096093	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTCTGAGGTGGAA	NA	False	NA	3	True	AATAAA	-13	NA	154633276	154709161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154633469_154699188_154699329_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ES.20432.1	chr2	-	155	1	Intergenic	novelGene_16903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAATCTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	154614666	154614511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154614500_154614700
ES.20433.1	chr2	-	177	1	Intergenic	novelGene_16904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTTAAATCTG	3140	False	NA	NA	False	NA	NA	NA	154629512	154629335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154629300_154629500
ES.20434.1	chr2	-	242	1	Intergenic	novelGene_16909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGCTGGAGCAGGCGCT	NA	False	NA	NA	False	NA	NA	NA	154667574	154667332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154667300_154667600
ES.20435.1	chr2	-	180	1	Intergenic	novelGene_16910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	5741	False	NA	NA	False	NA	NA	NA	154685514	154685334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154685300_154685500
ES.20436.1	chr2	+	3624	1	Antisense	novelGene_ENSMUSG00000074656.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTCATAAACAGTTCT	NA	False	NA	NA	False	NA	NA	NA	154709811	154713435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154709800_154713400
ES.20437.1	chr2	+	988	9	Antisense	novelGene_ENSMUSG00000074656.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGCGAAAGGGAGCGACA	NA	False	NA	NA	False	NA	NA	NA	154714765	154734738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154714821_154715468_154715556_154718537_154718593_154719590_154719740_154720389_154720485_154726230_154726361_154729617_154729728_154730102_154730283_154734611
ES.20437.4	chr2	+	5462	1	Antisense	novelGene_ENSMUSG00000074656.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154727503	154732965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_154727500_154733000
ES.20438.1	chr2	-	5741	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	2	3397	at_least_one_novel_splicesite	FALSE	non_canonical	2	766	junction_1	3933.41529418687	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTAGAGTTGCATTAA	3761	False	NA	NA	False	AATAAA	-29	NA	154734726	154709932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.10	chr2	-	2393	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5322.29797440871	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCTCCATTGCTTTTG	3700	False	NA	-14	True	AATAAA	-26	NA	154734787	154713335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734615
ES.20438.12	chr2	-	2472	9	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	4355.96415131025	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3736	False	NA	-16	True	AATAAA	-24	NA	154734751	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718635_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.14	chr2	-	1330	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4169.46393510879	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3744	False	NA	-16	True	AATAAA	-24	NA	154734743	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154713588_154714679_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.15	chr2	-	3055	9	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	2	0	intron_retention	FALSE	non_canonical	1	4	junction_7	5639.45775180336	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3761	False	NA	-16	True	AATAAA	-24	NA	154734726	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730031_154730281_154734609
ES.20438.16	chr2	-	2713	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5423.60630558899	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3964	False	NA	-16	True	AATAAA	-24	NA	154734523	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714090_154714159_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734028
ES.20438.17	chr2	-	4773	6	NIC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-47	0	intron_retention	FALSE	canonical	3	11792	junction_4	973.526866604101	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3689	False	NA	-16	True	AATAAA	-24	NA	154734798	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154715555_154718535_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.2	chr2	-	2485	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	61	-4	-43	4	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTTGTGTGTTGTGT	3693	False	NA	-4	True	AATAAA	-36	NA	154734794	154713325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.21	chr2	-	2317	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5372.54735773554	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3750	False	NA	-16	True	AATAAA	-24	NA	154734737	154713337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729710_154730114_154730281_154734609
ES.20438.24	chr2	-	6319	8	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	2	766	junction_1	4382.1671229972	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGCTCCATTGCTT	3756	False	NA	-17	True	AATAAA	-23	NA	154734731	154713338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.26	chr2	-	3141	8	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_2	4631.67315384858	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGCTCCATTGCTT	3714	False	NA	-17	True	AATAAA	-23	NA	154734773	154713338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154715555_154718535_154718635_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.29	chr2	-	3054	9	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	260	junction_8	4307.853872217	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGCTCCATTGCTT	3692	False	NA	-17	True	AATAAA	-23	NA	154734795	154713338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734028
ES.20438.3	chr2	-	2449	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	766	junction_1	3933.41529418687	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGCTTTTGTGTGTTGT	3658	False	NA	-6	True	AATAAA	-34	NA	154734829	154713327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.31	chr2	-	2353	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	326	junction_6	5127.30789468641	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGCTCCATTGCTT	3737	False	NA	-17	True	AATAAA	-23	NA	154734750	154713338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720479_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.32	chr2	-	2304	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5372.54735773554	3131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTGCTCCATTGCTT	3773	False	NA	-17	True	AATAAA	-23	NA	154734714	154713338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729721_154730114_154730281_154734609
ES.20438.36	chr2	-	2370	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4169.46393510879	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTAGTGCTCCATTGC	3731	False	NA	-19	True	AATAAA	-21	NA	154734756	154713340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714082_154714143_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.37	chr2	-	8720	8	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-4	-3	intron_retention	FALSE	non_canonical	2	766	junction_1	4274.95348106925	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTAGTGCTCCATTGC	3768	False	NA	-19	True	AATAAA	-21	NA	154734719	154713340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154715555_154718535_154718593_154719590_154719740_154720389_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.38	chr2	-	2991	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	8	-10	intron_retention	FALSE	non_canonical	2	766	junction_1	4159.7041492605	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTGTAACTAGTGCT	3744	False	NA	-26	True	AATAAA	-14	NA	154734743	154713347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714089_154714157_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.41	chr2	-	1580	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	22	940	22	-932	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGGCTGTGGCAAGT	3654	False	NA	62	True	AATAAA	-41	NA	154734833	154714269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.43	chr2	-	1511	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-40	-953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4392.21221133212	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAACAAACTT	3696	False	NA	41	True	AATAAA	-20	NA	154734791	154714290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734615
ES.20438.45	chr2	-	1519	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	-953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4355.96415131025	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAACAAACTT	3736	False	NA	41	True	AATAAA	-20	NA	154734751	154714290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718635_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.46	chr2	-	1345	8	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	2	-953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4645.96850912219	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAACAAACTT	3761	False	NA	41	True	AATAAA	-20	NA	154734726	154714290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154719640_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.47	chr2	-	1447	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	-953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4392.21221133212	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAACAAACTT	3759	False	NA	41	True	AATAAA	-20	NA	154734728	154714290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730274_154734609
ES.20438.53	chr2	-	1206	8	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	4570	-1005	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	4691.48418272242	3119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTCCTTCAGTTTTCT	8355	False	NA	-11	True	ATTAAA	-29	NA	154730132	154714342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730031
ES.20438.58	chr2	-	7813	7	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	1	-1012	intron_retention	FALSE	canonical	3	11792	junction_5	612.875735093719	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCGATCTGTCCTTCA	3737	False	NA	-18	True	ATTAAA	-22	NA	154734750	154714349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.59	chr2	-	7159	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	-1017	intron_retention	FALSE	canonical	3	11792	junction_6	643.263934785651	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAAGTCGATCTGTC	3736	False	NA	-23	True	ATTAAA	-17	NA	154734751	154714354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.6	chr2	-	4095	7	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	11792	junction_5	900.379256511141	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCATTGCTTTTGTGTG	3725	False	NA	-10	True	AATAAA	-30	NA	154734762	154713331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.60	chr2	-	5756	8	ISM	ENSMUSG00000074656.13	ENSMUST00000166171.8	2312	10	-63	1017	-14	-1017	intron_retention	FALSE	canonical	3	11792	junction_7	900.750072926753	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAAGTCGATCTGTC	3722	False	NA	-23	True	ATTAAA	-17	NA	154734765	154714354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102
ES.20438.62	chr2	-	8422	6	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-3	-1019	intron_retention	FALSE	canonical	3	11792	junction_4	666.72255099104	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3769	False	NA	-25	True	ATTAAA	-15	NA	154734718	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154715555_154718535_154718593_154719590_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.63	chr2	-	2359	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	1	-1019	intron_retention	FALSE	canonical	3	11792	junction_6	869.212240115926	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3786	False	NA	-25	True	ATTAAA	-15	NA	154734701	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.64	chr2	-	1396	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	11	-1019	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4386.11704522064	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3747	False	NA	-25	True	ATTAAA	-15	NA	154734740	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726360_154729620_154729728_154730102_154730281_154734609
ES.20438.66	chr2	-	1312	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-5	-1019	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4686.11925079303	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3731	False	NA	-25	True	ATTAAA	-15	NA	154734756	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154730102_154730281_154734609
ES.20438.67	chr2	-	1420	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-16	-1019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4417.94592401265	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3720	False	NA	-25	True	ATTAAA	-15	NA	154734767	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718542_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.68	chr2	-	1399	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	1	-1019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4417.94592401265	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3737	False	NA	-25	True	ATTAAA	-15	NA	154734750	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715544_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.7	chr2	-	5390	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	2	4	intron_retention	FALSE	canonical	3	11792	junction_6	821.184584882704	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCCATTGCTTTTGTG	3761	False	NA	-12	True	AATAAA	-28	NA	154734726	154713333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.70	chr2	-	2727	5	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	4987	-1019	intron_retention	FALSE	canonical	3	12105	junction_2	940.287555750899	3119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	8772	False	NA	-25	True	ATTAAA	-15	NA	154729715	154714356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154720485_154726230_154726367_154729623
ES.20438.72	chr2	-	1415	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-2	-1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4408.33670270035	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3757	False	NA	-26	True	ATTAAA	-14	NA	154734730	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714847_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.74	chr2	-	1334	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	20	-1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4355.96415131025	3121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3805	False	NA	-26	True	ATTAAA	-14	NA	154734682	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719597_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.75	chr2	-	1837	10	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	-37	-1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5423.60630558899	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3699	False	NA	-26	True	ATTAAA	-14	NA	154734788	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734028_154734419_154734609
ES.20438.77	chr2	-	3756	6	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	-50	-1020	intron_retention	FALSE	canonical	3	11792	junction_4	973.526866604101	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3686	False	NA	-26	True	ATTAAA	-14	NA	154734801	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154715555_154718535_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.80	chr2	-	1760	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	2	-1020	intron_retention	FALSE	canonical	3	12105	junction_2	751.289829668461	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3761	False	NA	-26	True	ATTAAA	-14	NA	154734726	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154730281_154734609
ES.20438.81	chr2	-	2033	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	2	-1020	intron_retention	FALSE	canonical	3	11792	junction_6	877.543138075658	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGAAGTCGATCT	3761	False	NA	-26	True	ATTAAA	-14	NA	154734726	154714357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.82	chr2	-	6759	1	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	13583	-1023	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATTCTTTGAAGTCGA	NA	False	NA	-29	True	ATTAAA	-11	NA	154721119	154714360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154714400_154721100
ES.20438.84	chr2	-	1437	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	64	1041	-40	-1033	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTATAACAGTAATTCT	3696	False	NA	-39	True	ATTAAA	-1	NA	154734791	154714370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.85	chr2	-	1348	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	45	1149	45	-1141	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	3118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATACTCGTTGCCTACT	3677	False	NA	NA	False	NA	NA	NA	154734810	154714478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.86	chr2	-	819	6	ISM	ENSMUSG00000074656.13	ENSMUST00000166171.8	2312	10	-7	6196	6	-6196	5prime_fragment	FALSE	canonical	3	11792	junction_4	905.063445289887	3079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGGAATGTTAAATGTCT	3778	False	NA	NA	False	AATAAA	-22	NA	154734709	154719533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.87	chr2	-	482	4	ISM	ENSMUSG00000074656.13	ENSMUST00000166171.8	2312	10	-38	12960	11	0	5prime_fragment	FALSE	canonical	3	11792	junction_2	580.448868453449	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAAAGAAAAAGAA	3747	False	NA	-54	True	NA	NA	NA	154734740	154726297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_154726367_154729623_154729728_154730102_154730281_154734609
ES.20438.88	chr2	-	355	3	FSM	ENSMUSG00000074656.13	ENSMUST00000147136.2	3785	3	32	3398	-4	-3363	multi-exon	FALSE	canonical	3	11792	junction_1	580	3025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGACATTGATGAAG	3768	False	NA	NA	False	AAAAAG	-18	NA	154734719	154729660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154729728_154730102_154730281_154734609
ES.20438.9	chr2	-	3072	8	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	8	2	intron_retention	FALSE	canonical	3	11792	junction_6	877.543138075658	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCTCCATTGCTTTTG	3744	False	NA	-14	True	AATAAA	-26	NA	154734743	154713335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ES.20439.1	chr2	-	173	1	Intergenic	novelGene_16911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154750431	154750258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154750300_154750400
ES.2044.1	chr1	-	765	1	Antisense	novelGene_ENSMUSG00000058729.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTTTACAAGCGTGGT	NA	False	NA	NA	False	TTTAAA	-20	NA	180468834	180468069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180468100_180468800
ES.20440.1	chr2	+	157	1	Intergenic	novelGene_16912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	154768636	154768793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154768600_154768800
ES.20441.1	chr2	-	5807	2	Antisense	novelGene_ENSMUSG00000027596.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	154853430	154847324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_154848250_154848548
ES.20442.1	chr2	-	176	1	Intergenic	novelGene_16913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAAACA	2580	False	NA	NA	False	NA	NA	NA	154896571	154896395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_154896400_154896600
ES.20443.1	chr2	+	207	1	Intergenic	novelGene_16914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTTAAAAAAAAGAAAGC	7652	False	NA	NA	False	NA	NA	NA	154900674	154900881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154900700_154900900
ES.20444.1	chr2	-	2540	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	7	-4	7	4	multi-exon	FALSE	canonical	0	0	junction_6	366.363443645113	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGTACCCTCTGTTGA	NA	False	NA	-4	True	AATAAA	-34	NA	154916410	154901225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ES.20444.10	chr2	-	8860	2	NNC	ENSMUSG00000027597.16	novel	536	2	NA	NA	5726	-422	intron_retention	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTGGCTCTATTA	NA	False	NA	-62	True	GATAAA	-19	NA	154910641	154901651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_154908941_154909070
ES.20444.3	chr2	-	3919	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-12	intron_retention	FALSE	canonical	0	0	junction_6	385.362309229899	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGCTAAAAGCTGGTCT	NA	False	NA	-20	True	AATAAA	-18	NA	154916376	154901241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154910939_154916284
ES.20444.4	chr2	-	3626	8	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-382	intron_retention	FALSE	canonical	0	0	junction_5	397.606409836231	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGCATGTATGTGGC	NA	False	NA	-22	True	ATTAAA	-19	NA	154916376	154901611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154906847_154907456_154907607_154909242_154910939_154916284
ES.20444.5	chr2	-	3512	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-8	-418	intron_retention	FALSE	canonical	0	0	junction_6	385.362309229899	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGGCTCTATTAAAAT	NA	False	NA	-58	True	GATAAA	-23	NA	154916375	154901647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154910939_154916284
ES.20444.6	chr2	-	4199	7	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-8	-418	intron_retention	FALSE	canonical	3	939	junction_4	105.654573440476	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGGCTCTATTAAAAT	NA	False	NA	-58	True	GATAAA	-23	NA	154916375	154901647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154907607_154909242_154910939_154916284
ES.20444.7	chr2	-	4041	7	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-9	-419	intron_retention	FALSE	canonical	0	0	junction_4	429.458347482293	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTGGCTCTATTAAAA	NA	False	NA	-59	True	GATAAA	-22	NA	154916376	154901648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906847_154907456_154907607_154909242_154910939_154916284
ES.20444.8	chr2	-	2156	9	NIC	ENSMUSG00000027597.16	novel	2543	10	NA	NA	-8	-422	intron_retention	FALSE	canonical	0	0	junction_5	377.087854484867	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTGGCTCTATTA	NA	False	NA	-62	True	GATAAA	-19	NA	154916375	154901651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ES.20445.1	chr2	+	181	1	Intergenic	novelGene_16915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	154918976	154919157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154919000_154919200
ES.20446.1	chr2	+	157	1	Intergenic	novelGene_16916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAACAAATC	NA	False	NA	NA	False	NA	NA	NA	154926991	154927148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154927000_154927100
ES.20447.1	chr2	+	154	1	Intergenic	novelGene_16917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	154957917	154958071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_154957900_154958100
ES.20448.1	chr2	+	5354	27	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	-27	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	64.0446058498414	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTCGTCTGCTCT	NA	False	NA	59	True	AATAAA	-19	NA	154975401	155068777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154978950_154979019_154979070_154979169_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.11	chr2	+	3940	28	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	2	-1640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.4652013028559	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCATCTAAGATCATT	NA	False	NA	NA	False	ATTAAA	-12	NA	154975430	155067133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020096_155020208_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059645_155059758_155059910_155060008_155062127_155062201_155066286
ES.20448.12	chr2	+	5169	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	2	37298	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	43.0204788443829	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTGCATGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	154975430	155106073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286_155068766_155106051
ES.20448.13	chr2	+	3717	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-48	1640	2	-1640	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCATCTAAGATCATT	NA	False	NA	NA	False	ATTAAA	-12	NA	154975430	155067133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.15	chr2	+	5413	27	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	59.1654609983555	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975430	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155013068_155013124_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.16	chr2	+	3523	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	2	1634	2	-1632	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGATCATTCTTGATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	154975430	155067141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.17	chr2	+	5207	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	55.1470760784287	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975433	155068773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155013068_155013124_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.18	chr2	+	5402	27	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	66.6398516091176	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975434	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059645_155059758_155059910_155060008_155062127_155062201_155066286
ES.20448.19	chr2	+	5463	27	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	60.1064760366008	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975435	155068773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020096_155020208_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.2	chr2	+	5182	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	-21	-2	-21	2	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTCGTCTGCTCT	NA	False	NA	59	True	AATAAA	-19	NA	154975407	155068777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.23	chr2	+	5469	28	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.1853393454222	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTCGTCTGCTCT	NA	False	NA	59	True	AATAAA	-19	NA	154975442	155068777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154978950_154979019_154979070_154979169_154980115_154980193_154999739_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.24	chr2	+	5079	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	41.6433267963388	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975443	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.25	chr2	+	5332	27	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	66.1898828501454	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTTGCCTTTTCGTC	NA	False	NA	53	True	AATAAA	-13	NA	154975443	155068771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155013068_155013124_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.26	chr2	+	5057	24	NIC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	43.5250617677949	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCATTTGCCTTTT	NA	False	NA	49	True	AATAAA	-9	NA	154975445	155068767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154975506_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.27	chr2	+	6415	2	NNC	ENSMUSG00000027598.17	novel	1171	2	NA	NA	2	703	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAAAAAAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	154975445	154981912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154979019_154979070
ES.20448.28	chr2	+	5247	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	49.7061123001991	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975445	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022552_155024093_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.29	chr2	+	5109	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	42.6682738955096	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975445	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022597_155024075_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.30	chr2	+	4666	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-33	676	2	-676	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCTATTGAATCCAAT	NA	False	NA	NA	False	AATAAA	-29	NA	154975445	155068097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.31	chr2	+	4461	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	21	677	-1	-675	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCTATTGAATCCAATT	NA	False	NA	NA	False	AATAAA	-30	NA	154975449	155068098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.32	chr2	+	5292	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	44.9777545015311	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975451	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999739_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.33	chr2	+	3089	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-24	2244	4	-2244	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTCCAGTCATTCTGG	NA	False	NA	NA	False	AGTAAA	-16	NA	154975454	155066529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.34	chr2	+	8009	25	NIC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	5	0	intron_retention	FALSE	canonical	3	73	junction_2	35.8921755246027	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975455	155068773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.35	chr2	+	5265	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_18	48.6374341428493	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTTGCCTTTTCGTC	NA	False	NA	53	True	AATAAA	-13	NA	154975455	155068771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.36	chr2	+	5178	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	63.8959654438369	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975455	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059645_155059758_155059910_155060008_155062127_155062201_155066286
ES.20448.39	chr2	+	5185	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.9075536085636	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATTTGCCTTTTCGTC	NA	False	NA	53	True	AATAAA	-13	NA	154975456	155068771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020903_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.40	chr2	+	5349	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	50.4308794291751	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975456	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050961_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.43	chr2	+	5780	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	8	1	intron_retention	FALSE	non_canonical	0	0	junction_6	66.4585815042388	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975458	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020096_155020208_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034044_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.48	chr2	+	5117	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	13	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	42.9814034399375	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAGAGTAAAAT	NA	False	NA	34	True	NA	NA	NA	154975463	155068752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980209_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.49	chr2	+	5287	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.8608714193718	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975468	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027181_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.5	chr2	+	4612	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	-15	562	-15	-560	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTCATGATTCATTT	NA	False	NA	NA	False	ATTAAA	-42	NA	154975413	155068213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.50	chr2	+	4914	23	NIC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	44.561430344864	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975468	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.52	chr2	+	5196	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	64.106960620513	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975470	155068773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059645_155059792_155059910_155060008_155062127_155062201_155066286
ES.20448.53	chr2	+	5765	25	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.8813900063443	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975473	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154976158_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.54	chr2	+	6991	25	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	1	-6	intron_retention	FALSE	canonical	3	13	junction_18	49.6017297805452	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCATTTGCCTTTT	NA	False	NA	49	True	AATAAA	-9	NA	154975481	155068767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.55	chr2	+	4966	24	NIC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	43.8361358389743	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTCGTCTGCTCT	NA	False	NA	59	True	AATAAA	-19	NA	154975481	155068777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_154975506_154980115_154980193_155005312_155005404_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.56	chr2	+	5950	26	NNC	ENSMUSG00000027598.17	novel	5309	26	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4202181669219	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTCGTCTGC	NA	False	NA	56	True	AATAAA	-16	NA	154975490	155068774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154976158_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.58	chr2	+	4892	22	ISM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	35124	21	35122	-21	3prime_fragment	FALSE	canonical	3	134	junction_5	19.8577709161838	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAGAGTAAAAT	NA	False	NA	34	True	NA	NA	NA	155010602	155068752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.59	chr2	+	177	1	ISM	ENSMUSG00000027598.17	ENSMUST00000138468.8	3711	6	43425	22	43388	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAATAATAAT	5309	False	NA	NA	False	NA	NA	NA	155018868	155019045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155018900_155019000
ES.20448.60	chr2	+	3840	14	ISM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	55877	-3	55875	1	3prime_fragment	FALSE	canonical	3	176	junction_11	12.8214871424644	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTCGTCTGCTC	NA	False	NA	58	True	AATAAA	-18	NA	155031355	155068776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.61	chr2	+	3195	6	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	76952	-21	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	77.854736529	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAGAGTAAAAT	4781	False	NA	34	True	NA	NA	NA	155052432	155068752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155052501_155054256_155054378_155054917_155055023_155059645_155060008_155062127_155062201_155066286
ES.20448.62	chr2	+	701	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	-17	0	-15	0	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTCTTTACTAGA	NA	False	NA	19	True	AGTAAA	-21	NA	155078437	155092197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ES.20448.63	chr2	+	623	4	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	753.592433318936	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078467	155092193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155078538_155084650_155084727_155089734_155089859_155091840
ES.20448.64	chr2	+	739	4	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	814.119292378102	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTTGTGTCTTTAC	NA	False	NA	15	True	AGTAAA	-17	NA	155078478	155092193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155078538_155084567_155084727_155089690_155089859_155091840
ES.20448.66	chr2	+	728	4	FSM	ENSMUSG00000047459.15	ENSMUST00000135831.2	534	4	-4	-190	-4	-2	multi-exon	FALSE	canonical	3	40	junction_1	796.677405785359	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTACTGTGTTGTGTCTT	NA	False	NA	12	True	AGTAAA	-14	NA	155078726	155092190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155078861_155084650_155084727_155089690_155089859_155091840
ES.20448.7	chr2	+	5374	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	-62	-3	-12	1	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTCGTCTGCTC	NA	False	NA	58	True	AATAAA	-18	NA	154975416	155068776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.8	chr2	+	5642	24	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	-7	1	intron_retention	FALSE	canonical	3	13	junction_17	42.5304516725452	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTCGTCTGCTC	NA	False	NA	58	True	AATAAA	-18	NA	154975421	155068776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155051043_155051139_155051906_155052041_155052359_155052501_155054256_155055023_155059910_155060008_155062127_155062201_155066286
ES.20448.9	chr2	+	5046	26	NNC	ENSMUSG00000027598.17	novel	5159	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55.7429242146481	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975424	155068775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_154975506_154980115_154980195_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286_155067348_155067466
ES.20449.1	chr2	-	3269	1	Antisense	novelGene_ENSMUSG00000047459.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTTATGGTG	NA	False	NA	NA	False	NA	NA	NA	155092002	155088733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_155088700_155092000
ES.2045.1	chr1	-	2682	2	FSM	ENSMUSG00000026497.8	ENSMUST00000027778.8	2294	2	-399	11	-399	-11	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATTTTTAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	180524998	180520618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180522487_180524184
ES.20450.1	chr2	-	1497	1	Intergenic	novelGene_16918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155095153	155093656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155093700_155095200
ES.20451.1	chr2	-	190	1	Intergenic	novelGene_16919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACTCTAGGTGCGAGT	NA	False	NA	NA	False	AATAAA	-22	NA	155116063	155115873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155115900_155116100
ES.20452.1	chr2	+	1096	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	26	-10	26	10	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTTTGGGAGCAG	NA	False	NA	21	True	AATAAA	-33	NA	155118242	155120003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
ES.20452.2	chr2	+	1307	2	ISM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	156	3	-90	0	intron_retention	FALSE	canonical	3	435	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGCCTCCAGCTGCT	NA	False	NA	8	True	AATAAA	-20	NA	155118372	155119990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155118567_155118877
ES.20452.3	chr2	+	812	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	15	-1	15	1	multi-exon	FALSE	canonical	3	438	junction_2	23	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTGCCTCCAGCTGC	NA	False	NA	7	True	AATAAA	-19	NA	155118823	155119989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155118934_155119017_155119125_155119394
ES.20453.1	chr2	+	173	1	Intergenic	novelGene_16920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTGGCG	1465	False	NA	NA	False	NA	NA	NA	155134991	155135164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155135000_155135200
ES.20454.1	chr2	+	1494	1	Intergenic	novelGene_16921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	155153187	155154681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155153200_155154700
ES.20454.2	chr2	+	1346	2	Antisense	novelGene_ENSMUSG00000038383.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	155153187	155154681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155153242_155153389
ES.20455.1	chr2	+	3477	1	Intergenic	novelGene_16922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGAAATCTCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	155166339	155169816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155166300_155169800
ES.20456.1	chr2	+	173	1	Intergenic	novelGene_16923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155186177	155186350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155186200_155186400
ES.20457.1	chr2	-	1621	11	NNC	ENSMUSG00000038383.17	novel	1636	12	NA	NA	19	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	59.2291313459855	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTAAGGAGTGGGTTTC	NA	False	NA	67	True	NA	NA	NA	155199320	155120095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155187559_155187633_155199185
ES.20457.2	chr2	-	1706	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	-73	3	-73	-2	multi-exon	FALSE	canonical	3	155	junction_4	21.4987987363815	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTGTTCTGATGACA	NA	False	NA	-3	True	AATAAA	-20	NA	155199423	155120165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ES.20457.3	chr2	-	1705	13	NNC	ENSMUSG00000038383.17	novel	1636	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.4502546453747	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTGTTCTGATGACA	NA	False	NA	-3	True	AATAAA	-20	NA	155199351	155120165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155145179_155145251_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ES.20457.4	chr2	-	3077	4	FSM	ENSMUSG00000038383.17	ENSMUST00000124419.2	3057	4	7	-27	7	27	multi-exon	FALSE	canonical	3	168	junction_1	9.8770215933527	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAGAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	155199332	155174538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155177344_155178601_155178662_155187567_155187633_155199185
ES.20457.5	chr2	-	1926	4	FSM	ENSMUSG00000038383.17	ENSMUST00000124419.2	3057	4	13	1118	13	-1118	multi-exon	FALSE	canonical	3	168	junction_1	9.8770215933527	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCAGAGTTCAGATTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	155199326	155175683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155177344_155178601_155178662_155187567_155187633_155199185
ES.20457.6	chr2	-	185	1	Intergenic	novelGene_16924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGCAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	155197079	155196894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155196900_155197100
ES.20458.1	chr2	+	214	1	Intergenic	novelGene_16925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCACAAATTAGATTTTT	8352	False	NA	NA	False	AATAAA	-13	NA	155207969	155208183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155208000_155208200
ES.20459.1	chr2	+	176	1	Intergenic	novelGene_16926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGACGACCA	8898	False	NA	NA	False	NA	NA	NA	155208515	155208691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155208500_155208700
ES.2046.1	chr1	+	202	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTAACTTTTGTGT	3005	False	NA	NA	False	NA	NA	NA	180544595	180544797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180544600_180544800
ES.20460.1	chr2	+	172	1	Intergenic	novelGene_16929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTAGGGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	155212339	155212511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155212300_155212500
ES.20461.1	chr2	+	3869	4	NNC	ENSMUSG00000038375.16	novel	486	3	NA	NA	255	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.7376429798725	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTCTGCCTCAGCTG	3541	False	NA	7	True	AATAAA	-19	NA	155223233	155231768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155223330_155227209_155227385_155227800_155228090_155228459
ES.20461.10	chr2	+	4509	4	NIC	ENSMUSG00000038375.16	novel	991	3	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	39.8106630048896	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCTTTCTGCCTCAGC	4419	False	NA	5	True	AATAAA	-17	NA	155224111	155231766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155224850_155227209_155227385_155227800_155228090_155228459
ES.20461.11	chr2	+	4378	4	NIC	ENSMUSG00000038375.16	novel	991	3	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	40.8357142163028	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATTATGCTTTCTGCCT	4426	False	NA	1	True	AATAAA	-13	NA	155224118	155231762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155224850_155227209_155227385_155227920_155228090_155228459
ES.20461.12	chr2	+	4689	4	NNC	ENSMUSG00000038375.16	novel	991	3	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	40.2740611312045	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTTCTGCCTCAGCT	4438	False	NA	6	True	AATAAA	-18	NA	155224130	155231767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155225048_155227209_155227385_155227800_155228090_155228459
ES.20461.13	chr2	+	3997	4	NNC	ENSMUSG00000038375.16	novel	991	3	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.7376429798725	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATGCTTTCTGCCTCAG	4438	False	NA	4	True	AATAAA	-16	NA	155224130	155231765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155224358_155227209_155227385_155227800_155228090_155228459
ES.20461.14	chr2	+	4546	5	NNC	ENSMUSG00000038375.16	novel	991	3	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.7280645477887	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATGCTTTCTGCCTCAG	4450	False	NA	4	True	AATAAA	-16	NA	155224142	155231765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155224850_155224978_155225048_155227209_155227385_155227800_155228090_155228459
ES.20461.15	chr2	+	3034	3	ISM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	3623	594	3235	-594	3prime_fragment	FALSE	canonical	3	76	junction_1	9	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACGGATGTCAGAGG	7664	False	NA	NA	False	ATTAAA	-24	NA	155227356	155231176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155227385_155227800_155228090_155228459
ES.20461.16	chr2	+	3269	1	NIC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	4337	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATATAAACAAAT	8766	False	NA	-34	True	NA	NA	NA	155228458	155231727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155228500_155231700
ES.20461.2	chr2	+	3865	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	-33	-3092	-7	-1	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCTGCCTCAGCTGA	4034	False	NA	8	True	AATAAA	-20	NA	155223726	155231769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
ES.20461.3	chr2	+	3984	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	-6	1	-6	-1	multi-exon	FALSE	canonical	3	61	junction_1	13.490737563232	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCTGCCTCAGCTGA	4035	False	NA	8	True	AATAAA	-20	NA	155223727	155231769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
ES.20461.4	chr2	+	3261	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	-18	-2503	8	-590	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGGATGTCAGAGGGACC	4049	False	NA	NA	False	ATTAAA	-28	NA	155223741	155231180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
ES.20461.5	chr2	+	3730	4	NNC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.9386982604994	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATGCTTTCTGCCTCAG	4071	False	NA	4	True	AATAAA	-16	NA	155223763	155231765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155223938_155227209_155227385_155228014_155228090_155228459
ES.20461.7	chr2	+	2309	1	NIC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	5	-1803	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTAGAACTGTAGTGAT	4072	False	NA	NA	False	NA	NA	NA	155223764	155226073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155223800_155226100
ES.20461.9	chr2	+	3665	4	NNC	ENSMUSG00000038375.16	novel	3979	4	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	32.8667342798493	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATGCTTTCTGCCTCA	4087	False	NA	3	True	AATAAA	-15	NA	155223779	155231764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155223938_155227209_155227385_155227800_155228041_155228672
ES.20462.1	chr2	+	6442	1	Intergenic	novelGene_16931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGAAATGTTTACTCC	NA	False	NA	NA	False	NA	NA	NA	155268055	155274497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155268100_155274500
ES.20463.1	chr2	-	189	1	Intergenic	novelGene_16927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTAAAGGAGATT	NA	False	NA	NA	False	NA	NA	NA	155210811	155210622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155210600_155210800
ES.20463.10	chr2	-	6952	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	54.3685927494084	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315679	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260912_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.11	chr2	-	8302	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	55.2765311679304	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315664	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155262277_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.12	chr2	-	4080	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_7	41.7575419258882	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315786	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260909_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.13	chr2	-	3700	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.2107810347503	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315803	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155263319_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.14	chr2	-	4044	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.3015969798833	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315723	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280061_155282607_155282696_155315559
ES.20463.15	chr2	-	3386	10	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	51.6686976900682	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315715	155232586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155315559
ES.20463.16	chr2	-	7298	17	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.0493929409506	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315755	155232586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155242952_155243082_155244591_155244661_155246323_155246434_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.19	chr2	-	3756	7	NIC	ENSMUSG00000038369.15	novel	6872	14	NA	NA	-1679	-2	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	18.6904610251682	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155262502	155232586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797
ES.20463.2	chr2	-	190	2	Intergenic	novelGene_16928	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTAAAGGAGATT	NA	False	NA	NA	False	NA	NA	NA	155234767	155210622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155210745_155234699
ES.20463.22	chr2	-	4078	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	60.2334319670614	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAGGTATGTTATTG	NA	False	NA	-21	True	AATAAA	-15	NA	155315714	155232586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260912_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155291202_155291272_155315559
ES.20463.24	chr2	-	3916	13	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_7	55.9217583374804	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAAGGTATGTTATT	NA	False	NA	-22	True	AATAAA	-14	NA	155315723	155232587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260909_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155315559
ES.20463.25	chr2	-	4017	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.3281137806273	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAAGGTATGTTATT	NA	False	NA	-22	True	AATAAA	-14	NA	155315722	155232587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282674_155315559
ES.20463.27	chr2	-	3704	12	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	46.3219063539538	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTAAAGGTATGTTAT	NA	False	NA	-23	True	AATAAA	-13	NA	155315756	155232588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155315559
ES.20463.28	chr2	-	4003	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.1696597812496	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACTTAAAGGTATGTTA	NA	False	NA	-24	True	AATAAA	-12	NA	155315668	155232589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260909_155262230_155262277_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.3	chr2	-	3963	13	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	42.8027614633552	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTATTGGAAAGAATGA	NA	False	NA	-11	True	AATAAA	-25	NA	155315723	155232576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155315559
ES.20463.31	chr2	-	5123	5	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	30964	45	-6258	-32	3prime_fragment	FALSE	canonical	3	35	junction_4	56.3044181214938	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAACGTGTTAAATAAA	NA	False	NA	-3	True	AATAAA	-30	NA	155251739	155232620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394
ES.20463.32	chr2	-	4093	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-12	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.1696597812496	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGAACGTGTTAAAT	NA	False	NA	-6	True	AATAAA	-27	NA	155315756	155232623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262230_155262277_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.33	chr2	-	6635	13	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-1	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.3657270149452	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGAACGTGTTAAAT	NA	False	NA	-6	True	AATAAA	-27	NA	155315745	155232623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260796_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155315559
ES.20463.35	chr2	-	3880	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	68	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	64.0232945772139	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACTGAACGTGTTAA	NA	False	NA	-8	True	AATAAA	-25	NA	155315658	155232625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260909_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276010_155279779_155280060_155282607_155282674_155315559
ES.20463.36	chr2	-	3722	15	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-11	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.8562286589585	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATACTGAACGTGTTA	NA	False	NA	-9	True	AATAAA	-24	NA	155315755	155232626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263020_155263340_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.38	chr2	-	178	1	Intergenic	novelGene_16930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGAAAGAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	155234769	155234591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155234600_155234800
ES.20463.39	chr2	-	2997	1	NIC	ENSMUSG00000038369.15	novel	6872	14	NA	NA	-2209	4059	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGACCTATTTGTTTG	2364	False	NA	NA	False	AATAAA	-6	NA	155247690	155244693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155244700_155247700
ES.20463.40	chr2	-	316	1	Intergenic	novelGene_16932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGTTTGAAATTAT	NA	False	NA	NA	False	AATAAA	-31	NA	155283666	155283350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155283400_155283700
ES.20463.41	chr2	-	177	1	Intergenic	novelGene_16933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAAACGCCTGA	NA	False	NA	NA	False	NA	NA	NA	155283667	155283490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155283500_155283700
ES.20463.5	chr2	-	4146	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTATGTTATTGGAAAG	NA	False	NA	-16	True	AATAAA	-20	NA	155315813	155232581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.6	chr2	-	5914	12	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_1	44.4486889616918	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315794	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.7	chr2	-	7119	15	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	44.4323034720994	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315813	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.8	chr2	-	3975	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.2107810347503	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315750	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262991_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
ES.20463.9	chr2	-	4225	15	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	51.9731582999674	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315826	155232584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155291202_155291272_155315559
ES.20464.1	chr2	+	2826	19	NNC	ENSMUSG00000027605.19	novel	879	9	NA	NA	-44019	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.420215324213	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAACTGCTTTTTT	NA	False	NA	9	True	AATAAA	-13	NA	155315848	155404656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155315987_155352595_155352701_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397911_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ES.20464.10	chr2	+	155	1	Intergenic	novelGene_16935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	155381423	155381578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155381400_155381600
ES.20464.2	chr2	+	2819	2	Intergenic	novelGene_16934	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCTTAATTATG	NA	False	NA	NA	False	NA	NA	NA	155315867	155321904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155315987_155319204
ES.20464.4	chr2	+	2845	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	86	0	1	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2093	False	NA	19	True	AATAAA	-23	NA	155359953	155404666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ES.20464.7	chr2	+	2944	17	ISM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	109	10	0	-10	intron_retention	FALSE	canonical	2	49	junction_8	8.08451451851006	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAACTGCTTTTTT	2116	False	NA	9	True	AATAAA	-13	NA	155359976	155404656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665
ES.20464.8	chr2	+	2848	19	FSM	ENSMUSG00000027605.19	ENSMUST00000103142.12	2145	19	-39	-664	-1	-2	multi-exon	FALSE	canonical	1	2	junction_7	21.9854750030813	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTTTTTTAGGTATC	2127	False	NA	17	True	AATAAA	-21	NA	155359987	155404664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155393109_155393149_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ES.20464.9	chr2	+	4074	12	NIC	ENSMUSG00000027605.19	novel	2931	18	NA	NA	1	-10	intron_retention	FALSE	canonical	2	49	junction_4	8.49987846291331	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAACTGCTTTTTT	2129	False	NA	9	True	AATAAA	-13	NA	155359989	155404656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155360205_155363900_155364097_155391110_155392390_155397773_155397912_155398252_155398832_155399016_155399150_155399229_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ES.20465.1	chr2	-	2378	14	NNC	ENSMUSG00000027603.16	novel	2614	15	NA	NA	443	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.08324889839001	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACTCTGGCTTGAT	9044	False	NA	NA	False	ATTAAA	-16	NA	155348431	155332306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345442_155346623_155346742_155347874_155348027_155348245
ES.20465.3	chr2	-	2336	13	NNC	ENSMUSG00000027603.16	novel	2614	15	NA	NA	410	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.01156293229048	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACTCTGGCTTGAT	9011	False	NA	NA	False	ATTAAA	-16	NA	155348464	155332306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345157_155346623_155346742_155347874_155348027_155348245
ES.20465.4	chr2	-	2436	15	NNC	ENSMUSG00000027603.16	novel	2614	15	NA	NA	-913	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.90053612230382	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACTCTGGCTTGAT	7688	False	NA	NA	False	ATTAAA	-16	NA	155349787	155332306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155349737
ES.20465.5	chr2	-	2807	7	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	14352	9	-1337	-9	3prime_fragment	FALSE	canonical	3	12	junction_1	4.56131072780134	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTGACTCTGGCTTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	155342416	155332307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933
ES.20465.6	chr2	-	2395	14	NNC	ENSMUSG00000027603.16	novel	2614	15	NA	NA	346	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.10945527743532	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCCTGACTCTGGCTTG	8947	False	NA	NA	False	ATTAAA	-14	NA	155348528	155332308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341026_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
ES.20465.7	chr2	-	2672	13	ISM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	8261	2240	367	-2240	internal_fragment	FALSE	canonical	2	7	junction_9	4.88762609953839	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGCCTTCTATAAAC	8968	False	NA	NA	False	TATAAA	-15	NA	155348507	155334538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245
ES.20466.1	chr2	+	2210	3	NNC	ENSMUSG00000085317.2	novel	674	2	NA	NA	-1357	1625	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	155431693	155436396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155431759_155433968_155434089_155434371
ES.20466.2	chr2	+	6012	3	NNC	ENSMUSG00000085317.2	novel	727	3	NA	NA	-35	5263	intron_retention	FALSE	non_canonical	0	0	junction_1	4	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATCCTGAGCATTT	NA	False	NA	NA	False	AATAAA	-44	NA	155433015	155440034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155433246_155433969_155434089_155434371
ES.20466.3	chr2	+	5964	3	NNC	ENSMUSG00000085317.2	novel	727	3	NA	NA	-5	5257	intron_retention	FALSE	non_canonical	0	0	junction_1	4	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTGTATCCTGA	NA	False	NA	NA	False	AATAAA	-38	NA	155433045	155440028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155433246_155433981_155434089_155434371
ES.20467.1	chr2	+	6664	38	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	-72	3	intron_retention	FALSE	non_canonical	0	0	junction_6	21.3699200816266	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155453059	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155453182_155453506_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459549_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.11	chr2	+	5786	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2452	-3	intron_retention	FALSE	canonical	3	15	junction_1	17.3626387536514	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTAGCCACTGTCCTTA	NA	False	NA	8	True	AATAAA	-13	NA	155455583	155476120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.12	chr2	+	5991	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2452	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.2121560158018	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155455583	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455610_155455958_155456116_155456387_155456416_155459443_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468465_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.13	chr2	+	5631	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2452	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.9030748100773	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAATCGGTTTATTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	155455583	155476229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455610_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.15	chr2	+	5719	37	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2453	3	intron_retention	FALSE	canonical	3	15	junction_1	16.7785825781957	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155455584	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.16	chr2	+	5674	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2453	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.9925003867506	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTAATCGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	155455584	155476227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.17	chr2	+	5842	37	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2453	1	intron_retention	FALSE	canonical	1	1	junction_1	17.6385826745074	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155455584	155476124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455781_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.18	chr2	+	5665	37	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2461	3	intron_retention	FALSE	canonical	3	15	junction_1	17.1283057546475	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155455592	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.19	chr2	+	5748	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2468	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	18.0086822660984	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155455599	155476124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475561_155475782_155475921_155475999
ES.20467.2	chr2	+	6390	40	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	-13	1	intron_retention	FALSE	canonical	1	2	junction_1	19.8547983558504	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155453118	155476124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155453182_155453506_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.20	chr2	+	6193	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2468	2	intron_retention	FALSE	canonical	3	15	junction_1	16.8383915078439	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAATCGGTTTATTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	155455599	155476229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.21	chr2	+	5590	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2480	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	18.0086822660984	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTAGCCACTGTCCTTA	NA	False	NA	8	True	AATAAA	-13	NA	155455611	155476120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475732_155475921_155475999
ES.20467.22	chr2	+	5740	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2485	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9030748100773	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCACTGTCCTTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	155455616	155476124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455857_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.23	chr2	+	6296	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2490	2	intron_retention	FALSE	canonical	0	0	junction_1	17.2998525415445	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155455621	155476125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455857_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155475190_155475272_155475921_155475999
ES.20467.24	chr2	+	5654	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2494	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.8334966052296	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155455625	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455781_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.26	chr2	+	5735	37	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2513	0	intron_retention	FALSE	canonical	1	1	junction_1	17.9920035392956	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155455644	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455781_155455958_155456116_155456387_155456416_155459443_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.27	chr2	+	5381	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	3140	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.0440730276889	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155456271	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155456339_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.28	chr2	+	5458	36	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	3144	4	combination_of_known_splicesites	FALSE	canonical	3	22	junction_11	16.4493036885071	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCCTTATTTCTTG	NA	False	NA	15	True	AATAAA	-20	NA	155456275	155476127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.29	chr2	+	5311	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	3147	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	20.827376018998	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155456278	155476125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155456339_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460693_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464569_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.3	chr2	+	6323	40	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_22	20.9574880427607	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155453162	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155453182_155453506_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468278_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.30	chr2	+	5461	36	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	5956	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.1897032994617	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155459087	155476125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155459233_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.31	chr2	+	5622	35	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	6006	102	6006	2	3prime_fragment	FALSE	canonical	3	22	junction_10	16.5320282626636	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155459137	155476125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.32	chr2	+	5224	32	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	7369	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.0263998793953	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCCACTGTCCTTAT	NA	False	NA	9	True	AATAAA	-14	NA	155460500	155476121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155460693_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.33	chr2	+	5288	32	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	7371	100	7371	4	3prime_fragment	FALSE	canonical	3	22	junction_7	15.8722134313131	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCCTTATTTCTTG	NA	False	NA	15	True	AATAAA	-20	NA	155460502	155476127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.34	chr2	+	5204	32	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	7385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	19.5075160946529	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155460516	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155460693_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155476005
ES.20467.35	chr2	+	5307	32	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	7390	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.0263998793953	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATTTAATCGGTTTAT	NA	False	NA	113	True	AATAAA	-13	NA	155460521	155476225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155460693_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.36	chr2	+	5649	30	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	7403	0	intron_retention	FALSE	canonical	3	22	junction_7	15.6042769831373	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155460534	155476123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782
ES.20467.38	chr2	+	5063	31	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	8852	101	8852	3	3prime_fragment	FALSE	canonical	3	22	junction_6	16.1020702602698	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155461983	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.39	chr2	+	4306	24	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	-6823	-3	intron_retention	FALSE	canonical	0	0	junction_11	20.5634248690252	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTAGCCACTGTCCTTA	NA	False	NA	8	True	AATAAA	-13	NA	155464156	155476120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.4	chr2	+	6023	40	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	372	4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	19.3256122785496	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCGGTTTATTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	155453503	155476231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.40	chr2	+	4040	24	Fusion	ENSMUSG00000076312.3_ENSMUSG00000074652.4	novel	667	3	NA	NA	12	-5	multi-exon	FALSE	canonical	0	0	junction_1	18.7917650789544	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTAGCCACTGTCCT	NA	False	NA	6	True	AATAAA	-11	NA	155464811	155476118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_155464896_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.42	chr2	+	3751	19	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	14872	100	-2976	4	3prime_fragment	FALSE	canonical	3	38	junction_2	13.4215829501922	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTCCTTATTTCTTG	NA	False	NA	15	True	AATAAA	-20	NA	155468003	155476127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.43	chr2	+	4108	17	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	-2602	3	intron_retention	FALSE	canonical	3	38	junction_2	13.6426204869153	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155468377	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.44	chr2	+	2762	15	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	-344	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.7044488916196	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTAGCCACTGTCCTTA	NA	False	NA	8	True	AATAAA	-13	NA	155470635	155476120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155470820_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20467.45	chr2	+	3536	10	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	301	0	intron_retention	FALSE	canonical	3	44	junction_5	11.9256958799989	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTAATCGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	155471280	155476227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272
ES.20467.46	chr2	+	2843	13	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	483	0	intron_retention	FALSE	non_canonical	0	0	junction_12	20.5101600838869	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTAATCGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	155471462	155476227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475917_155475999
ES.20467.5	chr2	+	6515	38	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	372	3	intron_retention	FALSE	canonical	2	4	junction_1	18.6402644686029	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCGGTTTATTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	155453503	155476230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272
ES.20467.6	chr2	+	6080	39	NNC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	372	4	intron_retention	FALSE	canonical	0	0	junction_21	20.2803071654687	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCGGTTTATTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	155453503	155476231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468278_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782
ES.20467.7	chr2	+	6331	39	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	372	2	intron_retention	FALSE	canonical	2	4	junction_1	18.9701069698817	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCACTGTCCTTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	155453503	155476125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475921_155475999
ES.20467.8	chr2	+	6406	38	NIC	ENSMUSG00000074652.4	novel	6163	42	NA	NA	372	-2	intron_retention	FALSE	canonical	2	4	junction_1	18.6402644686029	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGCCACTGTCCTTAT	NA	False	NA	9	True	AATAAA	-14	NA	155453503	155476121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272
ES.20467.9	chr2	+	5596	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2434	3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	17.4418788568484	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCCTTATTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	155455565	155476126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155455660_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ES.20468.1	chr2	+	4695	8	Antisense	novelGene_ENSMUSG00000038324.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGAAAAAATGCTACCCA	NA	False	NA	NA	False	NA	NA	NA	155477249	155493773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155477357_155478107_155478231_155479579_155479687_155479967_155481482_155482391_155483610_155485310_155485372_155486849_155486982_155492340
ES.20468.2	chr2	+	179	2	Antisense	novelGene_ENSMUSG00000088695.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	155486470	155511337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155486492_155511179
ES.20468.3	chr2	+	173	1	Antisense	novelGene_ENSMUSG00000038324.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	155486474	155486647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155486500_155486600
ES.20468.4	chr2	+	160	1	Intergenic	novelGene_16937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	155489632	155489792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155489600_155489800
ES.20468.5	chr2	+	179	1	Intergenic	novelGene_16938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	155511159	155511338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155511200_155511300
ES.20469.1	chr2	+	10915	2	Antisense	novelGene_ENSMUSG00000038324.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTATTTGCTCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	155516348	155527298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155523501_155523535
ES.2047.1	chr1	+	3304	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-42	209	-42	-209	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGGGAGCAGTGAAT	NA	False	NA	NA	False	GATAAA	-17	NA	180553565	180581560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.10	chr1	+	3132	8	NNC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	30	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.1063730663672	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAGCACTAATATA	NA	False	NA	NA	False	AATAAA	-6	NA	180553637	180581472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574370_180574644_180579723
ES.2047.11	chr1	+	1908	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	30	1533	30	-1533	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCTGGAGGGCGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	180553637	180580236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.12	chr1	+	3294	8	NNC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.8513428497613	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATTGTCTTTCTTCAT	NA	False	NA	19	True	AATACA	-13	NA	180553637	180581768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180553944_180560730_180560838_180562052_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.13	chr1	+	3196	8	NNC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	39	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.8513428497613	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTTAATACAGTTT	NA	False	NA	-9	True	ATTAAA	-23	NA	180553646	180581740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180553944_180560730_180560777_180562052_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.15	chr1	+	158	1	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	180579117	180579275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180579100_180579300
ES.2047.16	chr1	+	1769	1	NIC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	22300	-279	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTCTTTCAGCCTTTG	421	False	NA	NA	False	AATAAA	-24	NA	180579721	180581490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180579700_180581500
ES.2047.2	chr1	+	3518	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-42	-5	-42	5	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTCTTCATTGAGCT	NA	False	NA	25	True	AATACA	-19	NA	180553565	180581774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.3	chr1	+	5380	7	NIC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	-32	-297	intron_retention	FALSE	canonical	3	166	junction_5	15.3776533392525	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAGCACTAATATA	NA	False	NA	NA	False	AATAAA	-6	NA	180553575	180581472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180553944_180560730_180560873_180561941_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.5	chr1	+	5365	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	-12	-1882	-12	1882	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGAGTGTTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	180553595	180583651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.6	chr1	+	2988	8	NNC	ENSMUSG00000026499.6	novel	3471	8	NA	NA	-8	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.8513428497613	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATATATTTCTTTCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	180553599	180581485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180553944_180560730_180560777_180562052_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.2047.8	chr1	+	1696	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	2	1773	2	-1773	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTGGCGCATAGGAG	NA	False	NA	NA	False	NA	NA	NA	180553609	180579996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ES.20470.1	chr2	-	2021	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	-56	-2	-56	2	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGTTTCATGTACCA	8294	False	NA	0	True	AATAAA	-21	NA	155434786	155405098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.10	chr2	-	1919	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-20759	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	292.674295173928	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	NA	False	NA	-8	True	AATAAA	-13	NA	155455489	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155455410
ES.20470.11	chr2	-	2668	12	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	1	2	intron_retention	FALSE	canonical	3	779	junction_11	113.86224822235	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8447	False	NA	-8	True	AATAAA	-13	NA	155434633	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.12	chr2	-	1850	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_11	282.365257935336	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8429	False	NA	-8	True	AATAAA	-13	NA	155434651	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429389_155429497_155434613
ES.20470.13	chr2	-	1770	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	290.295347687297	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8447	False	NA	-8	True	AATAAA	-13	NA	155434633	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.15	chr2	-	2296	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	388.643894058415	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8544	False	NA	-8	True	AATAAA	-13	NA	155434536	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419425_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434096
ES.20470.16	chr2	-	2335	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-34	2	intron_retention	FALSE	canonical	0	0	junction_12	384.289920575021	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8559	False	NA	-8	True	AATAAA	-13	NA	155434521	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155433936
ES.20470.17	chr2	-	1736	12	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	304.628075631269	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8431	False	NA	-8	True	AATAAA	-13	NA	155434649	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.18	chr2	-	1087	6	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	382.523933891724	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8445	False	NA	-8	True	AATAAA	-13	NA	155434635	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409825_155429448_155429497_155434613
ES.20470.19	chr2	-	6227	12	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-7	2	intron_retention	FALSE	canonical	3	779	junction_11	112.062482571109	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	8426	False	NA	-8	True	AATAAA	-13	NA	155434654	155405106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.2	chr2	-	2665	12	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	288.563240558552	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCATTGTTTCATGT	8432	False	NA	-4	True	AATAAA	-17	NA	155434648	155405102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423829_155423954_155429361_155429497_155434613
ES.20470.20	chr2	-	7251	10	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	6	1	intron_retention	FALSE	canonical	2	3	junction_8	329.106872206178	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAATGACTCATTGTTT	8452	False	NA	-9	True	AATAAA	-12	NA	155434628	155405107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155409808_155413438_155413506_155414843_155414922_155415014_155419559_155420208_155420708_155423807_155423914_155429361_155429497_155434613
ES.20470.21	chr2	-	1911	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	292.78514116821	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8388	False	NA	-10	True	AATAAA	-11	NA	155434692	155405108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408728_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.22	chr2	-	1831	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	291.088283668184	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8434	False	NA	-10	True	AATAAA	-11	NA	155434646	155405108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423914_155429361_155429497_155434613
ES.20470.23	chr2	-	1936	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-587	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	292.674295173928	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	7763	False	NA	-10	True	AATAAA	-11	NA	155435317	155405108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155435219
ES.20470.25	chr2	-	2093	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-354	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	292.674295173928	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	NA	False	NA	-10	True	AATAAA	-11	NA	155429850	155405108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155429595
ES.20470.27	chr2	-	3175	1	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	5590	-29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAGAAAAATAGA	5656	False	NA	NA	False	NA	NA	NA	155409334	155406159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155406200_155409300
ES.20470.28	chr2	-	2866	1	Genic_Genomic	ENSMUSG00000027610.18	novel	NA	NA	NA	NA	-3051	-1604	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAAAGATAAGAG	NA	False	NA	NA	False	NA	NA	NA	155419354	155416488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_155416500_155419400
ES.20470.3	chr2	-	2235	13	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	383.36828644993	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCATTGTTTCATGT	8553	False	NA	-4	True	AATAAA	-17	NA	155434527	155405102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423914_155429361_155429497_155434096
ES.20470.4	chr2	-	1731	14	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	283.873982375671	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTCATTGTTTCATGT	8424	False	NA	-4	True	AATAAA	-17	NA	155434656	155405102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405407_155405562_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.5	chr2	-	7030	11	NNC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	28	junction_5	314.733538092145	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGACTCATTGTTTCATG	8430	False	NA	-5	True	AATAAA	-16	NA	155434650	155405103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155405640_155406679_155406870_155408722_155409808_155413438_155413506_155414843_155414918_155415014_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ES.20470.6	chr2	-	2488	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	52	-4	intron_retention	FALSE	canonical	0	0	junction_12	292.674295173928	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGACTCATTGTTTCAT	8498	False	NA	-6	True	AATAAA	-15	NA	155434582	155405104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155433936
ES.20470.7	chr2	-	4388	1	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	5432	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGACTCATTGTTTCAT	5498	False	NA	-6	True	AATAAA	-15	NA	155409492	155405104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155405100_155409500
ES.20470.9	chr2	-	1788	12	FSM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	-61	-3	35	3	multi-exon	FALSE	canonical	3	4	junction_11	301.306960254025	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGACTCATTGTTTCA	8385	False	NA	-7	True	AATAAA	-14	NA	155434695	155405105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155434613
ES.20471.1	chr2	-	3218	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	-15	1	-15	-1	multi-exon	TRUE	canonical	3	309	junction_12	37.6501520663235	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGACTTTGTCCATGATG	NA	False	NA	6	True	ATTAAA	-41	NA	155534319	155476191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.10	chr2	-	3262	18	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	23	-12	intron_retention	FALSE	canonical	3	309	junction_11	38.5670673648011	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	-5	True	AATAAA	-39	NA	155534279	155476202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.12	chr2	-	3211	20	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	113.593555472462	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATGTGGACCTGACT	NA	False	NA	-6	True	AATAAA	-38	NA	155534247	155476203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155527428_155527506_155534058
ES.20471.14	chr2	-	3019	18	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.4447990585196	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534251	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480083_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.15	chr2	-	3125	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.1375782910172	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534251	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499853_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.17	chr2	-	3093	18	NNC	ENSMUSG00000038324.14	novel	3091	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.613196842614	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534251	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155510294_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.18	chr2	-	3128	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.1487156854025	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534251	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486855_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.19	chr2	-	4237	18	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	-17	-15	intron_retention	FALSE	canonical	3	309	junction_11	38.5424764558465	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534321	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.2	chr2	-	3187	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	-66	-30	-14	-7	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACCTGACTTTGTCC	NA	False	NA	0	True	AATAAA	-44	NA	155534318	155476197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.20	chr2	-	4543	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	12	-15	intron_retention	TRUE	canonical	0	0	junction_13	121.14179020195	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534240	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155507676_155507722_155507779_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.21	chr2	-	3116	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	15	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	91.5126821137613	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534237	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479681_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.22	chr2	-	3128	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	91.7909763175735	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGATGTGGACCTGA	NA	False	NA	-8	True	AATAAA	-36	NA	155534251	155476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508129_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.23	chr2	-	2865	20	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.7137645893132	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACTGATGTGGACCTG	NA	False	NA	-9	True	AATAAA	-35	NA	155534251	155476206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155476428_155476697_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.27	chr2	-	157	1	Intergenic	novelGene_16936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	9920	False	NA	NA	False	NA	NA	NA	155489204	155489047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155489000_155489200
ES.20471.3	chr2	-	4085	4	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	-205	-7	intron_retention	FALSE	canonical	3	335	junction_2	20.4341761653255	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACCTGACTTTGTCC	NA	False	NA	0	True	AATAAA	-44	NA	155482665	155476197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155477363_155478115_155478229_155479577_155479687_155479967
ES.20471.4	chr2	-	5457	17	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-9	intron_retention	FALSE	canonical	3	309	junction_10	38.7709620721488	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACCTGACTTTGT	NA	False	NA	-2	True	AATAAA	-42	NA	155534251	155476199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155481484_155482393_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.5	chr2	-	3129	19	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	91.9298578560421	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACCTGACTTTGT	NA	False	NA	-2	True	AATAAA	-42	NA	155534245	155476199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483604_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.7	chr2	-	5473	3	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	51731	-27	-61	-10	intron_retention	FALSE	canonical	3	352	junction_1	3	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGGACCTGACTTTG	NA	False	NA	-3	True	AATAAA	-41	NA	155482521	155476200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155477061_155477155_155477363_155478115
ES.20471.8	chr2	-	3143	17	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-12	intron_retention	FALSE	canonical	0	0	junction_4	97.3501853811794	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	-5	True	AATAAA	-39	NA	155534251	155476202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20471.9	chr2	-	4144	18	NNC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	1	-12	intron_retention	FALSE	canonical	0	0	junction_5	94.7827236677779	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGTGGACCTGACTT	NA	False	NA	-5	True	AATAAA	-39	NA	155534251	155476202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480083_155481392_155481484_155482393_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ES.20472.1	chr2	-	178	1	Intergenic	novelGene_16939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTACATTTAG	NA	False	NA	NA	False	NA	NA	NA	155536206	155536028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155536000_155536200
ES.20473.1	chr2	-	2830	11	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	90	4	combination_of_known_junctions	TRUE	canonical	1	2	junction_4	96.8371829412649	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATTAGCGTCAGCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	155571305	155543592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155554631_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.11	chr2	-	5925	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	57	-350	intron_retention	FALSE	canonical	3	287	junction_6	18.8273507377557	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTTTACATGCTGGAT	NA	False	NA	-11	True	AATAAA	-15	NA	155571338	155543946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.12	chr2	-	1840	11	NNC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	27	-351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	95.4222720333152	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGTTTTACATGCTGGA	NA	False	NA	-12	True	AATAAA	-14	NA	155571368	155543947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571222
ES.20473.13	chr2	-	2488	11	NNC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	70	-351	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	95.9525403519886	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGTTTTACATGCTGGA	NA	False	NA	-12	True	AATAAA	-14	NA	155571325	155543947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155554638_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.14	chr2	-	3315	6	ISM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	11249	352	-1867	-352	3prime_fragment	FALSE	canonical	3	304	junction_1	13.5705563629499	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155560146	155543948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929
ES.20473.15	chr2	-	1740	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	-14	-352	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	100.051961808494	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155571409	155543948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.16	chr2	-	3704	9	ISM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	679	352	679	-352	3prime_fragment	FALSE	canonical	3	287	junction_6	14.8323969741913	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155570716	155543948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554
ES.20473.19	chr2	-	237	1	Intergenic	novelGene_16940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTGACAAATTGTATA	6876	False	NA	NA	False	AATAAA	-22	NA	155546211	155545974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155546000_155546200
ES.20473.2	chr2	-	2217	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	77	-4	77	4	multi-exon	FALSE	canonical	3	287	junction_6	17.8672885463911	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATTAGCGTCAGCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	155571318	155543592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.3	chr2	-	1952	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	27	311	27	-311	multi-exon	FALSE	canonical	3	287	junction_6	17.8672885463911	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAAGTTTTGTGCTT	NA	False	NA	28	True	GATAAA	-10	NA	155571368	155543907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.4	chr2	-	4026	9	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	80	-341	intron_retention	FALSE	canonical	3	9	junction_4	105.77681397641	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTGGATTCTTGATAA	NA	False	NA	-2	True	AATAAA	-24	NA	155571315	155543937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155555400_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.5	chr2	-	3547	6	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	-4345	-344	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	125.372405257297	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGCTGGATTCTTGA	NA	False	NA	-5	True	AATAAA	-21	NA	155562624	155543940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155560183
ES.20473.6	chr2	-	5028	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	70	-347	intron_retention	FALSE	canonical	3	287	junction_5	17.8138522878498	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	155571325	155543943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20473.8	chr2	-	2519	11	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	49	-348	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	96.8371829412649	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTACATGCTGGATTC	NA	False	NA	-9	True	AATAAA	-17	NA	155571346	155543944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155554631_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ES.20474.1	chr2	+	132	1	Intergenic	novelGene_16941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAATAAAACAAA	3789	False	NA	NA	False	NA	NA	NA	155571965	155572097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155572000_155572100
ES.20475.1	chr2	+	176	1	Intergenic	novelGene_16942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACATAG	6269	False	NA	NA	False	NA	NA	NA	155574445	155574621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155574400_155574600
ES.20476.1	chr2	+	1212	5	NNC	ENSMUSG00000027611.13	novel	1597	4	NA	NA	-11	-205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.866025403784439	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAATCAAACATAGTT	NA	False	NA	NA	False	NA	NA	NA	155593025	155597183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155593077_155593264_155593385_155595264_155595523_155596159_155596448_155596688
ES.20477.1	chr2	-	1447	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	161	7	161	-7	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAACGCTGTACAAACC	7260	False	NA	NA	False	NA	NA	NA	155661185	155659656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155661004_155661085
ES.20478.1	chr2	-	1347	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	150	3	-9	2	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCTGTGTGTGTG	NA	False	NA	-6	True	ATTAAA	-19	NA	155668695	155661754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ES.20478.10	chr2	-	1394	2	FSM	ENSMUSG00000027613.16	ENSMUST00000109638.2	1382	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	1052	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTCCTTATGAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	155668595	155667085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155668131_155668246
ES.20478.3	chr2	-	955	6	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	-42	-1	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	639.961123819252	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCAGTGTGCTGTGTGT	NA	False	NA	-9	True	ATTAAA	-16	NA	155668625	155661757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668565
ES.20478.4	chr2	-	4070	3	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	-26	-1	intron_retention	FALSE	canonical	0	0	junction_2	780.5	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCAGTGTGCTGTGTGT	NA	False	NA	-9	True	ATTAAA	-16	NA	155668609	155661757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155665289_155665784_155665961_155668246
ES.20478.7	chr2	-	1235	6	NNC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	654.824984251517	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCAGTGTGCTGTGTG	NA	False	NA	-10	True	ATTAAA	-15	NA	155668594	155661758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155662032_155664756_155664939_155665111_155665282_155665784_155665961_155668044_155668131_155668246
ES.20478.9	chr2	-	1094	5	ISM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	251	2880	-11	125	5prime_fragment	FALSE	canonical	3	1052	junction_4	254.768890369291	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGCTCACTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	155668594	155664631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ES.20479.1	chr2	+	1706	1	Intergenic	novelGene_16944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCGAGGCAAGAATGGG	NA	False	NA	NA	False	NA	NA	NA	155733719	155735425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155733700_155735400
ES.2048.1	chr1	-	3184	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	82	-2666	82	2666	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180596139	180588395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180591486_180596045
ES.2048.2	chr1	-	1482	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	50	-932	50	932	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGGTTATAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	180596171	180590129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180591486_180596045
ES.20480.1	chr2	+	4447	1	Intergenic	novelGene_16946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCAAAAAAAGAAAAGAGA	2533	False	NA	NA	False	NA	NA	NA	155757594	155762041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155757600_155762000
ES.20481.1	chr2	+	178	1	Intergenic	novelGene_16947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	155766901	155767079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155766900_155767100
ES.20482.1	chr2	+	172	1	Intergenic	novelGene_16948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	155769150	155769322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155769200_155769300
ES.20483.1	chr2	-	3297	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	260	-924	0	897	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTATGAGACACCATTA	NA	False	NA	NA	False	GATAAA	-20	NA	155771970	155687916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.10	chr2	-	2332	9	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	143.430677942343	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTGCTCCTGGAATG	NA	False	NA	-37	True	AATAAA	-14	NA	155771966	155688819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.12	chr2	-	2295	9	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	148.043015286099	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTGCTCCTGGAATG	NA	False	NA	-37	True	AATAAA	-14	NA	155771985	155688819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.13	chr2	-	2203	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	250	180	0	-180	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTTAAGATGCTTTT	NA	False	NA	NA	False	AAAACA	-23	NA	155771980	155689020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.14	chr2	-	2038	9	NIC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	0	-236	combination_of_known_splicesites	FALSE	canonical	2	19	junction_3	140.423856146312	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGAGGTATGCGCCA	NA	False	NA	NA	False	TATAAA	-23	NA	155771980	155689076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.15	chr2	-	4968	9	FSM	ENSMUSG00000005882.19	ENSMUST00000123790.8	1436	9	214	-3746	1	-236	multi-exon	FALSE	canonical	3	321	junction_8	49.0051017752234	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGAGGTATGCGCCA	NA	False	NA	NA	False	TATAAA	-23	NA	155771969	155689076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.16	chr2	-	2189	10	NNC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	0	-238	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	138.350601331866	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTGTGAGGTATGCGC	NA	False	NA	NA	False	TATAAA	-21	NA	155771980	155689078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771888
ES.20483.17	chr2	-	1439	10	NNC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	79	4	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_9	140.713350161171	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTTGTTCCAAGGT	NA	False	NA	0	True	ATTAAA	-24	NA	155771859	155689862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771733
ES.20483.18	chr2	-	1357	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	250	1026	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTCTTTGTTCCA	NA	False	NA	-4	True	ATTAAA	-20	NA	155771980	155689866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.19	chr2	-	1297	9	NNC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	179.044512621862	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGCCATGGTTTTTCT	NA	False	NA	-12	True	ATTAAA	-12	NA	155771980	155689874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155751272_155751352_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.2	chr2	-	2462	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	245	-74	-5	47	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTGCACATTAATTCA	NA	False	NA	16	True	NA	NA	NA	155771985	155688766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.20	chr2	-	1027	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	261	1345	1	-7	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCACTCGTGTTGAGT	NA	False	NA	-17	True	NA	NA	NA	155771969	155690185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.21	chr2	-	690	8	NNC	ENSMUSG00000005882.19	novel	624	7	NA	NA	1	-3293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	157.358553265192	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAATTCTCTCTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	155771969	155715976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155716093_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.22	chr2	-	6833	1	Intergenic	novelGene_16943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	763	False	NA	NA	False	NA	NA	NA	155728638	155721805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155721800_155728600
ES.20483.23	chr2	-	2466	1	Intergenic	novelGene_16945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTATTATCACTCTCTG	NA	False	NA	NA	False	NA	NA	NA	155748526	155746060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155746100_155748500
ES.20483.24	chr2	-	2262	1	NIC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	817	440	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGTTTCTCTCCACCA	NA	False	NA	NA	False	NA	NA	NA	155751707	155749445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155749400_155751700
ES.20483.4	chr2	-	3335	9	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	0	4	intron_retention	FALSE	canonical	3	315	junction_1	59.1137674319612	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGGAATGGATGGAAAAA	NA	False	NA	-27	True	AATAAA	-24	NA	155771970	155688809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.5	chr2	-	5985	6	NNC	ENSMUSG00000005882.19	novel	2107	7	NA	NA	5018	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	182.258497744275	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGGAATGGATGGAAAAA	NA	False	NA	-27	True	AATAAA	-24	NA	155747506	155688809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155743217_155743517_155743574_155743597_155743671
ES.20483.6	chr2	-	2231	8	NIC	ENSMUSG00000005882.19	novel	2633	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	154.654849419537	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771970	155688815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155693278_155693393_155700031_155700110_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ES.20483.8	chr2	-	1997	6	NIC	ENSMUSG00000005882.19	novel	1997	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	166.584032848289	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771980	155688815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155690447_155693278_155693393_155700031_155700052_155753665_155753757_155763554_155763648_155771932
ES.20483.9	chr2	-	2437	10	NNC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	176.171493328882	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCTCCTGGAATGGAT	NA	False	NA	-34	True	AATAAA	-17	NA	155771963	155688816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771888
ES.20484.1	chr2	-	1564	2	FSM	ENSMUSG00000038259.5	ENSMUST00000040162.3	2320	2	729	27	729	-27	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGCTGAATCTTCATG	NA	False	NA	NA	False	ATTAAA	-16	NA	155786558	155782969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155784338_155786362
ES.20485.1	chr2	+	177	1	Intergenic	novelGene_16949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAGAAATAGTAT	NA	False	NA	NA	False	NA	NA	NA	155792523	155792700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155792500_155792700
ES.20486.1	chr2	+	9335	33	NNC	ENSMUSG00000038241.17	novel	6361	15	NA	NA	-183	0	intron_retention	TRUE	non_canonical	0	0	junction_1	34.7243047986565	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798194	155840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798357_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806829_155807016_155807232_155807485_155809162_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821518_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.10	chr2	+	9666	29	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	33.7532311378466	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCCTTGGCTGCTGTCT	NA	False	NA	9	True	AATAAA	-16	NA	155798477	155840817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798578_155803791_155804075_155804819_155804877_155805634_155805716_155806029_155806196_155806908_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155829037_155830231_155831541_155832135_155832341_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.11	chr2	+	2896	17	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	3	2283	intron_retention	FALSE	canonical	1	1	junction_16	16.8962828752362	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	155798480	155818648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818308
ES.20486.12	chr2	+	8016	34	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	29.8558827934084	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155798480	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809162_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.13	chr2	+	7958	34	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	28.9820881322738	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155798481	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155830452_155830498_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.14	chr2	+	1395	9	NNC	ENSMUSG00000038241.17	novel	1254	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.2979124632844	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAGTTAACTCATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	155798488	155809714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155801350_155801467_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477
ES.20486.15	chr2	+	10118	32	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	30.1382178440912	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155798488	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798578_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809162_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.16	chr2	+	2952	18	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-3	2283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	16.3635175277919	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	155798488	155818648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308
ES.20486.18	chr2	+	7715	31	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-3	-2876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	20.8654152979411	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGCCCATGTGCTGCT	NA	False	NA	NA	False	TATAAA	-15	NA	155798488	155837944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238
ES.20486.19	chr2	+	7845	33	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_16	25.0186649074246	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798488	155840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817723_155818067_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.2	chr2	+	7958	33	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	25.0474549605344	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798437	155840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.20	chr2	+	4359	24	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	8	30	intron_retention	FALSE	canonical	3	36	junction_1	12.0553230091293	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGTGGCGCACGCCTT	NA	False	NA	NA	False	AAGAAA	-11	NA	155798499	155828563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738
ES.20486.21	chr2	+	8639	33	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-8	1	intron_retention	FALSE	non_canonical	0	0	junction_11	31.850664730112	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCTGTCTCTGC	NA	False	NA	13	True	AATAAA	-20	NA	155798505	155840821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798578_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806829_155807016_155807232_155807485_155809477_155809575_155810677_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155831030_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.22	chr2	+	8953	32	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	25.4184132787793	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155798505	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812091_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.23	chr2	+	8492	33	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_11	30.5437698229934	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798505	155840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807485_155809162_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155815886_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.24	chr2	+	8710	33	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-3	764	intron_retention	FALSE	non_canonical	0	0	junction_31	22.1379728916177	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTAATTGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	155798510	155841584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837338_155838191_155838255_155840087
ES.20486.26	chr2	+	4041	23	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	5441	22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.6758721134399	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGGTCAGTGGTGGCG	NA	False	NA	NA	False	AAGAAA	-3	NA	155803954	155828555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738
ES.20486.27	chr2	+	7537	30	ISM	ENSMUSG00000038241.17	ENSMUST00000109619.9	7977	33	7154	1	7118	-1	3prime_fragment	FALSE	canonical	3	45	junction_9	22.3972352633873	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155805631	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.28	chr2	+	3936	20	ISM	ENSMUSG00000038241.17	ENSMUST00000109619.9	7977	33	7634	12092	7598	195	internal_fragment	FALSE	canonical	3	45	junction_8	11.8094286008306	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGACTTCCACTTG	NA	False	NA	NA	False	AATAAA	-15	NA	155806111	155828728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738
ES.20486.29	chr2	+	4883	12	NNC	ENSMUSG00000038241.17	novel	4930	23	NA	NA	7605	2283	intron_retention	FALSE	canonical	2	4	junction_8	21.4256353754018	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	155806118	155818648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155806196_155806908_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812816_155813867_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818003_155818132_155818308
ES.20486.30	chr2	+	3516	3	NIC	ENSMUSG00000038241.17	novel	4930	23	NA	NA	8871	2836	intron_retention	FALSE	canonical	3	47	junction_1	17	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCTCTACGACGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	155807384	155812550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155809575_155810674_155811365_155811914
ES.20486.31	chr2	+	5243	18	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	8894	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.9933673244041	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTTGGCTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	155807407	155840818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816324_155828997_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.32	chr2	+	8269	27	NNC	ENSMUSG00000038241.17	novel	6361	15	NA	NA	9410	-1	intron_retention	FALSE	canonical	2	4	junction_8	28.4044385647299	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155807923	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155809262_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.33	chr2	+	7958	21	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-6322	-2	intron_retention	FALSE	canonical	1	4	junction_2	31.2600383876924	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTTGGCTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	155811986	155840818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155814013_155815262_155815410_155816169_155816404_155817590_155817785_155818067_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.35	chr2	+	5883	20	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-2096	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.5577262745144	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTTGGCTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	155816212	155840818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155830452_155830530_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.36	chr2	+	5211	15	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-355	-1587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	29.8003561134728	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTGTAAATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	155821122	155839233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155838355
ES.20486.37	chr2	+	7192	10	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	7282	2	-2212	-2	3prime_fragment	FALSE	canonical	3	55	junction_3	24.5256227818889	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTTGGCTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	155825590	155840818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155827293_155827738_155828082_155828914_155829037_155830231_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.38	chr2	+	6441	10	NIC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-2080	-1	intron_retention	FALSE	canonical	3	55	junction_2	26.5362551899505	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155825722	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.39	chr2	+	4567	11	ISM	ENSMUSG00000038241.17	ENSMUST00000109619.9	7977	33	28673	1	-652	-1	3prime_fragment	FALSE	canonical	3	55	junction_3	25.311854930052	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	1006	False	NA	11	True	AATAAA	-18	NA	155827150	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.40	chr2	+	1802	10	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	173	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	38.1675966246077	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	1863	False	NA	11	True	AATAAA	-18	NA	155828007	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155832341_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.42	chr2	+	3795	19	Fusion	ENSMUSG00000005881.14_ENSMUSG00000038241.17	novel	1377	13	NA	NA	5529	0	multi-exon	FALSE	canonical	0	0	junction_5	397.802513197407	427	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	7219	False	NA	14	True	AATAAA	-17	NA	155833363	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155847313_155847458_155849627_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155858123_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.43	chr2	+	3013	6	ISM	ENSMUSG00000038241.17	ENSMUST00000148191.2	6361	15	16020	-1488	6494	1488	3prime_fragment	FALSE	canonical	3	82	junction_1	17.1813852759316	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTTCCCTGTACT	8184	False	NA	NA	False	NA	NA	NA	155834328	155842308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.44	chr2	+	2015	1	Genic_Genomic	ENSMUSG00000038241.17	novel	NA	NA	NA	NA	12033	1062	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	155839867	155841882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_155839900_155841900
ES.20486.45	chr2	+	1353	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	22	2	22	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155849986	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.46	chr2	+	1474	12	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	29	0	intron_retention	FALSE	canonical	3	758	junction_3	67.1720376691678	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155849993	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850149_155850284_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.47	chr2	+	1187	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155849994	155860198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.48	chr2	+	3366	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	-24	0	intron_retention	FALSE	canonical	3	778	junction_5	73.2191231851352	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850001	155860199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.49	chr2	+	1553	12	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	40	2	-21	0	intron_retention	FALSE	canonical	3	758	junction_4	76.2069821750698	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155850004	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716
ES.20486.5	chr2	+	7977	34	NNC	ENSMUSG00000038241.17	novel	7977	33	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.0858581619451	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTTGGCTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	155798465	155840818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798578_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812093_155812632_155812816_155813867_155814013_155815262_155815410_155815886_155815941_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.50	chr2	+	1313	12	NNC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	261.145189343697	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155850016	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853331_155858607_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.51	chr2	+	1992	12	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	758	junction_4	75.8357293842399	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155850032	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.53	chr2	+	3831	8	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	10	-2	intron_retention	FALSE	canonical	3	778	junction_6	67.6056995544377	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGACTGGTCTCAGTGT	NA	False	NA	12	True	AATAAA	-15	NA	155850035	155860195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155852454_155853019_155853186_155853268_155853327_155857908_155858874_155859499
ES.20486.54	chr2	+	1398	14	NNC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	320.54939893839	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155850038	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155851406_155851504_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.55	chr2	+	1327	13	NNC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	245.251684782977	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGGTCTCAGTGTG	NA	False	NA	13	True	AATAAA	-16	NA	155850040	155860196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858779_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.56	chr2	+	3681	7	NIC	ENSMUSG00000005881.14	novel	1349	14	NA	NA	92	1	intron_retention	FALSE	canonical	3	778	junction_4	42.878380981044	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTCTCAGTGTGAT	NA	False	NA	15	True	AATAAA	-18	NA	155850234	155860198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155850572_155850779_155852454_155853019_155853186_155853268_155853327_155857908_155858874_155859499_155859773_155859990
ES.20486.57	chr2	+	1192	12	ISM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	319	2	141	0	3prime_fragment	FALSE	canonical	3	758	junction_3	70.826875414575	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155850283	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ES.20486.58	chr2	+	177	1	Intergenic	novelGene_16952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAATGTGGA	NA	False	NA	NA	False	NA	NA	NA	155853930	155854107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155853900_155854100
ES.20486.59	chr2	+	4616	3	NIC	ENSMUSG00000005881.14	novel	463	6	NA	NA	2502	-1	intron_retention	FALSE	canonical	3	847	junction_2	55	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGGTCTCAGTGTG	NA	False	NA	13	True	AATAAA	-16	NA	155854868	155860196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155858723_155858808_155858874_155859499
ES.20486.6	chr2	+	7964	33	NNC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	27.3391424689492	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	False	NA	11	True	AATAAA	-18	NA	155798469	155840819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810756_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831416_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.60	chr2	+	3704	4	NIC	ENSMUSG00000005881.14	novel	463	6	NA	NA	-2865	0	intron_retention	FALSE	canonical	3	806	junction_3	63.754738385995	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155855563	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155858723_155858808_155858874_155859499_155859773_155859990
ES.20486.61	chr2	+	2826	1	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	-1057	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGTCTCAGTGTGA	NA	False	NA	14	True	AATAAA	-17	NA	155857371	155860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155857400_155860200
ES.20486.7	chr2	+	7990	33	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-8	0	intron_retention	FALSE	canonical	3	36	junction_1	22.1895245555194	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798469	155840820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ES.20486.8	chr2	+	3233	18	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-7	2482	intron_retention	FALSE	canonical	3	36	junction_1	10.513461464823	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTATGAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	155798470	155818847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308
ES.20486.9	chr2	+	3079	18	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	-7	2328	intron_retention	FALSE	canonical	3	36	junction_1	10.513461464823	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCTCTTCCAAAG	NA	False	NA	NA	False	NA	NA	NA	155798470	155818693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308
ES.20487.1	chr2	-	178	1	Intergenic	novelGene_16950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	155802516	155802338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155802300_155802500
ES.20488.1	chr2	-	237	1	Intergenic	novelGene_16951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	155851965	155851728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155851700_155852000
ES.20489.1	chr2	-	170	1	Intergenic	novelGene_16953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTAGGATTTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	155870198	155870028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155870000_155870200
ES.2049.1	chr1	-	179	1	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180610365	180610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180610200_180610400
ES.20490.1	chr2	+	176	1	Intergenic	novelGene_16954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTGA	3586	False	NA	NA	False	NA	NA	NA	155872822	155872998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155872800_155873000
ES.20491.1	chr2	-	191	1	Intergenic	novelGene_16955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGTTATGAA	NA	False	NA	NA	False	NA	NA	NA	155906787	155906596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155906600_155906800
ES.20492.1	chr2	+	1511	12	FSM	ENSMUSG00000038180.12	ENSMUST00000038860.12	1473	12	-40	2	6	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.51781487472492	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGGTTTGTGCTAAAG	NA	False	NA	10	True	ATTAAA	-21	NA	155907123	155911419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155907592_155908053_155908159_155908486_155908554_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
ES.20492.2	chr2	+	2574	12	NIC	ENSMUSG00000038180.12	novel	1473	12	NA	NA	6	-36	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.75246982529323	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACTGAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	155907123	155912501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155907573_155908053_155908159_155908486_155908554_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
ES.20492.3	chr2	+	2064	11	NIC	ENSMUSG00000038180.12	novel	747	9	NA	NA	10	-164	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	7.18401002226472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCGCACGCCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	155907671	155912373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155907806_155908053_155908159_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
ES.20492.4	chr2	+	1147	12	NIC	ENSMUSG00000038180.12	novel	747	9	NA	NA	34	-8	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.06486846443059	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGAATGGAGGTTTGTG	NA	False	NA	4	True	ATTAAA	-15	NA	155907695	155911413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155907806_155908053_155908159_155908486_155908554_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
ES.20493.1	chr2	+	6979	1	Antisense	novelGene_ENSMUSG00000098950.8_AS_novelGene_ENSMUSG00000074643.13_AS_novelGene_ENSMUSG00000089824.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGGGGCCAGGCATG	4157	False	NA	NA	False	NA	NA	NA	155934252	155941231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155934300_155941200
ES.20494.1	chr2	+	224	1	Antisense	novelGene_ENSMUSG00000074643.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTCAGCACTTGGAAGG	NA	False	NA	NA	False	NA	NA	NA	155944220	155944444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155944200_155944400
ES.20495.1	chr2	+	3778	1	Intergenic	novelGene_16956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGGTTGGTCTGGACT	NA	False	NA	NA	False	NA	NA	NA	155946498	155950276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155946500_155950300
ES.20495.2	chr2	+	1513	1	Intergenic	novelGene_16957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155948438	155949951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155948400_155950000
ES.20496.1	chr2	-	3503	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-52	-10	-26	7	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTTGTGTTTGGTGC	NA	False	NA	7	True	AATAAA	-28	NA	155953911	155913754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.10	chr2	-	3662	14	NIC	ENSMUSG00000074643.13	novel	3466	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	257	junction_13	30.7657690360358	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953864	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.11	chr2	-	3406	16	NNC	ENSMUSG00000098950.8	novel	4955	16	NA	NA	188	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	84.165603953687	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953633	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953517
ES.20496.12	chr2	-	3651	16	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_14	83.9522086268928	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCGCTCTTGTTGTG	NA	False	NA	-1	True	AATAAA	-20	NA	155953881	155913762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ES.20496.13	chr2	-	3243	15	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	37	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	86.2274223628825	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCGCTCTTGTTGTG	NA	False	NA	-1	True	AATAAA	-20	NA	155953746	155913762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.16	chr2	-	3558	16	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-12	1	intron_retention	FALSE	canonical	3	55	junction_14	83.8446712015074	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGCCGCTCTTGTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	155953841	155913763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ES.20496.17	chr2	-	3608	16	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	55	junction_14	82.5249861153174	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953879	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ES.20496.18	chr2	-	3646	14	NNC	ENSMUSG00000074643.13	novel	3466	15	NA	NA	-12	0	intron_retention	TRUE	canonical	0	0	junction_11	90.8138091316188	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953841	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920575_155920671_155920895_155920987_155921163_155921258_155921385_155953705
ES.20496.19	chr2	-	3696	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_14	112.671241200894	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953863	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915913_155916095_155916230_155918156_155918209_155919318_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945318_155953705
ES.20496.2	chr2	-	5544	17	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	0	4	intron_retention	FALSE	canonical	2	4	junction_14	81.974748398516	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155953846	155913760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920895_155920982_155921163_155921258_155921385_155938337_155940293_155945268_155945350_155953705
ES.20496.21	chr2	-	3419	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	84.4055290448045	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953879	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953747
ES.20496.22	chr2	-	3669	18	NNC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	106.138024651002	693	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953877	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920996_155921163_155921258_155921385_155940149_155940293_155945268_155945350_155953705
ES.20496.23	chr2	-	3342	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	83.2064634241569	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953880	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953825
ES.20496.24	chr2	-	3519	15	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	-10	0	intron_retention	FALSE	canonical	3	257	junction_14	28.2377840663816	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953839	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.25	chr2	-	3408	15	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	88.1137078450571	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953898	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.26	chr2	-	5059	15	NNC	ENSMUSG00000098950.8	novel	4955	16	NA	NA	15688	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.5966230362046	368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	7040	False	NA	-3	True	AATAAA	-18	NA	155923160	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920338_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258
ES.20496.27	chr2	-	3512	15	FSM	ENSMUSG00000074643.13	ENSMUST00000142975.8	3466	15	-46	0	1	0	multi-exon	FALSE	canonical	3	257	junction_14	29.7565804761342	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953854	155913764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.28	chr2	-	6759	15	ISM	ENSMUSG00000098950.8	ENSMUST00000127956.9	4955	16	15148	1	13991	-1	3prime_fragment	FALSE	canonical	3	298	junction_7	23.8709327126409	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGTGGCCGCTCTTGTT	5343	False	NA	-4	True	AATAAA	-17	NA	155924857	155913765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258
ES.20496.3	chr2	-	4061	16	NIC	ENSMUSG00000098950.8	novel	4955	16	NA	NA	-236	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	112.424078085316	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	6210	False	NA	1	True	AATAAA	-22	NA	155939084	155913760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915979_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155938337
ES.20496.31	chr2	-	3622	18	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	88.6801725888071	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953850	155913766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945318_155953705
ES.20496.32	chr2	-	3307	14	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	91.4384715688109	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953880	155913766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.35	chr2	-	3241	16	NNC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	84.6455091674817	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953883	155913766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921283_155953825
ES.20496.36	chr2	-	3451	17	NNC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	181	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_16	101.132261791181	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953602	155913766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953517
ES.20496.37	chr2	-	3578	16	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	55	junction_14	72.9343692796628	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGTGGCCGCTCTTG	NA	False	NA	-6	True	AATAAA	-15	NA	155953842	155913767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
ES.20496.38	chr2	-	3582	18	NNC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	112.918992919427	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGTGGCCGCTCTTG	NA	False	NA	-6	True	AATAAA	-15	NA	155953855	155913767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155943777_155943877_155945268_155945318_155953705
ES.20496.39	chr2	-	3660	16	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	55	junction_14	73.2497705722611	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCAGTGGCCGCTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	155953864	155913768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
ES.20496.4	chr2	-	3402	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	20	junction_16	98.3462473864661	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155953887	155913760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953825
ES.20496.40	chr2	-	5472	18	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	79.8856015972876	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTCAGTGGCCGCTCT	NA	False	NA	-8	True	AATAAA	-13	NA	155953859	155913769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155938337_155940293_155945268_155945350_155953705
ES.20496.41	chr2	-	2713	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	-4	732	0	-730	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCAGACTGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	155953863	155914496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ES.20496.42	chr2	-	8545	1	FSM	ENSMUSG00000103285.2	ENSMUST00000192167.2	1682	1	-6834	-29	-6834	29	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGAACCTTTTTGAACA	NA	False	NA	NA	False	AAAAAG	-41	NA	155935045	155926500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155926500_155935000
ES.20496.43	chr2	-	6673	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-4	-2	1	2	multi-exon	FALSE	canonical	3	245	junction_2	24	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACAGTACTTCTTTGAG	NA	False	NA	0	True	AATAAA	-39	NA	155953880	155933875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.45	chr2	-	6611	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	22	2	-18	-2	multi-exon	FALSE	canonical	3	132	junction_2	80.5	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGCACAGTACTTCTT	NA	False	NA	-4	True	AATAAA	-35	NA	155953854	155933879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.46	chr2	-	6552	2	NIC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	-14	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTAACTGCACAGTA	NA	False	NA	-10	True	AATAAA	-29	NA	155953850	155933885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155940293_155953705
ES.20496.47	chr2	-	6598	3	NNC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	197	-20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	144.5	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGCTTTAATGCTTT	NA	False	NA	-22	True	AATAAA	-17	NA	155953639	155933897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155940293_155945268_155945350_155953517
ES.20496.48	chr2	-	6293	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	34	308	-6	-308	multi-exon	FALSE	canonical	3	132	junction_2	80.5	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACCGTAATCTGTCC	NA	False	NA	7	True	AATAAA	-32	NA	155953842	155934185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.49	chr2	-	6360	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-4	311	1	-311	multi-exon	FALSE	canonical	3	245	junction_2	24	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAAGACCGTAATCTG	NA	False	NA	4	True	AATAAA	-29	NA	155953880	155934188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.5	chr2	-	5424	18	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	88.4872090144646	693	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCGCTCTTGTTGTGTT	NA	False	NA	1	True	AATAAA	-22	NA	155953834	155913760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155938337_155940293_155945268_155945318_155953705
ES.20496.50	chr2	-	6037	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	22	608	-18	-608	multi-exon	FALSE	canonical	3	245	junction_2	24	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGACTTGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	155953854	155934485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.51	chr2	-	5996	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	24	615	-16	-615	multi-exon	FALSE	canonical	3	132	junction_2	80.5	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTAGTTCCTGACTTG	NA	False	NA	NA	False	NA	NA	NA	155953852	155934492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.52	chr2	-	5799	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	25	843	-15	-843	multi-exon	FALSE	canonical	3	245	junction_2	24	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTCTCCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	155953851	155934720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.53	chr2	-	4988	1	NIC	ENSMUSG00000098950.8	novel	4955	16	NA	NA	76	-13598	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTCATACCTCTCGTCA	5365	False	NA	NA	False	NA	NA	NA	155939929	155934941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155934900_155939900
ES.20496.54	chr2	-	5391	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	13	1263	13	-1263	multi-exon	FALSE	canonical	3	245	junction_2	24	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAGAATTGTGTTCCG	NA	False	NA	NA	False	AATAAA	-27	NA	155953863	155935140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.55	chr2	-	5305	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-3	1365	2	-1365	multi-exon	FALSE	canonical	3	245	junction_2	24	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTATTTTGTTATTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	155953879	155935242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.56	chr2	-	5256	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	12	1367	12	-1367	multi-exon	FALSE	canonical	3	132	junction_2	80.5	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTATTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	155953864	155935244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.57	chr2	-	7648	1	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	-2887	-13901	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTATTTTGTTATTT	2402	False	NA	NA	False	ATTAAA	-17	NA	155942892	155935244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155935200_155942900
ES.20496.59	chr2	-	5097	2	NIC	ENSMUSG00000089824.11	novel	574	3	NA	NA	-2	-1371	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCAACTATTTTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	155953878	155935248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155940293_155953825
ES.20496.6	chr2	-	3545	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	70.9506595723394	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953879	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
ES.20496.60	chr2	-	3951	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	21	2663	-19	-2663	multi-exon	FALSE	canonical	3	132	junction_2	80.5	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTGACCGCCAAGTT	NA	False	NA	1	True	AATAAA	-25	NA	155953855	155936540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.61	chr2	-	4008	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-4	2663	1	-2663	multi-exon	FALSE	canonical	3	245	junction_2	24	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTGACCGCCAAGTT	NA	False	NA	1	True	AATAAA	-25	NA	155953880	155936540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.62	chr2	-	3793	3	NNC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	248	2753	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	144.5	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGGTTTGTGCTAAAT	NA	False	NA	NA	False	TATAAA	-9	NA	155953588	155936651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155940293_155945268_155945350_155953517
ES.20496.63	chr2	-	3782	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	-35	2920	-13	2607	multi-exon	FALSE	canonical	3	245	junction_2	24	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGTACCTTTATTGCT	NA	False	NA	-8	True	AATAAA	-20	NA	155953911	155936797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945350_155953705
ES.20496.64	chr2	-	3698	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	13	2924	13	2603	multi-exon	FALSE	canonical	3	132	junction_2	80.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953863	155936801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953705
ES.20496.67	chr2	-	7483	2	ISM	ENSMUSG00000089824.11	ENSMUST00000131377.8	1058	3	4575	-2602	4575	2602	3prime_fragment	FALSE	canonical	3	293	junction_1	0	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGTATGTACCTTTA	NA	False	NA	-13	True	AATAAA	-15	NA	155949261	155936802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155940293_155945268
ES.20496.68	chr2	-	3793	4	NNC	ENSMUSG00000089824.11	novel	6635	3	NA	NA	-3	2601	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	59.7011073785254	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTGTATGTACCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	155953839	155936803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155940293_155943299_155943421_155945268_155945318_155953705
ES.20496.69	chr2	-	3814	4	NNC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	-5	2601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.886426694823	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTGTATGTACCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	155953841	155936803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155940293_155945268_155945350_155950564_155950673_155953705
ES.20496.7	chr2	-	3689	18	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	80.1041709319311	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953880	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945350_155953705
ES.20496.70	chr2	-	3638	2	NIC	ENSMUSG00000089824.11	novel	6667	3	NA	NA	-18	2601	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATTGTATGTACCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	155953854	155936803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155940293_155953705
ES.20496.71	chr2	-	3770	4	NNC	ENSMUSG00000089824.11	novel	6635	3	NA	NA	-3	2600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.2253967444162	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCATTGTATGTACCTT	NA	False	NA	-15	True	AATAAA	-13	NA	155953839	155936804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155940293_155943777_155943877_155945268_155945318_155953705
ES.20496.72	chr2	-	3562	3	FSM	ENSMUSG00000089824.11	ENSMUST00000128499.2	574	3	48	-3036	-14	2600	multi-exon	FALSE	canonical	2	20	junction_2	136.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCATTGTATGTACCTT	NA	False	NA	-15	True	AATAAA	-13	NA	155953850	155936804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155940293_155945268_155945318_155953825
ES.20496.73	chr2	-	2396	1	NIC	ENSMUSG00000098950.8	novel	4955	16	NA	NA	507	-15759	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTATCTGGAGAGAACA	5796	False	NA	NA	False	AATAAA	-20	NA	155939498	155937102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155937100_155939500
ES.20496.8	chr2	-	3513	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	-16	-5	0	0	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953879	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ES.20496.9	chr2	-	3606	18	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	106.515265244489	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCCGCTCTTGTTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	155953839	155913761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945350_155953747
ES.20497.1	chr2	+	213	1	Intergenic	novelGene_16960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTTATTTATTTATT	3323	False	NA	NA	False	NA	NA	NA	155982930	155983143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_155982900_155983100
ES.20498.1	chr2	+	563	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	4	2	4	1	multi-exon	FALSE	canonical	3	748	junction_1	118.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCTATTTTTACCTAG	6355	False	NA	15	True	AATAAA	-20	NA	155985962	155987715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155986201_155986378_155986510_155987521
ES.20498.2	chr2	+	385	3	FSM	ENSMUSG00000067847.14	ENSMUST00000119950.2	379	3	-7	1	0	-1	multi-exon	FALSE	canonical	3	37	junction_1	474	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	6545	False	NA	13	True	AATAAA	-18	NA	155986152	155987713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155986201_155986364_155986510_155987521
ES.20498.3	chr2	+	1559	1	NIC	ENSMUSG00000067847.14	novel	569	3	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	6547	False	NA	13	True	AATAAA	-18	NA	155986154	155987713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_155986200_155987700
ES.20498.4	chr2	+	535	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	14	1	7	-1	multi-exon	FALSE	canonical	3	985	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	6559	False	NA	13	True	AATAAA	-18	NA	155986166	155987713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_155986510_155987521
ES.20499.1	chr2	-	2049	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	1	1	1	-1	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCCTTGAATTTTTGAG	3107	False	NA	-3	True	AATAAA	-16	NA	155986105	155965559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.10	chr2	-	2049	13	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	76.2030821044807	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTCCCATTTCCTGT	3127	False	NA	-24	True	ATTAAA	-9	NA	155986085	155965580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155966248_155967200_155967291_155968238_155968364_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.12	chr2	-	2965	12	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	25	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	79.4707701345918	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTCCCATTTCCTGT	3164	False	NA	-24	True	ATTAAA	-9	NA	155986048	155965580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155967291_155968238_155968364_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.13	chr2	-	1921	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	14	116	8	-105	multi-exon	FALSE	canonical	3	228	junction_1	23.0952135493242	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCTTTCCTCTCTTTTG	3120	False	NA	0	True	ATTAAA	-23	NA	155986092	155965674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.14	chr2	-	1717	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	41	293	8	-282	multi-exon	FALSE	canonical	3	228	junction_1	23.0952135493242	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGCTTCTCTGTGAA	3147	False	NA	NA	False	NA	NA	NA	155986065	155965851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.15	chr2	-	2366	8	NNC	ENSMUSG00000027618.18	novel	1649	4	NA	NA	7	-5900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.8554572124707	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTATTTTAGGTGTA	3119	False	NA	NA	False	NA	NA	NA	155986093	155971469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155972252_155972817_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.16	chr2	-	161	1	Intergenic	novelGene_16958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	7084	False	NA	NA	False	NA	NA	NA	155972371	155972210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155972200_155972400
ES.20499.17	chr2	-	234	1	Intergenic	novelGene_16959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGATTTTTACAGTAA	5248	False	NA	NA	False	NA	NA	NA	155974207	155973973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_155974000_155974200
ES.20499.18	chr2	-	3417	1	NIC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	-1968	146	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGCAAGCAAGC	5515	False	NA	NA	False	NA	NA	NA	155983697	155980280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155980300_155983700
ES.20499.19	chr2	-	1642	5	NNC	ENSMUSG00000027618.18	novel	1649	4	NA	NA	-11	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.739810720392	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGCAAGCAAGC	3128	False	NA	NA	False	NA	NA	NA	155986084	155980280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155981485_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.20	chr2	-	1789	4	FSM	ENSMUSG00000027618.18	ENSMUST00000125449.2	1649	4	-19	-121	8	121	multi-exon	FALSE	canonical	3	266	junction_1	23.1564725772779	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAGGGAAAAAAA	3120	False	NA	NA	False	NA	NA	NA	155986092	155980305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.21	chr2	-	1212	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	7	-510	7	510	multi-exon	FALSE	canonical	3	275	junction_2	22	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3119	False	NA	NA	False	NA	NA	NA	155986093	155983196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155984163_155985286_155985379_155985939
ES.20499.22	chr2	-	704	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	5	0	5	0	multi-exon	FALSE	canonical	3	275	junction_2	22	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGCGGGTCAATGGGAC	3117	False	NA	0	True	TTTAAA	-6	NA	155986095	155983706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155984163_155985286_155985379_155985939
ES.20499.3	chr2	-	2989	12	NIC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	244	junction_1	21.2357876634221	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATCCTTGAATTTTTG	3118	False	NA	-5	True	AATAAA	-14	NA	155986094	155965561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.4	chr2	-	1881	12	NIC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	79.3086865897743	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTCCTGATCCTTG	3112	False	NA	-13	True	AATAAA	-6	NA	155986100	155965569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.20499.6	chr2	-	1554	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5502	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	81.7823903722556	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCCTGTCCTGATCCT	3228	False	NA	-15	True	AATAAA	-4	NA	155976227	155965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
ES.20499.7	chr2	-	3877	10	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	6	-2	intron_retention	TRUE	canonical	0	0	junction_2	85.5999884619815	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCCTGTCCTGATCCT	3118	False	NA	-15	True	AATAAA	-4	NA	155986094	155965571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155966248_155967200_155967291_155968234_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ES.205.1	chr1	+	193	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAATAGCTAATTA	NA	False	NA	NA	False	NA	NA	NA	28380258	28380451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_28380300_28380500
ES.2050.1	chr1	-	2358	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATGGTGTCTGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	180619860	180617502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180617500_180619900
ES.20500.1	chr2	+	3712	10	Antisense	novelGene_ENSMUSG00000027620.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATTTTTACTCAATGTC	5757	False	NA	NA	False	NA	NA	NA	155995076	156016465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155996192_156000319_156000400_156000957_156001162_156003487_156003554_156003747_156003885_156004647_156004800_156006723_156006840_156009453_156009512_156009604_156009671_156014747
ES.20500.2	chr2	+	3863	11	Antisense	novelGene_ENSMUSG00000027620.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATTTTTACTCAATGTC	5757	False	NA	NA	False	NA	NA	NA	155995076	156016465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155996192_156000319_156000400_156000957_156001162_156003487_156003554_156003747_156003885_156004647_156004800_156006723_156006840_156009453_156009512_156009604_156009671_156012250_156012401_156014746
ES.20500.3	chr2	+	4198	1	Antisense	novelGene_ENSMUSG00000027620.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTTGTTTTGCTCTTC	8624	False	NA	NA	False	TATAAA	-29	NA	155997943	156002141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155997900_156002100
ES.20500.4	chr2	+	2645	2	Antisense	novelGene_ENSMUSG00000027620.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATTTTTACTCAATGTC	8625	False	NA	NA	False	NA	NA	NA	155997944	156016465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_155998505_156014380
ES.20500.5	chr2	+	3479	4	Antisense	novelGene_ENSMUSG00000027620.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	542	False	NA	NA	False	NA	NA	NA	156008655	156013584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156009512_156009604_156011691_156011896_156012066_156013216
ES.20500.6	chr2	+	417	1	Intergenic	novelGene_16962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	5032	False	NA	NA	False	NA	NA	NA	156013145	156013562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156013100_156013600
ES.20501.1	chr2	-	3725	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-14	-1000	3	990	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTATTACCTAATGAC	NA	False	NA	NA	False	AGTAAA	-16	NA	156022101	155988168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.10	chr2	-	3007	20	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	1015.96738283849	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022155	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.100	chr2	-	4460	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-119	0	intron_retention	FALSE	canonical	3	12	junction_16	682.345907513191	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022277	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806_156021962_156022214
ES.20501.101	chr2	-	3712	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	947.281132087975	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022116	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.102	chr2	-	3195	20	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_16	1035.11465234065	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022131	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.104	chr2	-	4861	14	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1446	1	intron_retention	TRUE	non_canonical	0	0	junction_13	740.710989003653	1530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	4159	False	NA	NA	False	AATAAA	-18	NA	156012597	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156011683_156011888
ES.20501.106	chr2	-	5191	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	1	intron_retention	FALSE	canonical	3	11	junction_15	891.193267168445	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022103	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156020873_156021096_156021161_156021806
ES.20501.108	chr2	-	6711	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	1	intron_retention	FALSE	canonical	3	44	junction_15	901.360993242113	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022158	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.11	chr2	-	4601	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	117	junction_15	813.426692686563	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022086	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156021161_156021806
ES.20501.110	chr2	-	4807	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	2	1	intron_retention	FALSE	canonical	3	6	junction_14	979.936633438895	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022102	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016895_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.112	chr2	-	2814	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	684.801796142504	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022155	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021080_156021161_156021806
ES.20501.113	chr2	-	5696	11	ISM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	11639	9	-451	1	intron_retention	FALSE	canonical	3	1358	junction_5	396.831651963399	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	6237	False	NA	NA	False	AATAAA	-18	NA	156010519	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725
ES.20501.114	chr2	-	2949	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	1	intron_retention	FALSE	canonical	3	117	junction_14	948.846201545251	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022068	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.117	chr2	-	5292	19	NNC	ENSMUSG00000027620.17	novel	2744	18	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_13	974.604528849687	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAAATTTTCGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	156022069	155989167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156011683_156011888_156012402_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.118	chr2	-	3037	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	975.886048802274	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022101	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156009848_156010088_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.119	chr2	-	4332	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	20	junction_14	914.863825970403	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022068	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.12	chr2	-	3677	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	1023.18655600778	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022095	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.120	chr2	-	8387	16	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	533	junction_14	546.260475109326	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022068	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.121	chr2	-	5911	15	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	1090	junction_4	443.422220131245	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022103	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806
ES.20501.122	chr2	-	4615	15	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1090	junction_4	435.314201562082	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022107	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806
ES.20501.125	chr2	-	5890	13	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	2198	0	intron_retention	FALSE	canonical	3	1358	junction_4	366.281388491902	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156017105	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747
ES.20501.126	chr2	-	2745	17	NNC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	665.910642935672	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022068	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996245_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.128	chr2	-	4652	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	0	intron_retention	FALSE	canonical	2	5	junction_13	865.014231729022	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022068	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156021161_156021806
ES.20501.130	chr2	-	2860	18	NNC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	833.200906663604	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022124	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016129_156019255_156019306_156021096_156021161_156021806
ES.20501.131	chr2	-	4809	17	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	21	junction_14	708.980162694098	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022106	155989168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016089_156018322_156019306_156021096_156021161_156021806
ES.20501.132	chr2	-	3569	18	NIC	ENSMUSG00000027620.17	novel	2744	18	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	832.163029675362	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAGAAAATTTTCGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	156022068	155989169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156021096_156021161_156021806
ES.20501.133	chr2	-	7562	17	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	244	junction_14	772.98842771092	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAGAAAATTTTCGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	156022133	155989169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156020873_156021096_156021161_156021806
ES.20501.134	chr2	-	2907	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	1024.72452348447	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAGAAAATTTTCGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	156022084	155989169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.136	chr2	-	2804	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1358	junction_4	413.697388061478	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAGAAAATTTTCGTT	NA	False	NA	NA	False	AATAAA	-15	NA	156022071	155989170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.137	chr2	-	4378	19	NNC	ENSMUSG00000027620.17	novel	2744	18	NA	NA	-135	-2	intron_retention	FALSE	canonical	0	0	junction_3	1085.83033028777	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAGAAAATTTTCGTT	NA	False	NA	NA	False	AATAAA	-15	NA	156022293	155989170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991260_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156020873_156021096_156021161_156021806_156021962_156022214
ES.20501.14	chr2	-	4358	17	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	533	junction_15	609.178336855268	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022157	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.140	chr2	-	6900	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	44	junction_15	824.996209745081	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACAAGAAAATTTTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	156022109	155989171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156018378_156019255_156021161_156021806
ES.20501.141	chr2	-	3011	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	1035.32176813793	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACAAGAAAATTTTCGT	NA	False	NA	NA	False	AATAAA	-14	NA	156022112	155989171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156010912_156011079_156014747_156014943_156016016_156016129_156019255_156019306_156021096_156021161_156021806
ES.20501.143	chr2	-	3624	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	375	-8	intron_retention	FALSE	canonical	3	117	junction_14	884.213543123916	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGCCACAAGAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	156021125	155989176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016089_156019255_156019306_156020799_156020873_156021096
ES.20501.144	chr2	-	3099	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	1079.8297649767	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGCCACAAGAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	156022081	155989176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156009848_156010088_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.146	chr2	-	4329	18	NIC	ENSMUSG00000027620.17	novel	2744	18	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	13	junction_4	920.483726449001	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGCCACAAGAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	156022077	155989176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155994382_155994434_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.148	chr2	-	4420	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	-8	intron_retention	FALSE	canonical	2	5	junction_13	915.627653579773	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGCCACAAGAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	156022068	155989176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.15	chr2	-	12111	15	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	533	junction_13	599.064968709316	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022157	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156020873_156021096_156021161_156021806
ES.20501.151	chr2	-	3090	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	20	combination_of_known_splicesites	FALSE	canonical	3	6	junction_15	1026.13845431492	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGCAAATCCTACTTT	NA	False	NA	20	True	AATAAA	-35	NA	156022131	155989839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.152	chr2	-	3666	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	10	0	intron_retention	FALSE	canonical	3	533	junction_15	579.735146289881	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022148	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.153	chr2	-	8168	15	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	1358	junction_5	340.275406165089	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022113	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156021161_156021806
ES.20501.154	chr2	-	5352	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	244	junction_14	859.671603832525	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022107	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.155	chr2	-	3897	16	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	1358	junction_5	377.007303200703	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022155	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806
ES.20501.156	chr2	-	10709	16	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_13	888.208984417519	1555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022129	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156011683_156011888_156012402_156014747_156021161_156021806
ES.20501.157	chr2	-	6825	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	244	junction_14	772.98842771092	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022086	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156020873_156021096_156021161_156021806
ES.20501.159	chr2	-	7919	16	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	533	junction_14	611.335746996326	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022106	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156020873_156021096_156021161_156021806
ES.20501.16	chr2	-	3425	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	90	junction_16	964.944892240862	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022107	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.160	chr2	-	3825	16	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	1090	junction_5	428.496202498407	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022101	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806
ES.20501.161	chr2	-	3656	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	20	junction_14	928.802533011576	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022101	155989859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.162	chr2	-	2130	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-112	693	-41	-2	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022199	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.163	chr2	-	3726	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	-2	intron_retention	FALSE	canonical	3	21	junction_15	991.020600314097	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022101	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.164	chr2	-	2242	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	-135	703	-135	-2	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022293	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.165	chr2	-	2198	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	-80	2	-18	-2	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022176	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.166	chr2	-	2110	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	816.691426312992	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022107	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ES.20501.167	chr2	-	3671	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	-2	intron_retention	FALSE	canonical	3	117	junction_15	891.945721190574	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022101	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156020873_156021096_156021161_156021806
ES.20501.168	chr2	-	2374	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	965.519088941856	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022113	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156009848_156010088_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.169	chr2	-	2700	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	90	junction_16	976.041110814498	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022103	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.170	chr2	-	2168	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	978.406592310448	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022109	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.171	chr2	-	2227	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	935.369445727195	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022133	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.172	chr2	-	2113	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022109	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.175	chr2	-	2674	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	90	junction_15	762.364351766457	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022131	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.178	chr2	-	3645	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	11	-2	intron_retention	FALSE	canonical	3	533	junction_15	609.178336855268	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022147	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.18	chr2	-	2861	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	935.431822445893	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022100	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156021096_156021161_156021806
ES.20501.181	chr2	-	2174	18	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	816.1878303396	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022113	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016129_156019255_156019306_156021096_156021161_156021806
ES.20501.183	chr2	-	3925	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	-2	intron_retention	FALSE	canonical	3	117	junction_15	813.426692686563	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022113	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156021161_156021806
ES.20501.186	chr2	-	2450	20	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	1029.59358627984	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022106	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156016626_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.187	chr2	-	8138	15	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1090	junction_5	402.602103921021	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022103	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156021161_156021806
ES.20501.189	chr2	-	5350	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	11	junction_14	790.762841244927	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156021882	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016895_156019255_156020873_156021096_156021161_156021806
ES.20501.190	chr2	-	5364	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	244	junction_14	843.97438423549	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022103	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.193	chr2	-	2227	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	947.068276835231	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022151	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.194	chr2	-	6659	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	6	junction_14	924.859446910606	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022068	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.195	chr2	-	2305	19	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	963.664349446975	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022132	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.196	chr2	-	2954	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	930.02448527438	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022068	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019251_156019306_156021096_156021161_156021806
ES.20501.197	chr2	-	7029	16	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	244	junction_14	668.527722353797	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022068	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156021161_156021806
ES.20501.199	chr2	-	3928	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	117	junction_15	832.311605935541	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022134	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156021161_156021806
ES.20501.2	chr2	-	2919	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	-198	-10	-127	0	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022285	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.20	chr2	-	6097	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	244	junction_14	843.97438423549	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022133	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.200	chr2	-	2217	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	1015.96738283849	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022068	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.201	chr2	-	2120	4	ISM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	27757	2	12504	-2	3prime_fragment	FALSE	canonical	3	2412	junction_3	178.258862955597	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	155994339	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654
ES.20501.203	chr2	-	3771	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	5	junction_13	993.018685990673	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022107	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.204	chr2	-	2119	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	841.791120562245	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022115	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156021096_156021161_156021806
ES.20501.205	chr2	-	2451	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	968.948929396064	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022158	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.206	chr2	-	2197	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	1024.72452348447	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022066	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.207	chr2	-	2168	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	846.337082223983	1554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGTGCTCATTATC	NA	False	NA	-2	True	AATAAA	-13	NA	156022068	155989861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.208	chr2	-	2126	18	FSM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	-2	3	-2	-3	multi-exon	FALSE	canonical	3	117	junction_15	799.195928097666	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022106	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ES.20501.209	chr2	-	3033	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_15	1017.40442934616	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022079	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.21	chr2	-	4602	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-19	0	intron_retention	FALSE	canonical	3	1090	junction_5	428.496202498407	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022177	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156021161_156021806
ES.20501.210	chr2	-	3268	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	-3	intron_retention	FALSE	canonical	3	117	junction_14	860.592002725862	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022101	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.211	chr2	-	2895	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	815.120327797637	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022069	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156021096_156021161_156021806
ES.20501.212	chr2	-	3698	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	5	-3	intron_retention	FALSE	canonical	3	117	junction_15	877.107751032001	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022111	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156020873_156021096_156021161_156021806
ES.20501.213	chr2	-	6419	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	-3	intron_retention	FALSE	canonical	3	383	junction_14	751.791067114893	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022103	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.214	chr2	-	3762	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	-3	intron_retention	FALSE	canonical	1	2	junction_14	917.410244707037	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCAGTGTGCTCATTAT	NA	False	NA	-3	True	AATAAA	-12	NA	156022081	155989862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156010912_156011079_156014747_156014943_156019255_156020873_156021096_156021161_156021806
ES.20501.215	chr2	-	3747	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	21	junction_15	980.213823045201	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCAGTGTGCTCATTA	NA	False	NA	-4	True	AATAAA	-11	NA	156022106	155989863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.216	chr2	-	7157	16	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	244	junction_14	639.476730529649	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCAGTGTGCTCATTA	NA	False	NA	-4	True	AATAAA	-11	NA	156022180	155989863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156021161_156021806
ES.20501.217	chr2	-	2202	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	967.340928640064	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCAGTGTGCTCATTA	NA	False	NA	-4	True	AATAAA	-11	NA	156022127	155989863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.22	chr2	-	3634	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	815.120327797637	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022104	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156021096_156021161_156021806
ES.20501.220	chr2	-	2208	2	ISM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	29913	23	14660	-23	intron_retention	FALSE	canonical	3	2683	junction_1	0	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAATGTTAACAG	NA	False	NA	-23	True	NA	NA	NA	155992183	155989882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155990112_155990204
ES.20501.225	chr2	-	2937	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	-48	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	958.743190939492	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATACAACTCCTGTTA	NA	False	NA	-48	True	AATAAA	-21	NA	156022101	155989907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.227	chr2	-	7750	9	ISM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	2161	8776	-114	5113	intron_retention	FALSE	canonical	3	2279	junction_2	123.610211451158	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	156019935	155998635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747
ES.20501.228	chr2	-	7644	6	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-10	-151	intron_retention	FALSE	non_canonical	0	0	junction_1	870.423942685402	1456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTTTTTAAACATACTT	NA	False	NA	NA	False	NA	NA	NA	156022168	156009608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156011683_156011888_156012402_156014747_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.229	chr2	-	177	1	Intergenic	novelGene_16961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	3937	False	NA	NA	False	NA	NA	NA	156012819	156012642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156012600_156012800
ES.20501.23	chr2	-	2514	18	NNC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	702.479956984822	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022107	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806_156021840_156022066
ES.20501.230	chr2	-	7780	1	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	0	445	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAAAGAAAATAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	156022087	156014307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156014300_156022100
ES.20501.231	chr2	-	4816	4	NIC	ENSMUSG00000027620.17	novel	707	6	NA	NA	3	419	intron_retention	FALSE	canonical	3	6	junction_1	1095.65393968878	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156022101	156014333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156016895_156018322_156018378_156019255_156021161_156021806
ES.20501.232	chr2	-	986	4	ISM	ENSMUSG00000027620.17	ENSMUST00000146288.8	754	6	10	7608	0	419	5prime_fragment	FALSE	canonical	3	1623	junction_2	325.028545754916	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156022069	156014333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.233	chr2	-	7105	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	48	-6145	-3	419	multi-exon	FALSE	canonical	3	2349	junction_1	0	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156022084	156014333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156021161_156021806
ES.20501.234	chr2	-	1165	1	NIC	ENSMUSG00000027620.17	novel	707	6	NA	NA	707	-738	mono-exon	FALSE	NA	NA	NA	NA	NA	1351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACATTTAACTCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	156018596	156017431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156017400_156018600
ES.20501.235	chr2	-	3036	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	27	-2055	-1	657	multi-exon	FALSE	canonical	3	2349	junction_1	0	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACTTACTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	156022105	156018423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156021161_156021806
ES.20501.236	chr2	-	853	4	ISM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	-34	127	1	-127	5prime_fragment	FALSE	canonical	3	90	junction_1	977.365279150477	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTGTCTTGTATTTTC	NA	False	NA	NA	False	AGTAAA	-15	NA	156022103	156019407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.237	chr2	-	827	4	ISM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	-111	230	-22	-230	5prime_fragment	FALSE	canonical	3	90	junction_1	977.365279150477	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTTCTTGATGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	156022180	156019510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.238	chr2	-	706	4	ISM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	-101	341	-12	-341	5prime_fragment	FALSE	canonical	3	90	junction_1	977.365279150477	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCATAGAAATCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	156022170	156019621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.24	chr2	-	2898	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	947.068276835231	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022119	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.25	chr2	-	8818	15	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1090	junction_5	402.602103921021	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022080	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156021161_156021806
ES.20501.27	chr2	-	3012	19	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	965.191935431613	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022121	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156010912_156011079_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.28	chr2	-	4649	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_15	944.900741752649	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022079	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156021161_156021806
ES.20501.29	chr2	-	2871	18	FSM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	-43	-701	11	0	multi-exon	FALSE	canonical	3	117	junction_15	799.195928097666	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022147	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ES.20501.3	chr2	-	3008	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	-198	0	-198	0	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022356	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.31	chr2	-	3331	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	90	junction_15	781.091836308257	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022103	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.32	chr2	-	8879	15	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1358	junction_5	340.275406165089	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022123	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156021161_156021806
ES.20501.33	chr2	-	2801	18	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	972.268193168103	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022098	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992658_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156021096_156021161_156021806
ES.20501.34	chr2	-	2670	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	33	junction_14	685.156669837069	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022068	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156021096_156021161_156021806
ES.20501.36	chr2	-	4211	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-90	0	intron_retention	FALSE	canonical	3	12	junction_17	888.663753303794	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022248	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806_156021962_156022214
ES.20501.37	chr2	-	7305	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-127	0	intron_retention	FALSE	canonical	3	383	junction_14	751.791067114893	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022285	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.38	chr2	-	2841	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022134	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.4	chr2	-	2794	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	888.14876477632	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022101	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003872_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.41	chr2	-	3984	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_15	862.697897425409	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156021489	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021353
ES.20501.44	chr2	-	2927	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	935.369445727195	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022130	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.45	chr2	-	2921	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	985.03379806651	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022101	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020758_156020873_156021096_156021161_156021806
ES.20501.46	chr2	-	2742	18	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-134	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	680.234052942079	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022292	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806_156021850_156022051
ES.20501.47	chr2	-	3957	13	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-911	0	intron_retention	FALSE	canonical	3	1358	junction_5	366.365216992856	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	964	False	NA	NA	False	AATAAA	-27	NA	156015792	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747
ES.20501.48	chr2	-	3753	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_15	1026.13845431492	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022113	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.49	chr2	-	6540	1	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	11145	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1527	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	155995698	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155989200_155995700
ES.20501.51	chr2	-	4380	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	117	junction_15	877.107751032001	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022089	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156020873_156021096_156021161_156021806
ES.20501.52	chr2	-	3010	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	941.49426969926	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022036	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156016626_156016895_156019255_156019306_156021096_156021161_156021806
ES.20501.53	chr2	-	2877	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	978.406592310448	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022115	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.55	chr2	-	2887	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	816.691426312992	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022181	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ES.20501.58	chr2	-	2748	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	666.122733506184	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022106	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996212_156000331_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.59	chr2	-	2881	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_14	967.340928640064	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022101	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.6	chr2	-	2875	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	922.998804554955	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022096	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019306_156021096_156021161_156021806
ES.20501.60	chr2	-	2972	19	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	974.065485985236	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022114	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.62	chr2	-	2763	18	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	863.805329376257	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022068	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000331_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.64	chr2	-	4617	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_15	958.123995991908	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022065	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156021161_156021806
ES.20501.65	chr2	-	2841	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	991.50681874927	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022115	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156016016_156016089_156020799_156020873_156021096_156021161_156021806
ES.20501.66	chr2	-	5286	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6	junction_15	981.855725993726	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022134	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019255_156020873_156021096_156021161_156021806
ES.20501.68	chr2	-	3153	20	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1096.4302464446	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022091	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009503_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.7	chr2	-	2882	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	-61	-701	1	0	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022157	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.70	chr2	-	2945	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1027.64382910918	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022129	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009690_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.71	chr2	-	6041	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	244	junction_14	859.671603832525	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022095	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.72	chr2	-	4418	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	13	0	intron_retention	FALSE	canonical	3	117	junction_15	891.945721190574	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022145	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156020873_156021096_156021161_156021806
ES.20501.74	chr2	-	3574	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1090	junction_4	447.368553009956	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022068	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.75	chr2	-	3345	21	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	1124.69491307643	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022089	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156016016_156016129_156016626_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.76	chr2	-	4872	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	21	junction_14	888.563098841516	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022086	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156016089_156018322_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.78	chr2	-	4597	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	117	junction_15	832.311605935541	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022100	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156021161_156021806
ES.20501.79	chr2	-	6245	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_14	818.628309181737	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022113	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020796_156020873_156021096_156021161_156021806
ES.20501.8	chr2	-	7300	15	ISM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	1132	-701	528	0	intron_retention	FALSE	canonical	3	244	junction_14	661.760931615221	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156020972	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016
ES.20501.80	chr2	-	5938	17	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	198	junction_12	819.888673845419	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022068	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156016016_156019306_156021096_156021161_156021806
ES.20501.81	chr2	-	3159	20	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_16	1043.54398559021	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022106	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.83	chr2	-	3230	21	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1089.98736116526	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTTCGTTTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	156022119	155989164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014940_156016016_156016089_156016626_156016895_156018322_156018378_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ES.20501.87	chr2	-	4963	19	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_15	1030.6318046066	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022132	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156016626_156016895_156018322_156018378_156019255_156021161_156021806
ES.20501.88	chr2	-	3428	20	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	21	junction_15	1048.61778697383	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022080	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156018322_156018378_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.89	chr2	-	2732	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	690.378111979226	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022102	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990097_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20501.9	chr2	-	8638	16	NIC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	533	junction_14	578.82994624213	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022106	155989158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156020873_156021096_156021161_156021806
ES.20501.90	chr2	-	2923	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_15	901.852264050404	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022068	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156019671_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.92	chr2	-	3342	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	90	junction_15	878.522406872564	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022106	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.93	chr2	-	3081	19	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	901.975967008949	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022107	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ES.20501.95	chr2	-	2692	16	NIC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	33	junction_14	711.994269639862	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022115	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156021096_156021161_156021806
ES.20501.98	chr2	-	3682	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_15	924.796867919426	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022104	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016895_156018322_156018378_156019255_156019306_156021096_156021161_156021806
ES.20501.99	chr2	-	2722	17	NNC	ENSMUSG00000027620.17	novel	2711	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	869.455576783541	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022107	155989165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_155990112_155990210_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000392_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ES.20502.1	chr2	-	172	1	Intergenic	novelGene_16963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACATAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	156030208	156030036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156030000_156030200
ES.20503.1	chr2	+	5853	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	-15	-101	-15	101	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGTTCCAAGTGCTG	NA	False	NA	110	True	NA	NA	NA	156038546	156151973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.10	chr2	+	2940	16	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	67	6660	-25	-1400	5prime_fragment	FALSE	canonical	3	289	junction_1	23.1714383575029	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTTGGTTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	156038628	156145212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702
ES.20503.11	chr2	+	3421	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-25	-2161	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTTGCAGTTTATTTA	NA	False	NA	NA	False	AATAAA	-25	NA	156038628	156149708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.12	chr2	+	5569	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-23	16	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	86.0196198550075	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGTATAAAAGGTTGT	NA	False	NA	25	True	AATAAA	-34	NA	156038630	156151888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.13	chr2	+	3412	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-18	-2168	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	86.4598669542696	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAATTCGATTTGCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	156038635	156149701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.14	chr2	+	5495	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	88.408797953346	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTGTCAGTCACATTA	NA	False	NA	6	True	AATAAA	-15	NA	156038635	156151869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.15	chr2	+	5577	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038636	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.17	chr2	+	5019	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-13	-616	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	81.7586540291027	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTTTCTTTTTATGT	NA	False	NA	1	True	AATAAA	-12	NA	156038640	156151253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.18	chr2	+	5871	17	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-13	-613	intron_retention	FALSE	canonical	3	16	junction_5	84.2522023080109	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTCTTTTTATGTAAC	NA	False	NA	4	True	AATAAA	-15	NA	156038640	156151256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.19	chr2	+	5652	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	84.4048572701586	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGTCAGTCACATT	NA	False	NA	5	True	AATAAA	-14	NA	156038641	156151868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145104_156146555_156146735_156149213
ES.20503.2	chr2	+	7099	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	289	junction_1	29.5361172502789	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038566	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.20	chr2	+	3473	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-12	-2161	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	81.7586540291027	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTTGCAGTTTATTTA	NA	False	NA	NA	False	AATAAA	-25	NA	156038641	156149708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.21	chr2	+	5543	17	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	109.742027045248	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGTCAGTCACATT	NA	False	NA	5	True	AATAAA	-14	NA	156038646	156151868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.22	chr2	+	3232	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	87	2418	-5	-2415	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGACTGACTTCAGGGA	NA	False	NA	NA	False	AATAAA	-23	NA	156038648	156149454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.24	chr2	+	1759	11	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	89	17397	-3	27	5prime_fragment	FALSE	canonical	3	289	junction_1	26.5510828404417	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTGGTATTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	156038650	156134475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
ES.20503.25	chr2	+	4946	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-2	-613	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTCTTTTTATGTAAC	NA	False	NA	4	True	AATAAA	-15	NA	156038651	156151256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.27	chr2	+	5706	19	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	111.057278625953	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038654	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156076780_156076842_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.28	chr2	+	4883	19	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	3	-615	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	83.1791165623846	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTTTCTTTTTATGTA	NA	False	NA	2	True	AATAAA	-13	NA	156038656	156151254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156144897_156145037_156145100_156146550_156146735_156149213
ES.20503.29	chr2	+	4356	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	83.4688678676918	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCAGTCACATTACT	NA	False	NA	8	True	AATAAA	-17	NA	156038658	156151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156150496
ES.20503.3	chr2	+	4440	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	11	1286	11	-1283	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCACAGATTCATTATCA	NA	False	NA	NA	False	NA	NA	NA	156038572	156150586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.30	chr2	+	3097	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	6	846	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	83.2436287658329	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGACCAAATTTGTAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	156038659	156147458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156147341
ES.20503.32	chr2	+	4599	12	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	102.854547061565	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTGTCAGTCACATTA	NA	False	NA	6	True	AATAAA	-15	NA	156038660	156151869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.33	chr2	+	1769	11	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	8	-3780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	104.087655367964	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCATCTGAGATTGTAA	NA	False	NA	NA	False	NA	NA	NA	156038661	156130668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156130557
ES.20503.34	chr2	+	5557	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	86.4598669542696	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038661	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.36	chr2	+	5777	20	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.794410840596	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCAGTCACATTACT	NA	False	NA	8	True	AATAAA	-17	NA	156038663	156151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156089645_156089746_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118220_156118264_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.37	chr2	+	5166	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-10	-1315	intron_retention	FALSE	canonical	3	289	junction_1	28.6715642013128	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGGTAAACTTTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	156038663	156150554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.38	chr2	+	1721	7	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	103	36583	-9	745	5prime_fragment	FALSE	canonical	3	289	junction_1	28.2277444291172	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156038664	156115289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461
ES.20503.4	chr2	+	5702	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	81.7586540291027	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038577	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.42	chr2	+	6668	17	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-4	1	intron_retention	FALSE	canonical	1	1	junction_11	87.9211294285964	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038669	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156135688_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.43	chr2	+	1720	11	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-4	27	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	98.1965376171686	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTGGTATTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	156038669	156134475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
ES.20503.44	chr2	+	5482	19	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	83.1791165623846	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTGTCAGTCACATTA	NA	False	NA	6	True	AATAAA	-15	NA	156038672	156151869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156144897_156145037_156145100_156146550_156146735_156149213
ES.20503.45	chr2	+	4815	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	-2174	intron_retention	FALSE	canonical	3	289	junction_1	29.5361172502789	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTGTAAATTCGATT	NA	False	NA	NA	False	AATAAA	-12	NA	156038673	156149695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.46	chr2	+	1622	10	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	98.616478727154	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	ACTAAA	-36	NA	156038673	156134446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
ES.20503.47	chr2	+	3525	19	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	-2197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.905309405461	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAACCTAGT	NA	False	NA	NA	False	GATAAA	-14	NA	156038673	156149672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156089645_156089746_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.48	chr2	+	4819	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	112	806	0	-803	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGTGTGAGGTATGAT	NA	False	NA	NA	False	AAGAAA	-17	NA	156038673	156151066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.49	chr2	+	5667	19	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	130.724819353716	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTGTCAGTCACATTA	NA	False	NA	6	True	AATAAA	-15	NA	156038673	156151869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156135646_156135688_156136016_156136200_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.5	chr2	+	5104	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	17	616	17	-613	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTCTTTTTATGTAAC	NA	False	NA	4	True	AATAAA	-15	NA	156038578	156151256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.50	chr2	+	4901	17	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	-616	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	109.742027045248	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTTTCTTTTTATGT	NA	False	NA	1	True	AATAAA	-12	NA	156038673	156151253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.51	chr2	+	5835	21	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.555177259749	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038677	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156075977_156076062_156076208_156076277_156076780_156076842_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.53	chr2	+	5454	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	87.9211294285964	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038679	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.55	chr2	+	5152	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	85.906046870339	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038679	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.57	chr2	+	6138	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	4	1	intron_retention	FALSE	canonical	3	289	junction_1	28.783404506764	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038679	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.58	chr2	+	3332	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	8	-2165	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	86.0196198550075	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCGATTTGCAGTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	156038683	156149704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.59	chr2	+	5290	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	17	-614	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	84.0147869667343	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTTCTTTTTATGTAA	NA	False	NA	3	True	AATAAA	-14	NA	156038692	156151255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156039019_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.6	chr2	+	3075	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	30	-2161	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	85.906046870339	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTTGCAGTTTATTTA	NA	False	NA	NA	False	AATAAA	-25	NA	156038591	156149708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.60	chr2	+	5905	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	84.0147869667343	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGTCAGTCACATTAC	NA	False	NA	7	True	AATAAA	-16	NA	156038692	156151870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156039019_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.61	chr2	+	5586	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	84.9801116565672	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038692	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140460_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.62	chr2	+	1551	9	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	17	26	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	107.282337782134	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCCTGGTATTTTCCA	NA	False	NA	NA	False	NA	NA	NA	156038692	156134474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385
ES.20503.63	chr2	+	5882	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	110.903649070545	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCAGTCACATTACT	NA	False	NA	8	True	AATAAA	-17	NA	156038696	156151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156039019_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.64	chr2	+	5234	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	21	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	91.063689556022	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	False	NA	10	True	AATAAA	-19	NA	156038696	156151873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.65	chr2	+	2235	1	Intergenic	novelGene_16964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTCAGATACACCAGA	NA	False	NA	NA	False	NA	NA	NA	156040780	156043015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156040800_156043000
ES.20503.66	chr2	+	183	1	Intergenic	novelGene_16965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156047944	156048127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156047900_156048100
ES.20503.67	chr2	+	153	1	Intergenic	novelGene_16967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	156062208	156062361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156062200_156062400
ES.20503.68	chr2	+	5583	17	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	26691	0	453	0	3prime_fragment	FALSE	canonical	3	304	junction_9	25.2387815424992	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	21	True	NA	9	True	AATAAA	-18	NA	156065252	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.69	chr2	+	4492	15	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	453	-620	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	88.5102611369473	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGGTTTTTCTTTTT	21	True	NA	-3	True	AATAAA	-8	NA	156065252	156151249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156065370_156093695_156093868_156096145_156096231_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.7	chr2	+	3545	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	31	2161	31	-2158	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCAGTTTATTTAATT	NA	False	NA	NA	False	AATAAA	-28	NA	156038592	156149711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.70	chr2	+	1715	10	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	453	-3780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.601297640331	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCATCTGAGATTGTAA	21	True	NA	NA	False	NA	NA	NA	156065252	156130668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156130557
ES.20503.72	chr2	+	8185	15	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	-11334	0	intron_retention	FALSE	canonical	3	304	junction_7	26.9327393515697	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156093770	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156093868_156096145_156096231_156106200_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.73	chr2	+	4825	13	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	4201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	98.6406215624284	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156109305	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135406_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.75	chr2	+	2952	12	Fusion	ENSMUSG00000038116.17_ENSMUSG00000038085.14	novel	5737	18	NA	NA	-6080	-4044	multi-exon	FALSE	canonical	0	0	junction_9	151.996574559054	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156118470	156176541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156161929_156161984_156170237_156170376_156175498
ES.20503.76	chr2	+	4177	1	Intergenic	novelGene_16972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGCCATCTCTTATGGG	NA	False	NA	NA	False	NA	NA	NA	156118589	156122766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156118600_156122800
ES.20503.77	chr2	+	1040	6	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	91367	11006	5378	255	internal_fragment	FALSE	canonical	3	304	junction_1	19.9459269025032	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAGTTGACTTATTGA	NA	False	NA	NA	False	AATAAA	-11	NA	156129928	156140866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440
ES.20503.78	chr2	+	6520	9	NNC	ENSMUSG00000038116.17	novel	703	3	NA	NA	-4925	-2426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.281147551129	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCACGTGACACTGACT	NA	False	NA	NA	False	AATAAA	-12	NA	156130739	156149443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156131966_156132006_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156141340_156144040_156145100_156146550_156146735_156149213
ES.20503.79	chr2	+	7334	8	Fusion	ENSMUSG00000038116.17_ENSMUSG00000038085.14	novel	5737	18	NA	NA	-207	3744	intron_retention	FALSE	canonical	0	0	junction_7	128.153606811418	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCTTTTTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	156135457	156155616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213_156152022_156152187
ES.20503.8	chr2	+	5139	15	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	91.5321957408586	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038606	156151872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ES.20503.80	chr2	+	3778	6	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	497	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	143.312246510897	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCAGTCACATTACT	NA	False	NA	8	True	AATAAA	-17	NA	156136161	156151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149004
ES.20503.81	chr2	+	7437	2	ISM	ENSMUSG00000038116.17	ENSMUST00000122814.2	903	5	4656	-5256	4656	-1	3prime_fragment	FALSE	canonical	3	381	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGTCAGTCACATT	NA	False	NA	5	True	AATAAA	-14	NA	156142980	156151868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156145100_156146550
ES.20503.82	chr2	+	2043	1	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	10888	-614	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTTCTTTTTATGTAA	4988	False	NA	3	True	AATAAA	-14	NA	156149212	156151255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156149200_156151300
ES.20503.83	chr2	+	2000	14	NNC	ENSMUSG00000038085.14	novel	2277	13	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.87819798982611	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTCTCTGTTCTCTGTG	NA	False	NA	3	True	AATAAA	-13	NA	156154525	156217556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156175814_156175937_156177262_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
ES.20503.84	chr2	+	1960	13	FSM	ENSMUSG00000038085.14	ENSMUST00000037096.9	2277	13	318	-1	0	1	multi-exon	FALSE	canonical	1	1	junction_9	2.37463447479583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTCTCTGTTCTCTGTG	NA	False	NA	3	True	AATAAA	-13	NA	156154536	156217556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177169_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
ES.20503.85	chr2	+	176	1	Intergenic	novelGene_16973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAATAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	156162850	156163026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156162800_156163000
ES.20503.86	chr2	+	179	1	Intergenic	novelGene_16975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGCATAGGTATAATT	9173	False	NA	NA	False	NA	NA	NA	156211644	156211823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156211600_156211800
ES.20503.9	chr2	+	642	5	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	55	45503	-37	-8175	5prime_fragment	FALSE	canonical	3	289	junction_1	34.1933838629639	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAAGTCTTTATTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	156038616	156106369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200
ES.20504.1	chr2	-	1217	2	Antisense	novelGene_ENSMUSG00000038116.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	156038919	156035996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_156036307_156038012
ES.20505.1	chr2	-	193	1	Intergenic	novelGene_16966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACCTTGCAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	156058644	156058451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156058500_156058600
ES.20506.1	chr2	-	173	1	Intergenic	novelGene_16968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTAGGTGCTGAC	NA	False	NA	NA	False	NA	NA	NA	156091761	156091588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156091600_156091800
ES.20507.1	chr2	-	4861	1	Intergenic	novelGene_16969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAAGTC	9989	False	NA	NA	False	NA	NA	NA	156101970	156097109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156097100_156102000
ES.20508.1	chr2	-	207	1	Intergenic	novelGene_16970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGGCAGGTGTCCTTAC	1663	False	NA	NA	False	NA	NA	NA	156110296	156110089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156110100_156110300
ES.20509.1	chr2	-	180	1	Intergenic	novelGene_16971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	156118176	156117996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156118000_156118200
ES.2051.1	chr1	-	207	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAAATTTGGAAAGTTA	NA	False	NA	NA	False	AAAAAG	-4	NA	180627420	180627213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180627200_180627400
ES.2051.10	chr1	-	1131	5	NIC	ENSMUSG00000060743.13	novel	724	5	NA	NA	-14	129	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1320.22772656841	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCTTCTGGTCTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	180641126	180630132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180630771_180637681_180637836_180639363_180639515_180640254_180640352_180641035
ES.2051.11	chr1	-	918	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	33	1890	4	-25	multi-exon	FALSE	canonical	3	2337	junction_3	156.5907617539	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATGGTGTTTGTAGCA	NA	False	NA	NA	False	AGTAAA	-17	NA	180641164	180630286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
ES.2051.14	chr1	-	791	3	FSM	ENSMUSG00000060743.13	ENSMUST00000159441.8	807	3	47	-31	-9	31	multi-exon	FALSE	canonical	3	2337	junction_2	191	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAATCCTAATTGGTT	NA	False	NA	NA	False	NA	NA	NA	180641121	180637281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180637836_180639363_180639515_180641035
ES.2051.2	chr1	-	4679	2	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAAATTTGGAAAGTTA	NA	False	NA	NA	False	AAAAAG	-4	NA	180637053	180627213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180627329_180632489
ES.2051.3	chr1	-	2880	5	NNC	ENSMUSG00000060743.13	novel	724	5	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	1268.46055811759	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGAGCCTCTTTTT	NA	False	NA	-2	True	AATAAA	-13	NA	180641126	180628400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180630771_180631082_180631197_180637681_180637836_180639363_180639515_180641035
ES.2051.4	chr1	-	2708	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	105	28	7	-28	multi-exon	TRUE	canonical	3	2337	junction_3	156.5907617539	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAAAAGTACCAA	NA	False	NA	-26	True	NA	NA	NA	180641092	180628424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
ES.2051.5	chr1	-	1092	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	16	1733	-13	132	multi-exon	FALSE	canonical	3	2337	junction_3	156.5907617539	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180641181	180630129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
ES.2051.6	chr1	-	5042	1	NIC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	5928	132	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTCTGGTCTTTATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	180635171	180630129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180630100_180635200
ES.2051.8	chr1	-	2084	4	NNC	ENSMUSG00000060743.13	novel	2841	4	NA	NA	3	130	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1201.87141112886	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTTCTGGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	180641165	180630131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180631457_180637357_180637836_180639363_180639515_180641035
ES.20510.1	chr2	-	8765	2	Antisense	novelGene_ENSMUSG00000038116.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	3957	False	NA	NA	False	NA	NA	NA	156150337	156141338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_156142115_156142348
ES.20511.1	chr2	-	851	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	-49	1	-49	-1	multi-exon	FALSE	canonical	3	384	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCTGTGTCTTGCGT	NA	False	NA	-5	True	AATAAA	-22	NA	156154716	156153766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156154323_156154421
ES.20511.2	chr2	-	682	1	NIC	ENSMUSG00000046229.11	novel	803	2	NA	NA	219	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCTGTGTCTTGCGT	NA	False	NA	-5	True	AATAAA	-22	NA	156154448	156153766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156153800_156154400
ES.20512.1	chr2	-	177	1	Intergenic	novelGene_16974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAAGGCTTAACTTAC	7684	False	NA	NA	False	NA	NA	NA	156172552	156172375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156172400_156172600
ES.20513.1	chr2	+	935	1	Antisense	novelGene_ENSMUSG00000102869.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-44	NA	156232499	156233434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156232500_156233400
ES.20514.1	chr2	-	4984	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	-65	-4	-65	4	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGTCTCTACTGCTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	156234964	156229980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156230000_156235000
ES.20514.2	chr2	-	4729	2	Genic_Genomic	ENSMUSG00000102869.3	novel	4915	1	NA	NA	20	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGGGCGTCTCTAC	NA	False	NA	NA	False	AATAAA	-14	NA	156234879	156229987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_156234699_156234861
ES.20514.3	chr2	-	2999	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	29	1887	29	-1887	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTGTGCATCTTACTT	NA	False	NA	NA	False	AATACA	-19	NA	156234870	156231871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156231900_156234900
ES.20514.4	chr2	-	2853	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	20	2042	20	-2042	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATGGTGAAGTGTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	156234879	156232026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156232000_156234900
ES.20514.5	chr2	-	1241	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192590.2	339	1	-125	-777	25	777	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTACTGTGGTCCGTGAG	NA	False	NA	NA	False	NA	NA	NA	156234874	156233633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156233600_156234900
ES.20515.1	chr2	-	158	1	Intergenic	novelGene_16976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	156253822	156253664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156253700_156253800
ES.20516.1	chr2	+	3816	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	-1874	863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1725431347937	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	5767	False	NA	28	True	AATAAA	-38	NA	156260954	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156261073_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.10	chr2	+	5944	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-330	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	32.8495505375879	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7311	False	NA	13	True	AATAAA	-28	NA	156262498	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.11	chr2	+	3556	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-325	845	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	32.8495505375879	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACATTTCCAAGTTATA	7316	False	NA	10	True	AATAAA	-20	NA	156262503	156382751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.12	chr2	+	6051	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-323	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2440149467844	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	7318	False	NA	11	True	AATAAA	-26	NA	156262505	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262709_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.13	chr2	+	3935	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-255	862	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	7386	False	NA	27	True	AATAAA	-37	NA	156262573	156382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.14	chr2	+	6707	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-456	0	-253	0	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7388	False	NA	13	True	AATAAA	-28	NA	156262575	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.16	chr2	+	3575	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-233	864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.4527570344801	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	7408	False	NA	29	True	AATAAA	-39	NA	156262595	156382770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262709_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.17	chr2	+	3563	22	NNC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	-202	862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.2942934240049	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	7439	False	NA	27	True	AATAAA	-37	NA	156262626	156382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262709_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.18	chr2	+	3915	22	NIC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	-200	864	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	46.1339860753633	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	7441	False	NA	29	True	AATAAA	-39	NA	156262628	156382770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.19	chr2	+	3801	20	NIC	ENSMUSG00000027624.21	novel	6249	22	NA	NA	-183	849	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.4964233818547	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	7458	False	NA	14	True	AATAAA	-24	NA	156262645	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.2	chr2	+	3734	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-550	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.0768011510082	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	7091	False	NA	14	True	AATAAA	-24	NA	156262278	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262506_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.20	chr2	+	6548	24	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.9239820600244	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7465	False	NA	13	True	AATAAA	-28	NA	156262652	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262709_156263024_156263220_156280504_156280554_156325384_156325619_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.21	chr2	+	8494	20	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-53	1	intron_retention	FALSE	canonical	3	98	junction_12	21.1301205500545	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGACTCCCTCAGCCT	7588	False	NA	12	True	AATAAA	-27	NA	156262775	156385133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.25	chr2	+	5971	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-31	33	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCCTCTCCTCTCT	7749	False	NA	46	True	NA	NA	NA	156262936	156385167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.26	chr2	+	3969	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-83	2365	-19	863	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7761	False	NA	28	True	AATAAA	-38	NA	156262948	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.27	chr2	+	3466	20	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-13	864	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	45.7900181455834	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	7767	False	NA	29	True	AATAAA	-39	NA	156262954	156382770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337782_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.28	chr2	+	6364	23	FSM	ENSMUSG00000027624.21	ENSMUST00000103137.10	6490	23	126	0	-13	0	multi-exon	FALSE	canonical	3	15	junction_13	45.7648724866464	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7767	False	NA	13	True	AATAAA	-28	NA	156262954	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.29	chr2	+	3481	21	NNC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	-7	840	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	35.4111564340957	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGCTGACATTTCCAAG	7773	False	NA	5	True	AATAAA	-15	NA	156262960	156382746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352697_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.3	chr2	+	3623	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-364	861	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	49.6498483181623	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTACCTGACTGTGAT	7277	False	NA	26	True	AATAAA	-36	NA	156262464	156382767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.30	chr2	+	5947	22	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	40.1842694372323	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	7774	False	NA	11	True	AATAAA	-26	NA	156262961	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.32	chr2	+	5885	21	NIC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	7776	False	NA	11	True	AATAAA	-26	NA	156262963	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.33	chr2	+	4260	24	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-4	843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.9239820600244	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGACATTTCCAAGTTA	7776	False	NA	8	True	AATAAA	-18	NA	156262963	156382749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156280504_156280554_156325384_156325619_156327914_156328007_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.34	chr2	+	3516	21	NIC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	-2	859	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAATTACCTGACTGTG	7778	False	NA	24	True	AATAAA	-34	NA	156262965	156382765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.35	chr2	+	3928	22	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-2	863	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	39.9894543921899	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7778	False	NA	28	True	AATAAA	-38	NA	156262965	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.36	chr2	+	3602	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-2	843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.3922153587656	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGACATTTCCAAGTTA	7778	False	NA	8	True	AATAAA	-18	NA	156262965	156382749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156342108_156342187_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.38	chr2	+	3618	13	ISM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-55	30470	5	-1414	5prime_fragment	FALSE	canonical	3	98	junction_12	17.0739811799514	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTCAAGCCCTGGGCAA	7789	False	NA	NA	False	NA	NA	NA	156262976	156354664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652
ES.20516.39	chr2	+	6286	22	NNC	ENSMUSG00000027624.21	novel	6249	22	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.172878600348	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	7790	False	NA	9	True	AATAAA	-24	NA	156262977	156385130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366802_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.4	chr2	+	4012	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-364	854	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	40.5360771871059	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTTATAATTACCTGA	7277	False	NA	19	True	AATAAA	-29	NA	156262464	156382760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.41	chr2	+	3837	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	8	849	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	43.5299896623006	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	7792	False	NA	14	True	AATAAA	-24	NA	156262979	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.42	chr2	+	3878	22	NNC	ENSMUSG00000027624.21	novel	6249	22	NA	NA	9	844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.0187423485912	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACATTTCCAAGTTAT	7793	False	NA	9	True	AATAAA	-19	NA	156262980	156382750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375703_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.43	chr2	+	3955	23	FSM	ENSMUSG00000027624.21	ENSMUST00000103137.10	6490	23	152	2383	9	845	multi-exon	FALSE	canonical	3	15	junction_13	45.7648724866464	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACATTTCCAAGTTATA	7793	False	NA	10	True	AATAAA	-20	NA	156262980	156382751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.45	chr2	+	3490	21	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	13	841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.406779011935	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCTGACATTTCCAAGT	7797	False	NA	6	True	AATAAA	-16	NA	156262984	156382747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263220_156280504_156280554_156335823_156336002_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.47	chr2	+	5828	20	NIC	ENSMUSG00000027624.21	novel	6249	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.4964233818547	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	7808	False	NA	11	True	AATAAA	-26	NA	156262995	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.49	chr2	+	5224	17	NIC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.6239380921987	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	7853	False	NA	9	True	AATAAA	-24	NA	156263040	156385130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.5	chr2	+	3487	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-363	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.4527570344801	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	7278	False	NA	14	True	AATAAA	-24	NA	156262465	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262506_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.50	chr2	+	3355	21	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	26	863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7623754803844	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7870	False	NA	28	True	AATAAA	-38	NA	156263057	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156263123_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.51	chr2	+	3807	23	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	91	863	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	49.7758612545917	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7935	False	NA	28	True	AATAAA	-38	NA	156263122	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.52	chr2	+	6060	24	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	10471	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.1010814553184	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGGACTCCCTCAGC	NA	False	NA	10	True	AATAAA	-25	NA	156273502	156385131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156273549_156280504_156280554_156325384_156325619_156327914_156328007_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.53	chr2	+	8085	20	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	10481	0	intron_retention	FALSE	canonical	1	1	junction_1	36.2877084414753	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	NA	False	NA	11	True	AATAAA	-26	NA	156273512	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156273549_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.54	chr2	+	3837	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	10605	848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0122589707714	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTCCAAGTTATAATT	NA	False	NA	13	True	AATAAA	-23	NA	156273636	156382754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156274142_156274957_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.55	chr2	+	3334	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11052	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7623754803844	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	NA	False	NA	14	True	AATAAA	-24	NA	156274083	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156274142_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.57	chr2	+	3371	21	NNC	ENSMUSG00000027624.21	novel	640	5	NA	NA	11854	839	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.5190078851889	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCAGCTGACATTTCCAA	NA	False	NA	4	True	AATAAA	-14	NA	156274885	156382745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.59	chr2	+	5831	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11857	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7623754803844	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	NA	False	NA	9	True	AATAAA	-24	NA	156274888	156385130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280450_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.6	chr2	+	3645	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-361	862	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	45.5325920868641	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	7280	False	NA	27	True	AATAAA	-37	NA	156262467	156382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.60	chr2	+	5775	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11861	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.6114191905073	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	NA	False	NA	11	True	AATAAA	-26	NA	156274892	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.61	chr2	+	3407	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11865	862	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.6114191905073	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	NA	False	NA	27	True	AATAAA	-37	NA	156274896	156382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.62	chr2	+	5742	21	NNC	ENSMUSG00000027624.21	novel	640	5	NA	NA	11870	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.5190078851889	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	NA	False	NA	11	True	AATAAA	-26	NA	156274901	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.63	chr2	+	3791	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11885	861	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	47.2836282089122	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTACCTGACTGTGAT	NA	False	NA	26	True	AATAAA	-36	NA	156274916	156382767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.64	chr2	+	3443	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11885	864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7623754803844	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	NA	False	NA	29	True	AATAAA	-39	NA	156274916	156382770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280450_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.66	chr2	+	5708	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11886	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	43.0122589707714	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	NA	False	NA	13	True	AATAAA	-28	NA	156274917	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729_156382304_156382347
ES.20516.67	chr2	+	5785	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11887	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	46.7369732781426	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGACTCCCTCAGCC	NA	False	NA	11	True	AATAAA	-26	NA	156274918	156385132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.68	chr2	+	3821	23	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11897	864	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	50.8383436992458	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCTGACTGTGATTGA	NA	False	NA	29	True	AATAAA	-39	NA	156274928	156382770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.69	chr2	+	3871	22	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	17208	862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1725431347937	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACCTGACTGTGATT	NA	False	NA	27	True	AATAAA	-37	NA	156280239	156382768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156280414_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.7	chr2	+	3522	22	NNC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	-360	863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2440149467844	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACCTGACTGTGATTG	7281	False	NA	28	True	AATAAA	-38	NA	156262468	156382769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262506_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.70	chr2	+	3708	22	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	17472	849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.2102380511433	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCCAAGTTATAATTA	NA	False	NA	14	True	AATAAA	-24	NA	156280503	156382755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156280554_156335823_156336015_156336876_156337042_156337782_156337885_156338405_156338449_156341506_156341578_156345569_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.71	chr2	+	6127	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	22497	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.188544895708	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCATGGACTCCCTCAG	NA	False	NA	9	True	AATAAA	-24	NA	156285528	156385130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156285646_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.72	chr2	+	4016	2	Antisense	novelGene_ENSMUSG00000086872.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156285700	156289884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156286398_156286565
ES.20516.73	chr2	+	220	1	Intergenic	novelGene_16978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATATTTACTTGTGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	156291179	156291399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156291200_156291400
ES.20516.74	chr2	+	1527	1	Intergenic	novelGene_16979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAACAAA	18	False	NA	NA	False	NA	NA	NA	156311777	156313304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156311800_156313300
ES.20516.75	chr2	+	3592	21	NNC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	5	860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.3192557576123	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTACCTGACTGTGA	4851	False	NA	25	True	AATAAA	-35	NA	156317458	156382766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156317665_156317754_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.76	chr2	+	3676	20	NIC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	19	844	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	36.3078557313928	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACATTTCCAAGTTAT	4865	False	NA	9	True	AATAAA	-19	NA	156317472	156382750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.77	chr2	+	4085	21	NIC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	21	847	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	44.0489500442406	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTCCAAGTTATAAT	4867	False	NA	12	True	AATAAA	-22	NA	156317474	156382753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.78	chr2	+	6574	22	NNC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.5276018504029	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	4993	False	NA	13	True	AATAAA	-28	NA	156317600	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156317927_156325384_156325619_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.79	chr2	+	3832	21	NIC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	242	839	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	48.9923208268398	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCAGCTGACATTTCCAA	5088	False	NA	4	True	AATAAA	-14	NA	156317695	156382745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.8	chr2	+	5969	23	NNC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-343	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	49.6498483181623	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7298	False	NA	13	True	AATAAA	-28	NA	156262485	156385134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156262593_156263024_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.80	chr2	+	2346	11	ISM	ENSMUSG00000027624.21	ENSMUST00000029155.16	6521	22	35197	2390	4337	836	3prime_fragment	FALSE	canonical	3	15	junction_1	62.0954104584228	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGCAGCTGACATTTC	NA	False	NA	1	True	AATAAA	-11	NA	156352650	156382742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.81	chr2	+	5183	1	NIC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	12477	9895	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	156360790	156365973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156360800_156366000
ES.20516.82	chr2	+	2853	7	ISM	ENSMUSG00000027624.21	ENSMUST00000029155.16	6521	22	50078	2382	-7895	844	3prime_fragment	FALSE	canonical	3	127	junction_3	15.8893745069534	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACATTTCCAAGTTAT	NA	False	NA	9	True	AATAAA	-19	NA	156367531	156382750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20516.9	chr2	+	4018	22	NIC	ENSMUSG00000027624.21	novel	6490	23	NA	NA	-331	857	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	45.3948662025897	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	7310	False	NA	22	True	AATAAA	-32	NA	156262497	156382763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ES.20517.1	chr2	-	179	1	Intergenic	novelGene_16977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTCTTTCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	156283085	156282906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156282900_156283100
ES.20518.1	chr2	-	2156	1	Intergenic	novelGene_16980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAATATTCCAACCAGG	NA	False	NA	NA	False	NA	NA	NA	156374101	156371945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156371900_156374100
ES.20519.1	chr2	+	2658	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	-43	812	-31	4	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTGAGTCTCTTAC	NA	False	NA	11	True	ATTAAA	-22	NA	156389472	156410080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
ES.20519.2	chr2	+	2801	5	NIC	ENSMUSG00000027628.11	novel	2766	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	64.3481740222673	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389501	156410076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156389804_156391771_156391948_156392568_156393370_156397746_156397977_156408784
ES.20519.3	chr2	+	2754	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	12	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389515	156410076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
ES.20519.4	chr2	+	2552	4	NNC	ENSMUSG00000027628.11	novel	3427	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9338276816742	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389515	156410076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156389804_156392627_156393370_156397746_156397977_156408784
ES.20519.5	chr2	+	2319	3	ISM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	3064	5	3024	-5	3prime_fragment	FALSE	canonical	3	133	junction_2	0.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAATCCCCCTGTGTGA	NA	False	NA	2	True	ATTAAA	-13	NA	156392567	156410071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156393370_156397746_156397977_156408784
ES.2052.1	chr1	+	1111	1	FSM	ENSMUSG00000073485.4	ENSMUST00000097448.3	2905	1	194	1600	194	-1600	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGCTGTTACATATCA	190	False	NA	NA	False	ACTAAA	-23	NA	180641542	180642653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180641500_180642700
ES.20520.1	chr2	+	3480	2	Genic_Genomic	ENSMUSG00000055494.6	novel	2197	2	NA	NA	2138	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACCTCATTTGTAAGC	NA	False	NA	NA	False	NA	NA	NA	156415849	156419375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_156416838_156416883
ES.20521.1	chr2	+	3677	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-229	1403	-229	5	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	NA	False	NA	16	True	ATTAAA	-19	NA	156455395	156604880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.10	chr2	+	3522	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29671	-2	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCTAGAACCTTTTC	9370	False	NA	NA	False	NA	NA	NA	156485295	156605042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.11	chr2	+	3455	14	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29672	2	intron_retention	FALSE	canonical	1	1	junction_2	158.923002457351	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGTTTCTCACCCTT	9371	False	NA	13	True	ATTAAA	-16	NA	156485296	156604877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156485362_156506718_156506904_156509915_156510015_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.12	chr2	+	160	1	Intergenic	novelGene_16982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAATAAATAAA	9710	False	NA	NA	False	NA	NA	NA	156485635	156485795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156485600_156485800
ES.20521.13	chr2	+	3119	2	Intergenic	novelGene_16983	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGCTCCAAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	156486411	156489574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156487665_156487708
ES.20521.14	chr2	+	3523	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	30908	-32	intron_retention	FALSE	canonical	1	1	junction_1	159.056309910114	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	156486532	156605012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156486630_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.15	chr2	+	3382	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	30915	3	intron_retention	FALSE	canonical	1	1	junction_1	159.056309910114	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156486539	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156486630_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.16	chr2	+	5861	10	NIC	ENSMUSG00000061689.16	novel	4851	13	NA	NA	-35735	2	intron_retention	FALSE	canonical	3	14	junction_2	164.298583960295	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGTTTCTCACCCTT	NA	False	NA	13	True	ATTAAA	-16	NA	156506806	156604877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.17	chr2	+	6694	11	NIC	ENSMUSG00000061689.16	novel	4851	13	NA	NA	-35689	-2	intron_retention	FALSE	canonical	3	14	junction_2	160.137316075923	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGAGGCCTCATGGTGT	NA	False	NA	3	True	NA	NA	NA	156506852	156606279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.18	chr2	+	4645	10	NIC	ENSMUSG00000061689.16	novel	4851	13	NA	NA	583	5	intron_retention	FALSE	canonical	3	14	junction_1	162.222146118704	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	2989	False	NA	16	True	ATTAAA	-19	NA	156543124	156604880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.19	chr2	+	3401	10	NIC	ENSMUSG00000061689.16	novel	4851	13	NA	NA	3901	0	intron_retention	FALSE	canonical	0	0	junction_9	154.636810656055	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	6307	False	NA	7	True	NA	NA	NA	156546442	156606283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603920_156604604
ES.20521.2	chr2	+	5076	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	-225	0	-225	0	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156455399	156606283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.20	chr2	+	1639	7	NNC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	-202	3	intron_retention	FALSE	canonical	0	0	junction_4	135.604408319035	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156562748	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602776_156602863_156603692_156603849_156604604
ES.20521.21	chr2	+	2931	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-97	-1239	-83	0	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156562867	156606283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.22	chr2	+	1494	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	-59	160	-45	9	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCACCCTTCAGTATG	NA	False	NA	20	True	ATTAAA	-23	NA	156562905	156604884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.23	chr2	+	3610	6	NIC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	-33	2	intron_retention	FALSE	canonical	3	183	junction_1	80.2436290305966	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGTTTCTCACCCTT	NA	False	NA	13	True	ATTAAA	-16	NA	156562917	156604877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156563008_156587754_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.24	chr2	+	2884	7	NNC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	-29	0	intron_retention	FALSE	non_canonical	0	0	junction_6	128.840232674253	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGGCCTCATGGTGTTA	NA	False	NA	5	True	NA	NA	NA	156562921	156606281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604595
ES.20521.25	chr2	+	4087	5	FSM	ENSMUSG00000061689.16	ENSMUST00000127944.9	4083	5	-1	-3	0	3	multi-exon	FALSE	canonical	3	183	junction_1	85.3591676388658	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156562964	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156563008_156587754_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.26	chr2	+	1562	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	1	32	0	-32	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	156562965	156605012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.28	chr2	+	2152	5	NNC	ENSMUSG00000061689.16	novel	4083	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	163.34989286804	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCTCATGGTGTTAT	NA	False	NA	6	True	NA	NA	NA	156562965	156606282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156563008_156587754_156587810_156602641_156602863_156603692_156603849_156604604
ES.20521.29	chr2	+	1339	6	NIC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_2	149.985866000767	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156562965	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156563008_156587754_156588117_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.30	chr2	+	494	2	ISM	ENSMUSG00000061689.16	ENSMUST00000177013.8	616	3	-14	2883	0	-2805	5prime_fragment	FALSE	canonical	3	183	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGTTTTTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	156562965	156588206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156563008_156587754
ES.20521.31	chr2	+	5056	7	NNC	ENSMUSG00000061689.16	novel	1595	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	161.837023644845	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156562965	156606283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156563008_156587754_156590341_156590863_156591277_156595972_156596061_156602770_156602863_156603692_156603849_156604604
ES.20521.32	chr2	+	3828	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-428	2	2	0	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGGCCTCATGGTGTTA	NA	False	NA	5	True	NA	NA	NA	156562983	156606281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.34	chr2	+	2412	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-415	1405	7	3	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156562996	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.35	chr2	+	2546	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-415	1271	7	-32	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	156562996	156605012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.36	chr2	+	3828	7	NNC	ENSMUSG00000061689.16	novel	3402	7	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_6	153.706430140924	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156562996	156606283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604593
ES.20521.37	chr2	+	3344	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-414	472	8	-470	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCGTTTTTGGTTGTCC	NA	False	NA	NA	False	AATATA	-15	NA	156562997	156605811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.38	chr2	+	2948	1	NIC	ENSMUSG00000061689.16	novel	981	8	NA	NA	8	-25066	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTTTATTTTTTAAG	NA	False	NA	NA	False	AATAAA	-39	NA	156562997	156565945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156563000_156565900
ES.20521.39	chr2	+	2662	8	NNC	ENSMUSG00000061689.16	novel	3402	7	NA	NA	10	-2	intron_retention	FALSE	canonical	1	1	junction_1	156.372918997883	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCTAGAACCTTTTC	NA	False	NA	NA	False	NA	NA	NA	156562999	156605042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156564023_156578502_156578592_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.4	chr2	+	2351	6	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	-56	-52811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAACTGGTTTTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	156455568	156538200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156455779_156506718_156506904_156507616_156507804_156509305_156509353_156509915_156510015_156536577
ES.20521.40	chr2	+	1736	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9216	3	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156572627	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.41	chr2	+	3033	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9322	0	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGGCCTCATGGTGTTA	NA	False	NA	5	True	NA	NA	NA	156572733	156606281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.43	chr2	+	1582	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	10886	3	intron_retention	FALSE	canonical	1	3	junction_1	132.237160687405	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156574297	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156574494_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.45	chr2	+	1387	6	ISM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	24789	166	-14111	3	3prime_fragment	FALSE	canonical	3	261	junction_2	50.6856981800586	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCGTTTCTCACCCTTC	NA	False	NA	14	True	ATTAAA	-17	NA	156587753	156604878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.46	chr2	+	2790	6	ISM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	24342	2	-14111	0	3prime_fragment	FALSE	canonical	3	261	junction_2	50.6856981800586	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGGCCTCATGGTGTTA	NA	False	NA	5	True	NA	NA	NA	156587753	156606281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.47	chr2	+	3625	6	NNC	ENSMUSG00000061689.16	novel	3402	7	NA	NA	-14111	1	intron_retention	FALSE	canonical	0	0	junction_1	145.337400554709	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCTCATGGTGTTAT	NA	False	NA	6	True	NA	NA	NA	156587753	156606282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156588951_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.48	chr2	+	1551	6	ISM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	24789	2	-14111	-2	3prime_fragment	FALSE	canonical	3	261	junction_2	50.6856981800586	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCTAGAACCTTTTC	NA	False	NA	NA	False	NA	NA	NA	156587753	156605042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.5	chr2	+	3654	13	NNC	ENSMUSG00000061689.16	novel	4851	13	NA	NA	-49	-2	intron_retention	FALSE	canonical	0	0	junction_2	159.708240933968	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTCTAGAACCTTTTC	NA	False	NA	NA	False	NA	NA	NA	156455575	156605042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156455779_156506718_156506904_156542530_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.8	chr2	+	3368	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29663	5	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTTTCTCACCCTTCAG	9362	False	NA	16	True	ATTAAA	-19	NA	156485287	156604880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20521.9	chr2	+	4762	13	NNC	ENSMUSG00000061689.16	novel	3303	11	NA	NA	29671	1	intron_retention	FALSE	canonical	1	3	junction_1	158.899579574299	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCTCATGGTGTTAT	9370	False	NA	6	True	NA	NA	NA	156485295	156606282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156485362_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ES.20522.1	chr2	+	178	1	Intergenic	novelGene_16986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGAGTCTATGG	NA	False	NA	NA	False	NA	NA	NA	156663410	156663588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156663400_156663600
ES.20523.1	chr2	+	3016	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	-116	0	-116	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681810	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156682159_156686075_156686302_156695048
ES.20523.10	chr2	+	2706	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	218	0	intron_retention	FALSE	canonical	0	0	junction_1	108.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682237	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682276_156686075_156686302_156695048
ES.20523.11	chr2	+	2841	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	247	2	intron_retention	FALSE	canonical	3	30	junction_1	93.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTTTGTTGTTTCTTT	NA	False	NA	NA	False	AATAAA	-37	NA	156682266	156697492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682438_156686075_156686302_156695048
ES.20523.12	chr2	+	1170	5	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	249	533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.4328313621376	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTGCTAAATTGTTT	NA	False	NA	NA	False	NA	NA	NA	156682268	156696000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682299_156685539_156685619_156686075_156686302_156695048_156695149_156695265
ES.20523.13	chr2	+	2887	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	278	0	intron_retention	FALSE	canonical	2	3	junction_1	99.7229495485701	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682297	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682438_156685539_156685619_156686075_156686302_156695048
ES.20523.14	chr2	+	2633	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	326	-10	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	82.8908251188809	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCAAACTGAATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	156682345	156697480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682438_156686075_156686302_156695048_156695149_156695265
ES.20523.15	chr2	+	3118	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-381	0	intron_retention	FALSE	canonical	3	38	junction_1	89.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682560	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156683011_156686075_156686302_156695048
ES.20523.16	chr2	+	3042	5	NNC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-359	-16	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	87.0359121282704	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAAGTCAAACTGA	NA	False	NA	NA	False	AATAAA	-19	NA	156682582	156697474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156683011_156685539_156685619_156686075_156686302_156695048_156695149_156695265
ES.20523.17	chr2	+	3166	4	NNC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-350	0	intron_retention	FALSE	canonical	1	2	junction_1	99.9677725847463	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682591	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156683011_156685539_156685619_156686075_156686302_156695048
ES.20523.18	chr2	+	2878	4	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-258	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	80.6735534250365	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682683	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156683011_156686075_156686302_156695048_156695149_156695265
ES.20523.19	chr2	+	1537	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-46	777	intron_retention	FALSE	canonical	3	38	junction_1	89.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCCACAGGTGGTGG	NA	False	NA	NA	False	TATAAA	-11	NA	156682895	156696244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156683011_156686075_156686302_156695048
ES.20523.2	chr2	+	2810	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	-120	0	-27	0	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681899	156697490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
ES.20523.20	chr2	+	2821	5	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	1239	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.4328313621376	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAATTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-30	NA	156684180	156697485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156684377_156685539_156685619_156686075_156686302_156695048_156695149_156695265
ES.20523.21	chr2	+	4248	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	1261	-16	intron_retention	FALSE	canonical	0	0	junction_1	108.5	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAAGTCAAACTGA	NA	False	NA	NA	False	AATAAA	-19	NA	156684202	156697474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156685799_156686075_156686302_156695048
ES.20523.22	chr2	+	2825	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	1275	-3	intron_retention	FALSE	canonical	0	0	junction_1	108.5	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156684216	156697487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156684377_156686075_156686302_156695048
ES.20523.23	chr2	+	4056	3	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	1286	-3	intron_retention	FALSE	canonical	2	8	junction_1	104.5	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156684227	156697487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156685619_156686075_156686302_156695048
ES.20523.24	chr2	+	3667	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	1558	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	89.5259118294189	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156684499	156697487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156685619_156686075_156686302_156695048_156695149_156695265
ES.20523.25	chr2	+	3750	2	ISM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	2969	5	2047	-5	intron_retention	FALSE	canonical	3	217	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAATTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-30	NA	156684988	156697485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_156686302_156695048
ES.20523.26	chr2	+	4200	1	Genic_Genomic	ENSMUSG00000062175.14	novel	NA	NA	NA	NA	-1431	-469	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAACATAAAAATCAGTA	NA	False	NA	NA	False	NA	NA	NA	156690444	156694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_156690400_156694600
ES.20523.27	chr2	+	4184	1	Genic_Genomic	ENSMUSG00000062175.14	novel	NA	NA	NA	NA	2955	2404	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGAAGCCCTAGGTTG	NA	False	NA	NA	False	NA	NA	NA	156695710	156699894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_156695700_156699900
ES.20523.28	chr2	+	1160	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	-114	-1	-114	1	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGCATGCCTGGTAA	4528	False	NA	15	True	AATAAA	-19	NA	156704933	156715484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
ES.20523.29	chr2	+	950	3	FSM	ENSMUSG00000027637.4	ENSMUST00000152551.2	765	3	-23	-162	-12	-3	multi-exon	FALSE	canonical	3	93	junction_1	636.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	4630	False	NA	11	True	AATAAA	-15	NA	156705035	156715480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156705338_156714257_156714388_156714962
ES.20523.3	chr2	+	2749	4	NNC	ENSMUSG00000062175.14	novel	2690	4	NA	NA	45	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	106.007337272264	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156681971	156697487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682159_156686075_156686302_156695048_156695330_156695432
ES.20523.30	chr2	+	1265	4	NNC	ENSMUSG00000027637.4	novel	1045	4	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	636.647643694864	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGTTGGCATGCC	4632	False	NA	9	True	AATAAA	-13	NA	156705037	156715478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156705553_156707176_156707281_156714257_156714388_156714962
ES.20523.31	chr2	+	1163	5	NNC	ENSMUSG00000027637.4	novel	1045	4	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	633.413520143042	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	4633	False	NA	11	True	AATAAA	-15	NA	156705038	156715480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156705338_156707176_156707281_156713304_156713417_156714257_156714388_156714962
ES.20523.32	chr2	+	2866	3	NIC	ENSMUSG00000027637.4	novel	1045	4	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	1355	junction_1	5.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	4657	False	NA	11	True	AATAAA	-15	NA	156705062	156715480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156707281_156714257_156714388_156714962
ES.20523.33	chr2	+	1015	4	NNC	ENSMUSG00000027637.4	novel	1045	4	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	599.374303382749	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	4661	False	NA	11	True	AATAAA	-15	NA	156705066	156715480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156705338_156707176_156707273_156714257_156714388_156714962
ES.20523.34	chr2	+	823	5	NNC	ENSMUSG00000027637.4	novel	1045	4	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_4	552.399764663237	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGTTGGCATGCC	4664	False	NA	9	True	AATAAA	-13	NA	156705069	156715478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962_156715062_156715256
ES.20523.4	chr2	+	1386	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	51	1463	-42	560	multi-exon	FALSE	canonical	3	217	junction_2	7.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTGTGGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	156681977	156696027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156682159_156686075_156686302_156695048
ES.20523.5	chr2	+	2600	2	NIC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	-22	-3	intron_retention	FALSE	canonical	2	3	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAATTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	156681997	156697487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_156682159_156695048
ES.20523.6	chr2	+	656	2	Fusion	ENSMUSG00000062175.14_ENSMUSG00000027637.4	novel	2900	3	NA	NA	1	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTGGCATGCCTG	NA	False	NA	11	True	AATAAA	-15	NA	156682020	156715480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_156682159_156714962
ES.20523.7	chr2	+	2623	5	NNC	ENSMUSG00000062175.14	novel	2690	4	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.54103639808	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTGAATTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-30	NA	156682022	156697485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265_156695480_156695538
ES.20523.8	chr2	+	2874	4	NNC	ENSMUSG00000062175.14	novel	2690	4	NA	NA	3	-10	intron_retention	FALSE	canonical	0	0	junction_3	109.130910174687	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCAAACTGAATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	156682022	156697480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_156682159_156686075_156686302_156689524_156689605_156695048
ES.20523.9	chr2	+	1551	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	103	1246	10	777	multi-exon	FALSE	canonical	3	217	junction_2	7.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCCACAGGTGGTGG	NA	False	NA	NA	False	TATAAA	-11	NA	156682029	156696244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_156682159_156686075_156686302_156695048
ES.20524.1	chr2	-	178	1	Intergenic	novelGene_16981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATCAATTTAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	156469887	156469709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156469700_156469900
ES.20525.1	chr2	-	221	1	Intergenic	novelGene_16984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACCTGACCTCACTGA	NA	False	NA	NA	False	AAAAAG	-29	NA	156518604	156518383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156518400_156518600
ES.20526.1	chr2	-	1428	1	NIC	ENSMUSG00000086638.8	novel	994	4	NA	NA	7	-3523	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	156562822	156561394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156561400_156562800
ES.20527.1	chr2	-	7061	1	Intergenic	novelGene_16985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTCTTGCTACTTTCCA	NA	False	NA	NA	False	NA	NA	NA	156580304	156573243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156573200_156580300
ES.20528.1	chr2	-	3595	1	Antisense	novelGene_ENSMUSG00000061689.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156589286	156585691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_156585700_156589300
ES.20529.1	chr2	-	5976	2	Antisense	novelGene_ENSMUSG00000061689.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTGGGGAGGCCAAGCA	NA	False	NA	NA	False	NA	NA	NA	156600782	156593550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_156593849_156595104
ES.2053.1	chr1	+	186	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTATT	5331	False	NA	NA	False	NA	NA	NA	180646683	180646869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180646700_180646900
ES.20530.1	chr2	-	1873	5	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	37	72879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.3935366351201	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGGAAGCAAGAGATAG	NA	False	NA	NA	False	AATAAA	-16	NA	156681683	156602089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156603053_156603800_156604272_156679742_156679834_156680337_156680457_156681454
ES.20530.10	chr2	-	2915	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	5	6269	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.0636956583072	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTCTCGAGTTA	NA	False	NA	-1	True	NA	NA	NA	156681715	156668699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156681635
ES.20530.11	chr2	-	3187	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	6	6269	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	69.1391511534689	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTCTCGAGTTA	NA	False	NA	-1	True	NA	NA	NA	156681806	156668699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156681454
ES.20530.12	chr2	-	3382	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-1	6267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	71.8207645616657	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	-3	True	NA	NA	NA	156681741	156668701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671768_156679742_156679834_156680337_156680457_156681635
ES.20530.13	chr2	-	4025	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	3	6267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	78.6172160958824	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	-3	True	NA	NA	NA	156681809	156668701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156680617
ES.20530.14	chr2	-	3079	5	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-16	6267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.6236390160651	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	-3	True	NA	NA	NA	156681828	156668701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671325_156671628_156671768_156679742_156679834_156680337_156680454_156681718
ES.20530.15	chr2	-	3093	5	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-16	6267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.233538996693	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	-3	True	NA	NA	NA	156681756	156668701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156671325_156671628_156671768_156679742_156679834_156680337_156680457_156681635
ES.20530.16	chr2	-	4348	1	Intergenic	novelGene_16988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAATGGTTTCTCTCG	NA	False	NA	-6	True	NA	NA	NA	156673052	156668704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156668700_156673100
ES.20530.17	chr2	-	4932	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	17	2740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0410322116239	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156681703	156672228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676816_156676891_156676959_156679742_156679834_156680337_156680457_156681635
ES.20530.18	chr2	-	3128	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-16	2347	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCGTGTTTCCTTGGG	NA	False	NA	5	True	NA	NA	NA	156681828	156672621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
ES.20530.19	chr2	-	4020	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	14	2343	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	71.7232334897293	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681706	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156679742_156679834_156680337_156680457_156680617
ES.20530.2	chr2	-	2092	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-25	72463	intron_retention	FALSE	canonical	0	0	junction_3	81.0856885577775	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGACAAACAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	156681837	156602505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156604272_156679742_156679834_156680337_156680454_156681718
ES.20530.20	chr2	-	3307	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	-90	-2343	-18	2343	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681830	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
ES.20530.21	chr2	-	4652	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-18	2343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.271527025735	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681830	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676959_156679742_156679834_156680337_156680454_156681718
ES.20530.22	chr2	-	4456	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-13	2343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.3788853279164	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681825	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156676959_156679742_156679834_156680337_156680454_156681718
ES.20530.23	chr2	-	3023	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-1	2343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.0755776174488	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681813	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156679742_156679834_156680337_156680454_156681718
ES.20530.24	chr2	-	3576	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-1	2343	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	69.7726466620138	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681813	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675633_156679742_156679834_156680337_156680457_156681454
ES.20530.25	chr2	-	4610	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	19	2343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.7303028283098	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681701	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676959_156679742_156679834_156680336_156680457_156681635
ES.20530.26	chr2	-	3664	6	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	27	2343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.9622108887545	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681693	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675633_156676378_156676959_156679742_156679834_156680337_156680457_156681635
ES.20530.27	chr2	-	3421	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-13	2343	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	68.6164865190737	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681825	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681335
ES.20530.28	chr2	-	3370	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	14	2343	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	66.2382064974588	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681798	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681454
ES.20530.29	chr2	-	3783	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-6	2343	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.116968793294	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTTTCGTGTTTCCT	NA	False	NA	1	True	NA	NA	NA	156681726	156672625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156676378_156676959_156679742_156679834_156680337_156680457_156681454
ES.20530.3	chr2	-	1202	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	25	63403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.3011139055856	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTCGTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	156681695	156611565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156612198_156679742_156679834_156680337_156680457_156681335
ES.20530.32	chr2	-	4826	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	2	2342	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	66.6783323126786	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTCTTTCGTGTTTCC	NA	False	NA	0	True	NA	NA	NA	156681738	156672626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676959_156679742_156679834_156680337_156680457_156681454
ES.20530.34	chr2	-	4070	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	57	2341	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	71.4580296397823	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681663	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156680617
ES.20530.35	chr2	-	3522	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-9	2341	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	70.6377200934458	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681821	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675645_156679742_156679834_156680337_156680457_156681335
ES.20530.36	chr2	-	3129	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-8	2341	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	66.727055981813	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681728	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675645_156679742_156679834_156680337_156680457_156681635
ES.20530.37	chr2	-	4587	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	5	2341	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	71.4580296397823	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681715	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156676816_156679742_156679834_156680337_156680457_156681335
ES.20530.38	chr2	-	3194	6	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-8	2341	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	64.2825015070198	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681728	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675645_156679742_156679834_156680337_156680457_156681454_156681520_156681635
ES.20530.4	chr2	-	4799	4	Fusion	ENSMUSG00000082196.4_ENSMUSG00000087179.9	novel	388	3	NA	NA	0	3689	multi-exon	FALSE	canonical	3	10	junction_1	69.7726466620138	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGAGTCTGCATCTGTC	NA	False	NA	NA	False	NA	NA	NA	156681720	156628042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156632366_156679742_156679834_156680337_156680457_156681454
ES.20530.40	chr2	-	3980	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	24	2341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.4857744664427	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681788	156672627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675974_156676959_156679742_156679834_156680337_156680454_156681718
ES.20530.41	chr2	-	3089	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	18	2339	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	65.9052349969257	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681702	156672629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681635
ES.20530.42	chr2	-	5227	1	Genic_Genomic	ENSMUSG00000087179.9	novel	NA	NA	NA	NA	3864	2339	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156677856	156672629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_156672600_156677900
ES.20530.43	chr2	-	3264	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	34	2339	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	68.7329776906415	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681686	156672629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675633_156679742_156679834_156680337_156680457_156681635
ES.20530.44	chr2	-	4826	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-13	2339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.9343886982894	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681825	156672629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676959_156679742_156679834_156680337_156680457_156681335_156681520_156681722
ES.20530.45	chr2	-	4661	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-13	2338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.271527025735	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGATGGTCTTTCGTGT	NA	False	NA	-4	True	NA	NA	NA	156681825	156672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156676959_156679742_156679834_156680337_156680477_156681722
ES.20530.46	chr2	-	3190	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	5	2338	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	68.2802130928134	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGATGGTCTTTCGTGT	NA	False	NA	-4	True	NA	NA	NA	156681715	156672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681335_156681520_156681635
ES.20530.47	chr2	-	3846	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	45	2338	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.7566251315027	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGATGGTCTTTCGTGT	NA	False	NA	-4	True	NA	NA	NA	156681675	156672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156676378_156676959_156679742_156679834_156680337_156680457_156681335
ES.20530.48	chr2	-	4602	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	35	2338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.2733476548499	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGATGGTCTTTCGTGT	NA	False	NA	-4	True	NA	NA	NA	156681685	156672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156676983_156679742_156679834_156680337_156680457_156681454
ES.20530.49	chr2	-	3991	6	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	6	2338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.2649228476122	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGATGGTCTTTCGTGT	NA	False	NA	-4	True	NA	NA	NA	156681806	156672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156674737_156675177_156675347_156675537_156676959_156679742_156679834_156680337_156680454_156681718
ES.20530.5	chr2	-	4631	4	Fusion	ENSMUSG00000082196.4_ENSMUSG00000087179.9	novel	388	3	NA	NA	-9	3687	multi-exon	FALSE	canonical	0	0	junction_3	79.3011139055856	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTTGAGTCTGCATCTG	NA	False	NA	NA	False	NA	NA	NA	156681821	156628044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156632366_156679742_156679834_156680337_156680454_156681718
ES.20530.50	chr2	-	4646	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	-16	2335	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	64.4301947847436	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGATGGTCTTTCG	NA	False	NA	-7	True	NA	NA	NA	156681756	156672633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156675347_156675537_156676959_156679742_156679834_156680337_156680457_156681454
ES.20530.51	chr2	-	3773	1	Genic_Genomic	ENSMUSG00000087179.9	novel	NA	NA	NA	NA	3907	928	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTCATGCTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	156677813	156674040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_156674000_156677800
ES.20530.6	chr2	-	1146	4	Fusion	ENSMUSG00000082196.4_ENSMUSG00000087179.9	novel	388	3	NA	NA	6	131	multi-exon	FALSE	canonical	3	10	junction_1	68.7329776906415	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGGTTTTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	156681806	156631600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156632366_156679742_156679834_156680337_156680457_156681635
ES.20530.7	chr2	-	675	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	0	30831	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	71.386273190299	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	156681720	156644137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156644337_156679742_156679834_156680337_156680457_156681454
ES.20530.8	chr2	-	797	7	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	-8	21984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.3291665295962	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTATGAGTGTTTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	156681728	156652984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156653155_156654317_156654485_156654775_156654898_156655632_156655668_156679742_156679834_156680337_156680457_156681635
ES.20530.9	chr2	-	156	1	Intergenic	novelGene_16987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAATAAATAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	156667167	156667011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156667000_156667200
ES.20531.1	chr2	-	1325	2	ISM	ENSMUSG00000085741.9	ENSMUST00000153616.9	1431	3	8396	4	1618	-4	3prime_fragment	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	156696418	156694353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156694611_156695350
ES.20532.1	chr2	-	1880	1	FSM	ENSMUSG00000074629.4	ENSMUST00000099141.3	1331	1	271	-820	271	820	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGCCAAACCAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	156699595	156697715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156697700_156699600
ES.20533.1	chr2	-	2161	1	Genic_Genomic	ENSMUSG00000085741.9	novel	NA	NA	NA	NA	-1248	-7935	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCAAGAATTGTTTATT	NA	False	NA	NA	False	ACTAAA	-20	NA	156706131	156703970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_156704000_156706100
ES.20534.1	chr2	-	161	1	Intergenic	novelGene_16989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	156725278	156725117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156725100_156725300
ES.20535.1	chr2	-	205	1	Intergenic	novelGene_16990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAATAAACCTTTA	NA	False	NA	NA	False	AAGAAA	-32	NA	156744895	156744690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156744700_156744900
ES.20536.1	chr2	+	2652	1	Intergenic	novelGene_16991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGACATCACTGCCTT	1519	False	NA	NA	False	NA	NA	NA	156782709	156785361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156782700_156785400
ES.20537.1	chr2	+	176	1	Intergenic	novelGene_16992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAATTACTTA	NA	False	NA	NA	False	NA	NA	NA	156820406	156820582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156820400_156820600
ES.20538.1	chr2	+	176	1	Intergenic	novelGene_16994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAACAAACTT	NA	False	NA	NA	False	NA	NA	NA	156826637	156826813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156826600_156826800
ES.20539.1	chr2	+	160	1	Intergenic	novelGene_16996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAATAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	156831303	156831463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156831300_156831500
ES.2054.1	chr1	+	4360	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-1143	-4	-1143	4	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTTTTTTGTTTTTA	NA	False	NA	26	True	AATAAA	-26	NA	180677548	180695682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.10	chr1	+	2633	8	NNC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	25	21651	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	164.022397674145	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATATTTTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	180678716	180717329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636_180695113_180717318
ES.2054.11	chr1	+	1440	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	28	1745	28	115	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTCGGTTCTAACTAG	NA	False	NA	NA	False	ACTAAA	-13	NA	180678719	180693933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.12	chr1	+	2461	6	NIC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	34	115	intron_retention	FALSE	canonical	3	422	junction_4	9.53729521405309	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTCGGTTCTAACTAG	NA	False	NA	NA	False	ACTAAA	-13	NA	180678725	180693933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180688784_180689922_180690407_180693636
ES.2054.13	chr1	+	3003	6	NIC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	34	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	174.148672116672	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTGTTTTGGAGTTT	NA	False	NA	16	True	AATAAA	-16	NA	180678725	180695672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180678858_180683367_180683486_180685687_180685800_180688662_180688784_180689922_180690407_180693636
ES.2054.14	chr1	+	1238	7	NNC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	34	19232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.133235553846	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTATCTGCGTGGCTGT	NA	False	NA	NA	False	TTTAAA	-15	NA	180678725	180714910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180714809
ES.2054.16	chr1	+	1578	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	41	1594	41	266	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGTGTGGTTCACTT	NA	False	NA	NA	False	NA	NA	NA	180678732	180694084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.17	chr1	+	3080	7	NNC	ENSMUSG00000038806.8	novel	924	2	NA	NA	4507	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.091166729412	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAATTGTTTTGGAGTT	NA	False	NA	15	True	AATAAA	-15	NA	180683198	180695671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180683239_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.18	chr1	+	3048	6	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	4673	2	4673	-2	3prime_fragment	FALSE	canonical	3	422	junction_4	47.1533667938992	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTTTGGAGTTTTTTG	NA	False	NA	20	True	AATAAA	-20	NA	180683364	180695676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.2	chr1	+	2565	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-93	741	-93	-741	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTTGTCAGTTGTATA	NA	False	NA	NA	False	ATTAAA	-20	NA	180678598	180694937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.3	chr1	+	2719	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	-51	545	-51	-545	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCTGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	180678640	180695133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.4	chr1	+	4923	6	NIC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	422	junction_4	46.6373241084863	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTGGAGTTTTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	180678646	180695677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180678858_180683367_180683486_180685687_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.5	chr1	+	3235	7	NNC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	176.133235553846	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTGTTTTGGAGTTT	NA	False	NA	16	True	AATAAA	-16	NA	180678667	180695672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180678858_180683367_180683490_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ES.2054.7	chr1	+	2677	6	NNC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.971456211594	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTGTTTTGGAGTTT	NA	False	NA	16	True	AATAAA	-16	NA	180678706	180695672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688753_180693636
ES.2054.9	chr1	+	4028	7	NNC	ENSMUSG00000038806.8	novel	3213	7	NA	NA	18	-545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.133235553846	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCTGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	180678709	180695133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180692258
ES.20540.10	chr2	-	2576	15	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-43	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.603188119024	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5871	False	NA	-1	True	AATAAA	-21	NA	156834019	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156770802_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.11	chr2	-	2601	15	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	58.5228457047994	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5859	False	NA	-1	True	AATAAA	-21	NA	156834031	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780572_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
ES.20540.12	chr2	-	2675	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	-66	3	-53	-3	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCGGCTGCTGGTGTTA	5861	False	NA	-3	True	AATAAA	-19	NA	156834029	156769267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.13	chr2	-	1601	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-55	1040	-55	18	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCGTGTCTGTGTCTGTGT	5859	False	NA	3	True	NA	NA	NA	156834031	156770304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.14	chr2	-	1352	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-45	1279	-45	-221	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCCCCACTTCCTTT	5869	False	NA	NA	False	AATAGA	-16	NA	156834021	156770543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.15	chr2	-	1951	14	NNC	ENSMUSG00000027634.15	novel	4023	11	NA	NA	-2	-1290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.8850669182394	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAATTATTTGATTAAA	5933	False	NA	NA	False	ATTAAA	-19	NA	156833957	156777512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156778502_156778701_156778770_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.16	chr2	-	216	1	Intergenic	novelGene_16993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	TTTAAA	-18	NA	156825612	156825396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156825400_156825600
ES.20540.17	chr2	-	198	1	Intergenic	novelGene_16995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGGCCGATAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	156828297	156828099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156828100_156828300
ES.20540.18	chr2	-	1575	1	NIC	ENSMUSG00000027634.15	novel	2612	17	NA	NA	1	-20399	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5936	False	NA	NA	False	NA	NA	NA	156833954	156832379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156832400_156834000
ES.20540.2	chr2	-	2766	16	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_15	44.4400220021948	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5970	False	NA	-1	True	AATAAA	-21	NA	156833920	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833681
ES.20540.3	chr2	-	5026	15	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	46.603188119024	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5917	False	NA	-1	True	AATAAA	-21	NA	156833973	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156773263_156773314_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.4	chr2	-	2643	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	-58	1	-58	-1	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5856	False	NA	-1	True	AATAAA	-21	NA	156834034	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.5	chr2	-	6629	14	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	142	junction_13	15.2699573553149	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5909	False	NA	-1	True	AATAAA	-21	NA	156833981	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156779299_156779405_156779472_156780470_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.6	chr2	-	2817	18	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-26	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	66.7043780305529	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5888	False	NA	-1	True	AATAAA	-21	NA	156834002	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156778363_156778502_156778701_156778770_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.7	chr2	-	2723	18	NNC	ENSMUSG00000027634.15	novel	2612	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	70.6583475332148	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5936	False	NA	-1	True	AATAAA	-21	NA	156833954	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156777940_156778062_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.8	chr2	-	2627	16	NNC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.1252531119788	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5900	False	NA	-1	True	AATAAA	-21	NA	156833990	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156770802_156773135_156773219_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156787993_156790157_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ES.20540.9	chr2	-	2490	14	NIC	ENSMUSG00000027634.15	novel	2586	16	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	59.3794338114074	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCTGGTGTTATT	5921	False	NA	-1	True	AATAAA	-21	NA	156833969	156769265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156770802_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
ES.20541.1	chr2	-	4119	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	-17	-2022	-17	930	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGCTTGGGCCTGGCCT	8117	False	NA	NA	False	AATAAA	-32	NA	156849012	156835162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ES.20541.10	chr2	-	3828	10	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	11	912	multi-exon	FALSE	canonical	0	0	junction_9	67.6408452831371	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGCCTTCATTCAGA	8145	False	NA	NA	False	AATAAA	-14	NA	156848984	156835180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847193_156848894
ES.20541.11	chr2	-	4243	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	199	868	multi-exon	FALSE	canonical	2	4	junction_10	63.1497426756436	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATATAAAT	8378	False	NA	NA	False	NA	NA	NA	156848751	156835224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848447
ES.20541.12	chr2	-	3227	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	-2	-1145	-2	53	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTCCATGTCATTAT	8132	False	NA	NA	False	NA	NA	NA	156848997	156836039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ES.20541.13	chr2	-	3267	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	157	53	multi-exon	FALSE	canonical	3	10	junction_10	61.4528274369862	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCTCCATGTCATTAT	8336	False	NA	NA	False	NA	NA	NA	156848793	156836039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
ES.20541.14	chr2	-	4314	10	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	10	-1143	10	51	intron_retention	FALSE	canonical	3	171	junction_9	21.9027029168029	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGCCTCCATGTCATT	8144	False	NA	NA	False	NA	NA	NA	156848985	156836041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
ES.20541.15	chr2	-	7083	8	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	1	-1142	1	50	intron_retention	FALSE	canonical	3	177	junction_5	21.1167792844207	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGCCTCCATGTCAT	8135	False	NA	NA	False	NA	NA	NA	156848994	156836042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608
ES.20541.16	chr2	-	2982	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	21	50	multi-exon	FALSE	canonical	3	8	junction_9	63.4460400655549	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGCCTCCATGTCAT	8155	False	NA	NA	False	NA	NA	NA	156848974	156836042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847193_156847767_156847794_156848894
ES.20541.17	chr2	-	4673	9	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	-1	-1135	-1	43	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAATTATGCCTCC	8133	False	NA	NA	False	NA	NA	NA	156848996	156836049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
ES.20541.19	chr2	-	2433	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	-346	-7	-267	7	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACAGTGTGTCTCTGCC	7788	False	NA	1	True	AATAAA	-37	NA	156849341	156837177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ES.20541.20	chr2	-	2206	11	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	-265	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	63.4460400655549	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATGTGACAGTGTGTC	7790	False	NA	-5	True	AATAAA	-31	NA	156849339	156837183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847193_156847767_156847794_156848894
ES.20541.21	chr2	-	6872	7	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	2	1	2	-1	intron_retention	FALSE	canonical	3	177	junction_5	22.8065536390067	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTATGTGACAGTGTG	8136	False	NA	-7	True	AATAAA	-29	NA	156848993	156837185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602
ES.20541.22	chr2	-	3483	10	ISM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	-224	-11	-224	-1	intron_retention	FALSE	canonical	3	171	junction_9	21.9027029168029	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTATGTGACAGTGTG	7831	False	NA	-7	True	AATAAA	-29	NA	156849298	156837185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
ES.20541.23	chr2	-	5910	8	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	20	12	20	0	intron_retention	FALSE	canonical	3	177	junction_5	21.1167792844207	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8154	False	NA	-18	True	AATAAA	-18	NA	156848975	156837196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608
ES.20541.24	chr2	-	3520	9	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	4	13	4	-1	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTGAAGTGTACACTA	8138	False	NA	-19	True	AATAAA	-17	NA	156848991	156837197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
ES.20541.25	chr2	-	2469	10	NNC	ENSMUSG00000027635.16	novel	2636	11	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_3	105.030624575718	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTGAAGTGTACACTA	8154	False	NA	-19	True	AATAAA	-17	NA	156848975	156837197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156838202_156838652_156838741_156839526_156839673_156840639_156840718_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847407_156847767_156848283_156848894
ES.20541.26	chr2	-	2526	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	108	2	-16	-2	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTGAAGTGTACACT	8163	False	NA	-20	True	AATAAA	-16	NA	156848966	156837198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ES.20541.28	chr2	-	2555	11	NNC	ENSMUSG00000027635.16	novel	2636	11	NA	NA	199	-2	intron_retention	TRUE	canonical	2	3	junction_10	63.4331143804244	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTGAAGTGTACACT	8378	False	NA	-20	True	AATAAA	-16	NA	156848751	156837198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848650
ES.20541.3	chr2	-	7944	8	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	4	-2006	4	914	intron_retention	FALSE	canonical	3	177	junction_5	21.1167792844207	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	8138	False	NA	NA	False	AATAAA	-16	NA	156848991	156835178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608
ES.20541.30	chr2	-	1963	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	5	112	5	-100	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTGGGAAAGCTACT	8139	False	NA	-118	True	AATAAA	-18	NA	156848990	156837296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ES.20541.31	chr2	-	2479	9	NIC	ENSMUSG00000027635.16	novel	2636	11	NA	NA	217	-104	intron_retention	FALSE	canonical	0	0	junction_8	70.8431365765238	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATGAGGTGGGAAAGC	8396	False	NA	-122	True	AATAAA	-14	NA	156848733	156837300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847767
ES.20541.32	chr2	-	2168	11	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	198	-104	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	63.1497426756436	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATGAGGTGGGAAAGC	8377	False	NA	-122	True	AATAAA	-14	NA	156848752	156837300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848447
ES.20541.33	chr2	-	2005	11	NNC	ENSMUSG00000027635.16	novel	2080	11	NA	NA	157	-105	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	61.4528274369862	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTAATGAGGTGGGAAAG	8336	False	NA	-123	True	AATAAA	-13	NA	156848793	156837301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
ES.20541.34	chr2	-	3371	9	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	49	117	4	-105	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTAATGAGGTGGGAAAG	8183	False	NA	-123	True	AATAAA	-13	NA	156848946	156837301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
ES.20541.35	chr2	-	2436	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	84	116	5	-116	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATACTGTAGTTAATG	8139	False	NA	-134	True	AATAAA	-2	NA	156848990	156837312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ES.20541.36	chr2	-	3260	9	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	2	275	2	-263	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGGCTGAGATAGAGT	8136	False	NA	NA	False	TTTAAA	-18	NA	156848993	156837459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
ES.20541.37	chr2	-	1597	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	9	474	9	-462	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGGCTGTGCCAATT	8143	False	NA	NA	False	NA	NA	NA	156848986	156837658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ES.20541.4	chr2	-	4878	11	FSM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103130.8	2636	11	-224	-2018	-224	914	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	7831	False	NA	NA	False	AATAAA	-16	NA	156849298	156835178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ES.20541.5	chr2	-	4126	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	158	913	multi-exon	FALSE	canonical	3	10	junction_10	61.4528274369862	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8337	False	NA	NA	False	AATAAA	-15	NA	156848792	156835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848650
ES.20541.6	chr2	-	4071	11	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	9	913	multi-exon	FALSE	canonical	0	0	junction_9	65.6228618699307	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8188	False	NA	NA	False	AATAAA	-15	NA	156848941	156835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847452_156847767_156847794_156848894
ES.20541.7	chr2	-	5537	9	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	5	-2005	5	913	intron_retention	FALSE	canonical	3	177	junction_5	19.9421037004625	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8139	False	NA	NA	False	AATAAA	-15	NA	156848990	156835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087
ES.20541.8	chr2	-	5201	10	ISM	ENSMUSG00000027635.16_ENSMUSG00000082163.3	ENSMUST00000103129.9	2080	11	-15	-2005	-15	913	intron_retention	FALSE	canonical	3	171	junction_9	21.9027029168029	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCCTTCATTCAGAT	8119	False	NA	NA	False	AATAAA	-15	NA	156849010	156835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
ES.20542.1	chr2	-	4428	1	Intergenic	novelGene_16997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGCTCTCTGATCTT	6197	False	NA	NA	False	AATAAA	-17	NA	156856788	156852360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156852400_156856800
ES.20543.1	chr2	+	2806	4	Antisense	novelGene_ENSMUSG00000055485.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	227	False	NA	NA	False	NA	NA	NA	156863407	156867956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156864810_156865718_156866031_156866638_156866835_156867060
ES.20544.1	chr2	-	7935	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	-66	-5	-66	5	multi-exon	FALSE	canonical	2	9	junction_5	3.79580864445326	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATGTCTTGGTAA	7453	False	NA	3	True	NA	NA	NA	156921240	156857713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ES.20544.10	chr2	-	5320	14	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	-42	4276	-42	795	5prime_fragment	FALSE	canonical	2	9	junction_4	3.83382639826988	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTAGCCTTGAACTTTCT	7477	False	NA	NA	False	NA	NA	NA	156921216	156861994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ES.20544.11	chr2	-	171	1	Intergenic	novelGene_16998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAAAGAA	8950	False	NA	NA	False	NA	NA	NA	156878285	156878114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156878100_156878300
ES.20544.12	chr2	-	3209	5	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	115	23353	115	-2102	5prime_fragment	FALSE	canonical	2	14	junction_1	1.22474487139159	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCATATGTGTGTGCAG	7634	False	NA	NA	False	NA	NA	NA	156921059	156881071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ES.20544.13	chr2	-	1884	3	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	20	37226	20	-15975	5prime_fragment	FALSE	canonical	2	14	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTAGGCTTGGGTCTC	7539	False	NA	NA	False	NA	NA	NA	156921154	156894944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156895598_156902107_156902333_156920148
ES.20544.14	chr2	-	2507	1	NIC	ENSMUSG00000055485.7	novel	7864	15	NA	NA	-15319	-16002	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156897478	156894971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156895000_156897500
ES.20544.2	chr2	-	3752	2	NNC	ENSMUSG00000055485.7	novel	7864	15	NA	NA	6177	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTTTATGTCTTGG	NA	False	NA	0	True	NA	NA	NA	156863215	156857716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156860420_156862166
ES.20544.3	chr2	-	6881	15	NNC	ENSMUSG00000055485.7	novel	7864	15	NA	NA	967	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.44920889221733	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCTTCAAATGCCT	8486	False	NA	-12	True	NA	NA	NA	156920207	156857728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875298_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ES.20544.5	chr2	-	6165	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	140	1559	140	-1559	multi-exon	FALSE	canonical	2	9	junction_5	3.79580864445326	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTTTAATAATTTAAC	7659	False	NA	NA	False	TATAAA	-17	NA	156921034	156859277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ES.20544.7	chr2	-	5444	15	NNC	ENSMUSG00000055485.7	novel	7864	15	NA	NA	-18548	-1578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.3358391032962	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTAAGGTGATTTAC	NA	False	NA	NA	False	NA	NA	NA	156900707	156859296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156898317_156898566_156900546
ES.20544.8	chr2	-	4153	10	ISM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	38714	3466	-301	1605	internal_fragment	FALSE	canonical	2	9	junction_4	4.5242829047783	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATCTGGAATCCTCAGT	4775	False	NA	NA	False	AATAAA	-36	NA	156882460	156861184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746
ES.20544.9	chr2	-	5622	14	NNC	ENSMUSG00000055485.7	novel	7864	15	NA	NA	-84	1053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5.61801834969545	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCTTTTTTATTTTTT	7435	False	NA	NA	False	NA	NA	NA	156921258	156861736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883879_156895438_156895598_156902107_156902333_156920148
ES.20545.1	chr2	+	177	1	Intergenic	novelGene_16999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTGGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	156925570	156925747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156925600_156925700
ES.20546.1	chr2	+	176	1	Intergenic	novelGene_17001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTTTTACAAG	NA	False	NA	NA	False	NA	NA	NA	156956751	156956927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156956800_156956900
ES.20547.1	chr2	+	2826	1	Intergenic	novelGene_17002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGCAGATTCAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	156973265	156976091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_156973300_156976100
ES.20548.1	chr2	-	3926	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	3	-3	3	3	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTCGAGTTACTGAAT	NA	False	NA	-2	True	ATTAAA	-21	NA	156977182	156939449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.10	chr2	-	1943	16	NNC	ENSMUSG00000027639.17	novel	3926	16	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.1301789327023	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATCTGCGGTTAGTTC	NA	False	NA	-2	True	AGTAAA	-21	NA	156977073	156941317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156941424_156943646_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.11	chr2	-	1852	16	NNC	ENSMUSG00000027639.17	novel	2036	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	67.626096212105	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977015	156941320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962490_156963750_156963867_156965208_156965317_156968691_156968765_156971769_156971837_156976798
ES.20548.13	chr2	-	2189	18	NNC	ENSMUSG00000027639.17	novel	2036	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.2255045092799	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977140	156941320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156941424_156943240_156943364_156943640_156943779_156944898_156944952_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.14	chr2	-	2050	17	NNC	ENSMUSG00000027639.17	novel	2036	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.8796902154834	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977124	156941320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156941424_156943640_156943779_156944898_156944952_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.15	chr2	-	194	1	Intergenic	novelGene_17000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9307	False	NA	NA	False	NA	NA	NA	156944088	156943894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156943900_156944100
ES.20548.16	chr2	-	3022	6	ISM	ENSMUSG00000027639.17	ENSMUST00000109549.3	3245	14	115	14816	2	1403	5prime_fragment	FALSE	canonical	3	195	junction_3	15.7683226755416	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTCATACTTGACCT	NA	False	NA	NA	False	NA	NA	NA	156977011	156960080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.17	chr2	-	1644	7	FSM	ENSMUSG00000027639.17	ENSMUST00000149313.8	1375	7	-267	-2	2	2	multi-exon	FALSE	canonical	1	2	junction_1	78.9887474405198	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTGTTTTTATTC	NA	False	NA	NA	False	AATAAA	-13	NA	156977124	156961481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156962312_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.18	chr2	-	1216	1	NIC	ENSMUSG00000027639.17	novel	3926	16	NA	NA	-1	-12032	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAAAAATAGGAACTCAC	NA	False	NA	NA	False	NA	NA	NA	156977014	156975798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156975800_156977000
ES.20548.2	chr2	-	2108	1	Genic_Genomic	ENSMUSG00000027639.17	novel	NA	NA	NA	NA	10401	1	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTCTCGAGTTACTGA	1865	False	NA	-4	True	ATTAAA	-19	NA	156941559	156939451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_156939500_156941600
ES.20548.3	chr2	-	3926	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-26	-1864	-26	-4	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTAGTCTCTCGAGTT	NA	False	NA	-9	True	ATTAAA	-14	NA	156977066	156939456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.5	chr2	-	2178	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	61	1687	2	181	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTAGCCTGTGGTGGTTT	NA	False	NA	NA	False	AATGAA	-27	NA	156977124	156941139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.7	chr2	-	2026	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	37	1863	-6	5	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTTAGTTCTT	NA	False	NA	0	True	AGTAAA	-23	NA	156977148	156941315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20548.8	chr2	-	4039	14	NIC	ENSMUSG00000027639.17	novel	1996	16	NA	NA	2	5	intron_retention	FALSE	canonical	0	0	junction_13	55.1585128376531	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTTAGTTCTT	NA	False	NA	0	True	AGTAAA	-23	NA	156977011	156941315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156976798
ES.20548.9	chr2	-	2124	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	-84	-4	2	4	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATCTGCGGTTAGTTCT	NA	False	NA	-1	True	AGTAAA	-22	NA	156977124	156941316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ES.20549.1	chr2	+	2137	2	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAATAAACACACACACA	NA	False	NA	NA	False	NA	NA	NA	156988957	156991140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156990104_156990149
ES.20549.2	chr2	+	2108	5	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	156988957	157004380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_156989597_156992588_156992754_156994815_156994965_157001579_157001657_157003302
ES.2055.1	chr1	-	169	1	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCCTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	180681119	180680950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180681000_180681100
ES.20550.1	chr2	+	6459	9	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157019198	157042474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_157019276_157029852_157029959_157030142_157030256_157033826_157035183_157035931_157035981_157037196_157037360_157037459_157037589_157037678_157037744_157038073
ES.20550.2	chr2	+	1078	1	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACATGCTTTCAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	157019198	157020276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_157019200_157020300
ES.20551.1	chr2	-	4888	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-26	0	-4	0	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	157046458	156987812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.10	chr2	-	2950	17	ISM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-6	17315	-6	3770	5prime_fragment	FALSE	canonical	3	55	junction_4	39.5343501748796	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTACATGTAAAATGGGTA	NA	False	NA	NA	False	NA	NA	NA	157046438	157005127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.11	chr2	-	3086	15	ISM	ENSMUSG00000027641.14	ENSMUST00000154721.8	2715	16	27	2022	5	-2022	5prime_fragment	FALSE	canonical	3	55	junction_2	35.4011991034087	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCAATGTTTCCAACT	NA	False	NA	NA	False	AATAAA	-22	NA	157046427	157010919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.12	chr2	-	3232	15	NNC	ENSMUSG00000027641.14	novel	2715	16	NA	NA	0	-2033	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	48.0399493618996	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGCCTTGAATACTCAA	NA	False	NA	NA	False	AATAAA	-11	NA	157046446	157010930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034857_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.13	chr2	-	2283	15	NNC	ENSMUSG00000027641.14	novel	2715	16	NA	NA	3	-2835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	48.0987504610917	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATGACATTGCATCAC	NA	False	NA	NA	False	CATAAA	-13	NA	157046443	157011732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041341_157041470_157046219
ES.20551.14	chr2	-	2403	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	-16	-4	-8	4	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGTATACATGTTTTT	NA	False	NA	-2	True	NA	NA	NA	157046462	157016901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.15	chr2	-	2372	13	NNC	ENSMUSG00000027641.14	novel	2383	13	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	43.50758235322	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTGTATACATGTTT	NA	False	NA	-4	True	NA	NA	NA	157046458	157016903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033851_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.16	chr2	-	2250	12	NIC	ENSMUSG00000027641.14	novel	2383	13	NA	NA	1	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	43.8660621090916	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTCATGCACAAGGACT	NA	False	NA	-17	True	NA	NA	NA	157046453	157016916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.17	chr2	-	6566	1	Intergenic	novelGene_17004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	157028455	157021889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157021900_157028500
ES.20551.18	chr2	-	1786	12	NNC	ENSMUSG00000027641.14	novel	550	2	NA	NA	1	1203	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	43.6933340226691	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAATTCTCTTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	157046431	157028979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157029243_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.2	chr2	-	6950	21	NIC	ENSMUSG00000027641.14	novel	4862	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	54	junction_1	42.6256671502042	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	157046458	156987812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156989597_156992588_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.4	chr2	-	5883	21	NIC	ENSMUSG00000027641.14	novel	4862	22	NA	NA	0	-3	intron_retention	FALSE	canonical	3	54	junction_1	43.6750500858328	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGTACTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	157046454	156987815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.5	chr2	-	5640	22	NNC	ENSMUSG00000027641.14	novel	4862	22	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.4766442162012	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGTACTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	157046389	156987815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157010962_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.7	chr2	-	4921	22	NNC	ENSMUSG00000027641.14	novel	4862	22	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.8674473625532	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAACTATTGTACT	NA	False	NA	NA	False	NA	NA	NA	157046445	156987822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037801_157038074_157038276_157041335_157041470_157046219
ES.20551.8	chr2	-	4182	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	-20	700	2	-700	multi-exon	FALSE	canonical	3	54	junction_1	43.0171615808876	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGAGTGTTTCAGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	157046452	156988512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ES.20551.9	chr2	-	2101	1	Intergenic	novelGene_17003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGATGCTCTGTACA	7628	False	NA	NA	False	NA	NA	NA	156999432	156997331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_156997300_156999400
ES.20552.1	chr2	+	180	1	Intergenic	novelGene_17005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGTACCAACAAT	NA	False	NA	NA	False	NA	NA	NA	157051862	157052042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157051900_157052000
ES.20553.1	chr2	+	155	1	Intergenic	novelGene_17006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157115443	157115598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157115400_157115600
ES.20554.1	chr2	+	2355	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-38	4	at_least_one_novel_splicesite	TRUE	canonical	3	33	junction_1	578.05134665962	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGGAGCCTTGCATGTG	NA	False	NA	21	True	AATAAA	-22	NA	157120898	157167980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.10	chr2	+	2643	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	589.412512061799	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCCTTGCATGTGTG	NA	False	NA	23	True	AATAAA	-24	NA	157120941	157167982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137416_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.11	chr2	+	4066	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	9	-6	intron_retention	FALSE	canonical	3	1870	junction_1	201.081741256303	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGTGTTGATGGAGC	NA	False	NA	11	True	AATAAA	-12	NA	157120945	157167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157163793_157167630
ES.20554.12	chr2	+	2286	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	812.034991035895	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120947	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121133_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.13	chr2	+	2345	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-25	436	17	148	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCACTTTTTGCTTCAC	NA	False	NA	NA	False	AAAAAG	-34	NA	157120953	157167803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.14	chr2	+	2562	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	578.05134665962	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTCTGTGATAAAATG	NA	False	NA	23	True	AATAAA	-20	NA	157120953	157168242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.15	chr2	+	2680	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	600.73997332919	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATTTCTTCTGTGATAA	NA	False	NA	19	True	AATAAA	-16	NA	157120957	157168238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.17	chr2	+	2328	18	NNC	ENSMUSG00000027642.16	novel	1944	17	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	857.334724859449	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTGATGGAGCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	157120967	157167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.18	chr2	+	2976	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	760.951812468867	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCATTTCTTCTGTGA	NA	False	NA	16	True	AATAAA	-13	NA	157120972	157168235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157123863_157124082_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.19	chr2	+	2482	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	590.552270654343	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120977	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136134_157137170_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.2	chr2	+	2575	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-75	256	-33	7	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGCCTTGCATGTGTGA	NA	False	NA	24	True	AATAAA	-25	NA	157120903	157167983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.20	chr2	+	5038	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	897.416260514973	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120977	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121034_157122066_157122201_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630_157167712_157167825
ES.20554.21	chr2	+	2428	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	572.966662073589	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120977	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121058_157121123_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.23	chr2	+	6321	16	ISM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	11	262	11	1	intron_retention	FALSE	canonical	3	1870	junction_1	170.821856525056	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157120989	157167977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662
ES.20554.26	chr2	+	5215	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	26	2	intron_retention	FALSE	canonical	3	1870	junction_1	188.59720747314	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGGAGCCTTGCATG	NA	False	NA	19	True	AATAAA	-20	NA	157121004	157167978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.28	chr2	+	4448	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	28	1	intron_retention	FALSE	canonical	3	1870	junction_1	201.108196418412	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121006	157167977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.29	chr2	+	2441	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	29	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	589.346128667187	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCAGTGTTGATGGAG	NA	False	NA	10	True	AATAAA	-11	NA	157121007	157167969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162121_157163682_157163793_157167630
ES.20554.30	chr2	+	2458	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	858.638110524038	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCCCAGTGTTGATGGA	NA	False	NA	9	True	AATAAA	-10	NA	157121010	157167968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136134_157137201_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.31	chr2	+	2428	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	590.252157450526	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121034	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152204_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.32	chr2	+	2484	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	760.951812468867	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121205	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157123863_157124082_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.33	chr2	+	2160	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	600.73997332919	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121215	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.35	chr2	+	1878	14	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	969.972847786878	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121222	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157123863_157124082_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156869_157167806
ES.20554.36	chr2	+	2041	15	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-122	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	618.350966981816	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121223	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.37	chr2	+	2240	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_7	576.213271606096	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121225	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141466_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.38	chr2	+	2556	18	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-120	-1	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	718.681058375563	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATTTCTTCTGTGATAA	NA	False	NA	19	True	AATAAA	-16	NA	157121225	157168238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.39	chr2	+	4491	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-120	0	intron_retention	FALSE	canonical	3	1870	junction_1	201.108196418412	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTCTTCTGTGATAAA	NA	False	NA	20	True	AATAAA	-17	NA	157121225	157168239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.40	chr2	+	6139	15	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-117	0	intron_retention	FALSE	canonical	3	1870	junction_1	193.462014412153	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121228	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157144432_157152120_157152213_157154396_157154512_157156697_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.42	chr2	+	2815	18	NNC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	762.845542557147	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121228	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121694_157122066_157122201_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.44	chr2	+	2235	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	581.246045013426	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121230	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144426_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.46	chr2	+	9635	14	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	-2	intron_retention	FALSE	canonical	2	4	junction_8	617.825534056779	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTGATGGAGCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	157121230	157167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157141580_157144325_157144432_157152090_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040
ES.20554.47	chr2	+	6970	15	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	1	intron_retention	FALSE	canonical	3	1870	junction_1	195.099922070299	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGGAGCCTTGCAT	NA	False	NA	18	True	AATAAA	-19	NA	157121230	157167977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.48	chr2	+	3632	17	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	-7	intron_retention	FALSE	canonical	3	138	junction_16	542.484792413575	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCAGTGTTGATGGAG	NA	False	NA	10	True	AATAAA	-11	NA	157121230	157167969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157165191_157167630
ES.20554.5	chr2	+	2128	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	3	139	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	578.05134665962	1442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACTTGTTTCTCACTTT	NA	False	NA	NA	False	AAAAAG	-25	NA	157120939	157167794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.50	chr2	+	2351	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	744.814405251332	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGTGTTGATGGAGC	NA	False	NA	11	True	AATAAA	-12	NA	157121230	157167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165445_157165562_157167630
ES.20554.51	chr2	+	2176	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	589.346128667187	1446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTGATGGAGCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	157121230	157167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162104_157163712_157163793_157167630
ES.20554.52	chr2	+	6215	15	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	-1	intron_retention	FALSE	canonical	3	1870	junction_1	208.149818493256	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGATGGAGCCTTGC	NA	False	NA	16	True	AATAAA	-17	NA	157121230	157167975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.54	chr2	+	2934	17	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-108	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	582.937305671673	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATTTCTTCTGTGATAA	NA	False	NA	19	True	AATAAA	-16	NA	157121237	157168238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121694_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.55	chr2	+	2770	18	NNC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	763.318061929508	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121237	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121694_157124783_157124882_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.56	chr2	+	2669	17	NIC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	582.937305671673	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121240	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121694_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.57	chr2	+	2356	17	FSM	ENSMUSG00000027642.16	ENSMUST00000127252.8	2314	17	-42	0	-42	0	multi-exon	FALSE	canonical	3	22	junction_1	580.610235953303	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121303	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157121444_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.58	chr2	+	2590	18	NNC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	764.576179045629	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTGATGGAGCCTTG	NA	False	NA	15	True	AATAAA	-16	NA	157121308	157167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121467_157123863_157124082_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.59	chr2	+	1907	1	Intergenic	novelGene_17007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	157121774	157123681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157121800_157123700
ES.20554.6	chr2	+	2797	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	-38	-3	4	3	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTCTGTGATAAAATG	NA	False	NA	23	True	AATAAA	-20	NA	157120940	157168242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.60	chr2	+	2217	16	ISM	ENSMUSG00000027642.16	ENSMUST00000127252.8	2314	17	4157	0	0	0	3prime_fragment	FALSE	canonical	3	2037	junction_7	165.421831153636	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157125502	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.61	chr2	+	2265	17	FSM	ENSMUSG00000027642.16	ENSMUST00000126248.8	1944	17	0	-321	0	0	multi-exon	FALSE	canonical	3	59	junction_15	739.834966288935	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157125502	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.62	chr2	+	1535	11	ISM	ENSMUSG00000027642.16	ENSMUST00000127252.8	2314	17	17954	6	2538	-6	3prime_fragment	FALSE	canonical	3	2037	junction_2	192.556095722779	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGTGTTGATGGAGC	3496	False	NA	11	True	AATAAA	-12	NA	157139299	157167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.63	chr2	+	4332	11	NIC	ENSMUSG00000027642.16	novel	2621	17	NA	NA	2541	0	intron_retention	FALSE	canonical	3	59	junction_9	897.699593405277	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	3499	False	NA	17	True	AATAAA	-18	NA	157139302	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157139479_157141460_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.64	chr2	+	1542	11	NNC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	2546	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	725.894730660032	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	3504	False	NA	17	True	AATAAA	-18	NA	157139307	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162031_157162117_157163662_157163793_157167630
ES.20554.65	chr2	+	4245	8	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	6136	-2	intron_retention	FALSE	canonical	2	4	junction_1	839.749185100856	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTGATGGAGCCTTG	7094	False	NA	15	True	AATAAA	-16	NA	157142897	157167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157144432_157152090_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157163793_157167630
ES.20554.66	chr2	+	2940	7	ISM	ENSMUSG00000027642.16	ENSMUST00000126248.8	1944	17	17712	4477	6453	-902	internal_fragment	FALSE	canonical	3	2085	junction_2	157.309320201386	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTTTATGTGCTGAA	7411	False	NA	NA	False	ATTAAA	-11	NA	157143214	157163178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040
ES.20554.67	chr2	+	4700	6	ISM	ENSMUSG00000027642.16	ENSMUST00000126248.8	1944	17	28894	-138	-2074	138	intron_retention	FALSE	canonical	3	2222	junction_2	78.7893393804009	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACTTGTTTCTCACTT	NA	False	NA	NA	False	AAAAAG	-24	NA	157154396	157167793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662
ES.20554.7	chr2	+	2579	18	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	718.681058375563	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120940	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ES.20554.8	chr2	+	2408	17	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	585.730790204638	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120940	157167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157121133_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ES.20554.9	chr2	+	2597	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	740.308847921878	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCCCAGTGTTGATGGA	NA	False	NA	9	True	AATAAA	-10	NA	157120941	157167968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165218_157167630
ES.20555.1	chr2	-	197	1	Intergenic	novelGene_17008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGCTTCCCCTG	-8	True	NA	NA	False	NA	NA	NA	157125129	157124932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157124900_157125100
ES.20556.1	chr2	+	1569	1	Intergenic	novelGene_17009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGTT	NA	False	NA	NA	False	NA	NA	NA	157200822	157202391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157200800_157202400
ES.20557.1	chr2	-	183	1	Intergenic	novelGene_17010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCTTCCTA	1251	False	NA	NA	False	NA	NA	NA	157203261	157203078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157203100_157203300
ES.20558.1	chr2	+	1105	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	1	1	1	-1	multi-exon	FALSE	canonical	3	219	junction_1	136	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTGTGTTGCTACT	5218	False	NA	29	True	AATAAA	-16	NA	157209514	157238682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157209561_157220968_157221175_157237829
ES.20558.2	chr2	+	3442	3	NNC	ENSMUSG00000063019.6	novel	1107	3	NA	NA	9	2347	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	230.5	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATACTGGAGAGTTCG	5226	False	NA	NA	False	NA	NA	NA	157209522	157241030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157209561_157220971_157221175_157237829
ES.20559.1	chr2	-	1134	1	Intergenic	novelGene_17011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATACATAACACATGTTC	NA	False	NA	NA	False	NA	NA	NA	157237526	157236392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157236400_157237500
ES.2056.1	chr1	-	1920	4	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATATATCCCAGAAGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	180713270	180703031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180703141_180705187_180706628_180710076_180710166_180712988
ES.2056.2	chr1	-	1875	3	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAGACTTGTAGTGAG	NA	False	NA	NA	False	AAGAAA	-1	NA	180713070	180704923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180706628_180710076_180710166_180712988
ES.2056.3	chr1	-	1741	2	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAGACTTGTAGTGAG	NA	False	NA	NA	False	AAGAAA	-1	NA	180713025	180704923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180706628_180712988
ES.20560.1	chr2	+	181	1	Intergenic	novelGene_17012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	157243702	157243883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157243700_157243900
ES.20561.1	chr2	+	3937	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-2042	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.972472476152	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGACATCGACTGTGTGT	NA	False	NA	26	True	ATTAAA	-32	NA	157258321	157313774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157258500_157281120_157281194_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.10	chr2	+	3916	13	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2113	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.3471079198211	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157262476	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.11	chr2	+	3958	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2160	-12	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGGACATCGACTGT	NA	False	NA	22	True	ATTAAA	-28	NA	157262523	157313770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.12	chr2	+	4077	16	NNC	ENSMUSG00000027646.16	novel	2020	12	NA	NA	2161	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	57.9467188218817	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157262524	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.13	chr2	+	3985	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.4672350190954	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157262582	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157281120_157281198_157282868_157282970_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.14	chr2	+	3999	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2222	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	44.3039133112852	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157262585	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.15	chr2	+	3902	15	NNC	ENSMUSG00000027646.16	novel	2020	12	NA	NA	2223	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	56.8164337393429	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCAGCAGTTTATTGG	NA	False	NA	11	True	ATTAAA	-17	NA	157262586	157313759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.17	chr2	+	4019	16	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2279	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.073849410486	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157262642	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157263520_157263636_157264713_157264794_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.18	chr2	+	3818	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-194	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.5845724450749	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTGGTCAGCAGTTT	NA	False	NA	6	True	ATTAAA	-12	NA	157265841	157313754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157265917_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.19	chr2	+	3910	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.7668338282552	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157265858	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157265917_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.20	chr2	+	4054	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	-172	24	-8	0	multi-exon	FALSE	canonical	3	53	junction_1	27.1024791983727	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266027	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.21	chr2	+	3990	15	NNC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.6110475612287	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266034	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266130_157266183_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.22	chr2	+	3934	13	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	40.2881978858435	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266070	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266335_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.23	chr2	+	4070	16	NNC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	60.3768167428526	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266118	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266335_157266763_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.24	chr2	+	1504	5	NNC	ENSMUSG00000027646.16	novel	3906	14	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	52.0240329078783	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266123	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299286_157313005
ES.20561.25	chr2	+	3945	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	-58	0	-45	0	multi-exon	FALSE	canonical	3	8	junction_5	51.505696138329	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266154	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.26	chr2	+	4027	15	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	50.7060355462378	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266157	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266335_157273529_157273636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.27	chr2	+	3951	14	NNC	ENSMUSG00000027646.16	novel	3906	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	45.0435686521736	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266165	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266335_157281120_157281198_157297510_157297688_157298958_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.28	chr2	+	4034	15	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-33	11	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	47.6961043204467	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTGGACATCGACTG	NA	False	NA	21	True	ATTAAA	-27	NA	157266166	157313769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266335_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.29	chr2	+	4436	14	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-33	0	intron_retention	FALSE	canonical	3	16	junction_1	36.0835650766253	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266166	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.3	chr2	+	3951	15	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	47.3751851000638	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157260325	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260416_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.33	chr2	+	3945	15	NNC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	48.228251945455	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266228	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266335_157266763_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.34	chr2	+	3863	14	NNC	ENSMUSG00000027646.16	novel	3906	14	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.7980410251619	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTGGTCAGCAGTTT	NA	False	NA	6	True	ATTAAA	-12	NA	157266229	157313754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266335_157266763_157266856_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.35	chr2	+	4203	13	NIC	ENSMUSG00000027646.16	novel	3906	14	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	41.6122144194333	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266319	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266856_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.36	chr2	+	4281	15	NIC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	55.5082729631083	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266339	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.37	chr2	+	3918	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	135	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.7668338282552	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157266446	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157266513_157266747_157266856_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.38	chr2	+	3835	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0953006734539	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157267002	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157267091_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.39	chr2	+	3778	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	1978	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0953006734539	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157268289	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157268327_157281125_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.4	chr2	+	3808	14	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.3236184445848	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157260364	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260433_157281120_157281194_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.40	chr2	+	4074	15	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2028	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.0467972570668	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157268339	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157268562_157273529_157273636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.41	chr2	+	3964	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2032	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0953006734539	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157268343	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157268562_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.42	chr2	+	3893	14	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	12367	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	52.1462440567944	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGGTCAGCAGTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	157278678	157313755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157278824_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304733_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.43	chr2	+	3747	13	ISM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	14919	26	14807	1	3prime_fragment	FALSE	canonical	3	121	junction_1	13.4008706184835	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGTCAGCAGTTTAT	1821	False	NA	8	True	ATTAAA	-14	NA	157281118	157313756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.44	chr2	+	9655	11	NIC	ENSMUSG00000027646.16	novel	3887	15	NA	NA	-1989	0	intron_retention	FALSE	canonical	3	126	junction_1	12.8390030765632	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157295601	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157297688_157298996_157299252_157300453_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.45	chr2	+	3227	10	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	1470	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.7410711708819	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157300474	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157300558_157304622_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.46	chr2	+	5629	8	ISM	ENSMUSG00000027646.16	ENSMUST00000109531.8	3586	12	4778	1	3364	-1	intron_retention	FALSE	canonical	3	131	junction_2	9.99183340002612	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157302368	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309
ES.20561.47	chr2	+	4582	7	NIC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	5905	8	intron_retention	FALSE	canonical	3	134	junction_2	12.0473602456675	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTATTGGACATCGA	NA	False	NA	18	True	ATTAAA	-24	NA	157304909	157313766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.5	chr2	+	3794	14	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	38.3334791181517	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260368	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260416_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.6	chr2	+	3717	13	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.6122144194333	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260368	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260416_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.7	chr2	+	3884	15	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.3849020945385	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157260369	157313758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260416_157260571_157260663_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.8	chr2	+	3906	16	NNC	ENSMUSG00000027646.16	novel	3813	14	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	59.8362951913153	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTCAGCAGTTTATT	NA	False	NA	9	True	ATTAAA	-15	NA	157260388	157313757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157260416_157263520_157263636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20561.9	chr2	+	4217	16	NNC	ENSMUSG00000027646.16	novel	3586	12	NA	NA	2108	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.073849410486	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGTCAGCAGTTTAT	NA	False	NA	8	True	ATTAAA	-14	NA	157262471	157313756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157262723_157263520_157263636_157273529_157273636_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ES.20562.1	chr2	-	2878	2	Antisense	novelGene_ENSMUSG00000027646.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTACCCTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	157261675	157257840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_157260594_157261550
ES.20563.1	chr2	+	2227	1	Intergenic	novelGene_17013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTCCACCTCCCAGTG	2649	False	NA	NA	False	NA	NA	NA	157322738	157324965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157322700_157325000
ES.20564.1	chr2	-	1645	1	Intergenic	novelGene_17014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCTTAGATGGGATG	NA	False	NA	NA	False	AATAAA	-14	NA	157383726	157382081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157382100_157383700
ES.20565.1	chr2	+	7129	1	Intergenic	novelGene_17016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAGAAAAATGCAAAAGAG	1105	False	NA	NA	False	NA	NA	NA	157390403	157397532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157390400_157397500
ES.20566.1	chr2	-	10304	1	Genic_Genomic	ENSMUSG00000087445.2	novel	NA	NA	NA	NA	-8134	966	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTACGATCTAAAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	157395523	157385219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_157385200_157395500
ES.20566.2	chr2	-	1623	2	NNC	ENSMUSG00000087445.2	novel	464	2	NA	NA	-214	949	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTCCATATGTATAAA	NA	False	NA	NA	False	AATAAA	-17	NA	157387603	157385236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157386349_157387092
ES.20566.3	chr2	-	6838	3	NNC	ENSMUSG00000087445.2	novel	464	2	NA	NA	-5785	945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATTCCATATGTA	NA	False	NA	NA	False	AATAAA	-13	NA	157393174	157385240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157385658_157386013_157386353_157387092
ES.20566.4	chr2	-	4309	2	NNC	ENSMUSG00000087445.2	novel	464	2	NA	NA	-2900	945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATTCCATATGTA	NA	False	NA	NA	False	AATAAA	-13	NA	157390289	157385240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157386349_157387088
ES.20566.5	chr2	-	3383	2	Intergenic	novelGene_17015	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATATATCATGTATAA	NA	False	NA	NA	False	AATATA	-17	NA	157393557	157385258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157385542_157390457
ES.20567.1	chr2	+	2908	1	Genic_Genomic	ENSMUSG00000067786.17	novel	NA	NA	NA	NA	-2121	-508	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAACAAAGAAACGAA	7140	False	NA	NA	False	GATAAA	-11	NA	157399876	157402784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_157399900_157402800
ES.20567.2	chr2	+	2352	2	NNC	ENSMUSG00000067786.17	novel	1448	3	NA	NA	-2121	-508	intron_retention	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAACAAAGAAACGAA	7140	False	NA	NA	False	GATAAA	-11	NA	157399876	157402784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157400046_157400601
ES.20568.1	chr2	-	2092	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	-37	1	-13	-1	multi-exon	FALSE	canonical	3	207	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGTTTTATGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	157408294	157398282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157400248_157408167
ES.20568.2	chr2	-	2079	2	FSM	ENSMUSG00000067787.11	ENSMUST00000088494.3	2108	2	28	1	-2	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGTTTTATGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	157408253	157398282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157400248_157408139
ES.20568.3	chr2	-	2064	2	NNC	ENSMUSG00000067787.11	novel	2108	2	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	0	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGTTTTATGTGGC	NA	False	NA	-13	True	AATAAA	-15	NA	157408279	157398282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157400248_157408180
ES.20569.1	chr2	-	158	1	Intergenic	novelGene_17017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3448	False	NA	NA	False	NA	NA	NA	157422237	157422079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157422100_157422200
ES.2057.1	chr1	-	129	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATATATCTTTATA	NA	False	NA	NA	False	AATAAA	-13	NA	180717472	180717343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180717300_180717500
ES.20570.1	chr2	-	169	1	Intergenic	novelGene_17018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATATTCAGAATTGA	NA	False	NA	-7	True	NA	NA	NA	157433945	157433776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157433800_157433900
ES.20571.1	chr2	+	172	1	Intergenic	novelGene_17019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAATTACCCATACAC	NA	False	NA	NA	False	NA	NA	NA	157437940	157438112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157437900_157438100
ES.20572.1	chr2	-	2594	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	1800	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTCCTGGTCATGA	8707	False	NA	NA	False	NA	NA	NA	157439240	157435702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157438071_157439014
ES.20572.2	chr2	-	1003	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-374	0	374	multi-exon	FALSE	canonical	3	113	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACTATAATTTTGCTAC	8707	False	NA	NA	False	NA	NA	NA	157439240	157437128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157437906_157439014
ES.20572.4	chr2	-	518	2	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	82	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTGGTGGGAAGAAAG	8707	False	NA	-2	True	AATAAA	-19	NA	157439240	157437420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157437906_157439207
ES.20572.5	chr2	-	708	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	-79	0	79	multi-exon	FALSE	canonical	3	113	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCTGTGGTGGGAAGA	8707	False	NA	-5	True	AATAAA	-16	NA	157439240	157437423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157437906_157439014
ES.20572.6	chr2	-	467	3	NNC	ENSMUSG00000087547.2	novel	629	2	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	52.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGCCAAATATGTATGT	8707	False	NA	-8	True	NA	NA	NA	157439240	157437497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157437906_157439014_157439041_157439207
ES.20572.7	chr2	-	144	1	ISM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	1594	0	-1594	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGTATTGCCTGTTGAT	8707	False	NA	NA	False	NA	NA	NA	157439240	157439096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_157439100_157439200
ES.20573.1	chr2	+	133	1	Intergenic	novelGene_17020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157439370	157439503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157439400_157439500
ES.20574.1	chr2	-	181	1	Intergenic	novelGene_17021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	157479673	157479492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157479500_157479700
ES.20575.1	chr2	+	183	1	Intergenic	novelGene_17022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGACAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	157493533	157493716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157493500_157493700
ES.20576.1	chr2	-	3823	1	Intergenic	novelGene_17023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	3294	False	NA	NA	False	NA	NA	NA	157498038	157494215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157494200_157498000
ES.20576.2	chr2	-	2609	2	Intergenic	novelGene_17024	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	3294	False	NA	NA	False	NA	NA	NA	157498038	157494218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157496641_157497851
ES.20577.1	chr2	+	4303	5	Intergenic	novelGene_17025	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.34520787991171	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTATTTTATGT	NA	False	NA	NA	False	TTTAAA	-8	NA	157515701	157524535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516203_157516924_157518583_157519235_157519341_157521901_157522001_157522595
ES.20577.10	chr2	+	3076	3	Intergenic	novelGene_17034	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTATTTTATGT	NA	False	NA	NA	False	TTTAAA	-8	NA	157518245	157524535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157518583_157519235_157519341_157521901
ES.20577.11	chr2	+	3022	5	Intergenic	novelGene_17035	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	2.06155281280883	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTATTTTATGT	NA	False	NA	NA	False	TTTAAA	-8	NA	157518533	157524535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157518583_157519235_157519341_157519443_157519576_157520359_157520462_157521901
ES.20577.12	chr2	+	1562	5	Intergenic	novelGene_17036	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.73205080756888	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTTTATATGCGTG	NA	False	NA	NA	False	TTTAAA	-28	NA	157518897	157524555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157518922_157519235_157519341_157519443_157519717_157521901_157522001_157523494
ES.20577.2	chr2	+	7344	3	Intergenic	novelGene_17026	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATTTTATGTATGT	NA	False	NA	NA	False	TTTAAA	-12	NA	157515862	157524539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516245_157516924_157518583_157519235
ES.20577.3	chr2	+	4442	5	Intergenic	novelGene_17027	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.34520787991171	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGGCTGTAATTTCCA	NA	False	NA	NA	False	AATAAA	-13	NA	157516055	157524986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516245_157516924_157518583_157519235_157519341_157521901_157522001_157522595
ES.20577.4	chr2	+	3237	7	Intergenic	novelGene_17028	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.13138237134266	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGGCTGTAATTTCC	NA	False	NA	NA	False	AATAAA	-12	NA	157516556	157524985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516673_157516924_157517036_157518439_157518583_157519235_157519341_157519443_157519717_157521901_157522001_157522595
ES.20577.5	chr2	+	3449	7	Intergenic	novelGene_17029	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_5	2.5603819159562	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTATTTTATGT	NA	False	NA	NA	False	TTTAAA	-8	NA	157516713	157524535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516747_157516924_157517036_157518439_157518583_157519235_157519341_157519443_157520462_157521901_157522001_157522595
ES.20577.6	chr2	+	2546	7	Intergenic	novelGene_17030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	2.98607881119482	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTATTTTATGT	NA	False	NA	NA	False	TTTAAA	-8	NA	157516717	157524535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516747_157516924_157517036_157518439_157518583_157519235_157519341_157519443_157520462_157521901_157522001_157523494
ES.20577.7	chr2	+	4874	4	Intergenic	novelGene_17031	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.69967317119759	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGCTGTAATTTCCAC	NA	False	NA	NA	False	AATAAA	-14	NA	157516721	157524987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157516747_157516924_157518583_157519235_157519341_157521901
ES.20577.8	chr2	+	5130	4	Intergenic	novelGene_17032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	0.816496580927726	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGCTGTAATTTCCAC	NA	False	NA	NA	False	AATAAA	-14	NA	157516775	157524987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157518583_157519235_157519341_157519443_157519576_157521901
ES.20577.9	chr2	+	5091	3	Intergenic	novelGene_17033	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTTATGTATGTGT	NA	False	NA	NA	False	TTTAAA	-14	NA	157518202	157524541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157518583_157519235_157522001_157522595
ES.20578.1	chr2	+	1913	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	11	518	11	-518	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGACATTGTATGTGTA	NA	False	NA	19	True	ATTAAA	-19	NA	157579331	157733016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.12	chr2	+	1277	1	NIC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	62	-67993	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCAAAACCAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	157579382	157580659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157579400_157580700
ES.20578.14	chr2	+	1837	16	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	78	-524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	147.964620395853	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGGGCTGACATTGTA	NA	False	NA	13	True	ATTAAA	-13	NA	157579398	157733010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631046_157641343_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.16	chr2	+	1793	16	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	25334	-525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.671272654948	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGGGGCTGACATTGT	NA	False	NA	12	True	ATTAAA	-12	NA	157604654	157733009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157604690_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.17	chr2	+	3471	1	Intergenic	novelGene_17038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGTAGCATAT	NA	False	NA	NA	False	AATAAA	-13	NA	157625288	157628759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157625300_157628800
ES.20578.18	chr2	+	1040	9	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	80352	525	27889	-525	3prime_fragment	FALSE	canonical	3	501	junction_2	44.7141965711115	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGGGGCTGACATTGT	NA	False	NA	12	True	ATTAAA	-12	NA	157659672	157733009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.19	chr2	+	626	6	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	50929	-525	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	238.579462653431	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGGGGCTGACATTGT	NA	False	NA	12	True	ATTAAA	-12	NA	157682712	157733009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157682764_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.20	chr2	+	2548	1	Intergenic	novelGene_17040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAGTACAAATATCCTA	NA	False	NA	NA	False	NA	NA	NA	157694436	157696984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157694400_157697000
ES.20578.21	chr2	+	697	6	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	66566	-524	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	238.180603744302	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGGGCTGACATTGTA	NA	False	NA	13	True	ATTAAA	-13	NA	157698349	157733010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157698471_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.22	chr2	+	2880	1	NIC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	98346	-525	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGGGGCTGACATTGT	NA	False	NA	12	True	ATTAAA	-12	NA	157730129	157733009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157730100_157733000
ES.20578.4	chr2	+	2692	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	38	-288	38	288	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGTCCTGGTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	157579358	157733822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.5	chr2	+	2424	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	38	-20	38	20	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCTTCCCACAGAATT	NA	False	NA	NA	False	GGGGCT	-45	NA	157579358	157733554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.6	chr2	+	4598	15	NIC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	38	-516	intron_retention	FALSE	canonical	3	501	junction_9	44.64651413593	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACATTGTATGTGTAAG	NA	False	NA	21	True	ATTAAA	-21	NA	157579358	157733018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157713109_157726052_157726191_157726347_157726421_157732824
ES.20578.7	chr2	+	3244	4	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	38	99796	38	-14914	5prime_fragment	FALSE	canonical	3	527	junction_3	51.0751080925598	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTTCAATTTTTAATC	NA	False	NA	NA	False	AATAAA	-16	NA	157579358	157633738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911
ES.20579.1	chr2	-	177	2	Antisense	novelGene_ENSMUSG00000027649.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAACATGGAAACACACC	NA	False	NA	NA	False	NA	NA	NA	157613592	157587132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_157587140_157613422
ES.20579.2	chr2	-	229	1	Intergenic	novelGene_17037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	157613594	157613365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157613400_157613600
ES.2058.1	chr1	+	2375	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	-3122	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCGAGTCATCGAGTG	NA	False	NA	24	True	AATAAA	-22	NA	180717550	180726671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180717558_180720780_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.10	chr1	+	1793	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAGAGCGAGTCAT	NA	False	NA	18	True	AATAAA	-16	NA	180720672	180726665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180725930_180726606
ES.2058.11	chr1	+	5076	3	ISM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	3	2	-3	intron_retention	FALSE	canonical	3	1252	junction_1	34.5	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAGAGCGAGTCAT	NA	False	NA	18	True	AATAAA	-16	NA	180720674	180726665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180720999_180721699_180721947_180722160
ES.2058.12	chr1	+	2372	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	99	2	-99	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTATTGTTTTGAAT	NA	False	NA	9	True	NA	NA	NA	180720674	180726569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.14	chr1	+	4201	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	-1730	2	1730	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCACAGAGACTAGTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	180720674	180728398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.15	chr1	+	3381	2	FSM	ENSMUSG00000066652.6	ENSMUST00000155546.2	422	2	-1348	-1611	2	-5	multi-exon	FALSE	canonical	3	1148	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGGAGAGAGCGAGTC	NA	False	NA	16	True	AATAAA	-14	NA	180720674	180726663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180722407_180725014
ES.2058.16	chr1	+	1245	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	1226	2	390	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTACAGTCTTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	180720674	180725442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.17	chr1	+	2322	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTTGGAGTATCA	NA	False	NA	-22	True	NA	NA	NA	180720674	180726625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180725930_180726035
ES.2058.19	chr1	+	5468	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	2	-2997	2	2997	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	180720674	180729665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.2	chr1	+	2435	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	-570	608	-570	-608	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTCAGATTAATGTTTG	NA	False	NA	25	True	NA	NA	NA	180720102	180726060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.20	chr1	+	2482	4	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	586.2189579557	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720674	180726668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180721010_180721699_180721947_180722160_180722407_180725014
ES.2058.21	chr1	+	2407	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720674	180726668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180726102_180726165
ES.2058.22	chr1	+	6472	3	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	3787	intron_retention	FALSE	canonical	3	1148	junction_2	52	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAGCTTTCTACTGAAC	NA	False	NA	NA	False	NA	NA	NA	180720674	180730455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180720999_180721699_180722407_180725014
ES.2058.23	chr1	+	2675	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGTCAGTGTCTGT	NA	False	NA	19	True	NA	NA	NA	180720674	180726977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180725105_180725209
ES.2058.24	chr1	+	2417	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAGAGCGAGTCAT	NA	False	NA	18	True	AATAAA	-16	NA	180720674	180726665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180725187_180725237
ES.2058.25	chr1	+	7731	1	Genic_Genomic	ENSMUSG00000066652.6	novel	NA	NA	NA	NA	2	1737	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTAGTCCTTTGAATC	NA	False	NA	NA	False	AATAAA	-33	NA	180720674	180728405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_180720700_180728400
ES.2058.26	chr1	+	5479	1	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	2	-515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	944	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATTGAAGTTATGAAATA	NA	False	NA	NA	False	AATAGA	-30	NA	180720674	180726153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180720700_180726200
ES.2058.27	chr1	+	2049	3	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	6	-632	intron_retention	FALSE	canonical	3	1148	junction_2	52	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAATAACTTTGC	NA	False	NA	1	True	NA	NA	NA	180720678	180726036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180720999_180721699_180722407_180725014
ES.2058.28	chr1	+	3165	3	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	6	-3	intron_retention	FALSE	canonical	3	1148	junction_2	86.5	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAGAGCGAGTCAT	NA	False	NA	18	True	AATAAA	-16	NA	180720678	180726665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180721947_180722160_180722407_180725014
ES.2058.3	chr1	+	2626	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	-150	-3	-150	3	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCGAGTCATCGAGTG	NA	False	NA	24	True	AATAAA	-22	NA	180720522	180726671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.31	chr1	+	2496	3	ISM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	987	-309	-363	309	3prime_fragment	FALSE	canonical	3	1148	junction_2	86.5	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGTCAGTGTCTGT	NA	False	NA	19	True	NA	NA	NA	180721659	180726977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180721947_180722160_180722407_180725014
ES.2058.32	chr1	+	918	2	Fusion	ENSMUSG00000038793.9_ENSMUSG00000066652.6	novel	422	2	NA	NA	255	0	multi-exon	FALSE	canonical	3	702	junction_1	0	1579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180722277	180765965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_180722407_180765176
ES.2058.33	chr1	+	2301	8	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-5103	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	396.267895366202	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTAGCCCAGGCTGAC	417	False	NA	43	True	NA	NA	NA	180726754	180735664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180727164_180731556_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.34	chr1	+	1485	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	-32	127	-32	-126	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTTGCAGGTGG	4546	False	NA	16	True	ATTAAA	-19	NA	180731825	180735526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.35	chr1	+	2112	6	ISM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	-15	6	-15	-5	intron_retention	FALSE	canonical	3	1025	junction_3	54.0540470270266	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTTCTAGTCTCACT	1	True	NA	26	True	NA	NA	NA	180731842	180735647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354
ES.2058.37	chr1	+	3066	4	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1025	junction_1	62.6968012652072	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	11	False	NA	31	True	NA	NA	NA	180731852	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180733619_180733727_180734253_180734354_180734519_180735041
ES.2058.38	chr1	+	3174	3	NIC	ENSMUSG00000026520.9	novel	2717	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1158	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	12	False	NA	31	True	NA	NA	NA	180731853	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180734253_180734354_180734519_180735041
ES.2058.4	chr1	+	2332	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	-43	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAGGGAGAGAGCGA	NA	False	NA	13	True	AATAAA	-11	NA	180720629	180726660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180726029_180726204
ES.2058.40	chr1	+	3581	2	ISM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	1	1	1	0	intron_retention	FALSE	canonical	3	1107	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	17	False	NA	31	True	NA	NA	NA	180731858	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180732096_180732308
ES.2058.41	chr1	+	1787	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	1025	junction_2	55.9092121210807	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTCTAGTCTCACTG	17	False	NA	27	True	NA	NA	NA	180731858	180735648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.42	chr1	+	1687	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1107	junction_1	28.9205809070288	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	17	False	NA	31	True	NA	NA	NA	180731858	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180732380_180733438_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.43	chr1	+	2637	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1025	junction_2	56.3183806585381	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	17	False	NA	31	True	NA	NA	NA	180731858	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.44	chr1	+	1205	6	ISM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	1	897	1	289	5prime_fragment	FALSE	canonical	3	1025	junction_3	54.0540470270266	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTGACTGGCTTCAAA	17	False	NA	NA	False	NA	NA	NA	180731858	180734756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354
ES.2058.46	chr1	+	2950	4	NIC	ENSMUSG00000026520.9	novel	2717	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	1107	junction_1	24.0416305603426	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	23	False	NA	31	True	NA	NA	NA	180731864	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180734253_180734354_180734519_180735041
ES.2058.47	chr1	+	1987	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	10	-417	-6	417	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTGTCTTGGGCTTG	26	False	NA	NA	False	NA	NA	NA	180731867	180736070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.48	chr1	+	1778	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	1025	junction_3	48.6399013156894	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTAGTCTCACTGTGT	26	False	NA	30	True	NA	NA	NA	180731867	180735651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180734253_180734354_180734519_180735041
ES.2058.49	chr1	+	1869	5	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-4	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	488.108274361335	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTCTAGTCTCACTGT	28	False	NA	28	True	NA	NA	NA	180731869	180735649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733734_180734519_180735041
ES.2058.5	chr1	+	2830	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	-43	-314	-43	314	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGTGTCTGTTTATT	NA	False	NA	24	True	NA	NA	NA	180720629	180726982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.50	chr1	+	1987	4	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1107	junction_1	22.573337271116	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTAGTCTCACTGTGT	28	False	NA	30	True	NA	NA	NA	180731869	180735651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180732380_180733438_180734519_180735041
ES.2058.51	chr1	+	1817	6	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_1	445.75347446767	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	29	False	NA	31	True	NA	NA	NA	180731870	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180732137_180732308_180732380_180733438_180733619_180733727_180734253_180734354_180734519_180735041
ES.2058.53	chr1	+	3671	2	NIC	ENSMUSG00000026520.9	novel	2717	5	NA	NA	6	0	intron_retention	FALSE	canonical	3	1158	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	38	False	NA	31	True	NA	NA	NA	180731879	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180734253_180734354
ES.2058.56	chr1	+	2187	3	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1114	junction_1	22	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	42	False	NA	31	True	NA	NA	NA	180731883	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732380_180733438_180734519_180735041
ES.2058.57	chr1	+	1868	5	NIC	ENSMUSG00000026520.9	novel	2717	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1107	junction_1	23.878599205146	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTAGTCTCACTGTGTA	46	False	NA	31	True	NA	NA	NA	180731887	180735652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180732380_180733438_180734253_180734354_180734519_180735041
ES.2058.58	chr1	+	1596	7	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	421.100014512256	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCACTGTGTAGCCCAG	46	False	NA	37	True	NA	NA	NA	180731887	180735658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180732137_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ES.2058.6	chr1	+	5012	3	ISM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	-36	105	-36	-105	intron_retention	FALSE	canonical	3	1252	junction_1	34.5	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGATGTGGGTATTGTT	NA	False	NA	3	True	NA	NA	NA	180720636	180726563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180720999_180721699_180721947_180722160
ES.2058.60	chr1	+	3132	5	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_2	60.4043665640159	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	46	False	NA	32	True	NA	NA	NA	180731887	180735653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180733619_180733727_180733950_180734159_180734253_180734354
ES.2058.61	chr1	+	2280	5	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1025	junction_3	48.0364444979018	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTAGTCTCACTGTGT	47	False	NA	30	True	NA	NA	NA	180731888	180735651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180734253_180734354
ES.2058.62	chr1	+	190	1	ISM	ENSMUSG00000026520.9	ENSMUST00000194253.2	2717	5	717	2858	717	-1390	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGTCTGCTTTGAATT	763	False	NA	NA	False	NA	NA	NA	180732604	180732794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180732600_180732800
ES.2058.63	chr1	+	1635	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	-15	0	-15	0	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762571	180765965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
ES.2058.64	chr1	+	1817	3	NIC	ENSMUSG00000038793.9	novel	1620	4	NA	NA	18	0	intron_retention	FALSE	canonical	3	245	junction_1	10	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762604	180765965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180762925_180764111_180764820_180765176
ES.2058.65	chr1	+	1426	4	NNC	ENSMUSG00000038793.9	novel	1620	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	119.074206554848	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762605	180765965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180762925_180764111_180764359_180764748_180764820_180765176
ES.2058.67	chr1	+	2788	3	NIC	ENSMUSG00000038793.9	novel	1620	4	NA	NA	19	0	intron_retention	FALSE	canonical	3	187	junction_1	39	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762605	180765965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180764359_180764573_180764820_180765176
ES.2058.7	chr1	+	1688	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	785	0	-785	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTCTGCCCTGGTGAA	NA	False	NA	-81	True	NA	NA	NA	180720672	180725883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ES.2058.8	chr1	+	2733	5	NNC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	0	311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	540.598915555701	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTCAGTGTCTGTTT	NA	False	NA	21	True	NA	NA	NA	180720672	180726979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014_180725187_180725237
ES.2058.9	chr1	+	2687	3	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1148	junction_2	52	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720672	180726668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180720999_180721699_180722407_180725014
ES.20580.1	chr2	-	226	1	Intergenic	novelGene_17039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATGAACACCCACAGTC	NA	False	NA	NA	False	NA	NA	NA	157662603	157662377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157662400_157662600
ES.20581.1	chr2	-	5661	2	Antisense	novelGene_ENSMUSG00000027649.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACTATATATACCAA	NA	False	NA	NA	False	NA	NA	NA	157693891	157685842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_157691310_157693697
ES.20582.1	chr2	-	181	1	Intergenic	novelGene_17041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157697896	157697715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157697700_157697900
ES.20583.1	chr2	+	367	1	FSM	ENSMUSG00000062846.8	ENSMUST00000121302.2	477	1	305	-195	305	195	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	6303	False	NA	NA	False	AGTAAA	-16	NA	157743760	157744127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157743800_157744100
ES.20583.2	chr2	+	441	1	Intergenic	novelGene_17042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGAACAAATGAGTGT	6574	False	NA	NA	False	AATAAA	-42	NA	157744031	157744472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157744000_157744500
ES.20584.1	chr2	+	3302	3	NIC	ENSMUSG00000037843.7	novel	1363	4	NA	NA	-243	0	intron_retention	FALSE	canonical	3	14	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGCAGTGCCTTGCTGA	NA	False	NA	5	True	AATAAA	-15	NA	157756329	157786639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157756852_157777244_157779162_157785776
ES.20584.2	chr2	+	1336	3	NIC	ENSMUSG00000037843.7	novel	1363	4	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGGCAGTGCCTTGCT	NA	False	NA	3	True	AATAAA	-13	NA	157756546	157786637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157756852_157777244_157777415_157785776
ES.20584.3	chr2	+	1368	4	FSM	ENSMUSG00000037843.7	ENSMUST00000109523.2	1363	4	-7	2	-7	-2	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGGCAGTGCCTTGCT	NA	False	NA	3	True	AATAAA	-13	NA	157756565	157786637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157756852_157777244_157777415_157779110_157779162_157785776
ES.20585.1	chr2	-	191	1	Intergenic	novelGene_17043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTCAGTGTGACAAA	NA	False	NA	NA	False	NA	NA	NA	157770957	157770766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157770800_157771000
ES.20586.1	chr2	-	156	1	Intergenic	novelGene_17044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	6718	False	NA	NA	False	NA	NA	NA	157787545	157787389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_157787400_157787500
ES.20587.1	chr2	+	156	1	Intergenic	novelGene_17045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	157853627	157853783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157853600_157853800
ES.20588.1	chr2	+	3544	6	NIC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-54	-887	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.3452370108182	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870362	157919240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.10	chr2	+	3612	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	-26	-891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.4548190229973	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCTGTGATGTTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	157870390	157919236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892033_157892134_157900571_157900748_157916849
ES.20588.11	chr2	+	3530	6	NNC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-26	-890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.5783685246773	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTGATGTTTCTTC	NA	False	NA	7	True	AATAAA	-18	NA	157870390	157919237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157900554_157900748_157916849
ES.20588.12	chr2	+	5438	8	NNC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	-24	-894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	80.063750109726	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157870392	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157914449_157916251_157916849
ES.20588.13	chr2	+	3466	6	NIC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-23	-888	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	71.2488596399971	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGATGTTTCTTCTC	NA	False	NA	9	True	AATAAA	-20	NA	157870393	157919239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157916849
ES.20588.15	chr2	+	3595	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	-11	-894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.8874566435883	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157870405	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157908748_157908853_157916849
ES.20588.16	chr2	+	3649	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	-11	-890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.1029474431307	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTGATGTTTCTTC	NA	False	NA	7	True	AATAAA	-18	NA	157870405	157919237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900547_157900748_157916849
ES.20588.18	chr2	+	3723	8	FSM	ENSMUSG00000027651.17	ENSMUST00000109518.8	4399	8	-214	890	-10	-890	multi-exon	FALSE	canonical	2	5	junction_6	76.3520310997764	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTGATGTTTCTTC	NA	False	NA	7	True	AATAAA	-18	NA	157870406	157919237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
ES.20588.19	chr2	+	3190	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	-9	1323	-9	-1323	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTCCAGCAGATTTCC	NA	False	NA	NA	False	AATGAA	-18	NA	157870407	157918804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.2	chr2	+	3664	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-268	887	-44	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870372	157919240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.20	chr2	+	3583	7	NIC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	-4	-894	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	81.3376023469807	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157870412	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
ES.20588.22	chr2	+	3310	5	NIC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	3	-888	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	80.9891968104389	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGATGTTTCTTCTC	NA	False	NA	9	True	AATAAA	-20	NA	157870419	157919239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157916849
ES.20588.23	chr2	+	3743	8	NNC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	3	-890	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.9476538113488	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGTGATGTTTCTTC	NA	False	NA	7	True	AATAAA	-18	NA	157870419	157919237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157878688_157878818_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.24	chr2	+	4505	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	6	-7	-5	7	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCAGCTTTTGTGACCT	NA	False	NA	NA	False	AATAAA	-43	NA	157870422	157920134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.26	chr2	+	5434	7	NNC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-2	-893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2218436483429	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACATTCTGTGATGTTTC	NA	False	NA	4	True	AATAAA	-15	NA	157870425	157919234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157872795_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.27	chr2	+	3447	6	NNC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-2	-894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.5899464214653	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157870425	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892033_157892134_157900571_157900748_157916849
ES.20588.28	chr2	+	3715	8	NNC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	-2	-887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	79.4080137836303	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870425	157919240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157908748_157908853_157916849
ES.20588.29	chr2	+	3590	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	2	-894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	68.6796104305265	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157870429	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900741_157916849
ES.20588.32	chr2	+	4317	8	NIC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	76.6055361136864	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCTGTGTCCCAG	NA	False	NA	NA	False	AATAAA	-31	NA	157870694	157920122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
ES.20588.33	chr2	+	4369	5	NIC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	5713	-894	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	75.2840454545317	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157876431	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157916849
ES.20588.34	chr2	+	2687	4	NNC	ENSMUSG00000027651.17	novel	4179	6	NA	NA	-2	-894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.5096679918781	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157889876	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157889949_157892006_157892134_157908748_157908853_157916849
ES.20588.35	chr2	+	2688	3	ISM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	21365	894	2127	-894	3prime_fragment	FALSE	canonical	3	158	junction_2	10.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATTCTGTGATGTTT	NA	False	NA	3	True	AATAAA	-14	NA	157892005	157919233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_157892134_157900571_157900748_157916849
ES.20588.36	chr2	+	8973	2	NNC	ENSMUSG00000027651.17	novel	428	4	NA	NA	22531	1334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAGGCTGTATACTGT	NA	False	NA	NA	False	NA	NA	NA	157912409	157921461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157921338_157921416
ES.20588.37	chr2	+	5157	1	NIC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	24205	-887	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157914083	157919240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157914100_157919200
ES.20588.38	chr2	+	3819	1	NIC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	26421	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAAGATCTCCTGTGTC	1623	False	NA	NA	False	AATAAA	-27	NA	157916299	157920118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_157916300_157920100
ES.20588.39	chr2	+	8587	2	NNC	ENSMUSG00000027651.17	novel	4179	6	NA	NA	26818	12210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACAATCTCTTTGTTTG	2020	False	NA	NA	False	AATAAA	-12	NA	157916696	157932337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157924039_157931092
ES.20588.4	chr2	+	3672	7	NNC	ENSMUSG00000027651.17	novel	4283	7	NA	NA	-44	-889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	66.1448326695963	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTGATGTTTCTTCT	NA	False	NA	8	True	AATAAA	-19	NA	157870372	157919238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878056_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.5	chr2	+	1648	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-266	2901	-42	239	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCATGTCTCTTGCCA	NA	False	NA	NA	False	NA	NA	NA	157870374	157917226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ES.20588.9	chr2	+	3774	7	NNC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	-26	-893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.1482605053094	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACATTCTGTGATGTTTC	NA	False	NA	4	True	AATAAA	-15	NA	157870390	157919234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_157870966_157877915_157878046_157885325_157885597_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ES.20589.1	chr2	-	4153	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	22	-345	22	345	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGCTTGATTTCATTT	NA	False	NA	NA	False	NA	NA	NA	157870331	157823377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.10	chr2	-	3901	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.597019034417	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGAGAGATTTATTTC	NA	False	NA	-9	True	NA	NA	NA	157870331	157823723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835573_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.11	chr2	-	5705	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	25	-1	intron_retention	FALSE	canonical	0	0	junction_4	86.5273343622507	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGAGAGATTTATTTC	NA	False	NA	-9	True	NA	NA	NA	157870328	157823723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838494_157838574_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.13	chr2	-	5763	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	41	-2	intron_retention	FALSE	canonical	0	0	junction_7	95.8159042121923	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157870312	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157829748_157829804_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157845584_157845684_157848938_157851279_157870293
ES.20589.15	chr2	-	1592	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	3463	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.907268137679	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157845669	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838494_157838574_157838996_157839146_157842539_157842729_157845584
ES.20589.16	chr2	-	3883	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.6339964414336	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157870329	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838494_157838574_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.17	chr2	-	8908	1	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	16500	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157832632	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157823700_157832600
ES.20589.18	chr2	-	3992	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.3474955170573	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157870325	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157853024_157853217_157870293
ES.20589.2	chr2	-	4129	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	-291	-8	-291	8	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATTTCTTCATTTTT	NA	False	NA	0	True	NA	NA	NA	157870644	157823714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.21	chr2	-	3268	7	NNC	ENSMUSG00000027650.13	novel	3765	7	NA	NA	500	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.4379934971598	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157850782	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837434_157838992_157839146_157842539_157842729_157848938
ES.20589.22	chr2	-	3604	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	35	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	71.5326265886181	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157870318	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157848938_157851279_157870293
ES.20589.23	chr2	-	3912	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.3474955170573	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATGAGAGATTTATTT	NA	False	NA	-10	True	NA	NA	NA	157870328	157823724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157854091_157854201_157870293
ES.20589.24	chr2	-	4482	7	NNC	ENSMUSG00000027650.13	novel	3765	7	NA	NA	-942	4	intron_retention	FALSE	canonical	0	0	junction_6	94.1429173591348	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGATGAGAGATTTA	NA	False	NA	-13	True	NA	NA	NA	157850074	157823727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157845584_157845684_157848938
ES.20589.26	chr2	-	3510	4	NIC	ENSMUSG00000027650.13	novel	3765	7	NA	NA	6435	0	intron_retention	FALSE	canonical	3	187	junction_2	8.9566858950296	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTTGATGAGAGA	NA	False	NA	-17	True	NA	NA	NA	157842697	157823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157824381_157834887_157837442_157838996_157839146_157842539
ES.20589.28	chr2	-	3619	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.2573018990037	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTTGATGAGAGA	NA	False	NA	-17	True	NA	NA	NA	157870324	157823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835308_157837300_157837442_157838996_157839144_157842539_157842729_157848938_157851279_157870293
ES.20589.3	chr2	-	5651	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	176	junction_6	11.066716867356	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870352	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.30	chr2	-	2461	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.5434466716743	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAATGTCTTGATGAGA	NA	False	NA	-19	True	NA	NA	NA	157870325	157823733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157849949_157870293
ES.20589.31	chr2	-	6288	8	NNC	ENSMUSG00000027650.13	novel	774	4	NA	NA	22	5632	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.2286402602728	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGCCTGTGCCCAGTG	NA	False	NA	NA	False	AATAAA	-26	NA	157870331	157831567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157834706_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.32	chr2	-	3426	8	NNC	ENSMUSG00000027650.13	novel	774	4	NA	NA	25	5627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6106567437729	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGAAGCCTGTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	157870328	157831572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157831852_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.33	chr2	-	4391	8	NNC	ENSMUSG00000027650.13	novel	774	4	NA	NA	25	3738	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.2286402602728	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCCGGTCTGCTTTTCC	NA	False	NA	NA	False	AAAACA	-30	NA	157870328	157833461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157834706_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.34	chr2	-	3957	8	NNC	ENSMUSG00000027650.13	novel	774	4	NA	NA	26	3305	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.2286402602728	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTTGCAATTCT	NA	False	NA	NA	False	TATAAA	-44	NA	157870327	157833894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157834706_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.35	chr2	-	2379	1	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	31	-17254	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCAAGGGTTGGCCCCA	NA	False	NA	NA	False	NA	NA	NA	157870322	157867943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157867900_157870300
ES.20589.4	chr2	-	5843	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_4	97.5646420328594	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870318	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838494_157838622_157838996_157839146_157842539_157842729_157845584_157845684_157848938_157851279_157870293
ES.20589.5	chr2	-	5734	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_6	89.4586895883074	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870331	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157862998_157863103_157870293
ES.20589.6	chr2	-	3904	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.4594774426488	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870328	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157845584_157845684_157848938_157851279_157870293
ES.20589.7	chr2	-	7182	6	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	25	0	intron_retention	FALSE	canonical	3	176	junction_5	11.6516093309036	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870328	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157824381_157834887_157834976_157835273_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.8	chr2	-	5676	8	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	31	0	intron_retention	FALSE	canonical	1	1	junction_1	86.2433670918926	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870322	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157829748_157829804_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ES.20589.9	chr2	-	3912	9	NNC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.3474955170573	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870331	157823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157862998_157863103_157870293
ES.2059.1	chr1	-	3190	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAGCAGAAATAACTC	NA	False	NA	NA	False	NA	NA	NA	180721990	180718800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180718800_180722000
ES.2059.2	chr1	-	2703	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTGTTTTTATTA	NA	False	NA	NA	False	TATAAA	-6	NA	180722368	180719665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180719700_180722400
ES.20590.1	chr2	-	2646	1	Genic_Genomic	ENSMUSG00000100860.2	novel	NA	NA	NA	NA	20301	1516	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	157913416	157910770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_157910800_157913400
ES.20591.1	chr2	+	3910	2	Antisense	novelGene_ENSMUSG00000037820.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATTGTACCTAAGGG	NA	False	NA	NA	False	NA	NA	NA	157960833	157965884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_157960902_157962042
ES.20592.1	chr2	+	2987	1	Intergenic	novelGene_17046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCAATGATCCAGGAAAG	NA	False	NA	NA	False	CATAAA	-45	NA	157976590	157979577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_157976600_157979600
ES.20593.1	chr2	-	3651	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	-51	-4	-51	4	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTGTCCTTTGGGA	8755	False	NA	NA	False	AATAAA	-26	NA	157988407	157958317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ES.20593.10	chr2	-	3543	13	NNC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_11	54.9304484477113	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGGTCTGCCTTGTCC	8878	False	NA	NA	False	AATAAA	-19	NA	157988284	157958324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980892_157984914_157985095_157988210
ES.20593.11	chr2	-	3555	13	NNC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	2790	-3	intron_retention	FALSE	canonical	0	0	junction_12	54.5753811001098	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGGTCTGCCTTGTCC	NA	False	NA	NA	False	AATAAA	-19	NA	157985496	157958324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157985388
ES.20593.12	chr2	-	5392	12	NIC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	2	-4	intron_retention	FALSE	canonical	3	151	junction_7	15.077759879213	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACAAGGTCTGCCTTGTC	8878	False	NA	NA	False	AATAAA	-18	NA	157988284	157958325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ES.20593.13	chr2	-	4150	12	NIC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	21	-5	intron_retention	FALSE	canonical	3	151	junction_7	19.8356886811259	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACAAGGTCTGCCTTGT	8827	False	NA	NA	False	AATAAA	-17	NA	157988335	157958326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ES.20593.14	chr2	-	1868	9	ISM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	70	10250	0	693	5prime_fragment	FALSE	canonical	3	151	junction_4	21.3248681121361	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGGAGAATCATGTGT	8876	False	NA	NA	False	NA	NA	NA	157988286	157968571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ES.20593.7	chr2	-	5993	11	NIC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	9	-3	intron_retention	FALSE	canonical	3	151	junction_6	15.7445228571716	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGGTCTGCCTTGTCC	8858	False	NA	NA	False	AATAAA	-19	NA	157988304	157958324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ES.20593.8	chr2	-	3483	13	NNC	ENSMUSG00000037820.16	novel	3596	13	NA	NA	244	-3	intron_retention	FALSE	canonical	0	0	junction_12	54.5753811001098	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGGTCTGCCTTGTCC	9120	False	NA	NA	False	AATAAA	-19	NA	157988042	157958324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988006
ES.20594.1	chr2	-	212	1	Intergenic	novelGene_17047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTCTTGTCTGAAAC	NA	False	NA	NA	False	TTTAAA	-13	NA	158008332	158008120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_158008100_158008300
ES.20595.1	chr2	-	3435	9	NNC	ENSMUSG00000037813.14	novel	3910	14	NA	NA	17309	6	intron_retention	FALSE	canonical	2	3	junction_5	2.39791576165636	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTTTTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	158053833	158037664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158046729_158047620_158047720_158050332_158050450_158052058_158052143_158053539_158053634_158053773
ES.20595.2	chr2	-	1987	10	NNC	ENSMUSG00000037813.14	novel	3910	14	NA	NA	17290	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	2.92287698621465	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTTTTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	158053852	158037664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050351_158050450_158052058_158052143_158053539_158053634_158053773
ES.20595.3	chr2	-	1991	10	NNC	ENSMUSG00000037813.14	novel	3910	14	NA	NA	17305	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	2.51415744421884	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTTTTGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	158053837	158037664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050450_158052058_158052143_158053539_158053634_158053773
ES.20596.1	chr2	-	163	1	Intergenic	novelGene_17048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGCGTCACACCCA	9381	False	NA	NA	False	NA	NA	NA	158109592	158109429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_158109400_158109600
ES.20597.1	chr2	-	1620	2	Intergenic	novelGene_17049	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGATGTGTAAGTCTGTA	3184	False	NA	NA	False	NA	NA	NA	158135692	158127630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_158128190_158134631
ES.20598.1	chr2	+	205	1	Intergenic	novelGene_17050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	158135737	158135942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_158135700_158135900
ES.20599.1	chr2	+	1871	15	FSM	ENSMUSG00000016024.10	ENSMUST00000016168.9	2525	15	113	541	-6	-541	multi-exon	FALSE	canonical	1	2	junction_3	1.75691055374984	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATCCCAGCTGAAC	NA	False	NA	NA	False	NA	NA	NA	158148525	158174231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158148714_158150600_158150716_158151520_158151650_158155392_158155549_158156072_158156137_158159456_158159521_158161591_158161684_158162183_158162361_158163974_158164035_158166428_158166597_158167626_158167695_158168147_158168191_158169436_158169501_158170265_158170343_158173825
ES.206.1	chr1	+	204	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28488031	28488235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_28488000_28488200
ES.2060.1	chr1	-	1007	1	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCACCAACAAAACCAGAC	4632	False	NA	NA	False	NA	NA	NA	180729803	180728796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180728800_180729800
ES.20600.1	chr2	+	175	1	Antisense	novelGene_ENSMUSG00000085385.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACTGCAAAA	NA	False	NA	NA	False	NA	NA	NA	158196367	158196542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_158196400_158196500
ES.20601.1	chr2	-	3160	7	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	36.7230626899954	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	8364	False	NA	2	True	NA	NA	NA	158203425	158195619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158199184_158200124_158200261_158201101_158201353_158202383_158202520_158202862_158202991_158203324
ES.20601.10	chr2	-	909	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTTTTAAATCTGT	8336	False	NA	-12	True	AATAAA	-17	NA	158203453	158197699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
ES.20601.13	chr2	-	2020	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	-28	15	-8	5	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCCTTTTAAATCTGT	8319	False	NA	-12	True	AATAAA	-17	NA	158203470	158197699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
ES.20601.14	chr2	-	978	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGCCTTTTAAATCT	8328	False	NA	-14	True	AATAAA	-15	NA	158203461	158197701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
ES.20601.15	chr2	-	1840	6	NNC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	42.038077976996	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8350	False	NA	-17	True	AATAAA	-12	NA	158203439	158197704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_158197962_158199117_158199184_158200124_158201252_158202383_158202520_158202862_158202991_158203313
ES.20601.16	chr2	-	789	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	35.0542436803306	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8350	False	NA	-17	True	AATAAA	-12	NA	158203439	158197704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158199184_158201101_158201252_158202446_158202520_158202862_158202991_158203324
ES.20601.17	chr2	-	1912	6	NNC	ENSMUSG00000085385.8	novel	933	6	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_2	34.3627705518632	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8339	False	NA	-17	True	AATAAA	-12	NA	158203450	158197704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_158197962_158199117_158199184_158200153_158201353_158202383_158202520_158202862_158202991_158203324
ES.20601.18	chr2	-	2873	5	NIC	ENSMUSG00000085385.8	novel	3896	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	34	junction_2	23.7644692766323	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8348	False	NA	-17	True	AATAAA	-12	NA	158203441	158197704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158201353_158202383_158202520_158202862_158202991_158203324
ES.20601.19	chr2	-	5391	2	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	82	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCAGTCTGCCTTTTAA	8350	False	NA	-18	True	AATAAA	-11	NA	158203439	158197705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158202520_158202862
ES.20601.2	chr2	-	4072	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	0	-2065	0	0	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	8347	False	NA	2	True	NA	NA	NA	158203442	158195619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
ES.20601.3	chr2	-	3036	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8350	False	NA	0	True	NA	NA	NA	158203439	158195621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
ES.20601.4	chr2	-	2957	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	39	-2063	1	-2	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	8328	False	NA	0	True	NA	NA	NA	158203461	158195621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
ES.20601.5	chr2	-	4020	1	FSM	ENSMUSG00000085385.8	ENSMUST00000186993.2	3144	1	-878	2	743	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTCTCGTGAGTTC	NA	False	NA	0	True	NA	NA	NA	158199641	158195621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158195600_158199600
ES.20601.6	chr2	-	4089	5	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	-4	intron_retention	FALSE	canonical	2	8	junction_2	32.9545141065682	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTGGTCTCGTGAGT	8350	False	NA	-2	True	NA	NA	NA	158203439	158195623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
ES.20601.7	chr2	-	6006	4	FSM	ENSMUSG00000085385.8	ENSMUST00000149667.8	3896	4	-29	-2081	0	-4	multi-exon	FALSE	canonical	3	64	junction_3	13.8884444373331	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTGGTCTCGTGAGT	8327	False	NA	-2	True	NA	NA	NA	158203462	158195623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158202520_158202862_158202991_158203324
ES.20601.8	chr2	-	892	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	38	3	0	-3	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTGTCAACCCATGA	8327	False	NA	0	True	AATAAA	-29	NA	158203462	158197687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
ES.20601.9	chr2	-	3942	4	FSM	ENSMUSG00000085385.8	ENSMUST00000149667.8	3896	4	-29	-17	0	-3	multi-exon	FALSE	canonical	3	64	junction_3	13.8884444373331	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTGTCAACCCATGA	8327	False	NA	0	True	AATAAA	-29	NA	158203462	158197687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_158197962_158199117_158202520_158202862_158202991_158203324
ES.20602.1	chr2	+	288	1	Intergenic	novelGene_17051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	158211022	158211310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_158211000_158211300
ES.20603.1	chr2	+	2282	7	NIC	ENSMUSG00000044349.17	novel	1646	7	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7.98783797754784	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGCCTTCGGTCACA	NA	False	NA	17	True	NA	NA	NA	158217563	158228061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858_158222961_158224423_158225084_158227192
ES.20603.2	chr2	+	5843	5	FSM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	21	0	-2	0	multi-exon	FALSE	canonical	3	5	junction_4	1.92028643696715	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGGTCACATGTT	NA	False	NA	21	True	NA	NA	NA	158217578	158228065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158217809_158218000_158218247_158218913_158218993_158222690_158222772_158222858
ES.20603.3	chr2	+	290	1	ISM	ENSMUSG00000044349.17	ENSMUST00000137320.2	3156	2	1420	1638	1373	218	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	158219054	158219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158219100_158219300
ES.20603.4	chr2	+	176	1	ISM	ENSMUSG00000044349.17	ENSMUST00000137320.2	3156	2	1420	1752	1373	104	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAGATGGCTG	NA	False	NA	NA	False	NA	NA	NA	158219054	158219230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158219100_158219200
ES.20603.5	chr2	+	128	1	ISM	ENSMUSG00000044349.17	ENSMUST00000109488.8	5864	5	5812	4568	5688	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	158223369	158223497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158223400_158223500
ES.20604.1	chr2	-	157	1	Antisense	novelGene_ENSMUSG00000044349.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	5049	False	NA	NA	False	NA	NA	NA	158226122	158225965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_158226000_158226100
ES.20605.1	chr2	+	158	1	Intergenic	novelGene_17052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	158234260	158234418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_158234300_158234400
ES.20606.1	chr2	+	5409	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	-66	3040	-66	-1433	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGTCCCTCTGATCGC	NA	False	NA	NA	False	ATTAAA	-30	NA	158251701	158338133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.11	chr2	+	5978	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	0	-760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	31.1575719931595	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGATTGGTTTGAGGTT	NA	False	NA	14	True	ATTAAA	-16	NA	158251795	158338806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272340_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296049_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.12	chr2	+	5916	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-1435	intron_retention	FALSE	canonical	0	0	junction_26	31.2759951333519	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTGTCCCTCTGATC	NA	False	NA	NA	False	ATTAAA	-28	NA	158251796	158338131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158325279_158325422_158334283_158334934_158336544_158336694_158337370
ES.20606.13	chr2	+	6178	31	NNC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	1	-758	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.7596635446025	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	158251796	158338808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158261682_158261884_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.14	chr2	+	8354	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	29	0	1	0	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGTGCTTTTGGTT	NA	False	NA	29	True	ATTAAA	-26	NA	158251796	158341173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.15	chr2	+	5977	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	2365	1	-758	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	158251796	158338808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.16	chr2	+	5432	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	2910	1	-1303	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGCACCTCCCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	158251796	158338263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.17	chr2	+	8337	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	5	1	-5	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTGGTGTGTGCTTT	NA	False	NA	24	True	ATTAAA	-21	NA	158251796	158341168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.18	chr2	+	8182	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	24	160	1	-160	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTCCCTTGCTGCC	NA	False	NA	11	True	AGTAAA	-22	NA	158251796	158341013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.2	chr2	+	5195	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	-17	3205	-17	-1598	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAGGCTCAAGTTGAC	NA	False	NA	NA	False	ATTAAA	-24	NA	158251750	158337968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.20	chr2	+	3850	9	FSM	ENSMUSG00000027652.16	ENSMUST00000143394.8	3842	9	-2	-6	1	6	multi-exon	FALSE	canonical	3	103	junction_6	11.5866302262565	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTAGTTTTTGCACTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	158251796	158281572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179
ES.20606.21	chr2	+	5354	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-1438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	25.9643036763618	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACAAGTTGTCCCTCTG	NA	False	NA	NA	False	ATTAAA	-25	NA	158251796	158338128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308610_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.22	chr2	+	5593	25	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	1511	combination_of_known_splicesites	FALSE	canonical	2	4	junction_24	29.5514793293932	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGATGTGCAAGTCCCA	NA	False	NA	NA	False	AATAAA	-18	NA	158251796	158328130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158326332
ES.20606.23	chr2	+	5078	30	NNC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	-1	-1602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.9035070323596	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTTTTAGGCTCAAGT	NA	False	NA	NA	False	ATTAAA	-20	NA	158251797	158337964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290316_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.24	chr2	+	4247	9	FSM	ENSMUSG00000027652.16	ENSMUST00000143394.8	3842	9	0	-405	0	405	multi-exon	FALSE	canonical	3	103	junction_6	11.5866302262565	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTGTGCTATGAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	158251798	158281971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179
ES.20606.25	chr2	+	4697	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	0	-2153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	25.6098970167411	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGGAGAGTGATTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	158251798	158337413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337265
ES.20606.26	chr2	+	6542	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	31	1810	0	-203	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACCTTGTTTGGATGT	NA	False	NA	NA	False	GATAAA	-27	NA	158251798	158339363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.28	chr2	+	5569	28	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	0	-757	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	25.2952930770104	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGGTTTGAGGTTTCT	NA	False	NA	17	True	ATTAAA	-19	NA	158251798	158338809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.29	chr2	+	5793	29	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-763	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	26.0144190786571	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTGATTGGTTTGAG	NA	False	NA	11	True	ATTAAA	-13	NA	158251799	158338803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.3	chr2	+	5535	31	NNC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	-6	-1436	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	32.7596635446025	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGTTGTCCCTCTGAT	NA	False	NA	NA	False	ATTAAA	-27	NA	158251761	158338130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158261682_158261884_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.30	chr2	+	5005	26	ISM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	32	15958	1	-1404	5prime_fragment	FALSE	canonical	3	76	junction_9	15.5273178623998	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTGTCGTTAAAACATT	NA	False	NA	NA	False	ATTAAA	-24	NA	158251799	158325215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284
ES.20606.31	chr2	+	5342	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-1434	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	25.7017560021361	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGTCCCTCTGATCG	NA	False	NA	NA	False	ATTAAA	-29	NA	158251799	158338132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272304_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.32	chr2	+	5111	30	NNC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	1	-1611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.2098887039561	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTCCAGAACTTTTTA	NA	False	NA	NA	False	ATTAAA	-11	NA	158251799	158337955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272346_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.33	chr2	+	5246	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-1441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	25.7955927251693	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAACAAGTTGTCCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	158251799	158338125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158304047_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.34	chr2	+	5770	29	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-758	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	26.1210877355786	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	158251799	158338808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.35	chr2	+	5194	29	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	1	-1441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.105628253896	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAACAAGTTGTCCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	158251799	158338125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158286486_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.36	chr2	+	5298	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	28	3040	-1	-1433	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGTCCCTCTGATCGC	NA	False	NA	NA	False	ATTAAA	-30	NA	158251800	158338133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.37	chr2	+	8369	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.9035070323596	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTGGTGTGTGCTTT	NA	False	NA	24	True	ATTAAA	-21	NA	158251800	158341168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292072_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.38	chr2	+	5031	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	33	3319	-1	-1712	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCATTGATAGTGTCA	NA	False	NA	NA	False	AGTAAA	-42	NA	158251800	158337854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.4	chr2	+	5189	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	5	-1601	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.9035070323596	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTTAGGCTCAAGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	158251777	158337965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292072_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.40	chr2	+	4253	24	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	5	-1726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.4058177699429	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAACTTGTAAGTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	158251806	158324893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158272340_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284
ES.20606.41	chr2	+	8184	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	8	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.9791373354546	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGTGTGCCTGTGTCCC	NA	False	NA	3	True	AGTAAA	-14	NA	158251809	158341005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278600_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.42	chr2	+	6064	29	NIC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	9	-765	intron_retention	FALSE	canonical	3	25	junction_14	21.6654467212807	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCCAGTGATTGGTTTG	NA	False	NA	9	True	ATTAAA	-11	NA	158251810	158338801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.43	chr2	+	4850	27	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	12	366	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	23.9776769951311	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTTTCTGGATATGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	158251813	158326985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158326332
ES.20606.44	chr2	+	8662	30	NIC	ENSMUSG00000027652.16	novel	8366	30	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	28.1885531789244	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTGGTGTGTGCTTT	NA	False	NA	24	True	ATTAAA	-21	NA	158251814	158341168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252367_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.45	chr2	+	7991	31	NNC	ENSMUSG00000027652.16	novel	6709	31	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.1661497283333	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTGGTGTGTGCTTT	NA	False	NA	24	True	ATTAAA	-21	NA	158251817	158341168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272502_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370_158339056_158339393
ES.20606.46	chr2	+	5940	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	16	-760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	31.2162493129024	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGATTGGTTTGAGGTT	NA	False	NA	14	True	ATTAAA	-16	NA	158251817	158338806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282834_158285163_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334431_158334854_158334934_158336544_158336694_158337370
ES.20606.49	chr2	+	5817	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	21	-763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.9643036763618	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTGATTGGTTTGAG	NA	False	NA	11	True	ATTAAA	-13	NA	158251822	158338803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268280_158272469_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.5	chr2	+	8402	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	25.7017560021361	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGTGCTTTTGGTT	NA	False	NA	29	True	ATTAAA	-26	NA	158251780	158341173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272304_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.51	chr2	+	6158	31	NNC	ENSMUSG00000027652.16	novel	6709	31	NA	NA	28	-757	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	30.2014716344897	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGGTTTGAGGTTTCT	NA	False	NA	17	True	ATTAAA	-19	NA	158251829	158338809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158261682_158261884_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.52	chr2	+	5300	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	28	-1438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.9035070323596	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACAAGTTGTCCCTCTG	NA	False	NA	NA	False	ATTAAA	-25	NA	158251829	158338128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292072_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.54	chr2	+	4059	15	ISM	ENSMUSG00000027652.16	ENSMUST00000141497.2	7131	25	13612	1804	13612	-197	3prime_fragment	FALSE	canonical	3	83	junction_1	18.5479246872549	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTGGATGTTTTTTA	6351	False	NA	NA	False	GATAAA	-33	NA	158292085	158339369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.55	chr2	+	2090	1	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	-12238	12449	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTATTTTAAGATGTC	9842	False	NA	NA	False	NA	NA	NA	158295576	158297666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158295600_158297700
ES.20606.56	chr2	+	4933	6	NIC	ENSMUSG00000027652.16	novel	7131	25	NA	NA	-2985	-757	intron_retention	FALSE	canonical	3	86	junction_2	21.8357505023299	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGGTTTGAGGTTTCT	3387	False	NA	17	True	ATTAAA	-19	NA	158316663	158338809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.57	chr2	+	4396	6	ISM	ENSMUSG00000027652.16	ENSMUST00000141497.2	7131	25	41085	6	-90	-6	3prime_fragment	FALSE	canonical	3	86	junction_2	21.8357505023299	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAACTTGGTGTGTGCTT	6282	False	NA	23	True	ATTAAA	-20	NA	158319558	158341167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.58	chr2	+	177	1	Intergenic	novelGene_17054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTATAAAAAAACTGAAAAAA	4602	False	NA	NA	False	NA	NA	NA	158332966	158333143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_158333000_158333100
ES.20606.59	chr2	+	3593	3	NNC	ENSMUSG00000027652.16	novel	7131	25	NA	NA	17020	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGAAGGTGTGCCTGT	8304	False	NA	-2	True	AGTAAA	-9	NA	158336668	158341000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158336694_158337370_158340249_158340310
ES.20606.6	chr2	+	6687	26	NIC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	-9	-3584	intron_retention	FALSE	canonical	3	76	junction_9	15.6120978731239	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTGTACTCTCTGA	NA	False	NA	NA	False	NA	NA	NA	158251786	158335982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283
ES.20606.60	chr2	+	1831	2	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	17216	-766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCCAGTGATTGGTTT	8500	False	NA	8	True	ATTAAA	-10	NA	158336864	158338800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158337266_158337370
ES.20606.61	chr2	+	3087	1	Genic_Genomic	ENSMUSG00000027652.16	novel	NA	NA	NA	NA	19292	854	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTTCTCTGCTTATTC	NA	False	NA	NA	False	CATAAA	-17	NA	158338940	158342027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_158338900_158342000
ES.20606.7	chr2	+	6026	30	NNC	ENSMUSG00000027652.16	novel	8383	30	NA	NA	-9	-755	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.9035070323596	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTTTGAGGTTTCTTT	NA	False	NA	19	True	ATTAAA	-21	NA	158251786	158338811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292072_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.8	chr2	+	6001	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	19	2363	-9	-756	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTTTGAGGTTTCTT	NA	False	NA	18	True	ATTAAA	-20	NA	158251786	158338810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ES.20606.9	chr2	+	4679	26	ISM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	22	16277	-1	-1723	5prime_fragment	FALSE	canonical	3	25	junction_15	21.2808270515974	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACTTGTAAGTTTAAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	158251794	158324896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284
ES.20607.1	chr2	-	5685	1	Antisense	novelGene_ENSMUSG00000027652.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGCGAGAGGGGAGGGT	1197	False	NA	NA	False	NA	NA	NA	158257757	158252072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_158252100_158257800
ES.20608.1	chr2	-	5266	1	Antisense	novelGene_ENSMUSG00000027652.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	158263916	158258650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_158258600_158263900
ES.20609.1	chr2	-	179	1	Intergenic	novelGene_17053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATTTTTCTTCTAGT	6685	False	NA	NA	False	NA	NA	NA	158313652	158313473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_158313500_158313700
ES.2061.1	chr1	-	181	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	180742393	180742212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180742200_180742400
ES.20610.1	chr2	-	1291	1	Intergenic	novelGene_17055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGGTGTCATTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	158403896	158402605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_158402600_158403900
ES.20611.10	chr2	+	9036	6	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	21	-5	intron_retention	FALSE	canonical	3	9	junction_3	38.0284104322019	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466828	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158467437_158468246_158468477_158469976_158477347_158477946_158478068_158478587_158478721_158480552
ES.20611.11	chr2	+	3425	8	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	23	236	intron_retention	FALSE	canonical	0	0	junction_3	38.3011695883655	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGTGTTCGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	158466830	158481367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.12	chr2	+	2876	8	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	25	-5	intron_retention	FALSE	canonical	0	0	junction_4	52.4295445608403	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466832	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468243_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478721_158480552
ES.20611.13	chr2	+	2775	8	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	28	-5	intron_retention	FALSE	canonical	0	0	junction_1	52.936234263113	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466835	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468341_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478721_158480552
ES.20611.14	chr2	+	3460	7	NIC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	29	-1	intron_retention	FALSE	canonical	0	0	junction_4	40.4244837801163	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGGAGTGTTTATTCT	NA	False	NA	NA	False	TTTAAA	-12	NA	158466836	158481117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478721_158480552
ES.20611.15	chr2	+	6316	6	NNC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	29	-5	intron_retention	FALSE	canonical	0	0	junction_4	49.9255445638803	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466836	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468243_158468477_158469976_158470147_158473390_158473601_158474191_158478721_158480552
ES.20611.16	chr2	+	5597	8	NNC	ENSMUSG00000037761.17	novel	2661	11	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_3	46.9298216837152	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGTGTTTATTCTG	NA	False	NA	NA	False	TTTAAA	-13	NA	158466838	158481118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468243_158468477_158469976_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.17	chr2	+	7117	5	NIC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	32	-3	intron_retention	FALSE	canonical	0	0	junction_3	48.1248376620639	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCATGGAGTGTTTATT	NA	False	NA	NA	False	TTTAAA	-10	NA	158466839	158481115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158468477_158469976_158470147_158473382_158473601_158474191_158478721_158480552
ES.20611.2	chr2	+	2420	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	2	-20	2	20	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACTGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	158466809	158481151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.20	chr2	+	4124	8	NNC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	35	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	54.079306842557	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466842	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468233_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478068_158478587_158479089_158479752
ES.20611.22	chr2	+	5209	8	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	35	-5	intron_retention	FALSE	canonical	0	0	junction_4	50.3441219234669	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466842	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468243_158468477_158469976_158470147_158473390_158473601_158474191_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.3	chr2	+	3889	8	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	2	-2	intron_retention	TRUE	canonical	3	87	junction_1	10.3075165757414	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATGGAGTGTTTATTC	NA	False	NA	NA	False	TTTAAA	-11	NA	158466809	158481116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468246_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.4	chr2	+	2633	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	6	-237	6	237	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGTGTTCGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	158466813	158481368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ES.20611.5	chr2	+	3160	9	NIC	ENSMUSG00000037761.17	novel	2661	11	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_4	51.6912407957093	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGGAGTGTTTATTCT	NA	False	NA	NA	False	TTTAAA	-12	NA	158466817	158481117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158476466_158476668_158477226_158478068_158478587_158478721_158480552
ES.20611.6	chr2	+	2365	9	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.7960656754586	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTCTGTGTGTGCC	NA	False	NA	NA	False	TTTAAA	-21	NA	158466820	158481126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478068_158478587_158478721_158480552
ES.20611.7	chr2	+	3760	7	NIC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_3	41.3077878048841	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGTGTTTATTCTG	NA	False	NA	NA	False	TTTAAA	-13	NA	158466827	158481118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478068_158478587_158478721_158480552
ES.20611.8	chr2	+	2957	8	NNC	ENSMUSG00000037761.17	novel	2970	8	NA	NA	20	4	intron_retention	FALSE	canonical	0	0	junction_4	49.1000644249131	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTTTATTCTGTGTG	NA	False	NA	NA	False	TTTAAA	-17	NA	158466827	158481122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158467437_158468243_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478068_158478587_158478721_158480552
ES.20612.1	chr2	+	6192	12	NNC	ENSMUSG00000037754.14	novel	6408	11	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2.72424073886758	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCTGGTCTGACTGT	6314	False	NA	2	True	ATTAAA	-13	NA	158509028	158608251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158509170_158537781_158538131_158582655_158582727_158588437_158588584_158591086_158591191_158592993_158593119_158597063_158597190_158597732_158597809_158598839_158598970_158599057_158599227_158603273_158606727_158606949
ES.20612.2	chr2	+	4781	11	FSM	ENSMUSG00000037754.14	ENSMUST00000045503.11	6408	11	22	1605	22	-1605	multi-exon	FALSE	canonical	1	1	junction_3	2.56124969497314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGCTTGTTTTTTGC	6346	False	NA	NA	False	AATACA	-19	NA	158509060	158606649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158509170_158537781_158538131_158582655_158582727_158588437_158588584_158591086_158591191_158592993_158593119_158597063_158597190_158597732_158597809_158598839_158598970_158599057_158599227_158603273
ES.20612.3	chr2	+	6128	12	NNC	ENSMUSG00000037754.14	novel	6408	11	NA	NA	48	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	2.72424073886758	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACACCTGCTGGTCTGA	6372	False	NA	-2	True	ATTAAA	-9	NA	158509086	158608247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158509170_158537781_158538131_158582655_158582727_158588437_158588584_158591086_158591191_158592993_158593119_158597063_158597190_158597732_158597809_158598839_158598970_158599057_158599227_158603273_158606733_158606957
ES.20613.1	chr2	-	180	1	Antisense	novelGene_ENSMUSG00000037754.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3711	False	NA	NA	False	NA	NA	NA	158606950	158606770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_158606800_158607000
ES.20614.1	chr2	+	2344	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-77	-1	-77	1	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGATTCTTTTTGTTT	329	False	NA	9	True	AATAAA	-17	NA	158609935	158628558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ES.20614.10	chr2	+	4336	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_2	139.458476496291	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	407	False	NA	7	True	AATAAA	-15	NA	158610013	158628556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158621764_158624005_158625052_158625178_158627079
ES.20614.11	chr2	+	4890	2	FSM	ENSMUSG00000027654.3	ENSMUST00000151801.2	3328	2	-1565	3	-1565	-3	multi-exon	FALSE	canonical	3	282	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTGTGATTCTTTTT	7378	False	NA	5	True	AATAAA	-13	NA	158621762	158628554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158625178_158627079
ES.20614.2	chr2	+	5403	3	NIC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	282	junction_2	19	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGATTCTTTTTG	387	False	NA	6	True	AATAAA	-14	NA	158609993	158628555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158610508_158621764_158625178_158627079
ES.20614.3	chr2	+	9422	2	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	-2130	-4	2130	intron_retention	FALSE	canonical	3	320	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAGAAAAAAAAAAAA	402	False	NA	NA	False	NA	NA	NA	158610008	158630687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158610508_158621764
ES.20614.4	chr2	+	2042	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	-4	228	-4	-228	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTCTCTGTCTTA	402	False	NA	NA	False	GATAAA	-15	NA	158610008	158628329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ES.20614.5	chr2	+	2479	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	130.561181911862	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGATTCTTTTTGT	406	False	NA	7	True	AATAAA	-15	NA	158610012	158628556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158621764_158622147_158625052_158625178_158627079
ES.20614.6	chr2	+	2422	5	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	158.025314427784	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158621764_158621933_158625052_158625178_158626471_158626628_158627079
ES.20614.7	chr2	+	4435	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	142.738299773474	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGATTCTTTTTG	407	False	NA	6	True	AATAAA	-14	NA	158610013	158628555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158621764_158624105_158625052_158625178_158627079
ES.20614.8	chr2	+	2159	5	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	132.682892642571	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTGTGTGATTCTTTT	407	False	NA	4	True	AATAAA	-12	NA	158610013	158628553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079_158627120_158627221
ES.20614.9	chr2	+	2615	5	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.153618711875	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGATTCTTTTTG	407	False	NA	6	True	AATAAA	-14	NA	158610013	158628555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158610508_158618102_158618455_158621764_158621933_158625052_158625178_158627079
ES.20615.1	chr2	+	3701	23	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	-5406	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	34.4929325615294	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	6373	False	NA	27	True	AGTAAA	-18	NA	158631320	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158631625_158636259_158636476_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.10	chr2	+	4672	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	2	-1425	-1	1425	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAACAAAACCAGGGTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	158636783	158701559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.11	chr2	+	3319	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.9678080463116	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTCTGTGGATCTTG	NA	False	NA	34	True	AGTAAA	-25	NA	158636783	158700140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659292_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698808_158698905_158698999
ES.20615.12	chr2	+	3243	22	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_19	22.6398400673822	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTTTCTCCTGTCTG	NA	False	NA	25	True	AGTAAA	-16	NA	158636783	158700131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691382_158691474_158693630_158693743_158698999
ES.20615.14	chr2	+	3317	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.8343375388704	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTTTCTCCTGTCTG	NA	False	NA	25	True	AGTAAA	-16	NA	158636784	158700131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691403_158691474_158693630_158693743_158694606_158694703_158698999
ES.20615.15	chr2	+	3235	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	29.412287306976	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGACATGTTTCTCCT	NA	False	NA	20	True	AGTAAA	-11	NA	158636793	158700126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698808_158698835_158698999
ES.20615.16	chr2	+	893	7	FSM	ENSMUSG00000027655.15	ENSMUST00000148359.8	654	7	-10	-229	-4	229	multi-exon	FALSE	canonical	3	86	junction_6	4.02768199119819	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGAGAGTAAGTGTAAG	NA	False	NA	NA	False	TTTAAA	-13	NA	158636800	158660554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181
ES.20615.17	chr2	+	4714	21	NIC	ENSMUSG00000027655.15	novel	3249	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	5	junction_4	22.5815743472416	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158636800	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.18	chr2	+	7394	20	NIC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	77	junction_7	10.0607572560467	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158636800	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.19	chr2	+	3264	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.0641531692666	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158636800	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158663429_158663485_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.2	chr2	+	3671	23	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	-5404	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.7439274675125	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGACATGTTTCTCCTG	6375	False	NA	21	True	AGTAAA	-12	NA	158631322	158700127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158631625_158636259_158636476_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676791_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.20	chr2	+	3221	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	20	8	-3	-8	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGACATGTTTCTCCT	NA	False	NA	20	True	AGTAAA	-11	NA	158636801	158700126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.22	chr2	+	3402	22	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.029239487143	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158636862	158700134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158637088_158643294_158643429_158648322_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.23	chr2	+	3575	23	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.0930032229289	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158636862	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158637088_158642436_158642626_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.24	chr2	+	3145	20	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-11969	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	40.4296180617688	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158657368	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688495_158688708_158688827_158688910_158691401_158691474_158693630_158693743_158694606_158694703_158698999
ES.20615.25	chr2	+	2903	15	ISM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	25248	-7	-7308	7	3prime_fragment	FALSE	canonical	3	62	junction_2	13.5656002522587	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTGTGGATCTTGC	NA	False	NA	35	True	AGTAAA	-26	NA	158662029	158700141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.26	chr2	+	4704	11	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	4290	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.5475831086947	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	5530	False	NA	28	True	AGTAAA	-19	NA	158673627	158700134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158676352_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.27	chr2	+	5407	9	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	6198	-3	intron_retention	FALSE	canonical	3	3	junction_7	33.3054049667618	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTTTCTCCTGTCTG	7438	False	NA	25	True	AGTAAA	-16	NA	158675535	158700131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691382_158693743_158698999
ES.20615.28	chr2	+	4163	8	NIC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	9066	-6	intron_retention	FALSE	canonical	3	91	junction_2	9.20292766194652	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGACATGTTTCTCCTGT	NA	False	NA	22	True	AGTAAA	-13	NA	158678403	158700128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158693743_158698999
ES.20615.29	chr2	+	4042	3	NIC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-4206	-1	intron_retention	FALSE	canonical	3	110	junction_2	3.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158688342	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158688910_158691401_158693743_158698999
ES.20615.3	chr2	+	3309	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	-5	-20	-5	20	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCGTTCTGTATTTTA	NA	False	NA	48	True	AGTAAA	-39	NA	158636721	158700154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.30	chr2	+	4696	2	ISM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	54790	-1390	-977	1390	3prime_fragment	FALSE	canonical	3	110	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTCAGCCAGCCAATTA	NA	False	NA	NA	False	AATAAA	-12	NA	158691571	158701524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_158693743_158698999
ES.20615.31	chr2	+	5815	3	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	-957	4394	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	52	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCATTTGGTTGGGTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	158691591	158704528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158691766_158693630_158693743_158698999
ES.20615.32	chr2	+	3366	3	NNC	ENSMUSG00000027655.15	novel	514	3	NA	NA	-942	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158691606	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158693743_158694606_158694703_158698999
ES.20615.33	chr2	+	2436	3	NNC	ENSMUSG00000027655.15	novel	514	3	NA	NA	-12	-1	intron_retention	FALSE	canonical	2	2	junction_1	0.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTCTCCTGTCTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	158692536	158700133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158693743_158698808_158698905_158698999
ES.20615.4	chr2	+	5951	21	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	3	junction_18	22.639787984873	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGACATGTTTCTCCTGT	NA	False	NA	22	True	AGTAAA	-13	NA	158636772	158700128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158688910_158691382_158691474_158693630_158693743_158698999
ES.20615.5	chr2	+	3369	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.9272741557625	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	NA	False	NA	26	True	AGTAAA	-17	NA	158636774	158700132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158668421_158668557_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.6	chr2	+	5387	21	NIC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	62	junction_9	12.6169528809455	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	NA	False	NA	26	True	AGTAAA	-17	NA	158636778	158700132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158693743_158698999
ES.20615.7	chr2	+	4673	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	53	-1442	-2	1442	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTGGGGCCTGGAA	NA	False	NA	NA	False	ATTAAA	-31	NA	158636779	158701576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.8	chr2	+	3382	23	NNC	ENSMUSG00000027655.15	novel	3284	22	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.6042771088992	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTTCTCCTGTCTGT	NA	False	NA	26	True	AGTAAA	-17	NA	158636779	158700132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676198_158676352_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20615.9	chr2	+	3095	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	56	133	1	-133	multi-exon	FALSE	canonical	3	62	junction_9	12.5862106454921	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTGTACTGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	158636782	158700001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ES.20616.1	chr2	-	174	1	Intergenic	novelGene_17056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTGATGTTATT	NA	False	NA	NA	False	NA	NA	NA	159348576	159348402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_159348400_159348600
ES.20617.1	chr2	-	177	1	Intergenic	novelGene_17057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	159937256	159937079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_159937100_159937300
ES.20618.1	chr2	+	255	1	Intergenic	novelGene_17058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCACACTTGTGTGTC	NA	False	NA	NA	False	AAAACA	-4	NA	160306658	160306913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160306700_160306900
ES.20618.2	chr2	+	174	2	Intergenic	novelGene_17059	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	160306658	160457674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160306679_160457520
ES.20618.3	chr2	+	532	2	FSM	ENSMUSG00000078955.4	ENSMUST00000128681.2	575	2	43	0	43	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGGCTGTTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	160425319	160427111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160425531_160426790
ES.20618.4	chr2	+	2623	2	NNC	ENSMUSG00000078955.4	novel	575	2	NA	NA	43	1581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGTTGTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	160425319	160428692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160426041_160426790
ES.20619.1	chr2	+	285	1	Intergenic	novelGene_17062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTGACCTTACTCT	NA	False	NA	NA	False	NA	NA	NA	160471129	160471414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160471100_160471400
ES.2062.1	chr1	-	244	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAACTCAGGATTCA	NA	False	NA	NA	False	NA	NA	NA	180753319	180753075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180753100_180753300
ES.20620.1	chr2	+	3878	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	-21	-1	-21	1	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGTCTGCCTGTTTGTG	NA	False	NA	24	True	AATAAA	-22	NA	160487786	160564685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.10	chr2	+	6902	20	NIC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	1	-5	intron_retention	FALSE	canonical	3	359	junction_6	41.2984542915326	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTTAGCGTCTGCCTG	NA	False	NA	18	True	AATAAA	-16	NA	160487900	160564679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.11	chr2	+	3460	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	94	302	2	-302	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTTGGTCCAAGAAAAA	NA	False	NA	-62	True	AATAAA	-15	NA	160487901	160564382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.13	chr2	+	5381	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	94	-1619	2	1619	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAGTTCATCCATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	160487901	160566303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.14	chr2	+	3815	21	NNC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	101.102967315505	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTAGCGTCTGCCTGTT	NA	False	NA	20	True	AATAAA	-18	NA	160487921	160564681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535799_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.15	chr2	+	3451	18	NIC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	33	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	109.536330103107	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTAGCGTCTGCCTGT	NA	False	NA	19	True	AATAAA	-17	NA	160487932	160564680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160488183_160488527_160488553_160512019_160512123_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.17	chr2	+	690	6	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	145	34965	53	2848	5prime_fragment	FALSE	canonical	3	362	junction_4	37.8386046254351	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTTTGTTGCTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	160487952	160529719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567
ES.20620.19	chr2	+	4119	8	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	153	25652	61	3396	5prime_fragment	FALSE	canonical	3	359	junction_7	38.2152870362805	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTTATAGTTCTATA	NA	False	NA	NA	False	AATAAA	-20	NA	160487960	160539032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615
ES.20620.20	chr2	+	3888	22	NNC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	130.098828647377	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487961	160564684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544236_160544423_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.22	chr2	+	3038	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	156	662	64	-662	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTTTTGGTTCA	NA	False	NA	4	True	ATTAAA	-18	NA	160487963	160564022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.23	chr2	+	3894	20	NNC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	72	0	intron_retention	FALSE	non_canonical	0	0	junction_8	103.727508992955	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487971	160564684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540047_160540160_160544621_160544744_160545491_160545615_160546702_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.24	chr2	+	172	1	Intergenic	novelGene_17064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAAAGC	NA	False	NA	NA	False	NA	NA	NA	160496406	160496578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160496400_160496600
ES.20620.25	chr2	+	176	1	Intergenic	novelGene_17066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160509056	160509232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160509100_160509200
ES.20620.26	chr2	+	4665	19	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	22995	8	-1250	-8	3prime_fragment	FALSE	canonical	3	359	junction_5	40.8523765118587	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGAAACTTAGCGTCTGC	NA	False	NA	15	True	AATAAA	-13	NA	160510802	160564676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.27	chr2	+	3351	18	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	36762	3	-3019	-3	3prime_fragment	FALSE	canonical	3	359	junction_4	41.5522350216462	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTAGCGTCTGCCTGTT	NA	False	NA	20	True	AATAAA	-18	NA	160524569	160564681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.29	chr2	+	5043	13	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	50087	0	-6168	0	3prime_fragment	FALSE	canonical	3	372	junction_12	39.0266112913854	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160537894	160564684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.3	chr2	+	3696	19	NIC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	104.119530075821	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487787	160564684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160488183_160488527_160488553_160512019_160512123_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.30	chr2	+	4520	8	ISM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	64437	0	-7144	0	3prime_fragment	FALSE	canonical	3	372	junction_7	47.8146933270431	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160552244	160564684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.4	chr2	+	3693	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	0	163	0	-163	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTTTTTGCTATAAT	NA	False	NA	77	True	CATAAA	-21	NA	160487807	160564521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.6	chr2	+	3760	20	NNC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.585819758446	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTAGCGTCTGCCTGT	NA	False	NA	19	True	AATAAA	-17	NA	160487891	160564680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160488183_160512002_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20620.9	chr2	+	3762	20	NNC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.585819758446	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTAGCGTCTGCCTGT	NA	False	NA	19	True	AATAAA	-17	NA	160487897	160564680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160488183_160511994_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ES.20621.1	chr2	-	816	4	Intergenic	novelGene_17060	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGATATCCATTTTCTC	5379	False	NA	NA	False	AATAAA	-25	NA	160362566	160328135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160328578_160357541_160357705_160361636_160361727_160362445
ES.20622.1	chr2	-	996	2	NNC	ENSMUSG00000078956.4	novel	340	3	NA	NA	-36301	768	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATTTTTGAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	160498192	160409530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160410363_160498028
ES.20622.2	chr2	-	1059	3	NNC	ENSMUSG00000078956.4	novel	340	3	NA	NA	-36259	758	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTACAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	160498150	160409540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160410363_160461781_160461918_160498049
ES.20622.3	chr2	-	168	1	Intergenic	novelGene_17061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAATCATG	NA	False	NA	NA	False	NA	NA	NA	160424859	160424691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160424700_160424900
ES.20622.4	chr2	-	2258	1	Genic_Genomic	ENSMUSG00000078956.4	novel	NA	NA	NA	NA	13355	1637	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGTGTTCTGCCTGCA	NA	False	NA	NA	False	AATAAA	-24	NA	160448536	160446278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_160446300_160448500
ES.20622.5	chr2	-	1034	4	NNC	ENSMUSG00000078956.4	novel	1437	2	NA	NA	-36260	1628	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.4142135623731	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGCACATTGGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	160498151	160446287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160446666_160448824_160449243_160461781_160461918_160498049
ES.20622.6	chr2	-	4372	1	Antisense	novelGene_ENSMUSG00000070544.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTCCTTCTTTGGTGA	NA	False	NA	NA	False	AATAAA	-38	NA	160493385	160489013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_160489000_160493400
ES.20622.7	chr2	-	4561	1	Intergenic	novelGene_17063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGACATATGTAACAGTT	NA	False	NA	NA	False	AATAAA	-26	NA	160498151	160493590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160493600_160498200
ES.20622.8	chr2	-	338	2	Antisense	novelGene_ENSMUSG00000070544.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTTGCAACTTAAAAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	160498173	160494705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_160494899_160498028
ES.20623.1	chr2	-	1569	1	Intergenic	novelGene_17065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTTTACCAACAGTG	NA	False	NA	NA	False	NA	NA	NA	160508712	160507143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160507100_160508700
ES.20624.1	chr2	-	184	1	Intergenic	novelGene_17067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	160516767	160516583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160516600_160516800
ES.20625.1	chr2	-	179	1	Intergenic	novelGene_17068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160541340	160541161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160541200_160541300
ES.20626.1	chr2	-	4609	1	Antisense	novelGene_ENSMUSG00000070544.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160566607	160561998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_160562000_160566600
ES.20627.1	chr2	+	5246	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-69	10	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573150	160605216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.10	chr2	+	5162	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-24	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	43.9845387430345	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTGTTTCTTGGGG	NA	False	NA	24	True	AATAAA	-25	NA	160573195	160605214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595895_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.11	chr2	+	5090	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.3645275056706	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAACTTGTTTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	160573195	160605208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589935_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596325_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.12	chr2	+	7095	29	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-19	8	intron_retention	FALSE	canonical	3	165	junction_14	25.1203226938847	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTGTTTCTTGGGG	NA	False	NA	24	True	AATAAA	-25	NA	160573200	160605214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598887_160599133_160599204_160599891_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.13	chr2	+	5461	32	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-19	2	intron_retention	FALSE	canonical	3	165	junction_14	24.2454497055756	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAACTTGTTTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	160573200	160605208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.15	chr2	+	5159	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	44.2192579476126	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTAACTTGTTTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	160573201	160605207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593730_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.16	chr2	+	5205	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.1765699883717	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAACTTGTTTGTTTC	NA	False	NA	18	True	AATAAA	-19	NA	160573201	160605208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589935_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.18	chr2	+	4444	32	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	-119	intron_retention	FALSE	canonical	3	165	junction_13	24.2377231117966	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGAGGTGGGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	160573201	160604303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.19	chr2	+	5617	31	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	10	intron_retention	FALSE	canonical	0	0	junction_15	45.6679926814783	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573201	160605216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160595274_160595361_160595485_160595562_160595665_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.2	chr2	+	5484	31	ISM	ENSMUSG00000016933.18	ENSMUST00000103115.8	4435	34	-60	12467	-50	7	intron_retention	FALSE	canonical	3	165	junction_14	21.8658790508561	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTTTGTTTCTTGGG	NA	False	NA	23	True	AATAAA	-24	NA	160573169	160605213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.20	chr2	+	5137	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	43.9779330318058	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTGTTTCTTGGGG	NA	False	NA	24	True	AATAAA	-25	NA	160573201	160605214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601657_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.21	chr2	+	5243	32	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	1	intron_retention	FALSE	canonical	0	0	junction_7	44.5164329115388	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTAACTTGTTTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	160573201	160605207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593128_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.22	chr2	+	4284	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-18	-117	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGGTGGGTCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	160573201	160604305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.23	chr2	+	5427	32	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-16	-2	intron_retention	FALSE	canonical	0	0	junction_22	44.5304792204685	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTAACTTGTTTG	NA	False	NA	14	True	AATAAA	-15	NA	160573203	160605204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160598964_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.24	chr2	+	5268	32	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-15	10	intron_retention	FALSE	canonical	3	165	junction_14	23.7016664105028	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573204	160605216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.25	chr2	+	5259	32	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	165	junction_13	24.0281659213562	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAACTTGTTTGT	NA	False	NA	15	True	AATAAA	-16	NA	160573204	160605205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.26	chr2	+	4673	33	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-15	271	combination_of_known_junctions	FALSE	canonical	3	165	junction_14	23.8978947817585	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGGTATTGTAACTAAG	NA	False	NA	NA	False	GATAAA	-28	NA	160573204	160604697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.27	chr2	+	5212	33	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-15	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.7019378860938	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGTTTGTTTCTTGG	NA	False	NA	22	True	AATAAA	-23	NA	160573204	160605212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573613_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.28	chr2	+	5678	31	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-13	0	intron_retention	FALSE	canonical	3	165	junction_14	24.3549903624607	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTAACTTGTTTGTT	NA	False	NA	16	True	AATAAA	-17	NA	160573206	160605206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.29	chr2	+	5782	29	NIC	ENSMUSG00000016933.18	novel	4435	34	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	165	junction_14	21.943195449401	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTCTTTTAACTTGT	NA	False	NA	11	True	AATAAA	-12	NA	160573209	160605201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.3	chr2	+	5469	31	NIC	ENSMUSG00000016933.18	novel	4435	34	NA	NA	-43	10	intron_retention	FALSE	canonical	3	165	junction_14	24.5013378319543	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573176	160605216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
ES.20627.30	chr2	+	5683	30	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	165	junction_13	24.5048467626969	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573212	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.31	chr2	+	5180	33	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	44.269582090161	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTAACTTGTTTGTT	NA	False	NA	16	True	AATAAA	-17	NA	160573212	160605206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593349_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.32	chr2	+	5527	31	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-7	4	intron_retention	FALSE	canonical	3	165	junction_14	24.066020305263	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAACTTGTTTGTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	160573212	160605210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.33	chr2	+	5220	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-6	10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_26	43.540648662342	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTCTTGGGGGC	NA	False	NA	26	True	AATAAA	-27	NA	160573213	160605216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601564_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.34	chr2	+	4942	31	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	44.2760155790418	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573613	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.35	chr2	+	5711	30	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_1	67.7617179251768	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573614	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573954_160588969_160589038_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595453_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.36	chr2	+	5501	29	ISM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	-34	-7	0	7	intron_retention	FALSE	canonical	3	165	junction_13	20.3029353462367	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGTTTGTTTCTTGGG	NA	False	NA	23	True	AATAAA	-24	NA	160573618	160605213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224
ES.20627.37	chr2	+	5222	31	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	6	-3	intron_retention	FALSE	canonical	3	165	junction_13	20.3592457838911	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573624	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603844_160604013
ES.20627.38	chr2	+	4616	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	-18	509	16	271	multi-exon	FALSE	canonical	3	165	junction_13	22.7747418375012	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGGTATTGTAACTAAG	NA	False	NA	NA	False	GATAAA	-28	NA	160573634	160604697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.39	chr2	+	5561	30	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-10	1	intron_retention	FALSE	canonical	3	165	junction_13	23.3436305912244	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTAACTTGTTTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	160573642	160605207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
ES.20627.4	chr2	+	5000	32	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-39	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_17	44.1247404062723	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTCTTTTAACTTGT	NA	False	NA	11	True	AATAAA	-12	NA	160573180	160605201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.40	chr2	+	6274	25	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	0	-4	intron_retention	FALSE	canonical	3	191	junction_2	19.1049277383844	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTTTAACTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	160573652	160605202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.42	chr2	+	6087	30	NNC	ENSMUSG00000016933.18	novel	2876	20	NA	NA	1563	-1	intron_retention	FALSE	canonical	0	0	junction_1	43.6696876233672	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAACTTGTTTGT	NA	False	NA	15	True	AATAAA	-16	NA	160575215	160605205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160576238_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.43	chr2	+	6270	27	NNC	ENSMUSG00000016933.18	novel	2876	20	NA	NA	-2383	-3	intron_retention	FALSE	canonical	0	0	junction_1	62.3672554808452	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160580523	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160580646_160581547_160581646_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160599204_160599891_160600050_160601373_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.44	chr2	+	4847	32	NNC	ENSMUSG00000016933.18	novel	2876	20	NA	NA	-5058	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.8355407243156	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTAACTTGTTTGTT	5950	False	NA	16	True	AATAAA	-17	NA	160589348	160605206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160589390_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.45	chr2	+	3789	29	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-4453	-119	intron_retention	FALSE	canonical	1	2	junction_14	45.3656769249302	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGAGGTGGGTCCTTC	6555	False	NA	NA	False	NA	NA	NA	160589953	160604303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595895_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.46	chr2	+	4627	27	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-1519	8	intron_retention	FALSE	canonical	2	5	junction_21	46.2060602085917	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTGTTTCTTGGGG	9489	False	NA	24	True	AATAAA	-25	NA	160592887	160605214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601564_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.47	chr2	+	4600	26	ISM	ENSMUSG00000016933.18	ENSMUST00000017077.14	4180	32	10155	-783	-1345	3	intron_retention	FALSE	canonical	3	165	junction_8	23.6151138045109	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAACTTGTTTGTTTCT	9663	False	NA	19	True	AATAAA	-20	NA	160593061	160605209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
ES.20627.48	chr2	+	4535	22	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-704	-1	intron_retention	FALSE	canonical	2	5	junction_13	51.3050102975592	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTAACTTGTTTGT	NA	False	NA	15	True	AATAAA	-16	NA	160593702	160605205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599940_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.49	chr2	+	3980	22	NNC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-181	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	52.2735262054332	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTAACTTGTTTG	NA	False	NA	14	True	AATAAA	-15	NA	160594225	160605204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598867_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.51	chr2	+	4469	12	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	-300	-5	intron_retention	FALSE	canonical	3	193	junction_2	19.0618826956003	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTCTTTTAACTTGT	NA	False	NA	11	True	AATAAA	-12	NA	160595686	160605201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479
ES.20627.52	chr2	+	5040	10	NIC	ENSMUSG00000016933.18	novel	5107	32	NA	NA	198	1	intron_retention	FALSE	canonical	3	196	junction_2	25.8604994557098	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTAACTTGTTTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	160597023	160605207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160597739_160598460_160598887_160599133_160599204_160599891_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.6	chr2	+	5182	33	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.4773936927241	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573185	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593392_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603675_160603844_160604013
ES.20627.7	chr2	+	5371	32	ISM	ENSMUSG00000016933.18	ENSMUST00000103115.8	4435	34	-41	12471	-31	3	5prime_fragment	FALSE	canonical	3	165	junction_14	24.1792646006555	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAACTTGTTTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	160573188	160605209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658
ES.20627.8	chr2	+	5855	30	NIC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	165	junction_13	24.7363745989513	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTAACTTGTTTG	NA	False	NA	14	True	AATAAA	-15	NA	160573189	160605204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20627.9	chr2	+	5261	32	NNC	ENSMUSG00000016933.18	novel	4388	33	NA	NA	-28	-3	intron_retention	FALSE	canonical	0	0	junction_16	44.9738969268473	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTAACTTGTTT	NA	False	NA	13	True	AATAAA	-14	NA	160573191	160605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595906_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ES.20628.1	chr2	+	4942	1	Antisense	novelGene_ENSMUSG00000035877.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCAAAAATAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	160606955	160611897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_160607000_160611900
ES.20629.1	chr2	+	174	1	Intergenic	novelGene_17069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGGGAAACTGGG	NA	False	NA	NA	False	NA	NA	NA	160642119	160642293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160642100_160642300
ES.2063.1	chr1	-	2120	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAACCTAGAAGCCCTG	NA	False	NA	NA	False	ATTAAA	-27	NA	180755802	180753682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180753700_180755800
ES.20630.1	chr2	-	2584	1	ISM	ENSMUSG00000035877.18	ENSMUST00000103111.9	9563	3	104203	601	91262	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTGCTGTCTTTGTGG	9669	False	NA	NA	False	AATAAA	-16	NA	160610289	160607705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160607700_160610300
ES.20631.1	chr2	-	5145	4	FSM	ENSMUSG00000035877.18	ENSMUST00000109460.8	4480	4	-55	-610	-47	610	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAAGCCTGAACGTT	NA	False	NA	NA	False	AATAAA	-25	NA	160714965	160611756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160613546_160621320_160624300_160674216_160674339_160714710
ES.20631.2	chr2	-	3684	4	FSM	ENSMUSG00000035877.18	ENSMUST00000109460.8	4480	4	-5	801	3	-801	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGTACAGCTCTGACA	NA	False	NA	NA	False	AATACA	-18	NA	160714915	160613167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160613546_160621320_160624300_160674216_160674339_160714710
ES.20632.1	chr2	+	3693	20	NNC	ENSMUSG00000027412.13	novel	3470	20	NA	NA	-229	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	14.198825592261	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGGTTGAGAACCACG	NA	False	NA	NA	False	NA	NA	NA	160722360	160747916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160722717_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741494_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.10	chr2	+	3304	19	NIC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	12.1467365936923	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTTGAGAACCACGG	NA	False	NA	NA	False	NA	NA	NA	160730095	160747917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.11	chr2	+	3060	20	NNC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	6	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	11.9486435674721	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGCAGGGTTCGCTAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	160730096	160747695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740862_160741503_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.12	chr2	+	3220	19	NIC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	12.2601683673211	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTTGAGAACCACGG	NA	False	NA	NA	False	NA	NA	NA	160730099	160747917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.2	chr2	+	5050	19	NNC	ENSMUSG00000027412.13	novel	520	4	NA	NA	2674	-13	intron_retention	FALSE	canonical	1	1	junction_1	12.0529951198042	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGGTTCGCTAGCTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	160725263	160747699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160725361_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.3	chr2	+	3467	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	0	-9	0	9	multi-exon	FALSE	canonical	3	25	junction_3	8.54837950981163	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGTCCTTGATGTATCA	NA	False	NA	NA	False	NA	NA	NA	160730027	160747931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.4	chr2	+	4546	21	NNC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	-26	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	13.9042259762994	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTGAGAACCACGGTCC	NA	False	NA	NA	False	NA	NA	NA	160730064	160747920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160730138_160733915_160734309_160734744_160735563_160735604_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.5	chr2	+	3211	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	37	210	-26	0	multi-exon	FALSE	canonical	3	25	junction_3	8.54837950981163	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTAGGCCATTGGCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	160730064	160747712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.6	chr2	+	4100	19	NIC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	25	junction_3	8.73848448594555	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGGTTGAGAACCACG	NA	False	NA	NA	False	NA	NA	NA	160730065	160747916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20632.7	chr2	+	3391	21	NNC	ENSMUSG00000027412.13	novel	3458	20	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6231420751602	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCCTAGGCCATTGGCT	NA	False	NA	NA	False	ATTAAA	-29	NA	160730078	160747711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160730138_160733641_160733837_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ES.20633.1	chr2	-	4112	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	-58	-507	-58	506	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTTTTGCTACTGTTG	NA	False	NA	2	True	NA	NA	NA	160754306	160747850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
ES.20633.10	chr2	-	3830	3	NIC	ENSMUSG00000050700.12	novel	3396	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	15	junction_2	1.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTTTTCTTCACTA	NA	False	NA	NA	False	ATTAAA	-15	NA	160754240	160748356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160751751_160752661_160752785_160753927
ES.20633.2	chr2	-	3937	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	-38	-503	-27	503	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTAGTTTTGCTACTG	NA	False	NA	-1	True	NA	NA	NA	160754275	160747853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
ES.20633.5	chr2	-	3913	5	NNC	ENSMUSG00000050700.12	novel	3547	4	NA	NA	6	503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.29725975966321	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTAGTTTTGCTACTG	NA	False	NA	-1	True	NA	NA	NA	160754231	160747853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160750877_160750997_160751237_160751526_160751751_160752661_160752785_160753927
ES.20633.6	chr2	-	3882	3	NNC	ENSMUSG00000050700.12	novel	3396	4	NA	NA	1611	497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTAACTGTAGTTTTG	NA	False	NA	-7	True	NA	NA	NA	160752626	160747859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160751096_160751526_160751751_160752204
ES.20633.7	chr2	-	3600	1	Genic_Genomic	ENSMUSG00000050700.12	novel	NA	NA	NA	NA	2778	497	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTAACTGTAGTTTTG	NA	False	NA	-7	True	NA	NA	NA	160751459	160747859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_160747900_160751500
ES.20633.8	chr2	-	3417	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	-20	-1	-9	1	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTTCTTCACTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	160754257	160748355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
ES.20633.9	chr2	-	3584	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	-36	-1	-36	0	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTTTTCTTCACTA	NA	False	NA	NA	False	ATTAAA	-15	NA	160754284	160748356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
ES.20634.1	chr2	+	182	1	Intergenic	novelGene_17070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAATGCATTA	NA	False	NA	NA	False	NA	NA	NA	160816827	160817009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160816800_160817000
ES.20635.1	chr2	+	3075	1	Intergenic	novelGene_17071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAGTAAAACCCCAACTA	5287	False	NA	NA	False	NA	NA	NA	160886050	160889125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_160886000_160889100
ES.20636.1	chr2	-	5383	8	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-1372	12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	21.2430060519327	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAAATTCAGATTTATA	8583	False	NA	-11	True	AATAAA	-36	NA	160808088	160788885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088
ES.20636.10	chr2	-	5615	8	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-1803	-187	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	21.2430060519327	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCTGTAAGGCATAAG	8152	False	NA	NA	False	AATGAA	-18	NA	160808519	160789084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088
ES.20636.11	chr2	-	6794	9	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	138815	190	-5411	-190	intron_retention	FALSE	canonical	3	24	junction_8	11.651180197731	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCTCTGTAAGGCAT	4544	False	NA	NA	False	AATGAA	-15	NA	160812127	160789087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258
ES.20636.12	chr2	-	10090	37	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	11	-464	combination_of_known_junctions	FALSE	canonical	3	17	junction_34	19.0250606332481	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCAAGCCTTACTGCA	NA	False	NA	NA	False	TATAAA	-10	NA	160950984	160789361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
ES.20636.13	chr2	-	10114	38	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	24	-467	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	20.280682010711	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTGCAAGCCTTACT	NA	False	NA	NA	False	TATAAA	-7	NA	160950971	160789364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.15	chr2	-	10740	36	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-22	-467	intron_retention	FALSE	non_canonical	0	0	junction_9	20.2094340467465	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTGCAAGCCTTACT	NA	False	NA	NA	False	TATAAA	-7	NA	160951017	160789364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811486_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.17	chr2	-	10215	38	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-10	-470	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_35	20.0539812047923	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTATTTTGCAAGCCTT	NA	False	NA	NA	False	TATAAA	-4	NA	160951005	160789367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901619_160901727_160901838_160901895_160950908
ES.20636.18	chr2	-	10084	37	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-2	-472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.955254730472	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTATTTTGCAAGCC	NA	False	NA	NA	False	TATAAA	-2	NA	160950944	160789369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811486_160812036_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.19	chr2	-	2821	2	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	0	-476	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCCTGTATTTTGCA	NA	False	NA	NA	False	AATACA	-9	NA	160950995	160789373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160950908
ES.20636.2	chr2	-	10574	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-51	-8	2	8	multi-exon	TRUE	canonical	3	24	junction_8	18.6792285774042	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTTCAAAATTCAGATT	NA	False	NA	-15	True	AATAAA	-32	NA	160950993	160788889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.20	chr2	-	5660	6	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	145204	478	978	-478	3prime_fragment	FALSE	canonical	3	46	junction_2	5.17687164221791	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACCTCCTGTATTTTG	NA	False	NA	NA	False	AATACA	-7	NA	160805738	160789375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782
ES.20636.22	chr2	-	6414	11	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	5573	-735	intron_retention	FALSE	canonical	3	24	junction_8	12.177438154226	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAGTGTAGAAGGTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	160821393	160789632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160812127_160819378_160819440_160821288
ES.20636.25	chr2	-	5369	6	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	145236	737	1010	-737	3prime_fragment	FALSE	canonical	3	46	junction_2	5.17687164221791	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTAGTGTAGAAGGTC	NA	False	NA	NA	False	AATAAA	-16	NA	160805706	160789634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782
ES.20636.26	chr2	-	7470	23	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	3971	-737	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.2757572017384	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTAGTGTAGAAGGTC	4039	False	NA	NA	False	AATAAA	-16	NA	160856198	160789634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807280_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003
ES.20636.27	chr2	-	9829	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-53	739	0	-739	multi-exon	FALSE	canonical	3	24	junction_8	18.6792285774042	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTTGTAGTGTAGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	160950995	160789636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.28	chr2	-	9733	37	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-2	-739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	20.9925582052307	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTTGTAGTGTAGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	160950944	160789636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821368_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894831_160901834_160901895_160950908
ES.20636.31	chr2	-	7978	26	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	143	-744	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	12.6427845034233	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACCTCCTTGTAGTGTA	211	False	NA	NA	False	AATAAA	-9	NA	160860026	160789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945
ES.20636.32	chr2	-	8430	7	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-3202	-841	intron_retention	FALSE	canonical	3	38	junction_6	7.03957069398096	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGAGTCCCAGTTTTA	6753	False	NA	NA	False	AAAACA	-18	NA	160809918	160789738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160808661_160809707
ES.20636.33	chr2	-	5111	8	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	141187	843	-3039	-843	3prime_fragment	FALSE	canonical	3	30	junction_6	9.4782242373705	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGAGAGTCCCAGTTT	6916	False	NA	NA	False	AAAACA	-16	NA	160809755	160789740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707
ES.20636.34	chr2	-	9492	36	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-11	-911	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.4929853603518	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAGCATCTCAAAGAA	NA	False	NA	NA	False	TATAAA	-14	NA	160950953	160789808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
ES.20636.35	chr2	-	8346	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-21	2190	-21	-2190	multi-exon	FALSE	canonical	3	24	junction_8	18.6792285774042	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGTGACATGTTAA	NA	False	NA	NA	False	NA	NA	NA	160950963	160791087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.36	chr2	-	4144	11	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	-5375	-2251	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	18.4024454896625	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCTTCATAAGAACCTG	4580	False	NA	NA	False	CATAAA	-20	NA	160812091	160791148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088_160808661_160809707_160809917_160811258_160811476_160812065
ES.20636.37	chr2	-	4136	1	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	718	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCTACATTGAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	160805998	160801862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160801900_160806000
ES.20636.38	chr2	-	1955	5	NNC	ENSMUSG00000057133.15	novel	764	4	NA	NA	-1465	-21	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	23.710493457539	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	8490	False	NA	NA	False	NA	NA	NA	160808181	160801883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160802350_160803193_160803401_160803782_160803935_160806677_160806715_160807088
ES.20636.39	chr2	-	3571	3	ISM	ENSMUSG00000057133.15	ENSMUST00000137152.2	764	4	35	-99	35	-22	intron_retention	FALSE	canonical	3	46	junction_1	6.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGTAAAAAAAAAAAAAAAAA	9990	False	NA	NA	False	NA	NA	NA	160806681	160801884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160802350_160803193_160803401_160803782
ES.20636.4	chr2	-	3555	4	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	4052	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.7954243967663	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGTTCAAAATTC	NA	False	NA	-20	True	AATAAA	-27	NA	160799389	160788894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160792108_160798002_160798123_160798955_160799148_160799359
ES.20636.40	chr2	-	5249	30	NNC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	2	-6019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.6857350769209	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATCACCATCTCAGCCA	NA	False	NA	NA	False	NA	NA	NA	160950993	160808002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_160808661_160809707_160809917_160811258_160811471_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
ES.20636.41	chr2	-	3264	18	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-42	44798	11	42	5prime_fragment	FALSE	canonical	3	24	junction_8	23.2329857379024	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGGTAAGGTTAACATT	NA	False	NA	NA	False	AATAAA	-19	NA	160950984	160833695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.42	chr2	-	3979	14	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	24	7247	24	-1189	5prime_fragment	FALSE	canonical	3	24	junction_4	24.0785204680228	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATTGTCTAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	160950971	160857200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.43	chr2	-	1466	10	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	8	17852	8	0	5prime_fragment	FALSE	canonical	3	41	junction_1	19.8997487421324	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACGTGTATTTGAC	NA	False	NA	NA	False	CATAAA	-15	NA	160950987	160867805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.45	chr2	-	1139	7	ISM	ENSMUSG00000057133.15	ENSMUST00000134178.8	3608	23	-51	46656	2	-1	5prime_fragment	FALSE	canonical	3	17	junction_4	26.954694499392	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAAGGGTCTTCTATA	NA	False	NA	NA	False	AATAAA	-16	NA	160950993	160871759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
ES.20636.46	chr2	-	1159	7	ISM	ENSMUSG00000057133.15	ENSMUST00000138078.8	3092	17	-18	21809	-18	-4	5prime_fragment	FALSE	canonical	3	60	junction_4	13.7931142241337	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACTAAAGGGTCTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	160951013	160871762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.47	chr2	-	3137	1	Genic_Genomic	ENSMUSG00000057133.15	novel	NA	NA	NA	NA	-8618	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7953	False	NA	NA	False	NA	NA	NA	160880086	160876949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_160876900_160880100
ES.20636.48	chr2	-	12183	1	NIC	ENSMUSG00000057133.15	novel	3092	17	NA	NA	22	-61840	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGATAGAATAGGAAAAC	NA	False	NA	NA	False	NA	NA	NA	160950973	160938790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160938800_160951000
ES.20636.49	chr2	-	3466	1	Intergenic	novelGene_17072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTGGTCTGTTTGCT	2454	False	NA	NA	False	NA	NA	NA	160948214	160944748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_160944700_160948200
ES.20636.50	chr2	-	4240	1	NIC	ENSMUSG00000057133.15	novel	3092	17	NA	NA	2	-69803	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTATGAATGTGTAC	NA	False	NA	NA	False	NA	NA	NA	160950993	160946753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160946800_160951000
ES.20636.6	chr2	-	6502	6	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	144830	10	604	-10	3prime_fragment	FALSE	canonical	3	46	junction_2	5.17687164221791	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCCTGGATTTAAAAAGG	NA	False	NA	-33	True	AATAAA	-14	NA	160806112	160788907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782
ES.20636.7	chr2	-	10475	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	-64	104	-11	-104	multi-exon	FALSE	canonical	3	24	junction_8	18.6792285774042	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCCTCTTCATCTAAT	NA	False	NA	-127	True	TTTAAA	-15	NA	160951006	160789001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ES.20636.8	chr2	-	3753	3	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	1090	-104	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCCTCTTCATCTAAT	NA	False	NA	-127	True	TTTAAA	-15	NA	160802351	160789001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_160792108_160798955_160799148_160801896
ES.20637.1	chr2	+	1885	3	FSM	ENSMUSG00000109780.2	ENSMUST00000209874.2	1805	3	-79	-1	-79	1	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	160951251	160956779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_160951749_160954023_160954240_160955607
ES.20637.2	chr2	+	2057	3	NNC	ENSMUSG00000109780.2	novel	1805	3	NA	NA	7	-450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCTCTTAAAATTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	160951337	160956328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_160951749_160954023_160954949_160955607
ES.20637.3	chr2	+	877	1	NIC	ENSMUSG00000109780.2	novel	1805	3	NA	NA	8	-4563	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	160951338	160952215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_160951300_160952200
ES.20638.1	chr2	+	177	1	Intergenic	novelGene_17073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGTGAACGAGGTT	NA	False	NA	NA	False	NA	NA	NA	161267779	161267956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_161267800_161268000
ES.20639.1	chr2	+	1704	10	Antisense	novelGene_ENSMUSG00000053141.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTACACATCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	161791517	161819706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_161791642_161792221_161792456_161800290_161800380_161804177_161804424_161810783_161811020_161812738_161812824_161815656_161815772_161817340_161817370_161818751_161818925_161819333
ES.20639.2	chr2	+	764	5	Antisense	novelGene_ENSMUSG00000053141.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.6393596310755	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTATTTTTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	161791537	161811027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_161791632_161791839_161791931_161800290_161800380_161804177_161804424_161810783
ES.20639.3	chr2	+	1226	6	Antisense	novelGene_ENSMUSG00000053141.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.83303027798234	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATAACTCTTCTATTG	NA	False	NA	NA	False	AATATA	-7	NA	161791539	161813215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_161791632_161792369_161792456_161800290_161800380_161804177_161804424_161810783_161811020_161812738
ES.20639.4	chr2	+	2613	4	Antisense	novelGene_ENSMUSG00000053141.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTACACATCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	161792356	161819706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_161792456_161804177_161804211_161815656_161815772_161817340
ES.2064.1	chr1	-	189	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCATCCTACCATGAC	NA	False	NA	NA	False	NA	NA	NA	180766784	180766595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180766600_180766800
ES.20640.1	chr2	-	4309	1	Intergenic	novelGene_17074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGTAATGAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	161808037	161803728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_161803700_161808000
ES.20641.1	chr2	+	5239	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	-1	2656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.59966329107444	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGTGCCTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	162232731	162238521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232759_162233218_162233474_162233514_162238330_162238379
ES.20641.10	chr2	+	721	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.4169199583031	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGTGCCTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	162232733	162238521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232759_162232933_162233118_162233218_162233320_162238066_162238330_162238373
ES.20641.11	chr2	+	604	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	2	2656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.0832371053374	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGTGCCTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	162232734	162238521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232958_162233218_162233320_162238191_162238330_162238379
ES.20641.12	chr2	+	849	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	3	2655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.2621655221252	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGAGTGCCTGTGTT	NA	False	NA	9	True	ATTAAA	-20	NA	162232735	162238520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232958_162233218_162233320_162236359_162236484_162238066_162238330_162238381
ES.20641.13	chr2	+	4032	2	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1703	2649	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATTTAAGAGTGCC	NA	False	NA	3	True	ATTAAA	-14	NA	162234435	162238514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162238347_162238393
ES.20641.14	chr2	+	3000	2	Antisense	novelGene_ENSMUSG00000053141.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAATTTCCTGACCACT	NA	False	NA	NA	False	AATAAA	-15	NA	162237752	162240801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_162238333_162238381
ES.20641.2	chr2	+	839	6	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	0	2649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8830483816451	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATTTAAGAGTGCC	NA	False	NA	3	True	ATTAAA	-14	NA	162232732	162238514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232759_162232933_162233118_162233218_162233320_162236359_162236484_162238066_162238330_162238373
ES.20641.3	chr2	+	677	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	0	2656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1594912508182	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGTGCCTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	162232732	162238521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232766_162233212_162233320_162236359_162236484_162238066_162238326_162238367
ES.20641.4	chr2	+	5738	2	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	0	2655	intron_retention	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGAGTGCCTGTGTT	NA	False	NA	9	True	ATTAAA	-20	NA	162232732	162238520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162238330_162238379
ES.20641.5	chr2	+	881	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.1576417557513	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTGGATTTAAGAGTG	NA	False	NA	1	True	ATTAAA	-12	NA	162232733	162238512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162233118_162233218_162233320_162238066_162238330_162238379
ES.20641.6	chr2	+	861	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.2621655221252	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGAGTGCCTGTGTT	NA	False	NA	9	True	ATTAAA	-20	NA	162232733	162238520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232958_162233218_162233320_162236359_162236484_162238066_162238330_162238371
ES.20641.7	chr2	+	7776	3	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	4954	intron_retention	FALSE	non_canonical	0	0	junction_2	39	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATTTGCATTTTAA	NA	False	NA	NA	False	AATAAA	-33	NA	162232733	162240819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232958_162233218_162238335_162238383
ES.20641.8	chr2	+	1014	5	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.2176223927187	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGAGTGCCTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	162232733	162238521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162233118_162233218_162233320_162236359_162236484_162238066_162238330_162238379
ES.20641.9	chr2	+	728	4	NNC	ENSMUSG00000084919.2	novel	630	3	NA	NA	1	2654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.6386021641143	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTAAGAGTGCCTGTGT	NA	False	NA	8	True	ATTAAA	-19	NA	162232733	162238519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162232958_162233218_162233320_162238066_162238330_162238379
ES.20642.1	chr2	+	178	1	Intergenic	novelGene_17075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATGATACTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	162380868	162381046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162380900_162381000
ES.20643.1	chr2	+	244	1	Intergenic	novelGene_17076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAATGTAG	NA	False	NA	NA	False	NA	NA	NA	162499974	162500218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162500000_162500200
ES.20644.1	chr2	+	3730	7	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	-252	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	342.099238363503	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773195	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773296_162773344_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.10	chr2	+	3520	6	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	371.089746557352	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTTCTTCATTTA	NA	False	NA	14	True	AATAAA	-15	NA	162773447	162779038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774055_162775341_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.11	chr2	+	2026	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-326	0	144	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGCTGTTAATCTAC	NA	False	NA	9	True	AATAAA	-22	NA	162773447	162777272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.12	chr2	+	1882	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	-34	-182	0	0	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGATTGCCTTATTGAA	NA	False	NA	14	True	AATAAA	-12	NA	162773447	162777128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.13	chr2	+	1673	7	NNC	ENSMUSG00000016921.15	novel	1666	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	418.492931043445	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGATTGCCTTATTGAA	NA	False	NA	14	True	AATAAA	-12	NA	162773447	162777128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162774943_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.14	chr2	+	3586	7	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	418.492931043445	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773447	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162774943_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.15	chr2	+	4777	6	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	0	1196	intron_retention	FALSE	non_canonical	0	0	junction_5	370.950454912782	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGTAATTGACACTAG	NA	False	NA	NA	False	AATAAA	-21	NA	162773447	162780237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162779784_162779829
ES.20644.16	chr2	+	4681	7	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	0	1196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	342.099238363503	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGTAATTGACACTAG	NA	False	NA	NA	False	AATAAA	-21	NA	162773447	162780237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331_162779784_162779825
ES.20644.17	chr2	+	4649	7	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	0	1196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	342.099238363503	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGTAATTGACACTAG	NA	False	NA	NA	False	AATAAA	-21	NA	162773447	162780237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331_162779810_162779883
ES.20644.18	chr2	+	1807	7	NNC	ENSMUSG00000016921.15	novel	1666	7	NA	NA	3	137	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	418.492931043445	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTATTTTGTGCTGTT	NA	False	NA	2	True	AATAAA	-15	NA	162773450	162777265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773698_162773913_162774063_162774943_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.19	chr2	+	4464	6	NIC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	72	junction_2	342.507576558534	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773450	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162773698_162773913_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.2	chr2	+	3702	7	NNC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	342.099238363503	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773230	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773304_162773345_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.20	chr2	+	2254	4	ISM	ENSMUSG00000016921.15	ENSMUST00000193611.6	2897	5	1003	-144	870	144	3prime_fragment	FALSE	canonical	3	867	junction_3	54.1376845541891	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGCTGTTAATCTAC	NA	False	NA	9	True	AATAAA	-22	NA	162774450	162777272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.21	chr2	+	2038	4	ISM	ENSMUSG00000016921.15	ENSMUST00000193611.6	2897	5	1075	0	942	0	3prime_fragment	FALSE	canonical	3	867	junction_3	54.1376845541891	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGATTGCCTTATTGAA	NA	False	NA	14	True	AATAAA	-12	NA	162774522	162777128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.22	chr2	+	3852	4	ISM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	1171	3	1038	-3	3prime_fragment	FALSE	canonical	3	867	junction_3	54.1376845541891	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTTCTTCATTTA	NA	False	NA	14	True	AATAAA	-15	NA	162774618	162779038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.23	chr2	+	4188	3	NIC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	1067	-3	intron_retention	FALSE	canonical	3	867	junction_2	66	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTTCTTCATTTA	NA	False	NA	14	True	AATAAA	-15	NA	162774647	162779038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162775471_162775573_162776232_162776331
ES.20644.3	chr2	+	3969	8	NNC	ENSMUSG00000016921.15	novel	1666	7	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.787106960002	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773230	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773303_162773345_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.4	chr2	+	1931	7	NNC	ENSMUSG00000016921.15	novel	1666	7	NA	NA	-215	144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	342.099238363503	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGCTGTTAATCTAC	NA	False	NA	9	True	AATAAA	-22	NA	162773232	162777272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162773304_162773345_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.5	chr2	+	3783	5	NIC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	-40	0	intron_retention	FALSE	canonical	3	865	junction_1	54.5361118892794	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773407	162779041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.6	chr2	+	1957	7	NIC	ENSMUSG00000016921.15	novel	1666	7	NA	NA	-40	138	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	422.92066500573	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTATTTTGTGCTGTTA	NA	False	NA	3	True	AATAAA	-16	NA	162773407	162777266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162773698_162773913_162774063_162774734_162774900_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.7	chr2	+	1650	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	-36	1913	-36	0	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGATTGCCTTATTGAA	NA	False	NA	14	True	AATAAA	-12	NA	162773411	162777128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ES.20644.8	chr2	+	3338	5	NIC	ENSMUSG00000016921.15	novel	3527	6	NA	NA	-25	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	379.675107822464	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGACTTGTTCTTCATT	NA	False	NA	12	True	AATAAA	-13	NA	162773422	162779036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162773698_162773913_162774063_162775345_162775471_162776147_162776232_162776331
ES.20645.1	chr2	-	183	1	Intergenic	novelGene_17077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAATATG	NA	False	NA	NA	False	NA	NA	NA	162776095	162775912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162775900_162776100
ES.20646.1	chr2	-	579	1	Intergenic	novelGene_17078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTGTTCACTT	NA	False	NA	NA	False	AGTAAA	-15	NA	162797413	162796834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162796800_162797400
ES.20647.1	chr2	+	132	1	Intergenic	novelGene_17079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162812250	162812382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162812200_162812400
ES.20648.1	chr2	-	179	1	Intergenic	novelGene_17080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	162830919	162830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162830700_162830900
ES.20649.1	chr2	+	1650	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11859	-10	1077	10	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTGCCTCAACACC	NA	False	NA	24	True	ATTAAA	-25	NA	162841108	162856057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
ES.20649.2	chr2	+	4128	4	NIC	ENSMUSG00000017868.17	novel	2693	14	NA	NA	1079	0	intron_retention	FALSE	canonical	3	14	junction_3	4.18993502999218	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTACTGGGTATGGTT	NA	False	NA	13	True	ATTAAA	-14	NA	162841110	162856046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162841189_162845191_162845288_162846066_162848804_162854829
ES.20649.3	chr2	+	4193	4	NNC	ENSMUSG00000017868.17	novel	2693	14	NA	NA	1154	0	intron_retention	FALSE	canonical	0	0	junction_1	9.84321537348893	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTACTGGGTATGGTTG	NA	False	NA	14	True	ATTAAA	-15	NA	162841185	162856047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162841328_162845191_162845288_162846066_162848804_162854829
ES.20649.4	chr2	+	177	1	Intergenic	novelGene_17081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	162849982	162850159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162850000_162850200
ES.2065.1	chr1	+	3386	23	NIC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	-21	2	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	10.7857611983624	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180769887	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180770076_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.10	chr1	+	3533	23	NNC	ENSMUSG00000026519.17	novel	704	3	NA	NA	-258	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3524490385799	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180773212	180802668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180773550_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.11	chr1	+	3647	24	NNC	ENSMUSG00000026519.17	novel	704	3	NA	NA	-248	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8898920307735	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180773222	180802669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180773550_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180794884_180795008_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.12	chr1	+	3198	22	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	2529	0	602	0	3prime_fragment	FALSE	canonical	3	28	junction_4	8.29965985697586	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180774128	180802668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.13	chr1	+	2674	17	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	11957	-2	-4075	2	3prime_fragment	FALSE	canonical	3	29	junction_8	8.347903928532	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180783556	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.14	chr1	+	1963	10	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	5170	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1836494255019	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180792801	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180792955_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.15	chr1	+	2097	9	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	21216	0	5184	0	3prime_fragment	FALSE	canonical	3	35	junction_5	8.24621125123532	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180792815	180802668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.16	chr1	+	3344	7	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	6413	1679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.6933120340652	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTTGTTTGCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	180794044	180804356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800226_180800397_180800704_180800768_180801733
ES.2065.17	chr1	+	1135	3	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	28662	-2	12630	2	3prime_fragment	FALSE	canonical	3	41	junction_2	2	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180800261	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180800397_180800704_180800768_180801733
ES.2065.2	chr1	+	3422	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	-123	7	-8	2	multi-exon	FALSE	canonical	3	13	junction_1	9.65307299163423	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180769900	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.3	chr1	+	4981	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	7	-1682	7	1682	multi-exon	FALSE	canonical	3	13	junction_1	9.65307299163423	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTTTGCTGTGTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	180770030	180804359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.4	chr1	+	3325	23	NNC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	12.1785104057302	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180770087	180802668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800493_180800708_180800768_180801733
ES.2065.5	chr1	+	5011	22	NIC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	-37	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.67358420093178	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTCTCATGCTTCTT	NA	False	NA	9	True	AATAAA	-25	NA	180770101	180802671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.6	chr1	+	3521	22	NIC	ENSMUSG00000026519.17	novel	3306	23	NA	NA	-31	0	intron_retention	FALSE	canonical	3	13	junction_1	9.71731978762021	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	False	NA	6	True	AATAAA	-22	NA	180770107	180802668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800768_180801733
ES.2065.7	chr1	+	3326	23	NIC	ENSMUSG00000026519.17	novel	654	7	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	10.7857611983624	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTCATGCTTCT	NA	False	NA	8	True	AATAAA	-24	NA	180770126	180802670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180770255_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.8	chr1	+	3294	23	NNC	ENSMUSG00000026519.17	novel	654	7	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	13.2115651815163	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCCTCTCATGCTTC	NA	False	NA	7	True	AATAAA	-23	NA	180770132	180802669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180770255_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785566_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.2065.9	chr1	+	3395	23	NNC	ENSMUSG00000026519.17	novel	547	2	NA	NA	170	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3524490385799	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATTTTCCACGTCTGT	NA	False	NA	40	True	NA	NA	NA	180770308	180802702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180770474_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ES.20650.1	chr2	+	4253	24	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	2248	13	NA	NA	65	982	multi-exon	FALSE	non_canonical	0	0	junction_11	1417.6449466305	3325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCCTCTGAGTCCTG	NA	False	NA	NA	False	AATAAA	-26	NA	162859338	162925601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162882546_162882635_162884610_162884720_162887122_162887935_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.100	chr2	+	2853	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	976	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	1081.06191179916	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896536	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.101	chr2	+	2978	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	975	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	1052.98402269019	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896536	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162921770_162922042_162922637_162922743_162924469_162924620_162925085
ES.20650.102	chr2	+	2978	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	981	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	1081.75462154062	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896536	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.103	chr2	+	6562	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	-1	intron_retention	FALSE	canonical	3	2774	junction_1	169.152334883957	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896536	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.105	chr2	+	2190	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-69	976	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	1158.75080215187	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896537	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.106	chr2	+	1044	7	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-69	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1134.72528491359	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896537	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910240_162926438
ES.20650.107	chr2	+	2843	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-69	975	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	1267.96414236623	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896537	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.11	chr2	+	2558	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	122	-432	-15	432	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	162859395	162888493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.110	chr2	+	2712	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-68	976	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	1269.06514070829	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896538	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.111	chr2	+	4428	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	975	intron_retention	FALSE	canonical	1	1	junction_11	1295.01817400603	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896542	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.112	chr2	+	4535	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	-1	intron_retention	FALSE	canonical	3	53	junction_3	853.306522202505	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896542	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.113	chr2	+	2554	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1118.0842587758	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162896542	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916727_162917564_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.114	chr2	+	4394	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	975	intron_retention	FALSE	canonical	2	5	junction_11	1267.9617478784	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896542	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162921770_162922042_162922637_162922743_162924469_162924620_162925085
ES.20650.115	chr2	+	3032	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	-678	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	824.293952853021	3076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGTTGGTGGCAGC	NA	False	NA	NA	False	NA	NA	NA	162896542	162925930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.116	chr2	+	2673	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	975	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	1104.38911331535	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896542	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.117	chr2	+	3751	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	831.577057383658	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896542	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917738_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.119	chr2	+	4286	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	973	intron_retention	FALSE	canonical	1	1	junction_11	1116.02904460519	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162896542	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.12	chr2	+	2213	1	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-15	-3853	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAGTAGAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	162859395	162861608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859400_162861600
ES.20650.120	chr2	+	2807	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1113.07420126189	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896543	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162909960_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.121	chr2	+	2684	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	832.046269195915	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896543	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914841_162916323_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.122	chr2	+	2688	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	829.298084894369	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896543	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906208_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.123	chr2	+	4968	12	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	976	intron_retention	FALSE	canonical	1	21	junction_2	1178.30998881961	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896543	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901489_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.124	chr2	+	1490	9	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1019.95217412387	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896543	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901500_162916656_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.126	chr2	+	2808	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-63	976	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	1252.41989641604	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896543	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.127	chr2	+	4790	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-62	975	intron_retention	FALSE	canonical	0	0	junction_11	1086.24756623337	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896544	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162921770_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.128	chr2	+	2478	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-62	975	combination_of_known_splicesites	FALSE	canonical	1	52	junction_4	848.723301821952	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896544	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.13	chr2	+	3753	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	222	junction_1	54.9119505576845	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859400	162888061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.130	chr2	+	1847	9	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-61	2745	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	1005.34514440315	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTGCTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	162896545	162917808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555
ES.20650.131	chr2	+	1846	9	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-61	8784	-61	2761	5prime_fragment	FALSE	canonical	3	2736	junction_8	181.548202965493	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTAATTTAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	162896545	162917824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555
ES.20650.134	chr2	+	3560	8	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-61	2937	intron_retention	FALSE	canonical	3	27	junction_7	1062.66893494923	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162896545	162918000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916796_162917555
ES.20650.135	chr2	+	2920	8	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-61	8541	-61	3004	intron_retention	FALSE	canonical	3	2774	junction_1	163.451172263419	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCAAACTGCCACAGAAG	NA	False	NA	NA	False	NA	NA	NA	162896545	162918067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301
ES.20650.136	chr2	+	3464	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-60	976	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	829.200063652994	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896546	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162922112_162922355_162922743_162924469_162924620_162925085
ES.20650.138	chr2	+	3300	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	1095.87724985309	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896547	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085_162925853_162926167
ES.20650.139	chr2	+	2763	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-59	976	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	830.79657362411	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896547	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919640_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.14	chr2	+	3614	11	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-6	-241	intron_retention	FALSE	canonical	3	33	junction_8	106.271774239447	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGGAACATGATATTG	NA	False	NA	15	True	AATAAA	-23	NA	162859404	162887820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ES.20650.140	chr2	+	3021	16	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-59	976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1360.77498507284	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896547	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919091_162919151_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.141	chr2	+	2689	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-58	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	823.980302229088	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896548	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903449_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.142	chr2	+	2558	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	865.22727826598	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896549	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916729_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.143	chr2	+	3778	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	827.056025090836	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896549	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916796_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.144	chr2	+	6173	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	976	intron_retention	FALSE	canonical	3	2736	junction_7	195.421223375187	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896549	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.145	chr2	+	5531	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	970	intron_retention	FALSE	canonical	3	2774	junction_1	169.152334883957	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162896549	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.146	chr2	+	4237	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	976	intron_retention	FALSE	canonical	1	1	junction_11	1295.81305266447	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896549	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.147	chr2	+	3284	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	-1	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896549	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.148	chr2	+	2743	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1080.18223377505	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162896549	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919091_162919151_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.149	chr2	+	4610	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-57	970	intron_retention	FALSE	canonical	2	4	junction_9	830.536420370672	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162896549	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162919617_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.15	chr2	+	1999	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-6	-241	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGGAACATGATATTG	NA	False	NA	15	True	AATAAA	-23	NA	162859404	162887820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.150	chr2	+	3720	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	830.668092134242	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896553	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.152	chr2	+	2594	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-51	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	822.495222194357	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896555	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924525_162925085
ES.20650.153	chr2	+	7778	11	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-48	975	intron_retention	FALSE	canonical	0	0	junction_8	1242.78738728714	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896558	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.155	chr2	+	2684	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-47	981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	827.394069803236	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896559	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921519_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.157	chr2	+	2562	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-46	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1069.60040459519	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896560	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916383_162916459_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.158	chr2	+	3097	16	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-46	973	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	1341.71352464758	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162896560	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162921770_162922042_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.159	chr2	+	3298	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-46	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	831.577057383658	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896560	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919091_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.16	chr2	+	2168	14	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	131.869309518551	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162859407	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162872252_162872313_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.160	chr2	+	4209	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-46	974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	831.577057383658	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162896560	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162918179_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.161	chr2	+	3176	1	Genic_Genomic	ENSMUSG00000017861.12	novel	NA	NA	NA	NA	-38	-6650	mono-exon	FALSE	NA	NA	NA	NA	NA	2629	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAGTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	162896568	162899744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_162896600_162899700
ES.20650.162	chr2	+	4826	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-36	972	intron_retention	FALSE	canonical	2	5	junction_11	1114.30241398935	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896570	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162919810_162921513_162921628_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.163	chr2	+	3218	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1124.2357002525	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896570	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.164	chr2	+	2195	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-30	971	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1124.2357002525	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCCCGACTCTGCCC	NA	False	NA	NA	False	AATAAA	-15	NA	162896576	162925590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.165	chr2	+	2563	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-28	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	804.216985137515	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896578	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916544_162916645_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.167	chr2	+	3938	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	1081.75462154062	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTGACTCCTCCTTT	NA	False	NA	24	True	NA	NA	NA	162896582	162926606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.168	chr2	+	2630	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-22	972	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_2	818.499615944794	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896584	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901489_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.169	chr2	+	2682	14	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-22	975	combination_of_known_splicesites	FALSE	canonical	3	23	junction_9	1276.60590592918	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896584	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.17	chr2	+	3815	25	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	2248	13	NA	NA	-3	973	multi-exon	FALSE	canonical	2	25	junction_3	1405.86770112111	3325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162859407	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162859577_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887297_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.170	chr2	+	2648	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-21	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	829.200063652994	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896585	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922648_162922743_162924469_162924620_162925085
ES.20650.173	chr2	+	5215	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-21	973	intron_retention	FALSE	canonical	2	5	junction_10	1316.3701643999	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162896585	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162921628_162921770_162922042_162922637_162922743_162924469_162924620_162925085
ES.20650.174	chr2	+	2636	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-20	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	827.394069803236	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896586	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919788_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.175	chr2	+	5721	12	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-19	975	intron_retention	FALSE	canonical	0	0	junction_9	897.857661417047	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896587	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.177	chr2	+	2683	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1079.83690425727	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162896588	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919213_162919244_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.178	chr2	+	2568	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1139.80133198242	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162896588	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901568_162904376_162904400_162906196_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.179	chr2	+	2661	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	827.394069803236	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896588	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921507_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.18	chr2	+	2100	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	129.639614902491	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162859408	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.180	chr2	+	2536	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	834.053089565057	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162896588	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903465_162904439_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.181	chr2	+	3524	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	834.411708575739	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTGACTCCTCCTTT	NA	False	NA	24	True	NA	NA	NA	162896588	162926606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896626_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.182	chr2	+	1654	9	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-18	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1019.95217412387	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896588	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901501_162916451_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.185	chr2	+	2168	10	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-11	975	combination_of_known_splicesites	FALSE	canonical	1	29	junction_1	970.28015554628	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896595	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.188	chr2	+	2188	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	11	977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1140.02639772068	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGACTCTGCCCTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	162896617	162925596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922726_162924469_162924620_162925085
ES.20650.189	chr2	+	2510	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	76	975	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	833.366005671148	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896682	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896718_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.19	chr2	+	4448	26	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	2248	13	NA	NA	0	969	multi-exon	FALSE	non_canonical	0	0	junction_13	1388.06613675286	3325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCGCCCCGACTCTGC	NA	False	NA	NA	False	AATAAA	-13	NA	162859410	162925588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887935_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.190	chr2	+	2525	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	141	975	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_7	830.485364608192	3069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896747	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914864_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.191	chr2	+	3607	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-1315	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	834.411708575739	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162899953	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162900073_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.192	chr2	+	3566	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-169	-1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	819.254105843131	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162901099	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.193	chr2	+	2529	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-144	976	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	819.254105843131	3043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162901124	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.194	chr2	+	2483	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-143	974	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_12	1103.89878727372	3043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162901125	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924512_162924620_162925085
ES.20650.195	chr2	+	3031	12	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	4721	1017	59	972	intron_retention	FALSE	canonical	3	2736	junction_7	156.765182084701	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162901327	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469
ES.20650.196	chr2	+	2630	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	60	972	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	864.642026120251	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162901328	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919640_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.197	chr2	+	3578	13	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	4723	2	61	-2	3prime_fragment	FALSE	canonical	3	2736	junction_7	168.068851631969	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTGACTCCTCCTTT	NA	False	NA	24	True	NA	NA	NA	162901329	162926606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.198	chr2	+	2481	13	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	4805	1017	143	972	3prime_fragment	FALSE	canonical	3	2736	junction_7	168.068851631969	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162901411	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.199	chr2	+	4007	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	181	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1400.3451414941	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162901449	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919213_162919617_162919706_162919810_162921513_162921628_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.2	chr2	+	1946	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	69	233	-68	-233	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGATATTGATGTGACT	NA	False	NA	23	True	AATAAA	-31	NA	162859342	162887828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.20	chr2	+	3818	26	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	2248	13	NA	NA	4	976	multi-exon	FALSE	canonical	2	30	junction_13	1384.61383728461	3325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162859414	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887297_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.200	chr2	+	3650	11	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	218	970	intron_retention	FALSE	canonical	1	52	junction_3	925.951920998061	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162901486	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162901515_162903443_162903516_162904376_162904470_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.201	chr2	+	3461	13	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	342	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	857.6004152414	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162901610	162926608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162901677_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.202	chr2	+	2485	13	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	1976	972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1134.96031195907	3043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162903244	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162903357_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924615_162925085
ES.20650.203	chr2	+	1967	11	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	2173	982	combination_of_known_splicesites	FALSE	canonical	3	127	junction_5	897.760302085139	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCCTCTGAGTCCTG	NA	False	NA	NA	False	AATAAA	-26	NA	162903441	162925601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.205	chr2	+	2711	5	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7568	8563	2906	2982	intron_retention	FALSE	canonical	3	2892	junction_2	101.170647917269	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAGAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	162904174	162918045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301
ES.20650.206	chr2	+	2412	11	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7674	1007	3012	982	3prime_fragment	FALSE	canonical	3	2736	junction_5	164.584932481683	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCCTCTGAGTCCTG	NA	False	NA	NA	False	AATAAA	-26	NA	162904280	162925601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.207	chr2	+	4421	10	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	3013	981	intron_retention	FALSE	canonical	3	2736	junction_5	173.427609689084	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162904281	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.208	chr2	+	3556	12	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	3013	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	1373.62886105887	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTGACTCCTCCTTT	NA	False	NA	24	True	NA	NA	NA	162904281	162926606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162923068_162923214_162924469_162924620_162925085
ES.20650.209	chr2	+	3418	11	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7675	0	3013	0	3prime_fragment	FALSE	canonical	3	2736	junction_5	164.584932481683	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162904281	162926608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.21	chr2	+	3809	26	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	2248	13	NA	NA	8	981	multi-exon	FALSE	canonical	2	30	junction_13	1391.82267606186	3325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162859418	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887297_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.210	chr2	+	4063	4	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	7690	8556	3028	2989	intron_retention	FALSE	canonical	3	2892	junction_2	116.819899370308	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAAAGAAAACCATC	NA	False	NA	NA	False	NA	NA	NA	162904296	162918052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543
ES.20650.212	chr2	+	2476	12	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	3062	976	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	1195.22891061099	3043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162904330	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.213	chr2	+	1925	10	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	3067	973	combination_of_known_splicesites	FALSE	canonical	3	127	junction_4	944.98388515883	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162904335	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.215	chr2	+	2100	10	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	3093	972	combination_of_known_splicesites	FALSE	canonical	1	52	junction_1	963.152283383918	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162904361	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162904470_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.216	chr2	+	2929	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-3883	973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1517.21447505407	3043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162906248	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917738_162917838_162917956_162919706_162919810_162921513_162921628_162921770_162922042_162922377_162922447_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.217	chr2	+	2037	10	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-312	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	979.269569060986	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162909819	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162909862_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.218	chr2	+	1988	9	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	1242	975	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1331.73654841151	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162911373	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162911532_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.22	chr2	+	2310	14	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	8	408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	103.681578993017	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162859418	162888469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162888096_162888296
ES.20650.220	chr2	+	2962	9	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	1284	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1027.57554466813	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTCTGACTCCTCCTT	NA	False	NA	23	True	NA	NA	NA	162911415	162926605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162911532_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.221	chr2	+	1837	8	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	17934	1015	-2124	974	3prime_fragment	FALSE	canonical	3	2736	junction_2	181.124942782487	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162914540	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.222	chr2	+	1773	8	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-2020	972	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1087.70616155171	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162914644	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162914835_162916301_162916725_162917555_162917738_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.223	chr2	+	3351	9	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-1845	976	intron_retention	FALSE	non_canonical	0	0	junction_2	1559.45759801285	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162914819	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162916725_162917555_162917696_162919091_162919151_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.224	chr2	+	4039	7	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-1845	-1	intron_retention	FALSE	canonical	3	2736	junction_1	195.581753295706	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162914819	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.225	chr2	+	3492	6	NIC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-1844	976	intron_retention	FALSE	canonical	3	2736	junction_1	174.526330391721	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162914820	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469
ES.20650.226	chr2	+	3991	8	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-1786	973	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1532.93582543365	3042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCCCGACTCTGCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	162914878	162925592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162916725_162917555_162917696_162919711_162919810_162921513_162922207_162922450_162922743_162922948_162923214_162924469_162924620_162925085
ES.20650.227	chr2	+	2509	8	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-195	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1408.24931118356	3061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162916469	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.228	chr2	+	3641	4	ISM	ENSMUSG00000017861.12	ENSMUST00000142729.3	789	7	1861	-1988	1453	-1	3prime_fragment	FALSE	canonical	3	2909	junction_3	131.995791178692	3029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162918525	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162919810_162921513_162921628_162922637_162922743_162924469
ES.20650.229	chr2	+	3350	4	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	1968	974	intron_retention	FALSE	canonical	3	2909	junction_2	170.282771360529	3010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162919040	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.23	chr2	+	2211	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162859427	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.24	chr2	+	2341	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-5	408	combination_of_known_splicesites	FALSE	canonical	3	33	junction_9	101.459677289564	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162859433	162888469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ES.20650.25	chr2	+	4165	11	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-3	-241	intron_retention	FALSE	canonical	3	222	junction_1	55.254321097992	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGGAACATGATATTG	NA	False	NA	15	True	AATAAA	-23	NA	162859435	162887820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.26	chr2	+	1632	11	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-3	-248	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	117.146446809112	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCTCATCTGGAACAT	NA	False	NA	8	True	AATAAA	-16	NA	162859435	162887813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.27	chr2	+	2192	13	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	128.877498898071	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162859436	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867371_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.28	chr2	+	3467	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-2	-250	intron_retention	FALSE	canonical	3	222	junction_1	54.9119505576845	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGCTCATCTGGAAC	NA	False	NA	6	True	AATAAA	-14	NA	162859436	162887811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.29	chr2	+	1828	12	NIC	ENSMUSG00000017858.13	novel	874	8	NA	NA	15	-233	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	129.639614902491	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGATATTGATGTGACT	NA	False	NA	23	True	AATAAA	-31	NA	162859453	162887828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.3	chr2	+	2202	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	102	-56	-35	56	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAGATTTATT	NA	False	NA	75	True	NA	NA	NA	162859375	162888117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.30	chr2	+	335	1	Intergenic	novelGene_17082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCATT	NA	False	NA	NA	False	NA	NA	NA	162860369	162860704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162860400_162860700
ES.20650.31	chr2	+	2066	12	ISM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	5019	4	-70	-4	3prime_fragment	FALSE	canonical	3	288	junction_2	42.4608716330071	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTCTGTCATTGATA	NA	False	NA	15	True	ATTAAA	-27	NA	162864292	162888057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.32	chr2	+	4390	10	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-70	0	intron_retention	FALSE	canonical	3	305	junction_5	38.8100788742077	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162864292	162888061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162864420_162865269_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.33	chr2	+	1666	8	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	7118	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.185372845606	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162871480	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162871576_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.34	chr2	+	1450	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9557	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.126494677647	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAATGGTCTGTCATTG	NA	False	NA	12	True	ATTAAA	-24	NA	162873919	162888054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887106
ES.20650.35	chr2	+	1590	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9557	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162873919	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.36	chr2	+	3775	18	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	789	7	NA	NA	9570	979	multi-exon	FALSE	non_canonical	0	0	junction_5	1407.83152106191	3321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCTGCCCTCTGAGTC	NA	False	NA	NA	False	AATAAA	-23	NA	162873932	162925598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122_162887935_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.37	chr2	+	3798	4	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9582	408	intron_retention	FALSE	canonical	1	3	junction_3	14.6363322667334	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162873944	162888469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874156_162875154_162875224_162882546_162884718_162887122
ES.20650.38	chr2	+	994	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9586	-248	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	194.882657001592	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGCTCATCTGGAACAT	NA	False	NA	8	True	AATAAA	-16	NA	162873948	162887813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162873986_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ES.20650.39	chr2	+	1379	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9590	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	157.758549689074	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTCTGTCATTGATA	NA	False	NA	15	True	ATTAAA	-27	NA	162873952	162888057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162873976_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.4	chr2	+	1782	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-34	-233	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGATATTGATGTGACT	NA	False	NA	23	True	AATAAA	-31	NA	162859376	162887828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.40	chr2	+	1804	7	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9590	4093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	176.154682657664	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCCAAGG	NA	False	NA	NA	False	NA	NA	NA	162873952	162892154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162888193_162892044
ES.20650.41	chr2	+	1400	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9610	12	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	186.483745940497	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCCTTTTTTCTCATTC	NA	False	NA	31	True	ATTAAA	-43	NA	162873972	162888073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ES.20650.42	chr2	+	3248	19	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	789	7	NA	NA	9610	970	multi-exon	FALSE	canonical	2	30	junction_6	1333.120169303	3321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162873972	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887297_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.43	chr2	+	3883	19	Fusion	ENSMUSG00000017861.12_ENSMUSG00000017858.13	novel	789	7	NA	NA	9613	970	multi-exon	FALSE	non_canonical	0	0	junction_6	1335.76948855078	3321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162873975	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162887935_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.44	chr2	+	1952	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9658	432	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	192.264141222434	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	162874020	162888493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162874336_162875154_162875224_162882546_162882635_162884610_162884720_162887122
ES.20650.45	chr2	+	1505	5	ISM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	15487	249	10398	-249	3prime_fragment	FALSE	canonical	3	347	junction_3	40.2305853797829	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGGCTCATCTGGAACA	NA	False	NA	7	True	AATAAA	-15	NA	162874760	162887812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.46	chr2	+	1259	1	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	22433	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAATGGTCTGTCATTG	NA	False	NA	12	True	ATTAAA	-24	NA	162886795	162888054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162886800_162888100
ES.20650.47	chr2	+	2587	1	Genic_Genomic	ENSMUSG00000017858.13	novel	NA	NA	NA	NA	22937	1825	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTCTGGTTTAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	162887299	162889886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_162887300_162889900
ES.20650.48	chr2	+	3779	1	Intergenic	novelGene_17083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGCCACCTCCCATCT	NA	False	NA	NA	False	NA	NA	NA	162888388	162892167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162888400_162892200
ES.20650.49	chr2	+	5799	12	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-2332	975	intron_retention	FALSE	canonical	0	0	junction_9	1194.83410792233	3071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162894274	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162894534_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.5	chr2	+	1999	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-22	-4	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTCTGTCATTGATA	NA	False	NA	15	True	ATTAAA	-27	NA	162859388	162888057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.50	chr2	+	2648	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-2245	976	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	821.605420780329	3071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162894361	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162894534_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.51	chr2	+	7608	11	NNC	ENSMUSG00000017861.12	novel	606	4	NA	NA	-2135	970	intron_retention	FALSE	canonical	0	0	junction_8	1240.52676311315	3071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162894471	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162894534_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.52	chr2	+	2828	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-184	1007	-184	982	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCCCTCTGAGTCCTG	NA	False	NA	NA	False	AATAAA	-26	NA	162896422	162925601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.53	chr2	+	3836	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-180	-5	-180	5	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCCTCCTTTTTCTGCT	NA	False	NA	31	True	NA	NA	NA	162896426	162926613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.54	chr2	+	7125	11	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-178	976	intron_retention	FALSE	canonical	3	2774	junction_1	177.305950266763	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896428	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.55	chr2	+	3753	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-147	-2	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_12	819.433467159227	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTGACTCCTCCTTT	NA	False	NA	24	True	NA	NA	NA	162896459	162926606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924512_162924620_162925085
ES.20650.56	chr2	+	2837	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-143	-534	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	3079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGCCTGGGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	162896463	162926074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.58	chr2	+	4796	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-142	981	intron_retention	FALSE	canonical	3	2736	junction_8	187.126275695199	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896464	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.59	chr2	+	4238	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-126	983	intron_retention	FALSE	canonical	3	2736	junction_7	187.297650071276	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896480	162925602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.6	chr2	+	2558	14	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-19	3618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	103.681578993017	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGATGGCCTATAGAG	NA	False	NA	NA	False	NA	NA	NA	162859391	162891679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122_162888469_162891658
ES.20650.60	chr2	+	3514	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-109	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	829.200063652994	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896497	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.61	chr2	+	2395	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-109	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1098.62127151483	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896497	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085_162925227_162926167
ES.20650.62	chr2	+	3531	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-108	975	intron_retention	FALSE	canonical	3	97	junction_1	841.487485052511	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896498	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.63	chr2	+	2706	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-108	981	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	809.068256568618	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896498	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.64	chr2	+	2735	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-108	975	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	820.256858312972	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896498	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.65	chr2	+	3588	8	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-108	2989	intron_retention	FALSE	canonical	3	2736	junction_7	192.459590245722	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAAAGAAAACCATC	NA	False	NA	NA	False	NA	NA	NA	162896498	162918052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555
ES.20650.67	chr2	+	4429	7	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-108	8546	-108	2999	intron_retention	FALSE	canonical	3	2774	junction_1	176.202929096602	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCATCAAACTGCCAC	NA	False	NA	NA	False	NA	NA	NA	162896498	162918062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543
ES.20650.68	chr2	+	3719	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-108	5	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	809.068256568618	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCCTCCTTTTTCTGCT	NA	False	NA	31	True	NA	NA	NA	162896498	162926613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.69	chr2	+	2867	15	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-107	981	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	1072.06622929743	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896499	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.7	chr2	+	2112	13	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.912001186152	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGGTCTGTCATTGA	NA	False	NA	13	True	ATTAAA	-25	NA	162859393	162888055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867371_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.70	chr2	+	2658	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-107	976	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_12	796.023304050652	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896499	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924556_162924620_162925085
ES.20650.71	chr2	+	3576	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-107	976	intron_retention	FALSE	canonical	3	2774	junction_1	161.951810390896	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896499	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.72	chr2	+	5044	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-103	981	intron_retention	FALSE	canonical	3	2774	junction_1	169.054590429999	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896503	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.73	chr2	+	2645	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-100	977	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	837.490397954906	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGACTCTGCCCTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	162896506	162925596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.74	chr2	+	2700	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-100	981	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_12	819.433467159227	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896506	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924512_162924620_162925085
ES.20650.75	chr2	+	3244	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-95	970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1115.39797339481	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGCCCCGACTCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	162896511	162925589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162917247_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.76	chr2	+	3732	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-92	-1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	820.256858312972	3089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896514	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.77	chr2	+	2117	9	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-89	8541	-89	3004	5prime_fragment	FALSE	canonical	3	2736	junction_8	181.548202965493	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCAAACTGCCACAGAAG	NA	False	NA	NA	False	NA	NA	NA	162896517	162918067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555
ES.20650.79	chr2	+	2304	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-88	977	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGACTCTGCCCTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	162896518	162925596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.8	chr2	+	2217	14	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	132.678416218229	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAATGGTCTGTCATTG	NA	False	NA	12	True	ATTAAA	-24	NA	162859395	162888054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162866199_162866298_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ES.20650.80	chr2	+	3188	13	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-88	1017	-88	972	intron_retention	FALSE	canonical	3	2736	junction_8	168.284213130314	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCCCGACTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	162896518	162925591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469
ES.20650.81	chr2	+	2796	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-87	976	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	827.056025090836	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896519	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916796_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.82	chr2	+	4207	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-86	975	intron_retention	FALSE	canonical	3	13	junction_3	861.760874927352	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896520	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.83	chr2	+	3851	15	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	1072.06622929743	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896522	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.84	chr2	+	7797	11	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-84	975	intron_retention	FALSE	canonical	0	0	junction_8	936.848653732288	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896522	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.86	chr2	+	4447	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-84	976	intron_retention	FALSE	canonical	3	28	junction_8	851.765209563188	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896522	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.87	chr2	+	2450	13	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-83	971	at_least_one_novel_splicesite	FALSE	canonical	1	52	junction_4	1131.79426133905	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCCCGACTCTGCCC	NA	False	NA	NA	False	AATAAA	-15	NA	162896523	162925590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.88	chr2	+	3112	16	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-83	976	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	1342.38185658511	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTCTGCCCTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	162896523	162925595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162921770_162922042_162922637_162922743_162922948_162923069_162924469_162924620_162925085
ES.20650.89	chr2	+	3426	14	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-82	-1	combination_of_known_splicesites	FALSE	canonical	3	23	junction_9	1281.66528599531	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896524	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.9	chr2	+	1712	8	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	-15	4093	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	117.250647272048	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCCAAGG	NA	False	NA	NA	False	NA	NA	NA	162859395	162892154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162872686_162892022
ES.20650.90	chr2	+	6029	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-81	-1	intron_retention	FALSE	canonical	3	2774	junction_1	169.054590429999	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896525	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.91	chr2	+	2969	16	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-81	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1047.98033484518	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896525	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085_162925227_162925673_162925853_162926167
ES.20650.92	chr2	+	2740	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-80	981	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	830.668092134242	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCCCTCTGAGTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	162896526	162925600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.93	chr2	+	3338	15	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-80	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1235.41688617772	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGACTCTGCCCTCTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	162896526	162925596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162921770_162922092_162922334_162922743_162924469_162924620_162925085
ES.20650.96	chr2	+	2799	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-76	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1118.70498884693	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896530	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906489_162910075_162910236_162914543_162914853_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.97	chr2	+	2779	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-76	974	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	828.939744849839	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCGACTCTGCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	162896530	162925593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922570_162922743_162924469_162924620_162925085
ES.20650.98	chr2	+	2707	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-76	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	834.393299059139	3070	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGACTCTGCCCTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	162896530	162925594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910081_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ES.20650.99	chr2	+	4487	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	829.200063652994	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCCTCCTTTT	NA	False	NA	25	True	NA	NA	NA	162896536	162926607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162922092_162922334_162922743_162924469_162924620_162925085
ES.20651.1	chr2	-	5263	1	Antisense	novelGene_ENSMUSG00000017868.17_AS_novelGene_ENSMUSG00000017858.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	162859363	162854100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_162854100_162859400
ES.20652.1	chr2	-	2096	1	Antisense	novelGene_ENSMUSG00000017858.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	162867910	162865814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_162865800_162867900
ES.20653.1	chr2	-	146	1	Intergenic	novelGene_17084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAATTAAAAA	3967	False	NA	NA	False	NA	NA	NA	162920693	162920547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162920500_162920700
ES.20654.1	chr2	-	897	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1763	3	multi-exon	FALSE	canonical	3	698	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCTGTGCTGGTTGTTTT	906	False	NA	0	True	AATAAA	-20	NA	162931538	162928950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_162929768_162931458
ES.20654.2	chr2	-	790	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1785	0	multi-exon	FALSE	canonical	3	735	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGGCTGTGCTGGTTGT	884	False	NA	-3	True	AATAAA	-17	NA	162931560	162928953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_162929642_162931458
ES.20654.3	chr2	-	2572	1	FSM	ENSMUSG00000070708.6	ENSMUST00000094653.6	822	1	-1754	4	-1754	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTCCGGGCTGTGCTGG	915	False	NA	-7	True	AATAAA	-13	NA	162931529	162928957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_162929000_162931500
ES.20654.4	chr2	-	769	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1754	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTCCGGGCTGTGCTG	915	False	NA	-8	True	AATAAA	-12	NA	162931529	162928958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_162929657_162931458
ES.20654.5	chr2	-	177	1	Intergenic	novelGene_17085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTGTGAGTTAGTTG	919	False	NA	NA	False	NA	NA	NA	162931525	162931348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162931300_162931500
ES.20655.1	chr2	+	175	1	Intergenic	novelGene_17086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTAATTCTTAATGTT	NA	False	NA	NA	False	NA	NA	NA	162955628	162955803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162955600_162955800
ES.20656.1	chr2	+	3417	3	NNC	ENSMUSG00000086152.2	novel	714	3	NA	NA	9	2393	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	162964534	162988272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_162964699_162982755_162983125_162985388
ES.20656.2	chr2	+	684	1	Intergenic	novelGene_17087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	162968593	162969277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_162968600_162969300
ES.20657.1	chr2	-	1273	1	Intergenic	novelGene_17088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCCAACCTGCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	162976652	162975379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_162975400_162976700
ES.20658.1	chr2	+	2934	8	NNC	ENSMUSG00000074607.12	novel	600	3	NA	NA	35606	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.728431359084683	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGTGTCTCCCTGCAC	NA	False	NA	NA	False	AATAAA	-20	NA	163102979	163166090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163103171_163117888_163118135_163156241_163156482_163157714_163157943_163161481_163161563_163162217_163162611_163163340_163163469_163164663
ES.20658.2	chr2	+	2013	3	ISM	ENSMUSG00000074607.12	ENSMUST00000099110.10	2166	9	94865	-863	-150	-5	3prime_fragment	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACAGCCCGTGTCTCCC	NA	False	NA	NA	False	AATAAA	-15	NA	163162147	163166085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163162611_163163340_163163469_163164663
ES.20659.1	chr2	+	176	1	Intergenic	novelGene_17089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTTCACAG	6002	False	NA	NA	False	NA	NA	NA	163211657	163211833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163211700_163211800
ES.2066.1	chr1	-	434	1	Antisense	novelGene_ENSMUSG00000026519.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACCACGCGTTACT	NA	False	NA	NA	False	AATAAA	-20	NA	180769973	180769539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_180769500_180770000
ES.20660.1	chr2	-	168	1	Intergenic	novelGene_17090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTACTCTTGACC	NA	False	NA	NA	False	NA	NA	NA	163245700	163245532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163245500_163245700
ES.20661.1	chr2	+	2640	1	Antisense	novelGene_ENSMUSG00000035399.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGTAAATTGTGACT	NA	False	NA	NA	False	NA	NA	NA	163252451	163255091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_163252500_163255100
ES.20662.1	chr2	+	1443	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	-878	2	-878	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACCAGTCTCTGGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	163260836	163262279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163260800_163262300
ES.20663.1	chr2	-	5886	3	NIC	ENSMUSG00000035399.13	novel	1620	4	NA	NA	44	3	intron_retention	FALSE	canonical	3	389	junction_1	26	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTTTCTTAAG	NA	False	NA	-1	True	NA	NA	NA	163261404	163247738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163253431_163257454_163257576_163261331
ES.20663.2	chr2	-	5376	3	ISM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	0	0	0	0	intron_retention	FALSE	canonical	3	367	junction_1	11	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	-4	True	NA	NA	NA	163261448	163247741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_163249010_163253316_163253431_163257454
ES.20663.4	chr2	-	1492	5	NNC	ENSMUSG00000035399.13	novel	1620	4	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	170.571649168319	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTATTGTGTGTTGTTTCT	NA	False	NA	-5	True	NA	NA	NA	163261402	163247742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163248546_163248626_163249010_163253316_163253431_163257454_163257576_163261331
ES.20663.5	chr2	-	1731	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	-112	1	-112	-1	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTATTGTGTGTTGTTTCT	NA	False	NA	-5	True	NA	NA	NA	163261560	163247742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ES.20663.6	chr2	-	950	3	NNC	ENSMUSG00000035399.13	novel	1620	4	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.5	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTATTGTGTGTTGTTT	NA	False	NA	-7	True	NA	NA	NA	163261406	163247744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163248546_163257501_163257576_163261331
ES.20663.7	chr2	-	1689	5	NNC	ENSMUSG00000035399.13	novel	1620	4	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.312865661245	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGGTATTGTGTGTT	NA	False	NA	-11	True	NA	NA	NA	163261456	163247748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163249010_163249705_163249774_163253316_163253431_163257454_163257576_163261331
ES.20663.8	chr2	-	1129	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	46	445	46	285	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATCTTCATTCTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	163261402	163248186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ES.20664.1	chr2	+	1164	6	NNC	ENSMUSG00000017943.16	novel	2220	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.6	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCAGTGTCTCTGTGCT	NA	False	NA	NA	False	AATACA	-30	NA	163280406	163295871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163280646_163287953_163288147_163289418_163289570_163292485_163292584_163293420_163293536_163295503
ES.20664.2	chr2	+	2430	7	FSM	ENSMUSG00000017943.16	ENSMUST00000109420.10	2475	7	45	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGCTTGTTCCTGAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	163280440	163297244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163292485_163292584_163293420_163293536_163295503_163296149_163296244
ES.20664.3	chr2	+	2058	7	FSM	ENSMUSG00000017943.16	ENSMUST00000109420.10	2475	7	45	372	-12	-23	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATTGCTTTTCATTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	163280440	163296872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163292485_163292584_163293420_163293536_163295503_163296149_163296244
ES.20665.1	chr2	-	4137	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	-88	-82	-88	82	multi-exon	FALSE	canonical	3	58	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTGTGTGTGTGTG	NA	False	NA	74	True	ATTAAA	-14	NA	163314637	163308216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163312039_163314322
ES.20665.10	chr2	-	1572	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	-9	-1942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGTATTAGTTGATGA	NA	False	NA	NA	False	AATAAA	-11	NA	163314558	163310240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163310334_163310795_163312039_163314322
ES.20665.11	chr2	-	1569	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	-20	2418	-20	-2418	multi-exon	FALSE	canonical	3	58	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGATGGTTTCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	163314569	163310716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163312039_163314322
ES.20665.12	chr2	-	1529	2	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	67	-2430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCTGGCACTTGGAT	NA	False	NA	NA	False	NA	NA	NA	163314482	163310728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163312039_163314263
ES.20665.2	chr2	-	3470	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	42	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGAGTTTGCTGTGTTCC	NA	False	NA	-5	True	ATTAAA	-28	NA	163314507	163308295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163310344_163310801_163312039_163314322
ES.20665.4	chr2	-	3492	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCGGAGTTTGCTGTGT	NA	False	NA	-8	True	ATTAAA	-25	NA	163314536	163308298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163310334_163310795_163312039_163314322
ES.20665.6	chr2	-	3543	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCGGAGTTTGCTGTG	NA	False	NA	-9	True	ATTAAA	-24	NA	163314581	163308299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163310334_163310788_163312039_163314322
ES.20665.9	chr2	-	2002	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	25	1940	25	-1940	multi-exon	FALSE	canonical	3	58	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTATTAGTTGATGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	163314524	163310238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163312039_163314322
ES.20666.1	chr2	-	211	1	Intergenic	novelGene_17091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAATAGAAAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	163318629	163318418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163318400_163318600
ES.20667.1	chr2	+	175	1	Intergenic	novelGene_17092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAGACAAGG	6683	False	NA	NA	False	NA	NA	NA	163321178	163321353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163321200_163321400
ES.20668.1	chr2	+	174	1	Intergenic	novelGene_17093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	163341141	163341315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163341100_163341300
ES.20669.1	chr2	+	4288	10	NNC	ENSMUSG00000017950.17	novel	431	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.15470053837925	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTCTACTGGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	163348713	163414825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163348908_163393496_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806_163410930_163411868
ES.20669.2	chr2	+	4278	10	NIC	ENSMUSG00000017950.17	novel	431	3	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.06574033851394	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTCTACTGGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	163348753	163414825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163348908_163393496_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806_163410960_163411868
ES.20669.3	chr2	+	3762	10	NIC	ENSMUSG00000017950.17	novel	431	3	NA	NA	26	-516	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.06574033851394	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGGATGCTATGTTGC	NA	False	NA	NA	False	AATAAA	-25	NA	163348753	163414309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163348908_163393496_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806_163410960_163411868
ES.20669.4	chr2	+	4172	10	NNC	ENSMUSG00000017950.17	novel	431	3	NA	NA	3399	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.06574033851394	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTCTACTGGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	163352126	163414825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163352175_163393496_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806_163410960_163411868
ES.2067.1	chr1	-	158	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAAATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	180778602	180778444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180778400_180778600
ES.20670.1	chr2	-	182	1	Intergenic	novelGene_17094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGCATTATATCTA	NA	False	NA	-3	True	NA	NA	NA	163358957	163358775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163358800_163359000
ES.20671.1	chr2	+	4534	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	-22	-2513	-14	0	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGTGGTTTTTATTC	5677	False	NA	NA	False	AATAAA	-18	NA	163444219	163460933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
ES.20671.3	chr2	+	4401	5	NNC	ENSMUSG00000017679.17	novel	1999	5	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	9.89949493661167	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCATTGTGGTTTTTA	5705	False	NA	NA	False	AATAAA	-15	NA	163444247	163460930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163444335_163449131_163449595_163453678_163453771_163455654_163455766_163457282
ES.20671.4	chr2	+	4477	5	NNC	ENSMUSG00000017679.17	novel	1999	5	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	8.69985632065266	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGAGTGCATTGTGGT	5708	False	NA	NA	False	AATAAA	-10	NA	163444250	163460925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163444335_163449131_163449595_163453678_163453855_163455654_163455766_163457282
ES.20672.1	chr2	-	3593	11	NNC	ENSMUSG00000017707.10	novel	3683	10	NA	NA	-3	-33	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	156.952253886333	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTTCAATAAAGGGTTT	NA	False	NA	NA	False	AATAAA	-29	NA	163487054	163465224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163466203_163466262_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.10	chr2	-	2171	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	14	1498	8	-1498	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCAGAGTTATGTAATG	NA	False	NA	-10	True	ATTAAA	-22	NA	163487037	163466689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.11	chr2	-	1825	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	23	1835	17	-1835	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGTTTAAGTTTTAA	NA	False	NA	NA	False	TATAAA	-18	NA	163487028	163467026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.12	chr2	-	3298	5	NIC	ENSMUSG00000017707.10	novel	3683	10	NA	NA	42	-6196	intron_retention	FALSE	canonical	3	366	junction_1	52.4094457135353	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAAACTTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	163487003	163471387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.13	chr2	-	2825	1	NIC	ENSMUSG00000017707.10	novel	3683	10	NA	NA	12833	-6196	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAAACTTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	163474212	163471387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163471400_163474200
ES.20672.14	chr2	-	208	1	Intergenic	novelGene_17095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAACAACAGTGTACC	NA	False	NA	NA	False	NA	NA	NA	163475246	163475038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163475000_163475200
ES.20672.2	chr2	-	3648	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	0	35	0	-35	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGTTCAATAAAGGGT	NA	False	NA	NA	False	AATAAA	-27	NA	163487051	163465226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.3	chr2	-	3277	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	52	354	46	-354	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGTGTTCAGAATCTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	163486999	163465545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.4	chr2	-	2341	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	-41	1383	-41	-1383	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTATTTGTTTAGA	NA	False	NA	-3	True	ATTAAA	-22	NA	163487092	163466574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ES.20672.8	chr2	-	2359	10	NNC	ENSMUSG00000017707.10	novel	3683	10	NA	NA	-14	-1400	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	164.427476602083	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTTCTTGTTTGT	NA	False	NA	-20	True	ATTAAA	-5	NA	163487065	163466591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481310_163486917
ES.20673.1	chr2	+	158	1	Intergenic	novelGene_17096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163490296	163490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163490300_163490500
ES.20674.1	chr2	+	1080	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	-40	-4	-27	0	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATCTTTTCTTTTAAC	8563	False	NA	14	True	AATAAA	-24	NA	163500278	163568078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
ES.20674.2	chr2	+	961	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	20	2	7	2	multi-exon	FALSE	canonical	3	64	junction_1	157.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGATCTTTTCTTTTA	8610	False	NA	12	True	AATAAA	-22	NA	163500325	163568076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163500413_163563047_163563222_163567376
ES.20674.3	chr2	+	1199	4	FSM	ENSMUSG00000035268.15	ENSMUST00000126182.8	762	4	-69	-368	-7	1	multi-exon	FALSE	canonical	3	7	junction_1	178.258239641258	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCTTTTCTTTTAACT	8612	False	NA	15	True	AATAAA	-25	NA	163500327	163568079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163500580_163545405_163545476_163563047_163563222_163567376
ES.20674.4	chr2	+	1112	5	FSM	ENSMUSG00000035268.15	ENSMUST00000099105.9	640	5	-6	-466	-6	0	multi-exon	FALSE	canonical	3	7	junction_1	187.314408148439	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTATGATCTTTTCTTT	8613	False	NA	10	True	AATAAA	-20	NA	163500328	163568074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163500413_163501069_163501156_163545405_163545476_163563047_163563222_163567376
ES.20674.6	chr2	+	183	1	Intergenic	novelGene_17097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACAGTTCTGGAGATT	NA	False	NA	NA	False	NA	NA	NA	163501790	163501973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163501800_163502000
ES.20674.7	chr2	+	1735	1	NIC	ENSMUSG00000035268.15	novel	983	3	NA	NA	30378	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTTATGATCTTTT	NA	False	NA	6	True	AATAAA	-16	NA	163566335	163568070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163566300_163568100
ES.20675.1	chr2	-	159	1	Intergenic	novelGene_17098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	163551824	163551665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163551700_163551800
ES.20676.1	chr2	-	4477	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	12	-2801	12	2801	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	163592147	163565702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ES.20676.2	chr2	-	1447	12	NNC	ENSMUSG00000017697.4	novel	1688	12	NA	NA	13	-231	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	19.317700528764	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGCAGCACATGGTGAA	NA	False	NA	-7	True	AATAAA	-17	NA	163592146	163568734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_163568972_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ES.20677.1	chr2	+	1176	2	ISM	ENSMUSG00000027656.8	ENSMUST00000029188.8	1719	5	7972	3	7972	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCGTTTTGTATCTTG	7885	False	NA	NA	False	AATAAA	-18	NA	163670780	163675063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163671030_163674136
ES.20678.1	chr2	+	175	1	Intergenic	novelGene_17099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGCATGAA	8682	False	NA	NA	False	NA	NA	NA	163734363	163734538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163734400_163734500
ES.20679.1	chr2	-	2197	6	FSM	ENSMUSG00000035226.6	ENSMUST00000044734.3	4962	6	-326	3091	-326	-3091	multi-exon	TRUE	canonical	0	0	junction_1	1.26491106406735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGGCTCAAGGAGAGAT	NA	False	NA	NA	False	AATAAA	-42	NA	163760929	163704761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163706042_163706785_163706926_163707372_163707475_163707711_163707825_163721013_163721153_163760506
ES.2068.1	chr1	-	4073	7	NIC	ENSMUSG00000038776.14	novel	1741	9	NA	NA	48	3	intron_retention	FALSE	canonical	3	106	junction_3	19.4543625498813	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCCAGATACCTTGTG	5776	False	NA	0	True	GATAAA	-21	NA	180845086	180817115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180817546_180817957_180818084_180819497_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ES.2068.2	chr1	-	1468	8	NIC	ENSMUSG00000038776.14	novel	1741	9	NA	NA	61	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	51.8128500332826	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGGGCCAGATAC	5789	False	NA	-6	True	GATAAA	-15	NA	180845073	180817121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180817546_180817957_180818084_180819497_180819607_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ES.2068.3	chr1	-	1711	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	26	4	26	-4	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGTGTGGGCCAGATA	5754	False	NA	-7	True	GATAAA	-14	NA	180845108	180817122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ES.2068.4	chr1	-	1969	11	NNC	ENSMUSG00000038776.14	novel	1741	9	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.0235113063943	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGTGTGGGCCAGATA	5757	False	NA	-7	True	GATAAA	-14	NA	180845105	180817122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180841087_180841155_180841528_180841723_180844991
ES.2068.5	chr1	-	1731	9	NNC	ENSMUSG00000038776.14	novel	1741	9	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	48.4237480478329	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTGTGTGGGCCAGAT	5765	False	NA	-8	True	GATAAA	-13	NA	180845097	180817123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844959
ES.20680.1	chr2	+	158	1	Intergenic	novelGene_17100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAACAGTCCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	163785946	163786104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163785900_163786100
ES.20681.1	chr2	+	2989	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	24	0	24	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163836903	163860508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.10	chr2	+	6821	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	212	360	212	-360	intron_retention	FALSE	canonical	3	1333	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTTTCTAGCTGAAC	NA	False	NA	-99	True	TTTAAA	-36	NA	163837091	163860148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163837286_163853521
ES.20681.11	chr2	+	5383	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	214	1796	214	1509	intron_retention	FALSE	canonical	3	1333	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAAAATCGA	NA	False	NA	-14	True	NA	NA	NA	163837093	163858712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163837286_163853521
ES.20681.13	chr2	+	1319	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	228	1466	228	-1466	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAGTTCTAGAGATTC	NA	False	NA	NA	False	AATACA	-19	NA	163837107	163859042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.14	chr2	+	3631	4	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	17717	2	17174	-2	3prime_fragment	FALSE	canonical	3	1292	junction_1	167.082813798029	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCCTGTGGATTGATG	811	False	NA	19	True	AATAAA	-14	NA	163854596	163860506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.2	chr2	+	1068	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	175	1770	175	1535	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCGATTTTTCACAGCC	NA	False	NA	12	True	GATAAA	-24	NA	163837054	163858738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.3	chr2	+	1629	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	179	1205	179	-1205	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCTGTGTGACTAAACC	NA	False	NA	15	True	AATAAA	-19	NA	163837058	163859303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.4	chr2	+	2474	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	179	360	179	-360	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTTTCTAGCTGAAC	NA	False	NA	-99	True	TTTAAA	-36	NA	163837058	163860148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.5	chr2	+	2843	6	NNC	ENSMUSG00000018326.10	novel	3013	6	NA	NA	196	-1207	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	585.447999398751	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACCTGTGTGACTAAA	NA	False	NA	13	True	AATAAA	-17	NA	163837075	163859301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163837286_163853521_163855058_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.6	chr2	+	1204	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	196	1613	196	-1613	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTGAACACTGTGATC	NA	False	NA	NA	False	NA	NA	NA	163837075	163858895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.7	chr2	+	3656	6	NNC	ENSMUSG00000018326.10	novel	3013	6	NA	NA	197	-393	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	585.447999398751	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	163837076	163860115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163837286_163853521_163855058_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.8	chr2	+	2804	6	NNC	ENSMUSG00000018326.10	novel	3013	6	NA	NA	202	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	590.110972614474	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTGTGGATTGATGT	NA	False	NA	20	True	AATAAA	-15	NA	163837081	163860507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163837286_163853521_163853819_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20681.9	chr2	+	2307	6	NNC	ENSMUSG00000018326.10	novel	3013	6	NA	NA	204	-361	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	588.167799186593	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTCTTTCTAGCTGAA	NA	False	NA	NA	False	TTTAAA	-35	NA	163837083	163860147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163837286_163853521_163853684_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ES.20682.1	chr2	-	158	1	Intergenic	novelGene_17101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	163866588	163866430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163866400_163866600
ES.20683.1	chr2	-	176	1	Intergenic	novelGene_17102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	163883967	163883791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163883800_163884000
ES.20684.1	chr2	+	6889	2	Antisense	novelGene_ENSMUSG00000018322.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCCTCACCCTCTCTT	6402	False	NA	NA	False	NA	NA	NA	163897363	163908135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_163902929_163906811
ES.20684.2	chr2	+	1533	1	Antisense	novelGene_ENSMUSG00000018322.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCCTCACCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	163906602	163908135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_163906600_163908100
ES.20684.3	chr2	+	178	1	Antisense	novelGene_ENSMUSG00000018322.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	163907542	163907720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_163907500_163907700
ES.20685.1	chr2	+	175	1	Intergenic	novelGene_17103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGATAAAAAAAGAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	163911509	163911684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_163911500_163911700
ES.20686.1	chr2	-	1920	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	4	-1	4	1	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTCTGACGCATTTG	5885	False	NA	-4	True	ATTAAA	-17	NA	163913085	163895458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ES.20686.2	chr2	-	2321	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	-18	-1	-18	1	multi-exon	FALSE	canonical	3	55	junction_6	196.655155030322	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTCTGACGCATTTG	5930	False	NA	-4	True	ATTAAA	-17	NA	163913040	163895458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
ES.20686.5	chr2	-	1754	6	NIC	ENSMUSG00000018322.11	novel	1923	7	NA	NA	19	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	238.364930306453	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTGGCTCTGACGCAT	5900	False	NA	-7	True	ATTAAA	-14	NA	163913070	163895461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163896428_163896620_163896748_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ES.20686.6	chr2	-	5082	5	NIC	ENSMUSG00000018322.11	novel	2302	7	NA	NA	867	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	257.115124992677	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTGGCTCTGACGCAT	6815	False	NA	-7	True	ATTAAA	-14	NA	163912155	163895461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163896428_163896620_163896748_163902758_163902929_163906811_163906965_163908489
ES.20686.7	chr2	-	3878	6	NIC	ENSMUSG00000018322.11	novel	1923	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	550	junction_2	30.1754867400677	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTGGCTCTGACGCAT	5949	False	NA	-7	True	ATTAAA	-14	NA	163913021	163895461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_163896428_163896620_163896748_163900585_163902929_163906811_163906965_163908489_163908590_163912832
ES.20686.9	chr2	-	3985	5	ISM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	67	1902	0	-1902	5prime_fragment	FALSE	canonical	3	532	junction_1	38.7064271148862	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTCAGCATAGGCTCCG	5948	False	NA	NA	False	NA	NA	NA	163913022	163897361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ES.20687.1	chr2	+	5264	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	-32	0	-32	0	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	18	True	AATAAA	-18	NA	163916025	163997444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.10	chr2	+	4189	4	NIC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	115.965512114594	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTGTCCCCTTTCTT	NA	False	NA	14	True	AATAAA	-14	NA	163916065	163997440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163916168_163921432_163921514_163959888_163960047_163993592
ES.20687.11	chr2	+	4810	8	NIC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	83.8669986907112	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGTCCCCTTTCTTC	NA	False	NA	15	True	AATAAA	-15	NA	163916067	163997441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163916168_163921432_163921514_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.12	chr2	+	7198	13	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.522772687016	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTCCCCTTTCTTCA	NA	False	NA	16	True	AATAAA	-16	NA	163916067	163997442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163921759_163922817_163923442_163924364_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.14	chr2	+	6830	13	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.37904466997	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTGTCCCCTTTCTT	NA	False	NA	14	True	AATAAA	-14	NA	163916078	163997440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163922486_163922817_163923442_163924364_163925177_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.15	chr2	+	5476	9	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	22	50652	22	8015	5prime_fragment	FALSE	canonical	3	232	junction_8	10.0374299499424	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTCTTTTTACCTACA	NA	False	NA	NA	False	AAAAAG	-7	NA	163916079	163946792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329
ES.20687.18	chr2	+	4846	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	24	362	24	-362	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTTCTTTGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	163916081	163997082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.19	chr2	+	1920	11	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	30	-3279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.9997297292362	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCAAACACTTTGC	NA	False	NA	NA	False	NA	NA	NA	163916087	163994165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942332_163942517_163959888_163960047_163993592
ES.20687.2	chr2	+	4353	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	-30	909	-30	-909	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTCAGGAGTTGGGT	NA	False	NA	NA	False	AATAAA	-14	NA	163916027	163996535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.20	chr2	+	3755	12	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	70.6579468605298	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	18	True	AATAAA	-18	NA	163916088	163997444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592_163993817_163995262
ES.20687.21	chr2	+	5260	12	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	93.7822341278802	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACAGTCTGTCCCCTTT	NA	False	NA	11	True	AATAAA	-11	NA	163916089	163997437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163980949_163981017_163993592
ES.20687.22	chr2	+	5054	9	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	2008	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	79.8035674327909	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCCCCTTTCTTCAC	NA	False	NA	17	True	AATAAA	-17	NA	163925524	163997443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163925679_163928414_163928530_163930760_163930915_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.23	chr2	+	6179	1	NIC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	39141	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTGTCCCCTTTCTT	NA	False	NA	14	True	AATAAA	-14	NA	163991261	163997440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163991300_163997400
ES.20687.3	chr2	+	6270	13	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.23584623755	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCCCCTTTCTTCAC	NA	False	NA	17	True	AATAAA	-17	NA	163916028	163997443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163922697_163922817_163923442_163924334_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.5	chr2	+	9289	10	NIC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	214	junction_8	13.3620062070238	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGTCCCCTTTCTTC	NA	False	NA	15	True	AATAAA	-15	NA	163916033	163997441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_163916168_163921432_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.6	chr2	+	6340	13	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	105.235054362445	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTCCCCTTTCTTCA	NA	False	NA	16	True	AATAAA	-16	NA	163916046	163997442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163922486_163922817_163923442_163924212_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.7	chr2	+	5234	11	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.8918804741089	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCCCCTTTCTTCAC	NA	False	NA	17	True	AATAAA	-17	NA	163916047	163997443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930767_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.8	chr2	+	5260	11	NNC	ENSMUSG00000018209.16	novel	5232	11	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.2437028009917	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTGTCCCCTTTCTTC	NA	False	NA	15	True	AATAAA	-15	NA	163916048	163997441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938636_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ES.20687.9	chr2	+	1623	10	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	-1	37156	-1	-1	5prime_fragment	FALSE	canonical	3	214	junction_9	13.5819415328763	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTTTCCTGTTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	163916056	163960288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888
ES.20688.1	chr2	-	4630	9	Antisense	novelGene_ENSMUSG00000085538.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATCTATGAATGCAGA	NA	False	NA	NA	False	NA	NA	NA	163996233	163924749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_163925676_163928411_163928529_163930759_163930926_163938658_163938826_163940357_163940495_163941614_163941742_163942325_163942517_163959888_163960047_163993592
ES.20688.2	chr2	-	157	1	Intergenic	novelGene_17104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	163933385	163933228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163933200_163933400
ES.20688.3	chr2	-	273	1	Intergenic	novelGene_17105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATTTAAACTAGTACTA	NA	False	NA	NA	False	ATTAAA	-20	NA	163937537	163937264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163937300_163937500
ES.20688.4	chr2	-	159	1	Intergenic	novelGene_17106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	163937536	163937377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163937400_163937500
ES.20688.5	chr2	-	176	1	Intergenic	novelGene_17107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTGAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	163938364	163938188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_163938200_163938400
ES.20689.1	chr2	+	3587	2	Intergenic	novelGene_17108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAAACCAAGCAGGGCT	6024	False	NA	NA	False	AAAACA	-9	NA	164001300	164004988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164004667_164004767
ES.2069.1	chr1	+	186	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAGAAAATAACTA	NA	False	NA	NA	False	NA	NA	NA	180846348	180846534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180846300_180846500
ES.20690.1	chr2	-	2339	2	ISM	ENSMUSG00000040164.4	ENSMUST00000045196.4	2712	4	2358	2	2358	-2	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTGGTCATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	164010675	164005540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164006936_164009731
ES.20691.1	chr2	-	467	3	FSM	ENSMUSG00000051769.3	ENSMUST00000063251.3	488	3	6	15	6	-15	multi-exon	FALSE	canonical	3	20	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAAAATACATCCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	164042044	164040797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164040933_164041577_164041737_164041871
ES.20692.1	chr2	-	2546	11	FSM	ENSMUSG00000016995.18	ENSMUST00000103103.10	2304	11	-258	16	-258	-16	multi-exon	FALSE	canonical	0	0	junction_1	0.458257569495584	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTCACGGGGTCGG	9916	False	NA	NA	False	NA	NA	NA	164246792	164231328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164231635_164231712_164231821_164234761_164234915_164235015_164235430_164238644_164238768_164238861_164238985_164239083_164239207_164241651_164241775_164242447_164243018_164243761_164243883_164246410
ES.20693.1	chr2	+	3511	1	Antisense	novelGene_ENSMUSG00000017009.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGGGGACAATAGAAAGA	7567	False	NA	NA	False	AAAACA	-38	NA	164263565	164267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164263600_164267100
ES.20693.2	chr2	+	2659	1	Antisense	novelGene_ENSMUSG00000017009.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAGTAACAGACAACAGT	7567	False	NA	NA	False	NA	NA	NA	164263565	164266224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164263600_164266200
ES.20694.1	chr2	-	2457	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	1	0	-1	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTCAGTTTTATTTTT	NA	False	NA	46	True	AATAAA	-23	NA	164285106	164266167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ES.20694.2	chr2	-	2392	5	NNC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	11424	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.5435032565657	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCAGCCTGTCAGTT	4744	False	NA	38	True	AATAAA	-15	NA	164273682	164266175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164273642
ES.20694.3	chr2	-	1227	6	NNC	ENSMUSG00000017009.4	novel	2458	5	NA	NA	-28	502	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.8568597143318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTCATTCCTTTATG	NA	False	NA	NA	False	CATAAA	-12	NA	164285134	164267317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164267503_164267610_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ES.20694.4	chr2	-	1309	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	-2	1151	-2	502	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTCATTCCTTTATG	NA	False	NA	NA	False	CATAAA	-12	NA	164285108	164267317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ES.20694.5	chr2	-	974	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	1484	0	169	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTAGTAAACATGTCC	NA	False	NA	NA	False	AATATA	-13	NA	164285106	164267650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ES.20695.1	chr2	+	169	1	Intergenic	novelGene_17109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	9973	False	NA	NA	False	NA	NA	NA	164300250	164300419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164300200_164300400
ES.20696.1	chr2	+	1140	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-74	540	-74	-540	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCAGTACCTTTGCTG	NA	False	NA	38	True	AATAAA	-32	NA	164302816	164306888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ES.20696.10	chr2	+	3187	6	NNC	ENSMUSG00000045503.17	novel	1618	6	NA	NA	15	-999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	132.441081239923	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCGTGTCTTTTCATAT	NA	False	NA	NA	False	NA	NA	NA	164302934	164320559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303041_164303212_164303450_164305220_164305289_164309067_164309248_164314057_164314243_164318148
ES.20696.11	chr2	+	1901	8	NNC	ENSMUSG00000090996.2	novel	1369	6	NA	NA	369	-20	intron_retention	FALSE	canonical	0	0	junction_3	139.809929284478	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAATAATATA	NA	False	NA	NA	False	NA	NA	NA	164303255	164332660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303450_164305220_164305289_164306277_164306666_164309067_164309248_164314061_164314243_164330161_164330309_164330487_164330626_164332055
ES.20696.12	chr2	+	986	3	NNC	ENSMUSG00000045503.17	novel	1618	6	NA	NA	9223	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTTGTTTGGCTTTG	NA	False	NA	NA	False	TATAAA	-18	NA	164312451	164316218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164312595_164314057_164314243_164315560
ES.20696.13	chr2	+	1422	5	Fusion	ENSMUSG00000045503.17_ENSMUSG00000017734.16	novel	1338	3	NA	NA	9455	-1	intron_retention	FALSE	canonical	0	0	junction_1	2	66	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACCTCATTCTTCATA	NA	False	NA	NA	False	AATAAA	-17	NA	164312683	164332686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_164313005_164314057_164314243_164330161_164330309_164330487_164330626_164332055
ES.20696.14	chr2	+	159	1	Intergenic	novelGene_17110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5504	False	NA	NA	False	NA	NA	NA	164322984	164323143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164323000_164323100
ES.20696.15	chr2	+	1064	4	FSM	ENSMUSG00000017734.16	ENSMUST00000069385.15	1658	4	85	509	59	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACCTCATTCTTCATA	NA	False	NA	NA	False	AATAAA	-17	NA	164328459	164332686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164328608_164330161_164330309_164330487_164330626_164332055
ES.20696.2	chr2	+	2507	3	NIC	ENSMUSG00000045503.17	novel	641	5	NA	NA	-7	-217	intron_retention	FALSE	canonical	1	1	junction_2	117.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATCTTATAATGCT	NA	False	NA	NA	False	TATAAA	-19	NA	164302883	164316170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164303041_164303212_164303450_164314057
ES.20696.3	chr2	+	1620	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-7	-7	-7	3	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTACTTAAGTCATT	NA	False	NA	NA	False	CATAAA	-21	NA	164302883	164307435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ES.20696.4	chr2	+	5538	5	NNC	ENSMUSG00000045503.17	novel	2001	6	NA	NA	-4	-217	intron_retention	FALSE	canonical	2	3	junction_4	126.64221255174	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATCTTATAATGCT	NA	False	NA	NA	False	TATAAA	-19	NA	164302886	164316170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277_164309248_164314061
ES.20696.5	chr2	+	1286	5	NIC	ENSMUSG00000090996.2	novel	1369	6	NA	NA	21	6	intron_retention	FALSE	canonical	0	0	junction_2	101.049492824061	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACCTCATTCTTCATA	NA	False	NA	NA	False	AATAAA	-17	NA	164302907	164332686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164303041_164303212_164303450_164330161_164330309_164330487_164330626_164332055
ES.20696.6	chr2	+	4244	6	NNC	ENSMUSG00000045503.17	novel	1618	6	NA	NA	-12	-172	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	141.378074679209	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATTCTTTTGTTTGGCT	NA	False	NA	NA	False	TATAAA	-15	NA	164302907	164316215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277_164309248_164314061_164314243_164315560
ES.20696.7	chr2	+	1022	4	NNC	ENSMUSG00000045503.17	novel	1606	4	NA	NA	5	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.462992076147	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCACTCTTCTCGTT	NA	False	NA	1	True	AAAAAG	-31	NA	164302924	164306851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303041_164303212_164303450_164305193_164305289_164306277
ES.20696.8	chr2	+	1071	4	NNC	ENSMUSG00000045503.17	novel	1606	4	NA	NA	7	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.954692959594	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTTATGCCCATGA	NA	False	NA	20	True	AATAAA	-14	NA	164302926	164306870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164303041_164303212_164303450_164305220_164305289_164306218
ES.20696.9	chr2	+	1406	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	36	164	7	-164	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAACTGTGGCAGGAGT	NA	False	NA	10	True	NA	NA	NA	164302926	164307264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ES.20697.1	chr2	+	1706	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	-5	11	-5	-11	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACACAAACACATCACTG	5122	False	NA	NA	False	ATTAAA	-13	NA	164339449	164345029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ES.20697.2	chr2	+	1012	8	ISM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	-4	1531	-4	-50	5prime_fragment	FALSE	canonical	3	60	junction_7	30.8399422959306	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATCAATAACTCTCGAAA	5123	False	NA	NA	False	NA	NA	NA	164339450	164343509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404
ES.20697.3	chr2	+	2321	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	51.0299476342623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	5128	False	NA	6	True	AATAAA	-15	NA	164339455	164350220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349527_164349750
ES.20697.4	chr2	+	2544	12	FSM	ENSMUSG00000017721.16	ENSMUST00000103101.11	2562	12	17	1	2	-1	multi-exon	FALSE	canonical	3	37	junction_9	44.392501786631	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	5129	False	NA	6	True	AATAAA	-15	NA	164339456	164350220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ES.20697.5	chr2	+	2475	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	-4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	51.0299476342623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	5134	False	NA	6	True	AATAAA	-15	NA	164339461	164350220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349448_164349511
ES.20697.6	chr2	+	2155	13	NNC	ENSMUSG00000017721.16	novel	2611	13	NA	NA	-2	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	51.0299476342623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACAGCCTAGCGATGCTT	5136	False	NA	NA	False	GGGGCT	-16	NA	164339463	164350062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349527_164349750
ES.20697.8	chr2	+	1274	6	NNC	ENSMUSG00000017721.16	novel	2562	12	NA	NA	1716	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	24.2206523446418	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	9224	False	NA	6	True	AATAAA	-15	NA	164343551	164350220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194_164349556_164349777
ES.20698.1	chr2	+	137	1	Intergenic	novelGene_17111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGTGTCCATATGG	NA	False	NA	NA	False	NA	NA	NA	164361546	164361683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164361500_164361700
ES.20699.1	chr2	+	1032	8	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-1011	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	249.792730405161	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	111	False	NA	24	True	AATAAA	-30	NA	164403321	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164403384_164403592_164403695_164403888_164404043_164404631_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ES.20699.10	chr2	+	2673	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	190.619411393488	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	104	False	NA	24	True	AATAAA	-30	NA	164404489	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164405069_164405227_164405372_164405976_164406133_164406280_164407859_164409269_164409312_164410254
ES.20699.11	chr2	+	1990	4	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-2	-11	intron_retention	FALSE	canonical	3	47	junction_2	202.00715058851	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTATAACACCTGCTT	111	False	NA	15	True	AATAAA	-21	NA	164404496	164410419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164406133_164407711_164407859_164409269_164409312_164410254
ES.20699.12	chr2	+	880	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	216.583101833915	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACACCTGCTTGCCTCAC	120	False	NA	22	True	AATAAA	-28	NA	164404505	164410426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410254
ES.20699.13	chr2	+	2924	3	NIC	ENSMUSG00000017723.12	novel	558	4	NA	NA	-27	-16	intron_retention	FALSE	canonical	3	497	junction_1	31	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGAAGCTATAACACC	206	False	NA	10	True	AATAAA	-16	NA	164404591	164410414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164404725_164405227_164407859_164410254
ES.20699.14	chr2	+	2330	5	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	1	-4	intron_retention	FALSE	canonical	3	47	junction_3	224.258082351562	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACACCTGCTTGCCTCAC	249	False	NA	22	True	AATAAA	-28	NA	164404634	164410426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164404725_164405227_164405372_164405976_164407859_164409269_164409312_164410254
ES.20699.15	chr2	+	2157	4	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	85	-2	intron_retention	FALSE	canonical	0	0	junction_1	23.4236347876812	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	333	False	NA	24	True	AATAAA	-30	NA	164404718	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164404778_164405976_164407859_164409269_164409312_164410254
ES.20699.16	chr2	+	649	5	NNC	ENSMUSG00000017723.12	novel	398	3	NA	NA	116	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	219.824219548256	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	364	False	NA	24	True	AATAAA	-30	NA	164404749	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164404778_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ES.20699.2	chr2	+	2119	6	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-991	-16	intron_retention	FALSE	canonical	1	1	junction_1	250.532712434923	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGAAGCTATAACACC	131	False	NA	10	True	AATAAA	-16	NA	164403341	164410414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164403384_164403563_164403695_164403888_164405372_164405976_164406133_164407711_164407859_164410254
ES.20699.3	chr2	+	2179	5	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-851	4	intron_retention	FALSE	canonical	3	6	junction_1	221.111397263913	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCCTCACTTTCTTCT	271	False	NA	30	True	AATAAA	-36	NA	164403481	164410434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164403695_164403888_164405372_164405976_164406133_164407711_164407859_164410254
ES.20699.4	chr2	+	1377	11	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-753	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	192.115694309445	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACACCTGCTTGCCTCAC	369	False	NA	22	True	AATAAA	-28	NA	164403579	164410426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164403695_164403888_164404043_164404280_164404395_164404631_164404725_164404910_164405069_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410064_164410147_164410254
ES.20699.5	chr2	+	824	7	NNC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.861854648009	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	1116	False	NA	24	True	AATAAA	-30	NA	164404326	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164404395_164404631_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164409269_164409312_164410254
ES.20699.6	chr2	+	2989	3	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-55	3	intron_retention	FALSE	canonical	3	499	junction_1	30	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCACTTTCTTC	58	False	NA	29	True	AATAAA	-35	NA	164404443	164410433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164405372_164405976_164407859_164410254
ES.20699.7	chr2	+	752	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	-49	-2	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGCTTGCCTCACTT	64	False	NA	24	True	AATAAA	-30	NA	164404449	164410428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
ES.20699.8	chr2	+	599	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	-162	-8	-42	8	multi-exon	FALSE	canonical	3	78	junction_1	240.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCACTTTCTTCTGTTT	71	False	NA	34	True	AATAAA	-40	NA	164404456	164410438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164404725_164407711_164407859_164410254
ES.20699.9	chr2	+	887	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	-37	-1	-37	1	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTGCCTCACTTTCT	76	False	NA	27	True	AATAAA	-33	NA	164404461	164410431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ES.207.1	chr1	-	506	1	FSM	ENSMUSG00000086240.5	ENSMUST00000145844.3	274	1	-11	-221	-11	221	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGAATAAATCTAAGTCA	NA	False	NA	NA	False	AATAAA	-42	NA	28619864	28619358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_28619400_28619900
ES.2070.1	chr1	-	173	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAGGAAA	5148	False	NA	NA	False	NA	NA	NA	180889276	180889103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180889100_180889300
ES.20700.1	chr2	+	177	1	Intergenic	novelGene_17112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	164556405	164556582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164556400_164556600
ES.20701.11	chr2	+	4929	11	NIC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-13	-383	intron_retention	FALSE	canonical	3	563	junction_9	70.1034235968544	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTGAGCCTGCTATAAT	NA	False	NA	19	True	AATAAA	-5	NA	164587920	164610144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164601218_164604988_164605048_164605140_164605202_164607080_164609683_164609782
ES.20701.12	chr2	+	1412	14	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-12	-393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	245.890484113385	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587921	164610134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164606840_164607001_164607080_164607153_164609626_164609683_164609782
ES.20701.13	chr2	+	5023	12	NIC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-12	-393	intron_retention	FALSE	canonical	3	563	junction_9	67.3347380046047	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587921	164610134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.14	chr2	+	3782	12	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-12	-390	intron_retention	FALSE	canonical	1	4	junction_6	259.174372521476	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGGTAGTGAGCCTG	NA	False	NA	12	True	ATTAAA	-12	NA	164587921	164610137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599865_164599978_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164609683_164609782
ES.20701.15	chr2	+	3821	11	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-9	-393	intron_retention	FALSE	canonical	3	30	junction_7	201.454734369783	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587924	164610134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171_164601218_164604988_164605048_164605140_164605202_164607080
ES.20701.16	chr2	+	5090	13	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	-9	-387	intron_retention	FALSE	canonical	0	0	junction_4	253.128576792287	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTAGTGAGCCTGCTA	NA	False	NA	15	True	AATAAA	-1	NA	164587924	164610140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599141_164599206_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.17	chr2	+	7592	10	NIC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	0	-386	intron_retention	FALSE	canonical	3	563	junction_9	72.9562696685529	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTAGTGAGCCTGCTAT	NA	False	NA	16	True	AATAAA	-2	NA	164587933	164610141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164605048_164605140_164605202_164607080
ES.20701.18	chr2	+	961	9	NNC	ENSMUSG00000017299.14	novel	656	9	NA	NA	1	205	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	299.823698196123	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATATAGTATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	164587934	164601684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171_164601218_164601360
ES.20701.19	chr2	+	1105	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-15	1796	2	205	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATATAGTATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	164587935	164601684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
ES.20701.2	chr2	+	1853	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-58	1091	-10	910	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTACGGTTTCTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	164587892	164602389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
ES.20701.20	chr2	+	1229	13	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	2	-393	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	184.14688807821	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587935	164610134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596038_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.21	chr2	+	1460	10	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	212.256890711046	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCTGTTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	164587937	164610526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164607080_164607153_164609626_164609683_164609782
ES.20701.22	chr2	+	1627	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	36	1	5	-1	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCTGTTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	164587938	164610526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.3	chr2	+	1313	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	-5	356	-5	-356	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGTATGCACACCAGA	NA	False	NA	46	True	AATAAA	-32	NA	164587897	164610171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.5	chr2	+	921	8	ISM	ENSMUSG00000017299.14	ENSMUST00000109327.4	656	9	-40	2005	8	-4	5prime_fragment	FALSE	canonical	3	592	junction_6	60.090408076973	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTTGTGTTGTGTT	NA	False	NA	9	True	NA	NA	NA	164587910	164601475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171
ES.20701.6	chr2	+	1101	10	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	8	-387	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	212.256890711046	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTAGTGAGCCTGCTA	NA	False	NA	15	True	AATAAA	-1	NA	164587910	164610140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164607080_164607153_164609626_164609683_164609782
ES.20701.7	chr2	+	3742	12	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	8	-386	intron_retention	FALSE	canonical	3	30	junction_7	193.295517342729	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTAGTGAGCCTGCTAT	NA	False	NA	16	True	AATAAA	-2	NA	164587910	164610141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164609683_164609782
ES.20701.8	chr2	+	1318	14	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	13	-393	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	269.635410207691	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587915	164610134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164595732_164595795_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ES.20701.9	chr2	+	1136	7	NNC	ENSMUSG00000017299.14	novel	656	9	NA	NA	15	-4	intron_retention	FALSE	canonical	3	30	junction_6	256.395148593382	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGTTGTGTTGTGTT	NA	False	NA	9	True	NA	NA	NA	164587917	164601475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599657_164599920_164599978_164601171
ES.20702.1	chr2	+	181	1	Intergenic	novelGene_17113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	164610738	164610919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164610700_164610900
ES.20703.1	chr2	-	8863	2	NNC	ENSMUSG00000086453.8	novel	457	4	NA	NA	11348	5011	intron_retention	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATGAATGATTCAGCGA	8740	False	NA	NA	False	NA	NA	NA	164600191	164591150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164591284_164591461
ES.20703.10	chr2	-	3962	1	Genic_Genomic	ENSMUSG00000086453.8	novel	NA	NA	NA	NA	12550	1134	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCGAAGTATAATTCTTT	9942	False	NA	-3	True	AATAAA	-18	NA	164598989	164595027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164595000_164599000
ES.20703.11	chr2	-	1723	5	NIC	ENSMUSG00000086453.8	novel	676	6	NA	NA	-15	1134	intron_retention	FALSE	canonical	1	2	junction_4	2.95803989154981	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCGAAGTATAATTCTTT	2077	False	NA	-3	True	AATAAA	-18	NA	164611601	164595027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164596225_164601148_164601261_164604463_164604529_164609632_164609871_164611490
ES.20703.12	chr2	-	2104	1	NIC	ENSMUSG00000086453.8	novel	490	5	NA	NA	8937	-4315	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATCCTGTAGTC	6329	False	NA	NA	False	NA	NA	NA	164602602	164600498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164600500_164602600
ES.20703.2	chr2	-	1265	9	NNC	ENSMUSG00000086453.8	novel	676	6	NA	NA	-3	4163	intron_retention	TRUE	canonical	0	0	junction_7	2.78107443266087	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAGCAGGAAAATCATG	2131	False	NA	NA	False	AATAAA	-27	NA	164611547	164591998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164592149_164592624_164592779_164594312_164594409_164595992_164596225_164601148_164601261_164604463_164604529_164604640_164604802_164609632_164609871_164611490
ES.20703.3	chr2	-	2677	7	NNC	ENSMUSG00000086453.8	novel	676	6	NA	NA	6800	3956	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.48409082672781	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGTGGCTTATAAAATTA	8939	False	NA	NA	False	NA	NA	NA	164604739	164592205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164592283_164592624_164592779_164594312_164596222_164597089_164597351_164601148_164601261_164604463_164604529_164604640
ES.20703.4	chr2	-	1490	2	Antisense	novelGene_ENSMUSG00000017299.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCGTGGCTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	164595232	164592208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_164592779_164594312
ES.20703.5	chr2	-	5140	1	Genic_Genomic	ENSMUSG00000086453.8	novel	NA	NA	NA	NA	14190	3952	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGCGTGGCTTATAAA	NA	False	NA	NA	False	NA	NA	NA	164597349	164592209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164592200_164597300
ES.20703.6	chr2	-	3543	1	Genic_Genomic	ENSMUSG00000086453.8	novel	NA	NA	NA	NA	14475	2640	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTTAAAAACACTTT	NA	False	NA	NA	False	NA	NA	NA	164597064	164593521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164593500_164597100
ES.20703.7	chr2	-	1856	4	NIC	ENSMUSG00000086453.8	novel	490	5	NA	NA	-14	1412	intron_retention	TRUE	canonical	2	4	junction_1	0.471404520791032	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACTATTGTAACTAT	2120	False	NA	NA	False	ATTAAA	-17	NA	164611558	164594749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164596225_164601148_164601261_164609632_164609834_164611490
ES.20703.8	chr2	-	4045	2	ISM	ENSMUSG00000086453.8	ENSMUST00000124435.8	490	5	7600	-1191	7600	1191	3prime_fragment	FALSE	canonical	3	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGACAGCTTGCAGGT	9739	False	NA	54	True	ATTAAA	-29	NA	164603939	164594970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164596225_164601148
ES.20703.9	chr2	-	1588	4	NNC	ENSMUSG00000086453.8	novel	676	6	NA	NA	17	1136	intron_retention	FALSE	canonical	0	0	junction_1	2.16024689946929	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAAGTATAATTCTTTTT	2109	False	NA	-1	True	AATAAA	-20	NA	164611569	164595025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164596222_164601148_164601261_164609632_164609834_164611490
ES.20704.1	chr2	+	997	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	-32	2	-32	-2	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTTCTCAAGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	164611785	164614825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ES.20704.10	chr2	+	2412	3	NIC	ENSMUSG00000001403.14	novel	967	6	NA	NA	30	0	intron_retention	FALSE	canonical	3	1606	junction_1	13	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611852	164614827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164612001_164612286_164614147_164614423
ES.20704.11	chr2	+	1146	3	NIC	ENSMUSG00000001403.14	novel	967	6	NA	NA	1471	-3	intron_retention	FALSE	canonical	3	1632	junction_2	17.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTCTCAAGTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	164613293	164614824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164613979_164614086_164614147_164614423
ES.20704.12	chr2	+	6697	2	NNC	ENSMUSG00000001403.14	novel	2191	6	NA	NA	1718	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTGGCTTTGGTGTTTA	16	False	NA	NA	False	AATAAA	-21	NA	164613540	164620742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164616371_164616875
ES.20704.2	chr2	+	977	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	715.889787257787	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTTTTCTCAAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	164611805	164614823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164612005_164613186_164613300_164613773_164613979_164614086_164614147_164614423
ES.20704.7	chr2	+	913	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.889787257787	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATTGTTTTCTCAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	164611852	164614821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164612008_164613204_164613300_164613773_164613979_164614086_164614147_164614423
ES.20704.8	chr2	+	1206	5	ISM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	35	3	30	-3	intron_retention	FALSE	canonical	3	1606	junction_1	46.1810296550434	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTCTCAAGTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	164611852	164614824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086
ES.20704.9	chr2	+	754	7	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	30	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	620.001545696998	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATTGTTTTCTCAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	164611852	164614821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423_164614596_164614767
ES.20705.1	chr2	-	687	6	FSM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	10	3	10	-3	multi-exon	FALSE	canonical	1	1	junction_3	1.16619037896906	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGCTTGACCGACTG	NA	False	NA	NA	False	AATAAA	-13	NA	164621651	164619083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164619254_164619391_164619529_164619650_164619766_164619863_164620008_164620095_164620148_164621582
ES.20706.1	chr2	+	1678	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	-126	1038	42	148	multi-exon	FALSE	canonical	3	13	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGCAATCTCTTTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	164627784	164634692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164628245_164628617_164628776_164633632
ES.20706.2	chr2	+	1553	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	-7	279	-7	149	multi-exon	FALSE	canonical	3	11	junction_2	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCAATCTCTTTATTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	164627903	164634693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164628245_164628617_164628769_164633632
ES.20706.3	chr2	+	6247	1	Genic_Genomic	ENSMUSG00000050373.14	novel	NA	NA	NA	NA	1251	475	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAAGCCCAGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	164629964	164636211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_164630000_164636200
ES.20707.1	chr2	+	3237	1	Antisense	novelGene_ENSMUSG00000017307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAGGTCAGAGACAAC	NA	False	NA	NA	False	NA	NA	NA	164636265	164639502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164636300_164639500
ES.20708.1	chr2	+	174	1	Intergenic	novelGene_17114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAACAAACGT	NA	False	NA	NA	False	NA	NA	NA	164640378	164640552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164640400_164640600
ES.20709.1	chr2	+	345	1	Intergenic	novelGene_17115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164640573	164640918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164640600_164640900
ES.2071.1	chr1	+	185	1	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAGCAC	440	False	NA	NA	False	NA	NA	NA	180893707	180893892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_180893700_180893900
ES.20710.1	chr2	+	2572	2	Antisense	novelGene_ENSMUSG00000017307.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTGAGGTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	164642566	164645580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164642985_164643426
ES.20710.2	chr2	+	3014	1	Antisense	novelGene_ENSMUSG00000017307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTGAGGTTGTGAAAC	NA	False	NA	NA	False	NA	NA	NA	164642566	164645580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164642600_164645600
ES.20711.1	chr2	+	2707	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	0	1	0	-1	multi-exon	FALSE	canonical	3	86	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGTGTTTTTTGAGAC	3063	False	NA	21	True	AATAAA	-21	NA	164647017	164664049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164647352_164661676
ES.20711.2	chr2	+	2857	3	NNC	ENSMUSG00000045822.5	novel	2708	2	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTTTGTGTTTTTTGAG	3067	False	NA	19	True	AATAAA	-19	NA	164647021	164664047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164647352_164656910_164657067_164661676
ES.20711.3	chr2	+	2519	2	Fusion	ENSMUSG00000045822.5_ENSMUSG00000017764.3	novel	2708	2	NA	NA	4	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTCTTGTCTGGTTT	3067	False	NA	15	True	AATAAA	-18	NA	164647021	164668790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_164647352_164666601
ES.20711.4	chr2	+	2865	3	NNC	ENSMUSG00000045822.5	novel	2708	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCACGTTTGTGTTTTTTG	3067	False	NA	17	True	AATAAA	-17	NA	164647021	164664045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164647352_164656900_164657067_164661676
ES.20711.5	chr2	+	2757	3	NNC	ENSMUSG00000045822.5	novel	2708	2	NA	NA	148	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTTGTGTTTTTTGAGA	3211	False	NA	20	True	AATAAA	-20	NA	164647165	164664048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164647352_164654713_164654913_164661676
ES.20711.6	chr2	+	2470	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	234	1	-93	-1	multi-exon	FALSE	canonical	3	571	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTCTTGTCTGGTTT	8761	False	NA	15	True	AATAAA	-18	NA	164664839	164668790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164665121_164666601
ES.20711.7	chr2	+	3845	1	NIC	ENSMUSG00000017764.3	novel	2705	2	NA	NA	10	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTCGTGTCTTGTCTGG	8864	False	NA	12	True	AATAAA	-15	NA	164664942	164668787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164664900_164668800
ES.20712.1	chr2	-	3032	1	Antisense	novelGene_ENSMUSG00000050373.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTCAGTGGTTAAGA	4239	False	NA	NA	False	TATAAA	-20	NA	164634583	164631551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_164631600_164634600
ES.20712.10	chr2	-	2171	5	NNC	ENSMUSG00000017307.17	novel	1017	5	NA	NA	-16552	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	172.536228079786	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	NA	False	NA	-2	True	AATAAA	-18	NA	164663354	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164636904_164637156_164637571_164637730_164641639_164641866_164662060
ES.20712.11	chr2	-	1147	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	130.832106151357	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTAGCTGACCTTTAAT	8161	False	NA	-5	True	AATAAA	-15	NA	164646807	164634691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645048_164646609
ES.20712.12	chr2	-	3399	3	NIC	ENSMUSG00000017307.17	novel	1017	5	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	55	junction_2	148	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	8219	False	NA	-10	True	AATAAA	-10	NA	164646749	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164637730_164641639_164641866_164646609
ES.20712.13	chr2	-	1328	4	NIC	ENSMUSG00000017307.17	novel	1055	6	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	23	junction_1	147.657260799009	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	8219	False	NA	-10	True	AATAAA	-10	NA	164646749	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164634931_164637001_164637730_164641639_164641866_164646609
ES.20712.14	chr2	-	891	5	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	135.954036350525	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	8223	False	NA	-10	True	AATAAA	-10	NA	164646745	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164634931_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ES.20712.15	chr2	-	992	6	NNC	ENSMUSG00000017307.17	novel	1055	6	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.124419849631	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	8219	False	NA	-10	True	AATAAA	-10	NA	164646749	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164637001_164637156_164637375_164637456_164637571_164637730_164641639_164641866_164646609
ES.20712.16	chr2	-	1126	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	85	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	130.832106151357	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	8311	False	NA	-10	True	AATAAA	-10	NA	164646657	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646481
ES.20712.17	chr2	-	2475	3	FSM	ENSMUSG00000017307.17	ENSMUST00000133053.2	1276	3	-1208	9	-1208	-9	multi-exon	FALSE	canonical	3	311	junction_2	15	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	NA	False	NA	-10	True	AATAAA	-10	NA	164639617	164634696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164634931_164636904_164637100_164637571
ES.20712.18	chr2	-	159	1	Intergenic	novelGene_17116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3148	False	NA	NA	False	NA	NA	NA	164654044	164653885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164653900_164654000
ES.20712.2	chr2	-	5234	3	NIC	ENSMUSG00000017307.17	novel	1017	5	NA	NA	-7	1823	intron_retention	FALSE	canonical	3	55	junction_2	148	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCCTCTTCAATTCT	8219	False	NA	NA	False	NA	NA	NA	164646749	164632861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164637730_164641639_164641866_164646609
ES.20712.3	chr2	-	5532	1	Genic_Genomic	ENSMUSG00000017307.17	novel	NA	NA	NA	NA	15	1822	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGCCTCTTCAATTC	428	False	NA	NA	False	NA	NA	NA	164638394	164632862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164632900_164638400
ES.20712.4	chr2	-	961	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	52	4	-7	-1	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8219	False	NA	-2	True	AATAAA	-18	NA	164646749	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
ES.20712.5	chr2	-	1486	4	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	55	junction_3	137.239450110625	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8166	False	NA	-2	True	AATAAA	-18	NA	164646802	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164634931_164636904_164637730_164641639_164641866_164646609
ES.20712.6	chr2	-	1196	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	-45	1	-45	-1	multi-exon	FALSE	canonical	3	284	junction_4	26.9250812440743	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8121	False	NA	-2	True	AATAAA	-18	NA	164646847	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ES.20712.7	chr2	-	1062	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.31749754667	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8192	False	NA	-2	True	AATAAA	-18	NA	164646776	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164643262_164643337_164646609
ES.20712.9	chr2	-	1082	6	NNC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	128.143045070733	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTGACCTTTAATAGA	8166	False	NA	-2	True	AATAAA	-18	NA	164646802	164634688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164634931_164636904_164637031_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ES.20713.1	chr2	+	570	3	Antisense	novelGene_ENSMUSG00000017767.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAAGTTCCAGGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	164669385	164670561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164669510_164669888_164670079_164670305
ES.20714.1	chr2	+	2061	15	FSM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	36	437	0	-437	multi-exon	FALSE	canonical	0	0	junction_1	269.721332005415	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164674828	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164675117_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.10	chr2	+	2448	11	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-437	intron_retention	FALSE	canonical	3	800	junction_1	88	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675727	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676352_164676617_164676845_164677075_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680870_164681070
ES.20714.11	chr2	+	2742	11	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-437	intron_retention	FALSE	canonical	0	0	junction_9	309.826467558858	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675727	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679334_164680073_164680560
ES.20714.12	chr2	+	1964	16	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	351.818791741178	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675727	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678644_164678793_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.13	chr2	+	2378	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-438	intron_retention	FALSE	canonical	3	800	junction_1	84.9066480841688	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675727	164681501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.14	chr2	+	3500	9	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-439	intron_retention	FALSE	canonical	3	800	junction_1	95.8578863474467	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGGGCTCTTCTCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	164675727	164681500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676352_164676617_164676845_164677075_164677642_164678346_164678998_164679101_164679178_164679276_164680073_164680560_164680870_164681070
ES.20714.15	chr2	+	1809	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	1	-438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	271.399509722385	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675727	164681501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680645_164680764_164680870_164681070
ES.20714.16	chr2	+	1923	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-3	-437	intron_retention	FALSE	canonical	3	800	junction_1	80.685157709186	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675731	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.17	chr2	+	1687	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-3	-441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	272.62244955249	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAACTGGGCTCTTCTCT	NA	False	NA	12	True	ATTAAA	-12	NA	164675731	164681498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679328_164680028_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.18	chr2	+	2382	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	7	-437	intron_retention	FALSE	canonical	3	800	junction_1	78.8557967836895	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675741	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.19	chr2	+	3938	30	Fusion	ENSMUSG00000039849.7_ENSMUSG00000017760.17	novel	3646	16	NA	NA	9	-3077	multi-exon	FALSE	canonical	0	0	junction_14	410.032599266638	845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	NA	False	NA	17	True	AATACA	-15	NA	164675743	164733297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.2	chr2	+	1859	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	865	1449	-41	-436	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675685	164681503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.20	chr2	+	2204	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	11	-438	intron_retention	FALSE	canonical	3	800	junction_1	82.5472928420766	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675745	164681501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.21	chr2	+	1745	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	13	-437	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	279.746144433563	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675747	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.22	chr2	+	1881	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	13	-436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	270.154311534753	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675747	164681503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677465_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.23	chr2	+	3215	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_14	271.695320053135	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTCAGTGTGGTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	164675747	164682952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070_164682567_164682686
ES.20714.24	chr2	+	3091	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	929	153	15	-153	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCGCCTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	164675749	164682799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.25	chr2	+	1866	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-8	-439	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	269.468751738055	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGGGCTCTTCTCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	164675758	164681500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675854_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.26	chr2	+	1962	14	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	968	437	-6	-437	3prime_fragment	FALSE	canonical	3	937	junction_10	54.6384566651142	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675760	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.27	chr2	+	2186	12	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-1	-437	intron_retention	FALSE	canonical	0	0	junction_8	301.616033070125	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675765	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679446_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.28	chr2	+	1735	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-440	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	258.285906443723	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACTGGGCTCTTCTCTG	NA	False	NA	13	True	ATTAAA	-13	NA	164675768	164681499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675913_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.29	chr2	+	2650	10	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-438	intron_retention	FALSE	canonical	3	937	junction_6	63.6448479192673	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGGGCTCTTCTCTGTG	NA	False	NA	15	True	ATTAAA	-15	NA	164675768	164681501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.30	chr2	+	2380	11	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-437	intron_retention	FALSE	canonical	3	937	junction_9	42.3982310951766	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675768	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560
ES.20714.31	chr2	+	1947	14	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-437	intron_retention	FALSE	canonical	1	1	junction_1	278.890256459291	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675768	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675854_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.32	chr2	+	3716	8	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-440	intron_retention	FALSE	canonical	3	982	junction_5	54.7081309481208	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACTGGGCTCTTCTCTG	NA	False	NA	13	True	ATTAAA	-13	NA	164675768	164681499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164680651_164680764_164680870_164681070
ES.20714.33	chr2	+	2044	13	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	2	-436	intron_retention	FALSE	canonical	3	937	junction_9	56.8658264885179	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675768	164681503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.34	chr2	+	1942	14	NNC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	5	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	278.228610612413	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACTGGGCTCTTCTCTG	NA	False	NA	13	True	ATTAAA	-13	NA	164675771	164681499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164676129_164676239_164676352_164676623_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.35	chr2	+	1785	14	NNC	ENSMUSG00000017760.17	novel	2534	15	NA	NA	-3	-437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	278.876465196037	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675946	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680755_164680870_164681070
ES.20714.36	chr2	+	177	1	Intergenic	novelGene_17117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164677972	164678149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164678000_164678100
ES.20714.37	chr2	+	845	5	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	4482	437	173	-437	3prime_fragment	FALSE	canonical	3	937	junction_1	88.6086903187266	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164679274	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.38	chr2	+	175	1	Intergenic	novelGene_17120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATATTAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	164713112	164713287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164713100_164713300
ES.20714.39	chr2	+	174	1	Intergenic	novelGene_17124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4377	False	NA	NA	False	NA	NA	NA	164719704	164719878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164719700_164719900
ES.20714.4	chr2	+	1794	15	NNC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-2	-437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	424.128013020328	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675724	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679287_164679417_164679996_164680065_164680560_164680651_164680770_164680870_164681070
ES.20714.40	chr2	+	1182	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	-604	33	-604	-33	multi-exon	FALSE	canonical	3	441	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTCGTTAACAACCAG	5292	False	NA	11	True	AATAAA	-21	NA	164720619	164725086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694
ES.20714.41	chr2	+	5836	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	-56	0	-3	0	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5893	False	NA	9	True	AATAAA	-16	NA	164721220	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.42	chr2	+	2776	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	6	2998	6	-2998	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACAGGTCCTTTTAGT	5955	False	NA	96	True	NA	NA	NA	164721282	164733376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.43	chr2	+	5740	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	10	-3	intron_retention	FALSE	canonical	2	4	junction_12	78.7812438020624	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGGCCACAGACAT	5959	False	NA	6	True	AATAAA	-13	NA	164721286	164736371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731160_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.44	chr2	+	5377	15	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_11	84.8054195418752	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5959	False	NA	9	True	AATAAA	-16	NA	164721286	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730414_164731586_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.45	chr2	+	5968	19	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_4	97.6912022019092	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5960	False	NA	9	True	AATAAA	-16	NA	164721287	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164726489_164726620_164726997_164727067_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.46	chr2	+	4501	14	NIC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	13	-3081	intron_retention	FALSE	canonical	3	171	junction_3	66.9982778194278	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGTGTGAGGGTCTTG	5962	False	NA	13	True	AATACA	-11	NA	164721289	164733293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164721410_164724694_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164728563_164728643_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.47	chr2	+	678	2	NNC	ENSMUSG00000039849.7	novel	611	2	NA	NA	13	-39	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTATGATGTCGTTAAC	5962	False	NA	5	True	AATAAA	-15	NA	164721289	164725080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721582_164724694
ES.20714.48	chr2	+	2090	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	14	-1650	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAGTCAATTCCA	5963	False	NA	NA	False	NA	NA	NA	164721290	164723380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164721300_164723400
ES.20714.49	chr2	+	2662	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	14	3104	14	-3104	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAATACAGAAACTC	5963	False	NA	-10	True	NA	NA	NA	164721290	164733270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.5	chr2	+	1664	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-2	-436	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	278.902689229006	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTCTTCTCTGTGGC	NA	False	NA	17	True	ATTAAA	-17	NA	164675724	164681503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.50	chr2	+	3792	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	14	-37	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGATGTCGTTAACAA	5963	False	NA	7	True	AATAAA	-17	NA	164721290	164725082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164721300_164725100
ES.20714.52	chr2	+	5864	16	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	18	0	18	0	intron_retention	FALSE	canonical	3	171	junction_4	62.5944264469467	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5967	False	NA	9	True	AATAAA	-16	NA	164721294	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518
ES.20714.53	chr2	+	5934	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	18	0	intron_retention	FALSE	canonical	3	19	junction_1	44.7995535692042	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5967	False	NA	9	True	AATAAA	-16	NA	164721294	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721582_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.54	chr2	+	2856	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	22	-3074	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	44.7995535692042	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGGGTCTTGGGGCGGT	5971	False	NA	20	True	AATACA	-18	NA	164721298	164733300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721582_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.55	chr2	+	5282	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	22	-474	intron_retention	FALSE	canonical	0	0	junction_11	79.4558643210179	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTCTGTCTCGGTTTGTG	5971	False	NA	NA	False	AAGAAA	-21	NA	164721298	164735900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731015_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.56	chr2	+	3118	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	27	2635	27	-2635	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCTGCCTGGTTTCCTG	5976	False	NA	NA	False	NA	NA	NA	164721303	164733739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.57	chr2	+	5164	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_16	79.455962645984	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5976	False	NA	9	True	AATAAA	-16	NA	164721303	164736374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164733385
ES.20714.58	chr2	+	2619	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	28	-3081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	79.455962645984	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGTGTGAGGGTCTTG	5977	False	NA	13	True	AATACA	-11	NA	164721304	164733293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732848
ES.20714.59	chr2	+	3284	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	28	2468	28	-2468	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTCCTGGCTGGAGCC	5977	False	NA	NA	False	AATAAA	-38	NA	164721304	164733906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.6	chr2	+	1907	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	-1	-437	intron_retention	FALSE	canonical	3	800	junction_1	81.5756809102831	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCTCTTCTCTGTGG	NA	False	NA	16	True	ATTAAA	-16	NA	164675725	164681502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20714.60	chr2	+	2821	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	28	-3078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.3346354059814	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGAGGGTCTTGGGG	5977	False	NA	16	True	AATACA	-14	NA	164721304	164733296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721410_164724694_164725012_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.61	chr2	+	3778	15	NIC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	29	-3081	intron_retention	FALSE	canonical	3	182	junction_12	63.1921268668747	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGTGTGAGGGTCTTG	5978	False	NA	13	True	AATACA	-11	NA	164721305	164733293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.62	chr2	+	2792	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	47	-3086	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	62.6238772354443	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAAGAGTGTGTGAGGG	5996	False	NA	8	True	AATACA	-6	NA	164721323	164733288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164721582_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731160_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ES.20714.63	chr2	+	431	2	FSM	ENSMUSG00000039849.7	ENSMUST00000122810.2	383	2	2	-50	2	-39	multi-exon	FALSE	canonical	3	9	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTATGATGTCGTTAAC	6646	False	NA	5	True	AATAAA	-15	NA	164721973	164725080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164722019_164724694
ES.20714.64	chr2	+	2501	14	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	4719	3079	143	-3079	intron_retention	FALSE	canonical	3	171	junction_2	13.246412934123	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTGAGGGTCTTGGG	NA	False	NA	15	True	AATACA	-13	NA	164725995	164733295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518
ES.20714.9	chr2	+	3272	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	906	-5	0	5	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGTGTGGTGGGTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	164675726	164682957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ES.20715.1	chr2	+	5659	4	NNC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	-638	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTTTTTGGATACGGT	6602	False	NA	NA	False	NA	NA	NA	164752635	164761873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164755056_164757149_164758114_164759263_164760287_164760621
ES.20715.2	chr2	+	1664	1	Genic_Genomic	ENSMUSG00000085436.2	novel	NA	NA	NA	NA	-81	-6623	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7159	False	NA	NA	False	NA	NA	NA	164753192	164754856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_164753200_164754900
ES.20715.3	chr2	+	2347	2	FSM	ENSMUSG00000085436.2	ENSMUST00000129364.2	1127	2	86	-1306	86	1306	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCCTTGATGCCCTCT	7326	False	NA	NA	False	AATAAA	-14	NA	164753359	164763179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164753671_164761143
ES.20715.4	chr2	+	963	3	NNC	ENSMUSG00000085436.2	novel	1127	2	NA	NA	293	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTTTTTGGATACGGT	7533	False	NA	NA	False	NA	NA	NA	164753566	164761873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_164753671_164756011_164756141_164761143
ES.20715.5	chr2	+	5111	1	Genic_Genomic	ENSMUSG00000085436.2	novel	NA	NA	NA	NA	754	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTTTGGATACGGTG	NA	False	NA	NA	False	NA	NA	NA	164756763	164761874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_164756800_164761900
ES.20715.6	chr2	+	5333	1	Genic_Genomic	ENSMUSG00000085436.2	novel	NA	NA	NA	NA	1842	1311	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGATGCCCTCTATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	164757851	164763184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_164757900_164763200
ES.20716.1	chr2	-	397	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	614	3	614	-3	multi-exon	FALSE	canonical	3	37	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATTGGAGGGTCTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	164674762	164672654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164672908_164674618
ES.20716.12	chr2	-	1848	15	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	278	junction_14	31.2626301007501	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699563	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164681749_164682033_164682111_164682240_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ES.20716.13	chr2	-	1777	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.7924698632193	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699610	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682041_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ES.20716.14	chr2	-	1564	14	NNC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	102.90588565177	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164698486	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698389
ES.20716.15	chr2	-	2057	18	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-2099	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	121.819027382942	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164701730	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503_164699751_164700423_164700498_164701672
ES.20716.17	chr2	-	2214	18	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-2105	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	142.641467446511	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164701736	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694452_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503_164699751_164700423_164700654_164701672
ES.20716.18	chr2	-	1855	15	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	30	-3	intron_retention	FALSE	canonical	1	4	junction_5	99.7405051488458	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164699601	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686419_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698918_164699503
ES.20716.19	chr2	-	1627	14	NNC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	237	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	102.90588565177	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGGGTTTCTCTAGCT	NA	False	NA	-4	True	NA	NA	NA	164698479	164681440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698319
ES.20716.2	chr2	-	2028	14	Fusion	ENSMUSG00000039873.5_ENSMUSG00000017754.14	novel	754	8	NA	NA	273	-9	intron_retention	FALSE	canonical	0	0	junction_1	157.884498266611	260	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTGAGCATTGGAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	164699189	164672660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_164672908_164678629_164678781_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164694392_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ES.20716.21	chr2	-	2655	14	NIC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	279	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	102.90588565177	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTTGGGTTTCTCTAG	NA	False	NA	-6	True	NA	NA	NA	164698437	164681442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164697247
ES.20716.22	chr2	-	1630	15	NNC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	249	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	133.941675549396	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTTGGGTTTCTCTAG	NA	False	NA	-6	True	NA	NA	NA	164698467	164681442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164697247_164697335_164698389
ES.20716.23	chr2	-	332	1	Intergenic	novelGene_17118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	164683580	164683248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164683200_164683600
ES.20716.24	chr2	-	4107	2	NIC	ENSMUSG00000017754.14	novel	538	5	NA	NA	36	824	intron_retention	FALSE	canonical	3	336	junction_1	0	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAAAAAAAACTTGTA	NA	False	NA	NA	False	NA	NA	NA	164699595	164695405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164698724_164698806
ES.20716.25	chr2	-	2547	2	ISM	ENSMUSG00000017754.14	ENSMUST00000109317.10	1575	15	-58	13979	20	813	intron_retention	FALSE	canonical	3	352	junction_1	0	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	164699611	164695416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164696976_164698623
ES.20716.26	chr2	-	3630	1	NIC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	216	613	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTGGGCGTGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	164699246	164695616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164695600_164699200
ES.20716.27	chr2	-	177	1	Intergenic	novelGene_17119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	164708287	164708110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164708100_164708300
ES.20716.3	chr2	-	3559	16	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-38	1842	intron_retention	FALSE	canonical	2	3	junction_15	95.1360195836583	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCAATCAGCTGGG	NA	False	NA	NA	False	ATTAAA	-13	NA	164699500	164679595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
ES.20716.4	chr2	-	2120	18	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-2165	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	121.194573176665	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164701796	164681437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503_164699751_164700423_164700492_164701672
ES.20716.6	chr2	-	1834	16	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	95.1360195836583	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699617	164681437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
ES.20716.7	chr2	-	2292	18	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-16673	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	121.819027382942	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164716304	164681437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503_164699751_164700423_164700654_164716170
ES.20716.8	chr2	-	1759	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	149.368983839796	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699561	164681437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682429_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688833_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
ES.20716.9	chr2	-	1801	16	NNC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	91.9865690679291	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGGTTTCTCTAGCTC	NA	False	NA	-3	True	NA	NA	NA	164699559	164681439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699437
ES.20717.1	chr2	-	2965	3	Intergenic	novelGene_17121	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGCTCAGGTCCCATGCA	NA	False	NA	NA	False	AATAAA	-25	NA	164721033	164716771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164717788_164718878_164719696_164719901
ES.20717.2	chr2	-	3619	3	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCCGTACTCGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	164721699	164716783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_164717781_164718871_164719696_164719901
ES.20717.3	chr2	-	320	1	Intergenic	novelGene_17122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAAAGACCAGGCCTG	NA	False	NA	NA	False	CATAAA	-31	NA	164717885	164717565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164717600_164717900
ES.20717.4	chr2	-	214	1	Intergenic	novelGene_17123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCAATTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	164717884	164717670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164717700_164717900
ES.20717.5	chr2	-	1718	1	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTTTAAAAGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	164721705	164719987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_164720000_164721700
ES.20717.6	chr2	-	1466	1	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGGAGACTGATAAA	NA	False	NA	NA	False	NA	NA	NA	164721663	164720197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_164720200_164721700
ES.20718.1	chr2	-	200	1	Intergenic	novelGene_17125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGACTCTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	164724343	164724143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164724100_164724300
ES.20719.1	chr2	-	6381	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	-1678	4226	intron_retention	TRUE	non_canonical	0	0	junction_15	36.7328953391915	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTACTGTCATTCAT	NA	False	NA	NA	False	NA	NA	NA	164751263	164729575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164730485_164732324_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741788_164741952_164742030_164742108_164742197_164742315_164743320_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125
ES.20719.11	chr2	-	4291	28	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	194	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.8184579468894	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753483	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741243_164741338_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164743324_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.12	chr2	-	5324	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	164	0	intron_retention	FALSE	canonical	3	15	junction_26	25.0906345242284	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753513	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752796_164753436
ES.20719.14	chr2	-	3809	21	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	218	0	intron_retention	FALSE	canonical	3	65	junction_13	18.44613780714	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164749367	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347
ES.20719.15	chr2	-	6506	24	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	175	0	intron_retention	FALSE	canonical	3	65	junction_12	19.3356581180529	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753502	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.17	chr2	-	4426	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	27.0764860104585	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753518	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164743320_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.19	chr2	-	4557	26	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	185	-1	intron_retention	FALSE	canonical	3	65	junction_12	18.834606446645	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTTGTATATGTGCT	NA	False	NA	-1	True	AATAAA	-24	NA	164753492	164733802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.2	chr2	-	6604	28	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	168	4222	intron_retention	FALSE	canonical	0	0	junction_1	25.517416521924	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTTTACTGTCAT	NA	False	NA	NA	False	NA	NA	NA	164753509	164729579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164730485_164732601_164734212_164734299_164734382_164734460_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.20	chr2	-	4608	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	159	-2	intron_retention	FALSE	canonical	1	1	junction_17	27.4055760749523	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753518	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743333_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.21	chr2	-	4510	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	153	-2	intron_retention	FALSE	canonical	3	65	junction_13	19.3627776871841	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753524	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.23	chr2	-	4894	25	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	603	-2	intron_retention	FALSE	canonical	0	0	junction_11	33.688421189219	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753074	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738009_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164750153_164750972_164751364_164752541
ES.20719.24	chr2	-	4472	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	192	-2	intron_retention	FALSE	canonical	3	65	junction_13	18.9792786414942	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753485	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.25	chr2	-	4575	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	170	-2	intron_retention	FALSE	canonical	3	15	junction_25	25.1210190876087	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753507	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752796_164753436
ES.20719.26	chr2	-	4443	28	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	160	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.928937103192	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753517	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734216_164734299_164734382_164734460_164734541_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.27	chr2	-	4474	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	192	-2	intron_retention	FALSE	canonical	3	12	junction_22	24.6330765747696	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	False	NA	-2	True	AATAAA	-23	NA	164753485	164733803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749498_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.28	chr2	-	4548	25	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	837	-4	intron_retention	FALSE	canonical	3	65	junction_12	18.6813558275505	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTCTTTGTATATGT	NA	False	NA	-4	True	AATAAA	-21	NA	164752840	164733805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541
ES.20719.3	chr2	-	4225	1	Genic_Genomic	ENSMUSG00000039834.18	novel	NA	NA	NA	NA	15781	4222	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTTTACTGTCAT	9392	False	NA	NA	False	NA	NA	NA	164733804	164729579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164729600_164733800
ES.20719.30	chr2	-	5506	23	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	749	-6	intron_retention	FALSE	canonical	3	65	junction_13	19.2847303959967	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTCTCTTTGTATAT	NA	False	NA	-6	True	AATAAA	-19	NA	164752928	164733807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164744306_164744415_164744657_164746760_164746908_164749347_164750153_164751125_164751364_164752541
ES.20719.31	chr2	-	4299	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	845	-6	intron_retention	FALSE	canonical	0	0	junction_11	27.4707116762562	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTCTCTTTGTATAT	NA	False	NA	-6	True	AATAAA	-19	NA	164752832	164733807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738009_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541
ES.20719.32	chr2	-	4554	26	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	186	-6	intron_retention	FALSE	canonical	3	65	junction_12	18.0941537519719	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTCTCTTTGTATAT	NA	False	NA	-6	True	AATAAA	-19	NA	164753491	164733807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.36	chr2	-	4620	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	-58	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	27.0764860104585	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753735	164733811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164743333_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.37	chr2	-	7108	25	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	186	-10	intron_retention	FALSE	canonical	3	65	junction_10	18.9028492120456	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753491	164733811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.38	chr2	-	4757	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	523	-10	intron_retention	FALSE	canonical	1	5	junction_2	26.4132088168022	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGCAACTCTCTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	164753154	164733811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734486_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541
ES.20719.4	chr2	-	6582	29	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	165	4221	intron_retention	TRUE	canonical	1	2	junction_26	36.5283472533487	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGTGTTTACTGTCA	NA	False	NA	NA	False	NA	NA	NA	164753512	164729580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164730485_164732324_164732445_164732601_164734212_164734299_164734382_164734460_164734541_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164751125_164751364_164752541_164752793_164753436
ES.20719.40	chr2	-	4370	28	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	160	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	26.5604882034891	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753517	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744173_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.41	chr2	-	4526	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	398	-11	intron_retention	FALSE	canonical	0	0	junction_26	26.2172590969425	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753279	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753166
ES.20719.42	chr2	-	3933	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	-1600	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.1716182151582	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164751185	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734554_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125
ES.20719.43	chr2	-	3384	23	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	190	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	28.6112443942084	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164749395	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740025_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347
ES.20719.44	chr2	-	4462	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	194	-11	intron_retention	FALSE	canonical	3	65	junction_12	18.2839212191458	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753483	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.45	chr2	-	3646	20	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	145	-11	intron_retention	FALSE	canonical	3	65	junction_11	18.9666568488535	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164749440	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347
ES.20719.46	chr2	-	4310	29	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	170	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	25.9786755172902	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753507	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741243_164741338_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.47	chr2	-	4595	24	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	776	-11	intron_retention	FALSE	canonical	0	0	junction_16	28.2992381683213	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164752901	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164743324_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541
ES.20719.48	chr2	-	4445	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	207	-11	intron_retention	FALSE	canonical	0	0	junction_16	26.7639757883615	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753470	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164743320_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.5	chr2	-	8628	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	160	4220	intron_retention	FALSE	canonical	0	0	junction_22	31.3922737639535	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGAGTGTTTACTGTC	NA	False	NA	NA	False	NA	NA	NA	164753517	164729581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164730485_164732324_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749570_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.50	chr2	-	4895	26	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	521	-11	intron_retention	FALSE	canonical	3	65	junction_13	19.2333044482741	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753156	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164750153_164751125_164751364_164752541
ES.20719.51	chr2	-	4780	23	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	220	-11	intron_retention	FALSE	canonical	3	65	junction_9	17.6916308364405	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753457	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740198_164741176_164741407_164741790_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.52	chr2	-	5069	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	184	-11	intron_retention	FALSE	canonical	3	65	junction_13	19.4566731528675	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753493	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.53	chr2	-	4507	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	161	-11	intron_retention	FALSE	canonical	3	8	junction_3	24.8699576376681	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	NA	False	NA	-11	True	AATAAA	-14	NA	164753516	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734541_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.54	chr2	-	2888	20	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	5313	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.6432424891575	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGCAACTCTCTTTG	1656	False	NA	-11	True	AATAAA	-14	NA	164744272	164733812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736450_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127
ES.20719.55	chr2	-	5578	26	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	-27	-12	intron_retention	FALSE	canonical	3	65	junction_12	19.0000421052165	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTTGCAACTCTCTTT	NA	False	NA	-12	True	AATAAA	-13	NA	164753704	164733813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.7	chr2	-	4499	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	160	1	intron_retention	FALSE	canonical	0	0	junction_22	25.9477171186338	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTATATGTGCTAA	NA	False	NA	1	True	AATAAA	-26	NA	164753517	164733800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749486_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.8	chr2	-	4504	26	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	159	0	intron_retention	FALSE	canonical	0	0	junction_17	27.5418517895947	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753518	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164743320_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.20719.9	chr2	-	4659	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	-72	0	-72	0	multi-exon	FALSE	canonical	3	65	junction_13	19.1818958999235	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753749	164733801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ES.2072.1	chr1	+	3879	2	Antisense	novelGene_ENSMUSG00000026516.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180924289	180930493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_180926769_180929093
ES.2072.2	chr1	+	6225	1	Antisense	novelGene_ENSMUSG00000026516.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGCAGAAAATTATTACA	NA	False	NA	NA	False	NA	NA	NA	180924289	180930514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_180924300_180930500
ES.20720.1	chr2	-	165	1	Intergenic	novelGene_17126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCTTCCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	164759180	164759015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164759000_164759200
ES.20721.1	chr2	+	170	1	Intergenic	novelGene_17127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	164801807	164801977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164801800_164802000
ES.20722.1	chr2	+	5688	25	FSM	ENSMUSG00000017740.18	ENSMUST00000202223.4	5690	25	7	-5	7	0	multi-exon	FALSE	canonical	0	0	junction_10	1.58058972819922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCTGAAGGGTACGGT	NA	False	NA	NA	False	AATAAA	-21	NA	164802772	164841647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164802924_164815606_164815702_164816367_164816500_164816826_164816974_164817803_164817859_164818352_164818484_164821198_164821441_164822074_164822287_164824731_164824903_164825125_164825225_164825423_164825482_164828524_164828700_164829030_164829150_164829453_164829553_164830449_164830570_164830921_164831027_164832163_164832333_164834230_164834427_164835559_164835730_164835899_164836032_164836849_164836958_164838026_164838150_164838241_164838439_164839029_164839164_164839299
ES.20722.2	chr2	+	2993	5	ISM	ENSMUSG00000017740.18	ENSMUST00000202223.4	5690	25	34005	-9	-1740	0	3prime_fragment	FALSE	canonical	2	2	junction_2	1.58113883008419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAAGGGTACGGTTTAG	336	False	NA	NA	False	AATAAA	-25	NA	164836770	164841651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164836958_164838026_164838150_164838241_164838439_164839029_164839164_164839299
ES.20723.1	chr2	+	173	1	Intergenic	novelGene_17128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTTTGCCA	51	False	NA	NA	False	NA	NA	NA	164857837	164858010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_164857800_164858000
ES.20724.1	chr2	-	6291	5	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	0	10	intron_retention	FALSE	canonical	2	6	junction_4	43.7228487178043	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTGGGTGTGTCTGC	3062	False	NA	4	True	ATTAAA	-25	NA	164876707	164842266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164855083_164876602
ES.20724.10	chr2	-	4115	7	NIC	ENSMUSG00000039804.16	novel	3117	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_1	38.1943131310874	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	3067	False	NA	-9	True	ATTAAA	-12	NA	164876702	164842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.11	chr2	-	3089	8	NIC	ENSMUSG00000039804.16	novel	3117	8	NA	NA	5	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	47.9774606945165	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAAGTCAGACCT	3067	False	NA	-23	True	GATAAA	-23	NA	164876702	164842293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865122_164876602
ES.20724.12	chr2	-	2075	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	61	1043	-3	-1037	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGGGCTGGATCTTTTG	3043	False	NA	NA	False	NA	NA	NA	164876726	164843319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.13	chr2	-	2068	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	12	1037	11	-1037	multi-exon	FALSE	canonical	3	14	junction_1	35.3784207259344	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGGGCTGGATCTTTTG	3073	False	NA	NA	False	NA	NA	NA	164876696	164843319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.14	chr2	-	2986	6	NIC	ENSMUSG00000039804.16	novel	3117	8	NA	NA	-6	-1086	intron_retention	FALSE	canonical	2	6	junction_5	54.2785408794304	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCGGCTGTTGCTTA	3040	False	NA	NA	False	NA	NA	NA	164876729	164843368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164852508_164854755_164855083_164876602
ES.20724.15	chr2	-	5831	1	Genic_Genomic	ENSMUSG00000039804.16	novel	NA	NA	NA	NA	389	-3997	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTTTAGAAGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	164864744	164858913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_164858900_164864700
ES.20724.16	chr2	-	457	3	NNC	ENSMUSG00000039804.16	novel	376	2	NA	NA	-4	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTCAAAAGTCTTCCTT	3028	False	NA	NA	False	AATAAA	-17	NA	164876741	164864539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164864791_164865065_164865133_164876602
ES.20724.2	chr2	-	4182	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	3	5	intron_retention	TRUE	canonical	3	73	junction_1	20.1246117974981	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATCTTTCTTGGGTGTG	2985	False	NA	-1	True	ATTAAA	-20	NA	164876784	164842271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.3	chr2	-	3206	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	-79	-10	0	4	multi-exon	FALSE	canonical	3	14	junction_1	35.3784207259344	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATCTTTCTTGGGTGT	2982	False	NA	-2	True	ATTAAA	-19	NA	164876787	164842272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.4	chr2	-	3171	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	12	-4	12	4	multi-exon	FALSE	canonical	3	73	junction_1	19.1790702249582	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATCTTTCTTGGGTGT	2994	False	NA	-2	True	ATTAAA	-19	NA	164876775	164842272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.5	chr2	-	4093	6	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	-18	0	intron_retention	FALSE	canonical	2	6	junction_5	45.2176956511497	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	3002	False	NA	-6	True	ATTAAA	-15	NA	164876767	164842276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164852508_164854755_164855083_164876602
ES.20724.6	chr2	-	3050	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.2812171439856	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCTAATCTTTCTTG	3043	False	NA	-7	True	ATTAAA	-14	NA	164876726	164842277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164876602
ES.20724.7	chr2	-	3625	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	18	0	intron_retention	FALSE	canonical	3	83	junction_6	16.9082491372965	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	3000	False	NA	-9	True	ATTAAA	-12	NA	164876769	164842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ES.20724.8	chr2	-	4244	3	NIC	ENSMUSG00000039804.16	novel	2930	6	NA	NA	-5433	0	intron_retention	FALSE	canonical	3	73	junction_1	20	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	7794	False	NA	-9	True	ATTAAA	-12	NA	164852016	164842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164844092_164844558_164846217_164851242
ES.20724.9	chr2	-	4097	6	ISM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	20532	3	8878	0	3prime_fragment	FALSE	canonical	3	73	junction_1	20.9227149289952	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	3555	False	NA	-9	True	ATTAAA	-12	NA	164856255	164842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755
ES.20725.1	chr2	+	1435	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	16	1535	7	-241	multi-exon	FALSE	canonical	3	6	junction_1	6.06217782649107	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTTGATCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	164897562	164913333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
ES.20725.3	chr2	+	3935	3	ISM	ENSMUSG00000017652.17	ENSMUST00000081310.11	668	8	10684	-527	3688	272	3prime_fragment	FALSE	canonical	3	6	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGACATCTCAGAAACT	NA	False	NA	NA	False	NA	NA	NA	164908283	164913192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_164911636_164911736_164911769_164912641
ES.20726.1	chr2	-	182	1	Intergenic	novelGene_17129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAGAAAACACT	NA	False	NA	NA	False	NA	NA	NA	164946838	164946656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_164946700_164946800
ES.20727.1	chr2	+	1996	6	Antisense	novelGene_ENSMUSG00000053166.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.4	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCCTCGGCACGGTG	NA	False	NA	NA	False	NA	NA	NA	164983303	164993709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_164983425_164985648_164985777_164985993_164986037_164989038_164989131_164990965_164991163_164992294
ES.20728.10	chr2	-	4760	7	NNC	ENSMUSG00000053166.15	novel	3702	12	NA	NA	520	-25851	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.3870669054836	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCCCAGCATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	165022859	164980097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164981103_164981268_164984228_164985561_164985756_164988524_164988693_164999169_164999273_165012542_165012838_165022823
ES.20728.11	chr2	-	820	1	Intergenic	novelGene_17130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	165069623	165068803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165068800_165069600
ES.20728.4	chr2	-	3069	11	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	53724	4	330	-4	3prime_fragment	TRUE	canonical	0	0	junction_10	8.62554346113913	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCGTTATCCTTGTGGT	NA	False	NA	-9	True	NA	NA	NA	165023049	164953430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561_164985756_164988524_164988693_164999169_164999290_165012542_165012838_165022823
ES.20728.6	chr2	-	2101	6	NNC	ENSMUSG00000053166.15	novel	3702	12	NA	NA	39157	-1875	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.93084542470644	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATGAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	164984222	164956121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164957407_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164984035
ES.20728.7	chr2	-	2358	7	NNC	ENSMUSG00000053166.15	novel	3702	12	NA	NA	37628	-1875	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.4535599249993	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATGAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	164985751	164956121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_164957407_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
ES.20728.8	chr2	-	2819	6	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	90983	2926	37589	-2106	internal_fragment	FALSE	canonical	2	10	junction_4	5.30659966456864	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGTTTGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	164985790	164956352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
ES.20728.9	chr2	-	4181	11	NIC	ENSMUSG00000053166.15	novel	2521	11	NA	NA	-25	-2110	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.44748483277715	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTTGTTTGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	165076798	164956356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164984035_164984228_164985561_164985756_164988524_164988693_164999169_164999290_165012542_165012838_165022823_165023380_165076474
ES.20729.10	chr2	-	4492	9	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	1581	1	378	-1	3prime_fragment	FALSE	canonical	3	229	junction_4	16.0657827384787	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	7355	False	NA	-35	True	AATAAA	-17	NA	165128094	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168
ES.20729.11	chr2	-	1673	10	NNC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	77.8937231024775	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	9927	False	NA	-35	True	AATAAA	-17	NA	165125522	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125201_165125447
ES.20729.12	chr2	-	1771	9	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	22	-1	intron_retention	FALSE	canonical	1	1	junction_4	92.7293609112022	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5727	False	NA	-35	True	AATAAA	-17	NA	165129722	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ES.20729.13	chr2	-	5275	6	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	22	-1	intron_retention	FALSE	canonical	3	63	junction_5	81.7713886393034	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5727	False	NA	-35	True	AATAAA	-17	NA	165129722	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165124065_165124702_165124854_165125168_165125521_165129703
ES.20729.14	chr2	-	1871	10	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	23	-1	intron_retention	FALSE	canonical	0	0	junction_9	81.2874794847746	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5728	False	NA	-35	True	AATAAA	-17	NA	165129721	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125456_165129703
ES.20729.15	chr2	-	1832	9	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	0	-1	intron_retention	FALSE	canonical	1	9	junction_1	89.6192466772624	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5705	False	NA	-35	True	AATAAA	-17	NA	165129744	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ES.20729.16	chr2	-	2619	8	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	3769	1	-386	-1	intron_retention	FALSE	canonical	3	229	junction_4	14.9611742418126	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	9543	False	NA	-35	True	AATAAA	-17	NA	165125906	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702
ES.20729.17	chr2	-	3611	6	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	229	junction_4	15.2787434038274	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	9927	False	NA	-35	True	AATAAA	-17	NA	165125522	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165124854_165125168
ES.20729.18	chr2	-	3148	5	NNC	ENSMUSG00000017664.17	novel	1926	10	NA	NA	467	-1	intron_retention	FALSE	canonical	2	9	junction_3	102.54602625163	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	NA	False	NA	-35	True	AATAAA	-17	NA	165123676	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165121468_165122621_165122705
ES.20729.19	chr2	-	3350	7	NNC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	3	junction_4	112.746027276648	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	9927	False	NA	-35	True	AATAAA	-17	NA	165125522	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165121468_165121593_165122536_165122621_165122705_165123301_165124000
ES.20729.2	chr2	-	2027	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	-3	-16	-3	16	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGCCTCAGCCCAGAT	5657	False	NA	-18	True	AATAAA	-34	NA	165129792	165118457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ES.20729.20	chr2	-	2646	9	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	16	-1	intron_retention	FALSE	canonical	3	110	junction_8	50.6086393316398	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCTCTGGAGACTACC	5721	False	NA	-35	True	AATAAA	-17	NA	165129728	165118474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165124065_165124702_165124854_165125168_165125524_165129703
ES.20729.21	chr2	-	1898	10	NNC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	13	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	81.2874794847746	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTCTGGAGACTAC	5718	False	NA	-36	True	AATAAA	-16	NA	165129731	165118475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125474_165129703
ES.20729.22	chr2	-	1989	10	NNC	ENSMUSG00000017664.17	novel	1991	10	NA	NA	201	-2	intron_retention	FALSE	canonical	0	0	junction_9	81.2874794847746	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTCTGGAGACTAC	5975	False	NA	-36	True	AATAAA	-16	NA	165129474	165118475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129402
ES.20729.23	chr2	-	2002	10	NIC	ENSMUSG00000017664.17	novel	1991	10	NA	NA	7	-2	intron_retention	FALSE	canonical	2	5	junction_9	79.7441897724789	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTCTGGAGACTAC	5764	False	NA	-36	True	AATAAA	-16	NA	165129685	165118475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129603
ES.20729.25	chr2	-	2586	9	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	13	-2	intron_retention	FALSE	canonical	3	110	junction_8	48.0357939457651	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGCCTCTGGAGACTAC	5718	False	NA	-36	True	AATAAA	-16	NA	165129731	165118475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124854_165125168_165125524_165129703
ES.20729.26	chr2	-	2056	10	NNC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	11	-4	intron_retention	FALSE	canonical	2	3	junction_6	87.7610391916595	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	5716	False	NA	-38	True	AATAAA	-14	NA	165129733	165118477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123409_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ES.20729.27	chr2	-	2126	11	NNC	ENSMUSG00000017664.17	novel	1991	10	NA	NA	2	-4	intron_retention	FALSE	canonical	2	3	junction_4	114.676763121393	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	5759	False	NA	-38	True	AATAAA	-14	NA	165129690	165118477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165121468_165121593_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
ES.20729.28	chr2	-	2873	7	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4150	4	-5	-4	intron_retention	FALSE	canonical	3	229	junction_4	9.3704618645804	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	9924	False	NA	-38	True	AATAAA	-14	NA	165125525	165118477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000
ES.20729.3	chr2	-	1873	11	NIC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	0	16	combination_of_known_junctions	TRUE	canonical	3	13	junction_9	81.3242891146304	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGCCTCAGCCCAGAT	5691	False	NA	-18	True	AATAAA	-34	NA	165129758	165118457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125524_165129703
ES.20729.4	chr2	-	3384	4	NIC	ENSMUSG00000017664.17	novel	1926	10	NA	NA	1372	8	intron_retention	FALSE	canonical	3	229	junction_3	11.6714276000077	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACTACCAGTGCCTCA	NA	False	NA	-26	True	AATAAA	-26	NA	165122771	165118465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165122621_165122705
ES.20729.5	chr2	-	1956	12	NNC	ENSMUSG00000017664.17	novel	1843	11	NA	NA	17	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	110.83812931068	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGACTACCAGTGCCT	5722	False	NA	-28	True	AATAAA	-24	NA	165129727	165118467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165121468_165121593_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125524_165129703
ES.20729.6	chr2	-	2980	7	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	-2	6	intron_retention	FALSE	canonical	3	229	junction_4	18.0161964169281	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGACTACCAGTGCCT	9927	False	NA	-28	True	AATAAA	-24	NA	165125522	165118467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165124065_165124702_165124854_165125168
ES.20729.7	chr2	-	1978	10	NNC	ENSMUSG00000017664.17	novel	1892	10	NA	NA	0	5	intron_retention	FALSE	non_canonical	0	0	junction_8	86.5783025309217	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGACTACCAGTGCC	5705	False	NA	-29	True	AATAAA	-23	NA	165129744	165118468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124864_165125168_165125524_165129703
ES.20729.8	chr2	-	1856	8	NIC	ENSMUSG00000017664.17	novel	2008	10	NA	NA	-5	5	intron_retention	FALSE	canonical	0	0	junction_5	90.9489652811635	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGACTACCAGTGCC	9924	False	NA	-29	True	AATAAA	-23	NA	165125525	165118468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165124000_165124065_165124702_165124854_165125168
ES.20729.9	chr2	-	6794	3	NIC	ENSMUSG00000017664.17	novel	690	5	NA	NA	-1	3	intron_retention	FALSE	canonical	3	110	junction_2	82.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGGAGACTACCAGTG	5690	False	NA	-31	True	AATAAA	-21	NA	165129759	165118470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165124854_165125168_165125524_165129703
ES.2073.1	chr1	+	3736	4	FSM	ENSMUSG00000062169.14	ENSMUST00000193907.6	531	4	-461	-2744	-461	-2	multi-exon	FALSE	canonical	3	16	junction_1	993.032504782978	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTTCTATTGCT	NA	False	NA	NA	False	NA	NA	NA	180971796	180996557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180972467_180983423_180983537_180989639_180989781_180993745
ES.2073.10	chr1	+	605	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1059.51616316128	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATTGAGTTT	NA	False	NA	-4	True	CATAAA	-7	NA	180978535	180993939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180979019_180979086_180983423_180983537_180989639_180989781_180993745
ES.2073.11	chr1	+	3085	4	FSM	ENSMUSG00000062169.14	ENSMUST00000111059.2	3127	4	40	2	40	-2	multi-exon	FALSE	canonical	3	142	junction_3	804.702429473156	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTTCTATTGCT	NA	False	NA	NA	False	NA	NA	NA	180978535	180996557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180993745
ES.2073.12	chr1	+	8687	1	NIC	ENSMUSG00000062169.14	novel	531	4	NA	NA	40	-6591	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACAGTAGATACGGGA	NA	False	NA	NA	False	NA	NA	NA	180978535	180987222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180978500_180987200
ES.2073.13	chr1	+	3211	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	42	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	1057.26330093312	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAATTAATCTGATT	NA	False	NA	NA	False	NA	NA	NA	180978537	180996546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180979027_180979095_180983423_180983537_180989639_180989781_180993745
ES.2073.14	chr1	+	2539	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	42	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	884.402905920147	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTTTGTAGATTTCT	NA	False	NA	8	True	AATAAA	-1	NA	180978537	180993951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981299_180983290_180983423_180983537_180989639_180989781_180993745
ES.2073.15	chr1	+	3228	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	43	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	845.613830303171	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAATTAATCTGATT	NA	False	NA	NA	False	NA	NA	NA	180978538	180996546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993729
ES.2073.16	chr1	+	599	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	44	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	887.221787379007	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATTGAGTTT	NA	False	NA	-4	True	CATAAA	-7	NA	180978539	180993939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981304_180981369_180983423_180983537_180989639_180989781_180993745
ES.2073.17	chr1	+	909	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	46	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1060.26420645988	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTCCAGCAAATGAAGG	NA	False	NA	34	True	AATAAA	-27	NA	180978541	180993977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180982282_180982621_180983423_180983537_180989639_180989781_180993745
ES.2073.18	chr1	+	1631	4	FSM	ENSMUSG00000062169.14	ENSMUST00000111059.2	3127	4	47	1449	47	1164	multi-exon	FALSE	canonical	3	142	junction_3	804.702429473156	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTCTCTGTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	180978542	180995110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180993745
ES.2073.19	chr1	+	5360	3	FSM	ENSMUSG00000062169.14	ENSMUST00000111057.2	562	3	-4742	-56	47	24	multi-exon	FALSE	canonical	3	2115	junction_1	7.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTGAACTCCAGCAA	NA	False	NA	27	True	AATAAA	-20	NA	180978542	180993970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180983537_180989639_180989781_180993745
ES.2073.2	chr1	+	2213	6	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	112	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	803.685162237054	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAAGGTGTTTTGTCTC	NA	False	NA	45	True	AATAAA	-38	NA	180972369	180993988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180972467_180977076_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ES.2073.20	chr1	+	591	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	1057.26330093312	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATTGAGTTT	NA	False	NA	-4	True	CATAAA	-7	NA	180978550	180993939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180979027_180979095_180983423_180983537_180989639_180989781_180993745
ES.2073.21	chr1	+	1757	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	59	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	846.043253917907	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAATTAATCTGATT	NA	False	NA	NA	False	NA	NA	NA	180978554	180996546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180995184
ES.2073.22	chr1	+	312	3	NNC	ENSMUSG00000062169.14	novel	562	3	NA	NA	199	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1057.5	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTGAACTCCAGCAA	NA	False	NA	27	True	AATAAA	-20	NA	180983483	180993970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180983537_180989639_180989729_180993800
ES.2073.3	chr1	+	3298	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	-29	-1	-29	1	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTCTATTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	180978466	180996560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ES.2073.4	chr1	+	4953	4	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	34	5	intron_retention	FALSE	canonical	2	8	junction_1	996.803669513488	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTTTGTAGATTTCT	NA	False	NA	8	True	AATAAA	-1	NA	180978529	180993951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180979027_180983537_180989639_180989781_180993745
ES.2073.5	chr1	+	7196	4	ISM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	35	2	35	-2	intron_retention	FALSE	canonical	3	1843	junction_1	125.489264702426	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTTCTATTGCT	NA	False	NA	NA	False	NA	NA	NA	180978530	180996557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639
ES.2073.6	chr1	+	471	4	FSM	ENSMUSG00000062169.14	ENSMUST00000111059.2	3127	4	36	2620	36	-7	multi-exon	FALSE	canonical	3	142	junction_3	804.702429473156	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATTGAGTTT	NA	False	NA	-4	True	CATAAA	-7	NA	180978531	180993939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180993745
ES.2073.7	chr1	+	3328	4	NIC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	39	39	intron_retention	FALSE	canonical	3	1855	junction_1	126.249312429371	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATGAAGGTGTTTTGT	NA	False	NA	42	True	AATAAA	-35	NA	180978534	180993985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_180981369_180983423_180983537_180989639_180989781_180993745
ES.2073.8	chr1	+	3213	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	887.221787379007	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTGATTGTTCTATTG	NA	False	NA	NA	False	NA	NA	NA	180978534	180996555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981311_180981369_180983423_180983537_180989639_180989781_180993745
ES.2073.9	chr1	+	586	5	NNC	ENSMUSG00000062169.14	novel	3268	5	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	884.643572293384	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATTGAGTTT	NA	False	NA	-4	True	CATAAA	-7	NA	180978535	180993939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_180978627_180981321_180981369_180983423_180983537_180989639_180989781_180993745
ES.20730.1	chr2	-	4587	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	2	-1123	2	-1	multi-exon	TRUE	canonical	3	269	junction_20	30.5759300757965	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGCTGCTTGAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	165168397	165129951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.10	chr2	-	3471	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-1	10	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	75.0502997995344	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACACCTCTTCCTCTG	NA	False	NA	-7	True	AATAAA	-25	NA	165168400	165131064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.11	chr2	-	2906	16	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	86.1699612522962	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATCCACACCTCTTCC	NA	False	NA	-11	True	AATAAA	-21	NA	165168397	165131068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.12	chr2	-	3686	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	22	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.2635397814709	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATCCACACCTCTTCC	NA	False	NA	-11	True	AATAAA	-21	NA	165168377	165131068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165147135_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.13	chr2	-	3479	22	NIC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	114.633538166465	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTCCTATCCACACCT	NA	False	NA	-16	True	AATAAA	-16	NA	165168387	165131073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.14	chr2	-	8308	20	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	0	intron_retention	TRUE	non_canonical	0	0	junction_2	78.2378290517883	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168387	165131074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134590_165134701_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.15	chr2	-	4193	21	NIC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_11	100.382007850013	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168400	165131074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.18	chr2	-	4687	21	NIC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	13	0	intron_retention	FALSE	canonical	2	2	junction_12	75.8679115305015	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168386	165131074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.19	chr2	-	6373	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	269	junction_19	30.9689326946178	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168399	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.2	chr2	-	4593	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	27	-1118	27	-6	multi-exon	FALSE	canonical	1	2	junction_12	97.9880829442692	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTCCCTGCTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	165168372	165129956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.21	chr2	-	3716	20	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	76.7004100939966	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168397	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157891_165158158_165158272_165168337
ES.20730.23	chr2	-	3458	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	76.245983500772	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168394	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140258_165140535_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.24	chr2	-	3436	20	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	101.917706197525	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168387	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140258_165140535_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165158132_165158272_165168337
ES.20730.26	chr2	-	3797	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	269	junction_19	29.9425118622419	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168410	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157959_165158158_165158272_165168337
ES.20730.27	chr2	-	3487	22	NNC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	115.919512306312	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168387	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140258_165140535_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.28	chr2	-	4379	18	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	14	-1	intron_retention	FALSE	canonical	1	1	junction_3	82.4522930113976	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168385	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136929_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.3	chr2	-	3504	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	-20	-18	-20	18	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCTCTGCACTTATT	NA	False	NA	1	True	AATAAA	-33	NA	165168419	165131056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.30	chr2	-	4116	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	39	-1	intron_retention	FALSE	canonical	3	269	junction_19	31.0413003411553	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168360	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.33	chr2	-	4698	21	NNC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	21	-1	intron_retention	FALSE	canonical	1	1	junction_3	117.483871233459	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168378	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136929_165137042_165137163_165137277_165137382_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.34	chr2	-	6496	20	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_9	78.230464271703	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168386	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139702_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.38	chr2	-	3548	22	NNC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.8278468381134	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168385	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146039_165146137_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.4	chr2	-	5418	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	76.2680142654835	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTCCTCTGCACTTAT	NA	False	NA	0	True	AATAAA	-32	NA	165168387	165131057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134583_165134693_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.40	chr2	-	3583	22	NIC	ENSMUSG00000017670.17	novel	3502	22	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	98.7197182250836	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168386	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165167786_165167918_165168337
ES.20730.41	chr2	-	3579	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	76.2635397814709	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTTCCTATCCACAC	NA	False	NA	-18	True	AATAAA	-14	NA	165168377	165131075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139702_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.44	chr2	-	3658	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.9100095085573	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168368	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134100_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157689_165157959_165158158_165158272_165168337
ES.20730.45	chr2	-	3414	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	77.6315967885796	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168400	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.50	chr2	-	5472	19	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	30	-2	intron_retention	FALSE	canonical	3	269	junction_18	31.8046215292257	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168369	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.51	chr2	-	3425	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.2680142654835	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168384	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143888_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.53	chr2	-	3454	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.0819295233763	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168385	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137038_165137155_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.54	chr2	-	3535	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	99.50340446437	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168385	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150834_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157436_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.55	chr2	-	3482	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	74.9889825241015	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGCTTCCTATCCACA	NA	False	NA	-19	True	AATAAA	-13	NA	165168387	165131076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153755_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.56	chr2	-	3772	2	NNC	ENSMUSG00000017670.17	novel	2078	7	NA	NA	3938	-3	intron_retention	TRUE	canonical	0	0	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGCTTCCTATCCAC	490	False	NA	-20	True	AATAAA	-12	NA	165134959	165131077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165134592_165134701
ES.20730.57	chr2	-	3448	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	76.2790272617579	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGACTGCTTCCTATCCA	NA	False	NA	-21	True	AATAAA	-11	NA	165168400	165131078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139475_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.58	chr2	-	3439	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	76.2790272617579	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGACTGCTTCCTATCCA	NA	False	NA	-21	True	AATAAA	-11	NA	165168385	165131078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140650_165143856_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.59	chr2	-	3402	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	-20	84	-20	-84	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCATGAGCTGTGAGTG	NA	False	NA	-39	True	AATAAA	-25	NA	165168419	165131158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.6	chr2	-	3429	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	36	11	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	74.0802774022884	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACACCTCTTCCTCTGC	NA	False	NA	-6	True	AATAAA	-26	NA	165168363	165131063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.61	chr2	-	3396	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	15	91	15	-91	multi-exon	FALSE	canonical	1	2	junction_12	97.9880829442692	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTCAGTCATGAGCT	NA	False	NA	-46	True	AATAAA	-18	NA	165168384	165131165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.64	chr2	-	7615	19	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	-95	intron_retention	FALSE	canonical	3	269	junction_18	31.7319502499715	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGTGCTCTCAGTCATG	NA	False	NA	-50	True	AATAAA	-14	NA	165168387	165131169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.65	chr2	-	3351	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	4	-99	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	74.0802774022884	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTAGTGCTCTCAGT	NA	False	NA	-54	True	AATAAA	-10	NA	165168395	165131173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.66	chr2	-	3307	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	12	-99	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	75.2298311841785	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTAGTGCTCTCAGT	NA	False	NA	-54	True	AATAAA	-10	NA	165168387	165131173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150937_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.68	chr2	-	3322	21	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	33	-105	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	75.0502997995344	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTGTAGTGCT	NA	False	NA	-60	True	AATAAA	-4	NA	165168366	165131179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.69	chr2	-	7029	19	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	-38	-105	intron_retention	FALSE	canonical	0	0	junction_6	80.3300483422403	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTGTAGTGCT	NA	False	NA	-60	True	AATAAA	-4	NA	165168437	165131179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139234_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.70	chr2	-	6230	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	39	-105	intron_retention	FALSE	canonical	3	269	junction_19	30.9689326946178	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTGTAGTGCT	NA	False	NA	-60	True	AATAAA	-4	NA	165168360	165131179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.72	chr2	-	2901	20	NNC	ENSMUSG00000017670.17	novel	3052	20	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_1	75.5158070811242	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCGTGCTTCCTGCTCG	NA	False	NA	NA	False	ACTAAA	-15	NA	165168394	165133031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165133189_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.73	chr2	-	2696	21	NNC	ENSMUSG00000017670.17	novel	3052	20	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74.0091886187114	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGCGTGCTTCCTGCTC	NA	False	NA	NA	False	ACTAAA	-14	NA	165168385	165133032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165133684_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.74	chr2	-	1157	9	NNC	ENSMUSG00000017670.17	novel	639	6	NA	NA	2	1236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	114.629225658206	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTCCACAGCCTTACA	NA	False	NA	NA	False	NA	NA	NA	165168397	165149596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165149982_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.75	chr2	-	737	7	NNC	ENSMUSG00000017670.17	novel	627	5	NA	NA	13	-990	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	130.091847895588	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATCCTCATGGTGGCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	165168386	165151822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165152051_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.76	chr2	-	1341	6	ISM	ENSMUSG00000017670.17	ENSMUST00000103088.10	3052	20	2	19690	2	878	5prime_fragment	FALSE	canonical	3	269	junction_5	37.4561076461503	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAGGCAGCCGTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	165168397	165152721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20730.8	chr2	-	2113	3	NNC	ENSMUSG00000017670.17	novel	2078	7	NA	NA	3885	11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	191	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACACCTCTTCCTCTGC	437	False	NA	-6	True	AATAAA	-26	NA	165135012	165131063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165132482_165134024_165134592_165134884
ES.20730.9	chr2	-	3511	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	1	-10	1	10	multi-exon	FALSE	canonical	1	2	junction_12	97.9880829442692	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCACACCTCTTCCTCTG	NA	False	NA	-7	True	AATAAA	-25	NA	165168398	165131064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ES.20731.1	chr2	-	184	1	Intergenic	novelGene_17131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	165172775	165172591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165172600_165172800
ES.20732.1	chr2	-	5752	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-49	2502	-49	-2502	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTTCTGCCTGTATG	4491	False	NA	NA	False	AATGAA	-34	NA	165230228	165218685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
ES.20732.2	chr2	-	5089	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-53	3169	-53	-3169	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGAGACTTTTACTG	4487	False	NA	0	True	ATTAAA	-17	NA	165230232	165219352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
ES.20732.3	chr2	-	5113	5	NNC	ENSMUSG00000017667.10	novel	8205	5	NA	NA	-48	-3173	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.1827059272082	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGTGTGAGACTTTT	4492	False	NA	-4	True	ATTAAA	-13	NA	165230227	165219356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165223807_165224610_165224704_165225158_165225319_165228845_165228909_165229880
ES.20732.6	chr2	-	3684	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	-15	4536	-15	-4536	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATATATCAATAGT	4525	False	NA	NA	False	AATATA	-15	NA	165230194	165220719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
ES.20733.1	chr2	-	159	1	Intergenic	novelGene_17132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	3569	False	NA	NA	False	NA	NA	NA	165231150	165230991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165231000_165231200
ES.20734.1	chr2	-	3558	3	FSM	ENSMUSG00000027670.5	ENSMUST00000029213.5	3657	3	-23	122	-23	-122	multi-exon	FALSE	canonical	2	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	165242348	165235801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165238219_165239140_165240141_165242207
ES.20735.1	chr2	+	4207	5	NNC	ENSMUSG00000027661.5	novel	3544	5	NA	NA	-92490	-8	intron_retention	FALSE	canonical	0	0	junction_1	0.433012701892219	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGCATATGGTGATTT	NA	False	NA	NA	False	AATAAA	-12	NA	165253216	165361829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165253351_165355231_165355496_165356345_165358276_165359536_165359673_165360086
ES.20735.2	chr2	+	184	1	Intergenic	novelGene_17133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCCAAGTGGCAT	NA	False	NA	NA	False	NA	NA	NA	165284606	165284790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165284600_165284800
ES.20735.3	chr2	+	3423	5	FSM	ENSMUSG00000027661.5	ENSMUST00000029196.5	3544	5	118	3	118	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATATGGTGATTTATATT	NA	False	NA	NA	False	AATAAA	-17	NA	165345824	165361834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165345969_165356345_165357618_165358152_165358276_165359536_165359673_165360086
ES.20736.1	chr2	-	2260	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-16	-364	-16	364	multi-exon	FALSE	canonical	3	240	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTGAGTGGTGGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	165335260	165331665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165333632_165334966
ES.20736.2	chr2	-	3209	1	NIC	ENSMUSG00000039725.7	novel	1880	2	NA	NA	1	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTTTTCGGAGACCTG	NA	False	NA	-22	True	NA	NA	NA	165335243	165332034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165332000_165335200
ES.20736.3	chr2	-	1917	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-47	10	-47	-10	multi-exon	FALSE	canonical	3	240	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACAGTTTTCGGAG	NA	False	NA	-27	True	NA	NA	NA	165335291	165332039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165333632_165334966
ES.20736.4	chr2	-	2008	3	NNC	ENSMUSG00000039725.7	novel	1880	2	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAGAACAGTTTTCGG	NA	False	NA	-29	True	NA	NA	NA	165335253	165332041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165333632_165334195_165334327_165334966
ES.20736.5	chr2	-	1679	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-15	216	-15	-216	multi-exon	FALSE	canonical	3	240	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGAAAGCAGGCTCACAG	NA	False	NA	NA	False	AAAAAG	-20	NA	165335259	165332245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165333632_165334966
ES.20736.6	chr2	-	1003	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	-14	891	-14	177	multi-exon	FALSE	canonical	3	240	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCGTTGGAGTATCGAT	NA	False	NA	NA	False	NA	NA	NA	165335258	165332920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165333632_165334966
ES.20736.7	chr2	-	734	1	Genic_Genomic	ENSMUSG00000039725.7	novel	NA	NA	NA	NA	-2	-1415	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTATTCTTTTCTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	165335246	165334512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_165334500_165335200
ES.20737.2	chr2	+	2352	16	FSM	ENSMUSG00000017897.19	ENSMUST00000088132.13	2447	16	6	89	6	-89	multi-exon	FALSE	canonical	0	0	junction_1	2.44040069569642	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGGAAGAGTGTGGTGA	NA	False	NA	2	True	AATAAA	-18	NA	165436957	165613550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165596360_165596451_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
ES.20737.3	chr2	+	2258	15	NIC	ENSMUSG00000017897.19	novel	2447	16	NA	NA	9	-90	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.70392760439253	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCGGAAGAGTGTGGTG	NA	False	NA	1	True	AATAAA	-17	NA	165436960	165613549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
ES.20737.4	chr2	+	178	1	Intergenic	novelGene_17136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGAGTATGGAGAC	NA	False	NA	NA	False	NA	NA	NA	165546166	165546344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165546200_165546300
ES.20737.5	chr2	+	161	1	Intergenic	novelGene_17137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATAATTTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	165612414	165612575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165612400_165612600
ES.20738.1	chr2	-	287	1	Intergenic	novelGene_17134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	165514938	165514651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165514700_165514900
ES.20739.1	chr2	-	4129	1	Intergenic	novelGene_17135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	165521289	165517160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165517200_165521300
ES.2074.10	chr1	-	3737	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	15	5640	15	481	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCCCCCCCCTTTTTC	NA	False	NA	0	True	TATAAA	-41	NA	180971754	180920342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.11	chr1	-	5757	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	54	463	intron_retention	FALSE	canonical	3	17	junction_17	146.264693430157	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCTGATAGACATTAT	NA	False	NA	-18	True	TATAAA	-23	NA	180971715	180920360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.14	chr1	-	5533	21	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	27	458	intron_retention	FALSE	canonical	2	24	junction_9	150.52251492717	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACCTTTCTGATAGAC	NA	False	NA	-23	True	TATAAA	-18	NA	180971742	180920365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.17	chr1	-	3420	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	35	457	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	147.555608488366	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACACCTTTCTGATAGA	NA	False	NA	-24	True	TATAAA	-17	NA	180971734	180920366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.18	chr1	-	3556	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	17	457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	222.986625437417	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACACCTTTCTGATAGA	NA	False	NA	-24	True	TATAAA	-17	NA	180971752	180920366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180922757_180922853_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.2	chr1	-	9344	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	43	5	43	-5	multi-exon	TRUE	canonical	3	480	junction_18	71.7805568876937	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATACTAGTGATCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	180971726	180914707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.20	chr1	-	3423	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	49	455	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_17	190.607704598094	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATACACCTTTCTGATA	NA	False	NA	-26	True	TATAAA	-15	NA	180971720	180920368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.21	chr1	-	3556	21	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	20	455	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	145.357662336734	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATACACCTTTCTGATA	NA	False	NA	-26	True	TATAAA	-15	NA	180971749	180920368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180969890_180969965_180971615
ES.2074.22	chr1	-	3714	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	-138	5816	-138	305	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTGCTTCTCAGCCTG	NA	False	NA	-3	True	AATATA	-37	NA	180971907	180920518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.24	chr1	-	3533	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	35	305	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_22	135.081365134542	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTGCTTCTCAGCCTG	NA	False	NA	-3	True	AATATA	-37	NA	180971734	180920518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969957_180971615
ES.2074.25	chr1	-	5648	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	9	301	intron_retention	FALSE	canonical	0	0	junction_14	150.401232083534	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCCCTTGCTTCTCAG	NA	False	NA	-7	True	AATATA	-33	NA	180971760	180920522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957954_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.26	chr1	-	3496	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	68	301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	148.306974474183	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCCCTTGCTTCTCAG	NA	False	NA	-7	True	AATATA	-33	NA	180971701	180920522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929101_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.27	chr1	-	3274	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	43	300	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_17	190.607704598094	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCCCTTGCTTCTCA	NA	False	NA	-8	True	AATATA	-32	NA	180971726	180920523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.3	chr1	-	7170	16	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	13792	1322	8270	-1322	3prime_fragment	FALSE	canonical	3	564	junction_6	36.7710030685412	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCAGTTGTCAAGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	180957977	180916024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958
ES.2074.32	chr1	-	3522	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	50	289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	165.744027478	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGCCAGAAAAGTCC	NA	False	NA	-19	True	GATAAA	-39	NA	180971719	180920534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957954_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969882_180969965_180971615
ES.2074.33	chr1	-	3541	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	13	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	146.216364359847	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGCCAGAAAAGTCC	NA	False	NA	-19	True	GATAAA	-39	NA	180971756	180920534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964443_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.4	chr1	-	7654	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	47	1691	47	-1691	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGCTGGAGAAATAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	180971722	180916393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.41	chr1	-	3441	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	24	5927	24	194	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGACTAAATGCTGTAC	NA	False	NA	-114	True	NA	NA	NA	180971745	180920629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.42	chr1	-	3428	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	26	191	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_22	135.081365134542	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGGGACTAAATGCTG	NA	False	NA	-117	True	NA	NA	NA	180971743	180920632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969957_180971615
ES.2074.44	chr1	-	3277	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	12	6103	12	18	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAACAGGAAACGCTC	NA	False	NA	NA	False	TATAAA	-25	NA	180971757	180920805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.45	chr1	-	2911	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	50	-60	combination_of_known_splicesites	FALSE	canonical	2	24	junction_10	146.974105729894	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTTCACCTTGAAATT	NA	False	NA	98	True	AATACA	-29	NA	180971719	180920883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.46	chr1	-	3106	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	19	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	148.321915089672	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTACAGGATCAGTCC	NA	False	NA	18	True	AATAAA	-41	NA	180971750	180920963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966824_180966872_180969890_180969965_180971615
ES.2074.47	chr1	-	3108	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	7	6277	7	-156	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAACATCTGAACCTT	NA	False	NA	2	True	AATAAA	-25	NA	180971762	180920979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.48	chr1	-	5136	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	54	-158	intron_retention	FALSE	canonical	3	17	junction_17	146.264693430157	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAACATCTGAACC	NA	False	NA	0	True	AATAAA	-23	NA	180971715	180920981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.49	chr1	-	3072	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	26	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	148.321915089672	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971743	180920982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966832_180966872_180969890_180969965_180971615
ES.2074.5	chr1	-	6617	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	4	2771	4	1743	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATGCATAAAAGTTATAAA	NA	False	NA	NA	False	AATAAA	-23	NA	180971765	180917473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.50	chr1	-	3072	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	27	-159	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_21	167.307802646638	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971742	180920982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969957_180971615
ES.2074.52	chr1	-	3091	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	29	-159	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_21	113.919247896579	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971740	180920982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969882_180969965_180971615
ES.2074.53	chr1	-	5174	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	-5	-159	intron_retention	FALSE	canonical	0	0	junction_14	216.105384974475	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971774	180920982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954525_180954605_180957073_180957209_180957954_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969965_180971615
ES.2074.56	chr1	-	7372	15	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	7877	-159	intron_retention	FALSE	canonical	3	553	junction_14	38.4113078588659	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180958370	180920982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180954605_180957073_180957209_180957958_180958036_180958302
ES.2074.58	chr1	-	3193	24	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	13	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.062196585393	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATCTATTAACATCTGAA	NA	False	NA	-2	True	AATAAA	-21	NA	180971756	180920983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180922757_180922853_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.6	chr1	-	6331	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	34	1737	intron_retention	FALSE	canonical	2	24	junction_10	146.974105729894	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGATCATGCATAAAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	180971735	180917479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.61	chr1	-	2933	21	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	27	-161	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	145.357662336734	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATCTATTAACATCTGA	NA	False	NA	-3	True	AATAAA	-20	NA	180971742	180920984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180969890_180969965_180971615
ES.2074.62	chr1	-	4923	21	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	18	-161	intron_retention	FALSE	canonical	2	24	junction_9	150.52251492717	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATCTATTAACATCTGA	NA	False	NA	-3	True	AATAAA	-20	NA	180971751	180920984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.64	chr1	-	5193	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	14	-164	intron_retention	FALSE	canonical	1	1	junction_8	151.527431042292	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGATATCTATTAACATC	NA	False	NA	-6	True	AATAAA	-17	NA	180971755	180920987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939977_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.66	chr1	-	3164	24	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	50	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.062196585393	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGATATCTATTAACATC	NA	False	NA	-6	True	AATAAA	-17	NA	180971719	180920987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180922757_180922865_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.69	chr1	-	3294	25	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	17	-165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	241.650229326052	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGATATCTATTAACAT	NA	False	NA	-7	True	AATAAA	-16	NA	180971752	180920988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180922757_180922853_180924700_180924790_180926691_180926769_180929093_180929201_180931132_180931243_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.7	chr1	-	5384	2	FSM	ENSMUSG00000026516.9	ENSMUST00000195209.2	1193	2	-849	-3342	-849	1735	multi-exon	FALSE	canonical	3	652	junction_1	0	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTGATCATGCATAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	180923939	180917481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548
ES.2074.70	chr1	-	2805	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	38	-169	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_17	212.265471486739	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAACAGATATCTATTA	NA	False	NA	-11	True	AATAAA	-12	NA	180971731	180920992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969965_180971615
ES.2074.71	chr1	-	4809	21	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	9	-288	intron_retention	FALSE	canonical	0	0	junction_17	197.830129151249	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCTCCCAGGCTTTGA	NA	False	NA	NA	False	AGTAAA	-24	NA	180971760	180921111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966631_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.72	chr1	-	3757	2	FSM	ENSMUSG00000026516.9	ENSMUST00000195209.2	1193	2	-2854	290	-2854	-290	multi-exon	FALSE	canonical	3	652	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTCTCCCAGGCTTT	NA	False	NA	NA	False	AGTAAA	-22	NA	180925944	180921113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548
ES.2074.73	chr1	-	5050	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	9	-293	intron_retention	FALSE	canonical	3	480	junction_17	72.5892678986292	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACTGTCTCCCAGGC	NA	False	NA	NA	False	AGTAAA	-19	NA	180971760	180921116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.74	chr1	-	2961	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	16	6415	16	-294	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACCACTGTCTCCCAGG	NA	False	NA	NA	False	AGTAAA	-18	NA	180971753	180921117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.75	chr1	-	4676	21	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	18	-403	intron_retention	FALSE	canonical	2	24	junction_9	183.189921938954	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCTAGGCCCCAAGAAC	NA	False	NA	64	True	AGTAAA	-31	NA	180971751	180921226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969965_180971615
ES.2074.76	chr1	-	2851	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	15	6526	15	-405	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGCTAGGCCCCAAGA	NA	False	NA	62	True	AGTAAA	-29	NA	180971754	180921228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.78	chr1	-	4916	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	19	-417	intron_retention	FALSE	canonical	3	480	junction_17	72.5892678986292	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTGATAAACCATGTGC	NA	False	NA	50	True	AGTAAA	-17	NA	180971750	180921240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.8	chr1	-	4802	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	35	1731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	213.025296290145	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATCTTGATCATGCAT	NA	False	NA	NA	False	AATAAA	-11	NA	180971734	180917485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180919765_180921278_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969957_180971615
ES.2074.81	chr1	-	2866	24	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	18	-491	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	185.935584512222	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAGAACCAGTTATCT	NA	False	NA	-24	True	NA	NA	NA	180971751	180921314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180922620_180923150_180923255_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.82	chr1	-	4686	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	29	-633	intron_retention	FALSE	canonical	3	17	junction_17	146.264693430157	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCAGAGGTCCCTCAG	NA	False	NA	NA	False	NA	NA	NA	180971740	180921456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.83	chr1	-	4529	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	48	-635	intron_retention	FALSE	canonical	0	0	junction_5	226.71449075315	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGCAGAGGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	180971721	180921458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180931132_180931243_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.84	chr1	-	4179	21	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	43	8325	43	519	5prime_fragment	FALSE	canonical	3	480	junction_16	74.1277781941426	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTAATCCAGTTTTGTG	NA	False	NA	NA	False	TATAAA	-11	NA	180971726	180923027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.85	chr1	-	3706	21	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	17	8824	17	20	5prime_fragment	FALSE	canonical	3	480	junction_16	74.1277781941426	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGTAAAATGGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	180971752	180923526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.87	chr1	-	3435	20	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	17	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	202.357641215865	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	180971752	180923566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939977_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.88	chr1	-	3453	21	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	18	9076	18	-232	5prime_fragment	FALSE	canonical	3	480	junction_16	74.1277781941426	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTAATGATAATAAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	180971751	180923778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.89	chr1	-	174	1	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATTTTATCC	846	False	NA	NA	False	NA	NA	NA	180946737	180946563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_180946600_180946700
ES.2074.9	chr1	-	4779	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	54	4559	54	-45	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTGCTCCATGTTA	NA	False	NA	NA	False	AATACA	-16	NA	180971715	180919261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ES.2074.90	chr1	-	2684	5	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	50	-8	intron_retention	TRUE	non_canonical	0	0	junction_1	312.534298117823	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180971719	180963726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_180964227_180964290_180964496_180966635_180966733_180966818_180966872_180969890
ES.2074.91	chr1	-	1924	2	Genic_Genomic	ENSMUSG00000026516.9	novel	9392	23	NA	NA	531	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180965716	180963726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_180964271_180964336
ES.20740.1	chr2	+	173	1	Intergenic	novelGene_17138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	165615612	165615785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165615600_165615800
ES.20741.1	chr2	+	1974	4	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	53.0806514236172	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATCCCTTTGGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	165652178	165671131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165652330_165657273_165657453_165669273_165669633_165669846
ES.20741.2	chr2	+	5479	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	12.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTGTATGAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	165652182	165668270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165652330_165657273_165657453_165663117
ES.20741.3	chr2	+	1332	3	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	9	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGATGAAGGCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	165652195	165659667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165652330_165657273_165657453_165658648
ES.20741.4	chr2	+	643	1	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGAGGGAAACACCTGC	1731	False	NA	NA	False	NA	NA	NA	165657066	165657709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165657100_165657700
ES.20741.5	chr2	+	8123	1	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGGTCTGGTCTTTAT	2744	False	NA	NA	False	NA	NA	NA	165658079	165666202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165658100_165666200
ES.20741.6	chr2	+	1256	1	Intergenic	novelGene_17139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	513	False	NA	NA	False	NA	NA	NA	165665099	165666355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165665100_165666400
ES.20741.7	chr2	+	3586	1	Antisense	novelGene_ENSMUSG00000039671.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATTTTTTTTTTTTGA	886	False	NA	NA	False	ATTAAA	-27	NA	165665472	165669058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165665500_165669100
ES.20742.1	chr2	+	178	1	Intergenic	novelGene_17140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAATAAATCTTGAGA	NA	False	NA	NA	False	NA	NA	NA	165704554	165704732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165704600_165704700
ES.20743.1	chr2	+	2089	1	Intergenic	novelGene_17141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAACGATTACTTGA	NA	False	NA	NA	False	NA	NA	NA	165705819	165707908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165705800_165707900
ES.20744.1	chr2	+	175	1	Intergenic	novelGene_17142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	165714369	165714544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165714400_165714500
ES.20745.1	chr2	+	234	1	Intergenic	novelGene_17143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAATAAAATCAGG	2852	False	NA	NA	False	NA	NA	NA	165732942	165733176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165732900_165733200
ES.20746.1	chr2	+	179	1	Intergenic	novelGene_17144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	3996	False	NA	NA	False	NA	NA	NA	165734086	165734265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165734100_165734300
ES.20747.1	chr2	+	384	1	Intergenic	novelGene_17146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAAAACCCTTTCT	5380	False	NA	NA	False	NA	NA	NA	165735470	165735854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165735500_165735900
ES.20747.2	chr2	+	173	1	Intergenic	novelGene_17145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	5380	False	NA	NA	False	NA	NA	NA	165735470	165735643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165735500_165735600
ES.20748.1	chr2	-	5133	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	52	945	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATTTTTATCATTTA	NA	False	NA	NA	False	NA	NA	NA	165740884	165625126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.10	chr2	-	4421	20	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	530	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	180.891957469116	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165738340	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165738212
ES.20748.101	chr2	-	2621	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	14	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.75921269257	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165740922	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165740835
ES.20748.102	chr2	-	2809	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-907	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.75921269257	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165727701	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165727426
ES.20748.103	chr2	-	2303	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	394	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.87944707988	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165703531	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
ES.20748.104	chr2	-	2112	10	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	394	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.884505875567	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165703531	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
ES.20748.105	chr2	-	2235	10	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	2	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	227.62629108928	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165700091	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165687940_165688160_165693919_165694069_165699974
ES.20748.106	chr2	-	2734	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-907	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.700972289742	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAGAGCTT	NA	False	NA	5	True	NA	NA	NA	165727701	165669076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527_165726759_165727426
ES.20748.107	chr2	-	2635	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.140936385697	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	False	NA	-20	True	AATAAA	-22	NA	165726594	165669101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687465_165687842_165688026_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.108	chr2	-	2155	10	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	35	-1	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	227.869358283303	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGCTCTCTTGTTCCG	NA	False	NA	-21	True	AATAAA	-21	NA	165740901	165669102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669852_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165740835
ES.20748.109	chr2	-	2504	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.822197151246	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGCTCTCTTGTTCCG	NA	False	NA	-21	True	AATAAA	-21	NA	165740970	165669102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687663_165687842_165688026_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.110	chr2	-	6142	9	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	7413	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	247.729155278502	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTGCTCTCTTGTTC	NA	False	NA	-23	True	AATAAA	-19	NA	165686629	165669104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669850_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682112_165682208_165683450_165683552
ES.20748.111	chr2	-	5483	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	35	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	172.873045903634	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTTTGCTCTCTTGTT	NA	False	NA	-24	True	AATAAA	-18	NA	165740901	165669105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.113	chr2	-	4118	2	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	20605	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTTTGCTCTCTTGTT	NA	False	NA	-24	True	AATAAA	-18	NA	165673437	165669105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851
ES.20748.114	chr2	-	5410	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	33	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	170.984356009548	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTTTGCTCTCTTGTT	NA	False	NA	-24	True	AATAAA	-18	NA	165740903	165669105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.115	chr2	-	3969	9	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	9584	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.729155278502	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTTTGCTCTCTTGTT	NA	False	NA	-24	True	AATAAA	-18	NA	165684458	165669105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682112_165682208_165683450_165683552
ES.20748.116	chr2	-	2749	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-13	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	204.968048306184	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTTTGCTCTCTTGTT	NA	False	NA	-24	True	AATAAA	-18	NA	165726581	165669105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687519_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.117	chr2	-	1885	8	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.321862716168	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165700085	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165693919_165694069_165699974
ES.20748.119	chr2	-	2377	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.242467103849	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165740901	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527_165726759_165740835
ES.20748.12	chr2	-	4208	20	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-1910	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	177.763374108716	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165742846	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165742775
ES.20748.120	chr2	-	5470	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	181.800027502748	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165726581	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669643_165669854_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.121	chr2	-	6614	8	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	6821	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.959423361001	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165687221	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682111_165682206_165683450_165683552
ES.20748.122	chr2	-	2264	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	261	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.770034001602	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165721561	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165721493
ES.20748.124	chr2	-	2699	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-295	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.950709130374	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165727089	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165726892
ES.20748.126	chr2	-	2281	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.597086937876	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165726551	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726098_165726160_165726527
ES.20748.127	chr2	-	2302	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.441219410632	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165700076	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165699974
ES.20748.129	chr2	-	2082	10	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	394	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.681636223356	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165703531	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165687940_165688085_165693919_165694069_165703460
ES.20748.13	chr2	-	4184	19	NIC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	58	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_18	180.52515983467	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740878	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165740835
ES.20748.130	chr2	-	1931	9	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	5990	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.292951724087	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	165688052	165669108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669850_165670596_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940
ES.20748.131	chr2	-	2232	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.918056793441	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTCCCCTTTGCTCTCT	NA	False	NA	-28	True	AATAAA	-14	NA	165740922	165669109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670601_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.132	chr2	-	2235	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-40	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.22696141422	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTCCCCTTTGCTCTCT	NA	False	NA	-28	True	AATAAA	-14	NA	165726608	165669109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.133	chr2	-	2259	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-848	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.592795576866	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTCCCCTTTGCTCTCT	NA	False	NA	-28	True	AATAAA	-14	NA	165725046	165669109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165724982
ES.20748.134	chr2	-	2128	10	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	236.756216756476	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAACTCCCCTTTGCTCTC	NA	False	NA	-29	True	AATAAA	-13	NA	165700092	165669110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669852_165670610_165676809_165676888_165679200_165679257_165680727_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165699974
ES.20748.136	chr2	-	2198	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	399	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.116374895349	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAACTCCCCTTTGCTCTC	NA	False	NA	-29	True	AATAAA	-13	NA	165703526	165669110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703451
ES.20748.137	chr2	-	2404	15	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	5	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.467232113151	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAACTCCCCTTTGCTC	NA	False	NA	-31	True	AATAAA	-11	NA	165726563	165669112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669850_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688156_165693919_165694069_165694787_165694800_165717624_165717696_165723007_165723039_165726098_165726160_165726527
ES.20748.138	chr2	-	2561	13	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-1912	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.950709130374	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTCGTGTGCAAACTC	NA	False	NA	-41	True	AATAAA	-1	NA	165742848	165669122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165742775
ES.20748.14	chr2	-	4688	22	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	192.28826149873	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726581	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687519_165687842_165688057_165688160_165693919_165694069_165717624_165717696_165726098_165726160_165726527
ES.20748.141	chr2	-	2812	2	ISM	ENSMUSG00000039671.19	ENSMUST00000136842.2	629	6	41	32983	41	3	5prime_fragment	FALSE	canonical	3	218	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165740895	165714943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165717696_165740835
ES.20748.15	chr2	-	4179	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_10	176.012009533441	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726610	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670244_165670359_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.16	chr2	-	4313	19	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	374	1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	177.383599461801	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165703551	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
ES.20748.18	chr2	-	5248	23	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	191.543965994993	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726597	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.19	chr2	-	4280	20	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	33	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.564509023521	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740903	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.2	chr2	-	4204	19	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	329	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.419752321806	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCGTTTCTTCATGGCTG	NA	False	NA	0	True	ATTAAA	-21	NA	165703596	165626071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
ES.20748.20	chr2	-	4402	20	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	375	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	181.140966822792	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165721447	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165721413
ES.20748.21	chr2	-	4297	19	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	399	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	183.536596074912	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165703526	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703451
ES.20748.22	chr2	-	4296	19	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_15	172.118974427646	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726569	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.23	chr2	-	4222	19	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	393	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	180.965253127517	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165703532	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703451
ES.20748.25	chr2	-	4488	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	171.572408658101	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726648	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.26	chr2	-	4453	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740996	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.27	chr2	-	5473	10	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	27971	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.3977759503657	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165666071	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165651262_165664755
ES.20748.28	chr2	-	5235	23	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	190.118797136931	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740893	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.29	chr2	-	4485	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_20	176.406037311652	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740878	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165740835
ES.20748.3	chr2	-	4458	20	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.691674028171	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCGTTTCTTCATGGCT	NA	False	NA	-1	True	ATTAAA	-20	NA	165740924	165626072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.30	chr2	-	4289	21	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_19	182.342061795955	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740901	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165694787_165694800_165717624_165717696_165740835
ES.20748.31	chr2	-	4383	19	NIC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_18	180.029704339157	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165700061	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165699974
ES.20748.32	chr2	-	3847	17	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	166.194903934357	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740897	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165693919_165694069_165717624_165717696_165740835
ES.20748.33	chr2	-	4339	21	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	172.600543162529	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740897	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165678276_165678343_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.34	chr2	-	4166	14	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	20342	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	73.7444010511343	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165673700	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165673571
ES.20748.35	chr2	-	3975	16	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	5971	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	196.640518035662	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165688071	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940
ES.20748.37	chr2	-	4899	21	NIC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_20	188.08617705722	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740900	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165740835
ES.20748.38	chr2	-	3248	10	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	44346	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	72.9857080547069	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165649696	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165637387_165637499_165637613_165638082_165639853_165639935_165647106_165647298_165649438
ES.20748.4	chr2	-	3705	8	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	45528	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	57.5173443229013	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCGTTTCTTCATGGCT	NA	False	NA	-1	True	ATTAAA	-20	NA	165648514	165626072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629164_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106
ES.20748.42	chr2	-	5017	23	FSM	ENSMUSG00000039671.19	ENSMUST00000177633.8	5093	23	73	3	-30	0	multi-exon	FALSE	canonical	3	8	junction_11	189.66739047149	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726598	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
ES.20748.43	chr2	-	4300	21	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	192.478693626074	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740901	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629164_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639096_165639199_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.44	chr2	-	4256	19	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	237	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	183.362968985184	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165703688	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703653
ES.20748.46	chr2	-	4089	21	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_10	175.800874571203	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726596	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670244_165670359_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
ES.20748.47	chr2	-	4247	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.212551861858	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726638	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
ES.20748.48	chr2	-	4170	19	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_18	176.898947578331	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165700079	165626074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165699974
ES.20748.49	chr2	-	4716	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	-907	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	176.406037311652	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165727701	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165727426
ES.20748.5	chr2	-	3646	17	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	201.527748942298	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726581	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726098_165726160_165726527
ES.20748.52	chr2	-	4345	20	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-2178	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	180.891957469116	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165743114	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165743060
ES.20748.53	chr2	-	4499	19	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	255	-1	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_9	185.045706732815	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165703670	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649844_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
ES.20748.55	chr2	-	4437	20	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-1910	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	180.80225956473	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165742846	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165742775
ES.20748.56	chr2	-	4097	20	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	191.912506034128	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165726572	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165693919_165694069_165717624_165717696_165726098_165726160_165726527
ES.20748.57	chr2	-	3298	11	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	22722	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.7874216187062	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165671320	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629164_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165671244
ES.20748.58	chr2	-	4191	20	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-2180	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	178.112090823467	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165743116	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165743060
ES.20748.59	chr2	-	8152	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	33	-1	intron_retention	FALSE	canonical	0	0	junction_5	188.078780036452	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165740903	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165637387_165637499_165637613_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165688160_165693919_165694069_165717624_165717696_165726527_165726759_165740835
ES.20748.6	chr2	-	4581	21	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-689	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	178.777767074097	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165727483	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527_165726759_165727426
ES.20748.60	chr2	-	4215	19	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	389	-1	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.693461685192	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165703536	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
ES.20748.61	chr2	-	3195	2	NIC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	60115	-1	intron_retention	FALSE	canonical	3	176	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165633927	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165629168_165633824
ES.20748.62	chr2	-	4437	21	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-1857	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	187.617536493794	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGGCGTTTCTTCATG	NA	False	NA	-4	True	ATTAAA	-17	NA	165742793	165626075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165742520_165742649_165742775
ES.20748.64	chr2	-	4185	20	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-841	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	185.235225166973	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165725039	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649844_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165724982
ES.20748.65	chr2	-	4356	19	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_18	183.317036312693	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165740897	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165740835
ES.20748.68	chr2	-	4178	17	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	5967	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	191.292928188681	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165688075	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670606_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687663
ES.20748.7	chr2	-	6088	14	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	9143	1	intron_retention	FALSE	canonical	1	1	junction_1	192.664376910153	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165684899	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683
ES.20748.70	chr2	-	4348	19	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	411	-2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	177.634395304124	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165703514	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
ES.20748.71	chr2	-	4058	19	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	179.287521685417	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165726595	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165693919_165694069_165717624_165717696_165726527
ES.20748.72	chr2	-	3941	20	NNC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	177.540460060373	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165726566	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670359_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
ES.20748.74	chr2	-	4505	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	178.745321617099	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165740926	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687519_165687842_165688057_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.75	chr2	-	4818	21	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	187.778566402026	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCGTTTCTTCAT	NA	False	NA	-5	True	ATTAAA	-16	NA	165740897	165626076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165687940_165688160_165717624_165717696_165740835
ES.20748.77	chr2	-	4046	18	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-29	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	195.262701229266	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATGATGGCGTTTCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	165726597	165626079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165726527
ES.20748.78	chr2	-	4273	20	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	-1912	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	178.034684908506	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTTTGATGATGGCG	NA	False	NA	-14	True	ATTAAA	-7	NA	165742848	165626085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165742775
ES.20748.79	chr2	-	5199	23	NIC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-1	-11	combination_of_known_junctions	FALSE	canonical	3	7	junction_22	197.208541087058	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTTTGATGATGGCG	NA	False	NA	-14	True	ATTAAA	-7	NA	165726131	165626085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726098
ES.20748.8	chr2	-	4283	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	-45	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165740981	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.80	chr2	-	4307	19	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	22	-11	combination_of_known_splicesites	FALSE	canonical	3	46	junction_18	179.796258149174	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTTTGATGATGGCG	NA	False	NA	-14	True	ATTAAA	-7	NA	165700071	165626085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165699974
ES.20748.81	chr2	-	3316	13	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	-28	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	95.2643981535366	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTTTTTTGATGATG	NA	False	NA	-17	True	ATTAAA	-4	NA	165726596	165626088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649806_165687975_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.82	chr2	-	3776	19	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	35	-282	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	176.899610576796	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCGTTTACTTTCTCT	NA	False	NA	-8	True	AAAAAG	-44	NA	165740901	165626356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165693919_165694069_165717624_165717696_165740835
ES.20748.84	chr2	-	4063	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	39	-291	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTTTAGTCTCCGTTT	NA	False	NA	-17	True	AAAAAG	-35	NA	165740897	165626365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.85	chr2	-	3897	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	39	-301	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCGTTGTACATTTTA	NA	False	NA	-27	True	AAAAAG	-25	NA	165740897	165626375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.86	chr2	-	3969	20	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	-29	-312	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.553681331215	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTCCAGTACATTCCGT	NA	False	NA	-38	True	AAAAAG	-14	NA	165726597	165626386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.87	chr2	-	1460	7	NNC	ENSMUSG00000039671.19	novel	6188	24	NA	NA	55517	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	64.8485414896383	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	165638525	165627228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638333_165638380
ES.20748.88	chr2	-	2501	14	NIC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	9	14973	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	211.298857310189	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTGTTTCCTGTGAGT	NA	False	NA	NA	False	AATATA	-13	NA	165726559	165654075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.89	chr2	-	6125	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-48	3704	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	176.27832988424	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTGGGGACCTGATTT	NA	False	NA	NA	False	GGGGCT	-28	NA	165726616	165665344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669850_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ES.20748.9	chr2	-	4310	21	NNC	ENSMUSG00000039671.19	novel	4130	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_20	192.874855800335	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCGTTTCTTCATGGC	NA	False	NA	-2	True	ATTAAA	-19	NA	165726568	165626073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165627659_165629083_165629164_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726098_165726160_165726527
ES.20748.90	chr2	-	2349	9	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	6037	392	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	172.244557243473	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACAAATTGCGTCCCTT	NA	False	NA	NA	False	NA	NA	NA	165688005	165668656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940
ES.20748.91	chr2	-	2269	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	384	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.268458151617	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGTTGTGTTTAATT	NA	False	NA	36	True	AATAGA	-16	NA	165703541	165669045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
ES.20748.92	chr2	-	2423	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-63	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	165.617901376024	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGTTGTGTTTAATT	NA	False	NA	36	True	AATAGA	-16	NA	165740999	165669045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.94	chr2	-	2320	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	44	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.619190783431	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGTTGTGTTTAATT	NA	False	NA	36	True	AATAGA	-16	NA	165740892	165669045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165740835
ES.20748.96	chr2	-	2288	11	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	-44	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.609633024806	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGTTGTGTTTAATT	NA	False	NA	36	True	AATAGA	-16	NA	165740980	165669045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
ES.20748.97	chr2	-	2286	13	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.556723421861	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGTTGTGTTTAAT	NA	False	NA	35	True	AATAGA	-15	NA	165726114	165669046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165694787_165694800_165717624_165717696_165726098
ES.20748.98	chr2	-	2415	12	NNC	ENSMUSG00000039671.19	novel	2515	11	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.51247640718	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGTTGTGTTTAAT	NA	False	NA	35	True	AATAGA	-15	NA	165740917	165669046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
ES.20748.99	chr2	-	2309	11	NNC	ENSMUSG00000039671.19	novel	2484	11	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.916750175421	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGTTGTGTTTAAT	NA	False	NA	35	True	AATAGA	-15	NA	165700096	165669046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165669638_165669851_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165699974
ES.20749.1	chr2	+	208	1	Intergenic	novelGene_17147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTCTCAGGGGTTGA	NA	False	NA	NA	False	AAGAAA	-7	NA	165751161	165751369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165751200_165751400
ES.2075.1	chr1	+	177	1	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGCAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	181017393	181017570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181017400_181017600
ES.2075.3	chr1	+	217	2	Antisense	novelGene_ENSMUSG00000038733.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACTAGTGAGTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	181017395	181019072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181017406_181018865
ES.2075.4	chr1	+	220	1	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACTAGTGAGTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	181018852	181019072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181018900_181019100
ES.20750.1	chr2	-	208	1	Intergenic	novelGene_17148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	982	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGACAAACCGTGGTA	NA	False	NA	NA	False	NA	NA	NA	165758384	165758176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165758200_165758400
ES.20751.1	chr2	+	177	1	Intergenic	novelGene_17149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTAGAG	NA	False	NA	NA	False	NA	NA	NA	165762765	165762942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165762800_165762900
ES.20752.1	chr2	-	220	1	Intergenic	novelGene_17150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAGCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	165768107	165767887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165767900_165768100
ES.20753.1	chr2	+	3480	1	Intergenic	novelGene_17151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	165772062	165775542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165772100_165775500
ES.20754.1	chr2	+	175	1	Intergenic	novelGene_17152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGGAGAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	165790966	165791141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165791000_165791100
ES.20755.1	chr2	+	177	1	Intergenic	novelGene_17153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	165821815	165821992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165821800_165822000
ES.20756.1	chr2	-	1811	5	NNC	ENSMUSG00000084816.2	novel	830	6	NA	NA	2807	22790	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.82915619758885	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGAAGTATCAGTGTG	2994	False	NA	NA	False	NA	NA	NA	165825037	165795886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165796890_165815282_165815344_165821400_165821678_165822891_165823068_165824743
ES.20756.2	chr2	-	761	5	NNC	ENSMUSG00000084816.2	novel	830	6	NA	NA	2248	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAAACCATGTATGTG	2435	False	NA	NA	False	AATAAA	-19	NA	165825596	165818685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165818836_165821204_165821362_165821536_165821678_165822891_165823068_165825459
ES.20756.3	chr2	-	2480	1	NIC	ENSMUSG00000084816.2	novel	830	6	NA	NA	86	-6602	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAACACTAAACCCCTC	273	False	NA	NA	False	NA	NA	NA	165827758	165825278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165825300_165827800
ES.20757.1	chr2	+	3633	17	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-49	-5755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	60.732990159797	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCAGCCATGTCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	165834506	165902367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902117
ES.20757.11	chr2	+	5572	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	63.358418984365	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834539	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.12	chr2	+	6426	22	NIC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	140	junction_19	39.4103362479262	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834539	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165911300_165911730_165911873_165912051
ES.20757.13	chr2	+	5695	24	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	62.6172699442742	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834539	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896370_165896444_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.14	chr2	+	5720	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	60.7077404625318	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834539	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890428_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.15	chr2	+	5232	23	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-15	-532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.7628198975972	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCTGCACTCTGA	NA	False	NA	15	True	AATAAA	-15	NA	165834540	165912858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893251_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165898996_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.19	chr2	+	3961	16	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	-4	11026	-4	-5758	5prime_fragment	FALSE	canonical	3	211	junction_15	19.6015872373189	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCCAGCCATGTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	165834551	165902364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614
ES.20757.2	chr2	+	5913	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	78.5937365527992	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834521	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891567_165891692_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.20	chr2	+	5599	22	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.5782581082171	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834551	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834656_165889433_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.21	chr2	+	4991	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	-1	767	-1	503	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCGCCCCAATGTGCA	NA	False	NA	NA	False	NA	NA	NA	165834554	165912623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.22	chr2	+	6818	22	NIC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	0	-9	intron_retention	FALSE	canonical	3	143	junction_18	38.8909166947829	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAACTGTAGCCCACTC	NA	False	NA	7	True	ATTAAA	-13	NA	165834556	165913381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.23	chr2	+	7920	21	NIC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	0	-2	intron_retention	FALSE	canonical	3	143	junction_18	39.2435982040383	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834556	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165909566_165910251_165911300_165911730_165911873_165912051
ES.20757.24	chr2	+	5676	22	NIC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	65.7850895304943	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834558	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.25	chr2	+	5664	22	NIC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	2	-6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_18	61.6035529204794	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834558	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.26	chr2	+	5024	23	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	2	-532	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	63.1529855729471	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCTGCACTCTGA	NA	False	NA	15	True	AATAAA	-15	NA	165834558	165912858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.27	chr2	+	4803	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	2	-531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	64.1863248482156	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTCCTGCACTCTGAG	NA	False	NA	16	True	AATAAA	-16	NA	165834558	165912859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165897113_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.28	chr2	+	5579	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	3	175	2	-175	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTACGCACTTTGTTAA	NA	False	NA	NA	False	TTTAAA	-25	NA	165834558	165913215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.29	chr2	+	5330	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	64.1863248482156	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834560	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165897113_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.3	chr2	+	5780	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-23	1774	-22	-2	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834533	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.30	chr2	+	5182	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	7	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.3581790187663	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCCAGGTCCTGCACT	NA	False	NA	11	True	AATAAA	-11	NA	165834563	165912854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894308_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.31	chr2	+	5670	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	62.7461655039113	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834563	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051_165912386_165912462
ES.20757.32	chr2	+	5755	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	62.854942539572	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834566	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165898996_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.33	chr2	+	5130	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	11	2390	11	-618	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTCTTTCAAG	NA	False	NA	8	True	NA	NA	NA	165834567	165912772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.34	chr2	+	5120	22	NIC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	23	-532	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	61.6035529204794	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCTGCACTCTGA	NA	False	NA	15	True	AATAAA	-15	NA	165834579	165912858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.35	chr2	+	6280	22	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	25	-534	intron_retention	FALSE	canonical	3	9	junction_11	64.1163200311049	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCAGGTCCTGCACTCT	NA	False	NA	13	True	AATAAA	-13	NA	165834581	165912856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165898996_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.36	chr2	+	5824	24	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.8564055940518	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTAGCCCACTCAT	NA	False	NA	9	True	ATTAAA	-15	NA	165834581	165913383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891059_165891157_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.37	chr2	+	5121	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	25	-535	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	62.4186124149152	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTCCTGCACTC	NA	False	NA	12	True	AATAAA	-12	NA	165834581	165912855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896370_165896444_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.39	chr2	+	5785	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	25	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.1815888168546	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTGTAGCCCACTCA	NA	False	NA	8	True	ATTAAA	-14	NA	165834581	165913382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165892584_165892647_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.40	chr2	+	5664	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	78.021639187308	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834581	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165898996_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051_165912386_165912462
ES.20757.41	chr2	+	4555	23	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	25	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	76.8072746425528	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCTGCACTCTGA	NA	False	NA	15	True	AATAAA	-15	NA	165834581	165912858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912497
ES.20757.44	chr2	+	5159	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	27	-519	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	60.7077404625318	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGAGTCAGAAGCGAGC	NA	False	NA	28	True	AATAAA	-28	NA	165834583	165912871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890428_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.45	chr2	+	5552	22	NIC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	27	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	65.5358862071185	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834583	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.47	chr2	+	5280	23	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	76.9157664199411	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834585	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907679_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912497
ES.20757.48	chr2	+	5290	24	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	32	-534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.8564055940518	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCAGGTCCTGCACTCT	NA	False	NA	13	True	AATAAA	-13	NA	165834588	165912856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891059_165891157_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.5	chr2	+	5269	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	-23	2285	-22	-513	multi-exon	FALSE	canonical	3	140	junction_19	38.5042929880864	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGAAGCGAGCAGTGCT	NA	False	NA	34	True	AATAAA	-34	NA	165834533	165912877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.51	chr2	+	5035	23	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	45	-622	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	60.4939208748277	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	165834601	165912768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890428_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.52	chr2	+	5355	22	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	47	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0659267085348	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	False	NA	10	True	ATTAAA	-16	NA	165834603	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834656_165889426_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.55	chr2	+	5629	22	NNC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-13034	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	65.2530744012944	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	1765	False	NA	10	True	ATTAAA	-16	NA	165876803	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902853_165907684_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.56	chr2	+	4835	19	NIC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-136	-535	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	65.5047119217436	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTCCTGCACTC	4867	False	NA	12	True	AATAAA	-12	NA	165889701	165912855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.57	chr2	+	5276	19	ISM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	55816	1778	535	-6	3prime_fragment	FALSE	canonical	3	140	junction_15	41.1852184918597	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	5538	False	NA	10	True	ATTAAA	-16	NA	165890372	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.58	chr2	+	5174	18	ISM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	57427	1779	2146	-7	3prime_fragment	FALSE	canonical	3	140	junction_14	42.3151792441397	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTAGCCCACTCAT	7149	False	NA	9	True	ATTAAA	-15	NA	165891983	165913383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.61	chr2	+	4724	15	ISM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	59717	1774	4436	-2	3prime_fragment	FALSE	canonical	3	140	junction_11	46.4398337988553	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	9439	False	NA	14	True	ATTAAA	-20	NA	165894273	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.62	chr2	+	4581	14	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	60116	2	4834	-2	3prime_fragment	FALSE	canonical	3	143	junction_10	46.7964242805344	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	9837	False	NA	14	True	ATTAAA	-20	NA	165894671	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.63	chr2	+	4262	13	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-6381	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	82.9467700797726	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165896358	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902688_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.64	chr2	+	3526	12	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	62130	535	-6054	-535	3prime_fragment	FALSE	canonical	3	143	junction_8	48.3234624669362	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTCCTGCACTC	NA	False	NA	12	True	AATAAA	-12	NA	165896685	165912855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.65	chr2	+	6034	8	NIC	ENSMUSG00000027678.18	novel	7531	23	NA	NA	-3733	-7	intron_retention	FALSE	canonical	3	211	junction_3	38.5687829780532	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTAGCCCACTCAT	NA	False	NA	9	True	ATTAAA	-15	NA	165899006	165913383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165911300_165911730_165911873_165912051
ES.20757.66	chr2	+	2330	9	ISM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	66526	2308	-1657	-536	3prime_fragment	FALSE	canonical	3	140	junction_5	56.7338908854311	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCCAGGTCCTGCACT	295	False	NA	11	True	AATAAA	-11	NA	165901082	165912854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.67	chr2	+	2857	9	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	66527	6	-1657	-6	3prime_fragment	FALSE	canonical	3	143	junction_5	55.9464029227975	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	295	False	NA	10	True	ATTAAA	-16	NA	165901082	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.68	chr2	+	2776	6	ISM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	72063	534	-2731	-534	3prime_fragment	FALSE	canonical	3	143	junction_2	66.2558676646831	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCAGGTCCTGCACTCT	5831	False	NA	13	True	AATAAA	-13	NA	165906618	165912856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.69	chr2	+	3038	5	FSM	ENSMUSG00000027678.18	ENSMUST00000139394.2	822	5	-952	-1264	-952	-6	multi-exon	FALSE	canonical	3	140	junction_1	74.5364843549788	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	7610	False	NA	10	True	ATTAAA	-16	NA	165908397	165913384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.7	chr2	+	5859	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.8555845288313	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCCCACTCATCATTT	NA	False	NA	14	True	ATTAAA	-20	NA	165834533	165913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876842_165889375_165889481_165889702_165889876_165890374_165890476_165891567_165891692_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.8	chr2	+	5124	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-21	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	90.4687436233025	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCCAGGTCCTGCACT	NA	False	NA	11	True	AATAAA	-11	NA	165834534	165912854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891157_165891238_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20757.9	chr2	+	5684	24	NNC	ENSMUSG00000027678.18	novel	5757	23	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	99.1138430050833	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTGTAGCCCACTCA	NA	False	NA	8	True	ATTAAA	-14	NA	165834534	165913382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891567_165891692_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901281_165901396_165901614_165901742_165902688_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ES.20758.1	chr2	-	4668	23	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCGCGGCGCGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	165912542	165834556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165834631_165876799_165876881_165889372_165889480_165889701_165889876_165890373_165890470_165891980_165892159_165893229_165893416_165893531_165893627_165894273_165894414_165894671_165894820_165896199_165896573_165896684_165897558_165899006_165899137_165900559_165900756_165901280_165901401_165901618_165901743_165902679_165902847_165907675_165907969_165909478_165909562_165910245_165910468_165911124_165911297_165911727_165911871_165912049
ES.20758.10	chr2	-	4780	22	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGGATAAAAGAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	165912542	165876804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165876881_165889372_165889480_165889701_165889874_165890372_165890470_165891980_165892159_165893229_165893414_165893533_165893626_165894273_165894414_165894671_165894820_165896199_165896578_165896690_165897555_165899006_165899137_165900559_165900756_165901082_165901401_165901618_165901739_165902673_165902848_165907677_165907969_165909478_165909563_165910245_165910468_165911123_165911299_165911729_165911871_165912049
ES.20758.11	chr2	-	193	1	Intergenic	novelGene_17161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCAAAAGTATTATACT	1339	False	NA	NA	False	NA	NA	NA	165899589	165899396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165899400_165899600
ES.20758.12	chr2	-	1789	9	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTTGCTGCAACGA	NA	False	NA	NA	False	NA	NA	NA	165912542	165901312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165901401_165901618_165901739_165902673_165902848_165907677_165907969_165909478_165909564_165910245_165910468_165911123_165911299_165911729_165911871_165912049
ES.20758.13	chr2	-	176	1	Intergenic	novelGene_17162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	165907368	165907192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165907200_165907400
ES.20758.15	chr2	-	1600	1	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCCAGGGCACCGTGG	NA	False	NA	NA	False	NA	NA	NA	165912543	165910943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165910900_165912500
ES.20758.16	chr2	-	2270	3	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165913846	165910966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165911299_165911729_165911871_165912049
ES.20758.2	chr2	-	5143	2	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCTTCGCATTTGGGA	895	False	NA	NA	False	NA	NA	NA	165840923	165835724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_165837585_165837640
ES.20758.3	chr2	-	5200	1	Intergenic	novelGene_17154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCTTCGCATTTGGGA	894	False	NA	NA	False	NA	NA	NA	165840924	165835724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165835700_165840900
ES.20758.4	chr2	-	1636	1	Intergenic	novelGene_17155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTTAAAGGGCATT	894	False	NA	NA	False	NA	NA	NA	165840924	165839288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165839300_165840900
ES.20758.5	chr2	-	1222	1	Intergenic	novelGene_17156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAC	894	False	NA	NA	False	NA	NA	NA	165840924	165839702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165839700_165840900
ES.20758.6	chr2	-	2278	1	Intergenic	novelGene_17157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7792	False	NA	NA	False	NA	NA	NA	165853815	165851537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165851500_165853800
ES.20758.7	chr2	-	1795	1	Intergenic	novelGene_17158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAGAAGGGGAGAAAGA	6672	False	NA	NA	False	NA	NA	NA	165854935	165853140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165853100_165854900
ES.20758.8	chr2	-	177	1	Intergenic	novelGene_17159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAAGTGCTTT	6961	False	NA	NA	False	NA	NA	NA	165854646	165854469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165854500_165854600
ES.20758.9	chr2	-	159	1	Intergenic	novelGene_17160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8889	False	NA	NA	False	NA	NA	NA	165870850	165870691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_165870700_165870800
ES.20759.1	chr2	+	1201	1	ISM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	79405	0	4612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCGCATGCTTTTCCT	NA	False	NA	31	True	AATAAA	-19	NA	165913961	165915162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_165914000_165915200
ES.2076.1	chr1	+	2319	1	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	3976	False	NA	NA	False	NA	NA	NA	181039594	181041913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181039600_181041900
ES.20760.1	chr2	+	2700	15	Antisense	novelGene_ENSMUSG00000006800.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGCCTTGTCTTGTTCAT	1839	False	NA	NA	False	NA	NA	NA	165920433	165958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165921102_165921379_165921549_165921935_165921997_165922716_165922812_165923206_165923301_165923394_165923629_165924495_165924707_165925777_165925906_165926305_165926361_165927600_165927731_165928904_165929082_165931117_165931272_165935377_165935539_165936392_165936550_165958791
ES.20760.2	chr2	+	866	5	Antisense	novelGene_ENSMUSG00000006800.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGTTGCCCAGACATGG	NA	False	NA	NA	False	NA	NA	NA	165935469	165997547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165935539_165936392_165936550_165958791_165959031_165974506_165974775_165997414
ES.20760.3	chr2	+	320	1	Intergenic	novelGene_17163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCTCGCAGGAATGCA	NA	False	NA	NA	False	AATAAA	-6	NA	165968050	165968370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_165968000_165968400
ES.20760.4	chr2	+	397	2	Antisense	novelGene_ENSMUSG00000006800.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTGTGCATGTTTGTG	992	False	NA	NA	False	TATAAA	-27	NA	165984367	165989671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165984500_165989406
ES.20760.5	chr2	+	1409	1	Antisense	novelGene_ENSMUSG00000006800.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGGGCTCGCCCTGGTTT	3207	False	NA	NA	False	AATAAA	-22	NA	165995927	165997336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_165995900_165997300
ES.20761.1	chr2	-	4642	2	NNC	ENSMUSG00000006800.15	novel	450	3	NA	NA	902	568	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGTACTGGAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	165919137	165914440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165918841_165918895
ES.20761.10	chr2	-	4332	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-569	817	-569	8	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTTTTTGCTCTTTATT	NA	False	NA	-2	True	NA	NA	NA	165998152	165915825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.100	chr2	-	2488	15	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-9023	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.213760664471	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATCCCTTGAGCTTTCA	NA	False	NA	-34	True	AATAAA	-20	NA	165929062	165916070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917599_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905
ES.20761.102	chr2	-	3385	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-649	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	203.951336107416	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAATCCCTTGAGCTT	NA	False	NA	-37	True	AATAAA	-17	NA	165998232	165916073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165998201
ES.20761.103	chr2	-	3688	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-174	1066	-174	-235	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATAATCCCTTGAGCT	NA	False	NA	-38	True	AATAAA	-16	NA	165997757	165916074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.104	chr2	-	3718	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-28	237	-28	-237	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGATAATCCCTTGAG	NA	False	NA	-40	True	AATAAA	-14	NA	165997233	165916076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.105	chr2	-	3284	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	282	361	-197	-361	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGCCTTCACCACATA	NA	False	NA	NA	False	AAAACA	-37	NA	165996923	165916200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.106	chr2	-	3120	20	ISM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	4	2132	4	-406	5prime_fragment	FALSE	canonical	0	0	junction_19	208.011945640355	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATAAGTTGCTGTTCTC	NA	False	NA	NA	False	AATACA	-23	NA	165997579	165917140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.107	chr2	-	3322	20	ISM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-21	1302	-21	-407	5prime_fragment	FALSE	canonical	3	542	junction_19	100.141423542614	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCATAAGTTGCTGTTCT	NA	False	NA	NA	False	AATACA	-22	NA	165997226	165917141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.109	chr2	-	5577	17	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-43	-1504	intron_retention	FALSE	canonical	3	542	junction_16	94.177504446391	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACCTGACTCTCAAGTG	NA	False	NA	NA	False	AATAAA	-32	NA	165997248	165918238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.11	chr2	-	7076	19	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	135	3	intron_retention	FALSE	non_canonical	0	0	junction_2	215.972191854232	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165997070	165915830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165918841_165918895_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.110	chr2	-	3862	17	ISM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	60	4011	60	-3116	5prime_fragment	FALSE	canonical	3	542	junction_16	94.177504446391	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACCCAGTGGGCAGCTG	NA	False	NA	NA	False	AATAAA	-26	NA	165997145	165919850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.111	chr2	-	3768	17	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-58	-3118	combination_of_known_junctions	FALSE	canonical	3	105	junction_16	191.93516971884	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGACCCAGTGGGCAGC	NA	False	NA	NA	False	AATAAA	-24	NA	165996784	165919852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
ES.20761.112	chr2	-	3574	17	ISM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	68	4944	68	-3218	5prime_fragment	FALSE	canonical	0	0	junction_16	216.550432564218	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGGTCCTAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	165997515	165919952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.113	chr2	-	3671	17	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	16	-3220	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_16	198.947543337434	1467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGAGGTCCTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	165997189	165919954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996997
ES.20761.114	chr2	-	3559	17	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-216	-3220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	225.336831210524	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGAGGTCCTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	165996942	165919954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924489_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.116	chr2	-	1587	2	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-2369	-3700	intron_retention	FALSE	canonical	3	857	junction_1	0	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCGACACAGCTCCATACA	NA	False	NA	NA	False	NA	NA	NA	165922408	165920434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165921550_165921936
ES.20761.117	chr2	-	5722	5	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	142	4757	intron_retention	FALSE	canonical	3	542	junction_4	169.118856133785	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	165997063	165930678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.118	chr2	-	2205	3	ISM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	118	41475	118	17198	5prime_fragment	FALSE	canonical	3	542	junction_2	196.5	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGAATAGTGAGGCCCC	NA	False	NA	NA	False	NA	NA	NA	165997087	165957314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_165959032_165974507_165974775_165996866
ES.20761.12	chr2	-	4031	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	152	3	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_20	188.49392563157	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGACTTTTTTGCTCT	NA	False	NA	-7	True	NA	NA	NA	165997431	165915830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996997
ES.20761.13	chr2	-	3874	21	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-149	2	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	182.354352840836	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGACTTTTTTGCTC	NA	False	NA	-8	True	NA	NA	NA	165996875	165915831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
ES.20761.14	chr2	-	3459	20	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-58	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	208.161387953922	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGACTTTTTTGCTC	NA	False	NA	-8	True	NA	NA	NA	165996784	165915831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165996654
ES.20761.15	chr2	-	3837	22	NNC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	11816	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	256.956157972876	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGACTTTTTTGCTC	9209	False	NA	-8	True	NA	NA	NA	165984527	165915831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165984339
ES.20761.16	chr2	-	5735	20	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	191	2	intron_retention	FALSE	canonical	3	15	junction_19	267.572787622173	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGACTTTTTTGCTC	NA	False	NA	-8	True	NA	NA	NA	165997014	165915831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
ES.20761.17	chr2	-	3296	18	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	231.80608767618	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997225	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923463_165927698_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.18	chr2	-	3815	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	-38	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_21	256.508962947813	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996764	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996597
ES.20761.20	chr2	-	3754	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-87	1	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_20	191.779143808705	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996813	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996654
ES.20761.22	chr2	-	4429	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-225	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	214.305500396047	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996951	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165928481_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.23	chr2	-	4065	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	187	1	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	217.647533304337	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997396	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.24	chr2	-	4076	22	FSM	ENSMUSG00000006800.15	ENSMUST00000146497.9	3808	22	-267	-1	-267	1	multi-exon	FALSE	canonical	0	0	junction_21	257.404161765755	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997850	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165997422
ES.20761.25	chr2	-	3761	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	179	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	213.965628080774	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997026	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931275_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.26	chr2	-	3774	22	NNC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	-2561	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	257.404161765755	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	166000144	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_166000018
ES.20761.27	chr2	-	4779	20	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-180	1	intron_retention	FALSE	canonical	0	0	junction_13	219.002118660618	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996906	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165928481_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.28	chr2	-	3727	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-2567	1	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_20	197.544931597852	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	166000150	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_166000018
ES.20761.29	chr2	-	4003	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-170	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.198351124904	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997375	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916524_165916624_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.3	chr2	-	6562	20	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	201	539	intron_retention	FALSE	non_canonical	0	0	junction_12	219.087796565391	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-31	NA	165997004	165914469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926707_165926875_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.30	chr2	-	5353	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	238	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	214.127829812007	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996967	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165918841_165918895_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.31	chr2	-	3549	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	118	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	208.161387953922	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997087	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165996866
ES.20761.34	chr2	-	4324	20	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-173	1	intron_retention	FALSE	canonical	0	0	junction_19	208.644723150659	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997756	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.35	chr2	-	4076	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.264152519415	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165997248	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919148_165919248_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.37	chr2	-	3576	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	238	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	209.198351124904	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGGACTTTTTTGCT	NA	False	NA	-9	True	NA	NA	NA	165996967	165915832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165958891_165959010_165959032_165974507_165974775_165996866
ES.20761.38	chr2	-	3645	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	213.011408145198	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165996995	165915833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959009_165974562_165974775_165996866
ES.20761.39	chr2	-	3871	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	140	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	210.087571026941	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997065	165915833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917547_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.4	chr2	-	4839	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-78	-834	-78	3	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTCAGTGGTGTCGG	NA	False	NA	NA	False	TATAAA	-17	NA	165997283	165915005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.40	chr2	-	3730	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	238	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	213.966960066268	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165996967	165915833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923662_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.41	chr2	-	4222	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	106	0	intron_retention	FALSE	canonical	3	542	junction_19	101.019183060745	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997099	165915833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.43	chr2	-	3717	21	NNC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	10431	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	203.951336107416	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	7824	False	NA	-10	True	NA	NA	NA	165985912	165915833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165985789
ES.20761.44	chr2	-	3830	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	104	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.275546901647	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997101	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921546_165921930_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.45	chr2	-	3743	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	135	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	213.67888248478	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997070	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.46	chr2	-	3785	21	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-113	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_20	192.6015576261	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165996456	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996264
ES.20761.48	chr2	-	4722	20	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-101	-1	intron_retention	FALSE	canonical	0	0	junction_19	209.009840853026	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997684	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.49	chr2	-	3980	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	232	-1	intron_retention	FALSE	canonical	3	542	junction_19	101.289880487622	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165996973	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.5	chr2	-	4564	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	-232	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCAGTGGTGT	NA	False	NA	NA	False	TATAAA	-14	NA	165996958	165915008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
ES.20761.50	chr2	-	3783	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	202.709613733538	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997249	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974713_165996997
ES.20761.51	chr2	-	3777	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	218.941346071021	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997201	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.52	chr2	-	4473	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	135	-1	intron_retention	FALSE	canonical	3	542	junction_19	100.141423542614	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	NA	False	NA	-11	True	NA	NA	NA	165997070	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.53	chr2	-	4128	18	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	21653	-1	intron_retention	FALSE	canonical	0	0	junction_11	219.408326735405	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTGGGACTTTTTTG	8409	False	NA	-11	True	NA	NA	NA	165974690	165915834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507
ES.20761.55	chr2	-	3795	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	213.980811055571	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997149	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921984_165922783_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.56	chr2	-	3920	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	210.087571026941	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997204	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917459_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.57	chr2	-	5927	19	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-67	-2	intron_retention	FALSE	canonical	0	0	junction_18	214.212115079688	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997650	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.58	chr2	-	5263	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	190	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	213.934546064912	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997015	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165919248_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.59	chr2	-	5066	17	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-16439	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	225.848184282606	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165936478	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165918841_165918895_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397
ES.20761.6	chr2	-	5303	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	129	-2	intron_retention	FALSE	canonical	3	542	junction_19	100.141423542614	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTTCTCAGTGGT	NA	False	NA	NA	False	TATAAA	-12	NA	165997076	165915010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.60	chr2	-	2779	18	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-16458	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.601468604684	1288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165936497	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916485_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397
ES.20761.61	chr2	-	3818	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.264152519415	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997048	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919203_165919248_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.62	chr2	-	3396	20	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	28366	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	208.161387953922	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	9035	False	NA	-12	True	NA	NA	NA	165967977	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165967906
ES.20761.63	chr2	-	3757	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	209.198351124904	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997157	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165958885_165959010_165959032_165974507_165974775_165996866
ES.20761.64	chr2	-	3453	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	238	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_18	217.511498724923	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165996967	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165974507_165974775_165996866
ES.20761.65	chr2	-	3826	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	93	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	213.966960066268	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997112	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923619_165924497_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.66	chr2	-	3703	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	238	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	277.360884048202	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165996967	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923204_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959040_165974507_165974775_165996866
ES.20761.67	chr2	-	3711	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	11755	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	203.951336107416	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	9148	False	NA	-12	True	NA	NA	NA	165984588	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165984469
ES.20761.68	chr2	-	4008	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-53	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	212.851708943104	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997258	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916763_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.69	chr2	-	3656	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-210	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	214.127829812007	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165996936	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919443_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.7	chr2	-	3914	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	143	-130	143	124	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGGGACCTCATAGGTA	NA	False	NA	NA	False	AGTAAA	-10	NA	165997062	165915709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.70	chr2	-	4700	20	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	75	junction_19	193.17493112881	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATCTTGGGACTTTTTT	NA	False	NA	-12	True	NA	NA	NA	165997238	165915835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996997
ES.20761.71	chr2	-	3912	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	272.852912790281	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165997110	165915839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165918124_165918205_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.74	chr2	-	3876	22	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	142	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	273.899935383663	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165997063	165915839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165926437_165926529_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.76	chr2	-	3987	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	210.087571026941	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165997135	165915839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917599_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.77	chr2	-	3735	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	278.507499899015	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165997044	165915839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921988_165922723_165922797_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.78	chr2	-	3678	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-562	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	203.951336107416	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165998145	165915839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165998055
ES.20761.79	chr2	-	3703	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.635272592298	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGCTATCTTGGGACT	NA	False	NA	-17	True	NA	NA	NA	165996781	165915840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916728_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996654
ES.20761.8	chr2	-	4044	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	-17	41	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAGCACTCAAGATGT	NA	False	NA	31	True	NA	NA	NA	165997222	165915792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
ES.20761.81	chr2	-	3609	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	135	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	213.966960066268	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGCTATCTTGGGACT	NA	False	NA	-17	True	NA	NA	NA	165997070	165915840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923577_165924625_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.83	chr2	-	3765	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	309.795755296938	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGCTATCTTGGGACT	NA	False	NA	-17	True	NA	NA	NA	165996764	165915840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924489_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936390_165936550_165958791_165959032_165974507_165974775_165996597
ES.20761.86	chr2	-	5679	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	542	junction_19	101.465221311216	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGGCTATCTTGGGAC	NA	False	NA	-18	True	NA	NA	NA	165997247	165915841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.87	chr2	-	3431	17	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-170	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	238.871533203519	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGGCTATCTTGGGAC	NA	False	NA	-18	True	NA	NA	NA	165997375	165915841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923486_165928901_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.89	chr2	-	3972	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-179	134	-179	-134	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGATGTGTGTCCTGTG	NA	False	NA	63	True	NA	NA	NA	165997384	165915973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.9	chr2	-	4182	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	-239	-16	139	10	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTGCTCTTTATTAT	NA	False	NA	0	True	NA	NA	NA	165997444	165915823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.90	chr2	-	3567	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-41	-134	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_20	191.779143808705	1490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGATGTGTGTCCTGTG	NA	False	NA	63	True	NA	NA	NA	165996767	165915973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996654
ES.20761.91	chr2	-	3682	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	-67	965	-67	-134	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGATGTGTGTCCTGTG	NA	False	NA	63	True	NA	NA	NA	165997650	165915973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ES.20761.92	chr2	-	3638	21	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-55	-134	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	182.354352840836	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGATGTGTGTCCTGTG	NA	False	NA	63	True	NA	NA	NA	165996781	165915973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
ES.20761.93	chr2	-	4916	1	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-920	-204	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCCCGGGATTCGTT	NA	False	NA	-7	True	NA	NA	NA	165920959	165916043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916000_165921000
ES.20761.94	chr2	-	3342	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-225	-226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.225807169339	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGAGCTTTCAGACAT	NA	False	NA	-29	True	AATAAA	-25	NA	165996951	165916065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919505_165921004_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20761.95	chr2	-	3544	21	NNC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-38	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	255.83949558268	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTTGAGCTTTCAGAC	NA	False	NA	-31	True	AATAAA	-23	NA	165996764	165916067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919579_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
ES.20761.96	chr2	-	3621	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	131	-228	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTTGAGCTTTCAGAC	NA	False	NA	-31	True	AATAAA	-23	NA	165997074	165916067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
ES.20761.98	chr2	-	3533	22	NNC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	-2701	-229	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	263.719169673945	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCTTGAGCTTTCAGA	NA	False	NA	-32	True	AATAAA	-22	NA	166000284	165916068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_166000018_166000145_166000236
ES.20761.99	chr2	-	4199	21	NNC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	-232	-230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	214.305500396047	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCCTTGAGCTTTCAG	NA	False	NA	-33	True	AATAAA	-21	NA	165996958	165916069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165928481_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ES.20762.1	chr2	-	1614	4	NNC	ENSMUSG00000085618.2	novel	291	2	NA	NA	-1320	6200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCACGG	NA	False	NA	NA	False	NA	NA	NA	166034102	166025512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166026651_166027250_166027517_166031712_166031832_166034011
ES.20763.1	chr2	+	3738	5	Intergenic	novelGene_17164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTCGGATTAATCCTTC	654	False	NA	NA	False	TATAAA	-15	NA	166036169	166043347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166036294_166036551_166036667_166037012_166037181_166038145_166038309_166040179
ES.20763.2	chr2	+	3760	4	Intergenic	novelGene_17165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGACTGCTATTTTGCTT	684	False	NA	NA	False	TTTAAA	-3	NA	166036199	166041501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166036321_166036551_166036667_166037012_166037181_166038145
ES.20763.3	chr2	+	7732	2	Intergenic	novelGene_17166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGTTCCTGTCCTGACTT	1387	False	NA	NA	False	NA	NA	NA	166036902	166045360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166037181_166037906
ES.20764.1	chr2	-	6007	2	Intergenic	novelGene_17167	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTTGGTCATAGTGTC	NA	False	NA	-2	True	NA	NA	NA	166100529	166094480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166096203_166096244
ES.20764.2	chr2	-	2079	2	Intergenic	novelGene_17169	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCTTGGTCATAG	NA	False	NA	-6	True	NA	NA	NA	166096607	166094484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166096201_166096244
ES.20764.3	chr2	-	2150	1	Intergenic	novelGene_17171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCTTGGTCATAG	NA	False	NA	-6	True	NA	NA	NA	166096634	166094484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166094500_166096600
ES.20764.4	chr2	-	1616	2	Intergenic	novelGene_17170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCTTGGTCATAG	NA	False	NA	-6	True	NA	NA	NA	166096615	166094484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166095994_166096508
ES.20764.5	chr2	-	1180	2	Intergenic	novelGene_17168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCTTGGTCATAG	NA	False	NA	-6	True	NA	NA	NA	166096599	166094484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166095574_166096508
ES.20764.6	chr2	-	3299	3	Intergenic	novelGene_17172	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACCTTGGTCGTGATG	NA	False	NA	NA	False	NA	NA	NA	166099698	166095883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166096199_166096244_166098796_166099265
ES.20765.1	chr2	+	3248	2	Intergenic	novelGene_17173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGCTGCTGTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	166109156	166113019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166111568_166112182
ES.20765.2	chr2	+	3760	1	Intergenic	novelGene_17174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTGCTGCTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	166109257	166113017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166109300_166113000
ES.20766.1	chr2	-	159	1	Intergenic	novelGene_17175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	166199200	166199041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166199000_166199200
ES.20767.1	chr2	-	143	1	Intergenic	novelGene_17176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATCTCGGGGCTTGCTG	7661	False	NA	NA	False	NA	NA	NA	166245053	166244910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166244900_166245100
ES.20768.1	chr2	+	4794	3	Intergenic	novelGene_17177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGGGGTTTGTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	166245458	166251168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166246327_166246723_166248946_166249464
ES.20769.1	chr2	+	715	1	Intergenic	novelGene_17178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166338173	166338888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166338200_166338900
ES.2077.1	chr1	-	6167	13	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2317	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.08719985648	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTGCGTTCCATCTC	NA	False	NA	-1	True	AATAAA	-21	NA	181036674	181000790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008044_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615
ES.2077.10	chr1	-	3195	3	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	7237	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTCTCGTTGCGTTCCA	NA	False	NA	-5	True	AATAAA	-17	NA	181004067	181000794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001375_181001418_181001680_181001713
ES.2077.12	chr1	-	6354	14	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	70	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	43.947251867956	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTCTCGTTGCGTTCC	NA	False	NA	-6	True	AATAAA	-16	NA	181038921	181000795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025279_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.13	chr1	-	6785	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	42.8588690128569	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAATTCTCGTTGCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	181039537	181000796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640_181038954_181039155
ES.2077.14	chr1	-	9479	14	NIC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	-162	0	intron_retention	FALSE	canonical	3	44	junction_1	42.1032824199319	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAATTCTCGTTGCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	181039164	181000796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.15	chr1	-	6996	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.8588690128569	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAATTCTCGTTGCGT	NA	False	NA	-9	True	AATAAA	-13	NA	181039582	181000798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001680_181001713_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.16	chr1	-	8554	5	NNC	ENSMUSG00000038733.15	novel	751	6	NA	NA	21	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	67.5629336248804	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAATTCTCGTTGCGT	5578	False	NA	-9	True	AATAAA	-13	NA	181011940	181000798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001680_181001715_181009055_181010333_181010464_181011291_181011371_181011815
ES.2077.17	chr1	-	4874	5	ISM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	27062	246	21	-246	3prime_fragment	FALSE	canonical	3	146	junction_4	6.94172168845741	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTATTTTCACTTGTTC	5578	False	NA	-1	True	ATTAAA	-21	NA	181011940	181001042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815
ES.2077.18	chr1	-	8657	14	NNC	ENSMUSG00000038733.15	novel	2640	14	NA	NA	6	-254	intron_retention	FALSE	canonical	1	1	junction_1	57.2912211745276	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCTCATATTTATTTTC	NA	False	NA	-9	True	ATTAAA	-13	NA	181039560	181001050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181002203_181003837_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030790_181036615_181036673_181036777_181036878_181038640
ES.2077.19	chr1	-	5486	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-876	1842	-312	-1842	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTATTAGTGGTAAAGT	NA	False	NA	2	True	ATTAAA	-22	NA	181039878	181002638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.2	chr1	-	6946	16	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	-16	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63.0130850608736	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTGCGTTCCATCTC	NA	False	NA	-1	True	AATAAA	-21	NA	181039582	181000790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001375_181001418_181001686_181001730_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019462_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.20	chr1	-	5193	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	2	1850	2	-1846	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGGTTATTAGTGGTA	NA	False	NA	-2	True	ATTAAA	-18	NA	181039541	181002642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.21	chr1	-	5550	1	NIC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	3109	-1849	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAACTGGTTATTAGTG	9323	False	NA	-5	True	ATTAAA	-15	NA	181008195	181002645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181002600_181008200
ES.2077.22	chr1	-	5124	14	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2	-1849	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	43.947251867956	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAACTGGTTATTAGTG	NA	False	NA	-5	True	ATTAAA	-15	NA	181039541	181002645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025279_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.23	chr1	-	4409	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	-10	2646	-10	1223	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039553	181003438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.24	chr1	-	4133	15	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	178	1223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	48.8097619041812	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039365	181003438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640_181038970_181039057
ES.2077.25	chr1	-	4385	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-575	2642	-11	1223	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039577	181003438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.26	chr1	-	4273	16	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	24	1223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.3131774701625	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039519	181003438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005417_181008085_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640_181038954_181039155
ES.2077.27	chr1	-	2847	14	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	26	1222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.6118309921524	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTAAGTGGCAACTC	NA	False	NA	-3	True	AATAAA	-20	NA	181039517	181003439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181003924_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015304_181019321_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.29	chr1	-	5004	1	NIC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	2861	1222	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTAAGTGGCAACTC	9075	False	NA	-3	True	AATAAA	-20	NA	181008443	181003439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181003400_181008400
ES.2077.3	chr1	-	7037	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-579	-6	-15	2	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTGCGTTCCATCTC	NA	False	NA	-1	True	AATAAA	-21	NA	181039581	181000790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.30	chr1	-	4032	15	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	179	1222	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	48.8097619041812	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTAAGTGGCAACTC	NA	False	NA	-3	True	AATAAA	-20	NA	181039364	181003439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640_181039108_181039294
ES.2077.31	chr1	-	2886	14	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	-9	1222	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	43.6909533917952	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTAAGTGGCAACTC	NA	False	NA	-3	True	AATAAA	-20	NA	181039552	181003439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181003924_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.33	chr1	-	4373	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2	1221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.6288066813957	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAATTAAGTGGCAACT	NA	False	NA	-4	True	AATAAA	-19	NA	181039541	181003440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181006237_181006282_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025279_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.34	chr1	-	3988	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2	1218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	42.8588690128569	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATATAATTAAGTGGCA	NA	False	NA	-7	True	AATAAA	-16	NA	181039541	181003443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640_181038837_181039192
ES.2077.36	chr1	-	3532	14	FSM	ENSMUSG00000038733.15	ENSMUST00000237749.2	7068	14	-347	3883	-347	-14	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTCATTTGTA	NA	False	NA	-34	True	AATAAA	-20	NA	181039913	181004675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.37	chr1	-	6584	13	NIC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	2	-14	intron_retention	FALSE	canonical	3	114	junction_10	18.7764628073435	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTCATTTGTA	NA	False	NA	-34	True	AATAAA	-20	NA	181039541	181004675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.38	chr1	-	3261	15	NIC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	35	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	48.3644750718913	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039508	181004676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181005397_181008030_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.39	chr1	-	3359	15	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	13	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.6082448755443	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039530	181004676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181006070_181006282_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.40	chr1	-	3318	15	NIC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	26	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	53.0844533142564	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039517	181004676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181005397_181008030_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.41	chr1	-	3201	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.9027946437349	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039546	181004676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181022201_181022287_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.42	chr1	-	3125	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-553	3880	11	-15	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGACTTCATTTGT	NA	False	NA	-35	True	AATAAA	-19	NA	181039555	181004676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.43	chr1	-	3087	15	NNC	ENSMUSG00000038733.15	novel	7068	14	NA	NA	-8	-21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	48.8097619041812	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGATTAAAGTGACTTC	NA	False	NA	-41	True	AATAAA	-13	NA	181039551	181004682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640_181038850_181038925
ES.2077.44	chr1	-	6378	13	NIC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	2	246	intron_retention	FALSE	canonical	0	0	junction_10	45.5372253095079	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTTAACAGTTTAGAA	NA	False	NA	NA	False	AATGAA	-22	NA	181039541	181004993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030790_181036567_181036673_181036777_181036878_181038640
ES.2077.45	chr1	-	2547	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-541	4446	0	-3	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATTTTGAAGCCCGAT	NA	False	NA	NA	False	NA	NA	NA	181039543	181005242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.46	chr1	-	2576	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	2	4467	2	-20	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	181039541	181005259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.47	chr1	-	2678	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	42.1032824199319	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTACAGATTGTTTTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	181039537	181007970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.48	chr1	-	2691	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	50.4573168965847	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTACAGATTGTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	181039537	181007973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030790_181036615_181036673_181036777_181036878_181038640
ES.2077.50	chr1	-	2607	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	34.0406996222056	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTACAGATTGTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	181039517	181007973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.51	chr1	-	2141	14	NNC	ENSMUSG00000038733.15	novel	751	6	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.2994712935391	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTACAGATTGTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	181039058	181007973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013626_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.53	chr1	-	2485	13	NNC	ENSMUSG00000038733.15	novel	751	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	52.8805651129663	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAATGACTTACAGATT	NA	False	NA	NA	False	AGTAAA	-15	NA	181039541	181007977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019480_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.2077.54	chr1	-	1396	3	ISM	ENSMUSG00000038733.15	ENSMUST00000036329.12	2640	14	-550	31616	2	-9971	5prime_fragment	FALSE	canonical	3	127	junction_2	23.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATACTCACTGTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	181039541	181036277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181036673_181036777_181036878_181038640
ES.2077.7	chr1	-	7053	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	-8	0	-8	0	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTTGCGTTCCATC	NA	False	NA	-3	True	AATAAA	-19	NA	181039551	181000792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ES.2077.8	chr1	-	6082	2	NNC	ENSMUSG00000038733.15	novel	7045	14	NA	NA	4388	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCGTTGCGTTCCATC	NA	False	NA	-3	True	AATAAA	-19	NA	181006916	181000792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001377_181001418
ES.2077.9	chr1	-	6924	15	NNC	ENSMUSG00000038733.15	novel	6452	14	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.8588690128569	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTCGTTGCGTTCCAT	NA	False	NA	-4	True	AATAAA	-18	NA	181039515	181000793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181001375_181001418_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ES.20770.1	chr2	-	3211	6	NNC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	-2794	1	intron_retention	FALSE	canonical	0	0	junction_5	13.2272446110292	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTGACTTTTTGTTG	NA	False	NA	0	True	AATAAA	-18	NA	166354580	166341954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166354384
ES.20770.10	chr2	-	3117	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	64	-17	intron_retention	FALSE	canonical	0	0	junction_5	6.71118469422501	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349927	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166347371_166347507_166347939_166348119_166348706_166348871_166349381_166349480_166349807
ES.20770.11	chr2	-	4194	1	FSM	ENSMUSG00000085682.3	ENSMUST00000119751.2	496	1	-3483	-215	-591	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166346171	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166342000_166346200
ES.20770.12	chr2	-	6627	3	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	28	-17	intron_retention	FALSE	canonical	2	6	junction_2	14	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349963	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166348871_166349381
ES.20770.13	chr2	-	3021	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	11	-17	intron_retention	FALSE	canonical	0	0	junction_5	13.2272446110292	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166351061	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166351032
ES.20770.14	chr2	-	3801	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	61	-17	intron_retention	FALSE	canonical	0	0	junction_5	14.4499134945508	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349930	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348871_166349381_166349480_166349807
ES.20770.15	chr2	-	5631	5	NNC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	111	-17	intron_retention	FALSE	canonical	0	0	junction_4	12.852528934027	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349880	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166344399_166345246_166348119_166348706_166348871_166349381_166349483_166349807
ES.20770.16	chr2	-	2972	5	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	25	-17	intron_retention	FALSE	canonical	0	0	junction_3	15.1244834622542	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349966	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166348706_166348871_166349807
ES.20770.17	chr2	-	2746	5	NNC	ENSMUSG00000085682.3	novel	1299	6	NA	NA	-683	-17	intron_retention	FALSE	canonical	0	0	junction_2	14.7224318643355	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166364976	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166344399_166345246_166345340_166360517_166360606_166364148_166364198_166364881
ES.20770.19	chr2	-	579	5	NNC	ENSMUSG00000085682.3	novel	604	3	NA	NA	77	491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5666571319572	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTGCTTTTTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	166349914	166343134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166343267_166344286_166344399_166345246_166345340_166347371_166347507_166349807
ES.20770.2	chr2	-	3170	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	12	junction_5	9.90757286120067	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349963	166341955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349807
ES.20770.20	chr2	-	6747	1	NIC	ENSMUSG00000085682.3	novel	1209	5	NA	NA	110	491	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTGCTTTTTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	166349881	166343134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166343100_166349900
ES.20770.21	chr2	-	2542	1	NIC	ENSMUSG00000085682.3	novel	1299	6	NA	NA	-2391	-14115	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCATGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	166360677	166358135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166358100_166360700
ES.20770.3	chr2	-	3180	6	NNC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_3	13.7054733592095	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349963	166341955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347929_166348119_166348706_166348871_166349807
ES.20770.4	chr2	-	2827	4	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	17	junction_3	8.52447456836295	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349963	166341955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166349807
ES.20770.5	chr2	-	4492	4	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	76	0	intron_retention	FALSE	canonical	3	15	junction_3	9.46337971105226	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349915	166341955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166345246_166345340_166347371_166348119_166348706
ES.20770.6	chr2	-	2651	3	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	89	-17	intron_retention	FALSE	canonical	3	12	junction_1	2.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349902	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166347371_166347507_166349807
ES.20770.7	chr2	-	3011	5	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	72	-17	intron_retention	FALSE	canonical	3	12	junction_1	2.87228132326901	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349919	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166344399_166347371_166347507_166347939_166348119_166348706_166348871_166349807
ES.20770.8	chr2	-	1728	5	NNC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	81	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.1950695665784	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349910	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166343267_166344290_166344399_166345246_166345340_166347371_166347507_166349807
ES.20770.9	chr2	-	4795	3	FSM	ENSMUSG00000085682.3	ENSMUST00000123480.2	604	3	-2148	-2043	339	-17	multi-exon	FALSE	canonical	3	34	junction_1	1	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTAAAAAACCC	NA	False	NA	-23	True	AATAAA	-27	NA	166349652	166341977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166344399_166345246_166345340_166347371
ES.20771.1	chr2	+	1673	1	Antisense	novelGene_ENSMUSG00000039621.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAACAGAAACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	166434850	166436523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_166434800_166436500
ES.20772.1	chr2	+	3008	4	Antisense	novelGene_ENSMUSG00000039621.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTTGTCTGTACTT	554	False	NA	NA	False	NA	NA	NA	166542272	166547202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_166542682_166543441_166543555_166543749_166543961_166544927
ES.20773.10	chr2	-	5724	39	NIC	ENSMUSG00000039621.14	novel	6533	40	NA	NA	-11	-26	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	11.1376740809524	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAGGAACTAAA	NA	False	NA	NA	False	CATAAA	-32	NA	166555722	166408911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20773.11	chr2	-	5686	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	18	829	18	-205	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTTTATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	166555734	166409090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20773.12	chr2	-	844	3	FSM	ENSMUSG00000039621.14	ENSMUST00000140624.2	437	3	-192	-215	-3	2	multi-exon	FALSE	canonical	3	56	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166555714	166486299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166486792_166488893_166488966_166555434
ES.20773.13	chr2	-	3043	1	Genic_Genomic	ENSMUSG00000039621.14	novel	NA	NA	NA	NA	-1175	-57132	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGGTGACACCTCGGC	NA	False	NA	NA	False	NA	NA	NA	166546689	166543646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_166543600_166546700
ES.20773.2	chr2	-	6542	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	-9	0	-9	0	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGTGGCCTGCTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	166555761	166408261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20773.5	chr2	-	6549	40	NNC	ENSMUSG00000039621.14	novel	6533	40	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.1409002382957	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGTGGCCTGCTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	166555739	166408261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166415003_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20773.8	chr2	-	5907	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	2	624	2	0	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTTAAGAGGTCATT	NA	False	NA	NA	False	ACTAAA	-24	NA	166555750	166408885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20773.9	chr2	-	5858	40	NNC	ENSMUSG00000039621.14	novel	6533	40	NA	NA	19	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.9285528587784	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAGGAACTAAA	NA	False	NA	NA	False	CATAAA	-32	NA	166555733	166408911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427658_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ES.20774.1	chr2	+	164	1	Intergenic	novelGene_17180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGAGCGGGTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	166580263	166580427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166580300_166580400
ES.20775.1	chr2	-	2593	2	Intergenic	novelGene_17179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAATTTCATATTGT	NA	False	NA	NA	False	NA	NA	NA	166588559	166579598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166581979_166588346
ES.20776.1	chr2	-	254	1	Intergenic	novelGene_17181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCCTGTCTAGGAAGA	NA	False	NA	37	True	NA	NA	NA	166591199	166590945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166590900_166591200
ES.20777.1	chr2	-	178	1	Intergenic	novelGene_17182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7585	False	NA	NA	False	NA	NA	NA	166596109	166595931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166595900_166596100
ES.20778.1	chr2	-	135	1	Intergenic	novelGene_17183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAACAACAACAAA	2654	False	NA	NA	False	NA	NA	NA	166601040	166600905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166600900_166601000
ES.20779.1	chr2	-	131	1	Intergenic	novelGene_17184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166614167	166614036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166614000_166614200
ES.2078.1	chr1	+	174	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	38	False	NA	NA	False	NA	NA	NA	181051295	181051469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181051300_181051500
ES.20780.1	chr2	+	1153	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	1	3272	1	318	multi-exon	FALSE	canonical	3	131	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCTGGATCTGTGTTG	NA	False	NA	83	True	NA	NA	NA	166635687	166638153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166635989_166637301
ES.20780.100	chr2	+	6109	11	NIC	ENSMUSG00000002718.15	novel	3087	24	NA	NA	-3	698	intron_retention	FALSE	canonical	3	791	junction_10	56.088858073596	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCATCATCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	166747956	166775021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166772587_166774052
ES.20780.101	chr2	+	4545	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_18	189.715734501267	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGTGGTTTTTATTGT	NA	False	NA	33	True	CATAAA	-29	NA	166747956	166788305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.102	chr2	+	5086	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	-1424	-2	1424	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACTGCTTCGTTCCCA	NA	False	NA	NA	False	NA	NA	NA	166747957	166789733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.103	chr2	+	4817	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	-1155	-2	1155	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGTGTATTTGTAGGT	NA	False	NA	NA	False	AAAAAG	-10	NA	166747957	166789464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.104	chr2	+	5929	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-21	-2267	-2	2267	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTTTGATCTAAAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	166747957	166790576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.105	chr2	+	3848	23	NIC	ENSMUSG00000002718.15	novel	3087	24	NA	NA	-2	-122	intron_retention	FALSE	canonical	1	5	junction_11	250.197508757441	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747957	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771814_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.106	chr2	+	3516	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-2	-122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	182.534010339322	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747957	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783161_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.109	chr2	+	4632	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-11	-980	8	980	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCATGCCTGTGCGTCAG	NA	False	NA	NA	False	CATAAA	-14	NA	166747967	166789289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.11	chr2	+	5977	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-98	-2877	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	35.7702734875477	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTAAGTGCGCGGTGTT	NA	False	NA	10	True	AATAAA	-22	NA	166647409	166737095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718535_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.110	chr2	+	3516	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-3	-122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.778210213252	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747975	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757095_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.111	chr2	+	3527	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-3	-13	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	183.567658006966	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTCAGAATGGTGGT	NA	False	NA	24	True	CATAAA	-20	NA	166747975	166788296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.114	chr2	+	3459	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-3	-122	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	180.808350808867	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747975	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771767_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.115	chr2	+	3929	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	4	-126	intron_retention	FALSE	canonical	3	15	junction_15	186.097309700291	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747982	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.116	chr2	+	4511	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	4	-874	4	874	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGCTTCTTGTTAGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	166747982	166789183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.119	chr2	+	2514	14	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	4	13288	4	698	5prime_fragment	FALSE	canonical	3	726	junction_12	62.061336333144	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCATCATCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	166747982	166775021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052
ES.20780.12	chr2	+	8867	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-97	0	-97	0	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647410	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.120	chr2	+	3374	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	7	-117	combination_of_known_splicesites	FALSE	canonical	3	3	junction_2	181.364227417557	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGACAGGATTTGGTGC	NA	False	NA	16	True	AATAAA	-28	NA	166747985	166788192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.122	chr2	+	4604	24	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	10	122	10	-122	intron_retention	FALSE	canonical	3	726	junction_12	68.5901225755855	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747988	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.123	chr2	+	3414	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	10	-122	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	182.011061380973	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747988	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.124	chr2	+	3433	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	10	-126	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	182.481957822015	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747988	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769434_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.125	chr2	+	3407	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	10	-126	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	186.133943681823	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747988	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.126	chr2	+	3399	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	12	-122	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	184.745858238029	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747990	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.127	chr2	+	3502	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	12	-122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	182.667712132045	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747990	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769261_166769371_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.128	chr2	+	3472	24	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	13	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	186.133943681823	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATTTGGTGCTTTCTG	NA	False	NA	22	True	AATAAA	-34	NA	166747991	166788198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166778000_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.130	chr2	+	3259	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	14	368	14	-80	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTATGGCCATGGTCTC	NA	False	NA	-97	True	NA	NA	NA	166747992	166787941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.131	chr2	+	3397	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-126	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	183.567658006966	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747992	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.132	chr2	+	3403	24	FSM	ENSMUSG00000002718.15	ENSMUST00000169290.8	3087	24	-38	-278	14	-10	multi-exon	FALSE	canonical	1	5	junction_11	246.716915299491	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAGAATGGTGGTTTT	NA	False	NA	27	True	CATAAA	-23	NA	166747992	166788299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771814_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.133	chr2	+	7147	20	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-126	intron_retention	FALSE	canonical	3	15	junction_15	192.624316803001	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747992	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326
ES.20780.134	chr2	+	3297	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-127	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	177.073361704495	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTCTTCAGGACAG	NA	False	NA	6	True	AATAAA	-18	NA	166747992	166788182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.135	chr2	+	3505	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-14	combination_of_known_splicesites	FALSE	canonical	2	9	junction_6	184.745858238029	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAACTCAGAATGGTGG	NA	False	NA	23	True	CATAAA	-19	NA	166747992	166788295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.136	chr2	+	3344	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	189.652711097011	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAACTCAGAATGGTGG	NA	False	NA	23	True	CATAAA	-19	NA	166747992	166788295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.138	chr2	+	8577	21	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-126	intron_retention	FALSE	canonical	3	726	junction_12	66.6456862820093	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747992	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166785127_166786296_166786529_166787623
ES.20780.14	chr2	+	8804	38	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-68	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	35.7197311929106	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCTCCCAGTGTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	166647439	166739969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.140	chr2	+	3317	24	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	186.381664236869	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTCTTCAGGACAG	NA	False	NA	6	True	AATAAA	-18	NA	166747992	166788182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769721_166771779_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.141	chr2	+	3333	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-126	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	186.593945687173	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747992	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.142	chr2	+	3235	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-123	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	189.652711097011	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTTCAGGACAGGATT	NA	False	NA	10	True	AATAAA	-22	NA	166747992	166788186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.143	chr2	+	3395	25	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	14	-122	combination_of_known_junctions	FALSE	canonical	1	5	junction_11	181.735035873353	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747992	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771814_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.146	chr2	+	3381	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	15	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	181.714806312896	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGATTTTGTCTGTT	NA	False	NA	22	True	NA	NA	NA	166747993	166788060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761680_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.147	chr2	+	3610	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	15	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	182.479788644904	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAAGTGTCTTCAGGAC	NA	False	NA	4	True	AATAAA	-16	NA	166747993	166788180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770764_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.148	chr2	+	3415	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	15	-8	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	177.073361704495	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAATGGTGGTTTTTA	NA	False	NA	29	True	CATAAA	-25	NA	166747993	166788301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.149	chr2	+	4604	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	16	-12	intron_retention	FALSE	canonical	3	15	junction_15	186.818248175171	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTCAGAATGGTGGTT	NA	False	NA	25	True	CATAAA	-21	NA	166747994	166788297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.15	chr2	+	5929	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-61	-2894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	35.9222093509536	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAATAGCTCACAGCCA	NA	False	NA	-7	True	AATAAA	-5	NA	166647446	166737078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733694_166733826_166735420_166735539_166736531
ES.20780.152	chr2	+	3457	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	23	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	189.520670932602	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAACTCAGAATGGTGG	NA	False	NA	23	True	CATAAA	-19	NA	166748001	166788295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.154	chr2	+	3566	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	24	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	182.479788644904	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166748002	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770802_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.157	chr2	+	3485	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	24	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	182.632067891217	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166748002	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777941_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.159	chr2	+	3498	24	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.789816194506	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGGTGGTTTTTATT	NA	False	NA	31	True	CATAAA	-27	NA	166748003	166788303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761540_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.16	chr2	+	6955	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-58	-2883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	46.2104064259325	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCCACCTAAGTGCGC	NA	False	NA	4	True	AATAAA	-16	NA	166647449	166737089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166697949_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727703_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.160	chr2	+	3045	11	ISM	ENSMUSG00000002718.15	ENSMUST00000169290.8	3087	24	-26	15268	26	-1570	intron_retention	FALSE	canonical	3	804	junction_8	53.8376262478204	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTGTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	166748004	166772753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877
ES.20780.162	chr2	+	5953	21	NNC	ENSMUSG00000002718.15	novel	3087	24	NA	NA	-23	-3	intron_retention	FALSE	canonical	2	10	junction_10	262.268426426057	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGGTTTTTATTGTT	NA	False	NA	34	True	CATAAA	-30	NA	166748007	166788306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771767_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166785127_166786296
ES.20780.164	chr2	+	3125	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-22	-126	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	190.125208852804	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166748008	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.166	chr2	+	4474	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-22	-122	intron_retention	FALSE	canonical	1	5	junction_11	184.794107059129	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166748008	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771814_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.167	chr2	+	3513	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-22	-122	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_11	179.512297435456	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166748008	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771680_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.169	chr2	+	3622	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-22	-13	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_11	179.512297435456	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTCAGAATGGTGGT	NA	False	NA	24	True	CATAAA	-20	NA	166748008	166788296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771680_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.17	chr2	+	4860	23	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-56	18855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.9424488719778	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	166647451	166709746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166697944_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207
ES.20780.171	chr2	+	3317	23	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-19	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	189.744026136649	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGGTTTTTATTGTT	NA	False	NA	34	True	CATAAA	-30	NA	166748011	166788306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.172	chr2	+	3530	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-18	-57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	323.25328691291	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCCCATCTGGACTCC	NA	False	NA	-20	True	AATGAA	-17	NA	166748012	166788252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761668_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769527_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774056_166774115_166776672_166776806_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.176	chr2	+	3452	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	1	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	182.675315336619	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166748031	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764683_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.177	chr2	+	4954	23	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	2	-122	intron_retention	FALSE	canonical	0	0	junction_13	188.696485490228	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166748032	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772591_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166785127_166786296_166786529_166787623
ES.20780.179	chr2	+	4826	18	ISM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	19380	126	-2091	-126	intron_retention	FALSE	canonical	3	726	junction_6	66.4457007026678	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166767358	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.18	chr2	+	3532	21	Fusion	ENSMUSG00000074582.11_ENSMUSG00000002718.15	novel	1587	10	NA	NA	-55	-126	multi-exon	FALSE	canonical	0	0	junction_10	356.069515684789	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166647452	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.180	chr2	+	2331	6	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-801	698	intron_retention	FALSE	canonical	3	726	junction_4	43.0655314607866	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCATCATCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	166768648	166775021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166769257_166769362_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052
ES.20780.181	chr2	+	3617	16	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	3	-57	intron_retention	FALSE	canonical	0	0	junction_12	218.412698043559	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCCCATCTGGACTCC	NA	False	NA	-20	True	AATGAA	-17	NA	166769487	166788252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783196_166783326_166783413_166783934_166784017_166784979_166785127_166786296
ES.20780.182	chr2	+	2052	13	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	15400	-469	2812	-127	3prime_fragment	FALSE	canonical	3	747	junction_10	72.8839926793867	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTCTTCAGGACAG	NA	False	NA	6	True	AATAAA	-18	NA	166772499	166788182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.183	chr2	+	4659	9	NIC	ENSMUSG00000002718.15	novel	1587	10	NA	NA	-1140	-126	intron_retention	FALSE	canonical	3	747	junction_7	76.5023488201506	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166775534	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166784017_166784979_166785127_166786296
ES.20780.184	chr2	+	3791	9	ISM	ENSMUSG00000002718.15	ENSMUST00000169290.8	3087	24	29103	-162	432	-126	3prime_fragment	FALSE	canonical	3	747	junction_6	78.3752990424917	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166777133	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.185	chr2	+	1419	7	ISM	ENSMUSG00000002718.15	ENSMUST00000163437.2	1992	17	12376	-456	-927	-125	3prime_fragment	FALSE	canonical	3	747	junction_4	89.7114200583676	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCTTCAGGACAGGA	NA	False	NA	8	True	AATAAA	-20	NA	166781825	166788184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.186	chr2	+	1532	7	ISM	ENSMUSG00000002718.15	ENSMUST00000163437.2	1992	17	12378	-571	-925	-10	3prime_fragment	FALSE	canonical	3	747	junction_4	89.7114200583676	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAGAATGGTGGTTTT	NA	False	NA	27	True	CATAAA	-23	NA	166781827	166788299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.187	chr2	+	167	1	Intergenic	novelGene_17188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2480	False	NA	NA	False	NA	NA	NA	166808128	166808295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166808100_166808300
ES.20780.188	chr2	+	168	1	Intergenic	novelGene_17189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACAATTATGATT	5755	False	NA	NA	False	NA	NA	NA	166811403	166811571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166811400_166811600
ES.20780.189	chr2	+	208	1	Intergenic	novelGene_17190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAGCCAGATGTAGTA	424	False	NA	NA	False	NA	NA	NA	166825710	166825918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166825700_166825900
ES.20780.190	chr2	+	172	1	Intergenic	novelGene_17191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTTTTGTTTTGTTTT	919	False	NA	NA	False	NA	NA	NA	166827989	166828161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166828000_166828200
ES.20780.191	chr2	+	215	1	Intergenic	novelGene_17192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAGCAAGGTAGA	2166	False	NA	NA	False	NA	NA	NA	166829236	166829451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_166829200_166829500
ES.20780.192	chr2	+	2764	22	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-271	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.790127081323	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTCTGTGAATCTG	NA	False	NA	NA	False	NA	NA	NA	166856841	166876870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166856892_166857115_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.193	chr2	+	2822	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	58	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	184.228519779105	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	166857170	166876865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870029_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.194	chr2	+	2644	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	183.848606195424	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	166857174	166876865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861805_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.195	chr2	+	2917	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	666	junction_11	73.1547140542949	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	166857174	166876865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.196	chr2	+	2203	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-52	0	-52	0	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857177	166867733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ES.20780.197	chr2	+	2709	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-49	-13	intron_retention	FALSE	canonical	3	666	junction_12	73.0464884418424	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857180	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.199	chr2	+	2989	19	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-43	-12	intron_retention	FALSE	canonical	3	666	junction_11	61.8098687633553	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTTGAACAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	166857186	166876855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392
ES.20780.2	chr2	+	6455	41	Fusion	ENSMUSG00000074582.11_ENSMUSG00000042854.10	novel	849	6	NA	NA	16	-2875	multi-exon	TRUE	canonical	0	0	junction_2	45.7910403354193	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAAGTGCGCGGTGTTTT	NA	False	NA	12	True	AATAAA	-24	NA	166635702	166737097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_166635989_166637301_166637742_166639391_166639474_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.200	chr2	+	2565	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-41	-13	combination_of_known_splicesites	FALSE	canonical	1	26	junction_2	183.112153998112	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857188	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.201	chr2	+	2544	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-40	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	184.128345183462	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTTGAACAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	166857189	166876855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861879_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.204	chr2	+	1939	9	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_8	237.315191254163	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCATAGTATTA	NA	False	NA	NA	False	NA	NA	NA	166857200	166867725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166866710
ES.20780.207	chr2	+	2585	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-19	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	240.966989440463	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACCTTCTTGAACAAGC	NA	False	NA	NA	False	NA	NA	NA	166857210	166876852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873565_166875482_166875578_166875653_166875779_166875966_166876044_166876392_166876465_166876558
ES.20780.208	chr2	+	3839	18	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-18	-14	intron_retention	FALSE	canonical	3	682	junction_11	71.4955899140823	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCTTCTTGAACAAGCC	NA	False	NA	NA	False	NA	NA	NA	166857211	166876853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.210	chr2	+	6290	12	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-17	-13	intron_retention	FALSE	non_canonical	0	0	junction_6	292.585058622148	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857212	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166859810_166861546_166861607_166861799_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166869588_166869689_166869788_166871282_166871404_166871583_166873254_166873362_166873470_166874121_166876780
ES.20780.214	chr2	+	2166	8	NNC	ENSMUSG00000017999.17	novel	2151	8	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	270.080260179776	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCATAGTATTA	NA	False	NA	NA	False	NA	NA	NA	166857213	166867725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857354_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ES.20780.215	chr2	+	2692	20	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	103	13	-14	-13	intron_retention	FALSE	canonical	3	666	junction_12	60.6004123112968	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857215	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392
ES.20780.216	chr2	+	2728	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	666	junction_12	73.5263723015267	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	166857219	166876865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.217	chr2	+	2570	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-10	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	285.600437674735	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGCAGACCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	166857219	166876845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857341_166859662_166859805_166861546_166861607_166861799_166861960_166862419_166862464_166862551_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.218	chr2	+	2581	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	183.848606195424	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857219	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861594_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.219	chr2	+	4237	13	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-10	-15	intron_retention	FALSE	non_canonical	0	0	junction_12	212.320953982408	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACCTTCTTGAACAAGC	NA	False	NA	NA	False	NA	NA	NA	166857219	166876852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166871583_166873254_166873362_166873470_166874121_166876782
ES.20780.22	chr2	+	5529	37	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-55	-2876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.1884359283519	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAAGTGCGCGGTGTTT	NA	False	NA	11	True	AATAAA	-23	NA	166647452	166737096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166687369_166687522_166690786_166690918_166693020_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712238_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.220	chr2	+	2938	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	-5	-13	intron_retention	FALSE	canonical	3	666	junction_12	67.8785782485281	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857224	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876465_166876558
ES.20780.221	chr2	+	2495	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	3	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	181.635628071812	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCTTGAACAAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	166857232	166876856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166876392_166876465_166876558
ES.20780.223	chr2	+	2589	21	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	184.009748383068	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857233	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871291_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.224	chr2	+	3318	19	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	4	-2	intron_retention	FALSE	canonical	3	666	junction_10	75.0991114675126	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	166857233	166876865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.225	chr2	+	6655	17	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	4	-13	intron_retention	FALSE	canonical	3	682	junction_10	70.1950129549814	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857233	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166869689_166869788_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.226	chr2	+	2762	20	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_12	188.99492144608	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	166857234	166876867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871501_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.228	chr2	+	2712	15	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	9	-13	intron_retention	FALSE	non_canonical	0	0	junction_8	266.772164505786	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166857238	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166874166_166876753
ES.20780.23	chr2	+	8629	38	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	36.4353194781993	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647454	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.231	chr2	+	2028	7	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	2431	8	2431	-8	3prime_fragment	FALSE	canonical	3	722	junction_6	24.1620685280784	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCATAGTATTA	NA	False	NA	NA	False	NA	NA	NA	166859660	166867725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ES.20780.232	chr2	+	3529	17	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	3581	-12	intron_retention	FALSE	canonical	3	666	junction_10	72.8444136070159	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTTGAACAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	166860810	166876855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876465_166876558
ES.20780.233	chr2	+	2060	16	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	5431	13	5314	-13	3prime_fragment	FALSE	canonical	3	666	junction_7	82.1330627701171	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166862543	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.234	chr2	+	2364	13	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	10252	13	-756	-13	3prime_fragment	FALSE	canonical	3	666	junction_4	88.2242644250057	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTCTTGAACAAGCCT	NA	False	NA	NA	False	NA	NA	NA	166867364	166876854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ES.20780.24	chr2	+	8668	37	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	35.5960164750059	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647454	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.25	chr2	+	4945	33	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-19247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	37.2162047828295	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCCTATGTGTTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	166647454	166720725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702619_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437
ES.20780.27	chr2	+	8644	37	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.6586964093221	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647454	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693969_166695182_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.28	chr2	+	1510	9	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-1360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.5530724187466	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTATGTTATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	166647454	166689531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166689281
ES.20780.29	chr2	+	6359	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	2464	-53	-2464	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCAGAGTTGGTTTATC	NA	False	NA	NA	False	GATAAA	-12	NA	166647454	166737508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.3	chr2	+	1583	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	17	2826	17	764	multi-exon	FALSE	canonical	3	131	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGCTAAGACATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	166635703	166638599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166635989_166637301
ES.20780.30	chr2	+	8694	38	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	36.0794513246664	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647454	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.31	chr2	+	5936	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-2881	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	35.7518377963591	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACCTAAGTGCGCGG	NA	False	NA	6	True	AATAAA	-18	NA	166647454	166737091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687375_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.32	chr2	+	6076	36	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	6664	-53	-6664	5prime_fragment	FALSE	canonical	3	156	junction_4	18.5153879742428	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTGCATTTATAATT	NA	False	NA	NA	False	AATAAA	-31	NA	166647454	166733308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188
ES.20780.33	chr2	+	8717	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	106	-53	-106	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTATGTAAAGTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	166647454	166739866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.34	chr2	+	4024	1	Genic_Genomic	ENSMUSG00000074582.11	novel	NA	NA	NA	NA	-53	-39413	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGATCCTGTGACAGA	NA	False	NA	NA	False	NA	NA	NA	166647454	166651478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_166647500_166651500
ES.20780.35	chr2	+	6144	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	2679	-53	-2679	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGAGCTTGCAAGGTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	166647454	166737293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.36	chr2	+	8829	40	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	32225	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_39	35.5048125748656	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAAAACTGGACGGAG	NA	False	NA	NA	False	AAAAAG	-9	NA	166647454	166772197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531_166739968_166772186
ES.20780.37	chr2	+	8853	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.9547268418419	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647454	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698296_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.38	chr2	+	8743	38	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-52	-10	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	36.1174126221903	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647455	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.4	chr2	+	594	1	ISM	ENSMUSG00000042854.10	ENSMUST00000065753.2	1375	2	1264	0	28	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	166635714	166636308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166635700_166636300
ES.20780.40	chr2	+	855	1	Genic_Genomic	ENSMUSG00000074582.11	novel	NA	NA	NA	NA	-49	-42578	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATACTTGTCTGATTGC	NA	False	NA	NA	False	NA	NA	NA	166647458	166648313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_166647500_166648300
ES.20780.43	chr2	+	5836	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-48	-2877	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	35.247924832338	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTAAGTGCGCGGTGTT	NA	False	NA	10	True	AATAAA	-22	NA	166647459	166737095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676495_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.44	chr2	+	7160	37	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-47	-2875	intron_retention	FALSE	canonical	3	156	junction_4	20.0790105997947	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAAGTGCGCGGTGTTTT	NA	False	NA	12	True	AATAAA	-24	NA	166647460	166737097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.45	chr2	+	2604	14	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-47	41011	-47	8070	5prime_fragment	FALSE	canonical	3	156	junction_4	17.6672062736244	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAACAGCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	166647460	166698961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326
ES.20780.46	chr2	+	4102	22	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-46	18855	intron_retention	FALSE	canonical	0	0	junction_12	54.5503990062954	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	166647461	166709746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166701182_166701295_166701705_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207
ES.20780.47	chr2	+	5592	35	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-46	-15808	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_34	36.123921662286	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATTTTCTGTTTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	166647461	166724164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723529_166723712
ES.20780.5	chr2	+	1973	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	30	2423	30	1167	multi-exon	FALSE	canonical	3	131	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTACTTTAACAGAGT	NA	False	NA	NA	False	TTTAAA	-4	NA	166635716	166639002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166635989_166637301
ES.20780.51	chr2	+	5981	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-45	-2881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	35.7306114249082	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACCTAAGTGCGCGG	NA	False	NA	6	True	AATAAA	-18	NA	166647462	166737091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735586_166736531
ES.20780.52	chr2	+	5932	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-44	2882	-44	-2882	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCACCTAAGTGCGCG	NA	False	NA	5	True	AATAAA	-17	NA	166647463	166737090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.53	chr2	+	8751	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-43	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.8968976043575	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647464	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647704_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.54	chr2	+	8891	62	Fusion	ENSMUSG00000074582.11_ENSMUSG00000002718.15	novel	8770	39	NA	NA	-43	-3	multi-exon	FALSE	canonical	0	0	junction_38	325.486960344765	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTGGTTTTTATTGTT	NA	False	NA	34	True	CATAAA	-30	NA	166647464	166788306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.57	chr2	+	8798	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	35.7518377963591	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCTCCCAGTGTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	166647470	166739969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687375_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.59	chr2	+	8524	60	Fusion	ENSMUSG00000074582.11_ENSMUSG00000002718.15	novel	8770	39	NA	NA	-33	-122	multi-exon	FALSE	canonical	0	0	junction_38	316.737018649622	1186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166647474	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.6	chr2	+	6114	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-125	2781	-125	-2781	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTTCCTTATGTCTTG	NA	False	NA	106	True	GATAAA	-13	NA	166647382	166737191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.60	chr2	+	8741	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-33	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	35.178059140256	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647474	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706664_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.61	chr2	+	5812	38	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-33	-2879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	46.5579431945499	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTAAGTGCGCGGTG	NA	False	NA	8	True	AATAAA	-20	NA	166647474	166737093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712172_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.62	chr2	+	9095	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	35.7306114249082	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTCCCAGTGTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	166647474	166739970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736237
ES.20780.63	chr2	+	5905	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-29	-2875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	35.9601291213838	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAAGTGCGCGGTGTTTT	NA	False	NA	12	True	AATAAA	-24	NA	166647478	166737097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702300_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.65	chr2	+	8571	38	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-10	-2881	intron_retention	FALSE	canonical	3	156	junction_4	20.0292335655724	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACCTAAGTGCGCGG	NA	False	NA	6	True	AATAAA	-18	NA	166647497	166737091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.66	chr2	+	8575	37	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-9	-10	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	36.2035035989544	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166647498	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.68	chr2	+	5489	36	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	28878	2883	6809	-2883	3prime_fragment	FALSE	canonical	3	156	junction_1	19.7579227198631	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCCACCTAAGTGCGC	NA	False	NA	4	True	AATAAA	-16	NA	166676385	166737089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.69	chr2	+	8362	36	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	28878	10	6809	-10	3prime_fragment	FALSE	canonical	3	156	junction_1	19.7579227198631	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166676385	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.70	chr2	+	5054	34	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	8546	-2876	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_21	37.1791384774406	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAAGTGCGCGGTGTTT	NA	False	NA	11	True	AATAAA	-23	NA	166678122	166737096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712238_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.71	chr2	+	4549	30	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	17884	-2881	combination_of_known_splicesites	FALSE	canonical	2	4	junction_24	39.4747620271319	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACCTAAGTGCGCGG	NA	False	NA	6	True	AATAAA	-18	NA	166687460	166737091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.72	chr2	+	7775	30	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	21319	-1	intron_retention	FALSE	canonical	3	157	junction_11	18.9002010068016	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCCCAGTGTCATCA	NA	False	NA	NA	False	AATAAA	-15	NA	166690895	166739971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.73	chr2	+	4511	31	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	21327	-2883	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	38.5599821346201	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCCACCTAAGTGCGC	NA	False	NA	4	True	AATAAA	-16	NA	166690903	166737089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706664_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.75	chr2	+	4352	30	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	23553	-2881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.891178551031	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACCTAAGTGCGCGG	NA	False	NA	6	True	AATAAA	-18	NA	166693129	166737091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166699541_166699694_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.76	chr2	+	7859	25	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	28902	-3	intron_retention	FALSE	canonical	3	157	junction_7	17.4701630565436	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCTCCCAGTGTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	166698478	166739969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.77	chr2	+	5838	18	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	37114	0	intron_retention	FALSE	canonical	3	177	junction_5	15.0454904209507	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166706690	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.78	chr2	+	3651	17	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	60295	2879	38226	-2879	3prime_fragment	FALSE	canonical	3	177	junction_3	14.7346318243789	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTAAGTGCGCGGTG	NA	False	NA	8	True	AATAAA	-20	NA	166707802	166737093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.79	chr2	+	5492	17	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	61323	10	39254	-10	3prime_fragment	FALSE	canonical	3	177	junction_3	14.7346318243789	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166708830	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.8	chr2	+	5844	37	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-107	-2878	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	35.5960164750059	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTAAGTGCGCGGTGT	NA	False	NA	9	True	AATAAA	-21	NA	166647400	166737094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166647756_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.80	chr2	+	3520	14	NIC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	39760	-2877	intron_retention	FALSE	canonical	3	177	junction_1	14.626311704693	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTAAGTGCGCGGTGTT	NA	False	NA	10	True	AATAAA	-22	NA	166709336	166737095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166709378_166710811_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.81	chr2	+	4700	11	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	67987	5	45918	-5	3prime_fragment	FALSE	canonical	3	185	junction_5	13.9230025497376	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTGCTCCCAGTGTC	1386	False	NA	NA	False	AATAAA	-11	NA	166715494	166739967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.82	chr2	+	4306	8	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	72681	3	50612	-3	3prime_fragment	FALSE	canonical	3	185	junction_2	14.4758771895925	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCTCCCAGTGTCAT	6080	False	NA	NA	False	AATAAA	-13	NA	166720188	166739969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.83	chr2	+	4104	6	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	58122	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.4014084407258	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	False	NA	NA	False	AATAAA	-6	NA	166727698	166739962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166727830_166732188_166732358_166733686_166733826_166734203_166734320_166735420_166735539_166736531
ES.20780.84	chr2	+	3894	4	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	84654	0	62585	0	3prime_fragment	FALSE	canonical	3	194	junction_1	17.0163320241336	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166732161	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166732358_166733686_166733826_166735420_166735539_166736531
ES.20780.85	chr2	+	4237	3	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	85640	0	63571	0	3prime_fragment	FALSE	canonical	3	208	junction_2	13.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166733147	166739972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166733826_166735420_166735539_166736531
ES.20780.86	chr2	+	980	3	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	86018	2879	63949	-2879	3prime_fragment	FALSE	canonical	3	208	junction_2	13.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTAAGTGCGCGGTG	NA	False	NA	8	True	AATAAA	-20	NA	166733525	166737093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166733826_166735420_166735539_166736531
ES.20780.87	chr2	+	3806	25	NNC	ENSMUSG00000002718.15	novel	2748	23	NA	NA	-7380	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.778210213252	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACTCAGAATGGTGGT	NA	False	NA	24	True	CATAAA	-20	NA	166740579	166788296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166740877_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.88	chr2	+	3997	26	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-7172	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.988714728052	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	False	NA	37	True	CATAAA	-33	NA	166740787	166788309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166740877_166747711_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.89	chr2	+	3545	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-17	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	182.507971667602	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747942	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776678_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.9	chr2	+	4089	25	ISM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-100	30186	-100	18895	5prime_fragment	FALSE	canonical	3	156	junction_4	16.1690290370201	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTGGGACTATAGC	NA	False	NA	NA	False	AATAAA	-23	NA	166647407	166709786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207
ES.20780.90	chr2	+	3328	24	FSM	ENSMUSG00000002718.15	ENSMUST00000169290.8	3087	24	-79	-162	-8	-126	multi-exon	FALSE	canonical	1	5	junction_11	246.716915299491	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTCTTCAGGACAGG	NA	False	NA	7	True	AATAAA	-19	NA	166747951	166788183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771814_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.92	chr2	+	3532	26	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-4	100080	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	178.988714728052	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAACTCCAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	166747955	166888389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623_166788159_166888370
ES.20780.95	chr2	+	5545	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-22	-1882	-3	1882	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTATTACCATTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	166747956	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.96	chr2	+	3550	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	-22	113	-3	-113	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGGATTTGGTGCTTTC	NA	False	NA	20	True	AATAAA	-32	NA	166747956	166788196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ES.20780.99	chr2	+	3494	25	NNC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	-3	-122	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_23	176.494550592614	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGACAGGATTT	NA	False	NA	11	True	AATAAA	-23	NA	166747956	166788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786343_166786529_166787623
ES.20781.1	chr2	+	1122	4	FSM	ENSMUSG00002075888.1_ENSMUSG00000074578.15	ENSMUST00000125841.3	525	4	-458	-139	-169	-1	multi-exon	FALSE	canonical	3	874	junction_1	54.7783412186483	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGTCTTGAGTTT	NA	False	NA	34	True	AATAAA	-44	NA	166904684	166907781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166905218_166905555_166905648_166907078_166907401_166907606
ES.20781.2	chr2	+	849	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	-112	1	-112	-1	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGTCTTGAGTTT	NA	False	NA	34	True	AATAAA	-44	NA	166904741	166907781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ES.20781.3	chr2	+	1549	2	FSM	ENSMUSG00002075888.1_ENSMUSG00000074578.15	ENSMUST00000136378.2	731	2	-367	-451	-80	-29	multi-exon	FALSE	canonical	3	1008	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAAATCTGACTAA	NA	False	NA	6	True	AATAAA	-16	NA	166904773	166907753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_166905648_166907078
ES.20781.4	chr2	+	2435	2	NNC	ENSMUSG00000074578.15	novel	731	2	NA	NA	0	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTGTCTTGAGTTT	NA	False	NA	34	True	AATAAA	-44	NA	166905140	166907781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166906362_166906567
ES.20781.6	chr2	+	989	3	NIC	ENSMUSG00000074578.15	novel	659	4	NA	NA	1	-5	intron_retention	FALSE	canonical	3	933	junction_2	37.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTGCTGTGTCTTGA	NA	False	NA	30	True	AATAAA	-40	NA	166905141	166907777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_166905648_166907078_166907138_166907353
ES.20781.7	chr2	+	2087	3	NNC	ENSMUSG00000074578.15	novel	659	4	NA	NA	4	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	437	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATCTGCTGTGTCTTGA	NA	False	NA	30	True	AATAAA	-40	NA	166905146	166907777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_166905218_166905555_166906362_166906567
ES.20782.1	chr2	-	5566	1	Antisense	novelGene_ENSMUSG00000074582.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACCTCAGATGCAAATC	NA	False	NA	NA	False	NA	NA	NA	166671401	166665835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_166665800_166671400
ES.20783.1	chr2	-	1130	1	Antisense	novelGene_ENSMUSG00000002718.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAGGAGACAGTTGT	NA	False	NA	NA	False	NA	NA	NA	166748298	166747168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_166747200_166748300
ES.20783.2	chr2	-	975	1	Antisense	novelGene_ENSMUSG00000002718.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	166748244	166747269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_166747300_166748200
ES.20784.1	chr2	-	202	1	Intergenic	novelGene_17185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAGTTATATCCCCCA	NA	False	NA	NA	False	NA	NA	NA	166750183	166749981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166750000_166750200
ES.20785.1	chr2	-	1644	1	Intergenic	novelGene_17186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATATAGGTGAACACTC	NA	False	NA	NA	False	NA	NA	NA	166752543	166750899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166750900_166752500
ES.20785.2	chr2	-	156	1	Intergenic	novelGene_17187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	166751439	166751283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166751300_166751400
ES.20786.1	chr2	-	8675	3	Antisense	novelGene_ENSMUSG00000002718.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAACAACAAAAAGAACC	8031	False	NA	NA	False	NA	NA	NA	166778741	166766466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_166769257_166769362_166771486_166774979
ES.20786.3	chr2	-	3717	10	Antisense	novelGene_ENSMUSG00000002718.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	8031	False	NA	NA	False	NA	NA	NA	166778741	166766504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_166768374_166769158_166769257_166769362_166769530_166769631_166769761_166770875_166770943_166771703_166771906_166772499_166772586_166774051_166774119_166776676_166776810_166777842
ES.20787.1	chr2	-	4105	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	20	-556	7	556	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTTGATACCTACCAAG	NA	False	NA	NA	False	AATAAA	-18	NA	166838178	166788912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.10	chr2	-	2989	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	3	577	3	21	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTAACTGAAGAAAGTG	NA	False	NA	0	True	AATAAA	-30	NA	166838195	166790045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.11	chr2	-	3232	12	NNC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	-201	15	intron_retention	FALSE	canonical	0	0	junction_5	85.6077929564595	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAGCAGTAACTGAAG	NA	False	NA	-6	True	AATAAA	-24	NA	166838420	166790051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794221_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.12	chr2	-	3125	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	-136	-13	-102	13	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATTGAGCAGTAACTGA	NA	False	NA	-8	True	AATAAA	-22	NA	166838321	166790053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.13	chr2	-	2952	12	NNC	ENSMUSG00000039536.17	novel	2976	12	NA	NA	70	9	intron_retention	FALSE	non_canonical	0	0	junction_1	87.7024458510962	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCAATTGAGCAGTAA	NA	False	NA	-12	True	AATAAA	-18	NA	166838115	166790057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791281_166791627_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.14	chr2	-	3734	11	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	47	6	intron_retention	FALSE	canonical	3	104	junction_7	52.4057248781085	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTTCCAATTGAGCAG	NA	False	NA	-15	True	AATAAA	-15	NA	166837976	166790060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.15	chr2	-	2849	11	NNC	ENSMUSG00000039536.17	novel	2976	12	NA	NA	3	6	intron_retention	FALSE	canonical	0	0	junction_4	111.65881066893	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTTCCAATTGAGCAG	NA	False	NA	-15	True	AATAAA	-15	NA	166838195	166790060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793186_166793267_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.17	chr2	-	2773	11	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	38	0	intron_retention	FALSE	canonical	3	9	junction_5	87.1922588307012	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	False	NA	-21	True	AATAAA	-9	NA	166838147	166790066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.19	chr2	-	3016	12	NNC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	20	0	intron_retention	FALSE	canonical	1	2	junction_5	85.1415932966427	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	False	NA	-21	True	AATAAA	-9	NA	166838165	166790066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794167_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.2	chr2	-	4135	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	-5	-1154	-5	556	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTTGATACCTACCAAG	NA	False	NA	NA	False	AATAAA	-18	NA	166838190	166788912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.20	chr2	-	3042	11	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	-5	1	intron_retention	FALSE	canonical	3	104	junction_7	53.8976808406447	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838224	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.21	chr2	-	2894	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	-43	125	-9	1	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838228	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.22	chr2	-	2843	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	3	723	3	1	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838195	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.23	chr2	-	3793	11	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	19	1	intron_retention	FALSE	canonical	3	104	junction_7	52.4057248781085	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838166	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.24	chr2	-	2747	13	NIC	ENSMUSG00000039536.17	novel	2976	12	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	85.030223384917	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838166	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166792775_166792859_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.25	chr2	-	3841	11	NIC	ENSMUSG00000039536.17	novel	2976	12	NA	NA	2	1	intron_retention	FALSE	canonical	3	75	junction_7	60.1771551338213	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838196	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.26	chr2	-	2850	12	NNC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_5	85.6077929564595	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTTAATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	166838178	166790191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794221_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.27	chr2	-	2255	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	11	710	11	389	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTTAGTCGTGTCTAC	NA	False	NA	-8	True	NA	NA	NA	166838174	166790776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.28	chr2	-	2291	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	-30	1308	-9	389	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTTAGTCGTGTCTAC	NA	False	NA	-8	True	NA	NA	NA	166838228	166790776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.29	chr2	-	1701	13	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	20	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	81.3245811547775	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTGAGAACTGCTTT	NA	False	NA	NA	False	TATAAA	-18	NA	166838165	166791218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166792775_166792859_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.3	chr2	-	3542	12	NNC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	20	2	intron_retention	FALSE	canonical	0	0	junction_2	80.5867942342831	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTTTCCTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	166838165	166789466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166791280_166791663_166791750_166792146_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.30	chr2	-	1884	11	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	-145	1441	17	106	5prime_fragment	FALSE	canonical	3	104	junction_7	52.687759489278	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTACGTGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	166838168	166791507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.31	chr2	-	2540	1	Intergenic	novelGene_17193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGGATTCCAGTTGT	NA	False	NA	NA	False	AATGAA	-15	NA	166835818	166833278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166833300_166835800
ES.20787.5	chr2	-	3566	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	5	-595	5	-3	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATCCTATTTTCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	166838180	166789471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.6	chr2	-	3428	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	19	-471	19	-127	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTTCTGAGCGCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	166838166	166789595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.7	chr2	-	3391	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	33	145	20	-145	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATACCAAGTGGA	NA	False	NA	NA	False	ATTAAA	-5	NA	166838165	166789613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.8	chr2	-	3233	12	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	19	-145	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	83.9320858868783	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATACCAAGTGGA	NA	False	NA	NA	False	ATTAAA	-5	NA	166838166	166789613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792859_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20787.9	chr2	-	4370	11	NIC	ENSMUSG00000039536.17	novel	3569	12	NA	NA	20	-145	intron_retention	FALSE	canonical	3	104	junction_7	52.4057248781085	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATACCAAGTGGA	NA	False	NA	NA	False	ATTAAA	-5	NA	166838165	166789613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ES.20788.1	chr2	-	3762	1	Genic_Genomic	ENSMUSG00000082665.2	novel	NA	NA	NA	NA	1318	3171	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTTGGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	166849641	166845879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_166845900_166849600
ES.20789.1	chr2	-	187	1	Intergenic	novelGene_17194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGATAAAGATGGA	NA	False	NA	NA	False	AATAAA	-7	NA	166850081	166849894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166849900_166850100
ES.2079.1	chr1	+	191	1	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTATTCTTTTAATTA	2062	False	NA	NA	False	NA	NA	NA	181064128	181064319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181064100_181064300
ES.20790.1	chr2	-	179	1	Intergenic	novelGene_17195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166850310	166850131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166850100_166850300
ES.20791.1	chr2	-	321	1	Intergenic	novelGene_17196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166856306	166855985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166856000_166856300
ES.20791.2	chr2	-	158	1	Intergenic	novelGene_17197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	166856307	166856149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166856100_166856300
ES.20792.1	chr2	-	178	1	Intergenic	novelGene_17198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	166863260	166863082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166863100_166863300
ES.20793.1	chr2	-	177	1	Intergenic	novelGene_17199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	166872383	166872206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166872200_166872400
ES.20794.1	chr2	-	7231	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	-10	-3	-10	3	multi-exon	FALSE	canonical	3	14	junction_7	5.9245752350676	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCTCTTATCTGTGCT	950	False	NA	NA	False	AATAAA	-21	NA	166904945	166877709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
ES.20794.2	chr2	-	7136	14	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	7.80911317120645	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	958	False	NA	NA	False	AATAAA	-18	NA	166904937	166877712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904513
ES.20794.4	chr2	-	7036	15	NNC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.2340590007643	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	1237	False	NA	NA	False	AATAAA	-18	NA	166904658	166877712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166900192_166900288_166901951_166902063_166904429
ES.20794.5	chr2	-	6788	14	NNC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	8.58028564647751	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	1384	False	NA	NA	False	AATAAA	-18	NA	166904511	166877712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902057_166904429
ES.20794.6	chr2	-	6353	3	NNC	ENSMUSG00000039501.15	novel	4147	7	NA	NA	-3069	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTCATCTCTTATC	NA	False	NA	NA	False	AATAAA	-15	NA	166888484	166877715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166882808_166886899_166887227_166887550
ES.20794.7	chr2	-	3632	2	NNC	ENSMUSG00000039501.15	novel	2751	8	NA	NA	-4199	293	intron_retention	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGTCGGTCAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	166889614	166885658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166887227_166887550
ES.20794.8	chr2	-	4367	6	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	-18	-1743	intron_retention	FALSE	canonical	3	22	junction_1	3.9496835316263	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACCAGGGGACTTAATA	1318	False	NA	NA	False	NA	NA	NA	166904577	166887779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_166888927_166889460_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
ES.20794.9	chr2	-	2573	4	NNC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	36	-3045	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9888847706114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAAAGCATTGCTGCC	1295	False	NA	NA	False	NA	NA	NA	166904600	166894535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_166895039_166897073_166898862_166901951_166902063_166904429
ES.20795.1	chr2	-	178	1	Intergenic	novelGene_17200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGTTAGAGATG	NA	False	NA	NA	False	NA	NA	NA	166911491	166911313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_166911300_166911500
ES.20796.1	chr2	+	6342	1	Antisense	novelGene_ENSMUSG00000050556.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCACCCGTTTCTG	6826	False	NA	NA	False	NA	NA	NA	166944207	166950549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_166944200_166950500
ES.20797.1	chr2	+	2806	3	Antisense	novelGene_ENSMUSG00000050556.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	166971380	166975876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_166971491_166972786_166975341_166975734
ES.20798.1	chr2	+	2902	1	Genic_Genomic	ENSMUSG00000085151.8	novel	NA	NA	NA	NA	-35	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	167031545	167034447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_167031500_167034400
ES.20799.1	chr2	-	6878	3	FSM	ENSMUSG00000050556.10	ENSMUST00000059826.10	4015	3	-6	-2857	-6	-1647	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCTGCCAACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	167032081	166942474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166948280_167029976_167030709_167031740
ES.20799.2	chr2	-	4203	3	FSM	ENSMUSG00000050556.10	ENSMUST00000059826.10	4015	3	-147	-41	-147	41	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTCTAATCTAGGTT	NA	False	NA	NA	False	NA	NA	NA	167032222	166945290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_166948280_167029976_167030709_167031740
ES.208.1	chr1	+	176	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29942065	29942241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_29942100_29942200
ES.2080.1	chr1	-	470	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-62	-75	-62	75	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGTCTGGGCTTGAG	NA	False	NA	NA	False	NA	NA	NA	181069947	181069477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181069500_181069900
ES.20800.1	chr2	+	207	1	Intergenic	novelGene_17201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGACTTTGGACAAGT	NA	False	NA	NA	False	NA	NA	NA	167037766	167037973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167037800_167038000
ES.20801.1	chr2	+	2019	3	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAACTTGCTTCTTGGT	65	False	NA	NA	False	NA	NA	NA	167062899	167065651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167063185_167063338_167063420_167063998
ES.20801.2	chr2	+	2654	2	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	65	False	NA	NA	False	NA	NA	NA	167062899	167065656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167063236_167063338
ES.20801.3	chr2	+	2754	1	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	68	False	NA	NA	False	NA	NA	NA	167062902	167065656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167062900_167065700
ES.20801.4	chr2	+	634	5	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.27760839478607	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	68	False	NA	NA	False	NA	NA	NA	167062902	167065656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167063185_167063338_167063420_167063998_167064039_167065106_167065243_167065561
ES.20801.5	chr2	+	667	5	Antisense	novelGene_ENSMUSG00000017969.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.34477204006491	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	86	False	NA	NA	False	NA	NA	NA	167062920	167065656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167063236_167063338_167063420_167063998_167064039_167065106_167065243_167065561
ES.20802.1	chr2	+	171	1	Intergenic	novelGene_17203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	167075161	167075332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167075200_167075300
ES.20803.1	chr2	-	1810	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	9	288	-6	-288	multi-exon	FALSE	canonical	3	9	junction_8	29.1890390386528	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCTTCCAAATCGGG	5256	False	NA	-32	True	AATAAA	-21	NA	167082515	167045114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
ES.20803.10	chr2	-	1601	10	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-12540	-291	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	30.924439973172	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACTTGCTTCCAAATC	6513	False	NA	-35	True	AATAAA	-18	NA	167095064	167045117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167095018
ES.20803.11	chr2	-	178	1	Intergenic	novelGene_17202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACAACAACTCAAG	10000	False	NA	NA	False	NA	NA	NA	167050870	167050692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167050700_167050900
ES.20803.2	chr2	-	959	5	NIC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-12975	-289	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	34.8164831653055	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	NA	False	NA	-33	True	AATAAA	-20	NA	167063311	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167063128
ES.20803.3	chr2	-	1617	10	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-16106	-289	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	30.924439973172	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	2947	False	NA	-33	True	AATAAA	-20	NA	167098630	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167098570
ES.20803.4	chr2	-	1214	7	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-13909	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.8675134594813	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	NA	False	NA	-33	True	AATAAA	-20	NA	167064245	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167064141
ES.20803.5	chr2	-	1729	10	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-9171	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.0761708558459	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	9882	False	NA	-33	True	AATAAA	-20	NA	167091695	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167091523
ES.20803.7	chr2	-	3950	2	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	30194	289	-1994	-289	intron_retention	FALSE	canonical	3	74	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	8742	False	NA	-33	True	AATAAA	-20	NA	167052330	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_167045389_167048653
ES.20803.8	chr2	-	990	5	NNC	ENSMUSG00000017969.14	novel	2107	10	NA	NA	-3762	-289	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	31.3876966341909	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCTTCCAAATCGG	8916	False	NA	-33	True	AATAAA	-20	NA	167054098	167045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167053884
ES.20804.1	chr2	+	177	1	Intergenic	novelGene_17204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	167101287	167101464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167101300_167101500
ES.20805.1	chr2	+	177	1	Intergenic	novelGene_17205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTCCCACA	NA	False	NA	NA	False	NA	NA	NA	167109196	167109373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167109200_167109400
ES.20806.1	chr2	-	180	1	Intergenic	novelGene_17206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGCATTCCTC	NA	False	NA	NA	False	NA	NA	NA	167119857	167119677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167119700_167119900
ES.20807.1	chr2	-	962	2	Intergenic	novelGene_17207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGCCCTGTGACTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	167139334	167138165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167138804_167139010
ES.20808.1	chr2	+	1725	9	Antisense	novelGene_ENSMUSG00000017929.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCGGGGGCGAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	167142876	167191131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167143402_167143927_167144034_167146917_167147038_167147578_167147766_167148508_167148624_167149459_167149589_167151142_167151257_167155006_167155144_167190839
ES.20808.2	chr2	+	8867	6	Antisense	novelGene_ENSMUSG00000017929.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCGGGAGGGGGCCGACG	NA	False	NA	NA	False	NA	NA	NA	167142876	167191098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167143402_167143927_167147766_167148508_167148624_167149459_167149589_167151142_167155144_167190839
ES.20809.1	chr2	+	177	1	Intergenic	novelGene_17211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	167207281	167207458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167207300_167207500
ES.20809.2	chr2	+	176	2	Intergenic	novelGene_17212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATAGTATAGATGGG	NA	False	NA	NA	False	NA	NA	NA	167207282	167213867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167207441_167213849
ES.20809.3	chr2	+	1375	1	Intergenic	novelGene_17213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167207807	167209182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167207800_167209200
ES.2081.1	chr1	+	4036	1	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181078837	181082873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181078800_181082900
ES.2081.2	chr1	+	1987	2	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181078840	181082870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181080532_181082574
ES.20810.1	chr2	-	4272	10	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	-441	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	74.9088334799931	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167191544	167140363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837_167191151_167191529
ES.20810.10	chr2	-	4078	9	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	67	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	79.0233351612041	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCTTGGTAGTCGTCT	NA	False	NA	-6	True	AGTAAA	-18	NA	167191036	167140368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167143404_167143929_167144035_167146978_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ES.20810.11	chr2	-	3221	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	1	988	1	-988	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGCCTCCCTTGGTTAG	NA	False	NA	NA	False	AATAAA	-29	NA	167191102	167141351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ES.20810.12	chr2	-	1694	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	5	2511	5	245	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTGCATCTCTACAGT	NA	False	NA	NA	False	NA	NA	NA	167191098	167142874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ES.20810.13	chr2	-	6401	1	Intergenic	novelGene_17208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGATGGCTGGAGGGC	7072	False	NA	NA	False	NA	NA	NA	167183227	167176826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167176800_167183200
ES.20810.14	chr2	-	3212	1	Intergenic	novelGene_17209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTTGTTGTTCCTGTTT	3241	False	NA	NA	False	AATAAA	-17	NA	167187058	167183846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167183800_167187100
ES.20810.15	chr2	-	1869	2	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	-18769	-40620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATTCGCTGTTACAG	NA	False	NA	NA	False	NA	NA	NA	167209872	167190149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167191873_167209726
ES.20810.16	chr2	-	1717	2	Intergenic	novelGene_17210	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGAACAGTATTCTAT	NA	False	NA	NA	False	NA	NA	NA	167205275	167203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167203999_167204248
ES.20810.17	chr2	-	452	1	Intergenic	novelGene_17214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTGTCCAGCCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	167209759	167209307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167209300_167209800
ES.20810.2	chr2	-	4323	9	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	416	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.3456638701826	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167190687	167140363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190308
ES.20810.5	chr2	-	4205	9	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	78.9414339874821	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167191102	167140363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148620_167149459_167149589_167151142_167151257_167155006_167155142_167190837
ES.20810.9	chr2	-	4192	10	NNC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.9088334799931	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGGTAGTCGTCTCT	NA	False	NA	-4	True	AGTAAA	-20	NA	167191130	167140366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167141650_167141691_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ES.20811.1	chr2	+	156	1	Intergenic	novelGene_17215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	167248567	167248723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167248600_167248700
ES.20812.1	chr2	+	4566	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	-44	-1	-44	1	multi-exon	TRUE	non_canonical	2	49	junction_9	20.9574531790005	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGTGTCACGTGTTT	NA	False	NA	8	True	AATAAA	-21	NA	167263587	167318921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.11	chr2	+	5276	13	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_7	30.9904779282641	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263640	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167288457_167293126_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
ES.20812.12	chr2	+	5520	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	49	junction_8	20.1125658761494	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263640	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
ES.20812.14	chr2	+	1964	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	1	combination_of_known_splicesites	FALSE	non_canonical	1	2	junction_14	38.9224765871016	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGGCAGGGTTCAGC	NA	False	NA	NA	False	AATGAA	-13	NA	167263642	167316557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167316210
ES.20812.15	chr2	+	9770	14	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_6	41.3630198158213	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167289641_167289698_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.16	chr2	+	5403	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	49	junction_8	20.2852984531491	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.17	chr2	+	2546	11	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	521	intron_retention	FALSE	non_canonical	2	49	junction_8	22.6132704401641	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167263642	167310167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604
ES.20812.18	chr2	+	4518	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	30.511268410212	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299385_167301558_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.19	chr2	+	4390	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_10	33.810977835937	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167263642	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.2	chr2	+	1663	11	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-35	521	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_6	33.1475489289932	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167263596	167310167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604
ES.20812.20	chr2	+	7690	15	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_10	34.1504026330584	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCATGGCAGGGTTCAG	NA	False	NA	NA	False	AATGAA	-12	NA	167263642	167316556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310903_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.21	chr2	+	4493	16	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	44.0442202034879	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263704_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299387_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.22	chr2	+	4366	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	34.1015477002959	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263642	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.23	chr2	+	4556	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_6	32.5442007122621	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263642	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288374_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.24	chr2	+	4427	16	FSM	ENSMUSG00000039463.15	ENSMUST00000073873.5	4429	16	2	0	0	0	multi-exon	FALSE	non_canonical	1	4	junction_2	31.8966386247133	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167263642	167318918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167263686_167266038_167266218_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.25	chr2	+	4061	12	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	51.8618635662274	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263643	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263704_167266038_167266218_167276701_167276783_167283048_167283108_167293126_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.27	chr2	+	4031	13	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	40.4595133710506	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167263644	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167309604_167309688_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.28	chr2	+	4357	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	2	-1	combination_of_known_splicesites	FALSE	non_canonical	1	2	junction_15	32.9068719604617	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167263644	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167316210
ES.20812.29	chr2	+	2114	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.4378612696645	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGCAGGGTTCAGCC	NA	False	NA	NA	False	AATGAA	-14	NA	167263645	167316558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266187_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.3	chr2	+	4677	18	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.0085728089392	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGTGTCACGTGTTT	NA	False	NA	8	True	AATAAA	-21	NA	167263609	167318921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285472_167286069_167286187_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307375_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.30	chr2	+	2211	6	NNC	ENSMUSG00000039463.15	novel	4241	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.5114419492969	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263646	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285436_167317133
ES.20812.31	chr2	+	4618	16	ISM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	16	2	-2	0	intron_retention	FALSE	non_canonical	2	49	junction_9	20.7025494940975	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167263647	167318918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
ES.20812.32	chr2	+	4122	13	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	42.8261180693381	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263648	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167293126_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.33	chr2	+	6146	4	ISM	ENSMUSG00000039463.15	ENSMUST00000135353.8	1884	6	-1	-27	-1	27	intron_retention	FALSE	canonical	3	99	junction_1	13.2245562832516	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACCTTCCCAGAAACTG	NA	False	NA	NA	False	NA	NA	NA	167263648	167288897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048
ES.20812.34	chr2	+	4521	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_1	32.4785987228513	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263649	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263704_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.35	chr2	+	2125	17	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	30.511268410212	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCATGGCAGGGTTCAG	NA	False	NA	NA	False	AATGAA	-12	NA	167263651	167316556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301580_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.36	chr2	+	4189	14	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.5454410090813	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167263651	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293155_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.38	chr2	+	2100	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	4	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_6	29.1803586909643	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCAGGGTTCAGCCTG	NA	False	NA	NA	False	AATGAA	-16	NA	167263657	167316560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.39	chr2	+	4569	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	23	junction_6	29.3220158284675	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167263661	167318918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
ES.20812.4	chr2	+	2174	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	-12	2359	-12	5	multi-exon	FALSE	non_canonical	2	49	junction_9	20.9574531790005	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGGGTTCAGCCTGA	NA	False	NA	NA	False	AATGAA	-17	NA	167263619	167316561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.40	chr2	+	4343	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	2	1	combination_of_known_junctions	FALSE	non_canonical	2	15	junction_11	36.7898749380748	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGTGTCACGTGTTT	NA	False	NA	8	True	AATAAA	-21	NA	167263663	167318921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.41	chr2	+	1988	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	2	0	combination_of_known_junctions	FALSE	non_canonical	1	2	junction_5	34.3125638916174	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCATGGCAGGGTTCAG	NA	False	NA	NA	False	AATGAA	-12	NA	167263663	167316556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.42	chr2	+	4348	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	5	0	combination_of_known_junctions	FALSE	non_canonical	1	2	junction_5	34.3125638916174	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263666	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.43	chr2	+	4466	16	ISM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	2405	3	-2	-1	3prime_fragment	FALSE	non_canonical	2	49	junction_8	21.5567468170254	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167266036	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.44	chr2	+	7424	12	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	10	junction_5	32.7527678472048	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGCAGGGTTCAGCC	NA	False	NA	NA	False	AATGAA	-14	NA	167266038	167316558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.45	chr2	+	4344	16	NNC	ENSMUSG00000039463.15	novel	3733	8	NA	NA	6631	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.5011774254113	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167272669	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167272729_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.46	chr2	+	4219	12	NIC	ENSMUSG00000039463.15	novel	4429	16	NA	NA	-7626	-1	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_2	31.7099457766333	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167285259	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.47	chr2	+	4149	13	ISM	ENSMUSG00000039463.15	ENSMUST00000131956.8	4852	17	21715	0	-7519	0	3prime_fragment	FALSE	non_canonical	2	49	junction_5	21.7987958383026	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167285366	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.48	chr2	+	10214	3	NNC	ENSMUSG00000039463.15	novel	787	5	NA	NA	-5677	8986	intron_retention	FALSE	non_canonical	0	0	junction_2	0.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTAACACTGCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	167287208	167297856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167289641_167289698_167294392_167294767
ES.20812.5	chr2	+	4342	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-5	0	combination_of_known_splicesites	FALSE	non_canonical	1	2	junction_14	38.9224765871016	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263626	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167316210
ES.20812.50	chr2	+	7730	10	ISM	ENSMUSG00000039463.15	ENSMUST00000131956.8	4852	17	25669	2	-3565	-1	3prime_fragment	FALSE	non_canonical	2	49	junction_2	22.6328724111688	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTGTTGTGTCACGT	NA	False	NA	4	True	AATAAA	-17	NA	167289320	167318917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.51	chr2	+	3304	10	NNC	ENSMUSG00000039463.15	novel	4429	16	NA	NA	-1477	0	intron_retention	FALSE	non_canonical	0	0	junction_9	39.1123737169937	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCATGGCAGGGTTCAG	NA	False	NA	NA	False	AATGAA	-12	NA	167291408	167316556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316187
ES.20812.52	chr2	+	4747	4	NIC	ENSMUSG00000039463.15	novel	787	5	NA	NA	-1228	547	intron_retention	FALSE	canonical	3	101	junction_2	8.60232526704263	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAATGTGACCAACTGC	NA	False	NA	NA	False	NA	NA	NA	167291657	167310193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167293271_167299246_167301675_167307260_167307378_167309604
ES.20812.53	chr2	+	6598	9	NIC	ENSMUSG00000039463.15	novel	4852	17	NA	NA	-248	0	intron_retention	FALSE	canonical	3	101	junction_2	9.79476901207987	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167292637	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167293271_167299246_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.54	chr2	+	3480	7	NIC	ENSMUSG00000039463.15	novel	4852	17	NA	NA	8574	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	42.6513644434605	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167301648	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167301675_167307260_167307378_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.55	chr2	+	2146	7	ISM	ENSMUSG00000039463.15	ENSMUST00000148454.2	3733	8	13218	2359	13218	4	3prime_fragment	FALSE	canonical	3	107	junction_4	9.11805291105995	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCAGGGTTCAGCCTG	NA	False	NA	NA	False	AATGAA	-16	NA	167306292	167316560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.56	chr2	+	3860	6	ISM	ENSMUSG00000039463.15	ENSMUST00000148454.2	3733	8	13978	0	13978	0	intron_retention	FALSE	canonical	3	107	junction_4	8.01498596380555	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167307052	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947
ES.20812.57	chr2	+	4266	4	ISM	ENSMUSG00000039463.15	ENSMUST00000148454.2	3733	8	19185	1	19185	0	3prime_fragment	FALSE	canonical	3	107	junction_1	10.8423039781937	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGTTGTGTCACGTG	NA	False	NA	5	True	AATAAA	-18	NA	167312259	167318918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.6	chr2	+	4491	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_6	29.1803586909643	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263626	167318920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.7	chr2	+	4501	17	NNC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	30.511268410212	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263626	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299378_167301584_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.8	chr2	+	4465	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	36.8634718326361	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263639	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301580_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20812.9	chr2	+	4267	15	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	30.3282215173947	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167263639	167318919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ES.20813.1	chr2	-	2116	2	Antisense	novelGene_ENSMUSG00000039463.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167276637	167274382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_167276082_167276220
ES.20814.1	chr2	+	1821	2	Antisense	novelGene_ENSMUSG00000047030.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGTGTGTGCGTG	NA	False	NA	NA	False	NA	NA	NA	167324970	167332339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167325226_167330773
ES.20814.2	chr2	+	4624	1	Antisense	novelGene_ENSMUSG00000047030.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCACAGTGCAAACTCAC	NA	False	NA	NA	False	NA	NA	NA	167325363	167329987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167325400_167330000
ES.20815.1	chr2	-	3987	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	25	0	10	0	multi-exon	FALSE	canonical	3	52	junction_2	1	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCGAAGATTTTTTTC	4607	False	NA	NA	False	ATTAAA	-17	NA	167334782	167323052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167326500_167327077_167327514_167334678
ES.20815.10	chr2	-	5834	3	NIC	ENSMUSG00000047030.16	novel	4012	3	NA	NA	-2818	34	intron_retention	FALSE	canonical	2	3	junction_2	25.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	8821	False	NA	NA	False	AATAAA	-19	NA	167330568	167323318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167326500_167327077_167327514_167328351
ES.20815.11	chr2	-	5844	4	NIC	ENSMUSG00000047030.16	novel	462	4	NA	NA	273	-1204	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.7790233867277	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGAGTGTTCAACT	4897	False	NA	NA	False	NA	NA	NA	167334492	167324556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167326500_167327077_167327514_167328351_167328413_167331088
ES.20815.2	chr2	-	4533	2	NIC	ENSMUSG00000047030.16	novel	4012	3	NA	NA	14	-1	intron_retention	FALSE	canonical	3	52	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGCCGAAGATTTTTTT	4638	False	NA	NA	False	ATTAAA	-16	NA	167334751	167323053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167327514_167334678
ES.20815.4	chr2	-	3780	4	NIC	ENSMUSG00000047030.16	novel	1531	4	NA	NA	-11	38	intron_retention	FALSE	canonical	0	0	junction_3	24.7790233867277	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCATGGTGTTACAGCC	4613	False	NA	NA	False	AATAAA	-23	NA	167334776	167323314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167326500_167327077_167327514_167328351_167328413_167334678
ES.20815.5	chr2	-	3752	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	-2	262	-2	38	multi-exon	FALSE	canonical	3	52	junction_2	1	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCATGGTGTTACAGCC	4580	False	NA	NA	False	AATAAA	-23	NA	167334809	167323314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167326500_167327077_167327514_167334678
ES.20815.6	chr2	-	3998	5	NIC	ENSMUSG00000047030.16	novel	462	4	NA	NA	-2	38	intron_retention	FALSE	canonical	0	0	junction_3	22.8309001136617	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCATGGTGTTACAGCC	4595	False	NA	NA	False	AATAAA	-23	NA	167334794	167323314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167326500_167327077_167327514_167328351_167328413_167331088_167331289_167334678
ES.20815.8	chr2	-	3926	4	NIC	ENSMUSG00000047030.16	novel	1531	4	NA	NA	5	34	intron_retention	FALSE	canonical	1	1	junction_2	24.9844396019247	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	4602	False	NA	NA	False	AATAAA	-19	NA	167334787	167323318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167326500_167327077_167327514_167331088_167331289_167334678
ES.20815.9	chr2	-	4322	2	NIC	ENSMUSG00000047030.16	novel	4012	3	NA	NA	2	34	intron_retention	FALSE	canonical	3	52	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCATGGTGTTAC	4584	False	NA	NA	False	AATAAA	-19	NA	167334805	167323318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167327514_167334678
ES.20816.1	chr2	+	895	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	275	-22350	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACCCTTGTCTAGATTG	NA	False	NA	NA	False	AATAAA	-28	NA	167334839	167335734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167334800_167335700
ES.20816.10	chr2	+	3337	5	NIC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	-11	0	intron_retention	FALSE	canonical	3	578	junction_2	32.8966183672426	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345354	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167354545_167356585
ES.20816.11	chr2	+	2859	6	NNC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.7785822514	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345356	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167346236_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.12	chr2	+	5589	5	NIC	ENSMUSG00000006418.18	novel	1985	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	578	junction_1	25.5575331360443	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345357	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.13	chr2	+	1111	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	354	1037	-3	-1028	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCCTTGGTTCTGCAGT	NA	False	NA	NA	False	AATAAA	-26	NA	167345362	167357056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.14	chr2	+	1765	3	NIC	ENSMUSG00000006418.18	novel	1985	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	290	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345363	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167345522_167354436_167354545_167356585
ES.20816.15	chr2	+	2089	6	NNC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	229.471915492942	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345363	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167345522_167348966_167349118_167352795_167352903_167353180_167353247_167354436_167354545_167356585
ES.20816.18	chr2	+	4181	5	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	355	7	-2	0	intron_retention	FALSE	canonical	3	578	junction_2	28.831406486677	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGCTGCAATGTTTT	NA	False	NA	17	True	AATAAA	-18	NA	167345363	167358086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436
ES.20816.19	chr2	+	4773	3	NNC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	328.5	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAAGCTGCAATGTTTT	NA	False	NA	17	True	AATAAA	-18	NA	167345363	167358086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167345522_167348966_167351687_167356191
ES.20816.2	chr2	+	1308	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	275	-21937	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGCTTAGTTGGCCGG	NA	False	NA	NA	False	NA	NA	NA	167334839	167336147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167334800_167336100
ES.20816.22	chr2	+	2110	6	NNC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	238.000336134216	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345369	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167345522_167348988_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.24	chr2	+	5361	4	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	363	9	6	0	intron_retention	FALSE	canonical	3	578	junction_2	32.3968448395142	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345371	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131
ES.20816.25	chr2	+	2485	1	NIC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	6	-10228	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTATAAGGATAGGGCAT	NA	False	NA	NA	False	NA	NA	NA	167345371	167347856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167345400_167347900
ES.20816.26	chr2	+	2020	5	NIC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	262.466188298607	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345373	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167356585
ES.20816.27	chr2	+	3208	6	NNC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.7785822514	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345375	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167346604_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.28	chr2	+	2391	4	NIC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	3423	2	intron_retention	FALSE	canonical	3	578	junction_1	26.4112770527204	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGCTGCAATGTTTTCA	NA	False	NA	19	True	AATAAA	-20	NA	167348788	167358088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167349118_167352795_167353247_167354436_167354545_167356585
ES.20816.3	chr2	+	791	2	NNC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	301	-22347	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTGTCTAGATTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	167334865	167335737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167335073_167335153
ES.20816.4	chr2	+	2185	6	NNC	ENSMUSG00000006418.18	novel	3001	8	NA	NA	310	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	241.98214810188	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAATGTTTTCATTT	NA	False	NA	22	True	AATAAA	-23	NA	167334874	167358091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167335073_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.5	chr2	+	4821	9	NNC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	751	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	298.65312236774	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAATGTTTTCATTT	NA	False	NA	22	True	AATAAA	-23	NA	167335315	167358091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167335919_167337279_167339163_167341730_167341914_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.6	chr2	+	3635	1	Intergenic	novelGene_17216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	167337356	167340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167337400_167341000
ES.20816.7	chr2	+	2230	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	270	2	-87	-2	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAATGTTTTCATTT	NA	False	NA	22	True	AATAAA	-23	NA	167345278	167358091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ES.20816.8	chr2	+	2399	5	NIC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	-34	0	intron_retention	FALSE	canonical	3	578	junction_2	34.3984011256337	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345331	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167345522_167348966_167349118_167352795_167353247_167354436_167354545_167356585
ES.20816.9	chr2	+	1075	7	NNC	ENSMUSG00000006418.18	novel	2502	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	219.784490404173	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345340	167358084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585_167356701_167357786
ES.20817.1	chr2	-	149	1	Intergenic	novelGene_17217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTAAGCAGGCAGGCC	5620	False	NA	NA	False	NA	NA	NA	167361643	167361494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167361500_167361600
ES.20818.1	chr2	+	2016	4	NNC	ENSMUSG00000042821.8	novel	1621	3	NA	NA	-13049	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGCTCAGTGTTGGG	3433	False	NA	NA	False	AATAAA	-19	NA	167367065	167384729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167367173_167379821_167380292_167380590_167381119_167383818
ES.20819.1	chr2	+	228	1	Intergenic	novelGene_17218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACACTAATACAAATCA	8930	False	NA	NA	False	AATAAA	-31	NA	167393020	167393248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167393000_167393200
ES.2082.1	chr1	+	3403	2	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGGGCCTGTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	181112613	181116119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181113275_181113377
ES.20820.1	chr2	-	172	1	Intergenic	novelGene_17219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATGAAAATACCAG	NA	False	NA	NA	False	NA	NA	NA	167399601	167399429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167399400_167399600
ES.20821.1	chr2	+	340	1	Intergenic	novelGene_17220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAATCGTAAAATGTTAA	NA	False	NA	NA	False	NA	NA	NA	167421636	167421976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167421600_167422000
ES.20822.1	chr2	+	2442	2	Antisense	novelGene_ENSMUSG00000089739.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAACTGTGCACACA	1265	False	NA	NA	False	NA	NA	NA	167452285	167462126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_167452350_167459748
ES.20823.1	chr2	+	2814	1	Intergenic	novelGene_17221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGGAGAT	NA	False	NA	NA	False	AAGAAA	-35	NA	167474113	167476927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167474100_167476900
ES.20824.1	chr2	-	1919	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	119	3	3	-3	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCAGGCTGTGCCCTT	9437	False	NA	NA	False	AATAAA	-16	NA	167473896	167449560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ES.20824.10	chr2	-	1834	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	9	-919	1	-3	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9435	False	NA	NA	False	AATAAA	-19	NA	167473898	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
ES.20824.11	chr2	-	3956	2	FSM	ENSMUSG00000078923.11	ENSMUST00000144628.2	647	2	-2210	-1099	-2210	-3	multi-exon	FALSE	canonical	3	2304	junction_1	0	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	167454778	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167451168_167452223
ES.20824.12	chr2	-	1750	5	NNC	ENSMUSG00000078923.11	novel	924	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1163.86862982899	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9445	False	NA	NA	False	AATAAA	-19	NA	167473888	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459748_167459898_167464608_167464654_167473859
ES.20824.13	chr2	-	3332	5	NNC	ENSMUSG00000078923.11	novel	924	5	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1151.99487303547	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9444	False	NA	NA	False	AATAAA	-19	NA	167473889	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459748_167459898_167469582_167471209_167473859
ES.20824.14	chr2	-	1372	3	NNC	ENSMUSG00000078923.11	novel	1586	3	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1083.5	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9411	False	NA	NA	False	AATAAA	-19	NA	167473922	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451005_167459826_167459898_167473859
ES.20824.16	chr2	-	1715	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1097.36178577937	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9429	False	NA	NA	False	AATAAA	-19	NA	167473904	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459748_167459898_167473865
ES.20824.17	chr2	-	1617	5	NNC	ENSMUSG00000078923.11	novel	924	5	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	986.988475110019	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTCGGTGGTTTTAT	9434	False	NA	NA	False	AATAAA	-17	NA	167473899	167449768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167450731_167450827_167451168_167452223_167452350_167459748_167459898_167473859
ES.20824.18	chr2	-	2437	8	NNC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-17	18491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.5592462835	925	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGGCAGTGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	167503493	167466036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167466055_167477111_167477172_167484514_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.19	chr2	-	306	2	ISM	ENSMUSG00000078923.11	ENSMUST00000140216.2	433	4	-4	18719	-1	-11439	5prime_fragment	FALSE	canonical	3	48	junction_1	0	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAGAAATGTCACCATC	9430	False	NA	NA	False	AATATA	-34	NA	167473903	167470946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_167471209_167473859
ES.20824.2	chr2	-	1814	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	22	205	22	1	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTGGTTTTATTTTAAG	9340	False	NA	NA	False	AATAAA	-23	NA	167473993	167449762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ES.20824.20	chr2	-	2333	1	Intergenic	novelGene_17222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3452	False	NA	NA	False	NA	NA	NA	167482201	167479868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167479900_167482200
ES.20824.21	chr2	-	2396	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-52	-15	-52	15	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTGTTTTAATACT	NA	False	NA	NA	False	NA	NA	NA	167503528	167484512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.22	chr2	-	3404	5	NIC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-8	12	intron_retention	FALSE	canonical	3	233	junction_2	10.6389614154766	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTTTGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	167503484	167484515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167486103_167486683_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.23	chr2	-	3986	4	NIC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	233	junction_1	12.2836838484589	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503497	167484527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.24	chr2	-	2927	5	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	-77	34758	-77	-34758	5prime_fragment	FALSE	canonical	3	221	junction_1	16.0214699700121	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503493	167484527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.25	chr2	-	5403	4	ISM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	11072	47	-5307	-47	3prime_fragment	FALSE	canonical	3	221	junction_2	11.4697670227235	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	454	False	NA	NA	False	NA	NA	NA	167492404	167484574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887
ES.20824.26	chr2	-	5626	1	FSM	ENSMUSG00002075647.1	ENSMUST00020183593.1	96	1	-3821	-1709	-3821	1709	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2658	False	NA	NA	False	NA	NA	NA	167490200	167484574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167484600_167490200
ES.20824.27	chr2	-	1807	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-96	618	-96	2	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGTTGCCGTGTGGTG	NA	False	NA	-6	True	AATATA	-27	NA	167503572	167485145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.28	chr2	-	2304	5	ISM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	-81	35385	-81	-35385	5prime_fragment	FALSE	canonical	3	221	junction_1	16.0214699700121	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTCACTCTGGTTGC	NA	False	NA	-15	True	AATATA	-18	NA	167503497	167485154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.3	chr2	-	1716	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1097.36178577937	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGGTGGTTTTATTTTA	9427	False	NA	NA	False	AATAAA	-21	NA	167473906	167449764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459748_167459889_167473859
ES.20824.30	chr2	-	2036	6	NNC	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-33	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.9539894151304	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGCATCTCCTTCACT	NA	False	NA	-23	True	AATATA	-10	NA	167503509	167485162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167486103_167486683_167487206_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.31	chr2	-	1607	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-21	743	-21	-123	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGCTTGCTTGTCAAT	NA	False	NA	NA	False	NA	NA	NA	167503497	167485270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.32	chr2	-	1080	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	-38	1287	-38	-159	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTCTTCTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	167503514	167485814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ES.20824.33	chr2	-	5538	1	Genic_Genomic	ENSMUSG00000090213.2_ENSMUSG00000089739.3	novel	NA	NA	NA	NA	-17	-1851	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	167503493	167497955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_167498000_167503500
ES.20824.34	chr2	-	3991	2	Genic_Genomic	ENSMUSG00000090213.2	novel	2329	6	NA	NA	-2	-1851	multi-exon	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	167503478	167497955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_167498001_167499532
ES.20824.4	chr2	-	1824	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1055.30795926539	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGGTGGTTTTATTTTA	9413	False	NA	NA	False	AATAAA	-21	NA	167473920	167449764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459663_167459898_167473859
ES.20824.5	chr2	-	1752	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1055.30795926539	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGGTGGTTTTATTTTA	9435	False	NA	NA	False	AATAAA	-21	NA	167473898	167449764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459713_167459898_167473859
ES.20824.8	chr2	-	1642	3	FSM	ENSMUSG00000078923.11	ENSMUST00000060645.13	1586	3	-59	3	-44	-3	multi-exon	FALSE	canonical	3	27	junction_1	1070	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9382	False	NA	NA	False	AATAAA	-19	NA	167473951	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167451168_167459748_167459898_167473859
ES.20824.9	chr2	-	1784	5	NNC	ENSMUSG00000078923.11	novel	924	5	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1151.99487303547	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	9425	False	NA	NA	False	AATAAA	-19	NA	167473908	167449766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167451168_167452223_167452350_167459748_167459898_167471149_167471209_167473859
ES.20825.1	chr2	-	175	1	Intergenic	novelGene_17223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	167508013	167507838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167507800_167508000
ES.20826.1	chr2	+	1973	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	-417	-52	-417	52	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGATTTATGCGAGAT	NA	False	NA	84	True	NA	NA	NA	167530417	167532390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167530400_167532400
ES.20826.2	chr2	+	1431	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	-14	87	-14	-87	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTATGTATATTTTGAGAA	NA	False	NA	-55	True	TATAAA	-27	NA	167530820	167532251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167530800_167532300
ES.20827.1	chr2	-	7946	1	NIC	ENSMUSG00000090213.2	novel	1837	6	NA	NA	29	-27663	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGTCCACATTGGCT	NA	False	NA	NA	False	NA	NA	NA	167531713	167523767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_167523800_167531700
ES.20827.2	chr2	-	6534	2	Genic_Genomic	ENSMUSG00000090213.2	novel	1837	6	NA	NA	21	-27690	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167531721	167523794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_167526652_167528044
ES.20827.3	chr2	-	373	1	Intergenic	novelGene_17224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	167524842	167524469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167524500_167524800
ES.20827.4	chr2	-	6152	1	Genic_Genomic	ENSMUSG00000090213.2	novel	NA	NA	NA	NA	-338	-29824	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGGCCTAGAAATACCA	NA	False	NA	NA	False	NA	NA	NA	167532080	167525928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_167525900_167532100
ES.20828.1	chr2	-	199	1	Antisense	novelGene_ENSMUSG00000056501.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	167532383	167532184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_167532200_167532400
ES.20829.1	chr2	-	175	1	Intergenic	novelGene_17225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	167554830	167554655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167554700_167554800
ES.2083.1	chr1	-	218	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGATAGTCCCTTTTC	6347	False	NA	NA	False	NA	NA	NA	181137856	181137638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181137600_181137900
ES.20830.1	chr2	-	236	1	Intergenic	novelGene_17226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AAAAAG	-38	NA	167674300	167674064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167674100_167674300
ES.20831.1	chr2	+	373	1	Intergenic	novelGene_17227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCCTTAAACAGACAA	NA	False	NA	NA	False	NA	NA	NA	167734361	167734734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167734400_167734700
ES.20831.2	chr2	+	134	1	Intergenic	novelGene_17228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	167734362	167734496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167734400_167734500
ES.20832.1	chr2	+	1899	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	-112	2426	-112	2222	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGGTTTTTGTTATTT	948	False	NA	NA	False	AAAAAG	-34	NA	167774134	167818879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.2	chr2	+	4226	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	-12	-1	-12	1	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGATGTGCTTGCCTT	1048	False	NA	11	True	AATAAA	-17	NA	167774234	167821306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.3	chr2	+	1548	8	NIC	ENSMUSG00000027540.14	novel	4213	9	NA	NA	15	2219	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	37.6200120430928	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGCAGGTTTTTGTTA	1075	False	NA	NA	False	AAAAAG	-31	NA	167774261	167818876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167818344
ES.20832.4	chr2	+	4295	10	NNC	ENSMUSG00000027540.14	novel	4292	10	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.3936270776887	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCGTGATGTGCTTGC	1080	False	NA	8	True	AATAAA	-14	NA	167774266	167821303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167774477_167793875_167794000_167805547_167805619_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.5	chr2	+	4314	10	FSM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	-21	-1	-21	1	multi-exon	FALSE	canonical	1	2	junction_2	47.9021636666927	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGATGTGCTTGCCTT	1084	False	NA	11	True	AATAAA	-17	NA	167774270	167821306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.6	chr2	+	4040	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	26	147	-19	-147	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGGAAGAGTACCT	1086	False	NA	NA	False	AATAAA	-34	NA	167774272	167821158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.7	chr2	+	1870	10	FSM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	-7	2429	-7	2219	multi-exon	FALSE	canonical	1	2	junction_2	47.9021636666927	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGCAGGTTTTTGTTA	1098	False	NA	NA	False	AAAAAG	-31	NA	167774284	167818876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ES.20832.9	chr2	+	2222	2	NNC	ENSMUSG00000027540.14	novel	4213	9	NA	NA	25522	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGGCGTGATGTGCTT	NA	False	NA	6	True	AATAAA	-12	NA	167818489	167821301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167820647_167821236
ES.20833.1	chr2	-	176	1	Intergenic	novelGene_17229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATAGAATCTC	NA	False	NA	NA	False	NA	NA	NA	167866931	167866755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167866800_167866900
ES.20834.1	chr2	-	186	1	Intergenic	novelGene_17230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATATTGTGACTTGTG	NA	False	NA	-1	True	NA	NA	NA	167879868	167879682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167879700_167879900
ES.20835.1	chr2	+	155	1	Intergenic	novelGene_17231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	167899538	167899693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167899500_167899700
ES.20836.1	chr2	-	156	1	Intergenic	novelGene_17232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	167902633	167902477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167902500_167902600
ES.20837.1	chr2	+	3575	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-175	-1	-175	1	multi-exon	FALSE	canonical	3	144	junction_1	5.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTTGAAATTACAT	NA	False	NA	NA	False	AATAAA	-23	NA	167922748	167943124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167923280_167929261_167929485_167940303
ES.20837.3	chr2	+	3103	3	NNC	ENSMUSG00000044641.8	novel	3399	3	NA	NA	-144	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	76	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTGTTTGAAATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	167922779	167943122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167922841_167929261_167929485_167940303
ES.20837.4	chr2	+	3327	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	-38	110	-38	-110	multi-exon	FALSE	canonical	3	144	junction_1	5.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATTATAAAATGTACAT	NA	False	NA	80	True	ATTAAA	-20	NA	167922885	167943013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_167923280_167929261_167929485_167940303
ES.20837.7	chr2	+	7155	1	NIC	ENSMUSG00000044641.8	novel	3399	3	NA	NA	114	-12931	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	167923037	167930192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167923000_167930200
ES.20838.1	chr2	-	173	1	Intergenic	novelGene_17233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGAAAAGTACA	NA	False	NA	NA	False	NA	NA	NA	167947778	167947605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_167947600_167947800
ES.20839.1	chr2	+	5002	2	NNC	ENSMUSG00000118526.3	novel	577	8	NA	NA	2456	-49386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	167959252	167965198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_167962585_167963528
ES.20839.2	chr2	+	4078	1	Intergenic	novelGene_17234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	167961120	167965198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167961100_167965200
ES.20839.3	chr2	+	2052	1	Intergenic	novelGene_17235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACTGTCTCCTATGTG	NA	False	NA	NA	False	NA	NA	NA	167963003	167965055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167963000_167965100
ES.2084.1	chr1	-	1764	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACGGCTTATGACGGCT	NA	False	NA	NA	False	AATAAA	-38	NA	181396736	181394972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181395000_181396700
ES.20840.1	chr2	-	2042	2	Antisense	novelGene_ENSMUSG00000118526.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCCCTGCTGTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	167960444	167958245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_167960088_167960244
ES.20841.1	chr2	+	176	1	Intergenic	novelGene_17236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	167981858	167982034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167981900_167982000
ES.20842.1	chr2	+	777	1	NIC	ENSMUSG00000118526.3	novel	577	8	NA	NA	33480	-23531	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTGTAGTGTGTGTGC	NA	False	NA	NA	False	ATTAAA	-20	NA	167990276	167991053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_167990300_167991100
ES.20843.1	chr2	+	2567	1	Intergenic	novelGene_17237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATTTTGTATTACATT	NA	False	NA	NA	False	NA	NA	NA	167991116	167993683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167991100_167993700
ES.20844.1	chr2	-	4068	1	Genic_Genomic	ENSMUSG00000087648.2	novel	NA	NA	NA	NA	1334	3491	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCAGGTCAACACGTG	8463	False	NA	NA	False	AATAAA	-12	NA	167995099	167991031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_167991000_167995100
ES.20844.2	chr2	-	2134	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	4	-829	4	829	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTACCTTTTTTTTTT	7133	False	NA	NA	False	AATAAA	-9	NA	167996429	167993693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167995672_167996273
ES.20844.3	chr2	-	1248	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	62	-1	62	1	multi-exon	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTAGCTACTTTATTT	7191	False	NA	-3	True	NA	NA	NA	167996371	167994521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_167995672_167996273
ES.20844.4	chr2	-	596	4	NNC	ENSMUSG00000087648.2	novel	1309	2	NA	NA	52	-229	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.3708994574027	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAGGGGAACTGGTCA	7181	False	NA	NA	False	NA	NA	NA	167996381	167994751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_167994845_167994957_167995094_167995412_167995672_167996273
ES.20845.1	chr2	+	204	1	Intergenic	novelGene_17238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAATGCCATAACACAC	NA	False	NA	NA	False	NA	NA	NA	167999070	167999274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_167999100_167999300
ES.20846.1	chr2	-	217	1	Intergenic	novelGene_17239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCAATTCCCAA	7508	False	NA	NA	False	NA	NA	NA	168003199	168002982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168003000_168003200
ES.20847.1	chr2	+	2284	1	Intergenic	novelGene_17240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGTCTACAATCACAC	NA	False	NA	NA	False	NA	NA	NA	168015375	168017659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168015400_168017700
ES.20848.1	chr2	+	2254	1	Antisense	novelGene_ENSMUSG00000051149.16_AS_novelGene_ENSMUSG00000093752.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGACCAACCAACCAACCAA	NA	False	NA	NA	False	NA	NA	NA	168025792	168028046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168025800_168028000
ES.20849.1	chr2	+	5164	5	Antisense	novelGene_ENSMUSG00000078919.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATTACAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	168043869	168057629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168044121_168044366_168044559_168050700_168052555_168053283_168053401_168054879
ES.20849.2	chr2	+	1088	2	Antisense	novelGene_ENSMUSG00000078919.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGTCATGGTATCTC	NA	False	NA	NA	False	NA	NA	NA	168047962	168067132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168048063_168066144
ES.20849.3	chr2	+	7129	1	Antisense	novelGene_ENSMUSG00000078919.11_AS_novelGene_ENSMUSG00000093752.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATTACAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	168050500	168057629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168050500_168057600
ES.20849.4	chr2	+	4870	1	Antisense	novelGene_ENSMUSG00000078919.11_AS_novelGene_ENSMUSG00000093752.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTTGTAGACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	168050500	168055370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168050500_168055400
ES.20849.5	chr2	+	6400	2	Antisense	novelGene_ENSMUSG00000078919.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATTACAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	168050500	168057629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168052555_168053283
ES.2085.1	chr1	-	167	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAACTGTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	181530863	181530696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181530700_181530900
ES.20850.1	chr2	+	1916	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	-221	278	-221	-278	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATCACTTACATTCAT	NA	False	NA	27	True	ATTAAA	-38	NA	168072320	168074236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_168072300_168074200
ES.20850.2	chr2	+	1976	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	-10	7	-10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATATTGAGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	168072531	168074507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_168072500_168074500
ES.20850.3	chr2	+	1356	2	Genic_Genomic	ENSMUSG00000074576.5	novel	1973	1	NA	NA	1	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATATTGAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	168072542	168074506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168072599_168073206
ES.20851.1	chr2	-	5928	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-2	-994	-2	994	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATTTGCTTTTGGCT	2915	False	NA	NA	False	AATAAA	-17	NA	168049034	168021911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
ES.20851.11	chr2	-	5350	6	NNC	ENSMUSG00000051149.16	novel	4917	5	NA	NA	-181	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.9464820989642	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGCTTTTATTACAC	2736	False	NA	-3	True	AATAAA	-23	NA	168049213	168022907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168027093_168029486_168029580_168031201_168031315_168045445_168045510_168046519_168046695_168048493
ES.20851.12	chr2	-	5344	7	NNC	ENSMUSG00000051149.16	novel	4917	5	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5959978922166	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGCTTTTATTACA	2899	False	NA	-4	True	AATAAA	-22	NA	168049050	168022908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168027093_168029486_168029580_168031201_168031315_168039882_168039950_168040678_168040834_168046519_168046695_168048493
ES.20851.13	chr2	-	5281	12	FSM	ENSMUSG00000093752.2	ENSMUST00000138667.2	5288	12	4	3	4	-3	multi-exon	FALSE	canonical	2	6	junction_3	157.884464505636	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGCTTTTATTACA	NA	False	NA	-4	True	AATAAA	-22	NA	168072280	168022908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168052350_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.16	chr2	-	4979	5	NNC	ENSMUSG00000051149.16	novel	4932	4	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.916747494304	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATATTTGCTTTTATT	2930	False	NA	-7	True	AATAAA	-19	NA	168049019	168022911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168027093_168029486_168029580_168031201_168031318_168031511_168031575_168048493
ES.20851.17	chr2	-	4744	5	NNC	ENSMUSG00000051149.16	novel	4932	4	NA	NA	31	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.634180819204	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	2948	False	NA	-9	True	AATAAA	-17	NA	168049001	168022913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493_168048767_168048915
ES.20851.18	chr2	-	5588	2	ISM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	17947	8	17734	-8	3prime_fragment	FALSE	canonical	3	165	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	8517	False	NA	-9	True	AATAAA	-17	NA	168030895	168022913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168027093_168029486
ES.20851.19	chr2	-	4949	6	NNC	ENSMUSG00000051149.16	novel	4917	5	NA	NA	31	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.0973410695855	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	2948	False	NA	-9	True	AATAAA	-17	NA	168049001	168022913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493_168048823_168048941
ES.20851.2	chr2	-	4845	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	305	-218	-98	218	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCCCCTTTTGATAAGG	3222	False	NA	NA	False	AGTAAA	-16	NA	168048727	168022687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
ES.20851.20	chr2	-	4692	5	NNC	ENSMUSG00000051149.16	novel	4932	4	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.634180819204	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	3105	False	NA	-9	True	AATAAA	-17	NA	168048844	168022913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168024803_168024846_168027093_168029486_168029580_168031201_168031315_168048493
ES.20851.21	chr2	-	5789	1	Genic_Genomic	ENSMUSG00000051149.16	novel	NA	NA	NA	NA	-802	2231	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACTTTTAAATTGAGAA	2115	False	NA	NA	False	NA	NA	NA	168049834	168044045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_168044000_168049800
ES.20851.22	chr2	-	1768	2	Intergenic	novelGene_17241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACTTTTAAATTGAGAA	5887	False	NA	NA	False	NA	NA	NA	168046062	168044045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168044125_168044373
ES.20851.23	chr2	-	3161	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	21	-889	4	889	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCTGTATATATAGTC	NA	False	NA	NA	False	NA	NA	NA	168072278	168050078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.24	chr2	-	5131	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	2	880	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	152.387612275408	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACACTGAGCTGTCTGTA	NA	False	NA	NA	False	AATAAA	-40	NA	168072280	168050087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168056985_168059659_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.25	chr2	-	3232	9	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-789	-9	combination_of_known_junctions	FALSE	canonical	2	32	junction_2	140.419683449294	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACTATAATGTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	168073300	168050976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168053348_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.26	chr2	-	2262	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	19	12	2	-12	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCATAGGACTATAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	168072280	168050979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.27	chr2	-	2553	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	-1497	1237	-1285	-3	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168073796	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.28	chr2	-	2437	8	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	47	-3	intron_retention	FALSE	canonical	3	450	junction_2	5.67486401886892	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168072201	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.29	chr2	-	1036	9	FSM	ENSMUSG00000078919.11	ENSMUST00000109193.8	1076	9	36	4	36	-3	multi-exon	FALSE	canonical	2	8	junction_8	149.583118616373	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168072475	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072308
ES.20851.3	chr2	-	5311	5	FSM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	-373	-21	-183	21	multi-exon	FALSE	canonical	3	20	junction_3	74.0249113474647	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCTGTGTCTATTACA	2734	False	NA	20	True	NA	NA	NA	168049215	168022884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493
ES.20851.30	chr2	-	1030	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168072280	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059712_168061952_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.31	chr2	-	1034	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	151.85390800042	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168072280	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065072_168069322_168069423_168072112
ES.20851.32	chr2	-	1056	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168072302	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059720_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.33	chr2	-	2012	5	NNC	ENSMUSG00000078919.11	novel	538	3	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	234.086522465519	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	8631	False	NA	-23	True	AATAAA	-19	NA	168059647	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168055371_168057672_168057890_168058810
ES.20851.34	chr2	-	3237	2	FSM	ENSMUSG00000078919.11	ENSMUST00000136582.2	4959	2	1719	3	-989	-3	multi-exon	FALSE	canonical	3	459	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168056170	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285
ES.20851.35	chr2	-	2521	9	NNC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	-1282	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	149.583118616373	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGCTGCTTTCATT	NA	False	NA	-23	True	AATAAA	-19	NA	168073793	168052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069394_168072112
ES.20851.36	chr2	-	4153	1	NIC	ENSMUSG00000093752.2	novel	5288	12	NA	NA	15926	-29300	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTGCTGCTTTCAT	NA	False	NA	-24	True	AATAAA	-18	NA	168056358	168052205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052200_168056400
ES.20851.37	chr2	-	982	9	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	2	32	junction_2	140.419683449294	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTTGCTGCTTTCA	NA	False	NA	-25	True	AATAAA	-17	NA	168072280	168052206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168053348_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.38	chr2	-	2300	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	-1434	1427	-1222	41	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACTGATTTTTATCAAT	NA	False	NA	-6	True	ATTAAA	-15	NA	168073733	168052394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.39	chr2	-	1631	9	FSM	ENSMUSG00000078919.11	ENSMUST00000109193.8	1076	9	-790	235	-790	0	multi-exon	FALSE	canonical	2	8	junction_8	149.583118616373	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168073301	168052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072308
ES.20851.4	chr2	-	5129	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	-185	-12	-185	12	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACACGACAGTCCTGTG	2732	False	NA	11	True	AATAAA	-37	NA	168049217	168022893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
ES.20851.40	chr2	-	2249	8	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	450	junction_3	8.70139561876632	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072280	168052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.41	chr2	-	798	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072278	168052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059713_168061952_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.42	chr2	-	3496	8	ISM	ENSMUSG00000078919.11	ENSMUST00000109193.8	1076	9	231	235	2	0	3prime_fragment	FALSE	canonical	3	450	junction_3	9.05313115300278	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168072280	168052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322
ES.20851.43	chr2	-	1865	8	NNC	ENSMUSG00000078919.11	novel	722	8	NA	NA	-837	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	161.63438207692	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCCCGTGTTCATTTC	NA	False	NA	-14	True	CATAAA	-16	NA	168073348	168052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059714_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.44	chr2	-	638	7	NIC	ENSMUSG00000078919.11	novel	2293	9	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	170.974088355192	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTCCCGTGTTCATTT	NA	False	NA	-15	True	CATAAA	-15	NA	168072278	168052436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168053401_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.45	chr2	-	610	6	NIC	ENSMUSG00000078919.11	novel	722	8	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	184.141684580108	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTCCCGTGTTCATT	NA	False	NA	-16	True	CATAAA	-14	NA	168072277	168052437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168052557_168053285_168053401_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ES.20851.47	chr2	-	2912	1	Genic_Genomic	ENSMUSG00000078919.11_ENSMUSG00000093752.2	novel	NA	NA	NA	NA	-1282	-9004	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGATGTGTGGTGCG	NA	False	NA	NA	False	AATAAA	-20	NA	168073793	168070881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_168070900_168073800
ES.20851.48	chr2	-	2166	1	Genic_Genomic	ENSMUSG00000078919.11_ENSMUSG00000093752.2	novel	NA	NA	NA	NA	-1180	-9648	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTCCGAACTAAACAGTA	NA	False	NA	NA	False	AAGAAA	-11	NA	168073691	168071525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_168071500_168073700
ES.20851.5	chr2	-	4723	2	NIC	ENSMUSG00000051149.16	novel	4932	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2920	False	NA	-1	True	AATAAA	-25	NA	168049029	168022905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168027093_168048493
ES.20851.6	chr2	-	6707	3	ISM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	15214	0	15001	0	3prime_fragment	FALSE	canonical	3	165	junction_1	7.5	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	5784	False	NA	-1	True	AATAAA	-25	NA	168033628	168022905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168027093_168029486_168029580_168031201
ES.20851.8	chr2	-	4836	3	FSM	ENSMUSG00000051149.16	ENSMUST00000139984.8	434	3	-420	-3982	-17	0	multi-exon	FALSE	canonical	3	12	junction_2	76.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2900	False	NA	-1	True	AATAAA	-25	NA	168049049	168022905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168027093_168029486_168029580_168048493
ES.20852.1	chr2	+	2788	2	Intergenic	novelGene_17242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTTGAGTTGGGGCAA	181	False	NA	NA	False	NA	NA	NA	168078935	168082326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168079634_168080236
ES.20853.1	chr2	-	4098	3	FSM	ENSMUSG00000074575.5	ENSMUST00000109191.2	4089	3	-4	-5	-4	5	multi-exon	FALSE	canonical	1	2	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGGTGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	168123056	168102031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168105071_168110388_168111189_168122797
ES.20854.1	chr2	-	281	1	Intergenic	novelGene_17243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGACAGGGTTTCTCT	NA	False	NA	NA	False	AATAAA	-38	NA	168153071	168152790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168152800_168153100
ES.20854.2	chr2	-	90	2	Intergenic	novelGene_17244	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAATATCTAATA	NA	False	NA	NA	False	AATAAA	-20	NA	168153070	168152833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168152884_168153030
ES.20855.1	chr2	+	2285	3	Intergenic	novelGene_17245	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTGGATTGGACAGAGT	NA	False	NA	NA	False	NA	NA	NA	168153187	168158314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168153273_168154508_168154636_168156241
ES.20855.2	chr2	+	456	1	Intergenic	novelGene_17246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTCAAGAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	168153210	168153666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168153200_168153700
ES.20855.3	chr2	+	580	4	Intergenic	novelGene_17247	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGCTTTGTGTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	168153225	168161510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168153273_168154478_168154636_168157888_168158051_168161296
ES.20855.4	chr2	+	713	1	Intergenic	novelGene_17249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCTTTGTGTGTTTTCC	1716	False	NA	NA	False	AATAAA	-32	NA	168160799	168161512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168160800_168161500
ES.20856.1	chr2	-	1157	2	Intergenic	novelGene_17248	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTTCTTTCTTTCTT	8633	False	NA	NA	False	AATACA	-16	NA	168175483	168155636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168156537_168175226
ES.20857.1	chr2	-	203	1	Intergenic	novelGene_17250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGGGGCTGGGGA	6202	False	NA	NA	False	NA	NA	NA	168224924	168224721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168224700_168224900
ES.20858.1	chr2	+	189	1	Intergenic	novelGene_17251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATCACTAGGCATCTG	NA	False	NA	NA	False	NA	NA	NA	168226105	168226294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168226100_168226300
ES.20859.1	chr2	+	2074	1	Intergenic	novelGene_17252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTGTATGGAAGCT	4115	False	NA	NA	False	GATAAA	-29	NA	168235379	168237453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168235400_168237500
ES.20859.2	chr2	+	678	2	Intergenic	novelGene_17253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTACTTCTTGTCTGGT	5315	False	NA	NA	False	NA	NA	NA	168236579	168244712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168236722_168244176
ES.2086.1	chr1	-	179	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTCGC	NA	False	NA	NA	False	NA	NA	NA	181636258	181636079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181636100_181636300
ES.20860.1	chr2	-	159	1	Intergenic	novelGene_17254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	168284985	168284826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168284800_168285000
ES.20861.1	chr2	-	4280	3	ISM	ENSMUSG00000027544.17	ENSMUST00000151292.8	5399	9	47478	-3	47478	0	3prime_fragment	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTGTGTCTGCTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	168346718	168318329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168322170_168328605_168328692_168346364
ES.20862.1	chr2	+	184	1	Intergenic	novelGene_17255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTAAAGGGCTGCAA	NA	False	NA	NA	False	NA	NA	NA	168474382	168474566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168474400_168474600
ES.20863.1	chr2	+	203	1	Intergenic	novelGene_17256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTGGCCTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	168527518	168527721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168527500_168527700
ES.20864.1	chr2	+	185	1	Intergenic	novelGene_17258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGTTTAAA	2463	False	NA	NA	False	NA	NA	NA	168551516	168551701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168551500_168551700
ES.20865.1	chr2	-	3841	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	-130	-20	41	20	multi-exon	TRUE	canonical	3	157	junction_27	35.3190436202576	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGTCTTGTCACAGGT	6331	False	NA	-3	True	GATAAA	-36	NA	168584012	168476337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.10	chr2	-	3376	27	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-9584	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	59.737356613328	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6970	False	NA	-23	True	GATAAA	-16	NA	168564466	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168564355
ES.20865.11	chr2	-	3660	29	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-9586	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	75.2098679342936	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6968	False	NA	-24	True	GATAAA	-15	NA	168564468	168476358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168563385_168563524_168564355
ES.20865.12	chr2	-	3485	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	367	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	58.804131878006	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	6990	False	NA	-24	True	GATAAA	-15	NA	168583353	168476358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583277
ES.20865.13	chr2	-	3632	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	70	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.7151532837505	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGCTTTTCATTT	NA	False	NA	-24	True	GATAAA	-15	NA	168576189	168476358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481050_168481829_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.14	chr2	-	3566	27	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	96	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	69.6175945250597	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168576163	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.17	chr2	-	3134	25	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	14632	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	61.7987184108394	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168540201	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168540107
ES.20865.18	chr2	-	2617	16	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	76.6958205438138	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	2930	False	NA	-25	True	GATAAA	-14	NA	168512337	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511903
ES.20865.19	chr2	-	3495	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	5206	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	58.804131878006	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	383	False	NA	-25	True	GATAAA	-14	NA	168571053	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168570966
ES.20865.20	chr2	-	2905	22	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-19004	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	66.1012759695852	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168531270	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168525632_168525714_168529260_168529356_168531218
ES.20865.21	chr2	-	3730	28	NNC	ENSMUSG00000027546.16	novel	3691	28	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	61.9033717566519	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	6418	False	NA	-25	True	GATAAA	-14	NA	168583925	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496183_168503844_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.22	chr2	-	3533	28	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	43	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_27	58.3027433020369	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168554790	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168554665
ES.20865.23	chr2	-	2602	16	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-72	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	72.489508819476	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	2929	False	NA	-25	True	GATAAA	-14	NA	168512338	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511919
ES.20865.27	chr2	-	3105	25	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	17609	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	61.6206472431657	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168537224	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168537159
ES.20865.28	chr2	-	3198	25	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	13339	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	62.1552575545035	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	False	NA	-25	True	GATAAA	-14	NA	168541494	168476359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168541336
ES.20865.3	chr2	-	3751	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	-20	-2	-20	2	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGGCTTTTCATTTTTA	NA	False	NA	-21	True	GATAAA	-18	NA	168576279	168476355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.30	chr2	-	3462	26	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	15549	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	80.0495446582927	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	NA	False	NA	-26	True	GATAAA	-13	NA	168539284	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168537966_168538109_168539003
ES.20865.32	chr2	-	3717	30	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-9586	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	88.0412426325334	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	6968	False	NA	-26	True	GATAAA	-13	NA	168564468	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168556211_168556271_168563385_168563524_168564355
ES.20865.33	chr2	-	3671	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	96	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	69.3148123410613	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	NA	False	NA	-26	True	GATAAA	-13	NA	168576163	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547193_168548114_168548229_168552751_168552897_168575940
ES.20865.34	chr2	-	2334	16	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	262	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	75.9925142512223	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	3263	False	NA	-26	True	GATAAA	-13	NA	168512004	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511852
ES.20865.35	chr2	-	3357	27	NIC	ENSMUSG00000027546.16	novel	3529	28	NA	NA	24	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	59.737356613328	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	6647	False	NA	-26	True	GATAAA	-13	NA	168583696	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168583601
ES.20865.36	chr2	-	3256	24	NNC	ENSMUSG00000027546.16	novel	3691	28	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	66.5021852477204	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGCAGGCTTTTCAT	6451	False	NA	-26	True	GATAAA	-13	NA	168583892	168476360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485893_168494485_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.37	chr2	-	3225	27	NIC	ENSMUSG00000027546.16	novel	3529	28	NA	NA	96	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	59.2844037883859	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGGTTGCAGGCTTTTCA	6719	False	NA	-27	True	GATAAA	-12	NA	168583624	168476361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.38	chr2	-	3146	25	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	15721	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_24	61.0872412347019	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGGTTGCAGGCTTTTC	NA	False	NA	-28	True	GATAAA	-11	NA	168539112	168476362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168539003
ES.20865.40	chr2	-	3676	28	NNC	ENSMUSG00000027546.16	novel	3691	28	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	62.166068135558	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGGTTGCAGGCTTTTC	6463	False	NA	-28	True	GATAAA	-11	NA	168583880	168476362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531226_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.41	chr2	-	3504	27	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	75	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	59.737356613328	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGGTTGCAGGCTTTTC	NA	False	NA	-28	True	GATAAA	-11	NA	168576184	168476362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168575940
ES.20865.42	chr2	-	2838	15	NNC	ENSMUSG00000027546.16	novel	2484	14	NA	NA	92	1942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.0841085112319	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	168576167	168507056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168508184_168509879_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.44	chr2	-	2083	9	NNC	ENSMUSG00000027546.16	novel	2484	14	NA	NA	-13575	1942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.633851012582	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	168525841	168507056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168508184_168509879_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168525795
ES.20865.45	chr2	-	2872	15	NNC	ENSMUSG00000027546.16	novel	2484	14	NA	NA	20	1942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.7293666556197	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	6481	False	NA	NA	False	NA	NA	NA	168583862	168507056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168508184_168509879_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.46	chr2	-	2409	14	ISM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	1	32642	1	-1	5prime_fragment	FALSE	canonical	2	6	junction_13	69.560326719003	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGTGTGTTTATTATT	6291	False	NA	NA	False	AAGAAA	-17	NA	168584052	168508999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
ES.20865.47	chr2	-	2727	14	FSM	ENSMUSG00000027546.16	ENSMUST00000140188.8	2484	14	-244	1	-80	-1	multi-exon	FALSE	canonical	3	157	junction_13	32.0469330382763	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGTGTGTTTATTATT	6379	False	NA	NA	False	AAGAAA	-17	NA	168583964	168508999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.48	chr2	-	2595	14	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	88	32642	88	-1	5prime_fragment	FALSE	canonical	3	71	junction_13	52.9239713699013	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGTGTGTTTATTATT	NA	False	NA	NA	False	AAGAAA	-17	NA	168576171	168508999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.5	chr2	-	3664	29	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	75.9280926607671	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168576135	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168556211_168556271_168575940
ES.20865.50	chr2	-	1439	8	ISM	ENSMUSG00000027546.16	ENSMUST00000140188.8	2484	14	-154	16123	8	7783	5prime_fragment	FALSE	canonical	3	157	junction_7	36.2091430555368	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAATGGCCTGCGTTCT	6469	False	NA	NA	False	ATTAAA	-19	NA	168583874	168525121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.51	chr2	-	1426	8	ISM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	52	48771	52	7776	5prime_fragment	FALSE	canonical	3	71	junction_7	64.9426748787588	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAGTTAAATGGCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	168576207	168525128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20865.52	chr2	-	181	1	Intergenic	novelGene_17257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACACAAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	168549814	168549633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168549600_168549800
ES.20865.53	chr2	-	158	1	Intergenic	novelGene_17259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	8301	False	NA	NA	False	NA	NA	NA	168563135	168562977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168563000_168563100
ES.20865.54	chr2	-	2225	1	Genic_Genomic	ENSMUSG00000027546.16	novel	NA	NA	NA	NA	-41	-34554	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAAACAACAA	6418	False	NA	NA	False	NA	NA	NA	168583925	168581700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_168581700_168583900
ES.20865.6	chr2	-	2876	22	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-13569	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	65.0539284397351	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168525835	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168525795
ES.20865.7	chr2	-	3771	27	NIC	ENSMUSG00000027546.16	novel	3691	28	NA	NA	11	0	intron_retention	FALSE	canonical	3	157	junction_26	35.9047886242747	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6472	False	NA	-23	True	GATAAA	-16	NA	168583871	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ES.20865.8	chr2	-	3469	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	-13	0	-13	0	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6277	False	NA	-23	True	GATAAA	-16	NA	168584066	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
ES.20865.9	chr2	-	3619	28	NNC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	69.3546580058299	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168576163	168476357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532899_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ES.20866.1	chr2	+	3695	2	Antisense	novelGene_ENSMUSG00000027547.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGATGAAGACAGGGTC	8202	False	NA	NA	False	NA	NA	NA	168587578	168591389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168589246_168589361
ES.20866.2	chr2	+	1556	1	Antisense	novelGene_ENSMUSG00000027547.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAATAAAGCAGATTC	NA	False	NA	NA	False	AATAAA	-41	NA	168590334	168591890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168590300_168591900
ES.20867.1	chr2	-	5035	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	38	5138	intron_retention	TRUE	non_canonical	0	0	junction_1	258.588959547773	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGATGCCTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	168609083	168585113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168585122_168590259_168592381_168594373_168594661_168596353_168598721_168608831
ES.20867.10	chr2	-	3773	4	FSM	ENSMUSG00000027547.18	ENSMUST00000103074.2	3741	4	-35	3	-35	-3	multi-exon	FALSE	canonical	3	42	junction_2	261.72037665332	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609156	168590254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168592381_168594373_168594661_168597685_168598721_168608831
ES.20867.11	chr2	-	4411	6	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-82	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	281.351452813025	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609203	168590254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168597050_168597685_168598035_168598139_168598721_168608831
ES.20867.12	chr2	-	3204	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_1	258.588959547773	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168609042	168590254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168590453_168592239_168592381_168594373_168594661_168596353_168598721_168608831
ES.20867.13	chr2	-	5062	4	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	183	-3	intron_retention	FALSE	canonical	0	0	junction_3	292.570599267178	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168608766	168590254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598721_168608484
ES.20867.14	chr2	-	4895	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-68	-4	intron_retention	FALSE	canonical	0	0	junction_3	293.842113217285	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168607234	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598035_168598139_168598721_168607013
ES.20867.15	chr2	-	5042	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-176	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	293.842113217285	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168607342	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168590877_168590942_168592381_168594373_168594661_168596353_168598721_168607013
ES.20867.16	chr2	-	4661	3	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	37	-4	intron_retention	FALSE	canonical	2	28	junction_1	252	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168609000	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168592381_168596353_168598721_168608831
ES.20867.17	chr2	-	4492	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	34	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	258.588959547773	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168609003	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598005_168598463_168598721_168608831
ES.20867.18	chr2	-	4857	4	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	38	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	292.570599267178	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168608999	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598721_168608921
ES.20867.19	chr2	-	4994	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-43	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	258.588959547773	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168609164	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598371_168598488_168598721_168608831
ES.20867.2	chr2	-	5180	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	-105	-2	-105	2	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCTTGTGTGTATGCTTT	NA	False	NA	-15	True	AATAAA	-24	NA	168609226	168590249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
ES.20867.20	chr2	-	6940	3	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	38	-4	intron_retention	FALSE	canonical	3	532	junction_2	30.5	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGCGGGCTTGTGTGTA	NA	False	NA	-21	True	AATAAA	-18	NA	168608999	168590255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168594661_168596353_168598721_168608831
ES.20867.21	chr2	-	3936	4	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	18	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	292.570599267178	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCGGGCTTGTGTGT	NA	False	NA	-22	True	AATAAA	-17	NA	168609019	168590256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168597730_168608870
ES.20867.22	chr2	-	3998	3	NNC	ENSMUSG00000027547.18	novel	328	3	NA	NA	-17	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	266	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGAGGCGGGCTTGTGTG	NA	False	NA	-23	True	AATAAA	-16	NA	168609054	168590257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592182_168596869_168598721_168608831
ES.20867.23	chr2	-	4538	5	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	258.588959547773	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGAGGCGGGCTTGTG	NA	False	NA	-25	True	AATAAA	-14	NA	168609066	168590259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168597050_168597521_168598721_168608831
ES.20867.24	chr2	-	3634	2	ISM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	-91	5216	-91	1367	5prime_fragment	FALSE	canonical	3	532	junction_1	0	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCTCTGTTTTCTTT	NA	False	NA	0	True	CATAAA	-22	NA	168609212	168595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168598721_168608831
ES.20867.25	chr2	-	3580	2	FSM	ENSMUSG00000027547.18	ENSMUST00000137536.2	773	2	-175	-2632	-175	1366	multi-exon	FALSE	canonical	3	69	junction_1	0	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGAGCCTCTGTTTTCTT	NA	False	NA	-1	True	CATAAA	-21	NA	168607341	168595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168598721_168607013
ES.20867.3	chr2	-	4529	5	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	240.637694470339	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609213	168590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168592381_168594373_168594661_168596353_168597050_168597685_168598721_168608831
ES.20867.4	chr2	-	6114	4	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	605	0	intron_retention	FALSE	canonical	3	69	junction_3	260.140133176119	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168608344	168590251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607013
ES.20867.5	chr2	-	4976	4	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_3	292.570599267178	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGGCTTGTGTGTATGC	NA	False	NA	-18	True	AATAAA	-21	NA	168609030	168590252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598712_168608827
ES.20867.6	chr2	-	5375	5	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	707	-1	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	282.510508654103	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGGCTTGTGTGTATGC	NA	False	NA	-18	True	AATAAA	-21	NA	168608242	168590252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168592381_168594373_168594661_168596353_168597050_168597685_168598721_168607013
ES.20867.7	chr2	-	4854	4	NNC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	-207	-2	intron_retention	FALSE	canonical	3	6	junction_3	289.749700412078	939	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGGCTTGTGTGTATG	NA	False	NA	-19	True	AATAAA	-20	NA	168607373	168590253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168592381_168594373_168594661_168596353_168598721_168607300
ES.20867.8	chr2	-	3749	4	NIC	ENSMUSG00000027547.18	novel	3741	4	NA	NA	-148	-3	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	278.111488435843	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGGGCTTGTGTGTAT	NA	False	NA	-20	True	AATAAA	-19	NA	168607314	168590254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168592381_168594373_168594661_168597685_168598721_168607013
ES.20868.1	chr2	-	170	1	Intergenic	novelGene_17260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAACCCTGAA	NA	False	NA	NA	False	NA	NA	NA	168617710	168617540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168617500_168617700
ES.20869.1	chr2	-	182	1	Intergenic	novelGene_17261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168631511	168631329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168631300_168631500
ES.2087.1	chr1	+	4625	1	Antisense	novelGene_ENSMUSG00000004880.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCCAAGCTCCATCTG	NA	False	NA	NA	False	NA	NA	NA	181662854	181667479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181662900_181667500
ES.20870.1	chr2	+	279	1	Intergenic	novelGene_17262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAGGTCAAGGAAAGGT	NA	False	NA	NA	False	NA	NA	NA	168633584	168633863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168633600_168633900
ES.20871.1	chr2	-	144	1	Intergenic	novelGene_17263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAATGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	168652729	168652585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168652600_168652700
ES.20872.1	chr2	+	124	1	Intergenic	novelGene_17264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	168657305	168657429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168657300_168657400
ES.20873.1	chr2	-	174	1	Intergenic	novelGene_17265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTATTTATA	9867	False	NA	NA	False	NA	NA	NA	168660228	168660054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168660100_168660200
ES.20874.1	chr2	+	179	1	Intergenic	novelGene_17266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTAAGTGGG	NA	False	NA	NA	False	NA	NA	NA	168664723	168664902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168664700_168664900
ES.20875.1	chr2	+	179	1	Intergenic	novelGene_17267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	5483	False	NA	NA	False	NA	NA	NA	168676000	168676179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168676000_168676200
ES.20876.1	chr2	+	251	1	Intergenic	novelGene_17268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTGGGTCAGTTCCT	6048	False	NA	NA	False	NA	NA	NA	168676565	168676816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168676600_168676800
ES.20877.1	chr2	-	167	1	Intergenic	novelGene_17269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	168678409	168678242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168678200_168678400
ES.20878.1	chr2	-	3075	1	Intergenic	novelGene_17270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	168682916	168679841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168679800_168682900
ES.20879.1	chr2	+	1972	1	Intergenic	novelGene_17271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	168685168	168687140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168685200_168687100
ES.2088.1	chr1	+	178	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181682701	181682879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181682700_181682900
ES.20880.1	chr2	-	389	1	Intergenic	novelGene_17272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAGAGCATTTTGACCAT	2338	False	NA	NA	False	NA	NA	NA	168720210	168719821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168719800_168720200
ES.20881.1	chr2	+	512	1	Intergenic	novelGene_17274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	168771734	168772246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168771700_168772200
ES.20882.1	chr2	+	176	1	Intergenic	novelGene_17276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4704	False	NA	NA	False	NA	NA	NA	168783336	168783512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168783300_168783500
ES.20883.1	chr2	+	217	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAAACATGTGACATTT	NA	False	NA	NA	False	AATGAA	-16	NA	168792880	168793097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168792900_168793100
ES.20884.1	chr2	+	2891	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCCCTTGTTTTTCTA	NA	False	NA	NA	False	AATATA	-13	NA	168797274	168800165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168797300_168800200
ES.20884.2	chr2	+	243	1	Intergenic	novelGene_17277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTTTTTTGAGTTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	168798183	168798426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168798200_168798400
ES.20885.1	chr2	-	2564	9	FSM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	280	4	-18	-4	multi-exon	FALSE	canonical	3	7	junction_4	271.408824469655	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGATGTGAGCGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	168797227	168735254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.10	chr2	-	2820	7	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	256.391898381278	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTGTATTGTATAGT	NA	False	NA	-2	True	AATAAA	-27	NA	168797507	168767282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793129_168793199_168793464_168793699_168797038
ES.20885.12	chr2	-	2593	7	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.141824307665	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGTTTGTATTGTATAG	NA	False	NA	-3	True	AATAAA	-26	NA	168797185	168767283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768854_168776537_168776703_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.13	chr2	-	2730	6	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.667424241201	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTATAGTTTGTATTGTAT	NA	False	NA	-5	True	AATAAA	-24	NA	168797506	168767285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768837_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.14	chr2	-	2487	6	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	-41	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	211.994716915304	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTATAGTTTGTATTGT	NA	False	NA	-7	True	AATAAA	-22	NA	168797250	168767287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793693_168797034
ES.20885.15	chr2	-	2500	6	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	191	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	211.241662557366	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGTATAGTTTGTATTG	NA	False	NA	-8	True	AATAAA	-21	NA	168796995	168767288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168796771
ES.20885.17	chr2	-	2168	5	NIC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	262.173129820735	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGTATAGTTTGTAT	NA	False	NA	-10	True	AATAAA	-19	NA	168797184	168767290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168768854_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.18	chr2	-	2415	6	NNC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	211.994716915304	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCGTATAGTTTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	168797191	168767291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793693_168797043
ES.20885.2	chr2	-	2125	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	-65	-8	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGAGGGATGTGAGCG	NA	False	NA	NA	False	AATAAA	-14	NA	168754618	168735258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
ES.20885.20	chr2	-	2184	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	39	215	33	-215	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTTATGTAATTTTT	NA	False	NA	NA	False	TATAAA	-13	NA	168797153	168767495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.21	chr2	-	2383	1	Intergenic	novelGene_17273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAAGCAGCTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	168771986	168769603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168769600_168772000
ES.20885.22	chr2	-	1361	1	Intergenic	novelGene_17275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGAGGGGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	168773313	168771952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168772000_168773300
ES.20885.23	chr2	-	1874	5	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	7	8834	1	618	5prime_fragment	FALSE	canonical	3	472	junction_1	66.5187943366384	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	168797185	168776114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.25	chr2	-	1081	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	-73	1	-73	-1	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTACTGTTGTTACCAT	NA	False	NA	-2	True	TATAAA	-18	NA	168797282	168776733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.26	chr2	-	1297	5	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-42	9460	-25	-8	5prime_fragment	FALSE	canonical	3	472	junction_1	66.5187943366384	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTGTTACTGTTG	NA	False	NA	-9	True	TATAAA	-11	NA	168797234	168776740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.27	chr2	-	2345	4	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	-297	3740	1	-3740	5prime_fragment	FALSE	canonical	3	552	junction_1	42.967688118192	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	168797506	168780472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.28	chr2	-	5027	3	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	-297	4398	1	-4398	intron_retention	FALSE	canonical	3	552	junction_1	19	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	168797506	168781130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168781954_168782656_168782819_168793464
ES.20885.3	chr2	-	983	4	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	3	-6333	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	6.18241233033047	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGTTTGTTTGGGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	168754550	168741583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168741957_168748003_168748067_168748759_168748910_168754153
ES.20885.4	chr2	-	1407	8	ISM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	355	6337	34	-6337	5prime_fragment	FALSE	canonical	3	7	junction_3	268.278563726404	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAATGTGGTTTGTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	168797152	168741587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.5	chr2	-	2424	1	Genic_Genomic	ENSMUSG00000027551.16	novel	NA	NA	NA	NA	-13293	1858	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168767846	168765422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_168765400_168767800
ES.20885.6	chr2	-	4185	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-7	-1740	-7	1740	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAAAGCTCTGAGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	168797199	168765540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.7	chr2	-	7211	5	NIC	ENSMUSG00000027551.16	novel	2438	6	NA	NA	50	0	intron_retention	FALSE	canonical	3	382	junction_1	101.197826063607	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168797457	168767280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_168768854_168777130_168781954_168782656_168782819_168793464_168793699_168797038
ES.20885.8	chr2	-	3269	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	-832	1	-517	-1	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTGTATTGTATAGTT	NA	False	NA	-1	True	AATAAA	-28	NA	168798024	168767281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ES.20886.1	chr2	+	1858	1	Intergenic	novelGene_17282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTGGTCAGCATTCC	NA	False	NA	NA	False	NA	NA	NA	168810093	168811951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168810100_168812000
ES.20887.1	chr2	-	1491	4	Intergenic	novelGene_17278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	4.64279609239471	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCTGTGTCAGCTCCT	NA	False	NA	0	True	AATAAA	-12	NA	168812194	168802177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168803291_168807365_168807476_168807895_168807975_168812005
ES.20887.2	chr2	-	1559	4	Intergenic	novelGene_17279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	4.49691252107735	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATCTGTGTCAGCTCC	NA	False	NA	-1	True	AATAAA	-11	NA	168812165	168802178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168803389_168807365_168807476_168807895_168807975_168812005
ES.20887.3	chr2	-	1422	3	Intergenic	novelGene_17280	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACATCTGTGTCAGCTC	NA	False	NA	-2	True	AATAAA	-10	NA	168812068	168802179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168803291_168807895_168808144_168812005
ES.20887.4	chr2	-	1130	4	Intergenic	novelGene_17281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATATGTATATATATA	NA	False	NA	NA	False	AATAAA	-15	NA	168812287	168805807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168806372_168807365_168807476_168807800_168807975_168812005
ES.20888.1	chr2	+	5500	4	Antisense	novelGene_ENSMUSG00000086658.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTTGTCCGCTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	168822943	168832868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168823663_168823994_168824158_168828053_168828175_168828371
ES.20888.2	chr2	+	1801	4	Antisense	novelGene_ENSMUSG00000086658.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGGAAGAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	168823066	168829292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168823663_168823994_168824158_168828053_168828175_168828371
ES.20888.3	chr2	+	8613	1	Antisense	novelGene_ENSMUSG00000086658.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTCTGATACAATTCT	NA	False	NA	NA	False	AATAAA	-20	NA	168823990	168832603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168824000_168832600
ES.20888.4	chr2	+	7727	1	Antisense	novelGene_ENSMUSG00000086658.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTTGTCCGCTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	168825141	168832868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_168825100_168832900
ES.20889.1	chr2	+	443	1	Intergenic	novelGene_17283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	168838962	168839405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168839000_168839400
ES.2089.1	chr1	-	4784	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	0	-1274	0	1274	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTGGTCCTGGTGTTGC	NA	False	NA	NA	False	AATAAA	-23	NA	181669944	181641625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.10	chr1	-	3476	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-8	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	582.763595434088	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669952	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646475_181646536_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.101	chr1	-	3163	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	-36	383	-36	-362	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGTGTACATTTGGG	NA	False	NA	NA	False	AGTAAA	-17	NA	181669980	181643282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.102	chr1	-	2766	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	-16	760	-16	-739	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTTTTTGAGTAACA	NA	False	NA	NA	False	TATAAA	-23	NA	181669960	181643659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.103	chr1	-	2449	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	53	1008	0	-987	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATATGGTAACTTTTGA	NA	False	NA	NA	False	TATAAA	-20	NA	181669891	181643907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.104	chr1	-	2617	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	-299	1192	181	-1171	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTTTAAGTCAGTTT	NA	False	NA	NA	False	ATTAAA	-32	NA	181670243	181644091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.106	chr1	-	1409	9	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	3	-1178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	729.21893146023	2059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAATTCTCTTTAAG	NA	False	NA	NA	False	ATTAAA	-25	NA	181669941	181644098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649088_181665976_181666122_181669852
ES.2089.107	chr1	-	2296	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-5	-1187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	797.458796769074	2059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGCTTAGAACAGAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	181669949	181644107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647434_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659295_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.108	chr1	-	2118	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	73	1319	20	-1298	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTTAACTTTTATT	NA	False	NA	NA	False	NA	NA	NA	181669871	181644218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.109	chr1	-	2046	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	17	1447	-1	-1426	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTAGGTTTGTT	NA	False	NA	NA	False	AATGAA	-17	NA	181669927	181644346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.11	chr1	-	3437	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-13	20	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	803.549971198442	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669904	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648267_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663646_181663854_181665942_181666122_181669852
ES.2089.110	chr1	-	588	3	ISM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	27	20610	9	113	5prime_fragment	FALSE	canonical	3	2209	junction_1	121	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAATGGTTTTTGTTT	NA	False	NA	NA	False	AATAGA	-24	NA	181669917	181663509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181663854_181665942_181666122_181669852
ES.2089.111	chr1	-	1439	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATTAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	181672884	181671445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181671400_181672900
ES.2089.112	chr1	-	170	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	181684026	181683856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181683900_181684000
ES.2089.113	chr1	-	5046	3	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	NA	False	NA	NA	False	NA	NA	NA	181693893	181685236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181689884_181691282_181691485_181693696
ES.2089.12	chr1	-	3967	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	65	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	758.031728914309	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669826	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181669400
ES.2089.14	chr1	-	3528	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-5	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	601.164461740023	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669949	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647434_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.15	chr1	-	4080	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	401	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	592.565977651284	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669490	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181668847
ES.2089.16	chr1	-	5067	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	1	19	intron_retention	FALSE	canonical	3	1956	junction_4	153.605429914354	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669943	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.18	chr1	-	3500	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	5	19	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_11	602.250031624504	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669939	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663646_181663854_181665942_181666122_181669852
ES.2089.20	chr1	-	3327	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	5	19	combination_of_known_splicesites	FALSE	canonical	1	20	junction_8	618.495261816038	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669939	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.21	chr1	-	3596	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-23244	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	592.565977651284	2097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181693855	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181693696
ES.2089.24	chr1	-	7172	13	ISM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	88	-19	35	19	intron_retention	FALSE	canonical	3	1956	junction_6	140.360522900454	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669856	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942
ES.2089.28	chr1	-	8188	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-7	19	intron_retention	FALSE	canonical	3	1975	junction_5	138.141800425481	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669951	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.29	chr1	-	3730	12	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-3949	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	639.986079394061	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181660668	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181659965
ES.2089.3	chr1	-	4505	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	28	-1023	10	1023	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGTCTTGGACAGTATT	NA	False	NA	NA	False	NA	NA	NA	181669916	181641876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.32	chr1	-	3331	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-14	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669905	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643773_181643931_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.35	chr1	-	4208	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	5	19	intron_retention	FALSE	canonical	3	1956	junction_5	147.995190424854	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTGCCACAGCTTTG	NA	False	NA	-31	True	AATAAA	-20	NA	181669939	181642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.39	chr1	-	4429	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	10	17	intron_retention	FALSE	canonical	3	1956	junction_4	153.300817009786	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669916	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644953_181645053_181645135_181646404_181646574_181647428_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.4	chr1	-	3962	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	-401	-51	79	51	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATGGCCAACTCTCTG	NA	False	NA	1	True	NA	NA	NA	181670345	181642848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.40	chr1	-	4829	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-13	17	intron_retention	FALSE	canonical	3	1997	junction_2	133.194383521427	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669904	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.41	chr1	-	3470	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	17	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	802.942340624072	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669909	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645113_181646400_181646570_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.42	chr1	-	3446	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669928	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643507_181643571_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.43	chr1	-	3433	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	11	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669915	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644008_181644072_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.44	chr1	-	3445	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-16	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669907	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643555_181643599_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.46	chr1	-	3755	16	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-14	17	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	865.539328331699	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669958	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181668064_181668176_181669852
ES.2089.47	chr1	-	4365	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-1	17	intron_retention	FALSE	canonical	3	1956	junction_5	159.683193299177	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669927	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.48	chr1	-	3909	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	126	17	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	589.452699719919	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTGCCACAGCTT	NA	False	NA	-33	True	AATAAA	-18	NA	181669765	181642882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669291
ES.2089.49	chr1	-	4019	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-7	13	intron_retention	FALSE	canonical	1	1	junction_3	651.786419918429	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCATTTCTTTGCCACA	NA	False	NA	-37	True	AATAAA	-14	NA	181669951	181642886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181647428_181647555_181648238_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.5	chr1	-	3697	15	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-36	48	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	754.011858429999	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAAGATGGCCAACTCT	NA	False	NA	-2	True	NA	NA	NA	181669980	181642851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181669852
ES.2089.50	chr1	-	3370	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	9	13	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	621.575819993024	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCATTTCTTTGCCACA	NA	False	NA	-37	True	AATAAA	-14	NA	181669917	181642886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.51	chr1	-	3802	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2251	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	768.110632576812	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCATTTCTTTGCCAC	NA	False	NA	-38	True	AATAAA	-45	NA	181672862	181642887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672045_181672362_181672806
ES.2089.52	chr1	-	3228	6	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-1121	12	intron_retention	FALSE	canonical	2	2	junction_2	869.431630434504	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCATTTCTTTGCCAC	NA	False	NA	-38	True	AATAAA	-45	NA	181649228	181642887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644970_181645053_181645135_181646404_181646574_181647428_181648343_181649000
ES.2089.54	chr1	-	3465	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	9	11	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_5	595.485690088848	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCATTTCTTTGCCA	NA	False	NA	-39	True	AATAAA	-44	NA	181669917	181642888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648267_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.55	chr1	-	3996	16	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	33	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	865.806588614853	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTCATTTCTTTGCC	NA	False	NA	-40	True	AATAAA	-43	NA	181669858	181642889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181668064_181668176_181669504
ES.2089.56	chr1	-	3265	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	2552	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	758.031728914309	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTCATTTCTTTGCC	NA	False	NA	-40	True	AATAAA	-43	NA	181667339	181642889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643657_181643894_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264
ES.2089.58	chr1	-	3784	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	135	10	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	581.93272146159	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTCATTTCTTTGCC	NA	False	NA	-40	True	AATAAA	-43	NA	181669756	181642889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669400
ES.2089.59	chr1	-	3467	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	604.540913401509	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAGCCTCATTTCTTTGC	NA	False	NA	-41	True	AATAAA	-42	NA	181669894	181642890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653235_181656271_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.6	chr1	-	3313	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-36	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669980	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643271_181643523_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.60	chr1	-	3601	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-1912	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	766.561152159435	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181672523	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672250_181672381_181672470
ES.2089.61	chr1	-	3389	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	628.485547433935	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669904	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.62	chr1	-	3678	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_13	585.04378028663	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669764	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669504
ES.2089.63	chr1	-	3606	14	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	592.565977651284	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181670561	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181670373
ES.2089.64	chr1	-	3204	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	599.791196409168	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669882	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656334_181659210_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.65	chr1	-	3578	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	782.189509371884	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669907	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181655538_181655644_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.66	chr1	-	6809	3	ISM	ENSMUSG00000004880.12	ENSMUST00000192075.2	2715	5	-1948	-21	-1948	0	intron_retention	FALSE	canonical	3	1997	junction_2	135.5	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181650055	181642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181644584_181644829_181644953_181645053
ES.2089.67	chr1	-	3419	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	582.763595434088	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCTGTTAGAGCC	NA	False	NA	47	True	AATAAA	-30	NA	181669904	181642902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663730_181663777_181663854_181665942_181666122_181669852
ES.2089.68	chr1	-	3443	14	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	2	47	junction_7	582.849874608686	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCTGTTAGAGCC	NA	False	NA	47	True	AATAAA	-30	NA	181669910	181642902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649163_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.69	chr1	-	3301	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCTGTTAGAGCC	NA	False	NA	47	True	AATAAA	-30	NA	181669917	181642902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643270_181643448_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.7	chr1	-	3202	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	13	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669913	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643128_181643424_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.70	chr1	-	5377	6	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-3307	-8	intron_retention	FALSE	canonical	3	1956	junction_5	129.629317671582	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181651414	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181648343_181649000
ES.2089.71	chr1	-	3444	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181669943	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643519_181643575_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.73	chr1	-	6310	11	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	1	-8	intron_retention	FALSE	canonical	3	1956	junction_3	160.063237503182	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181669943	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.77	chr1	-	3991	12	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	3	-8	intron_retention	FALSE	canonical	0	0	junction_5	646.605324971108	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181669941	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181648343_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.79	chr1	-	3574	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	378	-8	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_13	588.674521537744	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181669513	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669349
ES.2089.8	chr1	-	3537	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2294	20	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_13	584.006656766795	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181672905	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672806
ES.2089.80	chr1	-	4115	17	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2375	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	937.536299297259	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAGTTGCTGTTA	NA	False	NA	42	True	AATAAA	-25	NA	181672986	181642907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181668064_181668176_181672050_181672362_181672806
ES.2089.84	chr1	-	3474	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	595.008229270326	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAAGAGTTGCTGTT	NA	False	NA	41	True	AATAAA	-24	NA	181669937	181642908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653206_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.85	chr1	-	4183	13	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2286	-10	intron_retention	FALSE	canonical	3	33	junction_12	607.801702631888	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGAGTTGCTGT	NA	False	NA	40	True	AATAAA	-23	NA	181672897	181642909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672806
ES.2089.87	chr1	-	3275	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-16	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.907705896602	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAAATAAAGAGTTGCT	NA	False	NA	38	True	AATAAA	-21	NA	181669907	181642911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644496_181644927_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.9	chr1	-	3627	15	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-4	20	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	766.215361104068	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCCACAGCTTTGG	NA	False	NA	-30	True	AATAAA	-21	NA	181669930	181642879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181668064_181668176_181669852
ES.2089.90	chr1	-	3459	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	10	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	592.565977651284	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAAAATAAAGAGTTGCT	NA	False	NA	38	True	AATAAA	-21	NA	181669916	181642911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666111_181669852
ES.2089.91	chr1	-	3312	13	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-35	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	832.562543529847	2090	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTGAAAATAAAGAGTTG	NA	False	NA	36	True	AATAAA	-19	NA	181669979	181642913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653243_181659106_181659300_181659713_181659798_181663645_181663854_181665942_181666122_181669852
ES.2089.92	chr1	-	2964	13	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	6215	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	613.521438546002	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTTGAAAATAAAGAG	NA	False	NA	33	True	AATAAA	-16	NA	181663676	181642916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643425_181643505_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622
ES.2089.93	chr1	-	3568	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2251	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	766.042536917727	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTTGAAAATAAAGAG	NA	False	NA	33	True	AATAAA	-16	NA	181672862	181642916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672250_181672362_181672806
ES.2089.94	chr1	-	3847	4	NIC	ENSMUSG00000004880.12	novel	2715	5	NA	NA	141	3	intron_retention	FALSE	canonical	3	1997	junction_2	125.907373361002	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAGTTGAAAATAAAGA	NA	False	NA	32	True	AATAAA	-15	NA	181647966	181642917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181646574_181647428
ES.2089.97	chr1	-	3387	15	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	582.763595434088	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAGTTGAAAATAA	NA	False	NA	29	True	AATAAA	-12	NA	181669935	181642920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181643773_181643865_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ES.2089.98	chr1	-	3574	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	-2036	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	592.565977651284	2091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAGTTGAAAATAA	NA	False	NA	29	True	AATAAA	-12	NA	181672647	181642920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181672470
ES.2089.99	chr1	-	6010	14	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	14	0	intron_retention	FALSE	canonical	3	63	junction_13	576.231575325725	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAGTTGAAAATAA	NA	False	NA	29	True	AATAAA	-12	NA	181669877	181642920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264
ES.20890.1	chr2	+	1209	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-14030	-1268	multi-exon	FALSE	canonical	3	17	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGATTGTGATAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	168847914	168862018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168848074_168860968
ES.20890.10	chr2	+	529	3	Intergenic	novelGene_17289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	5.5	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCGTGAGAGTCAGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	168847942	168878552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168864580_168864668_168878241
ES.20890.11	chr2	+	2390	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-13995	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCCATTTCTGGTGTC	NA	False	NA	12	True	AATAAA	-24	NA	168847949	168863296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168848074_168861030
ES.20890.12	chr2	+	1215	3	Intergenic	novelGene_17290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAATTTGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	168847974	168866320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168864580_168864668_168865291
ES.20890.2	chr2	+	2494	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-14029	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGGTGTCTTTATTCA	NA	False	NA	20	True	AATAAA	-32	NA	168847915	168863304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168848074_168860968
ES.20890.3	chr2	+	1886	2	Intergenic	novelGene_17284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATGGTGATTAT	NA	False	NA	NA	False	NA	NA	NA	168847933	168866326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168864580
ES.20890.4	chr2	+	2247	2	Intergenic	novelGene_17285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATAAAACTCGTGGT	NA	False	NA	NA	False	AATAAA	-10	NA	168847935	168850688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168848579
ES.20890.5	chr2	+	2255	2	Intergenic	novelGene_17286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATAAAACTCGTGGT	NA	False	NA	NA	False	AATAAA	-10	NA	168847935	168850688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168848571
ES.20890.6	chr2	+	2368	1	Intergenic	novelGene_17287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGACCGGTGCTGCT	NA	False	NA	NA	False	AAAAAG	-45	NA	168847936	168850304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168847900_168850300
ES.20890.7	chr2	+	431	2	Intergenic	novelGene_17288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGAGTGCTGTCCCGT	NA	False	NA	NA	False	AATAAA	-14	NA	168847941	168878540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_168848074_168878241
ES.20890.8	chr2	+	2593	3	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-14003	-1	multi-exon	FALSE	canonical	2	3	junction_2	1	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGGTGTCTTTATTCA	NA	False	NA	20	True	AATAAA	-32	NA	168847941	168863304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168848074_168859866_168859992_168860968
ES.20890.9	chr2	+	3558	2	Genic_Genomic	ENSMUSG00000052368.3	novel	1361	1	NA	NA	-14003	6	multi-exon	FALSE	canonical	3	5	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTTCTCCATTTCTGG	NA	False	NA	8	True	AATAAA	-20	NA	168847941	168863292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_168848074_168859866
ES.20891.1	chr2	-	206	1	Intergenic	novelGene_17291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGTCAGAATGTAAAT	9626	False	NA	NA	False	AATAAA	-15	NA	168945935	168945729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_168945700_168945900
ES.20892.1	chr2	-	1524	4	Antisense	novelGene_ENSMUSG00000047907.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGGCTTTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	169623642	169616930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_169617666_169618111_169618206_169620423_169620671_169623194
ES.20892.2	chr2	-	1255	3	Antisense	novelGene_ENSMUSG00000047907.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTGGCTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	169620527	169616932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_169617666_169617787_169618206_169620423
ES.20893.1	chr2	+	178	1	Intergenic	novelGene_17292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGGAGGAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	169817514	169817692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_169817500_169817700
ES.20894.1	chr2	+	176	1	Intergenic	novelGene_17293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTCAATACTGGG	8704	False	NA	NA	False	NA	NA	NA	169923827	169924003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_169923800_169924000
ES.20895.1	chr2	+	176	1	Intergenic	novelGene_17294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATTTCAATACT	8901	False	NA	NA	False	NA	NA	NA	169924024	169924200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_169924000_169924200
ES.20896.1	chr2	-	156	1	Intergenic	novelGene_17295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	169944401	169944245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_169944200_169944400
ES.20897.1	chr2	-	5728	6	FSM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	-43	0	-43	0	multi-exon	FALSE	canonical	3	10	junction_5	10.6695829346793	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCGTGGTTTTCATT	NA	False	NA	0	True	AATATA	-20	NA	169973183	169950562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972967
ES.20897.10	chr2	-	3719	6	NIC	ENSMUSG00000052056.15	novel	5670	7	NA	NA	5	-1811	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.9565881421081	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGGGACTGAAATCTA	NA	False	NA	NA	False	AATAAA	-27	NA	169984593	169952376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_169952576_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169984533
ES.20897.11	chr2	-	1462	1	Intergenic	novelGene_17296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGTGGACCCTGAAA	5672	False	NA	NA	False	NA	NA	NA	169964908	169963446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_169963400_169964900
ES.20897.2	chr2	-	5667	7	FSM	ENSMUSG00000052056.15	ENSMUST00000109155.8	5670	7	5	-2	5	-1	multi-exon	FALSE	canonical	1	2	junction_6	14.599276998841	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTGGTTTTCAT	NA	False	NA	-1	True	AATATA	-19	NA	169984593	169950563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169984533
ES.20897.3	chr2	-	5868	6	NNC	ENSMUSG00000052056.15	novel	5685	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	12.9460418661458	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCGTGGTTTTCA	NA	False	NA	-2	True	AATATA	-18	NA	169973138	169950564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972780
ES.20897.4	chr2	-	5722	8	NNC	ENSMUSG00000052056.15	novel	5670	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	15.0983172464175	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTGTCGTGGTTTTC	NA	False	NA	-3	True	AATATA	-17	NA	169984593	169950565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169983073_169983131_169984533
ES.20897.5	chr2	-	4568	4	NIC	ENSMUSG00000052056.15	novel	5670	7	NA	NA	11291	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.2497987105808	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTGTCGTGGTTTTC	8731	False	NA	-3	True	AATATA	-17	NA	169961849	169950565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_169952576_169954399_169954535_169955980_169957493_169960938
ES.20897.6	chr2	-	3997	4	NNC	ENSMUSG00000052056.15	novel	5685	6	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.7196014438797	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGGTGTCGTGGTTTT	NA	False	NA	-4	True	AATATA	-16	NA	169973090	169950566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_169952576_169954399_169954530_169960938_169962674_169972967
ES.20897.7	chr2	-	5591	7	NNC	ENSMUSG00000052056.15	novel	5670	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4114951790825	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGGTGTCGTGGTTTT	NA	False	NA	-4	True	AATATA	-16	NA	169984598	169950566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_169952576_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169983073_169983131_169984533
ES.20897.8	chr2	-	3877	5	ISM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	11712	390	11712	-387	3prime_fragment	FALSE	canonical	3	18	junction_4	7.63216876123687	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCAAATCTATTAGAAAA	9152	False	NA	NA	False	TTTAAA	-16	NA	169961428	169950952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938
ES.20897.9	chr2	-	3867	7	FSM	ENSMUSG00000052056.15	ENSMUST00000109155.8	5670	7	5	1798	5	-1798	multi-exon	FALSE	canonical	1	2	junction_6	14.599276998841	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTATTTTGTCCCTAAA	NA	False	NA	NA	False	AATAAA	-40	NA	169984593	169952363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169984533
ES.20898.1	chr2	+	169	1	Intergenic	novelGene_17297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAACTGGGAATGATAT	NA	False	NA	NA	False	AAAACA	-29	NA	169985681	169985850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_169985700_169985800
ES.20899.1	chr2	-	177	1	Intergenic	novelGene_17298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	170005372	170005195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170005200_170005400
ES.209.1	chr1	+	159	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	30479054	30479213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_30479100_30479200
ES.2090.1	chr1	+	186	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTCCCAAGGTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	181717015	181717201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181717000_181717200
ES.20900.1	chr2	-	723	2	Intergenic	novelGene_17299	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGAGGGGAGCTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	170020137	170019211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170019838_170020040
ES.20901.1	chr2	-	168	1	Intergenic	novelGene_17300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAACCAATATAGC	NA	False	NA	NA	False	NA	NA	NA	170024367	170024199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170024200_170024400
ES.20902.1	chr2	+	175	1	Intergenic	novelGene_17301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGCGAGTGGGGTC	NA	False	NA	NA	False	NA	NA	NA	170029932	170030107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170029900_170030100
ES.20903.1	chr2	+	177	1	Intergenic	novelGene_17302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	170033516	170033693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170033500_170033700
ES.20904.1	chr2	-	216	1	Intergenic	novelGene_17303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCCTTCCACTGTAATG	NA	False	NA	NA	False	NA	NA	NA	170041614	170041398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170041400_170041600
ES.20905.1	chr2	+	178	1	Intergenic	novelGene_17304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	170044847	170045025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170044800_170045000
ES.20906.1	chr2	-	178	1	Intergenic	novelGene_17305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	170055848	170055670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170055700_170055800
ES.20907.1	chr2	+	207	1	Intergenic	novelGene_17306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTTCTGGTCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	170066790	170066997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170066800_170067000
ES.20908.1	chr2	+	194	1	Intergenic	novelGene_17307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	170079712	170079906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170079700_170079900
ES.20909.1	chr2	-	211	1	Intergenic	novelGene_17308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	170092413	170092202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170092200_170092400
ES.2091.1	chr1	+	3568	1	Antisense	novelGene_ENSMUSG00000022995.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGAACTTATAAAACA	NA	False	NA	NA	False	AATACA	-31	NA	181725510	181729078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181725500_181729100
ES.20910.1	chr2	+	308	1	FSM	ENSMUSG00000084013.2	ENSMUST00000118388.2	846	1	706	-168	706	168	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	170127660	170127968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_170127700_170128000
ES.20911.1	chr2	+	158	2	Intergenic	novelGene_17309	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAATAAATAAATCTTAA	2108	False	NA	NA	False	NA	NA	NA	170135777	170205148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170135848_170205060
ES.20912.1	chr2	-	220	1	Intergenic	novelGene_17310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCAGTTCTCTGATCTA	7820	False	NA	NA	False	AAAAAG	-22	NA	170143873	170143653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170143700_170143900
ES.20913.1	chr2	-	1370	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	-57	-942	-57	1	multi-exon	FALSE	canonical	3	30	junction_2	23.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGGTGGTTTTTTT	4089	False	NA	-2	True	AATAAA	-19	NA	170191772	170189066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_170190069_170191101_170191384_170191686
ES.20913.3	chr2	-	1417	3	FSM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-41	-782	14	-1	multi-exon	FALSE	canonical	3	10	junction_2	33.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTTGAGGTGGTTTTT	4160	False	NA	-4	True	AATAAA	-17	NA	170191701	170189068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_170190069_170191101_170191384_170191566
ES.20913.4	chr2	-	1521	4	FSM	ENSMUSG00000013523.14	ENSMUST00000133673.8	688	4	-37	-796	-37	-1	multi-exon	FALSE	canonical	3	7	junction_2	32.9983164553722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTTGAGGTGGTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	170199070	170189068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_170190069_170191101_170191384_170198167_170198234_170198897
ES.20914.1	chr2	-	138	1	Intergenic	novelGene_17311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCACCTG	NA	False	NA	-13	True	AATAAA	-11	NA	170304815	170304677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170304700_170304800
ES.20915.1	chr2	-	2117	5	ISM	ENSMUSG00000038567.6	ENSMUST00000038824.6	3560	12	8938	249	8938	-249	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTCAGATCTCATTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	170330127	170324876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_170326263_170327587_170327708_170327806_170328005_170328690_170328770_170329793
ES.20916.1	chr2	+	701	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	188	46	-22	10	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTATTTTAGAGTTC	4030	False	NA	22	True	ATTAAA	-25	NA	170353342	170360997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ES.20916.2	chr2	+	5652	2	NIC	ENSMUSG00000052033.14	novel	816	4	NA	NA	-11	0	intron_retention	FALSE	canonical	3	873	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	4041	False	NA	12	True	ATTAAA	-15	NA	170353353	170360987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_170358611_170360592
ES.20916.3	chr2	+	465	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	205	265	-5	-4	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATAATTTCCCTTCTC	4047	False	NA	6	True	AATAAA	-16	NA	170353359	170360778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ES.20916.4	chr2	+	745	5	NNC	ENSMUSG00000052033.14	novel	935	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	369.036160152362	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	4047	False	NA	12	True	ATTAAA	-15	NA	170353359	170360987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_170353390_170357658_170357767_170358469_170358611_170360360_170360432_170360592
ES.20916.5	chr2	+	732	4	FSM	ENSMUSG00000052033.14	ENSMUST00000109148.8	736	4	-59	63	16	-7	multi-exon	FALSE	canonical	3	14	junction_1	387.259029017472	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTCTGTCTCTATA	4068	False	NA	5	True	ATTAAA	-8	NA	170353380	170360980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_170353476_170357658_170357767_170358469_170358611_170360592
ES.20916.6	chr2	+	1371	3	ISM	ENSMUSG00000052033.14	ENSMUST00000109147.3	445	5	2454	-349	122	0	3prime_fragment	FALSE	canonical	3	792	junction_1	40.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	7619	False	NA	12	True	ATTAAA	-15	NA	170356931	170360987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_170357767_170358469_170358611_170360592
ES.20917.1	chr2	-	518	2	NNC	ENSMUSG00000043583.2	novel	1395	2	NA	NA	714	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACTGACCCATCTGC	NA	False	NA	NA	False	NA	NA	NA	170443223	170421362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_170421614_170442956
ES.20918.1	chr2	-	533	2	Intergenic	novelGene_17312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTTTACTTCGATT	4569	False	NA	NA	False	AATACA	-18	NA	170466146	170460738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170461154_170466028
ES.20918.2	chr2	-	4019	1	Intergenic	novelGene_17313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAGAGAGTCAGTAATT	2411	False	NA	NA	False	AATAAA	-14	NA	170468304	170464285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170464300_170468300
ES.20918.3	chr2	-	3374	3	Intergenic	novelGene_17314	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTTTTTTTTAATAA	701	False	NA	NA	False	NA	NA	NA	170470014	170465995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170468511_170468558_170468709_170469305
ES.20919.1	chr2	+	4801	3	Antisense	novelGene_ENSMUSG00000085158.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTCTCCACTTGCTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	170488422	170494835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_170488664_170489656_170493995_170494613
ES.2092.1	chr1	+	211	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTTGTGTAGTTAGGAA	NA	False	NA	NA	False	AATACA	-21	NA	181745452	181745663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181745500_181745700
ES.20920.1	chr2	-	679	2	Intergenic	novelGene_17315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGCCTTGGTCATGG	NA	False	NA	-4	True	NA	NA	NA	170515758	170512875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170513139_170515342
ES.20921.1	chr2	+	588	2	NNC	ENSMUSG00000027560.5	novel	1768	8	NA	NA	81	-141650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAACATCTGCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	170573807	170580039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_170574109_170579752
ES.20922.1	chr2	-	8765	1	Intergenic	novelGene_17316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	170622630	170613865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_170613900_170622600
ES.20923.1	chr2	+	3288	4	ISM	ENSMUSG00000027560.5	ENSMUST00000029075.5	1768	8	98828	2	98828	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	13.1993265821489	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCGTTAGTTCTTTCTGC	NA	False	NA	12	True	AATAAA	-13	NA	170672554	170721687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_170674992_170683339_170683476_170712730_170712852_170721093
ES.20924.1	chr2	+	181	1	Intergenic	novelGene_17317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	170836273	170836454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_170836300_170836500
ES.20925.1	chr2	+	1679	1	Intergenic	novelGene_17318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTCTACTGAACACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	171104554	171106233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_171104600_171106200
ES.20926.1	chr2	-	172	1	Intergenic	novelGene_17319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGCGAACATGTAATA	NA	False	NA	NA	False	NA	NA	NA	171140033	171139861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_171139900_171140000
ES.20927.1	chr2	+	693	2	Intergenic	novelGene_17320	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGATTTGCACCAGT	NA	False	NA	NA	False	AATAAA	-12	NA	171401313	171402097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_171401455_171401545
ES.20927.2	chr2	+	417	2	Intergenic	novelGene_17321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAATTCCTTTCATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	171401330	171408868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_171401455_171408575
ES.20928.1	chr2	-	132	1	Intergenic	novelGene_17322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171671779	171671647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_171671600_171671800
ES.20929.1	chr2	-	142	1	Intergenic	novelGene_17323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAGAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	171725022	171724880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_171724900_171725000
ES.2093.1	chr1	+	3041	1	Antisense	novelGene_ENSMUSG00000022995.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATACATCCTTGCTC	NA	False	NA	NA	False	CATAAA	-42	NA	181767912	181770953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181767900_181771000
ES.20930.1	chr2	-	3523	4	Intergenic	novelGene_17324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATCTTGGTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	172124602	172104525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172105395_172106428_172108697_172117697_172117882_172124400
ES.20931.1	chr2	+	89	1	Intergenic	novelGene_17325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCGTCTCGGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	172134230	172134319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172134200_172134300
ES.20932.1	chr2	-	576	4	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	4.24264068711928	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGTATTTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	172136517	172127336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_172127474_172134257_172134405_172135339_172135530_172136415
ES.20932.2	chr2	-	4474	1	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGATGTGTAGTCAGT	NA	False	NA	NA	False	NA	NA	NA	172136479	172132005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_172132000_172136500
ES.20932.3	chr2	-	726	4	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATAGATGTGTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	172136533	172132006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_172132278_172134257_172134405_172135339_172135530_172136415
ES.20932.4	chr2	-	2495	2	Antisense	novelGene_ENSMUSG00000085949.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATAGATGTGTAGTCAG	NA	False	NA	NA	False	NA	NA	NA	172136481	172132006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_172132278_172134257
ES.20932.5	chr2	-	175	2	Intergenic	novelGene_17326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGCTTCTTTTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	172136514	172135453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172135530_172136415
ES.20933.1	chr2	-	217	1	Intergenic	novelGene_17327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTCGGGAGG	NA	False	NA	NA	False	NA	NA	NA	172162216	172161999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172162000_172162200
ES.20934.1	chr2	+	3608	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	9	0	9	0	multi-exon	FALSE	canonical	3	138	junction_1	7.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTCTGCCGTCTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	172187493	172197669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172187768_172193374_172193545_172194505
ES.20934.2	chr2	+	4110	1	NIC	ENSMUSG00000027495.5	novel	3617	3	NA	NA	16	-6059	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGGTCAGAAGCATTC	NA	False	NA	NA	False	NA	NA	NA	172187500	172191610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172187500_172191600
ES.20934.3	chr2	+	795	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	20	2802	20	-2802	multi-exon	FALSE	canonical	3	138	junction_1	7.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTTTTAATGCTGT	NA	False	NA	NA	False	NA	NA	NA	172187504	172194867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172187768_172193374_172193545_172194505
ES.20934.4	chr2	+	1742	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	21	1854	21	-1854	multi-exon	FALSE	canonical	3	138	junction_1	7.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTAGGGTCCTATTGCT	NA	False	NA	NA	False	AATACA	-21	NA	172187505	172195815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172187768_172193374_172193545_172194505
ES.20934.5	chr2	+	1710	3	NNC	ENSMUSG00000027495.5	novel	3617	3	NA	NA	22	-1861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTCTTAATTAGGGTCC	NA	False	NA	NA	False	AATACA	-14	NA	172187506	172195808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172187744_172193374_172193545_172194505
ES.20934.6	chr2	+	1821	4	NNC	ENSMUSG00000027495.5	novel	3617	3	NA	NA	45	-1871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.1248916810278	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAAGAGATGTCTTA	NA	False	NA	NA	False	AATACA	-4	NA	172187529	172195798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172187768_172191520_172191641_172193374_172193545_172194505
ES.20935.1	chr2	+	4351	5	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-29	-1364	intron_retention	FALSE	canonical	3	132	junction_1	114.73120761153	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTCCTCCTTCTTCAC	NA	False	NA	18	True	AATAAA	-18	NA	172212571	172223004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535
ES.20935.11	chr2	+	1901	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	24	-1365	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	151.072168184613	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	17	True	AATAAA	-17	NA	172212624	172223003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212734_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.12	chr2	+	3433	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	18	0	18	0	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTAAAGGTAGTTT	NA	False	NA	13	True	AATAAA	-20	NA	172212671	172224368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.13	chr2	+	1893	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	195	1363	195	-1363	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTCCTCCTTCTTCACG	NA	False	NA	19	True	AATAAA	-19	NA	172212848	172223005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.14	chr2	+	4243	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	199	1362	199	-1362	intron_retention	FALSE	canonical	3	206	junction_1	83.4056353012193	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCTCCTTCTTCACGT	NA	False	NA	20	True	AATAAA	-20	NA	172212852	172223006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535
ES.20935.15	chr2	+	3280	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	214	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	150.732080195292	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTAAAGGTAGTTT	NA	False	NA	13	True	AATAAA	-20	NA	172212867	172224368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219492_172219927_172222279
ES.20935.16	chr2	+	3884	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	221	-1363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.225188821639	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTCCTCCTTCTTCACG	NA	False	NA	19	True	AATAAA	-19	NA	172212874	172223005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172220262
ES.20935.18	chr2	+	5570	5	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	232	2	232	-2	intron_retention	FALSE	canonical	3	206	junction_1	83.4056353012193	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGTGACGTAAAGGTAGT	NA	False	NA	11	True	AATAAA	-18	NA	172212885	172224366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535
ES.20935.19	chr2	+	4327	4	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	244	-1369	intron_retention	FALSE	canonical	3	206	junction_1	95.4719272293635	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCACTGTTCCTCCTTC	NA	False	NA	13	True	AATAAA	-13	NA	172212897	172222999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212948_172214848_172215050_172217557_172218170_172219535
ES.20935.2	chr2	+	3361	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGACGTAAAGGTAGTTTG	NA	False	NA	14	True	AATAAA	-21	NA	172212573	172224369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.20	chr2	+	1971	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	288	-1369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.218805597761	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCACTGTTCCTCCTTC	NA	False	NA	13	True	AATAAA	-13	NA	172212941	172222999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172213125_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.21	chr2	+	3945	3	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	4901	1367	4901	-1367	intron_retention	FALSE	canonical	3	365	junction_1	12.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172217554	172223001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172217836_172217971_172218170_172219535
ES.20935.3	chr2	+	1979	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-9	-1363	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTCCTCCTTCTTCACG	NA	False	NA	19	True	AATAAA	-19	NA	172212591	172223005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.4	chr2	+	5691	5	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	-4	1	intron_retention	FALSE	canonical	3	132	junction_1	114.73120761153	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGACGTAAAGGTAGTTTG	NA	False	NA	14	True	AATAAA	-21	NA	172212596	172224369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535
ES.20935.6	chr2	+	4453	4	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	2	-1367	intron_retention	FALSE	canonical	3	132	junction_1	130.099961568019	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTTCCTCCTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	172212602	172223001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172212777_172214848_172215050_172217557_172218170_172219535
ES.20935.7	chr2	+	3282	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	151.072168184613	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACGTGACGTAAAGGTA	NA	False	NA	9	True	AATAAA	-16	NA	172212604	172224364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212734_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20935.8	chr2	+	1952	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	16	-1363	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	166.407932503231	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTCCTCCTTCTTCACG	NA	False	NA	19	True	AATAAA	-19	NA	172212616	172223005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219931_172222285
ES.20935.9	chr2	+	1921	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	18	-1369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.218805597761	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCACTGTTCCTCCTTC	NA	False	NA	13	True	AATAAA	-13	NA	172212618	172222999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172212752_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ES.20936.1	chr2	-	1861	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	1	0	-1	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACGTGGGTAATCATTTG	NA	False	NA	-3	True	AATATA	-21	NA	172212455	172198110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.10	chr2	-	4668	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	418.508941810088	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212440	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172204495_172204536_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.12	chr2	-	4288	5	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	3389	-2	intron_retention	FALSE	canonical	3	1117	junction_3	120.11947177706	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172209037	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841
ES.20936.13	chr2	-	1855	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	432.295616447819	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212440	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199192_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.14	chr2	-	3169	9	NNC	ENSMUSG00000027496.16	novel	1905	9	NA	NA	-369	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	432.162856311136	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212824	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172211446
ES.20936.15	chr2	-	5408	7	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1025	junction_6	135.048653784067	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212454	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172198902_172199000_172199176_172201674_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.16	chr2	-	5553	5	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-2	intron_retention	FALSE	canonical	2	2	junction_4	556.873583050947	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212440	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172209092_172212392
ES.20936.17	chr2	-	1934	10	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	523.612687884452	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGGAGTACGTGGGT	NA	False	NA	-12	True	AATATA	-12	NA	172212440	172198119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205327_172205425_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.18	chr2	-	1950	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-4	intron_retention	FALSE	canonical	3	1025	junction_7	149.451377664156	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGGAGTACGTGGGT	NA	False	NA	-12	True	AATATA	-12	NA	172212454	172198119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.19	chr2	-	2019	9	NNC	ENSMUSG00000027496.16	novel	1905	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	433.437261175132	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGGAGTACGTGGGT	NA	False	NA	-12	True	AATATA	-12	NA	172212440	172198119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172211057_172212314
ES.20936.2	chr2	-	1793	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	441.199154438844	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212440	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172212392
ES.20936.20	chr2	-	5021	7	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1025	junction_6	153.988906526845	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTGGAGTACGTGGGT	NA	False	NA	-12	True	AATATA	-12	NA	172212441	172198119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172198902_172199000_172201824_172204694_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.21	chr2	-	1848	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	424.456693167866	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACCTGGAGTACGTGG	NA	False	NA	-14	True	AATATA	-10	NA	172212439	172198121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201660_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.22	chr2	-	1669	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	193	0	-187	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGGTCTTGTTTCCAG	NA	False	NA	0	True	AATAAA	-35	NA	172212455	172198302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.24	chr2	-	1658	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	1	-199	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	432.295616447819	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACACCCATTCAGGG	NA	False	NA	-12	True	AATAAA	-23	NA	172212440	172198314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199192_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.25	chr2	-	1721	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-15	199	0	-199	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACACCCATTCAGGG	NA	False	NA	-12	True	AATAAA	-23	NA	172212441	172198314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ES.20936.26	chr2	-	4129	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	-7	-204	intron_retention	FALSE	canonical	3	1025	junction_7	145.600095312819	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAAGTGACACCCATT	NA	False	NA	-17	True	AATAAA	-18	NA	172212433	172198319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172198902_172199000_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.27	chr2	-	1595	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	-3	-206	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	431.979961919532	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTAAGTGACACCCA	NA	False	NA	-19	True	AATAAA	-16	NA	172212444	172198321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205666_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.3	chr2	-	3280	8	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-14	1	1	-1	intron_retention	FALSE	canonical	3	1117	junction_5	124.097558725515	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212440	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905
ES.20936.4	chr2	-	1966	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	-62	1	-33	-1	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212488	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ES.20936.5	chr2	-	1898	9	NNC	ENSMUSG00000027496.16	novel	1905	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	433.437261175132	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212440	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212334
ES.20936.6	chr2	-	5109	7	ISM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	7	0	-1	intron_retention	FALSE	canonical	3	1117	junction_5	105.577380784585	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212455	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841
ES.20936.7	chr2	-	1751	8	NNC	ENSMUSG00000027496.16	novel	1905	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	576.503252375908	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212443	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212335
ES.20936.8	chr2	-	1800	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	431.979961919532	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	False	NA	-9	True	AATATA	-15	NA	172212444	172198116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205666_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ES.20936.9	chr2	-	7121	7	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	573.804094520847	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAGTACGTGGGTAA	NA	False	NA	-10	True	AATATA	-14	NA	172212441	172198117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172198902_172199000_172204496_172204537_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172212392
ES.20937.1	chr2	-	154	1	Intergenic	novelGene_17328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAGAAAGAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	172213723	172213569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172213600_172213700
ES.20938.1	chr2	+	179	1	Intergenic	novelGene_17329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGCTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	172230390	172230569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172230400_172230600
ES.20939.1	chr2	+	3689	7	NNC	ENSMUSG00000074570.15	novel	2702	7	NA	NA	7	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2.29128784747792	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCACTTTGAATGCATC	NA	False	NA	NA	False	AGTAAA	-16	NA	172235720	172275665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172235926_172258039_172258463_172265518_172265621_172266519_172266601_172268555_172269846_172271564_172271640_172274152
ES.20939.2	chr2	+	3666	7	FSM	ENSMUSG00000074570.15	ENSMUST00000109136.3	2702	7	-79	-885	0	-12	multi-exon	FALSE	canonical	0	0	junction_5	2.19215773966098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCACTTTGAATGCATC	NA	False	NA	NA	False	AGTAAA	-16	NA	172235740	172275665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172235926_172258039_172258463_172265518_172265621_172266519_172266595_172268555_172269846_172271561_172271640_172274152
ES.20939.3	chr2	+	2895	1	NIC	ENSMUSG00000074570.15	novel	2702	7	NA	NA	34876	-1189	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAACAACAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	172270696	172273591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172270700_172273600
ES.2094.1	chr1	+	7231	2	Antisense	novelGene_ENSMUSG00000103317.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTTTATCGCTGTGGC	NA	False	NA	NA	False	NA	NA	NA	181783940	181796353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181784135_181789316
ES.20940.1	chr2	-	191	1	Intergenic	novelGene_17330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAGCAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	172263310	172263119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172263100_172263300
ES.20941.1	chr2	-	5826	1	NIC	ENSMUSG00000087633.2	novel	2146	2	NA	NA	84	-8847	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	172282396	172276570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172276600_172282400
ES.20942.1	chr2	+	1138	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	-3	1038	-3	-1038	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCGTGGTCACTTGCT	NA	False	NA	9	True	TATAAA	-20	NA	172282472	172310790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ES.20942.2	chr2	+	2159	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	14	0	14	0	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	False	NA	16	True	AATAAA	-16	NA	172282489	172311828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ES.20942.3	chr2	+	5137	8	NIC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	16	-3	intron_retention	FALSE	canonical	3	407	junction_4	20.5038572777247	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGTTGGTTTTG	NA	False	NA	13	True	AATAAA	-13	NA	172282491	172311825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172308252_172308348_172308445_172310515
ES.20942.4	chr2	+	3281	10	NNC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	-11	1357	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	137.773924677305	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	172282510	172313185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515_172312564_172312777
ES.20942.5	chr2	+	2299	10	NNC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	182.221341461286	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGGGGGGGTTGGT	NA	False	NA	9	True	AATAAA	-9	NA	172282530	172311821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172307862_172308051_172308193_172308252_172308348_172308445_172310515
ES.20942.6	chr2	+	3467	1	Genic_Genomic	ENSMUSG00000027502.12	novel	NA	NA	NA	NA	-2729	-12940	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTGTTGAAAGAGACAC	4015	False	NA	NA	False	NA	NA	NA	172292167	172295634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_172292200_172295600
ES.20942.7	chr2	+	1308	1	NIC	ENSMUSG00000027502.12	novel	2173	9	NA	NA	15617	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGGGGGGGTTGGT	NA	False	NA	9	True	AATAAA	-9	NA	172310513	172311821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172310500_172311800
ES.20943.1	chr2	-	188	1	Intergenic	novelGene_17331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTAACTCGAGAGT	NA	False	NA	NA	False	NA	NA	NA	172317023	172316835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172316800_172317000
ES.20944.1	chr2	+	159	1	Intergenic	novelGene_17332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	172322848	172323007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172322800_172323000
ES.20945.1	chr2	-	338	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	-46	-121	-46	121	mono-exon	FALSE	NA	NA	NA	NA	NA	891	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAGACACCTAAGCAG	NA	False	NA	NA	False	NA	NA	NA	172351657	172351319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172351300_172351700
ES.20945.2	chr2	-	208	2	Genic_Genomic	ENSMUSG00000081344.6	novel	171	1	NA	NA	-31	89	multi-exon	FALSE	non_canonical	0	0	junction_1	0	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	172351642	172351351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_172351368_172351450
ES.20946.1	chr2	+	1655	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3914	-206	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAATCCGTTCCCTCTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	172387598	172399540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.10	chr2	+	3790	7	FSM	ENSMUSG00000028640.12	ENSMUST00000128406.8	2724	7	-1062	-4	-2	4	multi-exon	FALSE	canonical	0	0	junction_1	241.022589997056	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGAAAGTCTGGTTC	NA	False	NA	14	True	AATAAA	-16	NA	172391510	172400531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172392764_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.11	chr2	+	4738	6	NIC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	551	junction_1	50.5940707988594	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172391512	172400537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172398130_172399010
ES.20946.12	chr2	+	4174	7	FSM	ENSMUSG00000028640.12	ENSMUST00000099058.10	2985	7	-1189	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172391512	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.13	chr2	+	4217	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	233.000476871234	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGAAAGTCTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	172391512	172400530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172397148_172397661_172398130_172399010
ES.20946.15	chr2	+	2819	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	231.78006816808	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391512	172400542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398111_172399010
ES.20946.16	chr2	+	2723	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	233.000476871234	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGAAAGTCTGGTTC	NA	False	NA	14	True	AATAAA	-16	NA	172391513	172400531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172395977_172397984_172398130_172399010
ES.20946.17	chr2	+	2858	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	235.641971832034	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391513	172400542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393894_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.18	chr2	+	2589	8	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	223.249654340752	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGAAAGTCTGGTTC	NA	False	NA	14	True	AATAAA	-16	NA	172391514	172400531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010_172399224_172399459
ES.20946.2	chr2	+	2654	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3914	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172387598	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.20	chr2	+	3732	6	NIC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	5	-210	intron_retention	FALSE	canonical	3	551	junction_1	50.5940707988594	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAATCCGTTCCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	172391517	172399536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172398130_172399010
ES.20946.21	chr2	+	2743	7	NNC	ENSMUSG00000028640.12	novel	2724	7	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	239.553056057873	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172392464	172400542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172392660_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.22	chr2	+	1628	7	NNC	ENSMUSG00000028640.12	novel	2724	7	NA	NA	1	-210	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	239.553056057873	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAATCCGTTCCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	172392573	172399536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172392660_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.23	chr2	+	1722	7	FSM	ENSMUSG00000028640.12	ENSMUST00000128406.8	2724	7	15	987	15	-206	multi-exon	FALSE	canonical	0	0	junction_1	241.022589997056	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAATCCGTTCCCTCTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	172392587	172399540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172392764_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.24	chr2	+	2664	7	NNC	ENSMUSG00000028640.12	novel	2985	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	240.287790414374	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392589	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172392709_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.25	chr2	+	2836	7	FSM	ENSMUSG00000028640.12	ENSMUST00000122982.2	1959	7	-84	-793	27	0	multi-exon	FALSE	canonical	2	3	junction_1	239.920415045397	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392599	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172392891_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.26	chr2	+	2943	7	NNC	ENSMUSG00000028640.12	novel	2985	7	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	273.147345259335	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCTGGTTCTGACCCT	NA	False	NA	21	True	AATAAA	-23	NA	172392628	172400538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399124
ES.20946.27	chr2	+	3228	6	NNC	ENSMUSG00000028640.12	novel	2985	7	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_3	263.541571673237	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392641	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172393810_172393915_172393968_172395335_172395553_172395962_172396080_172397984_172398130_172399010
ES.20946.28	chr2	+	2626	7	NNC	ENSMUSG00000028640.12	novel	2985	7	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.022589997056	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTCTGAAAGTCTGGT	NA	False	NA	12	True	AATAAA	-14	NA	172392955	172400529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172393047_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.29	chr2	+	4782	4	NIC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	473	-7	intron_retention	FALSE	canonical	3	614	junction_1	28.9865869364129	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCGATAGAATCTCTGA	NA	False	NA	3	True	AATAAA	-5	NA	172393383	172400520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172393810_172393915_172393968_172395335_172398130_172399010
ES.20946.3	chr2	+	2604	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3340	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	240.287790414374	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAATCTCTGAAAGTCT	NA	False	NA	9	True	AATAAA	-11	NA	172388172	172400526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172388245_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.4	chr2	+	2797	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-857	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.022589997056	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTGGTTCTGACCC	NA	False	NA	20	True	AATAAA	-22	NA	172390655	172400537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172390910_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.5	chr2	+	3010	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	-172	0	-172	0	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391340	172400542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.6	chr2	+	2772	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	217.157904658236	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391464	172400542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399124
ES.20946.7	chr2	+	5642	5	ISM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	-25	7	-25	-4	intron_retention	FALSE	canonical	3	551	junction_1	39.6319000301525	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAAGTCTGGTTCTGAC	NA	False	NA	18	True	AATAAA	-20	NA	172391487	172400535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960
ES.20946.8	chr2	+	1854	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	-19	1003	-19	-207	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATCCGTTCCCTCTC	NA	False	NA	NA	False	ATTAAA	-22	NA	172391493	172399539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20946.9	chr2	+	4365	6	NIC	ENSMUSG00000028640.12	novel	2985	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	564	junction_3	44.2113107699828	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172391506	172400539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ES.20947.1	chr2	+	6735	2	Intergenic	novelGene_17333	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCGGGTGTGGTAGTAC	NA	False	NA	NA	False	NA	NA	NA	172428601	172435373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172433631_172433667
ES.20947.2	chr2	+	1948	1	Intergenic	novelGene_17334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCGGGTGTGGTAGTAC	NA	False	NA	NA	False	NA	NA	NA	172433425	172435373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172433400_172435400
ES.20948.1	chr2	+	3474	1	Intergenic	novelGene_17335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCTCTTCTAGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	172438420	172441894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172438400_172441900
ES.20949.1	chr2	-	2218	1	Intergenic	novelGene_17336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACACTCATGCATAAAATT	6978	False	NA	NA	False	NA	NA	NA	172456296	172454078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172454100_172456300
ES.20949.2	chr2	-	172	1	Intergenic	novelGene_17337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAAAGAAAGCCAAC	8124	False	NA	NA	False	NA	NA	NA	172455150	172454978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172455000_172455200
ES.2095.1	chr1	+	2815	1	Antisense	novelGene_ENSMUSG00000102950.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAAAACCCAAATAGAA	8750	False	NA	NA	False	NA	NA	NA	181812855	181815670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181812900_181815700
ES.20950.1	chr2	+	3277	1	Intergenic	novelGene_17338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAACGTAGGTCAGTGA	122	False	NA	NA	False	AATAAA	-24	NA	172472683	172475960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172472700_172476000
ES.20951.1	chr2	-	166	1	Intergenic	novelGene_17339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGGTACAAAC	NA	False	NA	NA	False	NA	NA	NA	172474393	172474227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172474200_172474400
ES.20952.1	chr2	-	172	1	Intergenic	novelGene_17340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172479765	172479593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172479600_172479800
ES.20953.1	chr2	+	332	1	Intergenic	novelGene_17341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCAAAAACACCATATGA	NA	False	NA	NA	False	NA	NA	NA	172493578	172493910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172493600_172493900
ES.20953.2	chr2	+	196	1	Intergenic	novelGene_17342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCAGAGGTCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	172493579	172493775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172493600_172493800
ES.20954.1	chr2	-	3479	3	Intergenic	novelGene_17343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTGCCCATCCCTGCG	NA	False	NA	NA	False	AATAAA	-20	NA	172699002	172690417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172693025_172696403_172696845_172698571
ES.20954.2	chr2	-	1719	4	Intergenic	novelGene_17344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGGTTTGCCCATCCC	NA	False	NA	NA	False	AATAAA	-16	NA	172698987	172690421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172691162_172692902_172693025_172696403_172696845_172698571
ES.20954.3	chr2	-	919	3	Intergenic	novelGene_17345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTACAATCCAGCAT	NA	False	NA	NA	False	ACTAAA	-9	NA	172698617	172692592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_172693025_172696403_172696845_172698571
ES.20955.1	chr2	+	5359	2	Antisense	novelGene_ENSMUSG00000008999.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTCTTTCTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	172709094	172715247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_172710723_172711516
ES.20956.1	chr2	+	515	2	Antisense	novelGene_ENSMUSG00000008999.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	172715949	172716522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_172716283_172716340
ES.20957.1	chr2	+	3649	1	Antisense	novelGene_ENSMUSG00000008999.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTATTTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	172757502	172761151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_172757500_172761200
ES.20958.11	chr2	-	4934	4	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	62159	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.1057644914582	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGACCCATGTGTGTAT	NA	False	NA	-8	True	AATAAA	-21	NA	172719726	172709813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710882_172711043_172712080_172714664_172714776_172717007
ES.20958.13	chr2	-	3814	9	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-221	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.7413277465133	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGACCCATGTGTGTAT	NA	False	NA	-8	True	AATAAA	-21	NA	172782335	172709813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710882_172711043_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172775101_172775196_172781447
ES.20958.14	chr2	-	2756	7	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	25999	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.441258814729	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCGACCCATGTGTGT	NA	False	NA	-10	True	AATAAA	-19	NA	172755886	172709815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710931_172711168_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172755691
ES.20958.15	chr2	-	3417	9	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-231	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.50863882789	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCGACCCATGTGTGT	NA	False	NA	-10	True	AATAAA	-19	NA	172782345	172709815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710886_172711044_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447_172781799_172782112
ES.20958.17	chr2	-	3418	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-15	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.2689736604955	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGTTGTCCGACCCAT	NA	False	NA	-16	True	AATAAA	-13	NA	172782129	172709821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710922_172711165_172712080_172714670_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.18	chr2	-	3111	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	110	-72	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.366304729277	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTATAAATAGAGTAAG	NA	False	NA	-71	True	AATAAA	-18	NA	172781775	172709876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710899_172711046_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.19	chr2	-	3359	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-5	-78	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.366304729277	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTCTGTATAAATAG	NA	False	NA	-77	True	AATAAA	-12	NA	172782119	172709882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710901_172711138_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.2	chr2	-	3841	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-335	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.366304729277	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTGTGTATTTGTGTC	NA	False	NA	-1	True	AATAAA	-28	NA	172782449	172709806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710882_172711043_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.20	chr2	-	2350	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-316	1636	-316	-1636	multi-exon	FALSE	canonical	3	82	junction_3	13.8734358477712	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGTTTCTTGGTTTAT	NA	False	NA	0	True	AATGAA	-41	NA	172782430	172711440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.21	chr2	-	1898	6	NIC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	17	-1678	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	37.349163310575	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTTAGGACGTTACA	NA	False	NA	-42	True	AATAAA	-12	NA	172782097	172711482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_172712080_172714664_172714776_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.22	chr2	-	1624	3	ISM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-147	24968	-147	23138	5prime_fragment	FALSE	canonical	3	82	junction_2	0.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCCATTGTTAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	172782261	172734772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_172735390_172758259_172758453_172781447
ES.20958.23	chr2	-	669	3	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	116	-16383	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTTTAATTAAAAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	172781769	172774293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172774547_172775101_172775196_172781447
ES.20958.24	chr2	-	1208	3	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-309	-16498	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATTAACATCTGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	172782423	172774408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172774547_172775101_172775196_172781447
ES.20958.25	chr2	-	2111	1	Genic_Genomic	ENSMUSG00000008999.8	novel	NA	NA	NA	NA	-262	-22355	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATAAAATAATGACT	NA	False	NA	NA	False	ATTAAA	-5	NA	172782376	172780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_172780300_172782400
ES.20958.3	chr2	-	3689	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-252	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.366304729277	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTGTGTATTTGTGT	NA	False	NA	-2	True	AATAAA	-27	NA	172782366	172709807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710909_172711138_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.4	chr2	-	2164	3	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	68915	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTGTGTATTTGTGT	NA	False	NA	-2	True	AATAAA	-27	NA	172712970	172709807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710933_172711168_172712080_172712842
ES.20958.5	chr2	-	3782	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-262	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.2106182218293	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTGTGTATTTGTGT	NA	False	NA	-2	True	AATAAA	-27	NA	172782376	172709807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710950_172711099_172712080_172714664_172714776_172717007_172717088_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20958.9	chr2	-	3680	8	NNC	ENSMUSG00000008999.8	novel	3670	7	NA	NA	-256	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.366304729277	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGACCCATGTGTGTATT	NA	False	NA	-7	True	AATAAA	-22	NA	172782370	172709812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172710931_172711168_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ES.20959.1	chr2	+	212	1	Intergenic	novelGene_17346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGGTTTATTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	172810187	172810399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172810200_172810400
ES.2096.1	chr1	+	177	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTGGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	181827636	181827813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181827600_181827800
ES.20960.1	chr2	+	3566	8	FSM	ENSMUSG00000005883.16	ENSMUST00000144044.8	3619	8	47	6	47	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCACACTGGTGAGTGTC	NA	False	NA	NA	False	AGTAAA	-17	NA	172819539	172835358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172819987_172825808_172825898_172826664_172827784_172828584_172828622_172828920_172829031_172830723_172831794_172833838_172833951_172834776
ES.20960.2	chr2	+	5377	8	NIC	ENSMUSG00000005883.16	novel	1709	13	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_1	0.349927106111883	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCACACTGGTGAGT	NA	False	NA	NA	False	AGTAAA	-14	NA	172821624	172835355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172823886_172825808_172825898_172826664_172827784_172828584_172828622_172828920_172829031_172830723_172831794_172833838_172833951_172834776
ES.20961.1	chr2	+	1756	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	-10	-4	-10	4	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCAAGTTTCTCATCA	NA	False	NA	89	True	NA	NA	NA	172841899	172857536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.10	chr2	+	1528	12	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	16	-65	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	326.651961776187	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGCCTGCCCCTTCAT	NA	False	NA	20	True	AATAAA	-9	NA	172841932	172857467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.11	chr2	+	3288	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	16	-59	intron_retention	FALSE	canonical	3	1013	junction_9	110.218011232285	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841932	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.12	chr2	+	1056	6	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	16	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	484.457056920425	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841932	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172851228_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.13	chr2	+	4327	2	NNC	ENSMUSG00000027509.12	novel	742	8	NA	NA	16	-3553	intron_retention	FALSE	non_canonical	0	0	junction_1	0	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAAAAGGGTTATG	NA	False	NA	NA	False	NA	NA	NA	172841932	172847684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172843754_172845178
ES.20961.14	chr2	+	3470	2	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	23	9848	16	-3553	intron_retention	FALSE	canonical	3	1282	junction_1	0	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAAAAGGGTTATG	NA	False	NA	NA	False	NA	NA	NA	172841932	172847684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172842170_172844451
ES.20961.15	chr2	+	4128	10	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	17	-59	intron_retention	FALSE	canonical	3	57	junction_1	357.416484244749	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841933	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172854049_172854419_172854615_172857075
ES.20961.16	chr2	+	2102	4	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	30	-3553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	569.44788074844	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAAAAGGGTTATG	NA	False	NA	NA	False	NA	NA	NA	172841946	172847684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846005
ES.20961.17	chr2	+	2707	3	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	37	9844	30	-3549	intron_retention	FALSE	canonical	3	1117	junction_2	82.5	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAGGGTTATGAGTC	NA	False	NA	NA	False	NA	NA	NA	172841946	172847688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172842170_172844451_172844547_172845299
ES.20961.18	chr2	+	4896	11	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	30	-59	intron_retention	FALSE	canonical	0	0	junction_4	347.335572609544	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841946	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847565_172848403_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419
ES.20961.2	chr2	+	1756	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	0	-59	intron_retention	FALSE	canonical	3	1013	junction_9	103.672995519566	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841909	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172854049_172854419_172854615_172857075
ES.20961.20	chr2	+	4100	11	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	45	58	38	-58	intron_retention	FALSE	canonical	3	1013	junction_10	74.4510577493698	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841954	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419
ES.20961.22	chr2	+	4882	9	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	43	-59	intron_retention	FALSE	canonical	3	1013	junction_7	111.763072501609	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841959	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172854049_172854419_172854615_172857075
ES.20961.23	chr2	+	4152	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	44	-61	intron_retention	FALSE	canonical	3	1013	junction_9	110.604204260055	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCCCCTTCATCCCT	NA	False	NA	24	True	AATAAA	-13	NA	172841960	172857471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.25	chr2	+	3702	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	46	-61	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_8	345.398440420087	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCCCCTTCATCCCT	NA	False	NA	24	True	AATAAA	-13	NA	172841962	172857471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851544_172851991_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.26	chr2	+	2574	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	50	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.085913790018	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841966	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846005_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.27	chr2	+	4346	10	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	50	-59	intron_retention	FALSE	canonical	3	1013	junction_8	115.952097388917	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841966	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.28	chr2	+	1539	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	50	-59	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	362.484496220183	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841966	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.29	chr2	+	4308	10	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	50	-59	intron_retention	FALSE	canonical	3	1013	junction_8	113.962090296253	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841966	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172848761_172849852_172849940_172850036_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.3	chr2	+	1648	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	-2	-64	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	344.303609052551	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCCTGCCCCTTCATC	NA	False	NA	21	True	AATAAA	-10	NA	172841914	172857468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853817_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.30	chr2	+	1622	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	50	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	332.180623971581	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841966	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854619_172857084
ES.20961.31	chr2	+	1520	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	58	-62	combination_of_known_splicesites	FALSE	canonical	2	18	junction_1	352.878732711395	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTGCCCCTTCATCCC	NA	False	NA	23	True	AATAAA	-12	NA	172841974	172857470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.33	chr2	+	3762	11	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	60	-65	intron_retention	FALSE	non_canonical	0	0	junction_8	363.952318305571	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGCCTGCCCCTTCAT	NA	False	NA	20	True	AATAAA	-9	NA	172841976	172857467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851541_172851983_172854049_172854419_172854615_172857075
ES.20961.34	chr2	+	1857	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	65	-60	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	337.913994632651	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCCCTTCATCCCTT	NA	False	NA	25	True	AATAAA	-14	NA	172841981	172857472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842417_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.35	chr2	+	1523	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	67	-58	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	363.827761447639	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841983	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.36	chr2	+	1315	9	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	68	-59	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	397.688241591325	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841984	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.37	chr2	+	1700	13	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	70	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	423.568143540354	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841986	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172855711_172855806_172857075
ES.20961.38	chr2	+	1525	11	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	72	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	363.952318305571	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCCCTTCATCCCTT	NA	False	NA	25	True	AATAAA	-14	NA	172841988	172857472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851300_172853972_172854049_172854419_172854615_172857075
ES.20961.39	chr2	+	2230	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	77	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	349.176954357737	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGCCTGCCCCTTCAT	NA	False	NA	20	True	AATAAA	-9	NA	172841993	172857467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847404_172848394_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.4	chr2	+	4272	10	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	-2	-60	intron_retention	FALSE	canonical	3	1013	junction_8	108.952362452361	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCCCTTCATCCCTT	NA	False	NA	25	True	AATAAA	-14	NA	172841914	172857472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172854049_172854419_172854615_172857075
ES.20961.40	chr2	+	2788	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	77	-61	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_11	328.250005507544	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCCCCTTCATCCCT	NA	False	NA	24	True	AATAAA	-13	NA	172841993	172857471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172855806_172857075
ES.20961.41	chr2	+	2832	12	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	78	-59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	331.899790711564	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841994	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172855841
ES.20961.42	chr2	+	5655	1	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	79	-3587	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	172841995	172847650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842000_172847600
ES.20961.43	chr2	+	1756	11	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	2208	60	2201	-60	3prime_fragment	FALSE	canonical	3	1013	junction_9	102.801215946116	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCCCCTTCATCCCTT	NA	False	NA	25	True	AATAAA	-14	NA	172844117	172857472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.44	chr2	+	4876	7	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	-1362	-59	intron_retention	FALSE	non_canonical	1	6	junction_4	449.670126005967	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172847074	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172848761_172849852_172849940_172850036_172850109_172851162_172851544_172851991_172854049_172854419_172854615_172857075
ES.20961.45	chr2	+	5484	5	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	-1151	-59	intron_retention	FALSE	canonical	3	1094	junction_3	116.469684896972	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172847285	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172848761_172849852_172849940_172850036_172850109_172851162_172854615_172857075
ES.20961.46	chr2	+	4614	1	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	-596	-58	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	528	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172852860	172857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172852900_172857500
ES.20961.5	chr2	+	1191	4	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	5	9844	-2	-3549	5prime_fragment	FALSE	canonical	3	1114	junction_3	78.4984076271615	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAGGGTTATGAGTC	NA	False	NA	NA	False	NA	NA	NA	172841914	172847688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952
ES.20961.6	chr2	+	3273	1	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	13	-6035	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAACCAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	172841929	172845202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172841900_172845200
ES.20961.7	chr2	+	3165	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	13	-59	intron_retention	FALSE	canonical	3	57	junction_1	341.903144179752	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCCCTTCATCCCTTT	NA	False	NA	26	True	AATAAA	-15	NA	172841929	172857473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.8	chr2	+	3405	11	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	15	-61	intron_retention	FALSE	canonical	1	1	junction_3	365.374328600136	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGCCCCTTCATCCCT	NA	False	NA	24	True	AATAAA	-13	NA	172841931	172857471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172847244_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ES.20961.9	chr2	+	3857	11	NNC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	16	-9	intron_retention	FALSE	non_canonical	1	6	junction_8	362.226793597602	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATAATGCTATGTTCC	NA	False	NA	76	True	NA	NA	NA	172841932	172857523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851544_172851991_172854049_172854419_172854615_172857075
ES.20962.1	chr2	+	1791	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	-14	-9	-11	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863680	172876527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ES.20962.2	chr2	+	1495	5	NNC	ENSMUSG00000027510.18	novel	1768	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_4	315.665566699949	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	172863685	172876518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298_172875797_172876078
ES.20962.3	chr2	+	2284	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	757	junction_2	26	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAGGTGGTTTGAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	172863701	172876520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172864709_172865119_172865175_172875298
ES.20962.4	chr2	+	1877	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173720.2	620	4	-182	-1075	16	0	multi-exon	FALSE	canonical	3	8	junction_1	365.954763446097	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	172863721	172876518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172864200_172864584_172864709_172865119_172865175_172875298
ES.20962.5	chr2	+	1722	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173878.8	936	4	30	-816	16	1	multi-exon	FALSE	canonical	0	0	junction_1	369.719713657071	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTGGTTTGAGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	172863721	172876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_172864041_172864584_172864709_172865119_172865175_172875298
ES.20962.7	chr2	+	1733	4	NNC	ENSMUSG00000027510.18	novel	1768	4	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	369.719713657071	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	172863723	172876518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_172864058_172864584_172864709_172865119_172865175_172875298
ES.20962.8	chr2	+	4815	1	NIC	ENSMUSG00000027510.18	novel	2071	5	NA	NA	6870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172871712	172876527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_172871700_172876500
ES.20963.1	chr2	+	164	1	Intergenic	novelGene_17347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGAGAGAGAGAGAGTAG	NA	False	NA	NA	False	NA	NA	NA	172880643	172880807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_172880600_172880800
ES.20964.1	chr2	-	3940	11	NNC	ENSMUSG00000070495.12	novel	3217	11	NA	NA	54	747	intron_retention	FALSE	canonical	0	0	junction_4	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATGTGCAAATGGTA	NA	False	NA	NA	False	AATAAA	-28	NA	172961264	172934654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172936606_172937121_172937243_172943674_172943858_172947824_172947986_172949501_172949652_172949975_172950097_172954036_172954171_172955335_172955507_172958970_172959197_172960053_172960593_172961081
ES.20964.2	chr2	-	5093	11	NNC	ENSMUSG00000070495.12	novel	3217	11	NA	NA	166	744	intron_retention	FALSE	canonical	1	1	junction_1	1.61554944214035	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGTGATGTGCAAATG	NA	False	NA	NA	False	AATAAA	-25	NA	172961152	172934657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_172936606_172937121_172937243_172943674_172943858_172947824_172949254_172949501_172949652_172949975_172950097_172954036_172954171_172955335_172955507_172958970_172959197_172960053_172960593_172961081
ES.20965.1	chr2	+	440	1	Intergenic	novelGene_17348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAACAAAAAAA	4127	False	NA	NA	False	NA	NA	NA	173086932	173087372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_173086900_173087400
ES.20966.1	chr2	+	5208	1	Intergenic	novelGene_17349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGCCAAGTGACGACTG	NA	False	NA	NA	False	NA	NA	NA	173106050	173111258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_173106000_173111300
ES.20967.1	chr2	+	1003	1	Genic_Genomic	ENSMUSG00000087600.2	novel	NA	NA	NA	NA	-2	-730	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTTGTTATTTATTTT	7637	False	NA	NA	False	ATTAAA	-19	NA	173118488	173119491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_173118500_173119500
ES.20968.1	chr2	-	3888	1	NIC	ENSMUSG00000038400.16	novel	4538	4	NA	NA	6377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCCCTTTTTTGGCTG	NA	False	NA	NA	False	AATAAA	-25	NA	173070138	173066250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173066200_173070100
ES.20968.2	chr2	-	4615	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-79	2	-79	-2	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTCTCCCTTTTTTGGC	1003	False	NA	NA	False	AATAAA	-23	NA	173118405	173066252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.3	chr2	-	4481	2	ISM	ENSMUSG00000038400.16	ENSMUST00000124124.2	600	3	3189	-1390	3189	1225	3prime_fragment	FALSE	canonical	3	95	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTAGTTTTTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	173073326	173068613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_173070137_173070368
ES.20968.4	chr2	-	2374	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-200	2364	-200	1224	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTAGTTTTTTTTTTTT	882	False	NA	-6	True	AATAAA	-14	NA	173118526	173068614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.5	chr2	-	1836	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-2	2704	-2	884	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTCTAGAGAGTGTGT	1080	False	NA	NA	False	AATATA	-23	NA	173118328	173068954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.6	chr2	-	1731	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	2	2805	2	783	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAACCTACA	1084	False	NA	NA	False	NA	NA	NA	173118324	173069055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.7	chr2	-	1557	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	44	2937	44	651	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGAGAGCAGGAGTA	1126	False	NA	NA	False	NA	NA	NA	173118282	173069187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.8	chr2	-	1279	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	-46	3305	-46	283	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCGCACTTCTTAAGAG	1036	False	NA	NA	False	NA	NA	NA	173118372	173069555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ES.20968.9	chr2	-	3665	1	Genic_Genomic	ENSMUSG00000038400.16	novel	NA	NA	NA	NA	-115	-44773	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGTCTGCGAAACGGCT	967	False	NA	NA	False	NA	NA	NA	173118441	173114776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_173114800_173118400
ES.20969.1	chr2	+	223	1	Intergenic	novelGene_17350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	173129581	173129804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_173129600_173129800
ES.2097.1	chr1	+	177	2	Antisense	novelGene_ENSMUSG00000103018.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	226	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181834972	182019216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181834983_182019049
ES.2097.10	chr1	+	1356	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	1	10	1	-10	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGGATTTCTTGTAT	NA	False	NA	16	True	AATAAA	-24	NA	181952315	181959962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181956248_181956318_181958900
ES.2097.11	chr1	+	655	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	53	115	9	-1	multi-exon	FALSE	canonical	3	66	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTATGTTTCTTTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	181952354	181959369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181958900
ES.2097.12	chr1	+	1257	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	53	-487	9	-1	multi-exon	FALSE	canonical	3	66	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTATAGGTTTCTT	NA	False	NA	25	True	AATAAA	-33	NA	181952354	181959971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181958900
ES.2097.13	chr1	+	574	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	46	747	15	-145	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTTGCAGATAATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	181952360	181959225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181956248_181956318_181958900
ES.2097.14	chr1	+	1100	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	46	221	15	-221	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTAGCTTGTATTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	181952360	181959751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181956248_181956318_181958900
ES.2097.15	chr1	+	699	3	NNC	ENSMUSG00000026511.8	novel	1367	3	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	510	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTATGTTTCTTTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	181952370	181959369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_181952541_181956257_181956318_181958900
ES.2097.16	chr1	+	3982	1	FSM	ENSMUSG00000026511.8	ENSMUST00000193005.2	1107	1	-2281	-594	-2281	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGATTTCTTGTATAG	NA	False	NA	18	True	AATAAA	-26	NA	181955982	181959964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181956000_181960000
ES.2097.17	chr1	+	177	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	182019040	182019217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_182019000_182019200
ES.2097.2	chr1	+	195	1	Antisense	novelGene_ENSMUSG00000102760.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGCTATGTGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	181834973	181835168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181835000_181835200
ES.2097.3	chr1	+	6491	1	Antisense	novelGene_ENSMUSG00000022995.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATCCCATACATACTTC	NA	False	NA	NA	False	AATAAA	-16	NA	181837946	181844437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_181837900_181844400
ES.2097.4	chr1	+	1757	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTTCTCATTTTTGC	5134	False	NA	NA	False	AATAAA	-23	NA	181847692	181849449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181847700_181849400
ES.2097.5	chr1	+	671	2	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAACAGGTCTGAGTA	5212	False	NA	NA	False	TTTAAA	-25	NA	181847770	181857450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181847834_181856842
ES.2097.6	chr1	+	1434	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAACAGGTCTGAGTA	2244	False	NA	NA	False	TTTAAA	-25	NA	181856016	181857450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181856000_181857400
ES.2097.7	chr1	+	948	2	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAATAAATAAATCCAAAA	2278	False	NA	NA	False	NA	NA	NA	181856050	181857380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181856461_181856842
ES.2097.8	chr1	+	165	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATCTATAACCACCA	NA	False	NA	NA	False	NA	NA	NA	181871073	181871238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_181871100_181871200
ES.2097.9	chr1	+	766	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	-2	603	-2	-1	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTATGTTTCTTTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	181952312	181959369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_181952541_181956248_181956318_181958900
ES.20970.1	chr2	-	178	1	Intergenic	novelGene_17351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	173191083	173190905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_173190900_173191100
ES.20971.1	chr2	-	180	1	Intergenic	novelGene_17352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCATGGTGGCTCAC	9038	False	NA	NA	False	NA	NA	NA	173204879	173204699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_173204700_173204900
ES.20972.1	chr2	-	4424	5	Intergenic	novelGene_17353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTGAGTTGTTACTG	NA	False	NA	NA	False	NA	NA	NA	173308369	173301723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_173305661_173306053_173306128_173306311_173306391_173307747_173307917_173308204
ES.20973.1	chr2	-	1515	1	Intergenic	novelGene_17354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTGGTGTTTGGT	NA	False	NA	NA	False	AAAAAG	-3	NA	173377294	173375779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_173375800_173377300
ES.20974.1	chr2	-	8267	4	ISM	ENSMUSG00000055897.14	ENSMUST00000154908.2	2399	5	792	-6547	241	399	intron_retention	FALSE	canonical	3	15	junction_3	3.74165738677394	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATTCTGTGTTCTGTA	4411	False	NA	NA	False	TTTAAA	-15	NA	173432314	173421831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297
ES.20974.10	chr2	-	3426	10	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	0	164	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	6.68331255192114	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGTGAGAACTGAAGG	NA	False	NA	NA	False	TTTAAA	-14	NA	173501161	173426533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431630_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115
ES.20974.11	chr2	-	3532	12	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.00871937588181	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAGTGTACTCATTTT	NA	False	NA	3	True	TATAAA	-18	NA	173501330	173426692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431775_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457273_173457370_173501115_173501161_173501305
ES.20974.12	chr2	-	4244	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	5	5	intron_retention	FALSE	canonical	3	8	junction_5	6.36867333123626	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAGTGTACTCATTTT	NA	False	NA	3	True	TATAAA	-18	NA	173501323	173426692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ES.20974.13	chr2	-	3578	13	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.27474168553137	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAGTGTACTCATTTT	NA	False	NA	3	True	TATAAA	-18	NA	173501335	173426692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173487249_173487352_173487950_173488019_173501115_173501161_173501305
ES.20974.14	chr2	-	4385	12	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-2	5	intron_retention	FALSE	canonical	0	0	junction_9	8.86072213164451	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAACAGTGTACTCATTTT	NA	False	NA	3	True	TATAAA	-18	NA	173501330	173426692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431082_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457273_173457370_173501115_173501161_173501305
ES.20974.15	chr2	-	4318	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	0	2	intron_retention	FALSE	canonical	3	8	junction_5	5.15751878329105	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAACAGTGTACTCAT	NA	False	NA	0	True	TATAAA	-15	NA	173501161	173426695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173501115
ES.20974.16	chr2	-	3420	11	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.87400787401181	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAACAGTGTACTCAT	NA	False	NA	0	True	TATAAA	-15	NA	173501331	173426695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431761_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ES.20974.17	chr2	-	3490	12	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.63203340429649	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAACAGTGTACTCAT	NA	False	NA	0	True	TATAAA	-15	NA	173501324	173426695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431744_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.18	chr2	-	3324	11	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.15914843203232	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAACAGTGTACTCAT	NA	False	NA	0	True	TATAAA	-15	NA	173501335	173426695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431630_173433909_173434015_173434594_173434839_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ES.20974.19	chr2	-	3621	13	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.16931779844547	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGTAACAGTGTACTC	NA	False	NA	-2	True	TATAAA	-13	NA	173501324	173426697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431775_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173487249_173487352_173501115_173501161_173501305
ES.20974.2	chr2	-	5188	13	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-4	1565	intron_retention	TRUE	canonical	0	0	junction_8	9.29007833958119	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATTCAAGGGACTGATG	NA	False	NA	NA	False	ATTAAA	-22	NA	173501336	173425132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173448934_173449123_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.20	chr2	-	3326	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	7.4222638056054	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGTAACAGTGTACTC	NA	False	NA	-2	True	TATAAA	-13	NA	173501325	173426697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.22	chr2	-	3595	13	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	8.9174454488566	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGTAACAGTGTACTC	NA	False	NA	-2	True	TATAAA	-13	NA	173501331	173426697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173487249_173487352_173501115_173501161_173501305
ES.20974.23	chr2	-	4065	7	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	-2853	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	6.91415617089718	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGCCCTCAAAGGTAACA	766	False	NA	-10	True	TATAAA	-5	NA	173435959	173426705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431630_173433909_173434015_173434594
ES.20974.24	chr2	-	4654	4	ISM	ENSMUSG00000055897.14	ENSMUST00000154908.2	2399	5	-476	-1666	-476	-15	intron_retention	FALSE	canonical	3	15	junction_3	3.74165738677394	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGCCATGCCCTCAAA	3143	False	NA	-17	True	AATGAA	-8	NA	173433582	173426712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297
ES.20974.25	chr2	-	3182	12	NNC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	4	-192	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	7.42677755109095	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTATGTTTGTTGTTG	NA	False	NA	NA	False	TTTAAA	-30	NA	173501324	173426889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431630_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.26	chr2	-	3370	12	NIC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	0	-196	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	6.53661018627184	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGTGTATGTTTGTT	NA	False	NA	NA	False	TTTAAA	-26	NA	173501161	173426893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173457370_173501115
ES.20974.27	chr2	-	2910	10	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	3	-196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.07309140559716	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGTGTATGTTTGTT	NA	False	NA	NA	False	TTTAAA	-26	NA	173501325	173426893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.28	chr2	-	3321	12	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	4	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.74241111285186	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGTGTATGTTTGTT	NA	False	NA	NA	False	TTTAAA	-26	NA	173501324	173426893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434839_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.29	chr2	-	3329	13	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	3	-197	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	8.89600409672168	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTATGTTTGT	NA	False	NA	NA	False	TTTAAA	-25	NA	173501325	173426894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173457370_173487249_173487352_173501115_173501161_173501305
ES.20974.3	chr2	-	5896	12	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	0	1482	intron_retention	FALSE	canonical	2	5	junction_9	5.71065409983251	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACCAATTCATTTTGTT	NA	False	NA	NA	False	AAGAAA	-12	NA	173501161	173425215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173457370_173501115
ES.20974.30	chr2	-	4072	5	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-2521	-200	intron_retention	FALSE	canonical	2	2	junction_4	8.04285397107271	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGCATGTGTATGTT	1098	False	NA	NA	False	TTTAAA	-22	NA	173435627	173426897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909
ES.20974.31	chr2	-	4038	10	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-1	-200	intron_retention	FALSE	canonical	0	0	junction_9	7.90842651078855	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGCATGTGTATGTT	NA	False	NA	NA	False	TTTAAA	-22	NA	173501329	173426897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431082_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501305
ES.20974.32	chr2	-	5133	7	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-3153	-200	intron_retention	FALSE	canonical	3	8	junction_5	4.88762609953839	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGCATGTGTATGTT	466	False	NA	NA	False	TTTAAA	-22	NA	173436259	173426897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434015_173434594
ES.20974.33	chr2	-	3162	9	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	4068	-201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.46240577829965	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGCATGTGTATGT	NA	False	NA	NA	False	TTTAAA	-21	NA	173446543	173426898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173446298
ES.20974.34	chr2	-	4088	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-3	-201	intron_retention	FALSE	canonical	2	3	junction_3	7.7614431647729	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGCATGTGTATGT	NA	False	NA	NA	False	TTTAAA	-21	NA	173501335	173426898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431082_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ES.20974.35	chr2	-	1389	10	NNC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	-19	-383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.62711213410245	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTGAAGTTTAGTCAT	NA	False	NA	NA	False	NA	NA	NA	173450630	173428761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_173428909_173429625_173429715_173430959_173431082_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434839_173438832_173438981_173441382_173441481_173450525
ES.20974.36	chr2	-	5508	3	NIC	ENSMUSG00000055897.14	novel	737	5	NA	NA	4167	4	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	1	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTCTCTTTCTCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	173446444	173437894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173438193_173438832_173438981_173441382
ES.20974.37	chr2	-	3642	1	NIC	ENSMUSG00000055897.14	novel	367	3	NA	NA	7767	-32690	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATGCCTGACTTGAAG	NA	False	NA	NA	False	AATGAA	-38	NA	173493394	173489752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173489800_173493400
ES.20974.4	chr2	-	5559	7	ISM	ENSMUSG00000055897.14	ENSMUST00000153162.8	4552	13	66418	-1459	-1808	1459	3prime_fragment	FALSE	canonical	0	0	junction_6	7.57187779440036	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGAAACAAACAAG	1811	False	NA	NA	False	NA	NA	NA	173434914	173425238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434127_173434594
ES.20974.5	chr2	-	3372	10	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-3	183	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	8.97871282259419	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTTTCTCTTGCTTG	NA	False	NA	NA	False	TTTAAA	-33	NA	173501335	173426514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173457275_173457370_173501115_173501161_173501305
ES.20974.6	chr2	-	3554	10	NIC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	0	180	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	6.44252845081077	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGATGCTTTCTCTTGC	NA	False	NA	NA	False	TTTAAA	-30	NA	173501161	173426517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115
ES.20974.7	chr2	-	3506	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	3	180	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	7.4222638056054	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGATGCTTTCTCTTGC	NA	False	NA	NA	False	TTTAAA	-30	NA	173501325	173426517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173457275_173457370_173501115_173501161_173501305
ES.20974.8	chr2	-	4429	11	NIC	ENSMUSG00000055897.14	novel	4552	13	NA	NA	-3	178	intron_retention	FALSE	canonical	3	8	junction_5	6.36867333123626	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAGATGCTTTCTCTT	NA	False	NA	NA	False	TTTAAA	-28	NA	173501335	173426519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173432590_173433909_173434015_173434594_173434808_173438832_173438981_173450525_173450673_173501115_173501161_173501305
ES.20974.9	chr2	-	7137	6	NIC	ENSMUSG00000055897.14	novel	4466	15	NA	NA	-3459	178	intron_retention	FALSE	canonical	3	13	junction_4	3.96988664825584	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAGATGCTTTCTCTT	160	False	NA	NA	False	TTTAAA	-28	NA	173436565	173426519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173434015_173434594
ES.20975.1	chr2	+	1950	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	-155	5360	-155	829	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTTCAGTATTCACT	NA	False	NA	NA	False	NA	NA	NA	173501397	173543776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.10	chr2	+	6949	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	99	-3	3	3	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCGTGTTTCAGCCTCCA	NA	False	NA	2	True	AATAAA	-15	NA	173501651	173549111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.11	chr2	+	723	6	ISM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	102	11352	6	-5163	5prime_fragment	FALSE	canonical	3	172	junction_3	16.2308348522188	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTAGTAAGTATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	173501654	173537784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682
ES.20975.12	chr2	+	1748	6	NIC	ENSMUSG00000027519.11	novel	7155	7	NA	NA	8	809	intron_retention	FALSE	canonical	3	160	junction_5	20.9055016682212	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATTAATAACTTCTG	NA	False	NA	NA	False	NA	NA	NA	173501656	173543756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173537159_173537682_173537793_173542814
ES.20975.13	chr2	+	1911	6	NIC	ENSMUSG00000027519.11	novel	7155	7	NA	NA	63	1027	intron_retention	FALSE	canonical	3	160	junction_5	20.9055016682212	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCCTGACTAGTCCTT	NA	False	NA	3	True	AATAAA	-16	NA	173501711	173543974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173537159_173537682_173537793_173542814
ES.20975.14	chr2	+	2092	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	195	4868	99	1321	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGGAAATTTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	173501747	173544268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.16	chr2	+	1635	7	NNC	ENSMUSG00000027519.11	novel	7045	6	NA	NA	497	1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.2036719520821	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGACTAGTCCTTCCT	NA	False	NA	6	True	AATAAA	-19	NA	173502145	173543977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173502167_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.17	chr2	+	5488	1	NIC	ENSMUSG00000027519.11	novel	7045	6	NA	NA	39299	-2673	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTGCTTGGTCTCC	NA	False	NA	NA	False	AATAAA	-32	NA	173540947	173546435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173540900_173546400
ES.20975.2	chr2	+	5259	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	50	1846	-46	-1818	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGTGCCTTTTTATTATG	NA	False	NA	NA	False	AATAAA	-22	NA	173501602	173547290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.3	chr2	+	1945	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	51	5159	-45	1030	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGACTAGTCCTTCCT	NA	False	NA	6	True	AATAAA	-19	NA	173501603	173543977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.4	chr2	+	3355	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	52	3748	-44	2441	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTCCTTCAGTGTAA	NA	False	NA	NA	False	ATTAAA	-23	NA	173501604	173545388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.5	chr2	+	7066	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	87	2	-9	-2	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTGTGGCATTCATTA	NA	False	NA	25	True	AATAAA	-38	NA	173501639	173549134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20975.6	chr2	+	7003	5	NIC	ENSMUSG00000027519.11	novel	7155	7	NA	NA	-6	1028	intron_retention	FALSE	canonical	3	172	junction_3	18.1245689603919	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTGACTAGTCCTTC	NA	False	NA	4	True	AATAAA	-17	NA	173501642	173543975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173537159_173537682
ES.20975.7	chr2	+	1822	6	NNC	ENSMUSG00000027519.11	novel	7045	6	NA	NA	-6	1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.731599785137	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGCCTGACTAGTCCT	NA	False	NA	2	True	AATAAA	-15	NA	173501642	173543973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537680_173537793_173542814
ES.20975.8	chr2	+	6920	6	ISM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	93	5164	-3	1025	intron_retention	FALSE	canonical	3	172	junction_3	16.2308348522188	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAAGCCTGACTAGTCC	NA	False	NA	1	True	AATAAA	-14	NA	173501645	173543972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682
ES.20975.9	chr2	+	1600	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	99	5346	3	815	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAACTTCTGAATTCC	NA	False	NA	NA	False	NA	NA	NA	173501651	173543762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ES.20976.1	chr2	-	3914	1	Intergenic	novelGene_17355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACTGGTAAGATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	173512901	173508987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_173509000_173512900
ES.20977.1	chr2	+	1984	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	69	4979	69	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579372	173621153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
ES.20977.2	chr2	+	5521	1	ISM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	41308	0	10619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATTCCGTGTATAATT	NA	False	NA	NA	False	AATAAA	-25	NA	173620611	173626132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173620600_173626100
ES.20978.1	chr2	-	2614	1	Antisense	novelGene_ENSMUSG00000054455.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGCACCATTTGGGAA	NA	False	NA	NA	False	AAAACA	-27	NA	173625627	173623013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_173623000_173625600
ES.20979.1	chr2	-	123	1	FSM	ENSMUSG00000082543.2	ENSMUST00000117491.2	475	1	413	-61	413	61	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCCTCAAGCAAGTT	NA	False	NA	NA	False	AATAAA	-44	NA	173762206	173762083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_173762100_173762200
ES.2098.1	chr1	-	11387	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	234	-8016	-80	0	3prime_fragment	FALSE	canonical	3	22	junction_3	127.62077113264	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTATTCATTTTTC	5867	False	NA	0	True	AATAAA	-24	NA	181847321	181723948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.10	chr1	-	5659	14	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-86	1839	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTTAAATGTAGCAGT	5547	False	NA	-30	True	ATTAAA	-17	NA	181847641	181730125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.100	chr1	-	1179	1	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	836	-379	mono-exon	FALSE	NA	NA	NA	NA	NA	724	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACCAAGTACTTAAT	NA	False	NA	NA	False	AGTAAA	-7	NA	181733567	181732388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181732400_181733600
ES.2098.103	chr1	-	2983	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-276	8522	43	418	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACTATCTTTTTTT	5686	False	NA	NA	False	TTTAAA	-6	NA	181847502	181732470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.104	chr1	-	2918	14	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	9	127	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTACAATGCTTTACCAA	5652	False	NA	-5	True	ATTAAA	-21	NA	181847536	181732761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.105	chr1	-	2736	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-320	8813	-1	127	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTACAATGCTTTACCAA	5642	False	NA	-5	True	ATTAAA	-21	NA	181847546	181732761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.106	chr1	-	4441	14	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	1	124	intron_retention	FALSE	canonical	3	22	junction_3	104.267861694045	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTACAATGCTTTAC	5644	False	NA	-8	True	ATTAAA	-18	NA	181847544	181732764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.107	chr1	-	2769	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-1	103	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATTTAGATGCCTTCC	5642	False	NA	-29	True	CATAAA	-15	NA	181847546	181732785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.108	chr1	-	2634	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-390	8985	-61	-45	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTATGTGCTTTCAGA	5572	False	NA	-13	True	CATAAA	-15	NA	181847616	181732933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.109	chr1	-	4318	13	NIC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	96	-47	intron_retention	FALSE	canonical	3	260	junction_8	51.5306677835852	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTTGTATGTGCTTTCA	5739	False	NA	-15	True	CATAAA	-13	NA	181847449	181732935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.110	chr1	-	3283	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-309	-142	10	-47	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTTGTATGTGCTTTCA	5653	False	NA	-15	True	CATAAA	-13	NA	181847535	181732935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.111	chr1	-	2859	14	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	-96	-47	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTTGTATGTGCTTTCA	5537	False	NA	-15	True	CATAAA	-13	NA	181847651	181732935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.112	chr1	-	5649	2	FSM	ENSMUSG00000022995.17	ENSMUST00000191649.2	872	2	-4673	-104	1086	-50	multi-exon	FALSE	canonical	3	407	junction_1	0	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGAGTTGTATGTGCTT	NA	False	NA	-18	True	CATAAA	-10	NA	181739076	181732938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951
ES.2098.113	chr1	-	2431	14	NNC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	17	-53	intron_retention	FALSE	non_canonical	0	0	junction_9	107.693021975653	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGGAGTTGTATGTG	5660	False	NA	-21	True	CATAAA	-7	NA	181847528	181732941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749322_181751219_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.114	chr1	-	2614	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-2	-53	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGGAGTTGTATGTG	5641	False	NA	-21	True	CATAAA	-7	NA	181847547	181732941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.115	chr1	-	2515	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-395	9109	-66	13	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGCTGATGAAGAATTTGA	5567	False	NA	-7	True	AATAAA	-34	NA	181847621	181733057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.116	chr1	-	3934	14	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-698	11	intron_retention	FALSE	canonical	0	0	junction_13	109.20243402797	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGCTGATGAAGAATTT	4935	False	NA	-9	True	AATAAA	-32	NA	181848253	181733059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181846305
ES.2098.118	chr1	-	1692	12	NNC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	50	4	intron_retention	FALSE	non_canonical	0	0	junction_7	114.22632311583	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGGGCGCTGATGA	5693	False	NA	-16	True	AATAAA	-25	NA	181847495	181733066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746121_181751368_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.119	chr1	-	3157	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-321	-4	-2	-3	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTTTTCCAGAGGGCG	5641	False	NA	-23	True	AATAAA	-18	NA	181847547	181733073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.12	chr1	-	8505	6	NNC	ENSMUSG00000022995.17	novel	1971	13	NA	NA	-936	1838	intron_retention	FALSE	non_canonical	2	23	junction_1	153.708295156768	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACTTTAAATGTAGCAG	NA	False	NA	-31	True	ATTAAA	-16	NA	181745861	181730126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181740939_181744763_181744813_181745822
ES.2098.120	chr1	-	2579	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-89	-3	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTTTTCCAGAGGGCG	5544	False	NA	-23	True	AATAAA	-18	NA	181847644	181733073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.121	chr1	-	4713	3	FSM	ENSMUSG00000022995.17	ENSMUST00000195703.6	739	3	-4160	186	33	3	multi-exon	FALSE	canonical	3	407	junction_1	13	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTTTTCCAGAGGGC	NA	False	NA	-24	True	AATAAA	-17	NA	181740129	181733074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862
ES.2098.122	chr1	-	2466	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	28	1111	18	2	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTTTTTCCAGAGGG	5661	False	NA	-25	True	AATAAA	-16	NA	181847527	181733075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.123	chr1	-	2462	13	NIC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-89	2	intron_retention	FALSE	canonical	0	0	junction_5	112.558873484057	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTTTTTCCAGAGGG	5544	False	NA	-25	True	AATAAA	-16	NA	181847644	181733075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.124	chr1	-	2161	13	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	-5409	-1	intron_retention	FALSE	canonical	3	25	junction_9	105.599183235478	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGATTTTTTTCCAGA	NA	False	NA	-28	True	AATAAA	-13	NA	181789486	181733078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318
ES.2098.125	chr1	-	4126	9	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	-2	20	intron_retention	FALSE	canonical	0	0	junction_5	128.161945892687	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGTATTTAAACATCTA	5641	False	NA	NA	False	NA	NA	NA	181847547	181738252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.126	chr1	-	3934	1	FSM	ENSMUSG00000022995.17	ENSMUST00000192768.2	1890	1	-2024	-20	-2024	20	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGTATTTAAACATCTA	NA	False	NA	NA	False	NA	NA	NA	181742186	181738252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181738300_181742200
ES.2098.127	chr1	-	4493	6	ISM	ENSMUSG00000022995.17	ENSMUST00000078719.13	2889	15	96755	5175	858	20	internal_fragment	FALSE	canonical	3	269	junction_4	52.2095776654054	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGTATTTAAACATCTA	NA	False	NA	NA	False	NA	NA	NA	181750471	181738252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222
ES.2098.128	chr1	-	4501	11	ISM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-304	14304	15	20	5prime_fragment	FALSE	canonical	3	260	junction_6	53.0212221662232	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGTATTTAAACATCTA	5658	False	NA	NA	False	NA	NA	NA	181847530	181738252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.129	chr1	-	1205	2	Genic_Genomic	ENSMUSG00000022995.17	novel	3572	16	NA	NA	553	-11	multi-exon	FALSE	non_canonical	0	0	junction_1	0	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAGAAAGGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	181739609	181738283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_181738476_181738596
ES.2098.13	chr1	-	5337	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	105	-1837	95	1837	3prime_fragment	FALSE	canonical	3	22	junction_3	127.62077113264	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACTTTAAATGTAGCA	5738	False	NA	-32	True	ATTAAA	-15	NA	181847450	181730127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.130	chr1	-	2635	5	ISM	ENSMUSG00000022995.17	ENSMUST00000111025.8	3385	15	47	17594	47	1160	5prime_fragment	FALSE	canonical	3	327	junction_2	38.0419176698547	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTCCGTCACCAACA	5690	False	NA	NA	False	NA	NA	NA	181847498	181749603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.131	chr1	-	1969	5	ISM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-318	17238	1	448	5prime_fragment	FALSE	canonical	3	327	junction_2	38.0419176698547	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCCTTGTAGAGGATAA	5644	False	NA	NA	False	AATAAA	-14	NA	181847544	181750315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.132	chr1	-	205	2	Genic_Genomic	ENSMUSG00000022995.17	novel	5962	1	NA	NA	626	-973	multi-exon	TRUE	non_canonical	0	0	junction_1	0	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATTATACTTCACTTTA	NA	False	NA	NA	False	NA	NA	NA	181767524	181751736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_181751762_181767344
ES.2098.133	chr1	-	202	1	FSM	ENSMUSG00000022995.17	ENSMUST00000195461.2	5962	1	624	5136	624	-5136	mono-exon	FALSE	NA	NA	NA	NA	NA	581	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTGAACAGAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	181767526	181767324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181767300_181767500
ES.2098.134	chr1	-	7980	1	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	43	-55847	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAGAAAAGAAA	5686	False	NA	NA	False	NA	NA	NA	181847502	181839522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181839500_181847500
ES.2098.135	chr1	-	1686	1	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	43	-62141	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGTTGAACACAGACCC	5686	False	NA	NA	False	NA	NA	NA	181847502	181845816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181845800_181847500
ES.2098.136	chr1	-	4369	2	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGTACTTGTCTTTC	6835	False	NA	NA	False	AATAAA	-15	NA	181858827	181852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181856457_181858607
ES.2098.137	chr1	-	3527	2	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAAAATGTACGTGTG	6762	False	NA	NA	False	AATAAA	-26	NA	181858900	181853222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181856457_181858607
ES.2098.138	chr1	-	3192	2	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTTCTTTGGTGGTT	6947	False	NA	NA	False	AATGAA	-4	NA	181858715	181853372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181856457_181858607
ES.2098.139	chr1	-	975	2	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTAATCAACACACTTT	6861	False	NA	NA	False	GATAAA	-21	NA	181858801	181855675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181856457_181858607
ES.2098.14	chr1	-	5468	16	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	21	1837	intron_retention	FALSE	canonical	3	11	junction_13	157.553884962151	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACTTTAAATGTAGCA	5664	False	NA	-32	True	ATTAAA	-15	NA	181847524	181730127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.15	chr1	-	5620	15	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	1	1836	intron_retention	FALSE	non_canonical	0	0	junction_8	165.123948497324	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAACTTTAAATGTAGC	5644	False	NA	-33	True	ATTAAA	-14	NA	181847544	181730128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746147_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.16	chr1	-	5421	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	4	1836	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAACTTTAAATGTAGC	5647	False	NA	-33	True	ATTAAA	-14	NA	181847541	181730128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.17	chr1	-	4626	14	NNC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	3387	1836	intron_retention	FALSE	non_canonical	0	0	junction_13	149.917097406115	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAACTTTAAATGTAGC	NA	False	NA	-33	True	ATTAAA	-14	NA	181764763	181730128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181764714
ES.2098.18	chr1	-	5280	13	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	21	1836	intron_retention	FALSE	canonical	0	0	junction_3	111.332335324868	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAACTTTAAATGTAGC	5664	False	NA	-33	True	ATTAAA	-14	NA	181847524	181730128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.2	chr1	-	8411	2	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	1991	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAAGAGATTTGTATTC	NA	False	NA	-7	True	AATAAA	-17	NA	181732412	181723955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181729836_181729881
ES.2098.20	chr1	-	5496	15	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	12	1835	intron_retention	FALSE	non_canonical	0	0	junction_1	131.162482969695	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAACTTTAAATGTAG	5655	False	NA	-34	True	ATTAAA	-13	NA	181847533	181730129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731965_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.21	chr1	-	4697	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	41	1835	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAACTTTAAATGTAG	5684	False	NA	-34	True	ATTAAA	-13	NA	181847504	181730129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731964_181732592_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.22	chr1	-	6100	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-320	-2948	-1	1835	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAACTTTAAATGTAG	5642	False	NA	-34	True	ATTAAA	-13	NA	181847546	181730129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.24	chr1	-	5191	14	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	1466	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTCTGCAATGATGTG	5642	False	NA	2	True	AATAAA	-40	NA	181847546	181730498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.25	chr1	-	5360	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	-291	-1464	-291	1464	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTTCTGCAATGATG	5342	False	NA	0	True	AATAAA	-38	NA	181847846	181730500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.26	chr1	-	4998	16	NNC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-2	1464	intron_retention	FALSE	non_canonical	0	0	junction_9	147.399592943807	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTTCTGCAATGATG	5641	False	NA	0	True	AATAAA	-38	NA	181847547	181730500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749256_181749312_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.27	chr1	-	5193	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-516	6552	-187	1464	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTTCTGCAATGATG	5446	False	NA	0	True	AATAAA	-38	NA	181847742	181730500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.29	chr1	-	5171	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-110	1462	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGTCTTCTGCAATGA	5523	False	NA	-2	True	AATAAA	-36	NA	181847665	181730502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.3	chr1	-	5445	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-276	6060	43	1956	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATTTCCTCATTAGA	5686	False	NA	87	True	NA	NA	NA	181847502	181730008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.30	chr1	-	4949	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	1	1461	intron_retention	FALSE	non_canonical	2	23	junction_1	100.521928768132	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATGGTCTTCTGCAATG	5634	False	NA	-3	True	AATAAA	-35	NA	181847554	181730503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.31	chr1	-	5745	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-339	-2574	-10	1461	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATGGTCTTCTGCAATG	5623	False	NA	-3	True	AATAAA	-35	NA	181847565	181730503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.32	chr1	-	5284	2	FSM	ENSMUSG00000022995.17	ENSMUST00000191649.2	872	2	-1875	-2537	-309	1459	multi-exon	FALSE	canonical	3	407	junction_1	0	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGATGGTCTTCTGCAA	NA	False	NA	-5	True	AATAAA	-33	NA	181736278	181730505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951
ES.2098.33	chr1	-	4948	16	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	40	1446	intron_retention	FALSE	non_canonical	2	22	junction_4	142.410049582964	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTGTGACACTTAGA	5683	False	NA	-18	True	AATAAA	-20	NA	181847505	181730518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.34	chr1	-	4908	14	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	18	1442	intron_retention	FALSE	canonical	1	1	junction_9	155.787406347019	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5661	False	NA	-22	True	AATAAA	-16	NA	181847527	181730522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.35	chr1	-	4864	13	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	1442	intron_retention	FALSE	canonical	1	1	junction_8	111.175130862177	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5642	False	NA	-22	True	AATAAA	-16	NA	181847546	181730522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.36	chr1	-	4016	10	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	1442	intron_retention	FALSE	non_canonical	0	0	junction_9	124.953719827644	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5642	False	NA	-22	True	AATAAA	-16	NA	181847546	181730522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749487_181847496
ES.2098.37	chr1	-	5101	15	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	-1	1441	intron_retention	FALSE	canonical	0	0	junction_4	131.688194657854	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5642	False	NA	-23	True	AATAAA	-15	NA	181847546	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739289_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.38	chr1	-	5144	16	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	31	1441	intron_retention	FALSE	non_canonical	2	22	junction_4	156.991719526859	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5674	False	NA	-23	True	AATAAA	-15	NA	181847514	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.39	chr1	-	3071	9	NNC	ENSMUSG00000022995.17	novel	1971	13	NA	NA	-2255	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	132.113528357243	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	NA	False	NA	-23	True	AATAAA	-15	NA	181747180	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731957_181732572_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889
ES.2098.4	chr1	-	5530	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	28	-1953	18	1953	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTAATTTCCTCATT	5661	False	NA	84	True	NA	NA	NA	181847527	181730011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.40	chr1	-	5092	15	NNC	ENSMUSG00000022995.17	novel	4231	15	NA	NA	18	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	131.162482969695	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5661	False	NA	-23	True	AATAAA	-15	NA	181847527	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731961_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.41	chr1	-	5177	15	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	51	1441	intron_retention	FALSE	canonical	3	22	junction_3	146.919542746417	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5694	False	NA	-23	True	AATAAA	-15	NA	181847494	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.42	chr1	-	4725	17	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	-2	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	165.847444960723	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5960	False	NA	-23	True	AATAAA	-15	NA	181847228	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731965_181732015_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.43	chr1	-	5222	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	0	1441	intron_retention	FALSE	canonical	3	11	junction_12	149.033912727463	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5643	False	NA	-23	True	AATAAA	-15	NA	181847545	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.44	chr1	-	4878	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	10	1441	intron_retention	TRUE	non_canonical	0	0	junction_10	105.627377403507	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5653	False	NA	-23	True	AATAAA	-15	NA	181847535	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751230_181751314_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.45	chr1	-	5023	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	10	1441	intron_retention	FALSE	canonical	1	1	junction_9	107.452755546595	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5653	False	NA	-23	True	AATAAA	-15	NA	181847535	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749394_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.47	chr1	-	4609	15	NNC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	443	1441	intron_retention	FALSE	canonical	0	0	junction_14	151.178432216196	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	6405	False	NA	-23	True	AATAAA	-15	NA	181846783	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181846753
ES.2098.48	chr1	-	4691	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-13	1441	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5620	False	NA	-23	True	AATAAA	-15	NA	181847568	181730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732267_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.5	chr1	-	5204	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-122	1852	intron_retention	FALSE	non_canonical	0	0	junction_13	109.20243402797	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTCTGTACCCTCTAC	5825	False	NA	-17	True	ATTAAA	-30	NA	181847363	181730112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789487_181847094
ES.2098.50	chr1	-	4068	11	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	87	1440	intron_retention	FALSE	non_canonical	0	0	junction_1	148.674678408934	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTGTTTGTGACA	NA	False	NA	-24	True	AATAAA	-14	NA	181751242	181730524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731968_181732020_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124
ES.2098.51	chr1	-	4770	12	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-2	1440	intron_retention	FALSE	canonical	0	0	junction_5	116.281007594846	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTGTTTGTGACA	5641	False	NA	-24	True	AATAAA	-14	NA	181847547	181730524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.53	chr1	-	3829	6	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	1	1439	intron_retention	FALSE	non_canonical	0	0	junction_1	149.620319475665	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTGTTTGTGAC	5644	False	NA	-25	True	AATAAA	-13	NA	181847544	181730525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731967_181749896_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.54	chr1	-	4572	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	421	1439	intron_retention	FALSE	canonical	0	0	junction_13	109.20243402797	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTGTTTGTGAC	6383	False	NA	-25	True	AATAAA	-13	NA	181846805	181730525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181846753
ES.2098.55	chr1	-	4689	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-609	7149	-280	867	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATCCTCCATGATAGT	5353	False	NA	6	True	NA	NA	NA	181847835	181731097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.56	chr1	-	4021	15	NNC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	445	855	intron_retention	FALSE	canonical	0	0	junction_14	151.178432216196	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGCTGTATCTGTATC	6407	False	NA	-6	True	NA	NA	NA	181846781	181731109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181846753
ES.2098.57	chr1	-	4394	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-55	852	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCATGCTGTATCTGT	5578	False	NA	-9	True	NA	NA	NA	181847610	181731112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731961_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.58	chr1	-	4576	14	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-2	850	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTCATGCTGTATCT	5641	False	NA	-11	True	NA	NA	NA	181847547	181731114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.59	chr1	-	4228	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-83	850	intron_retention	FALSE	non_canonical	0	0	junction_7	108.152423669385	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTCATGCTGTATCT	5550	False	NA	-11	True	NA	NA	NA	181847638	181731114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746121_181747108_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.60	chr1	-	3893	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-1	850	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTCATGCTGTATCT	5961	False	NA	-11	True	NA	NA	NA	181847227	181731114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733186_181733356_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.61	chr1	-	4317	16	NNC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	47	850	intron_retention	FALSE	non_canonical	0	0	junction_8	147.399592943807	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTCATGCTGTATCT	5690	False	NA	-11	True	NA	NA	NA	181847498	181731114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747042_181747116_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.62	chr1	-	5122	14	FSM	ENSMUSG00000022995.17	ENSMUST00000195059.6	2832	14	-328	-1962	1	849	multi-exon	FALSE	canonical	2	7	junction_9	106.013787202057	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGCTCATGCTGTATC	5634	False	NA	-12	True	NA	NA	NA	181847554	181731115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.63	chr1	-	4007	16	NNC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	64	848	intron_retention	FALSE	non_canonical	2	22	junction_4	142.410049582964	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTCATGCTGTAT	6026	False	NA	-13	True	NA	NA	NA	181847162	181731116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.64	chr1	-	6080	14	NIC	ENSMUSG00000022995.17	novel	3572	16	NA	NA	10	848	intron_retention	FALSE	canonical	3	22	junction_3	104.267861694045	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTCATGCTGTAT	5653	False	NA	-13	True	NA	NA	NA	181847535	181731116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.66	chr1	-	4463	15	NIC	ENSMUSG00000022995.17	novel	2889	15	NA	NA	-16	848	intron_retention	FALSE	canonical	3	11	junction_12	129.846298462797	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTCATGCTGTAT	5617	False	NA	-13	True	NA	NA	NA	181847571	181731116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181763224_181763282_181783958_181784137_181789318_181789485_181847094
ES.2098.67	chr1	-	4252	13	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	17	848	intron_retention	FALSE	canonical	1	1	junction_8	111.175130862177	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTCATGCTGTAT	5660	False	NA	-13	True	NA	NA	NA	181847528	181731116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.68	chr1	-	4445	15	NNC	ENSMUSG00000022995.17	novel	4231	15	NA	NA	74	848	intron_retention	FALSE	non_canonical	2	23	junction_1	127.303830681258	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTCATGCTGTAT	5717	False	NA	-13	True	NA	NA	NA	181847471	181731116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.69	chr1	-	3844	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-67	847	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATTGGCTCATGCTGTA	5566	False	NA	-14	True	NA	NA	NA	181847622	181731117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731961_181732572_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.7	chr1	-	5506	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-177	1842	intron_retention	FALSE	non_canonical	0	0	junction_1	105.627377403507	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAAATGTAGCAGTCTG	5456	False	NA	-27	True	ATTAAA	-20	NA	181847732	181730122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731961_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.70	chr1	-	4157	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	244	847	intron_retention	FALSE	canonical	0	0	junction_13	109.20243402797	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATTGGCTCATGCTGTA	6206	False	NA	-14	True	NA	NA	NA	181846982	181731117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181846753
ES.2098.71	chr1	-	4475	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	-23	-847	-23	847	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACATTGGCTCATGCTGTA	5610	False	NA	-14	True	NA	NA	NA	181847578	181731117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.74	chr1	-	5338	2	FSM	ENSMUSG00000022995.17	ENSMUST00000191649.2	872	2	-2571	-1895	-1005	817	multi-exon	FALSE	canonical	3	407	junction_1	0	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	NA	False	NA	1	True	ACTAAA	-40	NA	181736974	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951
ES.2098.75	chr1	-	4215	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	31	817	intron_retention	FALSE	non_canonical	0	0	junction_9	107.693021975653	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	5674	False	NA	1	True	ACTAAA	-40	NA	181847514	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749325_181751218_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.76	chr1	-	4289	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	1	817	intron_retention	FALSE	non_canonical	0	0	junction_13	128.29607419193	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	5644	False	NA	1	True	ACTAAA	-40	NA	181847544	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731963_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789324_181789485_181847094
ES.2098.8	chr1	-	4396	10	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	16	1839	intron_retention	FALSE	non_canonical	0	0	junction_9	124.953719827644	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTTAAATGTAGCAGT	5659	False	NA	-30	True	ATTAAA	-17	NA	181847529	181730125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749491_181847500
ES.2098.80	chr1	-	3015	2	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1375	817	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	NA	False	NA	1	True	ACTAAA	-40	NA	181737344	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731953_181735134
ES.2098.81	chr1	-	4024	15	NNC	ENSMUSG00000022995.17	novel	3385	15	NA	NA	-11235	817	intron_retention	FALSE	non_canonical	0	0	junction_1	135.015343043459	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	6872	False	NA	1	True	ACTAAA	-40	NA	181858790	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731959_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181858607
ES.2098.84	chr1	-	4299	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	28	817	intron_retention	FALSE	canonical	0	0	junction_7	108.152423669385	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	5671	False	NA	1	True	ACTAAA	-40	NA	181847517	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746127_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.86	chr1	-	4284	13	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-2	817	intron_retention	FALSE	canonical	0	0	junction_3	111.332335324868	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGACAAAAAAAGAAA	5641	False	NA	1	True	ACTAAA	-40	NA	181847547	181731147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.88	chr1	-	4286	14	NNC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	-1	775	intron_retention	FALSE	canonical	0	0	junction_3	109.318058296983	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTTGTGCCTTGGTC	5642	False	NA	-41	True	NA	NA	NA	181847546	181731189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740893_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.89	chr1	-	4957	15	NNC	ENSMUSG00000022995.17	novel	4231	15	NA	NA	27	775	intron_retention	FALSE	non_canonical	0	0	junction_1	134.047680368759	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTTGTGCCTTGGTC	5670	False	NA	-41	True	NA	NA	NA	181847518	181731189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_181731961_181732015_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.90	chr1	-	4099	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-315	7445	4	571	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTTGAACGTTTGAT	5647	False	NA	NA	False	NA	NA	NA	181847541	181731393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.91	chr1	-	2902	7	NIC	ENSMUSG00000022995.17	novel	11229	14	NA	NA	56	461	intron_retention	FALSE	canonical	0	0	junction_4	150.90698017874	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAATTCTGTGGCTTTC	5699	False	NA	NA	False	ATTAAA	-22	NA	181847489	181731503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181783958_181784137_181789318_181789485_181847094
ES.2098.92	chr1	-	4378	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-704	7555	-375	461	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAATTCTGTGGCTTTC	5258	False	NA	NA	False	ATTAAA	-22	NA	181847930	181731503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.93	chr1	-	4042	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	23	-460	13	460	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCAATTCTGTGGCTTT	5656	False	NA	NA	False	ATTAAA	-21	NA	181847532	181731504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.94	chr1	-	3804	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-320	7745	-1	271	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGATTTGCTTTCTA	5642	False	NA	NA	False	NA	NA	NA	181847546	181731693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.95	chr1	-	3744	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	29	-168	19	168	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGCTGTCCATCATGAT	5662	False	NA	NA	False	NA	NA	NA	181847526	181731796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.96	chr1	-	3391	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-578	8416	-249	-355	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCATGTCTTCAGCTAT	5384	False	NA	NA	False	AGTAAA	-31	NA	181847804	181732364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.97	chr1	-	3311	14	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	1	-367	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAATCTTTTACATCAT	5644	False	NA	NA	False	AGTAAA	-19	NA	181847544	181732376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.98	chr1	-	3184	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	8	413	-2	-368	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTAATCTTTTACATCA	5641	False	NA	NA	False	AGTAAA	-18	NA	181847547	181732377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.2098.99	chr1	-	2936	13	NIC	ENSMUSG00000022995.17	novel	2832	14	NA	NA	61	-379	intron_retention	FALSE	canonical	1	1	junction_8	111.175130862177	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACCAAGTACTTAAT	5704	False	NA	NA	False	AGTAAA	-7	NA	181847484	181732388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ES.20980.1	chr2	+	3525	7	NIC	ENSMUSG00000027522.16	novel	647	7	NA	NA	-38	-6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	43.0790616837874	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATCCAGCATTCCTA	NA	False	NA	119	True	AATAAA	-17	NA	173918062	173941557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173918176_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.10	chr2	+	3387	7	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	0	-114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0790616837874	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAAAATGACTTTTTTT	NA	False	NA	11	True	AATAAA	-20	NA	173918110	173941449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918194_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.11	chr2	+	3043	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	-1362	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	192	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTTAAGTGTGTTATA	NA	False	NA	11	True	TTTAAA	-8	NA	173918110	173940201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.12	chr2	+	3599	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.2464687856557	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918110	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918166_173918916_173918988_173932413_173932522_173933280_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.13	chr2	+	4405	8	NNC	ENSMUSG00000027522.16	novel	3731	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATTCCTAGTATTA	NA	False	NA	125	True	AATAAA	-23	NA	173918110	173941563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.15	chr2	+	3534	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.2934318186642	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTCAGATAAGACTTT	NA	False	NA	-49	True	AATAAA	-13	NA	173918111	173941389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918176_173918916_173918988_173932413_173932522_173933274_173933416_173934205_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.16	chr2	+	2622	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	1011	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGATTTATCGACTCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	173918111	173939771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.17	chr2	+	4355	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-105	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918111	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.18	chr2	+	3646	8	NIC	ENSMUSG00000027522.16	novel	647	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCAGCATTCCTAGTAT	NA	False	NA	123	True	AATAAA	-21	NA	173918111	173941561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173918176_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.19	chr2	+	2447	7	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	1012	intron_retention	FALSE	canonical	2	9	junction_3	36.6397628570686	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTATCGACTCTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	173918111	173939772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.2	chr2	+	3570	8	NIC	ENSMUSG00000027522.16	novel	647	7	NA	NA	-16	-105	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918084	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173918176_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.20	chr2	+	3702	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.2914399703119	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATCCAGCATTCCTA	NA	False	NA	119	True	AATAAA	-17	NA	173918111	173941557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918166_173918916_173918987_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.21	chr2	+	4546	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-105	intron_retention	FALSE	canonical	1	1	junction_1	37.1262626047923	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918111	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173926203_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.22	chr2	+	4143	7	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-105	intron_retention	FALSE	non_canonical	0	0	junction_1	43.0790616837874	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918111	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.23	chr2	+	3469	7	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	1	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0790616837874	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918111	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918268_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.24	chr2	+	3795	10	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-175	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	39.6291450299205	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGGTCAGATAAGACTT	NA	False	NA	-50	True	AATAAA	-12	NA	173918111	173941388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918166_173918916_173918983_173926184_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.26	chr2	+	3717	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.2914399703119	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCAGCATTCCTAGTAT	NA	False	NA	123	True	AATAAA	-21	NA	173918111	173941561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918176_173918916_173918988_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.27	chr2	+	3553	8	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	1	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGACTTTTTTTTTG	NA	False	NA	14	True	AATAAA	-23	NA	173918111	173941452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918176_173932397_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.28	chr2	+	4280	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	7	-114	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAAAATGACTTTTTTT	NA	False	NA	11	True	AATAAA	-20	NA	173918121	173941449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.3	chr2	+	1892	8	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	-8	1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.4566426704102	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTTATCGACTCTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	173918092	173939772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918176_173932397_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.30	chr2	+	4342	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	7	-112	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAATGACTTTTTTTTT	NA	False	NA	13	True	AATAAA	-22	NA	173918121	173941451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918983_173932404_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.31	chr2	+	4392	8	NNC	ENSMUSG00000027522.16	novel	3731	9	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_1	40.9140462882061	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATTCCTAGTATTA	NA	False	NA	125	True	AATAAA	-23	NA	173918122	173941563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934205_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.33	chr2	+	4430	8	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	18	-4	intron_retention	FALSE	canonical	3	11	junction_1	29.7787761703546	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCCAGCATTCCTAGT	NA	False	NA	121	True	AATAAA	-19	NA	173918132	173941559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.34	chr2	+	3554	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	22	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.9111318460365	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTTTTTTTTGTC	NA	False	NA	16	True	AATAAA	-25	NA	173918136	173941454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918176_173918916_173918987_173932413_173932522_173933304_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.35	chr2	+	4457	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_4	40.7631285975601	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918141	173941564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934194_173934392_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.36	chr2	+	2316	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-252	1010	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.4566426704102	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGATTTATCGACTCT	NA	False	NA	NA	False	AGTAAA	-13	NA	173918462	173939770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.37	chr2	+	3803	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-42	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.7076083183476	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGACTTTTTTTTTG	NA	False	NA	14	True	AATAAA	-23	NA	173918672	173941452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173930098_173930166_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.38	chr2	+	3578	7	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	8	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.0790616837874	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918722	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.39	chr2	+	3587	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	9	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.3952960045151	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCAGATAAGACTTTTT	NA	False	NA	-47	True	AATAAA	-15	NA	173918723	173941391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933307_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.4	chr2	+	3066	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-4	-1363	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGTTAAGTGTGTTAT	NA	False	NA	10	True	TTTAAA	-7	NA	173918096	173940200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.40	chr2	+	3584	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-21	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.4566426704102	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAATGACTTTTTTTTT	NA	False	NA	13	True	AATAAA	-22	NA	173918829	173941451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.41	chr2	+	3580	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	-21	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.9140462882061	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173918829	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934205_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.42	chr2	+	3535	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	48	-114	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	38.4707681233427	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAAAATGACTTTTTTT	NA	False	NA	11	True	AATAAA	-20	NA	173918906	173941449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934205_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.43	chr2	+	7531	8	ISM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	1993	1797	1849	1007	3prime_fragment	FALSE	canonical	1	17	junction_1	27.7922320669878	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGATTTATCGAC	NA	False	NA	NA	False	AGTAAA	-10	NA	173920707	173939767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.44	chr2	+	1985	1	Intergenic	novelGene_17356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTGCTGTGGATGTAA	NA	False	NA	NA	False	GATAAA	-42	NA	173921040	173923025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_173921000_173923000
ES.20980.45	chr2	+	3980	8	ISM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	7166	175	7022	-174	3prime_fragment	FALSE	canonical	1	17	junction_1	27.7922320669878	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTCAGATAAGACTTT	NA	False	NA	-49	True	AATAAA	-13	NA	173925880	173941389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.46	chr2	+	9659	5	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	8907	-105	intron_retention	FALSE	canonical	3	84	junction_1	11.3219918742243	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTGTCCTTT	NA	False	NA	20	True	AATAAA	-29	NA	173927765	173941458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.47	chr2	+	7198	6	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	10686	-8	intron_retention	FALSE	canonical	3	84	junction_2	10.1311401135312	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATCCAGCATTCC	NA	False	NA	117	True	AATAAA	-15	NA	173929544	173941555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.48	chr2	+	8190	4	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	11346	-1	intron_retention	FALSE	canonical	3	88	junction_2	11.3431330181157	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGCATTCCTAGTATT	NA	False	NA	124	True	AATAAA	-22	NA	173930204	173941562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.49	chr2	+	3233	6	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	11954	1017	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	35.3417600014487	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATCGACTCTTGCCACT	NA	False	NA	NA	False	AGTAAA	-20	NA	173930812	173939777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.5	chr2	+	4296	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	1	-112	intron_retention	FALSE	canonical	0	0	junction_2	37.3952960045151	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAATGACTTTTTTTTT	NA	False	NA	13	True	AATAAA	-22	NA	173918101	173941451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918932_173932413_173932522_173933280_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.50	chr2	+	5089	7	ISM	ENSMUSG00000027522.16	ENSMUST00000044638.13	3731	9	12052	6	12044	-6	3prime_fragment	FALSE	canonical	3	83	junction_1	10.0567832276971	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCATCCAGCATTCCTA	NA	False	NA	119	True	AATAAA	-17	NA	173930902	173941557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.51	chr2	+	4769	7	ISM	ENSMUSG00000027522.16	ENSMUST00000044638.13	3731	9	12260	118	12252	-118	3prime_fragment	FALSE	canonical	3	83	junction_1	10.0567832276971	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAATCCAAAATGACTTT	NA	False	NA	7	True	AATAAA	-16	NA	173931110	173941445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.6	chr2	+	3677	8	NNC	ENSMUSG00000027522.16	novel	647	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918101	173941564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918194_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.7	chr2	+	4415	8	NNC	ENSMUSG00000027522.16	novel	3731	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	33.4566426704102	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATTCCTAGTATTA	NA	False	NA	125	True	AATAAA	-23	NA	173918110	173941563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918936_173932407_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20980.9	chr2	+	2501	7	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	1009	intron_retention	FALSE	non_canonical	0	0	junction_1	43.0790616837874	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTGATTTATCGACTC	NA	False	NA	NA	False	AGTAAA	-12	NA	173918110	173939769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173918988_173932413_173932522_173933274_173933416_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ES.20981.1	chr2	+	2489	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	-391	369	-391	-1	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCGCTCACTTT	NA	False	NA	7	True	ATTAAA	-16	NA	173951750	173964494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ES.20981.11	chr2	+	2529	11	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	5	intron_retention	FALSE	canonical	0	0	junction_4	83.1446931559676	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCTCACTTTTTTTCT	NA	False	NA	13	True	ATTAAA	-22	NA	173952144	173964500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955928_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.12	chr2	+	2590	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	247	junction_4	17.3980274176325	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962918_173963271_173963383_173963883
ES.20981.13	chr2	+	2474	12	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	intron_retention	FALSE	canonical	1	1	junction_7	104.395623859392	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173961352_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.14	chr2	+	4837	9	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	237	junction_6	20.8326666559997	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.15	chr2	+	4898	9	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	237	junction_6	19.7800404448525	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952144	173964495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.17	chr2	+	2096	12	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.325539451364	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953071_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962753_173962918_173963271_173963383_173963883
ES.20981.18	chr2	+	4702	9	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	247	junction_3	17.7394334746068	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962918_173963271_173963383_173963883
ES.20981.19	chr2	+	2247	11	NNC	ENSMUSG00000039263.17	novel	2052	10	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	80.4601764850165	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952145	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952236_173952865_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.2	chr2	+	5358	9	NIC	ENSMUSG00000039263.17	novel	2052	10	NA	NA	-366	-3	intron_retention	FALSE	canonical	3	237	junction_6	16.1245154965971	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTCTCCGCTCACT	NA	False	NA	5	True	ATTAAA	-14	NA	173951775	173964492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173953056_173953406_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.21	chr2	+	2680	11	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	13	-2	intron_retention	FALSE	canonical	1	1	junction_7	109.363842288025	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952154	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173961352_173961453_173962019_173962918_173963271_173963383_173963883
ES.20981.22	chr2	+	2177	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	13	-3	intron_retention	FALSE	canonical	0	0	junction_1	83.285319501365	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTCTCCGCTCACT	NA	False	NA	5	True	ATTAAA	-14	NA	173952154	173964492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.23	chr2	+	1913	13	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	16	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.35020737802	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTAGGGCATAAAGGG	NA	False	NA	NA	False	NA	NA	NA	173952157	173964833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883_173964042_173964549
ES.20981.24	chr2	+	2147	12	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	23	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	102.988485274683	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAACCTTGTCTCCGCTC	NA	False	NA	2	True	ATTAAA	-11	NA	173952164	173964489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961297_173961453_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ES.20981.25	chr2	+	2358	12	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	24	-2	intron_retention	FALSE	canonical	1	1	junction_7	117.421047854884	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952165	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952964_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173961352_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.26	chr2	+	2258	11	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	24	-2	intron_retention	FALSE	canonical	1	3	junction_1	79.5751845740869	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952165	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952964_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.27	chr2	+	4432	11	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_2	82.2109481760185	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952165	173964495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953301_173953406_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ES.20981.28	chr2	+	4464	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	24	-3	intron_retention	FALSE	canonical	3	237	junction_7	20.2362588647088	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTCTCCGCTCACT	NA	False	NA	5	True	ATTAAA	-14	NA	173952165	173964492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.29	chr2	+	8407	4	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	25	-3	intron_retention	FALSE	canonical	3	237	junction_3	28.8905982400273	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTCTCCGCTCACT	NA	False	NA	5	True	ATTAAA	-14	NA	173952166	173964492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173957987_173961185_173962121_173962336
ES.20981.3	chr2	+	2566	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	-189	-2	intron_retention	FALSE	canonical	3	237	junction_8	19.4907670449369	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173951952	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.31	chr2	+	2536	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	30	-2	intron_retention	FALSE	canonical	2	5	junction_7	81.6081491028929	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952171	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.32	chr2	+	3921	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	30	0	intron_retention	FALSE	canonical	3	237	junction_7	20.2484567313166	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952171	173964495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.33	chr2	+	4640	9	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	41	-2	intron_retention	FALSE	canonical	0	0	junction_2	131.09061751323	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952182	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953301_173953406_173953578_173955689_173957987_173961297_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ES.20981.34	chr2	+	5012	8	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	44	-2	intron_retention	FALSE	canonical	3	247	junction_2	18.5505377005518	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952185	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962918_173963271_173963383_173963883
ES.20981.35	chr2	+	1953	12	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	44	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	76.1772617426721	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAACCTTGTCTCCGCT	NA	False	NA	1	True	ATTAAA	-10	NA	173952185	173964488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952964_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ES.20981.36	chr2	+	2312	11	NNC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	56	-2	intron_retention	FALSE	canonical	0	0	junction_10	82.728229764694	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952197	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963374_173963883
ES.20981.38	chr2	+	4844	5	NIC	ENSMUSG00000039263.17	novel	2052	10	NA	NA	1836	-2	intron_retention	FALSE	canonical	2	4	junction_1	129.074590838011	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173955201	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173957987_173961297_173961453_173962019_173962121_173962336_173962918_173963271
ES.20981.39	chr2	+	7333	3	NIC	ENSMUSG00000039263.17	novel	2052	10	NA	NA	2939	-3	intron_retention	FALSE	canonical	3	269	junction_2	7.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTGTCTCCGCTCACT	NA	False	NA	5	True	ATTAAA	-14	NA	173956304	173964492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173962918_173963271_173963383_173963883
ES.20981.6	chr2	+	2311	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	214	junction_8	23.8863978029338	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952143	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962461_173962740_173962918_173963271_173963383_173963883
ES.20981.7	chr2	+	5192	8	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_4	126.802111615714	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952143	173964495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173956272_173957843_173957987_173961297_173961453_173962019_173962918_173963271_173963383_173963883
ES.20981.8	chr2	+	2945	9	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	247	junction_4	17.8535710713571	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952143	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173963383_173963883
ES.20981.9	chr2	+	4616	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	214	junction_7	26.0772830516913	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTCCGCTCACTT	NA	False	NA	6	True	ATTAAA	-15	NA	173952144	173964493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_173952366_173952869_173953056_173953406_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ES.20982.1	chr2	-	2543	1	Intergenic	novelGene_17357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	174098671	174096128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174096100_174098700
ES.20983.1	chr2	+	1550	12	NIC	ENSMUSG00000027523.21	novel	2465	13	NA	NA	45	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	329.74282490831	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	6239	False	NA	-17	True	NA	NA	NA	174127093	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174127271_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.10	chr2	+	4564	1	Genic_Genomic	ENSMUSG00000027523.21	novel	NA	NA	NA	NA	-532	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAATTTATTTATTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	174139119	174143683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_174139100_174143700
ES.20983.11	chr2	+	1775	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	-5	-4	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACGGTGTTGCTCTTT	NA	False	NA	11	True	AATAAA	-15	NA	174169357	174188533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.12	chr2	+	4161	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	-2413	-32	-23	0	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174169468	174188537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.13	chr2	+	1525	13	FSM	ENSMUSG00000027523.21	ENSMUST00000156623.8	1427	13	57	-155	-1	20	multi-exon	FALSE	canonical	0	0	junction_1	317.325892769913	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAAATGAAA	NA	False	NA	-72	True	NA	NA	NA	174169548	174188450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174169735_174169900_174169925_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.14	chr2	+	2520	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	-735	4	-735	-4	multi-exon	FALSE	non_canonical	0	0	junction_2	262.324150622851	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACGGTGTTGCTCTTT	NA	False	NA	11	True	AATAAA	-15	NA	174171063	174188533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.15	chr2	+	2451	12	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	-644	5	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	251.140045221883	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAATAAAAATTAAAAATG	NA	False	NA	-12	True	ATTAAA	-3	NA	174171154	174188510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.17	chr2	+	1118	5	NNC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	380.268572853451	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174171811	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174172173_174187268_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.2	chr2	+	1524	11	NIC	ENSMUSG00000027523.21	novel	2465	13	NA	NA	-48	-4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	345.827471436264	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACGGTGTTGCTCTTT	6248	False	NA	11	True	AATAAA	-15	NA	174127102	174188533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174127271_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.21	chr2	+	4226	11	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	693	junction_2	84.521535717236	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174171865	174188537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174172228_174176004_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.22	chr2	+	1831	11	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	-13	0	intron_retention	FALSE	canonical	3	678	junction_2	93.9223083191634	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174171868	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.28	chr2	+	1171	9	NNC	ENSMUSG00000027523.21	novel	3729	12	NA	NA	3940	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	273.010874325548	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174176019	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174187051_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20983.29	chr2	+	2135	3	NIC	ENSMUSG00000027523.21	novel	3729	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	890	junction_1	12.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174186100	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174187356_174187441_174187851_174188034
ES.20983.3	chr2	+	7687	1	FSM	ENSMUSG00002076469.1	ENSMUST00020182820.1	64	1	-116	-7507	-116	7507	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTACCTCAGCACCAGC	7430	False	NA	NA	False	NA	NA	NA	174128284	174135971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174128300_174136000
ES.20983.30	chr2	+	1280	1	NIC	ENSMUSG00000027523.21	novel	2465	13	NA	NA	783	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174187225	174188505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174187200_174188500
ES.20983.4	chr2	+	7549	2	NNC	ENSMUSG00000027523.21	novel	2059	4	NA	NA	1135	-2741	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	7431	False	NA	NA	False	NA	NA	NA	174128285	174135947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174135785_174135897
ES.20983.5	chr2	+	3677	2	NNC	ENSMUSG00000027523.21	novel	2059	4	NA	NA	1135	-2717	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTACCTCAGCACCAGC	7431	False	NA	NA	False	NA	NA	NA	174128285	174135971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174131885_174135893
ES.20983.6	chr2	+	7568	2	NNC	ENSMUSG00000027523.21	novel	2059	4	NA	NA	1136	-2717	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTACCTCAGCACCAGC	7432	False	NA	NA	False	NA	NA	NA	174128286	174135971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174135771_174135887
ES.20983.8	chr2	+	4592	2	Intergenic	novelGene_17358	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	174131234	174135947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174135771_174135891
ES.20983.9	chr2	+	4300	12	FSM	ENSMUSG00000027523.21	ENSMUST00000185956.7	3729	12	-539	-32	-539	0	multi-exon	FALSE	canonical	1	1	junction_1	251.174497310482	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174139112	174188537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174142011_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ES.20984.1	chr2	-	4616	5	NNC	ENSMUSG00000086537.8	novel	2248	5	NA	NA	-18	14807	intron_retention	FALSE	canonical	1	2	junction_1	1.6583123951777	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTTGGTGTTGTTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	174137200	174108222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174108535_174109798_174109963_174122914_174126459_174127932_174128191_174136862
ES.20984.4	chr2	-	3680	7	NNC	ENSMUSG00000086537.8	novel	1262	5	NA	NA	-20	14801	intron_retention	FALSE	canonical	0	0	junction_1	2.3094010767585	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATTGTTTGGTGTT	NA	False	NA	NA	False	AATAAA	-7	NA	174137202	174108228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174108535_174109838_174109963_174122914_174125218_174125458_174125602_174126252_174126459_174127932_174128191_174136862
ES.20984.5	chr2	-	5519	2	NIC	ENSMUSG00000086537.8	novel	2248	5	NA	NA	10	1	intron_retention	FALSE	canonical	3	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTGAGTCACTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	174137219	174123028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174128191_174136862
ES.20985.1	chr2	-	3705	4	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	9.56846672960488	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACTTCTCATTGCCT	527	False	NA	NA	False	ACTAAA	-27	NA	174169178	174162348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174163245_174163446_174165759_174167686_174167944_174168938
ES.20985.2	chr2	-	4936	2	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCCCTCTAGATTG	517	False	NA	NA	False	NA	NA	NA	174169188	174163257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174167944_174168938
ES.20985.3	chr2	-	1519	4	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	3.2659863237109	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTTTCA	526	False	NA	NA	False	NA	NA	NA	174169179	174163271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174163991_174165456_174165759_174167686_174167944_174168938
ES.20985.4	chr2	-	2981	3	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_2	2	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTTTCA	530	False	NA	NA	False	NA	NA	NA	174169175	174163271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174165759_174167686_174167944_174168938
ES.20986.1	chr2	+	158	1	Intergenic	novelGene_17359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	174237243	174237401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174237200_174237400
ES.20987.1	chr2	-	179	1	Intergenic	novelGene_17360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	174244802	174244623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174244600_174244800
ES.20988.1	chr2	+	3760	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	502	junction_8	50.6083985124999	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257592	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.10	chr2	+	4297	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-18	-6	intron_retention	FALSE	canonical	3	502	junction_8	52.9377936827745	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGATATTTTACTCA	NA	False	NA	34	True	AATAAA	-15	NA	174257625	174269289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174264468_174264844_174264998_174265168_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.11	chr2	+	2897	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-17	1	intron_retention	FALSE	canonical	3	502	junction_10	48.356890810813	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257626	174269296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.12	chr2	+	3549	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-17	-6	intron_retention	FALSE	canonical	3	502	junction_9	50.4857397425785	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGATATTTTACTCA	NA	False	NA	34	True	AATAAA	-15	NA	174257626	174269289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.15	chr2	+	3266	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	502	junction_9	48.7159077655491	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257626	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.16	chr2	+	3796	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	39	junction_1	171.463815424713	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257631	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257828_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.17	chr2	+	3727	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-11	-5	intron_retention	FALSE	canonical	3	502	junction_9	56.806326035803	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257632	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.18	chr2	+	2321	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-11	2	intron_retention	FALSE	canonical	3	511	junction_7	48.5259645011743	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTACTCATTTCTTAA	NA	False	NA	42	True	AATAAA	-23	NA	174257632	174269297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.19	chr2	+	3955	12	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-10	2484	intron_retention	FALSE	non_canonical	0	0	junction_11	177.050630102902	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTCAACCAACGGTGC	NA	False	NA	NA	False	NA	NA	NA	174257633	174271779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823_174269294_174271743
ES.20988.2	chr2	+	2279	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	9	-9	9	9	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTTCTTAAGCAGTCT	NA	False	NA	49	True	AATAAA	-30	NA	174257605	174269304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.20	chr2	+	2960	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	543	junction_4	42.5650692935762	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257635	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.21	chr2	+	4002	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	502	junction_8	52.6520654865505	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATTTTACTCATTTCT	NA	False	NA	39	True	AATAAA	-20	NA	174257635	174269294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174266534_174266906_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.22	chr2	+	3338	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	502	junction_9	50.2112891063256	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257636	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.23	chr2	+	4367	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	502	junction_7	53.3439804187275	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCAGATATTTTACT	NA	False	NA	32	True	AATAAA	-13	NA	174257636	174269287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.24	chr2	+	3074	13	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_4	170.188845273583	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257642	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263810_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.25	chr2	+	3540	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-1	1	intron_retention	FALSE	canonical	3	502	junction_9	52.4262567488297	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257642	174269296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.26	chr2	+	2324	14	ISM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	48	-9	1	9	intron_retention	FALSE	canonical	3	502	junction_12	50.2816917049343	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTTCTTAAGCAGTCT	NA	False	NA	49	True	AATAAA	-30	NA	174257644	174269304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609
ES.20988.27	chr2	+	3364	8	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	-5	intron_retention	FALSE	canonical	3	13	junction_1	205.641058395349	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257644	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.28	chr2	+	2599	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	-5	intron_retention	FALSE	canonical	3	502	junction_11	52.4353645512387	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257644	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.29	chr2	+	2265	16	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	2484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	152.495158393089	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTCAACCAACGGTGC	NA	False	NA	NA	False	NA	NA	NA	174257644	174271779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823_174269294_174271743
ES.20988.3	chr2	+	2158	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	20	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	160.114603926477	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257616	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268281_174268423_174268609_174268740_174268823
ES.20988.30	chr2	+	4058	13	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	-3	intron_retention	TRUE	non_canonical	0	0	junction_3	169.765585931503	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257644	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262521_174262613_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.31	chr2	+	2211	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.9727428305	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATTTTACTCATTTCT	NA	False	NA	39	True	AATAAA	-20	NA	174257644	174269294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257731_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.32	chr2	+	2309	15	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	145.444936631829	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257644	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257828_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.33	chr2	+	5502	8	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	267.268037897599	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257644	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174262525_174262613_174264468_174264844_174266862_174268127_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.34	chr2	+	4073	10	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_4	283.236759140467	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257645	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257828_174261819_174261939_174262116_174262227_174263502_174263810_174264359_174264468_174264844_174267047_174267685_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.35	chr2	+	4441	9	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	543	junction_4	44.7157690306227	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257646	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.36	chr2	+	6368	8	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_3	220.423432955569	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAGATATTTTACTC	NA	False	NA	33	True	AATAAA	-14	NA	174257646	174269288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262525_174262613_174264468_174264844_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.37	chr2	+	2409	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_1	207.056238047265	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATATTTTACTCATTTC	NA	False	NA	38	True	AATAAA	-19	NA	174257646	174269293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174259475_174259582_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.38	chr2	+	4503	11	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	3	-2	intron_retention	TRUE	non_canonical	0	0	junction_3	185.548080022403	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATATTTTACTCATTTC	NA	False	NA	38	True	AATAAA	-19	NA	174257646	174269293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262525_174262620_174263613_174264359_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.39	chr2	+	3977	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	-5	intron_retention	FALSE	canonical	3	543	junction_4	43.5697255861719	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257648	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.4	chr2	+	2122	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	158.919241892815	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257622	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.40	chr2	+	2741	14	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_9	162.931030531508	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATTTTACTCATTTCT	NA	False	NA	39	True	AATAAA	-20	NA	174257648	174269294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265942_174266398_174266534_174266906_174267086_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.42	chr2	+	3323	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	543	junction_4	41.4241475470528	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257648	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.43	chr2	+	2398	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	502	junction_11	50.824794769026	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257648	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.44	chr2	+	3602	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	-7	intron_retention	FALSE	canonical	3	523	junction_6	47.0450847591967	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAGATATTTTACTC	NA	False	NA	33	True	AATAAA	-14	NA	174257648	174269288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.45	chr2	+	1969	14	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	5	2484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	277.947847477112	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTCAACCAACGGTGC	NA	False	NA	NA	False	NA	NA	NA	174257648	174271779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263499_174263613_174264359_174264468_174264844_174264998_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268424_174268609_174268740_174268823_174269295_174271743
ES.20988.46	chr2	+	3331	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	6	1	intron_retention	FALSE	canonical	3	502	junction_9	48.6769966205804	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	False	NA	41	True	AATAAA	-22	NA	174257649	174269296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609
ES.20988.47	chr2	+	2242	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.9727428305	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257651	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261801_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.48	chr2	+	4189	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	502	junction_8	54.958256886477	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257651	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.5	chr2	+	2143	14	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.999986109953	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257623	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263510_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268281_174268423_174268609_174268740_174268823
ES.20988.50	chr2	+	3891	11	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	8	-6	intron_retention	FALSE	canonical	3	27	junction_1	174.285398126177	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGATATTTTACTCA	NA	False	NA	34	True	AATAAA	-15	NA	174257651	174269289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261825_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.51	chr2	+	3051	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	8	-3	intron_retention	FALSE	canonical	3	502	junction_10	54.4999362894633	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257651	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.52	chr2	+	2860	13	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	10	-3	intron_retention	FALSE	canonical	3	27	junction_1	160.067412014091	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATTTTACTCATTT	NA	False	NA	37	True	AATAAA	-18	NA	174257653	174269292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261825_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.53	chr2	+	2256	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	152.278695228217	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257654	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257785_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.54	chr2	+	5170	11	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	11	-5	intron_retention	FALSE	canonical	0	0	junction_3	185.953112369758	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174257654	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262525_174262613_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.55	chr2	+	3222	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	11	0	intron_retention	FALSE	canonical	3	502	junction_9	53.8686802394843	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257654	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265300_174265775_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.56	chr2	+	4238	13	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_3	169.647101032965	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257654	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262525_174262613_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.57	chr2	+	3893	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	11	-7	intron_retention	FALSE	canonical	3	502	junction_8	51.0929545045107	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAGATATTTTACTC	NA	False	NA	33	True	AATAAA	-14	NA	174257654	174269288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.58	chr2	+	1981	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	13	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	162.04035419885	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCAGATATTTTAC	NA	False	NA	31	True	AATAAA	-12	NA	174257656	174269286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.59	chr2	+	5821	10	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-12	-7	intron_retention	FALSE	canonical	0	0	junction_3	195.084470466729	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCAGATATTTTACTC	NA	False	NA	33	True	AATAAA	-14	NA	174257660	174269288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262525_174262613_174264468_174264844_174265942_174266398_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.6	chr2	+	3686	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-20	0	intron_retention	FALSE	canonical	3	18	junction_6	189.538621101054	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257623	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174267821_174268109_174268423_174268609_174268740_174268823
ES.20988.60	chr2	+	1924	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	167.494506543415	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257680	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268823
ES.20988.61	chr2	+	4350	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	2564	-6	intron_retention	FALSE	canonical	3	502	junction_9	46.8817749924881	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGATATTTTACTCA	NA	False	NA	34	True	AATAAA	-15	NA	174260236	174269289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.62	chr2	+	3888	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-3369	-5	intron_retention	FALSE	canonical	3	502	junction_7	51.5675273456389	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174261815	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174266534_174266906_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.63	chr2	+	2728	4	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	351	0	intron_retention	FALSE	canonical	3	593	junction_1	25.3113940087595	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174265535	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174267047_174267705_174267821_174268109_174268740_174268823
ES.20988.64	chr2	+	2941	4	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	437	-5	intron_retention	FALSE	canonical	3	558	junction_2	35.5183833465933	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	False	NA	35	True	AATAAA	-16	NA	174265621	174269290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174265942_174266398_174268423_174268609_174268740_174268823
ES.20988.7	chr2	+	2345	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	156.557090062953	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257623	174269295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265091_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ES.20988.8	chr2	+	3808	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	-20	3	intron_retention	FALSE	canonical	3	543	junction_4	42.3559286447367	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTCATTTCTTAAG	NA	False	NA	43	True	AATAAA	-24	NA	174257623	174269298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
ES.20989.1	chr2	+	637	2	Antisense	novelGene_ENSMUSG00000082641.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAGAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	174277901	174294331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_174278465_174294257
ES.2099.1	chr1	-	226	1	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCCCAAATACACTTGAC	6340	False	NA	NA	False	NA	NA	NA	181930886	181930660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_181930700_181930900
ES.20990.1	chr2	-	1422	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	17	2	17	-2	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGTGTACTTTATTTA	5346	False	NA	-2	True	AGTAAA	-15	NA	174280815	174269287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ES.20990.2	chr2	-	5216	4	NNC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	5333	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	248.668900794253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGTGTACTTTATTTA	9675	False	NA	-2	True	AGTAAA	-15	NA	174275499	174269287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174269776_174270370_174270537_174270848_174272721_174272809
ES.20990.3	chr2	-	2352	2	ISM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	8597	3	8597	-3	intron_retention	FALSE	canonical	3	526	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTTGTGTACTTTATTT	3771	False	NA	-3	True	AGTAAA	-14	NA	174272235	174269288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_174269776_174270370
ES.20990.4	chr2	-	1317	6	NNC	ENSMUSG00000016256.11	novel	1441	6	NA	NA	65	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	207.927872109537	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCTTGTGTACTTTATT	5394	False	NA	-4	True	AGTAAA	-13	NA	174280767	174269289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280087_174280562
ES.20991.1	chr2	+	2886	3	ISM	ENSMUSG00000016255.6	ENSMUST00000016399.6	1406	4	4862	-1487	4862	1487	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATTTTATCTCAGACT	9	True	NA	NA	False	AATAAA	-18	NA	174297349	174301162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174297559_174298382_174298494_174298596
ES.20992.1	chr2	-	3520	2	FSM	ENSMUSG00000016252.8	ENSMUST00000149191.2	1697	2	-21	-1802	19	1799	multi-exon	FALSE	canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTAAGGTCTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	174305863	174301065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174303015_174304292
ES.20992.10	chr2	-	5688	4	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	137	3	-10	-3	intron_retention	FALSE	canonical	3	812	junction_2	45.675181687895	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAAGAGCAGCTCTTCC	NA	False	NA	-7	True	AATAAA	-42	NA	174314737	174306862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090
ES.20992.11	chr2	-	4692	5	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	183	4	0	-4	intron_retention	FALSE	canonical	3	812	junction_2	46.932797700542	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGAAGAGCAGCTCTTC	NA	False	NA	-8	True	AATAAA	-41	NA	174314691	174306863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129
ES.20992.12	chr2	-	1450	6	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-37	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	349.827729032448	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTGAGACAGAAGAGCA	NA	False	NA	-15	True	AATAAA	-34	NA	174314764	174306870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311317_174314624
ES.20992.13	chr2	-	1555	7	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-30	-11	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	410.852366022963	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTGAGACAGAAGAGCA	NA	False	NA	-15	True	AATAAA	-34	NA	174314757	174306870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174312641_174312772_174314624
ES.20992.14	chr2	-	1195	7	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-14	-11	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	315.353593429485	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTGAGACAGAAGAGCA	NA	False	NA	-15	True	AATAAA	-34	NA	174314741	174306870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174307305_174307518_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ES.20992.16	chr2	-	3647	4	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-17	-12	intron_retention	FALSE	canonical	3	812	junction_2	60.9334792120792	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTGAGACAGAAGAGC	NA	False	NA	-16	True	AATAAA	-33	NA	174314744	174306871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174308518_174308622_174308732_174311299_174314624
ES.20992.17	chr2	-	1225	4	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-6	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	440.877155981875	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACACTGAGACAGAAGAG	NA	False	NA	-17	True	AATAAA	-32	NA	174314733	174306872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174310090_174310181_174311129_174311299_174314624
ES.20992.18	chr2	-	3786	3	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-60	-27	intron_retention	FALSE	canonical	3	918	junction_1	19	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCACTCTTAACAGAACA	NA	False	NA	-31	True	AATAAA	-18	NA	174314787	174306886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174308518_174311299_174314624
ES.20992.19	chr2	-	1378	6	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	0	-31	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	349.430622584799	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCATCACTCTTAACAG	NA	False	NA	-35	True	AATAAA	-14	NA	174314724	174306890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314618
ES.20992.2	chr2	-	447	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	-28	2	-28	1	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTTGTTTCTGTTC	NA	False	NA	-6	True	AATAAA	-20	NA	174305926	174302866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174303015_174304292_174304423_174305757
ES.20992.20	chr2	-	1339	6	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-14	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	355.9438157912	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTCATCACTCTTAA	NA	False	NA	-38	True	AATAAA	-11	NA	174314741	174306893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310168_174311163_174311299_174314624
ES.20992.21	chr2	-	7847	1	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-14	-35	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCTCATCACTCTTA	NA	False	NA	-39	True	AATAAA	-10	NA	174314741	174306894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174306900_174314700
ES.20992.22	chr2	-	1460	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	-7	100	-7	-100	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGATTTCGCATGCT	NA	False	NA	0	True	AGTAAA	-24	NA	174314881	174306959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ES.20992.23	chr2	-	6863	3	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	145	107	-2	-107	intron_retention	FALSE	canonical	3	812	junction_2	53	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTTTGTGATTTC	NA	False	NA	-7	True	AGTAAA	-17	NA	174314729	174306966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_174307730_174308518_174308622_174308732
ES.20992.24	chr2	-	4479	4	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	0	-107	intron_retention	FALSE	canonical	0	0	junction_1	413.032955370661	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTTTGTGATTTC	NA	False	NA	-7	True	AGTAAA	-17	NA	174314684	174306966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174308732_174308804_174310090_174310181_174311129
ES.20992.25	chr2	-	2227	5	NIC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	-15	-107	intron_retention	FALSE	canonical	3	812	junction_2	59.0762219509677	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTTTGTGATTTC	NA	False	NA	-7	True	AGTAAA	-17	NA	174314706	174306966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174311299_174314624
ES.20992.26	chr2	-	665	6	NNC	ENSMUSG00000016257.16	novel	355	3	NA	NA	-6	-440	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	354.952053100134	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAATTGCTCAAGGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	174314733	174307926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174308050_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ES.20992.3	chr2	-	385	3	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305884	174302867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174303015_174304292_174304404_174305757
ES.20992.4	chr2	-	3013	1	NIC	ENSMUSG00000016252.8	novel	421	3	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305880	174302867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174302900_174305900
ES.20992.5	chr2	-	1681	2	NIC	ENSMUSG00000016252.8	novel	421	3	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	2653	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGGTTTTGTTTCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	174305884	174302868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174304423_174305757
ES.20992.6	chr2	-	1732	2	FSM	ENSMUSG00000016252.8	ENSMUST00000149191.2	1697	2	-37	2	3	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGGTTTTGTTTCTG	NA	False	NA	-9	True	AATAAA	-17	NA	174305879	174302869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174303015_174304292
ES.20992.7	chr2	-	413	3	Fusion	ENSMUSG00000016257.16_ENSMUSG00000016252.8	novel	421	3	NA	NA	-35	-2	multi-exon	FALSE	canonical	0	0	junction_1	21	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGGTTTTGTTTCTG	NA	False	NA	-9	True	AATAAA	-17	NA	174314762	174302869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_174303015_174304292_174304423_174314624
ES.20992.8	chr2	-	1622	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	-45	-24	-45	24	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACTTCACATTGACTTA	NA	False	NA	20	True	NA	NA	NA	174314919	174306835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ES.20992.9	chr2	-	7103	2	ISM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	122	1	-25	-1	intron_retention	FALSE	canonical	3	918	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGCAGCTCTTCCCA	NA	False	NA	-5	True	AATAAA	-44	NA	174314752	174306860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_174307730_174308518
ES.20993.1	chr2	-	156	1	Intergenic	novelGene_17361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATTAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	174354475	174354319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174354300_174354500
ES.20994.1	chr2	+	192	1	Intergenic	novelGene_17362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	174661512	174661704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174661500_174661700
ES.20995.1	chr2	-	179	1	Intergenic	novelGene_17363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGGGCTGGGATATAT	NA	False	NA	NA	False	NA	NA	NA	174770776	174770597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174770600_174770800
ES.20996.1	chr2	+	5457	1	Intergenic	novelGene_17364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGACCCAACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	174803820	174809277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174803800_174809300
ES.20996.2	chr2	+	1850	1	Intergenic	novelGene_17365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACGATGGGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	174803903	174805753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174803900_174805800
ES.20996.3	chr2	+	1418	1	Intergenic	novelGene_17366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	13	True	NA	NA	NA	174804213	174805631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174804200_174805600
ES.20996.4	chr2	+	6664	2	Intergenic	novelGene_17367	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGCCGGGCAATGATGG	NA	False	NA	NA	False	CATAAA	-5	NA	174804398	174819760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174809798_174818495
ES.20996.5	chr2	+	4750	1	Intergenic	novelGene_17368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	174806051	174810801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174806100_174810800
ES.20996.6	chr2	+	2741	2	Intergenic	novelGene_17369	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGCAGACCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	174807539	174816359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174809798_174815876
ES.20997.1	chr2	+	195	1	Intergenic	novelGene_17370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCACACCTATCAACAG	NA	False	NA	NA	False	NA	NA	NA	174841959	174842154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174842000_174842200
ES.20998.1	chr2	+	3284	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5630	1859	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	489.250674217443	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCTGTTACAGCTA	NA	False	NA	14	True	NA	NA	NA	174846403	174862900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846551_174858430_174858558_174858749_174858811_174859951
ES.20998.10	chr2	+	3829	6	Fusion	ENSMUSG00000080888.4_ENSMUSG00000078906.10	novel	2055	3	NA	NA	-5504	1477	multi-exon	FALSE	non_canonical	0	0	junction_1	479.512669279968	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	174846529	174933188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174846640_174858430_174858558_174858749_174858811_174928293_174928421_174928631_174928693_174929845
ES.20998.100	chr2	+	1964	1	Genic_Genomic	ENSMUSG00000078896.12	novel	NA	NA	NA	NA	11712	1567	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	175323567	175325531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_175323600_175325500
ES.20998.101	chr2	+	4486	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3656	2788	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	108.699126031445	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175432114	175448441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175432264_175435718_175435774_175442797_175442925_175443129_175443191_175444347
ES.20998.102	chr2	+	4562	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3628	2920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	116.192458877502	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATCAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-37	NA	175432142	175448573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175432236_175435718_175435774_175442797_175442925_175443129_175443191_175444347
ES.20998.103	chr2	+	1475	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3596	1037	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	109.728072980437	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAGATTGCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	175432174	175444231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175432264_175435718_175435774_175437078_175437181_175442797_175442925_175443129
ES.20998.104	chr2	+	1425	4	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3594	1091	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	113.620225116638	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	175432176	175444285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175432264_175435718_175435774_175442797_175442925_175443129
ES.20998.105	chr2	+	1769	2	ISM	ENSMUSG00000094475.8	ENSMUST00000185834.3	1494	3	-1428	2310	-1428	149	5prime_fragment	FALSE	canonical	3	281	junction_1	0	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAACTGTTGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	175441369	175443343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_175442925_175443129
ES.20998.106	chr2	+	4541	5	Fusion	ENSMUSG00000078887.11_ENSMUSG00000094475.8	novel	1497	4	NA	NA	2362	2787	multi-exon	TRUE	non_canonical	0	0	junction_1	0	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175445159	175675828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175445260_175542398_175542586_175542837_175542996_175638983_175638992_175671740
ES.20998.107	chr2	+	4581	6	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3657	2788	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	100.95147349098	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175529672	175546000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175534637_175534740_175540356_175540484_175540688_175540750_175541906
ES.20998.108	chr2	+	1349	5	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3657	858	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	107.592692595733	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	175529672	175541611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175534637_175534740_175540356_175540484_175540688
ES.20998.109	chr2	+	1650	3	NNC	ENSMUSG00000094932.8	novel	195	3	NA	NA	-3655	-4661	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	23.5	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAGAAGCAAGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	175529674	175536092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175534637
ES.20998.11	chr2	+	3195	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5496	1837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.5	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGACAAACAGA	NA	False	NA	-8	True	NA	NA	NA	174846537	174862878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846745_174858749_174858811_174859951
ES.20998.110	chr2	+	4550	5	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3654	2862	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	106.376689175778	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGGTTAGACAATA	NA	False	NA	NA	False	NA	NA	NA	175529675	175546074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688_175540750_175541906
ES.20998.111	chr2	+	5624	4	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3645	2788	intron_retention	FALSE	canonical	3	24	junction_2	111.283421945948	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175529684	175546000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688
ES.20998.112	chr2	+	4522	6	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3626	2788	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	105.590529878394	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175529703	175546000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529787_175533277_175533333_175534637_175534740_175540356_175540484_175540688_175540750_175541906
ES.20998.113	chr2	+	4160	6	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3626	2398	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	100.95147349098	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGATGTGTTTGCGTG	NA	False	NA	NA	False	NA	NA	NA	175529703	175545610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175534637_175534740_175540356_175540484_175540688_175540750_175541906
ES.20998.114	chr2	+	495	4	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3616	147	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	111.283421945948	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTAACTGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	175529713	175540900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688
ES.20998.115	chr2	+	4645	5	Fusion	ENSMUSG00000094932.8_ENSMUSG00000078887.11	novel	1497	4	NA	NA	1837	2785	multi-exon	TRUE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175542193	175675826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175542206_175542624_175542854_175543021_175543103_175638838_175639046_175671710
ES.20998.116	chr2	+	4252	3	Fusion	ENSMUSG00000094932.8_ENSMUSG00000078887.11	novel	1494	3	NA	NA	2315	2787	multi-exon	TRUE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175542671	175675828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175542683_175542850_175543006_175671742
ES.20998.117	chr2	+	3432	3	Fusion	ENSMUSG00000094932.8_ENSMUSG00000078887.11	novel	1494	3	NA	NA	2547	2787	multi-exon	FALSE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175542903	175675828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175543006_175671742_175671911_175672666
ES.20998.118	chr2	+	3762	1	Intergenic	novelGene_17386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGACAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	175651358	175655120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_175651400_175655100
ES.20998.119	chr2	+	1349	5	NNC	ENSMUSG00000078887.11	novel	599	6	NA	NA	-12	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.3071811327407	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	175661025	175671272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175661175_175664841_175664897_175666200_175666303_175670028_175670149_175670349
ES.20998.12	chr2	+	1527	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5483	655	intron_retention	FALSE	non_canonical	0	0	junction_1	600.5	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174846550	174860060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174858430_174858558_174858749
ES.20998.120	chr2	+	527	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	21	897	-5	-897	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGCAGATATGTAAC	NA	False	NA	NA	False	NA	NA	NA	175661032	175670552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ES.20998.121	chr2	+	870	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	48	527	-19	-527	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGGAATTTTCACTTG	NA	False	NA	NA	False	NA	NA	NA	175661059	175670922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ES.20998.122	chr2	+	1446	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	51	-52	-16	52	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGACTCATCAGT	NA	False	NA	NA	False	NA	NA	NA	175661062	175671501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ES.20998.123	chr2	+	1295	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	60	90	-7	-90	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	175661071	175671359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ES.20998.124	chr2	+	4212	5	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	-1	2398	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	79.6649232724164	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	175661077	175675439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567
ES.20998.125	chr2	+	4301	6	FSM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	41	-3743	0	2386	multi-exon	FALSE	canonical	3	14	junction_2	84.5846321739357	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAGCATTACTAGTGAT	NA	False	NA	NA	False	NA	NA	NA	175661078	175675427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349_175670411_175671567
ES.20998.126	chr2	+	2495	1	NIC	ENSMUSG00000078887.11	novel	1445	4	NA	NA	0	-1742	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTAGCAAAAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	175661078	175663573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175661100_175663600
ES.20998.127	chr2	+	6533	3	NIC	ENSMUSG00000078887.11	novel	1445	4	NA	NA	8	38	intron_retention	FALSE	canonical	3	82	junction_1	81.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATACAGATAA	NA	False	NA	NA	False	NA	NA	NA	175661086	175671487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175661175_175664841_175670149_175670349
ES.20998.128	chr2	+	6403	3	NIC	ENSMUSG00000078887.11	novel	1445	4	NA	NA	8	-92	intron_retention	FALSE	canonical	3	82	junction_1	81.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTGTTCCCATTTCA	NA	False	NA	NA	False	NA	NA	NA	175661086	175671357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175661175_175664841_175670149_175670349
ES.20998.129	chr2	+	10594	6	Fusion	ENSMUSG00000078887.11_ENSMUSG00000078891.5_ENSMUSG00000078886.13	novel	599	6	NA	NA	10	2582	intron_retention	TRUE	non_canonical	0	0	junction_2	19.6	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175661088	175845081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175661175_175760682_175763243_175836620_175841084_175841167_175841474_175841557_175844101_175844445
ES.20998.13	chr2	+	421	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5483	635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	432.81231498191	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAACATACTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	174846550	174860040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174855220_174855276_174858430_174858558_174858749_174858811_174859951
ES.20998.130	chr2	+	2282	6	NNC	ENSMUSG00000078887.11	novel	599	6	NA	NA	19	1076	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	83.5353817253504	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTCAGATTTCCCA	NA	False	NA	NA	False	NA	NA	NA	175661097	175674117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349_175670411_175671567_175671911_175672498
ES.20998.131	chr2	+	6726	3	NIC	ENSMUSG00000078887.11	novel	599	6	NA	NA	-1670	5	intron_retention	FALSE	canonical	3	14	junction_1	115.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGATTGCTCTGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	175663223	175671454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175664897_175666200_175670149_175670349
ES.20998.132	chr2	+	4253	2	NNC	ENSMUSG00000078887.11	novel	1665	4	NA	NA	6711	2900	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTTTTTTAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	175671604	175675941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175672791_175672874
ES.20998.133	chr2	+	3251	2	NNC	ENSMUSG00000078887.11	novel	1665	4	NA	NA	7431	2785	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175672324	175675826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175672717_175672967
ES.20998.134	chr2	+	1574	5	NNC	ENSMUSG00000078886.13	novel	532	5	NA	NA	-32	-181	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	111.71839597846	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGACTCATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	175757091	175769247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175757228_175760682_175760738_175762042_175762145_175767761_175767889_175768093
ES.20998.135	chr2	+	4052	5	NNC	ENSMUSG00000078886.13	novel	1497	4	NA	NA	-28	920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	113.526428641088	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	175757095	175773016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175757200_175760682_175760738_175767761_175767889_175768093_175768155_175769311
ES.20998.136	chr2	+	1202	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	7	412	7	-412	multi-exon	FALSE	canonical	3	28	junction_2	114.545478595476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	175757130	175769016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ES.20998.137	chr2	+	3814	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	64	-2257	16	-411	multi-exon	FALSE	canonical	3	28	junction_2	114.545478595476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTGAAACCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	175757187	175771685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ES.20998.138	chr2	+	1472	4	NNC	ENSMUSG00000078886.13	novel	1621	4	NA	NA	-139	-234	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	126.873515316984	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTAGATTGCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	175760595	175769194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175760738_175762042_175762145_175767761_175767889_175768093
ES.20998.139	chr2	+	224	1	Intergenic	novelGene_17388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	175776848	175777072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_175776800_175777100
ES.20998.14	chr2	+	4312	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-81743	2169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174846550	174933880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174928293_174928421_174928631_174928693_174929845
ES.20998.140	chr2	+	3198	1	Genic_Genomic	ENSMUSG00000078891.5	novel	NA	NA	NA	NA	2301	2580	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175841881	175845079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_175841900_175845100
ES.20998.15	chr2	+	4502	6	Fusion	ENSMUSG00000080888.4_ENSMUSG00000078906.10	novel	2055	3	NA	NA	-5483	2171	multi-exon	FALSE	non_canonical	0	0	junction_1	479.512669279968	493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174846550	174933882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174846640_174858430_174858558_174858749_174858811_174928293_174928421_174928631_174928693_174929845
ES.20998.16	chr2	+	3886	6	Fusion	ENSMUSG00000080888.4_ENSMUSG00000078906.10	novel	2055	3	NA	NA	-5483	1483	multi-exon	FALSE	non_canonical	0	0	junction_1	3.6	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	174846550	174933194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174846640_174858430_174858558_174899518_174899652_174928293_174928421_174928631_174928693_174929845
ES.20998.17	chr2	+	258	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5475	662	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.5	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	174846558	174860067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174858749_174858811_174859951
ES.20998.18	chr2	+	6553	10	Fusion	ENSMUSG00000080888.4_ENSMUSG00000078906.10	novel	2055	3	NA	NA	-5475	2171	multi-exon	FALSE	non_canonical	0	0	junction_1	391.163790644164	493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174846558	174933882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174846640_174858430_174858558_174858749_174858811_174859951_174860158_174860241_174860608_174860689_174861636_174899110_174899652_174928293_174928421_174928631_174928693_174929845
ES.20998.2	chr2	+	1427	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5538	500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.5	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	174846495	174859905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174858430_174858558_174858749
ES.20998.20	chr2	+	1495	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	-65	-511	-65	511	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTTCACGTGTGC	NA	False	NA	NA	False	NA	NA	NA	174851968	174859916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ES.20998.21	chr2	+	3273	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-133	-1859	-55	1859	multi-exon	FALSE	canonical	3	436	junction_1	343.521307765456	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCTGTTACAGCTA	NA	False	NA	14	True	NA	NA	NA	174851978	174862900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951
ES.20998.22	chr2	+	1360	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-120	1182	-42	454	5prime_fragment	FALSE	canonical	3	436	junction_1	382.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTTTAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	174851991	174859859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174852115_174858430_174858558_174858749
ES.20998.23	chr2	+	3242	4	NNC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-40	1837	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	226.461181368169	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGACAAACAGA	NA	False	NA	-8	True	NA	NA	NA	174851993	174862878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174858430_174858558_174858743_174858811_174859951
ES.20998.24	chr2	+	1241	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	-117	1298	-39	338	5prime_fragment	FALSE	canonical	3	436	junction_1	382.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	174851994	174859743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174852115_174858430_174858558_174858749
ES.20998.25	chr2	+	3118	3	NIC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-39	1847	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	222.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAACAGAAATATCTGTG	NA	False	NA	2	True	NA	NA	NA	174851994	174862888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174852115_174858749_174858811_174859951
ES.20998.26	chr2	+	5028	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-27	14473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	490.549373152183	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTTAGGTCGTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	174852006	174875514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174858430_174858558_174858749_174859480_174868274_174872012_174875188
ES.20998.27	chr2	+	409	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-18	655	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	446.070341986553	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174852015	174860060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174855220_174855276_174858472_174858558_174858749_174858811_174859951
ES.20998.28	chr2	+	3269	5	NIC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-18	1837	combination_of_known_junctions	FALSE	canonical	3	233	junction_1	354.600743795046	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGACAAACAGA	NA	False	NA	-8	True	NA	NA	NA	174852015	174862878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749_174858811_174859951
ES.20998.29	chr2	+	3879	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-13	511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	520.012179344548	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTTCACGTGTGC	NA	False	NA	NA	False	NA	NA	NA	174852020	174859916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174855220_174855304_174856022_174858558_174858749
ES.20998.30	chr2	+	3525	6	NNC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-8	3940	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_4	439.42935723504	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTCTGTCTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	174852025	174864981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951_174862719_174864043_174864177_174864633
ES.20998.31	chr2	+	1945	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-8	501	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	494.337491553651	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	174852025	174859906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174854703_174855276_174858430_174858558_174858749
ES.20998.32	chr2	+	1582	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	-8	-655	-8	655	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174852025	174860060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ES.20998.33	chr2	+	1265	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	-8	-338	-8	338	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	174852025	174859743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ES.20998.34	chr2	+	3069	4	NNC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	-8	655	intron_retention	FALSE	non_canonical	0	0	junction_2	210.564848812796	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174852025	174860060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174855220_174855304_174856022_174858811_174859951
ES.20998.35	chr2	+	433	5	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	0	655	combination_of_known_junctions	FALSE	canonical	3	233	junction_1	354.600743795046	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174852033	174860060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749_174858811_174859951
ES.20998.36	chr2	+	3593	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	0	660	intron_retention	FALSE	canonical	3	233	junction_1	406.495045753601	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	NA	False	NA	NA	False	NA	NA	NA	174852033	174860065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174852115_174855220_174858558_174858749_174858811_174859951
ES.20998.37	chr2	+	2742	4	Fusion	ENSMUSG00000082112.2_ENSMUSG00000078906.10	novel	919	4	NA	NA	0	-111	intron_retention	FALSE	canonical	0	0	junction_3	496.400599874291	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGATGTGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	174852033	174882718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174852115_174858430_174858558_174858749_174858811_174880245
ES.20998.38	chr2	+	1073	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	6	-160	6	160	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTAGAATTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	174852039	174859565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ES.20998.39	chr2	+	773	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	6	140	6	-140	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGTACCACATCTCT	NA	False	NA	NA	False	NA	NA	NA	174852039	174859265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ES.20998.4	chr2	+	3681	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-81798	1483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	174846495	174933194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174928293_174928421_174928631_174928693_174929845
ES.20998.40	chr2	+	1489	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	6	450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	512.897345967007	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATCAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	174852039	174859855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174852115_174854618_174854684_174855159_174855276_174858430_174858558_174858749
ES.20998.41	chr2	+	1672	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3007	-654	2929	654	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCATGACTGTAACC	NA	False	NA	NA	False	NA	NA	NA	174855040	174860059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174855276_174858430_174858558_174858749
ES.20998.42	chr2	+	503	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	2964	661	combination_of_known_junctions	FALSE	canonical	3	515	junction_3	284.818460700067	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTGTAACCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	174855075	174860066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174855276_174858430_174858558_174858749_174858811_174859951
ES.20998.43	chr2	+	4828	1	NIC	ENSMUSG00000078906.10	novel	1281	4	NA	NA	2966	500	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	174855077	174859905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174855100_174859900
ES.20998.44	chr2	+	1320	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3045	-340	2967	340	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATGTA	NA	False	NA	NA	False	NA	NA	NA	174855078	174859745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174855276_174858430_174858558_174858749
ES.20998.45	chr2	+	3333	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	2968	1859	combination_of_known_junctions	FALSE	canonical	3	515	junction_3	284.818460700067	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGCTGTTACAGCTA	NA	False	NA	14	True	NA	NA	NA	174855079	174862900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174855276_174858430_174858558_174858749_174858811_174859951
ES.20998.46	chr2	+	3172	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	2994	1847	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	482.317553300958	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAACAGAAATATCTGTG	NA	False	NA	2	True	NA	NA	NA	174855105	174862888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174855153_174858430_174858558_174858749_174858811_174859951
ES.20998.47	chr2	+	1271	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3003	450	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	588	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATCAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	174855114	174859855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174855153_174858430_174858558_174858749
ES.20998.48	chr2	+	3164	3	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3007	1856	combination_of_known_splicesites	FALSE	canonical	3	113	junction_1	201	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTGTGCTGTTACAG	NA	False	NA	11	True	NA	NA	NA	174855118	174862897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_174855276_174858749_174858811_174859951
ES.20998.49	chr2	+	3405	3	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3018	457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.5	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATTTTAAAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	174855129	174859862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174855276_174856411_174858558_174858749
ES.20998.5	chr2	+	1412	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5520	450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	495.211963596286	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATCAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	174846513	174859855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846638_174855220_174855276_174858430_174858558_174858749
ES.20998.50	chr2	+	842	3	ISM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	3098	85	3020	-85	3prime_fragment	FALSE	canonical	3	748	junction_1	226.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCACTTGTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	174855131	174859320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_174855276_174858430_174858558_174858749
ES.20998.51	chr2	+	5110	1	Genic_Genomic	ENSMUSG00000078906.10	novel	NA	NA	NA	NA	5650	1830	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATATTAAAAAAAAAAGAC	NA	False	NA	-15	True	NA	NA	NA	174857761	174862871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_174857800_174862900
ES.20998.52	chr2	+	7374	2	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	7235	14474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	174859346	174875515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174859480_174868274
ES.20998.53	chr2	+	177	1	Intergenic	novelGene_17371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACCT	NA	False	NA	NA	False	NA	NA	NA	174864645	174864822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174864600_174864800
ES.20998.54	chr2	+	179	1	Intergenic	novelGene_17372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATAAACA	NA	False	NA	NA	False	NA	NA	NA	174913981	174914160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174914000_174914200
ES.20998.55	chr2	+	4377	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8624	2171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174919669	174933882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919822_174928293_174928421_174928631_174928693_174929845
ES.20998.56	chr2	+	5776	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8623	200747	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	3.74165738677394	207	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	174919670	175132458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845_174933210_175130345
ES.20998.57	chr2	+	3895	3	NNC	ENSMUSG00000078891.5	novel	622	2	NA	NA	-919570	1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	561	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	174919672	175844392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_175839580_175839642_175840794
ES.20998.58	chr2	+	3852	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8621	1483	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	174919672	174933194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174920115_174928631_174928693_174929845
ES.20998.59	chr2	+	3686	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8621	1483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	174919672	174933194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919822_174928293_174928421_174928631_174928693_174929845
ES.20998.6	chr2	+	1566	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5516	466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	566.156829470029	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTCATACAGATAA	NA	False	NA	NA	False	NA	NA	NA	174846517	174859871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174854703_174854899_174858430_174858558_174858749
ES.20998.60	chr2	+	4330	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8617	2171	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174919676	174933882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845
ES.20998.61	chr2	+	6266	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8617	201426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	207	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174919676	175133137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919726_174928631_174928693_174929845_174933210_175130345
ES.20998.62	chr2	+	3755	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8607	1479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.02768199119819	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	174919686	174933190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928293_174928421_174928631_174928693_174929845
ES.20998.63	chr2	+	3775	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8606	1477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.24264068711928	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	174919687	174933188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928270_174928421_174928631_174928693_174929845
ES.20998.64	chr2	+	3843	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8606	1479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.85861230093008	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	174919687	174933190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174923397_174923614_174928631_174928693_174929845
ES.20998.65	chr2	+	6913	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8606	395951	intron_retention	TRUE	non_canonical	0	0	junction_2	1.4142135623731	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	174919687	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174933180_175130315_175132224_175327426
ES.20998.66	chr2	+	5759	5	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8605	395951	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	3.67423461417477	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	174919688	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845_174933210_175130345_175132308_175327510
ES.20998.67	chr2	+	3626	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8598	1486	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	174919695	174933197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845
ES.20998.68	chr2	+	3868	3	Fusion	ENSMUSG00000078891.5_ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8596	1891	multi-exon	FALSE	canonical	0	0	junction_2	1.5	561	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	174919697	175844390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174919909_174928631_174928693_175840794
ES.20998.69	chr2	+	3827	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8596	1473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAAGACTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	174919697	174933184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928909_174929845
ES.20998.7	chr2	+	474	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-589253	-1197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.363654119317	659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	174846517	175444456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_175435718_175435774_175442797_175442925_175443129_175443191_175444347
ES.20998.70	chr2	+	4518	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8591	2169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.85861230093008	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174919702	174933880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174923397_174923614_174928631_174928693_174929845
ES.20998.72	chr2	+	5720	5	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8566	395951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.67423461417477	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	174919727	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845_174933180_175130315_175132224_175327426
ES.20998.73	chr2	+	4986	3	Fusion	ENSMUSG00000078891.5_ENSMUSG00000078896.12	novel	622	2	NA	NA	-392043	1893	intron_retention	TRUE	non_canonical	0	0	junction_1	0	561	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	174919734	175844392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_174919909_175320124_175320164_175839619
ES.20998.74	chr2	+	6391	4	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8559	201426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.74165738677394	207	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174919734	175133137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845_174933180_175130315
ES.20998.75	chr2	+	3982	3	NNC	ENSMUSG00000078891.5	novel	622	2	NA	NA	-919452	1892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	561	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	174919790	175844391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174920115_175839580_175839642_175840794
ES.20998.76	chr2	+	5653	5	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-8500	395950	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	3.67423461417477	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	174919793	175327661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174919909_174928631_174928693_174929845_174933210_175130345_175132264_175327466
ES.20998.77	chr2	+	4731	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	-506	2171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.5	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174927787	174933882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174928421_174928631_174928693_174929845
ES.20998.78	chr2	+	5410	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	1620	395951	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	174929913	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174933210_175130345_175132252_175327454
ES.20998.79	chr2	+	3740	2	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	1706	2167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGTTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	174929999	174933878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174932242_174932380
ES.20998.8	chr2	+	429	4	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5512	669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	491.960025476325	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAATGTGGTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	174846521	174860074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174858430_174858558_174858749_174858811_174859951
ES.20998.80	chr2	+	3833	3	NNC	ENSMUSG00000080888.4	novel	2055	3	NA	NA	3203	395948	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	174931496	175327659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174931678_175128804_175132252_175327454
ES.20998.81	chr2	+	177	1	Intergenic	novelGene_17377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	174970566	174970743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_174970600_174970700
ES.20998.82	chr2	+	259	1	FSM	ENSMUSG00000084323.5	ENSMUST00000121572.2	624	1	432	-67	432	67	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCACAGCTTTAGATTA	NA	False	NA	NA	False	NA	NA	NA	175112780	175113039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175112800_175113000
ES.20998.83	chr2	+	1263	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	-69	2188	-69	923	multi-exon	FALSE	canonical	3	19	junction_2	45	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGAGCCAGATAATCA	NA	False	NA	NA	False	NA	NA	NA	175116848	175126410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175116997_175125090_175125218_175125422
ES.20998.84	chr2	+	7304	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	-60	-3862	-60	3862	multi-exon	FALSE	canonical	3	19	junction_2	45	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	175116857	175132460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175116997_175125090_175125218_175125422
ES.20998.85	chr2	+	6809	4	NNC	ENSMUSG00000078901.9	novel	3382	3	NA	NA	-39	4541	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	44.4322205412044	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175116878	175133139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175116997_175125090_175125218_175125422_175125484_175126636
ES.20998.86	chr2	+	6127	4	NNC	ENSMUSG00000078901.9	novel	3382	3	NA	NA	-39	3859	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	44.4322205412044	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	175116878	175132457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175116997_175125090_175125218_175125422_175125484_175126636
ES.20998.87	chr2	+	364	3	Fusion	ENSMUSG00000078901.9_ENSMUSG00000078898.10	novel	3382	3	NA	NA	-10	-859	multi-exon	FALSE	canonical	3	17	junction_2	20	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCACTGCTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	175116907	175222720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175116997_175222239_175222367_175222572
ES.20998.88	chr2	+	4061	2	NNC	ENSMUSG00000078901.9	novel	3382	3	NA	NA	3308	199064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	175128398	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175132353_175327555
ES.20998.89	chr2	+	2331	2	Antisense	novelGene_ENSMUSG00000095231.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	175130127	175327661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_175132267_175327469
ES.20998.9	chr2	+	1645	5	NNC	ENSMUSG00000078906.10	novel	919	4	NA	NA	-5504	502	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	510.300401724318	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGTGTAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	174846529	174859907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_174846640_174854703_174854899_174855220_174855276_174858430_174858558_174858749
ES.20998.90	chr2	+	6542	4	FSM	ENSMUSG00000078898.10	ENSMUST00000109047.3	1480	4	-29	-5033	1	4035	multi-exon	FALSE	canonical	3	11	junction_3	13.8884444373331	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	175214255	175230029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175214367_175222239_175222367_175222572_175222634_175223786
ES.20998.91	chr2	+	428	3	FSM	ENSMUSG00000078898.10	ENSMUST00000131676.8	1272	3	48	796	-8	-796	multi-exon	FALSE	canonical	3	17	junction_2	13	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	175214276	175222783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175214367_175222239_175222367_175222572
ES.20998.92	chr2	+	4382	4	FSM	ENSMUSG00000078898.10	ENSMUST00000109047.3	1480	4	-4	-2898	-4	1900	multi-exon	FALSE	canonical	3	11	junction_3	13.8884444373331	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	175214280	175227894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175214367_175222239_175222367_175222572_175222634_175223786
ES.20998.93	chr2	+	177	1	Intergenic	novelGene_17385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	175299953	175300130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_175300000_175300100
ES.20998.94	chr2	+	6296	6	NNC	ENSMUSG00000078896.12	novel	957	4	NA	NA	17	3696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.3598715201217	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTT	NA	False	NA	NA	False	NA	NA	NA	175311794	175327660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175311916_175319791_175319919_175320124_175320186_175321337_175321513_175321596_175322002_175322253
ES.20998.95	chr2	+	7776	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	27	-6532	27	3698	multi-exon	FALSE	canonical	3	12	junction_2	42.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	175311804	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175311916_175319791_175319919_175320124
ES.20998.96	chr2	+	6610	4	FSM	ENSMUSG00000078896.12	ENSMUST00000109002.9	957	4	-37	-5616	-37	3698	multi-exon	FALSE	canonical	3	5	junction_3	41.8170619085878	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	175311818	175327662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175311916_175319791_175319919_175320124_175320186_175321337
ES.20998.97	chr2	+	7283	4	FSM	ENSMUSG00000078896.12	ENSMUST00000109002.9	957	4	-31	-6295	-31	4377	multi-exon	FALSE	canonical	3	5	junction_3	41.8170619085878	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCACGA	NA	False	NA	NA	False	NA	NA	NA	175311824	175328341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175311916_175319791_175319919_175320124_175320186_175321337
ES.20998.98	chr2	+	4776	7	Fusion	ENSMUSG00000078887.11_ENSMUSG00000078896.12	novel	1665	4	NA	NA	-25	2786	multi-exon	FALSE	canonical	0	0	junction_3	81.660714068775	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	175311830	175675827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175311916_175319791_175319919_175320124_175320186_175664841_175664897_175670021_175670149_175670349_175670411_175671567
ES.20998.99	chr2	+	6478	6	NNC	ENSMUSG00000078896.12	novel	957	4	NA	NA	-14	3693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.71593044902064	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175311841	175327657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175311916_175315069_175315134_175319791_175319919_175320124_175320186_175321337_175322086_175322253
ES.20999.1	chr2	-	177	2	Antisense	novelGene_ENSMUSG00000084050.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAAAATTAA	2074	False	NA	NA	False	NA	NA	NA	174978925	174847397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174847410_174978760
ES.20999.10	chr2	-	3350	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	4	-2729	4	2729	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174909552	174900612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.100	chr2	-	4476	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	50	-2672	9	-1177	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCTGCATCAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	175048660	175034034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.101	chr2	-	3993	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-1	-1444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.2455277419291	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGCGTGTCAAATTG	NA	False	NA	NA	False	NA	NA	NA	175048697	175034301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.102	chr2	-	4062	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-2	-1451	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.0995870424992	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	175048671	175034308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.103	chr2	-	4252	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	-3	-2395	-3	-1454	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	175048713	175034311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.104	chr2	-	2941	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	-13	-1074	-13	1074	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCTTTTCAGATTTCC	NA	False	NA	NA	False	NA	NA	NA	175048723	175035632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.105	chr2	-	465	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	39	1350	-2	678	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAGGACTT	NA	False	NA	NA	False	NA	NA	NA	175048671	175038056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.106	chr2	-	1498	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	-23	-510	-5	510	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGTGTAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	175048715	175038224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.107	chr2	-	1539	5	ISM	ENSMUSG00000078903.11	ENSMUST00000109056.8	1956	6	37	1537	-4	491	5prime_fragment	FALSE	canonical	3	9	junction_3	96.6087470159923	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTCATCAGTATA	NA	False	NA	NA	False	NA	NA	NA	175048673	175038243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.109	chr2	-	1310	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	1	-346	1	346	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	175048691	175038388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.11	chr2	-	3502	4	NNC	ENSMUSG00000078905.9	novel	625	4	NA	NA	-48	2728	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	27.4347711247363	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	174909622	174900613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174903715_174905309_174905454_174905660_174905788_174909492
ES.20999.110	chr2	-	1715	1	Intergenic	novelGene_17381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	175047909	175046194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175046200_175047900
ES.20999.111	chr2	-	1448	1	Intergenic	novelGene_17382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCATTTCTTCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	175149302	175147854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175147900_175149300
ES.20999.112	chr2	-	5006	6	NNC	ENSMUSG00000078899.10	novel	4402	5	NA	NA	-35	467	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	99.3124362806592	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGGGCCTGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	175180025	175163280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175167842_175168998_175169060_175169264_175169392_175175008_175175111_175176415_175176471_175179925
ES.20999.113	chr2	-	4170	1	Genic_Genomic	ENSMUSG00000078899.10	novel	NA	NA	NA	NA	1587	113	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTTTTTTAAAAAAG	8043	False	NA	NA	False	AATAAA	-18	NA	175167804	175163634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_175163600_175167800
ES.20999.114	chr2	-	4557	6	NNC	ENSMUSG00000078899.10	novel	4402	5	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	99.3124362806592	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175180043	175163747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175167842_175168998_175169060_175169264_175169392_175175008_175175111_175176415_175176471_175179925
ES.20999.115	chr2	-	4290	7	NNC	ENSMUSG00000078899.10	novel	4402	5	NA	NA	-39	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	94.63203591925	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175180029	175163749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175167256_175167506_175167842_175168998_175169060_175169264_175169392_175175008_175175111_175176415_175176471_175179925
ES.20999.116	chr2	-	5591	4	NIC	ENSMUSG00000078899.10	novel	4402	5	NA	NA	-35	-3	intron_retention	FALSE	canonical	3	21	junction_2	108.76988962433	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175180025	175163750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
ES.20999.117	chr2	-	2698	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-16	1720	-16	1068	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTGAAACCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	175180006	175165467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ES.20999.118	chr2	-	493	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-66	3975	-66	-1187	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAACCAATGTGGTAAG	NA	False	NA	NA	False	NA	NA	NA	175180056	175167722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ES.20999.119	chr2	-	1415	4	ISM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-12	4156	-12	-1368	5prime_fragment	FALSE	canonical	3	21	junction_2	108.76988962433	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	175180002	175167903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
ES.20999.12	chr2	-	3553	5	Fusion	ENSMUSG00000078905.9_ENSMUSG00000081949.4	novel	625	4	NA	NA	-134	2728	multi-exon	FALSE	canonical	0	0	junction_3	33.2217925464596	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	174951942	174900613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_174903715_174905392_174905454_174905660_174905788_174947936_174948064_174951805
ES.20999.13	chr2	-	4990	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	-48	-4378	-48	2621	multi-exon	FALSE	canonical	3	40	junction_1	14.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATCAGCTCCTGCCAC	NA	False	NA	NA	False	NA	NA	NA	174909622	174900720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174905454_174905660_174905788_174909492
ES.20999.14	chr2	-	3236	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	4	-2615	4	2615	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTCTGCATCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	174909552	174900726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.15	chr2	-	2994	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-30	-2339	-12	2339	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	174909586	174901002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.16	chr2	-	1903	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-36	-1242	-18	1242	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174909592	174902099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.17	chr2	-	407	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-31	249	-13	-249	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	174909587	174903590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.18	chr2	-	1961	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	-38	-1359	-38	-398	multi-exon	FALSE	canonical	3	40	junction_1	14.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTGCAAATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	174909612	174903739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174905454_174905660_174905788_174909492
ES.20999.19	chr2	-	1807	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	5	-1248	5	-509	multi-exon	FALSE	canonical	3	40	junction_1	14.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGTAATATTATGTT	NA	False	NA	NA	False	NA	NA	NA	174909569	174903850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174905454_174905660_174905788_174909492
ES.20999.2	chr2	-	156	2	Antisense	novelGene_ENSMUSG00000084050.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	390	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTAAATAAATCTTTT	2076	False	NA	NA	False	NA	NA	NA	174978923	174849554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174849574_174978786
ES.20999.20	chr2	-	207	1	Intergenic	novelGene_17373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAATATTTTAGTTGTAT	6747	False	NA	NA	False	NA	NA	NA	174920999	174920792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174920800_174921000
ES.20999.21	chr2	-	4179	1	Antisense	novelGene_ENSMUSG00000080888.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTGTACCCTATTGG	NA	False	NA	NA	False	NA	NA	NA	174932966	174928787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_174928800_174933000
ES.20999.22	chr2	-	1995	3	NNC	ENSMUSG00000081949.4	novel	401	4	NA	NA	-100	12267	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTACTCTTTTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	174951908	174933979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174935811_174947682_174947744_174951805
ES.20999.23	chr2	-	2322	4	NNC	ENSMUSG00000081949.4	novel	401	4	NA	NA	-345	12264	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	3.85861230093008	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTTTACTCTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	174952153	174933982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174935811_174947682_174947744_174947936_174948022_174951805
ES.20999.24	chr2	-	1325	3	NNC	ENSMUSG00000081949.4	novel	401	4	NA	NA	-132	11565	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1.5	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGCTTCTCAAAACATA	NA	False	NA	NA	False	AATAAA	-17	NA	174951940	174934681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174935811_174947682_174947744_174951805
ES.20999.25	chr2	-	5389	1	Intergenic	novelGene_17374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCAAAGCCACCCAGAAT	NA	False	NA	NA	False	NA	NA	NA	174968311	174962922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174962900_174968300
ES.20999.26	chr2	-	179	1	Intergenic	novelGene_17375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	174965492	174965313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174965300_174965500
ES.20999.27	chr2	-	5585	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-19	-3655	-19	3020	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTTGGATTCATGGCA	NA	False	NA	NA	False	NA	NA	NA	174983824	174968265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
ES.20999.28	chr2	-	1097	1	Intergenic	novelGene_17376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATACCTAATCCTTGGAA	NA	False	NA	NA	False	AGTAAA	-17	NA	174969607	174968510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174968500_174969600
ES.20999.29	chr2	-	5062	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-9	-3142	-9	2507	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGGAGGATCAGACAGA	NA	False	NA	NA	False	AATAAA	-32	NA	174983814	174968778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
ES.20999.3	chr2	-	302	4	Fusion	ENSMUSG00000078905.9_ENSMUSG00000085608.2_ENSMUSG00000081949.4	novel	564	3	NA	NA	-68	-15	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCATGACTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	174951876	174865161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_174865271_174905392_174905454_174947682_174947744_174951805
ES.20999.30	chr2	-	4442	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	19	64065	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTTTTTTTAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	175048650	174968792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968820_175033832_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.31	chr2	-	4958	3	NIC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	-19	2454	intron_retention	FALSE	canonical	3	23	junction_1	23	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATTAGACAATA	NA	False	NA	NA	False	NA	NA	NA	174983824	174968831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174973563_174974988_174975116_174983724
ES.20999.32	chr2	-	4969	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-43	-3015	-43	2380	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983848	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
ES.20999.33	chr2	-	7201	1	Genic_Genomic	ENSMUSG00000090093.9	novel	NA	NA	NA	NA	-991	2380	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	4893	False	NA	NA	False	NA	NA	NA	174976106	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_174968900_174976100
ES.20999.34	chr2	-	4362	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	8	63952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048684	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.35	chr2	-	5843	4	NNC	ENSMUSG00000078903.11	novel	1665	4	NA	NA	4638	63952	intron_retention	TRUE	non_canonical	0	0	junction_1	116.436916635385	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175040216	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036765_175037017_175039399_175039599
ES.20999.37	chr2	-	4330	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	19	63952	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048650	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036781_175037031_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.38	chr2	-	4368	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	1	63952	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048691	174968905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174969142_175034156_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.39	chr2	-	4428	8	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	19	63950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.8147674891726	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048650	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.4	chr2	-	3734	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-36	-3073	-18	3073	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGGACAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	174909592	174900268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.40	chr2	-	4893	4	NNC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	4	2378	intron_retention	FALSE	canonical	2	6	junction_3	10.4986771653491	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174983801	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174973563_174974721_174974783_174974988_174975089_174983724
ES.20999.41	chr2	-	4394	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-5	63950	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048715	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968945_175033958_175036781_175037030_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.42	chr2	-	4970	8	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	465	63950	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.5407762984399	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175044389	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036765_175037017_175037543_175037626_175037963_175038046_175038181_175039337_175039399_175039599_175039727_175043445
ES.20999.43	chr2	-	4865	3	NNC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	-29	2378	intron_retention	FALSE	canonical	2	6	junction_2	8.5	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	174983834	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174973563_174974988_174975089_174983724
ES.20999.44	chr2	-	4339	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	7	63950	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.1599007181501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048662	174968907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968933_175033946_175036787_175037038_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.45	chr2	-	3618	3	NNC	ENSMUSG00000078903.11	novel	1665	4	NA	NA	7060	63948	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	175037794	174968909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174968940_175033953_175036765_175037017
ES.20999.46	chr2	-	6089	3	FSM	ENSMUSG00000090093.9	ENSMUST00000109059.8	703	3	-21	-5365	-8	2376	multi-exon	FALSE	canonical	3	30	junction_1	19.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	174983813	174968909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174974783_174974988_174975116_174983724
ES.20999.47	chr2	-	4527	3	NIC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	-51	1991	intron_retention	FALSE	canonical	3	23	junction_1	23	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	174983856	174969294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174973563_174974988_174975116_174983724
ES.20999.48	chr2	-	4606	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	-69	-2626	-69	1991	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	174983874	174969294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
ES.20999.49	chr2	-	2921	3	NIC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	-8	428	intron_retention	FALSE	canonical	3	23	junction_1	23	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGAAACCTTTTCAG	NA	False	NA	NA	False	AATAAA	-13	NA	174983813	174970857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_174973563_174974988_174975116_174983724
ES.20999.5	chr2	-	3693	4	NNC	ENSMUSG00000078905.9	novel	625	4	NA	NA	78	3058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.3058142140496	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTAAAAAAAGGATG	NA	False	NA	NA	False	AATAAA	-2	NA	174909478	174900283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_174903715_174905392_174905454_174905660_174905788_174909404
ES.20999.50	chr2	-	1250	3	FSM	ENSMUSG00000090093.9	ENSMUST00000109059.8	703	3	-43	-504	-30	504	multi-exon	FALSE	canonical	3	30	junction_1	19.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	174983835	174973770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174974783_174974988_174975116_174983724
ES.20999.51	chr2	-	426	3	FSM	ENSMUSG00000090093.9	ENSMUST00000109059.8	703	3	-20	297	-7	146	multi-exon	FALSE	canonical	3	30	junction_1	19.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	174983812	174974571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174974783_174974988_174975116_174983724
ES.20999.52	chr2	-	5086	1	Genic_Genomic	ENSMUSG00000090093.9	novel	NA	NA	NA	NA	-6	-4008	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCAGACATGGTAAGT	NA	False	NA	NA	False	NA	NA	NA	174983811	174978725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_174978700_174983800
ES.20999.53	chr2	-	4243	1	Intergenic	novelGene_17378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTTGCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	175001892	174997649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_174997600_175001900
ES.20999.54	chr2	-	5579	1	Intergenic	novelGene_17379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	175005662	175000083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175000100_175005700
ES.20999.55	chr2	-	5810	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	19	-1313	19	1313	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAGCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	175017645	175006734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
ES.20999.56	chr2	-	6072	1	Genic_Genomic	ENSMUSG00000078902.4	novel	NA	NA	NA	NA	1292	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAGTATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	175012818	175006746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_175006700_175012800
ES.20999.57	chr2	-	4346	2	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	2466	917	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTTGCAGCGTCGT	NA	False	NA	NA	False	NA	NA	NA	175011644	175007130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175011028_175011195
ES.20999.59	chr2	-	4656	4	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.4866931898779	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017652	175008047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175012254_175013235_175013449_175013640_175013768_175017542
ES.20999.6	chr2	-	3704	4	Fusion	ENSMUSG00000078905.9_ENSMUSG00000081949.4	novel	625	4	NA	NA	-107	3033	multi-exon	FALSE	canonical	2	11	junction_3	30.0111090542597	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	174951915	174900308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_174903715_174905392_174905454_174905660_174905788_174951805
ES.20999.60	chr2	-	5644	3	NIC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	6	0	intron_retention	FALSE	canonical	3	122	junction_2	4	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017658	175008047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175013449_175013640_175013768_175017542
ES.20999.61	chr2	-	4875	9	Fusion	ENSMUSG00000078902.4_ENSMUSG00000078903.11	novel	4516	4	NA	NA	16	0	multi-exon	FALSE	canonical	0	0	junction_4	77.4608772219887	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175048653	175008047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542_175017599_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.62	chr2	-	3725	5	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.6333225737023	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017635	175008047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175009285_175010046_175012254_175013387_175013449_175013640_175013768_175017542
ES.20999.63	chr2	-	9413	2	NIC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	130	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017652	175008047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175013449_175013640
ES.20999.65	chr2	-	1997	4	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	57.1333722286915	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	175017634	175008051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175009769_175013387_175013449_175013640_175013768_175017542
ES.20999.66	chr2	-	5806	2	NIC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	32	-4	intron_retention	FALSE	canonical	3	122	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	175017632	175008051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175013768_175017542
ES.20999.68	chr2	-	3343	2	NNC	ENSMUSG00000078902.4	novel	4516	4	NA	NA	2294	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACTTGCTTCTTGGTC	NA	False	NA	-10	True	NA	NA	NA	175011816	175008053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175010974_175011393
ES.20999.69	chr2	-	4589	6	Fusion	ENSMUSG00000078902.4_ENSMUSG00000078903.11	novel	1956	6	NA	NA	9	-1497	multi-exon	TRUE	non_canonical	0	0	junction_1	85.2455277419291	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	175048660	175009544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175009554_175033930_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.7	chr2	-	3515	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-45	-2845	-27	2845	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	174909601	174900496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ES.20999.70	chr2	-	2985	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	32	1499	32	-1499	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGTTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175017632	175009546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
ES.20999.71	chr2	-	1630	7	Fusion	ENSMUSG00000078902.4_ENSMUSG00000078903.11	novel	965	4	NA	NA	7	-4286	multi-exon	FALSE	canonical	0	0	junction_3	75.3932284020846	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTCATAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	175048662	175012333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175013449_175013640_175013768_175017542_175017599_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.72	chr2	-	1200	3	ISM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	39	4411	39	-4411	5prime_fragment	FALSE	canonical	3	122	junction_2	4	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	175017625	175012458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_175013449_175013640_175013768_175017542
ES.20999.73	chr2	-	177	1	Intergenic	novelGene_17380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175030476	175030299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175030300_175030500
ES.20999.74	chr2	-	5086	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	27	-3259	9	-590	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTGGTGTTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	175048683	175033447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.75	chr2	-	4768	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	19	-595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.3623815533876	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGGGCCTGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	175048650	175033452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036765_175037017_175038181_175039337_175039399_175039599_175039700_175044851_175044907_175048573
ES.20999.76	chr2	-	11340	3	NIC	ENSMUSG00000078903.11	novel	965	4	NA	NA	7	-597	intron_retention	FALSE	canonical	3	82	junction_2	82.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTAGGGCCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	175048662	175033454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175039399_175039599_175044907_175048573
ES.20999.77	chr2	-	4776	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	1	-2923	1	-926	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAGACAGAAACATTCCT	NA	False	NA	NA	False	AATAAA	-40	NA	175048709	175033783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.79	chr2	-	4571	7	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-7	-988	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.0995870424992	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATTAGACAAT	NA	False	NA	NA	False	NA	NA	NA	175048717	175033845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.8	chr2	-	3497	4	Fusion	ENSMUSG00000078905.9_ENSMUSG00000081949.4	novel	625	4	NA	NA	-111	2822	multi-exon	FALSE	canonical	2	11	junction_3	30.0111090542597	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAATGAAGAAATA	NA	False	NA	NA	False	AAAAAG	-10	NA	174951919	174900519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_174903715_174905392_174905454_174905660_174905788_174951805
ES.20999.80	chr2	-	4667	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	-24	-2789	-24	-1060	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	175048734	175033917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.81	chr2	-	4741	6	FSM	ENSMUSG00000078903.11	ENSMUST00000109056.8	1956	6	3	-2788	3	-1061	multi-exon	FALSE	canonical	3	9	junction_4	88.9246872358852	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	175048707	175033918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ES.20999.82	chr2	-	5748	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	32	-4815	9	-1062	multi-exon	FALSE	canonical	3	66	junction_2	81.8141525382715	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048660	175033919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.83	chr2	-	3934	3	NNC	ENSMUSG00000078903.11	novel	1665	4	NA	NA	6833	-1062	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175038021	175033919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036871_175036954_175037627_175037710
ES.20999.84	chr2	-	4402	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-14	-1062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.2455277419291	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048724	175033919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036765_175037017_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.85	chr2	-	4612	5	NNC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	1	-1063	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	91.8667513303916	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	175048709	175033920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175038181_175039337_175039399_175039599_175039700_175044851_175044907_175048573
ES.20999.86	chr2	-	9825	8	Fusion	ENSMUSG00000078899.10_ENSMUSG00000078903.11	novel	1956	6	NA	NA	-31	-1064	multi-exon	TRUE	non_canonical	0	0	junction_4	109.009080318278	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175180021	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175046167_175046373_175050153_175168998_175169060_175169264_175169392_175179925
ES.20999.87	chr2	-	4762	6	Fusion	ENSMUSG00000082376.2_ENSMUSG00000078903.11	novel	1956	6	NA	NA	-22903	-1064	multi-exon	FALSE	canonical	0	0	junction_4	92.0534627268306	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175095987	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175072957_175073085_175095854
ES.20999.88	chr2	-	9763	4	NIC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	1	-1064	intron_retention	FALSE	canonical	3	35	junction_1	90.9077676671373	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048709	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175038181_175039337_175039399_175039599_175044907_175048573
ES.20999.89	chr2	-	3226	2	NNC	ENSMUSG00000078903.11	novel	1665	4	NA	NA	7035	-1064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175037819	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036871_175037542
ES.20999.9	chr2	-	5139	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	4	-4579	4	2822	multi-exon	FALSE	canonical	3	40	junction_1	14.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAATGAAGAAATA	NA	False	NA	NA	False	AAAAAG	-10	NA	174909570	174900519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_174905454_174905660_174905788_174909492
ES.20999.90	chr2	-	8117	2	ISM	ENSMUSG00000078903.11	ENSMUST00000099028.10	473	5	6457	1064	2615	-1064	internal_fragment	FALSE	canonical	3	247	junction_1	0	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175042239	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_175039399_175039599
ES.20999.91	chr2	-	4610	5	NNC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	1	-1064	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	91.6143411262669	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048709	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048601
ES.20999.92	chr2	-	3146	3	NNC	ENSMUSG00000078903.11	novel	1665	4	NA	NA	7198	-1064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175037656	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036870_175037038_175037207_175037626
ES.20999.93	chr2	-	4411	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	19	-1064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.2455277419291	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048650	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036871_175037038_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.94	chr2	-	4591	4	NIC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	-7	-1064	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	105.776493923114	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048717	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175038181_175039337_175039399_175039599_175039727_175048573
ES.20999.95	chr2	-	5762	5	NNC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	105	-1064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.2811628812327	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048564	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175047304
ES.20999.96	chr2	-	3172	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	-5	-1064	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.2455277419291	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175048715	175033921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175033996_175035467_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.97	chr2	-	4668	5	NNC	ENSMUSG00000078903.11	novel	1854	5	NA	NA	8	-1065	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.9433202604787	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175048684	175033922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175038181_175039281_175039399_175039599_175039727_175044851_175044907_175048573
ES.20999.98	chr2	-	4360	6	NNC	ENSMUSG00000078903.11	novel	1956	6	NA	NA	9	-1066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2455277419291	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	175048683	175033923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175036781_175037030_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ES.21.1	chr1	-	178	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGCAGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	5141412	5141234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_5141200_5141400
ES.210.1	chr1	-	179	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30623497	30623318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_30623300_30623500
ES.2100.1	chr1	+	171	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTAGAACAAGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	182037701	182037872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_182037700_182037900
ES.21000.1	chr2	-	175	1	Intergenic	novelGene_17383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175257853	175257678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175257700_175257900
ES.21001.1	chr2	-	4875	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	23	-3239	-2	3239	multi-exon	FALSE	canonical	2	6	junction_1	104.72911486306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAAAAGGCAATACT	NA	False	NA	NA	False	NA	NA	NA	175277577	175260853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.2	chr2	-	4479	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	-32	-2788	-32	2788	multi-exon	FALSE	canonical	2	6	junction_1	104.72911486306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175277632	175261304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.3	chr2	-	4570	6	NIC	ENSMUSG00000078897.11	novel	1659	5	NA	NA	-21	2788	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	98.2221970839586	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175277621	175261304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175265399_175266555_175266617_175266821_175266949_175272565_175272668_175273972_175274028_175277490
ES.21001.4	chr2	-	4053	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	5	-2399	-2	2399	multi-exon	FALSE	canonical	2	6	junction_1	104.72911486306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	175277595	175261693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.5	chr2	-	3269	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	-31	-1579	-31	1579	multi-exon	FALSE	canonical	2	6	junction_1	104.72911486306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTACTTTGTGAAGATT	NA	False	NA	NA	False	NA	NA	NA	175277631	175262513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.6	chr2	-	3007	6	NIC	ENSMUSG00000078897.11	novel	1659	5	NA	NA	-29	1217	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	98.2221970839586	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTATTGTCTTGCTT	NA	False	NA	NA	False	AAGAAA	-1	NA	175277629	175262875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_175265399_175266555_175266617_175266821_175266949_175272565_175272668_175273972_175274028_175277490
ES.21001.7	chr2	-	2737	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	-1	-1077	-1	1077	multi-exon	FALSE	canonical	2	6	junction_1	104.72911486306	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTCAGATTTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	175277601	175263015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.8	chr2	-	1390	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	-15	-177	3	177	multi-exon	FALSE	canonical	3	20	junction_2	107.953693776545	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGCTCTGTTCAATGAA	NA	False	NA	NA	False	NA	NA	NA	175277590	175265508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
ES.21001.9	chr2	-	140	1	Intergenic	novelGene_17384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGCAAGTTGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	175271349	175271209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175271200_175271300
ES.21002.1	chr2	-	2673	2	NNC	ENSMUSG00000095545.8	novel	1458	4	NA	NA	9589	4979	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175485850	175479036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175479103_175483243
ES.21002.10	chr2	-	326	1	FSM	ENSMUSG00000083481.5	ENSMUST00000118709.2	624	1	365	-67	365	67	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCACAGCTTTAGATTA	9144	False	NA	NA	False	NA	NA	NA	175597034	175596708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175596700_175597000
ES.21002.11	chr2	-	6268	7	NNC	ENSMUSG00000089756.3	novel	2939	4	NA	NA	23	22367	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.6999667331671	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGTCATGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	175722870	175688306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175688315_175707125_175712497_175712665_175713072_175713155_175713362_175714514_175714576_175714781_175714909_175722781
ES.21002.12	chr2	-	6960	6	NNC	ENSMUSG00000089756.3	novel	2939	4	NA	NA	12	4235	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.0246879560243	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175722881	175706438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175712508_175712674_175713072_175713155_175713362_175714514_175714576_175714781_175714909_175722781
ES.21002.13	chr2	-	6092	5	NNC	ENSMUSG00000089756.3	novel	2939	4	NA	NA	8024	3556	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.3289641300568	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	175714820	175707117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175712484_175712651_175713072_175713155_175713362_175714514_175714576_175714781
ES.21002.14	chr2	-	6575	4	FSM	ENSMUSG00000089756.3	ENSMUST00000108949.3	2939	4	-81	-3555	-32	3555	multi-exon	FALSE	canonical	3	12	junction_1	13.5728487143349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	175722925	175707118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175713362_175714514_175714576_175714781_175714909_175722781
ES.21002.15	chr2	-	4387	5	NNC	ENSMUSG00000089756.3	novel	2939	4	NA	NA	-23	3551	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_2	15.3133928311136	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	175722867	175707122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175707364_175709489_175713362_175714514_175714576_175714781_175714909_175722781
ES.21002.16	chr2	-	504	1	Intergenic	novelGene_17387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	175709757	175709253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175709300_175709800
ES.21002.17	chr2	-	4013	1	Intergenic	novelGene_17389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAATACTTA	NA	False	NA	NA	False	NA	NA	NA	175781091	175777078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175777100_175781100
ES.21002.18	chr2	-	3091	1	Antisense	novelGene_ENSMUSG00000078891.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTATTGTACCCTATT	NA	False	NA	NA	False	NA	NA	NA	175842829	175839738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_175839700_175842800
ES.21002.19	chr2	-	995	1	Intergenic	novelGene_17390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTCTTTTTTTTATA	NA	False	NA	NA	False	TATAAA	-17	NA	175846169	175845174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175845200_175846200
ES.21002.2	chr2	-	6122	5	NNC	ENSMUSG00000078889.12	novel	267	4	NA	NA	24	101433	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	42.145581025773	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	175592862	175479716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175479761_175577332_175583112_175584264_175584326_175584530_175584658_175592751
ES.21002.20	chr2	-	1289	3	NNC	ENSMUSG00000085103.4	novel	474	3	NA	NA	-3848	11933	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTGTGCTTCTCAAAACA	NA	False	NA	NA	False	AATAAA	-15	NA	175863507	175845882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175847006_175859274_175859336_175863402
ES.21002.3	chr2	-	7673	3	FSM	ENSMUSG00000095545.8	ENSMUST00000131041.2	252	3	-29	-7392	-29	4299	multi-exon	FALSE	canonical	3	23	junction_1	10.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	175495468	175479716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175487174_175487379_175487507_175495379
ES.21002.4	chr2	-	6541	4	FSM	ENSMUSG00000095545.8	ENSMUST00000179061.8	1458	4	-54	-5029	-54	4295	multi-exon	FALSE	canonical	3	10	junction_1	14.0079342596338	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	175495493	175479720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175485960_175487112_175487174_175487379_175487507_175495379
ES.21002.5	chr2	-	6089	5	NNC	ENSMUSG00000078889.12	novel	267	4	NA	NA	52	101426	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	42.145581025773	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	175592834	175479723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175479942_175577511_175583112_175584264_175584326_175584530_175584658_175592751
ES.21002.6	chr2	-	6777	4	FSM	ENSMUSG00000078889.12	ENSMUST00000123863.2	267	4	-83	-6427	49	4541	multi-exon	FALSE	canonical	3	11	junction_1	42.523196284172	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175592837	175576608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175583112_175584264_175584326_175584530_175584658_175592751
ES.21002.7	chr2	-	6099	4	FSM	ENSMUSG00000078889.12	ENSMUST00000123863.2	267	4	-86	-5746	46	3860	multi-exon	FALSE	canonical	3	11	junction_1	42.523196284172	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	175592840	175577289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175583112_175584264_175584326_175584530_175584658_175592751
ES.21002.8	chr2	-	1387	4	Fusion	ENSMUSG00000078889.12_ENSMUSG00000089756.3	novel	3438	3	NA	NA	-140614	-108	multi-exon	TRUE	non_canonical	0	0	junction_1	11.7851130197758	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTTCACGTGTGCCAA	NA	False	NA	NA	False	NA	NA	NA	175863507	175583143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_175583220_175713469_175714576_175714781_175714882_175863402
ES.21002.9	chr2	-	486	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	-7	2959	-7	-1073	multi-exon	FALSE	canonical	3	24	junction_1	41.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTGTTTGCAAGGC	NA	False	NA	NA	False	NA	NA	NA	175592893	175584108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_175584326_175584530_175584658_175592751
ES.21003.1	chr2	-	178	1	Intergenic	novelGene_17391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175877151	175876973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_175877000_175877200
ES.21004.1	chr2	-	4857	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3642	2920	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATCAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-38	NA	175895260	175880463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
ES.21004.10	chr2	-	4311	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3617	2399	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGATGTGTTTGCGTGTC	NA	False	NA	NA	False	NA	NA	NA	175895235	175880984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
ES.21004.11	chr2	-	4375	6	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3586	2392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.0342273600663	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTAGTGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	175895204	175880991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175890210_175890313_175891615_175891671_175895124
ES.21004.12	chr2	-	4007	3	ISM	ENSMUSG00000095648.8	ENSMUST00000109049.10	1749	4	5127	-2260	-1	2260	3prime_fragment	FALSE	canonical	3	96	junction_1	29.5	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTGTAAAAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	175886491	175881123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_175884942_175886096_175886158_175886363
ES.21004.13	chr2	-	439	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3593	1260	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	175895211	175884832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
ES.21004.14	chr2	-	6541	3	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-3597	1078	intron_retention	FALSE	canonical	3	44	junction_2	55.5	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATACAGATAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	175895215	175885014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175886158_175886363_175891671_175895124
ES.21004.15	chr2	-	1457	4	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-3642	1074	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	52.563189485503	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATTCATACAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	175895260	175885018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175886158_175886363_175886491_175891615_175891671_175895124
ES.21004.2	chr2	-	4732	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3650	2787	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	46.0027173110459	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175895268	175880596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175891615_175891671_175895124
ES.21004.4	chr2	-	10650	1	Genic_Genomic	ENSMUSG00000095648.8	novel	NA	NA	NA	NA	370	2785	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175891248	175880598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_175880600_175891200
ES.21004.5	chr2	-	4663	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3610	2785	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	56.6629287982893	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	175895228	175880598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886464_175891615_175891671_175895124
ES.21004.6	chr2	-	4943	5	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-4355	2784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.8567733290682	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175895973	175880599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175895124_175895401_175895836
ES.21004.7	chr2	-	10998	3	NNC	ENSMUSG00000095648.8	novel	195	3	NA	NA	-3639	2784	intron_retention	FALSE	canonical	3	44	junction_2	55.5	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175895257	175880599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175886158_175886363_175891671_175895124
ES.21004.8	chr2	-	4754	6	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3573	2784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.0342273600663	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175895191	175880599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175884942_175886096_175886158_175886363_175886491_175890210_175890313_175891615_175891671_175895124
ES.21004.9	chr2	-	5873	4	NNC	ENSMUSG00000095648.8	novel	1749	4	NA	NA	-3640	2783	intron_retention	FALSE	canonical	3	43	junction_2	52.563189485503	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	175895258	175880600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_175886158_175886363_175886491_175891615_175891671_175895124
ES.21005.1	chr2	+	3838	5	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	-35	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	28.0846933399672	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	3000	False	NA	NA	False	AATAAA	-33	NA	175968326	175982129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175968452_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ES.21005.10	chr2	+	4098	5	NIC	ENSMUSG00000078894.10	novel	2314	6	NA	NA	28	0	intron_retention	FALSE	canonical	2	2	junction_3	30.2241625194148	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	3067	False	NA	NA	False	AATAAA	-25	NA	175968393	175982121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_175968480_175971917_175971973_175973273_175973376_175977111_175977505_175978659
ES.21005.11	chr2	+	1640	5	Fusion	ENSMUSG00000078894.10_ENSMUSG00000094108.2	novel	3823	5	NA	NA	37	-83	intron_retention	FALSE	canonical	0	0	junction_1	16.6188898546203	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTTGCCCCAAATGAT	3076	False	NA	NA	False	NA	NA	NA	175968402	176000226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_175968480_175977111_175977239_175977443_175977505_175993312_175993496_175999034
ES.21005.12	chr2	+	5648	1	Intergenic	novelGene_17392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGAATGTTTCCGTGT	NA	False	NA	NA	False	NA	NA	NA	175987592	175993240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_175987600_175993200
ES.21005.2	chr2	+	3060	5	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	-23	-758	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	28.0846933399672	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGGACAGTTGGAGT	3012	False	NA	NA	False	NA	NA	NA	175968338	175981363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175968452_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ES.21005.3	chr2	+	3193	6	NNC	ENSMUSG00000078894.10	novel	2314	6	NA	NA	0	-760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.6887712215828	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACATTGGACAGTTGGA	3035	False	NA	NA	False	NA	NA	NA	175968361	175981361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175968480_175971917_175971973_175973273_175973376_175977111_175977239_175977443_175977505_175978631
ES.21005.4	chr2	+	3823	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	8	-8	4	8	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGGATAGACAGAAACAT	3043	False	NA	NA	False	AATAAA	-33	NA	175968369	175982129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ES.21005.5	chr2	+	497	4	ISM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	14	4467	10	146	5prime_fragment	FALSE	canonical	3	13	junction_2	10.9848380355227	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTAATTATTGTTTG	3049	False	NA	NA	False	NA	NA	NA	175968375	175977654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443
ES.21005.6	chr2	+	3119	6	NNC	ENSMUSG00000078894.10	novel	2314	6	NA	NA	16	-758	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	29.076450952618	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGGACAGTTGGAGT	3055	False	NA	NA	False	NA	NA	NA	175968381	175981363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175968452_175971917_175971973_175973273_175973376_175977111_175977239_175977443_175977505_175978659
ES.21005.7	chr2	+	449	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	21	3353	17	-634	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTATGACTGTAACCA	3056	False	NA	NA	False	NA	NA	NA	175968382	175978768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ES.21005.8	chr2	+	3557	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	30	236	26	-236	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCTGCATCAGCTCCT	3065	False	NA	NA	False	NA	NA	NA	175968391	175981885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ES.21005.9	chr2	+	3724	5	NNC	ENSMUSG00000078894.10	novel	3823	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	30.199337741083	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	3067	False	NA	NA	False	AATAAA	-25	NA	175968393	175982121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_175968452_175971917_175971973_175977111_175977200_175977443_175977505_175978659
ES.21006.1	chr2	+	179	1	Intergenic	novelGene_17393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCACATAATTATAAAA	NA	False	NA	NA	False	NA	NA	NA	176025958	176026137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176026000_176026100
ES.21007.1	chr2	+	3877	3	NNC	ENSMUSG00000082724.4	novel	2308	3	NA	NA	-798789	1476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	719	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	176031663	176835600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176031884_176830790_176830852_176832004
ES.21007.10	chr2	+	1245	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-58	-60	9	60	multi-exon	FALSE	canonical	3	22	junction_2	45	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGAGCCAGATAAT	NA	False	NA	NA	False	NA	NA	NA	176115395	176124939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176115528_176123621_176123749_176123953
ES.21007.100	chr2	+	3600	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-57	2343	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	148.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766055	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176766152_176776035_176776163_176778106
ES.21007.101	chr2	+	3748	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-52	2229	intron_retention	FALSE	canonical	3	164	junction_2	71.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	176766060	176781369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176766152_176776035_176776430_176778106
ES.21007.102	chr2	+	426	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	33908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.7424237454577	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCATGACTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	176766063	176813048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776035_176776163_176776368_176776430_176812939
ES.21007.103	chr2	+	436	5	NNC	ENSMUSG00000078872.10	novel	973	4	NA	NA	-49	33906	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	52.578512721453	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACCATGACTGTAAT	NA	False	NA	NA	False	NA	NA	NA	176766063	176813046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176772059_176772113_176776035_176776163_176776368_176776430_176812939
ES.21007.104	chr2	+	1914	4	NNC	ENSMUSG00000078872.10	novel	247	3	NA	NA	-49	-813	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	56.0495812255146	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAATTTAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	176766063	176778014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176772059_176772113_176776035_176776163_176776368
ES.21007.105	chr2	+	2060	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-49	-1063	-49	750	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	176766063	176779890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.106	chr2	+	4909	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	32410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.429927316676	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	176766063	176811550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176806917
ES.21007.107	chr2	+	418	3	Fusion	ENSMUSG00000082724.4_ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	-3131	multi-exon	FALSE	canonical	2	17	junction_2	145	279	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGGCAGATATGTAATT	NA	False	NA	NA	False	NA	NA	NA	176766063	176830993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176766152_176776035_176776163_176830790
ES.21007.108	chr2	+	3087	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	1838	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	148.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAGTGATGTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	176766063	176780978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176766152_176776035_176776163_176778106
ES.21007.109	chr2	+	3612	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	2303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.1082842501375	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACATCAGACAAT	NA	False	NA	90	True	NA	NA	NA	176766063	176781443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776077_176776163_176776368_176776430_176778106
ES.21007.11	chr2	+	7282	4	NNC	ENSMUSG00000089951.9	novel	1127	3	NA	NA	20	101014	intron_retention	TRUE	non_canonical	0	0	junction_3	48.451579494951	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	176115406	176228568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176115528_176123621_176123749_176123953_176130784_176228364
ES.21007.110	chr2	+	5116	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-49	2337	intron_retention	FALSE	non_canonical	0	0	junction_3	125.429927316676	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATGGCCTGGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	176766063	176781477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176776035_176776163_176776368_176778856_176779063
ES.21007.111	chr2	+	3470	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-41	2229	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	148.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	176766071	176781369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176766152_176776035_176776163_176778106
ES.21007.112	chr2	+	6718	3	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-41	13120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.5	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTTTGCTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	176766071	176792260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176776035_176776163_176785749
ES.21007.114	chr2	+	394	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-22	2253	-22	141	5prime_fragment	FALSE	canonical	3	143	junction_2	82	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGATATGTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	176766090	176776574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176766152_176776035_176776163_176776368
ES.21007.115	chr2	+	3711	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-6	2320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.387809200202	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAATGAAGAAATA	NA	False	NA	107	True	AAAAAG	-10	NA	176766106	176781460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776035_176776163_176776368_176776513_176778106
ES.21007.116	chr2	+	2014	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-1	33908	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	125.429927316676	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCATGACTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	176766111	176813048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176776035_176776163_176776368_176778011_176812843
ES.21007.117	chr2	+	2111	3	FSM	ENSMUSG00000078872.10	ENSMUST00000108968.2	247	3	-75	-1789	-66	-605	multi-exon	FALSE	canonical	3	47	junction_1	48	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	8	True	NA	NA	NA	176771982	176778222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176772113_176776035_176776163_176776368
ES.21007.118	chr2	+	3685	4	FSM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	-56	-2656	-56	2343	multi-exon	FALSE	canonical	3	47	junction_1	50.9313263129874	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176771992	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176772113_176776035_176776163_176776368_176776430_176778106
ES.21007.119	chr2	+	4832	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000078872.10	novel	973	4	NA	NA	-56	1067	multi-exon	TRUE	non_canonical	0	0	junction_1	46.6062108402827	659	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	176771992	177170989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176772201_176830790_176830852_176992796_176992885_177165078_177165206_177165410_177165472_177166618_177167674_177167757
ES.21007.12	chr2	+	7278	4	NNC	ENSMUSG00000089951.9	novel	1127	3	NA	NA	27	250645	intron_retention	TRUE	non_canonical	0	0	junction_3	48.451579494951	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176115413	176378199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176115528_176123621_176123749_176123953_176130798_176378006
ES.21007.120	chr2	+	1889	3	FSM	ENSMUSG00000078872.10	ENSMUST00000108968.2	247	3	-61	-1581	-52	-813	multi-exon	FALSE	canonical	3	47	junction_1	48	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAATTTAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	176771996	176778014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176772113_176776035_176776163_176776368
ES.21007.121	chr2	+	3842	4	FSM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	-25	-2844	-25	2531	multi-exon	FALSE	canonical	3	47	junction_1	50.9313263129874	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	176772023	176781671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176772113_176776035_176776163_176776368_176776430_176778106
ES.21007.122	chr2	+	3593	3	FSM	ENSMUSG00000078872.10	ENSMUST00000108969.3	1222	3	-28	-2343	-25	2343	multi-exon	FALSE	canonical	3	10	junction_2	18.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176772023	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176772113_176776035_176776163_176778106
ES.21007.123	chr2	+	172	1	Intergenic	novelGene_17413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGCATTAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	176772622	176772794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176772600_176772800
ES.21007.124	chr2	+	6357	3	ISM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	1195	-2656	1186	2343	3prime_fragment	FALSE	canonical	3	143	junction_1	10.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176773243	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176776163_176776368_176776430_176778106
ES.21007.125	chr2	+	4593	3	ISM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	1365	-1062	1356	749	3prime_fragment	FALSE	canonical	3	143	junction_1	10.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176773413	176779889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176776163_176776368_176776430_176778106
ES.21007.126	chr2	+	2542	3	ISM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	1742	612	1733	-612	3prime_fragment	FALSE	canonical	3	143	junction_1	10.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	1	True	NA	NA	NA	176773790	176778215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176776163_176776368_176776430_176778106
ES.21007.127	chr2	+	3282	1	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	2675	-813	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAATTTAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	176774732	176778014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176774700_176778000
ES.21007.128	chr2	+	1290	1	Genic_Genomic	ENSMUSG00000078872.10	novel	NA	NA	NA	NA	6302	509	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAACCTTTTCAGATTTC	NA	False	NA	NA	False	NA	NA	NA	176778359	176779649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_176778400_176779600
ES.21007.129	chr2	+	6426	1	Antisense	novelGene_ENSMUSG00000078870.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAATACTTA	192	False	NA	NA	False	NA	NA	NA	176871878	176878304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_176871900_176878300
ES.21007.13	chr2	+	386	3	Fusion	ENSMUSG00000089951.9_ENSMUSG00000095199.9	novel	1127	3	NA	NA	30	-388	multi-exon	FALSE	canonical	3	25	junction_2	21.5	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCACTGCTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	176115416	176221262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176115528_176220781_176220909_176221114
ES.21007.130	chr2	+	3786	2	Antisense	novelGene_ENSMUSG00000078870.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCAATACT	2661	False	NA	NA	False	NA	NA	NA	176874347	176878302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_176875030_176875198
ES.21007.131	chr2	+	6259	1	Antisense	novelGene_ENSMUSG00000078870.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTAGCATCTTGTATC	NA	False	NA	NA	False	NA	NA	NA	176890448	176896707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_176890400_176896700
ES.21007.132	chr2	+	184	1	Intergenic	novelGene_17419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAAATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	176939856	176940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176939900_176940000
ES.21007.133	chr2	+	4142	4	Intergenic	novelGene_17421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	176943740	176948121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176945533_176945631_176946285_176946377_176947976_176948022
ES.21007.135	chr2	+	181	1	Intergenic	novelGene_17424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	176954498	176954679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176954500_176954700
ES.21007.136	chr2	+	166	1	Intergenic	novelGene_17429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAACAAAACAAAAAAA	726	False	NA	NA	False	NA	NA	NA	177033395	177033561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177033400_177033600
ES.21007.137	chr2	+	4230	7	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-147115	2801	multi-exon	TRUE	non_canonical	0	0	junction_1	100.581227539404	1152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177042892	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177043097_177189964_177190122_177193600_177193679_177409836_177409964_177410168_177410230_177411379_177411586_177411669
ES.21007.138	chr2	+	3965	6	NNC	ENSMUSG00000094786.2	novel	774	2	NA	NA	-132531	2544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.632077725232	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	12	True	NA	NA	NA	177057476	177204100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177057488_177198620_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.139	chr2	+	156	1	Intergenic	novelGene_17430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	177144032	177144188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177144000_177144200
ES.21007.14	chr2	+	8542	2	FSM	ENSMUSG00000089951.9	ENSMUST00000172025.2	192	2	-8204	-146	31	146	multi-exon	FALSE	canonical	3	22	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	176115417	176124164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176123749_176123953
ES.21007.140	chr2	+	4470	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-134	1065	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	48.4071275743562	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177156391	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177166858_177167026_177167311_177167394_177167674_177167757
ES.21007.141	chr2	+	4309	4	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-35	2660	intron_retention	FALSE	canonical	3	106	junction_1	58.3837877040079	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTATTTTAAAAAGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	177156490	177204216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177198701_177198829_177199035_177199097_177200246
ES.21007.142	chr2	+	4620	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-34	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156491	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167982_177168066
ES.21007.144	chr2	+	4138	6	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-32	2548	multi-exon	TRUE	non_canonical	0	0	junction_5	97.2571848245671	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156493	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198728_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.145	chr2	+	5313	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-30	1760	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156495	177171682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167730_177167814
ES.21007.146	chr2	+	4433	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-28	2548	intron_retention	FALSE	canonical	1	2	junction_3	80.5460530793823	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156497	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177165078_177165206_177165410_177165472_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.147	chr2	+	4703	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-141	-2993	-28	1067	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	177156497	177170989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
ES.21007.148	chr2	+	4241	5	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-26	2546	intron_retention	FALSE	canonical	3	142	junction_1	41.6833300013327	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156499	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.15	chr2	+	6105	4	NNC	ENSMUSG00000089951.9	novel	643	4	NA	NA	-21	3435	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	43.6526695123626	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	176115432	176130989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176115528_176123621_176123749_176123953_176124015_176125167
ES.21007.150	chr2	+	5394	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-139	-3686	-26	1760	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156499	177171682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
ES.21007.151	chr2	+	480	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-139	2375	-26	-2375	5prime_fragment	FALSE	canonical	3	64	junction_2	12	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177156499	177165621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177156642_177165078_177165206_177165410
ES.21007.152	chr2	+	4612	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-26	1061	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	19	True	NA	NA	NA	177156499	177170983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167688_177167770
ES.21007.153	chr2	+	4361	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-26	1063	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.4071275743562	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156499	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177166858_177167026_177167311_177167394_177167688_177167770
ES.21007.154	chr2	+	5338	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-26	1760	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	50.4498513377393	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156499	177171682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165050_177165206_177165410_177165472_177166618_177167815_177167898
ES.21007.155	chr2	+	4618	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-26	1068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	26	True	NA	NA	NA	177156499	177170990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167674_177167757
ES.21007.156	chr2	+	4017	6	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-24	2548	multi-exon	FALSE	non_canonical	0	0	junction_4	97.7965234555912	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156501	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.157	chr2	+	4183	4	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-23	2546	intron_retention	FALSE	canonical	3	106	junction_1	58.3837877040079	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156502	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177198701_177198829_177199035_177199097_177200246
ES.21007.158	chr2	+	4155	6	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-22	2548	multi-exon	FALSE	non_canonical	0	0	junction_5	81.0802072024979	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156503	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200746_177200829
ES.21007.159	chr2	+	5304	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-20	1760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156505	177171682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167674_177167757
ES.21007.16	chr2	+	476	2	NNC	ENSMUSG00000089951.9	novel	1127	3	NA	NA	-15	32402	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTTGTTTGAAATAT	NA	False	NA	NA	False	ATTAAA	-9	NA	176115438	176159956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176115528_176159569
ES.21007.160	chr2	+	6535	3	ISM	ENSMUSG00000078866.11	ENSMUST00000099002.10	794	4	-20	-1760	-20	1760	intron_retention	FALSE	canonical	3	64	junction_2	12	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156505	177171682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177156642_177165078_177165206_177165410
ES.21007.161	chr2	+	4253	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-20	2546	multi-exon	FALSE	non_canonical	0	0	junction_6	87.1596555497757	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156505	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.162	chr2	+	4066	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-18	2548	multi-exon	FALSE	non_canonical	0	0	junction_5	91.4239210126832	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156507	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.163	chr2	+	4708	4	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-16	1061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.425589413672	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	19	True	NA	NA	NA	177156509	177170983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165055_177165206_177165410_177165472_177166618
ES.21007.164	chr2	+	1334	5	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-16	-709	multi-exon	FALSE	canonical	3	38	junction_3	84.7772817445806	765	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTGTGAGTTCGTCCT	NA	False	NA	NA	False	NA	NA	NA	177156509	177199953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035
ES.21007.165	chr2	+	4147	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-16	57338	multi-exon	TRUE	canonical	0	0	junction_5	91.4239210126832	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156509	177258894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.166	chr2	+	4019	5	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-15	2546	multi-exon	TRUE	non_canonical	0	0	junction_2	80.4036690705095	853	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156510	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177199035_177199097_177200246_177200659_177200742
ES.21007.167	chr2	+	4147	4	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-15	2546	intron_retention	FALSE	canonical	1	2	junction_1	103.609308891088	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156510	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156614_177198701_177198829_177199035_177199097_177200246
ES.21007.168	chr2	+	4249	8	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-15	57338	multi-exon	FALSE	non_canonical	0	0	junction_6	89.2794283501559	859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156510	177258894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204016_177258805
ES.21007.169	chr2	+	4112	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-15	1068	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	26	True	NA	NA	NA	177156510	177170990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177168076_177168654
ES.21007.17	chr2	+	6790	1	Genic_Genomic	ENSMUSG00000089951.9	novel	NA	NA	NA	NA	579	3436	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	176124200	176130990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_176124200_176131000
ES.21007.170	chr2	+	482	5	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-14	-307	multi-exon	FALSE	canonical	3	142	junction_1	41.6833300013327	770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	14	True	NA	NA	NA	177156511	177200355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.171	chr2	+	4082	6	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	-7	57336	multi-exon	FALSE	non_canonical	0	0	junction_4	97.7965234555912	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177156518	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204016_177258805
ES.21007.172	chr2	+	4588	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-2	1067	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	38.9358446678636	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	177156523	177170989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165467_177166618_177167665_177167748
ES.21007.173	chr2	+	5822	3	ISM	ENSMUSG00000078866.11	ENSMUST00000099002.10	794	4	-1	-1066	-1	1066	intron_retention	FALSE	canonical	3	64	junction_2	12	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177156524	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177156642_177165078_177165206_177165410
ES.21007.174	chr2	+	2731	4	NNC	ENSMUSG00000078866.11	novel	794	4	NA	NA	-1	13661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.1423687391577	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAATGATCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	177156524	177183583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177181157
ES.21007.175	chr2	+	5735	4	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-1	1063	intron_retention	FALSE	non_canonical	0	0	junction_3	37.1423687391577	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156524	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177167674_177167757
ES.21007.176	chr2	+	4548	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	-1	1065	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	50.4498513377393	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177156524	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165120_177165206_177165410_177165472_177166618_177167708_177167791
ES.21007.177	chr2	+	4694	8	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	4	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.3938771288408	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156529	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177159487_177159854_177165078_177165206_177165410_177165472_177166618_177166858_177167026_177167312_177167397_177167674_177167757
ES.21007.178	chr2	+	5277	6	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	5	57338	intron_retention	FALSE	non_canonical	0	0	junction_4	96.3190531514923	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177156530	177258894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177200570_177200654_177204016_177258805
ES.21007.18	chr2	+	4618	4	NNC	ENSMUSG00000089951.9	novel	643	4	NA	NA	2658	250646	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	176126279	176378200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176128862_176128955_176130800_176226254_176226329_176378082
ES.21007.180	chr2	+	1323	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-101	1494	12	-1494	5prime_fragment	FALSE	canonical	3	64	junction_2	12	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAGATTGCTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	177156537	177166502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177156642_177165078_177165206_177165410
ES.21007.181	chr2	+	5324	4	NNC	ENSMUSG00000078866.11	novel	794	4	NA	NA	13	1757	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	44.5146667465405	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177156538	177171679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156614_177165078_177165206_177165410_177165472_177166618
ES.21007.182	chr2	+	4574	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	16	1066	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177156541	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167731_177167814
ES.21007.183	chr2	+	4324	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	16	2654	multi-exon	FALSE	canonical	0	0	junction_6	87.1596555497757	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTATTTATTTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	177156541	177204210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200570_177200654
ES.21007.185	chr2	+	4624	4	NNC	ENSMUSG00000078866.11	novel	794	4	NA	NA	19	1063	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	44.5146667465405	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156544	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156614_177165078_177165206_177165410_177165472_177166618
ES.21007.186	chr2	+	4212	8	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	19	57336	multi-exon	FALSE	canonical	0	0	junction_6	89.2794283501559	859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177156544	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.187	chr2	+	4593	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	20	1061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.4498513377393	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	19	True	NA	NA	NA	177156545	177170983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165050_177165206_177165410_177165472_177166618_177167674_177167757
ES.21007.188	chr2	+	3806	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	20	1058	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	48.4071275743562	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAAGACTTGCCTTGGT	NA	False	NA	16	True	NA	NA	NA	177156545	177170980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177166891_177167562_177167708_177167791_177168002_177168085
ES.21007.189	chr2	+	4080	7	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	20	57335	multi-exon	FALSE	canonical	0	0	junction_5	100.427005000315	859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177156545	177258891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156614_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.19	chr2	+	4272	3	NNC	ENSMUSG00000089951.9	novel	643	4	NA	NA	3096	250644	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	176126717	176378198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176130800_176226254_176226329_176378082
ES.21007.190	chr2	+	4292	8	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	27	2546	multi-exon	TRUE	non_canonical	0	0	junction_7	85.9266417073427	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156552	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177165078_177165206_177165410_177165472_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.191	chr2	+	4320	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	27	1063	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.4904858224107	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156552	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165485_177166618_177166858_177167026_177167311_177167394_177167674_177167757
ES.21007.192	chr2	+	4946	6	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	27	1058	intron_retention	FALSE	non_canonical	0	0	junction_3	37.9978946785213	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAAGACTTGCCTTGGT	NA	False	NA	16	True	NA	NA	NA	177156552	177170980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177166891_177167562_177167708_177167791_177168002_177168085
ES.21007.193	chr2	+	3798	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	27	1058	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	48.4071275743562	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAAGACTTGCCTTGGT	NA	False	NA	16	True	NA	NA	NA	177156552	177170980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177166891_177167562_177167708_177167791_177168013_177168097
ES.21007.194	chr2	+	5458	6	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	27	1067	intron_retention	FALSE	non_canonical	0	0	junction_3	37.9978946785213	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	177156552	177170989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177166858_177167026_177167311_177167394_177167665_177167748
ES.21007.195	chr2	+	4559	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	28	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156553	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177168001_177168084
ES.21007.196	chr2	+	4558	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	28	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156553	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167817_177167901
ES.21007.197	chr2	+	4564	9	Fusion	ENSMUSG00000078866.11_ENSMUSG00000094786.2	novel	794	4	NA	NA	29	2546	intron_retention	FALSE	canonical	0	0	junction_3	81.7640469583056	853	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177156554	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177156642_177165078_177165206_177165410_177165472_177188538_177188627_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.198	chr2	+	4643	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	29	1065	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	38.9358446678636	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177156554	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165555_177166618_177167917_177168000
ES.21007.199	chr2	+	4304	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	48.4071275743562	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156555	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177166813_177166979_177167312_177167397_177167674_177167757
ES.21007.2	chr2	+	7474	2	NNC	ENSMUSG00000084858.2	novel	2306	2	NA	NA	-8917	-3186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATATGTAATTATTGTT	NA	False	NA	NA	False	NA	NA	NA	176031702	176041175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176032232_176034230
ES.21007.20	chr2	+	3615	1	Intergenic	novelGene_17395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	176128052	176131667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176128100_176131700
ES.21007.200	chr2	+	4557	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1063	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177156555	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167708_177167791
ES.21007.202	chr2	+	16431	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-83	-14779	30	12853	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCACCAGGGATTGAC	NA	False	NA	NA	False	AAGAAA	-6	NA	177156555	177182775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
ES.21007.204	chr2	+	3762	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1065	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.6062108402827	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177156555	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165120_177165206_177165410_177165472_177166618_177166891_177167562_177167737_177167819_177168010_177168093
ES.21007.205	chr2	+	5195	6	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.1148625686492	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177156555	177171680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167708_177167791_177170257_177170313
ES.21007.206	chr2	+	3888	7	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1066	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	36.4904858224107	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177156555	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165555_177166618_177166891_177167562_177167708_177167790_177168002_177168085
ES.21007.207	chr2	+	4560	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	30	1066	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	44.2965856472031	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177156555	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618_177167581_177167664
ES.21007.208	chr2	+	11094	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	2211	1066	intron_retention	TRUE	non_canonical	0	0	junction_2	27.712812921102	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177158849	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177165206_177165410_177166891_177167562_177167708_177167791_177168003_177168086
ES.21007.209	chr2	+	11913	1	Genic_Genomic	ENSMUSG00000078866.11	novel	NA	NA	NA	NA	2436	1065	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177159074	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177159100_177171000
ES.21007.21	chr2	+	2476	1	Intergenic	novelGene_17396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCATAGACTCATGTTTT	NA	False	NA	NA	False	NA	NA	NA	176128171	176130647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176128200_176130600
ES.21007.210	chr2	+	6284	2	Genic_Genomic	ENSMUSG00000094786.2	novel	701	4	NA	NA	-29719	-477	multi-exon	TRUE	non_canonical	0	0	junction_1	0	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTCATCGGTATAA	NA	False	NA	NA	False	NA	NA	NA	177160288	177200185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177160317_177193929
ES.21007.211	chr2	+	6879	5	NNC	ENSMUSG00000078864.11	novel	1074	3	NA	NA	-239632	2803	intron_retention	TRUE	non_canonical	0	0	junction_1	111.077394189817	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177161448	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177161771_177407072_177409964_177410168_177410230_177411379_177411586_177411669
ES.21007.212	chr2	+	7669	3	ISM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	5326	-2989	5326	1063	3prime_fragment	FALSE	canonical	3	64	junction_1	28.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177161964	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177165206_177165410_177165472_177166618
ES.21007.213	chr2	+	5872	6	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	6786	1063	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.7688425124074	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177163424	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177165206_177165410_177165472_177166618_177166858_177167026_177167311_177167394_177167674_177167757
ES.21007.214	chr2	+	4873	4	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	8040	1065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.425589413672	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	23	True	NA	NA	NA	177164678	177170987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177165206_177165410_177165472_177166618_177167708_177167791
ES.21007.215	chr2	+	4777	4	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	8132	1061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.425589413672	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	19	True	NA	NA	NA	177164770	177170983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177165206_177165410_177165472_177166618_177167674_177167757
ES.21007.216	chr2	+	5307	5	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	8501	1066	intron_retention	FALSE	non_canonical	0	0	junction_2	27.712812921102	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	24	True	NA	NA	NA	177165139	177170988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177165206_177165410_177166858_177167026_177167311_177167394_177167674_177167757
ES.21007.217	chr2	+	5154	2	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	9107	1061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	19	True	NA	NA	NA	177165745	177170983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177167731_177167814
ES.21007.22	chr2	+	482	3	FSM	ENSMUSG00000095199.9	ENSMUST00000238365.2	753	3	-46	317	-20	-317	multi-exon	FALSE	canonical	3	25	junction_2	11	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGTTTGCAAGACTT	NA	False	NA	NA	False	NA	NA	NA	176212772	176221333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176212909_176220781_176220909_176221114
ES.21007.220	chr2	+	3169	3	NNC	ENSMUSG00000078866.11	novel	1569	4	NA	NA	11012	1063	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	21	True	NA	NA	NA	177167650	177170985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177167782_177167863_177168010_177168093
ES.21007.222	chr2	+	3679	2	Intergenic	novelGene_17431	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	90	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCACCAGGGATTGAC	NA	False	NA	NA	False	AAGAAA	-6	NA	177177641	177182775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177178422_177179876
ES.21007.223	chr2	+	176	1	Intergenic	novelGene_17432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATGTTTTTTGGAA	NA	False	NA	NA	False	NA	NA	NA	177183729	177183905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177183700_177183900
ES.21007.224	chr2	+	4805	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-273	-3323	-173	3031	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGATTTGTTTTTCTGC	NA	False	NA	NA	False	AGTAAA	-45	NA	177189834	177204587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ES.21007.225	chr2	+	4374	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-71	2647	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAGTAAAATTATTTA	NA	False	NA	115	True	AATAAA	-5	NA	177189936	177204203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.226	chr2	+	4304	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-147	-2948	-47	2656	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATTTATTTTAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	177189960	177204212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ES.21007.227	chr2	+	9333	4	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-43	2545	intron_retention	FALSE	non_canonical	0	0	junction_3	81.3278686688777	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177189964	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177200435_177200518
ES.21007.228	chr2	+	3962	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-43	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.6822207485031	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189964	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177200246_177200570_177200654_177201191_177201274
ES.21007.229	chr2	+	4161	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-43	57338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.248213748197	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177189964	177258894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.23	chr2	+	6599	4	NNC	ENSMUSG00000095199.9	novel	1458	4	NA	NA	1	2989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.2006944318862	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	176212819	176228567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176212909_176220781_176220909_176221114_176221259_176222328
ES.21007.230	chr2	+	4349	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-43	2548	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189964	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.231	chr2	+	4243	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-41	2546	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189966	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.232	chr2	+	4019	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-41	2801	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189966	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
ES.21007.234	chr2	+	4161	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-41	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189966	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.235	chr2	+	4132	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-41	2435	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGCATCAGATCCTGC	NA	False	NA	-97	True	NA	NA	NA	177189966	177203991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.236	chr2	+	1329	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-39	-622	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	177189968	177200040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ES.21007.237	chr2	+	439	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-39	-267	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	841	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177189968	177411488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
ES.21007.238	chr2	+	883	4	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-39	-1040	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	100.797927668292	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTATTCTTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	177189968	177199622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190083_177193535_177193591_177198701_177198829_177199035
ES.21007.239	chr2	+	2619	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-39	1064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.910326696146	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTGCTTCTTGGTCAT	NA	False	NA	-2	True	NA	NA	NA	177189968	177202620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654
ES.21007.24	chr2	+	6518	4	FSM	ENSMUSG00000095199.9	ENSMUST00000178443.2	1458	4	-29	-5031	1	2991	multi-exon	FALSE	canonical	3	10	junction_3	15.195028426722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	176212819	176228569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176212909_176220781_176220909_176221114_176221176_176222328
ES.21007.240	chr2	+	4207	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-39	2652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.910326696146	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAATTATTTATTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	177189968	177204208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654
ES.21007.241	chr2	+	3627	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-39	2411	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177189968	177414676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
ES.21007.242	chr2	+	2764	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-39	1069	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	3	True	NA	NA	NA	177189968	177202625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.243	chr2	+	4213	3	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-36	2637	intron_retention	FALSE	canonical	3	19	junction_2	51.5	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATGAAGAAGTA	NA	False	NA	105	True	AAAAAG	-10	NA	177189971	177204193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177198701_177198829_177200246
ES.21007.244	chr2	+	4632	4	FSM	ENSMUSG00000094786.2	ENSMUST00000142549.2	701	4	-36	-3895	-36	3001	multi-exon	FALSE	canonical	3	19	junction_3	74.0915349790754	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGCAATACTTAGGGC	NA	False	NA	NA	False	AGTAAA	-15	NA	177189971	177204557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177193535_177193591_177198701_177198829_177200246
ES.21007.245	chr2	+	4156	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-36	2546	intron_retention	TRUE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189971	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200857_177200938
ES.21007.246	chr2	+	2778	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-35	1069	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	3	True	NA	NA	NA	177189972	177202625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.247	chr2	+	4285	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-34	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177189973	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200666_177200717
ES.21007.248	chr2	+	4151	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-33	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177189974	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.249	chr2	+	4799	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-33	3008	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTTAGGGCCTGGTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	177189974	177204564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.25	chr2	+	7199	4	FSM	ENSMUSG00000095199.9	ENSMUST00000178443.2	1458	4	-26	-5715	4	3675	multi-exon	FALSE	canonical	3	10	junction_3	15.195028426722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176212822	176229253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176212909_176220781_176220909_176221114_176221176_176222328
ES.21007.250	chr2	+	4831	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-30	3127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGAGATTCCCTGCCC	NA	False	NA	NA	False	NA	NA	NA	177189977	177204683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.251	chr2	+	4136	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-18	57336	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	95.248213748197	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189989	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177203740_177258528
ES.21007.252	chr2	+	1452	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-17	-477	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	39.4208066888541	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTCATCGGTATAA	NA	False	NA	NA	False	NA	NA	NA	177189990	177200185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ES.21007.253	chr2	+	7947	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	93.1270100454213	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177189993	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.254	chr2	+	1364	3	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-14	-479	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	122.5	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAGACTCATCGGTAT	NA	False	NA	NA	False	NA	NA	NA	177189993	177200183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190083_177198701_177198829_177199035
ES.21007.255	chr2	+	4124	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	2547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	15	True	NA	NA	NA	177189993	177204103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200767_177200859
ES.21007.256	chr2	+	4047	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-14	2801	multi-exon	FALSE	canonical	3	49	junction_2	85.9200209497181	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189993	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.257	chr2	+	4131	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	57336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.248213748197	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189993	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204016_177258805
ES.21007.258	chr2	+	4131	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	2545	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177189993	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200758_177200841
ES.21007.259	chr2	+	4190	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-14	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	107.767527576724	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189993	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198728_177198829_177199035_177199180_177200246_177200705_177200788
ES.21007.26	chr2	+	4709	7	Fusion	ENSMUSG00000078878.10_ENSMUSG00000095199.9	novel	461	4	NA	NA	5	2788	multi-exon	FALSE	canonical	0	0	junction_1	63.6302251729126	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176212823	176416394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176212909_176365516_176365671_176370328_176370456_176370661_176370723_176410749_176410877_176411081_176411143_176412300
ES.21007.260	chr2	+	4135	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-14	2548	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189993	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200462_177200544
ES.21007.261	chr2	+	3655	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-12	2156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.248213748197	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTAGTGATGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	177189995	177203712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.262	chr2	+	4072	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-11	57336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.9991836700694	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177189996	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.263	chr2	+	4067	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-9	2548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	82.9306939558569	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189998	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177200246_177200570_177200654
ES.21007.264	chr2	+	470	5	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-8	-300	combination_of_known_junctions	FALSE	canonical	3	153	junction_2	35.4436171968946	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	21	True	NA	NA	NA	177189999	177200362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.265	chr2	+	4145	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-8	2803	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	887	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177189999	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.266	chr2	+	3923	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-8	2157	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177189999	177203713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.267	chr2	+	1297	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-8	-583	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	177189999	177411172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
ES.21007.268	chr2	+	4073	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-8	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.910326696146	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177189999	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.269	chr2	+	469	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	-7	-260	multi-exon	FALSE	canonical	3	49	junction_2	85.9200209497181	841	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	177190000	177411495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.27	chr2	+	4046	2	NNC	ENSMUSG00000095199.9	novel	750	4	NA	NA	11674	152618	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	176224522	176378196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176228468_176378095
ES.21007.270	chr2	+	4127	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-7	2548	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190000	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200842_177200925
ES.21007.271	chr2	+	5361	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-7	2548	intron_retention	FALSE	canonical	3	153	junction_2	39.4208066888541	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190000	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035
ES.21007.272	chr2	+	4159	5	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	-3	2924	multi-exon	FALSE	canonical	3	35	junction_2	90.385286413221	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTCAGACAGAAACATT	NA	False	NA	NA	False	AATAAA	-27	NA	177190004	177415189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177193535_177193591_177409836_177409964_177410168_177410230_177411379
ES.21007.273	chr2	+	1409	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-102	1052	-2	-450	5prime_fragment	FALSE	canonical	3	122	junction_1	63.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTCACATGTGCA	NA	False	NA	NA	False	NA	NA	NA	177190005	177200212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177190111_177198701_177198829_177199035
ES.21007.274	chr2	+	4066	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-2	57336	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	97.9991836700694	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177190005	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200549_177200631_177204016_177258805
ES.21007.275	chr2	+	3589	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	0	2157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	97.9991836700694	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177190007	177203713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.276	chr2	+	4151	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	2	57336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.366037119523	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177190009	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177190799_177190892_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204066_177258856
ES.21007.277	chr2	+	4218	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	2	2548	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190009	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200436_177200521
ES.21007.278	chr2	+	4003	7	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	2	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	99.9566572737071	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190009	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190083_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.279	chr2	+	5679	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	3	4026	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGGGAGAAATCGATGA	NA	False	NA	NA	False	NA	NA	NA	177190010	177205582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.28	chr2	+	6663	4	FSM	ENSMUSG00000078879.11	ENSMUST00000108985.9	1295	4	-52	-5316	-12	5316	multi-exon	FALSE	canonical	3	5	junction_3	41.4085337420521	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176362302	176378199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176362453_176370328_176370456_176370661_176370723_176371874
ES.21007.280	chr2	+	567	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	5	-292	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	82.9216497665115	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAGGACTT	NA	False	NA	29	True	NA	NA	NA	177190012	177200370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.281	chr2	+	4166	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	6	2544	intron_retention	FALSE	canonical	2	4	junction_1	89.0519511296636	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	12	True	NA	NA	NA	177190013	177204100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190083_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.282	chr2	+	4195	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	6	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.76626419591	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190013	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199180_177200246_177200659_177200742
ES.21007.284	chr2	+	3467	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	6	2102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.6822207485031	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTAAAGTCTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	177190013	177203658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177200246_177200570_177200654_177201191_177201274
ES.21007.285	chr2	+	5592	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	6	4026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGGGAGAAATCGATGA	NA	False	NA	NA	False	NA	NA	NA	177190013	177205582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.286	chr2	+	3805	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	6	2155	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTAGTGATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177190013	177203711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.287	chr2	+	4028	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	6	2546	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	95.248213748197	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190013	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200519_177200602_177201191_177201274
ES.21007.288	chr2	+	4053	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	6	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.9306939558569	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190013	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177200246_177200435_177200518
ES.21007.289	chr2	+	1408	4	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	8	-456	multi-exon	FALSE	canonical	3	49	junction_2	20.8326666559997	838	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATATAGATAA	NA	False	NA	NA	False	NA	NA	NA	177190015	177411299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177409836_177409964_177410168
ES.21007.29	chr2	+	5034	10	NNC	ENSMUSG00000078879.11	novel	697	7	NA	NA	-15	5516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.2588813290405	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176362339	176416394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176362453_176370328_176370456_176370661_176370723_176398646_176398734_176400010_176400218_176403673_176403729_176405033_176405136_176410749_176410877_176411081_176411143_176412300
ES.21007.290	chr2	+	4106	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	12	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190019	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200412_177200495
ES.21007.291	chr2	+	1297	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	12	-705	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	90.6211206066224	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGTTCGTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	177190019	177199957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035
ES.21007.292	chr2	+	3907	3	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1074	3	NA	NA	14	2805	multi-exon	FALSE	canonical	1	7	junction_2	29.5	887	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177190021	177415070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177409836_177409964_177411379
ES.21007.293	chr2	+	4239	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000094786.2	novel	1077	4	NA	NA	14	2919	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	887	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	177190021	177415184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.294	chr2	+	5356	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	14	2546	intron_retention	FALSE	non_canonical	0	0	junction_5	96.7892556020553	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190021	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177200435_177200518
ES.21007.295	chr2	+	387	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-85	907	15	-305	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCATGACTGTAACCAAT	NA	False	NA	16	True	NA	NA	NA	177190022	177200357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ES.21007.296	chr2	+	4088	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	2671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	97.9991836700694	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGGGTCAGACAGA	NA	False	NA	NA	False	AATAAA	-29	NA	177190022	177204227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.297	chr2	+	4047	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	57336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	97.9991836700694	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177190022	177258892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177204016_177258805
ES.21007.298	chr2	+	4088	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	2671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	97.9991836700694	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGGGTCAGACAGA	NA	False	NA	NA	False	AATAAA	-29	NA	177190022	177204227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201179_177201262
ES.21007.299	chr2	+	562	4	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	-720	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	98.435540103946	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTGTGCAAGTACTGT	NA	False	NA	NA	False	NA	NA	NA	177190022	177199942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177199656
ES.21007.3	chr2	+	5030	3	Fusion	ENSMUSG00000084858.2_ENSMUSG00000095199.9	novel	2306	2	NA	NA	2520	152620	multi-exon	TRUE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	176043139	176378198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176043257_176223657_176228420_176378047
ES.21007.30	chr2	+	6582	4	NNC	ENSMUSG00000078879.11	novel	1295	4	NA	NA	-13	5316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.04155872120988	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176362341	176378199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176362453_176370370_176370456_176370661_176370723_176371874
ES.21007.300	chr2	+	4650	5	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	15	3009	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTAGGGCCTGGTGTT	NA	False	NA	NA	False	AGTAAA	-23	NA	177190022	177204565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.301	chr2	+	3740	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-85	-2446	15	2154	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTAGTGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	177190022	177203710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ES.21007.302	chr2	+	4567	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	3011	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGGGCCTGGTGTTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	177190023	177204567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.303	chr2	+	2623	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	1	True	NA	NA	NA	177190023	177202623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.304	chr2	+	751	4	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	-530	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	98.435540103946	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTAGATTGCTATGTTC	NA	False	NA	NA	False	NA	NA	NA	177190023	177200132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177199656
ES.21007.305	chr2	+	4102	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190023	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.306	chr2	+	4308	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	16	2545	intron_retention	FALSE	non_canonical	0	0	junction_4	76.4669046058489	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177190023	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177199097_177200246_177200705_177200788
ES.21007.307	chr2	+	4204	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190023	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.308	chr2	+	4206	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190023	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.309	chr2	+	4216	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2660	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTATTTTAAAAAGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	177190023	177204216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.31	chr2	+	4767	8	NIC	ENSMUSG00000078879.11	novel	697	7	NA	NA	1	5516	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.7960848342535	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176362355	176416394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176362453_176370661_176370723_176398646_176398734_176400032_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.310	chr2	+	4243	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.192548320792	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190023	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194526_177194668_177198701_177198829_177199035_177199097_177200246_177200659_177200742
ES.21007.311	chr2	+	3968	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	16	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.1737489744233	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190023	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177199035_177199097_177200246_177200767_177200859
ES.21007.312	chr2	+	4099	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	17	2544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.2706430862642	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	12	True	NA	NA	NA	177190024	177204100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200746_177200829
ES.21007.313	chr2	+	4130	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-83	-2838	17	2546	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190024	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ES.21007.314	chr2	+	3921	4	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	17	2548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.9671956592216	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190024	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177199035_177199097_177200246_177200705_177200788
ES.21007.316	chr2	+	3974	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	17	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.1737489744233	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190024	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177199035_177199097_177200246_177200659_177200742
ES.21007.317	chr2	+	5253	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	17	2548	intron_retention	TRUE	non_canonical	0	0	junction_4	92.2835304916321	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190024	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177200855_177200938
ES.21007.318	chr2	+	2804	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	21	1067	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	1	True	NA	NA	NA	177190028	177202623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
ES.21007.319	chr2	+	3967	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	23	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.1737489744233	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177190030	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177199035_177199097_177200246_177200842_177200925
ES.21007.32	chr2	+	3280	10	NNC	ENSMUSG00000078879.11	novel	697	7	NA	NA	1	3778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.2588813290405	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTTAGGAATATAA	NA	False	NA	NA	False	AATGAA	-15	NA	176362355	176414656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176362453_176370328_176370456_176370661_176370723_176398646_176398734_176400010_176400218_176403673_176403729_176405033_176405136_176410749_176410877_176411081_176411143_176412300
ES.21007.321	chr2	+	4195	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	25	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	92.1479788166838	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190032	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200855_177200938
ES.21007.322	chr2	+	2558	5	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	26	1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.910326696146	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	1	True	NA	NA	NA	177190033	177202623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246_177200435_177200518
ES.21007.323	chr2	+	3898	3	Fusion	ENSMUSG00000080709.2_ENSMUSG00000094786.2	novel	3051	3	NA	NA	26	-726	intron_retention	FALSE	canonical	0	0	junction_1	0	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177190033	177379824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177190122_177193600_177193679_177376092
ES.21007.324	chr2	+	3801	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	26	2151	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	92.1479788166838	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGACACTAGTGATGTG	NA	False	NA	NA	False	NA	NA	NA	177190033	177203707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246_177200486_177200567
ES.21007.325	chr2	+	4217	5	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	26	-307	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	97.6380433028028	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	14	True	NA	NA	NA	177190033	177200355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190083_177193535_177193591_177194885_177198829_177199035_177199097_177200246
ES.21007.326	chr2	+	4094	6	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	26	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	103.637059008831	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177190033	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193600_177198708_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.327	chr2	+	4208	7	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-50	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.192548320792	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177190057	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177190111_177193535_177193591_177194526_177194668_177198701_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.328	chr2	+	4031	4	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	3350	2545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.0898099734624	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177193457	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177193591_177198701_177198829_177200246_177200705_177200788
ES.21007.329	chr2	+	428	4	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	3352	-307	combination_of_known_junctions	FALSE	canonical	3	153	junction_1	40.9254063985795	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	14	True	NA	NA	NA	177193459	177200355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177193591_177198701_177198829_177199035_177199097_177200246
ES.21007.33	chr2	+	4873	7	Fusion	ENSMUSG00000078875.11_ENSMUSG00000078879.11	novel	1749	4	NA	NA	1	2787	multi-exon	FALSE	canonical	0	0	junction_2	59.6473432397081	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176362355	176707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176362453_176370328_176370456_176526998_176527060_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ES.21007.330	chr2	+	5522	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	3369	909	3369	-307	3prime_fragment	FALSE	canonical	3	176	junction_2	36.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	14	True	NA	NA	NA	177193476	177200355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177198829_177199035_177199097_177200246
ES.21007.331	chr2	+	4243	1	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	4610	-1702	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATGGAGTTAATAACT	NA	False	NA	NA	False	NA	NA	NA	177194717	177198960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177194700_177199000
ES.21007.332	chr2	+	6654	2	NIC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-4064	2546	intron_retention	FALSE	canonical	3	176	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177196298	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177199097_177200246
ES.21007.333	chr2	+	3938	1	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-3945	-307	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	506	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	14	True	NA	NA	NA	177196417	177200355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177196400_177200400
ES.21007.334	chr2	+	5871	3	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	6767	-2838	-3488	2546	3prime_fragment	FALSE	canonical	3	176	junction_2	36.5	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177196874	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177198829_177199035_177199097_177200246
ES.21007.335	chr2	+	2525	1	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	-3278	-1053	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGAATTTTCACTTGTT	NA	False	NA	NA	False	NA	NA	NA	177197084	177199609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177197100_177199600
ES.21007.336	chr2	+	6818	3	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-3248	2545	intron_retention	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	13	True	NA	NA	NA	177197114	177204101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177200570_177200654_177201191_177201274
ES.21007.337	chr2	+	3880	4	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-3056	1068	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	104.512625499931	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCTTGGTCATGATG	NA	False	NA	2	True	NA	NA	NA	177197306	177202624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177198829_177199035_177199097_177200246_177200443_177200523
ES.21007.338	chr2	+	5304	4	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-3005	2546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.512625499931	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	177197357	177204102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177198829_177199035_177199097_177200246_177200705_177200788
ES.21007.339	chr2	+	6388	2	NNC	ENSMUSG00000094786.2	novel	774	2	NA	NA	-2730	2548	intron_retention	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177197632	177204104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177200705_177200788
ES.21007.34	chr2	+	7283	4	FSM	ENSMUSG00000078879.11	ENSMUST00000108985.9	1295	4	9	-5997	-9	5997	multi-exon	FALSE	canonical	3	5	junction_3	41.4085337420521	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCACGATG	NA	False	NA	NA	False	NA	NA	NA	176362363	176378880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176362453_176370328_176370456_176370661_176370723_176371874
ES.21007.340	chr2	+	5620	3	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	-1964	57338	intron_retention	FALSE	canonical	0	0	junction_1	0	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177198398	177258894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177200570_177200654_177204066_177258856
ES.21007.341	chr2	+	1503	2	ISM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	8368	1079	-1887	-477	internal_fragment	FALSE	canonical	3	249	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTCATCGGTATAA	NA	False	NA	NA	False	NA	NA	NA	177198475	177200185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177198829_177199035
ES.21007.342	chr2	+	5846	1	Genic_Genomic	ENSMUSG00000094786.2	novel	NA	NA	NA	NA	-626	4026	mono-exon	FALSE	NA	NA	NA	NA	NA	576	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGGGAGAAATCGATGA	NA	False	NA	NA	False	NA	NA	NA	177199736	177205582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177199700_177205600
ES.21007.343	chr2	+	3457	2	NNC	ENSMUSG00000094786.2	novel	1209	4	NA	NA	324	2671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGGGTCAGACAGA	NA	False	NA	NA	False	AATAAA	-29	NA	177200686	177204227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177200855_177200938
ES.21007.344	chr2	+	693	1	Intergenic	novelGene_17440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTGCTTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	177258196	177258889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177258200_177258900
ES.21007.345	chr2	+	180	1	Intergenic	novelGene_17441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	177259017	177259197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177259000_177259200
ES.21007.346	chr2	+	882	4	Intergenic	novelGene_17442	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.4246870437348	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTGTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	177292038	177305429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177292109_177303443_177303609_177304013_177304102_177304870
ES.21007.347	chr2	+	1108	5	Intergenic	novelGene_17443	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	5.1234753829798	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTGGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	177292087	177305427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177292231_177295046_177295176_177303443_177303609_177304013_177304102_177304844
ES.21007.348	chr2	+	1575	4	NNC	ENSMUSG00000078864.11	novel	1074	3	NA	NA	-108971	39400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0357882380471	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGCCGGGCAATGATG	NA	False	NA	NA	False	CATAAA	-4	NA	177292109	177451665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177292231_177409836_177409964_177410168_177410230_177450399
ES.21007.349	chr2	+	4191	1	Genic_Genomic	ENSMUSG00000080709.2	novel	NA	NA	NA	NA	-452	-719	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177375640	177379831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177375600_177379800
ES.21007.35	chr2	+	4880	9	NNC	ENSMUSG00000078879.11	novel	697	7	NA	NA	-9	5516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.628997731498	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176362363	176416394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176362453_176370328_176370456_176370661_176370723_176398646_176398734_176400010_176400190_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.350	chr2	+	1664	3	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-318	-456	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	31	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATATAGATAA	NA	False	NA	NA	False	NA	NA	NA	177400762	177411299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177409836_177409964_177410168
ES.21007.351	chr2	+	4217	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-60	2801	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401020	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.352	chr2	+	4110	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-53	-3313	-53	2803	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401027	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.353	chr2	+	4073	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-53	2803	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401027	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.354	chr2	+	4175	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-53	2803	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401027	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.355	chr2	+	4015	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-52	2801	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	100.353818506766	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401028	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379
ES.21007.356	chr2	+	1586	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-50	-460	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	126.631117818647	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAACAATTCATATAG	NA	False	NA	NA	False	NA	NA	NA	177401030	177411295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168
ES.21007.357	chr2	+	525	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	-41	260	-41	-260	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	177401039	177411495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.358	chr2	+	4617	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-32	3266	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTTGGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	177401048	177415531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.359	chr2	+	4274	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-29	2926	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTCAGACAGAAACATTCC	NA	False	NA	NA	False	AATAAA	-29	NA	177401051	177415191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.36	chr2	+	4901	9	NNC	ENSMUSG00000078879.11	novel	697	7	NA	NA	-6	5512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.0272686966507	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176362366	176416390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176362453_176370328_176370456_176370661_176370723_176398646_176398734_176400010_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.360	chr2	+	2701	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-29	1316	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	177401051	177413581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.361	chr2	+	1601	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-22	-456	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	135.454789505576	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATATAGATAA	NA	False	NA	NA	False	NA	NA	NA	177401058	177411299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405627_177405769_177409531_177409569_177409836_177409964_177410168
ES.21007.362	chr2	+	6506	3	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-21	-452	intron_retention	FALSE	canonical	3	293	junction_2	26.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCATATAGATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	177401059	177411303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177409569_177409836
ES.21007.363	chr2	+	6107	9	Fusion	ENSMUSG00000074519.12_ENSMUSG00000078864.11	novel	744	6	NA	NA	-11	4757	multi-exon	TRUE	non_canonical	0	0	junction_4	89.5935265518665	644	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCATGGTATCTG	NA	False	NA	NA	False	NA	NA	NA	177401069	177680572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379_177411670_177412580_177412585_177548421_177548465_177655125_177655397_177662703_177662952_177675608
ES.21007.365	chr2	+	4101	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-9	2801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.3783524425501	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177401071	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401141_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.366	chr2	+	588	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-9	-267	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177401071	177411488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.367	chr2	+	4276	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-1	2919	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	177401079	177415184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.368	chr2	+	1934	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-1	39401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.955676644314	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCGGGCAATGATGG	NA	False	NA	NA	False	CATAAA	-5	NA	177401079	177451666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379_177411514_177446974_177447231_177450399
ES.21007.369	chr2	+	6151	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-1	-582	intron_retention	FALSE	canonical	3	97	junction_3	107.096010922702	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTTCCCATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	177401079	177411173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177409569_177409836_177409964_177410168
ES.21007.37	chr2	+	7054	1	Genic_Genomic	ENSMUSG00000078879.11	novel	NA	NA	NA	NA	8769	5312	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	176371141	176378195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_176371100_176378200
ES.21007.370	chr2	+	9020	1	Genic_Genomic	ENSMUSG00000078864.11	novel	NA	NA	NA	NA	-1	-1656	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTATTAGTAACTTAAATA	NA	False	NA	NA	False	NA	NA	NA	177401079	177410099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177401100_177410100
ES.21007.371	chr2	+	2473	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	1312	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	100.353818506766	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177401081	177413577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379
ES.21007.372	chr2	+	541	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	-267	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177401081	177411488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.373	chr2	+	391	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	-260	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	100.353818506766	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	177401081	177411495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379
ES.21007.374	chr2	+	3626	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	2410	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAGTGATGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	177401081	177414675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.375	chr2	+	2632	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	1314	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_3	118.732640836461	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	177401081	177413579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
ES.21007.376	chr2	+	3483	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	1	2322	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	100.353818506766	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATTGAACTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	177401081	177414587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177409836_177409964_177410168_177410230_177411379
ES.21007.377	chr2	+	404	3	Fusion	ENSMUSG00000074521.10_ENSMUSG00000078864.11	novel	744	6	NA	NA	2	-136	multi-exon	FALSE	canonical	3	23	junction_2	161.5	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGTTAGTAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	177401082	177546340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177401169_177404638_177404694_177546077
ES.21007.378	chr2	+	581	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000078864.11	novel	744	6	NA	NA	2	146	multi-exon	FALSE	canonical	2	8	junction_3	136.696744657655	475	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177401082	177546622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177401169_177404638_177404694_177405994_177406097_177546077_177546205_177546411
ES.21007.379	chr2	+	577	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	2	-269	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	133.779819105873	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACACCATGACTGTAAC	NA	False	NA	NA	False	NA	NA	NA	177401082	177411486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401169_177404638_177404694_177405627_177405769_177409836_177409964_177410168_177410230_177411379
ES.21007.38	chr2	+	5848	3	NNC	ENSMUSG00000078879.11	novel	1295	4	NA	NA	9637	5310	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176372009	176378193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176372063_176372146_176372539_176372790
ES.21007.380	chr2	+	1169	4	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	8	-680	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	130.176802849048	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGTGCAAACACTGT	NA	False	NA	NA	False	NA	NA	NA	177401088	177411075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168
ES.21007.381	chr2	+	4148	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	9	2940	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCTTCCAAATTATAGC	NA	False	NA	NA	False	AATAAA	-43	NA	177401089	177415205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.382	chr2	+	4503	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	9	-3768	9	3258	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGGGCCTGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177401089	177415523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ES.21007.383	chr2	+	444	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	11	-252	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAGGACTT	NA	False	NA	NA	False	NA	NA	NA	177401091	177411503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.384	chr2	+	5360	3	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	15	2803	intron_retention	FALSE	canonical	3	49	junction_2	148.5	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177401095	177415068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_177401169_177404638_177404694_177409836
ES.21007.385	chr2	+	4357	6	NNC	ENSMUSG00000078864.11	novel	1074	3	NA	NA	66	3256	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	105.981885244602	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTAGGGCCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	177401146	177415521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401180_177404703_177404782_177409836_177409964_177410168_177410230_177411379_177411586_177411669
ES.21007.386	chr2	+	3998	5	NNC	ENSMUSG00000078864.11	novel	1077	4	NA	NA	387	2800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.60726095165	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177401467	177415065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177401537_177404638_177404694_177409836_177409964_177410168_177410230_177411379
ES.21007.387	chr2	+	4457	3	ISM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	5305	440	1695	-440	internal_fragment	FALSE	canonical	3	97	junction_2	98	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGACTCATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	177406385	177411315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177409569_177409836_177409964_177410168
ES.21007.388	chr2	+	5673	3	FSM	ENSMUSG00000078864.11	ENSMUST00000108942.5	1074	3	-1798	-2801	-1798	2801	multi-exon	FALSE	canonical	3	97	junction_1	87.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177408038	177415066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177409964_177410168_177410230_177411379
ES.21007.389	chr2	+	2782	2	ISM	ENSMUSG00000078864.11	ENSMUST00000108942.5	1074	3	-1651	1093	-1651	-583	5prime_fragment	FALSE	canonical	3	97	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	177408185	177411172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177409964_177410168
ES.21007.39	chr2	+	1492	2	Intergenic	novelGene_17400	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAAGTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	176388496	176392873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176389670_176392554
ES.21007.390	chr2	+	305	2	ISM	ENSMUSG00000078864.11	ENSMUST00000108942.5	1074	3	28	1891	28	-1381	5prime_fragment	FALSE	canonical	3	97	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCATGTATGTAATTATT	NA	False	NA	NA	False	NA	NA	NA	177409864	177410374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177409964_177410168
ES.21007.391	chr2	+	3885	2	ISM	ENSMUSG00000078864.11	ENSMUST00000108942.5	1074	3	329	-2935	329	2935	3prime_fragment	FALSE	canonical	3	272	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACATTCCTTCCAAATT	NA	False	NA	NA	False	AATAAA	-38	NA	177410165	177415200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_177410230_177411379
ES.21007.392	chr2	+	2133	1	Genic_Genomic	ENSMUSG00000078864.11	novel	NA	NA	NA	NA	1260	964	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGAAAAAAGGCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	177411096	177413229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177411100_177413200
ES.21007.393	chr2	+	3029	2	Intergenic	novelGene_17445	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAAGAAACCTTTCAA	NA	False	NA	NA	False	AATGAA	-8	NA	177420539	177426769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177422260_177425460
ES.21007.394	chr2	+	188	1	Intergenic	novelGene_17449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	1771	False	NA	NA	False	NA	NA	NA	177466540	177466728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177466500_177466700
ES.21007.395	chr2	+	200	1	Intergenic	novelGene_17451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAATC	NA	False	NA	NA	False	NA	NA	NA	177488866	177489066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177488900_177489100
ES.21007.396	chr2	+	4711	5	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	10	133679	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.6607363679077	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTTTCTTGGTGATGA	NA	False	NA	NA	False	NA	NA	NA	177538898	177681256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177551646_177680901
ES.21007.397	chr2	+	4092	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	10	2618	multi-exon	FALSE	non_canonical	0	0	junction_4	21.6029511872799	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	177538898	177678433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674915_177674998
ES.21007.398	chr2	+	6719	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	12	5443	multi-exon	FALSE	non_canonical	0	0	junction_4	6.29980158417708	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTTGGTGATGATG	NA	False	NA	NA	False	NA	NA	NA	177538900	177681258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539019_177546077_177546205_177673382_177673444_177674593_177674927_177675178
ES.21007.399	chr2	+	4542	6	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	13	133681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.5777663348179	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTTGGTGATGATG	NA	False	NA	NA	False	NA	NA	NA	177538901	177681258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177547883_177548050_177551646_177680901
ES.21007.4	chr2	+	4887	2	Fusion	ENSMUSG00000084858.2_ENSMUSG00000089951.9	novel	2306	2	NA	NA	2665	3435	multi-exon	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	176043284	176130989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176043568_176126385
ES.21007.40	chr2	+	2899	1	Intergenic	novelGene_17401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAAGTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	176389974	176392873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176390000_176392900
ES.21007.400	chr2	+	6225	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	14	4754	multi-exon	TRUE	non_canonical	0	0	junction_4	21.6029511872799	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177538902	177680569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674942_177675024
ES.21007.401	chr2	+	4016	4	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	16	3734	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	19.3620476419435	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	177538904	177551311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625
ES.21007.402	chr2	+	5961	6	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	16	4755	multi-exon	FALSE	non_canonical	0	0	junction_4	6.24819974072532	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177538904	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539019_177546077_177546205_177673382_177673444_177674593_177674927_177675178_177677705_177677770
ES.21007.403	chr2	+	3778	5	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	23	3671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.6607363679077	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGACTGAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	177538911	177551248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177547883_177548050
ES.21007.404	chr2	+	6214	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	25	4755	multi-exon	FALSE	non_canonical	0	0	junction_4	21.6029511872799	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177538913	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674915_177674998
ES.21007.405	chr2	+	4732	6	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	37	133679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.7508241608958	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTTTCTTGGTGATGA	NA	False	NA	NA	False	NA	NA	NA	177538925	177681256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546689_177547625_177547883_177548050_177551646_177680901
ES.21007.406	chr2	+	3999	4	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	39	3717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.5854314646552	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTATAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	177538927	177551294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546054_177546205_177546411_177546473_177547625
ES.21007.407	chr2	+	3988	5	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	39	130859	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.6607363679077	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177538927	177678436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177551274_177678403
ES.21007.408	chr2	+	6188	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	39	4755	multi-exon	FALSE	non_canonical	0	0	junction_4	21.6029511872799	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177538927	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177675061_177675156
ES.21007.409	chr2	+	6887	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	40	5443	multi-exon	FALSE	non_canonical	0	0	junction_4	21.6029511872799	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTTGGTGATGATG	NA	False	NA	NA	False	NA	NA	NA	177538928	177681258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674915_177674998
ES.21007.41	chr2	+	4600	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-39	-2915	-39	2915	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAGGATCAGACAG	NA	False	NA	NA	False	AATAAA	-31	NA	176400081	176416521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.410	chr2	+	3816	6	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	44	130860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.5777663348179	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177538932	177678437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177547883_177548050_177551274_177678403
ES.21007.411	chr2	+	3896	6	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	46	24381	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.5777663348179	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	177538934	177571958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177548219_177548302_177551283_177571935
ES.21007.412	chr2	+	4062	6	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	47	4749	multi-exon	TRUE	non_canonical	0	0	junction_4	21.0295030849519	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	177538935	177680564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674915_177674998_177678252_177680375
ES.21007.413	chr2	+	3800	5	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	58	3730	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.6607363679077	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	177538946	177551307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177547897_177548066
ES.21007.414	chr2	+	6173	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	68	4754	multi-exon	TRUE	non_canonical	0	0	junction_4	21.6029511872799	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177538956	177680569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177546077_177546205_177673382_177673444_177674593_177674968_177675048
ES.21007.415	chr2	+	3874	5	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	69	3729	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.6607363679077	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	177538957	177551306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177548219_177548302
ES.21007.416	chr2	+	4404	6	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	69	133681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.5777663348179	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTTGGTGATGATG	NA	False	NA	NA	False	NA	NA	NA	177538957	177681258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546077_177546205_177546411_177546473_177547625_177547887_177548136_177551646_177680901
ES.21007.418	chr2	+	6715	6	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	70	4755	multi-exon	TRUE	non_canonical	0	0	junction_1	8.2365041127896	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177538958	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539047_177667845_177668391_177673047_177673175_177673382_177673444_177674593_177674935_177675017
ES.21007.419	chr2	+	3748	4	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	70	3731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.71404520791032	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	177538958	177551308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177539047_177546411_177546473_177547625_177548219_177548302
ES.21007.42	chr2	+	994	5	NNC	ENSMUSG00000078878.10	novel	1167	4	NA	NA	-39	-341	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	71.6323076551356	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGAATTTTCACTTGT	NA	False	NA	NA	False	NA	NA	NA	176400081	176411655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176400218_176403673_176403729_176405033_176405136_176410749_176410877_176411081
ES.21007.421	chr2	+	6654	5	Fusion	ENSMUSG00000074521.10_ENSMUSG00000074519.12	novel	1451	3	NA	NA	76	5441	multi-exon	FALSE	non_canonical	0	0	junction_1	11.4891252930761	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTTTCTTGGTGATGA	NA	False	NA	NA	False	NA	NA	NA	177538964	177681256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_177539020_177546077_177546205_177546411_177546473_177674593_177674927_177675178
ES.21007.422	chr2	+	4751	2	NNC	ENSMUSG00000074521.10	novel	1451	3	NA	NA	478	130859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177546555	177678436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177551274_177678403
ES.21007.423	chr2	+	3489	3	Intergenic	novelGene_17452	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	177547650	177678438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177547895_177548063_177551274_177678403
ES.21007.424	chr2	+	2280	2	Intergenic	novelGene_17453	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	177551156	177680566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177551274_177678403
ES.21007.425	chr2	+	7526	1	Antisense	novelGene_ENSMUSG00000078862.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTAGCATCTTGTATC	NA	False	NA	NA	False	NA	NA	NA	177590041	177597567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_177590000_177597600
ES.21007.426	chr2	+	156	1	Intergenic	novelGene_17456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	177653311	177653467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177653300_177653500
ES.21007.427	chr2	+	6324	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	-156	-4755	-61	4755	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177665015	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
ES.21007.428	chr2	+	6035	5	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-53	4754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.17635004720366	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177665023	177680569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177673444_177674593_177674927_177675178
ES.21007.429	chr2	+	6279	4	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-44	4755	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4.92160768674447	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177665032	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177673444_177674593
ES.21007.43	chr2	+	4542	6	NNC	ENSMUSG00000078878.10	novel	1646	5	NA	NA	-37	2785	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	66.9668574744254	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	176400083	176416391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176400190_176403673_176403729_176405033_176405136_176410749_176410877_176411081_176411143_176412300
ES.21007.430	chr2	+	6992	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	-136	-5443	-41	5443	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTTGGTGATGATG	NA	False	NA	NA	False	NA	NA	NA	177665035	177681258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
ES.21007.431	chr2	+	5941	6	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-25	4754	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	7.56306816047562	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177665051	177680569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177673444_177674593_177674950_177675201_177677705_177677770
ES.21007.433	chr2	+	6218	5	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-23	4753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.22409163839994	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	177665053	177680568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177673658_177674593_177674927_177675178
ES.21007.434	chr2	+	7143	4	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-12	4751	intron_retention	TRUE	non_canonical	0	0	junction_3	7.84573486395988	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	177665064	177680566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177674968_177675217
ES.21007.435	chr2	+	6490	4	NNC	ENSMUSG00000074519.12	novel	1413	4	NA	NA	-12	4756	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	15.1510909031513	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	177665064	177680571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665175_177673047_177673175_177673382_177673658_177674593
ES.21007.436	chr2	+	7140	4	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	-7	4755	intron_retention	FALSE	non_canonical	0	0	junction_3	7.84573486395988	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177665069	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177674950_177675201
ES.21007.437	chr2	+	6670	5	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	0	5442	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.17635004720366	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTTTCTTGGTGATGAT	NA	False	NA	NA	False	NA	NA	NA	177665076	177681257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177673382_177673444_177674593_177674927_177675178
ES.21007.438	chr2	+	5915	4	NNC	ENSMUSG00000074519.12	novel	923	3	NA	NA	1	4749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.09120616516523	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	177665077	177680564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665147_177673047_177673175_177674593_177674927_177675178
ES.21007.439	chr2	+	4118	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	-86	-2619	9	2619	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	177665085	177678434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
ES.21007.44	chr2	+	483	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-34	1197	-34	413	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	176400086	176412409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.440	chr2	+	3911	4	NNC	ENSMUSG00000074519.12	novel	1413	4	NA	NA	21	21363	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	14.7648230602334	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTGTCTCCTCTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	177665097	177697178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177665175_177673047_177673175_177673382_177673444_177693532
ES.21007.441	chr2	+	6427	4	NNC	ENSMUSG00000074519.12	novel	1413	4	NA	NA	7524	4749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.04155872120988	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	177672695	177680564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177673175_177673382_177673444_177674593_177674915_177674998
ES.21007.442	chr2	+	6610	1	Genic_Genomic	ENSMUSG00000074519.12	novel	NA	NA	NA	NA	8789	4755	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	177673960	177680570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_177674000_177680600
ES.21007.443	chr2	+	6425	1	Intergenic	novelGene_17457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAAGGATCCTTGCAG	NA	False	NA	NA	False	NA	NA	NA	177685278	177691703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177685300_177691700
ES.21007.444	chr2	+	3656	1	Intergenic	novelGene_17458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGGATAGGAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	177685306	177688962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177685300_177689000
ES.21007.445	chr2	+	3751	1	Intergenic	novelGene_17459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATCTTTCACT	NA	False	NA	NA	False	NA	NA	NA	177687131	177690882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_177687100_177690900
ES.21007.45	chr2	+	4077	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	-33	-2398	-33	2398	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGATGTGTTTGCGTG	NA	False	NA	NA	False	NA	NA	NA	176400087	176416004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ES.21007.46	chr2	+	4151	6	NNC	ENSMUSG00000078878.10	novel	1646	5	NA	NA	-21	2786	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.6094332626852	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176400099	176416392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300_176415072_176415373
ES.21007.47	chr2	+	4385	4	NIC	ENSMUSG00000078878.10	novel	1646	5	NA	NA	-6	2788	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	75.3171073971025	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176400114	176416394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176400218_176410749_176410877_176411081_176411143_176412300
ES.21007.48	chr2	+	5550	3	ISM	ENSMUSG00000078878.10	ENSMUST00000108983.4	1497	4	-111	-2784	-111	2784	intron_retention	FALSE	canonical	3	21	junction_1	78.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176403614	176416390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176403729_176410749_176410877_176411081
ES.21007.49	chr2	+	5089	3	NNC	ENSMUSG00000078878.10	novel	1646	5	NA	NA	1496	12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	89	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGAGTTCTTCCTGTT	NA	False	NA	NA	False	NA	NA	NA	176405221	176412008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176406586_176408078_176410877_176411081
ES.21007.5	chr2	+	2420	1	Genic_Genomic	ENSMUSG00000084858.2	novel	NA	NA	NA	NA	2989	1667	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	176043608	176046028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_176043600_176046000
ES.21007.50	chr2	+	177	1	Intergenic	novelGene_17402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176419846	176420023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176419800_176420000
ES.21007.51	chr2	+	491	5	NIC	ENSMUSG00000078877.12	novel	1213	4	NA	NA	-25	407	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	176490379	176500818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
ES.21007.52	chr2	+	5295	6	NNC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	-11	2788	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	30.0293190065975	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	176490393	176505804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702_176501413_176501580
ES.21007.53	chr2	+	5462	5	NIC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	-11	2787	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176490393	176505803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
ES.21007.54	chr2	+	1442	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	-4	-225	-4	225	multi-exon	FALSE	canonical	3	47	junction_2	11.7284080571728	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGACTCATCAGT	NA	False	NA	NA	False	NA	NA	NA	176490400	176500636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
ES.21007.55	chr2	+	5557	5	NIC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	21	2914	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAGGATCAGACAG	NA	False	NA	NA	False	AATAAA	-31	NA	176490425	176505930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
ES.21007.56	chr2	+	5033	5	NIC	ENSMUSG00000078877.12	novel	2505	4	NA	NA	28	2397	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGATGTGTTTGCGTG	NA	False	NA	NA	False	NA	NA	NA	176490432	176505413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
ES.21007.57	chr2	+	10258	3	ISM	ENSMUSG00000078877.12	ENSMUST00000132883.8	2505	4	157	-2784	157	2784	3prime_fragment	FALSE	canonical	3	74	junction_1	7	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	176494182	176505800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176499282_176499487_176499549_176500702
ES.21007.58	chr2	+	176	1	Intergenic	novelGene_17403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATAAACA	NA	False	NA	NA	False	NA	NA	NA	176509261	176509437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176509300_176509400
ES.21007.59	chr2	+	2267	5	NNC	ENSMUSG00000078876.11	novel	408	4	NA	NA	-148	12626	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.0124921972504	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTACTCTTTTTTTT	1764	False	NA	NA	False	TATAAA	-14	NA	176522784	176541149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176522936_176526678_176526806_176526998_176527060_176537157_176537254_176539317
ES.21007.6	chr2	+	3239	2	Intergenic	novelGene_17394	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176044931	176130984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176045117_176127930
ES.21007.60	chr2	+	1516	5	NNC	ENSMUSG00000078876.11	novel	408	4	NA	NA	-102	11921	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.0124921972504	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTGTGCTTCTCAAAACA	1810	False	NA	NA	False	AATAAA	-15	NA	176522830	176540444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176522936_176526678_176526806_176526998_176527060_176537157_176537254_176539317
ES.21007.61	chr2	+	1417	4	NNC	ENSMUSG00000078876.11	novel	408	4	NA	NA	-87	11933	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	3.09120616516523	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACATAACACCTGTTC	1825	False	NA	NA	False	AATAAA	-27	NA	176522845	176540456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176522936_176526678_176526806_176526998_176527060_176539317
ES.21007.62	chr2	+	187	1	Intergenic	novelGene_17404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	176554990	176555177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176555000_176555200
ES.21007.63	chr2	+	4352	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-60	2400	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTGTTTGCGTGTCA	NA	False	NA	NA	False	NA	NA	NA	176692688	176706980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ES.21007.64	chr2	+	4836	6	NNC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-55	2787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.3300890421312	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176692693	176707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176692840_176696293_176696349_176697651_176697754_176701473_176701601_176701806_176701868_176703022
ES.21007.65	chr2	+	5186	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-51	3243	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAGGCAATACTTAGG	NA	False	NA	NA	False	NA	NA	NA	176692697	176707823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ES.21007.66	chr2	+	4726	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-47	2787	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176692701	176707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ES.21007.67	chr2	+	4857	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-45	2920	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATCAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-38	NA	176692703	176707500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
ES.21007.68	chr2	+	3671	4	Fusion	ENSMUSG00000078875.11_ENSMUSG00000078872.10	novel	752	4	NA	NA	-43	2343	multi-exon	FALSE	canonical	0	0	junction_1	72.866697163763	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176692705	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176692812_176776035_176776163_176776368_176776430_176778106
ES.21007.69	chr2	+	8519	5	NNC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-20	2785	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	58.1866608424989	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176692728	176707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176692840_176696293_176696349_176697651_176701601_176701806_176701868_176703022
ES.21007.7	chr2	+	6318	6	Fusion	ENSMUSG00000089951.9_ENSMUSG00000095199.9	novel	643	4	NA	NA	-1	2990	multi-exon	TRUE	non_canonical	0	0	junction_4	25.4055112131207	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	176115385	176228568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176115528_176220781_176220909_176221114_176221176_176222328_176222504_176222587_176223008_176223175
ES.21007.70	chr2	+	1194	4	FSM	ENSMUSG00000078875.11	ENSMUST00000156844.8	752	4	-21	-421	0	-50	multi-exon	FALSE	canonical	3	46	junction_2	49.7482551341139	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACACTGTGAGTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	176692748	176702727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806
ES.21007.71	chr2	+	443	5	Fusion	ENSMUSG00000078875.11_ENSMUSG00000078872.10	novel	683	5	NA	NA	0	33908	multi-exon	FALSE	canonical	3	20	junction_4	17.3835410661925	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCATGACTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	176692748	176813048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176692840_176696293_176696349_176701473_176701601_176776368_176776430_176812939
ES.21007.72	chr2	+	9798	4	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	4	2785	intron_retention	FALSE	canonical	3	63	junction_1	39.293765408777	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176692752	176707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176692840_176696293_176701601_176701806_176701868_176703022
ES.21007.73	chr2	+	945	5	NNC	ENSMUSG00000078875.11	novel	752	4	NA	NA	4	74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.2203238858229	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGAATTTTCACTTGT	NA	False	NA	NA	False	NA	NA	NA	176692752	176702380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176692840_176696293_176696349_176697651_176697754_176701473_176701601_176701806
ES.21007.74	chr2	+	4413	6	NNC	ENSMUSG00000078875.11	novel	683	5	NA	NA	-7	2787	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	55.515763527128	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176692762	176707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022_176703450_176703701
ES.21007.75	chr2	+	5147	1	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	1225	-60	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGTGCAAACACTGT	NA	False	NA	NA	False	NA	NA	NA	176697570	176702717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_176697600_176702700
ES.21007.76	chr2	+	6501	3	ISM	ENSMUSG00000078875.11	ENSMUST00000126358.8	1749	4	1326	-953	1326	953	3prime_fragment	FALSE	canonical	3	117	junction_2	21	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACAAAATGTAAC	NA	False	NA	NA	False	NA	NA	NA	176697671	176705533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176701601_176701806_176701868_176703022
ES.21007.77	chr2	+	4536	2	FSM	ENSMUSG00000078875.11	ENSMUST00000178182.2	192	2	-3398	-946	1730	40	multi-exon	FALSE	canonical	3	159	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTCCCATTTCATATA	NA	False	NA	NA	False	NA	NA	NA	176698075	176702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176701601_176701806
ES.21007.78	chr2	+	4986	1	Genic_Genomic	ENSMUSG00000078875.11	novel	NA	NA	NA	NA	906	2785	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176702379	176707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_176702400_176707400
ES.21007.79	chr2	+	179	1	Intergenic	novelGene_17407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	2478	False	NA	NA	False	NA	NA	NA	176710811	176710990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176710800_176711000
ES.21007.8	chr2	+	478	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-68	717	-1	144	multi-exon	FALSE	canonical	3	22	junction_2	45	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATACGTAATTATTGTT	NA	False	NA	NA	False	NA	NA	NA	176115385	176124162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176115528_176123621_176123749_176123953
ES.21007.80	chr2	+	3571	4	Fusion	ENSMUSG00000083317.2_ENSMUSG00000078872.10	novel	508	4	NA	NA	-8	2227	multi-exon	FALSE	canonical	0	0	junction_1	72.866697163763	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	176724439	176781367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176724562_176776035_176776163_176776368_176776430_176778106
ES.21007.81	chr2	+	4649	12	Fusion	ENSMUSG00000083317.2_ENSMUSG00000094786.2	novel	1209	4	NA	NA	24	2637	multi-exon	TRUE	non_canonical	0	0	junction_1	95.0358783924165	1201	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATGAAGAAGTA	NA	False	NA	105	True	AAAAAG	-10	NA	176724471	177204193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176724562_176749200_176749249_177014853_177014918_177057567_177057700_177060676_177060764_177189903_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246_177200570_177200654_177201191_177201274
ES.21007.82	chr2	+	187	1	Intergenic	novelGene_17409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAATATTTCCTA	NA	False	NA	NA	False	NA	NA	NA	176755950	176756137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_176756000_176756100
ES.21007.83	chr2	+	3883	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-279	-2656	-279	2343	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176765833	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.85	chr2	+	4066	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-250	-2868	-250	2555	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTAAAAAAAGGATG	NA	False	NA	NA	False	AATAAA	-2	NA	176765862	176781695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.86	chr2	+	457	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-117	608	-117	-608	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGACTGTAACCAATGT	NA	False	NA	5	True	NA	NA	NA	176765995	176778219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.87	chr2	+	1970	3	ISM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-112	767	-112	-767	5prime_fragment	FALSE	canonical	3	143	junction_2	82	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATCAAAGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	176766000	176778060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_176766152_176776035_176776163_176776368
ES.21007.88	chr2	+	2013	5	NNC	ENSMUSG00000078872.10	novel	247	3	NA	NA	-108	-814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.3802192527572	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACCAAAATTTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	176766004	176778013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176772059_176772113_176776035_176776163_176776368
ES.21007.89	chr2	+	3746	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-101	2343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.2441075102934	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766011	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776035_176776163_176776368_176776430_176778106
ES.21007.9	chr2	+	6180	5	Fusion	ENSMUSG00000089951.9_ENSMUSG00000095199.9	novel	643	4	NA	NA	5	2987	multi-exon	FALSE	non_canonical	0	0	junction_1	7.36121593216773	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176115391	176228565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_176115528_176123953_176124015_176125167_176125341_176222587_176223008_176223175
ES.21007.90	chr2	+	3584	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-94	-2542	-94	2229	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	176766018	176781369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.91	chr2	+	3615	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-84	2229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.2441075102934	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	176766028	176781369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776035_176776163_176776368_176776430_176778106
ES.21007.92	chr2	+	3189	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-81	-2160	-81	1847	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTGTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	176766031	176780987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.93	chr2	+	432	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-81	33923	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	117.565111982916	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTCCCCAACTTGCTT	NA	False	NA	NA	False	NA	NA	NA	176766031	176813063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176776035_176776163_176776368_176776430_176812939
ES.21007.94	chr2	+	3830	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-76	2343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.1082842501375	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176766036	176781483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176775227_176775378_176776035_176776163_176776368_176776430_176778106
ES.21007.95	chr2	+	3938	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-74	2555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.2441075102934	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTAAAAAAAGGATG	NA	False	NA	NA	False	AATAAA	-2	NA	176766038	176781695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766156_176770403_176770448_176776035_176776163_176776368_176776430_176778106
ES.21007.96	chr2	+	1917	4	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-64	-813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.7679619016137	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAATTTAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	176766048	176778014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176770406_176770448_176776035_176776163_176776368
ES.21007.97	chr2	+	4242	4	FSM	ENSMUSG00000078872.10	ENSMUST00000108970.9	948	4	-64	-3230	-64	2917	multi-exon	FALSE	canonical	3	143	junction_2	72.8666971637631	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	176766048	176782057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_176766152_176776035_176776163_176776368_176776430_176778106
ES.21007.99	chr2	+	505	5	NNC	ENSMUSG00000078872.10	novel	948	4	NA	NA	-61	33915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.1678605417115	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTAATTCCTCCCCA	NA	False	NA	NA	False	NA	NA	NA	176766051	176813055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_176766152_176775445_176775589_176776077_176776163_176776368_176776430_176812939
ES.21008.1	chr2	-	5208	1	Intergenic	novelGene_17397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGAGGATTTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	176162014	176156806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176156800_176162000
ES.21008.2	chr2	-	172	1	Intergenic	novelGene_17398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176158828	176158656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176158700_176158800
ES.21009.1	chr2	-	4538	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	16	2901	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	106.190865897214	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTTTTTTAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	176178550	176162169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
ES.21009.2	chr2	-	4578	6	NNC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	-25	2788	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	100.169855745129	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176178601	176162282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176166377_176167533_176167595_176167799_176167927_176173543_176173646_176174950_176175006_176178462
ES.21009.3	chr2	-	5631	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	-33	-4140	-23	2788	multi-exon	FALSE	canonical	3	26	junction_2	108.739239569818	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176178599	176162282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ES.21009.4	chr2	-	4453	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	-4	2786	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	106.190865897214	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176178580	176162284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
ES.21009.5	chr2	-	2715	6	NNC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	4	954	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	100.169855745129	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACAAAATGTAAC	NA	False	NA	NA	False	NA	NA	NA	176178572	176164116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176166377_176167533_176167595_176167799_176167927_176173543_176173646_176174950_176175006_176178462
ES.21009.6	chr2	-	1402	5	NNC	ENSMUSG00000078881.11	novel	1458	4	NA	NA	4	-164	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	105.14127400788	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTGTTCCCATTTCA	NA	False	NA	NA	False	NA	NA	NA	176178572	176166586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176167595_176167799_176167927_176173543_176173646_176174950_176175006_176178462
ES.2101.1	chr1	-	2037	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	13	-2	13	2	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTCACTGGAGAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	182110356	182103334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182104459_182106540_182107284_182110186
ES.2101.10	chr1	-	1464	4	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	57	-198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	546.378582628891	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGCCTTAGTGGAATT	NA	False	NA	-11	True	NA	NA	NA	182110312	182103534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182103566_182103894_182104459_182106540_182107284_182110186
ES.2101.11	chr1	-	1411	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	21	616	21	-616	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTCATTGCATTAT	NA	False	NA	5	True	AATAAA	-24	NA	182110348	182103952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182104459_182106540_182107284_182110186
ES.2101.12	chr1	-	4048	2	NNC	ENSMUSG00000038633.6	novel	1405	2	NA	NA	50	-622	intron_retention	FALSE	canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAATAATATTCATTG	NA	False	NA	-1	True	AATAAA	-18	NA	182109739	182103958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182107284_182109016
ES.2101.13	chr1	-	3493	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	14	-2102	14	-623	multi-exon	FALSE	canonical	3	1179	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTAATAATATTCATT	NA	False	NA	-2	True	AATAAA	-17	NA	182110355	182103959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182107284_182110186
ES.2101.14	chr1	-	1364	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	61	-20	61	20	multi-exon	FALSE	canonical	3	1179	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTTAAAAATTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	182110308	182106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182107284_182110186
ES.2101.15	chr1	-	4316	1	Genic_Genomic	ENSMUSG00000038633.6	novel	NA	NA	NA	NA	-7	1	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	182110376	182106060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_182106100_182110400
ES.2101.2	chr1	-	1891	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	-35	192	-35	-192	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAGTGGAATTTCTTTG	NA	False	NA	-5	True	NA	NA	NA	182110404	182103528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182104459_182106540_182107284_182110186
ES.2101.3	chr1	-	1203	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	3038	-193	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTAGTGGAATTTCTTT	NA	False	NA	-6	True	NA	NA	NA	182106751	182103529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182104459_182105577_182105641_182106540
ES.2101.4	chr1	-	6827	1	NIC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	12	-194	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTAGTGGAATTTCTT	NA	False	NA	-7	True	NA	NA	NA	182110357	182103530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182103500_182110400
ES.2101.5	chr1	-	1743	3	NIC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	-8	-194	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	557	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTAGTGGAATTTCTT	NA	False	NA	-7	True	NA	NA	NA	182109797	182103530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182104459_182106540_182107284_182109725
ES.2101.6	chr1	-	4030	2	FSM	ENSMUSG00000038633.6	ENSMUST00000133052.2	779	2	-213	-3038	-213	-194	multi-exon	FALSE	canonical	3	24	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTAGTGGAATTTCTT	NA	False	NA	-7	True	NA	NA	NA	182110002	182103530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182107284_182109725
ES.2101.7	chr1	-	2787	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	29	-195	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	584	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCTTAGTGGAATTTCT	NA	False	NA	-8	True	NA	NA	NA	182110340	182103531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182104459_182105577_182107284_182110186
ES.2101.9	chr1	-	3970	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	-38	-2527	-38	-198	multi-exon	FALSE	canonical	3	1179	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGCCTTAGTGGAATT	NA	False	NA	-11	True	NA	NA	NA	182110407	182103534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182107284_182110186
ES.21010.1	chr2	-	4420	5	NIC	ENSMUSG00000078880.11	novel	1628	5	NA	NA	-6	2788	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	110.373230450141	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176328143	176311846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328060
ES.21010.2	chr2	-	4479	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	-63	-2788	-37	2788	multi-exon	FALSE	canonical	2	5	junction_1	103.562481140614	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176328174	176311846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
ES.21010.3	chr2	-	4572	6	NNC	ENSMUSG00000078880.11	novel	1628	5	NA	NA	-28	2788	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	97.8823783936618	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176328165	176311846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176315941_176317097_176317159_176317363_176317491_176323107_176323210_176324514_176324570_176328032
ES.21010.4	chr2	-	910	2	Intergenic	novelGene_17399	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176314230	176311848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176311917_176313388
ES.21010.5	chr2	-	4449	5	NNC	ENSMUSG00000078880.11	novel	1628	5	NA	NA	-16	2786	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	107.827408389518	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176328153	176311848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176315941_176317097_176317159_176317363_176317484_176324514_176324570_176328032
ES.21010.6	chr2	-	2715	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	-19	-1068	6	1068	multi-exon	FALSE	canonical	2	5	junction_1	103.562481140614	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTGAAACCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	176328130	176313566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
ES.21010.7	chr2	-	640	5	Fusion	ENSMUSG00000078880.11_ENSMUSG00000083170.2	novel	1628	5	NA	NA	-8870	153	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACCATGACTGTAAC	NA	False	NA	NA	False	NA	NA	NA	176556211	176315833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176315941_176546938_176547000_176547214_176547342_176552373_176552590_176556082
ES.21010.8	chr2	-	1251	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	-42	249	-41	-249	multi-exon	FALSE	canonical	3	26	junction_2	105.749179140497	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	176328178	176316235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ES.21010.9	chr2	-	3428	1	Genic_Genomic	ENSMUSG00000083170.2	novel	NA	NA	NA	NA	2668	2398	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176544673	176541245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_176541200_176544700
ES.21011.1	chr2	-	2494	1	Intergenic	novelGene_17405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCCAGAATGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	176597221	176594727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176594700_176597200
ES.21012.1	chr2	-	4008	1	Intergenic	novelGene_17406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	176603300	176599292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176599300_176603300
ES.21013.1	chr2	-	3734	4	NIC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	26	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.4743235815666	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGGGATAGACAGAAACA	NA	False	NA	NA	False	AATAAA	-32	NA	176619561	176605835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176609305_176610459_176610521_176610725_176610853_176619484
ES.21013.2	chr2	-	3733	4	NIC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	7.93025150224688	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619573	176605842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176609305_176610725_176610853_176615991_176616047_176619484
ES.21013.3	chr2	-	3823	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	30.886890422961	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619602	176605842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
ES.21013.4	chr2	-	3918	6	NNC	ENSMUSG00000074527.12	novel	2314	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8333173843664	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619623	176605842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176614588_176614691_176615991_176616047_176619512
ES.21013.5	chr2	-	3794	5	NNC	ENSMUSG00000074527.12	novel	3823	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	34.8093019177346	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGTGGGATAGA	NA	False	NA	NA	False	AATAAA	-24	NA	176619602	176605843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619512
ES.21013.6	chr2	-	4327	5	NIC	ENSMUSG00000074527.12	novel	2314	6	NA	NA	-5	-758	intron_retention	FALSE	canonical	2	5	junction_3	12.871965661856	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGGACAGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	176619607	176606600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176610521_176610725_176610853_176614588_176614691_176615991_176616047_176619484
ES.21014.1	chr2	-	3119	1	Intergenic	novelGene_17408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	176739407	176736288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176736300_176739400
ES.21015.1	chr2	-	4658	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	174487	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTATATATATTTAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	177090105	176742778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176743329_176915267_176918442_176918525_176918887_176918971_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.10	chr2	-	4407	3	Fusion	ENSMUSG00000083111.2_ENSMUSG00000081590.2	novel	1958	3	NA	NA	-145	2423	multi-exon	FALSE	canonical	0	0	junction_2	7.5	279	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176864808	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176747091_176748242_176748297_176864660
ES.21015.100	chr2	-	3848	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	1741	multi-exon	FALSE	non_canonical	0	0	junction_1	120.225367077372	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTCTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	177090102	176915524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918887_176918971_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.101	chr2	-	3995	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	1741	multi-exon	FALSE	non_canonical	0	0	junction_1	116.769439669874	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTCTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	177090105	176915524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176937580_176937722_177086489_177086545_177090016
ES.21015.102	chr2	-	1267	3	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-20410	-2156	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	25	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTGTTCCCATTTCA	NA	False	NA	79	True	NA	NA	NA	176941166	176919421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176920428_176920629_176920757_176941032
ES.21015.103	chr2	-	1252	4	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-46	-2235	multi-exon	FALSE	canonical	3	29	junction_2	139.104277432436	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTCTTCCTTTTTTT	NA	False	NA	0	True	NA	NA	NA	177090159	176919500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.104	chr2	-	6511	3	NNC	ENSMUSG00000078867.10	novel	1415	4	NA	NA	7	159410	intron_retention	TRUE	canonical	0	0	junction_1	0	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTGAGTTCTTCCT	NA	False	NA	-6	True	NA	NA	NA	177090105	176919506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176920075_177080662_177086545_177090044
ES.21015.105	chr2	-	1287	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-13	-2241	multi-exon	FALSE	canonical	0	0	junction_4	30.4179223485103	983	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTGAGTTCTTCCT	NA	False	NA	-6	True	NA	NA	NA	177090126	176919506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176920428_176920629_176920757_177085086_177085189_177086489_177086545_177090044
ES.21015.106	chr2	-	1339	6	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-44	-2254	multi-exon	TRUE	non_canonical	0	0	junction_3	30.4144702403313	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATCAGTGTGCAAAGACT	NA	False	NA	-19	True	NA	NA	NA	177090157	176919519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176920428_176920629_176920757_176925417_176925431_177085099_177085189_177086489_177086551_177090016
ES.21015.107	chr2	-	2011	2	Intergenic	novelGene_17420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGTCGTTGCTTCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	176949695	176942186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176942708_176948205
ES.21015.108	chr2	-	255	1	Intergenic	novelGene_17422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGGAATCCAGAACTC	NA	False	NA	NA	False	NA	NA	NA	176949017	176948762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176948800_176949000
ES.21015.109	chr2	-	4051	1	Intergenic	novelGene_17423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCATGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	176953271	176949220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176949200_176953300
ES.21015.110	chr2	-	7098	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5298	5874	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGGTTTAATCAGCTGA	NA	False	NA	NA	False	NA	NA	NA	176964127	176950572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.111	chr2	-	6932	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5311	5695	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACCTGTATTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	176964140	176950751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.112	chr2	-	6770	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5288	5683	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTTTTGCAGAGAACC	NA	False	NA	NA	False	NA	NA	NA	176964117	176950763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176964046
ES.21015.113	chr2	-	6878	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10749	5673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.786064392417	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGACTACTTTT	NA	False	NA	NA	False	NA	NA	NA	176969578	176950773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176969516
ES.21015.114	chr2	-	6897	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-62781	5673	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	209.141631967961	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGACTACTTTT	NA	False	NA	NA	False	NA	NA	NA	177021610	176950773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_177021529
ES.21015.115	chr2	-	9362	1	Genic_Genomic	ENSMUSG00000078869.3	novel	NA	NA	NA	NA	-1306	5673	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGACTACTTTT	NA	False	NA	NA	False	NA	NA	NA	176960135	176950773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_176950800_176960100
ES.21015.116	chr2	-	6799	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10797	5673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	250.5	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGACTACTTTT	NA	False	NA	NA	False	NA	NA	NA	176969626	176950773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176969516
ES.21015.117	chr2	-	5753	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5333	4621	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	176964162	176951825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176964046
ES.21015.118	chr2	-	5872	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5326	4620	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGTCTGTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	176964155	176951826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.119	chr2	-	5911	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5284	4618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.53043855276	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTGTGTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	176964113	176951828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958459_176958604_176958795_176958923_176964046
ES.21015.12	chr2	-	4186	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-44	174380	multi-exon	FALSE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090157	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.120	chr2	-	10505	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5318	4613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.786064392417	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCATATCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	176964147	176951833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176962601_176963076
ES.21015.121	chr2	-	5141	2	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	1773	4613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCATATCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	176957056	176951833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176956832_176956913
ES.21015.122	chr2	-	5844	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10776	4612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.786064392417	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTCATATCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	176969605	176951834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176969516
ES.21015.123	chr2	-	5708	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-62781	4611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.5	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTCTCATATCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	177021610	176951835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_177021529
ES.21015.124	chr2	-	3528	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5312	4611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.441502922054	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTCTCATATCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	176964141	176951835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176952436_176954629_176957402_176958542_176958604_176964046
ES.21015.125	chr2	-	5045	2	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	1696	4610	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTCTCATATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	176957133	176951836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176956764_176957015
ES.21015.126	chr2	-	4862	5	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-54266	4587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	266.374736039287	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATTACATTCAGATTC	NA	False	NA	NA	False	NA	NA	NA	177013095	176951859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176954416_176955346_176957402_176958542_176958604_176958795_176958923_177013032
ES.21015.127	chr2	-	3299	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5312	2061	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	176964141	176954385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.128	chr2	-	4207	3	FSM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	-1453	-1704	-1453	1704	multi-exon	FALSE	canonical	3	501	junction_1	30.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	176960282	176954742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176957402_176958542_176958604_176958795
ES.21015.129	chr2	-	3690	1	Genic_Genomic	ENSMUSG00000078869.3	novel	NA	NA	NA	NA	397	1704	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	NA	False	NA	NA	False	NA	NA	NA	176958432	176954742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_176954700_176958400
ES.21015.13	chr2	-	4273	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	5	174380	multi-exon	FALSE	non_canonical	0	0	junction_1	111.350516388565	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090107	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918429_176918512_176918885_176918970_176919213_176920366_176920428_176920629_176920757_176937580_176937722_177086489_177086545_177090016
ES.21015.130	chr2	-	3482	7	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3_ENSMUSG00000078865.9	novel	1348	4	NA	NA	5	1703	multi-exon	TRUE	non_canonical	0	0	junction_1	446.590198678336	1459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	2342	False	NA	NA	False	NA	NA	NA	177269998	176954743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957209_177007004_177007492_177261875_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
ES.21015.131	chr2	-	2524	2	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	9036	1703	multi-exon	TRUE	non_canonical	0	0	junction_1	0	701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177007064	176954743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957196_177006992
ES.21015.132	chr2	-	2818	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5317	1702	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGTCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	176964146	176954744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176964046
ES.21015.133	chr2	-	2726	2	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	9504	1701	multi-exon	TRUE	non_canonical	0	0	junction_1	0	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCTGTCTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	177006596	176954745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957267_177006391
ES.21015.134	chr2	-	2362	2	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	1635	1698	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTATGTTTCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	176957194	176954748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957016_176957099
ES.21015.135	chr2	-	2153	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5333	1021	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTAGCAGAGATGCTG	NA	False	NA	NA	False	GATAAA	-17	NA	176964162	176955425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176964046
ES.21015.136	chr2	-	2260	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5317	1017	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGATTCTTAGCAGAGAT	NA	False	NA	NA	False	GATAAA	-13	NA	176964146	176955429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.138	chr2	-	2309	5	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	6850	979	multi-exon	FALSE	canonical	0	0	junction_3	257.276602123085	706	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATGTCATGATGTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	177009250	176955467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957402_176958542_176958604_176958795_176958923_177008856_177008918_177009124
ES.21015.139	chr2	-	2213	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10778	979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.786064392417	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATGTCATGATGTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	176969607	176955467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176969516
ES.21015.14	chr2	-	4257	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	25	174380	multi-exon	FALSE	non_canonical	0	0	junction_1	111.350516388565	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090087	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176937580_176937722_177086489_177086545_177090016
ES.21015.140	chr2	-	4962	2	ISM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	-2751	-969	-2751	969	intron_retention	FALSE	canonical	3	501	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTGGAAAACCATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	176961580	176955477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_176957402_176958542
ES.21015.141	chr2	-	1959	3	Fusion	ENSMUSG00000078869.3_ENSMUSG00000078867.10	novel	1050	3	NA	NA	-7	839	multi-exon	FALSE	canonical	0	0	junction_2	250.5	845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCATTTGCATGCTCAG	NA	False	NA	NA	False	NA	NA	NA	177090120	176955607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957402_176958542_176958604_177090016
ES.21015.142	chr2	-	3748	3	FSM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	-1870	-828	-1870	828	multi-exon	FALSE	canonical	3	501	junction_1	30.5	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGATCTAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	176960699	176955618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176957402_176958542_176958604_176958795
ES.21015.143	chr2	-	1905	2	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	9032	828	multi-exon	TRUE	non_canonical	0	0	junction_1	0	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGATCTAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	177007068	176955618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957196_177006740
ES.21015.144	chr2	-	2064	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5311	827	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGGATCTAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	176964140	176955619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.145	chr2	-	294	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5326	-831	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	NA	False	NA	-26	True	NA	NA	NA	176964155	176957277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176964046
ES.21015.146	chr2	-	316	4	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-86	-841	multi-exon	FALSE	canonical	0	0	junction_2	206.259275885689	678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGACTGTAACCAATGTG	NA	False	NA	-36	True	NA	NA	NA	177016186	176957287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957402_176958542_176958604_177012912_177012965_177016097
ES.21015.147	chr2	-	428	5	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-72	-842	multi-exon	FALSE	canonical	0	0	junction_3	219.014268941546	678	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGACTGTAACCAATGT	NA	False	NA	-37	True	NA	NA	NA	177016172	176957288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957402_176958542_176958604_176958795_176958923_177012912_177012965_177016097
ES.21015.148	chr2	-	1420	2	ISM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	-1020	842	-1020	-842	intron_retention	FALSE	canonical	3	501	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGACTGTAACCAATGT	NA	False	NA	-37	True	NA	NA	NA	176959849	176957288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_176957402_176958542
ES.21015.149	chr2	-	415	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5333	-844	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCATGACTGTAACCAAT	NA	False	NA	-39	True	NA	NA	NA	176964162	176957290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
ES.21015.15	chr2	-	5691	4	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-348	174380	intron_retention	TRUE	non_canonical	0	0	junction_1	0	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	6730	False	NA	NA	False	NA	NA	NA	176921104	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176742896_176915254_176918442_176918525_176918887_176918971
ES.21015.150	chr2	-	418	5	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-72	-846	multi-exon	FALSE	non_canonical	0	0	junction_2	213.327213453886	678	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	177016172	176957292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176957402_176958542_176958604_176958801_176958923_177012912_177012965_177016097
ES.21015.151	chr2	-	636	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5533	-846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	251.786064392417	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	176964362	176957292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176957402_176958542_176958604_176958795_176958946_176964046
ES.21015.152	chr2	-	1519	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5298	-846	intron_retention	FALSE	canonical	3	267	junction_2	147.5	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	176964127	176957292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176958604_176958795_176958923_176964046
ES.21015.153	chr2	-	1502	3	FSM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	-1298	846	-1298	-846	multi-exon	FALSE	canonical	3	501	junction_1	30.5	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	176960127	176957292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176957402_176958542_176958604_176958795
ES.21015.154	chr2	-	6040	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5312	-984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	281	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACGTGTGCCAATTT	NA	False	NA	18	True	NA	NA	NA	176964141	176957430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176958604_176958795_176962601_176963079
ES.21015.155	chr2	-	1440	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5363	-990	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_2	147.5	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTTCACGTGTGC	NA	False	NA	12	True	NA	NA	NA	176964192	176957436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176958604_176958795_176958923_176964046
ES.21015.156	chr2	-	2056	8	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5518	-1035	multi-exon	FALSE	non_canonical	0	0	junction_2	192.233382817313	676	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTCATACAGATAA	NA	False	NA	-33	True	NA	NA	NA	177021618	176957481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176958604_176958795_176958923_176992949_176993158_176999280_176999485_177008856_177008918_177009124_177009252_177017944_177018063_177021529
ES.21015.157	chr2	-	6185	2	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5322	-1044	intron_retention	FALSE	non_canonical	0	0	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATTTTAAAAGAATTCA	NA	False	NA	-42	True	NA	NA	NA	176964151	176957490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176962601_176963076
ES.21015.159	chr2	-	2587	2	Intergenic	novelGene_17425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAAGAATTCCATTC	NA	False	NA	NA	False	NA	NA	NA	176964146	176961083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176962601_176963076
ES.21015.16	chr2	-	4162	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-20	174380	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090133	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742899_176915257_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.160	chr2	-	168	1	Intergenic	novelGene_17426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	176974190	176974022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176974000_176974200
ES.21015.161	chr2	-	2625	1	Intergenic	novelGene_17427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGCCGGGCAATGATGG	NA	False	NA	NA	False	CATAAA	-5	NA	176991889	176989264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176989300_176991900
ES.21015.162	chr2	-	5235	9	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5573	17047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1290676557202	432	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGCCGGGCAATGATG	NA	False	NA	NA	False	CATAAA	-4	NA	177021673	176989265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176990532_177004096_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177011140_177011184_177017745_177017791_177017944_177018063_177021529
ES.21015.163	chr2	-	10111	7	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5539	17039	intron_retention	FALSE	canonical	0	0	junction_4	21.5096877398689	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTACTATGCCGGG	NA	False	NA	NA	False	NA	NA	NA	177021639	176989273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176990532_177007618_177007703_177008856_177008918_177009124_177017560_177017745_177017791_177017944_177018063_177021529
ES.21015.164	chr2	-	844	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	13475	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	21.3072757526625	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCATCTGGAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	177016172	176992837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176993158_176999280_176999485_177007618_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.165	chr2	-	878	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-81	13473	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.0036360631601	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCATCTGGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	177016181	176992839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176993158_176999280_176999485_177007618_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.166	chr2	-	9373	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	8036	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.8528824254009	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTTGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	177016172	176998276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.167	chr2	-	1014	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-81	8035	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.5165052924493	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGAGTGTTTTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	177016181	176998277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176998759_176999280_176999485_177007618_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.168	chr2	-	2137	1	Intergenic	novelGene_17428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTATCAAAAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	177001775	176999638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176999600_177001800
ES.21015.169	chr2	-	8051	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5538	6512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.5222112591104	429	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGACCCAACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	177021638	176999800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177021529
ES.21015.17	chr2	-	4128	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	174378	multi-exon	FALSE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090105	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918885_176918970_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.170	chr2	-	7331	3	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	8637	6496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGACTGGCTACATAAAC	NA	False	NA	NA	False	NA	NA	NA	177007463	176999816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076
ES.21015.171	chr2	-	5412	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	4202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1632172028936	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTGTCTGTCTCTGAT	NA	False	NA	NA	False	CATAAA	-12	NA	177016172	177002110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016097
ES.21015.172	chr2	-	5572	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-133	4094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.84754619472471	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTATGCTTAATTCTTGG	NA	False	NA	NA	False	ACTAAA	-18	NA	177016233	177002218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177009124_177009225_177016097
ES.21015.173	chr2	-	4655	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5565	2999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.9137513297147	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGCAGAAACATTCCTT	NA	False	NA	NA	False	AATAAA	-37	NA	177021665	177003313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009220_177017940_177018063_177021529
ES.21015.174	chr2	-	4307	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	2997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8087702430447	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGGCAGAAACATTCC	NA	False	NA	NA	False	AATAAA	-35	NA	177016172	177003315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.175	chr2	-	4478	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-343	2997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGGCAGAAACATTCC	NA	False	NA	NA	False	AATAAA	-35	NA	177016443	177003315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016097
ES.21015.176	chr2	-	4531	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5561	2996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2217570394662	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAGGCAGAAACATTC	NA	False	NA	NA	False	AATAAA	-34	NA	177021661	177003316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177021529
ES.21015.177	chr2	-	4779	8	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5577	2995	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.9742310311234	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGACAGGCAGAAACATT	NA	False	NA	NA	False	AATAAA	-33	NA	177021677	177003317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177011140_177011184_177017745_177017791_177017944_177018063_177021529
ES.21015.178	chr2	-	8306	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	2967	2994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.1430919496424	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGGACAGGCAGAAACAT	NA	False	NA	NA	False	AATAAA	-32	NA	177013133	177003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124
ES.21015.179	chr2	-	4412	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5544	2994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.8824602048746	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGGACAGGCAGAAACAT	NA	False	NA	NA	False	AATAAA	-32	NA	177021644	177003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177021529
ES.21015.180	chr2	-	4568	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5573	2994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.5222112591104	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGGACAGGCAGAAACAT	NA	False	NA	NA	False	AATAAA	-32	NA	177021673	177003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177021529
ES.21015.181	chr2	-	4539	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-139	2994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.2148598915231	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGGACAGGCAGAAACAT	NA	False	NA	NA	False	AATAAA	-32	NA	177016239	177003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.182	chr2	-	4218	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-84	2994	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGGACAGGCAGAAACAT	NA	False	NA	NA	False	AATAAA	-32	NA	177016184	177003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006927_177007092_177007703_177008856_177008918_177016097
ES.21015.183	chr2	-	4806	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5531	2990	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	20.4195984289604	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGATGGACAGGCAGAA	NA	False	NA	NA	False	AATAAA	-28	NA	177021631	177003322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009225_177017745_177017791_177017944_177018063_177021529
ES.21015.184	chr2	-	4680	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5573	2988	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.2320512433443	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACGATGGACAGGCAG	NA	False	NA	NA	False	AATAAA	-26	NA	177021673	177003324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177017944_177018063_177021529
ES.21015.185	chr2	-	4336	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-84	2987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8528824254009	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAACGATGGACAGGCA	NA	False	NA	NA	False	AATAAA	-25	NA	177016184	177003325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.186	chr2	-	4136	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	2987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAACGATGGACAGGCA	NA	False	NA	NA	False	AATAAA	-25	NA	177016172	177003325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177016097
ES.21015.187	chr2	-	4667	7	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5517	2987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1633855724666	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAACGATGGACAGGCA	NA	False	NA	NA	False	AATAAA	-25	NA	177021617	177003325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005501_177005649_177007703_177008856_177008918_177009124_177009252_177017745_177017791_177017944_177018063_177021529
ES.21015.19	chr2	-	4123	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	15	174378	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090097	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742924_176915283_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.190	chr2	-	4139	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-57	2957	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAATGAAGAAGTA	NA	False	NA	NA	False	TATAAA	-28	NA	177016157	177003355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005496_177005644_177006930_177007109_177007703_177008856_177008918_177016097
ES.21015.191	chr2	-	4795	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5543	2940	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	19.8836616346185	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGATTATACAAT	NA	False	NA	NA	False	TATAAA	-11	NA	177021643	177003372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009252_177017745_177017791_177017944_177018063_177021529
ES.21015.192	chr2	-	4084	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-77	2867	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177016177	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006904_177007069_177007703_177008856_177008918_177016097
ES.21015.193	chr2	-	4378	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5536	2867	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.2217570394662	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021636	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005480_177005626_177007703_177008856_177008918_177009124_177009225_177021529
ES.21015.194	chr2	-	4641	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5534	2867	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	17.0953209972788	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021634	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009225_177017944_177018063_177021529
ES.21015.195	chr2	-	4151	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-146	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177016246	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016097
ES.21015.196	chr2	-	4641	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-368	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.2148598915231	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177016468	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.197	chr2	-	4510	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5552	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.867199141236	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021652	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005501_177005649_177007703_177008856_177008918_177009124_177009225_177017944_177018063_177021529
ES.21015.198	chr2	-	8057	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	3089	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.1430919496424	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177013011	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124
ES.21015.2	chr2	-	3999	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	15	174382	multi-exon	TRUE	non_canonical	0	0	junction_1	13.9970842444753	1382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177090097	176742883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742892_176915250_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176937155_176937209_176941032_176941040_177090023
ES.21015.20	chr2	-	2453	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	0	174378	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090113	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742927_176916966_176918442_176918525_176918835_176918922_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.200	chr2	-	4393	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5552	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2217570394662	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021652	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177021529
ES.21015.201	chr2	-	4742	7	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5510	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8083805260747	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021610	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177011136_177011184_177017745_177018063_177021529
ES.21015.202	chr2	-	4431	3	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5542	2867	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	28	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021642	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177021529
ES.21015.203	chr2	-	4441	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5573	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.5222112591104	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177021673	177003445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177021529
ES.21015.205	chr2	-	4023	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-81	2865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177016181	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177016097
ES.21015.206	chr2	-	3723	3	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	8698	2865	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177007402	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006986_177007069
ES.21015.207	chr2	-	4577	7	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5544	2865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6623770450792	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177021644	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005499_177005644_177007703_177008856_177008918_177009124_177009252_177011136_177011184_177017944_177018063_177021529
ES.21015.208	chr2	-	4427	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-129	2865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5101720123294	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177016229	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.209	chr2	-	4175	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	2865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8087702430447	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177016172	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.21	chr2	-	5280	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	174378	intron_retention	FALSE	non_canonical	0	0	junction_1	123.390639839495	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090102	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742899_176915257_176918442_176918525_176918887_176918971_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.210	chr2	-	4566	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-127	2865	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.1430919496424	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177016227	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009245_177016097
ES.21015.211	chr2	-	4684	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5552	2865	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	17.8465682975747	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177021652	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009252_177017944_177018063_177021529
ES.21015.212	chr2	-	4104	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5577	2865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177021677	177003447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177017745_177017791_177021618
ES.21015.213	chr2	-	4618	8	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5547	2864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.9742310311234	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177021647	177003448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177011140_177011184_177017745_177017791_177017944_177018063_177021529
ES.21015.215	chr2	-	4075	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	2864	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177016172	177003448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006927_177007093_177007703_177008856_177008918_177016097
ES.21015.216	chr2	-	4174	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-84	2864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1147367097487	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177016184	177003448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016009
ES.21015.217	chr2	-	4474	7	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-1963	2864	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.2017266595791	424	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177018063	177003448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009225_177011140_177011184_177017745_177017791_177017944
ES.21015.218	chr2	-	4788	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5544	2864	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	21.7678662252413	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177021644	177003448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009225_177011043_177011184_177017944_177018063_177021529
ES.21015.219	chr2	-	3948	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-59	2751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCATCGGCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	177016159	177003561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016097
ES.21015.22	chr2	-	4309	8	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-48912	174378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3062749759323	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176969668	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176937580_176937746_176969512
ES.21015.220	chr2	-	4256	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-74	2749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5101720123294	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCATCGGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	177016174	177003563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.221	chr2	-	3793	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-82	2473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8087702430447	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177016182	177003839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.222	chr2	-	3683	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-72	2473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1632172028936	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177016172	177003839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177016097
ES.21015.223	chr2	-	3822	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-84	2473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8528824254009	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177016184	177003839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.224	chr2	-	4033	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-127	2473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5101720123294	423	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTGATGTGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	177016227	177003839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124_177009252_177016097
ES.21015.225	chr2	-	3643	6	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-57	2348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8087702430447	423	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGCTTTGGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	177016157	177003964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177006909_177007076_177007703_177008856_177008918_177009124_177009225_177016097
ES.21015.226	chr2	-	4216	4	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	5445	1382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.1430919496424	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	177010655	177004930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177005497_177005644_177007703_177008856_177008918_177009124
ES.21015.227	chr2	-	3222	5	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5573	1382	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	17.8465682975747	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	177021673	177004930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177007703_177008856_177008918_177009124_177009252_177017944_177018063_177021529
ES.21015.228	chr2	-	1045	1	NIC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	7237	-1506	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGATTGCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	177008863	177007818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177007800_177008900
ES.21015.229	chr2	-	414	3	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078867.10	novel	1581	4	NA	NA	-161187	-2395	multi-exon	FALSE	canonical	3	14	junction_1	34	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATATGAAATTATTGTT	NA	False	NA	NA	False	NA	NA	NA	177251300	177008707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177008918_177081219_177081347_177251223
ES.21015.23	chr2	-	4108	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-23	174378	multi-exon	FALSE	non_canonical	0	0	junction_1	28.6065260619554	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090136	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177090016
ES.21015.230	chr2	-	4414	2	NNC	ENSMUSG00000078868.4	novel	1581	4	NA	NA	-5515	-7422	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGATCTTTTTCAAATC	NA	False	NA	NA	False	AAGAAA	-1	NA	177021615	177013734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177018063_177021529
ES.21015.231	chr2	-	4573	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-46	3264	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTGTTTGGATTTGA	NA	False	NA	NA	False	NA	NA	NA	177090159	177075652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.232	chr2	-	4303	7	FSM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	-20	-3695	-20	2918	multi-exon	FALSE	canonical	3	26	junction_4	128.500324253806	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	177090133	177075998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177085086_177085189_177086489_177086545_177090016
ES.21015.233	chr2	-	4053	7	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161166	2918	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	89.4644560084556	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	177251279	177075998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079513_177079596_177079803_177080953_177081015_177081219_177081347_177086401_177086480_177090005_177090024_177251230
ES.21015.234	chr2	-	4174	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	5	2917	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGGAGGGTCAGACAGA	NA	False	NA	NA	False	AATAAA	-21	NA	177090107	177075999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.235	chr2	-	4016	7	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161244	2803	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	89.4644560084556	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	177251357	177076113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079501_177079584_177079803_177080953_177081015_177081219_177081347_177086401_177086480_177090005_177090024_177251230
ES.21015.236	chr2	-	4057	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	7	2802	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090105	177076114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.237	chr2	-	4022	7	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161255	2802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.4644560084556	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177251368	177076114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079513_177079596_177079803_177080953_177081015_177081219_177081347_177086401_177086463_177089992_177090024_177251230
ES.21015.238	chr2	-	4022	7	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161251	2802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.4644560084556	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177251364	177076114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079513_177079596_177079803_177080953_177081015_177081219_177081347_177086401_177086480_177090005_177090024_177251230
ES.21015.239	chr2	-	5421	4	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	0	2802	intron_retention	FALSE	canonical	3	197	junction_2	60.5144610816291	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090113	177076114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.24	chr2	-	4120	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	16	174378	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177090096	176742887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918994_176919078_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.240	chr2	-	544	4	NNC	ENSMUSG00000078867.10	novel	1077	4	NA	NA	-161255	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.54725113532	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAGGACTT	NA	False	NA	NA	False	NA	NA	NA	177251368	177079678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079803_177080953_177081015_177081219_177081347_177251136
ES.21015.241	chr2	-	450	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	5	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	128.388083559184	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	177090107	177079686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177086489_177086545_177090016
ES.21015.242	chr2	-	531	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-39	6	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTGTAACCAATGTGG	NA	False	NA	NA	False	NA	NA	NA	177090152	177079687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.243	chr2	-	420	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_4	115.882483577114	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177090102	177079693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177090016
ES.21015.244	chr2	-	366	4	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.54725113532	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177251388	177079693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177079803_177080953_177081015_177081219_177081347_177251319
ES.21015.245	chr2	-	1619	3	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161194	0	intron_retention	FALSE	canonical	0	0	junction_2	25.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177251307	177079693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177081015_177081219_177081347_177251136
ES.21015.246	chr2	-	1487	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	5	40	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	110.628601636286	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTTCACATGTGC	NA	False	NA	NA	False	NA	NA	NA	177090107	177079837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
ES.21015.247	chr2	-	1535	3	NNC	ENSMUSG00000078867.10	novel	1415	4	NA	NA	-161255	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAAATTTCACATGTG	NA	False	NA	NA	False	NA	NA	NA	177251368	177079838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177081015_177081219_177081347_177251136
ES.21015.248	chr2	-	1565	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-34	13	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	135.257162472085	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	177090147	177079864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081015_177081219_177081347_177085086_177085189_177086489_177086545_177090016
ES.21015.249	chr2	-	1488	4	FSM	ENSMUSG00000078867.10	ENSMUST00000108955.2	1415	4	-61	-12	-60	12	multi-exon	FALSE	canonical	3	44	junction_2	139.800651723167	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTCATCAGTATA	NA	False	NA	NA	False	NA	NA	NA	177090173	177079865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177081015_177081219_177081347_177086489_177086545_177090016
ES.21015.250	chr2	-	1404	3	NIC	ENSMUSG00000078867.10	novel	1415	4	NA	NA	-32	11	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	10.5	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGACTCATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	177090145	177079866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081015_177081219_177081347_177090016
ES.21015.251	chr2	-	5428	3	ISM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	4330	189	709	-5	intron_retention	FALSE	canonical	3	51	junction_1	118	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATATAGATAA	30	False	NA	NA	False	NA	NA	NA	177085783	177079882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_177081015_177081219_177081347_177081614
ES.21015.252	chr2	-	1558	1	NIC	ENSMUSG00000078867.10	novel	1077	4	NA	NA	5052	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATTCATATAGATAA	4373	False	NA	NA	False	NA	NA	NA	177081440	177079882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177079900_177081400
ES.21015.253	chr2	-	9736	2	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	13	-218	intron_retention	FALSE	canonical	3	287	junction_1	0	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGATTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	177090099	177080095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081347_177081614
ES.21015.254	chr2	-	1321	5	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-32	-229	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	135.257162472085	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGTGCAAACACTGT	NA	False	NA	NA	False	NA	NA	NA	177090145	177080106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177081015_177081219_177081347_177085086_177085189_177086489_177086545_177090016
ES.21015.255	chr2	-	469	3	NNC	ENSMUSG00000078867.10	novel	1415	4	NA	NA	-145632	-927	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_2	18.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTAATTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	177235745	177080804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177081015_177081219_177081347_177235613
ES.21015.256	chr2	-	2465	5	Antisense	novelGene_ENSMUSG00000078866.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAGTTACAGAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	177168892	177156554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_177156640_177165076_177165203_177165407_177165470_177166616_177167982_177168065
ES.21015.257	chr2	-	4203	1	Intergenic	novelGene_17433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	177222075	177217872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177217900_177222100
ES.21015.258	chr2	-	175	2	Intergenic	novelGene_17434	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	685	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATTAGGG	NA	False	NA	NA	False	NA	NA	NA	177280072	177223874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177224032_177280054
ES.21015.259	chr2	-	5230	1	FSM	ENSMUSG00000085513.2	ENSMUST00000132460.2	877	1	-2265	-2088	-2265	2088	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	177236615	177231385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177231400_177236600
ES.21015.26	chr2	-	4225	4	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-8547	2420	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	11.8415464455544	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGTTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	176757178	176742888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176746517_176746685_176747091_176748242_176748304_176757047
ES.21015.260	chr2	-	2975	2	Genic_Genomic	ENSMUSG00000085513.2	novel	877	1	NA	NA	-16967	1979	multi-exon	FALSE	canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTCCTGGTCTTG	NA	False	NA	-4	True	NA	NA	NA	177251317	177231494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_177234376_177251223
ES.21015.261	chr2	-	3761	1	Intergenic	novelGene_17435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTAGGTCGTTGCTTCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	177256134	177252373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177252400_177256100
ES.21015.262	chr2	-	247	1	Intergenic	novelGene_17436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGAATCCAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	177253692	177253445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177253400_177253700
ES.21015.263	chr2	-	5120	1	Intergenic	novelGene_17437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGACTACTTTT	NA	False	NA	NA	False	NA	NA	NA	177260412	177255292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177255300_177260400
ES.21015.264	chr2	-	933	1	Intergenic	novelGene_17438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTACATGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	177257099	177256166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177256200_177257100
ES.21015.265	chr2	-	6026	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-26	-4652	-15	4652	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCTGTCTGTCAT	2322	False	NA	NA	False	NA	NA	NA	177270018	177256344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
ES.21015.266	chr2	-	6124	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3034	4649	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTGTGTCTGTCTGT	5382	False	NA	NA	False	NA	NA	NA	177266958	177256347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
ES.21015.267	chr2	-	3020	5	NNC	ENSMUSG00000078865.9	novel	531	4	NA	NA	-31	4649	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	530.704484623976	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTGTGTCTGTCTGT	2306	False	NA	NA	False	NA	NA	NA	177270034	177256347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177258935_177259862_177259996_177263226_177263288_177263479_177263607_177269922
ES.21015.268	chr2	-	7404	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3815	4649	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	497.394813000699	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTGTGTCTGTCTGT	6163	False	NA	NA	False	NA	NA	NA	177266177	177256347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177258935_177259862_177261349_177261430_177261788_177261871_177262087_177263226_177263288_177263479
ES.21015.269	chr2	-	5958	3	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-19	4641	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	386.5	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTCTCATATCTGTGT	2318	False	NA	NA	False	NA	NA	NA	177270022	177256355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263479_177263607_177269922
ES.21015.27	chr2	-	4233	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	174377	multi-exon	FALSE	non_canonical	0	0	junction_1	108.879233557185	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGTTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177090105	176742888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742899_176915257_176918429_176918512_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177085086_177085189_177086489_177086545_177090016
ES.21015.270	chr2	-	5309	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-239	4639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	440.954858800762	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCTCTCATATCTGT	2098	False	NA	NA	False	NA	NA	NA	177270242	177256357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177258935_177259862_177262087_177263226_177263288_177263479_177263607_177269922
ES.21015.271	chr2	-	4593	7	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3087	4639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.497956695919	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCTCTCATATCTGT	5435	False	NA	NA	False	NA	NA	NA	177266905	177256357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177258935_177259862_177259996_177260242_177261349_177261430_177261788_177261871_177262087_177263226_177263288_177266761
ES.21015.272	chr2	-	191	1	Intergenic	novelGene_17439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATAAGTGCTCCTA	NA	False	NA	NA	False	NA	NA	NA	177257074	177256883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177256900_177257100
ES.21015.273	chr2	-	3501	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	5	2092	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGTTGGGGAGGA	2342	False	NA	NA	False	NA	NA	NA	177269998	177258904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
ES.21015.275	chr2	-	3053	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	2982	1737	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	302.45366954663	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	5330	False	NA	NA	False	NA	NA	NA	177267010	177259259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177266761
ES.21015.276	chr2	-	3129	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3034	1737	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	437.731652956466	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTCTGTCCATCCT	5382	False	NA	NA	False	NA	NA	NA	177266958	177259259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261642_177261724_177262087_177263226_177263288_177263479_177263607_177266761
ES.21015.278	chr2	-	2949	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5539	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.32631030423	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275542	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177275396
ES.21015.279	chr2	-	2092	2	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	8304	1736	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177261688	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261259_177261594
ES.21015.280	chr2	-	3077	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-10	1736	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	426.04131255079	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	2327	False	NA	NA	False	NA	NA	NA	177270013	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261602_177261684_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
ES.21015.281	chr2	-	3082	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5545	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	513.469327224129	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275548	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177263479_177263607_177275396
ES.21015.282	chr2	-	3083	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5491	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	475.137706354695	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275494	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ES.21015.283	chr2	-	3145	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	5	1736	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	2342	False	NA	NA	False	NA	NA	NA	177269998	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
ES.21015.284	chr2	-	3007	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3031	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	507.739290876725	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	5379	False	NA	NA	False	NA	NA	NA	177266961	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177263479_177263607_177266884
ES.21015.285	chr2	-	2853	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5484	1736	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	513.469327224129	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275487	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261563_177261814_177262087_177263226_177263288_177263479_177263607_177275396
ES.21015.286	chr2	-	3082	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5490	1736	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	475.137706354695	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275493	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261434_177261517_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ES.21015.287	chr2	-	3000	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5507	1736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.35702260395516	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGTCTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	177275510	177259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263143_177263288_177275396
ES.21015.289	chr2	-	2918	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5511	1735	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	324.32631030423	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGTCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	177275514	177259261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261618_177261703_177262087_177263226_177263288_177275396
ES.21015.29	chr2	-	4539	4	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-8652	2420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.07106781186548	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGTTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	176757283	176742888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176747091_176748242_176748304_176748516_176748644_176757134
ES.21015.290	chr2	-	3297	7	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5511	1735	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	474.517883985654	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGTCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	177275514	177259261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177267138_177267334_177275396
ES.21015.291	chr2	-	3007	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5474	1735	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	513.469327224129	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGTCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	177275477	177259261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261642_177261728_177262087_177263226_177263288_177263479_177263607_177275396
ES.21015.292	chr2	-	3087	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5538	1735	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	494.377993037716	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGTCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	177275541	177259261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177263479_177263565_177266761_177266817_177275396
ES.21015.294	chr2	-	2300	2	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	8262	1734	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCTGTCTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	177261730	177259262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261449_177261616
ES.21015.295	chr2	-	2938	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5475	1734	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	285.906890438128	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCTGTCTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	177275478	177259262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261444_177261527_177262087_177263226_177263288_177266761_177266817_177275396
ES.21015.296	chr2	-	4409	3	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	6045	1734	intron_retention	FALSE	non_canonical	0	0	junction_1	611	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCTGTCTGTCCAT	8393	False	NA	NA	False	NA	NA	NA	177263947	177259262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177263288_177263479
ES.21015.297	chr2	-	2918	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5507	1671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.4558441227157	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATAAGCCCCTATC	NA	False	NA	NA	False	AATATA	-17	NA	177275510	177259325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263479_177263607_177275396
ES.21015.298	chr2	-	2269	6	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3079	1005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	475.137706354695	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTGGAAAACCATGTCA	5427	False	NA	NA	False	ATTAAA	-17	NA	177266913	177259991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261349_177261430_177261788_177261871_177262087_177263226_177263288_177263479_177263607_177266761
ES.21015.299	chr2	-	2219	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3079	874	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	437.731652956466	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGCATGCTCAGT	5427	False	NA	NA	False	NA	NA	NA	177266913	177260122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261616_177261700_177262087_177263226_177263288_177263479_177263607_177266761
ES.21015.3	chr2	-	4119	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	19	174380	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090093	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918429_176918512_176918887_176918971_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.30	chr2	-	3646	4	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-8655	1731	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.8415464455544	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	176757286	176743577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176746480_176746646_176747091_176748242_176748304_176757047
ES.21015.300	chr2	-	2235	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-24	-863	-13	863	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGATCTAAAGCATTT	2324	False	NA	NA	False	NA	NA	NA	177270016	177260133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
ES.21015.301	chr2	-	2152	7	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5516	862	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	477.901896022837	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGATCTAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	177275519	177260134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261349_177261430_177261788_177261871_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ES.21015.302	chr2	-	5973	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	2579	862	intron_retention	FALSE	non_canonical	0	0	junction_1	324.32631030423	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGGATCTAAAGCATT	4927	False	NA	NA	False	NA	NA	NA	177267413	177260134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261349_177261430_177261788_177261871_177262087_177263226
ES.21015.303	chr2	-	2125	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	3034	861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	302.45366954663	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGGATCTAAAGCAT	5382	False	NA	NA	False	NA	NA	NA	177266958	177260135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177261595_177261678_177262087_177263226_177263288_177266761
ES.21015.304	chr2	-	419	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-37	966	-26	-966	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	2311	False	NA	NA	False	NA	NA	NA	177270029	177261962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
ES.21015.305	chr2	-	485	5	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5511	-966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	437.731652956466	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	177275514	177261962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177275396
ES.21015.306	chr2	-	2662	4	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	881	-966	combination_of_known_junctions	FALSE	canonical	3	688	junction_1	232.759293882949	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	3229	False	NA	NA	False	NA	NA	NA	177269111	177261962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761
ES.21015.307	chr2	-	280	3	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-14	-966	combination_of_known_splicesites	FALSE	canonical	3	155	junction_2	266.5	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	2323	False	NA	NA	False	NA	NA	NA	177270017	177261962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177269922
ES.21015.308	chr2	-	457	4	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-5539	-967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	500.198182945742	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAATGTGGTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	177275542	177261963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177262087_177263226_177263288_177263479_177263607_177275396
ES.21015.309	chr2	-	554	5	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	-114	-974	combination_of_known_junctions	FALSE	canonical	3	253	junction_4	344.203700590217	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	2223	False	NA	NA	False	NA	NA	NA	177270117	177261970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177262087_177263226_177263288_177263479_177263607_177266761_177266817_177269922
ES.21015.31	chr2	-	3626	4	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-8553	1731	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.6707311029399	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	176757184	176743577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176746517_176746684_176747091_176748159_176748304_176757047
ES.21015.310	chr2	-	2475	2	NNC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	4193	-981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	6541	False	NA	NA	False	NA	NA	NA	177265799	177261977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177262125_177263471
ES.21015.312	chr2	-	865	4	NNC	ENSMUSG00000078865.9	novel	531	4	NA	NA	-5526	888	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	554.608771016911	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	177275529	177262131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177262676_177263226_177263288_177263479_177263607_177275396
ES.21015.313	chr2	-	1502	4	NNC	ENSMUSG00000078865.9	novel	531	4	NA	NA	-5558	887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	505.350043699085	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	177275561	177262132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177263288_177263479_177263607_177266761_177266817_177275396
ES.21015.314	chr2	-	1362	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-26	1152	-15	871	5prime_fragment	FALSE	canonical	3	827	junction_2	197.5	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	2322	False	NA	NA	False	NA	NA	NA	177270018	177262148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_177263288_177263479_177263607_177269922
ES.21015.315	chr2	-	1354	3	NNC	ENSMUSG00000078865.9	novel	531	4	NA	NA	-5588	853	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	608	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTCATACAGATAA	NA	False	NA	NA	False	NA	NA	NA	177275591	177262166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177263288_177263479_177263607_177275485
ES.21015.316	chr2	-	1250	3	ISM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	-64	1302	-53	721	5prime_fragment	FALSE	canonical	3	827	junction_2	197.5	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTACTGTTCCCATTT	2284	False	NA	NA	False	NA	NA	NA	177270056	177262298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_177263288_177263479_177263607_177269922
ES.21015.317	chr2	-	3477	1	Genic_Genomic	ENSMUSG00000078865.9	novel	NA	NA	NA	NA	-41	-3548	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAATAATAAA	2296	False	NA	NA	False	NA	NA	NA	177270044	177266567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_177266600_177270000
ES.21015.32	chr2	-	3635	4	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-8648	1728	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.8415464455544	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	176757279	176743580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176746498_176746665_176747091_176748242_176748304_176757047
ES.21015.33	chr2	-	3647	3	NNC	ENSMUSG00000083111.2	novel	1958	3	NA	NA	-4767	1728	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4.5	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	176753398	176743580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176747091_176748242_176748304_176753322
ES.21015.34	chr2	-	177	1	Intergenic	novelGene_17410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCACATAATTATAAACA	NA	False	NA	NA	False	NA	NA	NA	176762699	176762522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176762500_176762700
ES.21015.35	chr2	-	158	1	Intergenic	novelGene_17411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	176764841	176764683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176764700_176764800
ES.21015.36	chr2	-	174	1	Intergenic	novelGene_17412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAATATATAAT	NA	False	NA	NA	False	NA	NA	NA	176767082	176766908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176766900_176767100
ES.21015.37	chr2	-	2779	1	Intergenic	novelGene_17414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	176787333	176784554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176784600_176787300
ES.21015.38	chr2	-	3155	1	Intergenic	novelGene_17415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTAGGTCGTTTCTTTCTG	NA	False	NA	0	True	AATAAA	-21	NA	176805851	176802696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176802700_176805900
ES.21015.39	chr2	-	622	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5325	153745	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	214.097070403954	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTTAGGTCGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	176964154	176802701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176803028_176958542_176958604_176958795_176958923_176964046
ES.21015.4	chr2	-	5277	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	18	174380	intron_retention	FALSE	non_canonical	0	0	junction_1	123.390639839495	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090094	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.40	chr2	-	533	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5363	153745	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	13	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATTTAGGTCGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	176964192	176802701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176803028_176958542_176958604_176964046
ES.21015.41	chr2	-	3486	3	Genic_Genomic	ENSMUSG00000082765.4	novel	914	3	NA	NA	-144653	9641	multi-exon	FALSE	canonical	0	0	junction_1	46.5	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATCAAACTTCCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	176964155	176807614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_176809943_176818454_176819504_176964046
ES.21015.42	chr2	-	2746	3	NNC	ENSMUSG00000082765.4	novel	914	3	NA	NA	-1678	1842	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	35	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	176821180	176815413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176817983_176819124_176819186_176821064
ES.21015.43	chr2	-	404	5	Fusion	ENSMUSG00000078868.4_ENSMUSG00000078869.3_ENSMUSG00000082765.4	novel	914	3	NA	NA	-37	-603	multi-exon	FALSE	canonical	0	0	junction_3	221.109701279704	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATGTGGTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	177016137	176817858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176817983_176958542_176958604_176958795_176958923_177012912_177012965_177016097
ES.21015.44	chr2	-	2502	1	NIC	ENSMUSG00000078870.10	novel	685	3	NA	NA	9805	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTGTTTTCAAATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	176877749	176875247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176875200_176877700
ES.21015.45	chr2	-	179	1	Intergenic	novelGene_17416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCACATAATTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	176878536	176878357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176878400_176878500
ES.21015.46	chr2	-	4830	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-5	3633	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATACTTAGGGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	176898219	176881516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
ES.21015.47	chr2	-	4547	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	4	3304	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATCAGACAGAAACATT	NA	False	NA	NA	False	AATAAA	-38	NA	176898210	176881845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.48	chr2	-	4487	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-11	3284	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTTTTTTAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	176898225	176881865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
ES.21015.49	chr2	-	4482	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-64	3171	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176898278	176881978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.5	chr2	-	8495	5	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-163760	174380	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1381	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	1297	False	NA	NA	False	NA	NA	NA	177084516	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176923708_177084318
ES.21015.50	chr2	-	4440	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-77	3171	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176898291	176881978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
ES.21015.51	chr2	-	4419	5	NNC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-29	3171	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	128.906943179954	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176898243	176881978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898160
ES.21015.52	chr2	-	4416	5	NNC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-5	3171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	132.035033229821	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176898219	176881978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176886072_176887228_176887290_176887494_176887615_176894619_176894675_176898132
ES.21015.53	chr2	-	5782	3	ISM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	3249	-4661	-343	3169	3prime_fragment	FALSE	canonical	3	86	junction_2	120	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176894965	176881980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_176887290_176887494_176887622_176894619
ES.21015.54	chr2	-	5583	3	ISM	ENSMUSG00000078870.10	ENSMUST00000133301.8	1113	4	5697	-3169	-1371	3169	3prime_fragment	FALSE	canonical	2	8	junction_1	159	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	176888925	176881980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_176886072_176887228_176887290_176887494
ES.21015.55	chr2	-	3777	6	NNC	ENSMUSG00000078867.10	novel	588	7	NA	NA	-161190	196936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.6	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177251303	176881980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176882112_177076248_177079501_177079668_177079803_177081219_177081347_177247349_177247403_177251223
ES.21015.56	chr2	-	4037	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-60	2785	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTGTTTGCGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	176898274	176882364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
ES.21015.57	chr2	-	4061	5	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-38	2776	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTACTAGTGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	176898252	176882373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.58	chr2	-	3825	3	NIC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-16	1460	intron_retention	FALSE	canonical	3	20	junction_2	153	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTCAGATTTCCCA	NA	False	NA	NA	False	NA	NA	NA	176898230	176883689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176887290_176887494_176887622_176898132
ES.21015.59	chr2	-	1691	5	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71391	-467	intron_retention	FALSE	non_canonical	0	0	junction_1	133.450365304858	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAACAATGTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	176969605	176885616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176885748_176886000_176887290_176887494_176887622_176894619_176894675_176969516
ES.21015.6	chr2	-	5427	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	174380	intron_retention	FALSE	non_canonical	0	0	junction_1	24.4731996273475	1382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090105	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176920428_176920629_176920757_176925737_176925879_176937155_176937209_176941032_176941040_177090023
ES.21015.60	chr2	-	453	6	NNC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-71391	692	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	123.980643650531	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCAATGTGGTAAGGAC	NA	False	NA	NA	False	NA	NA	NA	176969605	176885949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176937155_176937189_176969550
ES.21015.61	chr2	-	436	5	NIC	ENSMUSG00000078870.10	novel	912	4	NA	NA	5	686	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	176898209	176885955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.62	chr2	-	454	5	NNC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	-71404	679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.943169584484	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	176969618	176885962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176969516
ES.21015.63	chr2	-	1483	4	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71420	535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	137.950071483208	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATTTCACGTGTGC	NA	False	NA	NA	False	NA	NA	NA	176969634	176886106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176887290_176887494_176887622_176894619_176894675_176969516
ES.21015.64	chr2	-	1427	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-7	-508	-7	508	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	False	NA	NA	False	NA	NA	NA	176898221	176886133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.66	chr2	-	1215	4	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71412	275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	137.950071483208	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	176969626	176886366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176887290_176887494_176887622_176894619_176894675_176969516
ES.21015.67	chr2	-	1190	4	FSM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-6	-272	-6	272	multi-exon	FALSE	canonical	3	79	junction_3	114.822568435923	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACACTGTGAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	176898220	176886369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_176887290_176887494_176887622_176894619_176894675_176898132
ES.21015.68	chr2	-	3177	5	Fusion	ENSMUSG00000078870.10_ENSMUSG00000078869.3	novel	1050	3	NA	NA	-10776	197	multi-exon	FALSE	non_canonical	0	0	junction_1	216.939363648002	796	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	176969605	176886444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176887290_176920629_176920757_176955346_176957402_176958542_176958604_176969516
ES.21015.69	chr2	-	486	5	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71391	-432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.577923680228	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACTGTTGTTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	176969605	176887073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176887290_176887494_176887622_176894619_176894675_176937155_176937189_176969550
ES.21015.7	chr2	-	4123	8	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-165866	174380	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	27.3062749759323	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177086622	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176925294_176925376_177086570
ES.21015.70	chr2	-	418	4	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71390	-500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	137.950071483208	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCACTGCTTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	176969604	176887141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176887290_176887494_176887622_176894619_176894675_176969516
ES.21015.71	chr2	-	2886	2	ISM	ENSMUSG00000078870.10	ENSMUST00000108964.2	912	4	-7	5236	-7	-5236	5prime_fragment	FALSE	canonical	3	79	junction_1	0	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	176898221	176891877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_176894675_176898132
ES.21015.72	chr2	-	3088	1	NIC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-343	-5236	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	176894965	176891877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_176891900_176895000
ES.21015.73	chr2	-	2544	2	NNC	ENSMUSG00000078870.10	novel	912	4	NA	NA	-71449	-5636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATTAAGAATTTCATT	NA	False	NA	NA	False	NA	NA	NA	176969663	176892277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176894675_176969516
ES.21015.74	chr2	-	6016	1	Intergenic	novelGene_17417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTCTGCTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	176907982	176901966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176902000_176908000
ES.21015.75	chr2	-	10380	4	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-48869	12508	intron_retention	FALSE	non_canonical	0	0	junction_1	34.8839345385363	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAAGGATCCTTGCAG	NA	False	NA	NA	False	NA	NA	NA	176969625	176904757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176913485_176919014_176920428_176920629_176920757_176969512
ES.21015.76	chr2	-	6438	1	Intergenic	novelGene_17418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTCACTAGGGATTGA	NA	False	NA	NA	False	NA	NA	NA	176912023	176905585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_176905600_176912000
ES.21015.77	chr2	-	3082	1	Genic_Genomic	ENSMUSG00000083817.2	novel	NA	NA	NA	NA	2667	2258	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGAATCCTTCTTGCTG	9745	False	NA	NA	False	NA	NA	NA	176918089	176915007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_176915000_176918100
ES.21015.78	chr2	-	4301	3	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	1142	2117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	8220	False	NA	NA	False	NA	NA	NA	176919614	176915148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176918451_176918533_176918976_176919057
ES.21015.79	chr2	-	5406	6	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-14	2117	intron_retention	FALSE	non_canonical	0	0	junction_1	130.146993818528	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	177090127	176915148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.8	chr2	-	4131	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	174380	multi-exon	TRUE	non_canonical	0	0	junction_1	114.873666188877	1382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090102	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176743105_176915463_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.80	chr2	-	4368	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	2117	multi-exon	FALSE	non_canonical	0	0	junction_1	116.769439669874	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	177090102	176915148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176937580_176937722_177086489_177086545_177090016
ES.21015.81	chr2	-	4134	6	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	1415	4	NA	NA	-23	2117	multi-exon	FALSE	non_canonical	0	0	junction_1	135.583774840502	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	177090136	176915148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_177080953_177081015_177086489_177086545_177090016
ES.21015.82	chr2	-	7688	3	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-2246	2117	intron_retention	FALSE	non_canonical	0	0	junction_1	0	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	4832	False	NA	NA	False	NA	NA	NA	176923002	176915148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176918442_176918525_176918976_176919057
ES.21015.84	chr2	-	4309	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	6	2094	multi-exon	FALSE	non_canonical	0	0	junction_1	25.8139376112983	1030	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177090106	176915171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176925417_176925521_176937155_176937209_176941032_176941040_177090023
ES.21015.85	chr2	-	3402	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	19	2021	multi-exon	FALSE	non_canonical	0	0	junction_1	27.2666870415572	1030	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCCTGGTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	177090093	176915244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918226_176920366_176920428_176920629_176920757_176925417_176925521_176937155_176937209_176941032_176941040_177090023
ES.21015.86	chr2	-	4167	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-25	2021	multi-exon	FALSE	non_canonical	0	0	junction_1	120.225367077372	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCCTGGTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	177090138	176915244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.87	chr2	-	4131	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	2021	multi-exon	FALSE	non_canonical	0	0	junction_1	120.225367077372	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCCTGGTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	177090102	176915244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918429_176918512_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.88	chr2	-	4189	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	52	2019	multi-exon	FALSE	non_canonical	0	0	junction_1	113.464729753167	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090060	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918429_176918512_176918976_176919057_176919213_176920366_176920428_176920629_176920757_177085086_177085189_177086489_177086545_177090016
ES.21015.9	chr2	-	4235	10	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	7	174380	multi-exon	FALSE	non_canonical	0	0	junction_1	24.782510758722	1382	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090105	176742885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176742896_176915254_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176925417_176925521_176937155_176937209_176941032_176941040_177090023
ES.21015.90	chr2	-	1312	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	14	2019	multi-exon	TRUE	canonical	0	0	junction_1	136.657189712067	1030	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090098	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176916234_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.91	chr2	-	5247	9	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-38	2019	multi-exon	TRUE	non_canonical	0	0	junction_1	26.1043578737344	1030	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090151	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366_176920428_176920629_176920757_176925737_176926228_176936574_176937209_176941032_176941040_177090023
ES.21015.92	chr2	-	5424	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	8	2019	intron_retention	FALSE	non_canonical	0	0	junction_1	125.625988111095	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090104	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918887_176918971_176920428_176920629_176920757_176937579_176937722_177086489_177086545_177090016
ES.21015.93	chr2	-	4236	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	0	2019	multi-exon	TRUE	non_canonical	0	0	junction_1	113.464729753167	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090113	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918823_176918910_176919213_176920366_176920428_176920629_176920757_177085086_177085189_177086489_177086545_177090016
ES.21015.94	chr2	-	4126	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	10	2019	multi-exon	FALSE	non_canonical	0	0	junction_1	120.225367077372	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCCTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	177090102	176915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918887_176918971_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.95	chr2	-	4121	7	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	18	2018	multi-exon	TRUE	non_canonical	0	0	junction_1	120.225367077372	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTCCTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	177090094	176915247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918998_176919078_176919213_176920366_176920428_176920629_176920757_177086489_177086545_177090016
ES.21015.96	chr2	-	5379	8	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	14	2018	intron_retention	FALSE	non_canonical	0	0	junction_1	25.6610560172096	1030	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTCCTGGTCTTG	NA	False	NA	NA	False	NA	NA	NA	177090098	176915247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176920428_176920629_176920757_176925417_176925521_176937155_176937209_176941032_176941040_177090023
ES.21015.97	chr2	-	4281	4	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-93	2017	intron_retention	FALSE	non_canonical	0	0	junction_1	18.8561808316413	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTGCTTCCTGGTCTT	6985	False	NA	NA	False	NA	NA	NA	176920849	176915248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176918442_176918525_176918976_176919057_176919213_176920366
ES.21015.98	chr2	-	4333	4	NNC	ENSMUSG00000083817.2	novel	2135	3	NA	NA	-20370	2017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.24345659257	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTGCTTCCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	176941126	176915248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_176919213_176920366_176920428_176920629_176920757_176940945
ES.21015.99	chr2	-	5030	6	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	-13	1742	intron_retention	FALSE	non_canonical	0	0	junction_1	130.146993818528	1030	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTCTTTCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	177090126	176915523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_176918442_176918525_176918976_176919057_176920428_176920629_176920757_177086489_177086545_177090016
ES.21016.1	chr2	-	4293	1	Intergenic	novelGene_17444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGTAGTACATATTTAA	NA	False	NA	NA	False	NA	NA	NA	177298782	177294489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177294500_177298800
ES.21017.1	chr2	-	2541	2	Intergenic	novelGene_17446	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTGGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	177432463	177429040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177431045_177431926
ES.21017.2	chr2	-	2882	2	Intergenic	novelGene_17447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTGTTTGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	177433311	177429042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177429493_177430879
ES.21018.1	chr2	-	1563	1	Intergenic	novelGene_17448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTGGTCATTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	177456182	177454619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177454600_177456200
ES.21019.1	chr2	-	8546	5	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	0	7688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.044521650043	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTACATTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	177482111	177465895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177466607_177467324_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.10	chr2	-	4695	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-315	-2804	-297	2804	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTCATGATGTTTG	NA	False	NA	0	True	NA	NA	NA	177482426	177470779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.100	chr2	-	5279	2	Intergenic	novelGene_17455	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTTCACCAGTAATT	NA	False	NA	NA	False	AAGAAA	-4	NA	177614535	177606351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177608169_177611073
ES.21019.101	chr2	-	4357	4	NNC	ENSMUSG00000078861.9	novel	1372	3	NA	NA	-7	16549	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	39.4743235815666	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTTTTGGGCCACCA	NA	False	NA	NA	False	AATAAA	-18	NA	177720255	177692938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177697003_177711347_177711409_177711615_177711743_177720150
ES.21019.102	chr2	-	565	3	NNC	ENSMUSG00000078861.9	novel	1572	2	NA	NA	1	12805	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	48	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCACCTGGAAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	177720268	177696682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177697003_177711615_177711743_177720150
ES.21019.103	chr2	-	9718	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-17	-8329	-17	7534	multi-exon	FALSE	canonical	3	51	junction_1	29	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGAGTGTTTTGCCT	NA	False	NA	1	True	ATTAAA	-19	NA	177720286	177701953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711409_177711615_177711743_177720150
ES.21019.104	chr2	-	8572	4	FSM	ENSMUSG00000078861.9	ENSMUST00000108924.9	962	4	-78	-7532	-27	7532	multi-exon	FALSE	canonical	3	15	junction_1	38.724095283887	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTGAGTGTTTTGC	NA	False	NA	-1	True	ATTAAA	-17	NA	177720296	177701955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177710194_177711347_177711409_177711615_177711743_177720150
ES.21019.105	chr2	-	789	4	NNC	ENSMUSG00000078861.9	novel	1372	3	NA	NA	-5	7530	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	43.3384612350534	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGTCTGAGTGTTTT	NA	False	NA	-3	True	ATTAAA	-15	NA	177720274	177701957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177702435_177711347_177711409_177711615_177711743_177720150
ES.21019.106	chr2	-	3902	4	FSM	ENSMUSG00000078861.9	ENSMUST00000108924.9	962	4	-82	-2858	-31	2858	multi-exon	FALSE	canonical	3	15	junction_1	38.724095283887	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGAGGGATAGACA	NA	False	NA	NA	False	NA	NA	NA	177720300	177706629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177710194_177711347_177711409_177711615_177711743_177720150
ES.21019.107	chr2	-	5215	2	FSM	ENSMUSG00000078861.9	ENSMUST00000123265.2	1572	2	-13	-3630	8	2849	multi-exon	FALSE	canonical	3	109	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTTAAAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	177720261	177706638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711743_177720150
ES.21019.108	chr2	-	4903	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	1	-3532	1	2737	multi-exon	FALSE	canonical	3	51	junction_1	29	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCATGGTCATAATGTT	NA	False	NA	1	True	NA	NA	NA	177720268	177706750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711409_177711615_177711743_177720150
ES.21019.109	chr2	-	3655	3	FSM	ENSMUSG00000078861.9	ENSMUST00000131702.8	704	3	-21	-2930	9	2733	multi-exon	FALSE	canonical	2	4	junction_1	52.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGCTTCATGGTCATAA	NA	False	NA	-3	True	NA	NA	NA	177720239	177706754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177710194_177711615_177711743_177720150
ES.21019.11	chr2	-	4404	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1576	4	NA	NA	-20	2800	multi-exon	FALSE	canonical	3	248	junction_1	248.393952332893	972	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177599110	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177599000
ES.21019.110	chr2	-	3764	4	FSM	ENSMUSG00000078861.9	ENSMUST00000108924.9	962	4	-69	-2733	-18	2733	multi-exon	FALSE	canonical	3	15	junction_1	38.724095283887	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGCTTCATGGTCATAA	NA	False	NA	-3	True	NA	NA	NA	177720287	177706754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177710194_177711347_177711409_177711615_177711743_177720150
ES.21019.111	chr2	-	1593	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	-198	-23	184	multi-exon	FALSE	canonical	3	51	junction_1	29	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177720292	177710084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711409_177711615_177711743_177720150
ES.21019.112	chr2	-	1392	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-23	3	-23	-3	multi-exon	FALSE	canonical	3	51	junction_1	29	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAAATTTTAAAAGAAT	NA	False	NA	-17	True	NA	NA	NA	177720292	177710285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711409_177711615_177711743_177720150
ES.21019.113	chr2	-	1269	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	-24	127	-24	-127	multi-exon	FALSE	canonical	3	51	junction_1	29	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAATCAGTACTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	177720293	177710409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177711409_177711615_177711743_177720150
ES.21019.12	chr2	-	4328	3	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	5	2800	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	355.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482124	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177474890_177476312_177476440_177482029
ES.21019.13	chr2	-	5590	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-42	-5238	-42	2800	multi-exon	FALSE	canonical	3	312	junction_1	213.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482171	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.14	chr2	-	4390	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-1486	2800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.554408656457	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177483615	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177483519
ES.21019.15	chr2	-	4280	3	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-4	2800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	369.5	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482115	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476351_177476440_177482029
ES.21019.16	chr2	-	4466	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-7	2800	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	299.067810965265	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482118	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177475960_177476105_177476312_177476440_177482029
ES.21019.17	chr2	-	4353	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	2800	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	129.471575602095	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482116	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177482057
ES.21019.18	chr2	-	4396	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000074529.11	novel	1576	4	NA	NA	-47	2800	multi-exon	FALSE	canonical	1	9	junction_3	130.395126016615	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177567453	177470783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177567351
ES.21019.19	chr2	-	4492	5	Fusion	ENSMUSG00000095362.8_ENSMUSG00000074529.11_ENSMUSG00000081574.2	novel	1576	4	NA	NA	-60	2798	multi-exon	FALSE	canonical	0	0	junction_3	141.816783209887	826	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177567466	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476398_177497169_177497297_177567351
ES.21019.2	chr2	-	5277	1	Intergenic	novelGene_17450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	177472391	177467114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177467100_177472400
ES.21019.20	chr2	-	7274	1	Genic_Genomic	ENSMUSG00000095362.8	novel	NA	NA	NA	NA	-1620	2798	mono-exon	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177478059	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_177470800_177478100
ES.21019.22	chr2	-	4596	3	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	4	2798	intron_retention	FALSE	canonical	3	248	junction_1	245.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177482125	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177474890_177476043_177476440_177482029
ES.21019.23	chr2	-	4387	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-320	2798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.554408656457	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177482449	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177482354
ES.21019.25	chr2	-	4522	5	Fusion	ENSMUSG00000095362.8_ENSMUSG00000074529.11_ENSMUSG00000081574.2	novel	1576	4	NA	NA	-48	2798	multi-exon	FALSE	canonical	0	0	junction_4	140.836784967564	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177567454	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177497169_177497297_177567351
ES.21019.26	chr2	-	5561	3	Fusion	ENSMUSG00000095362.8_ENSMUSG00000074529.11	novel	1494	3	NA	NA	-60	2798	intron_retention	FALSE	canonical	1	9	junction_2	151.5	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177567466	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177567351
ES.21019.27	chr2	-	4356	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	387	2798	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	133.62967069064	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	-6	True	NA	NA	NA	177481724	177470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177481660
ES.21019.28	chr2	-	4350	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-1	2797	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	129.471575602095	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	-7	True	NA	NA	NA	177482130	177470786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476398_177482029
ES.21019.3	chr2	-	6598	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	4031	intron_retention	TRUE	non_canonical	0	0	junction_1	302.910694576618	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATGCATAATTCTTGGA	NA	False	NA	NA	False	ACTAAA	-19	NA	177482116	177469552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474084_177474251_177476105_177476312_177476440_177482029
ES.21019.30	chr2	-	4383	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-1546	2796	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.554408656457	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	177477985	177470787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177477892
ES.21019.31	chr2	-	4068	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-1285	2796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.554408656457	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	-8	True	NA	NA	NA	177477724	177470787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177473279_177474785_177474890_177476043_177476105_177476312
ES.21019.32	chr2	-	5642	3	NNC	ENSMUSG00000095362.8	novel	310	3	NA	NA	5	2793	intron_retention	FALSE	canonical	0	0	junction_2	156	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAACTTGCTTCTTGGT	NA	False	NA	-11	True	NA	NA	NA	177482106	177470790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177476105_177476312_177476529_177481994
ES.21019.33	chr2	-	5524	3	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1494	3	NA	NA	-3	2792	intron_retention	FALSE	canonical	3	312	junction_1	246	972	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAACTTGCTTCTTGG	NA	False	NA	-12	True	NA	NA	NA	177599084	177470791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177599000
ES.21019.34	chr2	-	4291	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-20	-2695	-2	2695	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTCCTGCTTCTTGAC	NA	False	NA	-109	True	NA	NA	NA	177482131	177470888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.35	chr2	-	4147	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-158	-2413	-140	2413	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTGTTTGCGTGTCA	NA	False	NA	NA	False	NA	NA	NA	177482269	177471170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.36	chr2	-	5156	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	3	-4849	3	2411	multi-exon	FALSE	canonical	3	312	junction_1	213.5	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	177482126	177471172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.37	chr2	-	4159	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-33	2408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.554408656457	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	177482162	177471175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476529_177481994
ES.21019.38	chr2	-	3620	2	NNC	ENSMUSG00000095362.8	novel	1494	3	NA	NA	1475	2407	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTAGTGATGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	177474964	177471176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474348_177474515
ES.21019.39	chr2	-	3975	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1576	4	NA	NA	2	2402	multi-exon	FALSE	canonical	3	248	junction_1	248.393952332893	969	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTACTAGTGATGTG	NA	False	NA	NA	False	NA	NA	NA	177599079	177471181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177599000
ES.21019.4	chr2	-	4898	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-54	-3268	-36	3268	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGGGCCTGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177482165	177470315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.40	chr2	-	3870	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1576	4	NA	NA	-86	2287	multi-exon	FALSE	canonical	0	0	junction_3	134.554408656457	965	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGATTTTAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	177595563	177471296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177595474
ES.21019.41	chr2	-	3862	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1576	4	NA	NA	0	2287	multi-exon	FALSE	canonical	3	248	junction_1	248.393952332893	965	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGATTTTAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	177599081	177471296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177474890_177476043_177476105_177476312_177476440_177599000
ES.21019.42	chr2	-	4490	1	Genic_Genomic	ENSMUSG00000095362.8	novel	NA	NA	NA	NA	649	2283	mono-exon	FALSE	NA	NA	NA	NA	NA	787	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTGGATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	177475790	177471300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_177471300_177475800
ES.21019.43	chr2	-	3864	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-5	-2283	-5	2283	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTTTGGATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	177482116	177471300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.44	chr2	-	3857	3	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-42	2282	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	355.5	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGCTTTGGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	177482171	177471301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177474890_177476312_177476440_177482029
ES.21019.45	chr2	-	4331	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-11	-4010	-11	1572	multi-exon	FALSE	canonical	3	312	junction_1	213.5	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTACTTTGTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	177482140	177472011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.46	chr2	-	3208	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-60	-1572	-42	1572	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTACTTTGTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	177482171	177472011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.47	chr2	-	4046	3	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	1494	3	NA	NA	4	1312	intron_retention	FALSE	canonical	3	312	junction_1	246	938	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	-3	True	NA	NA	NA	177599086	177472271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177599000
ES.21019.48	chr2	-	2960	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-73	-1311	-55	1311	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	-4	True	NA	NA	NA	177482184	177472272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.49	chr2	-	4093	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-34	-3749	-34	1311	multi-exon	FALSE	canonical	3	312	junction_1	213.5	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTGGTCATGATGT	NA	False	NA	-4	True	NA	NA	NA	177482163	177472272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.5	chr2	-	4569	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-60	-2933	-42	2933	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGATCAGACAGAAACAT	NA	False	NA	NA	False	AATAAA	-38	NA	177482171	177470650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.50	chr2	-	2053	5	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	1309	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	266.044521650043	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	-6	True	NA	NA	NA	177482116	177472274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177473025_177473861_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.51	chr2	-	3009	3	NNC	ENSMUSG00000095362.8	novel	1494	3	NA	NA	-1026	1309	intron_retention	FALSE	non_canonical	0	0	junction_1	156	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	-6	True	NA	NA	NA	177477465	177472274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177472471_177474444_177476105_177476312
ES.21019.52	chr2	-	4016	3	NNC	ENSMUSG00000095362.8	novel	310	3	NA	NA	-5	1309	intron_retention	FALSE	canonical	3	11	junction_2	150.5	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	-6	True	NA	NA	NA	177482116	177472274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177476105_177476312_177476440_177482057
ES.21019.53	chr2	-	2673	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-18	-1079	0	1079	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTCCCAAATCTTCA	NA	False	NA	NA	False	AATAAA	-29	NA	177482129	177472504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.54	chr2	-	2541	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	3	-968	3	968	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTGAGTGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	177482108	177472615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.55	chr2	-	1681	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-46	-1325	-46	-1113	multi-exon	FALSE	canonical	3	312	junction_1	213.5	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGACTGTAAACA	NA	False	NA	NA	False	NA	NA	NA	177482175	177474696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.56	chr2	-	411	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-22	1187	-4	-1187	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAACCAATGTGGTAAG	NA	False	NA	NA	False	NA	NA	NA	177482133	177474770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ES.21019.58	chr2	-	1334	3	NNC	ENSMUSG00000095362.8	novel	310	3	NA	NA	-36	1016	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	150.5	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAGATTGCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	177482165	177475005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177476105_177476312_177476440_177482057
ES.21019.59	chr2	-	1271	3	NNC	ENSMUSG00000095362.8	novel	310	3	NA	NA	-2	1016	at_least_one_novel_splicesite	FALSE	canonical	1	57	junction_1	341	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAGATTGCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	177482113	177475005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177476105_177476351_177476440_177482029
ES.21019.6	chr2	-	5690	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-14	-5366	-14	2928	multi-exon	FALSE	canonical	3	312	junction_1	213.5	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAGGATCAGACAGA	NA	False	NA	NA	False	AATAAA	-33	NA	177482143	177470655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.60	chr2	-	1309	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	310	3	NA	NA	3	1012	multi-exon	TRUE	non_canonical	0	0	junction_3	302.910694576618	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAACATTAGATTGCTCT	NA	False	NA	NA	False	NA	NA	NA	177599087	177475009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177482029_177482072_177599042
ES.21019.61	chr2	-	3642	1	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-2228	996	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	662	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGTAATATTACGTT	NA	False	NA	NA	False	NA	NA	NA	177478667	177475025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177475000_177478700
ES.21019.63	chr2	-	1132	4	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	310	3	NA	NA	3	835	multi-exon	TRUE	non_canonical	0	0	junction_3	302.910694576618	825	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACACTGGGAGTTCTTC	NA	False	NA	71	True	NA	NA	NA	177599087	177475186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177482029_177482060_177599030
ES.21019.64	chr2	-	1117	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-46	-761	-46	761	multi-exon	FALSE	canonical	3	312	junction_1	213.5	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGCATTTGTTCATA	NA	False	NA	-3	True	NA	NA	NA	177482175	177475260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.66	chr2	-	1048	3	NNC	ENSMUSG00000095362.8	novel	310	3	NA	NA	-20	760	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	150.5	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGCATTTGTTCAT	NA	False	NA	-4	True	NA	NA	NA	177482149	177475261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177476105_177476312_177476398_177482029
ES.21019.67	chr2	-	1056	3	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	310	3	NA	NA	3	759	multi-exon	FALSE	canonical	3	312	junction_1	246	825	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	-5	True	NA	NA	NA	177599087	177475262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177599000
ES.21019.68	chr2	-	1690	1	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-513	759	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	661	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTGCATTTGTTCA	NA	False	NA	-5	True	NA	NA	NA	177476952	177475262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177475300_177477000
ES.21019.69	chr2	-	853	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-53	-490	-53	490	multi-exon	FALSE	canonical	3	312	junction_1	213.5	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGAATTTTCACTTGT	NA	False	NA	-14	True	NA	NA	NA	177482182	177475531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.7	chr2	-	4620	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-1495	2913	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	134.554408656457	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTTTTTTGAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	177477934	177470670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177477721
ES.21019.70	chr2	-	482	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	-37	-135	-37	135	multi-exon	FALSE	canonical	3	312	junction_1	213.5	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTGTTTGCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	177482166	177475886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177476105_177476312_177476440_177482029
ES.21019.71	chr2	-	433	3	Fusion	ENSMUSG00000095362.8_ENSMUSG00000078862.11	novel	310	3	NA	NA	-7	126	multi-exon	FALSE	canonical	3	312	junction_1	246	813	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATATGAAATTATTGTT	NA	False	NA	NA	False	NA	NA	NA	177599097	177475895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177476105_177476312_177476440_177599000
ES.21019.72	chr2	-	3874	3	Fusion	ENSMUSG00000074529.11_ENSMUSG00000081574.2	novel	2024	3	NA	NA	-55	1801	multi-exon	FALSE	canonical	0	0	junction_2	1	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	177567461	177492143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177495781_177497169_177497297_177567351
ES.21019.73	chr2	-	3913	3	Fusion	ENSMUSG00000074529.11_ENSMUSG00000081574.2	novel	561	3	NA	NA	-28	340	intron_retention	FALSE	canonical	0	0	junction_1	2	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAACCCTGACTAA	NA	False	NA	NA	False	NA	NA	NA	177567434	177493604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177497297_177545382_177545521_177567351
ES.21019.74	chr2	-	1607	1	Antisense	novelGene_ENSMUSG00000074521.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTTGCAATGCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	177540106	177538499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_177538500_177540100
ES.21019.75	chr2	-	921	4	NIC	ENSMUSG00000074529.11	novel	561	3	NA	NA	-35	255	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	2.49443825784929	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAATAAAAGTAACTCAAA	NA	False	NA	NA	False	AATAAA	-21	NA	177567441	177544877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177545521_177563227_177563289_177563481_177563609_177567351
ES.21019.76	chr2	-	851	3	FSM	ENSMUSG00000074529.11	ENSMUST00000108934.9	561	3	-43	-247	-34	247	multi-exon	FALSE	canonical	3	10	junction_1	2	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTGACTCCAATAAAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	177567440	177544885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177545521_177563481_177563609_177567351
ES.21019.77	chr2	-	4010	1	Antisense	novelGene_ENSMUSG00000074521.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTATTGTACCCTATTG	NA	False	NA	NA	False	NA	NA	NA	177550578	177546568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_177546600_177550600
ES.21019.78	chr2	-	186	1	Intergenic	novelGene_17454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATTATAAAAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	177581084	177580898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_177580900_177581100
ES.21019.8	chr2	-	4457	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	2904	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	129.471575602095	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAATTAATTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	177482116	177470679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476312_177476440_177482057
ES.21019.80	chr2	-	10106	3	NIC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	-43	2932	intron_retention	FALSE	canonical	3	28	junction_1	9	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGGATCAGACAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	177599133	177584397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177588804_177589962_177595530_177599000
ES.21019.81	chr2	-	4733	6	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	1	2919	multi-exon	TRUE	non_canonical	0	0	junction_5	15.3362316101447	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTTTTTAAAAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	177720247	177584410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000_177599025_177720174
ES.21019.82	chr2	-	4712	5	NNC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	-52	2880	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	15.5161206491829	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATTAGACAATA	NA	False	NA	NA	False	NA	NA	NA	177599142	177584449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177588804_177589962_177590024_177590229_177590330_177595474_177595530_177599000
ES.21019.83	chr2	-	4621	6	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	0	2806	multi-exon	TRUE	non_canonical	0	0	junction_5	15.3362316101447	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177720248	177584523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000_177599031_177720180
ES.21019.85	chr2	-	4559	4	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	1	2806	multi-exon	FALSE	canonical	3	25	junction_2	5.8878405775519	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177720247	177584523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177590229_177590357_177595474_177595530_177720150
ES.21019.86	chr2	-	4748	5	NNC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	-52	2806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1373130916139	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177599142	177584523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177588804_177589879_177590024_177590229_177590357_177595474_177595530_177599000
ES.21019.87	chr2	-	5769	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	-55	-4947	3	2806	multi-exon	FALSE	canonical	3	25	junction_2	8.5764535535124	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177599087	177584523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
ES.21019.88	chr2	-	4618	6	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	1	2804	multi-exon	FALSE	non_canonical	0	0	junction_5	15.3362316101447	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177720247	177584525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000_177599025_177720174
ES.21019.89	chr2	-	4495	4	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	8	2804	multi-exon	TRUE	non_canonical	0	0	junction_3	37.5085175512028	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177720240	177584525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177590229_177590357_177599000_177599048_177720197
ES.21019.9	chr2	-	4416	4	NNC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	-5	2874	at_least_one_novel_splicesite	FALSE	canonical	1	57	junction_2	287.264106123036	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATTAGACAATA	NA	False	NA	70	True	NA	NA	NA	177482116	177470709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177474890_177476043_177476105_177476351_177476440_177482029
ES.21019.90	chr2	-	4605	4	NIC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	-49	2804	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	27.5358352374178	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177599139	177584525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177588804_177589962_177590024_177590229_177590357_177599000
ES.21019.92	chr2	-	4639	6	Fusion	ENSMUSG00000078861.9_ENSMUSG00000078862.11	novel	1807	5	NA	NA	3	2803	multi-exon	FALSE	non_canonical	0	0	junction_3	18.8467503830236	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	177720245	177584526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_-_177588804_177589962_177590024_177590229_177590381_177595474_177595530_177599000_177599031_177720180
ES.21019.93	chr2	-	4627	5	NNC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	-46	2802	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.8189466535728	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	177599136	177584527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599028
ES.21019.94	chr2	-	5032	2	ISM	ENSMUSG00000078862.11	ENSMUST00000178829.8	1665	4	4756	-2799	4756	2799	intron_retention	FALSE	canonical	3	28	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAACTTGCTTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	177590721	177584530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_177588804_177589962
ES.21019.95	chr2	-	4280	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-56	-2417	-56	2417	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGATGTGTTTGCGTGT	NA	False	NA	NA	False	NA	NA	NA	177599146	177584912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
ES.21019.96	chr2	-	4152	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	-52	-2293	-52	2293	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGATTTTAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	177599142	177585036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
ES.21019.97	chr2	-	410	5	NNC	ENSMUSG00000078862.11	novel	1807	5	NA	NA	3	775	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.8189466535728	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCATGACTGTAACC	NA	False	NA	NA	False	NA	NA	NA	177599087	177588695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599028
ES.21019.98	chr2	-	1283	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	-57	-459	1	459	multi-exon	FALSE	canonical	3	25	junction_2	8.5764535535124	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTTCCCATTTCATA	NA	False	NA	NA	False	NA	NA	NA	177599089	177589011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
ES.21019.99	chr2	-	1175	3	NIC	ENSMUSG00000078862.11	novel	767	4	NA	NA	-46	359	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	27	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATCATTGTGCAAACACT	NA	False	NA	NA	False	NA	NA	NA	177599136	177589111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177590024_177590229_177590357_177599000
ES.2102.1	chr1	-	638	1	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCCAGCGTGGGCTA	NA	False	NA	NA	False	NA	NA	NA	182117758	182117120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182117100_182117800
ES.21020.1	chr2	+	2298	13	FSM	ENSMUSG00000027525.19	ENSMUST00000108916.8	2656	13	-69	427	-69	-8	multi-exon	FALSE	canonical	0	0	junction_1	1.70579079087156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAATAAAGGCTTTCA	1629	False	NA	NA	False	ATTAAA	-17	NA	177760902	177977857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_177761096_177897905_177898068_177901970_177902049_177911109_177911293_177920689_177920900_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ES.21020.2	chr2	+	2337	13	NNC	ENSMUSG00000027525.19	novel	1668	5	NA	NA	45944	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.70579079087156	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGAATAAAGGCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	177880820	177977856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_177881054_177897905_177898068_177901970_177902049_177911109_177911293_177920689_177920900_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ES.21021.1	chr2	-	12899	31	NIC	ENSMUSG00000060445.12	novel	5717	44	NA	NA	7435	364	intron_retention	FALSE	canonical	0	0	junction_6	1.23648246606609	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGTTGTTCTGTCATT	NA	False	NA	NA	False	AATAGA	-14	NA	178041780	177986721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177988201_177989215_177989273_177989365_177989448_177989568_177991921_177992623_177992780_177994244_177994431_177996709_177996916_177998232_177998432_177999887_178000065_178000501_178000540_178002098_178002262_178004732_178004785_178005208_178005265_178006490_178006549_178006634_178006700_178010266_178010304_178011060_178011189_178016147_178016567_178016706_178016838_178019431_178019493_178019812_178019883_178021192_178021342_178022646_178022747_178023631_178023758_178024125_178024201_178025258_178025408_178031245_178031307_178033483_178033580_178034135_178034182_178035768_178035822_178035908
ES.21021.2	chr2	-	4627	43	NIC	ENSMUSG00000060445.12	novel	5717	44	NA	NA	21	-138	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_10	1.32651316925563	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCATCATCTAAGCACCT	NA	False	NA	NA	False	AATAAA	-25	NA	178049457	177988049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_177988201_177989215_177989273_177989365_177989448_177989568_177989628_177990014_177990115_177990213_177990309_177991810_177991921_177992623_177992780_177993374_177993466_177994244_177994431_177996709_177996916_177998232_177998432_177999887_178000065_178000501_178000540_178002098_178002262_178004732_178004785_178005208_178005265_178006490_178006549_178006634_178006700_178010266_178010304_178011060_178011189_178016147_178016567_178016706_178016838_178019431_178019493_178019812_178019883_178021192_178021342_178022646_178022747_178023631_178023758_178024125_178024201_178025258_178025408_178031245_178031307_178033483_178033580_178034135_178034182_178035768_178035822_178035908_178036052_178036741_178036777_178037013_178037100_178037630_178037717_178043413_178043439_178044506_178044636_178045450_178045595_178046440_178046500_178049339
ES.21022.1	chr2	-	3132	1	FSM	ENSMUSG00000049999.5	ENSMUST00000058678.5	3267	1	132	3	132	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTGTGTGCTGTGGC	NA	False	NA	NA	False	ATTAAA	-27	NA	178056133	178053001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_178053000_178056100
ES.21023.1	chr2	+	2221	4	FSM	ENSMUSG00000070476.11	ENSMUST00000094251.11	4541	4	49	2271	-9	1867	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	178056365	178063950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_178056502_178058424_178058537_178059298_178059385_178062063
ES.21024.1	chr2	-	4972	1	Intergenic	novelGene_17460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGTTTGCTACATCTG	NA	False	NA	NA	False	AGTAAA	-22	NA	178276043	178271071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_178271100_178276000
ES.21025.1	chr2	+	1688	1	FSM	ENSMUSG00000061897.6	ENSMUST00000118761.2	456	1	-187	-1045	-187	1045	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAATGTTCCCAATTAC	NA	False	NA	NA	False	ATTAAA	-41	NA	178819030	178820718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_178819000_178820700
ES.21026.1	chr2	+	4720	1	Intergenic	novelGene_17461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTTCCTGCCTAACT	NA	False	NA	NA	False	NA	NA	NA	179051754	179056474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179051800_179056500
ES.21027.1	chr2	+	3206	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	-1	-2468	-1	2468	multi-exon	FALSE	canonical	3	53	junction_2	6	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTCTTAGCTGCATTT	NA	False	NA	11	True	NA	NA	NA	179056727	179061143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179056894_179057552_179057714_179058264
ES.21027.2	chr2	+	4411	1	Genic_Genomic	ENSMUSG00000039138.2	novel	NA	NA	NA	NA	0	2464	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCCTGTCTTAGCTGC	NA	False	NA	7	True	NA	NA	NA	179056728	179061139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_179056700_179061100
ES.21027.3	chr2	+	2132	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	9	2465	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCTGTCTTAGCTGCA	NA	False	NA	8	True	NA	NA	NA	179056737	179061140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179056894_179057552_179057714_179059325
ES.21027.4	chr2	+	1667	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	18	2009	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	179056746	179060684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179056894_179057552_179057714_179059325
ES.21027.5	chr2	+	718	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	19	0	19	0	multi-exon	FALSE	canonical	3	53	junction_2	6	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTGGTAATGACCCT	NA	False	NA	7	True	AATAAA	-22	NA	179056747	179058675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179056894_179057552_179057714_179058264
ES.21027.6	chr2	+	3895	2	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	19	2466	intron_retention	FALSE	canonical	3	12	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	9	True	NA	NA	NA	179056747	179061141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179056894_179057392
ES.21027.7	chr2	+	567	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCCTTGGTAATGACCC	NA	False	NA	6	True	AATAAA	-21	NA	179056750	179058674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179056894_179057552_179057714_179058411
ES.21028.1	chr2	+	6451	17	NNC	ENSMUSG00000000305.13	novel	6388	16	NA	NA	6	-146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.0138575858657	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGATGTTTTCAATG	NA	False	NA	NA	False	NA	NA	NA	179084229	179541020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179084472_179086492_179086605_179272062_179272278_179422046_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ES.21028.2	chr2	+	1185	2	Intergenic	novelGene_17463	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCCTTGACATTCAAT	NA	False	NA	NA	False	TATAAA	-13	NA	179190768	179192253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179190951_179191250
ES.21028.3	chr2	+	5168	1	Intergenic	novelGene_17465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTCAGGTCCCAATGCAC	NA	False	NA	NA	False	NA	NA	NA	179363420	179368588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179363400_179368600
ES.21028.4	chr2	+	2979	14	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	337839	3033	3107	191	3prime_fragment	FALSE	canonical	3	15	junction_11	4.62690868979156	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAATGTGTCTTTTTTTT	7109	False	NA	NA	False	NA	NA	NA	179422062	179538133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ES.21028.5	chr2	+	5899	14	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	337963	-11	3231	11	3prime_fragment	FALSE	canonical	3	15	junction_11	4.62690868979156	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTTGTGTTCTTCCA	7233	False	NA	15	True	AATAAA	-27	NA	179422186	179541177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ES.21028.6	chr2	+	2597	12	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	400537	3034	-50916	190	3prime_fragment	FALSE	canonical	3	15	junction_9	4.79152143749252	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAATGTGTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	179484760	179538132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ES.21028.8	chr2	+	4579	6	ISM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	444287	1	-7166	-1	3prime_fragment	FALSE	canonical	3	15	junction_3	6.24179461373089	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTCTCCCGACTTGCT	NA	False	NA	3	True	AATAAA	-15	NA	179528510	179541165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ES.21028.9	chr2	+	3829	2	FSM	ENSMUSG00000000305.13	ENSMUST00000129659.2	747	2	140	-3222	115	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTCTCCCGACTTGC	NA	False	NA	2	True	AATAAA	-14	NA	179535816	179541164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179535986_179537504
ES.21029.1	chr2	-	179	1	Intergenic	novelGene_17462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACATGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	179088172	179087993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179088000_179088200
ES.2103.1	chr1	-	5027	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	-102	0	102	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTCGTTTCTTTATTTC	NA	False	NA	99	True	AATAAA	-16	NA	182169183	182140564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.10	chr1	-	2517	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	2408	0	-322	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATCCCTTTCAGGT	NA	False	NA	38	True	AGTAAA	-18	NA	182169183	182143074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.11	chr1	-	1527	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	13	3385	-5	-24	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTATCTTGTTTTTTGTT	NA	False	NA	-2	True	AAGAAA	-24	NA	182169170	182144051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.12	chr1	-	6131	1	NIC	ENSMUSG00000047539.10	novel	4925	5	NA	NA	0	-18244	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCTTATAATTTGCCT	NA	False	NA	NA	False	AAAAAG	-6	NA	182169183	182163052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182163100_182169200
ES.2103.13	chr1	-	1856	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTATAGAAAATCACCT	NA	False	NA	NA	False	NA	NA	NA	182166621	182164765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182164800_182166600
ES.2103.2	chr1	-	5462	4	NIC	ENSMUSG00000047539.10	novel	4925	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	184	junction_2	2.16024689946929	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182169196	182140666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.3	chr1	-	4925	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182169183	182140666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.4	chr1	-	3958	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	-13	980	-2	-980	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGATTTTTTAGAGAAAA	NA	False	NA	-16	True	AATAAA	-24	NA	182169196	182141646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.6	chr1	-	3076	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	1849	0	237	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTAAATGTAGCCTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	182169183	182142515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.7	chr1	-	2873	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	-13	2065	-2	21	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTCCCTGTCTGGAT	NA	False	NA	20	True	AATAAA	-36	NA	182169196	182142731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ES.2103.8	chr1	-	2792	5	FSM	ENSMUSG00000047539.10	ENSMUST00000194213.2	747	5	11	-2056	0	0	multi-exon	FALSE	canonical	2	6	junction_2	73.5505778359355	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTCAGCAAGGTCATC	NA	False	NA	-1	True	AATAAA	-15	NA	182169183	182142752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182144851_182145374_182145524_182153818_182153958_182157438_182157549_182168887
ES.21030.1	chr2	-	2570	7	Antisense	novelGene_ENSMUSG00000000305.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.372677996249965	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATACTGGGGTGTTTTG	NA	False	NA	NA	False	AATAAA	-9	NA	179183710	179154035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_179155521_179155647_179155834_179156138_179156424_179165075_179165159_179166766_179167013_179182387_179182638_179183675
ES.21031.1	chr2	-	159	1	Intergenic	novelGene_17464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	179248037	179247878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179247900_179248000
ES.21032.1	chr2	+	167	1	Intergenic	novelGene_17466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGGATTGTAAAGAG	NA	False	NA	NA	False	NA	NA	NA	179590885	179591052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179590900_179591100
ES.21033.1	chr2	-	4427	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-115	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	27.0541843138707	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCTTTTCCATTCCTG	NA	False	NA	7	True	ATTAAA	-24	NA	179618554	179553937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
ES.21033.10	chr2	-	4411	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.2364019023428	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618510	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
ES.21033.12	chr2	-	4032	17	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	33.3981661173185	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618522	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617469_179617645_179618088_179618376
ES.21033.13	chr2	-	3972	17	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.0321783597285	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618495	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617472_179617645_179618088_179618376
ES.21033.14	chr2	-	4140	17	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.4963902622759	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618495	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564745_179564873_179565771_179565903_179566205_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617632_179617856_179618088_179618162
ES.21033.16	chr2	-	3595	17	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.0321783597285	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618467	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617346_179617868_179618088_179618376
ES.21033.17	chr2	-	4165	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-10	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	27.0541843138707	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCACGCCTGCTTTTC	NA	False	NA	-1	True	ATTAAA	-16	NA	179618449	179553945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617926_179618149
ES.21033.18	chr2	-	4392	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.4222813238248	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618467	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573678_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617538_179617681
ES.21033.19	chr2	-	3679	17	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.0321783597285	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618467	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617490_179617927_179618088_179618376
ES.21033.2	chr2	-	4180	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-85	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	24.7328840929552	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTGCTTTTCCATTC	NA	False	NA	4	True	ATTAAA	-21	NA	179618524	179553940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
ES.21033.21	chr2	-	4177	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	255	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.4222813238248	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618184	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573679_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
ES.21033.22	chr2	-	4098	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	63	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.0541843138707	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618376	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617541_179617757
ES.21033.23	chr2	-	3672	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	381	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.0541843138707	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618058	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617439_179617763
ES.21033.24	chr2	-	3810	7	NIC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-1690	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	40.1556001352517	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179572838	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179566209_179566380_179568008_179568124_179571069
ES.21033.25	chr2	-	4157	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	28.2446455102556	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618471	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
ES.21033.26	chr2	-	4087	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.0541843138707	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618510	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617388_179617749
ES.21033.27	chr2	-	3946	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-37	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	30.2364019023428	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618476	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617800_179618304
ES.21033.28	chr2	-	2991	13	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.2861888326674	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618486	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179618376
ES.21033.29	chr2	-	4028	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	37.8408362604328	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179618474	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617468_179617646_179618088_179618162
ES.21033.30	chr2	-	3695	14	NIC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	535	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	28.2161982937788	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCACGCCTGCTTTT	NA	False	NA	-2	True	ATTAAA	-15	NA	179617904	179553946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ES.21033.32	chr2	-	4168	17	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	32.6816438348808	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCACGCCTGCTTT	NA	False	NA	-3	True	ATTAAA	-14	NA	179618479	179553947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617475_179617648_179618088_179618162
ES.21033.33	chr2	-	3235	15	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	27.0969536656648	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCACGCCTGCTTT	NA	False	NA	-3	True	ATTAAA	-14	NA	179618468	179553947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179618376
ES.21033.34	chr2	-	4241	14	NIC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	31.1592587890666	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCACGCCTGCTT	NA	False	NA	-4	True	ATTAAA	-13	NA	179618429	179553948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179617205
ES.21033.35	chr2	-	4235	14	NIC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-19	-33	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.5236328881174	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTCCTTTATTAAAAAC	NA	False	NA	-33	True	AAGAAA	-2	NA	179618458	179553977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ES.21033.36	chr2	-	3865	16	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-29	-291	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	28.2446455102556	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATGACTGTAAATACT	NA	False	NA	NA	False	ATTAAA	-17	NA	179618468	179554235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
ES.21033.37	chr2	-	3698	17	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-25	-292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.889110048839	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTATGACTGTAAATAC	NA	False	NA	NA	False	ATTAAA	-16	NA	179618464	179554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617439_179617814_179618088_179618162
ES.21033.39	chr2	-	4041	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-28	-292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.0541843138707	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTATGACTGTAAATAC	NA	False	NA	NA	False	ATTAAA	-16	NA	179618467	179554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618162
ES.21033.4	chr2	-	6709	15	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-27	0	intron_retention	FALSE	canonical	3	12	junction_14	24.7593519746394	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618466	179553944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179618088_179618376
ES.21033.5	chr2	-	7809	2	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	1911	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179562090	179553944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179555736
ES.21033.6	chr2	-	4223	17	NNC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.889110048839	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618495	179553944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617472_179617645_179618088_179618162
ES.21033.8	chr2	-	4296	14	NIC	ENSMUSG00000039117.17	novel	4416	15	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	28.2161982937788	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618467	179553944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ES.21033.9	chr2	-	4012	16	NNC	ENSMUSG00000039117.17	novel	4380	15	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	27.0541843138707	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618467	179553944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205_179617438_179617833
ES.21034.1	chr2	+	3149	2	FSM	ENSMUSG00000085704.2	ENSMUST00000150145.2	1905	2	0	-1244	0	1244	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAGCTCACATGTCCAG	NA	False	NA	NA	False	AATAAA	-26	NA	179618645	179622050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179618986_179619241
ES.21034.2	chr2	+	3284	2	FSM	ENSMUSG00000085704.2	ENSMUST00000150145.2	1905	2	31	-1410	31	1410	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAGATAAAAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	179618676	179622216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179618986_179619241
ES.21035.1	chr2	+	182	1	Intergenic	novelGene_17467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	179635808	179635990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179635800_179636000
ES.21036.1	chr2	-	177	1	Intergenic	novelGene_17468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATAGATTT	NA	False	NA	NA	False	NA	NA	NA	179641163	179640986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179641000_179641200
ES.21037.1	chr2	+	2614	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-76	-4	-76	0	multi-exon	TRUE	canonical	3	38	junction_3	10.2705586508232	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCCGTCACCTGT	NA	False	NA	19	True	AATAAA	-20	NA	179666703	179677258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.10	chr2	+	2289	7	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	21.8993911635309	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCCGTCACCTGTG	NA	False	NA	20	True	AATAAA	-21	NA	179666783	179677259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.11	chr2	+	3276	6	NIC	ENSMUSG00000039108.15	novel	2566	9	NA	NA	229	-805	intron_retention	FALSE	canonical	3	38	junction_2	12.7843654515975	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGGTGTCCAAATGTG	NA	False	NA	NA	False	NA	NA	NA	179667008	179676449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179668592_179669692_179669829_179673153_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.12	chr2	+	2399	4	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	3413	-2	intron_retention	FALSE	canonical	3	53	junction_1	9.89949493661167	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCCTCTGTCCGTC	NA	False	NA	13	True	AATAAA	-14	NA	179673114	179677252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.2	chr2	+	1910	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-63	-804	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	16.1176232049821	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTGTCCAAATGTGT	NA	False	NA	NA	False	NA	NA	NA	179666716	179676450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.3	chr2	+	2279	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-29	284	-29	-284	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCAGATCTTCTCT	NA	False	NA	NA	False	CATAAA	-15	NA	179666750	179676970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.4	chr2	+	2393	10	NNC	ENSMUSG00000039108.15	novel	2566	9	NA	NA	-28	-284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.7813005405966	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCAGATCTTCTCT	NA	False	NA	NA	False	CATAAA	-15	NA	179666751	179676970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179667106_179668429_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.5	chr2	+	1739	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	-10	805	-10	-805	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGGTGTCCAAATGTG	NA	False	NA	NA	False	NA	NA	NA	179666769	179676449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.7	chr2	+	2658	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	16.1176232049821	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCCTCTGTCCGTC	NA	False	NA	13	True	AATAAA	-14	NA	179666770	179677252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.8	chr2	+	2504	11	NNC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.9155196151038	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCCTCTGTCCGTC	NA	False	NA	13	True	AATAAA	-14	NA	179666775	179677252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179666821_179666969_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21037.9	chr2	+	4135	9	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	-3	-805	intron_retention	FALSE	canonical	3	24	junction_3	13.9547259020018	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGGTGTCCAAATGTG	NA	False	NA	NA	False	NA	NA	NA	179666776	179676449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ES.21038.1	chr2	+	4364	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	-21	0	-21	0	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTTCTGTTTATTGAG	NA	False	NA	18	True	ATTAAA	-19	NA	179684280	179711994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.10	chr2	+	4398	12	NNC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	247	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6078489747281	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179684548	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179684662_179693342_179693646_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.12	chr2	+	5572	7	NIC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	12444	-1	intron_retention	FALSE	canonical	3	19	junction_1	7.23417813807024	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179696745	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179696957_179697493_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.13	chr2	+	3843	4	ISM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	16194	1	16194	-1	3prime_fragment	FALSE	canonical	3	28	junction_1	4.96655480858378	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179700495	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.2	chr2	+	4441	11	NNC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.2853887837327	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179684299	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179684662_179694256_179694431_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.3	chr2	+	4354	11	NNC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	10.1488915650922	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCATTTCTGTTTATTG	NA	False	NA	16	True	ATTAAA	-17	NA	179684320	179711992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696989_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.4	chr2	+	4516	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	19	-192	19	192	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGGCTTTTTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	179684320	179712186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.5	chr2	+	3896	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	19	428	19	-428	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGTGCAGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	179684320	179711566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.7	chr2	+	4138	10	NIC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	11.6045967903528	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179684340	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21038.8	chr2	+	5468	11	NNC	ENSMUSG00000039086.10	novel	4343	11	NA	NA	202	-1	intron_retention	FALSE	canonical	0	0	junction_10	13.5513836931879	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTCTGTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	179684503	179711993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696989_179697493_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124_179709364_179709753
ES.21038.9	chr2	+	3554	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	236	553	236	-553	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAATGTTTTATTGA	NA	False	NA	NA	False	AATATA	-18	NA	179684537	179711441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ES.21039.1	chr2	-	1085	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-161	-10	-161	10	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTCGTCATTTGGG	NA	False	NA	-2	True	AATAAA	-27	NA	179684387	179678156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.11	chr2	-	4038	5	NIC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	3	3	intron_retention	FALSE	canonical	3	4468	junction_4	566.522892300038	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGAGAACCTGTCGTC	NA	False	NA	-9	True	AATAAA	-20	NA	179684185	179678163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145
ES.21039.12	chr2	-	1989	5	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	2	1	intron_retention	FALSE	canonical	3	3926	junction_1	684.789931292802	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATGAGAACCTGTCG	NA	False	NA	-11	True	AATAAA	-18	NA	179684201	179678165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179678730_179678794_179679175_179680643_179681145_179681273_179684070
ES.21039.13	chr2	-	5702	2	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-6	0	-6	0	intron_retention	FALSE	canonical	3	3926	junction_1	0	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684232	179678166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179678367_179678730
ES.21039.14	chr2	-	5675	2	FSM	ENSMUSG00000027566.16	ENSMUST00000135650.2	288	2	-4942	-445	3	0	multi-exon	FALSE	canonical	3	5807	junction_1	0	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684223	179678166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179678794_179679175
ES.21039.15	chr2	-	2370	4	NIC	ENSMUSG00000027566.16	novel	1157	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	4468	junction_2	584.089604997955	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGATGAGAACCTGT	NA	False	NA	-13	True	AATAAA	-16	NA	179684220	179678167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678794_179679175_179680643_179681145_179681273_179684070
ES.21039.17	chr2	-	879	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1822.50292638082	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684206	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681255_179684065
ES.21039.18	chr2	-	1271	6	NIC	ENSMUSG00000027566.16	novel	1157	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	4468	junction_4	509.223722935214	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684221	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.2	chr2	-	4780	4	NIC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	3	6	intron_retention	FALSE	canonical	3	3926	junction_1	782.185115912823	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGAACCTGTCGTCATT	NA	False	NA	-6	True	AATAAA	-23	NA	179684223	179678160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179678730_179678794_179679175_179679981_179680517
ES.21039.20	chr2	-	5146	3	NIC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	11	-2	intron_retention	FALSE	canonical	3	3926	junction_1	312.5	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684215	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179678730_179679981_179680517
ES.21039.21	chr2	-	2100	7	NNC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1822.50292638082	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684236	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179682892
ES.21039.25	chr2	-	773	6	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	1	25	junction_2	1773.99429536851	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684207	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179678730_179678794_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.26	chr2	-	1412	6	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	3	-2	intron_retention	FALSE	canonical	3	3926	junction_1	615.404127382974	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684223	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179681273_179684070
ES.21039.27	chr2	-	796	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	2	73	junction_6	1796.67087198024	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684257	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684217
ES.21039.28	chr2	-	1973	5	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_2	1910.89931380489	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684197	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678785_179679175_179680643_179681145_179681273_179684070
ES.21039.29	chr2	-	3724	6	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-14	2	-14	-2	intron_retention	FALSE	canonical	3	3926	junction_1	621.867188393149	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684240	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145
ES.21039.3	chr2	-	4237	5	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-17	-5	-17	5	intron_retention	FALSE	canonical	3	3926	junction_1	688.030295481238	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684243	179678161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517
ES.21039.30	chr2	-	1004	7	NNC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1822.50292638082	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684218	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681270_179683967
ES.21039.31	chr2	-	1525	7	FSM	ENSMUSG00000027566.16	ENSMUST00000126021.8	1515	7	-12	2	3	-2	multi-exon	FALSE	canonical	0	0	junction_6	1822.50292638082	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	False	NA	-14	True	AATAAA	-15	NA	179684200	179678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179683431
ES.21039.32	chr2	-	845	6	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	1820.16961846966	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCTGTGATGAGAACCT	NA	False	NA	-15	True	AATAAA	-14	NA	179684223	179678169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678367_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.33	chr2	-	768	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	20	126	-3	-126	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGAAAGCATCTTGAT	NA	False	NA	-138	True	NA	NA	NA	179684206	179678292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.34	chr2	-	4748	1	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	6	-46	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTGTTGGCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	179684220	179679472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179679500_179684200
ES.21039.35	chr2	-	4248	2	FSM	ENSMUSG00000027566.16	ENSMUST00000142042.2	651	2	-3643	46	-31	-46	multi-exon	FALSE	canonical	3	4551	junction_1	0	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTGTTGGCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	179684257	179679472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179679981_179680517
ES.21039.36	chr2	-	909	4	ISM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	-17	1330	-17	-70	5prime_fragment	FALSE	canonical	3	4468	junction_2	96.4238329229634	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179684243	179679496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.4	chr2	-	5145	3	NIC	ENSMUSG00000027566.16	novel	1515	7	NA	NA	1	5	intron_retention	FALSE	canonical	3	4551	junction_2	628	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684225	179678161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678794_179679175_179679981_179680517
ES.21039.5	chr2	-	897	7	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1666.80086959687	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684206	179678161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179678367_179678730_179678788_179679171_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ES.21039.6	chr2	-	1780	5	NIC	ENSMUSG00000027566.16	novel	1157	7	NA	NA	6	5	intron_retention	FALSE	canonical	3	4483	junction_2	537.842681459923	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684220	179678161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179678794_179679175_179679296_179679857_179679981_179680517_179681273_179684070
ES.21039.7	chr2	-	6091	1	Genic_Genomic	ENSMUSG00000027566.16	novel	NA	NA	NA	NA	-26	5	mono-exon	FALSE	NA	NA	NA	NA	NA	651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGAACCTGTCGTCAT	NA	False	NA	-7	True	AATAAA	-22	NA	179684252	179678161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_179678200_179684300
ES.21039.9	chr2	-	5295	3	ISM	ENSMUSG00000027566.16	ENSMUST00000126021.8	1515	7	-16	-3	-1	3	intron_retention	FALSE	canonical	3	3926	junction_1	940.5	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGAGAACCTGTCGTC	NA	False	NA	-9	True	AATAAA	-20	NA	179684204	179678163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179678367_179678730_179678794_179679175
ES.2104.1	chr1	-	182	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGGATTTGTACAAAGA	NA	False	NA	NA	False	NA	NA	NA	182186392	182186210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182186200_182186400
ES.21040.1	chr2	+	1729	10	FSM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	-6	7	-2	0	multi-exon	FALSE	canonical	3	26	junction_8	58.7703208880465	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712378	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
ES.21040.10	chr2	+	1468	8	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	-1185	intron_retention	FALSE	canonical	3	15	junction_1	68.2408699133489	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTTTAATGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179726503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713582_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856
ES.21040.11	chr2	+	1612	9	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	86.5800749306675	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712387	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179714894_179715027_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726376_179727172
ES.21040.12	chr2	+	1728	10	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	64.7881638329063	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712387	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179714894_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.13	chr2	+	1457	8	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_7	74.9503236844789	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712387	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179727172
ES.21040.14	chr2	+	1604	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	73.5202990676725	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712387	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725856_179726106_179726243_179726383_179727172
ES.21040.15	chr2	+	4132	4	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	30	junction_2	81.9972899281162	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGATGTGTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	179712387	179727691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878
ES.21040.16	chr2	+	1486	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	74.3955232359516	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712388	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
ES.21040.17	chr2	+	3406	6	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	4	-2	intron_retention	FALSE	canonical	2	3	junction_2	78.8958807543208	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGATGTGTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	179712388	179727691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179719870_179719936_179720411_179720617_179723878_179726383_179727172
ES.21040.18	chr2	+	1304	8	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	80.0703772073196	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712389	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179725925_179726243_179726383_179727172
ES.21040.19	chr2	+	1673	10	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.4631679567861	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712400	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712429_179713586_179713680_179714932_179715027_179720411_179720617_179722895_179723011_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.2	chr2	+	1607	9	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	53.7558136390847	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGGATGTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	179712378	179727690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.20	chr2	+	867	6	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	17	-496	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	78.1792811427683	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTTTTGTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	179712401	179724187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712429_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878
ES.21040.21	chr2	+	1719	10	NNC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	80.9249004087916	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712401	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712429_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726376_179727172
ES.21040.22	chr2	+	2068	9	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.0415633778906	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712418	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712878_179713582_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
ES.21040.23	chr2	+	1787	10	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	53	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	92.8073805068498	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712437	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712641_179713586_179713673_179714932_179715027_179719870_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725860_179726076_179726243_179726383_179727172
ES.21040.24	chr2	+	2015	10	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.535654880692	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712440	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712641_179713586_179713680_179714932_179715027_179719650_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.25	chr2	+	1872	9	NNC	ENSMUSG00000039069.20	novel	1444	7	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	86.4595281041945	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712461	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712878_179713586_179713680_179714932_179715027_179719870_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179727172
ES.21040.26	chr2	+	2442	7	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	103	junction_2	42.7294460010372	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179726383_179727172
ES.21040.27	chr2	+	2629	7	ISM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	1200	7	-1	0	intron_retention	FALSE	canonical	3	103	junction_2	41.8678476478869	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856
ES.21040.28	chr2	+	1235	6	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.2218270456345	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179713680_179714894_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179727172
ES.21040.29	chr2	+	1810	9	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.1580929910652	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179713680_179714932_179715027_179719650_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726376_179727172
ES.21040.3	chr2	+	2632	11	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.7825837511496	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712378	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179713788_179714722_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.30	chr2	+	2924	8	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	103	junction_1	39.4559946041673	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.31	chr2	+	1671	9	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_2	38.3305931991666	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.32	chr2	+	1532	8	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_7	65.9560769120833	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713584	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179727172
ES.21040.33	chr2	+	2781	8	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	103	junction_2	39.1897529297376	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179713585	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.34	chr2	+	1609	6	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	0	-925	intron_retention	FALSE	canonical	3	49	junction_1	63.2411258596809	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGAGGTTATTTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	179713585	179726763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179713680_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856
ES.21040.35	chr2	+	2093	6	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	-1310	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	92.1650693050247	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGATGTGTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	179719102	179727691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179719936_179720411_179720617_179723878_179724027_179725856_179726106_179726243_179726383_179727172
ES.21040.36	chr2	+	184	1	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	9636	196	1605	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGTGCTGCCAAG	NA	False	NA	NA	False	NA	NA	NA	179722020	179722204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179722000_179722200
ES.21040.37	chr2	+	1139	5	ISM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	3462	7	-904	0	3prime_fragment	FALSE	canonical	3	144	junction_3	22.3327114341273	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179723877	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.38	chr2	+	1870	3	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	79	0	intron_retention	FALSE	canonical	3	144	junction_1	3	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179724860	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179726076_179726243_179726383_179727172
ES.21040.4	chr2	+	1702	10	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	39.9749921826134	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTGTCTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	179712381	179727694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.5	chr2	+	887	6	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	-2	-513	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	80.480059642125	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAGAGACTTTGGATG	NA	False	NA	NA	False	NA	NA	NA	179712382	179724170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713586_179713680_179714894_179715027_179719796_179719936_179720411_179720617_179723878
ES.21040.6	chr2	+	1582	9	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	66.3785309795268	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712386	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179727172
ES.21040.7	chr2	+	2801	9	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	103	junction_3	40.2350515719814	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATATGGATGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	179712386	179727687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.8	chr2	+	1458	8	NIC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	60.3080527333605	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712386	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21040.9	chr2	+	1659	10	NNC	ENSMUSG00000039069.20	novel	2224	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	86.278618440492	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	179712386	179727688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179712409_179713582_179713680_179714894_179715027_179719870_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ES.21041.1	chr2	-	187	1	Intergenic	novelGene_17469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATGCTGGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	179718955	179718768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179718800_179719000
ES.21042.1	chr2	-	176	1	Antisense	novelGene_ENSMUSG00000039069.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	179721726	179721550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_179721600_179721700
ES.21043.1	chr2	-	2666	3	FSM	ENSMUSG00000039059.12	ENSMUST00000166724.2	1574	3	-289	-803	25	-11	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGCTGACTTTTGGGG	NA	False	NA	NA	False	AATAAA	-13	NA	179746256	179741268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179743210_179744521_179744689_179745698
ES.21044.1	chr2	+	2608	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	-23	220	-23	-220	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTGTCCACCTCTGC	NA	False	NA	8	True	ATTAAA	-16	NA	179761075	179804253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.10	chr2	+	2744	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	46.788963448571	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179761134	179804475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.11	chr2	+	3845	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	25	1121	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	46.788963448571	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTTTCTGGTCTTTCT	NA	False	NA	NA	False	GATAAA	-41	NA	179761152	179805594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.12	chr2	+	2082	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	113	610	15	-610	multi-exon	FALSE	canonical	3	166	junction_6	20.3809866146027	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTTAAATTGAAACT	NA	False	NA	NA	False	NA	NA	NA	179761211	179803863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.14	chr2	+	6022	1	NIC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	-3972	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTTACTCAGGGATA	NA	False	NA	NA	False	NA	NA	NA	179787199	179793221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179787200_179793200
ES.21044.15	chr2	+	4842	2	ISM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	37457	0	7384	0	intron_retention	FALSE	canonical	3	193	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGTTGAAGGTTTGA	NA	False	NA	10	True	ATTAAA	-16	NA	179798555	179804473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179799746_179800821
ES.21044.16	chr2	+	180	1	Intergenic	novelGene_17470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTAACGAAACC	NA	False	NA	NA	False	NA	NA	NA	179799957	179800137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179800000_179800100
ES.21044.17	chr2	+	3175	1	Intergenic	novelGene_17472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTTATGTGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	179808577	179811752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179808600_179811800
ES.21044.18	chr2	+	1579	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	-18	-26	-18	26	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCTCTGGGCTCTGT	NA	False	NA	28	True	NA	NA	NA	179813259	179818105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.2	chr2	+	2816	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	-9	-2	-9	2	multi-exon	FALSE	canonical	3	166	junction_6	20.3809866146027	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179761089	179804475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.20	chr2	+	1416	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	729.37377164622	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813282	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817075_179817390_179817549_179817646_179817750_179817866
ES.21044.21	chr2	+	1796	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	11	1	intron_retention	FALSE	canonical	3	1931	junction_5	180.981654802358	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813288	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.22	chr2	+	3552	6	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	15	1	intron_retention	FALSE	canonical	3	2056	junction_3	150.190012983554	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813292	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179816189_179816657_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.23	chr2	+	1522	9	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	45	1	intron_retention	FALSE	canonical	0	0	junction_6	768.553013379689	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813322	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179817017_179817186_179817390_179817750_179817866
ES.21044.24	chr2	+	4754	1	FSM	ENSMUSG00000039041.16	ENSMUST00000147383.2	4131	1	-624	1	45	1	mono-exon	FALSE	NA	NA	NA	NA	NA	788	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813322	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179813300_179818100
ES.21044.25	chr2	+	1919	7	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-41	1	intron_retention	FALSE	canonical	0	0	junction_5	846.224884741376	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813346	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816223_179816657_179816740_179816952
ES.21044.26	chr2	+	1932	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-39	1	intron_retention	FALSE	canonical	3	1931	junction_5	180.076199149138	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813348	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.27	chr2	+	1538	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	1931	junction_6	165.514349831064	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813370	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817750_179817866
ES.21044.28	chr2	+	1351	10	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	732.450647222927	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813377	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179817035_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.29	chr2	+	3763	2	NIC	ENSMUSG00000039041.16	novel	2576	5	NA	NA	-9	1	intron_retention	FALSE	canonical	3	2248	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813378	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179814766_179815702
ES.21044.3	chr2	+	2936	22	Fusion	ENSMUSG00000039041.16_ENSMUSG00000039050.9	novel	2805	14	NA	NA	8	0	multi-exon	FALSE	canonical	3	32	junction_13	1017.85081256734	970	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179761106	179818079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.30	chr2	+	1637	8	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	110	3	0	1	intron_retention	FALSE	canonical	3	1931	junction_6	155.708256764019	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813387	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390
ES.21044.31	chr2	+	4103	3	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	2327	junction_1	67	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813387	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816189_179816657_179817750_179817866
ES.21044.32	chr2	+	4572	2	NIC	ENSMUSG00000039041.16	novel	713	3	NA	NA	0	1	intron_retention	FALSE	canonical	3	2461	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813387	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179817750_179817866
ES.21044.33	chr2	+	1726	8	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1931	junction_6	158.026605871497	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813388	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817750_179817866
ES.21044.34	chr2	+	1864	8	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1931	junction_5	173.415155988543	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813388	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817750_179817866
ES.21044.35	chr2	+	3243	7	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1931	junction_3	202.643090733985	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813388	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.36	chr2	+	3056	5	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1931	junction_4	184.934278866845	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813388	179818079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179816189_179816657_179816740_179816952
ES.21044.37	chr2	+	4220	2	NIC	ENSMUSG00000039041.16	novel	2612	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	2327	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813388	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816189_179816657
ES.21044.38	chr2	+	1998	7	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1931	junction_5	170.557582325996	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813388	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179816189_179816657_179816740_179816952_179817750_179817866
ES.21044.39	chr2	+	1842	7	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	111	2	1	0	intron_retention	FALSE	canonical	3	1931	junction_6	151.143879208595	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813388	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952
ES.21044.4	chr2	+	2785	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.8477672301495	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	False	NA	12	True	ATTAAA	-18	NA	179761112	179804475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179761263_179778779_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.40	chr2	+	3462	4	ISM	ENSMUSG00000039041.16	ENSMUST00000152540.8	2612	6	-18	-150	1	1	intron_retention	FALSE	canonical	3	2266	junction_3	52.8540968663315	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813388	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179813482_179813826_179814041_179814648_179815827_179816101
ES.21044.42	chr2	+	3180	4	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	5	1	intron_retention	FALSE	canonical	3	2248	junction_1	93.203481098556	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813392	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179814766_179815702_179816189_179816657_179817549_179817646
ES.21044.43	chr2	+	1400	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	716.881363189816	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTATGGTCTGGGCC	NA	False	NA	-4	True	AATAAA	-16	NA	179813392	179818073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813468_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.44	chr2	+	4003	3	NIC	ENSMUSG00000039041.16	novel	2612	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	1931	junction_2	198	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813392	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816189_179816657_179816740_179816952
ES.21044.46	chr2	+	3225	5	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	2266	junction_2	77.1504212561409	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813400	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179814041_179814648_179815827_179816101_179816189_179816657_179817549_179817646
ES.21044.48	chr2	+	1827	8	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	2248	junction_3	81.9840701301298	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813400	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179817549_179817646_179817750_179817866
ES.21044.49	chr2	+	3572	6	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	1931	junction_2	218.895043342694	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813401	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.5	chr2	+	2595	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	-14	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	56.9397065106134	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAAGTAGGTGTGTCCA	NA	False	NA	1	True	ATTAAA	-9	NA	179761113	179804246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800945_179803281
ES.21044.50	chr2	+	1409	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	736.852766840161	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813403	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814778_179815711_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.51	chr2	+	2094	6	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	1931	junction_5	165.410277794338	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCCAGTATGGTCTGG	NA	False	NA	-7	True	AATAAA	-13	NA	179813404	179818070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179816189_179816657_179816740_179816952
ES.21044.52	chr2	+	2215	6	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	2248	junction_3	74.7919781794812	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813406	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179816189_179816657_179817549_179817646
ES.21044.53	chr2	+	2546	8	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1931	junction_5	170.413542625591	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813407	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179814648_179815827_179816101_179816189_179816657_179816740_179816952_179817549_179817646_179817750_179817866
ES.21044.54	chr2	+	2651	4	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	2248	junction_2	60.0684794399044	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTATGGTCTGGGCCT	NA	False	NA	-3	True	AATAAA	-17	NA	179813409	179818074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179814041_179814648_179814766_179815702_179816189_179816657
ES.21044.55	chr2	+	3599	5	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_1	989.187892920248	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813410	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179815832_179816101_179816189_179816657_179816740_179816952_179817750_179817866
ES.21044.56	chr2	+	2033	6	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	134	1	5	1	intron_retention	FALSE	canonical	3	2248	junction_3	53.0260313431054	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813411	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657
ES.21044.57	chr2	+	3762	5	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	2056	junction_2	167.848704195177	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813424	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816189_179816657_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.58	chr2	+	4438	2	NIC	ENSMUSG00000039041.16	novel	2612	6	NA	NA	18	0	intron_retention	FALSE	canonical	3	1931	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813424	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816740_179816952
ES.21044.59	chr2	+	1326	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	732.755529946152	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813426	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817447_179817549_179817646_179817750_179817866
ES.21044.6	chr2	+	4650	8	NIC	ENSMUSG00000039050.9	novel	1688	13	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	168	junction_2	18.7224627718924	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179761116	179793194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179790402_179791971_179792080_179792808
ES.21044.60	chr2	+	2905	6	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-21	1	intron_retention	FALSE	canonical	3	35	junction_3	935.550875153244	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813430	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179814766_179815702_179815827_179816101_179817075_179817390_179817549_179817646_179817750_179817866
ES.21044.61	chr2	+	1396	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	722.519938637264	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTATGGTCTGGGCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	179813431	179818075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817847
ES.21044.62	chr2	+	4294	2	FSM	ENSMUSG00000039041.16	ENSMUST00000155357.2	500	2	50	-3844	-14	1	multi-exon	FALSE	canonical	3	2340	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGGTCTGGGCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	179813437	179818076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179813482_179813826
ES.21044.63	chr2	+	1253	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_2	765.129880722874	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813440	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179813482_179813826_179814041_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.64	chr2	+	1560	9	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	318	2	144	0	3prime_fragment	FALSE	canonical	3	1931	junction_5	179.506223777896	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813595	179818077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.65	chr2	+	1434	9	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	214	1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	769.646662030701	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179813665	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817447_179817549_179817646_179817750_179817866
ES.21044.66	chr2	+	1813	5	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	-1519	-1	intron_retention	FALSE	canonical	3	1931	junction_1	240.876913588663	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTATGGTCTGGGCCT	NA	False	NA	-3	True	AATAAA	-17	NA	179815628	179818074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.7	chr2	+	6019	13	NIC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	168	junction_2	18.7533330370897	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCAACATGGGTTGAA	NA	False	NA	3	True	ATTAAA	-9	NA	179761116	179804466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ES.21044.8	chr2	+	2892	22	Fusion	ENSMUSG00000039041.16_ENSMUSG00000039050.9	novel	2805	14	NA	NA	-5	1	multi-exon	FALSE	canonical	3	32	junction_13	1023.06953323871	970	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	False	NA	1	True	AATAAA	-21	NA	179761122	179818078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ES.21044.9	chr2	+	5154	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	56.2433428013259	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGTTGAAGGTTTGA	NA	False	NA	10	True	ATTAAA	-16	NA	179761126	179804473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797366_179797409_179799746_179800821_179800913_179803281
ES.21045.1	chr2	+	183	1	Intergenic	novelGene_17473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAAAAAACGATT	NA	False	NA	NA	False	NA	NA	NA	179826621	179826804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179826600_179826800
ES.21046.1	chr2	+	3149	25	Antisense	novelGene_ENSMUSG00000015647.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGCGGCTCTAGGGA	NA	False	NA	NA	False	NA	NA	NA	179837183	179867604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_179837281_179837353_179837496_179837675_179837818_179837963_179838117_179838275_179838379_179838829_179838934_179839017_179839068_179839164_179839272_179839509_179839563_179840053_179840196_179840267_179840405_179840489_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844075_179844184_179844300_179848516_179848616_179848725_179848897_179848979_179849099_179850046_179850163_179863016_179863171_179867282
ES.21047.1	chr2	-	11440	80	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-7	11762	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6626191027691	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCTGTGGCTGAGACA	NA	False	NA	NA	False	NA	NA	NA	179867659	179806403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179806444_179818160_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.10	chr2	-	6459	43	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-11639	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.0130513367791	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGTGTTGATTTATAA	NA	False	NA	-3	True	ATTAAA	-15	NA	179833075	179818164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820689_179821033_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020
ES.21047.11	chr2	-	4752	29	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-7167	1	intron_retention	FALSE	canonical	0	0	junction_10	79.4263874314334	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGTGTTGATTTATAA	NA	False	NA	-3	True	ATTAAA	-15	NA	179828603	179818164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354
ES.21047.13	chr2	-	7710	44	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-12544	0	intron_retention	FALSE	canonical	2	96	junction_43	76.3393196541395	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179833980	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886
ES.21047.14	chr2	-	11848	77	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_22	90.3507055866195	453	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867705	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824257_179824559_179824663_179824756_179825007_179825112_179825268_179825410_179825528_179825810_179825991_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.15	chr2	-	13422	71	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-30	0	intron_retention	FALSE	canonical	2	61	junction_60	84.6501998020714	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867682	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179834099_179834181_179834298_179834655_179835324_179835484_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.16	chr2	-	11644	78	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	51	0	intron_retention	FALSE	canonical	1	2	junction_51	87.107403707944	453	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867601	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836561_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.17	chr2	-	15386	63	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-7	0	intron_retention	FALSE	canonical	3	61	junction_52	85.2629235308775	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867659	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179831357_179831952_179832037_179832122_179832595_179832697_179832839_179833020_179833166_179833343_179834099_179834181_179834298_179834655_179835324_179835484_179836392_179836467_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839563_179840053_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.19	chr2	-	5880	39	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-9776	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	80.3189495480967	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179831212	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822231_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125
ES.21047.2	chr2	-	220	1	Intergenic	novelGene_17471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGGAAGTCTGTGGCT	62	False	NA	NA	False	NA	NA	NA	179806629	179806409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179806400_179806600
ES.21047.20	chr2	-	10878	77	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	88.3496422164707	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867608	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179829522_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.21	chr2	-	5828	35	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-8681	0	intron_retention	FALSE	canonical	0	0	junction_12	78.652294251366	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179830117	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821750_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057
ES.21047.22	chr2	-	6436	41	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-11098	0	intron_retention	FALSE	canonical	2	105	junction_37	75.0242460808504	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179832534	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432
ES.21047.23	chr2	-	11469	78	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	0	0	intron_retention	FALSE	canonical	2	61	junction_67	85.5043927563815	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867652	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.24	chr2	-	10455	75	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	18897	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	87.2992019288502	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179848755	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834688_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725
ES.21047.25	chr2	-	12520	75	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	27	0	intron_retention	FALSE	canonical	3	61	junction_64	86.5677331638517	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867625	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179834099_179834181_179834298_179834655_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.26	chr2	-	11304	79	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_64	86.8794762444211	453	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867632	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840128_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.28	chr2	-	4641	28	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5800	0	intron_retention	FALSE	canonical	0	0	junction_10	74.1871914079421	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179827236	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821055_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
ES.21047.29	chr2	-	4154	27	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-4474	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	73.8064095771807	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179825910	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179821998_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810
ES.21047.3	chr2	-	11388	79	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	87.099372125114	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTTGATTTATAAACAG	NA	False	NA	1	True	ATTAAA	-19	NA	179867646	179818160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827414_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.30	chr2	-	5052	26	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-6053	0	intron_retention	FALSE	canonical	2	111	junction_25	62.1810260449279	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179827489	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415
ES.21047.32	chr2	-	11219	60	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-18944	0	intron_retention	FALSE	canonical	2	63	junction_54	84.7880335255486	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179840380	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179834099_179834181_179834298_179834655_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267
ES.21047.33	chr2	-	11443	79	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	87.0895388161125	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867599	179818165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179825007_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.35	chr2	-	5943	36	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-9018	-1	intron_retention	FALSE	canonical	2	111	junction_27	70.22631636505	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179830454	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359
ES.21047.36	chr2	-	12016	76	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-54	-1	intron_retention	FALSE	canonical	2	61	junction_65	85.6226408271914	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179867706	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834298_179834655_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.37	chr2	-	4483	16	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-2615	-1	intron_retention	FALSE	canonical	3	206	junction_14	49.588708392133	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179824051	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819998_179820069_179820216_179820307_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364
ES.21047.38	chr2	-	4846	26	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5800	-1	intron_retention	FALSE	canonical	3	153	junction_25	58.8914119375652	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179827236	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
ES.21047.39	chr2	-	7348	47	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-13291	-1	intron_retention	FALSE	canonical	2	81	junction_46	77.3287026974432	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179834727	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655
ES.21047.4	chr2	-	11764	78	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	29	4	intron_retention	FALSE	canonical	2	61	junction_67	85.7644068335315	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGTTGATTTATAAACA	NA	False	NA	0	True	ATTAAA	-18	NA	179867623	179818161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.41	chr2	-	3333	2	ISM	ENSMUSG00000015647.10_ENSMUSG00000098735.3	ENSMUST00000123906.2	451	5	-1383	-794	37	-1	intron_retention	FALSE	canonical	3	339	junction_1	0	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179821579	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179818987_179819066
ES.21047.43	chr2	-	7935	47	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-13306	-1	intron_retention	FALSE	canonical	2	81	junction_46	78.7598375047887	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179834742	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655
ES.21047.45	chr2	-	4624	25	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-4795	-1	intron_retention	FALSE	canonical	3	156	junction_23	57.761708168609	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179826231	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193
ES.21047.46	chr2	-	5309	35	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-8001	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	83.3617621634971	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179829437	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819227_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820609_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338
ES.21047.47	chr2	-	2192	7	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	509	-1	intron_retention	FALSE	canonical	3	304	junction_4	16.8465294810402	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179820927	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307
ES.21047.48	chr2	-	4158	27	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-4415	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	86.291759464501	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179825851	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820609_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179825007_179825112_179825268_179825410_179825528_179825810
ES.21047.5	chr2	-	5452	25	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5537	4	intron_retention	FALSE	canonical	3	156	junction_24	56.1587531517176	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGTTGATTTATAAACA	NA	False	NA	0	True	ATTAAA	-18	NA	179826973	179818161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810
ES.21047.53	chr2	-	2014	9	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	534	-1	intron_retention	FALSE	canonical	1	1	junction_2	110.014700722222	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179820902	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818823_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307
ES.21047.54	chr2	-	3202	13	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-1105	-1	intron_retention	FALSE	canonical	3	233	junction_12	42.2264891849759	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179822541	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179819201_179819283_179819438_179819527_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401
ES.21047.57	chr2	-	4769	27	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5800	-1	intron_retention	FALSE	canonical	3	153	junction_26	57.8538763257671	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179827236	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
ES.21047.58	chr2	-	5833	37	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-9759	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	81.3388355758767	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179831195	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820689_179821033_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125
ES.21047.59	chr2	-	4747	27	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5780	-1	intron_retention	FALSE	canonical	3	153	junction_26	59.6058677267232	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179827216	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
ES.21047.60	chr2	-	5058	23	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-5701	-1	intron_retention	FALSE	canonical	3	153	junction_22	60.81546399689	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179827137	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819438_179819527_179819998_179820069_179820216_179820307_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121
ES.21047.62	chr2	-	3791	24	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-3447	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.8200146861834	449	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179824883	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820076_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756
ES.21047.63	chr2	-	5448	30	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-7338	-1	intron_retention	FALSE	canonical	2	111	junction_26	65.1731800721235	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179828774	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820934_179821044_179821322_179821398_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593
ES.21047.66	chr2	-	2244	13	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-89	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	89.1855120272096	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179821525	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819227_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398
ES.21047.67	chr2	-	3762	24	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-3424	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.5614790502921	449	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179824860	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818788_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756
ES.21047.68	chr2	-	777	3	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	262	-1	combination_of_known_junctions	FALSE	canonical	3	300	junction_1	19.5	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179819118	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818801_179818895_179818987_179819066
ES.21047.69	chr2	-	5951	38	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-9749	-1	intron_retention	FALSE	canonical	0	0	junction_3	78.1198719281192	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179831185	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818987_179819066_179819199_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125
ES.21047.7	chr2	-	4618	27	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-4926	1	intron_retention	FALSE	canonical	3	156	junction_25	56.4034625862276	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGTGTTGATTTATAA	NA	False	NA	-3	True	ATTAAA	-15	NA	179826362	179818164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193
ES.21047.70	chr2	-	5258	32	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-7247	-1	intron_retention	FALSE	canonical	1	1	junction_9	74.8058465109275	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179828683	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820505_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827527_179827606_179827759_179828354_179828505_179828593
ES.21047.71	chr2	-	7727	51	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-14429	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.5738139142371	450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	179835865	179818166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818765_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767
ES.21047.75	chr2	-	10592	75	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	76.3663235738568	453	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTGTGTTGATTTA	NA	False	NA	-6	True	ATTAAA	-12	NA	179867609	179818167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819129_179820325_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ES.21047.80	chr2	-	9422	66	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-19349	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	88.2656640807812	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179840785	179818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820609_179821033_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827414_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722
ES.21047.82	chr2	-	5101	8	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-3211	-3	intron_retention	FALSE	canonical	3	215	junction_5	42.0432236283236	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179824647	179818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179819438_179819527_179819693_179819801_179821548_179821628_179821752_179821866_179822556_179822634_179823545_179824150_179824262_179824559
ES.21047.83	chr2	-	7137	47	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-12796	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	82.7153801960856	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179834232	179818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820505_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181
ES.21047.84	chr2	-	7017	45	NIC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-12518	-3	intron_retention	FALSE	canonical	2	96	junction_44	76.1249245137978	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179833954	179818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886
ES.21047.85	chr2	-	3546	24	NNC	ENSMUSG00000015647.10	novel	11388	79	NA	NA	-3393	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	72.4550052672676	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGTGTGTTGATTT	NA	False	NA	-7	True	ATTAAA	-11	NA	179824829	179818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819631_179819935_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756
ES.21048.1	chr2	+	182	1	Intergenic	novelGene_17474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCGGAGTGAGCGGGGCT	NA	False	NA	NA	False	NA	NA	NA	179871367	179871549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179871400_179871500
ES.21049.1	chr2	-	3921	1	Intergenic	novelGene_17475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGCATTCTTCTTGGA	NA	False	NA	NA	False	TATAAA	-20	NA	179878550	179874629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179874600_179878600
ES.2105.1	chr1	+	4475	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	-111	-3	-111	3	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGGTTTTCCTTTTA	NA	False	NA	11	True	AATAAA	-24	NA	182236625	182290000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.10	chr1	+	4388	19	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	38.5342560443158	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236767	182289995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182274888_182274949_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.12	chr1	+	5972	17	NIC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	51	-2	intron_retention	FALSE	canonical	3	97	junction_1	10.9594422759555	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236787	182289995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.13	chr1	+	5249	8	NNC	ENSMUSG00000026510.11	novel	2685	11	NA	NA	-86	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	43.4229319646677	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCTATTTCCTGGTTT	NA	False	NA	3	True	AATAAA	-16	NA	182272250	182289992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182272375_182273838_182274302_182275965_182277969_182278940_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.14	chr1	+	3371	3	NIC	ENSMUSG00000026510.11	novel	2685	11	NA	NA	8663	-4	intron_retention	FALSE	canonical	3	117	junction_1	6.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTATTTCCTGGTTTT	NA	False	NA	4	True	AATAAA	-17	NA	182280999	182289993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_182283429_182286324_182286525_182289251
ES.2105.2	chr1	+	4299	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	-96	158	-96	-158	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATTTAGAATCTTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	182236640	182289839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.3	chr1	+	4371	18	NIC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	-54	4	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	27.8886813369296	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGGTTTTCCTTTTAA	NA	False	NA	12	True	AATAAA	-25	NA	182236682	182290001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273886_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.4	chr1	+	4573	18	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	-54	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.3669069687888	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTATTTCCTGGTTTTC	NA	False	NA	5	True	AATAAA	-18	NA	182236682	182289994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276906_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.5	chr1	+	5083	18	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.1598350413183	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236738	182289995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182263688_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273886_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.6	chr1	+	4286	18	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.6751734106983	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236740	182289995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272294_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.7	chr1	+	7250	17	NIC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	5	-2	intron_retention	FALSE	canonical	3	97	junction_1	10.9829413182444	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTCCTGGTTTTCC	NA	False	NA	6	True	AATAAA	-19	NA	182236741	182289995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182286525_182289251
ES.2105.8	chr1	+	3629	14	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.7696688249141	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	False	NA	8	True	AATAAA	-21	NA	182236741	182289997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269290_182273835_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.2105.9	chr1	+	4344	18	NNC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.7717964119012	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	False	NA	8	True	AATAAA	-21	NA	182236741	182289997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270433_182271907_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ES.21050.1	chr2	+	203	1	Intergenic	novelGene_17476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179885352	179885555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179885400_179885600
ES.21051.1	chr2	+	2916	2	Intergenic	novelGene_17478	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACGATAGATTCCATTC	NA	False	NA	NA	False	NA	NA	NA	179889891	179897649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179891517_179896358
ES.21052.1	chr2	-	1694	1	Intergenic	novelGene_17477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCGTCTGTTCGTGA	NA	False	NA	NA	False	NA	NA	NA	179890026	179888332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179888300_179890000
ES.21053.1	chr2	-	151	1	Intergenic	novelGene_17479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179895319	179895168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179895200_179895300
ES.21054.1	chr2	+	530	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	-139	3	-139	0	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGCTTTTGCTGTTTT	NA	False	NA	23	True	AATAAA	-24	NA	179899030	179900235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ES.21054.10	chr2	+	511	5	NIC	ENSMUSG00000039001.13	novel	394	6	NA	NA	8	-4	intron_retention	FALSE	canonical	3	3954	junction_4	1482.42763314099	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTCTGCTTTTGCTG	NA	False	NA	19	True	AATAAA	-20	NA	179899218	179900231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ES.21054.11	chr2	+	422	3	NIC	ENSMUSG00000039001.13	novel	394	6	NA	NA	373	-4	intron_retention	FALSE	canonical	3	3954	junction_2	1742.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTCTGCTTTTGCTG	NA	False	NA	19	True	AATAAA	-20	NA	179899583	179900231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_179899645_179899778_179900079_179900170
ES.21054.2	chr2	+	491	5	FSM	ENSMUSG00000039001.13	ENSMUST00000148629.2	481	5	-16	6	-14	-6	multi-exon	FALSE	canonical	3	5195	junction_1	969.972422288386	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTAAGTCTGCTTTTGC	NA	False	NA	17	True	AATAAA	-18	NA	179899155	179900229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022
ES.21054.3	chr2	+	422	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2882.90848970272	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTTTGCTGTTTTTA	NA	False	NA	25	True	AATAAA	-26	NA	179899161	179900237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179899241_179899392_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ES.21054.4	chr2	+	384	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2898.90354444573	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTCTGCTTTTGCTG	NA	False	NA	19	True	AATAAA	-20	NA	179899164	179900231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179899233_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ES.21054.6	chr2	+	374	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2798.83568649537	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTCTGCTTTTGCTG	NA	False	NA	19	True	AATAAA	-20	NA	179899176	179900231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900028_179900079_179900170
ES.21054.8	chr2	+	366	6	NNC	ENSMUSG00000039001.13	novel	394	6	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	3	245	junction_1	2812.11261509919	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTCTGCTTTTGCTG	NA	False	NA	19	True	AATAAA	-20	NA	179899200	179900231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_179899251_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ES.21055.1	chr2	+	4038	2	Antisense	novelGene_ENSMUSG00000038990.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAAATGCCATGATT	NA	False	NA	NA	False	NA	NA	NA	179903448	179907582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_179906102_179906197
ES.21056.1	chr2	-	3395	1	Genic_Genomic	ENSMUSG00000038990.15	novel	NA	NA	NA	NA	407	576	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGGAAGATTCGACCT	NA	False	NA	NA	False	ATTAAA	-44	NA	179903151	179899756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_179899800_179903200
ES.21056.10	chr2	-	2746	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	41.2308667747842	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915226	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.11	chr2	-	3724	8	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	10	junction_1	39.9892842789522	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915257	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902056_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.13	chr2	-	3433	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	108	junction_7	11.5697612334914	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915312	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.14	chr2	-	3745	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_6	11.3999641961486	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.16	chr2	-	6735	6	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	5681	0	intron_retention	FALSE	canonical	3	109	junction_2	11.3384302264467	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179909558	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006
ES.21056.18	chr2	-	2899	10	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.0664055693934	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915268	179900333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903362_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.19	chr2	-	3420	9	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	10	junction_1	38.6999677002449	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915289	179900333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902056_179902273_179902436_179902544_179902869_179902974_179903308_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.2	chr2	-	4760	6	NIC	ENSMUSG00000038990.15	novel	4561	7	NA	NA	2	1	intron_retention	FALSE	canonical	3	108	junction_4	11.61034021896	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915287	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902544_179902869_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.20	chr2	-	4457	6	NIC	ENSMUSG00000038990.15	novel	4561	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	2	junction_2	48.2965837301149	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCCTTGCTTGTCTCCT	NA	False	NA	-2	True	AGTAAA	-17	NA	179915257	179900333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902869_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.21	chr2	-	4499	6	NIC	ENSMUSG00000038990.15	novel	4561	7	NA	NA	-9	1	intron_retention	FALSE	canonical	3	19	junction_5	44.2736942212868	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTCCTTGCTTGTCTCC	NA	False	NA	-3	True	AGTAAA	-16	NA	179915265	179900334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904949_179906006_179906100_179914892
ES.21056.22	chr2	-	3646	7	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	19	junction_6	40.5490101262931	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCCTTGCTTGTCTC	NA	False	NA	-4	True	AGTAAA	-15	NA	179915265	179900335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179914892
ES.21056.23	chr2	-	4321	7	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	108	junction_5	12.8582010146573	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCCTTGCTTGTCTC	NA	False	NA	-4	True	AGTAAA	-15	NA	179915260	179900335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179902273_179902436_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.24	chr2	-	4155	7	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	19	junction_6	41.8170619085878	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCCTTGCTTGTCTC	NA	False	NA	-4	True	AGTAAA	-15	NA	179915257	179900335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179914892
ES.21056.25	chr2	-	2982	10	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.7790178416966	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCCTTGCTTGTCTC	NA	False	NA	-4	True	AGTAAA	-15	NA	179915288	179900335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902056_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.26	chr2	-	4389	7	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	108	junction_5	11.2348663642351	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	False	NA	-6	True	AGTAAA	-13	NA	179915257	179900337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.27	chr2	-	2905	11	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	61	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.3708113939484	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	False	NA	-6	True	AGTAAA	-13	NA	179915178	179900337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904289_179904336_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.28	chr2	-	2733	2	ISM	ENSMUSG00000038990.15	ENSMUST00000141067.2	875	3	324	-1856	324	-2	intron_retention	FALSE	canonical	3	109	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	False	NA	-6	True	AGTAAA	-13	NA	179903234	179900337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_179902273_179902436
ES.21056.29	chr2	-	2924	9	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.2304835127392	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	False	NA	-6	True	AGTAAA	-13	NA	179915261	179900337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902067_179902362_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.3	chr2	-	2903	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915288	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
ES.21056.31	chr2	-	3332	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	19	junction_7	38.7403707588171	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	False	NA	-6	True	AGTAAA	-13	NA	179915288	179900337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904019_179904870_179904949_179906006_179906100_179914892
ES.21056.32	chr2	-	2839	10	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	72	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.5105515557717	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACATACTTCCTTGCTTG	NA	False	NA	-8	True	AGTAAA	-11	NA	179915167	179900339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906093_179906195_179906268_179914892
ES.21056.34	chr2	-	2606	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	32	337	-1	-334	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTAGTAAGGTGTATTC	NA	False	NA	NA	False	GATAAA	-17	NA	179915257	179900669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.35	chr2	-	3852	7	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	-335	intron_retention	FALSE	canonical	3	19	junction_6	41.8170619085878	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTAGTAAGGTGTATT	NA	False	NA	NA	False	GATAAA	-16	NA	179915289	179900670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179914892
ES.21056.36	chr2	-	3407	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	-335	intron_retention	FALSE	canonical	3	108	junction_6	11.3999641961486	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTAGTAAGGTGTATT	NA	False	NA	NA	False	GATAAA	-16	NA	179915289	179900670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.38	chr2	-	2560	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	3	-337	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATGTAGTAAGGTGTA	NA	False	NA	NA	False	GATAAA	-14	NA	179915286	179900672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
ES.21056.4	chr2	-	2996	10	NNC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.4851536915411	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915283	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_179901977_179902067_179902299_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.5	chr2	-	2866	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_5	37.5091655465701	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915288	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.6	chr2	-	4285	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	-22	1	intron_retention	FALSE	canonical	3	108	junction_6	11.9249352884053	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915311	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.7	chr2	-	4551	7	FSM	ENSMUSG00000038990.15	ENSMUST00000136706.8	4561	7	14	-4	-3	1	multi-exon	FALSE	canonical	3	108	junction_5	11.9826263120125	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGCTTGTCTCCTTT	NA	False	NA	0	True	AGTAAA	-19	NA	179915242	179900331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.8	chr2	-	2997	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	-22	0	-22	0	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915311	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21056.9	chr2	-	2694	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	43.9396617823922	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915283	179900332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ES.21057.1	chr2	-	228	1	Intergenic	novelGene_17480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGGAAATCAAGGG	NA	False	NA	NA	False	NA	NA	NA	179939637	179939409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_179939400_179939600
ES.21058.1	chr2	+	123	1	Intergenic	novelGene_17481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	179958551	179958674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_179958600_179958700
ES.21059.1	chr2	+	3265	11	NIC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	51	junction_3	7.15262189689907	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098034	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114961_180115306_180115456_180115896
ES.21059.10	chr2	+	8060	8	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_7	6.86011840202455	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098126	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180113052_180113846_180114043_180114197_180114961_180115306_180115456_180115896
ES.21059.11	chr2	+	4272	11	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	55	junction_10	6.52763356814704	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098128	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ES.21059.12	chr2	+	4205	7	ISM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	91	15	2	0	intron_retention	FALSE	canonical	3	51	junction_3	3.72677996249965	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098128	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846
ES.21059.13	chr2	+	7968	9	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	55	junction_8	6.53356717268599	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098128	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180113052_180113846_180114043_180114197_180114364_180114453_180114961_180115306_180115456_180115896
ES.21059.14	chr2	+	2991	12	NNC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.4298909198437	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098128	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115807
ES.21059.15	chr2	+	4543	10	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	55	junction_9	6.51494009523069	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098128	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114961_180115306_180115456_180115896
ES.21059.16	chr2	+	2989	12	NNC	ENSMUSG00000038963.16	novel	2065	3	NA	NA	1666	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.4256369754206	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180099792	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180099916_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ES.21059.17	chr2	+	1635	2	NIC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	346	-2	intron_retention	FALSE	canonical	3	55	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180114567	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180115456_180115896
ES.21059.2	chr2	+	2852	11	NNC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	19.6338992561335	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098037	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114370_180114871_180114961_180115306_180115456_180115896
ES.21059.3	chr2	+	2968	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	27	15	27	0	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098064	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ES.21059.4	chr2	+	3054	13	FSM	ENSMUSG00000038963.16	ENSMUST00000139902.8	3002	13	-45	-7	44	0	multi-exon	FALSE	canonical	1	2	junction_3	23.5743504682526	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098081	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180107997_180108101_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ES.21059.5	chr2	+	2770	11	NIC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	18.7946800983683	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098087	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114895_180114961_180115306_180115456_180115896
ES.21059.6	chr2	+	3034	11	NIC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	-38	0	intron_retention	FALSE	canonical	3	51	junction_3	7.4222638056054	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098088	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114627_180114895_180114961_180115306_180115456_180115896
ES.21059.7	chr2	+	3293	10	NIC	ENSMUSG00000038963.16	novel	3010	12	NA	NA	-28	0	intron_retention	FALSE	canonical	3	51	junction_3	7.31479137361457	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098098	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114961_180115306_180115456_180115896
ES.21059.8	chr2	+	4656	9	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	-21	0	intron_retention	FALSE	canonical	3	55	junction_8	6.74536878161602	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098105	180116645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114961_180115306_180115456_180115896
ES.21059.9	chr2	+	8763	8	NIC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	55	junction_7	6.97809985246846	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCCTTGTGTGATGTT	NA	False	NA	8	True	AATATA	-17	NA	180098126	180116643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180098167_180105733_180106622_180107389_180108973_180109359_180114043_180114197_180114364_180114453_180114961_180115306_180115456_180115896
ES.2106.1	chr1	-	4470	1	Antisense	novelGene_ENSMUSG00000026510.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGACAAAATATTGCTTCC	5072	False	NA	NA	False	NA	NA	NA	182277700	182273230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_182273200_182277700
ES.21060.1	chr2	+	1853	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	-28	0	-17	0	multi-exon	TRUE	canonical	3	65	junction_2	3.55902608401044	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	180224487	180228097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
ES.21060.2	chr2	+	1480	5	NNC	ENSMUSG00000027569.16	novel	1510	5	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.0802421641979	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224522	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227108
ES.21060.3	chr2	+	1788	4	NNC	ENSMUSG00000027569.16	novel	1825	4	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_3	32.4174164437712	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224523	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180224749_180225193_180225316_180226198_180226665_180227108
ES.21060.4	chr2	+	1493	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	20	-3	0	3	multi-exon	FALSE	canonical	3	47	junction_3	10.4253297309965	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224524	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ES.21060.5	chr2	+	1906	4	ISM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	36	-3	-10	3	intron_retention	FALSE	canonical	3	47	junction_3	10.5303793326209	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224540	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589
ES.21060.6	chr2	+	1569	5	NIC	ENSMUSG00000027569.16	novel	1510	5	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	27.8836869871974	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224551	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180224749_180225193_180225316_180226198_180226281_180226486_180226665_180227093
ES.21060.7	chr2	+	2666	3	FSM	ENSMUSG00000027569.16	ENSMUST00000149969.2	2673	3	7	0	7	0	multi-exon	FALSE	canonical	3	72	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	180224557	180228097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180224749_180225193_180226665_180227093
ES.21060.8	chr2	+	1928	4	NNC	ENSMUSG00000027569.16	novel	1825	4	NA	NA	34	3	intron_retention	FALSE	canonical	0	0	junction_2	34.1792659696229	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	180224584	180228083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180224749_180225193_180225316_180226012_180226665_180227093
ES.21061.1	chr2	+	2281	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	163	5	-54	-5	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231200	180237624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
ES.21061.3	chr2	+	2184	8	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	-15	-9	at_least_one_novel_splicesite	TRUE	canonical	1	11	junction_7	27.7061843829356	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTGGTGTGGCCGTG	NA	False	NA	13	True	AATAAA	-13	NA	180231239	180237620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000_180237055_180237108
ES.21061.4	chr2	+	2544	7	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	310	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5303277300156	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	180231564	180237624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180232042_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
ES.21061.5	chr2	+	1302	2	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	5014	-5	at_least_one_novel_splicesite	TRUE	canonical	3	58	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTGGCCGTGTTCT	1125	False	NA	17	True	AATAAA	-17	NA	180236268	180237624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180236947_180237000
ES.21062.1	chr2	+	2437	32	FSM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	24	385	24	198	multi-exon	TRUE	canonical	0	0	junction_1	6.14327716438208	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGTACTGGTTATAGT	4895	False	NA	NA	False	AATAAA	-19	NA	180240038	180263593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180240119_180240658_180240728_180241837_180241874_180242314_180242387_180243374_180243429_180244434_180244471_180244894_180244919_180245149_180245204_180245541_180245596_180245926_180245969_180247010_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21062.2	chr2	+	2982	21	NNC	ENSMUSG00000027570.16	novel	644	7	NA	NA	1719	197	intron_retention	FALSE	canonical	0	0	junction_1	4.73787927241714	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTAGTACTGGTTATAG	NA	False	NA	NA	False	AATAAA	-18	NA	180246696	180263592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180246751_180247010_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180258357_180261485_180261564_180263022
ES.21062.3	chr2	+	2161	22	ISM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	6751	385	1788	198	3prime_fragment	FALSE	canonical	2	8	junction_11	3.68363421063118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGTACTGGTTATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	180246765	180263593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21062.4	chr2	+	1938	23	NNC	ENSMUSG00000027570.16	novel	644	7	NA	NA	1804	188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.55204068305252	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCCTTCAGATTAGTAC	NA	False	NA	NA	False	AATAAA	-9	NA	180246781	180263583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180246814_180247010_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21062.5	chr2	+	4861	19	NNC	ENSMUSG00000027570.16	novel	2846	32	NA	NA	1821	196	intron_retention	FALSE	canonical	1	1	junction_7	4.70782117830675	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAGTACTGGTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	180246798	180263591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180249474_180250224_180250279_180251118_180251165_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21062.6	chr2	+	1938	22	NNC	ENSMUSG00000027570.16	novel	2846	32	NA	NA	2031	196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.56249126362037	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAGTACTGGTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	180247008	180263591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180247068_180247497_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21062.7	chr2	+	1359	12	NIC	ENSMUSG00000027570.16	novel	2846	32	NA	NA	-4028	195	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	5.34897843031115	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGATTAGTACTGGTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	180251877	180263590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
ES.21063.1	chr2	-	6215	1	Genic_Genomic	ENSMUSG00000038932.14	novel	NA	NA	NA	NA	14181	4	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGAGTCGCTTTATTT	6903	False	NA	NA	False	AATAAA	-23	NA	180269959	180263744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_180263700_180270000
ES.21063.10	chr2	-	8485	3	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	14	4469	intron_retention	FALSE	canonical	3	92	junction_1	1	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTAGTGTTTGGCTTT	5383	False	NA	NA	False	AATAAA	-19	NA	180284487	180272577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180277189_180280196_180282257_180282673
ES.21063.11	chr2	-	6893	1	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	4667	4466	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGACTTAGTGTTTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	180279473	180272580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180272600_180279500
ES.21063.12	chr2	-	2208	3	NNC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-51	-1907	intron_retention	FALSE	canonical	0	0	junction_1	47	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTTTTGCGTTT	5437	False	NA	NA	False	AATAAA	-15	NA	180284433	180281165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180281451_180282093_180282257_180282673
ES.21063.13	chr2	-	3364	1	Genic_Genomic	ENSMUSG00000038932.14	novel	NA	NA	NA	NA	-30	-1909	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTTTTGCGT	5339	False	NA	NA	False	AATAAA	-13	NA	180284531	180281167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_180281200_180284500
ES.21063.3	chr2	-	2275	6	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-43	4	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	22.1666416039959	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGAGTCGCTTTATTT	5326	False	NA	NA	False	AATAAA	-23	NA	180284544	180263744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180264508_180277046_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ES.21063.4	chr2	-	2114	5	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-28	3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	37.9242666376029	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTGAGTCGCTTTATT	5341	False	NA	NA	False	AATAAA	-22	NA	180284529	180263745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180264508_180280196_180280441_180282093_180282257_180282673_180282858_180283768
ES.21063.6	chr2	-	2240	7	NNC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.6269811006702	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGGTTCCCAGTGAGT	5379	False	NA	NA	False	AATAAA	-13	NA	180284491	180263754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180264508_180267286_180267315_180277046_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ES.21063.7	chr2	-	2531	3	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	513	-6	intron_retention	FALSE	canonical	3	6	junction_1	11.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGGTTCCCAGTGAGT	6243	False	NA	NA	False	AATAAA	-13	NA	180283627	180263754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180264508_180280196_180280441_180282093
ES.21063.8	chr2	-	1875	6	FSM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	-7	357	-7	-357	multi-exon	FALSE	canonical	3	29	junction_3	24.9591666527551	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAACATCCTTGGT	5362	False	NA	NA	False	NA	NA	NA	180284508	180264105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180264508_180277046_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
ES.21063.9	chr2	-	5968	5	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	-27	4472	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	24.1699710384601	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTGTTTGGCTTTGTG	5342	False	NA	NA	False	AATAAA	-22	NA	180284528	180272574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ES.21064.1	chr2	+	719	1	Antisense	novelGene_ENSMUSG00000038914.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGATATAAAATGCACTA	NA	False	NA	NA	False	NA	NA	NA	180323735	180324454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_180323700_180324500
ES.21065.1	chr2	+	5952	1	FSM	ENSMUSG00000119719.1	ENSMUST00000082488.3	107	1	-5821	-24	-5821	24	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTACCTAAGTAGAGTG	1638	False	NA	NA	False	NA	NA	NA	180334034	180339986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180334000_180340000
ES.21066.1	chr2	+	1483	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	-41	213	-41	-210	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGATCGGTTTTTTGT	NA	False	NA	52	True	TATAAA	-43	NA	180351868	180360313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ES.21066.10	chr2	+	2334	4	NNC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	227	-8	intron_retention	FALSE	canonical	0	0	junction_1	81.6183530558878	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCACAATGGCTTC	NA	False	NA	7	True	AATAAA	-18	NA	180352136	180360515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180352280_180354983_180355114_180356482_180356680_180358651
ES.21066.11	chr2	+	226	1	Intergenic	novelGene_17484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCCAGAAACATAGAACC	NA	False	NA	NA	False	NA	NA	NA	180357092	180357318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180357100_180357300
ES.21066.2	chr2	+	5279	4	ISM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	21	-2864	21	2864	intron_retention	FALSE	canonical	3	169	junction_3	8.65383665716478	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTGTCTGAAAGCTCT	NA	False	NA	20	True	AGTAAA	-21	NA	180351930	180363390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651
ES.21066.3	chr2	+	1628	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	27	0	27	0	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTCTAAAAAGTTCT	NA	False	NA	18	True	AATAAA	-29	NA	180351936	180360526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ES.21066.4	chr2	+	1482	5	NNC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	66	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1884997883539	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAAGATAACTTTTGT	NA	False	NA	22	True	TATAAA	-13	NA	180351975	180360283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180352280_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ES.21066.5	chr2	+	1697	6	NNC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	107	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.5870526359697	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCACAATGGCTTCTA	NA	False	NA	9	True	AATAAA	-20	NA	180352016	180360517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180352144_180354983_180355114_180356482_180356680_180356893_180357052_180358651_180358850_180359630
ES.21066.6	chr2	+	4404	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	117	-2866	117	2866	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCTGAAAGCTCTTT	NA	False	NA	22	True	AGTAAA	-23	NA	180352026	180363392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ES.21066.7	chr2	+	2095	4	ISM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	128	213	128	-210	intron_retention	FALSE	canonical	3	169	junction_3	8.65383665716478	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGATCGGTTTTTTGT	NA	False	NA	52	True	TATAAA	-43	NA	180352037	180360313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651
ES.21066.8	chr2	+	2210	4	ISM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	217	9	217	-6	intron_retention	FALSE	canonical	3	169	junction_3	8.65383665716478	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCACAATGGCTTCTA	NA	False	NA	9	True	AATAAA	-20	NA	180352126	180360517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651
ES.21066.9	chr2	+	2165	6	NNC	ENSMUSG00000027573.12	novel	1655	5	NA	NA	223	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.7008551839718	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACCACAATGGCTT	NA	False	NA	6	True	AATAAA	-17	NA	180352132	180360514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180352731_180354983_180355114_180356482_180356680_180356893_180357052_180358651_180358850_180359630
ES.21067.1	chr2	+	2316	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	-43	2	-43	-2	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367012	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.10	chr2	+	5257	9	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	24	0	intron_retention	FALSE	canonical	3	17	junction_4	69.6508031181264	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367079	180384073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180374366_180375509_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.11	chr2	+	2514	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	26	-2	intron_retention	FALSE	canonical	3	17	junction_6	62.5275139438631	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367081	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.12	chr2	+	2214	12	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	73.3213238350592	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367081	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373938_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.13	chr2	+	3393	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	26	-3	intron_retention	FALSE	canonical	3	39	junction_2	56.1819365988749	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367081	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.14	chr2	+	3804	10	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	40	-3	intron_retention	FALSE	canonical	3	189	junction_6	17.1773609263781	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367095	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.15	chr2	+	2134	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	50	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	63.3091587906273	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367105	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.16	chr2	+	2577	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	51	-2	intron_retention	FALSE	canonical	3	182	junction_6	18.7713514794124	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367106	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.17	chr2	+	4887	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	55	-2	intron_retention	FALSE	canonical	3	39	junction_2	56.301420941216	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367110	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.18	chr2	+	5277	10	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	55	0	intron_retention	FALSE	canonical	0	0	junction_6	86.0259794236745	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367110	180384073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180378897_180379384_180379473_180380201_180380402_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.19	chr2	+	2182	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	55	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	63.6142818831128	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367110	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.2	chr2	+	2738	2	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-107	-12	9	12	intron_retention	FALSE	canonical	3	234	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180367064	180376230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672
ES.21067.20	chr2	+	1535	3	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-61	1	55	-1	intron_retention	FALSE	canonical	3	234	junction_1	2	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	180367110	180376217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672_180374366_180375509
ES.21067.21	chr2	+	2249	14	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	57	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5643292375381	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGATTGTTGTTTTA	NA	False	NA	22	True	ATTAAA	-7	NA	180367112	180384066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180370302_180370411_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.22	chr2	+	2126	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	72.7214529710609	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367112	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377747_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.23	chr2	+	1988	10	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-55	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	78.6625862093016	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367116	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.24	chr2	+	2833	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-55	-2	intron_retention	FALSE	canonical	0	0	junction_2	82.2577250678216	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367116	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373797_180374225_180374366_180375509_180376305_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.25	chr2	+	2126	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-55	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	66.8999252615427	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367116	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180383075
ES.21067.26	chr2	+	2224	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-55	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	64.7299947645774	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367116	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381598_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.27	chr2	+	2137	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-50	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367121	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.28	chr2	+	2282	14	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.3641520730295	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367131	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180370302_180370411_180370508_180370586_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.29	chr2	+	2258	3	ISM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	83	7894	-33	-39	intron_retention	FALSE	canonical	3	124	junction_2	55	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	180367138	180376179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672_180373871_180374225
ES.21067.3	chr2	+	2191	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.1230950442447	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTGTTGTTTTATTC	NA	False	NA	25	True	ATTAAA	-10	NA	180367064	180384069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375490_180375610_180377635_180377747_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.30	chr2	+	2066	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	65.8692644561938	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367138	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.31	chr2	+	2084	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	75.3240931459813	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTTTTATTCA	NA	False	NA	26	True	ATTAAA	-11	NA	180367138	180384070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.32	chr2	+	2523	12	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	12	junction_4	61.0294604377453	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367140	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377747_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.33	chr2	+	1156	4	ISM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	97	7838	-19	17	5prime_fragment	FALSE	canonical	3	124	junction_2	52.8225541054408	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	180367152	180376235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509
ES.21067.34	chr2	+	2151	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	61.6945882733828	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGATTGTTGTTTTA	NA	False	NA	22	True	ATTAAA	-7	NA	180367152	180384066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377747_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.35	chr2	+	1434	4	NNC	ENSMUSG00000023393.16	novel	1158	5	NA	NA	7	17	intron_retention	FALSE	non_canonical	0	0	junction_3	111.263451121901	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	180367178	180376235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180374366_180375509_180376076_180376126
ES.21067.36	chr2	+	4093	11	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_10	79.5964823343344	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367192	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382386_180383055
ES.21067.37	chr2	+	3109	2	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	2667	12	intron_retention	FALSE	canonical	1	2	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180369859	180376230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180370411_180373672
ES.21067.38	chr2	+	1857	9	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-4187	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.7769984047815	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180374023	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180374366_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.39	chr2	+	1894	9	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-4186	-7	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	79.4103267843673	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGATTGTTGTTTTA	NA	False	NA	22	True	ATTAAA	-7	NA	180374024	180384066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.4	chr2	+	1323	3	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-106	258	10	-258	intron_retention	FALSE	canonical	3	234	junction_1	2	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGGAAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	180367065	180375960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672_180374366_180375509
ES.21067.40	chr2	+	1624	2	NNC	ENSMUSG00000023393.16	novel	1158	5	NA	NA	-3686	12	intron_retention	TRUE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180374524	180376230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180376035_180376116
ES.21067.41	chr2	+	5111	8	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-3563	0	intron_retention	TRUE	non_canonical	0	0	junction_1	95.2661149258288	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180374647	180384073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180376018_180376167_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.42	chr2	+	3177	9	ISM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	9050	1	-2105	-1	3prime_fragment	FALSE	canonical	3	182	junction_3	17.4212513901843	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTGTTTTATTCAAT	NA	False	NA	28	True	ATTAAA	-13	NA	180376105	180384072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.43	chr2	+	3565	6	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	-1276	-2	intron_retention	FALSE	canonical	3	16	junction_3	79.5150300257756	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180376934	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382375_180382505
ES.21067.44	chr2	+	3822	6	NNC	ENSMUSG00000023393.16	novel	621	8	NA	NA	-786	-2	intron_retention	FALSE	canonical	1	5	junction_1	87.1816494452818	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180377424	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180378612_180378799_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.45	chr2	+	3511	5	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	32	0	intron_retention	FALSE	canonical	3	189	junction_2	15.7062885494951	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180378242	180384073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180378577_180378799_180380237_180381611_180381728_180382318_180382375_180382505
ES.21067.46	chr2	+	2164	7	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	108	-2	intron_retention	FALSE	canonical	3	189	junction_3	15.6276108929747	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180378318	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180378577_180378799_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.47	chr2	+	1803	5	ISM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	12387	2	-624	-2	intron_retention	FALSE	canonical	3	189	junction_2	15.6284996080878	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180379442	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505
ES.21067.48	chr2	+	1539	4	NNC	ENSMUSG00000023393.16	novel	506	5	NA	NA	1206	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.792633953221	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180381272	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180381728_180382318_180382375_180382505_180382538_180383075
ES.21067.5	chr2	+	2163	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	10	-2	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	52.1550453966879	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367065	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.6	chr2	+	4231	13	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	10	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	64.9683683717614	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367065	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180376068_180376125_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21067.7	chr2	+	2227	11	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.0080948480562	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367067	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180381611_180381728_180382318_180382386_180383055
ES.21067.8	chr2	+	2489	2	ISM	ENSMUSG00000023393.16	ENSMUST00000151882.8	1158	5	-103	233	13	-233	intron_retention	FALSE	canonical	3	234	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAGGAAGAGGGGGAA	NA	False	NA	NA	False	NA	NA	NA	180367068	180375985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180367245_180373672
ES.21067.9	chr2	+	2089	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	39	junction_2	65.9963685452239	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTTTTATTCAA	NA	False	NA	27	True	ATTAAA	-12	NA	180367069	180384071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ES.21068.1	chr2	-	8566	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-122	21	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGACCCCTAGTTGTCAC	NA	False	NA	2	True	AATAAA	-35	NA	180351914	180299735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.10	chr2	-	8467	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	871	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	51.1935759858815	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGTCTCTCTCTTCA	NA	False	NA	-23	True	AATAAA	-10	NA	180350921	180299760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180350783
ES.21068.11	chr2	-	8349	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-62	-136	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTCTTTAGGTTTAC	NA	False	NA	NA	False	AGTAAA	-36	NA	180351854	180299892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.12	chr2	-	8085	16	FSM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	248	390	-110	-390	multi-exon	FALSE	canonical	3	16	junction_15	49.7552230647419	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGCTTCGTTTGTTCTT	NA	False	NA	NA	False	CATAAA	-20	NA	180343895	180300146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ES.21068.13	chr2	-	8088	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-57	-392	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTAGCTTCGTTTGTTC	NA	False	NA	NA	False	CATAAA	-18	NA	180351849	180300148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.15	chr2	-	8936	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-57	-393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	48.5658316102999	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTAGCTTCGTTTGTT	NA	False	NA	NA	False	CATAAA	-17	NA	180351849	180300149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180332298_180333656_180333842_180351702
ES.21068.16	chr2	-	7445	16	FSM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	249	1029	-109	-1029	multi-exon	FALSE	canonical	3	16	junction_15	49.7552230647419	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTGTAAGTTTTAAGGG	NA	False	NA	NA	False	TATAAA	-19	NA	180343894	180300785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ES.21068.17	chr2	-	7454	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-62	-1031	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGTGTAAGTTTTAAG	NA	False	NA	NA	False	TATAAA	-17	NA	180351854	180300787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.18	chr2	-	7392	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	914	-1036	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	51.1935759858815	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGACTGGTGTAAGTT	NA	False	NA	NA	False	TATAAA	-12	NA	180350878	180300792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180350783
ES.21068.19	chr2	-	7542	17	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-103	-1038	combination_of_known_junctions	FALSE	canonical	3	16	junction_16	48.8147006546184	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTGACTGGTGTAAG	NA	False	NA	NA	False	TATAAA	-10	NA	180343888	180300794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180343753
ES.21068.2	chr2	-	8666	16	FSM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	57	0	57	0	multi-exon	FALSE	canonical	3	16	junction_15	49.7552230647419	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180344086	180299756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ES.21068.20	chr2	-	7306	17	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-78	-1249	combination_of_known_junctions	FALSE	canonical	3	16	junction_16	48.8147006546184	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGTTTTTGAAATAG	NA	False	NA	NA	False	CATAAA	-10	NA	180343863	180301005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180343753
ES.21068.21	chr2	-	5342	17	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-56	-3249	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	46.571811149557	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCTGGTAACCCTGTC	NA	False	NA	NA	False	NA	NA	NA	180351848	180303005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.22	chr2	-	5229	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-57	-3251	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACCCTGGTAACCCTG	NA	False	NA	NA	False	NA	NA	NA	180351849	180303007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.23	chr2	-	4716	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	2	-3705	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGCAGCTGGAGGAG	NA	False	NA	NA	False	AATAAA	-14	NA	180351790	180303461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.24	chr2	-	4028	16	NNC	ENSMUSG00000038914.16	novel	4906	15	NA	NA	-57	2353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.1390628445779	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATTGTTTGTTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	180351849	180307727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180307896_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.25	chr2	-	7197	15	FSM	ENSMUSG00000038914.16	ENSMUST00000103057.8	4906	15	62	-2353	62	2353	multi-exon	FALSE	canonical	3	75	junction_9	45.219194046379	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATTGTTTGTTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	180351730	180307727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.26	chr2	-	6235	10	NIC	ENSMUSG00000038914.16	novel	4906	15	NA	NA	-11579	2353	intron_retention	FALSE	canonical	0	0	junction_6	51.2924319977803	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATTGTTTGTTTGAC	5618	False	NA	NA	False	AATAAA	-16	NA	180329327	180307727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180311380_180312057_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316760_180317221_180325601_180325822_180326756_180326970_180329268
ES.21068.27	chr2	-	8139	14	NIC	ENSMUSG00000038914.16	novel	4906	15	NA	NA	-68	2353	intron_retention	FALSE	canonical	3	75	junction_8	46.3583928940162	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATTGTTTGTTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	180351860	180307727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.28	chr2	-	3112	9	FSM	ENSMUSG00000038914.16	ENSMUST00000037764.12	3570	9	460	-2	460	0	multi-exon	FALSE	canonical	3	76	junction_6	8.15092019345055	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAG	NA	False	NA	NA	False	AGTAAA	-41	NA	180317288	180310080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760
ES.21068.29	chr2	-	4135	1	Genic_Genomic	ENSMUSG00000038914.16	novel	NA	NA	NA	NA	-3982	5255	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAGGTTTTTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	180321730	180317595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_180317600_180321700
ES.21068.30	chr2	-	5267	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-37	-617	-37	617	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTTGTTGGTTACATTC	NA	False	NA	NA	False	AATATA	-18	NA	180351829	180322233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.31	chr2	-	4920	7	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-8	187	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	68.3091420593824	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTTTGAATGGATC	NA	False	NA	NA	False	ACTAAA	-23	NA	180351800	180322663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.32	chr2	-	4847	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-47	-187	-47	187	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTTTGAATGGATC	NA	False	NA	NA	False	ACTAAA	-23	NA	180351839	180322663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.33	chr2	-	5766	5	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-37	181	intron_retention	FALSE	canonical	3	159	junction_4	14.0267601391055	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACACTGGTGTTTGAA	NA	False	NA	NA	False	ACTAAA	-17	NA	180351829	180322669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.34	chr2	-	4738	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	334	-174	-24	159	multi-exon	FALSE	canonical	3	16	junction_5	68.2864554651945	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATGGCTCATCAAGTG	NA	False	NA	NA	False	NA	NA	NA	180343809	180322691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ES.21068.35	chr2	-	4774	6	NNC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	917	159	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	72.6570024154589	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATGGCTCATCAAGTG	NA	False	NA	NA	False	NA	NA	NA	180350875	180322691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180350783
ES.21068.36	chr2	-	4779	1	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-9724	157	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAAATGGCTCATCAAG	7473	False	NA	NA	False	NA	NA	NA	180327472	180322693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180322700_180327500
ES.21068.37	chr2	-	3845	5	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-57	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.9011849038451	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCTGTGTTTTATTT	NA	False	NA	0	True	TTTAAA	-38	NA	180351849	180322843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180333656_180333842_180351702
ES.21068.38	chr2	-	4746	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-126	-7	-126	7	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTCTGTGTTTTATTT	NA	False	NA	0	True	TTTAAA	-38	NA	180351918	180322843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.39	chr2	-	4785	7	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	68.3091420593824	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351852	180322850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.4	chr2	-	8424	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.2668752603342	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180351789	180299756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312157_180312658_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.40	chr2	-	4699	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	213	-14	-145	-1	multi-exon	FALSE	canonical	3	16	junction_5	68.2864554651945	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	-8	True	TTTAAA	-30	NA	180343930	180322851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ES.21068.41	chr2	-	3494	4	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-36	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	77.9358710735949	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	-8	True	TTTAAA	-30	NA	180351828	180322851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180333656_180333842_180351702
ES.21068.42	chr2	-	3900	6	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.5961831134312	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATCCTTCTGTG	NA	False	NA	-8	True	TTTAAA	-30	NA	180351800	180322851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180332314_180332427_180333656_180333842_180351702
ES.21068.43	chr2	-	5613	6	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	26	junction_4	61.2196047030688	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGTATCCTTCTGT	NA	False	NA	-9	True	TTTAAA	-29	NA	180351816	180322852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180332427_180333656_180333842_180351702
ES.21068.44	chr2	-	4732	7	NIC	ENSMUSG00000038914.16	novel	4898	6	NA	NA	-67	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	77.8995079145776	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGTATCCTTCTGT	NA	False	NA	-9	True	TTTAAA	-29	NA	180343852	180322852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180343753
ES.21068.45	chr2	-	5587	5	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-60	-6	intron_retention	FALSE	canonical	3	159	junction_4	14.0267601391055	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGATATCGCTGTTAC	NA	False	NA	-28	True	TTTAAA	-10	NA	180351852	180322871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.46	chr2	-	4330	5	NNC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	9942	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.9085131491118	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGATATCGCTGTTA	1102	False	NA	-29	True	TTTAAA	-9	NA	180333843	180322872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180325822_180326756_180326970_180329441_180329591_180330616_180331449_180333656
ES.21068.47	chr2	-	6895	5	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	159	junction_4	14.6969384566991	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCTGATATCGCTGT	NA	False	NA	-31	True	TTTAAA	-7	NA	180351799	180322874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.48	chr2	-	4157	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-48	504	-48	-489	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAGAGTGTCGTCAT	NA	False	NA	NA	False	CATAAA	-13	NA	180351840	180323354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.49	chr2	-	3578	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-36	1071	-36	-1056	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTAGTCATATCCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	180351828	180323921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.5	chr2	-	8598	17	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	46.571811149557	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180351855	180299756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.50	chr2	-	3713	7	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-62	-1059	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	68.3091420593824	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGAGTGTAGTCATATCCC	NA	False	NA	NA	False	AATAAA	-12	NA	180351854	180323924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.51	chr2	-	403	1	ISM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	26804	1735	-7240	-1720	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTCTTGTCTTTGTTTC	9957	False	NA	NA	False	NA	NA	NA	180324988	180324585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180324600_180325000
ES.21068.52	chr2	-	2794	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-24	1843	-24	-1828	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTACAGGCACACACCT	NA	False	NA	NA	False	NA	NA	NA	180351816	180324693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.53	chr2	-	2707	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-62	1968	-62	-1953	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAGTGTTTTGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	180351854	180324818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.54	chr2	-	2715	7	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-57	1899	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	68.3091420593824	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTGAGTTTGGAGCCAT	NA	False	NA	2	True	AGTAAA	-21	NA	180351849	180324917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.55	chr2	-	2598	6	NNC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	865	1897	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	72.6570024154589	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGAGTTTGGAGCC	NA	False	NA	0	True	AGTAAA	-19	NA	180350927	180324919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180350783
ES.21068.56	chr2	-	2600	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-60	2073	-60	1893	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGATCACTGAGTTTGG	NA	False	NA	-4	True	AGTAAA	-15	NA	180351852	180324923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.57	chr2	-	2549	5	ISM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	-37	3036	-37	930	5prime_fragment	FALSE	canonical	3	159	junction_4	14.0267601391055	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGTTGTTGAAGCAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	180351829	180325886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.58	chr2	-	4849	4	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	-38	930	intron_retention	FALSE	canonical	3	159	junction_3	16.1107279647928	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGTTGTTGAAGCAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	180351830	180325886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180329591_180330616_180331449_180333656_180333842_180351702
ES.21068.59	chr2	-	3593	5	NIC	ENSMUSG00000038914.16	novel	1636	6	NA	NA	-32	-432	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	71.8448849953843	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTAGAGCCATCCATA	NA	False	NA	NA	False	TATAAA	-3	NA	180351824	180327248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180329591_180330616_180331449_180332314_180332427_180333656_180333842_180351702
ES.21068.6	chr2	-	7378	14	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-12945	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.8981210588846	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	4252	False	NA	-19	True	AATAAA	-14	NA	180330693	180299756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315038_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616
ES.21068.60	chr2	-	2433	1	Intergenic	novelGene_17482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTGGGTTTTAGTTT	NA	False	NA	NA	False	AATGAA	-9	NA	180347424	180344991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180345000_180347400
ES.21068.7	chr2	-	8747	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	50.790637807463	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTCTCTCTTCACTC	NA	False	NA	-20	True	AATAAA	-13	NA	180351821	180299757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351406
ES.21068.8	chr2	-	8568	16	NNC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	153	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	51.8821742027067	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTCTCTCTTCACTC	NA	False	NA	-20	True	AATAAA	-13	NA	180343632	180299757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343396
ES.21069.1	chr2	-	248	1	Intergenic	novelGene_17483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAATTTTCAGTACAAC	NA	False	NA	NA	False	NA	NA	NA	180355474	180355226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180355200_180355500
ES.2107.1	chr1	+	177	1	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGGCCAGCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	182321310	182321487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_182321300_182321500
ES.21070.1	chr2	-	8130	1	Antisense	novelGene_ENSMUSG00000023393.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAGGGAAACAATCCCA	NA	False	NA	NA	False	NA	NA	NA	180369284	180361154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_180361200_180369300
ES.21070.2	chr2	-	2328	3	Antisense	novelGene_ENSMUSG00000023393.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTCTACATGTAAATC	NA	False	NA	NA	False	AATAAA	-23	NA	180368558	180362520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_180363997_180366867_180367672_180368510
ES.21071.1	chr2	-	173	1	Intergenic	novelGene_17485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTTAAA	8806	False	NA	NA	False	NA	NA	NA	180372522	180372349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180372300_180372500
ES.21072.1	chr2	+	175	1	Intergenic	novelGene_17489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAAGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	180523701	180523876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180523700_180523900
ES.21073.1	chr2	+	206	1	Intergenic	novelGene_17490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGTCATGAAGG	NA	False	NA	NA	False	NA	NA	NA	180543571	180543777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180543600_180543800
ES.21074.1	chr2	+	6776	1	Antisense	novelGene_ENSMUSG00000038848.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCCATCCCCAGCCCAC	NA	False	NA	NA	False	NA	NA	NA	180553884	180560660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_180553900_180560700
ES.21075.1	chr2	-	3003	2	Genic_Genomic	ENSMUSG00000038848.15	novel	3184	5	NA	NA	9293	160558	multi-exon	FALSE	non_canonical	0	0	junction_1	0	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATCTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	180552887	180385611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_180385768_180550040
ES.21075.10	chr2	-	3261	6	FSM	ENSMUSG00000038848.15	ENSMUST00000108876.9	2272	6	4	-993	4	0	multi-exon	FALSE	canonical	2	2	junction_3	294.883977184248	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562738	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180561698_180561780_180562104_180562130_180562476
ES.21075.12	chr2	-	2991	6	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	37	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	241.575329866276	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562705	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180553242_180553397_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.14	chr2	-	3352	5	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	266.583007710544	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562866	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562174_180562476
ES.21075.15	chr2	-	3137	5	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	262.106252310013	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562704	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552488_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.16	chr2	-	1668	4	NIC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	263.924652547317	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTGTTCTTGTTT	NA	False	NA	-4	True	NA	NA	NA	180562749	180546171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180547462_180560927_180561008_180562104_180562130_180562476
ES.21075.19	chr2	-	2593	6	NNC	ENSMUSG00000038848.15	novel	2272	6	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	228.880230688454	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTGTTCTTGTTT	NA	False	NA	-4	True	NA	NA	NA	180562726	180546171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180553254_180553826_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.2	chr2	-	157	1	Intergenic	novelGene_17486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	180470775	180470618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180470600_180470800
ES.21075.20	chr2	-	2641	6	NNC	ENSMUSG00000038848.15	novel	2272	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	241.575329866276	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTGTTCTTGTTT	NA	False	NA	-4	True	NA	NA	NA	180562747	180546171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180553236_180553781_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.21	chr2	-	2191	6	NNC	ENSMUSG00000038848.15	novel	2272	6	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	241.575329866276	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCTTGTGTGTTCTTG	NA	False	NA	-7	True	NA	NA	NA	180562738	180546174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180552767_180553750_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.22	chr2	-	2776	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	34	374	34	-374	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	180562708	180546543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.23	chr2	-	2309	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	4	871	4	122	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGCAAACAAAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	180562738	180547040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.24	chr2	-	2257	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-66	993	-66	0	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACACCTAATACA	NA	False	NA	37	True	TATAAA	-9	NA	180562808	180547162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.26	chr2	-	1598	6	NNC	ENSMUSG00000038848.15	novel	2272	6	NA	NA	-20	-40	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	228.880230688454	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTCAGATTGACCTAAT	NA	False	NA	-3	True	AATAAA	-23	NA	180562762	180547202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180553254_180553826_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.27	chr2	-	622	4	NIC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	3	-45	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	263.924652547317	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATCAGTCAGATTGAC	NA	False	NA	-8	True	AATAAA	-18	NA	180562739	180547207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180547462_180560927_180561008_180562104_180562130_180562476
ES.21075.28	chr2	-	977	3	NIC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-7	-47	intron_retention	FALSE	canonical	3	16	junction_1	288.5	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTATCAGTCAGATTG	NA	False	NA	-10	True	AATAAA	-16	NA	180562749	180547209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180547462_180560927_180561008_180562104
ES.21075.29	chr2	-	174	1	Intergenic	novelGene_17491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180549774	180549600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180549600_180549800
ES.21075.3	chr2	-	213	1	Intergenic	novelGene_17487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTATTTTTTTAATGT	NA	False	NA	NA	False	AATAAA	-6	NA	180506749	180506536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180506500_180506700
ES.21075.30	chr2	-	3382	4	ISM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	179	4641	179	2750	5prime_fragment	FALSE	canonical	3	557	junction_3	38.7240952838869	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGAGACTGTTCGGT	NA	False	NA	NA	False	NA	NA	NA	180562563	180550810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.4	chr2	-	165	1	Intergenic	novelGene_17488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAACACACAC	NA	False	NA	NA	False	NA	NA	NA	180508948	180508783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180508800_180508900
ES.21075.5	chr2	-	3273	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	-87	-2	-87	2	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTTCTTGTTTTCCC	NA	False	NA	0	True	NA	NA	NA	180562829	180546167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.6	chr2	-	3122	6	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	241.575329866276	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562768	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180553287_180553374_180554001_180560927_180561008_180562104_180562130_180562476
ES.21075.9	chr2	-	3254	4	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	294.777128616783	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562810	180546169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180547462_180552479_180554001_180560927_180561035_180562476
ES.21076.1	chr2	+	1996	6	FSM	ENSMUSG00000038840.8	ENSMUST00000137859.2	1529	6	-465	-2	-465	-1	multi-exon	FALSE	canonical	3	12	junction_1	3.81575680566778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCAGCTAGGCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	180570350	180575802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180571307_180572597_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
ES.21076.2	chr2	+	1468	6	NNC	ENSMUSG00000038840.8	novel	1529	6	NA	NA	-386	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.47261667690776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCAGCTAGGCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	180570429	180575802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180571307_180573046_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
ES.21077.1	chr2	+	169	1	Intergenic	novelGene_17492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAATGGCCAAAC	623	False	NA	NA	False	NA	NA	NA	180581854	180582023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180581900_180582000
ES.21078.1	chr2	-	3222	6	NNC	ENSMUSG00000027574.16	novel	865	6	NA	NA	1	3	intron_retention	TRUE	canonical	0	0	junction_4	55.9371075405227	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCGCATCCCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	180596491	180576561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180591262_180591497_180596363
ES.21078.2	chr2	-	975	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	-25	0	-25	0	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTCGCATCCCTGGT	NA	False	NA	NA	False	NA	NA	NA	180596517	180576564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
ES.21078.3	chr2	-	2949	5	NIC	ENSMUSG00000027574.16	novel	865	6	NA	NA	30	-2	intron_retention	FALSE	canonical	3	100	junction_4	10.9857862713599	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACAATTCGCATCCCTG	NA	False	NA	NA	False	NA	NA	NA	180596457	180576566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
ES.21078.4	chr2	-	1911	5	NNC	ENSMUSG00000027574.16	novel	450	4	NA	NA	26	2192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.3463007578511	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTCAAGTGTACATGCA	NA	False	NA	NA	False	NA	NA	NA	180596461	180582764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180584161_180584822_180585021_180585533_180585615_180585869_180586008_180596363
ES.21078.5	chr2	-	4207	1	NIC	ENSMUSG00000027574.16	novel	950	7	NA	NA	-2142	2151	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGATGCCTAAGGAT	2359	False	NA	NA	False	NA	NA	NA	180587012	180582805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180582800_180587000
ES.21078.6	chr2	-	2443	6	NNC	ENSMUSG00000027574.16	novel	450	4	NA	NA	-116	2137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.8095230383651	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAACATGAA	NA	False	NA	NA	False	NA	NA	NA	180596608	180582819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180584367_180584822_180585021_180585533_180585615_180585869_180586008_180591262_180591497_180596363
ES.21078.7	chr2	-	176	1	Intergenic	novelGene_17493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACCATGATC	1010	False	NA	NA	False	NA	NA	NA	180588361	180588185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180588200_180588400
ES.21079.1	chr2	+	2726	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	-12	0	-3	0	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTGCTTGCTTCAC	4022	False	NA	25	True	NA	NA	NA	180609014	180624319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.10	chr2	+	2505	13	NNC	ENSMUSG00000027575.20	novel	1885	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.2133046932699	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4045	False	NA	-43	True	NA	NA	NA	180609037	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609464_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ES.21079.11	chr2	+	4961	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	-10	intron_retention	FALSE	canonical	3	201	junction_1	25.4347325489125	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGACCCATGTGTTATC	4045	False	NA	10	True	NA	NA	NA	180609037	180624094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.12	chr2	+	3868	11	NIC	ENSMUSG00000027575.20	novel	2639	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	233	junction_5	17.8384416359726	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTATCAGTGGTTGGT	4047	False	NA	20	True	NA	NA	NA	180609039	180624104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180622268_180622829
ES.21079.13	chr2	+	5468	10	NIC	ENSMUSG00000027575.20	novel	1885	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	201	junction_1	26.805656303783	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTGCTAGTTCTTTC	4047	False	NA	NA	False	TTTAAA	-5	NA	180609039	180623493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180622268_180622829
ES.21079.14	chr2	+	4884	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	201	junction_1	27.0536656748449	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4047	False	NA	-43	True	NA	NA	NA	180609039	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180621514_180622190_180622268_180622829
ES.21079.15	chr2	+	2303	1	NIC	ENSMUSG00000027575.20	novel	2382	12	NA	NA	2	-3380	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGTGGAATGTACTAGG	4047	False	NA	NA	False	NA	NA	NA	180609039	180611342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609000_180611300
ES.21079.16	chr2	+	3149	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTATCAGTGGTTGG	4048	False	NA	19	True	NA	NA	NA	180609040	180624103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.17	chr2	+	7391	51	Fusion	ENSMUSG00000027575.20_ENSMUSG00000016356.19	novel	4489	37	NA	NA	4	-1	multi-exon	FALSE	canonical	0	0	junction_6	115.564880478457	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTGAGGTGTCTGA	4049	False	NA	NA	False	GATAAA	-17	NA	180609041	180659332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615255_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829_180624673_180628317_180628407_180630812_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180635992_180636152_180636669_180636790_180637252_180637418_180638147_180638301_180638474_180638645_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641610_180641825_180641969_180642157_180642291_180642685_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649359_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655011_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657403_180657482_180657651_180658047_180658126_180659111
ES.21079.18	chr2	+	5179	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	5	-2	intron_retention	FALSE	canonical	3	201	junction_1	25.4347325489125	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4050	False	NA	23	True	NA	NA	NA	180609042	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.19	chr2	+	2761	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4053	False	NA	23	True	NA	NA	NA	180609045	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.2	chr2	+	2498	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	3	213	3	2	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTATCAGTGGTTGGTGT	4037	False	NA	22	True	NA	NA	NA	180609029	180624106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.20	chr2	+	1288	11	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.9797565674906	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAGAAAAAG	4053	False	NA	NA	False	NA	NA	NA	180609045	180620083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180619806
ES.21079.21	chr2	+	3153	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	390	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCTGCCTGCCTCAGG	4053	False	NA	NA	False	GATAAA	-30	NA	180609045	180624709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.22	chr2	+	3623	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_9	78.6880267610998	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTGCTAGTTCTTTC	4053	False	NA	NA	False	TTTAAA	-5	NA	180609045	180623493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180620235_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.23	chr2	+	5871	14	Fusion	ENSMUSG00000070461.4_ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	43	multi-exon	FALSE	canonical	3	35	junction_1	65.799947842644	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTTTCCAATAATCT	4053	False	NA	NA	False	NA	NA	NA	180609045	180627427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.24	chr2	+	2730	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	75.0698294252813	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4053	False	NA	23	True	NA	NA	NA	180609045	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612806_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.25	chr2	+	1642	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	21	1051	-10	2	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGAGTTGGTGCTGCC	4055	False	NA	NA	False	NA	NA	NA	180609047	180623268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.26	chr2	+	2677	14	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	76.0121447786218	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4057	False	NA	-43	True	NA	NA	NA	180609049	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615395_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.27	chr2	+	3210	14	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_8	99.979583714693	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTATCAGTGGTTGGT	4057	False	NA	20	True	NA	NA	NA	180609049	180624104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180616250_180616320_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.28	chr2	+	4507	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	201	junction_1	26.4904332836508	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4057	False	NA	23	True	NA	NA	NA	180609049	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.29	chr2	+	5407	11	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	201	junction_1	24.9737862567933	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4058	False	NA	-41	True	NA	NA	NA	180609050	180624253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.3	chr2	+	2428	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	77.6818654656428	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTCTGTGGTTTGTGT	4037	False	NA	-45	True	NA	NA	NA	180609029	180624249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.30	chr2	+	3360	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-6	4	intron_retention	FALSE	canonical	3	35	junction_1	68.151129036054	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGTGTCTGTCA	4059	False	NA	-37	True	NA	NA	NA	180609051	180624257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.31	chr2	+	2505	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	77.7947352546002	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4065	False	NA	-43	True	NA	NA	NA	180609057	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.32	chr2	+	6720	9	NIC	ENSMUSG00000027575.20	novel	3831	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_1	28.4077454226836	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4065	False	NA	-43	True	NA	NA	NA	180609057	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615950_180618099_180618157_180619112_180622268_180622829
ES.21079.33	chr2	+	2886	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	233	junction_5	17.3082751563779	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTGTGGTTTGTGTG	4065	False	NA	-44	True	NA	NA	NA	180609057	180624250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.34	chr2	+	2822	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_1	23.9548473329262	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTGCTAGTTCTTTC	4065	False	NA	NA	False	TTTAAA	-5	NA	180609057	180623493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.35	chr2	+	2660	14	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	75.7370099393699	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4066	False	NA	-41	True	NA	NA	NA	180609058	180624253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614633_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.36	chr2	+	6324	9	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	8	intron_retention	FALSE	canonical	3	252	junction_2	13.7289611770155	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTCTGTCATGTT	4066	False	NA	-33	True	NA	NA	NA	180609058	180624261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615950_180618099_180618157_180619112_180621514_180622190_180622268_180622829
ES.21079.37	chr2	+	7680	8	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	3	intron_retention	FALSE	canonical	3	201	junction_1	30.2877357815917	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTTTGTGTGTCTGTC	4066	False	NA	-38	True	NA	NA	NA	180609058	180624256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615950_180618099_180622268_180622829
ES.21079.38	chr2	+	3149	12	NNC	ENSMUSG00000027575.20	novel	1885	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_1	100.483623927911	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTGTGTGT	4066	False	NA	-43	True	NA	NA	NA	180609058	180624251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609464_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ES.21079.39	chr2	+	3318	13	NIC	ENSMUSG00000027575.20	novel	3831	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	3	junction_2	78.0129529843175	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4066	False	NA	-41	True	NA	NA	NA	180609058	180624253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612806_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.4	chr2	+	2555	13	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	78.1462304486489	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGACCTGAAGTTCT	4040	False	NA	-56	True	NA	NA	NA	180609032	180624238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613978_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.40	chr2	+	3284	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	-3	intron_retention	FALSE	canonical	3	34	junction_10	71.5895093658259	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCCAGTGCTTGCTT	4066	False	NA	22	True	NA	NA	NA	180609058	180624316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ES.21079.41	chr2	+	4283	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	201	junction_1	26.4904332836508	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTTATCAGTGGTTG	4066	False	NA	18	True	NA	NA	NA	180609058	180624102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.42	chr2	+	3260	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	33	-579	0	579	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTGTCTGCTGCT	4067	False	NA	NA	False	AGTAAA	-21	NA	180609059	180624898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.43	chr2	+	6577	10	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	11	intron_retention	FALSE	canonical	3	201	junction_1	28.0149871706706	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTCATGTTTGC	4067	False	NA	-30	True	NA	NA	NA	180609059	180624264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615950_180618099_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.44	chr2	+	2406	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_11	68.6480557303377	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTATCAGTGGTTGGT	4067	False	NA	20	True	NA	NA	NA	180609059	180624104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ES.21079.46	chr2	+	2617	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	34	junction_11	68.6480557303377	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCCAGTGCTTGCTT	4068	False	NA	22	True	NA	NA	NA	180609060	180624316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ES.21079.48	chr2	+	3329	13	NNC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_6	78.9874726354333	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTGTGGTTTGTGTG	4069	False	NA	-44	True	NA	NA	NA	180609061	180624250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615395_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.49	chr2	+	5227	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	3	-2	intron_retention	FALSE	canonical	3	35	junction_1	70.9138693028672	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4070	False	NA	23	True	NA	NA	NA	180609062	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.5	chr2	+	3100	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	6	-392	-5	392	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCCTGCCTCAGGTC	4040	False	NA	NA	False	GATAAA	-32	NA	180609032	180624711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.50	chr2	+	2605	9	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	2	267	intron_retention	FALSE	canonical	3	201	junction_1	27.9505702088526	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTATGGTGAGGGGTGTGT	4081	False	NA	NA	False	AATAAA	-14	NA	180609073	180620102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112
ES.21079.51	chr2	+	7411	14	FSM	ENSMUSG00000027575.20_ENSMUSG00000016356.19	ENSMUST00000029092.13	2714	14	51	-4748	6	4748	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGACTGGTCTGGATC	4085	False	NA	NA	False	AATATA	-15	NA	180609077	180629067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.52	chr2	+	5888	4	NIC	ENSMUSG00000027575.20	novel	2278	12	NA	NA	-140	-1	intron_retention	FALSE	canonical	3	264	junction_1	7.03957069398096	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTCTGTGGTTTGTGTG	NA	False	NA	-44	True	NA	NA	NA	180615138	180624250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180615341_180615852_180615950_180618099_180622268_180622829
ES.21079.53	chr2	+	5353	36	Fusion	ENSMUSG00000027575.20_ENSMUSG00000016356.19	novel	4489	37	NA	NA	935	0	intron_retention	FALSE	canonical	0	0	junction_4	1.62982407965162	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGAGGTGTCTGAT	NA	False	NA	NA	False	GATAAA	-18	NA	180623076	180659333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_180624262_180628317_180628407_180630812_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180636084_180636152_180636669_180636790_180637252_180637418_180638147_180638301_180638474_180638645_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641610_180641825_180641969_180642157_180642291_180642685_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649564_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655038_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657651_180658047_180658126_180659111
ES.21079.54	chr2	+	7260	37	NNC	ENSMUSG00000016356.19	novel	4489	37	NA	NA	-2124	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.54235470132242	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATTTGTGTTTTCTTT	NA	False	NA	NA	False	AATGAA	-19	NA	180626203	180660156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180628407_180630812_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180635992_180636152_180636669_180636790_180637252_180637418_180638147_180638301_180638474_180638645_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641610_180641825_180641969_180642157_180642295_180642691_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649359_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657403_180657482_180657651_180658047_180658126_180659111
ES.21079.55	chr2	+	4181	1	FSM	ENSMUSG00000070461.4	ENSMUST00000189441.2	3352	1	746	-1575	438	1575	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCACAGGTTGTGGGAT	NA	False	NA	NA	False	AATAAA	-25	NA	180626462	180630643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180626500_180630600
ES.21079.56	chr2	+	4581	35	NNC	ENSMUSG00000016356.19	novel	4489	37	NA	NA	-251	0	intron_retention	FALSE	canonical	0	0	junction_3	1.60368304473125	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTGAGGTGTCTGAT	NA	False	NA	NA	False	GATAAA	-18	NA	180628076	180659333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180628407_180630812_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180635992_180636152_180636669_180636790_180637252_180637418_180638147_180638301_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641969_180642157_180642291_180642685_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649359_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657372_180657482_180657651_180658047_180658126_180659111
ES.21079.57	chr2	+	4352	37	NNC	ENSMUSG00000016356.19	novel	4489	37	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.55232800084976	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTGAGGTGTCTGA	NA	False	NA	NA	False	GATAAA	-17	NA	180628294	180659332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180628407_180630812_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180635992_180636152_180636669_180636790_180637251_180637418_180638147_180638301_180638474_180638645_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641610_180641825_180641969_180642157_180642291_180642685_180642835_180643006_180643141_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649359_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657403_180657482_180657651_180658047_180658126_180659111
ES.21079.58	chr2	+	4237	36	ISM	ENSMUSG00000016356.19	ENSMUST00000108856.9	4489	37	2483	175	2483	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	1.52636690162207	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTGAGGTGTCTGA	NA	False	NA	NA	False	GATAAA	-17	NA	180630810	180659332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180630924_180634226_180634371_180634645_180634802_180635035_180635162_180635992_180636152_180636669_180636790_180637252_180637418_180638147_180638301_180638474_180638645_180639058_180639189_180640146_180640293_180640377_180640502_180640910_180641048_180641479_180641610_180641825_180641969_180642157_180642291_180642685_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180648641_180648918_180649029_180649359_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657403_180657482_180657651_180658047_180658126_180659111
ES.21079.59	chr2	+	5049	22	NNC	ENSMUSG00000016356.19	novel	5012	36	NA	NA	-3094	-1	intron_retention	FALSE	canonical	0	0	junction_6	1.69432827377688	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTGAGGTGTCTGA	4047	False	NA	NA	False	GATAAA	-17	NA	180639152	180659332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180639189_180640146_180640293_180640377_180640502_180640910_180641969_180642157_180642291_180642685_180642835_180643006_180643137_180644121_180644161_180645137_180645277_180648497_180649519_180649588_180649667_180650312_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657372_180657482_180657651_180658047
ES.21079.6	chr2	+	3371	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	4040	False	NA	23	True	NA	NA	NA	180609032	180624317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.21079.60	chr2	+	4809	11	NIC	ENSMUSG00000016356.19	novel	5012	36	NA	NA	5288	3	intron_retention	FALSE	canonical	1	1	junction_9	1.28062484748657	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGAGGTGTCTGATCAC	NA	False	NA	NA	False	GATAAA	-21	NA	180647534	180659336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180650400_180651169_180651224_180654859_180654956_180655028_180655083_180655182_180655237_180655662_180655717_180656580_180656653_180657219_180657256_180657335_180657403_180657482_180657651_180658047
ES.21079.7	chr2	+	4078	11	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	34	junction_9	74.4134396463434	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACTTGAGTTGGTGCTG	4040	False	NA	NA	False	NA	NA	NA	180609032	180623266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180622190_180622268_180622829
ES.21079.8	chr2	+	2547	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	-5	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	77.461639251668	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGACCAGCAGTGCA	4040	False	NA	-70	True	NA	NA	NA	180609032	180624224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622196_180622268_180622829
ES.21079.9	chr2	+	1880	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	8	826	-3	0	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTGCTAGTTCTTTC	4042	False	NA	NA	False	TTTAAA	-5	NA	180609034	180623493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ES.2108.1	chr1	-	3359	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	-39	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0719297068332	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTTGTTTTTCTTC	NA	False	NA	0	True	AATAAA	-19	NA	182345212	182294818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.10	chr1	-	1882	11	ISM	ENSMUSG00000026509.16	ENSMUST00000068505.10	3225	21	51	14830	51	1810	5prime_fragment	FALSE	canonical	0	0	junction_1	15.7721273137139	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACTCAAAAGGCCATT	NA	False	NA	NA	False	AATAAA	-14	NA	182345038	182309654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_182310113_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.11	chr1	-	1757	10	ISM	ENSMUSG00000026509.16	ENSMUST00000068505.10	3225	21	39	16622	39	18	5prime_fragment	FALSE	canonical	3	40	junction_9	5.93379107680831	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTAAGCTAGAACAGAAT	NA	False	NA	NA	False	NA	NA	NA	182345050	182311446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.12	chr1	-	4174	2	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTAAAAAAAAAAGTGACC	NA	False	NA	NA	False	NA	NA	NA	182330405	182326182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182326673_182326721
ES.2108.2	chr1	-	5014	19	NIC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	-5	5	intron_retention	FALSE	canonical	0	0	junction_10	13.4297440292568	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATGCCTTGTTTTTCTT	NA	False	NA	-1	True	AATAAA	-18	NA	182345178	182294819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182310113_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.3	chr1	-	3065	19	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	-4152	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.1083150673713	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCACCATGCCTTGTTT	NA	False	NA	-6	True	AATAAA	-13	NA	182324278	182294824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182323966
ES.2108.4	chr1	-	3314	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.0719297068332	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCACCATGCCTTGTTT	NA	False	NA	-6	True	AATAAA	-13	NA	182345180	182294824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311757_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.6	chr1	-	4182	20	NIC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_10	13.0719297068332	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCGCACCATGCCTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	182345171	182294826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182310113_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.7	chr1	-	2353	14	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	4449	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.2894489355369	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCGCACCATGCCTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	182315677	182294826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182315483
ES.2108.8	chr1	-	3271	19	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.8516585255496	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCGCACCATGCCTTGT	NA	False	NA	-8	True	AATAAA	-11	NA	182345216	182294826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.2108.9	chr1	-	2865	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	27	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0719297068332	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATGCTTGCTTCCATCA	NA	False	NA	NA	False	TTTAAA	-5	NA	182345062	182295162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ES.21080.1	chr2	-	4554	6	FSM	ENSMUSG00000027577.15	ENSMUST00000067120.14	4565	6	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTGGCCCTGTCTT	1547	False	NA	1	True	AATAAA	-24	NA	180681087	180664103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180666673_180669990_180671366_180675712_180675823_180675901_180675947_180679211_180679364_180680784
ES.21080.2	chr2	-	4564	7	NNC	ENSMUSG00000027577.15	novel	4565	6	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.56580071972344	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCGTGTGGCCCTGTCT	1623	False	NA	0	True	AATAAA	-23	NA	180681011	180664104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180666673_180669990_180671366_180675712_180675823_180675901_180675947_180676318_180676406_180679211_180679364_180680784
ES.21081.1	chr2	-	5344	1	ISM	ENSMUSG00000016346.18	ENSMUST00000149964.9	8209	17	54290	2	14497	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGGCCTCTTCATTT	4046	False	NA	0	True	AGTAAA	-20	NA	180722717	180717373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180717400_180722700
ES.21081.10	chr2	-	1429	8	FSM	ENSMUSG00000016346.18	ENSMUST00000154164.8	1226	8	-89	-114	-5	114	multi-exon	FALSE	canonical	2	2	junction_1	4.20398256273205	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATATACAAAAAGGAACA	NA	False	NA	NA	False	CATAAA	-23	NA	180777059	180750122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180750355_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.2	chr2	-	3280	15	FSM	ENSMUSG00000016346.18	ENSMUST00000197015.5	8031	15	-160	4911	13	2	multi-exon	FALSE	canonical	1	2	junction_2	4.77877962390792	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTGTGGTTGGGTA	NA	False	NA	NA	False	AGTAAA	-17	NA	180777080	180722289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180723569_180724125_180724250_180728761_180728894_180729367_180729477_180730139_180730364_180738742_180738773_180742342_180742412_180746679_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.4	chr2	-	3153	13	NNC	ENSMUSG00000016346.18	novel	4200	16	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.69112369298796	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTTGCGTGTGGTTG	NA	False	NA	NA	False	AGTAAA	-13	NA	180777058	180722293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180723569_180724125_180724250_180728761_180728894_180729367_180729477_180730139_180730364_180742318_180742412_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.5	chr2	-	4065	13	NIC	ENSMUSG00000016346.18	novel	2713	16	NA	NA	-4	-91	intron_retention	FALSE	canonical	0	0	junction_2	5.37677619231285	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCCCAGCACCACACT	NA	False	NA	NA	False	NA	NA	NA	180777011	180726465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180728894_180729367_180729474_180730139_180730328_180738742_180738773_180742342_180742412_180746679_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.6	chr2	-	3432	7	FSM	ENSMUSG00000016346.18	ENSMUST00000123336.8	1686	7	-88	-1658	-4	1658	multi-exon	FALSE	canonical	3	10	junction_1	1.82574185835055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGTTTGGCTAGGCTT	NA	False	NA	NA	False	NA	NA	NA	180777058	180748578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.7	chr2	-	2949	7	FSM	ENSMUSG00000016346.18	ENSMUST00000123336.8	1686	7	-101	-1162	-17	1162	multi-exon	FALSE	canonical	3	10	junction_1	1.82574185835055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTGTAGTTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	180777071	180749074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.8	chr2	-	3053	9	NNC	ENSMUSG00000016346.18	novel	1686	7	NA	NA	-10	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.78791845139511	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTGTAGTTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	180777017	180749074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180749430_180750814_180750911_180751467_180753037_180753265_180753351_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21081.9	chr2	-	5161	6	NIC	ENSMUSG00000016346.18	novel	1686	7	NA	NA	-15	1162	intron_retention	FALSE	canonical	3	10	junction_1	1.35646599662505	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTGTAGTTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	180777069	180749074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180750911_180751467_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ES.21082.1	chr2	+	668	5	NNC	ENSMUSG00000016344.15	novel	771	3	NA	NA	-488	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	353.675345479438	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	2848	False	NA	3	True	AATAAA	-19	NA	180828551	180830299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180828648_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.10	chr2	+	2908	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	-11	1731	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCCTCACCCTCTCCA	3414	False	NA	NA	False	NA	NA	NA	180829117	180832295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.11	chr2	+	887	3	NIC	ENSMUSG00000016344.15	novel	750	4	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	258	junction_1	301.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTGGTATGTTTGAAA	3415	False	NA	0	True	AATAAA	-16	NA	180829118	180830296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180829248_180829457_180829894_180829974
ES.21082.12	chr2	+	2787	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	79	-1706	-10	1706	multi-exon	FALSE	canonical	3	201	junction_1	270.955139275859	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTCTCGAGCCCTTTA	3415	False	NA	NA	False	NA	NA	NA	180829118	180832270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.13	chr2	+	2662	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	0	-1973	0	1706	multi-exon	FALSE	canonical	3	258	junction_1	248.035279748668	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTCTCGAGCCCTTTA	3425	False	NA	NA	False	NA	NA	NA	180829128	180832270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.14	chr2	+	601	3	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	19	-1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	409.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTGGTATGTTTGAAA	3644	False	NA	0	True	AATAAA	-16	NA	180829347	180830296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180829530_180829796_180829894_180829974
ES.21082.15	chr2	+	2494	3	FSM	ENSMUSG00000016344.15	ENSMUST00000138800.8	771	3	241	-1964	-137	1697	multi-exon	FALSE	canonical	3	861	junction_2	3.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTAGCTCTCG	3866	False	NA	NA	False	NA	NA	NA	180829569	180832261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829680_180829796_180829894_180829974
ES.21082.2	chr2	+	729	5	NNC	ENSMUSG00000016344.15	novel	771	3	NA	NA	-138	16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	352.425435376052	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTACTGAATCCAGCC	3198	False	NA	17	True	AATAAA	-33	NA	180828901	180830313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180828930_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.3	chr2	+	901	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	-149	-2	-49	2	multi-exon	TRUE	canonical	3	258	junction_1	285.921123544395	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3287	False	NA	3	True	AATAAA	-19	NA	180828990	180830299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
ES.21082.4	chr2	+	950	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	-49	259	-49	8	multi-exon	FALSE	canonical	3	201	junction_1	270.955139275859	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTGAAACATTACTGA	3287	False	NA	9	True	AATAAA	-25	NA	180828990	180830305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.5	chr2	+	649	5	NNC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	353.258669391142	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCCCCTGGTATGTTT	3297	False	NA	-4	True	AATAAA	-12	NA	180829000	180830292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180829085_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.6	chr2	+	799	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-104	-6	-15	6	multi-exon	FALSE	canonical	3	258	junction_1	248.035279748668	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGTTTGAAACATTACT	3321	False	NA	7	True	AATAAA	-23	NA	180829024	180830303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ES.21082.7	chr2	+	924	4	FSM	ENSMUSG00000016344.15	ENSMUST00000127971.8	1153	4	-6	235	-6	2	multi-exon	FALSE	canonical	3	201	junction_1	312.789954371229	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3379	False	NA	3	True	AATAAA	-19	NA	180829082	180830299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180829248_180829342_180829680_180829796_180829894_180829974
ES.21082.8	chr2	+	2915	5	NNC	ENSMUSG00000016344.15	novel	750	4	NA	NA	1	3093	intron_retention	FALSE	non_canonical	0	0	junction_4	378.901949717866	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCGTTATTTATTTATT	3386	False	NA	NA	False	NA	NA	NA	180829089	180833657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974_180832090_180833334
ES.21082.9	chr2	+	940	4	NIC	ENSMUSG00000016344.15	novel	1160	5	NA	NA	1	2	intron_retention	FALSE	canonical	3	629	junction_1	111.05254011803	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTATGTTTGAAACAT	3386	False	NA	3	True	AATAAA	-19	NA	180829089	180830299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180829530_180829601_180829680_180829796_180829894_180829974
ES.21083.1	chr2	-	214	1	Intergenic	novelGene_17494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATAATGTAAAACTAGT	NA	False	NA	NA	False	NA	NA	NA	180833354	180833140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180833100_180833400
ES.21084.1	chr2	-	232	1	Intergenic	novelGene_17495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATAAATGCTTAGGCCA	NA	False	NA	NA	False	NA	NA	NA	180833873	180833641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180833600_180833900
ES.21085.1	chr2	-	3343	8	FSM	ENSMUSG00000038751.6	ENSMUST00000016511.6	3689	8	174	172	174	-172	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTGGCTGTTTGTAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	180844408	180835685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180837750_180838093_180838248_180838737_180838920_180840172_180840335_180840869_180841024_180841391_180841556_180841923_180842046_180844067
ES.21086.1	chr2	-	2568	8	FSM	ENSMUSG00000027579.7	ENSMUST00000016498.5	2562	8	-7	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_4	0.880630571852711	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTTCCCAGAATGCA	NA	False	NA	NA	False	AATAAA	-20	NA	180854985	180847355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180848174_180848427_180848585_180848665_180848848_180849411_180849571_180849656_180849799_180850467_180850635_180851241_180851364_180854164
ES.21087.1	chr2	+	133	1	Intergenic	novelGene_17496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	180859849	180859982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180859800_180860000
ES.21088.1	chr2	-	1611	4	ISM	ENSMUSG00000027580.18	ENSMUST00000121484.2	10063	18	12377	-4	6168	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTGTTTTGTGGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	180871379	180869407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180870663_180870747_180870916_180871016_180871174_180871348
ES.21089.1	chr2	-	2932	6	NNC	ENSMUSG00000027580.18	novel	2800	6	NA	NA	-2098	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.489897948556636	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAAGTTCCTCTTTG	7497	False	NA	NA	False	AATATA	-15	NA	180885918	180878949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180879791_180879888_180880407_180881099_180881205_180881277_180881462_180881772_180882865_180885726
ES.2109.1	chr1	-	177	1	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTCTATTTAC	NA	False	NA	NA	False	NA	NA	NA	182487388	182487211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182487200_182487400
ES.21090.1	chr2	+	209	1	Intergenic	novelGene_17497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTAACAGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	180908280	180908489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180908300_180908500
ES.21091.1	chr2	+	2145	1	Intergenic	novelGene_17499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAATAAATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180916391	180918536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180916400_180918500
ES.21092.1	chr2	+	233	1	Intergenic	novelGene_17500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAATAAGAATTTTGG	NA	False	NA	NA	False	AAAAAG	-31	NA	180926401	180926634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180926400_180926600
ES.21093.1	chr2	+	1543	2	Genic_Genomic	ENSMUSG00000084033.4	novel	788	1	NA	NA	-4373	1044	multi-exon	FALSE	canonical	3	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTGCAATTTATAGCA	544	False	NA	NA	False	NA	NA	NA	180929567	180935772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_180929904_180934565
ES.21093.2	chr2	+	887	1	Antisense	novelGene_ENSMUSG00000038705.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAAG	556	False	NA	NA	False	NA	NA	NA	180929579	180930466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_180929600_180930500
ES.21093.3	chr2	+	2612	1	Antisense	novelGene_ENSMUSG00000038705.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGTTTTAGGTCACGT	560	False	NA	NA	False	NA	NA	NA	180929583	180932195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_+_180929600_180932200
ES.21093.4	chr2	+	3918	2	Genic_Genomic	ENSMUSG00000084033.4	novel	788	1	NA	NA	-4288	2680	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAAGACTGGGCATGG	629	False	NA	NA	False	NA	NA	NA	180929652	180937408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_180929904_180933741
ES.21094.1	chr2	-	4213	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	-91	-1	-91	1	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTGTCTCTTGTAAT	6085	False	NA	-3	True	AATAAA	-17	NA	180929919	180893240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
ES.21094.10	chr2	-	3073	1	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	1605	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCGTGTGTTTGTCTCT	NA	False	NA	-9	True	AATAAA	-11	NA	180896319	180893246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180893200_180896300
ES.21094.11	chr2	-	3863	8	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	26.8844845627377	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTCGTGTGTTTGTCTC	6202	False	NA	-10	True	AATAAA	-10	NA	180929802	180893247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180919741_180919915_180929676
ES.21094.12	chr2	-	3467	10	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	-7	-645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.1827885569921	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGAGTCTTTCCTTGG	6188	False	NA	NA	False	AATAAA	-17	NA	180929816	180893886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906905_180907607_180907706_180919741_180919915_180929676
ES.21094.13	chr2	-	4663	1	Intergenic	novelGene_17498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAGCAAAAAACCCAAA	4115	False	NA	NA	False	NA	NA	NA	180916903	180912240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180912200_180916900
ES.21094.14	chr2	-	2700	1	Genic_Genomic	ENSMUSG00000038705.14	novel	NA	NA	NA	NA	271	-19454	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTATTACCCGGGCAGT	6466	False	NA	NA	False	NA	NA	NA	180929538	180926838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_180926800_180929500
ES.21094.2	chr2	-	4372	11	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	357	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.2386822843506	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTGTCTCTTGTAA	6552	False	NA	-4	True	AATAAA	-16	NA	180929452	180893241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180909905_180910057_180919741_180919915_180929200
ES.21094.3	chr2	-	4775	9	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	33	0	intron_retention	FALSE	canonical	3	53	junction_5	10.7347275233235	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTGTCTCTTGTAA	6228	False	NA	-4	True	AATAAA	-16	NA	180929776	180893241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180907706_180919741_180919915_180929676
ES.21094.5	chr2	-	4726	10	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	391	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	24.1297930695696	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTTTGTCTCTTGT	6586	False	NA	-6	True	AATAAA	-14	NA	180929418	180893243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180928659
ES.21094.6	chr2	-	4217	11	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.6042226717744	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTGTGTTTGTCTCTT	6181	False	NA	-8	True	AATAAA	-12	NA	180929823	180893245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180928781_180928887_180929676
ES.21094.7	chr2	-	4103	10	NIC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	31.0189109980698	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTGTGTTTGTCTCTT	6196	False	NA	-8	True	AATAAA	-12	NA	180929808	180893245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906762_180906897_180907607_180907706_180919741_180919915_180929676
ES.21094.8	chr2	-	4249	11	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.9077660143854	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCGTGTGTTTGTCTCT	6198	False	NA	-9	True	AATAAA	-11	NA	180929806	180893246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180901261_180901417_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
ES.21094.9	chr2	-	4173	11	NNC	ENSMUSG00000038705.14	novel	4121	10	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	28.6593789186018	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCGTGTGTTTGTCTCT	6216	False	NA	-9	True	AATAAA	-11	NA	180929788	180893246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180928789_180928887_180929676
ES.21095.1	chr2	+	2216	1	Intergenic	novelGene_17501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTTATTAGTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	180941104	180943320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180941100_180943300
ES.21096.1	chr2	+	6042	32	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-6136	-2	intron_retention	FALSE	canonical	0	0	junction_1	95.3213525383471	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180955395	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180955940_180959173_180959381_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977667_180977840_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.10	chr2	+	4146	35	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_33	59.5404619481285	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961497	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.100	chr2	+	3863	31	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	70.3576972019093	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961545	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.101	chr2	+	4198	31	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	81.6331155570799	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961545	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180972602_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997690
ES.21096.102	chr2	+	4309	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_31	57.8412470611734	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961545	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.103	chr2	+	4296	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_2	62.7572319028375	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961546	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962758_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.104	chr2	+	6589	29	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	231	junction_6	27.1542269419758	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961547	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443
ES.21096.106	chr2	+	4186	33	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_28	69.0044156195819	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961552	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995868_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.107	chr2	+	8314	21	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	-2	0	intron_retention	FALSE	canonical	3	231	junction_6	29.4119023526191	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961552	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991997_180992427_180992967_180993044_180993161_180993368_180993747_180993833_180994642_180995769_180997606_180997716
ES.21096.108	chr2	+	5456	34	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_27	69.5872126564159	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATGGTGTCTGTATTG	NA	False	NA	9	True	AATAAA	-10	NA	180961552	180998403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994460_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.11	chr2	+	4276	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_31	64.100711575534	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961502	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.110	chr2	+	5635	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_27	70.4505311814609	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961552	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994460_180994545_180994642_180995769_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.111	chr2	+	5463	30	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_11	56.6603456407846	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961552	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.112	chr2	+	4377	32	ISM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	-25	2	-2	0	intron_retention	FALSE	canonical	3	92	junction_30	41.6573905734151	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961552	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443
ES.21096.113	chr2	+	4436	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-2	0	intron_retention	FALSE	canonical	2	8	junction_20	85.7256927562021	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961552	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.114	chr2	+	4400	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	63.007673676694	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961552	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964087_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.115	chr2	+	6059	29	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-2	0	intron_retention	FALSE	canonical	3	25	junction_10	67.8936743769857	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961552	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180997346_180997443
ES.21096.116	chr2	+	4580	33	NNC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_10	82.2134227179479	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961552	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980032_180980148_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997209_180997346_180997443_180997606_180997716
ES.21096.117	chr2	+	4809	26	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_22	78.9040328500388	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961553	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180994545_180994642_180995769_180997346_180997443_180997606_180998150
ES.21096.118	chr2	+	4148	31	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_30	55.3074336976705	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961555	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997443
ES.21096.119	chr2	+	4500	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	3	0	intron_retention	FALSE	canonical	3	25	junction_10	69.6674316884316	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961557	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.12	chr2	+	4778	32	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-29	0	intron_retention	FALSE	canonical	1	2	junction_28	85.2566670213661	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961502	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180997209_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.120	chr2	+	3650	33	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.2011358064647	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961558	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982382_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.121	chr2	+	4497	35	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_28	79.5574100124512	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961558	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994357_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.122	chr2	+	5292	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_30	79.1072995604704	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATGGTGTCTGTATTGT	NA	False	NA	10	True	AATAAA	-11	NA	180961558	180998404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995999_180996145_180997346_180997443_180997606_180997716
ES.21096.123	chr2	+	4420	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_30	72.7302777156968	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961558	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996785_180996919_180997120_180997346_180997443_180997606_180997690
ES.21096.124	chr2	+	4241	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	4	0	intron_retention	FALSE	canonical	2	6	junction_11	62.4366866813895	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961558	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.125	chr2	+	4293	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	4	0	intron_retention	FALSE	canonical	1	2	junction_31	77.9284949257701	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961558	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997209_180997346_180997443_180997606_180997716
ES.21096.126	chr2	+	4808	34	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	5	-2	intron_retention	FALSE	canonical	3	25	junction_10	70.6259823631265	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961559	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.127	chr2	+	5731	28	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	5	-1	intron_retention	FALSE	canonical	3	231	junction_6	27.2326258779521	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961559	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.128	chr2	+	4313	34	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_14	76.3256038046425	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961560	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180987956_180988011_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.129	chr2	+	4111	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_34	71.4118131601735	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961561	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998138
ES.21096.13	chr2	+	4220	33	NNC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-28	-3	intron_retention	FALSE	canonical	0	0	junction_9	72.1273829762317	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATGGTGTCTGTATTGT	NA	False	NA	10	True	AATAAA	-11	NA	180961503	180998404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977688_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997209_180997346_180997443_180997606_180997716
ES.21096.130	chr2	+	4504	33	ISM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	7	1	7	0	intron_retention	FALSE	canonical	3	57	junction_31	49.8754699225982	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961561	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443
ES.21096.131	chr2	+	4892	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_1	56.871600020475	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961561	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.132	chr2	+	4173	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	11	0	intron_retention	FALSE	canonical	3	28	junction_30	59.1084045584031	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961565	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.133	chr2	+	4321	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	11	-2	intron_retention	FALSE	canonical	3	12	junction_32	81.4033845758772	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961565	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997209_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.134	chr2	+	4233	36	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_35	71.4220339865472	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961566	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998128
ES.21096.135	chr2	+	5725	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-8	0	intron_retention	FALSE	canonical	3	25	junction_10	66.8326683258686	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961569	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.137	chr2	+	4396	34	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_17	87.2102785830993	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961571	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990955_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.138	chr2	+	5257	31	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-5	0	intron_retention	FALSE	canonical	2	6	junction_11	67.5527859446884	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961572	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.139	chr2	+	4398	34	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	67.8139165122269	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961573	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964087_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.14	chr2	+	5269	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-28	0	intron_retention	FALSE	canonical	3	231	junction_6	27.4514520967876	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961503	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.140	chr2	+	3940	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-3	5069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	62.1319576811262	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGGACAACTTGCTG	NA	False	NA	NA	False	AGTAAA	-13	NA	180961574	181003478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_181003208
ES.21096.142	chr2	+	4484	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	1	-1	intron_retention	FALSE	canonical	3	25	junction_10	79.066963866627	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961578	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.143	chr2	+	5005	32	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_28	85.079677413851	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961589	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180996145_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.144	chr2	+	4497	34	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	13	-1	intron_retention	FALSE	canonical	3	86	junction_32	60.8624576495876	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961590	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.145	chr2	+	4745	34	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-9	0	intron_retention	TRUE	canonical	1	1	junction_1	83.0420363308836	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961746	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996840_180996919_180997102_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.146	chr2	+	4278	33	NIC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-9	0	intron_retention	FALSE	canonical	2	4	junction_1	68.8041193239002	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961746	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961837_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.147	chr2	+	4259	37	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.2250222047892	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961747	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961837_180962162_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.148	chr2	+	4076	35	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	89.0653894541304	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961747	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961837_180962598_180962830_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.149	chr2	+	4390	34	NIC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	4	junction_1	67.3368381380622	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961749	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961837_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.15	chr2	+	4318	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	-74	-1	-28	1	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTATTGTGGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	180961503	180998410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.150	chr2	+	5150	32	NIC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-6	7	intron_retention	FALSE	canonical	2	4	junction_1	55.3261260972445	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTGGTCTTAAACTG	NA	False	NA	22	True	AATAAA	-23	NA	180961749	180998416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961837_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.151	chr2	+	4343	34	NIC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	25	0	intron_retention	FALSE	canonical	2	4	junction_1	62.4692247463024	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961780	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961837_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.152	chr2	+	4224	33	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_22	91.8086867400765	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961786	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961837_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977667_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.153	chr2	+	4354	34	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	325	-2	intron_retention	FALSE	canonical	0	0	junction_1	67.7992905689499	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180962080	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962133_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.154	chr2	+	4320	33	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	332	-2	intron_retention	FALSE	canonical	1	1	junction_1	69.156948991045	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180962087	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.155	chr2	+	4435	34	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	336	0	intron_retention	FALSE	canonical	1	1	junction_1	67.6833224626096	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180962091	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.156	chr2	+	5167	32	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	355	0	intron_retention	FALSE	canonical	1	1	junction_1	55.7914766408349	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180962110	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.157	chr2	+	4279	33	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	358	0	intron_retention	FALSE	canonical	1	1	junction_1	63.0113767009577	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180962113	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.158	chr2	+	4061	36	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	442	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	79.9060673030323	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180962197	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997799_180997950_180998052_180998150
ES.21096.159	chr2	+	4078	33	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	442	0	intron_retention	FALSE	canonical	0	0	junction_1	78.1524389314722	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180962197	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977667_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.16	chr2	+	4246	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-28	0	intron_retention	FALSE	canonical	3	21	junction_33	65.8880844267117	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961503	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180998052_180998138
ES.21096.160	chr2	+	4144	36	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	444	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	78.2102556039338	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180962199	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180962223_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998138
ES.21096.161	chr2	+	4139	33	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	901	0	intron_retention	FALSE	canonical	3	12	junction_30	56.7516175430269	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180962656	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997209_180997346_180997443_180997606_180997716
ES.21096.162	chr2	+	4768	30	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2408	-1	intron_retention	FALSE	canonical	3	18	junction_29	54.1285298228649	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180964163	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997690
ES.21096.163	chr2	+	3871	31	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	2418	0	intron_retention	FALSE	canonical	2	7	junction_1	64.5246636738404	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180964173	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180964304_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.164	chr2	+	3887	31	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2420	0	intron_retention	FALSE	canonical	2	7	junction_1	69.6340354201082	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180964175	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180964304_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.165	chr2	+	3931	32	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	2471	-2	intron_retention	FALSE	canonical	3	25	junction_8	77.7893577756145	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180964226	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.166	chr2	+	3811	31	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2492	0	intron_retention	FALSE	canonical	0	0	junction_11	79.9490184777497	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180964247	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982391_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.167	chr2	+	3777	31	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2901	0	intron_retention	FALSE	canonical	0	0	junction_8	77.9280009581494	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180964656	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980978_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997690
ES.21096.168	chr2	+	3806	28	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	3644	0	intron_retention	FALSE	canonical	3	117	junction_25	46.6888248393917	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180965399	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.169	chr2	+	4840	26	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	3718	0	intron_retention	FALSE	canonical	3	25	junction_5	71.2449970173345	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180965473	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180997346_180997443
ES.21096.17	chr2	+	4156	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_30	65.5566595056241	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961503	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.171	chr2	+	3383	28	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2207	-1	intron_retention	FALSE	canonical	0	0	junction_23	94.9403249147829	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	4986	False	NA	12	True	AATAAA	-13	NA	180972616	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996156_180996236_180997120_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.172	chr2	+	3651	25	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-37	-2	intron_retention	FALSE	canonical	1	1	junction_1	89.2832182190783	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	3368	False	NA	11	True	AATAAA	-12	NA	180977691	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180977840_180980032_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.173	chr2	+	3322	28	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	103.791219686208	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	3368	False	NA	12	True	AATAAA	-13	NA	180977691	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994357_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998135
ES.21096.174	chr2	+	3089	27	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_21	80.2342815810574	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	3426	False	NA	11	True	AATAAA	-12	NA	180977749	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996840_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.175	chr2	+	367	1	Intergenic	novelGene_17503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAGAATTATGTATAT	6124	False	NA	NA	False	NA	NA	NA	180980447	180980814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_180980400_180980800
ES.21096.177	chr2	+	3276	23	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-28	0	intron_retention	FALSE	canonical	3	57	junction_20	59.539364712879	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	6552	False	NA	13	True	AATAAA	-14	NA	180980875	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.178	chr2	+	3998	21	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	82	0	intron_retention	FALSE	canonical	1	1	junction_2	87.0135621613091	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	6662	False	NA	14	True	AATAAA	-15	NA	180980985	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180981035_180982288_180982387_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.179	chr2	+	4006	20	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	101	-2	intron_retention	FALSE	canonical	3	239	junction_9	26.5132591091185	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	6681	False	NA	11	True	AATAAA	-12	NA	180981004	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443
ES.21096.18	chr2	+	4341	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-28	0	intron_retention	FALSE	canonical	3	18	junction_32	60.0463362745805	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961503	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997690
ES.21096.180	chr2	+	4984	17	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	1126	-1	intron_retention	FALSE	canonical	3	88	junction_16	54.5032969186269	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	7706	False	NA	12	True	AATAAA	-13	NA	180982029	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994642_180995769_180998052_180998150
ES.21096.181	chr2	+	4326	17	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	1435	0	intron_retention	FALSE	canonical	3	245	junction_11	27.229278245117	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	8015	False	NA	15	True	AATAAA	-16	NA	180982338	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180997346_180997443_180997606_180997716
ES.21096.182	chr2	+	4244	16	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-2408	-1	intron_retention	FALSE	canonical	0	0	junction_11	76.319037962723	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	3788	False	NA	12	True	AATAAA	-13	NA	180988839	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180988888_180990967_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994460_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.183	chr2	+	4152	10	NIC	ENSMUSG00000038685.19	novel	4135	33	NA	NA	-353	0	intron_retention	FALSE	canonical	3	157	junction_8	46.3108125390247	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	5843	False	NA	15	True	AATAAA	-16	NA	180990894	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991370_180991461_180991997_180992427_180992967_180993044_180993161_180993368_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180997606_180997716
ES.21096.184	chr2	+	2325	19	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	90.6645050123575	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	6269	False	NA	14	True	AATAAA	-15	NA	180991320	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997209_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.185	chr2	+	3793	8	NIC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	174	0	intron_retention	FALSE	canonical	0	0	junction_7	104.666038387993	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	6370	False	NA	14	True	AATAAA	-15	NA	180991421	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180996145
ES.21096.186	chr2	+	4782	10	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	243	0	intron_retention	FALSE	canonical	3	239	junction_1	30.9292302515051	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	6439	False	NA	13	True	AATAAA	-14	NA	180991490	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991774_180991918_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.187	chr2	+	4936	4	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	-106	0	intron_retention	FALSE	canonical	3	278	junction_2	9.67241208569794	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	6653	False	NA	13	True	AATAAA	-14	NA	180991704	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991997_180992427_180993161_180993368_180994642_180995769
ES.21096.188	chr2	+	4029	9	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	5	0	intron_retention	FALSE	canonical	3	276	junction_2	18.529958850467	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	6874	False	NA	15	True	AATAAA	-16	NA	180991925	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180994642_180995769_180997346_180997443_180997606_180997716
ES.21096.189	chr2	+	4368	7	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	10	0	intron_retention	FALSE	canonical	3	278	junction_3	16.8663043439345	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	6879	False	NA	13	True	AATAAA	-14	NA	180991930	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180991997_180992427_180992967_180993044_180993161_180993368_180993747_180993833_180994642_180995769_180995969_180996145
ES.21096.19	chr2	+	4225	36	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	80.8012729744137	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961506	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997774_180997873_180997950_180998052_180998138
ES.21096.190	chr2	+	5101	2	NIC	ENSMUSG00000038685.19	novel	1594	4	NA	NA	259	0	intron_retention	FALSE	canonical	3	299	junction_1	0	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	7128	False	NA	14	True	AATAAA	-15	NA	180992179	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180994642_180995769
ES.21096.191	chr2	+	4094	6	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	703	-1	intron_retention	FALSE	canonical	3	278	junction_2	14.1336477952438	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	7572	False	NA	12	True	AATAAA	-13	NA	180992623	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180992967_180993044_180993161_180993368_180994642_180995769_180995969_180996145_180997346_180997443
ES.21096.192	chr2	+	5296	4	ISM	ENSMUSG00000038685.19	ENSMUST00000139608.8	4448	33	31184	-36	818	0	intron_retention	FALSE	canonical	3	278	junction_2	21.9241115365405	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	7687	False	NA	13	True	AATAAA	-14	NA	180992738	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180992967_180993044_180993161_180993368_180993747_180993833
ES.21096.193	chr2	+	2044	12	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	897	0	intron_retention	FALSE	canonical	3	88	junction_11	82.7073902181311	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	7766	False	NA	13	True	AATAAA	-14	NA	180992817	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.194	chr2	+	1999	10	ISM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	31463	1	-834	0	3prime_fragment	FALSE	canonical	3	92	junction_7	68.529168341519	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	7989	False	NA	14	True	AATAAA	-15	NA	180993040	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.195	chr2	+	5341	1	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-810	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	8013	False	NA	11	True	AATAAA	-12	NA	180993064	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180993100_180998400
ES.21096.196	chr2	+	1504	6	ISM	ENSMUSG00000038685.19	ENSMUST00000148252.2	3505	28	25359	1	-424	0	3prime_fragment	FALSE	canonical	3	57	junction_3	104.303403587802	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180995768	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.197	chr2	+	1370	7	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	-395	0	intron_retention	FALSE	canonical	3	21	junction_6	113.080723379363	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180995797	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180998052_180998138
ES.21096.198	chr2	+	1117	4	NNC	ENSMUSG00000038685.19	novel	712	3	NA	NA	14	0	intron_retention	FALSE	canonical	3	18	junction_2	127.230324826888	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180997009	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180997346_180997443_180997606_180997690_180998052_180998150
ES.21096.2	chr2	+	6001	31	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-5745	0	intron_retention	FALSE	canonical	0	0	junction_1	104.694391232556	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180955786	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180955940_180959173_180959381_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976768_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.20	chr2	+	4669	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-24	0	intron_retention	FALSE	canonical	3	25	junction_10	74.8934719423368	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961507	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.21	chr2	+	3980	34	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-24	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_32	68.2548834097207	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961507	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997950_180998052_180998150
ES.21096.22	chr2	+	4316	35	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_28	80.5512205677114	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961507	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994357_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.24	chr2	+	4241	34	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-20	10	intron_retention	FALSE	canonical	3	86	junction_33	52.1503442194187	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTCTTAAACTGTGT	NA	False	NA	25	True	AATAAA	-26	NA	180961511	180998419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.25	chr2	+	6941	27	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	231	junction_6	27.3939320798037	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961511	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997606_180997716
ES.21096.26	chr2	+	4305	33	NNC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-20	0	intron_retention	FALSE	canonical	2	6	junction_11	68.626451487382	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961511	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.27	chr2	+	7484	27	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-19	0	intron_retention	FALSE	non_canonical	0	0	junction_22	60.7733323834894	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961512	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994459_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.28	chr2	+	5093	33	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-19	0	intron_retention	FALSE	canonical	3	88	junction_32	42.483717009432	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961512	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.29	chr2	+	4356	33	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-19	0	intron_retention	FALSE	canonical	2	8	junction_19	67.712101657957	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961512	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.3	chr2	+	4637	35	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-5310	0	intron_retention	FALSE	canonical	0	0	junction_1	79.8276690590728	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180956221	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180956346_180959173_180959381_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.30	chr2	+	4725	34	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-19	0	intron_retention	TRUE	canonical	1	1	junction_10	72.9775743256353	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961512	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980032_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.31	chr2	+	4259	36	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_35	65.5838705905092	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961512	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998138
ES.21096.34	chr2	+	4522	35	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_28	75.7893011320857	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961516	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994357_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.35	chr2	+	4464	31	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_14	58.7928189114585	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961516	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180997346_180997443_180997606_180997716
ES.21096.36	chr2	+	5252	28	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	-15	0	intron_retention	FALSE	canonical	3	117	junction_25	46.5798428059811	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961516	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.37	chr2	+	4553	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-15	0	intron_retention	FALSE	canonical	3	18	junction_32	81.694308008193	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961516	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997690
ES.21096.38	chr2	+	4559	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-15	0	intron_retention	FALSE	canonical	3	25	junction_10	73.8010570436579	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961516	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.39	chr2	+	5328	32	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_27	71.3303784710272	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961516	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996156_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.4	chr2	+	7300	30	NNC	ENSMUSG00000038685.19	novel	3505	28	NA	NA	-4777	-1	intron_retention	TRUE	canonical	1	1	junction_1	84.475228376576	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180956754	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180959381_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180997102_180997346_180997443_180997606_180997716_180998052_180998138
ES.21096.40	chr2	+	5083	31	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-15	0	intron_retention	FALSE	canonical	2	6	junction_11	72.8897493174147	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961516	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.41	chr2	+	4341	35	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-14	0	intron_retention	FALSE	canonical	3	86	junction_34	52.4017370086383	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961517	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.42	chr2	+	5012	30	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	25	junction_10	79.9993608773519	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961517	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.43	chr2	+	4751	32	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-14	1	intron_retention	FALSE	canonical	3	117	junction_29	43.8824226032198	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTATTGTGGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	180961517	180998410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.44	chr2	+	4358	33	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-14	0	intron_retention	FALSE	canonical	2	6	junction_11	89.3999036545202	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961517	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997690
ES.21096.46	chr2	+	4031	35	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	78.3867176800414	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961517	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997690_180997753_180997950_180998052_180998150
ES.21096.47	chr2	+	5517	30	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-14	0	intron_retention	FALSE	canonical	3	231	junction_6	27.1579254214782	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961517	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.48	chr2	+	4605	33	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-14	0	intron_retention	FALSE	canonical	3	117	junction_30	43.5150835917846	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961517	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.49	chr2	+	4353	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_19	76.7332980096483	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961518	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991636_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993749_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.5	chr2	+	4302	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_34	59.3590527456187	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961458	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.50	chr2	+	5496	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-13	1	intron_retention	FALSE	canonical	3	86	junction_29	54.7921425834844	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTATTGTGGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	180961518	180998410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.51	chr2	+	5186	32	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-13	0	intron_retention	FALSE	canonical	3	231	junction_6	27.2158290845152	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961518	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.52	chr2	+	4458	34	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-13	0	intron_retention	FALSE	canonical	1	2	junction_12	82.956824377165	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961518	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.53	chr2	+	4132	35	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_34	65.9883076567724	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961521	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998138
ES.21096.54	chr2	+	4504	33	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-10	0	intron_retention	FALSE	canonical	3	25	junction_10	76.6227569002839	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961521	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.55	chr2	+	4325	35	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-10	8	intron_retention	FALSE	canonical	3	88	junction_34	52.2030653755321	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTGGTCTTAAACTGT	NA	False	NA	23	True	AATAAA	-24	NA	180961521	180998417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.56	chr2	+	5346	31	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	6	junction_11	55.9827850523911	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961521	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.57	chr2	+	4311	37	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	85.6420693538513	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961521	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180987956_180988011_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.58	chr2	+	4416	34	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-8	0	intron_retention	FALSE	canonical	3	25	junction_10	70.2036523318739	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961523	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.59	chr2	+	5386	24	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-8	-1359	intron_retention	FALSE	canonical	3	25	junction_10	73.7685287992775	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTATCAGGTTAACAC	NA	False	NA	NA	False	AAGAAA	-35	NA	180961523	180995986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769
ES.21096.6	chr2	+	4353	33	FSM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	-46	0	-46	0	multi-exon	FALSE	canonical	3	28	junction_30	51.0130095998805	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961485	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.60	chr2	+	6237	27	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	25	junction_10	68.5679057016305	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961524	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988888_180990967_180991101_180991255_180991370_180991461_180991997_180992427_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443
ES.21096.61	chr2	+	4454	34	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-5	0	intron_retention	FALSE	canonical	3	18	junction_33	64.9013237013069	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961526	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997690
ES.21096.62	chr2	+	4148	36	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	91.1765007319007	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961527	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180987956_180988011_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997950_180998052_180998150
ES.21096.63	chr2	+	4336	33	NNC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-4	0	intron_retention	FALSE	canonical	3	18	junction_32	66.4120659217886	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961527	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997690
ES.21096.64	chr2	+	4434	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-4	0	intron_retention	FALSE	canonical	3	18	junction_33	59.8920516532843	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961527	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997690
ES.21096.65	chr2	+	5312	30	NIC	ENSMUSG00000038685.19	novel	4135	33	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	25	junction_10	69.6715071321427	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961527	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180997606_180997716
ES.21096.66	chr2	+	4233	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-4	0	intron_retention	FALSE	canonical	3	28	junction_30	59.289797380847	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961527	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.67	chr2	+	4368	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	14	junction_30	58.4443100202011	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961527	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996840_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.68	chr2	+	4349	35	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-4	0	intron_retention	FALSE	canonical	3	57	junction_31	58.0188267380112	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961527	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.69	chr2	+	5464	31	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-3	0	intron_retention	FALSE	canonical	3	117	junction_28	39.8430950381898	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961528	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.7	chr2	+	4472	34	FSM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	-68	-3	-45	3	multi-exon	FALSE	canonical	3	57	junction_31	50.0269348938753	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTATTGTGGTCTTAA	NA	False	NA	18	True	AATAAA	-19	NA	180961486	180998412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.71	chr2	+	5166	30	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_11	59.5196786970474	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961528	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988888_180990967_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180997346_180997443_180997606_180997716
ES.21096.72	chr2	+	4421	34	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	76.8000636095543	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961531	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964595_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977667_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.73	chr2	+	4835	37	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	87.8513536577905	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.74	chr2	+	5357	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_12	83.7273231892523	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961533	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980975_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.75	chr2	+	5249	32	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	88	junction_31	43.0464744133277	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961533	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.76	chr2	+	5600	29	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_17	57.8312993427734	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961533	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991266_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443
ES.21096.77	chr2	+	6778	24	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	231	junction_6	28.1269737807727	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961533	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180997606_180997716
ES.21096.78	chr2	+	4365	37	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	91.1352779602328	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961533	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994357_180994460_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998128
ES.21096.79	chr2	+	4249	35	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_2	72.7192365900675	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961533	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962758_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.8	chr2	+	4450	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	-89	-39	-43	1	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTATTGTGGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	180961488	180998410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ES.21096.80	chr2	+	5979	26	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	2	-1	intron_retention	FALSE	canonical	3	231	junction_6	28.2462316070657	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961533	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180997606_180997716
ES.21096.81	chr2	+	4461	36	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2	-1	intron_retention	FALSE	canonical	3	25	junction_10	77.9468474051912	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961533	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.82	chr2	+	4345	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	2	-2	intron_retention	FALSE	canonical	2	8	junction_20	89.0192765001682	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961533	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997209_180997346_180997443_180997606_180997716
ES.21096.83	chr2	+	5268	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	3	0	intron_retention	FALSE	canonical	3	231	junction_6	26.7278672716116	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961534	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997606_180997716
ES.21096.84	chr2	+	5392	29	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	73.0605005094673	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961535	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976706_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ES.21096.85	chr2	+	4184	34	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	4	0	intron_retention	FALSE	canonical	3	88	junction_33	51.9417629670823	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961535	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180998052_180998150
ES.21096.86	chr2	+	7699	22	NIC	ENSMUSG00000038685.19	novel	4448	33	NA	NA	5	0	intron_retention	FALSE	canonical	3	231	junction_6	28.8798433422677	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961536	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180982387_180983317_180983374_180988624_180988888_180990967_180991774_180991918_180991997_180992427_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180997346_180997443_180997606_180997716
ES.21096.87	chr2	+	5271	31	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	6	0	intron_retention	FALSE	canonical	3	231	junction_6	26.9995061683234	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961537	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.88	chr2	+	5804	27	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	2	junction_2	97.6086255767504	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGTGTCTGTATTGTG	NA	False	NA	11	True	AATAAA	-12	NA	180961539	180998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962758_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991370_180991461_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145
ES.21096.89	chr2	+	4784	32	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-6	0	intron_retention	FALSE	canonical	3	157	junction_29	34.501685250429	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961539	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180997346_180997443_180997606_180997716
ES.21096.9	chr2	+	4242	36	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	71.722594851587	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961497	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998188
ES.21096.90	chr2	+	4197	36	NNC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_30	74.1125784581422	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961539	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996840_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.91	chr2	+	4439	34	NIC	ENSMUSG00000038685.19	novel	4401	34	NA	NA	-6	0	intron_retention	FALSE	canonical	3	57	junction_30	58.8160038939198	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961539	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.92	chr2	+	4437	36	NIC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_10	74.2709106128726	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961541	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950
ES.21096.93	chr2	+	4125	36	NNC	ENSMUSG00000038685.19	novel	4322	34	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	73.0917008605894	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTCTGTATTGTGGTC	NA	False	NA	14	True	AATAAA	-15	NA	180961541	180998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962758_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.94	chr2	+	4295	33	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-4	0	intron_retention	FALSE	canonical	1	3	junction_9	62.7756343929514	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961541	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977667_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ES.21096.95	chr2	+	4602	33	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_10	76.4499172252658	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961541	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ES.21096.96	chr2	+	5467	32	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_10	65.6700198632904	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTGTATTGTGGT	NA	False	NA	13	True	AATAAA	-14	NA	180961541	180998407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180997346_180997443_180997606_180997716
ES.21096.97	chr2	+	4156	36	NNC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	83.6480186281072	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961541	180998409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180987956_180988011_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950_180998052_180998150
ES.21096.98	chr2	+	4048	32	NIC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	1	junction_30	55.2825868793308	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATGGTGTCTGTATTG	NA	False	NA	9	True	AATAAA	-10	NA	180961541	180998403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997443_180997606_180997716
ES.21096.99	chr2	+	4351	32	NIC	ENSMUSG00000038685.19	novel	4243	33	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_14	97.9685757343935	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGTCTGTATTGTGG	NA	False	NA	12	True	AATAAA	-13	NA	180961543	180998406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980027_180980148_180980848_180980888_180980955_180981035_180982288_180982387_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180996236_180997120_180997346_180997443_180997606_180997716_180997873_180997950
ES.21097.1	chr2	+	4510	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-22	5	intron_retention	FALSE	canonical	3	53	junction_7	40.6748625620843	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTGCTTTTTATC	NA	False	NA	NA	False	ATTAAA	-20	NA	181007175	181025426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.10	chr2	+	5427	3	Fusion	ENSMUSG00000027582.17_ENSMUSG00000090077.10	novel	2072	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	135	junction_2	13	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTGGCTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-11	NA	181007197	181025417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181008046_181020175_181020700_181021362
ES.21097.11	chr2	+	3685	11	FSM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-17	-2	1	2	multi-exon	FALSE	canonical	3	28	junction_6	46.2520269826091	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCTTGGTTGCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	181007198	181025423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.12	chr2	+	3701	11	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.6757715994937	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007198	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024256_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.13	chr2	+	1917	7	NNC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	65.8736163675058	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTCAGTGGAGACTC	NA	False	NA	7	True	ATTAAA	-14	NA	181007198	181022577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020696_181021362_181021483_181021566_181021973_181022167
ES.21097.14	chr2	+	4726	8	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	81	junction_6	30.513295864095	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCTCTTGGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	181007198	181025422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024497_181024591_181024954_181025050
ES.21097.15	chr2	+	2272	7	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.8389537787833	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007198	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021979_181024716_181024954_181025050
ES.21097.16	chr2	+	5328	4	NIC	ENSMUSG00000090077.10	novel	911	5	NA	NA	-14672	0	intron_retention	FALSE	canonical	3	85	junction_3	31.5383364600397	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007198	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020700_181021362_181024954_181025050
ES.21097.17	chr2	+	5041	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_5	39.8075369747991	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007198	181025421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181024338_181024408
ES.21097.18	chr2	+	2073	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	1	-2	1	2	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTCAGTGGAGACTC	NA	False	NA	7	True	ATTAAA	-14	NA	181007198	181022577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ES.21097.19	chr2	+	4912	6	FSM	ENSMUSG00000027582.17_ENSMUSG00000090077.10	ENSMUST00000108807.9	2072	6	1	-2841	1	0	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007198	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ES.21097.2	chr2	+	5205	4	ISM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-29	3	-11	-1	intron_retention	FALSE	canonical	3	135	junction_3	11.6141675934562	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007186	181025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362
ES.21097.20	chr2	+	7255	12	Fusion	ENSMUSG00000027582.17_ENSMUSG00000085028.3	novel	3666	11	NA	NA	1	8	intron_retention	FALSE	canonical	0	0	junction_9	65.2102765313049	222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTGCTTGTTTAGT	NA	False	NA	3	True	ATTAAA	-13	NA	181007198	181029387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024283_181024338_181024408_181024497_181024591_181026788_181027912_181028103_181028177_181028800_181028885
ES.21097.21	chr2	+	4949	6	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	26	junction_1	51.7741248115311	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007198	181025421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181024497_181024591
ES.21097.22	chr2	+	4750	8	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	5	5	intron_retention	FALSE	canonical	3	53	junction_6	37.594506763296	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTGCTTTTTATC	NA	False	NA	NA	False	ATTAAA	-20	NA	181007202	181025426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408_181024954_181025050
ES.21097.23	chr2	+	8362	11	Fusion	ENSMUSG00000027582.17_ENSMUSG00000085028.3	novel	3666	11	NA	NA	5	12	intron_retention	FALSE	canonical	3	18	junction_10	47.9713456138141	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCTTGTTTAGTTTTC	NA	False	NA	7	True	ATTAAA	-17	NA	181007202	181029391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050_181028800_181028885
ES.21097.24	chr2	+	4449	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	6	0	intron_retention	FALSE	canonical	1	4	junction_5	51.6256707127686	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007203	181025421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022195_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.25	chr2	+	4318	11	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	8	-3	intron_retention	FALSE	canonical	3	26	junction_1	46.5855127695295	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007205	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.26	chr2	+	3744	10	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	28	junction_6	45.2714719535328	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007208	181025421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024497_181024591_181024954_181025050
ES.21097.27	chr2	+	8538	9	Fusion	ENSMUSG00000027582.17_ENSMUSG00000085028.3	novel	3666	11	NA	NA	-7	11	intron_retention	FALSE	canonical	3	53	junction_7	41.8449519058154	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTTGTTTAGTTTT	NA	False	NA	6	True	ATTAAA	-16	NA	181007208	181029390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591
ES.21097.28	chr2	+	1959	7	NNC	ENSMUSG00000027582.17	novel	2072	6	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.8492514622075	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTCAGTGGAGACTC	NA	False	NA	7	True	ATTAAA	-14	NA	181007210	181022577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181007487_181007588_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ES.21097.29	chr2	+	3849	9	ISM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	4	5	4	-3	intron_retention	FALSE	canonical	3	28	junction_6	50.2852799037651	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007219	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408
ES.21097.3	chr2	+	4455	10	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	1	junction_7	51.1355014268252	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007187	181025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024443_181024497_181024591_181024954_181025050
ES.21097.30	chr2	+	4796	7	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	85	junction_6	25.1572830188176	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007219	181025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024954_181025050
ES.21097.31	chr2	+	3631	11	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	53.2756041730171	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007219	181025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022195_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.32	chr2	+	4833	7	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	14	-3	intron_retention	FALSE	canonical	3	53	junction_6	45.0397972168318	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007229	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181024108_181024279_181024338_181024408
ES.21097.33	chr2	+	1867	5	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.8401881551866	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTCAGTGGAGACTC	NA	False	NA	7	True	ATTAAA	-14	NA	181007248	181022577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181021362_181021483_181021566_181021973_181022167
ES.21097.34	chr2	+	4783	7	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	13	-2	intron_retention	FALSE	canonical	3	53	junction_6	36.5148371670111	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTGGCTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-11	NA	181007257	181025417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408
ES.21097.35	chr2	+	4635	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	14	5	intron_retention	FALSE	canonical	0	0	junction_2	62.5376686485833	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTGCTTTTTATC	NA	False	NA	NA	False	ATTAAA	-20	NA	181007258	181025426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181021362_181021483_181021566_181021973_181022167_181024338_181024408
ES.21097.36	chr2	+	4738	7	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	34	-2	intron_retention	FALSE	canonical	3	81	junction_6	26.5497436689865	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGGTTGGCTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-11	NA	181007278	181025417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024497_181024591
ES.21097.37	chr2	+	8008	12	Fusion	ENSMUSG00000027582.17_ENSMUSG00000085028.3	novel	3666	11	NA	NA	35	10	intron_retention	FALSE	canonical	1	1	junction_10	56.7422765705891	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTGCTTGTTTAGTTT	NA	False	NA	5	True	ATTAAA	-15	NA	181007279	181029389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050_181026788_181027073_181028103_181028177
ES.21097.38	chr2	+	4467	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	43	3	intron_retention	FALSE	canonical	3	59	junction_6	36.8103246386119	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGGTTGCTTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	181007287	181025424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024497_181024591_181024954_181025050
ES.21097.4	chr2	+	6098	2	ISM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	-27	5	-9	-3	intron_retention	FALSE	canonical	3	161	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007188	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181008046_181020175
ES.21097.40	chr2	+	3566	11	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.3691088762727	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTTGGCTCTTGGTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	181007291	181025418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181008046_181020175_181020310_181020543_181020679_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.41	chr2	+	4466	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	62	-3	intron_retention	FALSE	canonical	3	53	junction_7	41.8449519058154	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007306	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408_181024497_181024591
ES.21097.42	chr2	+	3635	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	410	-3	intron_retention	FALSE	canonical	3	53	junction_5	41.316340593039	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	7157	False	NA	NA	False	ATTAAA	-10	NA	181020596	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181020700_181021362_181021483_181021566_181021973_181022167_181024108_181024279_181024338_181024408
ES.21097.43	chr2	+	3413	6	NIC	ENSMUSG00000090077.10	novel	1959	5	NA	NA	-510	0	intron_retention	FALSE	canonical	3	59	junction_3	34.2695199849662	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	7921	False	NA	NA	False	ATTAAA	-10	NA	181021360	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181021483_181021566_181021973_181022167_181024108_181024279_181024497_181024591_181024954_181025050
ES.21097.44	chr2	+	2016	6	ISM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	14951	5	735	-3	3prime_fragment	FALSE	canonical	3	28	junction_1	20.6533290294809	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	8727	False	NA	NA	False	ATTAAA	-10	NA	181022166	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.45	chr2	+	5717	6	Fusion	ENSMUSG00000090077.10_ENSMUSG00000085028.3	novel	1959	5	NA	NA	-40	11	intron_retention	FALSE	non_canonical	0	0	junction_5	29.7428983120341	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTTGTTTAGTTTT	9548	False	NA	6	True	ATTAAA	-16	NA	181022987	181029390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181024108_181024279_181024338_181024408_181024497_181024591_181028103_181028357_181028800_181028892
ES.21097.46	chr2	+	5518	6	Fusion	ENSMUSG00000090077.10_ENSMUSG00000085028.3	novel	1959	5	NA	NA	29	8	intron_retention	FALSE	canonical	3	15	junction_5	25.0247877113873	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTGCTTGTTTAGT	9740	False	NA	3	True	ATTAAA	-13	NA	181023179	181029387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050_181028103_181028357
ES.21097.47	chr2	+	1762	4	NIC	ENSMUSG00000090077.10	novel	1959	5	NA	NA	164	0	intron_retention	FALSE	canonical	3	53	junction_2	13.8884444373331	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	9875	False	NA	NA	False	ATTAAA	-10	NA	181023314	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181024108_181024279_181024338_181024408_181024954_181025050
ES.21097.48	chr2	+	4587	7	Fusion	ENSMUSG00000090077.10_ENSMUSG00000085028.3	novel	1959	5	NA	NA	263	8	intron_retention	FALSE	canonical	1	1	junction_2	37.8725934328946	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTGCTTGTTTAGT	NA	False	NA	3	True	ATTAAA	-13	NA	181023927	181029387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181024108_181024279_181024338_181024443_181024497_181024591_181024954_181025050_181026788_181027073_181027456_181027572
ES.21097.49	chr2	+	3036	3	NIC	ENSMUSG00000085028.3	novel	1143	8	NA	NA	-31	9	intron_retention	FALSE	canonical	3	15	junction_1	1.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTGCTTGTTTAGTT	NA	False	NA	4	True	ATTAAA	-14	NA	181026011	181029388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181028103_181028357_181028800_181028885
ES.21097.5	chr2	+	4754	8	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	53	junction_6	38.2275677852451	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007190	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408_181024497_181024591
ES.21097.50	chr2	+	1584	3	NNC	ENSMUSG00000085028.3	novel	1143	8	NA	NA	1231	11	intron_retention	FALSE	canonical	1	1	junction_1	7	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTTGTTTAGTTTT	NA	False	NA	6	True	ATTAAA	-16	NA	181027434	181029390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181027456_181027572_181028103_181028357
ES.21097.51	chr2	+	3406	1	Genic_Genomic	ENSMUSG00000085028.3	novel	NA	NA	NA	NA	1733	1963	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	181027936	181031342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_+_181027900_181031300
ES.21097.6	chr2	+	3633	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	6	junction_6	49.7705673566215	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAAGGTTGGCTCTTGGT	NA	False	NA	NA	False	ATTAAA	-9	NA	181007192	181025415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181024279_181024497_181024591_181024954_181025050
ES.21097.7	chr2	+	4658	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	53	junction_6	38.0944549770698	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007194	181025421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408_181024497_181024591_181024954_181025050
ES.21097.8	chr2	+	3071	11	NNC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_7	56.1120307955433	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007197	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181007286_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181022635_181023986_181024108_181024279_181024338_181024408_181024497_181024591
ES.21097.9	chr2	+	5000	6	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	81	junction_4	34.6871734218861	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTTGGCTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	181007197	181025416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181024497_181024591_181024954_181025050
ES.21098.1	chr2	-	1278	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	-140	-2	-140	2	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTGGCTTTTCATTC	NA	False	NA	-4	True	AATAAA	-18	NA	180956433	180948249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
ES.21098.2	chr2	-	941	3	NNC	ENSMUSG00000027581.13	novel	1136	5	NA	NA	6608	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	5007	False	NA	-6	True	AATAAA	-16	NA	180949685	180948251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180948617_180949008_180949201_180949301
ES.21098.3	chr2	-	5872	4	ISM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	215	0	215	0	intron_retention	FALSE	canonical	3	148	junction_1	19.3045763140937	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	NA	False	NA	-6	True	AATAAA	-16	NA	180956078	180948251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939
ES.21098.4	chr2	-	579	2	NNC	ENSMUSG00000027581.13	novel	1136	5	NA	NA	7317	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	5716	False	NA	-6	True	AATAAA	-16	NA	180948976	180948251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_180948617_180948762
ES.21098.5	chr2	-	2624	3	NIC	ENSMUSG00000027581.13	novel	1136	5	NA	NA	215	-2	intron_retention	FALSE	canonical	3	154	junction_2	15.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAAACGTGTGGCTTTTC	NA	False	NA	-8	True	AATAAA	-14	NA	180956078	180948253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_180950690_180950939_180951036_180955986
ES.21098.6	chr2	-	174	1	Intergenic	novelGene_17502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	2642	False	NA	NA	False	NA	NA	NA	180952050	180951876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180951900_180952000
ES.21099.1	chr2	-	735	1	Intergenic	novelGene_17504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	180984295	180983560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_180983600_180984300
ES.211.1	chr1	-	5762	13	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	4	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	43.8180423265729	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGGCAGTTAACTTG	NA	False	NA	6	True	AATAAA	-26	NA	30912998	30841412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
ES.211.10	chr1	-	7195	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-340	712	0	495	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGACATTATTATTT	NA	False	NA	51	True	AGTAAA	-20	NA	30913002	30842131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.11	chr1	-	5450	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	490	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	44.488533262367	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCTCAAGACATTAT	NA	False	NA	46	True	AGTAAA	-15	NA	30912979	30842136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30876185_30876348_30902067_30902337_30912658
ES.211.12	chr1	-	6736	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	490	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCTCAAGACATTAT	NA	False	NA	46	True	AGTAAA	-15	NA	30912979	30842136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
ES.211.13	chr1	-	7005	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	490	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	37.2287468475201	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCTCAAGACATTAT	NA	False	NA	46	True	AGTAAA	-15	NA	30912979	30842136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902337_30912658
ES.211.14	chr1	-	7204	17	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	32	490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.605157977925	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCTCAAGACATTAT	NA	False	NA	46	True	AGTAAA	-15	NA	30912943	30842136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30881383_30881457_30902067_30902337_30912658
ES.211.15	chr1	-	5042	13	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-2	488	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	43.8180423265729	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	44	True	AGTAAA	-13	NA	30913004	30842138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
ES.211.16	chr1	-	6726	6	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	47029	716	-2692	488	intron_retention	FALSE	canonical	3	174	junction_2	3.9293765408777	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	7941	False	NA	44	True	AGTAAA	-13	NA	30855308	30842138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097
ES.211.17	chr1	-	5306	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	3	488	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	45.2966553097303	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	44	True	AGTAAA	-13	NA	30912999	30842138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30912658
ES.211.18	chr1	-	6911	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	8	488	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	39.454766143377	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	44	True	AGTAAA	-13	NA	30912994	30842138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30912658
ES.211.2	chr1	-	7885	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-317	-1	-4	1	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTATTTTTGGCAGTT	NA	False	NA	0	True	AATAAA	-20	NA	30912979	30841418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.20	chr1	-	7076	17	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-27002	487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	54.7830593682938	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTCTTCTCAAGACAT	9911	False	NA	43	True	AGTAAA	-12	NA	30940004	30842139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30938947_30939092_30939915
ES.211.21	chr1	-	5185	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-260	444	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	57.4648073313802	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGTGATTTGAAA	NA	False	NA	0	True	GATAAA	-17	NA	30913262	30842182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30876185_30876348_30902067_30902337_30913160
ES.211.22	chr1	-	7912	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	11	443	intron_retention	FALSE	canonical	3	122	junction_13	21.9304326804334	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30912964	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.23	chr1	-	5175	14	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-3	443	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_12	57.3679084774486	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913005	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902245_30912658
ES.211.24	chr1	-	6900	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-259	443	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	42.7327613066238	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913261	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30913160
ES.211.25	chr1	-	7598	15	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-27013	443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.276024199867	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	9900	False	NA	-1	True	GATAAA	-16	NA	30940015	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30938947
ES.211.26	chr1	-	6682	14	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	443	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	59.1046609561849	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30912979	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859168_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
ES.211.27	chr1	-	5031	15	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-26972	443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	68.3420269897025	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	9941	False	NA	-1	True	GATAAA	-16	NA	30939974	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902245_30938947_30939092_30939915
ES.211.28	chr1	-	7035	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-11	443	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30912986	30842183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
ES.211.3	chr1	-	7391	15	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-259	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.276024199867	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTACTTTTATTTTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	30913261	30841423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30913160
ES.211.30	chr1	-	4727	13	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	762	442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.2787047603116	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGTGTGTGATTTGA	6855	False	NA	-2	True	GATAAA	-15	NA	30869062	30842184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853102_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923
ES.211.31	chr1	-	4880	13	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	24	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.5617224178955	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912951	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853102_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
ES.211.32	chr1	-	3047	4	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	311	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.7361919266037	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30847875	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30844869_30844927_30845024_30845249_30845446_30847803
ES.211.33	chr1	-	4547	12	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-592	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	50.6242028811849	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30863516	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863308
ES.211.34	chr1	-	5176	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-21	441	combination_of_known_splicesites	FALSE	canonical	2	6	junction_12	56.4086946170745	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30913023	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30876185_30876348_30912658
ES.211.36	chr1	-	6674	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-41	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	55.5446593622958	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912817	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863586_30868921_30870641_30876185_30876348_30912658
ES.211.37	chr1	-	6864	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	441	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	50.6746323849215	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912979	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902245_30912658
ES.211.38	chr1	-	6612	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	26	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	57.1611131552112	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912949	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658_30912784_30912828
ES.211.4	chr1	-	7415	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTACTTTTATTTTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	30912945	30841423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
ES.211.40	chr1	-	6564	16	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	0	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.283731650448	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30902337	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30844020_30844253_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067
ES.211.42	chr1	-	5337	17	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	7	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.1463715160383	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30912968	30842185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30842474_30844243_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.43	chr1	-	7338	16	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	17	440	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	44.283731650448	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTGTGTGTGATTT	NA	False	NA	-4	True	GATAAA	-13	NA	30912645	30842186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912103
ES.211.44	chr1	-	5012	14	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-253	440	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_12	59.241157930103	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTGTGTGTGATTT	NA	False	NA	-4	True	GATAAA	-13	NA	30913255	30842186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30913160
ES.211.45	chr1	-	6790	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-339	1116	1	91	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGCTCTGTACATTT	NA	False	NA	79	True	NA	NA	NA	30913001	30842535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.47	chr1	-	6535	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	37.2287468475201	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCCTTAATTGGTAAAT	NA	False	NA	-9	True	AATAAA	-19	NA	30912996	30842623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902337_30912658
ES.211.48	chr1	-	6409	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	39.454766143377	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30912980	30842626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30912658
ES.211.49	chr1	-	6586	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30912980	30842626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
ES.211.5	chr1	-	7796	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.884930131645	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTACTTTTATTTTTG	NA	False	NA	-6	True	AATAAA	-14	NA	30912986	30841424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868921_30870641_30876185_30876348_30902067_30902245_30912658
ES.211.50	chr1	-	6455	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	42.7327613066238	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30913259	30842626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30913160
ES.211.51	chr1	-	8945	3	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	48181	1205	-1540	-1	intron_retention	FALSE	canonical	3	174	junction_2	5.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTCCTTAATTGGT	9093	False	NA	-13	True	AATAAA	-15	NA	30854156	30842627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30845024_30845249_30845446_30847803
ES.211.52	chr1	-	6569	17	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.1463715160383	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTCCTTAATTGGT	NA	False	NA	-13	True	AATAAA	-15	NA	30912957	30842627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30843906_30843990_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.53	chr1	-	4522	13	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	43.8180423265729	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTCCTTAATTGGT	NA	False	NA	-13	True	AATAAA	-15	NA	30912973	30842627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
ES.211.54	chr1	-	6749	17	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.605157977925	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATTCCTTAATTGGT	NA	False	NA	-13	True	AATAAA	-15	NA	30912979	30842627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30881383_30881457_30902067_30902337_30912658
ES.211.55	chr1	-	4598	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	45.2966553097303	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTATTCCTTAATTGG	NA	False	NA	-14	True	AATAAA	-14	NA	30912781	30842628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30912658
ES.211.56	chr1	-	6222	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTATTCCTTAATTGG	NA	False	NA	-14	True	AATAAA	-14	NA	30912957	30842628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
ES.211.57	chr1	-	4767	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-276	3076	37	790	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAAAGTGGAGGTGACT	NA	False	NA	NA	False	TATAAA	-30	NA	30912938	30844495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.58	chr1	-	3391	1	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	859	2618	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACATAGTAATAATGCT	NA	False	NA	NA	False	AAAACA	-9	NA	30851757	30848366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30848400_30851800
ES.211.59	chr1	-	2557	2	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	50473	6944	752	2618	internal_fragment	FALSE	canonical	3	175	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACATAGTAATAATGCT	NA	False	NA	NA	False	AAAACA	-9	NA	30851864	30848366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30849912_30850852
ES.211.60	chr1	-	4373	8	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	40.2841945002083	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTGCCAAAAGTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	30912979	30854395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902337_30912658
ES.211.61	chr1	-	4517	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-342	25481	-2	1611	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTCACACAATTTGTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	30913004	30866900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.62	chr1	-	4293	3	FSM	ENSMUSG00000048874.16	ENSMUST00000188780.2	941	3	32	-3384	32	1610	multi-exon	FALSE	canonical	3	35	junction_1	46.5	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCACACAATTTGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	30912943	30866901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30870641_30902067_30902337_30912658
ES.211.63	chr1	-	4399	4	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-5	1609	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	50.7564993101595	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTTCACACAATTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	30912980	30866902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30902067_30902245_30912658
ES.211.64	chr1	-	4111	4	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-177	1532	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	55.934485486743	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGTTTTATATACATG	NA	False	NA	NA	False	AATAAA	-15	NA	30913179	30866979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30902067_30902337_30913160
ES.211.65	chr1	-	4656	3	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	9340	1530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGTGTTTTATATACA	NA	False	NA	NA	False	AATAAA	-13	NA	30892811	30866981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30891976
ES.211.66	chr1	-	2960	4	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	59	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	59.23024752795	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTATTTTTCTTTTGA	NA	False	NA	-6	True	AATAAA	-19	NA	30912497	30868505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30870641_30876185_30876348_30902067_30902337_30912103
ES.211.68	chr1	-	2415	3	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	52	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGGCTATTTTTCTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	30912778	30868507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30870641_30876185_30876348_30912658
ES.211.69	chr1	-	2900	3	FSM	ENSMUSG00000048874.16	ENSMUST00000188780.2	941	3	-184	-1775	-157	1	multi-exon	FALSE	canonical	3	35	junction_1	46.5	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAATGGCTATTTTTCT	NA	False	NA	-11	True	AATAAA	-14	NA	30913159	30868510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30870641_30902067_30902337_30912658
ES.211.7	chr1	-	3453	3	ISM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	54509	369	358	-369	3prime_fragment	FALSE	canonical	3	174	junction_2	5.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTCTTTCAGATCTAA	NA	False	NA	NA	False	AATACA	-7	NA	30847828	30841791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30845024_30845249_30845446_30847803
ES.211.70	chr1	-	2901	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-336	27091	4	1	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAATGGCTATTTTTCT	NA	False	NA	-11	True	AATAAA	-14	NA	30912998	30868510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
ES.211.71	chr1	-	2680	4	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-266	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.23024752795	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAATGGCTATTTTTCT	NA	False	NA	-11	True	AATAAA	-14	NA	30913268	30868510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30902067_30902348_30913160
ES.211.73	chr1	-	2519	4	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	50.7564993101595	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGAATGGCTATTTTT	NA	False	NA	-13	True	AATAAA	-12	NA	30912710	30868512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30902067_30902245_30912658
ES.211.74	chr1	-	2873	4	NNC	ENSMUSG00000048874.16	novel	7561	15	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.23024752795	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGGAATGGCTATTTT	NA	False	NA	-14	True	AATAAA	-11	NA	30912978	30868513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30870641_30876185_30876348_30902067_30902328_30912654
ES.211.75	chr1	-	8660	1	FSM	ENSMUSG00000104315.2	ENSMUST00000192050.2	3035	1	-5332	-293	-5332	293	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCTGTGTAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	30912951	30904291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30904300_30913000
ES.211.76	chr1	-	195	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAATTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	30918407	30918212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_30918200_30918400
ES.211.8	chr1	-	6963	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-4	-487	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTGAAATGTATTTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	30912979	30841909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
ES.211.9	chr1	-	7412	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-339	494	1	-491	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTAAGTGAAATGTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	30913001	30841913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ES.2110.1	chr1	-	178	1	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	182559724	182559546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182559500_182559700
ES.21100.1	chr2	-	3453	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	70	-1076	0	933	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATATTTTTTAAAAAAGG	6146	False	NA	NA	False	NA	NA	NA	181007127	180998549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.12	chr2	-	2058	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	2	-607	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	105.090243046981	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6148	False	NA	-8	True	AATAAA	-25	NA	181007125	181000284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006847_181007011
ES.21100.13	chr2	-	2473	6	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-7	-607	intron_retention	FALSE	canonical	3	258	junction_2	26.2937254872717	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6112	False	NA	-8	True	AATAAA	-25	NA	181007161	181000284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181006192_181006397
ES.21100.14	chr2	-	2323	6	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	123	-606	39	606	intron_retention	FALSE	canonical	3	258	junction_2	26.3393242130469	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCAGTTAGATGGTGGT	6252	False	NA	-10	True	AATAAA	-23	NA	181007021	181000286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103
ES.21100.15	chr2	-	1696	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	1	600	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	103.810069898083	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6147	False	NA	-16	True	AATAAA	-17	NA	181007126	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006116_181006192_181006397_181006505_181007011
ES.21100.16	chr2	-	1807	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	2	600	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	103.469407881494	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6148	False	NA	-16	True	AATAAA	-17	NA	181007125	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005989_181006103_181006192_181006397_181006505_181007011
ES.21100.17	chr2	-	2665	4	NIC	ENSMUSG00000038671.16	novel	1822	5	NA	NA	1	600	intron_retention	FALSE	canonical	1	1	junction_3	137.681597253308	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6130	False	NA	-16	True	AATAAA	-17	NA	181007143	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181003183_181003349_181005806
ES.21100.18	chr2	-	1943	7	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-4	600	intron_retention	FALSE	canonical	0	0	junction_3	112.100649220045	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6125	False	NA	-16	True	AATAAA	-17	NA	181007148	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002863_181003183_181003266_181005806_181006192_181006397_181006505_181007011
ES.21100.19	chr2	-	3496	5	NIC	ENSMUSG00000038671.16	novel	1087	7	NA	NA	-6	600	intron_retention	FALSE	canonical	3	271	junction_4	23.5159520326097	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6154	False	NA	-16	True	AATAAA	-17	NA	181007119	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181003266_181005806_181006192_181006397_181006505_181007011
ES.21100.2	chr2	-	2520	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	36	-109	-7	-34	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCACTAAAGTTAGAGC	6112	False	NA	NA	False	NA	NA	NA	181007161	180999516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.21	chr2	-	1777	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	144	600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.774307285052	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6357	False	NA	-16	True	AATAAA	-17	NA	181006916	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181006733
ES.21100.22	chr2	-	1678	7	FSM	ENSMUSG00000038671.16	ENSMUST00000185118.8	2318	7	-31	671	-12	600	multi-exon	FALSE	canonical	3	22	junction_2	105.887387770635	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6107	False	NA	-16	True	AATAAA	-17	NA	181007166	181000292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.23	chr2	-	3929	4	NIC	ENSMUSG00000038671.16	novel	1822	5	NA	NA	-8	596	intron_retention	FALSE	canonical	3	279	junction_2	23.7954243967663	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCCCTTCAATCAGTT	6111	False	NA	-20	True	AATAAA	-13	NA	181007162	181000296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181002865_181003183_181003266_181005806
ES.21100.24	chr2	-	1731	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-6	596	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	102.697693871531	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCCCTTCAATCAGTT	6113	False	NA	-20	True	AATAAA	-13	NA	181007160	181000296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006497_181007011
ES.21100.25	chr2	-	1762	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	12	595	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	100.366471350888	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATCCCTTCAATCAGT	6172	False	NA	-21	True	AATAAA	-12	NA	181007101	181000297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003349_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.26	chr2	-	2040	7	FSM	ENSMUSG00000038671.16	ENSMUST00000048269.12	1087	7	-30	-923	1	595	multi-exon	FALSE	canonical	3	258	junction_2	25.1291110511737	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATCCCTTCAATCAGT	6130	False	NA	-21	True	AATAAA	-12	NA	181007143	181000297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.27	chr2	-	1231	7	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	1	189	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	130.502447827192	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGTTAATCTCCGCC	6130	False	NA	NA	False	NA	NA	NA	181007143	181000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
ES.21100.28	chr2	-	974	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	-7	1480	-7	2	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGTATTCAGAGA	6069	False	NA	NA	False	NA	NA	NA	181007204	181001105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.29	chr2	-	1676	3	NIC	ENSMUSG00000038671.16	novel	1822	5	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_2	151.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6140	False	NA	NA	False	NA	NA	NA	181007133	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181005806
ES.21100.3	chr2	-	2354	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGGGTGACATTGACT	6107	False	NA	-19	True	AGTAAA	-15	NA	181007166	180999674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
ES.21100.30	chr2	-	2173	4	ISM	ENSMUSG00000038671.16	ENSMUST00000048269.12	1087	7	-45	-114	-4	1	intron_retention	FALSE	canonical	3	258	junction_2	32.355662392986	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6115	False	NA	NA	False	NA	NA	NA	181007158	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181001355_181001431_181001533_181002793_181003266_181005806
ES.21100.31	chr2	-	856	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	102.697693871531	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6178	False	NA	NA	False	NA	NA	NA	181007095	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006497_181007011
ES.21100.32	chr2	-	1270	5	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	2	1	intron_retention	FALSE	canonical	3	22	junction_2	124.178047576856	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6121	False	NA	NA	False	NA	NA	NA	181007152	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181006505_181007011
ES.21100.33	chr2	-	782	7	NNC	ENSMUSG00000038671.16	novel	2318	7	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	138.169782835788	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6176	False	NA	NA	False	NA	NA	NA	181007097	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005890_181006116_181006192_181006397_181006505_181007011
ES.21100.34	chr2	-	941	7	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	137.924798350405	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTAGGTATTCAGAG	6129	False	NA	NA	False	NA	NA	NA	181007144	181001106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181005989_181006103_181006192_181006397_181006505_181007011
ES.21100.36	chr2	-	1266	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	105.090243046981	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAGTGTAGGTATTCA	6115	False	NA	NA	False	NA	NA	NA	181007158	181001109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006847_181007011
ES.21100.37	chr2	-	1009	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	103.469407881494	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAGTGTAGGTATTCA	6129	False	NA	NA	False	NA	NA	NA	181007144	181001109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005989_181006103_181006192_181006397_181006505_181007011
ES.21100.38	chr2	-	1782	6	NNC	ENSMUSG00000038671.16	novel	1087	7	NA	NA	1	-4	intron_retention	FALSE	canonical	1	2	junction_5	121.320402241338	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAAAAGTGTAGGTATT	6130	False	NA	NA	False	NA	NA	NA	181007143	181001111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181003266_181005806_181006192_181006397_181006847_181007011
ES.21100.4	chr2	-	2342	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	54	51	1	1	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGGGTGACATTGA	6130	False	NA	-21	True	AGTAAA	-13	NA	181007143	180999676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.40	chr2	-	1181	7	FSM	ENSMUSG00000038671.16	ENSMUST00000048269.12	1087	7	-44	-50	-3	50	multi-exon	FALSE	canonical	3	258	junction_2	25.1291110511737	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGTTCATTCTTTTA	6116	False	NA	NA	False	NA	NA	NA	181007157	181001170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.5	chr2	-	2380	8	NNC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	104.168427196007	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGGGTGACATTGA	6117	False	NA	-21	True	AGTAAA	-13	NA	181007156	180999676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181001355_181001431_181001533_181002793_181002890_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.6	chr2	-	2254	7	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	110.885326150738	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGGGGTGACATTGA	6130	False	NA	-21	True	AGTAAA	-13	NA	181007143	180999676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006397_181006505_181007011
ES.21100.7	chr2	-	2478	6	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	1	-6	intron_retention	FALSE	canonical	3	22	junction_2	113.957886958297	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCTAAAGTTGGGGTG	6130	False	NA	-28	True	AGTAAA	-6	NA	181007143	180999683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181003183_181003266_181005806_181006192_181006397_181006505_181007011
ES.21100.8	chr2	-	1767	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	25	655	-18	-603	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGATGGTGGTTCCCTA	6101	False	NA	-4	True	AATAAA	-29	NA	181007172	181000280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ES.21100.9	chr2	-	2817	5	NIC	ENSMUSG00000038671.16	novel	1087	7	NA	NA	11	-607	intron_retention	FALSE	canonical	3	258	junction_2	28.0390352901094	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTAGATGGTGGTTC	6087	False	NA	-8	True	AATAAA	-25	NA	181007186	181000284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181001355_181001431_181001533_181002793_181003266_181005806_181006192_181006397
ES.21101.1	chr2	-	175	1	Intergenic	novelGene_17505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	6291	False	NA	NA	False	NA	NA	NA	181014290	181014115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181014100_181014300
ES.21102.1	chr2	-	4198	1	Genic_Genomic	ENSMUSG00000027583.14	novel	NA	NA	NA	NA	34451	2022	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAATACAAAAACAAAA	7573	False	NA	NA	False	NA	NA	NA	181031730	181027532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_181027500_181031700
ES.21102.2	chr2	-	5329	5	FSM	ENSMUSG00000027583.14	ENSMUST00000029106.13	5309	5	-22	2	-22	-2	multi-exon	FALSE	canonical	3	8	junction_1	10.688779163216	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGCCTCCTGTGTGGT	8516	False	NA	NA	False	AATAAA	-21	NA	181101241	181029556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181033262_181037242_181037419_181053488_181053774_181065211_181066182_181101048
ES.21102.3	chr2	-	4454	5	FSM	ENSMUSG00000027583.14	ENSMUST00000029106.13	5309	5	4	851	4	-851	multi-exon	FALSE	canonical	3	8	junction_1	10.688779163216	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGATTACATTTCACA	8542	False	NA	NA	False	AATAAA	-24	NA	181101215	181030405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181033262_181037242_181037419_181053488_181053774_181065211_181066182_181101048
ES.21102.4	chr2	-	5857	6	NNC	ENSMUSG00000027583.14	novel	2577	3	NA	NA	3	-5986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0811140172071	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTTGTTTTGT	8541	False	NA	NA	False	AATAAA	-6	NA	181101216	181038664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181040385_181044159_181046829_181046921_181046967_181053488_181053774_181065211_181066182_181101048
ES.21102.5	chr2	-	2633	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	-57	1	-57	-1	multi-exon	FALSE	canonical	3	29	junction_1	2	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTCTGCTCTCTTTAT	8481	False	NA	-3	True	AATAAA	-16	NA	181101276	181052338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181053774_181065211_181066182_181101048
ES.21102.6	chr2	-	157	1	Intergenic	novelGene_17506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	181055916	181055759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181055800_181055900
ES.21102.7	chr2	-	201	1	Intergenic	novelGene_17507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGAGACATCTCTTC	NA	False	NA	NA	False	NA	NA	NA	181071957	181071756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181071800_181072000
ES.21102.8	chr2	-	3085	1	Genic_Genomic	ENSMUSG00000027583.14	novel	NA	NA	NA	NA	-64	-32178	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATTTCCCTTTGAA	8474	False	NA	NA	False	NA	NA	NA	181101283	181098198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr2_-_181098200_181101300
ES.21103.1	chr2	-	155	1	Intergenic	novelGene_17508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAACAAATAAA	4014	False	NA	NA	False	NA	NA	NA	181131248	181131093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181131100_181131200
ES.21104.1	chr2	+	229	1	Intergenic	novelGene_17509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTTTGCTCATCTG	NA	False	NA	NA	False	NA	NA	NA	181137855	181138084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181137900_181138100
ES.21105.1	chr2	+	1551	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	-10	2062	-9	-352	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAGAATTTTATTCT	NA	False	NA	30	True	AATAAA	-26	NA	181138947	181157697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.12	chr2	+	3317	7	NNC	ENSMUSG00000000827.19	novel	854	8	NA	NA	0	-226	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	419.317302290282	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCCTGTCATACAGTC	NA	False	NA	NA	False	NA	NA	NA	181138975	181159529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143851_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ES.21105.13	chr2	+	3887	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	2	-939	0	344	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTGGCCATTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	181138975	181160103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ES.21105.14	chr2	+	3872	7	NNC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	0	343	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	386.061487618517	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGGCCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	181138975	181160102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143851_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.15	chr2	+	1411	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	-2	2066	-2	-360	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATGATACAATGTAGAAT	NA	False	NA	22	True	AATAAA	-18	NA	181138977	181157689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
ES.21105.17	chr2	+	897	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	0	2578	0	-3	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACTGTGCCATCCTTT	NA	False	NA	33	True	CATAAA	-30	NA	181138979	181157177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
ES.21105.18	chr2	+	5787	6	ISM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	23	1208	1	502	intron_retention	FALSE	canonical	3	669	junction_5	160.48750730197	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGTTTGGTCTGTC	NA	False	NA	11	True	AATAAA	-25	NA	181138980	181158551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366
ES.21105.19	chr2	+	3921	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	23	-341	1	341	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCTTGGCCATTTTCA	NA	False	NA	NA	False	NA	NA	NA	181138980	181160100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.2	chr2	+	1497	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	-14	1467	2	-352	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAGAATTTTATTCT	NA	False	NA	30	True	AATAAA	-26	NA	181138959	181157697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ES.21105.20	chr2	+	1338	6	NIC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	4	-320	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	407.746195567782	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCAGTACCAGTTA	NA	False	NA	62	True	NA	NA	NA	181138983	181157729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.21	chr2	+	2333	8	NIC	ENSMUSG00000000827.19	novel	985	9	NA	NA	5	500	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	452.340534535292	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	9	True	AATAAA	-23	NA	181138984	181158549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ES.21105.22	chr2	+	985	8	NNC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	361.945818473158	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGTGCCATCCTTTCA	NA	False	NA	35	True	CATAAA	-32	NA	181138984	181157179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143836_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.24	chr2	+	2324	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	11	615	5	500	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	9	True	AATAAA	-23	NA	181138984	181158549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ES.21105.25	chr2	+	6237	6	NIC	ENSMUSG00000000827.19	novel	2950	7	NA	NA	-5	-356	intron_retention	FALSE	canonical	3	744	junction_4	173.807479700961	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACAATGTAGAATTTTA	NA	False	NA	26	True	AATAAA	-22	NA	181138986	181157693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181154881_181156872
ES.21105.26	chr2	+	2301	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	0	-502	0	502	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGTTTGGTCTGTC	NA	False	NA	11	True	AATAAA	-25	NA	181138991	181158551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.27	chr2	+	2357	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	36	1210	2	500	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	9	True	AATAAA	-23	NA	181138993	181158549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.28	chr2	+	3337	7	NNC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	2	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	458.243991292363	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGGCCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	181138993	181160102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872_181159592_181160062
ES.21105.29	chr2	+	1855	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	38	1710	4	0	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGCTGTCATCTTT	NA	False	NA	NA	False	AATGAA	-44	NA	181138995	181158049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.3	chr2	+	979	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	-14	1985	2	-1	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGTGCCATCCTTTCA	NA	False	NA	35	True	CATAAA	-32	NA	181138959	181157179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ES.21105.30	chr2	+	1012	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-28	1	4	-1	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGTGCCATCCTTTCA	NA	False	NA	35	True	CATAAA	-32	NA	181138995	181157179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ES.21105.32	chr2	+	2382	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-28	-1369	4	500	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	9	True	AATAAA	-23	NA	181138995	181158549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ES.21105.33	chr2	+	3392	5	ISM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	16	2059	4	-353	intron_retention	FALSE	canonical	3	271	junction_3	374.472545722647	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTAGAATTTTATTC	NA	False	NA	29	True	AATAAA	-25	NA	181138995	181157696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831
ES.21105.34	chr2	+	5659	7	NIC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	7	501	intron_retention	FALSE	canonical	3	744	junction_4	175.235714269539	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATTTGTTTGGTCTGT	NA	False	NA	10	True	AATAAA	-24	NA	181138998	181158550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181153409_181154831_181154881_181156872
ES.21105.35	chr2	+	4716	9	Fusion	ENSMUSG00000000827.19_ENSMUSG00000000826.17	novel	985	9	NA	NA	8	637	intron_retention	FALSE	canonical	1	5	junction_4	395.379485431402	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	181138999	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.37	chr2	+	4650	5	ISM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-4	3033	-2	-702	intron_retention	FALSE	canonical	3	744	junction_4	148.409063065569	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	181139019	181154147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958
ES.21105.38	chr2	+	901	7	NNC	ENSMUSG00000000827.19	novel	985	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	386.061487618517	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGTGCCATCCTTTCA	NA	False	NA	35	True	CATAAA	-32	NA	181139023	181157179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143851_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.39	chr2	+	2431	9	NNC	ENSMUSG00000000827.19	novel	985	9	NA	NA	0	500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	406.506995634761	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCATTTGTTTGGTCTG	NA	False	NA	9	True	AATAAA	-23	NA	181139023	181158549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143364_181143469_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.4	chr2	+	1463	7	NNC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	2	-365	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	425.682850123057	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGTTATGATACAATGT	NA	False	NA	17	True	AATAAA	-13	NA	181138959	181157684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153369_181153409_181154831_181154881_181156872
ES.21105.40	chr2	+	3527	8	NNC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	361.879165761508	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTAAGGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	181139030	181159761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144724_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.41	chr2	+	795	7	NIC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	10	-7	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	344.170217899354	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGACCACTGTGCCATC	NA	False	NA	29	True	CATAAA	-26	NA	181139033	181157173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.42	chr2	+	3336	8	NNC	ENSMUSG00000000827.19	novel	3603	8	NA	NA	32	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	395.834329393663	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGGCCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	181139055	181160102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872_181159595_181160064
ES.21105.44	chr2	+	4051	2	FSM	ENSMUSG00000000827.19	ENSMUST00000130261.2	764	2	-3236	-51	-3236	-3	multi-exon	FALSE	canonical	3	1175	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACTGTGCCATCCTTT	NA	False	NA	33	True	CATAAA	-30	NA	181151134	181157177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181154881_181156872
ES.21105.45	chr2	+	4546	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-181	-637	-140	637	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	6865	False	NA	16	True	AATAAA	-17	NA	181162137	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.46	chr2	+	3217	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-173	684	-132	-667	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATATGTAGATCAGTTTC	6873	False	NA	NA	False	AATAAA	-21	NA	181162145	181193358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.47	chr2	+	4587	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-128	637	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	6877	False	NA	16	True	AATAAA	-17	NA	181162149	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.48	chr2	+	4347	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	-16	2247	-16	637	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	6989	False	NA	16	True	AATAAA	-17	NA	181162261	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.49	chr2	+	4386	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	-68	-654	-2	637	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7003	False	NA	16	True	AATAAA	-17	NA	181162275	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.5	chr2	+	3841	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	-19	-347	3	343	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGGCCATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	181138960	181160102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
ES.21105.50	chr2	+	4195	7	NNC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	11	635	intron_retention	FALSE	non_canonical	0	0	junction_6	85.9198593005262	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7016	False	NA	14	True	AATAAA	-15	NA	181162288	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181193302_181193499
ES.21105.51	chr2	+	5013	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-22	-1263	19	1263	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGTGTCTTATTAGTGA	7024	False	NA	NA	False	AATAAA	-39	NA	181162296	181195305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.53	chr2	+	4294	8	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	19	637	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	79.3236717377555	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7024	False	NA	16	True	AATAAA	-17	NA	181162296	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
ES.21105.54	chr2	+	6557	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	20	1	20	-1	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTTTGTCTTTTTAAT	7025	False	NA	NA	False	NA	NA	NA	181162297	181196925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.55	chr2	+	4163	6	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	20	635	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	77.7261860636427	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7025	False	NA	14	True	AATAAA	-15	NA	181162297	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065_181191814_181191959
ES.21105.56	chr2	+	1132	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	-20	2616	-20	43	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTCTGTGTTGTGGA	7026	False	NA	65	True	NA	NA	NA	181162298	181191426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.57	chr2	+	5426	4	NIC	ENSMUSG00000000826.17	novel	6578	5	NA	NA	-20	637	intron_retention	FALSE	canonical	3	111	junction_3	50.2283673723215	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7026	False	NA	16	True	AATAAA	-17	NA	181162298	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181190635_181191065
ES.21105.58	chr2	+	2957	8	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-9	-670	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	79.3236717377555	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCATATGTAGATCAGT	7037	False	NA	NA	False	AATAAA	-18	NA	181162309	181193355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
ES.21105.59	chr2	+	3586	5	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-2	-978	intron_retention	FALSE	canonical	3	78	junction_4	63.4724349619581	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAATGAGAAATCT	7044	False	NA	NA	False	NA	NA	NA	181162316	181193047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.6	chr2	+	1681	6	NIC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	407.746195567782	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGCTGTCATCTTTTC	NA	False	NA	NA	False	NA	NA	NA	181138962	181158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21105.60	chr2	+	1042	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	-24	2646	1	-4	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTCTTCTGTTTTATCC	7047	False	NA	18	True	TTTAAA	-14	NA	181162319	181191379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.61	chr2	+	5041	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	1	1261	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATAAGTGTCTTATTAGT	7047	False	NA	NA	False	AATAAA	-37	NA	181162319	181195303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.62	chr2	+	4904	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	52	1622	11	1262	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGTGTCTTATTAGTG	7057	False	NA	NA	False	AATAAA	-38	NA	181162329	181195304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.63	chr2	+	4200	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-8	635	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7063	False	NA	14	True	AATAAA	-15	NA	181162335	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
ES.21105.64	chr2	+	5102	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-6	635	intron_retention	FALSE	canonical	3	29	junction_6	66.1196306368658	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7065	False	NA	14	True	AATAAA	-15	NA	181162337	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
ES.21105.65	chr2	+	974	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	61	5543	-5	0	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7066	False	NA	22	True	TTTAAA	-18	NA	181162338	181191383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.66	chr2	+	2803	6	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-5	-667	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	77.7261860636427	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATATGTAGATCAGTTTC	7066	False	NA	NA	False	AATAAA	-21	NA	181162338	181193358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065_181191814_181191959
ES.21105.67	chr2	+	5727	4	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-5	631	intron_retention	FALSE	canonical	3	86	junction_3	60.6043636126054	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTGTGGTTTCTTG	7066	False	NA	10	True	AATAAA	-11	NA	181162338	181194673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181190635_181190718
ES.21105.68	chr2	+	4272	5	NNC	ENSMUSG00000000826.17	novel	6578	5	NA	NA	-3	635	intron_retention	FALSE	non_canonical	0	0	junction_2	85.5171766372113	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7068	False	NA	14	True	AATAAA	-15	NA	181162340	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181188163_181188288_181189132_181189347_181190462_181190635_181191065
ES.21105.69	chr2	+	4409	8	NNC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	-2	635	intron_retention	FALSE	canonical	0	0	junction_2	89.4456852634318	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7069	False	NA	14	True	AATAAA	-15	NA	181162341	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181163027_181163081_181182393_181182410_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.7	chr2	+	1552	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-56	-511	-6	-358	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATACAATGTAGAATTT	NA	False	NA	24	True	AATAAA	-20	NA	181138967	181157691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ES.21105.70	chr2	+	1122	7	NNC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.6051736898616	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGTTTTATCCTTTT	7073	False	NA	22	True	TTTAAA	-18	NA	181162345	181191383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181182329_181182410_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.71	chr2	+	6630	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	6	-4	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACCTGGTTTGTCTTTTT	7077	False	NA	NA	False	NA	NA	NA	181162349	181196922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.72	chr2	+	2869	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	6	-665	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGATCAGTTTCAA	7077	False	NA	NA	False	AATAAA	-23	NA	181162349	181193360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
ES.21105.73	chr2	+	6576	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	32	-2880	7	-4	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACCTGGTTTGTCTTTTT	7078	False	NA	NA	False	NA	NA	NA	181162350	181196922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.74	chr2	+	4338	6	NNC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	7	637	intron_retention	FALSE	canonical	0	0	junction_1	101.85597675149	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7078	False	NA	16	True	AATAAA	-17	NA	181162350	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181182329_181182410_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.75	chr2	+	4242	6	NNC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	7	634	intron_retention	FALSE	canonical	0	0	junction_3	80.7603863289422	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTGGTTTCTTGAAG	7078	False	NA	13	True	AATAAA	-14	NA	181162350	181194676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181188163_181188282_181189132_181189259_181190462_181190635_181190718_181190794_181191065
ES.21105.76	chr2	+	4384	7	NNC	ENSMUSG00000000826.17	novel	3664	6	NA	NA	12	635	intron_retention	FALSE	canonical	0	0	junction_2	95.8634735212299	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	7083	False	NA	14	True	AATAAA	-15	NA	181162355	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181162491_181163027_181163081_181182329_181182410_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.77	chr2	+	4143	7	NIC	ENSMUSG00000000826.17	novel	3664	6	NA	NA	23	631	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	83.5144698041403	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGCTGTGGTTTCTTG	7094	False	NA	10	True	AATAAA	-11	NA	181162366	181194673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065_181191814_181191959
ES.21105.78	chr2	+	4659	4	ISM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	62	-637	37	637	intron_retention	FALSE	canonical	3	170	junction_1	29.7097066068763	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7108	False	NA	16	True	AATAAA	-17	NA	181162380	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462
ES.21105.79	chr2	+	6507	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	58	-2901	58	0	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTGTCTTTTTAATT	7129	False	NA	NA	False	NA	NA	NA	181162401	181196926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.8	chr2	+	5627	6	NIC	ENSMUSG00000000827.19	novel	1799	7	NA	NA	-6	498	intron_retention	FALSE	canonical	3	271	junction_3	324.117509554791	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATCCATTTGTTTGGTC	NA	False	NA	7	True	AATAAA	-21	NA	181138967	181158547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181153409_181154831_181154881_181156872
ES.21105.80	chr2	+	4364	6	NIC	ENSMUSG00000000826.17	novel	934	5	NA	NA	3	637	intron_retention	FALSE	canonical	1	6	junction_1	90.7709204536343	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTTCTTGAAGTGT	7335	False	NA	16	True	AATAAA	-17	NA	181162607	181194679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181162779_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ES.21105.81	chr2	+	3911	1	Intergenic	novelGene_17510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACTGTACACTTAAAC	NA	False	NA	NA	False	NA	NA	NA	181172038	181175949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181172000_181175900
ES.21105.82	chr2	+	7811	4	ISM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	22125	-652	-6650	635	3prime_fragment	FALSE	canonical	3	111	junction_3	57.5171472017017	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGTTTCTTGAAGT	NA	False	NA	14	True	AATAAA	-15	NA	181184468	181194677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181188282_181189132_181189347_181190462_181190635_181191065
ES.21105.9	chr2	+	1012	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	11	2580	-5	-1	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGTGCCATCCTTTCA	NA	False	NA	35	True	CATAAA	-32	NA	181138968	181157179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ES.21106.1	chr2	-	2604	1	Antisense	novelGene_ENSMUSG00000088378.4_AS_novelGene_ENSMUSG00000000827.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCACAGTTTCAGAAT	1096	False	NA	NA	False	NA	NA	NA	181156701	181154097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_181154100_181156700
ES.21107.1	chr2	-	179	1	Intergenic	novelGene_17511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTGATGGC	NA	False	NA	-12	True	NA	NA	NA	181177259	181177080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181177100_181177300
ES.21107.2	chr2	-	176	2	Antisense	novelGene_ENSMUSG00000000826.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTGATGGC	2190	False	NA	-12	True	NA	NA	NA	181200820	181177080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_181177178_181200741
ES.21107.3	chr2	-	176	2	Antisense	novelGene_ENSMUSG00000000826.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	211	junction_1	0	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTGATGGC	2190	False	NA	-12	True	NA	NA	NA	181200820	181177080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_181177208_181200771
ES.21107.4	chr2	-	159	2	Antisense	novelGene_ENSMUSG00000000826.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	-31	True	NA	NA	NA	181182158	181177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_181177138_181182037
ES.21107.5	chr2	-	3328	1	Intergenic	novelGene_17512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAATACTGAATGCAAGAA	NA	False	NA	NA	False	NA	NA	NA	181181355	181178027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181178000_181181400
ES.21107.6	chr2	-	195	1	Intergenic	novelGene_17513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATAAGTGCACTCACTG	NA	False	NA	NA	False	NA	NA	NA	181182159	181181964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181182000_181182200
ES.21107.7	chr2	-	224	1	Intergenic	novelGene_17514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATAAAAGGTAGACTAA	2188	False	NA	NA	False	NA	NA	NA	181200822	181200598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181200600_181200800
ES.21108.1	chr2	-	175	2	Intergenic	novelGene_17515	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTCAACCACA	7291	False	NA	NA	False	NA	NA	NA	181205836	181201184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181201193_181205669
ES.21108.2	chr2	-	188	1	Intergenic	novelGene_17516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATGCCTTGGCTTT	7728	False	NA	NA	False	NA	NA	NA	181205399	181205211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181205200_181205400
ES.21108.3	chr2	-	200	1	Intergenic	novelGene_17517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGATGTAGCCGGGTGT	7290	False	NA	NA	False	AAAAAG	-4	NA	181205837	181205637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181205600_181205800
ES.21109.1	chr2	+	148	1	Intergenic	novelGene_17518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAATAAATCTTTAAAA	5622	False	NA	NA	False	NA	NA	NA	181206800	181206948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181206800_181206900
ES.2111.1	chr1	+	3266	9	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.91762950507832	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182591573	182724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714898_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.11	chr1	+	2771	1	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTTAAAAACTAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	182707487	182710258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_182707500_182710300
ES.2111.12	chr1	+	5001	4	ISM	ENSMUSG00000038576.16	ENSMUST00000085724.5	2983	8	119539	18	119539	-18	3prime_fragment	FALSE	canonical	3	22	junction_1	2.62466929133727	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAAGAAAACG	NA	False	NA	NA	False	NA	NA	NA	182711998	182724138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.2	chr1	+	3162	9	FSM	ENSMUSG00000038576.16	ENSMUST00000153348.8	1898	9	95	-1359	95	0	multi-exon	FALSE	canonical	3	16	junction_5	5.55512151082224	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182591671	182724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.4	chr1	+	3162	10	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.8977121983832	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182591752	182724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182660627_182660841_182660972_182661054_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.5	chr1	+	2236	4	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	184	1792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.9283882771841	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAATCAATCAAACA	NA	False	NA	NA	False	NA	NA	NA	182591760	182662611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182660627_182660841_182660972
ES.2111.6	chr1	+	3018	9	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	190	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	9.61769203083567	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGAAGTGTGACTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	182591766	182724159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714956_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.7	chr1	+	3248	11	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	-184	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.2211951048307	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182591775	182724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182622328_182622438_182660627_182660841_182660972_182661054_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ES.2111.8	chr1	+	2564	3	NNC	ENSMUSG00000038576.16	novel	1898	9	NA	NA	-175	-60931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCTATGGCTTTAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	182591784	182599862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182591962_182592570_182592754_182597658
ES.2111.9	chr1	+	1789	3	NNC	ENSMUSG00000038576.16	novel	559	3	NA	NA	34	-61705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	182591993	182599088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_182592170_182592570_182592754_182597658
ES.21110.1	chr2	+	211	1	Intergenic	novelGene_17519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCCTGACCTCCAGCT	7154	False	NA	NA	False	AAAACA	-9	NA	181208332	181208543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181208300_181208500
ES.21111.1	chr2	-	3874	13	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	33.6116505925483	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGTGGCAGAATGTAACC	4551	False	NA	1	True	AATAAA	-23	NA	181223797	181210941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181214280_181214866_181214929_181215007_181215251_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.10	chr2	-	1856	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.5776269109327	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4529	False	NA	-6	True	AATAAA	-16	NA	181223819	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.12	chr2	-	2073	11	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	7	-4	intron_retention	FALSE	canonical	3	17	junction_5	30.833261261177	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4554	False	NA	-6	True	AATAAA	-16	NA	181223794	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.13	chr2	-	1763	14	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	30.2142252636738	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4566	False	NA	-6	True	AATAAA	-16	NA	181223782	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.14	chr2	-	1984	12	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-13	-4	intron_retention	FALSE	canonical	3	17	junction_5	29.9608560051609	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4564	False	NA	-6	True	AATAAA	-16	NA	181223784	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.15	chr2	-	1897	13	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_4	42.2416165252546	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4575	False	NA	-6	True	AATAAA	-16	NA	181223773	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181212027_181212101_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.16	chr2	-	1800	14	FSM	ENSMUSG00000089917.8	ENSMUST00000129469.8	1782	14	-11	-7	-5	-4	multi-exon	FALSE	canonical	3	17	junction_7	28.5913877876066	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4572	False	NA	-6	True	AATAAA	-16	NA	181223776	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.17	chr2	-	1933	13	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	17	junction_6	29.3976567471325	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4544	False	NA	-6	True	AATAAA	-16	NA	181223804	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.18	chr2	-	2721	11	NIC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	84	junction_10	13.7072973266067	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4574	False	NA	-6	True	AATAAA	-16	NA	181223774	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181211418_181211488_181212196_181212292_181212392_181214262_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.19	chr2	-	677	4	FSM	ENSMUSG00000089917.8	ENSMUST00000146823.8	676	4	-2	1	-2	-1	multi-exon	FALSE	canonical	3	84	junction_3	13.0724477007517	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCCTGTATGGTGCG	4575	False	NA	NA	False	ATTAAA	-20	NA	181223773	181216078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.2	chr2	-	4378	12	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	34.8711915483254	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGTGTGGCAGAATGTAAC	4576	False	NA	0	True	AATAAA	-22	NA	181223772	181210942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211689_181211825_181211925_181211989_181212101_181212196_181212292_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216831_181223648
ES.21111.3	chr2	-	3691	13	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_5	49.1604515845817	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTGTGGCAGAATGTAA	4554	False	NA	-1	True	AATAAA	-21	NA	181223794	181210943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211989_181212099_181212196_181212292_181212392_181212961_181213051_181213295_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.4	chr2	-	4671	9	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	84	junction_8	13.9171656597168	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4570	False	NA	-2	True	AATAAA	-20	NA	181223778	181210944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181212196_181212292_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.5	chr2	-	3732	12	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	1212	0	intron_retention	FALSE	canonical	0	0	junction_5	45.8174603117795	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	6141	False	NA	-2	True	AATAAA	-20	NA	181222207	181210944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181212196_181212292_181212349_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181220339
ES.21111.6	chr2	-	1915	13	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_6	33.6430403897547	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4575	False	NA	-6	True	AATAAA	-16	NA	181223773	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.7	chr2	-	4387	12	NIC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	84	junction_11	14.067135370098	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	4565	False	NA	-6	True	AATAAA	-16	NA	181223783	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ES.21111.8	chr2	-	1891	13	NNC	ENSMUSG00000089917.8	novel	1782	14	NA	NA	460	-4	intron_retention	FALSE	canonical	0	0	junction_6	43.5305607846054	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	5389	False	NA	-6	True	AATAAA	-16	NA	181222959	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181222858
ES.21111.9	chr2	-	2281	15	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	481	-4	intron_retention	FALSE	canonical	0	0	junction_6	52.3357001501277	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCGTGTGGCAGAA	5410	False	NA	-6	True	AATAAA	-16	NA	181222938	181210948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181212961_181213051_181213295_181213618_181214853_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181222858
ES.21112.1	chr2	-	5811	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-9	3	intron_retention	FALSE	canonical	2	4	junction_9	14.2229860905976	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCTGAGTTTGTG	7474	False	NA	2	True	AATAAA	-29	NA	181234560	181223892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.10	chr2	-	5299	15	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	56	0	intron_retention	TRUE	canonical	0	0	junction_14	18.4341076955358	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7539	False	NA	-1	True	AATAAA	-26	NA	181234495	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232652_181232779_181234213
ES.21112.11	chr2	-	5794	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	20	0	intron_retention	FALSE	canonical	3	14	junction_15	12.4357906418888	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7458	False	NA	-1	True	AATAAA	-26	NA	181234576	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.12	chr2	-	5518	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-13	0	intron_retention	FALSE	canonical	1	2	junction_5	15.541199724889	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7470	False	NA	-1	True	AATAAA	-26	NA	181234564	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.14	chr2	-	5533	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_14	14.7714439224998	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7483	False	NA	-1	True	AATAAA	-26	NA	181234551	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232652_181232779_181234206
ES.21112.15	chr2	-	5684	17	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	14	junction_13	13.0574152783007	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTTGTGTGGCTGAGT	7473	False	NA	-3	True	AATAAA	-24	NA	181234561	181223897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.16	chr2	-	6785	11	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	50	-1	intron_retention	FALSE	canonical	0	0	junction_3	17.4152232256724	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	7533	False	NA	-4	True	AATAAA	-23	NA	181234501	181223898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181229897_181230006_181230100_181230188_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
ES.21112.17	chr2	-	5475	17	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-131	-1	intron_retention	FALSE	canonical	0	0	junction_16	14.7042457729052	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	7307	False	NA	-4	True	AATAAA	-23	NA	181234727	181223898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234580
ES.21112.18	chr2	-	5328	15	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	296	-2	intron_retention	FALSE	canonical	1	2	junction_5	16.778417867083	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGATTTTGTGTGGCTGA	7779	False	NA	-5	True	AATAAA	-22	NA	181234255	181223899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.19	chr2	-	6940	12	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	37	-3	intron_retention	FALSE	canonical	3	14	junction_11	13.9509175029298	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGATTTTGTGTGGCTG	7520	False	NA	-6	True	AATAAA	-21	NA	181234514	181223900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228614_181228839_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181232406_181232652_181232779_181234206
ES.21112.2	chr2	-	7091	11	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-15	2	intron_retention	FALSE	canonical	3	14	junction_10	12.4519074843977	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGCTGAGTTTGT	7468	False	NA	1	True	AATAAA	-28	NA	181234566	181223893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181229693_181229773_181229873_181230006_181230100_181230188_181230595_181230698_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.20	chr2	-	5548	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	21	-3	intron_retention	FALSE	canonical	3	4	junction_15	13.7365691980688	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGATTTTGTGTGGCTG	7459	False	NA	-6	True	AATAAA	-21	NA	181234575	181223900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
ES.21112.21	chr2	-	5421	15	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	54	-4	intron_retention	FALSE	canonical	1	1	junction_5	15.504443076165	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGATTTTGTGTGGCT	7537	False	NA	-7	True	AATAAA	-20	NA	181234497	181223901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181228918_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.22	chr2	-	5605	15	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-13	-4	intron_retention	FALSE	canonical	1	2	junction_5	15.361129050766	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGATTTTGTGTGGCT	7470	False	NA	-7	True	AATAAA	-20	NA	181234564	181223901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.23	chr2	-	5710	17	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-11	-5	intron_retention	FALSE	canonical	2	4	junction_9	14.5815326269223	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGGATTTTGTGTGGC	7472	False	NA	-8	True	AATAAA	-19	NA	181234562	181223902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.24	chr2	-	5539	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-5	-23	intron_retention	FALSE	canonical	2	4	junction_9	15.3269551951963	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGATTTTTTTTTT	7478	False	NA	-26	True	AATAAA	-1	NA	181234556	181223920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
ES.21112.25	chr2	-	5568	15	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	18	-23	intron_retention	FALSE	canonical	0	0	junction_9	16.4030858221798	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGATTTTTTTTTT	7456	False	NA	-26	True	AATAAA	-1	NA	181234578	181223920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230511_181230595_181230698_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234446
ES.21112.26	chr2	-	4742	13	NNC	ENSMUSG00000000823.17	novel	5357	15	NA	NA	-467	-23	intron_retention	FALSE	canonical	0	0	junction_9	14.834971819619	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGATTTTTTTTTT	9529	False	NA	-26	True	AATAAA	-1	NA	181231547	181223920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230408_181230595_181230698_181230771_181230871_181231081_181231165
ES.21112.27	chr2	-	5525	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-3	-23	intron_retention	FALSE	canonical	0	0	junction_13	14.9651446887611	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGATTTTTTTTTT	7480	False	NA	-26	True	AATAAA	-1	NA	181234554	181223920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181232262_181232406_181232652_181232779_181234206
ES.21112.28	chr2	-	5581	15	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-10	-35	intron_retention	FALSE	canonical	1	1	junction_6	17.919462683271	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCAAATAAATGTTTATT	7473	False	NA	-38	True	ATTAAA	-7	NA	181234561	181223932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229645_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232652_181232779_181234206
ES.21112.29	chr2	-	3415	16	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	308	441	intron_retention	FALSE	canonical	3	14	junction_15	12.4357906418888	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGAAAGAGCTCTGTGT	7791	False	NA	NA	False	NA	NA	NA	181234243	181225941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.3	chr2	-	5241	17	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	55	2	intron_retention	FALSE	canonical	0	0	junction_3	17.7477991593324	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGCTGAGTTTGT	7538	False	NA	1	True	AATAAA	-28	NA	181234496	181223893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228172_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231324_181231845_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.30	chr2	-	1906	12	ISM	ENSMUSG00000000823.17	ENSMUST00000128553.8	5357	15	1513	3072	-120	1	internal_fragment	FALSE	canonical	3	20	junction_8	10.7603496210366	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTTGTTTAGTTG	9876	False	NA	NA	False	AATAAA	-19	NA	181231200	181226969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165
ES.21112.4	chr2	-	6670	14	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_5	17.7657339216579	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGCTGAGTTTGT	7482	False	NA	1	True	AATAAA	-28	NA	181234552	181223893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228614_181228839_181229693_181229773_181229897_181230006_181230100_181230188_181230314_181230417_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.5	chr2	-	5640	15	NIC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-13	1	intron_retention	FALSE	canonical	3	7	junction_13	14.3647811948359	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGGCTGAGTTTG	7470	False	NA	0	True	AATAAA	-27	NA	181234564	181223894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232652_181232779_181234206
ES.21112.7	chr2	-	5442	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_5	15.668226872666	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7429	False	NA	-1	True	AATAAA	-26	NA	181234605	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181228918_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.8	chr2	-	5707	16	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_12	17.0286033876338	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7489	False	NA	-1	True	AATAAA	-26	NA	181234545	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229645_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231073_181231165_181231975_181232262_181232406_181232652_181232779_181234206
ES.21112.9	chr2	-	5437	17	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	-1	0	intron_retention	TRUE	canonical	3	4	junction_16	14.1706948929825	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7482	False	NA	-1	True	AATAAA	-26	NA	181234552	181223895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234446
ES.21113.1	chr2	-	180	1	Intergenic	novelGene_17520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGTG	6481	False	NA	NA	False	NA	NA	NA	181235553	181235373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181235400_181235600
ES.21114.1	chr2	-	3757	3	NIC	ENSMUSG00000038605.12	novel	2164	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	47	junction_1	6.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCAGTGTTGGGTCTCT	1042	False	NA	-2	True	AATAAA	-14	NA	181240992	181237010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181238399_181238539_181239137_181239220
ES.21114.2	chr2	-	2156	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	5	3	5	0	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	1034	False	NA	-5	True	AATAAA	-11	NA	181241000	181237013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
ES.21114.3	chr2	-	3773	2	ISM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	64	0	64	0	intron_retention	FALSE	canonical	3	47	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	1107	False	NA	-5	True	AATAAA	-11	NA	181240927	181237013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181238399_181238539
ES.21114.4	chr2	-	3478	4	ISM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	5	3	5	0	intron_retention	FALSE	canonical	3	47	junction_1	5.71547606649408	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	1034	False	NA	-5	True	AATAAA	-11	NA	181241000	181237013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220
ES.21114.5	chr2	-	2290	5	FSM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	-161	2	-147	-2	multi-exon	FALSE	canonical	3	8	junction_4	19.6850196850295	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTCAGTGTTGGG	882	False	NA	-7	True	AATAAA	-9	NA	181241152	181237015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239387_181240724
ES.21114.6	chr2	-	1788	3	NIC	ENSMUSG00000038605.12	novel	2164	5	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	22.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTCAGTGTTGGG	1046	False	NA	-7	True	AATAAA	-9	NA	181240988	181237015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181238399_181238539_181238681_181240724
ES.21115.1	chr2	+	3041	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	14	-1	14	1	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2508	False	NA	29	True	ATTAAA	-17	NA	181243125	181297454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.10	chr2	+	2920	21	NNC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_10	98.3167839181083	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGGGGCTTGGGCCT	2544	False	NA	26	True	ATTAAA	-14	NA	181243161	181297451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278767_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.13	chr2	+	2997	21	NNC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	101.287153677058	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGGGGCTTGGGCCT	2545	False	NA	26	True	ATTAAA	-14	NA	181243162	181297451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294346_181296636_181296756_181297214
ES.21115.16	chr2	+	3841	20	NIC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	12	-2	intron_retention	FALSE	canonical	3	340	junction_3	46.973558897076	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGGGGCTTGGGCCT	2560	False	NA	26	True	ATTAAA	-14	NA	181243177	181297451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.18	chr2	+	196	1	Intergenic	novelGene_17521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACATTTTAGCAGATGAA	5552	False	NA	NA	False	NA	NA	NA	181246169	181246365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181246200_181246400
ES.21115.19	chr2	+	221	1	Intergenic	novelGene_17522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAATAAAACATC	7232	False	NA	NA	False	NA	NA	NA	181247849	181248070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181247800_181248100
ES.21115.20	chr2	+	2673	19	ISM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	14656	1	14602	-1	3prime_fragment	FALSE	canonical	3	340	junction_1	49.918699334116	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGGGGCTTGGGCCTC	NA	False	NA	27	True	ATTAAA	-15	NA	181257767	181297452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.21	chr2	+	203	2	Intergenic	novelGene_17525	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	181262634	181308441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181262686_181308289
ES.21115.22	chr2	+	178	1	Intergenic	novelGene_17529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACAC	504	False	NA	NA	False	NA	NA	NA	181288295	181288473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181288300_181288500
ES.21115.23	chr2	+	909	4	FSM	ENSMUSG00000108976.2	ENSMUST00000207856.2	755	4	-8	-146	-8	146	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTCTTGTCTTTGCCTG	6075	False	NA	NA	False	AATAAA	-22	NA	181298818	181301406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181299016_181300412_181300689_181300785_181300939_181301123
ES.21115.24	chr2	+	217	1	Intergenic	novelGene_17531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGGGGGGGTGTTTGTTT	1481	False	NA	NA	False	TTTAAA	-9	NA	181308235	181308452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181308200_181308500
ES.21115.6	chr2	+	3122	21	NNC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	101.861805894064	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2538	False	NA	29	True	ATTAAA	-17	NA	181243155	181297454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181291050_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.7	chr2	+	3081	22	NNC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	129.817663861048	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGGGGCTTGGGCCT	2540	False	NA	26	True	ATTAAA	-14	NA	181243157	181297451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181285029_181285105_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21115.9	chr2	+	3000	21	NNC	ENSMUSG00000002455.15	novel	3054	21	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.735379785009	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	2543	False	NA	29	True	ATTAAA	-17	NA	181243160	181297454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263585_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ES.21116.1	chr2	-	225	1	Intergenic	novelGene_17523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGATGGTTCCAGAACA	NA	False	NA	NA	False	NA	NA	NA	181252024	181251799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181251800_181252000
ES.21117.1	chr2	-	1881	1	Intergenic	novelGene_17524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGCCAGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	181261124	181259243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181259200_181261100
ES.21118.1	chr2	-	197	1	Intergenic	novelGene_17526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCAAAGAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	181266799	181266602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181266600_181266800
ES.21119.1	chr2	-	168	1	Intergenic	novelGene_17527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	181267527	181267359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181267400_181267500
ES.2112.1	chr1	-	178	1	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAACTTACTATGA	NA	False	NA	NA	False	NA	NA	NA	182805760	182805582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_182805600_182805800
ES.21120.1	chr2	-	160	1	Intergenic	novelGene_17528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	8780	False	NA	NA	False	NA	NA	NA	181279248	181279088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181279100_181279200
ES.21121.1	chr2	-	170	1	Intergenic	novelGene_17530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGATTAATAGT	6492	False	NA	NA	False	NA	NA	NA	181307821	181307651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181307700_181307800
ES.21122.1	chr2	-	1455	2	FSM	ENSMUSG00000046470.6	ENSMUST00000054491.6	1620	2	156	9	156	-9	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTTTCAGTGATCAC	-1	True	NA	NA	False	ATTAAA	-12	NA	181313277	181311637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181312790_181312974
ES.21123.1	chr2	+	1186	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	-15	12	-15	-3	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACAGGCTTCAGCTGGG	2277	False	NA	10	True	ATTAAA	-24	NA	181322087	181329852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.10	chr2	+	3912	6	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	41	4	intron_retention	FALSE	canonical	1	2	junction_1	17.1510932596147	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCAGCTGGGTCCTGTC	2333	False	NA	17	True	ATTAAA	-31	NA	181322143	181329859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181322529_181325005_181325069_181325340_181325447_181326235_181328546_181328620_181329479_181329669
ES.21123.11	chr2	+	1878	10	NNC	ENSMUSG00000059540.16	novel	1045	10	NA	NA	51	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	16.6740724287147	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACACAGGCTTCAGCTG	2343	False	NA	8	True	ATTAAA	-22	NA	181322153	181329850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181323031_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328038_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.2	chr2	+	1440	10	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	13.0469238605206	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAACACAGGCTTCAGCT	2280	False	NA	7	True	ATTAAA	-21	NA	181322090	181329849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181322529_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.3	chr2	+	1525	9	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	30	junction_1	5.86834729715275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACAGGCTTCAGCTGG	2288	False	NA	9	True	ATTAAA	-23	NA	181322098	181329851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.4	chr2	+	4264	8	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	1	3	intron_retention	FALSE	canonical	3	37	junction_3	4.88228785446716	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCAGCTGGGTCCTGT	2293	False	NA	16	True	ATTAAA	-30	NA	181322103	181329858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.5	chr2	+	3899	9	NIC	ENSMUSG00000059540.16	novel	1045	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_5	5.66651347832157	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGCTAAACACAGGCTT	2293	False	NA	2	True	ATTAAA	-16	NA	181322103	181329844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.6	chr2	+	5784	6	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	37	junction_5	5.40370243444252	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTTCAGCTGGGTCC	2295	False	NA	13	True	ATTAAA	-27	NA	181322105	181329855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181325069_181325340_181325447_181326235_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.7	chr2	+	1774	9	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	5	5	intron_retention	FALSE	canonical	1	2	junction_1	13.7272539132923	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAACACAGGCTTCAGCT	2297	False	NA	7	True	ATTAAA	-21	NA	181322107	181329849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181322529_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
ES.21123.8	chr2	+	5779	5	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	38	junction_4	5.44862367942584	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTTCAGCTGGGTCC	2299	False	NA	13	True	ATTAAA	-27	NA	181322109	181329855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181325069_181325340_181325447_181326235_181327716_181327982_181328768_181329406
ES.21123.9	chr2	+	6340	5	NIC	ENSMUSG00000059540.16	novel	1183	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	40	junction_2	4.74341649025257	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTTCAGCTGGGTCC	2302	False	NA	13	True	ATTAAA	-27	NA	181322112	181329855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181325069_181325340_181325447_181326235_181327716_181327982_181328546_181328620
ES.21124.1	chr2	-	2418	1	Antisense	novelGene_ENSMUSG00000059540.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCCGCCCCCGGGACC	NA	False	NA	NA	False	NA	NA	NA	181324480	181322062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr2_-_181322100_181324500
ES.21125.1	chr2	-	1478	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	35	-2	5	-1	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTCTTTCAAGTTGC	NA	False	NA	-13	True	AATAAA	-16	NA	181335735	181330212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ES.21125.10	chr2	-	1061	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	49	401	2	195	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCCTTACTGTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	181335721	181330615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ES.21125.2	chr2	-	886	6	NIC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	48.4090900554844	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335723	181330215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181330512_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ES.21125.3	chr2	-	773	5	NNC	ENSMUSG00000002458.14	novel	1460	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.6849318534044	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335723	181330215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181330512_181331169_181331405_181331494_181331570_181333025_181333141_181335671
ES.21125.4	chr2	-	1765	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	53.2315695804661	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335705	181330215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335351
ES.21125.5	chr2	-	1406	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108772.8	779	5	-32	-595	-2	-1	multi-exon	FALSE	canonical	3	30	junction_4	46.2729672703189	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTGTTCTTTCAAGT	NA	False	NA	-16	True	AATAAA	-13	NA	181335772	181330215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181335671
ES.21125.6	chr2	-	1535	6	NNC	ENSMUSG00000002458.14	novel	1511	6	NA	NA	288	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.6261130420619	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTTGTTCTTTCAAG	NA	False	NA	-17	True	AATAAA	-12	NA	181335136	181330216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335011
ES.21125.7	chr2	-	1437	4	NIC	ENSMUSG00000002458.14	novel	1460	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	30	junction_3	52.8036194045657	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTTGTTCTTTCAAG	NA	False	NA	-17	True	AATAAA	-12	NA	181335723	181330216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_-_181331405_181331494_181331570_181333025_181333148_181335671
ES.21125.8	chr2	-	1948	6	FSM	ENSMUSG00000002458.14	ENSMUST00000108776.8	1216	6	-90	-642	7	-2	multi-exon	FALSE	canonical	2	7	junction_5	50.8660987299006	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTTGTTCTTTCAAG	NA	False	NA	-17	True	AATAAA	-12	NA	181335693	181330216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335155
ES.21125.9	chr2	-	3881	3	ISM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	1	-4	1	1	intron_retention	FALSE	canonical	3	141	junction_1	1	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTTGTTATGGTCTTT	NA	False	NA	1	True	AGTAAA	-14	NA	181335722	181330295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_-_181331405_181331494_181331570_181333025
ES.21126.1	chr2	+	209	1	Intergenic	novelGene_17532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGTAGTTGGGTAGCAG	NA	False	NA	NA	False	NA	NA	NA	181341756	181341965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181341800_181342000
ES.21127.1	chr2	+	178	1	Intergenic	novelGene_17533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	181346439	181346617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_+_181346400_181346600
ES.21128.1	chr2	-	148	1	Intergenic	novelGene_17534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181346788	181346640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181346600_181346800
ES.21129.1	chr2	+	2945	4	NIC	ENSMUSG00000027584.18	novel	2971	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCCTGTAGAATAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	181356836	181362767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181357023_181357482_181357725_181360169_181360526_181360606
ES.2113.1	chr1	+	156	1	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATAAATAAAAAAA	744	False	NA	NA	False	NA	NA	NA	182955543	182955699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_182955500_182955700
ES.21130.1	chr2	+	3566	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	2	1	2	-1	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCTGTGTTGAGTAT	NA	False	NA	25	True	AATAAA	-28	NA	181479648	181499253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ES.21130.10	chr2	+	3574	7	NNC	ENSMUSG00000027589.15	novel	3499	7	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	34.7343090074097	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTATTCTCAGTATTG	NA	False	NA	9	True	AATAAA	-12	NA	181479693	181499237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493374_181493503_181496665
ES.21130.11	chr2	+	3400	6	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-8	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	37.6329642733601	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCAGTATTGCTTCTG	NA	False	NA	15	True	AATAAA	-18	NA	181479697	181499243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181493378_181493503_181496665
ES.21130.14	chr2	+	8466	1	NIC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-1977	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTCTCAGTATTGCT	NA	False	NA	11	True	AATAAA	-14	NA	181490773	181499239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr2_+_181490800_181499200
ES.21130.2	chr2	+	6776	6	ISM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	7	14	7	1	intron_retention	FALSE	canonical	3	59	junction_5	9.64157663455516	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTCTCAGTATTGCTT	NA	False	NA	12	True	AATAAA	-15	NA	181479653	181499240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378
ES.21130.3	chr2	+	2638	8	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	24	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	30.3442829904429	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCAGTATTGCTTCTG	NA	False	NA	15	True	AATAAA	-18	NA	181479670	181499243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181497094_181497152_181497683
ES.21130.4	chr2	+	2926	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	34	609	-25	-594	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGGTGGATTGATTGA	NA	False	NA	NA	False	AATAAA	-20	NA	181479680	181498645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ES.21130.5	chr2	+	3543	7	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	27.6028380183391	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCAGTATTGCTTCTG	NA	False	NA	15	True	AATAAA	-18	NA	181479680	181499243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496711
ES.21130.6	chr2	+	3283	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	34	252	-25	-237	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGTCTTCAGGATC	NA	False	NA	NA	False	AATAAA	-14	NA	181479680	181499002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ES.21130.7	chr2	+	3632	8	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3866243399215	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTCTCAGTATTGCT	NA	False	NA	11	True	AATAAA	-14	NA	181479688	181499239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181480207_181480328_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ES.21130.9	chr2	+	3276	8	NNC	ENSMUSG00000027589.15	novel	3569	7	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.009417446732	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCAGTATTGCTTCTGT	NA	False	NA	16	True	AATAAA	-19	NA	181479692	181499244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730_181496858_181497094
ES.21131.1	chr2	-	3520	1	Intergenic	novelGene_17535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAATTTTTTGAGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	181506021	181502501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181502500_181506000
ES.21131.2	chr2	-	3341	1	Intergenic	novelGene_17536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTATATCTTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	181506019	181502678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181502700_181506000
ES.21131.3	chr2	-	3262	2	Intergenic	novelGene_17537	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTATATCTTGTGACTTT	NA	False	NA	NA	False	NA	NA	NA	181506040	181502678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181503903_181504002
ES.21131.4	chr2	-	2918	1	Intergenic	novelGene_17538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	181506016	181503098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181503100_181506000
ES.21132.1	chr2	+	2265	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	660	0	-660	multi-exon	FALSE	canonical	3	712	junction_2	38.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTTTGATTTTACTGT	8919	False	NA	NA	False	NA	NA	NA	181506152	181511963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.2	chr2	+	1744	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	23	1181	0	-1181	multi-exon	FALSE	canonical	3	712	junction_2	38.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCCTCAGTTCTT	8919	False	NA	3	True	ATTAAA	-16	NA	181506152	181511442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.3	chr2	+	697	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	29	2222	6	-2222	multi-exon	FALSE	canonical	3	712	junction_2	38.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGTTTTCTCTGTGT	8925	False	NA	15	True	AATAAA	-26	NA	181506158	181510401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.4	chr2	+	1913	4	NNC	ENSMUSG00000038628.9	novel	2948	3	NA	NA	36	4661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	355.182894983541	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATCTTTAA	8955	False	NA	NA	False	NA	NA	NA	181506188	181517284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr2_+_181506363_181507738_181507827_181509996_181510159_181515795
ES.21132.5	chr2	+	1224	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	65	1659	42	-1659	multi-exon	FALSE	canonical	3	712	junction_2	38.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGGCTATGTGAAGAAT	8961	False	NA	NA	False	AATAAA	-17	NA	181506194	181510964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.6	chr2	+	1066	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	68	1814	45	-1814	multi-exon	FALSE	canonical	3	712	junction_2	38.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTTCTGGATGATTTT	8964	False	NA	NA	False	ACTAAA	-19	NA	181506197	181510809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.7	chr2	+	1541	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	90	1317	67	-1317	multi-exon	FALSE	canonical	3	712	junction_2	38.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGATCTCTGGTTG	8986	False	NA	NA	False	CATAAA	-16	NA	181506219	181511306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21132.8	chr2	+	480	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	90	2378	67	2243	multi-exon	FALSE	canonical	3	712	junction_2	38.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGATAAAGTCCTTGATG	8986	False	NA	NA	False	AATATA	-16	NA	181506219	181510245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr2_+_181506363_181507738_181507827_181509996
ES.21133.1	chr2	-	160	1	Intergenic	novelGene_17539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTATT	NA	False	NA	NA	False	NA	NA	NA	181530910	181530750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181530800_181530900
ES.21134.1	chr2	-	180	2	Intergenic	novelGene_17540	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTTAGACTCGGGAGC	NA	False	NA	NA	False	NA	NA	NA	181599769	181571817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181571825_181599596
ES.21134.2	chr2	-	8596	4	Intergenic	novelGene_17541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTGTCATGTTATT	4273	False	NA	-3	True	NA	NA	NA	181595000	181581637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181589970_181591081_181591143_181591321_181591403_181594878
ES.21134.3	chr2	-	3232	4	Intergenic	novelGene_17542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	7.31816613336672	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAATTATTTTATTTA	4280	False	NA	NA	False	NA	NA	NA	181594993	181588228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181589970_181591081_181591143_181591321_181592637_181594878
ES.21134.4	chr2	-	1977	4	Intergenic	novelGene_17543	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGTAATCAATGCATA	4272	False	NA	NA	False	NA	NA	NA	181595001	181588257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181589970_181591081_181591143_181591321_181591403_181594878
ES.21134.5	chr2	-	214	1	Intergenic	novelGene_17544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTAAAAAAAAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	181599770	181599556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr2_-_181599600_181599800
ES.21135.1	chr3	-	175	1	Intergenic	novelGene_17545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	3102116	3101941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_3101900_3102100
ES.21136.1	chr3	-	168	1	Intergenic	novelGene_17546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAGACAGGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	3370818	3370650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_3370600_3370800
ES.21137.1	chr3	-	1907	3	Intergenic	novelGene_17547	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	4227999	4221025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_4221319_4222006_4223347_4227725
ES.21138.1	chr3	-	7085	1	Intergenic	novelGene_17548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTTGTTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	4790507	4783422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_4783400_4790500
ES.21139.1	chr3	-	175	1	Intergenic	novelGene_17549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATATATATATATTT	NA	False	NA	NA	False	NA	NA	NA	5426648	5426473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_5426500_5426600
ES.2114.1	chr1	+	172	1	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAATTAGTAAT	NA	False	NA	NA	False	NA	NA	NA	183000209	183000381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183000200_183000400
ES.21140.1	chr3	+	177	1	Intergenic	novelGene_17550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAGAAATATC	NA	False	NA	NA	False	NA	NA	NA	5447982	5448159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_5448000_5448200
ES.21141.1	chr3	-	5670	4	NIC	ENSMUSG00000040374.14	novel	2051	5	NA	NA	-1	3783	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	25.9786236911983	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCACAACATGCAGAAACT	NA	False	NA	NA	False	NA	NA	NA	5641189	5621464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641097
ES.21141.10	chr3	-	1976	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	-197	-2	-86	-2	multi-exon	FALSE	canonical	1	3	junction_4	21.3672646822189	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTGTGCATTTATTT	NA	False	NA	-2	True	AATAAA	-18	NA	5641385	5625561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ES.21141.12	chr3	-	1652	5	NNC	ENSMUSG00000040374.14	novel	1749	5	NA	NA	-3180	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.3116752039815	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGGGATGATTGTG	NA	False	NA	-11	True	AATAAA	-9	NA	5644479	5625570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5644363
ES.21141.13	chr3	-	3571	1	NIC	ENSMUSG00000040374.14	novel	2038	6	NA	NA	2	-12069	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGGTTAAGTAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	5641203	5637632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_5637600_5641200
ES.21141.2	chr3	-	1596	4	NNC	ENSMUSG00000040374.14	novel	1749	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7872274704859	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641206	5625559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_5626825_5628224_5628333_5628679_5628790_5641093
ES.21141.3	chr3	-	2105	1	NIC	ENSMUSG00000040374.14	novel	2038	6	NA	NA	1125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5627664	5625559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_5625600_5627700
ES.21141.4	chr3	-	2042	5	NNC	ENSMUSG00000040374.14	novel	1749	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	20.5715215771707	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641203	5625559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5640708
ES.21141.5	chr3	-	2246	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	-498	1	-498	-1	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641797	5625560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
ES.21141.8	chr3	-	1767	6	NNC	ENSMUSG00000040374.14	novel	1777	6	NA	NA	-395	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.262075374951	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641694	5625560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641616
ES.21141.9	chr3	-	1603	5	NNC	ENSMUSG00000040374.14	novel	1749	5	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.1097590589794	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGCATTTATTTT	NA	False	NA	-1	True	AATAAA	-19	NA	5641179	5625560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_5626825_5627728_5627768_5628224_5628333_5628679_5628790_5641097
ES.21142.1	chr3	+	154	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	320	16	320	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCATAAAAAAAAAATGGG	NA	False	NA	NA	False	AATAAA	-17	NA	5816185	5816339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_5816200_5816300
ES.21143.1	chr3	+	179	1	Intergenic	novelGene_17551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	6048484	6048663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_6048500_6048700
ES.21144.1	chr3	+	3077	2	Intergenic	novelGene_17552	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGTATATTTT	NA	False	NA	NA	False	AAAAAG	-3	NA	6203574	6208345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_6203696_6205389
ES.21145.1	chr3	-	180	1	Intergenic	novelGene_17553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	6641473	6641293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_6641300_6641500
ES.21146.1	chr3	+	3654	3	FSM	ENSMUSG00000027499.13	ENSMUST00000028999.12	3617	3	-37	0	-36	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCTCTCAAGAGTCAT	2637	False	NA	21	True	ATTAAA	-22	NA	7431692	7510426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_7431813_7502397_7502576_7507070
ES.21147.1	chr3	+	3270	8	NIC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	-73	5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	66.9154202660923	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTTCTTGGATATT	NA	False	NA	15	True	NA	NA	NA	7568469	7618901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7604135_7604244_7616442
ES.21147.10	chr3	+	5396	2	ISM	ENSMUSG00000043542.13	ENSMUST00000193010.2	1420	8	20058	21135	-15316	-20561	intron_retention	FALSE	canonical	3	177	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCATCAAAACAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	7588603	7596000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_7589328_7591328
ES.21147.11	chr3	+	1141	1	Intergenic	novelGene_17554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATCCAAGGACAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	7608412	7609553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_7608400_7609600
ES.21147.2	chr3	+	3359	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-70	3	-70	-3	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTCTTTTTTTTCT	NA	False	NA	7	True	NA	NA	NA	7568472	7618893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ES.21147.4	chr3	+	1255	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-44	2081	-44	254	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGTGTCATTCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7568498	7616815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ES.21147.5	chr3	+	2455	8	NNC	ENSMUSG00000043542.13	novel	1420	8	NA	NA	-39	-19938	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	71.9004413713	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTAGTGTTTTTATG	NA	False	NA	NA	False	AAAAAG	-12	NA	7568503	7596623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7594937
ES.21147.6	chr3	+	3144	9	NNC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	-36	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.1285549531179	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAAACTGCTGCTTG	NA	False	NA	-73	True	AATAAA	-6	NA	7568506	7618813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_7568588_7581515_7581565_7583496_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ES.21147.7	chr3	+	3405	10	NNC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	-28	-32	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	79.2282216833819	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATATAAATAAAA	NA	False	NA	-22	True	CATAAA	-42	NA	7568514	7618864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7600980_7601098_7604135_7604244_7616442
ES.21147.8	chr3	+	1902	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	-21	1411	-21	350	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGATTTTTTTGTAGTA	NA	False	NA	NA	False	ATTAAA	-19	NA	7568521	7617485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ES.21148.1	chr3	+	838	1	Antisense	novelGene_ENSMUSG00000040329.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7678004	7678842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_7678000_7678800
ES.21149.1	chr3	-	3608	1	Intergenic	novelGene_17555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTCTTCAAGCCTATAT	NA	False	NA	NA	False	AATAAA	-25	NA	8087895	8084287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_8084300_8087900
ES.21149.2	chr3	-	1313	2	Intergenic	novelGene_17556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCGGTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	8087895	8084714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_8085827_8087694
ES.21149.3	chr3	-	3187	1	Intergenic	novelGene_17557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCGGTGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	8087901	8084714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_8084700_8087900
ES.2115.1	chr1	-	5046	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-61	-1	-24	1	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTCCGTCGTTCTT	NA	False	NA	3	True	AATAAA	-35	NA	183003110	182867828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ES.2115.10	chr1	-	4921	9	NNC	ENSMUSG00000030768.13	novel	4901	9	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.8230690505755	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACCTGTCTCCGTCG	NA	False	NA	-2	True	AATAAA	-30	NA	183003060	182867833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955206_183002886
ES.2115.12	chr1	-	4905	9	NNC	ENSMUSG00000030768.13	novel	4901	9	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.3812703770217	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACCTGTCTCCGT	NA	False	NA	-4	True	AATAAA	-28	NA	183003051	182867835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182871448_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
ES.2115.13	chr1	-	3488	9	NNC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	31.1678921327702	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCTGCCTTGCTG	NA	False	NA	0	True	AATAAA	-15	NA	183003066	182877754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182957227_182984515_182984604_183002886
ES.2115.14	chr1	-	1290	8	ISM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	57	9927	52	0	5prime_fragment	FALSE	canonical	3	12	junction_7	29.7170328400452	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGCCTCTGCCTTGC	NA	False	NA	-2	True	AATAAA	-13	NA	183002997	182877756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
ES.2115.15	chr1	-	1432	9	ISM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	-2	9927	-2	0	5prime_fragment	FALSE	canonical	3	56	junction_6	14.115040736746	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGCCTCTGCCTTGC	NA	False	NA	-2	True	AATAAA	-13	NA	183003051	182877756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ES.2115.16	chr1	-	5235	1	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	10	-80783	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTAGAAGCATCCTT	NA	False	NA	NA	False	NA	NA	NA	183003039	182997804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182997800_183003000
ES.2115.3	chr1	-	4929	9	FSM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	-28	0	4	0	multi-exon	FALSE	canonical	3	12	junction_8	30.8666486681013	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003082	182867829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
ES.2115.4	chr1	-	5008	10	NNC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	30.3168453357389	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003092	182867829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955078_182955188_182984515_182984604_183002886
ES.2115.5	chr1	-	4896	9	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	32.4169612240259	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	0	True	AATAAA	-32	NA	183003091	182867831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182984515_182984604_183002886
ES.2115.6	chr1	-	4955	10	NNC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	31.3136265845485	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	0	True	AATAAA	-32	NA	183003068	182867831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955105_182955188_182984515_182984604_183002886
ES.2115.7	chr1	-	4838	8	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.9212297455905	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	0	True	AATAAA	-32	NA	183003059	182867831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ES.2115.8	chr1	-	4463	9	NIC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.1886181544216	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTCTCCGTCGTT	NA	False	NA	0	True	AATAAA	-32	NA	183003052	182867831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182955059_182955188_182984515_182984604_183002886
ES.2115.9	chr1	-	5094	11	NNC	ENSMUSG00000030768.13	novel	4984	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.451200254587	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACCTGTCTCCGTCGT	NA	False	NA	-1	True	AATAAA	-31	NA	183003051	182867832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182907772_182907884_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ES.21150.1	chr3	+	1111	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	-48	1010	-48	-979	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATGATCTTACATGTC	NA	False	NA	116	True	AATACA	-21	NA	8574371	8625656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ES.21150.11	chr3	+	3147	1	Genic_Genomic	ENSMUSG00000027500.11	novel	NA	NA	NA	NA	-513	1293	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGGAGGGGAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	8624812	8627959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_8624800_8628000
ES.21150.2	chr3	+	2097	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	-26	2	-26	-2	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGGTTTGGTCTGGTC	NA	False	NA	21	True	AATAAA	-21	NA	8574393	8626664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ES.21150.3	chr3	+	835	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	125	1113	-30	-1082	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCAGAATGTTTTGCTT	NA	False	NA	13	True	NA	NA	NA	8574544	8625553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ES.21150.4	chr3	+	1572	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	171	330	16	-299	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACAAACAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	8574590	8626336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ES.21150.5	chr3	+	3430	3	FSM	ENSMUSG00000027500.11	ENSMUST00000191847.2	3413	3	16	-33	16	33	multi-exon	FALSE	canonical	3	1699	junction_2	112	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8574590	8613866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_8574691_8606900_8606997_8610632
ES.21150.7	chr3	+	888	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACGGTTTGGTCTGGTC	NA	False	NA	21	True	AATAAA	-21	NA	8574600	8626664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
ES.21150.8	chr3	+	4817	1	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	-16276	33	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8609049	8613866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_8609000_8613900
ES.21150.9	chr3	+	667	4	NNC	ENSMUSG00000027500.11	novel	308	2	NA	NA	-15193	-1134	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	868.993415139353	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAAAACAG	NA	False	NA	-39	True	AAAAAG	-12	NA	8610132	8625501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_8610259_8610632_8610806_8619851_8620044_8625325
ES.21151.1	chr3	-	2324	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	75	24	75	-24	multi-exon	FALSE	canonical	3	9	junction_1	1.11803398874989	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGCAAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	8732241	8728442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
ES.21152.1	chr3	+	4477	1	Antisense	novelGene_ENSMUSG00000027506.16_AS_novelGene_ENSMUSG00000040269.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGGCCCTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	8988619	8993096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_8988600_8993100
ES.21153.1	chr3	+	2770	2	Antisense	novelGene_ENSMUSG00000027506.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	9000094	9003044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_9002436_9002615
ES.21154.1	chr3	+	506	1	Intergenic	novelGene_17559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	9025321	9025827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9025300_9025800
ES.21155.1	chr3	+	5687	1	Antisense	novelGene_ENSMUSG00000027506.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	9050844	9056531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_9050800_9056500
ES.21156.1	chr3	+	2773	1	Intergenic	novelGene_17561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAAGGAGAGGATGAG	NA	False	NA	NA	False	NA	NA	NA	9063711	9066484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9063700_9066500
ES.21156.2	chr3	+	1600	1	Intergenic	novelGene_17560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	9063711	9065311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9063700_9065300
ES.21157.1	chr3	-	715	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	69	-1	69	1	multi-exon	FALSE	canonical	3	890	junction_1	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCGTGGTTCTTTTG	NA	False	NA	0	True	NA	NA	NA	8988909	8867204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8867475_8965045_8965228_8988646
ES.21157.10	chr3	-	3381	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-71	3007	-71	26	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAAAGGGTGAGTCAT	NA	False	NA	NA	False	AATAAA	-43	NA	9069854	8993659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.11	chr3	-	3159	7	NNC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1289.15175600082	1322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTTCTTTTTTATGTA	NA	False	NA	NA	False	AATAAA	-15	NA	9069503	8993687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9058800_9058958_9069464
ES.21157.12	chr3	-	3198	6	FSM	ENSMUSG00000027506.16	ENSMUST00000091354.12	2193	6	-36	-969	-34	-3	multi-exon	FALSE	canonical	0	0	junction_1	1287.01132862147	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGTTCTTTTTTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	9029142	8993688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9028906
ES.21157.13	chr3	-	2936	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	212	3169	-33	-136	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGGATTTCAGCCACTA	NA	False	NA	NA	False	AATAAA	-16	NA	9069571	8993821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.14	chr3	-	2636	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-12	3693	-12	312	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAGAGATTTCATATGA	NA	False	NA	NA	False	AAGAAA	-12	NA	9069795	8994345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.15	chr3	-	3032	7	NNC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	-1481	166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1236.9164280581	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTTTATTTTTCTTCT	NA	False	NA	-1	True	AATATA	-19	NA	9071264	8994491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464_9069679_9070605
ES.21157.16	chr3	-	5962	1	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	26858	164	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	4310	False	NA	-3	True	AATATA	-17	NA	9000455	8994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8994500_9000500
ES.21157.17	chr3	-	6192	6	NIC	ENSMUSG00000027506.16	novel	673	7	NA	NA	3	164	intron_retention	FALSE	canonical	3	11	junction_5	1277.95211177884	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069535	8994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068495_9069464
ES.21157.18	chr3	-	6355	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-62	164	intron_retention	FALSE	canonical	3	1409	junction_1	611.345391329648	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069845	8994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.19	chr3	-	3605	6	ISM	ENSMUSG00000027506.16	ENSMUST00000134788.8	673	7	-257	-1705	-12	164	intron_retention	FALSE	canonical	0	0	junction_1	1280.41733821438	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069795	8994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347
ES.21157.2	chr3	-	508	2	NIC	ENSMUSG00000040269.6	novel	783	3	NA	NA	92	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	8988886	8867206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8867475_8988646
ES.21157.20	chr3	-	5295	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-51	164	intron_retention	FALSE	canonical	0	0	junction_1	1158.84015291152	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069834	8994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8996235_9000051_9000101_9009670_9012690_9018743_9018860_9069464
ES.21157.22	chr3	-	2430	6	NNC	ENSMUSG00000027506.16	novel	2193	6	NA	NA	-58	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1289.00473234197	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9029166	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9028891
ES.21157.25	chr3	-	2224	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	2	162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069536	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996225_9000044_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.26	chr3	-	2639	7	NNC	ENSMUSG00000027506.16	novel	673	7	NA	NA	-54	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1283.96721358279	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069837	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068459_9069464
ES.21157.29	chr3	-	2325	7	FSM	ENSMUSG00000027506.16	ENSMUST00000134788.8	673	7	51	-1703	10	162	multi-exon	FALSE	canonical	0	0	junction_1	1284.12148957955	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069487	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068495_9069464
ES.21157.3	chr3	-	943	7	Fusion	ENSMUSG00000040269.6_ENSMUSG00000027506.16	novel	561	4	NA	NA	-3	-1	multi-exon	FALSE	canonical	0	0	junction_2	1079.42630081395	1417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTGCCGTGGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	9069541	8867206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_8867475_8965045_8965228_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.30	chr3	-	2724	7	NNC	ENSMUSG00000027506.16	novel	673	7	NA	NA	210	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1285.35892090714	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069287	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068459_9068829
ES.21157.31	chr3	-	2221	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	1	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069537	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996228_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.33	chr3	-	2344	5	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	96	162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1201.94477826562	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTTTTTATTTTTC	NA	False	NA	-5	True	AATATA	-15	NA	9069687	8994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996250_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.34	chr3	-	2272	7	FSM	ENSMUSG00000027506.16	ENSMUST00000063496.14	697	7	-56	-1519	-17	161	multi-exon	FALSE	canonical	0	0	junction_1	1367.6783247533	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGTCTTTTTATTTTT	NA	False	NA	-6	True	AATATA	-14	NA	9069555	8994496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9008610_9008638_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.35	chr3	-	2529	7	NNC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	-12	161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1376.49082815688	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGTCTTTTTATTTTT	NA	False	NA	-6	True	AATATA	-14	NA	9069795	8994496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996225_9000039_9000101_9001498_9001541_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.38	chr3	-	5100	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-17	3	intron_retention	FALSE	canonical	0	0	junction_1	1158.84015291152	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTTTCAATATTTATTA	NA	False	NA	-25	True	AATAAA	-18	NA	9069800	8994654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8996235_9000051_9000101_9009670_9012690_9018743_9018860_9069464
ES.21157.39	chr3	-	2368	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-53	4002	-53	3	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTTTCAATATTTATTA	NA	False	NA	-25	True	AATAAA	-18	NA	9069836	8994654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.4	chr3	-	1168	7	Fusion	ENSMUSG00000040269.6_ENSMUSG00000027506.16	novel	3081	7	NA	NA	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	1236.9164280581	1417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCCTGCCGTGGTTCT	NA	False	NA	-4	True	NA	NA	NA	9069794	8867208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_8867475_8996078_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.40	chr3	-	6184	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-54	1	intron_retention	FALSE	canonical	3	1409	junction_1	611.345391329648	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	False	NA	-27	True	AATAAA	-16	NA	9069837	8994656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.42	chr3	-	3185	6	ISM	ENSMUSG00000027506.16	ENSMUST00000134788.8	673	7	0	-1542	0	1	intron_retention	FALSE	canonical	0	0	junction_1	1280.41733821438	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	False	NA	-27	True	AATAAA	-16	NA	9069538	8994656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347
ES.21157.44	chr3	-	2318	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069792	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996228_9000047_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.45	chr3	-	2314	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1246.04934091712	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069795	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009763_9012540_9012690_9018743_9018860_9069464
ES.21157.47	chr3	-	2068	6	NNC	ENSMUSG00000027506.16	novel	2193	6	NA	NA	593	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1287.89642440687	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9068904	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068829
ES.21157.48	chr3	-	4884	5	NNC	ENSMUSG00000027506.16	novel	2193	6	NA	NA	600	0	intron_retention	FALSE	canonical	0	0	junction_1	1258.23335971512	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9068897	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9012690_9018743_9018860_9068774
ES.21157.49	chr3	-	2237	7	NNC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1289.15175600082	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069551	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9058800_9058958_9069464
ES.21157.5	chr3	-	726	5	Fusion	ENSMUSG00000040269.6_ENSMUSG00000027506.16	novel	561	4	NA	NA	-32	-16	multi-exon	FALSE	canonical	0	0	junction_1	1201.94477826562	1417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAATCCTGTTCTTCC	NA	False	NA	-17	True	NA	NA	NA	9069570	8867221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_8867475_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.50	chr3	-	1986	7	NNC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1236.9164280581	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069554	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8995839_8995935_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.53	chr3	-	2319	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069793	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996239_9000058_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.55	chr3	-	2122	7	FSM	ENSMUSG00000027506.16	ENSMUST00000063496.14	697	7	-67	-1358	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	1367.6783247533	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069566	8994657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9008610_9008638_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.57	chr3	-	2039	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	1200.66655966592	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATAGGTTTCAATATTT	NA	False	NA	-29	True	AATAAA	-14	NA	9069560	8994658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8996235_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.59	chr3	-	2017	6	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1105.06589848751	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATAGGTTTCAATATTT	NA	False	NA	-29	True	AATAAA	-14	NA	9069498	8994658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996222_9000047_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.6	chr3	-	5398	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-11	930	-11	-930	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTGTCATTTATCGG	NA	False	NA	NA	False	AATAAA	-20	NA	9069794	8991582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.60	chr3	-	2262	7	FSM	ENSMUSG00000027506.16	ENSMUST00000134788.8	673	7	-49	-1540	-49	-1	multi-exon	FALSE	canonical	0	0	junction_1	1284.12148957955	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATAGGTTTCAATATTT	NA	False	NA	-29	True	AATAAA	-14	NA	9069587	8994658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068495_9069464
ES.21157.62	chr3	-	2421	7	NNC	ENSMUSG00000027506.16	novel	673	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1283.96721358279	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTATAGGTTTCAATAT	NA	False	NA	-31	True	AATAAA	-12	NA	9069784	8994660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9068347_9068459_9069464
ES.21157.64	chr3	-	1599	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-10	4728	-10	467	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACATTGTGAGTTAAGT	NA	False	NA	NA	False	ATTAAA	-25	NA	9069793	8995380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.65	chr3	-	1304	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	177	4836	-68	359	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTAGCTACATCTATTT	NA	False	NA	NA	False	NA	NA	NA	9069606	8995488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.66	chr3	-	1336	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-43	5024	-43	171	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACCAGCTACATTTTT	NA	False	NA	-6	True	ATTAAA	-34	NA	9069826	8995676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.7	chr3	-	8985	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-31	-935	intron_retention	FALSE	canonical	3	1409	junction_1	611.345391329648	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTGTGCTGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	9069569	8991587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.72	chr3	-	3390	1	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	28240	164	mono-exon	FALSE	NA	NA	NA	NA	NA	1275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGAAACTACCAGCTA	5692	False	NA	-13	True	ATTAAA	-27	NA	8999073	8995683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8995700_8999100
ES.21157.73	chr3	-	3811	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	-10	156	intron_retention	FALSE	canonical	0	0	junction_1	1158.84015291152	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTTTCAAAGGAGAAACT	NA	False	NA	-21	True	ATTAAA	-19	NA	9069548	8995691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_8996235_9000051_9000101_9009670_9012690_9018743_9018860_9069464
ES.21157.75	chr3	-	1162	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-10	5165	-10	30	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTTTGATCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	9069793	8995817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.76	chr3	-	1380	5	ISM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-17	8771	-17	-3225	5prime_fragment	FALSE	canonical	3	1409	junction_1	611.345391329648	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCTCCTTTAGTCCCT	NA	False	NA	NA	False	TATAAA	-16	NA	9069800	8999423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.77	chr3	-	4137	1	Intergenic	novelGene_17558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGCTAGTGACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	9006578	9002441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_9002400_9006600
ES.21157.8	chr3	-	3480	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	229	2608	-16	425	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATCTCTCCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	9069554	8993260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21157.9	chr3	-	3566	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	-16	2767	-16	266	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATGCAAGTGTGTT	NA	False	NA	NA	False	TTTAAA	-21	NA	9069799	8993419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ES.21158.1	chr3	+	202	1	Intergenic	novelGene_17562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAATGGATGAATCTG	NA	False	NA	NA	False	NA	NA	NA	9110235	9110437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9110200_9110400
ES.21159.1	chr3	+	4356	1	Intergenic	novelGene_17563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	9118770	9123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9118800_9123100
ES.21159.2	chr3	+	3313	6	Fusion	ENSMUSG00000103011.2_ENSMUSG00000103116.2	novel	846	3	NA	NA	-7847	1229	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTCGTTTTTTTTTTCTC	NA	False	NA	NA	False	TATAAA	-18	NA	9119176	9139500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_9119587_9121680_9121771_9130184_9130392_9135661_9136032_9136491_9136887_9137659
ES.21159.3	chr3	+	2400	1	Genic_Genomic	ENSMUSG00000103116.2	novel	NA	NA	NA	NA	-1023	-7734	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9126000	9128400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_9126000_9128400
ES.2116.1	chr1	+	7715	1	Antisense	novelGene_ENSMUSG00000118599.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCACATGATCTGATT	NA	False	NA	NA	False	AATAAA	-14	NA	183046147	183053862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_183046100_183053900
ES.21160.1	chr3	-	139	1	Intergenic	novelGene_17564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	9123509	9123370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_9123400_9123500
ES.21161.1	chr3	+	190	1	Intergenic	novelGene_17565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	9214385	9214575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9214400_9214600
ES.21162.1	chr3	+	178	1	Intergenic	novelGene_17566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGGGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9229281	9229459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9229300_9229500
ES.21163.1	chr3	+	242	1	Intergenic	novelGene_17567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTCTTTTTCACACAT	NA	False	NA	NA	False	NA	NA	NA	9278177	9278419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9278200_9278400
ES.21164.1	chr3	+	5611	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-138	1941	-138	-1941	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTGTCCGTTGCCTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	9315523	9348452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.10	chr3	+	3558	5	NNC	ENSMUSG00000069114.9	novel	7414	6	NA	NA	14523	-1779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.0356915377524	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACACTTTACCAGAAAC	NA	False	NA	NA	False	ATTAAA	-12	NA	9330184	9348614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_9330481_9343313_9343413_9345015_9345193_9345350_9345528_9345805
ES.21164.11	chr3	+	5503	4	NIC	ENSMUSG00000069114.9	novel	7414	6	NA	NA	14523	0	intron_retention	FALSE	canonical	3	53	junction_3	7.1336448530109	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCTTTGTGAAT	NA	False	NA	NA	False	TATAAA	-16	NA	9330184	9350393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_9330481_9343313_9343413_9345015_9345524_9345793
ES.21164.12	chr3	+	3101	1	ISM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	30532	1099	30532	-1099	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGCACAGTAAGTACAC	NA	False	NA	NA	False	AATAAA	-27	NA	9346193	9349294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_9346200_9349300
ES.21164.3	chr3	+	7502	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-83	-5	-83	5	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTGTGAATTTTAT	NA	False	NA	NA	False	TATAAA	-21	NA	9315578	9350398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.5	chr3	+	4277	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-68	3205	-68	-3205	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCTTTTTGTTTCATA	NA	False	NA	9	True	ATTAAA	-17	NA	9315593	9347188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.6	chr3	+	5236	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-68	2246	-68	-2246	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATCACCTAAATC	NA	False	NA	NA	False	NA	NA	NA	9315593	9348147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.7	chr3	+	6046	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-63	1431	-63	-1431	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGGGAAGAACATACAC	NA	False	NA	NA	False	AATAAA	-26	NA	9315598	9348962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.8	chr3	+	5717	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-63	1760	-63	-1760	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGACAGATTTTTCT	NA	False	NA	NA	False	ATTAAA	-31	NA	9315598	9348633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ES.21164.9	chr3	+	5324	4	NIC	ENSMUSG00000069114.9	novel	7414	6	NA	NA	14445	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.9404127862612	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCTTTGTGAAT	NA	False	NA	NA	False	TATAAA	-16	NA	9330106	9350393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_9330481_9345015_9345193_9345350_9345524_9345793
ES.21165.1	chr3	+	2301	1	Intergenic	novelGene_17568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTAGGGAAACTCTCCT	NA	False	NA	NA	False	AGTAAA	-24	NA	9365409	9367710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9365400_9367700
ES.21166.1	chr3	+	157	1	Intergenic	novelGene_17569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	9398342	9398499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9398300_9398500
ES.21167.1	chr3	-	3214	2	Antisense	novelGene_ENSMUSG00002076460.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGCAAGTTGTGCAAC	NA	False	NA	NA	False	NA	NA	NA	9474499	9456045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_9459177_9474416
ES.21168.1	chr3	-	299	1	Antisense	novelGene_ENSMUSG00000097365.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGATGGCTTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	9477612	9477313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_9477300_9477600
ES.21169.1	chr3	+	3995	1	Intergenic	novelGene_17570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTGTCTCATGTGTTA	NA	False	NA	NA	False	CATAAA	-19	NA	9486646	9490641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9486600_9490600
ES.2117.1	chr1	-	159	1	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAAAAAATAAAT	3219	False	NA	NA	False	NA	NA	NA	183055420	183055261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_183055300_183055400
ES.21170.1	chr3	+	2607	1	Intergenic	novelGene_17571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCAAAAACTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	9598745	9601352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9598700_9601400
ES.21171.1	chr3	+	3120	1	Intergenic	novelGene_17572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	9603966	9607086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9604000_9607100
ES.21172.1	chr3	+	305	1	Intergenic	novelGene_17573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGAGCTATACAT	4113	False	NA	NA	False	NA	NA	NA	9662487	9662792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9662500_9662800
ES.21173.1	chr3	+	3267	1	Antisense	novelGene_ENSMUSG00000040209.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTGTTCATCATCTAT	NA	False	NA	17	True	NA	NA	NA	9673818	9677085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_9673800_9677100
ES.21174.1	chr3	-	13169	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	675	-10	675	10	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGCCATTCATTTAT	NA	False	NA	1	True	AATAAA	-25	NA	9674470	9492069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.10	chr3	-	6983	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	113	6738	113	4534	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACCAGTGTGTATTCA	NA	False	NA	NA	False	AATGAA	-16	NA	9675032	9498817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.11	chr3	-	6647	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	219	6968	219	4304	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCTTGGTTTTATAC	NA	False	NA	NA	False	NA	NA	NA	9674926	9499047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.12	chr3	-	6805	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-50	7079	-50	4193	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATGACACTTTTATAAT	NA	False	NA	NA	False	AATACA	-20	NA	9675195	9499158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.13	chr3	-	6946	10	NIC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	-39	4161	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	130.921897365859	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAATACACTGCTTA	NA	False	NA	NA	False	AATACA	-28	NA	9675184	9499190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9503959_9504844_9504943_9509218_9509403_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.14	chr3	-	6060	9	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-657	4147	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	98.20442645319	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATTTCCAAATGAAAG	NA	False	NA	NA	False	AATACA	-14	NA	9675802	9499204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9675635
ES.21174.15	chr3	-	6683	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-50	7201	-50	4071	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGTGTGTGTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	9675195	9499280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.16	chr3	-	5103	8	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	44807	7894	21	3378	3prime_fragment	FALSE	canonical	3	267	junction_2	34.8114454553941	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTTCCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	9630338	9499973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123
ES.21174.17	chr3	-	5748	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	4	8082	4	3190	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCGTGTCATTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	9675141	9500161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.18	chr3	-	4693	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-67	9208	-67	2064	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTTTTGTGTCTTCA	NA	False	NA	NA	False	AATGAA	-37	NA	9675212	9501287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.19	chr3	-	4149	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-37	9722	-37	1550	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCTTCTCTTGAAGAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	9675182	9501801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.2	chr3	-	12187	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-13	1660	-13	-1660	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGGGGTGCCTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	9675158	9493739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.20	chr3	-	3695	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-13	10152	-13	1120	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCTGATCTTTTCCTT	NA	False	NA	NA	False	TTTAAA	-44	NA	9675158	9502231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.21	chr3	-	3535	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-36	10335	-36	937	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGCTTTTTTACAGAG	NA	False	NA	NA	False	AATATA	-16	NA	9675181	9502414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.22	chr3	-	2789	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-198	11243	-198	29	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACCCCAAGTGGAACC	NA	False	NA	14	True	AAAAAG	-29	NA	9675343	9503322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.23	chr3	-	2877	11	NIC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	143.697459963633	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9675193	9503351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9503959_9504844_9504943_9508883_9508967_9509218_9509403_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.24	chr3	-	2988	12	NNC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	157.682807460405	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9675139	9503351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9508883_9508967_9509218_9509403_9511019_9511125_9512334_9512603_9512816_9512982_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.25	chr3	-	2632	9	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	102.873025497455	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9675335	9503351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536059_9539558_9539663_9630123_9630360_9674329
ES.21174.26	chr3	-	2212	8	NIC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	108	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	110.981153023973	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9675037	9503357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9674329
ES.21174.27	chr3	-	2772	10	NIC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	-32	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	130.921897365859	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9675177	9503357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9503959_9504844_9504943_9509218_9509403_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.28	chr3	-	2789	10	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-68	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	131.323556695704	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9675213	9503357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9512816_9512982_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.3	chr3	-	4827	1	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	175907	2332	6858	-2332	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGTATACCCTAGTATA	NA	False	NA	NA	False	AATAAA	-15	NA	9499238	9494411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9494400_9499200
ES.21174.30	chr3	-	2468	10	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-37	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	100.931219704862	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9675182	9503357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329_9674964_9675088
ES.21174.31	chr3	-	1833	9	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	939	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	100.704316565875	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGTTTTTCTATGT	NA	False	NA	-21	True	NA	NA	NA	9674206	9503357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674113
ES.21174.33	chr3	-	1862	10	NNC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	-1179	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	124.348772748068	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAGAGTTTTTCTAT	NA	False	NA	-23	True	NA	NA	NA	9676324	9503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9675635_9675711_9676275
ES.21174.34	chr3	-	2557	10	NIC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	20	-68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	131.125705402427	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGGCATCTCTCTGTTT	NA	False	NA	-8	True	TATAAA	-19	NA	9675125	9503419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9503959_9504844_9504943_9508883_9508967_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.36	chr3	-	2276	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-85	11643	-85	33	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGCAAAAAATCAGCACT	NA	False	NA	NA	False	ATTAAA	-31	NA	9675230	9503722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.37	chr3	-	4629	7	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	7	-9562	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	149.225779720976	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACCCATAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	9675138	9513317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9516123_9516803_9517121_9517293_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.38	chr3	-	4786	6	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-152	-9562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.822689691619	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACCCATAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	9675297	9513317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9516438_9517293_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.39	chr3	-	4409	7	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	223	-9566	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	149.225779720976	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAATAAACCCATAAAAA	NA	False	NA	NA	False	NA	NA	NA	9674922	9513321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9516123_9516225_9516543_9517293_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.4	chr3	-	8885	5	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	157801	3486	-11248	-3486	3prime_fragment	FALSE	canonical	3	267	junction_2	36.4314424638937	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAACTGTTGGGGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	9517344	9495565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323
ES.21174.40	chr3	-	5053	5	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-34	-18341	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	141.108778961481	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACTTACAAATAAC	NA	False	NA	NA	False	AATAAA	-27	NA	9675179	9522096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9525733_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.41	chr3	-	1680	4	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-26	43601	-26	-31925	5prime_fragment	FALSE	canonical	3	284	junction_2	28.0832096931007	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTAGCCCAAAAGGGT	NA	False	NA	NA	False	AATATA	-21	NA	9675171	9535680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.42	chr3	-	4952	3	NIC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-68	-32075	intron_retention	FALSE	canonical	3	284	junction_1	26	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCATGTCTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	9675213	9535830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9539663_9630123_9630360_9674329
ES.21174.43	chr3	-	6573	2	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-171	132694	-171	-121018	5prime_fragment	FALSE	canonical	3	336	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAGACTATAGACAGGA	NA	False	NA	NA	False	NA	NA	NA	9675316	9624773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9630360_9674329
ES.21174.44	chr3	-	5730	2	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	888	-121018	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAGACTATAGACAGGA	NA	False	NA	NA	False	NA	NA	NA	9674257	9624773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9630360_9674113
ES.21174.45	chr3	-	5710	3	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-1179	-121018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAGACTATAGACAGGA	NA	False	NA	NA	False	NA	NA	NA	9676324	9624773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9630360_9675635_9675711_9676275
ES.21174.5	chr3	-	10320	4	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	161087	3486	-7962	-3486	3prime_fragment	FALSE	canonical	3	267	junction_2	40.9416929574514	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAACTGTTGGGGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	9514058	9495565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334
ES.21174.6	chr3	-	6015	1	ISM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	172051	5000	3002	-5000	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGATCTGGTAAGGCCC	NA	False	NA	NA	False	TATAAA	-17	NA	9503094	9497079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_9497100_9503100
ES.21174.7	chr3	-	7474	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	-60	6420	-60	4852	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCGTTTGACTTTTGTT	NA	False	NA	43	True	NA	NA	NA	9675205	9498499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21174.9	chr3	-	7239	10	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	25	4537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	131.323556695704	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGTGTATTCAAAG	NA	False	NA	NA	False	AATGAA	-19	NA	9675120	9498814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9512816_9512982_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ES.21175.1	chr3	-	4299	3	Antisense	novelGene_ENSMUSG00000103876.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGATAATTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	9726847	9710520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_9714619_9726234_9726378_9726789
ES.21175.2	chr3	-	1675	3	Intergenic	novelGene_17574	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGATAATTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	9716437	9710520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_9711757_9714503_9714619_9716113
ES.21175.3	chr3	-	5948	1	Intergenic	novelGene_17575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTTGATTGATAATTTC	NA	False	NA	NA	False	AATAAA	-12	NA	9716471	9710523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_9710500_9716500
ES.21176.1	chr3	-	8129	10	NNC	ENSMUSG00000027508.16	novel	8256	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.8324913891634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAAAATTTGTTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	9898690	9752538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9757649_9757726_9759190_9761178_9761239_9764284_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9852321_9852381_9898270
ES.21176.2	chr3	-	13242	7	NIC	ENSMUSG00000027508.16	novel	8256	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_4	1.25830573921179	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAAAATTTGTTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	9898690	9752538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9852321_9852381_9898270
ES.21176.3	chr3	-	8217	9	FSM	ENSMUSG00000027508.16	ENSMUST00000161949.8	8256	9	34	5	-15	-5	multi-exon	FALSE	canonical	1	2	junction_6	1.4142135623731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTGTTAAAATTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	9898705	9752543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9759190_9761178_9761239_9764284_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9852321_9852381_9898270
ES.21176.4	chr3	-	3420	2	NNC	ENSMUSG00000027508.16	novel	2406	5	NA	NA	11460	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAAACTTGTTAAAAT	2552	False	NA	NA	False	AATAAA	-11	NA	9758602	9752547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9752975_9755609
ES.21176.5	chr3	-	5213	9	NNC	ENSMUSG00000027508.16	novel	8256	9	NA	NA	3	1436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.27760839478607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGGGTTTTTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	9898687	9755521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9759190_9761178_9761239_9764284_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9895378_9895430_9898270
ES.21176.6	chr3	-	5130	9	FSM	ENSMUSG00000027508.16	ENSMUST00000161949.8	8256	9	50	3076	1	1343	multi-exon	FALSE	canonical	1	2	junction_6	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTTGGCTGCATAT	NA	False	NA	NA	False	AAGAAA	-11	NA	9898689	9755614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_9759190_9761178_9761239_9764284_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9852321_9852381_9898270
ES.21176.7	chr3	-	7932	6	NIC	ENSMUSG00000027508.16	novel	3729	8	NA	NA	15	3	intron_retention	FALSE	canonical	0	0	junction_5	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATAAGCAGTTTTTAT	NA	False	NA	NA	False	CATAAA	-15	NA	9898724	9757823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9817472_9817547_9898270
ES.21176.8	chr3	-	1093	5	NNC	ENSMUSG00000027508.16	novel	3729	8	NA	NA	-4020	-6411	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2.1650635094611	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGCGTCAGCTGTG	4716	False	NA	NA	False	AATACA	-6	NA	9774082	9764237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_9764872_9767017_9767115_9769763_9769816_9771142_9771350_9773979
ES.21177.1	chr3	+	171	1	Intergenic	novelGene_17576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTAATAGACTG	NA	False	NA	NA	False	NA	NA	NA	9956225	9956396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_9956200_9956400
ES.21178.1	chr3	-	170	1	Intergenic	novelGene_17577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAACACACAGGC	NA	False	NA	NA	False	NA	NA	NA	9980206	9980036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_9980000_9980200
ES.21179.1	chr3	+	783	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	0	204	0	68	multi-exon	FALSE	canonical	3	202	junction_1	88.411914732499	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCTGGTATTCTT	NA	False	NA	NA	False	NA	NA	NA	10077607	10081463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
ES.21179.2	chr3	+	2936	3	NIC	ENSMUSG00000027533.11	novel	987	4	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	332	junction_1	42.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGATATGTGTGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	10077636	10081393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_10080204_10080531_10080634_10081126
ES.21179.3	chr3	+	663	4	NNC	ENSMUSG00000027533.11	novel	987	4	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.919117630364	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATGATATGTGTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	10077650	10081392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_10077779_10080036_10080204_10080531_10080634_10081126
ES.2118.1	chr1	+	160	1	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	183060267	183060427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183060300_183060400
ES.21180.1	chr3	-	2718	1	Antisense	novelGene_ENSMUSG00000027533.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAAAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	10082259	10079541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_10079500_10082300
ES.21181.1	chr3	+	218	1	Intergenic	novelGene_17578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTTATTA	NA	False	NA	NA	False	NA	NA	NA	10285389	10285607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_10285400_10285600
ES.21182.1	chr3	-	1993	1	NIC	ENSMUSG00000027530.16	novel	2512	6	NA	NA	5348	-934	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	10313937	10311944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10311900_10313900
ES.21183.1	chr3	-	2412	2	Intergenic	novelGene_17579	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGAATTTGTTTGGAT	NA	False	NA	9	True	NA	NA	NA	10369071	10366626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_10368800_10368832
ES.21184.1	chr3	-	3464	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	50	671	-17	-671	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	10396449	10377686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.10	chr3	-	1939	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	151	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	276.862745041359	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCATTTGGTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	10416370	10404861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416323
ES.21184.11	chr3	-	4585	6	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_5	242.62019701583	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416373	10405012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569
ES.21184.12	chr3	-	4320	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	262.710595794797	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416375	10405012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10416118_10416301
ES.21184.13	chr3	-	4181	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	264.659041340486	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416370	10405012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416228
ES.21184.14	chr3	-	1802	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	9	junction_5	282.589917060906	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGCATTTGATCTATA	NA	False	NA	-2	True	AATAAA	-44	NA	10416374	10405013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412265_10412358_10412472_10413569_10413613_10416301
ES.21184.15	chr3	-	1813	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_6	235.712813848219	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416375	10405014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
ES.21184.17	chr3	-	2015	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_7	283.264342090564	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416356	10405014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10415896_10416118_10416301
ES.21184.18	chr3	-	3351	7	NNC	ENSMUSG00000039795.15	novel	743	7	NA	NA	1086	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_5	235.6810462374	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10415287	10405014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411235_10412224_10412472_10413569
ES.21184.19	chr3	-	1609	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	-3	4	-3	-2	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTATTGCATTTGATCT	NA	False	NA	-5	True	AATAAA	-41	NA	10416380	10405016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ES.21184.2	chr3	-	2537	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	62	1586	-5	412	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTGTTTGTATCTTTG	NA	False	NA	NA	False	GATAAA	-15	NA	10396437	10378601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.20	chr3	-	1573	7	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	272.228253901431	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTATTGCATTTGATCT	NA	False	NA	-5	True	AATAAA	-41	NA	10416374	10405016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412278_10416301
ES.21184.21	chr3	-	1733	7	NNC	ENSMUSG00000039795.15	novel	936	8	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	350.88716926607	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATTATTGCATTTGATC	NA	False	NA	-6	True	AATAAA	-40	NA	10416370	10405017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405963_10406053_10406206_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10416323
ES.21184.25	chr3	-	3945	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	298.294632033498	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTGCATTTGAT	NA	False	NA	-7	True	AATAAA	-39	NA	10416369	10405018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10413746_10416118_10416323
ES.21184.26	chr3	-	2537	7	NNC	ENSMUSG00000039795.15	novel	743	7	NA	NA	-269	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	272.228253901431	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTGCATTTGAT	NA	False	NA	-7	True	AATAAA	-39	NA	10413954	10405018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412900_10413537
ES.21184.27	chr3	-	1892	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	120	junction_5	243.390404266251	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTGCATTTGAT	NA	False	NA	-7	True	AATAAA	-39	NA	10416375	10405018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
ES.21184.28	chr3	-	3973	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	282.975595237469	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTGCATTTGAT	NA	False	NA	-7	True	AATAAA	-39	NA	10416375	10405018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10413746_10416118_10416301
ES.21184.29	chr3	-	4969	7	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-4	intron_retention	TRUE	non_canonical	0	0	junction_5	283.199380099761	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTATTGCATTTGAT	NA	False	NA	-7	True	AATAAA	-39	NA	10416375	10405018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412967_10413492_10416118_10416301
ES.21184.3	chr3	-	2182	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	17	1986	17	12	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCATTGTATTCA	NA	False	NA	0	True	ATTAAA	-29	NA	10396482	10379001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.31	chr3	-	4106	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	242.301296668728	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAATTATTGCATTTGA	NA	False	NA	-8	True	AATAAA	-38	NA	10416375	10405019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416301
ES.21184.34	chr3	-	1725	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	297.92364793685	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416369	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416014_10416153_10416301
ES.21184.35	chr3	-	4132	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	263.845115357399	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416374	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416153_10416301
ES.21184.36	chr3	-	4170	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	283.593899793349	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416374	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10413746_10416118_10416301
ES.21184.37	chr3	-	1735	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_5	254.017916771271	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416373	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411235_10412224_10412472_10413569_10413613_10416301
ES.21184.38	chr3	-	1877	8	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	-2	-13	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	278.12741170704	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416379	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416228
ES.21184.39	chr3	-	5238	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	4	-13	intron_retention	FALSE	canonical	3	339	junction_1	162.290891097847	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416369	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ES.21184.4	chr3	-	2024	8	FSM	ENSMUSG00000027531.17	ENSMUST00000191670.6	1100	8	-8	-916	-8	5	multi-exon	FALSE	canonical	0	0	junction_2	136.151026587449	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCATTTTCTTTCATT	NA	False	NA	-7	True	ATTAAA	-22	NA	10396440	10379008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.40	chr3	-	4158	7	NNC	ENSMUSG00000039795.15	novel	743	7	NA	NA	0	-13	intron_retention	FALSE	canonical	0	0	junction_6	274.462302612864	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCGAGACAATTATT	NA	False	NA	-16	True	AATAAA	-30	NA	10416374	10405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412265_10413569_10416118_10416323
ES.21184.41	chr3	-	3982	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	297.184706874361	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416369	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10413746_10416153_10416301
ES.21184.42	chr3	-	4171	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-24	intron_retention	FALSE	canonical	3	88	junction_6	249.982666065736	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416376	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412265_10413569_10416118_10416301
ES.21184.43	chr3	-	4059	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	4	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	265.47462310022	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416369	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416323
ES.21184.44	chr3	-	3896	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-4	-24	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	273.159637391764	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416381	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411235_10412224_10412265_10413569_10413613_10413746_10416118_10416301
ES.21184.45	chr3	-	1930	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-24	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	295.843180587283	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416378	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416014_10416153_10416301
ES.21184.46	chr3	-	1561	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	260.875136290705	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416376	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416323
ES.21184.48	chr3	-	1612	7	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	-1	-24	combination_of_known_splicesites	FALSE	canonical	2	22	junction_6	265.925845971308	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416375	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10416228
ES.21184.49	chr3	-	1342	4	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	8	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	175.374519877382	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCCTGTAACAAAGCG	NA	False	NA	-27	True	AATAAA	-19	NA	10416365	10405038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10416228
ES.21184.5	chr3	-	3719	1	NIC	ENSMUSG00000027531.17	novel	4185	9	NA	NA	-1015	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCATTTTCTTTCATT	NA	False	NA	-7	True	ATTAAA	-22	NA	10382727	10379008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10379000_10382700
ES.21184.50	chr3	-	2435	7	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	6	-25	intron_retention	FALSE	non_canonical	0	0	junction_5	276.210467256804	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416367	10405039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412967_10413492_10413613_10416301
ES.21184.51	chr3	-	6335	6	NNC	ENSMUSG00000039795.15	novel	743	7	NA	NA	-397	-25	intron_retention	FALSE	non_canonical	0	0	junction_5	296.019323693572	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10414082	10405039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10409983_10410994_10411087_10411169_10411298_10412224_10412909_10413506
ES.21184.52	chr3	-	4865	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	285.562316727354	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416375	10405039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412967_10413492_10416118_10416301
ES.21184.53	chr3	-	1745	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-25	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	270.499332510986	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416375	10405039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10416301
ES.21184.54	chr3	-	4199	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-25	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	283.09999889615	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTCCTGTAACAAAGC	NA	False	NA	-28	True	AATAAA	-18	NA	10416375	10405039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10412358_10412472_10413569_10416118_10416301
ES.21184.55	chr3	-	6054	5	NNC	ENSMUSG00000039795.15	novel	743	7	NA	NA	0	-29	intron_retention	FALSE	non_canonical	0	0	junction_4	200.513559391878	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCTTCCTGTAACA	NA	False	NA	-32	True	AATAAA	-14	NA	10416374	10405043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10412967_10413492
ES.21184.56	chr3	-	1690	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	-29	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	278.727213194191	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCTTCCTGTAACA	NA	False	NA	-32	True	AATAAA	-14	NA	10416375	10405043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10412358_10412472_10413569_10413613_10416301
ES.21184.57	chr3	-	1532	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	245.1696124908	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCTTCCTGTAACA	NA	False	NA	-32	True	AATAAA	-14	NA	10416370	10405043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10413569_10413613_10416301
ES.21184.58	chr3	-	1642	8	FSM	ENSMUSG00000039795.15	ENSMUST00000184644.8	954	8	10	-698	6	-29	multi-exon	FALSE	canonical	3	11	junction_7	262.492293375696	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCTTCCTGTAACA	NA	False	NA	-32	True	AATAAA	-14	NA	10416367	10405043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416228
ES.21184.59	chr3	-	4430	7	NIC	ENSMUSG00000039795.15	novel	954	8	NA	NA	13	-29	intron_retention	FALSE	canonical	1	3	junction_6	277.406290483832	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCTTCCTGTAACA	NA	False	NA	-32	True	AATAAA	-14	NA	10416360	10405043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10416118_10416228
ES.21184.6	chr3	-	5483	15	Fusion	ENSMUSG00000039795.15_ENSMUSG00000027531.17	novel	4185	9	NA	NA	-1	5	intron_retention	FALSE	canonical	0	0	junction_8	199.225707811671	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACCATTTTCTTTCATT	NA	False	NA	-7	True	ATTAAA	-22	NA	10416378	10379008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10405903_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569
ES.21184.60	chr3	-	4317	8	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	-31	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	279.188985806959	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTATGCTTCCTGTAA	NA	False	NA	-34	True	AATAAA	-12	NA	10416370	10405045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10416153_10416301
ES.21184.61	chr3	-	3682	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	6	-284	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	312.752597910873	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACATAGCCTTACTGGA	NA	False	NA	NA	False	ATTAAA	-17	NA	10416367	10405298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405963_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10413746_10416118_10416301
ES.21184.63	chr3	-	3307	9	NNC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	282.975595237469	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTGTCTTAGAATTTAT	NA	False	NA	NA	False	TTTAAA	-10	NA	10416366	10405675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10413746_10416118_10416301
ES.21184.64	chr3	-	3445	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	3	3	combination_of_known_splicesites	FALSE	canonical	3	88	junction_7	242.301296668728	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTGTCTTAGAATTTAT	NA	False	NA	NA	False	TTTAAA	-10	NA	10416370	10405675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10416118_10416301
ES.21184.65	chr3	-	1148	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_6	235.712813848219	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTGTCTTAGAATT	NA	False	NA	NA	False	TTTAAA	-7	NA	10416374	10405678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
ES.21184.66	chr3	-	941	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	3	666	0	0	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTGTCTTAGAATT	NA	False	NA	NA	False	TTTAAA	-7	NA	10416374	10405678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ES.21184.67	chr3	-	3309	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	245.738625824721	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTGCTGTCTTAGAA	NA	False	NA	NA	False	TTTAAA	-5	NA	10416367	10405680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10412224_10412265_10413569_10416118_10416301
ES.21184.68	chr3	-	799	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	1	810	0	54	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTGACTCTTACT	NA	False	NA	NA	False	NA	NA	NA	10416376	10405822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ES.21184.69	chr3	-	1721	1	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	-1	896	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACTGAGCAGTACTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	10416375	10414654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_10414700_10416400
ES.21184.7	chr3	-	2070	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	17	2098	17	-100	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCTGTTAATTA	NA	False	NA	-1	True	ATTAAA	-36	NA	10396482	10379113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.8	chr3	-	1235	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	39	2911	-28	-2	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTATGTTC	NA	False	NA	NA	False	NA	NA	NA	10396460	10379926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ES.21184.9	chr3	-	1767	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	1	-158	0	158	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTTTGTCAGCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	10416376	10404854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ES.21185.1	chr3	+	260	1	Intergenic	novelGene_17580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-8	NA	10418043	10418303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_10418000_10418300
ES.21186.1	chr3	+	1307	6	NNC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	-6791	-4917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.8645833102134	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGAGTTTCAGTTGAGT	NA	False	NA	30	True	AATAAA	-39	NA	10425175	10455480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_10425244_10431447_10431731_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.10	chr3	+	5835	3	NIC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	15	6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	103	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTATTTCTTTTTCTTT	NA	False	NA	7	True	ATTAAA	-22	NA	10432032	10460403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_10432282_10454608_10454763_10454971
ES.21186.11	chr3	+	1631	6	NNC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	58	-5291	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	92.6485833674752	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTAGCAGAGACCTGT	NA	False	NA	10	True	CATAAA	-17	NA	10432075	10455106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_10432282_10449631_10450475_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.12	chr3	+	1608	6	NNC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	17622	-4941	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.1394653194874	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGTTCTAGTGAGTCT	NA	False	NA	6	True	AATAAA	-15	NA	10449639	10455456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_10450180_10450338_10450475_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.13	chr3	+	7960	2	ISM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	20262	0	20211	0	3prime_fragment	FALSE	canonical	3	210	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTATCCTATTTCTTT	NA	False	NA	1	True	ATTAAA	-16	NA	10452228	10460397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_10454763_10454971
ES.21186.14	chr3	+	5426	1	NIC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	22952	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATGTATCCTATTTCT	NA	False	NA	-1	True	ATTAAA	-14	NA	10454969	10460395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_10455000_10460400
ES.21186.2	chr3	+	930	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	-26	5284	-26	-5284	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGACCTGTTTTATAT	NA	False	NA	17	True	CATAAA	-24	NA	10431940	10455113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.3	chr3	+	4098	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	-22	2112	-22	-2112	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTTCTAACAACA	NA	False	NA	NA	False	AATAAA	-21	NA	10431944	10458285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.4	chr3	+	1114	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	18	5056	18	-5056	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCCCGAGGAATACCTG	NA	False	NA	NA	False	NA	NA	NA	10431984	10455341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.5	chr3	+	1217	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	32	4939	-19	-4939	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTCTAGTGAGTCTAT	NA	False	NA	8	True	AATAAA	-17	NA	10431998	10455458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.6	chr3	+	3262	4	NIC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	-19	-5291	intron_retention	FALSE	canonical	3	174	junction_1	15.5848929700813	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTAGCAGAGACCTGT	NA	False	NA	10	True	CATAAA	-17	NA	10431998	10455106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_10432282_10450611_10450790_10452096_10454763_10454971
ES.21186.8	chr3	+	6143	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	53	-8	2	8	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTTCTTTTTCTTTTT	NA	False	NA	9	True	ATTAAA	-24	NA	10432019	10460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ES.21186.9	chr3	+	1229	6	NNC	ENSMUSG00000027536.7	novel	6188	5	NA	NA	13	-2121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.5407174972544	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAATGTGTTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	10432030	10458276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971_10455363_10458136
ES.21187.1	chr3	-	2528	1	Intergenic	novelGene_17581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAATCCCTAACACTAT	NA	False	NA	NA	False	NA	NA	NA	10445321	10442793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_10442800_10445300
ES.21188.1	chr3	-	178	1	Intergenic	novelGene_17582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGATACAA	NA	False	NA	NA	False	NA	NA	NA	10449505	10449327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_10449300_10449500
ES.21189.1	chr3	+	720	1	ISM	ENSMUSG00000027536.7	ENSMUST00000191826.2	4163	5	61179	0	61179	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCCATTCAATTTG	NA	False	NA	NA	False	AATAAA	-14	NA	10493196	10493916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_10493200_10493900
ES.2119.1	chr1	+	2425	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	-12	1866	-12	1	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGATGGTTGTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	183078580	183104465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.10	chr1	+	3503	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	283	493	5	-493	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTTGTCTTCTTAGC	NA	False	NA	NA	False	ATTAAA	-16	NA	183078875	183105838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.11	chr1	+	4482	1	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACTCCTACCCCAA	NA	False	NA	NA	False	NA	NA	NA	183088566	183093048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183088600_183093000
ES.2119.12	chr1	+	1960	2	FSM	ENSMUSG00000042901.11	ENSMUST00000195268.2	626	2	-549	-785	-549	1	multi-exon	FALSE	canonical	3	144	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGATGGTTGTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	183102418	183104465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183103257_183103343
ES.2119.2	chr1	+	3139	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	-7	568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.7488906673272	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCTTTCTCATTTC	NA	False	NA	10	True	ATTAAA	-17	NA	183078585	183105032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183101005_183101158_183103138_183103257_183103343
ES.2119.3	chr1	+	2593	12	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.1739105672759	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGATGGTTGTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	183078587	183104465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183101005_183101277_183103138_183103257_183103343_183103659_183103754
ES.2119.4	chr1	+	2673	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	-2	1608	-2	259	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCCACAACCAAA	NA	False	NA	NA	False	AATAAA	-24	NA	183078590	183104723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.5	chr1	+	2420	10	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.4418666188213	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGATGGTTGTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	183078593	183104463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183079173_183085602_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.6	chr1	+	3940	10	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	4	junction_1	68.4880813277071	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGATGGTTGTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	183078594	183104463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183080704_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.7	chr1	+	2702	10	NIC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_1	69.4418666188213	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGATGGATGGTTGTT	NA	False	NA	NA	False	AATAAA	-10	NA	183078595	183104461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_183079469_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.2119.8	chr1	+	2790	11	NNC	ENSMUSG00000042901.11	novel	4279	10	NA	NA	15	1	intron_retention	FALSE	canonical	0	0	junction_1	88.8956691858495	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGATGGTTGTTACAC	NA	False	NA	NA	False	AATAAA	-14	NA	183078607	183104465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183079469_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183097892_183097989_183099746_183099870_183103138_183103257_183103343
ES.2119.9	chr1	+	2720	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	260	1299	-18	568	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCCTTTCTCATTTC	NA	False	NA	10	True	ATTAAA	-17	NA	183078852	183105032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ES.21190.1	chr3	+	177	1	Intergenic	novelGene_17584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	10497187	10497364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_10497200_10497400
ES.21191.1	chr3	-	3414	5	NNC	ENSMUSG00000027534.17	novel	2288	8	NA	NA	13879	1869	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.4052526498995	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGTCTTAACAGTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	10491268	10481007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10481636_10481800_10484284_10485256_10485377_10485799_10485937_10491222
ES.21191.11	chr3	-	2171	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-22	139	-7	-139	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTAGCTTGACTCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	10505169	10483344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.12	chr3	-	1770	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	75	443	75	348	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAATGTGTTTTGAAG	NA	False	NA	NA	False	TTTAAA	-19	NA	10505072	10483648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.13	chr3	-	1576	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	710	2	81	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTATATTGCTCCAGA	NA	False	NA	NA	False	CATAAA	-15	NA	10505145	10483915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.14	chr3	-	1444	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-10	854	3	-63	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGAACTATAGTCACTG	NA	False	NA	NA	False	TATAAA	-30	NA	10505157	10484059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.15	chr3	-	2149	7	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	1110	2	-319	5prime_fragment	FALSE	canonical	3	117	junction_1	14.46163506969	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCACTAGCATACTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	10505145	10484315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.16	chr3	-	2120	1	Intergenic	novelGene_17583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	10497945	10495825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_10495800_10497900
ES.21191.2	chr3	-	4326	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	52	-1866	37	1866	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTTGTCTTAACAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	10505110	10481010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.3	chr3	-	3123	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	-837	2	508	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATTAAAATGCTATATAT	NA	False	NA	NA	False	AATAAA	-18	NA	10505145	10482368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.4	chr3	-	2858	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	23	-593	23	264	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAAAGCCGGGCAGTG	NA	False	NA	NA	False	AAGAAA	-3	NA	10505124	10482612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.5	chr3	-	2635	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	-15	-332	0	3	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTTATCAGTGTCTGA	NA	False	NA	5	True	AATAAA	-30	NA	10505162	10482873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.6	chr3	-	2285	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	2	1	2	-1	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGAGTTTCTTTAG	NA	False	NA	0	True	ATTAAA	-19	NA	10505145	10483206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.8	chr3	-	2142	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	38	332	23	-3	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGGGTGAGTTTCTTT	NA	False	NA	-2	True	ATTAAA	-17	NA	10505124	10483208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21191.9	chr3	-	2133	7	NNC	ENSMUSG00000027534.17	novel	2512	7	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.4009446239891	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGGGTGAGTTTCTT	NA	False	NA	-3	True	ATTAAA	-16	NA	10505157	10483209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_10484284_10485799_10485937_10491222_10491252_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ES.21192.1	chr3	-	723	2	Intergenic	novelGene_17585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCCTTGTTTATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	10553459	10534857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_10535329_10553207
ES.21193.1	chr3	-	1679	1	Intergenic	novelGene_17586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	11080252	11078573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11078600_11080300
ES.21193.2	chr3	-	770	2	Intergenic	novelGene_17587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	11079650	11078577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11079168_11079470
ES.21193.3	chr3	-	1436	1	Intergenic	novelGene_17588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATAAGCCATACCTCA	NA	False	NA	NA	False	NA	NA	NA	11080247	11078811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11078800_11080200
ES.21194.1	chr3	+	5097	1	Intergenic	novelGene_17589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	11191166	11196263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_11191200_11196300
ES.21195.1	chr3	-	202	1	Intergenic	novelGene_17590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTTCTCTTGGGTGAG	NA	False	NA	NA	False	NA	NA	NA	11284506	11284304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11284300_11284500
ES.21196.1	chr3	-	3260	2	Intergenic	novelGene_17591	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACAAACCATCAGATC	NA	False	NA	NA	False	NA	NA	NA	11292060	11288733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11290900_11290966
ES.21197.1	chr3	-	178	1	Intergenic	novelGene_17592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAGAAGTACA	NA	False	NA	NA	False	NA	NA	NA	11875672	11875494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_11875500_11875700
ES.21198.1	chr3	-	4276	1	Intergenic	novelGene_17593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATGAAATACAATTACC	NA	False	NA	NA	False	NA	NA	NA	12711811	12707535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_12707500_12711800
ES.21199.1	chr3	+	2559	3	Genic_Genomic	ENSMUSG00000095661.2	novel	2798	1	NA	NA	-46	11	multi-exon	TRUE	non_canonical	0	0	junction_2	29.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGTAAGGATAAACATAA	NA	False	NA	NA	False	AATAAA	-43	NA	12920849	12923704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_12921085_12921211_12921867_12922035
ES.212.1	chr1	-	175	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	30965806	30965631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_30965600_30965800
ES.2120.1	chr1	-	3454	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	-35	-6	-22	4	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGATTTATGTGGTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	183078835	183057911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ES.2120.11	chr1	-	3441	14	NNC	ENSMUSG00000046836.14	novel	3413	14	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.666589620246	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGCTGGATTTATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	183078834	183057916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062504_183062774_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ES.2120.12	chr1	-	5462	13	NIC	ENSMUSG00000046836.14	novel	2868	13	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	10	junction_5	34.3288832067433	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGCTGGATTTATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	183078833	183057916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183076015_183076340_183076429_183078446
ES.2120.13	chr1	-	3296	13	NIC	ENSMUSG00000046836.14	novel	3413	14	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	43.4328184927276	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGCTGGATTTATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	183078789	183057916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183075897_183076015_183076340_183076429_183078725
ES.2120.15	chr1	-	3486	14	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	34.8671188418453	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCGCTGGATTTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	183078550	183057917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074190_183075897_183076015_183076340_183076429_183078446
ES.2120.16	chr1	-	3417	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.6011767640095	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078559	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076396_183078446
ES.2120.18	chr1	-	5620	12	NIC	ENSMUSG00000046836.14	novel	2868	13	NA	NA	14	-1	intron_retention	FALSE	canonical	3	10	junction_5	35.5767125988173	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078522	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183076015_183076340_183076429_183078446
ES.2120.19	chr1	-	3525	15	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	446	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	51.3584839880523	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078090	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183074763_183074926_183075897_183076015_183076340_183076429_183078064
ES.2120.20	chr1	-	3423	14	NIC	ENSMUSG00000046836.14	novel	3413	14	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	40.5356151387216	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078827	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ES.2120.22	chr1	-	3284	13	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.4263903639107	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078550	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076018_183076340_183076429_183078446
ES.2120.23	chr1	-	3425	14	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	32.9828716531051	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCGCTGGATTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	183078550	183057918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ES.2120.24	chr1	-	6710	12	NIC	ENSMUSG00000046836.14	novel	2868	13	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	10	junction_5	35.7842478849873	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078542	183057919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183069401_183073470_183073568_183074038_183076015_183076340_183076429_183078446
ES.2120.25	chr1	-	4857	12	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-18	-2	intron_retention	FALSE	canonical	1	1	junction_4	38.3946449434108	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078831	183057919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064053_183064136_183065696_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076429_183078446
ES.2120.26	chr1	-	3567	15	NNC	ENSMUSG00000046836.14	novel	3413	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	53.4033553940849	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078810	183057919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183074763_183074926_183075897_183076015_183076340_183076429_183078725
ES.2120.28	chr1	-	3722	13	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	14	-2	intron_retention	FALSE	canonical	3	10	junction_5	34.3288832067433	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTCGCTGGATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	183078522	183057919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064120_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076429_183078446
ES.2120.29	chr1	-	5457	12	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	110	junction_3	11.2330680662862	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTTCGCTGGATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	183078552	183057920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183076015_183076340_183076429_183078446
ES.2120.3	chr1	-	8055	8	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-1030	4	intron_retention	FALSE	canonical	3	98	junction_1	13.760339340856	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGATTTATGTGGTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	183075299	183057911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183062515_183062778_183062861_183064049_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038
ES.2120.30	chr1	-	5175	6	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-164	-3	intron_retention	FALSE	canonical	1	1	junction_2	48.3114893167247	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTTCGCTGGATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	183067910	183057920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183062515_183062778_183062861_183064053_183064136_183065696_183065787_183066600_183066707_183067689
ES.2120.31	chr1	-	3170	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-26	286	-26	-284	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGGCCATGTTCACGT	NA	False	NA	NA	False	AGTAAA	-18	NA	183078562	183058201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ES.2120.32	chr1	-	2217	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	42	-458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	35.6111477792256	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGGTGGACACTGTG	NA	False	NA	NA	False	AAGAAA	-15	NA	183078494	183059089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076018_183076340_183076429_183078446
ES.2120.33	chr1	-	2135	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	12	1266	12	-552	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCCTTCGTAAACTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	183078788	183059183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ES.2120.34	chr1	-	1598	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	465	-1118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.5840209290392	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCTGGGCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	183078071	183059749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076018_183076340_183076429_183077982
ES.2120.35	chr1	-	1599	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-6	1837	-6	-1121	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGCTTCTGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	183078542	183059752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ES.2120.4	chr1	-	3490	14	NIC	ENSMUSG00000046836.14	novel	3413	14	NA	NA	-14	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	42.1605834032145	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGATTTATGTGGTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	183078827	183057911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074190_183075897_183076015_183076340_183076429_183078725
ES.2120.5	chr1	-	3730	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	-297	-3	-20	3	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGGATTTATGTGGTGA	NA	False	NA	NA	False	AATAAA	-20	NA	183078833	183057912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ES.2120.6	chr1	-	5198	13	NIC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	-14	2	intron_retention	FALSE	canonical	3	98	junction_3	13.4130429889053	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGATTTATGTGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	183078550	183057913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183076015_183076340_183076429_183078446
ES.2120.7	chr1	-	3483	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	35.3628695721755	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078525	183057915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074210_183075897_183076015_183076340_183076429_183078446
ES.2120.8	chr1	-	3377	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	435	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	34.3655944636527	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078101	183057915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078064
ES.2120.9	chr1	-	3486	14	NNC	ENSMUSG00000046836.14	novel	3430	14	NA	NA	465	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.7563241300452	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078071	183057915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076018_183076340_183076429_183077928
ES.21200.1	chr3	+	3373	19	NNC	ENSMUSG00000027550.15	novel	3391	19	NA	NA	-1	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.9255532593383	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGGAGCTATCATAATAA	NA	False	NA	NA	False	AATAAA	-19	NA	14598846	14631107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604687_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.10	chr3	+	3969	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-12	1681	-12	214	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATATCATTAATAA	NA	False	NA	NA	False	AATATA	-9	NA	14598870	14631680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.11	chr3	+	3760	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-12	1890	-12	5	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCTGATCTAGAAGAG	NA	False	NA	NA	False	ATTAAA	-24	NA	14598870	14631471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.12	chr3	+	2677	2	NIC	ENSMUSG00000027550.15	novel	1518	10	NA	NA	-12	-14717	intron_retention	FALSE	canonical	3	64	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGTGAGGAAAACCTA	NA	False	NA	NA	False	AATGAA	-37	NA	14598870	14601816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14601265_14601533
ES.21200.13	chr3	+	5650	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-10	-2	-10	2	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCATTTCTATGTAC	NA	False	NA	22	True	AATAAA	-22	NA	14598872	14633363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.14	chr3	+	5863	19	NIC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	19.8171424731839	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14598873	14633361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616231_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.15	chr3	+	3834	18	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-7	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	25.4072708444789	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGTCTGATCTAGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	14598875	14631468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612739_14613167_14613317_14615310_14615516_14616447_14616588_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.16	chr3	+	5002	17	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	9	-59	intron_retention	FALSE	non_canonical	0	0	junction_1	27.2752176893238	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGATGGAGCTATCATAA	NA	False	NA	NA	False	AATAAA	-16	NA	14598892	14631104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601063_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14612739_14613167_14613317_14615310_14615516_14616447_14616588_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.17	chr3	+	7845	17	NIC	ENSMUSG00000027550.15	novel	3391	19	NA	NA	9	-2	intron_retention	FALSE	canonical	2	8	junction_6	19.4413179530093	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATGCATCATTTCTAT	NA	False	NA	18	True	AATAAA	-18	NA	14598892	14633359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.18	chr3	+	4497	18	ISM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	9	1523	9	-1523	5prime_fragment	FALSE	canonical	2	8	junction_6	19.0513783569861	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTGGATTCACCGATT	NA	False	NA	NA	False	CATAAA	-33	NA	14598892	14629640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018
ES.21200.19	chr3	+	5564	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	27	-2200	27	2	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCATTTCTATGTAC	NA	False	NA	22	True	AATAAA	-22	NA	14598910	14633363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.2	chr3	+	3559	20	NNC	ENSMUSG00000027550.15	novel	3391	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.1764522479794	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGTTGATAATTGCA	NA	False	NA	NA	False	CATAAA	-23	NA	14598848	14631160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14620320_14620457_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.20	chr3	+	3552	7	ISM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	28	20246	27	-3418	intron_retention	FALSE	canonical	3	61	junction_5	17.1464281994822	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTGCTGACTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	14598910	14613115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555
ES.21200.21	chr3	+	2906	1	NIC	ENSMUSG00000027550.15	novel	3359	19	NA	NA	27	-14717	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGTGAGGAAAACCTA	NA	False	NA	NA	False	AATGAA	-37	NA	14598910	14601816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14598900_14601800
ES.21200.22	chr3	+	3335	19	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-23	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.0292995260986	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGATGGAGCTATCATAA	NA	False	NA	NA	False	AATAAA	-16	NA	14598915	14631104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612457_14613182_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.23	chr3	+	6729	17	NIC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-17	-23	intron_retention	FALSE	canonical	3	53	junction_7	12.9914334755638	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCGTGTCTCTGTGCT	NA	False	NA	NA	False	CATAAA	-3	NA	14598921	14631140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018
ES.21200.24	chr3	+	7430	18	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_7	20.3830107694541	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14598928	14633361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14612739_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.25	chr3	+	5973	18	ISM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	46	2257	-10	-59	intron_retention	FALSE	canonical	3	53	junction_7	12.6209031860574	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGATGGAGCTATCATAA	NA	False	NA	NA	False	AATAAA	-16	NA	14598928	14631104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018
ES.21200.26	chr3	+	4700	19	NIC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	-8	-23	combination_of_known_junctions	FALSE	canonical	2	4	junction_18	19.2280819584916	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCGTGTCTCTGTGCT	NA	False	NA	NA	False	CATAAA	-3	NA	14598930	14631140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14629461
ES.21200.27	chr3	+	3275	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	57	2306	1	-108	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATTGTATATGTGGT	NA	False	NA	NA	False	AATAGA	-15	NA	14598939	14631055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.28	chr3	+	3118	18	NIC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	5	-55	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.280506848904	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAGCTATCATAATAAC	NA	False	NA	NA	False	AATAAA	-20	NA	14598943	14631108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.3	chr3	+	5279	19	NIC	ENSMUSG00000027550.15	novel	3391	19	NA	NA	1	219	combination_of_known_junctions	FALSE	canonical	2	4	junction_18	23.2605345840504	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATCATTAATAAGCTAA	NA	False	NA	NA	False	AATATA	-14	NA	14598848	14631685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14629461
ES.21200.30	chr3	+	3529	19	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	6	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9974746025286	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAGCTATCATAATAAC	NA	False	NA	NA	False	AATAAA	-20	NA	14598944	14631108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601068_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616231_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.32	chr3	+	5234	17	ISM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	2649	0	2538	0	3prime_fragment	FALSE	canonical	3	53	junction_5	7.96648252053565	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14601531	14633361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.33	chr3	+	7939	13	NNC	ENSMUSG00000027550.15	novel	3700	11	NA	NA	3896	-50	intron_retention	FALSE	non_canonical	0	0	junction_8	26.3069488074074	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTATCATAATAACTAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	14602889	14631113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14602954_14604688_14604865_14604970_14605175_14610555_14612455_14613167_14613317_14615310_14616588_14619363_14619566_14622248_14622436_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018
ES.21200.34	chr3	+	2753	16	NNC	ENSMUSG00000027550.15	novel	3700	11	NA	NA	3900	-59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.8428447343048	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGATGGAGCTATCATAA	NA	False	NA	NA	False	AATAAA	-16	NA	14602893	14631104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14602954_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.35	chr3	+	2728	16	NNC	ENSMUSG00000027550.15	novel	3700	11	NA	NA	3913	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	26.6353149033384	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTTTTCTCTCTGAA	NA	False	NA	NA	False	AATAAA	-26	NA	14602906	14637717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14602954_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628020_14628155_14637463
ES.21200.36	chr3	+	2953	15	NNC	ENSMUSG00000027550.15	novel	5638	19	NA	NA	5975	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.6692076867805	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGCACTTTTCGTGT	1219	False	NA	NA	False	AATAAA	-43	NA	14604968	14631131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14605175_14610555_14610753_14612306_14612455_14612595_14612739_14613167_14613317_14615310_14615516_14616231_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.37	chr3	+	4362	13	NNC	ENSMUSG00000027550.15	novel	3391	19	NA	NA	5975	-54	intron_retention	FALSE	non_canonical	0	0	junction_2	25.5814331541886	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGCTATCATAATAACT	1219	False	NA	NA	False	AATAAA	-21	NA	14604968	14631109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14605127_14610555_14612739_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.38	chr3	+	2019	11	ISM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	14283	57	-10	-57	3prime_fragment	FALSE	canonical	3	54	junction_5	8.18840643837371	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGGAGCTATCATAATA	9417	False	NA	NA	False	AATAAA	-18	NA	14613166	14631106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.39	chr3	+	4029	2	ISM	ENSMUSG00000027550.15	ENSMUST00000167858.8	3700	11	14849	-1895	12586	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14628025	14633361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14628155_14629461
ES.21200.40	chr3	+	6674	1	Genic_Genomic	ENSMUSG00000027550.15	novel	NA	NA	NA	NA	14446	-1159	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	14629885	14636559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_14629900_14636600
ES.21200.41	chr3	+	1891	9	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	103.452585757921	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1896	False	NA	24	True	AATAAA	-17	NA	14643674	14671363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668183_14668273_14668697_14668966_14670184_14670230_14670667
ES.21200.42	chr3	+	1803	8	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.8764085387313	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1906	False	NA	24	True	AATAAA	-17	NA	14643684	14671363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670173_14670230_14670667
ES.21200.43	chr3	+	4309	6	NIC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-6	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	89.1636697315672	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGATCTTTGGGGGA	1916	False	NA	25	True	AATAAA	-18	NA	14643694	14671364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14668966_14670184_14670230_14670667
ES.21200.44	chr3	+	1793	8	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	75.3164751470183	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1917	False	NA	24	True	AATAAA	-17	NA	14643695	14671363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14652369_14652480_14653199_14653374_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.45	chr3	+	1781	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	-35	5	-5	-5	multi-exon	FALSE	non_canonical	0	0	junction_3	75.6598186837988	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1917	False	NA	24	True	AATAAA	-17	NA	14643695	14671363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.46	chr3	+	885	6	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	2	-3547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.512685766524	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTGAAGGAAAAAAAAAAA	1924	False	NA	NA	False	NA	NA	NA	14643702	14667821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14646195_14646267_14652369_14652480_14653199_14653362_14666059_14666107_14667707
ES.21200.48	chr3	+	2697	7	NIC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_3	81.677040157494	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATCTTTGGGGGAATGT	1931	False	NA	29	True	AATAAA	-22	NA	14643709	14671368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14668966_14670184_14670230_14670667
ES.21200.49	chr3	+	1745	7	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.4836384394642	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	1937	False	NA	24	True	AATAAA	-17	NA	14643715	14671363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14652369_14652480_14653199_14653374_14667688_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.5	chr3	+	3338	19	NNC	ENSMUSG00000027550.15	novel	3359	19	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.447790175074	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGTTTTCTCTCTGAA	NA	False	NA	NA	False	AATAAA	-26	NA	14598861	14637717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622254_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
ES.21200.52	chr3	+	1755	7	NNC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.4836384394642	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTATTGATCTTT	1941	False	NA	19	True	AATAAA	-12	NA	14643719	14671358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14652369_14652480_14653199_14653374_14667669_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.55	chr3	+	2489	5	NNC	ENSMUSG00000027552.15	novel	1751	8	NA	NA	-5	-3523	intron_retention	FALSE	non_canonical	0	0	junction_4	94.7813272749438	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTGTCCTAAGAGAG	1947	False	NA	NA	False	NA	NA	NA	14643725	14667845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14644084_14646195_14646267_14652369_14652480_14653199_14653364_14666059
ES.21200.57	chr3	+	2741	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	51	-1041	51	1040	multi-exon	FALSE	non_canonical	0	0	junction_3	75.6598186837988	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTTGTTATGCATAAA	2003	False	NA	NA	False	ATTAAA	-20	NA	14643781	14672409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.58	chr3	+	558	5	ISM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	233	3542	233	-3542	5prime_fragment	FALSE	non_canonical	0	0	junction_3	91.6525367897692	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAAG	2185	False	NA	NA	False	NA	NA	NA	14643963	14667826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707
ES.21200.59	chr3	+	4247	3	ISM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	6450	3523	6450	-3523	intron_retention	FALSE	non_canonical	0	0	junction_2	112.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTGTCCTAAGAGAG	344	False	NA	NA	False	NA	NA	NA	14650180	14667845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14652480_14653199_14653362_14666059
ES.21200.60	chr3	+	2029	7	ISM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	7995	13	7995	-13	3prime_fragment	FALSE	non_canonical	0	0	junction_2	80.7742051785236	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGACTTTATTGATC	1889	False	NA	16	True	AATAAA	-9	NA	14651725	14671355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.61	chr3	+	4789	1	NIC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	19326	-3523	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTGTCCTAAGAGAG	1178	False	NA	NA	False	NA	NA	NA	14663056	14667845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14663100_14667800
ES.21200.62	chr3	+	4052	1	NIC	ENSMUSG00000027552.15	novel	1779	8	NA	NA	23575	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGACTTTATTGATCTT	5427	False	NA	18	True	AATAAA	-11	NA	14667305	14671357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14667300_14671400
ES.21200.7	chr3	+	4484	25	Fusion	ENSMUSG00000027552.15_ENSMUSG00000027550.15	novel	3359	19	NA	NA	14	-4	multi-exon	FALSE	non_canonical	0	0	junction_20	65.4223458256683	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGATCTTTGGGGGA	NA	False	NA	25	True	AATAAA	-18	NA	14598861	14671364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ES.21200.8	chr3	+	3451	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	-13	2200	-13	-2	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTTGATAATTGCAC	NA	False	NA	NA	False	CATAAA	-24	NA	14598869	14631161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ES.21200.9	chr3	+	3335	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	22	2	-13	-2	multi-exon	FALSE	canonical	2	3	junction_18	19.4050394371038	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACAGTTTTCTCTCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	14598869	14637716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
ES.21201.1	chr3	-	1518	1	Antisense	novelGene_ENSMUSG00000027552.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTAAAGACTATACT	NA	False	NA	NA	False	ATTAAA	-16	NA	14670991	14669473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_14669500_14671000
ES.21202.1	chr3	-	455	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	-13	-7	-13	7	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTTAATGTACAGG	NA	False	NA	7	True	AATAAA	-30	NA	14676358	14671336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
ES.21202.10	chr3	-	648	4	NNC	ENSMUSG00000078784.9	novel	559	4	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	2521.91743630825	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATTTCTTTAAATCT	NA	False	NA	-7	True	AATAAA	-16	NA	14676267	14671350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_14671469_14672236_14672354_14674600_14674718_14675971
ES.21202.11	chr3	-	650	5	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	2521.17416841836	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATTTCTTTAAATCT	NA	False	NA	-7	True	AATAAA	-16	NA	14676326	14671350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_14671469_14671894_14672136_14672236_14672354_14674600_14674718_14676269
ES.21202.12	chr3	-	5115	1	Genic_Genomic	ENSMUSG00000078784.9	novel	NA	NA	NA	NA	-2670	343	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGATTAAGTAGATCATAC	NA	False	NA	NA	False	NA	NA	NA	14679015	14673900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_14673900_14679000
ES.21202.13	chr3	-	859	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	-8	-343	3	343	multi-exon	FALSE	canonical	3	4849	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGATTAAGTAGATCATAC	NA	False	NA	NA	False	NA	NA	NA	14676311	14673900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_14674718_14676269
ES.21202.2	chr3	-	3416	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	-8	-2900	3	0	multi-exon	FALSE	canonical	3	4849	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676311	14671343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_14674718_14676269
ES.21202.3	chr3	-	363	3	FSM	ENSMUSG00000078784.9	ENSMUST00000185423.2	278	3	-77	-8	-46	-1	multi-exon	TRUE	canonical	3	25	junction_1	2412	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTAAATCTTGTTAA	NA	False	NA	-1	True	AATAAA	-22	NA	14676391	14671344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_14671469_14674600_14674718_14676269
ES.21202.4	chr3	-	425	4	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2391.52034395603	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTAAATCTTGTTA	NA	False	NA	-2	True	AATAAA	-21	NA	14676328	14671345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_14671478_14672236_14672354_14674600_14674718_14676269
ES.21202.5	chr3	-	1184	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	-7	-3	-7	-2	multi-exon	FALSE	canonical	3	4849	junction_2	211	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTAAATCTTGTTA	NA	False	NA	-2	True	AATAAA	-21	NA	14676328	14671345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_14672354_14674600_14674718_14676269
ES.21202.6	chr3	-	4965	1	NIC	ENSMUSG00000078784.9	novel	435	4	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676313	14671348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_14671300_14676300
ES.21202.9	chr3	-	1085	4	NNC	ENSMUSG00000078784.9	novel	435	4	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	2375.53451295118	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATTTCTTTAAATCT	NA	False	NA	-7	True	AATAAA	-16	NA	14676335	14671350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_14672136_14672236_14672354_14674600_14674718_14676269
ES.21203.1	chr3	-	267	1	Intergenic	novelGene_17594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGTCAAGAAACATCAT	NA	False	NA	NA	False	NA	NA	NA	14685787	14685520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_14685500_14685800
ES.21204.1	chr3	+	1998	9	NNC	ENSMUSG00000027555.9	novel	2299	7	NA	NA	-567	-1192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9919389684109	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCCTTCCTGACAAT	1612	False	NA	12	True	ATTAAA	-17	NA	14706219	14726870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14706388_14706481_14707183_14708612_14708754_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ES.21204.2	chr3	+	1182	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	-73	1190	-73	-1190	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCTTCCTGACAATAA	2106	False	NA	14	True	ATTAAA	-19	NA	14706713	14726872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ES.21204.3	chr3	+	1690	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	609	0	-609	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTAAGCCATTCATT	2179	False	NA	NA	False	ATTAAA	-22	NA	14706786	14727453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ES.21204.4	chr3	+	2084	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	215	0	-215	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTACTGTCACATAAG	2179	False	NA	NA	False	AGTAAA	-12	NA	14706786	14727847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ES.21204.5	chr3	+	2257	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	46	-4	46	4	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTTTTGGAAGATTTTT	2225	False	NA	NA	False	AATAAA	-19	NA	14706832	14728066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ES.21204.6	chr3	+	2217	1	Intergenic	novelGene_17595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTTGTTCTTAAACA	NA	False	NA	NA	False	TATAAA	-28	NA	14715869	14718086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_14715900_14718100
ES.21204.7	chr3	+	1478	3	ISM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	13601	1190	13601	-1190	3prime_fragment	FALSE	canonical	3	117	junction_1	17.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCTTCCTGACAATAA	NA	False	NA	14	True	ATTAAA	-19	NA	14720387	14726872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_14721352_14721968_14722125_14726514
ES.21205.1	chr3	+	1763	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951274	14965830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.2	chr3	+	1545	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	-33	-193	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTTGTAGCAAAGTTA	NA	False	NA	11	True	ATTAAA	-21	NA	14951299	14965637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.3	chr3	+	1955	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	-168	1	-13	-1	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGTGCCTGATTGTC	NA	False	NA	10	True	AATAAA	-13	NA	14951319	14965829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.4	chr3	+	1515	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	80	193	80	-193	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTTGTAGCAAAGTTA	NA	False	NA	11	True	ATTAAA	-21	NA	14951567	14965637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.5	chr3	+	1405	6	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	52	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	53.8390193075617	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGTGCCTGATTGTC	NA	False	NA	10	True	AATAAA	-13	NA	14951750	14965829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_14951847_14952893_14953092_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.6	chr3	+	1318	7	NNC	ENSMUSG00000027562.13	novel	587	4	NA	NA	175	-194	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49.6736572261619	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTTGTAGCAAAGTT	NA	False	NA	10	True	ATTAAA	-20	NA	14951873	14965636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_14951957_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ES.21205.7	chr3	+	2646	1	Intergenic	novelGene_17596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATATTTGTAGTTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	14955387	14958033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_14955400_14958000
ES.21206.1	chr3	+	213	1	Intergenic	novelGene_17597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGCCACGAGGAAGACA	NA	False	NA	NA	False	NA	NA	NA	15610124	15610337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_15610100_15610300
ES.21207.1	chr3	+	1450	1	Intergenic	novelGene_17599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCACAGGCATGGAACT	NA	False	NA	NA	False	AATAAA	-42	NA	15685327	15686777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_15685300_15686800
ES.21207.2	chr3	+	1321	2	Intergenic	novelGene_17598	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	15685327	15686755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_15685511_15685617
ES.21208.1	chr3	+	160	1	Intergenic	novelGene_17600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAATAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	15909439	15909599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_15909400_15909600
ES.21209.1	chr3	-	177	1	Intergenic	novelGene_17601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	16221749	16221572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_16221600_16221700
ES.2121.1	chr1	+	177	1	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAACAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	183107309	183107486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183107300_183107500
ES.21210.1	chr3	+	5186	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-84	0	-84	0	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237291	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.10	chr3	+	3336	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-53	298	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	210.849604115245	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATCTGCATTAGTTC	NA	False	NA	NA	False	AATACA	-16	NA	16237322	16269468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16257989_16259589_16268118
ES.21210.11	chr3	+	3123	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-51	2030	-51	1	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATGTTTTATTGATG	NA	False	NA	6	True	ATTAAA	-18	NA	16237324	16269171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.12	chr3	+	4616	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	-72	-1348	-48	-501	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTATTGGTCCTGTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	16237327	16270518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.13	chr3	+	3006	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	-44	-508	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	165.086908929812	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAGACATTATTGGTC	NA	False	NA	NA	False	AATAAA	-17	NA	16237331	16270511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16268118
ES.21210.14	chr3	+	3413	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-44	1733	-44	298	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATCTGCATTAGTTC	NA	False	NA	NA	False	AATACA	-16	NA	16237331	16269468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.15	chr3	+	5119	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237333	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
ES.21210.16	chr3	+	3141	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-63	1851	-39	-2	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGATGTTTTATTG	NA	False	NA	3	True	ATTAAA	-15	NA	16237336	16269168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.18	chr3	+	5303	7	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	168.232395479851	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237354	16271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.19	chr3	+	10310	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-19	-5189	-19	5189	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTGTCTTTCTGTATC	NA	False	NA	NA	False	NA	NA	NA	16237356	16276390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.2	chr3	+	5817	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-79	-3	intron_retention	FALSE	canonical	3	151	junction_3	124.547932540047	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237296	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16259589_16268118
ES.21210.20	chr3	+	4972	6	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	168.472430979077	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237359	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118_16269909_16270054
ES.21210.21	chr3	+	3875	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-12	1239	-12	792	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAAGGGTGACCTTGT	NA	False	NA	NA	False	TTTAAA	-40	NA	16237363	16269962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.22	chr3	+	4341	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-11	-504	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	210.849604115245	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACATTATTGGTCCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	16237364	16270515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16257989_16259589_16268118
ES.21210.23	chr3	+	5018	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	210.849604115245	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237370	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16257989_16259589_16268118
ES.21210.24	chr3	+	3811	5	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-4	-503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	186.832143915334	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237371	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243711_16258582_16259589_16268118
ES.21210.25	chr3	+	4938	6	NNC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	189.263202974059	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGATTAGTTCATTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	16237381	16271014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16241250_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.26	chr3	+	5214	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	187.495833287036	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237384	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.27	chr3	+	3468	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	11	1623	11	408	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTGATTTATATAATT	NA	False	NA	NA	False	NA	NA	NA	16237386	16269578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.29	chr3	+	5091	7	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	168.232395479851	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTTCATTTACATTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	16237387	16271020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.3	chr3	+	5207	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-96	-182	-72	0	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237303	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.30	chr3	+	5519	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	147	junction_3	142.494517438391	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237390	16271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.31	chr3	+	4413	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-9	-500	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	174.069669960048	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGGTCCTGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	16237390	16270519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.32	chr3	+	4649	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-9	289	-9	-289	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTAGTGCTTAATTC	NA	False	NA	NA	False	TTTAAA	-20	NA	16237390	16270730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.33	chr3	+	4901	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	16	185	-8	-3	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAGTTCATTTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	16237391	16271016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.34	chr3	+	3171	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	187.495833287036	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGATGTTTTATTG	NA	False	NA	3	True	ATTAAA	-15	NA	16237397	16269168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.35	chr3	+	5478	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	260	junction_2	91.8851940678632	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237398	16271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.36	chr3	+	5136	7	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	178.066154997393	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237400	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16241250_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.37	chr3	+	3188	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	7	1	7	-1	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGATGTTTTATTGA	NA	False	NA	4	True	ATTAAA	-16	NA	16237406	16269169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.38	chr3	+	3046	5	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	186.832143915334	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGATGTTTTATTG	NA	False	NA	3	True	ATTAAA	-15	NA	16237409	16269168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243739_16257989_16259589_16268118
ES.21210.39	chr3	+	5005	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	187.495833287036	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAGTTCATTTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	16237411	16271016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.4	chr3	+	4670	7	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	-67	-499	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	168.232395479851	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGGTCCTGTGATTT	NA	False	NA	NA	False	AATAAA	-26	NA	16237308	16270520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.40	chr3	+	4329	6	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	13	-503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	168.472430979077	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237412	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16258767_16258817_16259589_16268118
ES.21210.41	chr3	+	5059	5	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	183.145263384014	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237412	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243647_16243728_16257989_16259589_16268118
ES.21210.42	chr3	+	2114	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	40	2948	16	-917	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCTTTGAACCCTTTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	16237415	16268253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.43	chr3	+	4838	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	18	73	18	-73	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTGTGTATTTTTTG	NA	False	NA	NA	False	TTTAAA	-39	NA	16237417	16270946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.44	chr3	+	2505	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	22	2402	22	-553	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGGAGTTCAAGTCTGA	NA	False	NA	8	True	ATTAAA	-24	NA	16237421	16268617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.45	chr3	+	5064	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	174.069669960048	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237421	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.46	chr3	+	4584	8	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	23	-503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	185.965763801089	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237422	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16244953_16244986_16257350_16257384_16257989_16259589_16268118
ES.21210.47	chr3	+	2995	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGATGTTTTATTG	NA	False	NA	3	True	ATTAAA	-15	NA	16237424	16269168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
ES.21210.48	chr3	+	3356	6	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	26	298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	151.514487756122	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATCTGCATTAGTTC	NA	False	NA	NA	False	AATACA	-16	NA	16237425	16269468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259604_16268129
ES.21210.49	chr3	+	3016	5	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	194.330903358164	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTGATGTTTTATT	NA	False	NA	2	True	ATTAAA	-14	NA	16237427	16269167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16243641_16243728_16257358_16257384_16257989_16259589_16268118
ES.21210.5	chr3	+	4452	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	-57	-500	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGGTCCTGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	16237318	16270519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
ES.21210.50	chr3	+	5218	7	NNC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	186.044573512192	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237430	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257358_16257384_16257989_16259589_16268118
ES.21210.51	chr3	+	5001	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	31	-503	intron_retention	FALSE	canonical	3	151	junction_3	124.547932540047	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237430	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16259589_16268118
ES.21210.52	chr3	+	4915	6	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	168.472430979077	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237431	16271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16258595_16258723_16259589_16268118
ES.21210.53	chr3	+	5135	7	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	188.394459107008	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237431	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16242856_16242916_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.54	chr3	+	5066	6	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	34	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.304210770411	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16237433	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257997_16259589_16268118
ES.21210.55	chr3	+	4243	3	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	39	-503	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	229	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237438	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16257989_16259589_16268118
ES.21210.56	chr3	+	4740	3	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	225	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	229	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTGTTCTTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	16237624	16271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16237685_16257989_16259589_16268118
ES.21210.57	chr3	+	4810	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	235	-1849	235	0	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTTCATTTACATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	16237634	16271019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21210.58	chr3	+	4951	5	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	682	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.737639066052	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16238081	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16238111_16243641_16243728_16257989_16259589_16264532_16264687_16268118
ES.21210.59	chr3	+	9938	4	ISM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	1102	-179	1102	-3	3prime_fragment	FALSE	canonical	3	147	junction_2	157.928957305352	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16238501	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.6	chr3	+	2945	6	NNC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.472430979077	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTGATGTTTTATTG	NA	False	NA	3	True	ATTAAA	-15	NA	16237319	16269168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16237450_16237629_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.60	chr3	+	6672	4	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	3807	-503	intron_retention	FALSE	canonical	0	0	junction_2	122.565175405668	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16241206	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16243728_16257989_16259589_16264532_16264687_16268118
ES.21210.61	chr3	+	4138	4	ISM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	6240	483	6240	-483	3prime_fragment	FALSE	canonical	3	147	junction_2	157.928957305352	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGCTCAGTGTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	16243639	16270536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.62	chr3	+	4714	5	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	6275	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	177.33090537185	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16243674	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16243728_16257350_16257384_16257989_16258764_16258817_16259589_16268118
ES.21210.63	chr3	+	10654	3	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	12810	298	intron_retention	TRUE	non_canonical	0	0	junction_1	242	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATCTGCATTAGTTC	NA	False	NA	NA	False	AATACA	-16	NA	16250209	16269468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16251318_16251392_16259589_16268118
ES.21210.64	chr3	+	8562	2	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	16051	683	16027	-501	3prime_fragment	FALSE	canonical	3	484	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTATTGGTCCTGTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	16253426	16270518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_16259589_16268118
ES.21210.65	chr3	+	7116	2	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	18180	0	18156	0	3prime_fragment	FALSE	canonical	3	484	junction_1	0	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16255555	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_16259589_16268118
ES.21210.66	chr3	+	5610	3	ISM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	18371	503	18371	-503	3prime_fragment	FALSE	canonical	3	147	junction_1	168.5	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16255770	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_16257384_16257989_16259589_16268118
ES.21210.67	chr3	+	8291	2	NNC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	22076	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16259475	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_16264687_16268118
ES.21210.68	chr3	+	4424	1	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	28693	-503	mono-exon	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16266092	16270516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16266100_16270500
ES.21210.69	chr3	+	3081	1	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	30718	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGTGTTCTTTCCTTT	NA	False	NA	11	True	AATAAA	-13	NA	16268117	16271198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_16268100_16271200
ES.21210.7	chr3	+	4475	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	-55	682	-55	-500	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGGTCCTGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	16237320	16270519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ES.21210.8	chr3	+	4507	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	-78	500	-54	-500	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGGTCCTGTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	16237321	16270519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ES.21210.9	chr3	+	5304	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	-77	-2031	-53	0	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237322	16271201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ES.21211.1	chr3	-	6666	1	Intergenic	novelGene_17602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	958	False	NA	NA	False	NA	NA	NA	17788671	17782005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_17782000_17788700
ES.21211.2	chr3	-	2405	1	Intergenic	novelGene_17603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAAGTAACATATAAAGG	380	False	NA	NA	False	NA	NA	NA	17789249	17786844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_17786800_17789200
ES.21212.1	chr3	+	3008	1	FSM	ENSMUSG00000025128.8	ENSMUST00000026120.8	3344	1	331	5	331	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTATTTTGCTGTGCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	18108668	18111676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_18108700_18111700
ES.21213.1	chr3	-	1807	5	NIC	ENSMUSG00000039519.7	novel	2166	6	NA	NA	-15	-198	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.28490254498827	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTACTGAAATCCTCTAA	NA	False	NA	NA	False	AATAAA	-24	NA	18297517	18126311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_18126918_18150686_18150894_18151367_18151959_18157864_18158002_18297251
ES.21213.2	chr3	-	1664	5	NIC	ENSMUSG00000039519.7	novel	2166	6	NA	NA	-3	-329	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.28490254498827	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTCATGGCAAT	NA	False	NA	NA	False	AATAAA	-14	NA	18297505	18126442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_18126918_18150686_18150894_18151367_18151959_18157864_18158002_18297251
ES.21213.3	chr3	-	3913	4	ISM	ENSMUSG00000039519.7	ENSMUST00000035625.7	2166	6	-31	21877	-31	-21877	5prime_fragment	FALSE	canonical	2	12	junction_3	4.08248290463863	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTTGTCTTAGTCCA	NA	False	NA	NA	False	AATAAA	-40	NA	18297533	18147990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_18150894_18151367_18151959_18157864_18158002_18297251
ES.21214.1	chr3	-	4613	1	Antisense	novelGene_ENSMUSG00000104918.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTGGGTAGAATCACT	NA	False	NA	NA	False	NA	NA	NA	18680312	18675699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_18675700_18680300
ES.21214.2	chr3	-	3953	2	Antisense	novelGene_ENSMUSG00000104918.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAGTTTGTATCTGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	18687296	18676326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_18680214_18687230
ES.21215.1	chr3	-	2946	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-33	-742	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_1	91.40280204798	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATTGTATTTTTAAA	NA	False	NA	-6	True	AATAAA	-20	NA	19217262	19186307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.11	chr3	-	3076	3	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	27662	-750	intron_retention	FALSE	canonical	0	0	junction_1	131	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGCAGTTATTGTA	NA	False	NA	-14	True	AATAAA	-12	NA	19189567	19186315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19186810_19186896_19189082_19189170
ES.21215.12	chr3	-	3262	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-9	-752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.30785944614	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATCAAGCAGTTATTG	NA	False	NA	-16	True	AATAAA	-10	NA	19217238	19186317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203317_19203742_19211635_19211857_19217073
ES.21215.13	chr3	-	3074	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-9	-767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.162358553022	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGATAACAATGAAA	NA	False	NA	-31	True	AATATA	-10	NA	19217238	19186332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188547_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.14	chr3	-	1661	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-9	2021	-9	-2021	multi-exon	FALSE	canonical	3	251	junction_6	16.1761140780679	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCTACAAAAAGCTGTACA	NA	False	NA	NA	False	AAAAAG	-13	NA	19217238	19187586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.15	chr3	-	1300	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	21	2352	21	-2352	multi-exon	FALSE	canonical	3	251	junction_6	16.1761140780679	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGTGTAGCTTTATT	NA	False	NA	NA	False	AAAACA	-21	NA	19217208	19187917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.16	chr3	-	1175	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-14	2512	-14	-2512	multi-exon	FALSE	canonical	3	251	junction_6	16.1761140780679	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACTATGTATGCTGCA	NA	False	NA	NA	False	AATAAA	-24	NA	19217243	19188077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.17	chr3	-	174	1	Intergenic	novelGene_17604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTGGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	19199286	19199112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19199100_19199300
ES.21215.2	chr3	-	3037	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	-106	742	-106	-742	multi-exon	FALSE	canonical	3	251	junction_6	16.1761140780679	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATTGTATTTTTAAA	NA	False	NA	-6	True	AATAAA	-20	NA	19217335	19186307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.3	chr3	-	7630	2	NIC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	23203	-742	intron_retention	FALSE	canonical	3	262	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATTGTATTTTTAAA	NA	False	NA	-6	True	AATAAA	-20	NA	19194026	19186307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19189082_19189170
ES.21215.4	chr3	-	11924	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	7561	-746	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	133.358747577936	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19209668	19186311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19200246_19201013_19201098_19201567_19206519_19206799
ES.21215.5	chr3	-	2791	8	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	28	-746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.6968754111823	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19217201	19186311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19186969_19187076_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21215.6	chr3	-	3103	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	144	-746	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	103.065782661151	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19217085	19186311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19216753
ES.21215.7	chr3	-	2910	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	259	-746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.175199650503	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19216970	19186311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19216831
ES.21215.8	chr3	-	3067	8	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-14	-750	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	122.300399652258	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGCAGTTATTGTA	NA	False	NA	-14	True	AATAAA	-12	NA	19217243	19186315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19211947_19212078_19217073
ES.21215.9	chr3	-	1823	9	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	-12	-750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.039646756868	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGCAGTTATTGTA	NA	False	NA	-14	True	AATAAA	-12	NA	19217241	19186315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19186810_19186896_19186969_19187993_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ES.21216.1	chr3	+	2799	1	Intergenic	novelGene_17605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACTTAATCCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	19217466	19220265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19217500_19220300
ES.21216.2	chr3	+	1056	1	Intergenic	novelGene_17606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	19217475	19218531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19217500_19218500
ES.21216.3	chr3	+	211	1	Intergenic	novelGene_17607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAGTGAAACACCAGG	1807	False	NA	NA	False	NA	NA	NA	19219459	19219670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19219500_19219700
ES.21217.1	chr3	-	2295	1	Antisense	novelGene_ENSMUSG00000027601.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTATGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	19242195	19239900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_19239900_19242200
ES.21218.1	chr3	+	2958	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	-11	6	-11	-6	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTATTTGTATATT	NA	False	NA	44	True	AATAAA	-30	NA	19242262	19274975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.11	chr3	+	2677	7	NIC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-12	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	407.866808325136	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGACAATACTATTATCT	NA	False	NA	33	True	AATAAA	-19	NA	19242416	19274964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19242453_19254189_19254332_19260615_19260715_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.12	chr3	+	2837	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-12	-19	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	389.80685955368	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGACAATACTATTAT	NA	False	NA	31	True	AATAAA	-17	NA	19242416	19274962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269588_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.13	chr3	+	2683	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	396.527580943595	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTATCTATTTGTA	NA	False	NA	40	True	AATAAA	-26	NA	19242416	19274971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271460_19271588_19272325_19272486_19273201
ES.21218.15	chr3	+	6653	7	NIC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-11	-43	intron_retention	FALSE	canonical	3	831	junction_1	130.817196457075	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGTAAGCTGTTGA	NA	False	NA	7	True	TATAAA	-13	NA	19242417	19274938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.16	chr3	+	2590	9	NNC	ENSMUSG00000027601.14	novel	1574	9	NA	NA	-10	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	381.285797499723	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGTAAGCTGTTGA	NA	False	NA	7	True	TATAAA	-13	NA	19242418	19274938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201_19273292_19273466
ES.21218.17	chr3	+	3507	7	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	53	junction_4	399.165379260276	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTATCTATTTGTAT	NA	False	NA	41	True	AATAAA	-27	NA	19242421	19274972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269639_19269868_19271343_19271588_19272325
ES.21218.18	chr3	+	2643	7	NIC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	3	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	426.347536901789	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTATCTATTTGTA	NA	False	NA	40	True	AATAAA	-26	NA	19242431	19274971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19242453_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.19	chr3	+	2775	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	394.466314746123	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTATCTATTTGTATAT	NA	False	NA	43	True	AATAAA	-29	NA	19242432	19274974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265752_19269650_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.20	chr3	+	3426	9	NNC	ENSMUSG00000027601.14	novel	1574	9	NA	NA	12	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	480.320059309415	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGTAAGCTGTTGA	NA	False	NA	7	True	TATAAA	-13	NA	19242449	19274938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19243057_19253908_19253997_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.21	chr3	+	3366	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	18	-9	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTATCTATTTGTAT	NA	False	NA	41	True	AATAAA	-27	NA	19242455	19274972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.22	chr3	+	4444	6	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	-18	-21	intron_retention	FALSE	canonical	3	20	junction_1	466.037595050013	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGCCAGAATGTAT	NA	False	NA	-1	True	ATTAAA	-10	NA	19242459	19273862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19271588_19272325
ES.21218.23	chr3	+	1970	8	NIC	ENSMUSG00000027601.14	novel	904	4	NA	NA	121	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	397.600609780668	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGAGTCTCTGTGTT	NA	False	NA	4	True	CATAAA	-15	NA	19242598	19273719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.24	chr3	+	2944	8	NNC	ENSMUSG00000027601.14	novel	904	4	NA	NA	279	-8	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	556.266049986287	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTATCTATTTGTATA	NA	False	NA	42	True	AATAAA	-28	NA	19242756	19274973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631_19265748_19269639_19269868_19271460_19271588_19272325_19272486_19273201
ES.21218.25	chr3	+	1257	8	NNC	ENSMUSG00000027601.14	novel	764	2	NA	NA	11429	-160	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_1	377.342587805072	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTCCTTCCTTCTG	NA	False	NA	10	True	AGTAAA	-18	NA	19253906	19273374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19253997_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.26	chr3	+	2766	7	ISM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	11914	10	-11548	-10	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTATCTATTTGTA	NA	False	NA	40	True	AATAAA	-26	NA	19254187	19274971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.27	chr3	+	1676	7	ISM	ENSMUSG00000027601.14	ENSMUST00000117529.8	1896	8	12695	2	-11548	-2	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTTCTCATCAGTTTA	NA	False	NA	18	True	AATAAA	-13	NA	19254187	19273881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.28	chr3	+	1170	7	ISM	ENSMUSG00000027601.14	ENSMUST00000119865.8	1367	8	12677	159	-11548	-159	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTCCTTCCTTCTGA	NA	False	NA	11	True	AGTAAA	-19	NA	19254187	19273375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.3	chr3	+	1251	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	96	1606	-59	-159	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTCCTTCCTTCTGA	NA	False	NA	11	True	AGTAAA	-19	NA	19242369	19273375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.30	chr3	+	1514	7	ISM	ENSMUSG00000027601.14	ENSMUST00000117529.8	1896	8	12695	164	-11548	-1	3prime_fragment	FALSE	canonical	3	975	junction_4	80.6948986409096	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGAGTCTCTGTGTT	NA	False	NA	4	True	CATAAA	-15	NA	19254187	19273719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.4	chr3	+	1745	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	123	1085	-32	13	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAATAAGTGGCCCTATA	NA	False	NA	33	True	AATAAA	-28	NA	19242396	19273896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.5	chr3	+	5587	7	NIC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-21	-21	intron_retention	FALSE	canonical	3	831	junction_1	130.817196457075	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGCCAGAATGTAT	NA	False	NA	-1	True	ATTAAA	-10	NA	19242407	19273862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.6	chr3	+	2806	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	-20	-43	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	394.931407115882	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGTAAGCTGTTGA	NA	False	NA	7	True	TATAAA	-13	NA	19242408	19274938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265600_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.7	chr3	+	1558	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	136	1259	-19	2	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTCTCTGTGTTGCT	NA	False	NA	7	True	CATAAA	-18	NA	19242409	19273722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.8	chr3	+	2471	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	142	340	-13	-340	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAGACTATTGGTTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	19242415	19274641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ES.21218.9	chr3	+	1651	9	NNC	ENSMUSG00000027601.14	novel	1574	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	510.387842723551	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGAGTCTCTGTGTT	NA	False	NA	4	True	CATAAA	-15	NA	19242416	19273719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_19242453_19254189_19254332_19254758_19254867_19260615_19260715_19265631_19265748_19269639_19269868_19271343_19271588_19272325_19272486_19273201
ES.21219.1	chr3	+	2917	1	Intergenic	novelGene_17612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCCAGCCAGCCATG	NA	False	NA	NA	False	NA	NA	NA	19346635	19349552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19346600_19349600
ES.2122.1	chr1	+	176	1	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	183114203	183114379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183114200_183114400
ES.21220.1	chr3	+	3320	1	Intergenic	novelGene_17613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19355929	19359249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19355900_19359200
ES.21221.1	chr3	-	179	1	Intergenic	novelGene_17608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8004	False	NA	NA	False	NA	NA	NA	19257098	19256919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19256900_19257100
ES.21222.1	chr3	-	3238	1	Intergenic	novelGene_17609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGGCAAGCTGTCATC	NA	False	NA	NA	False	AATAAA	-38	NA	19269084	19265846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19265800_19269100
ES.21223.1	chr3	-	5006	1	Antisense	novelGene_ENSMUSG00000027601.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTCTGGGGAATAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	19276793	19271787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_19271800_19276800
ES.21223.10	chr3	-	6283	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.0414079614294	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365507	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19281970_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.11	chr3	-	6226	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.149725678399	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365528	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19287895_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.12	chr3	-	4840	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.334903051085	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365508	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19278356_19279835_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.13	chr3	-	4795	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.334903051085	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365484	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19278345_19279845_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.14	chr3	-	5951	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.9808390885476	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365460	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19280561_19280691_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.15	chr3	-	6141	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-424	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.2810127057073	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365910	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19287895_19287972_19290076_19290178_19290607_19290704_19295505_19295683_19297213_19297366_19310941_19311026_19314395_19314457_19365823
ES.21223.16	chr3	-	6147	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.0297312723361	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365487	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19310941_19311026_19314395_19314457_19365027
ES.21223.17	chr3	-	7327	10	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-22	0	intron_retention	FALSE	canonical	2	4	junction_8	49.3883577024303	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365508	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19314395_19314457_19365027
ES.21223.18	chr3	-	6185	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.334903051085	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365504	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19280561_19280691_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.19	chr3	-	6266	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	59.9430859542534	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCAAAGTCTACCTGT	NA	False	NA	NA	False	TATAAA	-20	NA	19365528	19277274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.2	chr3	-	179	1	Intergenic	novelGene_17610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAGCACTACGGGCT	NA	False	NA	NA	False	NA	NA	NA	19275456	19275277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19275300_19275500
ES.21223.20	chr3	-	6295	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-97	-3	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	35.7070264168999	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCAAAGTCTACCTGT	NA	False	NA	NA	False	TATAAA	-20	NA	19365583	19277274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.21	chr3	-	6003	10	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	-3	combination_of_known_splicesites	TRUE	canonical	3	15	junction_7	55.5797724996344	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCAAAGTCTACCTGT	NA	False	NA	NA	False	TATAAA	-20	NA	19365507	19277274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.26	chr3	-	6136	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	2	160	2	-160	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTCTTTAAGAGTGAGT	NA	False	NA	NA	False	AAAAAG	-10	NA	19365484	19277431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.27	chr3	-	5959	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-21	360	-21	-360	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTATGTCTAAGTTTT	NA	False	NA	NA	False	AGTAAA	-26	NA	19365507	19277631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.28	chr3	-	3796	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	2	-710	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCCAGTGTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	19365484	19279555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.29	chr3	-	3665	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-42	2675	-42	-1101	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGCAGTTGTGTTTG	NA	False	NA	NA	False	AAGAAA	-20	NA	19365528	19279946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.3	chr3	-	7094	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-21	-775	-21	775	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCTGCTGTGAGCATT	NA	False	NA	NA	False	TATAAA	-26	NA	19365507	19276496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.30	chr3	-	3625	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-241	2914	-241	-1340	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTACCACTCAGTCCTT	NA	False	NA	13	True	AATAAA	-35	NA	19365727	19280185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.31	chr3	-	3403	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-161	-1351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.334903051085	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCACTCTACCTTACC	NA	False	NA	2	True	AATAAA	-24	NA	19365647	19280196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19280561_19280691_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.32	chr3	-	3507	13	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	-1351	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.3465333595988	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCACTCTACCTTACC	NA	False	NA	2	True	AATAAA	-24	NA	19365507	19280196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295505_19295683_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.33	chr3	-	2979	10	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	25	1350	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	67.3401170033487	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCACTCTACCTTA	NA	False	NA	0	True	AATAAA	-22	NA	19365443	19280198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19281970_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.34	chr3	-	3361	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-206	1350	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCACTCTACCTTA	NA	False	NA	0	True	AATAAA	-22	NA	19365692	19280198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.35	chr3	-	3482	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-85	1350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5594647204927	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGCACTCTACCTTA	NA	False	NA	0	True	AATAAA	-22	NA	19365571	19280198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.37	chr3	-	3632	14	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-85	1349	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	62.9925326653694	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTTGCACTCTACCTT	NA	False	NA	-1	True	AATAAA	-21	NA	19365571	19280199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19295505_19295683_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.39	chr3	-	4702	11	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-216	1348	intron_retention	FALSE	canonical	2	7	junction_4	58.5675678170094	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTTGCACTCTACCT	NA	False	NA	-2	True	AATAAA	-20	NA	19365702	19280200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.4	chr3	-	6564	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-261	-5	-261	5	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTACCTGTCAGCTTAC	NA	False	NA	NA	False	TATAAA	-28	NA	19365747	19277266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.40	chr3	-	3412	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	41	1347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.0537480878734	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATCTTTGCACTCTACC	NA	False	NA	-3	True	AATAAA	-19	NA	19365427	19280201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283930_19284415_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19287895_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.41	chr3	-	5273	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-60	1346	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.6520441475022	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	19365546	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.42	chr3	-	3987	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-16	1346	intron_retention	FALSE	canonical	0	0	junction_2	46.8584998507684	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	19365502	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.44	chr3	-	3284	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-18	1346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.05520875972	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	19365504	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290667_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.45	chr3	-	3333	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-20	1346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.087338455888	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	19365506	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283905_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.46	chr3	-	5188	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-72	1346	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	37.2043008266517	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	NA	False	NA	-4	True	AATAAA	-18	NA	19365558	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.47	chr3	-	3041	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	6562	1346	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	67.20426491779	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATCTTTGCACTCTAC	4359	False	NA	-4	True	AATAAA	-18	NA	19307843	19280202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19307485_19307666_19307745
ES.21223.48	chr3	-	3172	11	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	1344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.8245839716019	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTAATCTTTGCACTCT	NA	False	NA	-6	True	AATAAA	-16	NA	19365507	19280204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19281970_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.49	chr3	-	3426	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-206	1344	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.4537114203385	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTAATCTTTGCACTCT	NA	False	NA	-6	True	AATAAA	-16	NA	19365692	19280204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.5	chr3	-	6280	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5594647204927	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTCTACCTGTCAGCT	NA	False	NA	NA	False	TATAAA	-25	NA	19365440	19277269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.50	chr3	-	3384	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-103	1344	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.228790184984	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTAATCTTTGCACTCT	NA	False	NA	-6	True	AATAAA	-16	NA	19365589	19280204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19314395_19314457_19365027
ES.21223.52	chr3	-	2970	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-402	1343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.4758403350679	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTAATCTTTGCACTC	NA	False	NA	-7	True	AATAAA	-15	NA	19365888	19280205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365823
ES.21223.54	chr3	-	6158	8	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-73	1343	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	52.1747456307422	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTAATCTTTGCACTC	NA	False	NA	-7	True	AATAAA	-15	NA	19365559	19280205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.55	chr3	-	2880	11	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	6540	1343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.3489201208954	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTAATCTTTGCACTC	4337	False	NA	-7	True	AATAAA	-15	NA	19307865	19280205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19307745
ES.21223.56	chr3	-	3501	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-21	1343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.4042504454516	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTAATCTTTGCACTC	NA	False	NA	-7	True	AATAAA	-15	NA	19365507	19280205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19298703_19298820_19310941_19311026_19314395_19314457_19365027
ES.21223.58	chr3	-	3296	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-86	1341	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.0297312723361	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTAATCTTTGCAC	NA	False	NA	-9	True	AATAAA	-13	NA	19365572	19280207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19310941_19311026_19314395_19314457_19365027
ES.21223.59	chr3	-	3309	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-73	1341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.2262428684423	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTAATCTTTGCAC	NA	False	NA	-9	True	AATAAA	-13	NA	19365559	19280207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19310941_19311026_19314395_19314457_19365027
ES.21223.60	chr3	-	8441	8	ISM	ENSMUSG00000069094.13	ENSMUST00000091314.11	4454	13	22568	1364	-5943	1339	intron_retention	FALSE	canonical	0	0	junction_2	55.7849368886752	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGGTTAATCTTTGC	NA	False	NA	-11	True	AATAAA	-11	NA	19296604	19280209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607
ES.21223.62	chr3	-	2383	9	NNC	ENSMUSG00000069094.13	novel	605	6	NA	NA	-893	1339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.0461112927992	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGGTTAATCTTTGC	1452	False	NA	-11	True	AATAAA	-11	NA	19288586	19280209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19280561_19280691_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19287895_19287972_19288517
ES.21223.63	chr3	-	3546	14	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-43	1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.0068489937759	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGGTTAATCTTTGC	NA	False	NA	-11	True	AATAAA	-11	NA	19365529	19280209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19308232_19308350_19310941_19311026_19314395_19314457_19365027
ES.21223.64	chr3	-	2777	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	-85	3606	-85	671	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGTACTAAAGTCCCT	NA	False	NA	NA	False	AATAAA	-28	NA	19365571	19280877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.65	chr3	-	2523	12	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	0	668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.4536656836567	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGGGTACTAAAGTC	NA	False	NA	NA	False	AATAAA	-25	NA	19365468	19280880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287835_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19310941_19311026_19314395_19314457_19365027
ES.21223.66	chr3	-	2801	13	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	1	668	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.3465333595988	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGGGTACTAAAGTC	NA	False	NA	NA	False	AATAAA	-25	NA	19365485	19280880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295505_19295683_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.67	chr3	-	2591	1	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	720	667	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATCAAGGGTACTAAAGT	6566	False	NA	NA	False	AATAAA	-24	NA	19283472	19280881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19280900_19283500
ES.21223.68	chr3	-	2475	10	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-101	666	combination_of_known_splicesites	FALSE	canonical	3	15	junction_7	55.5797724996344	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATCAAGGGTACTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	19365587	19280882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.69	chr3	-	2457	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	3	655	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTCCTTCAAATCAA	NA	False	NA	NA	False	AATAAA	-12	NA	19365483	19280893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.7	chr3	-	6168	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-85	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGTCTACCTGTCAGC	NA	False	NA	NA	False	TATAAA	-24	NA	19365571	19277270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
ES.21223.70	chr3	-	2649	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-10	654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.0414079614294	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTCCTTCAAATCA	NA	False	NA	NA	False	AATAAA	-11	NA	19365496	19280894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19281970_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ES.21223.71	chr3	-	6499	2	Intergenic	novelGene_17611	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5431	False	NA	NA	False	NA	NA	NA	19306771	19300227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19301568_19301612
ES.21223.8	chr3	-	5885	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.4758403350679	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365869	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365823
ES.21223.9	chr3	-	5295	1	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	1626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	7472	False	NA	NA	False	TATAAA	-23	NA	19282566	19277271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_19277300_19282600
ES.21224.1	chr3	-	7608	1	Genic_Genomic	ENSMUSG00000082766.2	novel	NA	NA	NA	NA	-7	-10709	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	19682848	19675240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_19675200_19682800
ES.21224.2	chr3	-	206	1	Intergenic	novelGene_17614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTCTGAAGCGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	19682194	19681988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19682000_19682200
ES.21225.1	chr3	+	175	1	Intergenic	novelGene_17615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19798641	19798816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19798600_19798800
ES.21226.1	chr3	+	3452	1	Intergenic	novelGene_17616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	19871677	19875129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19871700_19875100
ES.21227.1	chr3	-	179	1	Intergenic	novelGene_17617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	19908772	19908593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_19908600_19908800
ES.21228.1	chr3	+	176	1	Intergenic	novelGene_17618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAACCTCATTT	NA	False	NA	NA	False	NA	NA	NA	19946197	19946373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19946200_19946400
ES.21229.1	chr3	+	4108	1	FSM	ENSMUSG00000048106.7	ENSMUST00000198527.3	6148	1	-9	2049	-9	-2049	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTGGTCTATCGTGAG	NA	False	NA	NA	False	NA	NA	NA	19949040	19953148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19949000_19953100
ES.21229.2	chr3	+	1074	1	FSM	ENSMUSG00000048106.7	ENSMUST00000059704.6	1028	1	-102	56	-6	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATCTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	19949043	19950117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19949000_19950100
ES.21229.3	chr3	+	2327	1	FSM	ENSMUSG00000048106.7	ENSMUST00000059704.6	1028	1	-90	-1209	6	1209	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTGTGCTCAATGTA	NA	False	NA	NA	False	NA	NA	NA	19949055	19951382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19949100_19951400
ES.21229.4	chr3	+	6129	1	FSM	ENSMUSG00000048106.7	ENSMUST00000198527.3	6148	1	25	-6	25	6	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGGTGTCTGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	19949074	19955203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_19949100_19955200
ES.2123.1	chr1	-	4149	24	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-5699	213	intron_retention	FALSE	canonical	3	54	junction_21	32.1040958113431	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGAGTACAGTGTAGC	9306	False	NA	NA	False	NA	NA	NA	183138250	183107468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
ES.2123.10	chr1	-	3039	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126919	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.11	chr1	-	3931	24	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-5695	0	intron_retention	FALSE	non_canonical	0	0	junction_4	47.9280336370853	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	9310	False	NA	-1	True	CATAAA	-18	NA	183138246	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110848_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135482_183137604
ES.2123.12	chr1	-	3163	24	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	36.7126480319773	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126971	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.13	chr1	-	4671	22	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-6932	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	43.7351335285706	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	8073	False	NA	-1	True	CATAAA	-18	NA	183139483	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117381_183120065_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
ES.2123.14	chr1	-	6307	28	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	45.7086857240206	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4054	False	NA	-1	True	CATAAA	-18	NA	183150883	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119605_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.15	chr1	-	2900	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	35.1730416248418	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126918	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.16	chr1	-	2999	21	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	55	0	intron_retention	FALSE	canonical	0	0	junction_11	45.8240930079363	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126902	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115371_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.17	chr1	-	6390	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	49.3785874439436	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119605_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.19	chr1	-	6593	27	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_2	44.7594491032192	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.2	chr1	-	3127	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	44	1	intron_retention	FALSE	canonical	3	85	junction_21	21.5744242637648	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGTCTGCTGATTCTT	NA	False	NA	0	True	CATAAA	-19	NA	183126913	183107680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.20	chr1	-	4471	26	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-6296	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	47.6533146800933	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	8709	False	NA	-1	True	CATAAA	-18	NA	183138847	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120060_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
ES.2123.21	chr1	-	3115	23	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	361	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	34.5592376809864	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	NA	False	NA	-2	True	CATAAA	-17	NA	183126596	183107682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126228
ES.2123.22	chr1	-	6219	16	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	71	-1	intron_retention	FALSE	canonical	3	85	junction_15	19.7499929676499	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	NA	False	NA	-2	True	CATAAA	-17	NA	183126886	183107682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.23	chr1	-	6335	26	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	13	-1	intron_retention	FALSE	canonical	1	7	junction_2	45.1628165640718	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	4056	False	NA	-2	True	CATAAA	-17	NA	183150881	183107682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.24	chr1	-	6259	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.531372342012	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	4043	False	NA	-2	True	CATAAA	-17	NA	183150894	183107682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108394_183108463_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.25	chr1	-	6387	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-5523	-1	intron_retention	FALSE	canonical	3	54	junction_21	29.1324986799767	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGTCTGCTGATTC	9482	False	NA	-2	True	CATAAA	-17	NA	183138074	183107682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183135484_183137604
ES.2123.26	chr1	-	4868	24	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-6938	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	48.1735598794149	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTGTCTGCTGATT	8067	False	NA	-3	True	CATAAA	-16	NA	183139489	183107683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116558_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
ES.2123.27	chr1	-	6291	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.531372342012	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTGTCTGCTGATT	4029	False	NA	-3	True	CATAAA	-16	NA	183150908	183107683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183107958_183108008_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.28	chr1	-	3009	22	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	36.6620900050367	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCAGTGTCTGCTGA	NA	False	NA	-5	True	CATAAA	-14	NA	183126901	183107685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183125660_183125807_183126628
ES.2123.29	chr1	-	6091	27	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	1	-243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	47.1910381623485	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGATTGCTAAATGAT	4044	False	NA	6	True	AATAAA	-30	NA	183150893	183107924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120111_183125649_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.30	chr1	-	6186	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-27	-243	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	45.1999525916313	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGATTGCTAAATGAT	4016	False	NA	6	True	AATAAA	-30	NA	183150921	183107924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.31	chr1	-	3153	22	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	71	-250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	45.7210312483511	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATATGTAATGATTGCT	NA	False	NA	-1	True	AATAAA	-23	NA	183126886	183107931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120111_183125657_183125807_183126228
ES.2123.32	chr1	-	5941	27	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	-251	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	45.7709760494651	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATATGTAATGATTGC	4043	False	NA	-2	True	AATAAA	-22	NA	183150894	183107932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.33	chr1	-	6078	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	252	0	-252	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGCATATGTAATGATTG	4043	False	NA	-3	True	AATAAA	-21	NA	183150894	183107933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.34	chr1	-	2751	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	73	-253	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGCATATGTAATGATT	NA	False	NA	-4	True	AATAAA	-20	NA	183126884	183107934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.35	chr1	-	5576	24	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-7592	-253	intron_retention	FALSE	canonical	3	54	junction_21	32.1040958113431	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGCATATGTAATGATT	7413	False	NA	-4	True	AATAAA	-20	NA	183140143	183107934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604
ES.2123.36	chr1	-	2840	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	73	-257	intron_retention	FALSE	canonical	3	85	junction_21	21.5744242637648	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATGTAGCATATGTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	183126884	183107938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
ES.2123.37	chr1	-	213	1	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATAAAACC	NA	False	NA	NA	False	AATACA	-20	NA	183117785	183117572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_183117600_183117800
ES.2123.38	chr1	-	4212	7	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	17495	0	-2	5prime_fragment	FALSE	canonical	3	46	junction_6	8.7368949480541	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTAATGAGACAGTCT	4043	False	NA	NA	False	ATTAAA	-14	NA	183150894	183125176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.39	chr1	-	3766	7	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	-15	17956	-15	-463	5prime_fragment	FALSE	canonical	3	46	junction_6	8.7368949480541	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGGAGTATTTGGTAA	4028	False	NA	NA	False	ATTAAA	-24	NA	183150909	183125637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.4	chr1	-	6512	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	-182	0	-182	0	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	3861	False	NA	-1	True	CATAAA	-18	NA	183151076	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.40	chr1	-	4186	5	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	26749	0	-9256	5prime_fragment	FALSE	canonical	3	46	junction_4	9.75961064797157	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGTTTTGCTATCTAA	4043	False	NA	NA	False	AGTAAA	-15	NA	183150894	183134430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.41	chr1	-	1106	1	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	6969	-17645	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAAAAAAGTCTTTG	3631	False	NA	NA	False	NA	NA	NA	183143925	183142819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183142800_183143900
ES.2123.5	chr1	-	3190	3	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	15178	0	intron_retention	FALSE	canonical	3	153	junction_2	8.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183111779	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183110675_183110777_183110847_183111651
ES.2123.6	chr1	-	6417	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	45.1999525916313	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4028	False	NA	-1	True	CATAAA	-18	NA	183150909	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.7	chr1	-	7176	26	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	13	0	intron_retention	FALSE	canonical	3	46	junction_25	41.17230136876	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4056	False	NA	-1	True	CATAAA	-18	NA	183150881	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.8	chr1	-	6192	27	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	45.7709760494651	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.2123.9	chr1	-	6423	27	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_26	40.4892600267626	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ES.21230.1	chr3	+	211	1	Intergenic	novelGene_17619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	2341	False	NA	NA	False	NA	NA	NA	19959689	19959900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_19959700_19959900
ES.21231.1	chr3	+	179	1	Intergenic	novelGene_17620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCTAAG	NA	False	NA	NA	False	NA	NA	NA	20075845	20076024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_20075800_20076000
ES.21232.1	chr3	-	3586	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	22	-223	0	1	multi-exon	FALSE	canonical	2	2	junction_16	13.1101106021269	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCATGTGTCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	20089444	20050107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
ES.21232.10	chr3	-	3378	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	13	-6	5	3	multi-exon	FALSE	canonical	2	2	junction_16	13.1101106021269	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	20089453	20050324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
ES.21232.11	chr3	-	7441	13	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	5	3	intron_retention	FALSE	canonical	1	1	junction_7	14.516991959616	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	20089439	20050324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20070172_20072974_20073084_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.12	chr3	-	3679	16	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	0	3	intron_retention	FALSE	canonical	3	6	junction_3	13.8490272422129	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	20089466	20050324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.13	chr3	-	6020	15	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	-6	3	intron_retention	FALSE	canonical	3	37	junction_11	7.16994862361692	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATAATTTCCTATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	20089485	20050324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.14	chr3	-	3888	18	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	6	2	intron_retention	FALSE	canonical	0	0	junction_16	16.3852832947898	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATAATTTCCTATGT	NA	False	NA	NA	False	AATAAA	-23	NA	20089438	20050325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20086884_20087015_20089212
ES.21232.15	chr3	-	4784	15	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	19.7872614144988	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20089466	20050327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056582_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20068368_20069989_20070172_20072915_20073084_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.16	chr3	-	3965	18	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	18.2430723449016	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20089458	20050327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072915_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20086884_20087015_20089212
ES.21232.17	chr3	-	3581	17	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	119	0	intron_retention	FALSE	canonical	0	0	junction_10	17.6191257941477	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20089325	20050327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20074871_20074965_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.18	chr3	-	7928	2	NIC	ENSMUSG00000027615.15	novel	3385	17	NA	NA	3453	0	intron_retention	FALSE	canonical	3	44	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTCTAATAATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	20063641	20050330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20057596_20062978
ES.21232.20	chr3	-	5407	14	NIC	ENSMUSG00000027615.15	novel	3385	17	NA	NA	5	-14	intron_retention	FALSE	canonical	1	1	junction_8	19.5584392112126	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGATGTTCAAATCT	NA	False	NA	NA	False	AATAAA	-4	NA	20089439	20050344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056582_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20068368_20069989_20070172_20072974_20073084_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
ES.21232.21	chr3	-	6449	15	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	6	-14	intron_retention	FALSE	canonical	1	2	junction_7	12.9482880438036	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATGATGTTCAAATCT	NA	False	NA	NA	False	AATAAA	-4	NA	20089438	20050344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20070168_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.22	chr3	-	3233	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	41	742	6	-520	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTTGGTTTTTATT	NA	False	NA	NA	False	TATAAA	-15	NA	20089438	20050850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.23	chr3	-	3182	18	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	2	-521	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	16.5851060878318	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCTTTTGGTTTTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	20089456	20050851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077085_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20084722_20084970_20089212
ES.21232.24	chr3	-	3148	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	-6	874	-6	-652	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCATTGTAGCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	20089485	20050982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.25	chr3	-	3324	11	NNC	ENSMUSG00000027615.15	novel	3395	10	NA	NA	135	2	intron_retention	FALSE	canonical	0	0	junction_9	20.3135422809514	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTACTGAAAGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	20089309	20066684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20085747_20085824_20089212
ES.21232.26	chr3	-	2772	10	FSM	ENSMUSG00000027615.15	ENSMUST00000137408.8	3395	10	0	623	0	-623	multi-exon	FALSE	canonical	3	37	junction_6	8.31330927555995	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGGTATATCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	20089458	20067309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.3	chr3	-	4019	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	-5	2	-5	-2	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAGCATGTGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	20089484	20050110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.4	chr3	-	4161	18	NNC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_8	20.5662067025372	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAGCATGTGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	20089456	20050110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20068801_20069081_20069640_20069687_20069989_20070172_20072974_20073084_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.5	chr3	-	3074	8	NNC	ENSMUSG00000027615.15	novel	4076	16	NA	NA	-1086	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.507733422985	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTATGTTTATTTGT	NA	False	NA	NA	False	AATAAA	-31	NA	20069374	20050317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068191
ES.21232.6	chr3	-	3815	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	-9	210	-9	9	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCCTATGTTTATTTG	NA	False	NA	NA	False	AATAAA	-30	NA	20089488	20050318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.8	chr3	-	3385	15	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_6	13.7313881457107	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATAATTTCCTATGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	20089478	20050323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21232.9	chr3	-	4870	16	NIC	ENSMUSG00000027615.15	novel	4016	17	NA	NA	2	4	intron_retention	FALSE	canonical	3	37	junction_6	7.46368988280372	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATAATTTCCTATGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	20089456	20050323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ES.21233.1	chr3	+	3954	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6905	False	NA	16	True	AATAAA	-20	NA	20111941	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.12	chr3	+	4540	22	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-1	6	intron_retention	FALSE	canonical	0	0	junction_2	52.7000669084414	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTCTTTGGTGTCACT	6946	False	NA	8	True	AATAAA	-12	NA	20111982	20172646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.13	chr3	+	3912	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	9	1034	0	175	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTAGGTGTTTTGG	6947	False	NA	NA	False	AATAGA	-20	NA	20111983	20171620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.14	chr3	+	4438	21	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	-20	intron_retention	FALSE	canonical	0	0	junction_2	53.9808067742601	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6947	False	NA	-18	True	TTTAAA	-3	NA	20111983	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.15	chr3	+	4638	23	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	7	intron_retention	FALSE	canonical	1	1	junction_2	51.4288403508645	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6947	False	NA	9	True	AATAAA	-13	NA	20111983	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.16	chr3	+	4836	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	-20	intron_retention	FALSE	canonical	0	0	junction_5	50.7300204183343	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6948	False	NA	-18	True	TTTAAA	-3	NA	20111984	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.17	chr3	+	3489	23	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	69.1662866330958	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTCTTTGGTGTCACT	6948	False	NA	8	True	AATAAA	-12	NA	20111984	20172646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.18	chr3	+	3964	26	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.6790461912281	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6948	False	NA	9	True	AATAAA	-13	NA	20111984	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112232_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.19	chr3	+	5079	27	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	7	intron_retention	FALSE	canonical	0	0	junction_4	79.0278581695335	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6948	False	NA	9	True	AATAAA	-13	NA	20111984	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119330_20119371_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20169929_20170031_20170735
ES.21233.2	chr3	+	4968	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	-13	0	-13	0	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6925	False	NA	16	True	AATAAA	-20	NA	20111961	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.20	chr3	+	3512	23	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	57.3699931645671	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6948	False	NA	16	True	AATAAA	-20	NA	20111984	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.21	chr3	+	5025	26	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_23	62.0612600581071	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6951	False	NA	16	True	AATAAA	-20	NA	20111987	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20164097_20164181_20167519_20167601_20170735
ES.21233.22	chr3	+	3963	27	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	80.4603710019731	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6951	False	NA	-18	True	TTTAAA	-3	NA	20111987	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162501_20162634_20163468_20163650_20164484_20164555_20167519_20167601_20170735_20170908_20171941
ES.21233.24	chr3	+	7935	25	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	7	intron_retention	FALSE	non_canonical	0	0	junction_7	49.6999329308736	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6951	False	NA	9	True	AATAAA	-13	NA	20111987	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20124617_20124827_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.25	chr3	+	4145	27	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.0104119674033	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6951	False	NA	16	True	AATAAA	-20	NA	20111987	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20112451_20112689_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.26	chr3	+	7905	27	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	-20	intron_retention	TRUE	non_canonical	0	0	junction_7	85.2933070343276	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6951	False	NA	-18	True	TTTAAA	-3	NA	20111987	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20124617_20124827_20125784_20125853_20126629_20128992_20129060_20130654_20130749_20136918_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20164484_20164555_20167519_20167601_20170735
ES.21233.27	chr3	+	6145	23	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	4	0	intron_retention	FALSE	canonical	3	160	junction_10	28.6812058715796	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6951	False	NA	16	True	AATAAA	-20	NA	20111987	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.3	chr3	+	3785	25	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-11	-20	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	54.1259943454981	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6927	False	NA	-18	True	TTTAAA	-3	NA	20111963	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.31	chr3	+	1005	7	ISM	ENSMUSG00000002428.13	ENSMUST00000128127.8	3050	21	5	39416	5	5010	5prime_fragment	FALSE	canonical	3	170	junction_3	18.4842275106824	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACGACCGGAAAATGTTC	6952	False	NA	NA	False	AATACA	-21	NA	20111988	20123269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129
ES.21233.32	chr3	+	3572	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	-20	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	56.1399480033135	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6952	False	NA	-18	True	TTTAAA	-3	NA	20111988	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.33	chr3	+	3740	25	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	54.8140163542947	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6952	False	NA	16	True	AATAAA	-20	NA	20111988	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.34	chr3	+	3766	25	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	55.1550214295026	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6952	False	NA	9	True	AATAAA	-13	NA	20111988	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.35	chr3	+	4399	22	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	-423	intron_retention	FALSE	canonical	2	7	junction_19	51.3038611392988	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCTATACCTGAATCT	6952	False	NA	NA	False	AATACA	-16	NA	20111988	20171022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735
ES.21233.36	chr3	+	4765	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	5	intron_retention	FALSE	canonical	2	2	junction_2	50.1325652852454	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTTCTTTGGTGTCAC	6952	False	NA	7	True	AATAAA	-11	NA	20111988	20172645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.37	chr3	+	5110	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	0	intron_retention	FALSE	canonical	3	76	junction_23	38.6601204723141	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6952	False	NA	16	True	AATAAA	-20	NA	20111988	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.38	chr3	+	7199	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5	7	intron_retention	FALSE	canonical	3	160	junction_12	28.7277159467311	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6952	False	NA	9	True	AATAAA	-13	NA	20111988	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.39	chr3	+	3647	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	10	7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	68.1575790104046	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6957	False	NA	9	True	AATAAA	-13	NA	20111993	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.40	chr3	+	4767	26	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	11	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	62.1620334287739	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTCTTTGGTGTCACT	6958	False	NA	8	True	AATAAA	-12	NA	20111994	20172646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20171778_20171941
ES.21233.42	chr3	+	3860	26	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	12	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.2189044522296	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6959	False	NA	-18	True	TTTAAA	-3	NA	20111995	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119491_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.43	chr3	+	6014	22	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	15	7	intron_retention	FALSE	canonical	2	7	junction_19	51.3038611392988	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6962	False	NA	9	True	AATAAA	-13	NA	20111998	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735
ES.21233.44	chr3	+	3610	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	15	-273	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACTCATTTTAATTACA	6962	False	NA	NA	False	AATAAA	-16	NA	20111998	20172367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.45	chr3	+	4954	25	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-15	-20	intron_retention	FALSE	canonical	1	1	junction_1	49.3302363892798	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6965	False	NA	-18	True	TTTAAA	-3	NA	20112001	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112232_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.46	chr3	+	4755	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	28	172	-14	-158	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTAATAAAAAAAGTGAAT	6966	False	NA	NA	False	TTTAAA	-23	NA	20112002	20172482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.47	chr3	+	4106	25	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	62.531200545541	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	6975	False	NA	9	True	AATAAA	-13	NA	20112011	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171631
ES.21233.48	chr3	+	4672	23	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-1	5	intron_retention	FALSE	non_canonical	0	0	junction_2	76.176624361897	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTTCTTTGGTGTCAC	6979	False	NA	7	True	AATAAA	-11	NA	20112015	20172645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113275_20117991_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20129009_20129060_20130654_20130749_20136915_20136996_20137074_20137113_20145664_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.49	chr3	+	3688	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	60	1207	18	2	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCATTGTGTG	6998	False	NA	NA	False	NA	NA	NA	20112034	20171447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.5	chr3	+	4883	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_12	50.0424772309506	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6929	False	NA	16	True	AATAAA	-20	NA	20111965	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.50	chr3	+	3725	25	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	606	-1	combination_of_known_junctions	FALSE	canonical	3	76	junction_24	38.007103685437	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCACTTAGTGAC	8024	False	NA	15	True	AATAAA	-19	NA	20113060	20172653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
ES.21233.51	chr3	+	4631	24	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	740	7	intron_retention	FALSE	non_canonical	0	0	junction_6	64.089817646003	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTTTGGTGTCACTT	8158	False	NA	9	True	AATAAA	-13	NA	20113194	20172647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126522_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137911_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ES.21233.52	chr3	+	5755	22	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	777	6	intron_retention	FALSE	canonical	0	0	junction_19	52.6137252210167	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTCTTTGGTGTCACT	8195	False	NA	8	True	AATAAA	-12	NA	20113231	20172646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20113271_20117981_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163497_20163650_20167519_20167601_20170735
ES.21233.53	chr3	+	6035	20	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	5098	-20	intron_retention	FALSE	canonical	2	7	junction_17	53.4719746929392	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	NA	False	NA	-18	True	TTTAAA	-3	NA	20117552	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735
ES.21233.54	chr3	+	3571	3	ISM	ENSMUSG00000002428.13	ENSMUST00000128127.8	3050	21	45078	0	-5578	0	3prime_fragment	FALSE	canonical	3	234	junction_2	14	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20157061	20162685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_20159930_20160513_20160693_20162161
ES.21233.55	chr3	+	2759	3	NIC	ENSMUSG00000002428.13	novel	2573	4	NA	NA	242	5	intron_retention	FALSE	canonical	3	176	junction_2	15.5	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTTCTTTGGTGTCAC	NA	False	NA	7	True	AATAAA	-11	NA	20162881	20172645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20163650_20167519_20167601_20170735
ES.21233.56	chr3	+	4010	2	ISM	ENSMUSG00000002428.13	ENSMUST00000155635.2	2573	4	2870	0	2870	0	3prime_fragment	FALSE	canonical	3	176	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	NA	False	NA	16	True	AATAAA	-20	NA	20165509	20172654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_20167601_20170735
ES.21233.6	chr3	+	4200	26	NNC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	-3	-20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	48.1822207873402	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAATAAAAATCT	6935	False	NA	-18	True	TTTAAA	-3	NA	20111971	20172620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171631
ES.21233.7	chr3	+	4840	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	-2	intron_retention	FALSE	canonical	2	7	junction_21	49.3866348068233	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTCACTTAGTGA	6938	False	NA	14	True	AATAAA	-18	NA	20111974	20172652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20163468_20163650_20167519_20167601_20170735
ES.21234.1	chr3	-	2324	1	Antisense	novelGene_ENSMUSG00000002428.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGAAAAACCAAAAAACAAA	3955	False	NA	NA	False	NA	NA	NA	20118520	20116196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_20116200_20118500
ES.21235.1	chr3	-	206	1	Intergenic	novelGene_17621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGACCCAACAAAAACAT	2035	False	NA	NA	False	NA	NA	NA	20130479	20130273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_20130300_20130500
ES.21236.1	chr3	-	176	1	Intergenic	novelGene_17622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAGA	1044	False	NA	NA	False	NA	NA	NA	20131470	20131294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_20131300_20131500
ES.21237.1	chr3	-	1718	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	-18	-2	-18	-1	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTTGTTTAAGTACT	NA	False	NA	-3	True	AATAAA	-14	NA	20209278	20176248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
ES.21237.2	chr3	-	1583	4	ISM	ENSMUSG00000019528.19	ENSMUST00000184552.2	1662	8	6	27349	6	-26940	5prime_fragment	FALSE	canonical	3	51	junction_2	6.23609564462324	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCCTTGCAAAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	20209227	20203659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_20204866_20205116_20205292_20206893_20207030_20209161
ES.21238.1	chr3	-	170	1	Intergenic	novelGene_17623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGTGAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	20643409	20643239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_20643200_20643400
ES.21239.1	chr3	+	106	1	Intergenic	novelGene_17624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGAGGATCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	21104583	21104689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_21104600_21104700
ES.2124.1	chr1	+	1599	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	-36	821	-36	-821	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTAGTGGTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	183170288	183190199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.10	chr1	+	1816	12	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-5	-821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.7965218285384	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTAGTGGTTCATTTA	NA	False	NA	NA	False	NA	NA	NA	183170319	183190199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183186116_183186365_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.11	chr1	+	2345	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	21.1101871142821	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTAGTAGTATTTT	NA	False	NA	12	True	AATAAA	-23	NA	183170320	183191016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
ES.2124.12	chr1	+	2890	12	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-3	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	29.9266320488144	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTAGTAGTATTTT	NA	False	NA	12	True	AATAAA	-23	NA	183170321	183191016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172615_183172694_183173040_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.13	chr1	+	2633	12	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.7965218285384	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170327	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185646_183186116_183186365_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.14	chr1	+	2187	9	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	25.9313998850814	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170328	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183189427_183189583_183190053
ES.2124.15	chr1	+	2264	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	22.8624145706441	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170335	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
ES.2124.16	chr1	+	1440	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	13	-824	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	22.8624145706441	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAGTGTAGTGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	183170337	183190196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
ES.2124.17	chr1	+	2299	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170339	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.18	chr1	+	3692	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	30.3684046337637	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTAGTAGTATTTT	NA	False	NA	12	True	AATAAA	-23	NA	183170343	183191016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187688_183188968_183189251_183189583_183190053
ES.2124.19	chr1	+	3298	3	ISM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	16879	-1530	16879	1530	3prime_fragment	FALSE	canonical	3	59	junction_2	10	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGGGTTTTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	183187203	183192550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_183187850_183189427_183189583_183190053
ES.2124.2	chr1	+	4506	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-14	2215	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	22.8624145706441	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTAGTATACAAGGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	183170310	183193235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
ES.2124.20	chr1	+	2957	3	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	16982	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183187306	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183188968_183189251_183189583_183190053
ES.2124.21	chr1	+	5689	1	FSM	ENSMUSG00000104212.2	ENSMUST00000193285.2	383	1	-5309	3	-5309	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCATGGTCTTAATGT	NA	False	NA	NA	False	AATAAA	-29	NA	183190088	183195777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183190100_183195800
ES.2124.3	chr1	+	1605	12	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	-838	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.8077124659467	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACAGTTATCGCTACA	NA	False	NA	NA	False	AATACA	-40	NA	183170314	183190182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183177751_183177869_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.4	chr1	+	4413	9	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	59	junction_8	9.73396116696589	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170314	183191020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189583_183190053
ES.2124.5	chr1	+	3115	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	22.4786565434859	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTAGTAGTATTTT	NA	False	NA	12	True	AATAAA	-23	NA	183170314	183191016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183186365_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.6	chr1	+	4344	9	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	38	junction_1	15.1734760355035	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170315	183191020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189583_183190053
ES.2124.7	chr1	+	3441	9	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-9	-864	intron_retention	FALSE	canonical	3	10	junction_8	25.4460212999989	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTCACACCTAGATTT	NA	False	NA	NA	False	AATACA	-14	NA	183170315	183190156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189544_183190053
ES.2124.8	chr1	+	2391	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	-9	2	-9	-2	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170315	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.2124.9	chr1	+	3054	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9156852295727	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAGTAGTATTTTAT	NA	False	NA	14	True	AATAAA	-25	NA	183170316	183191018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183171163_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ES.21240.1	chr3	+	736	1	Intergenic	novelGene_17625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACTGAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	21107863	21108599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_21107900_21108600
ES.21241.1	chr3	+	178	1	Intergenic	novelGene_17626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	21655382	21655560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_21655400_21655600
ES.21242.1	chr3	+	158	1	Intergenic	novelGene_17627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	21820113	21820271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_21820100_21820300
ES.21243.1	chr3	+	155	1	Intergenic	novelGene_17628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	21976245	21976400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_21976200_21976400
ES.21244.1	chr3	-	135	1	Intergenic	novelGene_17629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACTGGCTGGTAGAAT	9635	False	NA	NA	False	ATTAAA	-16	NA	21978667	21978532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_21978500_21978700
ES.21245.1	chr3	-	159	1	Intergenic	novelGene_17630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	22057264	22057105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_22057100_22057300
ES.21246.1	chr3	-	3957	3	Genic_Genomic	ENSMUSG00000106019.2	novel	1731	1	NA	NA	-90	37208	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTATTGTTCAATTTAC	NA	False	NA	NA	False	TTTAAA	-1	NA	22130396	22091367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_22092993_22098348_22098417_22128132
ES.21246.2	chr3	-	3284	1	Intergenic	novelGene_17631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAACAGCTCCAAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	22124884	22121600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_22121600_22124900
ES.21246.3	chr3	-	1830	1	FSM	ENSMUSG00000106019.2	ENSMUST00000199072.2	1731	1	-98	-1	-98	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTTGTTGTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	22130404	22128574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_22128600_22130400
ES.21246.4	chr3	-	509	1	FSM	ENSMUSG00000106019.2	ENSMUST00000199072.2	1731	1	-33	1255	-33	-1255	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAAGTGTGCACCGCGGT	NA	False	NA	NA	False	AATAAA	-22	NA	22130339	22129830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_22129800_22130300
ES.21247.1	chr3	+	6868	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-100	-2559	-25	17	multi-exon	TRUE	canonical	3	160	junction_1	26.4420540469575	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACCTCTGATATCTCTG	NA	False	NA	34	True	AATAAA	-34	NA	22130790	22269474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.10	chr3	+	3071	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-79	1217	-4	-434	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTCTCAAAGTGTCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	22130811	22265698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.11	chr3	+	6851	16	NNC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.4782346309109	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130813	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245055_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.12	chr3	+	8205	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	1	12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.6481408776495	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGTTTCTTGGTTGTT	NA	False	NA	23	True	ATTAAA	-35	NA	22130816	22270770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22197167_22197235_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.13	chr3	+	3255	18	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	1	-436	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	79.6550521664517	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGCTTCTCAAAGTGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	22130816	22265696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22143576_22143687_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.14	chr3	+	6888	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.6481408776495	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130819	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22197167_22197235_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.15	chr3	+	4340	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.6481408776495	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	22130819	22266908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22197167_22197235_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.16	chr3	+	2832	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	60.2105355710278	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130819	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564_22265359_22269347
ES.21247.17	chr3	+	2396	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-68	1881	7	291	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGTTCTTGCTTCCAA	NA	False	NA	28	True	NA	NA	NA	22130822	22265034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.18	chr3	+	3231	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	8	-435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.0308432608542	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCTTCTCAAAGTGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	22130823	22265697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22239555_22239729_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.19	chr3	+	7124	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-67	-2848	8	306	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTCTTGCAGGGGATA	NA	False	NA	NA	False	ATTAAA	-15	NA	22130823	22269763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.2	chr3	+	4444	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	-19	3812	-19	31	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAACGTGCTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	22130796	22266946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.20	chr3	+	6962	18	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	83.7748258923121	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130826	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22157030_22157112_22197167_22197235_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.21	chr3	+	3139	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	11	-432	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTCAAAGTGTCCATC	NA	False	NA	NA	False	ATTAAA	-20	NA	22130826	22265700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.22	chr3	+	6641	14	NIC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.3171689741711	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGCTGTGTACATAT	NA	False	NA	15	True	AATAAA	-15	NA	22130828	22269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.23	chr3	+	6903	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	70.0775240358847	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130829	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22143576_22143668_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.24	chr3	+	7223	20	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.4793649171592	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130833	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22157030_22157112_22158249_22158308_22187250_22187423_22194598_22194703_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.25	chr3	+	4294	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-57	-28	18	28	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTAAACGTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	22130833	22266943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.26	chr3	+	7074	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	18	160	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	73.3279235694016	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCCCTACTACAACCTA	NA	False	NA	16	True	AATAAA	-17	NA	22130833	22269617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22143580_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.27	chr3	+	8216	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	18	3	18	-3	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGATGACAATTACTAA	NA	False	NA	8	True	ATTAAA	-20	NA	22130833	22270755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.28	chr3	+	7151	16	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	28	310	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.2369779078384	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGCAGGGGATAAGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	22130843	22269767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22143576_22143687_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.29	chr3	+	3918	16	ISM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	43	5063	-32	-437	intron_retention	FALSE	canonical	3	32	junction_2	69.1177417326566	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAGCTTCTCAAAGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	22130858	22265695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675
ES.21247.3	chr3	+	8242	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-15	19	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGGTTGTTGGGTTTG	NA	False	NA	30	True	ATTAAA	-42	NA	22130800	22270777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.30	chr3	+	6955	18	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.5035573870867	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGCTGTGTACATAT	NA	False	NA	15	True	AATAAA	-15	NA	22130858	22269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22156782_22156876_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.31	chr3	+	6863	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130859	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.32	chr3	+	2308	16	NNC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	-30	274	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	61.5114804099383	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTGCGGCAGTAG	NA	False	NA	11	True	NA	NA	NA	22130860	22265017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242562_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.33	chr3	+	6957	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-30	-2718	-30	176	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTGTCCTAGCTCTTA	NA	False	NA	32	True	AATAAA	-33	NA	22130860	22269633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.35	chr3	+	8218	18	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	84.2907310185416	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGATGACAATTACTAA	NA	False	NA	8	True	ATTAAA	-20	NA	22130860	22270755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22157030_22157112_22158249_22158308_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.36	chr3	+	6890	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	46	1301	-29	0	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130861	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.37	chr3	+	6659	15	NIC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.3335839594039	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGCTGTGTACATAT	NA	False	NA	15	True	AATAAA	-15	NA	22130877	22269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22203105_22203173_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.38	chr3	+	8044	16	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.4412747943142	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGACAATTACTAAT	NA	False	NA	9	True	ATTAAA	-21	NA	22130903	22270756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22143576_22143687_22203105_22203173_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.39	chr3	+	3077	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	99	5061	-5	-435	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCTTCTCAAAGTGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	22130914	22265697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.4	chr3	+	6807	16	NNC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	61.5114804099383	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130800	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242562_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.40	chr3	+	3058	15	ISM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	46	1892	17	280	intron_retention	FALSE	canonical	3	160	junction_1	27.3683304241249	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCGGCAGTAGTTGGTT	NA	False	NA	17	True	NA	NA	NA	22130936	22265023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675
ES.21247.41	chr3	+	6797	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.2399154843613	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGGCTGTGTACATA	NA	False	NA	14	True	AATAAA	-14	NA	22130946	22269454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22152160_22152266_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.42	chr3	+	9272	10	NIC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_2	71.3800470097289	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130946	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22203105_22203173_22242529_22242676_22243931_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.43	chr3	+	6806	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.8738713802646	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22131053	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22239509_22239729_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.44	chr3	+	2256	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	239	5742	10	273	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCTTGCGGCAGTA	NA	False	NA	10	True	NA	NA	NA	22131054	22265016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.45	chr3	+	8050	18	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	79.6550521664517	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGATGACAATTACTAAT	NA	False	NA	9	True	ATTAAA	-21	NA	22131081	22270756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22143576_22143687_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.46	chr3	+	2505	16	FSM	ENSMUSG00000027630.14	ENSMUST00000063988.14	6667	16	-278	4440	70	274	multi-exon	FALSE	canonical	1	3	junction_1	59.9696219394083	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTGCGGCAGTAG	NA	False	NA	11	True	NA	NA	NA	22131169	22265017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131592_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.47	chr3	+	6903	16	FSM	ENSMUSG00000027630.14	ENSMUST00000063988.14	6667	16	-237	1	111	-1	multi-exon	FALSE	canonical	1	3	junction_1	59.9696219394083	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22131210	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131592_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.48	chr3	+	6867	17	NIC	ENSMUSG00000027630.14	novel	6667	16	NA	NA	-91	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	73.1558428544843	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22131356	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131592_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.49	chr3	+	2908	16	FSM	ENSMUSG00000027630.14	ENSMUST00000063988.14	6667	16	-5	3764	-5	-439	multi-exon	FALSE	canonical	1	3	junction_1	59.9696219394083	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTAGCTTCTCAAAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	22131442	22265693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131592_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.5	chr3	+	6953	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1519953360117	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130800	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22218043_22218157_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.50	chr3	+	7998	17	NIC	ENSMUSG00000027630.14	novel	6667	16	NA	NA	28	-52	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	73.1558428544843	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCTTTATAATTTAAA	NA	False	NA	6	True	ATTAAA	-19	NA	22131475	22270706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131592_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.51	chr3	+	6720	17	NIC	ENSMUSG00000027630.14	novel	6667	16	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	71.8953232136834	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22131475	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131592_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.52	chr3	+	5216	1	NIC	ENSMUSG00000027630.14	novel	376	5	NA	NA	-15876	-84643	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGCTGCTGTAAGCAAA	NA	False	NA	NA	False	TTTAAA	-36	NA	22152776	22157992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22152800_22158000
ES.21247.53	chr3	+	6959	16	NNC	ENSMUSG00000027630.14	novel	4301	15	NA	NA	7578	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.6760432314288	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22176230	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22176668_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.54	chr3	+	1468	1	Intergenic	novelGene_17634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCTGCCTTTAGATACG	NA	False	NA	NA	False	NA	NA	NA	22195241	22196709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_22195200_22196700
ES.21247.55	chr3	+	7819	15	ISM	ENSMUSG00000027630.14	ENSMUST00000192328.5	3323	16	34451	-4619	-2	-7	3prime_fragment	FALSE	canonical	3	176	junction_4	20.6022834082209	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTACAGATGACAATTA	NA	False	NA	4	True	ATTAAA	-16	NA	22203103	22270751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.56	chr3	+	2524	16	NNC	ENSMUSG00000027630.14	novel	6667	16	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	60.6760432314288	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22203120	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564_22265359_22269341
ES.21247.57	chr3	+	6728	15	NNC	ENSMUSG00000027630.14	novel	354	4	NA	NA	5773	156	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.920661877494	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTCTTCCCTACTACAA	NA	False	NA	12	True	AATAAA	-13	NA	22208878	22269613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22208995_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.58	chr3	+	7800	15	NNC	ENSMUSG00000027630.14	novel	354	4	NA	NA	5786	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.4071964060661	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTACAGATGACAATTA	NA	False	NA	4	True	ATTAAA	-16	NA	22208891	22270751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22208942_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.59	chr3	+	6537	15	NNC	ENSMUSG00000027630.14	novel	354	4	NA	NA	5806	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.920661877494	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGCTGTGTACATAT	NA	False	NA	15	True	AATAAA	-15	NA	22208911	22269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22208995_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.6	chr3	+	6047	9	NNC	ENSMUSG00000027630.14	novel	4209	16	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.7907275001369	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGCTGTGTACATAT	NA	False	NA	15	True	AATAAA	-15	NA	22130800	22269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22257357_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.60	chr3	+	8333	15	NNC	ENSMUSG00000027630.14	novel	354	4	NA	NA	7864	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.4071964060661	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAATAAAAAT	326	False	NA	NA	False	NA	NA	NA	22210969	22266908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22215396_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.61	chr3	+	4194	15	NNC	ENSMUSG00000027630.14	novel	354	4	NA	NA	10793	-434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.4071964060661	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTCTCAAAGTGTCCA	2541	False	NA	NA	False	ATTAAA	-18	NA	22213898	22265698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22215396_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.63	chr3	+	5853	10	ISM	ENSMUSG00000027630.14	ENSMUST00000192328.5	3323	16	76901	-3325	-11802	0	3prime_fragment	FALSE	canonical	3	207	junction_7	15.2372188901444	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22245553	22269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.65	chr3	+	6590	2	ISM	ENSMUSG00000027630.14	ENSMUST00000201467.2	354	4	4727	-4716	4727	2	3prime_fragment	FALSE	canonical	3	224	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTGTGTACATATATAA	NA	False	NA	19	True	AATAAA	-19	NA	22262082	22269459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22263778_22264564
ES.21247.66	chr3	+	3555	1	ISM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	134622	1766	8082	-465	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTGCTATATATAAT	NA	False	NA	NA	False	AATACA	-26	NA	22265437	22268992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_22265400_22269000
ES.21247.7	chr3	+	2983	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-15	-437	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	60.2105355710278	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAGCTTCTCAAAGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	22130800	22265695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564_22265560_22265655
ES.21247.8	chr3	+	8156	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-89	-3858	-14	15	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTCTTGGTTGTTGGG	NA	False	NA	26	True	ATTAAA	-38	NA	22130801	22270773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21247.9	chr3	+	7024	18	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	79.6550521664517	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGCTGTGTACATATA	NA	False	NA	16	True	AATAAA	-16	NA	22130807	22269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_22131119_22143576_22143687_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ES.21248.1	chr3	-	6958	1	FSM	ENSMUSG00000103293.2	ENSMUST00000195073.2	622	1	-3368	-2968	-3368	2968	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCGGTTGCAAAGAGGA	NA	False	NA	NA	False	AATGAA	-43	NA	22138647	22131689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_22131700_22138600
ES.21249.1	chr3	-	158	1	Intergenic	novelGene_17632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	22140929	22140771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_22140800_22140900
ES.2125.1	chr1	-	4570	1	Antisense	novelGene_ENSMUSG00000072258.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTAGTGGGGGTTGG	9049	False	NA	NA	False	NA	NA	NA	183185551	183180981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_183181000_183185600
ES.21250.1	chr3	-	4850	1	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGGTGGTGGTGGCAG	NA	False	NA	NA	False	NA	NA	NA	22146407	22141557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_22141600_22146400
ES.21251.1	chr3	-	161	1	Intergenic	novelGene_17633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACACTCATGG	NA	False	NA	NA	False	NA	NA	NA	22155942	22155781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_22155800_22155900
ES.21252.1	chr3	-	5902	1	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCAGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	22196707	22190805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_22190800_22196700
ES.21253.1	chr3	-	8333	1	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTAAAATGCCCATG	NA	False	NA	NA	False	NA	NA	NA	22263210	22254877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_22254900_22263200
ES.21253.2	chr3	-	7731	2	Antisense	novelGene_ENSMUSG00000027630.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTAAAATGCCCATG	NA	False	NA	NA	False	NA	NA	NA	22263210	22254877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_22257387_22257988
ES.21254.1	chr3	+	177	1	Intergenic	novelGene_17635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTATTGAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	22369555	22369732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_22369600_22369700
ES.21255.1	chr3	+	160	1	Intergenic	novelGene_17636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	23080991	23081151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_23081000_23081200
ES.21256.1	chr3	-	174	1	Intergenic	novelGene_17637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAATGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	24217139	24216965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_24217000_24217100
ES.21257.1	chr3	+	545	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	-25	-76	-25	76	mono-exon	FALSE	NA	NA	NA	NA	NA	673	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387206	24387751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_24387200_24387800
ES.21257.2	chr3	+	443	2	Genic_Genomic	ENSMUSG00000057036.8	novel	444	1	NA	NA	-24	71	multi-exon	FALSE	non_canonical	0	0	junction_1	0	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTCATTTAGTACCT	NA	False	NA	NA	False	ATTAAA	-45	NA	24387207	24387746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_24387233_24387328
ES.21257.3	chr3	+	464	2	Genic_Genomic	ENSMUSG00000057036.8	novel	444	1	NA	NA	-23	73	multi-exon	FALSE	non_canonical	0	0	junction_1	0	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCATTTAGTACCTAT	NA	False	NA	NA	False	NA	NA	NA	24387208	24387748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_24387299_24387374
ES.21258.1	chr3	-	364	1	Intergenic	novelGene_17638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACAGGTT	NA	False	NA	NA	False	NA	NA	NA	24411311	24410947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_24410900_24411300
ES.21259.1	chr3	+	161	1	Intergenic	novelGene_17639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	24620535	24620696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_24620500_24620700
ES.2126.1	chr1	+	157	1	ISM	ENSMUSG00000104022.2	ENSMUST00000192860.2	916	2	1355	24	1355	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	183202940	183203097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_183202900_183203100
ES.21260.1	chr3	-	1982	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-127	-265	-127	265	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTGTGTTTCATGTG	NA	False	NA	NA	False	AATAAA	-34	NA	25266896	25264914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_25264900_25266900
ES.21260.2	chr3	-	1880	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-126	-164	-126	164	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAAGCTGTCCTCTGA	NA	False	NA	NA	False	TATAAA	-11	NA	25266895	25265015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_25265000_25266900
ES.21261.1	chr3	+	176	1	Intergenic	novelGene_17640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	25461261	25461437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_25461300_25461400
ES.21262.1	chr3	+	998	1	FSM	ENSMUSG00000104295.2	ENSMUST00000192273.2	454	1	400	-944	400	944	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAGACCACAGACTGAG	NA	False	NA	NA	False	NA	NA	NA	25785806	25786804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_25785800_25786800
ES.21263.1	chr3	+	4117	1	Intergenic	novelGene_17641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTGCTTCGCTCT	NA	False	NA	NA	False	NA	NA	NA	26403982	26408099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_26404000_26408100
ES.21264.1	chr3	-	220	1	Intergenic	novelGene_17642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAGAGAGAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	27130731	27130511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27130500_27130700
ES.21265.1	chr3	-	4427	1	Intergenic	novelGene_17643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAACCCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	27137936	27133509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27133500_27137900
ES.21266.1	chr3	-	4217	25	NNC	ENSMUSG00000027699.20	novel	2228	19	NA	NA	6	1562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	252.625491367932	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCATGTGTCCTTCT	1866	False	NA	NA	False	NA	NA	NA	27207971	27149808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27151147_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
ES.21266.10	chr3	-	4072	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	163.453272289735	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1839	False	NA	NA	False	AATAAA	-20	NA	27207998	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178067_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.101	chr3	-	5014	3	NIC	ENSMUSG00000027699.20	novel	683	6	NA	NA	-7	620	intron_retention	FALSE	canonical	3	272	junction_2	236.5	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGCCAAAAAAAAAAAAAAAA	1853	False	NA	NA	False	NA	NA	NA	27207984	27198478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27203222_27204177_27204330_27207865
ES.21266.11	chr3	-	4025	24	FSM	ENSMUSG00000027699.20	ENSMUST00000108298.9	4024	24	-1	0	-1	0	multi-exon	FALSE	canonical	3	28	junction_21	160.816383688852	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1809	False	NA	NA	False	AATAAA	-20	NA	27208028	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
ES.21266.12	chr3	-	4452	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	0	intron_retention	FALSE	canonical	3	581	junction_23	64.9968153938495	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1877	False	NA	NA	False	AATAAA	-20	NA	27207960	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.14	chr3	-	3966	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	187.499908002498	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1839	False	NA	NA	False	AATAAA	-20	NA	27207998	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.16	chr3	-	4131	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_24	156.17538218298	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1876	False	NA	NA	False	AATAAA	-20	NA	27207961	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
ES.21266.19	chr3	-	3864	24	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	214.523598448085	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1876	False	NA	NA	False	AATAAA	-20	NA	27207961	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155023_27169605_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
ES.21266.2	chr3	-	4562	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	6	501	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATTGTACATGTGCT	1866	False	NA	NA	False	TTTAAA	-18	NA	27207971	27150869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.21	chr3	-	3946	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	162.851153707577	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1876	False	NA	NA	False	AATAAA	-20	NA	27207961	27151370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27171961_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.22	chr3	-	3967	24	FSM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	18	0	-8	0	multi-exon	FALSE	canonical	3	28	junction_21	183.743194259469	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1852	False	NA	NA	False	AATAAA	-19	NA	27207985	27151371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207865
ES.21266.23	chr3	-	6527	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	253.276443036502	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1808	False	NA	NA	False	AATAAA	-19	NA	27208029	27151371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27155121_27156543_27156652_27169544_27169700_27170214_27170282_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192647_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.24	chr3	-	4067	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	163.06695966177	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1871	False	NA	NA	False	AATAAA	-19	NA	27207966	27151371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203049_27203141_27203222_27204177_27204330_27207851
ES.21266.25	chr3	-	4155	26	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	212.133542845067	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1839	False	NA	NA	False	AATAAA	-19	NA	27207998	27151371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27188380_27188449_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.28	chr3	-	6413	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-8	0	intron_retention	FALSE	canonical	3	581	junction_23	64.6178529410762	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1852	False	NA	NA	False	AATAAA	-19	NA	27207985	27151371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.3	chr3	-	3023	25	NNC	ENSMUSG00000027699.20	novel	2228	19	NA	NA	-7	440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.400653392227	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATTAGGAGAGTGTA	1853	False	NA	NA	False	GATAAA	-20	NA	27207984	27150930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27151147_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.33	chr3	-	3899	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	184.912578332868	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1868	False	NA	NA	False	AATAAA	-18	NA	27207969	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.34	chr3	-	4044	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	183.573096060458	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1853	False	NA	NA	False	AATAAA	-18	NA	27207984	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169558_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.35	chr3	-	4112	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	163.441375830398	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1811	False	NA	NA	False	AATAAA	-18	NA	27208026	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193272_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.37	chr3	-	6284	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	8	-1	intron_retention	FALSE	canonical	3	581	junction_23	64.8990200059413	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1868	False	NA	NA	False	AATAAA	-18	NA	27207969	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.38	chr3	-	6972	24	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	8	junction_15	165.012859669581	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1852	False	NA	NA	False	AATAAA	-18	NA	27207985	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.39	chr3	-	4144	26	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	250.523592501784	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1853	False	NA	NA	False	AATAAA	-18	NA	27207984	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27170214_27170282_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.4	chr3	-	4269	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	6	186	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTTATGTCTACGT	1844	False	NA	NA	False	TTTAAA	-1	NA	27207993	27151184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.40	chr3	-	3982	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	187.782915731047	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	1839	False	NA	NA	False	AATAAA	-18	NA	27207998	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.41	chr3	-	4577	18	NNC	ENSMUSG00000027699.20	novel	4024	24	NA	NA	4156	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	186.142595189668	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTATGTGTCCTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	27197194	27151372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193164_27193279_27193680_27193812_27195774
ES.21266.46	chr3	-	3920	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	161.417398036547	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1877	False	NA	NA	False	AATAAA	-17	NA	27207960	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155026_27156575_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.47	chr3	-	3904	24	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_20	165.049193560272	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1837	False	NA	NA	False	AATAAA	-17	NA	27208000	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.48	chr3	-	3931	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	184.60881596109	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1853	False	NA	NA	False	AATAAA	-17	NA	27207984	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201043_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.5	chr3	-	4138	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	-50	-2	-33	2	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTCCTGTCATAA	1777	False	NA	NA	False	AATAAA	-22	NA	27208060	27151368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.50	chr3	-	3925	24	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	218.638993438489	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1853	False	NA	NA	False	AATAAA	-17	NA	27207984	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193272_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.53	chr3	-	4098	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	163.244826147382	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1819	False	NA	NA	False	AATAAA	-17	NA	27208018	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192867_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.54	chr3	-	4045	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	184.527023013493	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1859	False	NA	NA	False	AATAAA	-17	NA	27207978	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176220_27176541_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.55	chr3	-	4057	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	163.06695966177	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1858	False	NA	NA	False	AATAAA	-17	NA	27207979	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203028_27203141_27203222_27204177_27204330_27207851
ES.21266.56	chr3	-	4080	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	162.488797690795	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1853	False	NA	NA	False	AATAAA	-17	NA	27207984	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200976_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.58	chr3	-	4077	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	255.347934607534	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1839	False	NA	NA	False	AATAAA	-17	NA	27207998	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192994_27193060_27193165_27193279_27193687_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.59	chr3	-	3967	24	NNC	ENSMUSG00000027699.20	novel	4024	24	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	218.614342218937	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1858	False	NA	NA	False	AATAAA	-17	NA	27207979	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204183_27204330_27207851
ES.21266.6	chr3	-	4143	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTCCTGTCATAA	1786	False	NA	NA	False	AATAAA	-22	NA	27208051	27151368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.60	chr3	-	3994	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	163.244826147382	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1871	False	NA	NA	False	AATAAA	-17	NA	27207966	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192815_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.61	chr3	-	3833	23	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	219.394098966123	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCTTTTATGTGTCCTGT	1877	False	NA	NA	False	AATAAA	-17	NA	27207960	27151373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
ES.21266.65	chr3	-	4070	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	229.112232171387	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCTTTTATGTGTCCT	1842	False	NA	NA	False	AATAAA	-15	NA	27207995	27151375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203134_27203219_27204177_27204330_27207865
ES.21266.66	chr3	-	3958	26	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.717165725651	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCTTTTATGTGTCCT	1877	False	NA	NA	False	AATAAA	-15	NA	27207960	27151375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27171961_27172044_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203219_27204177_27204330_27207851
ES.21266.67	chr3	-	4029	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	184.814617139266	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCTTTTATGTGTCCT	1877	False	NA	NA	False	AATAAA	-15	NA	27207960	27151375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193272_27193675_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.69	chr3	-	3983	24	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	165.546754085605	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTATCTTTTATGTGTC	1839	False	NA	NA	False	AATAAA	-13	NA	27207998	27151377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27184189_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.7	chr3	-	4054	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.598712839263	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTCCTGTCATAA	1853	False	NA	NA	False	AATAAA	-22	NA	27207984	27151368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155113_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.74	chr3	-	4052	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	183.683831623799	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1858	False	NA	NA	False	AATAAA	-8	NA	27207979	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200976_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.75	chr3	-	4021	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.417398036547	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1858	False	NA	NA	False	AATAAA	-8	NA	27207979	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155085_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.76	chr3	-	4067	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	162.564041867608	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1857	False	NA	NA	False	AATAAA	-8	NA	27207980	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169709_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.78	chr3	-	3957	25	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.027775681342	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1839	False	NA	NA	False	AATAAA	-8	NA	27207998	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27171961_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.80	chr3	-	4246	23	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-2980	-8	intron_retention	FALSE	canonical	3	664	junction_21	56.2791155134407	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	5507	False	NA	NA	False	AATAAA	-8	NA	27204330	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177
ES.21266.83	chr3	-	4259	26	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	251.567737200143	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1857	False	NA	NA	False	AATAAA	-8	NA	27207980	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192647_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27205449_27205568_27207771
ES.21266.84	chr3	-	3061	17	NNC	ENSMUSG00000027699.20	novel	4024	24	NA	NA	-2447	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	193.326058367076	785	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	468	False	NA	NA	False	AATAAA	-8	NA	27193732	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186045_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680
ES.21266.86	chr3	-	6172	23	NIC	ENSMUSG00000027699.20	novel	4024	24	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	28	junction_20	163.554101797772	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	1877	False	NA	NA	False	AATAAA	-8	NA	27207960	27151382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
ES.21266.87	chr3	-	6242	24	NNC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	-17	intron_retention	FALSE	canonical	1	1	junction_3	164.826207378989	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCTTTAAAATACAAGT	1877	False	NA	NA	False	TTTAAA	-32	NA	27207960	27151391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169558_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.88	chr3	-	3808	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	-14	292	3	-288	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAATCTGCCATTAT	1813	False	NA	NA	False	ATTAAA	-28	NA	27208024	27151662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.90	chr3	-	3811	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-8	-293	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTGAATCTGCC	1819	False	NA	NA	False	ATTAAA	-23	NA	27208018	27151667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.92	chr3	-	3573	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-7	-497	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTAGTTTTGACTA	1853	False	NA	NA	False	NA	NA	NA	27207984	27151871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.93	chr3	-	3272	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	-1	306	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGCTTGTTCAGTTCGA	1877	False	NA	NA	False	AATAAA	-18	NA	27207960	27152148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
ES.21266.94	chr3	-	3282	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	25	779	-8	305	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGGCTTGTTCAGTTCG	1852	False	NA	NA	False	AATAAA	-17	NA	27207985	27152149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.95	chr3	-	5057	3	NIC	ENSMUSG00000027699.20	novel	712	6	NA	NA	-1	655	intron_retention	FALSE	canonical	3	581	junction_2	82	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGATGTGAGGGGTGGT	1859	False	NA	NA	False	NA	NA	NA	27207978	27198443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27203222_27204177_27204330_27207851
ES.21266.96	chr3	-	2216	6	NNC	ENSMUSG00000027699.20	novel	712	6	NA	NA	2744	651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.010958698471	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTGATGTGAGGGG	4650	False	NA	NA	False	NA	NA	NA	27205187	27198447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27199204_27200100_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177
ES.21266.97	chr3	-	3240	6	NIC	ENSMUSG00000027699.20	novel	675	6	NA	NA	-1	651	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	273.910204264098	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTGATGTGAGGGG	1877	False	NA	NA	False	NA	NA	NA	27207960	27198447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27199209_27200104_27200195_27200985_27203037_27203141_27203219_27204177_27204330_27207851
ES.21266.98	chr3	-	3211	6	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	8	624	combination_of_known_junctions	FALSE	canonical	3	272	junction_5	188.891079725857	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1868	False	NA	NA	False	NA	NA	NA	27207969	27198474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27199209_27200104_27200195_27200985_27203037_27203141_27203222_27204177_27204330_27207865
ES.21266.99	chr3	-	5188	5	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	1521	624	combination_of_known_junctions	FALSE	canonical	3	664	junction_3	49.169985763675	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3427	False	NA	NA	False	NA	NA	NA	27206410	27198474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27199209_27200104_27200195_27200985_27203037_27203141_27203222_27204177
ES.21267.1	chr3	+	163	1	Intergenic	novelGene_17644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAGAAAGAAG	276	False	NA	NA	False	NA	NA	NA	27222571	27222734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_27222600_27222700
ES.21268.1	chr3	-	174	1	Intergenic	novelGene_17645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACCCT	7877	False	NA	NA	False	NA	NA	NA	27232693	27232519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27232500_27232700
ES.21269.1	chr3	+	4559	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	-74	-5	-74	5	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCCCTTCCCTTGCC	5494	False	NA	15	True	AATAAA	-22	NA	27237039	27299112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.10	chr3	+	4206	6	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	51.0975537574941	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCATGCCTCTGGCCCT	5606	False	NA	6	True	AATAAA	-13	NA	27237151	27299103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349_27296830_27297061
ES.21269.12	chr3	+	173	1	Intergenic	novelGene_17647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	27254694	27254867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_27254700_27254900
ES.21269.13	chr3	+	4712	5	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	33657	308	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.0630521172689	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGTGTCTGCCCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	27276246	27299415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27276422_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.14	chr3	+	4369	5	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	33687	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.0630521172689	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCATGCCTCTGGCCC	NA	False	NA	5	True	AATAAA	-12	NA	27276276	27299102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27276422_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.15	chr3	+	4475	4	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39454	3	33978	-3	3prime_fragment	FALSE	canonical	3	107	junction_2	11.5854314646552	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATGCCTCTGGCCCTT	NA	False	NA	7	True	AATAAA	-14	NA	27276567	27299104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.16	chr3	+	3760	1	NIC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	52758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	NA	False	NA	10	True	AATAAA	-17	NA	27295347	27299107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_27295300_27299100
ES.21269.17	chr3	+	2409	2	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	52760	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGCCTCTGGCCCTTC	NA	False	NA	8	True	AATAAA	-15	NA	27295349	27299105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27297650_27298996
ES.21269.2	chr3	+	4810	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	-18	-312	-18	312	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTGCCCATTTCAT	5550	False	NA	NA	False	AGTAAA	-18	NA	27237095	27299419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.3	chr3	+	2112	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	-7	2375	-7	-2375	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAATGGTCTGTTGTT	5561	False	NA	NA	False	AGTAAA	-6	NA	27237106	27296732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.4	chr3	+	4419	6	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	51.0975537574941	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	5568	False	NA	10	True	AATAAA	-17	NA	27237113	27299107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349_27295602_27295662
ES.21269.5	chr3	+	2762	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	1	1717	1	-1717	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGTTCCATTCTCAAG	5569	False	NA	NA	False	TATAAA	-26	NA	27237114	27297390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.6	chr3	+	4399	4	NIC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	62.4624331543013	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	5579	False	NA	10	True	AATAAA	-17	NA	27237124	27299107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_27237365_27276816_27277046_27293680_27293853_27295349
ES.21269.7	chr3	+	2529	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	36	1915	-3	-1915	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTAGTACGTCATGTTG	5604	False	NA	NA	False	ATTAAA	-16	NA	27237149	27297192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.21269.8	chr3	+	3576	6	NNC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.0975537574941	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATGCCTCTGGCCCTT	5604	False	NA	7	True	AATAAA	-14	NA	27237149	27299104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349_27297870_27298734
ES.21269.9	chr3	+	4511	6	NIC	ENSMUSG00000027698.15	novel	4480	5	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	60.3576010126314	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCATGCCTCTGGCCCTT	5605	False	NA	7	True	AATAAA	-14	NA	27237150	27299104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_27237365_27261528_27261600_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ES.2127.1	chr1	-	176	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	183304215	183304039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_183304000_183304200
ES.21270.1	chr3	-	2100	1	Intergenic	novelGene_17646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTCCTCCTTTGCAAGC	594	False	NA	NA	False	NA	NA	NA	27239976	27237876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27237900_27240000
ES.21271.1	chr3	-	178	1	Intergenic	novelGene_17648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTTGTTTTAAAAGC	1903	False	NA	-6	True	NA	NA	NA	27256819	27256641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27256600_27256800
ES.21272.1	chr3	-	174	1	Antisense	novelGene_ENSMUSG00000039304.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	27392078	27391904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_27391900_27392100
ES.21273.1	chr3	+	178	1	Intergenic	novelGene_17651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTGCTAT	NA	False	NA	NA	False	NA	NA	NA	27703894	27704072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_27703900_27704100
ES.21274.1	chr3	-	3520	1	Genic_Genomic	ENSMUSG00000039286.13	novel	NA	NA	NA	NA	294122	3405	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCAATCCCTACCTTA	NA	False	NA	NA	False	NA	NA	NA	27470425	27466905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_27466900_27470400
ES.21274.11	chr3	-	5271	8	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	250918	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	34.2171934344506	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGTTCTTCAGCCTT	NA	False	NA	-21	True	AATAAA	-22	NA	27513629	27470306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511126_27511250_27512865
ES.21274.12	chr3	-	6977	26	FSM	ENSMUSG00000039286.13	ENSMUST00000046157.10	6875	26	-98	-4	-98	4	multi-exon	FALSE	canonical	1	7	junction_25	20.0419559923676	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGTTCTTCAGCCTT	NA	False	NA	-21	True	AATAAA	-22	NA	27764686	27470306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
ES.21274.13	chr3	-	7016	28	NNC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	30.3333107221912	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGTTCTTCAGCCTT	NA	False	NA	-21	True	AATAAA	-22	NA	27764601	27470306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27726239_27726287_27736886_27736964_27764494
ES.21274.15	chr3	-	6866	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	55116	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	21.1692607334314	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGGGTTCTTCAGCCT	1865	False	NA	-22	True	AATAAA	-21	NA	27709431	27470307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27709349
ES.21274.19	chr3	-	6988	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	21.6574790776766	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27765482	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552978_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.2	chr3	-	4482	7	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253648	25	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	34.8456915876586	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGATTGCTTTTATTGT	NA	False	NA	0	True	AATAAA	-43	NA	27510899	27470285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27510822
ES.21274.20	chr3	-	6663	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_23	25.6582896173334	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27764600	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
ES.21274.21	chr3	-	7129	27	NNC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	53522	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	23.5033989736295	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	271	False	NA	-24	True	AATAAA	-19	NA	27711025	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592_27710671_27710756
ES.21274.22	chr3	-	7230	25	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53448	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	24.3839371080408	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	197	False	NA	-24	True	AATAAA	-19	NA	27711099	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
ES.21274.23	chr3	-	6984	27	FSM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	-97	-1	-56	1	multi-exon	FALSE	canonical	0	0	junction_26	26.4596656313991	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27764644	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886_27736964_27764519
ES.21274.24	chr3	-	7163	28	NNC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	30.3333107221912	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTAGGGTTCTTCAGC	NA	False	NA	-24	True	AATAAA	-19	NA	27765495	27470309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886_27736964_27737058_27737136_27765268
ES.21274.28	chr3	-	7959	25	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	44856	0	intron_retention	FALSE	canonical	0	0	junction_24	21.5921796542689	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27719691	27470310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27719568
ES.21274.29	chr3	-	8039	25	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-15	0	intron_retention	FALSE	canonical	3	63	junction_24	13.1275129869379	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27765471	27470310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.3	chr3	-	7324	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53418	6	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_25	16.7382675328123	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	167	False	NA	-19	True	AATAAA	-24	NA	27711129	27470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
ES.21274.30	chr3	-	6905	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	44854	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	21.1692607334314	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAGTAGGGTTCTTCA	NA	False	NA	-26	True	AATAAA	-17	NA	27719693	27470311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27719568
ES.21274.33	chr3	-	6881	25	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	32	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	21.5921796542689	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTAAGTAGGGTTCTTC	NA	False	NA	-27	True	AATAAA	-16	NA	27765424	27470312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.34	chr3	-	6901	27	NIC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_25	26.3393871152969	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTAAGTAGGGTTCTTC	NA	False	NA	-27	True	AATAAA	-16	NA	27764539	27470312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886_27736964_27764494
ES.21274.35	chr3	-	6846	24	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53522	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	28.6511512649854	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTAAGTAGGGTTCTTC	271	False	NA	-27	True	AATAAA	-16	NA	27711025	27470312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596183_27610268_27610346_27674753_27674830_27697099_27697239_27710592
ES.21274.36	chr3	-	3696	1	NIC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	290539	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTAAGTAGGGTTCTTC	NA	False	NA	-27	True	AATAAA	-16	NA	27474008	27470312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27470300_27474000
ES.21274.37	chr3	-	6871	26	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	21.1676734668692	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTAAGTAGGGTTCT	NA	False	NA	-29	True	AATAAA	-14	NA	27765425	27470314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514156_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.38	chr3	-	6628	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-14	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	21.3592017862368	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTTAAGTAGGGTTC	NA	False	NA	-30	True	AATAAA	-13	NA	27764561	27470315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27764494
ES.21274.39	chr3	-	5495	21	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	172333	576	172333	-576	3prime_fragment	FALSE	canonical	3	75	junction_20	11.2712022428843	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGTCTGTGCCCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	27592214	27470886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097
ES.21274.4	chr3	-	6858	24	NIC	ENSMUSG00000039286.13	novel	6886	27	NA	NA	-227	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	26.5942700311122	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	NA	False	NA	-19	True	AATAAA	-24	NA	27764815	27470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764519
ES.21274.40	chr3	-	5720	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-19	-1268	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTACCAGTGATTGAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	27765475	27471578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.41	chr3	-	3917	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-19	-3071	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCCCTTTTTACGCTG	NA	False	NA	NA	False	AATACA	-12	NA	27765475	27473381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.42	chr3	-	3331	3	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253674	-32303	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	48.5	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGTGTGTGGATCGTAG	NA	False	NA	NA	False	AGTAAA	-22	NA	27510873	27502613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27505744_27510597_27510748_27510822
ES.21274.43	chr3	-	3140	20	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-30	-34769	combination_of_known_splicesites	FALSE	canonical	2	13	junction_4	21.2674565743362	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTGCATCACTGTGTG	NA	False	NA	NA	False	AAAAAG	-44	NA	27765418	27505079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.44	chr3	-	3301	8	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	207859	48164	207859	30106	internal_fragment	FALSE	canonical	3	77	junction_6	11.2431384971149	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATTTCAACTTTCCAT	NA	False	NA	NA	False	AATAAA	-15	NA	27556688	27518474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542
ES.21274.45	chr3	-	2233	15	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53521	28712	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_14	19.755133665011	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTGTCAAGTGGGGT	270	False	NA	NA	False	ATTAAA	-20	NA	27711026	27519868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
ES.21274.46	chr3	-	1870	1	Intergenic	novelGene_17649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27538241	27536371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27536400_27538200
ES.21274.47	chr3	-	1503	1	Intergenic	novelGene_17650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27538478	27536975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27537000_27538500
ES.21274.48	chr3	-	4938	7	ISM	ENSMUSG00000039286.13	ENSMUST00000191684.2	5631	9	-17	10202	-17	-3199	5prime_fragment	FALSE	canonical	3	63	junction_6	16.7199149386459	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGTAGGATTTTACAG	NA	False	NA	NA	False	AATACA	-15	NA	27765473	27558782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.49	chr3	-	1480	3	ISM	ENSMUSG00000039286.13	ENSMUST00000193779.2	505	5	-71	118096	-3	-118096	5prime_fragment	FALSE	canonical	3	63	junction_2	13.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCTACTTTACTGTAAT	NA	False	NA	NA	False	AATACA	-25	NA	27765459	27673679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_27674830_27697099_27697239_27765268
ES.21274.5	chr3	-	7011	24	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53506	6	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	23.0471695156761	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	255	False	NA	-19	True	AATAAA	-24	NA	27711041	27470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
ES.21274.50	chr3	-	3317	1	Intergenic	novelGene_17652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTAGACCTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	27736314	27732997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27733000_27736300
ES.21274.6	chr3	-	6995	26	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-20	6	combination_of_known_junctions	FALSE	canonical	3	63	junction_25	12.8644626782466	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	NA	False	NA	-19	True	AATAAA	-24	NA	27765476	27470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.7	chr3	-	6796	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	-46	6	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	20.3423441147567	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTTCTTCAGCCTTGA	NA	False	NA	-19	True	AATAAA	-24	NA	27765502	27470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
ES.21274.8	chr3	-	4296	6	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253886	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.8685698306168	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGTTCTTCAGCCTT	NA	False	NA	-21	True	AATAAA	-22	NA	27510661	27470306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494314_27505458_27505744_27510597
ES.21275.1	chr3	-	165	1	Intergenic	novelGene_17653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAAGAGTTTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	27941447	27941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_27941300_27941400
ES.21276.1	chr3	+	2297	2	Intergenic	novelGene_17654	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	1910	False	NA	NA	False	NA	NA	NA	27986547	27989563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_27986654_27987372
ES.21277.1	chr3	+	4917	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	-68	0	-68	0	multi-exon	TRUE	canonical	1	4	junction_2	5.02258214078643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGTGAAATCATTTCAT	8138	False	NA	NA	False	AATAAA	-24	NA	27992775	28187388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.2	chr3	+	6223	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	-34	-1340	-34	1217	multi-exon	FALSE	canonical	1	4	junction_2	5.02258214078643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTCTCATCAATATG	8172	False	NA	NA	False	NA	NA	NA	27992809	28188728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.3	chr3	+	4854	27	NNC	ENSMUSG00000027695.17	novel	4849	27	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.66834874675093	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGCCAAGGATGGTGA	8182	False	NA	NA	False	AATAAA	-13	NA	27992819	28187377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_27992900_28006669_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.4	chr3	+	4722	26	NIC	ENSMUSG00000027695.17	novel	4849	27	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.47079518900132	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGTGAAATCATTTCAT	8183	False	NA	NA	False	AATAAA	-24	NA	27992820	28187388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_27992900_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.5	chr3	+	4957	28	NIC	ENSMUSG00000027695.17	novel	4849	27	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	6.00228580144678	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGCCAAGGATGGTGAA	8202	False	NA	NA	False	AATAAA	-14	NA	27992839	28187378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28133337_28133452_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.7	chr3	+	3471	16	NIC	ENSMUSG00000027695.17	novel	4239	22	NA	NA	6815	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	5.07017422448841	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCCAAGGATGGTGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	28102229	28187380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28184461_28184580_28185662
ES.21277.8	chr3	+	3711	18	NNC	ENSMUSG00000027695.17	novel	4239	22	NA	NA	6819	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.73985204113059	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGATGGTGAAATCATTT	NA	False	NA	NA	False	AATAAA	-21	NA	28102233	28187385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28102312_28103122_28103208_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ES.21277.9	chr3	+	5062	2	ISM	ENSMUSG00000027695.17	ENSMUST00000148827.8	4239	22	95822	134	17325	-6	3prime_fragment	FALSE	canonical	1	9	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGCCAAGGATGGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	28181232	28187377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_28184580_28185662
ES.21278.1	chr3	-	6607	1	Intergenic	novelGene_17655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTGTGGCAGCACATG	NA	False	NA	NA	False	NA	NA	NA	28022548	28015941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_28015900_28022500
ES.21279.1	chr3	-	228	1	Intergenic	novelGene_17656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTGGGTGTGATGG	NA	False	NA	NA	False	NA	NA	NA	28130082	28129854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_28129900_28130100
ES.2128.1	chr1	+	2665	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	51	76	51	-76	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTTGGTGTGTTTTTGT	NA	False	NA	NA	False	TTTAAA	-24	NA	183766628	183807757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ES.2128.2	chr1	+	1922	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	86	784	86	-784	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAAAATATTATAA	NA	False	NA	NA	False	NA	NA	NA	183766663	183807049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ES.2128.3	chr1	+	2386	4	NNC	ENSMUSG00000039384.9	novel	724	3	NA	NA	304	-758	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.58653778449403	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCAGTTTCCCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	183766881	183807075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_183767423_183768997_183769850_183801048_183801421_183806454
ES.2128.4	chr1	+	4492	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGACAGTTCA	NA	False	NA	NA	False	NA	NA	NA	183771752	183776244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183771800_183776200
ES.21280.1	chr3	-	180	1	Intergenic	novelGene_17657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCCCACTACAATC	NA	False	NA	NA	False	NA	NA	NA	28242346	28242166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_28242200_28242300
ES.21281.1	chr3	+	7083	32	FSM	ENSMUSG00000027692.17	ENSMUST00000159680.9	4380	32	-342	-2361	6	-1	multi-exon	FALSE	canonical	0	0	junction_2	5.51754367825169	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCCTTTTATATTTT	4062	False	NA	10	True	AATAAA	-20	NA	28317369	28724733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.10	chr3	+	3930	29	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.64821119861595	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGACTGACACTTGTA	NA	False	NA	NA	False	AAGAAA	-42	NA	28463586	28720094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828
ES.21281.11	chr3	+	6558	27	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_18	5.75138264827371	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGACTGACACTTGTA	NA	False	NA	NA	False	AAGAAA	-42	NA	28463606	28720094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28679347_28679372_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828
ES.21281.12	chr3	+	6702	33	NNC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.74066194357053	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCCTTTTATATTTT	NA	False	NA	10	True	AATAAA	-20	NA	28463617	28724733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28463699_28466634_28466673_28516916_28516962_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.13	chr3	+	6733	32	NNC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	42	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.22221189897233	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGGTAGTTTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	28463621	28724566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28608122_28608408_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.2	chr3	+	6956	31	FSM	ENSMUSG00000027692.17	ENSMUST00000159236.9	12276	31	47	5273	-14	0	multi-exon	FALSE	canonical	0	0	junction_2	5.59851170699261	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTTTTATATTTTT	4103	False	NA	11	True	AATAAA	-21	NA	28317410	28724734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.3	chr3	+	6856	31	NNC	ENSMUSG00000027692.17	novel	12276	31	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.33999649491666	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCCTTTTATATTTT	4105	False	NA	10	True	AATAAA	-20	NA	28317412	28724733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28650313_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675087_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.4	chr3	+	6857	32	FSM	ENSMUSG00000027692.17	ENSMUST00000159680.9	4380	32	-275	-2202	12	-160	multi-exon	FALSE	canonical	0	0	junction_2	5.51754367825169	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTTTGTGAATGTATTT	4129	False	NA	NA	False	AATAAA	-26	NA	28317436	28724574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.5	chr3	+	6410	30	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	-7	-168	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	4.87318367639435	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGGTAGTTTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	28463572	28724566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.6	chr3	+	6503	31	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	-7	-162	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.82171016226493	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGTTTGTGAATGTAT	NA	False	NA	NA	False	AATAAA	-24	NA	28463572	28724572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.7	chr3	+	6664	31	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.82171016226493	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTTTTATATTTTT	NA	False	NA	11	True	AATAAA	-21	NA	28463573	28724734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21281.8	chr3	+	3809	28	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.46770039408263	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGACTGACACTTGTA	NA	False	NA	NA	False	AAGAAA	-42	NA	28463581	28720094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828
ES.21281.9	chr3	+	6563	30	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	4.87318367639435	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCCTTTTATATTTT	NA	False	NA	10	True	AATAAA	-20	NA	28463586	28724733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ES.21282.1	chr3	-	4787	1	Intergenic	novelGene_17658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATGAAAACAGCTGAAT	NA	False	NA	NA	False	NA	NA	NA	28618076	28613289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_28613300_28618100
ES.21282.2	chr3	-	2198	1	Intergenic	novelGene_17659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCCAGAAAAACCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	28618076	28615878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_28615900_28618100
ES.21283.1	chr3	-	4945	1	Antisense	novelGene_ENSMUSG00000027692.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTCTACCTGATCTGT	NA	False	NA	NA	False	NA	NA	NA	28706202	28701257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_28701300_28706200
ES.21284.1	chr3	-	1850	1	FSM	ENSMUSG00000070522.5	ENSMUST00000094335.5	648	1	-19	-1183	-19	1183	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	28819528	28817678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_28817700_28819500
ES.21284.2	chr3	-	679	1	FSM	ENSMUSG00000070522.5	ENSMUST00000094335.5	648	1	455	-486	455	486	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATTTATGTATTTATGA	NA	False	NA	NA	False	AATAAA	-20	NA	28819054	28818375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_28818400_28819100
ES.21285.1	chr3	+	3621	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	-62	1468	-62	-1468	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTAAGTGTTTGGTT	NA	False	NA	14	True	AATAAA	-26	NA	28835362	28851527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ES.21285.2	chr3	+	5102	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	-60	-15	-60	15	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTTATGCTACAA	NA	False	NA	34	True	AATAAA	-37	NA	28835364	28853010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ES.21285.3	chr3	+	3477	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	-4	-1524	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.1206964784223	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGTAATACTGTAATAC	NA	False	NA	-42	True	AATATA	-16	NA	28835420	28851471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28835563_28836194_28836366_28836876_28836982_28847833_28847966_28848544
ES.21285.4	chr3	+	3519	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	-4	-1472	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	36.9281396769455	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATCTGGTAAGTGTTT	NA	False	NA	10	True	AATAAA	-22	NA	28835420	28851523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28835563_28836164_28836366_28836876_28836982_28847873_28847966_28848544
ES.21285.5	chr3	+	4969	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	36.9281396769455	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTATATGTGTATGT	NA	False	NA	10	True	AATAAA	-13	NA	28835433	28852986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28835563_28836164_28836366_28836876_28836982_28847873_28847966_28848544
ES.21285.6	chr3	+	858	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	43	4126	43	-4126	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTGAGCAAATCACT	NA	False	NA	NA	False	AGTAAA	-5	NA	28835467	28848869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ES.21285.7	chr3	+	4935	5	NNC	ENSMUSG00000050192.9	novel	5027	5	NA	NA	59	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.1206964784223	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGTTCTTAA	NA	False	NA	16	True	AATAAA	-19	NA	28835483	28852992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_28835563_28836194_28836366_28836876_28836982_28847833_28847966_28848544
ES.21285.8	chr3	+	1648	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	59	3320	59	-3320	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATTTTACTGCATTGT	NA	False	NA	NA	False	AATACA	-19	NA	28835483	28849675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ES.21286.1	chr3	+	1619	2	FSM	ENSMUSG00000039221.11	ENSMUST00000191691.2	590	2	-1028	-1	2	1	multi-exon	FALSE	canonical	3	7992	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTATGGTTCATC	NA	False	NA	12	True	AATAAA	-17	NA	28859619	28861566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28861008_28861335
ES.21286.2	chr3	+	508	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	10	7	10	1	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTATGGTTCATC	NA	False	NA	12	True	AATAAA	-17	NA	28859627	28861566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
ES.21286.5	chr3	+	546	4	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	450	junction_2	3086.0505864652	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTATGGTTCATC	NA	False	NA	12	True	AATAAA	-17	NA	28859656	28861566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28859693_28860651_28860742_28860818_28861008_28861335
ES.21286.6	chr3	+	624	3	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	1	intron_retention	FALSE	canonical	3	2038	junction_1	2977	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGTATGGTTCATC	NA	False	NA	12	True	AATAAA	-17	NA	28859658	28861566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_28859693_28860648_28861008_28861335
ES.21287.1	chr3	+	177	1	Intergenic	novelGene_17660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4731	False	NA	NA	False	NA	NA	NA	29158953	29159130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_29159000_29159100
ES.21288.1	chr3	+	177	1	Intergenic	novelGene_17661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATATTCAAGT	NA	False	NA	NA	False	NA	NA	NA	29820950	29821127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_29821000_29821100
ES.21289.1	chr3	-	3319	9	ISM	ENSMUSG00000027684.17	ENSMUST00000172694.8	4381	15	32858	3	17365	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0.330718913883074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTCCCCTGTGTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	30034447	30005447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30031407_30031496_30033749
ES.2129.1	chr1	+	176	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAACAAACAAAACCCCC	NA	False	NA	NA	False	NA	NA	NA	183820712	183820888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_183820700_183820900
ES.21290.1	chr3	+	3966	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	-563	1372	3	0	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8216	False	NA	NA	False	AATAAA	-35	NA	30656216	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.10	chr3	+	3218	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	-282	458	-276	-458	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTATAGTGTCCTTTCC	8503	False	NA	NA	False	ATTAAA	-26	NA	30656503	30672059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.11	chr3	+	2769	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	296	2490	-270	588	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGTAAATTTGTGTTCA	8509	False	NA	NA	False	AATGAA	-35	NA	30656509	30671532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.12	chr3	+	3885	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	298	1372	-268	0	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8511	False	NA	NA	False	AATAAA	-35	NA	30656511	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.13	chr3	+	3047	8	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	-259	-685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.2052384812137	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCTTCTAAATTTG	8520	False	NA	NA	False	AATAAA	-44	NA	30656520	30671832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666706_30667715_30667788_30670699
ES.21290.14	chr3	+	2911	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-272	835	-259	-702	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACATACTAGAAATCA	8520	False	NA	NA	False	AATAAA	-27	NA	30656520	30671815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.15	chr3	+	3512	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	-236	1499	-236	6	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGTATGTTAAATGA	8543	False	NA	NA	False	AATAAA	-26	NA	30656543	30672523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.16	chr3	+	4506	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	558	491	-8	-491	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTTAAATTCCATAG	8771	False	NA	NA	False	AATAAA	-18	NA	30656771	30673531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.17	chr3	+	2602	8	NNC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	-7	-683	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	72.8873886798768	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTTCTAAATTTGAT	8772	False	NA	NA	False	TATAAA	-17	NA	30656772	30671834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663218_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.18	chr3	+	3377	8	NNC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.0498016911444	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8772	False	NA	NA	False	AATAAA	-35	NA	30656772	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657703_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.19	chr3	+	2374	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-18	1118	-5	588	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGTAAATTTGTGTTCA	8774	False	NA	NA	False	AATGAA	-35	NA	30656774	30671532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.2	chr3	+	3344	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	23	2188	23	-683	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTTCTAAATTTGAT	8236	False	NA	NA	False	TATAAA	-17	NA	30656236	30671834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.20	chr3	+	3538	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	-11	-133	-5	0	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8774	False	NA	NA	False	AATAAA	-35	NA	30656774	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.21	chr3	+	4487	9	NNC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	-2	-491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.1413517751546	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTTAAATTCCATAG	8777	False	NA	NA	False	AATAAA	-18	NA	30656777	30673531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670325_30670443_30670699
ES.21290.22	chr3	+	2415	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	-2	2362	-2	716	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTTTTGGAATTTGAT	8777	False	NA	NA	False	AATAGA	-26	NA	30656777	30671660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.23	chr3	+	3537	8	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	66.0166954764676	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAGACTCAACCCTTT	8780	False	NA	NA	False	AATAAA	-32	NA	30656780	30672647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663218_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.24	chr3	+	3358	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-11	127	2	6	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGTATGTTAAATGA	8781	False	NA	NA	False	AATAAA	-26	NA	30656781	30672523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.25	chr3	+	4364	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-11	-879	2	-493	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCATGTTAAATTCCAT	8781	False	NA	NA	False	AATAAA	-16	NA	30656781	30673529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.26	chr3	+	3488	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	568	1499	2	6	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGTATGTTAAATGA	8781	False	NA	NA	False	AATAAA	-26	NA	30656781	30672523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.27	chr3	+	2890	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-9	593	-2	-460	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTATAGTGTCCTTT	8783	False	NA	NA	False	ATTAAA	-24	NA	30656783	30672057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.28	chr3	+	3178	7	NIC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	68.9951689129995	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGAAATCTGTGTGTA	8784	False	NA	NA	False	AATAAA	-16	NA	30656784	30672513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30656845_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.29	chr3	+	2617	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	571	2367	-1	711	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAGACAGTTTTGGAAT	8784	False	NA	NA	False	AATAGA	-21	NA	30656784	30671655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.3	chr3	+	5543	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	24	-12	24	12	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACTAACAATGAGAT	8237	False	NA	NA	False	AATAAA	-28	NA	30656237	30674034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.30	chr3	+	6539	6	NNC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	0	-453	intron_retention	FALSE	canonical	0	0	junction_2	78.0784221152041	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTGTCCTTTCCGTTCC	8785	False	NA	NA	False	ATTAAA	-31	NA	30656785	30672064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657703_30661185_30661980_30663133_30663294_30665589_30666702_30667700
ES.21290.31	chr3	+	4278	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	6	491	0	-491	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTTAAATTCCATAG	8785	False	NA	NA	False	AATAAA	-18	NA	30656785	30673531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.32	chr3	+	3438	6	NIC	ENSMUSG00000037730.14	novel	3394	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	78.6216255237705	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8787	False	NA	NA	False	AATAAA	-35	NA	30656787	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30670699
ES.21290.33	chr3	+	2300	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	574	2681	0	397	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACTTCGAAGTGTTTCT	8787	False	NA	NA	False	TTTAAA	-17	NA	30656787	30671341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.34	chr3	+	2905	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	575	2075	1	-570	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATACTTTTGGGTTA	8788	False	NA	NA	False	AATAAA	-27	NA	30656788	30671947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.35	chr3	+	4849	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-4	-1371	1	-1	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCACTCACTATTTTGA	8788	False	NA	NA	False	AATAAA	-15	NA	30656788	30674021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.36	chr3	+	3432	9	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	65.1266794409173	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8788	False	NA	NA	False	AATAAA	-35	NA	30656788	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657703_30657878_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.37	chr3	+	2539	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	9	2227	1	-722	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAATTTTCTAGATAT	8788	False	NA	NA	False	AATAAA	-7	NA	30656788	30671795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.38	chr3	+	2714	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	3	677	1	-677	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAATTTGATGTATTA	8788	False	NA	NA	False	TATAAA	-23	NA	30656788	30671840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.39	chr3	+	5456	6	NIC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	110	junction_2	36.6475101473483	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8788	False	NA	NA	False	AATAAA	-35	NA	30656788	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30667788_30670699
ES.21290.4	chr3	+	3785	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-311	0	268	0	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8481	False	NA	NA	False	AATAAA	-35	NA	30656481	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.40	chr3	+	2399	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	4	991	2	582	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACGTGTGTAAATTTG	8789	False	NA	NA	False	AATGAA	-29	NA	30656789	30671526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.41	chr3	+	2676	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	11	2088	-2	-583	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACTTCAATTATAAGCTA	8790	False	NA	NA	False	AATAAA	-14	NA	30656790	30671934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.42	chr3	+	4604	7	NIC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	110	junction_2	35.2262528363278	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8791	False	NA	NA	False	AATAAA	-35	NA	30656791	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30667788_30670699
ES.21290.43	chr3	+	3369	9	NNC	ENSMUSG00000037730.14	novel	3474	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.2408082388341	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8792	False	NA	NA	False	AATAAA	-35	NA	30656792	30672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656845_30657652_30657820_30661185_30661238_30661342_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.44	chr3	+	3783	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	579	1193	0	179	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGCTGTCATGATGT	8792	False	NA	NA	False	ATTAAA	-10	NA	30656792	30672829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.45	chr3	+	3841	8	NNC	ENSMUSG00000037730.14	novel	373	2	NA	NA	218	-11	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	64.6194511690385	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGAAATTAAGACTC	9010	False	NA	NA	False	AATAAA	-24	NA	30657010	30672639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30657311_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.46	chr3	+	3999	7	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	4607	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.4264786063373	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGACTAACAATGAGA	NA	False	NA	NA	False	AATAAA	-27	NA	30661399	30674033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699_30673327_30673751
ES.21290.47	chr3	+	3818	2	FSM	ENSMUSG00000037730.14	ENSMUST00000193736.2	373	2	-1872	-1573	-1872	0	multi-exon	FALSE	canonical	3	200	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	30665787	30672517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30667788_30670699
ES.21290.48	chr3	+	1402	1	Genic_Genomic	ENSMUSG00000037730.14	novel	NA	NA	NA	NA	5106	145	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGCTGCCTCAGACTC	NA	False	NA	NA	False	NA	NA	NA	30672765	30674167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_30672800_30674200
ES.21290.5	chr3	+	3070	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	-299	703	280	-570	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATACTTTTGGGTTA	8493	False	NA	NA	False	AATAAA	-27	NA	30656493	30671947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.6	chr3	+	4394	8	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	-283	-490	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	71.3776961676691	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTTAAATTCCATAGG	8496	False	NA	NA	False	AATAAA	-19	NA	30656496	30673532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656587_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.7	chr3	+	3433	8	NNC	ENSMUSG00000037730.14	novel	5555	8	NA	NA	-280	57	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	71.3776961676691	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGTTCAGCTAATCT	8499	False	NA	NA	False	AATAAA	-12	NA	30656499	30672574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30656587_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21290.8	chr3	+	4690	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	-284	-1012	-278	-493	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCATGTTAAATTCCAT	8501	False	NA	NA	False	AATAAA	-16	NA	30656501	30673529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ES.21290.9	chr3	+	3305	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	288	1962	-278	-457	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATAGTGTCCTTTCCG	8501	False	NA	NA	False	ATTAAA	-27	NA	30656501	30672060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ES.21291.1	chr3	-	3017	1	Antisense	novelGene_ENSMUSG00000037730.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGGTGTTTTGATCCTA	NA	False	NA	NA	False	AAAACA	-33	NA	30662765	30659748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_30659700_30662800
ES.21291.2	chr3	-	1586	1	Antisense	novelGene_ENSMUSG00000037730.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAGGAC	NA	False	NA	NA	False	NA	NA	NA	30662768	30661182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_30661200_30662800
ES.21291.3	chr3	-	2714	6	Antisense	novelGene_ENSMUSG00000037730.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAACAGGA	NA	False	NA	NA	False	NA	NA	NA	30672107	30661183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_30661979_30663133_30663292_30665587_30665767_30666615_30666704_30667701_30667785_30670696
ES.21292.1	chr3	+	201	1	Intergenic	novelGene_17662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCCTTAGATCCTCT	NA	False	NA	8	True	NA	NA	NA	30676588	30676789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_30676600_30676800
ES.21293.1	chr3	+	1407	1	Intergenic	novelGene_17663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATTCCACAGT	NA	False	NA	NA	False	AATAAA	-6	NA	30680997	30682404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_30681000_30682400
ES.21294.1	chr3	+	2410	4	NNC	ENSMUSG00000027703.17	novel	2092	6	NA	NA	83	-14781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.97614984548545	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTCTATTTAATTT	NA	False	NA	NA	False	NA	NA	NA	30702117	30711667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30702410_30704053_30705102_30709785_30709960_30710771
ES.21294.2	chr3	+	2869	7	Fusion	ENSMUSG00000086189.2_ENSMUSG00000027703.17	novel	2092	6	NA	NA	113	-3433	multi-exon	FALSE	non_canonical	0	0	junction_2	2.60874597374975	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTCTAATAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	30702147	30743082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_30702410_30704053_30705233_30709778_30709960_30714049_30714247_30740420_30740681_30741527_30741772_30742536
ES.21294.3	chr3	+	1978	5	NNC	ENSMUSG00000027703.17	novel	2092	6	NA	NA	115	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.2294017814916	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTGTGGGAAGAA	NA	False	NA	3	True	NA	NA	NA	30702149	30726578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30702410_30704053_30705102_30709785_30709960_30714039_30714247_30726289
ES.21294.4	chr3	+	2108	6	FSM	ENSMUSG00000027703.17	ENSMUST00000108265.3	2092	6	115	-131	115	-1	multi-exon	FALSE	canonical	3	7	junction_1	18.0177690072883	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTTGTGGGAAGAAT	NA	False	NA	4	True	NA	NA	NA	30702149	30726579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30702410_30704053_30705102_30709785_30709960_30713202_30713342_30714049_30714247_30726289
ES.21294.5	chr3	+	773	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10846	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTGTGGGAAGAATG	NA	False	NA	5	True	NA	NA	NA	30712880	30726580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30713166_30714049_30714247_30726289
ES.21294.6	chr3	+	4650	1	NIC	ENSMUSG00000086189.2	novel	4580	4	NA	NA	838	-794	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAGCACCCTGTAA	8721	False	NA	NA	False	NA	NA	NA	30741071	30745721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30741100_30745700
ES.21295.1	chr3	-	1915	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	-20	-4	-20	4	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGAGTTTAGATATCC	NA	False	NA	-14	True	AATAAA	-23	NA	30702038	30678411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ES.21295.10	chr3	-	3080	6	ISM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	9474	244	9474	-244	3prime_fragment	FALSE	canonical	3	354	junction_3	24.7822517136761	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATAGTAGTTCTTTT	7319	False	NA	NA	False	ACTAAA	-24	NA	30692544	30678659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390
ES.21295.11	chr3	-	1573	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	72	246	72	-246	multi-exon	FALSE	canonical	3	297	junction_6	40.0710618776194	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTATAGTAGTTCTT	NA	False	NA	NA	False	ACTAAA	-22	NA	30701946	30678661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ES.21295.12	chr3	-	731	4	ISM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	52	18742	52	-18742	5prime_fragment	FALSE	canonical	3	353	junction_2	40.185680147148	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTCTTTTCCTTTCA	NA	False	NA	NA	False	ATTAAA	-41	NA	30701966	30697157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30697498_30697596_30697719_30699343_30699465_30701818
ES.21295.13	chr3	-	2840	1	NIC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	57	-20706	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGTAAAATGGACATAG	NA	False	NA	NA	False	NA	NA	NA	30701961	30699121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30699100_30702000
ES.21295.3	chr3	-	1807	11	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	118.182232167107	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGTCTTGAGTTTAG	NA	False	NA	-20	True	AATAAA	-17	NA	30701964	30678417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696917_30697405_30697498_30697596_30697719_30699343_30699465_30701818
ES.21295.4	chr3	-	1821	11	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	66	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	153.982499005569	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGTCTTGAGTTTAG	NA	False	NA	-20	True	AATAAA	-17	NA	30701952	30678417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30679052_30684121_30684249_30685426_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699459_30701818
ES.21295.5	chr3	-	2262	11	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	-2867	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	115.146689053572	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGTCTTGAGTTTAG	NA	False	NA	-20	True	AATAAA	-17	NA	30704885	30678417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30704312
ES.21295.6	chr3	-	1492	9	NIC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	112	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	130.931279685184	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGACTGTCTTGAGTTT	NA	False	NA	-22	True	AATAAA	-15	NA	30701906	30678419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30679052_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ES.21295.7	chr3	-	2336	12	NNC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	-2788	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	143.840074187094	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGACTGTCTTGAGTTT	NA	False	NA	-22	True	AATAAA	-15	NA	30704806	30678419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30702239_30702593_30704510
ES.21295.8	chr3	-	1691	10	NIC	ENSMUSG00000027702.8	novel	1891	11	NA	NA	112	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	122.547043121316	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGACTGTCTTGAGTTT	NA	False	NA	-22	True	AATAAA	-15	NA	30701906	30678419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ES.21296.10	chr3	-	4472	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-57	2834	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	17.8815547422477	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	-12	True	AATAAA	-29	NA	30754049	30730372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749762_30753847
ES.21296.11	chr3	-	4499	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-80	-2833	-67	2833	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGAGTTTGTTTTCTT	NA	False	NA	-13	True	AATAAA	-28	NA	30754059	30730373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.12	chr3	-	4568	10	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-59	2818	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.7555954517931	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCTACCAGTATATT	NA	False	NA	-28	True	AATAAA	-13	NA	30754051	30730388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30738369_30738462_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.13	chr3	-	4203	8	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	3	2740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.1608222053318	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGACATTATTATT	NA	False	NA	50	True	NA	NA	NA	30753976	30730466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30753847
ES.21296.14	chr3	-	4310	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-34	-2690	-21	2690	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTGGTCTTGGTGT	NA	False	NA	0	True	NA	NA	NA	30754013	30730516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.15	chr3	-	4332	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-21	2688	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	17.8985858379929	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGCCTTGGTCTTGGT	NA	False	NA	-2	True	NA	NA	NA	30754013	30730518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30749635_30749780_30753847
ES.21296.16	chr3	-	7734	6	NIC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	5938	149	intron_retention	FALSE	canonical	3	51	junction_5	7.92464510246358	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCATGATACCTTT	NA	False	NA	-5	True	NA	NA	NA	30747979	30733057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30733533_30735094_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305
ES.21296.17	chr3	-	1694	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	1	147	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	17.8985858379929	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGGCTCATGATACCT	NA	False	NA	-7	True	NA	NA	NA	30753916	30733059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30749635_30749780_30753847
ES.21296.18	chr3	-	5462	8	NIC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-4	147	intron_retention	FALSE	canonical	3	40	junction_6	9.99183340002612	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGGCTCATGATACCT	NA	False	NA	-7	True	NA	NA	NA	30753963	30733059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30733533_30735094_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.19	chr3	-	3301	8	NIC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	1	147	intron_retention	FALSE	canonical	3	40	junction_6	7.94110977696417	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGGCTCATGATACCT	NA	False	NA	-7	True	NA	NA	NA	30753991	30733059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.20	chr3	-	1592	8	NIC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-5	145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	22.1608222053318	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCAAGGCTCATGATAC	NA	False	NA	-9	True	NA	NA	NA	30753984	30733061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30753847
ES.21296.21	chr3	-	1500	8	NIC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	1	145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	22.6742684331731	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCAAGGCTCATGATAC	NA	False	NA	-9	True	NA	NA	NA	30753916	30733061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30733533_30735094_30735263_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.22	chr3	-	2742	8	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-21	-437	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	20.2816897416243	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTTATTATCAAT	NA	False	NA	NA	False	AATAAA	-11	NA	30754013	30733643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30735260_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.23	chr3	-	15302	3	NIC	ENSMUSG00000074653.11	novel	3284	7	NA	NA	121	16	intron_retention	FALSE	canonical	3	51	junction_2	8	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGATCTAATTCATGC	NA	False	NA	NA	False	NA	NA	NA	30753796	30736812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30743456_30743998_30744167_30745305
ES.21296.24	chr3	-	4870	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	-67	-2981	-5	2981	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTAATTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	30753984	30749114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30749100_30754000
ES.21296.25	chr3	-	2838	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	-32	-2101	1	1926	multi-exon	FALSE	canonical	3	18	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGCCACCATTATGT	NA	False	NA	NA	False	TTTAAA	-17	NA	30753991	30750169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30752864_30753847
ES.21296.26	chr3	-	2145	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	28	-1468	-14	1293	multi-exon	FALSE	canonical	3	18	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGAGTTGGCTGGGT	NA	False	NA	NA	False	ACTAAA	-20	NA	30753931	30750802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30752864_30753847
ES.21296.27	chr3	-	2712	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	-67	-823	-5	823	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	30753984	30751272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30751300_30754000
ES.21296.28	chr3	-	767	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	-60	-2	-27	2	multi-exon	FALSE	canonical	3	18	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCCTTCAGTTTGTA	NA	False	NA	-5	True	AGTAAA	-22	NA	30754019	30752268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30752864_30753847
ES.21296.29	chr3	-	520	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	-68	1370	-6	-1195	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGGAGGGAGACCAGGA	NA	False	NA	NA	False	AAGAAA	-3	NA	30753985	30753465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30753500_30754000
ES.21296.3	chr3	-	4555	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	9	2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.0071864670938	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGCTTTTTTTCTTGT	NA	False	NA	0	True	AATAAA	-15	NA	30753908	30730243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741758_30743287_30743456_30743998_30744167_30745305_30745501_30749635_30749780_30753847
ES.21296.6	chr3	-	4853	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	-305	-2962	-292	2962	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGCTTTTTTTCTTG	NA	False	NA	-1	True	AATAAA	-14	NA	30754284	30730244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ES.21296.7	chr3	-	6605	2	ISM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	15440	-2834	15378	2834	3prime_fragment	FALSE	canonical	3	56	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	-12	True	AATAAA	-29	NA	30738539	30730372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30733533_30735094
ES.21296.8	chr3	-	4481	9	NNC	ENSMUSG00000074653.11	novel	1586	9	NA	NA	-24	2834	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	17.8985858379929	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	-12	True	AATAAA	-29	NA	30754016	30730372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745474_30749635_30749780_30753847
ES.21296.9	chr3	-	4668	1	Genic_Genomic	ENSMUSG00000074653.11	novel	NA	NA	NA	NA	18877	2834	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTTTTCTTT	NA	False	NA	-12	True	AATAAA	-29	NA	30735040	30730372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_30730400_30735000
ES.21297.1	chr3	+	2244	4	ISM	ENSMUSG00000051860.14	ENSMUST00000172593.2	1511	8	5611	-1672	434	1	3prime_fragment	FALSE	canonical	2	5	junction_3	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTCAGGCTCTTC	966	False	NA	NA	False	ATTAAA	-10	NA	30810804	30821316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30810898_30812474_30812594_30816287_30816399_30819395
ES.21298.1	chr3	+	174	1	Intergenic	novelGene_17664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTAAGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	30831463	30831637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_30831500_30831600
ES.21299.1	chr3	+	3990	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGCAGTAGTGATGGATT	NA	False	NA	NA	False	AATAAA	-21	NA	30847000	30875412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.21299.10	chr3	+	2892	10	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-11	30511	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	287.983324277168	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGGAGTCGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	30847473	30905923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724_30875413_30905909
ES.21299.11	chr3	+	2719	10	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	297.379210876834	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACGCAGTAGTGATGGA	NA	False	NA	NA	False	AATAAA	-19	NA	30847475	30875410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709_30874505_30874674
ES.21299.12	chr3	+	1355	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-9	-290	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTACTTATTATTTAG	NA	False	NA	10	True	AATAAA	-13	NA	30847475	30873891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
ES.21299.14	chr3	+	4193	7	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-8	33	intron_retention	FALSE	canonical	3	556	junction_4	95.1402473544539	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGGATATAAAAG	NA	False	NA	-18	True	NA	NA	NA	30847476	30874214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30868503_30872648
ES.21299.16	chr3	+	8363	6	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	453	1174	-8	57	intron_retention	FALSE	canonical	3	556	junction_4	102.169662816317	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847476	30874238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444
ES.21299.18	chr3	+	1365	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-4	-290	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTACTTATTATTTAG	NA	False	NA	10	True	AATAAA	-13	NA	30847480	30873891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ES.21299.19	chr3	+	5922	8	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-3	57	intron_retention	FALSE	canonical	1	1	junction_6	317.535471262982	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847481	30874238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868302_30873086_30873724
ES.21299.2	chr3	+	2153	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-23	33	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGGATATAAAAG	NA	False	NA	-18	True	NA	NA	NA	30847000	30874214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
ES.21299.20	chr3	+	2356	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-3	30511	intron_retention	FALSE	non_canonical	0	0	junction_8	248.734515849731	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGGAGTCGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	30847481	30905923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30874239_30905902
ES.21299.21	chr3	+	5860	8	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-2	61	intron_retention	FALSE	canonical	3	39	junction_7	252.336429136555	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCATTGGACTCTAAT	NA	False	NA	10	True	AATAAA	-20	NA	30847482	30874242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30873086_30873709
ES.21299.22	chr3	+	2101	8	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	1	33	intron_retention	FALSE	canonical	3	39	junction_7	251.365820091364	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGGATATAAAAG	NA	False	NA	-18	True	NA	NA	NA	30847485	30874214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ES.21299.23	chr3	+	6477	7	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	462	1174	1	57	intron_retention	FALSE	canonical	3	556	junction_4	93.5194572743495	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAAGCCATTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	30847485	30874238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382
ES.21299.25	chr3	+	2156	6	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	8180	1198	7719	33	3prime_fragment	FALSE	canonical	3	556	junction_2	66.4933079339568	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGGATATAAAAG	NA	False	NA	-18	True	NA	NA	NA	30855203	30874214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.21299.26	chr3	+	3346	6	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	8180	8	7719	-8	3prime_fragment	FALSE	canonical	3	556	junction_2	66.4933079339568	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAGTACGCAGTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	30855203	30875404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.21299.27	chr3	+	2857	1	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-11747	8419	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAGAAAAAACAAAAAA	5232	False	NA	55	True	GATAAA	-22	NA	30861252	30864109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30861300_30864100
ES.21299.28	chr3	+	2963	5	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	16029	1198	-9947	33	3prime_fragment	FALSE	canonical	3	556	junction_1	54.6277173237176	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGGATATAAAAG	7032	False	NA	-18	True	NA	NA	NA	30863052	30874214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.21299.29	chr3	+	2881	2	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	21358	4	-4618	-4	3prime_fragment	FALSE	canonical	3	669	junction_1	0	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTACGCAGTAGTGATG	4063	False	NA	NA	False	AATAAA	-17	NA	30868381	30875408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30868503_30872648
ES.21299.3	chr3	+	2821	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	-7	1153	-7	78	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTCAAACTAGTTTG	NA	False	NA	27	True	AATAAA	-37	NA	30847016	30874259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.21299.30	chr3	+	5360	1	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-4468	-290	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTACTTATTATTTAG	4213	False	NA	10	True	AATAAA	-13	NA	30868531	30873891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30868500_30873900
ES.21299.4	chr3	+	685	4	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	217	11264	217	8458	5prime_fragment	FALSE	canonical	3	760	junction_3	45.4923681023043	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGTGAAAAGGAAGATTC	NA	False	NA	94	True	AAAAAG	-19	NA	30847240	30864148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970
ES.21299.5	chr3	+	3060	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-201	-8	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAGTACGCAGTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	30847283	30875404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
ES.21299.6	chr3	+	1909	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-200	58	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAGCCATTGGACTCT	NA	False	NA	7	True	AATAAA	-17	NA	30847284	30874239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ES.21299.7	chr3	+	3080	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	-200	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACGCAGTAGTGATGGA	NA	False	NA	NA	False	AATAAA	-19	NA	30847284	30875410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
ES.21299.8	chr3	+	2018	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	433	1516	-28	-285	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTATTATTTAGACATT	NA	False	NA	15	True	AATAAA	-18	NA	30847456	30873896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ES.213.1	chr1	-	4141	6	FSM	ENSMUSG00000117310.3	ENSMUST00000233506.2	4145	6	4	0	4	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTTCTGCATTTGA	NA	False	NA	0	True	ATTAAA	-19	NA	30988847	30979382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.10	chr1	-	2876	6	NNC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	950.015789342472	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCCTTTTCCTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	30988837	30980663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30982431_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.11	chr1	-	2841	6	NNC	ENSMUSG00000117310.3	novel	2851	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1084.09593671409	1267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCCTTTTCCTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	30988837	30980663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30982405_30983012_30983082_30983616_30983748_30984018_30984112_30985118_30985718_30988629
ES.213.12	chr1	-	3451	5	NIC	ENSMUSG00000117310.3	novel	2851	6	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	443	junction_4	868.779423962147	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAATGTTTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	30988837	30980667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
ES.213.13	chr1	-	2454	6	NNC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	932.666585656418	1267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAATGTTTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	30988834	30980667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985507_30985721_30988629
ES.213.15	chr1	-	4250	3	NIC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	3	-7	intron_retention	FALSE	canonical	3	1976	junction_2	220.5	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAATGTTTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	30988833	30980667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30984112_30985118_30985721_30988629
ES.213.17	chr1	-	2626	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	1504	-1	-227	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATTGTGAATCAGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	30988837	30980887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.19	chr1	-	2502	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	1628	-1	-351	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTGCCTAAAATTAACT	NA	False	NA	NA	False	AATAAA	-28	NA	30988837	30981011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.21	chr1	-	3711	4	NIC	ENSMUSG00000026064.17	novel	3072	4	NA	NA	-396	1	intron_retention	FALSE	canonical	3	443	junction_3	888.022647358851	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCACTGAGGACACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	30988786	30981026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30982405_30983012_30983088_30983616_30985718_30988629
ES.213.22	chr1	-	3287	4	NIC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	-1	-366	intron_retention	FALSE	canonical	3	1976	junction_3	183.430883138279	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCACTGAGGACACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	30988837	30981026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30982405_30983012_30984112_30985118_30985721_30988629
ES.213.24	chr1	-	2366	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	1764	-1	-487	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATACTGTCTGGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	30988837	30981147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.25	chr1	-	2637	5	NIC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	-1	-487	intron_retention	FALSE	canonical	3	1976	junction_4	172.734623049347	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATACTGTCTGGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	30988837	30981147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30982405_30983012_30983088_30983616_30984112_30985118_30985721_30988629
ES.213.26	chr1	-	6555	3	ISM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	-2	488	-2	-488	intron_retention	FALSE	canonical	3	2271	junction_1	53.5	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTATACTGTCTGGGA	NA	False	NA	NA	False	ATTAAA	-14	NA	30988840	30981148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30982405_30983012_30983088_30983616
ES.213.27	chr1	-	1539	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-1	2591	-1	-1314	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTATTAGTCTATAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	30988837	30981974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.3	chr1	-	5133	5	NIC	ENSMUSG00000117310.3	novel	2851	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	443	junction_4	851.036830871614	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGTGTTTCTGCATTT	NA	False	NA	-2	True	ATTAAA	-17	NA	30988837	30979384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30985718_30988629
ES.213.5	chr1	-	3040	6	FSM	ENSMUSG00000117310.3	ENSMUST00000233506.2	4145	6	-173	1278	-173	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30989024	30980660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ES.213.6	chr1	-	5268	5	ISM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	495	0	429	0	3prime_fragment	FALSE	canonical	3	2271	junction_1	95.8237314030298	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988343	30980660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118
ES.213.7	chr1	-	3405	6	FSM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	-447	1278	-447	367	multi-exon	FALSE	canonical	1	3	junction_5	963.121093113426	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988837	30980660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988077
ES.213.8	chr1	-	3987	4	NIC	ENSMUSG00000117310.3	novel	2851	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	443	junction_3	960.600275290867	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988837	30980660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30983748_30984018_30984112_30985118_30985718_30988629
ES.213.9	chr1	-	3121	5	NIC	ENSMUSG00000117310.3	novel	4145	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1976	junction_4	172.734623049347	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCCTTTTCCTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	30988837	30980663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_30982405_30983012_30983088_30983616_30984112_30985118_30985721_30988629
ES.2130.1	chr1	-	159	1	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGGGAGGGGCTGAA	NA	False	NA	NA	False	NA	NA	NA	184490865	184490706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_184490700_184490900
ES.21300.1	chr3	+	1818	4	NNC	ENSMUSG00000037661.15	novel	2523	2	NA	NA	-204	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	107.116758726168	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30909894	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910035_30931383_30931482_30944090_30944191_30949858
ES.21300.10	chr3	+	531	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-46	-139	-3	110	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACTTTGATGGAGTAC	NA	False	NA	NA	False	ATTAAA	-36	NA	30910095	30950080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
ES.21300.12	chr3	+	1686	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	0	3	0	-1	multi-exon	FALSE	canonical	3	44	junction_2	125	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30910098	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931482_30949858
ES.21300.13	chr3	+	1890	5	NNC	ENSMUSG00000037661.15	novel	346	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.660099461887	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30910098	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949866
ES.21300.14	chr3	+	1741	4	NNC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.106713772723	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTTTTGTTTTTTTT	NA	False	NA	41	True	AATAAA	-26	NA	30910098	30951348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910152_30931383_30931482_30944090_30944191_30949858
ES.21300.15	chr3	+	4939	2	ISM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-43	13727	0	2604	5prime_fragment	FALSE	canonical	3	294	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCACAATTAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	30910098	30936214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_30910207_30931383
ES.21300.16	chr3	+	1619	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-42	-1231	1	-167	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTTGATGTTTTACTC	NA	False	NA	NA	False	AGTAAA	-15	NA	30910099	30951172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
ES.21300.17	chr3	+	2094	5	NIC	ENSMUSG00000037661.15	novel	1977	4	NA	NA	1	-33	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	102.806857747915	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTGGTATAAATAAAATA	NA	False	NA	-1	True	AATAAA	-12	NA	30910099	30951306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910207_30931383_30931711_30944090_30944191_30948277_30948390_30949858
ES.21300.18	chr3	+	4889	3	NNC	ENSMUSG00000037661.15	novel	1916	3	NA	NA	1	2604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCACAATTAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	30910099	30936214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910207_30931383_30936126_30936174
ES.21300.19	chr3	+	1939	4	NNC	ENSMUSG00000037661.15	novel	1977	4	NA	NA	1	2604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	138.592929112563	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCACAATTAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	30910099	30936214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910207_30931383_30932556_30935505_30936126_30936174
ES.21300.2	chr3	+	1942	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-194	-1402	-151	2	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTTTTTTGTTT	NA	False	NA	36	True	AATAAA	-21	NA	30909947	30951343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
ES.21300.21	chr3	+	2080	5	NIC	ENSMUSG00000037661.15	novel	754	5	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	77.9947914927657	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30910104	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30948277_30948390_30949858
ES.21300.22	chr3	+	2085	3	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	37	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTTTTTTGTTT	NA	False	NA	36	True	AATAAA	-21	NA	30910121	30951343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910395_30931383_30931711_30949858
ES.21300.24	chr3	+	1480	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	32	177	-7	-175	multi-exon	FALSE	canonical	3	44	junction_2	125	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCCAGCTTGATG	NA	False	NA	NA	False	AGTAAA	-7	NA	30910130	30951164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931482_30949858
ES.21300.25	chr3	+	2140	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108258.8	2139	4	-24	23	2	-23	multi-exon	FALSE	canonical	3	82	junction_1	77.1895214535122	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATATATTGGGAGA	NA	False	NA	9	True	AATAAA	-22	NA	30910139	30951316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910395_30931383_30931711_30944090_30944191_30949858
ES.21300.27	chr3	+	1984	5	NNC	ENSMUSG00000037661.15	novel	346	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.1403568418786	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910141	30951341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910395_30931383_30931482_30944090_30944191_30946784_30946835_30949858
ES.21300.28	chr3	+	4808	1	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	21090	2579	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30931381	30936189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30931400_30936200
ES.21300.29	chr3	+	1535	1	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	39418	-95	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAGATCTGAGCTTA	NA	False	NA	-63	True	TATAAA	-19	NA	30949709	30951244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30949700_30951200
ES.21300.3	chr3	+	1994	4	NNC	ENSMUSG00000037661.15	novel	2523	2	NA	NA	-151	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	98.1914230243943	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30909947	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_30910035_30931383_30931711_30944090_30944191_30949858
ES.21300.4	chr3	+	5139	2	FSM	ENSMUSG00000037661.15	ENSMUST00000130294.2	2523	2	-12	-2604	-12	2604	multi-exon	FALSE	canonical	3	82	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCACAATTAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	30910086	30936214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910395_30931383
ES.21300.5	chr3	+	1983	4	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910092	30951341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
ES.21300.6	chr3	+	1905	5	NIC	ENSMUSG00000037661.15	novel	346	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910094	30951341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
ES.21300.7	chr3	+	2024	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	-43	-4	-4	2	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTTTTTTGTTT	NA	False	NA	36	True	AATAAA	-21	NA	30910094	30951343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
ES.21300.8	chr3	+	1877	3	NIC	ENSMUSG00000037661.15	novel	2139	4	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	19	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTTTATTTGTTTTT	NA	False	NA	31	True	AATAAA	-44	NA	30910095	30951338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910395_30931383_30931482_30949858
ES.21300.9	chr3	+	1738	5	NIC	ENSMUSG00000037661.15	novel	346	4	NA	NA	-3	-164	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGATGTTTTACTCCAA	NA	False	NA	NA	False	AGTAAA	-18	NA	30910095	30951175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
ES.21301.1	chr3	-	2948	1	Antisense	novelGene_ENSMUSG00000037661.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30910454	30907506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_30907500_30910500
ES.21301.2	chr3	-	1366	3	Antisense	novelGene_ENSMUSG00000037661.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30910430	30907506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_30908399_30908511_30908628_30910072
ES.21302.1	chr3	-	1714	1	Intergenic	novelGene_17665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGCCCTGGAACTCA	5255	False	NA	NA	False	NA	NA	NA	30937210	30935496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_30935500_30937200
ES.21303.1	chr3	-	2932	1	Intergenic	novelGene_17666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	6977	False	NA	NA	False	NA	NA	NA	30943954	30941022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_30941000_30944000
ES.21304.1	chr3	+	1282	1	Intergenic	novelGene_17668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31006320	31007602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31006300_31007600
ES.21305.1	chr3	-	11029	16	NIC	ENSMUSG00000037652.16	novel	3491	17	NA	NA	-1	5	intron_retention	FALSE	canonical	1	3	junction_1	3.32264954516723	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTCTTTAAGCTTT	NA	False	NA	2	True	AATAAA	-20	NA	31023565	30953514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990100_30990149_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ES.21305.10	chr3	-	2840	1	NIC	ENSMUSG00000037652.16	novel	2808	9	NA	NA	-2	-8181	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31023556	31020716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_31020700_31023600
ES.21305.2	chr3	-	4118	1	ISM	ENSMUSG00000037652.16	ENSMUST00000168645.8	10976	15	64824	1089	28534	-936	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTTTAGATCTCTG	NA	False	NA	NA	False	AATATA	-19	NA	30958726	30954608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30954600_30958700
ES.21305.3	chr3	-	2634	15	NNC	ENSMUSG00000037652.16	novel	3019	15	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	3.53409053624371	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCCCTCCTTTAATTCT	NA	False	NA	NA	False	TATAAA	-31	NA	31023566	30961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30990587_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ES.21305.4	chr3	-	1761	9	ISM	ENSMUSG00000037652.16	ENSMUST00000046624.12	3491	17	32970	7471	-3324	-10	internal_fragment	FALSE	canonical	0	0	junction_8	3.65504787930336	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCCCTCCTTTAATTCT	NA	False	NA	NA	False	TATAAA	-31	NA	30990584	30961143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990100_30990170_30990433
ES.21305.5	chr3	-	3520	15	NNC	ENSMUSG00000037652.16	novel	10976	15	NA	NA	1	-12	intron_retention	FALSE	canonical	0	0	junction_14	3.86243023845594	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCCCCCTCCTTTAATT	NA	False	NA	NA	False	TATAAA	-29	NA	31023547	30961145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023334
ES.21305.6	chr3	-	3389	16	NIC	ENSMUSG00000037652.16	novel	3491	17	NA	NA	-2	-12	intron_retention	FALSE	canonical	1	3	junction_1	3.32264954516723	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCCCCCTCCTTTAATT	NA	False	NA	NA	False	TATAAA	-29	NA	31023556	30961145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990100_30990149_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ES.21305.7	chr3	-	3283	15	NNC	ENSMUSG00000037652.16	novel	3019	15	NA	NA	7	-30	intron_retention	FALSE	canonical	1	1	junction_2	3.61755921774303	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATTATTGATTTAC	NA	False	NA	NA	False	TATAAA	-11	NA	31023541	30961163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_30961640_30968243_30968451_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ES.21305.8	chr3	-	3319	15	FSM	ENSMUSG00000037652.16	ENSMUST00000129817.9	3019	15	-17	-283	-1	-43	multi-exon	FALSE	canonical	1	3	junction_1	3.2919196062294	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCTTTTAAAAATA	NA	False	NA	NA	False	TTTAAA	-22	NA	31023565	30961176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ES.21305.9	chr3	-	154	1	Intergenic	novelGene_17667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	31005700	31005546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31005500_31005700
ES.21306.1	chr3	+	4753	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	-262	217	-262	-217	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGACCATTTTCAACTT	NA	False	NA	23	True	AATAAA	-19	NA	31049633	31106891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.11	chr3	+	2468	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	18	2222	18	-2222	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTGGGTTCTAAATT	NA	False	NA	NA	False	AATAAA	-30	NA	31049913	31104886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.12	chr3	+	2304	15	ISM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	18	7408	18	4327	5prime_fragment	FALSE	canonical	3	904	junction_14	69.7912338802705	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGGCTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	31049913	31099700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030
ES.21306.13	chr3	+	2879	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	18	1811	18	-1811	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTCTTAACTACTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	31049913	31105297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.14	chr3	+	7042	16	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	19	-223	intron_retention	FALSE	canonical	3	926	junction_11	62.5475463591943	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049914	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31100712_31101120_31101237_31104338
ES.21306.17	chr3	+	4417	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	19	-221	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	256.702945724723	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049914	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.18	chr3	+	4490	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	19	51827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	244.902304784763	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTTCCTCATT	NA	False	NA	NA	False	NA	NA	NA	31049914	31158935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31106894_31158919
ES.21306.2	chr3	+	4719	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	-11	0	-11	0	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	31049884	31107108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.20	chr3	+	4456	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	21	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	333.912115740148	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049916	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093648_31095587_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101231_31104338
ES.21306.21	chr3	+	3358	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	22	1328	22	-1328	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGTCATGCATTTT	NA	False	NA	NA	False	NA	NA	NA	31049917	31105780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.23	chr3	+	5119	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	27	-223	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	247.371944433344	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049922	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072037_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.24	chr3	+	4449	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	31	-222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	251.96874634555	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049926	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083640_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.26	chr3	+	4448	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	31	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	251.976409067682	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049926	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100627_31100712_31101120_31101237_31104338
ES.21306.27	chr3	+	4317	16	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	31	-219	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	265.81117776012	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGGACCATTTTCAAC	NA	False	NA	21	True	AATAAA	-17	NA	31049926	31106889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.29	chr3	+	9189	15	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	36	-220	intron_retention	FALSE	canonical	3	926	junction_11	64.7337167296352	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	NA	False	NA	20	True	AATAAA	-16	NA	31049931	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31100712_31101120_31101237_31104338
ES.21306.3	chr3	+	6009	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	-11	-221	intron_retention	FALSE	canonical	3	904	junction_14	69.0388251276048	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049884	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31100712_31101120_31101237_31104338
ES.21306.31	chr3	+	4443	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	36	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	250.017051321619	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049931	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079348_31080386_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.32	chr3	+	3570	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	36	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTGGACCATTTTCAAC	NA	False	NA	21	True	AATAAA	-17	NA	31049931	31106889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31104454_31105336
ES.21306.33	chr3	+	4436	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	39	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	251.828551552763	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049934	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083710_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.34	chr3	+	4219	15	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	39	-223	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	274.800187149032	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049934	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.35	chr3	+	4520	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	40	-224	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	325.024595460591	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTGGACCATTT	NA	False	NA	16	True	AATAAA	-12	NA	31049935	31106884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31052559_31052636_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.36	chr3	+	5510	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	41	-222	intron_retention	FALSE	canonical	3	926	junction_11	61.9525713247642	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049936	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.37	chr3	+	4523	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	42	-220	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	322.728438569842	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	NA	False	NA	20	True	AATAAA	-16	NA	31049937	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31059321_31059399_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.39	chr3	+	4336	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	44	-221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049939	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31105162_31105268
ES.21306.4	chr3	+	4403	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	-6	-221	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	256.061447398374	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31049889	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.40	chr3	+	4319	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	44	-223	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	255.411891608437	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049939	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.41	chr3	+	4430	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	48	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	251.94526235854	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	NA	False	NA	20	True	AATAAA	-16	NA	31049943	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093187_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.42	chr3	+	4506	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	49	-224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	330.609911497291	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTGGACCATTT	NA	False	NA	16	True	AATAAA	-12	NA	31049944	31106884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31073553_31073625_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.43	chr3	+	4084	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	50	574	50	-574	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAATTATTACAGATGAT	NA	False	NA	NA	False	NA	NA	NA	31049945	31106534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.44	chr3	+	3633	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	52	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	NA	False	NA	20	True	AATAAA	-16	NA	31049947	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31104517_31105319
ES.21306.46	chr3	+	4425	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	53	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	251.837702446839	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049948	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072825_31079289_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.48	chr3	+	3892	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	57	759	57	-759	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTTGTATGTCTTCCC	NA	False	NA	NA	False	AGTAAA	-1	NA	31049952	31106349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.5	chr3	+	6429	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	-5	-222	intron_retention	FALSE	canonical	3	904	junction_13	62.6620087752539	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049890	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.50	chr3	+	4835	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	59	-223	intron_retention	FALSE	canonical	3	904	junction_14	66.6164100935348	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049954	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31101237_31104338
ES.21306.53	chr3	+	4304	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	59	-224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTGGACCATTT	NA	False	NA	16	True	AATAAA	-12	NA	31049954	31106884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31105268_31105388
ES.21306.56	chr3	+	4262	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	60	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATACCTATGAGGAG	NA	False	NA	6	True	AATAAA	-2	NA	31049955	31106874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31049979_31050130_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.57	chr3	+	4402	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	60	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	251.976409067682	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049955	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099087_31100621_31100712_31101120_31101237_31104338
ES.21306.59	chr3	+	4426	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	60	-222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	335.182747241625	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049955	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092176_31092602_31092697_31093177_31093265_31093516_31093646_31095583_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.6	chr3	+	4471	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	3	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	251.315569694626	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049898	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088693_31091991_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.60	chr3	+	4289	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	61	-242	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	256.032277933369	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGTTTAATACCT	NA	False	NA	-2	True	ATTAAA	-7	NA	31049956	31106866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31104338
ES.21306.61	chr3	+	1483	13	ISM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	63	11410	63	325	5prime_fragment	FALSE	canonical	3	926	junction_11	66.1594769393538	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGGTGTTACTATAAT	NA	False	NA	NA	False	AATAAA	-13	NA	31049958	31095698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590
ES.21306.63	chr3	+	4277	19	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	67	-224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	244.902304784763	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTGGACCATTT	NA	False	NA	16	True	AATAAA	-12	NA	31049962	31106884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338_31106603_31106742
ES.21306.64	chr3	+	7836	16	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	101	-220	intron_retention	FALSE	canonical	3	904	junction_13	64.0331858405381	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	NA	False	NA	20	True	AATAAA	-16	NA	31049996	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31095679_31097839_31097966_31099030_31100712_31101120_31101237_31104338
ES.21306.65	chr3	+	5638	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	116	-223	intron_retention	FALSE	canonical	3	904	junction_13	69.5016861306256	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31050011	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.66	chr3	+	4377	18	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	117	-223	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	251.779081502719	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31050012	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087317_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.67	chr3	+	4353	18	NNC	ENSMUSG00000037643.15	novel	456	4	NA	NA	-3615	-218	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	246.688630213913	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGGACCATTTTCAACT	NA	False	NA	22	True	AATAAA	-18	NA	31055726	31106890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31055929_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.68	chr3	+	4217	18	NNC	ENSMUSG00000037643.15	novel	456	4	NA	NA	-1598	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248.511081816218	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31057743	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31057813_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.69	chr3	+	4271	18	NIC	ENSMUSG00000037643.15	novel	614	8	NA	NA	-67	-222	combination_of_known_junctions	FALSE	canonical	2	25	junction_1	242.818955155274	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31059274	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31059399_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.70	chr3	+	4347	19	NNC	ENSMUSG00000037643.15	novel	614	8	NA	NA	-22	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	383.057038108484	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGACCATTTTCA	NA	False	NA	19	True	AATAAA	-15	NA	31059319	31106887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31059399_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31085935_31086056_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.71	chr3	+	4304	18	NNC	ENSMUSG00000037643.15	novel	456	4	NA	NA	12675	-223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248.511081816218	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31072016	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31072175_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.72	chr3	+	9254	14	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	-13116	-223	intron_retention	FALSE	canonical	3	926	junction_10	51.6950548720557	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31072754	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.73	chr3	+	4029	16	ISM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	29381	220	-6594	-220	3prime_fragment	FALSE	canonical	3	904	junction_12	65.8639675560334	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGTGGACCATTTTCAA	3187	False	NA	20	True	AATAAA	-16	NA	31079276	31106888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.74	chr3	+	176	1	Intergenic	novelGene_17669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	31088783	31088959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31088800_31089000
ES.21306.75	chr3	+	3187	7	ISM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	43618	222	850	-222	3prime_fragment	FALSE	canonical	3	904	junction_3	80.6825053321144	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	1793	False	NA	18	True	AATAAA	-14	NA	31093513	31106886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.76	chr3	+	6560	5	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	1575	-223	intron_retention	FALSE	canonical	3	904	junction_1	78.6078081363423	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	205	False	NA	17	True	AATAAA	-13	NA	31094238	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.77	chr3	+	2603	1	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	11619	-223	mono-exon	FALSE	NA	NA	NA	NA	NA	1204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	6003	False	NA	17	True	AATAAA	-13	NA	31104282	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31104300_31106900
ES.21306.78	chr3	+	174	1	Intergenic	novelGene_17675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGCAGTTAAA	8051	False	NA	NA	False	NA	NA	NA	31134575	31134749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31134600_31134700
ES.21306.79	chr3	+	6929	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-347	-4	-347	0	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTCAAGTCATCTTG	NA	False	NA	18	True	AATAAA	-20	NA	31148859	31176726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.80	chr3	+	6068	8	NNC	ENSMUSG00000027660.17	novel	6578	7	NA	NA	-241	-174	intron_retention	FALSE	canonical	0	0	junction_2	44.8598725284113	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATCTATCTGGTTACT	NA	False	NA	NA	False	AATAAA	-30	NA	31148965	31176548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603_31172856_31173432
ES.21306.81	chr3	+	6922	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	-205	0	-202	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTCAAGTCATCTTG	NA	False	NA	18	True	AATAAA	-20	NA	31149004	31176726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ES.21306.82	chr3	+	3462	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-174	3290	-174	3	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGGAAGTACTCATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	31149032	31173432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.83	chr3	+	6548	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-144	174	-144	-174	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATCTATCTGGTTACT	NA	False	NA	NA	False	AATAAA	-30	NA	31149062	31176548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.84	chr3	+	5335	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-140	1383	-140	-1383	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGATTTGTACATA	NA	False	NA	NA	False	NA	NA	NA	31149066	31175339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.85	chr3	+	6682	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	-143	178	-140	-174	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATCTATCTGGTTACT	NA	False	NA	NA	False	AATAAA	-30	NA	31149066	31176548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ES.21306.87	chr3	+	3480	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	-15	3113	-15	180	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGGACTTTTGTATG	NA	False	NA	NA	False	TATAAA	-20	NA	31149191	31173609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.88	chr3	+	3662	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	-11	3066	-8	231	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTATGACTCTTTAAT	NA	False	NA	NA	False	TTTAAA	-26	NA	31149198	31173660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ES.21306.89	chr3	+	5743	7	NNC	ENSMUSG00000027660.17	novel	6578	7	NA	NA	-1	-825	intron_retention	FALSE	non_canonical	0	0	junction_1	46.0558236153571	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTGTATTGTATCTT	NA	False	NA	NA	False	AAGAAA	-12	NA	31149212	31175897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31149307_31150855_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.9	chr3	+	4450	17	NNC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	14	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	257.637819610689	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGGACCATTTT	NA	False	NA	17	True	AATAAA	-13	NA	31049909	31106885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31050235_31072698_31072821_31079278_31079399_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ES.21306.91	chr3	+	2880	8	NNC	ENSMUSG00000027660.17	novel	6578	7	NA	NA	1	180	intron_retention	FALSE	canonical	0	0	junction_2	44.8598725284113	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGGACTTTTGTATG	NA	False	NA	NA	False	TATAAA	-20	NA	31149214	31173609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603_31172856_31173432
ES.21306.92	chr3	+	6000	7	NIC	ENSMUSG00000027660.17	novel	2899	9	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_1	46.0558236153571	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAAGTTTGGTTCAAGT	NA	False	NA	11	True	AATAAA	-13	NA	31149214	31176719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_31149307_31151418_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.93	chr3	+	3406	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	11	3300	7	-3	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTGGTGTGGAAGTAC	NA	False	NA	NA	False	ATTAAA	-23	NA	31149220	31173426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ES.21306.94	chr3	+	7121	6	ISM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	1003	-1	-772	1	3prime_fragment	FALSE	canonical	0	0	junction_1	40.2223818290265	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTGGTTCAAGTCATC	238	False	NA	15	True	AATAAA	-17	NA	31150209	31176723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.95	chr3	+	5194	4	ISM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	17821	-2	16046	2	3prime_fragment	FALSE	canonical	3	77	junction_1	7.71722460186015	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGGTTCAAGTCATCT	3144	False	NA	16	True	AATAAA	-18	NA	31167027	31176724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31167652_31170964_31171189_31171521_31171747_31172603
ES.21306.96	chr3	+	4345	2	ISM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	22314	0	20539	0	3prime_fragment	FALSE	canonical	3	81	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGGTTCAAGTCAT	7637	False	NA	14	True	AATAAA	-16	NA	31171520	31176722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_31171747_31172603
ES.21307.1	chr3	-	172	2	Antisense	novelGene_ENSMUSG00000098890.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTGGGTCAA	NA	False	NA	NA	False	NA	NA	NA	31115128	31090072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_31090103_31114986
ES.21307.2	chr3	-	135	1	Intergenic	novelGene_17670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31109080	31108945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31108900_31109100
ES.21307.3	chr3	-	225	1	Intergenic	novelGene_17671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTTAAGCTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	31110365	31110140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31110100_31110400
ES.21307.4	chr3	-	171	1	Intergenic	novelGene_17672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	31111045	31110874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31110900_31111000
ES.21307.5	chr3	-	236	1	Intergenic	novelGene_17673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCTTTTTAGAGTTA	NA	False	NA	22	True	NA	NA	NA	31115131	31114895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31114900_31115100
ES.21308.1	chr3	-	196	1	Intergenic	novelGene_17674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31123327	31123131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31123100_31123300
ES.21308.2	chr3	-	156	2	Antisense	novelGene_ENSMUSG00000027660.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATACATC	NA	False	NA	NA	False	NA	NA	NA	31196452	31123169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_31123278_31196404
ES.21308.3	chr3	-	179	1	Intergenic	novelGene_17676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGGAGATGAATTAAA	NA	False	NA	NA	False	NA	NA	NA	31194787	31194608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31194600_31194800
ES.21308.4	chr3	-	177	2	Intergenic	novelGene_17677	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGGAGATGAATT	NA	False	NA	NA	False	NA	NA	NA	31196455	31194611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31194637_31196303
ES.21308.5	chr3	-	177	1	Intergenic	novelGene_17678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	31196455	31196278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_31196300_31196500
ES.21309.1	chr3	+	171	1	Intergenic	novelGene_17679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAAGTACAGC	NA	False	NA	NA	False	NA	NA	NA	31199577	31199748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31199600_31199700
ES.21309.2	chr3	+	334	1	Intergenic	novelGene_17680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACAGAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	31199579	31199913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31199600_31199900
ES.2131.1	chr1	-	3014	6	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	11888	-1642	-6511	1642	3prime_fragment	FALSE	canonical	3	863	junction_4	43.9162839958027	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGCTGCTCTGCACTG	NA	False	NA	NA	False	AATAAA	-18	NA	184566190	184543622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056
ES.2131.2	chr1	-	1347	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	-40	610	-40	0	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGCTATTACGTTTTT	NA	False	NA	-10	True	AATAAA	-31	NA	184578118	184545874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ES.2131.3	chr1	-	1077	8	NNC	ENSMUSG00000073481.10	novel	1917	8	NA	NA	434	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	319.739179421514	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCGCTATTACGTTTT	NA	False	NA	-11	True	AATAAA	-30	NA	184577334	184545875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577227
ES.2131.4	chr1	-	4054	8	NNC	ENSMUSG00000073481.10	novel	1917	8	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	310.157958440008	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGAATGCTACACCC	NA	False	NA	-24	True	AATAAA	-17	NA	184578042	184545888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184546081_184551397_184552281_184552470_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ES.2131.5	chr1	-	1071	8	NNC	ENSMUSG00000073481.10	novel	1917	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_7	317.001770419314	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTCTGAATGCTACAC	NA	False	NA	-26	True	AATAAA	-15	NA	184577750	184545890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577634
ES.2131.6	chr1	-	556	5	NNC	ENSMUSG00000073481.10	novel	572	5	NA	NA	-1547	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	410.378179244462	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTCTGAATGCTACAC	NA	False	NA	-26	True	AATAAA	-15	NA	184556779	184545890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184556694
ES.2131.7	chr1	-	4866	8	NNC	ENSMUSG00000073481.10	novel	931	6	NA	NA	4	-1578	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	317.099739668703	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTGTGCTCACTCCTG	NA	False	NA	NA	False	NA	NA	NA	184578040	184547534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184547613_184547672_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ES.2131.8	chr1	-	3063	8	NNC	ENSMUSG00000073481.10	novel	931	6	NA	NA	4	-2432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	317.099739668703	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATGTGTTTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	184578040	184548388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184550389_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ES.2131.9	chr1	-	2543	4	ISM	ENSMUSG00000073481.10	ENSMUST00000162501.7	651	5	-275	3033	1	-1878	5prime_fragment	FALSE	canonical	3	760	junction_2	59.1964713663088	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAAACAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	184578043	184563014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_184564914_184566056_184566226_184573450_184573625_184577742
ES.21310.1	chr3	+	241	1	Intergenic	novelGene_17681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACAGGGCTTGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	31213800	31214041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_31213800_31214000
ES.21311.1	chr3	-	180	1	ISM	ENSMUSG00000069072.10	ENSMUST00000091259.9	8897	8	103966	3375	51982	-3375	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCATGTGCT	NA	False	NA	NA	False	NA	NA	NA	31260561	31260381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_31260400_31260600
ES.21312.1	chr3	+	2511	6	NNC	ENSMUSG00000037610.16	novel	338	2	NA	NA	-106206	0	intron_retention	FALSE	canonical	0	0	junction_1	0.8	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCAAATGTGTAATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	32104056	32253914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32104318_32108166_32108236_32210195_32210319_32232979_32233151_32235979_32236176_32252223
ES.21312.2	chr3	+	2243	5	NNC	ENSMUSG00000037610.16	novel	338	2	NA	NA	-88799	1	intron_retention	FALSE	canonical	0	0	junction_1	0.866025403784439	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCAAATGTGTAATTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	32121463	32253915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32121525_32210195_32210319_32232979_32233151_32235979_32236176_32252223
ES.21313.1	chr3	+	174	1	Intergenic	novelGene_17682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATTAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	32380453	32380627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_32380500_32380600
ES.21314.1	chr3	+	2123	1	Antisense	novelGene_ENSMUSG00000027663.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAATGAAAGA	4578	False	NA	NA	False	NA	NA	NA	32419447	32421570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_32419400_32421600
ES.21315.1	chr3	-	1944	1	Genic_Genomic	ENSMUSG00000027663.13	novel	NA	NA	NA	NA	30277	1552	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	8889	False	NA	NA	False	NA	NA	NA	32389332	32387388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_32387400_32389300
ES.21315.10	chr3	-	2843	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	64	4890	6	-4886	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTAACTGTCTCATC	NA	False	NA	NA	False	AATATA	-45	NA	32419763	32393830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ES.21315.11	chr3	-	2547	6	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-40	-5406	intron_retention	FALSE	canonical	3	21	junction_5	41.5855744219074	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTGTTCACTGTGT	NA	False	NA	-3	True	AATAAA	-44	NA	32419649	32394350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419314
ES.21315.12	chr3	-	2441	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-73	5429	-73	-5425	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGAGTGTTATATGT	NA	False	NA	-22	True	AATAAA	-25	NA	32419900	32394369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ES.21315.13	chr3	-	2212	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	5	-5431	intron_retention	FALSE	canonical	0	0	junction_4	58.7721022254607	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACTGATGGAGTGTT	NA	False	NA	-28	True	AATAAA	-19	NA	32419822	32394375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399669_32415038_32415366_32419736
ES.21315.14	chr3	-	4005	5	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-5	-5431	intron_retention	FALSE	canonical	3	71	junction_4	22.792542640083	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACTGATGGAGTGTT	NA	False	NA	-28	True	AATAAA	-19	NA	32419832	32394375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ES.21315.15	chr3	-	1902	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-5	-5900	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	46.1024945095165	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGTGTTTGAGATTTC	NA	False	NA	NA	False	AATATA	-15	NA	32419832	32394844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32395845_32397482_32397584_32397696_32397868_32399606_32399730_32415038_32415366_32419652
ES.21315.16	chr3	-	1937	1	FSM	ENSMUSG00000027663.13	ENSMUST00000195055.2	3813	1	319	1557	-17	-1557	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTAAACGATACTCCTA	NA	False	NA	NA	False	NA	NA	NA	32419844	32417907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32417900_32419800
ES.21315.2	chr3	-	7881	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	-84	0	-84	0	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	NA	False	NA	0	True	AATAAA	-26	NA	32419911	32388940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ES.21315.3	chr3	-	6466	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	4288	0	intron_retention	FALSE	non_canonical	0	0	junction_1	49.9543791874146	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	NA	False	NA	0	True	AATAAA	-26	NA	32415321	32388940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32392739_32393850_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038
ES.21315.5	chr3	-	7711	6	NNC	ENSMUSG00000027663.13	novel	7672	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	11	junction_5	45.5692879031481	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTCGGTTCTGAGT	NA	False	NA	-4	True	AATAAA	-22	NA	32419829	32388944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419736
ES.21315.6	chr3	-	7642	6	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	269	-2	intron_retention	FALSE	canonical	3	21	junction_5	41.5855744219074	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCGTTCGGTTCTGA	NA	False	NA	-6	True	AATAAA	-20	NA	32419340	32388946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419314
ES.21315.7	chr3	-	7751	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_4	55.1412731082626	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGCGTTCGGTTCTGA	NA	False	NA	-6	True	AATAAA	-20	NA	32419844	32388946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32395845_32397482_32397584_32397696_32397868_32399606_32399669_32415038_32415366_32419652
ES.21315.8	chr3	-	3252	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	25561	2074	25343	-2070	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGCCTCAGAATTTC	3955	False	NA	NA	False	ATTAAA	-23	NA	32394266	32391014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_32391000_32394300
ES.21315.9	chr3	-	5387	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	-40	-2505	intron_retention	FALSE	canonical	0	0	junction_4	56.6158988270963	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCCTTGTGAATTCTGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	32419649	32391449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399669_32415038_32415366_32419314
ES.21316.1	chr3	+	4711	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-636	973	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCTGTCCCATAGTCA	NA	False	NA	NA	False	AATATA	-14	NA	32451183	32517950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.10	chr3	+	4250	17	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-490	-6772	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	29.2243477258261	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTAAGTGGTGGTGTA	NA	False	NA	NA	False	AATACA	-26	NA	32451329	32510205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32509173_32509282
ES.21316.12	chr3	+	3105	16	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-469	-8006	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	14.0117411084022	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCTGAGTCGAGTACT	NA	False	NA	NA	False	NA	NA	NA	32451350	32508971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527
ES.21316.13	chr3	+	4653	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-468	940	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	39.2076523143123	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACTATCATTAATATA	NA	False	NA	NA	False	ATTAAA	-37	NA	32451351	32517917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32505904_32506077_32508009_32508117_32508527_32508650_32509803_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.14	chr3	+	7271	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-464	426	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGGCGTCATAGAT	NA	False	NA	NA	False	NA	NA	NA	32451355	32520682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.15	chr3	+	5578	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-459	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	32.9207114538915	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTAAAGTGTAGTT	NA	False	NA	83	True	CATAAA	-3	NA	32451360	32520244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497730_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709_32517861_32519107
ES.21316.16	chr3	+	6439	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-458	1620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	26.6023965085855	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATAAATAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32451361	32518597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32511580_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.17	chr3	+	6831	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-458	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	26.6023965085855	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTGTGTAAAGTGTAG	NA	False	NA	81	True	CATAAA	-1	NA	32451361	32520242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514004_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.18	chr3	+	5480	19	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-454	1617	intron_retention	FALSE	canonical	1	2	junction_12	26.4433356443547	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAATAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	32451365	32518594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32505904_32506077_32508009_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.19	chr3	+	6534	20	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-451	1591	intron_retention	FALSE	canonical	3	74	junction_2	14.2107212462264	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32451368	32518568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.2	chr3	+	3842	13	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-629	1627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	32.0702354216492	224	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32451190	32518604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504097_32517074
ES.21316.20	chr3	+	5371	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-451	1620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.6862488533088	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATAAATAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32451368	32518597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497776_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32509803_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.21	chr3	+	7033	20	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-449	1589	intron_retention	FALSE	non_canonical	0	0	junction_15	26.0840321135736	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32451370	32518566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32509173_32509282_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.23	chr3	+	4408	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-448	949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.9657021294405	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAATATATATTCTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	32451371	32517926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490565_32490655_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.24	chr3	+	6721	20	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-447	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	26.8449946845252	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTAGTTCTTATTAAT	NA	False	NA	92	True	CATAAA	-12	NA	32451372	32520253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.25	chr3	+	5674	20	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-447	332	intron_retention	FALSE	canonical	1	1	junction_16	34.4663310759839	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAAAACTAGAATGCTG	NA	False	NA	NA	False	AATACA	-12	NA	32451372	32517309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32509803_32510051_32510241_32510321_32514010_32515998_32516709
ES.21316.26	chr3	+	3961	17	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-443	3046	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	29.010167937294	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-17	NA	32451376	32525681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32524477
ES.21316.27	chr3	+	3983	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-434	341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.0362269372493	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAATGCTGTTGTTTGTC	NA	False	NA	NA	False	AATACA	-21	NA	32451385	32517318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491551_32491658_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.28	chr3	+	6438	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-426	1619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	33.1427203062309	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAATAAATAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	32451393	32518596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32509173_32509282_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.3	chr3	+	7039	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-626	32	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTAGATGTGTGCCCTCT	NA	False	NA	127	True	NA	NA	NA	32451193	32520288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.31	chr3	+	3851	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-406	337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.2150243181272	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGAATGCTGTTGTT	NA	False	NA	NA	False	AATACA	-17	NA	32451413	32517314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502235_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.32	chr3	+	4969	21	NNC	ENSMUSG00000027665.14	novel	6171	20	NA	NA	-390	1619	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	25.5900371238496	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAATAAATAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	32451429	32518596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490565_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.33	chr3	+	4990	20	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-388	1618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	27.0727960892229	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAATAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	32451431	32518595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515845_32515998_32516709
ES.21316.37	chr3	+	4552	22	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-378	978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.5578501354462	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCCATAGTCATGCAT	NA	False	NA	NA	False	AATATA	-19	NA	32451441	32517955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32498828_32498923_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.39	chr3	+	3134	11	ISM	ENSMUSG00000027665.14	ENSMUST00000108242.2	6171	20	13143	1689	-12158	1590	3prime_fragment	FALSE	canonical	3	85	junction_6	14.7648230602334	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAGAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32503667	32518567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.4	chr3	+	4059	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-610	347	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGTTTGTCTGCCAG	NA	False	NA	NA	False	AATACA	-27	NA	32451209	32517324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.40	chr3	+	3584	7	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-8062	920	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	40.6926146725532	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGGCTATTTATATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	32507763	32517897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32508117_32508527_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.41	chr3	+	1259	6	NNC	ENSMUSG00000027665.14	novel	440	2	NA	NA	-5909	337	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.1969386559716	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGAATGCTGTTGTT	NA	False	NA	NA	False	AATACA	-17	NA	32509916	32517314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.42	chr3	+	4068	6	NNC	ENSMUSG00000027665.14	novel	440	2	NA	NA	-5793	-17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.1969386559716	222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTTTGTGTAAAGTG	NA	False	NA	78	True	AAAACA	-10	NA	32510032	32520239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32510051_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.43	chr3	+	5117	3	NIC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-3830	946	intron_retention	FALSE	canonical	3	91	junction_1	1	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCATTAATATATATTCT	1293	False	NA	NA	False	ATTAAA	-43	NA	32511995	32517923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32515747_32515845_32515998_32516709
ES.21316.44	chr3	+	2825	1	NIC	ENSMUSG00000027665.14	novel	6689	21	NA	NA	-53	1620	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATAAATAAAAAGGAAAAA	5070	False	NA	NA	False	NA	NA	NA	32515772	32518597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32515800_32518600
ES.21316.5	chr3	+	5357	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-604	-1628	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAATAATCTCCTGAC	NA	False	NA	NA	False	NA	NA	NA	32451215	32518628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.6	chr3	+	4393	16	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-574	-6823	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	14.0117411084022	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTTATCTTGAACATTG	NA	False	NA	NA	False	ATTAAA	-22	NA	32451245	32510154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527
ES.21316.7	chr3	+	4277	17	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-562	-6821	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	29.2243477258261	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTATCTTGAACATTGAA	NA	False	NA	NA	False	ATTAAA	-24	NA	32451257	32510156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32509143_32509248
ES.21316.8	chr3	+	4458	21	NNC	ENSMUSG00000027665.14	novel	6171	20	NA	NA	-556	942	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	25.5900371238496	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTATCATTAATATATA	NA	False	NA	NA	False	ATTAAA	-39	NA	32451263	32517919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490565_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ES.21316.9	chr3	+	6806	19	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-513	-1634	intron_retention	FALSE	canonical	3	74	junction_2	14.1466088943562	224	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACTGTGCAATAATCT	NA	False	NA	NA	False	NA	NA	NA	32451306	32518622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32515998_32516709
ES.21317.1	chr3	-	4894	1	Antisense	novelGene_ENSMUSG00000027665.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAGAAAGCAAACAAAC	NA	False	NA	NA	False	TTTAAA	-39	NA	32524819	32519925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32519900_32524800
ES.21318.1	chr3	+	1831	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	285	95	9	-5	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3191	False	NA	17	True	AATAAA	-17	NA	32564692	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.10	chr3	+	1980	7	NNC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-61	-22	intron_retention	FALSE	canonical	3	23	junction_1	77.7488835218159	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGGTGTTTTCAATTG	3250	False	NA	90	True	AATATA	-10	NA	32564751	32574960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32564882_32567157_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.11	chr3	+	2192	1	NIC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-51	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTCCTTTTCTTAC	3260	False	NA	NA	False	NA	NA	NA	32564761	32566953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564800_32567000
ES.21318.12	chr3	+	663	1	NIC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-37	-1886	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGCAACGACCCAGTCT	3274	False	NA	NA	False	AATAAA	-18	NA	32564775	32565438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564800_32565400
ES.21318.13	chr3	+	3846	6	NIC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-23	-6	intron_retention	FALSE	canonical	3	110	junction_1	48.9628430547083	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGGGCAAGCTGAAA	3288	False	NA	16	True	AATAAA	-16	NA	32564789	32574886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32573394_32573680
ES.21318.14	chr3	+	4552	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	116	-2680	-13	2590	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGTTTTCTTTTGGT	3298	False	NA	NA	False	TTTAAA	-22	NA	32564799	32577572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.15	chr3	+	1554	5	NIC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-13	48	intron_retention	FALSE	canonical	1	1	junction_2	100.718667584515	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCATCTAGATTTCAA	3298	False	NA	NA	False	NA	NA	NA	32564799	32574714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564882_32567149_32567342_32571177_32571289_32573258_32573394_32573680
ES.21318.16	chr3	+	4125	6	ISM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	402	95	-3	-5	3prime_fragment	FALSE	canonical	3	192	junction_2	18.5752523536021	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3308	False	NA	17	True	AATAAA	-17	NA	32564809	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.17	chr3	+	1781	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193119.6	643	7	34	-1172	34	-5	multi-exon	FALSE	canonical	1	1	junction_1	85.7690697940308	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3345	False	NA	17	True	AATAAA	-17	NA	32564846	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32564882_32567188_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.18	chr3	+	7762	4	NNC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	49	0	intron_retention	FALSE	non_canonical	0	0	junction_1	105.565145763173	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3360	False	NA	22	True	AATAAA	-22	NA	32564861	32574892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32565137_32566289_32568604_32569432_32573394_32573680
ES.21318.19	chr3	+	1901	8	NNC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	50	-5	intron_retention	FALSE	canonical	0	0	junction_5	99.2564191107753	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3361	False	NA	17	True	AATAAA	-17	NA	32564862	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32571674_32571772_32573258_32573394_32573680
ES.21318.2	chr3	+	1817	7	NNC	ENSMUSG00000027667.14	novel	2211	7	NA	NA	15	-5	intron_retention	FALSE	canonical	2	13	junction_1	81.390007576688	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3197	False	NA	17	True	AATAAA	-17	NA	32564698	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32564739_32567157_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.20	chr3	+	2589	7	NNC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	60	-5	intron_retention	FALSE	canonical	0	0	junction_1	86.1344233677157	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3371	False	NA	17	True	AATAAA	-17	NA	32564872	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32565677_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.21	chr3	+	2007	7	NNC	ENSMUSG00000027667.14	novel	3175	5	NA	NA	81	-6	intron_retention	FALSE	canonical	0	0	junction_1	86.1344233677157	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGGGCAAGCTGAAA	3392	False	NA	16	True	AATAAA	-16	NA	32564893	32574886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32565117_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.22	chr3	+	5120	4	NIC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	-606	0	intron_retention	FALSE	canonical	3	10	junction_2	108.317434730826	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	4219	False	NA	22	True	AATAAA	-22	NA	32565720	32574892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32567342_32568532_32568604_32571177_32573394_32573680
ES.21318.3	chr3	+	1786	7	NIC	ENSMUSG00000027667.14	novel	2211	7	NA	NA	15	-5	intron_retention	FALSE	canonical	0	0	junction_1	86.1344233677157	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3197	False	NA	17	True	AATAAA	-17	NA	32564698	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564739_32567188_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.4	chr3	+	4513	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	291	-2593	15	2593	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTTTTGGTTTT	3197	False	NA	NA	False	TTTAAA	-25	NA	32564698	32577575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.5	chr3	+	2027	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	20	-59	20	-31	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTAATGGTGGTGT	3202	False	NA	81	True	AATATA	-1	NA	32564703	32574951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.6	chr3	+	1922	7	NNC	ENSMUSG00000027667.14	novel	2211	7	NA	NA	22	-5	intron_retention	FALSE	canonical	0	0	junction_1	86.1344233677157	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3204	False	NA	17	True	AATAAA	-17	NA	32564705	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32564739_32567045_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ES.21318.7	chr3	+	1747	6	NIC	ENSMUSG00000027667.14	novel	2211	7	NA	NA	24	-5	intron_retention	FALSE	canonical	3	10	junction_3	101.887388817262	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGCAAGCTGAAAT	3206	False	NA	17	True	AATAAA	-17	NA	32564707	32574887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564739_32567149_32567342_32568532_32568604_32571177_32571289_32573258_32573394_32573680
ES.21318.8	chr3	+	1000	1	NIC	ENSMUSG00000027667.14	novel	2211	7	NA	NA	37	-1604	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAAAAAAG	3219	False	NA	NA	False	NA	NA	NA	32564720	32565720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32564700_32565700
ES.21318.9	chr3	+	4123	5	FSM	ENSMUSG00000027667.14	ENSMUST00000192985.6	547	5	-2408	-1168	57	-7	multi-exon	FALSE	canonical	3	10	junction_2	99.1274432233577	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGGGCAAGCTGAA	3239	False	NA	15	True	AATAAA	-15	NA	32564740	32574885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32567342_32568532_32568604_32571177_32571289_32573258_32573394_32573680
ES.21319.1	chr3	+	3260	19	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-108	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.571959037459	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTAGCCACGCATG	NA	False	NA	29	True	ATTAAA	-26	NA	32583505	32631835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32584777_32584921_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.10	chr3	+	2831	19	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.724346445186	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGATGAATTCCTTTA	NA	False	NA	0	True	AGTAAA	-17	NA	32583631	32631493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32584327_32584510_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.11	chr3	+	3166	19	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	22	323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	171.407895578549	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAGGCCTATCATTGTA	NA	False	NA	19	True	ATTAAA	-16	NA	32583635	32631825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32593537_32593727_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.12	chr3	+	3039	19	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	27	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	171.058974741187	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32583640	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32609791_32609858_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.15	chr3	+	1412	9	ISM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	32	23467	32	-7362	5prime_fragment	FALSE	canonical	3	429	junction_6	35.1085370672149	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTGTGCAATGAATGG	NA	False	NA	NA	False	TATAAA	-23	NA	32583645	32609921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622
ES.21319.16	chr3	+	2842	17	NIC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-30	324	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	133.834727836238	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32583649	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.18	chr3	+	3143	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-23	326	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	124.664366008291	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCCTATCATTGTAGCC	NA	False	NA	22	True	ATTAAA	-19	NA	32583656	32631828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32584029_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.19	chr3	+	4588	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	130.567883946777	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGCATTTATCTCAG	NA	False	NA	NA	False	AATAAA	-22	NA	32583670	32633381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598415_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.2	chr3	+	5225	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	-5	-658	-5	658	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTGACTTTTAAGAATA	NA	False	NA	NA	False	ATTAAA	-19	NA	32583608	32634046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.20	chr3	+	2927	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-8	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	172.737515134808	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAGGCCTATCATTGTA	NA	False	NA	19	True	ATTAAA	-16	NA	32583671	32631825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598226_32598325_32600736_32600845_32608303_32608455_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.21	chr3	+	3109	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	-8	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.51199505859	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32583671	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609858_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.22	chr3	+	2671	17	NIC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	68	334	combination_of_known_splicesites	FALSE	canonical	3	7	junction_15	132.514135448827	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTGTAGCCACGCATGA	NA	False	NA	30	True	ATTAAA	-27	NA	32583755	32631836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32628382_32628518_32631211
ES.21319.24	chr3	+	5012	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	74	635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	131.21740326807	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCTATGGTATTTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	32583761	32634023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628493_32631223
ES.21319.25	chr3	+	2845	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	94	323	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	131.010129300138	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAGGCCTATCATTGTA	NA	False	NA	19	True	ATTAAA	-16	NA	32583781	32631825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617643_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.26	chr3	+	4559	18	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	99	-14	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	124.664366008291	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGGTAAATATAGCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	32583786	32633374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32584029_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.27	chr3	+	3189	19	NNC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	103	324	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	170.724346445186	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32583790	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32584029_32584327_32584510_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.28	chr3	+	2787	17	NNC	ENSMUSG00000027668.14	novel	1602	7	NA	NA	1998	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.125867249761	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32587700	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32587838_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.3	chr3	+	4574	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	3	-15	3	15	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTGTTTTCCACTCCC	NA	False	NA	NA	False	AATAAA	-44	NA	32583616	32633403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.30	chr3	+	1855	10	ISM	ENSMUSG00000027668.14	ENSMUST00000118286.8	2789	17	23919	-323	1407	323	3prime_fragment	FALSE	canonical	3	515	junction_4	31.8879210073789	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAGGCCTATCATTGTA	NA	False	NA	19	True	ATTAAA	-16	NA	32609621	32631825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.31	chr3	+	5903	8	NIC	ENSMUSG00000027668.14	novel	2789	17	NA	NA	-2772	324	intron_retention	FALSE	canonical	3	515	junction_2	33.4737179876746	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGGCCTATCATTGTAG	NA	False	NA	20	True	ATTAAA	-17	NA	32612922	32631826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.32	chr3	+	3734	1	Intergenic	novelGene_17683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32624565	32628299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_32624600_32628300
ES.21319.4	chr3	+	3008	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	4	1550	4	336	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAGCCACGCATGAAG	NA	False	NA	32	True	ATTAAA	-29	NA	32583617	32631838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.5	chr3	+	2664	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	5	1893	5	-7	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATGAATTCCTTTAGA	NA	False	NA	2	True	AGTAAA	-19	NA	32583618	32631495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.6	chr3	+	4979	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	14	-431	14	431	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTGGGCTGGAGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	32583627	32633819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ES.21319.9	chr3	+	3513	16	ISM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	15	8277	15	632	5prime_fragment	FALSE	canonical	3	429	junction_6	45.0066661729127	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGTATTGTGTATTTA	NA	False	NA	NA	False	ATTAAA	-36	NA	32583628	32625111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636
ES.2132.1	chr1	+	4582	1	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTGTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	184584119	184588701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184584100_184588700
ES.21320.1	chr3	-	6136	4	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	5764	False	NA	NA	False	AAAACA	-16	NA	32593614	32585008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32585836_32586024_32586164_32588384_32593198_32593257
ES.21320.2	chr3	-	3666	3	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	8293	False	NA	NA	False	AAAACA	-16	NA	32591085	32585008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32585831_32586020_32586164_32588384
ES.21320.3	chr3	-	5887	2	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	8293	False	NA	NA	False	AAAACA	-16	NA	32591085	32585008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32585831_32586020
ES.21320.5	chr3	-	2196	5	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAACAAATAAAAAA	5764	False	NA	NA	False	NA	NA	NA	32593614	32585045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32585831_32586020_32586164_32588384_32588521_32592416_32593198_32593263
ES.21320.6	chr3	-	7919	3	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATGATAAAGGTGTGG	5764	False	NA	NA	False	NA	NA	NA	32593614	32585439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32585831_32586020_32593198_32593263
ES.21321.1	chr3	-	1579	1	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAGCCTAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	32617749	32616170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32616200_32617700
ES.21321.2	chr3	-	1605	5	Antisense	novelGene_ENSMUSG00000027668.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAGCCTAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	32622455	32616170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32617286_32617521_32617629_32617941_32618044_32618223_32618453_32622403
ES.21322.1	chr3	-	5969	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	28	0	28	0	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTGTACCTTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	32670706	32634480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21322.10	chr3	-	3419	5	NNC	ENSMUSG00000027669.15	novel	2357	9	NA	NA	5359	-3	intron_retention	FALSE	canonical	0	0	junction_4	32.0887441324836	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTTTTACTTTTCCAT	NA	False	NA	-5	True	TATAAA	-13	NA	32646968	32638149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32639376_32641709_32641927_32643857_32644213_32645259_32645992_32646079
ES.21322.12	chr3	-	1294	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	61	4642	1	81	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGTAGTTTATTGA	NA	False	NA	NA	False	TATAAA	-12	NA	32670673	32639122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21322.3	chr3	-	4993	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	60	944	0	-944	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCTCTAATCTTGTTGC	NA	False	NA	NA	False	AATAAA	-21	NA	32670674	32635424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21322.4	chr3	-	2819	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	52	3126	-4	540	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTTGTTTATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	32670682	32637606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21322.5	chr3	-	6633	8	NIC	ENSMUSG00000027669.15	novel	5997	10	NA	NA	-3	539	intron_retention	FALSE	canonical	0	0	junction_5	25.9174513738193	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTTTGTTTATGAAAA	NA	False	NA	NA	False	NA	NA	NA	32670681	32637607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32650425_32650533_32652274_32656290_32670587
ES.21322.6	chr3	-	2970	3	ISM	ENSMUSG00000027669.15	ENSMUST00000108234.8	2510	11	25821	-536	7482	536	intron_retention	FALSE	canonical	3	77	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCCCTTTTGTTTATGA	NA	False	NA	NA	False	NA	NA	NA	32644845	32637610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_32639376_32641709_32641927_32643857
ES.21322.7	chr3	-	5129	2	ISM	ENSMUSG00000027669.15	ENSMUST00000192116.2	728	7	7121	-3708	7121	0	intron_retention	FALSE	canonical	3	79	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32645206	32638146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_32641927_32643857
ES.21322.8	chr3	-	2303	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	28	3666	28	0	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32670706	32638146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21322.9	chr3	-	4154	9	NIC	ENSMUSG00000027669.15	novel	2510	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	60	junction_7	7.94905654779232	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32670673	32638146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ES.21323.1	chr3	+	176	1	Intergenic	novelGene_17684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAACCTAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	32705852	32706028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_32705900_32706000
ES.21324.1	chr3	-	387	1	Intergenic	novelGene_17685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32713841	32713454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_32713500_32713800
ES.21325.1	chr3	-	162	1	Intergenic	novelGene_17686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	5512	False	NA	NA	False	NA	NA	NA	32758554	32758392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_32758400_32758600
ES.21326.1	chr3	-	522	2	Antisense	novelGene_ENSMUSG00000027671.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	1424	False	NA	NA	False	NA	NA	NA	32762642	32759357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_32759855_32762617
ES.21327.1	chr3	+	2000	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	19	-9	19	9	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTGTGTGACTGGCT	NA	False	NA	32	True	AATAAA	-29	NA	32762674	32781131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.10	chr3	+	1720	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-66	-2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	397.893227930978	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	21	True	AATAAA	-18	NA	32762847	32781120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
ES.21327.13	chr3	+	1962	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-58	1	intron_retention	FALSE	canonical	3	1234	junction_8	104.723312696945	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762855	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.14	chr3	+	5184	11	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-51	1	intron_retention	FALSE	canonical	3	1234	junction_6	114.220838729192	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762862	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766425_32768665_32768767_32769564_32769663_32772179_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.16	chr3	+	1744	13	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-39	-1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	398.602315040386	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGTGCTTCATTGAT	NA	False	NA	NA	False	ATTAAA	-29	NA	32762874	32779885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774452_32774583_32774665_32776768_32776865_32779395
ES.21327.17	chr3	+	2522	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	222	-734	-36	734	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCTTAGTCTAGAATAAA	NA	False	NA	NA	False	NA	NA	NA	32762877	32781856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.19	chr3	+	2049	13	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	522.836946114391	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCGTGCTGGATTTGT	NA	False	NA	18	True	AATAAA	-15	NA	32762881	32781117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768299_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
ES.21327.2	chr3	+	5253	12	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-94	-2	intron_retention	FALSE	canonical	0	0	junction_9	421.167425141119	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	21	True	AATAAA	-18	NA	32762819	32781120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774953_32776768_32776865_32779395_32779483_32780670
ES.21327.20	chr3	+	3885	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	1234	junction_9	104.969307683511	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	21	True	AATAAA	-18	NA	32762882	32781120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32776865_32779395_32779483_32780670
ES.21327.21	chr3	+	5009	12	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	2	intron_retention	FALSE	canonical	3	1234	junction_7	110.218190816112	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTGCTGGATTTGTCT	NA	False	NA	20	True	AATAAA	-17	NA	32762882	32781119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.22	chr3	+	3421	11	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	1	intron_retention	FALSE	canonical	3	1234	junction_6	105.129253778385	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762882	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766425_32768665_32768767_32769564_32769663_32772179_32772624_32772715_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.23	chr3	+	8675	10	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	1	intron_retention	FALSE	canonical	3	1234	junction_7	111.496885855864	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762882	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32774112_32774334_32774665_32776768_32779483_32780670
ES.21327.24	chr3	+	6009	12	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	0	intron_retention	FALSE	canonical	3	1234	junction_7	101.089846299188	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCGTGCTGGATTTGT	NA	False	NA	18	True	AATAAA	-15	NA	32762882	32781117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.25	chr3	+	8415	10	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-31	4	intron_retention	FALSE	canonical	3	1234	junction_5	93.6254687307985	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATTTGTCTGTGTGAC	NA	False	NA	27	True	AATAAA	-24	NA	32762882	32781126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.27	chr3	+	1793	14	NNC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	390.40396314314	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32762891	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32763030_32765993_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.28	chr3	+	5920	11	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-184	1	intron_retention	FALSE	canonical	3	1234	junction_6	105.250368170377	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	False	NA	19	True	AATAAA	-16	NA	32763128	32781118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.29	chr3	+	1985	14	NIC	ENSMUSG00000027671.15	novel	922	8	NA	NA	-172	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	382.691171239132	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	21	True	AATAAA	-18	NA	32763140	32781120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763492_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.30	chr3	+	4658	12	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-170	-3	intron_retention	FALSE	canonical	3	1234	junction_7	109.293145876295	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAAGCGTGCTGGATT	NA	False	NA	15	True	AATAAA	-12	NA	32763142	32781114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.31	chr3	+	3450	11	NIC	ENSMUSG00000027671.15	novel	922	8	NA	NA	-170	0	intron_retention	FALSE	canonical	3	34	junction_1	434.664571825218	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCGTGCTGGATTTGT	NA	False	NA	18	True	AATAAA	-15	NA	32763142	32781117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763492_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32774112_32774334_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.32	chr3	+	2010	13	NIC	ENSMUSG00000027671.15	novel	922	8	NA	NA	-154	-1	intron_retention	FALSE	canonical	3	34	junction_1	396.370372533344	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCACTTATTCTTATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	32763158	32780921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763492_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.5	chr3	+	1659	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-84	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	396.726492337255	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGCTGGATTTGTCTG	NA	False	NA	21	True	AATAAA	-18	NA	32762829	32781120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766094_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.6	chr3	+	1573	11	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	443.249861816109	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCGTGCTGGATTTGT	NA	False	NA	18	True	AATAAA	-15	NA	32762829	32781117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32776768_32776865_32779395_32779483_32780670
ES.21327.7	chr3	+	6395	10	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-84	-1	intron_retention	FALSE	canonical	3	1234	junction_5	108.592112575363	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAAGCGTGCTGGATTTG	NA	False	NA	17	True	AATAAA	-14	NA	32762829	32781116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.8	chr3	+	4828	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	-84	5	intron_retention	FALSE	canonical	3	1234	junction_8	105.782369619054	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTGTGTGACT	NA	False	NA	28	True	AATAAA	-25	NA	32762829	32781127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21327.9	chr3	+	1673	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	176	161	-82	39	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGTCTATTTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	32762831	32780961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ES.21328.1	chr3	+	707	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	40	332	40	4	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGTGGCTGGTTCT	NA	False	NA	27	True	AATAAA	-29	NA	32791178	32805383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21328.2	chr3	+	1011	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	67	1	-14	-1	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCTTGCTTTACTTTTG	NA	False	NA	9	True	AATAAA	-23	NA	32791205	32805714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21328.3	chr3	+	674	6	NNC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1172.57620647871	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTCTGTGGCTGG	NA	False	NA	23	True	AATAAA	-25	NA	32791221	32805379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32791355_32798988_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21328.4	chr3	+	592	5	NIC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	1250.11089508091	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAAGATTCTGTGGCTG	NA	False	NA	22	True	AATAAA	-24	NA	32791221	32805378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32791355_32799002_32799092_32801876_32801939_32802609_32802717_32805177
ES.21328.5	chr3	+	507	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	84	488	-2	-24	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTATCAATTTCCAACC	NA	False	NA	NA	False	NA	NA	NA	32791222	32805227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21328.6	chr3	+	682	6	NIC	ENSMUSG00000027673.13	novel	1079	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	1165.38223772289	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTCTGTGGCTGG	NA	False	NA	23	True	AATAAA	-25	NA	32791224	32805379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32791380_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21328.7	chr3	+	4687	5	FSM	ENSMUSG00000027673.13	ENSMUST00000122290.2	625	5	-4061	-1	-900	1	multi-exon	FALSE	canonical	3	2854	junction_2	53.4836423591363	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTCTGTGGCTGGT	NA	False	NA	24	True	AATAAA	-26	NA	32794843	32805380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ES.21329.1	chr3	-	3086	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	378	-100	378	100	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCCGCTCCACCGTCGT	NA	False	NA	NA	False	NA	NA	NA	32790918	32779445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.10	chr3	-	4096	1	FSM	ENSMUSG00000037531.9	ENSMUST00000192021.2	1505	1	825	-3416	367	3416	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTCTAACTAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32790929	32786833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32786800_32790900
ES.21329.11	chr3	-	1406	3	ISM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	217	7288	217	3416	5prime_fragment	FALSE	canonical	3	685	junction_1	46	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTCTAACTAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32791079	32786833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_32787799_32788256_32788409_32790790
ES.21329.12	chr3	-	1654	2	NIC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	391	3380	intron_retention	FALSE	canonical	3	777	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32790905	32786869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32788409_32790790
ES.21329.13	chr3	-	1279	3	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	399	3380	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	384.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32790897	32786869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32787799_32788165_32788409_32790790
ES.21329.2	chr3	-	2963	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	399	2	399	-2	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATTCTCAAAAGTTC	NA	False	NA	NA	False	TATAAA	-12	NA	32790897	32779547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.3	chr3	-	2805	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	354	205	354	-205	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAGTGGTGTTCTAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	32790942	32779750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.4	chr3	-	2149	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	-66	1281	-66	897	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGATGGTCATCTTTT	NA	False	NA	NA	False	TATAAA	-7	NA	32791362	32780826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.6	chr3	-	902	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	363	2099	363	79	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTGTTCTTCTAGCTC	NA	False	NA	-10	True	TATAAA	-22	NA	32790933	32781644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.7	chr3	-	850	7	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	394	77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	272.735168656743	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTTGTTCTTCTAGC	NA	False	NA	-12	True	TATAAA	-20	NA	32790902	32781646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788403_32790803
ES.21329.8	chr3	-	760	6	NIC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	367	72	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	294.575626961906	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACATCAGTTGTTCTT	NA	False	NA	-17	True	TATAAA	-15	NA	32790929	32781651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_32781867_32782580_32782677_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ES.21329.9	chr3	-	982	8	NNC	ENSMUSG00000037531.9	novel	3364	7	NA	NA	378	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	329.773453468051	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACATCAGTTGTTCTT	NA	False	NA	-17	True	TATAAA	-15	NA	32790918	32781651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32789564_32789667_32790790
ES.2133.1	chr1	+	1451	10	Antisense	novelGene_ENSMUSG00000039349.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.314269680527354	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCGGGGTGCAGAGAT	NA	False	NA	NA	False	AGTAAA	-23	NA	184595858	184614484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_184595909_184596385_184596462_184596985_184597072_184600211_184600392_184605067_184605174_184607354_184607516_184609685_184609780_184610408_184610550_184611259_184611435_184614102
ES.21330.1	chr3	-	175	1	Intergenic	novelGene_17687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAAATTAATTGT	NA	False	NA	NA	False	NA	NA	NA	32817913	32817738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_32817700_32817900
ES.21331.1	chr3	+	3174	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-54	4460	-54	317	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGGTGGCATTGTGTC	NA	False	NA	NA	False	TTTAAA	-37	NA	32871640	32987760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.10	chr3	+	3488	11	NNC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	55	1968	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0004999875006	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGTTGTAAAATCCAT	NA	False	NA	14	True	AATAAA	-23	NA	32871774	32989411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32872022_32956094_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.11	chr3	+	4427	19	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	55	1968	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	7.87733896286065	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGTTGTAAAATCCAT	NA	False	NA	14	True	AATAAA	-23	NA	32871774	32989411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.12	chr3	+	3382	21	NNC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	57	643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	7.67723908706769	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTGGCCTCTAAGTG	NA	False	NA	NA	False	TTTAAA	-14	NA	32871776	32988086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971589_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.13	chr3	+	134	1	Intergenic	novelGene_17688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32892454	32892588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_32892500_32892600
ES.21331.14	chr3	+	5668	8	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	-9574	9	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	9.55755924781585	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGGCTCTTGTCTGTT	NA	False	NA	17	True	ATTAAA	-25	NA	32959577	32992229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.15	chr3	+	2433	1	ISM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	115916	2177	18459	-2177	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATCAATGTGGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	32987610	32990043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32987600_32990000
ES.21331.2	chr3	+	4264	20	ISM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-44	4757	-44	20	intron_retention	FALSE	canonical	3	18	junction_4	5.57447685830404	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAATAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32871650	32987463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806
ES.21331.3	chr3	+	4792	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-16	2804	-16	1973	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGTAAAATCCATATTAA	NA	False	NA	19	True	AATAAA	-28	NA	32871678	32989416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.4	chr3	+	2843	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	-7	4744	-7	33	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGTTGGGACAGCA	NA	False	NA	NA	False	NA	NA	NA	32871687	32987476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.5	chr3	+	2687	20	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	18	16	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	7.04162534750508	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAAATAAAGGA	NA	False	NA	NA	False	NA	NA	NA	32871737	32987459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.6	chr3	+	4516	19	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	19	1968	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	8.91471941354422	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGTTGTAAAATCCAT	NA	False	NA	14	True	AATAAA	-23	NA	32871738	32989411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32872022_32891984_32892111_32901958_32902020_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.7	chr3	+	7529	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	48	3	23	-3	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGTCCCTTTATGG	NA	False	NA	5	True	ATTAAA	-13	NA	32871742	32992217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.8	chr3	+	4585	20	NIC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	23	1956	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.82176804831632	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTGCAAACTCAATGT	NA	False	NA	2	True	AATAAA	-11	NA	32871742	32989399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_32872022_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21331.9	chr3	+	2373	18	NNC	ENSMUSG00000056900.14	novel	7580	21	NA	NA	23	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.0766439647797	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGTTGGGACAGCA	NA	False	NA	NA	False	NA	NA	NA	32871742	32987476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_32872022_32891984_32892111_32901956_32902020_32908704_32908827_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ES.21332.1	chr3	-	4071	13	NIC	ENSMUSG00000027674.17	novel	2721	15	NA	NA	-38	1	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTCCTGAGTTCCGT	NA	False	NA	NA	False	AATACA	-16	NA	33197434	33003781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060196_33061270_33061466_33069113_33069226_33134613_33134686_33196997
ES.21332.2	chr3	-	4190	7	NNC	ENSMUSG00000027674.17	novel	1187	8	NA	NA	23470	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGTGTTATTATACTA	NA	False	NA	NA	False	AATAAA	-14	NA	33015758	33004779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_33005023_33006619_33006778_33007184_33007697_33008476_33008675_33009910_33009982_33010821_33010966_33012894
ES.21333.1	chr3	+	270	1	Intergenic	novelGene_17689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAAATATTAAATCCA	4443	False	NA	NA	False	NA	NA	NA	33811723	33811993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_33811700_33812000
ES.21334.1	chr3	+	179	1	Intergenic	novelGene_17690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGACTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	33848894	33849073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_33848900_33849100
ES.21335.1	chr3	+	3665	11	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-45	970	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	56.2974244526337	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTTCAACATTTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	33854278	33865063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862834
ES.21335.10	chr3	+	1214	2	NIC	ENSMUSG00000027677.18	novel	680	3	NA	NA	-7	0	intron_retention	FALSE	canonical	3	199	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	33854316	33855640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33855230_33855339
ES.21335.11	chr3	+	5461	11	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	-7	959	intron_retention	FALSE	canonical	2	24	junction_2	64.0059372246044	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTCATAATCACTTC	NA	False	NA	NA	False	AATAAA	-11	NA	33854316	33865052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.12	chr3	+	4532	9	FSM	ENSMUSG00000027677.18	ENSMUST00000196975.5	1711	9	-95	-2726	-7	279	multi-exon	FALSE	canonical	3	18	junction_5	55.9741848980403	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTAACCCTTTGAGAAT	NA	False	NA	80	True	CATAAA	-19	NA	33854316	33864372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.13	chr3	+	3604	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-7	345	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	54.0434474740096	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCAGAGAAGATTTCT	NA	False	NA	NA	False	AATAGA	-21	NA	33854316	33864438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.14	chr3	+	6733	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-78	-3971	-2	-945	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCTGCCTCTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	33854321	33868064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.15	chr3	+	2923	13	NIC	ENSMUSG00000027677.18	novel	2438	12	NA	NA	-1	86	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	69.0886608319741	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854322	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.16	chr3	+	4679	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	342	4640	-1	276	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCTAACCCTTTGAG	NA	False	NA	77	True	CATAAA	-16	NA	33854322	33864369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.17	chr3	+	2873	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-71	-118	-3	118	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTTGATGCAGATGGTT	NA	False	NA	43	True	GATAAA	-17	NA	33854328	33864211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.18	chr3	+	4316	11	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	0	96	intron_retention	FALSE	canonical	2	24	junction_2	64.0059372246044	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGTTTCTGAGTACT	NA	False	NA	NA	False	NA	NA	NA	33854331	33863922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.19	chr3	+	1460	11	NNC	ENSMUSG00000027677.18	novel	2438	12	NA	NA	0	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.2974244526337	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854331	33861859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861782
ES.21335.2	chr3	+	2285	11	NIC	ENSMUSG00000027677.18	novel	2724	10	NA	NA	-24	-189	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	64.0059372246044	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854299	33861859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.20	chr3	+	3720	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-68	-968	0	968	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACTTCAACATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	33854331	33865061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.21	chr3	+	3424	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	87	combination_of_known_junctions	FALSE	canonical	2	14	junction_11	70.5909578723319	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854331	33864180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.22	chr3	+	1781	11	NNC	ENSMUSG00000027677.18	novel	2438	12	NA	NA	-4	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.2974244526337	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854335	33861859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861457
ES.21335.23	chr3	+	2803	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-4	-38	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	66.8561370074248	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATTCTGTTTTTTTGTT	NA	False	NA	NA	False	AAGAAA	-1	NA	33854335	33864055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.24	chr3	+	4216	11	NNC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-4	87	intron_retention	FALSE	canonical	0	0	junction_10	56.2974244526337	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854335	33864180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33862574_33862834
ES.21335.25	chr3	+	3263	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	281	intron_retention	FALSE	canonical	2	24	junction_1	61.0008806331231	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAACCCTTTGAGAATTT	NA	False	NA	82	True	CATAAA	-21	NA	33854339	33864374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.26	chr3	+	8357	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	360	944	1	-944	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCTCTGCCTCTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	33854340	33868065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.27	chr3	+	1302	1	FSM	ENSMUSG00000027677.18	ENSMUST00000199523.2	696	1	17	-623	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	33854340	33855642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854300_33855600
ES.21335.28	chr3	+	5368	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-59	-2625	1	278	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTTGTTCGCTTATTT	NA	False	NA	NA	False	AAAACA	-9	NA	33854340	33866718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.29	chr3	+	2672	11	FSM	ENSMUSG00000027677.18	ENSMUST00000117915.8	4913	11	-21	2262	1	85	multi-exon	FALSE	canonical	3	18	junction_5	63.6361532464055	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTAAGTGATAAATTA	NA	False	NA	10	True	ATTAAA	-16	NA	33854340	33864178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.30	chr3	+	4615	11	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	1	967	intron_retention	FALSE	canonical	3	90	junction_10	31.6291005246751	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCACTTCAACATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	33854340	33865060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33862098_33862834
ES.21335.31	chr3	+	4387	9	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	1	87	intron_retention	FALSE	canonical	3	9	junction_3	59.027535947217	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854340	33864180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.33	chr3	+	2575	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-59	168	1	99	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTCTGAGTACTTTG	NA	False	NA	NA	False	NA	NA	NA	33854340	33863925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.34	chr3	+	10408	9	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	360	946	1	-946	intron_retention	FALSE	canonical	3	147	junction_6	18.6509885796973	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTCTCTGCCTCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	33854340	33868063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788
ES.21335.35	chr3	+	2711	11	NNC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	3	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.2974244526337	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854342	33864180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862841
ES.21335.37	chr3	+	4559	11	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	4	84	intron_retention	FALSE	canonical	2	24	junction_2	64.0059372246044	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTTAAGTGATAAATT	NA	False	NA	9	True	ATTAAA	-15	NA	33854343	33864177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.38	chr3	+	6120	12	NNC	ENSMUSG00000027677.18	novel	2438	12	NA	NA	5	1059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.5801044442629	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTTTCAAAAACAGAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	33854344	33867499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855109_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857601_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.39	chr3	+	4451	11	ISM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-55	-975	5	975	intron_retention	FALSE	canonical	3	43	junction_10	44.1725027590695	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAACATTTGTTTTTTAC	NA	False	NA	NA	False	AATAAA	-27	NA	33854344	33865068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987
ES.21335.4	chr3	+	4254	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	320	5087	-23	96	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGTTTCTGAGTACT	NA	False	NA	NA	False	NA	NA	NA	33854300	33863922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.40	chr3	+	3313	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	5	82	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	54.0434474740096	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTTTTAAGTGATAAA	NA	False	NA	7	True	ATTAAA	-13	NA	33854344	33864175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.41	chr3	+	4467	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	364	4830	5	86	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854344	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.42	chr3	+	4521	10	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	5	203	intron_retention	FALSE	canonical	2	18	junction_6	76.9513233988832	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCCTGTTTTATTT	NA	False	NA	4	True	NA	NA	NA	33854344	33864296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.43	chr3	+	5868	9	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	5	968	intron_retention	FALSE	canonical	3	147	junction_5	18.1779399272855	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACTTCAACATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	33854344	33865061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.44	chr3	+	4283	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	5	959	combination_of_known_junctions	FALSE	canonical	2	14	junction_11	70.5909578723319	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTCATAATCACTTC	NA	False	NA	NA	False	AATAAA	-11	NA	33854344	33865052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.45	chr3	+	3754	11	ISM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-55	-278	5	278	intron_retention	FALSE	canonical	3	43	junction_10	44.1725027590695	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACCTAACCCTTTGAGAA	NA	False	NA	79	True	CATAAA	-18	NA	33854344	33864371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987
ES.21335.46	chr3	+	4984	9	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	5	84	intron_retention	FALSE	canonical	3	147	junction_5	18.1779399272855	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTTAAGTGATAAATT	NA	False	NA	9	True	ATTAAA	-15	NA	33854344	33864177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.47	chr3	+	4198	9	ISM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-17	1969	5	-191	intron_retention	FALSE	canonical	3	147	junction_6	18.6509885796973	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTCTGGTGATTCGGT	NA	False	NA	0	True	AATATA	-14	NA	33854344	33861857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788
ES.21335.48	chr3	+	4718	8	NIC	ENSMUSG00000027677.18	novel	2724	10	NA	NA	6	-189	intron_retention	FALSE	canonical	3	147	junction_5	18.8441513689613	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854345	33861859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788
ES.21335.5	chr3	+	3586	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-93	-809	-17	809	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTTTCTACCAGTAA	NA	False	NA	NA	False	AATAAA	-14	NA	33854306	33864902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.50	chr3	+	3033	13	NNC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	9	207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.9453526001214	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCTGTTTTATTTCTCC	NA	False	NA	8	True	NA	NA	NA	33854348	33864300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33854732_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.51	chr3	+	3546	11	FSM	ENSMUSG00000027677.18	ENSMUST00000117915.8	4913	11	-13	1380	9	967	multi-exon	FALSE	canonical	3	18	junction_5	63.6361532464055	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCACTTCAACATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	33854348	33865060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.52	chr3	+	6515	9	ISM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-50	-86	-9	86	intron_retention	FALSE	canonical	3	147	junction_6	18.6509885796973	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854349	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788
ES.21335.53	chr3	+	5090	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-49	-2357	-8	10	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCCAGTGTAAATTTAA	NA	False	NA	NA	False	AATAAA	-43	NA	33854350	33866450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.54	chr3	+	3151	11	NIC	ENSMUSG00000027677.18	novel	4913	11	NA	NA	-4	86	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	68.5609947419085	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854354	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.55	chr3	+	4343	9	FSM	ENSMUSG00000027677.18	ENSMUST00000196975.5	1711	9	-57	-2575	-4	128	multi-exon	FALSE	canonical	3	18	junction_5	55.9741848980403	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGGTTTGTGAACACT	NA	False	NA	53	True	GATAAA	-27	NA	33854354	33864221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.56	chr3	+	5399	11	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	1	130	intron_retention	FALSE	canonical	3	14	junction_9	56.5123880224504	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTTTGTGAACACTTG	NA	False	NA	55	True	GATAAA	-29	NA	33854359	33864223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33861575_33861987_33862098_33862834
ES.21335.57	chr3	+	4151	11	NNC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	1	203	intron_retention	FALSE	canonical	0	0	junction_9	71.2997194945394	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGCCTGTTTTATTT	NA	False	NA	4	True	NA	NA	NA	33854359	33864296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860969_33861575_33861987
ES.21335.58	chr3	+	3675	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-2	-1235	1	968	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACTTCAACATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	33854359	33865061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.59	chr3	+	9209	9	NNC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	1	17	intron_retention	FALSE	canonical	0	0	junction_8	78.2447082875257	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGAATTTTTTGTCGT	NA	False	NA	NA	False	AATAAA	-41	NA	33854359	33869026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860969
ES.21335.6	chr3	+	5383	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	334	3944	-9	972	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCAACATTTGTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	33854314	33865065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.60	chr3	+	4325	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	379	4957	1	-41	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTATTCTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	33854359	33864052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.61	chr3	+	2017	11	NIC	ENSMUSG00000027677.18	novel	2724	10	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	64.0059372246044	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTGTTTACATTTTC	NA	False	NA	NA	False	NA	NA	NA	33854360	33861652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.62	chr3	+	2131	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	380	7150	-1	-189	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGGTGATTCGGTTA	NA	False	NA	2	True	AATATA	-16	NA	33854360	33861859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.64	chr3	+	2914	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	99	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	66.8561370074248	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGACTTAATGTCTA	NA	False	NA	24	True	ATTAAA	-30	NA	33854361	33864192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.65	chr3	+	4912	11	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	961	intron_retention	FALSE	canonical	3	14	junction_10	52.3090814295185	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCATAATCACTTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	33854361	33865054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987
ES.21335.67	chr3	+	3017	10	NIC	ENSMUSG00000027677.18	novel	4913	11	NA	NA	5	87	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	78.1073967822431	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGATAAATTATG	NA	False	NA	12	True	ATTAAA	-18	NA	33854366	33864180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33860964_33861575_33861987_33862098_33862834
ES.21335.69	chr3	+	3770	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	9	964	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	66.8561370074248	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATAATCACTTCAACAT	NA	False	NA	NA	False	AATAAA	-16	NA	33854370	33865057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.7	chr3	+	4520	6	ISM	ENSMUSG00000027677.18	ENSMUST00000196975.5	1711	9	-96	-212	-8	-190	intron_retention	FALSE	canonical	3	18	junction_5	66.2751838926155	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTCTGGTGATTCGGTT	NA	False	NA	1	True	AATATA	-15	NA	33854315	33861858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148
ES.21335.70	chr3	+	3534	11	ISM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-27	-86	11	86	intron_retention	FALSE	canonical	3	43	junction_10	44.1725027590695	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854372	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987
ES.21335.74	chr3	+	2771	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	20	-353	-18	86	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854381	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.75	chr3	+	2513	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	20	-95	-18	95	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATAGTTTCTGAGTAC	NA	False	NA	NA	False	NA	NA	NA	33854381	33863921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.76	chr3	+	2851	11	NNC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-11	273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.2974244526337	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGACCTAACCCTTT	NA	False	NA	74	True	CATAAA	-13	NA	33854388	33864366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862841
ES.21335.77	chr3	+	3328	10	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-10	959	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	68.9993737670634	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTCATAATCACTTC	NA	False	NA	NA	False	AATAAA	-11	NA	33854389	33865052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.78	chr3	+	4004	11	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	-5	86	intron_retention	FALSE	canonical	3	14	junction_10	52.3090814295185	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAGTGATAAATTAT	NA	False	NA	11	True	ATTAAA	-17	NA	33854394	33864179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987
ES.21335.79	chr3	+	4303	10	NIC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	-4	36	intron_retention	FALSE	canonical	2	18	junction_6	76.9513233988832	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATTTTCAATCATTTG	NA	False	NA	-39	True	AATATA	-19	NA	33854395	33864129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.8	chr3	+	5217	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	335	4109	-8	807	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTTTCTACCAGT	NA	False	NA	NA	False	AATAAA	-12	NA	33854315	33864900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ES.21335.80	chr3	+	4659	11	NNC	ENSMUSG00000027677.18	novel	9661	10	NA	NA	19	276	intron_retention	FALSE	canonical	0	0	junction_10	77.5776385307003	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCTAACCCTTTGAG	NA	False	NA	77	True	CATAAA	-16	NA	33854430	33864369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860969
ES.21335.81	chr3	+	3409	12	NNC	ENSMUSG00000027677.18	novel	2724	10	NA	NA	190	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.9966941368137	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGAGCCTGTTTTATT	NA	False	NA	3	True	NA	NA	NA	33854601	33864295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33854824_33855109_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
ES.21335.82	chr3	+	2264	10	ISM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	1027	-224	26	-43	3prime_fragment	FALSE	canonical	3	25	junction_8	54.7884821634783	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTTATTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	33855388	33864050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.83	chr3	+	5695	5	ISM	ENSMUSG00000027677.18	ENSMUST00000117915.8	4913	11	4207	-1617	1880	-952	3prime_fragment	FALSE	canonical	3	43	junction_3	64.0897807766574	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTCATTGTCTCTGC	NA	False	NA	NA	False	AATAAA	-12	NA	33858568	33868057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ES.21335.84	chr3	+	5258	1	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	8259	1512	5551	1057	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTCTTTCAAAAACAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	33862239	33867497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33862200_33867500
ES.21335.85	chr3	+	2785	1	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	10116	2128	7408	441	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	TATAAA	-42	NA	33864096	33866881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33864100_33866900
ES.21335.86	chr3	+	2392	1	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	10625	2012	7917	557	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTGTTCTTTTCTCA	NA	False	NA	NA	False	AATAAA	-27	NA	33864605	33866997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33864600_33867000
ES.21335.87	chr3	+	2230	1	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	10971	1828	8263	741	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCATGTTCATTT	NA	False	NA	NA	False	TATAAA	-14	NA	33864951	33867181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_33865000_33867200
ES.21335.88	chr3	+	4309	1	Genic_Genomic	ENSMUSG00000027677.18	novel	NA	NA	NA	NA	9802	1790	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTTTTCCACTTCTA	NA	False	NA	NA	False	NA	NA	NA	33866490	33870799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_33866500_33870800
ES.21335.89	chr3	+	3688	1	Genic_Genomic	ENSMUSG00000027677.18	novel	NA	NA	NA	NA	10939	2306	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTAGTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	33867627	33871315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_33867600_33871300
ES.21335.9	chr3	+	3032	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	-45	-549	-7	282	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACCCTTTGAGAATTTT	NA	False	NA	83	True	CATAAA	-22	NA	33854316	33864375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ES.21335.90	chr3	+	10127	2	NNC	ENSMUSG00000105286.2	novel	456	2	NA	NA	-164	10171	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33871240	33882266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_33879707_33880605
ES.21336.1	chr3	-	835	1	Antisense	novelGene_ENSMUSG00000027677.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACGAGTCTCTTTTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	33865737	33864902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_33864900_33865700
ES.21337.1	chr3	-	3349	20	FSM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	43	214	43	-214	multi-exon	FALSE	canonical	0	0	junction_3	3.55720952604543	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTCTTCAGATGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	33898407	33866724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_33867350_33868338_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
ES.21337.3	chr3	-	2925	11	ISM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	23	11715	23	509	5prime_fragment	FALSE	canonical	2	2	junction_3	3.52278299076171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTATTTTATTTATG	NA	False	NA	NA	False	NA	NA	NA	33898427	33878225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
ES.21337.4	chr3	-	1805	11	ISM	ENSMUSG00000027676.12	ENSMUST00000029222.8	3606	20	43	12815	43	-591	5prime_fragment	FALSE	canonical	2	2	junction_3	3.52278299076171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGATGATTATACTTA	NA	False	NA	NA	False	NA	NA	NA	33898407	33879325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
ES.21337.5	chr3	-	1703	10	NIC	ENSMUSG00000027676.12	novel	3606	20	NA	NA	25	-591	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	4.21637021355784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGATGATTATACTTA	NA	False	NA	NA	False	NA	NA	NA	33898425	33879325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33898253
ES.21337.6	chr3	-	2868	6	ISM	ENSMUSG00000027676.12	ENSMUST00000200300.5	2630	13	6	16039	6	3307	5prime_fragment	FALSE	canonical	2	4	junction_4	4.02988833592198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATATTTGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-12	NA	33898444	33888835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_33890994_33891088_33891182_33891954_33892114_33893226_33893374_33895217_33895338_33898253
ES.21337.7	chr3	-	1503	3	FSM	ENSMUSG00000027676.12	ENSMUST00000197230.2	1557	3	52	2	43	-2	multi-exon	FALSE	canonical	2	4	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTCTCTCCTGTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	33898407	33892144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_33893374_33895217_33895338_33898253
ES.21338.1	chr3	-	2147	1	FSM	ENSMUSG00000044434.6	ENSMUST00000060997.6	447	1	-1462	-238	-1462	238	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	34061074	34058927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_34058900_34061100
ES.21339.1	chr3	-	601	1	Intergenic	novelGene_17691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAACAATAAATAAGTAA	7711	False	NA	NA	False	NA	NA	NA	34073590	34072989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34073000_34073600
ES.2134.1	chr1	-	1650	1	ISM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	9643	0	9643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTGTGCCTTCCCT	7141	False	NA	-3	True	AATAAA	-28	NA	184605772	184604122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_184604100_184605800
ES.21340.1	chr3	+	2328	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-202	3	-37	0	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	4657	False	NA	17	True	ATTAAA	-20	NA	34074054	34123491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.10	chr3	+	2222	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4841	False	NA	14	True	ATTAAA	-17	NA	34074238	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ES.21340.101	chr3	+	7430	1	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	15275	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	713	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAAATGTTATTTTGT	NA	False	NA	11	True	ATTAAA	-14	NA	34116055	34123485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34116100_34123500
ES.21340.102	chr3	+	1516	2	ISM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	43297	-169	16770	143	3prime_fragment	FALSE	canonical	3	506	junction_1	0	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTGTAATTTCTTCA	NA	False	NA	NA	False	AATGAA	-20	NA	34117550	34123663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34118469_34123065
ES.21340.103	chr3	+	4518	1	NIC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	18822	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	728	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	NA	False	NA	9	True	AATAAA	-13	NA	34119602	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34119600_34124100
ES.21340.104	chr3	+	3093	1	Genic_Genomic	ENSMUSG00000027680.16	novel	NA	NA	NA	NA	20710	112	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGAAGACTTAATTTTAT	NA	False	NA	10	True	ATTAAA	-18	NA	34121490	34124583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34121500_34124600
ES.21340.105	chr3	+	3633	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	-1744	3453	-1744	-3453	mono-exon	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGTTGGTGTTAGCCG	NA	False	NA	3	True	AATAAA	-17	NA	34123063	34126696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34123100_34126700
ES.21340.106	chr3	+	6831	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	-1431	-58	-1431	58	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTTTGCTGGTCATCTC	NA	False	NA	NA	False	CATAAA	-15	NA	34123376	34130207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34123400_34130200
ES.21340.107	chr3	+	1570	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	-1280	5052	-1280	-5052	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGTGTTTTACCATT	NA	False	NA	NA	False	NA	NA	NA	34123527	34125097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34123500_34125100
ES.21340.11	chr3	+	2136	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-15	6	-8	2	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4841	False	NA	14	True	ATTAAA	-17	NA	34074238	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.12	chr3	+	3069	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-18	3583	-8	-3575	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCATTCTTTCCAAAA	4841	False	NA	11	True	AATAAA	-20	NA	34074238	34119911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.13	chr3	+	3108	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-7	-348	intron_retention	FALSE	canonical	3	754	junction_14	166.469483356226	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATTTTTAACTTTCTA	4842	False	NA	12	True	AATAAA	-16	NA	34074239	34124123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.14	chr3	+	5481	13	NIC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-6	-3581	intron_retention	FALSE	canonical	3	1060	junction_6	82.628813578154	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	4843	False	NA	5	True	AATAAA	-14	NA	34074240	34119905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ES.21340.15	chr3	+	3066	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-3	117	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	330.912972782204	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTAATTTTATTAAGC	4846	False	NA	15	True	ATTAAA	-23	NA	34074243	34124588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34123065
ES.21340.16	chr3	+	2095	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_13	321.704827588505	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATAGGAAATGTTATTTT	4846	False	NA	9	True	ATTAAA	-12	NA	34074243	34123483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116012_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.17	chr3	+	2965	15	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-2	-3579	intron_retention	FALSE	canonical	2	128	junction_14	288.930893510005	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4847	False	NA	7	True	AATAAA	-16	NA	34074244	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118361
ES.21340.18	chr3	+	2812	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	3833	-1	-3825	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCATGTTAATGTTTTTG	4848	False	NA	NA	False	AATAAA	-30	NA	34074245	34119661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.19	chr3	+	2754	16	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	-351	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	328.731028180926	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	4848	False	NA	9	True	AATAAA	-13	NA	34074245	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112318_34116012_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.2	chr3	+	2954	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-185	-640	-20	-337	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTACTTGTTATGCC	4674	False	NA	23	True	AATAAA	-27	NA	34074071	34124134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.20	chr3	+	2195	15	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	4450	-1	-4442	5prime_fragment	FALSE	canonical	3	1060	junction_7	79.2243005391551	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGGAAAGAAATTTTT	4848	False	NA	NA	False	ATTAAA	-21	NA	34074245	34119044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.21	chr3	+	2055	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	307.253858549815	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4848	False	NA	13	True	ATTAAA	-16	NA	34074245	34123487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.22	chr3	+	2155	18	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	454.701194709876	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4848	False	NA	14	True	ATTAAA	-17	NA	34074245	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34075700_34075800_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.23	chr3	+	2384	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-1	131	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTGCACTGAATT	4848	False	NA	NA	False	AATGAA	-8	NA	34074245	34123651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.24	chr3	+	6065	15	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	780	junction_14	136.319851968876	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	4848	False	NA	17	True	ATTAAA	-20	NA	34074245	34123491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34122402_34123065
ES.21340.25	chr3	+	2783	17	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-1	-341	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	422.802882373985	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACTTTCTACTTGTTA	4848	False	NA	19	True	AATAAA	-23	NA	34074245	34124130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34075700_34075800_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.26	chr3	+	2680	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-11	345	-1	-345	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTAACTTTCTACTT	4848	False	NA	15	True	AATAAA	-19	NA	34074245	34124126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.27	chr3	+	3361	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-11	-336	-1	336	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTAGATGTGTGTAGC	4848	False	NA	NA	False	TATAAA	-32	NA	34074245	34124807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.3	chr3	+	2184	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-149	979	16	1	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTATTTTGTTTTCAAA	4710	False	NA	18	True	ATTAAA	-21	NA	34074107	34123492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.30	chr3	+	4221	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	2	intron_retention	FALSE	canonical	3	754	junction_14	168.004232750911	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4848	False	NA	14	True	ATTAAA	-17	NA	34074245	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34118469_34122309_34122402_34123065
ES.21340.32	chr3	+	2688	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	-351	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	307.253858549815	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	4848	False	NA	9	True	AATAAA	-13	NA	34074245	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.33	chr3	+	3051	15	NNC	ENSMUSG00000027680.16	novel	2127	15	NA	NA	-1	-3585	intron_retention	FALSE	canonical	0	0	junction_12	321.824898518002	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACCAATTTTTGCATT	4848	False	NA	1	True	AATAAA	-10	NA	34074245	34119901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112237_34112324_34112381_34115976_34116181_34118267
ES.21340.35	chr3	+	4290	14	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	4442	-1	-4434	intron_retention	FALSE	canonical	3	1060	junction_7	81.7515358232948	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTTTGTTTGTT	4848	False	NA	NA	False	ATTAAA	-29	NA	34074245	34119052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ES.21340.36	chr3	+	5249	16	FSM	ENSMUSG00000027680.16_ENSMUSG00000105176.2	ENSMUST00000200392.5	3014	16	-11	-2224	-1	2224	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAGTTGGTGTTAGCC	4848	False	NA	2	True	AATAAA	-16	NA	34074245	34126695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.37	chr3	+	3051	15	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-1	-3579	intron_retention	FALSE	canonical	3	8	junction_12	319.828015007556	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4848	False	NA	7	True	AATAAA	-16	NA	34074245	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112324_34112381_34115976_34116181_34118267
ES.21340.38	chr3	+	1798	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	342	-1	-334	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCGTACTCTGGGAGAAGA	4848	False	NA	58	True	AATAAA	-41	NA	34074245	34123152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.39	chr3	+	3229	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-11	-1089	-1	112	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGAAGACTTAATTTTAT	4848	False	NA	10	True	ATTAAA	-18	NA	34074245	34124583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.4	chr3	+	2986	18	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	16	-350	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4710	False	NA	10	True	AATAAA	-14	NA	34074107	34124121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ES.21340.40	chr3	+	5721	15	NNC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	0	1	intron_retention	FALSE	canonical	2	128	junction_12	314.401739946891	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4849	False	NA	13	True	ATTAAA	-16	NA	34074246	34123487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34116181_34118361_34118469_34122309_34122402_34123065
ES.21340.41	chr3	+	3133	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-10	-109	0	109	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCGGAAGACTTAATTT	4849	False	NA	7	True	ATTAAA	-15	NA	34074246	34124580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.42	chr3	+	2847	16	NNC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	1	-353	intron_retention	FALSE	canonical	0	0	junction_8	332.551643441369	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGCTGATTTTTAACT	4850	False	NA	7	True	AATAAA	-11	NA	34074247	34124118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104225_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.43	chr3	+	3153	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	2	-3580	intron_retention	FALSE	canonical	2	5	junction_1	414.966697458965	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATTTTTGCATTCTTTC	4851	False	NA	6	True	AATAAA	-15	NA	34074248	34119906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34075700_34075800_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.46	chr3	+	3384	14	NIC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-3	-3581	intron_retention	FALSE	canonical	3	1060	junction_6	80.0388219413022	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	4853	False	NA	5	True	AATAAA	-14	NA	34074250	34119905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.47	chr3	+	3198	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAAGCAGTTTTTAATA	4854	False	NA	15	True	ATTAAA	-16	NA	34074251	34124471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.48	chr3	+	3014	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-5	5	-2	-5	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGGTAAGCAGTTTT	4854	False	NA	10	True	ATTAAA	-11	NA	34074251	34124466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.50	chr3	+	4122	15	NIC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-2	1	intron_retention	FALSE	canonical	3	506	junction_14	197.065046756296	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGTTATTTTGTTT	4854	False	NA	13	True	ATTAAA	-16	NA	34074251	34123487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34118469_34123065
ES.21340.51	chr3	+	3123	16	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-2	111	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	329.586704154697	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCGGAAGACTTAATTTTA	4854	False	NA	9	True	ATTAAA	-17	NA	34074251	34124582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34116012_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.52	chr3	+	2858	18	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	-1	-351	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	400.325766998807	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	4855	False	NA	9	True	AATAAA	-13	NA	34074252	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34075700_34075800_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.53	chr3	+	2290	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-4	-157	-1	131	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTGCACTGAATT	4855	False	NA	NA	False	AATGAA	-8	NA	34074252	34123651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.55	chr3	+	4941	15	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-1	-350	intron_retention	FALSE	canonical	2	5	junction_1	444.736318347336	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGATTTTTAACTTTC	4855	False	NA	10	True	AATAAA	-14	NA	34074252	34124121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34075700_34075800_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34118469_34123065
ES.21340.56	chr3	+	8774	14	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-1	-351	intron_retention	FALSE	canonical	3	780	junction_13	140.427917452336	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	4855	False	NA	9	True	AATAAA	-13	NA	34074252	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34122402_34123065
ES.21340.59	chr3	+	2106	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	321.054603757289	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTATTTTGTTTTC	4856	False	NA	15	True	ATTAAA	-18	NA	34074253	34123489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100714_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.6	chr3	+	5153	14	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-19	3587	-9	-3579	intron_retention	FALSE	canonical	3	1060	junction_7	81.7515358232948	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4840	False	NA	7	True	AATAAA	-16	NA	34074237	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ES.21340.61	chr3	+	1940	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	128	junction_14	319.633679215581	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4856	False	NA	14	True	ATTAAA	-17	NA	34074253	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118361_34118469_34123065
ES.21340.62	chr3	+	2770	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	-354	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	319.645207368654	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGCTGATTTTTAAC	4856	False	NA	6	True	AATAAA	-10	NA	34074253	34124117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100570_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.63	chr3	+	3194	15	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	0	-3433	intron_retention	FALSE	canonical	0	0	junction_8	321.622552577599	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGTTTGTGTTTAAAA	4856	False	NA	NA	False	AGTAAA	-19	NA	34074253	34120053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104225_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.64	chr3	+	8052	15	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	780	junction_14	135.355013175858	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	4856	False	NA	12	True	ATTAAA	-15	NA	34074253	34123486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34122402_34123065
ES.21340.65	chr3	+	2592	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	0	-347	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	330.912972782204	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATTTTTAACTTTCTAC	4856	False	NA	13	True	AATAAA	-17	NA	34074253	34124124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34123065
ES.21340.66	chr3	+	2046	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	343.347287742309	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAAATGTTATTTTGT	4856	False	NA	11	True	ATTAAA	-14	NA	34074253	34123485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100570_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.67	chr3	+	5973	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	780	junction_15	131.710524341156	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4856	False	NA	20	True	ATTAAA	-23	NA	34074253	34123494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34122402_34123065
ES.21340.68	chr3	+	4197	16	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	332.657955797777	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATAGGAAATGTTATTTT	4856	False	NA	9	True	ATTAAA	-12	NA	34074253	34123483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104292_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34118469_34122309_34122402_34123065
ES.21340.69	chr3	+	3137	14	ISM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	0	3587	0	-3579	5prime_fragment	FALSE	canonical	3	1060	junction_7	81.9770497541265	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4856	False	NA	7	True	AATAAA	-16	NA	34074253	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267
ES.21340.7	chr3	+	2861	18	NNC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	-9	-351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	455.32796651801	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	4840	False	NA	9	True	AATAAA	-13	NA	34074237	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112387_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ES.21340.71	chr3	+	3097	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	1	-971	1	-6	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATGGTAAGCAGTTT	4857	False	NA	9	True	ATTAAA	-10	NA	34074254	34124465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.72	chr3	+	4297	15	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	754	junction_13	173.560140726434	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	4857	False	NA	12	True	ATTAAA	-15	NA	34074254	34123486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34118469_34122309_34122402_34123065
ES.21340.73	chr3	+	2212	16	NIC	ENSMUSG00000027680.16	novel	2459	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTATTTTGTTTT	4857	False	NA	14	True	ATTAAA	-17	NA	34074254	34123488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.75	chr3	+	6196	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	754	junction_14	168.857020385098	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTATTTTGTTTTCAA	4857	False	NA	17	True	ATTAAA	-20	NA	34074254	34123491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.76	chr3	+	3125	16	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	1	-3579	intron_retention	FALSE	canonical	0	0	junction_14	417.428444965921	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	4857	False	NA	7	True	AATAAA	-16	NA	34074254	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34116256_34116333_34118267
ES.21340.77	chr3	+	3725	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	754	junction_14	167.538201282242	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGGAAATGTTATTTTG	4860	False	NA	10	True	ATTAAA	-13	NA	34074257	34123484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.78	chr3	+	4108	15	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_12	354.979073829913	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	4860	False	NA	12	True	ATTAAA	-15	NA	34074257	34123486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112324_34112381_34115976_34118469_34123065
ES.21340.79	chr3	+	2615	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	24	-353	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_4	317.765809008773	749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGCTGATTTTTAACT	4883	False	NA	7	True	AATAAA	-11	NA	34074280	34124118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100699_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.8	chr3	+	3127	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	-19	-979	-9	2	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGCAGTTTTTAATAGG	4840	False	NA	17	True	ATTAAA	-18	NA	34074237	34124473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.80	chr3	+	2754	1	Intergenic	novelGene_17693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTGTGTAAGAATAAAA	NA	False	NA	NA	False	NA	NA	NA	34088659	34091413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_34088700_34091400
ES.21340.81	chr3	+	2937	18	NNC	ENSMUSG00000027680.16	novel	646	3	NA	NA	-3505	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.2821142424	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAAATGTTATTTTGT	NA	False	NA	11	True	ATTAAA	-14	NA	34090174	34123485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34090927_34093262_34093384_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ES.21340.82	chr3	+	3728	15	NNC	ENSMUSG00000027680.16	novel	646	3	NA	NA	-3490	-3579	intron_retention	FALSE	canonical	1	2	junction_1	320.978804373658	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	NA	False	NA	7	True	AATAAA	-16	NA	34090189	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34090927_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.83	chr3	+	2116	16	NNC	ENSMUSG00000027680.16	novel	646	3	NA	NA	-441	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	346.659717879075	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGGAAATGTTATTTTG	NA	False	NA	10	True	ATTAAA	-13	NA	34093238	34123484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34093384_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.84	chr3	+	1975	15	ISM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	19417	985	-6	0	3prime_fragment	FALSE	canonical	3	506	junction_14	197.806453021995	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	34093673	34123486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.85	chr3	+	2072	14	ISM	ENSMUSG00000027680.16	ENSMUST00000167354.8	1986	15	20990	-177	1554	143	3prime_fragment	FALSE	canonical	3	506	junction_13	204.695097255007	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTGTAATTTCTTCA	NA	False	NA	NA	False	AATGAA	-20	NA	34095236	34123663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.86	chr3	+	2461	13	ISM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	25923	351	-601	-351	3prime_fragment	FALSE	canonical	3	506	junction_12	199.974581718111	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGATTTTTAACTTT	NA	False	NA	9	True	AATAAA	-13	NA	34100179	34124120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.88	chr3	+	2181	12	NNC	ENSMUSG00000027680.16	novel	3014	16	NA	NA	-68	-337	at_least_one_novel_splicesite	FALSE	canonical	2	128	junction_10	346.515333041783	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTACTTGTTATGCC	NA	False	NA	23	True	AATAAA	-27	NA	34100712	34124134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118361_34118469_34123065
ES.21340.89	chr3	+	2528	9	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	27523	3589	999	-3581	internal_fragment	FALSE	canonical	3	1060	junction_1	63.5284139184979	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	NA	False	NA	5	True	AATAAA	-14	NA	34101779	34119905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.9	chr3	+	4346	9	ISM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	-16	15750	-9	4480	5prime_fragment	FALSE	canonical	3	1060	junction_7	90.6514616539634	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCTCCATGTTACCTT	4840	False	NA	NA	False	NA	NA	NA	34074237	34107744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223
ES.21340.90	chr3	+	7833	5	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	30530	3587	4006	-3579	intron_retention	FALSE	canonical	3	1145	junction_4	38.4861988250334	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTTGCATTCTTTCC	298	False	NA	7	True	AATAAA	-16	NA	34104786	34119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ES.21340.91	chr3	+	4125	8	ISM	ENSMUSG00000027680.16	ENSMUST00000001620.13	2459	17	32655	-1092	5966	112	3prime_fragment	FALSE	canonical	3	36	junction_5	507.435770540952	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGAAGACTTAATTTTAT	2258	False	NA	10	True	ATTAAA	-18	NA	34106746	34124583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ES.21340.92	chr3	+	8871	2	NIC	ENSMUSG00000027680.16	novel	2158	15	NA	NA	6653	-3586	intron_retention	FALSE	canonical	3	1145	junction_1	0	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAACCAATTTTTGCAT	2945	False	NA	0	True	AATAAA	-9	NA	34107433	34119900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34112381_34115976
ES.21340.93	chr3	+	3011	6	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	33264	3588	6740	-3580	internal_fragment	FALSE	canonical	3	1145	junction_4	38.2601620487943	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATTTTTGCATTCTTTC	3032	False	NA	6	True	AATAAA	-15	NA	34107520	34119906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267
ES.21340.94	chr3	+	3994	5	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	34116	3840	7592	-3832	intron_retention	FALSE	canonical	3	1145	junction_4	38.4861988250334	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGATGCATGTTAAT	3884	False	NA	NA	False	AATAAA	-23	NA	34108372	34119654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976
ES.21340.95	chr3	+	3304	5	NIC	ENSMUSG00000027680.16	novel	2158	15	NA	NA	7603	-1	intron_retention	FALSE	canonical	3	506	junction_4	303.623430419986	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGGAAATGTTATTTTGT	3895	False	NA	11	True	ATTAAA	-14	NA	34108383	34123485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34108481_34110478_34110566_34112172_34112381_34115976_34118469_34123065
ES.21340.96	chr3	+	1836	6	ISM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	34144	-624	7617	-353	3prime_fragment	FALSE	canonical	3	506	junction_5	284.530771622333	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGCTGATTTTTAACT	3909	False	NA	7	True	AATAAA	-11	NA	34108397	34124118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ES.21340.98	chr3	+	1993	4	NNC	ENSMUSG00000027680.16	novel	1986	15	NA	NA	9743	-3581	intron_retention	FALSE	canonical	3	23	junction_2	576.548542815106	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTTTTGCATTCTTT	6035	False	NA	5	True	AATAAA	-14	NA	34110523	34119905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34110566_34112172_34112318_34116012_34116181_34118267
ES.21340.99	chr3	+	1293	5	NIC	ENSMUSG00000027680.16	novel	1986	15	NA	NA	11401	-3588	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	501.259600905559	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCAACCAATTTTTGC	7693	False	NA	-2	True	AATAAA	-7	NA	34112181	34119898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122
ES.21341.1	chr3	-	216	1	Intergenic	novelGene_17692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTTAATTGCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	34082117	34081901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34081900_34082100
ES.21342.1	chr3	-	5061	6	NNC	ENSMUSG00000027679.14	novel	2499	6	NA	NA	11177	3783	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCTTATCTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	34123152	34106385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_34108479_34110476_34110564_34112170_34112385_34115980_34118467_34122307_34122400_34123063
ES.21342.2	chr3	-	2974	7	NNC	ENSMUSG00000027679.14	novel	2499	6	NA	NA	11177	3783	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCTTATCTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	34123152	34106385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_34108479_34110476_34110564_34112170_34112385_34115980_34116180_34118266_34118467_34122307_34122400_34123063
ES.21342.3	chr3	-	4885	6	NNC	ENSMUSG00000027679.14	novel	2499	6	NA	NA	11176	3783	intron_retention	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCTTATCTTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	34123153	34106385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_34108479_34110476_34110564_34112170_34112230_34112314_34112385_34115980_34118467_34123063
ES.21343.1	chr3	-	598	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	-12	73	-12	2	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTGTCTTGGTATATT	NA	False	NA	-2	True	NA	NA	NA	34135482	34131500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ES.21343.2	chr3	-	2257	3	NIC	ENSMUSG00000027679.14	novel	1695	5	NA	NA	-1	1	intron_retention	FALSE	canonical	3	3089	junction_1	263.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTGTCTTGGTATAT	NA	False	NA	-3	True	AATAAA	-45	NA	34135460	34131501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_34133434_34134232_34134432_34135334
ES.21343.3	chr3	-	661	5	NIC	ENSMUSG00000027679.14	novel	659	6	NA	NA	-3	1	intron_retention	FALSE	canonical	3	3089	junction_3	292.612691966702	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTGTCTTGGTATAT	NA	False	NA	-3	True	AATAAA	-45	NA	34135473	34131501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134432_34135334
ES.21343.7	chr3	-	3034	2	NIC	ENSMUSG00000027679.14	novel	1695	5	NA	NA	14	-6	intron_retention	FALSE	canonical	3	3616	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTAAATCAGTGTCTT	NA	False	NA	-10	True	AATAAA	-38	NA	34135445	34131508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_34134432_34135334
ES.21343.9	chr3	-	600	5	FSM	ENSMUSG00000027679.14	ENSMUST00000117223.4	1695	5	-64	1159	-5	-1159	multi-exon	FALSE	canonical	3	3089	junction_2	271.507366382572	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAATGTAAGAACTAC	NA	False	NA	NA	False	AATAAA	-10	NA	34135475	34132741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ES.21344.1	chr3	+	3381	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-1322	-2	-1322	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTCTTTCATTTC	3285	False	NA	21	True	AATAAA	-26	NA	34703231	34706612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34703200_34706600
ES.21344.2	chr3	+	2421	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-412	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATGCCTGAGTCTTTC	4195	False	NA	16	True	AATAAA	-21	NA	34704141	34706607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34705786_34705830
ES.21344.3	chr3	+	1485	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-412	984	-412	-984	mono-exon	FALSE	NA	NA	NA	NA	NA	2286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAAAAATCTCCG	4195	False	NA	NA	False	AAAAAG	-30	NA	34704141	34705626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34704100_34705600
ES.21344.4	chr3	+	2218	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-410	249	-410	-249	mono-exon	FALSE	NA	NA	NA	NA	NA	2357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGAAATATTTTCTTA	4197	False	NA	33	True	CATAAA	-16	NA	34704143	34706361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34704100_34706400
ES.21344.5	chr3	+	1631	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	-409	835	-409	-835	mono-exon	FALSE	NA	NA	NA	NA	NA	2306	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGAGGGCGGCGGGG	4198	False	NA	NA	False	NA	NA	NA	34704144	34705775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34704100_34705800
ES.21344.6	chr3	+	2349	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-370	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATGCCTGAGTCTT	4237	False	NA	14	True	AATAAA	-19	NA	34704183	34706605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34704588_34704660
ES.21344.7	chr3	+	2330	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-339	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATGCCTGAGTCTT	4268	False	NA	14	True	AATAAA	-19	NA	34704214	34706605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34704452_34704512
ES.21344.8	chr3	+	2211	2	Genic_Genomic	ENSMUSG00000074637.8	novel	2057	1	NA	NA	-220	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAATTATGCCTGAG	4387	False	NA	10	True	AATAAA	-15	NA	34704333	34706601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34705604_34705660
ES.21344.9	chr3	+	1274	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	431	352	431	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	2350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAAATGTCCATGC	5038	False	NA	-70	True	ACTAAA	-22	NA	34704984	34706258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34705000_34706300
ES.21345.1	chr3	-	3023	2	Antisense	novelGene_ENSMUSG00000074637.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTTTGGCTTTTGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	34705536	34695218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_34698043_34705337
ES.21346.1	chr3	+	5768	2	ISM	ENSMUSG00000105265.6	ENSMUST00000197103.2	802	3	14795	-5223	-3067	269	3prime_fragment	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGATGTTTGTGTGGGTGT	7171	False	NA	NA	False	ATTAAA	-14	NA	34707117	34735269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34707434_34729817
ES.21346.2	chr3	+	6249	2	ISM	ENSMUSG00000105265.6	ENSMUST00000197103.2	802	3	15020	-5929	-2842	-793	3prime_fragment	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGAAAGGAAGAAA	7396	False	NA	NA	False	AAAACA	-43	NA	34707342	34735975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34707434_34729817
ES.21346.3	chr3	+	5910	2	FSM	ENSMUSG00000105265.6	ENSMUST00000198758.2	1286	2	299	-4923	299	218	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTAAGTTTCATTGT	NA	False	NA	NA	False	AATATA	-16	NA	34710483	34735218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_34710993_34729817
ES.21346.4	chr3	+	1677	1	ISM	ENSMUSG00000105265.6	ENSMUST00000197977.5	2970	5	115934	2	11072	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTTATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	34730463	34732140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_34730500_34732100
ES.21346.5	chr3	+	2235	2	NNC	ENSMUSG00000105265.6	novel	3486	3	NA	NA	13486	218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTAAGTTTCATTGT	NA	False	NA	NA	False	AATATA	-16	NA	34732877	34735218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_34735030_34735135
ES.21347.1	chr3	-	711	1	Intergenic	novelGene_17694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGCAAAGCGGGCC	NA	False	NA	NA	False	NA	NA	NA	34708415	34707704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34707700_34708400
ES.21348.1	chr3	-	2673	5	NNC	ENSMUSG00000105153.5	novel	580	5	NA	NA	-12	881	intron_retention	FALSE	canonical	0	0	junction_2	5.04975246918104	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGGTATTCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	34770823	34752907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_34753101_34753548_34755649_34764315_34764508_34768115_34768187_34770706
ES.21348.2	chr3	-	1089	5	NNC	ENSMUSG00000105153.5	novel	580	5	NA	NA	15013	878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.67340285895511	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATGATGGTATTCCTA	5627	False	NA	NA	False	NA	NA	NA	34755796	34752910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_34753101_34753548_34754174_34754967_34755092_34755525_34755649_34755769
ES.21348.3	chr3	-	169	1	Intergenic	novelGene_17695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	383	False	NA	NA	False	NA	NA	NA	34761040	34760871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34760900_34761000
ES.21348.4	chr3	-	736	1	NIC	ENSMUSG00000105153.5	novel	580	5	NA	NA	6302	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTTGTTAAGCTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	34764507	34763771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_34763800_34764500
ES.21348.5	chr3	-	666	4	FSM	ENSMUSG00000105153.5	ENSMUST00000198364.2	675	4	-8	17	-8	-17	multi-exon	FALSE	canonical	3	4	junction_1	0.471404520791032	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTATGACAGCGGCG	NA	False	NA	NA	False	NA	NA	NA	34770819	34763788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_34764079_34764315_34764508_34768115_34768187_34770706
ES.21348.6	chr3	-	239	1	Intergenic	novelGene_17696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAGGAGTATTTTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	34766471	34766232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34766200_34766500
ES.21348.7	chr3	-	138	1	Intergenic	novelGene_17697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	34766472	34766334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34766300_34766500
ES.21349.1	chr3	-	178	1	Intergenic	novelGene_17698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACTAGTCTTAGAG	NA	False	NA	NA	False	NA	NA	NA	34775184	34775006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34775000_34775200
ES.2135.1	chr1	-	1069	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	142	1824	142	-1824	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAGACTATGATGC	NA	False	NA	87	True	AAGAAA	-15	NA	184615273	184605946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184606625_184614882
ES.21350.1	chr3	+	4854	1	Intergenic	novelGene_17700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACAAATGACCAGACTTA	NA	False	NA	NA	False	NA	NA	NA	34811390	34816244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_34811400_34816200
ES.21351.1	chr3	-	2069	1	Intergenic	novelGene_17699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTCTATACATCAGGCT	NA	False	NA	NA	False	NA	NA	NA	34811755	34809686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34809700_34811800
ES.21352.1	chr3	-	179	1	Intergenic	novelGene_17701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	34818084	34817905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34817900_34818100
ES.21353.1	chr3	+	2019	1	Intergenic	novelGene_17702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34818293	34820312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_34818300_34820300
ES.21353.2	chr3	+	1112	2	Intergenic	novelGene_17703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGAAAAAGGACAACCAC	NA	False	NA	NA	False	NA	NA	NA	34818300	34820335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_34818433_34819355
ES.21354.1	chr3	+	1877	4	Genic_Genomic	ENSMUSG00000106519.2	novel	1150	2	NA	NA	-4476	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAAGTCTTAGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	34821747	34836494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_34822197_34823567_34823710_34825961_34826090_34835336
ES.21355.1	chr3	-	3041	1	Intergenic	novelGene_17704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGTATAGGGAGGATG	NA	False	NA	NA	False	NA	NA	NA	34821827	34818786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34818800_34821800
ES.21356.1	chr3	-	176	1	Intergenic	novelGene_17705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTACTCAGGAT	NA	False	NA	NA	False	NA	NA	NA	34845730	34845554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34845600_34845700
ES.21357.1	chr3	-	175	1	Intergenic	novelGene_17706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATGGCATACGTC	NA	False	NA	NA	False	NA	NA	NA	34867180	34867005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34867000_34867200
ES.21358.1	chr3	-	206	1	Intergenic	novelGene_17707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACACACACACTGCCC	NA	False	NA	NA	False	NA	NA	NA	34939933	34939727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_34939700_34939900
ES.21359.1	chr3	+	1562	2	Intergenic	novelGene_17708	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACAATCCATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	34948686	34956602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_34949183_34955536
ES.2136.1	chr1	+	188	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	184618691	184618879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184618700_184618900
ES.21360.1	chr3	-	4062	1	FSM	ENSMUSG00000098862.3	ENSMUST00000183357.3	107	1	-3331	-624	-3331	624	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGACAGAAATTCCTT	NA	False	NA	NA	False	NA	NA	NA	34980131	34976069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_34976100_34980100
ES.21361.1	chr3	-	160	1	Intergenic	novelGene_17709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2236	False	NA	NA	False	NA	NA	NA	35129013	35128853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_35128900_35129000
ES.21362.1	chr3	-	1781	5	NNC	ENSMUSG00000105662.5	novel	429	4	NA	NA	577	-800	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.7732867026942	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAGAATATT	NA	False	NA	NA	False	NA	NA	NA	35691137	35652100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35653382_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ES.21362.2	chr3	-	1143	7	NNC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	497	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.0564338768172	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTAGACTCCAATGTG	NA	False	NA	NA	False	AATAAA	-18	NA	35691217	35672768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35673025_35673834_35673956_35677231_35677418_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ES.21362.3	chr3	-	4731	6	ISM	ENSMUSG00000105662.5	ENSMUST00000199182.2	800	7	-2700	-194	-2700	3	intron_retention	FALSE	canonical	0	0	junction_5	14.430523206038	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTAGACTCCAATGTG	NA	False	NA	NA	False	AATAAA	-18	NA	35687813	35672768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_35673025_35673834_35673956_35678500_35678611_35681522_35681682_35682985_35683124_35683866
ES.21362.4	chr3	-	1943	2	ISM	ENSMUSG00000105662.5	ENSMUST00000199182.2	800	7	9587	-189	9587	-2	3prime_fragment	FALSE	canonical	3	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATTGGTTAGACTCCA	NA	False	NA	NA	False	AATAAA	-13	NA	35675526	35672773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_35673025_35673834
ES.21362.5	chr3	-	1078	7	NNC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	576	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0564338768172	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATTGGTTAGACTCCA	NA	False	NA	NA	False	AATAAA	-13	NA	35691138	35672773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35673025_35673834_35673956_35677231_35677437_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ES.21362.6	chr3	-	1011	6	NIC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	437	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	13.8188277360998	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTATTGGTTAGACTCC	NA	False	NA	NA	False	AATAAA	-12	NA	35691277	35672774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35673025_35673834_35673956_35678500_35678611_35681522_35681682_35682985_35683124_35691044
ES.21362.7	chr3	-	2106	2	NIC	ENSMUSG00000105662.5	novel	429	4	NA	NA	534	1909	intron_retention	FALSE	canonical	3	36	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCCAAAAAATCCCAAACA	NA	False	NA	NA	False	NA	NA	NA	35691180	35681153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35683124_35691044
ES.21363.1	chr3	-	2062	1	Intergenic	novelGene_17710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	35777787	35775725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_35775700_35777800
ES.21364.1	chr3	+	4612	3	Genic_Genomic	ENSMUSG00000119567.1	novel	105	1	NA	NA	-2647	3814	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCTGGCTTCTTCGT	3833	False	NA	NA	False	NA	NA	NA	35786874	35793440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_35786900_35787436_35787545_35788961
ES.21365.1	chr3	-	3803	1	Antisense	novelGene_ENSMUSG00000119567.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGCCAATGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	35790118	35786315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_35786300_35790100
ES.21366.1	chr3	+	4630	30	NNC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	-150	0	intron_retention	FALSE	canonical	0	0	junction_1	92.9974108803033	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808104	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808144_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.100	chr3	+	4758	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_23	117.462681603819	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808278	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888514_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.101	chr3	+	4778	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_8	94.6404312357557	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808278	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849939_35854644_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.102	chr3	+	4752	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	1	junction_15	119.454515936196	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808278	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.103	chr3	+	4749	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	canonical	2	9	junction_13	116.998490797913	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808278	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.105	chr3	+	4845	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_15	93.7826185823202	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808280	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864844_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.107	chr3	+	4760	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_8	118.962929399997	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808280	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.108	chr3	+	4750	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-1	-127	intron_retention	FALSE	canonical	0	0	junction_9	93.1470396036306	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTAAATATTGCAAATA	NA	False	NA	NA	False	AATAAA	-22	NA	35808281	35910293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854619_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.109	chr3	+	5135	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_24	117.08564766396	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808283	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35888851_35889122_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.11	chr3	+	4904	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-32	0	intron_retention	FALSE	non_canonical	0	0	junction_20	93.6637165367762	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808222	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881240_35882763_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.110	chr3	+	4766	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_18	90.3157363007322	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808283	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868388_35874171_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.111	chr3	+	4843	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_18	151.150936337012	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808283	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868304_35874077_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888462_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35895178_35895265_35903582_35903714_35909253
ES.21366.112	chr3	+	4879	32	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	134.073488476189	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808284	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253_35909725_35909799
ES.21366.113	chr3	+	6115	29	NNC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	3	-124	intron_retention	FALSE	canonical	2	9	junction_13	93.6695232817843	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATATTGCAAATATAT	NA	False	NA	NA	False	AATAAA	-25	NA	35808285	35910296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.114	chr3	+	2645	20	ISM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	4	2594	4	-2095	5prime_fragment	FALSE	canonical	2	274	junction_18	60.8535775015474	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAGTATAGATCATA	NA	False	NA	NA	False	NA	NA	NA	35808286	35881243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093
ES.21366.115	chr3	+	4754	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_22	92.2082425816695	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808292	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885542_35885645_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.116	chr3	+	4794	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	23	-124	intron_retention	FALSE	canonical	0	0	junction_12	93.1905339841812	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATATTGCAAATATAT	NA	False	NA	NA	False	AATAAA	-25	NA	35808305	35910296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861193_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.117	chr3	+	4639	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	43	-2	intron_retention	FALSE	canonical	0	0	junction_20	137.700160225181	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAACCCTGTTGTTGCA	NA	False	NA	4	True	AATAAA	-10	NA	35808325	35910418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863606_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881252_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.118	chr3	+	4620	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	45	-125	intron_retention	FALSE	non_canonical	0	0	junction_22	93.7308743868181	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATATTGCAAATATA	NA	False	NA	NA	False	AATAAA	-24	NA	35808327	35910295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885585_35887066_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.12	chr3	+	6844	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_18	164.64704336516	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808222	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867496_35868192_35868375_35874057_35874262_35881093_35881252_35882757_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35888851_35889122_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.120	chr3	+	4882	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	53	0	intron_retention	FALSE	canonical	0	0	junction_6	93.7729948018205	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808335	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842773_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.121	chr3	+	3423	19	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	56	0	intron_retention	FALSE	canonical	0	0	junction_7	111.504927090385	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808338	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.122	chr3	+	4367	28	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	64	-78	intron_retention	FALSE	canonical	0	0	junction_21	121.731641706635	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATGTCTTTCTTTGGCC	NA	False	NA	-72	True	ATTAAA	-9	NA	35808346	35910342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882819_35888514_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.123	chr3	+	4738	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_23	93.3040750244662	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808373	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887105_35888457_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.124	chr3	+	6255	30	NNC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	246	0	intron_retention	FALSE	canonical	2	8	junction_21	117.572766953627	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808528	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35883565_35883745_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.125	chr3	+	175	1	FSM	ENSMUSG00000037400.18	ENSMUST00000200351.2	1906	1	1731	0	1703	0	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	35809985	35810160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35810000_35810200
ES.21366.126	chr3	+	4471	28	ISM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	28376	5	-5605	0	3prime_fragment	FALSE	canonical	2	274	junction_16	48.8780571614634	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35836658	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.127	chr3	+	4384	27	ISM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	30371	2	-3610	0	3prime_fragment	FALSE	canonical	2	274	junction_15	43.5984229669733	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35838653	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.129	chr3	+	5992	26	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	12	0	intron_retention	FALSE	canonical	1	1	junction_20	117.942521594207	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35842275	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35888851_35889122_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.13	chr3	+	6258	29	FSM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	-60	124	-32	-124	multi-exon	FALSE	canonical	2	274	junction_18	53.267171706715	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATATTGCAAATATAT	NA	False	NA	NA	False	AATAAA	-25	NA	35808222	35910296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.130	chr3	+	3351	22	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	50	-126	intron_retention	FALSE	non_canonical	0	0	junction_13	94.420826712155	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAATATTGCAAATAT	NA	False	NA	NA	False	AATAAA	-23	NA	35842313	35910294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866470_35885618_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.131	chr3	+	4991	19	NNC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	-2015	0	intron_retention	FALSE	canonical	2	4	junction_3	104.756979201187	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	4136	False	NA	9	True	AATAAA	-15	NA	35859975	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35860034_35860916_35861115_35863505_35863606_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.132	chr3	+	5015	18	NNC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	-1066	-125	intron_retention	FALSE	canonical	0	0	junction_1	108.222505638354	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATATTGCAAATATA	5085	False	NA	NA	False	AATAAA	-24	NA	35860924	35910295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35861193_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.133	chr3	+	4903	19	NNC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	-928	0	intron_retention	FALSE	canonical	1	1	junction_1	161.426702397446	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	5223	False	NA	9	True	AATAAA	-15	NA	35861062	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35861115_35862757_35862874_35863505_35863606_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.134	chr3	+	3416	18	ISM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	55222	3	1514	-1	3prime_fragment	FALSE	canonical	2	274	junction_6	46.541271634947	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	7665	False	NA	8	True	AATAAA	-14	NA	35863504	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.135	chr3	+	3023	16	NNC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	4219	0	intron_retention	FALSE	canonical	0	0	junction_3	148.655963740294	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	2406	False	NA	6	True	AATAAA	-12	NA	35866209	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.136	chr3	+	4389	14	ISM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	57927	0	4219	0	3prime_fragment	FALSE	canonical	2	274	junction_3	49.7509775111365	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	2406	False	NA	6	True	AATAAA	-12	NA	35866209	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.137	chr3	+	8421	12	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4263	0	intron_retention	FALSE	canonical	2	274	junction_3	52.3802057118261	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	2450	False	NA	11	True	AATAAA	-17	NA	35866253	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.138	chr3	+	2856	14	ISM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	58077	5	4369	0	3prime_fragment	FALSE	canonical	2	274	junction_2	51.3278129155941	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	2556	False	NA	6	True	AATAAA	-12	NA	35866359	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.139	chr3	+	4052	10	ISM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	72582	0	-334	0	3prime_fragment	FALSE	canonical	3	391	junction_3	29.1170477407275	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35880864	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.14	chr3	+	5017	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-31	-1	intron_retention	FALSE	canonical	0	0	junction_18	116.522272549071	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808223	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.140	chr3	+	5320	9	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-193	0	intron_retention	FALSE	canonical	3	398	junction_2	26.2366037245677	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35881005	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35881248_35882749_35882853_35885514_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.141	chr3	+	3776	8	NIC	ENSMUSG00000037400.18	novel	4102	25	NA	NA	4056	0	intron_retention	FALSE	canonical	3	363	junction_5	36.8449592265776	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35885254	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.15	chr3	+	4884	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-31	0	intron_retention	FALSE	canonical	2	14	junction_27	91.2975691656296	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808223	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.17	chr3	+	6380	29	FSM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	-53	-5	-25	0	multi-exon	FALSE	canonical	2	274	junction_18	53.267171706715	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808229	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.18	chr3	+	4636	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-21	0	intron_retention	FALSE	non_canonical	0	0	junction_18	90.3157363007322	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808233	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868232_35874190_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.19	chr3	+	2707	15	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-18	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	158.68290804659	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACCCTGTTGTTGCAT	NA	False	NA	5	True	AATAAA	-11	NA	35808236	35910419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808337_35832173_35832291_35836660_35836736_35874209_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.20	chr3	+	3072	22	FSM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	-44	0	-16	0	multi-exon	FALSE	canonical	2	8	junction_21	105.101268517516	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCTTTGTGGTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	35808238	35883837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35883565
ES.21366.21	chr3	+	4925	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_28	117.164011349712	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808241	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35892227_35892292_35893240_35893364_35903582_35903714_35909253
ES.21366.23	chr3	+	4553	28	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_10	96.5178931789526	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808243	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.24	chr3	+	4856	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_5	93.7842921824677	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808244	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842281_35842556_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.25	chr3	+	4992	31	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_29	117.246942627753	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808244	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35895178_35895265_35903582_35903714_35909253
ES.21366.28	chr3	+	6296	28	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	5	junction_8	95.1676882607164	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808245	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.29	chr3	+	4880	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-9	1	intron_retention	FALSE	canonical	0	0	junction_17	93.6437578743123	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCTGTTGTTGCATGT	NA	False	NA	7	True	AATAAA	-13	NA	35808245	35910421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866470_35868217_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.3	chr3	+	8794	28	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-50	0	intron_retention	FALSE	canonical	2	274	junction_17	52.3790657562013	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808204	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.30	chr3	+	4950	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_18	116.522272549071	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808245	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867385_35868224_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.31	chr3	+	4834	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_23	93.3040750244662	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808245	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888514_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.32	chr3	+	4916	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_9	93.1470396036306	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808246	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852812_35854619_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.33	chr3	+	3749	22	ISM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	-36	23949	-8	2634	5prime_fragment	FALSE	canonical	2	274	junction_18	58.1437736365504	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTCTTGTTGTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	35808246	35886471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514
ES.21366.35	chr3	+	3353	12	ISM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	-36	20856	-8	-1449	5prime_fragment	FALSE	canonical	3	350	junction_9	58.7120723362455	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTGTACACACCAAGTT	NA	False	NA	NA	False	NA	NA	NA	35808246	35862981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916
ES.21366.36	chr3	+	4451	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	150.047832509558	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808246	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808287_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860029_35860995_35861115_35862757_35862874_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.37	chr3	+	5019	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	116.589788956361	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808246	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35841493_35841614_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.38	chr3	+	4845	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_13	93.7818198080846	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808246	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864323_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.39	chr3	+	4836	29	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	5	junction_8	93.8705347588814	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808246	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.4	chr3	+	6199	28	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-49	0	intron_retention	FALSE	canonical	1	4	junction_11	95.4360722984114	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808205	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860029_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.41	chr3	+	4857	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	116.164117778319	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808247	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832263_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852802_35854641_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.42	chr3	+	4873	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	90.1876759023156	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808247	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832266_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.43	chr3	+	4754	28	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	123.383751234055	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808247	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842705_35843706_35843811_35849907_35849956_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.45	chr3	+	6163	28	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-3	-125	intron_retention	FALSE	canonical	2	5	junction_8	95.1676882607164	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATATTGCAAATATA	NA	False	NA	NA	False	AATAAA	-24	NA	35808251	35910295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.47	chr3	+	3843	20	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-3	0	intron_retention	FALSE	canonical	1	5	junction_2	103.125102199227	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808251	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.49	chr3	+	4860	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_17	93.6437578743123	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808253	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868224_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.5	chr3	+	4944	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-75	-1	-47	1	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTTGCATGTTATCT	NA	False	NA	12	True	AATAAA	-18	NA	35808207	35910426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.50	chr3	+	4777	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_27	93.4020880893625	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808253	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893315_35893364_35903582_35903714_35909253
ES.21366.51	chr3	+	6371	29	NNC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_25	95.0407740103678	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808254	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891089_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.52	chr3	+	4767	29	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	95.4326546923675	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.53	chr3	+	4715	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_19	116.363396306571	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTTGCATGTTATCT	NA	False	NA	12	True	AATAAA	-18	NA	35808254	35910426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874189_35874225_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903622_35909306
ES.21366.54	chr3	+	4857	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_18	152.156617166141	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808254	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881252_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35909253
ES.21366.55	chr3	+	5146	32	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_18	149.633433470167	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808255	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867496_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35892229_35892292_35893197_35893364_35903582_35903714_35909253
ES.21366.56	chr3	+	6445	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_18	118.373248335602	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808255	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.58	chr3	+	6539	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_18	118.373248335602	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACCCTGTTGTTGCAT	NA	False	NA	5	True	AATAAA	-11	NA	35808255	35910419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867496_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.6	chr3	+	4893	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_2	90.1876759023156	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808215	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836702_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.60	chr3	+	4808	30	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_11	93.7370775873957	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808255	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860029_35860995_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.61	chr3	+	5402	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_27	93.4020880893625	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808255	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35892292_35893240_35893364_35903582_35903714_35909253
ES.21366.62	chr3	+	4844	29	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_7	95.2311567412982	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808255	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.64	chr3	+	4813	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_13	92.4366158128103	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35808255	35910423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.66	chr3	+	4622	28	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_23	96.2781464377118	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808256	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.67	chr3	+	4837	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_28	93.5992545474751	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903637_35903714_35909253
ES.21366.68	chr3	+	6271	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	2	9	junction_13	93.6695232817843	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.7	chr3	+	4812	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	-67	123	-39	-118	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCAAATATATTTAATT	NA	False	NA	NA	False	AATAAA	-31	NA	35808215	35910302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.70	chr3	+	4942	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_18	134.959619475193	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.71	chr3	+	6394	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_12	94.413353809464	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861158_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.73	chr3	+	3763	21	ISM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	-24	2	4	-2	intron_retention	FALSE	canonical	2	274	junction_18	59.391160958513	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTTCTTTGTGGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	35808258	35883835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749
ES.21366.74	chr3	+	4856	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	-124	intron_retention	FALSE	canonical	0	0	junction_18	116.522272549071	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATATTGCAAATATAT	NA	False	NA	NA	False	AATAAA	-25	NA	35808258	35910296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.75	chr3	+	4720	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	2	5	junction_8	119.731262647239	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874155_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.76	chr3	+	4685	28	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	88.6032137817552	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.77	chr3	+	4263	24	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	94.6114329846968	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808258	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.78	chr3	+	6360	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_9	94.3676254045305	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808262	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854619_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.8	chr3	+	6285	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-37	0	intron_retention	FALSE	canonical	2	7	junction_19	93.8912948845741	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808217	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874155_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.80	chr3	+	4781	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	8	0	intron_retention	FALSE	canonical	2	7	junction_19	92.6363506414543	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808262	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874155_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.81	chr3	+	4742	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	9	0	intron_retention	FALSE	canonical	2	4	junction_13	93.1827759111954	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808263	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863606_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.82	chr3	+	5010	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_2	114.448921163791	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808263	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35833996_35834125_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.83	chr3	+	4709	28	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_2	88.666171600462	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808265	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.84	chr3	+	4779	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_24	93.4452728872375	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808274	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888556_35889463_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.85	chr3	+	4825	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_22	92.2082425816695	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808275	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885537_35885586_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.86	chr3	+	6318	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-6	-126	intron_retention	FALSE	canonical	1	1	junction_12	118.878168832508	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAATATTGCAAATAT	NA	False	NA	NA	False	AATAAA	-23	NA	35808276	35910294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35862757_35862874_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.87	chr3	+	4851	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_25	93.7647776700297	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808276	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889513_35891111_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.88	chr3	+	4945	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_12	93.1905339841812	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808278	35910420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861193_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.89	chr3	+	4677	29	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	-125	intron_retention	FALSE	canonical	2	5	junction_8	93.8705347588814	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATATTGCAAATATA	NA	False	NA	NA	False	AATAAA	-24	NA	35808278	35910295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.9	chr3	+	4969	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-37	-2	intron_retention	FALSE	canonical	0	0	junction_12	93.1905339841812	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAACCCTGTTGTTGCA	NA	False	NA	4	True	AATAAA	-10	NA	35808217	35910418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861158_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.91	chr3	+	4803	31	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_19	92.2082425816695	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808278	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874153_35874221_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.92	chr3	+	6228	28	NIC	ENSMUSG00000037400.18	novel	6322	29	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_16	96.2556751929917	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTTGCATGTTATCT	NA	False	NA	12	True	AATAAA	-18	NA	35808278	35910426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ES.21366.94	chr3	+	2789	19	ISM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	-4	9290	-4	-8791	5prime_fragment	FALSE	canonical	2	274	junction_18	62.4535382860286	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTCCTCAGGTCTGG	NA	False	NA	NA	False	NA	NA	NA	35808278	35874547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057
ES.21366.95	chr3	+	4851	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_26	119.435921555901	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808278	35910425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891199_35891570_35891610_35893178_35893364_35903582_35903714_35909253
ES.21366.96	chr3	+	4823	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	5	junction_5	93.0361186942387	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTGTTGTTGCATGTT	NA	False	NA	8	True	AATAAA	-14	NA	35808278	35910422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842620_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ES.21366.97	chr3	+	4698	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	-126	intron_retention	FALSE	canonical	2	14	junction_27	91.2975691656296	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAATATTGCAAATAT	NA	False	NA	NA	False	AATAAA	-23	NA	35808278	35910294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
ES.21366.99	chr3	+	6346	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	-4	-91	intron_retention	FALSE	canonical	0	0	junction_18	138.406860297486	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATATAAGCCATAATG	NA	False	NA	-85	True	TATAAA	-1	NA	35808278	35910329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35867304_35867398_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891089_35891174_35891634_35893364_35903582_35903714_35909253
ES.21367.1	chr3	-	7141	1	Intergenic	novelGene_17711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTCCTGGAATGCAC	NA	False	NA	NA	False	NA	NA	NA	35819754	35812613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_35812600_35819800
ES.21368.1	chr3	-	469	1	Intergenic	novelGene_17712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAACAAAAACCCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	35824804	35824335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_35824300_35824800
ES.21369.1	chr3	-	6676	1	Antisense	novelGene_ENSMUSG00000037400.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATACCTAGGATACAAC	NA	False	NA	NA	False	NA	NA	NA	35883379	35876703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_35876700_35883400
ES.2137.1	chr1	+	6531	2	Antisense	novelGene_ENSMUSG00000026620.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTTTCAAACATTTTT	NA	False	NA	NA	False	NA	NA	NA	184721922	184728568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_184722676_184722790
ES.21370.1	chr3	-	8136	1	Intergenic	novelGene_17713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGGTTTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	35941645	35933509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_35933500_35941600
ES.21371.1	chr3	+	627	2	Antisense	novelGene_ENSMUSG00000027708.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35979021	35979765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_35979548_35979664
ES.21372.1	chr3	+	750	3	FSM	ENSMUSG00000085655.6	ENSMUST00000122858.6	490	3	-142	-118	-142	118	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAATAAATCTGCT	NA	False	NA	NA	False	NA	NA	NA	35987051	35996984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_35987317_35991752_35991848_35996594
ES.21372.2	chr3	+	5140	1	Genic_Genomic	ENSMUSG00000085655.6	novel	NA	NA	NA	NA	-137	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTTTGTTTGATTCA	NA	False	NA	NA	False	AATAAA	-12	NA	35987056	35992196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_35987100_35992200
ES.21373.1	chr3	-	5896	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-1	2185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.2370160442194	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTATCTAATGGAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	35986986	35944068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35948458_35949091_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.10	chr3	-	4114	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	627	239	-9	-239	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGGGCTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	35986994	35946492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.11	chr3	-	3958	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	472	550	-164	-550	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCTGAGTGCAGAGTT	NA	False	NA	NA	False	NA	NA	NA	35987149	35946803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.15	chr3	-	3393	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-3	528	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	67.2370160442194	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCCCATATTATTTCA	NA	False	NA	NA	False	AATAAA	-28	NA	35986988	35947126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975195_35975275_35975337_35986933
ES.21373.16	chr3	-	3390	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-54	524	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTCTCCCATATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	35987039	35947130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
ES.21373.17	chr3	-	3446	7	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	0	522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.5631372583361	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATCTTCTCCCATATT	NA	False	NA	NA	False	AATAAA	-22	NA	35986985	35947132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951707_35951958_35952025_35970368_35970500_35973149_35973320_35975119_35975337_35986933
ES.21373.18	chr3	-	3225	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-34	521	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	80.3308160048185	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAATCTTCTCCCATAT	NA	False	NA	NA	False	AATAAA	-21	NA	35987019	35947133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975261_35975337_35986933
ES.21373.2	chr3	-	6521	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	635	-2176	-1	2176	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAAAAACTTTTTATCT	NA	False	NA	NA	False	AATAAA	-21	NA	35986986	35944077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.20	chr3	-	3656	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-4	520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.4038925804921	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAAATCTTCTCCCATA	NA	False	NA	NA	False	AATAAA	-20	NA	35986968	35947134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35984094_35984305_35986933
ES.21373.21	chr3	-	3308	7	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-1	518	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	69.5741011839575	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACTAAATCTTCTCCCA	NA	False	NA	NA	False	AATAAA	-18	NA	35986974	35947136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975261_35975337_35986933
ES.21373.22	chr3	-	2937	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-2	73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	67.2370160442194	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAATGTGTTTATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	35986987	35947581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975195_35975275_35975337_35986933
ES.21373.23	chr3	-	2910	7	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-36	73	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	69.5741011839575	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAATGTGTTTATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	35987021	35947581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975261_35975337_35986933
ES.21373.24	chr3	-	2921	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-40	69	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGATTTAATGTGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	35987025	35947585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
ES.21373.25	chr3	-	3133	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	-35	1336	-35	65	multi-exon	FALSE	canonical	1	4	junction_6	71.2618411213182	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAATTGATTTAATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	35986518	35947589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
ES.21373.26	chr3	-	3044	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	599	1337	-37	64	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAATTGATTTAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	35987022	35947590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.27	chr3	-	3113	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	375	1492	-261	-91	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATAGTGTTTGTCATC	NA	False	NA	64	True	TTTAAA	-15	NA	35987246	35947745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.29	chr3	-	2093	7	NNC	ENSMUSG00000027708.15	novel	4434	7	NA	NA	0	-165	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.3394774656273	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTTGATATTTGTGT	NA	False	NA	-10	True	CATAAA	-12	NA	35975337	35947819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35948458_35949091_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ES.21373.3	chr3	-	5325	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-197	915	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTTCTCTCCCTTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	35987182	35945338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
ES.21373.30	chr3	-	2769	7	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-1	-165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.4072770657885	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTTGATATTTGTGT	NA	False	NA	-10	True	CATAAA	-12	NA	35986986	35947819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970486_35973145_35973319_35975119_35975337_35986933
ES.21373.31	chr3	-	2592	5	FSM	ENSMUSG00000027708.15	ENSMUST00000197546.5	621	5	0	-1971	0	-169	multi-exon	FALSE	canonical	3	38	junction_3	66.1702350003383	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAAAATCTTGATATTT	NA	False	NA	-14	True	CATAAA	-8	NA	35975337	35947823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119
ES.21373.32	chr3	-	2669	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	521	1790	-115	-389	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGATTTCATTTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	35987100	35948043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.33	chr3	-	1348	2	ISM	ENSMUSG00000027708.15	ENSMUST00000197546.5	621	5	23680	-1249	12337	-891	3prime_fragment	FALSE	canonical	3	197	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTTTGTCTCACTTGC	NA	False	NA	NA	False	TATAAA	-15	NA	35951657	35948545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_35949849_35951612
ES.21373.34	chr3	-	1764	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	599	2617	-37	588	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCATGAGGGTATTAGG	NA	False	NA	NA	False	AATATA	-12	NA	35987022	35948870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.35	chr3	-	1490	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	375	3115	-261	90	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACTTCTTAAGTATA	NA	False	NA	NA	False	ATTAAA	-27	NA	35987246	35949368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.36	chr3	-	2859	5	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8996	1724	110	80	intron_retention	FALSE	canonical	3	154	junction_3	23.1988685068906	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAATTTATAAAAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	35975227	35949378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149
ES.21373.37	chr3	-	1063	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	4	80	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAATTTATAAAAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	35986960	35949378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
ES.21373.38	chr3	-	2663	7	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-51	80	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.1911635068623	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAATTTATAAAAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	35987036	35949378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35950603_35950831_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975261_35975337_35986933
ES.21373.4	chr3	-	4074	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	80.3308160048185	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTATTGCTTCCATTT	NA	False	NA	2	True	TATAAA	-19	NA	35986986	35946251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975261_35975337_35986933
ES.21373.40	chr3	-	990	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	-7	3451	-7	90	multi-exon	FALSE	canonical	1	4	junction_6	71.2618411213182	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCTGGCTGGACTG	NA	False	NA	NA	False	AATAAA	-22	NA	35986490	35949704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
ES.21373.41	chr3	-	855	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	668	3457	11	84	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCAATTTCTGCTGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	35986953	35949710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.42	chr3	-	5435	2	NNC	ENSMUSG00000027708.15	novel	684	5	NA	NA	-2042	3162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACCAAAAATTCATGTG	NA	False	NA	NA	False	NA	NA	NA	35966036	35960130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35960445_35960915
ES.21373.43	chr3	-	4235	2	NNC	ENSMUSG00000027708.15	novel	684	5	NA	NA	-874	3131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35964868	35960161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35960445_35960916
ES.21373.44	chr3	-	5251	4	FSM	ENSMUSG00000027708.15	ENSMUST00000196115.2	631	4	-15	-4605	-3	-2397	multi-exon	FALSE	canonical	3	174	junction_3	17.5689119374726	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTTTCTTGCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	35986988	35965689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.45	chr3	-	3496	1	FSM	ENSMUSG00000027708.15	ENSMUST00000196174.2	2949	1	-547	0	329	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35986154	35982658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35982700_35986200
ES.21373.5	chr3	-	4660	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	322	-2	-314	2	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTATTGCTTCCATTT	NA	False	NA	2	True	TATAAA	-19	NA	35987299	35946251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.6	chr3	-	4582	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.4038925804921	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	False	NA	0	True	TATAAA	-17	NA	35986988	35946253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35984069_35984305_35986933
ES.21373.7	chr3	-	3686	8	NNC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.2370160442194	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTTTTATTGCTTCCA	NA	False	NA	-1	True	TATAAA	-16	NA	35986962	35946254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_35948458_35949091_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ES.21373.8	chr3	-	4251	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	-40	-2	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTTTATTGCTTCC	NA	False	NA	-2	True	TATAAA	-15	NA	35987025	35946255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
ES.21373.9	chr3	-	3873	5	FSM	ENSMUSG00000027708.15	ENSMUST00000197546.5	621	5	112	-3364	112	-177	multi-exon	FALSE	canonical	3	38	junction_3	66.1702350003383	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATGTTTTGATAAGA	NA	False	NA	NA	False	NA	NA	NA	35975225	35946430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119
ES.21374.1	chr3	-	6916	20	Fusion	ENSMUSG00000105095.2_ENSMUSG00000027709.10	novel	2455	19	NA	NA	-1	2	multi-exon	FALSE	canonical	1	2	junction_8	78.4376174663344	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCCTTGGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	36054791	36009582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030627_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.10	chr3	-	2914	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-13	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.7736059742487	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054771	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029965_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.11	chr3	-	2837	17	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-11	16	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	84.8328319402341	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054769	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.12	chr3	-	4395	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	37	16	intron_retention	FALSE	canonical	3	210	junction_7	27.4612025785256	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054721	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.13	chr3	-	4728	1	Genic_Genomic	ENSMUSG00000027709.10	novel	NA	NA	NA	NA	-2914	16	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36018172	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_36013400_36018200
ES.21374.14	chr3	-	2836	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	40	16	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	63.0341808741694	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054718	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.15	chr3	-	4411	17	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-16	16	intron_retention	FALSE	canonical	0	0	junction_6	85.4800552395119	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054806	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029965_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.18	chr3	-	4311	16	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_6	88.2703926706018	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	36054812	36013462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.19	chr3	-	2455	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	1	-1	1	1	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTGTAGTTTTTTTT	NA	False	NA	NA	False	TATAAA	-29	NA	36054826	36013980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.20	chr3	-	3963	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-2	3	intron_retention	FALSE	canonical	3	210	junction_7	27.4612025785256	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTGAGCTGTAGTTTT	NA	False	NA	NA	False	TATAAA	-25	NA	36054829	36013984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.21	chr3	-	4140	18	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_7	97.114850139652	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054826	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030495_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.22	chr3	-	2296	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	63.0341808741694	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054721	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.23	chr3	-	8113	17	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_6	99.459476672663	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054795	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36028440_36029943_36030054_36030495_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.24	chr3	-	3872	17	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_4	64.6063802963763	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054791	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.25	chr3	-	4152	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_7	80.5174047590693	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054791	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030495_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.26	chr3	-	2478	20	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	90.9865595383214	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054783	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026689_36028222_36028440_36029943_36030054_36030627_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.27	chr3	-	4106	18	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	107.851685935685	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054825	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026686_36028222_36030054_36030495_36030726_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.28	chr3	-	3024	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	61.7290225276751	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054729	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36027387_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.3	chr3	-	3628	20	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	17	2159	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	57.9639299436748	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCACTGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	36054741	36011301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36011429_36012849_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.30	chr3	-	4887	5	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	2462	0	intron_retention	FALSE	canonical	3	249	junction_4	24.5089269450949	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36028274	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36017842_36018475_36018614_36022572_36022623_36026626
ES.21374.31	chr3	-	2132	17	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	65.2839650584276	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054804	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.32	chr3	-	2422	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	59.6717616281141	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTGAGCTGTAGT	NA	False	NA	NA	False	TATAAA	-22	NA	36054825	36013987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026689_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.36	chr3	-	3908	17	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_16	64.8938736996798	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAGACTGAGCTGTA	NA	False	NA	NA	False	TATAAA	-20	NA	36054826	36013989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21374.37	chr3	-	2404	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.6518500718669	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAGACTGAGCTGTA	NA	False	NA	NA	False	TATAAA	-20	NA	36054790	36013989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022617_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.38	chr3	-	3018	19	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	114	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	61.6109107300619	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAGACTGAGCTGTA	NA	False	NA	NA	False	TATAAA	-20	NA	36054644	36013989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36053875
ES.21374.39	chr3	-	2337	18	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	80.8607671730863	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAGACTGAGCTGTA	NA	False	NA	NA	False	TATAAA	-20	NA	36054792	36013989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36026626_36026689_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.4	chr3	-	5034	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	99	-2678	30	2157	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCACTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	36054728	36011303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.40	chr3	-	2284	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	42	129	5	-123	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTCTGCGAACAGCAAG	NA	False	NA	NA	False	AATAGA	-18	NA	36054785	36014110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.41	chr3	-	1845	11	ISM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	15	16344	15	-381	5prime_fragment	FALSE	canonical	3	213	junction_9	16.2185079461706	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGAAGAAAGCCAGCCTT	NA	False	NA	NA	False	NA	NA	NA	36054812	36030325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.42	chr3	-	3437	11	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	40	-602	intron_retention	FALSE	non_canonical	0	0	junction_1	71.2772053324203	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCTATAAATCTCAC	NA	False	NA	NA	False	NA	NA	NA	36054718	36030546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36032671_36032841_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.5	chr3	-	2488	20	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-1	2157	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	59.7672771993397	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCACTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	36054791	36011303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36011429_36014037_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.6	chr3	-	6553	18	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	20	2157	intron_retention	FALSE	canonical	3	210	junction_7	27.4612025785256	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCACTGTCATGA	NA	False	NA	NA	False	NA	NA	NA	36054738	36011303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.7	chr3	-	4137	20	NNC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-2	1203	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.1697966768458	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAATAAGGGCTGAAG	NA	False	NA	NA	False	AATAAA	-12	NA	36054829	36012257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36012594_36012637_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.8	chr3	-	2988	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	4	-537	4	16	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054823	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ES.21374.9	chr3	-	8433	16	NIC	ENSMUSG00000027709.10	novel	2455	19	NA	NA	-12	16	intron_retention	FALSE	canonical	1	2	junction_15	66.843964241774	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCGTGGCCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36054802	36013444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36054629
ES.21375.1	chr3	+	216	1	Intergenic	novelGene_17714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCCCATCTTAACTGT	NA	False	NA	NA	False	NA	NA	NA	36110699	36110915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_36110700_36110900
ES.21376.1	chr3	+	3962	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	2	-34	2	34	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTGTGACATAGTTT	NA	False	NA	39	True	NA	NA	NA	36120129	36147036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.11	chr3	+	2499	19	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	2	85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.3948966391616	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTAGTGCTCCTCCAC	NA	False	NA	8	True	AATAAA	-27	NA	36120222	36145606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36129667_36129728_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.14	chr3	+	6468	14	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	11	83	intron_retention	TRUE	canonical	0	0	junction_12	53.778528963842	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTGTAGTGCTCCTCC	NA	False	NA	6	True	AATAAA	-25	NA	36120231	36145604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139763_36139847_36144304_36144979
ES.21376.15	chr3	+	3705	17	NIC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	14	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	48.3113276054385	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATATTAAAGAAAT	NA	False	NA	-11	True	NA	NA	NA	36120234	36146986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36120420_36123858_36123953_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.16	chr3	+	3877	19	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.3948966391616	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTTACCAAGGAATT	NA	False	NA	8	True	NA	NA	NA	36120243	36147005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36129667_36129728_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.17	chr3	+	2870	19	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	26	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	45.9398425748551	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCCTTTTTACCAAG	NA	False	NA	3	True	NA	NA	NA	36120246	36147000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979_36145932_36146870
ES.21376.18	chr3	+	3492	12	NIC	ENSMUSG00000027710.15	novel	2905	17	NA	NA	45	88	intron_retention	FALSE	canonical	0	0	junction_6	73.5861781847292	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGCTCCTCCACTTC	NA	False	NA	11	True	AATAAA	-30	NA	36120265	36145609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36129493_36130124_36130204_36130870_36131046_36139562_36139692_36141908_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.19	chr3	+	2755	19	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	164	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.9398425748551	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTGTTAATTTTCCAT	NA	False	NA	22	True	NA	NA	NA	36120384	36147019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979_36145993_36146927
ES.21376.2	chr3	+	2527	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	10	1393	10	88	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGCTCCTCCACTTC	NA	False	NA	11	True	AATAAA	-30	NA	36120137	36145609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.20	chr3	+	5445	17	ISM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	3794	-1870	-2406	1870	3prime_fragment	FALSE	canonical	3	170	junction_1	13.8866786435778	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCTCGGTGGTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	36123921	36148872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.21	chr3	+	3708	16	NIC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	-2396	83	intron_retention	FALSE	canonical	3	170	junction_1	13.1243624183763	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTGTAGTGCTCCTCC	NA	False	NA	6	True	AATAAA	-25	NA	36123931	36145604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.22	chr3	+	2491	16	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	2170	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	49.8226186920492	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATATTAAAGAAAT	NA	False	NA	-11	True	NA	NA	NA	36128497	36146986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979_36146006_36146941
ES.21376.23	chr3	+	5807	8	NIC	ENSMUSG00000027710.15	novel	2905	17	NA	NA	-1513	78	intron_retention	FALSE	canonical	1	12	junction_4	65.0048663798429	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCAAATTGTAGTGCT	NA	False	NA	1	True	AATAAA	-20	NA	36129404	36145599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36131046_36132586_36132661_36134369_36136378_36139562_36139692_36141908_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.24	chr3	+	1688	8	NNC	ENSMUSG00000027710.15	novel	2905	17	NA	NA	-3821	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.1124583029337	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATATTAAAGAAAT	NA	False	NA	-11	True	NA	NA	NA	36139561	36146986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979_36146002_36146937
ES.21376.25	chr3	+	1754	5	ISM	ENSMUSG00000027710.15	ENSMUST00000195896.5	1853	9	8335	-1093	-678	-608	3prime_fragment	FALSE	canonical	3	179	junction_3	8.8423695919137	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAATGCGTGGATACT	NA	False	NA	NA	False	NA	NA	NA	36142704	36146394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.26	chr3	+	1473	4	ISM	ENSMUSG00000027710.15	ENSMUST00000195896.5	1853	9	8634	-911	-379	691	3prime_fragment	FALSE	canonical	3	179	junction_2	7.87400787401181	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGTAGTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	36143003	36146212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.3	chr3	+	3012	19	NNC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	16	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.9398425748551	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTGTGACATAGTTT	NA	False	NA	39	True	NA	NA	NA	36120143	36147036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979_36146006_36146941
ES.21376.4	chr3	+	2974	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	26	930	26	551	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTTGGGAGGGGGTT	NA	False	NA	NA	False	NA	NA	NA	36120153	36146072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.5	chr3	+	7138	13	NNC	ENSMUSG00000027710.15	novel	2905	17	NA	NA	-17	15	intron_retention	FALSE	non_canonical	0	0	junction_10	85.4590138929508	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATTTGTTAATTTTCC	NA	False	NA	20	True	NA	NA	NA	36120198	36147017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36136378_36139562_36139692_36141908_36143996_36144230_36144304_36144979_36146006_36146941
ES.21376.7	chr3	+	3766	16	NIC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	-15	542	intron_retention	FALSE	canonical	1	12	junction_12	47.2009416101934	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	36120200	36146063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141908_36143042_36143480_36143610_36144230_36144304_36144979
ES.21376.9	chr3	+	3957	16	NIC	ENSMUSG00000027710.15	novel	3930	18	NA	NA	1	542	intron_retention	FALSE	canonical	3	170	junction_2	13.590192542173	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	36120221	36146063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36144304_36144979
ES.21377.1	chr3	-	1508	1	Antisense	novelGene_ENSMUSG00000027710.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36127411	36125903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_36125900_36127400
ES.21378.1	chr3	+	2729	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	0	3960	0	3708	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTCAACCGGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	36205165	36220531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21378.10	chr3	+	3012	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	66	-3410	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	36205231	36221074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.11	chr3	+	4478	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	-71	-1935	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.6852484422014	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAACTTAGGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	36205239	36222549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220619_36220813
ES.21378.12	chr3	+	4578	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	75	2036	-70	-2029	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTTGGTTGTTGTTTCA	NA	False	NA	NA	False	AAAAAG	-1	NA	36205240	36222455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21378.13	chr3	+	4984	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	75	1630	-70	-1623	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACAGTTCTGATGTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	36205240	36222861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21378.14	chr3	+	3146	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	-69	-3266	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGCCACAGCATTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	36205241	36221218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.15	chr3	+	6450	5	NNC	ENSMUSG00000033883.12	novel	6503	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.4752764825042	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATATACTACTATTA	NA	False	NA	21	True	AATAAA	-12	NA	36205314	36224484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205456_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.16	chr3	+	3678	1	Intergenic	novelGene_17715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	36207806	36211484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_36207800_36211500
ES.21378.17	chr3	+	4467	2	NNC	ENSMUSG00000033883.12	novel	6503	3	NA	NA	4530	-1623	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACAGTTCTGATGTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	36218200	36222861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36220607_36220800
ES.21378.18	chr3	+	4239	2	NNC	ENSMUSG00000033883.12	novel	6503	3	NA	NA	4751	-1629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGAGAACAGTTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	36218421	36222855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36220619_36220813
ES.21378.19	chr3	+	4780	2	NNC	ENSMUSG00000033883.12	novel	6503	3	NA	NA	5846	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATACTACTATTATTTTA	NA	False	NA	26	True	AATAAA	-17	NA	36219516	36224489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36220607_36220799
ES.21378.2	chr3	+	6508	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	8	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.6852484422014	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGTGTTTTGTCA	NA	False	NA	47	True	AATAAA	-38	NA	36205173	36224510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220629_36220820
ES.21378.3	chr3	+	6157	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	32	-299	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACTGAACAATGTAGA	NA	False	NA	NA	False	NA	NA	NA	36205197	36224185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.4	chr3	+	4408	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	52	-2028	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGGTTGTTGTTTCAT	NA	False	NA	NA	False	AAAAAG	-2	NA	36205217	36222456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.5	chr3	+	6443	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTATTATTTTATG	NA	False	NA	28	True	AATAAA	-19	NA	36205217	36224491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.6	chr3	+	4812	5	NNC	ENSMUSG00000033883.12	novel	6689	4	NA	NA	53	-1623	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_4	13.0479883506999	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACAGTTCTGATGTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	36205218	36222861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204_36220607_36220800
ES.21378.7	chr3	+	3236	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	54	3399	54	-3392	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGTATATATTGAGTT	NA	False	NA	NA	False	AAAAAG	-12	NA	36205219	36221092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21378.8	chr3	+	6633	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	54	2	54	-2	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATACTACTATTATTTTA	NA	False	NA	26	True	AATAAA	-17	NA	36205219	36224489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21378.9	chr3	+	2943	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	61	3685	61	-3678	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACTGTCCAGTGTACA	NA	False	NA	NA	False	NA	NA	NA	36205226	36220806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ES.21379.1	chr3	-	1553	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	175	3	-60	-3	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTGTGTAGGTTTGTG	NA	False	NA	0	True	AATAAA	-18	NA	36529868	36503074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ES.21379.3	chr3	-	1491	12	NNC	ENSMUSG00000027712.14	novel	1731	13	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.7903774619546	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTGTGTAGGTTTGTG	NA	False	NA	0	True	AATAAA	-18	NA	36529817	36503074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519505_36529721
ES.21379.4	chr3	-	1607	12	NNC	ENSMUSG00000027712.14	novel	1731	13	NA	NA	10016	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	30.6834006325923	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCCTGTGTAGGTTTGT	2022	False	NA	-1	True	AATAAA	-17	NA	36519792	36503075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36519559
ES.2138.1	chr1	+	2239	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAACCAAACCAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	184728639	184730878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184728600_184730900
ES.21380.1	chr3	+	1633	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	-13	-3	-13	3	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCCGAATGAGTTCT	NA	False	NA	18	True	AATAAA	-26	NA	36606741	36619879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ES.21380.10	chr3	+	1667	11	NIC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	13	203	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	143.483239439316	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACGACATCATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	36606812	36620079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36606901_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ES.21380.11	chr3	+	1376	10	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	1198	2	1153	-2	3prime_fragment	FALSE	canonical	3	373	junction_9	44.4958036584336	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGAGAGCCGAATGA	NA	False	NA	13	True	AATAAA	-21	NA	36607952	36619874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ES.21380.2	chr3	+	2406	10	NIC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	373	junction_9	46.6153156625694	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGAGAGCCGAATGAG	NA	False	NA	14	True	AATAAA	-22	NA	36606754	36619875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36606901_36607183_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ES.21380.3	chr3	+	1396	10	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	14	2299	6	157	5prime_fragment	FALSE	canonical	3	414	junction_7	35.7118094379623	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACCAGTTGTAAAGAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	36606768	36617577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221
ES.21380.4	chr3	+	1727	11	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	20	2	-1	-2	intron_retention	FALSE	canonical	3	414	junction_7	34.2175393621458	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGAGAGCCGAATGA	NA	False	NA	13	True	AATAAA	-21	NA	36606774	36619874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366
ES.21380.5	chr3	+	1707	11	NIC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	373	junction_10	44.520107816581	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGAGAGCCGAATGA	NA	False	NA	13	True	AATAAA	-21	NA	36606776	36619874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36606901_36607183_36607279_36607954_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ES.21380.6	chr3	+	1540	12	NIC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	4	-12	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	139.294503400838	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTGTAACATCTGAG	NA	False	NA	3	True	AATAAA	-11	NA	36606779	36619864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617261_36617407_36619366_36619446_36619577
ES.21380.7	chr3	+	3962	9	NIC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	414	junction_6	34.7814605788774	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGAGAGCCGAATGA	NA	False	NA	13	True	AATAAA	-21	NA	36606782	36619874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221
ES.21380.8	chr3	+	1316	8	NNC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	-1	1953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	171.904339796342	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGACTTAAGCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	36606785	36613099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36612570
ES.21380.9	chr3	+	1832	10	NNC	ENSMUSG00000027714.12	novel	1617	12	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_8	154.240632906852	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATCTGAGAGCCGAATG	NA	False	NA	12	True	AATAAA	-20	NA	36606788	36619873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36606901_36607183_36607279_36607954_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616320_36617221_36617407_36619366
ES.21381.1	chr3	-	176	1	Intergenic	novelGene_17716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAACCCA	NA	False	NA	NA	False	NA	NA	NA	36616529	36616353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_36616400_36616500
ES.21382.1	chr3	-	2838	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	133	-6	-53	6	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGGCTGTGTGTTGTCT	NA	False	NA	-1	True	AATAAA	-27	NA	36626166	36619007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.11	chr3	-	3101	7	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	973	junction_1	55.850992232308	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACCCATTTGGTGGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	36626115	36619018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.12	chr3	-	3967	5	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	1062	junction_4	32.8205347305616	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTACCCATTTGGTGGG	NA	False	NA	-14	True	AATAAA	-14	NA	36626115	36619020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.13	chr3	-	4364	5	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	973	junction_1	67.8283679591364	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTACCCATTTGGTG	NA	False	NA	-16	True	AATAAA	-12	NA	36626116	36619022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.14	chr3	-	4614	4	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	5	-9	intron_retention	FALSE	canonical	3	1062	junction_3	36.1109401705356	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTACCCATTTGGTG	NA	False	NA	-16	True	AATAAA	-12	NA	36626108	36619022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.15	chr3	-	5023	2	NNC	ENSMUSG00000027715.10	novel	2001	8	NA	NA	1616	-9	intron_retention	FALSE	canonical	0	0	junction_1	0	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTACCCATTTGGTG	NA	False	NA	-16	True	AATAAA	-12	NA	36624084	36619022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36623863_36623901
ES.21382.16	chr3	-	2445	6	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	1	-11	intron_retention	FALSE	canonical	0	0	junction_2	435.149813282736	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTTTACCCATTTGG	NA	False	NA	-18	True	AATAAA	-10	NA	36626112	36619024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36620824_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.17	chr3	-	1821	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	151	993	-35	120	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACCTTCAAATTCTG	NA	False	NA	NA	False	TATAAA	-18	NA	36626148	36620006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.18	chr3	-	1739	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	129	1097	-57	16	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGAGATAAAAATATGAAT	NA	False	NA	0	True	AATAAA	-33	NA	36626170	36620110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.19	chr3	-	1994	7	NIC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	973	junction_1	55.850992232308	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTCAAAGTTAATCTG	NA	False	NA	-16	True	AATAAA	-17	NA	36626116	36620126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.2	chr3	-	2734	9	NNC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	-64	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	362.102885931609	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	36626177	36619014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36620179_36620286_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.20	chr3	-	1531	8	NNC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.918811664471	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTCAAAGTTAATCTG	NA	False	NA	-16	True	AATAAA	-17	NA	36626116	36620126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622077_36622870_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.22	chr3	-	3259	5	NIC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	973	junction_1	67.8283679591364	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTCAAAGTTAATCTG	NA	False	NA	-16	True	AATAAA	-17	NA	36626115	36620126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.23	chr3	-	2932	6	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	973	junction_1	63.7244066272884	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCAAGTCAAAGTTAATC	NA	False	NA	-18	True	AATAAA	-15	NA	36626115	36620128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36620824_36621148_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.24	chr3	-	1149	6	ISM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	184	2215	-2	-1102	5prime_fragment	FALSE	canonical	3	1062	junction_5	33.8727028741434	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCTTAAGTACCTGCCT	NA	False	NA	NA	False	NA	NA	NA	36626115	36621228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.3	chr3	-	4074	6	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	973	junction_1	63.7244066272884	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	36626143	36619014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36620824_36621148_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.4	chr3	-	1546	9	NNC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	362.102885931609	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	36626114	36619014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36619154_36620386_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.5	chr3	-	2666	7	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	5	junction_2	404.313718952663	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	36626115	36619014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36620824_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.7	chr3	-	3752	6	NIC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	6	-2	intron_retention	FALSE	canonical	3	973	junction_1	60.8986042532996	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATTTGGTGGGCTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	36626107	36619015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36620432_36620689_36621263_36621872_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.8	chr3	-	2768	8	NNC	ENSMUSG00000027715.10	novel	2965	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_4	382.918811664471	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCATTTGGTGGGCTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	36626115	36619015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622070_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ES.21382.9	chr3	-	4477	3	NIC	ENSMUSG00000027715.10	novel	1719	9	NA	NA	0	-4	intron_retention	FALSE	canonical	1	14	junction_1	524	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCCATTTGGTGGGCTG	NA	False	NA	-11	True	AATAAA	-17	NA	36626076	36619017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36622961_36624884_36625129_36625786
ES.21383.1	chr3	-	2599	19	NNC	ENSMUSG00000037325.11	novel	2687	19	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	9.58152156786987	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACTTGTGTCTTTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	36667537	36627294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666155_36666227_36667398
ES.21383.3	chr3	-	4315	18	NNC	ENSMUSG00000037325.11	novel	2687	19	NA	NA	-19	-5	intron_retention	FALSE	canonical	0	0	junction_15	11.5593848090039	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATACTTGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	36667557	36627295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36660831_36660941_36661669_36661857_36664328_36666227_36667398
ES.21383.4	chr3	-	1811	6	ISM	ENSMUSG00000037325.11	ENSMUST00000108155.8	2437	18	-96	29699	8	4767	5prime_fragment	FALSE	canonical	3	23	junction_3	5.88557558782486	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTTTGTTTGTAG	NA	False	NA	NA	False	TTTAAA	-5	NA	36667530	36658718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
ES.21383.5	chr3	-	3512	1	NIC	ENSMUSG00000037325.11	novel	2599	19	NA	NA	4998	4561	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGTGTAACCAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	36662436	36658924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_36658900_36662400
ES.21384.1	chr3	-	173	1	Intergenic	novelGene_17717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCAGAGCAAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	36814646	36814473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_36814500_36814600
ES.21385.1	chr3	+	4001	27	NIC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	-12	83	combination_of_known_junctions	FALSE	canonical	3	48	junction_22	8.53958759033583	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCTATATGCATTT	NA	False	NA	NA	False	AATAAA	-21	NA	36917240	36997628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267
ES.21385.10	chr3	+	8735	46	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	21036	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_25	12.6956782770193	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATAGTTGTTTCATATC	NA	False	NA	5	True	AATAAA	-19	NA	37021405	37107165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080379_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.11	chr3	+	8558	46	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	21107	-245	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	12.362707762051	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTTTATGATTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37021476	37106918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.12	chr3	+	8359	43	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	28039	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	12.7313288659856	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCATAGTTGTTTCATAT	NA	False	NA	4	True	AATAAA	-18	NA	37028408	37107164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065683_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.13	chr3	+	8385	44	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	28039	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.025830310315	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTTTCATATCTTT	NA	False	NA	8	True	AATAAA	-22	NA	37028408	37107168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37046825_37046877_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058088_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.15	chr3	+	7270	40	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-19794	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	12.7323119885317	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTTGTTTCATATCT	NA	False	NA	6	True	AATAAA	-20	NA	37041540	37107166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080379_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098806_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.16	chr3	+	4507	27	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-19600	-966	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	9.60091218545922	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGAACTCTATTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	37041734	37091023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805
ES.21385.18	chr3	+	2065	1	NIC	ENSMUSG00000037270.19	novel	15883	86	NA	NA	-19158	-2635	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGAGATTGTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	37042176	37044241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37042200_37044200
ES.21385.19	chr3	+	6670	36	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-12266	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	11.9291787698252	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGTCTCATTTGCTAG	4827	False	NA	22	True	AATAAA	-36	NA	37049068	37107182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.2	chr3	+	4326	18	NIC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	-11	1591	intron_retention	FALSE	canonical	3	50	junction_5	8.85171967340079	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGTAACAAAAGAAAAACC	NA	False	NA	NA	False	AATAAA	-6	NA	36917241	36975888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36974436_36975367
ES.21385.20	chr3	+	6355	34	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-8999	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	11.6370738419633	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATAGTTGTTTCATATC	8094	False	NA	5	True	AATAAA	-19	NA	37052335	37107165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.21	chr3	+	6407	35	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-8999	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.6804704958088	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCATAGTTGTTTCAT	8094	False	NA	2	True	AATAAA	-16	NA	37052335	37107162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37052570_37054158_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.23	chr3	+	6033	33	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	-4610	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	11.7293285586814	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTTGTTTCATATCT	NA	False	NA	6	True	AATAAA	-20	NA	37056724	37107166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095462_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.24	chr3	+	5395	28	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	1251	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	13.1101694577102	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATAGTTGTTTCATATC	NA	False	NA	5	True	AATAAA	-19	NA	37062585	37107165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084898_37086513_37086676_37087413_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.25	chr3	+	4912	26	NNC	ENSMUSG00000037270.19	novel	5236	27	NA	NA	1182	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.409049040126	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATAGTTGTTTCATATC	3329	False	NA	5	True	AATAAA	-19	NA	37067038	37107165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37067160_37068553_37068678_37075595_37075709_37076526_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.26	chr3	+	4647	25	NNC	ENSMUSG00000037270.19	novel	5610	31	NA	NA	1230	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.6011876644845	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCATAGTTGTTTCATAT	3377	False	NA	4	True	AATAAA	-18	NA	37067086	37107164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080379_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087413_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.3	chr3	+	3044	23	NNC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	3	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	15.2938166082336	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCCCTCACCATACTT	NA	False	NA	NA	False	AATAAA	-17	NA	36917257	36985663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36985532
ES.21385.30	chr3	+	5362	17	ISM	ENSMUSG00000037270.19	ENSMUST00000138950.8	4998	27	18938	1	6220	-1	3prime_fragment	FALSE	canonical	3	17	junction_6	9.20512764713233	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCATAGTTGTTTCAT	NA	False	NA	2	True	AATAAA	-16	NA	37084794	37107162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.4	chr3	+	15606	87	NNC	ENSMUSG00000037270.19	novel	15883	86	NA	NA	-7	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_36	24.37583186305	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTTTCATATCTTT	NA	False	NA	8	True	AATAAA	-22	NA	36917262	37107168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991140_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267_36997519_37000396_37000656_37001889_37002728_37003290_37003362_37004031_37004209_37006266_37006388_37007985_37008133_37010787_37010916_37011118_37011319_37012836_37013035_37013485_37013698_37019023_37019176_37019669_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37046825_37046877_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080379_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087413_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.5	chr3	+	5010	30	NIC	ENSMUSG00000037270.19	novel	15883	86	NA	NA	17	1058	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	12.0670934508672	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATTTTATGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	36917286	37003361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991140_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267_36997519_37000396_37000656_37001889_37002728_37003290
ES.21385.6	chr3	+	3874	27	NNC	ENSMUSG00000037270.19	novel	3958	27	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.3792667966579	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTGCCTCTCTGTCTC	NA	False	NA	NA	False	AATAAA	-22	NA	36917304	36997547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_36917429_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941349_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267
ES.21385.7	chr3	+	9761	51	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	13167	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	13.6436945143169	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTTCATATCTTTGT	5122	False	NA	10	True	AATAAA	-24	NA	37013536	37107170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37013698_37019023_37019176_37019669_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065683_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087413_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37096151_37096238_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21385.8	chr3	+	5139	26	NIC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	19366	-1045	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	5.76194411635517	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGCATGGGATATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	37019735	37076958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532
ES.21385.9	chr3	+	9018	46	NNC	ENSMUSG00000037270.19	novel	15541	84	NA	NA	20888	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_30	12.6792140582846	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCATAGTTGTTTCAT	NA	False	NA	2	True	AATAAA	-16	NA	37021257	37107162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087413_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ES.21386.1	chr3	-	5038	30	Antisense	novelGene_ENSMUSG00000037270.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGTCAAGGCGCCAGCG	NA	False	NA	NA	False	NA	NA	NA	37003361	36917264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_36917425_36918531_36918635_36924146_36924272_36928344_36928462_36929596_36929676_36931820_36931887_36939504_36939691_36941365_36941450_36941823_36942018_36943971_36944050_36944941_36945093_36949405_36949564_36949953_36950033_36960838_36960932_36962280_36962397_36971764_36971921_36972598_36972699_36974003_36974183_36974328_36974436_36975367_36975575_36982581_36982811_36985145_36985282_36991137_36991315_36992588_36992722_36994896_36995020_36996329_36996611_36997265_36997518_37000395_37000654_37001887_37002726_37003288
ES.21386.2	chr3	-	5077	28	Antisense	novelGene_ENSMUSG00000037270.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37003361	36923847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_36924272_36928344_36928462_36929596_36929676_36931820_36931887_36939504_36939691_36941365_36941450_36941823_36942018_36943971_36944050_36944941_36945093_36949405_36949564_36949953_36950033_36960838_36960932_36962280_36962397_36971764_36971921_36972598_36972699_36974003_36974183_36974328_36974436_36975367_36975575_36982581_36982811_36985145_36985281_36991133_36991315_36992588_36992722_36994896_36995020_36996329_36996611_36997265_36997518_37000395_37000654_37001887_37002726_37003288
ES.21387.1	chr3	-	4590	3	Antisense	novelGene_ENSMUSG00000037270.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTATATC	NA	False	NA	NA	False	NA	NA	NA	37053930	37046371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_37049131_37050463_37050700_37052335
ES.21388.1	chr3	-	1373	1	Antisense	novelGene_ENSMUSG00000037270.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCCAGA	NA	False	NA	NA	False	AATACA	-38	NA	37099762	37098389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_37098400_37099800
ES.21389.1	chr3	-	1919	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	31	-886	5	13	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCTCTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-39	NA	37366564	37361884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
ES.21389.2	chr3	-	943	4	FSM	ENSMUSG00000045031.19	ENSMUST00000075537.7	762	4	-49	-132	-23	-6	multi-exon	FALSE	canonical	1	1	junction_1	11.7851130197758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTTTAAGTATCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	37366618	37362776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_37363331_37364085_37364215_37364441_37364589_37366505
ES.2139.1	chr1	-	4940	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-373	-346	-373	346	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAATAGCA	-1	True	NA	NA	False	NA	NA	NA	184732140	184628639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.10	chr1	-	3234	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-291	-1287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.737378037449	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCATGAAGTTTATAG	2965	False	NA	NA	False	ATTAAA	-25	NA	184732058	184630272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631074_184632994_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.11	chr1	-	3017	16	NIC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-341	-1287	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	15.6991153324709	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCATGAAGTTTATAG	4	True	NA	NA	False	ATTAAA	-25	NA	184732108	184630272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184731618
ES.2139.12	chr1	-	3170	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-399	1450	-399	-1450	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTCTAGATCTCCACA	7	True	NA	2	True	AATAAA	-24	NA	184732166	184630435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.13	chr1	-	5328	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-284	-1452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.673375837806	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTAGATCTCCA	2972	False	NA	0	True	AATAAA	-22	NA	184732051	184630437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184634199_184636472_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.14	chr1	-	3104	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-394	-1452	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	14.6964675745415	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTAGATCTCCA	12	True	NA	0	True	AATAAA	-22	NA	184732161	184630437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651893_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.16	chr1	-	5402	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-382	-1456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.673375837806	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATAGTTGTCTAGATC	2874	False	NA	-4	True	AATAAA	-18	NA	184732149	184630441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184634199_184636492_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.17	chr1	-	3100	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-372	-1460	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.6048292719321	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGTATAGTTGTCTA	0	True	NA	-8	True	AATAAA	-14	NA	184732139	184630445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640558_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.18	chr1	-	254	1	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGGTAGTAT	NA	False	NA	NA	False	TATAAA	-22	NA	184654280	184654026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_184654000_184654300
ES.2139.2	chr1	-	4470	17	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-357	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.4645511978201	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTTTGCTGCTTGGA	2899	False	NA	2	True	AATAAA	-34	NA	184732124	184628977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651893_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.3	chr1	-	4626	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-399	-6	-399	6	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACCTGTTTGCTGCTTG	7	True	NA	0	True	AATAAA	-32	NA	184732166	184628979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.4	chr1	-	4589	19	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	18.7938786987468	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAATCACCTGTTTGC	2948	False	NA	-6	True	AATAAA	-26	NA	184732075	184628985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184683872_184683933_184731618
ES.2139.6	chr1	-	4557	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-399	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	14.6964675745415	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTGTGAATCACCTGT	7	True	NA	-10	True	AATAAA	-22	NA	184732166	184628989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651893_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.2139.8	chr1	-	3325	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-387	1283	-387	-1283	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATGAAGTTTATAGAAAT	2869	False	NA	NA	False	ATTAAA	-29	NA	184732154	184630268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ES.21390.1	chr3	+	2451	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	-20	2	-20	-2	multi-exon	FALSE	canonical	3	15	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGCCATTCTGTTTT	1231	False	NA	5	True	AATAAA	-17	NA	37366682	37375597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37366735_37373198
ES.21390.2	chr3	+	2643	3	NNC	ENSMUSG00000051444.10	novel	2433	2	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGCCATTCTGTTTT	1250	False	NA	5	True	AATAAA	-17	NA	37366701	37375597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37366735_37369254_37369466_37373198
ES.21390.3	chr3	+	2763	2	NNC	ENSMUSG00000051444.10	novel	2348	2	NA	NA	0	-3612	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGAAGTCTTATAGTG	1253	False	NA	NA	False	ATTAAA	-12	NA	37366704	37371987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37366735_37369254
ES.21390.4	chr3	+	2497	3	NNC	ENSMUSG00000051444.10	novel	2433	2	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCCATTCTGTTTTT	1256	False	NA	6	True	AATAAA	-18	NA	37366707	37375598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37366735_37369254_37369325_37373198
ES.21390.5	chr3	+	2541	2	NNC	ENSMUSG00000051444.10	novel	2433	2	NA	NA	44	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATAACTGCCATTCTGT	1297	False	NA	2	True	AATAAA	-14	NA	37366748	37375594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37366894_37373198
ES.21390.6	chr3	+	3981	1	NIC	ENSMUSG00000051444.10	novel	2433	2	NA	NA	4912	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGCCATTCTGTTTT	4728	False	NA	5	True	AATAAA	-17	NA	37371616	37375597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37371600_37375600
ES.21391.1	chr3	+	2265	1	FSM	ENSMUSG00000083353.2	ENSMUST00000121938.2	319	1	-128	-1818	-128	1818	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATAAAACTCATGGTAC	NA	False	NA	NA	False	TATAAA	-44	NA	37381092	37383357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37381100_37383400
ES.21392.1	chr3	-	201	1	Intergenic	novelGene_17718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAACAGGAGCCACG	NA	False	NA	NA	False	NA	NA	NA	37445462	37445261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_37445300_37445500
ES.21393.1	chr3	+	3333	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-417	0	-1	0	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474043	37633245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ES.21393.10	chr3	+	6521	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	-8	-3597	6	3597	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	37474452	37636842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ES.21393.11	chr3	+	3469	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	10	-589	-4	589	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTACGTGCAAGTTAC	NA	False	NA	NA	False	AAGAAA	-26	NA	37474456	37633834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.12	chr3	+	2229	15	NIC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	117.512591596277	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	False	NA	5	True	AATAAA	-14	NA	37474459	37633239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.13	chr3	+	3910	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	21	-1041	7	1041	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTGCTGTCAGACTA	NA	False	NA	NA	False	AATGAA	-15	NA	37474467	37634286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.14	chr3	+	5617	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	429	-2751	13	2751	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTTACTTTTGACAT	NA	False	NA	NA	False	AAAACA	-18	NA	37474473	37635996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.15	chr3	+	2764	16	NNC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	113.266529330896	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	37474475	37633244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502613_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.16	chr3	+	2897	17	NNC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	141.605953595709	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	False	NA	5	True	AATAAA	-14	NA	37474475	37633239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37614647_37614687_37632900
ES.21393.17	chr3	+	7340	16	NNC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	16	16972	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	148.538749153209	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTCCAGGTTCAGTT	NA	False	NA	NA	False	GATAAA	-15	NA	37474476	37650217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37645189_37648836_37648876
ES.21393.18	chr3	+	2774	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	16	126	16	-39	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTTTGTCTTGAGAG	NA	False	NA	NA	False	NA	NA	NA	37474476	37633119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ES.21393.19	chr3	+	2837	16	NNC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	113.266529330896	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCTAGTTTTATCTTG	NA	False	NA	6	True	AATAAA	-15	NA	37474476	37633240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502691_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.2	chr3	+	3289	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	8	-2	8	2	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTATCTTGTGCTTTT	NA	False	NA	13	True	AATAAA	-22	NA	37474052	37633247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.21	chr3	+	2618	15	NNC	ENSMUSG00000027722.15	novel	599	5	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.453599871474	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	False	NA	5	True	AATAAA	-14	NA	37474682	37633239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37474785_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
ES.21393.22	chr3	+	4564	12	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	11503	-2384	-257	2384	3prime_fragment	FALSE	canonical	3	356	junction_6	34.1769822497903	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCTGTGTGTCTTG	4234	False	NA	NA	False	NA	NA	NA	37485949	37635629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.23	chr3	+	1703	11	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	12839	1	1079	-1	3prime_fragment	FALSE	canonical	3	356	junction_5	34.8367621916848	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	5570	False	NA	10	True	AATAAA	-19	NA	37487285	37633244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21393.24	chr3	+	639	3	ISM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	44231	1	12808	-1	3prime_fragment	FALSE	canonical	3	382	junction_1	15	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTTATCTTGTGCT	NA	False	NA	10	True	AATAAA	-19	NA	37518677	37633244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_37518808_37582306_37582472_37632900
ES.21393.25	chr3	+	3716	1	Intergenic	novelGene_17719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACAAAATTAGAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	37530776	37534492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37530800_37534500
ES.21393.6	chr3	+	2733	15	NIC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_14	113.124998590596	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	False	NA	5	True	AATAAA	-14	NA	37474435	37633239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
ES.21393.8	chr3	+	6504	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	392	-3601	-10	3601	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	37474436	37636846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ES.21394.1	chr3	-	1093	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-6	68	-6	4	multi-exon	FALSE	canonical	1	4	junction_4	11.8743420870379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTAATCCTCACTGGGT	NA	False	NA	-6	True	AATAAA	-23	NA	37473751	37459126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ES.21394.2	chr3	-	1560	5	NNC	ENSMUSG00000050174.16	novel	1155	5	NA	NA	336	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.490737563232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	-18	True	AATAAA	-11	NA	37473370	37459138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37472630
ES.21394.3	chr3	-	1245	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	-61	80	-36	-4	multi-exon	FALSE	canonical	2	6	junction_4	11.0792599030802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGATTGTAGCTCTAA	NA	False	NA	-18	True	AATAAA	-11	NA	37474396	37459138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
ES.21394.4	chr3	-	3519	4	ISM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	-9	82	-9	-6	intron_retention	FALSE	canonical	3	22	junction_1	5.24933858267454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAGATTGTAGCTCT	NA	False	NA	-20	True	AATAAA	-9	NA	37473754	37459140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849
ES.21395.1	chr3	-	2628	1	Intergenic	novelGene_17720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGCTTACGTGCTGGAT	NA	False	NA	NA	False	NA	NA	NA	37578688	37576060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_37576100_37578700
ES.21396.1	chr3	+	2522	3	FSM	ENSMUSG00000037211.13	ENSMUST00000108109.8	2451	3	-71	0	-71	0	multi-exon	FALSE	canonical	3	36	junction_1	4	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694024	37698747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37694214_37694668_37694958_37696703
ES.21396.10	chr3	+	2196	2	NIC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	-36	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694059	37698745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37694214_37696703
ES.21396.11	chr3	+	2238	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694060	37698747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_37694255_37696703
ES.21396.12	chr3	+	1174	4	NNC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.1369334592098	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694061	37698745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37694214_37694668_37694958_37696703_37696810_37698118
ES.21396.13	chr3	+	2230	3	NNC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCGAGTGCATCTTTTT	NA	False	NA	NA	False	AATATA	-17	NA	37694068	37698745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37694214_37694668_37694712_37696703
ES.21396.2	chr3	+	4707	1	Genic_Genomic	ENSMUSG00000037211.13	novel	NA	NA	NA	NA	-55	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694040	37698747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_37694000_37698700
ES.21396.3	chr3	+	2955	2	FSM	ENSMUSG00000037211.13	ENSMUST00000108107.2	2773	2	-182	0	-49	0	multi-exon	FALSE	canonical	3	44	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694046	37698747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37694958_37696703
ES.21396.4	chr3	+	2538	3	FSM	ENSMUSG00000037211.13	ENSMUST00000038569.8	2481	3	-57	0	-46	0	multi-exon	FALSE	canonical	3	34	junction_1	5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694049	37698747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37694255_37694668_37694958_37696703
ES.21396.5	chr3	+	3372	2	NNC	ENSMUSG00000037211.13	novel	2773	2	NA	NA	-45	-171	intron_retention	FALSE	canonical	1	1	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGAATCTCTATTATTTT	NA	False	NA	NA	False	NA	NA	NA	37694050	37698576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_37695550_37696703
ES.21396.6	chr3	+	1308	1	Genic_Genomic	ENSMUSG00000037211.13	novel	NA	NA	NA	NA	-43	-3387	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGCCGTGCCCACGTC	NA	False	NA	NA	False	ATTAAA	-26	NA	37694052	37695360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_37694100_37695400
ES.21396.7	chr3	+	5470	3	FSM	ENSMUSG00000037211.13_ENSMUSG00000106062.2	ENSMUST00000108109.8	2451	3	-40	-2979	-40	-375	multi-exon	FALSE	canonical	3	36	junction_1	4	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTATGTTTGTGCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	37694055	37701726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37694214_37694668_37694958_37696703
ES.21396.8	chr3	+	2775	3	FSM	ENSMUSG00000037211.13_ENSMUSG00000106062.2	ENSMUST00000038569.8	2481	3	-48	-246	-37	246	multi-exon	FALSE	canonical	3	34	junction_1	5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGTAAGTTTTGT	NA	False	NA	NA	False	GATAAA	-13	NA	37694058	37698993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37694255_37694668_37694958_37696703
ES.21396.9	chr3	+	4270	2	ISM	ENSMUSG00000037211.13	ENSMUST00000038569.8	2481	3	-48	5	-37	-5	intron_retention	FALSE	canonical	3	34	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCGAGTGCATCTT	NA	False	NA	NA	False	AATATA	-14	NA	37694058	37698742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_37694255_37694668
ES.21397.1	chr3	-	1652	1	FSM	ENSMUSG00000104605.2	ENSMUST00000195887.2	2078	1	-244	670	-244	-670	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTAGTAAGCTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	37695049	37693397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_37693400_37695000
ES.21398.1	chr3	+	4359	1	Intergenic	novelGene_17721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAAAAAAGTCTGTT	NA	False	NA	NA	False	AAAAAG	-37	NA	37703724	37708083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37703700_37708100
ES.21399.1	chr3	+	2235	3	Intergenic	novelGene_17722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAACAAACAAA	8238	False	NA	NA	False	NA	NA	NA	37722946	37761114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37723216_37731296_37733074_37760925
ES.21399.2	chr3	+	593	3	Intergenic	novelGene_17723	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.5	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTGACGTTGTAT	8249	False	NA	NA	False	ATTAAA	-28	NA	37722957	37902453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37723216_37883140_37883275_37902252
ES.21399.3	chr3	+	143	1	Intergenic	novelGene_17724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	37752587	37752730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37752600_37752700
ES.21399.4	chr3	+	503	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	-30	-48	-30	48	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	7634	False	NA	NA	False	AATAAA	-14	NA	37768858	37769361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_37768900_37769400
ES.214.1	chr1	-	177	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31033759	31033582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_31033600_31033800
ES.2140.1	chr1	+	171	1	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	184801730	184801901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184801700_184801900
ES.21400.1	chr3	-	350	1	Intergenic	novelGene_17725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	37871630	37871280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_37871300_37871600
ES.21401.1	chr3	+	171	1	Intergenic	novelGene_17726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTCTGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	37902653	37902824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_37902700_37902800
ES.21402.1	chr3	-	177	1	Intergenic	novelGene_17727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGATTGG	NA	False	NA	NA	False	NA	NA	NA	38251840	38251663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_38251700_38251800
ES.21403.1	chr3	-	8505	5	NIC	ENSMUSG00000044864.17	novel	4945	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCCCTTCTCTGGA	NA	False	NA	NA	False	AATAAA	-22	NA	38539008	38503407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
ES.21403.2	chr3	-	8072	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAAGCCTGAGTCCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	38538999	38503414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
ES.21403.3	chr3	-	8113	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGTTTAATTTCGT	NA	False	NA	NA	False	AATAAA	-20	NA	38539008	38503799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
ES.21403.4	chr3	-	7686	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGCCTTGGTTTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	38539002	38503803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
ES.21403.5	chr3	-	2116	4	FSM	ENSMUSG00000044864.17	ENSMUST00000120875.8	4945	4	21	2808	-8	12	multi-exon	FALSE	canonical	1	1	junction_1	18.4451137763426	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTCAGCATTGGATAA	NA	False	NA	0	True	AATAAA	-29	NA	38538972	38506215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_38506655_38517048_38517279_38536839_38538134_38538819
ES.21403.6	chr3	-	5720	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-38	12	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTCAGCATTGGATAA	NA	False	NA	0	True	AATAAA	-29	NA	38539031	38506215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
ES.21403.8	chr3	-	5267	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCCACTAACCTTCAG	NA	False	NA	-10	True	AATAAA	-19	NA	38539005	38506225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
ES.21403.9	chr3	-	5473	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	7	-190	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCGGTTTTGAGTATTT	NA	False	NA	NA	False	AATAAA	-34	NA	38538986	38506417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
ES.21404.1	chr3	-	1064	1	FSM	ENSMUSG00000050533.4	ENSMUST00000056409.4	598	1	446	-912	446	912	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	39412606	39411542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_39411500_39412600
ES.21405.1	chr3	+	5735	7	Intergenic	novelGene_17728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_6	2.21108319357027	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGAATGGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	40510550	40522210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_40510872_40511877_40511978_40512401_40512528_40512834_40513038_40514101_40514149_40514620_40519151_40521802
ES.21405.2	chr3	+	1379	6	Intergenic	novelGene_17729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	2.03960780543711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTTAACAATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40510552	40515204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_40510872_40511877_40511978_40512401_40512528_40512834_40513038_40514101_40514149_40514620
ES.21405.3	chr3	+	1893	6	Intergenic	novelGene_17730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	2.03960780543711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCTTGATGCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	40510577	40515743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_40510872_40511877_40511978_40512401_40512528_40512834_40513038_40514101_40514149_40514620
ES.21405.4	chr3	+	1497	5	Intergenic	novelGene_17731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTCTTTGCTTATT	NA	False	NA	NA	False	AATACA	-19	NA	40510587	40515359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_40510734_40511877_40511978_40512572_40513038_40514101_40514149_40514620
ES.21406.1	chr3	+	6401	16	FSM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	-13	-1	-13	1	multi-exon	FALSE	canonical	3	12	junction_15	25.5603860169078	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGTATTATGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	40594902	40659205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ES.21406.10	chr3	+	6157	17	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	10	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.5364323075875	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATGTTTGCCTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	40594925	40659212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647022_40647249_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ES.21406.12	chr3	+	2587	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	48711	14	1447	5prime_fragment	FALSE	canonical	3	119	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGTTTCAATTCATTT	NA	False	NA	NA	False	TTTAAA	-7	NA	40594929	40610493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135
ES.21406.13	chr3	+	5891	16	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	26.9687885444555	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCAGTATTATGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	40594929	40659204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40608135_40608684_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631_40657076_40657471
ES.21406.14	chr3	+	1294	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	14	50004	14	154	5prime_fragment	FALSE	canonical	3	119	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAGTATTTTTGC	NA	False	NA	NA	False	AATACA	-11	NA	40594929	40609200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135
ES.21406.17	chr3	+	3421	4	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	16	29644	16	-17394	5prime_fragment	FALSE	canonical	3	18	junction_2	47.1475226166645	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTATTTTGTTCTTAAT	NA	False	NA	NA	False	ACTAAA	-16	NA	40594931	40629560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000
ES.21406.18	chr3	+	805	3	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	17	18642	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCATTCAGGTATTCT	NA	False	NA	NA	False	AATAAA	-15	NA	40594932	40627688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40627000_40627463_40627571
ES.21406.19	chr3	+	9561	14	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	16657	3152	-15478	-3152	3prime_fragment	FALSE	canonical	3	12	junction_13	6.39248819517438	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGGGTTCATATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	40611572	40656052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ES.21406.2	chr3	+	6005	17	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	25.5364323075875	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGTATTATGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	40594902	40659205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631_40657076_40657471
ES.21406.3	chr3	+	1187	2	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	-12	50137	-12	21	5prime_fragment	FALSE	canonical	3	119	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTGGAGTGGCTGTA	NA	False	NA	22	True	AATAAA	-38	NA	40594903	40609067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135
ES.21406.4	chr3	+	1093	3	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	0	40213	0	9945	5prime_fragment	FALSE	canonical	3	18	junction_2	50.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCAGCAGCAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	40594915	40618991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135_40608684_40618689
ES.21406.5	chr3	+	6307	15	NIC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	5	11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	27.1455825699362	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTGCCTTTAAAAAT	NA	False	NA	NA	False	AATAAA	-27	NA	40594920	40659215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40595159_40608135_40608684_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ES.21406.6	chr3	+	3273	17	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	5	-3148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.1264204159315	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTTCATATTTTAATCAT	NA	False	NA	NA	False	AATAAA	-23	NA	40594920	40656056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40608135_40608684_40617697_40617737_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ES.21406.7	chr3	+	1878	9	NNC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	6	-8141	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	35.0249910778004	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGGCTGAGAGAGCAAT	NA	False	NA	NA	False	TTTAAA	-13	NA	40594921	40638813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40638487
ES.21406.8	chr3	+	1348	3	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	7	39951	7	10207	5prime_fragment	FALSE	canonical	3	18	junction_2	50.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATATTCTCCACCTTA	NA	False	NA	NA	False	NA	NA	NA	40594922	40619253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135_40608684_40618689
ES.21406.9	chr3	+	2414	4	ISM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	10	30657	10	-18407	5prime_fragment	FALSE	canonical	3	18	junction_2	47.1475226166645	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATAATTTGTAGCTA	NA	False	NA	NA	False	AATAAA	-13	NA	40594925	40628547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000
ES.21407.1	chr3	+	4556	4	NIC	ENSMUSG00000069041.9	novel	2128	6	NA	NA	-3	563	intron_retention	FALSE	canonical	3	19	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGTATAGTTTCTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40663281	40681090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40663657_40670945_40671074_40674920_40677182_40679298
ES.21407.2	chr3	+	2664	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	28	-564	28	564	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTATAGTTTCTGTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	40663312	40681091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
ES.21407.3	chr3	+	1589	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	37	502	37	-502	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGAGCCTTTTTCCCC	NA	False	NA	NA	False	AATAAA	-17	NA	40663321	40680025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
ES.21408.1	chr3	+	9771	1	Intergenic	novelGene_17732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTAACTTTTGTGTATTTG	NA	False	NA	NA	False	NA	NA	NA	40686290	40696061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_40686300_40696100
ES.21409.1	chr3	+	5135	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	-119	4463	-71	2056	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAATTATCTTCCT	NA	False	NA	NA	False	AATAAA	-28	NA	40699742	40746075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.2	chr3	+	2953	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	-104	6630	-56	-111	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTACTTTTGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	40699757	40743908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.3	chr3	+	4381	19	NNC	ENSMUSG00000025757.14	novel	9479	19	NA	NA	-22	1457	intron_retention	FALSE	non_canonical	0	0	junction_6	7.14337299724561	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGATATCAGTTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	40699893	40745476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715344_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.4	chr3	+	3776	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	32	5671	-22	848	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCCTTTTGAAAAC	NA	False	NA	-1	True	ATTAAA	-16	NA	40699893	40744867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.5	chr3	+	5678	18	NIC	ENSMUSG00000025757.14	novel	9479	19	NA	NA	-19	851	intron_retention	FALSE	canonical	3	15	junction_15	4.6032935403562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCTTTTGAAAACTTG	NA	False	NA	2	True	ATTAAA	-19	NA	40699896	40744870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.6	chr3	+	7290	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	38	2151	-16	-2151	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGAAGTAGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	40699899	40748387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.8	chr3	+	9421	19	NNC	ENSMUSG00000025757.14	novel	9479	19	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.19160175499653	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTTTGCACACCAG	NA	False	NA	9	True	AATAAA	-25	NA	40699907	40750538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733778_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ES.21409.9	chr3	+	3655	1	NIC	ENSMUSG00000025757.14	novel	1949	15	NA	NA	9102	28	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGCAAACAAATTGCTTAA	475	False	NA	NA	False	NA	NA	NA	40709401	40713056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40709400_40713100
ES.2141.1	chr1	+	1387	4	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACGGAACTGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	184907004	184911654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184907115_184910128_184910329_184910515_184910974_184911035
ES.21410.10	chr3	+	3943	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	256	junction_9	37.4569821288913	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7788	False	NA	25	True	AATAAA	-21	NA	40754456	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.11	chr3	+	3470	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-21	intron_retention	FALSE	canonical	0	0	junction_12	120.692557075129	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	7788	False	NA	5	True	AATAAA	-1	NA	40754456	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756223_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767145_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.12	chr3	+	3189	14	ISM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	3	2903	3	-2437	5prime_fragment	FALSE	canonical	3	256	junction_10	34.8756031103075	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCATGGTGCTTGGAGC	7788	False	NA	NA	False	AGTAAA	-12	NA	40754456	40768415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900
ES.21410.13	chr3	+	3430	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-1	intron_retention	FALSE	canonical	2	5	junction_5	92.9457189259767	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7788	False	NA	25	True	AATAAA	-21	NA	40754456	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760965_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.17	chr3	+	3368	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	2	-3	intron_retention	FALSE	canonical	1	1	junction_2	96.5421553265828	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGGTTTATTGGCTA	7796	False	NA	23	True	AATAAA	-19	NA	40754464	40771314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.18	chr3	+	3483	6	FSM	ENSMUSG00000025758.11	ENSMUST00000204594.3	3403	6	2	-82	2	82	multi-exon	FALSE	canonical	3	324	junction_5	17.4745529270422	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTCTGTTGTTTAAAA	7796	False	NA	NA	False	AATAAA	-17	NA	40754464	40762930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921
ES.21410.19	chr3	+	4604	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	2	-31	intron_retention	FALSE	canonical	3	256	junction_9	37.9048217276388	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAAACACAGTGGTA	7796	False	NA	-5	True	AATACA	-5	NA	40754464	40771286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.2	chr3	+	3363	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	-33	149	-33	-17	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTTCAATTTTTGAA	7752	False	NA	NA	False	NA	NA	NA	40754420	40771169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.20	chr3	+	3339	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-1	intron_retention	FALSE	canonical	2	2	junction_13	94.1949779847685	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7797	False	NA	25	True	AATAAA	-21	NA	40754465	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40769416_40769524_40770749
ES.21410.21	chr3	+	3960	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-2	intron_retention	FALSE	canonical	3	304	junction_6	28.4576305179099	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTTATTGGCTAA	7797	False	NA	24	True	AATAAA	-20	NA	40754465	40771315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.22	chr3	+	3051	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	14	414	5	52	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATTTTTTAAATTT	7799	False	NA	NA	False	AATAAA	-23	NA	40754467	40770904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.23	chr3	+	4175	17	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-4	1285	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_16	88.883965792487	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTACAAATAAATCTTCAAC	7804	False	NA	NA	False	AATAAA	-19	NA	40754472	40772603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749_40770905_40771474
ES.21410.24	chr3	+	8785	10	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	256	junction_8	40.316647910825	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGGTTTATTGGCTA	7805	False	NA	23	True	AATAAA	-19	NA	40754473	40771314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40769524_40770749
ES.21410.25	chr3	+	7217	11	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-1	-21	intron_retention	FALSE	canonical	3	304	junction_6	27.3576314764272	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	7807	False	NA	5	True	AATAAA	-1	NA	40754475	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40766621_40767165
ES.21410.26	chr3	+	3619	14	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-1	52	intron_retention	FALSE	canonical	3	304	junction_6	29.4602329495845	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATTTTTTAAATTT	7807	False	NA	NA	False	AATAAA	-23	NA	40754475	40770904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.28	chr3	+	4760	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	23	-1304	0	1304	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAATGGTAGTCAGATC	7808	False	NA	NA	False	AATAAA	-38	NA	40754476	40772622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.29	chr3	+	4282	1	FSM	ENSMUSG00000025758.11	ENSMUST00000204289.2	1582	1	0	-2700	0	-690	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAAACTATTTTGATA	7808	False	NA	NA	False	NA	NA	NA	40754476	40758758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754500_40758800
ES.21410.3	chr3	+	3518	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	-33	-6	-33	6	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGCTAAATACTTGTT	7752	False	NA	33	True	AATAAA	-29	NA	40754420	40771324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.30	chr3	+	3981	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_6	93.0037036299571	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7808	False	NA	27	True	AATAAA	-23	NA	40754476	40771318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40762656_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.32	chr3	+	2941	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	48	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	96.5421553265828	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTAAGTGATTTTTTAA	7809	False	NA	NA	False	AATAAA	-19	NA	40754477	40770900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.33	chr3	+	3318	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	-2	intron_retention	FALSE	canonical	1	6	junction_10	93.9368002913639	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTTATTGGCTAA	7809	False	NA	24	True	AATAAA	-20	NA	40754477	40771315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.35	chr3	+	4799	15	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_5	94.5335757219386	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7809	False	NA	25	True	AATAAA	-21	NA	40754477	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760965_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40769524_40770749
ES.21410.36	chr3	+	3118	14	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	-21	intron_retention	FALSE	canonical	0	0	junction_12	128.505289647764	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	7809	False	NA	5	True	AATAAA	-1	NA	40754477	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760965_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40769416_40769524_40770749
ES.21410.37	chr3	+	3305	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_9	95.5102569553316	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7809	False	NA	27	True	AATAAA	-23	NA	40754477	40771318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.38	chr3	+	4417	14	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	304	junction_6	28.3993082672655	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTTATTGGCTAA	7809	False	NA	24	True	AATAAA	-20	NA	40754477	40771315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.39	chr3	+	3104	17	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	91.1084518582113	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGGTTTATTGGCTA	7810	False	NA	23	True	AATAAA	-19	NA	40754478	40771314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749_40770905_40771250
ES.21410.40	chr3	+	1752	7	NNC	ENSMUSG00000025758.11	novel	3403	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	129.26383441972	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7811	False	NA	NA	False	NA	NA	NA	40754479	40762848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40762656
ES.21410.41	chr3	+	4026	14	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	4	-1	intron_retention	FALSE	canonical	3	304	junction_6	29.4602329495845	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7812	False	NA	25	True	AATAAA	-21	NA	40754480	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.43	chr3	+	3510	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	4	-21	intron_retention	FALSE	canonical	3	256	junction_10	37.9330774832064	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	7812	False	NA	5	True	AATAAA	-1	NA	40754480	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.45	chr3	+	2946	16	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	4	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	123.641129438747	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTAACTTGGTTTAT	7812	False	NA	17	True	AATAAA	-13	NA	40754480	40771308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749_40770905_40771250
ES.21410.46	chr3	+	3558	17	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	120.051535157823	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7813	False	NA	25	True	AATAAA	-21	NA	40754481	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40756778_40756888_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.47	chr3	+	7677	10	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	0	-21	intron_retention	FALSE	canonical	3	304	junction_6	28.0030862496649	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	7816	False	NA	5	True	AATAAA	-1	NA	40754484	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40766621_40767165
ES.21410.48	chr3	+	3415	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	35	-1	intron_retention	FALSE	canonical	0	0	junction_2	93.5776801498211	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7855	False	NA	25	True	AATAAA	-21	NA	40754523	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755539_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.49	chr3	+	4946	14	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-68	-29	intron_retention	FALSE	canonical	3	304	junction_6	29.5300468783755	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACACAGTGGTAAG	7952	False	NA	-3	True	AATACA	-7	NA	40754620	40771288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40764817_40765096_40765200_40765668_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.5	chr3	+	3041	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-22	50	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	92.9457189259767	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTGATTTTTTAAAT	7763	False	NA	NA	False	AATAAA	-21	NA	40754431	40770902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760965_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.50	chr3	+	3030	16	NIC	ENSMUSG00000025758.11	novel	404	5	NA	NA	-143	48	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.2217428142884	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTAAGTGATTTTTTAA	8404	False	NA	NA	False	AATAAA	-19	NA	40755072	40770900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40755307_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.51	chr3	+	2804	14	ISM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	1775	305	331	161	3prime_fragment	FALSE	canonical	3	256	junction_8	38.3137159304911	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGTGGTCATAAGGCT	9560	False	NA	NA	False	AATAAA	-36	NA	40756228	40771013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.52	chr3	+	4282	10	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	4103	-2	intron_retention	FALSE	canonical	2	5	junction_1	112.254450817752	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTTTATTGGCTAA	NA	False	NA	24	True	AATAAA	-20	NA	40760000	40771315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40760356_40760965_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40769524_40770749
ES.21410.53	chr3	+	7293	8	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	4442	0	intron_retention	FALSE	canonical	3	256	junction_3	46.06428516049	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	NA	False	NA	27	True	AATAAA	-23	NA	40760339	40771318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40769524_40770749
ES.21410.54	chr3	+	5090	8	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	5327	0	intron_retention	FALSE	canonical	0	0	junction_3	129.826257524652	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	NA	False	NA	27	True	AATAAA	-23	NA	40761224	40771318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40763544_40764711_40764817_40765096_40765200_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40769524_40770749
ES.21410.55	chr3	+	5893	7	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	5516	-21	intron_retention	FALSE	canonical	3	322	junction_4	32.6381678407352	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTAAGTTTTCCTT	NA	False	NA	5	True	AATAAA	-1	NA	40761413	40771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40764817_40765096_40765200_40765668_40766449_40766528_40766621_40767165_40768027_40769416_40769524_40770749
ES.21410.6	chr3	+	4555	14	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_5	100.628439520032	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7774	False	NA	25	True	AATAAA	-21	NA	40754442	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40763181_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.8	chr3	+	3444	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_11	93.9296190417769	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	7788	False	NA	25	True	AATAAA	-21	NA	40754456	40771316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766419_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ES.21410.9	chr3	+	4862	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	3	-3	intron_retention	FALSE	canonical	3	256	junction_10	35.9895109435955	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGGTTTATTGGCTA	7788	False	NA	23	True	AATAAA	-19	NA	40754456	40771314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40769524_40770749
ES.21411.1	chr3	-	4111	13	NNC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	30	1232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.7434970184448	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTGTTTATTTTATA	NA	False	NA	NA	False	AATAAA	-19	NA	40801099	40771305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40785399_40785453_40786447_40786593_40788378_40788493_40789603_40789741_40791523_40791568_40793848_40793941_40801075
ES.21411.2	chr3	-	3119	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	70	-38	1	38	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGTAAGAATCTGTCA	NA	False	NA	54	True	AATACA	-16	NA	40801250	40772499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ES.21411.4	chr3	-	2787	11	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	-11	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	11.1427106217473	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATCTGTCATATTTCC	NA	False	NA	-8	True	AATAAA	-10	NA	40801140	40772561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40786447_40786593_40788378_40788493_40789603_40789741_40791523_40791568_40793848_40793941_40801075
ES.21411.5	chr3	-	2806	12	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	25	-25	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	8.60616730621008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATCTGTCATATTTC	NA	False	NA	-9	True	AATAAA	-9	NA	40801104	40772562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789741_40791523_40791568_40793848_40793941_40801075
ES.21411.6	chr3	-	5595	9	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	7031	-99	intron_retention	FALSE	canonical	3	17	junction_5	6.99888383958471	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCATTTACTGTTGAAG	NA	False	NA	-83	True	GATAAA	-17	NA	40793938	40772636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40791568_40793848
ES.21411.7	chr3	-	2877	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	175	99	-16	-99	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCATTTACTGTTGAAG	NA	False	NA	-83	True	GATAAA	-17	NA	40801145	40772636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ES.21411.8	chr3	-	2023	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	112	1016	29	389	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACCATTCTTTCCACC	NA	False	NA	NA	False	AATAAA	-17	NA	40801208	40773553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ES.21411.9	chr3	-	1635	11	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	31	352	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	9.64831591522583	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTTCCTAATGAAATAA	NA	False	NA	NA	False	AATAAA	-14	NA	40801098	40773590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40791523_40791568_40793848_40793941_40801075
ES.21412.1	chr3	-	2822	1	Antisense	novelGene_ENSMUSG00000107741.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	40817709	40814887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_40814900_40817700
ES.21413.1	chr3	-	9831	3	FSM	ENSMUSG00000097583.3_ENSMUSG00000107892.2	ENSMUST00000181813.2	1032	3	91	-8890	91	-30	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGTGGGATTTGGAGCA	6820	False	NA	NA	False	AATAAA	-23	NA	40848467	40831441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_40841144_40841989_40842034_40848382
ES.21414.1	chr3	+	1268	1	Genic_Genomic	ENSMUSG00000037818.17	novel	NA	NA	NA	NA	-20	-21675	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTCCTATGTTATGG	NA	False	NA	NA	False	AATAAA	-19	NA	40848559	40849827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_40848600_40849800
ES.21414.10	chr3	+	1467	1	NIC	ENSMUSG00000037818.17	novel	2492	13	NA	NA	-2301	-5218	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	40864817	40866284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40864800_40866300
ES.21414.11	chr3	+	1458	4	NNC	ENSMUSG00000037818.17	novel	2492	13	NA	NA	-7132	-599	intron_retention	FALSE	canonical	0	0	junction_1	7.54247233265651	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAATTGTTGAAACTAA	NA	False	NA	NA	False	AATAAA	-20	NA	40877847	40890143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40877987_40885315_40885418_40887962_40888338_40889301
ES.21414.12	chr3	+	5040	4	NNC	ENSMUSG00000037818.17	novel	2492	13	NA	NA	-3098	0	intron_retention	FALSE	canonical	0	0	junction_1	8.33999733546453	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGGGTTCTGTCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	40881881	40890742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40885418_40887962_40888338_40889301_40889465_40889776
ES.21414.2	chr3	+	4362	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-84	-1001	-25	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	40848672	40892573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.3	chr3	+	2511	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-62	828	-3	2	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGGTTCTGTCAGACA	NA	False	NA	NA	False	AATAAA	-16	NA	40848694	40890744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.4	chr3	+	4484	15	NNC	ENSMUSG00000037818.17	novel	3277	13	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.786660318019	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTATTTGCTTTGTGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	40848695	40892567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40848879_40850287_40850387_40859320_40859429_40860306_40860392_40860601_40860654_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.5	chr3	+	4437	13	FSM	ENSMUSG00000037818.17	ENSMUST00000205065.3	3393	13	-61	-983	0	1	multi-exon	FALSE	canonical	0	0	junction_6	7.57554545157567	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTTGTGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40848697	40892572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871503_40873822_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.6	chr3	+	2802	7	ISM	ENSMUSG00000037818.17	ENSMUST00000204496.3	4144	12	-6	19061	-6	27	5prime_fragment	FALSE	canonical	2	4	junction_3	10.0940026198178	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40848705	40873510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40848879_40859320_40859429_40860306_40860392_40860601_40860654_40864937_40865039_40871120_40871200_40871306
ES.21414.7	chr3	+	4918	12	NIC	ENSMUSG00000037818.17	novel	3393	13	NA	NA	-3	2	intron_retention	FALSE	canonical	3	14	junction_6	4.64793564769608	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGGTTCTGTCAGACA	NA	False	NA	NA	False	AATAAA	-16	NA	40848708	40890744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.8	chr3	+	1970	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108077.10	3277	13	-42	1349	3	-519	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTCGTGTCTATCCT	NA	False	NA	NA	False	NA	NA	NA	40848714	40890223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ES.21414.9	chr3	+	2741	1	Antisense	novelGene_ENSMUSG00000074619.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATTTGAGAAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	40856060	40858801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_40856100_40858800
ES.21415.1	chr3	+	4141	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-59	-1585	-59	1574	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGACTGAATTTATTT	9958	False	NA	11	True	NA	NA	NA	40904203	40933802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.10	chr3	+	2424	11	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	38.5783618107353	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTTAACTCCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	40904264	40988675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40978879_40978987_40987820_40987982_40988379
ES.21415.11	chr3	+	5031	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	2	-2536	2	2525	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTAACATGTTCAG	NA	False	NA	NA	False	AATAAA	-34	NA	40904264	40934753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.12	chr3	+	3922	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	19	1574	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	29.4806610339728	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGACTGAATTTATTT	NA	False	NA	11	True	NA	NA	NA	40904281	40933802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.13	chr3	+	4000	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	21	1573	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	22.2920950114609	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCAGACTGAATTTATT	NA	False	NA	10	True	NA	NA	NA	40904283	40933801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.14	chr3	+	3257	11	Fusion	ENSMUSG00000105517.2_ENSMUSG00000025762.17	novel	2497	10	NA	NA	21	784	multi-exon	FALSE	canonical	0	0	junction_9	34.4559138610486	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATACTACTATGGTC	NA	False	NA	NA	False	AATAAA	-15	NA	40904283	40961308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40959121_40959262_40960092
ES.21415.16	chr3	+	4551	9	ISM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	65	-1587	65	1576	intron_retention	FALSE	canonical	3	71	junction_4	8.28307762851466	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTGAATTTATTTTG	NA	False	NA	13	True	NA	NA	NA	40904327	40933804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935
ES.21415.17	chr3	+	2983	3	ISM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	97	13450	97	297	intron_retention	FALSE	canonical	3	78	junction_1	7.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTCTTTATAGATTA	NA	False	NA	NA	False	TTTAAA	-16	NA	40904359	40918767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40905120_40916042_40916102_40916603
ES.21415.18	chr3	+	1809	10	NIC	ENSMUSG00000025762.17	novel	1505	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.0348108123445	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	NA	False	NA	13	True	AATAAA	-26	NA	40905227	40932228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905386_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.19	chr3	+	3202	9	FSM	ENSMUSG00000025762.17	ENSMUST00000191872.6	1505	9	41	-1738	15	1574	multi-exon	FALSE	canonical	0	0	junction_1	38.6407734782833	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGACTGAATTTATTT	NA	False	NA	11	True	NA	NA	NA	40905267	40933802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905386_40916042_40916102_40916603_40916664_40918402_40918578_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.2	chr3	+	2570	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-58	-15	-58	4	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTAAGGGCTTTTCT	9959	False	NA	17	True	AATAAA	-30	NA	40904204	40932232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.20	chr3	+	3797	1	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	402	-1541	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAACAGGTACCATTATC	NA	False	NA	NA	False	NA	NA	NA	40926473	40930270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40926500_40930300
ES.21415.3	chr3	+	2503	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	-51	4	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	22.2920950114609	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTAAGGGCTTTTCT	9966	False	NA	17	True	AATAAA	-30	NA	40904211	40932232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.4	chr3	+	4487	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-46	-1944	-46	1933	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTCTTGTCAAGTG	9971	False	NA	3	True	NA	NA	NA	40904216	40934161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.5	chr3	+	2374	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-46	169	-46	-16	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGTAGCATTTCCAAAA	9971	False	NA	31	True	AATAAA	-16	NA	40904216	40932048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.6	chr3	+	2367	11	NNC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.6015037168954	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTGTTTTTAAGGGC	9975	False	NA	11	True	AATAAA	-24	NA	40904220	40932226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_40904445_40904625_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.7	chr3	+	4996	9	ISM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	-23	-1944	-23	1933	intron_retention	FALSE	canonical	3	71	junction_4	8.28307762851466	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTCTTGTCAAGTG	9994	False	NA	3	True	NA	NA	NA	40904239	40934161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935
ES.21415.8	chr3	+	2868	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	2	-373	2	362	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATAACCTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	40904264	40932590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21415.9	chr3	+	4379	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	2	1933	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	22.2920950114609	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTCTTGTCAAGTG	NA	False	NA	3	True	NA	NA	NA	40904264	40934161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ES.21416.1	chr3	-	1877	1	Intergenic	novelGene_17733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40911353	40909476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_40909500_40911400
ES.21417.1	chr3	-	2512	1	Antisense	novelGene_ENSMUSG00000025762.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAACCAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	40916461	40913949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_40913900_40916500
ES.21418.1	chr3	+	10283	1	Antisense	novelGene_ENSMUSG00000049940.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAGAGCAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	41019376	41029659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_41019400_41029700
ES.21419.1	chr3	-	2986	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	21	0	21	0	multi-exon	FALSE	canonical	3	569	junction_2	17	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTACATTTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	41037460	41020760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41023160_41024714_41024871_41037029
ES.21419.2	chr3	-	2546	4	NNC	ENSMUSG00000049940.8	novel	3007	3	NA	NA	39	-342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	276.591556069394	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGTCTCATTGTTA	NA	False	NA	4	True	AATAAA	-29	NA	41037442	41021102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41021864_41021943_41023160_41024714_41024871_41037029
ES.21419.3	chr3	-	2633	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	26	348	26	-348	multi-exon	FALSE	canonical	3	569	junction_2	17	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCAGTCAAATGTCTCA	NA	False	NA	-2	True	AATAAA	-23	NA	41037455	41021108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41023160_41024714_41024871_41037029
ES.21419.4	chr3	-	2659	1	NIC	ENSMUSG00000049940.8	novel	3007	3	NA	NA	1199	-487	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCATTGAGCCTAATAA	NA	False	NA	NA	False	AGTAAA	-11	NA	41023906	41021247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41021200_41023900
ES.21419.5	chr3	-	2004	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	-158	1161	-158	1033	multi-exon	FALSE	canonical	3	569	junction_2	17	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCGGACTCTAAATACAG	NA	False	NA	NA	False	AATAAA	-27	NA	41037639	41021921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41023160_41024714_41024871_41037029
ES.21419.6	chr3	-	3503	2	FSM	ENSMUSG00000049940.8	ENSMUST00000124636.2	596	2	-1884	-1023	-1884	1023	multi-exon	FALSE	canonical	3	603	junction_1	0	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCTCGAGTCGGACT	NA	False	NA	NA	False	AATAAA	-17	NA	41026989	41021931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41023160_41024714
ES.21419.7	chr3	-	4687	1	NIC	ENSMUSG00000049940.8	novel	3007	3	NA	NA	39	-9801	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	41037442	41032755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41032800_41037400
ES.2142.1	chr1	+	4427	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	-9	0	-9	0	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGCAGATGCTTTATT	NA	False	NA	88	True	TATAAA	-19	NA	184936304	185016382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.10	chr1	+	4242	36	NNC	ENSMUSG00000039318.13	novel	7052	35	NA	NA	3	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.4006356558218	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGCAATCCTGTC	NA	False	NA	8	True	AATAAA	-14	NA	184936316	185016302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_184936339_184936474_184936551_184954041_184954107_184965157_184965282_184966317_184966383_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.11	chr1	+	4374	35	NNC	ENSMUSG00000039318.13	novel	7052	35	NA	NA	14	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.4246169574753	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAATCCTGTCTAAATT	NA	False	NA	14	True	AATAAA	-20	NA	184936327	185016308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984562_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.13	chr1	+	4998	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	22	2032	22	4	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTCAACTTTATT	NA	False	NA	NA	False	AAAAAG	-21	NA	184936335	185016924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.14	chr1	+	4457	36	NNC	ENSMUSG00000039318.13	novel	7052	35	NA	NA	24	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	24.3933078812152	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCAATCCTGTCTAAAT	NA	False	NA	13	True	AATAAA	-19	NA	184936337	185016307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185012494_185012573_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.15	chr1	+	6648	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	24	-2254	24	-305	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCATACCCGTAGGAAC	NA	False	NA	15	True	AATAAA	-26	NA	184936337	185018636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.18	chr1	+	1924	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	184944114	184946038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_184944100_184946000
ES.2142.19	chr1	+	3330	24	ISM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	43807	2649	-15755	-75	3prime_fragment	FALSE	canonical	3	69	junction_17	13.1245307774619	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCAATCCTGTCTAAAT	NA	False	NA	13	True	AATAAA	-19	NA	184980120	185016307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.2	chr1	+	6732	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	-9	329	-9	-314	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCCACTGTTCATACC	NA	False	NA	6	True	AATAAA	-17	NA	184936304	185018627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.20	chr1	+	1624	12	NNC	ENSMUSG00000039318.13	novel	614	2	NA	NA	1643	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.1268362081583	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCAATCCTGTCTA	NA	False	NA	10	True	AATAAA	-16	NA	184997681	185016304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_184997834_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.21	chr1	+	3514	9	ISM	ENSMUSG00000039318.13	ENSMUST00000195042.6	1981	12	7753	316	-6366	-316	internal_fragment	FALSE	canonical	3	69	junction_2	8.85208308817761	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCTCCACTGTTCATA	NA	False	NA	4	True	AATAAA	-15	NA	185003628	185018625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.22	chr1	+	5722	4	NNC	ENSMUSG00000039318.13	novel	3245	11	NA	NA	-687	-78	intron_retention	TRUE	non_canonical	0	0	junction_2	43.9267066322477	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCAATCCTGTCTA	NA	False	NA	10	True	AATAAA	-16	NA	185009307	185016304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185009419_185010344_185011239_185011281_185015738_185016043
ES.2142.23	chr1	+	3498	3	NIC	ENSMUSG00000039318.13	novel	3245	11	NA	NA	1635	-78	intron_retention	FALSE	canonical	3	86	junction_2	0.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCAATCCTGTCTA	NA	False	NA	10	True	AATAAA	-16	NA	185011629	185016304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185014708_185015578_185015738_185016043
ES.2142.3	chr1	+	4991	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	-9	-564	-9	26	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCAAGTGTTCAAAACT	NA	False	NA	NA	False	AAAAAG	-43	NA	184936304	185016946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.4	chr1	+	7050	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	-1	3	-1	-3	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATTCAGTGTCTGTCTC	NA	False	NA	NA	False	AATAAA	-31	NA	184936312	185018953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.5	chr1	+	4319	34	NIC	ENSMUSG00000039318.13	novel	7052	35	NA	NA	0	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	19.6965967330657	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGTCTAAATTCCCCA	NA	False	NA	19	True	AATAAA	-25	NA	184936313	185016313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185014494_185014708_185015578_185015738_185016043
ES.2142.6	chr1	+	4476	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	0	2576	0	-2	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAATGCAGATGCTTTA	NA	False	NA	86	True	TATAAA	-17	NA	184936313	185016380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.2142.9	chr1	+	6993	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	1	-2576	1	2	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTCTGTCTCTGAAG	NA	False	NA	NA	False	AATAAA	-36	NA	184936314	185018958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ES.21420.1	chr3	+	178	1	Intergenic	novelGene_17734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	41170081	41170259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_41170100_41170300
ES.21421.1	chr3	+	130	1	Intergenic	novelGene_17741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	41420256	41420386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_41420300_41420400
ES.21422.1	chr3	-	3989	10	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-14	88239	multi-exon	FALSE	non_canonical	0	0	junction_1	25.1970015852857	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATTGGCTCGCTTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	41447641	41343772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41344001_41348528_41348605_41379081_41379268_41379371_41379597_41381117_41381180_41429734_41429830_41430066_41432596_41436231_41436380_41436506_41436880_41447574
ES.21422.10	chr3	-	3952	6	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-3	16435	multi-exon	FALSE	canonical	1	1	junction_1	28.6146815463671	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTTTGACACATTGA	NA	False	NA	-13	True	ATTAAA	-14	NA	41447630	41415576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41416328_41429734_41429830_41430066_41432596_41436231_41436380_41436506_41436880_41447574
ES.21422.11	chr3	-	2841	1	Intergenic	novelGene_17740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCCTGGTCATGGTG	503	False	NA	NA	False	NA	NA	NA	41422962	41420121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41420100_41423000
ES.21422.12	chr3	-	5852	1	Intergenic	novelGene_17742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAGATAGAAA	NA	False	NA	NA	False	NA	NA	NA	41427229	41421377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41421400_41427200
ES.21422.13	chr3	-	3788	1	Intergenic	novelGene_17743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTGGACTGGTGCT	NA	False	NA	NA	False	AATAAA	-11	NA	41427979	41424191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41424200_41428000
ES.21422.14	chr3	-	1235	7	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	1	7050	multi-exon	FALSE	canonical	1	1	junction_1	27.8248490062789	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGACTTAGAATGCATGG	NA	False	NA	NA	False	AATAAA	-24	NA	41447624	41424961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41425106_41429734_41429830_41430066_41430172_41436231_41436380_41436506_41436880_41437302_41437571_41447522
ES.21422.15	chr3	-	5324	2	FSM	ENSMUSG00000105260.2	ENSMUST00000196123.2	504	2	-637	-4183	-637	-1	multi-exon	FALSE	canonical	3	82	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAAGCTCTCCTTCGTG	NA	False	NA	-11	True	AGTAAA	-15	NA	41437463	41432012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41436380_41436506
ES.21422.16	chr3	-	1221	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-14	-3	multi-exon	FALSE	canonical	3	17	junction_1	26.5455583227527	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCAAGCTCTCCTTCG	NA	False	NA	-13	True	AGTAAA	-13	NA	41447641	41432014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41432596_41436231_41436380_41436506_41436880_41447522
ES.21422.17	chr3	-	804	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-19	-5	multi-exon	FALSE	canonical	3	25	junction_3	23.3666428910958	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGCAAGCTCTCCTT	NA	False	NA	-15	True	AGTAAA	-11	NA	41447646	41432016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41447574
ES.21422.18	chr3	-	1037	5	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-8	-6	multi-exon	FALSE	canonical	0	0	junction_4	33.9806930476705	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGCAAGCTCTCCT	NA	False	NA	-16	True	AGTAAA	-10	NA	41447635	41432017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41440150_41440396_41447574
ES.21422.19	chr3	-	864	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-28	-6	multi-exon	FALSE	canonical	3	51	junction_3	13.2748718344933	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGCAAGCTCTCCT	NA	False	NA	-16	True	AGTAAA	-10	NA	41447655	41432017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41432228_41436231_41436380_41436506_41436880_41447522
ES.21422.2	chr3	-	3478	5	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-14	66504	multi-exon	FALSE	canonical	0	0	junction_1	31.5792653492763	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATAATGGTTTATGTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	41447641	41365507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41365817_41430066_41432596_41436231_41436380_41436506_41436880_41447522
ES.21422.20	chr3	-	1469	5	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	1	-6	multi-exon	FALSE	canonical	2	6	junction_4	30.8463936303744	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGCAAGCTCTCCT	NA	False	NA	-16	True	AGTAAA	-10	NA	41447624	41432017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41432596_41436231_41436380_41436506_41436880_41437302_41437571_41447522
ES.21422.21	chr3	-	4145	3	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-47	-748	multi-exon	FALSE	canonical	3	51	junction_2	15.5	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCCTGTTTTCTCCATC	NA	False	NA	NA	False	AGTAAA	-19	NA	41447674	41432759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41436380_41436506_41436880_41447522
ES.21422.22	chr3	-	2651	3	NNC	ENSMUSG00000097639.3	novel	497	2	NA	NA	-6	709	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGATTTTCTTCTCAG	NA	False	NA	NA	False	GATAAA	-15	NA	41447633	41437749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41438528_41438581_41440396_41447574
ES.21422.23	chr3	-	4383	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	-2	-2220	0	-1435	multi-exon	FALSE	canonical	3	87	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTTAACTGTGCCGT	NA	False	NA	NA	False	TTTAAA	-8	NA	41447627	41439893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41444172_41447522
ES.21422.24	chr3	-	2982	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-1718	-1437	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGACTCTTAACTGTGCC	NA	False	NA	NA	False	TTTAAA	-6	NA	41444629	41439895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41440396_41442147
ES.21422.25	chr3	-	618	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	-14	-1438	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGGACTCTTAACTGTGC	NA	False	NA	NA	False	TTTAAA	-5	NA	41447641	41439896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41440396_41447522
ES.21422.26	chr3	-	4324	2	FSM	ENSMUSG00000097639.3	ENSMUST00000181833.2	986	2	3	-3341	1	-1439	multi-exon	FALSE	canonical	2	4	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41447624	41439897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41444172_41447574
ES.21422.27	chr3	-	4831	4	Fusion	ENSMUSG00000097639.3_ENSMUSG00000106223.2	novel	643	3	NA	NA	1	-1439	multi-exon	FALSE	canonical	0	0	junction_1	50.2792203599061	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGGACTCTTAACTGTG	NA	False	NA	NA	False	TTTAAA	-4	NA	41482878	41439897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41444172_41476693_41476891_41477364_41477680_41482833
ES.21422.28	chr3	-	735	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	0	35778	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACCCTAGGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	41482879	41439903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41440396_41476693_41476891_41482833
ES.21422.29	chr3	-	3372	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	1	-1212	1	1212	multi-exon	FALSE	canonical	3	87	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAGAAAAATATGGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	41447624	41440901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41444172_41447522
ES.21422.3	chr3	-	791	1	Intergenic	novelGene_17735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACCAAGATAATGGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	41366305	41365514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41365500_41366300
ES.21422.30	chr3	-	2975	5	Fusion	ENSMUSG00000097639.3_ENSMUSG00000106223.2	novel	643	3	NA	NA	-13	3	multi-exon	FALSE	canonical	0	0	junction_1	33.4841380357924	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	41482922	41442110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41444172_41455376_41455873_41464877_41465010_41476693_41476891_41482833
ES.21422.32	chr3	-	1127	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	-31	1065	-29	60	multi-exon	FALSE	canonical	3	87	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTTGTCAATTTTT	NA	False	NA	57	True	NA	NA	NA	41447656	41443178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41444172_41447522
ES.21422.33	chr3	-	1087	1	NIC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	7	-3293	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAAAAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	41447618	41446531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41446500_41447600
ES.21422.34	chr3	-	3547	1	Intergenic	novelGene_17744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAAGACGAGTGCCAAC	NA	False	NA	NA	False	NA	NA	NA	41454641	41451094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41451100_41454600
ES.21422.35	chr3	-	833	6	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-2	21542	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.9567102363306	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCTAGGTCATGTCTT	NA	False	NA	NA	False	NA	NA	NA	41482881	41454139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41454156_41461660_41461800_41464877_41465010_41476693_41476891_41477378_41477680_41482833
ES.21422.36	chr3	-	4205	4	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	5	14453	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	24.3903441732356	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTATACTGTTCTAGTA	NA	False	NA	NA	False	AAAAAG	-5	NA	41482874	41461228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41465010_41476693_41476891_41477378_41477565_41482833
ES.21422.37	chr3	-	8276	1	Intergenic	novelGene_17745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGGTCATGGTGTCT	NA	False	NA	2	True	NA	NA	NA	41469918	41461642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41461600_41469900
ES.21422.38	chr3	-	848	5	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	11	14035	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_1	46.618129520606	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCTTTGGTCATGGT	NA	False	NA	-2	True	NA	NA	NA	41482898	41461646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41461800_41464877_41465010_41476693_41476891_41477378_41477680_41482833
ES.21422.39	chr3	-	1020	6	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-3	14034	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_2	59.8511486940727	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTTTGGTCATGG	NA	False	NA	-3	True	NA	NA	NA	41482912	41461647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41461800_41464877_41465010_41465120_41465280_41476693_41476891_41477378_41477680_41482833
ES.21422.4	chr3	-	1069	6	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	1	66493	multi-exon	FALSE	canonical	0	0	junction_1	29.2054789380349	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAATGACCAAGATAATG	NA	False	NA	NA	False	AATAAA	-19	NA	41447624	41365518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41365817_41429734_41429830_41430066_41430172_41436231_41436380_41436506_41436880_41447574
ES.21422.40	chr3	-	615	5	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	11	14034	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_3	47.9759054109456	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTTTGGTCATGG	NA	False	NA	-3	True	NA	NA	NA	41482898	41461647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41461800_41464877_41465010_41476693_41476891_41477610_41477680_41482833
ES.21422.41	chr3	-	2032	4	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-1263	14034	at_least_one_novel_splicesite	FALSE	non_canonical	1	17	junction_1	31.1234102672999	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTTTGGTCATGG	NA	False	NA	-3	True	NA	NA	NA	41478915	41461647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41461800_41464877_41465010_41476693_41476891_41477364
ES.21422.42	chr3	-	707	4	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-11	14034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.5377029867779	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTTTGGTCATGG	NA	False	NA	-3	True	NA	NA	NA	41482890	41461647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41461800_41476693_41476891_41477378_41477680_41482833
ES.21422.43	chr3	-	9012	1	Genic_Genomic	ENSMUSG00000106223.2	novel	NA	NA	NA	NA	12	1826	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTACTATGACAGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	41482867	41473855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_41473900_41482900
ES.21422.44	chr3	-	622	3	NIC	ENSMUSG00000106223.2	novel	643	3	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	9.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTGTTTAACTATT	NA	False	NA	-2	True	AATAAA	-27	NA	41482902	41476638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41476891_41477378_41477680_41482833
ES.21422.45	chr3	-	474	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-11	-35	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	5.5	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACAAAGGAAATG	NA	False	NA	-37	True	AATGAA	-13	NA	41482890	41476673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41476891_41477364_41477565_41482833
ES.21422.46	chr3	-	452	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	-3	-35	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	22	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACAAAGGAAATG	NA	False	NA	-37	True	AATGAA	-13	NA	41482882	41476673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41476891_41477378_41477565_41482833
ES.21422.48	chr3	-	565	3	FSM	ENSMUSG00000106223.2	ENSMUST00000199633.2	643	3	42	36	12	-36	multi-exon	FALSE	canonical	3	84	junction_1	18	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAATAAACAAAGGAAAT	NA	False	NA	-38	True	AATGAA	-12	NA	41482867	41476674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41476891_41477364_41477680_41482833
ES.21422.5	chr3	-	3454	1	Intergenic	novelGene_17736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	41405966	41402512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41402500_41406000
ES.21422.6	chr3	-	3598	1	Intergenic	novelGene_17737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGATTCATATTAAGCAA	9164	False	NA	NA	False	ATTAAA	-11	NA	41414301	41410703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41410700_41414300
ES.21422.7	chr3	-	4170	1	Intergenic	novelGene_17738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTCTGAACTTTGT	7818	False	NA	NA	False	NA	NA	NA	41415647	41411477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41411500_41415600
ES.21422.8	chr3	-	3720	1	Intergenic	novelGene_17739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGCTTGAATGTTTGT	4187	False	NA	5	True	ATTAAA	-32	NA	41419278	41415558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_41415600_41419300
ES.21422.9	chr3	-	1617	7	Fusion	ENSMUSG00000097639.3_ENSMUSG00000105260.2	novel	504	2	NA	NA	-9	16435	multi-exon	FALSE	canonical	0	0	junction_1	27.4737248212825	165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTTTGACACATTGA	NA	False	NA	-13	True	ATTAAA	-14	NA	41447636	41415576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_41416493_41429734_41429830_41430066_41430172_41436231_41436380_41436506_41436683_41436764_41436880_41447574
ES.21423.1	chr3	+	5572	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	-75	-16	-75	16	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGGTAAGGTTTCTT	NA	False	NA	35	True	AATAAA	-44	NA	41510090	41571315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.10	chr3	+	5468	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	353.183023280967	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510166	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41511003_41511096_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554553_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.11	chr3	+	5438	11	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	226.907668446882	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510166	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548237_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.12	chr3	+	5395	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	42	junction_1	239.760528676242	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510166	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.14	chr3	+	5451	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	240.071322735557	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAAGTGTCTGTTGAA	NA	False	NA	11	True	AATAAA	-20	NA	41510166	41571291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554477_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.15	chr3	+	3482	10	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	150	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	359.668194140854	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGCCTGTGTATGTGT	NA	False	NA	82	True	AATAAA	-16	NA	41510166	41561280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41514950_41535629_41535708_41543368_41543458_41546117_41546276_41548237_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.16	chr3	+	6516	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	-1036	1	1036	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTTATTTCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	41510166	41572335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.18	chr3	+	2876	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	1	2604	1	202	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAATGAAGTAACTTT	NA	False	NA	NA	False	TATAAA	-8	NA	41510166	41568695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.19	chr3	+	5611	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	306.19507097209	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTAAGTGTCTGTTG	NA	False	NA	9	True	AATAAA	-18	NA	41510166	41571289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41564907_41565049_41567557
ES.21423.20	chr3	+	5566	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	305.016785881403	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510166	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41511003_41511096_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.21	chr3	+	5600	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.470945591245	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCAGTTTCCCTGGATG	NA	False	NA	NA	False	AATACA	-19	NA	41510167	41571428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546268_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.22	chr3	+	3777	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	1702	2	-950	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATAATGTTCTGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	41510167	41569597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.23	chr3	+	3324	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	10168	2	1	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTATTAACTCTTTT	NA	False	NA	3	True	AATAAA	-15	NA	41510167	41561131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.24	chr3	+	5312	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	241.963623426598	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	False	NA	10	True	AATAAA	-19	NA	41510167	41571290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.25	chr3	+	3306	9	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	267.440998165951	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTCGTCATTTTGCG	NA	False	NA	8	True	ATTAAA	-13	NA	41510167	41561206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554549_41554625_41555801_41555919_41558904
ES.21423.27	chr3	+	10284	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	683	junction_7	57.2546833493305	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510167	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41564356_41567557
ES.21423.28	chr3	+	2801	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	235.866508856175	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATTGTGAGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	41510167	41568583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543496_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.3	chr3	+	3540	9	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	-62	10016	-62	153	5prime_fragment	FALSE	canonical	3	683	junction_7	60.6727904418447	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTGTGTATGTGTGTG	NA	False	NA	85	True	AATAAA	-19	NA	41510103	41561283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.32	chr3	+	4624	6	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	313.720512558551	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTTAAGTGTCTGT	NA	False	NA	7	True	AATAAA	-16	NA	41510167	41571287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41558904_41559427_41564237_41564356_41567557
ES.21423.33	chr3	+	5334	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-183	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	305.20677180187	1107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTCTATGTAGAGATG	NA	False	NA	NA	False	AAAAAG	-30	NA	41510167	41571110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41514950_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.34	chr3	+	8675	10	ISM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	6	2	0	intron_retention	FALSE	canonical	3	683	junction_7	57.2482141615907	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510167	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237
ES.21423.35	chr3	+	5526	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305.587200631968	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTTAAGTGTCTGT	NA	False	NA	7	True	AATAAA	-16	NA	41510167	41571287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41514965_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.36	chr3	+	4632	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	357.681702076022	1103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	41510167	41570526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41514950_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41567557
ES.21423.37	chr3	+	6650	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	734	junction_5	45.1961431764337	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510167	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.38	chr3	+	5575	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	304.735788555342	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	False	NA	10	True	AATAAA	-19	NA	41510167	41571290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41556870_41556976_41558904_41559427_41564237_41564356_41567557
ES.21423.39	chr3	+	4464	4	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	369.396204035119	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCTGTTGAAATC	NA	False	NA	14	True	AATAAA	-23	NA	41510167	41571294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41558904_41559427_41564237_41564356_41567557
ES.21423.4	chr3	+	5569	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	-48	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	305.20677180187	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTCTGTTGAAATCT	NA	False	NA	15	True	AATAAA	-24	NA	41510117	41571295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41514950_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.40	chr3	+	5461	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	242.242626306767	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTAAGTGTCTGTTG	NA	False	NA	9	True	AATAAA	-18	NA	41510167	41571289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548382_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.41	chr3	+	5508	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	235.866508856175	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	False	NA	10	True	AATAAA	-19	NA	41510167	41571290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543496_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.42	chr3	+	5125	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	354	2	-348	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTATGTGTTGTGTAC	NA	False	NA	NA	False	TATAAA	-18	NA	41510167	41570945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.44	chr3	+	5017	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	2	462	2	290	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGATTATGATCAAT	NA	False	NA	NA	False	AAGAAA	-1	NA	41510167	41570837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.45	chr3	+	5309	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	379.710253408056	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510168	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41514905_41515029_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41558904_41559427_41564237_41564356_41567557
ES.21423.46	chr3	+	5530	12	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	300.880965452953	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510168	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41543757_41543817_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.47	chr3	+	6547	11	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	4	1032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	235.866508856175	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTTGTTTATTTCTC	NA	False	NA	NA	False	TTTAAA	-44	NA	41510169	41572331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41535629_41535708_41543368_41543496_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.48	chr3	+	5587	12	NNC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305.587200631968	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	False	NA	10	True	AATAAA	-19	NA	41510169	41571290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510255_41514905_41515025_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.5	chr3	+	5387	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_9	244.759039984882	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510135	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41567557
ES.21423.50	chr3	+	5811	11	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_3	235.866508856175	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41510187	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543817_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.51	chr3	+	5518	11	NNC	ENSMUSG00000025764.15	novel	774	5	NA	NA	220	-3	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	239.871632336965	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	False	NA	10	True	AATAAA	-19	NA	41510414	41571290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41510550_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.52	chr3	+	5580	11	FSM	ENSMUSG00000025764.15	ENSMUST00000163764.8	5584	11	4	0	4	0	multi-exon	FALSE	canonical	2	12	junction_1	237.242260147723	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41517807	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41518002_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.53	chr3	+	3388	9	ISM	ENSMUSG00000025764.15	ENSMUST00000163764.8	5584	11	40	10169	-2	-6	5prime_fragment	FALSE	canonical	2	12	junction_1	261.553412327196	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTGGGTGTATTAA	NA	False	NA	-4	True	AATAAA	-8	NA	41517843	41561124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41518002_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.54	chr3	+	5466	11	NIC	ENSMUSG00000025764.15	novel	5584	11	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	303.192694503017	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41517884	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41518002_41535629_41535708_41543368_41543458_41546117_41546276_41548237_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.55	chr3	+	3707	9	ISM	ENSMUSG00000025764.15	ENSMUST00000170711.8	2896	11	-10	7212	-10	151	5prime_fragment	FALSE	canonical	0	0	junction_1	265.416064886811	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGCCTGTGTATGTGTG	NA	False	NA	83	True	AATAAA	-17	NA	41518031	41561281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41518352_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.56	chr3	+	5525	11	FSM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	11	-746	11	0	multi-exon	FALSE	canonical	3	17	junction_1	235.78218762239	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41519299	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41519439_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.57	chr3	+	5502	11	NIC	ENSMUSG00000025764.15	novel	4790	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	239.579402286591	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41519328	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41519446_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.58	chr3	+	3491	9	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	43	9269	-1	148	5prime_fragment	FALSE	canonical	3	17	junction_1	259.944916039918	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAGTGCCTGTGTATGT	NA	False	NA	80	True	AATAAA	-14	NA	41519331	41561278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41519439_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.59	chr3	+	5785	11	NNC	ENSMUSG00000025764.15	novel	3327	9	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	239.871632336965	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41519438	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41519838_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.6	chr3	+	5214	9	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	-29	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	267.935043434038	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTTTAAGTGTCTGTT	NA	False	NA	8	True	AATAAA	-17	NA	41510136	41571288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41558904_41559427_41564237_41564356_41567557
ES.21423.60	chr3	+	5411	10	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	16314	-744	312	-2	3prime_fragment	FALSE	canonical	3	683	junction_6	57.1381259064275	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAAGTGTCTGTTGAA	NA	False	NA	11	True	AATAAA	-20	NA	41535602	41571291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.61	chr3	+	3347	8	NNC	ENSMUSG00000025764.15	novel	774	5	NA	NA	1420	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.440681392824	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGTCATTTTGCGTTTAA	NA	False	NA	13	True	ATTAAA	-18	NA	41536710	41561211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41536819_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ES.21423.62	chr3	+	7591	9	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	21796	-745	-5023	-1	3prime_fragment	FALSE	canonical	3	683	junction_5	60.5123954244087	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	1843	False	NA	12	True	AATAAA	-21	NA	41541084	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.63	chr3	+	5061	7	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	28909	-742	-10	-4	3prime_fragment	FALSE	canonical	3	683	junction_3	39.432079439067	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTAAGTGTCTGTTG	8956	False	NA	9	True	AATAAA	-18	NA	41548197	41571289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.64	chr3	+	6589	6	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	30044	-745	1125	-1	3prime_fragment	FALSE	canonical	3	683	junction_2	42.0314168212303	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGTGTCTGTTGAAA	NA	False	NA	12	True	AATAAA	-21	NA	41549332	41571292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.65	chr3	+	8763	5	NIC	ENSMUSG00000025764.15	novel	5584	11	NA	NA	-747	0	intron_retention	FALSE	canonical	3	683	junction_1	46.2979481186802	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41550354	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.66	chr3	+	5997	3	NIC	ENSMUSG00000025764.15	novel	774	5	NA	NA	19	150	intron_retention	FALSE	canonical	3	683	junction_1	57.5	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGCCTGTGTATGTGT	NA	False	NA	82	True	AATAAA	-16	NA	41551120	41561280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41554625_41555801_41555919_41558904
ES.21423.67	chr3	+	4379	3	ISM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	39613	-746	2037	0	3prime_fragment	FALSE	canonical	3	776	junction_1	7.5	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	3167	False	NA	13	True	AATAAA	-22	NA	41558901	41571293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_41559427_41564237_41564356_41567557
ES.21423.68	chr3	+	8925	1	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	4775	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1042	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAAAAAATTTCCCC	950	False	NA	NA	False	NA	NA	NA	41561639	41570564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41561600_41570600
ES.21423.69	chr3	+	1645	1	Intergenic	novelGene_17746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTTTTTTTCGTTTT	7139	False	NA	NA	False	AATAGA	-20	NA	41572141	41573786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_41572100_41573800
ES.21423.7	chr3	+	4820	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	-27	688	-27	64	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACACGTTTAATTACTG	NA	False	NA	NA	False	NA	NA	NA	41510138	41570611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21423.8	chr3	+	3592	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	-8	1897	-8	909	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATAGGTTATATTTTA	NA	False	NA	NA	False	AAAAAG	-12	NA	41510157	41569402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ES.21424.1	chr3	-	3944	1	Genic_Genomic	ENSMUSG00000103843.2	novel	NA	NA	NA	NA	-935	1589	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTAACAGTTGATGATT	3523	False	NA	NA	False	AAGAAA	-24	NA	41519068	41515124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_41515100_41519100
ES.21425.1	chr3	+	235	1	Intergenic	novelGene_17747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAAATTACTTTCAAG	NA	False	NA	NA	False	ATTAAA	-25	NA	41578532	41578767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_41578500_41578800
ES.21426.1	chr3	-	3026	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-18	-3	-18	3	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCATGTATTTGAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	41696967	41581151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21426.10	chr3	-	2683	21	NNC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	11.238327277669	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTGCCTTCATCAAT	NA	False	NA	NA	False	AATAAA	-14	NA	41696966	41581378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41601962_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21426.11	chr3	-	2108	17	ISM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-10	30504	-10	2	5prime_fragment	FALSE	canonical	3	23	junction_13	7.22598392954205	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	41696959	41611658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21426.2	chr3	-	3063	21	NNC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	11.8248678639552	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	41696966	41581154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696388
ES.21426.3	chr3	-	2842	18	NNC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	15.3395253532267	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	41696933	41581154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41688602_41688671_41696388
ES.21426.4	chr3	-	2866	19	NIC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	14.9175718740445	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	41696937	41581154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41663903_41663970_41665517_41665641_41672163_41672300_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21426.5	chr3	-	2737	17	NIC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	12.329936891566	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	41696937	41581154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41696429
ES.21426.6	chr3	-	3031	21	NNC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.8262420066562	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTTGTCATGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	41696967	41581158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616165_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21426.7	chr3	-	2950	21	NNC	ENSMUSG00000059834.13	novel	3005	21	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.3704558034879	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTTGTCATGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	41696831	41581158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_41581670_41583952_41584049_41586087_41586167_41601853_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696388
ES.21426.9	chr3	-	2794	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	-11	222	-11	0	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTCATCAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	41696960	41581376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ES.21427.1	chr3	+	9256	4	FSM	ENSMUSG00000025766.15	ENSMUST00000192799.2	861	4	-5967	-2428	-1	4	multi-exon	FALSE	canonical	3	36	junction_1	3.39934634239519	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATTTTGTGCTGTG	NA	False	NA	7	True	ATTAAA	-17	NA	41697050	41713369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.10	chr3	+	1145	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	48	2381	3	52	multi-exon	FALSE	canonical	3	22	junction_1	8.72576007513895	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATAAACGGGTCATGCA	NA	False	NA	NA	False	AATAAA	-15	NA	41697100	41710993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.11	chr3	+	3595	7	NIC	ENSMUSG00000025766.15	novel	3574	7	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_1	15.4101337509517	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	False	NA	5	True	ATTAAA	-15	NA	41697101	41713367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41697202_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.2	chr3	+	3433	6	NNC	ENSMUSG00000025766.15	novel	3452	6	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_4	17.111399708966	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTCTCATATTTTGTG	NA	False	NA	2	True	ATTAAA	-12	NA	41697057	41713364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708067_41708158_41708359_41710483
ES.21427.3	chr3	+	3356	6	FSM	ENSMUSG00000025766.15	ENSMUST00000120167.8	773	6	18	-2601	11	2	multi-exon	TRUE	canonical	0	0	junction_5	14.2211110677049	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	False	NA	5	True	ATTAAA	-15	NA	41697063	41713367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41710483
ES.21427.4	chr3	+	3546	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	26	2	-10	-2	multi-exon	FALSE	canonical	3	22	junction_1	8.72576007513895	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTTTGTGCTGTGTTT	NA	False	NA	10	True	ATTAAA	-20	NA	41697078	41713372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.5	chr3	+	3413	6	FSM	ENSMUSG00000025766.15	ENSMUST00000108065.9	3452	6	41	-2	1	2	multi-exon	FALSE	canonical	3	14	junction_1	11.0199818511647	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	False	NA	5	True	ATTAAA	-15	NA	41697089	41713367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.6	chr3	+	1035	8	NIC	ENSMUSG00000025766.15	novel	4129	8	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	11.8648855959121	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	False	NA	5	True	ATTAAA	-15	NA	41697090	41713367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483_41710565_41713058
ES.21427.8	chr3	+	4830	5	FSM	ENSMUSG00000025766.15	ENSMUST00000195882.6	680	5	-3829	-321	0	0	multi-exon	FALSE	canonical	3	36	junction_2	2.9474565306379	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTTTTGAAGTGTCA	NA	False	NA	NA	False	GATAAA	-44	NA	41697090	41710927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ES.21427.9	chr3	+	3504	6	NNC	ENSMUSG00000025766.15	novel	3574	7	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_4	17.7943811356282	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATATTTTGTGCTGTG	NA	False	NA	7	True	ATTAAA	-17	NA	41697090	41713369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_41697125_41699130_41699273_41700982_41701164_41703107_41703169_41708158_41708359_41710483
ES.21428.1	chr3	+	217	1	Intergenic	novelGene_17748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTGTGTCTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43268348	43268565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_43268300_43268600
ES.21429.1	chr3	-	201	1	Intergenic	novelGene_17749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTACAGTTTAGC	NA	False	NA	NA	False	AAAAAG	-6	NA	45126709	45126508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_45126500_45126700
ES.2143.1	chr1	+	2492	10	NNC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	-3170	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.1580767546237	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185061175	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185061546_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ES.2143.10	chr1	+	2008	9	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	93.7115754589581	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185064376	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185086153_185086260_185088674
ES.2143.11	chr1	+	2264	10	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	91.6710436665449	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185064376	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185064519_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ES.2143.12	chr1	+	1166	6	ISM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	11	7342	3	2735	5prime_fragment	FALSE	canonical	3	239	junction_2	16.3633737352662	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGGAAGTTGATGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	185064379	185081636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940
ES.2143.14	chr1	+	1247	4	ISM	ENSMUSG00000026617.17	ENSMUST00000137757.2	432	5	-23	455	4	-455	5prime_fragment	FALSE	canonical	3	239	junction_2	18.4089350286454	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	185064380	185078446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511
ES.2143.15	chr1	+	2215	9	NIC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	89.8244816294533	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185064380	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185064519_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ES.2143.17	chr1	+	3405	1	NIC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	10672	-421	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAAAACTCCGCAGG	NA	False	NA	NA	False	NA	NA	NA	185075075	185078480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185075100_185078500
ES.2143.18	chr1	+	1847	6	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	13164	8	13106	-8	3prime_fragment	FALSE	canonical	3	151	junction_3	46.1969695975829	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185077509	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ES.2143.19	chr1	+	7355	2	NIC	ENSMUSG00000026617.17	novel	1046	8	NA	NA	15796	-5	intron_retention	FALSE	canonical	3	249	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	185080199	185089969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185086260_185088674
ES.2143.20	chr1	+	7854	1	NIC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	17709	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185082112	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185082100_185090000
ES.2143.3	chr1	+	4523	10	FSM	ENSMUSG00000102526.2_ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	-2306	-991	415	-5	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	185062062	185089969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ES.2143.4	chr1	+	2069	8	FSM	ENSMUSG00000026617.17	ENSMUST00000110965.2	1046	8	-30	-993	1	-3	multi-exon	FALSE	canonical	3	19	junction_1	90.255872102482	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTAATTGCCTTTATTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	185064346	185089971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ES.2143.5	chr1	+	2137	9	NNC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	91.2468321367926	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	185064349	185089966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086209_185088674
ES.2143.6	chr1	+	2189	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	8	3	8	-3	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTAATTGCCTTTATTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	185064353	185089971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ES.2143.7	chr1	+	1230	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	-4	0	-4	0	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATACGCTTAAGACTT	NA	False	NA	3	True	ATTAAA	-17	NA	185064364	185088978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ES.2143.8	chr1	+	3523	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	23	-1346	0	1346	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACATTGGGCATGTGGC	NA	False	NA	NA	False	NA	NA	NA	185064368	185091320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ES.2143.9	chr1	+	5515	8	NIC	ENSMUSG00000026617.17	novel	2200	9	NA	NA	0	-5	intron_retention	FALSE	canonical	3	6	junction_4	90.890380263754	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTAATTGCCTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	185064376	185089969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077625_185078871_185078921_185080940_185084577_185086153_185086260_185088674
ES.21430.1	chr3	+	4854	2	Antisense	novelGene_ENSMUSG00000097040.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTCGTTTCATCGTCA	NA	False	NA	NA	False	AGTAAA	-16	NA	45233536	45238430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_45233594_45233633
ES.21431.1	chr3	+	2987	1	Intergenic	novelGene_17750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACTAGTTATCCAGTT	NA	False	NA	NA	False	NA	NA	NA	45261359	45264346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_45261400_45264300
ES.21432.1	chr3	+	2855	1	Antisense	novelGene_ENSMUSG00000090919.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAAGATTCTTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	46397249	46400104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_46397200_46400100
ES.21433.1	chr3	-	6553	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	1	-1336	1	1336	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGACTTTGTTTCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	46402375	46395295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.10	chr3	-	2350	3	FSM	ENSMUSG00000090919.7	ENSMUST00000195537.2	467	3	-31	-1852	-10	1488	multi-exon	FALSE	canonical	0	0	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTGCCTTATTTTTCT	NA	False	NA	NA	False	TATAAA	-22	NA	46402386	46399638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46401939_46402069_46402251
ES.21433.2	chr3	-	4781	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-22	459	-22	-459	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTAACGTGTAGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	46402398	46397090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.3	chr3	-	5134	1	NIC	ENSMUSG00000090919.7	novel	5218	2	NA	NA	2	-609	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGATATGTCTGCGTTA	NA	False	NA	NA	False	ACTAAA	-19	NA	46402374	46397240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_46397200_46402400
ES.21433.4	chr3	-	4611	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-7	614	-7	-614	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGATGGATATGTCTG	NA	False	NA	NA	False	ACTAAA	-14	NA	46402383	46397245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.5	chr3	-	4923	2	NIC	ENSMUSG00000090919.7	novel	467	3	NA	NA	4	-614	intron_retention	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGATGGATATGTCTG	NA	False	NA	NA	False	ACTAAA	-14	NA	46402351	46397245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_46402069_46402251
ES.21433.6	chr3	-	4433	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-27	812	-27	-812	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCAGCCAGTATCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	46402403	46397443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.7	chr3	-	3824	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	-10	1404	-10	-1404	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCATTAAGCAGCACATG	NA	False	NA	NA	False	AATAAA	-24	NA	46402386	46398035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.8	chr3	-	2278	2	FSM	ENSMUSG00000090919.7	ENSMUST00000195436.2	723	2	-9	-1546	-9	1546	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGACTGTGTTGCGTTT	NA	False	NA	NA	False	NA	NA	NA	46402385	46399580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_46401725_46402251
ES.21433.9	chr3	-	2461	3	NNC	ENSMUSG00000090919.7	novel	467	3	NA	NA	1	1507	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTCCACCTCCTTTTA	NA	False	NA	NA	False	TATAAA	-41	NA	46402375	46399619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_46401828_46401939_46402069_46402251
ES.21434.1	chr3	-	320	1	Intergenic	novelGene_17751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAACAAACATACCCT	NA	False	NA	NA	False	ATTAAA	-39	NA	47701070	47700750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_47700800_47701100
ES.21435.1	chr3	-	582	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	11	0	11	0	multi-exon	FALSE	canonical	3	53	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	0	True	AATAAA	-42	NA	48563526	48560166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_48560355_48563132
ES.21436.1	chr3	-	4277	4	Intergenic	novelGene_17753	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTATGATTGTG	NA	False	NA	NA	False	CATAAA	-15	NA	49016644	48919567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_48923381_48924843_48925104_49005401_49005455_49016493
ES.21436.2	chr3	-	4409	5	Intergenic	novelGene_17752	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTATGATTGTG	NA	False	NA	NA	False	CATAAA	-15	NA	49016630	48919567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_48923381_48923862_48924009_48924843_48925104_49005401_49005455_49016493
ES.21437.1	chr3	+	3185	1	FSM	ENSMUSG00000104186.2	ENSMUST00000194626.2	1065	1	-2113	-7	-2113	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCTTGGTCTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	49089798	49092983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_49089800_49093000
ES.21438.1	chr3	-	179	1	Intergenic	novelGene_17754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAATATATT	NA	False	NA	NA	False	NA	NA	NA	49102309	49102130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_49102100_49102300
ES.21439.1	chr3	+	180	1	Intergenic	novelGene_17755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACCTGTG	NA	False	NA	NA	False	NA	NA	NA	49395637	49395817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_49395600_49395800
ES.2144.1	chr1	+	4288	26	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-91	-5	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	605.755110915294	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095149	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.10	chr1	+	4971	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	566.923271561213	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095241	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139464_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.100	chr1	+	2919	19	NIC	ENSMUSG00000026615.15	novel	5638	20	NA	NA	7	-2571	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	600.333716350876	2897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAAAGCAGAACAAGCC	NA	False	NA	NA	False	NA	NA	NA	185095261	185139825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.101	chr1	+	3809	24	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	7	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	629.89298157859	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095261	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.107	chr1	+	4865	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	713.056049887354	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATTTTATCTATTTGG	NA	False	NA	11	True	AATAAA	-13	NA	185095263	185160546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118527_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148143_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.108	chr1	+	4749	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_22	552.866040192774	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095264	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143391_185143516_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.109	chr1	+	4947	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	710.698105298586	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095264	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185114445_185114521_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.110	chr1	+	4668	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	574.509975737778	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095266	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185117108_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.111	chr1	+	4878	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	14	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	567.563848535486	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095268	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126684_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.114	chr1	+	3915	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	30	1693	16	-1693	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	2908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTTAGAGACACGT	NA	False	NA	NA	False	AATAAA	-18	NA	185095270	185140703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.118	chr1	+	4834	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	567.525946818447	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095280	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095429_185099741_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.119	chr1	+	4876	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	26	30800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	558.642607129102	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCGACTCAGTATTGGG	NA	False	NA	NA	False	AATGAA	-30	NA	185095280	185191357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193_185160550_185191339
ES.2144.121	chr1	+	4786	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	27	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	567.525946818447	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095281	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095374_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.123	chr1	+	4854	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	562.640961179214	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095281	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145426_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.127	chr1	+	4825	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	28	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	567.520724866472	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095282	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117279_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.128	chr1	+	4848	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	563.986942749645	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095282	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105252_185106321_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.129	chr1	+	4773	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	28	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	575.960327530368	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095282	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.13	chr1	+	3066	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	1	2571	1	-2571	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	2897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAAAGCAGAACAAGCC	NA	False	NA	NA	False	NA	NA	NA	185095241	185139825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.132	chr1	+	4819	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	29	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	564.069004494508	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095283	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106378_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.133	chr1	+	4829	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	29	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	567.382327461024	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095283	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095416_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.134	chr1	+	3296	8	ISM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	43	28220	29	148	intron_retention	FALSE	canonical	3	2037	junction_4	257.933229771598	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTGCCATGTTGGGC	NA	False	NA	NA	False	AATAAA	-14	NA	185095283	185114176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741
ES.2144.135	chr1	+	4791	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	29	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	836.125487845932	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095283	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185127578_185127644_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.137	chr1	+	4864	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	560.065647631247	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095283	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143979_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.138	chr1	+	4489	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	29	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	567.210078959513	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095283	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139212_185139868_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.14	chr1	+	4269	27	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	594.248584497695	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095241	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142438_185147959_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.140	chr1	+	4830	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	31	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	557.712652452421	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095285	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156569_185160048_185160114_185160193
ES.2144.143	chr1	+	4848	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	712.628411489187	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095285	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139390_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148152_185150415_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.144	chr1	+	1008	5	ISM	ENSMUSG00000026615.15	ENSMUST00000193788.6	3034	7	-41	3534	33	0	5prime_fragment	FALSE	canonical	3	2037	junction_4	274.228918970994	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	185095287	185105627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114
ES.2144.146	chr1	+	4841	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	34	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	566.925459462608	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095288	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099805_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.147	chr1	+	4771	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	35	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	568.76563128703	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095289	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.148	chr1	+	968	6	ISM	ENSMUSG00000026615.15	ENSMUST00000193788.6	3034	7	-39	2512	35	2	5prime_fragment	FALSE	canonical	3	2037	junction_4	274.301002550118	2636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTGGTTTTGCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	185095289	185106649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314
ES.2144.151	chr1	+	4841	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	716.034598539715	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095289	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118527_185119255_185119316_185126559_185126671_185128226_185128364_185129264_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.152	chr1	+	4908	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	35	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	708.811240740439	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTATCTATTTGGTTC	NA	False	NA	14	True	AATAAA	-16	NA	185095289	185160549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185109551_185109611_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.153	chr1	+	5684	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	35	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	565.023876725144	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095289	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185112774_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.157	chr1	+	3927	14	NIC	ENSMUSG00000026615.15	novel	5638	20	NA	NA	36	-957	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	689.044437381502	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATATTTATTTGTG	NA	False	NA	NA	False	TATAAA	-22	NA	185095290	185141439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.16	chr1	+	7331	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-5	intron_retention	FALSE	canonical	3	1945	junction_14	332.574370964183	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095241	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.162	chr1	+	4808	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-36	-6	at_least_one_novel_splicesite	FALSE	canonical	1	78	junction_20	552.441974578104	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095292	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139911_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.164	chr1	+	4841	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	567.210078959513	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095296	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139398_185139696_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.165	chr1	+	4778	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-29	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	573.848904813415	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095299	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.166	chr1	+	4826	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-29	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	567.422965749849	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095299	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130599_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.17	chr1	+	5211	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	1	426	1	-426	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGCTTATCGTCTTA	NA	False	NA	NA	False	AATAAA	-31	NA	185095241	185141970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.172	chr1	+	4805	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	713.232024600489	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095319	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117303_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160200
ES.2144.173	chr1	+	3979	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	91	1568	3	-1568	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	2908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTGAAATGTATGTCC	NA	False	NA	NA	False	TTTAAA	-5	NA	185095331	185140828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.174	chr1	+	4745	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	4	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	557.608933935778	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTATTTTATCTATT	NA	False	NA	8	True	AATAAA	-10	NA	185095332	185160543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128309_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.175	chr1	+	4831	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	721.300725587165	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095332	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118527_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146713_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.176	chr1	+	4775	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	13	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	563.605819035592	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATTGTATTTTATCTA	NA	False	NA	6	True	AATAAA	-8	NA	185095341	185160541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142395_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.177	chr1	+	4679	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	38	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	564.628692150868	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095418	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139961_185143349_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.178	chr1	+	4665	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-35	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	576.252056154442	2984	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185099751	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185099813_185101780_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.179	chr1	+	4618	30	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1979	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	585.57302443343	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATTTTATCTATTTGG	NA	False	NA	11	True	AATAAA	-13	NA	185101772	185160546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146519_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.18	chr1	+	4739	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_6	561.297172231925	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095241	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106378_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.181	chr1	+	4109	27	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	6560	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	770.801196941923	2983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185106353	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185106410_185110971_185111099_185111741_185111935_185113996_185114116_185117080_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145429_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.182	chr1	+	7821	26	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	12027	12	7474	-12	3prime_fragment	FALSE	canonical	3	1945	junction_8	322.433784830312	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185107267	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.183	chr1	+	6176	26	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	11197	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	604.914557933598	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185110990	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185149139_185149320_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.184	chr1	+	3857	25	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	12072	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	616.106113470363	2979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185111865	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145654_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.185	chr1	+	3683	24	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	14309	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	629.977966428394	2978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATTTTATCTATTTGG	NA	False	NA	11	True	AATAAA	-13	NA	185114102	185160546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185114169_185117073_185117308_185118442_185118512_185119248_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.187	chr1	+	3515	22	NNC	ENSMUSG00000026615.15	novel	5638	20	NA	NA	-13127	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	858.082654101481	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185118727	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185118751_185119255_185119496_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.188	chr1	+	3401	21	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	23923	9	-12691	-9	3prime_fragment	FALSE	canonical	3	1945	junction_3	321.876416501738	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185119163	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.189	chr1	+	3567	20	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-12600	-12	intron_retention	FALSE	canonical	0	0	junction_1	679.022158263442	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185119254	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185119496_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048
ES.2144.191	chr1	+	3253	20	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	31317	7	-5297	-7	3prime_fragment	FALSE	canonical	3	1945	junction_2	307.246569213765	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185126557	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.192	chr1	+	2012	13	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	10280	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1093.63391447453	2918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185142134	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185159387_185159451_185160048_185160114_185160193
ES.2144.193	chr1	+	3583	3	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	58180	12	21566	-12	3prime_fragment	FALSE	canonical	3	3057	junction_2	23	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185153420	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185156587_185160048_185160114_185160193
ES.2144.194	chr1	+	6561	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	-53	-3002	-53	0	multi-exon	FALSE	canonical	3	7	junction_1	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGGACTCTGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	185186991	185200959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185188627_185194883_185195124_185196273
ES.2144.195	chr1	+	3553	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	-35	-12	-35	12	multi-exon	FALSE	canonical	3	7	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTGCAAAAAATGTC	NA	False	NA	NA	False	AATAAA	-42	NA	185187009	185197969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185188627_185194883_185195124_185196273
ES.2144.196	chr1	+	2905	4	FSM	ENSMUSG00000026614.8	ENSMUST00000238677.2	5684	4	-225	3004	-35	-2	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTATTGAGAGAAGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	185187009	185197955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185187877_185188510_185188627_185194883_185195124_185196273
ES.2144.197	chr1	+	5871	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	-35	0	-35	0	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGGACTCTGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	185187009	185200959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
ES.2144.198	chr1	+	2200	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	56	3580	56	-578	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGAAAGACAGATTGC	NA	False	NA	NA	False	AATAAA	-24	NA	185187100	185197379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
ES.2144.199	chr1	+	2849	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	79	578	79	-578	multi-exon	FALSE	canonical	3	7	junction_1	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGAAAGACAGATTGC	NA	False	NA	NA	False	AATAAA	-24	NA	185187123	185197379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185188627_185194883_185195124_185196273
ES.2144.2	chr1	+	4994	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	-89	1	-89	-1	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATTTGGTTCATCCTGC	NA	False	NA	21	True	AATAAA	-23	NA	185095151	185160556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.200	chr1	+	2615	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	212	3009	22	-7	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACTGTATTGAGAGA	NA	False	NA	NA	False	AATAAA	-23	NA	185187256	185197950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
ES.2144.201	chr1	+	5519	4	FSM	ENSMUSG00000026614.8	ENSMUST00000238677.2	5684	4	165	0	165	0	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGGACTCTGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	185187399	185200959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185187877_185188510_185188627_185194883_185195124_185196273
ES.2144.202	chr1	+	2266	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	808	432	618	-432	multi-exon	FALSE	canonical	3	7	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCGGCTATGATGTGT	NA	False	NA	NA	False	NA	NA	NA	185187852	185197525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185188627_185194883_185195124_185196273
ES.2144.24	chr1	+	4890	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	567.525946818447	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095251	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095448_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.26	chr1	+	5783	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	2037	junction_4	313.576411031754	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095251	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.27	chr1	+	4870	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	567.563848535486	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095252	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126653_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.28	chr1	+	4960	31	ISM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	14	12	0	-12	intron_retention	FALSE	canonical	3	1945	junction_14	326.26333774354	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095254	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048
ES.2144.3	chr1	+	5874	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-88	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	563.605819035592	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095152	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185140841_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.32	chr1	+	4954	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	567.525946818447	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095254	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099658_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.33	chr1	+	4873	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	565.25220030352	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095254	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133859_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.35	chr1	+	4252	28	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	594.61886906766	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095254	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095297_185106321_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.36	chr1	+	4734	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	567.575288958951	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095254	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114051_185117108_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.38	chr1	+	4867	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	567.162407666565	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095254	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143580_185143930_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.39	chr1	+	3325	18	ISM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	14	7887	0	-1227	5prime_fragment	FALSE	canonical	3	1945	junction_14	234.635873385944	2859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGCTGTCCTAGAAC	NA	False	NA	NA	False	NA	NA	NA	185095254	185134509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505
ES.2144.4	chr1	+	4976	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-87	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	567.520724866472	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095153	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118453_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.46	chr1	+	4940	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	832.03242627718	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095254	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139464_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143964_185145351_185145432_185145645_185145748_185146535_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.50	chr1	+	5173	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	710.538417521134	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095255	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185097760_185097995_185099673_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.51	chr1	+	4841	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	566.925459462608	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095255	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101817_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.53	chr1	+	4924	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	826.255368269248	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095255	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185100213_185100260_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118527_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.54	chr1	+	4724	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	559.854186085466	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095255	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143516_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.56	chr1	+	4876	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_16	563.051968516922	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095255	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131427_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.57	chr1	+	5031	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-13	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_6	827.541832401843	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095255	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185109551_185109611_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126765_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.60	chr1	+	4951	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	710.861226677718	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095255	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099466_185099540_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.61	chr1	+	4806	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	565.25220030352	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095255	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133788_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.62	chr1	+	4903	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	709.557607966709	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095255	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185119553_185119575_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.64	chr1	+	4522	29	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	573.312309153162	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095255	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.67	chr1	+	4662	30	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	574.609941628089	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATCTATTTGGTTCA	NA	False	NA	15	True	AATAAA	-17	NA	185095255	185160550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.69	chr1	+	5063	19	NIC	ENSMUSG00000026615.15	novel	5638	20	NA	NA	1	-433	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	600.333716350876	2914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCTATTTTGAGCTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	185095255	185141963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.71	chr1	+	4839	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	564.628692150868	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095255	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185143349_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.72	chr1	+	7253	31	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-9	intron_retention	FALSE	canonical	0	0	junction_14	722.44114639187	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095255	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128309_185129256_185129465_185130590_185130704_185131418_185131537_185133510_185133866_185139157_185139392_185139687_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.77	chr1	+	5854	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	567.563848535486	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095255	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185127644_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.79	chr1	+	4767	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	1	-13	combination_of_known_splicesites	FALSE	canonical	1	5	junction_12	573.157939257002	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTATTTTATCTATTT	NA	False	NA	9	True	AATAAA	-11	NA	185095255	185160544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.81	chr1	+	4898	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	15	725	1	-725	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	2913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAACAGGTTGGCCTTG	NA	False	NA	NA	False	AATAAA	-25	NA	185095255	185141671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.82	chr1	+	4832	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	3	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	560.065647631247	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095257	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143949_185145372_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.83	chr1	+	5664	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	838.460137815457	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095257	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106361_185110971_185111099_185111741_185112774_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131427_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.84	chr1	+	4860	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	720.839652329454	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095258	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185114012_185114169_185117073_185117308_185118442_185118526_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.85	chr1	+	4737	30	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	584.68126422626	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095258	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095431_185103035_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.87	chr1	+	4864	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	563.605819035592	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095259	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139940_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.89	chr1	+	4600	30	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	714.656708953882	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095260	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118527_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152478_185160322
ES.2144.9	chr1	+	7205	30	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	44	junction_6	568.584792158531	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	False	NA	16	True	AATAAA	-18	NA	185095239	185160551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.91	chr1	+	4750	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	6	-9	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	562.632958113507	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTATCTATTTGGTT	NA	False	NA	13	True	AATAAA	-15	NA	185095260	185160548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.93	chr1	+	4520	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	2	113	junction_17	557.258413026568	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTGGTTCATC	NA	False	NA	17	True	AATAAA	-19	NA	185095261	185160552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.94	chr1	+	5149	20	NNC	ENSMUSG00000026615.15	novel	5638	20	NA	NA	7	-443	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	593.296187119865	2914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAAAACTCCCCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	185095261	185141953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095416_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ES.2144.95	chr1	+	4826	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	564.069004494508	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTTATCTATTTGGT	NA	False	NA	12	True	AATAAA	-14	NA	185095261	185160547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106361_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.97	chr1	+	4944	33	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	709.135999799007	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095261	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185109551_185109623_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.98	chr1	+	4864	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	567.563848535486	2985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTTTATCTATTTG	NA	False	NA	10	True	AATAAA	-12	NA	185095261	185160545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126662_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ES.2144.99	chr1	+	855	7	ISM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	21	31326	7	-10	5prime_fragment	FALSE	canonical	3	2037	junction_4	266.097517630077	2658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGGAAAAGGAAGATT	NA	False	NA	NA	False	TTTAAA	-36	NA	185095261	185111070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971
ES.21440.1	chr3	-	4696	1	ISM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	73927	51	1115	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTAAGCATCATGTT	NA	False	NA	NA	False	AATAAA	-13	NA	50324133	50319437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_50319400_50324100
ES.21440.3	chr3	-	4457	13	NNC	ENSMUSG00000027737.11	novel	9223	12	NA	NA	-175	354	intron_retention	FALSE	canonical	0	0	junction_12	3.30298686376774	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAATTTTATTCTCCTT	8653	False	NA	NA	False	CATAAA	-16	NA	50398238	50323943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433_50397703_50398089
ES.21440.4	chr3	-	3090	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	235	5898	229	-987	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATTTCATCTCTTA	9066	False	NA	NA	False	ATTAAA	-15	NA	50397825	50325284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
ES.21440.5	chr3	-	3055	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	26	6142	20	-1231	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACTGCTTCGTGAAAAT	8857	False	NA	NA	False	CATAAA	-15	NA	50398034	50325528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
ES.21440.6	chr3	-	2310	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	26	6887	20	-1976	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTGGACTCTTTTCCC	8857	False	NA	NA	False	NA	NA	NA	50398034	50326273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
ES.21441.1	chr3	+	3726	2	Genic_Genomic	ENSMUSG00000103464.2	novel	1511	1	NA	NA	-2352	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	51008728	51012591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_51011380_51011516
ES.21441.2	chr3	+	3821	1	FSM	ENSMUSG00000103464.2	ENSMUST00000194318.2	1511	1	-2310	0	-2310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	51008770	51012591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51008800_51012600
ES.21442.1	chr3	+	5072	1	Intergenic	novelGene_17756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-42	NA	51061643	51066715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51061600_51066700
ES.21443.1	chr3	+	188	1	Intergenic	novelGene_17757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAGTAATTAA	NA	False	NA	NA	False	NA	NA	NA	51088299	51088487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51088300_51088500
ES.21444.1	chr3	+	2967	1	Intergenic	novelGene_17758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTAACTGCTTCTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	51103417	51106384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51103400_51106400
ES.21445.1	chr3	+	178	1	Intergenic	novelGene_17759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAAGGGTGTGTGCTCC	107	False	NA	NA	False	NA	NA	NA	51122828	51123006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51122800_51123000
ES.21446.1	chr3	+	3023	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	25	11	2	2	multi-exon	FALSE	canonical	3	120	junction_1	3.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTCTCTTTGGTCTA	9171	False	NA	16	True	AATAAA	-25	NA	51131892	51159054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51132709_51155225_51155496_51157117
ES.21446.2	chr3	+	6734	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	515	-4190	492	4190	multi-exon	FALSE	canonical	3	120	junction_1	3.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCACTAGATCTTGCTCTC	9661	False	NA	NA	False	NA	NA	NA	51132382	51163255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51132709_51155225_51155496_51157117
ES.21447.1	chr3	+	173	1	Intergenic	novelGene_17760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTTCAATAATT	NA	False	NA	NA	False	NA	NA	NA	51177266	51177439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51177300_51177400
ES.21448.1	chr3	+	1826	1	FSM	ENSMUSG00000087440.3	ENSMUST00000139771.3	1625	1	-171	-30	-171	30	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGCATATAAATAAAGTT	NA	False	NA	NA	False	AATAAA	-45	NA	51184008	51185834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51184000_51185800
ES.21448.2	chr3	+	1538	1	FSM	ENSMUSG00000087440.3	ENSMUST00000139771.3	1625	1	-37	124	-37	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATAAAAACTGAAATAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	51184142	51185680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51184100_51185700
ES.21449.1	chr3	+	4647	1	Intergenic	novelGene_17762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAGACTGGATTATAT	7935	False	NA	NA	False	NA	NA	NA	51240855	51245502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51240900_51245500
ES.21449.2	chr3	+	183	1	Intergenic	novelGene_17763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	51243626	51243809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51243600_51243800
ES.21449.3	chr3	+	286	1	Intergenic	novelGene_17764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATAAAGTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	51243630	51243916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51243600_51243900
ES.2145.1	chr1	-	4732	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGGGACGGAACC	NA	False	NA	NA	False	NA	NA	NA	184964145	184959413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_184959400_184964100
ES.21450.1	chr3	-	4581	1	Antisense	novelGene_ENSMUSG00000103313.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTACACACACTCTCTC	NA	False	NA	NA	False	AAGAAA	-1	NA	51145316	51140735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_51140700_51145300
ES.21451.1	chr3	-	3703	2	NNC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGTGATTTCTTTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	51184910	51160139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51163525_51184592
ES.21451.10	chr3	-	3762	11	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	-156	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	94.2498806365292	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248240	51162650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.11	chr3	-	3056	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	-107	-435	-46	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51185042	51162650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ES.21451.12	chr3	-	4228	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-874	-1	-855	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51248939	51162650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.13	chr3	-	2920	7	NNC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	81.9276442288492	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184899	51162650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172282_51172428_51174173_51174288_51184625
ES.21451.15	chr3	-	3207	8	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	97.7940359602146	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51184961	51162651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51184625
ES.21451.18	chr3	-	3477	11	NIC	ENSMUSG00000037174.19	novel	5919	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	92.5656523771102	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51248050	51162651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.19	chr3	-	3391	10	NNC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	87.3996073104719	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51248096	51162651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172282_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.2	chr3	-	5898	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-34	-2511	-15	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTGTGATTTCTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	51248099	51160140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.21	chr3	-	3486	10	NNC	ENSMUSG00000037174.19	novel	5919	10	NA	NA	192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.4580934282094	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51247790	51162651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233454_51247459
ES.21451.23	chr3	-	3266	6	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	21	-1	intron_retention	FALSE	canonical	3	154	junction_5	28.6244650605037	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	-8	True	AATATA	-12	NA	51184815	51162652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ES.21451.24	chr3	-	4533	9	ISM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	13197	1	-1418	-1	3prime_fragment	FALSE	canonical	3	56	junction_7	79.164287244944	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	-8	True	AATATA	-12	NA	51234868	51162652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368
ES.21451.26	chr3	-	3291	11	NNC	ENSMUSG00000037174.19	novel	5919	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.8189731982981	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	-8	True	AATATA	-12	NA	51248065	51162652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164845_51164891_51164987_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.27	chr3	-	2927	8	NNC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	100.150906544238	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	-8	True	AATATA	-12	NA	51184824	51162652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164987_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51184625
ES.21451.28	chr3	-	3209	10	NNC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	82.7863530233914	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGGTTTTGGTCTC	NA	False	NA	-8	True	AATATA	-12	NA	51248064	51162652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164987_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.3	chr3	-	5882	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	34	3	15	-3	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCATTGTGATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	51248050	51160143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.30	chr3	-	4676	6	NIC	ENSMUSG00000037174.19	novel	2611	7	NA	NA	16	-2	intron_retention	FALSE	canonical	3	154	junction_5	34.5288285350083	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTGTGGTTTTGGTCT	NA	False	NA	-9	True	AATATA	-11	NA	51184919	51162653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51174288_51184625
ES.21451.31	chr3	-	3697	12	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	98.3232987362617	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTATCTTGTGGTTTTG	NA	False	NA	-13	True	AATATA	-7	NA	51248079	51162657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.32	chr3	-	2588	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	143	-120	-8	118	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCGTCACTCGAGTCG	NA	False	NA	NA	False	NA	NA	NA	51184853	51162965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ES.21451.33	chr3	-	2658	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	-134	-10	-73	8	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGTATTGTTATAGAAT	NA	False	NA	NA	False	ATTAAA	-28	NA	51185069	51163075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ES.21451.34	chr3	-	2573	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	40	-2	-21	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCTAGCACAGTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	51184956	51163083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ES.21451.35	chr3	-	6270	6	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	29	0	intron_retention	FALSE	canonical	3	154	junction_5	35.9755472508758	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCTAGCACAGTATTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	51184906	51163083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51172428_51174173_51174288_51184625
ES.21451.36	chr3	-	3629	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	-656	2946	-656	-1	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTACCTAGCACAGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	51248740	51163086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.37	chr3	-	2982	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-64	435	-45	-1	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTACCTAGCACAGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	51248129	51163086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.38	chr3	-	3013	11	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	93.351004279547	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTACCTAGCACAGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	51248057	51163086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.39	chr3	-	2120	7	NNC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	100	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	77.1571268401191	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGTACCTAGCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	51184689	51163091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164987_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ES.21451.4	chr3	-	5399	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	57	-2942	-13	-3	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCATTGTGATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	51184878	51160143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ES.21451.40	chr3	-	2952	7	NNC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	1885	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.9607752632551	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGTACCTAGCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	51182904	51163091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51182150
ES.21451.41	chr3	-	2699	8	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	-28	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	97.7940359602146	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGTACCTAGCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	51184893	51163091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51184625
ES.21451.42	chr3	-	6236	9	ISM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	11041	454	-3574	0	3prime_fragment	FALSE	canonical	3	56	junction_7	79.164287244944	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	51237024	51163105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368
ES.21451.43	chr3	-	2802	8	NIC	ENSMUSG00000037174.19	novel	2611	7	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	99.3016431210008	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	51184974	51163105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51173233_51173467_51174173_51174288_51184625
ES.21451.44	chr3	-	1593	7	NNC	ENSMUSG00000037174.19	novel	1083	7	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	45.8403025004562	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGTGTGCGTCACTTG	NA	False	NA	NA	False	AAAAAG	-7	NA	51248171	51172290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51172464_51174173_51174288_51184625_51185111_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.45	chr3	-	2400	5	NNC	ENSMUSG00000037174.19	novel	5919	10	NA	NA	5	-20047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.2590189414164	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTTAGTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	51248074	51192517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_51194194_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.46	chr3	-	200	1	Intergenic	novelGene_17761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACATCAACTTCCAGC	NA	False	NA	NA	False	NA	NA	NA	51225777	51225577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51225600_51225800
ES.21451.5	chr3	-	5571	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	-18	-2942	-18	-3	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCATTGTGATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	51185014	51160143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ES.21451.6	chr3	-	4022	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	-31	-638	-12	637	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTATGGGTGTTTTG	NA	False	NA	NA	False	TTTAAA	-23	NA	51248096	51162013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.7	chr3	-	3117	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	-64	-442	-64	7	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTCTCTGGTGATAT	NA	False	NA	1	True	AATATA	-21	NA	51185060	51162643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ES.21451.8	chr3	-	3494	11	NIC	ENSMUSG00000037174.19	novel	3353	10	NA	NA	-11	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	93.351004279547	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTCTCTGGTGATAT	NA	False	NA	1	True	AATATA	-21	NA	51248095	51162643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51207203_51207307_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21451.9	chr3	-	4094	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	-684	2509	-684	1	multi-exon	FALSE	canonical	3	55	junction_9	82.9231385897823	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTTTGGTCTCTGG	NA	False	NA	-5	True	AATATA	-15	NA	51248768	51162649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ES.21452.1	chr3	+	177	1	Intergenic	novelGene_17765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	51251813	51251990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51251800_51252000
ES.21452.2	chr3	+	292	1	Intergenic	novelGene_17766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTTGTATCATACAAC	NA	False	NA	NA	False	AATAGA	-27	NA	51251815	51252107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51251800_51252100
ES.21453.1	chr3	+	180	1	Intergenic	novelGene_17767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTTCCTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	51262576	51262756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51262600_51262800
ES.21454.1	chr3	+	135	1	Intergenic	novelGene_17768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51265160	51265295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51265200_51265300
ES.21455.1	chr3	-	184	1	Intergenic	novelGene_17769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAAGCTGTGTATATG	NA	False	NA	NA	False	NA	NA	NA	51279050	51278866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51278900_51279000
ES.21456.1	chr3	+	177	1	Intergenic	novelGene_17770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51287983	51288160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51288000_51288200
ES.21457.1	chr3	+	156	1	Intergenic	novelGene_17771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	51300649	51300805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51300600_51300800
ES.21458.1	chr3	-	1224	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	5	3	5	-3	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTCTAGTCTTTCTT	NA	False	NA	-3	True	AATAAA	-14	NA	51303964	51295835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
ES.21458.2	chr3	-	1387	4	FSM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	18	4	-5	-4	multi-exon	FALSE	canonical	0	0	junction_3	91.1604202613295	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTTCTAGTCTTTCT	NA	False	NA	-4	True	AATAAA	-13	NA	51303929	51295836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303648
ES.21459.1	chr3	-	199	1	Intergenic	novelGene_17772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATTCACAGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	51305018	51304819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51304800_51305000
ES.2146.1	chr1	-	2028	1	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	42631	12	1517	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAATATTGTTTCT	NA	False	NA	NA	False	AATAAA	-5	NA	185018962	185016934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_185016900_185019000
ES.2146.10	chr1	-	3424	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	18	-1132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	73.3292698598712	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061575	185018897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050842_185053077_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.12	chr1	-	3375	22	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	25	-1132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	78.9664815945316	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061568	185018897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055909_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.13	chr1	-	4792	22	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	52	-1133	intron_retention	FALSE	canonical	1	3	junction_14	74.4192328784853	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCTCTATGATATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	185061541	185018898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053077_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.14	chr1	-	3352	22	NIC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	17	-1133	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	78.9732581967091	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCTCTATGATATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	185061576	185018898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.15	chr1	-	3559	22	NIC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	17	-1133	intron_retention	FALSE	canonical	3	288	junction_19	32.0143108589462	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCTCTATGATATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	185061576	185018898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.16	chr1	-	3738	22	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	63	-1133	intron_retention	FALSE	non_canonical	0	0	junction_6	79.0942203426393	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCTCTATGATATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	185061530	185018898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027750_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.2	chr1	-	4993	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	86	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	77.2796788316992	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAATCTGTGTTCTGGT	NA	False	NA	NA	False	TATAAA	-26	NA	185061507	185017766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185030231_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.21	chr1	-	3556	12	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	11692	1977	11692	-1134	3prime_fragment	FALSE	canonical	3	306	junction_10	22.2966476374313	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGCTCTATGATATC	NA	False	NA	-3	True	ATTAAA	-16	NA	185049901	185018899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090
ES.2146.23	chr1	-	3381	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	103	-1134	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	102.13161982753	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGCTCTATGATATC	NA	False	NA	-3	True	ATTAAA	-16	NA	185061490	185018899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027876_185028607_185028711_185029669_185029771_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.25	chr1	-	3500	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	15	-1134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.1590072298381	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGCTCTATGATATC	NA	False	NA	-3	True	ATTAAA	-16	NA	185061578	185018899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020403_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.29	chr1	-	3480	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	-10	-1152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.0580038050119	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTTGACTCAGTA	NA	False	NA	-21	True	NA	NA	NA	185061603	185018917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019380_185020233_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.3	chr1	-	3583	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	-24	1912	-24	-1069	multi-exon	FALSE	canonical	3	288	junction_20	32.2887284275964	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGGATGACGAAGC	NA	False	NA	2	True	AATAAA	-36	NA	185061617	185018834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.30	chr1	-	3306	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	17	2148	17	-1305	multi-exon	FALSE	canonical	3	288	junction_20	32.2887284275964	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAATAATGTATGTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	185061576	185019070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.31	chr1	-	2553	18	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	29	9852	29	460	5prime_fragment	FALSE	canonical	3	288	junction_15	34.0313309744017	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGATTTTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	185061564	185026774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.32	chr1	-	178	2	Antisense	novelGene_ENSMUSG00000102526.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	185103637	185031566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_185031619_185103511
ES.2146.33	chr1	-	180	1	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	185031746	185031566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185031600_185031700
ES.2146.34	chr1	-	3959	13	NNC	ENSMUSG00000026618.12	novel	2431	13	NA	NA	65	32	intron_retention	FALSE	canonical	0	0	junction_1	99.845818640542	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATGACCTCAGTTTCA	NA	False	NA	NA	False	AAGAAA	-18	NA	185061528	185044010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185046286_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.35	chr1	-	161	1	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	185046871	185046710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185046700_185046900
ES.2146.36	chr1	-	1690	12	ISM	ENSMUSG00000026618.12	ENSMUST00000110974.4	2431	13	61	4046	61	-4046	5prime_fragment	FALSE	canonical	3	288	junction_9	39.6747103912316	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTTCTGATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	185061532	185048088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.37	chr1	-	241	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTCTATTTCTGGGCT	NA	False	NA	NA	False	AAAAAG	-5	NA	185060299	185060058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185060100_185060300
ES.2146.4	chr1	-	3294	21	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	42	-1071	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	80.5676113584113	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCTGTGGATGACGAA	NA	False	NA	0	True	AATAAA	-34	NA	185061551	185018836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055278_185057699_185057860_185059816_185059940_185061217
ES.2146.6	chr1	-	3407	22	NIC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	42	-1072	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	78.0481565395943	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCTGTGGATGACGA	NA	False	NA	-1	True	AATAAA	-33	NA	185061551	185018837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.7	chr1	-	3381	23	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	186	-1073	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.348280382438	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAGCTGTGGATGACG	NA	False	NA	-2	True	AATAAA	-32	NA	185061407	185018838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022841_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.8	chr1	-	4041	22	NNC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	16	-1132	intron_retention	FALSE	canonical	1	3	junction_13	73.9440862487086	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061577	185018897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050852_185053077_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.2146.9	chr1	-	5211	20	NIC	ENSMUSG00000026618.12	novel	5471	23	NA	NA	64	-1132	intron_retention	FALSE	canonical	3	288	junction_17	33.3854348124707	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061529	185018897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ES.21460.1	chr3	+	148	1	Intergenic	novelGene_17773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATAACTCTTT	NA	False	NA	NA	False	NA	NA	NA	51307422	51307570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51307400_51307600
ES.21461.1	chr3	+	3870	20	NNC	ENSMUSG00000063273.12	novel	712	6	NA	NA	-6103	1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.901956938732	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51316465	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51316561_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.10	chr3	+	5341	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-48	797	-48	-797	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGATGTTGTAATCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	51323388	51382609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.12	chr3	+	183	1	ISM	ENSMUSG00000063273.12	ENSMUST00000193266.6	7480	20	820	60357	-48	-26713	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCGAAGGGAGTGTCAGG	NA	False	NA	70	True	NA	NA	NA	51323388	51323571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_51323400_51323600
ES.21461.14	chr3	+	5498	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-47	1806	intron_retention	FALSE	canonical	1	1	junction_15	172.766362659176	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.15	chr3	+	4203	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-47	1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	132.840958373563	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349299_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.16	chr3	+	4193	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-47	1806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	133.941091777251	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345742_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.18	chr3	+	3894	18	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-47	1806	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	139.397666201987	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.19	chr3	+	3898	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-47	1806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.901956938732	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323389	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323520_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.2	chr3	+	4238	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-85	1937	-85	1830	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACCTGAGTTGGGCTTC	NA	False	NA	40	True	AATAAA	-33	NA	51323351	51381469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.20	chr3	+	7497	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-46	-1361	-46	839	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTTCACTTGTTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	51323390	51384767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.23	chr3	+	3126	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-45	3009	-45	758	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATATAGGTTCAGTTT	NA	False	NA	59	True	TATAAA	-13	NA	51323391	51380397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.24	chr3	+	5370	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-45	1806	intron_retention	FALSE	canonical	3	462	junction_17	44.1628579769398	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323391	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.25	chr3	+	6134	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-40	-4	-40	4	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCACTTTTCCCTTCTGC	NA	False	NA	7	True	AATAAA	-24	NA	51323396	51383410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.28	chr3	+	5299	18	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-24	-533	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	139.397666201987	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCATGACTAAAAGTAGT	NA	False	NA	NA	False	AATAAA	-11	NA	51323412	51382873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.29	chr3	+	5502	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-23	-526	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	137.068706300576	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAAAGTAGTGCCGATG	NA	False	NA	NA	False	AATAAA	-18	NA	51323413	51382880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.31	chr3	+	4068	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-23	1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.901956938732	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323413	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323714_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.32	chr3	+	4032	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-23	1806	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	134.93519249195	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323413	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.33	chr3	+	4142	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-21	1811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	133.407276357182	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGTGAATATTTCCA	NA	False	NA	21	True	AATAAA	-14	NA	51323415	51381450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351231_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.34	chr3	+	4682	22	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-17	1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	202.462370177444	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323419	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51369468_51369508_51370072_51370570_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.35	chr3	+	5438	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-15	-523	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	135.286629872365	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAGTGCCGATGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	51323421	51382883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51378905_51379004_51380020
ES.21461.36	chr3	+	4992	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-10	-988	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	134.93519249195	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTATTTGACAGTGGATA	NA	False	NA	7	True	AATAAA	-17	NA	51323426	51382418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.38	chr3	+	4187	20	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-9	1813	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	133.924297465111	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323427	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355719_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.39	chr3	+	4180	21	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-9	1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	174.721750220172	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323427	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51362036_51362072_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.4	chr3	+	5636	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-62	516	-62	-516	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCGATGTTGCTGGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	51323374	51382890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.40	chr3	+	7754	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-9	1129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	133.630013879436	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCTGTAAGTCCATT	NA	False	NA	NA	False	NA	NA	NA	51323427	51385057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355862_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.41	chr3	+	4138	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-9	1812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	133.407276357182	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTGAATATTTCCAC	NA	False	NA	22	True	AATAAA	-15	NA	51323427	51381451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350286_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.43	chr3	+	5710	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-9	389	-9	-389	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGAGTGTTGTGACAAA	NA	False	NA	NA	False	NA	NA	NA	51323427	51383017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.44	chr3	+	8615	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-8	1997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.901956938732	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGGATCTCATGAGTT	NA	False	NA	NA	False	TATAAA	-17	NA	51323428	51385925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343637_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.45	chr3	+	3711	16	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-8	1806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	149.851244758112	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323428	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351365_51363276_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.46	chr3	+	6868	19	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-8	-522	intron_retention	FALSE	canonical	0	0	junction_3	136.420917262224	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGTGCCGATGTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	51323428	51382884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345863_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.47	chr3	+	5024	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-8	-989	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	137.068706300576	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTATTTGACAGTGGAT	NA	False	NA	6	True	AATAAA	-16	NA	51323428	51382417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.48	chr3	+	4097	20	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-6	1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	132.890661740543	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323430	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378950_51379004_51380020
ES.21461.5	chr3	+	5163	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-55	982	-55	-982	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACAGTGGATACATTGT	NA	False	NA	13	True	AATAAA	-23	NA	51323381	51382424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.50	chr3	+	6120	21	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	168.394915303283	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCAAGTTTCACTTTTC	NA	False	NA	-1	True	AATAAA	-16	NA	51323430	51383402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.51	chr3	+	3329	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	-6	2767	-6	1000	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCACTGAGCACAAAG	NA	False	NA	7	True	AATAAA	-19	NA	51323430	51380639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.53	chr3	+	5435	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-5	1813	intron_retention	FALSE	canonical	3	462	junction_17	45.1259212142212	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323431	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.54	chr3	+	5596	21	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-5	-527	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	168.394915303283	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTAAAAGTAGTGCCGAT	NA	False	NA	NA	False	AATAAA	-17	NA	51323431	51382879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.56	chr3	+	4158	21	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	3	1810	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	168.394915303283	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTGTGAATATTTCC	NA	False	NA	20	True	AATAAA	-13	NA	51323439	51381449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.58	chr3	+	5446	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	6	-518	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	134.93519249195	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGCCGATGTTGCTGGA	NA	False	NA	NA	False	AATAAA	-26	NA	51323442	51382888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.6	chr3	+	7849	17	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-54	1811	intron_retention	FALSE	canonical	3	462	junction_15	45.2378695757216	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGTGAATATTTCCA	NA	False	NA	21	True	AATAAA	-14	NA	51323382	51381450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.60	chr3	+	5722	21	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	14	-525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.29429540062	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAAGTAGTGCCGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	51323450	51382881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51326459_51326631_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.63	chr3	+	7923	18	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	108	-524	intron_retention	FALSE	canonical	3	462	junction_16	46.3750320605379	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGTAGTGCCGATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	51323544	51382882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.66	chr3	+	2598	12	ISM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	163	17491	-117	-4564	5prime_fragment	FALSE	canonical	3	512	junction_1	34.9346497344129	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51323599	51365915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718
ES.21461.68	chr3	+	2664	10	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-98	1806	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	243.041580550619	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51323618	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51358730_51358804_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.69	chr3	+	4000	1	FSM	ENSMUSG00000103191.2	ENSMUST00000191756.2	111	1	-2800	-1089	-2800	1089	mono-exon	FALSE	NA	NA	NA	NA	NA	568	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	51328233	51332233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51328200_51332200
ES.21461.7	chr3	+	4105	19	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-54	1813	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	137.068706300576	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323382	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51323798_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.70	chr3	+	209	1	Intergenic	novelGene_17777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	601	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCTGTATGTAGGCGG	NA	False	NA	NA	False	NA	NA	NA	51333218	51333427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51333200_51333400
ES.21461.71	chr3	+	179	1	Intergenic	novelGene_17778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	598	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAACCTAAA	NA	False	NA	NA	False	NA	NA	NA	51337754	51337933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51337800_51337900
ES.21461.72	chr3	+	379	1	Intergenic	novelGene_17779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	598	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAAATGAAGGCATGT	NA	False	NA	NA	False	AAAACA	-15	NA	51337757	51338136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51337800_51338100
ES.21461.75	chr3	+	4896	13	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	6492	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.90445318746	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTATCAAGTTTCAC	NA	False	NA	-6	True	AATAAA	-11	NA	51355818	51383397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367377_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.76	chr3	+	7379	13	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	6509	-983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	163.268928628676	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGACAGTGGATACATTG	NA	False	NA	12	True	AATAAA	-22	NA	51355835	51382423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51355858_51355973_51356081_51358730_51360085_51361071_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.77	chr3	+	5095	12	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	6730	1813	intron_retention	FALSE	canonical	0	0	junction_11	246.308111824222	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51356056	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51378030_51378073
ES.21461.78	chr3	+	2810	11	ISM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	35292	1961	-8439	1806	3prime_fragment	FALSE	canonical	3	462	junction_9	52.7708252730616	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51358728	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.79	chr3	+	3997	11	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-8408	1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	177.724055771862	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51358759	51381452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51378030_51378073_51379004_51380020
ES.21461.8	chr3	+	4092	19	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-54	1811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	182.510620357309	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGTGAATATTTCCA	NA	False	NA	21	True	AATAAA	-14	NA	51323382	51381450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351215_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51377506_51377651_51378905_51379004_51380020
ES.21461.80	chr3	+	3736	11	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-3907	-982	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	223.872307353991	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACAGTGGATACATTGT	NA	False	NA	13	True	AATAAA	-23	NA	51363260	51382424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51372571_51372600_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.81	chr3	+	3849	9	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-2312	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	193.481547892816	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGACTAAAAGTAGTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	51364855	51382876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51364872_51366042_51366172_51367377_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.82	chr3	+	2944	8	ISM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	42074	1961	-1657	1806	3prime_fragment	FALSE	canonical	3	462	junction_6	59.7081336543841	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51365510	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ES.21461.83	chr3	+	4636	4	NNC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	3195	1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	294.279156961927	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTTGTGTGAATAT	NA	False	NA	16	True	AATAAA	-9	NA	51371355	51381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51373114_51377506_51378030_51378073_51379004_51380020
ES.21461.84	chr3	+	5563	2	NIC	ENSMUSG00000063273.12	novel	7480	20	NA	NA	-268	-528	intron_retention	FALSE	canonical	3	660	junction_1	0	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTAAAAGTAGTGCCGA	NA	False	NA	NA	False	AATAAA	-16	NA	51376298	51382878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_51379004_51380020
ES.21462.1	chr3	-	176	2	Antisense	novelGene_ENSMUSG00000103191.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGCAACAACAACAC	NA	False	NA	NA	False	NA	NA	NA	51342059	51308826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_51308945_51342001
ES.21462.10	chr3	-	318	1	Intergenic	novelGene_17774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAGCCAAA	9000	False	NA	NA	False	NA	NA	NA	51325288	51324970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51325000_51325300
ES.21462.11	chr3	-	2747	1	Intergenic	novelGene_17775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGGCTGCCAAATCTA	5757	False	NA	NA	False	NA	NA	NA	51328531	51325784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51325800_51328500
ES.21462.12	chr3	-	173	1	Intergenic	novelGene_17776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATATTT	5104	False	NA	NA	False	NA	NA	NA	51329184	51329011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51329000_51329200
ES.21462.13	chr3	-	185	1	Intergenic	novelGene_17780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	51341632	51341447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51341400_51341600
ES.21462.14	chr3	-	191	1	Intergenic	novelGene_17781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	51342058	51341867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51341900_51342100
ES.21462.2	chr3	-	3205	4	FSM	ENSMUSG00000104241.2_ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	52	-2008	28	175	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCTTTTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	51316357	51310089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ES.21462.3	chr3	-	890	4	Fusion	ENSMUSG00000104241.2_ENSMUSG00000037152.12	novel	1249	4	NA	NA	8	172	multi-exon	FALSE	canonical	2	87	junction_1	2948.32370452545	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACCCTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	51316377	51310092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_51310709_51314756_51314834_51315565_51315670_51316284
ES.21462.4	chr3	-	1250	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	18	-19	-6	19	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTTGTTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	51316391	51312078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ES.21462.5	chr3	-	489	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	-2	762	-2	16	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTTGTTTTGTTTTG	NA	False	NA	7	True	NA	NA	NA	51316411	51312859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ES.21462.7	chr3	-	1155	3	NIC	ENSMUSG00000037152.12	novel	1249	4	NA	NA	10	9	intron_retention	FALSE	canonical	3	5471	junction_1	496.5	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCACTGGTCAGTGCTG	NA	False	NA	-23	True	AATAAA	-27	NA	51316375	51312889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_51313041_51314756_51315670_51316284
ES.21462.9	chr3	-	2012	1	Antisense	novelGene_ENSMUSG00000063273.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTTTTTGTTTGTTT	9812	False	NA	NA	False	CATAAA	-25	NA	51324476	51322464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_51322500_51324500
ES.21463.1	chr3	-	171	1	Intergenic	novelGene_17782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	51347556	51347385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51347400_51347600
ES.21464.1	chr3	+	3186	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	44	262	44	-262	multi-exon	FALSE	canonical	3	63	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGTTTTCAGAAAAT	NA	False	NA	68	True	ATTAAA	-20	NA	51391430	51403391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51392002_51400776
ES.21464.2	chr3	+	2190	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	247	1055	247	-1055	multi-exon	FALSE	canonical	3	63	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGCTGACTTGTGA	NA	False	NA	NA	False	NA	NA	NA	51391633	51402598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51392002_51400776
ES.21465.1	chr3	+	183	1	Intergenic	novelGene_17783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	51433433	51433616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51433400_51433600
ES.21466.1	chr3	-	7372	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	40	-1	40	1	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTCAGTTTTGTTTT	NA	False	NA	1	True	ATTAAA	-16	NA	51468260	51422738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ES.21466.2	chr3	-	5032	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	229	2150	229	-2150	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTATGTGACACTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51468071	51424889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ES.21466.3	chr3	-	2084	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	24	5303	24	-5303	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTCTCTGGTCCTTT	NA	False	NA	NA	False	NA	NA	NA	51468276	51428042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ES.21466.4	chr3	-	1788	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	216	5407	216	-5407	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACCCGAAGCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	51468084	51428146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ES.21466.5	chr3	-	1555	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	213	5643	213	-5643	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGAGGCTGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	51468087	51428382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ES.21466.6	chr3	-	2187	1	Genic_Genomic	ENSMUSG00000037111.10	novel	NA	NA	NA	NA	-1281	-11291	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51469581	51467394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_51467400_51469600
ES.21467.1	chr3	+	183	1	Intergenic	novelGene_17784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAATATTTTTTAAAT	NA	False	NA	4	True	NA	NA	NA	51482739	51482922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51482700_51482900
ES.21468.1	chr3	-	177	1	Intergenic	novelGene_17785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATTCTGACTG	NA	False	NA	NA	False	NA	NA	NA	51486837	51486660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51486700_51486800
ES.21469.1	chr3	+	177	1	Intergenic	novelGene_17786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	51509819	51509996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51509800_51510000
ES.2147.1	chr1	-	179	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTATAATATTAA	NA	False	NA	NA	False	NA	NA	NA	185115567	185115388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185115400_185115600
ES.21470.1	chr3	+	4504	1	Intergenic	novelGene_17787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTGCATATGTGTGC	NA	False	NA	NA	False	NA	NA	NA	51548322	51552826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51548300_51552800
ES.21471.1	chr3	+	873	5	NNC	ENSMUSG00000074604.10	novel	2803	3	NA	NA	-11812	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.40254569624358	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	51555968	51590096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_51556367_51571931_51572032_51584985_51585057_51589217_51589300_51589874
ES.21471.2	chr3	+	577	5	FSM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	26	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_1	6.68954408012983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	8651	False	NA	NA	False	AATAAA	-15	NA	51568625	51590096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589217_51589300_51589874
ES.21472.1	chr3	-	240	1	Intergenic	novelGene_17788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCAGTTCAAAATGT	2674	False	NA	NA	False	AAGAAA	-44	NA	51660114	51659874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_51659900_51660100
ES.21473.1	chr3	+	178	1	FSM	ENSMUSG00002076132.1	ENSMUST00020183798.1	117	1	106	-167	106	167	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGACTGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	51736438	51736616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_51736400_51736600
ES.21474.1	chr3	+	156	1	Intergenic	novelGene_17789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	51907324	51907480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_51907300_51907500
ES.21475.1	chr3	-	163	1	Intergenic	novelGene_17790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTGCAAGTCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	52155295	52155132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_52155100_52155300
ES.21476.1	chr3	+	5554	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	-1	3112	-1	-3112	multi-exon	FALSE	canonical	3	61	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTCTTTCCTAG	NA	False	NA	18	True	TATAAA	-33	NA	52175755	52257530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21476.10	chr3	+	4803	1	NIC	ENSMUSG00000044167.7	novel	8665	3	NA	NA	73943	-6140	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52249699	52254502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_52249700_52254500
ES.21476.2	chr3	+	2551	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	6	6108	6	-6108	multi-exon	FALSE	canonical	3	61	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTCTCCTTTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	52175762	52254534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21476.3	chr3	+	4969	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	13	3683	13	-3683	multi-exon	FALSE	canonical	3	61	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGATGTATGGAGTAT	NA	False	NA	NA	False	TATAAA	-17	NA	52175769	52256959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21476.4	chr3	+	4670	3	NNC	ENSMUSG00000044167.7	novel	8665	3	NA	NA	13	-3523	intron_retention	FALSE	canonical	0	0	junction_2	30.5	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCCCCAAAGGTGTTCA	NA	False	NA	NA	False	NA	NA	NA	52175769	52257119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_52176844_52252459_52253812_52254875
ES.21476.5	chr3	+	6125	2	ISM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	33	3112	33	-3112	intron_retention	FALSE	canonical	3	61	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTCTTTCCTAG	NA	False	NA	18	True	TATAAA	-33	NA	52175789	52257530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_52176844_52252459
ES.21476.6	chr3	+	3205	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	33	5427	33	-5427	multi-exon	FALSE	canonical	3	61	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGTCTGCTTATAAAT	NA	False	NA	NA	False	AATAGA	-43	NA	52175789	52255215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21476.7	chr3	+	4273	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	46	4346	46	-4346	multi-exon	FALSE	canonical	3	61	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTTGGCCAGCTTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	52175802	52256296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21476.8	chr3	+	3096	2	ISM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	66	6108	66	-6108	intron_retention	FALSE	canonical	3	61	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTCTCCTTTCCTCAG	NA	False	NA	NA	False	NA	NA	NA	52175822	52254534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_52176844_52252459
ES.21476.9	chr3	+	4764	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	98	3803	98	-3803	multi-exon	FALSE	canonical	3	61	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTTCATCTATGCAG	NA	False	NA	NA	False	NA	NA	NA	52175854	52256839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52176844_52252459_52253812_52254416
ES.21477.1	chr3	-	5557	1	Intergenic	novelGene_17791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTTCATGAACTAAAAACA	8961	False	NA	NA	False	NA	NA	NA	52189105	52183548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_52183500_52189100
ES.21478.1	chr3	-	2207	10	ISM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	14920	-1	-7632	1	3prime_fragment	TRUE	canonical	3	106	junction_7	15.7973274814304	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACATGTCATGTGTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	52909738	52889294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666
ES.21478.10	chr3	-	6717	19	NNC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	3	-4	intron_retention	TRUE	non_canonical	0	0	junction_6	48.4033974932431	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCTTTGTAGTATTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	52924628	52889546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52901044_52901316_52901949_52902008_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.11	chr3	-	2858	19	NNC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	-1	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	36.4150033521322	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTTTTCTTAATATAT	NA	False	NA	-44	True	AATAAA	-15	NA	52924632	52889585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916901_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.12	chr3	-	4564	18	NIC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	8	-49	intron_retention	FALSE	canonical	3	106	junction_7	14.864090166256	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTATCTGGTTTTCTTA	NA	False	NA	-50	True	AATAAA	-9	NA	52924623	52889591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.13	chr3	-	3750	16	NNC	ENSMUSG00000027742.14	novel	1504	13	NA	NA	0	215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.8229949688304	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCGATGCCTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	52924639	52900722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52901044_52901316_52901949_52902008_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922221_52922295_52922889_52923034_52924466
ES.21478.14	chr3	-	3155	14	NNC	ENSMUSG00000027742.14	novel	1504	13	NA	NA	3	-596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.9633539760953	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTCCCATGTATAATT	NA	False	NA	NA	False	AATAAA	-15	NA	52924655	52901533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52901949_52902008_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.15	chr3	-	707	5	FSM	ENSMUSG00000027742.14	ENSMUST00000193043.2	773	5	-6	72	0	-72	multi-exon	FALSE	canonical	3	140	junction_1	5.76085931090146	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGGGTTTTATTTCAA	NA	False	NA	NA	False	ATTAAA	-16	NA	52924639	52917849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.2	chr3	-	2940	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	-5	247	-5	0	multi-exon	FALSE	canonical	3	106	junction_7	14.5610676585896	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924663	52889542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.4	chr3	-	2989	20	NNC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	47.0737030411411	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924639	52889542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922221_52922295_52922889_52923034_52924466
ES.21478.5	chr3	-	7696	15	NIC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_7	13.4409137808895	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924637	52889542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52909759_52909833_52909963_52914666_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ES.21478.6	chr3	-	4179	15	NIC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	3613	-1	intron_retention	FALSE	canonical	3	106	junction_7	16.0998161987227	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGTAGTATTTTTAT	NA	False	NA	-2	True	ATTAAA	-17	NA	52921018	52889543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52918109_52920326
ES.21478.7	chr3	-	4566	5	NNC	ENSMUSG00000027742.14	novel	2726	6	NA	NA	1825	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.5698712445125	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGTAGTATTTTTAT	NA	False	NA	-2	True	ATTAAA	-17	NA	52900281	52889543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52893031_52893090_52893902_52896530_52896585_52897379_52897488_52900175
ES.21478.8	chr3	-	2885	19	NNC	ENSMUSG00000027742.14	novel	3182	19	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	56.4822707898704	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTTGTAGTATTTTT	NA	False	NA	-4	True	ATTAAA	-15	NA	52924632	52889545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916965_52917996_52918109_52920326_52920386_52921235_52921305_52922889_52923034_52924472
ES.21479.1	chr3	+	2117	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	-12	3	-12	1	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTACTGAGTCACCGA	NA	False	NA	NA	False	AATAAA	-14	NA	52948936	53169097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ES.2148.1	chr1	-	2660	3	FSM	ENSMUSG00000097615.2	ENSMUST00000180623.2	2761	3	96	5	96	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAAGTGTCTCAGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	185187669	185179317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185181412_185186201_185186331_185187232
ES.2148.2	chr1	-	2540	3	NNC	ENSMUSG00000097615.2	novel	2761	3	NA	NA	98	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAAGTGTCTCAGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	185187667	185179317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185181412_185186201_185186331_185187350
ES.21480.1	chr3	-	6579	1	Genic_Genomic	ENSMUSG00000104968.2	novel	NA	NA	NA	NA	-5295	-1715	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTATGTCTATTCGCCAA	NA	False	NA	NA	False	AATAAA	-14	NA	53026127	53019548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_53019500_53026100
ES.21480.2	chr3	-	5212	1	Intergenic	novelGene_17792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	NA	False	NA	NA	False	NA	NA	NA	53026166	53020954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53021000_53026200
ES.21480.3	chr3	-	429	2	Antisense	novelGene_ENSMUSG00000048332.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	53026107	53020956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_53021169_53025890
ES.21481.1	chr3	-	178	1	Intergenic	novelGene_17793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATTAGTAAACT	NA	False	NA	NA	False	NA	NA	NA	53084222	53084044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53084000_53084200
ES.21482.1	chr3	-	178	1	Intergenic	novelGene_17794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	53221631	53221453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53221500_53221600
ES.21483.1	chr3	+	5521	13	NNC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	-852	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1583717823756	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGTGTTTTATTAAAT	NA	False	NA	25	True	AATAAA	-21	NA	53370234	53389183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_53371931_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ES.21483.10	chr3	+	1145	7	FSM	ENSMUSG00000049504.13	ENSMUST00000141418.2	1519	7	-202	576	64	-576	multi-exon	FALSE	canonical	3	46	junction_1	7.95124029458437	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTATGTGTAGCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	53371150	53381024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904
ES.21483.11	chr3	+	3133	5	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	9881	1381	-4584	454	intron_retention	FALSE	canonical	3	39	junction_1	6.48074069840786	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTCCTGATTTATTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	53380967	53387795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903
ES.21483.12	chr3	+	5567	3	NIC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	-4566	5	intron_retention	FALSE	canonical	3	45	junction_2	6	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAGACGAGTGGCATA	NA	False	NA	NA	False	NA	NA	NA	53380985	53387346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_53382188_53382735_53382832_53383077
ES.21483.13	chr3	+	3133	4	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	11988	-6	-2477	6	3prime_fragment	FALSE	canonical	3	36	junction_2	4.54606056566195	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAGTGTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	53383074	53389182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_53383123_53384903_53386588_53386980_53387132_53387932
ES.21483.14	chr3	+	4118	3	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	13959	-1181	-506	1181	3prime_fragment	FALSE	canonical	3	36	junction_1	3.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	53385045	53390357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_53386588_53386980_53387132_53387932
ES.21483.15	chr3	+	1248	1	Genic_Genomic	ENSMUSG00000049504.13	novel	NA	NA	NA	NA	2378	1	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTATAGAAGTGTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	53387929	53389177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_53387900_53389200
ES.21483.16	chr3	+	1514	1	Intergenic	novelGene_17795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAACTTTGAATCGTAG	NA	False	NA	NA	False	NA	NA	NA	53389240	53390754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_53389200_53390800
ES.21483.2	chr3	+	5765	10	NIC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	-809	5	intron_retention	FALSE	canonical	3	45	junction_8	8.02465337123013	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAGACGAGTGGCATA	NA	False	NA	NA	False	NA	NA	NA	53370277	53387346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53382188_53382735_53382832_53383077_53383123_53384903
ES.21483.3	chr3	+	5201	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-722	-7	-722	7	multi-exon	FALSE	canonical	3	36	junction_11	9.75071222469871	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGTGTTTTATTAAAT	NA	False	NA	25	True	AATAAA	-21	NA	53370364	53389183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ES.21483.4	chr3	+	4532	11	NNC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	-712	-15	intron_retention	FALSE	non_canonical	0	0	junction_7	18.1110463529858	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53370374	53387326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382104_53382188_53382735_53382832_53383077_53383123_53384903
ES.21483.5	chr3	+	1166	1	FSM	ENSMUSG00000049504.13	ENSMUST00000198186.2	940	1	-226	0	-85	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53371001	53372167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_53371000_53372200
ES.21483.6	chr3	+	8989	6	ISM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	-81	1850	-81	-15	intron_retention	FALSE	canonical	3	46	junction_1	8.68562030024339	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53371005	53387326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396
ES.21483.7	chr3	+	4927	12	NIC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	-57	5	intron_retention	FALSE	canonical	3	39	junction_7	9.03619901075577	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAGAAGTGTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	53371029	53389181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53387132_53387932
ES.21483.9	chr3	+	4406	12	NIC	ENSMUSG00000049504.13	novel	4472	13	NA	NA	5	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.6999789886414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAGAAGTGTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	53371091	53389181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_53371741_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ES.21484.1	chr3	-	4905	6	FSM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	-12	-8	-3	3	multi-exon	FALSE	canonical	3	21	junction_4	7.03135833249878	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTTTATTCATTTTAC	NA	False	NA	NA	False	AATAAA	-20	NA	53370756	53356000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
ES.21484.10	chr3	-	3866	6	FSM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	-40	1059	-31	-1059	multi-exon	FALSE	canonical	3	21	junction_4	7.03135833249878	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTAACCTGGCTCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	53370784	53357067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
ES.21484.11	chr3	-	5483	2	ISM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	7293	1068	5953	-1068	3prime_fragment	FALSE	canonical	3	39	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAATGTATGTAACC	NA	False	NA	NA	False	ATTAAA	-8	NA	53363451	53357076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_53360071_53360962
ES.21484.12	chr3	-	1232	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	89	3726	8	-3721	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGAGTCATGTTTTCTC	NA	False	NA	NA	False	AAGAAA	-17	NA	53370664	53359729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
ES.21484.2	chr3	-	4736	6	NNC	ENSMUSG00000042997.14	novel	5047	7	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	14.9879951961562	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	53370923	53356003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370813
ES.21484.3	chr3	-	5262	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	-215	0	-215	0	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	53370968	53356003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
ES.21484.4	chr3	-	5805	5	NIC	ENSMUSG00000042997.14	novel	5047	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	21	junction_3	7.25861557047899	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	53370767	53356003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
ES.21484.5	chr3	-	6926	6	NIC	ENSMUSG00000042997.14	novel	5047	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	23	junction_3	6.15142259969188	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTGGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	53370670	53356008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_53360071_53360962_53361076_53363846_53366107_53369052_53369201_53369732_53369886_53370480
ES.21484.6	chr3	-	6790	2	ISM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	7054	0	5714	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTGGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	53363690	53356008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_53360071_53360962
ES.21484.8	chr3	-	3689	6	NNC	ENSMUSG00000042997.14	novel	4885	6	NA	NA	-181	-1053	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	14.9879951961562	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGGCTCCTTGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	53370934	53357061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370813
ES.21484.9	chr3	-	4202	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	-217	1062	-217	-1057	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAACCTGGCTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	53370970	53357065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
ES.21485.1	chr3	-	12314	25	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-31	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.39075529894536	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTAATATTAT	NA	False	NA	0	True	AATAAA	-21	NA	53564807	53421355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422418_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53479705_53479958_53481951_53482078_53492906_53493138_53497135_53497283_53555305_53555396_53559365
ES.21485.10	chr3	-	9496	25	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-2346	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.39075529894536	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATTTTGTTTTTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	53561997	53421361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422371_53422440_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53479705_53479958_53481951_53482078_53492906_53493138_53497135_53497283_53555305_53555396_53559365
ES.21485.11	chr3	-	4255	19	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13127	-9	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_18	5.65166860534934	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAGAGACTAACGTC	NA	False	NA	NA	False	AATATA	-17	NA	53464816	53423281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53464729
ES.21485.12	chr3	-	3702	7	NIC	ENSMUSG00000037016.12	novel	3336	14	NA	NA	-4061	-437	intron_retention	FALSE	canonical	3	17	junction_6	3.97562014729219	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTGCGCCATGCATGC	NA	False	NA	NA	False	ATTAAA	-21	NA	53434502	53423813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_53424463_53426973_53427121_53427324_53427513_53428427_53429590_53429672_53429801_53431083_53431189_53433179
ES.21485.13	chr3	-	179	1	Intergenic	novelGene_17796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	53435476	53435297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53435300_53435500
ES.21485.14	chr3	-	5583	16	ISM	ENSMUSG00000037016.12	ENSMUST00000091137.6	12348	24	3381	20484	-1744	-18466	5prime_fragment	FALSE	canonical	1	4	junction_14	6.32314970740233	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAAGAACTTGGTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	53561395	53441842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53479705_53479958_53481951_53482078_53492906_53493138_53497135_53497283_53555305_53555396_53559365
ES.21485.2	chr3	-	6156	20	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13174	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.95454175122481	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTAATATTAT	NA	False	NA	0	True	AATAAA	-21	NA	53464863	53421355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53464729
ES.21485.3	chr3	-	7056	24	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-46265	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.6837294032607	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTTTTTAATAT	NA	False	NA	-3	True	AATAAA	-18	NA	53497954	53421358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53479705_53479958_53481951_53482078_53492906_53493138_53497135_53497283_53497673
ES.21485.4	chr3	-	6047	20	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13157	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.51545038303319	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTTTTTTAATAT	NA	False	NA	-3	True	AATAAA	-18	NA	53464846	53421358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53464818
ES.21485.5	chr3	-	6324	21	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-28808	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.62954782408499	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTTTGTTTTTTTAAT	NA	False	NA	-5	True	AATAAA	-16	NA	53480497	53421360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53479705_53479958_53480442
ES.21485.6	chr3	-	6143	20	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13165	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.95454175122481	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATTTTGTTTTTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	53464854	53421361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422371_53422440_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53457004_53457215_53458731_53458882_53464729
ES.21485.7	chr3	-	5890	19	NNC	ENSMUSG00000037016.12	novel	12348	24	NA	NA	-13124	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.22916373652081	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATTTTGTTTTTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	53464813	53421361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_53422351_53422422_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643_53444948_53446584_53446744_53448391_53448523_53451695_53451879_53452778_53452944_53455030_53455229_53458731_53458882_53464729
ES.21485.8	chr3	-	4862	11	ISM	ENSMUSG00000037016.12	ENSMUST00000197519.5	3336	14	6772	-1911	6772	-3	3prime_fragment	FALSE	canonical	3	10	junction_8	4.85901224530254	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATTTTGTTTTTTTAA	7268	False	NA	-6	True	AATAAA	-15	NA	53444917	53421361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_53424463_53426973_53427121_53427324_53427513_53428427_53428555_53429454_53429590_53429672_53429801_53431083_53431189_53433179_53433373_53442585_53442918_53443144_53443277_53444643
ES.21486.1	chr3	-	178	1	Intergenic	novelGene_17797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGCT	NA	False	NA	NA	False	NA	NA	NA	53667944	53667766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53667800_53667900
ES.21487.1	chr3	+	362	1	Intergenic	novelGene_17798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGCATAAACAA	NA	False	NA	NA	False	NA	NA	NA	53739108	53739470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_53739100_53739500
ES.21488.1	chr3	-	4864	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	30	-4	30	4	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTGATAAGTTGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	53771221	53760792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.2	chr3	-	2216	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	21	2653	21	1793	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGGCTACCTTTATT	NA	False	NA	NA	False	AATACA	-15	NA	53771230	53763449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.3	chr3	-	1996	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	20	2874	20	1572	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTCTTGTCAGTAAT	NA	False	NA	-4	True	ATTAAA	-24	NA	53771231	53763670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.4	chr3	-	6191	3	NIC	ENSMUSG00000027746.14	novel	787	4	NA	NA	30	1231	intron_retention	FALSE	canonical	3	324	junction_1	20	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	53771221	53764011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_53767695_53768635_53771092_53771169
ES.21488.5	chr3	-	1652	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	20	3218	20	1228	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGTCTTCAGGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	53771231	53764014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.6	chr3	-	3853	4	FSM	ENSMUSG00000027746.14	ENSMUST00000152414.2	787	4	-44	-3022	24	1228	multi-exon	FALSE	canonical	3	324	junction_1	19.09624744987	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGTCTTCAGGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	53771227	53764014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.7	chr3	-	986	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	24	3880	24	566	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTCTTTTTGAGGAT	NA	False	NA	-6	True	AATAAA	-21	NA	53771227	53764676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.8	chr3	-	826	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	26	4038	26	408	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAGTATAAGTTGCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	53771225	53764834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21488.9	chr3	-	381	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	23	4486	23	-40	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGGCATTCACCATAC	NA	False	NA	0	True	AATAAA	-30	NA	53771228	53765282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ES.21489.1	chr3	-	1486	3	Intergenic	novelGene_17799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTTAAAAGTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	53890019	53881736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_53882978_53883695_53883806_53889884
ES.2149.1	chr1	-	173	1	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATAAATTATTTT	NA	False	NA	NA	False	NA	NA	NA	185276374	185276201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185276200_185276400
ES.21490.1	chr3	+	2532	16	ISM	ENSMUSG00000027750.17	ENSMUST00000117373.8	3121	21	9035	-3	-7416	0	3prime_fragment	TRUE	canonical	0	0	junction_1	0.249443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTTCCTCAAATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54277564	54298458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54277766_54278251_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54290808_54290899_54291904_54291995_54292628_54292707_54296759_54296802_54297682
ES.21491.1	chr3	+	1530	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-25	-17	-25	17	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5415	False	NA	NA	False	NA	NA	NA	54388833	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_54388800_54390400
ES.21491.10	chr3	+	1489	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	17	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389497_54389535
ES.21491.11	chr3	+	1451	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	17	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389641_54389717
ES.21491.12	chr3	+	1241	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389605_54389872
ES.21491.13	chr3	+	1396	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389605_54389717
ES.21491.15	chr3	+	1438	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-22	17	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5418	False	NA	NA	False	NA	NA	NA	54388836	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389373_54389461
ES.21491.16	chr3	+	1260	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-18	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAGAAA	5422	False	NA	NA	False	NA	NA	NA	54388840	54390343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389536_54389778
ES.21491.17	chr3	+	1419	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-16	17	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5424	False	NA	NA	False	NA	NA	NA	54388842	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389533_54389634
ES.21491.18	chr3	+	1441	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-15	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5425	False	NA	NA	False	NA	NA	NA	54388843	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389581_54389640
ES.21491.19	chr3	+	1410	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-12	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5428	False	NA	NA	False	NA	NA	NA	54388846	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389679_54389766
ES.21491.2	chr3	+	1182	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389538_54389864
ES.21491.20	chr3	+	1204	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-12	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5428	False	NA	NA	False	NA	NA	NA	54388846	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389614_54389907
ES.21491.21	chr3	+	1268	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-10	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5430	False	NA	NA	False	NA	NA	NA	54388848	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389539_54389766
ES.21491.22	chr3	+	1160	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	4	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5444	False	NA	NA	False	NA	NA	NA	54388862	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389551_54389872
ES.21491.23	chr3	+	1105	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	8	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5470	False	NA	NA	False	NA	NA	NA	54388888	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389551_54389901
ES.21491.24	chr3	+	1205	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	58	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5520	False	NA	NA	False	NA	NA	NA	54388938	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389539_54389739
ES.21491.25	chr3	+	1023	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	113	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5575	False	NA	NA	False	NA	NA	NA	54388993	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389605_54389932
ES.21491.3	chr3	+	1377	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389560_54389691
ES.21491.4	chr3	+	1408	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389674_54389774
ES.21491.5	chr3	+	1397	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	-23	114	-23	-114	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTTGTAGCTTTGTCT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_54388800_54390200
ES.21491.6	chr3	+	1387	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	17	multi-exon	FALSE	canonical	1	168	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389605_54389745
ES.21491.7	chr3	+	1417	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-4	multi-exon	TRUE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAGAA	5417	False	NA	NA	False	NA	NA	NA	54388835	54390342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389515_54389604
ES.21491.8	chr3	+	1345	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	17	multi-exon	TRUE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAACATGCTTAGTCAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389560_54389742
ES.21491.9	chr3	+	1354	2	Genic_Genomic	ENSMUSG00000069014.5	novel	1488	1	NA	NA	-23	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5417	False	NA	NA	False	NA	NA	NA	54388835	54390344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54389918_54390072
ES.21492.1	chr3	+	205	1	Intergenic	novelGene_17800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAAGATTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	54529735	54529940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_54529700_54529900
ES.21493.1	chr3	+	5061	1	Antisense	novelGene_ENSMUSG00000104831.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAAATCTACCTGAAG	2284	False	NA	NA	False	NA	NA	NA	54540982	54546043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54541000_54546000
ES.21494.1	chr3	-	3188	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	-58	-1442	-58	1442	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGAGACTTGTGCCC	NA	False	NA	NA	False	AATAAA	-19	NA	54542047	54538859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54538900_54542000
ES.21494.2	chr3	-	2506	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	-59	-759	-59	759	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCAAGTGGTTTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	54542048	54539542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54539500_54542000
ES.21495.1	chr3	+	3190	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600152	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.10	chr3	+	2740	25	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	157.856122958711	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGTGTCTGTTCAT	NA	False	NA	33	True	TATAAA	-44	NA	54600235	54636182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.100	chr3	+	2617	20	NIC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	0	-331	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	119.579457004103	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTTGTTGACACTTGT	NA	False	NA	8	True	AATAAA	-12	NA	54600282	54623927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.102	chr3	+	2931	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	125.247595023504	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600282	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.104	chr3	+	2846	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	153.246332419409	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCGTGGTGTCTGTTC	NA	False	NA	31	True	TATAAA	-42	NA	54600283	54636180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619685_54621147_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.105	chr3	+	3143	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	166.838815627539	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600283	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.106	chr3	+	5628	25	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1	-2	intron_retention	FALSE	canonical	3	46	junction_2	164.900390808782	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600283	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602548_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.107	chr3	+	4550	25	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1	-2	intron_retention	FALSE	canonical	3	82	junction_1	133.120239873165	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600283	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.109	chr3	+	4894	24	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	3	-2	intron_retention	FALSE	canonical	3	91	junction_20	147.218623996483	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600285	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54619671_54620596_54620624_54621153_54621187_54622108_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.111	chr3	+	3748	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	197.750245924787	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGTCGTGGTGTCTG	NA	False	NA	28	True	TATAAA	-39	NA	54600286	54636177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625069_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635767
ES.21495.113	chr3	+	3272	26	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	8	-8	intron_retention	FALSE	canonical	3	82	junction_1	114.926759286077	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54600290	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.115	chr3	+	4477	26	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	10	-108	intron_retention	FALSE	canonical	3	82	junction_1	136.059104803758	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTGTTTTCCCGAG	NA	False	NA	NA	False	AATGAA	-5	NA	54600292	54635949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.116	chr3	+	3118	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	178.643031882681	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600292	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602548_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614472_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.117	chr3	+	3150	26	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_22	143.846863017585	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600292	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.118	chr3	+	5352	25	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	11	-3	intron_retention	FALSE	canonical	3	82	junction_1	144.662964382349	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCGTGGTGTCTGTTC	NA	False	NA	31	True	TATAAA	-42	NA	54600293	54636180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.119	chr3	+	3881	26	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_17	168.109992564392	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600299	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.12	chr3	+	5653	25	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	8	0	intron_retention	FALSE	canonical	3	42	junction_16	146.841089465979	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600235	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54622218_54622577_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.120	chr3	+	3851	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	148.99592941503	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600304	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.121	chr3	+	3079	24	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	153.778459950676	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600305	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.123	chr3	+	2875	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	148.278928147409	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600305	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.125	chr3	+	2138	20	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	26	62	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_19	150.285453226597	566	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATAGCTTGTGTACTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	54600308	54624320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058
ES.21495.126	chr3	+	2900	26	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_22	149.307821630349	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600308	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.127	chr3	+	3099	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	179.123224624838	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGTCGTGGTGTCTG	NA	False	NA	28	True	TATAAA	-39	NA	54600308	54636177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619685_54621144_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.128	chr3	+	4781	25	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	26	-2	intron_retention	FALSE	canonical	3	91	junction_21	136.570742504877	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600308	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.130	chr3	+	2987	27	NNC	ENSMUSG00000027751.14	novel	682	10	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.166559342688	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600309	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54601981_54602033_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.132	chr3	+	2877	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	158.444690665229	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600309	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.134	chr3	+	2339	20	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	30	-653	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	131.060642325448	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAATAGAATTCTCACT	NA	False	NA	NA	False	ATTAAA	-18	NA	54600312	54623605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.135	chr3	+	8853	21	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	33	0	intron_retention	FALSE	canonical	3	21	junction_1	159.604041302218	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600315	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.136	chr3	+	2366	19	NNC	ENSMUSG00000027751.14	novel	660	3	NA	NA	33	-651	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	120.933508922246	565	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAGAATTCTCACTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	54600315	54623607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.139	chr3	+	2909	26	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	211	-126	-87	0	3prime_fragment	FALSE	canonical	3	259	junction_19	83.2281106357702	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600438	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.141	chr3	+	4717	25	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-49	-7	intron_retention	FALSE	canonical	3	91	junction_21	119.187345233833	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCAGTCGTGGTGTCT	NA	False	NA	27	True	TATAAA	-38	NA	54600476	54636176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.142	chr3	+	2757	24	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	157.371521696938	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600492	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.143	chr3	+	5364	23	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-30	-8	intron_retention	FALSE	canonical	3	324	junction_5	66.5650120291905	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54600495	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.144	chr3	+	2763	25	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_14	153.487422575561	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600521	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.146	chr3	+	5045	24	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	1	intron_retention	FALSE	canonical	3	84	junction_17	111.926505051669	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTGTCTGTTCATTTG	NA	False	NA	36	True	AATACA	-22	NA	54600521	54636185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.147	chr3	+	3729	26	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	84	junction_19	143.174019989662	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600521	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.148	chr3	+	6499	22	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	84	junction_15	116.575591273326	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600521	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.149	chr3	+	2784	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	156.290505860792	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600521	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619691_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.15	chr3	+	7205	22	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	8	-2	intron_retention	FALSE	canonical	3	226	junction_15	101.858578765007	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600235	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.150	chr3	+	3124	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	137.670423838964	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTCGTGGTGTCTGT	NA	False	NA	29	True	TATAAA	-40	NA	54600521	54636178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604308_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.151	chr3	+	7192	21	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	12	junction_20	143.325948453167	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600521	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635767
ES.21495.152	chr3	+	6210	22	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	84	junction_15	145.793815831447	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600521	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.154	chr3	+	3035	25	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	165.714362684711	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600521	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625814_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.156	chr3	+	3030	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_17	157.898955031374	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600521	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.157	chr3	+	3905	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-4	0	intron_retention	FALSE	canonical	3	12	junction_24	160.713767084701	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600521	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635767
ES.21495.158	chr3	+	5686	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.535089733477	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCGTGGTGTCTGTTC	NA	False	NA	31	True	TATAAA	-42	NA	54600521	54636180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54608740_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.159	chr3	+	5314	23	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	79	junction_19	113.679191929244	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600521	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.160	chr3	+	5606	24	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	42	junction_15	131.708577315125	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600521	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.162	chr3	+	2790	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_25	159.049174785662	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600522	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635767
ES.21495.163	chr3	+	4518	25	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-1	0	intron_retention	FALSE	canonical	3	198	junction_5	102.660545001476	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600524	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.164	chr3	+	155	1	Intergenic	novelGene_17801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	54601441	54601596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_54601400_54601600
ES.21495.165	chr3	+	2795	23	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	3836	-8	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_19	123.320787091737	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54604369	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.166	chr3	+	4198	20	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	5478	-2	intron_retention	FALSE	canonical	3	79	junction_16	130.940471979507	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54606011	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.167	chr3	+	4508	19	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-9502	0	intron_retention	FALSE	canonical	3	84	junction_12	145.384855376478	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54610156	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.168	chr3	+	3050	20	ISM	ENSMUSG00000027751.14	ENSMUST00000200439.2	3753	26	9956	235	-9169	-108	3prime_fragment	FALSE	canonical	3	84	junction_13	109.566256406506	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTGTTTTCCCGAG	NA	False	NA	NA	False	AATGAA	-5	NA	54610489	54635949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.169	chr3	+	4112	19	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-9083	-4	intron_retention	FALSE	canonical	3	226	junction_12	84.2724124857764	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTCGTGGTGTCTGTT	NA	False	NA	30	True	TATAAA	-41	NA	54610575	54636179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.17	chr3	+	2760	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	160.608472993246	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54600239	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614561_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.170	chr3	+	4108	18	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-5382	0	intron_retention	FALSE	canonical	3	84	junction_11	111.777677265848	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54614276	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.171	chr3	+	4126	18	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-5382	-4	intron_retention	FALSE	canonical	3	421	junction_14	45.559117835984	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTCGTGGTGTCTGTT	NA	False	NA	30	True	TATAAA	-41	NA	54614276	54636179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.172	chr3	+	3461	17	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-5328	-8	intron_retention	FALSE	canonical	3	259	junction_10	77.5227537162477	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54614330	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.174	chr3	+	6186	13	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-3076	-4	intron_retention	FALSE	canonical	3	42	junction_5	174.285844392353	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTCGTGGTGTCTGTT	NA	False	NA	30	True	TATAAA	-41	NA	54616582	54636179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54616609_54616693_54616751_54617821_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.175	chr3	+	4925	10	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-819	-6	intron_retention	FALSE	canonical	3	226	junction_3	104.437115582111	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGTCGTGGTGTCTG	NA	False	NA	28	True	TATAAA	-39	NA	54618839	54636177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.176	chr3	+	1614	13	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_9	143.652043919403	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54619508	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.177	chr3	+	3472	11	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	837	0	intron_retention	FALSE	canonical	3	421	junction_7	51.5256246929622	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54620495	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.178	chr3	+	3396	10	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1443	0	intron_retention	FALSE	canonical	3	421	junction_6	53.0683230711151	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54621101	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.179	chr3	+	4576	7	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1485	0	intron_retention	FALSE	canonical	3	79	junction_4	225.197259209688	579	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54621143	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989
ES.21495.180	chr3	+	887	4	ISM	ENSMUSG00000027751.14	ENSMUST00000200439.2	3753	26	29294	1	10169	0	3prime_fragment	FALSE	canonical	3	530	junction_3	34.2669260690571	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54629827	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.19	chr3	+	2624	20	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	13	12130	-3	-331	5prime_fragment	FALSE	canonical	3	324	junction_6	80.7416110579464	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTTGTTGACACTTGT	NA	False	NA	8	True	AATAAA	-12	NA	54600240	54623927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.2	chr3	+	3818	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	149.791246740255	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600221	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619685_54621144_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.20	chr3	+	3062	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	163.403627866703	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTGTCTGTTCATTTG	NA	False	NA	36	True	AATACA	-22	NA	54600241	54636185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619691_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.21	chr3	+	2832	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.453279694295	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600241	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600599_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.22	chr3	+	4109	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_2	164.20765915585	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCAGTCGTGGTGTC	NA	False	NA	26	True	TATAAA	-37	NA	54600241	54636175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600979_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.23	chr3	+	5005	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	170.896937695236	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTTTGCAGTCGTGGT	NA	False	NA	23	True	TATAAA	-34	NA	54600241	54636172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54618281_54618651_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.24	chr3	+	3756	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.832840711487	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCAGTCGTGGTGTCT	NA	False	NA	27	True	TATAAA	-38	NA	54600241	54636176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610497_54610596_54614280_54614366_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.25	chr3	+	7897	22	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	79	junction_18	133.904948181134	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGTGTCTGTTCAT	NA	False	NA	33	True	TATAAA	-44	NA	54600241	54636182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54621187_54622108_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.26	chr3	+	7811	24	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-7	intron_retention	FALSE	canonical	0	0	junction_9	131.30133886561	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCAGTCGTGGTGTCT	NA	False	NA	27	True	TATAAA	-38	NA	54600241	54636176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54610596_54614280_54614398_54614508_54614563_54615681_54615818_54616451_54616609_54616693_54616751_54617821_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.27	chr3	+	5381	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	84	junction_19	146.469382466098	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGTCGTGGTGTCTG	NA	False	NA	28	True	TATAAA	-39	NA	54600241	54636177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.28	chr3	+	3176	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_2	150.138397692058	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600241	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600979_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.29	chr3	+	5385	24	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	198	junction_6	93.9717207994985	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGTGTCTGTTCAT	NA	False	NA	33	True	TATAAA	-44	NA	54600241	54636182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.3	chr3	+	2849	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	120.844519648158	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600222	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.30	chr3	+	3004	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	159.830159857268	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCAGTCGTGGTGTCT	NA	False	NA	27	True	TATAAA	-38	NA	54600241	54636176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600835_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.31	chr3	+	3208	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	160.119592878787	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600242	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600979_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616613_54616700_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.33	chr3	+	5644	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	0	intron_retention	FALSE	canonical	3	226	junction_18	96.2717417723856	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600242	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.36	chr3	+	2974	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	159.704800378351	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTCTGTTCATTTGT	NA	False	NA	37	True	AATACA	-23	NA	54600242	54636186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.38	chr3	+	3618	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	175.769182610478	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTCGTGGTGTCTGTT	NA	False	NA	30	True	TATAAA	-41	NA	54600242	54636179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54606013_54606081_54608907_54609038_54610491_54610596_54614366_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.39	chr3	+	3013	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.725191857739	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600242	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600300_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.4	chr3	+	3081	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	123.457177013785	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600227	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.40	chr3	+	3072	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	53	junction_2	133.639849848223	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTGTCTGTTCATTTG	NA	False	NA	36	True	AATACA	-22	NA	54600242	54636185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600835_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.41	chr3	+	3786	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	259	junction_19	90.7232803639727	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600242	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.42	chr3	+	3771	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	84	junction_20	143.92632484104	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTTCATTTGTGT	NA	False	NA	39	True	AATACA	-25	NA	54600243	54636188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.43	chr3	+	4715	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_14	147.373179943525	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600244	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54619685_54621144_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.44	chr3	+	7759	21	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	-2	intron_retention	FALSE	canonical	3	198	junction_6	99.8986861775469	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600244	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.45	chr3	+	4722	26	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_17	144.460297659945	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600244	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.46	chr3	+	6300	23	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	-2	intron_retention	FALSE	canonical	3	324	junction_6	79.036985274758	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600244	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.47	chr3	+	8065	21	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	162.685463394859	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600244	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600300_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.48	chr3	+	3092	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	136.809321319857	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600245	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619685_54621144_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.49	chr3	+	6966	23	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_19	120.306229443762	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600245	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54619671_54620596_54620624_54621153_54621187_54622108_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.50	chr3	+	2626	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	2	-108	combination_of_known_junctions	FALSE	canonical	3	198	junction_6	101.803856252742	580	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTGTTTTCCCGAG	NA	False	NA	NA	False	AATGAA	-5	NA	54600247	54635949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.51	chr3	+	3067	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	135.116151514169	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600247	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.52	chr3	+	3254	18	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	20	12127	2	-328	intron_retention	FALSE	canonical	3	324	junction_6	83.6526845133949	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTGACACTTGTCAT	NA	False	NA	11	True	AATAAA	-15	NA	54600247	54623930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108
ES.21495.53	chr3	+	3507	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	198	junction_6	103.672561461555	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989
ES.21495.55	chr3	+	3047	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	156.836393735638	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGTCGTGGTGTCTG	NA	False	NA	28	True	TATAAA	-39	NA	54600248	54636177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619685_54621144_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.56	chr3	+	2603	19	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	-320	combination_of_known_splicesites	FALSE	canonical	2	12	junction_15	151.795641131973	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTTGTCATGTTGTGGG	NA	False	NA	19	True	AATAAA	-23	NA	54600248	54623938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.57	chr3	+	3040	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.638781055187	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610521_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.58	chr3	+	4710	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	79	junction_22	113.485153213978	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.59	chr3	+	5596	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	3	0	intron_retention	FALSE	canonical	1	11	junction_16	169.725444173819	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600835_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621329_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.60	chr3	+	3937	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_17	145.637635952789	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600248	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621329_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.61	chr3	+	2695	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	135.664904820665	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCAGTCGTGGTGTCT	NA	False	NA	27	True	TATAAA	-38	NA	54600249	54636176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.62	chr3	+	2954	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	153.645482849318	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600249	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.63	chr3	+	2847	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	160.678922003888	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600249	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606017_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622222_54622583_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.66	chr3	+	3084	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	136.809321319857	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600251	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619691_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.67	chr3	+	3432	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_2	131.895113654438	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTCGTGGTGTCTGTT	NA	False	NA	30	True	TATAAA	-41	NA	54600254	54636179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600979_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.69	chr3	+	3286	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_18	153.932744862256	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600257	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600281_54600523_54600835_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.7	chr3	+	4669	25	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_1	165.451649323568	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCGTGGTGTCTGTTCA	NA	False	NA	32	True	TATAAA	-43	NA	54600232	54636181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600300_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635767
ES.21495.70	chr3	+	4405	24	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	198	junction_6	107.328832383799	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600258	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.73	chr3	+	3310	26	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-4	0	intron_retention	FALSE	canonical	3	226	junction_19	87.4338698674604	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600274	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.75	chr3	+	4006	26	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	84	junction_19	118.963187583386	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTCGTGGTGTCTGT	NA	False	NA	29	True	TATAAA	-40	NA	54600277	54636178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.76	chr3	+	2828	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	141.269057990638	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600278	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.77	chr3	+	2848	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	125.83210025912	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600278	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.78	chr3	+	3143	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	150.317120403467	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTTCATTTGTG	NA	False	NA	38	True	AATACA	-24	NA	54600278	54636187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.8	chr3	+	3813	27	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_20	121.571660509566	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600233	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.81	chr3	+	2964	26	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	117.502789754116	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600278	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.82	chr3	+	3193	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.807398276195	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTCGTGGTGTCTGT	NA	False	NA	29	True	TATAAA	-40	NA	54600279	54636178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600417_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.83	chr3	+	2862	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	116.599933013266	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTGTCTGTTCATTTG	NA	False	NA	36	True	AATACA	-22	NA	54600279	54636185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.84	chr3	+	4982	25	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_15	184.976781576019	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619613_54620596_54620624_54621153_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.85	chr3	+	3080	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	128.35619817316	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCGTGGTGTCTGTTC	NA	False	NA	31	True	TATAAA	-42	NA	54600280	54636180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.86	chr3	+	7744	21	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_1	131.494591143514	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.87	chr3	+	3113	17	NIC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	2	-331	intron_retention	FALSE	canonical	0	0	junction_6	183.331656005585	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTTGTTGACACTTGT	NA	False	NA	8	True	AATAAA	-12	NA	54600280	54623927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108
ES.21495.88	chr3	+	3099	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	128.485425001709	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.9	chr3	+	2874	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_6	101.803856252742	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600234	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.90	chr3	+	2610	20	NIC	ENSMUSG00000027751.14	novel	1968	20	NA	NA	2	-330	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	143.093851773975	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTGTTGACACTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	54600280	54623928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.91	chr3	+	5443	24	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	2	0	intron_retention	FALSE	canonical	3	259	junction_17	86.2961884216555	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.92	chr3	+	3798	27	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	133.979890083346	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600280	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.93	chr3	+	10560	18	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	144.204199699845	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54610596_54614280_54614398_54614508_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54625067_54625654_54625813_54627826_54627883_54629915_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.94	chr3	+	2590	19	NIC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	2	-333	combination_of_known_splicesites	FALSE	canonical	2	12	junction_15	165.481116747501	565	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGTCTTGTTGACACTT	NA	False	NA	6	True	AATAAA	-10	NA	54600280	54623925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954
ES.21495.95	chr3	+	3066	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	150.695139762134	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600280	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.96	chr3	+	3172	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	127.784767267316	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTGTCTGTTCATTTG	NA	False	NA	36	True	AATACA	-22	NA	54600280	54636185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.97	chr3	+	3785	27	NIC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	141.968764795341	581	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600280	54636184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54600303_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.98	chr3	+	3197	26	NNC	ENSMUSG00000027751.14	novel	3700	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	120.343840723155	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGTGTCTGTTCAT	NA	False	NA	33	True	TATAAA	-44	NA	54600280	54636182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600524_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ES.21495.99	chr3	+	2816	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	168.284403711528	581	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTGGTGTCTGTTCATT	NA	False	NA	34	True	TATAAA	-45	NA	54600281	54636183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622212_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
ES.21496.1	chr3	+	1228	10	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	-1048	-359	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	151.571113570943	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54641911	54656857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54642139_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.10	chr3	+	4381	8	NIC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	0	-359	intron_retention	FALSE	canonical	3	432	junction_5	44.2386847056939	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54642979	54656857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54656115_54656649
ES.21496.11	chr3	+	4893	7	NIC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	1	-9	intron_retention	FALSE	canonical	3	504	junction_4	15.5205956357638	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGGCTCAAGGTGTCC	NA	False	NA	9	True	AATAAA	-13	NA	54642980	54657207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.13	chr3	+	1558	11	NNC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	227.434408126827	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAAGGTGTCCTCTTC	NA	False	NA	14	True	AATAAA	-18	NA	54642982	54657212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653016_54653133_54653886_54654039_54656028_54656115_54656649
ES.21496.14	chr3	+	5504	8	NIC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	3	-365	intron_retention	FALSE	canonical	3	42	junction_1	165.251200248814	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTATCTGCCTTTGTAT	NA	False	NA	14	True	AATAAA	-18	NA	54642990	54656851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54654039_54656028_54656115_54656649
ES.21496.2	chr3	+	5044	9	NIC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	-441	2	intron_retention	FALSE	canonical	3	42	junction_1	156.330379325325	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTCCTCTTCCTTGCT	NA	False	NA	20	True	AATAAA	-24	NA	54642518	54657218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.3	chr3	+	1149	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-36	358	-36	-358	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGTATATTCTTG	NA	False	NA	21	True	AATAAA	-25	NA	54642923	54656858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.4	chr3	+	1509	9	NIC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	-4	-359	intron_retention	FALSE	canonical	3	42	junction_2	159.817425129427	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54642955	54656857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.5	chr3	+	1477	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	-4	-2	-4	2	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTCCTCTTCCTTGCT	NA	False	NA	20	True	AATAAA	-24	NA	54642955	54657218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ES.21496.6	chr3	+	1083	10	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	0	-360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	163.314813764893	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCTTTGTATATTCT	NA	False	NA	19	True	AATAAA	-23	NA	54642979	54656856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656657
ES.21496.7	chr3	+	3077	9	NIC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	0	-362	intron_retention	FALSE	canonical	3	42	junction_2	157.692689668862	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGCCTTTGTATATT	NA	False	NA	17	True	AATAAA	-21	NA	54642979	54656854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54656115_54656649
ES.21496.8	chr3	+	1208	11	NNC	ENSMUSG00000036632.10	novel	1471	10	NA	NA	0	-359	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	204.429180891574	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTTTGTATATTCTT	NA	False	NA	20	True	AATAAA	-24	NA	54642979	54656857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653016_54653133_54653886_54654039_54656028_54656115_54656649
ES.21496.9	chr3	+	3807	9	NIC	ENSMUSG00000036632.10	novel	2972	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_2	159.694581545524	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	False	NA	18	True	AATAAA	-22	NA	54642979	54657216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ES.21497.1	chr3	-	1316	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	-16	0	-16	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642830	54636098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.10	chr3	-	3238	7	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1645	junction_6	206.852335952217	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642468	54636102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.11	chr3	-	3200	8	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	150	-3	intron_retention	FALSE	canonical	3	1645	junction_7	213.190534690527	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642638	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.12	chr3	-	1840	9	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1645	junction_8	201.288932569578	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642467	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.13	chr3	-	2986	8	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	16	junction_3	752.798913443446	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642461	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54639602_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.14	chr3	-	4703	5	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	2	-3	intron_retention	FALSE	canonical	3	1645	junction_4	248.580344154561	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642465	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54639639_54640120_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.15	chr3	-	4030	6	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	-55	-3	intron_retention	FALSE	canonical	3	1645	junction_5	225.848976088004	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642522	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.16	chr3	-	3108	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	1829	junction_5	135.906422054131	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642828	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639639_54640120_54641153_54641523
ES.21497.17	chr3	-	1235	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	647.592348626819	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642425	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642097
ES.21497.18	chr3	-	907	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	647.55170449934	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642465	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639602_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.19	chr3	-	2511	8	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1645	junction_7	210.373137883279	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642459	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54637307_54638495_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.20	chr3	-	1508	9	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	1645	junction_8	184.443588937106	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642462	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.22	chr3	-	2310	8	FSM	ENSMUSG00000027752.16	ENSMUST00000150923.8	2316	8	3	3	1	-3	multi-exon	FALSE	canonical	3	1645	junction_7	192.173603487969	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642455	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.23	chr3	-	3445	7	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16	junction_2	799.526457070406	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642456	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54639602_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.24	chr3	-	3334	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	14	-3	intron_retention	FALSE	canonical	3	1829	junction_3	151.084965058296	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642442	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54638593_54639401_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716
ES.21497.25	chr3	-	917	9	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	28	junction_3	700.44218176806	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	False	NA	-19	True	AATAAA	-20	NA	54642455	54636105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637302_54639401_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.26	chr3	-	941	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	643.841913826678	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATATTTCTAGTCCTT	NA	False	NA	-20	True	AATAAA	-19	NA	54642465	54636106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639441_54639527_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.27	chr3	-	952	11	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	627.010334843055	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATATTTCTAGTCCT	NA	False	NA	-21	True	AATAAA	-18	NA	54642463	54636107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639651_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.28	chr3	-	904	10	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	677.23945835326	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATATTTCTAGTCCT	NA	False	NA	-21	True	AATAAA	-18	NA	54642468	54636107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639527_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.29	chr3	-	1039	10	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-15	-5	intron_retention	FALSE	canonical	3	50	junction_3	656.008769890189	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATATTTCTAGTCCT	NA	False	NA	-21	True	AATAAA	-18	NA	54642482	54636107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54636315_54636614_54636722_54637185_54637302_54638495_54638593_54639401_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.3	chr3	-	822	10	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	673.730905728194	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGTCCTTACGTTGT	NA	False	NA	-13	True	AATAAA	-26	NA	54642458	54636099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.30	chr3	-	828	10	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	677.402847118279	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGATATTTCTAGTCCT	NA	False	NA	-21	True	AATAAA	-18	NA	54642457	54636107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.31	chr3	-	4020	1	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	515	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGATATTTCTAGTC	NA	False	NA	-23	True	AATAAA	-16	NA	54640129	54636109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636100_54640100
ES.21497.32	chr3	-	1411	10	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	1	-8	intron_retention	FALSE	canonical	3	1645	junction_9	177.65912707232	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAAAGATATTTCTAGT	NA	False	NA	-24	True	AATAAA	-15	NA	54642455	54636110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.33	chr3	-	3012	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	5	-385	intron_retention	FALSE	canonical	3	1645	junction_6	217.071736734401	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAGGACCTATCTGTC	NA	False	NA	NA	False	AATAAA	-37	NA	54642809	54636487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636722_54637185_54637307_54638495_54639639_54640120_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.34	chr3	-	4787	4	NIC	ENSMUSG00000027752.16	novel	412	7	NA	NA	0	-403	intron_retention	FALSE	canonical	3	1645	junction_3	270.089285648695	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCGCATCATTCTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	54642467	54636505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.35	chr3	-	3863	5	FSM	ENSMUSG00000027752.16	ENSMUST00000127112.8	1983	5	331	-2211	-1	-405	multi-exon	FALSE	canonical	3	1645	junction_4	239.481732079923	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGCGCATCATTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	54642457	54636507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.36	chr3	-	2268	7	ISM	ENSMUSG00000027752.16	ENSMUST00000150923.8	2316	8	-57	405	-48	-405	5prime_fragment	FALSE	canonical	3	1645	junction_6	199.606835776957	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGCGCATCATTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	54642515	54636507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_54636722_54637185_54637307_54638495_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.37	chr3	-	2682	2	ISM	ENSMUSG00000027752.16	ENSMUST00000150923.8	2316	8	2805	405	991	-405	intron_retention	FALSE	canonical	3	2135	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGCGCATCATTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	54639653	54636507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_54636722_54637185
ES.21497.38	chr3	-	2190	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	-406	intron_retention	FALSE	canonical	3	1645	junction_6	217.655436157448	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTGCGCATCATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	54642456	54636508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54637307_54638495_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.39	chr3	-	4662	5	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-13	-406	intron_retention	FALSE	canonical	3	1645	junction_4	248.580344154561	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTGCGCATCATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	54642827	54636508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54639639_54640120_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.4	chr3	-	3991	6	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	1645	junction_5	226.758902802073	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGTCCTTACGTTGT	NA	False	NA	-13	True	AATAAA	-26	NA	54642830	54636099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54639639_54640120_54640167_54641078_54641153_54641523_54641754_54642428
ES.21497.40	chr3	-	3387	6	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	3	-406	intron_retention	FALSE	canonical	3	1645	junction_5	232.183892636849	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTGCGCATCATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	54642464	54636508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.42	chr3	-	1040	6	NIC	ENSMUSG00000027752.16	novel	412	7	NA	NA	0	169	intron_retention	FALSE	canonical	3	1645	junction_5	222.443700742458	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTCCAGCTGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	54642456	54639244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54639448_54639532_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.43	chr3	-	642	6	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	1	169	intron_retention	FALSE	canonical	3	1645	junction_5	232.183892636849	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTCCAGCTGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	54642455	54639244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.5	chr3	-	2783	7	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1645	junction_6	207.086737061229	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTAGTCCTTACGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	54642459	54636100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54637307_54638495_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.6	chr3	-	4416	6	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_5	225.536338535501	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTAGTCCTTACGTT	NA	False	NA	-15	True	AATAAA	-24	NA	54642456	54636101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54636722_54637185_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.7	chr3	-	3859	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1645	junction_6	227.773827879032	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642830	54636102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.8	chr3	-	5249	5	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1645	junction_4	250.749376868618	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642826	54636102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54641153_54641523_54641588_54641716_54641754_54642428
ES.21497.9	chr3	-	3420	6	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	1	0	intron_retention	FALSE	canonical	2	59	junction_4	790.013316343465	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642455	54636102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54636315_54636614_54639639_54640120_54640167_54641078_54641153_54641716_54641754_54642428
ES.21498.1	chr3	-	1318	1	Intergenic	novelGene_17802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGCGGAGAGAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	54645300	54643982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_54644000_54645300
ES.21499.1	chr3	+	329	1	Intergenic	novelGene_17803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTAACCTTTCTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	54672000	54672329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_54672000_54672300
ES.215.1	chr1	-	1638	3	NNC	ENSMUSG00000086727.9	novel	1765	5	NA	NA	1	-22452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCATTTCTTCCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	31261737	31203249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_31204485_31243332_31243555_31261556
ES.2150.1	chr1	-	2139	2	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTACCAGGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	185355537	185301773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_185301971_185353595
ES.21500.1	chr3	+	1789	7	NNC	ENSMUSG00000027796.3	novel	5368	6	NA	NA	26059	-3641	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.53774924194538	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGTTTATATCACCGT	NA	False	NA	NA	False	AATACA	-16	NA	54689061	54705037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54689368_54689575_54689695_54689825_54690194_54693484_54693743_54696606_54696829_54701652_54701910_54704778
ES.21500.2	chr3	+	1408	4	NNC	ENSMUSG00000027796.3	novel	5368	6	NA	NA	26442	-10820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.49691252107735	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGGTTACCTGTGACT	NA	False	NA	NA	False	CATAAA	-8	NA	54689444	54697858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_54690194_54693484_54693743_54696606_54696829_54697679
ES.21500.3	chr3	+	1724	5	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	26463	3641	26463	-3641	3prime_fragment	FALSE	canonical	2	9	junction_1	3.04138126514911	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGTTTATATCACCGT	NA	False	NA	NA	False	AATACA	-16	NA	54689465	54705037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54690194_54693484_54693743_54696606_54696829_54701652_54701910_54704778
ES.21500.4	chr3	+	3783	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30474	862	30474	-862	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACATCGTCTTACCTG	382	False	NA	NA	False	AATAAA	-17	NA	54693476	54707816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
ES.21500.5	chr3	+	1889	4	ISM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	30650	2580	30650	-2580	3prime_fragment	FALSE	canonical	3	10	junction_1	2.62466929133727	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACCTTATGTGTAT	558	False	NA	NA	False	AATAAA	-9	NA	54693652	54706098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_54693743_54696606_54696829_54701652_54701910_54704778
ES.21500.6	chr3	+	3006	1	NIC	ENSMUSG00000027796.3	novel	5368	6	NA	NA	31840	-10830	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTGTAGTTGAGGTT	1748	False	NA	NA	False	AATACA	-8	NA	54694842	54697848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_54694800_54697800
ES.21501.1	chr3	-	5364	1	Antisense	novelGene_ENSMUSG00000027796.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54693710	54688346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_54688300_54693700
ES.21501.2	chr3	-	159	1	Intergenic	novelGene_17804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	54691171	54691012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_54691000_54691200
ES.21502.1	chr3	+	3817	1	Genic_Genomic	ENSMUSG00000027796.3	novel	NA	NA	NA	NA	45547	3688	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACATATAAAGTATATCA	NA	False	NA	NA	False	GATAAA	-42	NA	54708549	54712366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_54708500_54712400
ES.21503.1	chr3	-	2419	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	-256	-1	-256	1	multi-exon	FALSE	canonical	3	271	junction_1	17.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCTGTACTTATTTC	NA	False	NA	1	True	ATTAAA	-22	NA	54715468	54710534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54711997_54712780_54712889_54714619
ES.21503.2	chr3	-	1083	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	-1	1080	-1	26	multi-exon	FALSE	canonical	3	271	junction_1	17.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTCATATCACTGTG	NA	False	NA	-2	True	AATAAA	-23	NA	54715213	54711615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_54711997_54712780_54712889_54714619
ES.21504.1	chr3	+	2084	2	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGGGCCATTCTCGTG	NA	False	NA	4	True	GATAAA	-16	NA	54794232	54807702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54794945_54806330
ES.21504.2	chr3	+	1443	2	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGGGCCATTCTCGTG	NA	False	NA	4	True	GATAAA	-16	NA	54794233	54807702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54794305_54806330
ES.21504.3	chr3	+	2120	7	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.15470053837925	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGGGCCATTCTCGTGT	NA	False	NA	5	True	GATAAA	-17	NA	54794233	54807703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54794305_54794833_54794945_54796745_54796928_54797697_54797759_54799469_54799651_54801365_54801507_54806330
ES.21504.4	chr3	+	3640	3	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGGCCATTCTCGTGTG	NA	False	NA	6	True	GATAAA	-18	NA	54797570	54807704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54799651_54801320_54801507_54806330
ES.21504.5	chr3	+	3665	3	Antisense	novelGene_ENSMUSG00000056306.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGGCCATTCTCGTGTG	NA	False	NA	6	True	GATAAA	-18	NA	54803733	54807704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_54806179_54806330_54807308_54807461
ES.21505.1	chr3	-	238	1	Intergenic	novelGene_17805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	54904528	54904290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_54904300_54904500
ES.21506.1	chr3	-	1412	8	NIC	ENSMUSG00000027793.7	novel	1564	9	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.0572763655761	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGGCTCTTTACTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	54962440	54952889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54953130_54954629_54954744_54955828_54956034_54957098_54957323_54957966_54958092_54958269_54958517_54961753_54961940_54962369
ES.21506.2	chr3	-	1460	9	NNC	ENSMUSG00000027793.7	novel	1560	9	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.83242742918897	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGGGGCTCTTTACTA	NA	False	NA	NA	False	AATAAA	-19	NA	54962444	54952891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_54953130_54953387_54953522_54954629_54954744_54955828_54956034_54957170_54957323_54957966_54958092_54958269_54958517_54961753_54961940_54962385
ES.21506.3	chr3	-	1991	8	ISM	ENSMUSG00000027793.7	ENSMUST00000198320.5	1564	9	0	0	0	0	intron_retention	FALSE	canonical	2	7	junction_5	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGGGGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	54962463	54952897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_54953130_54953387_54953522_54954629_54954744_54955828_54956034_54957098_54957323_54957966_54958092_54958269_54958517_54961753
ES.21506.4	chr3	-	4724	1	NIC	ENSMUSG00000027793.7	novel	1560	9	NA	NA	15	287	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	54962443	54957719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_54957700_54962400
ES.21507.1	chr3	+	3842	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	-63	-9	-63	9	multi-exon	TRUE	canonical	0	0	junction_4	65.469339197826	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGGACTTATATTTC	NA	False	NA	30	True	AATAAA	-31	NA	55019465	55044752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.10	chr3	+	3678	9	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	78.9381680494297	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGGCCTCAGATGTAT	NA	False	NA	12	True	AATAAA	-13	NA	55019529	55044734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.11	chr3	+	2762	10	NNC	ENSMUSG00000036580.16	novel	3981	9	NA	NA	-2	-1357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.5175509391144	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAATGTCAACCTATT	NA	False	NA	12	True	AATAAA	-23	NA	55019531	55043375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019913_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.12	chr3	+	3178	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-18	407	-2	-407	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTTCCATATCTGCTT	NA	False	NA	NA	False	ATTAAA	-32	NA	55019531	55044325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.14	chr3	+	2223	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-13	1357	3	-1357	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAATGTCAACCTATT	NA	False	NA	12	True	AATAAA	-23	NA	55019536	55043375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.15	chr3	+	4111	7	NIC	ENSMUSG00000036580.16	novel	3567	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	36	junction_3	62.4964443433029	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTCAGATGTATTC	NA	False	NA	14	True	AATAAA	-15	NA	55019536	55044736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035797_55035919_55036011_55042830
ES.21507.16	chr3	+	2705	9	NNC	ENSMUSG00000036580.16	novel	3981	9	NA	NA	3	-1359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.7503094053087	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTAATGTCAACCTA	NA	False	NA	10	True	AATAAA	-21	NA	55019536	55043373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019952_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.17	chr3	+	3849	8	NIC	ENSMUSG00000036580.16	novel	3981	9	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	65.2768046436848	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTCAGATGTATTC	NA	False	NA	14	True	AATAAA	-15	NA	55019545	55044736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_55019913_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.19	chr3	+	3824	9	NNC	ENSMUSG00000036580.16	novel	3981	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5880824606544	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGATGTATTCACTGGA	NA	False	NA	20	True	AATAAA	-21	NA	55019557	55044742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019723_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.2	chr3	+	2459	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	-52	1363	-52	-1352	multi-exon	FALSE	canonical	0	0	junction_4	65.469339197826	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCAACCTATTTTTGT	NA	False	NA	17	True	AATAAA	-28	NA	55019476	55043380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.21	chr3	+	2643	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-28	1366	0	-1360	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACCTAATGTCAACCT	NA	False	NA	9	True	AATAAA	-20	NA	55019558	55043372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.22	chr3	+	6667	8	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	1384	422	954	-416	3prime_fragment	FALSE	canonical	0	0	junction_3	63.0157090877881	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGAAATCACTTTTCCA	NA	False	NA	NA	False	ATTAAA	-23	NA	55020970	55044316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.4	chr3	+	3889	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	-22	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.9825598273974	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTGGACTTATATTT	NA	False	NA	29	True	AATAAA	-30	NA	55019506	55044751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.5	chr3	+	3447	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	-19	342	-19	-331	multi-exon	FALSE	canonical	0	0	junction_4	65.469339197826	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATATATCTCCACTCAG	NA	False	NA	NA	False	AGTAAA	-24	NA	55019509	55044401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.6	chr3	+	3617	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	-36	-14	-15	3	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTATTCACTGGACTTA	NA	False	NA	24	True	AATAAA	-25	NA	55019513	55044746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.7	chr3	+	3630	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-71	422	-13	-416	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGAAATCACTTTTCCA	NA	False	NA	NA	False	ATTAAA	-23	NA	55019515	55044316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.8	chr3	+	3438	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	-7	-417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.9825598273974	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGAAATCACTTTTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	55019521	55044315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21507.9	chr3	+	4047	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	-60	-6	-2	1	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATGTATTCACTGGACT	NA	False	NA	22	True	AATAAA	-23	NA	55019526	55044744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ES.21508.1	chr3	+	2462	9	NNC	ENSMUSG00000048655.18	novel	887	8	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.89983551919633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGGGCTTTAATGTACA	NA	False	NA	NA	False	AATAAA	-15	NA	55047394	55080354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55047594_55049661_55049742_55058132_55058244_55058325_55058367_55064453_55064553_55065965_55066020_55070741_55070819_55077780_55077913_55078685
ES.21508.2	chr3	+	2294	8	FSM	ENSMUSG00000048655.18	ENSMUST00000061099.14	887	8	-29	-1378	-29	-3	multi-exon	FALSE	canonical	1	1	junction_2	1.55182578445717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAGGGCTTTAATGTAC	NA	False	NA	NA	False	AATAAA	-14	NA	55047429	55080353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55047594_55049661_55049742_55058132_55058244_55058325_55058367_55064453_55064553_55065965_55066020_55070741_55070819_55078685
ES.21509.1	chr3	+	2459	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	-97	2	-97	-2	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGTGCAAGGAATCTG	NA	False	NA	18	True	AATAAA	-20	NA	55089351	55117376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ES.21509.10	chr3	+	7121	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	2215	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.2173339387747	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGTGTGCAAGGAATC	NA	False	NA	16	True	AATAAA	-18	NA	55091663	55117374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55091679_55091708_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ES.21509.2	chr3	+	1665	13	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.212313577831	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAATAGTGTGCAAGGA	NA	False	NA	13	True	AATAAA	-15	NA	55089450	55117371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307_55116444_55117019_55117110_55117223
ES.21509.3	chr3	+	2316	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.9241048271422	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAGTGTGCAAGGAAT	NA	False	NA	15	True	AATAAA	-17	NA	55089454	55117373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55089536_55096541_55096757_55097730_55097793_55097911_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ES.21509.4	chr3	+	2337	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.9241048271422	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAATAGTGTGCAAGGA	NA	False	NA	13	True	AATAAA	-15	NA	55089456	55117371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55089536_55096541_55096757_55097730_55097793_55097886_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ES.21509.5	chr3	+	2425	10	NIC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	14	-7	intron_retention	FALSE	canonical	3	238	junction_7	30.4010233745876	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAATAGTGTGCAAGGA	NA	False	NA	13	True	AATAAA	-15	NA	55089462	55117371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_55089536_55096541_55096757_55097730_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ES.21509.6	chr3	+	3371	10	ISM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	24	6	24	-6	intron_retention	FALSE	canonical	3	238	junction_8	30.2267153522783	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAGTGTGCAAGGAA	NA	False	NA	14	True	AATAAA	-16	NA	55089472	55117372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013
ES.21509.7	chr3	+	2330	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	25	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	88.1249680851006	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAATAGTGTGCAAGGA	NA	False	NA	13	True	AATAAA	-15	NA	55089473	55117371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111884_55115022_55115271_55116307
ES.21509.8	chr3	+	2354	11	NNC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	86.8064513731554	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAATAGTGTGCAAGG	NA	False	NA	12	True	AATAAA	-14	NA	55089474	55117370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116283
ES.21509.9	chr3	+	6504	9	ISM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	26	8	26	-8	intron_retention	FALSE	canonical	3	238	junction_8	31.8352693564857	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAATAGTGTGCAAGG	NA	False	NA	12	True	AATAAA	-14	NA	55089474	55117370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754
ES.2151.1	chr1	-	1590	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	24	-36	2	36	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGTACTATTCATT	NA	False	NA	NA	False	TTTAAA	-34	NA	185849483	185819891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ES.2151.10	chr1	-	1264	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	-36	-644	-14	-158	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAATTTACTGACTT	NA	False	NA	-20	True	AATAAA	-6	NA	185849521	185820085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
ES.2151.2	chr1	-	2597	6	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	61.9593415071529	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGTGTATAATAATA	NA	False	NA	NA	False	AATAAA	-26	NA	185849504	185819927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185820966_185821640_185821757_185832389_185832560_185833859_185834882_185846460_185846561_185849353
ES.2151.4	chr1	-	1312	4	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	558	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.550504807809	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGTGTATAATAATA	NA	False	NA	NA	False	AATAAA	-26	NA	185848927	185819927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185820966_185821640_185821757_185846460_185846561_185848869
ES.2151.5	chr1	-	1528	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	-19	69	-19	-69	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCAATAGCTGTGCATT	NA	False	NA	69	True	AATACA	-14	NA	185849526	185819996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ES.2151.6	chr1	-	2462	6	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	2	-136	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	61.9593415071529	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTACTTACTAAAATGT	NA	False	NA	2	True	AATAAA	-28	NA	185849505	185820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185820966_185821640_185821757_185832389_185832560_185833859_185834882_185846460_185846561_185849353
ES.2151.7	chr1	-	2528	6	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	-3	-146	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	61.9593415071529	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTTTCAGATTTACTT	NA	False	NA	-8	True	AATAAA	-18	NA	185849510	185820073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185820966_185821640_185821757_185832389_185832560_185833788_185834882_185846460_185846561_185849353
ES.2151.8	chr1	-	1392	5	NNC	ENSMUSG00000039246.9	novel	1578	5	NA	NA	3	-151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	56.8968364674171	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACTGACTTTCAGATT	NA	False	NA	-13	True	AATAAA	-13	NA	185849482	185820078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_185820966_185821640_185821757_185832389_185832550_185846460_185846561_185849353
ES.2151.9	chr1	-	3993	3	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	14121	158	14099	-158	3prime_fragment	FALSE	canonical	3	113	junction_2	3	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAATTTACTGACTT	NA	False	NA	-20	True	AATAAA	-6	NA	185835386	185820085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_185820966_185821640_185821757_185832389
ES.21510.1	chr3	-	2858	1	Antisense	novelGene_ENSMUSG00000027794.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55112735	55109877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_55109900_55112700
ES.21511.1	chr3	+	175	1	Intergenic	novelGene_17806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	55312461	55312636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_55312500_55312600
ES.21512.1	chr3	+	177	1	Intergenic	novelGene_17807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAATGGGCTGTAGGT	NA	False	NA	NA	False	NA	NA	NA	55477705	55477882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_55477700_55477900
ES.21513.1	chr3	-	4782	1	Intergenic	novelGene_17808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCACAAAGGAACTCACA	NA	False	NA	NA	False	NA	NA	NA	55515740	55510958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_55511000_55515700
ES.21514.1	chr3	+	156	1	Intergenic	novelGene_17809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCTAGATTTGC	NA	False	NA	NA	False	NA	NA	NA	55703149	55703305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_55703100_55703300
ES.21515.1	chr3	+	136	1	Intergenic	novelGene_17812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56070553	56070689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_56070600_56070700
ES.21516.1	chr3	-	7237	28	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-9059	1	intron_retention	TRUE	canonical	0	0	junction_10	1.94647160644014	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTGTCTCACAAGT	NA	False	NA	-2	True	AATAAA	-14	NA	55884716	55532618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55536015_55537563_55537761_55539388_55539491_55550157_55550329_55551064_55551221_55553358_55553431_55554776_55554970_55557098_55557189_55572994_55573163_55588318_55588472_55598241_55598362_55603702_55603844_55618047_55618161_55625197_55625314_55630559_55630663_55630952_55631071_55693861_55693999_55712657_55712802_55726703_55726829_55761191_55761359_55764380_55764490_55781139_55781205_55799033_55799096_55841933_55842062_55860456_55860584_55862759_55862915_55875332_55875772_55884546
ES.21516.10	chr3	-	7008	29	NIC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-30	20080	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	2.24148046921617	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTAGTTTGATATCTTC	NA	False	NA	NA	False	NA	NA	NA	56091152	55889546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_55891267_55893030_55893200_55895388_55895497_55898458_55898590_55899754_55899936_55907907_55908062_55910144_55910363_55911954_55912972_55915656_55915850_55916637_55916762_55916982_55917065_55926786_55926896_55937303_55937397_55938873_55938972_55939062_55939126_55939911_55939992_55943301_55943471_55944559_55944713_55948274_55948384_55965370_55965505_55966053_55966252_55987279_55987427_55989792_55989913_55992662_55992790_55993583_55993706_55994395_55994492_55994817_55994919_55998309_55998542_56090392
ES.21516.11	chr3	-	5285	23	ISM	ENSMUSG00000027799.13	ENSMUST00000029374.8	10986	58	-30	376789	-30	222	5prime_fragment	FALSE	canonical	2	4	junction_18	1.90529926501224	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCCTCAGACTGGAGC	NA	False	NA	NA	False	AATAAA	-19	NA	56091152	55909404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_55910363_55911954_55912972_55915656_55915850_55916637_55916762_55916982_55917065_55926786_55926896_55937303_55937397_55938873_55938972_55939062_55939126_55939911_55939992_55943301_55943471_55944559_55944713_55948274_55948384_55965370_55965505_55966053_55966252_55987279_55987427_55989792_55989913_55992662_55992790_55993583_55993706_55994395_55994492_55994817_55994919_55998309_55998542_56090392
ES.21516.2	chr3	-	5788	29	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-9079	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.01112974647158	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCACTGATTGTCTCAC	NA	False	NA	-6	True	AATAAA	-10	NA	55884736	55532622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55534416_55535862_55536015_55537563_55537761_55539388_55539491_55550157_55550329_55551064_55551221_55553358_55553431_55554776_55554970_55557098_55557189_55572994_55573163_55588318_55588472_55598241_55598362_55603702_55603844_55618047_55618161_55625197_55625314_55630559_55630663_55630952_55631071_55693861_55693999_55712657_55712802_55726703_55726829_55761191_55761359_55764380_55764490_55781139_55781205_55799033_55799096_55841933_55842062_55860456_55860584_55862777_55862915_55875332_55875772_55884546
ES.21516.3	chr3	-	10972	57	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-43	-29	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.65225164256905	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAAATA	NA	False	NA	-32	True	NA	NA	NA	56091165	55532648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55534416_55535862_55536015_55537563_55537761_55539388_55539491_55550157_55550329_55551064_55551221_55553358_55553431_55554776_55554955_55557098_55557189_55572994_55573163_55588318_55588472_55598241_55598362_55603702_55603844_55618047_55618161_55625197_55625314_55630559_55630663_55630952_55631071_55693861_55693999_55712657_55712802_55726703_55726829_55761191_55761359_55764380_55764490_55781139_55781205_55799033_55799096_55841933_55842062_55860456_55860584_55862759_55862915_55875332_55875772_55891170_55891267_55893030_55893200_55895388_55895497_55898458_55898590_55899754_55899936_55907907_55908062_55910144_55910363_55911954_55912972_55915656_55915850_55916637_55916762_55916982_55917065_55926786_55926896_55937303_55937397_55938873_55938972_55939062_55939126_55939911_55939992_55943301_55943471_55944559_55944713_55948274_55948384_55965370_55965505_55966053_55966252_55987279_55987427_55989792_55989913_55992662_55992790_55993583_55993706_55994395_55994492_55994817_55994919_55998309_55998542_56090392
ES.21516.4	chr3	-	2989	6	NNC	ENSMUSG00000027799.13	novel	3433	13	NA	NA	47337	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.89736659610103	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAAATA	NA	False	NA	-32	True	NA	NA	NA	55551024	55532648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55534416_55535862_55536015_55537563_55537761_55539388_55539491_55550157_55550329_55550424
ES.21516.5	chr3	-	6095	13	NNC	ENSMUSG00000027799.13	novel	4717	2	NA	NA	-9092	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.28977194400568	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGTAATTCACCTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	55884749	55687378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55691613_55693861_55693999_55712657_55712802_55726703_55726829_55761191_55761359_55764380_55764490_55781139_55781205_55799033_55799096_55841933_55842062_55860456_55860584_55862759_55862915_55875332_55875772_55884546
ES.21516.6	chr3	-	179	1	Intergenic	novelGene_17810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTGTTATAAA	NA	False	NA	NA	False	NA	NA	NA	55740525	55740346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_55740300_55740500
ES.21516.7	chr3	-	175	1	Intergenic	novelGene_17811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAC	9092	False	NA	NA	False	NA	NA	NA	55779655	55779480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_55779500_55779700
ES.21516.8	chr3	-	5459	5	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-9047	30850	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.48746859276655	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTTGGATGTCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	55884704	55837481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55842062_55860456_55860584_55862759_55862915_55875332_55875772_55884546
ES.21516.9	chr3	-	1946	2	NNC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	-9074	-5679	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCTAATTGAAGTTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	55884731	55874010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_55875772_55884546
ES.21517.1	chr3	-	694	1	Intergenic	novelGene_17813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAGGATTCAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	56117221	56116527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_56116500_56117200
ES.21518.1	chr3	-	162	1	Intergenic	novelGene_17814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	56381491	56381329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_56381300_56381500
ES.21519.1	chr3	+	135	1	Intergenic	novelGene_17815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAAGTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	57157515	57157650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_57157500_57157600
ES.2152.1	chr1	-	4289	7	NIC	ENSMUSG00000039239.15	novel	5116	7	NA	NA	428	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.06718737290547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGTGTTCTTCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	186437469	186354983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_186357804_186361079_186361234_186362806_186362870_186364654_186364766_186364874_186365008_186381931_186382096_186436625
ES.2152.10	chr1	-	4486	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	0	7	intron_retention	FALSE	canonical	3	1054	junction_2	5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTATTTTAGTTC	NA	False	NA	-23	True	CATAAA	-13	NA	186481522	186453167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_186453744_186468312_186472061_186481360
ES.2152.11	chr1	-	4386	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	-10	11	intron_retention	FALSE	canonical	3	1054	junction_2	5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCCTGCTCAGATCCAT	NA	False	NA	-5	True	ATTAAA	-23	NA	186481532	186453277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_186453744_186468312_186472061_186481360
ES.2152.12	chr1	-	1230	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	-19	110	-19	4	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGCTTCCCTGCTCA	NA	False	NA	-12	True	ATTAAA	-16	NA	186481574	186453284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.13	chr1	-	1158	5	NNC	ENSMUSG00000001305.6	novel	1321	5	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	451.097550425626	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCTGCTTCCCTGCTC	NA	False	NA	-13	True	ATTAAA	-15	NA	186481510	186453285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_186453737_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.14	chr1	-	1150	5	NNC	ENSMUSG00000001305.6	novel	1321	5	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	465.111814513457	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCTGCTTCCCTGCTC	NA	False	NA	-13	True	ATTAAA	-15	NA	186481510	186453285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_186453744_186468312_186468512_186469784_186469883_186471815_186472061_186481360
ES.2152.15	chr1	-	3012	4	FSM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	-1	81	-1	-81	multi-exon	FALSE	canonical	3	1054	junction_3	20.6774165590278	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTGCTGTGGACACA	NA	False	NA	52	True	AGTAAA	-15	NA	186481523	186453369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186453744_186468312_186468512_186469784_186472061_186481360
ES.2152.16	chr1	-	1109	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	0	212	0	-98	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAATTTTCTAGGAT	NA	False	NA	35	True	NA	NA	NA	186481555	186453386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.17	chr1	-	4211	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	0	-154	intron_retention	FALSE	canonical	3	1054	junction_2	5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCTGTTTTTCTAAAA	NA	False	NA	-21	True	ATTAAA	-26	NA	186481522	186453442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_186453744_186468312_186472061_186481360
ES.2152.18	chr1	-	1032	5	NNC	ENSMUSG00000001305.6	novel	1321	5	NA	NA	0	-161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	451.097550425626	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATTTAACCTGTTTT	NA	False	NA	-28	True	ATTAAA	-19	NA	186481522	186453449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_186453763_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.19	chr1	-	313	2	ISM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	12	18609	12	-18609	5prime_fragment	FALSE	canonical	3	1054	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCCTAAAAGCAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	186481510	186471897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_186472061_186481360
ES.2152.2	chr1	-	4390	7	FSM	ENSMUSG00000039239.15	ENSMUST00000045288.14	5116	7	728	-2	439	2	multi-exon	FALSE	canonical	0	0	junction_2	1.06718737290547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTGCTGTGTTCTTCC	NA	False	NA	NA	False	AATAAA	-12	NA	186437458	186354986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186357804_186361079_186361234_186362806_186362985_186364654_186364766_186364874_186365008_186381931_186382096_186436625
ES.2152.3	chr1	-	3073	11	Fusion	ENSMUSG00000039239.15_ENSMUSG00000001305.6	novel	3485	8	NA	NA	10	-7	multi-exon	FALSE	canonical	0	0	junction_2	474.590823762955	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAATTCAATTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	186481512	186356421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_186357804_186361079_186361234_186362806_186362985_186364654_186364766_186364874_186365008_186381931_186382096_186392156_186392399_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.4	chr1	-	3496	1	FSM	ENSMUSG00000102619.2	ENSMUST00000194722.2	1881	1	-2052	437	-2052	-437	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGTGAGTTCTCTAA	NA	False	NA	NA	False	NA	NA	NA	186447347	186443851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186443900_186447300
ES.2152.5	chr1	-	4610	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGGTTTGTTTATC	NA	False	NA	NA	False	NA	NA	NA	186453007	186448397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_186448400_186453000
ES.2152.6	chr1	-	2515	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	45	-1239	12	1239	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTGTATTTCTCTC	NA	False	NA	NA	False	TTTAAA	-17	NA	186481510	186451935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.7	chr1	-	1318	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	31	-28	-2	28	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCAGTGAAGCTGTG	NA	False	NA	-2	True	CATAAA	-34	NA	186481524	186453146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ES.2152.9	chr1	-	749	2	NNC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	20402	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTATTTTAGTTC	NA	False	NA	-23	True	CATAAA	-13	NA	186461120	186453167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_186453744_186460947
ES.21520.1	chr3	-	236	1	Intergenic	novelGene_17816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCTTAAACTTGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	57204938	57204702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_57204700_57204900
ES.21521.1	chr3	+	3100	1	Intergenic	novelGene_17817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGGTCCAAAAAAACTA	9063	False	NA	NA	False	NA	NA	NA	57396397	57399497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_57396400_57399500
ES.21522.1	chr3	-	5460	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-758	-5	-676	5	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTTTCTGTCGTCAT	NA	False	NA	-1	True	AATAAA	-22	NA	57484007	57363064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ES.21522.10	chr3	-	1653	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-24	3068	-24	-2935	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCATTTCTGTGGCA	NA	False	NA	0	True	AATAAA	-22	NA	57483273	57366137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ES.21522.13	chr3	-	1002	1	Intergenic	novelGene_17818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	57435614	57434612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_57434600_57435600
ES.21522.14	chr3	-	5720	1	Antisense	novelGene_ENSMUSG00000083538.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAGAAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	57440650	57434930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_57434900_57440600
ES.21522.15	chr3	-	2400	2	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	106	117167	24	-117167	5prime_fragment	FALSE	canonical	2	7	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTTTTAATGATTG	NA	False	NA	NA	False	AATAAA	-16	NA	57483225	57480369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_57482679_57483134
ES.21522.2	chr3	-	4583	7	FSM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	87	-137	5	4	multi-exon	FALSE	canonical	2	7	junction_6	83.079112229783	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTTTCTGTCGTCA	NA	False	NA	-2	True	AATAAA	-21	NA	57483244	57363065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483134
ES.21522.5	chr3	-	4687	7	NNC	ENSMUSG00000027803.15	novel	4697	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.6387762640266	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGCCTTTGTTTCTGT	NA	False	NA	-7	True	AATAAA	-16	NA	57483247	57363070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483028
ES.21522.7	chr3	-	4585	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-19	131	-19	2	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTATGTTGTACATACA	NA	False	NA	NA	False	AATAAA	-26	NA	57483268	57363200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ES.21522.8	chr3	-	3753	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	6	938	6	-805	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTGTTGTTGTTTTTA	NA	False	NA	NA	False	GATAAA	-13	NA	57483243	57364007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ES.21522.9	chr3	-	2589	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	-2	2110	-2	-1977	multi-exon	FALSE	canonical	3	192	junction_3	19.06494747494	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATCCTAATCCTTTTGC	NA	False	NA	NA	False	AGTAAA	-16	NA	57483251	57365179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ES.21523.1	chr3	+	161	1	Intergenic	novelGene_17819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	57487486	57487647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_57487500_57487600
ES.21524.1	chr3	-	6712	1	FSM	ENSMUSG00000104965.2	ENSMUST00000198535.2	3955	1	-184	-2573	-184	2573	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCTTCAGTGGAAT	6568	False	NA	NA	False	AATAAA	-16	NA	57548442	57541730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57541700_57548400
ES.21524.10	chr3	-	4124	4	NIC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	16	0	intron_retention	FALSE	canonical	3	518	junction_2	12.0277457017791	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCTAGACAGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	57559113	57553779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.11	chr3	-	877	5	NNC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	227.570181482548	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTATTTCTAGACAGTT	NA	False	NA	-12	True	AATAAA	-18	NA	57559128	57553780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57554202_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.14	chr3	-	950	5	NNC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	228.435302657011	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACTATTTCTAGACAGT	NA	False	NA	-13	True	AATAAA	-17	NA	57559117	57553781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57554287_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.2	chr3	-	10426	5	FSM	ENSMUSG00000104965.2_ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	36	-7470	29	4	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACAGTTTTATTTATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57559100	57544299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.3	chr3	-	2458	1	Genic_Genomic	ENSMUSG00000036513.16	novel	NA	NA	NA	NA	4905	3	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCCACC	786	False	NA	NA	False	NA	NA	NA	57554224	57551766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_57551800_57554200
ES.21524.4	chr3	-	2810	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	2	180	2	-180	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGCTCAGCAGTTATG	NA	False	NA	NA	False	NA	NA	NA	57559134	57551949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.5	chr3	-	2161	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	23	808	16	-808	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAACTGTTCTC	NA	False	NA	NA	False	GATAAA	-42	NA	57559113	57552577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.6	chr3	-	1125	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	12	1855	5	155	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTGCTTACATTTGA	NA	False	NA	NA	False	NA	NA	NA	57559124	57553624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.7	chr3	-	1007	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	-17	2002	-17	8	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGACAGTTCAATATTTT	NA	False	NA	-3	True	AATAAA	-27	NA	57559153	57553771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.8	chr3	-	1031	6	NNC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.598530544936	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAGACAGTTCAATAT	NA	False	NA	-6	True	AATAAA	-24	NA	57559116	57553774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57554198_57556179_57556344_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ES.21524.9	chr3	-	1613	4	NIC	ENSMUSG00000036513.16	novel	2992	5	NA	NA	11	1	intron_retention	FALSE	canonical	3	528	junction_3	7.84573486395988	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTTCTAGACAGTTCA	NA	False	NA	-10	True	AATAAA	-20	NA	57559118	57553778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_57554298_57557462_57557637_57558111_57558921_57559007
ES.21525.1	chr3	-	342	1	FSM	ENSMUSG00000104623.2	ENSMUST00000197077.2	477	1	229	-94	229	94	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATATAGTCTTGAACGA	NA	False	NA	NA	False	NA	NA	NA	57625481	57625139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57625100_57625500
ES.21526.1	chr3	+	2189	6	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-3277	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	68.4380011397177	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTTTACTGATCACAT	NA	False	NA	NA	False	AATAAA	-14	NA	57643482	57706655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57705026
ES.21526.10	chr3	+	2035	8	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-13	-296	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	59.0029400858594	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACCAAGTATTGTT	NA	False	NA	14	True	AATAAA	-14	NA	57643520	57742244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57727927_57728022_57740384_57740466_57740906
ES.21526.11	chr3	+	2649	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCTTTGTTGAGTTT	NA	False	NA	NA	False	AAGAAA	-41	NA	57643520	57742651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.12	chr3	+	2249	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-13	-289	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643520	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.13	chr3	+	1078	9	NIC	ENSMUSG00000036503.14	novel	1062	9	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	46.8119576070046	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAGTCTCTTCATACAA	NA	False	NA	NA	False	AATAAA	-19	NA	57643530	57740649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384
ES.21526.14	chr3	+	3313	10	NIC	ENSMUSG00000036503.14	novel	3244	10	NA	NA	-3	-49	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	52.633838807884	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATTTTAATTTTGA	NA	False	NA	NA	False	AATATA	-9	NA	57643537	57742603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709138_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.15	chr3	+	1927	7	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-286	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	54.7834119257118	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTGTTCTGGTGAACT	NA	False	NA	24	True	AATAAA	-24	NA	57643540	57742254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.17	chr3	+	3364	12	NNC	ENSMUSG00000036503.14	novel	3244	10	NA	NA	2	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.4556163648995	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643542	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57655311_57655456_57669366_57669631_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709138_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.18	chr3	+	2755	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTGTTTCTTTGTTGA	NA	False	NA	NA	False	AAGAAA	-37	NA	57643544	57742647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.2	chr3	+	2276	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	1	401	0	-289	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643483	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.3	chr3	+	2356	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-4	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.4980164964108	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643491	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57652540_57652629_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.4	chr3	+	3006	10	NIC	ENSMUSG00000036503.14	novel	3244	10	NA	NA	-3	-289	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	52.633838807884	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643492	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709138_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.5	chr3	+	2185	10	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-296	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.9574986303946	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACCAAGTATTGTT	NA	False	NA	14	True	AATAAA	-14	NA	57643495	57742244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57671677_57671732_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.6	chr3	+	2616	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	13	49	0	-49	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATTTTAATTTTGA	NA	False	NA	NA	False	AATATA	-9	NA	57643495	57742603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.7	chr3	+	2132	9	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	-1	-289	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	51.073476482417	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTATTGTTCTGGTGA	NA	False	NA	21	True	AATAAA	-21	NA	57643501	57742251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.8	chr3	+	2393	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	1	-296	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACCAAGTATTGTT	NA	False	NA	14	True	AATAAA	-14	NA	57643503	57742244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ES.21526.9	chr3	+	1082	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	-25	5	10	-5	multi-exon	FALSE	canonical	3	113	junction_8	24.8281594162757	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATAGTCTCTTCATACA	NA	False	NA	NA	False	AATAAA	-18	NA	57643515	57740648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
ES.21527.1	chr3	-	3620	1	Intergenic	novelGene_17820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAAGTGAAC	1409	False	NA	NA	False	NA	NA	NA	57650288	57646668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_57646700_57650300
ES.21528.1	chr3	-	172	1	Intergenic	novelGene_17821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAGAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	57678656	57678484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_57678500_57678700
ES.21529.1	chr3	-	2427	1	Antisense	novelGene_ENSMUSG00000036503.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	AATACA	-8	NA	57727999	57725572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_57725600_57728000
ES.2153.1	chr1	-	159	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	186506419	186506260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_186506300_186506400
ES.21530.1	chr3	-	1819	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	519	4	-11	-4	multi-exon	FALSE	canonical	3	22	junction_1	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTGGACTCCTGTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	57754981	57749319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57750736_57752594_57752788_57754771
ES.21530.2	chr3	-	3884	2	FSM	ENSMUSG00000027805.17	ENSMUST00000120289.3	905	2	-220	-2759	-220	3	multi-exon	FALSE	canonical	3	36	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTGGACTCCTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	57755190	57749322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_57752788_57754771
ES.21530.3	chr3	-	5880	1	NIC	ENSMUSG00000027805.17	novel	2342	3	NA	NA	-232	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTGGACTCCTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	57755202	57749322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_57749300_57755200
ES.21530.4	chr3	-	1771	3	NNC	ENSMUSG00000027805.17	novel	2342	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	False	NA	-6	True	AATAAA	-13	NA	57754984	57749325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57750736_57752639_57752788_57754771
ES.21530.5	chr3	-	1477	3	NNC	ENSMUSG00000027805.17	novel	2342	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	False	NA	-6	True	AATAAA	-13	NA	57754957	57749325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_57750469_57752639_57752788_57754771
ES.21531.1	chr3	-	1737	1	FSM	ENSMUSG00000069008.4	ENSMUST00000091117.4	1252	1	-47	-438	-47	438	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTCACCTAAGGAATA	NA	False	NA	NA	False	NA	NA	NA	58011715	58009978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58010000_58011700
ES.21532.1	chr3	+	179	1	Intergenic	novelGene_17822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAAAGTGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	58076919	58077098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58076900_58077100
ES.21533.1	chr3	-	2245	1	Intergenic	novelGene_17823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGAATTTTATACTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	58322088	58319843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58319800_58322100
ES.21534.1	chr3	+	4693	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-34	0	-29	0	multi-exon	FALSE	canonical	3	95	junction_1	10.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322106	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58366751_58366804_58367428
ES.21534.10	chr3	+	4206	1	FSM	ENSMUSG00000027806.10	ENSMUST00000199784.2	3022	1	-1157	-27	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTTCATGAGCAACTCA	NA	False	NA	NA	False	NA	NA	NA	58322141	58326347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58322100_58326300
ES.21534.11	chr3	+	3762	4	NNC	ENSMUSG00000027806.10	novel	9799	4	NA	NA	1	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4667107001129	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAGAATGGTGAGCAAT	NA	False	NA	NA	False	AGTAAA	-13	NA	58322141	58369273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58323303_58324330_58325035_58366751_58366804_58367428
ES.21534.12	chr3	+	4886	5	FSM	ENSMUSG00000027806.10	ENSMUST00000196049.2	715	5	-2760	-1411	4	0	multi-exon	FALSE	canonical	0	0	junction_2	45.453272709454	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322144	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58335648_58335721_58344737_58344897_58366751_58366804_58367428
ES.21534.13	chr3	+	4526	4	NIC	ENSMUSG00000027806.10	novel	715	5	NA	NA	5	-287	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAATGAAGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	58322145	58368854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
ES.21534.14	chr3	+	4374	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	30	5395	25	-332	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGTGGAGCTGAGCT	NA	False	NA	NA	False	AATAAA	-15	NA	58322165	58368809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
ES.21534.15	chr3	+	4189	4	NNC	ENSMUSG00000027806.10	novel	9799	4	NA	NA	66	135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.4667107001129	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATGGTGAGCAATATT	NA	False	NA	NA	False	AGTAAA	-16	NA	58322206	58369276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58323990_58324528_58325035_58366751_58366804_58367428
ES.21534.16	chr3	+	3868	5	NNC	ENSMUSG00000027806.10	novel	715	5	NA	NA	99	-167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.5756679336919	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCAGTGTATACTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	58322239	58368974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58323393_58323989_58325035_58335648_58335721_58366751_58366804_58367428
ES.21534.17	chr3	+	5014	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	110	-465	110	465	multi-exon	FALSE	canonical	3	95	junction_1	10.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGTAATGTTAGAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	58322250	58369606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58366751_58366804_58367428
ES.21534.18	chr3	+	3080	4	NNC	ENSMUSG00000027806.10	novel	4659	3	NA	NA	-355	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.4667107001129	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322943	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58323264_58324039_58325035_58366751_58366804_58367428
ES.21534.19	chr3	+	2232	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	2631	4936	-138	127	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACACAAGAATGGTGA	NA	False	NA	NA	False	AGTAAA	-8	NA	58324766	58369268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
ES.21534.2	chr3	+	4763	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	-27	5063	-27	0	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322108	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
ES.21534.20	chr3	+	6511	3	ISM	ENSMUSG00000027806.10	ENSMUST00000196049.2	715	5	15246	-1411	15246	0	3prime_fragment	FALSE	canonical	2	10	junction_1	53	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58340150	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58344897_58366751_58366804_58367428
ES.21534.21	chr3	+	1041	1	Intergenic	novelGene_17824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTTTTTGTTTCTTCA	NA	False	NA	NA	False	AATAAA	-28	NA	58344897	58345938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58344900_58345900
ES.21534.22	chr3	+	2928	1	Intergenic	novelGene_17826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTACCTTGAGGTG	NA	False	NA	NA	False	GATAAA	-3	NA	58360510	58363438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58360500_58363400
ES.21534.23	chr3	+	6446	2	ISM	ENSMUSG00000027806.10	ENSMUST00000196049.2	715	5	37296	-1541	37296	130	3prime_fragment	FALSE	canonical	3	116	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACAAGAATGGTGAGCA	NA	False	NA	NA	False	AGTAAA	-11	NA	58362200	58369271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58366804_58367428
ES.21534.24	chr3	+	3081	2	ISM	ENSMUSG00000027806.10	ENSMUST00000196049.2	715	5	40528	-1408	40528	-3	3prime_fragment	FALSE	canonical	3	116	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	NA	False	NA	15	True	ATTAAA	-15	NA	58365432	58369138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58366804_58367428
ES.21534.25	chr3	+	6289	1	ISM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	45780	0	43011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAAGTGTTTTCTTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	58367915	58374204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58367900_58374200
ES.21534.3	chr3	+	4834	4	NIC	ENSMUSG00000027806.10	novel	715	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322124	58369141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
ES.21534.4	chr3	+	4809	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-15	-135	-10	135	multi-exon	FALSE	canonical	3	95	junction_1	10.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATGGTGAGCAATATT	NA	False	NA	NA	False	AGTAAA	-16	NA	58322125	58369276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58366751_58366804_58367428
ES.21534.5	chr3	+	4343	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-15	331	-10	-331	multi-exon	FALSE	canonical	3	95	junction_1	10.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGGTGGAGCTGAGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	58322125	58368810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58366751_58366804_58367428
ES.21534.6	chr3	+	4082	4	NNC	ENSMUSG00000027806.10	novel	9799	4	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.4667107001129	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	NA	False	NA	15	True	ATTAAA	-15	NA	58322130	58369138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58323396_58323979_58325035_58366751_58366804_58367428
ES.21534.7	chr3	+	4546	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	-2	115	-2	-115	multi-exon	FALSE	canonical	3	95	junction_1	10.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAAGAGAAAGCATCAT	NA	False	NA	-97	True	ATTAAA	-21	NA	58322138	58369026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58366751_58366804_58367428
ES.21534.8	chr3	+	4696	4	NIC	ENSMUSG00000027806.10	novel	715	5	NA	NA	0	-122	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACAGTTTCAAGAGAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	58322140	58369019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
ES.21534.9	chr3	+	4609	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	5	5185	0	-122	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACAGTTTCAAGAGAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	58322140	58369019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
ES.21535.1	chr3	-	171	1	Intergenic	novelGene_17825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58352619	58352448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58352400_58352600
ES.21536.1	chr3	+	177	1	Intergenic	novelGene_17827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	58383629	58383806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58383600_58383800
ES.21537.1	chr3	-	173	1	Intergenic	novelGene_17828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATAGAGTGAGAGGGG	NA	False	NA	NA	False	NA	NA	NA	58400627	58400454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58400500_58400600
ES.21538.1	chr3	+	170	1	Intergenic	novelGene_17829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATATTTTAGACAAT	3113	False	NA	NA	False	NA	NA	NA	58418433	58418603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58418400_58418600
ES.21539.1	chr3	+	1959	6	ISM	ENSMUSG00000027810.15	ENSMUST00000137469.8	1035	9	-224	2864	-3	-2652	5prime_fragment	FALSE	canonical	3	689	junction_1	57.531208921767	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGGCCAGCAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	58433238	58450380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054
ES.21539.10	chr3	+	2098	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	286.702740723666	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCAAGTTTG	NA	False	NA	3	True	AATAAA	-14	NA	58433430	58464920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438511_58438578_58444954_58445030_58446948_58447068_58448466_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.14	chr3	+	1799	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	216.799637546368	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456108_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.15	chr3	+	1954	13	FSM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	-13	4	0	-4	multi-exon	FALSE	canonical	2	16	junction_3	220.750408958977	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTGCCTTCAAGTT	NA	False	NA	1	True	AATAAA	-12	NA	58433463	58464918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.18	chr3	+	2068	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	212.365627546723	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433463	58464922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444963_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.19	chr3	+	2010	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	214.724152201054	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCAAGTTTG	NA	False	NA	3	True	AATAAA	-14	NA	58433463	58464920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452724_58452915_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.2	chr3	+	2313	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	-3	-11	-3	11	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCAGTTAAAAGTT	NA	False	NA	16	True	AATAAA	-27	NA	58433238	58464933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.20	chr3	+	1978	13	NIC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	-4	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	221.022796084225	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGACATTTTAAATTTG	NA	False	NA	-15	True	TTTAAA	-29	NA	58433472	58464902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58433508_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.21	chr3	+	1426	6	ISM	ENSMUSG00000027810.15	ENSMUST00000137469.8	1035	9	26	3147	12	-2935	5prime_fragment	FALSE	canonical	3	689	junction_1	57.531208921767	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCTGAAATTGTCATA	NA	False	NA	NA	False	TTTAAA	-4	NA	58433488	58450097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054
ES.21539.22	chr3	+	4030	2	ISM	ENSMUSG00000027810.15	ENSMUST00000138848.2	913	9	11989	1897	-4988	-1897	intron_retention	FALSE	canonical	3	763	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTTTTCTTTGGTAT	NA	False	NA	NA	False	NA	NA	NA	58445712	58451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58447068_58448460
ES.21539.23	chr3	+	2827	8	ISM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	17698	0	474	0	3prime_fragment	FALSE	canonical	3	708	junction_7	59.7351296498611	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58451174	58464922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.24	chr3	+	5558	3	ISM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	19508	0	1331	0	intron_retention	FALSE	canonical	3	729	junction_2	23.5	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58452984	58464922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58453038_58455813_58456386_58459989
ES.21539.25	chr3	+	251	1	Intergenic	novelGene_17830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	58454288	58454539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58454300_58454500
ES.21539.26	chr3	+	2717	1	Genic_Genomic	ENSMUSG00000027810.15	novel	NA	NA	NA	NA	11302	750	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAGGGAGTCAGATCT	1837	False	NA	NA	False	NA	NA	NA	58462955	58465672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_58463000_58465700
ES.21539.3	chr3	+	2712	6	ISM	ENSMUSG00000027810.15	ENSMUST00000137469.8	1035	9	-220	2107	1	-1895	5prime_fragment	FALSE	canonical	3	689	junction_1	57.531208921767	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTTCTTTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	58433242	58451137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054
ES.21539.5	chr3	+	3689	1	FSM	ENSMUSG00000106553.2	ENSMUST00000199552.2	1192	1	-1103	-1394	-1103	1394	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAAACTTAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	58433247	58436936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58433200_58436900
ES.21539.6	chr3	+	1852	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	9	-81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	216.799637546368	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTGACAGACATTTG	NA	False	NA	13	True	AATAAA	-28	NA	58433250	58464841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456029_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.7	chr3	+	2211	6	NNC	ENSMUSG00000027810.15	novel	1035	9	NA	NA	88	-3548	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	307.995844127806	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTGATTAATTTTTA	NA	False	NA	NA	False	AATATA	-28	NA	58433329	58449484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444954_58446269_58446948_58447068_58448460_58448561_58449054
ES.21539.8	chr3	+	2148	14	NNC	ENSMUSG00000027810.15	novel	2299	14	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	216.019586006597	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433379	58464922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453025_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.21539.9	chr3	+	2053	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	156	90	-65	-90	multi-exon	FALSE	canonical	3	611	junction_6	73.3195163601748	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGCTTAATAAATTGAC	NA	False	NA	4	True	AATAAA	-19	NA	58433397	58464832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ES.2154.1	chr1	+	3514	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	-28	-274	-28	274	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGTTTTTTGTTTTGT	NA	False	NA	8	True	NA	NA	NA	186699584	186703098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186699600_186703100
ES.2154.2	chr1	+	2829	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	22	361	22	-361	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGGTATTTGTTATGG	NA	False	NA	NA	False	AATAAA	-29	NA	186699634	186702463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186699600_186702500
ES.2154.3	chr1	+	3187	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	25	0	25	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAGAAATGGTCTATAT	NA	False	NA	NA	False	NA	NA	NA	186699637	186702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186699600_186702800
ES.21540.1	chr3	-	4459	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	145	7	145	-7	multi-exon	FALSE	canonical	3	847	junction_1	36.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTATTAGGAACTG	NA	False	NA	NA	False	AATAAA	-10	NA	58433168	58427244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58431290_58432503_58432580_58432830
ES.21540.2	chr3	-	4365	2	NIC	ENSMUSG00000027808.9	novel	4611	3	NA	NA	139	-1321	intron_retention	FALSE	canonical	3	920	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAATAATACCGAGA	NA	False	NA	NA	False	NA	NA	NA	58433174	58428558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_58432580_58432830
ES.21540.3	chr3	-	2532	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	-73	2152	-73	-2152	multi-exon	FALSE	canonical	3	847	junction_1	36.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	18	True	AATAAA	-36	NA	58433386	58429389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58431290_58432503_58432580_58432830
ES.21540.4	chr3	-	3650	2	NIC	ENSMUSG00000027808.9	novel	4611	3	NA	NA	23	-2152	intron_retention	FALSE	canonical	3	920	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGCAGAGTTTTTAT	NA	False	NA	18	True	AATAAA	-36	NA	58433290	58429389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_58432580_58432830
ES.21540.5	chr3	-	2417	3	NNC	ENSMUSG00000027808.9	novel	4611	3	NA	NA	2	-2161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	423.5	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAATGATTTTGCAG	NA	False	NA	9	True	AATAAA	-27	NA	58433311	58429398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_58431290_58432503_58432580_58432861
ES.21540.6	chr3	-	3889	1	NIC	ENSMUSG00000027808.9	novel	4611	3	NA	NA	15	-2172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCTGTTGTAAAAGAAAA	NA	False	NA	-2	True	AATAAA	-16	NA	58433298	58429409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_58429400_58433300
ES.21540.7	chr3	-	862	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	-8	3757	-8	-3757	multi-exon	FALSE	canonical	3	847	junction_1	36.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTATTCAGTACAGAAT	NA	False	NA	0	True	AATAAA	-38	NA	58433321	58430994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58431290_58432503_58432580_58432830
ES.21540.8	chr3	-	564	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	141	3906	141	-3906	multi-exon	FALSE	canonical	3	847	junction_1	36.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGACTTTTCATATCC	NA	False	NA	-9	True	AGTAAA	-12	NA	58433172	58431143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58431290_58432503_58432580_58432830
ES.21541.1	chr3	-	177	1	Intergenic	novelGene_17831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATTAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	58461061	58460884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58460900_58461100
ES.21542.1	chr3	-	156	1	Intergenic	novelGene_17832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	58465793	58465637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58465600_58465800
ES.21543.1	chr3	-	549	2	Intergenic	novelGene_17833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAATTAACTA	NA	False	NA	NA	False	NA	NA	NA	58484025	58482192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58482581_58483864
ES.21543.2	chr3	-	1820	1	Intergenic	novelGene_17834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTCCAATAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	58484020	58482200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58482200_58484000
ES.21544.1	chr3	+	3178	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	-19	-2	-19	2	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTTTGTGAAAATGAT	NA	False	NA	17	True	AATAAA	-20	NA	58484037	58500556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ES.21544.2	chr3	+	1136	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	17	2004	17	-2004	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGCCATGGTTAATAC	NA	False	NA	NA	False	NA	NA	NA	58484073	58498550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ES.21544.3	chr3	+	1748	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	30	1379	30	-1379	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGTTCCAGAGTTCT	NA	False	NA	3	True	ATTAAA	-17	NA	58484086	58499175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ES.21544.4	chr3	+	2963	7	NNC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.1877308260512	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCTTTGTGAAAATG	NA	False	NA	15	True	AATAAA	-18	NA	58484114	58500554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115_58499945_58500080
ES.21544.5	chr3	+	3505	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	61	-409	-1	409	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGCCAATACTTAACT	NA	False	NA	1	True	AATAAA	-16	NA	58484117	58500963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ES.21544.6	chr3	+	903	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	61	2193	-1	2128	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTTCTTGGTCATGT	NA	False	NA	NA	False	NA	NA	NA	58484117	58498361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ES.21544.7	chr3	+	3481	1	NIC	ENSMUSG00000075700.11	novel	3157	6	NA	NA	9640	1006	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCCTTTCTACTTCCA	NA	False	NA	NA	False	NA	NA	NA	58493758	58497239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58493800_58497200
ES.21544.8	chr3	+	2128	1	Genic_Genomic	ENSMUSG00000075700.11	novel	NA	NA	NA	NA	14593	285	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAAGTTTTCCTGAGAA	NA	False	NA	NA	False	CATAAA	-21	NA	58498711	58500839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_58498700_58500800
ES.21545.1	chr3	+	171	1	Intergenic	novelGene_17837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAGTTTGAAAAAA	189	False	NA	NA	False	NA	NA	NA	58502371	58502542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58502400_58502500
ES.21546.1	chr3	+	151	1	Intergenic	novelGene_17839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAAATTATGCTTTT	1748	False	NA	NA	False	NA	NA	NA	58503930	58504081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58503900_58504100
ES.21547.1	chr3	+	5952	1	Intergenic	novelGene_17840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2709	False	NA	NA	False	NA	NA	NA	58504891	58510843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58504900_58510800
ES.21548.1	chr3	-	2673	1	Intergenic	novelGene_17835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	58490978	58488305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58488300_58491000
ES.21549.1	chr3	-	4063	1	Antisense	novelGene_ENSMUSG00000075700.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATCCCGTGTATTAT	NA	False	NA	NA	False	NA	NA	NA	58496974	58492911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_58492900_58497000
ES.21549.2	chr3	-	174	2	Intergenic	novelGene_17836	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58556456	58492937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58493081_58556425
ES.21549.3	chr3	-	4781	1	Intergenic	novelGene_17838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGACTGAGGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	58507900	58503119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58503100_58507900
ES.2155.1	chr1	+	4791	10	NNC	ENSMUSG00000039210.17	novel	3704	9	NA	NA	-178	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.6693120329882	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGTTGTTGGTGTGTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	186947526	187083900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947661_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.10	chr1	+	6741	7	Fusion	ENSMUSG00000039210.17_ENSMUSG00000104394.3	novel	2411	6	NA	NA	1	2	multi-exon	TRUE	non_canonical	0	0	junction_6	37.1098220002318	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGTCTTTATTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	186947705	186972556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966828_186971342_186971538
ES.2155.11	chr1	+	4692	9	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	26.4752242672277	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947705	187083901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958405_186965387_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.12	chr1	+	6002	6	FSM	ENSMUSG00000039210.17_ENSMUSG00000104394.3	ENSMUST00000044812.12	1639	6	-35	-4328	1	-1612	multi-exon	FALSE	canonical	2	6	junction_5	31.740195336513	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGGAGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	186947705	186970942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
ES.2155.13	chr1	+	3847	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	-1	701	-1	3	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGGTGCCCACATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	186947706	187082923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.14	chr1	+	4749	9	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	27.6741643956959	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCCGTTGTTGGTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	186947707	187083897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187073683_187073773_187080553
ES.2155.15	chr1	+	4979	12	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.3804357875164	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAAAGCCGTTGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	186947718	187083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186961795_186961858_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187052360_187052474_187054480_187054552_187073683_187073773_187080553
ES.2155.16	chr1	+	4560	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	11	-24	0	24	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAACATTTCCAATTGG	NA	False	NA	NA	False	NA	NA	NA	186947718	187083648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.17	chr1	+	4677	8	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.8886908171608	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCGTTGTTGGTGTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	186947718	187083898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187073683_187073773_187080553
ES.2155.18	chr1	+	4929	11	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.3888869830379	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGCCGTTGTTGGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	186947718	187083895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187051006_187051129_187054480_187054552_187073683_187073773_187080553
ES.2155.19	chr1	+	1929	6	ISM	ENSMUSG00000039210.17	ENSMUST00000160481.8	2880	11	11	44579	0	18	5prime_fragment	FALSE	canonical	3	75	junction_2	5.88557558782486	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAAGATCTGCTTTAA	NA	False	NA	NA	False	NA	NA	NA	186947718	187037258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526
ES.2155.2	chr1	+	5254	6	NNC	ENSMUSG00000039210.17	novel	3704	9	NA	NA	-142	2914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.2967361533591	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGGAGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	186947562	186970942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947661_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966828
ES.2155.20	chr1	+	4773	9	NIC	ENSMUSG00000039210.17	novel	4702	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	27.9885579299827	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947718	187083901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187054480_187054552_187073683_187073773_187080553
ES.2155.21	chr1	+	2755	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	12	1780	1	7	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAATGGCTCCTTTGCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	186947719	187081844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.22	chr1	+	4648	8	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	29.5434650393384	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCCGTTGTTGGTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	186947719	187083897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187080553
ES.2155.23	chr1	+	4263	10	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-22220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.8809515709393	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTAAGCAGCTGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	186947719	187059617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186961795_186961858_186962980_186963043_186965327_186965515_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187056795
ES.2155.25	chr1	+	4116	10	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.3902338838526	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947719	187083901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073738_187081214
ES.2155.26	chr1	+	3740	10	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-5851	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.8591855254146	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	186947719	187075986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186961795_186961858_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683
ES.2155.27	chr1	+	3954	11	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.3888869830379	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCATGGTGCCCACATC	NA	False	NA	NA	False	AATAAA	-18	NA	186947719	187082921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187051006_187051129_187054480_187054552_187073683_187073773_187080553
ES.2155.28	chr1	+	6140	9	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-22222	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	27.0135961138091	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCTCTAAGCAGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	186947719	187059615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187054850
ES.2155.29	chr1	+	5805	5	Fusion	ENSMUSG00000039210.17_ENSMUSG00000104394.3	novel	1639	6	NA	NA	1	-1612	multi-exon	FALSE	canonical	2	2	junction_3	38.4732049613754	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGGAGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	186947719	186970942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_186947874_186957699_186958417_186962980_186963043_186965943_186966024_186966150
ES.2155.3	chr1	+	4837	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	-12	-278	-9	1	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGTTGGTGTGTTTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	186947695	187083902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.30	chr1	+	4027	10	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-21238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.1409261737556	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTCCTCTCAGTGTAG	NA	False	NA	NA	False	AATAAA	-11	NA	186947719	187060599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187056795_187056925_187058076
ES.2155.32	chr1	+	4701	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	1	0	1	0	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947719	187083901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ES.2155.33	chr1	+	3552	7	ISM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	12	7919	-4	-5855	5prime_fragment	FALSE	canonical	3	14	junction_6	26.7810048770061	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186947730	187075982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683
ES.2155.34	chr1	+	3579	6	NIC	ENSMUSG00000039210.17	novel	4702	8	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	40.5048145286459	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGGTGCCCACATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	186947733	187082923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186965327_186965511_186965943_186966024_187073683_187073773_187080553
ES.2155.35	chr1	+	3703	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	18	981	2	0	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCATGGTGCCCACAT	NA	False	NA	NA	False	AATAAA	-17	NA	186947736	187082920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ES.2155.36	chr1	+	4854	11	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.4007715957506	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAAAGCCGTTGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	186947741	187083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187070956_187071030_187073683_187073773_187080553
ES.2155.37	chr1	+	3578	8	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	4	-5884	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.9087046233182	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186947746	187075953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187054480_187054552_187073683
ES.2155.38	chr1	+	2652	9	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	27.6741643956959	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTAGAATGGCTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	186947746	187081839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187073683_187073773_187080553
ES.2155.39	chr1	+	3021	6	FSM	ENSMUSG00000039210.17	ENSMUST00000044812.12	1639	6	11	-1393	9	-21	multi-exon	FALSE	canonical	2	6	junction_5	31.740195336513	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGATTTTCAGTTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	186947751	186968007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
ES.2155.4	chr1	+	5324	2	ISM	ENSMUSG00000039210.17	ENSMUST00000159748.8	1374	6	-38	3244	0	-3244	5prime_fragment	FALSE	canonical	3	86	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATTTTCTCTCAGACCT	NA	False	NA	NA	False	NA	NA	NA	186947704	186962854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_186947874_186957699
ES.2155.40	chr1	+	4529	7	NNC	ENSMUSG00000039210.17	novel	4702	8	NA	NA	20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.8680078116516	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGTGTTTCTGTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	186947762	187083906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958411_186965393_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ES.2155.41	chr1	+	6004	7	ISM	ENSMUSG00000039210.17	ENSMUST00000160570.2	3704	9	-396	24009	-396	-22222	5prime_fragment	FALSE	canonical	3	68	junction_6	8.70663859107265	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCTCTAAGCAGCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	186957980	187059615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480
ES.2155.43	chr1	+	2440	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTTGTCACTTGAAAC	NA	False	NA	NA	False	TATAAA	-13	NA	187058977	187061417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_187059000_187061400
ES.2155.44	chr1	+	2993	1	NIC	ENSMUSG00000039210.17	novel	2880	11	NA	NA	114617	-5851	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	187072993	187075986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_187073000_187076000
ES.2155.45	chr1	+	6245	1	Genic_Genomic	ENSMUSG00000039210.17	novel	NA	NA	NA	NA	119283	3	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTGTGTTTCTGTC	NA	False	NA	NA	False	AATAAA	-29	NA	187077659	187083904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_187077700_187083900
ES.2155.5	chr1	+	9380	8	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	-5884	intron_retention	FALSE	canonical	3	57	junction_7	11.1208574034449	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186947704	187075953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187054552_187073683
ES.2155.6	chr1	+	3712	9	NNC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	26.4752242672277	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCATGGTGCCCACAT	NA	False	NA	NA	False	AATAAA	-17	NA	186947704	187082920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_186947874_186957699_186958405_186965387_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.2155.7	chr1	+	5325	6	FSM	ENSMUSG00000039210.17_ENSMUSG00000104394.3	ENSMUST00000097443.10	2411	6	0	-2914	0	-1612	multi-exon	FALSE	canonical	2	13	junction_5	28.9924128005932	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGGAGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	186947704	186970942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966828
ES.2155.8	chr1	+	4387	5	NIC	ENSMUSG00000039210.17	novel	4702	8	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.5633238041666	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCGTTGTTGGTGTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	186947705	187083898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_187036526_187036595_187073683_187073773_187080553
ES.2155.9	chr1	+	4885	11	NIC	ENSMUSG00000039210.17	novel	4547	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	32.1665975819638	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCGTTGTTGGTGTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	186947705	187083898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_186947874_186957699_186958417_186961795_186961858_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ES.21550.1	chr3	-	5741	3	NNC	ENSMUSG00000036432.9	novel	2511	2	NA	NA	315	3372	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGCTCCTTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	58599506	58578986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_58583865_58592970_58593144_58598816
ES.21550.2	chr3	-	2561	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	-50	0	-50	0	multi-exon	FALSE	canonical	3	158	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTGCTTGAATCGTAT	NA	False	NA	0	True	AATAAA	-30	NA	58599871	58582358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58583865_58598816
ES.21550.3	chr3	-	1449	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	299	763	299	475	multi-exon	FALSE	canonical	3	158	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCGGAGTTGGCCTGTT	NA	False	NA	84	True	NA	NA	NA	58599522	58583121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58583865_58598816
ES.21550.4	chr3	-	1802	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	-163	872	-163	366	multi-exon	FALSE	canonical	3	158	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTATTCAGTACATCT	NA	False	NA	-25	True	AATAAA	-14	NA	58599984	58583230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_58583865_58598816
ES.21551.1	chr3	-	206	1	Intergenic	novelGene_17841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGACCTCATCC	NA	False	NA	NA	False	NA	NA	NA	58609918	58609712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58609700_58609900
ES.21552.1	chr3	+	208	1	Intergenic	novelGene_17842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCAGTTACTTAACATGA	NA	False	NA	NA	False	NA	NA	NA	58855392	58855600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58855400_58855600
ES.21553.1	chr3	+	176	1	Intergenic	novelGene_17843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	58887022	58887198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58887000_58887200
ES.21554.1	chr3	+	7026	46	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	7	-1086	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_38	4.40112219135187	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGACGTCTCCTTTGGTC	NA	False	NA	NA	False	AAAACA	-24	NA	58913252	59222237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58913494_58914294_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000114_59000220_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152176_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172710_59174545_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.10	chr3	+	6956	40	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	225	-19097	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	3.75761335419946	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGCAGACACATTAG	NA	False	NA	NA	False	NA	NA	NA	58914132	59204226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152176_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425
ES.21554.11	chr3	+	10432	44	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	234	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	4.33794182977948	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	NA	False	NA	NA	False	ATTAAA	-9	NA	58914141	59225831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168263_59169298_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.12	chr3	+	10446	45	NIC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	-170	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_21	4.25309804439148	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	NA	False	NA	NA	False	ATTAAA	-9	NA	58914228	59225831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000114_59000220_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.13	chr3	+	10212	44	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	-107	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.16791940785486	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58914291	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975738_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.14	chr3	+	2885	1	Intergenic	novelGene_17844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAGGGGGTGTGGACA	NA	False	NA	NA	False	NA	NA	NA	58926319	58929204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_58926300_58929200
ES.21554.15	chr3	+	8975	36	ISM	ENSMUSG00000056476.14	ENSMUST00000199659.5	11006	44	70205	262	69714	10	3prime_fragment	FALSE	canonical	2	2	junction_12	4.25838907933744	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58984112	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000114_59000220_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.16	chr3	+	3364	22	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	84452	-53343	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	4.6442610819949	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGATTTTAAAAATGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	58998850	59169980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58999043_59000114_59000220_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152176_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630
ES.21554.17	chr3	+	8360	32	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	84552	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.65880612450478	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58998950	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58999043_59000114_59000220_59000932_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.18	chr3	+	4146	1	Intergenic	novelGene_17847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTTGTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	59031834	59035980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_59031800_59036000
ES.21554.19	chr3	+	2817	1	Antisense	novelGene_ENSMUSG00000036381.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAAAAACTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	59057304	59060121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_59057300_59060100
ES.21554.2	chr3	+	10518	45	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	12	10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	3.72581734335341	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58913257	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58913494_58914294_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152176_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.21	chr3	+	7705	27	ISM	ENSMUSG00000056476.14	ENSMUST00000199659.5	11006	44	226637	272	-23938	0	3prime_fragment	FALSE	canonical	2	2	junction_3	4.10512740434656	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	8238	False	NA	NA	False	ATTAAA	-9	NA	59140544	59225831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.22	chr3	+	5719	15	NIC	ENSMUSG00000056476.14	novel	10159	43	NA	NA	-1085	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	4.46357137141943	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	NA	False	NA	NA	False	ATTAAA	-9	NA	59163397	59225831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59208700_59208797_59220273_59220356_59222117
ES.21554.3	chr3	+	9969	42	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	27	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	5.17487178941496	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58913272	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58913494_58914294_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140033_59140070_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59220273_59220356_59222117
ES.21554.4	chr3	+	5512	18	NNC	ENSMUSG00000056476.14	novel	3747	16	NA	NA	48	21275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.93855504194069	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAAGATTGTGAATCAT	NA	False	NA	NA	False	CATAAA	-12	NA	58913293	59023584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58913494_58914294_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58977823_58979214_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000114_59000220_59000939_59001117_59022694
ES.21554.6	chr3	+	10445	43	NIC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	194	10	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	4.1436780795823	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58914101	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_58914522_58938966_58939072_58944980_58945173_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.7	chr3	+	3383	16	NNC	ENSMUSG00000056476.14	novel	3747	16	NA	NA	202	21277	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	4.54899256246186	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGATTGTGAATCATTT	NA	False	NA	NA	False	CATAAA	-14	NA	58914109	59023586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000939_59001117_59022694
ES.21554.8	chr3	+	10458	44	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	202	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.3176972409579	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGTCTGCAGAT	NA	False	NA	NA	False	ATTAAA	-9	NA	58914109	59225831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58946586_58946620_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993697_58993823_58998827_58999043_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165602_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21554.9	chr3	+	10519	44	NNC	ENSMUSG00000056476.14	novel	11006	44	NA	NA	210	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	4.61989489928894	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGATGTTGGCTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	58914117	59225841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_58914522_58938966_58939072_58944980_58945173_58949674_58949835_58975662_58975833_58979235_58979347_58980505_58980776_58983255_58983406_58984115_58984216_58984453_58984591_58990373_58990506_58993695_58993823_58998827_58999043_59000114_59000220_59000939_59001117_59135103_59135252_59139824_59139944_59140547_59140692_59142465_59142630_59148009_59148142_59152173_59152402_59153161_59153304_59154782_59154904_59155269_59155372_59156033_59156148_59159616_59159817_59163238_59163428_59164462_59164538_59164649_59164841_59165617_59165765_59167022_59167135_59168164_59168255_59169294_59169405_59169630_59169767_59170545_59170708_59172342_59172706_59174543_59174701_59183216_59183456_59201646_59201737_59203425_59203656_59205210_59205368_59208700_59208797_59220273_59220356_59222117
ES.21555.1	chr3	-	197	1	Intergenic	novelGene_17845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGCGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	58954187	58953990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58954000_58954200
ES.21556.1	chr3	-	180	1	Intergenic	novelGene_17846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGGGAGGGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	58998228	58998048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_58998000_58998200
ES.21557.1	chr3	-	1027	1	Antisense	novelGene_ENSMUSG00000056476.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTCAATCAGTCCTA	NA	False	NA	NA	False	NA	NA	NA	59000294	58999267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_58999300_59000300
ES.21558.1	chr3	-	164	1	Intergenic	novelGene_17848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAATTA	9942	False	NA	NA	False	NA	NA	NA	59185188	59185024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_59185000_59185200
ES.21559.1	chr3	-	178	1	Intergenic	novelGene_17849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60162461	60162283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_60162300_60162500
ES.2156.1	chr1	-	204	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGCTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	186948924	186948720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_186948700_186948900
ES.21560.1	chr3	-	245	1	Intergenic	novelGene_17850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACAATTGCTCTGTAG	NA	False	NA	NA	False	NA	NA	NA	60193061	60192816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_60192800_60193100
ES.21561.1	chr3	-	5031	1	Intergenic	novelGene_17851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	60402377	60397346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_60397300_60402400
ES.21562.1	chr3	+	5734	10	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	-62	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	38.8857141561281	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTGCCTGAGATTGA	NA	False	NA	27	True	AATAAA	-39	NA	60408537	60537170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.10	chr3	+	4112	9	NIC	ENSMUSG00000027763.14	novel	5460	9	NA	NA	67	23	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.0221295866833	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAATTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	60408765	60536825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.11	chr3	+	5548	11	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	39.6162845304806	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60435490	60536801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60435945_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.12	chr3	+	5897	11	NNC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	-45	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.3406134373443	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTATATTTGTGTGCC	NA	False	NA	18	True	AATAAA	-30	NA	60435503	60537161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_60435945_60436176_60437226_60503014_60503186_60511114_60511318_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.13	chr3	+	5297	10	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	163	23	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	49.9268600857764	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAATTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	60435711	60536825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60435945_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.14	chr3	+	5296	10	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	182	23	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	42.0505281010863	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAATTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	60435730	60536825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60435945_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.15	chr3	+	5462	10	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	-277	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_7	28.6373665938769	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTGTGCCTGAGAT	NA	False	NA	24	True	AATAAA	-36	NA	60436174	60537167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.16	chr3	+	4640	10	NIC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	135	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	49.3103049355762	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60436704	60536800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60437226_60503014_60503186_60504139_60504251_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.18	chr3	+	4436	9	NNC	ENSMUSG00000027763.14	novel	5151	9	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.0221295866833	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTGTGCCTGAGAT	NA	False	NA	24	True	AATAAA	-36	NA	60437090	60537167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_60437226_60503014_60503186_60511114_60511316_60520757_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.19	chr3	+	4242	8	ISM	ENSMUSG00000027763.14	ENSMUST00000193518.6	1343	9	7981	-2951	154	-2	3prime_fragment	FALSE	canonical	3	50	junction_5	28.0378752579362	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTGTGCCTGAGAT	2645	False	NA	24	True	AATAAA	-36	NA	60511112	60537167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.2	chr3	+	5387	10	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	-60	23	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	38.8857141561281	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAATTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	60408539	60536825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.20	chr3	+	6993	1	FSM	ENSMUSG00000104125.2	ENSMUST00000195434.2	3374	1	495	-4114	495	4114	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTATAAAAATCATAGCA	3832	False	NA	NA	False	NA	NA	NA	60512299	60519292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_60512300_60519300
ES.21562.21	chr3	+	6353	3	ISM	ENSMUSG00000027763.14	ENSMUST00000193517.6	5151	9	90300	1	-3947	-1	3prime_fragment	FALSE	canonical	3	109	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTGCCTGAGATT	888	False	NA	25	True	AATAAA	-37	NA	60526751	60537168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_60529662_60532544_60532620_60533800
ES.21562.22	chr3	+	7064	1	Genic_Genomic	ENSMUSG00000027763.14	novel	NA	NA	NA	NA	2557	3148	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCATACAAAACACAAATGAA	2012	False	NA	NA	False	NA	NA	NA	60533255	60540319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_60533300_60540300
ES.21562.3	chr3	+	5624	9	FSM	ENSMUSG00000027763.14	ENSMUST00000194069.6	5460	9	-148	-16	-49	-1	multi-exon	FALSE	canonical	3	10	junction_7	45.5314108610748	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTGCCTGAGATT	NA	False	NA	25	True	AATAAA	-37	NA	60408550	60537168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60532544_60532620_60533800
ES.21562.4	chr3	+	5698	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	26	True	AATAAA	-38	NA	60408608	60537169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.5	chr3	+	4480	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	-8	354	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATTTCAAATGTTAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	60408632	60535975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.6	chr3	+	5322	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	0	23	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAATTTCACAGTT	NA	False	NA	NA	False	NA	NA	NA	60408640	60536825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.7	chr3	+	5717	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	50.3666556364427	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAACTTCTCTTTCTTA	NA	False	NA	2	True	AATAAA	-14	NA	60408640	60537145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60504139_60504251_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ES.21562.8	chr3	+	5513	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	45.0515260562836	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	26	True	AATAAA	-38	NA	60408688	60537169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523145_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ES.21562.9	chr3	+	6276	1	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	3	-21548	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCCTTTCCTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	60408688	60414964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_60408700_60415000
ES.21563.1	chr3	-	7424	1	Intergenic	novelGene_17852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACCCCAC	NA	False	NA	NA	False	NA	NA	NA	60419880	60412456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_60412500_60419900
ES.21564.1	chr3	-	4508	5	Antisense	novelGene_ENSMUSG00000104125.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAACAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	60525724	60436968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_60437226_60503014_60503185_60511113_60511314_60520681_60520941_60522102
ES.21564.2	chr3	-	3571	5	Antisense	novelGene_ENSMUSG00000104125.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAACAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	60525724	60436968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_60437226_60503014_60503185_60511113_60511314_60520681_60520940_60523038
ES.21565.1	chr3	-	130	2	Intergenic	novelGene_17853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGAAGTGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	60758394	60756549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_60756626_60758340
ES.21566.1	chr3	+	1720	2	NNC	ENSMUSG00000027694.10	novel	182	2	NA	NA	-13	1254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	AATAAA	-19	NA	60784421	60786262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_60784466_60784586
ES.21567.1	chr3	+	6244	1	FSM	ENSMUSG00000027765.7	ENSMUST00000193943.2	2203	1	-61	-3980	-57	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGTCTGTATTATTAG	NA	False	NA	NA	False	AATAAA	-16	NA	60910158	60916402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_60910200_60916400
ES.21567.2	chr3	+	3611	2	FSM	ENSMUSG00000027765.7	ENSMUST00000193201.2	3614	2	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGTGTCTGTATTATT	NA	False	NA	NA	False	AATAAA	-14	NA	60910215	60916400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_60912021_60914594
ES.21568.1	chr3	+	176	1	Antisense	novelGene_ENSMUSG00000103473.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTAAGGGACCAGGGAT	NA	False	NA	NA	False	NA	NA	NA	61266944	61267120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_61266900_61267100
ES.21568.2	chr3	+	293	1	Antisense	novelGene_ENSMUSG00000103473.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	61266946	61267239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_61266900_61267200
ES.21569.1	chr3	+	3876	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2923	-6	2923	6	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTGGCTTGCGAC	NA	False	NA	NA	False	ATTAAA	-24	NA	61271981	61275857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_61272000_61275900
ES.21569.2	chr3	+	2475	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	2930	1388	2930	-1388	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTATTTGTGGTTTTGTG	NA	False	NA	67	True	AATACA	-24	NA	61271988	61274463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_61272000_61274500
ES.2157.1	chr1	-	6324	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGACTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	188346907	188340583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_188340600_188346900
ES.21570.1	chr3	-	860	1	Antisense	novelGene_ENSMUSG00000036894.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATACTTACACTCATACA	NA	False	NA	NA	False	NA	NA	NA	61274773	61273913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_61273900_61274800
ES.21571.1	chr3	-	4956	1	Intergenic	novelGene_17854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGACATTGACATTTAG	9608	False	NA	NA	False	NA	NA	NA	61353527	61348571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_61348600_61353500
ES.21572.1	chr3	-	171	1	Intergenic	novelGene_17855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	61396675	61396504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_61396500_61396700
ES.21573.1	chr3	-	1788	1	Intergenic	novelGene_17856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAATTTGGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	61973564	61971776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_61971800_61973600
ES.21574.1	chr3	-	176	1	Intergenic	novelGene_17857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	62161150	62160974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_62161000_62161200
ES.21575.1	chr3	+	5065	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	590	-17	-65	17	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCATCTTGTCTCGGGT	NA	False	NA	NA	False	AATAAA	-37	NA	62246354	62369659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
ES.21575.3	chr3	+	4791	14	NNC	ENSMUSG00000036885.15	novel	5638	14	NA	NA	34	-93	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	6.82060921466489	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTGCTGGTGTAAT	NA	False	NA	NA	False	TATAAA	-13	NA	62246453	62369549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367095_62367136_62367624
ES.21575.4	chr3	+	4862	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	689	87	34	-87	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGGTGTAATTTGATT	NA	False	NA	NA	False	TATAAA	-19	NA	62246453	62369555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
ES.21575.5	chr3	+	5369	1	Intergenic	novelGene_17858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	62296807	62302176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_62296800_62302200
ES.21576.1	chr3	-	3658	2	Antisense	novelGene_ENSMUSG00000036885.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	62270487	62264364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_62267910_62270374
ES.21577.1	chr3	-	2761	1	Intergenic	novelGene_17859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGCAGATGTAGTCAA	NA	False	NA	NA	False	NA	NA	NA	62345813	62343052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_62343100_62345800
ES.21578.1	chr3	-	1436	1	Intergenic	novelGene_17860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCATTGTTATCTAG	NA	False	NA	NA	False	NA	NA	NA	62353699	62352263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_62352300_62353700
ES.21579.1	chr3	-	6150	1	Antisense	novelGene_ENSMUSG00000036885.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATTCTCAAATGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	62371533	62365383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_62365400_62371500
ES.2158.1	chr1	-	6348	1	Antisense	novelGene_ENSMUSG00000026609.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACTATTTAATACAATTA	NA	False	NA	NA	False	NA	NA	NA	188520573	188514225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_188514200_188520600
ES.21580.1	chr3	+	1684	1	Antisense	novelGene_ENSMUSG00000027770.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCAGTTCCATTAGGTG	NA	False	NA	NA	False	NA	NA	NA	62385051	62386735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_62385100_62386700
ES.21580.2	chr3	+	582	1	Antisense	novelGene_ENSMUSG00000027770.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62385054	62385636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_62385100_62385600
ES.21581.1	chr3	-	6056	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	29	-465	29	465	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTCTTAATTTTTG	NA	False	NA	NA	False	NA	NA	NA	62414396	62374968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.12	chr3	-	4572	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	105.693140742434	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAGTTGTCATGTTTT	NA	False	NA	-3	True	NA	NA	NA	62414441	62375436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376789_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.14	chr3	-	5561	24	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	17	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	114.517100695079	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAGTTGTCATGTTTT	NA	False	NA	-3	True	NA	NA	NA	62414408	62375436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62408254_62408490_62409394_62409520_62414138
ES.21581.15	chr3	-	8829	24	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_8	148.498496297594	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414408	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385116_62386740_62386840_62388222_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401760_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.17	chr3	-	5603	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	112.123443876233	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414418	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404315_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.18	chr3	-	5584	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	112.207644817791	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414405	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384779_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.19	chr3	-	4111	27	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	137.33960521191	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414418	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376789_62376856_62377292_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.20	chr3	-	4945	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	142.63823704276	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414417	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376250_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.22	chr3	-	5026	27	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	17	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_26	137.47985328466	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414408	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376250_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138_62414235_62414285
ES.21581.23	chr3	-	4557	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	137.489979271218	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATAGTTGTCATGTTT	NA	False	NA	-4	True	NA	NA	NA	62414412	62375437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376789_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382675_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.26	chr3	-	5371	23	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.500291258228	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATATAGTTGTCATGT	NA	False	NA	-6	True	NA	NA	NA	62414408	62375439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62384745_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.28	chr3	-	4641	24	ISM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	4960	638	89	-638	3prime_fragment	FALSE	canonical	3	420	junction_17	54.1333856363491	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATCTTATATTTATTC	NA	False	NA	NA	False	AGTAAA	-28	NA	62409465	62376071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394
ES.21581.29	chr3	-	3597	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	-41	2064	-41	568	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTTGGTTTCTAG	NA	False	NA	NA	False	AATAAA	-44	NA	62414466	62377497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.3	chr3	-	5655	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	-35	0	-35	0	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCATGTTTTAAC	NA	False	NA	0	True	NA	NA	NA	62414460	62375433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.33	chr3	-	3559	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	7	563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	112.202538840359	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTTCTTGGTTTGGTT	NA	False	NA	NA	False	AATAAA	-39	NA	62414418	62377502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385116_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.36	chr3	-	6745	24	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	16	562	intron_retention	FALSE	canonical	3	420	junction_16	55.7611026353295	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTTCTTGGTTTGGT	NA	False	NA	NA	False	AATAAA	-38	NA	62414409	62377503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.37	chr3	-	3490	24	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	4	562	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	114.298104580851	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTTCTTGGTTTGGT	NA	False	NA	NA	False	AATAAA	-38	NA	62414421	62377503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.4	chr3	-	5110	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	105.355292225877	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTGTCATGTTTTA	NA	False	NA	-2	True	NA	NA	NA	62414439	62375435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62375729_62376250_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.41	chr3	-	3400	23	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	6	562	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	116.362180388618	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTTCTTGGTTTGGT	NA	False	NA	NA	False	AATAAA	-38	NA	62414419	62377503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.42	chr3	-	3490	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	16	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.140900643887	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTAACTTCTTGGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	62414409	62377505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388299_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.44	chr3	-	8963	23	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	-16	560	intron_retention	FALSE	canonical	0	0	junction_18	151.417141785355	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTAACTTCTTGGTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	62414441	62377505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62404825_62405023_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.46	chr3	-	4116	24	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	1	555	intron_retention	FALSE	canonical	3	420	junction_16	55.6789337837641	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAGCTAACTTCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	62414424	62377510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.47	chr3	-	3691	9	NIC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	6308	555	intron_retention	FALSE	canonical	3	432	junction_3	74.7436243100373	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAGCTAACTTCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	62389738	62377510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_62378169_62378742_62378896_62379419_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222
ES.21581.48	chr3	-	3189	21	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	6	555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	121.825479683029	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCAGCTAACTTCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	62414419	62377510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388334_62395953_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.49	chr3	-	3374	23	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	50	553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	116.381222037643	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTCAGCTAACTTCT	NA	False	NA	NA	False	AATAAA	-29	NA	62414375	62377512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391700_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.5	chr3	-	5580	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	112.209965639817	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTGTCATGTTTTA	NA	False	NA	-2	True	NA	NA	NA	62414408	62375435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409415_62409520_62414138
ES.21581.50	chr3	-	3539	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	7	543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	111.138052289334	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAATGTATAAATCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	62414418	62377522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386855_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.52	chr3	-	4047	24	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	6	536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	171.312811532253	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATGTACAATGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	62414419	62377529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62390955_62391696_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409518_62414138
ES.21581.53	chr3	-	2032	14	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	1	536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.030174985544	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATGTACAATGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	62396045	62377529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379421_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62394430_62394487_62395550_62395639_62395965
ES.21581.55	chr3	-	3451	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	-17	2186	-17	446	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTATGAAGTAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	62414442	62377619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.57	chr3	-	3288	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	-16	2348	-16	284	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTTTCTGACCTTAT	NA	False	NA	NA	False	TATAAA	-16	NA	62414441	62377781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.59	chr3	-	3242	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	8	269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.140900643887	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTGGAAAAAGTAATAT	NA	False	NA	NA	False	AGTAAA	-45	NA	62414417	62377796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388334_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.60	chr3	-	3089	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	1	2530	1	102	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTATCCTGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	62414424	62377963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21581.61	chr3	-	8325	1	FSM	ENSMUSG00000027770.6	ENSMUST00000192223.2	4201	1	-4098	-26	773	26	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGAAGTAGTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	62413652	62405327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_62405300_62413700
ES.21581.9	chr3	-	5621	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	110.969465269606	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTTGTCATGTTTTA	NA	False	NA	-2	True	NA	NA	NA	62414424	62375435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401760_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ES.21582.1	chr3	+	2589	3	Intergenic	novelGene_17861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTTTTGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	62414506	62418527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_62414543_62415358_62415525_62416140
ES.21583.1	chr3	+	158	1	Intergenic	novelGene_17862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAATCCAAAT	NA	False	NA	NA	False	NA	NA	NA	63086224	63086382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63086200_63086400
ES.21584.1	chr3	+	3722	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-85	-201	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTGTGTGCACGCC	NA	False	NA	9	True	AATAAA	-20	NA	63148872	63288843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.10	chr3	+	5821	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	2090	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148889	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.100	chr3	+	3411	16	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	8	5101	intron_retention	FALSE	non_canonical	0	0	junction_15	108.529565864177	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	63202989	63257141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63253574_63254557_63254639_63256038_63256872_63256917
ES.21584.101	chr3	+	3335	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	10	-195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	94.3300430657878	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGCACGCCATGCCA	NA	False	NA	15	True	AATAAA	-26	NA	63202991	63288849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269421_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.102	chr3	+	5937	23	FSM	ENSMUSG00000027820.13	ENSMUST00000194150.6	3345	23	25	-2617	25	2090	multi-exon	FALSE	canonical	2	9	junction_1	91.5947777211404	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63203006	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203300_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.104	chr3	+	2549	23	FSM	ENSMUSG00000027820.13	ENSMUST00000194150.6	3345	23	211	585	-100	-585	multi-exon	FALSE	canonical	2	9	junction_1	91.5947777211404	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAGCCTACGATCTAGC	NA	False	NA	NA	False	ATTAAA	-20	NA	63203192	63287932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203300_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.105	chr3	+	3762	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	25	-5	25	5	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCCTTATTTTTATCA	NA	False	NA	16	True	TATAAA	-20	NA	63203540	63289049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.106	chr3	+	5908	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	27	-2153	27	2153	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAAATGTGCTTTAAT	NA	False	NA	82	True	AATGAA	-27	NA	63203542	63291197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.107	chr3	+	1045	9	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	31	41490	31	-4486	5prime_fragment	FALSE	canonical	3	117	junction_1	104.818593293366	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATTGCCAATGTA	NA	False	NA	NA	False	AATAAA	-14	NA	63203546	63247554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ES.21584.109	chr3	+	3219	23	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	48	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.889656938034	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAATATTGAAGTTAT	NA	False	NA	7	True	AATAAA	-17	NA	63203563	63288519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235382_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.11	chr3	+	3383	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATATTGAAGTTATAT	NA	False	NA	9	True	AATAAA	-19	NA	63148889	63288521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.111	chr3	+	3301	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	91	390	91	137	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCATTGGACGGGTGTC	NA	False	NA	NA	False	NA	NA	NA	63203606	63288654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.112	chr3	+	6110	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	91	-2419	91	-1988	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCCTAATCCTTCATTT	NA	False	NA	NA	False	AATACA	-23	NA	63203606	63291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.113	chr3	+	5766	23	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	99	2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	107.377269937234	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63203614	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253481_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.114	chr3	+	3467	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	115	200	115	-200	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTGTGTGCACGCCA	NA	False	NA	10	True	AATAAA	-21	NA	63203630	63288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.116	chr3	+	5512	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	115	-1845	115	1845	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGTATTTTACCAACA	NA	False	NA	NA	False	ACTAAA	-18	NA	63203630	63290889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.117	chr3	+	4280	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	116	-614	116	614	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGTGGTTACAAACAT	NA	False	NA	16	True	CATAAA	-20	NA	63203631	63289658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.118	chr3	+	4793	24	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	116	2152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	105.214462769162	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACAAAATGTGCTTTAA	NA	False	NA	81	True	AATGAA	-26	NA	63203631	63291196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653_63288067_63289091
ES.21584.119	chr3	+	2904	21	NIC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	116	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_10	111.44774560304	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAATCATTGAATATTGA	NA	False	NA	1	True	AATAAA	-11	NA	63203631	63288513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.12	chr3	+	4440	11	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-68	2086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	180.873685206002	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCTTTGTGCTTTGC	NA	False	NA	15	True	NA	NA	NA	63148889	63291130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63197272_63197356_63256063_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.121	chr3	+	4432	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	116	-766	116	766	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGTTATTTTCATTT	NA	False	NA	99	True	NA	NA	NA	63203631	63289810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.122	chr3	+	5652	22	NIC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	117	2149	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	108.300434565075	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGACAAAATGTGCTT	NA	False	NA	78	True	AATGAA	-23	NA	63203632	63291193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203744_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.123	chr3	+	5659	22	NIC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	117	2088	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	109.607959391208	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63203632	63291132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.124	chr3	+	3499	22	NIC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	119	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	108.300434565075	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTACAGTCCTTATT	NA	False	NA	9	True	TATAAA	-13	NA	63203634	63289042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203744_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.125	chr3	+	955	9	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	120	-4486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.99470051369	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATTGCCAATGTA	NA	False	NA	NA	False	AATAAA	-14	NA	63203635	63247554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203750_63207552_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ES.21584.126	chr3	+	5402	24	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	130	1791	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	105.214462769162	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGTCTTATATTTCCTT	NA	False	NA	NA	False	GATAAA	-18	NA	63203645	63290835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653_63289728_63289768
ES.21584.127	chr3	+	5555	21	NIC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	151	2086	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	132.52524287848	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCTTTGTGCTTTGC	NA	False	NA	15	True	NA	NA	NA	63203666	63291130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235590_63235710_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.128	chr3	+	3357	23	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	166	220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	107.377269937234	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAAAGGGTCTAACTGT	NA	False	NA	-97	True	NA	NA	NA	63203681	63288737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253426_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.129	chr3	+	3096	23	NNC	ENSMUSG00000027820.13	novel	3782	23	NA	NA	170	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.146429889271	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCATTGAATATTGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	63203685	63288516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251059_63251154_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.13	chr3	+	3582	27	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	-204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	152.245621578884	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTAGGCCTGTGTGCAC	NA	False	NA	6	True	AATAAA	-17	NA	63148889	63288840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63156150_63156274_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653_63288310_63288552
ES.21584.130	chr3	+	5441	20	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	30616	-2090	26551	2090	3prime_fragment	FALSE	canonical	3	319	junction_8	43.5859389255544	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63234131	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.132	chr3	+	5163	17	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	32074	-2153	28009	2153	3prime_fragment	FALSE	canonical	3	319	junction_5	45.7506830550102	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAAATGTGCTTTAAT	NA	False	NA	82	True	AATGAA	-27	NA	63235589	63291197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.133	chr3	+	5167	2	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	44406	5157	intron_retention	FALSE	non_canonical	0	0	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	63251986	63257197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63256872_63256915
ES.21584.134	chr3	+	4216	9	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	51040	-2086	46975	2086	3prime_fragment	FALSE	canonical	3	324	junction_1	43.8605745516403	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCTTTGTGCTTTGC	NA	False	NA	15	True	NA	NA	NA	63254555	63291130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.135	chr3	+	2496	6	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	65834	-609	61769	609	3prime_fragment	FALSE	canonical	3	377	junction_3	27.9098548903429	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACTGTGTGGTTACA	2532	False	NA	11	True	CATAAA	-15	NA	63269349	63289653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.136	chr3	+	3851	5	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	68666	-2086	64601	2086	3prime_fragment	FALSE	canonical	3	377	junction_2	28.4824507372522	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCTTTGTGCTTTGC	5364	False	NA	15	True	NA	NA	NA	63272181	63291130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.137	chr3	+	4505	3	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	69243	200	65178	-200	3prime_fragment	FALSE	canonical	3	388	junction_2	31	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTGTGTGCACGCCA	5941	False	NA	10	True	AATAAA	-21	NA	63272758	63288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63275996_63276300_63276378_63287653
ES.21584.138	chr3	+	4604	3	ISM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	71498	-2154	67433	2154	3prime_fragment	FALSE	canonical	3	388	junction_2	31	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAAATGTGCTTTAATT	8196	False	NA	83	True	AATGAA	-28	NA	63275013	63291198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63275996_63276300_63276378_63287653
ES.21584.14	chr3	+	5742	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	2090	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148889	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.15	chr3	+	4854	26	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	699	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	141.068414607948	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATCAATTTAAACATAC	NA	False	NA	32	True	TTTAAA	-44	NA	63148890	63289743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63154762_63154941_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.16	chr3	+	3450	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.082947785266	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATTGAATATTGAAGTT	NA	False	NA	5	True	AATAAA	-15	NA	63148890	63288517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.17	chr3	+	6051	23	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-1996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	134.015263716828	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTGATACATCCTAATC	NA	False	NA	NA	False	AATACA	-15	NA	63148890	63291455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.18	chr3	+	1199	11	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-4486	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	179.777668246087	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATTGCCAATGTA	NA	False	NA	NA	False	AATAAA	-14	NA	63148890	63247554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ES.21584.19	chr3	+	6129	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.082947785266	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACAAAATGTGCTTTAA	NA	False	NA	81	True	AATGAA	-26	NA	63148890	63291196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.2	chr3	+	6076	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-82	2156	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTGCTTTAATTTT	NA	False	NA	85	True	AATGAA	-30	NA	63148875	63291200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.20	chr3	+	5892	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2090	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	110.88673353859	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148890	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.21	chr3	+	3529	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-201	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTGTGTGCACGCC	NA	False	NA	9	True	AATAAA	-20	NA	63148890	63288843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.22	chr3	+	3958	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	53	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTTAGTTTTCATGCC	NA	False	NA	64	True	AATGAA	-14	NA	63148890	63289097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.23	chr3	+	4411	10	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-67	2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	197.071397728004	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148890	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.24	chr3	+	3450	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-201	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTGTGTGCACGCC	NA	False	NA	9	True	AATAAA	-20	NA	63148890	63288843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.25	chr3	+	3203	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATTGAATATTGAAGTT	NA	False	NA	5	True	AATAAA	-15	NA	63148890	63288517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.26	chr3	+	3130	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	6	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTGAAGTTATATGG	NA	False	NA	11	True	AATAAA	-21	NA	63148890	63288523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.27	chr3	+	3969	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.082947785266	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCATTTCTACAGTC	NA	False	NA	3	True	TATAAA	-7	NA	63148890	63289036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.28	chr3	+	749	3	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-67	-81490	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATGGAAAAAATA	NA	False	NA	NA	False	ATTAAA	-11	NA	63148890	63153757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63153256
ES.21584.29	chr3	+	2596	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-607	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGCTGTGAATGAAAG	NA	False	NA	NA	False	CATAAA	-16	NA	63148890	63287910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.3	chr3	+	4870	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.082947785266	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTGCCTAGATTCC	NA	False	NA	NA	False	ATTAAA	-30	NA	63148889	63289936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.30	chr3	+	2765	2	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-67	-79617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGGATTCTGTCACTT	NA	False	NA	NA	False	ATTAAA	-20	NA	63148890	63155630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63150788_63154762
ES.21584.32	chr3	+	4494	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	764	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGGGTTATTTTCAT	NA	False	NA	97	True	NA	NA	NA	63148890	63289808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.33	chr3	+	4327	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	676	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTTATATGACTGTTT	NA	False	NA	9	True	TTTAAA	-21	NA	63148890	63289720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.34	chr3	+	4362	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	632	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTATCTTTTTCCCTTT	NA	False	NA	34	True	CATAAA	-38	NA	63148890	63289676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.35	chr3	+	6319	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-1993	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATACATCCTAATCCTT	NA	False	NA	NA	False	AATACA	-18	NA	63148890	63291458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.36	chr3	+	4432	24	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	606	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	113.727711832092	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTCAGACTGTGTGGTT	NA	False	NA	8	True	CATAAA	-12	NA	63148890	63289650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.37	chr3	+	5976	24	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2150	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	113.727711832092	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAGACAAAATGTGCTTT	NA	False	NA	79	True	AATGAA	-24	NA	63148890	63291194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.38	chr3	+	3731	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACAGTCCTTATTTTT	NA	False	NA	12	True	TATAAA	-16	NA	63148890	63289045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.39	chr3	+	6270	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-1996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.517489546908	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTGATACATCCTAATC	NA	False	NA	NA	False	AATACA	-15	NA	63148890	63291455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63260010_63260068_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.4	chr3	+	6168	26	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	2086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	141.068414607948	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCTTTGTGCTTTGC	NA	False	NA	15	True	NA	NA	NA	63148889	63291130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63158040_63158145_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.40	chr3	+	5991	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.220159462948	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148890	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63171259_63171431_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.41	chr3	+	5938	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	0	2152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.330642555344	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACAAAATGTGCTTTAA	NA	False	NA	81	True	AATGAA	-26	NA	63148957	63291196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63185129_63185253_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.42	chr3	+	6049	26	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	0	2088	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.87960249802	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63148957	63291132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63185129_63185253_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.43	chr3	+	4044	1	Intergenic	novelGene_17863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAATATTCTAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	63149051	63153095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63149100_63153100
ES.21584.44	chr3	+	6109	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	2747	2152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.865024728108	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACAAAATGTGCTTTAA	NA	False	NA	81	True	AATGAA	-26	NA	63151704	63291196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63151933_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.45	chr3	+	8945	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	4243	2143	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	113.590599067869	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAACTCATAGACAAAAT	NA	False	NA	72	True	AATGAA	-17	NA	63153200	63291187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63156274_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.46	chr3	+	303	1	Intergenic	novelGene_17864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCAGTTTTTTTGTTT	NA	False	NA	NA	False	TTTAAA	-12	NA	63168940	63169243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63168900_63169200
ES.21584.47	chr3	+	3286	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-22995	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.865024728108	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAATATTGAAGTTAT	NA	False	NA	7	True	AATAAA	-17	NA	63179691	63288519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63179774_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.48	chr3	+	6650	2	Genic_Genomic	ENSMUSG00000027820.13	novel	615	6	NA	NA	-10361	-34277	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTGTATTAAACAAGGTA	NA	False	NA	NA	False	NA	NA	NA	63192325	63200970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_63194959_63196953
ES.21584.49	chr3	+	6938	22	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-5302	611	intron_retention	FALSE	canonical	3	40	junction_1	86.9971720029332	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTGGTTACAAA	NA	False	NA	13	True	CATAAA	-17	NA	63197384	63289655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.5	chr3	+	4429	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	110.88673353859	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACATCCTTATCTTTTT	NA	False	NA	28	True	CATAAA	-32	NA	63148889	63289670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.50	chr3	+	6027	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	39	2162	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTAATTTTGTTTTT	NA	False	NA	91	True	AATGAA	-36	NA	63202725	63291206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.51	chr3	+	3607	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-82	-197	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGTGCACGCCATGC	NA	False	NA	13	True	AATAAA	-24	NA	63202786	63288847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.52	chr3	+	3573	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-82	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	95.1403486981902	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTGTGTGCACGCC	NA	False	NA	9	True	AATAAA	-20	NA	63202786	63288843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272283_63272413_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.53	chr3	+	4564	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-78	764	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGGGTTATTTTCAT	NA	False	NA	97	True	NA	NA	NA	63202790	63289808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.54	chr3	+	3218	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	2	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAATATTGAAGTTAT	NA	False	NA	7	True	AATAAA	-17	NA	63202847	63288519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.56	chr3	+	5772	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	2090	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	95.7353877247589	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63202847	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247539_63249355_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.57	chr3	+	6155	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	-1995	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGATACATCCTAATCC	NA	False	NA	NA	False	AATACA	-16	NA	63202847	63291456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.6	chr3	+	4669	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	763	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTCTGGGTTATTTTCA	NA	False	NA	96	True	NA	NA	NA	63148889	63289807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.60	chr3	+	2887	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-16	674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	140.816281752543	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATACTTATATGACTGT	NA	False	NA	7	True	TTTAAA	-19	NA	63202852	63289718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256129_63266330_63266386_63269352_63269440_63272442_63272484_63275899_63275996_63276300_63276378_63287653_63287972_63289286
ES.21584.61	chr3	+	2619	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-16	-592	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGGAGGGAGCCTACG	NA	False	NA	NA	False	ATTAAA	-13	NA	63202852	63287925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.62	chr3	+	3735	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTACAGTCCTTATT	NA	False	NA	9	True	TATAAA	-13	NA	63202853	63289042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.63	chr3	+	5819	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-15	2088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	94.1343004909774	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63202853	63291132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276306_63276378_63287653
ES.21584.64	chr3	+	2759	17	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-7	5119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	105.206177783199	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	63202861	63257159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256872_63256915
ES.21584.65	chr3	+	5715	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-3	2152	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	96.2766233756501	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGACAAAATGTGCTTTAA	NA	False	NA	81	True	AATGAA	-26	NA	63202865	63291196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.66	chr3	+	6893	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-1	460	intron_retention	FALSE	canonical	3	270	junction_1	51.6334543241315	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCCTGTCTATTCTG	NA	False	NA	NA	False	NA	NA	NA	63202867	63289504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.67	chr3	+	3326	24	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	5	2088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	93.6368119490667	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63202873	63291132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653_63287838_63290316
ES.21584.68	chr3	+	7058	21	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	11	731	intron_retention	FALSE	canonical	0	0	junction_11	98.521520491718	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGGTAGTAGAAGATT	NA	False	NA	64	True	TTTAAA	-18	NA	63202879	63289775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.69	chr3	+	4594	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	11	883	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGCAACTCTGGTGC	NA	False	NA	NA	False	ATTAAA	-21	NA	63202879	63289927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.7	chr3	+	1170	3	NNC	ENSMUSG00000027820.13	novel	615	6	NA	NA	-68	-79564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAGTATTTTAACTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	63148889	63155683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63150636_63150788_63154762
ES.21584.70	chr3	+	3330	22	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	14	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	123.792306495163	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTGTGTGCACGCC	NA	False	NA	9	True	AATAAA	-20	NA	63202882	63288843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254629_63256043_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.73	chr3	+	5746	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	28	2088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	94.6162759223882	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTTGTGCTTTGCAT	NA	False	NA	17	True	NA	NA	NA	63202896	63291132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269441_63272186_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.75	chr3	+	4167	16	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	28	5162	intron_retention	FALSE	non_canonical	0	0	junction_15	108.386838069328	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	63202896	63257202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63256872_63256915
ES.21584.76	chr3	+	5998	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	28	-2103	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATGCTCCAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	63202896	63291348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.78	chr3	+	2933	21	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_10	98.5267856981034	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATTGAATATTGAAGTT	NA	False	NA	5	True	AATAAA	-15	NA	63202899	63288517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.79	chr3	+	3476	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	31	-203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	94.6162759223882	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGGCCTGTGTGCACG	NA	False	NA	7	True	AATAAA	-18	NA	63202899	63288841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269467_63272188_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.8	chr3	+	4544	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	892	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTGCCTAGATTCC	NA	False	NA	NA	False	ATTAAA	-30	NA	63148889	63289936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.80	chr3	+	5613	22	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	33	2087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.286587942241	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTTGTGCTTTGCA	NA	False	NA	16	True	NA	NA	NA	63202901	63291131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203009_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.81	chr3	+	972	9	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	44	-4486	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	55.9797675504284	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATTGCCAATGTA	NA	False	NA	NA	False	AATAAA	-14	NA	63202912	63247554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ES.21584.82	chr3	+	4602	23	FSM	ENSMUSG00000027820.13	ENSMUST00000194150.6	3345	23	-58	-1199	55	672	multi-exon	FALSE	canonical	2	9	junction_1	91.5947777211404	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATACTTATATGACT	NA	False	NA	5	True	TTTAAA	-17	NA	63202923	63289716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63203300_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.83	chr3	+	4283	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	55	616	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTGGTTACAAACATCC	NA	False	NA	18	True	CATAAA	-22	NA	63202923	63289660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.84	chr3	+	4227	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-51	729	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	96.2766233756501	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGGTGGTAGTAGAAGA	NA	False	NA	62	True	TTTAAA	-16	NA	63202930	63289773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.85	chr3	+	4286	24	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-50	674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	93.6368119490667	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATACTTATATGACTGT	NA	False	NA	7	True	TTTAAA	-19	NA	63202931	63289718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653_63288489_63288535
ES.21584.86	chr3	+	3430	23	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-49	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.2331676696604	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCTGTGTGCACGCCA	NA	False	NA	10	True	AATAAA	-21	NA	63202932	63288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203009_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.88	chr3	+	5512	21	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-44	2090	combination_of_known_splicesites	FALSE	canonical	3	5	junction_10	98.5267856981034	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63202937	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.89	chr3	+	1069	9	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-40	-4360	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	55.9797675504284	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAATGCATAGGCTA	NA	False	NA	NA	False	AATAAA	-21	NA	63202941	63247680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436
ES.21584.9	chr3	+	2711	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-68	-584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	118.799301774377	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGCCTACGATCTAGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	63148889	63287933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63148988_63197272_63197448_63207550_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.93	chr3	+	2389	17	NNC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-21	9555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	105.206177783199	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGTGTAAAAAGTAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	63202960	63261595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63260893
ES.21584.95	chr3	+	6514	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-15	2090	intron_retention	FALSE	canonical	3	270	junction_1	51.4641851997741	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63202966	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.98	chr3	+	2927	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	96.2766233756501	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCATTGAATATTGAAGT	NA	False	NA	4	True	AATAAA	-14	NA	63202973	63288516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21584.99	chr3	+	5634	22	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	-1	2090	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	95.7352500139739	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63202980	63291134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ES.21585.1	chr3	-	596	1	Intergenic	novelGene_17865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATGTGTTAC	NA	False	NA	NA	False	AATGAA	-34	NA	63248187	63247591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_63247600_63248200
ES.21586.1	chr3	-	4507	1	Intergenic	novelGene_17866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTGAGGAATACCGAAT	NA	False	NA	NA	False	NA	NA	NA	63283981	63279474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_63279500_63284000
ES.21587.1	chr3	+	835	1	Genic_Genomic	ENSMUSG00000027820.13	novel	NA	NA	NA	NA	85045	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCATTTTACAAATGAT	NA	False	NA	NA	False	AATAAA	-19	NA	63292625	63293460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_63292600_63293500
ES.21588.1	chr3	-	3109	1	Intergenic	novelGene_17867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATCAGAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	63583589	63580480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_63580500_63583600
ES.21589.1	chr3	+	2027	2	Antisense	novelGene_ENSMUSG00000036834.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCAGAGTGCCTGATTA	NA	False	NA	NA	False	NA	NA	NA	63626564	63630484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_63626701_63628593
ES.2159.1	chr1	+	292	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATGAA	8963	False	NA	NA	False	NA	NA	NA	188663650	188663942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_188663600_188663900
ES.21590.1	chr3	+	177	1	Intergenic	novelGene_17868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	63684000	63684177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63684000_63684200
ES.21591.1	chr3	-	3709	2	ISM	ENSMUSG00000036834.17	ENSMUST00000159982.9	5099	14	38827	-210	5	207	3prime_fragment	FALSE	canonical	3	19	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAGTATTGTATATAC	NA	False	NA	NA	False	AATATA	-23	NA	63609459	63603447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_63606902_63609204
ES.21591.11	chr3	-	5565	2	FSM	ENSMUSG00000036834.17	ENSMUST00000176861.2	805	2	-2070	-2690	-1759	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTGATGATTTTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	63611534	63603663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63606899_63609204
ES.21591.13	chr3	-	5322	23	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	-8	-669	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_22	4.82931817647034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTCTAGAAGATGTTAGA	NA	False	NA	NA	False	TATAAA	-24	NA	63806871	63604820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626704_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63806647
ES.21591.14	chr3	-	2631	1	NIC	ENSMUSG00000036834.17	novel	6271	24	NA	NA	-15921	27221	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAGACAAACTAACT	NA	False	NA	NA	False	ATTAAA	-36	NA	63664207	63661576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_63661600_63664200
ES.21591.2	chr3	-	6593	24	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	5	junction_22	5.35930193236661	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTTTGTTTATAAAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	63806890	63603654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626704_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63793348_63793435_63806647
ES.21591.3	chr3	-	7147	25	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_22	7.23561791878666	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTTTGTTTATAAAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	63806872	63603654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63610045_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626701_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63792291_63792382_63793348_63793435_63806647
ES.21591.5	chr3	-	7866	22	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	6.20218672577712	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTTTGTTTATAAAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	63806843	63603654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626701_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63687193_63688977_63691411_63691559_63778076_63778196_63806647
ES.21591.6	chr3	-	6497	23	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_22	4.82931817647034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGATTTTGTTTATAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	63806881	63603655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626704_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63806647
ES.21591.7	chr3	-	6662	25	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	7.18602037910337	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGATTTTGTTTATAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	63806874	63603655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626704_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63792291_63792382_63793348_63793431_63806647
ES.21591.9	chr3	-	6289	22	NNC	ENSMUSG00000036834.17	novel	6010	23	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	6.84158287502444	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGATTTTGTTTATAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	63806882	63603656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626704_63628593_63628666_63630170_63630392_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681190_63688730_63688977_63691411_63691559_63778076_63778196_63806806
ES.21592.1	chr3	-	2435	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	69	-864	-12	864	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTGGTCTGCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	63836824	63821240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
ES.21592.2	chr3	-	1569	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	64	7	-17	-7	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACATTCTTTCTGAG	NA	False	NA	NA	False	AATAAA	-8	NA	63836829	63822111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
ES.21592.3	chr3	-	6004	4	NIC	ENSMUSG00000048581.13	novel	1640	5	NA	NA	10	-7	intron_retention	FALSE	canonical	3	41	junction_1	5.73488351136175	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACATTCTTTCTGAG	NA	False	NA	NA	False	AATAAA	-8	NA	63836802	63822111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_63827783_63832754_63832903_63834684_63834745_63836677
ES.21592.5	chr3	-	1491	4	ISM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	88	4523	7	-4523	5prime_fragment	FALSE	canonical	3	41	junction_1	5.73488351136175	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63836805	63826627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_63827783_63832754_63832903_63834684_63834745_63836677
ES.21593.1	chr3	+	3033	17	Fusion	ENSMUSG00000097724.3_ENSMUSG00000027823.10	novel	2669	2	NA	NA	527	-5828	multi-exon	FALSE	canonical	2	3	junction_1	399.314524959649	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63871582	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_63872330_63874687_63874902_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.11	chr3	+	3830	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	39	4236	39	-4236	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAAAATGTATGTAGTG	NA	False	NA	NA	False	NA	NA	NA	63883565	63925764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.13	chr3	+	7695	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	44	366	44	-366	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGGGGGAAATGTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	63883570	63929634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.16	chr3	+	4372	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	45	3688	45	-3688	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGGGAACCTATCAGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	63883571	63926312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.18	chr3	+	4714	17	Fusion	ENSMUSG00000027823.10_ENSMUSG00000027824.6	novel	8105	16	NA	NA	51	-20483	multi-exon	FALSE	canonical	0	0	junction_15	399.595337302314	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAAACTAATTGAGATG	NA	False	NA	NA	False	NA	NA	NA	63883577	63996422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63989222_63989299_63993891
ES.21593.19	chr3	+	2212	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	54	-5828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	307.233635311414	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63883580	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906128_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.2	chr3	+	8104	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	309.549967246359	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATCTTGTGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	63883526	63930001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921676_63921806_63922845_63923019_63924053
ES.21593.20	chr3	+	2872	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	55	5178	55	-5178	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGCCCTGTGTCACT	NA	False	NA	NA	False	AATATA	-17	NA	63883581	63924822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.21	chr3	+	2210	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	57	-5830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	410.073196718179	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGTGTGTAACTGAGG	NA	False	NA	12	True	AATAAA	-12	NA	63883583	63924170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921676_63921806_63922845_63923013_63924053
ES.21593.24	chr3	+	3934	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	64	4107	64	-4107	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCATGTTTACTATC	NA	False	NA	NA	False	NA	NA	NA	63883590	63925893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.25	chr3	+	6810	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	70	1225	70	-1225	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTTTTATGAAGTGC	NA	False	NA	NA	False	CATAAA	-22	NA	63883596	63928775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.26	chr3	+	2126	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	88	-5829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	310.022465135817	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTGTAACTGAGGC	NA	False	NA	13	True	AATAAA	-13	NA	63883614	63924171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919030_63921672_63921806_63922845_63923019_63924053
ES.21593.27	chr3	+	6878	17	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	88	-1092	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	300.989818920425	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGTGAAATGACTAAAAT	NA	False	NA	-42	True	TATAAA	-16	NA	63883614	63928908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053_63926203_63926249
ES.21593.28	chr3	+	2054	15	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	4036	-5828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	314.772188435136	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63887562	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909048_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.29	chr3	+	6377	11	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14048	1025	14048	-1025	3prime_fragment	FALSE	canonical	3	954	junction_5	119.335702955989	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCATTAAGTCTTG	NA	False	NA	25	True	AGTAAA	-29	NA	63897574	63928975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.3	chr3	+	7082	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	1	1022	1	-1022	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTAAGTCTTGGTG	NA	False	NA	28	True	AGTAAA	-32	NA	63883527	63928978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.30	chr3	+	1464	11	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	14100	-5828	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_9	359.452653349506	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63897626	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922903_63923019_63924053
ES.21593.31	chr3	+	1362	11	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	14197	-5828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	374.646246477927	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63897723	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904307_63906058_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.32	chr3	+	221	1	Intergenic	novelGene_17869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTTATATTTTAATT	NA	False	NA	NA	False	ATTAAA	-6	NA	63905278	63905499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63905300_63905500
ES.21593.33	chr3	+	5227	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	38146	1026	38146	-1026	3prime_fragment	FALSE	canonical	3	1240	junction_2	56	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTCATTAAGTCTT	NA	False	NA	24	True	AGTAAA	-28	NA	63921672	63928974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_63921806_63922845_63923019_63924053
ES.21593.34	chr3	+	171	1	Intergenic	novelGene_17872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	63948038	63948209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_63948000_63948200
ES.21593.4	chr3	+	2277	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	5	5823	5	-5823	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACTGAGGCTCATTA	NA	False	NA	19	True	AATAAA	-19	NA	63883531	63924177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.5	chr3	+	4358	15	NIC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	12	-5828	intron_retention	FALSE	canonical	3	954	junction_9	101.657287400524	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTGTAACTGAGGCT	NA	False	NA	14	True	AATAAA	-14	NA	63883538	63924172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_63883732_63887556_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.6	chr3	+	2420	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	12	5673	12	-5673	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGTCTGGGTAAATAA	NA	False	NA	NA	False	ATTAAA	-15	NA	63883538	63924327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.7	chr3	+	4106	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	12	3987	12	-3987	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGTGACTTTAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	63883538	63926013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.8	chr3	+	2774	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14	5317	14	-5317	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTAGCATACCAGGG	NA	False	NA	NA	False	AGTAAA	-15	NA	63883540	63924683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ES.21593.9	chr3	+	2179	16	NNC	ENSMUSG00000027823.10	novel	8105	16	NA	NA	17	-5827	at_least_one_novel_splicesite	FALSE	canonical	2	101	junction_15	284.975523315405	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTAACTGAGGCTC	NA	False	NA	15	True	AATAAA	-15	NA	63883543	63924173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63922937_63924053
ES.21594.1	chr3	-	3226	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	-76	0	-76	0	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	63872265	63849750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ES.21594.2	chr3	-	4832	3	NIC	ENSMUSG00000027822.17	novel	3150	6	NA	NA	15672	-5	intron_retention	FALSE	canonical	3	71	junction_2	2	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTCAAAGCTGTTTT	9257	False	NA	NA	False	AATAAA	-19	NA	63856121	63849755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_63850838_63851986_63855108_63855492
ES.21594.3	chr3	-	2871	6	NNC	ENSMUSG00000027822.17	novel	3150	6	NA	NA	65	-7	intron_retention	FALSE	canonical	2	7	junction_4	25.5295906743528	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAATCTCAAAGCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	63872022	63849757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855573_63861234_63861426_63870836
ES.21594.4	chr3	-	2847	6	NNC	ENSMUSG00000027822.17	novel	3150	6	NA	NA	22	-11	intron_retention	FALSE	canonical	2	4	junction_1	27.1470072015314	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTATAAATCTCAAAGC	NA	False	NA	NA	False	AATAAA	-13	NA	63872065	63849761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_63850838_63852154_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ES.21594.6	chr3	-	2262	7	FSM	ENSMUSG00000027822.17	ENSMUST00000160883.2	1978	7	-211	-73	83	-11	multi-exon	FALSE	canonical	0	0	junction_1	27.3840991980545	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTATAAATCTCAAAGC	NA	False	NA	NA	False	AATAAA	-13	NA	63872004	63849761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63849951_63850642_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ES.21594.7	chr3	-	2660	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	186	304	84	-220	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTATAAAATGAGAG	NA	False	NA	NA	False	TATAAA	-16	NA	63872003	63850054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ES.21594.8	chr3	-	1236	1	NIC	ENSMUSG00000027822.17	novel	2554	7	NA	NA	83	-20934	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGAGCTCTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	63872004	63870768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_63870800_63872000
ES.21595.1	chr3	-	1715	1	Antisense	novelGene_ENSMUSG00000097724.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	63875328	63873613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_63873600_63875300
ES.21596.1	chr3	-	1290	1	Intergenic	novelGene_17870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATACAAAGACAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	63916863	63915573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_63915600_63916900
ES.21597.1	chr3	-	7397	1	Antisense	novelGene_ENSMUSG00000027823.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATACCTTTATTATA	NA	False	NA	NA	False	NA	NA	NA	63932017	63924620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_63924600_63932000
ES.21597.2	chr3	-	1823	1	Intergenic	novelGene_17871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTGGTGGTGGTGCATG	NA	False	NA	NA	False	TATAAA	-36	NA	63932015	63930192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_63930200_63932000
ES.21598.1	chr3	+	174	1	Intergenic	novelGene_17873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATCACACTGTC	NA	False	NA	NA	False	NA	NA	NA	65186146	65186320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_65186100_65186300
ES.21599.1	chr3	-	1453	1	Genic_Genomic	ENSMUSG00000090120.2	novel	NA	NA	NA	NA	24170	969	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTAGTGGCTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	65232680	65231227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_65231200_65232700
ES.216.1	chr1	+	174	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAAAGACAGG	NA	False	NA	NA	False	NA	NA	NA	31300831	31301005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_31300800_31301000
ES.2160.1	chr1	+	298	1	Antisense	novelGene_ENSMUSG00000026608.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACCTCCAAGGACACATG	2710	False	NA	NA	False	NA	NA	NA	188729721	188730019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_188729700_188730000
ES.21600.1	chr3	+	2185	6	ISM	ENSMUSG00000027827.18	ENSMUST00000161979.8	1965	15	102903	-1134	2564	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACATCTTTTGGGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	65263751	65285639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278867_65283899
ES.21601.1	chr3	-	9138	1	Antisense	novelGene_ENSMUSG00000027827.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTGTTTACTCTAT	NA	False	NA	NA	False	NA	NA	NA	65279373	65270235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_65270200_65279400
ES.21602.1	chr3	+	360	1	Antisense	novelGene_ENSMUSG00000027828.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65288457	65288817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_65288500_65288800
ES.21602.2	chr3	+	3809	1	Antisense	novelGene_ENSMUSG00000027828.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAAATGTATTCATTACC	NA	False	NA	NA	False	TTTAAA	-9	NA	65288457	65292266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_65288500_65292300
ES.21603.1	chr3	-	3072	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	-114	-1	-114	1	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTGTAATTCTT	2602	False	NA	0	True	ATTAAA	-21	NA	65300158	65287074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.10	chr3	-	2874	5	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	271.844624739942	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2779	False	NA	-10	True	ATTAAA	-11	NA	65299981	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65289456_65290412_65290545_65295163_65295252_65298745_65298873_65299825
ES.21603.11	chr3	-	2839	6	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	23	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.814424213821	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2739	False	NA	-10	True	ATTAAA	-11	NA	65300021	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65288717_65288802_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.12	chr3	-	2794	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	11	152	11	-152	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATACAACTTGTACTGT	2727	False	NA	NA	False	AATAGA	-12	NA	65300033	65287227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.13	chr3	-	1573	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	14	1370	14	655	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCTTTTAATTGTGA	2730	False	NA	NA	False	AATAAA	-18	NA	65300030	65288445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.14	chr3	-	861	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	-16	2112	-16	-87	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAGAGTACCAGGGCA	2700	False	NA	-1	True	ATTAAA	-14	NA	65300060	65289187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.2	chr3	-	2539	6	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.814424213821	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTGTTTTTCTGTAA	2740	False	NA	-5	True	ATTAAA	-16	NA	65300020	65287079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65287862_65288251_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.3	chr3	-	2808	6	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.814424213821	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2788	False	NA	-10	True	ATTAAA	-11	NA	65299972	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65287705_65287772_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.4	chr3	-	3878	4	ISM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	23	9	23	-9	intron_retention	FALSE	canonical	3	568	junction_2	51.9379972231848	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2739	False	NA	-10	True	ATTAAA	-11	NA	65300021	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745
ES.21603.5	chr3	-	3867	4	FSM	ENSMUSG00000027828.13	ENSMUST00000119896.2	1469	4	-32	-2366	-32	-9	multi-exon	FALSE	canonical	3	545	junction_3	65.0281990114033	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2754	False	NA	-10	True	ATTAAA	-11	NA	65300006	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65290545_65295152_65295252_65298745_65298873_65299825
ES.21603.7	chr3	-	3024	5	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	-4	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	273.348678431047	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2782	False	NA	-10	True	ATTAAA	-11	NA	65299978	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299683
ES.21603.8	chr3	-	2086	6	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.814424213821	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	2717	False	NA	-10	True	ATTAAA	-11	NA	65300043	65287084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65287294_65288154_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ES.21604.1	chr3	+	222	1	Intergenic	novelGene_17874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGACCATGAGGAATAG	220	False	NA	NA	False	NA	NA	NA	65339760	65339982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_65339800_65340000
ES.21605.1	chr3	+	4329	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	-507	369	-507	-369	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTCTATTTCTATTT	NA	False	NA	25	True	NA	NA	NA	65435323	65462570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.10	chr3	+	2510	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	54	1627	4	1259	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTAGGCTAATTTAAAC	NA	False	NA	NA	False	NA	NA	NA	65435884	65461312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.11	chr3	+	6706	6	NNC	ENSMUSG00000034640.10	novel	594	3	NA	NA	8265	-374	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.6413276680552	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTTGTTCTATTTC	NA	False	NA	20	True	NA	NA	NA	65444145	65462565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_65446375_65446428_65448273_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.12	chr3	+	6535	3	NIC	ENSMUSG00000034640.10	novel	4191	6	NA	NA	-2591	-379	intron_retention	FALSE	canonical	3	103	junction_2	2.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTGTTTTGTTCT	1321	False	NA	15	True	NA	NA	NA	65450869	65462560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_65455107_65459956_65460233_65460538
ES.21605.2	chr3	+	4188	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	5	-2	5	2	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAGTGTAATGAAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	65435835	65462941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.3	chr3	+	4673	1	NIC	ENSMUSG00000034640.10	novel	4191	6	NA	NA	16	-14499	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGAATTCTCAAAGCC	NA	False	NA	NA	False	NA	NA	NA	65435846	65440519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_65435800_65440500
ES.21605.4	chr3	+	2873	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	16	1302	16	-1302	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCACCAGCAAAATTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	65435846	65461637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.5	chr3	+	2221	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	16	1954	16	932	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTGGTACTACTAAG	NA	False	NA	NA	False	NA	NA	NA	65435846	65460985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.6	chr3	+	2007	7	NNC	ENSMUSG00000034640.10	novel	4191	6	NA	NA	-23	-379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.0060382510335	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTGTTTTGTTCT	NA	False	NA	15	True	NA	NA	NA	65435857	65462560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538_65460717_65462494
ES.21605.7	chr3	+	4586	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	32	-427	-18	427	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCCTAAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65435862	65463366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.8	chr3	+	4323	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	34	-166	-16	166	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGGCGTTTAGTGGCT	NA	False	NA	NA	False	AATGAA	-16	NA	65435864	65463105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ES.21605.9	chr3	+	2051	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	42	22425	-8	-14504	5prime_fragment	FALSE	canonical	3	135	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGTTTGAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	65435872	65440514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_65436054_65438644
ES.21606.1	chr3	+	1795	1	Intergenic	novelGene_17875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTCTGATAAATGTT	NA	False	NA	NA	False	NA	NA	NA	65550764	65552559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_65550800_65552600
ES.21607.1	chr3	+	4377	1	Intergenic	novelGene_17876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGACAGGACAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-40	NA	65557572	65561949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_65557600_65561900
ES.21608.1	chr3	+	471	3	Intergenic	novelGene_17877	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAGAGGCCTTCCAT	NA	False	NA	NA	False	AATAAA	-30	NA	65566879	65573247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_65567043_65568846_65568949_65573041
ES.21609.1	chr3	+	2025	4	NNC	ENSMUSG00000074579.15	novel	2354	13	NA	NA	-18	11579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.24933858267454	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGGTTATTTATACA	NA	False	NA	NA	False	AATAAA	-18	NA	65573630	65605179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_65573733_65576510_65576600_65591312_65591528_65603560
ES.21609.2	chr3	+	645	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	7	1809	0	146	multi-exon	FALSE	canonical	3	10	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGCGCTGGGATTA	NA	False	NA	NA	False	AATAAA	-32	NA	65573655	65591791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65573733_65576510_65576600_65591312
ES.2161.1	chr1	-	3701	18	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.3409155930156	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740035	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713586_188715202_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.10	chr1	-	3014	13	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	383	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	77.431824852576	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGTCTTCAGTT	NA	False	NA	-5	True	ATTAAA	-17	NA	188729530	188703294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719827_188727938_188728030_188728596_188728738_188729158_188729231_188729473
ES.2161.11	chr1	-	3941	18	FSM	ENSMUSG00000026608.14	ENSMUST00000193143.6	3934	18	-10	3	2	-3	multi-exon	FALSE	canonical	2	9	junction_3	47.3469853762777	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGTCTTCAGTT	NA	False	NA	-5	True	ATTAAA	-17	NA	188740035	188703294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708567_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.13	chr1	-	3801	18	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	62.7474203001626	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGTCTTCAGTT	NA	False	NA	-5	True	ATTAAA	-17	NA	188740043	188703294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708567_188708757_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.14	chr1	-	3791	17	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	162	junction_12	21.3921714652814	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGTCTTCAGTT	NA	False	NA	-5	True	ATTAAA	-17	NA	188740043	188703294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.17	chr1	-	3547	19	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	404	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	74.2490179508569	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTGTGTCTTCAGT	NA	False	NA	-6	True	ATTAAA	-16	NA	188739621	188703295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719830_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739422_188739510_188739553
ES.2161.18	chr1	-	3774	18	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-61	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	48.9146562761706	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCAGTGTGTCTTCAG	NA	False	NA	-7	True	ATTAAA	-15	NA	188740099	188703296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715195_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.19	chr1	-	3414	16	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	66.08344892802	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCAGTGTGTCTTCAG	NA	False	NA	-7	True	ATTAAA	-15	NA	188740029	188703296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188719712_188719829_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.2	chr1	-	3774	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-68	0	-67	0	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740105	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.20	chr1	-	3964	18	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	49.3654544888003	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCAGTGTGTCTTCAG	NA	False	NA	-7	True	ATTAAA	-15	NA	188740022	188703296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732802_188733539_188733586_188734101_188734156_188739726
ES.2161.21	chr1	-	3718	18	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.731443068898	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCAGTGTGTCTTCAG	NA	False	NA	-7	True	ATTAAA	-15	NA	188740046	188703296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704889_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.22	chr1	-	6159	4	NIC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	447	-72	intron_retention	FALSE	canonical	3	202	junction_2	14.2361043360417	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGCCAGTGGTTTCA	NA	False	NA	-36	True	AATAAA	-15	NA	188713558	188703363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706402_188706483_188710850_188713421
ES.2161.23	chr1	-	3884	17	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	-62	-72	intron_retention	TRUE	canonical	0	0	junction_2	65.4708606461684	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGCCAGTGGTTTCA	NA	False	NA	-36	True	AATAAA	-15	NA	188740100	188703363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706669_188708554_188708757_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.24	chr1	-	5503	7	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	-6668	-73	intron_retention	FALSE	canonical	1	2	junction_2	80.2795463088548	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTTGCCAGTGGTTTC	NA	False	NA	-37	True	AATAAA	-14	NA	188720673	188703364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188708757_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712
ES.2161.26	chr1	-	3491	19	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	391	-73	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	63.4565079015677	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTTGCCAGTGGTTTC	NA	False	NA	-37	True	AATAAA	-14	NA	188739634	188703364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739422_188739505_188739547
ES.2161.28	chr1	-	3744	18	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	-5	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	73.4390503591043	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTTGCCAGTGGTTTC	NA	False	NA	-37	True	AATAAA	-14	NA	188740043	188703364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708567_188708757_188710693_188710850_188713421_188713593_188715193_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.29	chr1	-	3624	18	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	0	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	49.446346442084	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTTGCCAGTGGTTT	NA	False	NA	-38	True	AATAAA	-13	NA	188740038	188703365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728021_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.3	chr1	-	3803	19	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	61.6756750176996	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740013	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708567_188708757_188708875_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.30	chr1	-	2518	16	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-22	54	intron_retention	FALSE	canonical	3	10	junction_8	50.0318121021238	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAACCAAGACCACTCC	NA	False	NA	NA	False	NA	NA	NA	188740060	188704393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.31	chr1	-	7820	16	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	4	12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	66.0993864486569	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATTACTCAAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	188740033	188705985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188706402_188706483_188706669_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188739505_188739548
ES.2161.32	chr1	-	2353	17	ISM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	-18	2753	-17	-47	5prime_fragment	FALSE	canonical	3	162	junction_12	18.4831003892745	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	188740055	188706044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.33	chr1	-	2450	17	NNC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	1	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.8484247885492	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	188740036	188706044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188706402_188706483_188706669_188708554_188708757_188710693_188710850_188713421_188713593_188715195_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.4	chr1	-	3581	17	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	48.7384601726398	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740103	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.5	chr1	-	3716	18	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	46.7422439581393	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740053	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706396_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ES.2161.6	chr1	-	5429	13	NIC	ENSMUSG00000026608.14	novel	3934	18	NA	NA	202	0	intron_retention	FALSE	canonical	2	9	junction_3	56.0051460929162	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188729711	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708567_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473
ES.2161.7	chr1	-	3770	19	NNC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.3194185493842	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740032	188703291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188732732_188732802_188733539_188733586_188734101_188734156_188739726
ES.21610.1	chr3	-	176	1	Intergenic	novelGene_17878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	65601636	65601460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_65601500_65601600
ES.21611.1	chr3	-	176	1	Intergenic	novelGene_17879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGAGCGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	65794636	65794460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_65794500_65794600
ES.21612.1	chr3	+	4618	1	FSM	ENSMUSG00000103041.2	ENSMUST00000195714.2	4279	1	-346	7	-346	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTGGCTCTGTTTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	65864832	65869450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_65864800_65869400
ES.21613.1	chr3	-	4895	12	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	2	256	intron_retention	FALSE	canonical	3	13	junction_8	60.6462442542715	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACAGCCTAATGCTAAGA	NA	False	NA	-23	True	ATTAAA	-32	NA	65865600	65853315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65860157_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.10	chr3	-	11322	3	NIC	ENSMUSG00000027829.16	novel	4134	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	148	junction_2	12.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865663	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65864384_65864921_65864997_65865228
ES.21613.11	chr3	-	6797	10	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	98	junction_7	37.1516744384455	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865687	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.12	chr3	-	3802	10	FSM	ENSMUSG00000027829.16	ENSMUST00000142153.8	3414	10	-30	-358	6	0	multi-exon	FALSE	canonical	3	90	junction_7	40.7042934611675	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865614	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.13	chr3	-	7532	10	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	98	junction_7	38.650699129639	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865622	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.14	chr3	-	4661	12	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	13	junction_8	60.6462442542715	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865622	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65860157_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.15	chr3	-	3996	9	NIC	ENSMUSG00000027829.16	novel	4134	10	NA	NA	28	0	intron_retention	FALSE	canonical	3	90	junction_6	42.5316058949107	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865555	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.16	chr3	-	6155	10	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	98	junction_7	38.6781592116274	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865681	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.17	chr3	-	3904	11	NNC	ENSMUSG00000027829.16	novel	4134	10	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_5	73.091996825918	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865647	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855825_65855916_65856022_65856111_65857643_65857896_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.18	chr3	-	3932	11	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	56	junction_7	53.5545516272893	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865674	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.19	chr3	-	3944	9	NIC	ENSMUSG00000027829.16	novel	3414	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	90	junction_6	43.1608546602126	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865667	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65856022_65856111_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.2	chr3	-	3861	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	2	253	intron_retention	FALSE	canonical	2	8	junction_6	69.714292972303	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTACAGCCTAATGCTA	NA	False	NA	-26	True	ATTAAA	-29	NA	65865600	65853318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.20	chr3	-	2312	12	FSM	ENSMUSG00000027829.16	ENSMUST00000129002.8	2229	12	-86	3	1	-3	multi-exon	FALSE	canonical	3	27	junction_8	57.4382888393569	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865669	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.21	chr3	-	3758	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	8	junction_6	73.945143840016	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865679	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.22	chr3	-	3215	10	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	5	-3	intron_retention	FALSE	canonical	3	56	junction_6	53.4175261385758	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865665	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65856022_65856111_65856212_65857900_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.23	chr3	-	2158	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	8	3	8	-3	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865662	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.24	chr3	-	2688	11	NNC	ENSMUSG00000027829.16	novel	2169	11	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.7765083450808	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865655	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65863736_65864384_65864921_65864997_65865228
ES.21613.25	chr3	-	2237	12	NNC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.3818882791935	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865666	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855205_65855309_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.26	chr3	-	2234	12	FSM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	-212	-41	5	-3	multi-exon	FALSE	canonical	3	56	junction_8	51.1618724254952	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865665	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.27	chr3	-	3047	10	NIC	ENSMUSG00000027829.16	novel	2169	11	NA	NA	8	-3	intron_retention	FALSE	canonical	3	90	junction_7	39.1350936571711	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865662	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.29	chr3	-	4708	12	NNC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	77.6464758157868	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865658	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857886_65857966_65858854_65858976_65860157_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.3	chr3	-	2399	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	12	-242	12	242	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAATTGAGCAAAGCTACA	NA	False	NA	-37	True	ATTAAA	-18	NA	65865658	65853329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.31	chr3	-	3990	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	12	-3	intron_retention	FALSE	canonical	3	27	junction_7	60.1910292319379	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865658	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.32	chr3	-	4828	8	NIC	ENSMUSG00000027829.16	novel	3414	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	90	junction_5	43.7712047737658	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTTCAAATATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	65865662	65853574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65856022_65856111_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.33	chr3	-	2244	12	NNC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	71.2999716017701	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTTCAAATATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	65865662	65853575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857886_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.34	chr3	-	4720	9	NNC	ENSMUSG00000027829.16	novel	3414	10	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_6	67.9098667352543	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTTCAAATATCTT	NA	False	NA	NA	False	AATAAA	-19	NA	65865619	65853575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65859004_65864273_65864384_65864921_65864997_65865228
ES.21613.35	chr3	-	2276	11	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	0	-5	intron_retention	FALSE	canonical	3	56	junction_7	51.0420414952223	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865602	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.36	chr3	-	2111	12	NNC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	75.4165293059949	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865456	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857886_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.37	chr3	-	2347	10	NIC	ENSMUSG00000027829.16	novel	2169	11	NA	NA	2	-5	intron_retention	FALSE	canonical	3	90	junction_7	40.6259662753081	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865600	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.38	chr3	-	2261	12	NNC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.6325313084365	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865638	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65854476_65854606_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.39	chr3	-	4442	10	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	-3	-5	intron_retention	FALSE	canonical	2	8	junction_6	66.6651851687239	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865623	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65858976_65864273_65864384_65864921_65864997_65865228
ES.21613.4	chr3	-	4125	11	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	-2	242	intron_retention	FALSE	canonical	3	56	junction_7	53.5545516272893	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAATTGAGCAAAGCTACA	NA	False	NA	-37	True	ATTAAA	-18	NA	65865622	65853329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.40	chr3	-	3604	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	1	-5	intron_retention	FALSE	canonical	2	8	junction_6	69.714292972303	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	65865601	65853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.41	chr3	-	6387	11	NIC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	5	-6	intron_retention	FALSE	canonical	3	13	junction_7	63.5732648209922	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGTTTCAAATATC	NA	False	NA	NA	False	AATAAA	-17	NA	65865665	65853577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65860157_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.43	chr3	-	3764	3	ISM	ENSMUSG00000027829.16	ENSMUST00000144810.8	896	11	6591	-1797	713	-6	intron_retention	FALSE	canonical	3	188	junction_2	8.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGTTTCAAATATC	NA	False	NA	NA	False	AATAAA	-17	NA	65857686	65853577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_65855430_65855682_65855825_65855916
ES.21613.44	chr3	-	2643	4	ISM	ENSMUSG00000027829.16	ENSMUST00000154585.8	2364	13	-1	7031	-1	-1748	5prime_fragment	FALSE	canonical	3	98	junction_1	31.1804782231162	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGTCATTGGAGTT	NA	False	NA	NA	False	TATAAA	-16	NA	65865591	65860602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.5	chr3	-	2403	12	NNC	ENSMUSG00000027829.16	novel	1981	12	NA	NA	3	237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	71.2999716017701	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTACCAATTGAGCAAAG	NA	False	NA	-42	True	ATTAAA	-13	NA	65865580	65853334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857886_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.6	chr3	-	5902	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	98	junction_8	37.3739213891184	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865681	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.7	chr3	-	6385	4	NIC	ENSMUSG00000027829.16	novel	2169	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	188	junction_3	13.8804418757713	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65860408	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65855211_65855317_65855430_65855682_65855825_65855916
ES.21613.8	chr3	-	4750	10	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	56	junction_6	53.8841922351955	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865600	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ES.21613.9	chr3	-	10065	7	NIC	ENSMUSG00000027829.16	novel	2169	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	148	junction_6	25.5304828696121	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865600	65853571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65864384_65864921_65864997_65865228
ES.21614.1	chr3	-	170	1	Intergenic	novelGene_17880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAGTGACAATGG	NA	False	NA	NA	False	NA	NA	NA	66350450	66350280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_66350300_66350400
ES.21615.1	chr3	+	173	1	Intergenic	novelGene_17881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66635944	66636117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_66635900_66636100
ES.21616.1	chr3	+	3175	1	Intergenic	novelGene_17882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	66765846	66769021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_66765800_66769000
ES.21617.1	chr3	+	3213	10	NNC	ENSMUSG00000034544.18	novel	1406	10	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.489356187978	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGACTGCTTCCTCCCT	NA	False	NA	17	True	AATAAA	-17	NA	66888692	67265730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66888815_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.10	chr3	+	3094	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	-26	-6	5	0	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	66893009	67265729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.11	chr3	+	1741	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	-4	396	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	112.580286851892	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCGATTTGTATCACG	NA	False	NA	11	True	AATAAA	-17	NA	66893013	67264288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262926_67263553
ES.21617.12	chr3	+	3530	12	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	167.221879623431	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGACTGCTTCCTC	NA	False	NA	14	True	AATAAA	-14	NA	66893015	67265727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903803_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67191096_67191211_67193038_67193249_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.13	chr3	+	1630	5	NNC	ENSMUSG00000034544.18	novel	3136	4	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	154.5202252134	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGACTCTGATCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	66893017	66992567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_66991555
ES.21617.16	chr3	+	3775	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_1	110.318218690296	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893018	67265723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806
ES.21617.17	chr3	+	3208	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	103.881461410068	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTTCCTCCCTTC	NA	False	NA	19	True	AATAAA	-19	NA	66893018	67265732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66903803_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.18	chr3	+	3284	11	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	140.896593287418	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCATTTGTTTT	NA	False	NA	-34	True	AATAAA	-15	NA	66893018	67265679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67104322_67104446_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.19	chr3	+	1774	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	14	1436	1	400	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGATTTGTATCACGCGTT	NA	False	NA	15	True	AATAAA	-21	NA	66893018	67264292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.2	chr3	+	3249	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	-19	-6	-17	5	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTTCCTCCCTTCGT	NA	False	NA	21	True	AATAAA	-21	NA	66892985	67265734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.20	chr3	+	3153	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	111.457792487438	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGACTGCTTCCTCCCTT	NA	False	NA	18	True	AATAAA	-18	NA	66893018	67265731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66901986_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.21	chr3	+	3203	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	110.885326150738	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGACTGCTTCCTCCCTT	NA	False	NA	18	True	AATAAA	-18	NA	66893018	67265731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893130_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.22	chr3	+	3192	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.977655389391	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893019	67265723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903809_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.23	chr3	+	2364	9	ISM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	15	1439	2	397	intron_retention	FALSE	canonical	3	299	junction_4	33.1754333053843	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCGATTTGTATCACGC	NA	False	NA	12	True	AATAAA	-18	NA	66893019	67264289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806
ES.21617.24	chr3	+	2685	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	-16	393	2	-393	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGGCCCATGTGGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	66893019	67265330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.25	chr3	+	3188	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	104.560455665079	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGACTGCTTCCTCCCTT	NA	False	NA	18	True	AATAAA	-18	NA	66893019	67265731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.26	chr3	+	2928	8	NIC	ENSMUSG00000034544.18	novel	3062	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	149.333211856122	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTGACTGCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	66893019	67265726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67263553
ES.21617.27	chr3	+	2786	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	3	-393	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	104.560455665079	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGGCCCATGTGGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	66893020	67265330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893116_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.28	chr3	+	3055	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	114.309270730768	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGACTGCTTCCTCC	NA	False	NA	15	True	AATAAA	-15	NA	66893020	67265728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67263553
ES.21617.29	chr3	+	1754	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	7	398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.977655389391	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGATTTGTATCACGCG	NA	False	NA	13	True	AATAAA	-19	NA	66893024	67264290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903809_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.3	chr3	+	2837	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	-6	393	-4	-388	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCATGTGGTTGTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	66892998	67265335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.32	chr3	+	1242	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	5	44	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	114.309270730768	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTACAAAGTCATGGT	NA	False	NA	NA	False	AATAAA	-28	NA	66893041	67263936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67263553
ES.21617.33	chr3	+	3145	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	119.440361687329	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893041	67265723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.34	chr3	+	511	4	FSM	ENSMUSG00000034544.18	ENSMUST00000162620.9	3136	4	42	2583	23	-2583	multi-exon	FALSE	canonical	3	306	junction_2	33.0689515339624	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAGAGAAAAGGA	NA	False	NA	-2	True	NA	NA	NA	66893059	66989977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868
ES.21617.35	chr3	+	3099	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	117.974308643874	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTGACTGCTTCCTC	NA	False	NA	14	True	AATAAA	-14	NA	66893059	67265727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67257241_67257349_67262806_67262960_67263553
ES.21617.36	chr3	+	3210	10	FSM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	-3	6	-3	0	multi-exon	FALSE	canonical	1	6	junction_1	109.678092391404	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893296	67265723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893423_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.37	chr3	+	3370	10	NNC	ENSMUSG00000034544.18	novel	3213	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.342337471669	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893299	67265723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893620_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262926_67263553
ES.21617.38	chr3	+	3307	10	NIC	ENSMUSG00000034544.18	novel	3213	10	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	108.773408151936	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACACTGTGACTGCTTCC	NA	False	NA	12	True	AATAAA	-12	NA	66893300	67265725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893522_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.39	chr3	+	1466	10	NIC	ENSMUSG00000034544.18	novel	3213	10	NA	NA	8	10	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	108.773408151936	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATGAACACTCAGTA	NA	False	NA	NA	False	AATAAA	-27	NA	66893318	67263902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893522_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.4	chr3	+	1403	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	1	44	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	135.779232579949	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTACAAAGTCATGGT	NA	False	NA	NA	False	AATAAA	-28	NA	66893003	67263936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893116_66901849_66902046_66903803_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.40	chr3	+	3094	9	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	8547	-1	3542	1	3prime_fragment	FALSE	canonical	3	299	junction_3	32.6113477182407	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGACTGCTTCCTCCCT	NA	False	NA	17	True	AATAAA	-17	NA	66901846	67265730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.41	chr3	+	3862	1	Intergenic	novelGene_17886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGACTCGCTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	67007197	67011059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_67007200_67011100
ES.21617.42	chr3	+	1529	2	NNC	ENSMUSG00000034544.18	novel	2736	8	NA	NA	215453	123487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACAGGTGTCTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	67113757	67116047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67113811_67114571
ES.21617.43	chr3	+	3295	3	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	363080	3	358075	-2	3prime_fragment	FALSE	canonical	3	336	junction_2	26.5	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTGACTGCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	67256379	67265726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67257349_67262806_67262960_67263553
ES.21617.44	chr3	+	3524	1	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	362462	398	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGATTTGTATCACGCG	NA	False	NA	13	True	AATAAA	-19	NA	67260766	67264290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67260800_67264300
ES.21617.45	chr3	+	4629	1	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	362793	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTGACTGCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	67261097	67265726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67261100_67265700
ES.21617.46	chr3	+	4083	1	Genic_Genomic	ENSMUSG00000034544.18	novel	NA	NA	NA	NA	364873	1531	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTCTTTCTTCATAA	NA	False	NA	NA	False	NA	NA	NA	67263177	67267260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_67263200_67267300
ES.21617.5	chr3	+	3407	5	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	2	18497	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	153.669287757834	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGGACTCGCTGATCC	NA	False	NA	NA	False	NA	NA	NA	66893006	67011057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67008279
ES.21617.6	chr3	+	1430	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	2	1792	2	44	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTACAAAGTCATGGT	NA	False	NA	NA	False	AATAAA	-28	NA	66893006	67263936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.7	chr3	+	4942	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	23	junction_1	110.903040422704	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAACACTGTGACTGCT	NA	False	NA	9	True	AATAAA	-9	NA	66893008	67265722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_66893116_66901849_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.8	chr3	+	1719	10	NNC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	5	396	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	111.457792487438	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCGATTTGTATCACG	NA	False	NA	11	True	AATAAA	-17	NA	66893009	67264288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_66893140_66901849_66901986_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ES.21617.9	chr3	+	3811	9	ISM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	5	2	5	-2	intron_retention	FALSE	canonical	3	299	junction_4	33.1754333053843	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGTGACTGCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	66893009	67265726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806
ES.21618.1	chr3	-	3132	5	FSM	ENSMUSG00000027833.17	ENSMUST00000029422.14	3079	5	4	-57	4	2	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTCCTTTTTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	66889100	66879057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_66881277_66882776_66882866_66883185_66883244_66885518_66885728_66888543
ES.21619.1	chr3	-	203	1	Intergenic	novelGene_17883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACACAAAAGAGAGCCAAAT	NA	False	NA	NA	False	NA	NA	NA	66897654	66897451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_66897500_66897700
ES.2162.1	chr1	-	2322	2	NNC	ENSMUSG00000037624.16	novel	3131	6	NA	NA	4494	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGCTCTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	188942920	188940133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_188942305_188942769
ES.21620.1	chr3	-	240	1	Intergenic	novelGene_17884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAAGTACACATGC	NA	False	NA	NA	False	NA	NA	NA	66906362	66906122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_66906100_66906400
ES.21621.1	chr3	-	7606	1	Intergenic	novelGene_17885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAAACTAATTTACTGT	NA	False	NA	NA	False	NA	NA	NA	67007412	66999806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_66999800_67007400
ES.21622.1	chr3	-	180	1	Intergenic	novelGene_17887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAGTCCTAACTT	NA	False	NA	NA	False	NA	NA	NA	67232876	67232696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_67232700_67232900
ES.21623.1	chr3	+	1125	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	0	-11	0	6	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGGTCAACCGTCTAT	NA	False	NA	12	True	AATAAA	-25	NA	67281429	67307342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ES.21624.10	chr3	+	4052	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	26	0	6	0	multi-exon	FALSE	canonical	0	0	junction_6	154.691388272057	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337454	67383862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.11	chr3	+	2591	18	NNC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	9	263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	154.691388272057	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATATATAATATTATAT	NA	False	NA	NA	False	AGTAAA	-30	NA	67337457	67382400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347590_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.12	chr3	+	5397	17	NIC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	13	241	intron_retention	FALSE	canonical	0	0	junction_5	159.32689224908	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTATATTATTAC	NA	False	NA	NA	False	AGTAAA	-8	NA	67337461	67382378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.13	chr3	+	3986	17	NIC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	186.187814702654	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTTTCTTCCTGCTT	NA	False	NA	9	True	ATTAAA	-23	NA	67337461	67383860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.14	chr3	+	6313	17	NIC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_6	159.158676719179	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTTCTTCCTGCTTC	NA	False	NA	10	True	ATTAAA	-24	NA	67337461	67383861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.2	chr3	+	2706	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	-3	1375	-3	350	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATAAGGGCTGTGTGT	NA	False	NA	NA	False	TATAAA	-26	NA	67337425	67382487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.20	chr3	+	3151	10	ISM	ENSMUSG00000027774.17	ENSMUST00000161009.7	1971	14	22	5678	22	-5678	5prime_fragment	FALSE	canonical	0	0	junction_6	184.912859023105	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGATGGCTCAGCAGT	NA	False	NA	NA	False	AATAAA	-12	NA	67337470	67360460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631
ES.21624.22	chr3	+	2411	17	NIC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	25	241	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	185.496251646765	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTATATTATTAC	NA	False	NA	NA	False	AGTAAA	-8	NA	67337473	67382378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.23	chr3	+	2588	18	NNC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	39	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	178.531243328138	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTTTTTTTTTGG	NA	False	NA	NA	False	TATAAA	-9	NA	67337487	67382470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67337656_67338982_67339097_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.24	chr3	+	2536	17	NNC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	39	261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	186.692082300643	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTATATATAATATTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	67337487	67382398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358772_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.25	chr3	+	4008	18	NNC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	180.075147712086	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337487	67383862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365231_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.26	chr3	+	2238	16	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	3257	1462	3237	263	3prime_fragment	FALSE	canonical	0	0	junction_4	161.834757975192	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATATATAATATTATAT	NA	False	NA	NA	False	AGTAAA	-30	NA	67340685	67382400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.27	chr3	+	3956	14	ISM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	7841	13	7821	-13	3prime_fragment	FALSE	canonical	0	0	junction_2	172.408555643772	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTTCTCTTATTCTTTT	NA	False	NA	-2	True	ATTAAA	-12	NA	67345269	67383849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.29	chr3	+	3272	10	NNC	ENSMUSG00000027774.17	novel	924	7	NA	NA	-6543	263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	234.621102478859	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATATATAATATTATAT	NA	False	NA	NA	False	AGTAAA	-30	NA	67357268	67382400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67357498_67358631_67358734_67359484_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376525_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.30	chr3	+	4971	7	FSM	ENSMUSG00000027774.17	ENSMUST00000160529.2	924	7	-3780	-267	-3780	267	multi-exon	FALSE	canonical	3	431	junction_3	36.975968171533	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATAATATTATATAAGG	NA	False	NA	NA	False	AGTAAA	-34	NA	67360031	67382404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ES.21624.31	chr3	+	4858	3	NIC	ENSMUSG00000027774.17	novel	924	7	NA	NA	12691	264	intron_retention	FALSE	canonical	3	531	junction_2	8	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATAATATTATATA	2323	False	NA	NA	False	AGTAAA	-31	NA	67376502	67382401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67380957_67381885_67381940_67382051
ES.21625.1	chr3	-	2872	1	Intergenic	novelGene_17888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACGAGAAGAAAAATAGGTA	NA	False	NA	NA	False	NA	NA	NA	67356072	67353200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_67353200_67356100
ES.21626.1	chr3	-	1143	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	-30	-1	-30	1	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCTAATTGCATTGTAT	NA	False	NA	-2	True	AATAAA	-19	NA	67371289	67365329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
ES.21626.2	chr3	-	3378	5	NIC	ENSMUSG00000047557.3	novel	1112	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	160	junction_3	6.02079728939615	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCTAATTGCATTGTAT	NA	False	NA	-2	True	AATAAA	-19	NA	67371259	67365329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_67365661_67365926_67368392_67368644_67368823_67369691_67369755_67370918
ES.21626.3	chr3	-	2902	4	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	20	721	20	-718	5prime_fragment	FALSE	canonical	3	160	junction_2	2.86744175568088	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATGTCATTTTTGCCA	NA	False	NA	NA	False	AATAAA	-24	NA	67371239	67366051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_67368392_67368644_67368823_67369691_67369755_67370918
ES.21627.1	chr3	+	156	1	Intergenic	novelGene_17889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAATCTAAAA	8620	False	NA	NA	False	NA	NA	NA	67438762	67438918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_67438800_67438900
ES.21628.1	chr3	-	1139	3	FSM	ENSMUSG00000103718.2	ENSMUST00000195865.2	421	3	-35	-683	-35	683	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTCTTGGTGCATCT	3357	False	NA	NA	False	NA	NA	NA	67460793	67457978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_67458833_67460133_67460255_67460629
ES.21629.1	chr3	+	1632	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	-31	1410	-31	-1410	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCAGACTATCTTAG	NA	False	NA	NA	False	AATATA	-31	NA	67490042	67510160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.10	chr3	+	2007	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	7	997	7	-997	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGGCTACCTATATACA	NA	False	NA	NA	False	AATAAA	-16	NA	67490080	67510573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.11	chr3	+	7314	12	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	7	-2	intron_retention	FALSE	canonical	3	661	junction_3	70.4831027168572	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	17	True	AATAAA	-18	NA	67490080	67511568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67504084_67505360_67507974_67508654_67508713_67510027
ES.21629.13	chr3	+	1885	15	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	14	-999	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	226.291722954135	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATGGCTACCTATATA	NA	False	NA	NA	False	AATAAA	-14	NA	67490087	67510571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507925_67507974_67508654_67508713_67510027
ES.21629.14	chr3	+	6157	12	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	18	-1148	intron_retention	FALSE	canonical	3	661	junction_3	70.4831027168572	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTGTGTCCTAGAG	NA	False	NA	6	True	AATAAA	-17	NA	67490091	67510422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67504084_67505360_67507974_67508654_67508713_67510027
ES.21629.16	chr3	+	6464	13	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	24	-2	intron_retention	FALSE	canonical	3	740	junction_11	51.4605431374369	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	17	True	AATAAA	-18	NA	67490097	67511568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654
ES.21629.18	chr3	+	3503	15	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	42	-6	intron_retention	FALSE	canonical	3	661	junction_4	66.3006833467416	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTTGGAGGATAAAT	NA	False	NA	13	True	AATAAA	-14	NA	67490115	67511564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507974_67508654_67508713_67510027
ES.21629.19	chr3	+	4245	15	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	42	-1	intron_retention	FALSE	canonical	3	661	junction_4	71.5815504676096	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAGGATAAATGACTG	NA	False	NA	18	True	AATAAA	-19	NA	67490115	67511569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.2	chr3	+	3065	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	-28	-26	-28	26	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCCCTTCTGGGTCTCC	NA	False	NA	45	True	GATAAA	-14	NA	67490045	67511596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.22	chr3	+	2784	17	NNC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	213.853036204189	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTGGAGGATAAATG	NA	False	NA	14	True	AATAAA	-15	NA	67490122	67511565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027_67510239_67510411
ES.21629.25	chr3	+	2113	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	59	839	59	-839	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCATTGAATAGTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	67490132	67510731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.26	chr3	+	3008	16	NNC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	59	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	217.140466569965	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCTATTTGGAGGATA	NA	False	NA	10	True	AATAAA	-11	NA	67490132	67511561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508778_67510027
ES.21629.27	chr3	+	5782	13	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	59	-1148	intron_retention	FALSE	canonical	3	740	junction_10	55.8276116471251	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTGTGTCCTAGAG	NA	False	NA	6	True	AATAAA	-17	NA	67490132	67510422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.28	chr3	+	2819	15	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	71	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	226.291722954135	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCTATTTGGAGGATAA	NA	False	NA	11	True	AATAAA	-12	NA	67490144	67511562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507925_67507974_67508654_67508713_67510027
ES.21629.29	chr3	+	5538	14	NNC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	77	-1148	intron_retention	TRUE	non_canonical	0	0	junction_5	234.136889106003	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTGTGTCCTAGAG	NA	False	NA	6	True	AATAAA	-17	NA	67490150	67510422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67490311_67491976_67492030_67492930_67495319_67497163_67497273_67499902_67500112_67500149_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.3	chr3	+	5388	14	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	-27	-4	intron_retention	FALSE	canonical	3	661	junction_4	68.2927911674709	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTTGGAGGATAAATGA	NA	False	NA	15	True	AATAAA	-16	NA	67490046	67511566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67507974_67508654_67508713_67510027
ES.21629.30	chr3	+	1612	13	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	4559	997	2554	-997	3prime_fragment	FALSE	canonical	3	661	junction_1	74.9100849908297	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGGCTACCTATATACA	NA	False	NA	NA	False	AATAAA	-16	NA	67494632	67510573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.31	chr3	+	2603	13	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	4559	6	2554	-6	3prime_fragment	FALSE	canonical	3	661	junction_1	74.9100849908297	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTTGGAGGATAAAT	NA	False	NA	13	True	AATAAA	-14	NA	67494632	67511564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.32	chr3	+	2630	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	5808	1149	3803	-1149	3prime_fragment	FALSE	canonical	3	740	junction_8	54.3540246899896	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACTCACTGTGTCCTAGA	NA	False	NA	5	True	AATAAA	-16	NA	67495881	67510421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.33	chr3	+	2493	11	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	7085	9	5080	-9	3prime_fragment	FALSE	canonical	3	740	junction_8	54.3540246899896	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCTATTTGGAGGATA	NA	False	NA	10	True	AATAAA	-11	NA	67497158	67511561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.34	chr3	+	2186	8	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	12025	2	10020	-2	3prime_fragment	FALSE	canonical	3	740	junction_5	59.2655731708157	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	17	True	AATAAA	-18	NA	67502098	67511568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.35	chr3	+	6440	2	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	13778	2	11773	-2	intron_retention	FALSE	canonical	3	855	junction_1	0	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAGGATAAATGACT	NA	False	NA	17	True	AATAAA	-18	NA	67503851	67511568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_67504084_67505360
ES.21629.5	chr3	+	3030	16	NNC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	219.600202388087	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTTGGAGGATAAAT	NA	False	NA	13	True	AATAAA	-14	NA	67490061	67511564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507259_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.6	chr3	+	1875	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	-10	1146	-10	-1146	multi-exon	FALSE	canonical	3	661	junction_4	69.2886394407882	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTGTGTCCTAGAGAA	NA	False	NA	8	True	AATAAA	-19	NA	67490063	67510424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.21629.7	chr3	+	4220	14	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	0	-1145	intron_retention	FALSE	canonical	3	661	junction_4	68.2927911674709	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTGTCCTAGAGAAC	NA	False	NA	9	True	AATAAA	-20	NA	67490073	67510425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67507974_67508654_67508713_67510027
ES.21629.8	chr3	+	4790	13	NIC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	1	-1148	intron_retention	FALSE	canonical	3	779	junction_2	45.1598242049526	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACTGTGTCCTAGAG	NA	False	NA	6	True	AATAAA	-17	NA	67490074	67510422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67507974_67508654_67508713_67510027
ES.21629.9	chr3	+	2886	15	NNC	ENSMUSG00000027775.10	novel	3011	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	228.15507839169	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAGGATAAATGACTG	NA	False	NA	18	True	AATAAA	-19	NA	67490075	67511569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_67490311_67491976_67492021_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ES.2163.1	chr1	+	178	1	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	188954921	188955099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_188954900_188955100
ES.21630.1	chr3	+	4571	1	Intergenic	novelGene_17890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	68022304	68026875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68022300_68026900
ES.21631.1	chr3	+	179	1	Intergenic	novelGene_17891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	68280157	68280336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68280200_68280300
ES.21632.1	chr3	+	2070	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	-27	16	-27	1	multi-exon	FALSE	canonical	3	12	junction_1	163.233149894529	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCCTTTTGCTCACTAAC	NA	False	NA	23	True	AATAAA	-25	NA	68375488	68533798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.11	chr3	+	1749	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	45	362	45	-362	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTACAGTACTTAAACC	NA	False	NA	NA	False	AATAAA	-14	NA	68401585	68533434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.13	chr3	+	2892	7	NIC	ENSMUSG00000027777.16	novel	2156	8	NA	NA	48	-3	intron_retention	FALSE	canonical	3	304	junction_1	75.5424825291482	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACGTCCTTTTGCTCA	NA	False	NA	18	True	AATAAA	-20	NA	68401588	68533793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68526053_68528305_68528400_68533139
ES.21632.14	chr3	+	2260	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	26122	21	97	-3	3prime_fragment	FALSE	canonical	3	341	junction_1	53.0830062784273	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACGTCCTTTTGCTCA	NA	False	NA	18	True	AATAAA	-20	NA	68401637	68533793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.15	chr3	+	1659	3	NIC	ENSMUSG00000027777.16	novel	2156	8	NA	NA	151	-16	intron_retention	FALSE	canonical	0	0	junction_2	170.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTTCATATGATAC	NA	False	NA	5	True	AATAAA	-7	NA	68401691	68533780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68402591_68503482_68503602_68533139
ES.21632.16	chr3	+	1887	6	NIC	ENSMUSG00000027777.16	novel	2201	8	NA	NA	272	-3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	185.543094724649	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACGTCCTTTTGCTCA	NA	False	NA	18	True	AATAAA	-20	NA	68401812	68533793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68402591_68503482_68503602_68523772_68523891_68525928_68526053_68528305_68528400_68533139
ES.21632.17	chr3	+	159	1	Intergenic	novelGene_17894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGAATTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	68450878	68451037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68450900_68451000
ES.21632.18	chr3	+	5387	2	Intergenic	novelGene_17896	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTTGATAAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	68465962	68477922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68466825_68473397
ES.21632.19	chr3	+	931	2	Intergenic	novelGene_17897	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTTGATAAATGTCTT	8719	False	NA	NA	False	NA	NA	NA	68476904	68477922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68477139_68477225
ES.21632.2	chr3	+	2299	8	NIC	ENSMUSG00000027777.16	novel	1298	6	NA	NA	-192	-2	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	160.899004956272	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACGTCCTTTTGCTCAC	NA	False	NA	19	True	AATAAA	-21	NA	68400631	68533794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68400939_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.20	chr3	+	1612	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	118	0	118	0	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68479695	68533797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.21	chr3	+	6301	6	ISM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	167	2	167	-1	intron_retention	FALSE	canonical	3	114	junction_1	146.537367248085	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTCCTTTTGCTCACT	NA	False	NA	20	True	AATAAA	-22	NA	68479744	68533795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305
ES.21632.22	chr3	+	1356	6	NIC	ENSMUSG00000027777.16	novel	1730	7	NA	NA	168	-7	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	211.00521320574	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGATACGTCCTTTTG	NA	False	NA	14	True	AATAAA	-16	NA	68479745	68533789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68479997_68503482_68503602_68523772_68523891_68525928_68526053_68528305_68528400_68533139
ES.21632.23	chr3	+	1194	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	170	366	170	-365	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTGTACAGTACTTAA	NA	False	NA	NA	False	AATAAA	-11	NA	68479747	68533431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.25	chr3	+	2636	1	Genic_Genomic	ENSMUSG00000027777.16	novel	NA	NA	NA	NA	-1237	-12586	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTCAAATTAAAAAAAAAAAA	697	False	NA	NA	False	NA	NA	NA	68490274	68492910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_68490300_68492900
ES.21632.26	chr3	+	176	1	Intergenic	novelGene_17899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAAGGGATT	NA	False	NA	NA	False	NA	NA	NA	68524023	68524199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68524000_68524200
ES.21632.3	chr3	+	1236	2	ISM	ENSMUSG00000027777.16	ENSMUST00000192555.6	1298	6	-96	123061	-96	-102565	5prime_fragment	FALSE	canonical	2	19	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCAGTGCCTGCGGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	68400727	68402931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68400939_68401906
ES.21632.4	chr3	+	2195	8	NNC	ENSMUSG00000027777.16	novel	2201	8	NA	NA	-348	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.242217109417	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCCTTTTGCTCACTAAC	NA	False	NA	23	True	AATAAA	-25	NA	68401192	68533798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68401392_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.5	chr3	+	2188	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	-11	-21	-11	3	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCACTGGCTGTGTCTCC	NA	False	NA	42	True	AATAAA	-44	NA	68401529	68533817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.6	chr3	+	2115	8	NNC	ENSMUSG00000027777.16	novel	2156	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	167.70041315223	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68401542	68533796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68401703_68401906_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.7	chr3	+	2078	8	NNC	ENSMUSG00000027777.16	novel	2156	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	166.239070532257	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68401544	68533796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68401629_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.8	chr3	+	3864	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	5	-1713	5	1695	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTTGGGGTTTTTTA	NA	False	NA	NA	False	AAAACA	-15	NA	68401545	68535509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ES.21632.9	chr3	+	2260	9	NNC	ENSMUSG00000027777.16	novel	2156	8	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	195.414303468298	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACGTCCTTTTGCTCA	NA	False	NA	18	True	AATAAA	-20	NA	68401570	68533793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68532894_68533032_68533139
ES.21633.1	chr3	-	1968	1	Intergenic	novelGene_17892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAAGACAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	68394021	68392053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_68392100_68394000
ES.21634.1	chr3	-	178	1	Intergenic	novelGene_17893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	68394430	68394252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_68394300_68394400
ES.21635.1	chr3	-	5756	1	Antisense	novelGene_ENSMUSG00000102422.2_AS_novelGene_ENSMUSG00000027777.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATAGGGGCCAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	68402633	68396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_68396900_68402600
ES.21635.2	chr3	-	5476	1	Antisense	novelGene_ENSMUSG00000102422.2_AS_novelGene_ENSMUSG00000027777.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTTTGAGTTATTAA	NA	False	NA	NA	False	AATAAA	-14	NA	68402800	68397324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_68397300_68402800
ES.21636.1	chr3	-	7223	2	Antisense	novelGene_ENSMUSG00000027777.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTGAGACAAGTACAAAC	NA	False	NA	NA	False	NA	NA	NA	68411893	68403422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_68407455_68408702
ES.21637.1	chr3	-	2224	1	Intergenic	novelGene_17895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	68458243	68456019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_68456000_68458200
ES.21638.1	chr3	-	176	1	Intergenic	novelGene_17898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	68506410	68506234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_68506200_68506400
ES.21639.1	chr3	+	3885	5	Intergenic	novelGene_17900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTTGGCCCAAATC	NA	False	NA	NA	False	AATAAA	-43	NA	68713289	68733548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68713481_68717500_68717809_68719617_68721922_68723652_68723756_68732569
ES.2164.1	chr1	+	165	2	Antisense	novelGene_ENSMUSG00000037624.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	188971834	188973883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_188971943_188973826
ES.21640.1	chr3	-	177	1	Intergenic	novelGene_17901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7081	False	NA	NA	False	NA	NA	NA	68754337	68754160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_68754200_68754300
ES.21641.1	chr3	+	2903	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	-326	1	-326	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGTGCATTTTTAT	NA	False	NA	NA	False	ATTAAA	-43	NA	68776592	68779495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68776600_68779500
ES.21642.1	chr3	-	2749	1	FSM	ENSMUSG00000091272.3	ENSMUST00000166328.2	2350	1	-399	0	-399	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGCATACCAGTTTCA	8857	False	NA	NA	False	AATAAA	-30	NA	68777998	68775249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68775200_68778000
ES.21643.1	chr3	+	4124	3	Antisense	novelGene_ENSMUSG00000111756.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	68822570	68838825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_68825959_68835059_68835125_68838154
ES.21644.1	chr3	+	226	1	Intergenic	novelGene_17902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACAAACAAGCCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	68881315	68881541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68881300_68881500
ES.21645.1	chr3	+	4594	23	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	-133	-2	intron_retention	FALSE	canonical	3	15	junction_2	210.177281525434	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68911937	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940592_68941270_68941455_68941706
ES.21645.14	chr3	+	4058	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	250.15264904871	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912308	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935217_68935773_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940046_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.15	chr3	+	3603	7	NIC	ENSMUSG00000034349.15	novel	1163	8	NA	NA	6	267	intron_retention	FALSE	canonical	3	521	junction_2	62.6562491341092	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTTTTGTTGTC	NA	False	NA	NA	False	TTTAAA	-13	NA	68912308	68926927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403
ES.21645.16	chr3	+	2981	19	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	238	3144	6	-1604	5prime_fragment	FALSE	canonical	3	521	junction_3	118.624056020129	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTAAAGACAGAGCTAA	NA	False	NA	NA	False	AATAAA	-22	NA	68912308	68938812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740
ES.21645.17	chr3	+	3907	23	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.224377082129	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912309	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912429_68913408_68913547_68915255_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.2	chr3	+	4424	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	-91	-17	-91	17	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTGATAATGTCTT	NA	False	NA	37	True	TATAAA	-38	NA	68911979	68941973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.21	chr3	+	6290	23	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_7	210.221901651289	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912309	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68926220_68926260_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.22	chr3	+	3960	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	208.147831717679	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912309	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923484_68923994_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.23	chr3	+	3883	23	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	206.330198532465	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912309	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.24	chr3	+	4692	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	7	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	206.102494369319	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912309	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925992_68926337_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.25	chr3	+	3280	20	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	273.784748740063	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAAATTGAATGACAAGT	NA	False	NA	8	True	TATAAA	-9	NA	68912310	68941944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68923413_68923484_68925416_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.26	chr3	+	4087	24	FSM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	-30	0	8	0	multi-exon	FALSE	canonical	3	15	junction_2	205.937434292797	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912310	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.27	chr3	+	3976	24	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_2	248.144745551465	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACAAGTTTCCTGTT	NA	False	NA	16	True	TATAAA	-17	NA	68912310	68941952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923484_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.28	chr3	+	5061	23	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	8	0	intron_retention	FALSE	canonical	3	521	junction_2	143.517910017767	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912310	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.3	chr3	+	3872	21	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-86	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.191979687614	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTTTTATTTGAGT	NA	False	NA	26	True	TATAAA	-27	NA	68911984	68941962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68923413_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.31	chr3	+	1781	11	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	242	12164	10	1059	5prime_fragment	FALSE	canonical	3	521	junction_3	54.2638000880882	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTACTTCTGTATTTC	NA	False	NA	NA	False	TATAAA	-38	NA	68912312	68929792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558
ES.21645.33	chr3	+	4005	24	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-6	6	combination_of_known_junctions	FALSE	canonical	1	14	junction_13	206.074884988594	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTTTTATTTGAGT	NA	False	NA	26	True	TATAAA	-27	NA	68912317	68941962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934895_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.34	chr3	+	6599	22	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-6	0	intron_retention	FALSE	canonical	3	521	junction_3	141.344900694652	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912317	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.36	chr3	+	4057	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.062753660846	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912318	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912420_68913408_68913547_68914521_68914701_68915261_68915454_68916823_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.37	chr3	+	4056	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	206.102494369319	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACAAGTTTCCTGTT	NA	False	NA	16	True	TATAAA	-17	NA	68912318	68941952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925537_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.38	chr3	+	3519	21	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.191979687614	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912319	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68923423_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.4	chr3	+	4076	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-84	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.613953951165	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAAGTTTCCTGTTT	NA	False	NA	17	True	TATAAA	-18	NA	68911986	68941953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912129_68913434_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.40	chr3	+	3887	23	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	257.245147895354	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912322	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.43	chr3	+	3974	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	251.41698243122	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912323	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925528_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934895_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.46	chr3	+	3881	23	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	256.859871917847	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAAGTTTCCTGTTT	NA	False	NA	17	True	TATAAA	-18	NA	68912323	68941953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.47	chr3	+	4069	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	207.155001646097	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912325	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928742_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.48	chr3	+	4812	23	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	6	0	intron_retention	FALSE	canonical	1	14	junction_12	209.654108095506	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912329	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68929793_68931497_68931684_68933156_68933319_68934895_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.49	chr3	+	4974	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	206.102494369319	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68912332	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68926229_68926269_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.50	chr3	+	3543	21	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	267.014250556033	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912332	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912449_68913408_68913547_68923413_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.51	chr3	+	4031	24	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	207.759039575947	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACAAGTTTCCTGTT	NA	False	NA	16	True	TATAAA	-17	NA	68912333	68941952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925421_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.52	chr3	+	4297	23	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	271	0	1	0	intron_retention	FALSE	canonical	3	521	junction_3	132.146925493389	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912341	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270
ES.21645.53	chr3	+	5038	23	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	1	2	intron_retention	FALSE	canonical	3	15	junction_1	209.974358922604	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAAGTTTCCTGTTT	NA	False	NA	17	True	TATAAA	-18	NA	68912341	68941953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.59	chr3	+	3752	22	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	215.105194958093	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912361	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68926511_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.6	chr3	+	3934	23	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	212.63774339791	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912287	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.62	chr3	+	4364	20	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	2270	0	intron_retention	FALSE	canonical	1	2	junction_14	226.083172987362	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68914617	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.64	chr3	+	3456	20	ISM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	4474	0	4467	0	3prime_fragment	FALSE	canonical	3	577	junction_4	142.699983596914	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68916814	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.65	chr3	+	4248	20	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	4595	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	220.423993344884	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68916942	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68916994_68923425_68923591_68923984_68924113_68925403_68926220_68926260_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.66	chr3	+	9409	19	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	4968	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	282.460922676936	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68917315	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68923591_68923984_68924113_68925403_68925663_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933250_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.67	chr3	+	7373	21	Fusion	ENSMUSG00000034349.15_ENSMUSG00000065606.3	novel	756	4	NA	NA	82	0	multi-exon	FALSE	canonical	0	0	junction_1	269.699439191111	732	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68917316	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_68921271_68922279_68922422_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.68	chr3	+	3969	1	FSM	ENSMUSG00000065606.3	ENSMUST00000083672.3	95	1	84	-3958	84	3958	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCCGTAGCAATCCC	NA	False	NA	NA	False	NA	NA	NA	68917318	68921287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_68917300_68921300
ES.21645.69	chr3	+	8167	19	ISM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	6195	0	-5287	0	3prime_fragment	FALSE	canonical	3	577	junction_3	144.818330212139	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68918535	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.7	chr3	+	4119	24	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	204.478940360712	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912292	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912449_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.70	chr3	+	4232	16	NNC	ENSMUSG00000034349.15	novel	756	4	NA	NA	-2109	0	intron_retention	FALSE	non_canonical	0	0	junction_1	235.102776579851	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68921713	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68922735_68926391_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270
ES.21645.71	chr3	+	5130	18	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-779	-2	intron_retention	FALSE	canonical	3	577	junction_3	146.928601166793	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68923043	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.72	chr3	+	5156	17	NNC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-253	0	intron_retention	FALSE	non_canonical	0	0	junction_2	298.542337606829	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68923569	68941956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_68923591_68923984_68926229_68926269_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.74	chr3	+	197	1	Intergenic	novelGene_17903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	645	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACATAGTAGATTCCAC	NA	False	NA	NA	False	NA	NA	NA	68930242	68930439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68930200_68930400
ES.21645.75	chr3	+	10121	1	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	-168	-472	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	702	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTTTATTTCTTGC	NA	False	NA	NA	False	AGTAAA	-17	NA	68931358	68941479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68931400_68941500
ES.21645.76	chr3	+	4186	11	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	129	-2	intron_retention	FALSE	canonical	3	674	junction_1	129.804660933265	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68931655	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68931684_68933156_68935052_68935151_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.77	chr3	+	4187	10	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	1307	-2	intron_retention	FALSE	canonical	3	677	junction_5	109.635760589326	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68932833	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270
ES.21645.78	chr3	+	2843	11	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	1688	-2	intron_retention	FALSE	canonical	3	677	junction_6	122.944906360532	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAAGTTTCCTGTTTT	NA	False	NA	18	True	TATAAA	-19	NA	68933214	68941954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68940223_68940358_68940592_68941270_68941455_68941706
ES.21645.79	chr3	+	2669	2	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	2018	1228	intron_retention	FALSE	canonical	3	1063	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACTGCTGCCCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	68933544	68937016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68935931_68936733
ES.21645.8	chr3	+	1266	8	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	226	16393	-6	57	5prime_fragment	FALSE	canonical	3	521	junction_3	58.1644396587496	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAATATTGAAATTCAA	NA	False	NA	NA	False	NA	NA	NA	68912296	68925563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403
ES.21645.80	chr3	+	3419	8	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	2970	-5	intron_retention	FALSE	canonical	3	677	junction_3	93.0367493772965	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTGAATGACAAGTTT	NA	False	NA	10	True	TATAAA	-11	NA	68934496	68941946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68935232_68935777_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270
ES.21645.81	chr3	+	175	1	Intergenic	novelGene_17904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	686	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAGTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	68938001	68938176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_68938000_68938200
ES.21645.82	chr3	+	6035	1	Genic_Genomic	ENSMUSG00000034349.15	novel	NA	NA	NA	NA	3376	5160	mono-exon	FALSE	NA	NA	NA	NA	NA	687	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAACAAAACATAA	NA	False	NA	NA	False	NA	NA	NA	68941081	68947116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_68941100_68947100
ES.21645.9	chr3	+	3974	24	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	37	junction_6	202.686652291199	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAAGTTTCCTGTTT	NA	False	NA	17	True	TATAAA	-18	NA	68912302	68941953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923484_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ES.21646.1	chr3	-	4103	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	-9	-30	-9	4	multi-exon	FALSE	non_canonical	3	27	junction_10	3.97847393451879	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGTGTTCTTTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	68911912	68799827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21646.11	chr3	-	2825	19	NIC	ENSMUSG00000027778.16	novel	4064	20	NA	NA	-12	6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	8.90848534326184	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTCTGATTGTATGTA	NA	False	NA	NA	False	AATAAA	-23	NA	68911843	68800971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21646.12	chr3	-	6462	3	NIC	ENSMUSG00000027778.16	novel	2860	7	NA	NA	-1098	5	intron_retention	FALSE	canonical	3	35	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTCTGATTGTATGT	1346	False	NA	NA	False	AATAAA	-22	NA	68823546	68800972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68805942_68821944_68822118_68822226
ES.21646.13	chr3	-	2937	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	12	1115	1	5	multi-exon	FALSE	non_canonical	3	27	junction_10	3.97847393451879	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTCTGATTGTATGT	NA	False	NA	NA	False	AATAAA	-22	NA	68911891	68800972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21646.14	chr3	-	1542	9	NNC	ENSMUSG00000027778.16	novel	755	8	NA	NA	9	-10522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.4197860826504	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACATTCCTTCAAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	68911849	68857982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68858629_68869512_68869651_68870966_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21646.15	chr3	-	2151	2	NNC	ENSMUSG00000027778.16	novel	741	6	NA	NA	-1377	-1374	intron_retention	FALSE	canonical	1	1	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	68913280	68911001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68912913_68913040
ES.21646.2	chr3	-	4121	21	NNC	ENSMUSG00000027778.16	novel	4064	20	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	11.0782444457594	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTCTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	68911852	68799834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911597_68911683_68911764
ES.21646.3	chr3	-	4057	19	NIC	ENSMUSG00000027778.16	novel	4064	20	NA	NA	-13	-3	intron_retention	FALSE	non_canonical	0	0	junction_12	11.6661375541393	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTCTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	68911844	68799834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911597
ES.21646.4	chr3	-	3909	19	NIC	ENSMUSG00000027778.16	novel	4064	20	NA	NA	20	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	8.90848534326184	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTCTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	68911790	68799834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21646.7	chr3	-	7559	18	NIC	ENSMUSG00000027778.16	novel	7616	19	NA	NA	-9	-12	intron_retention	FALSE	canonical	0	0	junction_7	9.16666142392636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATGAAGTCT	NA	False	NA	NA	False	AATAAA	-7	NA	68911912	68799843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68901916_68911764
ES.21646.9	chr3	-	5100	19	NIC	ENSMUSG00000027778.16	novel	4064	20	NA	NA	0	-12	intron_retention	FALSE	non_canonical	3	27	junction_9	4.04336066065084	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAATGAAGTCT	NA	False	NA	NA	False	AATAAA	-7	NA	68911817	68799843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ES.21647.1	chr3	-	2996	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952086	68942620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951886
ES.21647.11	chr3	-	2949	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGTGGTGACATAGT	NA	False	NA	-13	True	AATAAA	-19	NA	68952087	68942627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945295_68951100_68951176_68951880
ES.21647.13	chr3	-	3325	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-3	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAGTCTTAGAAAGTG	NA	False	NA	-23	True	AATAAA	-9	NA	68952059	68942637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945366_68951047_68951176_68951590
ES.21647.15	chr3	-	2980	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	8	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAGTCTTAGAAAGTG	NA	False	NA	-23	True	AATAAA	-9	NA	68952040	68942637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945366_68951067_68951176_68951896
ES.21647.16	chr3	-	2947	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	15	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	297.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAGTCTTAGAAAGTG	NA	False	NA	-23	True	AATAAA	-9	NA	68952033	68942637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951865
ES.21647.17	chr3	-	3037	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-5	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAGTCTTAGAAAGTG	NA	False	NA	-23	True	AATAAA	-9	NA	68952061	68942637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945366_68951047_68951176_68951880
ES.21647.18	chr3	-	2734	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-14	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAGTGCCAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	68952102	68942904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951880
ES.21647.19	chr3	-	2558	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-20	-466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGCTGACAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	68952108	68943086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951880
ES.21647.2	chr3	-	3216	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952300	68942620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951880
ES.21647.20	chr3	-	2521	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	9	-468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAACAATGCTGACAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	68952079	68943088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951886
ES.21647.21	chr3	-	2664	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	-30	-1081	10	-468	multi-exon	FALSE	canonical	3	60	junction_2	267.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAACAATGCTGACAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	68952078	68943088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68945342_68951100_68951176_68951742
ES.21647.22	chr3	-	1971	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	8	-426	8	426	multi-exon	FALSE	canonical	3	60	junction_2	267.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCACAAGCCTATTTTG	NA	False	NA	NA	False	TTTAAA	-19	NA	68952040	68943743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68945342_68951100_68951176_68951742
ES.21647.23	chr3	-	1445	3	NNC	ENSMUSG00000034317.15	novel	1553	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.5	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGTTAAAGGAATTTA	NA	False	NA	NA	False	AATACA	-15	NA	68952078	68944169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951880
ES.21647.24	chr3	-	6021	1	NIC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	1	-1897	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	68952087	68946066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68946100_68952100
ES.21647.25	chr3	-	5316	2	NNC	ENSMUSG00000034317.15	novel	384	2	NA	NA	1	-1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	68952087	68946066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68951176_68951880
ES.21647.26	chr3	-	5212	2	ISM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	170	1930	170	-1930	5prime_fragment	FALSE	canonical	3	60	junction_1	0	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68951878	68946099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_68951176_68951742
ES.21647.3	chr3	-	3338	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	293	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952132	68942620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951590
ES.21647.4	chr3	-	3121	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	-19	-1549	-11	0	multi-exon	FALSE	canonical	3	60	junction_2	267.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952067	68942620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68945342_68951100_68951176_68951742
ES.21647.5	chr3	-	2911	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	297.5	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952087	68942620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951972
ES.21647.6	chr3	-	2897	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	-11	True	AATAAA	-21	NA	68952033	68942625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945338_68951100_68951176_68951923
ES.21647.7	chr3	-	2933	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	1	5	1	-5	multi-exon	FALSE	canonical	3	361	junction_2	117	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	-11	True	AATAAA	-21	NA	68952087	68942625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68945342_68951100_68951176_68951945
ES.21647.8	chr3	-	2965	3	NNC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	297.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGGTGACATAGTTT	NA	False	NA	-11	True	AATAAA	-21	NA	68952076	68942625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68945342_68951100_68951176_68951902
ES.21648.1	chr3	+	1721	1	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTACTGGAATGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	68983217	68984938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_68983200_68984900
ES.21648.2	chr3	+	4926	1	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	68983217	68988143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_68983200_68988100
ES.21648.3	chr3	+	4659	2	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68983217	68988094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_68984722_68984939
ES.21648.4	chr3	+	2379	2	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	68983217	68988128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_68984177_68986708
ES.21649.1	chr3	-	8823	17	FSM	ENSMUSG00000027782.11	ENSMUST00000029353.9	8819	17	-2	-2	-2	2	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGACTACCTAAAAGTCT	NA	False	NA	-2	True	NA	NA	NA	69034448	68974479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.11	chr3	-	3726	17	NNC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.8574157286582	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGTGGTGTGTG	NA	False	NA	-4	True	AATAAA	-30	NA	69034436	68979556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993141_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.12	chr3	-	3695	17	NNC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	64.5423492270773	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGCGTGTGTGTGGTGT	NA	False	NA	-7	True	AATAAA	-27	NA	69034411	68979559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034075
ES.21649.13	chr3	-	3590	16	NNC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	132	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	64.6723021599407	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGGGCGTGTGTGTGG	NA	False	NA	-10	True	AATAAA	-24	NA	69034293	68979562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008638_69008764_69009536_69009582_69034064
ES.21649.14	chr3	-	4493	16	NIC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	-8	-14	intron_retention	FALSE	canonical	3	213	junction_6	22.9875328529763	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTACAAGGGGCGTGTG	NA	False	NA	-15	True	AATAAA	-19	NA	69034433	68979567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69009582_69034064
ES.21649.16	chr3	-	3598	17	NNC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	102	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.908800202669	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTACAAGGGGCGTG	NA	False	NA	-17	True	AATAAA	-17	NA	69034323	68979569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994912_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.17	chr3	-	3613	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-11	124	10	-124	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGTTAAACTTTAAAACT	NA	False	NA	33	True	NA	NA	NA	69034436	68979677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.18	chr3	-	3139	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-21	608	0	-608	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGTTTGAACACCT	NA	False	NA	NA	False	AATAAA	-35	NA	69034446	68980161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.2	chr3	-	9018	18	NNC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	82.6553690609514	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAACTTCTCACATGACT	NA	False	NA	-14	True	NA	NA	NA	69034432	68974491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69023795_69024019_69034064
ES.21649.20	chr3	-	1952	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	33	1741	33	-1741	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGAAGATTTCATTT	NA	False	NA	NA	False	ATTAAA	-10	NA	69034392	68981294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.21	chr3	-	2114	1	NIC	ENSMUSG00000027782.11	novel	8819	17	NA	NA	30682	880	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTTTTTTATCATCG	3145	False	NA	NA	False	AAAAAG	-8	NA	69003281	69001167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_69001200_69003300
ES.21649.3	chr3	-	6598	17	FSM	ENSMUSG00000027782.11	ENSMUST00000029353.9	8819	17	210	2011	189	-2011	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTGTCAAGCTCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	69034236	68976492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.4	chr3	-	6592	17	FSM	ENSMUSG00000027782.11	ENSMUST00000029353.9	8819	17	35	2192	14	-2192	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCACTGTGATCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	69034411	68976673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.5	chr3	-	3761	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	-34	-1	-13	1	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGTGTGTGGATT	NA	False	NA	0	True	AATAAA	-34	NA	69034459	68979552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.21649.6	chr3	-	6300	16	NIC	ENSMUSG00000027782.11	novel	3726	17	NA	NA	9	0	intron_retention	FALSE	canonical	3	213	junction_5	26.8601315459673	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTGTGGAT	NA	False	NA	-1	True	AATAAA	-33	NA	69034437	68979553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ES.2165.1	chr1	-	520	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	-21	-118	-21	118	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	NA	False	NA	NA	False	AATAAA	-17	NA	189010041	189009521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189009500_189010000
ES.21650.1	chr3	+	363	2	Intergenic	novelGene_17905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAAAAAATCTCCCC	NA	False	NA	NA	False	NA	NA	NA	69168237	69171295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_69168307_69171001
ES.21650.2	chr3	+	638	3	Intergenic	novelGene_17906	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGATCATAGGGTGAAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	69168249	69179054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_69168307_69171001_69171134_69178605
ES.21651.1	chr3	+	4898	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-300	4819	-300	2884	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTCCTGAGACCTGTA	1474	False	NA	NA	False	AATAAA	-26	NA	69223893	69463316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.10	chr3	+	4018	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-9	5408	-9	2295	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATATTT	1765	False	NA	NA	False	NA	NA	NA	69224184	69462727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.11	chr3	+	3711	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-9	5715	-9	1988	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTATACAGTCAACTTC	1765	False	NA	-82	True	ACTAAA	-14	NA	69224184	69462420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.12	chr3	+	5806	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	8	3603	8	-3603	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAAGAATGCATGCT	1782	False	NA	NA	False	ATTAAA	-36	NA	69224201	69464532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.2	chr3	+	4103	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-288	5602	-288	2101	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAAGTTAGTTGGTTGG	1486	False	NA	31	True	AATAAA	-43	NA	69223905	69462533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.3	chr3	+	3394	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-200	6223	-200	1480	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGAGCCGGCCTTGTT	1574	False	NA	NA	False	NA	NA	NA	69223993	69461912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.4	chr3	+	6863	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-118	2672	-118	-2672	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCGCCTTTGCACAA	1656	False	NA	NA	False	AATACA	-24	NA	69224075	69465463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.6	chr3	+	3898	5	NNC	ENSMUSG00000027784.11	novel	9417	4	NA	NA	-21	2076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.3478468160096	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTGGGTGAAGAAAAAAA	1753	False	NA	6	True	AATAAA	-18	NA	69224172	69462508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69225299_69281032_69281120_69405103_69405279_69456658_69456821_69460160
ES.21651.7	chr3	+	9449	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-18	-14	-18	14	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATTTCTCTTCTGAA	1756	False	NA	39	True	ATTAAA	-42	NA	69224175	69468149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21651.8	chr3	+	3289	3	NNC	ENSMUSG00000027784.11	novel	9417	4	NA	NA	-16	2016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAATAAGCAAGAACTCCG	1758	False	NA	NA	False	NA	NA	NA	69224177	69407323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69225299_69405103_69406865_69406916
ES.21651.9	chr3	+	3487	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	-10	5940	-10	1763	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCTCAGAATGTTT	1764	False	NA	NA	False	NA	NA	NA	69224183	69462195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ES.21652.1	chr3	-	168	1	Intergenic	novelGene_17907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGGACAACTGTG	2112	False	NA	NA	False	NA	NA	NA	69287841	69287673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_69287700_69287800
ES.21653.1	chr3	-	814	2	Antisense	novelGene_ENSMUSG00000027784.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	69337420	69336525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_69337058_69337138
ES.21654.1	chr3	-	2285	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	-26	-231	-26	231	multi-exon	FALSE	canonical	3	41	junction_2	5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGAAAGGCCACCA	NA	False	NA	-9	True	AATAAA	-9	NA	69506319	69481259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_69483294_69486658_69486725_69506134
ES.21654.2	chr3	-	3052	4	NNC	ENSMUSG00000043300.3	novel	2028	3	NA	NA	17408	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0416305603426	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGAAAGGCCACCA	NA	False	NA	-9	True	AATAAA	-9	NA	69488885	69481259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_69482379_69482955_69483294_69486658_69486725_69487356
ES.21654.3	chr3	-	2025	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	-6	9	-6	-9	multi-exon	FALSE	canonical	3	41	junction_2	5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTAGTCAGTGTTTC	NA	False	NA	-8	True	ATTAAA	-32	NA	69506299	69481499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_69483294_69486658_69486725_69506134
ES.21654.5	chr3	-	2075	4	NNC	ENSMUSG00000043300.3	novel	2028	3	NA	NA	47	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.1564725772779	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTTTTTTAAAAATGT	NA	False	NA	-20	True	ATTAAA	-20	NA	69506246	69481511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_69483294_69486658_69486725_69495275_69495391_69506134
ES.21654.6	chr3	-	2048	4	NNC	ENSMUSG00000043300.3	novel	2028	3	NA	NA	115	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.3666428910958	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTGTATAGTTTTTTA	NA	False	NA	-27	True	ATTAAA	-13	NA	69506178	69481518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_69483294_69486658_69486725_69503435_69503599_69506134
ES.21655.1	chr3	-	175	1	Intergenic	novelGene_17908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69535503	69535328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_69535300_69535500
ES.21656.1	chr3	-	1422	3	Intergenic	novelGene_17909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTTGCTCCAC	NA	False	NA	NA	False	NA	NA	NA	69540028	69535834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_69536269_69536510_69537377_69539906
ES.21657.1	chr3	-	194	1	Intergenic	novelGene_17910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATCTAGATATT	NA	False	NA	NA	False	NA	NA	NA	69556971	69556777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_69556800_69557000
ES.21658.1	chr3	-	182	1	Intergenic	novelGene_17911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGAGTGCCCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	69606423	69606241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_69606200_69606400
ES.21659.1	chr3	+	1860	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	-54	7329	-54	2	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629263	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.10	chr3	+	1804	16	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	246.680756354353	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629356	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654206_69655630_69655702_69656104
ES.21659.11	chr3	+	3213	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-8	5	intron_retention	FALSE	canonical	3	839	junction_3	66.9193849466106	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69629356	69656380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69654169_69655630_69655702_69656104
ES.21659.12	chr3	+	3924	9	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	39	17226	-8	-890	5prime_fragment	FALSE	canonical	3	839	junction_3	68.9264780400101	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTACAGACTCAAACATT	NA	False	NA	NA	False	ATTAAA	-12	NA	69629356	69646480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325
ES.21659.14	chr3	+	5880	5	NIC	ENSMUSG00000027787.15	novel	945	7	NA	NA	-1	27	intron_retention	FALSE	canonical	3	858	junction_1	59.8122061121307	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATTAATTTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	69629363	69639336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69636752_69637737_69637867_69638897
ES.21659.18	chr3	+	2053	6	ISM	ENSMUSG00000027787.15	ENSMUST00000127211.7	945	7	-50	-27	8	27	intron_retention	FALSE	canonical	3	839	junction_3	77.4715431626349	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATTAATTTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	69629372	69639336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737
ES.21659.19	chr3	+	4776	14	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	10	2	intron_retention	FALSE	canonical	3	839	junction_3	69.2363245634346	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629374	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69654169_69655630_69655702_69656104
ES.21659.2	chr3	+	2052	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	31	7052	-16	279	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTGATATAAACTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	69629348	69656654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.20	chr3	+	1561	14	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	265.561479526463	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTGTGAAGGTTTC	NA	False	NA	12	True	AATAAA	-22	NA	69629375	69656376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69654061_69654169_69655630_69655702_69656104
ES.21659.24	chr3	+	4676	13	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	12	1	intron_retention	FALSE	canonical	2	45	junction_3	262.564423311478	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTGTGAAGGTTTC	NA	False	NA	12	True	AATAAA	-22	NA	69629376	69656376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69654169_69655630_69655702_69656104
ES.21659.25	chr3	+	1733	16	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	244.957592701721	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAAAGTGTTGTGAAGG	NA	False	NA	8	True	AATAAA	-18	NA	69629379	69656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648847_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.26	chr3	+	3323	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	18	0	intron_retention	FALSE	canonical	3	839	junction_3	68.7762194900748	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629382	69656375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.27	chr3	+	1721	16	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	248.084035941229	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629384	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650936_69652537_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.28	chr3	+	9655	2	ISM	ENSMUSG00000027787.15	ENSMUST00000127211.7	945	7	-27	-27	-20	27	intron_retention	FALSE	canonical	3	858	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATTAATTTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	69629395	69639336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69629456_69629741
ES.21659.3	chr3	+	3639	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-16	5	intron_retention	FALSE	canonical	3	839	junction_3	69.004621259029	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69629348	69656380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.31	chr3	+	2593	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-18	1	intron_retention	FALSE	canonical	3	839	junction_3	61.890662313734	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTGTGAAGGTTTC	NA	False	NA	12	True	AATAAA	-22	NA	69629397	69656376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.33	chr3	+	993	7	FSM	ENSMUSG00000027787.15	ENSMUST00000127211.7	945	7	-25	-23	-18	23	multi-exon	FALSE	canonical	3	839	junction_3	71.0604203008491	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAACATTAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	69629397	69639332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897
ES.21659.37	chr3	+	1936	15	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	157	7328	52	3	3prime_fragment	FALSE	canonical	3	839	junction_2	63.0632982949412	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTGTGAAGGTTTCAT	NA	False	NA	14	True	AATAAA	-24	NA	69629474	69656378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.39	chr3	+	7310	11	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	707	527	intron_retention	FALSE	canonical	0	0	junction_8	299.019748511699	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGAGGGTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	69632275	69656902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69649065_69650060_69654169_69655630_69655702_69656104
ES.21659.40	chr3	+	6038	8	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	1169	2	intron_retention	FALSE	canonical	0	0	junction_4	439.28476190373	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69632737	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69636752_69637737_69638989_69642378_69642458_69643325_69643423_69648841_69648988_69654061_69654169_69655630_69655702_69656104
ES.21659.41	chr3	+	1170	10	ISM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	9578	7329	7327	2	3prime_fragment	FALSE	canonical	3	849	junction_2	60.6674806620198	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69638895	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.21659.42	chr3	+	5969	6	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	10809	5	intron_retention	FALSE	canonical	3	849	junction_1	71.3431145941919	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTGAAGGTTTCATAA	NA	False	NA	16	True	AATAAA	-26	NA	69642377	69656380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69642458_69643325_69643423_69647252_69647371_69648841_69654169_69655630_69655702_69656104
ES.21659.43	chr3	+	6075	1	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-2937	527	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGAGGGTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	69650827	69656902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69650800_69656900
ES.21659.44	chr3	+	1690	2	ISM	ENSMUSG00000027787.15	ENSMUST00000150210.2	746	3	520	-2	520	2	3prime_fragment	FALSE	canonical	3	1038	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69654284	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_69655702_69656104
ES.21659.5	chr3	+	5077	14	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-16	0	intron_retention	FALSE	canonical	3	839	junction_3	69.4186339937781	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629348	69656375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69650962_69652545_69654169_69655630_69655702_69656104
ES.21659.6	chr3	+	5133	12	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-11	2	intron_retention	FALSE	canonical	2	45	junction_3	274.238931837799	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTTGTGAAGGTTTCA	NA	False	NA	13	True	AATAAA	-23	NA	69629353	69656377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69636670_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69654169_69655630_69655702_69656104
ES.21659.8	chr3	+	1974	5	NIC	ENSMUSG00000027787.15	novel	945	7	NA	NA	-10	27	intron_retention	FALSE	canonical	2	45	junction_3	394.818312645196	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACATTAATTTTCTGACT	NA	False	NA	NA	False	NA	NA	NA	69629354	69639336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69636670_69636752_69637737
ES.21659.9	chr3	+	1786	16	NNC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	248.349180702404	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629356	69656375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650827_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ES.2166.1	chr1	+	202	1	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTGTAAAGAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	189301542	189301744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_189301500_189301700
ES.21660.1	chr3	+	3696	1	Genic_Genomic	ENSMUSG00000027787.15	novel	NA	NA	NA	NA	6248	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTCTGGTTGAGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	69660012	69663708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_69660000_69663700
ES.21660.2	chr3	+	2621	1	Genic_Genomic	ENSMUSG00000027787.15	novel	NA	NA	NA	NA	7983	662	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCATATGTTGATGAT	NA	False	NA	NA	False	AATAAA	-13	NA	69661747	69664368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_69661700_69664400
ES.21661.1	chr3	-	2659	1	Antisense	novelGene_ENSMUSG00000027787.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCTGAACACAAATGTTAA	NA	False	NA	NA	False	AAAAAG	-44	NA	69662431	69659772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_69659800_69662400
ES.21662.1	chr3	+	191	1	Intergenic	novelGene_17912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATGTAGCCAAAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	69872235	69872426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_69872200_69872400
ES.21663.1	chr3	-	182	1	Intergenic	novelGene_17913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATGTTGAATC	NA	False	NA	NA	False	NA	NA	NA	70198883	70198701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_70198700_70198900
ES.21664.1	chr3	+	3540	1	Intergenic	novelGene_17914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	70479620	70483160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_70479600_70483200
ES.21665.1	chr3	-	164	1	Intergenic	novelGene_17915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAACCACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70577983	70577819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_70577800_70578000
ES.21666.1	chr3	-	188	1	Intergenic	novelGene_17916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	70836157	70835969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_70836000_70836200
ES.21667.1	chr3	+	178	1	Intergenic	novelGene_17917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	71896888	71897066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_71896900_71897100
ES.21668.1	chr3	+	175	1	Intergenic	novelGene_17918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAAGTGACATCAG	NA	False	NA	NA	False	NA	NA	NA	72398652	72398827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_72398700_72398800
ES.21669.1	chr3	-	181	1	Intergenic	novelGene_17919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73469246	73469065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_73469100_73469200
ES.2167.1	chr1	+	172	2	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	189353042	189353280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_189353126_189353191
ES.21670.1	chr3	-	6023	4	FSM	ENSMUSG00000027792.12	ENSMUST00000029367.6	6210	4	188	-1	15	1	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTGTCTTAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	73615560	73543139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_73547375_73555969_73556137_73607904_73609433_73615467
ES.21670.2	chr3	-	3115	4	FSM	ENSMUSG00000027792.12	ENSMUST00000029367.6	6210	4	198	2897	25	-2897	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTTGATGGTTATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	73615550	73546037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_73547375_73555969_73556137_73607904_73609433_73615467
ES.21671.1	chr3	+	208	1	Intergenic	novelGene_17920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTTCGAAAAGGATGAGA	NA	False	NA	NA	False	NA	NA	NA	74764849	74765057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_74764800_74765100
ES.21672.1	chr3	-	1775	1	FSM	ENSMUSG00000102420.2	ENSMUST00000192431.2	2220	1	414	31	414	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATAAATAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	74931508	74929733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_74929700_74931500
ES.21673.1	chr3	+	802	1	Intergenic	novelGene_17921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATTGGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	75421577	75422379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_75421600_75422400
ES.21674.1	chr3	-	1839	8	NNC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	504.141379587358	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	False	NA	-11	True	ATTAAA	-13	NA	75464106	75423796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464059
ES.21674.10	chr3	-	7936	8	NNC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	12	300	intron_retention	FALSE	canonical	0	0	junction_1	669.047907134322	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTTTGTCCTTAATCA	NA	False	NA	-17	True	AATAAA	-14	NA	75464106	75424282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75424909_75427694_75427769_75428008_75428092_75428337_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.11	chr3	-	1308	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	4	615	4	171	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATGCATATATATA	NA	False	NA	13	True	AATAAA	-33	NA	75464159	75424411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.12	chr3	-	4384	1	NIC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	68	157	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTTTACTTGAAAAAA	NA	False	NA	-1	True	AATAAA	-19	NA	75428809	75424425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75424400_75428800
ES.21674.13	chr3	-	6442	2	FSM	ENSMUSG00000027835.12	ENSMUST00000159519.2	655	2	-5633	-154	-5093	154	multi-exon	FALSE	canonical	3	1269	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCTTTACTTGAAA	NA	False	NA	-4	True	AATAAA	-16	NA	75433970	75424428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008
ES.21674.16	chr3	-	8791	6	NIC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	-20	154	intron_retention	FALSE	canonical	3	1269	junction_1	105.130395224217	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCTTTACTTGAAA	NA	False	NA	-4	True	AATAAA	-16	NA	75464086	75424428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75424909_75428008_75428092_75428337_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.18	chr3	-	1073	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	61	793	16	-7	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACGCCTTAAT	NA	False	NA	NA	False	NA	NA	NA	75464102	75424589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.19	chr3	-	3187	2	FSM	ENSMUSG00000027835.12	ENSMUST00000159519.2	655	2	-2539	7	-1999	-7	multi-exon	FALSE	canonical	3	1269	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACGCCTTAAT	NA	False	NA	NA	False	NA	NA	NA	75430876	75424589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008
ES.21674.2	chr3	-	1880	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	47	0	2	0	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	False	NA	-11	True	ATTAAA	-13	NA	75464116	75423796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.20	chr3	-	965	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	48	914	3	57	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAATGGGATTATTGC	NA	False	NA	NA	False	TATAAA	-33	NA	75464115	75424710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.21	chr3	-	7379	1	NIC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	-25	-16021	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTATATCTTTCTACC	NA	False	NA	NA	False	TTTAAA	-34	NA	75464091	75456712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75456700_75464100
ES.21674.3	chr3	-	1866	8	NNC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	505.158653599166	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTTGCTATAAGACAA	NA	False	NA	-13	True	ATTAAA	-11	NA	75464020	75423798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75463944
ES.21674.4	chr3	-	5698	3	FSM	ENSMUSG00000027835.12	ENSMUST00000160196.2	697	3	-3965	-1036	-3965	-2	multi-exon	FALSE	canonical	3	1269	junction_1	63	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTTGCTATAAGACAA	NA	False	NA	-13	True	ATTAAA	-11	NA	75432842	75423798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337
ES.21674.5	chr3	-	1404	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	39	484	-6	302	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGTCCTTAATCACT	NA	False	NA	-15	True	AATAAA	-16	NA	75464124	75424280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ES.21674.6	chr3	-	1323	7	NIC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	21	302	combination_of_known_splicesites	FALSE	canonical	1	9	junction_5	508.019247229429	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGTCCTTAATCACT	NA	False	NA	-15	True	AATAAA	-16	NA	75464097	75424280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75448466_75448686_75464028
ES.21674.7	chr3	-	6572	3	FSM	ENSMUSG00000027835.12	ENSMUST00000160196.2	697	3	-5322	-553	-5322	301	multi-exon	FALSE	canonical	3	1269	junction_1	63	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTCCTTAATCAC	NA	False	NA	-16	True	AATAAA	-15	NA	75434199	75424281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75424909_75428008_75428092_75428337
ES.21674.9	chr3	-	1337	8	NNC	ENSMUSG00000027835.12	novel	1927	8	NA	NA	92	301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	505.158653599166	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTCCTTAATCAC	NA	False	NA	-16	True	AATAAA	-15	NA	75463974	75424281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75463944
ES.21675.1	chr3	+	3336	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	-390	1145	-390	-1145	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATTATGTGATGTCCC	NA	False	NA	5	True	AATAAA	-16	NA	75464463	75549657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
ES.21676.1	chr3	-	2026	1	Antisense	novelGene_ENSMUSG00000027834.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAATTGTCTTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	75546669	75544643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_75544600_75546700
ES.21677.1	chr3	+	3528	1	Antisense	novelGene_ENSMUSG00000099370.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAGACCACCTGGGGT	NA	False	NA	NA	False	NA	NA	NA	75551741	75555269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_75551700_75555300
ES.21678.1	chr3	-	6272	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	4459	intron_retention	FALSE	canonical	3	25	junction_2	102.5	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGTGTGTGTGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	75563058	75550293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562962
ES.21678.10	chr3	-	1300	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-20	-138	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	109.5	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTCTCCATTCTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	75563058	75555284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562888_75562962
ES.21678.11	chr3	-	1294	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-64	-138	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	79.5	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTCTCCATTCTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	75563102	75555284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562993
ES.21678.13	chr3	-	1233	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	23	-143	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	102.5	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGGTGGTCTCCATTC	NA	False	NA	-5	True	AATAAA	-14	NA	75563015	75555289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562962
ES.21678.15	chr3	-	896	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-62	-534	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	79.5	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCGGGGGCTATTAGA	NA	False	NA	NA	False	NA	NA	NA	75563100	75555680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562993
ES.21678.17	chr3	-	5183	1	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	99	-2610	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTTGTCTTGGTCCCAT	NA	False	NA	-1	True	NA	NA	NA	75562939	75557756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75557800_75562900
ES.21678.18	chr3	-	2852	1	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	99	-4941	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTTTTCAAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	75562939	75560087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75560100_75562900
ES.21678.19	chr3	-	139	1	Genic_Genomic	ENSMUSG00000099370.2	novel	NA	NA	NA	NA	-28	-7781	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTGTCTTGGTTCCA	NA	False	NA	-3	True	NA	NA	NA	75563066	75562927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_75562900_75563100
ES.21678.4	chr3	-	2027	2	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-7	5	intron_retention	FALSE	canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	NA	False	NA	0	True	NA	NA	NA	75563045	75554747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562568
ES.21678.5	chr3	-	1813	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-18	2	intron_retention	FALSE	canonical	3	25	junction_2	102.5	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCATGGTCATGGTGTT	NA	False	NA	-3	True	NA	NA	NA	75563056	75554750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562962
ES.21678.6	chr3	-	8157	2	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	40	1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCATGGTCATGGTGT	NA	False	NA	-4	True	NA	NA	NA	75562998	75554751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75557663_75557752
ES.21678.7	chr3	-	935	4	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	92.8906166771793	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTCATGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	75563043	75554754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75555246_75556106_75556298_75562696_75562869_75562962
ES.21678.8	chr3	-	1784	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	71	junction_2	79.5	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTCATGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	75563062	75554754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562869_75562993
ES.21678.9	chr3	-	1793	3	NNC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	17	-2	intron_retention	FALSE	canonical	3	11	junction_2	109.5	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTCATGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	75563021	75554754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75556298_75562696_75562888_75562962
ES.21679.1	chr3	-	5577	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	82	-1108	41	9	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAATTGTGTTTCTATTC	NA	False	NA	NA	False	AATAAA	-25	NA	75864174	75782381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.10	chr3	-	3955	17	NNC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.53939201416946	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAGTCTTTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	75864242	75783791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75784964_75785243_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.11	chr3	-	3887	15	FSM	ENSMUSG00000034109.16	ENSMUST00000038563.14	5546	15	256	1403	-23	-8	multi-exon	FALSE	canonical	2	2	junction_9	9.18989018610413	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAAGTCTTTTAAAGC	NA	False	NA	NA	False	AATAAA	-14	NA	75863980	75783793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.13	chr3	-	4135	13	NIC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	-6	1853	intron_retention	FALSE	canonical	3	22	junction_5	5.33007713098246	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	75864221	75792224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.14	chr3	-	3062	14	ISM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	305	9209	6	1379	5prime_fragment	FALSE	canonical	3	22	junction_6	5.18646394801156	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCTAACGGTGCGTC	NA	False	NA	NA	False	NA	NA	NA	75863951	75792698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.15	chr3	-	2378	9	ISM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	6	18068	6	602	5prime_fragment	FALSE	canonical	3	22	junction_1	5.89358761706314	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTGCTGGTAGAC	NA	False	NA	NA	False	CATAAA	-16	NA	75864250	75801557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.16	chr3	-	3079	6	NIC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	-36	-2992	intron_retention	FALSE	canonical	3	23	junction_3	6.1773780845922	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGACTGCATCTGCCT	NA	False	NA	NA	False	AATAAA	-17	NA	75863993	75809525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_75809792_75810553_75810637_75813705_75813857_75815436_75817366_75818881_75818957_75863418
ES.21679.17	chr3	-	1096	3	FSM	ENSMUSG00000034109.16	ENSMUST00000125405.2	817	3	-269	-10	10	10	multi-exon	FALSE	canonical	3	30	junction_2	3	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75864226	75817152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75817366_75818881_75818957_75863418
ES.21679.2	chr3	-	5301	12	NNC	ENSMUSG00000034109.16	novel	5546	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	12.942977291065	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCTTTCTAAATTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	75864266	75782390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809759_75813754_75813842_75863418
ES.21679.3	chr3	-	4557	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	-5	-1	-5	1	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGAATATTTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	75864261	75783488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.4	chr3	-	4460	15	FSM	ENSMUSG00000034109.16	ENSMUST00000038563.14	5546	15	-13	1099	-5	0	multi-exon	FALSE	canonical	2	2	junction_9	9.18989018610413	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGAATATTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	75864249	75783489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.5	chr3	-	4364	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	-13	200	-13	96	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTATTTTTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	75864269	75783689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.6	chr3	-	4971	15	NNC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	10.0815551926298	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTTTTAAAGCATATAA	NA	False	NA	NA	False	AATAAA	-20	NA	75864265	75783787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75814620_75817315_75817366_75818881_75818957_75863418
ES.21679.7	chr3	-	3799	15	NNC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.4195369462466	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTCTTTTAAAGCATAT	NA	False	NA	NA	False	AATAAA	-18	NA	75863970	75783789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75785485_75785952_75786025_75793581_75793651_75797828_75797939_75799195_75799279_75800089_75800344_75802139_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.8	chr3	-	4242	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	7	302	-5	-6	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAGTCTTTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	75864249	75783791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.21679.9	chr3	-	3930	17	NNC	ENSMUSG00000034109.16	novel	4551	16	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.53939201416946	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAGTCTTTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	75864227	75783791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_75784672_75784961_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ES.2168.1	chr1	+	178	1	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	189358657	189358835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_189358700_189358800
ES.21680.1	chr3	-	161	1	Intergenic	novelGene_17922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76176594	76176433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_76176400_76176600
ES.21681.1	chr3	+	192	1	Intergenic	novelGene_17923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGAACCCAAGCTT	NA	False	NA	NA	False	NA	NA	NA	76831800	76831992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_76831800_76832000
ES.21682.1	chr3	-	1539	2	Genic_Genomic	ENSMUSG00000037096.7	novel	444	1	NA	NA	-252	898	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTAAATGCCATCAGA	NA	False	NA	NA	False	NA	NA	NA	78874358	78872764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_78873932_78873986
ES.21682.2	chr3	-	230	1	FSM	ENSMUSG00000037096.7	ENSMUST00000036976.7	444	1	269	-55	269	55	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTACTTTTGATTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	78873837	78873607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_78873600_78873800
ES.21683.1	chr3	-	6132	1	Intergenic	novelGene_17924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACTGTCCATAAGTTC	7457	False	NA	NA	False	NA	NA	NA	78959716	78953584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_78953600_78959700
ES.21684.1	chr3	+	5322	1	Antisense	novelGene_ENSMUSG00000062232.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCCTAAACATCTA	NA	False	NA	NA	False	NA	NA	NA	79075611	79080933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_79075600_79080900
ES.21685.1	chr3	+	819	1	Intergenic	novelGene_17928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	8352	False	NA	NA	False	NA	NA	NA	79170011	79170830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79170000_79170800
ES.21685.2	chr3	+	179	1	Intergenic	novelGene_17929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGCATGAGCCA	8603	False	NA	NA	False	NA	NA	NA	79170262	79170441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79170300_79170400
ES.21686.1	chr3	-	7817	29	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-827	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	10.9180621738774	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATGCTTTTTACTAC	NA	False	NA	5	True	AATAAA	-39	NA	79194651	78969811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019624_79080210_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.11	chr3	-	7386	28	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-448	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.3888760821618	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCCTTGTCTAAACTT	NA	False	NA	-23	True	AATAAA	-11	NA	79194272	78969839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019624_79080210_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.13	chr3	-	7590	28	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-654	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.932710285595	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATAACATAA	NA	False	NA	-39	True	NA	NA	NA	79194478	78969855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.16	chr3	-	6699	29	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-708	-955	combination_of_known_splicesites	FALSE	canonical	2	16	junction_23	9.02716987313119	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATAGCATTGCAGTGAG	NA	False	NA	NA	False	AAGAAA	-10	NA	79194532	78970792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.17	chr3	-	5458	29	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	0	-1488	combination_of_known_splicesites	FALSE	canonical	2	16	junction_23	9.02716987313119	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTAAAGATTGTGTTC	NA	False	NA	NA	False	TTTAAA	-7	NA	79193824	78971325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.18	chr3	-	4749	22	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-696	-17923	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.0776024411149	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACGTGGAGCGCTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	79194520	78987760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.19	chr3	-	4810	1	Intergenic	novelGene_17925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAT	9460	False	NA	NA	False	NA	NA	NA	79067134	79062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79062300_79067100
ES.21686.2	chr3	-	7780	29	NIC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-815	4	combination_of_known_splicesites	FALSE	canonical	2	16	junction_23	9.02716987313119	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAATTGTGCATGCTTT	NA	False	NA	-2	True	AATAAA	-32	NA	79194639	78969818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.20	chr3	-	202	1	Intergenic	novelGene_17926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATTACGTGACATCA	9919	False	NA	NA	False	NA	NA	NA	79119507	79119305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79119300_79119500
ES.21686.21	chr3	-	1841	1	Intergenic	novelGene_17927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGCAACTATGGAGTCT	6103	False	NA	NA	False	NA	NA	NA	79141399	79139558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79139600_79141400
ES.21686.3	chr3	-	7095	30	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-59	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	13.7229249160695	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAATTGTGCATGCTTT	NA	False	NA	-2	True	AATAAA	-32	NA	79193883	78969818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79179376_79179448_79193770
ES.21686.4	chr3	-	7717	28	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-764	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	11.932710285595	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATGAATTGTGCATG	NA	False	NA	-6	True	AATAAA	-28	NA	79194588	78969822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990489_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.5	chr3	-	7820	5	NIC	ENSMUSG00000062232.15	novel	6544	24	NA	NA	63441	0	intron_retention	FALSE	canonical	3	38	junction_3	8.52936105461599	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTAAACTTTTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	78988843	78969834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_78971869_78973879_78976756_78977296_78977523_78981614_78981768_78986312
ES.21686.6	chr3	-	9548	28	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-732	0	intron_retention	FALSE	non_canonical	0	0	junction_22	10.9341463112378	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTAAACTTTTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	79194556	78969834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019624_79080210_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21686.9	chr3	-	8300	27	NNC	ENSMUSG00000062232.15	novel	6964	30	NA	NA	-696	0	intron_retention	FALSE	non_canonical	0	0	junction_21	11.1390485395685	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTAAACTTTTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	79194520	78969834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019624_79080210_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ES.21687.1	chr3	+	134	1	Intergenic	novelGene_17930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	79222912	79223046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79222900_79223000
ES.21688.1	chr3	+	151	1	Intergenic	novelGene_17931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAATCAGTGTCTAGT	1176	False	NA	NA	False	AATAAA	-22	NA	79239092	79239243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79239100_79239200
ES.21689.1	chr3	+	181	1	Intergenic	novelGene_17932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	79320220	79320401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79320200_79320400
ES.2169.1	chr1	-	177	1	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAATAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	189361627	189361450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_189361400_189361600
ES.21690.1	chr3	+	169	1	Intergenic	novelGene_17933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	79334297	79334466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79334300_79334500
ES.21691.1	chr3	+	180	1	Intergenic	novelGene_17934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	9	False	NA	NA	False	NA	NA	NA	79345351	79345531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79345400_79345500
ES.21692.1	chr3	+	3861	3	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACACTTTTCATATTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	79366098	79387000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_79369552_79372854_79373056_79386793
ES.21692.2	chr3	+	8503	1	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACACTTTTCATATTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	79378497	79387000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_79378500_79387000
ES.21693.1	chr3	+	6159	1	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAACAAACAGAAAAATC	NA	False	NA	NA	False	NA	NA	NA	79404494	79410653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_79404500_79410700
ES.21693.2	chr3	+	3532	1	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGCAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	79408907	79412439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_79408900_79412400
ES.21694.1	chr3	-	7327	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	-25	-3	-25	3	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCGTTTGTAGTTCCT	8067	False	NA	2	True	AATAAA	-20	NA	79475128	79363277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.10	chr3	-	7055	19	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-45	-279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	35.7545214269347	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTCCTAGTGCTGCA	8161	False	NA	-11	True	AATAAA	-19	NA	79475034	79363559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79465746_79465851_79474815
ES.21694.11	chr3	-	6539	18	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	19	-279	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.6962100180895	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTCCTAGTGCTGCA	8228	False	NA	-11	True	AATAAA	-19	NA	79474967	79363559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79363692_79363879_79367049_79369435_79369552_79372854_79373056_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.15	chr3	-	6982	18	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	109	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.8868023810787	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	NA	False	NA	-16	True	AATAAA	-14	NA	79439074	79363564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419740_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.16	chr3	-	7205	19	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-81	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.97029171018	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTATTCTCCTAGT	8011	False	NA	-17	True	AATAAA	-13	NA	79475184	79363565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419170_79419281_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.17	chr3	-	5619	17	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-24	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.9133004811326	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTATTCTCCTAGT	8182	False	NA	-17	True	AATAAA	-13	NA	79475013	79363565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79389013_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.19	chr3	-	7781	18	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-19	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3001479630079	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTATTCTCCTAGT	8187	False	NA	-17	True	AATAAA	-13	NA	79475008	79363565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367944_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396667_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.2	chr3	-	7551	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-205	1	combination_of_known_junctions	TRUE	canonical	3	39	junction_17	21.062273788996	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAGCGTTTGTAGTTC	NA	False	NA	0	True	AATAAA	-18	NA	79439388	79363279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.21	chr3	-	4595	8	NIC	ENSMUSG00000061175.13	novel	3775	17	NA	NA	-136	-286	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	49.7479360663047	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGCTTATTCTCCTAG	7956	False	NA	-18	True	AATAAA	-12	NA	79475239	79363566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79413513_79413586_79419637_79419710_79419804_79419906_79425371_79425499_79474815
ES.21694.22	chr3	-	6709	18	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	24	-286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.8116422066428	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGCTTATTCTCCTAG	8233	False	NA	-18	True	AATAAA	-12	NA	79474962	79363566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79388028_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.24	chr3	-	7042	19	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	28	-286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.8925700974473	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGCTTATTCTCCTAG	8120	False	NA	-18	True	AATAAA	-12	NA	79475075	79363566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79390622_79390680_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.26	chr3	-	6875	17	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-10	-287	combination_of_known_splicesites	FALSE	canonical	2	7	junction_15	29.7478334295121	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGCTTATTCTCCTA	8082	False	NA	-19	True	AATAAA	-11	NA	79475113	79363567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79425371_79425499_79474815
ES.21694.27	chr3	-	6841	18	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	16	-287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.9757087143996	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGCTTATTCTCCTA	8108	False	NA	-19	True	AATAAA	-11	NA	79475087	79363567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79372907_79386799_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.28	chr3	-	6934	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-241	261	combination_of_known_junctions	FALSE	canonical	3	39	junction_17	21.062273788996	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCATTCTGGGGTGTGT	NA	False	NA	NA	False	AAAAAG	-1	NA	79439424	79363932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.29	chr3	-	6459	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	79	106	combination_of_known_junctions	FALSE	canonical	3	39	junction_17	21.062273788996	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTTTTTATTGTGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	79439104	79364087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.3	chr3	-	6965	17	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	23	-210	combination_of_known_splicesites	FALSE	canonical	2	7	junction_15	31.4015699249257	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCTGTCGGTGCTCTGG	NA	False	NA	58	True	AATACA	-20	NA	79439160	79363490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79425371_79425499_79438849
ES.21694.30	chr3	-	5432	11	ISM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	61546	913	-5728	0	3prime_fragment	FALSE	canonical	3	90	junction_8	15.1410039297267	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGAAGTTTTCCTT	NA	False	NA	NA	False	TATAAA	-20	NA	79413557	79364193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513
ES.21694.31	chr3	-	6025	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	70	-337	combination_of_known_junctions	FALSE	canonical	3	39	junction_17	21.062273788996	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTGCATAATTCCAAA	NA	False	NA	NA	False	AAAAAG	-30	NA	79439113	79364530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.32	chr3	-	5783	17	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	53	-346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.380173136972	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCCACACTTGTGCAT	8262	False	NA	NA	False	AAAAAG	-21	NA	79474933	79364539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386895_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419763_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.33	chr3	-	4256	1	Genic_Genomic	ENSMUSG00000061175.13	novel	NA	NA	NA	NA	-4125	-6482	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTCAAAAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	79377637	79373381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_79373400_79377600
ES.21694.34	chr3	-	6077	15	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	66	4779	combination_of_known_junctions	FALSE	canonical	3	39	junction_14	20.6280223512204	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACTAGTTTTCTTTGG	NA	False	NA	NA	False	TATAAA	-19	NA	79439117	79383910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
ES.21694.35	chr3	-	2417	1	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-745	-7638	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCAGTAGGAAGGTAAT	NA	False	NA	NA	False	NA	NA	NA	79423304	79420887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79420900_79423300
ES.21694.36	chr3	-	1831	1	Genic_Genomic	ENSMUSG00000061175.13	novel	NA	NA	NA	NA	-202	-24305	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTCACATACTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	79439385	79437554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_79437600_79439400
ES.21694.4	chr3	-	9332	17	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-25	-269	intron_retention	FALSE	canonical	0	0	junction_4	30.9109102907048	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCATGATTTCTTT	8181	False	NA	-1	True	AATAAA	-29	NA	79475014	79363549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396261_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.5	chr3	-	6957	3	FSM	ENSMUSG00000061175.13	ENSMUST00000149475.8	3629	3	-2690	-638	-2690	-275	multi-exon	FALSE	canonical	3	112	junction_2	2	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTAGTGCTGCATGAT	NA	False	NA	-7	True	AATAAA	-23	NA	79376202	79363555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79367049_79369435_79369552_79372854
ES.21694.7	chr3	-	7377	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	-353	275	-353	-275	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTAGTGCTGCATGAT	7739	False	NA	-7	True	AATAAA	-23	NA	79475456	79363555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ES.21694.9	chr3	-	7238	19	NNC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-37	-277	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	31.0115967954323	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCCTAGTGCTGCATG	8055	False	NA	-9	True	AATAAA	-21	NA	79475140	79363557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849_79439029_79474815
ES.21695.1	chr3	-	177	1	Intergenic	novelGene_17935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCTACCCCCGCCAA	NA	False	NA	NA	False	NA	NA	NA	79488614	79488437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79488400_79488600
ES.21696.1	chr3	-	490	1	Intergenic	novelGene_17936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTGCCATGTTATTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	79498624	79498134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79498100_79498600
ES.21697.1	chr3	+	1415	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	-22	359	1	15	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGTCTGCATTTT	NA	False	NA	31	True	AATAAA	-30	NA	79498649	79510598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.10	chr3	+	3867	7	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	10	376	10	-2	intron_retention	FALSE	canonical	3	2177	junction_5	235.102578085019	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGAATCTCATTTTAAA	NA	False	NA	14	True	AATAAA	-13	NA	79498681	79510581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564
ES.21697.11	chr3	+	4676	8	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	11	15	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGTCTGCATTTT	NA	False	NA	31	True	AATAAA	-30	NA	79498682	79510598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.12	chr3	+	1519	12	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	13	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1124.13520847901	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGTCTGCATTTT	NA	False	NA	31	True	AATAAA	-30	NA	79498684	79510598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79503398_79503506_79504836_79504869_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.13	chr3	+	5115	7	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	13	-2	intron_retention	FALSE	canonical	3	2177	junction_3	260.592274124413	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79498684	79510955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509793_79510337
ES.21697.14	chr3	+	3614	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	13	-4	intron_retention	FALSE	canonical	3	73	junction_3	797.54397688261	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGAATCTCATTTTA	NA	False	NA	12	True	AATAAA	-11	NA	79498684	79510579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79504869_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.15	chr3	+	1346	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	13	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	818.578819632305	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATACAGTGAATCT	NA	False	NA	5	True	AATAAA	-4	NA	79498684	79510572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510345
ES.21697.16	chr3	+	7150	5	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	14	-9	intron_retention	FALSE	canonical	3	2177	junction_3	286.004698387981	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAGTGAATCTCA	NA	False	NA	7	True	AATAAA	-6	NA	79498685	79510574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564
ES.21697.17	chr3	+	4004	8	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_4	890.178450351045	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79498686	79510955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.18	chr3	+	4270	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	40	-533	17	159	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTTTTATTTATGACA	NA	False	NA	NA	False	AATAAA	-20	NA	79498688	79511116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.19	chr3	+	1340	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	17	-9	at_least_one_novel_splicesite	FALSE	canonical	1	79	junction_6	764.431879741702	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAGTGAATCTCA	NA	False	NA	7	True	AATAAA	-6	NA	79498688	79510574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507576_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.2	chr3	+	6738	7	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	1	-9	intron_retention	FALSE	canonical	3	2177	junction_4	155.183135538484	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAGTGAATCTCA	NA	False	NA	7	True	AATAAA	-6	NA	79498649	79510574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79509666_79509749_79509793_79510337
ES.21697.20	chr3	+	1721	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	820.692856939854	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	False	NA	26	True	AATAAA	-16	NA	79498688	79510954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506369_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.21	chr3	+	1334	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	17	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	816.340857155716	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATACAGTGAATCT	NA	False	NA	5	True	AATAAA	-4	NA	79498688	79510572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506114_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.22	chr3	+	2616	10	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	25	-1	intron_retention	FALSE	canonical	3	18	junction_3	814.194277176924	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGATGTCCTTTCCT	NA	False	NA	28	True	AATAAA	-18	NA	79498696	79510956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79503506_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.24	chr3	+	3315	10	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	29	-1	intron_retention	FALSE	canonical	3	18	junction_3	814.194277176924	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGATGTCCTTTCCT	NA	False	NA	28	True	AATAAA	-18	NA	79498700	79510956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79502616_79503398_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.26	chr3	+	6272	6	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	33	-11	intron_retention	FALSE	canonical	3	2177	junction_3	223.439477263979	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATACAGTGAATCT	NA	False	NA	5	True	AATAAA	-4	NA	79498704	79510572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79507707_79509578_79509666_79509749
ES.21697.27	chr3	+	5177	8	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	33	164	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATTTATGACAAATAC	NA	False	NA	NA	False	AATAAA	-25	NA	79498704	79511121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.29	chr3	+	3245	1	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	47	-652	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	705	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	79498718	79501963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498700_79502000
ES.21697.3	chr3	+	1773	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	-22	1	1	-1	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGATGTCCTTTCCT	NA	False	NA	28	True	AATAAA	-18	NA	79498649	79510956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.30	chr3	+	3554	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	52	-9	intron_retention	FALSE	canonical	2	3	junction_4	1054.75050001598	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAGTGAATCTCA	NA	False	NA	7	True	AATAAA	-6	NA	79498723	79510574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79504869_79504991_79505181_79506114_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.31	chr3	+	3608	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	53	1	intron_retention	FALSE	canonical	0	0	junction_3	819.649172165811	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATCTCATTTTAAAATG	NA	False	NA	17	True	AATAAA	-16	NA	79498724	79510584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79504898_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.32	chr3	+	4518	7	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	53	6	intron_retention	FALSE	canonical	0	0	junction_3	950.523656845121	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTTTAAAATGTTTGT	NA	False	NA	22	True	AATAAA	-21	NA	79498724	79510589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.35	chr3	+	3567	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	79	131	56	-131	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATTGATTATATAAAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	79498727	79510452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.36	chr3	+	1288	9	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	57	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	855.71355458471	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAATGTTTGTCTGC	NA	False	NA	26	True	AATAAA	-25	NA	79498728	79510593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79510337
ES.21697.37	chr3	+	3945	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	57	-3	intron_retention	FALSE	canonical	3	73	junction_3	797.54397688261	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	False	NA	26	True	AATAAA	-16	NA	79498728	79510954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79504869_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.38	chr3	+	1317	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	57	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	820.692856939854	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCATTTTAAAATGTTT	NA	False	NA	20	True	AATAAA	-19	NA	79498728	79510587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506214_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.39	chr3	+	1868	9	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	58	371	58	3	intron_retention	FALSE	canonical	3	2177	junction_5	231.839080775869	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTCATTTTAAAATGTT	NA	False	NA	19	True	AATAAA	-18	NA	79498729	79510586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749
ES.21697.4	chr3	+	1295	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	-10	467	-10	-93	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGCTCCCTGTTGTGTT	NA	False	NA	-77	True	TATAAA	-21	NA	79498661	79510490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.40	chr3	+	1337	11	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	-60	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1023.44702354348	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACAGTGAATCTCA	NA	False	NA	7	True	AATAAA	-6	NA	79498734	79510574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79498865_79500916_79501058_79502508_79502616_79503398_79503506_79505067_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.41	chr3	+	8052	5	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	2238	junction_2	140.257798357168	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79498771	79510955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79509666_79509749_79509793_79510337
ES.21697.42	chr3	+	3523	7	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	-76	8	intron_retention	FALSE	canonical	0	0	junction_6	971.167410330932	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTAAAATGTTTGTCT	NA	False	NA	24	True	AATAAA	-23	NA	79500919	79510591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79510337
ES.21697.43	chr3	+	1594	10	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	1060.98348272595	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGGATGTCCTTTCC	NA	False	NA	27	True	AATAAA	-17	NA	79500986	79510955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79501058_79502508_79502616_79503398_79503506_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.44	chr3	+	6109	5	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	-483	-3	intron_retention	FALSE	canonical	3	2177	junction_1	264.855975012836	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	False	NA	26	True	AATAAA	-16	NA	79502980	79510954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79506222_79506358_79506466_79507564_79509666_79509749_79509793_79510337
ES.21697.45	chr3	+	5085	5	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	171	1	intron_retention	FALSE	canonical	3	2177	junction_1	264.855975012836	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATCTCATTTTAAAATG	NA	False	NA	17	True	AATAAA	-16	NA	79503634	79510584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79506222_79506358_79506466_79507564_79509666_79509749_79509793_79510337
ES.21697.46	chr3	+	2968	1	Genic_Genomic	ENSMUSG00000027804.14	novel	NA	NA	NA	NA	4572	2598	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAAAGCTATCACTAAG	NA	False	NA	NA	False	NA	NA	NA	79510587	79513555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_79510600_79513600
ES.21697.5	chr3	+	3776	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	16	-15	-7	15	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGTCTGCATTTT	NA	False	NA	31	True	AATAAA	-30	NA	79498664	79510598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.6	chr3	+	4135	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	16	-374	-7	0	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGATGTCCTTTCCTG	NA	False	NA	29	True	AATAAA	-19	NA	79498664	79510957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.7	chr3	+	5051	8	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGATGTCCTTTCCTG	NA	False	NA	29	True	AATAAA	-19	NA	79498666	79510957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.8	chr3	+	1912	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	9	-169	9	169	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACAAATACTTCAT	NA	False	NA	NA	False	AATAAA	-30	NA	79498680	79511126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21697.9	chr3	+	4537	8	NIC	ENSMUSG00000027804.14	novel	3777	9	NA	NA	10	-125	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTATATAAAGGACAAGG	NA	False	NA	NA	False	ATTAAA	-22	NA	79498681	79510458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ES.21698.1	chr3	+	155	1	Intergenic	novelGene_17940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTCTGACTGTTAG	NA	False	NA	NA	False	NA	NA	NA	79516903	79517058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79516900_79517100
ES.21699.1	chr3	+	176	1	Intergenic	novelGene_17941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGTGTGCG	726	False	NA	NA	False	NA	NA	NA	79532742	79532918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_79532700_79532900
ES.217.1	chr1	-	1218	3	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	31773464	31769671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_31770591_31771971_31772096_31773289
ES.2170.1	chr1	-	11213	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-33	-50	-33	50	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTACATATGATTTAAC	NA	False	NA	NA	False	NA	NA	NA	189420316	189372752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.10	chr1	-	8707	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	6	-999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.6138537430982	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGTAGTAGATGATCT	NA	False	NA	-11	True	AATAAA	-22	NA	189420277	189373801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189390259_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.11	chr1	-	6193	6	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	31800	999	-7430	-999	3prime_fragment	FALSE	canonical	3	232	junction_3	17.993332098308	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGTAGTAGATGATCT	NA	False	NA	-11	True	AATAAA	-22	NA	189388483	189373801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457
ES.2170.13	chr1	-	10140	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-9	-1000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.3319054416449	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAGTAGTAGATGATC	NA	False	NA	-12	True	AATAAA	-21	NA	189420292	189373802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189374994_189378991_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.14	chr1	-	9655	15	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	3004	-1002	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	74.2253875925569	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTAGTAGTAGATGA	NA	False	NA	-14	True	AATAAA	-19	NA	189417228	189373804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141
ES.2170.15	chr1	-	10070	18	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	5	-1004	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	65.9448233236195	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAGTTAGTAGTAGAT	NA	False	NA	-16	True	AATAAA	-17	NA	189420278	189373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.16	chr1	-	10037	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-32	1125	-32	965	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTCCCATCTGTCTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	189420315	189373927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.17	chr1	-	7255	7	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-10178	961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	100.39754313063	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAATGTTCCCATCTGT	NA	False	NA	NA	False	ATTAAA	-39	NA	189391231	189373931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382762_189382919_189383344_189383498_189384457_189387290_189388841
ES.2170.18	chr1	-	10225	19	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-9	960	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	77.4098440162315	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGAATGTTCCCATCTG	NA	False	NA	NA	False	ATTAAA	-38	NA	189420292	189373932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189416729_189416864_189417059_189417336_189420172
ES.2170.19	chr1	-	10108	19	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-29	823	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	77.4098440162315	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420312	189374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189416729_189416864_189417059_189417336_189420172
ES.2170.2	chr1	-	11011	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_9	68.2238674786911	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAACAGGCTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	189420293	189372802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.20	chr1	-	9901	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-38	1267	-38	823	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420321	189374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.21	chr1	-	9506	16	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-17	823	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	84.2257284523757	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420249	189374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189417141_189417336_189420172
ES.2170.22	chr1	-	9768	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	5	823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	66.4105402898643	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420278	189374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412614_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.23	chr1	-	9818	18	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-6	823	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	65.9448233236195	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420289	189374069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.24	chr1	-	9697	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-32	822	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	68.5127725318426	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTCTTTGAATGTGT	NA	False	NA	57	True	AGTAAA	-17	NA	189420315	189374070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189417141_189417336_189420172
ES.2170.25	chr1	-	11679	16	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-23	820	intron_retention	FALSE	canonical	3	128	junction_7	51.4922216348148	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACATGTCTTTGAATGT	NA	False	NA	55	True	AGTAAA	-15	NA	189420306	189374072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189417336_189420172
ES.2170.26	chr1	-	6989	4	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-3538	820	intron_retention	FALSE	canonical	3	232	junction_2	17.326921891156	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACATGTCTTTGAATGT	NA	False	NA	55	True	AGTAAA	-15	NA	189384591	189374072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189379178_189380807_189381285_189382758_189382919_189383344
ES.2170.27	chr1	-	10019	19	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	6	820	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	86.0239881847492	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACATGTCTTTGAATGT	NA	False	NA	55	True	AGTAAA	-15	NA	189420277	189374072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189416729_189416864_189417059_189417336_189420172
ES.2170.28	chr1	-	9752	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-17	817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.2063907819615	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATACATGTCTTTGAA	NA	False	NA	52	True	AGTAAA	-12	NA	189420249	189374075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189416035_189416162_189417141_189417336_189420172
ES.2170.29	chr1	-	9742	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-17	814	combination_of_known_splicesites	FALSE	canonical	1	9	junction_9	68.2238674786911	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATGATACATGTCTTT	NA	False	NA	49	True	AGTAAA	-9	NA	189420300	189374078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.3	chr1	-	7365	7	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	29712	363	-9518	-363	3prime_fragment	FALSE	canonical	3	192	junction_6	31.7157514318814	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGCAGGTCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	189390571	189373165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841
ES.2170.31	chr1	-	9759	19	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	5	763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.7581849573792	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTCTTCTTAACTA	NA	False	NA	-2	True	TATAAA	-17	NA	189420278	189374129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189385304_189385342_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.32	chr1	-	9793	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-38	1375	-38	715	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTAAAAGTTATTT	NA	False	NA	0	True	ATTAAA	-16	NA	189420321	189374177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.34	chr1	-	9728	18	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-24	715	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	65.9448233236195	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTAAAAGTTATTT	NA	False	NA	0	True	ATTAAA	-16	NA	189420307	189374177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.35	chr1	-	6434	7	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-9595	715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.39754313063	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTAAAAGTTATTT	NA	False	NA	0	True	ATTAAA	-16	NA	189390648	189374177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381289_189382758_189382919_189383344_189383498_189384457_189387290_189388841
ES.2170.37	chr1	-	9552	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	6	715	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	68.5127725318426	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTAAAAGTTATTT	NA	False	NA	0	True	ATTAAA	-16	NA	189420277	189374177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189417141_189417336_189420172
ES.2170.38	chr1	-	2339	2	ISM	ENSMUSG00000026605.15	ENSMUST00000165798.2	358	3	535	-712	535	712	3prime_fragment	FALSE	canonical	3	287	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTTTGTAAAAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	189380518	189374180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189375000_189378998
ES.2170.39	chr1	-	9707	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-28	712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.5732159324212	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTTTGTAAAAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	189420311	189374180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412631_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.4	chr1	-	10194	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-51	987	-51	-987	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATCTGTTCTTGGCTTT	NA	False	NA	1	True	AATAAA	-34	NA	189420334	189373789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.41	chr1	-	9691	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-24	712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	67.2063907819615	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTTTGTAAAAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	189420307	189374180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189416049_189416162_189417141_189417336_189420172
ES.2170.42	chr1	-	9616	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	20	711	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	68.8457288072397	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTTTGTAAAAGTT	NA	False	NA	-4	True	ATTAAA	-12	NA	189420263	189374181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189417059_189417336_189420172
ES.2170.43	chr1	-	9861	19	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	24	711	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	77.1656867388384	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTTTTGTAAAAGTT	NA	False	NA	-4	True	ATTAAA	-12	NA	189420259	189374181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189416729_189416864_189417141_189417336_189420172
ES.2170.44	chr1	-	8590	16	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	-17	8186	-17	-6096	5prime_fragment	FALSE	canonical	3	128	junction_5	41.4243084834658	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAGGCAAGAGGCAAAG	NA	False	NA	NA	False	AATAAA	-1	NA	189420300	189380988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.45	chr1	-	177	1	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTACCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	189381543	189381366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_189381400_189381500
ES.2170.46	chr1	-	5327	2	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	29786	10816	-9444	7303	internal_fragment	FALSE	canonical	3	192	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	189390497	189383618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189387290_189388841
ES.2170.47	chr1	-	3139	10	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	6	-1702	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	48.2124926180388	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAATAAAACTAAATACTC	NA	False	NA	NA	False	AATAAA	-4	NA	189420277	189392623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189394330_189400712_189400836_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.48	chr1	-	1186	1	FSM	ENSMUSG00000026605.15	ENSMUST00000194624.2	3389	1	2157	46	2157	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAATATTCAAT	1584	False	NA	NA	False	NA	NA	NA	189401182	189399996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_189400000_189401200
ES.2170.49	chr1	-	2442	9	ISM	ENSMUSG00000026605.15	ENSMUST00000165962.2	3001	12	-14	11289	-14	-2260	5prime_fragment	FALSE	canonical	3	9	junction_3	51.3024122239881	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATATTGTGATCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	189420297	189402210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.7	chr1	-	10176	18	NNC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	-28	-997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.8716814832812	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAGTAGATGATCTGT	NA	False	NA	-9	True	AATAAA	-24	NA	189420311	189373799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189375000_189378998_189379193_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.2170.8	chr1	-	9951	17	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	2	-997	combination_of_known_splicesites	FALSE	canonical	1	9	junction_9	80.0402242625544	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAGTAGATGATCTGT	NA	False	NA	-9	True	AATAAA	-24	NA	189420281	189373799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ES.21700.1	chr3	-	188	1	Intergenic	novelGene_17937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTATTTTATG	9161	False	NA	NA	False	NA	NA	NA	79500168	79499980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79500000_79500200
ES.21701.1	chr3	-	2381	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	-4	0	-4	0	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTTTCAAGTCCTTC	3580	False	NA	0	True	AATAAA	-30	NA	79536174	79511094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ES.21701.2	chr3	-	2291	14	NNC	ENSMUSG00000027809.15	novel	2377	13	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.3637217684754	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACGAGAGCATTTAT	3739	False	NA	-22	True	AATAAA	-8	NA	79536015	79511116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79511473_79512211_79512434_79512936_79513120_79515618_79515710_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ES.21701.4	chr3	-	266	1	Intergenic	novelGene_17938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAAATGAATGTTCTCT	6354	False	NA	NA	False	NA	NA	NA	79515028	79514762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79514800_79515000
ES.21701.5	chr3	-	172	1	Intergenic	novelGene_17939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGCTTGCA	9852	False	NA	NA	False	NA	NA	NA	79516108	79515936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_79515900_79516100
ES.21701.6	chr3	-	3759	3	FSM	ENSMUSG00000027809.15	ENSMUST00000149511.2	3740	3	-10	-9	-10	9	multi-exon	FALSE	canonical	3	110	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACACTCATTTTTTGT	3719	False	NA	NA	False	AATAAA	-20	NA	79536035	79526864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79530275_79530847_79530986_79535824
ES.21701.7	chr3	-	3243	3	FSM	ENSMUSG00000027809.15	ENSMUST00000149511.2	3740	3	-15	512	6	-512	multi-exon	FALSE	canonical	3	110	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTATGCCTAGTAAAG	3714	False	NA	NA	False	AATAAA	-20	NA	79536040	79527385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79530275_79530847_79530986_79535824
ES.21702.1	chr3	+	2012	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	-45	3	-45	-3	multi-exon	FALSE	canonical	3	150	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCCGTTTCTTTAGAC	4324	False	NA	NA	False	AATAAA	-11	NA	79536340	79540124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79536664_79538435
ES.21702.2	chr3	+	2771	2	NNC	ENSMUSG00000027811.10	novel	1970	2	NA	NA	15	900	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTTTCTTCTTTTTAT	4384	False	NA	NA	False	TATAAA	-17	NA	79536400	79541027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79536580_79538435
ES.21702.3	chr3	+	615	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	25	1330	25	-1330	multi-exon	FALSE	canonical	3	150	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGCTTTTGTCGACTCC	4394	False	NA	NA	False	NA	NA	NA	79536410	79538797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79536664_79538435
ES.21702.4	chr3	+	1854	2	NNC	ENSMUSG00000027811.10	novel	1970	2	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCCGTTTCTTTAGAC	4398	False	NA	NA	False	AATAAA	-11	NA	79536414	79540124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79536580_79538435
ES.21702.5	chr3	+	10216	3	NNC	ENSMUSG00000027811.10	novel	1970	2	NA	NA	53	14956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	75	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTGTTTTGAGG	4422	False	NA	NA	False	AATAAA	-16	NA	79536438	79555083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79536664_79538435_79541458_79548114
ES.21702.6	chr3	+	2848	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	69	-947	69	947	multi-exon	FALSE	canonical	3	150	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACTGTAAAATCCACC	4438	False	NA	NA	False	ATTAAA	-18	NA	79536454	79541074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79536664_79538435
ES.21703.1	chr3	-	7338	9	NNC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	72	-1	intron_retention	FALSE	canonical	2	2	junction_4	8.30286095270781	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTCTTCTTTAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	79750147	79719871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79735004_79739373_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
ES.21703.2	chr3	-	2803	12	FSM	ENSMUSG00000027956.12	ENSMUST00000029568.7	2898	12	93	2	93	-2	multi-exon	FALSE	canonical	0	0	junction_11	7.83085653358474	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTTTCTTCTTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	79749893	79719872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79749694
ES.21703.3	chr3	-	2754	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTTTCTTCTTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	79750227	79719872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
ES.21703.5	chr3	-	3471	11	NNC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-5	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	10.3556747727997	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTATTTCTTTTCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	79750224	79719878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_79721454_79724323_79724379_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79735004_79739358_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
ES.21703.7	chr3	-	2184	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGCACATTGCTCACAA	NA	False	NA	NA	False	NA	NA	NA	79750226	79720441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
ES.21704.1	chr3	+	2780	4	NIC	ENSMUSG00000027955.17	novel	6729	5	NA	NA	-82	-2886	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGTTTTCAGTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	79791757	79850699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_79791998_79815895_79816111_79843901_79844129_79848601
ES.21704.2	chr3	+	3878	5	FSM	ENSMUSG00000027955.17	ENSMUST00000118853.8	6729	5	-45	2896	-45	-2894	multi-exon	FALSE	canonical	0	0	junction_1	2.77263412660235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCATCTCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	79791794	79850691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_79791998_79793294_79794438_79815895_79816111_79843901_79844129_79848601
ES.21704.3	chr3	+	4098	6	NNC	ENSMUSG00000027955.17	novel	6729	5	NA	NA	-36	-2896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.57681974534503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCTCATCTCCTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	79791803	79850689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_79791998_79792302_79792534_79793294_79794438_79815895_79816111_79843901_79844129_79848601
ES.21704.4	chr3	+	5430	3	ISM	ENSMUSG00000027955.17	ENSMUST00000029567.9	6627	4	22662	-7	22536	5	3prime_fragment	FALSE	canonical	3	5	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTGAAAGTTATTAT	NA	False	NA	NA	False	AATAAA	-26	NA	79815898	79853592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_79816111_79843901_79844129_79848601
ES.21705.1	chr3	+	176	1	Intergenic	novelGene_17942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	80406249	80406425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_80406200_80406400
ES.21706.1	chr3	-	3702	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	25	-698	-21	698	multi-exon	TRUE	canonical	3	21	junction_1	6.91214711777591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTTGGATTCCCCA	NA	False	NA	NA	False	AATAAA	-14	NA	80820942	80750207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ES.21706.10	chr3	-	3088	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-108250	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.7475421681038	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATTTGCTCTTTAC	NA	False	NA	-18	True	ATTAAA	-15	NA	80929217	80750912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80882737_80882869_80929138
ES.21706.12	chr3	-	2545	11	NIC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-20	-610	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	15.4107105611649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATTTTCATGCCTTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	80820941	80751515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80816093_80816246_80819274_80819426_80820823
ES.21706.2	chr3	-	3295	13	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-108235	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.5988202392017	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	-12	True	ATTAAA	-21	NA	80929202	80750906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80757734_80757783_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80881570_80881739_80921471_80921603_80929138
ES.21706.3	chr3	-	3046	11	NNC	ENSMUSG00000028020.17	novel	2979	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.2463110292293	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	-12	True	ATTAAA	-21	NA	80820917	80750906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80757734_80757807_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787036_80819274_80819426_80820823
ES.21706.4	chr3	-	3154	11	NIC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	15.4107105611649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTCTTTACTGCTAT	NA	False	NA	-12	True	ATTAAA	-21	NA	80820941	80750906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80816093_80816246_80819274_80819426_80820823
ES.21706.5	chr3	-	3301	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.4107105611649	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTTGCTCTTTACTGCT	NA	False	NA	-14	True	ATTAAA	-19	NA	80820893	80750908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80789870_80790220_80819274_80819426_80820823
ES.21706.6	chr3	-	3002	10	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	-108276	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.2274930047555	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTGCTCTTTACTG	NA	False	NA	-16	True	ATTAAA	-17	NA	80929243	80750910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80881570_80881739_80929138
ES.21706.8	chr3	-	3024	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	0	5	0	-5	multi-exon	FALSE	canonical	3	21	junction_1	6.91214711777591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTGCTCTTTACTG	NA	False	NA	-16	True	ATTAAA	-17	NA	80820967	80750910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ES.21706.9	chr3	-	3066	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	12.2918672300021	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTGCTCTTTACTG	NA	False	NA	-16	True	ATTAAA	-17	NA	80820961	80750910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_80752565_80757734_80757783_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ES.21707.1	chr3	+	4493	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	-844	-128	-844	128	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCATTGTAGAAAAACATC	NA	False	NA	NA	False	AATAAA	-19	NA	80942878	81121475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ES.21707.2	chr3	+	3549	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	-23	-5	-23	5	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTAAGTGTATGTGGTGT	NA	False	NA	51	True	AATAAA	-36	NA	80943699	81121352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ES.21707.3	chr3	+	3349	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	-531	0	225	0	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80943947	81121341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ES.21707.4	chr3	+	3075	5	NIC	ENSMUSG00000028019.10	novel	3521	6	NA	NA	256	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.4145097382415	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTAAGTGTTCGTCTA	NA	False	NA	37	True	AATAAA	-22	NA	80943978	81121338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_80944862_81048711_81048908_81111541_81111750_81116350_81116569_81119768
ES.21707.5	chr3	+	3287	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	870	-636	114	636	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTTTGCCCTTTTGTC	NA	False	NA	NA	False	AATAAA	-23	NA	80944592	81121983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ES.21707.6	chr3	+	3629	1	Intergenic	novelGene_17944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	81075346	81078975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_81075300_81079000
ES.21708.1	chr3	-	171	1	Intergenic	novelGene_17943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	81023528	81023357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_81023400_81023500
ES.21709.1	chr3	+	174	1	Intergenic	novelGene_17945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	81333332	81333506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_81333300_81333500
ES.2171.1	chr1	+	162	1	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTTTAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	189431842	189432004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_189431800_189432000
ES.21710.1	chr3	+	175	1	Intergenic	novelGene_17946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	81736745	81736920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_81736700_81736900
ES.21711.1	chr3	+	3579	7	NIC	ENSMUSG00000028015.4	novel	3468	8	NA	NA	0	-1151	intron_retention	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTAGTCTATGATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	81839929	81862881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_81840083_81848838_81848945_81849499_81849640_81852168_81853743_81858679_81858844_81859505_81859599_81861532
ES.21711.2	chr3	+	2268	8	FSM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	48	1152	6	-1152	multi-exon	FALSE	canonical	0	0	junction_2	0.494871659305393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGTAGTCTATGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	81839955	81862880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_81840083_81848838_81848945_81849499_81849640_81852168_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ES.21712.1	chr3	-	4244	3	NNC	ENSMUSG00000028005.14	novel	3223	14	NA	NA	-10	-18706	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AATGAA	-27	NA	81982006	81977068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_81977610_81977803_81981379_81981878
ES.21713.1	chr3	+	3913	13	ISM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	-10	9465	-10	2211	5prime_fragment	TRUE	canonical	0	0	junction_6	3.06752705321766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGTTGGTATTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	82265368	82293110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151
ES.21713.2	chr3	+	6171	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	47	0	47	0	multi-exon	FALSE	canonical	0	0	junction_6	2.99111109157286	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTAACTGACGTTTTT	NA	False	NA	5	True	AATAAA	-17	NA	82265425	82302575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
ES.21713.3	chr3	+	2284	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	140	3794	25	-3794	multi-exon	FALSE	canonical	0	0	junction_6	2.99111109157286	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCTGGTGTGGGGTGA	NA	False	NA	NA	False	NA	NA	NA	82265518	82298781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
ES.21713.4	chr3	+	4841	6	ISM	ENSMUSG00000033900.14	ENSMUST00000195640.2	6162	14	21888	3	2	-3	3prime_fragment	FALSE	canonical	2	3	junction_3	1.72046505340853	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGGTAACTGACGTT	NA	False	NA	2	True	AATAAA	-14	NA	82287381	82302572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
ES.21714.1	chr3	+	159	1	Intergenic	novelGene_17947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAATAAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	82595495	82595654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_82595500_82595700
ES.21715.1	chr3	-	242	1	Intergenic	novelGene_17948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCTCAAAGATGATAC	NA	False	NA	38	True	NA	NA	NA	82649615	82649373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_82649400_82649600
ES.21715.2	chr3	-	138	1	Intergenic	novelGene_17949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAAATATCTAAT	NA	False	NA	-64	True	NA	NA	NA	82649613	82649475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_82649500_82649600
ES.21716.1	chr3	-	3660	6	NIC	ENSMUSG00000033882.16	novel	2115	5	NA	NA	-75	704	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	1.67332005306815	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTGTTTTGTTTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	82783865	82743830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_82745767_82749780_82749841_82771211_82771995_82772511_82772980_82773792_82773955_82783614
ES.21716.2	chr3	-	7616	5	NNC	ENSMUSG00000033882.16	novel	2115	5	NA	NA	-44	702	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	1.6393596310755	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGTGTGTTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	82783834	82743832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_82749841_82771211_82771995_82772511_82772980_82773792_82773955_82783639
ES.21716.3	chr3	-	3573	6	NNC	ENSMUSG00000033882.16	novel	2115	5	NA	NA	-17	700	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.46969384566991	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAATGTGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	82783807	82743834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_82745767_82749780_82749841_82771211_82771995_82772511_82772980_82773792_82773955_82783639
ES.21717.1	chr3	-	4783	5	Fusion	ENSMUSG00000102595.2_ENSMUSG00000028003.7	novel	447	4	NA	NA	52	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGTCTTTTAATTT	1132	False	NA	NA	False	AATAAA	-17	NA	82902840	82799886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_82804163_82804257_82804436_82833925_82834082_82894822_82894909_82902753
ES.21717.2	chr3	-	5115	6	Fusion	ENSMUSG00000102595.2_ENSMUSG00000028003.7	novel	447	4	NA	NA	57	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.8	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTTGTCTTTTAAT	1137	False	NA	NA	False	AATAAA	-15	NA	82902835	82799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_82804436_82833925_82834082_82863683_82863812_82892027_82892144_82894822_82894909_82902753
ES.21717.3	chr3	-	4730	5	Fusion	ENSMUSG00000102595.2_ENSMUSG00000028003.7	novel	5351	2	NA	NA	-1705	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTTGTCTTTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	82904597	82799888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_82804163_82804257_82804436_82863683_82863812_82894822_82894909_82904533
ES.21717.4	chr3	-	1069	5	Fusion	ENSMUSG00000102595.2_ENSMUSG00000028003.7	novel	447	4	NA	NA	73	-3959	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGATGAATATATGT	1153	False	NA	NA	False	ATTAAA	-15	NA	82902819	82803844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_82804436_82833925_82834136_82892027_82892144_82894822_82894909_82902753
ES.21717.5	chr3	-	1019	4	NNC	ENSMUSG00000102595.2	novel	447	4	NA	NA	60	587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATTTAGTATTTCT	1140	False	NA	NA	False	AATAAA	-16	NA	82902832	82833384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_82834136_82892027_82892131_82894822_82894909_82902753
ES.21718.1	chr3	+	2084	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	-2	-341	-2	-3	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGACATTCCGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	82915165	82922353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
ES.21718.2	chr3	+	1557	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	136	2	-1	-2	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGACATTCCGTGGC	NA	False	NA	NA	False	AATAAA	-14	NA	82915166	82922354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
ES.21718.3	chr3	+	1665	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	0	76	0	-76	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCAGCTGTAATTATTG	NA	False	NA	NA	False	ATTAAA	-29	NA	82915167	82921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
ES.21719.1	chr3	-	171	1	Intergenic	novelGene_17950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACAACAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	82943792	82943621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_82943600_82943800
ES.2172.1	chr1	+	3632	13	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-73	24715	-73	4	5prime_fragment	FALSE	canonical	3	11	junction_2	5.22812904711937	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGGATTGTAGTTGC	NA	False	NA	6	True	AATAAA	-19	NA	189460391	189584177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ES.2172.10	chr1	+	3003	12	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	10528	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.99468511333504	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTTGGATTGTAGT	NA	False	NA	3	True	AATAAA	-16	NA	189529396	189584174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189529554_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ES.2172.11	chr1	+	3306	12	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	10545	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.79936798229642	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	4	True	AATAAA	-17	NA	189529413	189584175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189529873_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ES.2172.12	chr1	+	2928	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	245	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGACTGATCTGCAGTG	NA	False	NA	NA	False	AATATA	-21	NA	189576863	189602510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.13	chr1	+	2119	3	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTGTTGGATTGTAG	NA	False	NA	2	True	AATAAA	-15	NA	189576863	189584173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189576951_189578530_189578610_189582220
ES.2172.14	chr1	+	6047	9	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-376	-3263	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	6.18339510301582	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTTTGTAATAACTTA	NA	False	NA	NA	False	AATAAA	-25	NA	189576863	189605629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.15	chr1	+	7597	8	NNC	ENSMUSG00000026604.18	novel	3810	2	NA	NA	-373	-3275	intron_retention	FALSE	canonical	3	10	junction_1	6.60550172668394	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGCCTTGACCCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	189576866	189605617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189576951_189578530_189578610_189582220_189583705_189587121_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.16	chr1	+	2883	7	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	121556	6461	4781	166	3prime_fragment	FALSE	canonical	3	10	junction_5	3.54729944229879	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTTCTGTGAGTTATT	NA	False	NA	NA	False	NA	NA	NA	189582020	189602431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.17	chr1	+	2018	5	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	68113	3546	-7874	3089	internal_fragment	FALSE	canonical	3	10	junction_4	3.89711431702997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTGTGGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	189586981	189598719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568
ES.2172.2	chr1	+	4547	20	NNC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	-13	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.89212485678773	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTTGACTGATCTGCAG	NA	False	NA	NA	False	AATATA	-19	NA	189460451	189602508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189460862_189478307_189478480_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.3	chr1	+	4375	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	-11	6382	-11	245	multi-exon	FALSE	canonical	3	10	junction_17	4.78713553878169	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGACTGATCTGCAGTG	NA	False	NA	NA	False	AATATA	-21	NA	189460453	189602510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.4	chr1	+	4403	14	NNC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.95772855700559	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGATTGTAGTT	NA	False	NA	4	True	AATAAA	-17	NA	189460456	189584175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189460862_189478307_189479146_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ES.2172.6	chr1	+	10426	18	NIC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.16890292692301	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTTTTGGTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	189460471	189608892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_189460862_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ES.2172.8	chr1	+	3678	14	NNC	ENSMUSG00000026604.18	novel	10746	19	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.82047078593159	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATATTGTTGGATTGT	NA	False	NA	0	True	AATAAA	-13	NA	189460486	189584171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_189460862_189503843_189503991_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ES.2172.9	chr1	+	179	1	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATCAACTCAGTA	NA	False	NA	NA	False	NA	NA	NA	189468638	189468817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_189468600_189468800
ES.21720.1	chr3	+	2074	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	-208	-15	-208	15	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTCCTAACACTA	NA	False	NA	22	True	AGTAAA	-32	NA	82962620	82979677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ES.21720.12	chr3	+	1656	14	ISM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	1247	64	1214	2	3prime_fragment	FALSE	canonical	3	670	junction_5	50.5578349472781	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTTTTATTTCTGAA	NA	False	NA	26	True	AATAAA	-18	NA	82964075	82979598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ES.21720.13	chr3	+	728	5	ISM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	13439	64	-12	2	3prime_fragment	FALSE	canonical	3	698	junction_2	24.8797106092495	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTTTTATTTCTGAA	NA	False	NA	26	True	AATAAA	-18	NA	82976267	82979598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ES.21720.2	chr3	+	3043	13	NIC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	-7	3	intron_retention	FALSE	canonical	3	670	junction_6	51.1068461384796	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTTTATTTCTGAAA	NA	False	NA	27	True	AATAAA	-19	NA	82962821	82979599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82978691_82979417
ES.21720.4	chr3	+	1758	15	NNC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	194.228943911718	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTGTTTTATTTCTG	NA	False	NA	24	True	AATAAA	-16	NA	82962845	82979596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978672_82979408
ES.21720.5	chr3	+	1505	11	ISM	ENSMUSG00000027998.12	ENSMUST00000029628.11	1749	15	8	2865	8	359	5prime_fragment	FALSE	canonical	3	670	junction_6	55.7624425576929	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCATTGGAGTTTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	82962846	82976731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268
ES.21720.6	chr3	+	4499	11	NIC	ENSMUSG00000027998.12	novel	1749	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	670	junction_6	46.6287464982708	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTGTTTTATTTCTG	NA	False	NA	24	True	AATAAA	-16	NA	82962847	82979596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82976372_82976999_82978044_82978496_82978691_82979417
ES.21720.8	chr3	+	2989	14	NIC	ENSMUSG00000027998.12	novel	1851	15	NA	NA	-9	2	intron_retention	FALSE	canonical	3	670	junction_6	50.7822827045653	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTTTTATTTCTGAA	NA	False	NA	26	True	AATAAA	-18	NA	82962852	82979598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ES.21720.9	chr3	+	1725	15	NNC	ENSMUSG00000027998.12	novel	1749	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	260.641790312189	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCTGTGTTTTATTTCT	NA	False	NA	23	True	AATAAA	-15	NA	82962857	82979595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977929_82978044_82978496_82978691_82979421
ES.21721.1	chr3	+	1437	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	-49	615	-49	-615	multi-exon	FALSE	canonical	3	19	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAGAACAGCTCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	83673578	83681008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_83674351_83676632_83676714_83680424
ES.21721.2	chr3	+	1954	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	28	21	28	-21	multi-exon	FALSE	canonical	3	19	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATCTTGTTGTACCTAT	NA	False	NA	0	True	TATAAA	-3	NA	83673655	83681602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_83674351_83676632_83676714_83680424
ES.21722.1	chr3	-	3344	1	Antisense	novelGene_ENSMUSG00000027996.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTTCACTAGTATGAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	83678987	83675643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_83675600_83679000
ES.21723.1	chr3	+	207	1	Intergenic	novelGene_17951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAACTGTGAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	83737584	83737791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_83737600_83737800
ES.21724.1	chr3	-	2885	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	128	1	128	-1	multi-exon	FALSE	canonical	3	25	junction_2	5.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGTTTCTCTGTTTTT	NA	False	NA	-2	True	TATAAA	-15	NA	83748946	83743579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_83746097_83748195_83748444_83748826
ES.21724.3	chr3	-	2827	2	NNC	ENSMUSG00000027995.11	novel	3014	3	NA	NA	431	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACCGGTTTCTCTGTT	NA	False	NA	-5	True	TATAAA	-12	NA	83748643	83743582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83746097_83748330
ES.21724.4	chr3	-	3156	2	NNC	ENSMUSG00000027995.11	novel	3014	3	NA	NA	431	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGAGACCGGTTTCTCTG	NA	False	NA	-7	True	TATAAA	-10	NA	83748643	83743584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83746097_83747999
ES.21725.1	chr3	-	4011	7	Intergenic	novelGene_17952	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATTTCTTGTAAGT	2936	False	NA	NA	False	NA	NA	NA	83771735	83757763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_83759271_83760917_83760970_83762225_83762538_83764596_83766089_83766925_83767159_83767570_83767794_83771543
ES.21725.2	chr3	-	5254	2	Intergenic	novelGene_17953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTTTGACTAT	2917	False	NA	NA	False	AATATA	-13	NA	83771754	83762115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_83767159_83771543
ES.21726.1	chr3	+	214	1	Intergenic	novelGene_17954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCCCTTTCTGTTTAA	4453	False	NA	NA	False	AAGAAA	-10	NA	83778306	83778520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_83778300_83778500
ES.21727.1	chr3	+	656	1	Intergenic	novelGene_17955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6739	False	NA	NA	False	TATAAA	-44	NA	83887551	83888207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_83887600_83888200
ES.21728.1	chr3	-	7495	29	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	5875	2	intron_retention	FALSE	canonical	3	49	junction_6	12.6333701290007	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACTTTGTCTTCATTGG	NA	False	NA	NA	False	AATAAA	-43	NA	83869660	83804959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604
ES.21728.13	chr3	-	4190	34	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.2366622174784	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947426	83805511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829822_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.16	chr3	-	5101	36	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	22.5658220885172	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947494	83805511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83876698_83876783_83938915_83938960_83946621_83946693_83947283
ES.21728.18	chr3	-	5272	36	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.9796005364829	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTATTTTTGCTTT	NA	False	NA	-22	True	AATAAA	-18	NA	83947445	83805511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807910_83808039_83808160_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.2	chr3	-	5501	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	55	-1	8	1	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTTTGTCTTCATTG	NA	False	NA	NA	False	AATAAA	-42	NA	83947427	83804960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.20	chr3	-	4764	34	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	20.0660525427017	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTATTTTTGCTT	NA	False	NA	-23	True	AATAAA	-17	NA	83947467	83805512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847871_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.21	chr3	-	4947	35	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	21.7311346812096	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTATTTTTGCTT	NA	False	NA	-23	True	AATAAA	-17	NA	83947475	83805512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844775_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.22	chr3	-	4816	33	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	21.9516514185152	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTATTTTTGCT	NA	False	NA	-24	True	AATAAA	-16	NA	83947420	83805513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83946630_83946693_83947283
ES.21728.23	chr3	-	7402	33	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	2	intron_retention	FALSE	canonical	3	49	junction_6	12.6725204058822	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTATTTTTGCT	NA	False	NA	-24	True	AATAAA	-16	NA	83947467	83805513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.24	chr3	-	4943	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_34	18.7597264276465	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947467	83805515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947326
ES.21728.25	chr3	-	3782	24	NNC	ENSMUSG00000033767.15	novel	4815	34	NA	NA	4670	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	22.4473338668887	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83846380	83805515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83846281
ES.21728.27	chr3	-	4893	35	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.7456980989136	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTATTTTT	NA	False	NA	-27	True	AATAAA	-13	NA	83947467	83805516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816638_83817726_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844863_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.28	chr3	-	5992	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	0	intron_retention	FALSE	canonical	3	49	junction_6	12.1592584714217	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTATTTTT	NA	False	NA	-27	True	AATAAA	-13	NA	83947440	83805516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.29	chr3	-	4342	28	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_27	20.1880052396356	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTATTTTT	8639	False	NA	-27	True	AATAAA	-13	NA	83851106	83805516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83850846
ES.21728.31	chr3	-	4498	29	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_28	18.5486123580219	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTGTTTATTTT	8665	False	NA	-28	True	AATAAA	-12	NA	83851080	83805517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83850846
ES.21728.33	chr3	-	4693	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	-76	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	14.3287519105165	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGTTGTCGCGATAGA	NA	False	NA	-103	True	AATAAA	-27	NA	83947434	83805592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.34	chr3	-	4892	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	21	642	7	-87	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTAGCGTAAACTGGTT	NA	False	NA	-114	True	AATAAA	-16	NA	83947461	83805603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.36	chr3	-	5436	26	ISM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	19	19420	5	3736	5prime_fragment	FALSE	canonical	3	61	junction_10	10.2179449988733	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTAATTGTCTTAATGT	NA	False	NA	NA	False	TATAAA	-27	NA	83947463	83824935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.37	chr3	-	4817	20	NIC	ENSMUSG00000033767.15	novel	4815	34	NA	NA	-17	3612	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	19.0914115366003	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAATGACTAATATATA	8678	False	NA	NA	False	NA	NA	NA	83851067	83825059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83850846
ES.21728.38	chr3	-	4867	26	ISM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	16	19992	2	3164	5prime_fragment	FALSE	canonical	3	61	junction_10	10.2179449988733	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTTATTTTATATCCAG	NA	False	NA	NA	False	NA	NA	NA	83947466	83825507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.39	chr3	-	4360	20	NIC	ENSMUSG00000033767.15	novel	4774	34	NA	NA	-15	3160	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	25.5081324276121	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCGGCTTATTTTATAT	8680	False	NA	NA	False	NA	NA	NA	83851065	83825511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83826907_83829246_83829867_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83850846
ES.21728.4	chr3	-	5044	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	-13	524	-13	30	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTTGTTTTTTTA	NA	False	NA	4	True	AATAAA	-44	NA	83947495	83805485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.40	chr3	-	4081	25	ISM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	0	23134	0	22	5prime_fragment	FALSE	canonical	3	61	junction_9	10.4162499916663	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCACCCTATACATAGA	NA	False	NA	NA	False	NA	NA	NA	83947482	83828649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.41	chr3	-	1812	15	NNC	ENSMUSG00000033767.15	novel	4774	34	NA	NA	0	3309	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	32.1110954185557	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATTGATCAGTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	83947444	83844516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83876698_83876783_83938915_83938960_83946621_83946693_83947283
ES.21728.42	chr3	-	1019	11	ISM	ENSMUSG00000033767.15	ENSMUST00000192095.6	4774	34	0	42366	0	-56	5prime_fragment	FALSE	canonical	3	82	junction_2	6.79705818718657	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTGCAGTTTGAACCA	NA	False	NA	NA	False	NA	NA	NA	83947444	83847881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.43	chr3	-	201	1	Intergenic	novelGene_17956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATCTAATTCT	NA	False	NA	NA	False	NA	NA	NA	83906146	83905945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_83905900_83906100
ES.21728.5	chr3	-	7251	33	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	1	26	intron_retention	FALSE	canonical	1	2	junction_24	19.1549754877812	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGGTGTTTGTTTT	NA	False	NA	0	True	AATAAA	-40	NA	83947467	83805489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847871_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.6	chr3	-	4850	34	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	-6	26	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	14.3287519105165	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGGGTGTTTGTTTT	NA	False	NA	0	True	AATAAA	-40	NA	83947488	83805489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ES.21728.7	chr3	-	4639	6	ISM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	130056	-25	-575	25	3prime_fragment	FALSE	canonical	3	75	junction_3	13.1848397790796	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATCTGGGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-39	NA	83817426	83805490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653
ES.21728.9	chr3	-	6729	18	NNC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	7943	5	intron_retention	TRUE	non_canonical	0	0	junction_17	24.7446474586863	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTATTTTTGCTTTT	NA	False	NA	-21	True	AATAAA	-19	NA	83843107	83805510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83840816_83840993
ES.21729.1	chr3	+	1230	2	Intergenic	novelGene_17957	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTAGCTTCTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	83947557	83949511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_83948431_83949154
ES.2173.1	chr1	+	646	3	Antisense	novelGene_ENSMUSG00000026603.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTCCTAT	NA	False	NA	NA	False	AATAAA	-9	NA	189654139	189664792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_189654346_189655813_189655875_189664413
ES.21730.1	chr3	+	4825	1	Intergenic	novelGene_17959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCCAAAGGGCAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	84057571	84062396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_84057600_84062400
ES.21730.2	chr3	+	4125	1	Intergenic	novelGene_17958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGAAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	84057571	84061696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_84057600_84061700
ES.21731.1	chr3	+	3944	2	Genic_Genomic	ENSMUSG00000104043.2	novel	1029	1	NA	NA	-18658	3	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTGATTACAATTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	84062752	84082442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_84063077_84078822
ES.21731.2	chr3	+	4613	1	Antisense	novelGene_ENSMUSG00000033752.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAACTCTGTGTCACTA	NA	False	NA	NA	False	AATACA	-24	NA	84062773	84067386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_84062800_84067400
ES.21732.1	chr3	-	916	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	-40	-1	-40	1	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTCTCCTCTTTTTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	84063133	83995238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ES.21732.2	chr3	-	798	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTCTCCTCTTTTTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	84063090	83995238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ES.21732.3	chr3	-	7135	4	ISM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	44	39304	44	-39304	5prime_fragment	FALSE	canonical	3	209	junction_1	3.09120616516523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGGCCTTGAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	84063049	84034543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84041474_84045475_84045534_84049005_84049072_84062968
ES.21733.1	chr3	-	6999	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21504	-3611	214	713	3prime_fragment	TRUE	canonical	3	56	junction_3	11.8801889247978	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACTGTAATAATATTTA	NA	False	NA	NA	False	AATAAA	-24	NA	84098641	84067032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
ES.21733.10	chr3	-	4778	2	NNC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	22832	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTGAGTGTTTATTC	NA	False	NA	-23	True	AATAAA	-17	NA	84074998	84067749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072488_84074958
ES.21733.13	chr3	-	4902	5	NNC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	17660	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6732202499156	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGACTGAGTGTTTA	NA	False	NA	-26	True	AATAAA	-14	NA	84080170	84067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84071183_84071395_84072557_84074958_84075100_84078766_84078838_84080071
ES.21733.14	chr3	-	5483	7	NNC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	8747	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.9262983566851	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGACTGAGTGTTTA	NA	False	NA	-26	True	AATAAA	-14	NA	84089083	84067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84089057
ES.21733.17	chr3	-	6150	7	NNC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	235	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.7545514725619	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGACTGAGTGTTTA	NA	False	NA	-26	True	AATAAA	-14	NA	84098620	84067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080133_84084938_84085107_84085381_84085486_84097819
ES.21733.19	chr3	-	6391	3	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	39933	-2891	17618	-5	intron_retention	FALSE	canonical	3	69	junction_2	3	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGACTGAGTGTTTA	NA	False	NA	-26	True	AATAAA	-14	NA	84080212	84067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84072557_84074958_84075100_84078766
ES.21733.20	chr3	-	6445	12	NNC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	-14439	-677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.1116428337071	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAGCTACAAATCATG	NA	False	NA	NA	False	AATAAA	-30	NA	84192537	84068424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84192354
ES.21733.22	chr3	-	4687	12	NNC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	-255	586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.1116428337071	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	84128451	84070057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84128393
ES.21733.24	chr3	-	5115	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107691.8	7428	12	-1	2314	-1	583	multi-exon	FALSE	canonical	3	5	junction_11	27.3305447747744	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTTTTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	84167120	84070060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84166631
ES.21733.25	chr3	-	4739	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	42	-965	42	580	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAATTTTGTTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	84178056	84070063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.26	chr3	-	3335	7	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	21552	5	262	-5	3prime_fragment	FALSE	canonical	3	56	junction_3	11.8801889247978	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCTGGCTACTTCCAG	NA	False	NA	NA	False	CATAAA	-22	NA	84098593	84070648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
ES.21733.27	chr3	-	3847	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	42	-73	42	58	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTTATAACATTGAG	NA	False	NA	NA	False	NA	NA	NA	84178056	84070955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.29	chr3	-	5176	4	NIC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	238	20	intron_retention	FALSE	canonical	0	0	junction_1	40.5407887880287	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	84098617	84070993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84075100_84084938_84085107_84085381_84085486_84097819
ES.21733.30	chr3	-	8313	1	NIC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	18512	8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84079318	84071005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84071000_84079300
ES.21733.31	chr3	-	3873	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107693.9	5755	12	17	1865	1	-17	multi-exon	FALSE	canonical	2	2	junction_11	27.7929178207639	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGGGGAGGAAGAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	84128167	84071045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84127935
ES.21733.32	chr3	-	3659	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	109	48	109	-48	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84177989	84071076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.33	chr3	-	4010	12	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	5	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.1116428337071	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	84128176	84071076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84127776
ES.21733.36	chr3	-	3169	6	NIC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	407	-875	intron_retention	FALSE	canonical	3	69	junction_2	9.93176721434811	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAAGGCTGTCTTG	NA	False	NA	NA	False	TATAAA	-10	NA	84098448	84071903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84072557_84074958_84075100_84078766_84080241_84084938_84085107_84085381_84085486_84097819
ES.21733.37	chr3	-	3204	13	NNC	ENSMUSG00000027993.17	novel	7428	12	NA	NA	1	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.6390320729646	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAAGGCTGTCTTG	NA	False	NA	NA	False	TATAAA	-10	NA	84178097	84071903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84166631_84166896_84177940
ES.21733.38	chr3	-	2762	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	42	1012	42	-1012	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTTGTAGTTGCCTA	NA	False	NA	NA	False	AATGAA	-29	NA	84178056	84072040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.39	chr3	-	3119	12	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	-57	-1016	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.1116428337071	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTTGTAGTTG	NA	False	NA	NA	False	AATGAA	-25	NA	84128253	84072044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84127776
ES.21733.40	chr3	-	3004	14	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	1	-1016	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.511057512596	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTTGTAGTTG	NA	False	NA	NA	False	AATGAA	-25	NA	84128167	84072044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84124005_84124127_84125251_84125438_84128112
ES.21733.41	chr3	-	3269	13	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	-157	-1016	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.2438010177292	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAACTTGTAGTTG	NA	False	NA	NA	False	AATGAA	-25	NA	84128353	84072044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84119892_84120102_84127935
ES.21733.42	chr3	-	4300	6	NIC	ENSMUSG00000027993.17	novel	4734	11	NA	NA	93	-1226	intron_retention	FALSE	canonical	3	56	junction_2	12.983065893694	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTATCCAATTTCCGTA	NA	False	NA	NA	False	TTTAAA	-3	NA	84098762	84072254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819
ES.21733.43	chr3	-	1598	7	NNC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	-85	-3800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.1786228900426	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAAAGGTACCTTTTT	NA	False	NA	NA	False	ATTAAA	-36	NA	84098940	84074828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84075100_84078766_84078838_84080109_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84098811
ES.21733.44	chr3	-	3862	8	ISM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	1	11954	1	1575	5prime_fragment	FALSE	canonical	2	9	junction_7	28.5842828227296	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATCTGTACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	84178097	84082982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.46	chr3	-	3698	2	NIC	ENSMUSG00000027993.17	novel	664	3	NA	NA	-159	1575	intron_retention	FALSE	canonical	3	70	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATCTGTACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	84099014	84082982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84085486_84097819
ES.21733.47	chr3	-	4854	2	NNC	ENSMUSG00000027993.17	novel	664	3	NA	NA	9928	1575	intron_retention	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATCTGTACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	84087902	84082982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84086129_84086194
ES.21733.48	chr3	-	141	1	Intergenic	novelGene_17960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGTGCATGCTAAAAGT	NA	False	NA	NA	False	ATTAAA	-12	NA	84094040	84093899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84093900_84094000
ES.21733.49	chr3	-	1543	1	NIC	ENSMUSG00000027993.17	novel	7161	12	NA	NA	234	890	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGGCATTCA	NA	False	NA	NA	False	AGTAAA	-33	NA	84098621	84097078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84097100_84098600
ES.21733.50	chr3	-	4282	3	ISM	ENSMUSG00000027993.17	ENSMUST00000132283.8	829	5	8	12299	8	1960	5prime_fragment	FALSE	canonical	0	0	junction_2	14.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCCCAAAAAGTGTC	8129	False	NA	NA	False	ATTAAA	-18	NA	84212745	84111816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84115719_84117479_84117662_84212547
ES.21733.51	chr3	-	3805	1	Intergenic	novelGene_17961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGCCTAGAAGTGGTC	NA	False	NA	NA	False	NA	NA	NA	84125415	84121610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84121600_84125400
ES.21733.52	chr3	-	577	1	Intergenic	novelGene_17962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGGAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84130087	84129510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84129500_84130100
ES.21733.6	chr3	-	9463	11	NIC	ENSMUSG00000027993.17	novel	7428	12	NA	NA	37	0	intron_retention	FALSE	canonical	2	9	junction_10	26.8702437651764	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAGTGTTTATTCAAC	NA	False	NA	-20	True	AATAAA	-20	NA	84178061	84067746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ES.21733.7	chr3	-	7432	13	NNC	ENSMUSG00000027993.17	novel	7200	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.2438010177292	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGAGTGTTTATTCAA	8130	False	NA	-21	True	AATAAA	-19	NA	84212744	84067747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84209111_84209220_84212359
ES.21734.1	chr3	-	4139	12	FSM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	-48	1827	-48	10	multi-exon	FALSE	canonical	2	2	junction_2	2.63165724111457	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTCCCAGGAATGGG	NA	False	NA	NA	False	AATAAA	-30	NA	84387784	84351331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84387674
ES.21734.2	chr3	-	3591	7	NNC	ENSMUSG00000041842.16	novel	5918	12	NA	NA	-5	7	intron_retention	FALSE	non_canonical	0	0	junction_4	3.54338193757822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGCCTCCCAGGAAT	NA	False	NA	NA	False	AATAAA	-27	NA	84387741	84351334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360899_84372765_84372791_84381446_84382085_84387674
ES.21735.1	chr3	+	168	1	Intergenic	novelGene_17963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAACAGATT	NA	False	NA	NA	False	NA	NA	NA	84426365	84426533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_84426400_84426500
ES.21736.1	chr3	+	5466	2	Antisense	novelGene_ENSMUSG00000102805.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGCAACATCTGAATGAAG	NA	False	NA	NA	False	NA	NA	NA	84440870	84446591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_84442740_84442994
ES.21737.1	chr3	-	3116	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-259	-58	-168	58	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATGTACTTTTCTGAT	NA	False	NA	55	True	TATAAA	-36	NA	84490100	84403341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.10	chr3	-	2885	8	NNC	ENSMUSG00000074513.10	novel	1343	9	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.1250624657199	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTTGCCCTGTCCTT	NA	False	NA	-5	True	ATTAAA	-14	NA	84489939	84403401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84405199_84417114_84417290_84422939_84423094_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84489720
ES.21737.12	chr3	-	2161	3	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-52	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	94	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCAGTTGCCCTGTCC	NA	False	NA	-7	True	ATTAAA	-12	NA	84489984	84403403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84455240_84455343_84489720
ES.21737.13	chr3	-	2841	9	NNC	ENSMUSG00000074513.10	novel	1714	9	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	76.4868248458517	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCAGTTGCCCTGTCC	NA	False	NA	-7	True	ATTAAA	-12	NA	84489815	84403403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84447876_84447949_84455240_84455343_84489720
ES.21737.14	chr3	-	2826	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-54	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	65.3667006629182	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATCCAGTTGCCCTGTC	NA	False	NA	-8	True	ATTAAA	-11	NA	84489986	84403404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84441893_84442003_84455240_84455343_84489720
ES.21737.15	chr3	-	2927	10	NIC	ENSMUSG00000074513.10	novel	1343	9	NA	NA	-45	-157	combination_of_known_splicesites	FALSE	canonical	3	6	junction_8	80.0418100621462	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGCCTATTTTAAATCA	NA	False	NA	NA	False	AATACA	-20	NA	84489977	84403556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84447876_84447930_84455240_84455343_84489720
ES.21737.16	chr3	-	2648	9	NIC	ENSMUSG00000074513.10	novel	1714	9	NA	NA	-6	-161	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	75.1713667229751	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATGAGCCTATTTTAA	NA	False	NA	NA	False	AATACA	-16	NA	84489798	84403560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84447876_84447930_84455240_84455343_84489720
ES.21737.17	chr3	-	2868	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-230	161	-139	-161	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATGAGCCTATTTTAA	NA	False	NA	NA	False	AATACA	-16	NA	84490071	84403560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.18	chr3	-	2409	7	ISM	ENSMUSG00000074513.10	ENSMUST00000107687.9	1714	9	47871	-950	47871	-161	3prime_fragment	FALSE	canonical	0	0	junction_5	74.1365107232747	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATGAGCCTATTTTAA	8849	False	NA	NA	False	AATACA	-16	NA	84441921	84403560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436497_84436573_84441893
ES.21737.19	chr3	-	3003	9	NNC	ENSMUSG00000074513.10	novel	1714	9	NA	NA	101	-161	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	83.5403158660536	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATGAGCCTATTTTAA	NA	False	NA	NA	False	AATACA	-16	NA	84489691	84403560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84447876_84447930_84455240_84455343_84489258
ES.21737.2	chr3	-	2944	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-208	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.4069942768748	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCCTGTCCTTATAAAC	NA	False	NA	1	True	ATTAAA	-20	NA	84490140	84403395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.21	chr3	-	2661	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-129	267	-38	-267	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTAGACTGTATGAT	NA	False	NA	57	True	AATGAA	-26	NA	84489970	84403666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.22	chr3	-	2011	4	NNC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	63631	-331	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	82.3825763671475	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTTCACCTGTTATT	NA	False	NA	-7	True	TATAAA	-16	NA	84426161	84403730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84405199_84417114_84417290_84422939_84423098_84425951
ES.21737.23	chr3	-	2178	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	40	581	-9	530	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTTTCTCTTGATT	NA	False	NA	NA	False	CATAAA	-42	NA	84489801	84403980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.24	chr3	-	4209	5	ISM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	-130	19977	-39	-18334	5prime_fragment	FALSE	canonical	3	164	junction_3	9.60143218483576	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAATATTCTGTATG	NA	False	NA	NA	False	AATAGA	-13	NA	84489971	84423376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ES.21737.3	chr3	-	3138	9	FSM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	-148	-1647	-148	4	multi-exon	FALSE	canonical	3	20	junction_5	63.3733974156349	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCCTGTCCTTATAAAC	NA	False	NA	1	True	ATTAAA	-20	NA	84490080	84403395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489720
ES.21737.4	chr3	-	2843	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	65.9646369908403	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489994	84403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84455240_84455343_84489720
ES.21737.5	chr3	-	5153	1	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	81240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84408552	84403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84403400_84408600
ES.21737.6	chr3	-	3079	9	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-136	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	75.1713667229751	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84490068	84403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84447876_84447930_84455240_84455343_84489720
ES.21737.7	chr3	-	2922	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	-136	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	62.7986199423735	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTTGCCCTGTCCTT	NA	False	NA	-5	True	ATTAAA	-14	NA	84490068	84403401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84489720
ES.21737.8	chr3	-	3055	9	NNC	ENSMUSG00000074513.10	novel	1714	9	NA	NA	88	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	75.4598403125795	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTTGCCCTGTCCTT	NA	False	NA	-5	True	ATTAAA	-14	NA	84489704	84403401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489258_84489439_84489505
ES.21737.9	chr3	-	5365	5	ISM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	51836	2	51787	-2	3prime_fragment	FALSE	canonical	3	171	junction_1	3.93700393700591	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCAGTTGCCCTGTCCTT	NA	False	NA	-5	True	ATTAAA	-14	NA	84438005	84403401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992
ES.21738.1	chr3	-	178	1	Intergenic	novelGene_17964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84496771	84496593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84496600_84496800
ES.21739.1	chr3	-	214	1	Intergenic	novelGene_17965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84540731	84540517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84540500_84540700
ES.2174.1	chr1	-	4100	11	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-49	0	intron_retention	FALSE	non_canonical	0	0	junction_3	102.172599066482	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654499	189612688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189616195_189617495_189617617_189618717_189618829_189621011_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.10	chr1	-	1511	11	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	135.894665090282	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654458	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.11	chr1	-	1764	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.723099888293	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654492	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613215_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.12	chr1	-	1817	13	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.185911163284	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654567	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189613691_189613821_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.13	chr1	-	1488	11	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	134.446271796581	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654481	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617498_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189642047_189642112_189654303
ES.2174.14	chr1	-	5581	9	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	299	junction_4	21.569654610123	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654456	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189613064_189614305_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.17	chr1	-	2845	11	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-9	0	intron_retention	FALSE	canonical	2	5	junction_3	101.402416144784	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654459	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618749_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.19	chr1	-	3571	6	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-7678	0	intron_retention	FALSE	canonical	3	299	junction_5	25.5107820342694	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189628877	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189613064_189614305_189614415_189616020_189618829_189621011_189621115_189623596_189623665_189628767
ES.2174.2	chr1	-	3003	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654583	189612688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.20	chr1	-	3169	5	NNC	ENSMUSG00000026603.14	novel	1077	6	NA	NA	-805	-2	intron_retention	FALSE	canonical	0	0	junction_4	155.742375415299	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTTGGTTTCTGAAT	NA	False	NA	-10	True	AATAAA	-13	NA	189622004	189612692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618818_189621011
ES.2174.21	chr1	-	3176	13	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	157.75303747736	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTTGGTTTCTGAAT	NA	False	NA	-10	True	AATAAA	-13	NA	189654456	189612692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189614591_189614728_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189630549_189632126_189642047_189642112_189654303
ES.2174.23	chr1	-	3910	1	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	2646	-1805	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGACGAGTCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	189618553	189614643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189614600_189618600
ES.2174.24	chr1	-	989	8	NIC	ENSMUSG00000026603.14	novel	1708	10	NA	NA	-38	-145	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	114.842394220097	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTCCTGTGTGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	189654488	189617387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_189617617_189618717_189618829_189621011_189621115_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.25	chr1	-	1304	9	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	-175	4699	-175	-145	5prime_fragment	FALSE	canonical	3	299	junction_4	18.6543393075177	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTCCTGTGTGCT	NA	False	NA	NA	False	AGTAAA	-12	NA	189654735	189617387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.26	chr1	-	1035	9	NNC	ENSMUSG00000026603.14	novel	1708	10	NA	NA	-49	-146	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	107.376382412521	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGTCTCCTGTGTGC	NA	False	NA	NA	False	AGTAAA	-11	NA	189654499	189617388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189617617_189618749_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.5	chr1	-	1821	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.8538448651751	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654700	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.8	chr1	-	4614	10	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_3	108.279245757109	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654583	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189621115_189623596_189623665_189628767_189629681_189632014_189632126_189642047_189642112_189654303
ES.2174.9	chr1	-	1726	13	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.47829394488	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189654567	189612690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189613064_189613691_189613730_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ES.21740.1	chr3	+	1746	8	NNC	ENSMUSG00000056498.14	novel	457	2	NA	NA	-20580	-1558	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.451753951452626	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTTCGTTCTCTAATT	NA	False	NA	NA	False	AATAAA	-12	NA	84552918	84610324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84553013_84554730_84554823_84591515_84591771_84591858_84591898_84596882_84596911_84597850_84597937_84599801_84599860_84609230
ES.21741.1	chr3	-	6551	1	Intergenic	novelGene_17966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGGTTTCACA	NA	False	NA	NA	False	AATAAA	-16	NA	84721735	84715184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84715200_84721700
ES.21741.2	chr3	-	4612	1	Intergenic	novelGene_17967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTTGTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84721708	84717096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84717100_84721700
ES.21741.3	chr3	-	2294	1	Intergenic	novelGene_17968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCTTGTTTGAGAAACT	NA	False	NA	NA	False	AAAAAG	-4	NA	84721714	84719420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84719400_84721700
ES.21742.1	chr3	+	1703	3	ISM	ENSMUSG00000028086.16	ENSMUST00000151410.2	4348	13	-1019	113202	-809	-39024	5prime_fragment	FALSE	canonical	3	34	junction_2	7.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGAATTTGGTAAGTT	NA	False	NA	NA	False	ATTAAA	-29	NA	84721765	84771787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_84723077_84771270_84771319_84771443
ES.21742.10	chr3	+	3559	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-664	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTACTCAGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	84721910	84884991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.11	chr3	+	4530	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-664	607	-664	-606	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTATTTTCTTTTATC	NA	False	NA	NA	False	AATAAA	-42	NA	84721910	84885898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.12	chr3	+	3521	15	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-656	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	28.3225769898669	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGTACTCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84721918	84884990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811046_84811138_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.14	chr3	+	4445	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-640	-603	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTTCTTTTATCTGG	NA	False	NA	NA	False	AATAAA	-45	NA	84721934	84885901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.15	chr3	+	3597	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-640	1516	-640	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTTGTACTCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	84721934	84884989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.16	chr3	+	5269	15	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-639	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	31.645759299354	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	24	True	AATAAA	-18	NA	84721935	84886504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84723077_84771270_84771319_84771443_84771508_84797401_84797560_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.17	chr3	+	4645	15	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-639	-620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2130186637107	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGTGTGTGCAAAGCT	NA	False	NA	NA	False	AATAAA	-28	NA	84721935	84885884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84771443_84771508_84786684_84786839_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.19	chr3	+	4264	1	Intergenic	novelGene_17969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAAATTGG	NA	False	NA	NA	False	NA	NA	NA	84730081	84734345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_84730100_84734300
ES.21742.2	chr3	+	5114	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-705	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721869	84886505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.20	chr3	+	3649	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	124	-1552	124	0	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	753	False	NA	24	True	AATAAA	-18	NA	84859576	84886504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.21	chr3	+	2950	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	195	-924	195	-628	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAATTGAGAGTGTGT	824	False	NA	NA	False	AATAAA	-20	NA	84859647	84885876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.22	chr3	+	3193	9	ISM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	6356	-1547	6356	-5	3prime_fragment	FALSE	canonical	3	58	junction_8	14.330365487314	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATTGCGCCTGTTTCT	6985	False	NA	19	True	AATAAA	-13	NA	84865808	84886499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.23	chr3	+	4872	1	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	22180	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	24	True	AATAAA	-18	NA	84881632	84886504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84881600_84886500
ES.21742.24	chr3	+	3867	2	NIC	ENSMUSG00000028086.16	novel	4073	13	NA	NA	22298	0	intron_retention	FALSE	canonical	3	58	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84881750	84886505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84883692_84884579
ES.21742.3	chr3	+	5049	12	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-689	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.1137792421748	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGCCTGTTTCTTCCAC	NA	False	NA	24	True	AATAAA	-18	NA	84721885	84886504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_84723077_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.4	chr3	+	4993	14	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-676	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.888072106999	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCGCCTGTTTCTTCCA	NA	False	NA	23	True	AATAAA	-17	NA	84721898	84886503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84810807_84811046_84811135_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.5	chr3	+	4431	15	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-675	-623	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	28.3225769898669	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAGAGTGTGTGCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	84721899	84885881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811046_84811138_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.7	chr3	+	5144	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	-671	0	-671	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721903	84886505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.8	chr3	+	5050	15	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-670	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	28.3225769898669	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721904	84886505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811046_84811138_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ES.21742.9	chr3	+	3926	14	NNC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-668	17685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	34.1876132452718	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGCTGCTTCACAAGG	NA	False	NA	NA	False	AATAAA	-31	NA	84721906	84904190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84896087_84896149_84903476
ES.21743.1	chr3	-	7089	1	Intergenic	novelGene_17970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCAAAAACCAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	84744163	84737074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84737100_84744200
ES.21744.1	chr3	-	176	1	Intergenic	novelGene_17971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84769582	84769406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84769400_84769600
ES.21745.1	chr3	-	178	1	Intergenic	novelGene_17972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	84823900	84823722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_84823700_84823900
ES.21746.1	chr3	+	170	1	Intergenic	novelGene_17973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	85404931	85405101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85404900_85405100
ES.21747.1	chr3	-	3073	2	FSM	ENSMUSG00000085527.2	ENSMUST00000128872.2	375	2	-55	-2643	36	509	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTGTCCTCTGTGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	85481216	85462843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_85465826_85481125
ES.21748.1	chr3	+	2048	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	-36	1457	-36	7	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGGTGCTTTGTAG	NA	False	NA	16	True	AATAAA	-20	NA	85481389	85561472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ES.21748.10	chr3	+	2502	14	NNC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	7	293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	62.0754456024728	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTAACTTCCACGTA	NA	False	NA	NA	False	AATAAA	-21	NA	85481445	85561758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85481627_85483170_85483322_85497190_85497415_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ES.21748.11	chr3	+	1870	13	NNC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	1675	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	62.7333421891598	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCGTGGGTGCTTTGT	NA	False	NA	14	True	AATAAA	-18	NA	85483176	85561470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85551270_85551338_85552276_85552356_85559587_85559723_85561030
ES.21748.2	chr3	+	2313	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	-14	1170	-14	294	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAACTTCCACGTAA	NA	False	NA	NA	False	AATAAA	-22	NA	85481411	85561759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ES.21748.3	chr3	+	2167	14	NNC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.7707410196605	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCGTGGGTGCTTTGT	NA	False	NA	14	True	AATAAA	-18	NA	85481420	85561470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85560452_85560605_85561030
ES.21748.4	chr3	+	1788	13	NNC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	2	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.0522046763839	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCTGTCATTGTGAGA	NA	False	NA	NA	False	GATAAA	-14	NA	85481427	85561141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85560921
ES.21748.5	chr3	+	2807	12	FSM	ENSMUSG00000028085.13	ENSMUST00000107674.2	1980	12	1	-828	1	-497	multi-exon	FALSE	canonical	3	140	junction_6	12.872547507733	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGAGGATTCTTGGT	NA	False	NA	NA	False	AAGAAA	-29	NA	85481434	85560968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587
ES.21748.7	chr3	+	2435	12	NIC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	2	5	intron_retention	FALSE	canonical	3	140	junction_5	19.8327719438107	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCGTGGGTGCTTTGT	NA	False	NA	14	True	AATAAA	-18	NA	85481435	85561470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ES.21748.8	chr3	+	4075	12	FSM	ENSMUSG00000028085.13	ENSMUST00000107672.8	1820	12	11	-2266	-2	2266	multi-exon	FALSE	canonical	0	0	junction_11	47.5594451864851	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTTGTATGCATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	85481436	85556152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85553501
ES.21748.9	chr3	+	1786	11	NIC	ENSMUSG00000028085.13	novel	3469	13	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	53.8004646820081	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCGTGGGTGCTTTGT	NA	False	NA	14	True	AATAAA	-18	NA	85481436	85561470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85559587_85559723_85561030
ES.21749.1	chr3	-	405	1	Intergenic	novelGene_17974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACTATAAGGTG	NA	False	NA	NA	False	NA	NA	NA	85503139	85502734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_85502700_85503100
ES.21749.2	chr3	-	178	1	Intergenic	novelGene_17975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTGTCTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	85503138	85502960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_85503000_85503100
ES.2175.1	chr1	-	3314	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAACAAACCTG	NA	False	NA	NA	False	NA	NA	NA	189658632	189655318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_189655300_189658600
ES.21750.1	chr3	+	177	1	Intergenic	novelGene_17976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGATCTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	85767590	85767767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85767600_85767800
ES.21751.1	chr3	-	4841	14	Fusion	ENSMUSG00000051000.18_ENSMUSG00000102805.6	novel	4445	12	NA	NA	40	-1	multi-exon	FALSE	canonical	0	0	junction_6	0.835598499323093	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGAGAAACTCTGGTT	NA	False	NA	NA	False	GATAAA	-15	NA	85794783	85567372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_85568526_85572659_85572799_85573094_85573274_85579529_85580787_85583377_85583569_85590886_85590967_85595737_85595906_85627722_85627810_85629698_85629858_85637565_85638193_85648457_85648682_85692524_85692632_85724478_85724599_85794433
ES.21751.2	chr3	-	4083	15	Fusion	ENSMUSG00000051000.18_ENSMUSG00000102805.6	novel	4445	12	NA	NA	44	-816	multi-exon	FALSE	canonical	0	0	junction_6	0.914732033918978	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTCTACTTTGATAT	NA	False	NA	NA	False	NA	NA	NA	85794779	85568187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_85568526_85572659_85572799_85573094_85573274_85579529_85580787_85583377_85583569_85590886_85590967_85595737_85595906_85627722_85627810_85629698_85629858_85637565_85638193_85648457_85648682_85655759_85655821_85692524_85692632_85724478_85724599_85794433
ES.21752.1	chr3	+	484	1	FSM	ENSMUSG00000044330.9	ENSMUST00000054148.9	288	1	-75	-121	-75	121	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAGCTAATCACCAACA	NA	False	NA	NA	False	AATAAA	-45	NA	85823014	85823498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85823000_85823500
ES.21753.1	chr3	+	117	1	Intergenic	novelGene_17977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	85844719	85844836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85844700_85844800
ES.21754.1	chr3	+	5373	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-205	2049	-205	-633	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85878210	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.10	chr3	+	4204	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-25	3038	-25	524	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTTTGACAATTACT	NA	False	NA	19	True	TATAAA	-22	NA	85878390	86034795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.13	chr3	+	3874	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-14	3357	-14	205	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTCTAACAGCTTGA	NA	False	NA	NA	False	NA	NA	NA	85878401	86034476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.14	chr3	+	4807	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-13	-633	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	34.9806554899047	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85878402	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
ES.21754.15	chr3	+	4578	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-11	2650	-11	912	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGGGCCAGTGGGTTA	NA	False	NA	NA	False	ACTAAA	-21	NA	85878404	86035183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.16	chr3	+	4809	21	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-8	-1018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.8361235745565	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGATTGCACTTGATT	NA	False	NA	NA	False	ACTAAA	-14	NA	85878407	86035399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020394_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.17	chr3	+	4792	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-7	2432	-7	-1016	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATTGCACTTGATTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	85878408	86035401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.18	chr3	+	2389	9	ISM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-6	31828	-6	-28266	5prime_fragment	FALSE	canonical	3	123	junction_1	16.7854103315945	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAATACTTTCCGATG	NA	False	NA	NA	False	AAGAAA	-36	NA	85878409	86006005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453
ES.21754.19	chr3	+	7222	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-5	0	-5	0	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-22	NA	85878410	86037833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.2	chr3	+	1508	1	Genic_Genomic	ENSMUSG00000028082.15	novel	NA	NA	NA	NA	-193	-154541	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTAAGCGTATTCCGAG	NA	False	NA	NA	False	NA	NA	NA	85878222	85879730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_85878200_85879700
ES.21754.20	chr3	+	4312	7	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-5	-31403	intron_retention	FALSE	canonical	3	123	junction_1	12.5222025041746	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAGAAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	85878410	86002868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85992665_86000996
ES.21754.21	chr3	+	3765	21	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-5	520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.0942824044605	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATCATTCCTTTGACAAT	NA	False	NA	15	True	TATAAA	-18	NA	85878410	86034791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
ES.21754.22	chr3	+	5152	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-4	-114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	35.9508987395504	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTTGGGCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85878411	86036303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86035505_86036043
ES.21754.23	chr3	+	5236	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-4	-633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.3838477220172	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85878411	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85888928_85888993_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.24	chr3	+	4887	23	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-4	-640	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	53.4287197972547	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCATCTCAGACTACAC	NA	False	NA	5	True	AATAAA	-19	NA	85878411	86035777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86026672_86026769_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
ES.21754.25	chr3	+	3519	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-4	3702	-4	-140	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTACACTAGAATTTCTG	NA	False	NA	NA	False	NA	NA	NA	85878411	86034131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.27	chr3	+	3835	17	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-4	-644	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.979242661036	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATTCCTCATCTCAGACT	NA	False	NA	1	True	AATAAA	-15	NA	85878411	86035773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.28	chr3	+	5403	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	1	-636	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5249069440999	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	9	True	AATAAA	-23	NA	85878416	86035781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85918912_85919152_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.29	chr3	+	5260	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	4	-633	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	46.6053533074914	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85878419	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86026672_86026769_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.3	chr3	+	5837	26	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-181	59003	intron_retention	FALSE	non_canonical	0	0	junction_1	75.4101743798541	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTGGGGTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	85878234	86096836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_85993032_85993189_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86031091_86033901_86034021_86034394_86035785_86047077_86047152_86054018_86054076_86082216_86082352_86089891_86089987_86096804
ES.21754.30	chr3	+	5117	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	10	-634	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.3684951815425	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878425	86035783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.31	chr3	+	5241	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	13	-634	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	46.8189449415744	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878428	86035783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85878965_85879053_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.33	chr3	+	4776	17	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	14	-634	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.3120155009645	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878429	86035783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.34	chr3	+	2228	1	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	14	-153614	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGACTTGAAACAGCCAA	NA	False	NA	NA	False	GGGGCT	-1	NA	85878429	85880657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878400_85880700
ES.21754.36	chr3	+	929	7	ISM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	15	45948	15	-42386	5prime_fragment	FALSE	canonical	3	123	junction_1	16.5369955621395	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCAGAAAAGCCCAGTGA	NA	False	NA	NA	False	AGTAAA	-9	NA	85878430	85991885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674
ES.21754.37	chr3	+	5123	21	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	16	-654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.8267565772496	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCTTTTCGATTCCTC	NA	False	NA	-9	True	AATAAA	-5	NA	85878431	86035763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990541_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.38	chr3	+	5482	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	17	-233	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	37.7597009237416	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGGGTTATTGTGTT	NA	False	NA	NA	False	GATAAA	-1	NA	85878432	86036184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.39	chr3	+	3632	8	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	17	-31358	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	51.3081924476481	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	85878432	86002913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990972_85991674_85992665_86000996
ES.21754.4	chr3	+	5867	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	-174	1524	-174	-108	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTGTTTTCAATCC	NA	False	NA	NA	False	NA	NA	NA	85878241	86036309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.40	chr3	+	2835	17	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	18	524	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.979242661036	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTTTGACAATTACT	NA	False	NA	19	True	TATAAA	-22	NA	85878433	86034795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.41	chr3	+	5771	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	18	-108	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	46.6053533074914	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTGTTTTCAATCC	NA	False	NA	NA	False	NA	NA	NA	85878433	86036309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86026672_86026769_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.42	chr3	+	5301	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	18	-108	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	34.9806554899047	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTGTTTTCAATCC	NA	False	NA	NA	False	NA	NA	NA	85878433	86036309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
ES.21754.43	chr3	+	3398	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	25	-192	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.3684951815425	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGCACTATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85878440	86034079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.44	chr3	+	2325	10	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	33	-28331	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	60.6613754306297	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAATTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	85878448	86005940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453
ES.21754.46	chr3	+	5293	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	48	-633	intron_retention	FALSE	canonical	3	123	junction_1	14.9877142669377	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85878463	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.49	chr3	+	5338	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	236	1643	236	-227	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATTGTGTTTGTTTC	NA	False	NA	NA	False	GATAAA	-7	NA	85878651	86036190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.5	chr3	+	5694	20	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-47	-114	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.3684951815425	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTTGGGCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85878368	86036303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.50	chr3	+	762	1	Intergenic	novelGene_17979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAGTAAGTTTAAAGC	5390	False	NA	NA	False	NA	NA	NA	85893208	85893970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85893200_85894000
ES.21754.51	chr3	+	177	1	Intergenic	novelGene_17980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	85903211	85903388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85903200_85903400
ES.21754.52	chr3	+	5091	21	NNC	ENSMUSG00000028082.15	novel	7044	21	NA	NA	-27280	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.4292464923446	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTCATCTCAGACTAC	3184	False	NA	3	True	AATAAA	-17	NA	85918903	86035775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85919152_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.53	chr3	+	207	1	Intergenic	novelGene_17981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTGCTTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	85937227	85937434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85937200_85937400
ES.21754.54	chr3	+	164	1	Intergenic	novelGene_17983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	85950752	85950916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85950800_85950900
ES.21754.55	chr3	+	159	1	Intergenic	novelGene_17984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	2454	False	NA	NA	False	NA	NA	NA	85973682	85973841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_85973700_85973800
ES.21754.56	chr3	+	5248	17	ISM	ENSMUSG00000028082.15	ENSMUST00000182666.8	6886	20	12310	1531	-1209	-115	3prime_fragment	FALSE	canonical	3	130	junction_4	14.211433557175	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAATTTGGGCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	85990531	86036302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.57	chr3	+	4091	15	NNC	ENSMUSG00000028082.15	novel	6414	15	NA	NA	240	-633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.6660621236933	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTACACTGCATTG	NA	False	NA	12	True	AATAAA	-26	NA	85992036	86035784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020394_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.58	chr3	+	3196	14	NNC	ENSMUSG00000028082.15	novel	6414	15	NA	NA	13740	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.7407640293333	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTCATCTCAGACTAC	6667	False	NA	3	True	AATAAA	-17	NA	86005536	86035775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034894_86034942
ES.21754.59	chr3	+	3385	11	ISM	ENSMUSG00000028082.15	ENSMUST00000107664.3	6414	15	19423	2048	19367	-636	3prime_fragment	FALSE	canonical	3	140	junction_2	12.0929731662648	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	9	True	AATAAA	-23	NA	86011163	86035781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.6	chr3	+	5248	22	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-41	-634	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	45.6890307223153	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGACTACACTGCATT	NA	False	NA	11	True	AATAAA	-25	NA	85878374	86035783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.60	chr3	+	293	1	Intergenic	novelGene_17985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAATG	3439	False	NA	NA	False	NA	NA	NA	86020677	86020970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86020700_86021000
ES.21754.61	chr3	+	179	1	Intergenic	novelGene_17986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7337	False	NA	NA	False	NA	NA	NA	86024575	86024754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86024600_86024800
ES.21754.62	chr3	+	390	2	Intergenic	novelGene_17987	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACTCACACACAGAAA	7340	False	NA	NA	False	NA	NA	NA	86024578	86025676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86024887_86025594
ES.21754.63	chr3	+	4609	1	Antisense	novelGene_ENSMUSG00000028081.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAAAACAATCTTAGTA	562	False	NA	NA	False	TTTAAA	-3	NA	86041377	86045986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_86041400_86046000
ES.21754.64	chr3	+	1558	4	NNC	ENSMUSG00000103408.2	novel	981	2	NA	NA	23	5876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTTGTTTCCCTTCTT	9271	False	NA	NA	False	AATAAA	-19	NA	86050086	86058728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86050513_86052320_86052409_86054709_86054756_86057730
ES.21754.8	chr3	+	5289	23	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	-26	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.1465840280887	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTCATCTCAGACTAC	NA	False	NA	3	True	AATAAA	-17	NA	85878389	86035775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878732_85888928_85888993_85948132_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21754.9	chr3	+	5055	22	NNC	ENSMUSG00000028082.15	novel	7044	21	NA	NA	-25	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.5740878600791	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTCATCTCAGACTAC	NA	False	NA	3	True	AATAAA	-17	NA	85878390	86035775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_85878558_85948127_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ES.21755.1	chr3	+	145	1	Intergenic	novelGene_17990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAAAAAAAAAAT	4619	False	NA	NA	False	NA	NA	NA	86108827	86108972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86108800_86109000
ES.21756.1	chr3	+	134	1	Intergenic	novelGene_17991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86119116	86119250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86119100_86119200
ES.21757.1	chr3	+	6513	34	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-471	24404	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.67888813339272	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATTGCTAATTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	86131515	86283705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211
ES.21757.10	chr3	+	10348	57	NNC	ENSMUSG00000028080.17	novel	9888	57	NA	NA	-451	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	9.17036876386692	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAGTGGAAACTGA	NA	False	NA	7	True	AATAAA	-15	NA	86131535	86689992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211905_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648696_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683307_86683502_86687418_86687571_86688877
ES.21757.11	chr3	+	6670	35	ISM	ENSMUSG00000028080.17	ENSMUST00000192145.6	8843	51	-450	351153	-450	43565	5prime_fragment	FALSE	canonical	3	6	junction_1	6.73760556278884	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTTGTTTATAGAAC	NA	False	NA	NA	False	AATAAA	-36	NA	86131536	86302866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527
ES.21757.12	chr3	+	8911	34	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-450	26823	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.67888813339272	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTCTATAAAGTG	NA	False	NA	NA	False	AATAAA	-30	NA	86131536	86286124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211
ES.21757.14	chr3	+	6313	34	ISM	ENSMUSG00000028080.17	ENSMUST00000192145.6	8843	51	0	370314	0	24404	5prime_fragment	FALSE	canonical	3	6	junction_1	6.83251019701299	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATTGCTAATTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	86131986	86283705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211
ES.21757.15	chr3	+	9992	57	NNC	ENSMUSG00000028080.17	novel	9888	57	NA	NA	226	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.64720470776221	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAGTGGAAACTGACA	NA	False	NA	9	True	AATAAA	-17	NA	86132212	86689994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86209068_86209092_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261507_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683307_86683502_86687418_86687571_86688877
ES.21757.16	chr3	+	177	1	Intergenic	novelGene_17994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	86162394	86162571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86162400_86162600
ES.21757.18	chr3	+	5050	30	ISM	ENSMUSG00000028080.17	ENSMUST00000192145.6	8843	51	93418	126899	-32559	-2607	internal_fragment	FALSE	canonical	3	18	junction_7	5.33424982216613	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGGTGTACTCCTTTTT	713	False	NA	NA	False	AATAAA	-18	NA	86225404	86527120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816
ES.21757.19	chr3	+	268	1	Intergenic	novelGene_17996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATCTGATGCCCACT	4717	False	NA	NA	False	NA	NA	NA	86229408	86229676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86229400_86229700
ES.21757.2	chr3	+	10358	57	FSM	ENSMUSG00000028080.17	ENSMUST00000107635.7	9888	57	-458	-12	-458	9	multi-exon	FALSE	canonical	3	6	junction_1	7.26467550576635	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACATTGTCTTTGCTTCC	NA	False	NA	23	True	AATAAA	-31	NA	86131528	86690008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.21	chr3	+	5034	29	NNC	ENSMUSG00000028080.17	novel	9888	57	NA	NA	5930	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	10.6346444823184	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACATTGTCTTTGCTTCC	438	False	NA	23	True	AATAAA	-31	NA	86263893	86690008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447215_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680405_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.22	chr3	+	174	1	Intergenic	novelGene_17997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGAAAACATCCCACA	7580	False	NA	NA	False	NA	NA	NA	86271035	86271209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86271000_86271200
ES.21757.23	chr3	+	5955	1	Intergenic	novelGene_17998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTACATACTGGGT	NA	False	NA	NA	False	ATTAAA	-30	NA	86283854	86289809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86283900_86289800
ES.21757.24	chr3	+	6371	1	FSM	ENSMUSG00000064867.3	ENSMUST00000082933.3	107	1	-4451	-1813	-4451	1813	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGTTAAATGCACTGAG	NA	False	NA	NA	False	ATTAAA	-24	NA	86287102	86293473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86287100_86293500
ES.21757.25	chr3	+	4023	23	NNC	ENSMUSG00000028080.17	novel	9888	57	NA	NA	44562	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	10.9394464029633	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGAAACTGACATTGTC	NA	False	NA	14	True	AATAAA	-22	NA	86302525	86689999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648696_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680505_86683304_86683502_86687418_86687571_86688877
ES.21757.26	chr3	+	787	1	Intergenic	novelGene_17999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAAAAAAATTCAAATTA	NA	False	NA	NA	False	NA	NA	NA	86486502	86487289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86486500_86487300
ES.21757.27	chr3	+	2465	11	NNC	ENSMUSG00000028080.17	novel	8843	51	NA	NA	129594	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	13.5355088563378	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGAAACTGACATTGTC	NA	False	NA	14	True	AATAAA	-22	NA	86585116	86689999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86585186_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.28	chr3	+	4249	1	Intergenic	novelGene_18002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGGGAGGGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	86659284	86663533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86659300_86663500
ES.21757.3	chr3	+	10072	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-455	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	6.58846297612388	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGGAAACTGACATT	NA	False	NA	11	True	AATAAA	-19	NA	86131531	86689996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.4	chr3	+	10372	57	NNC	ENSMUSG00000028080.17	novel	9888	57	NA	NA	-454	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	8.23535728999523	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGAGTGGAAACTGAC	NA	False	NA	8	True	AATAAA	-16	NA	86131532	86689993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258476_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.5	chr3	+	4973	24	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-453	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	5.92198811964571	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGCTGTTTGCCTTCT	NA	False	NA	NA	False	AGTAAA	-21	NA	86131533	86258233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553
ES.21757.6	chr3	+	10070	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-453	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9.56474646815063	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGGAAACTGACATT	NA	False	NA	11	True	AATAAA	-19	NA	86131533	86689996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132816_86192310_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513291_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648696_86648890_86653107_86653163_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21757.7	chr3	+	5456	4	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-452	-61829	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_2	0.471404520791032	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTGTTATTAAGCTTA	NA	False	NA	NA	False	AATATA	-17	NA	86131534	86197472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940
ES.21757.8	chr3	+	10500	53	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-452	1360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.347903928532	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCCCCCCCAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	86131534	86655379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86209068_86209092_86210031_86210125_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107
ES.21757.9	chr3	+	10085	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-451	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_49	7.18620773653622	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGAAACTGACATTGT	NA	False	NA	13	True	AATAAA	-21	NA	86131535	86689998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648696_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ES.21758.1	chr3	-	211	1	Intergenic	novelGene_17978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACCCTCCAACAATCA	3257	False	NA	NA	False	NA	NA	NA	85884228	85884017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_85884000_85884200
ES.21759.1	chr3	-	1140	4	NIC	ENSMUSG00000049013.4	novel	949	6	NA	NA	-40	359	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCCTCAGGGGCTTAC	NA	False	NA	NA	False	NA	NA	NA	85909838	85900757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_85901388_85904518_85904686_85905360_85905621_85909755
ES.21759.2	chr3	-	818	5	ISM	ENSMUSG00000049013.4	ENSMUST00000061343.4	949	6	-39	3301	-39	-3301	5prime_fragment	TRUE	canonical	2	4	junction_1	0.82915619758885	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATAGTTCTGACAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	85909837	85904417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_85904686_85905360_85905621_85907688_85907852_85908192_85908238_85909755
ES.2176.1	chr1	-	146	1	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	189762215	189762069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_189762100_189762200
ES.21760.1	chr3	-	162	1	Intergenic	novelGene_17982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	85947607	85947445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_85947400_85947600
ES.21761.1	chr3	-	1019	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	-41	-1	-41	1	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTCCATTGATTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	86050050	86045245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ES.21761.11	chr3	-	804	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	252	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	3504.02229444962	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	86049757	86045252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049729
ES.21761.12	chr3	-	4649	1	FSM	ENSMUSG00000064390.3	ENSMUST00000082456.3	71	1	-1906	-2672	-1906	2672	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	86049901	86045252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86045300_86049900
ES.21761.13	chr3	-	579	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	108	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3914.76974546397	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTTTGCTTCTGTCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	86049901	86045253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046405_86048677_86048734_86049004_86049109_86049814
ES.21761.14	chr3	-	1271	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	318	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	3506.97490153551	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCGTTTGCTTCTGTCCA	NA	False	NA	NA	False	AATAAA	-13	NA	86049691	86045254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049194
ES.21761.15	chr3	-	833	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	108	-8	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_5	3476.85020672447	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCGTTTGCTTCTGTCCA	NA	False	NA	NA	False	AATAAA	-13	NA	86049901	86045254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049842
ES.21761.16	chr3	-	2604	1	FSM	ENSMUSG00000064390.3	ENSMUST00000082456.3	71	1	-1956	-577	-1956	577	mono-exon	FALSE	NA	NA	NA	NA	NA	761	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGGGTCTCCAA	NA	False	NA	NA	False	NA	NA	NA	86049951	86047347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86047300_86050000
ES.21761.2	chr3	-	1096	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	305	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3507.30304365049	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86049704	86045246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049390
ES.21761.3	chr3	-	2009	4	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	116	-5	intron_retention	FALSE	canonical	3	6820	junction_1	1093.72706325156	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049893	86045251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86045418_86045789_86046556_86048545_86048734_86049004
ES.21761.4	chr3	-	4378	2	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	109	-5	intron_retention	FALSE	canonical	3	9155	junction_1	0	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049900	86045251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86048734_86049004
ES.21761.5	chr3	-	4019	3	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	21	-5	intron_retention	FALSE	canonical	3	3673	junction_1	2741	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGCTTCTGTCCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	86049988	86045251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86045900_86046346_86048734_86049004
ES.21761.6	chr3	-	3586	4	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	81	-6	intron_retention	FALSE	canonical	3	3673	junction_2	2246.18585359469	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	86049928	86045252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86045418_86045789_86045900_86046346_86048734_86049004
ES.21761.7	chr3	-	2853	5	NIC	ENSMUSG00000028081.7	novel	977	6	NA	NA	108	-6	intron_retention	FALSE	canonical	3	3673	junction_2	2727.92324855374	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	86049901	86045252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86045418_86045789_86045900_86046346_86048734_86049004_86049109_86049814
ES.21761.8	chr3	-	1114	6	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	305	-6	at_least_one_novel_splicesite	FALSE	canonical	2	108	junction_5	3471.9507715404	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	False	NA	NA	False	AATAAA	-15	NA	86049704	86045252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049366
ES.21762.1	chr3	-	1656	3	Antisense	novelGene_ENSMUSG00000089394.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTCGGTCTGTCGTGA	NA	False	NA	NA	False	NA	NA	NA	86132550	86055707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_86056950_86130052_86130261_86132344
ES.21762.2	chr3	-	271	1	Intergenic	novelGene_17988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATAATAATGAT	NA	False	NA	NA	False	NA	NA	NA	86085756	86085485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86085500_86085800
ES.21762.3	chr3	-	170	1	Intergenic	novelGene_17989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAGATAATAA	NA	False	NA	NA	False	NA	NA	NA	86105032	86104862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86104900_86105000
ES.21762.4	chr3	-	188	1	Intergenic	novelGene_17992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAGAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	86124154	86123966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86124000_86124200
ES.21762.5	chr3	-	178	1	Intergenic	novelGene_17993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	86128892	86128714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86128700_86128900
ES.21763.1	chr3	-	175	1	Intergenic	novelGene_17995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAGGGCCAATCTA	NA	False	NA	NA	False	NA	NA	NA	86176723	86176548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86176500_86176700
ES.21764.1	chr3	-	3522	1	Intergenic	novelGene_18000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATGGGTGGGTAGGGA	NA	False	NA	NA	False	NA	NA	NA	86558837	86555315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86555300_86558800
ES.21765.1	chr3	-	183	1	Intergenic	novelGene_18001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGATTGTATGCTATAAC	NA	False	NA	NA	False	GATAAA	-3	NA	86571463	86571280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86571300_86571500
ES.21766.1	chr3	-	515	1	FSM	ENSMUSG00000094392.2	ENSMUST00000119949.3	136	1	-75	-304	-75	304	mono-exon	FALSE	NA	NA	NA	NA	NA	579	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCACAAGTGACCAAAG	NA	False	NA	NA	False	NA	NA	NA	86579550	86579035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86579000_86579600
ES.21767.1	chr3	-	4346	1	Antisense	novelGene_ENSMUSG00000028080.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGGCTTAGTTAACAT	NA	False	NA	NA	False	AATAAA	-20	NA	86684189	86679843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_86679800_86684200
ES.21767.2	chr3	-	5415	1	Genic_Genomic	ENSMUSG00000104108.2	novel	NA	NA	NA	NA	-1041	-6209	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGACAGTGTCTCAGATAA	NA	False	NA	NA	False	NA	NA	NA	86687001	86681586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_86681600_86687000
ES.21768.1	chr3	+	7286	1	Antisense	novelGene_ENSMUSG00000028078.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGTGGCTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	86735687	86742973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_86735700_86743000
ES.21769.1	chr3	+	2680	1	Intergenic	novelGene_18006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	86802693	86805373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86802700_86805400
ES.2177.1	chr1	-	133	1	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	189837749	189837616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_189837600_189837700
ES.21770.1	chr3	+	943	1	Intergenic	novelGene_18007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86805801	86806744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86805800_86806700
ES.21771.1	chr3	-	7292	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	58	-3338	58	3336	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTGCTCTGTCAGACT	NA	False	NA	NA	False	NA	NA	NA	86828101	86690121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.12	chr3	-	7557	5	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-6524	0	intron_retention	FALSE	canonical	3	231	junction_2	21.3468381733689	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86712991	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890
ES.21771.13	chr3	-	4027	16	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.7009623092881	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828201	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86699301_86699419_86700525_86700583_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.15	chr3	-	3489	16	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	61.1551760324141	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827713	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.17	chr3	-	4010	16	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1232869305513	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828226	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694728_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.18	chr3	-	4001	15	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	67.6540192932439	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828232	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699301_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.19	chr3	-	3445	16	NIC	ENSMUSG00000028078.15	novel	2336	18	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	103.681049377406	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827702	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699375_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86738130_86738179_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.2	chr3	-	5230	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-63	-1681	-19	1673	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGCGGCATATTTTAT	NA	False	NA	NA	False	NA	NA	NA	86827705	86691784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.22	chr3	-	4122	17	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_13	80.8772217623726	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828224	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86738130_86738179_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.23	chr3	-	4203	17	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	81.0173351434741	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828174	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86696798_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.24	chr3	-	3633	16	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	95.8887318139566	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827685	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86696798_86699301_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.25	chr3	-	6669	10	NIC	ENSMUSG00000028078.15	novel	4908	15	NA	NA	-25563	0	intron_retention	FALSE	canonical	3	9	junction_1	84.1261545331962	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86732030	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942
ES.21771.28	chr3	-	3560	16	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	97.7901608320364	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827686	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86696798_86699375_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.29	chr3	-	3617	17	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	80.5588876226577	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827685	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696715_86696798_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.3	chr3	-	4777	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	486	-1251	8	1249	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGTTGAAAGACTCAT	NA	False	NA	NA	False	AATACA	-23	NA	86827673	86692208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.30	chr3	-	4896	17	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_12	101.977249301008	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827732	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86695942_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86736443_86736533_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.31	chr3	-	8561	14	FSM	ENSMUSG00000028078.15	ENSMUST00000191752.6	8042	14	-521	2	-48	0	multi-exon	FALSE	canonical	3	16	junction_1	78.2584853708809	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828207	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.35	chr3	-	5139	14	NIC	ENSMUSG00000028078.15	novel	4908	15	NA	NA	-53	0	intron_retention	FALSE	canonical	3	33	junction_1	65.5733926412627	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86827739	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699375_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.36	chr3	-	8646	15	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-55	0	intron_retention	FALSE	canonical	3	155	junction_10	35.5484722252732	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828214	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.37	chr3	-	4695	2	NNC	ENSMUSG00000028078.15	novel	4908	15	NA	NA	918	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86698704	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86695231_86695780
ES.21771.39	chr3	-	4051	16	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.2755239611997	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828214	86693459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701205_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.40	chr3	-	3735	18	NNC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	110.144353222091	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGGGGTGGGTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	86827685	86693460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86696618_86696798_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712888_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86776222_86776317_86813191_86813524_86827056
ES.21771.42	chr3	-	6654	16	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-63	2	intron_retention	FALSE	canonical	3	12	junction_1	65.5555404896404	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86828222	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696715_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.43	chr3	-	3646	17	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	83.2879042838755	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86827695	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86696798_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.44	chr3	-	3345	4	NIC	ENSMUSG00000028078.15	novel	4908	15	NA	NA	85	2	intron_retention	FALSE	canonical	1	1	junction_2	106.58747059992	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86706382	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86696798_86699375_86701221_86706317
ES.21771.45	chr3	-	4642	17	NNC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1894255533318	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86828214	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86695359_86695942_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.46	chr3	-	5906	15	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-60	2	intron_retention	FALSE	canonical	3	12	junction_1	85.8279008914267	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86827555	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696715_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.47	chr3	-	4081	16	NNC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-69	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1232869305513	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86828228	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86699294_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.48	chr3	-	4009	17	NNC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.111726892276	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86828177	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86695928_86696013_86699375_86699419_86700525_86700583_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.5	chr3	-	3669	15	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	189	2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	82.5450093671845	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGGGTGAAATTTCTG	NA	False	NA	1	True	AATAAA	-24	NA	86827970	86693455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699375_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.50	chr3	-	3907	18	NNC	ENSMUSG00000028078.15	novel	2336	18	NA	NA	-48	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	100.008269554266	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86828207	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86738130_86738179_86739039_86739142_86743611_86743715_86813191_86813270_86813389_86813524_86827056
ES.21771.52	chr3	-	5085	13	NNC	ENSMUSG00000028078.15	novel	2336	18	NA	NA	-32603	2	intron_retention	FALSE	canonical	0	0	junction_2	111.662437730868	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86739070	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86695928_86696013_86696618_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039
ES.21771.54	chr3	-	3337	14	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	73.0609699185809	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86827689	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.55	chr3	-	4248	18	NNC	ENSMUSG00000028078.15	novel	2336	18	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.6033260947876	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86827708	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86695339_86695942_86698686_86698776_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.56	chr3	-	5582	16	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	-46	2	intron_retention	FALSE	canonical	1	1	junction_1	67.9079769492019	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCATGGGGTGGGTGA	NA	False	NA	-7	True	AATAAA	-16	NA	86827732	86693463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86696798_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.58	chr3	-	3533	16	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.2392724694213	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCATGGGGTGGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	86827696	86693464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86699301_86699419_86700525_86700596_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.61	chr3	-	5669	14	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-39	0	intron_retention	FALSE	canonical	3	73	junction_9	54.9158581767593	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86828198	86693465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699301_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.63	chr3	-	3801	2	NNC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	1716	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86697906	86693465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86694720_86695359
ES.21771.64	chr3	-	3339	14	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	73.452717956165	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827673	86693465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86699301_86699419_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.65	chr3	-	5412	15	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	14125	0	intron_retention	FALSE	canonical	3	9	junction_1	68.2643795123348	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86813352	86693465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696618_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191
ES.21771.66	chr3	-	5552	1	ISM	ENSMUSG00000028078.15	ENSMUST00000191752.6	8042	14	128560	117	496	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCTACTTGCTTGTC	NA	False	NA	-118	True	NA	NA	NA	86699126	86693574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_86693600_86699100
ES.21771.67	chr3	-	3991	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	-614	109	-97	-109	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCTACTTGCTTGTC	NA	False	NA	-118	True	NA	NA	NA	86828256	86693574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.69	chr3	-	3409	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	-92	695	-92	364	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTGGACGAATTAGGAT	NA	False	NA	NA	False	NA	NA	NA	86828251	86694154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.7	chr3	-	10276	13	NIC	ENSMUSG00000028078.15	novel	4908	15	NA	NA	-58	1	intron_retention	FALSE	canonical	3	155	junction_8	37.7557942573057	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTGGGTGAAATTTCT	NA	False	NA	0	True	AATAAA	-23	NA	86828217	86693456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.70	chr3	-	4996	15	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-66	271	intron_retention	FALSE	canonical	3	12	junction_1	91.7051619849934	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCATCTGTGTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	86828225	86694247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86694720_86696715_86696798_86699301_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.71	chr3	-	2624	12	NNC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-66	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	87.8457513660043	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTTTCTCTGTTTGTC	NA	False	NA	NA	False	AATAAA	-25	NA	86828225	86706222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827050
ES.21771.72	chr3	-	2653	12	FSM	ENSMUSG00000028078.15	ENSMUST00000194452.2	2066	12	-585	-2	-107	2	multi-exon	FALSE	canonical	3	155	junction_7	39.3729781062936	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACACCTTTCTCTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	86828266	86706225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ES.21771.73	chr3	-	1611	1	Intergenic	novelGene_18003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGATGTTTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	86759244	86757633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86757600_86759200
ES.21771.74	chr3	-	5487	1	Intergenic	novelGene_18004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAGA	546	False	NA	NA	False	NA	NA	NA	86798641	86793154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86793200_86798600
ES.21771.75	chr3	-	6491	2	Intergenic	novelGene_18005	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGGGTTGAGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	86805103	86798563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_86801600_86801648
ES.21772.1	chr3	+	132	1	Intergenic	novelGene_18008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	86831493	86831625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86831500_86831600
ES.21773.1	chr3	+	1467	6	NNC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	-7807	-23	intron_retention	FALSE	canonical	0	0	junction_1	28.0855834904671	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAACTATAAGG	NA	False	NA	-21	True	AAGAAA	-19	NA	86886050	86897064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_86886169_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ES.21773.2	chr3	+	1299	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-22	250	-22	-3	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACATGTATGTGCGGA	NA	False	NA	NA	False	ATTAAA	-14	NA	86893835	86896837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ES.21773.3	chr3	+	1539	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-14	2	-14	-2	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTTTATTGTTTTAT	NA	False	NA	0	True	AATAAA	-12	NA	86893843	86897085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ES.21773.4	chr3	+	1678	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	-5	-146	-5	146	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAATTAACAC	NA	False	NA	NA	False	AATAAA	-31	NA	86893852	86897233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ES.21773.5	chr3	+	2383	4	NIC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	-7	146	intron_retention	FALSE	canonical	3	18	junction_1	21.9291789378647	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAATTAACAC	NA	False	NA	NA	False	AATAAA	-31	NA	86893885	86897233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_86894013_86894294_86895863_86896457_86896555_86896642
ES.21773.6	chr3	+	1502	6	FSM	ENSMUSG00000041750.14	ENSMUST00000192481.2	1131	6	9	-380	9	133	multi-exon	FALSE	canonical	0	0	junction_2	25.3929123969662	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGGAACATTAAAAACA	NA	False	NA	NA	False	AATAAA	-18	NA	86893901	86897220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_86894013_86894294_86894454_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ES.21774.1	chr3	-	2561	4	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	57	junction_3	13.490737563232	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	86906626	86903140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86903909_86903996_86904094_86904644_86906213_86906498
ES.21774.4	chr3	-	2238	10	NNC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	-9920	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	35.9567641604315	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAATGTATCCAGA	4235	False	NA	NA	False	AATAAA	-10	NA	86916668	86903150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498_86906635_86908206_86908325_86908709_86908781_86912803_86912995_86916632
ES.21774.5	chr3	-	2139	4	ISM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	365	10	-122	-10	intron_retention	FALSE	canonical	3	63	junction_3	10.6770782520313	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAATGTATCCAGA	NA	False	NA	NA	False	AATAAA	-10	NA	86906383	86903150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378
ES.21774.6	chr3	-	2241	5	NIC	ENSMUSG00000028076.13	novel	1946	6	NA	NA	18	-10	intron_retention	FALSE	canonical	3	57	junction_3	14.2894191624432	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAATGTATCCAGA	NA	False	NA	NA	False	AATAAA	-10	NA	86906598	86903150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86903909_86903996_86904094_86904644_86905658_86905939_86906213_86906498
ES.21774.8	chr3	-	1459	4	ISM	ENSMUSG00000028076.13	ENSMUST00000063869.11	1421	5	238	10	-117	-10	3prime_fragment	FALSE	canonical	0	0	junction_3	40.3236903073119	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAATGTATCCAGA	NA	False	NA	NA	False	AATAAA	-10	NA	86906378	86903150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_86903909_86903996_86904094_86904644_86904924_86906053
ES.21775.1	chr3	+	2426	2	Intergenic	novelGene_18009	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTTCTGTTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	86916813	86920481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86917200_86918441
ES.21775.2	chr3	+	1343	3	Intergenic	novelGene_18010	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTTCTGTTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	86916821	86920481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86916875_86918441_86918689_86919438
ES.21775.3	chr3	+	3508	2	Intergenic	novelGene_18011	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTTCTGTTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	86916826	86920481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86917244_86917390
ES.21775.4	chr3	+	2414	2	Intergenic	novelGene_18012	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCTGATGTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86916826	86923848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86916875_86921482
ES.21775.5	chr3	+	5020	1	Intergenic	novelGene_18013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCTGATGTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86918828	86923848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_86918800_86923800
ES.21776.1	chr3	+	168	1	Intergenic	novelGene_18015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGGGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	87063520	87063688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87063500_87063700
ES.21777.1	chr3	-	7284	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	-45	-3	2	3	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTGTTATTTTAATA	NA	False	NA	NA	False	AAAAAG	-6	NA	87082052	86985896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.10	chr3	-	4347	12	ISM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	82465	2099	82315	-2091	3prime_fragment	FALSE	canonical	3	39	junction_8	8.34285956882435	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTGCGGCTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	86999542	86987998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411
ES.21777.11	chr3	-	4890	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	-64	2452	-64	-2452	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGTGGGGTTTGGC	NA	False	NA	NA	False	AATAGA	-28	NA	87082118	86988359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ES.21777.13	chr3	-	3481	16	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	-4734	2495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.9284511348579	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCCTGCTGGTGGAT	NA	False	NA	NA	False	NA	NA	NA	87086788	86989439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87086701
ES.21777.14	chr3	-	3605	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	-48	3679	-1	2356	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87082055	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.15	chr3	-	3285	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	-64	2356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.9284511348579	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87082118	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87082085
ES.21777.16	chr3	-	3233	15	NIC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	31	2356	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	16.1227751194086	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87081826	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87081702
ES.21777.17	chr3	-	3414	17	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	-4734	2356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	19.6745989476279	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87086788	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87086527_87086600_87086701
ES.21777.19	chr3	-	3604	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	1	2356	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.0276331101882	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87082006	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.20	chr3	-	3812	13	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	78806	2356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.2144911182011	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	9197	False	NA	NA	False	AATAAA	-20	NA	87003051	86989578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86992778_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943
ES.21777.21	chr3	-	3358	16	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	-4756	2350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.9284511348579	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCTGTAGGGGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	87086810	86989584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87086701
ES.21777.23	chr3	-	3672	17	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	22	2348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.0916897141979	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGCTGTAGGGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	87081835	86989586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87007685_87007981_87048283_87048427_87081702
ES.21777.24	chr3	-	3177	16	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	3	2078	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	16.5185417704537	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTTCTTCTCAGCTT	NA	False	NA	NA	False	CATAAA	-15	NA	87081854	86989856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ES.21777.25	chr3	-	3008	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	13	4215	13	1820	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGCTCCTCTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	87081994	86990114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.27	chr3	-	2898	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	16	1815	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.0276331101882	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGCCTGCTCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	87081841	86990119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.28	chr3	-	2083	14	FSM	ENSMUSG00000041734.16	ENSMUST00000041732.9	2160	14	71	6	71	-6	multi-exon	FALSE	canonical	3	30	junction_13	10.7356619670062	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGTGCACACTTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	87081786	86991940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ES.21777.29	chr3	-	8493	1	Intergenic	novelGene_18014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTCTTGGATCCATA	NA	False	NA	NA	False	NA	NA	NA	87045487	87036994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87037000_87045500
ES.21777.3	chr3	-	6966	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	15.7177889312997	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTCTGTGTTATTTTA	NA	False	NA	NA	False	AAAAAG	-3	NA	87082124	86985899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87082089
ES.21777.4	chr3	-	6336	17	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.198837728368	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTCTGTGTTATTTT	NA	False	NA	NA	False	AAAAAG	-2	NA	87081986	86985900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86987124_86988004_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ES.21777.5	chr3	-	7870	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	-62	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.3982817108458	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTTCTGTGTTATTT	NA	False	NA	NA	False	AAAAAG	-1	NA	87082116	86985901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86992778_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87082085
ES.21777.6	chr3	-	7269	16	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.0276331101882	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGTTCTGTGTTATTT	NA	False	NA	NA	False	AAAAAG	-1	NA	87081994	86985901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ES.21777.7	chr3	-	10859	16	NNC	ENSMUSG00000041734.16	novel	7278	16	NA	NA	10477	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.9284511348579	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCATGTTCTGTGTTAT	NA	False	NA	NA	False	TTTAAA	-2	NA	87071380	86985903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87067451
ES.21777.8	chr3	-	3399	1	ISM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	91857	852	91707	-844	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCCCTTCTCGCTGC	9209	False	NA	NA	False	NA	NA	NA	86990150	86986751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_86986800_86990200
ES.21777.9	chr3	-	5297	15	NNC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	16	-1820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	20.6827345920234	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTCAGTAGGCTGCTGT	NA	False	NA	NA	False	AATGAA	-23	NA	87081991	86987727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995841_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87081702
ES.21778.1	chr3	-	172	1	Intergenic	novelGene_18016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	87096009	87095837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87095800_87096000
ES.21779.1	chr3	-	1088	2	Intergenic	novelGene_18017	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTTTTAAAGATTTAT	NA	False	NA	NA	False	TTTAAA	-12	NA	87099725	87097316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87098141_87099461
ES.2178.1	chr1	-	3386	5	NNC	ENSMUSG00000010175.14	novel	3285	5	NA	NA	-96	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCCTTTGCTTGACTCT	15	False	NA	NA	False	ATTAAA	-19	NA	189901692	189854644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_189855603_189879148_189879344_189885612_189885719_189892716_189894511_189901359
ES.21780.1	chr3	-	184	1	Intergenic	novelGene_18018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGCT	4007	False	NA	NA	False	NA	NA	NA	87108459	87108275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87108300_87108500
ES.21781.1	chr3	-	407	1	FSM	ENSMUSG00000074506.5	ENSMUST00000098980.5	461	1	284	-230	284	230	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATCTCAGACATTAAGG	NA	False	NA	NA	False	ATTAAA	-40	NA	87115028	87114621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87114600_87115000
ES.21782.1	chr3	-	181	1	Intergenic	novelGene_18019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATAACAGACT	NA	False	NA	NA	False	NA	NA	NA	87120815	87120634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87120600_87120800
ES.21783.1	chr3	+	177	1	Intergenic	novelGene_18020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGGGGGCAGGGGTA	NA	False	NA	4	True	NA	NA	NA	87398829	87399006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87398800_87399000
ES.21784.1	chr3	+	5141	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	167	1	-4	-1	multi-exon	FALSE	canonical	3	12	junction_1	13.4605906259718	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAATGTTTGCTGAGTA	NA	False	NA	NA	False	ATTAAA	-23	NA	87432880	87447462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
ES.21784.10	chr3	+	5117	5	NNC	ENSMUSG00000003382.19	novel	5127	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.9432587635025	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTTTGCTGAGTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	87432920	87447464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436658_87442817
ES.21784.12	chr3	+	6969	3	FSM	ENSMUSG00000003382.19	ENSMUST00000136680.2	7263	3	289	5	278	-5	multi-exon	FALSE	canonical	3	40	junction_1	4	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTTAAATGTTTGCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	87433202	87447458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87435415_87436530_87436647_87442817
ES.21784.13	chr3	+	5059	4	ISM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	1678	-12	1638	-2	3prime_fragment	FALSE	canonical	3	37	junction_1	4.64279609239471	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAATGTTTGCTGAGT	NA	False	NA	NA	False	ATTAAA	-22	NA	87434562	87447461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87434624_87435176_87435415_87436530_87436647_87442817
ES.21784.15	chr3	+	4633	1	NIC	ENSMUSG00000003382.19	novel	5309	5	NA	NA	9892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAGTACTTAAA	6992	False	NA	NA	False	ATTAAA	-10	NA	87442816	87447449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87442800_87447400
ES.21784.3	chr3	+	5308	6	NNC	ENSMUSG00000003382.19	novel	5309	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.6733322037727	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTAAATGTTTGCTGAG	NA	False	NA	NA	False	ATTAAA	-21	NA	87432888	87447460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87432967_87434567_87434624_87435176_87435415_87436116_87436294_87436530_87436647_87442817
ES.21784.5	chr3	+	4958	6	NNC	ENSMUSG00000003382.19	novel	5127	5	NA	NA	11	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.1347599924831	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTACTTAAATGTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	87432895	87447455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817_87443561_87443724
ES.21784.6	chr3	+	3940	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	14	1173	14	-1173	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGTGAACTCCATGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	87432898	87446276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
ES.21784.7	chr3	+	3952	5	NNC	ENSMUSG00000003382.19	novel	5127	5	NA	NA	-4	-1172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4847910456137	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTGAACTCCATGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	87432909	87446277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87432967_87434542_87434624_87435176_87435415_87436530_87436647_87442817
ES.21784.8	chr3	+	5058	6	NNC	ENSMUSG00000003382.19	novel	5127	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.1347599924831	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAGTACTTAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	87432912	87447449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817_87444594_87444634
ES.21784.9	chr3	+	1204	4	FSM	ENSMUSG00000003382.19	ENSMUST00000117293.2	2151	4	-6	953	1	-953	multi-exon	FALSE	canonical	3	20	junction_1	8.80656320908194	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTGCTCAGGAGTCAC	NA	False	NA	NA	False	ATTAAA	-14	NA	87432914	87437385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530
ES.21785.1	chr3	-	2835	1	Antisense	novelGene_ENSMUSG00000003382.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCGAAGCAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	87440163	87437328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_87437300_87440200
ES.21786.10	chr3	+	6702	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	20.0595759618992	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGGTTGTATGATTC	6155	False	NA	14	True	AAGAAA	-15	NA	87524868	87645343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.11	chr3	+	2980	9	ISM	ENSMUSG00000041977.19	ENSMUST00000142799.2	3584	19	-27	18292	6	-2	intron_retention	FALSE	canonical	3	45	junction_7	15.3927742788621	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	6158	False	NA	NA	False	NA	NA	NA	87524871	87606450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294
ES.21786.15	chr3	+	6664	40	NNC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	23.4307911173863	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6164	False	NA	15	True	AAGAAA	-16	NA	87524877	87645344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641763_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.17	chr3	+	6809	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	21.0653744329409	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6166	False	NA	12	True	AAGAAA	-13	NA	87524879	87645341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.19	chr3	+	6652	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.6390460440072	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6167	False	NA	15	True	AAGAAA	-16	NA	87524880	87645344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.2	chr3	+	6727	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-46	5	combination_of_known_junctions	TRUE	canonical	3	45	junction_7	17.5002967921014	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTGTATGATTCTTA	6106	False	NA	17	True	AAGAAA	-18	NA	87524819	87645346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.21	chr3	+	6673	40	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	25.8878123779761	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6167	False	NA	12	True	AAGAAA	-13	NA	87524880	87645341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633248_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643239_87643303_87644350
ES.21786.22	chr3	+	6319	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-1	-101	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	24.487023441401	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAGATATGGAAATG	6167	False	NA	-90	True	NA	NA	NA	87524880	87645239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.23	chr3	+	6932	41	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	25.8073511813979	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6169	False	NA	15	True	AAGAAA	-16	NA	87524882	87645344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87567848_87567999_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.24	chr3	+	6504	37	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.684005125093	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6173	False	NA	10	True	AAGAAA	-11	NA	87524886	87645339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620655_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.25	chr3	+	7370	38	NIC	ENSMUSG00000041977.19	novel	6124	39	NA	NA	-2	-63	intron_retention	FALSE	canonical	0	0	junction_20	23.3476911545835	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATACTCTTATTTTC	6176	False	NA	-52	True	NA	NA	NA	87524889	87645277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87642879_87643112_87643303_87644350
ES.21786.26	chr3	+	2973	22	NNC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-2	1731	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	34.8226475163126	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGAGCTTGAGTCTCTT	6176	False	NA	NA	False	AATAAA	-16	NA	87524889	87626473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87589166_87589200_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87626389
ES.21786.28	chr3	+	6414	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	-101	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	18.9389469278987	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAGATATGGAAATG	6183	False	NA	-90	True	NA	NA	NA	87524896	87645239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.29	chr3	+	6787	40	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	22.869150128796	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6183	False	NA	10	True	AAGAAA	-11	NA	87524896	87645339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629636_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.3	chr3	+	6843	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	18.8502175978037	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGGTTGTATGATTC	6107	False	NA	14	True	AAGAAA	-15	NA	87524820	87645343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.31	chr3	+	6645	39	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.0878151580962	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTGTGGTTGTATGA	6185	False	NA	11	True	AAGAAA	-12	NA	87524898	87645340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87597010_87597143_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.32	chr3	+	6797	41	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	24.1619406298418	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTGTGGTTGTATG	6185	False	NA	10	True	AAGAAA	-11	NA	87524898	87645339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641724_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.33	chr3	+	6731	41	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.1583801913391	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTTGTATGATTCT	6186	False	NA	15	True	AAGAAA	-16	NA	87524899	87645344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87619930_87619996_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.34	chr3	+	4351	2	ISM	ENSMUSG00000041977.19	ENSMUST00000136072.8	2408	11	34	12509	1	-2214	intron_retention	FALSE	canonical	3	72	junction_1	0	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGCAGCAGAGACTTCA	6186	False	NA	NA	False	AAGAAA	-1	NA	87524899	87593943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87526100_87590792
ES.21786.35	chr3	+	6501	38	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	25.204206172096	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGGTTGTATGATTC	6189	False	NA	14	True	AAGAAA	-15	NA	87524902	87645343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87609464_87609540_87609763_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.38	chr3	+	6366	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-184	-101	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	20.6488347128839	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAGATATGGAAATG	6510	False	NA	-90	True	NA	NA	NA	87525223	87645239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.39	chr3	+	6430	42	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-111	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.4177369999982	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTGTATGATTCTTA	6583	False	NA	17	True	AAGAAA	-18	NA	87525296	87645346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87589166_87589200_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.4	chr3	+	6536	39	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-18	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	26.7622134077508	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGAAATGACTGTTTT	6134	False	NA	-82	True	NA	NA	NA	87524847	87645247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87619930_87619996_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.40	chr3	+	3428	1	Intergenic	novelGene_18022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	630	False	NA	NA	False	NA	NA	NA	87539968	87543396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87540000_87543400
ES.21786.41	chr3	+	146	1	Intergenic	novelGene_18023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	87565901	87566047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87565900_87566000
ES.21786.42	chr3	+	14639	3	ISM	ENSMUSG00000041977.19	ENSMUST00000136072.8	2408	11	64625	1	63423	-1	intron_retention	FALSE	canonical	3	84	junction_1	9.5	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87589490	87606451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87590885_87591774_87591874_87593305
ES.21786.45	chr3	+	3390	17	NNC	ENSMUSG00000041977.19	novel	6124	39	NA	NA	106975	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.5065096732308	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	3551	False	NA	12	True	AAGAAA	-13	NA	87633042	87645341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638611_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.46	chr3	+	3207	8	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	111618	0	intron_retention	FALSE	canonical	3	60	junction_5	18.4810990043385	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTGTGGTTGTATGA	8194	False	NA	11	True	AAGAAA	-12	NA	87637685	87645340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87642879_87643112_87643303_87644350
ES.21786.47	chr3	+	3738	1	Genic_Genomic	ENSMUSG00000041977.19	novel	NA	NA	NA	NA	115537	1	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTGGTTGTATGATT	NA	False	NA	13	True	AAGAAA	-14	NA	87641604	87645342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_87641600_87645300
ES.21786.5	chr3	+	6564	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-12	5	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	18.9389469278987	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTGTATGATTCTTA	6140	False	NA	17	True	AAGAAA	-18	NA	87524853	87645346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.6	chr3	+	6585	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-11	-101	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	17.5002967921014	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAGATATGGAAATG	6141	False	NA	-90	True	NA	NA	NA	87524854	87645239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.7	chr3	+	6706	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_21	21.8596322932791	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTGGTTGTATGATT	6144	False	NA	13	True	AAGAAA	-14	NA	87524857	87645342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21786.8	chr3	+	6697	40	NNC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	27.8461774566647	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6148	False	NA	12	True	AAGAAA	-13	NA	87524861	87645341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639147_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ES.21786.9	chr3	+	6581	39	NIC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_20	20.8896487242537	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTGGTTGTATGATT	6149	False	NA	13	True	AAGAAA	-14	NA	87524862	87645342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
ES.21787.1	chr3	-	167	1	Intergenic	novelGene_18021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTGTAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	87537401	87537234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87537200_87537400
ES.21788.1	chr3	-	2925	8	NNC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	11165	0	intron_retention	FALSE	canonical	0	0	junction_4	3.11677488989592	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	87691304	87685550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689437_87689605_87690031_87690135_87690380_87690612_87690976
ES.21788.2	chr3	-	4054	5	NIC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	11170	0	intron_retention	FALSE	canonical	2	3	junction_4	2.27760839478607	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	87691299	87685550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87685907_87686942_87687102_87687377_87688911_87689047_87690135_87690380
ES.21788.3	chr3	-	3045	15	NIC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	-48	0	intron_retention	FALSE	canonical	0	0	junction_9	2.82120252259021	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	False	NA	NA	False	NA	NA	NA	87702517	87685550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87685907_87686942_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689457_87690135_87690380_87690437_87690976_87691307_87693274_87693408_87695623_87695767_87695928_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ES.21789.1	chr3	+	4984	2	Antisense	novelGene_ENSMUSG00000004895.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87780982	87787672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_87781989_87783694
ES.21789.2	chr3	+	210	1	Intergenic	novelGene_18024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAAAGTCCTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	87786765	87786975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87786800_87787000
ES.2179.1	chr1	-	4082	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	10	-97	9	97	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTTAGTGTGTTCGTTT	NA	False	NA	97	True	NA	NA	NA	190643957	190504978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.10	chr1	-	3889	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	11.9782840983518	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCTTCCTCATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	190643956	190505077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.11	chr1	-	3861	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	12.6864788480543	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCCTTCCTCATTTA	NA	False	NA	-3	True	AATAAA	-13	NA	190643952	190505078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190631647_190631769_190637279_190637316_190643752
ES.2179.12	chr1	-	2321	13	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	12.7962125472952	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCCTTCCTCATTTA	NA	False	NA	-3	True	AATAAA	-13	NA	190643955	190505078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.14	chr1	-	3404	10	NIC	ENSMUSG00000089872.11	novel	4103	15	NA	NA	14294	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.1445707991794	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCCTTCCTCATTTA	NA	False	NA	-3	True	AATAAA	-13	NA	190617620	190505078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530
ES.2179.15	chr1	-	4024	16	NNC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.662268886297	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCCTTCCTCATTTA	NA	False	NA	-3	True	AATAAA	-13	NA	190643943	190505078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190597836_190597893_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.16	chr1	-	5568	12	ISM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	11	23185	10	5	5prime_fragment	FALSE	canonical	3	35	junction_4	5.58036700117193	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTTCCTTTCATACTGCA	NA	False	NA	3	True	AATAAA	-17	NA	190643956	190528260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.17	chr1	-	5355	12	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.3472078397277	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTTCCTTTCATACTGCA	NA	False	NA	3	True	AATAAA	-17	NA	190643955	190528260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529745_190529863_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.18	chr1	-	5835	11	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-8	5	intron_retention	FALSE	canonical	3	35	junction_3	5.54616984954482	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTTCCTTTCATACTGCA	NA	False	NA	3	True	AATAAA	-17	NA	190643952	190528260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.19	chr1	-	5707	12	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	1	5	intron_retention	FALSE	non_canonical	0	0	junction_1	13.6569541514283	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTTCCTTTCATACTGCA	NA	False	NA	3	True	AATAAA	-17	NA	190643943	190528260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529745_190529863_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.2	chr1	-	3842	13	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	2	95	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	12.8870628495747	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTCTTAGTGTGTTCGT	NA	False	NA	95	True	NA	NA	NA	190643929	190504980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190631647_190631769_190637279_190637316_190643752
ES.2179.20	chr1	-	5472	13	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.3749350984926	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCTTCCTTTCATACT	NA	False	NA	0	True	AATAAA	-14	NA	190643982	190528263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529745_190529863_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.21	chr1	-	4135	14	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.2227675660766	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCTTCCTTTCATACT	NA	False	NA	0	True	AATAAA	-14	NA	190643943	190528263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529305_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576797_190580340_190580471_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.22	chr1	-	5726	10	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_7	14.4025032117834	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCTTCCTTTCATACT	NA	False	NA	0	True	AATAAA	-14	NA	190643962	190528263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190631647_190631769_190637279_190637316_190643752
ES.2179.23	chr1	-	5620	11	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	-8	2	intron_retention	FALSE	non_canonical	0	0	junction_1	17.7732945736011	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCTTCCTTTCATACT	NA	False	NA	0	True	AATAAA	-14	NA	190643952	190528263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529745_190529863_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.24	chr1	-	5431	10	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	19.1027113323453	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGGCTTCCTTTCATAC	NA	False	NA	-1	True	AATAAA	-13	NA	190643952	190528264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190643752
ES.2179.25	chr1	-	3862	12	NNC	ENSMUSG00000089872.11	novel	2913	9	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.1478741182941	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGGCTTCCTTTCATAC	NA	False	NA	-1	True	AATAAA	-13	NA	190643891	190528264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190529305_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.27	chr1	-	3183	12	ISM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	15	25566	-8	3	5prime_fragment	FALSE	canonical	3	35	junction_4	5.58036700117193	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTGTTCTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	190643952	190530641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.28	chr1	-	3087	11	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	13.0341858203725	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTCATTGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	190643954	190530646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.3	chr1	-	3650	12	NNC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.2448340175652	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	190643946	190505075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531208_190532779_190541079_190541213_190542270_190542319_190603788_190604149_190617530_190617625_190631647_190631769_190637279_190637316_190643752
ES.2179.4	chr1	-	3809	13	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	12.8741234868847	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	190643962	190505075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.5	chr1	-	3619	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	12.8661750935724	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCCTCATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	190643952	190505076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.6	chr1	-	3753	12	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.3472078397277	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTTCCTCATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	190643998	190505076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.8	chr1	-	3880	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.9578287318434	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCTTCCTCATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	190643948	190505077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ES.2179.9	chr1	-	2835	7	NIC	ENSMUSG00000089872.11	novel	4103	15	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.8013732304249	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCTTCCTCATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	190576762	190505077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190505901_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683
ES.21790.1	chr3	+	161	1	Intergenic	novelGene_18025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	87789502	87789663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87789500_87789700
ES.21791.1	chr3	-	2323	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	-223	-1	-223	1	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTCTGGATCTCAGAG	2076	False	NA	2	True	AATAAA	-28	NA	87793138	87766208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
ES.21791.3	chr3	-	2858	6	NIC	ENSMUSG00000004895.10	novel	2099	7	NA	NA	28	-12	intron_retention	FALSE	canonical	3	312	junction_4	32.3332646047379	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCCTACAAGGTGT	2327	False	NA	-11	True	AATAAA	-15	NA	87792887	87766221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
ES.21791.4	chr3	-	4137	5	ISM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	12627	12	12627	-12	intron_retention	FALSE	canonical	3	348	junction_4	24.2628831757481	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCCTACAAGGTGT	3012	False	NA	-11	True	AATAAA	-15	NA	87780288	87766221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889
ES.21791.5	chr3	-	1945	7	NNC	ENSMUSG00000004895.10	novel	2099	7	NA	NA	28	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	142.242359685464	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGCTGCCTACAAGGT	2327	False	NA	-13	True	AATAAA	-13	NA	87792887	87766223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777345_87779516_87779565_87792181
ES.21792.1	chr3	-	223	1	Intergenic	novelGene_18026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGATATGTGTGTGC	NA	False	NA	NA	False	AAAAAG	-13	NA	87798828	87798605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87798600_87798800
ES.21793.1	chr3	-	403	1	Intergenic	novelGene_18027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAATTAAGGACAGA	NA	False	NA	NA	False	NA	NA	NA	87808014	87807611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87807600_87808000
ES.21794.1	chr3	-	2235	2	Intergenic	novelGene_18028	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87813238	87810076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87811987_87812913
ES.21795.1	chr3	+	2637	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-384	-8	-384	8	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTTCAAGTGTCTGG	NA	False	NA	33	True	AATAAA	-29	NA	87813243	87823447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.10	chr3	+	2596	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	2809	junction_3	164.544489086961	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATTCTGACTAATTC	NA	False	NA	18	True	AATAAA	-14	NA	87813625	87823432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820759_87821358_87821545_87821779
ES.21795.11	chr3	+	1805	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-2	442	-2	-442	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGAAAATTACCAAA	NA	False	NA	35	True	CATAAA	-35	NA	87813625	87822997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.12	chr3	+	2109	6	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1142.45059411775	2303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGATTCTGACTAATT	NA	False	NA	17	True	AATAAA	-13	NA	87813628	87823431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814022_87820397_87820475_87820619_87820681_87821407_87821545_87821779_87821998_87822208
ES.21795.13	chr3	+	2454	5	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	1	1	1	-1	intron_retention	FALSE	canonical	3	2809	junction_4	161.057443168579	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813628	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779
ES.21795.14	chr3	+	5374	2	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	1	-1939	1	1939	intron_retention	FALSE	canonical	3	3016	junction_1	0	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTGAAGTTATCTGCA	NA	False	NA	NA	False	NA	NA	NA	87813628	87825378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87814022_87820397
ES.21795.15	chr3	+	2662	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	4	-1	intron_retention	FALSE	canonical	3	39	junction_3	1236.18634820969	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813631	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821147_87821545_87821779
ES.21795.16	chr3	+	4577	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	5	1911	intron_retention	FALSE	canonical	3	39	junction_2	1437.11627487131	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	87813632	87825350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820759_87821147_87821218_87821358_87821545_87821779
ES.21795.17	chr3	+	2308	7	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	1324.72848371112	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813633	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821147_87821218_87821358_87821545_87821779_87821998_87822208
ES.21795.18	chr3	+	3177	3	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	22	-2	intron_retention	FALSE	canonical	3	2809	junction_2	103.5	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACTAATTCTTTTC	NA	False	NA	23	True	AATAAA	-19	NA	87813649	87823437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87821545_87821779
ES.21795.2	chr3	+	4420	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-236	-1939	-236	1939	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTGAAGTTATCTGCA	NA	False	NA	NA	False	NA	NA	NA	87813391	87825378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.20	chr3	+	1655	7	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	44	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.60593951753	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCCACAAAAGAAGAA	NA	False	NA	69	True	AATAAA	-29	NA	87813671	87823031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87813785_87813922_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.21	chr3	+	2126	7	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1099.60593951753	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87813673	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208_87822571_87822640
ES.21795.22	chr3	+	2336	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	47	-7	intron_retention	FALSE	canonical	3	2720	junction_4	190.603482392112	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATTCTGACTAATTC	NA	False	NA	18	True	AATAAA	-14	NA	87813674	87823432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.24	chr3	+	2177	6	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	51	-8	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	1138.46482598278	2303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGATTCTGACTAATT	NA	False	NA	17	True	AATAAA	-13	NA	87813678	87823431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821367_87821545_87821779_87821998_87822208
ES.21795.25	chr3	+	2400	6	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	51	-5	intron_retention	FALSE	canonical	3	39	junction_3	1126.90666871751	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTCTGACTAATTCTT	NA	False	NA	20	True	AATAAA	-16	NA	87813678	87823434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821147_87821545_87821779_87821998_87822208
ES.21795.26	chr3	+	2793	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	51	-1	intron_retention	FALSE	canonical	3	2720	junction_4	107.463947442852	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813678	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87821545_87821779_87821998_87822208
ES.21795.28	chr3	+	2910	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	79	-1	intron_retention	FALSE	canonical	3	2720	junction_3	124.00089605411	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813706	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87821545_87821779_87821998_87822208
ES.21795.3	chr3	+	2553	6	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	39	junction_3	1396.04464112005	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813599	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821147_87821218_87821358_87821545_87821779
ES.21795.30	chr3	+	1941	5	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	90	425	90	-425	intron_retention	FALSE	canonical	3	2809	junction_4	161.057443168579	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAAACCC	NA	False	NA	52	True	AATAAA	-12	NA	87813717	87823014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779
ES.21795.31	chr3	+	2155	6	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	104	-7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	1140.85627490933	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATTCTGACTAATTC	NA	False	NA	18	True	AATAAA	-14	NA	87813731	87823432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821337_87821545_87821779_87821998_87822208
ES.21795.32	chr3	+	1181	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	218	846	218	509	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCGTCTACCTGAGC	NA	False	NA	NA	False	TATAAA	-18	NA	87813845	87822593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.33	chr3	+	4175	5	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	220	-1939	220	1939	intron_retention	FALSE	canonical	3	2809	junction_4	161.057443168579	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTGAAGTTATCTGCA	NA	False	NA	NA	False	NA	NA	NA	87813847	87825378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779
ES.21795.34	chr3	+	2045	7	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1412.9604166037	2303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87813857	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814022_87820397_87820475_87820656_87820759_87821147_87821218_87821358_87821545_87821779_87821998_87822208
ES.21795.35	chr3	+	4603	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-165	1911	intron_retention	FALSE	canonical	3	2809	junction_3	91.3345498702435	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	87813991	87825350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87821545_87821779
ES.21795.36	chr3	+	2185	6	NNC	ENSMUSG00000004897.17	novel	763	6	NA	NA	-97	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1170.16802212332	2303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87814059	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87814397_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.37	chr3	+	2157	6	NIC	ENSMUSG00000004897.17	novel	763	6	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	1161.46021886245	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87814165	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814473_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.38	chr3	+	2007	7	NIC	ENSMUSG00000004897.17	novel	763	6	NA	NA	25	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	1377.4807520333	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87814383	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814473_87820397_87820475_87820619_87820759_87821147_87821218_87821358_87821545_87821779_87821998_87822208
ES.21795.39	chr3	+	1887	6	NIC	ENSMUSG00000004897.17	novel	377	4	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	1168.18885459501	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87817331	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87817371_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.4	chr3	+	3083	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	2809	junction_3	91.3345498702435	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87813599	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820475_87820619_87821545_87821779
ES.21795.40	chr3	+	1949	7	NIC	ENSMUSG00000004897.17	novel	377	4	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	1380.35209880185	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87817339	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87817371_87820397_87820475_87820619_87820759_87821147_87821218_87821358_87821545_87821779_87821998_87822208
ES.21795.41	chr3	+	1851	5	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	6769	1	-871	-1	3prime_fragment	FALSE	canonical	3	2720	junction_4	188.179435645875	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87820396	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.42	chr3	+	2264	2	ISM	ENSMUSG00000004897.17	ENSMUST00000160198.2	377	4	3234	-1949	-693	-1	3prime_fragment	FALSE	canonical	3	3212	junction_1	0	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGACTAATTCTTTTCA	NA	False	NA	24	True	AATAAA	-20	NA	87820574	87823438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87820759_87821358
ES.21795.43	chr3	+	1707	4	NIC	ENSMUSG00000004897.17	novel	763	6	NA	NA	-130	-8	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	1282.4993827159	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGATTCTGACTAATT	NA	False	NA	17	True	AATAAA	-13	NA	87821137	87823431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87821218_87821358_87821545_87821779_87821998_87822208
ES.21795.44	chr3	+	6222	4	NIC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	-3042	-229	intron_retention	FALSE	canonical	3	982	junction_1	30.7354301526214	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87823770	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.45	chr3	+	3263	6	NIC	ENSMUSG00000019710.14	novel	1226	6	NA	NA	-31	2	intron_retention	FALSE	canonical	3	77	junction_1	371.280702434156	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826781	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87827013_87827109_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.46	chr3	+	1157	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	-31	213	-31	-213	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGCCTCTCCCAAG	NA	False	NA	52	True	AATAAA	-30	NA	87826781	87830756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.47	chr3	+	3415	4	NIC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	-1	5	intron_retention	FALSE	canonical	3	982	junction_1	30.7354301526214	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	False	NA	21	True	AATAAA	-23	NA	87826811	87830974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.48	chr3	+	1205	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	13	8	13	2	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826825	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.5	chr3	+	1976	7	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-23	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.60593951753	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGCCGCTGATTAC	NA	False	NA	-3	True	AATAGA	-18	NA	87813604	87823411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87813667_87813930_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.50	chr3	+	987	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	15	224	-15	-214	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826827	87830755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.51	chr3	+	3316	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	-2087	5	-14	5	multi-exon	FALSE	canonical	3	982	junction_2	28.5744641244591	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTCTTAAAAGCTTTA	NA	False	NA	21	True	AATAAA	-23	NA	87826828	87830974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.52	chr3	+	2889	6	NNC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	-2	-210	intron_retention	TRUE	non_canonical	0	0	junction_1	402.013233613024	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTCCCAAGTGC	NA	False	NA	55	True	AATAAA	-33	NA	87826840	87830759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827840_87828039_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.53	chr3	+	1312	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	29	-2	-1	2	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826841	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.54	chr3	+	920	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-28	223	-1	-213	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGCCTCTCCCAAG	NA	False	NA	52	True	AATAAA	-30	NA	87826841	87830756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.55	chr3	+	930	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	-1	-229	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	364.828460451697	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87826841	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87826959_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.56	chr3	+	3082	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	-2072	224	1	-214	multi-exon	FALSE	canonical	3	982	junction_2	28.5744641244591	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826843	87830755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.57	chr3	+	1158	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	364.828460451697	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826844	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87826959_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.58	chr3	+	997	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	2	-213	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGCCTCTCCCAAG	NA	False	NA	52	True	AATAAA	-30	NA	87826844	87830756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.59	chr3	+	2948	5	NNC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	2	-229	intron_retention	FALSE	non_canonical	0	0	junction_1	437.719873320826	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87826844	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827840_87828039_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.6	chr3	+	1926	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	-17	336	-17	-336	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	2298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCACTGCTGACCCGT	NA	False	NA	NA	False	AAAAAG	-39	NA	87813610	87823103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.60	chr3	+	1125	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-20	10	7	0	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAGAAGTCTTAAAAG	NA	False	NA	16	True	AATAAA	-18	NA	87826849	87830969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.61	chr3	+	3504	4	NIC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	8	-228	intron_retention	FALSE	canonical	3	982	junction_2	32.3144274623924	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTGTCCACACTACCCC	NA	False	NA	37	True	AATAAA	-15	NA	87826850	87830741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87829356_87829437_87829534_87829694_87830373_87830516
ES.21795.62	chr3	+	2652	6	NNC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	8	-229	intron_retention	TRUE	non_canonical	0	0	junction_1	402.013233613024	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87826850	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827622_87828029_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.66	chr3	+	2326	7	NNC	ENSMUSG00000019710.14	novel	1226	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	455.06336555107	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAACAGAAGTCTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	87826861	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827013_87827109_87828271_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.67	chr3	+	3138	6	NNC	ENSMUSG00000019710.14	novel	1115	6	NA	NA	1	-229	intron_retention	FALSE	non_canonical	0	0	junction_2	486.389309093035	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87826864	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87826959_87827109_87827840_87828039_87829356_87829437_87829534_87829694_87830373_87830516
ES.21795.68	chr3	+	2386	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	53	-1213	2	1213	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTTCTTTGGCTAGG	NA	False	NA	NA	False	NA	NA	NA	87826865	87832192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.69	chr3	+	1089	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	98	2	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87826967	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.7	chr3	+	2824	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	39	junction_2	1357.21438575079	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGACTAATTCTTTT	NA	False	NA	22	True	AATAAA	-18	NA	87813612	87823436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820759_87821147_87821545_87821779
ES.21795.71	chr3	+	2997	5	NNC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	156	1	intron_retention	FALSE	non_canonical	0	0	junction_1	437.719873320826	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGAAGTCTTAAAAGC	NA	False	NA	17	True	AATAAA	-19	NA	87827025	87830970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827840_87828039_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.73	chr3	+	3336	2	NIC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	374	-229	intron_retention	FALSE	canonical	3	982	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTTGTCCACACTACCC	NA	False	NA	36	True	AATAAA	-14	NA	87827243	87830740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87829534_87829694
ES.21795.74	chr3	+	2385	6	NNC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	687	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	402.013233613024	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87827556	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87827840_87828039_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ES.21795.75	chr3	+	2002	4	NIC	ENSMUSG00000019710.14	novel	1234	5	NA	NA	-333	2	intron_retention	FALSE	canonical	3	982	junction_2	32.3144274623924	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTCTTAAAAGCT	NA	False	NA	18	True	AATAAA	-20	NA	87828582	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87829356_87829437_87829534_87829694_87830373_87830516
ES.21795.8	chr3	+	2114	7	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1099.60593951753	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	False	NA	19	True	AATAAA	-15	NA	87813614	87823433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87813785_87813922_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ES.21795.9	chr3	+	4544	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	-4	1939	intron_retention	FALSE	canonical	3	2809	junction_3	164.544489086961	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTGAAGTTATCTGCA	NA	False	NA	NA	False	NA	NA	NA	87813623	87825378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87814022_87820397_87820759_87821358_87821545_87821779
ES.21796.1	chr3	+	2981	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-85	-3	-85	3	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATGTGTGTGCTTT	NA	False	NA	34	True	NA	NA	NA	87837535	87847996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ES.21796.12	chr3	+	2988	2	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	4065	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87841685	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87844171_87847490
ES.21796.2	chr3	+	3141	5	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	172.954293095026	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837581	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87837919_87838336_87838546_87838637_87839583_87845880_87846082_87846544
ES.21796.3	chr3	+	3633	3	NIC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-21	0	intron_retention	FALSE	canonical	3	350	junction_1	11	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837599	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87839583_87845880_87846082_87846544
ES.21796.4	chr3	+	3102	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-18	-191	-18	191	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGTGTAGTCCTGTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	87837602	87848184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ES.21796.5	chr3	+	3203	4	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	165.235858362793	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837611	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87837919_87838336_87839583_87845880_87846082_87846544
ES.21796.6	chr3	+	3463	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-9	-561	-9	561	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGGTTTATATGGGTG	NA	False	NA	NA	False	NA	NA	NA	87837611	87848554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ES.21796.7	chr3	+	1693	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	-8	1208	-8	-1208	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGTCACTGTGTGGT	NA	False	NA	NA	False	GGGGCT	-40	NA	87837612	87846785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ES.21796.8	chr3	+	2806	4	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.507604700454	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837612	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87837919_87838637_87839583_87845975_87846082_87846544
ES.21796.9	chr3	+	4081	2	NIC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	-6	0	intron_retention	FALSE	canonical	3	350	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837614	87847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87839583_87845880
ES.21797.1	chr3	-	177	1	Intergenic	novelGene_18029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACATTA	4283	False	NA	NA	False	NA	NA	NA	87828032	87827855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87827900_87828000
ES.21798.1	chr3	-	5018	6	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-54	0	-37	0	intron_retention	FALSE	canonical	3	33	junction_5	33.4388995034227	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9406	False	NA	-2	True	NA	NA	NA	87837488	87829907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ES.21798.11	chr3	-	2738	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	1	-11	intron_retention	FALSE	canonical	3	9	junction_6	43.8233932497059	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9450	False	NA	-13	True	NA	NA	NA	87837444	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869_87834968_87835230_87835356_87837162
ES.21798.12	chr3	-	5209	5	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	1	-11	intron_retention	FALSE	canonical	3	26	junction_2	39.7429238984753	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9444	False	NA	-13	True	NA	NA	NA	87837450	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361
ES.21798.13	chr3	-	1668	2	ISM	ENSMUSG00000004896.17	ENSMUST00000160068.2	823	3	251	-733	251	-21	intron_retention	FALSE	canonical	3	119	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATAAAAAAAAAAAAAT	NA	False	NA	NA	False	AGTAAA	-35	NA	87832331	87830232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650
ES.21798.14	chr3	-	1608	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160143.2	1568	7	436	-476	-3	9	multi-exon	FALSE	canonical	2	12	junction_2	33.5596483890997	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCATGGCCTCCATCAC	9440	False	NA	NA	False	AATAAA	-27	NA	87837454	87830613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87831220_87831650_87831836_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.15	chr3	-	4119	6	NIC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	1	9	intron_retention	FALSE	canonical	3	13	junction_2	40.6516912317311	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCATGGCCTCCATCAC	9444	False	NA	NA	False	AATAAA	-27	NA	87837450	87830613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869
ES.21798.16	chr3	-	2389	5	NNC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	115	-1	intron_retention	FALSE	canonical	3	9	junction_4	46.4462054424255	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCTGGATCCCCATGG	NA	False	NA	NA	False	AATAAA	-17	NA	87835450	87830623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87832739_87834037_87834425_87834869_87834968_87835230
ES.21798.17	chr3	-	2084	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	32.1666578548506	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCTGGATCCCCATGG	9444	False	NA	NA	False	AATAAA	-17	NA	87837450	87830623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.18	chr3	-	3939	7	NIC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	13	junction_2	42.3582603776669	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCTGGATCCCCATGG	9406	False	NA	NA	False	AATAAA	-17	NA	87837488	87830623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ES.21798.2	chr3	-	2812	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	26	junction_2	32.1666578548506	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9432	False	NA	-2	True	NA	NA	NA	87837462	87829907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.20	chr3	-	3963	6	ISM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-16	1057	1	0	intron_retention	FALSE	canonical	3	63	junction_5	23.591523901605	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9444	False	NA	-22	True	TATAAA	-27	NA	87837450	87830964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230
ES.21798.21	chr3	-	3961	6	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-54	1057	-37	0	intron_retention	FALSE	canonical	3	33	junction_5	33.4388995034227	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9406	False	NA	-22	True	TATAAA	-27	NA	87837488	87830964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ES.21798.22	chr3	-	4341	4	ISM	ENSMUSG00000004896.17	ENSMUST00000168070.2	3254	5	-812	342	-29	0	intron_retention	FALSE	canonical	3	80	junction_3	20.237478982214	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9414	False	NA	-22	True	TATAAA	-27	NA	87837480	87830964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834425_87834869
ES.21798.23	chr3	-	4163	5	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-48	1057	-31	0	intron_retention	FALSE	canonical	3	80	junction_4	17.8115131305569	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9412	False	NA	-22	True	TATAAA	-27	NA	87837482	87830964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869
ES.21798.24	chr3	-	2323	6	NIC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	72	junction_5	21.0770016843004	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCATGTAATTTTTATTT	9444	False	NA	-23	True	TATAAA	-26	NA	87837450	87830965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835356_87837162
ES.21798.25	chr3	-	1534	8	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	44.7523799389941	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCATGTAATTTTTATT	9414	False	NA	-24	True	TATAAA	-25	NA	87837480	87830966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837354
ES.21798.26	chr3	-	3695	7	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	-74	-2	intron_retention	FALSE	canonical	1	1	junction_6	46.7502228158683	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9369	False	NA	-25	True	TATAAA	-24	NA	87837525	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835136_87835230
ES.21798.27	chr3	-	1740	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	32.1666578548506	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9444	False	NA	-25	True	TATAAA	-24	NA	87837450	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.28	chr3	-	1696	8	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	34.3926902532667	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9443	False	NA	-25	True	TATAAA	-24	NA	87837451	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ES.21798.29	chr3	-	3866	6	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	9	junction_5	42.1283752357007	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9443	False	NA	-25	True	TATAAA	-24	NA	87837451	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87834968_87835230
ES.21798.3	chr3	-	3229	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-32	0	-15	0	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9428	False	NA	-2	True	NA	NA	NA	87837466	87829907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.30	chr3	-	3464	7	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	9	junction_6	44.6744396221772	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9432	False	NA	-25	True	TATAAA	-24	NA	87837462	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87834968_87835230
ES.21798.31	chr3	-	1755	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.8453817992592	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9407	False	NA	-25	True	TATAAA	-24	NA	87837487	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831793_87832248_87832739_87834037_87834182_87834340_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.32	chr3	-	2202	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-65	1060	-48	-2	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9395	False	NA	-25	True	TATAAA	-24	NA	87837499	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.33	chr3	-	3758	6	NIC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	13	junction_2	40.6516912317311	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9451	False	NA	-25	True	TATAAA	-24	NA	87837443	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869
ES.21798.34	chr3	-	5939	4	NNC	ENSMUSG00000004896.17	novel	3565	5	NA	NA	29	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	49.5333781964804	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	8899	False	NA	-25	True	TATAAA	-24	NA	87837995	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87833582_87833794_87834425_87834869
ES.21798.35	chr3	-	3640	3	ISM	ENSMUSG00000004896.17	ENSMUST00000168070.2	3254	5	331	345	331	-2	intron_retention	FALSE	canonical	3	119	junction_1	3.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	NA	False	NA	-25	True	TATAAA	-24	NA	87836337	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037
ES.21798.36	chr3	-	1805	8	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-54	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	39.2854545445959	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9389	False	NA	-25	True	TATAAA	-24	NA	87837505	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ES.21798.37	chr3	-	4566	4	ISM	ENSMUSG00000004896.17	ENSMUST00000159831.8	2751	5	-6	-2	-6	-2	intron_retention	FALSE	canonical	3	80	junction_3	18.8030730348939	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9437	False	NA	-25	True	TATAAA	-24	NA	87837457	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87832739_87834037_87834182_87834361_87834425_87834869
ES.21798.38	chr3	-	6057	2	ISM	ENSMUSG00000004896.17	ENSMUST00000160143.2	1568	7	435	-122	-4	-2	intron_retention	FALSE	canonical	3	119	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9439	False	NA	-25	True	TATAAA	-24	NA	87837455	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650
ES.21798.39	chr3	-	2187	7	NNC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	1	-2	intron_retention	FALSE	canonical	2	8	junction_3	39.0512483795333	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9444	False	NA	-25	True	TATAAA	-24	NA	87837450	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834327_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.4	chr3	-	2765	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	26	junction_2	36.3823235842319	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTAACAGACCTCT	9432	False	NA	-9	True	NA	NA	NA	87837462	87829914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ES.21798.40	chr3	-	3562	7	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	26	junction_2	39.1553175046364	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9389	False	NA	-25	True	TATAAA	-24	NA	87837505	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ES.21798.41	chr3	-	1544	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	47.5145520136855	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9400	False	NA	-25	True	TATAAA	-24	NA	87837494	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832198_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837412
ES.21798.43	chr3	-	3366	5	NNC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	14	-2	intron_retention	FALSE	canonical	2	8	junction_3	46.8474919285974	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9941	False	NA	-25	True	TATAAA	-24	NA	87836654	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834327_87834425_87834869
ES.21798.44	chr3	-	3496	6	NIC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	-43	-2	intron_retention	FALSE	canonical	3	63	junction_4	20.3469899493758	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATGTAATTTTTAT	9400	False	NA	-25	True	TATAAA	-24	NA	87837494	87830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.46	chr3	-	3591	7	ISM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	-49	757	-49	1	intron_retention	FALSE	canonical	3	36	junction_2	31.5317300508551	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACCATGTAATTTTTA	9394	False	NA	-26	True	TATAAA	-23	NA	87837500	87830968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230
ES.21798.47	chr3	-	1692	8	NIC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_7	40.8111629386883	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATACCATGTAATTTTT	8897	False	NA	-27	True	TATAAA	-22	NA	87837997	87830969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837750
ES.21798.48	chr3	-	3639	5	NIC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	-20	0	intron_retention	FALSE	canonical	3	72	junction_4	18.3711730708738	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATACCATGTAATTTTT	9423	False	NA	-27	True	TATAAA	-22	NA	87837471	87830969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87834182_87834361_87834425_87834869_87835356_87837162
ES.21798.49	chr3	-	2150	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-55	1062	-38	0	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATACCATGTAATTTTT	9405	False	NA	-27	True	TATAAA	-22	NA	87837489	87830969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ES.21798.5	chr3	-	3013	6	NIC	ENSMUSG00000004896.17	novel	3157	7	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_4	45.4110118803799	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTAACAGACCTCT	9444	False	NA	-9	True	NA	NA	NA	87837450	87829914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87835230_87835356_87837162
ES.21798.50	chr3	-	3628	5	NIC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	63	junction_3	21.3600093632938	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAATACCATGTAATTT	9444	False	NA	-29	True	TATAAA	-20	NA	87837450	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87831220_87831650_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.51	chr3	-	4576	4	ISM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-23	1064	-6	-2	intron_retention	FALSE	canonical	3	101	junction_3	10.5303793326209	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAATACCATGTAATTT	9437	False	NA	-29	True	TATAAA	-20	NA	87837457	87830971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361
ES.21798.52	chr3	-	1680	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-48	-7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	39.7810333229907	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTATAAATACCATGT	9395	False	NA	-34	True	TATAAA	-15	NA	87837499	87830976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87834968_87835230_87835356_87837162
ES.21798.53	chr3	-	1813	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-37	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.3352933905729	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTCTATAAATACCAT	9406	False	NA	-36	True	TATAAA	-13	NA	87837488	87830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832202_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ES.21798.54	chr3	-	1471	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-36	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	44.304143630784	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTCTATAAATACCAT	9407	False	NA	-36	True	TATAAA	-13	NA	87837487	87830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837412
ES.21798.55	chr3	-	4022	6	NNC	ENSMUSG00000004896.17	novel	3197	7	NA	NA	1	-9	intron_retention	FALSE	canonical	1	1	junction_5	45.1069839381885	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTCTATAAATACCAT	9444	False	NA	-36	True	TATAAA	-13	NA	87837450	87830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835136_87835230
ES.21798.6	chr3	-	2733	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	-38	-11	intron_retention	FALSE	canonical	3	9	junction_6	41.3950603382597	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9405	False	NA	-13	True	NA	NA	NA	87837489	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87834968_87835230_87835356_87837162
ES.21798.7	chr3	-	2941	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	205	11	205	-11	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9665	False	NA	-13	True	NA	NA	NA	87837229	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ES.21798.8	chr3	-	4819	6	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	-54	-11	intron_retention	FALSE	canonical	3	26	junction_2	35.9254784240934	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9389	False	NA	-13	True	NA	NA	NA	87837505	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869
ES.21798.9	chr3	-	7215	2	NNC	ENSMUSG00000004896.17	novel	741	2	NA	NA	87	-11	intron_retention	TRUE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAATTAACAGAC	9547	False	NA	-13	True	NA	NA	NA	87837347	87829918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87833582_87833795
ES.21799.1	chr3	-	173	1	Intergenic	novelGene_18030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATTATTTAA	8508	False	NA	NA	False	NA	NA	NA	87840607	87840434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87840400_87840600
ES.218.1	chr1	+	176	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTTTTATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	31865266	31865442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_31865300_31865400
ES.2180.1	chr1	+	2539	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	9	1166	9	-1166	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660697	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.10	chr1	+	3164	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	39	470	39	-470	multi-exon	FALSE	canonical	3	10	junction_1	60.2136820000239	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTTACTCATTTATT	NA	False	NA	12	True	AATAAA	-12	NA	190660727	190678689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.11	chr1	+	2406	9	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	39	-1166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.2929695937866	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660727	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660853_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.12	chr1	+	2365	10	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	40	-1166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.4365074238799	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660728	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660745_190660887_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.13	chr1	+	2871	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	48	-469	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	62.1285697861577	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	190660736	190678690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.14	chr1	+	2470	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	48	-1695	intron_retention	FALSE	canonical	3	14	junction_1	67.0615389027123	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATGTTTAAAGAACTT	NA	False	NA	NA	False	AAGAAA	-41	NA	190660736	190677464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.16	chr1	+	3323	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	50	-1166	intron_retention	FALSE	canonical	3	110	junction_1	33.9861916738224	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660738	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.17	chr1	+	2505	9	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	50	-1166	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	63.9687423668779	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660738	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671361_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.18	chr1	+	2365	8	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	50	-1166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.2119926802812	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660738	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675030_190675085_190675975_190676138_190677136
ES.2180.19	chr1	+	9985	6	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	53	-469	intron_retention	FALSE	canonical	3	110	junction_1	37.991578014081	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	190660741	190678690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190669898_190671283_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.2	chr1	+	2206	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	16	-1166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	62.1285697861577	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660704	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.20	chr1	+	2341	8	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	57	-1196	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	83.0537077278729	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190660745	190677963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671361_190673070_190673493_190675026_190675085_190675973_190676138_190677136
ES.2180.21	chr1	+	4511	6	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	79	-461	intron_retention	FALSE	canonical	2	6	junction_3	78.0589520811034	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190660767	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190673070_190675085_190675973_190676138_190677136
ES.2180.23	chr1	+	2065	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	87	-1166	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	84.4901374915045	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660775	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190669640_190669898_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.25	chr1	+	1921	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	98	1695	98	-1695	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATGTTTAAAGAACTT	NA	False	NA	NA	False	AAGAAA	-41	NA	190660786	190677464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.26	chr1	+	3525	6	NIC	ENSMUSG00000026634.17	novel	3261	7	NA	NA	104	-1166	intron_retention	FALSE	canonical	3	14	junction_1	73.4618268218263	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660792	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190675085_190675973_190676138_190677136
ES.2180.27	chr1	+	4430	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	108	-1	intron_retention	FALSE	canonical	3	110	junction_1	33.9861916738224	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	False	NA	15	True	AATAAA	-17	NA	190660796	190679158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.28	chr1	+	2114	8	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	115	-1166	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	81.6760649874658	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660803	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190669640_190669898_190671283_190671361_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.29	chr1	+	4536	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	124	-461	intron_retention	FALSE	canonical	3	110	junction_1	35.8685873091701	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190660812	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190675085_190675973_190676138_190677136
ES.2180.3	chr1	+	3107	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	19	-461	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	64.6948882944284	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190660707	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675973_190676138_190677136
ES.2180.30	chr1	+	4427	9	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	156	-2	intron_retention	FALSE	canonical	1	1	junction_3	79.227520471109	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTGTGGACAGAGAAG	NA	False	NA	14	True	AATAAA	-16	NA	190660844	190679157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190665063_190665390_190666142_190666189_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.31	chr1	+	6990	6	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	-140	-462	intron_retention	FALSE	canonical	3	110	junction_1	37.7920626587118	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTATTCCAGTTGT	NA	False	NA	20	True	AATAAA	-20	NA	190660878	190678697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.32	chr1	+	3072	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-3	-461	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190661015	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.33	chr1	+	3125	8	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-3	-466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.5886429157083	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	190661015	190678693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661287_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675973_190676138_190677136
ES.2180.34	chr1	+	2556	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	-1166	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	61.1349685123007	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661021	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.35	chr1	+	2356	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	8	-1166	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661026	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.36	chr1	+	4702	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-12	-466	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.9840009446844	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	190661030	190678693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190662752_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.37	chr1	+	3249	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-9	-461	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	61.1349685123007	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190661033	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.38	chr1	+	5161	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.9840009446844	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTTGTGGACAGAGA	NA	False	NA	12	True	AATAAA	-14	NA	190661033	190679155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190662752_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.39	chr1	+	6184	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	-9	-1166	intron_retention	FALSE	canonical	3	16	junction_4	67.3795221116921	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661033	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675973_190676138_190677136
ES.2180.4	chr1	+	4054	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	23	-462	intron_retention	FALSE	canonical	3	110	junction_1	33.9861916738224	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTATTCCAGTTGT	NA	False	NA	20	True	AATAAA	-20	NA	190660711	190678697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.40	chr1	+	3848	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-9	-1166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.2929695937866	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661033	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190662601_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.41	chr1	+	3539	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-8	25	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGGGCCTTGAGTTT	NA	False	NA	41	True	AATAAA	-43	NA	190661034	190679184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.42	chr1	+	2690	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-8	-1166	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661034	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.44	chr1	+	3168	8	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-3	-1166	intron_retention	FALSE	canonical	3	57	junction_1	49.3310350632152	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661039	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.45	chr1	+	4848	7	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-1	-1196	intron_retention	FALSE	canonical	3	57	junction_1	52.6795870227633	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190661046	190677963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.46	chr1	+	2149	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-1	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATGTTTAAAGAACTT	NA	False	NA	NA	False	AAGAAA	-41	NA	190661046	190677464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.47	chr1	+	7123	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	-1	-1166	intron_retention	FALSE	canonical	3	146	junction_3	24.6373699895098	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661046	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.48	chr1	+	3796	7	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-1	-461	intron_retention	FALSE	canonical	2	6	junction_3	78.1780375524709	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTATTCCAGTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	190661046	190678698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.49	chr1	+	6472	9	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	-1	-1194	intron_retention	FALSE	canonical	0	0	junction_3	81.9797993410572	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190661046	190677965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190665390_190669640_190669898_190671283_190671354_190672398_190672601_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.5	chr1	+	2435	9	NNC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	23	-1196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.6010348939042	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190660711	190677963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677196
ES.2180.50	chr1	+	3909	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	1	-462	intron_retention	FALSE	canonical	1	1	junction_3	82.559732164052	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATTTATTCCAGTTGT	NA	False	NA	20	True	AATAAA	-20	NA	190661048	190678697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661102_190665063_190665390_190666142_190666189_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.51	chr1	+	3215	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	0	-469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.2929695937866	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	190661049	190678690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661287_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.52	chr1	+	4903	7	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	57	junction_1	53.0955637401929	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	False	NA	15	True	AATAAA	-17	NA	190661051	190679158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190675085_190675973_190676138_190677136
ES.2180.53	chr1	+	3218	10	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.1301609514401	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	190661051	190678690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661102_190662561_190662752_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.54	chr1	+	3376	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	2	-463	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATTTATTCCAGTTG	NA	False	NA	19	True	AATAAA	-19	NA	190661051	190678696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.55	chr1	+	1888	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	-1803	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	61.1349685123007	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTCACTTTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	190661052	190677356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.56	chr1	+	1802	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	-1694	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATGTTTAAAGAACTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	190661052	190677465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.57	chr1	+	3838	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	False	NA	16	True	AATAAA	-18	NA	190661052	190679159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.58	chr1	+	3679	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.2929695937866	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTGTGGACAGAGAAG	NA	False	NA	14	True	AATAAA	-16	NA	190661052	190679157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661287_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.59	chr1	+	3289	10	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	4	-469	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	74.6086083802965	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTCATTTATTC	NA	False	NA	13	True	AATAAA	-13	NA	190661053	190678690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661117_190661195_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.6	chr1	+	3229	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	26	459	26	-459	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATTCCAGTTGTTTT	NA	False	NA	23	True	AATAAA	-23	NA	190660714	190678700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.60	chr1	+	3971	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.5871745796196	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTGTGGACAGAGAAG	NA	False	NA	14	True	AATAAA	-16	NA	190661056	190679157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190675026_190675085_190675246_190675513_190675973_190676138_190677136
ES.2180.61	chr1	+	1052	3	NNC	ENSMUSG00000026634.17	novel	1135	3	NA	NA	12	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.5	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATTTGTGCAAAAAATA	NA	False	NA	NA	False	AATAAA	-21	NA	190661061	190670141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661287_190665063_190665390_190669640
ES.2180.62	chr1	+	3933	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	20	-1196	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.9840009446844	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190661069	190677963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190662752_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.63	chr1	+	4023	8	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	20	-466	intron_retention	FALSE	non_canonical	0	0	junction_1	67.6482498981734	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTCATTTATTCCAG	NA	False	NA	16	True	AATAAA	-16	NA	190661069	190678693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661287_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.64	chr1	+	2497	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	38	-1166	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	79.66639426383	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190661087	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671361_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.65	chr1	+	8005	2	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	-459	-1166	intron_retention	FALSE	canonical	3	208	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190668989	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190676138_190677136
ES.2180.66	chr1	+	4060	5	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	1459	-1	intron_retention	FALSE	canonical	0	0	junction_2	85.5785457927394	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	False	NA	15	True	AATAAA	-17	NA	190670907	190679158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190671354_190673070_190674445_190675030_190675085_190675973_190676138_190677136
ES.2180.67	chr1	+	2480	1	NIC	ENSMUSG00000026634.17	novel	3562	10	NA	NA	6065	-1166	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190675513	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190675500_190678000
ES.2180.7	chr1	+	3686	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	27	1	27	-1	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	False	NA	15	True	AATAAA	-17	NA	190660715	190679158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.8	chr1	+	5059	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	31	-1166	intron_retention	FALSE	canonical	3	110	junction_1	34.9141805001922	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660719	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190674445_190675026_190675085_190675973_190676138_190677136
ES.2180.9	chr1	+	2469	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	38	1166	38	-1166	multi-exon	FALSE	canonical	3	10	junction_1	60.2136820000239	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660726	190677993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ES.21800.1	chr3	+	901	5	NNC	ENSMUSG00000004885.6	novel	658	2	NA	NA	-3597	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.3354165483089	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTCTGTGGCTCCC	5234	False	NA	4	True	ATTAAA	-15	NA	87852375	87860679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87852460_87858856_87858992_87859421_87859601_87859784_87859902_87860293
ES.21800.2	chr3	+	897	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	30	4	30	-4	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTCTGTGGCTCCC	8861	False	NA	4	True	ATTAAA	-15	NA	87856002	87860679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ES.21801.1	chr3	+	191	1	Intergenic	novelGene_18031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACTGGGGTA	6751	False	NA	NA	False	NA	NA	NA	87864759	87864950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87864800_87865000
ES.21802.1	chr3	-	181	1	Intergenic	novelGene_18032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCACACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	87872544	87872363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87872400_87872500
ES.21803.1	chr3	+	6263	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	-137	0	-122	0	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGCTTTCTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	87878262	87887758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ES.21803.2	chr3	+	1181	2	NNC	ENSMUSG00000004891.17	novel	1311	2	NA	NA	31	-704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTTTGCCTCCTCTTC	NA	False	NA	NA	False	GATAAA	-18	NA	87878466	87879994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87879296_87879642
ES.21803.3	chr3	+	6170	5	NNC	ENSMUSG00000004891.17	novel	5958	5	NA	NA	46	-4	intron_retention	FALSE	canonical	0	0	junction_1	11.7977752139969	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGTCTGGCTGCTTTCT	NA	False	NA	6	True	AATAAA	-16	NA	87878481	87887754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87879296_87880067_87880198_87880298_87880424_87882108_87882183_87882727
ES.21803.4	chr3	+	5285	3	NNC	ENSMUSG00000004891.17	novel	6126	4	NA	NA	2662	-4	intron_retention	FALSE	canonical	0	0	junction_1	11	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGTCTGGCTGCTTTCT	NA	False	NA	6	True	AATAAA	-16	NA	87881097	87887754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87881282_87882108_87882183_87882727
ES.21804.1	chr3	-	3333	14	FSM	ENSMUSG00000004892.14	ENSMUST00000090971.11	3141	14	-196	4	-196	-4	multi-exon	FALSE	canonical	0	0	junction_2	0.634323942402717	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGATGCTTCTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	87907733	87894841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87895275_87895578_87895770_87895999_87896145_87896474_87896558_87897446_87897606_87897981_87898090_87900361_87900950_87901418_87901641_87902716_87903011_87903424_87903553_87903845_87904021_87904291_87904664_87905051_87905163_87907409
ES.21805.1	chr3	-	167	1	Intergenic	novelGene_18033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAACAAATGAAGT	NA	False	NA	NA	False	NA	NA	NA	87937064	87936897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_87936900_87937100
ES.21806.1	chr3	+	2544	3	Genic_Genomic	ENSMUSG00000105843.2	novel	2273	1	NA	NA	-48	1076	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTGAGGCTCTTCT	5962	False	NA	NA	False	NA	NA	NA	87938136	87941533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_87938344_87939089_87939469_87939575
ES.21807.1	chr3	+	1707	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	-20	-57	-20	54	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTCACAGAAATCCAGG	1699	False	NA	93	True	NA	NA	NA	87950394	87963354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21807.12	chr3	+	6197	7	ISM	ENSMUSG00000028069.17	ENSMUST00000193398.2	2210	8	3454	-73	3454	56	3prime_fragment	FALSE	canonical	3	164	junction_4	17.9760643325754	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCACAGAAATCCAGGCA	797	False	NA	95	True	NA	NA	NA	87953888	87963356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21807.4	chr3	+	1191	9	NNC	ENSMUSG00000028069.17	novel	1630	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	66.8644851546768	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTTTGTTTTGTTTT	1720	False	NA	36	True	TTTAAA	-25	NA	87950415	87963297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264_87962769_87963206
ES.21807.5	chr3	+	1750	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	8	10	7	-7	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAAATGTCTTTGTT	1727	False	NA	29	True	TTTAAA	-18	NA	87950422	87963290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21807.7	chr3	+	1610	8	NIC	ENSMUSG00000028069.17	novel	1768	9	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	86.0073561163372	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGACTTACATGAA	1728	False	NA	18	True	TTTAAA	-7	NA	87950423	87963279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87950487_87950773_87950909_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21807.8	chr3	+	2087	6	NIC	ENSMUSG00000028069.17	novel	1630	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	156	junction_1	20.7903823918657	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGACTTACATGAAATGT	1729	False	NA	22	True	TTTAAA	-11	NA	87950424	87963283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87950487_87958468_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21807.9	chr3	+	1994	7	NIC	ENSMUSG00000028069.17	novel	959	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	156	junction_1	21.3775583264319	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATGTCTTTGTTTTGT	1735	False	NA	33	True	TTTAAA	-22	NA	87950430	87963294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87950487_87958468_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ES.21808.1	chr3	-	959	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-53	2	-53	-2	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTCTTCTGGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	87965855	87963828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.11	chr3	-	1520	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	839	junction_2	37.6920084368026	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGGAGTCTTCTGGC	NA	False	NA	-9	True	AATAAA	-20	NA	87965829	87963831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87964084_87964292_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.2	chr3	-	1731	4	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	839	junction_1	43.5150037981793	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965829	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.3	chr3	-	947	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	353.312099990929	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965817	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87964084_87964292_87964441_87965003_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.4	chr3	-	1060	7	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	405.706653739976	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965784	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87964084_87964292_87964441_87964605_87964779_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.5	chr3	-	1360	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	336.194586512038	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965832	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87964084_87964292_87964441_87964605_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.6	chr3	-	806	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	382.924519324631	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965817	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_87964084_87964292_87964441_87965227_87965339_87965436_87965546_87965633
ES.21808.7	chr3	-	946	6	NNC	ENSMUSG00000028070.8	novel	908	6	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	327.592796013588	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965829	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_87964084_87964278_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ES.21808.8	chr3	-	1983	1	Genic_Genomic	ENSMUSG00000028070.8	novel	NA	NA	NA	NA	-10	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	False	NA	-7	True	AATAAA	-22	NA	87965812	87963829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_87963800_87965800
ES.21808.9	chr3	-	1766	2	ISM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	-3	4	-3	-4	intron_retention	FALSE	canonical	3	878	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGGAGTCTTCTGGCC	NA	False	NA	-8	True	AATAAA	-21	NA	87965805	87963830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_87964084_87964292
ES.21809.1	chr3	+	155	1	Intergenic	novelGene_18034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAAATTT	9741	False	NA	NA	False	NA	NA	NA	87986952	87987107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_87987000_87987100
ES.2181.2	chr1	-	3785	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	0	112	0	-110	multi-exon	FALSE	canonical	0	0	junction_7	1.82946406783796	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACTTCACGATGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	190711493	190679954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
ES.21810.1	chr3	+	5754	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	3	-1	3	1	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCGTTGTTGCTATAGT	NA	False	NA	20	True	AATAAA	-21	NA	87989280	88028356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.10	chr3	+	5823	39	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	54.7279091901137	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989318	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88006427_88006536_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.11	chr3	+	7813	38	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_15	65.2125591205885	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989319	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88006422_88006536_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023214_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.12	chr3	+	5809	39	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.1106165398434	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989319	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87992335_87992431_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.13	chr3	+	6195	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-1	1	intron_retention	FALSE	canonical	3	183	junction_11	24.2355340587145	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	87989333	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.14	chr3	+	5861	39	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.3120836056443	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989334	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87992369_87992534_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.15	chr3	+	5617	38	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	55.3625806810339	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989335	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997518_87997624_87998042_87998122_87998782_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.18	chr3	+	7374	36	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	3	0	intron_retention	FALSE	canonical	2	3	junction_7	44.2811610562528	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGCGTTGTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	87989337	88028351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997518_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.19	chr3	+	5528	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	44.0248509367153	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989337	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.2	chr3	+	6120	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	11	0	intron_retention	FALSE	canonical	3	183	junction_11	24.306238085655	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989288	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88025092_88027469
ES.21810.21	chr3	+	8968	35	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	3	1	intron_retention	FALSE	canonical	2	4	junction_9	44.4978616180746	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	87989337	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998782_87998942_87999718_87999807_88001890_88002055_88004208_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.22	chr3	+	5483	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	41.3001285383466	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989337	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.23	chr3	+	4131	27	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	50.473380411634	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	87989342	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999800_88014964_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.25	chr3	+	6340	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	13	-2	intron_retention	FALSE	canonical	3	183	junction_10	23.6459709981308	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989347	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.26	chr3	+	10651	36	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	14	-2	intron_retention	FALSE	canonical	3	183	junction_11	23.5899321312967	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989348	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88011451_88011607_88011680_88011772_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.27	chr3	+	5672	38	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	43.6021424072049	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989348	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016267_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.3	chr3	+	5942	39	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.5556299859345	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989292	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998782_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88010926_88011135_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.33	chr3	+	5675	38	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	55.7986833234279	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989350	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017447_88019619_88019695_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.35	chr3	+	8654	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	18	1	intron_retention	FALSE	canonical	3	183	junction_11	23.4277191525628	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	87989352	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.36	chr3	+	6043	35	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	1930	0	intron_retention	FALSE	canonical	2	3	junction_6	44.664619115045	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87991264	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997518_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016804_88017301_88017443_88019610_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.38	chr3	+	5667	36	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	90	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	44.3549136775954	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	87993546	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024768_88025092_88027469
ES.21810.39	chr3	+	5390	35	ISM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	5304	2	1125	-2	3prime_fragment	FALSE	canonical	3	183	junction_8	24.3368090927428	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87994581	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.4	chr3	+	5714	38	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	43.5615648738493	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGCGTTGTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	87989303	88028351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999730_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.40	chr3	+	5335	35	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	1172	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	44.8064271835528	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGCGTTGTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	87994628	88028351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024988_88025092_88027469
ES.21810.41	chr3	+	5478	35	NNC	ENSMUSG00000028068.15	novel	4512	2	NA	NA	1732	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.8266653990217	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87995188	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87995358_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.43	chr3	+	8778	30	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	3545	-2	intron_retention	FALSE	canonical	2	3	junction_2	61.205177246372	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87997001	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_87997036_87997123_87997238_87997518_87997624_87998042_87998122_87998782_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88020138_88020406_88020540_88020653_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.44	chr3	+	177	1	Intergenic	novelGene_18035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTCGTAGCGATA	NA	False	NA	NA	False	NA	NA	NA	88003239	88003416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88003200_88003400
ES.21810.45	chr3	+	5947	24	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-8079	-2	intron_retention	FALSE	canonical	3	186	junction_9	25.5637384961183	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	88004369	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.46	chr3	+	5312	27	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-7719	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.145921682255	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	88004729	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011034_88011135_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88020850_88020950_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.47	chr3	+	4336	25	ISM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	16227	4	-6944	0	3prime_fragment	FALSE	canonical	3	186	junction_9	25.0529647280849	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGCGTTGTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	88005504	88028351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.49	chr3	+	5447	24	NNC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-5929	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.5324923026804	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	88006519	88028355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011034_88011135_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.50	chr3	+	6045	15	NIC	ENSMUSG00000028068.15	novel	3263	17	NA	NA	-65	-2	intron_retention	FALSE	canonical	3	207	junction_7	24.4823968414459	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	88012383	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.51	chr3	+	3359	14	NNC	ENSMUSG00000028068.15	novel	3263	17	NA	NA	1299	-2	intron_retention	FALSE	canonical	0	0	junction_7	69.2915118139838	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	88015721	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88015821_88016113_88016278_88016578_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021242_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.52	chr3	+	3567	13	NIC	ENSMUSG00000028068.15	novel	3263	17	NA	NA	1751	-2	intron_retention	FALSE	canonical	3	207	junction_5	25.791229129299	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	88016173	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.53	chr3	+	5773	8	NIC	ENSMUSG00000028068.15	novel	3263	17	NA	NA	2598	1	intron_retention	FALSE	canonical	3	226	junction_2	28.1410441765571	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	88017020	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88017443_88019610_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024608_88024982
ES.21810.54	chr3	+	6545	7	NIC	ENSMUSG00000028068.15	novel	3263	17	NA	NA	2844	1	intron_retention	FALSE	canonical	3	207	junction_2	32.7346231925091	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGCGTTGTTGCTA	NA	False	NA	16	True	AATAAA	-17	NA	88017266	88028352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88017443_88019610_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88023424_88024086
ES.21810.6	chr3	+	5562	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	30	164	-19	-160	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGTCTTGCCATCTT	NA	False	NA	NA	False	NA	NA	NA	87989307	88028191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ES.21810.8	chr3	+	8245	34	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	183	junction_11	25.1224366408433	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTGCGTTGTTGCTAT	NA	False	NA	17	True	AATAAA	-18	NA	87989310	88028353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88025092_88027469
ES.21811.1	chr3	+	176	1	Intergenic	novelGene_18036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAGTAAATGCT	1992	False	NA	NA	False	NA	NA	NA	88032870	88033046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88032900_88033000
ES.21812.1	chr3	+	178	1	Intergenic	novelGene_18037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTCTCT	7042	False	NA	NA	False	NA	NA	NA	88037920	88038098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88037900_88038100
ES.21813.1	chr3	+	220	1	Intergenic	novelGene_18038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAAGGCAGAG	932	False	NA	NA	False	NA	NA	NA	88044072	88044292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88044100_88044300
ES.21814.1	chr3	-	2340	1	Intergenic	novelGene_18039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTCTGAGGTAG	NA	False	NA	NA	False	AATAAA	-8	NA	88047789	88045449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88045400_88047800
ES.21815.1	chr3	+	3354	12	NNC	ENSMUSG00000001419.18	novel	1791	12	NA	NA	-413	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	49.5236816212437	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTTCTGCTGTGTTCT	6125	False	NA	29	True	NA	NA	NA	88049265	88077244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.10	chr3	+	5391	11	FSM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	-224	-3400	-24	-31	multi-exon	FALSE	canonical	1	1	junction_4	60.4383983904273	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	6514	False	NA	-14	True	NA	NA	NA	88049654	88079362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065663_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.11	chr3	+	6308	7	NIC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-23	-8	intron_retention	FALSE	canonical	3	138	junction_4	10.3064165558269	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTGTACAGATGAGATT	6515	False	NA	14	True	NA	NA	NA	88049655	88077229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
ES.21815.12	chr3	+	5710	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-64	-2158	-20	2	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGGTTTTGATTTC	6518	False	NA	19	True	ATTAAA	-31	NA	88049658	88079395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.13	chr3	+	3572	11	ISM	ENSMUSG00000001419.18	ENSMUST00000107559.3	1791	12	-218	-1276	-18	1	intron_retention	FALSE	canonical	3	4	junction_7	59.7916382113753	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGATTCTTCTGCTG	6520	False	NA	23	True	NA	NA	NA	88049660	88077238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88069087_88069109_88070264_88070395_88074821_88075042_88075344
ES.21815.14	chr3	+	3197	11	NNC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.4494897933886	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGATTCTTCTGCTGT	6522	False	NA	24	True	NA	NA	NA	88049662	88077239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88062984_88063170_88063628_88063767_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.15	chr3	+	3542	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-60	6	-16	-6	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTACAGATGAGATTCT	6522	False	NA	16	True	NA	NA	NA	88049662	88077231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.16	chr3	+	5108	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	42.4185494015688	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCAGTTTGGGTTTTGA	6522	False	NA	15	True	ATTAAA	-27	NA	88049662	88079391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.17	chr3	+	3546	10	ISM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	-214	-1278	-14	3	intron_retention	FALSE	canonical	1	1	junction_4	60.1184016938426	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGATTCTTCTGCTGTG	6524	False	NA	25	True	NA	NA	NA	88049664	88077240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065663_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.18	chr3	+	2960	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-14	8	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	42.4185494015688	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTGCTGTGTTCTT	6524	False	NA	30	True	NA	NA	NA	88049664	88077245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.19	chr3	+	3257	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-10	2154	-10	2	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGATTCTTCTGCTGT	6528	False	NA	24	True	NA	NA	NA	88049668	88077239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.2	chr3	+	5508	12	NNC	ENSMUSG00000001419.18	novel	1791	12	NA	NA	-413	5	intron_retention	FALSE	canonical	3	8	junction_1	49.5236816212437	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGTTTTGATTTCTTT	6125	False	NA	22	True	ATTAAA	-34	NA	88049265	88079398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.20	chr3	+	3992	9	NIC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	119	junction_8	16.2076370887307	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTACAGATGAGATTCTT	6532	False	NA	17	True	NA	NA	NA	88049672	88077232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.21	chr3	+	3404	9	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-4	3	intron_retention	FALSE	canonical	3	23	junction_8	44.6843093266529	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGATTCTTCTGCTGTG	6534	False	NA	25	True	NA	NA	NA	88049674	88077240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.22	chr3	+	1658	3	NNC	ENSMUSG00000001419.18	novel	427	2	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGAGATTCTTCTGC	6536	False	NA	21	True	NA	NA	NA	88049676	88077236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88062984_88063091_88075989
ES.21815.23	chr3	+	5983	9	ISM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-2	10	-2	-10	intron_retention	FALSE	canonical	3	138	junction_6	11.4891252930761	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGATACCTCAGTTTG	6536	False	NA	7	True	ATTAAA	-19	NA	88049676	88079383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
ES.21815.24	chr3	+	3343	11	NNC	ENSMUSG00000001419.18	novel	1767	11	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	60.2601858609812	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTGTACAGATGAGATT	6543	False	NA	14	True	NA	NA	NA	88049683	88077229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065777_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.25	chr3	+	5247	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	5	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	53.3541625992449	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGATACCTCAGTTT	6543	False	NA	6	True	ATTAAA	-18	NA	88049683	88079382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.26	chr3	+	2704	9	ISM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-37	1124	7	21	intron_retention	FALSE	canonical	3	138	junction_6	11.4891252930761	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTATTATTATATTTTT	6545	False	NA	NA	False	NA	NA	NA	88049685	88076113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
ES.21815.27	chr3	+	5394	12	FSM	ENSMUSG00000001419.18	ENSMUST00000107559.3	1791	12	-185	-3418	15	-13	multi-exon	FALSE	canonical	3	4	junction_7	60.7094421291809	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6553	False	NA	4	True	ATTAAA	-16	NA	88049693	88079380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88069087_88069109_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.28	chr3	+	4927	9	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	15	-14	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	61.1441687734816	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTTCTGATACCTCAG	6553	False	NA	3	True	ATTAAA	-15	NA	88049693	88079379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.29	chr3	+	5228	12	NNC	ENSMUSG00000001419.18	novel	1791	12	NA	NA	-20	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	51.3020547975057	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	6562	False	NA	-14	True	NA	NA	NA	88049702	88079362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938_88076862_88076979
ES.21815.3	chr3	+	5767	11	NNC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-385	5	intron_retention	FALSE	canonical	3	8	junction_1	44.9182590936025	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGTTTTGATTTCTTT	6153	False	NA	22	True	ATTAAA	-34	NA	88049293	88079398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.30	chr3	+	5244	7	NIC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-20	-14	intron_retention	FALSE	canonical	1	1	junction_3	55.1948568457444	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTTTCTGATACCTCAG	6562	False	NA	3	True	ATTAAA	-15	NA	88049702	88079379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.31	chr3	+	2003	10	Fusion	ENSMUSG00000097428.2_ENSMUSG00000001419.18	novel	3488	10	NA	NA	-20	-1	multi-exon	FALSE	canonical	0	0	junction_9	49.4415729503266	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTTGTGTATTTATTT	6562	False	NA	NA	False	AATAAA	-17	NA	88049702	88110787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88110399
ES.21815.32	chr3	+	4042	8	ISM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-20	4196	-20	-2921	5prime_fragment	FALSE	canonical	3	138	junction_6	12.0796675180627	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAATCAATCAA	6562	False	NA	NA	False	NA	NA	NA	88049702	88073041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264
ES.21815.33	chr3	+	5642	10	ISM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	-170	-3418	-14	-13	intron_retention	FALSE	canonical	1	1	junction_4	60.1184016938426	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6568	False	NA	4	True	ATTAAA	-16	NA	88049708	88079380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065663_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.34	chr3	+	1749	8	NNC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-7	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	55.7981054465882	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	6575	False	NA	-14	True	NA	NA	NA	88049715	88079362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068585_88078761
ES.21815.35	chr3	+	1950	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	165	3286	-35	15	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTATTATTATTATTAT	6703	False	NA	NA	False	NA	NA	NA	88049843	88076107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.36	chr3	+	1938	11	FSM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	-22	-149	-22	19	multi-exon	FALSE	canonical	1	1	junction_4	60.4383983904273	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATATTT	6716	False	NA	NA	False	NA	NA	NA	88049856	88076111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065663_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.37	chr3	+	5661	11	NNC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_1	60.6732230889377	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTTTGGGTTTTGATT	6718	False	NA	17	True	ATTAAA	-29	NA	88049858	88079393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049982_88052596_88052750_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.38	chr3	+	3999	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	155	-1	intron_retention	FALSE	canonical	3	15	junction_1	44.342104395509	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGAGATTCTTCTGC	6895	False	NA	21	True	NA	NA	NA	88050035	88077236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.39	chr3	+	5853	11	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	158	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	49.0885933797252	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6898	False	NA	4	True	ATTAAA	-16	NA	88050038	88079380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.4	chr3	+	3614	11	NNC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-385	8	intron_retention	FALSE	canonical	3	8	junction_1	44.9182590936025	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTGCTGTGTTCTT	6153	False	NA	30	True	NA	NA	NA	88049293	88077245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.40	chr3	+	5487	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	217	-13	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	56.4111888034831	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGATACCTCAGT	6957	False	NA	4	True	ATTAAA	-16	NA	88050097	88079380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.41	chr3	+	7305	8	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	232	4	intron_retention	FALSE	canonical	3	11	junction_2	60.094483430474	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGGTTTTGATTTCTT	6972	False	NA	21	True	ATTAAA	-33	NA	88050112	88079397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063833_88065527_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.42	chr3	+	3318	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	233	-10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	56.4111888034831	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTACTGTACAGATGAGA	6973	False	NA	12	True	NA	NA	NA	88050113	88077227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.43	chr3	+	5539	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	741	-31	intron_retention	FALSE	canonical	3	15	junction_1	44.342104395509	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAACA	7481	False	NA	-14	True	NA	NA	NA	88050621	88079362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.44	chr3	+	3064	11	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	804	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	49.0885933797252	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGAGATTCTTCTGCT	7544	False	NA	22	True	NA	NA	NA	88050684	88077237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88050807_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.45	chr3	+	4893	10	NNC	ENSMUSG00000001419.18	novel	502	3	NA	NA	1697	2	intron_retention	FALSE	canonical	0	0	junction_1	59.6936624218462	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGGTTTTGATTTC	8437	False	NA	19	True	ATTAAA	-31	NA	88051577	88079395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88051678_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.46	chr3	+	6756	5	NIC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-5431	2	intron_retention	FALSE	canonical	3	138	junction_2	11.1214882097676	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGGTTTTGATTTC	9347	False	NA	19	True	ATTAAA	-31	NA	88064835	88079395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
ES.21815.47	chr3	+	1900	5	NIC	ENSMUSG00000001419.18	novel	3488	10	NA	NA	-3427	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	51.9392674187844	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGAGATTCTTCTGCT	NA	False	NA	22	True	NA	NA	NA	88066839	88077237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
ES.21815.48	chr3	+	2933	3	ISM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	18578	1	-1966	-1	intron_retention	FALSE	canonical	3	142	junction_1	3	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGAGATTCTTCTGC	NA	False	NA	21	True	NA	NA	NA	88068300	88077236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88068689_88070264_88070395_88074821
ES.21815.49	chr3	+	897	1	Antisense	novelGene_ENSMUSG00000096935.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2997	False	NA	NA	False	NA	NA	NA	88085021	88085918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_88085000_88085900
ES.21815.5	chr3	+	4354	10	NNC	ENSMUSG00000001419.18	novel	1767	11	NA	NA	-371	-1	intron_retention	FALSE	canonical	3	8	junction_1	58.6574066766056	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGAGATTCTTCTGC	6167	False	NA	21	True	NA	NA	NA	88049307	88077236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88049366_88049676_88049982_88062984_88063170_88063628_88063833_88065527_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.6	chr3	+	5445	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	-40	-4	-40	4	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGGTTTTGATTTCTT	6498	False	NA	21	True	ATTAAA	-33	NA	88049638	88079397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21815.7	chr3	+	3868	9	ISM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-78	1	-34	-1	intron_retention	FALSE	canonical	3	138	junction_6	11.4891252930761	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATGAGATTCTTCTGC	6504	False	NA	21	True	NA	NA	NA	88049644	88077236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821
ES.21815.8	chr3	+	2460	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-69	1097	-25	48	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGCTTTAGAGAGAG	6513	False	NA	NA	False	TTTAAA	-5	NA	88049653	88076140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ES.21815.9	chr3	+	3268	11	FSM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	-225	-1276	-25	1	multi-exon	FALSE	canonical	1	1	junction_4	60.4383983904273	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGATTCTTCTGCTG	6513	False	NA	23	True	NA	NA	NA	88049653	88077238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065527_88065663_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ES.21816.1	chr3	-	3535	10	Antisense	novelGene_ENSMUSG00000001419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGGGGGGGAAAAGAC	1084	False	NA	NA	False	NA	NA	NA	88077227	88049664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88049979_88062981_88063167_88063625_88063834_88065342_88065478_88066427_88066637_88066839_88066899_88068496_88068687_88070262_88070393_88074819_88075042_88075344
ES.21816.2	chr3	-	159	1	Intergenic	novelGene_18040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	88061569	88061410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88061400_88061600
ES.21816.3	chr3	-	2750	9	Antisense	novelGene_ENSMUSG00000001419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGAGCATCGTGTGGCC	1084	False	NA	NA	False	NA	NA	NA	88077227	88063625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88063831_88065338_88065478_88066427_88066637_88066839_88066899_88068496_88068687_88070262_88070393_88074819_88075042_88075344_88075650_88075936
ES.21816.4	chr3	-	3292	4	Antisense	novelGene_ENSMUSG00000001419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAGAAAAAAAAAA	1084	False	NA	NA	False	NA	NA	NA	88077227	88067035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88068687_88070262_88070393_88074819_88075040_88075936
ES.21816.5	chr3	-	1982	1	Antisense	novelGene_ENSMUSG00000001419.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCGTGTCAAAGGGAAAG	1084	False	NA	NA	False	NA	NA	NA	88077227	88075245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88075200_88077200
ES.21817.1	chr3	+	704	3	NNC	ENSMUSG00000097156.8	novel	858	2	NA	NA	-265	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCAGTGTTGCCTTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	88135609	88137264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88135687_88136318_88136673_88136991
ES.21818.1	chr3	-	5506	3	NIC	ENSMUSG00000103766.6	novel	1197	8	NA	NA	39330	1353	intron_retention	TRUE	canonical	2	5	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTCTTCCAACACTG	6127	False	NA	NA	False	NA	NA	NA	88155187	88149333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88152881_88153121_88154887_88154993
ES.21818.2	chr3	-	1386	8	ISM	ENSMUSG00000104445.2	ENSMUST00000171887.4	1937	10	6744	251	6744	-251	3prime_fragment	FALSE	canonical	2	4	junction_4	1.39970842444753	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTGCGCCTCTCC	6042	False	NA	NA	False	GATAAA	-23	NA	88155272	88150431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88150756_88150899_88150974_88151831_88151954_88152439_88152574_88152742_88152881_88153121_88153289_88154738_88154887_88154993
ES.21819.1	chr3	+	163	1	Intergenic	novelGene_18041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	88157088	88157251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88157100_88157300
ES.2182.1	chr1	+	227	1	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATAGCAATTAAGTG	NA	False	NA	NA	False	AATAAA	-8	NA	190756225	190756452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_190756200_190756500
ES.21820.1	chr3	-	182	1	Intergenic	novelGene_18042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	88167425	88167243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88167200_88167400
ES.21821.1	chr3	-	174	1	Intergenic	novelGene_18043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACCTTATAAGT	NA	False	NA	NA	False	NA	NA	NA	88178758	88178584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88178600_88178800
ES.21822.1	chr3	+	167	1	Intergenic	novelGene_18044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAATATTTTT	9059	False	NA	NA	False	NA	NA	NA	88179389	88179556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88179400_88179600
ES.21823.1	chr3	-	178	1	Intergenic	novelGene_18045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGATAGA	NA	False	NA	NA	False	NA	NA	NA	88180157	88179979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88180000_88180200
ES.21824.1	chr3	+	169	1	Intergenic	novelGene_18046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88180845	88181014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88180800_88181000
ES.21825.1	chr3	+	278	1	Intergenic	novelGene_18047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGATTGGAGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	88182514	88182792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88182500_88182800
ES.21826.1	chr3	+	178	1	Intergenic	novelGene_18048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88186374	88186552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88186400_88186600
ES.21827.1	chr3	+	177	1	Intergenic	novelGene_18049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	88190982	88191159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88191000_88191200
ES.21828.1	chr3	-	1828	6	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	33	3301	multi-exon	TRUE	non_canonical	0	0	junction_1	85.8775872972687	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGCAAACAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	88204273	88186762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_88186790_88190700_88191235_88191678_88192623_88194404_88194525_88202697_88202758_88204130
ES.21828.10	chr3	-	170	1	Intergenic	novelGene_18051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTAACT	NA	False	NA	NA	False	NA	NA	NA	88200760	88200590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88200600_88200800
ES.21828.11	chr3	-	2405	2	NNC	ENSMUSG00000010538.15	novel	600	2	NA	NA	-10	650	intron_retention	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATATGGTGGCATATG	NA	False	NA	NA	False	NA	NA	NA	88204155	88201580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88202443_88202612
ES.21828.2	chr3	-	2043	1	FSM	ENSMUSG00000103574.2	ENSMUST00000195161.2	147	1	-48	-1848	-48	1848	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACATGGGTCTGAGT	NA	False	NA	NA	False	CATAAA	-12	NA	88192108	88190065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88190100_88192100
ES.21828.3	chr3	-	483	4	FSM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	99	2	-4	1	multi-exon	TRUE	canonical	3	152	junction_3	20.138409955991	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACATGGGTCTGAGT	NA	False	NA	NA	False	CATAAA	-12	NA	88204207	88190065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204130
ES.21828.4	chr3	-	1172	4	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	38	-1702	multi-exon	FALSE	canonical	2	5	junction_1	81.9878039710785	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAACAGA	NA	False	NA	NA	False	AATAAA	-13	NA	88204268	88191768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_88192623_88194404_88194525_88202697_88202758_88204130
ES.21828.5	chr3	-	1858	4	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	3	-1702	multi-exon	FALSE	canonical	3	18	junction_1	76.027772703284	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAACAGA	NA	False	NA	NA	False	AATAAA	-13	NA	88204200	88191768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_88193377_88194404_88194525_88202697_88202758_88204130
ES.21828.6	chr3	-	1464	4	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	10	-1702	multi-exon	FALSE	canonical	0	0	junction_1	71.6534871602368	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAACAGA	NA	False	NA	NA	False	AATAAA	-13	NA	88204193	88191768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_88192996_88194404_88194519_88202697_88202758_88204130
ES.21828.7	chr3	-	1607	3	ISM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	113	2977	10	-2974	5prime_fragment	FALSE	canonical	3	152	junction_2	22.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTTCCAAAACAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	88204193	88193040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88194525_88202697_88202758_88204130
ES.21828.8	chr3	-	1343	3	ISM	ENSMUSG00000010538.15	ENSMUST00000107556.10	584	4	148	3206	-13	-3203	5prime_fragment	FALSE	canonical	3	152	junction_2	22.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	88204158	88193269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88194525_88202697_88202758_88204130
ES.21828.9	chr3	-	1367	1	Intergenic	novelGene_18050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88198256	88196889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88196900_88198300
ES.21829.1	chr3	+	2116	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	-132	-7	-132	7	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTGTTTTTCAACCTT	3672	False	NA	30	True	ATTAAA	-22	NA	88204290	88229081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.10	chr3	+	2262	13	FSM	ENSMUSG00000001416.14	ENSMUST00000168062.8	1943	13	-60	-259	2	0	multi-exon	FALSE	canonical	3	2266	junction_3	126.158630303281	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3816	False	NA	22	True	ATTAAA	-14	NA	88204434	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ES.21829.12	chr3	+	2330	12	FSM	ENSMUSG00000001416.14	ENSMUST00000167718.2	2056	12	-15	-259	12	0	multi-exon	FALSE	canonical	3	2432	junction_7	97.6323005756931	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3826	False	NA	22	True	ATTAAA	-14	NA	88204444	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88204574_88206648_88206711_88208106_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ES.21829.13	chr3	+	1945	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	689.31508756216	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3827	False	NA	22	True	ATTAAA	-14	NA	88204445	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220674_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.16	chr3	+	3425	12	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_9	748.029455379735	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3827	False	NA	23	True	ATTAAA	-15	NA	88204445	88229074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225838_88227773_88228013_88228320_88228453_88228750
ES.21829.2	chr3	+	2052	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	689.758245960005	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3725	False	NA	22	True	ATTAAA	-14	NA	88204343	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225838_88227773_88228013_88228320_88228453_88228750
ES.21829.22	chr3	+	4472	11	ISM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	42	2	5	0	intron_retention	FALSE	canonical	3	2266	junction_3	128.881495956557	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCGTTGTCATGTGTTT	3846	False	NA	21	True	ATTAAA	-13	NA	88204464	88229072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652
ES.21829.24	chr3	+	1915	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	689.290553725801	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3856	False	NA	22	True	ATTAAA	-14	NA	88204474	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216646_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.26	chr3	+	3392	12	NIC	ENSMUSG00000001416.14	novel	1804	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2432	junction_6	95.0686572261166	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3862	False	NA	22	True	ATTAAA	-14	NA	88204480	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.28	chr3	+	2518	12	ISM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	64	1	6	0	intron_retention	FALSE	canonical	3	2266	junction_3	123.010178978129	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3868	False	NA	22	True	ATTAAA	-14	NA	88204486	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766
ES.21829.3	chr3	+	2149	14	NIC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_8	685.241545975841	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3782	False	NA	22	True	ATTAAA	-14	NA	88204400	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220397_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.30	chr3	+	1875	14	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	690.71623918721	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCGTTGTCATGTGTT	3893	False	NA	20	True	ATTAAA	-12	NA	88204511	88229071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88206711_88208116_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.31	chr3	+	2949	1	FSM	ENSMUSG00000001416.14	ENSMUST00000193666.2	1831	1	93	-1211	22	1211	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGTGTGGCTCTGG	3898	False	NA	NA	False	NA	NA	NA	88204516	88207465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88204500_88207500
ES.21829.32	chr3	+	3941	10	NIC	ENSMUSG00000001416.14	novel	2056	12	NA	NA	43	0	intron_retention	FALSE	canonical	3	2432	junction_6	96.571217244063	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3919	False	NA	22	True	ATTAAA	-14	NA	88204537	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766
ES.21829.33	chr3	+	1678	10	NNC	ENSMUSG00000001416.14	novel	472	2	NA	NA	1706	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	819.330621096677	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCGTTGTCATGTGTT	4532	False	NA	20	True	ATTAAA	-12	NA	88211850	88229071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88211979_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.34	chr3	+	5939	3	NIC	ENSMUSG00000001416.14	novel	1804	12	NA	NA	-7408	0	intron_retention	FALSE	canonical	3	2551	junction_1	73	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	2650	False	NA	22	True	ATTAAA	-14	NA	88220893	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88225834_88227766_88228013_88228320
ES.21829.4	chr3	+	1879	12	FSM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	-75	0	-17	0	multi-exon	FALSE	canonical	1	19	junction_2	744.224284153619	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3787	False	NA	22	True	ATTAAA	-14	NA	88204405	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88204574_88206648_88206711_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.5	chr3	+	2053	13	NIC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	2432	junction_7	93.499071593727	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3806	False	NA	23	True	ATTAAA	-15	NA	88204424	88229074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88206711_88208106_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.6	chr3	+	3388	15	NNC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	898.701478211077	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCGTTGTCATGTGTT	3813	False	NA	20	True	ATTAAA	-12	NA	88204431	88229071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88217437_88218861_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.7	chr3	+	4371	12	NIC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2432	junction_6	97.6561686363297	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3813	False	NA	23	True	ATTAAA	-15	NA	88204431	88229074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88206711_88208106_88208299_88210074_88210172_88212319_88212438_88216467_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ES.21829.8	chr3	+	2020	15	NIC	ENSMUSG00000001416.14	novel	1977	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	897.498541866816	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTTGTCATGTGTTTT	3814	False	NA	22	True	ATTAAA	-14	NA	88204432	88229073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228616_88228671_88228750
ES.2183.1	chr1	-	4276	11	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-85	24	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	11.1427106217473	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGTCTGATATGTGT	NA	False	NA	25	True	AATAAA	-44	NA	190758440	190738019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272_190753454_190757573
ES.2183.10	chr1	-	4007	10	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	11.3409560421782	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATGTCCTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	190758355	190738046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745595_190747550_190747696_190753272_190753454_190757573
ES.2183.11	chr1	-	3954	9	NIC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	8.71421252896669	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATGTCCTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	190758383	190738046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
ES.2183.12	chr1	-	3357	9	FSM	ENSMUSG00000066595.10	ENSMUST00000192666.2	3666	9	-96	405	61	-404	multi-exon	FALSE	canonical	2	3	junction_8	11.3571288184999	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTTGTTTTGTTTTTT	NA	False	NA	NA	False	GATAAA	-28	NA	190758260	190738450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190757573
ES.2183.13	chr1	-	214	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACAAAACCCAAGGTGAT	NA	False	NA	NA	False	NA	NA	NA	190743225	190743011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_190743000_190743200
ES.2183.2	chr1	-	4140	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	-85	-15	-85	15	multi-exon	FALSE	canonical	2	14	junction_1	7.45521608765167	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAATCCTGGTGTCT	NA	False	NA	16	True	AATAAA	-35	NA	190758440	190738028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
ES.2183.3	chr1	-	3850	9	FSM	ENSMUSG00000066595.10	ENSMUST00000192666.2	3666	9	-180	-4	11	2	multi-exon	FALSE	canonical	2	3	junction_8	11.3571288184999	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGTCCTTTAAAAACA	NA	False	NA	3	True	AATAAA	-22	NA	190758344	190738041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190757573
ES.2183.4	chr1	-	8807	9	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-28	0	intron_retention	FALSE	canonical	2	5	junction_7	11.399013115178	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTCCTTTAAAAA	NA	False	NA	1	True	AATAAA	-20	NA	190758383	190738043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272
ES.2183.6	chr1	-	3898	8	NNC	ENSMUSG00000066595.10	novel	3666	9	NA	NA	4598	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	10.0974840268985	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATATGTCCTTTAAA	NA	False	NA	-1	True	AATAAA	-18	NA	190753566	190738045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190744335_190744440_190745560_190745629_190747554_190747696_190752632
ES.2183.7	chr1	-	3638	8	NIC	ENSMUSG00000066595.10	novel	3666	9	NA	NA	74	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	10.4666623337224	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATATGTCCTTTAAA	NA	False	NA	-1	True	AATAAA	-18	NA	190758247	190738045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190744335_190744440_190745560_190745629_190747554_190747696_190757573
ES.2183.9	chr1	-	3493	11	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-737	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.0552671362941	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATGTCCTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	190759092	190738046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272_190753454_190758981
ES.21830.1	chr3	+	1582	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	3	2634	3	98	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGAGTCTTTTGTTTG	3998	False	NA	15	True	TTTAAA	-25	NA	88232332	88235986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.10	chr3	+	1250	5	FSM	ENSMUSG00000001418.14	ENSMUST00000176425.2	960	5	-33	-257	-6	44	multi-exon	FALSE	canonical	3	4	junction_1	416.550717200199	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTCCAGTCTCTCT	4021	False	NA	10	True	AATAGA	-13	NA	88232355	88235932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88232509_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.11	chr3	+	2163	4	FSM	ENSMUSG00000001418.14	ENSMUST00000140039.2	861	4	-995	-307	-6	44	multi-exon	FALSE	canonical	3	936	junction_2	30.8652987457868	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTCCAGTCTCTCT	4021	False	NA	10	True	AATAGA	-13	NA	88232355	88235932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.12	chr3	+	1330	6	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-5	40	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	463.823845872547	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAAGATTTCCAGTCT	4022	False	NA	6	True	AATAGA	-9	NA	88232356	88235928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88233237_88233323_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.13	chr3	+	1497	6	NNC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-5	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	407.055475334751	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCCAGTCTCTCTTA	4022	False	NA	12	True	AATAGA	-15	NA	88232356	88235934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232509_88232983_88233239_88233430_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.14	chr3	+	3534	2	NIC	ENSMUSG00000001418.14	novel	861	4	NA	NA	-5	91	intron_retention	FALSE	canonical	3	1007	junction_1	0	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4022	False	NA	8	True	TTTAAA	-18	NA	88232356	88235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88235421_88235509
ES.21830.15	chr3	+	1776	6	NNC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-3	86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	388.306579908196	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTATGTATTTGTGA	4024	False	NA	3	True	TTTAAA	-13	NA	88232358	88235974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232741_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.16	chr3	+	4200	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	35	-16	0	16	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGATGACTTCAAATC	4030	False	NA	NA	False	NA	NA	NA	88232364	88238636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.17	chr3	+	2917	3	NNC	ENSMUSG00000001418.14	novel	861	4	NA	NA	0	91	intron_retention	FALSE	canonical	0	0	junction_1	503.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4032	False	NA	8	True	TTTAAA	-18	NA	88232366	88235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88234557_88235163_88235421_88235509
ES.21830.19	chr3	+	1579	6	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	1	46	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	397.981607615226	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCCAGTCTCTCTTA	4033	False	NA	12	True	AATAGA	-15	NA	88232367	88235934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233323_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.2	chr3	+	1427	6	NNC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-14	45	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	408.562161733071	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATTTCCAGTCTCTCTT	4013	False	NA	11	True	AATAGA	-14	NA	88232347	88235933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233850_88235163_88235421_88235509
ES.21830.20	chr3	+	1066	4	NIC	ENSMUSG00000001418.14	novel	960	5	NA	NA	1	91	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	470.015838976612	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4033	False	NA	8	True	TTTAAA	-18	NA	88232367	88235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88233421_88233620_88235163_88235421_88235509
ES.21830.21	chr3	+	1457	4	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	1	44	intron_retention	FALSE	canonical	3	16	junction_2	497.039457409794	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTCCAGTCTCTCT	4033	False	NA	10	True	AATAGA	-13	NA	88232367	88235932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233620_88235163_88235421_88235509
ES.21830.22	chr3	+	2202	3	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	1	91	intron_retention	FALSE	canonical	3	936	junction_2	23.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4033	False	NA	8	True	TTTAAA	-18	NA	88232367	88235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88233239_88233421_88233937_88235163
ES.21830.23	chr3	+	1155	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	49	3015	0	-20	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGGGGGAGGCCTAT	4044	False	NA	NA	False	NA	NA	NA	88232378	88235605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.24	chr3	+	1776	4	NNC	ENSMUSG00000001418.14	novel	1017	5	NA	NA	19	90	intron_retention	FALSE	non_canonical	0	0	junction_1	458.885848792728	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATTTGTGAGTCT	4073	False	NA	7	True	TTTAAA	-17	NA	88232407	88235978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232505_88232983_88233937_88235163_88235421_88235509
ES.21830.25	chr3	+	1928	1	FSM	ENSMUSG00000001418.14	ENSMUST00000193646.2	4457	1	1643	886	654	44	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTCCAGTCTCTCT	5670	False	NA	10	True	AATAGA	-13	NA	88234004	88235932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88234000_88235900
ES.21830.3	chr3	+	2965	4	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-9	91	intron_retention	FALSE	canonical	3	949	junction_2	72.7843084432047	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTATTTGTGAGTCTT	4018	False	NA	8	True	TTTAAA	-18	NA	88232352	88235979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233620_88233717_88235421_88235509
ES.21830.4	chr3	+	3509	7	NNC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-8	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	377.582404545315	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGATGACTTCAAATC	4019	False	NA	NA	False	NA	NA	NA	88232353	88238636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509_88237478_88238179
ES.21830.5	chr3	+	3489	4	NIC	ENSMUSG00000001418.14	novel	1017	5	NA	NA	-7	816	intron_retention	FALSE	canonical	3	936	junction_2	77.5127229699888	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTGATGGAGAGTGA	4020	False	NA	NA	False	ATTAAA	-17	NA	88232354	88237634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233937_88235163_88235421_88235509
ES.21830.6	chr3	+	1372	6	NNC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-7	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	409.709653291206	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGATTTCCAGTCTCT	4020	False	NA	8	True	AATAGA	-11	NA	88232354	88235930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88232509_88232983_88233239_88233421_88233620_88233849_88233937_88235163_88235421_88235509
ES.21830.7	chr3	+	1532	6	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-6	44	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	403.575519574714	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTCCAGTCTCTCT	4021	False	NA	10	True	AATAGA	-13	NA	88232355	88235932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235482
ES.21830.8	chr3	+	3207	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	26	986	-6	816	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTGATGGAGAGTGA	4021	False	NA	NA	False	ATTAAA	-17	NA	88232355	88237634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ES.21830.9	chr3	+	1612	3	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	-6	98	intron_retention	FALSE	canonical	3	16	junction_2	554	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGAGTCTTTTGTTTG	4021	False	NA	15	True	TTTAAA	-25	NA	88232355	88235986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88232509_88232983_88233620_88235163
ES.21831.1	chr3	+	4445	22	NNC	ENSMUSG00000001415.11	novel	1010	9	NA	NA	-1904	0	intron_retention	FALSE	canonical	2	2	junction_1	79.7147408532265	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88241662	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88241898_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.10	chr3	+	6401	20	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	4	-4	intron_retention	FALSE	canonical	3	253	junction_5	45.2848785093506	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGCCTGCTGTGTC	NA	False	NA	9	True	AATAAA	-16	NA	88243570	88269641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88260446_88261182_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.11	chr3	+	4403	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	79.7150537597408	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243570	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249788_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.12	chr3	+	5179	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	5	-1	intron_retention	FALSE	canonical	3	253	junction_5	45.155813579206	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243571	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.13	chr3	+	4401	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	77.214898753862	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243571	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249830_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.14	chr3	+	4449	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	5	0	intron_retention	FALSE	canonical	2	9	junction_5	77.786643485639	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243571	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252766_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.15	chr3	+	5443	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	79.846479681075	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243571	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88259538_88259917_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.17	chr3	+	4123	21	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_11	104.760429075105	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243571	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250197_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258087_88259917_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.19	chr3	+	4510	23	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_5	99.8245257960849	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243573	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88252974_88253044_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.2	chr3	+	5381	22	NNC	ENSMUSG00000001415.11	novel	1010	9	NA	NA	-1839	0	intron_retention	FALSE	non_canonical	0	0	junction_12	102.049430021928	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88241727	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88241898_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88259538_88259917_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.20	chr3	+	4788	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	8	0	intron_retention	FALSE	canonical	3	253	junction_5	43.2005497650203	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243574	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88268200_88268331
ES.21831.22	chr3	+	4423	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	10	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	102.147374747472	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTCTGCCTGCTGTGT	NA	False	NA	8	True	AATAAA	-15	NA	88243576	88269640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249170_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261186_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.23	chr3	+	4427	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_13	102.126905181273	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243577	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261186_88261259_88261838_88262015_88262884_88263044_88265965_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.24	chr3	+	5816	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	13	0	intron_retention	FALSE	canonical	3	253	junction_5	44.1385319194012	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243579	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.25	chr3	+	4017	11	NIC	ENSMUSG00000001415.11	novel	3119	12	NA	NA	13	-132	intron_retention	FALSE	canonical	3	259	junction_9	13.7916641490431	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGAGGCAGGCGGATT	NA	False	NA	NA	False	NA	NA	NA	88243579	88259904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285
ES.21831.27	chr3	+	5426	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	14	0	intron_retention	FALSE	canonical	3	259	junction_9	42.9677495338073	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243580	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.28	chr3	+	5475	20	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	14	-2	intron_retention	FALSE	canonical	3	253	junction_5	44.1447505686699	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88243580	88269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.3	chr3	+	4460	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	-12	0	-12	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243554	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.30	chr3	+	4542	23	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	15	-3	intron_retention	FALSE	canonical	0	0	junction_1	100.0062498047	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243581	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88244446_88244559_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.31	chr3	+	4548	23	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	15	0	intron_retention	FALSE	canonical	2	4	junction_1	98.7110002494551	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243581	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88247955_88248071_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.32	chr3	+	4407	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	17	0	intron_retention	FALSE	canonical	1	6	junction_10	78.4920811465787	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243583	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257508_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.33	chr3	+	3889	17	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_3	90.8318974466019	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243583	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.34	chr3	+	4463	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	19	-3	intron_retention	FALSE	canonical	2	5	junction_7	100.248557309471	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243585	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252766_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.35	chr3	+	3114	12	FSM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-32	37	19	-37	multi-exon	FALSE	canonical	3	253	junction_5	17.1507655902172	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	88243585	88259999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285
ES.21831.36	chr3	+	5341	23	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	19	-3	intron_retention	FALSE	non_canonical	0	0	junction_13	99.7797160525985	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243585	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88258990_88259548_88259911_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.37	chr3	+	4639	23	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	19	0	intron_retention	TRUE	canonical	2	3	junction_2	99.0989571377274	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243585	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88247955_88248166_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.38	chr3	+	6432	19	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	24	-1	intron_retention	FALSE	canonical	3	253	junction_5	42.3730128999841	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243590	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88267713_88268060_88268200_88268331
ES.21831.39	chr3	+	1969	3	NIC	ENSMUSG00000001415.11	novel	3119	12	NA	NA	-25	-1656	intron_retention	FALSE	canonical	3	305	junction_1	1	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTCAGAGATGCAT	NA	False	NA	NA	False	NA	NA	NA	88243592	88253247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88250344_88252669
ES.21831.4	chr3	+	4491	22	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-12	0	intron_retention	FALSE	canonical	3	5	junction_7	79.1884860729804	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243554	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.40	chr3	+	4897	20	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	30	1	-21	-1	intron_retention	FALSE	canonical	3	253	junction_5	41.5768820273187	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243596	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637
ES.21831.41	chr3	+	4094	21	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_3	104.897283091603	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243599	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249865_88250197_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258081_88259908_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.43	chr3	+	4309	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-15	-4	intron_retention	FALSE	canonical	0	0	junction_1	82.0391827116775	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGCCTGCTGTGTC	NA	False	NA	9	True	AATAAA	-16	NA	88243602	88269641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.44	chr3	+	4401	14	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	99.1392541629012	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243603	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253127_88259911_88260446_88261182_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.45	chr3	+	5421	19	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_11	85.9302940300961	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243603	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258087_88259917_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.46	chr3	+	1144	5	ISM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	-14	6804	-14	-1671	5prime_fragment	FALSE	canonical	3	289	junction_3	7.49583217528247	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCAGC	NA	False	NA	NA	False	NA	NA	NA	88243603	88253232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669
ES.21831.47	chr3	+	5725	20	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	253	junction_5	46.3276300654288	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243603	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.48	chr3	+	5434	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	5	junction_6	80.4436914866542	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.49	chr3	+	6682	21	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	canonical	1	2	junction_11	80.712622928511	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88258990_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.5	chr3	+	5778	20	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-7	0	intron_retention	FALSE	canonical	2	9	junction_5	81.657958342496	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243559	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252766_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.50	chr3	+	4789	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	5	junction_7	79.4696640234499	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243603	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88268200_88268331
ES.21831.51	chr3	+	4388	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	98.358500180834	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88243603	88269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249830_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268310
ES.21831.53	chr3	+	4800	19	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	canonical	1	10	junction_18	71.0494524353145	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88267637
ES.21831.55	chr3	+	5422	19	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_11	85.9302940300961	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243603	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258081_88259911_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.57	chr3	+	7106	19	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	253	junction_5	46.5254477028499	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88243604	88269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.58	chr3	+	5100	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	253	junction_5	40.245838294164	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243605	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88267713_88268060_88268200_88268331
ES.21831.59	chr3	+	6716	19	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	259	junction_9	45.288274175307	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243606	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.6	chr3	+	4412	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_3	80.0465850758977	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243561	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250224_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.60	chr3	+	4586	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	15	-3	intron_retention	FALSE	canonical	0	0	junction_1	118.754763599407	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243632	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88244175_88244559_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.63	chr3	+	5900	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	114	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	130.589714255709	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243785	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88247955_88248071_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257508_88258003_88258142_88258285_88259538_88259917_88260446_88261182_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.64	chr3	+	4407	22	NNC	ENSMUSG00000001415.11	novel	1010	9	NA	NA	289	-2	intron_retention	FALSE	canonical	0	0	junction_1	98.9381262934927	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88243960	88269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88244176_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267653_88267713_88268060_88268200_88268331
ES.21831.65	chr3	+	3830	18	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	9102	1	2921	-1	3prime_fragment	FALSE	canonical	3	253	junction_1	48.1821084110508	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88252668	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.66	chr3	+	5055	15	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	4034	-3	intron_retention	FALSE	canonical	3	5	junction_2	95.9154602251591	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88253781	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88253842_88254824_88254904_88256417_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.67	chr3	+	4409	10	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-1515	-4	intron_retention	FALSE	canonical	3	279	junction_3	43.1091064826029	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGCCTGCTGTGTC	NA	False	NA	9	True	AATAAA	-16	NA	88258282	88269641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.68	chr3	+	3724	10	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-1503	-2	intron_retention	FALSE	canonical	0	0	junction_1	118.713265923286	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGCCTGCTGTGTCTT	NA	False	NA	11	True	AATAAA	-18	NA	88258294	88269643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88258663_88259917_88260446_88261182_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.69	chr3	+	2535	10	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	-1096	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	111.884640766757	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88258701	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88268060_88268200_88268331
ES.21831.7	chr3	+	5464	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	79.846479681075	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243566	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88259548_88259911_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.70	chr3	+	3551	9	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	81	-3	intron_retention	FALSE	canonical	3	279	junction_2	43.8247575578006	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88259878	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.71	chr3	+	2344	6	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	21887	1	-47	-1	3prime_fragment	FALSE	canonical	3	371	junction_4	12.3385574521497	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88265453	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.72	chr3	+	2752	4	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	21960	0	26	0	intron_retention	FALSE	canonical	3	384	junction_1	8.04155872120988	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88265526	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88266020_88266333_88266494_88266854_88266946_88267637
ES.21831.73	chr3	+	3037	4	NIC	ENSMUSG00000001415.11	novel	833	7	NA	NA	145	-3	intron_retention	FALSE	canonical	3	376	junction_3	9.0921211313239	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88265798	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88266020_88266333_88266494_88266854_88268200_88268331
ES.21831.74	chr3	+	2342	5	NIC	ENSMUSG00000001415.11	novel	833	7	NA	NA	150	-1	intron_retention	FALSE	canonical	3	376	junction_4	10.779030568655	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88265803	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88266020_88266333_88266494_88266854_88266946_88267637_88268200_88268331
ES.21831.75	chr3	+	2885	4	NIC	ENSMUSG00000001415.11	novel	833	7	NA	NA	312	-1	intron_retention	FALSE	canonical	3	371	junction_2	5.35412613473634	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88265965	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88266020_88266333_88267713_88268060_88268200_88268331
ES.21831.76	chr3	+	3643	1	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	349	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88266002	88269645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88266000_88269600
ES.21831.8	chr3	+	4419	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_11	79.9241136677676	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCCTGCTGTGTCTTC	NA	False	NA	12	True	AATAAA	-19	NA	88243567	88269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258312_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21831.9	chr3	+	5022	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	3	-3	intron_retention	FALSE	canonical	3	253	junction_5	45.155813579206	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGCCTGCTGTGTCT	NA	False	NA	10	True	AATAAA	-17	NA	88243569	88269642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ES.21832.1	chr3	-	2550	4	NIC	ENSMUSG00000001420.14	novel	2406	4	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	8.9566858950296	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGAGAGACTGGAA	NA	False	NA	NA	False	NA	NA	NA	88243474	88235959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88237240_88239746_88239961_88240198_88240990_88243209
ES.21832.2	chr3	-	2302	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	106	-2	56	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGAGAGACTGGAA	NA	False	NA	NA	False	NA	NA	NA	88241705	88235959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
ES.21832.3	chr3	-	1987	4	NNC	ENSMUSG00000001420.14	novel	2053	4	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8.48528137423857	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241604	88236350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88237240_88239746_88239961_88240198_88240990_88241511
ES.21832.4	chr3	-	4404	3	ISM	ENSMUSG00000001420.14	ENSMUST00000107552.2	2063	4	-1738	-3	-44	2	intron_retention	FALSE	canonical	3	19	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88243499	88236350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88237240_88239746_88239961_88240198
ES.21832.5	chr3	-	1966	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	51	389	1	2	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGCTCGTTCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	88241760	88236350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
ES.21832.6	chr3	-	1763	4	FSM	ENSMUSG00000001420.14	ENSMUST00000001456.11	2406	4	51	592	1	-200	multi-exon	FALSE	canonical	3	8	junction_3	5.18544972870135	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGTCTTTCCTGTCC	NA	False	NA	NA	False	NA	NA	NA	88241760	88236553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241688
ES.21832.7	chr3	-	1415	1	Genic_Genomic	ENSMUSG00000001420.14	novel	NA	NA	NA	NA	-11	-1607	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTTGCAGTGTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	88243466	88242051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88242100_88243500
ES.21833.1	chr3	-	2444	1	Antisense	novelGene_ENSMUSG00000001415.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88257463	88255019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88255000_88257500
ES.21834.1	chr3	-	5446	1	Antisense	novelGene_ENSMUSG00000001415.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCCCTGCCTTAAAAG	6575	False	NA	NA	False	NA	NA	NA	88270336	88264890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88264900_88270300
ES.21834.2	chr3	-	2354	2	Antisense	novelGene_ENSMUSG00000001415.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTGCCCTGCCTTA	9302	False	NA	NA	False	NA	NA	NA	88267609	88264894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88266491_88266851
ES.21834.3	chr3	-	5100	2	Antisense	novelGene_ENSMUSG00000001415.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6575	False	NA	NA	False	NA	NA	NA	88270336	88264921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88266011_88266325
ES.21835.1	chr3	+	3580	2	FSM	ENSMUSG00000041423.17	ENSMUST00000123200.2	806	2	-37	-2737	-28	-2	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAGCTCTCTGGGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88271862	88275846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88271931_88272334
ES.21835.2	chr3	+	1766	7	Fusion	ENSMUSG00000096792.3_ENSMUSG00000041423.17_ENSMUSG00000078691.4	novel	1670	8	NA	NA	-19	574	intron_retention	TRUE	canonical	0	0	junction_6	1.10554159678513	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAGCTCTCTGGGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88271871	88290725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88271931_88272334_88272411_88272981_88273392_88273466_88273594_88283331_88283429_88289405_88289557_88289879
ES.21835.3	chr3	+	1760	7	NIC	ENSMUSG00000041423.17	novel	1670	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	1	junction_6	1.49071198499986	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGCTCTCTGGGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	88271883	88275847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88271931_88272334_88272411_88272981_88273392_88273466_88273594_88274211_88274309_88274525_88274677_88274995
ES.21835.4	chr3	+	2323	6	NIC	ENSMUSG00000041423.17	novel	1670	8	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_5	1.62480768092719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGCTCTCTGGGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	88271891	88275847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88271931_88272334_88273392_88273466_88273594_88274211_88274309_88274525_88274677_88274995
ES.21835.5	chr3	+	2848	4	NIC	ENSMUSG00000041423.17	novel	1670	8	NA	NA	7	3	intron_retention	FALSE	canonical	2	3	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTCTGGGATTGAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	88271906	88275851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88271931_88272334_88273392_88273466_88273594_88274211
ES.21835.6	chr3	+	2617	6	Fusion	ENSMUSG00000041423.17_ENSMUSG00000078691.4	novel	1670	8	NA	NA	17	574	intron_retention	FALSE	canonical	0	0	junction_1	2.13541565040626	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAGCTCTCTGGGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88271916	88290725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88273110_88273188_88273392_88273466_88273594_88274211_88274309_88274525_88274677_88289879
ES.21836.1	chr3	-	3631	4	FSM	ENSMUSG00000074489.10	ENSMUST00000075523.11	717	4	-2908	-6	4	0	multi-exon	FALSE	canonical	3	35	junction_3	4.49691252107735	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGAGTCTGTCCATT	7132	False	NA	NA	False	AATAAA	-19	NA	88280046	88275922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779
ES.21836.2	chr3	-	2578	5	NIC	ENSMUSG00000074489.10	novel	1047	7	NA	NA	-2	0	intron_retention	TRUE	canonical	3	20	junction_4	10.0249688278817	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGAGTCTGTCCATT	7126	False	NA	NA	False	AATAAA	-19	NA	88280052	88275922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88278787_88279845
ES.21836.3	chr3	-	3837	3	FSM	ENSMUSG00000074489.10	ENSMUST00000140259.2	816	3	-3021	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGGAGTCTGTC	7128	False	NA	NA	False	AATAAA	-15	NA	88280050	88275926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88276460_88276602_88276636_88276779
ES.21836.4	chr3	-	686	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	6.26498204307083	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279858
ES.21836.5	chr3	-	617	5	NNC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	18.3166590840142	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276983_88279994
ES.21836.6	chr3	-	3110	5	ISM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	0	0	0	intron_retention	FALSE	canonical	3	22	junction_4	9.23309265630969	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434
ES.21836.7	chr3	-	2050	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	1	0	-1	multi-exon	FALSE	canonical	3	20	junction_5	10.571660229122	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTGGGCTGGAGTCT	7128	False	NA	NA	False	AATAAA	-12	NA	88280050	88275929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
ES.21836.8	chr3	-	697	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	35.14612354158	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGCTGGGCTGGAGTC	7128	False	NA	NA	False	AATAAA	-11	NA	88280050	88275930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279845
ES.21836.9	chr3	-	3096	1	NIC	ENSMUSG00000074489.10	novel	1047	7	NA	NA	3	-1023	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATAGTGTCGTCGTT	7131	False	NA	NA	False	NA	NA	NA	88280047	88276951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88277000_88280000
ES.21837.1	chr3	-	161	1	Intergenic	novelGene_18052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAAACCTTTTTA	5623	False	NA	NA	False	NA	NA	NA	88281555	88281394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88281400_88281600
ES.21838.1	chr3	-	6332	2	NNC	ENSMUSG00000028066.16	novel	795	3	NA	NA	2199	6887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88301828	88294562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88299589_88300522
ES.21838.10	chr3	-	1470	4	NIC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-8	3	intron_retention	FALSE	canonical	0	0	junction_1	407.613378910294	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317623	88301446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88301878_88303211_88303408_88306441_88307124_88317462
ES.21838.11	chr3	-	5382	3	NIC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-4	3	intron_retention	FALSE	canonical	3	880	junction_1	13.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317642	88301446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88306543_88307017_88307124_88317462
ES.21838.12	chr3	-	4062	4	NIC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-18	3	intron_retention	FALSE	canonical	0	0	junction_1	421.344145430892	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGAGGAGGTTTCCT	NA	False	NA	-3	True	AATAAA	-19	NA	88317656	88301446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88301878_88303211_88306543_88307017_88307124_88317462
ES.21838.13	chr3	-	1065	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-44	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.732225402279	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGTGAGGAGGTTTCC	NA	False	NA	-4	True	AATAAA	-18	NA	88317682	88301447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88301878_88303211_88303408_88306441_88306543_88307005_88307124_88317462
ES.21838.15	chr3	-	938	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	446.352649258409	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCTGTGAGGAGGTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	88317629	88301448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88301878_88303211_88303347_88306441_88306543_88307017_88307124_88317462
ES.21838.16	chr3	-	2173	8	Fusion	ENSMUSG00000028066.16_ENSMUSG00000050144.14	novel	1007	5	NA	NA	5	0	multi-exon	FALSE	non_canonical	0	0	junction_1	305.025726583105	319	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	4103	False	NA	-6	True	AATAAA	-16	NA	88332409	88301449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_88301878_88303211_88303408_88303788_88303995_88306441_88306543_88307017_88307124_88323294_88323418_88327807_88328446_88332034
ES.21838.17	chr3	-	4525	3	NIC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_1	453.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCATCTGTGAGGAGGT	NA	False	NA	-8	True	AATAAA	-14	NA	88317649	88301451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88301878_88303211_88307124_88317462
ES.21838.18	chr3	-	1017	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	377.05205210952	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCATCTGTGAGGAGGT	NA	False	NA	-8	True	AATAAA	-14	NA	88317652	88301451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88301872_88303207_88303408_88306441_88306543_88307017_88307124_88317462
ES.21838.2	chr3	-	1086	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	-74	-5	-74	5	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGAGGTTTCCTTG	NA	False	NA	-1	True	AATAAA	-21	NA	88317712	88301444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ES.21838.20	chr3	-	3567	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	14	-4	-13	3	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4080	False	NA	0	True	ATTAAA	-22	NA	88332432	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
ES.21838.21	chr3	-	4193	2	ISM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	7331	-3	7330	3	3prime_fragment	FALSE	canonical	3	60	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	9404	False	NA	0	True	ATTAAA	-22	NA	88325084	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88320205_88323294
ES.21838.22	chr3	-	3508	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	0	-4	0	3	multi-exon	FALSE	canonical	3	7	junction_3	25.4689353265241	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4093	False	NA	0	True	ATTAAA	-22	NA	88332419	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
ES.21838.23	chr3	-	3452	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	-20	-3	11	3	multi-exon	FALSE	canonical	0	0	junction_3	28.7672653471886	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4077	False	NA	0	True	ATTAAA	-22	NA	88332435	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
ES.21838.24	chr3	-	2971	4	NNC	ENSMUSG00000050144.14	novel	3429	4	NA	NA	106	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.2842712474619	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4204	False	NA	0	True	ATTAAA	-22	NA	88332308	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88320205_88323294_88323355_88328093_88328446_88332152
ES.21838.25	chr3	-	3324	4	NNC	ENSMUSG00000050144.14	novel	3429	4	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.9814751264641	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4101	False	NA	0	True	ATTAAA	-22	NA	88332411	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88320205_88323294_88323418_88327807_88328446_88332251
ES.21838.26	chr3	-	3195	4	NNC	ENSMUSG00000050144.14	novel	3577	4	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3901847788988	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTGGGTTTTGT	4103	False	NA	0	True	ATTAAA	-22	NA	88332409	88317801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88320205_88323294_88323423_88328005_88328295_88332034
ES.21838.28	chr3	-	7701	2	NIC	ENSMUSG00000050144.14	novel	3429	4	NA	NA	2524	0	intron_retention	FALSE	canonical	3	62	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCTTTTGGGTTT	6622	False	NA	-3	True	ATTAAA	-19	NA	88329890	88317804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88323423_88327807
ES.21838.3	chr3	-	879	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	-80	-4	-75	4	multi-exon	FALSE	canonical	0	0	junction_1	8.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGAGGTTTCCTT	NA	False	NA	-2	True	AATAAA	-20	NA	88317713	88301445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88301878_88303211_88303408_88317462
ES.21838.5	chr3	-	899	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	424.372698815558	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGAGGTTTCCTT	NA	False	NA	-2	True	AATAAA	-20	NA	88317669	88301445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317605
ES.21838.6	chr3	-	1122	6	NNC	ENSMUSG00000028066.16	novel	802	6	NA	NA	-44	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	418.733614604799	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGAGGTTTCCTT	NA	False	NA	-2	True	AATAAA	-20	NA	88317682	88301445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88301878_88303020_88303115_88303238_88303408_88306441_88306543_88307017_88307124_88317462
ES.21839.1	chr3	+	180	1	Intergenic	novelGene_18053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATTTATTTAT	9301	False	NA	NA	False	NA	NA	NA	88335729	88335909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88335700_88335900
ES.21839.2	chr3	+	1028	1	FSM	ENSMUSG00000106568.2	ENSMUST00000199370.2	460	1	-501	-67	-501	67	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACATGAGGGTCAGAGTG	9313	False	NA	NA	False	NA	NA	NA	88335741	88336769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88335700_88336800
ES.2184.1	chr1	+	204	1	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGCACATTGATCCT	1743	False	NA	NA	False	AATAAA	-17	NA	190762704	190762908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_190762700_190762900
ES.21840.1	chr3	+	1511	1	Intergenic	novelGene_18054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAAGC	1875	False	NA	NA	False	NA	NA	NA	88352979	88354490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88353000_88354500
ES.21841.1	chr3	-	3244	15	NIC	ENSMUSG00000028064.18	novel	3205	15	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	15.3888377251374	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	9674	False	NA	NA	False	ATTAAA	-23	NA	88363068	88343265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358775_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
ES.21841.2	chr3	-	3271	15	NIC	ENSMUSG00000028064.18	novel	3205	15	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	15.3888377251374	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTATGGCGTGCTGTG	9674	False	NA	NA	False	ATTAAA	-20	NA	88363068	88343268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358805_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
ES.21841.3	chr3	-	3299	16	NIC	ENSMUSG00000028064.18	novel	3205	15	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	15.207308184627	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTATGGCGTGCTGTG	9712	False	NA	NA	False	ATTAAA	-20	NA	88363030	88343268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362386_88362500_88362854
ES.21841.4	chr3	-	1949	5	NNC	ENSMUSG00000028064.18	novel	2108	5	NA	NA	135	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.3114846272641	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAGCTTATGGCGTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	88348311	88343272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345849_88348004
ES.21841.5	chr3	-	3238	15	FSM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	-40	7	-40	-4	multi-exon	FALSE	canonical	0	0	junction_13	15.169787374238	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAGCTTATGGCGTGC	9656	False	NA	NA	False	ATTAAA	-16	NA	88363086	88343272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
ES.21841.7	chr3	-	3069	14	NIC	ENSMUSG00000028064.18	novel	3205	15	NA	NA	-22	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	15.6772174804394	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAGCTTATGGCGTGC	9674	False	NA	NA	False	ATTAAA	-16	NA	88363068	88343272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358775_88358994_88359094_88359326_88359390_88360277_88360439_88362854
ES.21842.1	chr3	-	178	1	Intergenic	novelGene_18055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATAAAGAGAGACTTGG	5183	False	NA	NA	False	NA	NA	NA	88379279	88379101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88379100_88379300
ES.21843.1	chr3	+	161	1	Intergenic	novelGene_18056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATCTTTTTA	NA	False	NA	-12	True	NA	NA	NA	88395164	88395325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88395200_88395300
ES.21844.1	chr3	+	3445	1	Antisense	novelGene_ENSMUSG00000028063.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAATTATTGTGCTTGG	NA	False	NA	NA	False	AATAAA	-32	NA	88400256	88403701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_88400300_88403700
ES.21845.1	chr3	-	4133	13	NIC	ENSMUSG00000028063.16	novel	3156	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	4	junction_12	52.8716343819843	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	7860	False	NA	-3	True	AATACA	-19	NA	88417256	88388454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88411551_88417187
ES.21845.2	chr3	-	3129	14	NNC	ENSMUSG00000028063.16	novel	3156	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	58.328492332234	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCTGTGGTGTCTCTTT	7854	False	NA	-4	True	AATACA	-18	NA	88417262	88388455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410467_88411475_88411551_88417187
ES.21845.3	chr3	-	3154	12	NNC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_11	56.6893812844454	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGCCCTGGCCTTTC	7808	False	NA	-2	True	ATTAAA	-18	NA	88417308	88390512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88411551_88413750_88413828_88417187
ES.21845.5	chr3	-	5492	13	NNC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.7618072382385	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGCCCTGGCCTTTC	7844	False	NA	-2	True	ATTAAA	-18	NA	88417272	88390512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410694_88411475_88411551_88413750_88416334_88416537
ES.21845.6	chr3	-	2255	12	NIC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	55.0757554916427	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGCCCTGGCCTTTC	7848	False	NA	-2	True	ATTAAA	-18	NA	88417268	88390512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410694_88411475_88411551_88417187
ES.21845.7	chr3	-	4163	7	NIC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	2725	-2	combination_of_known_junctions	FALSE	canonical	3	100	junction_3	26.6755193638912	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGCCCTGGCCTT	NA	False	NA	-4	True	ATTAAA	-16	NA	88397894	88390514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88390721_88391133_88391254_88391353_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581
ES.21845.8	chr3	-	2348	13	NNC	ENSMUSG00000028063.16	novel	2021	10	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	61.7618072382385	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGCCCTGGCCTT	7830	False	NA	-4	True	ATTAAA	-16	NA	88417286	88390514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054_88410694_88411475_88411551_88413750_88413828_88417187
ES.21845.9	chr3	-	5319	1	Genic_Genomic	ENSMUSG00000028063.16	novel	NA	NA	NA	NA	-3630	-8418	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6133	False	NA	NA	False	TTTAAA	-8	NA	88404249	88398930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88398900_88404200
ES.21846.1	chr3	+	4048	1	Intergenic	novelGene_18057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88420835	88424883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88420800_88424900
ES.21847.1	chr3	+	222	1	Intergenic	novelGene_18058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACAACTAATATCA	1481	False	NA	NA	False	NA	NA	NA	88426278	88426500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88426300_88426500
ES.21848.1	chr3	-	5490	2	Genic_Genomic	ENSMUSG00000103115.2	novel	1290	1	NA	NA	-4228	3467	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTATTTGTTTTGTTT	8291	False	NA	NA	False	NA	NA	NA	88438890	88429905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88434572_88438066
ES.21848.2	chr3	-	5538	1	FSM	ENSMUSG00000103115.2	ENSMUST00000193595.2	1290	1	-4250	2	-4250	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCGGTGACCATTGATT	8269	False	NA	NA	False	AATAAA	-14	NA	88438912	88433374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88433400_88438900
ES.21849.1	chr3	+	6234	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-457	1	-457	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCTTTCACTGTGT	NA	False	NA	16	True	ATTAAA	-17	NA	88439244	88448702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88440156_88443379
ES.21849.2	chr3	+	2104	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-454	4128	-454	-4128	multi-exon	FALSE	canonical	3	19	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCTTGGAAATATTCA	NA	False	NA	NA	False	NA	NA	NA	88439247	88444575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88440156_88443379
ES.21849.3	chr3	+	4049	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-454	2183	-454	-2183	multi-exon	FALSE	canonical	3	19	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGAACCTGGGCTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	88439247	88446520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88440156_88443379
ES.21849.4	chr3	+	4243	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-454	1989	-454	-1989	multi-exon	FALSE	canonical	3	19	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGGTTTATGTTCTTTTT	NA	False	NA	NA	False	AATATA	-3	NA	88439247	88446714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88440156_88443379
ES.21849.5	chr3	+	5954	3	NNC	ENSMUSG00000074480.5	novel	5778	2	NA	NA	-449	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCTTGTCTTTCACT	NA	False	NA	12	True	ATTAAA	-42	NA	88439252	88448698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88440156_88443379_88443440_88443707
ES.21849.6	chr3	+	7193	1	NIC	ENSMUSG00000074480.5	novel	5778	2	NA	NA	1805	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCTTGTCTTTCACTG	386	False	NA	13	True	ATTAAA	-43	NA	88441506	88448699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88441500_88448700
ES.21849.7	chr3	+	3419	1	NIC	ENSMUSG00000074480.5	novel	5778	2	NA	NA	3391	-2192	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAATGTAGCAAAGAACC	1972	False	NA	NA	False	AATAAA	-15	NA	88443092	88446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88443100_88446500
ES.2185.1	chr1	-	157	1	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAATAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	190765596	190765439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_190765400_190765600
ES.21850.1	chr3	-	184	1	Intergenic	novelGene_18059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGTCTAATAATAATA	7552	False	NA	NA	False	NA	NA	NA	88453756	88453572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88453600_88453800
ES.21851.1	chr3	-	666	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	3	-1	3	1	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCACCTGCTTTCT	980	False	NA	-5	True	AATAAA	-15	NA	88460328	88457124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ES.21851.3	chr3	-	641	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	-73	0	-39	0	multi-exon	FALSE	canonical	3	112	junction_3	1254.14043161929	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1069	False	NA	-7	True	AATAAA	-13	NA	88460239	88457126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
ES.21851.4	chr3	-	615	4	NNC	ENSMUSG00000028062.16	novel	568	4	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	1222.12601641566	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1170	False	NA	-7	True	AATAAA	-13	NA	88460138	88457126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88457312_88458002_88458093_88459586_88459825_88460036
ES.21851.5	chr3	-	454	3	FSM	ENSMUSG00000028062.16	ENSMUST00000156421.2	438	3	-15	-1	-15	0	multi-exon	FALSE	canonical	3	32	junction_2	1321	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1093	False	NA	-7	True	AATAAA	-13	NA	88460215	88457126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88457312_88458002_88458093_88460036
ES.21851.6	chr3	-	424	3	NIC	ENSMUSG00000028062.16	novel	668	4	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	1306	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1057	False	NA	-7	True	AATAAA	-13	NA	88460251	88457126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88457312_88458002_88458093_88460102
ES.21851.7	chr3	-	569	4	NNC	ENSMUSG00000028062.16	novel	668	4	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	1207.16444612986	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTGTCTCACCTGCT	1085	False	NA	-9	True	AATAAA	-11	NA	88460223	88457128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88457312_88458002_88458093_88459649_88459825_88460102
ES.21851.8	chr3	-	421	2	FSM	ENSMUSG00000028062.16	ENSMUST00000145172.2	567	2	136	10	-45	-10	multi-exon	FALSE	canonical	3	2467	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAAGTGAGAGTAC	1063	False	NA	NA	False	AATAAA	-12	NA	88460245	88459546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88459825_88460102
ES.21852.1	chr3	+	3983	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-651	-2	-651	2	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTTTGTTTGTTGTT	5454	False	NA	NA	False	AATAAA	-28	NA	88460413	88477034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.10	chr3	+	3315	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_9	433.49750864336	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6076	False	NA	NA	False	AATAAA	-26	NA	88461035	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88473041_88473185_88475387
ES.21852.100	chr3	+	1149	6	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	-5	combination_of_known_splicesites	FALSE	canonical	2	148	junction_1	1835.41635603478	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGATGTGTTTGTCTTGC	NA	False	NA	10	True	AATAAA	-12	NA	88483113	88495721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.101	chr3	+	1271	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-44	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	2188.24524448244	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483138	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483689_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.102	chr3	+	1328	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	2280.3080618949	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483144	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.103	chr3	+	2133	8	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-33	-7	intron_retention	FALSE	canonical	1	1	junction_2	2301.64288263485	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCGATGTGTTTGTCTT	NA	False	NA	8	True	AATAAA	-10	NA	88483149	88495719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483288_88483545_88484504_88485595_88485660_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.104	chr3	+	1267	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-32	69	intron_retention	FALSE	canonical	3	133	junction_2	2263.70762336518	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCCGAACTCAACCAGAA	NA	False	NA	NA	False	NA	NA	NA	88483150	88495409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.105	chr3	+	1412	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	105	junction_2	2165.91308048643	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483219	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.106	chr3	+	4453	6	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	133	junction_1	1841.35797714621	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	NA	False	NA	12	True	AATAAA	-14	NA	88483219	88495723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483911_88484401_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.107	chr3	+	1294	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	2270.95379584375	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483220	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483689_88483806_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.108	chr3	+	1548	9	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_3	2319.18522532699	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483221	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483288_88483545_88483911_88484401_88484504_88485148_88485184_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.109	chr3	+	2712	2	ISM	ENSMUSG00000041355.14	ENSMUST00000193069.2	495	5	-14	1089	-14	-1082	intron_retention	FALSE	canonical	3	143	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	88483231	88486201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88483288_88483545
ES.21852.11	chr3	+	1640	4	ISM	ENSMUSG00000008604.12	ENSMUST00000194303.6	1379	6	-32	5800	-26	922	5prime_fragment	FALSE	canonical	3	1484	junction_2	90.038263471087	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGAATGGTCAATACCC	6079	False	NA	NA	False	NA	NA	NA	88461038	88465067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963
ES.21852.110	chr3	+	1275	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2285.96042424721	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483236	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483689_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.111	chr3	+	4394	6	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	2	-6	intron_retention	FALSE	canonical	3	43	junction_1	1877.01550339895	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	False	NA	9	True	AATAAA	-11	NA	88483247	88495720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483806_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.112	chr3	+	4659	6	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	143	junction_1	1837.39685424788	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483248	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.113	chr3	+	1121	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	2187.25036035861	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483248	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.114	chr3	+	1636	6	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	3	-6	intron_retention	FALSE	canonical	3	105	junction_1	1852.45001012173	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	False	NA	9	True	AATAAA	-11	NA	88483248	88495720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.115	chr3	+	224	2	NNC	ENSMUSG00000041355.14	novel	494	3	NA	NA	-2	1697	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTGTGTATGTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	88483253	88497423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483421_88497366
ES.21852.116	chr3	+	1467	8	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	3	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	2286.9294359245	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	False	NA	9	True	AATAAA	-11	NA	88483258	88495720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483288_88483545_88483911_88484401_88484504_88487189_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.117	chr3	+	2158	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	-1099	0	-1099	0	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	2458	False	NA	15	True	AATAAA	-17	NA	88485815	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.118	chr3	+	3028	7	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	2182.98094484481	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3570	False	NA	15	True	AATAAA	-17	NA	88486927	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488973_88489518_88489833_88490008_88491193_88494171_88494250_88495187
ES.21852.119	chr3	+	1147	6	NNC	ENSMUSG00000041355.14	novel	620	6	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1875.17529847212	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	3570	False	NA	11	True	AATAAA	-13	NA	88486927	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488346_88490944_88491193_88494171_88494250_88495187
ES.21852.120	chr3	+	2737	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	21	-1699	-12	1699	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTGTATGTGTGTG	3578	False	NA	NA	False	ATTAAA	-26	NA	88486935	88497425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.121	chr3	+	1017	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1786.0104814922	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	3587	False	NA	11	True	AATAAA	-13	NA	88486944	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494242_88495187
ES.21852.122	chr3	+	1021	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1849.71528619947	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	3588	False	NA	11	True	AATAAA	-13	NA	88486945	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491190_88494171_88494250_88495187
ES.21852.126	chr3	+	1013	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2268.57140949982	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3591	False	NA	12	True	AATAAA	-14	NA	88486948	88495723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488374_88491083_88491190_88494171_88494250_88495187
ES.21852.127	chr3	+	1015	6	NNC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1868.97280879097	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	3591	False	NA	11	True	AATAAA	-13	NA	88486948	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88486994_88487186_88487342_88488280_88488380_88491089_88491193_88494171_88494250_88495187
ES.21852.128	chr3	+	908	5	NIC	ENSMUSG00000041355.14	novel	1059	6	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2029.86212585978	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCGATGTGTTTGTCTT	3592	False	NA	8	True	AATAAA	-10	NA	88486949	88495719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88486994_88487186_88487342_88488280_88488380_88494171_88494250_88495187
ES.21852.129	chr3	+	3190	5	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	147	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2096.66407657498	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3767	False	NA	12	True	AATAAA	-14	NA	88487124	88495723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88487342_88488280_88489406_88489958_88491193_88494171_88494250_88495187
ES.21852.13	chr3	+	2020	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-24	1334	-24	-1334	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTCCAAGGATTTTG	6081	False	NA	NA	False	NA	NA	NA	88461040	88475698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.130	chr3	+	971	5	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	208	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2298.91893071504	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3828	False	NA	14	True	AATAAA	-16	NA	88487185	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88487342_88488280_88488380_88491083_88491190_88494171_88494244_88495187
ES.21852.131	chr3	+	4639	4	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	208	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2335.53310592868	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	3828	False	NA	14	True	AATAAA	-16	NA	88487185	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88487342_88488280_88489275_88491298_88494250_88495187
ES.21852.132	chr3	+	1132	5	NNC	ENSMUSG00000041355.14	novel	560	5	NA	NA	369	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2023.01563266328	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTTTGTCTTGCGT	3989	False	NA	12	True	AATAAA	-14	NA	88487346	88495723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88487657_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.133	chr3	+	850	5	NNC	ENSMUSG00000041355.14	novel	560	5	NA	NA	825	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2023.01563266328	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	4445	False	NA	11	True	AATAAA	-13	NA	88487802	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88487832_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.134	chr3	+	922	4	ISM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	1202	4	1202	-4	3prime_fragment	FALSE	canonical	3	4285	junction_1	307.372014919308	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	4822	False	NA	11	True	AATAAA	-13	NA	88488179	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.14	chr3	+	3382	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	441.31268959775	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6081	False	NA	NA	False	AATAAA	-25	NA	88461040	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.15	chr3	+	4509	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	1317	junction_8	120.161804975624	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6082	False	NA	NA	False	AATAAA	-24	NA	88461041	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472636_88472997_88473185_88475387
ES.21852.16	chr3	+	3308	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-23	-8	intron_retention	FALSE	canonical	3	52	junction_4	478.788510200485	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTATATTGGTGGTTT	6082	False	NA	NA	False	AATAAA	-18	NA	88461041	88477024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471676_88471817_88472313_88472636_88472997_88473185_88475387
ES.21852.18	chr3	+	3363	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	442.864866522509	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATATTGGTGGTTTGTTT	6083	False	NA	NA	False	AATAAA	-22	NA	88461042	88477028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475372
ES.21852.19	chr3	+	4349	8	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	52	junction_4	508.540127447667	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6083	False	NA	NA	False	AATAAA	-24	NA	88461042	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88471817_88472313_88472636_88472997_88473185_88475387
ES.21852.2	chr3	+	3323	12	NNC	ENSMUSG00000008604.12	novel	362	2	NA	NA	-632	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	542.5133124771	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	5473	False	NA	NA	False	AATAAA	-25	NA	88460432	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88460520_88462340_88462403_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.20	chr3	+	3188	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	451.412707063908	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6088	False	NA	NA	False	AATAAA	-26	NA	88461047	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.21	chr3	+	5773	6	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-14	-8	intron_retention	FALSE	canonical	1	8	junction_4	617.707244574645	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTATATTGGTGGTTT	6091	False	NA	NA	False	AATAAA	-18	NA	88461050	88477024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88471676_88472636_88472997
ES.21852.22	chr3	+	1407	6	FSM	ENSMUSG00000008604.12	ENSMUST00000194303.6	1379	6	-20	-8	-14	8	multi-exon	FALSE	canonical	3	1330	junction_4	125.024797540328	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATGTCTGATACCAT	6091	False	NA	NA	False	AATAAA	-23	NA	88461050	88470875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414
ES.21852.24	chr3	+	3115	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	454.125288634951	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6093	False	NA	NA	False	AATAAA	-25	NA	88461052	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.25	chr3	+	3185	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	600.485441482222	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATATTGGTGGTTTGTTT	6093	False	NA	NA	False	AATAAA	-22	NA	88461052	88477028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471670_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.27	chr3	+	1834	4	NNC	ENSMUSG00000008604.12	novel	1379	6	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	748.655238856088	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTATATTGGTGGTTT	6095	False	NA	NA	False	AATAAA	-18	NA	88461054	88477024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463174_88475584
ES.21852.28	chr3	+	6578	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	1295	junction_7	123.067499263615	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6095	False	NA	NA	False	AATAAA	-25	NA	88461054	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.29	chr3	+	2971	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	440.90104149918	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6095	False	NA	NA	False	AATAAA	-23	NA	88461054	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461089_88463179_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.3	chr3	+	3577	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-126	-1	intron_retention	FALSE	canonical	3	1317	junction_9	113.299995096597	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	5979	False	NA	NA	False	AATAAA	-25	NA	88460938	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472636_88472997_88473185_88475387
ES.21852.30	chr3	+	5315	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	35	junction_5	481.415036636788	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6096	False	NA	NA	False	AATAAA	-25	NA	88461055	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88471676_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.31	chr3	+	2670	8	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	486.312488771051	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATATTGGTGGTTTGT	6097	False	NA	NA	False	AATAAA	-20	NA	88461056	88477026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461176_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.33	chr3	+	3235	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_7	547.943391236723	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6107	False	NA	NA	False	AATAAA	-25	NA	88461066	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472341_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.34	chr3	+	4392	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_4	462.504774750128	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6108	False	NA	NA	False	AATAAA	-26	NA	88461067	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.35	chr3	+	3823	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	440.257697263773	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6109	False	NA	NA	False	AATAAA	-25	NA	88461068	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471178_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.36	chr3	+	5784	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1295	junction_6	86.693335239798	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6111	False	NA	NA	False	AATAAA	-25	NA	88461070	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.37	chr3	+	3297	12	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	650.428123470728	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6111	False	NA	NA	False	AATAAA	-25	NA	88461070	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464223_88465896_88465955_88466924_88467004_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.39	chr3	+	3311	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	439.225784762234	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTTTGTTTGTTGT	6111	False	NA	NA	False	AATAAA	-27	NA	88461070	88477033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463110_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.4	chr3	+	3358	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_7	435.808317956415	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6048	False	NA	NA	False	AATAAA	-25	NA	88461007	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472341_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.40	chr3	+	4293	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	62	junction_1	424.777327287813	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6111	False	NA	NA	False	AATAAA	-23	NA	88461070	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.41	chr3	+	6653	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1295	junction_7	118.447779815452	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6112	False	NA	NA	False	AATAAA	-25	NA	88461071	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.43	chr3	+	2937	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	489.884106192475	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6112	False	NA	NA	False	AATAAA	-25	NA	88461071	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.44	chr3	+	3237	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	443.2145755726	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATATTGGTGGTTTGT	6112	False	NA	NA	False	AATAAA	-20	NA	88461071	88477026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467004_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.47	chr3	+	3078	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	464.752848163993	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6115	False	NA	NA	False	AATAAA	-23	NA	88461074	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88471689_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.48	chr3	+	4363	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	4	-6	intron_retention	FALSE	canonical	0	0	junction_5	464.752848163993	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATATTGGTGGTTTGT	6115	False	NA	NA	False	AATAAA	-20	NA	88461074	88477026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467097_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.5	chr3	+	3317	11	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	406.990417577613	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6053	False	NA	NA	False	AATAAA	-25	NA	88461012	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.50	chr3	+	3327	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	443.504780132075	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6118	False	NA	NA	False	AATAAA	-23	NA	88461077	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467097_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.51	chr3	+	7682	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	1295	junction_6	125.632400279546	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6120	False	NA	NA	False	AATAAA	-26	NA	88461079	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.52	chr3	+	4169	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	11	2068	intron_retention	FALSE	canonical	3	1295	junction_7	123.067499263615	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCGGCACCTCTCAGA	6122	False	NA	NA	False	NA	NA	NA	88461081	88474649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.53	chr3	+	2165	5	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	664.399917218538	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6123	False	NA	NA	False	AATAAA	-24	NA	88461082	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462768_88472560_88472636_88472997_88473185_88475387
ES.21852.54	chr3	+	3383	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	12	-3	intron_retention	FALSE	canonical	3	35	junction_4	475.253468556517	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6123	False	NA	NA	False	AATAAA	-23	NA	88461082	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88463300_88463963_88464227_88466924_88467084_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.55	chr3	+	5273	9	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_5	492.64437921791	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6123	False	NA	NA	False	AATAAA	-23	NA	88461082	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88471689_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.56	chr3	+	4032	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	12	-316	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTGCCTTTCAGTTAT	6123	False	NA	NA	False	NA	NA	NA	88461082	88476716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.57	chr3	+	3117	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	439.225784762234	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6123	False	NA	NA	False	AATAAA	-25	NA	88461082	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88464157_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.59	chr3	+	2840	9	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	457.703984579553	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6126	False	NA	NA	False	AATAAA	-25	NA	88461085	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461181_88464037_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.6	chr3	+	2717	15	Fusion	ENSMUSG00000041355.14_ENSMUSG00000008604.12	novel	3330	11	NA	NA	-51	1	multi-exon	FALSE	canonical	2	28	junction_10	1586.5661305898	2441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	6054	False	NA	16	True	AATAAA	-18	NA	88461013	88495727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.60	chr3	+	3300	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	439.225784762234	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATATTGGTGGTTTGTT	6126	False	NA	NA	False	AATAAA	-21	NA	88461085	88477027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462801_88463104_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.61	chr3	+	3433	5	ISM	ENSMUSG00000008604.12	ENSMUST00000194303.6	1379	6	16	1261	-16	-1261	5prime_fragment	FALSE	canonical	3	1330	junction_4	122.326152150716	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGAGGGGGGCTCCAG	6127	False	NA	NA	False	AATAAA	-15	NA	88461086	88469606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924
ES.21852.62	chr3	+	4732	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	1295	junction_7	82.8257131899997	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6127	False	NA	NA	False	AATAAA	-25	NA	88461086	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.63	chr3	+	2955	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	456.723914827109	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTTTGTTTGTTGTT	6127	False	NA	NA	False	AATAAA	-28	NA	88461086	88477034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.64	chr3	+	3505	12	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	556.825328340039	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6128	False	NA	NA	False	AATAAA	-24	NA	88461087	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88470805_88471006_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.65	chr3	+	4310	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_4	605.995558798867	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6128	False	NA	NA	False	AATAAA	-25	NA	88461087	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464223_88466924_88467084_88470414_88471817_88472341_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.66	chr3	+	3324	12	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	556.136807593537	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6129	False	NA	NA	False	AATAAA	-25	NA	88461088	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463498_88463518_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.67	chr3	+	6659	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_4	467.252013847393	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6131	False	NA	NA	False	AATAAA	-25	NA	88461090	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464223_88466895_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.68	chr3	+	6653	8	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	1329	junction_6	119.140287742079	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6140	False	NA	NA	False	AATAAA	-23	NA	88461099	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472636_88472997
ES.21852.69	chr3	+	3440	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	8	junction_4	465.17980062937	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6145	False	NA	NA	False	AATAAA	-25	NA	88461104	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88470641_88471676_88471817_88472313_88472636_88472997_88473185_88475387
ES.21852.7	chr3	+	5571	10	ISM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	-39	1	-39	-1	intron_retention	FALSE	canonical	3	1295	junction_8	116.031072892321	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	6066	False	NA	NA	False	AATAAA	-25	NA	88461025	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.70	chr3	+	3065	10	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	464.752848163993	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGATTATATTGGTGGT	6147	False	NA	NA	False	AATAAA	-16	NA	88461106	88477022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467097_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.71	chr3	+	3270	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	443.736678673287	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	6149	False	NA	NA	False	AATAAA	-24	NA	88461108	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473171_88475387
ES.21852.72	chr3	+	3268	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	581.821286994555	1546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATATTGGTGGTTTGTT	6149	False	NA	NA	False	AATAAA	-21	NA	88461108	88477027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472341_88472398_88472519_88472636_88472997_88473185_88475372
ES.21852.73	chr3	+	5497	10	NNC	ENSMUSG00000008604.12	novel	362	2	NA	NA	145	1	intron_retention	FALSE	canonical	1	24	junction_1	440.284279657564	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTTTGTTTGTTGT	6288	False	NA	NA	False	AATAAA	-27	NA	88461247	88477033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461366_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.74	chr3	+	3267	11	NNC	ENSMUSG00000008604.12	novel	362	2	NA	NA	171	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_1	418.18173083003	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6314	False	NA	NA	False	AATAAA	-26	NA	88461273	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461366_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.75	chr3	+	3198	11	NNC	ENSMUSG00000008604.12	novel	362	2	NA	NA	281	-3	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	419.360417779265	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	6424	False	NA	NA	False	AATAAA	-23	NA	88461383	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88461410_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.76	chr3	+	1131	1	Intergenic	novelGene_18060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGAGGGTCAAGTCTT	6484	False	NA	NA	False	NA	NA	NA	88461443	88462574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88461400_88462600
ES.21852.77	chr3	+	3980	8	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	352	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_3	496.781477849863	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6495	False	NA	NA	False	AATAAA	-26	NA	88461454	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88462797_88463096_88463300_88463963_88464227_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.78	chr3	+	4959	9	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	819	-4	intron_retention	FALSE	canonical	3	8	junction_3	466.863587544585	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATATTGGTGGTTTGTTT	6962	False	NA	NA	False	AATAAA	-22	NA	88461921	88477028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.79	chr3	+	3460	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-1353	-3	intron_retention	FALSE	canonical	3	1295	junction_6	80.9687439695096	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	7697	False	NA	NA	False	AATAAA	-23	NA	88462656	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.8	chr3	+	4399	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-33	0	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6072	False	NA	NA	False	AATAAA	-26	NA	88461031	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.80	chr3	+	2659	7	ISM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	5757	1	2812	-1	3prime_fragment	FALSE	canonical	3	1295	junction_4	80.5081086323331	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	88466821	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.81	chr3	+	6895	5	ISM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	7053	3	-3096	-3	intron_retention	FALSE	canonical	3	1295	junction_3	90.5714496958065	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTGGTGGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	88468117	88477029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.82	chr3	+	7822	4	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-2986	-2	intron_retention	FALSE	canonical	3	1295	junction_2	101.831014703555	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	88468227	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88471817_88472313_88472398_88472519_88472636_88472997
ES.21852.83	chr3	+	6349	3	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-1389	0	intron_retention	FALSE	canonical	3	1329	junction_1	98.5	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	NA	False	NA	NA	False	AATAAA	-26	NA	88469824	88477032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88471817_88472313_88472636_88472997
ES.21852.84	chr3	+	7051	1	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	-1234	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1543	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGGTGGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	88469979	88477030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88470000_88477000
ES.21852.85	chr3	+	2420	4	ISM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	10860	1	711	-1	3prime_fragment	FALSE	canonical	3	1295	junction_1	104.097176821575	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGGTGGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	88471924	88477031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88472398_88472519_88472636_88472997_88473185_88475387
ES.21852.86	chr3	+	2141	8	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-1929	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2330.21904900087	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGATGTGTTTGTCTTGC	NA	False	NA	10	True	AATAAA	-12	NA	88481253	88495721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88481420_88484659_88484706_88485853_88486808_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.87	chr3	+	1317	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-132	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	2189.39274305304	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	NA	False	NA	11	True	AATAAA	-13	NA	88483050	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483806_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.88	chr3	+	4694	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-85	1	intron_retention	FALSE	canonical	3	123	junction_2	2161.67515418534	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTGCGTCAAC	NA	False	NA	16	True	AATAAA	-18	NA	88483097	88495727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483689_88483806_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.89	chr3	+	3536	6	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-83	-4	intron_retention	FALSE	canonical	3	42	junction_1	1877.41177156212	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	NA	False	NA	11	True	AATAAA	-13	NA	88483099	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88485660_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.90	chr3	+	1537	9	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-75	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	2319.37469684719	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	NA	False	NA	11	True	AATAAA	-13	NA	88483107	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483288_88483545_88483689_88483806_88483911_88485049_88485184_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.91	chr3	+	5059	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	-3870	0	-75	0	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483107	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.92	chr3	+	1665	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-75	0	intron_retention	FALSE	canonical	3	105	junction_2	2170.57814239023	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483107	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483689_88483806_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.93	chr3	+	3129	8	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-70	-22	intron_retention	FALSE	canonical	3	42	junction_3	2281.45548780973	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACAAATGCCATAC	NA	False	NA	-7	True	AATGAA	-7	NA	88483112	88495704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483288_88483545_88483689_88483806_88485660_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.94	chr3	+	1502	9	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	-1	combination_of_known_junctions	FALSE	canonical	3	123	junction_2	2287.5892571384	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTGTCTTGCGTCA	NA	False	NA	14	True	AATAAA	-16	NA	88483113	88495725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.95	chr3	+	1879	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	0	intron_retention	FALSE	canonical	3	133	junction_1	2160.26220759323	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483113	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.96	chr3	+	1240	8	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2313.51121078956	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGATGTGTTTGTCTTGCG	NA	False	NA	11	True	AATAAA	-13	NA	88483113	88495722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483155_88483545_88483689_88483830_88483911_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.97	chr3	+	4304	7	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	0	intron_retention	FALSE	canonical	3	133	junction_2	2159.32616161205	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	NA	False	NA	15	True	AATAAA	-17	NA	88483113	88495726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483288_88483545_88483911_88484401_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.98	chr3	+	1739	8	NIC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	-22	intron_retention	FALSE	canonical	3	123	junction_1	2266.99422503158	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACAAATGCCATAC	NA	False	NA	-7	True	AATGAA	-7	NA	88483113	88495704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88483689_88483806_88483911_88484401_88484504_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21852.99	chr3	+	2520	9	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	-69	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2317.80097492753	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	False	NA	9	True	AATAAA	-11	NA	88483113	88495720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88483155_88483545_88483689_88483806_88483911_88484401_88485660_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ES.21853.1	chr3	-	171	1	Intergenic	novelGene_18061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAATTTCCAT	NA	False	NA	NA	False	NA	NA	NA	88466694	88466523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88466500_88466700
ES.21854.1	chr3	-	2342	1	Antisense	novelGene_ENSMUSG00000008604.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTCCAGCTGCTGTTG	4138	False	NA	NA	False	AATAAA	-14	NA	88477773	88475431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88475400_88477800
ES.21855.1	chr3	-	2845	1	FSM	ENSMUSG00000074479.4	ENSMUST00000098952.4	730	1	-424	-1691	-424	1691	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTAACTTCTAAGCC	8403	False	NA	NA	False	NA	NA	NA	88484870	88482025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88482000_88484900
ES.21855.2	chr3	-	179	1	Intergenic	novelGene_18062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTGATC	NA	False	NA	-27	True	NA	NA	NA	88482801	88482622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88482600_88482800
ES.21855.3	chr3	-	1055	9	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-10965	468	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGTCTTTGGCCTCAG	8195	False	NA	NA	False	NA	NA	NA	88495411	88483248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88483287_88483544_88483687_88483804_88483909_88484399_88484501_88487183_88487336_88488274_88488380_88491083_88491192_88494170_88494250_88495185
ES.21855.4	chr3	-	4329	5	Genic_Genomic	ENSMUSG00000074479.4	novel	730	1	NA	NA	-10965	193	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCCACCTGCTTCTGCC	8195	False	NA	NA	False	AATAAA	-40	NA	88495411	88483523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88487336_88488274_88488380_88491083_88491192_88494170_88494249_88495185
ES.21855.7	chr3	-	174	1	Intergenic	novelGene_18063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATAACTG	9413	False	NA	NA	False	NA	NA	NA	88489190	88489016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88489000_88489200
ES.21856.1	chr3	+	4792	27	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-15327	0	intron_retention	FALSE	canonical	0	0	junction_1	122.970218167705	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88497945	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88497976_88513333_88513621_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.10	chr3	+	4622	25	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-5	0	intron_retention	FALSE	canonical	3	23	junction_1	95.1426469249668	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	905	False	NA	15	True	ATTAAA	-17	NA	88514960	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.100	chr3	+	4195	22	NNC	ENSMUSG00000028059.17	novel	735	6	NA	NA	283	0	intron_retention	FALSE	canonical	0	0	junction_1	75.14258555084	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88529144	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88529258_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.101	chr3	+	4083	21	ISM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	8493	1	214	1	3prime_fragment	FALSE	canonical	3	271	junction_3	26.733686614457	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	4353	False	NA	12	True	ATTAAA	-14	NA	88537091	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.102	chr3	+	2746	19	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	10838	1117	78	2	3prime_fragment	FALSE	canonical	3	121	junction_1	52.1559863637938	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	2210	False	NA	11	True	AGTAAA	-17	NA	88539580	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.103	chr3	+	4178	15	NNC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	248	2	intron_retention	FALSE	canonical	0	0	junction_4	88.1665862942164	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	4507	False	NA	11	True	AGTAAA	-17	NA	88541877	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88543537_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.104	chr3	+	4186	11	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	1579	1478	intron_retention	FALSE	canonical	0	0	junction_2	99.636138022306	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGTGAGTTGGGTG	5838	False	NA	NA	False	ATTAAA	-18	NA	88543208	88556837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88543411_88545577_88545655_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.105	chr3	+	3323	10	NIC	ENSMUSG00000028059.17	novel	4238	22	NA	NA	3406	0	intron_retention	FALSE	canonical	3	296	junction_6	26.2019695801011	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	7665	False	NA	11	True	ATTAAA	-13	NA	88545035	88555355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.106	chr3	+	2796	11	ISM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	16713	-2	3826	0	3prime_fragment	FALSE	canonical	3	296	junction_7	24.8638291499922	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8085	False	NA	13	True	ATTAAA	-15	NA	88545455	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.107	chr3	+	4673	4	NIC	ENSMUSG00000028059.17	novel	4390	22	NA	NA	214	0	intron_retention	FALSE	canonical	3	296	junction_2	37.249906785864	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88549946	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88550524_88550651_88550688_88550868_88553668_88554096
ES.21856.108	chr3	+	5781	1	Genic_Genomic	ENSMUSG00000028059.17	novel	NA	NA	NA	NA	-180	1480	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGAGTTGGGTGAT	NA	False	NA	NA	False	ATTAAA	-20	NA	88551058	88556839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_88551100_88556800
ES.21856.11	chr3	+	3283	18	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-5	0	intron_retention	TRUE	non_canonical	0	0	junction_10	136.751814699219	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	905	False	NA	11	True	ATTAAA	-13	NA	88514960	88555355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540812_88540848_88549890_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.12	chr3	+	3494	25	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-3	3	intron_retention	FALSE	canonical	3	23	junction_1	101.103486243332	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTGATTGTCCTTAC	907	False	NA	12	True	AGTAAA	-18	NA	88514962	88554239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.13	chr3	+	753	5	FSM	ENSMUSG00000028059.17	ENSMUST00000175749.8	624	5	34	-163	34	1	multi-exon	FALSE	canonical	0	0	junction_4	51.9344538817922	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGAACTCTTGATTCTT	944	False	NA	NA	False	NA	NA	NA	88514999	88524809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88524555
ES.21856.14	chr3	+	3454	25	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	40	0	intron_retention	FALSE	canonical	3	23	junction_1	95.1426469249668	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	950	False	NA	9	True	AGTAAA	-15	NA	88515005	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.15	chr3	+	3291	24	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	11	3	intron_retention	FALSE	canonical	3	26	junction_1	78.3930043945008	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTGATTGTCCTTAC	7683	False	NA	12	True	AGTAAA	-18	NA	88521738	88554239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.16	chr3	+	4350	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_1	85.2752955612459	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	7696	False	NA	13	True	ATTAAA	-15	NA	88521751	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88521932_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.17	chr3	+	3353	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	24	6	intron_retention	FALSE	canonical	2	8	junction_7	100.939512203928	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGATTGTCCTTACCAG	7696	False	NA	15	True	AGTAAA	-21	NA	88521751	88554242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540601_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.18	chr3	+	4282	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-32	0	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8586	False	NA	15	True	ATTAAA	-17	NA	88522641	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.19	chr3	+	4271	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-31	0	intron_retention	FALSE	canonical	3	13	junction_1	88.4969214378091	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	8587	False	NA	11	True	ATTAAA	-13	NA	88522642	88555355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.2	chr3	+	3843	27	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-12838	3	intron_retention	FALSE	canonical	2	3	junction_1	119.305094699689	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTGATTGTCCTTAC	NA	False	NA	12	True	AGTAAA	-18	NA	88500434	88554239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88500630_88513333_88513621_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.20	chr3	+	4364	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-31	0	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8587	False	NA	15	True	ATTAAA	-17	NA	88522642	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.21	chr3	+	3843	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-31	5	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCATATCTTTGAACT	8587	False	NA	NA	False	TTTAAA	-20	NA	88522642	88554844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.22	chr3	+	4287	22	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-30	54	intron_retention	FALSE	canonical	0	0	junction_5	86.0043768332003	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTCGTTTGCATCTT	8588	False	NA	69	True	AATGAA	-42	NA	88522643	88555413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.23	chr3	+	4355	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-30	0	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8588	False	NA	13	True	ATTAAA	-15	NA	88522643	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.24	chr3	+	3229	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-17	2	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	8601	False	NA	11	True	AGTAAA	-17	NA	88522656	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.25	chr3	+	3146	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	2	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	8601	False	NA	11	True	AGTAAA	-17	NA	88522656	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.26	chr3	+	5081	23	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	1	intron_retention	FALSE	canonical	0	0	junction_12	118.984312112671	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	8601	False	NA	12	True	ATTAAA	-14	NA	88522656	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545621_88545655_88546629_88547446_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.27	chr3	+	4591	22	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	0	intron_retention	FALSE	canonical	3	13	junction_1	83.9824244651678	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8601	False	NA	15	True	ATTAAA	-17	NA	88522656	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.28	chr3	+	3144	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	6	intron_retention	FALSE	canonical	3	13	junction_1	88.4969214378091	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGATTGTCCTTACCAG	8601	False	NA	15	True	AGTAAA	-21	NA	88522656	88554242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.29	chr3	+	4235	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_1	103.94081855467	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8601	False	NA	13	True	ATTAAA	-15	NA	88522656	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522802_88522829_88523877_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.3	chr3	+	4909	27	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-12784	0	intron_retention	FALSE	canonical	2	3	junction_1	119.305094699689	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88500488	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88500630_88513333_88513621_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.30	chr3	+	5732	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-16	1478	intron_retention	FALSE	canonical	0	0	junction_17	101.290127757331	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGTGAGTTGGGTG	8602	False	NA	NA	False	ATTAAA	-18	NA	88522657	88556837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549928_88550238_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.31	chr3	+	5704	23	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-10	1480	intron_retention	FALSE	non_canonical	0	0	junction_1	85.2752955612459	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGAGTTGGGTGAT	8608	False	NA	NA	False	ATTAAA	-20	NA	88522663	88556839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522706_88523857_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.32	chr3	+	5787	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	23	1477	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGTTGTGAGTTGGGT	8641	False	NA	NA	False	ATTAAA	-17	NA	88522696	88556836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.34	chr3	+	3175	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	33	4	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTCCTTACC	8651	False	NA	13	True	AGTAAA	-19	NA	88522706	88554240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.35	chr3	+	4609	23	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	34	1	intron_retention	FALSE	canonical	0	0	junction_20	110.085053518924	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	8652	False	NA	12	True	ATTAAA	-14	NA	88522707	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88551722_88551827_88553483_88553668_88554096
ES.21856.36	chr3	+	4501	22	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	42	-1	intron_retention	FALSE	canonical	3	134	junction_1	53.41392720113	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTGGAAATGAAGC	8660	False	NA	10	True	ATTAAA	-12	NA	88522715	88555354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.37	chr3	+	4249	23	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_1	75.8299533046264	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8662	False	NA	15	True	ATTAAA	-17	NA	88522717	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522789_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.38	chr3	+	4178	22	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_6	85.9672721568282	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8663	False	NA	15	True	ATTAAA	-17	NA	88522718	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.4	chr3	+	4851	26	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	7	junction_1	108.740983994076	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTGGAAATGAAGC	NA	False	NA	10	True	ATTAAA	-12	NA	88513245	88555354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88513621_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.40	chr3	+	5544	22	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	60	0	intron_retention	FALSE	canonical	0	0	junction_19	106.378543691024	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	8678	False	NA	9	True	AGTAAA	-15	NA	88522733	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88551722_88551827_88553483_88553668_88554096
ES.21856.41	chr3	+	3764	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	62	13	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGAACTTGAGGAAT	8680	False	NA	NA	False	TTTAAA	-28	NA	88522735	88554852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.42	chr3	+	3114	23	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	63	0	intron_retention	FALSE	canonical	0	0	junction_13	91.012361797725	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	8681	False	NA	9	True	AGTAAA	-15	NA	88522736	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546656_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.44	chr3	+	4360	24	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_2	102.149432775014	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8709	False	NA	13	True	ATTAAA	-15	NA	88522764	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522829_88523867_88523962_88536750_88536871_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.45	chr3	+	4207	23	NNC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_11	83.8193650084109	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8709	False	NA	13	True	ATTAAA	-15	NA	88522764	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543194_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.46	chr3	+	4582	21	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	92	0	intron_retention	FALSE	canonical	3	121	junction_5	68.8000726743802	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8710	False	NA	15	True	ATTAAA	-17	NA	88522765	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.47	chr3	+	4390	23	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	316	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.8299533046264	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	8934	False	NA	13	True	ATTAAA	-15	NA	88522989	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523169_88523832_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.48	chr3	+	4265	23	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-368	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.8299533046264	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9026	False	NA	15	True	ATTAAA	-17	NA	88523081	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523169_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.49	chr3	+	3473	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	-98	1117	-98	6	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGATTGTCCTTACCAG	9296	False	NA	15	True	AGTAAA	-21	NA	88523351	88554242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.5	chr3	+	3738	26	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	394	4	intron_retention	FALSE	non_canonical	0	0	junction_1	125.338875054789	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTCCTTACC	NA	False	NA	13	True	AGTAAA	-19	NA	88513666	88554240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88514049_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550924_88551100_88551541_88553483_88553668_88554096
ES.21856.50	chr3	+	4554	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	-6	-56	-6	56	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCGTTTGCATCTTAT	9388	False	NA	71	True	AATGAA	-44	NA	88523443	88555415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.51	chr3	+	3365	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	2	599	2	4	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTCCTTACC	9396	False	NA	13	True	AGTAAA	-19	NA	88523451	88554240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.52	chr3	+	4439	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	47	-520	47	0	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9441	False	NA	15	True	ATTAAA	-17	NA	88523496	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.53	chr3	+	4658	22	NIC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	49	0	intron_retention	FALSE	canonical	3	97	junction_1	59.6951818761701	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9443	False	NA	15	True	ATTAAA	-17	NA	88523498	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.54	chr3	+	3404	24	NNC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	66	2	intron_retention	FALSE	canonical	0	0	junction_2	104.903880750892	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	9460	False	NA	11	True	AGTAAA	-17	NA	88523515	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523764_88523867_88523962_88524130_88524230_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.56	chr3	+	5904	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	66	-1478	66	1478	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGTGAGTTGGGTG	9460	False	NA	NA	False	ATTAAA	-18	NA	88523515	88556837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.57	chr3	+	4202	24	NNC	ENSMUSG00000028059.17	novel	3966	23	NA	NA	67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	93.492455949508	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTGGAAATGAAGC	9461	False	NA	10	True	ATTAAA	-12	NA	88523516	88555354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551283_88551494_88551541_88553483_88553668_88554096
ES.21856.58	chr3	+	4759	21	NIC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	73	-3	intron_retention	FALSE	canonical	3	97	junction_1	60.9657895872759	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAAGGCTGGAAATGAA	9467	False	NA	8	True	ATTAAA	-10	NA	88523522	88555352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.59	chr3	+	4134	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	73	285	73	235	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCCATTTGTCTGCAAA	9467	False	NA	NA	False	NA	NA	NA	88523522	88555074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.6	chr3	+	4505	26	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-363	0	intron_retention	FALSE	canonical	0	0	junction_1	109.45355179253	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	342	False	NA	15	True	ATTAAA	-17	NA	88514397	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88514422_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.60	chr3	+	4520	22	NIC	ENSMUSG00000028059.17	novel	3966	23	NA	NA	73	0	intron_retention	FALSE	canonical	3	97	junction_1	72.2286932387962	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	9467	False	NA	13	True	ATTAAA	-15	NA	88523522	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.61	chr3	+	3892	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	73	1	73	-1	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTAGCTCCATATCTT	9467	False	NA	NA	False	TTTAAA	-14	NA	88523522	88554838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.62	chr3	+	4747	21	NIC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	74	5	intron_retention	FALSE	canonical	3	97	junction_1	61.1099623629405	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAAGCGCCGTTCAGC	9468	False	NA	20	True	ATTAAA	-22	NA	88523523	88555364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.63	chr3	+	4080	22	NIC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	79	0	intron_retention	FALSE	canonical	3	97	junction_1	59.6925228057214	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	9473	False	NA	9	True	AGTAAA	-15	NA	88523528	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.64	chr3	+	3084	16	NNC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	79	0	intron_retention	FALSE	non_canonical	0	0	junction_8	108.317229572318	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9473	False	NA	15	True	ATTAAA	-17	NA	88523528	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540848_88549890_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.66	chr3	+	3042	12	ISM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	84	10113	84	-397	5prime_fragment	FALSE	canonical	3	97	junction_1	92.5331300956001	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCTGATTTAGATT	9478	False	NA	NA	False	NA	NA	NA	88523533	88544726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161
ES.21856.67	chr3	+	5054	23	NNC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	84	0	intron_retention	FALSE	canonical	1	2	junction_14	87.4089372664465	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9478	False	NA	15	True	ATTAAA	-17	NA	88523533	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88547446_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.68	chr3	+	4399	23	NNC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	84	1	intron_retention	FALSE	canonical	2	3	junction_4	86.831983672088	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	9478	False	NA	12	True	ATTAAA	-14	NA	88523533	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539588_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.69	chr3	+	4366	23	NIC	ENSMUSG00000028059.17	novel	4492	23	NA	NA	84	-1	intron_retention	FALSE	canonical	2	8	junction_6	86.7404340118378	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTGGAAATGAAGC	9478	False	NA	10	True	ATTAAA	-12	NA	88523533	88555354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540601_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.7	chr3	+	5152	26	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-297	621	intron_retention	FALSE	canonical	1	1	junction_1	113.763431734455	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTGTGTTTTTCTTT	408	False	NA	NA	False	NA	NA	NA	88514463	88555980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88514520_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.70	chr3	+	7204	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	98	-2810	98	2810	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAAGCAAGGTGCG	9492	False	NA	NA	False	AATAAA	-14	NA	88523547	88558169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.71	chr3	+	5635	21	ISM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	100	603	100	0	intron_retention	FALSE	canonical	3	97	junction_1	72.5068789839971	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	9494	False	NA	9	True	AGTAAA	-15	NA	88523549	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096
ES.21856.72	chr3	+	4394	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	-22	-72	-22	72	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCATCTGCCATGCTTG	NA	False	NA	87	True	NA	NA	NA	88528390	88555431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.74	chr3	+	3194	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	-12	1118	-12	5	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGATTGTCCTTACCA	NA	False	NA	14	True	AGTAAA	-20	NA	88528400	88554241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.75	chr3	+	4621	20	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	163	junction_1	46.1547439361506	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	NA	False	NA	11	True	ATTAAA	-13	NA	88528411	88555355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.77	chr3	+	5776	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	2	-1478	2	1478	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGTGAGTTGGGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	88528414	88556837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.78	chr3	+	4291	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	3	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528415	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.79	chr3	+	3169	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	4	2	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTGATTGTCCTTA	NA	False	NA	11	True	AGTAAA	-17	NA	88528416	88554238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.8	chr3	+	5140	26	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-48	621	intron_retention	FALSE	canonical	1	1	junction_1	113.763431734455	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTGTGTTTTTCTTT	862	False	NA	NA	False	NA	NA	NA	88514917	88555980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88514962_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.80	chr3	+	2932	11	ISM	ENSMUSG00000028059.17	ENSMUST00000177418.8	1883	13	-20	2113	-7	-393	5prime_fragment	FALSE	canonical	3	163	junction_1	58.2770109048156	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGATTTAGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	88528424	88544730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161
ES.21856.82	chr3	+	3730	21	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	163	junction_1	43.7681390968362	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	NA	False	NA	9	True	AGTAAA	-15	NA	88528432	88554236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.83	chr3	+	3869	23	NNC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	6	12	intron_retention	FALSE	canonical	1	1	junction_1	93.8947890191925	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTTTGAACTTGAGGAA	NA	False	NA	NA	False	TTTAAA	-27	NA	88528437	88554851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88528629_88528804_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.84	chr3	+	3749	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	31	520	-1	0	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAGCTCCATATCTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	88528443	88554839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.85	chr3	+	4703	19	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	16	1	intron_retention	FALSE	canonical	3	121	junction_4	65.2892188555311	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	NA	False	NA	12	True	ATTAAA	-14	NA	88528460	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.86	chr3	+	4871	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	48	-619	16	619	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCACTGTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	88528460	88555978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.9	chr3	+	4522	26	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	-43	1	intron_retention	FALSE	canonical	1	1	junction_1	113.763431734455	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCTGGAAATGAAGCGC	867	False	NA	12	True	ATTAAA	-14	NA	88514922	88555356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88514973_88515101_88515247_88521813_88521932_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.90	chr3	+	4531	21	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	31	-1	intron_retention	FALSE	canonical	3	163	junction_1	45.3496141108169	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGGCTGGAAATGAAGC	NA	False	NA	10	True	ATTAAA	-12	NA	88528475	88555354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.91	chr3	+	5709	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	33	1480	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTGAGTTGGGTGAT	NA	False	NA	NA	False	ATTAAA	-20	NA	88528477	88556839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.92	chr3	+	4475	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	-235	-2	63	0	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88528507	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.93	chr3	+	3341	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	-65	1114	-65	7	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGATTGTCCTTACCAGT	NA	False	NA	16	True	AGTAAA	-22	NA	88528533	88554243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.94	chr3	+	4404	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	-12	-2	-12	0	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528586	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.95	chr3	+	3160	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	-37	1115	-37	4	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGATTGTCCTTACC	NA	False	NA	13	True	AGTAAA	-19	NA	88528705	88554240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.96	chr3	+	4407	23	NNC	ENSMUSG00000028059.17	novel	4390	22	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	98.4828717750343	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528741	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88528907_88533573_88533732_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.97	chr3	+	4575	20	NIC	ENSMUSG00000028059.17	novel	4390	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	33	junction_1	71.82164736673	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528762	88555359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.98	chr3	+	3231	21	NIC	ENSMUSG00000028059.17	novel	4238	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	33	junction_1	81.4130671329855	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAACTGCTGATTGTC	NA	False	NA	7	True	AGTAAA	-13	NA	88528764	88554234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21856.99	chr3	+	5191	20	NIC	ENSMUSG00000028059.17	novel	4390	22	NA	NA	9	0	intron_retention	FALSE	canonical	3	33	junction_1	71.8782442360679	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88528775	88555357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540675_88540806_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ES.21857.1	chr3	-	177	1	Intergenic	novelGene_18064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGAAGAGG	8644	False	NA	NA	False	NA	NA	NA	88502472	88502295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88502300_88502500
ES.21858.1	chr3	-	215	1	Intergenic	novelGene_18065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTTAGGGTTTAACGG	1993	False	NA	NA	False	AAAACA	-17	NA	88510619	88510404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88510400_88510600
ES.21859.1	chr3	-	1136	1	Intergenic	novelGene_18066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCAGGTACACTGGGTC	NA	False	NA	NA	False	NA	NA	NA	88520376	88519240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88519200_88520400
ES.2186.1	chr1	+	3505	3	NNC	ENSMUSG00000057072.12	novel	443	3	NA	NA	-451	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATGTCTGCAAATTAT	7423	False	NA	NA	False	AATAAA	-16	NA	190768384	190775138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190768420_190768836_190768910_190771741
ES.21860.1	chr3	-	4945	23	NNC	ENSMUSG00000093390.2	novel	383	3	NA	NA	-27674	1015	intron_retention	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGACAAAGGCACCTAAG	NA	False	NA	NA	False	AGTAAA	-3	NA	88556042	88522748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88522827_88523865_88523960_88537091_88537239_88539217_88539285_88539580_88539646_88540217_88540350_88540563_88540671_88540802_88540953_88541715_88541968_88542288_88542414_88542905_88543022_88543158_88543409_88545575_88545652_88546627_88546800_88547589_88547658_88549732_88549932_88550230_88550346_88550453_88550522_88550649_88550686_88550866_88550917_88551093_88551539_88553481_88553662_88554089
ES.21860.2	chr3	-	2139	1	Antisense	novelGene_ENSMUSG00000028059.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAACAAAA	9603	False	NA	NA	False	NA	NA	NA	88543306	88541167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88541200_88543300
ES.21860.3	chr3	-	230	1	Antisense	novelGene_ENSMUSG00000028059.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCTAAATCAGCCAATT	9474	False	NA	NA	False	NA	NA	NA	88544978	88544748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88544700_88545000
ES.21860.4	chr3	-	211	1	Intergenic	novelGene_18067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8546	False	NA	NA	False	NA	NA	NA	88545906	88545695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88545700_88545900
ES.21861.1	chr3	-	171	1	Intergenic	novelGene_18068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88586695	88586524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88586500_88586700
ES.21862.1	chr3	-	180	2	Intergenic	novelGene_18070	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88590140	88589706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88589748_88590001
ES.21862.2	chr3	-	179	1	Intergenic	novelGene_18069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88589885	88589706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88589700_88589900
ES.21862.3	chr3	-	178	1	Intergenic	novelGene_18071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88590137	88589959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88590000_88590100
ES.21863.1	chr3	+	248	1	Intergenic	novelGene_18072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTTAGGAACTAAACTG	3508	False	NA	NA	False	NA	NA	NA	88590402	88590650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88590400_88590600
ES.21864.1	chr3	+	3014	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	-20	-13	-20	13	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTTTTTTTGCATG	6195	False	NA	29	True	AATAAA	-29	NA	88593089	88620244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ES.21864.10	chr3	+	2948	14	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	107.199642320343	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCATTTCTCTTT	10	True	NA	11	True	AATAAA	-12	NA	88593111	88620159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618895
ES.21864.11	chr3	+	2148	15	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	101.138140527636	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTTTAATGTGCATT	14	False	NA	13	True	AATAAA	-13	NA	88593115	88620228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619041_88619864
ES.21864.12	chr3	+	2895	14	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	106.430297772879	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGTCATTTCTCTT	14	False	NA	10	True	AATAAA	-11	NA	88593115	88620158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600429_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ES.21864.13	chr3	+	4896	11	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-3	6	intron_retention	FALSE	canonical	3	344	junction_7	26.8767557566013	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCATTGTTGTTTTT	16	False	NA	22	True	AATAAA	-22	NA	88593117	88620237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607822_88616086_88617250_88618067
ES.21864.14	chr3	+	2124	8	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	131.816353387613	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTGCATTGTTGTTT	-12	True	NA	20	True	AATAAA	-20	NA	88593118	88620235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596520_88607700_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ES.21864.15	chr3	+	5133	11	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-2	-2966	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	117.739585526704	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTCCACCTCATTTTT	-12	True	NA	NA	False	AATAAA	-19	NA	88593118	88613249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88609426
ES.21864.17	chr3	+	3089	13	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-1	-168	intron_retention	FALSE	canonical	3	42	junction_9	122.701082128706	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTTATTTTTGCA	-11	True	NA	NA	False	AATACA	-18	NA	88593119	88619701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.18	chr3	+	2844	14	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	124.465912255563	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGCATTGTTGTTTT	-11	True	NA	21	True	AATAAA	-21	NA	88593119	88620236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ES.21864.19	chr3	+	3301	13	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	0	7	intron_retention	FALSE	canonical	2	9	junction_8	128.991682548398	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-10	True	NA	23	True	AATAAA	-23	NA	88593120	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ES.21864.2	chr3	+	3749	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	-36	-77	-12	7	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-4	True	NA	23	True	AATAAA	-23	NA	88593097	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.20	chr3	+	3754	13	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	11	-7	0	7	intron_retention	FALSE	canonical	3	322	junction_11	32.668367302671	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-10	True	NA	23	True	AATAAA	-23	NA	88593120	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067
ES.21864.21	chr3	+	2358	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	-13	1291	0	-440	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTTATGGTATTTTT	-10	True	NA	NA	False	NA	NA	NA	88593120	88618870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.22	chr3	+	1974	15	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	129.307358093586	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-9	True	NA	13	True	AATAAA	-14	NA	88593121	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619041_88619864
ES.21864.23	chr3	+	2531	10	FSM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-18	-125	1	125	multi-exon	FALSE	canonical	3	344	junction_7	30.6195289897731	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGTGTGGTGGC	-9	True	NA	NA	False	NA	NA	NA	88593121	88609045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567
ES.21864.24	chr3	+	4539	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	2	7	intron_retention	FALSE	canonical	3	42	junction_9	104.331480633794	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-8	True	NA	23	True	AATAAA	-23	NA	88593122	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88617250_88618067
ES.21864.25	chr3	+	3823	8	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	-17	-125	2	125	intron_retention	FALSE	canonical	3	344	junction_7	31.8452892745472	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGTGTGGTGGC	-8	True	NA	NA	False	NA	NA	NA	88593122	88609045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155
ES.21864.26	chr3	+	3431	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	3	-3	intron_retention	FALSE	canonical	1	1	junction_6	136.724734018984	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGTCATTTCTCTT	-7	True	NA	10	True	AATAAA	-11	NA	88593123	88620158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.27	chr3	+	3684	13	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	42	junction_9	100.011110493896	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-7	True	NA	13	True	AATAAA	-14	NA	88593123	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88617250_88618067_88618160_88618936
ES.21864.28	chr3	+	2781	15	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	103.339543372756	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-4	True	NA	13	True	AATAAA	-14	NA	88593126	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619115_88619227
ES.21864.29	chr3	+	3923	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	322	junction_10	32.9050725823982	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-4	True	NA	13	True	AATAAA	-14	NA	88593126	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607822_88616086_88616249_88617136_88617250_88618067
ES.21864.3	chr3	+	3648	13	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-12	7	intron_retention	FALSE	canonical	3	42	junction_9	122.701082128706	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	-4	True	NA	23	True	AATAAA	-23	NA	88593097	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.30	chr3	+	3733	13	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	6	-2	intron_retention	FALSE	canonical	3	9	junction_12	108.720174709614	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCATTTCTCTTT	-4	True	NA	11	True	AATAAA	-12	NA	88593126	88620159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067_88619041_88619864
ES.21864.32	chr3	+	3190	13	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	-5	4	intron_retention	FALSE	canonical	3	104	junction_10	83.7043407874805	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTGCATTGTTGTTT	-2	True	NA	20	True	AATAAA	-20	NA	88593128	88620235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ES.21864.33	chr3	+	2714	14	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	9	junction_13	147.284051125627	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGTCATTTCTCTTTT	-1	True	NA	12	True	AATAAA	-13	NA	88593129	88620160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067_88619041_88619864
ES.21864.35	chr3	+	3633	13	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	1	7	intron_retention	FALSE	canonical	3	42	junction_9	100.494195520604	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	10	True	NA	23	True	AATAAA	-23	NA	88593140	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617136_88617250_88618067
ES.21864.37	chr3	+	3877	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	104	junction_10	87.1637577273779	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGTCATTTCTCTTTT	13	False	NA	12	True	AATAAA	-13	NA	88593143	88620160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.38	chr3	+	2023	15	NNC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	120.027144038848	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCATTTCTCTTT	13	False	NA	11	True	AATAAA	-12	NA	88593143	88620159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936_88619041_88619864
ES.21864.4	chr3	+	4720	13	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_2	147.801927329187	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATGTGCATTGTTGT	-4	True	NA	18	True	AATAAA	-18	NA	88593097	88620233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88594481_88594542_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067
ES.21864.41	chr3	+	2580	12	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	115.417889671395	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGTCATTTCTCTTTT	14	False	NA	12	True	AATAAA	-13	NA	88593144	88620160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616159_88618936
ES.21864.42	chr3	+	2841	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198078.2	1922	14	7	-926	7	5	multi-exon	FALSE	canonical	2	9	junction_9	104.955555541635	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGCATTGTTGTTTT	20	False	NA	21	True	AATAAA	-21	NA	88593150	88620236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ES.21864.43	chr3	+	2754	9	ISM	ENSMUSG00000028060.15	ENSMUST00000200364.5	2388	10	11	-125	7	125	intron_retention	FALSE	canonical	3	344	junction_7	29.8158410077596	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATCTGGGTGTGGTGGC	20	False	NA	NA	False	NA	NA	NA	88593150	88609045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257
ES.21864.44	chr3	+	11860	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	7	7	intron_retention	FALSE	canonical	3	42	junction_9	127.417190739193	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	20	False	NA	23	True	AATAAA	-23	NA	88593150	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88616249_88617164_88617250_88618067
ES.21864.45	chr3	+	5901	10	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	11	7	intron_retention	FALSE	canonical	3	344	junction_7	28.2921268985639	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	24	False	NA	23	True	AATAAA	-23	NA	88593154	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88607822_88616086_88617250_88618067
ES.21864.46	chr3	+	3598	13	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	45	115	11	-45	intron_retention	FALSE	canonical	3	322	junction_11	32.668367302671	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTAGACCATAATTTC	24	False	NA	-32	True	NA	NA	NA	88593154	88620116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067
ES.21864.47	chr3	+	5172	10	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	11	7	intron_retention	FALSE	canonical	0	0	junction_9	127.164615778812	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	24	False	NA	23	True	AATAAA	-23	NA	88593154	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88616086
ES.21864.48	chr3	+	3230	13	ISM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	85	-292	75	0	3prime_fragment	FALSE	canonical	3	104	junction_10	83.6513930281831	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	40	False	NA	13	True	AATAAA	-14	NA	88593218	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ES.21864.49	chr3	+	3731	13	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	266	0	intron_retention	FALSE	non_canonical	0	0	junction_12	111.364142443707	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	231	False	NA	13	True	AATAAA	-14	NA	88593409	88620161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88619115_88619227
ES.21864.5	chr3	+	2462	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	-11	530	-11	-168	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTTATTTTTGCA	-3	True	NA	NA	False	AATACA	-18	NA	88593098	88619701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ES.21864.51	chr3	+	1482	9	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	-2213	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	122.626210493516	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCATTTCTCTTT	9832	False	NA	11	True	AATAAA	-12	NA	88603932	88620159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619079_88619710
ES.21864.52	chr3	+	5063	5	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-2011	6	intron_retention	FALSE	canonical	3	104	junction_3	125.262474428697	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCATTGTTGTTTTT	NA	False	NA	22	True	AATAAA	-22	NA	88604134	88620237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88606217_88607257_88607822_88616086_88616249_88617164_88617250_88618067
ES.21864.53	chr3	+	5993	1	FSM	ENSMUSG00002075203.1	ENSMUST00020183753.1	135	1	-220	-5638	-220	5638	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGCATTGTTGTTTTT	2281	False	NA	22	True	AATAAA	-22	NA	88614244	88620237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88614200_88620200
ES.21864.54	chr3	+	3681	2	NIC	ENSMUSG00000028060.15	novel	571	3	NA	NA	-347	7	intron_retention	FALSE	canonical	3	397	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	282	False	NA	23	True	AATAAA	-23	NA	88615739	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88617250_88618067
ES.21864.7	chr3	+	4660	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	-7	7	intron_retention	FALSE	canonical	3	344	junction_7	27.8348138040141	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	1	True	NA	23	True	AATAAA	-23	NA	88593102	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067
ES.21864.8	chr3	+	2965	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	-29	-369	-5	7	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCATTGTTGTTTTTT	3	True	NA	23	True	AATAAA	-23	NA	88593104	88620238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ES.21865.1	chr3	+	175	1	Intergenic	novelGene_18080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTCTAACTAG	1481	False	NA	NA	False	NA	NA	NA	88623408	88623583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88623400_88623600
ES.21866.1	chr3	+	2507	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	17	-1320	17	-2	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCAGATTTTTTTTTTA	2234	False	NA	NA	False	AATACA	-15	NA	88624161	88638354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.2	chr3	+	5316	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	17	-4129	17	2807	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCCTGTTAATTTG	2234	False	NA	NA	False	NA	NA	NA	88624161	88641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.3	chr3	+	5339	6	NIC	ENSMUSG00000028057.15	novel	993	6	NA	NA	-4	2806	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	29.0475472286388	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGCCTGTTAATTT	2251	False	NA	NA	False	NA	NA	NA	88624178	88641162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88624277_88624632_88624778_88624879_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.4	chr3	+	5324	6	FSM	ENSMUSG00000028057.15	ENSMUST00000172333.8	993	6	-23	-4308	0	2807	multi-exon	FALSE	canonical	2	5	junction_2	24.0881713710277	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCCTGTTAATTTG	2255	False	NA	NA	False	NA	NA	NA	88624182	88641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88624265_88624632_88624778_88624879_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.5	chr3	+	1204	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	39	-39	1	39	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACATCTGCGTTGTGTA	2256	False	NA	113	True	NA	NA	NA	88624183	88637073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.6	chr3	+	911	4	NIC	ENSMUSG00000028057.15	novel	1204	6	NA	NA	2	49	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.9679979508749	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCATTGTTTTGGTTAT	2257	False	NA	-48	True	NA	NA	NA	88624184	88636912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88624265_88624632_88624778_88633586_88633779_88636418
ES.21866.7	chr3	+	1228	5	NIC	ENSMUSG00000028057.15	novel	1204	6	NA	NA	1	-63	intron_retention	FALSE	canonical	3	56	junction_3	7.24568837309472	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGTACCGTGTGC	2261	False	NA	11	True	NA	NA	NA	88624188	88636971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88624265_88624632_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.8	chr3	+	1094	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	47	63	4	-63	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGTGTACCGTGTGC	2264	False	NA	11	True	NA	NA	NA	88624191	88636971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ES.21866.9	chr3	+	7186	6	NNC	ENSMUSG00000028057.15	novel	1204	6	NA	NA	545	5077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.4511296409413	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAAATTTTAGTTTTG	2835	False	NA	NA	False	AATAAA	-18	NA	88624762	88643433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418_88643004_88643170
ES.21867.1	chr3	+	6719	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-13352	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.988617169833	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88669170	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88669409_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715871_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.100	chr3	+	8001	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	93.5361838536635	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742564	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777155_88787359_88787482_88794212_88794409_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.101	chr3	+	7548	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	90.6008156937367	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742564	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777155_88787361_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.103	chr3	+	7806	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	93.9443012522482	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88742564	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742859_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.104	chr3	+	5533	14	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	1830	intron_retention	FALSE	canonical	3	44	junction_12	50.6190085211933	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGGCAGCTCAGGTGGT	NA	False	NA	NA	False	NA	NA	NA	88742564	88796089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212
ES.21867.105	chr3	+	6484	25	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	4	1894	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	103.578874937573	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGTTAATTAATT	NA	False	NA	16	True	NA	NA	NA	88742564	88809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.106	chr3	+	8000	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	93.5361838536635	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCGTTTTCTTCAT	NA	False	NA	14	True	AGTAAA	-18	NA	88742566	88817409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.107	chr3	+	7662	33	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	94.0106169203777	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742566	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88743236_88743373_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.108	chr3	+	7980	32	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	91.66421779594	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742566	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.109	chr3	+	7414	33	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	95.3938740744787	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742566	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797143_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544_88817253_88817377
ES.21867.11	chr3	+	6336	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-11	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	120.725839798536	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682511	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691617_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696_88732928_88733165
ES.21867.110	chr3	+	6051	25	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	8	1894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	105.821119702071	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGTTAATTAATT	NA	False	NA	16	True	NA	NA	NA	88742568	88809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742604_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.111	chr3	+	6359	28	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	88.1497665584389	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742572	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803015_88810048_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.112	chr3	+	8126	33	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.8461851663252	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742574	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88743050_88743236_88743373_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777158_88787366_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.116	chr3	+	7519	33	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	95.7596631465332	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742595	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742859_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803484_88803741_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.117	chr3	+	8151	31	NNC	ENSMUSG00000054199.19	novel	4083	6	NA	NA	45	-1	intron_retention	FALSE	canonical	0	0	junction_15	96.2111162438566	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742605	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742859_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796981_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88815915_88815993_88816097_88816544
ES.21867.118	chr3	+	4335	16	NNC	ENSMUSG00000054199.19	novel	4083	6	NA	NA	46	-2271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.699879957683	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCCCTACGCTTGTG	NA	False	NA	NA	False	AAAACA	-10	NA	88742606	88815135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742852_88794357_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678
ES.21867.119	chr3	+	7502	31	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	1552	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	95.5789667703564	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88744295	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794413_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810075_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.12	chr3	+	6560	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-11	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.578944372492	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682511	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.122	chr3	+	186	1	Intergenic	novelGene_18086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACCAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	88756095	88756281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88756100_88756300
ES.21867.123	chr3	+	6775	29	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-4395	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	91.945580622009	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88761907	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.124	chr3	+	5185	16	NNC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	-599	816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	118.762208729133	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCTCTTATTTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	88765703	88808622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236
ES.21867.125	chr3	+	6201	23	NNC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	-109	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.6679300527092	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88766193	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.126	chr3	+	6033	22	NNC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	4418	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.680496414532	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCAAGTGTTCGTTTT	NA	False	NA	8	True	AGTAAA	-12	NA	88770720	88817403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.128	chr3	+	5702	20	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	40674	1	-13924	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	97.0146346443672	271	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	7961	False	NA	10	True	AGTAAA	-14	NA	88783211	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88783238_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.129	chr3	+	7032	19	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	43484	1	-11114	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	98.7809023377832	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88786021	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.13	chr3	+	6672	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-6	492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.205656595828	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATATCTGTTTCTGCTTCC	NA	False	NA	115	True	NA	NA	NA	88682516	88733386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.130	chr3	+	10687	15	NIC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	-10069	-1	intron_retention	FALSE	canonical	0	0	junction_2	105.08499960916	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88787066	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88810208_88810288_88810409_88812758_88815915_88815993_88816097_88816544
ES.21867.131	chr3	+	6103	20	NNC	ENSMUSG00000054199.19	novel	4083	6	NA	NA	-9508	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.146299810766	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88787627	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88787905_88790815_88790918_88794212_88794412_88794865_88794953_88796977_88797299_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.132	chr3	+	2469	1	Intergenic	novelGene_18090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGCAAGACTTTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88788525	88790994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88788500_88791000
ES.21867.134	chr3	+	6935	16	NIC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	-2908	-2	intron_retention	FALSE	canonical	0	0	junction_1	106.311157562234	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88794227	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88794412_88794865_88794953_88796977_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88815915_88815993_88816097_88816544
ES.21867.135	chr3	+	7069	16	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	52654	4	-1944	-4	3prime_fragment	FALSE	canonical	3	105	junction_9	90.540745891928	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCTCAAGTGTTCGTTT	NA	False	NA	7	True	AGTAAA	-11	NA	88795191	88817402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.136	chr3	+	4975	15	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	485	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	105.676634221611	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88798226	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815331_88815915_88815993_88816097_88816544
ES.21867.137	chr3	+	181	1	Intergenic	novelGene_18091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAGCAGTTTCTGCA	NA	False	NA	5	True	NA	NA	NA	88801217	88801398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88801200_88801400
ES.21867.138	chr3	+	4705	12	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	59587	2	4383	-2	3prime_fragment	FALSE	canonical	3	105	junction_5	75.4022820094419	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88802124	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.139	chr3	+	3352	11	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	62473	2	7269	-2	3prime_fragment	FALSE	canonical	3	105	junction_4	69.5730551291231	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88805010	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.140	chr3	+	1502	4	ISM	ENSMUSG00000054199.19	ENSMUST00000081695.15	7587	33	62825	7708	7621	1892	internal_fragment	FALSE	canonical	3	111	junction_3	93.8947401201059	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTTGTGTTAATTAA	NA	False	NA	14	True	NA	NA	NA	88805362	88809698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.141	chr3	+	5738	7	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	9040	0	intron_retention	FALSE	non_canonical	0	0	junction_1	53.8044298052369	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88806781	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88807584_88807703_88810208_88810288_88810409_88812758_88812870_88814678_88815915_88815993_88816097_88816544
ES.21867.142	chr3	+	5122	3	NIC	ENSMUSG00000054199.19	novel	7537	32	NA	NA	14015	-1	combination_of_known_junctions	FALSE	canonical	3	153	junction_1	2	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88811756	88817405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88815915_88815993_88816097_88816544
ES.21867.143	chr3	+	4041	2	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	15545	0	intron_retention	FALSE	canonical	3	153	junction_1	0	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88813286	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88815915_88815993
ES.21867.15	chr3	+	6461	17	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-2	389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	108.77901911674	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGGGTCTGGTTTTG	NA	False	NA	12	True	AATATA	-13	NA	88682520	88733283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.16	chr3	+	2340	2	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	1	46322	1	-46322	5prime_fragment	FALSE	canonical	3	143	junction_1	0	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATGTTGTTTTGTC	NA	False	NA	NA	False	AATAAA	-10	NA	88682523	88686572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88682582_88684290
ES.21867.18	chr3	+	8263	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	5	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.228387747854	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682527	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88730144_88730183_88731105_88731656_88731842_88732696
ES.21867.19	chr3	+	5696	16	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	9	-3712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.623449578411	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTTTTGAGTATC	NA	False	NA	NA	False	CATAAA	-4	NA	88682531	88729182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88696963_88697070_88706913_88707026_88715213_88715410_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354
ES.21867.2	chr3	+	7083	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-13331	751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.188134312009	231	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCTACTTTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	88669191	88733645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88669409_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.20	chr3	+	6350	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	10	758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.052890048412	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTTCTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	88682532	88733652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696_88732895_88733466
ES.21867.21	chr3	+	8865	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	11	2702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.205656595828	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTGTAGCCCTGG	NA	False	NA	NA	False	AATAAA	-19	NA	88682533	88735596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.22	chr3	+	8557	17	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	12	384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	109.810632454239	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	NA	False	NA	7	True	AATATA	-8	NA	88682534	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682589_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88731105_88731377_88731842_88732696
ES.21867.24	chr3	+	3124	7	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	12	-15591	intron_retention	FALSE	non_canonical	0	0	junction_5	75.1193494824514	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAATCTAGAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	88682534	88717303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213
ES.21867.25	chr3	+	7348	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	16	750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	111.831930247302	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88682538	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.26	chr3	+	6547	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	16	389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.205656595828	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGGGTCTGGTTTTG	NA	False	NA	12	True	AATATA	-13	NA	88682538	88733283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.27	chr3	+	6819	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	18	384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.532488398923	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	NA	False	NA	7	True	AATATA	-8	NA	88682540	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731377_88731842_88732696
ES.21867.28	chr3	+	6425	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	21	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.221465626547	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682543	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696_88733044_88733163
ES.21867.29	chr3	+	6759	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	22	744	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	111.16054455906	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATACCTACTTTT	NA	False	NA	NA	False	NA	NA	NA	88682544	88733638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696_88733044_88733163
ES.21867.3	chr3	+	6636	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-13260	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.988617169833	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88669262	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88669409_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.30	chr3	+	6393	17	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	22	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.807963348813	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682544	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.32	chr3	+	6982	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	24	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	111.831930247302	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682546	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.33	chr3	+	7821	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	26	743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	116.581145903816	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	NA	False	NA	NA	False	NA	NA	NA	88682548	88733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88729346_88731105_88731656_88731842_88732696_88732895_88733466
ES.21867.34	chr3	+	3293	4	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	27	743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.299555701778	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	NA	False	NA	NA	False	NA	NA	NA	88682549	88733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88728969_88731105_88731656_88731842_88732696
ES.21867.36	chr3	+	6041	15	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	27	-3712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.034858320104	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTTTTGAGTATC	NA	False	NA	NA	False	CATAAA	-4	NA	88682549	88729182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354
ES.21867.37	chr3	+	9904	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	29	3810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.221465626547	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGGTTACTTTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	88682551	88736704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696_88735238_88735288
ES.21867.38	chr3	+	6583	20	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	29	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	112.367274738391	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682551	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88703339_88703379_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.4	chr3	+	6897	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-3761	743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.100495095269	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	NA	False	NA	NA	False	NA	NA	NA	88678761	88733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88678802_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706914_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.40	chr3	+	6777	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	34	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.446937430927	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682556	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682844_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.41	chr3	+	7188	17	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	35	1199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.807963348813	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTCTGACTGGCCTTA	NA	False	NA	NA	False	NA	NA	NA	88682557	88734093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696713_88706910_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.42	chr3	+	6988	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	36	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	113.309021070943	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682558	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731655_88731842_88732696
ES.21867.44	chr3	+	7204	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	66	750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.685183820921	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88682588	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682844_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88725515_88725600_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.45	chr3	+	6760	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	69	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	116.66842971151	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682591	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682844_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696713_88706910_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.46	chr3	+	6557	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	92	387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.080345631996	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTTGGGTCTGGTTT	NA	False	NA	10	True	AATATA	-11	NA	88682614	88733281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682687_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.47	chr3	+	3107	7	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	239	-27387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	63.0645612756395	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTTTTAGCCTAA	NA	False	NA	NA	False	NA	NA	NA	88682761	88705507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88704110_88704882
ES.21867.48	chr3	+	6670	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	360	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.495174642902	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682882	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88683039_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.49	chr3	+	174	1	Intergenic	novelGene_18082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAAACAAAAAGATA	2523	False	NA	NA	False	NA	NA	NA	88688350	88688524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88688400_88688500
ES.21867.5	chr3	+	6866	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-3746	743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.897300914944	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	NA	False	NA	NA	False	NA	NA	NA	88678776	88733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88678802_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.50	chr3	+	4419	17	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	9161	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	120.845572296837	222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	5856	False	NA	15	True	AATATA	-16	NA	88691683	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88727482_88728969_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.52	chr3	+	2355	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	35597	392	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	121.447272509513	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	1201	False	NA	15	True	AATATA	-16	NA	88718119	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88724769_88732821
ES.21867.53	chr3	+	4164	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	38482	-3259	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	128.263166965423	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGTCCCGAGTGCCATGG	4086	False	NA	NA	False	AATAAA	-29	NA	88721004	88729635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88729346
ES.21867.54	chr3	+	182	1	Intergenic	novelGene_18083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAGCAGTTTCTGT	5487	False	NA	NA	False	NA	NA	NA	88722405	88722587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88722400_88722600
ES.21867.55	chr3	+	5012	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	40792	750	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_1	81.3324043662795	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	6396	False	NA	NA	False	NA	NA	NA	88723314	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.56	chr3	+	2743	4	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	40826	384	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_1	89.0293334930809	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	6430	False	NA	7	True	AATATA	-8	NA	88723348	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88730848_88731105_88731656_88731842_88732696
ES.21867.57	chr3	+	2971	5	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	40957	743	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	135.133961312469	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATACCTACTTT	6561	False	NA	NA	False	NA	NA	NA	88723479	88733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88723557_88727594_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.58	chr3	+	5010	5	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	40980	384	intron_retention	FALSE	canonical	3	125	junction_1	79.5502985538081	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	6584	False	NA	7	True	AATATA	-8	NA	88723502	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88730848_88731842_88732696
ES.21867.59	chr3	+	7733	4	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	40980	750	intron_retention	FALSE	canonical	3	10	junction_3	136.768254926191	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	6584	False	NA	NA	False	NA	NA	NA	88723502	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88729346
ES.21867.6	chr3	+	6611	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-38	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.998598010857	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682484	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682589_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.60	chr3	+	5545	6	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	41395	384	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	132.804216800522	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	6999	False	NA	7	True	AATATA	-8	NA	88723917	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88729346_88731105_88731656_88731842_88732696
ES.21867.61	chr3	+	6181	5	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	42300	750	intron_retention	FALSE	non_canonical	0	0	junction_4	136.856448514493	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	7904	False	NA	NA	False	NA	NA	NA	88724822	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88725069_88726976_88727094_88727354_88729107_88729346_88732932_88733163
ES.21867.62	chr3	+	3612	3	Fusion	ENSMUSG00000078684.9_ENSMUSG00000054199.19	novel	6190	19	NA	NA	-14992	1516	multi-exon	FALSE	canonical	3	115	junction_1	156.5	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTACTTGAGCACACTT	NA	False	NA	NA	False	NA	NA	NA	88727542	88804057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88729107_88801748_88801866_88802126
ES.21867.63	chr3	+	3784	12	Fusion	ENSMUSG00000078684.9_ENSMUSG00000054199.19	novel	6190	19	NA	NA	-14259	0	multi-exon	FALSE	canonical	3	105	junction_5	80.8591265541957	477	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88728275	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_88729107_88730848_88731105_88731656_88731842_88732696_88732895_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.64	chr3	+	3342	3	NIC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	46012	389	combination_of_known_junctions	FALSE	canonical	3	272	junction_2	41	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGGGTCTGGTTTTG	NA	False	NA	12	True	AATATA	-13	NA	88728534	88733283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88731105_88731656_88731842_88732696
ES.21867.66	chr3	+	4647	4	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	46379	3805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	131.393387284986	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTGATTGGTTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	88728901	88736699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88729107_88730848_88731105_88731658_88731842_88732696
ES.21867.67	chr3	+	4206	1	Genic_Genomic	ENSMUSG00000078684.9	novel	NA	NA	NA	NA	46555	389	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGGGTCTGGTTTTG	NA	False	NA	12	True	AATATA	-13	NA	88729077	88733283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_88729100_88733300
ES.21867.68	chr3	+	1610	3	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	48474	384	intron_retention	FALSE	non_canonical	0	0	junction_2	177	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATCTTGGGTCTGG	NA	False	NA	7	True	AATATA	-8	NA	88730996	88733278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88731105_88731656_88733044_88733163
ES.21867.69	chr3	+	4276	3	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	48974	3784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	136	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAGAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	88731496	88736678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88731842_88732696_88735238_88735288
ES.21867.7	chr3	+	9184	16	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-21	392	intron_retention	FALSE	non_canonical	0	0	junction_5	110.322073947148	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGGTCTGGTTTTGTTT	NA	False	NA	15	True	AATATA	-16	NA	88682501	88733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88731105_88731656
ES.21867.70	chr3	+	4983	1	Genic_Genomic	ENSMUSG00000078684.9	novel	NA	NA	NA	NA	49192	3803	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCCTGATTGGTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	88731714	88736697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_88731700_88736700
ES.21867.71	chr3	+	4375	2	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	49730	3784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAAGAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	88732252	88736678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88735238_88735288
ES.21867.72	chr3	+	5896	24	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-10	1894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	107.472034433406	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGTTAATTAATT	NA	False	NA	16	True	NA	NA	NA	88742524	88809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.73	chr3	+	7573	32	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	88.6012944942465	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCGTTTTCTTCATGTC	NA	False	NA	17	True	AGTAAA	-21	NA	88742526	88817412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.74	chr3	+	7588	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	90.6008156937367	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCGTTTTCTTCATG	NA	False	NA	15	True	AGTAAA	-19	NA	88742526	88817410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.76	chr3	+	4384	14	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.5585044662663	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742526	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744457_88802677_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.77	chr3	+	5518	23	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-3	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	107.775219479639	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCCTTCAGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	88742531	88807838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236
ES.21867.78	chr3	+	6074	25	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	1	1894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	102.243165691187	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGTTAATTAATT	NA	False	NA	16	True	NA	NA	NA	88742538	88809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.79	chr3	+	2266	14	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	5	-6490	combination_of_known_splicesites	FALSE	canonical	3	44	junction_13	37.117596586139	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCCCCTCCACTGAA	NA	False	NA	27	True	NA	NA	NA	88742542	88787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377
ES.21867.8	chr3	+	6937	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-13	750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.205656595828	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88682509	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696715_88706913_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.80	chr3	+	7701	33	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	97.7650194263649	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742542	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88743236_88743373_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764437_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.81	chr3	+	5902	24	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	5	1894	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	103.411213207337	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGTGTTAATTAATT	NA	False	NA	16	True	NA	NA	NA	88742542	88809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.83	chr3	+	6421	24	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-11	819	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	101.627753975338	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTCTTATTTGTTTTGA	NA	False	NA	NA	False	AATAAA	-24	NA	88742549	88808625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236
ES.21867.84	chr3	+	8532	31	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-11	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	91.5416662873616	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88742549	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.85	chr3	+	5662	24	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-11	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	107.837885048789	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCTTCAGTCTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88742549	88807842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742604_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236
ES.21867.87	chr3	+	7371	31	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	97.3723437806307	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCAAGTGTTCGTTTT	NA	False	NA	8	True	AGTAAA	-12	NA	88742551	88817403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742604_88744296_88744828_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.88	chr3	+	4679	21	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-6	1413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	94.705543660337	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTTTTGAGTATC	NA	False	NA	NA	False	CATAAA	-4	NA	88742554	88803954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126
ES.21867.89	chr3	+	4436	2	ISM	ENSMUSG00000054199.19	ENSMUST00020183812.1	621	3	22	5030	-4	3956	5prime_fragment	FALSE	canonical	3	143	junction_1	0	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTGTTTTGTCTGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	88742556	88748692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88742597_88744296
ES.21867.9	chr3	+	6918	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	-11	750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.578944372492	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACCTACTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	88682511	88733644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715413_88715862_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ES.21867.90	chr3	+	6095	24	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-2	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	107.784581773336	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCCTTCAGTCTCAA	NA	False	NA	NA	False	NA	NA	NA	88742558	88807838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88743050_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236
ES.21867.91	chr3	+	7089	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-1	-462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	90.6008156937367	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTCCTGCACGGCAGCT	NA	False	NA	NA	False	TTTAAA	-40	NA	88742559	88816944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.92	chr3	+	7539	32	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	91.7097171320532	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGTGTTCGTTTTC	NA	False	NA	9	True	AGTAAA	-13	NA	88742559	88817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_88742604_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.93	chr3	+	7555	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	93.5802837724171	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCAAGTGTTCGTTTT	NA	False	NA	8	True	AGTAAA	-12	NA	88742559	88817403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742604_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.94	chr3	+	6028	25	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	1	1891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	103.957489976539	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTTTGTGTTAATTA	NA	False	NA	13	True	NA	NA	NA	88742561	88809697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88753697_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884
ES.21867.96	chr3	+	7356	31	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	94.5925766408525	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742562	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88744296_88744828_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777160_88787369_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21867.99	chr3	+	7515	32	NNC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.4905838965457	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTGTTCGTTTTCTT	NA	False	NA	11	True	AGTAAA	-15	NA	88742563	88817406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88742597_88743236_88743373_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
ES.21868.1	chr3	-	147	1	Intergenic	novelGene_18073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATAATTT	7932	False	NA	NA	False	NA	NA	NA	88599402	88599255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88599300_88599400
ES.21869.1	chr3	-	208	1	Intergenic	novelGene_18074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGTGAACTCTATT	7672	False	NA	NA	False	NA	NA	NA	88599662	88599454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88599500_88599700
ES.21869.10	chr3	-	4601	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	-27	-7	-27	6	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACAGCCTGGGTTTCTTTT	NA	False	NA	0	True	AATAAA	-29	NA	88679933	88652000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
ES.21869.11	chr3	-	2471	3	ISM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	10812	1025	597	-1025	3prime_fragment	FALSE	canonical	1	2	junction_1	4.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-34	NA	88669094	88653032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88655318_88656085_88656210_88669032
ES.21869.12	chr3	-	2741	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	1	1825	1	946	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAAAGCCACGTG	NA	False	NA	NA	False	NA	NA	NA	88679905	88653832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
ES.21869.13	chr3	-	1531	1	Genic_Genomic	ENSMUSG00000098912.8	novel	NA	NA	NA	NA	48359	464	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88691316	88689785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88689800_88691300
ES.21869.2	chr3	-	177	2	Intergenic	novelGene_18075	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	115	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88698582	88599484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88599633_88698553
ES.21869.3	chr3	-	171	1	Intergenic	novelGene_18076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	4494	False	NA	NA	False	NA	NA	NA	88602840	88602669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88602700_88602800
ES.21869.4	chr3	-	6504	1	Antisense	novelGene_ENSMUSG00002075203.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGGATAGTCACAGCT	7228	False	NA	NA	False	NA	NA	NA	88615911	88609407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88609400_88615900
ES.21869.5	chr3	-	207	1	Intergenic	novelGene_18077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCAGTCGCTAGCA	NA	False	NA	NA	False	NA	NA	NA	88623191	88622984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88623000_88623200
ES.21869.6	chr3	-	179	2	Intergenic	novelGene_18078	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAAAACACTT	NA	False	NA	NA	False	NA	NA	NA	88698583	88623010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88623139_88698532
ES.21869.7	chr3	-	179	2	Intergenic	novelGene_18079	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAAAACACT	NA	False	NA	NA	False	NA	NA	NA	88698584	88623011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88623109_88698502
ES.21869.8	chr3	-	5086	3	NNC	ENSMUSG00000098912.8	novel	2135	3	NA	NA	48358	54901	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88691317	88635348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88635552_88686388_88689749_88689794
ES.21869.9	chr3	-	159	1	Intergenic	novelGene_18081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATAAATCTTTTT	7938	False	NA	NA	False	NA	NA	NA	88645244	88645085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88645100_88645200
ES.2187.1	chr1	-	2931	4	NNC	ENSMUSG00000026632.18	novel	1028	2	NA	NA	-2710	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	13.6707311029399	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTTAAAAAAGGAATGA	NA	False	NA	-1	True	TATAAA	-19	NA	190784740	190778035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_190778518_190781478_190783179_190783500_190783707_190784197
ES.2187.2	chr1	-	1031	8	ISM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	2741	5	-723	-2	3prime_fragment	FALSE	canonical	2	15	junction_3	8.315218406203	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTGTATTTTTAAAAA	NA	False	NA	-9	True	TATAAA	-11	NA	190792361	190778043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309
ES.21870.10	chr3	-	4456	8	Intergenic	novelGene_18089	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGTATATCCAGGAT	NA	False	NA	NA	False	NA	NA	NA	88802780	88784546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88787487_88794217_88794409_88794862_88794953_88796977_88797144_88798117_88798265_88799824_88799976_88801748_88801864_88802124
ES.21870.2	chr3	-	5382	9	NNC	ENSMUSG00000098912.8	novel	6054	2	NA	NA	11667	3106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACGAAAAGCAGTAAGACC	NA	False	NA	NA	False	NA	NA	NA	88728008	88704882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88707031_88715218_88715410_88715859_88715950_88717975_88718142_88719318_88719466_88722938_88723054_88723314_88725067_88726974_88727092_88727352
ES.21870.3	chr3	-	3672	9	Antisense	novelGene_ENSMUSG00000064738.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACGAAAAGCAGTAAGACC	NA	False	NA	NA	False	NA	NA	NA	88802787	88704882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_88705177_88785631_88787487_88794217_88794409_88794862_88794953_88796977_88797144_88798117_88798265_88799824_88799976_88801748_88801864_88802124
ES.21870.4	chr3	-	562	2	NNC	ENSMUSG00000098912.8	novel	6054	2	NA	NA	9002	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGAGTCCTGGAGA	NA	False	NA	NA	False	AATAAA	-14	NA	88730673	88728582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88728982_88730510
ES.21870.5	chr3	-	180	1	Intergenic	novelGene_18084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8666	False	NA	NA	False	NA	NA	NA	88747299	88747119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88747100_88747300
ES.21870.6	chr3	-	179	2	Intergenic	novelGene_18085	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	1253	False	NA	NA	False	NA	NA	NA	88760996	88747120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88747278_88760974
ES.21870.7	chr3	-	2546	1	Genic_Genomic	ENSMUSG00000106218.2	novel	NA	NA	NA	NA	52898	467	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	7839	False	NA	NA	False	AAAAAG	-4	NA	88754410	88751864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_88751900_88754400
ES.21870.8	chr3	-	167	1	Intergenic	novelGene_18087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88779032	88778865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88778900_88779000
ES.21870.9	chr3	-	148	1	Intergenic	novelGene_18088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88780835	88780687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88780700_88780800
ES.21871.1	chr3	-	3288	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-10	3848	intron_retention	FALSE	non_canonical	0	0	junction_1	261.274671718543	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAACGTCAGAGTGTA	NA	False	NA	NA	False	TATAAA	-18	NA	88821220	88808565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88810188_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821098
ES.21871.11	chr3	-	2195	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-4	-265	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	249.159577174868	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAGCACTCTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	88821193	88816198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88816760_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820231_88820873_88821010_88821099
ES.21871.12	chr3	-	1828	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	50	-3	-18	3	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCATTTGTACATTTAAAA	NA	False	NA	-4	True	NA	NA	NA	88821256	88816918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.13	chr3	-	2340	11	NIC	ENSMUSG00000068922.15	novel	2093	15	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	20	junction_9	216.197964837785	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACGCATTTGTACATTT	NA	False	NA	-8	True	AATAAA	-43	NA	88821221	88816922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820231_88820873_88821010_88821099
ES.21871.14	chr3	-	2145	13	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-9	5	intron_retention	FALSE	canonical	3	676	junction_12	38.7649612694534	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTAGGGACCTGTTAC	NA	False	NA	-31	True	AATAAA	-20	NA	88821198	88816945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.16	chr3	-	2251	12	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	676	junction_11	39.96217219586	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821230	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820235_88820873_88821010_88821099
ES.21871.18	chr3	-	1828	13	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_4	206.791007622027	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821237	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817726_88817932_88818118_88818189_88818299_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.19	chr3	-	2546	9	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	676	junction_8	44.9901030783438	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821237	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88818747_88818843_88818979_88819070_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.2	chr3	-	10095	7	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	2	2486	intron_retention	FALSE	canonical	0	0	junction_6	273.400195074303	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAAGTGTGTGTGTGTG	NA	False	NA	NA	False	TTTAAA	-14	NA	88821208	88809927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819421_88819543_88820235_88820764
ES.21871.22	chr3	-	1903	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-143	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	199.961475579613	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821449	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821185
ES.21871.23	chr3	-	1528	11	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	225.103620583944	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821216	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88820164_88820235_88820873_88821010_88821099
ES.21871.24	chr3	-	1785	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	197.863409942523	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821254	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818970_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.25	chr3	-	1855	13	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	204.894417254893	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821239	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818322_88818593_88818747_88818839_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.27	chr3	-	1751	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	269.289993486048	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821230	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820025_88820086_88820164_88820235_88820873_88821010_88821102
ES.21871.28	chr3	-	2127	13	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_5	206.103331689066	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821208	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818299_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.29	chr3	-	1655	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	197.259838251435	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821190	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818918_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.3	chr3	-	2796	16	NNC	ENSMUSG00000068922.15	novel	2093	15	NA	NA	-6	485	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	247.130698664132	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAACAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	88821195	88811928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88812828_88816502_88816760_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.30	chr3	-	2530	9	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	691	junction_5	35.9409237499539	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821229	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817436_88817726_88817932_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88820086_88820164_88820235_88820873
ES.21871.32	chr3	-	2476	11	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_6	225.257741265422	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGTGTAGGGACCT	NA	False	NA	-36	True	AATAAA	-15	NA	88821229	88816950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818747_88818843_88818933_88819070_88819189_88819332_88819421_88819543_88820235_88820873_88821010_88821099
ES.21871.34	chr3	-	1754	14	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	197.259838251435	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGTGTGTAGGGACC	NA	False	NA	-37	True	AATAAA	-14	NA	88821220	88816951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818738_88818839_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.35	chr3	-	1936	13	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	9	-1	intron_retention	FALSE	canonical	2	4	junction_4	204.759394710529	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGTGTGTAGGGACC	NA	False	NA	-37	True	AATAAA	-14	NA	88821201	88816951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817547_88817620_88817726_88817932_88818118_88818189_88818299_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.36	chr3	-	2742	10	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_3	302.772008099971	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGTGTGTAGGGACC	NA	False	NA	-37	True	AATAAA	-14	NA	88821217	88816951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817726_88817932_88818118_88818189_88818425_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820235_88820764_88821010_88821099
ES.21871.37	chr3	-	2570	11	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_9	219.136852217969	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCCAGTGTGTAGGGAC	NA	False	NA	-38	True	AATAAA	-13	NA	88821223	88816952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88820235_88820764_88821010_88821099
ES.21871.38	chr3	-	1663	13	NIC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	16	junction_1	201.674293932899	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAACCCAGTGTGTAGG	NA	False	NA	-41	True	AATAAA	-10	NA	88821238	88816955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88817218_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.4	chr3	-	174	1	Intergenic	novelGene_18092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAAGAGGTT	NA	False	NA	6	True	NA	NA	NA	88812304	88812130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88812100_88812300
ES.21871.5	chr3	-	2108	15	NIC	ENSMUSG00000068922.15	novel	2093	15	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	192.952159133516	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACAAGTTCTCAAGGCC	NA	False	NA	NA	False	AATAAA	-30	NA	88821238	88812402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88812828_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.6	chr3	-	2995	9	NNC	ENSMUSG00000068922.15	novel	2093	15	NA	NA	1	10	intron_retention	FALSE	canonical	0	0	junction_1	327.166982403482	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCACAAGTTCTCAAGGC	NA	False	NA	NA	False	AATAAA	-29	NA	88821237	88812403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88812828_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818299_88818593_88818747_88818843_88820235_88820873_88821010_88821099
ES.21871.7	chr3	-	4193	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-9	-1564	intron_retention	FALSE	canonical	0	0	junction_1	192.952159133516	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGACTGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	88821198	88813977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88816469_88816986_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.8	chr3	-	2473	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-9	7	intron_retention	FALSE	canonical	3	32	junction_1	218.411939944235	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATACCTACCTTGTCCA	NA	False	NA	0	True	ATTAAA	-18	NA	88821198	88815926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88816760_88817045_88817215_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21871.9	chr3	-	1802	15	NNC	ENSMUSG00000068922.15	novel	1875	14	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.952159133516	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATACCTACCTTGTCCA	NA	False	NA	0	True	ATTAAA	-18	NA	88821195	88815926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88816089_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ES.21872.1	chr3	+	5926	5	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	-568	-20436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.63680924774785	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAGACAGTACCAGAGG	NA	False	NA	NA	False	NA	NA	NA	88857360	88915139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88857419_88873118_88873636_88888539_88893098_88909079_88909182_88914448
ES.21872.10	chr3	+	251	1	Intergenic	novelGene_18097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGGTCTTAGGAGA	NA	False	NA	NA	False	AAAAAG	-15	NA	88940919	88941170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88940900_88941200
ES.21872.11	chr3	+	5320	20	ISM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	69090	1	11719	-1	3prime_fragment	FALSE	canonical	3	5	junction_3	4.14287761140093	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGGAGTCTTTGTGC	NA	False	NA	1	True	ATTAAA	-17	NA	88942208	88986679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ES.21872.13	chr3	+	3913	18	ISM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	77488	757	-9502	-757	3prime_fragment	FALSE	canonical	3	5	junction_1	3.92225484192227	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGGAGTATTTTCTTA	169	False	NA	NA	False	ATTAAA	-22	NA	88950606	88985923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ES.21872.16	chr3	+	3299	7	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	16184	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.31576510716547	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGAGTCTTTGTGCC	5573	False	NA	2	True	ATTAAA	-18	NA	88976292	88986680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88976385_88977534_88977678_88977782_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ES.21872.2	chr3	+	8962	27	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	-251	-3037	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.7853326199987	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCAACTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	88857677	88983643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88857696_88873118_88873636_88888539_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282
ES.21872.3	chr3	+	172	1	Intergenic	novelGene_18094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGCTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	88862487	88862659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88862500_88862700
ES.21872.4	chr3	+	10516	26	ISM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	15658	-2	15658	0	3prime_fragment	FALSE	canonical	1	5	junction_9	4.02909419100621	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGAGTCTTTGTGCCTC	NA	False	NA	4	True	ATTAAA	-20	NA	88888776	88986682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ES.21872.5	chr3	+	5937	11	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	15913	-12075	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.47660585711988	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTGCTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	88889031	88951012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88937546_88937660_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803
ES.21872.6	chr3	+	9027	27	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	17293	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.07634029289121	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGAGTCTTTGTGCC	NA	False	NA	2	True	ATTAAA	-18	NA	88890411	88986680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88893098_88907034_88907183_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ES.21872.7	chr3	+	2956	10	ISM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	18960	35489	18960	-11896	internal_fragment	FALSE	canonical	1	5	junction_9	2.71256791460749	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88892078	88951191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803
ES.21872.8	chr3	+	2382	11	NNC	ENSMUSG00000028053.14	novel	11268	27	NA	NA	19960	-10361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.82753184180093	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATGAGAGTTGACACCT	NA	False	NA	NA	False	AATAAA	-14	NA	88893078	88952726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88952059
ES.21872.9	chr3	+	3587	1	Genic_Genomic	ENSMUSG00000028053.14	novel	NA	NA	NA	NA	4946	3447	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGACAAACAAAAGAGTAAT	NA	False	NA	NA	False	NA	NA	NA	88935435	88939022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_88935400_88939000
ES.21873.1	chr3	-	4295	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	463	2	0	-2	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	88857258	88828111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.10	chr3	-	1544	11	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	90	-1	intron_retention	FALSE	canonical	2	6	junction_2	268.60731561147	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857488	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.11	chr3	-	1568	13	FSM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	33	-192	33	-1	multi-exon	FALSE	canonical	0	0	junction_12	248.441964495176	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88858455	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858267
ES.21873.12	chr3	-	2928	10	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	12006	1	576	-1	3prime_fragment	FALSE	canonical	3	33	junction_2	265.573500091062	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88845252	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455
ES.21873.13	chr3	-	1701	13	NIC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	11	junction_12	245.456151322843	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88858496	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858175
ES.21873.14	chr3	-	1591	13	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	248.441964495176	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88858459	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858248
ES.21873.15	chr3	-	1801	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-122	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857843	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
ES.21873.16	chr3	-	1602	14	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	239.912656690381	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88858396	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174_88857249_88858248
ES.21873.17	chr3	-	1541	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	84	-1	intron_retention	FALSE	canonical	3	42	junction_4	248.823878102664	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857494	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.18	chr3	-	1366	10	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	88	-1	intron_retention	FALSE	canonical	3	21	junction_3	366.579114126242	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857490	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88834317_88834378_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.19	chr3	-	1451	12	NNC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	336.103462032278	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88858409	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858248
ES.21873.2	chr3	-	2140	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	-108	2728	-108	104	multi-exon	FALSE	canonical	3	805	junction_4	46.7537134591705	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTAGTTCTGTCTCC	NA	False	NA	55	True	AAGAAA	-14	NA	88857829	88830837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.20	chr3	-	1358	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	10	junction_10	251.441957221224	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGTATTGGATTTGC	NA	False	NA	-9	True	ATTAAA	-15	NA	88857258	88830943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88850081_88850136_88857174
ES.21873.21	chr3	-	7329	12	ISM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	2403	-191	1128	-2	3prime_fragment	FALSE	canonical	3	805	junction_4	48.5854448836836	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGTATTGGATTTGC	NA	False	NA	-9	True	ATTAAA	-15	NA	88856085	88830943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081
ES.21873.23	chr3	-	4135	9	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	68	-2	intron_retention	FALSE	canonical	3	848	junction_3	33.3269785609197	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGTATTGGATTTGC	NA	False	NA	-9	True	ATTAAA	-15	NA	88857510	88830943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88833669_88834317_88835835_88836702_88836834_88837782_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.24	chr3	-	1577	14	NNC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	321.706948863007	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88858409	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858132_88858190_88858267
ES.21873.25	chr3	-	1577	13	NNC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	248.441964495176	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88858458	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850132_88858255
ES.21873.26	chr3	-	1491	13	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	245.406281613889	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88857262	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843586_88850081_88850136_88857174
ES.21873.27	chr3	-	2228	10	NIC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_6	371.422191642401	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88858459	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88840871_88840974_88843455_88843561_88850081_88850136_88858267
ES.21873.28	chr3	-	2332	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	805	junction_3	48.6716099983831	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88857268	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.29	chr3	-	1541	14	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	320.456497615363	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGTATTGGATTTG	NA	False	NA	-10	True	ATTAAA	-14	NA	88857260	88830944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88854867_88854945_88857174
ES.21873.3	chr3	-	1350	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	68	40	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	335.826327607068	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTCTGTCAGTTTCT	NA	False	NA	-9	True	NA	NA	NA	88857510	88830901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
ES.21873.30	chr3	-	1467	13	NNC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	248.531464585249	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGTGCTGTATTGGA	NA	False	NA	-14	True	ATTAAA	-10	NA	88857262	88830948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88831221_88832600_88832715_88833569_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.31	chr3	-	1826	11	ISM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	493	4681	-15	-1656	5prime_fragment	FALSE	canonical	3	805	junction_2	47.8360742536425	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTCAAAGCATCAGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	88857228	88832790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.32	chr3	-	708	5	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	-16	263	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	401.619222647522	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTGAGAAAACCTTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	88857274	88836486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88836834_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.33	chr3	-	1405	7	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	-562	5596	-99	212	5prime_fragment	FALSE	canonical	3	827	junction_2	41.8728233265125	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTTCTTACTGACT	NA	False	NA	NA	False	CATAAA	-15	NA	88857820	88836537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.34	chr3	-	931	8	NNC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	0	161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	407.882686215394	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTCCTATTTATGGCT	NA	False	NA	NA	False	AATAAA	-15	NA	88857258	88836588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88850580_88850720_88857174
ES.21873.35	chr3	-	194	1	Intergenic	novelGene_18093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGATATTGAAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	88854248	88854054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88854100_88854200
ES.21873.4	chr3	-	2026	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	-612	-39	-149	39	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTCTGTCAGTTTC	NA	False	NA	-10	True	NA	NA	NA	88857870	88830902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21873.6	chr3	-	3726	2	NIC	ENSMUSG00000068921.15	novel	718	7	NA	NA	-2468	-1	intron_retention	FALSE	canonical	3	906	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88835317	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88833669_88834317
ES.21873.7	chr3	-	1856	14	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-103	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	232.06477365511	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857824	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174_88857249_88857422
ES.21873.8	chr3	-	1396	12	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	2	37	junction_9	247.038960356225	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857292	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88843455_88843561_88850081_88850136_88857174
ES.21873.9	chr3	-	3062	10	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	805	junction_2	49.5859398630173	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	False	NA	-8	True	ATTAAA	-16	NA	88857268	88830942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88831221_88832600_88834378_88835515_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ES.21874.1	chr3	-	185	1	Intergenic	novelGene_18095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	88870678	88870493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88870500_88870700
ES.21875.1	chr3	-	4978	1	Intergenic	novelGene_18096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATTGTGTCACAAAT	9979	False	NA	NA	False	NA	NA	NA	88903826	88898848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88898800_88903800
ES.21876.1	chr3	-	154	1	Intergenic	novelGene_18098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATCTTTTTTAA	5616	False	NA	NA	False	NA	NA	NA	88945563	88945409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88945400_88945600
ES.21877.1	chr3	+	1975	1	Intergenic	novelGene_18099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCAGGGATAAAGATG	1791	False	NA	NA	False	NA	NA	NA	88986688	88988663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88986700_88988700
ES.21878.1	chr3	-	201	1	Intergenic	novelGene_18100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGAGTCTCTTCTGCTC	NA	False	NA	NA	False	AAAACA	-5	NA	88987814	88987613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_88987600_88987800
ES.21879.1	chr3	+	182	1	Intergenic	novelGene_18101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTTTTTCATGTGCT	8713	False	NA	NA	False	NA	NA	NA	88993610	88993792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_88993600_88993800
ES.2188.1	chr1	+	3193	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-50	-1918	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	98.5721675840712	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTTTACTGTATT	NA	False	NA	14	True	AATAAA	-18	NA	190795158	190816753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190801452_190801616_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ES.2188.10	chr1	+	3066	6	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-1	-1926	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.823526868044	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTAATTGCATTTTT	NA	False	NA	6	True	AATAAA	-10	NA	190795219	190816745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803185_190803346_190812685_190812754_190814367
ES.2188.11	chr1	+	4632	6	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	1	-1919	intron_retention	FALSE	non_canonical	0	0	junction_3	112.690017304107	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATTTTTACTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	190795221	190816752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803185_190803346_190812685_190815835_190815887
ES.2188.12	chr1	+	2900	6	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	1	-1916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	89.3742692277817	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	16	True	AATAAA	-20	NA	190795221	190816755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814436
ES.2188.13	chr1	+	3085	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	1	-1925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.1247788390997	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTAATTGCATTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	190795221	190816746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795648_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
ES.2188.15	chr1	+	3134	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	5	-1918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	102.887344000881	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTTTACTGTATT	NA	False	NA	14	True	AATAAA	-18	NA	190795232	190816753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190812924_190813103_190814367
ES.2188.16	chr1	+	1927	1	NIC	ENSMUSG00000062510.13	novel	608	5	NA	NA	1150	-9099	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGCTGTGTGGTGTGA	NA	False	NA	NA	False	NA	NA	NA	190796377	190798304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190796400_190798300
ES.2188.17	chr1	+	3433	5	NNC	ENSMUSG00000062510.13	novel	608	5	NA	NA	5596	-1917	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	85.2833512474739	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTTTTACTGTATTT	NA	False	NA	15	True	AATAAA	-19	NA	190800823	190816754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190801616_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ES.2188.2	chr1	+	3006	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-43	1916	-24	-1916	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	16	True	AATAAA	-20	NA	190795184	190816755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ES.2188.3	chr1	+	2935	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-2	-1912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.1517904045108	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTACTGTATTTTAAGG	NA	False	NA	20	True	AATAAA	-24	NA	190795206	190816759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
ES.2188.4	chr1	+	4535	6	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	6	-1918	intron_retention	FALSE	non_canonical	0	0	junction_5	89.3742692277817	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTTTACTGTATT	NA	False	NA	14	True	AATAAA	-18	NA	190795214	190816753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190815835_190815887
ES.2188.5	chr1	+	3081	8	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-5	-1919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.249169854693	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATTTTTACTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	190795215	190816752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190801452_190801616_190802186_190802318_190803374_190803430_190812685_190812754_190814367_190815830_190815883
ES.2188.6	chr1	+	2905	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-5	-1918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.168799978155	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTTTACTGTATT	NA	False	NA	14	True	AATAAA	-18	NA	190795215	190816753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190802201_190802318_190803374_190803430_190812685_190812754_190814367_190815835_190815887
ES.2188.7	chr1	+	2786	4	NIC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-5	-1919	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	105.237297993102	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCATTTTTACTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	190795215	190816752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190795470_190797371_190797451_190812685_190812754_190814367
ES.2188.8	chr1	+	4589	5	ISM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-12	1916	-5	-1916	intron_retention	FALSE	canonical	3	208	junction_2	16.8133131773604	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTTACTGTATTTT	NA	False	NA	16	True	AATAAA	-20	NA	190795215	190816755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685
ES.2188.9	chr1	+	4743	6	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	-5	-1925	intron_retention	FALSE	canonical	3	12	junction_2	104.912534999398	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTAATTGCATTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	190795215	190816746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_190795470_190797371_190797451_190801452_190801616_190802186_190802318_190803374_190803430_190812685
ES.21880.1	chr3	-	3441	11	NNC	ENSMUSG00000041263.15	novel	3316	10	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	16.1372240487638	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTCCCTGTGGGTT	NA	False	NA	-1	True	AATAAA	-17	NA	89000616	88991283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997420_88997544_88998444_88999869_89000573
ES.21880.2	chr3	-	3312	10	FSM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	8	-4	8	4	multi-exon	TRUE	canonical	0	0	junction_9	13.9292746170798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTCCCTGTGGGTT	NA	False	NA	-1	True	AATAAA	-17	NA	89000610	88991283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
ES.21880.3	chr3	-	2347	8	NIC	ENSMUSG00000041263.15	novel	3706	11	NA	NA	-817	0	intron_retention	FALSE	canonical	2	6	junction_7	10.656032113698	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88998169	88991287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996869_88996975_88997075_88997802
ES.21880.4	chr3	-	1911	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	11	0	11	0	multi-exon	FALSE	canonical	2	2	junction_8	11.2354072022335	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88997341	88991287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
ES.21880.5	chr3	-	2198	9	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	2444	0	-801	0	3prime_fragment	FALSE	canonical	2	6	junction_8	9.96791728496981	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88998153	88991287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802
ES.21880.6	chr3	-	2514	10	NNC	ENSMUSG00000041263.15	novel	3706	11	NA	NA	-994	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.7120509938093	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88998346	88991287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997420_88997544_88997802
ES.21880.7	chr3	-	1920	9	NIC	ENSMUSG00000041263.15	novel	1922	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_8	10.5999705188269	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88997300	88991287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997227
ES.21881.1	chr3	-	1247	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	-9	-1	-9	1	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGTTTTATTCTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	89009275	89000893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ES.21881.13	chr3	-	2563	7	NIC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	32	-4	intron_retention	FALSE	canonical	3	2209	junction_1	99.1424340140095	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	False	NA	-7	True	AATAAA	-10	NA	89009234	89000898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002784_89002905_89002987_89006606_89006748_89007975
ES.21881.16	chr3	-	1181	10	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	32	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	739.393445106641	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGTTCAACATCCTG	NA	False	NA	-18	True	NA	NA	NA	89009234	89000909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89001151_89001537_89001673_89001758_89001828_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ES.21881.17	chr3	-	3026	1	FSM	ENSMUSG00000059743.13	ENSMUST00000198239.2	2953	1	-46	-27	22	27	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGTAGTTTTACCA	NA	False	NA	NA	False	NA	NA	NA	89009244	89006218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89006200_89009200
ES.21881.18	chr3	-	1993	2	NIC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	25	27	intron_retention	FALSE	canonical	3	1662	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGTAGTTTTACCA	NA	False	NA	NA	False	NA	NA	NA	89009241	89006218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89008139_89009168
ES.21881.19	chr3	-	684	3	ISM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	79	5351	8	0	5prime_fragment	FALSE	canonical	3	1662	junction_2	288	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89009187	89006245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89006748_89007975_89008139_89009168
ES.21881.2	chr3	-	1158	10	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_7	741.674099005623	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGGTTTTATTCTTG	NA	False	NA	-4	True	AATAAA	-13	NA	89009194	89000895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002981_89006606_89006748_89007975_89008139_89009168
ES.21881.20	chr3	-	1672	2	ISM	ENSMUSG00000059743.13	ENSMUST00000199668.3	482	4	12	3342	12	-2	intron_retention	FALSE	canonical	3	2238	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89009147	89006247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89006748_89007975
ES.21881.3	chr3	-	5509	5	NIC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	23	-1	intron_retention	FALSE	canonical	3	1662	junction_4	297.646077582084	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGGTTTTATTCTTG	NA	False	NA	-4	True	AATAAA	-13	NA	89009243	89000895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89001837_89002166_89002410_89002660_89006748_89007975_89008139_89009168
ES.21881.4	chr3	-	1415	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	-36	3	-33	-3	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTGGTTTTATTCT	NA	False	NA	-6	True	AATAAA	-11	NA	89009231	89000897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
ES.21881.5	chr3	-	2197	9	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	-4	3	-1	-3	intron_retention	FALSE	canonical	3	2209	junction_1	106.556323134763	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTGGTTTTATTCT	NA	False	NA	-6	True	AATAAA	-11	NA	89009199	89000897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ES.21881.7	chr3	-	6195	5	NIC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	481	-3	intron_retention	FALSE	canonical	3	2209	junction_1	126.584704842252	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTGGTTTTATTCT	NA	False	NA	-6	True	AATAAA	-11	NA	89008141	89000897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89001151_89001537_89001837_89002166_89002240_89002320_89002410_89002660
ES.21881.8	chr3	-	5702	9	NIC	ENSMUSG00000059743.13	novel	1382	11	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	144	junction_8	734.072022607455	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTGGTTTTATTCT	NA	False	NA	-6	True	AATAAA	-11	NA	89009173	89000897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89006748_89007975_89008139_89008227
ES.21881.9	chr3	-	1140	10	NNC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	746.148696000475	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	False	NA	-7	True	AATAAA	-10	NA	89009198	89000898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002962_89006606_89006748_89007975_89008139_89009168
ES.21882.1	chr3	+	177	1	Intergenic	novelGene_18102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	89025987	89026164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89026000_89026200
ES.21883.1	chr3	-	192	1	Intergenic	novelGene_18103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAGAGTATAATTA	NA	False	NA	NA	False	NA	NA	NA	89029438	89029246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89029200_89029400
ES.21884.1	chr3	-	239	1	Intergenic	novelGene_18104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATATTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	89034611	89034372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89034400_89034600
ES.21885.1	chr3	+	221	1	Intergenic	novelGene_18106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACAACGCAGAATAGG	NA	False	NA	NA	False	AATAAA	-10	NA	89066096	89066317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89066100_89066300
ES.21886.1	chr3	-	4475	2	ISM	ENSMUSG00000028051.11	ENSMUST00000029686.4	4002	8	8532	699	-432	-699	intron_retention	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGTTCACTTATTCAC	NA	False	NA	NA	False	NA	NA	NA	89058971	89054079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89055607_89056023
ES.21886.2	chr3	-	3286	8	FSM	ENSMUSG00000028051.11	ENSMUST00000029686.4	4002	8	13	703	13	-703	multi-exon	FALSE	canonical	0	0	junction_5	6.95759752107767	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACTTGTTCACTTAT	NA	False	NA	NA	False	NA	NA	NA	89067490	89054083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89055607_89056023_89056189_89057122_89057364_89057661_89057809_89058168_89058388_89058731_89058894_89059937_89060368_89067091
ES.21886.3	chr3	-	3583	7	NIC	ENSMUSG00000028051.11	novel	4002	8	NA	NA	59	-704	intron_retention	FALSE	canonical	0	0	junction_6	6.82316316348624	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGACTTGTTCACTTA	NA	False	NA	NA	False	NA	NA	NA	89067444	89054084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89055607_89056023_89056189_89057122_89057364_89057661_89057809_89058168_89058894_89059937_89060368_89067091
ES.21886.4	chr3	-	1467	3	NNC	ENSMUSG00000028051.11	novel	4002	8	NA	NA	11	-396	intron_retention	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGCTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	89067492	89059183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89059314_89059352_89060289_89067091
ES.21886.5	chr3	-	1544	3	NNC	ENSMUSG00000028051.11	novel	4002	8	NA	NA	13	-396	intron_retention	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGCTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	89067490	89059183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89059314_89059352_89060368_89067091
ES.21886.6	chr3	-	174	1	Intergenic	novelGene_18105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	89063128	89062954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89063000_89063100
ES.21887.1	chr3	+	4210	21	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	-9	7	multi-exon	TRUE	canonical	3	173	junction_3	311.284676783166	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGTATCTTTACTGG	NA	False	NA	25	True	ATTAAA	-29	NA	89072092	89090079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.10	chr3	+	2059	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	-175	1	9	1	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072110	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.100	chr3	+	3981	6	NIC	ENSMUSG00000028049.16	novel	1338	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1039	junction_1	65.4999236640777	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084775	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89086531_89086623_89087688_89088035_89088196_89088481_89089351_89089605
ES.21887.101	chr3	+	1539	9	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	368.976773489877	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89084779	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086347_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.102	chr3	+	1829	8	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	379	junction_2	249.598780085978	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084788	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.103	chr3	+	4936	3	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1099	junction_2	37	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084788	89090072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89086531_89086623_89089351_89089605
ES.21887.104	chr3	+	1493	9	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_8	360.058328608019	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89084792	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089372_89089605
ES.21887.105	chr3	+	1353	8	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	-4	-22	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	433.876451896394	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGTGTAACT	NA	False	NA	-6	True	TTTAAA	-3	NA	89084792	89090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89089232_89089351_89089605
ES.21887.106	chr3	+	3659	6	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	940	junction_4	78.6933288150908	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCACCCATTTCCTG	NA	False	NA	13	True	ATTAAA	-17	NA	89084793	89090067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89086531_89086623_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.107	chr3	+	961	6	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-2	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	423.249051977674	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGTGTAACT	NA	False	NA	-6	True	TTTAAA	-3	NA	89084794	89090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085368_89088138_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.108	chr3	+	1312	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	5	158	-1	-156	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCGCTGTGACTCAGT	NA	False	NA	NA	False	GGGGCT	-44	NA	89084801	89089914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.109	chr3	+	2374	7	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_2	276.581312134826	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084802	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086398_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.111	chr3	+	4296	5	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	5	-1	intron_retention	FALSE	canonical	3	1039	junction_1	47.5683718451662	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89084807	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89086531_89086623_89088196_89088481_89089351_89089605
ES.21887.112	chr3	+	2364	7	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	11	4	5	-2	intron_retention	FALSE	canonical	3	379	junction_2	283.695699650171	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89084807	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481
ES.21887.113	chr3	+	2435	7	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	8	-2	intron_retention	FALSE	canonical	3	743	junction_1	156.597591155022	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89084810	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89089351_89089605
ES.21887.114	chr3	+	3297	7	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	940	junction_5	92.7912831155073	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084810	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.116	chr3	+	4650	3	NIC	ENSMUSG00000028049.16	novel	1338	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	1099	junction_2	65.5	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084817	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89087688_89088035_89089351_89089605
ES.21887.117	chr3	+	2912	7	NIC	ENSMUSG00000028049.16	novel	1338	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	743	junction_2	156.267310152259	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084817	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89089351_89089605
ES.21887.118	chr3	+	2608	7	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	743	junction_2	142.23425513333	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084820	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.119	chr3	+	1448	9	NNC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	368.654648688986	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89084831	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086386_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.12	chr3	+	2108	12	NNC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	191.514063096255	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072110	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082830_89082951_89083043_89083700
ES.21887.120	chr3	+	1391	10	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	354.654448411095	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACCCATTTCCTGTATC	NA	False	NA	17	True	ATTAAA	-21	NA	89084831	89090071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605_89089959_89090003
ES.21887.121	chr3	+	1635	10	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	457.755635926225	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCATTTCCTGTATCTT	NA	False	NA	19	True	ATTAAA	-23	NA	89084831	89090073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89088872_89089070_89089232_89089351_89089605
ES.21887.122	chr3	+	3532	5	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	5	-3	intron_retention	FALSE	canonical	3	379	junction_2	317.359023820026	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCACCCATTTCCTG	NA	False	NA	13	True	ATTAAA	-17	NA	89084831	89090067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89089351_89089605
ES.21887.123	chr3	+	1430	9	NNC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	358.562211303701	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89084832	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088039_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.124	chr3	+	1390	9	NNC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_6	397.248800344318	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTCCTGTATCTTTA	NA	False	NA	21	True	ATTAAA	-25	NA	89084832	89090075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088533_89088584_89089232_89089351_89089605
ES.21887.125	chr3	+	1740	8	NIC	ENSMUSG00000028049.16	novel	1489	9	NA	NA	14	-1	intron_retention	FALSE	canonical	3	743	junction_1	151.351867365758	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89084857	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.126	chr3	+	3182	4	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	612	-22	intron_retention	FALSE	canonical	3	940	junction_2	77.9358710735949	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGTGTAACT	NA	False	NA	-6	True	TTTAAA	-3	NA	89085676	89090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.127	chr3	+	4668	17	Fusion	ENSMUSG00000028049.16_ENSMUSG00000032657.16	novel	2802	12	NA	NA	2174	0	multi-exon	FALSE	canonical	0	0	junction_5	467.694745533879	502	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	NA	False	NA	7	True	AATAAA	-18	NA	89087238	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605_89090087_89090329_89091256_89091361_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ES.21887.128	chr3	+	3132	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	-51	2	9	0	multi-exon	FALSE	canonical	3	16	junction_5	4.5924839782964	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1672	False	NA	7	True	AATAAA	-18	NA	89090458	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ES.21887.13	chr3	+	3648	18	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	9	-3	intron_retention	FALSE	canonical	3	36	junction_11	356.071063238962	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCACCCATTTCCTG	NA	False	NA	13	True	ATTAAA	-17	NA	89072110	89090067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.131	chr3	+	3073	12	NNC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	8.06584473193412	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTTGGAGTATTCTG	1696	False	NA	5	True	AATAAA	-16	NA	89090482	89096594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095562_89095784_89095872
ES.21887.132	chr3	+	4319	9	NIC	ENSMUSG00000032657.16	novel	2977	11	NA	NA	-15	0	intron_retention	FALSE	canonical	2	5	junction_4	7.8491639682198	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1708	False	NA	7	True	AATAAA	-18	NA	89090494	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092743_89092917_89093040_89094156_89094365_89094912_89095382_89095784_89095872
ES.21887.133	chr3	+	3825	9	NIC	ENSMUSG00000032657.16	novel	2593	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	18	junction_1	4.1514304763539	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTGGAGTATTCTGT	1708	False	NA	6	True	AATAAA	-17	NA	89090494	89096595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89091256_89091458_89091831_89091936_89092057_89092195_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529
ES.21887.134	chr3	+	4110	10	NIC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	16	junction_5	4.96655480858378	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1717	False	NA	7	True	AATAAA	-18	NA	89090503	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89094156_89094365_89094912_89095382_89095784_89095872
ES.21887.135	chr3	+	3542	9	NIC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	-119	0	intron_retention	FALSE	canonical	3	18	junction_1	3.96665791315561	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1981	False	NA	7	True	AATAAA	-18	NA	89090767	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89091256_89091458_89091831_89091936_89092057_89092195_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095784_89095872
ES.21887.136	chr3	+	2020	8	NNC	ENSMUSG00000032657.16	novel	2593	11	NA	NA	654	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	9.49973146774074	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	3403	False	NA	7	True	AATAAA	-18	NA	89092189	89096596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095562_89095784_89095872
ES.21887.14	chr3	+	3317	7	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	9	-9	intron_retention	FALSE	canonical	3	370	junction_2	72.4054939597511	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTACACTTTACACT	NA	False	NA	-4	True	AATAAA	-10	NA	89072110	89083269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077717_89080683_89080851_89081503_89081599_89082251_89082548_89082698
ES.21887.16	chr3	+	2279	14	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	187.041905882647	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072111	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89073988_89074122_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.18	chr3	+	1854	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-34	950	11	0	5prime_fragment	FALSE	canonical	3	250	junction_3	91.6433979984058	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTACACTTTAATGTGG	NA	False	NA	5	True	AATAAA	-19	NA	89072112	89083278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.19	chr3	+	2828	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	-7	0	multi-exon	FALSE	canonical	3	36	junction_11	353.56268325101	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89072116	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.2	chr3	+	2406	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-51	-243	-6	243	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGAAGTTATGCCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	89072095	89084471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.20	chr3	+	3037	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	15	-240	-7	240	intron_retention	FALSE	canonical	3	173	junction_3	109.540211115552	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCCTTGAAGTTATGCC	NA	False	NA	NA	False	AATAAA	-12	NA	89072116	89084468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.21	chr3	+	1757	11	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	180.961459985269	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072116	89083276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076004_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.22	chr3	+	4160	8	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-9	-1	-7	1	intron_retention	FALSE	canonical	3	370	junction_2	56.1546697860072	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072116	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464
ES.21887.24	chr3	+	3950	18	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2128	13	NA	NA	-2	3	intron_retention	FALSE	canonical	3	36	junction_10	348.867788085994	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTCCTGTATCTTTA	NA	False	NA	21	True	ATTAAA	-25	NA	89072121	89090075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076004_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.25	chr3	+	5869	17	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	-2	-22	intron_retention	FALSE	canonical	3	39	junction_3	327.887723733293	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGTGTAACT	NA	False	NA	-6	True	TTTAAA	-3	NA	89072121	89090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.27	chr3	+	2482	12	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	-2	1	intron_retention	FALSE	canonical	3	250	junction_3	93.3379180298595	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072121	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.28	chr3	+	3259	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	36	junction_11	341.852451746996	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072121	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.3	chr3	+	2209	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-47	-50	-2	50	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAATTGGTAGCCATC	NA	False	NA	68	True	NA	NA	NA	89072099	89084278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.30	chr3	+	3573	10	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-1	8	intron_retention	FALSE	canonical	3	115	junction_2	129.279293788561	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTGGAATTTGAGGTT	NA	False	NA	26	True	AATAAA	-27	NA	89072122	89084236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076004_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082548_89082698_89082779_89082951
ES.21887.31	chr3	+	1783	10	NIC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	207.182033636434	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072122	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.34	chr3	+	2793	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-24	1	-1	1	intron_retention	FALSE	canonical	3	250	junction_3	91.6433979984058	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072122	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.35	chr3	+	6315	17	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_12	365.639716584167	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072122	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89086531_89086623_89086745_89087345_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.36	chr3	+	2318	12	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	4	junction_2	217.163266455266	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072122	89083276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89073988_89074122_89074341_89074512_89076004_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.38	chr3	+	900	6	ISM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	21	6571	-1	-59	5prime_fragment	FALSE	canonical	3	173	junction_3	118.969912162698	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGACTAGAAATCAACGT	NA	False	NA	NA	False	NA	NA	NA	89072122	89077657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599
ES.21887.39	chr3	+	3098	11	NNC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	-1	171	intron_retention	FALSE	canonical	1	1	junction_7	240.781311567156	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTGTGATCTAGAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	89072122	89084399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89073988_89074122_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89081503_89081599_89082254_89082382_89082464_89082548_89082698
ES.21887.4	chr3	+	3635	8	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	370	junction_2	66.0645942411281	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072102	89083276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89082548_89082698_89082779_89082951
ES.21887.42	chr3	+	7696	16	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	370	junction_2	300.127350747423	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89072122	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.44	chr3	+	2880	10	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-3	949	-1	-1	5prime_fragment	FALSE	canonical	3	370	junction_2	63.4017174670985	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTACACTTTAATGTG	NA	False	NA	4	True	AATAAA	-18	NA	89072122	89083277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.45	chr3	+	5322	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	250	junction_3	305.355575972959	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072122	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89085375_89086398_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.46	chr3	+	3977	9	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	370	junction_2	53.1101449819147	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072124	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082779_89082951
ES.21887.47	chr3	+	3414	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	0	-246	0	244	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGAAGTTATGCCCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89072125	89084472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.48	chr3	+	3159	11	NNC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_7	157.098567784687	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072125	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082372_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.49	chr3	+	3819	10	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	115	junction_2	134.20051332904	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072125	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076004_89077423_89077599_89077717_89080683_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.5	chr3	+	4520	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	3	-7	intron_retention	FALSE	canonical	3	250	junction_3	309.592234722633	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGAACTCACCCATTT	NA	False	NA	9	True	ATTAAA	-13	NA	89072104	89090063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.50	chr3	+	3720	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	36	junction_12	327.643946312999	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072125	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.51	chr3	+	5645	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_3	319.050191492433	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072125	89090072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89084965_89085296_89085375_89086398_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.52	chr3	+	2865	10	NNC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_7	165.367006726191	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072126	89083276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082372_89082464_89082548_89082698_89082779_89082951
ES.21887.53	chr3	+	3488	1	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	3	1105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGGAAATGTCTTTGG	NA	False	NA	NA	False	AAGAAA	-2	NA	89072128	89075616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072100_89075600
ES.21887.54	chr3	+	2943	21	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	5	-1	multi-exon	FALSE	canonical	0	0	junction_13	342.612404912607	919	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072130	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89083795_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088533_89088584_89089232_89089351_89089605
ES.21887.55	chr3	+	5092	10	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	5	1	intron_retention	FALSE	canonical	3	370	junction_1	69.4823896331711	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072130	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.56	chr3	+	1872	11	NIC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	200.616150895186	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072130	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.57	chr3	+	5383	15	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	6	-3	intron_retention	FALSE	canonical	3	36	junction_10	287.722797434033	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCACCCATTTCCTG	NA	False	NA	13	True	ATTAAA	-17	NA	89072131	89090067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89088584_89089232_89089351_89089605
ES.21887.58	chr3	+	4829	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	6	1	intron_retention	FALSE	canonical	3	250	junction_3	314.496977776371	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCATTTCCTGTATCTT	NA	False	NA	19	True	ATTAAA	-23	NA	89072131	89090073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.59	chr3	+	2804	12	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	6	-9	intron_retention	FALSE	canonical	3	115	junction_2	121.845926284247	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATCTGACCCCCCCCA	NA	False	NA	7	True	AATAAA	-8	NA	89072131	89084217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076004_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.6	chr3	+	2933	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	6	3	multi-exon	FALSE	canonical	3	36	junction_12	335.692091142168	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTCCTGTATCTTTA	NA	False	NA	21	True	ATTAAA	-25	NA	89072107	89090075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.61	chr3	+	3178	2	NNC	ENSMUSG00000068917.13	novel	593	3	NA	NA	7	1088	intron_retention	FALSE	canonical	0	0	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAAGAAAATCA	NA	False	NA	NA	False	NA	NA	NA	89072132	89075599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89075234_89075522
ES.21887.62	chr3	+	2640	12	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	8	169	intron_retention	FALSE	canonical	3	250	junction_3	93.3379180298595	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTTGTGTGATCTAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	89072133	89084397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.63	chr3	+	1526	2	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	8	8639	8	1076	5prime_fragment	FALSE	canonical	3	486	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89072133	89075587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89072414_89074341
ES.21887.64	chr3	+	2677	12	NNC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	9	1	intron_retention	FALSE	canonical	0	0	junction_2	172.384012988108	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072134	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074498_89076088_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.65	chr3	+	2116	13	NNC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	152.395569890408	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072134	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082375_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.68	chr3	+	3132	11	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	9	7	intron_retention	FALSE	canonical	3	173	junction_3	114.815678371902	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCCTGGAATTTGAGGT	NA	False	NA	25	True	AATAAA	-26	NA	89072134	89084235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.69	chr3	+	2921	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	9	-1	multi-exon	FALSE	canonical	0	0	junction_13	365.564194164858	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072134	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086374_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.7	chr3	+	3194	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	-17	-9	7	7	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCCTGGAATTTGAGGT	NA	False	NA	25	True	AATAAA	-26	NA	89072108	89084235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.70	chr3	+	4744	17	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	10	-4	intron_retention	FALSE	canonical	3	36	junction_10	328.252945293336	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTCACCCATTTCCT	NA	False	NA	12	True	ATTAAA	-16	NA	89072135	89090066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.71	chr3	+	8376	14	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2128	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	115	junction_2	306.3493577504	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072135	89090072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076004_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89086531_89086623_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.72	chr3	+	4188	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2128	13	NA	NA	10	-2	intron_retention	FALSE	canonical	2	4	junction_2	395.060868102844	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89072135	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89073988_89074122_89074341_89074512_89076004_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.73	chr3	+	4373	21	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-10	-3	multi-exon	FALSE	canonical	0	0	junction_16	335.008671529559	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCACCCATTTCCTG	NA	False	NA	13	True	ATTAAA	-17	NA	89072136	89090067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087345_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.74	chr3	+	2183	11	NIC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	-9	1	intron_retention	FALSE	canonical	3	39	junction_3	141.498409885058	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072137	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082779_89082951_89083043_89083700
ES.21887.75	chr3	+	1857	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	-148	176	-9	-174	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATCGATTCAACCCCTG	NA	False	NA	NA	False	NA	NA	NA	89072137	89084052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.76	chr3	+	2518	11	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	370	junction_2	61.7109390626978	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTTACACTTTAATGT	NA	False	NA	3	True	AATAAA	-17	NA	89072137	89083276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.79	chr3	+	3326	10	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	370	junction_2	69.268844652601	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072139	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89083043_89083700
ES.21887.8	chr3	+	4098	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	7	-2	multi-exon	FALSE	canonical	3	39	junction_3	327.410134421468	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCACCCATTTCCTGT	NA	False	NA	14	True	ATTAAA	-18	NA	89072108	89090068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.82	chr3	+	2212	13	NNC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.253587424779	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072142	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074512_89076004_89076231_89076819_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.83	chr3	+	2613	11	NNC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	-4	1	intron_retention	FALSE	non_canonical	0	0	junction_2	202.79250479246	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072142	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89072414_89074341_89074480_89076041_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.86	chr3	+	4819	19	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_11	342.82548290405	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072146	89090072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.87	chr3	+	3277	12	NIC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_2	197.683150772072	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89072148	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89073988_89074122_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.88	chr3	+	3225	10	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	6	1	intron_retention	FALSE	canonical	3	370	junction_2	64.728492781601	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072152	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.89	chr3	+	3428	18	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	18	-1	intron_retention	FALSE	canonical	3	36	junction_11	357.068824358442	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89072164	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89089351_89089605
ES.21887.9	chr3	+	5000	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	250	junction_3	303.332451572998	919	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	False	NA	16	True	ATTAAA	-20	NA	89072110	89090070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700_89084965_89085296_89085375_89086401_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.90	chr3	+	2086	11	NIC	ENSMUSG00000068917.13	novel	1885	12	NA	NA	20	1	intron_retention	FALSE	canonical	3	39	junction_3	146.400853822647	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072166	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.91	chr3	+	3864	9	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	20	1	intron_retention	FALSE	canonical	3	370	junction_2	66.9112051527993	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89072166	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89082548_89082698_89082779_89082951_89083043_89083700
ES.21887.94	chr3	+	3177	8	ISM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	4066	1	1721	-1	intron_retention	FALSE	canonical	3	448	junction_2	48.5319167020581	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89076191	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.95	chr3	+	3566	7	NIC	ENSMUSG00000068917.13	novel	3168	11	NA	NA	1985	-1	intron_retention	FALSE	canonical	3	448	junction_2	52.3948682813711	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCCCCCAATCCCTGG	NA	False	NA	15	True	AATAAA	-16	NA	89076455	89084225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89077423_89077599_89077717_89080683_89080851_89081503_89082382_89082464_89082548_89082698_89082779_89082951
ES.21887.96	chr3	+	2247	8	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	4804	1	2480	1	intron_retention	FALSE	canonical	3	448	junction_3	53.8561955202776	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCCCCAATCCCTGGAA	NA	False	NA	17	True	AATAAA	-18	NA	89076950	89084227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698
ES.21887.97	chr3	+	5567	14	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-2481	-1	intron_retention	FALSE	canonical	3	379	junction_8	306.557426302645	914	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCACCCATTTCCTGTA	NA	False	NA	15	True	ATTAAA	-19	NA	89076990	89090069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89085375_89086398_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.98	chr3	+	6245	13	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	-2138	-4	intron_retention	FALSE	canonical	3	448	junction_2	300.512987332587	914	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTCACCCATTTCCT	NA	False	NA	12	True	ATTAAA	-16	NA	89077333	89090066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ES.21887.99	chr3	+	289	1	Intergenic	novelGene_18107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAACATTGGGGCTG	NA	False	NA	NA	False	AATAAA	-7	NA	89078800	89079089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89078800_89079100
ES.21888.1	chr3	-	155	1	Antisense	novelGene_ENSMUSG00000068917.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	89079606	89079451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89079500_89079600
ES.21889.1	chr3	-	183	1	Intergenic	novelGene_18108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTTT	1932	False	NA	NA	False	NA	NA	NA	89100086	89099903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89099900_89100100
ES.2189.1	chr1	-	2670	1	Antisense	novelGene_ENSMUSG00000062510.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTAGAGTAAAGATACT	NA	False	NA	NA	False	NA	NA	NA	190804037	190801367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_190801400_190804000
ES.21890.1	chr3	+	2269	13	NNC	ENSMUSG00000028048.12	novel	1938	12	NA	NA	-1089	-98	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	128.602639509805	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTGTGCCTACGTCC	NA	False	NA	26	True	NA	NA	NA	89109145	89116175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89109348_89110304_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.10	chr3	+	1970	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	-191	0	-96	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTGCCTACGTCCAG	NA	False	NA	28	True	NA	NA	NA	89110234	89116177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.11	chr3	+	6528	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	0	-4749	0	264	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACGTTGAATGAAGAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	89110234	89120735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.12	chr3	+	2230	11	NNC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	95.8561422132145	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTATCTGTGACTAAAG	NA	False	NA	8	True	ATTAAA	-18	NA	89110234	89115993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89114120_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.13	chr3	+	2808	11	NIC	ENSMUSG00000028048.12	novel	1938	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_1	115.30932312697	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110234	89115988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.14	chr3	+	2131	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-12	-181	0	-104	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGGAAGCTGTGCCT	NA	False	NA	20	True	NA	NA	NA	89110234	89116169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.15	chr3	+	5324	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	0	-3545	0	-940	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTTTTCTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	89110234	89119531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.16	chr3	+	6633	12	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000167998.2	1938	12	-6	-4689	-2	206	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAAGGGAATGTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	89110240	89120677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.17	chr3	+	2378	10	NNC	ENSMUSG00000028048.12	novel	1938	12	NA	NA	2	0	intron_retention	FALSE	canonical	2	5	junction_5	133.508865937625	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110244	89115988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113676_89114066_89114120_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.19	chr3	+	5460	12	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000167998.2	1938	12	17	-3539	17	-944	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGACTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	89110263	89119527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.2	chr3	+	1817	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	-25	-13	-25	11	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGACTAAAGGAGGCA	NA	False	NA	14	True	ATTAAA	-24	NA	89110209	89115999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.20	chr3	+	3635	9	NIC	ENSMUSG00000028048.12	novel	1938	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	268	junction_1	31.3318926973779	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110263	89115988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89112888_89113098_89113272_89113440_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.21	chr3	+	2991	8	NIC	ENSMUSG00000028048.12	novel	1938	12	NA	NA	17	1	intron_retention	FALSE	canonical	3	268	junction_1	30.278974991413	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCTATCTGTGACT	NA	False	NA	4	True	ATTAAA	-14	NA	89110263	89115989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.22	chr3	+	3665	5	ISM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	312	-2	300	0	intron_retention	FALSE	canonical	3	310	junction_3	20.6215906273013	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110546	89115988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098
ES.21890.23	chr3	+	7887	5	Fusion	ENSMUSG00000028048.12_ENSMUSG00000105692.2	novel	1978	12	NA	NA	1066	150	intron_retention	FALSE	canonical	3	310	junction_2	20.3838171106395	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTTACATGTTTGCC	NA	False	NA	NA	False	AATACA	-15	NA	89111312	89120621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89111484_89111581_89111729_89112753_89112888_89113098_89115736_89115823
ES.21890.24	chr3	+	5720	3	Fusion	ENSMUSG00000028048.12_ENSMUSG00000105692.2	novel	1938	12	NA	NA	602	-946	intron_retention	FALSE	canonical	3	321	junction_2	9	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGTGACTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	89113393	89119525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89115295_89115618_89115736_89115823
ES.21890.3	chr3	+	2830	9	NIC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	-17	5	intron_retention	FALSE	canonical	3	268	junction_1	28.5326019668729	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTATCTGTGACTAAAG	NA	False	NA	8	True	ATTAAA	-18	NA	89110217	89115993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.4	chr3	+	1959	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	-18	-3	-6	3	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTATCTGTGACTAA	NA	False	NA	6	True	ATTAAA	-16	NA	89110228	89115991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.5	chr3	+	2019	11	NNC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	-5	11	intron_retention	FALSE	canonical	2	5	junction_6	126.746045303197	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGACTAAAGGAGGCA	NA	False	NA	14	True	ATTAAA	-24	NA	89110229	89115999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113676_89114066_89114120_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.6	chr3	+	2130	10	NIC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	-5	-110	intron_retention	FALSE	canonical	3	268	junction_1	26.9187162389037	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTGCCTGTGGAAGCT	NA	False	NA	14	True	NA	NA	NA	89110229	89116163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.7	chr3	+	5747	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	-5	-3963	-5	-522	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTCCTCCATTGTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	89110229	89119949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.8	chr3	+	6133	11	FSM	ENSMUSG00000028048.12_ENSMUSG00000105692.2	ENSMUST00000077367.11	1779	11	-5	-4349	-5	-136	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTCTATGGTCTATAC	NA	False	NA	NA	False	AGTAAA	-1	NA	89110229	89120335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21890.9	chr3	+	6757	11	Fusion	ENSMUSG00000028048.12_ENSMUSG00000105692.2	novel	1938	12	NA	NA	-3	152	intron_retention	FALSE	canonical	3	34	junction_1	116.587992520671	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTACATGTTTGCCTT	NA	False	NA	NA	False	AATACA	-17	NA	89110231	89120623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ES.21891.1	chr3	+	4691	22	NIC	ENSMUSG00000028047.12	novel	3190	23	NA	NA	-1261	-2	intron_retention	FALSE	canonical	0	0	junction_10	2.90280964840537	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	4516	False	NA	3	True	CATAAA	-17	NA	89121225	89134142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89122632_89123987_89124195_89124991_89125249_89125334_89125438_89126163_89126191_89126353_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ES.21891.2	chr3	+	2546	1	Genic_Genomic	ENSMUSG00000028047.12	novel	NA	NA	NA	NA	-1159	-1519	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACATAAAAAA	4618	False	NA	NA	False	NA	NA	NA	89121327	89123873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89121300_89123900
ES.21891.3	chr3	+	5220	19	NNC	ENSMUSG00000028047.12	novel	4034	21	NA	NA	-1005	-2	intron_retention	FALSE	canonical	0	0	junction_8	2.98142396999972	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	7012	False	NA	3	True	CATAAA	-17	NA	89123721	89134142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89125249_89125334_89125438_89126163_89126191_89126353_89126437_89126519_89126565_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89133751_89133832
ES.21891.4	chr3	+	3202	20	NNC	ENSMUSG00000028047.12	novel	3190	23	NA	NA	130	-2	intron_retention	FALSE	canonical	0	0	junction_8	3.04990804093693	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	8147	False	NA	3	True	CATAAA	-17	NA	89124856	89134142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89125249_89125334_89125438_89126163_89126191_89126353_89126437_89126519_89126565_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130831_89130941_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ES.21891.5	chr3	+	4203	16	NIC	ENSMUSG00000028047.12	novel	3190	23	NA	NA	231	-3	intron_retention	FALSE	canonical	0	0	junction_4	3.33599893418581	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGTGCAATTGTTTA	8248	False	NA	2	True	CATAAA	-16	NA	89124957	89134141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89126191_89126353_89126437_89126519_89126845_89127161_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ES.21891.6	chr3	+	2717	9	NIC	ENSMUSG00000028047.12	novel	2993	22	NA	NA	403	-2	intron_retention	FALSE	canonical	0	0	junction_1	4.24264068711928	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	NA	False	NA	3	True	CATAAA	-17	NA	89128861	89134142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89132314_89132558_89133751_89133832
ES.21892.1	chr3	-	161	1	Intergenic	novelGene_18109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	89109915	89109754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89109800_89109900
ES.21893.1	chr3	-	1540	7	NIC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	739	junction_1	41.4286535302963	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGAATCCCTTCTTTC	NA	False	NA	-17	True	AATAAA	-20	NA	89121214	89116388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89116729_89116811_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21893.10	chr3	-	1439	9	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	347.03509818893	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGATCAAAGAATCCC	NA	False	NA	-24	True	AATAAA	-13	NA	89121224	89116395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89118513_89118857_89119989_89120070_89120183_89120254_89121119
ES.21893.11	chr3	-	1154	8	NIC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	281.170367411298	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGATCAAAGAATCCC	NA	False	NA	-24	True	AATAAA	-13	NA	89121207	89116395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89116729_89116811_89116967_89117338_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21893.14	chr3	-	3714	3	NNC	ENSMUSG00000064068.16	novel	599	4	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	369.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGGATCAAAGAATCC	NA	False	NA	-25	True	AATAAA	-12	NA	89121206	89116396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89116729_89116811_89116991_89118003
ES.21893.15	chr3	-	1064	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	280.216097368602	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACTGGGATCAAAGAATC	NA	False	NA	-26	True	AATAAA	-11	NA	89121206	89116397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121131
ES.21893.17	chr3	-	4220	2	NIC	ENSMUSG00000064068.16	novel	1197	7	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAACTGGGATCAAAGAAT	NA	False	NA	-27	True	AATAAA	-10	NA	89121224	89116398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89116967_89117572
ES.21893.2	chr3	-	1088	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	282.860317442503	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGAATCCCTTCTTTC	NA	False	NA	-17	True	AATAAA	-20	NA	89121216	89116388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89116722_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21893.3	chr3	-	1540	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	-19	1	3	-1	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGAATCCCTTCTTTC	NA	False	NA	-17	True	AATAAA	-20	NA	89121661	89116388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21893.5	chr3	-	4071	5	ISM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	6	-8	6	2	intron_retention	FALSE	canonical	3	739	junction_1	49.7719800691112	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAAGAATCCCTTCTT	NA	False	NA	-19	True	AATAAA	-18	NA	89121208	89116390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890
ES.21893.6	chr3	-	1210	7	FSM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	-5	-8	0	2	multi-exon	FALSE	canonical	3	739	junction_1	41.3417330174835	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAAGAATCCCTTCTT	NA	False	NA	-19	True	AATAAA	-18	NA	89121219	89116390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120254_89121119
ES.21893.7	chr3	-	4605	3	NIC	ENSMUSG00000064068.16	novel	599	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	739	junction_1	67.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATCAAAGAATCCCTTC	NA	False	NA	-21	True	AATAAA	-16	NA	89121215	89116392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89116729_89116811_89117756_89117890
ES.21893.8	chr3	-	1608	6	NIC	ENSMUSG00000064068.16	novel	775	7	NA	NA	8	-1	intron_retention	FALSE	canonical	3	739	junction_1	44.7007829909052	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGATCAAAGAATCCCT	NA	False	NA	-23	True	AATAAA	-14	NA	89121206	89116394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89116729_89116811_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21893.9	chr3	-	1121	8	NNC	ENSMUSG00000064068.16	novel	1522	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	280.477071710153	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGATCAAAGAATCCC	NA	False	NA	-24	True	AATAAA	-13	NA	89121194	89116395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89116729_89116811_89116967_89117358_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ES.21894.1	chr3	-	173	1	Intergenic	novelGene_18110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89128246	89128073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89128100_89128200
ES.21895.1	chr3	+	2723	7	FSM	ENSMUSG00000042784.10	ENSMUST00000041142.4	2242	7	-486	5	-486	-5	multi-exon	FALSE	canonical	2	4	junction_5	1.60727512683216	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGCCAGCTGTGGTTT	NA	False	NA	3	True	AATAAA	-16	NA	89135877	89140683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89136485_89137217_89138522_89138619_89138673_89138807_89138942_89139069_89139192_89139272_89139423_89140330
ES.21896.1	chr3	-	2475	9	ISM	ENSMUSG00000042766.18	ENSMUST00000143637.2	2444	11	2182	-688	1323	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0.992156741649222	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCTGTTTTCCTGGAG	9181	False	NA	NA	False	AATAAA	-15	NA	89150997	89141486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89142600_89143609_89143908_89144923_89145227_89145972_89146011_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890
ES.21897.1	chr3	+	557	5	NNC	ENSMUSG00000042747.13	novel	426	2	NA	NA	-2127	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	794.759200953345	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGAACTGTGACAGT	4996	False	NA	25	True	AATAAA	-19	NA	89151145	89157034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89151260_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ES.21897.2	chr3	+	589	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	417	166	-51	18	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTGACCTCATCTGC	7540	False	NA	38	True	AATAAA	-32	NA	89153689	89157047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ES.21897.3	chr3	+	562	5	NNC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	-40	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	794.759200953345	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAACTGTGACAGTTGAC	7551	False	NA	29	True	AATAAA	-23	NA	89153700	89157038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89153823_89154091_89154240_89154371_89154436_89156380_89156448_89156877
ES.21897.4	chr3	+	618	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	-7	13	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	697.396945791993	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGACAGTTGACCTCA	7584	False	NA	33	True	AATAAA	-27	NA	89153733	89157042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89153901_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ES.21897.6	chr3	+	774	4	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	1794	junction_2	31.5418593124896	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	7599	False	NA	20	True	AATAAA	-14	NA	89153748	89157029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89154240_89154371_89154436_89156380_89156448_89156877
ES.21897.8	chr3	+	859	3	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	55	0	intron_retention	FALSE	canonical	3	1794	junction_1	38.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	7646	False	NA	20	True	AATAAA	-14	NA	89153795	89157029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89154436_89156380_89156448_89156877
ES.21898.1	chr3	+	713	4	NNC	ENSMUSG00000042737.10	novel	404	2	NA	NA	-7821	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	252.672823143993	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTAGTTTTGAGTAT	NA	False	NA	19	True	ATTAAA	-20	NA	89158843	89174386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89158940_89164367_89164421_89173700_89173914_89174035
ES.21899.1	chr3	-	187	1	Intergenic	novelGene_18111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATAAAAAGGGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	89173302	89173115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89173100_89173300
ES.219.1	chr1	-	1277	1	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCCAGGAAATCCAG	NA	False	NA	NA	False	NA	NA	NA	32112780	32111503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_32111500_32112800
ES.2190.1	chr1	-	164	1	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTAGTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	190820628	190820464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_190820500_190820600
ES.21900.1	chr3	-	1382	6	Fusion	ENSMUSG00000027953.14_ENSMUSG00000027954.10	novel	1022	6	NA	NA	-1976	2	multi-exon	FALSE	canonical	0	0	junction_5	59.7280503616182	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGTGATGTGTTCTTC	8765	False	NA	-29	True	AATAAA	-19	NA	89179853	89175550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89179310
ES.21900.10	chr3	-	1581	4	NIC	ENSMUSG00000027954.10	novel	1480	5	NA	NA	28	-1	intron_retention	FALSE	canonical	3	15	junction_1	2.35702260395516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTCTGCCCCACCAT	1698	False	NA	NA	False	AATAAA	-20	NA	89186920	89179040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89179912_89180078_89180330_89183436_89183733_89186757
ES.21900.11	chr3	-	1502	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	-23	1	-23	-1	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTCTGCCCCACCAT	1643	False	NA	NA	False	AATAAA	-20	NA	89186975	89179040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ES.21900.3	chr3	-	1158	5	NNC	ENSMUSG00000027953.14	novel	1176	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	75.7805219037188	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177834	89175552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177447_89177711
ES.21900.4	chr3	-	1009	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	13	0	12	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177864	89175552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ES.21900.5	chr3	-	1083	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	2	1	2	-1	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGAGTGATGTGTTC	NA	False	NA	-32	True	AATAAA	-16	NA	89177828	89175553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
ES.21900.6	chr3	-	1061	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	57.1195238075389	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177831	89175554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89175906_89175979_89176100_89176356_89176606_89177133_89177258_89177368_89177447_89177692
ES.21900.7	chr3	-	899	6	NIC	ENSMUSG00000027953.14	novel	1022	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	58.1425833619388	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177886	89175554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177822
ES.21900.8	chr3	-	2277	1	NIC	ENSMUSG00000027953.14	novel	1176	5	NA	NA	-1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177831	89175554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89175600_89177800
ES.21900.9	chr3	-	1660	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	35	-215	31	215	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTAGAGGGTTACCTA	1701	False	NA	NA	False	AATAAA	-19	NA	89186917	89178824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ES.21901.1	chr3	+	1401	4	NNC	ENSMUSG00000086389.2	novel	1844	3	NA	NA	23	1331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGAATGATAGTCGT	7551	False	NA	NA	False	NA	NA	NA	89222768	89227545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89222901_89223309_89223426_89225134_89225315_89226572
ES.21902.1	chr3	-	2334	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	29	0	29	0	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGTCTCTTAACTGT	9218	False	NA	NA	False	NA	NA	NA	89230243	89221205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
ES.21902.2	chr3	-	2438	4	NIC	ENSMUSG00000028039.12	novel	2363	5	NA	NA	26	-5	intron_retention	FALSE	canonical	3	176	junction_1	14.7044966667419	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAATGTCTCTTA	9293	False	NA	NA	False	NA	NA	NA	89230168	89221210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89222875_89223114_89223443_89223769_89224060_89230012
ES.21902.3	chr3	-	2237	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	-35	-1460	-35	-5	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAATGTCTCTTA	9232	False	NA	NA	False	NA	NA	NA	89230229	89221210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
ES.21902.5	chr3	-	1755	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	26	582	26	-582	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGTGTGTGTGGTTTC	9215	False	NA	NA	False	AATAAA	-15	NA	89230246	89221787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
ES.21902.6	chr3	-	1918	4	NIC	ENSMUSG00000028039.12	novel	2363	5	NA	NA	-37	-588	intron_retention	FALSE	canonical	3	176	junction_1	14.7044966667419	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTGAGTGTGTGT	9230	False	NA	NA	False	AATAAA	-9	NA	89230231	89221793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89222875_89223114_89223443_89223769_89224060_89230012
ES.21902.7	chr3	-	1749	5	NNC	ENSMUSG00000028039.12	novel	2363	5	NA	NA	-28	-588	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	83.1775210017707	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTGAGTGTGTGT	9239	False	NA	NA	False	AATAAA	-9	NA	89230222	89221793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89229988
ES.21902.8	chr3	-	3158	5	NNC	ENSMUSG00000028039.12	novel	2363	5	NA	NA	2112	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.6073411848505	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTGAGTGTGTGT	560	False	NA	NA	False	AATAAA	-9	NA	89226826	89221793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89225183
ES.21902.9	chr3	-	1650	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	-32	-876	-32	-589	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATACCTGAGTGTGTG	9235	False	NA	NA	False	AATAAA	-8	NA	89230226	89221794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
ES.21903.1	chr3	+	3741	17	Fusion	ENSMUSG00000097004.2_ENSMUSG00000109293.2	novel	2820	2	NA	NA	-63	91	intron_retention	FALSE	canonical	0	0	junction_2	3.48153611930136	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGAATCTTAAATTAT	1258	False	NA	NA	False	AATAAA	-19	NA	89245093	89284947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89245325_89252486_89252684_89270839_89270950_89271586_89271693_89272490_89272768_89272895_89272939_89273048_89273220_89273526_89273629_89273955_89275242_89275397_89275556_89276011_89276177_89277734_89277903_89278006_89278108_89278839_89278971_89279954_89280083_89280731_89280888_89284736
ES.21903.2	chr3	+	3245	15	Fusion	ENSMUSG00000097004.2_ENSMUSG00000109293.2	novel	2820	2	NA	NA	-58	91	intron_retention	TRUE	canonical	0	0	junction_2	4.93891254658929	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGAATCTTAAATTAT	1263	False	NA	NA	False	AATAAA	-19	NA	89245098	89284947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89245325_89252486_89252684_89255186_89255243_89271586_89271693_89273048_89273220_89273526_89273629_89273955_89275242_89275397_89275556_89276011_89276177_89278049_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280731_89280888_89284736
ES.21903.3	chr3	+	1250	1	ISM	ENSMUSG00000097004.2	ENSMUST00000180791.2	2820	2	8730	2	8730	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACCTCCCAGTAATTA	7441	False	NA	NA	False	NA	NA	NA	89253886	89255136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89253900_89255100
ES.21903.4	chr3	+	2921	12	NNC	ENSMUSG00000109293.2	novel	2285	16	NA	NA	3715	86	intron_retention	FALSE	canonical	0	0	junction_2	5.1889902519383	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACAAATATGAATCTTAA	1089	False	NA	NA	False	AATAAA	-14	NA	89272996	89284942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89273220_89273526_89273629_89273955_89275242_89275397_89275556_89276011_89276177_89278006_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280731_89280888_89282667_89282839_89284736
ES.21903.5	chr3	+	1650	11	NNC	ENSMUSG00000109293.2	novel	2285	16	NA	NA	3733	-3102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.9598387070549	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCACTGTGTCTGCTTC	1107	False	NA	NA	False	AGTAAA	-16	NA	89273014	89281754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89273220_89273526_89273629_89275027_89275242_89275397_89275556_89276011_89276177_89278006_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280731_89280888_89281558
ES.21903.6	chr3	+	929	6	NNC	ENSMUSG00000109293.2	novel	2285	16	NA	NA	8638	102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	4.95580467734555	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTATTATTATTTCTT	6012	False	NA	NA	False	AATAAA	-30	NA	89277919	89284958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89278108_89278839_89278971_89279954_89280083_89280529_89280624_89280721_89280888_89284736
ES.21903.7	chr3	+	2040	2	Genic_Genomic	ENSMUSG00000109293.2	novel	2285	16	NA	NA	12068	86	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACAAATATGAATCTTAA	9442	False	NA	NA	False	AATAAA	-14	NA	89281349	89284942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89282001_89283553
ES.21904.1	chr3	+	3170	13	Fusion	ENSMUSG00000042626.14_ENSMUSG00000074466.13	novel	2617	12	NA	NA	362	0	multi-exon	TRUE	canonical	0	0	junction_1	157.005750071631	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	5739	False	NA	32	True	ATTAAA	-29	NA	89299638	89337334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89299814_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.10	chr3	+	3113	13	NNC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.66493609506	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89325700	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89325837_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334749_89335623
ES.21904.12	chr3	+	3423	14	NNC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	208.627609126742	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325700	89337322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326017_89329484_89329653_89330003_89330128_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.14	chr3	+	3432	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-46	-1	intron_retention	FALSE	canonical	3	256	junction_1	93.6048490656069	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89325703	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334754_89335623
ES.21904.15	chr3	+	3124	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-28	2	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGGAAAGTCTGATT	NA	False	NA	34	True	ATTAAA	-31	NA	89325721	89337336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.16	chr3	+	2932	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	-16	334	-16	-334	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTCCAAACTTTTAT	NA	False	NA	NA	False	NA	NA	NA	89325733	89336988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.17	chr3	+	2876	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-15	-335	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	168.084640229236	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTTTCCAAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	89325734	89336987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.18	chr3	+	3244	13	NNC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	171.607170110498	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89325741	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333834_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.19	chr3	+	2962	11	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	53	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	170.511114007269	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTCAACTCCTCTGGA	NA	False	NA	24	True	ATTAAA	-21	NA	89325802	89337326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.2	chr3	+	261	2	FSM	ENSMUSG00000074466.13	ENSMUST00000145400.8	923	2	587	75	467	3	multi-exon	FALSE	canonical	3	16	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGCTTCCCTTCTTGGGC	5844	False	NA	NA	False	ACTAAA	-28	NA	89299743	89305456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89299814_89305265
ES.21904.20	chr3	+	2679	12	NIC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-40	-335	combination_of_known_junctions	FALSE	canonical	3	123	junction_1	129.584906273394	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTTTTCCAAACTTTTA	NA	False	NA	NA	False	NA	NA	NA	89325817	89336987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.21	chr3	+	3098	12	NIC	ENSMUSG00000042626.14	novel	3154	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	168.084640229236	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCCTCTGGAAAGTCT	NA	False	NA	30	True	ATTAAA	-27	NA	89325857	89337332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.22	chr3	+	6983	14	Fusion	ENSMUSG00000042626.14_ENSMUSG00000047824.14	novel	3154	13	NA	NA	2	3	intron_retention	FALSE	canonical	3	256	junction_1	111.217628758869	974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89325859	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89338484_89339756
ES.21904.23	chr3	+	3136	11	NIC	ENSMUSG00000042626.14	novel	3154	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	123	junction_1	135.723395182997	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89325866	89337334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.25	chr3	+	4135	11	ISM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	13	13	-7	-1	intron_retention	FALSE	canonical	3	256	junction_1	97.3767939500988	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89325870	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245
ES.21904.27	chr3	+	3129	12	NNC	ENSMUSG00000042626.14	novel	3154	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	195.485452101866	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89325888	89337334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326017_89330232_89330304_89330640_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.28	chr3	+	7790	11	Fusion	ENSMUSG00000042626.14_ENSMUSG00000047824.14	novel	3154	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	123	junction_1	154.150705480059	974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89325888	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89338484_89339756
ES.21904.29	chr3	+	6784	13	Fusion	ENSMUSG00000042626.14_ENSMUSG00000047824.14	novel	3154	13	NA	NA	-10	3	intron_retention	FALSE	canonical	3	123	junction_1	142.626746751403	974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89325890	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89326017_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89338484_89339756
ES.21904.3	chr3	+	277	2	FSM	ENSMUSG00000074466.13	ENSMUST00000126926.2	925	2	5	643	5	-10	multi-exon	FALSE	canonical	1	1	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGGGATGAATCGCT	7702	False	NA	NA	False	ACTAAA	-15	NA	89301601	89305443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89301701_89305265
ES.21904.31	chr3	+	3124	13	NNC	ENSMUSG00000042626.14	novel	3250	13	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.005750071631	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCGGCCTCTCAACTC	NA	False	NA	17	True	ATTAAA	-14	NA	89325892	89337319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326017_89329464_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.33	chr3	+	3353	14	NNC	ENSMUSG00000042626.14	novel	3154	13	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.231798397745	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGGAAAGTCTGATT	NA	False	NA	34	True	ATTAAA	-31	NA	89325892	89337336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326017_89326284_89326517_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.35	chr3	+	2361	13	FSM	ENSMUSG00000042626.14	ENSMUST00000107417.9	3079	13	56	662	56	254	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCCCATGTTTGCATG	NA	False	NA	NA	False	NA	NA	NA	89325976	89336660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.36	chr3	+	3097	13	NNC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	514	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.005750071631	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89326434	89337334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89326537_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.37	chr3	+	4806	11	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	301	-1	intron_retention	FALSE	canonical	3	509	junction_6	35.5146448665899	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89328240	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.38	chr3	+	3850	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	-303	-930	-303	2	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGGAAAGTCTGATT	NA	False	NA	34	True	ATTAAA	-31	NA	89328631	89337336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.39	chr3	+	1542	13	NNC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	-38	-612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.005750071631	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTATTCTCTAACTTGTG	NA	False	NA	NA	False	NA	NA	NA	89328896	89335794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89328984_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.4	chr3	+	178	1	Intergenic	novelGene_18113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1698	False	NA	NA	False	NA	NA	NA	89304590	89304768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89304600_89304800
ES.21904.42	chr3	+	3669	11	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	501	junction_1	38.4452857968308	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89328934	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334754_89335623
ES.21904.43	chr3	+	3115	13	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	152.973558898988	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89328935	89337334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89329056_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.44	chr3	+	2415	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	1	201	1	-201	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTCTGCAGATACTTAA	NA	False	NA	NA	False	NA	NA	NA	89328935	89336205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.45	chr3	+	3762	10	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	1	-613	intron_retention	FALSE	canonical	3	501	junction_1	37.0698373277544	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTATTCTCTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	89328935	89335793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89334009_89334094_89334165_89334245_89334754_89335623
ES.21904.46	chr3	+	1993	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	2	622	2	-622	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCGTCTCCCGTATTCT	NA	False	NA	NA	False	NA	NA	NA	89328936	89335784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.47	chr3	+	3450	13	NNC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.005750071631	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCGGCCTCTCAACTCC	NA	False	NA	18	True	ATTAAA	-15	NA	89328936	89337320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89329042_89329120_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.49	chr3	+	3521	12	NNC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_8	159.709084699453	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89328938	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334101_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.5	chr3	+	3311	14	NNC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	-9755	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	201.938094679633	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89315994	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89316090_89316212_89316447_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.50	chr3	+	2923	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	13	-319	-1	319	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCTCCCTCCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	89328947	89336725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.51	chr3	+	3181	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	14	-578	0	-338	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGATGACTTTTCCAAACTT	NA	False	NA	NA	False	NA	NA	NA	89328948	89336984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.52	chr3	+	4136	10	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	97	-3	intron_retention	FALSE	canonical	3	509	junction_6	35.6962494139401	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCGGCCTCTCAACTC	NA	False	NA	17	True	ATTAAA	-14	NA	89329045	89337319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334754_89335623
ES.21904.55	chr3	+	2889	3	FSM	ENSMUSG00000047824.14	ENSMUST00000136573.8	584	3	83	-2388	36	3	multi-exon	FALSE	canonical	3	4	junction_1	130	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337603	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89337761_89338433_89338484_89339756
ES.21904.56	chr3	+	3165	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	36	-3	36	3	multi-exon	FALSE	canonical	3	239	junction_1	12.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337603	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89338037_89338433_89338484_89339756
ES.21904.57	chr3	+	3152	3	NIC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	131	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337723	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89338037_89338326_89338484_89339756
ES.21904.58	chr3	+	4715	1	Genic_Genomic	ENSMUSG00000047824.14	novel	NA	NA	NA	NA	-7	3	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337723	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89337700_89342400
ES.21904.59	chr3	+	4039	2	ISM	ENSMUSG00000047824.14	ENSMUST00000136573.8	584	3	203	-2385	-7	0	intron_retention	FALSE	canonical	3	4	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337723	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89337761_89338433
ES.21904.6	chr3	+	3139	13	NNC	ENSMUSG00000042626.14	novel	748	6	NA	NA	-9751	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	209.766718973456	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	False	NA	19	True	ATTAAA	-16	NA	89315998	89337321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89316090_89316212_89316447_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.60	chr3	+	1584	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	161	1453	-2	683	multi-exon	FALSE	canonical	3	239	junction_1	12.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCTTGTCTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	89337728	89340982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89338037_89338433_89338484_89339756
ES.21904.61	chr3	+	2976	4	NNC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.99673198127	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAAGGACTCCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	89337730	89342433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89338037_89338433_89338484_89339756_89339943_89339999
ES.21904.62	chr3	+	3144	3	FSM	ENSMUSG00000047824.14	ENSMUST00000133680.2	382	3	-316	-2446	0	0	multi-exon	FALSE	canonical	1	1	junction_1	131.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337730	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89338146_89338433_89338484_89339756
ES.21904.63	chr3	+	2866	3	NIC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	132	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337730	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89337761_89338326_89338484_89339756
ES.21904.64	chr3	+	2988	4	NNC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	118.99673198127	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGACTCCTTTGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	89337730	89342436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89338037_89338433_89338484_89339756_89340363_89340410
ES.21904.65	chr3	+	4307	2	ISM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	164	0	1	0	intron_retention	FALSE	canonical	3	239	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337731	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89338037_89338433
ES.21904.66	chr3	+	3214	3	NNC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337763	89342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89338146_89338330_89338484_89339756
ES.21904.67	chr3	+	2896	4	NNC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	72	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.99673198127	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	89337802	89342438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89337855_89337924_89338037_89338433_89338484_89339756
ES.21904.7	chr3	+	3499	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	-234	-15	-234	3	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGAAAGTCTGATTG	NA	False	NA	35	True	ATTAAA	-32	NA	89325515	89337337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21904.8	chr3	+	1776	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	-51	1525	-51	-609	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTCTAACTTGTGGGA	NA	False	NA	NA	False	NA	NA	NA	89325698	89335797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ES.21905.1	chr3	-	3948	3	ISM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	21	-5	21	5	intron_retention	FALSE	canonical	3	34	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTGTGGCCCTCCC	1633	False	NA	NA	False	AATAAA	-19	NA	89245314	89240691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89241740_89242088_89242158_89242483
ES.21905.2	chr3	-	1545	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	56	-2	56	2	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTGTGTGGCCCT	1668	False	NA	NA	False	AATAAA	-16	NA	89245279	89240694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ES.21905.3	chr3	-	3072	4	NNC	ENSMUSG00000028040.8	novel	1599	4	NA	NA	-63	-349	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	15.7973274814304	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCTCACACCTGTA	1549	False	NA	-11	True	AATAAA	-19	NA	89245398	89241045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89241740_89242088_89242158_89242483_89242780_89243385
ES.21905.4	chr3	-	1313	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	-63	349	-63	-349	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCTCACACCTGTA	1549	False	NA	-11	True	AATAAA	-19	NA	89245398	89241045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ES.21905.5	chr3	-	3552	3	ISM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	61	351	61	-351	intron_retention	FALSE	canonical	3	34	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGTGGCTCACACCTG	1673	False	NA	-13	True	AATAAA	-17	NA	89245274	89241047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89241740_89242088_89242158_89242483
ES.21906.1	chr3	-	3917	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	-6	-1112	1	6	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCTTGGTAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	89257288	89245842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.10	chr3	-	3645	24	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	3	-469	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	41.100089918446	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGCTTCAGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	89257286	89246317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.11	chr3	-	3196	22	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	29.5133622068519	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTGGGTAGTTCCTG	NA	False	NA	-3	True	AATAAA	-28	NA	89257295	89246938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.12	chr3	-	2899	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	34.6357135491854	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAAGCTGGGTAGTTCCT	NA	False	NA	-4	True	AATAAA	-27	NA	89257301	89246939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.13	chr3	-	6184	12	NIC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_4	15.9958672348529	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257282	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89248885_89249243_89251518_89251731_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.14	chr3	-	6845	9	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_2	38.123975396068	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257289	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89249669_89250419_89253145_89253249_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.15	chr3	-	4860	16	NIC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_6	17.4297319415864	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257282	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89252671_89252799_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.16	chr3	-	3003	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	33.4334172412835	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257337	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.17	chr3	-	2832	21	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	30.6652898241644	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257313	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.18	chr3	-	3121	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.4195073342773	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257299	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250260_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252961_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.19	chr3	-	5104	15	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	114	junction_3	18.830744509326	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257287	89246946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89249669_89250419_89251285_89251424_89251518_89251731_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.2	chr3	-	3838	23	NIC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	0	6	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	41.53112941811	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCTTGGTAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	89257282	89245842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89246174_89246318_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.20	chr3	-	3026	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	40.1852515525789	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTCCTGGAAGCTGGG	NA	False	NA	-12	True	AATAAA	-19	NA	89257291	89246947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.21	chr3	-	2827	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	-21	-7	0	0	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTCCTGGAAGCTGGG	NA	False	NA	-12	True	AATAAA	-19	NA	89257303	89246947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.22	chr3	-	2798	21	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	41.6402449560518	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCCTGGAAGCTGG	NA	False	NA	-13	True	AATAAA	-18	NA	89257275	89246948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252976_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.23	chr3	-	2977	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	-4	2	-4	-1	multi-exon	FALSE	canonical	3	47	junction_3	32.1478056009843	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCCTGGAAGCTGG	NA	False	NA	-13	True	AATAAA	-18	NA	89257307	89246948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.24	chr3	-	3034	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	39.5830542254913	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCCTGGAAGCTGG	NA	False	NA	-13	True	AATAAA	-18	NA	89257302	89246948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.25	chr3	-	3022	23	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.5986805666731	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257289	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.26	chr3	-	4056	19	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_13	43.1786412677425	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257264	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254062_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.27	chr3	-	3774	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	0	intron_retention	FALSE	canonical	2	5	junction_21	41.674040163905	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257264	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89256976
ES.21906.28	chr3	-	2989	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	46.5047984727569	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257302	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249362_89249617_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.29	chr3	-	2961	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	41.136740329767	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257262	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255966_89257115
ES.21906.3	chr3	-	4869	22	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	-2	6	intron_retention	FALSE	canonical	1	2	junction_1	37.6099446490943	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCTTGGTAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	89257284	89245842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89246174_89246318_89247261_89247361_89247481_89247707_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.30	chr3	-	3056	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.41299449171	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257307	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248107_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.31	chr3	-	2838	22	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	40.5332371105195	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257302	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247430_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.32	chr3	-	4817	17	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	22	junction_3	37.3511629671688	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257270	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89255253_89255824_89255935_89257115
ES.21906.33	chr3	-	3273	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	50.5722265133537	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257315	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254449_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.34	chr3	-	4931	17	NIC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	112	junction_6	18.5883658170911	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257304	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251907_89252012_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.35	chr3	-	4541	18	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	59	junction_2	25.4257858921862	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257294	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247487_89247707_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.36	chr3	-	2901	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.4743876217402	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257311	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.37	chr3	-	2881	22	FSM	ENSMUSG00000028041.18	ENSMUST00000107448.9	2893	22	8	4	1	0	multi-exon	FALSE	canonical	3	22	junction_3	33.3036602620203	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257288	89246950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.38	chr3	-	3700	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	22	junction_3	33.3036602620203	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTGCTCCTGGAAGC	NA	False	NA	-16	True	AATAAA	-15	NA	89257313	89246951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.39	chr3	-	3468	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	43.1726306015495	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257294	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247780_89248019_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.4	chr3	-	4393	22	NIC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	-1	6	intron_retention	FALSE	canonical	1	2	junction_1	38.7329949520972	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCTTGGTAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	89257283	89245842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89246174_89246318_89247261_89247361_89247487_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.40	chr3	-	3058	22	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	-2	intron_retention	FALSE	canonical	3	47	junction_3	32.7924829614275	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257303	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.41	chr3	-	4027	20	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	59	junction_2	24.6787672148861	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257312	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247487_89247707_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.42	chr3	-	4139	20	NIC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	18.4730094343701	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257292	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.43	chr3	-	3536	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_6	45.3191254246118	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257282	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250205_89250315_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.44	chr3	-	3314	22	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	-2	intron_retention	FALSE	canonical	3	46	junction_2	29.6433065561649	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257264	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.46	chr3	-	3258	26	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	55.4672371765531	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257288	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89253965_89254075_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.47	chr3	-	4282	17	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	3	-2	intron_retention	FALSE	canonical	3	21	junction_2	33.8812263650535	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257286	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89252671_89252799_89252970_89253075_89253145_89253249_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.48	chr3	-	3123	25	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	47.7741903530441	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257262	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.5	chr3	-	4319	23	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	-2	5	intron_retention	FALSE	canonical	1	2	junction_1	38.9717263480264	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCCTTGGTAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	89257305	89245843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89246174_89246318_89247261_89247361_89247481_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.50	chr3	-	4283	20	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	35.3338646974801	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257315	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254062_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.51	chr3	-	2377	19	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2144	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.3357313528124	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89254270	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248068_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183
ES.21906.52	chr3	-	3265	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	11	junction_5	48.1038180988784	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257309	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.53	chr3	-	3239	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	38.9827255661015	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGCTCCTGGAAG	NA	False	NA	-17	True	AATAAA	-14	NA	89257288	89246952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.54	chr3	-	3156	25	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.9434019784304	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257267	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248107_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.56	chr3	-	2896	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	174	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_22	40.6220230949983	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257092	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89256976
ES.21906.57	chr3	-	2689	21	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1202	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.5342884333692	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89255212	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175
ES.21906.58	chr3	-	3130	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-9	1	intron_retention	FALSE	canonical	3	21	junction_4	41.0634713301975	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257312	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.59	chr3	-	3522	17	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	4	1	intron_retention	FALSE	canonical	3	21	junction_2	33.6647070386778	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257262	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.6	chr3	-	5213	20	NIC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	-10	5	intron_retention	FALSE	canonical	1	2	junction_1	34.7803555213846	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCCTTGGTAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	89257313	89245843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89246174_89246318_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.60	chr3	-	3156	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	47.408772209578	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257312	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254062_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.61	chr3	-	4459	19	NNC	ENSMUSG00000028041.18	novel	2799	21	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.2504836903199	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257337	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89248885_89249243_89249383_89249595_89249669_89250205_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255824_89255935_89256976
ES.21906.62	chr3	-	3223	25	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	52.1168558785607	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257337	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255955_89257115
ES.21906.63	chr3	-	3920	21	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	2	1	intron_retention	FALSE	canonical	3	46	junction_2	26.4489602820224	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTCTGCTCCTGGAA	NA	False	NA	-18	True	AATAAA	-13	NA	89257301	89246953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.64	chr3	-	1633	9	NIC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-102	0	intron_retention	FALSE	canonical	3	59	junction_2	41.3967088063773	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89251088	89246954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247487_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979
ES.21906.65	chr3	-	3463	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-5	0	intron_retention	FALSE	canonical	3	11	junction_3	39.9548557232756	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89257272	89246954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.66	chr3	-	3253	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	36.4424146672097	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89257291	89246954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.67	chr3	-	2960	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	45.3643650879709	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89257288	89246954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247430_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.68	chr3	-	3151	25	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	47.0911497936596	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTCTGCTCCTGG	NA	False	NA	-20	True	AATAAA	-11	NA	89257287	89246955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.7	chr3	-	3879	24	FSM	ENSMUSG00000028041.18	ENSMUST00000184651.8	3914	24	38	-3	15	3	multi-exon	FALSE	canonical	1	2	junction_1	40.1114232606179	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACAGCCTTGGTAAAGT	NA	False	NA	NA	False	NA	NA	NA	89257251	89245845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89246174_89246318_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.70	chr3	-	2970	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	40.5884657719285	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTCTGCTCCTGG	NA	False	NA	-20	True	AATAAA	-11	NA	89257251	89246955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.71	chr3	-	3222	24	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	6	-1	intron_retention	FALSE	canonical	3	11	junction_5	48.8017090406986	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTCTGCTCCTGG	NA	False	NA	-20	True	AATAAA	-11	NA	89257275	89246955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247481_89247707_89247780_89248019_89248084_89248169_89248245_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.72	chr3	-	4580	21	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_4	42.0098500354381	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATGTGTCTGCTCCTGG	NA	False	NA	-20	True	AATAAA	-11	NA	89257309	89246955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248814_89248885_89249243_89249383_89249595_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.73	chr3	-	3429	21	NIC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	0	-3	intron_retention	FALSE	canonical	3	59	junction_2	28.4963155513129	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAATGTGTCTGCTCCT	NA	False	NA	-22	True	AATAAA	-9	NA	89257289	89246957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89247261_89247361_89247487_89247707_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.75	chr3	-	2766	16	ISM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	-4	2818	-4	274	5prime_fragment	FALSE	canonical	3	112	junction_2	15.8697476000373	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAGCAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	89257307	89249764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.76	chr3	-	1055	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-19	-2	3	2	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGTTTTGATTTGCTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	89257286	89253832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.77	chr3	-	960	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	-45	119	-9	-119	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGCCTGGAACACTG	NA	False	NA	NA	False	NA	NA	NA	89257312	89253953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.8	chr3	-	4229	24	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.27596415707	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACAGCCTTGGTAAAGT	NA	False	NA	NA	False	NA	NA	NA	89257303	89245845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89246174_89246318_89247261_89247361_89247481_89247707_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21906.9	chr3	-	3905	24	NNC	ENSMUSG00000028041.18	novel	3914	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.0315015687092	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGACAGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	89257288	89245850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89246174_89246318_89247261_89247361_89247481_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ES.21907.1	chr3	-	170	1	Intergenic	novelGene_18112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	1856	False	NA	NA	False	NA	NA	NA	89279322	89279152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89279200_89279300
ES.21908.1	chr3	-	3456	2	ISM	ENSMUSG00000028042.16	ENSMUST00000107433.8	3650	3	6503	-762	6503	762	3prime_fragment	FALSE	canonical	3	40	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	89287993	89284188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89287302_89287650
ES.21908.10	chr3	-	3859	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	5102	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89289394	89284953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89288823_89289055
ES.21908.12	chr3	-	2872	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89301008	89284955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89287884_89300715
ES.21908.14	chr3	-	3656	3	FSM	ENSMUSG00000028042.16	ENSMUST00000107432.8	3639	3	-22	5	-22	-5	multi-exon	FALSE	canonical	3	5	junction_2	17.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTGTCCACTTTT	NA	False	NA	-14	True	AAGAAA	-18	NA	89299398	89284955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89287302_89287650_89288823_89299260
ES.21908.15	chr3	-	2294	3	FSM	ENSMUSG00000028042.16	ENSMUST00000029677.9	3851	3	45	1512	25	-1512	multi-exon	FALSE	canonical	3	27	junction_2	6.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAATAATCTATCTCTGA	NA	False	NA	NA	False	NA	NA	NA	89300624	89286462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89287302_89287650_89288823_89300341
ES.21908.16	chr3	-	2007	4	NNC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	-16	-1645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6599986661331	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTATATATATATG	NA	False	NA	NA	False	NA	NA	NA	89301001	89286595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300973
ES.21908.17	chr3	-	2156	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	-20	-1647	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTGTGTATATATATA	NA	False	NA	NA	False	NA	NA	NA	89300962	89286597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
ES.21908.4	chr3	-	3839	4	NIC	ENSMUSG00000028042.16	novel	3851	3	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	12.2836838484589	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTCCACTTTTGGT	NA	False	NA	-11	True	AAGAAA	-21	NA	89301000	89284952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89287302_89287650_89288823_89300341_89300443_89300783
ES.21908.6	chr3	-	2364	1	NIC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	7179	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89287317	89284953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89285000_89287300
ES.21908.7	chr3	-	3552	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	4896	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89289600	89284953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89288823_89289568
ES.21908.8	chr3	-	3647	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	-196	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89299572	89284953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89288823_89299445
ES.21908.9	chr3	-	3686	3	NNC	ENSMUSG00000028042.16	novel	3650	3	NA	NA	-423	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTCCACTTTTGG	NA	False	NA	-12	True	AAGAAA	-20	NA	89299799	89284953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89287302_89287650_89288823_89299633
ES.21909.1	chr3	-	4225	8	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	-33	465	intron_retention	FALSE	canonical	0	0	junction_4	119.592676043583	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATAGTTCAGCAGTGGG	3793	False	NA	NA	False	AAAACA	-10	NA	89319121	89307845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313213_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.10	chr3	-	4345	7	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	214	junction_6	47.005909793935	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGGGAATGAGGGCATG	3742	False	NA	-4	True	AATAAA	-31	NA	89319172	89309279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.12	chr3	-	3749	7	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	2	-6	intron_retention	FALSE	canonical	3	214	junction_6	48.3241370561568	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGGGGAATGAGGGCA	3746	False	NA	-6	True	AATAAA	-29	NA	89319168	89309281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89316474_89318464_89318688_89319090
ES.21909.13	chr3	-	4422	5	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	2887	-6	intron_retention	FALSE	canonical	3	278	junction_3	28.5252081499855	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGGGGAATGAGGGCA	6713	False	NA	-6	True	AATAAA	-29	NA	89316201	89309281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89313078_89313161_89313261_89314715_89314864_89315728
ES.21909.14	chr3	-	2554	6	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	1	-10	intron_retention	FALSE	canonical	1	1	junction_5	167.043706855422	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTCAAAGGGGAATGAG	3739	False	NA	-10	True	AATAAA	-25	NA	89319175	89309285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89315728_89316474_89319052
ES.21909.15	chr3	-	2845	8	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	3	-10	intron_retention	FALSE	canonical	3	35	junction_7	105.155666921542	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTCAAAGGGGAATGAG	3747	False	NA	-10	True	AATAAA	-25	NA	89319167	89309285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
ES.21909.16	chr3	-	3735	7	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	-17	-12	intron_retention	FALSE	canonical	3	35	junction_6	111.506975367264	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATTCAAAGGGGAATG	3720	False	NA	-12	True	AATAAA	-23	NA	89319194	89309287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89316474_89318464_89318688_89319124
ES.21909.17	chr3	-	2843	8	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	-2	-20	intron_retention	FALSE	canonical	3	21	junction_4	112.779720278614	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCTGAACATTCAAA	3742	False	NA	-20	True	AATAAA	-15	NA	89319172	89309295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.18	chr3	-	1788	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-7	1111	0	-413	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGCCTGTTGCTCTGG	3737	False	NA	-13	True	AGTAAA	-20	NA	89319177	89310386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.2	chr3	-	4311	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	50	-2123	-38	460	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGGGATATAGTTCAGCA	3788	False	NA	NA	False	AAAACA	-5	NA	89319126	89307850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ES.21909.20	chr3	-	1813	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	10	415	4	-415	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3748	False	NA	-15	True	AGTAAA	-18	NA	89319166	89310388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ES.21909.21	chr3	-	1783	8	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	2	-416	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	136.889349028882	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3746	False	NA	-16	True	AGTAAA	-17	NA	89319168	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ES.21909.22	chr3	-	2885	5	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	16	-416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	167.075581698823	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3760	False	NA	-16	True	AGTAAA	-17	NA	89319154	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89312007_89315621_89316474_89318464_89318688_89318867
ES.21909.23	chr3	-	1778	8	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	2	-416	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	141.808148638956	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3740	False	NA	-16	True	AGTAAA	-17	NA	89319174	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314894_89315728_89316474_89318464_89318688_89319124
ES.21909.24	chr3	-	2747	6	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	3	-416	intron_retention	FALSE	canonical	0	0	junction_5	162.771742019308	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3747	False	NA	-16	True	AGTAAA	-17	NA	89319167	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89316474_89318729
ES.21909.25	chr3	-	1919	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	0	-416	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	114.072300739129	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3826	False	NA	-16	True	AGTAAA	-17	NA	89319088	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89318867
ES.21909.26	chr3	-	1551	7	NIC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	4	-416	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	122.343437366565	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3748	False	NA	-16	True	AGTAAA	-17	NA	89319166	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89319090
ES.21909.27	chr3	-	1741	8	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	-7	-416	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	142.325582481054	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3730	False	NA	-16	True	AGTAAA	-17	NA	89319184	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89314844_89315728_89316474_89318464_89318688_89319090
ES.21909.28	chr3	-	1791	8	NIC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	-40	-416	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGGTGCCTGTTGCTC	3697	False	NA	-16	True	AGTAAA	-17	NA	89319217	89310389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
ES.21909.3	chr3	-	4058	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-2	-1164	-2	199	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGCCACTCTTTAGC	3742	False	NA	NA	False	AATAAA	-16	NA	89319172	89308111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.30	chr3	-	1653	8	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	36	-418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.592676043583	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTGGTGCCTGTTGC	3780	False	NA	-18	True	AGTAAA	-15	NA	89319134	89310391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314802_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.31	chr3	-	329	3	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	6149	-418	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	171	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTGGTGCCTGTTGC	9975	False	NA	-18	True	AGTAAA	-15	NA	89312939	89310391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310763_89312887
ES.21909.32	chr3	-	1890	7	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	23	-419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	124.538815903584	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTTGGTGCCTGTTG	3767	False	NA	-19	True	AGTAAA	-14	NA	89319147	89310392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318729
ES.21909.4	chr3	-	3886	4	ISM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	4883	-1163	4801	198	3prime_fragment	FALSE	canonical	3	334	junction_2	6.23609564462324	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGGCCACTCTTTAG	8627	False	NA	NA	False	AATAAA	-15	NA	89314287	89308112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161
ES.21909.5	chr3	-	3088	8	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	2	6	intron_retention	FALSE	canonical	2	9	junction_7	146.588692940346	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCATGTGTGCTTGGA	3746	False	NA	6	True	AATAAA	-41	NA	89319168	89309269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89314864_89315728_89316474_89318464_89318688_89318867
ES.21909.6	chr3	-	2913	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-24	3	-17	-3	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATGAGGGCATGT	3720	False	NA	-3	True	AATAAA	-32	NA	89319194	89309278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ES.21909.7	chr3	-	2861	8	NNC	ENSMUSG00000042642.14	novel	2238	8	NA	NA	35	-3	intron_retention	FALSE	canonical	3	21	junction_4	136.889349028882	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATGAGGGCATGT	3779	False	NA	-3	True	AATAAA	-32	NA	89319135	89309278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ES.21909.8	chr3	-	4093	6	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	873	-3	intron_retention	FALSE	canonical	3	4	junction_5	134.808901783228	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATGAGGGCATGT	4699	False	NA	-3	True	AATAAA	-32	NA	89318215	89309278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89314864_89315728_89316474_89318163
ES.21909.9	chr3	-	3706	7	NNC	ENSMUSG00000042642.14	novel	2892	8	NA	NA	17	-3	intron_retention	FALSE	canonical	3	21	junction_4	118.894093863217	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGAATGAGGGCATGT	3761	False	NA	-3	True	AATAAA	-32	NA	89319153	89309278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313230_89314715_89316474_89318464_89318688_89319090
ES.2191.1	chr1	+	656	2	NIC	ENSMUSG00000026630.10	novel	801	3	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTCCTTTGTCCATC	NA	False	NA	NA	False	AATAAA	-11	NA	190830560	190841139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_190830725_190840647
ES.2191.2	chr1	+	748	3	FSM	ENSMUSG00000026630.10	ENSMUST00000027943.6	801	3	53	0	-5	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCCTTTGTCCATCT	NA	False	NA	NA	False	AATAAA	-12	NA	190830574	190841140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190830725_190832924_190833030_190840647
ES.21910.1	chr3	-	1051	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	107	-309	-57	309	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTATTGTCGTTTA	NA	False	NA	NA	False	NA	NA	NA	89325583	89322469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89323271_89323580_89323709_89325461
ES.21910.2	chr3	-	875	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	-28	2	-28	-2	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTGTGGTTATAAGACT	NA	False	NA	-14	True	ATTAAA	-20	NA	89325718	89322780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89323271_89323580_89323709_89325461
ES.21910.3	chr3	-	778	3	NNC	ENSMUSG00000028044.7	novel	849	3	NA	NA	-76	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTGTGGTTATAAGACT	NA	False	NA	-14	True	ATTAAA	-20	NA	89325602	89322780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89323290_89323580_89323709_89325461
ES.21910.5	chr3	-	858	3	FSM	ENSMUSG00000028044.7	ENSMUST00000107422.2	766	3	-9	-83	-9	-2	multi-exon	FALSE	canonical	3	67	junction_2	1287.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTGTGGTTATAAGACT	NA	False	NA	-14	True	ATTAAA	-20	NA	89325333	89322780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89323271_89323580_89323709_89325093
ES.21910.7	chr3	-	779	3	FSM	ENSMUSG00000028044.7	ENSMUST00000183484.2	359	3	-56	-364	-56	-8	multi-exon	FALSE	canonical	0	0	junction_2	1321	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTAACGCTGTGGTTAT	NA	False	NA	-20	True	ATTAAA	-14	NA	89325582	89322786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89323271_89323580_89323709_89325415
ES.21911.1	chr3	-	2618	1	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAATACAAGAAATAAAAG	9878	False	NA	NA	False	NA	NA	NA	89330284	89327666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89327700_89330300
ES.21911.2	chr3	-	3602	12	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	6193	False	NA	NA	False	NA	NA	NA	89336147	89327693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89329651_89330230_89330300_89330810_89330877_89331001_89331121_89331493_89331550_89331860_89331912_89332070_89332197_89333818_89334006_89334088_89334163_89334243_89334378_89334514_89334753_89335622
ES.21911.3	chr3	-	2464	1	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTGGGTGTGGTGGTGC	9878	False	NA	NA	False	AATAAA	-37	NA	89330284	89327820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89327800_89330300
ES.21912.1	chr3	+	2913	9	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-1	-1975	intron_retention	FALSE	canonical	3	13	junction_2	25.0499500997507	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCCATAGTTGG	4367	False	NA	NA	False	NA	NA	NA	89344011	89356284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.10	chr3	+	2664	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	12	-1974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3137611759929	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGCCATAGTTGGC	4389	False	NA	NA	False	NA	NA	NA	89344033	89356285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.11	chr3	+	4835	9	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	13	-9	intron_retention	FALSE	canonical	3	58	junction_1	11.9687092035858	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTAGCCTGGTTCT	4390	False	NA	26	True	AATAAA	-15	NA	89344034	89358250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.12	chr3	+	3780	9	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	14	-9	intron_retention	FALSE	canonical	1	1	junction_7	28.2021164985893	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTAGCCTGGTTCT	4391	False	NA	26	True	AATAAA	-15	NA	89344035	89358250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89355406_89355573_89355979
ES.21912.15	chr3	+	2607	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-18	-1848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGAGCTGTCATTTTTT	4398	False	NA	NA	False	NA	NA	NA	89344042	89356411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.16	chr3	+	4506	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3137611759929	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTAGCCTGGTTCTTCTC	4399	False	NA	30	True	AATAAA	-19	NA	89344043	89358254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.18	chr3	+	2444	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-7	-1988	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.4145135932695	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4409	False	NA	NA	False	NA	NA	NA	89344053	89356271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.19	chr3	+	4451	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.5600211476844	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTCCTCTAGCCTGGT	4411	False	NA	23	True	AATAAA	-12	NA	89344055	89358247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353502_89353586_89353719_89354352_89355573_89355979
ES.21912.2	chr3	+	4500	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.9256551253289	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTAGCCTGGTTCTTCTC	4369	False	NA	30	True	AATAAA	-19	NA	89344013	89358254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.20	chr3	+	3067	9	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-3	-2007	intron_retention	FALSE	non_canonical	0	0	junction_6	28.5032892838704	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	4413	False	NA	NA	False	NA	NA	NA	89344057	89356252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89355573_89355979
ES.21912.21	chr3	+	5099	8	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	-2	-2009	intron_retention	FALSE	non_canonical	0	0	junction_4	37.1318665057937	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCTAAAAAAAAAAAAAAAAA	4414	False	NA	NA	False	NA	NA	NA	89344058	89356250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89355406_89355573_89355979
ES.21912.22	chr3	+	3869	7	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-1988	intron_retention	FALSE	canonical	3	58	junction_1	11.9361728465293	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4418	False	NA	NA	False	NA	NA	NA	89344062	89356271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586
ES.21912.23	chr3	+	2925	6	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	2	2186	intron_retention	FALSE	canonical	3	58	junction_1	11.6687617166519	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTCTTCATTTCTG	4420	False	NA	NA	False	AATGAA	-16	NA	89344064	89355654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344088_89346823_89346909_89350428_89350824_89350902_89351063_89352758_89353719_89354352
ES.21912.24	chr3	+	4634	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.0814281301408	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTCTAGCCTGGTTC	4424	False	NA	25	True	AATAAA	-14	NA	89344068	89358249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350716_89350824_89350902_89351063_89352758_89353016_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.25	chr3	+	2900	10	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	6	-1972	intron_retention	FALSE	canonical	0	0	junction_1	27.1174855894008	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCCATAGTTGGCGC	4424	False	NA	NA	False	NA	NA	NA	89344068	89356287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.26	chr3	+	4499	10	NNC	ENSMUSG00000042613.10	novel	699	6	NA	NA	101	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3137611759929	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTAGCCTGGTTCT	4519	False	NA	26	True	AATAAA	-15	NA	89344163	89358250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.28	chr3	+	4402	9	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	2758	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	28.6868872483579	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTCTAGCCTGGTT	7176	False	NA	24	True	AATAAA	-13	NA	89346820	89358248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.29	chr3	+	5310	5	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	6060	-11	intron_retention	FALSE	canonical	3	72	junction_2	7.79021822544144	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTCTAGCCTGGTT	NA	False	NA	24	True	AATAAA	-13	NA	89350122	89358248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89350824_89350902_89351063_89352758_89353719_89354352_89355573_89355979
ES.21912.3	chr3	+	4478	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTAGCCTGGTTCTTCT	4369	False	NA	29	True	AATAAA	-18	NA	89344013	89358253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.30	chr3	+	1821	5	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	6948	2180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5061614371365	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGAGTCTCTCTCTTCA	NA	False	NA	NA	False	AATGAA	-10	NA	89351010	89355648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352
ES.21912.31	chr3	+	4398	1	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	7824	-1975	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCCATAGTTGG	NA	False	NA	NA	False	NA	NA	NA	89351886	89356284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89351900_89356300
ES.21912.4	chr3	+	4462	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.4145135932695	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTCTAGCCTGGTTC	4369	False	NA	25	True	AATAAA	-14	NA	89344013	89358249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.5	chr3	+	2890	9	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-1975	intron_retention	FALSE	canonical	3	58	junction_1	11.9687092035858	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGGCCATAGTTGG	4369	False	NA	NA	False	NA	NA	NA	89344013	89356284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.6	chr3	+	2538	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-1967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.9256551253289	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATAGTTGGCGCTGCTG	4369	False	NA	NA	False	NA	NA	NA	89344013	89356292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.7	chr3	+	2517	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	1	-1967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATAGTTGGCGCTGCTG	4369	False	NA	NA	False	NA	NA	NA	89344013	89356292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21912.9	chr3	+	4002	10	NNC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	11	-463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.4145135932695	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCAGGTAGTGAGGCCC	4388	False	NA	NA	False	NA	NA	NA	89344032	89357796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353017_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ES.21913.1	chr3	-	174	1	Intergenic	novelGene_18114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATCCTGT	4691	False	NA	NA	False	NA	NA	NA	89345293	89345119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89345100_89345300
ES.21914.1	chr3	+	1063	5	NNC	ENSMUSG00000027952.17	novel	978	4	NA	NA	-2116	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	244.099749078118	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGCTGGAGACTGA	NA	False	NA	16	True	AATAAA	-15	NA	89364308	89376315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89364530_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ES.21914.10	chr3	+	4334	8	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	-94	26518	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	287.27878801056	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTGGCTGTGTTGT	259	False	NA	NA	False	NA	NA	NA	89366543	89402838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820_89375972_89398000_89398206_89398383_89401024_89402075
ES.21914.11	chr3	+	1272	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	-24	26522	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	236.773098134057	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGTTGTCTCT	329	False	NA	NA	False	NA	NA	NA	89366613	89402842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402075
ES.21914.12	chr3	+	991	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.03076741032	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGCTGGAGACTGA	377	False	NA	16	True	AATAAA	-15	NA	89366661	89376315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366811_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ES.21914.13	chr3	+	4788	3	NNC	ENSMUSG00000027952.17	novel	1156	5	NA	NA	4257	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCAGAGCTGGAGACT	3515	False	NA	14	True	AATAAA	-13	NA	89371134	89376313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89373414_89373594_89373672_89373881
ES.21914.14	chr3	+	180	1	Intergenic	novelGene_18116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6054	False	NA	NA	False	NA	NA	NA	89373673	89373853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89373700_89373900
ES.21914.15	chr3	+	730	3	NNC	ENSMUSG00000027952.17	novel	978	4	NA	NA	7416	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	320	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGCTGGAGACTGA	6674	False	NA	16	True	AATAAA	-15	NA	89374293	89376315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89374399_89374853_89374984_89375820
ES.21914.16	chr3	+	193	1	Intergenic	novelGene_18118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAAAGGCGT	963	False	NA	NA	False	NA	NA	NA	89390294	89390487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89390300_89390500
ES.21914.2	chr3	+	1016	6	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	-1929	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.3061245465	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGCTGGAGACTGA	NA	False	NA	16	True	AATAAA	-15	NA	89364495	89376315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89364530_89366631_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ES.21914.3	chr3	+	1168	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	28	-2	28	2	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAGACTGATGATTTC	168	False	NA	23	True	AATAAA	-22	NA	89366452	89376322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ES.21914.4	chr3	+	3579	4	NIC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	29	1	intron_retention	FALSE	canonical	3	568	junction_1	30.8688984074406	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCTGGAGACTGATG	169	False	NA	18	True	AATAAA	-17	NA	89366453	89376317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89369253_89371602_89371756_89374853_89374984_89375820
ES.21914.5	chr3	+	5916	3	ISM	ENSMUSG00000027952.17	ENSMUST00000198440.5	978	4	4616	2	39	1	3prime_fragment	FALSE	canonical	3	584	junction_1	28	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCAGAGCTGGAGACTG	179	False	NA	15	True	AATAAA	-14	NA	89366463	89376314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89371756_89374853_89374984_89375820
ES.21914.6	chr3	+	1077	6	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	75	26522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	270.569325681977	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGTTGTCTCT	215	False	NA	NA	False	NA	NA	NA	89366499	89402842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402075_89402226_89402534
ES.21914.7	chr3	+	3836	9	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	81	26522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	268.383470988807	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGTTGTCTCT	221	False	NA	NA	False	NA	NA	NA	89366505	89402842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89398000_89398210_89398383_89398488_89398579_89398674_89398974_89401024_89402075
ES.21914.8	chr3	+	887	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	-102	26518	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTGGCTGTGTTGT	251	False	NA	NA	False	NA	NA	NA	89366535	89402838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
ES.21914.9	chr3	+	899	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	116	179	-97	-170	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGACACTCTGCCTCTT	256	False	NA	NA	False	AATAAA	-28	NA	89366540	89376141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ES.21915.1	chr3	-	2443	1	Intergenic	novelGene_18115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89365531	89363088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89363100_89365500
ES.21916.1	chr3	-	3559	2	Antisense	novelGene_ENSMUSG00000027952.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	9879	False	NA	NA	False	NA	NA	NA	89378012	89370651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89372590_89376391
ES.21916.2	chr3	-	176	1	Intergenic	novelGene_18117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTAAGGTATATAAC	9959	False	NA	NA	False	NA	NA	NA	89377932	89377756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89377800_89377900
ES.21917.1	chr3	+	159	1	Intergenic	novelGene_18119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	9373	False	NA	NA	False	NA	NA	NA	89405088	89405247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89405100_89405200
ES.21918.1	chr3	-	4238	4	Antisense	novelGene_ENSMUSG00000000794.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTCCCTTTCTTAAATTG	NA	False	NA	NA	False	AATAAA	-24	NA	89586736	89573970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89574143_89574242_89574446_89579500_89579711_89583083
ES.21918.2	chr3	-	484	3	Antisense	novelGene_ENSMUSG00000000794.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAACACGTCCCT	NA	False	NA	NA	False	AATAAA	-13	NA	89586729	89573981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89574143_89574242_89574446_89586609
ES.21919.1	chr3	+	177	1	Intergenic	novelGene_18120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTTAATAATGAT	NA	False	NA	NA	False	NA	NA	NA	89602307	89602484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89602300_89602500
ES.2192.1	chr1	-	5323	2	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTCTTGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	190881789	190874574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_190878912_190880803
ES.21920.1	chr3	+	5848	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	-4	13	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATATCTTGGTTCTTG	NA	False	NA	25	True	AATAAA	-29	NA	89622324	89660766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.10	chr3	+	5558	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	5	intron_retention	FALSE	canonical	3	79	junction_6	19.96298349594	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCACAGACAGTTCT	NA	False	NA	25	True	ATTAAA	-25	NA	89622360	89658718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.11	chr3	+	5648	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	36.1138895406114	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89622360	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.12	chr3	+	3507	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	-252	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGTACCCAATGACTG	NA	False	NA	NA	False	NA	NA	NA	89622360	89658461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.13	chr3	+	4358	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	38	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.832043833782	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89622366	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.14	chr3	+	5666	15	NNC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	35.0340941812692	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622381	89660753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89622458_89642148_89643391_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.16	chr3	+	3688	16	NNC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	61	-3	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_2	33.4573692264582	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCATATGTAGCACAG	NA	False	NA	17	True	ATTAAA	-17	NA	89622389	89658710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89622458_89642148_89643314_89643430_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.17	chr3	+	5702	16	NNC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	33.4573692264582	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622418	89660753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89622458_89642148_89643314_89643430_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.18	chr3	+	3803	15	NIC	ENSMUSG00000027951.17	novel	481	3	NA	NA	141	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	35.5419413065288	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCATATGTAGCACAG	NA	False	NA	17	True	ATTAAA	-17	NA	89622779	89658710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622846_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.19	chr3	+	3079	1	Intergenic	novelGene_18121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAAATCACACCAACTTA	NA	False	NA	NA	False	NA	NA	NA	89624444	89627523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89624400_89627500
ES.21920.2	chr3	+	5923	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	-1	-13	-1	13	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATATCTTGGTTCTTG	NA	False	NA	25	True	AATAAA	-29	NA	89622327	89660766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.20	chr3	+	5843	15	FSM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	-53	-2037	-53	-3	multi-exon	FALSE	canonical	3	12	junction_1	36.4602803173032	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89638001	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.21	chr3	+	3757	15	FSM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	-1	-3	-1	3	multi-exon	FALSE	canonical	3	12	junction_1	36.4602803173032	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGCACAGACAGTT	NA	False	NA	23	True	ATTAAA	-23	NA	89638053	89658716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.22	chr3	+	4034	15	FSM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	8	-289	8	289	multi-exon	FALSE	canonical	3	12	junction_1	36.4602803173032	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAGGGCAGGAGTTGA	NA	False	NA	NA	False	CATAAA	-15	NA	89638062	89659002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.23	chr3	+	5658	15	NNC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	42.8476775261828	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89638074	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89638146_89642148_89643391_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.24	chr3	+	3812	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	22	2037	22	3	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTAGCACAGACAGTT	NA	False	NA	23	True	ATTAAA	-23	NA	89638076	89658716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.25	chr3	+	4089	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	33	1749	33	291	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGGGCAGGAGTTGACA	NA	False	NA	NA	False	CATAAA	-17	NA	89638087	89659004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.26	chr3	+	4807	12	NIC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	185	-3	intron_retention	FALSE	canonical	3	79	junction_5	19.0610155566168	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89645077	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.27	chr3	+	4447	13	ISM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	7072	-2047	234	7	3prime_fragment	FALSE	canonical	3	43	junction_5	26.4858452762981	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTTTTATATCTTGG	NA	False	NA	19	True	AATAAA	-23	NA	89645126	89660760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.28	chr3	+	3725	9	ISM	ENSMUSG00000027951.17	ENSMUST00000118341.6	2399	14	12553	1	-2344	-1	3prime_fragment	FALSE	canonical	3	79	junction_1	20.795131641805	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCATATGTAGCACAGAC	NA	False	NA	19	True	ATTAAA	-19	NA	89650607	89658712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.29	chr3	+	5843	8	NIC	ENSMUSG00000027951.17	novel	2321	14	NA	NA	-2257	-1	intron_retention	FALSE	canonical	3	43	junction_1	32.7576132294433	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTACAAAGTTTTA	NA	False	NA	11	True	AATAAA	-15	NA	89650694	89660752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89652831_89653126_89653299_89653871_89653966_89654478_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.3	chr3	+	3861	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	9	2039	9	1	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATGTAGCACAGACAG	NA	False	NA	21	True	ATTAAA	-21	NA	89622337	89658714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.30	chr3	+	5487	9	ISM	ENSMUSG00000027951.17	ENSMUST00000029563.14	3753	15	12730	-2016	-2167	-24	3prime_fragment	FALSE	canonical	3	43	junction_1	31.3279028982152	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAACACTGAAGC	NA	False	NA	-12	True	NA	NA	NA	89650784	89660729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.31	chr3	+	4243	8	NIC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	-311	-3	intron_retention	FALSE	canonical	3	79	junction_1	22.1792327943718	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89652640	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89652909_89653126_89653299_89653871_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.32	chr3	+	4041	6	NIC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	448	-3	intron_retention	FALSE	canonical	3	117	junction_4	7.17216843081644	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTGTTACAAAGTTT	NA	False	NA	9	True	AATAAA	-13	NA	89653399	89660750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89658063_89658235
ES.21920.33	chr3	+	3381	4	NIC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	1866	-1	intron_retention	FALSE	canonical	3	117	junction_2	7.93025150224688	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTACAAAGTTTTA	NA	False	NA	11	True	AATAAA	-15	NA	89654817	89660752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89654979_89656943_89657127_89657542_89658063_89658235
ES.21920.34	chr3	+	3064	2	NIC	ENSMUSG00000027951.17	novel	5871	15	NA	NA	4564	-1	intron_retention	FALSE	canonical	3	136	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTACAAAGTTTTA	NA	False	NA	11	True	AATAAA	-15	NA	89657515	89660752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89658063_89658235
ES.21920.4	chr3	+	3784	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCACAGACAGTTCT	NA	False	NA	25	True	ATTAAA	-25	NA	89622340	89658718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.5	chr3	+	5707	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	35.8811318286056	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGTTACAAAGTTTTA	NA	False	NA	11	True	AATAAA	-15	NA	89622346	89660752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89657542_89657656_89657934_89658063_89658235
ES.21920.6	chr3	+	4177	14	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	31	-191	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.832043833782	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCTTGAAACTATTTCC	NA	False	NA	NA	False	NA	NA	NA	89622359	89660562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89622458_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.7	chr3	+	3586	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	32	2291	32	-251	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTACCCAATGACTGA	NA	False	NA	NA	False	NA	NA	NA	89622360	89658462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21920.8	chr3	+	6078	15	NNC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	32	-5	intron_retention	TRUE	canonical	0	0	junction_11	44.3727830719577	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTCCATATGTAGCAC	NA	False	NA	15	True	ATTAAA	-15	NA	89622360	89658708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89655827_89655884_89656055_89656131_89657656_89657934_89658063_89658235
ES.21920.9	chr3	+	4137	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	32	1740	32	300	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTGACAACCGTGGTC	NA	False	NA	NA	False	CATAAA	-26	NA	89622360	89659013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ES.21921.1	chr3	-	5180	6	FSM	ENSMUSG00000027950.8	ENSMUST00000029562.5	6399	6	205	1014	181	-1014	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTTCAGTGTTTTTAT	NA	False	NA	NA	False	TATAAA	-16	NA	89671734	89660753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89664578_89667978_89668949_89669705_89669816_89670316_89670362_89670526_89670673_89671649
ES.21922.1	chr3	+	1430	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-836	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	300.584846590775	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680086	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89680121_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.10	chr3	+	2216	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-67	-2	intron_retention	FALSE	canonical	3	944	junction_1	74.5925571808398	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680855	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.11	chr3	+	3017	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-64	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	311.455261900147	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTCTAATAAACTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	89680858	89691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89689077_89689145_89689563
ES.21922.12	chr3	+	1852	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	298.589496633756	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680873	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686861_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.13	chr3	+	1859	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	298.228752619342	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680873	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683827_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.14	chr3	+	3906	12	NIC	ENSMUSG00000042572.13	novel	1650	13	NA	NA	-47	0	intron_retention	FALSE	canonical	3	945	junction_11	73.1353324973923	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	23	True	AAAACA	-22	NA	89680875	89690051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.15	chr3	+	3191	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-47	-32	intron_retention	FALSE	canonical	3	944	junction_1	79.9798528349742	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTGGCTCTAATAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	89680875	89691275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.16	chr3	+	3900	10	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-33	0	intron_retention	FALSE	canonical	3	944	junction_1	80.7145557267885	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTTCATGTCCACTT	NA	False	NA	NA	False	AATAAA	-43	NA	89680889	89691307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688771_89689077
ES.21922.17	chr3	+	1785	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.644435153703	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680896	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683878_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.18	chr3	+	3442	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-26	-30	intron_retention	FALSE	non_canonical	0	0	junction_1	300.591765892252	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGCTCTAATAAACTTA	NA	False	NA	NA	False	AATAAA	-13	NA	89680896	89691277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681056_89681105_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077
ES.21922.19	chr3	+	2263	12	ISM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-25	1258	-25	-2	intron_retention	FALSE	canonical	3	944	junction_1	73.2757725512001	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680897	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077
ES.21922.2	chr3	+	2151	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-325	1251	-325	5	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGACTCATCTTTAT	NA	False	NA	28	True	AAAACA	-27	NA	89680597	89690056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.20	chr3	+	4206	11	NIC	ENSMUSG00000042572.13	novel	1650	13	NA	NA	-17	0	intron_retention	FALSE	canonical	3	945	junction_10	68.7378352874165	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	23	True	AAAACA	-22	NA	89680905	89690051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.21	chr3	+	1776	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	312.529958894522	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680906	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.22	chr3	+	1823	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	300.118726506694	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680912	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689083_89689145_89689563
ES.21922.23	chr3	+	1938	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	944	junction_1	76.1795399963113	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGGTCTTGACTCAT	NA	False	NA	22	True	AAAACA	-21	NA	89680915	89690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.24	chr3	+	1945	15	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-7	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	476.901377089003	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTACAGTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	89680915	89690024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89682544_89682656_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688519_89688553_89688674_89688771_89689077_89689145_89689563
ES.21922.25	chr3	+	2928	14	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-6	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.872507248071	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTCTAATAAACTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	89680916	89691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89680973_89681099_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.26	chr3	+	5446	11	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	945	junction_10	68.7378352874165	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCATGGGTTCATGTC	NA	False	NA	NA	False	AATAAA	-38	NA	89680916	89691302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.27	chr3	+	3473	12	ISM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-6	29	-6	-29	intron_retention	FALSE	canonical	3	944	junction_1	73.2757725512001	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTCTAATAAACTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	89680916	89691278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077
ES.21922.28	chr3	+	3166	14	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-6	-28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	382.507810184408	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTCTAATAAACTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	89680916	89691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89682544_89682656_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.29	chr3	+	1874	12	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	310.417740397869	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680917	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688354_89688674_89688771_89689077_89689145_89689563
ES.21922.3	chr3	+	3328	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	-251	0	-251	0	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTTCATGTCCACTT	NA	False	NA	NA	False	AATAAA	-43	NA	89680671	89691307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.31	chr3	+	4147	10	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	945	junction_9	77.8117386174263	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	23	True	AAAACA	-22	NA	89680922	89690051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89688085_89688195_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.32	chr3	+	6382	9	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	0	-32	intron_retention	FALSE	canonical	3	14	junction_1	454.304808883859	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTGGCTCTAATAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	89680922	89691275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89682544_89682656_89683383_89683489_89683818_89683924_89684537_89686877_89687061_89687805_89687993_89688771_89689077_89689145_89689563
ES.21922.33	chr3	+	4042	11	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	945	junction_10	73.9557300011297	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680926	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.34	chr3	+	3020	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	14	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	298.589496633756	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCTAATAAACTTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	89680936	89691280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686861_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.35	chr3	+	2957	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	25	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.644435153703	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTTTGGCTCTAATAA	NA	False	NA	NA	False	AATAAA	-8	NA	89680947	89691272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683878_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.36	chr3	+	3568	12	ISM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	1540	7	868	-7	3prime_fragment	FALSE	canonical	3	945	junction_11	73.1353324973923	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACCATGGGTTCATG	NA	False	NA	NA	False	AATAAA	-36	NA	89682462	89691300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.37	chr3	+	3187	11	ISM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	2344	3	1672	-3	intron_retention	FALSE	canonical	3	955	junction_1	66.9932086110226	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGGTTCATGTCCA	NA	False	NA	NA	False	AATAAA	-40	NA	89683266	89691304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077
ES.21922.38	chr3	+	2803	8	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	5177	-35	intron_retention	FALSE	canonical	1	3	junction_6	377.585076235699	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTTTGGCTCTAATAA	NA	False	NA	NA	False	AATAAA	-8	NA	89686771	89691272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688612_89688771_89689077
ES.21922.39	chr3	+	2003	4	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	6635	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	466.273405727679	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTCTAATAAACTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	89688229	89691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89688354_89688674_89688771_89689077_89689145_89689563
ES.21922.4	chr3	+	1306	12	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-208	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.917423473643	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGCTGGTCTTGACT	NA	False	NA	19	True	AAAACA	-18	NA	89680714	89690047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89680792_89683878_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.5	chr3	+	3086	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-83	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	313.415337138627	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACCATGGGTTCATG	NA	False	NA	NA	False	AATAAA	-36	NA	89680839	89691300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689563
ES.21922.6	chr3	+	1891	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-74	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	299.118554627128	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTGGTCTTGACTCA	NA	False	NA	21	True	AAAACA	-20	NA	89680848	89690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684594_89686742_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.7	chr3	+	5756	11	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-74	-30	intron_retention	FALSE	canonical	3	945	junction_10	69.576504654948	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGCTCTAATAAACTTA	NA	False	NA	NA	False	AATAAA	-13	NA	89680848	89691277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.8	chr3	+	3331	11	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-72	-28	intron_retention	FALSE	canonical	3	944	junction_1	79.8338274167035	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTCTAATAAACTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	89680850	89691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688403_89688674_89688771_89689077_89689145_89689563
ES.21922.9	chr3	+	2042	13	NNC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	295.723817757192	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGGTCTTGACTCAT	NA	False	NA	22	True	AAAACA	-21	NA	89680855	89690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688519_89688771_89689077_89689145_89689563
ES.21923.1	chr3	-	5726	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	-449	-606	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTCAGGAGAAAACATT	2638	False	NA	NA	False	AATAAA	-20	NA	89680547	89674821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89674800_89680500
ES.21923.2	chr3	-	2236	2	NNC	ENSMUSG00000042579.3	novel	2791	2	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCTTCAGGAGAAAACA	2616	False	NA	NA	False	AATAAA	-18	NA	89680569	89674823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89676870_89680379
ES.21923.3	chr3	-	3849	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	489	333	489	-333	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACAATAACAAGC	3576	False	NA	NA	False	NA	NA	NA	89679609	89675760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89675800_89679600
ES.21923.4	chr3	-	1856	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	-449	3264	0	-3264	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAACTGCCTTGTTAA	2638	False	NA	NA	False	TATAAA	-13	NA	89680547	89678691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89678700_89680500
ES.21924.1	chr3	+	188	1	Intergenic	novelGene_18122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	89697879	89698067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89697900_89698100
ES.21925.1	chr3	+	254	1	Intergenic	novelGene_18123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	89700901	89701155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89700900_89701200
ES.21926.1	chr3	+	5062	6	NNC	ENSMUSG00000046280.10	novel	5733	6	NA	NA	-13219	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9914268214431	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGCTTTGTTCAGTTA	9743	False	NA	32	True	AATAAA	-20	NA	89725457	89766150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89725512_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.10	chr3	+	287	1	Intergenic	novelGene_18125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAGTAATATAT	NA	False	NA	14	True	AATAAA	-10	NA	89753559	89753846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89753600_89753800
ES.21926.11	chr3	+	5177	4	ISM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	17695	-2	11176	2	3prime_fragment	FALSE	canonical	3	46	junction_2	2.82842712474619	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTCATTTGCTTTGT	NA	False	NA	25	True	AATAAA	-13	NA	89756371	89766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.2	chr3	+	3874	2	NNC	ENSMUSG00000046280.10	novel	5733	6	NA	NA	-11188	-1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTCTGTAAAGGAACT	NA	False	NA	NA	False	NA	NA	NA	89727488	89745239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89727574_89741450
ES.21926.3	chr3	+	5077	6	NNC	ENSMUSG00000046280.10	novel	5733	6	NA	NA	-11174	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9914268214431	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTGCTTTGTTCAGT	NA	False	NA	30	True	AATAAA	-18	NA	89727502	89766148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89727574_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.4	chr3	+	3103	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-720	3350	-720	-3350	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTGTGGTTTTTTT	2159	False	NA	NA	False	NA	NA	NA	89737956	89762791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.5	chr3	+	5956	7	NNC	ENSMUSG00000046280.10	novel	5733	6	NA	NA	-330	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.0844861344913	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTGTTCAGTTAGT	2549	False	NA	34	True	AATAAA	-22	NA	89738346	89766152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837_89764487_89764604
ES.21926.6	chr3	+	5925	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-180	-12	-180	12	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGTTCAGTTAGTT	2699	False	NA	35	True	AATAAA	-23	NA	89738496	89766153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.7	chr3	+	2644	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-146	3235	-146	-3235	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTGGGATCCCATT	2733	False	NA	NA	False	NA	NA	NA	89738530	89762906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.8	chr3	+	2763	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-144	3114	-144	-3114	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTCTCTTCTGCTCTC	2735	False	NA	NA	False	NA	NA	NA	89738532	89763027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ES.21926.9	chr3	+	178	1	Intergenic	novelGene_18124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCATACACATAAG	NA	False	NA	NA	False	NA	NA	NA	89749821	89749999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89749800_89750000
ES.21927.1	chr3	-	1534	1	Antisense	novelGene_ENSMUSG00000046280.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGATTACATATGAAC	NA	False	NA	NA	False	ATTAAA	-5	NA	89739593	89738059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89738100_89739600
ES.21928.1	chr3	+	175	1	Intergenic	novelGene_18126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGCC	9565	False	NA	NA	False	NA	NA	NA	89791859	89792034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89791900_89792000
ES.21929.1	chr3	+	3719	2	Antisense	novelGene_ENSMUSG00000027947.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCACATCCAGGATGGA	NA	False	NA	NA	False	NA	NA	NA	89794517	89810237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89798201_89810201
ES.21929.2	chr3	+	163	1	Intergenic	novelGene_18127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTAATAA	1564	False	NA	NA	False	NA	NA	NA	89800922	89801085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89800900_89801100
ES.21929.3	chr3	+	159	1	Intergenic	novelGene_18128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATTAATTAATA	8368	False	NA	NA	False	NA	NA	NA	89807726	89807885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89807700_89807900
ES.2193.1	chr1	-	2938	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	-957	3	-957	-3	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTAGTGTGGCACTGG	NA	False	NA	-3	True	AATAAA	-20	NA	190916494	190902495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
ES.2193.2	chr1	-	3150	2	ISM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	9185	15	8953	-15	3prime_fragment	FALSE	canonical	3	65	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCTGGTAAACGTTA	5454	False	NA	-15	True	AATAAA	-8	NA	190906352	190902507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_190903877_190904571
ES.21930.1	chr3	-	4051	6	NNC	ENSMUSG00000027947.12	novel	8639	10	NA	NA	26987	1822	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.65131565932636	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGATGTTCTTCTGCTT	NA	False	NA	-6	True	AATAAA	-18	NA	89793482	89774808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89775196_89775441_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793284
ES.21930.10	chr3	-	2976	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	38	5625	4	-360	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCCCACACCTGCCGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	89820465	89776990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ES.21930.3	chr3	-	4955	11	NNC	ENSMUSG00000027947.12	novel	3343	10	NA	NA	-5	1819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.56508488420533	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGAGATGTTCTTCTG	NA	False	NA	-9	True	AATAAA	-15	NA	89820508	89774811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89775196_89775441_89778694_89784115_89784216_89785150_89785221_89786155_89786203_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ES.21930.5	chr3	-	4833	11	NNC	ENSMUSG00000027947.12	novel	8639	10	NA	NA	4	1819	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.56508488420533	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGAGATGTTCTTCTG	NA	False	NA	-9	True	AATAAA	-15	NA	89820465	89774811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89775196_89775517_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ES.21930.6	chr3	-	3950	5	NNC	ENSMUSG00000027947.12	novel	8639	10	NA	NA	4	1818	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.04975246918104	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTGAGATGTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	89820465	89774812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89775197_89775441_89778439_89796489_89796618_89797543_89797781_89820261
ES.21930.7	chr3	-	4139	5	ISM	ENSMUSG00000027947.12	ENSMUST00000029559.7	3343	10	27220	-1818	27220	1818	3prime_fragment	FALSE	canonical	3	6	junction_4	3.93700393700591	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTGAGATGTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	89793249	89774812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786203_89793208
ES.21930.8	chr3	-	3631	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	1	5007	1	258	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCGTTCACTTCACAC	NA	False	NA	NA	False	NA	NA	NA	89820502	89776372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ES.21930.9	chr3	-	3326	10	FSM	ENSMUSG00000027947.12	ENSMUST00000029559.7	3343	10	15	2	15	-2	multi-exon	FALSE	canonical	2	3	junction_6	3.80058475033046	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTCAGGGGATCGGCG	NA	False	NA	NA	False	ATTAAA	-15	NA	89820454	89776632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786203_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ES.21931.1	chr3	+	2876	1	FSM	ENSMUSG00000105941.2	ENSMUST00000198429.2	1138	1	704	-2442	704	2442	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	741	False	NA	NA	False	GATAAA	-37	NA	89820926	89823802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89820900_89823800
ES.21931.2	chr3	+	188	1	Intergenic	novelGene_18129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGGGGAGCCCTGGA	1192	False	NA	NA	False	NA	NA	NA	89821377	89821565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89821400_89821600
ES.21932.1	chr3	-	5722	27	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-71	4	intron_retention	TRUE	canonical	3	87	junction_26	29.7938677618905	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCTTTTCTTTGATG	1091	False	NA	5	True	TATAAA	-26	NA	89870657	89846783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.11	chr3	-	8313	24	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-9	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	53.5690639499737	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTTGTCTCTTTTCTT	1318	False	NA	0	True	TATAAA	-42	NA	89870430	89846788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89849922_89849961_89850776_89850920_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870328
ES.21932.12	chr3	-	5548	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	89	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.8131487565116	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAATTTGTCTCTTTTCT	1022	False	NA	-1	True	TATAAA	-41	NA	89870726	89846789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855104_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.13	chr3	-	7218	26	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	66	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	43.3275155068924	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAATTTGTCTCTTTTCT	3878	False	NA	-1	True	TATAAA	-41	NA	89867870	89846789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89849922_89849961_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.15	chr3	-	5946	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	-3	intron_retention	FALSE	canonical	3	88	junction_25	27.2712009269852	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3862	False	NA	-2	True	TATAAA	-40	NA	89867886	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.16	chr3	-	7301	25	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	28	-3	intron_retention	FALSE	canonical	3	88	junction_24	27.8727266138225	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3840	False	NA	-2	True	TATAAA	-40	NA	89867908	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.17	chr3	-	5353	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-35	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.2181220416431	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	1127	False	NA	-2	True	TATAAA	-40	NA	89870621	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850526_89850585_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855858_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.18	chr3	-	5277	27	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	42.8260552224596	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	1155	False	NA	-2	True	TATAAA	-40	NA	89870593	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.19	chr3	-	5516	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	55	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	52.3603948299243	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3867	False	NA	-2	True	TATAAA	-40	NA	89867881	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855106_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865358_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.2	chr3	-	5550	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.4864928066076	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTCTCTTTTCTTTG	3811	False	NA	2	True	TATAAA	-44	NA	89867937	89846786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849102_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.20	chr3	-	5502	27	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	48	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	40.516561008757	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3860	False	NA	-2	True	TATAAA	-40	NA	89867888	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853586_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.21	chr3	-	5534	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	52.9194011469469	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTGTCTCTTTTC	3820	False	NA	-2	True	TATAAA	-40	NA	89867928	89846790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855215_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865928_89866297_89866357_89867591
ES.21932.23	chr3	-	6826	26	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	373	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.390573157607	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAATTTGTCTCTTTT	5260	False	NA	-3	True	TATAAA	-39	NA	89866488	89846791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849922_89849961_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297
ES.21932.24	chr3	-	2638	6	NNC	ENSMUSG00000060671.13	novel	4894	17	NA	NA	658	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.1300200959393	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	NA	False	NA	-5	True	TATAAA	-37	NA	89852412	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850760_89850920_89851167_89851415_89851500_89852303
ES.21932.25	chr3	-	5440	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	60	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.6494306749793	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	1222	False	NA	-5	True	TATAAA	-37	NA	89870526	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851269_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.26	chr3	-	5546	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	48	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	42.4289172352003	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	3860	False	NA	-5	True	TATAAA	-37	NA	89867888	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865971_89866297_89866357_89867591
ES.21932.27	chr3	-	5380	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	43.0717014728239	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	1163	False	NA	-5	True	TATAAA	-37	NA	89870585	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.29	chr3	-	5396	28	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	73	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.7360245782879	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	3885	False	NA	-5	True	TATAAA	-37	NA	89867863	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89846837_89846920_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.3	chr3	-	5682	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	-49	-1368	-49	0	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	884	False	NA	1	True	TATAAA	-43	NA	89870864	89846787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.30	chr3	-	5128	25	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.4539986652552	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTAATTTGTCTCTT	3862	False	NA	-5	True	TATAAA	-37	NA	89867886	89846793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855394_89857131_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.31	chr3	-	5580	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	57	1	intron_retention	FALSE	canonical	3	88	junction_25	27.2606382903996	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	3869	False	NA	-6	True	TATAAA	-36	NA	89867879	89846794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.32	chr3	-	5062	26	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.7050856867988	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	1101	False	NA	-6	True	TATAAA	-36	NA	89870647	89846794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852364_89852855_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864373_89865280_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.33	chr3	-	5324	28	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.7360245782879	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	3860	False	NA	-6	True	TATAAA	-36	NA	89867888	89846794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848149_89848328_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.35	chr3	-	5372	28	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_27	39.7802606301476	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGTAATTTGTCTCT	1316	False	NA	-6	True	TATAAA	-36	NA	89870432	89846794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870334
ES.21932.36	chr3	-	5503	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	51.1804146353823	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	1015	False	NA	-7	True	TATAAA	-35	NA	89870733	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870486
ES.21932.37	chr3	-	4605	5	NIC	ENSMUSG00000060671.13	novel	4894	17	NA	NA	113	0	intron_retention	FALSE	canonical	3	164	junction_1	17.6546736021938	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	NA	False	NA	-7	True	TATAAA	-35	NA	89852957	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89851167_89851415_89851500_89852303_89852528_89852788
ES.21932.38	chr3	-	5463	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	42.2237629048638	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3862	False	NA	-7	True	TATAAA	-35	NA	89867886	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865322_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.39	chr3	-	8657	20	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	0	intron_retention	FALSE	canonical	3	88	junction_19	26.0570437518509	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3862	False	NA	-7	True	TATAAA	-35	NA	89867886	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89850776_89850920_89852528_89852788_89853373_89853485_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.4	chr3	-	5625	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	-66	0	-66	0	multi-exon	FALSE	canonical	3	88	junction_26	26.7970677544519	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	3746	False	NA	1	True	TATAAA	-43	NA	89868002	89846787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.40	chr3	-	4594	19	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	59.1170892966964	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	9842	False	NA	-7	True	TATAAA	-35	NA	89861906	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852451_89852788_89852973_89853227_89853373_89853485_89853614_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746
ES.21932.41	chr3	-	5754	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	40	0	intron_retention	FALSE	canonical	3	88	junction_25	27.2835774780361	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3852	False	NA	-7	True	TATAAA	-35	NA	89867896	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.42	chr3	-	6850	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	31	0	intron_retention	FALSE	canonical	3	88	junction_25	26.9697905071582	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3843	False	NA	-7	True	TATAAA	-35	NA	89867905	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.43	chr3	-	5351	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	52.5391372858897	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3931	False	NA	-7	True	TATAAA	-35	NA	89867817	89846795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850526_89850585_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.44	chr3	-	5443	25	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	48	-1	intron_retention	FALSE	canonical	1	1	junction_9	61.6095315271915	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTGAGTAATTTGTCT	3860	False	NA	-8	True	TATAAA	-34	NA	89867888	89846796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89854097_89855106_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.45	chr3	-	5280	28	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.9577490058589	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTGAGTAATTTGTCT	3885	False	NA	-8	True	TATAAA	-34	NA	89867863	89846796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848149_89848328_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.46	chr3	-	5508	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	41.9605337255443	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	3844	False	NA	-9	True	TATAAA	-33	NA	89867904	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859990_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.48	chr3	-	5406	26	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	86	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	53.9993185142183	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	3898	False	NA	-9	True	TATAAA	-33	NA	89867850	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864396_89864604_89864676_89865115_89865189_89865588_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.49	chr3	-	5307	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	52.8243718951581	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	1205	False	NA	-9	True	TATAAA	-33	NA	89870543	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864323_89864398_89864604_89864676_89865115_89865189_89865322_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.5	chr3	-	5444	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	41.9719144190493	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	3796	False	NA	1	True	TATAAA	-43	NA	89867952	89846787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.50	chr3	-	5598	27	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-42	-2	intron_retention	FALSE	canonical	1	1	junction_1	53.5387931024216	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	1120	False	NA	-9	True	TATAAA	-33	NA	89870628	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89849113_89850526_89850585_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.51	chr3	-	4842	29	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.5457137101029	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	1103	False	NA	-9	True	TATAAA	-33	NA	89870645	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89847624_89848234_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.52	chr3	-	5422	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	41.9917750469974	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTGAGTAATTTGTC	3862	False	NA	-9	True	TATAAA	-33	NA	89867886	89846797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852451_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.53	chr3	-	5494	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	42.2237629048638	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGAGAGGTGAGTAA	3844	False	NA	-15	True	TATAAA	-27	NA	89867904	89846803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.54	chr3	-	6533	25	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	62	-9	intron_retention	FALSE	canonical	3	88	junction_24	25.814206629081	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCTGAGAGGTGAGTA	3874	False	NA	-16	True	TATAAA	-26	NA	89867874	89846804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.55	chr3	-	5447	28	NIC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-67	-10	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	41.3655124970387	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTCTGAGAGGTGAGT	1095	False	NA	-17	True	TATAAA	-25	NA	89870653	89846805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853586_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.56	chr3	-	4310	17	NNC	ENSMUSG00000060671.13	novel	4894	17	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	48.1728252622783	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTTCTGAGAGGTGAG	NA	False	NA	-18	True	TATAAA	-24	NA	89857757	89846806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89857639
ES.21932.59	chr3	-	5298	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	159	-1192	-70	-168	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGTTCTCTCTCA	1092	False	NA	NA	False	NA	NA	NA	89870656	89846963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.60	chr3	-	5285	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	86	188	86	-180	multi-exon	FALSE	canonical	3	88	junction_26	26.7970677544519	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATTATTTTTT	3898	False	NA	NA	False	NA	NA	NA	89867850	89846975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.61	chr3	-	5086	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-58	-186	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	43.0717014728239	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTATATATATATATTA	1269	False	NA	NA	False	NA	NA	NA	89870479	89846981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865301_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.62	chr3	-	4165	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	219	-119	-10	119	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTGTTGTTTGGTTT	1152	False	NA	NA	False	NA	NA	NA	89870596	89848036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.63	chr3	-	4240	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	51	1268	51	100	multi-exon	FALSE	canonical	3	88	junction_26	26.7970677544519	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTGTCCTCTTGGTTTA	3863	False	NA	NA	False	NA	NA	NA	89867885	89848055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.7	chr3	-	5375	28	NNC	ENSMUSG00000060671.13	novel	4265	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	43.0717014728239	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTTGTCTCTTTTCTT	1152	False	NA	0	True	TATAAA	-42	NA	89870596	89846788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865322_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ES.21932.8	chr3	-	7348	25	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	88	junction_24	27.8387906326566	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTTGTCTCTTTTCTT	3789	False	NA	0	True	TATAAA	-42	NA	89867959	89846788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21932.9	chr3	-	5614	27	NNC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	42.3374021557981	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATTTGTCTCTTTTCTT	3866	False	NA	0	True	TATAAA	-42	NA	89867882	89846788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89848739_89848981_89849113_89850526_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ES.21933.1	chr3	+	177	1	Intergenic	novelGene_18130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCACAGATC	NA	False	NA	NA	False	NA	NA	NA	89877560	89877737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89877600_89877700
ES.21934.1	chr3	+	156	1	Intergenic	novelGene_18131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	89884889	89885045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89884900_89885000
ES.21935.1	chr3	-	159	1	Intergenic	novelGene_18132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5304	False	NA	NA	False	NA	NA	NA	89886168	89886009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89886000_89886200
ES.21936.1	chr3	+	172	1	Intergenic	novelGene_18133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	89888398	89888570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89888400_89888600
ES.21937.1	chr3	-	169	1	Intergenic	novelGene_18134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTAAAAGGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	89892902	89892733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89892700_89892900
ES.21938.1	chr3	-	256	1	Intergenic	novelGene_18135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTTTG	5806	False	NA	NA	False	NA	NA	NA	89898706	89898450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89898400_89898700
ES.21939.1	chr3	+	572	4	FSM	ENSMUSG00000105552.2	ENSMUST00000200257.2	640	4	-14	82	-14	-82	multi-exon	FALSE	canonical	1	1	junction_1	5.18544972870135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGAGTTGGTTCTA	NA	False	NA	NA	False	AAGAAA	-31	NA	89906052	89908550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89906229_89906451_89906605_89907478_89907593_89908421
ES.2194.1	chr1	+	546	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	22	148	2	-148	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTCAGTTTCTTCT	NA	False	NA	11	True	GATAAA	-17	NA	190956672	190957884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_190956740_190957405
ES.21940.1	chr3	+	6597	6	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGCAAGAAC	1372	False	NA	NA	False	NA	NA	NA	89914267	89925786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89917821_89919991_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.10	chr3	+	3147	2	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	1372	False	NA	NA	False	NA	NA	NA	89914267	89921738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915667_89919990
ES.21940.11	chr3	+	4127	2	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTTGGGTATATATCT	1372	False	NA	NA	False	NA	NA	NA	89914267	89919142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915666_89916413
ES.21940.12	chr3	+	3113	8	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAACAGACAAGCTTGT	1372	False	NA	NA	False	NA	NA	NA	89914267	89925798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89916634_89917738_89917821_89919991_89920047_89922436_89922531_89922614_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.13	chr3	+	5835	23	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	5846	26884	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATCATCTTTCCTCTAC	1372	False	NA	NA	False	AAAAAG	-9	NA	89914267	89955636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89915666_89916413_89917816_89919989_89920047_89922436_89922525_89922608_89922806_89924007_89924079_89924421_89924595_89925718_89925776_89926458_89926651_89928205_89928377_89928545_89928824_89930737_89930933_89932366_89932542_89933899_89933988_89935633_89935681_89938598_89938677_89941370_89941485_89941962_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952238_89955076
ES.21940.14	chr3	+	4719	24	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	5846	26875	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAACCTAATCATCT	1372	False	NA	NA	False	NA	NA	NA	89914267	89955627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89915666_89916413_89916634_89917738_89917821_89919991_89920047_89922436_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718_89925776_89926458_89926651_89928205_89928377_89928545_89928824_89930737_89930935_89932367_89932542_89933899_89933988_89935633_89935689_89938620_89938677_89941370_89941485_89941961_89942006_89945674_89945773_89946154_89946324_89951006_89951118_89952160_89952238_89955075
ES.21940.15	chr3	+	3464	4	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACCAAAAAAACATAGGT	1372	False	NA	NA	False	NA	NA	NA	89914267	89921755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915666_89916413_89916634_89917738_89917821_89919991
ES.21940.16	chr3	+	2352	9	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAACAGACAAGCTTGT	1372	False	NA	NA	False	NA	NA	NA	89914267	89925798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915670_89916418_89916634_89917738_89917821_89919991_89920047_89922436_89922509_89922604_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.17	chr3	+	5502	7	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAACAGACAAGCTTGT	1374	False	NA	NA	False	NA	NA	NA	89914269	89925798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89916634_89917738_89917821_89919991_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.18	chr3	+	178	1	Intergenic	novelGene_18137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTCTTTCCACATGA	NA	False	NA	NA	False	NA	NA	NA	89931771	89931949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89931800_89931900
ES.21940.19	chr3	+	177	1	Antisense	novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	89944067	89944244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89944100_89944200
ES.21940.2	chr3	+	3456	8	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAGCAAGA	1372	False	NA	NA	False	NA	NA	NA	89914267	89925784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915666_89916413_89917821_89919991_89920047_89922436_89922531_89922614_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.3	chr3	+	4875	1	Antisense	novelGene_ENSMUSG00000077569.3_AS_novelGene_ENSMUSG00000098397.3_AS_novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTTGGGTATATATCT	1372	False	NA	NA	False	NA	NA	NA	89914267	89919142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89914300_89919100
ES.21940.4	chr3	+	3071	1	Antisense	novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATAAATTATAAAAAA	1372	False	NA	NA	False	NA	NA	NA	89914267	89917338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89914300_89917300
ES.21940.5	chr3	+	2366	9	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAACAGACAAGCTTGT	1372	False	NA	NA	False	NA	NA	NA	89914267	89925798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915666_89916413_89916634_89917738_89917821_89919991_89920047_89922436_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718
ES.21940.6	chr3	+	5415	17	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	5846	10655	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTTTTTTTTAAAATATT	1372	False	NA	NA	False	ATTAAA	-42	NA	89914267	89939407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89915143_89915565_89915666_89916413_89916634_89917738_89917821_89919992_89920047_89922436_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718_89925776_89926458_89928377_89928545_89928824_89930737_89930936_89932369_89932542_89933899_89933988_89935633_89935689_89938620
ES.21940.7	chr3	+	5828	23	Genic_Genomic	ENSMUSG00000105552.2	novel	493	3	NA	NA	5846	26879	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCTAATCATCTTTCC	1372	False	NA	NA	False	AAAAAG	-4	NA	89914267	89955631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_89915666_89916413_89917820_89919990_89920047_89922436_89922525_89922607_89922805_89924005_89924079_89924421_89924595_89925718_89925776_89926458_89926651_89928205_89928377_89928545_89928824_89930737_89930935_89932367_89932542_89933899_89933988_89935633_89935689_89938620_89938677_89941370_89941485_89941961_89942006_89945674_89945773_89946154_89946324_89951006_89951118_89952160_89952238_89955075
ES.21940.8	chr3	+	7050	6	Antisense	novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGCAAGAAC	1372	False	NA	NA	False	NA	NA	NA	89914267	89925786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_89915666_89916413_89917821_89919991_89922525_89922607_89924079_89924421_89924595_89925718
ES.21940.9	chr3	+	1950	2	Intergenic	novelGene_18136	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAACAAAAG	1372	False	NA	NA	False	NA	NA	NA	89914267	89916965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_89915666_89916413
ES.21941.1	chr3	+	1677	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	-57	890	-57	6	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTAGAGTGGTCTTT	NA	False	NA	16	True	AATAAA	-26	NA	89960063	89969758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ES.21941.10	chr3	+	2777	6	NIC	ENSMUSG00000027942.18	novel	1411	7	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	217.059438864105	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGATCATTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	89960124	89969745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ES.21941.11	chr3	+	6922	7	NIC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	4	2534	intron_retention	FALSE	canonical	3	130	junction_6	134.277076723219	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGGCTGGCAGGATG	NA	False	NA	10	True	AATAAA	-19	NA	89960124	89973182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89971862_89972816
ES.21941.12	chr3	+	3085	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-85	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	227.149050973198	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCAGATTTGGGCTGGCA	NA	False	NA	5	True	AATAAA	-14	NA	89960125	89973177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965793_89965959_89966048_89966108_89967668_89969426_89970515_89970557_89971731_89971859_89972816
ES.21941.13	chr3	+	2909	10	NIC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-85	3	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	208.856203116515	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGGCTGGCAGGATG	NA	False	NA	10	True	AATAAA	-19	NA	89960125	89973182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668_89969240_89970515_89970557_89971731_89971862_89972816
ES.21941.14	chr3	+	1623	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	-75	-3	-75	3	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGGCTGGCAGGATG	NA	False	NA	10	True	AATAAA	-19	NA	89960135	89973182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
ES.21941.15	chr3	+	1525	7	NNC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	176.722632644743	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATCATTTCTTTAGAGT	NA	False	NA	9	True	AATAAA	-19	NA	89960136	89969751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965863_89965959_89966048_89966108_89968944
ES.21941.16	chr3	+	4355	7	NIC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	1	2726	intron_retention	FALSE	canonical	3	130	junction_6	130.570223762286	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTAGGCCACAGGGC	NA	False	NA	13	True	AAAAAG	-2	NA	89960136	89973374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89966108_89968944_89971862_89972816
ES.21941.17	chr3	+	1250	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	19	1241	4	82	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGATGTAAGTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	89960139	89969407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ES.21941.18	chr3	+	1398	6	NNC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	191.703312438779	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGGATCATTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	89960148	89969745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965837_89968944
ES.21941.2	chr3	+	2908	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	-46	-1451	-18	0	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	False	NA	10	True	AATAAA	-20	NA	89960102	89969752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ES.21941.20	chr3	+	1407	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	1	3	1	-3	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATGAGTTGTTTGGGCT	NA	False	NA	NA	False	ATTAAA	-40	NA	89960149	89968298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ES.21941.21	chr3	+	4048	8	NIC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-51	1	intron_retention	FALSE	canonical	3	130	junction_7	124.701930332178	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGGGCTGGCAGGA	NA	False	NA	8	True	AATAAA	-17	NA	89960159	89973180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89971862_89972816
ES.21941.22	chr3	+	4966	5	Fusion	ENSMUSG00000027942.18_ENSMUSG00000118506.2	novel	1385	5	NA	NA	-165	-27	intron_retention	FALSE	canonical	0	0	junction_3	211.104683747187	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAGGAAAGA	2341	False	NA	NA	False	NA	NA	NA	89965786	89975627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89965959_89966048_89966108_89968944_89970739_89971731_89971862_89972816
ES.21941.23	chr3	+	2251	4	Fusion	ENSMUSG00000027942.18_ENSMUSG00000118506.2	novel	815	2	NA	NA	96	-2	intron_retention	FALSE	canonical	3	39	junction_2	176.258017942132	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGGGCTGGCAGGA	2602	False	NA	8	True	AATAAA	-17	NA	89966047	89973180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89966108_89968944_89969426_89970515_89971862_89972816
ES.21941.24	chr3	+	4070	2	Fusion	ENSMUSG00000118506.2_ENSMUSG00000027942.18	novel	3097	4	NA	NA	-1750	195	intron_retention	FALSE	canonical	3	130	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGCCACAGGGCTTA	4907	False	NA	16	True	AAAAAG	-5	NA	89968352	89973377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89971862_89972816
ES.21941.3	chr3	+	4311	5	NIC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	-12	1	intron_retention	FALSE	canonical	3	422	junction_2	34.128433893163	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATCATTTCTTTAGAG	NA	False	NA	8	True	AATAAA	-18	NA	89960108	89969750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89963632_89963835_89963890_89965791_89966108_89968944
ES.21941.4	chr3	+	2924	9	NIC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-102	1	intron_retention	FALSE	canonical	3	70	junction_7	165.736236230946	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTGGGCTGGCAGGA	NA	False	NA	8	True	AATAAA	-17	NA	89960108	89973180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89970557_89971731_89971862_89972816
ES.21941.5	chr3	+	1485	6	NIC	ENSMUSG00000027942.18	novel	2510	7	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	194.418517636567	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATGGATCATTTCT	NA	False	NA	2	True	AATAAA	-12	NA	89960123	89969744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89960427_89960814_89960917_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ES.21941.6	chr3	+	1828	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	-86	-197	-86	0	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAGGCCACAGGGCTT	NA	False	NA	15	True	AAAAAG	-4	NA	89960124	89973376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
ES.21941.7	chr3	+	1820	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-86	3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGGCTGGCAGGATG	NA	False	NA	10	True	AATAAA	-19	NA	89960124	89973182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
ES.21941.8	chr3	+	6996	6	Fusion	ENSMUSG00000027942.18_ENSMUSG00000118506.2	novel	1411	7	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	192.885872992296	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTGGGCTGGCAGGAT	NA	False	NA	9	True	AATAAA	-18	NA	89960124	89973181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89966854_89967823
ES.21941.9	chr3	+	2014	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAGGCCACAGGGCTT	NA	False	NA	15	True	AAAAAG	-4	NA	89960124	89973376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
ES.21942.1	chr3	-	5380	1	Genic_Genomic	ENSMUSG00000027944.14	novel	NA	NA	NA	NA	-15	2190	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAAGAAAGAA	7252	False	NA	NA	False	NA	NA	NA	89905942	89900562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_89900600_89905900
ES.21942.10	chr3	-	4487	35	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	-11	1	multi-exon	FALSE	non_canonical	0	0	junction_7	497.472935745562	1746	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	3536	False	NA	NA	False	AATAAA	-17	NA	89959793	89902761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834_89905963_89909124_89909188_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.100	chr3	-	4168	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.648056973079	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3542	False	NA	-11	True	AATAAA	-19	NA	89959787	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908308_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.101	chr3	-	3611	30	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_29	352.11312161885	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3577	False	NA	-11	True	AATAAA	-19	NA	89959752	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.102	chr3	-	3512	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_27	362.760964199259	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3550	False	NA	-11	True	AATAAA	-19	NA	89959779	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.103	chr3	-	3472	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	336.371724287079	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938665_89941367_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.105	chr3	-	3439	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	338.621999743907	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3544	False	NA	-11	True	AATAAA	-19	NA	89959785	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.106	chr3	-	3452	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	286.078221339007	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3550	False	NA	-12	True	AATAAA	-18	NA	89959779	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89908646_89908702_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.107	chr3	-	3436	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	305.635585479033	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3542	False	NA	-12	True	AATAAA	-18	NA	89959787	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.108	chr3	-	3491	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	282.60942435576	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3587	False	NA	-12	True	AATAAA	-18	NA	89959742	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.109	chr3	-	3483	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	271.998743244396	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3548	False	NA	-12	True	AATAAA	-18	NA	89959781	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.11	chr3	-	845	6	FSM	ENSMUSG00000027944.14	ENSMUST00000197786.5	857	6	12	0	1	0	multi-exon	FALSE	canonical	3	24	junction_4	742.362876226984	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7222	False	NA	NA	False	AATAAA	-16	NA	89905972	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89905108_89905311_89905834
ES.21942.113	chr3	-	5057	27	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-3	intron_retention	FALSE	canonical	1	3	junction_1	297.486482214893	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3550	False	NA	-12	True	AATAAA	-18	NA	89959779	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.114	chr3	-	4158	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	140	junction_3	325.83128255488	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3548	False	NA	-12	True	AATAAA	-18	NA	89959781	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.115	chr3	-	3459	27	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-62	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	340.404799488481	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3332	False	NA	-12	True	AATAAA	-18	NA	89959997	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.116	chr3	-	3971	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	317.627863282817	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3537	False	NA	-12	True	AATAAA	-18	NA	89959792	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920017_89922714_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.119	chr3	-	4736	24	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	461	-3	intron_retention	FALSE	canonical	0	0	junction_4	345.682366742576	1411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	NA	False	NA	-12	True	AATAAA	-18	NA	89945702	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89913590_89913809_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676
ES.21942.12	chr3	-	8124	33	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	0	intron_retention	FALSE	canonical	3	314	junction_6	363.035848565607	1746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	3536	False	NA	NA	False	AATAAA	-16	NA	89959793	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.120	chr3	-	3475	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	300.213546445506	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3548	False	NA	-12	True	AATAAA	-18	NA	89959781	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909204_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.122	chr3	-	4185	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	292.852570857569	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCTCACCTTAATG	3556	False	NA	-12	True	AATAAA	-18	NA	89959773	89907449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.123	chr3	-	3350	27	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	264.732096354478	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATCTCTCACCTTAAT	3536	False	NA	-13	True	AATAAA	-17	NA	89959793	89907450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.125	chr3	-	3222	18	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1761	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	304.044865565621	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATCTCTCACCTTAAT	NA	False	NA	-13	True	AATAAA	-17	NA	89932498	89907450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369
ES.21942.127	chr3	-	8538	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	9	junction_19	363.105497122828	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATCTCTCACCTTAA	3543	False	NA	-14	True	AATAAA	-16	NA	89959786	89907451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.128	chr3	-	3432	27	NIC	ENSMUSG00000042520.17	novel	3385	27	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	342.011548647533	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATCTCTCACCTTAA	3548	False	NA	-14	True	AATAAA	-16	NA	89959781	89907451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.129	chr3	-	4232	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	140	junction_2	294.825893147521	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATCTCTCACCTTAA	3546	False	NA	-14	True	AATAAA	-16	NA	89959783	89907451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.13	chr3	-	1017	7	FSM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	7	-169	7	0	multi-exon	FALSE	canonical	3	67	junction_6	657.328853940113	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7505	False	NA	NA	False	AATAAA	-16	NA	89905689	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905631
ES.21942.131	chr3	-	3322	27	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	314.772391235355	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATCTCTCACCTTAA	3542	False	NA	-14	True	AATAAA	-16	NA	89959787	89907451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.137	chr3	-	3443	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	289.922093247585	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGATCTCTCACCTTA	3534	False	NA	-15	True	AATAAA	-15	NA	89959795	89907452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909143_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.138	chr3	-	4161	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-12	-7	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAAGATCTCTCACCTT	3535	False	NA	-16	True	AATAAA	-14	NA	89959794	89907453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.140	chr3	-	3523	30	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	323.934250018912	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAAGATCTCTCACCTT	3542	False	NA	-16	True	AATAAA	-14	NA	89959787	89907453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89908646_89908721_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.141	chr3	-	4200	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	367.737922368848	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCCATTCTTGCTC	3569	False	NA	NA	False	AAAAAG	-30	NA	89959760	89907587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.142	chr3	-	4039	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-52	-12	1	7	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCCATTCTTGCTC	3508	False	NA	NA	False	AAAAAG	-30	NA	89959821	89907587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.143	chr3	-	4015	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	399	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	298.656043131167	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCCATTCTTGCT	8122	False	NA	NA	False	AAAAAG	-29	NA	89955207	89907588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909597_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.147	chr3	-	4124	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.541526273147	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTGCCCATTCTTG	3536	False	NA	NA	False	AAAAAG	-27	NA	89959793	89907590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.148	chr3	-	4865	23	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	395	4	intron_retention	FALSE	canonical	3	9	junction_18	299.348883632846	1411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTGCCCATTCTTG	NA	False	NA	NA	False	AAAAAG	-27	NA	89945768	89907590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676
ES.21942.149	chr3	-	4003	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	271.443411003526	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTGCCCATTCTTG	3532	False	NA	NA	False	AAAAAG	-27	NA	89959797	89907590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.15	chr3	-	921	6	NIC	ENSMUSG00000027944.14	novel	857	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	744.740115745083	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7210	False	NA	NA	False	AATAAA	-16	NA	89905984	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89905044_89905311_89905834
ES.21942.150	chr3	-	4132	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_29	313.960065471802	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCCATTC	3601	False	NA	NA	False	AAAAAG	-24	NA	89959728	89907593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.151	chr3	-	4048	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCCATTC	3508	False	NA	NA	False	AAAAAG	-24	NA	89959821	89907593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.152	chr3	-	4061	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	228.423841363276	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3543	False	NA	NA	False	AAAAAG	-22	NA	89959786	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.153	chr3	-	4030	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	239.415239833374	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3542	False	NA	NA	False	AAAAAG	-22	NA	89959787	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.154	chr3	-	4039	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	261.982517558277	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3548	False	NA	NA	False	AAAAAG	-22	NA	89959781	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.155	chr3	-	4070	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3535	False	NA	NA	False	AAAAAG	-22	NA	89959794	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.156	chr3	-	4068	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3522	False	NA	NA	False	AAAAAG	-22	NA	89959807	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.157	chr3	-	4100	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.063024122986	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3586	False	NA	NA	False	AAAAAG	-22	NA	89959743	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908308_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.158	chr3	-	4083	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	265.912570026238	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCAGCCTCTGCCCAT	3519	False	NA	NA	False	AAAAAG	-22	NA	89959810	89907595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909188_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.159	chr3	-	4156	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	304.007325703893	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCAGCCTCTGCCCA	3546	False	NA	NA	False	AAAAAG	-21	NA	89959783	89907596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.16	chr3	-	1261	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	681.700671523474	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7175	False	NA	NA	False	AATAAA	-16	NA	89906019	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905305_89905711
ES.21942.160	chr3	-	3941	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	243.868307656591	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTCAGCCTCTGCCCA	3537	False	NA	NA	False	AAAAAG	-21	NA	89959792	89907596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.161	chr3	-	4362	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	305.083166563493	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTCAGCCTCTGCCC	3542	False	NA	NA	False	AAAAAG	-20	NA	89959787	89907597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89913590_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.164	chr3	-	5225	26	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-9	1	intron_retention	FALSE	canonical	3	158	junction_18	212.350449964204	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCTTCAGCCTCTGCC	3538	False	NA	NA	False	AAAAAG	-19	NA	89959791	89907598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.166	chr3	-	4101	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	284.533015724076	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3547	False	NA	99	True	AAAAAG	-18	NA	89959782	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.167	chr3	-	4072	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-4	5	-4	0	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3543	False	NA	99	True	AAAAAG	-18	NA	89959786	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.169	chr3	-	4155	30	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	323.317759124119	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3538	False	NA	99	True	AAAAAG	-18	NA	89959791	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89908646_89908721_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.17	chr3	-	855	6	FSM	ENSMUSG00000027944.14	ENSMUST00000197725.5	648	6	-69	-138	-3	0	multi-exon	FALSE	canonical	3	12	junction_5	740.896591974885	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7198	False	NA	NA	False	AATAAA	-16	NA	89905996	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905834
ES.21942.170	chr3	-	4123	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	277.185793802125	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3543	False	NA	99	True	AAAAAG	-18	NA	89959786	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.171	chr3	-	2750	18	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	305.822856204638	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3536	False	NA	99	True	AAAAAG	-18	NA	89959793	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928668_89952148_89952239_89955076_89955207_89959761
ES.21942.172	chr3	-	3958	27	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	319.073186314444	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3586	False	NA	99	True	AAAAAG	-18	NA	89959743	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933895_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.173	chr3	-	4142	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	287.205901039371	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3542	False	NA	99	True	AAAAAG	-18	NA	89959787	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.175	chr3	-	4193	30	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	362.919254457032	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3548	False	NA	99	True	AAAAAG	-18	NA	89959781	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.176	chr3	-	4085	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	264.679514775583	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3548	False	NA	99	True	AAAAAG	-18	NA	89959781	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.177	chr3	-	4867	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-2	0	intron_retention	FALSE	canonical	3	314	junction_1	191.998335326574	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3545	False	NA	99	True	AAAAAG	-18	NA	89959784	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.178	chr3	-	3740	2	FSM	ENSMUSG00000042520.17	ENSMUST00000200301.2	620	2	-1014	-2106	-1014	0	multi-exon	FALSE	canonical	3	574	junction_1	0	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	1087	False	NA	99	True	AAAAAG	-18	NA	89912107	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89909784_89910551
ES.21942.18	chr3	-	1275	6	NIC	ENSMUSG00000027944.14	novel	855	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	12	junction_5	740.896591974885	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7504	False	NA	NA	False	AATAAA	-16	NA	89905690	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905108
ES.21942.180	chr3	-	4176	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	313.4743646551	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3600	False	NA	99	True	AAAAAG	-18	NA	89959729	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959611
ES.21942.181	chr3	-	4016	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	300.465112701321	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3550	False	NA	99	True	AAAAAG	-18	NA	89959779	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.182	chr3	-	4039	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	292.852570857569	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3552	False	NA	99	True	AAAAAG	-18	NA	89959777	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.185	chr3	-	4126	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	296.358898868881	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3550	False	NA	99	True	AAAAAG	-18	NA	89959779	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.186	chr3	-	4069	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_3	342.047646670157	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3552	False	NA	99	True	AAAAAG	-18	NA	89959777	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.187	chr3	-	4143	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	328.804138830775	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3579	False	NA	99	True	AAAAAG	-18	NA	89959750	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956183_89959696
ES.21942.188	chr3	-	4020	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	357.328408079809	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3546	False	NA	99	True	AAAAAG	-18	NA	89959783	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.19	chr3	-	5506	7	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	1139	7	NA	NA	-29	0	intron_retention	FALSE	canonical	3	574	junction_6	474.92013948546	1377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	2569	False	NA	NA	False	AATAAA	-16	NA	89910625	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89909784_89910551
ES.21942.191	chr3	-	4091	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	312.042242283617	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3524	False	NA	99	True	AAAAAG	-18	NA	89959805	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941375_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.193	chr3	-	4369	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	398	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	317.637861761613	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	8121	False	NA	99	True	AAAAAG	-18	NA	89955208	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89913590_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.194	chr3	-	4172	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	335.965658169682	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3552	False	NA	99	True	AAAAAG	-18	NA	89959777	89907599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.195	chr3	-	4000	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	328.248341864662	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTACCTTCAGCCTC	3548	False	NA	96	True	AAAAAG	-15	NA	89959781	89907602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959761
ES.21942.196	chr3	-	3969	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	278.999077430555	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTACCTTCAGCCTC	3536	False	NA	96	True	AAAAAG	-15	NA	89959793	89907602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.197	chr3	-	4020	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	284.92133491867	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTACCTTCAGCCTC	3542	False	NA	96	True	AAAAAG	-15	NA	89959787	89907602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.198	chr3	-	4065	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	310.119163786438	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTACCTTCAGCCTC	3386	False	NA	96	True	AAAAAG	-15	NA	89959943	89907602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.199	chr3	-	4455	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	197	junction_1	206.626287041535	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTACCTTCAGCCTC	3538	False	NA	96	True	AAAAAG	-15	NA	89959791	89907602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.2	chr3	-	1929	2	NNC	ENSMUSG00000027944.14	novel	837	2	NA	NA	-11	2170	intron_retention	FALSE	canonical	0	0	junction_1	0	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	7179	False	NA	NA	False	NA	NA	NA	89906015	89900582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89900605_89904108
ES.21942.20	chr3	-	2317	5	NIC	ENSMUSG00000027944.14	novel	857	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	1712	junction_3	114.217719728596	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7253	False	NA	NA	False	AATAAA	-16	NA	89905941	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89905311_89905834
ES.21942.200	chr3	-	4115	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	341.974153158644	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTCTACCTTCAGCCT	3548	False	NA	95	True	AAAAAG	-14	NA	89959781	89907603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.201	chr3	-	4968	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-5	intron_retention	FALSE	canonical	3	204	junction_23	281.55840566829	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCTCTACCTTCAGCC	3552	False	NA	94	True	AAAAAG	-13	NA	89959777	89907604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.202	chr3	-	4119	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-7	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	315.448894048216	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAACAAACCTC	3540	False	NA	83	True	AAAAAG	-2	NA	89959789	89907615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89908646_89908721_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.203	chr3	-	3992	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.648056973079	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAGAAAAAAAAAA	3543	False	NA	75	True	NA	NA	NA	89959786	89907623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908308_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.204	chr3	-	4023	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	304.42274748066	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAGAAAAAAAAAA	3545	False	NA	75	True	NA	NA	NA	89959784	89907623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.205	chr3	-	4033	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-21	-24	combination_of_known_junctions	FALSE	canonical	3	117	junction_27	268.657940815523	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAGAAAAAAAAAA	3919	False	NA	75	True	NA	NA	NA	89959410	89907623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.207	chr3	-	8971	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	398	-25	intron_retention	FALSE	canonical	3	197	junction_1	271.320995944355	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	8121	False	NA	74	True	NA	NA	NA	89955208	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.208	chr3	-	3826	1	NIC	ENSMUSG00000042520.17	novel	3385	27	NA	NA	-357	-25	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1044	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	1744	False	NA	74	True	NA	NA	NA	89911450	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907600_89911400
ES.21942.209	chr3	-	4913	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	-25	intron_retention	FALSE	canonical	3	140	junction_2	260.88043921791	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3536	False	NA	74	True	NA	NA	NA	89959793	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.21	chr3	-	1681	5	NNC	ENSMUSG00000027944.14	novel	857	6	NA	NA	19	0	intron_retention	TRUE	canonical	0	0	junction_4	823.35441943309	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7240	False	NA	NA	False	AATAAA	-16	NA	89905954	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903700_89904872
ES.21942.210	chr3	-	5266	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	-25	intron_retention	FALSE	canonical	3	289	junction_18	190.168941552928	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3546	False	NA	74	True	NA	NA	NA	89959783	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.214	chr3	-	3988	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-13	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	320.123771502419	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3534	False	NA	74	True	NA	NA	NA	89959795	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926455_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955082_89955207_89959761
ES.21942.216	chr3	-	4011	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-25	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_13	320.897434139495	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3543	False	NA	74	True	NA	NA	NA	89959786	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928170_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.218	chr3	-	4137	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	398	-25	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	370.575262949652	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	8121	False	NA	74	True	NA	NA	NA	89955208	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928170_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.219	chr3	-	4061	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-7	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	287.439026364812	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3577	False	NA	74	True	NA	NA	NA	89959752	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909188_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.220	chr3	-	4075	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-2	-25	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	319.85000271173	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3545	False	NA	74	True	NA	NA	NA	89959784	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.223	chr3	-	3942	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	309.443586673457	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3550	False	NA	74	True	NA	NA	NA	89959779	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.225	chr3	-	3972	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-36	-25	combination_of_known_junctions	FALSE	canonical	3	117	junction_26	285.559774154877	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3904	False	NA	74	True	NA	NA	NA	89959425	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.229	chr3	-	3975	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	9	-25	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	292.30759209275	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3403	False	NA	74	True	NA	NA	NA	89959926	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.23	chr3	-	1850	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	687.062749843289	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7208	False	NA	NA	False	AATAAA	-16	NA	89905986	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89903954_89904882_89905044_89905311_89905834
ES.21942.232	chr3	-	4114	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	218	-25	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_28	346.284808167131	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	4158	False	NA	74	True	NA	NA	NA	89959171	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959095
ES.21942.233	chr3	-	4154	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	12	-25	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_29	348.272260138424	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3596	False	NA	74	True	NA	NA	NA	89959733	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.235	chr3	-	4025	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	398	-25	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	380.666745944224	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	8121	False	NA	74	True	NA	NA	NA	89955208	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.236	chr3	-	4057	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-25	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	350.831139353667	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3552	False	NA	74	True	NA	NA	NA	89959777	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.238	chr3	-	4085	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-3	-25	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	312.984620147667	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAGAAAAAAAAA	3581	False	NA	74	True	NA	NA	NA	89959748	89907624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.239	chr3	-	3970	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	6	-27	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	300.65322374248	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAGGAGAAAAAAA	3576	False	NA	72	True	NA	NA	NA	89959753	89907626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.243	chr3	-	3943	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	-111	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	228.423841363276	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGAAGTGTTTTTTTT	3546	False	NA	-12	True	CATAAA	-24	NA	89959783	89907710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.244	chr3	-	3948	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	2	-111	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	239.415239833374	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGAAGTGTTTTTTTT	3509	False	NA	-12	True	CATAAA	-24	NA	89959820	89907710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.245	chr3	-	3940	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-7	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	285.094298309474	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTGAAGTGTTTTTTT	3540	False	NA	-13	True	CATAAA	-23	NA	89959789	89907711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945670_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.246	chr3	-	3888	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-112	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	278.999077430555	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTGAAGTGTTTTTTT	3508	False	NA	-13	True	CATAAA	-23	NA	89959821	89907711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.247	chr3	-	3915	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-113	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTTGAAGTGTTTTTT	3522	False	NA	-14	True	CATAAA	-22	NA	89959807	89907712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.248	chr3	-	3914	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-52	113	1	-113	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTTGAAGTGTTTTTT	3508	False	NA	-14	True	CATAAA	-22	NA	89959821	89907712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.249	chr3	-	3936	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-5	-113	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	292.852570857569	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTTGAAGTGTTTTTT	3542	False	NA	-14	True	CATAAA	-22	NA	89959787	89907712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.25	chr3	-	1274	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199014.5	1280	6	7	-1	1	0	multi-exon	FALSE	canonical	3	1706	junction_4	119.761429517186	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7208	False	NA	NA	False	AATAAA	-16	NA	89905986	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905311_89905834
ES.21942.251	chr3	-	3955	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-1	119	-1	-114	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTAGTTGAAGTGTTTTT	3546	False	NA	-15	True	CATAAA	-21	NA	89959783	89907713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.252	chr3	-	3828	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	12	-115	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	243.868307656591	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTAGTTGAAGTGTTTT	3532	False	NA	-16	True	CATAAA	-20	NA	89959797	89907714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.253	chr3	-	3862	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-1	-115	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	271.443411003526	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTAGTTGAAGTGTTTT	3549	False	NA	-16	True	CATAAA	-20	NA	89959780	89907714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.254	chr3	-	3869	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-3	-117	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	269.861470050379	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGATTAGTTGAAGTGTT	3554	False	NA	-18	True	CATAAA	-18	NA	89959775	89907716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.257	chr3	-	3963	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-118	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	318.674716223213	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGATTAGTTGAAGTGT	3543	False	NA	-19	True	CATAAA	-17	NA	89959786	89907717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.258	chr3	-	3997	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	7	-118	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	344.09664340124	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGATTAGTTGAAGTGT	3591	False	NA	-19	True	CATAAA	-17	NA	89959738	89907717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.259	chr3	-	3932	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	-118	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGATTAGTTGAAGTGT	3536	False	NA	-19	True	CATAAA	-17	NA	89959793	89907717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.260	chr3	-	3873	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	13	-120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	282.416211156037	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGATTAGTTGAAGT	3597	False	NA	-21	True	CATAAA	-15	NA	89959732	89907719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935675_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.261	chr3	-	3994	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-120	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	277.185793802125	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGATTAGTTGAAGT	3552	False	NA	-21	True	CATAAA	-15	NA	89959777	89907719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.263	chr3	-	3979	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-120	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.541526273147	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGATTAGTTGAAGT	3552	False	NA	-21	True	CATAAA	-15	NA	89959777	89907719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.264	chr3	-	3886	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-240	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	285.028444695813	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCCTCCTTTATTATT	3508	False	NA	1	True	AATATA	-19	NA	89959821	89907839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.266	chr3	-	3814	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	12	-240	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCCTCCTTTATTATT	3532	False	NA	1	True	AATATA	-19	NA	89959797	89907839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.267	chr3	-	3797	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-2	-241	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	261.982517558277	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	3545	False	NA	0	True	AATATA	-18	NA	89959784	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.268	chr3	-	3400	24	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	4526	-241	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	298.402666256073	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	9509	False	NA	0	True	AATATA	-18	NA	89951080	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006
ES.21942.269	chr3	-	3797	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	10	-241	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	239.415239833374	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	3530	False	NA	0	True	AATATA	-18	NA	89959799	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.27	chr3	-	3032	3	ISM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	1	10	1	0	intron_retention	FALSE	canonical	3	1953	junction_1	19	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7191	False	NA	NA	False	AATAAA	-16	NA	89906003	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89903018_89903120_89903212_89903317
ES.21942.270	chr3	-	3786	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-4	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	292.524253622629	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	3543	False	NA	0	True	AATATA	-18	NA	89959786	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945670_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.271	chr3	-	3874	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	41	-241	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	3435	False	NA	0	True	AATATA	-18	NA	89959894	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.272	chr3	-	3789	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	-241	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	300.465112701321	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTCCTCCTTTATTAT	3536	False	NA	0	True	AATATA	-18	NA	89959793	89907840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.274	chr3	-	3720	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	6	-242	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	243.868307656591	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCTCCTCCTTTATTA	3513	False	NA	-1	True	AATATA	-17	NA	89959816	89907841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.275	chr3	-	3745	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-9	-243	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	271.443411003526	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3538	False	NA	-2	True	AATATA	-16	NA	89959791	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.276	chr3	-	4149	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	9	-243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	314.997582234082	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3593	False	NA	-2	True	AATATA	-16	NA	89959736	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89913590_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.277	chr3	-	3855	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	140	junction_3	287.370148137931	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3550	False	NA	-2	True	AATATA	-16	NA	89959779	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.278	chr3	-	4149	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-3	-243	intron_retention	FALSE	canonical	3	158	junction_19	252.00179627424	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3544	False	NA	-2	True	AATATA	-16	NA	89959785	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.28	chr3	-	4001	32	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	-4	0	multi-exon	FALSE	canonical	0	0	junction_5	397.811494846292	1746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	3543	False	NA	NA	False	AATAAA	-16	NA	89959786	89902762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.280	chr3	-	4626	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-4	-243	intron_retention	FALSE	canonical	3	314	junction_1	191.998335326574	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3543	False	NA	-2	True	AATATA	-16	NA	89959786	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.281	chr3	-	3842	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-243	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	264.679514775583	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3548	False	NA	-2	True	AATATA	-16	NA	89959781	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.283	chr3	-	3858	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	2	-243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	310.559228551939	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3509	False	NA	-2	True	AATATA	-16	NA	89959820	89907842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945685_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.284	chr3	-	3839	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-244	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	319.85000271173	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAAGTCTCCTCCTTTAT	3562	False	NA	-3	True	AATATA	-15	NA	89959767	89907843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.285	chr3	-	3833	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-244	combination_of_known_junctions	FALSE	canonical	3	117	junction_28	272.721516404929	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAAGTCTCCTCCTTTAT	3935	False	NA	-3	True	AATATA	-15	NA	89959394	89907843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.286	chr3	-	3737	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-244	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	281.812437016297	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAAGTCTCCTCCTTTAT	3548	False	NA	-3	True	AATATA	-15	NA	89959781	89907843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.287	chr3	-	4335	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	6	-244	intron_retention	FALSE	canonical	3	9	junction_19	327.772606203677	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAAGTCTCCTCCTTTAT	3576	False	NA	-3	True	AATATA	-15	NA	89959753	89907843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.29	chr3	-	6774	33	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	3509	29	NA	NA	-1	0	intron_retention	FALSE	canonical	3	137	junction_5	402.963533554837	1746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	3549	False	NA	NA	False	AATAAA	-15	NA	89959780	89902763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.290	chr3	-	3779	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-9	-245	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	311.439553787353	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3538	False	NA	-4	True	AATATA	-14	NA	89959791	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.292	chr3	-	4671	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	-245	intron_retention	FALSE	canonical	1	3	junction_1	233.484154666028	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3536	False	NA	-4	True	AATATA	-14	NA	89959793	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.293	chr3	-	3794	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-245	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	292.852570857569	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3552	False	NA	-4	True	AATATA	-14	NA	89959777	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.295	chr3	-	3882	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	287.205901039371	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3557	False	NA	-4	True	AATATA	-14	NA	89959772	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.296	chr3	-	3879	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-5	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	277.185793802125	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3542	False	NA	-4	True	AATATA	-14	NA	89959787	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.299	chr3	-	3911	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	304.007325703893	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3543	False	NA	-4	True	AATATA	-14	NA	89959786	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.3	chr3	-	5979	33	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-1	intron_retention	FALSE	canonical	3	85	junction_7	411.961190479076	1745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGTTTTGTCAAGGT	8121	False	NA	NA	False	AATAAA	-25	NA	89955208	89902753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.300	chr3	-	3895	30	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-11	-245	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	350.323271804962	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3536	False	NA	-4	True	AATATA	-14	NA	89959793	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.301	chr3	-	3850	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-1	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3506	False	NA	-4	True	AATATA	-14	NA	89959823	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.303	chr3	-	3812	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-4	-245	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	228.423841363276	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3543	False	NA	-4	True	AATATA	-14	NA	89959786	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.304	chr3	-	3777	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-47	245	6	-245	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3513	False	NA	-4	True	AATATA	-14	NA	89959816	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.305	chr3	-	3827	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-245	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	318.674716223213	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3552	False	NA	-4	True	AATATA	-14	NA	89959777	89907844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.307	chr3	-	5067	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-246	intron_retention	FALSE	canonical	3	204	junction_22	208.919851708424	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTAAGTCTCCTCCTTT	3542	False	NA	-5	True	AATATA	-13	NA	89959787	89907845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.309	chr3	-	3901	30	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	2	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	357.62543262393	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTAAGTCTCCTCCTTT	3552	False	NA	-5	True	AATATA	-13	NA	89959777	89907845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909216_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959761
ES.21942.31	chr3	-	1085	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	661.327137907808	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7210	False	NA	NA	False	AATAAA	-15	NA	89905984	89902763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905288_89905834
ES.21942.310	chr3	-	2552	19	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	4	-246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	307.668833506274	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTAAGTCTCCTCCTTT	3524	False	NA	-5	True	AATATA	-13	NA	89959805	89907845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928615_89951016_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.313	chr3	-	3759	28	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-8	-246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.92032573692	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTAAGTCTCCTCCTTT	3539	False	NA	-5	True	AATATA	-13	NA	89959790	89907845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908308_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.316	chr3	-	3737	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	4	-247	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	278.999077430555	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTAAGTCTCCTCCTT	3524	False	NA	-6	True	AATATA	-12	NA	89959805	89907846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.317	chr3	-	3755	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-9	-247	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	269.861470050379	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTAAGTCTCCTCCTT	3538	False	NA	-6	True	AATATA	-12	NA	89959791	89907846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.318	chr3	-	3814	29	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	2	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	265.912570026238	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCTAAGTCTCCTCCT	3509	False	NA	-7	True	AATATA	-11	NA	89959820	89907847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909161_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.32	chr3	-	4420	34	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	418	0	multi-exon	FALSE	canonical	0	0	junction_7	441.481698364516	1745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	8141	False	NA	NA	False	AATAAA	-15	NA	89955188	89902763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89905963_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.321	chr3	-	3778	28	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	398	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	308.295713420703	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCTAAGTCTCCTCCT	8121	False	NA	-7	True	AATATA	-11	NA	89955208	89907847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.322	chr3	-	3823	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	16	-248	combination_of_known_junctions	FALSE	canonical	3	117	junction_28	291.091200029637	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCTAAGTCTCCTCCT	3956	False	NA	-7	True	AATATA	-11	NA	89959373	89907847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.323	chr3	-	3913	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	48	-249	combination_of_known_junctions	FALSE	canonical	3	117	junction_26	285.559774154877	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	3739	False	NA	-8	True	AATATA	-10	NA	89959590	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.324	chr3	-	2181	5	ISM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	41994	249	5825	-249	intron_retention	FALSE	canonical	3	275	junction_1	278.240004312823	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	NA	False	NA	-8	True	AATATA	-10	NA	89917775	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416
ES.21942.325	chr3	-	3956	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-11	-249	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	362.919254457032	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	3536	False	NA	-8	True	AATATA	-10	NA	89959793	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.328	chr3	-	3762	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-249	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	300.359418898862	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	3548	False	NA	-8	True	AATATA	-10	NA	89959781	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.33	chr3	-	4161	34	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_5	475.098501216943	1746	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	3548	False	NA	NA	False	AATAAA	-15	NA	89959781	89902763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904885_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.330	chr3	-	1127	7	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-5522	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	378.277565640188	1389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	NA	False	NA	-8	True	AATATA	-10	NA	89916615	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89908646_89908702_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416
ES.21942.331	chr3	-	2593	20	NNC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	4	-249	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	337.151675181308	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	3524	False	NA	-8	True	AATATA	-10	NA	89959805	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928567_89946238_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.335	chr3	-	3903	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	16	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	342.40671863938	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCTAAGTCTCCTCC	3600	False	NA	-8	True	AATATA	-10	NA	89959729	89907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959611
ES.21942.337	chr3	-	3937	30	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	331.472224944461	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGCCCTAAGTCTCCT	3552	False	NA	-10	True	AATATA	-8	NA	89959777	89907850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89908646_89908721_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.338	chr3	-	3816	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-253	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	266.318341808583	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACAGCCCTAAGTCTC	3550	False	NA	-12	True	AATATA	-6	NA	89959779	89907852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.339	chr3	-	5507	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	-1795	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTCTAGTAGGATG	3552	False	NA	NA	False	ATTAAA	-18	NA	89959777	89911500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.34	chr3	-	884	7	NNC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	691.075831986299	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGGTCTTAGTCTTGGT	7250	False	NA	NA	False	AATAAA	-14	NA	89905944	89902764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905227_89905311_89905834
ES.21942.340	chr3	-	4224	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	26	579	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	254.474284751918	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTACCACCTACA	3420	False	NA	NA	False	AGTAAA	-19	NA	89959909	89912721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.341	chr3	-	3695	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	26	-227	13	1	multi-exon	FALSE	canonical	3	204	junction_21	230.048746138726	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCTTTTATGTCT	3533	False	NA	NA	False	AATAAA	-19	NA	89959796	89913299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.342	chr3	-	3600	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	30	-1	16	1	multi-exon	FALSE	canonical	3	158	junction_17	264.856079891619	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCTTTTATGTCT	3600	False	NA	NA	False	AATAAA	-19	NA	89959729	89913299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.343	chr3	-	3685	26	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-1291	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	254.474284751918	1403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTATGCTTTTATGT	2103	False	NA	NA	False	AATAAA	-17	NA	89961226	89913301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89961166
ES.21942.344	chr3	-	3727	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTATGCTTTTATGT	3531	False	NA	NA	False	AATAAA	-17	NA	89959798	89913301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.345	chr3	-	3674	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	278.475420818427	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTATGCTTTTATGT	3405	False	NA	NA	False	AATAAA	-17	NA	89959924	89913301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.346	chr3	-	3763	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	204	junction_21	282.581811162714	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCTATGCTTTTATG	3542	False	NA	NA	False	AATAAA	-16	NA	89959787	89913302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.347	chr3	-	3700	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	204	junction_21	256.503018305828	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCTATGCTTTTATG	3540	False	NA	NA	False	AATAAA	-16	NA	89959789	89913302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.348	chr3	-	3688	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCTATGCTTTTATG	3504	False	NA	NA	False	AATAAA	-16	NA	89959825	89913302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.349	chr3	-	3647	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_21	278.879483648403	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCTATGCTTTTATG	3539	False	NA	NA	False	AATAAA	-16	NA	89959790	89913302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.35	chr3	-	1336	6	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	-55	intron_retention	FALSE	canonical	3	70	junction_5	718.003509740725	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATGCCAGTCTGTCAT	7190	False	NA	NA	False	NA	NA	NA	89906004	89902818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905411_89905834
ES.21942.350	chr3	-	3692	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTCCTATGCTTTTAT	3514	False	NA	NA	False	AATAAA	-15	NA	89959815	89913303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.351	chr3	-	3658	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-3	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	332.054848481392	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAACAACAAA	3517	False	NA	NA	False	AAAACA	-42	NA	89959812	89913324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926455_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945762_89946156_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.353	chr3	-	3646	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	10	-24	combination_of_known_junctions	FALSE	canonical	3	117	junction_25	237.934525447653	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAACAACAAA	3950	False	NA	NA	False	AAAACA	-42	NA	89959379	89913324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.355	chr3	-	3698	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	-24	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	245.100808648197	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAAAACAACAAA	3552	False	NA	NA	False	AAAACA	-42	NA	89959777	89913324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.356	chr3	-	3498	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-8	3	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTTCTTTCCGTGCAT	3539	False	NA	0	True	AATAAA	-23	NA	89959790	89913522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.357	chr3	-	3493	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-29	2	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3478	False	NA	-1	True	AATAAA	-22	NA	89959851	89913523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.359	chr3	-	3443	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	28	junction_25	250.424439701879	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3678	False	NA	-1	True	AATAAA	-22	NA	89959651	89913523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959611
ES.21942.36	chr3	-	4795	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-7	553	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	277.185793802125	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTGAAAGAGAAGTTTC	3577	False	NA	NA	False	AGTAAA	-18	NA	89959752	89906893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.360	chr3	-	3510	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-31	2	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3476	False	NA	-1	True	AATAAA	-22	NA	89959853	89913523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.361	chr3	-	3486	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	117	junction_25	277.08036668086	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3944	False	NA	-1	True	AATAAA	-22	NA	89959385	89913523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.362	chr3	-	3541	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	204	junction_21	282.581811162714	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTTCTTTCCGTGCA	3543	False	NA	-1	True	AATAAA	-22	NA	89959786	89913523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.364	chr3	-	5096	25	ISM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	19	6079	6	0	5prime_fragment	FALSE	canonical	3	281	junction_24	179.92388436966	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3576	False	NA	-3	True	AATAAA	-20	NA	89959753	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.365	chr3	-	3507	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	245.100808648197	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3542	False	NA	-3	True	AATAAA	-20	NA	89959787	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.367	chr3	-	3461	26	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_21	281.774093912127	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3552	False	NA	-3	True	AATAAA	-20	NA	89959777	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.368	chr3	-	3470	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	25	-1	12	0	multi-exon	FALSE	canonical	3	204	junction_21	230.048746138726	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3532	False	NA	-3	True	AATAAA	-20	NA	89959797	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.369	chr3	-	3503	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_21	256.503018305828	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3514	False	NA	-3	True	AATAAA	-20	NA	89959815	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.37	chr3	-	4684	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	553	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	271.443411003526	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTGAAAGAGAAGTTTC	3548	False	NA	NA	False	AGTAAA	-18	NA	89959781	89906893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.371	chr3	-	3555	27	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	216	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	296.244434197335	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	4156	False	NA	-3	True	AATAAA	-20	NA	89959173	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959095
ES.21942.372	chr3	-	3400	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	234.13700879803	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3509	False	NA	-3	True	AATAAA	-20	NA	89959820	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.373	chr3	-	5074	25	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	289	junction_16	174.126550403882	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3548	False	NA	-3	True	AATAAA	-20	NA	89959781	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.374	chr3	-	3494	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_25	263.696844122185	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3916	False	NA	-3	True	AATAAA	-20	NA	89959413	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.375	chr3	-	3431	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	-27	225	-4	0	multi-exon	FALSE	canonical	3	158	junction_17	264.856079891619	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3543	False	NA	-3	True	AATAAA	-20	NA	89959786	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.377	chr3	-	3518	26	FSM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	-1	-1	-1	0	multi-exon	FALSE	canonical	3	204	junction_21	259.732465433184	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3549	False	NA	-3	True	AATAAA	-20	NA	89959780	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.378	chr3	-	3584	27	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	305.950734712316	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3552	False	NA	-3	True	AATAAA	-20	NA	89959777	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89914731_89914834_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.379	chr3	-	3427	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	312.552075661001	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3546	False	NA	-3	True	AATAAA	-20	NA	89959783	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925755_89926481_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.38	chr3	-	3959	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	551	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACGTGAAAGAGAAGTT	3542	False	NA	NA	False	AGTAAA	-16	NA	89959787	89906895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.380	chr3	-	3494	25	NIC	ENSMUSG00000042520.17	novel	3629	25	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_24	293.448293642452	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3565	False	NA	-3	True	AATAAA	-20	NA	89959764	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959611
ES.21942.381	chr3	-	3408	25	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_20	320.109462072481	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	3545	False	NA	-3	True	AATAAA	-20	NA	89959784	89913525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.385	chr3	-	3578	27	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_26	314.428052183643	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3546	False	NA	-4	True	AATAAA	-19	NA	89959783	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.387	chr3	-	3473	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	254.474284751918	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3366	False	NA	-4	True	AATAAA	-19	NA	89959963	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.388	chr3	-	3465	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	356.389674373431	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3552	False	NA	-4	True	AATAAA	-19	NA	89959777	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959761
ES.21942.39	chr3	-	2363	17	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	347.006101351259	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACGTGAAAGAGAAGTT	3536	False	NA	NA	False	AGTAAA	-16	NA	89959793	89906895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926502_89951016_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.390	chr3	-	5107	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_20	197.54472067526	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3532	False	NA	-4	True	AATAAA	-19	NA	89959797	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.391	chr3	-	3553	27	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_17	365.407887922816	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3538	False	NA	-4	True	AATAAA	-19	NA	89959791	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.392	chr3	-	3449	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	278.475420818427	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3405	False	NA	-4	True	AATAAA	-19	NA	89959924	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.393	chr3	-	3495	26	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	199	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_25	250.568135244687	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	4139	False	NA	-4	True	AATAAA	-19	NA	89959190	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959095
ES.21942.395	chr3	-	3491	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	420.095581504971	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3543	False	NA	-4	True	AATAAA	-19	NA	89959786	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926455_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89941371_89941485_89941961_89942004_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.396	chr3	-	3562	27	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_17	347.85387881396	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3548	False	NA	-4	True	AATAAA	-19	NA	89959781	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.397	chr3	-	3432	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	331.376001545073	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3552	False	NA	-4	True	AATAAA	-19	NA	89959777	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959761
ES.21942.398	chr3	-	4991	1	FSM	ENSMUSG00000077569.3	ENSMUST00000104381.3	136	1	-480	-4375	-480	4375	mono-exon	FALSE	NA	NA	NA	NA	NA	1369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	NA	False	NA	-4	True	AATAAA	-19	NA	89918517	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89913500_89918500
ES.21942.399	chr3	-	3480	26	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_17	357.000064985988	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3587	False	NA	-4	True	AATAAA	-19	NA	89959742	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.4	chr3	-	4429	35	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	1	0	multi-exon	FALSE	canonical	0	0	junction_7	415.786794288248	1746	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	3548	False	NA	NA	False	AATAAA	-19	NA	89959781	89902759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89905963_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.40	chr3	-	4082	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-2	551	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	317.747188044527	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACGTGAAAGAGAAGTT	3565	False	NA	NA	False	AGTAAA	-16	NA	89959764	89906895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.400	chr3	-	5119	25	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_20	262.067726085368	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3600	False	NA	-4	True	AATAAA	-19	NA	89959729	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.401	chr3	-	3511	27	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_17	344.027453923745	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3547	False	NA	-4	True	AATAAA	-19	NA	89959782	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.403	chr3	-	3413	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	310.033634304409	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3537	False	NA	-4	True	AATAAA	-19	NA	89959792	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.404	chr3	-	3445	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	338.0185225694	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3538	False	NA	-4	True	AATAAA	-19	NA	89959791	89913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.407	chr3	-	3413	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_21	278.879483648403	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACTCTGCGTTCTTTCCG	3548	False	NA	-5	True	AATAAA	-18	NA	89959781	89913527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.408	chr3	-	3475	27	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	304.441957235601	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTCTGCGTTCTTTCC	3533	False	NA	-6	True	AATAAA	-17	NA	89959796	89913528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938136_89938179_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.409	chr3	-	3474	26	NNC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	283.752387831363	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTCTGCGTTCTTTCC	3550	False	NA	-6	True	AATAAA	-17	NA	89959779	89913528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933906_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.410	chr3	-	3509	27	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	296.244434197335	1393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTCTGCGTTCTTTC	3532	False	NA	-7	True	AATAAA	-16	NA	89959797	89913529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959761
ES.21942.412	chr3	-	2673	20	ISM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	-16	9024	-3	0	5prime_fragment	FALSE	canonical	3	158	junction_12	260.790137552928	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGGCAAATGGTTTT	3554	False	NA	NA	False	AATAAA	-13	NA	89959775	89922324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.413	chr3	-	2647	20	NIC	ENSMUSG00000042520.17	novel	2681	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_19	283.934944365041	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGGCAAATGGTTTT	3941	False	NA	NA	False	AATAAA	-13	NA	89959388	89922324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.414	chr3	-	2298	16	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	2	12702	2	1325	5prime_fragment	FALSE	canonical	3	204	junction_11	286.605388799459	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGTCTCAAATACCT	3552	False	NA	NA	False	AATAAA	-18	NA	89959777	89926228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.415	chr3	-	1955	14	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	1	-452	combination_of_known_junctions	FALSE	canonical	3	158	junction_6	322.168888782589	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTCTTAAGCTCAGTT	3548	False	NA	NA	False	GATAAA	-19	NA	89959781	89928005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.416	chr3	-	1946	15	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	41	14570	7	-543	5prime_fragment	FALSE	canonical	3	204	junction_10	294.879601857837	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTTGTTGTGTGCTTT	3591	False	NA	NA	False	GATAAA	-14	NA	89959738	89928096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.417	chr3	-	3673	9	ISM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-4	28243	-4	-6498	5prime_fragment	FALSE	canonical	3	281	junction_8	277.424060555317	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTTCCCTATCTC	3543	False	NA	NA	False	ATTAAA	-21	NA	89959786	89935837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.418	chr3	-	3426	9	ISM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	1	28485	1	-6740	5prime_fragment	FALSE	canonical	3	281	junction_8	277.424060555317	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTGTTTTAAATTAGT	3548	False	NA	NA	False	AATAAA	-15	NA	89959781	89936079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.419	chr3	-	2078	1	NIC	ENSMUSG00000042520.17	novel	3385	27	NA	NA	4430	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAGAAAAAAGAAA	9413	False	NA	NA	False	NA	NA	NA	89951176	89949098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89949100_89951200
ES.21942.42	chr3	-	3490	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	12	6	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	260.888650107861	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTAATGTGCTAATAT	3532	False	NA	-3	True	AATAAA	-27	NA	89959797	89907440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.420	chr3	-	1635	1	NIC	ENSMUSG00000042520.17	novel	3385	27	NA	NA	13	-5921	mono-exon	FALSE	NA	NA	NA	NA	NA	953	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCTCTGGCTATTTT	3597	False	NA	NA	False	NA	NA	NA	89959732	89958097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89958100_89959700
ES.21942.421	chr3	-	2396	2	Antisense	novelGene_ENSMUSG00000118504.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCTAGAGTCCGTCAGA	334	False	NA	NA	False	NA	NA	NA	89962995	89960211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89960424_89960811
ES.21942.422	chr3	-	1511	6	Antisense	novelGene_ENSMUSG00000090005.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89966925	89960233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89960424_89960811_89960915_89963511_89963632_89963835_89963887_89965788_89965958_89966047
ES.21942.424	chr3	-	1601	5	Antisense	novelGene_ENSMUSG00000090005.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89966925	89960233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89960424_89960811_89960915_89963511_89963632_89963835_89963887_89965788
ES.21942.426	chr3	-	259	1	Intergenic	novelGene_18138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAACTCTAATA	NA	False	NA	NA	False	NA	NA	NA	89965433	89965174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_89965200_89965400
ES.21942.43	chr3	-	3496	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	271.629109474398	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCACCTTAATGTGCTA	3536	False	NA	-7	True	AATAAA	-23	NA	89959793	89907444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.44	chr3	-	4158	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	-28	-155	12	2	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCACCTTAATGTGCTA	3532	False	NA	-7	True	AATAAA	-23	NA	89959797	89907444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.45	chr3	-	3507	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	259.770316402684	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3476	False	NA	-9	True	AATAAA	-21	NA	89959853	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.46	chr3	-	3543	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_28	343.33988336662	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3929	False	NA	-9	True	AATAAA	-21	NA	89959400	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.48	chr3	-	3523	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	292.369428383101	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3576	False	NA	-9	True	AATAAA	-21	NA	89959753	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.49	chr3	-	3551	30	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	354.077619683875	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3540	False	NA	-9	True	AATAAA	-21	NA	89959789	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.5	chr3	-	6092	35	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	0	intron_retention	FALSE	canonical	3	137	junction_7	422.9714870919	1746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	3548	False	NA	NA	False	AATAAA	-19	NA	89959781	89902759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.50	chr3	-	4259	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.541526273147	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3545	False	NA	-9	True	AATAAA	-21	NA	89959784	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.51	chr3	-	3407	27	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	288.439035019667	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3548	False	NA	-9	True	AATAAA	-21	NA	89959781	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.52	chr3	-	3427	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	277.248166726781	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3514	False	NA	-9	True	AATAAA	-21	NA	89959815	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.53	chr3	-	5086	2	FSM	ENSMUSG00000042520.17	ENSMUST00000200301.2	620	2	-2207	-2259	-2207	0	multi-exon	FALSE	canonical	3	574	junction_1	0	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	NA	False	NA	-9	True	AATAAA	-21	NA	89913300	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89909784_89910551
ES.21942.54	chr3	-	3437	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	290.188562465364	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3543	False	NA	-9	True	AATAAA	-21	NA	89959786	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.55	chr3	-	5019	27	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	0	intron_retention	FALSE	canonical	3	158	junction_19	266.508048547935	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3551	False	NA	-9	True	AATAAA	-21	NA	89959778	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.56	chr3	-	4206	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3533	False	NA	-9	True	AATAAA	-21	NA	89959796	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.57	chr3	-	4202	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_2	264.200265937152	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3548	False	NA	-9	True	AATAAA	-21	NA	89959781	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.58	chr3	-	4223	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-2	-148	-2	0	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3545	False	NA	-9	True	AATAAA	-21	NA	89959784	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.6	chr3	-	4354	33	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	2681	21	NA	NA	398	0	multi-exon	FALSE	canonical	0	0	junction_7	422.222616045138	1745	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	8121	False	NA	NA	False	AATAAA	-19	NA	89955208	89902759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905305_89905834_89905963_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.60	chr3	-	3468	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	249.895731342514	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3547	False	NA	-9	True	AATAAA	-21	NA	89959782	89907446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.61	chr3	-	3427	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	117	junction_27	311.371874844926	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3938	False	NA	-11	True	AATAAA	-19	NA	89959391	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.62	chr3	-	4127	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	271.443411003526	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3550	False	NA	-11	True	AATAAA	-19	NA	89959779	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.63	chr3	-	3429	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	321.313153576351	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3386	False	NA	-11	True	AATAAA	-19	NA	89959943	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959890
ES.21942.64	chr3	-	4222	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	117	junction_28	272.721516404929	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3941	False	NA	-11	True	AATAAA	-19	NA	89959388	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
ES.21942.65	chr3	-	3431	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	246.854055170629	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3532	False	NA	-11	True	AATAAA	-19	NA	89959797	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.67	chr3	-	3452	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	298.123339202467	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3552	False	NA	-11	True	AATAAA	-19	NA	89959777	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.68	chr3	-	3442	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3506	False	NA	-11	True	AATAAA	-19	NA	89959823	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.69	chr3	-	4186	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	261.982517558277	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.7	chr3	-	2932	8	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	1139	7	NA	NA	-2182	0	intron_retention	FALSE	canonical	0	0	junction_7	640.024744419611	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	4925	False	NA	NA	False	AATAAA	-19	NA	89908269	89902759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89907561_89908025
ES.21942.70	chr3	-	3561	29	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	332.344562409655	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.71	chr3	-	3419	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	28	junction_27	276.492140897444	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3679	False	NA	-11	True	AATAAA	-19	NA	89959650	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959611
ES.21942.74	chr3	-	4186	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	398	-2	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.015683817924	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.76	chr3	-	4309	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	322.542282863339	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3536	False	NA	-11	True	AATAAA	-19	NA	89959793	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.77	chr3	-	4171	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	239.415239833374	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.78	chr3	-	2899	17	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-1804	-2	intron_retention	FALSE	canonical	3	137	junction_1	236.798891137079	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	NA	False	NA	-11	True	AATAAA	-19	NA	89932541	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369
ES.21942.79	chr3	-	3588	30	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_29	318.43677704535	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3552	False	NA	-11	True	AATAAA	-19	NA	89959777	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
ES.21942.8	chr3	-	6066	35	Fusion	ENSMUSG00000027944.14_ENSMUSG00000042520.17	novel	3509	29	NA	NA	-5	0	intron_retention	FALSE	canonical	3	137	junction_7	429.694423489361	1746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	3542	False	NA	NA	False	AATAAA	-19	NA	89959787	89902759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.80	chr3	-	3466	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	271.692174629859	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3545	False	NA	-11	True	AATAAA	-19	NA	89959784	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909188_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.81	chr3	-	3556	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	292.36242840149	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909216_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.84	chr3	-	3493	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	320.775761495842	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909188_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.85	chr3	-	3560	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	362.702983281958	1412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928170_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935403_89935498_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.86	chr3	-	4117	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	278.999077430555	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3542	False	NA	-11	True	AATAAA	-19	NA	89959787	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.88	chr3	-	2966	24	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-41	-2	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	309.663302731533	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	NA	False	NA	-11	True	AATAAA	-19	NA	89946204	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121
ES.21942.89	chr3	-	4075	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	140	junction_2	278.647695955912	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3548	False	NA	-11	True	AATAAA	-19	NA	89959781	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.9	chr3	-	1199	7	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	656.238629531125	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTAGTCTTGGTTTT	7221	False	NA	NA	False	AATAAA	-17	NA	89905973	89902761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
ES.21942.91	chr3	-	2353	20	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	358.981878260822	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3543	False	NA	-11	True	AATAAA	-19	NA	89959786	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928664_89951020_89951118_89952160_89952239_89955076_89955207_89959696
ES.21942.93	chr3	-	5512	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	2	-2	intron_retention	FALSE	canonical	3	204	junction_22	236.743941394457	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3509	False	NA	-11	True	AATAAA	-19	NA	89959820	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.94	chr3	-	3463	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	346.132557843742	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909188_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922547_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21942.96	chr3	-	3493	29	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	329.28804422789	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3550	False	NA	-11	True	AATAAA	-19	NA	89959779	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930933_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.97	chr3	-	3418	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	279.905588629369	1413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	3509	False	NA	-11	True	AATAAA	-19	NA	89959820	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ES.21942.99	chr3	-	3646	28	NNC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	398	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	317.517142533233	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	8121	False	NA	-11	True	AATAAA	-19	NA	89955208	89907448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_89907561_89908025_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ES.21943.1	chr3	+	2241	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	-9	-2	-9	1	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGCTTGACTTTGTTAAA	NA	False	NA	20	True	AATAAA	-23	NA	89986837	90008210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.10	chr3	+	1096	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	86	1048	-28	-1043	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCAGTGTCTTCAATGCA	NA	False	NA	NA	False	GGGGCT	-40	NA	89986932	90007160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.11	chr3	+	1173	8	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-26	-4	combination_of_known_junctions	FALSE	canonical	1	12	junction_7	1188.46812737907	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACGTTGTAACTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	89986934	90006086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90005681
ES.21943.12	chr3	+	3455	7	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	3249	junction_3	142.894677608681	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGGCTTGACTTTGT	NA	False	NA	16	True	AATAAA	-19	NA	89986939	90008206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89997167_89997316_89997387_90006834
ES.21943.14	chr3	+	3768	6	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-12	-331	intron_retention	FALSE	canonical	3	3249	junction_3	145.53267674306	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986948	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89997167_89997316_89997387_90006834
ES.21943.15	chr3	+	1868	8	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	130	junction_7	1147.46215090307	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCACGGCCTCTTGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	89986950	89999435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319
ES.21943.16	chr3	+	2166	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1194.53445803316	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGATCAGACCGGCTTGAC	NA	False	NA	11	True	AATAAA	-14	NA	89986951	90008201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995832_89997103_89997167_89997316_89997387_90006834
ES.21943.17	chr3	+	1027	9	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	1	9	junction_8	1441.97251512468	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCACGGCCTCTTGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	89986952	89999435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_89999237
ES.21943.18	chr3	+	2190	9	NNC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1584.35404818494	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	False	NA	12	True	AATAAA	-15	NA	89986953	90008202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993758_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ES.21943.19	chr3	+	1362	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	108	760	-6	-755	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTTTCAGCTTTGGTG	NA	False	NA	NA	False	AAAACA	-19	NA	89986954	90007448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.2	chr3	+	1932	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	0	298	0	-293	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTTTGAAGTTTTGT	NA	False	NA	8	True	TTTAAA	-5	NA	89986846	90007910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.23	chr3	+	1859	9	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	0	-331	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	1429.67163515788	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986960	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ES.21943.24	chr3	+	1939	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	136	junction_1	1120.09974045682	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGATCAGACCGGCTTGA	NA	False	NA	10	True	AATAAA	-13	NA	89986960	90008200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987002_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.27	chr3	+	1584	6	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-2	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1365.02404374429	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986969	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89995705_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.28	chr3	+	2051	9	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1123.46678160727	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGACCGGCTTGACTTT	NA	False	NA	14	True	AATAAA	-17	NA	89986969	90008204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834_90007864_90007915
ES.21943.29	chr3	+	2417	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	125	-312	0	311	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGTTCAGACCCTCA	NA	False	NA	NA	False	NA	NA	NA	89986971	90008520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.31	chr3	+	2972	7	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	3249	junction_2	138.893744359572	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGATCAGACCGGCTTGA	NA	False	NA	10	True	AATAAA	-13	NA	89986971	90008200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.32	chr3	+	1854	9	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	1	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1456.07459780569	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986972	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994381_89994468_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.33	chr3	+	1775	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	1	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1167.56215584229	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986972	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993745_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.34	chr3	+	4074	6	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	3249	junction_3	145.53267674306	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	False	NA	12	True	AATAAA	-15	NA	89986972	90008202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89997167_89997316_89997387_90006834
ES.21943.36	chr3	+	2029	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.56215584229	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	False	NA	12	True	AATAAA	-15	NA	89986972	90008202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993821_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.39	chr3	+	2030	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1179.69340534405	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGACCGGCTTGACTTTG	NA	False	NA	15	True	AATAAA	-18	NA	89986981	90008205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993825_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.4	chr3	+	2279	9	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	1429.67163515788	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGGCTTGACTTTGT	NA	False	NA	16	True	AATAAA	-19	NA	89986874	90008206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ES.21943.41	chr3	+	1756	8	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	13	-331	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	1539.62693599483	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986984	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_90006834
ES.21943.42	chr3	+	2083	8	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	1539.62693599483	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGACCGGCTTGACTTT	NA	False	NA	14	True	AATAAA	-17	NA	89986989	90008204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_90006834
ES.21943.44	chr3	+	2946	9	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1469.04762941846	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89986993	90008208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90005681_90006545_90006834
ES.21943.45	chr3	+	1737	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	24	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1195.03110710089	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89986995	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994884_89994992_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.46	chr3	+	3446	15	Fusion	ENSMUSG00000027940.19_ENSMUSG00000027939.12	novel	2230	8	NA	NA	-22	26194	multi-exon	FALSE	canonical	0	0	junction_8	1689.54927119511	1520	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGATAAAAAAAAAAAAAA	NA	False	NA	-16	True	AATAAA	-7	NA	89986999	90034403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834_90008235_90014205_90014343_90022361_90022494_90025839_90025934_90027173_90027325_90029993_90030127_90031513_90031893_90034086
ES.21943.47	chr3	+	2733	7	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-22	0	intron_retention	FALSE	canonical	3	3249	junction_3	144.897281624681	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89986999	90008208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.48	chr3	+	3017	10	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1580.29826845566	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89987001	90008208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90005681_90006545_90006834
ES.21943.5	chr3	+	2184	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1192.63932998563	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGGCTTGACTTTGT	NA	False	NA	16	True	AATAAA	-19	NA	89986877	90008206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006847
ES.21943.51	chr3	+	1494	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-18	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1167.56215584229	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89987003	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987014_89993838_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.52	chr3	+	1614	9	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	-9	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1123.46678160727	1489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	-30	True	NA	NA	NA	89987012	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834_90007090_90007203
ES.21943.53	chr3	+	2194	8	NNC	ENSMUSG00000027940.19	novel	427	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.56215584229	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89987722	90008208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89988011_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.54	chr3	+	1906	7	ISM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	6904	2	73	-2	3prime_fragment	FALSE	canonical	3	3249	junction_2	90.417549918881	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGGCTTGACTTTGT	NA	False	NA	16	True	AATAAA	-19	NA	89993750	90008206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21943.55	chr3	+	4345	1	NIC	ENSMUSG00000027940.19	novel	2233	9	NA	NA	6492	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1485	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	3016	False	NA	12	True	AATAAA	-15	NA	90003857	90008202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90003900_90008200
ES.21943.56	chr3	+	2624	1	NIC	ENSMUSG00000027940.19	novel	2233	9	NA	NA	7883	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	1481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	4407	False	NA	-30	True	NA	NA	NA	90005248	90007872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90005200_90007900
ES.21943.8	chr3	+	1318	2	NNC	ENSMUSG00000027940.19	novel	655	4	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGACCGGCTTGACTTT	NA	False	NA	14	True	AATAAA	-17	NA	89986885	90008204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89986978_90006978
ES.21943.9	chr3	+	2171	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1167.56215584229	1493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	False	NA	12	True	AATAAA	-15	NA	89986892	90008202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_89987164_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ES.21944.1	chr3	-	4207	2	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9566	False	NA	NA	False	NA	NA	NA	89999731	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89997165_89997314
ES.21944.10	chr3	-	3555	2	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9570	False	NA	NA	False	NA	NA	NA	89999727	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89998395_89999192
ES.21944.11	chr3	-	1843	4	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9479	False	NA	NA	False	NA	NA	NA	90008132	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89995782_89997101_89997165_89997314_89997387_90006831
ES.21944.17	chr3	-	157	1	Intergenic	novelGene_18139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAATCAAAAA	8683	False	NA	NA	False	NA	NA	NA	90000614	90000457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90000500_90000600
ES.21944.3	chr3	-	2484	4	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9482	False	NA	NA	False	NA	NA	NA	90008129	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89996429_89997101_89997165_89997314_89997384_90006831
ES.21944.5	chr3	-	4355	1	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9568	False	NA	NA	False	NA	NA	NA	89999729	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89995400_89999700
ES.21944.6	chr3	-	2884	3	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9569	False	NA	NA	False	NA	NA	NA	89999728	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89995782_89997101_89997165_89997314
ES.21944.7	chr3	-	3270	3	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9570	False	NA	NA	False	NA	NA	NA	89999727	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89997165_89997314_89997385_89998317
ES.21944.8	chr3	-	3505	3	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9984	False	NA	NA	False	NA	NA	NA	90008477	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89997165_89997314_89997384_90006831
ES.21944.9	chr3	-	4205	2	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGGCCCGAAATCGG	9568	False	NA	NA	False	NA	NA	NA	89999729	89995374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_89997172_89997321
ES.21945.1	chr3	-	157	1	Intergenic	novelGene_18140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	90024965	90024808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90024800_90025000
ES.21946.1	chr3	+	2627	19	ISM	ENSMUSG00000027939.12	ENSMUST00000029548.9	5681	40	32788	22379	32786	-22379	internal_fragment	FALSE	canonical	0	0	junction_13	1.60727512683216	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTTAGTACTAAGAGTC	NA	False	NA	NA	False	AATAAA	-19	NA	90044226	90096945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90044309_90051465_90051665_90058409_90058556_90061775_90061998_90067136_90067311_90075040_90075234_90076600_90076690_90077296_90077402_90077865_90077968_90079355_90079485_90081636_90081765_90083144_90083278_90087456_90087520_90088677_90088858_90089189_90089271_90089786_90089919_90092731_90092891_90093338_90093431_90096727
ES.21947.1	chr3	-	400	1	Intergenic	novelGene_18141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACACACTTACAGC	NA	False	NA	NA	False	NA	NA	NA	90062649	90062249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90062200_90062600
ES.21947.2	chr3	-	176	1	Intergenic	novelGene_18142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90062649	90062473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90062500_90062600
ES.21948.1	chr3	-	196	1	Intergenic	novelGene_18143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	90074780	90074584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90074600_90074800
ES.21949.1	chr3	-	176	1	Intergenic	novelGene_18144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTCTGGAACCC	2909	False	NA	NA	False	NA	NA	NA	90084553	90084377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90084400_90084600
ES.2195.1	chr1	+	187	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTAAAATGTA	5615	False	NA	NA	False	NA	NA	NA	191042448	191042635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191042400_191042600
ES.21950.1	chr3	+	3698	1	NIC	ENSMUSG00000027939.12	novel	5681	40	NA	NA	88113	-16073	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGATGAAGCAAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	90099553	90103251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90099600_90103300
ES.21951.1	chr3	-	2104	3	NNC	ENSMUSG00000090733.7	novel	458	5	NA	NA	0	2015	intron_retention	TRUE	non_canonical	0	0	junction_1	10413.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTCTCCAAAGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	90120954	90117813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90117879_90118767_90120352_90120499
ES.21951.2	chr3	-	499	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	3	-157	0	8	multi-exon	FALSE	canonical	3	13930	junction_3	2970.01597451746	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACTGGTGATAGTGTA	NA	False	NA	NA	False	TATAAA	-15	NA	90120955	90119820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ES.21951.3	chr3	-	360	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	-12	-3	-12	-1	multi-exon	FALSE	canonical	3	13930	junction_3	2970.01597451746	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTCTTGTTTAACTG	NA	False	NA	-3	True	AATAAA	-18	NA	90120970	90119974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ES.21951.4	chr3	-	340	4	NNC	ENSMUSG00000090733.7	novel	458	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6932.13060080858	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTCTTGTTTAACT	NA	False	NA	-4	True	AATAAA	-17	NA	90120954	90119975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90120061_90120240_90120345_90120495_90120609_90120916
ES.21951.6	chr3	-	572	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	-25	-1	0	1	multi-exon	FALSE	canonical	3	63	junction_3	8789.54951443285	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGTCTTGTTTAAC	NA	False	NA	-5	True	AATAAA	-16	NA	90120955	90119976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
ES.21952.1	chr3	+	956	8	NNC	ENSMUSG00000027935.15	novel	1415	8	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	7.54036755451237	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGTCCCATTTGCATT	NA	False	NA	3	True	ATTAAA	-15	NA	90121002	90133273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90121091_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ES.21952.2	chr3	+	1338	1	FSM	ENSMUSG00000027935.15	ENSMUST00000198809.2	762	1	-6	-570	-6	570	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATTCATTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	90121010	90122348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90121000_90122300
ES.21952.3	chr3	+	978	8	FSM	ENSMUSG00000027935.15	ENSMUST00000107373.8	1415	8	16	421	1	-5	multi-exon	FALSE	canonical	2	6	junction_1	8.56666534317997	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAATGTCCCATTTGCA	NA	False	NA	1	True	ATTAAA	-13	NA	90121017	90133271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90121130_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ES.21952.4	chr3	+	1130	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCCATTTGCATTACT	NA	False	NA	6	True	ATTAAA	-18	NA	90128070	90133276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ES.21952.5	chr3	+	1463	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	60	-416	60	0	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCAAGTTGATTTCT	NA	False	NA	NA	False	AATACA	-17	NA	90128153	90133692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ES.21953.1	chr3	+	2874	2	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	-10	2	intron_retention	FALSE	canonical	3	314	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTGTAATCATTTGGC	NA	False	NA	6	True	AATAAA	-16	NA	90138893	90143147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90141310_90142689
ES.21953.10	chr3	+	2609	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	62	0	intron_retention	FALSE	canonical	3	314	junction_2	7	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90139002	90143145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90139348_90139501_90141310_90142689
ES.21953.2	chr3	+	1110	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	-9	0	-9	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138894	90143145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ES.21953.3	chr3	+	1453	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	0	2	intron_retention	FALSE	canonical	3	314	junction_2	23	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTGTAATCATTTGGC	NA	False	NA	6	True	AATAAA	-16	NA	90138903	90143147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90139819_90141229_90141310_90142689
ES.21953.4	chr3	+	4079	2	ISM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	9	0	-6	0	intron_retention	FALSE	canonical	3	328	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138912	90143145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90139348_90139501
ES.21953.5	chr3	+	986	5	NNC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	143.332437012701	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138916	90143145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90139246_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ES.21953.6	chr3	+	1274	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	8	0	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138926	90143145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
ES.21953.7	chr3	+	914	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	24	163	9	131	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGTAAAATAGAGC	NA	False	NA	NA	False	NA	NA	NA	90138927	90142982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ES.21953.8	chr3	+	4194	1	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	9	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTTAGTGTAATCATT	NA	False	NA	2	True	AATAAA	-12	NA	90138949	90143143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90138900_90143100
ES.21953.9	chr3	+	1160	3	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	19	-1	intron_retention	FALSE	canonical	2	3	junction_2	162.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGTGTAATCATTT	NA	False	NA	3	True	AATAAA	-13	NA	90138959	90143144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90139348_90139501_90139819_90142689
ES.21954.1	chr3	-	2122	10	FSM	ENSMUSG00000027938.12	ENSMUST00000107369.2	1404	10	48	-766	48	696	multi-exon	TRUE	canonical	2	4	junction_7	1.89215404065849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGTTTATTCATTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	90150402	90144110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90145229_90145356_90145454_90145618_90145704_90145789_90145859_90145951_90146059_90146190_90146287_90149238_90149361_90149517_90149753_90150028_90150144_90150324
ES.21954.2	chr3	-	1356	10	FSM	ENSMUSG00000027938.12	ENSMUST00000107369.2	1404	10	47	1	47	-1	multi-exon	FALSE	canonical	2	4	junction_7	1.89215404065849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCAAGTTTTTCACTAT	NA	False	NA	NA	False	AATAAA	-18	NA	90150403	90144877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90145229_90145356_90145454_90145618_90145704_90145789_90145859_90145951_90146059_90146190_90146287_90149238_90149361_90149517_90149753_90150028_90150144_90150324
ES.21955.1	chr3	+	2348	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	19	-3	19	3	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGTATCTGATTCTGTG	NA	False	NA	2	True	AATAAA	-19	NA	90155497	90160922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ES.21955.2	chr3	+	2322	4	NNC	ENSMUSG00000052310.10	novel	2364	4	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	66.3341708489842	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTATGGTATCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	90155533	90160918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90155567_90156238_90156471_90156632_90156764_90158992
ES.21956.1	chr3	+	2661	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	non_canonical	3	69	junction_12	16.2899032147389	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161555	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.10	chr3	+	2276	10	FSM	ENSMUSG00000027936.19	ENSMUST00000136970.8	2214	10	-60	-2	-15	2	multi-exon	FALSE	canonical	3	9	junction_1	29.0814097846327	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGCTTGGCTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	90161587	90171429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.11	chr3	+	2485	13	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.1089573882348	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161587	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90165763_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.12	chr3	+	2605	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.1612533719806	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161590	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164704_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.13	chr3	+	2675	15	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	3	17	junction_12	28.5772315535516	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161600	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.14	chr3	+	2332	11	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.7456119829293	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161601	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.15	chr3	+	2069	11	NNC	ENSMUSG00000027936.19	novel	2214	10	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.4474365914226	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161601	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168258_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.16	chr3	+	2843	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	1	0	intron_retention	FALSE	non_canonical	3	17	junction_11	29.57429717262	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161603	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.17	chr3	+	2246	10	NNC	ENSMUSG00000027936.19	novel	2214	10	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.4344881134537	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGCTTGGCTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	90161607	90171429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167125_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.18	chr3	+	2778	11	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	0	intron_retention	FALSE	non_canonical	3	14	junction_4	29.4081621323061	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161609	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166692_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.19	chr3	+	3301	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	0	intron_retention	FALSE	non_canonical	3	17	junction_11	29.6462376750242	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161609	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.2	chr3	+	4550	12	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-26	0	intron_retention	FALSE	canonical	3	17	junction_9	32.0693978894481	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161576	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90164526_90164601_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.20	chr3	+	4494	12	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	-3	intron_retention	FALSE	canonical	0	0	junction_11	37.7683237778927	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161609	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170801
ES.21956.21	chr3	+	3533	13	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	-3	intron_retention	FALSE	non_canonical	2	2	junction_10	33.6157825036594	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161609	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170143_90170288_90170477_90170665_90170786
ES.21956.22	chr3	+	2348	11	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.9963634359909	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAACCTTTTGTGTGCTT	NA	False	NA	NA	False	AATAAA	-8	NA	90161609	90171421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90164526_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.24	chr3	+	2418	12	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.9814006344727	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161609	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90164526_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.25	chr3	+	4354	11	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_6	33.1487556327534	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90161609	90171427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167307_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.26	chr3	+	2532	13	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	14	junction_4	27.0442025005155	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90161610	90171427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.27	chr3	+	3795	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	8	-3	intron_retention	FALSE	canonical	2	2	junction_11	32.3311270318238	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161610	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170143_90170288_90170477_90170665_90170786
ES.21956.28	chr3	+	6297	7	NIC	ENSMUSG00000027936.19	novel	2311	13	NA	NA	8	1	intron_retention	FALSE	canonical	3	17	junction_4	42.7333463338514	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGCTTGGCTATT	NA	False	NA	NA	False	AATAAA	-15	NA	90161610	90171428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90167135_90167260_90167678_90168003_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.29	chr3	+	4763	8	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	9	-1	intron_retention	FALSE	canonical	3	69	junction_6	19.5009157294142	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGCTTGGCTATTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	90161611	90171431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.3	chr3	+	2780	15	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_12	31.1808418417333	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGCTTGGCTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	90161577	90171429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170143_90170288_90170477_90170665_90170786
ES.21956.30	chr3	+	2619	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	5	junction_7	28.1111487917255	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161612	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167054_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.31	chr3	+	4587	10	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	12	-3	intron_retention	FALSE	canonical	3	69	junction_8	17.2762593116238	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161614	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90164526_90164601_90166800_90166889_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.32	chr3	+	4280	10	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-6	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	34.7118651219855	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161641	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164719_90165767_90165834_90166460_90166530_90166692_90167135_90167260_90167678_90168003_90170022_90170477_90170665_90170786
ES.21956.33	chr3	+	2475	13	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.1711786740032	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161666	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164713_90165763_90165834_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ES.21956.34	chr3	+	3253	12	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-94	0	intron_retention	FALSE	canonical	0	0	junction_10	28.5541388064008	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90164507	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170544_90170665_90170786
ES.21956.35	chr3	+	1548	8	NIC	ENSMUSG00000027936.19	novel	2311	13	NA	NA	616	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	42.7966239370369	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90166887	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.4	chr3	+	3756	14	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-22	0	intron_retention	FALSE	canonical	3	17	junction_11	29.6114882551754	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161580	90171432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.5	chr3	+	2625	14	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	3	14	junction_4	34.8818801404136	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161581	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ES.21956.6	chr3	+	7164	3	NIC	ENSMUSG00000027936.19	novel	2992	11	NA	NA	-19	0	intron_retention	FALSE	canonical	3	121	junction_2	3	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90161583	90171427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90161866_90164423_90170665_90170786
ES.21956.8	chr3	+	2217	13	NNC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	30.2457526862129	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	90161584	90171424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90161866_90164423_90164526_90164601_90164717_90165769_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90169757_90170022_90170477_90170665_90170786
ES.21957.1	chr3	+	5697	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	-54	4	-54	-4	multi-exon	TRUE	canonical	3	27	junction_1	11.4060845793856	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCTGTTCTCTG	NA	False	NA	28	True	AGTAAA	-22	NA	90172437	90187972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.10	chr3	+	5589	28	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	47	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	14.4934590989504	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCCTCCTGTTCTCT	NA	False	NA	27	True	AGTAAA	-21	NA	90172538	90187971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184192_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.12	chr3	+	6280	26	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	56	-21	intron_retention	FALSE	canonical	1	1	junction_7	14.8466292470715	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTTTTTTTTCTT	NA	False	NA	11	True	AGTAAA	-5	NA	90172547	90187955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177436_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90186851_90186926_90186992_90187083
ES.21957.13	chr3	+	6075	27	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	57	-12	intron_retention	FALSE	canonical	1	1	junction_6	14.5509205874002	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTCTGCCTCCT	NA	False	NA	20	True	AGTAAA	-14	NA	90172548	90187964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90172869_90174719_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177436_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.14	chr3	+	5669	27	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	57	-12	intron_retention	FALSE	canonical	3	27	junction_1	11.4868074573456	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTCTGCCTCCT	NA	False	NA	20	True	AGTAAA	-14	NA	90172548	90187964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186851_90186926_90186992_90187083
ES.21957.15	chr3	+	5062	28	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	275	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	14.4376052184718	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTAGTGTTGTATTCTA	NA	False	NA	NA	False	NA	NA	NA	90172766	90187663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186602_90186689_90186851_90186926_90186992_90187083
ES.21957.16	chr3	+	5199	28	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	356	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.5839417862487	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTCTGCCTCCT	NA	False	NA	20	True	AGTAAA	-14	NA	90172847	90187964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179010_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.17	chr3	+	9178	20	NIC	ENSMUSG00000042404.17	novel	5423	28	NA	NA	493	-6	intron_retention	FALSE	canonical	3	31	junction_4	11.7699556479911	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTGCCTCCTGTTCTC	NA	False	NA	26	True	AGTAAA	-20	NA	90172984	90187970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90179090_90179562_90179709_90180021_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90184576_90184727_90184851_90185041_90185437_90185617_90186851_90186926_90186992_90187083
ES.21957.18	chr3	+	6005	28	FSM	ENSMUSG00000042404.17	ENSMUST00000098914.10	5423	28	-589	7	-589	-7	multi-exon	FALSE	canonical	2	4	junction_1	13.5989993983561	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGCCTCCTGTTCT	NA	False	NA	25	True	AGTAAA	-19	NA	90173231	90187969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90173974_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.19	chr3	+	6515	26	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	212	-16	intron_retention	FALSE	canonical	0	0	junction_18	14.1847241777907	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTTTTCTTCTGCC	NA	False	NA	16	True	AGTAAA	-10	NA	90174032	90187960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184729_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.2	chr3	+	5773	27	NNC	ENSMUSG00000042404.17	novel	2551	16	NA	NA	-32	-6	intron_retention	FALSE	canonical	0	0	junction_1	14.2349266276534	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTGCCTCCTGTTCTC	NA	False	NA	26	True	AGTAAA	-20	NA	90172459	90187970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90172480_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.20	chr3	+	5193	27	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	13.866864852172	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTCTGCCTCCTGTT	NA	False	NA	23	True	AGTAAA	-17	NA	90174766	90187967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176561_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.21	chr3	+	7185	22	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	-591	-5	intron_retention	FALSE	canonical	3	31	junction_4	10.7595867710146	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCCTCCTGTTCTCT	NA	False	NA	27	True	AGTAAA	-21	NA	90175731	90187971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90180162_90180243_90180371_90181110_90181318_90181595_90182952_90183529_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.22	chr3	+	4662	25	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	-268	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.4529889257859	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGCCTCCTGTTCT	NA	False	NA	25	True	AGTAAA	-19	NA	90176054	90187969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90176125_90176294_90176457_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.23	chr3	+	4593	24	ISM	ENSMUSG00000042404.17	ENSMUST00000098914.10	5423	28	2472	16	-30	-16	3prime_fragment	FALSE	canonical	3	31	junction_2	10.5371787545747	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTTTTCTTCTGCC	NA	False	NA	16	True	AGTAAA	-10	NA	90176292	90187960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.24	chr3	+	2876	12	ISM	ENSMUSG00000042404.17	ENSMUST00000098914.10	5423	28	7695	12	-1253	-12	3prime_fragment	FALSE	canonical	3	38	junction_3	9.8080756067354	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTCTGCCTCCT	NA	False	NA	20	True	AGTAAA	-14	NA	90181515	90187964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.25	chr3	+	2925	7	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	-347	-4	intron_retention	FALSE	canonical	3	53	junction_3	8.17346655682615	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCTGTTCTCTG	NA	False	NA	28	True	AGTAAA	-22	NA	90184362	90187972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90184576_90184727_90184851_90185041_90185212_90185294_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.3	chr3	+	7514	27	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	31	junction_5	10.8305944041834	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCCTCCTGTTCTCT	NA	False	NA	27	True	AGTAAA	-21	NA	90172470	90187971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.4	chr3	+	8160	25	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	32	-9	intron_retention	FALSE	canonical	3	31	junction_5	11.1335797128427	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTCTGCCTCCTGTT	NA	False	NA	23	True	AGTAAA	-17	NA	90172523	90187967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90186851_90186926_90186992_90187083
ES.21957.5	chr3	+	7940	26	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	34	-14	intron_retention	FALSE	canonical	3	31	junction_4	10.7259684877404	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTCTTCTGCCTC	NA	False	NA	18	True	AGTAAA	-12	NA	90172525	90187962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.6	chr3	+	6069	28	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.2711350257979	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTGCCTCCTGTTCTC	NA	False	NA	26	True	AGTAAA	-20	NA	90172526	90187970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90177249_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.7	chr3	+	5607	28	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	40	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	14.4302874593378	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGCCTCCTGTTCT	NA	False	NA	25	True	AGTAAA	-19	NA	90172531	90187969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177436_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.8	chr3	+	5537	28	NNC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	40	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.5325895532106	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTCTTCTGCCTC	NA	False	NA	18	True	AGTAAA	-12	NA	90172531	90187962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90172869_90174719_90175060_90175549_90175747_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ES.21957.9	chr3	+	8042	26	NIC	ENSMUSG00000042404.17	novel	5647	28	NA	NA	46	-22	intron_retention	FALSE	canonical	3	31	junction_5	11.0289800072355	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGTCTTTTTTTTCT	NA	False	NA	10	True	AGTAAA	-4	NA	90172537	90187954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90186594_90186684_90186851_90186926_90186992_90187083
ES.21958.1	chr3	-	171	1	Intergenic	novelGene_18145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	90193954	90193783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90193800_90194000
ES.21959.1	chr3	+	5643	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	2	1793	2	-1793	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTATGTCATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	90200486	90268921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.10	chr3	+	6424	1	NIC	ENSMUSG00000042390.10	novel	2418	11	NA	NA	105	-42860	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	AAGAAA	-2	NA	90201494	90207918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90201500_90207900
ES.21959.11	chr3	+	6025	11	NNC	ENSMUSG00000042390.10	novel	1906	10	NA	NA	-16756	-1324	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.65507325278993	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	501	False	NA	NA	False	AATATA	-15	NA	90231579	90269390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90231738_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.12	chr3	+	158	1	FSM	ENSMUSG00000042390.10	ENSMUST00000205797.2	2443	1	1896	389	1269	-389	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1212	False	NA	NA	False	NA	NA	NA	90250231	90250389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90250200_90250400
ES.21959.13	chr3	+	2268	1	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	-3004	-1871	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAGAAAA	1367	False	NA	NA	False	NA	NA	NA	90255720	90257988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90255700_90258000
ES.21959.15	chr3	+	4217	1	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	6449	-1324	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	196	False	NA	NA	False	AATATA	-15	NA	90265173	90269390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90265200_90269400
ES.21959.2	chr3	+	2397	11	NNC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.00357051795725	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTGTTTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	90200490	90265677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90200732_90248962_90249302_90255871_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.3	chr3	+	6105	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	9	1324	3	-1324	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	NA	False	NA	NA	False	AATATA	-15	NA	90200493	90269390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.5	chr3	+	5669	12	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	18	-1798	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.02681456532513	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGTGTTATGTCATT	NA	False	NA	NA	False	NA	NA	NA	90200508	90268916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90200732_90231348_90231402_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.6	chr3	+	5624	11	NNC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	18	-1806	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.91375440697744	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATTGTGAAACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	90200508	90268908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90200732_90248946_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.7	chr3	+	2396	12	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	51	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.02681456532513	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGTGTGTTTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	90200541	90265676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90200732_90231348_90231402_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.8	chr3	+	5962	12	NIC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	22	-1324	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.02681456532513	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	NA	False	NA	NA	False	AATATA	-15	NA	90200689	90269390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90200732_90231348_90231402_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ES.21959.9	chr3	+	5910	11	NNC	ENSMUSG00000042390.10	novel	7438	11	NA	NA	27	-1324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.01498396291823	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTCAAAGCTTTCTT	NA	False	NA	NA	False	AATATA	-15	NA	90200694	90269390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262975_90263093_90263437_90263556_90265175
ES.2196.1	chr1	-	682	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	59	1	59	-1	multi-exon	FALSE	canonical	3	115	junction_1	10.5303793326209	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGTGTATGGTTCTT	NA	False	NA	-1	True	AATAAA	-18	NA	191050332	191038986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
ES.21960.1	chr3	-	178	1	Intergenic	novelGene_18146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	90215216	90215038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90215000_90215200
ES.21961.1	chr3	-	278	1	Antisense	novelGene_ENSMUSG00000108394.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAAAGGTCCCTT	NA	False	NA	NA	False	NA	NA	NA	90220997	90220719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_90220700_90221000
ES.21962.1	chr3	-	1652	1	Antisense	novelGene_ENSMUSG00000042390.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	8622	False	NA	NA	False	NA	NA	NA	90257773	90256121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_90256100_90257800
ES.21962.2	chr3	-	3371	5	Antisense	novelGene_ENSMUSG00000042390.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAATAAAAAAAAAAAAAAA	2700	False	NA	NA	False	NA	NA	NA	90263695	90256122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_90256792_90257691_90257824_90258708_90258882_90259120_90259435_90261612
ES.21962.3	chr3	-	171	1	Intergenic	novelGene_18147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAGAAATTCA	3017	False	NA	NA	False	NA	NA	NA	90263378	90263207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90263200_90263400
ES.21963.1	chr3	+	316	1	ISM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	69908	6	11668	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCCTGTGACTTGTG	3018	False	NA	5	True	AATAAA	-17	NA	90270392	90270708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90270400_90270700
ES.21964.1	chr3	-	226	1	Intergenic	novelGene_18148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	90278185	90277959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90278000_90278200
ES.21965.1	chr3	+	5484	2	Antisense	novelGene_ENSMUSG00000027933.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAAACAGAATTCTACTT	NA	False	NA	NA	False	NA	NA	NA	90322129	90327736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_90327074_90327196
ES.21966.1	chr3	-	5845	20	Fusion	ENSMUSG00000027933.12_ENSMUSG00000027932.15	novel	4337	30	NA	NA	137	11	intron_retention	FALSE	canonical	3	73	junction_6	62.124974570409	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGAGTCTGTGGGGCTG	NA	False	NA	-6	True	AATAAA	-25	NA	90307945	90292534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901
ES.21966.10	chr3	-	4291	30	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	50	3	intron_retention	FALSE	non_canonical	0	0	junction_24	44.1481669165634	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGACATCTCTGTTCGTC	NA	False	NA	0	True	AATGAA	-27	NA	90340786	90298691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318646_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.11	chr3	-	4350	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	-309	-3	1	3	multi-exon	FALSE	canonical	3	31	junction_1	39.1651914615801	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGACATCTCTGTTCGTC	NA	False	NA	0	True	AATGAA	-27	NA	90340919	90298691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.13	chr3	-	4938	29	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	59	1	intron_retention	FALSE	canonical	3	154	junction_20	21.6206864283411	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGACATCTCTGTTCG	NA	False	NA	-2	True	AATGAA	-25	NA	90340777	90298693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.14	chr3	-	4394	29	NNC	ENSMUSG00000027933.12	novel	4038	31	NA	NA	8634	-3	intron_retention	FALSE	canonical	0	0	junction_19	54.8853512853319	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGTTGACATCTCTG	NA	False	NA	-6	True	AATGAA	-21	NA	90331976	90298697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311370_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310
ES.21966.16	chr3	-	4555	31	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_29	56.8621041546027	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGAGTTGACATCTCTG	NA	False	NA	-6	True	AATGAA	-21	NA	90340916	90298697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90339592_90339726_90340110
ES.21966.17	chr3	-	4016	22	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-8133	1	intron_retention	FALSE	canonical	3	154	junction_19	24.2302822097416	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTGAGTTGACATC	NA	False	NA	-10	True	AATGAA	-17	NA	90318654	90298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507
ES.21966.18	chr3	-	4413	30	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	27	1	intron_retention	FALSE	canonical	1	1	junction_10	44.4356607121475	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTGAGTTGACATC	NA	False	NA	-10	True	AATGAA	-17	NA	90340893	90298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303857_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.19	chr3	-	3793	21	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-6836	1	intron_retention	FALSE	canonical	0	0	junction_12	52.19731793876	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTGAGTTGACATC	NA	False	NA	-10	True	AATGAA	-17	NA	90317357	90298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308475_90308711_90308767_90309149_90309280_90309614_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304
ES.21966.2	chr3	-	2313	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	-43	-11	-32	11	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGAGTCTGTGGGGCTG	NA	False	NA	-6	True	AATAAA	-25	NA	90297277	90292534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ES.21966.20	chr3	-	4486	31	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_21	66.7049973140444	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340817	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315773_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90339592_90339726_90340110
ES.21966.21	chr3	-	2579	10	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-395	0	intron_retention	FALSE	canonical	3	195	junction_8	15.8776183803522	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90308477	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90300199_90300402_90300571_90301052_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307947_90308374
ES.21966.22	chr3	-	2873	8	ISM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	37706	0	4952	0	intron_retention	FALSE	canonical	3	226	junction_5	9.2493794607078	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90303130	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629
ES.21966.24	chr3	-	4273	30	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_22	44.6291363321127	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340787	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317319_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.25	chr3	-	4765	9	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	1429	0	intron_retention	FALSE	canonical	3	226	junction_5	8.5110222652746	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90306653	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301495_90301629_90301706_90302444_90302514_90303684
ES.21966.26	chr3	-	4873	17	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-3895	0	intron_retention	FALSE	canonical	3	174	junction_13	21.8473932941667	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90314416	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311909_90313480
ES.21966.28	chr3	-	3650	7	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	3141	0	intron_retention	FALSE	canonical	3	226	junction_6	9.03234926989282	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90304941	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684
ES.21966.29	chr3	-	4664	29	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_27	45.1710468042058	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340839	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331306_90331395_90340110
ES.21966.3	chr3	-	2039	10	NNC	ENSMUSG00000027932.15	novel	2259	10	NA	NA	112	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.8803766838334	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGAGAGTCTGTGGGGC	NA	False	NA	-8	True	AATAAA	-23	NA	90297122	90292536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296090_90296478
ES.21966.31	chr3	-	4513	31	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_19	67.3420786399971	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340915	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311518_90311612_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340106
ES.21966.32	chr3	-	2110	12	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-362	0	intron_retention	FALSE	canonical	3	195	junction_9	16.6405856540295	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90308444	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374
ES.21966.33	chr3	-	4364	32	NNC	ENSMUSG00000027933.12	novel	4038	31	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	63.2453228601425	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340811	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90339592_90339726_90340110
ES.21966.35	chr3	-	4202	16	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-3045	0	intron_retention	FALSE	canonical	3	174	junction_11	23.8983030545871	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90313566	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90300199_90300402_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480
ES.21966.36	chr3	-	4284	29	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_9	58.8982497747651	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340830	90298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303686_90303839_90307610_90307731_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.39	chr3	-	4604	29	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	5	-2	intron_retention	FALSE	canonical	3	154	junction_20	22.591621844193	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90340915	90298704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.4	chr3	-	1990	9	NIC	ENSMUSG00000027932.15	novel	2259	10	NA	NA	118	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	42.3224231347875	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGAGAGTCTGTGGGG	NA	False	NA	-9	True	AATAAA	-22	NA	90297116	90292537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295996_90296207_90296478
ES.21966.41	chr3	-	4145	31	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	49	-2	intron_retention	FALSE	canonical	0	0	junction_30	43.8790762588883	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90340787	90298704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110_90340260_90340400
ES.21966.42	chr3	-	3912	10	ISM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	34755	2	2001	-2	3prime_fragment	FALSE	canonical	3	226	junction_5	9.11382073529328	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90306081	90298704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684
ES.21966.44	chr3	-	4387	30	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_3	44.4246078073259	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90340839	90298704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300048_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.46	chr3	-	4263	21	ISM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	25703	2	-4612	-2	3prime_fragment	FALSE	canonical	3	174	junction_16	21.2529997882652	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCCTGAGTTGAC	NA	False	NA	-13	True	AATGAA	-14	NA	90315133	90298704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480
ES.21966.5	chr3	-	3592	1	NIC	ENSMUSG00000027932.15	novel	2259	10	NA	NA	151	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	90296137	90292545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90292500_90296100
ES.21966.51	chr3	-	5587	26	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	-12358	-6	intron_retention	FALSE	canonical	3	154	junction_21	23.1977240262919	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTTGTGCCTGAGT	NA	False	NA	-17	True	AATGAA	-10	NA	90322879	90298708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90320904_90322464_90322550_90322799
ES.21966.52	chr3	-	5501	26	NIC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	0	-6	intron_retention	FALSE	canonical	3	154	junction_17	20.9508376920829	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTTGTGCCTGAGT	NA	False	NA	-17	True	AATGAA	-10	NA	90340929	90298708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90299413_90299518_90300199_90300402_90300571_90301052_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.55	chr3	-	4188	28	NNC	ENSMUSG00000027933.12	novel	4337	30	NA	NA	448	-6	intron_retention	FALSE	canonical	0	0	junction_9	45.9285542856014	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTTTGTGCCTGAGT	NA	False	NA	-17	True	AATGAA	-10	NA	90340162	90298708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90299413_90299518_90299676_90299834_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303793_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21966.56	chr3	-	223	1	Intergenic	novelGene_18149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGCTTCCTACATAGG	NA	False	NA	NA	False	AAAAAG	-29	NA	90329405	90329182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90329200_90329400
ES.21966.6	chr3	-	2886	9	NIC	ENSMUSG00000027932.15	novel	2259	10	NA	NA	88	-1	intron_retention	FALSE	canonical	3	73	junction_5	21.1246301742776	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCCCATCTTCGAGAG	NA	False	NA	-18	True	AATAAA	-13	NA	90297146	90292546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ES.21966.9	chr3	-	4584	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	-234	-13	-141	5	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATCTCTGTTCGTCCT	NA	False	NA	2	True	AATGAA	-29	NA	90341070	90298689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ES.21967.1	chr3	-	307	1	Intergenic	novelGene_18150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-10	NA	90349338	90349031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90349000_90349300
ES.21967.2	chr3	-	172	1	Intergenic	novelGene_18151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGCAAGTGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	90349337	90349165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90349200_90349300
ES.21968.1	chr3	+	131	1	Intergenic	novelGene_18152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90350350	90350481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_90350400_90350500
ES.21969.1	chr3	-	172	1	Intergenic	novelGene_18153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90350689	90350517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90350500_90350700
ES.2197.1	chr1	+	1528	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	4	714	4	-714	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGACTTTTTTGTTTT	NA	False	NA	6	True	NA	NA	NA	191058112	191082397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.10	chr1	+	7028	9	NNC	ENSMUSG00000026627.8	novel	2246	8	NA	NA	34	1042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.3677320121587	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAGAGCAAATGACATA	NA	False	NA	NA	False	TATAAA	-13	NA	191058142	191084153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191073266_191076912_191077044_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.12	chr1	+	2455	7	NIC	ENSMUSG00000026627.8	novel	2246	8	NA	NA	62	368	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.5322083904833	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGTGTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	191058170	191083479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191058274_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.13	chr1	+	4182	1	NIC	ENSMUSG00000026627.8	novel	2246	8	NA	NA	18245	-2576	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGTAACTGCCTGTTC	7157	False	NA	NA	False	NA	NA	NA	191076353	191080535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191076400_191080500
ES.2197.2	chr1	+	2229	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	16	1	16	-1	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCTGCTACCTTTGTC	NA	False	NA	5	True	AATAAA	-14	NA	191058124	191083110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.3	chr1	+	5475	8	NNC	ENSMUSG00000026627.8	novel	2246	8	NA	NA	20	-716	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	42.3984982406361	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATTTGACTTTTTTGTT	NA	False	NA	4	True	NA	NA	NA	191058128	191082395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191076912_191077044_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.4	chr1	+	2593	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	21	-368	21	368	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGTGTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	191058129	191083479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.5	chr1	+	1654	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	22	570	22	-570	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGATTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	191058130	191082541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ES.2197.6	chr1	+	1165	5	NNC	ENSMUSG00000026627.8	novel	2246	8	NA	NA	30	-9274	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	52.8890347803777	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATCATGATGTCCCTTC	NA	False	NA	NA	False	NA	NA	NA	191058138	191073837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191073266
ES.2197.8	chr1	+	1358	4	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	34	9268	34	-9268	5prime_fragment	FALSE	canonical	3	112	junction_2	13.0213499897497	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTCCCTTCACAGCA	NA	False	NA	NA	False	NA	NA	NA	191058142	191073843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923
ES.2197.9	chr1	+	905	5	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	34	5623	34	-5623	5prime_fragment	FALSE	canonical	3	95	junction_4	17.3114846272641	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTGTCTGCGTGCAT	NA	False	NA	NA	False	NA	NA	NA	191058142	191077488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173
ES.21970.1	chr3	-	828	1	Intergenic	novelGene_18154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90353765	90352937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90352900_90353800
ES.21971.1	chr3	+	1612	5	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	-508	699	intron_retention	FALSE	canonical	0	0	junction_2	2.06155281280883	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTAAGACAGGAT	382	False	NA	NA	False	NA	NA	NA	90358381	90365101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90358727_90362110_90362270_90362366_90362550_90363827_90363884_90364232
ES.21971.2	chr3	+	1370	3	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	-487	699	intron_retention	FALSE	canonical	3	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTAAGACAGGAT	403	False	NA	NA	False	NA	NA	NA	90358402	90365101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90358727_90362372_90362550_90364232
ES.21971.3	chr3	+	1342	4	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	-300	699	intron_retention	FALSE	canonical	1	2	junction_2	0.942809041582063	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTAAGACAGGAT	590	False	NA	NA	False	NA	NA	NA	90358589	90365101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90358727_90362110_90362270_90362372_90362550_90364232
ES.21971.4	chr3	+	4322	1	Genic_Genomic	ENSMUSG00000087411.2	novel	NA	NA	NA	NA	1898	707	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGGATGGTGTGAT	1155	False	NA	NA	False	NA	NA	NA	90360787	90365109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_90360800_90365100
ES.21971.5	chr3	+	1107	2	NNC	ENSMUSG00000087411.2	novel	663	4	NA	NA	4731	674	intron_retention	FALSE	canonical	3	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	458	False	NA	NA	False	NA	NA	NA	90363620	90365076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90363884_90364232
ES.21972.1	chr3	-	3670	2	FSM	ENSMUSG00000027931.13	ENSMUST00000152510.2	949	2	378	-3099	378	2980	multi-exon	FALSE	canonical	3	173	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	90358710	90354917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90358490_90358612
ES.21972.10	chr3	-	4105	22	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.7546254821222	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGTCTCTTCTTGGGA	NA	False	NA	-3	True	ATTAAA	-15	NA	90373202	90357899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365729_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371302_90372101
ES.21972.11	chr3	-	2006	13	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	-171	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.1299492978501	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAGTCTCTTCTTGGGA	NA	False	NA	-3	True	ATTAAA	-15	NA	90366417	90357899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366029_90366351
ES.21972.12	chr3	-	3372	20	NIC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	1906	-3	intron_retention	FALSE	canonical	3	14	junction_16	37.1481275369484	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACAGTCTCTTCTTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	90371267	90357900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370556_90371117
ES.21972.14	chr3	-	3926	21	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.6953578043769	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACAGTCTCTTCTTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	90373200	90357900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364383_90364627_90364784_90365378_90365446_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
ES.21972.15	chr3	-	851	3	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	86	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACAGTCTCTTCTTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	90359044	90357900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90358874
ES.21972.16	chr3	-	4870	21	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	-23	3	-23	-3	intron_retention	FALSE	canonical	3	14	junction_16	36.4621378967279	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACAGTCTCTTCTTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	90373196	90357900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117
ES.21972.2	chr3	-	2023	3	ISM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	10769	-1059	2379	1059	intron_retention	FALSE	canonical	3	97	junction_2	38	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACTATTTTACAAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	90362404	90356838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90358490_90358612_90358705_90362124
ES.21972.3	chr3	-	934	4	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	2368	91	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	63.2824356884805	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTGTTGTTGTTG	NA	False	NA	90	True	NA	NA	NA	90362415	90357806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362355
ES.21972.4	chr3	-	4197	23	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	-498	89	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_22	35.5690458797167	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTTGTTGTTGTTGT	NA	False	NA	88	True	NA	NA	NA	90373671	90357808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101_90373101_90373556
ES.21972.6	chr3	-	3952	21	NIC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	36.9925330303292	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90373173	90357897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90371117_90371318_90372101
ES.21972.8	chr3	-	2798	7	NIC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	709	-1	intron_retention	FALSE	canonical	3	17	junction_5	57.4572304704406	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTCTTCTTGGGAG	NA	False	NA	-2	True	ATTAAA	-16	NA	90365537	90357898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90358490_90358612_90358705_90362124_90362574_90363007_90363077_90363202_90363327_90363469_90364784_90365378
ES.21972.9	chr3	-	4338	21	NIC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	14	junction_15	36.572530675358	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTCTTCTTGGGAG	NA	False	NA	-2	True	ATTAAA	-16	NA	90373203	90357898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
ES.21973.1	chr3	-	148	1	Intergenic	novelGene_18155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	9440	False	NA	NA	False	NA	NA	NA	90380529	90380381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90380400_90380500
ES.21974.1	chr3	+	170	1	Intergenic	novelGene_18156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	90381900	90382070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_90381900_90382100
ES.21975.1	chr3	+	203	1	Intergenic	novelGene_18157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTGTATGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	90382630	90382833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_90382600_90382800
ES.21976.1	chr3	+	1669	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	-53	411	-32	5	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTTATTTTTCTTC	NA	False	NA	18	True	ATTAAA	-18	NA	90383400	90395275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.10	chr3	+	2617	12	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	-2	3	intron_retention	FALSE	canonical	3	1252	junction_8	68.3365516946872	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383444	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.11	chr3	+	1593	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	370.751036898006	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383454	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390130_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.12	chr3	+	1672	15	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	3	3	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_7	480.167556851836	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383456	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391598_90391660_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.13	chr3	+	2675	11	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	4	4	intron_retention	FALSE	canonical	3	1252	junction_8	71.3178799460556	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTTTTATTTTTCTT	NA	False	NA	17	True	ATTAAA	-17	NA	90383457	90395274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90394405_90394533_90394625_90394765
ES.21976.14	chr3	+	3787	11	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	4	-3	intron_retention	FALSE	canonical	3	1297	junction_7	59.7211017982756	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGTACAAGCATTTAT	NA	False	NA	15	True	AATAAA	-20	NA	90383457	90395683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.15	chr3	+	1679	13	FSM	ENSMUSG00000001016.13	ENSMUST00000196769.5	1702	13	26	-3	-5	3	multi-exon	FALSE	canonical	3	1252	junction_8	69.553137160655	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383458	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ES.21976.17	chr3	+	2004	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	369.474182586055	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383461	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388307_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.18	chr3	+	3786	10	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	1	3	intron_retention	FALSE	canonical	3	1297	junction_7	62.8474539590571	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383464	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90394405_90394533_90394625_90394765
ES.21976.19	chr3	+	2070	15	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	480.167556851836	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383464	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391598_90391660_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.2	chr3	+	2055	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	-32	4	-11	-4	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCAGTACAAGCATTTA	NA	False	NA	14	True	AATAAA	-19	NA	90383421	90395682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.20	chr3	+	1666	15	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	483.732617153277	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	90383464	90395270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90393746_90393813_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.21	chr3	+	3427	12	NNC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	1	-1	intron_retention	FALSE	canonical	2	7	junction_7	535.073888463736	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCTTTTGGTTTTATTT	NA	False	NA	12	True	ATTAAA	-12	NA	90383464	90395269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391598_90391660_90391760_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.22	chr3	+	3618	13	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	3	-7	intron_retention	FALSE	canonical	3	1252	junction_7	67.0743782842765	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383466	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.23	chr3	+	1621	15	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	482.250448312865	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383467	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391598_90391660_90391800_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.24	chr3	+	1738	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	14	275	4	141	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATACCATTGTGATGGCT	NA	False	NA	NA	False	TATAAA	-20	NA	90383467	90395411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.25	chr3	+	2846	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	367.456828362271	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTTGGTTTTATTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	90383470	90395272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90389026_90389085_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.26	chr3	+	3193	10	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	14	-3	intron_retention	FALSE	canonical	3	1252	junction_8	61.1121212037734	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGTACAAGCATTTAT	NA	False	NA	15	True	AATAAA	-20	NA	90383477	90395683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90394625_90394765
ES.21976.27	chr3	+	3891	12	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	17	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	396.879043546786	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383480	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90389026_90389085_90390150_90391760_90391878_90392996_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.28	chr3	+	2252	12	NNC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	20	3	intron_retention	FALSE	canonical	0	0	junction_8	401.157663611678	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383483	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392976_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.29	chr3	+	4256	10	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	20	0	intron_retention	FALSE	canonical	3	1252	junction_7	70.7407019584924	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	90383483	90395270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90391878_90392996_90394405_90394533_90394625_90394765
ES.21976.3	chr3	+	1939	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	-27	115	-6	-115	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGATCACCTCACATT	NA	False	NA	-97	True	NA	NA	NA	90383426	90395571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.30	chr3	+	1922	13	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	24	-9	combination_of_known_splicesites	FALSE	canonical	3	22	junction_10	378.089523129113	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATAACCAGTACAAGC	NA	False	NA	9	True	AATAAA	-14	NA	90383487	90395677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394289_90394405_90394533_90394625_90394765
ES.21976.31	chr3	+	3587	11	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	24	-11	intron_retention	FALSE	canonical	3	1281	junction_8	66.9403465781288	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTAAAATAACCAGTACAA	NA	False	NA	7	True	AATAAA	-12	NA	90383487	90395675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90393580_90394157_90394405_90394533_90394625_90394765
ES.21976.33	chr3	+	3097	13	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	29	-10	intron_retention	FALSE	canonical	3	1281	junction_9	61.3792287522597	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAATAACCAGTACAAG	NA	False	NA	8	True	AATAAA	-13	NA	90383492	90395676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.34	chr3	+	1979	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	367.41750271561	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383492	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384376_90384632_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.36	chr3	+	1958	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	41	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	370.825721837538	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383504	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90393007_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.37	chr3	+	1909	7	FSM	ENSMUSG00000001016.13	ENSMUST00000198325.5	3164	7	42	1213	42	-1213	multi-exon	FALSE	canonical	3	1316	junction_1	43.5982288121382	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGCCACCAAGCTTGA	NA	False	NA	NA	False	NA	NA	NA	90383505	90391556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083
ES.21976.38	chr3	+	1942	14	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	57	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	369.075672553754	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383520	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394209_90394289_90394405_90394533_90394625_90394765
ES.21976.39	chr3	+	1638	13	NNC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	58	5	intron_retention	FALSE	canonical	0	0	junction_8	384.142732443149	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTTATTTTTCTTC	NA	False	NA	18	True	ATTAAA	-18	NA	90383521	90395275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392976_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ES.21976.4	chr3	+	4361	11	NNC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	-6	-7	intron_retention	TRUE	non_canonical	0	0	junction_6	413.925609258475	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383426	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90389026_90389085_90390150_90391760_90391878_90392996_90394405_90394533_90394625_90394765
ES.21976.40	chr3	+	2191	12	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	62	4	intron_retention	FALSE	canonical	3	1252	junction_8	68.0004861431334	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTTTTATTTTTCTT	NA	False	NA	17	True	ATTAAA	-17	NA	90383525	90395274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.41	chr3	+	2496	1	FSM	ENSMUSG00000001016.13	ENSMUST00000197644.2	3167	1	682	-11	665	11	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATGAGTA	NA	False	NA	NA	False	NA	NA	NA	90384128	90386624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90384100_90386600
ES.21976.42	chr3	+	1636	9	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	5216	7	684	-7	3prime_fragment	FALSE	canonical	3	1252	junction_3	78.4449448658102	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90388669	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.43	chr3	+	2258	7	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	710	-7	intron_retention	FALSE	canonical	3	1252	junction_3	83.6728085395064	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90388695	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90394405_90394533_90394625_90394765
ES.21976.44	chr3	+	2671	5	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	1613	-1	intron_retention	FALSE	canonical	3	1252	junction_2	91.9140223252143	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCTTTTGGTTTTATTT	NA	False	NA	12	True	ATTAAA	-12	NA	90389598	90395269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90390150_90391760_90391878_90392996_90394405_90394533_90394625_90394765
ES.21976.45	chr3	+	3345	3	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	3671	1	intron_retention	FALSE	canonical	3	1318	junction_2	88	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTTGGTTTTATTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	90391656	90395271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90394405_90394533_90394625_90394765
ES.21976.46	chr3	+	1062	7	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	8305	413	3773	3	3prime_fragment	FALSE	canonical	3	1252	junction_1	80.0015624847415	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90391758	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.47	chr3	+	1465	5	ISM	ENSMUSG00000001016.13	ENSMUST00000196769.5	1702	13	9518	-409	4965	-7	3prime_fragment	FALSE	canonical	3	1281	junction_2	80.5263931888173	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90392950	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ES.21976.5	chr3	+	2112	13	FSM	ENSMUSG00000001016.13	ENSMUST00000196769.5	1702	13	-1	-409	-1	-7	multi-exon	FALSE	canonical	3	1252	junction_8	69.553137160655	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	90383431	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ES.21976.6	chr3	+	6092	5	NNC	ENSMUSG00000001016.13	novel	3164	7	NA	NA	1	-1244	intron_retention	FALSE	non_canonical	0	0	junction_4	597.21750644133	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90383433	90391525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90383553_90384311_90384372_90384626_90388378_90388670_90389850_90390542
ES.21976.7	chr3	+	2210	13	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	3	3	intron_retention	FALSE	canonical	3	1252	junction_8	65.4274407263497	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383435	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.8	chr3	+	3821	12	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	3	3	intron_retention	FALSE	canonical	3	1252	junction_7	64.1831058330786	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTTTATTTTTCT	NA	False	NA	16	True	ATTAAA	-16	NA	90383435	90395273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90391878_90392996_90393076_90393491_90394220_90394289_90394405_90394533_90394625_90394765
ES.21976.9	chr3	+	2745	13	NIC	ENSMUSG00000001016.13	novel	2027	14	NA	NA	-4	4	intron_retention	FALSE	canonical	3	1281	junction_9	61.3792287522597	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTTTTATTTTTCTT	NA	False	NA	17	True	ATTAAA	-17	NA	90383442	90395274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ES.21977.1	chr3	-	169	1	Antisense	novelGene_ENSMUSG00000001016.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	90390578	90390409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_90390400_90390600
ES.21978.1	chr3	-	2736	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	48	-856	8	848	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACATCCGTGTGAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	90398292	90394484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.10	chr3	-	1636	4	NNC	ENSMUSG00000001018.16	novel	1928	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_2	299.508857223882	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398339	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90396901_90397460_90397628_90397854_90397902_90398138
ES.21978.11	chr3	-	1492	3	FSM	ENSMUSG00000001018.16	ENSMUST00000185005.2	1505	3	4	9	4	-6	multi-exon	FALSE	canonical	3	32	junction_2	341	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTTAACAAAAAAATTTA	NA	False	NA	-35	True	AATAAA	-14	NA	90398296	90395685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90398138
ES.21978.12	chr3	-	1837	2	FSM	ENSMUSG00000001018.16	ENSMUST00000107352.2	1843	2	-571	577	-6	-230	multi-exon	FALSE	canonical	3	714	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTAAGCGCCATCCT	NA	False	NA	NA	False	TTTAAA	-5	NA	90398306	90395909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460
ES.21978.13	chr3	-	793	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	1	1134	1	-168	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCGGGCTCAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	90398339	90396474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.14	chr3	-	625	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	40	1263	0	-297	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAGCCTCTACCTTTT	NA	False	NA	NA	False	NA	NA	NA	90398300	90396603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.2	chr3	-	2042	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	1	-115	1	107	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAGATACTCAATGACC	NA	False	NA	NA	False	NA	NA	NA	90398339	90395225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.3	chr3	-	2465	2	FSM	ENSMUSG00000001018.16	ENSMUST00000107352.2	1843	2	-557	-65	8	65	multi-exon	FALSE	canonical	3	714	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTACTTTAATCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	90398292	90395267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460
ES.21978.5	chr3	-	1914	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	20	-6	11	-2	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGTTATAGAAGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	90398320	90395334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.6	chr3	-	1592	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	1	335	1	1	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTATTTTATTATG	NA	False	NA	-25	True	AATAAA	-24	NA	90398339	90395675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ES.21978.7	chr3	-	1558	4	NNC	ENSMUSG00000001018.16	novel	1928	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	331.969208746166	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398289	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90396901_90397460_90397580_90397854_90397922_90398138
ES.21978.8	chr3	-	2100	2	FSM	ENSMUSG00000001018.16	ENSMUST00000107352.2	1843	2	-604	347	1	0	multi-exon	FALSE	canonical	3	714	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398339	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460
ES.21978.9	chr3	-	1825	3	FSM	ENSMUSG00000001018.16	ENSMUST00000107351.2	958	3	-240	-627	1	0	multi-exon	FALSE	canonical	3	694	junction_2	10	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398339	90395679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90396901_90397460_90397580_90397854
ES.21979.1	chr3	+	5399	1	Antisense	novelGene_ENSMUSG00000001017.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAATCGAACACCCA	NA	False	NA	NA	False	NA	NA	NA	90410664	90416063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_90410700_90416100
ES.2198.1	chr1	+	8151	2	Antisense	novelGene_ENSMUSG00000026626.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAACATAAGGTGAATAA	3440	False	NA	NA	False	NA	NA	NA	191101861	191110339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_191102492_191102818
ES.21980.1	chr3	-	3064	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	36	1130	combination_of_known_junctions	TRUE	canonical	3	677	junction_3	303.893007487833	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTGCAGATGGGTGTTA	NA	False	NA	NA	False	ACTAAA	-13	NA	90416721	90405132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.10	chr3	-	3366	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-60	-49	-13	49	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGGTGTGTTAATATG	NA	False	NA	-3	True	NA	NA	NA	90416818	90406213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.12	chr3	-	1788	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	4	47	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	498.131147389922	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTGGTGTGTTAATA	NA	False	NA	-5	True	NA	NA	NA	90416325	90406215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416294
ES.21980.14	chr3	-	3498	2	ISM	ENSMUSG00000001017.16	ENSMUST00000146740.8	889	6	6227	-3248	5773	46	3prime_fragment	FALSE	canonical	3	1230	junction_1	0	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTGGTGTGTTAAT	NA	False	NA	-6	True	NA	NA	NA	90410556	90406216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90409561_90410402
ES.21980.15	chr3	-	4289	4	NNC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	1	46	intron_retention	FALSE	canonical	0	0	junction_2	697.637441655764	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTGGTGTGTTAAT	NA	False	NA	-6	True	NA	NA	NA	90416780	90406216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90410590_90413292_90414934_90416497
ES.21980.16	chr3	-	2910	6	NIC	ENSMUSG00000001017.16	novel	2972	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	6	junction_2	687.158089525256	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416768	90406262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90410590_90412701_90412786_90413414_90413569_90414851_90414934_90416497
ES.21980.18	chr3	-	4829	4	NIC	ENSMUSG00000001017.16	novel	1842	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	677	junction_1	389.641715768046	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416768	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.2	chr3	-	4270	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-21	-992	2	992	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAATCATGTTTAGTG	NA	False	NA	NA	False	AGTAAA	-20	NA	90416779	90405270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.21	chr3	-	3414	6	NNC	ENSMUSG00000001017.16	novel	2972	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	638.877265208271	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416783	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90407687_90407822_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.22	chr3	-	4198	5	NNC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	326	0	intron_retention	FALSE	canonical	3	28	junction_2	528.687052990708	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416003	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90407687_90407822_90409422_90409561_90410402_90410590_90413414
ES.21980.23	chr3	-	5995	1	NIC	ENSMUSG00000001017.16	novel	3118	4	NA	NA	4070	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	772	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90412259	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90406300_90412300
ES.21980.24	chr3	-	4398	4	ISM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	421	2	-8	0	3prime_fragment	FALSE	canonical	3	892	junction_3	172.615822629973	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416337	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414
ES.21980.25	chr3	-	1860	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	-3	-536	-1	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416784	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.27	chr3	-	2836	5	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	892	junction_2	257.638676250287	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416780	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.28	chr3	-	1843	7	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	625.725822989235	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416342	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409561_90410402_90410590_90412701_90412786_90413414_90413569_90414851_90414934_90416294
ES.21980.29	chr3	-	5645	4	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	1276	junction_2	160.997584522943	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416764	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90413569_90414851_90414934_90416497
ES.21980.3	chr3	-	3693	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-21	-415	2	415	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACCTGACTTTTGAATC	NA	False	NA	NA	False	AAGAAA	-12	NA	90416779	90405847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.33	chr3	-	6130	3	NIC	ENSMUSG00000001017.16	novel	889	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	892	junction_1	364	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416783	90406264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90410590_90413414_90414934_90416497
ES.21980.36	chr3	-	3254	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107342.2	2411	4	-107	-736	-94	-1	multi-exon	FALSE	canonical	3	97	junction_1	627.621435792841	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGCTTTCTGTTTA	NA	False	NA	-4	True	NA	NA	NA	90416899	90406265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90410402_90410587_90413414_90414934_90416497
ES.21980.37	chr3	-	2969	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	28	junction_2	643.459400428652	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGGCTTTCTGTTTA	NA	False	NA	-4	True	NA	NA	NA	90416783	90406265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90407687_90407822_90409422_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.39	chr3	-	4097	4	NIC	ENSMUSG00000001017.16	novel	2411	4	NA	NA	5	-3	intron_retention	FALSE	canonical	3	677	junction_2	390.012250519847	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCCAGGCTTTCTGTT	NA	False	NA	-6	True	NA	NA	NA	90416764	90406267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90410587_90413414_90414934_90416497
ES.21980.45	chr3	-	1928	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	489.712732119556	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	False	NA	-10	True	NA	NA	NA	90416341	90406271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416117
ES.21980.48	chr3	-	1970	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	567.458051313046	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTTAACCCAGGCTT	NA	False	NA	-12	True	NA	NA	NA	90416774	90406273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409428_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.49	chr3	-	1714	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	25	273	1	256	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTCTCATGCCCAAGA	NA	False	NA	NA	False	TATAAA	-15	NA	90416780	90406544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.5	chr3	-	5239	1	Genic_Genomic	ENSMUSG00000001017.16	novel	NA	NA	NA	NA	5046	218	mono-exon	FALSE	NA	NA	NA	NA	NA	772	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAGATAT	NA	False	NA	NA	False	NA	NA	NA	90411283	90406044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_90406000_90411300
ES.21980.51	chr3	-	2927	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	28	302	27	236	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATCTCTCCTTTTGGC	NA	False	NA	NA	False	AAGAAA	-14	NA	90416730	90406564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.52	chr3	-	1488	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	25	499	1	30	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGGAGCTAAAGGTG	NA	False	NA	NA	False	TTTAAA	-12	NA	90416780	90406770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.54	chr3	-	1296	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-3	27	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTCACCCAGATATC	NA	False	NA	-1	True	TTTAAA	-25	NA	90416795	90406974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.55	chr3	-	2596	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	-75	736	-28	3	multi-exon	FALSE	canonical	3	892	junction_3	258.017804618208	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGAGTTTGTTTTGT	NA	False	NA	-25	True	TTTAAA	-1	NA	90416833	90406998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ES.21980.56	chr3	-	8217	2	NIC	ENSMUSG00000001017.16	novel	2411	4	NA	NA	2	3	intron_retention	FALSE	canonical	3	1620	junction_1	0	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGAGTTTGTTTTGT	NA	False	NA	-25	True	TTTAAA	-1	NA	90416779	90406998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90414934_90416497
ES.21980.57	chr3	-	1319	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	-37	730	-37	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416842	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.58	chr3	-	4107	4	NIC	ENSMUSG00000001017.16	novel	1842	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_1	389.641715768046	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416783	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.6	chr3	-	2111	7	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	5	50	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	644.553592289527	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90416764	90406212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90412701_90412786_90413414_90413569_90414851_90414934_90416497
ES.21980.60	chr3	-	3876	3	ISM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	3031	739	2602	0	intron_retention	FALSE	canonical	3	1230	junction_2	25.5	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90413727	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90407415_90409422_90409561_90410402
ES.21980.61	chr3	-	2403	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	-24	739	0	0	multi-exon	FALSE	canonical	3	97	junction_1	621.962664117032	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416781	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90410402_90410590_90413414_90414934_90416497
ES.21980.62	chr3	-	2121	5	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	892	junction_2	257.638676250287	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416802	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.63	chr3	-	5388	3	NIC	ENSMUSG00000001017.16	novel	2411	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_1	471.5	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416781	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90410587_90413414_90414934_90416497
ES.21980.65	chr3	-	3386	4	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	892	junction_2	297.438322271283	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416784	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_90407415_90409422_90410590_90413414_90414934_90416497
ES.21980.66	chr3	-	1287	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	580.634273876422	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416803	90407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409558_90410398_90410590_90413414_90413569_90414851_90414930_90416487
ES.21980.69	chr3	-	1118	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	-14	738	0	-1	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTGGTTGAGTTTGTT	NA	False	NA	-29	True	NA	NA	NA	90416783	90407002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ES.21980.7	chr3	-	2102	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	-31	-59	-31	50	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90416836	90406212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ES.21980.70	chr3	-	1367	7	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	562.931316118287	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTGGTTGAGTTTGTT	NA	False	NA	-29	True	NA	NA	NA	90416787	90407002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416123_90416231_90416497
ES.21980.71	chr3	-	2654	6	NNC	ENSMUSG00000001017.16	novel	2411	4	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	627.963820613895	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTGGTTGAGTTTGTT	NA	False	NA	-29	True	NA	NA	NA	90416763	90407002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90407687_90407822_90409422_90409558_90410398_90410587_90413414_90414934_90416497
ES.21980.8	chr3	-	2025	6	NNC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	-4	50	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	580.634273876422	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTGTGTTAATATGT	NA	False	NA	-2	True	NA	NA	NA	90416763	90406212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90407415_90409422_90409556_90410396_90410590_90413414_90413569_90414851_90414934_90416502
ES.21981.1	chr3	-	178	1	Intergenic	novelGene_18158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCTGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	90418049	90417871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90417900_90418000
ES.21982.1	chr3	+	2584	3	NIC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-1578	-1	intron_retention	FALSE	canonical	3	229	junction_1	83.5	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTATTTATTTATTT	NA	False	NA	14	True	AATAAA	-19	NA	90420163	90431887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90422327_90423156_90423350_90431659
ES.21982.2	chr3	+	620	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-720	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	180.342883296113	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	False	NA	8	True	AATAAA	-13	NA	90421021	90431881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90421081_90422067_90422327_90423269_90423350_90431659
ES.21982.3	chr3	+	4986	2	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-597	-3088	intron_retention	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAAAGTGGC	NA	False	NA	NA	False	NA	NA	NA	90421144	90428800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90425359_90428028
ES.21982.4	chr3	+	2368	2	NIC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-538	-7	intron_retention	FALSE	canonical	3	396	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	False	NA	8	True	AATAAA	-13	NA	90421203	90431881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90423350_90431659
ES.21982.5	chr3	+	791	4	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-361	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.325461821476	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	False	NA	8	True	AATAAA	-13	NA	90421380	90431881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90421495_90422064_90422327_90423156_90423350_90431659
ES.21983.1	chr3	-	3383	1	Genic_Genomic	ENSMUSG00000044080.10	novel	NA	NA	NA	NA	-21	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTACCCTCTGGGC	NA	False	NA	0	True	AATAAA	-23	NA	90421720	90418337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_90418300_90421700
ES.21983.2	chr3	-	1160	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	-483	0	-483	0	multi-exon	FALSE	canonical	3	340	junction_1	21.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTCTGTACCCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	90422182	90418340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_90418672_90419302_90419457_90421507
ES.21983.3	chr3	-	2643	2	ISM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	84	1	-30	-1	intron_retention	FALSE	canonical	3	340	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATGTCTGTACCCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	90421615	90418341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_90418672_90419302
ES.21983.4	chr3	-	272	3	NNC	ENSMUSG00000044080.10	novel	677	3	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAATGTCTGTACCC	NA	False	NA	-7	True	AATAAA	-16	NA	90421630	90418344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_90418430_90419392_90419457_90421507
ES.21984.1	chr3	+	1055	4	FSM	ENSMUSG00000042306.12	ENSMUST00000167598.6	1059	4	0	4	0	-4	multi-exon	FALSE	canonical	2	2	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACGTTGTCTTGACTC	371	False	NA	11	True	AATAAA	-16	NA	90434176	90436140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90434207_90434478_90434601_90435020_90435168_90435384
ES.21984.2	chr3	+	1168	1	NIC	ENSMUSG00000042306.12	novel	915	3	NA	NA	793	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATACGTTGTCTTGACT	1166	False	NA	10	True	AATAAA	-15	NA	90434971	90436139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_90435000_90436100
ES.21985.1	chr3	+	1066	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	62	-1	1	1	multi-exon	FALSE	canonical	3	11	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTGGCTGCTTCCTTT	NA	False	NA	9	True	AATAAA	-20	NA	90444622	90450456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_90444725_90449300_90449480_90449671
ES.21985.2	chr3	+	1123	4	NNC	ENSMUSG00000074457.11	novel	1127	3	NA	NA	58	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.8423039781937	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTAACTCTTGGCTGC	NA	False	NA	2	True	AATAAA	-13	NA	90444689	90450449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_90444725_90446596_90446728_90449300_90449480_90449671
ES.21986.1	chr3	-	180	1	Intergenic	novelGene_18159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTCTGAAAAAA	1184	False	NA	NA	False	NA	NA	NA	90453916	90453736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_90453700_90453900
ES.21987.1	chr3	+	163	1	Intergenic	novelGene_18160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGTAGGCTTTAAAG	4860	False	NA	NA	False	NA	NA	NA	90481030	90481193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_90481000_90481200
ES.21988.1	chr3	+	157	1	Intergenic	novelGene_18161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	91870050	91870207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_91870000_91870200
ES.21989.1	chr3	+	2888	1	Intergenic	novelGene_18162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTCATGTAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	92089452	92092340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_92089500_92092300
ES.2199.1	chr1	+	177	1	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTCCTCA	NA	False	NA	NA	False	NA	NA	NA	191111682	191111859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191111700_191111900
ES.21990.1	chr3	-	128	1	FSM	ENSMUSG00000042165.9	ENSMUST00000192538.2	1392	1	1228	36	1228	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	92335502	92335374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_92335400_92335500
ES.21991.1	chr3	+	1896	1	FSM	ENSMUSG00000091421.4	ENSMUST00000169025.4	733	1	-129	-1034	-129	1034	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGAGAGATGAATCCAT	NA	False	NA	NA	False	AAAAAG	-5	NA	92596603	92598499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_92596600_92598500
ES.21992.1	chr3	+	177	1	Intergenic	novelGene_18163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGTATAATATG	7509	False	NA	NA	False	NA	NA	NA	92698514	92698691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_92698500_92698700
ES.21993.1	chr3	+	177	1	FSM	ENSMUSG00000103273.2	ENSMUST00000192925.2	2544	1	1830	537	1830	-537	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAACTGGGGA	NA	False	NA	NA	False	NA	NA	NA	93215604	93215781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_93215600_93215800
ES.21994.1	chr3	+	1057	1	Intergenic	novelGene_18164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCTCCTCCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	93307597	93308654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93307600_93308700
ES.21995.1	chr3	-	2758	4	NNC	ENSMUSG00000102476.2	novel	2713	4	NA	NA	53341	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTAGTATTCTTGTCTC	NA	False	NA	NA	False	TATAAA	-19	NA	93319325	93213768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_93216271_93266482_93266580_93318976_93319053_93319242
ES.21995.2	chr3	-	3269	7	NNC	ENSMUSG00000102476.2	novel	2713	4	NA	NA	53365	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTATCTAGTATTCT	NA	False	NA	NA	False	TATAAA	-13	NA	93319301	93213774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_93216271_93217990_93218208_93263622_93263793_93263893_93264048_93266482_93266580_93318976_93319053_93319242
ES.21995.3	chr3	-	3574	1	Antisense	novelGene_ENSMUSG00000103765.2_AS_novelGene_ENSMUSG00000041984.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGCTTTAGCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	93303356	93299782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_93299800_93303400
ES.21996.1	chr3	+	5376	2	NNC	ENSMUSG00000052415.6	novel	5823	2	NA	NA	1296	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTCTTGTCTGTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	93350932	93356380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_93354042_93354113
ES.21996.2	chr3	+	3744	2	NNC	ENSMUSG00000052415.6	novel	5823	2	NA	NA	3295	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAGACTTGGACAGCAA	NA	False	NA	NA	False	NA	NA	NA	93352931	93356747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_93354042_93354113
ES.21996.3	chr3	+	3327	2	NNC	ENSMUSG00000052415.6	novel	5823	2	NA	NA	3345	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTCTTGTCTGTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	93352981	93356380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_93354004_93354075
ES.21997.1	chr3	+	504	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	7	0	7	0	multi-exon	FALSE	canonical	3	443	junction_1	9.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	False	NA	7	True	AATAAA	-25	NA	93427801	93433594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_93427861_93431357_93431507_93433298
ES.21998.1	chr3	+	1557	1	Intergenic	novelGene_18165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATAGTTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	93435718	93437275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93435700_93437300
ES.21999.1	chr3	+	177	1	Intergenic	novelGene_18166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTTCCTTTTACAT	9986	False	NA	NA	False	NA	NA	NA	93457816	93457993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93457800_93458000
ES.22.1	chr1	+	2057	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	6	-14	6	14	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAATGTTTTGAAAT	NA	False	NA	112	True	AATAAA	-31	NA	5153308	5232766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.11	chr1	+	1692	12	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	39	18457	-5	-980	5prime_fragment	FALSE	canonical	3	428	junction_7	44.9403645249609	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTAATTCCATAGCCA	NA	False	NA	NA	False	ATTAAA	-17	NA	5153341	5214295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972
ES.22.13	chr1	+	4474	13	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-1	29	intron_retention	FALSE	canonical	3	428	junction_7	60.8200898826476	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	17	True	ATTAAA	-17	NA	5153345	5232671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.15	chr1	+	1899	14	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	148.247394381245	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAACATGTTCTTAAATT	NA	False	NA	11	True	ATTAAA	-11	NA	5153352	5232665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220183_5220285_5232327
ES.22.17	chr1	+	2013	15	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-2	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.048685951502	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153352	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5153750_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.18	chr1	+	1769	12	NIC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	0	26	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	202.705910003663	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153354	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153502_5154639_5154787_5159231_5159335_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.19	chr1	+	2261	13	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	9	16	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	194.844150683452	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAATGTTTTGAAATGA	NA	False	NA	114	True	AATAAA	-33	NA	5153363	5232768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.2	chr1	+	2016	15	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-13	26	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	189.436920738212	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153319	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154787_5158782_5158851_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.21	chr1	+	2380	15	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-4	-14	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	214.224669876449	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAGAAGTGTTCCCAGG	NA	False	NA	84	True	AATAAA	-23	NA	5153372	5232738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153849_5154639_5154787_5158782_5158851_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.22	chr1	+	2512	13	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-1	683	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	156.155082281116	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTATTTCTTTTAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	5153375	5233435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153502_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.23	chr1	+	2162	13	NIC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	12	26	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	186.594182355423	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153398	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.25	chr1	+	1842	14	NNC	ENSMUSG00000033793.13	novel	970	5	NA	NA	422	26	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	147.121935500201	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153808	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153885_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.26	chr1	+	3766	10	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	10114	29	intron_retention	FALSE	canonical	3	428	junction_3	67.6510655249913	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTTAAATTTTGCTT	NA	False	NA	17	True	ATTAAA	-17	NA	5163500	5232671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.27	chr1	+	3539	8	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	12594	-26	12584	26	3prime_fragment	FALSE	canonical	3	60	junction_1	182.465987884575	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5165970	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.28	chr1	+	6896	8	NNC	ENSMUSG00000033793.13	novel	1662	13	NA	NA	23536	26	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	202.993817137169	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5176922	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5179623_5184569_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.29	chr1	+	6645	1	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	72637	26	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5226023	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5226000_5232700
ES.22.30	chr1	+	176	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATCCTTACAAAT	NA	False	NA	NA	False	NA	NA	NA	5282607	5282783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_5282600_5282800
ES.22.4	chr1	+	1908	13	NNC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	-12	24	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	195.344336294202	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACATGTTCTTAAATTT	NA	False	NA	12	True	ATTAAA	-12	NA	5153320	5232666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154804_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.5	chr1	+	1891	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-54	-26	-10	26	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153322	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.6	chr1	+	1958	14	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	-6	26	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	149.697209185308	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153326	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154804_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.7	chr1	+	1962	15	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	3	60508	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	145.722058616213	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAAATGCTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	5153335	5293260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327_5232671_5293232
ES.22.8	chr1	+	1911	14	NNC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	6	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	149.767709683714	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTCTTAAATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	5153338	5232668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206052_5206161_5213972_5214075_5220170_5220285_5232327
ES.22.9	chr1	+	2337	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	6	-23	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATTGGGAGAAGT	NA	False	NA	75	True	AATAAA	-14	NA	5153338	5232729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ES.220.1	chr1	-	177	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTTCCG	NA	False	NA	NA	False	NA	NA	NA	33373021	33372844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33372800_33373000
ES.2200.1	chr1	+	4444	2	Antisense	novelGene_ENSMUSG00000026626.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTGTGAAAATACACT	NA	False	NA	NA	False	NA	NA	NA	191113697	191125913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_191113984_191121755
ES.2200.2	chr1	+	159	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	621	False	NA	NA	False	NA	NA	NA	191121684	191121843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191121700_191121800
ES.2200.3	chr1	+	155	2	Antisense	novelGene_ENSMUSG00000102246.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTTAAAA	624	False	NA	NA	False	NA	NA	NA	191121687	191285557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_191121736_191285450
ES.2200.4	chr1	+	158	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	191133972	191134130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191134000_191134100
ES.2200.5	chr1	+	178	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTTCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	191165740	191165918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191165700_191165900
ES.2200.6	chr1	+	175	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTACTCATAACAA	1766	False	NA	NA	False	NA	NA	NA	191196078	191196253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191196100_191196300
ES.2200.7	chr1	+	177	1	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATACTCT	6193	False	NA	NA	False	NA	NA	NA	191231646	191231823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191231600_191231800
ES.2200.8	chr1	+	3047	1	Antisense	novelGene_ENSMUSG00000037474.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATACTGTCTACCAGGAG	2421	False	NA	NA	False	AATAAA	-33	NA	191269552	191272599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_191269600_191272600
ES.2200.9	chr1	+	4996	1	Antisense	novelGene_ENSMUSG00000037474.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCATATCTTGCAGCTT	2421	False	NA	NA	False	NA	NA	NA	191269552	191274548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_191269600_191274500
ES.22000.1	chr3	+	680	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	5	0	5	0	multi-exon	TRUE	canonical	3	427	junction_2	41.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACGTAGAGTGTTTC	NA	False	NA	20	True	AATAAA	-24	NA	93462391	93471950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_93462519_93468250_93468403_93471549
ES.22001.1	chr3	+	176	1	Intergenic	novelGene_18167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGAGTGAGCAGGGCC	2893	False	NA	NA	False	NA	NA	NA	93473576	93473752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93473600_93473800
ES.22002.1	chr3	-	180	1	Intergenic	novelGene_18168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATAAAAAAAGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	93487917	93487737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_93487700_93487900
ES.22003.1	chr3	+	177	1	Intergenic	novelGene_18169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGAAGTACCCTGGA	NA	False	NA	5	True	NA	NA	NA	93491218	93491395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93491200_93491400
ES.22004.1	chr3	-	3262	1	Intergenic	novelGene_18170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGTCTTAAAGGTATA	NA	False	NA	NA	False	NA	NA	NA	93608685	93605423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_93605400_93608700
ES.22004.2	chr3	-	2417	2	Antisense	novelGene_ENSMUSG00000104229.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAATGGATTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	93626204	93605962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_93605972_93623796
ES.22005.1	chr3	+	1797	2	Genic_Genomic	ENSMUSG00000060256.2	novel	1113	1	NA	NA	-4791	526	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	93698913	93705343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_93699034_93703666
ES.22006.1	chr3	+	1961	2	Genic_Genomic	ENSMUSG00000058005.4	novel	1098	1	NA	NA	-5093	677	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGGATTCCAGAGATGT	NA	False	NA	NA	False	AATAAA	-13	NA	93728233	93735101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_93728350_93733256
ES.22007.1	chr3	-	1878	2	Genic_Genomic	ENSMUSG00000102169.2	novel	1018	1	NA	NA	-1664	705	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTCTGTGGATTCTA	NA	False	NA	NA	False	AATAAA	-8	NA	93783357	93779970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_93781728_93783236
ES.22008.1	chr3	+	180	1	Intergenic	novelGene_18171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	93869019	93869199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93869000_93869200
ES.22009.1	chr3	-	1888	2	Genic_Genomic	ENSMUSG00000094163.2	novel	1023	1	NA	NA	-1771	709	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTCTGTGGATTCTA	NA	False	NA	NA	False	NA	NA	NA	93870392	93866889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_93868656_93870270
ES.2201.1	chr1	+	208	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAAGGCTCT	7380	False	NA	NA	False	NA	NA	NA	191298112	191298320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191298100_191298300
ES.22010.1	chr3	+	1880	2	Genic_Genomic	ENSMUSG00000104059.2	novel	1092	1	NA	NA	-1650	631	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTCTGTGGATTCTA	7450	False	NA	NA	False	AATAAA	-8	NA	93915587	93918960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_93915711_93917203
ES.22011.1	chr3	+	180	1	Intergenic	novelGene_18172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	93980349	93980529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_93980300_93980500
ES.22012.1	chr3	-	1363	2	Genic_Genomic	ENSMUSG00000102311.2	novel	1091	1	NA	NA	-1525	114	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCAGCATGGTGGGTC	NA	False	NA	NA	False	NA	NA	NA	94067553	94064823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_94066063_94067429
ES.22013.1	chr3	-	172	1	Intergenic	novelGene_18173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAGCCAAATG	NA	False	NA	NA	False	NA	NA	NA	94204880	94204708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94204700_94204900
ES.22014.1	chr3	+	1743	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	36	2	-5	-2	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTTGCTTCTTGTTTTC	NA	False	NA	15	True	AATAAA	-25	NA	94217431	94239845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ES.22014.2	chr3	+	393	2	FSM	ENSMUSG00000028145.10	ENSMUST00000196824.2	940	2	-5	552	-5	-552	multi-exon	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGGGTAAAGTGTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	94217431	94224925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94217596_94224696
ES.22014.3	chr3	+	1164	5	NIC	ENSMUSG00000028145.10	novel	1781	6	NA	NA	-2	-385	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	7.81024967590665	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCTGTGCAATTGTATC	NA	False	NA	NA	False	ATTAAA	-16	NA	94217440	94239462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94217596_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ES.22014.4	chr3	+	1437	5	NIC	ENSMUSG00000028145.10	novel	1781	6	NA	NA	111	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	7.81024967590665	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTCTTGTTTTCACA	NA	False	NA	18	True	AATAAA	-28	NA	94217553	94239848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94217596_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ES.22014.5	chr3	+	1221	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	173	387	126	-387	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTACCTGTGCAATTGTA	NA	False	NA	NA	False	ATTAAA	-14	NA	94217568	94239460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ES.22015.1	chr3	+	2259	11	FSM	ENSMUSG00000028150.15	ENSMUST00000029795.10	2136	11	35	-158	35	158	multi-exon	FALSE	canonical	0	0	junction_7	1.32664991614216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAATGGAAACCT	NA	False	NA	NA	False	AAGAAA	-12	NA	94280135	94305305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94280239_94282341_94282372_94294427_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ES.22015.2	chr3	+	2180	10	FSM	ENSMUSG00000028150.15	ENSMUST00000197040.5	2576	10	-43	439	-43	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTTTCTTCTTCCT	NA	False	NA	NA	False	AATATA	-14	NA	94284695	94305144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94284911_94294427_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ES.22015.3	chr3	+	2336	10	FSM	ENSMUSG00000028150.15	ENSMUST00000197040.5	2576	10	-6	246	-6	190	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTCAGATTCGTTA	NA	False	NA	NA	False	AAGAAA	-44	NA	94284732	94305337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94284911_94294427_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ES.22015.4	chr3	+	5330	7	NIC	ENSMUSG00000028150.15	novel	2576	10	NA	NA	5995	-7	intron_retention	FALSE	canonical	0	0	junction_4	1.5723301886761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTCTGCCTTTCTTCT	NA	False	NA	NA	False	AATATA	-10	NA	94290817	94305140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298951_94299063_94300337_94300448_94304498
ES.22016.1	chr3	+	2106	5	NNC	ENSMUSG00000041912.13	novel	2476	12	NA	NA	-107	-9	intron_retention	FALSE	canonical	0	0	junction_1	19.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACACATATTTTATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	94320472	94333686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94320531_94330108_94330259_94331001_94331109_94331807_94333010_94333097
ES.22016.2	chr3	+	1308	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-76	-1	-32	1	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTATGTATGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	94320547	94333696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ES.22016.3	chr3	+	2077	5	NIC	ENSMUSG00000041912.13	novel	1231	6	NA	NA	-26	-16	intron_retention	FALSE	canonical	2	27	junction_4	9.36416040016402	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACAAAGGAAAATAAGATA	NA	False	NA	NA	False	AATAAA	-14	NA	94320553	94333599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94333010_94333097
ES.22016.4	chr3	+	5856	14	NNC	ENSMUSG00000041912.13	novel	5692	14	NA	NA	-19	185	intron_retention	FALSE	canonical	1	1	junction_7	17.0512627723045	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGTCTGTGTGCTAC	NA	False	NA	NA	False	NA	NA	NA	94320560	94342160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94320630_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
ES.22016.5	chr3	+	2260	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-59	-970	-15	970	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTATGTTGCCTGTCT	NA	False	NA	NA	False	CATAAA	-13	NA	94320564	94334665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ES.22016.6	chr3	+	1056	6	NNC	ENSMUSG00000041912.13	novel	1231	6	NA	NA	5	-94	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.4024388430501	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTGTCATCATAGATAA	NA	False	NA	NA	False	ATTAAA	-21	NA	94320584	94333521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94320630_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ES.22016.7	chr3	+	1084	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	-27	174	-10	-94	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTGTCATCATAGATAA	NA	False	NA	NA	False	ATTAAA	-21	NA	94320596	94333521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ES.22016.9	chr3	+	5025	1	FSM	ENSMUSG00000106032.2	ENSMUST00000198041.2	4886	1	-105	-34	-105	34	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAATGACTGGATG	NA	False	NA	NA	False	NA	NA	NA	94320602	94325627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94320600_94325600
ES.22017.1	chr3	+	1657	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	-32	-13	-25	13	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCTGTGTTATTTCTT	8458	False	NA	NA	False	NA	NA	NA	94350599	94356028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ES.22017.2	chr3	+	1844	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	-10	-222	-3	222	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTATGTATATATAT	8480	False	NA	NA	False	NA	NA	NA	94350621	94356237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ES.22017.4	chr3	+	1666	7	FSM	ENSMUSG00000028140.14	ENSMUST00000196143.2	1657	7	-10	1	2	-1	multi-exon	FALSE	canonical	3	3	junction_6	82.6068331852086	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGGCTCCATTTTCT	8492	False	NA	NA	False	NA	NA	NA	94350633	94358436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94357457
ES.22017.5	chr3	+	1476	6	NNC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.3529419340177	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	8502	False	NA	NA	False	NA	NA	NA	94350643	94356015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94355132
ES.22017.6	chr3	+	3523	3	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	188	junction_2	17.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	8503	False	NA	NA	False	NA	NA	NA	94350644	94356015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94350802_94350965_94352259_94353942
ES.22017.7	chr3	+	1758	6	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	19	13	intron_retention	FALSE	canonical	3	188	junction_3	28.1097847732778	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCTGTGTTATTTCTT	8521	False	NA	NA	False	NA	NA	NA	94350662	94356028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ES.22017.8	chr3	+	1535	5	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	135	-10	intron_retention	FALSE	canonical	3	10	junction_4	94.396437962457	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAAAGAA	8637	False	NA	NA	False	NA	NA	NA	94350778	94356005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94355092
ES.22018.1	chr3	-	5216	1	Antisense	novelGene_ENSMUSG00000028137.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	94398854	94393638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_94393600_94398900
ES.22019.1	chr3	+	175	1	Intergenic	novelGene_18175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAAAAAATACAT	5384	False	NA	NA	False	NA	NA	NA	94448714	94448889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94448700_94448900
ES.2202.11	chr1	+	4106	19	FSM	ENSMUSG00000037461.11	ENSMUST00000194877.6	3069	19	-7	-1030	-7	-70	multi-exon	FALSE	canonical	1	2	junction_1	68.875894831856	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTTACCTTTTTTT	8292	False	NA	28	True	AATAAA	-17	NA	191307846	191354788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.12	chr1	+	3336	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	102	1909	-4	133	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACCTGCCTCTGCCTCCC	8295	False	NA	NA	False	NA	NA	NA	191307849	191353891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.13	chr1	+	3193	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-4	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.2963630694225	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCGAGACAGGGTTTC	8295	False	NA	NA	False	AATAAA	-20	NA	191307849	191353808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349983_191350023_191351707_191351894_191353276
ES.2202.14	chr1	+	4730	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	102	515	-4	427	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGTGGTGAAGAAAATTG	8295	False	NA	NA	False	ATTAAA	-10	NA	191307849	191355285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.15	chr1	+	4112	19	NIC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-3	-72	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	68.7819061765807	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8296	False	NA	26	True	AATAAA	-15	NA	191307850	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.16	chr1	+	3901	19	NNC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	3	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	87.1145832641352	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8302	False	NA	26	True	AATAAA	-15	NA	191307856	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.17	chr1	+	3739	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	7	-507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTATGTGACTAGTGTGG	8306	False	NA	NA	False	AATGAA	-14	NA	191307860	191354351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.18	chr1	+	6790	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	7	1	intron_retention	FALSE	non_canonical	0	0	junction_19	66.6886344231072	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTTGAGTGTGAAAGTAAC	8306	False	NA	3	True	AATAAA	-13	NA	191307860	191355801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.19	chr1	+	3249	19	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	8	196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	87.9047604716619	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTGTCTCACACTTAG	8307	False	NA	NA	False	NA	NA	NA	191307861	191353954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338311_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.2	chr1	+	4327	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	14	1006	14	-64	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACCTTTTTTTTCTCTT	8207	False	NA	34	True	AATAAA	-23	NA	191307761	191354794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.20	chr1	+	3284	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-10	49	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	84.4823058397437	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCGAGACAGGGTTT	8309	False	NA	NA	False	AATAAA	-19	NA	191307863	191353807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191313959_191314006_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.21	chr1	+	3785	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	118	1444	-8	-502	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACTAGTGTGGACTTC	8311	False	NA	NA	False	AATGAA	-19	NA	191307865	191354356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.22	chr1	+	5064	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-8	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	87.38154625571	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGTAACTGAAGCAAAC	8311	False	NA	13	True	AATAAA	-23	NA	191307865	191355811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.23	chr1	+	4064	18	NIC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-2	51	intron_retention	FALSE	canonical	1	1	junction_7	70.4356684571351	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGAGACAGGGTTTCT	8317	False	NA	NA	False	AATAAA	-21	NA	191307871	191353809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.24	chr1	+	2971	14	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-2	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	99.9058136328069	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTACCTTTTTTTT	8317	False	NA	29	True	AATAAA	-18	NA	191307871	191354789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191344112_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.25	chr1	+	5167	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.0119380483827	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTTGAGTGTGAAAGT	8317	False	NA	0	True	AATAAA	-10	NA	191307871	191355798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191329004_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339933_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.26	chr1	+	4051	19	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	0	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.9816803377695	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8319	False	NA	26	True	AATAAA	-15	NA	191307873	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329084_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.27	chr1	+	8063	19	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	0	-72	intron_retention	FALSE	non_canonical	0	0	junction_18	68.3213404109986	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8319	False	NA	26	True	AATAAA	-15	NA	191307873	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353907_191353955
ES.2202.29	chr1	+	5255	19	NIC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	1	-76	intron_retention	FALSE	canonical	2	189	junction_14	32.8411816151085	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTGTGTTTTACCT	8320	False	NA	22	True	AATAAA	-11	NA	191307874	191354782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.3	chr1	+	3029	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	-81	1054	45	46	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTCGAGACAGGG	8238	False	NA	NA	False	AATAAA	-16	NA	191307792	191353804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.30	chr1	+	3219	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	1	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.2963630694225	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCGAGACAG	8320	False	NA	NA	False	AATAAA	-14	NA	191307874	191353802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347950_191349930_191350023_191351707_191351894_191353276
ES.2202.33	chr1	+	3929	18	FSM	ENSMUSG00000037461.11	ENSMUST00000194785.2	4002	18	1	72	1	-72	multi-exon	FALSE	canonical	2	19	junction_1	67.3081022079613	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8320	False	NA	26	True	AATAAA	-15	NA	191307874	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.34	chr1	+	4301	22	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	2	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	108.011967087048	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTACCTTTTTTTT	8321	False	NA	29	True	AATAAA	-18	NA	191307875	191354789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191313870_191314006_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347950_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.36	chr1	+	4077	19	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	3	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	102.391345602648	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTGTTTTACCTTT	8322	False	NA	24	True	AATAAA	-13	NA	191307876	191354784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347727_191347854_191349923_191350023_191351707_191351894_191353276
ES.2202.37	chr1	+	7551	14	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	3	-5568	intron_retention	TRUE	non_canonical	0	0	junction_11	75.6403042121181	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACAAATGTAGCCAGCC	8322	False	NA	NA	False	NA	NA	NA	191307876	191348190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191338331_191339931_191340172_191342475_191342614_191343969_191344480_191344584_191345855_191346690_191346760_191347812
ES.2202.40	chr1	+	6037	19	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-1	-72	intron_retention	FALSE	non_canonical	0	0	junction_18	67.9992964742111	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8332	False	NA	26	True	AATAAA	-15	NA	191307886	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.42	chr1	+	8099	18	NIC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-1	-72	intron_retention	FALSE	canonical	2	189	junction_12	32.6374654691374	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8332	False	NA	26	True	AATAAA	-15	NA	191307886	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.43	chr1	+	4019	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-1	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	87.38154625571	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTTACCTTTTTT	8332	False	NA	27	True	AATAAA	-16	NA	191307886	191354787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.45	chr1	+	4314	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	0	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.58486060034	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTTACCTTTTTT	8333	False	NA	27	True	AATAAA	-16	NA	191307887	191354787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191327531_191327731_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347727_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.47	chr1	+	4124	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	5	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.5806715508928	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTTACCTTTTTTT	8338	False	NA	28	True	AATAAA	-17	NA	191307892	191354788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338311_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.48	chr1	+	4991	17	NIC	ENSMUSG00000037461.11	novel	3069	19	NA	NA	7	-72	intron_retention	FALSE	canonical	1	1	junction_6	92.4253076813921	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTTTTACCTTTTT	8340	False	NA	26	True	AATAAA	-15	NA	191307894	191354786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191308064_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.49	chr1	+	4881	19	NNC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	87.1145832641352	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAAAGTAACTGAAG	8342	False	NA	8	True	AATAAA	-18	NA	191307896	191355806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.5	chr1	+	4294	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTTGGTTTTTGT	8253	False	NA	93	True	NA	NA	NA	191307807	191354853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.50	chr1	+	4045	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	11	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	85.0804766089142	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTTACCTTTTTT	8344	False	NA	27	True	AATAAA	-16	NA	191307898	191354787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347854_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.51	chr1	+	5085	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	85.0804766089142	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTTGAGTGTGAAAGTA	8348	False	NA	1	True	AATAAA	-11	NA	191307902	191355799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349983_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.52	chr1	+	3975	20	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	6621	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	67.5484026724623	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTTACCTTTTTTT	NA	False	NA	28	True	AATAAA	-17	NA	191314508	191354788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.53	chr1	+	6571	14	NNC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	21172	5	intron_retention	FALSE	non_canonical	0	0	junction_13	79.028269977403	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGTGAAAGTAACTGAA	894	False	NA	7	True	AATAAA	-17	NA	191329059	191355805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.54	chr1	+	6163	8	NIC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	31039	51	intron_retention	FALSE	canonical	2	189	junction_2	45.4312667664022	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGAGACAGGGTTTCT	6819	False	NA	NA	False	AATAAA	-21	NA	191338926	191353809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191342614_191343969_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.55	chr1	+	2016	4	NIC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	38862	53	intron_retention	FALSE	canonical	2	193	junction_1	48.9920628492231	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGACAGGGTTTCTCT	7292	False	NA	NA	False	AATAAA	-23	NA	191346749	191353811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191347946_191349923_191350023_191351707_191351894_191353276
ES.2202.56	chr1	+	2653	3	ISM	ENSMUSG00000037461.11	ENSMUST00000194877.6	3069	19	40184	0	40150	0	3prime_fragment	FALSE	canonical	3	254	junction_2	29.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAACCTGGCTCTCA	8580	False	NA	NA	False	NA	NA	NA	191348037	191353758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191350023_191351707_191351894_191353276
ES.2202.57	chr1	+	3152	4	NNC	ENSMUSG00000037461.11	novel	4002	18	NA	NA	40636	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	135.796416251191	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTACCTTTTTTTT	9066	False	NA	29	True	AATAAA	-18	NA	191348523	191354789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.6	chr1	+	5246	21	NNC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	-30	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9688562884032	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAAAGTAACTGAAG	8254	False	NA	8	True	AATAAA	-18	NA	191307808	191355806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276_191353910_191353955
ES.2202.7	chr1	+	3503	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	91	1753	0	289	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTGTGTCTCTGTCTA	8284	False	NA	NA	False	NA	NA	NA	191307838	191354047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ES.22020.1	chr3	+	1086	1	Intergenic	novelGene_18176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTGCCTTCAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	94455394	94456480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94455400_94456500
ES.22021.1	chr3	+	5393	1	Antisense	novelGene_ENSMUSG00000105412.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCAAAACCAATACCATGA	2934	False	NA	NA	False	NA	NA	NA	94482072	94487465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_94482100_94487500
ES.22022.1	chr3	-	6319	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	-56	-2	-56	2	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTTCCTAGACTACA	NA	False	NA	0	True	AATAAA	-23	NA	94490079	94404848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.11	chr3	-	5204	12	NNC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	62.9037044462236	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTTCCTAGACT	NA	False	NA	-3	True	AATAAA	-20	NA	94490044	94404851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489834
ES.22022.12	chr3	-	5205	11	NIC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	64.0256979657387	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTGGTTTCCTAGAC	NA	False	NA	-4	True	AATAAA	-19	NA	94489868	94404852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.14	chr3	-	6546	10	ISM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	49375	-1767	-1302	-2	3prime_fragment	FALSE	canonical	3	101	junction_1	33.5327369065581	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTGGTTTCCTAGAC	NA	False	NA	-4	True	AATAAA	-19	NA	94440481	94404852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503
ES.22022.16	chr3	-	5304	12	NNC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	62.5217978517218	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489880	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469089_94469308_94489551
ES.22022.17	chr3	-	5309	12	NNC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.8650891553415	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489881	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427564_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.18	chr3	-	5067	11	NIC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	65.538461989888	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489861	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489551
ES.22022.19	chr3	-	5797	11	NIC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	31.9631037291437	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489885	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94409476_94409537_94410162_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.2	chr3	-	5501	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-199	-1771	-32	2	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTTCCTAGACTACA	NA	False	NA	0	True	AATAAA	-23	NA	94490055	94404848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.20	chr3	-	5966	12	FSM	ENSMUSG00000028136.16	ENSMUST00000199462.5	2510	12	121	-3577	-9	-6	multi-exon	FALSE	canonical	0	0	junction_11	66.0204075636923	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489865	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489682
ES.22022.21	chr3	-	4943	11	NIC	ENSMUSG00000028136.16	novel	3531	12	NA	NA	-12	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	65.538461989888	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489868	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ES.22022.22	chr3	-	5801	11	NNC	ENSMUSG00000028136.16	novel	1308	11	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.7372533638056	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTCTTTGGTTTCCT	NA	False	NA	-8	True	AATAAA	-15	NA	94489872	94404856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489622
ES.22022.23	chr3	-	2234	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-21	1318	-21	410	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGCTTGGGTTTTCT	NA	False	NA	NA	False	AATACA	-39	NA	94489877	94407937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.24	chr3	-	1978	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	-194	1747	-27	-19	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTGGAACTGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	94490050	94408366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.25	chr3	-	2580	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	108	3573	-59	10	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTATGTCCCAAAGTCC	NA	False	NA	NA	False	AAAAAG	-10	NA	94489915	94408423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.26	chr3	-	1347	11	NIC	ENSMUSG00000028136.16	novel	2510	12	NA	NA	-8	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	65.538461989888	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAGAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	94489864	94408448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ES.22022.28	chr3	-	1951	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	151	4159	-16	354	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTTTATAGGTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	94489872	94409009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.29	chr3	-	5651	3	NIC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-12	-4726	intron_retention	FALSE	canonical	0	0	junction_2	95	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGTGTTTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	94489868	94431142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94436284_94438503_94438697_94489551
ES.22022.30	chr3	-	1734	1	Intergenic	novelGene_18174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGGATGAAGCAGGGCA	NA	False	NA	NA	False	NA	NA	NA	94449099	94447365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94447400_94449100
ES.22022.4	chr3	-	6307	11	NIC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	22	1	intron_retention	FALSE	canonical	3	179	junction_10	12.2245654319489	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTTCCTAGACTAC	NA	False	NA	-1	True	AATAAA	-22	NA	94489964	94404849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.5	chr3	-	4846	11	NNC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-5349	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.538461989888	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	5904	False	NA	-2	True	AATAAA	-21	NA	94495372	94404850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94495289
ES.22022.6	chr3	-	3857	13	NNC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.2404326198129	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94490000	94404850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94406186_94407772_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22022.7	chr3	-	5199	12	NNC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	62.5217978517218	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489887	94404850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438579_94469089_94469308_94489551
ES.22022.8	chr3	-	5006	11	NNC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.538461989888	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489865	94404850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489622
ES.22022.9	chr3	-	5248	11	NIC	ENSMUSG00000028136.16	novel	6261	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	61.2832766747993	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489864	94404850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94408579_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ES.22023.1	chr3	-	194	1	Intergenic	novelGene_18177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTAATGAATTGATTG	NA	False	NA	NA	False	NA	NA	NA	94516728	94516534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94516500_94516700
ES.22024.1	chr3	+	6920	2	Intergenic	novelGene_18179	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATAGCATGGGGGA	NA	False	NA	NA	False	NA	NA	NA	94535641	94629986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94539446_94626870
ES.22025.1	chr3	+	168	1	Intergenic	novelGene_18182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	94651141	94651309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94651100_94651300
ES.22026.1	chr3	-	2559	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	2	-6	1	4	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGGTCTTTTACTTC	6442	False	NA	-1	True	AATAAA	-20	NA	94566177	94520059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ES.22026.10	chr3	-	2518	12	NNC	ENSMUSG00000005968.15	novel	2555	12	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1110725576119	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTCTTTGCCCCGTGG	6465	False	NA	-13	True	AATAAA	-8	NA	94566154	94520071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94521493_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ES.22026.11	chr3	-	2554	12	Fusion	ENSMUSG00000005968.15_ENSMUSG00000081355.2	novel	2555	12	NA	NA	-71	-6	multi-exon	FALSE	non_canonical	3	14	junction_10	27.6572887289176	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTCTTTGCCCCGTGG	NA	False	NA	-13	True	AATAAA	-8	NA	94665494	94520071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94627329_94627396_94629191_94629282_94630124_94630212_94640266_94640369_94665341
ES.22026.12	chr3	-	179	1	Intergenic	novelGene_18178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	94525120	94524941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94524900_94525100
ES.22026.13	chr3	-	3109	12	NNC	ENSMUSG00000085006.8	novel	1716	11	NA	NA	-301	1243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.98759475633677	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	9760	False	NA	NA	False	ATTAAA	-23	NA	94578304	94567893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94569357_94569628_94569793_94570413_94570523_94570836_94570956_94571042_94571127_94572282_94572373_94573289_94573452_94574420_94574592_94576464_94576723_94577262_94577470_94577788_94578004_94578237
ES.22026.14	chr3	-	3556	17	Fusion	ENSMUSG00000085006.8_ENSMUSG00000081355.2	novel	1716	11	NA	NA	-24	1237	multi-exon	FALSE	non_canonical	0	0	junction_3	19.7879382453049	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGAAATTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	94665447	94567899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94569357_94569628_94569793_94570413_94570523_94570836_94570956_94571042_94571127_94572282_94572373_94573289_94573452_94574420_94574592_94576464_94576723_94577262_94577470_94577794_94578004_94627329_94627396_94629191_94629282_94630124_94630212_94640266_94640369_94640735_94640811_94665341
ES.22026.16	chr3	-	177	1	Intergenic	novelGene_18180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTCCTCT	4433	False	NA	NA	False	NA	NA	NA	94583631	94583454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94583500_94583600
ES.22026.17	chr3	-	750	7	NNC	ENSMUSG00000081355.2	novel	502	6	NA	NA	-41	2291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.1318795679343	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGCAATGCCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	94665464	94625038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94625246_94627329_94627396_94629191_94629282_94630124_94630212_94640266_94640369_94640735_94640811_94665341
ES.22026.18	chr3	-	3760	1	Intergenic	novelGene_18181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTGTCTATTTGTTTT	5481	False	NA	NA	False	AATAAA	-20	NA	94653379	94649619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94649600_94653400
ES.22026.19	chr3	-	2666	1	Intergenic	novelGene_18183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTGTGTCCCGTGTGCT	3230	False	NA	NA	False	NA	NA	NA	94655630	94652964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94653000_94655600
ES.22026.2	chr3	-	5374	6	NNC	ENSMUSG00000005968.15	novel	2156	11	NA	NA	-15785	3	intron_retention	FALSE	canonical	0	0	junction_5	37.8132251996573	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGTGGGTCTTTTACTT	NA	False	NA	-2	True	AATAAA	-19	NA	94538393	94520060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94530113_94535503
ES.22026.3	chr3	-	2640	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	-7	-2	-6	2	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCGTGGGTCTTTTACT	6434	False	NA	-3	True	AATAAA	-18	NA	94566185	94520061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
ES.22026.4	chr3	-	6857	12	NIC	ENSMUSG00000005968.15	novel	2631	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	30.3688073985449	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6509	False	NA	-5	True	AATAAA	-16	NA	94566110	94520063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546693_94546777_94566031
ES.22026.5	chr3	-	3918	12	ISM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	17967	1	17896	1	3prime_fragment	FALSE	canonical	3	34	junction_11	20.856455488342	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCCCGTGGGTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	94548211	94520064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701
ES.22026.6	chr3	-	3093	11	NIC	ENSMUSG00000005968.15	novel	2555	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	51	junction_8	17.5772580341759	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	6444	False	NA	-7	True	AATAAA	-14	NA	94566175	94520065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ES.22026.7	chr3	-	4311	11	NIC	ENSMUSG00000005968.15	novel	2555	12	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	51	junction_8	17.2290452434254	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCCCCGTGGGTCTT	6478	False	NA	-8	True	AATAAA	-13	NA	94566141	94520066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94541855_94542715_94542803_94546231_94546334_94566031
ES.22026.9	chr3	-	3167	12	NIC	ENSMUSG00000005968.15	novel	2631	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	34	junction_10	23.6925904656964	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGCCCCGTGGGTCT	6443	False	NA	-9	True	AATAAA	-12	NA	94566176	94520067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
ES.22027.1	chr3	-	5006	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	-43	0	9	0	multi-exon	FALSE	canonical	3	13	junction_12	7.64509646767129	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCATTTTTCTG	NA	False	NA	NA	False	ATTAAA	-28	NA	94693817	94667375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ES.22027.2	chr3	-	5006	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107273.9	5016	21	10	0	10	0	multi-exon	FALSE	canonical	2	3	junction_17	8.61553828846463	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCATTTTTCTG	NA	False	NA	NA	False	ATTAAA	-28	NA	94693793	94667375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685400_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ES.22027.4	chr3	-	3664	16	NNC	ENSMUSG00000068876.17	novel	4963	21	NA	NA	10376	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.75340396420085	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	94683386	94667380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683352
ES.22027.5	chr3	-	5296	20	NNC	ENSMUSG00000068876.17	novel	4963	21	NA	NA	5	-5	intron_retention	FALSE	canonical	0	0	junction_8	9.17602560934632	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCTTGTCTTCATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	94693769	94667380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94668809_94669080_94669245_94669865_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676757_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ES.22027.8	chr3	-	189	1	Intergenic	novelGene_18184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAACAGTGAGCTTTGCC	NA	False	NA	NA	False	AATAGA	-7	NA	94681202	94681013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94681000_94681200
ES.22028.1	chr3	-	174	1	Intergenic	novelGene_18185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATGAAACTAAG	NA	False	NA	NA	False	NA	NA	NA	94730257	94730083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94730100_94730300
ES.22029.1	chr3	+	5034	18	FSM	ENSMUSG00000038902.15	ENSMUST00000107266.8	4100	18	-374	-560	-228	17	multi-exon	FALSE	canonical	3	9	junction_2	17.1879494279083	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTTCCTTCTGCTCCT	NA	False	NA	85	True	TATAAA	-28	NA	94744649	94788203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.10	chr3	+	5078	19	NNC	ENSMUSG00000038902.15	novel	4775	19	NA	NA	-158	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	22.0919095855429	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCCACTGAACTCTTT	NA	False	NA	73	True	TATAAA	-16	NA	94744719	94788191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771404_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.11	chr3	+	4794	18	NIC	ENSMUSG00000038902.15	novel	4775	19	NA	NA	-157	7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	18.277370810295	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCACTGAACTCTTTCC	NA	False	NA	75	True	TATAAA	-18	NA	94744720	94788193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.13	chr3	+	6516	19	FSM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	-293	-1448	-147	-1	multi-exon	FALSE	canonical	3	5	junction_6	17.676796536773	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTCTGTGTTAAGTAT	NA	False	NA	13	True	AATAAA	-15	NA	94744730	94789634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.14	chr3	+	4782	18	NNC	ENSMUSG00000038902.15	novel	4775	19	NA	NA	-139	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.1210219526324	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94744738	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771324_94771349_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.17	chr3	+	6376	17	NNC	ENSMUSG00000038902.15	novel	4100	18	NA	NA	-136	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	21.2010465543567	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGTTAAGTATA	NA	False	NA	14	True	AATAAA	-16	NA	94744741	94789635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.19	chr3	+	5625	18	NIC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-118	5	intron_retention	FALSE	canonical	3	43	junction_5	12.1467383521321	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCCACTGAACTCTTT	NA	False	NA	73	True	TATAAA	-16	NA	94744759	94788191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.2	chr3	+	5175	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-213	1437	-213	14	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTCTTTCCTTCTGCT	NA	False	NA	82	True	TATAAA	-25	NA	94744664	94788200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.20	chr3	+	4628	18	NIC	ENSMUSG00000038902.15	novel	4775	19	NA	NA	-9	-13	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	21.5536668256985	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94744998	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.21	chr3	+	4486	17	NNC	ENSMUSG00000038902.15	novel	4775	19	NA	NA	9	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	22.0762174069744	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94745032	94788195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.22	chr3	+	2390	1	Intergenic	novelGene_18186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTATTGG	NA	False	NA	NA	False	NA	NA	NA	94758263	94760653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94758300_94760700
ES.22029.23	chr3	+	4783	18	ISM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	16381	1444	-9780	7	3prime_fragment	FALSE	canonical	3	43	junction_4	11.9125998254821	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCACTGAACTCTTTCC	NA	False	NA	75	True	TATAAA	-18	NA	94761258	94788193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.25	chr3	+	4575	18	NNC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-9710	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.0017300250434	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCACTGAACTCTTTCC	NA	False	NA	75	True	TATAAA	-18	NA	94761328	94788193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784362_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.26	chr3	+	4632	15	NIC	ENSMUSG00000038902.15	novel	4100	18	NA	NA	-2917	5	intron_retention	FALSE	canonical	3	43	junction_2	11.7924223334223	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCCCACTGAACTCTTT	NA	False	NA	73	True	TATAAA	-16	NA	94768121	94788191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.27	chr3	+	5225	14	ISM	ENSMUSG00000038902.15	ENSMUST00000107266.8	4100	18	25342	-530	-673	-13	3prime_fragment	FALSE	canonical	3	52	junction_1	8.91976065696355	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94770365	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.28	chr3	+	3904	13	ISM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	26742	13	-64	-13	3prime_fragment	FALSE	canonical	3	58	junction_7	7.98392482151201	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94771765	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.29	chr3	+	4711	10	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	34559	-2	960	0	3prime_fragment	FALSE	canonical	3	58	junction_4	8.65098295992077	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94779582	94789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.3	chr3	+	5129	19	FSM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	-345	-9	-199	9	multi-exon	FALSE	canonical	3	5	junction_6	17.676796536773	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94744678	94788195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.30	chr3	+	4467	5	ISM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	37688	-9	-2254	9	intron_retention	FALSE	canonical	3	58	junction_1	7.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94782711	94788195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466
ES.22029.31	chr3	+	3367	5	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	39533	623	-409	-623	3prime_fragment	FALSE	canonical	3	71	junction_1	4.12310562561766	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTCTATGTGTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	94784556	94789012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.33	chr3	+	2583	4	ISM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	39592	13	-350	-13	intron_retention	FALSE	canonical	3	71	junction_1	4.32049379893857	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94784615	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94784688_94785241_94785299_94785466_94785580_94785832
ES.22029.34	chr3	+	3933	4	FSM	ENSMUSG00000038902.15	ENSMUST00000142253.2	777	4	202	-3358	202	0	multi-exon	FALSE	canonical	3	79	junction_1	0.942809041582063	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGTTAAGTATA	NA	False	NA	14	True	AATAAA	-16	NA	94785167	94789635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.35	chr3	+	3804	3	ISM	ENSMUSG00000038902.15	ENSMUST00000142253.2	777	4	499	-3358	499	0	3prime_fragment	FALSE	canonical	3	81	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGTTAAGTATA	NA	False	NA	14	True	AATAAA	-16	NA	94785464	94789635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94785580_94785832_94785858_94785971
ES.22029.36	chr3	+	3789	1	Genic_Genomic	ENSMUSG00000038902.15	novel	NA	NA	NA	NA	2622	1739	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAATAATTGAGAAAGAC	857	False	NA	NA	False	NA	NA	NA	94787587	94791376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_94787600_94791400
ES.22029.4	chr3	+	6581	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-182	0	-182	0	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94744695	94789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.22029.5	chr3	+	5135	18	NNC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-176	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	17.3857118283534	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTGAACTCTTTCCTT	NA	False	NA	77	True	TATAAA	-20	NA	94744701	94788195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.6	chr3	+	6575	18	NNC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	17.3857118283534	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94744703	94789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.7	chr3	+	5157	19	NNC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-169	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.4725217537477	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATGAAAATGAAAAA	NA	False	NA	53	True	NA	NA	NA	94744708	94788171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94767903_94767957_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785944
ES.22029.8	chr3	+	5132	19	NNC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-161	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.8270151493682	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAATGAAAAATG	NA	False	NA	55	True	NA	NA	NA	94744716	94788173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785796_94785858_94785971
ES.22029.9	chr3	+	8058	15	NIC	ENSMUSG00000038902.15	novel	6399	19	NA	NA	-161	0	intron_retention	FALSE	canonical	3	5	junction_5	23.4990229931513	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94744716	94789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ES.2203.1	chr1	-	182	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAACCTTTTAAATAT	NA	False	NA	NA	False	NA	NA	NA	191066346	191066164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_191066200_191066300
ES.22030.1	chr3	-	4933	2	Antisense	novelGene_ENSMUSG00000038902.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTATATTTGTCTGTGT	NA	False	NA	NA	False	TATAAA	-15	NA	94788371	94781001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_94782603_94785039
ES.22031.1	chr3	-	960	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	-3	226	-3	3	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGATTTTGTGTTTTGA	NA	False	NA	0	True	AATAAA	-24	NA	94794275	94791629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ES.22031.2	chr3	-	1177	6	NIC	ENSMUSG00000005779.13	novel	1183	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	1712	junction_3	86.6316339451127	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGAGTTGGATTTTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	94794267	94791634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ES.22031.3	chr3	-	812	7	NNC	ENSMUSG00000005779.13	novel	1183	7	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	673.124720158819	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAGTTGGATTTTGT	NA	False	NA	-7	True	AATAAA	-17	NA	94794283	94791636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794228
ES.22031.4	chr3	-	377	5	NNC	ENSMUSG00000005779.13	novel	1183	7	NA	NA	-49	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	781.039171552874	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTCGCTGAGTTGGAT	NA	False	NA	-12	True	AATAAA	-12	NA	94794222	94791641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94792993_94794183
ES.22032.1	chr3	-	173	1	Intergenic	novelGene_18187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGGATTGTATAC	NA	False	NA	NA	False	NA	NA	NA	94795746	94795573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94795600_94795700
ES.22033.1	chr3	-	178	1	Intergenic	novelGene_18188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATTCAAATGCA	NA	False	NA	NA	False	NA	NA	NA	94809361	94809183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94809200_94809400
ES.22034.1	chr3	-	174	1	Intergenic	novelGene_18189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	94820044	94819870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94819900_94820000
ES.22035.1	chr3	-	179	1	Intergenic	novelGene_18190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATACAACAATAACA	7797	False	NA	0	True	NA	NA	NA	94830550	94830371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94830400_94830600
ES.22036.1	chr3	+	180	1	Intergenic	novelGene_18191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	94835738	94835918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94835700_94835900
ES.22037.1	chr3	+	1705	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	5	2	-5	-2	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAGATCACTCTGTGA	2659	False	NA	NA	False	AATAAA	-12	NA	94840371	94852067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
ES.22038.1	chr3	-	211	1	Intergenic	novelGene_18192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGACCCCAGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	94842668	94842457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94842500_94842700
ES.22039.1	chr3	+	4139	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	-45	10	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTTTGTGGACATAA	NA	False	NA	14	True	NA	NA	NA	94861340	94868670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.10	chr3	+	4441	9	FSM	ENSMUSG00000005774.13	ENSMUST00000107253.8	4367	9	-64	-10	2	10	multi-exon	FALSE	canonical	3	32	junction_7	4.47213595499958	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCTTTGTGGACATAA	NA	False	NA	14	True	NA	NA	NA	94861472	94868670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092
ES.22039.11	chr3	+	3990	11	NNC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	11.798728745081	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861477	94868659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560_94865839_94865909
ES.22039.12	chr3	+	4083	11	NNC	ENSMUSG00000005774.13	novel	4189	9	NA	NA	-73	-1	intron_retention	FALSE	canonical	0	0	junction_1	15.0877433700338	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861621	94868659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94861702_94862073_94862101_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.13	chr3	+	4196	10	NNC	ENSMUSG00000005774.13	novel	4189	9	NA	NA	-12	8	intron_retention	FALSE	canonical	0	0	junction_1	12.3268251096521	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCTTTGTGGACAT	NA	False	NA	12	True	NA	NA	NA	94861682	94868668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94861863_94862294_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.2	chr3	+	4173	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	-44	204	-11	8	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCTTTGTGGACAT	NA	False	NA	12	True	NA	NA	NA	94861374	94868668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.3	chr3	+	4100	11	NNC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_10	11.798728745081	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGAGCCTTATGTTTC	NA	False	NA	1	True	NA	NA	NA	94861376	94868657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560_94865843_94865902
ES.22039.4	chr3	+	4110	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	5	junction_2	10.6666666666667	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861418	94868659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94861563_94862325_94862448_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.5	chr3	+	4034	10	FSM	ENSMUSG00000005774.13	ENSMUST00000144132.8	4014	10	-27	7	0	-4	multi-exon	FALSE	canonical	2	5	junction_2	12.4810968178994	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATCTGAGCCTTATG	NA	False	NA	-3	True	NA	NA	NA	94861418	94868653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94861493_94862325_94862448_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.6	chr3	+	3866	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	-182	intron_retention	FALSE	canonical	3	11	junction_1	9.15302014516399	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTGTATATGAGTGCC	NA	False	NA	NA	False	NA	NA	NA	94861418	94868475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94861493_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.7	chr3	+	4967	8	ISM	ENSMUSG00000005774.13	ENSMUST00000107253.8	4367	9	-118	1	0	-1	intron_retention	FALSE	canonical	3	32	junction_7	4.33307168231517	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGCCTTATGTTTCTT	NA	False	NA	3	True	NA	NA	NA	94861418	94868659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407
ES.22039.8	chr3	+	4690	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	0	-357	0	357	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTAAAGGTCTGAT	NA	False	NA	NA	False	CATAAA	-18	NA	94861418	94869229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.22039.9	chr3	+	4057	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_1	12.0318507345614	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTGAGCCTTATGTT	NA	False	NA	-1	True	NA	NA	NA	94861418	94868655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_94861504_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ES.2204.1	chr1	-	3140	14	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	-34	683	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.99891897481	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGTTGCCTTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	191129272	191083488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191083506_191084170_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ES.2204.10	chr1	-	5895	4	NIC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	-3327	-3	intron_retention	FALSE	canonical	3	353	junction_1	7.1336448530109	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCATTTGCTCTTTTG	6268	False	NA	-7	True	AATAAA	-21	NA	191091989	191084174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191087059_191087219_191087271_191088530_191088585_191089083
ES.2204.11	chr1	-	3240	13	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	57	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	163.8258518129	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTCATTTGCTCTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	191129181	191084175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191085307_191086070_191086263_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091266_191094445_191094539_191100837_191100940_191104666_191104864_191128322
ES.2204.18	chr1	-	2906	12	NIC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	41	-13	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	111.079377470229	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGCCTTATGTCATT	NA	False	NA	-17	True	AATAAA	-11	NA	191129197	191084184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191085307_191086070_191086173_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ES.2204.19	chr1	-	2143	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-39	984	-39	-984	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTCGTTTTGTACACT	NA	False	NA	NA	False	AATAAA	-18	NA	191129277	191085155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ES.2204.2	chr1	-	3273	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-180	-5	-180	5	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTTTGTCTCTGGA	NA	False	NA	1	True	AATAAA	-29	NA	191129418	191084166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ES.2204.20	chr1	-	154	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAAATCTTTTTA	4879	False	NA	NA	False	NA	NA	NA	191093378	191093224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_191093200_191093400
ES.2204.21	chr1	-	2340	2	ISM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	-14	19172	-14	1424	5prime_fragment	FALSE	canonical	3	359	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTAATTTCTAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	191129252	191103343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191104864_191128432
ES.2204.22	chr1	-	2126	2	ISM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	35	19337	35	1259	5prime_fragment	FALSE	canonical	3	359	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGATTTCCTGTGGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	191129203	191103508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191104864_191128432
ES.2204.23	chr1	-	4039	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	2180	False	NA	NA	False	NA	NA	NA	191109785	191105746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_191105700_191109800
ES.2204.4	chr1	-	3344	5	NIC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	-913	-1	intron_retention	FALSE	canonical	3	325	junction_2	26.1856353751441	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	8682	False	NA	-5	True	AATAAA	-23	NA	191089575	191084172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530
ES.2204.5	chr1	-	3040	13	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	108.221320296264	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	191129252	191084172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104727_191104864_191128432
ES.2204.6	chr1	-	2945	12	NIC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	40	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	109.970619667631	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	191129198	191084172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191104666_191104864_191128432
ES.2204.7	chr1	-	3221	14	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	138.01959384096	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	191129181	191084172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191114119_191114311_191128432
ES.2204.8	chr1	-	3056	13	NNC	ENSMUSG00000026626.12	novel	3088	13	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	107.943915478775	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	False	NA	-5	True	AATAAA	-23	NA	191129194	191084172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091266_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ES.22040.1	chr3	-	175	1	Intergenic	novelGene_18193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTTGGAACT	NA	False	NA	NA	False	NA	NA	NA	94871129	94870954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94871000_94871100
ES.22041.1	chr3	+	181	1	Intergenic	novelGene_18195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94876140	94876321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94876100_94876300
ES.22042.1	chr3	+	240	1	Intergenic	novelGene_18196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCAACACTTGGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	94879600	94879840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94879600_94879800
ES.22043.1	chr3	-	8048	1	Intergenic	novelGene_18194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTATGTCTCGTGTT	5056	False	NA	NA	False	AATAAA	-30	NA	94881894	94873846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94873800_94881900
ES.22044.1	chr3	+	3493	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	-19	218	-19	-156	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTGCTTCTGGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	94882022	94913936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22044.11	chr3	+	3191	11	NNC	ENSMUSG00000038861.15	novel	3692	11	NA	NA	103	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.8558739860041	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882289	94913932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912035_94913069
ES.22044.12	chr3	+	2096	1	Intergenic	novelGene_18197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTATGCACGTGCCTT	5432	False	NA	NA	False	ATTAAA	-15	NA	94892414	94894510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94892400_94894500
ES.22044.13	chr3	+	2007	1	Antisense	novelGene_ENSMUSG00000086288.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACCAGGAACAATGCCTT	NA	False	NA	NA	False	NA	NA	NA	94908748	94910755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_94908700_94910800
ES.22044.2	chr3	+	5217	1	Genic_Genomic	ENSMUSG00000038861.15	novel	NA	NA	NA	NA	-16	-16013	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAGTGGTGGCGCACGC	NA	False	NA	NA	False	NA	NA	NA	94882025	94887242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_94882000_94887200
ES.22044.3	chr3	+	3789	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	-6	-91	-6	91	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCTCCTCTCCCTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	94882035	94914245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22044.4	chr3	+	2526	10	FSM	ENSMUSG00000038861.15	ENSMUST00000167008.8	1962	10	-93	-471	7	-160	multi-exon	FALSE	canonical	0	0	junction_1	11.4611528517579	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882048	94913932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22044.5	chr3	+	3182	8	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	209	6692	64	4207	5prime_fragment	FALSE	canonical	3	27	junction_2	4.7723694538543	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGGAAGATGAAATTCT	NA	False	NA	NA	False	NA	NA	NA	94882250	94907462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158
ES.22044.6	chr3	+	4524	9	ISM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	211	222	66	-160	intron_retention	FALSE	canonical	3	26	junction_8	5.14174095030078	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882252	94913932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550
ES.22044.7	chr3	+	3290	12	FSM	ENSMUSG00000038861.15	ENSMUST00000107251.9	2895	12	80	-475	80	-160	multi-exon	FALSE	canonical	2	3	junction_2	12.4389417848655	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTCTTGTTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	94882266	94913932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94891293_94892231_94896613_94896659_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22044.8	chr3	+	2713	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	230	749	85	-52	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTGCCAGAGGGTAGG	NA	False	NA	NA	False	AATACA	-22	NA	94882271	94913405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22044.9	chr3	+	2537	10	FSM	ENSMUSG00000038861.15	ENSMUST00000167008.8	1962	10	130	-705	85	12	multi-exon	FALSE	canonical	0	0	junction_1	11.4611528517579	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTCTGGTTTTCTCCCT	NA	False	NA	NA	False	ATTAAA	-15	NA	94882271	94914166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_94882397_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ES.22045.1	chr3	-	4759	4	Fusion	ENSMUSG00000086288.2_ENSMUSG00000084846.2_ENSMUSG00000019338.14	novel	1601	2	NA	NA	-2351	-263	intron_retention	FALSE	canonical	0	0	junction_1	0.942809041582063	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTACTGTCCTCAATCAA	NA	False	NA	NA	False	AATATA	-20	NA	94914531	94901983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94903423_94904129_94904281_94906140_94906312_94911533
ES.22045.10	chr3	-	2546	2	ISM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	6024	-138	2593	26	intron_retention	FALSE	canonical	3	126	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94916525	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_94915278_94915382
ES.22045.11	chr3	-	6088	2	NIC	ENSMUSG00000019338.14	novel	862	3	NA	NA	-46	26	intron_retention	FALSE	canonical	3	70	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922805	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94919788_94922630
ES.22045.12	chr3	-	4770	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	0	-138	0	26	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922549	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
ES.22045.14	chr3	-	5531	6	NIC	ENSMUSG00000019338.14	novel	4617	8	NA	NA	3	26	intron_retention	FALSE	canonical	3	70	junction_5	26.7402318613732	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922745	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94916550_94916653_94917534_94917655_94919788_94922630
ES.22045.15	chr3	-	5048	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-78	24	intron_retention	FALSE	canonical	3	35	junction_8	38.7290265821386	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTTTCCCTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	94922837	94913876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
ES.22045.17	chr3	-	4942	8	FSM	ENSMUSG00000019338.14	ENSMUST00000147022.8	4617	8	-94	-231	-50	-11	multi-exon	FALSE	canonical	3	70	junction_7	24.2924360445714	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	99	True	NA	NA	NA	94922809	94913911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.18	chr3	-	4738	9	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-9	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.7458098596952	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	99	True	NA	NA	NA	94922768	94913911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916822_94917350_94917534_94917655_94919788_94922630
ES.22045.19	chr3	-	4782	8	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	13	-11	intron_retention	FALSE	canonical	3	70	junction_7	24.8407170687522	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	99	True	NA	NA	NA	94922702	94913911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.2	chr3	-	2554	4	Fusion	ENSMUSG00000086288.2_ENSMUSG00000084846.2	novel	1601	2	NA	NA	-516	0	intron_retention	FALSE	canonical	0	0	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCACTTCCTCCAGGA	NA	False	NA	NA	False	NA	NA	NA	94912696	94902353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94903423_94904129_94904281_94906140_94906312_94911533
ES.22045.20	chr3	-	4752	11	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.9583152331272	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAATTAAAAAAAAA	NA	False	NA	99	True	NA	NA	NA	94922761	94913911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919581_94919660_94919788_94921143_94921240_94922630
ES.22045.21	chr3	-	4738	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGTTTGGTGCCTT	NA	False	NA	-1	True	AAAAAG	-14	NA	94922767	94914011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
ES.22045.22	chr3	-	4666	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGTTTGGTGCCTT	NA	False	NA	-1	True	AAAAAG	-14	NA	94922791	94914011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.23	chr3	-	4557	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922812	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.24	chr3	-	4641	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-41	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922800	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
ES.22045.26	chr3	-	4385	8	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.7179989786745	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922758	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915900_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.27	chr3	-	4083	10	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	43.6978966637927	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922790	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919158_94919609_94919788_94922630
ES.22045.28	chr3	-	4167	10	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-3	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	43.6978966637927	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922751	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94918784_94919112_94919788_94922630
ES.22045.29	chr3	-	4503	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	0	129	0	1	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTTTTCTTTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	94922549	94914141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
ES.22045.3	chr3	-	3710	4	Fusion	ENSMUSG00000086288.2_ENSMUSG00000084846.2_ENSMUSG00000019338.14	novel	814	2	NA	NA	-2004	-329	intron_retention	FALSE	canonical	0	0	junction_1	0.942809041582063	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTCTCTGTCCTTCCT	NA	False	NA	NA	False	TATAAA	-18	NA	94914184	94902682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94903420_94904129_94904281_94906140_94906312_94911533
ES.22045.30	chr3	-	5981	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	54	junction_8	27.8093397080909	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922750	94914142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143
ES.22045.31	chr3	-	5425	4	NIC	ENSMUSG00000019338.14	novel	5208	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	70	junction_3	26.5873821368124	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922734	94914142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915525_94915690_94916229_94916386_94919788_94922630
ES.22045.32	chr3	-	5105	9	NIC	ENSMUSG00000019338.14	novel	4617	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	35	junction_8	37.5979969546251	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922741	94914142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94917534_94917655_94919788_94921143_94921240_94922630
ES.22045.33	chr3	-	4562	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922513	94914142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
ES.22045.34	chr3	-	4419	9	NNC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.3477008599132	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGCTTTTCTTTTTA	NA	False	NA	-2	True	ATTAAA	-21	NA	94922749	94914143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916477_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.4	chr3	-	2106	4	Fusion	ENSMUSG00000086288.2_ENSMUSG00000084846.2	novel	814	2	NA	NA	-401	-333	intron_retention	FALSE	canonical	0	0	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGAAGTCTCTGTCCT	NA	False	NA	NA	False	TATAAA	-14	NA	94912581	94902686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_94903423_94904129_94904281_94906140_94906312_94911533
ES.22045.5	chr3	-	5098	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-31	322	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCCCTGAGGGGAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	94922790	94913578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.6	chr3	-	4836	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	10	26	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922519	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
ES.22045.7	chr3	-	4916	9	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-145	26	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922904	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
ES.22045.9	chr3	-	4907	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	-40	26	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCCTGGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	94922799	94913874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
ES.22046.1	chr3	+	214	1	Intergenic	novelGene_18198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGAAGACTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	94928495	94928709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94928500_94928700
ES.22047.1	chr3	+	3233	1	Intergenic	novelGene_18199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGGTCCTCAGCAAAGC	3338	False	NA	NA	False	NA	NA	NA	94936442	94939675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94936400_94939700
ES.22048.1	chr3	+	170	1	Intergenic	novelGene_18200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATACATCTTTAAAAA	8257	False	NA	NA	False	NA	NA	NA	94941361	94941531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94941400_94941500
ES.22049.1	chr3	+	2538	1	Antisense	novelGene_ENSMUSG00000005625.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAGATTTATTTTAT	8698	False	NA	NA	False	NA	NA	NA	94941802	94944340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_94941800_94944300
ES.2205.1	chr1	-	6879	17	Fusion	ENSMUSG00000037474.14_ENSMUSG00000102246.2	novel	4212	15	NA	NA	-4	129675	multi-exon	FALSE	canonical	0	0	junction_1	166.146384534091	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTCGCCAGCTCCA	NA	False	NA	NA	False	AATAAA	-7	NA	191307660	191138321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_191138525_191266869_191267707_191267853_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.11	chr1	-	4199	15	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	124.936249049388	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGGAAGAGTGTGTT	NA	False	NA	-6	True	NA	NA	NA	191307650	191269476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300517_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.12	chr1	-	8809	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	4	-1	intron_retention	FALSE	canonical	3	463	junction_6	27.7326629034425	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307652	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.13	chr1	-	4196	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	130.983894476554	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307656	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295274_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.14	chr1	-	4294	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-1	intron_retention	FALSE	canonical	3	463	junction_7	26.3380391770592	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307656	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.15	chr1	-	4195	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	128.994245244206	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307647	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278725_191280403_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.16	chr1	-	4204	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	129.523853291309	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307655	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302696_191302817_191307460
ES.2205.19	chr1	-	4129	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_7	131.601019761881	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307648	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.2	chr1	-	2639	3	Fusion	ENSMUSG00000037474.14_ENSMUSG00000102246.2	novel	4212	15	NA	NA	-4536	420	multi-exon	FALSE	non_canonical	0	0	junction_1	234.5	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	7288	False	NA	NA	False	NA	NA	NA	191273540	191267576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_191269001_191270963_191271454_191272815
ES.2205.20	chr1	-	4196	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	170.498204550963	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307659	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280418_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300517_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.21	chr1	-	9428	14	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_3	133.253462270594	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTGGAAGAGTGTGT	NA	False	NA	-7	True	NA	NA	NA	191307622	191269477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191279385_191280407_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.22	chr1	-	4191	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	175.829767510672	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGTGGAAGAGTGTG	NA	False	NA	-8	True	NA	NA	NA	191307631	191269478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191292240_191292321_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.23	chr1	-	3810	11	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	148.524610755255	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGTGGAAGAGTGTG	NA	False	NA	-8	True	NA	NA	NA	191307664	191269478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191307460
ES.2205.24	chr1	-	5220	13	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	-3	intron_retention	FALSE	canonical	2	13	junction_7	136.882832094541	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTTGTGGAAGAGTGT	NA	False	NA	-9	True	NA	NA	NA	191307631	191269479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191301878_191302690_191302817_191307460
ES.2205.25	chr1	-	4260	16	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	171.024546646251	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTTGTGGAAGAGTGT	NA	False	NA	-9	True	NA	NA	NA	191307638	191269479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191286296_191286366_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.26	chr1	-	3078	5	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	223.130567157438	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTTGTGGAAGAGTGT	NA	False	NA	-9	True	NA	NA	NA	191307656	191269479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280463_191307573
ES.2205.27	chr1	-	4279	16	NNC	ENSMUSG00000037474.14	novel	4230	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.024546646251	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTTGTGGAAGAGTGT	NA	False	NA	-9	True	NA	NA	NA	191307624	191269479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271103_191271191_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285404_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.28	chr1	-	9965	9	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	10576	-4	intron_retention	FALSE	canonical	3	463	junction_6	26.5962285860232	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTTTGTGGAAGAGTG	NA	False	NA	-10	True	NA	NA	NA	191297047	191269480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222
ES.2205.29	chr1	-	4133	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	-29	108	-29	-108	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTTGCTGTGCTGCTTT	NA	False	NA	12	True	AATAAA	-42	NA	191307685	191269584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.3	chr1	-	5703	15	FSM	ENSMUSG00000037474.14_ENSMUSG00000102246.2	ENSMUST00000027933.11	4212	15	-8	-1483	-8	3	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTGTTGAGTTGAAT	NA	False	NA	NA	False	AATATA	-21	NA	191307664	191267993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.30	chr1	-	3870	13	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-125	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	141.412124264113	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307622	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191301778_191301878_191302690_191302817_191307460
ES.2205.31	chr1	-	8689	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-125	intron_retention	FALSE	canonical	3	463	junction_6	27.7326629034425	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307656	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.32	chr1	-	5174	14	NIC	ENSMUSG00000037474.14	novel	4230	16	NA	NA	0	-125	intron_retention	FALSE	canonical	3	463	junction_7	27.1940212712171	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307633	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191301878_191302690_191302817_191307460
ES.2205.33	chr1	-	4011	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	-125	combination_of_known_splicesites	FALSE	canonical	2	13	junction_7	131.601019761881	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307654	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.34	chr1	-	4070	15	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	10	-125	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	124.936249049388	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307646	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300517_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.35	chr1	-	4117	16	FSM	ENSMUSG00000037474.14	ENSMUST00000195650.6	4230	16	-21	134	2	-125	multi-exon	FALSE	canonical	0	0	junction_10	170.83122275119	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAAGATGGCTTGGGTT	NA	False	NA	-5	True	AATAAA	-25	NA	191307654	191269601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191297430_191297463_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.37	chr1	-	4094	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	458	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	129.578831100561	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307165	191269604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191306959
ES.2205.38	chr1	-	3983	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	-128	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	134.313375507567	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307654	191269604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191302690_191302817_191307460
ES.2205.39	chr1	-	3817	12	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-9	-128	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	146.535810645906	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307642	191269604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.4	chr1	-	2539	1	FSM	ENSMUSG00000102246.2	ENSMUST00000192556.2	1008	1	-1673	142	-1673	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGATCATTGTTTCTCT	6944	False	NA	NA	False	NA	NA	NA	191270677	191268138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191268100_191270700
ES.2205.40	chr1	-	4068	15	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	130.983894476554	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307655	191269604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295274_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.41	chr1	-	3415	8	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	8	-128	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	177.309829141546	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307648	191269604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191307460
ES.2205.43	chr1	-	3254	7	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	186.293153091811	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTTTAAGATGGCTT	NA	False	NA	-10	True	AATAAA	-20	NA	191307626	191269606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.47	chr1	-	3821	13	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	138.222721841719	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAATGTTTAAGATGGC	NA	False	NA	-12	True	AATAAA	-18	NA	191307622	191269608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191307460
ES.2205.49	chr1	-	3644	11	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	-135	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	148.524610755255	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCAAATGTTTAAGAT	NA	False	NA	-15	True	AATAAA	-15	NA	191307631	191269611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191307460
ES.2205.5	chr1	-	4929	15	Fusion	ENSMUSG00000037474.14_ENSMUSG00000102246.2	novel	4212	15	NA	NA	2	-723	multi-exon	FALSE	canonical	0	0	junction_10	130.983894476554	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTCCAAGACTTTTT	NA	False	NA	NA	False	NA	NA	NA	191307631	191268719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295274_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.51	chr1	-	5214	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	-137	intron_retention	FALSE	canonical	3	466	junction_10	26.0329786296413	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACCTCAAATGTTTAAG	NA	False	NA	-17	True	AATAAA	-13	NA	191307622	191269613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.54	chr1	-	3494	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	25	693	2	-693	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAAGTGTTGGGTTTCT	NA	False	NA	NA	False	TATAAA	-21	NA	191307631	191270169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.55	chr1	-	3295	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	1	916	1	824	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAAATGAGCATCATAT	NA	False	NA	NA	False	NA	NA	NA	191307655	191270392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.56	chr1	-	2829	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	-23	1406	-23	334	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATATTGTCTTCATGTA	NA	False	NA	77	True	GATAAA	-22	NA	191307679	191270882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.57	chr1	-	3540	13	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	330	intron_retention	FALSE	canonical	2	13	junction_7	135.456224991282	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTCATATTGTCTTCA	NA	False	NA	73	True	GATAAA	-18	NA	191307655	191270886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191302817_191307460
ES.2205.58	chr1	-	7379	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	2	330	intron_retention	FALSE	canonical	3	463	junction_6	27.7326629034425	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTCATATTGTCTTCA	NA	False	NA	73	True	GATAAA	-18	NA	191307631	191270886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.59	chr1	-	6223	9	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	11526	256	intron_retention	FALSE	canonical	3	463	junction_7	25.4165300542777	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTGTGTGTGTGT	NA	False	NA	-1	True	AATATA	-16	NA	191296097	191270960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191293650_191295222
ES.2205.6	chr1	-	4990	15	FSM	ENSMUSG00000037474.14_ENSMUSG00000102246.2	ENSMUST00000027933.11	4212	15	-24	-754	-24	-726	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGTTCCAAGACTT	NA	False	NA	NA	False	NA	NA	NA	191307680	191268722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.61	chr1	-	2640	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	254	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	135.882519742598	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTGTGTGTGTGTGT	NA	False	NA	-3	True	AATATA	-14	NA	191307632	191270962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191301778_191301878_191302690_191302817_191307460
ES.2205.62	chr1	-	4331	11	ISM	ENSMUSG00000037474.14	ENSMUST00000195765.6	3174	15	-5	10706	2	18	5prime_fragment	FALSE	canonical	3	463	junction_3	24.609144641779	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGGTCATGTGATACTT	NA	False	NA	NA	False	NA	NA	NA	191307631	191281922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.63	chr1	-	3873	4	NIC	ENSMUSG00000037474.14	novel	4300	11	NA	NA	14025	18	intron_retention	FALSE	canonical	3	463	junction_2	22.939534045447	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGGTCATGTGATACTT	NA	False	NA	NA	False	NA	NA	NA	191293598	191281922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191285213_191288552_191289000_191290172_191290247_191293536
ES.2205.64	chr1	-	5694	11	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	1	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	149.832740080398	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGGTCATGTGATACTT	NA	False	NA	NA	False	NA	NA	NA	191307622	191281922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191294273_191294473_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.65	chr1	-	6084	5	NNC	ENSMUSG00000037474.14	novel	4300	11	NA	NA	18387	18	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	213.042249330972	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGGTCATGTGATACTT	NA	False	NA	NA	False	NA	NA	NA	191289236	191281922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191285386_191285581_191286374_191286584_191287505_191288089_191288658_191288895
ES.2205.66	chr1	-	1213	11	NNC	ENSMUSG00000037474.14	novel	1787	7	NA	NA	0	-4461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.69502329737	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	191307626	191286401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191286579_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.7	chr1	-	4658	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	-435	-11	-435	2	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTTACTGGGGGTGA	10017	False	NA	5	True	NA	NA	NA	191308091	191269465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.2205.9	chr1	-	4278	17	NNC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	195.291518873068	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGAGTGTGTTACTG	NA	False	NA	-2	True	NA	NA	NA	191307664	191269472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191282188_191282215_191284689_191284718_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ES.22050.1	chr3	-	3518	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	43	-2229	-19	2229	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGACTTTATGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	94949882	94937775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.11	chr3	-	1247	10	NNC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	684.499492735791	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGCTTCAAATAGTGA	NA	False	NA	-18	True	AATAAA	-17	NA	94949856	94940012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942314_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.13	chr3	-	1459	11	NNC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	827.338044574284	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949856	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949122_94949319_94949818
ES.22050.14	chr3	-	2296	8	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1001	junction_2	372.52935783503	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949862	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940858_94940943_94941076_94941228_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.15	chr3	-	1979	8	NIC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	-10	1	intron_retention	FALSE	canonical	3	876	junction_3	416.710049442202	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949873	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.16	chr3	-	1216	10	NNC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	679.878002854506	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949873	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944002_94949818
ES.22050.17	chr3	-	2339	8	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-14	1	intron_retention	FALSE	canonical	3	15	junction_6	725.512176581032	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949877	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940858_94940943_94941076_94941228_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943887_94944057_94949818
ES.22050.19	chr3	-	1210	10	NNC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	668.794788508256	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949874	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943977_94944057_94949818
ES.22050.2	chr3	-	1307	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	28	-3	28	3	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGATAGCTTTGCAC	NA	False	NA	-7	True	AATAAA	-28	NA	94949897	94940001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.20	chr3	-	1298	10	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	664.667966862282	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGCTTCAAATAGTG	NA	False	NA	-19	True	AATAAA	-16	NA	94949872	94940013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943887_94944057_94949818
ES.22050.21	chr3	-	1270	10	NNC	ENSMUSG00000005625.16	novel	1756	9	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	690.380589258339	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949889	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940241_94940762_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.22	chr3	-	1961	8	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	1824	junction_4	117.989622511508	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949872	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94940858_94940943_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.23	chr3	-	1787	9	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-30	0	intron_retention	FALSE	canonical	3	1001	junction_2	349.501072959726	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949893	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.24	chr3	-	1235	10	NNC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	907.836255426421	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949867	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940856_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943887_94944002_94949818
ES.22050.25	chr3	-	1274	10	NNC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	699.490149420135	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949875	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942555_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.26	chr3	-	3157	5	NIC	ENSMUSG00000005625.16	novel	2120	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1866	junction_4	110.567852470779	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949859	94940014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940858_94940943_94942093_94942252_94943236_94943915_94944057_94949818
ES.22050.29	chr3	-	2684	6	NIC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	876	junction_3	476.517785607211	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	False	NA	-21	True	AATAAA	-14	NA	94949868	94940015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94943236_94943915_94944057_94949818
ES.22050.3	chr3	-	1882	8	FSM	ENSMUSG00000005625.16	ENSMUST00000136868.2	1626	8	-24	-232	-17	3	multi-exon	FALSE	canonical	3	876	junction_1	401.64727138653	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGATAGCTTTGCAC	NA	False	NA	-7	True	AATAAA	-28	NA	94949880	94940001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.30	chr3	-	3029	5	NIC	ENSMUSG00000005625.16	novel	1756	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1824	junction_2	122.35680406091	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	False	NA	-21	True	AATAAA	-14	NA	94949873	94940015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94942093_94942252_94942322_94942548_94943236_94943915_94944057_94949818
ES.22050.32	chr3	-	1731	8	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	26	junction_1	723.278984760319	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCTTTTGCTTCAAATA	NA	False	NA	-22	True	AATAAA	-13	NA	94949862	94940016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940943_94941076_94941228_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.33	chr3	-	1348	9	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1001	junction_2	342.779812707808	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCTTTTGCTTCAAATA	NA	False	NA	-22	True	AATAAA	-13	NA	94949867	94940016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.34	chr3	-	171	1	Intergenic	novelGene_18201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	94944517	94944346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94944300_94944500
ES.22050.4	chr3	-	1338	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	-56	-6	6	3	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGATAGCTTTGCAC	NA	False	NA	-7	True	AATAAA	-28	NA	94949919	94940001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.5	chr3	-	1830	9	NIC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	-10	2	intron_retention	FALSE	canonical	3	876	junction_3	392.570296252786	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGTGATAGCTTTGCA	NA	False	NA	-8	True	AATAAA	-27	NA	94949873	94940002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.7	chr3	-	1815	9	NNC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_1	708.956804043801	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAATAGTGATAGCTTT	NA	False	NA	-11	True	AATAAA	-24	NA	94949873	94940005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94940293_94940792_94940858_94940943_94941076_94941228_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ES.22050.9	chr3	-	1575	7	ISM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	6629	-6	-647	-2	3prime_fragment	FALSE	canonical	3	876	junction_2	432.203527159241	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTTCAAATAGTGATAG	NA	False	NA	-15	True	AATAAA	-20	NA	94943225	94940009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120
ES.22051.1	chr3	-	197	1	Intergenic	novelGene_18202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTCCACAACATATGTA	NA	False	NA	NA	False	NA	NA	NA	94952904	94952707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94952700_94952900
ES.22052.1	chr3	+	172	1	Intergenic	novelGene_18203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	5632	False	NA	NA	False	NA	NA	NA	94959801	94959973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94959800_94960000
ES.22053.1	chr3	+	140	1	Intergenic	novelGene_18204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTTAGTTAGA	NA	False	NA	NA	False	AATAAA	-4	NA	94973656	94973796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_94973700_94973800
ES.22054.1	chr3	+	3891	2	Antisense	novelGene_ENSMUSG00000028126.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCTCATACCCAGCAGC	1778	False	NA	NA	False	AAAAAG	-12	NA	95008373	95012445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95011657_95011837
ES.22054.2	chr3	+	2990	2	Antisense	novelGene_ENSMUSG00000028126.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	2608	False	NA	NA	False	NA	NA	NA	95009203	95012373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95011666_95011845
ES.22055.1	chr3	-	3614	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	-9	13	-9	0	multi-exon	FALSE	canonical	3	17	junction_14	9.68798961896341	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAATGCTTTTATT	1244	False	NA	-1	True	AATAAA	-44	NA	95014195	94965853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ES.22055.10	chr3	-	3923	14	NIC	ENSMUSG00000028126.17	novel	3663	15	NA	NA	19	-1	intron_retention	FALSE	canonical	3	28	junction_13	7.88752291606682	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	1217	False	NA	-28	True	AATAAA	-17	NA	95014222	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
ES.22055.11	chr3	-	5749	11	NIC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	6	-1	intron_retention	FALSE	canonical	3	17	junction_10	9.51262319236918	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	1278	False	NA	-28	True	AATAAA	-17	NA	95014161	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94967841_94970965_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ES.22055.12	chr3	-	1998	7	NNC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	11658	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.6553639837408	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAAGTTCTAGCAATC	5728	False	NA	-30	True	AATAAA	-15	NA	94974169	94965882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974139
ES.22055.13	chr3	-	3692	16	NNC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	13.9942845476287	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAAGTTCTAGCAATC	1290	False	NA	-30	True	AATAAA	-15	NA	95014149	94965882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95004476_95004630_95013686
ES.22055.14	chr3	-	2128	6	ISM	ENSMUSG00000028126.17	ENSMUST00000005768.8	3480	15	40068	694	11805	-694	3prime_fragment	FALSE	canonical	3	47	junction_2	4.45421149026402	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCATTCTCCAAAGGAG	5875	False	NA	NA	False	TATAAA	-18	NA	94974022	94966573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122
ES.22055.15	chr3	-	174	1	Intergenic	novelGene_18205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	94984134	94983960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94984000_94984100
ES.22055.16	chr3	-	176	1	Intergenic	novelGene_18206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGTTACTAGAA	3988	False	NA	NA	False	NA	NA	NA	94993120	94992944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94992900_94993100
ES.22055.17	chr3	-	174	1	Intergenic	novelGene_18207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	5676	False	NA	NA	False	NA	NA	NA	94997736	94997562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94997600_94997700
ES.22055.18	chr3	-	177	1	Intergenic	novelGene_18208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	5176	False	NA	NA	False	NA	NA	NA	94998236	94998059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_94998100_94998200
ES.22055.19	chr3	-	760	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	-50	14	2	-14	multi-exon	FALSE	canonical	3	23	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGC	1255	False	NA	NA	False	AATAAA	-19	NA	95014184	95004367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95004630_95013686
ES.22055.4	chr3	-	4583	15	NNC	ENSMUSG00000028126.17	novel	3663	15	NA	NA	-7418	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	13.4545720929386	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	5451	False	NA	-28	True	AATAAA	-17	NA	94997961	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_94996459
ES.22055.5	chr3	-	3531	15	NNC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.818803554117	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	1243	False	NA	-28	True	AATAAA	-17	NA	95014196	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971729_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ES.22055.6	chr3	-	2414	7	NNC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	11798	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	19.6553639837408	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	5868	False	NA	-28	True	AATAAA	-17	NA	94974029	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94973585
ES.22055.7	chr3	-	4797	13	NIC	ENSMUSG00000028126.17	novel	3663	15	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	28	junction_12	7.91052393264118	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	1289	False	NA	-28	True	AATAAA	-17	NA	95014150	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
ES.22055.9	chr3	-	3430	14	NIC	ENSMUSG00000028126.17	novel	3618	15	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	14.5011731824925	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTCTAGCAATCAT	1257	False	NA	-28	True	AATAAA	-17	NA	95014182	94965880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ES.22056.1	chr3	+	1345	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	-3	114	-3	-114	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTGTAAGGTTGG	2557	False	NA	49	True	AATAAA	-17	NA	95018329	95030248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ES.22056.10	chr3	+	1296	6	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	15	-117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	439.576796475883	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2595	False	NA	46	True	AATAAA	-14	NA	95018367	95030245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018526_95025535_95025689_95025959_95026075_95026449_95026619_95028572_95028718_95029689
ES.22056.12	chr3	+	1183	6	FSM	ENSMUSG00000008958.15	ENSMUST00000125548.8	956	6	-15	-212	-15	-118	multi-exon	FALSE	canonical	2	4	junction_1	357.37017223042	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2596	False	NA	45	True	AATAAA	-13	NA	95018368	95030244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95018407_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ES.22056.14	chr3	+	2269	5	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	34	-125	intron_retention	FALSE	canonical	0	0	junction_1	386.814797416024	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTTTTTGTCTGATG	2645	False	NA	38	True	AATAAA	-6	NA	95018417	95030237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018526_95025484_95025689_95025959_95026075_95026441_95026619_95028572
ES.22056.15	chr3	+	708	1	NIC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	65	-6532	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCACACTCTCGTTTTC	2676	False	NA	NA	False	NA	NA	NA	95018448	95019156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95018400_95019200
ES.22056.16	chr3	+	822	1	Intergenic	novelGene_18210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95026940	95027762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95026900_95027800
ES.22056.2	chr3	+	1685	5	NIC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	0	-118	intron_retention	FALSE	canonical	0	0	junction_1	388.608012655426	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2580	False	NA	45	True	AATAAA	-13	NA	95018352	95030244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95018526_95025535_95025689_95025959_95026619_95028572_95028718_95029689
ES.22056.3	chr3	+	1483	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	21	-48	1	48	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATCCAGACTAATTTC	2581	False	NA	NA	False	NA	NA	NA	95018353	95030410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ES.22056.4	chr3	+	863	3	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	1	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	454.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2581	False	NA	45	True	AATAAA	-13	NA	95018353	95030244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018530_95028585_95028718_95029689
ES.22056.5	chr3	+	1386	7	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	9	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	388.227489152086	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCTGATGTGTAAGG	2589	False	NA	45	True	AATAAA	-13	NA	95018361	95030244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018526_95022344_95022422_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ES.22056.6	chr3	+	504	3	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	10	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2590	False	NA	46	True	AATAAA	-14	NA	95018362	95030245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018526_95025535_95025689_95030057
ES.22056.7	chr3	+	1507	6	NNC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	10	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	435.136484335662	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGACTAATTTCAGACT	2590	False	NA	NA	False	NA	NA	NA	95018362	95030415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029661
ES.22056.8	chr3	+	2281	5	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	30	117	10	-117	intron_retention	FALSE	canonical	0	0	junction_1	386.814797416024	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2590	False	NA	46	True	AATAAA	-14	NA	95018362	95030245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572
ES.22056.9	chr3	+	2314	5	NIC	ENSMUSG00000008958.15	novel	1456	6	NA	NA	12	-117	intron_retention	FALSE	canonical	0	0	junction_1	386.814797416024	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGATGTGTAAGGT	2592	False	NA	46	True	AATAAA	-14	NA	95018364	95030245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95018561_95025535_95025689_95025959_95026075_95026441_95026619_95028572
ES.22057.1	chr3	+	713	5	NNC	ENSMUSG00000005628.13	novel	942	6	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGTCTCCTTGCCTGGA	2150	False	NA	NA	False	AATAAA	-18	NA	95034937	95036519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95035031_95035114_95035223_95035579_95035724_95035910_95036056_95036296
ES.22058.1	chr3	+	147	1	Antisense	novelGene_ENSMUSG00000092607.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5190	False	NA	NA	False	NA	NA	NA	95037977	95038124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95038000_95038100
ES.22059.1	chr3	+	2426	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	-29	-3	-29	3	multi-exon	FALSE	canonical	1	7	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTAGTGGTTTTATTT	8582	False	NA	20	True	ATTAAA	-16	NA	95041369	95046832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95042308_95044935_95045298_95045706
ES.22059.2	chr3	+	2061	3	NNC	ENSMUSG00000053769.6	novel	2394	3	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTAGTGGTTTTATT	8593	False	NA	19	True	ATTAAA	-15	NA	95041380	95046831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95041955_95044935_95045298_95045706
ES.22059.3	chr3	+	1861	4	NNC	ENSMUSG00000053769.6	novel	2394	3	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.40870359029762	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTAGTGGTTTTATTT	8601	False	NA	20	True	ATTAAA	-16	NA	95041388	95046832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95041553_95042098_95042308_95044935_95045298_95045706
ES.2206.1	chr1	-	149	1	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	191321600	191321451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_191321500_191321600
ES.22060.1	chr3	+	4115	1	FSM	ENSMUSG00000098198.2	ENSMUST00000182930.2	536	1	-3448	-131	-3448	131	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTGCTTTCAAATGC	NA	False	NA	NA	False	AAAAAG	-22	NA	95048233	95052348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95048200_95052300
ES.22061.1	chr3	+	92	1	Intergenic	novelGene_18212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCATCATCTGCCCT	NA	False	NA	NA	False	AATAAA	-22	NA	95052372	95052464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95052400_95052500
ES.22062.1	chr3	+	4165	21	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-37	-4	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	29.5425117415564	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067730	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.10	chr3	+	3961	19	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1451939300196	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAATTTCACATCAGC	NA	False	NA	7	True	AATAAA	-16	NA	95067758	95081323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075899_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078558_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.11	chr3	+	4119	21	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	31.392833577108	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	11	True	AATAAA	-20	NA	95067762	95081327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.13	chr3	+	3579	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	3	junction_11	29.3701893880744	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067763	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076839_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.14	chr3	+	3614	21	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.7261026506177	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTTGTCCTAGAGAG	NA	False	NA	25	True	AATAAA	-34	NA	95067764	95081341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069930_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565_95079888_95080313
ES.22062.15	chr3	+	3895	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	24.8891989067994	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067764	95081336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.16	chr3	+	4126	20	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	32.1154427347633	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067766	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074532_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.17	chr3	+	3707	21	FSM	ENSMUSG00000038777.20	ENSMUST00000090823.8	4029	21	-49	371	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	32.1799238656651	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067766	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95068024_95069925_95069975_95070742_95070833_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.18	chr3	+	3984	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	26.8983929948681	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067766	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.19	chr3	+	4025	20	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	30.4070264514261	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067766	95081333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.2	chr3	+	4072	20	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-31	5	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	28.2846629936582	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTCTTGTCCTAGAGA	NA	False	NA	24	True	AATAAA	-33	NA	95067736	95081340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.20	chr3	+	3984	19	FSM	ENSMUSG00000038777.20	ENSMUST00000142449.9	3936	19	-48	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	29.9223790068921	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067767	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.21	chr3	+	3875	18	NIC	ENSMUSG00000038777.20	novel	3936	19	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	28.2300240179735	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	6	True	AATAAA	-15	NA	95067767	95081322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.22	chr3	+	3911	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	0	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.003967972811	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	6	True	AATAAA	-15	NA	95067767	95081322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.23	chr3	+	3762	18	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	31.3003089850652	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCGCTGCCTGACTTT	NA	False	NA	7	True	AATACA	-10	NA	95067768	95080962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95068758_95068885_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078914_95079565
ES.22062.24	chr3	+	4489	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-4	intron_retention	FALSE	canonical	3	22	junction_1	21.2234208776531	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067768	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.25	chr3	+	3892	21	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.3029153280009	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAATTTCACATCAGC	NA	False	NA	7	True	AATAAA	-16	NA	95067768	95081323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95070742_95070833_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076499_95076621_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.26	chr3	+	3823	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067768	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.27	chr3	+	3873	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	27.5562835925329	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067771	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.28	chr3	+	3980	19	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7417434133007	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAATTTCACATCAGC	NA	False	NA	7	True	AATAAA	-16	NA	95067771	95081323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077272_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.29	chr3	+	4462	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	7	-11	intron_retention	FALSE	canonical	0	0	junction_1	25.2065684643904	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067774	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.3	chr3	+	3638	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-30	2	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	29.1449714853332	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067737	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.30	chr3	+	4027	20	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6359028601707	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067775	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077615_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.31	chr3	+	3545	19	NIC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.003967972811	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067777	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.32	chr3	+	4174	20	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.2251428824608	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067778	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074585_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.33	chr3	+	3501	18	NIC	ENSMUSG00000038777.20	novel	3936	19	NA	NA	18	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	28.2300240179735	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067785	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.34	chr3	+	4288	18	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	18	0	intron_retention	FALSE	canonical	3	22	junction_1	23.8240377578299	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067785	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101
ES.22062.35	chr3	+	3779	18	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	18	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5868902204598	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTCACATCAGCAA	NA	False	NA	9	True	AATAAA	-18	NA	95067785	95081325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95069925_95069975_95074316_95074532_95074723_95074788_95074934_95074992_95075309_95075412_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.36	chr3	+	4507	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-12	-11	intron_retention	FALSE	canonical	3	19	junction_2	24.3473991989055	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067792	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.38	chr3	+	3940	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.745178151571	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	False	NA	13	True	AATAAA	-22	NA	95067794	95081329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.39	chr3	+	3446	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067794	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.4	chr3	+	4668	15	NNC	ENSMUSG00000038777.20	novel	3936	19	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_7	39.3623278928325	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067741	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076121_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644
ES.22062.40	chr3	+	3591	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	26.8983929948681	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067794	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.41	chr3	+	4564	16	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-10	-10	intron_retention	FALSE	canonical	0	0	junction_7	34.3935394450114	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAATTTCACATCAGCAA	NA	False	NA	9	True	AATAAA	-18	NA	95067794	95081325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075703_95075897_95076018_95076119_95076209_95076474_95077025_95077383_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.42	chr3	+	4883	15	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-8	-11	intron_retention	FALSE	canonical	3	17	junction_1	22.2563909647434	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067796	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95071649_95071825_95074316_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.43	chr3	+	4139	19	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-8	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	28.8223592903449	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	6	True	AATAAA	-15	NA	95067796	95081322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079322
ES.22062.44	chr3	+	3683	19	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.0522179292833	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067804	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95071649_95071825_95074316_95074585_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.45	chr3	+	3316	17	NIC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.6296315778417	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCGCTGCCTGACTTT	NA	False	NA	7	True	AATACA	-10	NA	95067804	95080962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.46	chr3	+	3809	19	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	33.318700491903	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067804	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079322
ES.22062.47	chr3	+	3684	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	29.2550743461711	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	False	NA	13	True	AATAAA	-22	NA	95067804	95081329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.48	chr3	+	7210	17	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	39.1969685530654	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067804	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069925_95069975_95070437_95070583_95070742_95070833_95071649_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079322
ES.22062.49	chr3	+	3764	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	29.9333746913913	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067804	95081336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.5	chr3	+	3957	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	-26	-7	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	25.1555653710228	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCACATCAGCAAGTC	NA	False	NA	12	True	AATAAA	-21	NA	95067741	95081328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.50	chr3	+	3220	18	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.373112312654	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067805	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079764
ES.22062.51	chr3	+	3963	21	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.0110208869705	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	11	True	AATAAA	-20	NA	95067805	95081327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95069925_95069975_95070546_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.52	chr3	+	4096	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	22	junction_1	22.2772831321506	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067805	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.54	chr3	+	4639	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-11	intron_retention	FALSE	canonical	2	12	junction_2	28.2360530414225	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067805	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.55	chr3	+	4181	18	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	-11	intron_retention	FALSE	canonical	3	22	junction_1	25.4206139276129	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067805	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.56	chr3	+	4450	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	-12	intron_retention	FALSE	canonical	2	12	junction_2	29.1822053319012	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAATTTCACATCAGC	NA	False	NA	7	True	AATAAA	-16	NA	95067805	95081323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101
ES.22062.57	chr3	+	3879	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-13	intron_retention	FALSE	canonical	0	0	junction_1	26.5882228392572	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGAATTTCACATCAG	NA	False	NA	6	True	AATAAA	-15	NA	95067805	95081322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.58	chr3	+	3574	18	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0782025104458	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067805	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068010_95071649_95071825_95074316_95074585_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.59	chr3	+	3482	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	24.8891989067994	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95067805	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.6	chr3	+	3868	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAAGTCTTGTCCTA	NA	False	NA	20	True	AATAAA	-29	NA	95067742	95081336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.60	chr3	+	4125	19	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	29.32054645542	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTCACATCAGCAAGT	NA	False	NA	11	True	AATAAA	-20	NA	95067805	95081327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079322
ES.22062.61	chr3	+	3666	20	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.1139111612783	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067805	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.62	chr3	+	3593	18	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	28.1497478585203	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067805	95081333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079764
ES.22062.64	chr3	+	3725	21	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	29.5425117415564	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067805	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.65	chr3	+	4123	20	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.6804775554983	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067806	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069925_95069975_95070311_95070583_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.66	chr3	+	3527	19	NIC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	25.1555653710228	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCGCTGCCTGACTTTC	NA	False	NA	8	True	AATACA	-11	NA	95067806	95080963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.67	chr3	+	3405	18	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	27.6033446646996	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCGCTGCCTGACTTT	NA	False	NA	7	True	AATACA	-10	NA	95067815	95080962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078067_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.68	chr3	+	4479	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	-6	intron_retention	FALSE	canonical	2	5	junction_1	27.3066654727148	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	False	NA	13	True	AATAAA	-22	NA	95067815	95081329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.69	chr3	+	3935	18	NNC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.9355566040496	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067817	95081335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068014_95071649_95071825_95074316_95074585_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.7	chr3	+	3983	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-25	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	34.6269359221694	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATCAGCAAGTCTTG	NA	False	NA	15	True	AATAAA	-24	NA	95067742	95081331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95070437_95070583_95071649_95071825_95074316_95074432_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.70	chr3	+	4018	21	NNC	ENSMUSG00000038777.20	novel	4029	21	NA	NA	14	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.1799238656651	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTTCACATCAGCA	NA	False	NA	8	True	AATAAA	-17	NA	95067829	95081324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95068024_95069925_95069975_95070984_95071089_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ES.22062.72	chr3	+	4104	16	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	42	2	intron_retention	FALSE	canonical	0	0	junction_1	25.2718552280332	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTGACTTTCCTC	NA	False	NA	11	True	AATACA	-14	NA	95067857	95080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078701_95078868
ES.22062.74	chr3	+	5113	17	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	913	0	intron_retention	FALSE	canonical	3	19	junction_1	21.7327517815853	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95068728	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868
ES.22062.75	chr3	+	2282	9	NNC	ENSMUSG00000038777.20	novel	3562	19	NA	NA	-670	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.0446459197673	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGCTGCCTGACTTTCC	NA	False	NA	9	True	AATACA	-12	NA	95076963	95080964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078795_95078914_95079101_95079198_95079565
ES.22062.76	chr3	+	6073	5	ISM	ENSMUSG00000038777.20	ENSMUST00000202315.3	2843	17	6390	-4698	-41	3990	3prime_fragment	FALSE	canonical	3	42	junction_4	23.3130864537495	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	95078074	95085325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22062.77	chr3	+	1907	3	ISM	ENSMUSG00000038777.20	ENSMUST00000107217.6	3595	17	7250	6	751	-6	3prime_fragment	FALSE	canonical	3	28	junction_1	2.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	False	NA	13	True	AATAAA	-22	NA	95078866	95081329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95078914_95079101_95079198_95079565
ES.22062.8	chr3	+	3803	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	32.0601726645425	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAGCAAGTCTTGTC	NA	False	NA	17	True	AATAAA	-26	NA	95067752	95081333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95068014_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ES.22063.1	chr3	-	184	1	Intergenic	novelGene_18209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	365	False	NA	NA	False	NA	NA	NA	95015074	95014890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95014900_95015100
ES.22063.10	chr3	-	802	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	150.637534056644	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1276	False	NA	-24	True	AATAAA	-27	NA	95041284	95037030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95037195_95037474_95037640_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.11	chr3	-	828	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.782035475789	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1306	False	NA	-24	True	AATAAA	-27	NA	95041254	95037030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95037195_95037474_95037670_95040135_95040251_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.12	chr3	-	1954	8	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-4534	0	intron_retention	FALSE	canonical	0	0	junction_7	178.354954503424	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTGGAGTCCGGTT	NA	False	NA	-28	True	AATAAA	-23	NA	95045856	95037034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040940_95041155_95042008_95045646_95045712_95045787
ES.22063.14	chr3	-	880	7	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	150.104870747828	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACTGATCCTGGAGTC	1298	False	NA	-33	True	AATAAA	-18	NA	95041262	95037039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95037274_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.15	chr3	-	807	5	ISM	ENSMUSG00000092607.10	ENSMUST00000173462.3	666	6	10	2790	10	-2226	5prime_fragment	FALSE	canonical	3	372	junction_4	25.2623732060153	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTTTCAGGTTTTTT	1248	False	NA	NA	False	NA	NA	NA	95041312	95039829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.16	chr3	-	1149	2	FSM	ENSMUSG00000013707.4	ENSMUST00000013851.4	1122	2	-27	0	-27	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGGCTCACGGTTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	95049698	95046831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95047908_95049625
ES.22063.17	chr3	-	227	1	Intergenic	novelGene_18213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAACAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	95083650	95083423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95083400_95083600
ES.22063.2	chr3	-	175	2	Antisense	novelGene_ENSMUSG00000008958.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	8526	False	NA	NA	False	NA	NA	NA	95028191	95014890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95014945_95028070
ES.22063.3	chr3	-	174	2	Antisense	novelGene_ENSMUSG00000098198.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	281	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	95083647	95014891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95015018_95083599
ES.22063.4	chr3	-	174	1	Antisense	novelGene_ENSMUSG00000008958.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1346	False	NA	NA	False	NA	NA	NA	95024010	95023836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95023800_95024000
ES.22063.5	chr3	-	178	1	Intergenic	novelGene_18211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGT	8522	False	NA	NA	False	NA	NA	NA	95028195	95028017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95028000_95028200
ES.22063.6	chr3	-	933	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	60	61	-12	-61	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTTGCCAAGCGTCAG	1298	False	NA	99	True	NA	NA	NA	95041262	95036907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.7	chr3	-	724	6	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	146.199042404525	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1295	False	NA	-24	True	AATAAA	-27	NA	95041265	95037030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95037195_95037474_95037670_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.8	chr3	-	3069	7	NNC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_2	152.848508879435	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1296	False	NA	-24	True	AATAAA	-27	NA	95041264	95037030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95037195_95037474_95037972_95038180_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22063.9	chr3	-	867	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	3	184	3	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGAGTCCGGTTCCTT	1241	False	NA	-24	True	AATAAA	-27	NA	95041319	95037030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ES.22064.1	chr3	+	932	2	ISM	ENSMUSG00000097167.2	ENSMUST00000181819.2	956	4	24	6866	24	-6866	5prime_fragment	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAACAAAATAATT	270	False	NA	NA	False	ATTAAA	-5	NA	95124791	95127103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95125370_95126749
ES.22064.10	chr3	+	3419	4	ISM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	60	-4	-18	4	intron_retention	FALSE	canonical	3	354	junction_1	38.7240952838869	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	1934	False	NA	25	True	AATAAA	-15	NA	95136102	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798
ES.22064.11	chr3	+	2110	3	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	177	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1987	False	NA	21	True	AATAAA	-11	NA	95136155	95143720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95136177_95139095_95139140_95141675
ES.22064.12	chr3	+	2847	5	NNC	ENSMUSG00000046722.15	novel	907	5	NA	NA	24	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.186871692008	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	2118	False	NA	25	True	AATAAA	-15	NA	95136286	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95136459_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.13	chr3	+	3243	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1518	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	176.329769182631	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	145	False	NA	25	True	AATAAA	-15	NA	95138079	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138648_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.14	chr3	+	3240	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1498	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	174.187399085008	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	165	False	NA	25	True	AATAAA	-15	NA	95138099	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138665_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.15	chr3	+	1698	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1495	212	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	174.187399085008	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTTTTAATTACCCC	168	False	NA	26	True	ATTAAA	-10	NA	95138102	95142185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138665_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.16	chr3	+	1301	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1495	227	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	170.332579091611	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCATCTTGCTATCTCT	168	False	NA	41	True	ATTAAA	-25	NA	95138102	95142200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138253_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.17	chr3	+	3264	4	NNC	ENSMUSG00000046722.15	novel	652	4	NA	NA	-1485	-3	intron_retention	FALSE	canonical	3	16	junction_1	190.694053977103	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAACGGTTTCAGAGTA	178	False	NA	18	True	AATAAA	-8	NA	95138112	95143717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138253_95139095_95139971_95140798_95140891_95141560
ES.22064.18	chr3	+	3240	4	NNC	ENSMUSG00000046722.15	novel	652	4	NA	NA	-1042	4	intron_retention	FALSE	canonical	2	7	junction_1	194.905675192443	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	621	False	NA	25	True	AATAAA	-15	NA	95138555	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95138665_95139095_95139971_95140798_95140891_95141560
ES.22064.19	chr3	+	3013	4	ISM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	2715	-4	-840	4	3prime_fragment	FALSE	canonical	3	380	junction_1	29.2232783924049	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	823	False	NA	25	True	AATAAA	-15	NA	95138757	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.2	chr3	+	3089	6	Fusion	ENSMUSG00000097167.2_ENSMUSG00000046722.15	novel	956	4	NA	NA	299	4	multi-exon	FALSE	canonical	0	0	junction_2	196.812194744127	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCAGAGTAATCACTA	545	False	NA	25	True	AATAAA	-15	NA	95125066	95143724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95125370_95126749_95126861_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.20	chr3	+	3563	2	NIC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-110	0	intron_retention	FALSE	canonical	3	389	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1553	False	NA	21	True	AATAAA	-11	NA	95139487	95143720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95140891_95141560
ES.22064.3	chr3	+	4171	2	NNC	ENSMUSG00000097167.2	novel	956	4	NA	NA	1981	-2747	intron_retention	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTTTAATTTATG	504	False	NA	NA	False	NA	NA	NA	95126748	95131222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95130820_95131122
ES.22064.4	chr3	+	3510	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	-687	-18	-687	18	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACAGATGTGTGTTAC	1187	False	NA	39	True	AATAAA	-29	NA	95135355	95143738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.5	chr3	+	1493	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	-202	1514	-202	233	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTATCTCTGTCTTT	1672	False	NA	47	True	ATTAAA	-31	NA	95135840	95142206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.6	chr3	+	937	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	38	1830	38	-3	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGCTTTTATTCT	1912	False	NA	NA	False	AATGAA	-20	NA	95136080	95141890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ES.22064.9	chr3	+	1890	2	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1934	False	NA	21	True	AATAAA	-11	NA	95136102	95143720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95136177_95141904
ES.22065.1	chr3	-	8578	8	NIC	ENSMUSG00000038766.17	novel	8661	10	NA	NA	-64	5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	6.73704349860091	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTGAATTCTTTACA	8712	False	NA	-17	True	AATAAA	-23	NA	95125291	95089071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95124899
ES.22065.10	chr3	-	4507	8	NIC	ENSMUSG00000038766.17	novel	8357	9	NA	NA	0	2028	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	6.73704349860091	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAACCATTTTGAAGT	8983	False	NA	NA	False	NA	NA	NA	95125020	95092871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95124899
ES.22065.11	chr3	-	3484	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	-49	4922	-4	901	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGTCATGTGGGAC	8934	False	NA	NA	False	TATAAA	-43	NA	95125069	95093998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
ES.22065.13	chr3	-	2580	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	-173	5950	34	9	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTAGTTGAATGCAGT	8810	False	NA	NA	False	NA	NA	NA	95125193	95095026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
ES.22065.14	chr3	-	4009	1	Genic_Genomic	ENSMUSG00000038766.17	novel	NA	NA	NA	NA	-6434	3114	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGAAAGAAAGAAAGAAGAA	1271	False	NA	NA	False	NA	NA	NA	95105643	95101634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_95101600_95105600
ES.22065.15	chr3	-	789	4	NIC	ENSMUSG00000038766.17	novel	1539	6	NA	NA	33	-727	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	8.5764535535124	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCAGGTGTGTTTCTT	8809	False	NA	NA	False	AAAACA	-18	NA	95125194	95111050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95111237_95111951_95112120_95113773_95113914_95124899
ES.22065.16	chr3	-	2991	2	Intergenic	novelGene_18214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	95120988	95117782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95120451_95120665
ES.22065.17	chr3	-	214	1	Intergenic	novelGene_18215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTAAAAGATAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	95120658	95120444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95120400_95120700
ES.22065.2	chr3	-	4914	2	NNC	ENSMUSG00000038766.17	novel	8357	9	NA	NA	4845	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	NA	False	NA	-22	True	AATAAA	-18	NA	95094364	95089076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95090855_95091228
ES.22065.3	chr3	-	8591	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	-234	0	-27	0	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8749	False	NA	-22	True	AATAAA	-18	NA	95125254	95089076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
ES.22065.4	chr3	-	8505	10	FSM	ENSMUSG00000038766.17	ENSMUST00000136139.8	8661	10	156	0	-6	0	multi-exon	FALSE	canonical	2	6	junction_7	7.40036702459854	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8932	False	NA	-22	True	AATAAA	-18	NA	95125071	95089076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95116150_95116248_95123524_95123580_95124899
ES.22065.5	chr3	-	9164	8	NIC	ENSMUSG00000038766.17	novel	3210	9	NA	NA	-54	0	intron_retention	FALSE	canonical	3	10	junction_6	6.54341856605645	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCAGTATTGTT	8884	False	NA	-29	True	AATAAA	-11	NA	95125119	95089083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95112120_95113773_95113914_95123524_95123580_95124899
ES.22065.6	chr3	-	8261	8	NNC	ENSMUSG00000038766.17	novel	8272	8	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	8.64728340024089	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCAGTATTGTT	8744	False	NA	-29	True	AATAAA	-11	NA	95125259	95089083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95125172
ES.22065.7	chr3	-	8144	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	58	155	43	-148	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTTTTTTAGGATAA	9041	False	NA	NA	False	AATAAA	-16	NA	95124962	95089231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
ES.22065.8	chr3	-	6387	7	NNC	ENSMUSG00000038766.17	novel	8272	8	NA	NA	4265	-1622	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	8.82074574826616	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTTTTCTCTTTAAGAT	NA	False	NA	-16	True	AATAAA	-17	NA	95111983	95090705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111322_95111434_95111951
ES.22065.9	chr3	-	6891	5	ISM	ENSMUSG00000038766.17	ENSMUST00000098873.11	8272	8	4365	1622	4365	-1622	3prime_fragment	FALSE	canonical	3	14	junction_4	4.81534007106456	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTTTTCTCTTTAAGAT	NA	False	NA	-16	True	AATAAA	-17	NA	95111883	95090705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041
ES.22066.1	chr3	-	101	1	Intergenic	novelGene_18216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCGTGTTTGTTATTAT	8048	False	NA	NA	False	ATTAAA	-30	NA	95125955	95125854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95125900_95126000
ES.22067.2	chr3	-	1699	4	NIC	ENSMUSG00000053192.10	novel	793	4	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.9942523039768	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGGGCTTAGTTTTT	4645	False	NA	-2	True	AATAAA	-14	NA	95137723	95126447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95127775_95135394_95135571_95136362_95136517_95137681
ES.22068.1	chr3	-	4899	1	Genic_Genomic	ENSMUSG00000053192.10	novel	NA	NA	NA	NA	-3349	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTTCAATTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	95142831	95137932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_95137900_95142800
ES.22068.2	chr3	-	2517	3	NNC	ENSMUSG00000053192.10	novel	793	4	NA	NA	-2493	-1604	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	393	False	NA	NA	False	NA	NA	NA	95141975	95137960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95139969_95140796_95140888_95141557
ES.22069.1	chr3	-	3943	1	NIC	ENSMUSG00000068860.6	novel	1959	2	NA	NA	549	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTCTCATTTTTCT	NA	False	NA	-1	True	AATATA	-21	NA	95148360	95144417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95144400_95148400
ES.22069.3	chr3	-	762	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	509	18	509	-18	multi-exon	FALSE	canonical	3	16	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGCTAAAAAATA	NA	False	NA	-19	True	TATAAA	-45	NA	95148400	95144435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95144541_95147260_95147423_95147905
ES.2207.1	chr1	-	1354	1	Antisense	novelGene_ENSMUSG00000037461.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGGTCTTCCTCTGGGT	6367	False	NA	NA	False	NA	NA	NA	191356750	191355396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_191355400_191356800
ES.22070.1	chr3	+	1184	1	Intergenic	novelGene_18217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGGTGGGGTGGGGGT	NA	False	NA	NA	False	TTTAAA	-29	NA	95176567	95177751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95176600_95177800
ES.22071.1	chr3	+	176	1	Intergenic	novelGene_18218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	95177916	95178092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95177900_95178100
ES.22072.1	chr3	+	176	1	Intergenic	novelGene_18219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCTTTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	95182008	95182184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95182000_95182200
ES.22073.1	chr3	+	3003	13	NNC	ENSMUSG00000038712.17	novel	2800	10	NA	NA	-5	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	78.3356382639615	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95188650	95203475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95188923_95189993_95190056_95190230_95190389_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ES.22073.10	chr3	+	2624	10	NNC	ENSMUSG00000038712.17	novel	2800	10	NA	NA	-99	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	56.7019497999065	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGTTCCTACCTTGGA	NA	False	NA	14	True	AATAAA	-15	NA	95190426	95203476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202613_95202737_95202961
ES.22073.11	chr3	+	2792	8	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-81	0	intron_retention	FALSE	canonical	2	5	junction_3	57.6031461725798	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95190444	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95190937_95194955_95195712_95198332_95198391_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583
ES.22073.12	chr3	+	3823	8	NNC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	62.2385142260098	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95190526	95203475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199478_95199595_95199935_95200039_95200935_95202737_95202961
ES.22073.13	chr3	+	2243	10	NNC	ENSMUSG00000038712.17	novel	2800	10	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	69.3933145105884	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95190763	95203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202147_95202298_95202613_95202737_95202961
ES.22073.14	chr3	+	6326	9	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	-141	0	intron_retention	FALSE	canonical	3	134	junction_7	25.8215026673507	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95190771	95203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.17	chr3	+	2295	10	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	523	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.7119282875444	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGTTCCTACCTTGGA	NA	False	NA	14	True	AATAAA	-15	NA	95194032	95203476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.18	chr3	+	3326	8	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	546	0	intron_retention	FALSE	canonical	3	144	junction_3	24.2806717454061	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95194055	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202737_95202961
ES.22073.19	chr3	+	2219	10	NNC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	559	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.736337621945	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTTGCGTTCCTACC	NA	False	NA	9	True	AATAAA	-10	NA	95194068	95203471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199937_95200039_95200935_95201079_95202105_95202298_95202616_95202737_95202961
ES.22073.2	chr3	+	3379	10	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-1	1	intron_retention	FALSE	canonical	1	2	junction_2	67.067314627604	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCGTTCCTACCTTGG	NA	False	NA	13	True	AATAAA	-14	NA	95188654	95203475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95188923_95189993_95190056_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105
ES.22073.20	chr3	+	2513	9	NIC	ENSMUSG00000038712.17	novel	1812	9	NA	NA	587	0	intron_retention	FALSE	canonical	0	0	junction_1	60.9871912781692	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95194096	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95194184_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202737_95202961
ES.22073.3	chr3	+	2866	12	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	65.9633005905055	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95188655	95203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95188923_95189993_95190056_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.4	chr3	+	2842	12	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	66.8586766592646	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95188692	95203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95188936_95189993_95190056_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.5	chr3	+	3773	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	-947	1	152	-1	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGTTCCTACCTTGGA	NA	False	NA	14	True	AATAAA	-15	NA	95189307	95203476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.6	chr3	+	2819	10	NNC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	54.3775098753787	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95190215	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202147_95202298_95202583_95202737_95202961
ES.22073.7	chr3	+	4741	7	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	130	junction_1	25.8677190507569	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95190228	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95199595_95199935_95200039_95200935_95202737_95202961
ES.22073.8	chr3	+	2589	11	NNC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.015997673404	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95190336	95203474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95190389_95190541_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22073.9	chr3	+	3292	9	NIC	ENSMUSG00000038712.17	novel	2827	10	NA	NA	110	0	intron_retention	FALSE	canonical	3	130	junction_1	27.6936364531637	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTGCGTTCCTACCT	NA	False	NA	10	True	AATAAA	-11	NA	95190364	95203472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ES.22074.1	chr3	+	172	1	Intergenic	novelGene_18221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGTAAAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	95211957	95212129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95212000_95212100
ES.22075.1	chr3	+	159	1	Antisense	novelGene_ENSMUSG00000093424.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAAACCTTTAA	454	False	NA	NA	False	NA	NA	NA	95218530	95218689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95218500_95218700
ES.22076.1	chr3	+	5157	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-195	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.941273397093	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTGTCAGACTATT	3830	False	NA	16	True	AATAAA	-2	NA	95221906	95230881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95225139_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.10	chr3	+	2446	8	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-25	-37	intron_retention	FALSE	canonical	3	406	junction_7	26.1120036514603	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4456	False	NA	8	True	ATTAAA	-15	NA	95222532	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.11	chr3	+	2613	7	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-21	-29	intron_retention	FALSE	canonical	3	406	junction_6	27.4327460447465	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTGTGTCAGACTATT	4460	False	NA	16	True	AATAAA	-2	NA	95222536	95230881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.12	chr3	+	2471	8	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-16	-37	intron_retention	FALSE	canonical	3	406	junction_7	26.5729646253404	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4465	False	NA	8	True	ATTAAA	-15	NA	95222541	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.13	chr3	+	1251	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	160	805	-3	122	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTAGCTGCCTCCCACA	4478	False	NA	NA	False	NA	NA	NA	95222554	95230105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.14	chr3	+	1928	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	-37	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	139.245969421021	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4501	False	NA	8	True	ATTAAA	-15	NA	95222577	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228953_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.15	chr3	+	2051	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	-37	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	138.424166965165	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4501	False	NA	8	True	ATTAAA	-15	NA	95222577	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95222657_95227372_95227547_95227897_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.16	chr3	+	2925	5	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	-9	intron_retention	FALSE	canonical	1	4	junction_2	195.074985582468	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAGAAAGGGTTAG	4501	False	NA	36	True	AATAAA	-22	NA	95222577	95230901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95228071_95228500_95229271_95229437_95229545_95229630
ES.22076.17	chr3	+	2153	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	-9	intron_retention	FALSE	canonical	3	406	junction_9	32.416654765303	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAGAAAGGGTTAG	4501	False	NA	36	True	AATAAA	-22	NA	95222577	95230901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.18	chr3	+	2674	8	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	4	-37	intron_retention	FALSE	canonical	3	406	junction_7	26.7123757911602	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4505	False	NA	8	True	ATTAAA	-15	NA	95222581	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95228071_95228252_95228372_95228500_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.19	chr3	+	2398	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	4	-37	intron_retention	FALSE	canonical	3	406	junction_9	33.0188872250451	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4505	False	NA	8	True	ATTAAA	-15	NA	95222581	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.2	chr3	+	2028	11	NIC	ENSMUSG00000015714.12	novel	775	8	NA	NA	1	-37	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	139.357095262495	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4026	False	NA	8	True	ATTAAA	-15	NA	95222102	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222214_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.20	chr3	+	1939	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	6	-37	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	140.435917462664	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4507	False	NA	8	True	ATTAAA	-15	NA	95222583	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.22	chr3	+	2054	11	NNC	ENSMUSG00000015714.12	novel	1524	6	NA	NA	170	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	136.729989395158	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGTTAGTTTTTTT	4671	False	NA	43	True	AATAAA	-29	NA	95222747	95230908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95222850_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.3	chr3	+	2307	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	-92	1	-92	-1	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGGTTAGTTTTTTTC	4226	False	NA	44	True	AATAAA	-30	NA	95222302	95230909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.4	chr3	+	2483	9	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-28	-37	intron_retention	FALSE	canonical	3	406	junction_8	25.2929708614864	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATGACTGTGTC	4290	False	NA	8	True	ATTAAA	-15	NA	95222366	95230873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.5	chr3	+	2289	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-57	-9	intron_retention	FALSE	canonical	3	406	junction_9	33.6675834125276	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAGAAAGGGTTAG	4424	False	NA	36	True	AATAAA	-22	NA	95222500	95230901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.7	chr3	+	2176	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	406	junction_9	24.2278280974789	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGGTTAGTTTTTTTC	4445	False	NA	44	True	AATAAA	-30	NA	95222521	95230909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22076.9	chr3	+	2074	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.712345125628	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGGTTAGTTTTTTTC	4449	False	NA	44	True	AATAAA	-30	NA	95222525	95230909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228262_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ES.22077.1	chr3	+	176	1	Intergenic	novelGene_18225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95259143	95259319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95259100_95259300
ES.22078.1	chr3	-	8027	15	Fusion	ENSMUSG00000068860.6_ENSMUSG00000015711.9_ENSMUSG00000028115.17	novel	1251	11	NA	NA	395	-6	intron_retention	TRUE	canonical	1	3	junction_4	86.4437117789516	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTCTGTGCCTAGGG	4745	False	NA	NA	False	AATAAA	-13	NA	95188992	95148587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95149173_95150042_95150142_95150308_95150396_95151452_95151585_95152295_95152399_95152960_95153144_95155886_95156112_95157116_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ES.22078.2	chr3	-	1492	10	FSM	ENSMUSG00000028115.17	ENSMUST00000107195.9	1810	10	-6	324	-6	230	multi-exon	FALSE	canonical	1	1	junction_9	2.53859103528797	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAAGGCTCTGAGTTT	NA	False	NA	NA	False	AAAAAG	-19	NA	95158510	95148905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95149173_95150042_95150142_95150308_95150396_95151452_95151585_95152295_95152399_95152960_95153144_95155886_95156112_95157116_95157182_95157477_95157574_95158275
ES.22078.3	chr3	-	4588	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	-1449	1	-1449	-1	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTGTTTCTTTTTAAA	2901	False	NA	NA	False	ATTAAA	-18	NA	95190836	95160985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ES.22078.4	chr3	-	2905	8	NNC	ENSMUSG00000015711.9	novel	3140	8	NA	NA	254	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.4013769220402	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTGTTTCTTTTTAAA	4604	False	NA	NA	False	ATTAAA	-18	NA	95189133	95160985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171108_95172728_95172932_95175541_95175635_95188895
ES.22078.5	chr3	-	2669	7	NIC	ENSMUSG00000015711.9	novel	3140	8	NA	NA	311	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	70.6470098447202	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTGTTTCTTTTTAAA	4661	False	NA	NA	False	ATTAAA	-18	NA	95189076	95160985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95162739_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ES.22078.6	chr3	-	2728	8	NNC	ENSMUSG00000015711.9	novel	3140	8	NA	NA	321	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	65.4260760597136	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTGTTTCTTTTTAAA	4671	False	NA	NA	False	ATTAAA	-18	NA	95189066	95160985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172842_95175541_95175635_95188895
ES.22078.7	chr3	-	2042	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	335	763	335	-763	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATATCTTTGGCTCCT	4685	False	NA	NA	False	NA	NA	NA	95189052	95161747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ES.22078.8	chr3	-	2307	5	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	305	7057	305	4427	5prime_fragment	FALSE	canonical	3	150	junction_2	19.4855715851499	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAGAAAAAAAAAAA	4655	False	NA	NA	False	NA	NA	NA	95189082	95168041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ES.22078.9	chr3	-	671	3	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	360	11501	360	-17	5prime_fragment	FALSE	canonical	3	153	junction_1	9	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAATAGTATCA	4710	False	NA	NA	False	NA	NA	NA	95189027	95172485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95172932_95175541_95175635_95188895
ES.22079.1	chr3	-	200	1	Intergenic	novelGene_18220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGAGGATTTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	95196823	95196623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95196600_95196800
ES.2208.1	chr1	+	7024	8	NNC	ENSMUSG00000026623.17	novel	586	3	NA	NA	-5149	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6833998962609	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGCCTTGTTCTTAAC	NA	False	NA	10	True	AATAAA	-19	NA	191444796	191516368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191444959_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.10	chr1	+	5798	9	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	17	-1293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.4581187773233	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	191450155	191515074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450318_191451465_191451731_191455178_191455247_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.11	chr1	+	6974	9	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.8458659671416	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191450170	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513239_191513272
ES.2208.12	chr1	+	7028	8	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.358256590205	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191450171	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495635_191495784_191508434_191508542_191510494
ES.2208.13	chr1	+	5679	9	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	35	-1293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.8458659671416	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	191450173	191515074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513235_191513267
ES.2208.14	chr1	+	6285	9	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	45	-677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.8458659671416	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTCACTGGTCCAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	191450183	191515690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513235_191513267
ES.2208.15	chr1	+	2703	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	243	4287	50	-9	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACCAAAAAGAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	191450188	191512080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.16	chr1	+	4603	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	251	2379	58	1899	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGAAGGGTTAACTGAT	NA	False	NA	NA	False	AAGAAA	-20	NA	191450196	191513988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.17	chr1	+	5908	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	-126	-2990	-126	-1288	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTTTTAATTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	191450374	191515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.19	chr1	+	7173	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	-103	-4278	-103	0	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191450397	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.2	chr1	+	7327	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	-94	0	-94	0	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191449851	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.20	chr1	+	5380	5	NIC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	-95	-1296	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38.7903016229573	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAAACAATGCTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	191450405	191515071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191450710_191451465_191451731_191495656_191495784_191508434_191508542_191510494
ES.2208.21	chr1	+	1606	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	-93	1279	-93	-1279	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATGATGTGCTAATA	NA	False	NA	74	True	TTTAAA	-24	NA	191450407	191510810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.22	chr1	+	5976	9	NNC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	-76	-1293	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	39.2651244745257	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	191450424	191515074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510136_191510260_191510494
ES.2208.24	chr1	+	6451	4	NIC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	-2	-5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	39.293765408777	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTGGGTGGCCTTGTT	NA	False	NA	4	True	AATAAA	-13	NA	191450498	191516362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191450710_191451465_191451731_191508434_191508542_191510494
ES.2208.25	chr1	+	2797	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110856.8	2792	8	13	-18	13	18	multi-exon	FALSE	canonical	3	42	junction_1	20.3610271983372	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAATTTTCCCCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	191450513	191512107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.26	chr1	+	5716	9	NNC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	33	-1288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.6823395861986	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTTTTAATTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	191450533	191515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494_191513235_191513267
ES.2208.27	chr1	+	5995	7	ISM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	1372	1014	685	-1014	3prime_fragment	FALSE	canonical	3	70	junction_2	11.8602979164381	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTACAATATAATTATCA	NA	False	NA	NA	False	AATAAA	-15	NA	191451317	191515353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.28	chr1	+	5675	7	ISM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	1418	1288	731	-1288	3prime_fragment	FALSE	canonical	3	70	junction_2	11.8602979164381	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTTTTAATTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	191451363	191515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.29	chr1	+	164	1	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTTTTGGGCCAC	NA	False	NA	NA	False	NA	NA	NA	191466327	191466491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191466300_191466500
ES.2208.3	chr1	+	5881	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	67	1285	67	-1285	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTAATTCTTACTAAT	NA	False	NA	NA	False	AATAAA	-27	NA	191450012	191515082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.30	chr1	+	2284	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	191470153	191472437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191470200_191472400
ES.2208.31	chr1	+	6478	5	ISM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	38097	0	37410	0	3prime_fragment	FALSE	canonical	3	85	junction_1	8.73212459828649	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191488042	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.33	chr1	+	3700	1	NIC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	57748	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACCAAAAAGAGAAA	501	False	NA	NA	False	AATAAA	-21	NA	191508380	191512080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191508400_191512100
ES.2208.4	chr1	+	6427	9	NIC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	67	-908	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5998466254061	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTAGTCTAGTGTATG	NA	False	NA	NA	False	GATAAA	-20	NA	191450012	191515459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191450318_191450540_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.5	chr1	+	1465	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	128	5640	-65	-1362	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAATTCAA	NA	False	NA	-9	True	AATATA	-2	NA	191450073	191510727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.6	chr1	+	5980	9	NIC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	-59	-1288	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5998466254061	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCTTTTAATTCTTACT	NA	False	NA	NA	False	AATAAA	-24	NA	191450079	191515079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191450318_191450540_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.7	chr1	+	7218	9	NIC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5998466254061	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191450129	191516367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191450318_191450540_191450710_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.2208.8	chr1	+	8976	7	ISM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	208	2	15	-2	intron_retention	FALSE	canonical	3	33	junction_1	24.2263630507484	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGTGGCCTTGTTCTT	NA	False	NA	7	True	AATAAA	-16	NA	191450153	191516365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434
ES.2208.9	chr1	+	6015	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	209	1009	16	-1009	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATATAATTATCATTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	191450154	191515358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ES.22080.1	chr3	-	1922	13	Fusion	ENSMUSG00000015702.14_ENSMUSG00000093424.4	novel	1872	13	NA	NA	92	0	intron_retention	FALSE	canonical	0	0	junction_2	1.29099444873581	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCTAAAACAAAGACGG	9886	False	NA	NA	False	AATAAA	-17	NA	95222287	95203406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642_95213734_95222113
ES.22080.2	chr3	-	561	2	FSM	ENSMUSG00000093424.4	ENSMUST00000176569.3	555	2	-7	1	-7	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGTACATTGTT	9728	False	NA	NA	False	NA	NA	NA	95222445	95218689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95218919_95222113
ES.22081.1	chr3	-	155	1	Intergenic	novelGene_18222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAATAAATAAATCTAA	7983	False	NA	NA	False	NA	NA	NA	95224190	95224035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95224000_95224200
ES.22082.1	chr3	-	6031	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	20	-1429	18	1429	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCTCTTGACTCCCA	1662	False	NA	NA	False	AATAAA	-19	NA	95264493	95229406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.11	chr3	-	5852	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-17	0	intron_retention	FALSE	canonical	3	141	junction_10	31.9877919926508	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1671	False	NA	-4	True	ATTAAA	-15	NA	95264484	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.12	chr3	-	5749	21	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-47	0	intron_retention	FALSE	canonical	3	141	junction_10	31.3773803877889	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1595	False	NA	-4	True	ATTAAA	-15	NA	95264560	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.13	chr3	-	4502	5	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	18931	0	intron_retention	FALSE	canonical	3	234	junction_3	10.2347447452294	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	5685	False	NA	-4	True	ATTAAA	-15	NA	95245469	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95235148_95235858_95236029_95244459
ES.22082.14	chr3	-	5294	6	ISM	ENSMUSG00000015697.15	ENSMUST00000124638.8	5652	21	26739	0	26673	0	intron_retention	FALSE	canonical	3	215	junction_2	15.9072310601185	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	3443	False	NA	-4	True	ATTAAA	-15	NA	95237727	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696
ES.22082.16	chr3	-	5784	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	0	intron_retention	FALSE	canonical	3	141	junction_9	31.0828577244971	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1673	False	NA	-4	True	ATTAAA	-15	NA	95264482	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.19	chr3	-	5888	20	NIC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19	junction_19	53.4663795259431	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1673	False	NA	-4	True	ATTAAA	-15	NA	95264482	95230835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ES.22082.2	chr3	-	2778	2	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	31339	1428	intron_retention	FALSE	canonical	3	250	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGGCTCTTGACTCCC	8109	False	NA	NA	False	AATAAA	-18	NA	95233061	95229407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95232153_95233028
ES.22082.21	chr3	-	4080	23	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.2094139747582	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTCTGAAATGGT	1693	False	NA	-5	True	ATTAAA	-14	NA	95264462	95230836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95230862_95231351_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.23	chr3	-	5915	20	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	17	-1	intron_retention	FALSE	canonical	3	29	junction_9	49.7592542096582	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTCTGAAATGGT	1661	False	NA	-5	True	ATTAAA	-14	NA	95264494	95230836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.25	chr3	-	4631	22	FSM	ENSMUSG00000015697.15	ENSMUST00000015841.12	4658	22	26	1	-18	-1	multi-exon	FALSE	canonical	3	19	junction_21	51.1160255943511	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTCTGAAATGGT	1670	False	NA	-5	True	ATTAAA	-14	NA	95264485	95230836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ES.22082.26	chr3	-	4563	22	NNC	ENSMUSG00000015697.15	novel	4573	22	NA	NA	74	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.4717238376885	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1829	False	NA	-6	True	ATTAAA	-13	NA	95264326	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264242
ES.22082.27	chr3	-	4539	22	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.3501288677084	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1661	False	NA	-6	True	ATTAAA	-13	NA	95264494	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95232002_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.28	chr3	-	4961	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	141	junction_9	28.9189334025526	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1673	False	NA	-6	True	ATTAAA	-13	NA	95264482	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.29	chr3	-	4778	22	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	54.2310919848428	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1673	False	NA	-6	True	ATTAAA	-13	NA	95264482	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249209_95252698_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.3	chr3	-	5942	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-7	110	intron_retention	FALSE	canonical	3	141	junction_9	32.1743002343154	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCACACCAGCTGTCATA	1748	False	NA	NA	False	AATAAA	-23	NA	95264407	95230725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.30	chr3	-	4948	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	20	-2	intron_retention	FALSE	canonical	3	141	junction_9	32.1844579755517	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1664	False	NA	-6	True	ATTAAA	-13	NA	95264491	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.31	chr3	-	5754	21	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-26	-2	intron_retention	FALSE	canonical	0	0	junction_17	55.5691236209462	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1616	False	NA	-6	True	ATTAAA	-13	NA	95264539	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255435_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.32	chr3	-	6179	17	NIC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	2497	-2	intron_retention	FALSE	canonical	3	141	junction_8	32.8761287829026	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	4252	False	NA	-6	True	ATTAAA	-13	NA	95261903	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233726_95234518_95235148_95235858_95236029_95244459_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852
ES.22082.33	chr3	-	5694	21	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_13	55.3520324830082	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1671	False	NA	-6	True	ATTAAA	-13	NA	95264484	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249181_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.34	chr3	-	4978	22	NNC	ENSMUSG00000015697.15	novel	4573	22	NA	NA	179	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_21	64.0421134117967	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1934	False	NA	-6	True	ATTAAA	-13	NA	95264221	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95263722
ES.22082.35	chr3	-	4442	22	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	54.4481696166471	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1715	False	NA	-6	True	ATTAAA	-13	NA	95264440	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95249071_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.36	chr3	-	4296	21	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	1040	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.7172325228021	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	2795	False	NA	-6	True	ATTAAA	-13	NA	95263360	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248999_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ES.22082.37	chr3	-	5784	20	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	17	-2	intron_retention	FALSE	canonical	1	2	junction_18	56.6251219171576	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGGTCTGAAATGG	1706	False	NA	-6	True	ATTAAA	-13	NA	95264449	95230837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254433_95255306_95255407_95257149_95257185_95261852_95261974_95263244_95263514_95264375
ES.22082.38	chr3	-	3755	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.3011398298624	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTGGTCTGAAATG	1660	False	NA	-7	True	ATTAAA	-12	NA	95264495	95230838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.39	chr3	-	5391	20	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_2	68.9349124947934	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTGGTCTGAAATG	1671	False	NA	-7	True	ATTAAA	-12	NA	95264484	95230838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95232089_95232153_95233028_95233195_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.4	chr3	-	4700	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	31	-109	-15	109	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCACACCAGCTGTCAT	1673	False	NA	NA	False	AATAAA	-22	NA	95264482	95230726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.41	chr3	-	4442	22	NNC	ENSMUSG00000015697.15	novel	4573	22	NA	NA	9	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.3267946344018	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1653	False	NA	-21	True	AATATA	-9	NA	95264502	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95232089_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.42	chr3	-	6797	5	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	24791	-17	intron_retention	FALSE	canonical	3	234	junction_4	11.3219918742243	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1561	False	NA	-21	True	AATATA	-9	NA	95239609	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233195_95233453_95235148_95235858
ES.22082.44	chr3	-	3531	8	ISM	ENSMUSG00000015697.15	ENSMUST00000124638.8	5652	21	26981	17	26915	-17	3prime_fragment	FALSE	canonical	3	215	junction_2	13.7573727914326	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	3685	False	NA	-21	True	AATATA	-9	NA	95237485	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858
ES.22082.47	chr3	-	4478	21	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	16	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.1653948568641	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1660	False	NA	-21	True	AATATA	-9	NA	95264495	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247419_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.49	chr3	-	6328	18	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-17	intron_retention	FALSE	canonical	3	141	junction_8	31.2136293538487	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1673	False	NA	-21	True	AATATA	-9	NA	95264482	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.50	chr3	-	4568	22	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	-15	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	54.3910006561835	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1673	False	NA	-21	True	AATATA	-9	NA	95264482	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264381
ES.22082.51	chr3	-	4142	5	NIC	ENSMUSG00000015697.15	novel	5652	21	NA	NA	26912	-17	intron_retention	FALSE	canonical	3	234	junction_4	5.8949130612758	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	3682	False	NA	-21	True	AATATA	-9	NA	95237488	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233726_95234518_95235148_95235858
ES.22082.52	chr3	-	3887	21	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.6052830223892	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1673	False	NA	-21	True	AATATA	-9	NA	95264482	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.53	chr3	-	5694	21	NIC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	-17	-17	intron_retention	FALSE	canonical	3	19	junction_20	52.1373186882486	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1671	False	NA	-21	True	AATATA	-9	NA	95264484	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ES.22082.55	chr3	-	7130	19	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-17	intron_retention	FALSE	canonical	3	141	junction_9	32.7287769326349	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1673	False	NA	-21	True	AATATA	-9	NA	95264482	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95263514_95264375
ES.22082.56	chr3	-	4451	22	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	17	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.4876167011811	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1772	False	NA	-21	True	AATATA	-9	NA	95264383	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95232002_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ES.22082.58	chr3	-	3275	13	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	15295	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.5936428176315	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	2049	False	NA	-21	True	AATATA	-9	NA	95249105	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245729_95246344_95247217_95247419_95248644_95248775_95248966
ES.22082.59	chr3	-	2309	10	NNC	ENSMUSG00000015697.15	novel	4573	22	NA	NA	19349	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.6327218779094	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	6103	False	NA	-21	True	AATATA	-9	NA	95245051	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95244933
ES.22082.6	chr3	-	4581	22	NNC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	52.8759726220296	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTCTGAAATGGTCCC	1673	False	NA	-2	True	ATTAAA	-17	NA	95264482	95230833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247484_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.60	chr3	-	5524	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-17	intron_retention	FALSE	canonical	0	0	junction_4	53.9161655590163	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	1673	False	NA	-21	True	AATATA	-9	NA	95264482	95230852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.61	chr3	-	4514	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	-48	156	-48	-156	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATTTGCCCTGTGTA	1594	False	NA	61	True	NA	NA	NA	95264561	95230991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.62	chr3	-	4727	20	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-18	-217	intron_retention	FALSE	canonical	3	141	junction_9	32.1844579755517	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTGCCTTGATCTTCC	1670	False	NA	0	True	NA	NA	NA	95264485	95231052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.64	chr3	-	4594	21	NIC	ENSMUSG00000015697.15	novel	4622	22	NA	NA	-15	-233	intron_retention	FALSE	canonical	3	141	junction_10	32.0864457364788	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGGTTTGTCTTATCT	1673	False	NA	-16	True	NA	NA	NA	95264482	95231068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95231502_95231615_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.65	chr3	-	3906	21	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	1083	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.6281178901462	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGGTTTGTCTTATCT	2838	False	NA	-16	True	NA	NA	NA	95263317	95231068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95232089_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ES.22082.67	chr3	-	4395	22	FSM	ENSMUSG00000015697.15	ENSMUST00000015841.12	4658	22	29	234	-15	-234	multi-exon	FALSE	canonical	3	19	junction_21	51.1160255943511	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGGTTTGTCTTATC	1673	False	NA	-17	True	NA	NA	NA	95264482	95231069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ES.22082.69	chr3	-	4287	22	NNC	ENSMUSG00000015697.15	novel	4658	22	NA	NA	130	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	54.3910006561835	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGAGATTGTGGTTTG	1885	False	NA	-24	True	NA	NA	NA	95264270	95231076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264226
ES.22082.7	chr3	-	4672	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	-48	-2	-48	2	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTCTGAAATGGTCCC	1594	False	NA	-2	True	ATTAAA	-17	NA	95264561	95230833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ES.22082.70	chr3	-	156	1	Intergenic	novelGene_18223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATTAATTAA	1637	False	NA	NA	False	NA	NA	NA	95239533	95239377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95239400_95239500
ES.22082.71	chr3	-	204	1	Intergenic	novelGene_18224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTAAGCATACATTCAGT	NA	False	NA	NA	False	AATGAA	-5	NA	95255938	95255734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95255700_95255900
ES.22083.1	chr3	+	156	1	Intergenic	novelGene_18226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAATAAACAAATCAA	NA	False	NA	NA	False	NA	NA	NA	95279802	95279958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95279800_95280000
ES.22084.1	chr3	+	1069	2	Intergenic	novelGene_18227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTTTGATCAGAGTAT	1462	False	NA	NA	False	NA	NA	NA	95289109	95290247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95290077_95290145
ES.22085.1	chr3	+	3099	1	Intergenic	novelGene_18228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTCTCATTGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	95314224	95317323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95314200_95317300
ES.22086.1	chr3	+	914	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-362	-2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	52.0917993119412	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACATCCAGTGTCTTCCT	NA	False	NA	6	True	AGTAAA	-20	NA	95334619	95338396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95335864_95336134_95337597_95337750_95337994
ES.22086.10	chr3	+	4462	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-340	-223	multi-exon	FALSE	canonical	0	0	junction_13	94.5688055291281	484	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTGTTTTTAACTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	95334641	95404325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.11	chr3	+	4788	25	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-333	0	multi-exon	FALSE	canonical	0	0	junction_14	93.5723780319575	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334648	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95334899_95335007_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.12	chr3	+	1129	3	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-333	-3	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	55	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334648	95338395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95335864_95336134_95337597
ES.22086.13	chr3	+	4669	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-312	-3	multi-exon	FALSE	non_canonical	0	0	junction_13	105.73001247873	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATTGTGTTGTGTTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	95334669	95404545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397176_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.14	chr3	+	5356	25	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-293	-2	multi-exon	FALSE	canonical	0	0	junction_7	120.981396354518	473	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTAGGATCCTCTGAAA	NA	False	NA	0	True	ATTAAA	-13	NA	95334688	95402880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95400843_95400907_95401008_95401172_95401757_95401925_95402614
ES.22086.15	chr3	+	2796	2	FSM	ENSMUSG00000097532.3	ENSMUST00000181809.2	2559	2	-240	3	-240	-3	multi-exon	FALSE	canonical	3	169	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334741	95338395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95335007_95335864
ES.22086.16	chr3	+	998	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-240	-92	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	55.6437078403499	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTGTTTGTT	NA	False	NA	-84	True	AGTAAA	-14	NA	95334741	95338306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95335007_95335864_95336134_95337597_95337750_95337994
ES.22086.17	chr3	+	4998	25	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-239	0	multi-exon	FALSE	canonical	0	0	junction_14	114.453289841557	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334742	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95335045_95335864_95336134_95337597_95337750_95355682_95355795_95358968_95359046_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.18	chr3	+	950	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-147	-85	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	60.0240692463356	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTGTTTTGCATT	NA	False	NA	-77	True	AGTAAA	-21	NA	95334834	95338313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95335045_95335864_95336134_95337597_95337750_95337994
ES.22086.19	chr3	+	1176	3	NIC	ENSMUSG00000097532.3	novel	2559	2	NA	NA	-84	-3	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	6.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334897	95338395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95335007_95335864_95336134_95337597
ES.22086.2	chr3	+	4704	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-359	0	multi-exon	TRUE	canonical	0	0	junction_13	103.386879636187	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334622	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.20	chr3	+	3496	1	Genic_Genomic	ENSMUSG00000097532.3	novel	NA	NA	NA	NA	-82	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334899	95338395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95334900_95338400
ES.22086.21	chr3	+	4681	23	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	378	5	NA	NA	-82	0	multi-exon	FALSE	non_canonical	0	0	junction_9	108.467232360136	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334899	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95335007_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383493_95387504_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.22	chr3	+	4735	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-60	0	multi-exon	FALSE	canonical	0	0	junction_13	108.03297123261	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95334921	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95335045_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397195_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.23	chr3	+	3009	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-19	18	multi-exon	FALSE	canonical	0	0	junction_13	96.5511706010002	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGATAGGTGAGGCC	NA	False	NA	20	True	ATTAAA	-33	NA	95334962	95402900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95335007_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.24	chr3	+	4657	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	2	0	multi-exon	FALSE	non_canonical	0	0	junction_13	99.3397485061761	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334983	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95335007_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397176_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.25	chr3	+	4350	22	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	1721	0	multi-exon	FALSE	canonical	0	0	junction_11	98.0409466033675	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95337594	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.26	chr3	+	2758	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	-15	-44	-15	40	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGTCCTTATTTCTT	NA	False	NA	42	True	NA	NA	NA	95341683	95402922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.27	chr3	+	4387	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	-15	-1673	-15	0	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341683	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.28	chr3	+	5557	21	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-10	0	intron_retention	FALSE	canonical	1	5	junction_18	67.6342368922723	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341688	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95400843_95401172_95401757_95401925_95402614
ES.22086.29	chr3	+	4617	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.183176091517	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341692	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95376229_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.3	chr3	+	2728	3	NNC	ENSMUSG00000097532.3	novel	2559	2	NA	NA	-358	0	intron_retention	FALSE	canonical	3	47	junction_1	61	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCAGTGTCTTCCTCT	NA	False	NA	8	True	AGTAAA	-22	NA	95334623	95338398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95334899_95335007_95335864
ES.22086.30	chr3	+	4125	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	2	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.2014032107464	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCGACTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95341702	95404320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387517_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.31	chr3	+	4146	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	4	-1451	2	-219	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTTAACTGTGATCT	NA	False	NA	NA	False	AATAAA	-23	NA	95341702	95404329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.32	chr3	+	7821	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	103.487114011552	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341703	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95379005_95379636_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401866_95402614
ES.22086.33	chr3	+	4633	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	112.997147627278	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341703	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95376229_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395638_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.35	chr3	+	4322	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341703	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.36	chr3	+	4444	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.728677788034	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341703	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95358968_95359046_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.38	chr3	+	4251	21	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	101.155375536844	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341704	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.4	chr3	+	2611	2	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-345	3	intron_retention	FALSE	canonical	3	46	junction_1	0	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCTTCCTCTATT	NA	False	NA	11	True	AGTAAA	-25	NA	95334636	95338401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95335864
ES.22086.40	chr3	+	4086	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	8	231	-6	-228	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCGACTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95341708	95404320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.41	chr3	+	4233	23	NNC	ENSMUSG00000015522.19	novel	4260	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	109.570395123881	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341714	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383496_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614_95402688_95402806
ES.22086.42	chr3	+	4335	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	88.5623907319252	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATTGTGTTGTGTTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	95341714	95404545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377689_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391158_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.43	chr3	+	4308	21	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	89.6886141045785	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341714	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95355682_95355795_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.44	chr3	+	4667	24	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	119.076503184239	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341719	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95358968_95359046_95359895_95359941_95367687_95367733_95374103_95374149_95376229_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.47	chr3	+	2562	20	NIC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	5	40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	112.897865249257	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGTCCTTATTTCTT	NA	False	NA	42	True	NA	NA	NA	95341719	95402922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.48	chr3	+	2635	21	NNC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.977702880486	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGGATCCTCTGAAAT	NA	False	NA	1	True	ATTAAA	-14	NA	95341719	95402881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355789_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401933_95402614
ES.22086.49	chr3	+	4367	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	88.9445545654599	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341720	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402594
ES.22086.5	chr3	+	1020	5	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-345	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	18.0069431053691	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACATCCAGTGTCTTCC	NA	False	NA	5	True	AGTAAA	-19	NA	95334636	95338395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95335864_95336134_95336793_95336918_95337597_95337750_95337994
ES.22086.50	chr3	+	4359	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	99.8220184836475	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341720	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397176_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.52	chr3	+	6127	20	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	-87	intron_retention	FALSE	canonical	3	208	junction_4	30.4549074049085	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCTTCCCTCACCCCT	NA	False	NA	-89	True	AATAAA	-11	NA	95341720	95402791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95401172_95401757_95401925_95402614
ES.22086.55	chr3	+	4372	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	88.4997405738155	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTGTGTTGTGTTGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	95341720	95404546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395638_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.59	chr3	+	4451	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.592222099837	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341720	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95358968_95359046_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395638_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.6	chr3	+	4871	25	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-344	0	multi-exon	FALSE	canonical	0	0	junction_14	97.7205482769901	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334637	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95334827_95335007_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.60	chr3	+	8576	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	-75	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	112.498667162677	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCTGATATGTACCCT	NA	False	NA	-77	True	AATAAA	-23	NA	95341720	95402803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95376295_95377310_95378942_95379435_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.61	chr3	+	4918	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	6	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.9716253272845	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCTCACCCCTGATAT	NA	False	NA	-84	True	AATAAA	-16	NA	95341720	95402796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.62	chr3	+	4073	21	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	7	-228	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	89.6886141045785	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCGACTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95341721	95404320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95355682_95355795_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.64	chr3	+	2630	20	NIC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	7	40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	102.941906000814	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGTCCTTATTTCTT	NA	False	NA	42	True	NA	NA	NA	95341721	95402922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95355682_95355795_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.67	chr3	+	4430	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.25485398017	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTTGTGTTGTGTGAT	NA	False	NA	NA	False	TTTAAA	-24	NA	95341721	95404550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95351638_95351721_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.69	chr3	+	4336	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.4937059524599	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95341727	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391164_95392177_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.70	chr3	+	2916	23	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.183176091517	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGGATCCTCTGAAATT	NA	False	NA	2	True	ATTAAA	-15	NA	95341727	95402882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95376229_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.71	chr3	+	4337	22	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	88.1601048186347	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341727	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398339_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.72	chr3	+	4094	18	NIC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	96.4852212718374	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341729	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95341873_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.73	chr3	+	4401	24	NNC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.696846625619	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341828	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95341873_95351638_95351721_95355682_95355795_95358968_95359046_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ES.22086.74	chr3	+	3992	18	FSM	ENSMUSG00000015522.19	ENSMUST00000156653.8	2825	18	503	-1670	503	0	multi-exon	FALSE	canonical	0	0	junction_7	90.8133947408633	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95374101	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ES.22086.75	chr3	+	6347	19	NNC	ENSMUSG00000015522.19	novel	2825	18	NA	NA	537	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.246827628093	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95374135	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95376295_95377310_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95400843_95400907_95401011_95401172_95401757_95401925_95402614
ES.22086.76	chr3	+	5979	3	NNC	ENSMUSG00000015522.19	novel	778	3	NA	NA	1809	-5404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95375407	95382139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95376419_95376539_95379005_95379636
ES.22086.77	chr3	+	4919	3	NNC	ENSMUSG00000015522.19	novel	778	3	NA	NA	2142	-5374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTAAGCCTGTACATT	NA	False	NA	NA	False	NA	NA	NA	95375740	95382169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95376295_95377310_95378942_95379435
ES.22086.78	chr3	+	3795	18	NNC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	3903	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.4852212718374	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95377501	95404551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614_95402687_95402828
ES.22086.79	chr3	+	5601	3	NNC	ENSMUSG00000015522.19	novel	778	3	NA	NA	-3442	-1999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCTGGCAGAGGTACA	NA	False	NA	NA	False	NA	NA	NA	95377984	95385544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95378801_95379432_95382064_95383390
ES.22086.8	chr3	+	4568	25	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-342	0	multi-exon	FALSE	non_canonical	0	0	junction_10	118.390354512801	485	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95334639	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383496_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614_95402689_95402806
ES.22086.80	chr3	+	3481	1	NIC	ENSMUSG00000015522.19	novel	2557	19	NA	NA	637	-1999	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTCTGGCAGAGGTACA	NA	False	NA	NA	False	NA	NA	NA	95382063	95385544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95382100_95385500
ES.22086.81	chr3	+	2673	7	NNC	ENSMUSG00000015522.19	novel	4325	21	NA	NA	526	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	104.797291101546	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95397241	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401933_95402614
ES.22086.82	chr3	+	4546	3	ISM	ENSMUSG00000015522.19	ENSMUST00000156653.8	2825	18	25128	-1670	2011	0	3prime_fragment	FALSE	canonical	3	266	junction_2	16	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTTGTGTTGTGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	95398726	95404548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95401172_95401757_95401925_95402614
ES.22086.83	chr3	+	3926	3	ISM	ENSMUSG00000015522.19	ENSMUST00000156653.8	2825	18	25520	-1442	2403	-228	3prime_fragment	FALSE	canonical	3	266	junction_2	16	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCGACTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95399118	95404320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95401172_95401757_95401925_95402614
ES.22086.9	chr3	+	2787	3	NNC	ENSMUSG00000097532.3	novel	2559	2	NA	NA	-340	5	intron_retention	FALSE	canonical	1	2	junction_1	83.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTCTTCCTCTATTAT	NA	False	NA	13	True	AGTAAA	-27	NA	95334641	95338403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95334711_95334827_95335007_95335864
ES.22087.1	chr3	-	3914	1	Intergenic	novelGene_18229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAATAAAATTTACCTG	2163	False	NA	NA	False	NA	NA	NA	95355067	95351153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95351200_95355100
ES.22087.2	chr3	-	176	1	Intergenic	novelGene_18230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	4618	False	NA	NA	False	NA	NA	NA	95352612	95352436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95352400_95352600
ES.22088.1	chr3	-	178	1	Intergenic	novelGene_18231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTATTCCTA	2373	False	NA	NA	False	NA	NA	NA	95400450	95400272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95400300_95400400
ES.22089.1	chr3	+	175	1	Intergenic	novelGene_18232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	95423074	95423249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95423100_95423200
ES.2209.1	chr1	+	176	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAACATTTAAG	NA	False	NA	NA	False	NA	NA	NA	191543066	191543242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191543100_191543200
ES.22090.1	chr3	+	172	1	Intergenic	novelGene_18233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	95464441	95464613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95464400_95464600
ES.22091.1	chr3	+	1459	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-71	-3	-70	-1	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466917	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.10	chr3	+	1463	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	-21	2	-20	-2	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466967	95494905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
ES.22091.12	chr3	+	1409	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7207385357915	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTTACCTGAGATAA	NA	False	NA	NA	False	AATAAA	-16	NA	95466976	95494908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468531_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.13	chr3	+	1483	15	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-11	-402	at_least_one_novel_splicesite	TRUE	canonical	3	21	junction_2	108.133822041893	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95466976	95492707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450
ES.22091.14	chr3	+	1226	13	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-11	360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.621076492147	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTACTATTTC	NA	False	NA	34	True	ATTAAA	-26	NA	95466976	95493469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95468538_95468592_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95493210
ES.22091.15	chr3	+	1658	14	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-9	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.4968574550144	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466978	95495169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95478220_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.16	chr3	+	1661	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	-8	-268	-7	189	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	NA	False	NA	8	True	ATTAAA	-19	NA	95466980	95495171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.17	chr3	+	1710	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-7	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	124.421255776049	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCCAATTTTTATTTT	NA	False	NA	26	True	ATTAAA	-18	NA	95466980	95493461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95493048
ES.22091.18	chr3	+	1138	13	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	116.46348378593	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466988	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475051_95478238_95478266_95482845_95482914_95483587_95483740_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.19	chr3	+	1494	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	0	-109	0	30	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCTTTTTTTTTAA	NA	False	NA	NA	False	AATACA	-17	NA	95466988	95495012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.2	chr3	+	1506	12	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-58	188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	126.768937979158	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	7	True	ATTAAA	-18	NA	95466929	95495170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95473931_95473996_95474994_95475036_95478219_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.20	chr3	+	1410	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	91.2436746479739	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466988	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488795_95488902_95492450_95492526_95494691
ES.22091.21	chr3	+	3384	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	0	189	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	123.59097414006	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	NA	False	NA	8	True	ATTAAA	-19	NA	95466988	95495171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467381_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95493210
ES.22091.22	chr3	+	1319	14	ISM	ENSMUSG00000028109.15	ENSMUST00000090797.11	1511	16	1	2302	0	-429	5prime_fragment	FALSE	canonical	3	40	junction_1	84.0520407969383	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	95466988	95492680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450
ES.22091.23	chr3	+	1766	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	187	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	105.267194425529	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466989	95495169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.25	chr3	+	1383	14	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.4968574550144	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466989	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475049_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.26	chr3	+	3552	14	ISM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	1	-2	1	-2	intron_retention	FALSE	canonical	3	195	junction_6	46.8710935255838	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466989	95494905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450
ES.22091.27	chr3	+	1720	13	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_6	134.46963721723	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466989	95494905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467381_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95482799_95482914_95483587_95483740_95485363_95485612_95487315_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.28	chr3	+	1642	15	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.159277078831	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466989	95495169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482844_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.29	chr3	+	1510	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	108.621953991304	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466989	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467247_95468531_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.3	chr3	+	1572	16	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	124.771506718837	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466940	95494905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95493210_95493357_95494691
ES.22091.30	chr3	+	1739	15	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	1	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.916089908061	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466989	95495169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.31	chr3	+	3234	15	FSM	ENSMUSG00000028109.15	ENSMUST00000171191.6	1437	15	1	-1798	1	0	multi-exon	FALSE	canonical	3	21	junction_14	86.2158243441826	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466989	95494907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845
ES.22091.32	chr3	+	183	1	Intergenic	novelGene_18234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95477264	95477447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95477300_95477400
ES.22091.33	chr3	+	4649	6	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	14757	189	intron_retention	FALSE	canonical	3	219	junction_5	40.0729335087912	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	502	False	NA	8	True	ATTAAA	-19	NA	95481745	95495171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.34	chr3	+	184	1	Intergenic	novelGene_18235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCACATTCCTTTCC	746	False	NA	8	True	NA	NA	NA	95481989	95482173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95482000_95482200
ES.22091.35	chr3	+	187	2	Genic_Genomic	ENSMUSG00000106383.2	novel	1742	1	NA	NA	-64623	-1117	multi-exon	FALSE	non_canonical	0	0	junction_1	0	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATACTGG	748	False	NA	NA	False	NA	NA	NA	95481991	95547239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95482152_95547212
ES.22091.36	chr3	+	2189	4	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	18742	-1	intron_retention	FALSE	canonical	3	219	junction_3	48.3758433747901	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	4487	False	NA	NA	False	AATAAA	-14	NA	95485730	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.37	chr3	+	2199	2	NNC	ENSMUSG00000046519.16	novel	2652	4	NA	NA	-18	3	intron_retention	FALSE	canonical	0	0	junction_1	0	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTACATGGTTTTTT	NA	False	NA	12	True	AATAAA	-23	NA	95496226	95526561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95496248_95524383
ES.22091.38	chr3	+	2844	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	0	-8	0	3	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTACATGGTTTTTT	NA	False	NA	12	True	AATAAA	-23	NA	95496244	95526561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
ES.22091.39	chr3	+	1900	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	7	929	7	749	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTCAGTATGTGACTG	NA	False	NA	NA	False	ATTAAA	-12	NA	95496251	95525624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
ES.22091.4	chr3	+	1079	11	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-47	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	132.578127909546	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466940	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95467044_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95494691
ES.22091.40	chr3	+	2951	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	45	-160	-2	155	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCGGCTTGTACATGGT	NA	False	NA	NA	False	NA	NA	NA	95496289	95526713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
ES.22091.41	chr3	+	175	1	Intergenic	novelGene_18237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACC	18	False	NA	NA	False	NA	NA	NA	95499880	95500055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95499900_95500100
ES.22091.42	chr3	+	3907	1	Intergenic	novelGene_18239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGTAAGGAGGTTCAGA	2019	False	NA	NA	False	NA	NA	NA	95501912	95505819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95501900_95505800
ES.22091.43	chr3	+	176	1	Intergenic	novelGene_18240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGAAAGTATTCATA	1929	False	NA	NA	False	NA	NA	NA	95504466	95504642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95504500_95504600
ES.22091.44	chr3	+	1693	1	Intergenic	novelGene_18241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAATATCAGTCTCCT	6964	False	NA	NA	False	AATATA	-9	NA	95509501	95511194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95509500_95511200
ES.22091.45	chr3	+	2314	1	Intergenic	novelGene_18242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9740	False	NA	NA	False	GATAAA	-4	NA	95512277	95514591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95512300_95514600
ES.22091.46	chr3	+	2286	2	ISM	ENSMUSG00000046519.16	ENSMUST00000176541.2	2053	5	18969	0	18960	0	intron_retention	FALSE	canonical	1	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTTCTCTCTGTACA	NA	False	NA	3	True	AATAAA	-14	NA	95515260	95526552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95515349_95524354
ES.22091.47	chr3	+	143	1	FSM	ENSMUSG00000060438.6	ENSMUST00000074353.6	495	1	387	-35	387	35	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAAG	493	False	NA	12	True	AATAAA	-5	NA	95529975	95530118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95530000_95530100
ES.22091.48	chr3	+	2321	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-74	1598	-47	-1598	multi-exon	FALSE	canonical	3	422	junction_2	58	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCGAATTCTGTACC	335	False	NA	33	True	NA	NA	NA	95532256	95537815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532488_95534059_95534186_95535851
ES.22091.49	chr3	+	1192	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	-48	-14	-30	14	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGTTGTGAAGCAGTT	352	False	NA	24	True	AATAAA	-35	NA	95532273	95539427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
ES.22091.5	chr3	+	1538	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.930247608559	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTTTACCTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95466941	95494905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468269_95468378_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475049_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.50	chr3	+	3933	2	FSM	ENSMUSG00000038619.13	ENSMUST00000197050.2	937	2	-44	-2952	-11	-1616	multi-exon	FALSE	canonical	3	538	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTCTTCATCTCCGAT	371	False	NA	15	True	NA	NA	NA	95532292	95537797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532488_95534059
ES.22091.51	chr3	+	1032	3	NIC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	25.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	372	False	NA	10	True	AATAAA	-21	NA	95532293	95539413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95532488_95535851_95536019_95538742
ES.22091.52	chr3	+	3896	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-37	-14	-10	14	multi-exon	FALSE	canonical	3	422	junction_2	58	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGTTGTGAAGCAGTT	372	False	NA	24	True	AATAAA	-35	NA	95532293	95539427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532488_95534059_95534186_95535851
ES.22091.53	chr3	+	7082	1	FSM	ENSMUSG00000038619.13	ENSMUST00000199421.2	998	1	0	-6084	0	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAACAAAAAAT	382	False	NA	-18	True	NA	NA	NA	95532303	95539385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532300_95539400
ES.22091.54	chr3	+	657	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	1	-1611	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	230.317172612031	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATCTCCGATCTTCT	383	False	NA	20	True	NA	NA	NA	95532304	95537802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537684
ES.22091.55	chr3	+	2263	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	231.406568618957	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	383	False	NA	10	True	AATAAA	-21	NA	95532304	95539413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537689
ES.22091.56	chr3	+	4704	5	Fusion	ENSMUSG00000038612.17_ENSMUSG00000038619.13	novel	1130	4	NA	NA	8	1116	intron_retention	FALSE	canonical	0	0	junction_3	283.943986553686	1095	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGCCAAGCTTTGTT	390	False	NA	34	True	AATAAA	-25	NA	95532311	95569250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95532488_95534059_95534186_95535851_95536019_95564742_95566799_95567071
ES.22091.57	chr3	+	3750	2	NIC	ENSMUSG00000038619.13	novel	3845	3	NA	NA	-9	13	intron_retention	FALSE	canonical	3	7	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTGTTGTGAAGCAGT	391	False	NA	23	True	AATAAA	-34	NA	95532312	95539426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95532488_95535851
ES.22091.58	chr3	+	2104	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	-15	1756	-6	-1756	multi-exon	FALSE	canonical	3	422	junction_2	58	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGCTGTCATCCTTAA	394	False	NA	NA	False	NA	NA	NA	95532315	95537657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95532488_95534059_95534186_95535851
ES.22091.59	chr3	+	1938	5	Fusion	ENSMUSG00000038612.17_ENSMUSG00000038619.13	novel	1130	4	NA	NA	2	1116	multi-exon	FALSE	canonical	0	0	junction_3	274.588328229734	1095	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGCCAAGCTTTGTT	402	False	NA	34	True	AATAAA	-25	NA	95532323	95569250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_95532488_95534059_95534186_95535851_95536019_95567071_95567320_95568017
ES.22091.6	chr3	+	1275	13	NNC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	134.932596341861	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTTACCTGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	95466943	95494906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467035_95468538_95468592_95473931_95473996_95474994_95475032_95478221_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.60	chr3	+	631	5	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	2	-1605	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	225.514411956309	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCGATCTTCTCGAATT	402	False	NA	26	True	NA	NA	NA	95532323	95537808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95532488_95534059_95534186_95535851_95536019_95536546_95536610_95537697
ES.22091.62	chr3	+	2271	3	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	410	-1610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCTCCGATCTTCTC	825	False	NA	21	True	NA	NA	NA	95532746	95537803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95532940_95534059_95534186_95535851
ES.22091.63	chr3	+	3880	3	NNC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	411	0	intron_retention	FALSE	canonical	0	0	junction_1	211	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	826	False	NA	10	True	AATAAA	-21	NA	95532747	95539413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95532940_95534059_95534186_95535851
ES.22091.64	chr3	+	169	1	FSM	ENSMUSG00000106383.2	ENSMUST00000200640.2	1742	1	455	1118	455	-1118	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGACATACTG	270	False	NA	NA	False	NA	NA	NA	95547069	95547238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95547100_95547200
ES.22091.65	chr3	+	3085	1	FSM	ENSMUSG00000106383.2	ENSMUST00000200640.2	1742	1	660	-2003	660	2003	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAACAGAAGAAATCCAGC	34	False	NA	NA	False	NA	NA	NA	95547274	95550359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95547300_95550400
ES.22091.66	chr3	+	137	1	Intergenic	novelGene_18244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAATATAAAAG	2918	False	NA	NA	False	NA	NA	NA	95553045	95553182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95553000_95553200
ES.22091.67	chr3	+	245	1	Intergenic	novelGene_18246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTCATGAGTGCAAT	738	False	NA	NA	False	NA	NA	NA	95555215	95555460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95555200_95555500
ES.22091.68	chr3	+	1101	1	Intergenic	novelGene_18247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAGAAAGAAACCACC	1905	False	NA	NA	False	NA	NA	NA	95558247	95559348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95558200_95559300
ES.22091.69	chr3	+	2508	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-323	1233	-323	1120	multi-exon	FALSE	canonical	3	754	junction_2	15.5	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAAGCTTTGTTTTGA	6094	False	NA	38	True	AATAAA	-29	NA	95565775	95569254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95566799_95567071_95567320_95568017
ES.22091.7	chr3	+	1689	15	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-27	189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.7207385357915	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGTGTGTTATTAACAA	NA	False	NA	8	True	ATTAAA	-19	NA	95466960	95495171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95467044_95468530_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.70	chr3	+	3532	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-107	-7	-107	7	multi-exon	FALSE	canonical	3	754	junction_2	15.5	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTATGGGTCTTTTC	6310	False	NA	21	True	AATAAA	-21	NA	95565991	95570494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95566799_95567071_95567320_95568017
ES.22091.71	chr3	+	4462	1	Genic_Genomic	ENSMUSG00000038612.17	novel	NA	NA	NA	NA	-69	4	mono-exon	FALSE	NA	NA	NA	NA	NA	805	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTGTGGTATGGGTCTT	6348	False	NA	18	True	AATAAA	-18	NA	95566029	95570491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95566000_95570500
ES.22091.72	chr3	+	1384	4	NNC	ENSMUSG00000038612.17	novel	858	4	NA	NA	-69	192	intron_retention	FALSE	canonical	2	4	junction_3	367.461864990399	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCTGGAAGAGTCACT	6348	False	NA	34	True	AATAAA	-16	NA	95566029	95568326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95566799_95567071_95567320_95567540_95567599_95568017
ES.22091.73	chr3	+	4188	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-69	-3	-69	3	intron_retention	FALSE	canonical	3	785	junction_1	0	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGTGGTATGGGTCT	6348	False	NA	17	True	AATAAA	-17	NA	95566029	95570490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95566799_95567071
ES.22091.74	chr3	+	1099	1	Genic_Genomic	ENSMUSG00000038612.17	novel	NA	NA	NA	NA	-52	-989	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATGGCGTAACAAACTG	6365	False	NA	NA	False	NA	NA	NA	95566046	95567145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95566000_95567100
ES.22091.75	chr3	+	3197	1	Genic_Genomic	ENSMUSG00000038612.17	novel	NA	NA	NA	NA	-45	1116	mono-exon	FALSE	NA	NA	NA	NA	NA	784	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGCCAAGCTTTGTT	6372	False	NA	34	True	AATAAA	-25	NA	95566053	95569250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95566100_95569200
ES.22091.76	chr3	+	1302	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-44	2160	-44	193	multi-exon	FALSE	canonical	3	754	junction_2	15.5	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCTGGAAGAGTCACTG	6373	False	NA	35	True	AATAAA	-17	NA	95566054	95568327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95566799_95567071_95567320_95568017
ES.22091.77	chr3	+	2848	4	NNC	ENSMUSG00000038612.17	novel	3418	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	362.966481464428	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	6373	False	NA	14	True	AATAAA	-14	NA	95566054	95570487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95566160_95566773_95566799_95567071_95567320_95568017
ES.22091.79	chr3	+	3937	3	NNC	ENSMUSG00000038612.17	novel	3418	3	NA	NA	-42	0	intron_retention	FALSE	canonical	2	7	junction_2	389	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	6375	False	NA	14	True	AATAAA	-14	NA	95566056	95570487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95566799_95567071_95567320_95567540
ES.22091.8	chr3	+	1524	14	NIC	ENSMUSG00000028109.15	novel	1511	16	NA	NA	-26	187	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	111.74257186437	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAGTGTGTTATTAAC	NA	False	NA	6	True	ATTAAA	-17	NA	95466961	95495169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95467035_95468538_95468592_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22091.80	chr3	+	2817	3	NNC	ENSMUSG00000038612.17	novel	3418	3	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	377	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTAAGGTGTGGTATGG	6386	False	NA	13	True	AATAAA	-13	NA	95566067	95570486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95566160_95567063_95567320_95568017
ES.22091.81	chr3	+	3331	4	NNC	ENSMUSG00000038612.17	novel	3418	3	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_1	362.966481464428	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	6387	False	NA	14	True	AATAAA	-14	NA	95566068	95570487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95566443_95566559_95566799_95567071_95567320_95568017
ES.22091.82	chr3	+	1453	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	-8	1973	-8	380	multi-exon	FALSE	canonical	3	754	junction_2	15.5	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGTGTTGAGAGAGAAG	6409	False	NA	NA	False	AATAAA	-16	NA	95566090	95568514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95566799_95567071_95567320_95568017
ES.22091.83	chr3	+	468	2	ISM	ENSMUSG00000038612.17	ENSMUST00000178686.2	858	4	210	1016	210	-1016	internal_fragment	FALSE	canonical	3	785	junction_1	0	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCGAGTAATGGTCCA	6696	False	NA	NA	False	ATTAAA	-22	NA	95566377	95567118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95566799_95567071
ES.22091.86	chr3	+	1618	2	ISM	ENSMUSG00000038612.17	ENSMUST00000178686.2	858	4	767	-1116	767	1116	3prime_fragment	FALSE	canonical	3	754	junction_1	0	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGCCAAGCTTTGTT	7253	False	NA	34	True	AATAAA	-25	NA	95566934	95569250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95567320_95568017
ES.22091.87	chr3	+	2851	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	843	-3	774	3	3prime_fragment	FALSE	canonical	3	754	junction_1	0	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGTGGTATGGGTCT	7260	False	NA	17	True	AATAAA	-17	NA	95566941	95570490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95567320_95568017
ES.22091.88	chr3	+	813	2	ISM	ENSMUSG00000038612.17	ENSMUST00000178686.2	858	4	853	-397	853	397	3prime_fragment	FALSE	canonical	3	754	junction_1	0	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCTAATTAACAACGTT	7339	False	NA	NA	False	AATAAA	-33	NA	95567020	95568531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95567320_95568017
ES.22091.89	chr3	+	2776	2	ISM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	1042	-127	973	127	3prime_fragment	FALSE	canonical	3	754	junction_1	0	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAGGACCTGTAATTT	7459	False	NA	NA	False	AATAAA	-35	NA	95567140	95570614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95567320_95568017
ES.22091.9	chr3	+	1476	13	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	-21	188	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	97.7017854948869	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAGTGTGTTATTAACA	NA	False	NA	7	True	ATTAAA	-18	NA	95466966	95495170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95467044_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ES.22092.1	chr3	-	157	1	Intergenic	novelGene_18236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	95495378	95495221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95495200_95495400
ES.22093.1	chr3	-	1219	1	Intergenic	novelGene_18238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAATGAG	9556	False	NA	NA	False	NA	NA	NA	95502307	95501088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95501100_95502300
ES.22094.1	chr3	-	455	1	Intergenic	novelGene_18243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAAAGAGA	9786	False	NA	NA	False	NA	NA	NA	95519759	95519304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95519300_95519800
ES.22095.1	chr3	-	1479	1	Antisense	novelGene_ENSMUSG00000060438.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCATGATTCTACCAGGG	9395	False	NA	NA	False	NA	NA	NA	95529820	95528341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95528300_95529800
ES.22096.1	chr3	-	2795	2	Intergenic	novelGene_18245	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95557046	95554126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95555068_95555192
ES.22097.1	chr3	-	6180	2	Antisense	novelGene_ENSMUSG00000038612.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTTGTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	95566845	95560601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95563750_95563813
ES.22097.2	chr3	-	1673	1	Antisense	novelGene_ENSMUSG00000038612.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGCCTGGCCAAAATGA	NA	False	NA	NA	False	NA	NA	NA	95566965	95565292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95565300_95567000
ES.22098.1	chr3	-	3131	1	Intergenic	novelGene_18248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTTGTTTTAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	95576261	95573130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95573100_95576300
ES.22099.1	chr3	+	7686	1	Antisense	novelGene_ENSMUSG00000015850.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGACTGTTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	95582337	95590023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95582300_95590000
ES.22099.2	chr3	+	2836	10	Antisense	novelGene_ENSMUSG00000015850.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATTTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	95584231	95590016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95584280_95584420_95584566_95584837_95585020_95585119_95585318_95586899_95587508_95587755_95587882_95588043_95588236_95588336_95588446_95588569_95588743_95588961
ES.221.1	chr1	+	3987	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33632535	33636522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33632500_33636500
ES.2210.1	chr1	+	3263	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	-36	0	-36	0	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	False	NA	29	True	TATAAA	-40	NA	191553519	191565162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.10	chr1	+	674	3	ISM	ENSMUSG00000026622.16	ENSMUST00000126446.8	2044	6	2	5575	2	-3108	5prime_fragment	FALSE	canonical	3	453	junction_1	30	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACATGTCTCCTGTGAG	NA	False	NA	NA	False	ATTAAA	-41	NA	191553623	191554829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191553854_191554258_191554477_191554603
ES.2210.11	chr1	+	3062	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	184.336980687489	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCACTGTGATGTTTGT	NA	False	NA	24	True	TATAAA	-35	NA	191553625	191565157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554408_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
ES.2210.13	chr1	+	4743	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	5	1608	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATCTAGGAAATAGTT	NA	False	NA	NA	False	AATAAA	-8	NA	191553626	191566770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
ES.2210.14	chr1	+	4779	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	71	-1623	5	1623	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTGTGTGAACCCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	191553626	191566785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.15	chr1	+	4099	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	78	-950	12	950	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATCATTTGTCTTCA	NA	False	NA	NA	False	NA	NA	NA	191553633	191566112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.16	chr1	+	2724	9	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	38	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	151.790151195656	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTGGAAATTTATCAC	NA	False	NA	12	True	TATAAA	-23	NA	191553659	191565145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248_191563784_191564165
ES.2210.17	chr1	+	3012	7	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	617	3	-121	-3	3prime_fragment	FALSE	canonical	3	373	junction_6	44.2219779446073	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGTGATGTTTGTAT	NA	False	NA	26	True	TATAAA	-37	NA	191554172	191565159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.18	chr1	+	2669	3	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	-414	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	186	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTGATGTTTGTATT	NA	False	NA	27	True	TATAAA	-38	NA	191558845	191565160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191559482_191561508_191561630_191563248
ES.2210.19	chr1	+	5730	1	NIC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	170	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGTGATGTTTGTAT	NA	False	NA	26	True	TATAAA	-37	NA	191559429	191565159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_191559400_191565200
ES.2210.2	chr1	+	3171	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTGATGTTTGTATT	NA	False	NA	27	True	TATAAA	-38	NA	191553588	191565160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
ES.2210.20	chr1	+	2743	2	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	7237	8	1533	-8	3prime_fragment	FALSE	canonical	3	373	junction_1	0	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATCACTGTGATGTT	NA	False	NA	21	True	TATAAA	-32	NA	191560792	191565154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191561630_191563248
ES.2210.4	chr1	+	5277	6	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	-11	-23	intron_retention	FALSE	canonical	3	82	junction_5	145.548067661512	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTATTTTGTGGAAATT	NA	False	NA	6	True	TATAAA	-17	NA	191553610	191565139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554845_191557594_191557678_191558334_191558462_191559261_191561630_191563269
ES.2210.6	chr1	+	3534	9	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	-7	1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	151.790151195656	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGTGTGTGAACCCT	NA	False	NA	NA	False	AATAAA	-21	NA	191553614	191566783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248_191563734_191564988
ES.2210.7	chr1	+	3152	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	157.621090477338	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGTGATGTTTGTAT	NA	False	NA	26	True	TATAAA	-37	NA	191553621	191565159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557600_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.8	chr1	+	3029	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	67	131	1	-131	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGTATGAGGTCTTAA	NA	False	NA	NA	False	AGTAAA	-18	NA	191553622	191565031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ES.2210.9	chr1	+	4774	7	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	68	4	2	-4	intron_retention	FALSE	canonical	3	416	junction_5	31.4823583755869	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACTGTGATGTTTGTA	NA	False	NA	25	True	TATAAA	-36	NA	191553623	191565158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503
ES.22100.1	chr3	-	3898	18	FSM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	-37	-5	22	2	multi-exon	TRUE	canonical	1	3	junction_17	6.21918006589627	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTCGTTATGTTCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	95595206	95583508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592864_95595131
ES.22100.2	chr3	-	4037	18	FSM	ENSMUSG00000015850.12	ENSMUST00000117782.8	4036	18	-4	3	-4	0	multi-exon	FALSE	canonical	1	3	junction_17	6.21918006589627	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95595232	95583513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
ES.22100.3	chr3	-	3527	18	NNC	ENSMUSG00000015850.12	novel	4036	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.7996539704346	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95595187	95583513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588651_95588961_95589167_95589519_95589657_95590617_95590721_95591315_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
ES.22100.4	chr3	-	3669	17	NNC	ENSMUSG00000015850.12	novel	4036	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.68925210692496	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95595161	95583513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588651_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
ES.22100.5	chr3	-	3979	18	NNC	ENSMUSG00000015850.12	novel	4036	18	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	6.44540554155871	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTCTTCGTTATG	NA	False	NA	NA	False	ATTAAA	-14	NA	95595214	95583514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592943_95595131
ES.22100.7	chr3	-	3994	15	NIC	ENSMUSG00000015850.12	novel	4036	18	NA	NA	2839	-2	intron_retention	FALSE	canonical	1	4	junction_6	5.13292692092048	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACATGCTCTTCGTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	95592330	95583515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95584280_95584420_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268
ES.22101.1	chr3	+	177	1	Intergenic	novelGene_18249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	9121	False	NA	NA	False	NA	NA	NA	95598160	95598337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95598200_95598300
ES.22102.1	chr3	+	3942	1	Intergenic	novelGene_18250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGGTAACCATGTTTG	NA	False	NA	NA	False	NA	NA	NA	95602863	95606805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95602900_95606800
ES.22103.1	chr3	-	2733	1	Intergenic	novelGene_18251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95630780	95628047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95628000_95630800
ES.22104.1	chr3	-	1822	11	NNC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.94788059459674	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTTGTCTTTAGTGC	6909	False	NA	NA	False	AATAAA	-18	NA	95646877	95641459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644030_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ES.22104.10	chr3	-	2449	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	-35	-14	-23	14	multi-exon	FALSE	canonical	1	178	junction_5	104.738626737206	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTCCGAATGCTTTA	NA	False	NA	-5	True	AATAAA	-30	NA	95662218	95647273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.11	chr3	-	2124	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	14	combination_of_known_splicesites	FALSE	canonical	1	19	junction_7	193.239333470181	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTCCGAATGCTTTA	NA	False	NA	-5	True	AATAAA	-30	NA	95662174	95647273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.13	chr3	-	4547	15	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_8	203.140056741799	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662190	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95656636_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.14	chr3	-	3177	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-22	2	intron_retention	FALSE	canonical	1	178	junction_5	107.035752642517	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662217	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.15	chr3	-	6397	13	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_5	176.742967013935	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653097_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95657730_95658012_95660443_95661683_95661828_95662069
ES.22104.16	chr3	-	2818	15	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	2	intron_retention	FALSE	canonical	1	6	junction_4	175.450513402102	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662182	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649722_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95662069
ES.22104.17	chr3	-	5526	13	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	2	intron_retention	FALSE	canonical	1	178	junction_5	111.497259557753	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798_95655946_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.18	chr3	-	2752	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	2	intron_retention	FALSE	canonical	1	37	junction_8	172.839491424612	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662182	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.19	chr3	-	4035	13	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	2	intron_retention	FALSE	canonical	1	8	junction_9	213.936955277328	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.2	chr3	-	2370	11	FSM	ENSMUSG00000028108.17_ENSMUSG00000028107.15	ENSMUST00000117507.10	1901	11	-470	1	-470	0	multi-exon	FALSE	canonical	0	0	junction_8	2.86530975637888	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTTGTCTTTAGTGC	6435	False	NA	NA	False	AATAAA	-18	NA	95647351	95641459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ES.22104.20	chr3	-	2805	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	2	intron_retention	FALSE	canonical	1	37	junction_8	159.563243171567	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662182	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.21	chr3	-	4505	16	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_12	198.203554178246	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662182	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95656529_95656636_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.22	chr3	-	3024	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	2	intron_retention	FALSE	canonical	1	178	junction_5	103.251279249541	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662183	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.23	chr3	-	5576	14	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1	2	intron_retention	FALSE	canonical	1	178	junction_5	118.466233673187	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662162	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95655453_95655798_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.24	chr3	-	5166	15	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_11	202.278248449798	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTTCATCTGAGT	NA	False	NA	-17	True	AATAAA	-18	NA	95662182	95647285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649536_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95656636_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.25	chr3	-	2079	16	NIC	ENSMUSG00000028107.15	novel	2157	16	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	51	junction_13	165.179848111754	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662157	95647286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661683_95661828_95662069
ES.22104.26	chr3	-	2970	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	1	intron_retention	FALSE	canonical	1	170	junction_14	127.96273763179	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGCCTTCATCTGAG	NA	False	NA	-18	True	AATAAA	-17	NA	95662183	95647286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.27	chr3	-	4397	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	178	junction_5	105.389196092679	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.29	chr3	-	6348	9	NIC	ENSMUSG00000028107.15	novel	3614	12	NA	NA	-1325	0	intron_retention	FALSE	canonical	1	178	junction_5	118.73335409648	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95659589	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798
ES.22104.3	chr3	-	1977	10	NIC	ENSMUSG00000028108.17	novel	1901	11	NA	NA	145	0	intron_retention	FALSE	canonical	0	0	junction_7	2.8588178511708	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTTGTCTTTAGTGC	7075	False	NA	NA	False	AATAAA	-18	NA	95646711	95641459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645426_95645550_95645614_95646684
ES.22104.30	chr3	-	2303	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_14	185.097904836873	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95660318_95660443_95661630_95661828_95662069
ES.22104.32	chr3	-	3627	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	178	junction_5	109.98339392279	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.33	chr3	-	2559	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	178	junction_4	107.557542738759	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.34	chr3	-	2178	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	10	junction_13	176.355812064643	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95660318_95660443_95662069
ES.22104.35	chr3	-	2268	18	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	25	junction_11	159.314882650398	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.36	chr3	-	4095	5	NIC	ENSMUSG00000028107.15	novel	3614	12	NA	NA	2484	0	intron_retention	FALSE	canonical	3	509	junction_4	21.7987958383026	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	6209	False	NA	-19	True	AATAAA	-16	NA	95653360	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95653175_95653344
ES.22104.37	chr3	-	2942	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	25	junction_11	156.34611177342	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.38	chr3	-	2231	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	47	junction_13	159.808821330363	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95662069
ES.22104.39	chr3	-	2432	18	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	47	junction_13	145.096698456975	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662186	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.4	chr3	-	3571	27	Fusion	ENSMUSG00000028107.15_ENSMUSG00000028108.17	novel	3228	11	NA	NA	-2	0	multi-exon	TRUE	canonical	0	0	junction_7	245.985314903002	462	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCGTTGTCTTTAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	95662185	95641460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95641784_95642134_95642223_95642510_95642732_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95645741_95645928_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.40	chr3	-	3084	12	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1520	0	intron_retention	FALSE	canonical	0	0	junction_8	182.277057305177	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95659784	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95653883_95655353_95655453_95655798_95655946_95657650_95657730_95658012
ES.22104.41	chr3	-	2313	17	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_13	159.794350259951	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653064_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.42	chr3	-	2338	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	19	junction_7	159.270782701104	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.43	chr3	-	6492	11	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	5	0	intron_retention	FALSE	canonical	1	19	junction_6	191.280448556563	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662190	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344_95653483_95654750_95655453_95655798_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.44	chr3	-	2421	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	25	junction_11	152.859361424154	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.45	chr3	-	1791	14	NIC	ENSMUSG00000028107.15	novel	2157	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_9	229.279628246807	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ES.22104.46	chr3	-	2374	18	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	154.086772839247	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662162	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653166_95653340_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.47	chr3	-	6500	11	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	178	junction_5	114.113496134331	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95655453_95655798_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.48	chr3	-	2500	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.49	chr3	-	4104	14	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	184.328109823233	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653386_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95660443_95662069
ES.22104.5	chr3	-	4138	26	Fusion	ENSMUSG00000028107.15_ENSMUSG00000028108.17	novel	2400	18	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_2	246.055063756063	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCGTTGTCTTTAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	95662183	95641460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95641784_95642134_95642223_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.50	chr3	-	4112	14	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	25	junction_10	202.949464663252	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662194	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.51	chr3	-	2885	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	178	junction_5	107.532858027468	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.53	chr3	-	2858	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	19	junction_7	163.129846866769	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.55	chr3	-	2344	18	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	170	junction_16	123.993944488818	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662180	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.56	chr3	-	5116	9	NIC	ENSMUSG00000028107.15	novel	3614	12	NA	NA	-216	0	intron_retention	FALSE	canonical	1	178	junction_4	131.884359857414	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	1089	False	NA	-19	True	AATAAA	-16	NA	95658480	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798_95657730_95658012
ES.22104.57	chr3	-	6178	12	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1	0	intron_retention	FALSE	canonical	1	178	junction_5	117.494153186692	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662162	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.58	chr3	-	3958	13	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	19	junction_7	216.758057648512	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662182	95647287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95660443_95662069
ES.22104.59	chr3	-	2183	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	146.808628265962	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662183	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.6	chr3	-	10261	19	Fusion	ENSMUSG00000028107.15_ENSMUSG00000028108.17	novel	2400	18	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_4	237.802964657718	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTCGTTGTCTTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	95662157	95641461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95641784_95642134_95644370_95644944_95645026_95645119_95645201_95645323_95645426_95645550_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.60	chr3	-	3250	8	NNC	ENSMUSG00000028107.15	novel	3614	12	NA	NA	-314	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	244.158279208636	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	3411	False	NA	-20	True	AATAAA	-15	NA	95656158	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649727_95649889_95649991_95653096_95653166_95653344_95653483_95653846
ES.22104.62	chr3	-	4900	6	NIC	ENSMUSG00000028107.15	novel	3614	12	NA	NA	992	-1	intron_retention	FALSE	canonical	1	178	junction_4	148.584790607922	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	2297	False	NA	-20	True	AATAAA	-15	NA	95657272	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344
ES.22104.63	chr3	-	5176	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-1	intron_retention	FALSE	canonical	1	170	junction_13	135.290616897138	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.64	chr3	-	3594	10	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-742	-1	intron_retention	FALSE	canonical	1	37	junction_6	187.616498787511	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	563	False	NA	-20	True	AATAAA	-15	NA	95659006	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012
ES.22104.65	chr3	-	3052	16	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-1	intron_retention	FALSE	canonical	2	121	junction_5	115.277520213902	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653064_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.66	chr3	-	2084	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-1	intron_retention	FALSE	canonical	1	37	junction_8	171.790347427868	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95662069
ES.22104.67	chr3	-	1691	13	NIC	ENSMUSG00000028107.15	novel	2157	16	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_8	211.973399798706	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ES.22104.68	chr3	-	2277	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	-1	intron_retention	FALSE	canonical	1	166	junction_15	129.152863778633	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662157	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95662069
ES.22104.69	chr3	-	2017	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	14	junction_7	161.606463017074	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.7	chr3	-	1940	3	ISM	ENSMUSG00000028108.17	ENSMUST00000029753.14	1895	11	2839	2	1495	-1	intron_retention	FALSE	canonical	2	4	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTCGTTGTCTTTAGT	9746	False	NA	NA	False	AATAAA	-16	NA	95644040	95641461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95641784_95642134_95642223_95642510
ES.22104.70	chr3	-	1937	15	NIC	ENSMUSG00000028107.15	novel	2157	16	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	37	junction_8	192.764633897488	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662182	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ES.22104.71	chr3	-	2191	17	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	177.123621642484	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662179	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653098_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95662074
ES.22104.72	chr3	-	3301	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	-1	intron_retention	FALSE	canonical	1	25	junction_10	161.714916707502	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTGCCTTCATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	95662157	95647288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95655453_95655798_95655867_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.73	chr3	-	2270	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	156.22734835809	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662157	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.76	chr3	-	2995	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_3	155.928256239047	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662182	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649536_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.77	chr3	-	2148	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	37	junction_8	152.565342046449	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662151	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.78	chr3	-	4235	14	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	19	junction_7	168.965386322607	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662185	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.79	chr3	-	5675	13	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-2	intron_retention	FALSE	canonical	1	178	junction_5	118.075540792043	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662182	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.8	chr3	-	2179	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	-8	-14	4	14	multi-exon	FALSE	canonical	1	51	junction_13	151.691997884602	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTCCGAATGCTTTA	NA	False	NA	-5	True	AATAAA	-30	NA	95662191	95647273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ES.22104.80	chr3	-	3993	13	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	205.869075844064	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662162	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653097_95653175_95653344_95653483_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95660443_95661630_95661828_95662069
ES.22104.81	chr3	-	4048	15	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	-2	intron_retention	FALSE	canonical	1	19	junction_7	199.251264303468	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662195	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95657730_95658012_95658292_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.83	chr3	-	4239	15	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	-2	intron_retention	FALSE	canonical	1	25	junction_1	217.945801631919	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662183	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648339_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655867_95657650_95657730_95658012_95658078_95658178_95660443_95661683_95661828_95662069
ES.22104.84	chr3	-	1919	14	NIC	ENSMUSG00000028107.15	novel	2157	16	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	204.469525803354	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGTGCCTTCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	95662193	95647289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ES.22104.86	chr3	-	3461	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	2	-3	intron_retention	FALSE	canonical	1	47	junction_11	166.136971602751	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGCTGTGCCTTCATC	NA	False	NA	-22	True	AATAAA	-13	NA	95662145	95647290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95661683_95661828_95662069
ES.22104.87	chr3	-	2260	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	1	19	junction_7	184.196184474598	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGGCTGTGCCTTCA	NA	False	NA	-24	True	AATAAA	-11	NA	95662182	95647292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.88	chr3	-	2192	17	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	213.478912527092	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGGCTGTGCCTTCA	NA	False	NA	-24	True	AATAAA	-11	NA	95662182	95647292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649722_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655870_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.89	chr3	-	2862	18	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	153.974450763395	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGGCTGTGCCTTCA	NA	False	NA	-24	True	AATAAA	-11	NA	95662182	95647292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657182_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.9	chr3	-	2952	14	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	4	14	intron_retention	FALSE	canonical	1	37	junction_7	164.984919518843	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTCCGAATGCTTTA	NA	False	NA	-5	True	AATAAA	-30	NA	95662157	95647273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
ES.22104.91	chr3	-	2160	13	ISM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	1	5313	1	496	5prime_fragment	FALSE	canonical	3	372	junction_8	78.9650063143303	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGAGCAAGCTGCTGC	NA	False	NA	NA	False	NA	NA	NA	95662182	95652600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ES.22105.1	chr3	+	106	1	Intergenic	novelGene_18252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	2606	False	NA	NA	False	NA	NA	NA	95664795	95664901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95664800_95664900
ES.22106.1	chr3	+	9412	2	Genic_Genomic	ENSMUSG00000105093.2	novel	895	1	NA	NA	-1502	9383	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95710664	95722444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95715051_95717418
ES.22106.2	chr3	+	259	1	Intergenic	novelGene_18255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	95715052	95715311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95715100_95715300
ES.22107.1	chr3	+	1031	1	Intergenic	novelGene_18256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCTCTGAAAAGTCT	7062	False	NA	NA	False	AATAAA	-10	NA	95726218	95727249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95726200_95727200
ES.22107.2	chr3	+	866	1	Intergenic	novelGene_18258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTAACCATTAC	7718	False	NA	NA	False	NA	NA	NA	95726874	95727740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95726900_95727700
ES.22108.1	chr3	+	178	1	Intergenic	novelGene_18259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95730867	95731045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95730900_95731000
ES.22108.2	chr3	+	176	2	Intergenic	novelGene_18260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAGAATCTGACT	NA	False	NA	NA	False	NA	NA	NA	95730868	95735595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95731027_95735577
ES.22109.1	chr3	+	3775	5	Antisense	novelGene_ENSMUSG00000015748.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTCTAATTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	95752724	95761985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_95754908_95755076_95755163_95756228_95756373_95758873_95759009_95760758
ES.2211.1	chr1	-	1576	1	FSM	ENSMUSG00000102840.2	ENSMUST00000192600.2	1624	1	45	3	45	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGTATAAGCTAATT	NA	False	NA	NA	False	NA	NA	NA	191554060	191552484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191552500_191554100
ES.22110.1	chr3	-	3399	12	Fusion	ENSMUSG00000028106.14_ENSMUSG00000028107.15	novel	7756	11	NA	NA	-40	-356	multi-exon	FALSE	canonical	0	0	junction_2	45.0802773389725	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAACTTCCACTTCCTG	9970	False	NA	NA	False	AATAAA	-20	NA	95726130	95662473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95663743_95667396_95667503_95673312_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.10	chr3	-	5034	11	NNC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-88	-2714	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	40.8210729893275	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGCTTTCCTCTTTCCT	9924	False	NA	NA	False	NA	NA	NA	95726263	95670366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95683963_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.11	chr3	-	5413	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-536	-2930	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGGGGTGTTATTTGG	9991	False	NA	0	True	AATAAA	-29	NA	95726711	95670582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.12	chr3	-	5302	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-745	2941	-514	-2941	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACGTGCAATGTTGGG	10013	False	NA	-11	True	AATAAA	-18	NA	95726689	95670593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.13	chr3	-	6695	27	Fusion	ENSMUSG00000028106.14_ENSMUSG00000015748.14	novel	2933	16	NA	NA	9	-2941	multi-exon	FALSE	canonical	0	0	junction_10	193.647731169209	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACGTGCAATGTTGGG	NA	False	NA	-11	True	AATAAA	-18	NA	95763084	95670593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95738210_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755166_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.14	chr3	-	4585	11	Fusion	ENSMUSG00000028106.14_ENSMUSG00000015748.14	novel	7756	11	NA	NA	201	-2941	multi-exon	FALSE	canonical	0	0	junction_9	113.513919851268	485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACGTGCAATGTTGGG	NA	False	NA	-11	True	AATAAA	-18	NA	95739919	95670593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95738210_95738278_95739872
ES.22110.15	chr3	-	1258	8	NNC	ENSMUSG00000028106.14	novel	3298	9	NA	NA	-9617	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.556943966523	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATAGCAGAGTTTGTC	8309	False	NA	NA	False	AATAAA	-21	NA	95693709	95677872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95677952_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631
ES.22110.16	chr3	-	3929	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-614	-17	-529	17	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGCATTTTCTTG	9998	False	NA	13	True	ATTAAA	-32	NA	95726704	95679549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.17	chr3	-	3856	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-770	11902	-539	12	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTGAGTATTGCATTT	9988	False	NA	8	True	ATTAAA	-27	NA	95726714	95679554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.18	chr3	-	1880	7	NIC	ENSMUSG00000028106.14	novel	3298	9	NA	NA	-9617	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	40.1234207027378	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGTCATGAATTGAGT	8309	False	NA	-1	True	ATTAAA	-18	NA	95693709	95679563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95680466_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631
ES.22110.19	chr3	-	3094	7	NIC	ENSMUSG00000028106.14	novel	3298	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	1	junction_6	40.3429740544194	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAAAGTGTCATGAATT	10005	False	NA	-5	True	ATTAAA	-14	NA	95726095	95679567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95725858
ES.22110.2	chr3	-	3028	12	Fusion	ENSMUSG00000028106.14_ENSMUSG00000028107.15	novel	7756	11	NA	NA	-8	1128	multi-exon	FALSE	canonical	0	0	junction_1	39.8766693735896	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACAAGGGATAGTCACT	9958	False	NA	NA	False	AATAAA	-20	NA	95726078	95666524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_95667503_95673312_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.20	chr3	-	3435	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-735	12288	-504	-374	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTTTACCTTTTTACT	9944	False	NA	NA	False	AAGAAA	-19	NA	95726679	95679940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.21	chr3	-	3441	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-587	444	-502	371	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATTTGTAAAACATC	9946	False	NA	NA	False	ATTAAA	-25	NA	95726677	95680010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.22	chr3	-	1507	6	ISM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	31444	3521	-10554	-2706	internal_fragment	FALSE	canonical	3	54	junction_4	25.0247877113873	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATACTTTGTCTTCT	7372	False	NA	NA	False	NA	NA	NA	95694646	95683087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595
ES.22110.23	chr3	-	2233	8	ISM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	-590	3797	-505	-2982	5prime_fragment	FALSE	canonical	3	54	junction_4	24.8809409888331	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAAGCTGTCATTTA	9943	False	NA	NA	False	AATAAA	-3	NA	95726680	95683363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.24	chr3	-	1536	7	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-143	15737	3	-3008	5prime_fragment	FALSE	canonical	3	55	junction_4	21.7460085737335	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATTAATTTAAA	10013	False	NA	NA	False	NA	NA	NA	95726087	95683389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.25	chr3	-	1570	6	FSM	ENSMUSG00000028106.14	ENSMUST00000198741.2	1052	6	-518	0	-518	0	multi-exon	FALSE	canonical	3	54	junction_2	29.2574776766556	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTTTTGTTTTTTGT	10009	False	NA	NA	False	AATAAA	-21	NA	95726693	95691279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.26	chr3	-	2015	1	Intergenic	novelGene_18253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAGAGAATTT	3801	False	NA	NA	False	NA	NA	NA	95706896	95704881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95704900_95706900
ES.22110.27	chr3	-	168	1	Intergenic	novelGene_18254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAGAGAGAGGC	5506	False	NA	NA	False	NA	NA	NA	95705191	95705023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95705000_95705200
ES.22110.28	chr3	-	100	1	Intergenic	novelGene_18257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	10000	False	NA	NA	False	NA	NA	NA	95726702	95726602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95726600_95726700
ES.22110.29	chr3	-	3151	17	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	8	125	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	164.472452100648	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAGATAGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	95763189	95737310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755166_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.3	chr3	-	3478	1	Genic_Genomic	ENSMUSG00000028107.15_ENSMUSG00000028106.14	novel	NA	NA	NA	NA	-3145	467	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTCCCCTCTCACAT	3480	False	NA	NA	False	AATAAA	-25	NA	95670663	95667185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_95667200_95670700
ES.22110.30	chr3	-	2892	15	ISM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	2246	-94	-7	94	3prime_fragment	FALSE	canonical	3	400	junction_5	22.8674084090642	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	932	False	NA	NA	False	NA	NA	NA	95760951	95737341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755
ES.22110.31	chr3	-	4246	16	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	7	94	intron_retention	FALSE	canonical	3	19	junction_12	138.630379867554	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95763190	95737341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.32	chr3	-	2446	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	-3	490	-3	4	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATATTTTTCATATGGT	NA	False	NA	-30	True	ATTAAA	-20	NA	95763200	95737925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.33	chr3	-	2457	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.481030499468	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTATGATATTTTTCATA	NA	False	NA	-34	True	ATTAAA	-16	NA	95763164	95737929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741566_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.34	chr3	-	2707	17	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	185.00945921763	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTATGATATTTTTCATA	NA	False	NA	-34	True	ATTAAA	-16	NA	95763090	95737929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95740565_95740669_95741064_95741149_95741395_95741515_95742665_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.36	chr3	-	2530	17	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	136.057834669673	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763196	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.37	chr3	-	4759	4	NIC	ENSMUSG00000015748.14	novel	2732	16	NA	NA	3410	0	intron_retention	FALSE	canonical	3	424	junction_3	14.4299072146089	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	5795	False	NA	-38	True	ATTAAA	-12	NA	95749069	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95743056_95743725_95743870_95747981
ES.22110.38	chr3	-	4504	16	NIC	ENSMUSG00000015748.14	novel	2732	16	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_8	168.82869687612	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763064	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748057_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755
ES.22110.39	chr3	-	3071	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7	junction_2	140.764894613521	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763094	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741054_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.4	chr3	-	8227	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-733	4	-502	-4	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	9946	False	NA	1	True	AATAAA	-16	NA	95726677	95667656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.40	chr3	-	2573	17	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.738930923589	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763188	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741566_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.42	chr3	-	2414	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	152.241912757296	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763184	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741513_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760944_95763060
ES.22110.44	chr3	-	2729	16	FSM	ENSMUSG00000015748.14	ENSMUST00000161476.8	2732	16	3	0	3	0	multi-exon	FALSE	canonical	1	3	junction_15	112.760197863529	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763062	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95762631
ES.22110.45	chr3	-	2429	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	112.950057793502	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763197	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741401_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.46	chr3	-	2208	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	113.222180787257	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763077	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754793_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.47	chr3	-	3546	15	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_11	156.495305400018	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763094	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95742838_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755166_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.48	chr3	-	2428	16	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	110.616856260196	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763180	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741054_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ES.22110.49	chr3	-	2427	16	NNC	ENSMUSG00000015748.14	novel	2732	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	113.494121237867	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763186	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760944_95763051
ES.22110.5	chr3	-	7643	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-510	-674	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATAGTGTGTCTTAGCA	9938	False	NA	-1	True	AATAAA	-28	NA	95726685	95668326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.50	chr3	-	2565	17	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	165.496223521868	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763173	95737933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742838_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.54	chr3	-	1768	4	NIC	ENSMUSG00000015748.14	novel	2548	13	NA	NA	282	-1	intron_retention	FALSE	canonical	3	427	junction_1	19.6015872373189	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTAGTATGATATTTT	NA	False	NA	-39	True	ATTAAA	-11	NA	95742695	95737934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95738278_95739872_95741149_95741395_95741515_95742665
ES.22110.56	chr3	-	4991	14	NNC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_9	175.645352744752	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTAGTATGATATTTT	NA	False	NA	-39	True	ATTAAA	-11	NA	95763196	95737934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95738278_95739872_95741149_95741395_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755166_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
ES.22110.57	chr3	-	177	1	Intergenic	novelGene_18261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGTAAAAA	2585	False	NA	NA	False	NA	NA	NA	95759298	95759121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95759100_95759300
ES.22110.6	chr3	-	6938	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-125	685	1	-685	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGCACAACATAGT	9967	False	NA	-12	True	AATAAA	-17	NA	95726069	95668337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22110.7	chr3	-	6924	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	1	-777	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCTGTGTCTGTGA	9967	False	NA	-104	True	CATAAA	-17	NA	95726069	95668429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.8	chr3	-	6591	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	-2	-1133	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGACTATTTGATTTT	10008	False	NA	NA	False	AATATA	-19	NA	95726092	95668785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ES.22110.9	chr3	-	5969	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-326	1855	-95	-1855	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATCCCTAAGGGGAAGA	9917	False	NA	NA	False	ATTAAA	-22	NA	95726270	95669507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ES.22111.1	chr3	+	172	1	Intergenic	novelGene_18262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTACTGCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	95765808	95765980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95765800_95766000
ES.22112.1	chr3	-	2635	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	6	-2153	6	2153	multi-exon	FALSE	canonical	3	716	junction_2	92.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGTTTTTATTCATT	NA	False	NA	NA	False	GATAAA	-42	NA	95778825	95767792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95770245_95777805_95777928_95778764
ES.22112.2	chr3	-	2000	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	19	-1531	19	1531	multi-exon	FALSE	canonical	3	716	junction_2	92.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAAACTAGACTCAAA	NA	False	NA	NA	False	AATGAA	-13	NA	95778812	95768414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95770245_95777805_95777928_95778764
ES.22112.3	chr3	-	197	1	Intergenic	novelGene_18263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAAAAAAATGGAATAG	NA	False	NA	NA	False	AAGAAA	-6	NA	95769881	95769684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95769700_95769900
ES.22112.4	chr3	-	608	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	-50	-70	-50	70	multi-exon	FALSE	canonical	3	716	junction_2	92.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTCAGCGGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95778881	95769875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95770245_95777805_95777928_95778764
ES.22112.5	chr3	-	458	3	NIC	ENSMUSG00000054312.7	novel	488	3	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	443	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAGGCTTGGACATA	NA	False	NA	NA	False	AATAAA	-17	NA	95778794	95769965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95770245_95777805_95777955_95778764
ES.22113.1	chr3	+	3285	1	NIC	ENSMUSG00000080727.3	novel	1330	2	NA	NA	76	1	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGACTTATTGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	95778918	95782203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95778900_95782200
ES.22113.2	chr3	+	210	1	Intergenic	novelGene_18264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGCTCATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	95781323	95781533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95781300_95781500
ES.22114.1	chr3	-	183	1	Intergenic	novelGene_18265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAGGCATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	95783998	95783815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_95783800_95784000
ES.22115.1	chr3	+	179	1	Intergenic	novelGene_18266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95785610	95785789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95785600_95785800
ES.22116.1	chr3	-	3559	2	ISM	ENSMUSG00000038550.11	ENSMUST00000159863.2	372	5	31	-1952	31	3	intron_retention	FALSE	canonical	3	167	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-18	NA	95789484	95785811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95787833_95787946
ES.22116.10	chr3	-	2216	4	ISM	ENSMUSG00000038550.11	ENSMUST00000159863.2	372	5	-29	-940	-1	-2	intron_retention	FALSE	canonical	3	167	junction_1	16.9901932498329	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTGTGGTTTATGA	NA	False	NA	NA	False	NA	NA	NA	95789544	95786823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95787833_95787946_95788026_95788294_95788371_95788492
ES.22116.11	chr3	-	2299	3	ISM	ENSMUSG00000038550.11	ENSMUST00000161866.8	710	5	48	718	0	-12	intron_retention	FALSE	canonical	3	167	junction_1	18.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTCTGGCTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	95789515	95786833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_95787833_95787946_95788026_95788294
ES.22116.2	chr3	-	3752	1	Genic_Genomic	ENSMUSG00000038550.11	novel	NA	NA	NA	NA	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTTTTTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-18	NA	95789563	95785811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_95785800_95789600
ES.22116.3	chr3	-	1482	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	-82	-2	-62	0	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789625	95785814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
ES.22116.4	chr3	-	1064	6	NIC	ENSMUSG00000038550.11	novel	1939	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	70.7615714918769	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789517	95785814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788592_95789466
ES.22116.5	chr3	-	1499	7	NNC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	74.0954714465661	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789544	95785814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266_95789365_95789466
ES.22116.6	chr3	-	2855	5	NIC	ENSMUSG00000038550.11	novel	1939	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	53	junction_4	56.9270366346256	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789539	95785814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789266
ES.22116.9	chr3	-	1092	6	NNC	ENSMUSG00000038550.11	novel	1398	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	88.799549548407	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789548	95785816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95789266_95789365_95789466
ES.22117.1	chr3	-	3016	2	NNC	ENSMUSG00000038543.14	novel	551	4	NA	NA	3924	-15	intron_retention	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	95795318	95791284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95792858_95793875
ES.22117.2	chr3	-	736	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	52	21	2	-17	multi-exon	FALSE	canonical	3	27	junction_2	2.22710574513201	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAATTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	95799265	95791286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ES.22117.3	chr3	-	986	6	NNC	ENSMUSG00000038543.14	novel	809	6	NA	NA	-309	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	11.3595774569303	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAATTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	95799626	95791287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799306
ES.22117.4	chr3	-	547	4	FSM	ENSMUSG00000038543.14	ENSMUST00000145949.8	551	4	-2	6	2	-6	multi-exon	FALSE	canonical	3	30	junction_1	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGCGAGGGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	95799265	95795276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95795609_95796168_95796228_95797034_95797122_95799196
ES.22118.1	chr3	+	1774	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	-149	-24	-63	24	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	4	True	AATAAA	-19	NA	95801217	95804781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ES.22118.10	chr3	+	1549	6	NNC	ENSMUSG00000015750.16	novel	1601	7	NA	NA	20	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	140.491423225761	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGGGGGACTTGGCT	NA	False	NA	-3	True	AATAAA	-12	NA	95801300	95804774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95801596_95802132_95802304_95802454_95802529_95803041_95803158_95803548_95803673_95804005
ES.22118.11	chr3	+	3077	2	NIC	ENSMUSG00000015750.16	novel	2679	4	NA	NA	24	15	intron_retention	FALSE	canonical	3	325	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGGGGGGACTTGG	NA	False	NA	-5	True	AATAAA	-10	NA	95801304	95804772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95803158_95803548
ES.22118.12	chr3	+	3876	5	NIC	ENSMUSG00000015750.16	novel	2863	6	NA	NA	24	500	intron_retention	FALSE	canonical	3	313	junction_3	16.8374582404827	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATCTCACCTAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	95801304	95806100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.13	chr3	+	2643	4	NIC	ENSMUSG00000015750.16	novel	2863	6	NA	NA	-8	17	intron_retention	FALSE	canonical	3	325	junction_3	13.490737563232	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGGGGGACTTGGCT	NA	False	NA	-3	True	AATAAA	-12	NA	95801358	95804774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95802304_95802454_95802529_95802759_95803158_95803548
ES.22118.14	chr3	+	3538	1	Genic_Genomic	ENSMUSG00000015750.16	novel	NA	NA	NA	NA	587	301	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCTGAGAATGCTT	NA	False	NA	NA	False	NA	NA	NA	95802363	95805901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_95802400_95805900
ES.22118.2	chr3	+	2100	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-52	815	-52	28	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGCTTTAAGAGGGGT	NA	False	NA	8	True	AATAAA	-23	NA	95801228	95804785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.4	chr3	+	3206	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-41	-302	-41	302	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCTGAGAATGCTTT	NA	False	NA	NA	False	NA	NA	NA	95801239	95805902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.5	chr3	+	3400	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-41	-496	-41	496	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAGGATCTCACCTAA	NA	False	NA	NA	False	AATAAA	-14	NA	95801239	95806096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.6	chr3	+	2999	3	NIC	ENSMUSG00000015750.16	novel	2679	4	NA	NA	-41	23	intron_retention	FALSE	canonical	3	325	junction_2	7.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGACTTGGCTTTAAGA	NA	False	NA	3	True	AATAAA	-18	NA	95801239	95804780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95802304_95802454_95803158_95803548
ES.22118.7	chr3	+	2906	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-19	-24	-19	24	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATAGTCATGACCTTAA	NA	False	NA	NA	False	AATACA	-28	NA	95801261	95805624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.8	chr3	+	1873	5	NNC	ENSMUSG00000015750.16	novel	2863	6	NA	NA	-4	24	intron_retention	FALSE	canonical	0	0	junction_1	144.701416717322	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGGCTTTAAGAG	NA	False	NA	4	True	AATAAA	-19	NA	95801276	95804781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95801596_95802458_95802529_95802759_95802883_95803029_95803158_95803548
ES.22118.9	chr3	+	2369	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	-2	496	-2	-40	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATATATTGAGCAAAAA	NA	False	NA	NA	False	AAAACA	-34	NA	95801278	95805104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ES.22119.1	chr3	+	175	1	Intergenic	novelGene_18267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAACAAAAAG	1985	False	NA	NA	False	NA	NA	NA	95821305	95821480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95821300_95821500
ES.2212.2	chr1	+	5325	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-78	-3	-78	3	multi-exon	FALSE	canonical	3	88	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTGCATGTGGCC	NA	False	NA	30	True	AATAAA	-17	NA	191638800	191645362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191639726_191640962
ES.2212.3	chr1	+	2169	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-69	3144	-69	930	multi-exon	FALSE	canonical	3	88	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTCTGCTTTTCTTCC	NA	False	NA	2	True	AATAAA	-12	NA	191638809	191642215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_191639726_191640962
ES.2212.4	chr1	+	5123	3	NNC	ENSMUSG00000037434.8	novel	5244	2	NA	NA	16	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTACTGTGTTTCTTCT	NA	False	NA	15	True	TATAAA	-16	NA	191638894	191645296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191639726_191640962_191644493_191644534
ES.22120.1	chr3	+	203	1	Intergenic	novelGene_18268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATTGTAATCAAATC	NA	False	NA	NA	False	NA	NA	NA	95832227	95832430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95832200_95832400
ES.22121.1	chr3	+	3295	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	-18	-3	-18	3	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGTGTGTGATTGTTC	NA	False	NA	108	True	AATAAA	-25	NA	95836539	95854705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.11	chr3	+	1777	6	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	660.715672585417	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836585	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845288_95853833
ES.22121.12	chr3	+	2924	1	NIC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	1	-4959	mono-exon	FALSE	NA	NA	NA	NA	NA	937	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTCTGAGCCAGAGAG	NA	False	NA	NA	False	NA	NA	NA	95836590	95839514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95836600_95839500
ES.22121.13	chr3	+	3012	6	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	660.715672585417	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836590	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845257_95852562
ES.22121.14	chr3	+	1341	7	NNC	ENSMUSG00000015749.13	novel	1381	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	613.76526910176	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGTGTAGTTTGGTGC	NA	False	NA	12	True	ATTAAA	-15	NA	95836590	95852877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845277_95851618_95851674_95852491
ES.22121.15	chr3	+	3177	6	NIC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	2	33	junction_5	647.642370448383	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGACTAGCTTCAGTGT	NA	False	NA	98	True	AATAAA	-15	NA	95836592	95854695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95852491
ES.22121.16	chr3	+	3126	6	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	660.715672585417	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836597	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845309_95852493
ES.22121.19	chr3	+	3130	6	NIC	ENSMUSG00000015749.13	novel	1381	7	NA	NA	8	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	660.715672585417	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836602	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95852491
ES.22121.2	chr3	+	1531	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	0	1743	0	12	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCAGTAGTCTTTTGA	NA	False	NA	94	True	TATAAA	-29	NA	95836557	95852959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.25	chr3	+	6193	6	ISM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	47	-2148	10	2148	intron_retention	FALSE	canonical	3	1451	junction_5	116.900641572234	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTTAAAAGTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	95836604	95856850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618
ES.22121.27	chr3	+	2233	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	51	990	14	765	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATCTTGAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	95836608	95853712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.28	chr3	+	3165	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	605.465293986552	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCTTCAGTGTGTGATT	NA	False	NA	104	True	AATAAA	-21	NA	95836617	95854701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852539
ES.22121.29	chr3	+	2504	2	NNC	ENSMUSG00000015749.13	novel	637	4	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836620	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836943_95852512
ES.22121.3	chr3	+	4465	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	613.76526910176	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836557	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95846136_95851203_95851674_95852491
ES.22121.31	chr3	+	3056	6	FSM	ENSMUSG00000015749.13	ENSMUST00000168106.8	2890	6	-47	-119	14	-2	multi-exon	FALSE	canonical	0	0	junction_2	657.373987924682	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGCTTCAGTGTGTGAT	NA	False	NA	103	True	AATAAA	-20	NA	95836650	95854700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.32	chr3	+	976	5	NNC	ENSMUSG00000015749.13	novel	2890	6	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	698.361788401971	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGGTGTAGTTTGGT	NA	False	NA	10	True	ATTAAA	-13	NA	95836662	95852875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95844428_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.35	chr3	+	2673	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	109	-1401	1	-303	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAATCTATATATT	NA	False	NA	NA	False	AATAAA	-12	NA	95836698	95854278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ES.22121.37	chr3	+	3790	7	NIC	ENSMUSG00000015749.13	novel	495	4	NA	NA	116	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	598.881735681873	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCTTCAGTGTGTGATT	NA	False	NA	104	True	AATAAA	-21	NA	95837009	95854701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95837932_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.38	chr3	+	1745	7	NIC	ENSMUSG00000015749.13	novel	495	4	NA	NA	347	10	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	598.881735681873	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTGCATTTCATTCA	NA	False	NA	22	True	ATTAAA	-25	NA	95837240	95852887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_95837932_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.4	chr3	+	2900	5	NNC	ENSMUSG00000015749.13	novel	2890	6	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	698.361788401971	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCTTCAGTGTGTGA	NA	False	NA	102	True	AATAAA	-19	NA	95836562	95854699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836963_95844428_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.40	chr3	+	176	1	Intergenic	novelGene_18269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	950	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	95842945	95843121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95842900_95843100
ES.22121.5	chr3	+	2853	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	10	411	10	-290	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGACTTTTTATCAA	NA	False	NA	NA	False	AATAAA	-25	NA	95836567	95854291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.6	chr3	+	1427	7	NNC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	604.017567809267	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGGTGTAGTTTGGTG	NA	False	NA	11	True	ATTAAA	-14	NA	95836570	95852876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836968_95841233_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ES.22121.7	chr3	+	956	2	NNC	ENSMUSG00000015749.13	novel	915	4	NA	NA	13	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACTAGCTTCAGTG	NA	False	NA	97	True	AATAAA	-14	NA	95836570	95854694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_95836672_95853839
ES.22121.8	chr3	+	1402	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	-19	-2	13	2	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTAGTTTGGTGCAT	NA	False	NA	14	True	ATTAAA	-17	NA	95836570	95852879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ES.22121.9	chr3	+	3225	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	-18	-1826	14	1	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTCAGTGTGTGATTGT	NA	False	NA	106	True	AATAAA	-23	NA	95836571	95854703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ES.22122.1	chr3	-	3419	1	Antisense	novelGene_ENSMUSG00000015749.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAACTGCCCACTAGCA	1399	False	NA	NA	False	NA	NA	NA	95854475	95851056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_95851100_95854500
ES.22123.1	chr3	+	167	1	Intergenic	novelGene_18270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	95861088	95861255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95861100_95861300
ES.22124.1	chr3	+	3250	1	Intergenic	novelGene_18271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGACAGGGCCAGATG	9387	False	NA	NA	False	NA	NA	NA	95903409	95906659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95903400_95906700
ES.22125.1	chr3	-	3070	1	NIC	ENSMUSG00000015745.10	novel	1931	6	NA	NA	3771	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTCATTGCTTTTGCT	5495	False	NA	NA	False	GATAAA	-37	NA	95899209	95896139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95896100_95899200
ES.22125.2	chr3	-	1847	6	NIC	ENSMUSG00000015745.10	novel	1931	6	NA	NA	-339	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	4.45421149026402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTCATTGCTTTTGCT	1052	False	NA	NA	False	GATAAA	-37	NA	95903652	95896139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833_95902957_95903082
ES.22125.3	chr3	-	1880	6	FSM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	-362	413	-362	-23	multi-exon	FALSE	canonical	3	9	junction_2	1.49666295470958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATCAAAT	1029	False	NA	NA	False	GATAAA	-23	NA	95903675	95896153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833_95902981_95903082
ES.22126.1	chr3	-	2038	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	604	-5	-32	5	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTTTGATGGGCTCT	NA	False	NA	0	True	AATAAA	-31	NA	95965174	95907138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ES.22127.1	chr3	+	197	1	Intergenic	novelGene_18272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	95970833	95971030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95970800_95971000
ES.22128.1	chr3	+	178	1	Intergenic	novelGene_18273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGAGTGTG	2061	False	NA	NA	False	NA	NA	NA	95984873	95985051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_95984900_95985100
ES.22129.1	chr3	+	2940	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-86	3455	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.8562534049952	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCTCATCAGGACC	NA	False	NA	NA	False	AAGAAA	-10	NA	96011752	96063335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96011941_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.10	chr3	+	3882	12	NIC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-13	-3983	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.6325587201114	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTTTGTAAGAAAAATTA	NA	False	NA	NA	False	AATAAA	-3	NA	96011825	96064463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.11	chr3	+	5758	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	-12	2297	-12	-2297	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCATGTTGTTTTTATT	NA	False	NA	11	True	TATAAA	-31	NA	96011826	96066149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.12	chr3	+	5811	13	FSM	ENSMUSG00000038495.15	ENSMUST00000090785.9	8101	13	-9	2299	-9	-2299	multi-exon	FALSE	canonical	1	4	junction_1	24.0050631233404	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCATGTTGTTTTTA	NA	False	NA	9	True	TATAAA	-29	NA	96011829	96066147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.13	chr3	+	3580	11	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-8	-3996	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.7434104033124	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAAAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	96011830	96064450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059829_96059945_96060724_96060810_96062085
ES.22129.14	chr3	+	3998	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-3966	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.8562534049952	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011839	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96011941_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.15	chr3	+	5525	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-2305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0778748282055	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTGTATCATGTTG	NA	False	NA	3	True	TATAAA	-23	NA	96011839	96066141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96011941_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.16	chr3	+	8017	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTTGTATTTCATTTC	NA	False	NA	8	True	AATAAA	-18	NA	96011839	96068442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.17	chr3	+	3314	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	2	3915	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	25.2898475457819	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTATGTGCTTGGCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	96011840	96063795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.18	chr3	+	2789	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	7	3453	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCTGGCTCATCAGGA	NA	False	NA	NA	False	AAGAAA	-8	NA	96011845	96063333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.19	chr3	+	5603	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	7	-2299	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCATGTTGTTTTTA	NA	False	NA	9	True	TATAAA	-29	NA	96011845	96066147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.2	chr3	+	5938	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-77	-2295	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTGTTTTTATTTA	NA	False	NA	13	True	TATAAA	-33	NA	96011761	96066151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.20	chr3	+	3743	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	9	-3966	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.5084006356194	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011847	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.21	chr3	+	7700	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.5084006356194	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTATTTTGTATTTCA	NA	False	NA	4	True	AATAAA	-14	NA	96011848	96068438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.22	chr3	+	5471	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-9	-2295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9265790261654	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTGTTTTTATTTA	NA	False	NA	13	True	TATAAA	-33	NA	96011848	96066151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96011941_96016022_96016081_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.23	chr3	+	3802	4	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-3	-2299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.88561808316413	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCATGTTGTTTTTA	NA	False	NA	9	True	TATAAA	-29	NA	96011854	96066147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96016022_96016081_96043784_96043947_96062842
ES.22129.24	chr3	+	3231	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	0	3907	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCAGTAATGTATGTGC	NA	False	NA	NA	False	AATAAA	-16	NA	96011857	96063787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.26	chr3	+	4036	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-3966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011858	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.27	chr3	+	5707	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-2295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTGTTTTTATTTA	NA	False	NA	13	True	TATAAA	-33	NA	96011858	96066151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.28	chr3	+	5918	14	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	1	-2305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.384382283312	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTGTATCATGTTG	NA	False	NA	3	True	TATAAA	-23	NA	96011858	96066141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96037541_96037655_96038887_96038975_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.29	chr3	+	6608	13	FSM	ENSMUSG00000038495.15	ENSMUST00000090785.9	8101	13	20	1473	1	-1473	multi-exon	FALSE	canonical	1	4	junction_1	24.0050631233404	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAATTGAAAAAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	96011858	96066973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.3	chr3	+	4141	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	-64	3966	-64	-3966	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011774	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.30	chr3	+	3361	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	21	4661	0	3905	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGCAGTAATGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	96011859	96063785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.32	chr3	+	7863	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.155957054448	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTATTTTGTATTTCA	NA	False	NA	4	True	AATAAA	-14	NA	96011873	96068438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049024_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.33	chr3	+	4317	14	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	16	-3974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.2347557826162	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTATTTTTGATA	NA	False	NA	NA	False	AATAAA	-12	NA	96011875	96064472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96037541_96037655_96038802_96038975_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.34	chr3	+	3458	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	16	3905	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGCAGTAATGTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	96011875	96063785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.36	chr3	+	3763	12	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	173	-3966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.8959375451216	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96012032	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96016022_96016081_96043784_96043947_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.37	chr3	+	3567	1	Intergenic	novelGene_18274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	96039575	96043142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96039600_96043100
ES.22129.38	chr3	+	3615	6	ISM	ENSMUSG00000038495.15	ENSMUST00000098849.3	8046	14	43151	3966	-471	-3966	3prime_fragment	FALSE	canonical	3	56	junction_1	7.00285656000464	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96057549	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.39	chr3	+	2717	4	ISM	ENSMUSG00000038495.15	ENSMUST00000098849.3	8046	14	44811	3996	1189	-3996	3prime_fragment	FALSE	canonical	3	60	junction_3	5.90668171555645	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAAAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	96059209	96064450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.4	chr3	+	3970	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-27	-3966	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011811	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.5	chr3	+	4028	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-27	-3966	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	25.2898475457819	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011811	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.7	chr3	+	8065	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	-22	0	-22	0	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCATTTCCTGT	NA	False	NA	12	True	AATAAA	-22	NA	96011816	96068446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.8	chr3	+	4210	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	-20	-3966	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011818	96064480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.22129.9	chr3	+	7859	12	NIC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.6325587201114	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTTGTATTTCATT	NA	False	NA	6	True	AATAAA	-16	NA	96011825	96068440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ES.2213.1	chr1	-	2940	1	ISM	ENSMUSG00000055833.15	ENSMUST00000139827.8	4354	5	10499	9	2109	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGATGAGGGATGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	191629132	191626192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191626200_191629100
ES.2213.2	chr1	-	3977	5	NNC	ENSMUSG00000055833.15	novel	4354	5	NA	NA	-60	-1673	intron_retention	FALSE	canonical	0	0	junction_1	1	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTTTGTTCTCTCGGT	NA	False	NA	NA	False	AATAAA	-18	NA	191639699	191627856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191630939_191632791_191633031_191635228_191635313_191635653_191635698_191639171
ES.2213.3	chr1	-	1017	3	NNC	ENSMUSG00000055833.15	novel	4354	5	NA	NA	-72	-2798	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTTCCGTAGTCT	NA	False	NA	NA	False	NA	NA	NA	191639711	191634879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191635313_191635653_191635698_191639171
ES.2213.4	chr1	-	4817	1	Genic_Genomic	ENSMUSG00000055833.15	novel	NA	NA	NA	NA	-59	-2800	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTGTCTTCCGTAGT	NA	False	NA	NA	False	NA	NA	NA	191639698	191634881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_191634900_191639700
ES.2213.5	chr1	-	3362	1	Genic_Genomic	ENSMUSG00000055833.15	novel	NA	NA	NA	NA	-75	-4271	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCAAGAAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	191639714	191636352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_191636400_191639700
ES.22130.1	chr3	+	2774	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	1	3	1	-2	multi-exon	FALSE	canonical	2	2	junction_4	1.93245310421754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCTGGTATTTTCTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	96069321	96079031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ES.22130.2	chr3	+	2668	17	NIC	ENSMUSG00000045934.16	novel	2778	17	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	2.24913177693082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGTATTTTCTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	96069372	96079033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078458
ES.22131.1	chr3	+	1586	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	170	159	-45	-159	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAGGAGGAGTCTGG	NA	False	NA	36	True	AATAAA	-32	NA	96079817	96084721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.10	chr3	+	4306	2	Fusion	ENSMUSG00000068856.4_ENSMUSG00000084686.3	novel	437	2	NA	NA	0	-177	intron_retention	FALSE	canonical	0	0	junction_1	0	485	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGTGAAGTAA	NA	False	NA	18	True	AATAAA	-14	NA	96079862	96084703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_96080322_96080856
ES.22131.11	chr3	+	1512	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	5	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	678.117393966561	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCTGGTGAAGTAACT	NA	False	NA	20	True	AATAAA	-16	NA	96079867	96084705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96079924_96080286_96080408_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.12	chr3	+	1621	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	177	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	700.091822549014	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTGAAGTAACTTTTA	NA	False	NA	24	True	AATAAA	-20	NA	96080039	96084709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96080193_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.2	chr3	+	1995	5	NIC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	-28	-174	intron_retention	FALSE	canonical	3	1297	junction_2	212.256330883204	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGGTGAAGTAACTT	NA	False	NA	21	True	AATAAA	-17	NA	96079834	96084706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96079924_96080286_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.3	chr3	+	1546	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	-23	-159	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	681.366450597621	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAGGAGGAGTCTGG	NA	False	NA	36	True	AATAAA	-32	NA	96079839	96084721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081828_96083950_96084125_96084294
ES.22131.4	chr3	+	1735	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	193	-13	-22	13	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGGGTATCCATTGTAG	NA	False	NA	NA	False	AATAAA	-34	NA	96079840	96084893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.5	chr3	+	2123	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	193	-401	-22	401	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCCATTTTATT	NA	False	NA	9	True	ATTAAA	-11	NA	96079840	96085281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22131.6	chr3	+	1503	5	NIC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	-19	327	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	758.153142511459	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTATGTTTGCTT	NA	False	NA	-65	True	NA	NA	NA	96079843	96085207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96079924_96080286_96080416_96081638_96081846_96083950_96084125_96084294
ES.22131.7	chr3	+	1525	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	-10	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	692.828579087208	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCTGGTGAAGTAACTT	NA	False	NA	21	True	AATAAA	-17	NA	96079852	96084706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083961_96084125_96084294
ES.22131.9	chr3	+	1436	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	0	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	678.117393966561	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGAAGTAACTTTTAG	NA	False	NA	25	True	AATAAA	-21	NA	96079862	96084710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96079924_96080286_96080322_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ES.22132.1	chr3	-	160	1	Intergenic	novelGene_18275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	96083159	96082999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96083000_96083200
ES.22133.1	chr3	+	4323	13	FSM	ENSMUSG00000038486.10	ENSMUST00000035371.9	4334	13	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_2	2.01900690659762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTCTGCTCCTGG	1765	False	NA	4	True	AATAAA	-25	NA	96088477	96102837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96088620_96091954_96092924_96094288_96094470_96095411_96095564_96095640_96095775_96096377_96096468_96096682_96096794_96096966_96097056_96097598_96097764_96097942_96098077_96099729_96099937_96100504_96100665_96101048
ES.22133.2	chr3	+	5274	11	ISM	ENSMUSG00000038486.10	ENSMUST00000035371.9	4334	13	12	0	12	0	intron_retention	FALSE	canonical	0	0	junction_2	1.98997487421324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTCTGCTCCTGG	1766	False	NA	4	True	AATAAA	-25	NA	96088478	96102837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96088620_96091954_96092924_96094288_96094470_96095411_96095564_96095640_96095775_96096377_96096468_96096682_96096794_96096966_96097056_96097598_96097764_96097942_96098077_96099729
ES.22134.1	chr3	-	1024	1	Genic_Genomic	ENSMUSG00000015943.12	novel	NA	NA	NA	NA	-23	2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTGCTCTTAATACCT	NA	False	NA	NA	False	AATAAA	-23	NA	96104925	96103901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_96103900_96104900
ES.22134.2	chr3	-	605	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	-81	205	-81	70	multi-exon	FALSE	canonical	3	441	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTGATTTGTACGGAC	NA	False	NA	0	True	AATAAA	-22	NA	96104983	96104108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96104596_96104865
ES.22134.3	chr3	-	807	1	NIC	ENSMUSG00000015943.12	novel	995	4	NA	NA	-20	63	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	-7	True	AATAAA	-15	NA	96104922	96104115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96104100_96104900
ES.22134.4	chr3	-	529	2	NNC	ENSMUSG00000015943.12	novel	729	2	NA	NA	75	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTTATTCCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	96105730	96104116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96104596_96105680
ES.22135.1	chr3	+	176	1	Intergenic	novelGene_18276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAAGGTGTGTGTGTG	9805	False	NA	NA	False	NA	NA	NA	96118405	96118581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96118400_96118600
ES.22136.1	chr3	-	711	1	FSM	ENSMUSG00000068855.4	ENSMUST00000090782.4	520	1	-12	-179	-12	179	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGCTAGTTGCAGATG	NA	False	NA	NA	False	NA	NA	NA	96128208	96127497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96127500_96128200
ES.22137.1	chr3	+	2101	1	FSM	ENSMUSG00000093577.2	ENSMUST00000176760.2	2427	1	331	-5	331	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTCTATTTCTTTGT	NA	False	NA	NA	False	TATAAA	-15	NA	96147039	96149140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96147000_96149100
ES.22138.1	chr3	+	501	1	FSM	ENSMUSG00000093769.5	ENSMUST00000176059.2	1820	1	160	1159	160	-1159	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTCCCGGAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	96154160	96154661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96154200_96154700
ES.22138.2	chr3	+	1663	1	FSM	ENSMUSG00000093769.5	ENSMUST00000177796.2	1825	1	161	1	161	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGGGTTTTTTATGG	NA	False	NA	NA	False	AATAAA	-17	NA	96154161	96155824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96154200_96155800
ES.22139.1	chr3	+	471	1	FSM	ENSMUSG00000074403.3	ENSMUST00000098843.3	488	1	26	-9	26	9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACGTTGTCGATGAAAG	2006	False	NA	NA	False	NA	NA	NA	96175995	96176466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96176000_96176500
ES.2214.1	chr1	+	738	3	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTTGTCTGCGTTGCT	NA	False	NA	NA	False	NA	NA	NA	191660719	191662346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191661003_191661648_191661784_191662026
ES.22140.1	chr3	-	181	1	Intergenic	novelGene_18277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAGGGAAATTAGCA	2053	False	NA	NA	False	NA	NA	NA	96196419	96196238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96196200_96196400
ES.22141.1	chr3	+	171	1	Intergenic	novelGene_18278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	2838	False	NA	NA	False	NA	NA	NA	96198270	96198441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96198300_96198400
ES.22141.2	chr3	+	177	2	Antisense	novelGene_ENSMUSG00000015947.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	118	junction_1	0	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2841	False	NA	NA	False	NA	NA	NA	96198273	96230408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_96198323_96230280
ES.22141.3	chr3	+	199	1	Intergenic	novelGene_18279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCAGGGTGTGTGTCAGA	NA	False	NA	NA	False	NA	NA	NA	96217221	96217420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96217200_96217400
ES.22141.4	chr3	+	197	1	Intergenic	novelGene_18281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATACTCTGCCAGT	9067	False	NA	NA	False	NA	NA	NA	96230228	96230425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96230200_96230400
ES.22142.1	chr3	-	6728	1	Intergenic	novelGene_18280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	96227552	96220824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96220800_96227600
ES.22143.1	chr3	+	215	1	Intergenic	novelGene_18282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATGGAATCTACCTAAC	1786	False	NA	NA	False	NA	NA	NA	96249638	96249853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96249600_96249900
ES.22144.1	chr3	+	1575	4	FSM	ENSMUSG00000097851.6	ENSMUST00000180637.2	1436	4	-138	-1	-138	1	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	9252	False	NA	NA	False	NA	NA	NA	96257104	96265797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96257295_96262722_96262789_96263587_96263703_96264593
ES.22144.2	chr3	+	145	1	Intergenic	novelGene_18283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAATTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	96261279	96261424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96261300_96261400
ES.22145.1	chr3	+	344	1	Intergenic	novelGene_18284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTAAGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	96312620	96312964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96312600_96313000
ES.22146.1	chr3	-	2872	1	FSM	ENSMUSG00000095836.4	ENSMUST00000181924.2	452	1	-1472	-948	-1472	948	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATAAATAGTTG	NA	False	NA	NA	False	NA	NA	NA	96322149	96319277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96319300_96322100
ES.22146.2	chr3	-	2232	1	FSM	ENSMUSG00000095836.4	ENSMUST00000181924.2	452	1	-1472	-308	-1472	308	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTAACTTTAAAAGGCTT	NA	False	NA	NA	False	NA	NA	NA	96322149	96319917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96319900_96322100
ES.22147.1	chr3	-	5869	1	Genic_Genomic	ENSMUSG00000046317.15	novel	NA	NA	NA	NA	13996	1346	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTAGTCTTGGAGTCC	NA	False	NA	NA	False	NA	NA	NA	96345626	96339757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_96339800_96345600
ES.22147.2	chr3	-	1318	4	NNC	ENSMUSG00000046317.15	novel	1159	5	NA	NA	-188	1344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTTAGTCTTGGAGT	305	False	NA	NA	False	NA	NA	NA	96359810	96339759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96340480_96348024_96348179_96349358_96349484_96359491
ES.22147.3	chr3	-	1329	4	NNC	ENSMUSG00000046317.15	novel	1065	4	NA	NA	-113	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGAGTCTGGGGTCT	380	False	NA	NA	False	NA	NA	NA	96359735	96340941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96341759_96348024_96348179_96349358_96349484_96359502
ES.22148.1	chr3	+	6006	2	Antisense	novelGene_ENSMUSG00000106641.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGATGTTTCTTGTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	96367814	96374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_96369141_96369560
ES.22149.1	chr3	-	3309	2	Intergenic	novelGene_18285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTCTAGATTTAATTAG	NA	False	NA	NA	False	AATAAA	-35	NA	96368262	96363639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96366782_96368095
ES.22149.2	chr3	-	195	1	Intergenic	novelGene_18286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96365475	96365280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96365300_96365500
ES.2215.1	chr1	+	1712	4	NNC	ENSMUSG00000049353.18	novel	3724	3	NA	NA	-44285	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATCACTAGGTACTG	NA	False	NA	NA	False	AATAAA	-11	NA	191665045	191718343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_191665193_191688790_191688873_191715210_191715523_191717172
ES.2215.2	chr1	+	2285	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAGACCAGATTT	NA	False	NA	NA	False	NA	NA	NA	191678255	191680540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_191678300_191680500
ES.22150.1	chr3	+	175	1	Intergenic	novelGene_18287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGATAGATAGATAGAT	1867	False	NA	NA	False	NA	NA	NA	96375887	96376062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96375900_96376100
ES.22151.1	chr3	+	153	1	Intergenic	novelGene_18288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATTAAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	96413090	96413243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96413100_96413200
ES.22152.1	chr3	-	207	1	Intergenic	novelGene_18289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAGGATAGATGGTAGAA	NA	False	NA	1	True	NA	NA	NA	96442615	96442408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96442400_96442600
ES.22153.1	chr3	+	2992	9	NNC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	-7350	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	165.040099294081	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATACTGGAGAAGTTACTA	7481	False	NA	47	True	AATAAA	-42	NA	96457922	96469201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96458119_96465305_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.10	chr3	+	2912	7	NIC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	279	junction_1	84.3860177991591	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATAAATGTTCTTTT	NA	False	NA	17	True	AATAAA	-12	NA	96465274	96469171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96465802_96466204_96466281_96466385_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.11	chr3	+	3015	6	NIC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	228	junction_1	110.779781548801	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96465275	96469173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96465802_96466207_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.12	chr3	+	2914	7	ISM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	0	0	0	intron_retention	FALSE	canonical	3	228	junction_1	95.6376262542915	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96465275	96469173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523
ES.22153.13	chr3	+	2752	8	NNC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.922999002021	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96465275	96469173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467630_96467794
ES.22153.14	chr3	+	2912	7	NIC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	0	8	intron_retention	FALSE	canonical	3	279	junction_1	83.0630617195286	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96465275	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96465802_96466204_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.16	chr3	+	2899	7	NIC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	83.1098670435707	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96465275	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467411_96467523_96467676_96467794
ES.22153.17	chr3	+	2579	6	NIC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	4	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	201.44637003431	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96465279	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96465802_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.19	chr3	+	2464	8	NNC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	365	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.726060562241	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATAAATGTTCTTTT	NA	False	NA	17	True	AATAAA	-12	NA	96465640	96469171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96465838_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.2	chr3	+	3083	9	NNC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	-4242	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	162.968363494268	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGGAGAAGTTACTAGA	NA	False	NA	49	True	AATAAA	-44	NA	96461030	96469203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96461109_96465098_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.20	chr3	+	2218	7	NNC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	-552	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	181.287678076096	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96466261	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96466281_96466385_96466534_96466648_96466746_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.21	chr3	+	2379	1	FSM	ENSMUSG00000038393.15	ENSMUST00000196871.2	694	1	-23	-1662	-10	8	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96466803	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96466800_96469200
ES.22153.22	chr3	+	2010	4	ISM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	1573	-9	22	8	3prime_fragment	FALSE	canonical	3	483	junction_1	17.4610678049451	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96466848	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.3	chr3	+	2588	9	NNC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	-4242	8	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	168.789023265733	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96461030	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96461109_96465569_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.6	chr3	+	2576	9	NNC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	-4213	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.483457775234	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96461059	96469173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96461109_96465543_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.7	chr3	+	2865	10	NNC	ENSMUSG00000038393.15	novel	2795	8	NA	NA	-4213	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.348785279011	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96461059	96469173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96461326_96462963_96463062_96465569_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.8	chr3	+	3638	7	NIC	ENSMUSG00000038393.15	novel	2827	8	NA	NA	-425	8	intron_retention	FALSE	canonical	3	413	junction_1	39.6137602355545	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	False	NA	28	True	AATAAA	-23	NA	96464847	96469182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22153.9	chr3	+	2088	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	1	738	1	580	multi-exon	FALSE	canonical	3	279	junction_1	78.2390371795021	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGCACTGTGTTCTCT	NA	False	NA	NA	False	CATAAA	-14	NA	96465273	96468461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ES.22154.1	chr3	-	669	2	ISM	ENSMUSG00000074398.6	ENSMUST00000098839.3	659	3	130	27	130	-4	3prime_fragment	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCAAAATAAAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	96465001	96463107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_96463377_96464601
ES.22155.1	chr3	+	205	1	Intergenic	novelGene_18290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAGAAAAAGA	9469	False	NA	NA	False	NA	NA	NA	96498194	96498399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96498200_96498400
ES.22155.2	chr3	+	353	1	Intergenic	novelGene_18291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCACAAACCAAAAAC	9470	False	NA	NA	False	AATAGA	-5	NA	96498195	96498548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96498200_96498500
ES.22156.1	chr3	+	2370	1	ISM	ENSMUSG00000049288.5	ENSMUST00000062058.5	3312	6	22651	2	5499	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGAATGACTTTTTTC	2502	False	NA	17	True	ATTAAA	-19	NA	96531115	96533485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96531100_96533500
ES.22157.1	chr3	-	1411	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	14	2	-8	-2	multi-exon	FALSE	canonical	3	65	junction_6	13.8534604827436	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	-2	True	NA	NA	NA	96501483	96485189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ES.22157.10	chr3	-	1749	7	NIC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	13	-3	intron_retention	FALSE	canonical	3	65	junction_5	14.7808058718807	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501462	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96485905_96487113_96487228_96487331_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ES.22157.11	chr3	-	1239	7	FSM	ENSMUSG00000028104.15	ENSMUST00000145001.2	607	7	-5	-627	-5	-3	multi-exon	FALSE	canonical	3	25	junction_6	26.9794160220137	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501480	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
ES.22157.12	chr3	-	5109	5	NIC	ENSMUSG00000028104.15	novel	607	7	NA	NA	-3687	-3	intron_retention	FALSE	canonical	3	82	junction_2	9.13783344124853	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96492680	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96485905_96487113_96487228_96487331_96487823_96488150_96488220_96488959
ES.22157.13	chr3	-	5790	2	FSM	ENSMUSG00000028104.15	ENSMUST00000141579.2	545	2	-4718	-527	-3196	-3	multi-exon	FALSE	canonical	3	95	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96492189	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96485905_96487113
ES.22157.14	chr3	-	1461	5	NIC	ENSMUSG00000028104.15	novel	607	7	NA	NA	2	-4	intron_retention	FALSE	canonical	2	4	junction_4	38.8096315365142	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACATGTCTAACAGAGTG	NA	False	NA	-4	True	NA	NA	NA	96501473	96485191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96485905_96487113_96487228_96487331_96487823_96488150_96488220_96501399
ES.22157.15	chr3	-	1504	7	NIC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	0	-5	intron_retention	FALSE	canonical	3	65	junction_5	14.8436293854749	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACATGTCTAACAGAGT	NA	False	NA	-5	True	NA	NA	NA	96501475	96485192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ES.22157.16	chr3	-	4168	5	FSM	ENSMUSG00000028104.15	ENSMUST00000131641.2	647	5	-3004	-517	-3004	-5	multi-exon	FALSE	canonical	3	81	junction_2	9.52299847737046	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAACATGTCTAACAGAGT	NA	False	NA	-5	True	NA	NA	NA	96491997	96485192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959
ES.22157.17	chr3	-	2833	2	FSM	ENSMUSG00000045327.8	ENSMUST00000059190.3	2828	2	0	-5	0	2	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGGTGACAAATGAT	NA	False	NA	NA	False	AATAAA	-23	NA	96537135	96513972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96516444_96536773
ES.22157.18	chr3	-	2980	3	NNC	ENSMUSG00000045327.8	novel	3228	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTGGTGACAAATG	NA	False	NA	NA	False	AATAAA	-21	NA	96537127	96513974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96516736_96531842_96531983_96537048
ES.22157.2	chr3	-	1600	8	NNC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	-5	-2	intron_retention	TRUE	canonical	0	0	junction_6	42.191497354083	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	-2	True	NA	NA	NA	96501480	96485189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96493092_96493181_96501399
ES.22157.3	chr3	-	1366	8	NNC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	1400	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	39.3767775756841	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	-2	True	NA	NA	NA	96500075	96485189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488961_96489090_96489403_96489572_96500034
ES.22157.4	chr3	-	3803	2	NNC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	-2	True	NA	NA	NA	96501474	96485189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485535_96498016
ES.22157.5	chr3	-	1232	7	NNC	ENSMUSG00000028104.15	novel	607	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6530031690977	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	False	NA	-2	True	NA	NA	NA	96501481	96485189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485905_96487113_96487219_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
ES.22157.6	chr3	-	1436	8	NNC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.499314644223	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96501473	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489608_96501399
ES.22157.7	chr3	-	2493	7	Fusion	ENSMUSG00000045327.8_ENSMUSG00000028104.15	novel	1427	8	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_5	49.7962515322857	76	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96537135	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_96485905_96487113_96487823_96488150_96488220_96488959_96489572_96505033_96505196_96531842_96531983_96537048
ES.22157.8	chr3	-	3679	6	NNC	ENSMUSG00000028104.15	novel	607	7	NA	NA	-2619	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	36.5436725029108	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGTCTAACAGAGTGA	NA	False	NA	-3	True	NA	NA	NA	96491612	96485190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488961
ES.22158.1	chr3	+	765	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	-40	1883	-40	8	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTACTGTTCTGGAAACT	8595	False	NA	24	True	AATAAA	-28	NA	96537208	96539224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ES.22158.10	chr3	+	1576	7	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	-885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1643.96218529097	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8642	False	NA	5	True	ATTAAA	-17	NA	96537255	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004_96539856_96539995
ES.22158.12	chr3	+	1955	1	NIC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	1	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTTTATTACTTTAC	8643	False	NA	11	True	AATAAA	-15	NA	96537256	96539211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537300_96539200
ES.22158.13	chr3	+	2459	4	NIC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	2	-883	intron_retention	FALSE	canonical	3	2213	junction_2	1027.16340796714	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTGGCCCTTCTCTTCC	8644	False	NA	7	True	ATTAAA	-19	NA	96537257	96540224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537345_96537617_96537678_96537792_96538885_96539004
ES.22158.14	chr3	+	1617	7	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	2	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1962.22719264502	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8644	False	NA	5	True	ATTAAA	-17	NA	96537257	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537382_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004_96539844_96539980
ES.22158.15	chr3	+	1463	7	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	2	-885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1674.23017135239	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8644	False	NA	5	True	ATTAAA	-17	NA	96537257	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004_96539770_96540023
ES.22158.17	chr3	+	1570	7	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	2	-889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1643.96218529097	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGCTATTGGCCCTTC	8644	False	NA	1	True	ATTAAA	-13	NA	96537257	96540218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004_96539850_96539989
ES.22158.19	chr3	+	1834	5	NIC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	2	-883	intron_retention	FALSE	canonical	3	4271	junction_2	82.5359770039708	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTGGCCCTTCTCTTCC	8644	False	NA	7	True	ATTAAA	-19	NA	96537257	96540224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537345_96537617_96537871_96538181_96538319_96538747_96538885_96539004
ES.22158.22	chr3	+	739	6	NIC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	1739.9437462171	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTATTACTTTACTG	8650	False	NA	13	True	AATAAA	-17	NA	96537263	96539213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537382_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ES.22158.25	chr3	+	1547	3	NIC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	12	-9	intron_retention	FALSE	canonical	3	4354	junction_1	37	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTATGTTTATTACT	8654	False	NA	7	True	AATAAA	-11	NA	96537267	96539207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537345_96537617_96538885_96539004
ES.22158.27	chr3	+	1075	4	NIC	ENSMUSG00000038374.11	novel	2620	5	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	2213	junction_1	1059.56815102506	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATTACTTTACTGTT	8863	False	NA	15	True	AATAAA	-19	NA	96537476	96539215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537678_96537792_96538319_96538747_96538885_96539004
ES.22158.28	chr3	+	728	5	ISM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	259	1894	-5	-3	3prime_fragment	FALSE	canonical	3	2531	junction_1	811.992764746091	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTATTACTTTACTG	8894	False	NA	13	True	AATAAA	-17	NA	96537507	96539213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ES.22158.29	chr3	+	1492	6	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	104	-881	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1731.84255635436	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGCCCTTCTCTTCCTT	9003	False	NA	9	True	ATTAAA	-21	NA	96537616	96540226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004_96539856_96539995
ES.22158.4	chr3	+	1731	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	-8	885	-8	-885	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8627	False	NA	5	True	ATTAAA	-17	NA	96537240	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ES.22158.5	chr3	+	1593	7	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	-7	-885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1643.96218529097	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8628	False	NA	5	True	ATTAAA	-17	NA	96537241	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004_96539844_96539980
ES.22158.7	chr3	+	2149	5	NIC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	3	-885	intron_retention	FALSE	canonical	3	2531	junction_2	790.037657330333	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTATTGGCCCTTCTCTT	8638	False	NA	5	True	ATTAAA	-17	NA	96537251	96540222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538885_96539004
ES.22158.9	chr3	+	824	5	ISM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	1897	0	-6	intron_retention	FALSE	canonical	3	2531	junction_2	801.218759141347	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTTTATTACTTTA	8642	False	NA	10	True	AATAAA	-14	NA	96537255	96539210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747
ES.22159.1	chr3	+	3050	2	FSM	ENSMUSG00000028102.16	ENSMUST00000147821.2	506	2	-1616	-928	7	2	multi-exon	FALSE	canonical	3	279	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTATTCAATTCAAG	NA	False	NA	11	True	ATTAAA	-18	NA	96542752	96552044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96544649_96550890
ES.22159.10	chr3	+	6628	1	NIC	ENSMUSG00000028102.16	novel	2235	4	NA	NA	1046	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96545414	96552042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96545400_96552000
ES.22159.3	chr3	+	1745	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	41	638	-29	2	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTATTCAATTCAAG	NA	False	NA	11	True	ATTAAA	-18	NA	96542786	96552044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ES.22159.5	chr3	+	2547	3	NIC	ENSMUSG00000028102.16	novel	2424	4	NA	NA	1	6	intron_retention	FALSE	canonical	3	279	junction_2	10.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGGTCAAAATTTGTG	NA	False	NA	9	True	AATAAA	-25	NA	96542969	96552688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96543060_96543989_96544649_96550890
ES.22159.6	chr3	+	2202	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	228	-6	5	6	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGGTCAAAATTTGTG	NA	False	NA	9	True	AATAAA	-25	NA	96542973	96552688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ES.22159.7	chr3	+	1135	5	FSM	ENSMUSG00000028102.16	ENSMUST00000048766.15	1122	5	-13	0	6	0	multi-exon	FALSE	canonical	3	16	junction_4	117.48829728956	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542974	96552042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890_96551332_96551751
ES.22159.9	chr3	+	1880	3	NIC	ENSMUSG00000028102.16	novel	1122	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	279	junction_2	10.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542990	96552042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96543060_96543989_96544649_96550890
ES.2216.1	chr1	-	3244	1	FSM	ENSMUSG00000097416.4	ENSMUST00000180429.3	3287	1	45	-2	45	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTCTTAGCACCATT	NA	False	NA	NA	False	NA	NA	NA	191722038	191718794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191718800_191722000
ES.2216.2	chr1	-	709	1	FSM	ENSMUSG00000097416.4	ENSMUST00000180429.3	3287	1	-11	2589	5	-2589	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATAAGAAATGAC	NA	False	NA	NA	False	NA	NA	NA	191722094	191721385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191721400_191722100
ES.22160.1	chr3	+	249	1	Intergenic	novelGene_18292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAATCCCTAGTTCATA	792	False	NA	NA	False	NA	NA	NA	96561124	96561373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96561100_96561400
ES.22161.1	chr3	+	175	1	Intergenic	novelGene_18293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96573270	96573445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96573300_96573400
ES.22162.1	chr3	+	4472	12	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	-87	1	intron_retention	FALSE	canonical	0	0	junction_1	29.3941580747879	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTTGTGGTTTTTGT	184	False	NA	17	True	AATAAA	-17	NA	96577359	96598349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96577417_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760
ES.22162.10	chr3	+	3304	14	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	4047	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.827826282021	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	4514	False	NA	16	True	AATAAA	-16	NA	96581689	96598348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96581799_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ES.22162.11	chr3	+	3774	13	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	-3927	-1	intron_retention	FALSE	canonical	0	0	junction_1	36.8257910830017	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTATTGTTGTGGTTTTT	6306	False	NA	15	True	AATAAA	-15	NA	96583481	96598347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96583520_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ES.22162.12	chr3	+	3344	15	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	-3916	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.356836951794	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	6317	False	NA	16	True	AATAAA	-16	NA	96583492	96598348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96583520_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596238_96596365_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ES.22162.13	chr3	+	3896	8	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	-793	3267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.40380486848568	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAATAGCTGACTGATC	9440	False	NA	NA	False	NA	NA	NA	96586615	96593785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96586701_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498
ES.22162.14	chr3	+	3591	11	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	-791	-5	intron_retention	FALSE	canonical	1	1	junction_1	38.0931752417674	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCCTATTGTTGTGGT	9442	False	NA	11	True	AATAAA	-11	NA	96586617	96598343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96586701_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ES.22162.15	chr3	+	5114	8	NIC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	-448	0	intron_retention	FALSE	canonical	3	17	junction_5	32.2964583892692	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGCAGAAAACAGA	9785	False	NA	-7	True	NA	NA	NA	96586960	96598325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96587011_96587786_96587845_96587942_96588014_96588277_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760
ES.22162.17	chr3	+	2655	7	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	11692	0	1926	0	3prime_fragment	FALSE	canonical	3	17	junction_2	35.9324211386999	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGCAGAAAACAGA	NA	False	NA	-7	True	NA	NA	NA	96589334	96598325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ES.22162.2	chr3	+	3504	14	NIC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	34.4249462320121	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	279	False	NA	18	True	AATAAA	-18	NA	96577454	96598350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
ES.22162.3	chr3	+	3904	13	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	-42	-25	-42	2	intron_retention	FALSE	canonical	1	2	junction_2	36.3600818969864	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	425	False	NA	18	True	AATAAA	-18	NA	96577600	96598350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96577766_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ES.22162.4	chr3	+	4538	12	ISM	ENSMUSG00000038354.14	ENSMUST00000122960.6	3295	14	0	-20	0	-3	intron_retention	FALSE	canonical	1	2	junction_2	29.821784704729	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCTATTGTTGTGGTTT	467	False	NA	13	True	AATAAA	-13	NA	96577642	96598345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96577766_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760
ES.22162.6	chr3	+	4968	12	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	2	2	intron_retention	FALSE	canonical	2	4	junction_11	37.6256023262515	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTGTGGTTTTTGTC	469	False	NA	18	True	AATAAA	-18	NA	96577644	96598350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598240
ES.22162.7	chr3	+	3211	14	NNC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	35.2504144085758	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTATTGTTGTGGTT	480	False	NA	12	True	AATAAA	-12	NA	96577655	96598344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598240
ES.22162.8	chr3	+	4138	10	ISM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	214	4561	18	3269	5prime_fragment	FALSE	canonical	3	6	junction_1	5.35643146364175	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGCTGACTGATCTT	485	False	NA	NA	False	NA	NA	NA	96577660	96593787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498
ES.22162.9	chr3	+	3876	13	NNC	ENSMUSG00000038354.14	novel	4052	13	NA	NA	4017	0	intron_retention	FALSE	canonical	0	0	junction_1	36.8257910830017	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	4484	False	NA	16	True	AATAAA	-16	NA	96581659	96598348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96581799_96585448_96585584_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ES.22163.1	chr3	-	175	1	Intergenic	novelGene_18294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGCA	9467	False	NA	NA	False	NA	NA	NA	96584685	96584510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96584500_96584700
ES.22164.1	chr3	+	2944	13	NNC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-53	2651	intron_retention	FALSE	canonical	0	0	junction_1	68.2757379226976	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGTTATTTCTGACT	2535	False	NA	NA	False	AATAAA	-20	NA	96603646	96616037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96603848_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96614472
ES.22164.10	chr3	+	4108	11	NNC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-24	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	57.7668590110281	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGCGTCATGGAGGG	2622	False	NA	3	True	AATAAA	-13	NA	96603733	96613276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610943_96611054_96611509_96611664
ES.22164.11	chr3	+	3438	12	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	38	0	-20	0	intron_retention	FALSE	canonical	3	88	junction_1	27.7005832799525	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2626	False	NA	5	True	AATAAA	-15	NA	96603737	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374
ES.22164.12	chr3	+	2801	14	NNC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_10	52.8838181758094	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2627	False	NA	5	True	AATAAA	-15	NA	96603738	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611072_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.13	chr3	+	3287	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	41	-8	-17	-3	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGAGGGGAAGGGATGT	2629	False	NA	13	True	AATAAA	-23	NA	96603740	96613286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.14	chr3	+	2448	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	52	358	-6	130	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCAAAGATGAAATCCCT	2640	False	NA	NA	False	CATAAA	-17	NA	96603751	96612920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.15	chr3	+	3382	12	NIC	ENSMUSG00000028101.19	novel	2281	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	24	junction_10	49.8205042590709	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGCGTCATGGAGGG	2644	False	NA	3	True	AATAAA	-13	NA	96603755	96613276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611509_96611664
ES.22164.16	chr3	+	3202	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	-288	17	-281	-17	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACATT	2999	False	NA	96	True	NA	NA	NA	96604110	96613369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.17	chr3	+	3549	13	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	-199	-19	intron_retention	FALSE	canonical	3	24	junction_10	47.3723430799965	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGAACA	3081	False	NA	94	True	NA	NA	NA	96604192	96613367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
ES.22164.18	chr3	+	3296	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	-11	108	-4	0	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3276	False	NA	5	True	AATAAA	-15	NA	96604387	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.19	chr3	+	3398	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	-10	5	-3	-5	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATTTAAAGTGTTTAT	3277	False	NA	108	True	NA	NA	NA	96604388	96613381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.2	chr3	+	3001	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-52	-91	-52	-17	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACATT	2536	False	NA	96	True	NA	NA	NA	96603647	96613369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.20	chr3	+	2791	14	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_10	45.862026163123	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3288	False	NA	5	True	AATAAA	-15	NA	96604399	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.21	chr3	+	3439	12	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	105	junction_1	24.9007949025098	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3288	False	NA	5	True	AATAAA	-15	NA	96604399	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96604512_96606735_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.22	chr3	+	2461	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	9	461	9	135	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAAATCCCTTGCCT	3296	False	NA	NA	False	CATAAA	-22	NA	96604407	96612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.23	chr3	+	3260	14	NNC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	14	2651	intron_retention	FALSE	canonical	0	0	junction_13	51.5973257414436	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGTTATTTCTGACT	3301	False	NA	NA	False	AATAAA	-20	NA	96604412	96616037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96614472
ES.22164.24	chr3	+	3155	14	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	-10	12	-10	-1	intron_retention	FALSE	canonical	3	19	junction_2	47.114489787421	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGCGTCATGGAGGGG	3311	False	NA	4	True	AATAAA	-14	NA	96604422	96613277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.25	chr3	+	4734	9	NNC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	-2	2647	intron_retention	FALSE	canonical	0	0	junction_8	58.5212301220677	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTTAGAGTTATTTCT	3319	False	NA	NA	False	AATAAA	-16	NA	96604430	96616033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96609038_96609489_96609564_96609672_96610319_96613181
ES.22164.26	chr3	+	3377	12	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_10	47.6927147615054	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3320	False	NA	5	True	AATAAA	-15	NA	96604431	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374
ES.22164.27	chr3	+	2683	15	FSM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	1	11	1	0	multi-exon	FALSE	canonical	3	19	junction_2	45.7727304969111	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3322	False	NA	5	True	AATAAA	-15	NA	96604433	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.28	chr3	+	3635	22	Fusion	ENSMUSG00000028101.19_ENSMUSG00000028098.14	novel	2695	15	NA	NA	-6	-202	intron_retention	FALSE	canonical	0	0	junction_13	281.725449728886	611	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	3331	False	NA	20	True	ATTAAA	-20	NA	96604442	96698266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96622497_96622712_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693337_96695885_96696002_96697190
ES.22164.29	chr3	+	3038	15	NNC	ENSMUSG00000028101.19	novel	2695	15	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_1	63.204236489369	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTTTATTACTGT	3332	False	NA	114	True	AAAAAG	-5	NA	96604443	96613387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96605282_96605434_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.3	chr3	+	3414	13	ISM	ENSMUSG00000028101.19	ENSMUST00000162934.8	2281	14	-92	-579	-34	-17	intron_retention	FALSE	canonical	3	24	junction_10	49.2191104484156	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACATT	2554	False	NA	96	True	NA	NA	NA	96603665	96613369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
ES.22164.30	chr3	+	2809	15	NNC	ENSMUSG00000028101.19	novel	2695	15	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_12	72.9585079175213	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGCGTCATGGAGGGG	3340	False	NA	4	True	AATAAA	-14	NA	96604451	96613277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611670_96611703_96611947_96611994_96612164
ES.22164.31	chr3	+	3031	14	NNC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_7	61.8165830568821	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAAGTGTTTATTACT	3340	False	NA	112	True	AAAAAG	-3	NA	96604451	96613385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609304_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.33	chr3	+	3346	14	NNC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_1	72.9746652965804	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	3346	False	NA	5	True	AATAAA	-15	NA	96604457	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96604512_96605282_96605434_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
ES.22164.34	chr3	+	865	5	Antisense	novelGene_ENSMUSG00000028099.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3041	False	NA	NA	False	NA	NA	NA	96621653	96624561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_96621676_96622435_96622587_96622949_96623011_96623744_96623797_96623982
ES.22164.35	chr3	+	2136	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-115	188	-115	-188	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCATGTCTGAAACTT	4680	False	NA	34	True	ATTAAA	-34	NA	96634864	96698280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.36	chr3	+	3300	10	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	-115	377	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	275.495289108521	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATTATCAGTTATCT	4680	False	NA	NA	False	ATTAAA	-26	NA	96634864	96699331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96665292_96665351_96672960_96673074_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.37	chr3	+	2326	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-114	-3	-114	3	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGCGTCTCAAAAG	4681	False	NA	17	True	AATAAA	-24	NA	96634865	96698471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.38	chr3	+	2251	10	NIC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	-107	-207	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	305.375825928852	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGTTTGTAAAGCTCA	4688	False	NA	15	True	ATTAAA	-15	NA	96634872	96698261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96661650_96661710_96662378_96662521_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.39	chr3	+	5893	8	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	-100	1	intron_retention	FALSE	canonical	3	647	junction_6	63.1567534805588	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	4695	False	NA	15	True	AATAAA	-22	NA	96634879	96698469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96661650_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.4	chr3	+	3453	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	-24	-109	-24	1	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTTTATTACTGT	2564	False	NA	114	True	AAAAAG	-5	NA	96603675	96613387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22164.41	chr3	+	5124	9	NNC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	-93	-2	intron_retention	FALSE	canonical	0	0	junction_2	246.529283250489	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAGCTTCAGCGTCTC	4702	False	NA	12	True	AATAAA	-19	NA	96634886	96698466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96662468_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.42	chr3	+	2198	10	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	-78	-202	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	275.495289108521	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4717	False	NA	20	True	ATTAAA	-20	NA	96634901	96698266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96665292_96665351_96672960_96673074_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.43	chr3	+	2098	6	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	-78	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	320.673416422378	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTCAGCGTCTCAA	4717	False	NA	14	True	AATAAA	-21	NA	96634901	96698468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96682945_96683158_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.44	chr3	+	3141	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	-46	-886	-46	400	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTTGTTAGCTCAG	4749	False	NA	NA	False	AGTAAA	-20	NA	96634933	96699354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.46	chr3	+	1970	9	NNC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	21	-202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	245.887169246384	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4824	False	NA	20	True	ATTAAA	-20	NA	96635008	96698266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96665300_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.47	chr3	+	1880	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	32	297	24	-297	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGGATTATTTTATT	4827	False	NA	-75	True	CATAAA	-33	NA	96635011	96698171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.49	chr3	+	2102	8	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	264.106502945231	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAGCTTCAGCGTCTC	4828	False	NA	12	True	AATAAA	-19	NA	96635012	96698466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.5	chr3	+	2967	13	NIC	ENSMUSG00000028101.19	novel	2281	14	NA	NA	-7	-1	intron_retention	TRUE	canonical	0	0	junction_1	63.6533035714216	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGGGGAAGGGATGTTG	2581	False	NA	15	True	AATAAA	-25	NA	96603692	96613288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96603848_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
ES.22164.50	chr3	+	1738	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	36	435	28	-435	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGGGAGATGTGGGAGAT	4831	False	NA	NA	False	ATTAAA	-14	NA	96635015	96698033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.51	chr3	+	2965	8	NIC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	29	366	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	253.528165323391	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTTGAGTAAAATATT	4832	False	NA	NA	False	ATTAAA	-15	NA	96635016	96699320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.52	chr3	+	4141	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	37	-1969	29	1483	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTGCCCTGTGCAT	4832	False	NA	NA	False	NA	NA	NA	96635016	96700437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.53	chr3	+	2134	11	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	30	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	333.078804489268	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4833	False	NA	20	True	ATTAAA	-20	NA	96635017	96698266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96662468_96662521_96665292_96665351_96672960_96673074_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.54	chr3	+	2040	7	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	39	-5	combination_of_known_splicesites	FALSE	canonical	3	119	junction_1	220.417028985209	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATTAAGCTTCAGCGT	4842	False	NA	9	True	AATAAA	-16	NA	96635026	96698463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.55	chr3	+	2004	10	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	47	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305.784601022063	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4850	False	NA	20	True	ATTAAA	-20	NA	96635034	96698266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96662468_96662521_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.56	chr3	+	2083	8	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	59	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	253.528165323391	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTCAGCGTCTCAA	4862	False	NA	14	True	AATAAA	-21	NA	96635046	96698468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96635227_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.57	chr3	+	2179	10	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	72	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305.784601022063	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAGCTTCAGCGTCTC	4875	False	NA	12	True	AATAAA	-19	NA	96635059	96698466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96635227_96661650_96661710_96662468_96662521_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.58	chr3	+	2593	5	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	54824	200	54649	-200	3prime_fragment	FALSE	canonical	3	647	junction_3	45.9639804629669	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAAGCTCATTTTTCA	NA	False	NA	22	True	ATTAAA	-22	NA	96689803	96698268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ES.22164.59	chr3	+	5268	2	NNC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	62475	5070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAGTCCATCAAATTGG	497	False	NA	NA	False	NA	NA	NA	96697629	96704024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96702118_96703244
ES.22164.6	chr3	+	2724	15	NIC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	47.4118408529053	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2617	False	NA	5	True	AATAAA	-15	NA	96603728	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96603848_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.7	chr3	+	2362	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	30	466	-28	22	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGTTCTCTTTGACCAT	2618	False	NA	NA	False	NA	NA	NA	96603729	96612812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.8	chr3	+	2771	14	NNC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	-28	0	intron_retention	FALSE	canonical	1	1	junction_8	52.9106649130254	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2618	False	NA	5	True	AATAAA	-15	NA	96603729	96613278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609729_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ES.22164.9	chr3	+	6045	13	ISM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	30	-2755	-28	2647	intron_retention	FALSE	canonical	3	88	junction_1	28.0132657067247	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTTAGAGTTATTTCT	2618	False	NA	NA	False	AATAAA	-16	NA	96603729	96616033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
ES.22165.1	chr3	-	2999	1	Antisense	novelGene_ENSMUSG00000028101.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCACTTGGGAGATGA	NA	False	NA	NA	False	NA	NA	NA	96604151	96601152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_96601200_96604200
ES.22166.1	chr3	-	986	4	Antisense	novelGene_ENSMUSG00000028101.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAACCAAA	NA	False	NA	NA	False	NA	NA	NA	96611839	96610467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_96610974_96611052_96611222_96611372_96611506_96611661
ES.22166.2	chr3	-	1374	1	Antisense	novelGene_ENSMUSG00000028101.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAACCAAA	NA	False	NA	NA	False	NA	NA	NA	96611841	96610467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_96610500_96611800
ES.22167.1	chr3	-	2029	5	NIC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	2	507	intron_retention	FALSE	canonical	3	53	junction_4	6.32455532033676	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGAGTTCTCTGTCCA	NA	False	NA	NA	False	AAAAAG	-14	NA	96615876	96612875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96613845_96614225_96614617_96614873_96615126_96615307_96615492_96615643
ES.22167.2	chr3	-	1337	6	NNC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	415	507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.6359123106629	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGAGTTCTCTGTCCA	NA	False	NA	NA	False	AAAAAG	-14	NA	96615440	96612875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615277
ES.22167.3	chr3	-	1165	8	NIC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	18.0611207191761	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAGTGAA	NA	False	NA	0	True	AATAAA	-15	NA	96615854	96613382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615203_96615307_96615492_96615643
ES.22167.4	chr3	-	1099	7	NNC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.4289706702336	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	96615862	96613383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615277_96615492_96615643
ES.22167.5	chr3	-	1150	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	-11	-100	-3	0	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	96615866	96613383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
ES.22167.6	chr3	-	1228	7	NIC	ENSMUSG00000028100.12	novel	1110	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_1	6.37704215656966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTTTTTAAGTGA	NA	False	NA	-1	True	AATAAA	-14	NA	96615862	96613383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96615126_96615307_96615492_96615643
ES.22167.7	chr3	-	1960	3	FSM	ENSMUSG00000028100.12	ENSMUST00000196773.2	671	3	-1290	1	6	0	multi-exon	FALSE	canonical	3	52	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTTTTTTTAAGTG	NA	False	NA	-2	True	AATAAA	-13	NA	96615849	96613384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96613560_96613683_96613845_96614225
ES.22168.1	chr3	-	2134	16	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	3	2302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.8567375544683	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTTGTGTCTGCCTTC	NA	False	NA	NA	False	AATAAA	-23	NA	96634788	96616503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96616742_96619143_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ES.22168.10	chr3	-	4606	12	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	1	junction_9	67.0105456114222	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634762	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96626882_96629855_96629942_96631112_96631369_96633149_96633316_96634664
ES.22168.11	chr3	-	2323	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634816	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
ES.22168.12	chr3	-	2419	15	FSM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	-16	3	-3	-3	multi-exon	FALSE	canonical	3	35	junction_14	52.4860039652944	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634773	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634428
ES.22168.14	chr3	-	2231	14	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	60	-3	intron_retention	FALSE	canonical	0	0	junction_11	63.0562818009135	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634884	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630989_96631369_96633149_96633316_96634664
ES.22168.16	chr3	-	2139	15	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.9865979332015	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATATGTATCTGTTC	NA	False	NA	NA	False	AATAAA	-13	NA	96634786	96618842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631309_96633149_96633316_96634660
ES.22168.17	chr3	-	2155	15	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	60.9163444439024	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTATATGTATCTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	96634760	96618843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631356_96633149_96633316_96634664
ES.22168.2	chr3	-	3673	10	ISM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	7920	-2334	4298	2301	3prime_fragment	FALSE	canonical	3	175	junction_5	24.8685432714593	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGTTGTGTCTGCCTT	2971	False	NA	NA	False	AATAAA	-22	NA	96626837	96616504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776
ES.22168.20	chr3	-	2208	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	22	160	22	-127	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTTGTACTGACCCCC	NA	False	NA	NA	False	NA	NA	NA	96634922	96618965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ES.22168.21	chr3	-	2237	15	NNC	ENSMUSG00000028099.9	novel	2406	15	NA	NA	3	-140	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	73.3420835843228	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCGGCTGCAGATTCT	NA	False	NA	NA	False	NA	NA	NA	96634788	96618978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631309_96633149_96633316_96634428
ES.22168.22	chr3	-	2145	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-9	-144	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGCTCGGCTGCAGA	NA	False	NA	NA	False	NA	NA	NA	96634779	96618982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
ES.22168.23	chr3	-	2173	15	NNC	ENSMUSG00000028099.9	novel	2406	15	NA	NA	-3	-144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.7156302372136	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGCTCGGCTGCAGA	NA	False	NA	NA	False	NA	NA	NA	96634760	96618982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634520
ES.22168.24	chr3	-	134	1	Intergenic	novelGene_18295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGATTTAAAA	6468	False	NA	NA	False	NA	NA	NA	96623340	96623206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96623200_96623300
ES.22168.25	chr3	-	130	1	Intergenic	novelGene_18296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	4191	False	NA	NA	False	NA	NA	NA	96625617	96625487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96625500_96625600
ES.22168.26	chr3	-	939	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	-13	-3	-12	0	multi-exon	FALSE	canonical	3	207	junction_1	7.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTGTGTGCCAGTCAT	NA	False	NA	-1	True	AATGAA	-22	NA	96634804	96630735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96631369_96633149_96633316_96634664
ES.22168.27	chr3	-	1169	3	NIC	ENSMUSG00000028099.9	novel	2406	15	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	35	junction_2	86	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTTGGTGTGTGCCAG	NA	False	NA	-5	True	AATGAA	-18	NA	96634802	96630739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96631369_96633149_96633316_96634428
ES.22168.28	chr3	-	2980	1	FSM	ENSMUSG00000104795.2	ENSMUST00000197075.2	795	1	-2153	-32	-2153	32	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACATAATAGGAACATC	NA	False	NA	NA	False	NA	NA	NA	96634789	96631809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96631800_96634800
ES.22168.29	chr3	-	1619	2	ISM	ENSMUSG00000028099.9	ENSMUST00000141377.8	808	4	-7	1074	-7	-1071	5prime_fragment	FALSE	canonical	3	222	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACATAATAGGAACATC	NA	False	NA	NA	False	NA	NA	NA	96634777	96631809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_96633316_96634664
ES.22168.3	chr3	-	2336	14	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-12	2	intron_retention	FALSE	canonical	2	2	junction_8	62.6068790291861	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATCTGTTCTTAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	96634804	96618836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624084_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
ES.22168.30	chr3	-	1867	2	ISM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	-32	12971	2	-1071	5prime_fragment	FALSE	canonical	3	35	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACATAATAGGAACATC	NA	False	NA	NA	False	NA	NA	NA	96634789	96631809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_96633316_96634428
ES.22168.4	chr3	-	2246	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	111	33	-41	0	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634833	96618838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ES.22168.6	chr3	-	3487	12	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_7	101.041927309311	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634788	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96622587_96622949_96623797_96623982_96624064_96626549_96626643_96626734_96626882_96629855_96629942_96631112_96631309_96633149_96633316_96634664
ES.22168.7	chr3	-	2023	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	58.8212617035912	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634779	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96634664
ES.22168.8	chr3	-	2445	13	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	175	junction_5	22.3003487765451	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634804	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
ES.22168.9	chr3	-	2256	15	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	59.9352116191871	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATGTATCTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	96634788	96618841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624122_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ES.22169.1	chr3	-	176	1	Intergenic	novelGene_18297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	96655605	96655429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96655400_96655600
ES.2217.1	chr1	-	2244	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	-30	0	-30	0	multi-exon	FALSE	canonical	1	2	junction_6	1.02469507659596	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCTGGGGCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	191776898	191729167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
ES.2217.2	chr1	-	180	1	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAGAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	191733541	191733361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_191733400_191733500
ES.2217.3	chr1	-	784	1	FSM	ENSMUSG00000103653.2	ENSMUST00000195526.2	631	1	-69	-84	-69	84	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCAGCTATGGCCCTCCG	NA	False	NA	NA	False	AATAAA	-34	NA	191758819	191758035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191758000_191758800
ES.22170.1	chr3	-	174	1	Intergenic	novelGene_18298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGAATTGC	8956	False	NA	NA	False	NA	NA	NA	96658072	96657898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96657900_96658100
ES.22171.1	chr3	-	178	1	Intergenic	novelGene_18299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTATTCCACA	NA	False	NA	NA	False	NA	NA	NA	96690912	96690734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96690700_96690900
ES.22172.1	chr3	+	3054	9	FSM	ENSMUSG00000038298.15	ENSMUST00000058865.14	2406	9	-652	4	-39	-4	multi-exon	FALSE	canonical	3	10	junction_1	6.6226410894748	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTGGTAAAATCTATC	7067	False	NA	NA	False	AATAAA	-18	NA	96736739	96778238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22172.2	chr3	+	2468	10	NNC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	4	-8	intron_retention	FALSE	canonical	0	0	junction_1	8.8874998914761	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTATTTGGTAAAATC	7110	False	NA	NA	False	AATAAA	-14	NA	96736782	96778234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96736866_96737404_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22172.3	chr3	+	2029	10	NIC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	4	2	intron_retention	FALSE	canonical	1	2	junction_1	8.45175122477183	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTTATAGAAGTGTG	7110	False	NA	NA	False	ATTAAA	-12	NA	96736782	96777790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96736866_96737399_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22172.4	chr3	+	1955	9	NNC	ENSMUSG00000038298.15	novel	531	2	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1	junction_1	8.68907359849138	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCTGTTATAGAAGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	96740530	96777788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96740615_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22172.5	chr3	+	2256	9	NIC	ENSMUSG00000038298.15	novel	531	2	NA	NA	3	9	intron_retention	FALSE	canonical	2	4	junction_1	7.93626958967499	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGAAGTGTGCTTTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	96740544	96777797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_96740921_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22172.6	chr3	+	2368	9	NNC	ENSMUSG00000038298.15	novel	531	2	NA	NA	19	-11	intron_retention	FALSE	canonical	1	1	junction_1	8.68907359849138	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATCTATTTGGTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	96740560	96778231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_96740615_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ES.22173.1	chr3	-	217	1	Intergenic	novelGene_18300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGTTTTAAAAAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	96746411	96746194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96746200_96746400
ES.22174.1	chr3	-	4994	1	Intergenic	novelGene_18301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGGGTAACCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	96770363	96765369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96765400_96770400
ES.22174.2	chr3	-	5571	1	Intergenic	novelGene_18302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATAGTGTGTGTGTCCG	NA	False	NA	NA	False	NA	NA	NA	96772086	96766515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96766500_96772100
ES.22175.1	chr3	-	6283	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	27	-1712	-7	1712	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTTCT	1890	False	NA	NA	False	NA	NA	NA	96812635	96773884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.10	chr3	-	1709	14	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	29	398	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	41.6774029560356	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGGTCACTTGTCCA	1926	False	NA	-23	True	AGTAAA	-20	NA	96812599	96778403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800832_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.11	chr3	-	1582	14	NNC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	-13	390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.2944399311913	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGGCCTTGGGGTCA	1884	False	NA	-31	True	AGTAAA	-12	NA	96812641	96778411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96778731_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.12	chr3	-	2890	1	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	13	-19925	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGCAGGTTCCAGTATA	1876	False	NA	NA	False	NA	NA	NA	96812649	96809759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96809800_96812600
ES.22175.2	chr3	-	6051	12	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	12	1708	intron_retention	FALSE	canonical	1	1	junction_9	45.2148224069194	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAGTGGAGCATGTG	1909	False	NA	NA	False	NA	NA	NA	96812616	96773888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96804648_96804753_96805807_96805868_96812497
ES.22175.3	chr3	-	5508	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	61	-971	27	971	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGAACACTGTAGCTG	1924	False	NA	NA	False	NA	NA	NA	96812601	96774625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.4	chr3	-	4598	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	16	-16	16	16	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCACTGAATGTCATGGC	1879	False	NA	NA	False	AATAAA	-30	NA	96812646	96775580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.5	chr3	-	4569	14	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	-10	14	intron_retention	FALSE	canonical	1	1	junction_10	41.6774029560356	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTCACTGAATGTCATG	1887	False	NA	NA	False	AATAAA	-28	NA	96812638	96775582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800832_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.6	chr3	-	4735	15	NNC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	-2	9	intron_retention	FALSE	canonical	0	0	junction_6	60.7757671901476	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTACACGTCACTGAATG	1895	False	NA	NA	False	AATAAA	-23	NA	96812630	96775587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787838_96788006_96788615_96788698_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.7	chr3	-	2162	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	25	2411	-9	794	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGGAAGCCTCCCTT	1888	False	NA	NA	False	AAGAAA	-13	NA	96812637	96778007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.8	chr3	-	1796	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	14	2788	14	417	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGCTTGGTGTTATGC	1877	False	NA	-4	True	AGTAAA	-39	NA	96812648	96778384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ES.22175.9	chr3	-	1672	13	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	25	398	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	42.4466986021554	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGGTCACTTGTCCA	1922	False	NA	-23	True	AGTAAA	-20	NA	96812603	96778403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96812497
ES.22176.1	chr3	+	174	1	Intergenic	novelGene_18303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAAGT	4920	False	NA	NA	False	NA	NA	NA	96829033	96829207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96829000_96829200
ES.22177.1	chr3	-	178	1	Intergenic	novelGene_18304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	96849301	96849123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96849100_96849300
ES.22178.1	chr3	-	176	1	Intergenic	novelGene_18305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATATATATGAAGT	NA	False	NA	NA	False	NA	NA	NA	96892433	96892257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_96892300_96892400
ES.22179.1	chr3	+	207	1	Intergenic	novelGene_18306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTCTCTTTAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	96993271	96993478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_96993300_96993500
ES.2218.1	chr1	-	4985	3	ISM	ENSMUSG00000037395.17	ENSMUST00000073279.13	3748	10	15826	-15	2074	0	3prime_fragment	FALSE	canonical	1	2	junction_1	15.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACGAAAAAGTATTTAAT	NA	False	NA	NA	False	AATAAA	-27	NA	191806511	191782845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191785456_191800568_191800647_191804214
ES.2218.10	chr1	-	3730	12	NNC	ENSMUSG00000037395.17	novel	3643	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.4598183414858	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822353	191783070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191785456_191785925_191785988_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814123_191814238_191814682_191814761_191821732_191821790_191822035
ES.2218.11	chr1	-	3543	10	FSM	ENSMUSG00000037395.17	ENSMUST00000073279.13	3748	10	-5	210	-5	0	multi-exon	FALSE	canonical	1	2	junction_1	12.9109007441267	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822342	191783070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.12	chr1	-	3570	11	NNC	ENSMUSG00000037395.17	novel	3791	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.916655913974	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822307	191783070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191785456_191785925_191785988_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.13	chr1	-	3957	12	NNC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	-277	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.3160850278497	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822636	191783070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191785456_191785925_191785988_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.14	chr1	-	3748	11	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.1449540151586	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGTCTTCTATTTTT	NA	False	NA	-3	True	ATTAAA	-11	NA	191822307	191783072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.15	chr1	-	3588	11	FSM	ENSMUSG00000037395.17	ENSMUST00000110849.10	3791	11	-24	227	1	-2	multi-exon	FALSE	canonical	1	1	junction_1	12.5143917151414	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGTCTTCTATTTTT	NA	False	NA	-3	True	ATTAAA	-11	NA	191822331	191783072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.16	chr1	-	3711	13	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	125	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	13.1811629060396	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCATGTCTTCTATTTT	NA	False	NA	-4	True	ATTAAA	-10	NA	191822099	191783073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814123_191814238_191814682_191814761_191821732_191821790_191822035
ES.2218.17	chr1	-	11987	1	FSM	ENSMUSG00000037395.17	ENSMUST00000193664.2	2666	1	-1911	-7410	-1911	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCCATGTCTTCTATT	NA	False	NA	-6	True	ATTAAA	-8	NA	191795062	191783075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191783100_191795100
ES.2218.18	chr1	-	1877	4	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	-3708	845	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.2644968324772	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGCTTGTGGTTTGA	NA	False	NA	NA	False	AATACA	-21	NA	191804354	191784038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214
ES.2218.19	chr1	-	3029	13	NNC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	2	845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.6462145767552	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGCTTGTGGTTTGA	NA	False	NA	NA	False	AATACA	-21	NA	191822305	191784038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191785456_191785925_191786168_191786400_191786536_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814123_191814238_191814682_191814761_191821732_191821790_191822035
ES.2218.2	chr1	-	4090	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	-5	-2241	-5	0	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACGAAAAAGTATTTAAT	NA	False	NA	NA	False	AATAAA	-27	NA	191822364	191782845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.20	chr1	-	2795	1	NIC	ENSMUSG00000037395.17	novel	3791	11	NA	NA	6314	841	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAACCTGAGCTTGTGGT	4565	False	NA	NA	False	AATACA	-17	NA	191786837	191784042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191784000_191786800
ES.2218.21	chr1	-	2146	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	53	-355	1	152	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTAAGTTCCTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	191822306	191784731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.22	chr1	-	1605	10	FSM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	13	5	-3	-1	multi-exon	FALSE	canonical	2	7	junction_1	11.5373788665845	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTGGGTTTTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	191822310	191785688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.23	chr1	-	1500	7	ISM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	-19	21516	-5	4946	5prime_fragment	FALSE	canonical	3	31	junction_4	6.80685928555405	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTAGAGTTTCTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	191822342	191807199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.24	chr1	-	6453	1	FSM	ENSMUSG00000037395.17	ENSMUST00000194362.2	3412	1	-3013	-28	-3013	28	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAGACCAGATCTC	NA	False	NA	NA	False	NA	NA	NA	191818570	191812117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191812100_191818600
ES.2218.25	chr1	-	3830	1	NIC	ENSMUSG00000037395.17	novel	3748	10	NA	NA	-1	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTATTTATATATAAA	NA	False	NA	NA	False	AATAAA	-17	NA	191822333	191818503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191818500_191822300
ES.2218.3	chr1	-	3768	10	FSM	ENSMUSG00000037395.17	ENSMUST00000073279.13	3748	10	-9	-11	-9	-4	multi-exon	FALSE	canonical	1	2	junction_1	12.9109007441267	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAACGAAAAAGTATT	NA	False	NA	NA	False	AATAAA	-23	NA	191822346	191782849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.4	chr1	-	3851	11	FSM	ENSMUSG00000037395.17	ENSMUST00000192158.6	3643	11	12	-220	5	-5	multi-exon	FALSE	canonical	1	2	junction_1	16.9351705040132	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTAACGAAAAAGTAT	NA	False	NA	NA	False	AATAAA	-22	NA	191822316	191782850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814123_191814238_191814682_191814761_191821732_191821790_191822035
ES.2218.5	chr1	-	3989	11	NIC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	11.1449540151586	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTGTTAAAATTAACGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	191822332	191782856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_191785456_191785925_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.7	chr1	-	4301	12	NNC	ENSMUSG00000037395.17	novel	1844	12	NA	NA	-243	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.6516838267188	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTTTTGTTAATTCTGA	NA	False	NA	NA	False	TATAAA	-25	NA	191822602	191782949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_191785456_191785925_191786168_191786400_191786536_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.8	chr1	-	3958	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	17	-2131	-5	-95	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGACCATTTTTGTTAA	NA	False	NA	NA	False	TATAAA	-19	NA	191822342	191782955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.2218.9	chr1	-	3842	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	18	-2016	-4	0	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822341	191783070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ES.22180.1	chr3	+	1812	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	-56	-2	-56	2	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGTGTGTAA	NA	False	NA	13	True	NA	NA	NA	97066036	97083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.10	chr3	+	5623	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	10	-5	intron_retention	FALSE	canonical	2	6	junction_3	453.979441531589	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGCATCATGTTGAG	NA	False	NA	12	True	AATAAA	-12	NA	97066102	97083829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075131_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.11	chr3	+	1181	5	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	541.491170288122	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGAATGTTTTGCCTG	NA	False	NA	6	True	NA	NA	NA	97066102	97083885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.12	chr3	+	2015	9	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	14	-4	intron_retention	FALSE	canonical	3	1030	junction_1	86.1434124004848	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066106	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.13	chr3	+	1559	11	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	22	16	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	364.875924116678	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGGGGGAGGTCTCTA	NA	False	NA	-29	True	AATAAA	-33	NA	97066114	97083850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066241_97066373_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.14	chr3	+	5438	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_2	448.736157322863	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066114	97083834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073292_97073400_97073933_97075302_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.15	chr3	+	1665	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	31	4	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_9	374.023469257686	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTTGAGATCAAAGGG	NA	False	NA	21	True	AATAAA	-21	NA	97066123	97083838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083652
ES.22180.16	chr3	+	2380	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	382.408772304981	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAGCATCATGTTGA	NA	False	NA	11	True	AATAAA	-11	NA	97066123	97083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97080399_97081215_97082943_97083110_97083646
ES.22180.17	chr3	+	3191	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	7	junction_6	500.506434881735	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066123	97083834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97075391_97075756_97075890_97078957_97079059_97080399_97080554_97081118_97081215_97082943_97083110_97083646
ES.22180.19	chr3	+	1676	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	33	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	385.806226549604	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGAGGTCTCTACA	NA	False	NA	-27	True	AATAAA	-35	NA	97066125	97083852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075309_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.2	chr3	+	3883	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-54	-4	intron_retention	FALSE	canonical	1	3	junction_5	458.497334294929	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066038	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97075890_97078957_97079059_97081118_97081279_97082943_97083110_97083646
ES.22180.20	chr3	+	3452	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	33	-5	intron_retention	FALSE	canonical	3	1030	junction_1	90.3957286330612	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGAATGTTTTGCCTG	NA	False	NA	6	True	NA	NA	NA	97066125	97083885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.21	chr3	+	3524	9	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	33	0	intron_retention	FALSE	canonical	3	7	junction_5	525.672604859717	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066125	97083834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97075391_97075756_97075890_97078957_97079059_97080399_97080554_97081118_97081215_97082943_97083110_97083646
ES.22180.22	chr3	+	1658	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	381.973756450995	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCATGTTGAGATCAAA	NA	False	NA	18	True	AATAAA	-18	NA	97066126	97083835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073396_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.23	chr3	+	7498	4	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	36	2	intron_retention	FALSE	canonical	3	1030	junction_1	97.0257697727774	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGTGTGTAA	NA	False	NA	13	True	NA	NA	NA	97066128	97083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97079059_97081118_97081215_97082943
ES.22180.24	chr3	+	2024	9	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	36	-4	intron_retention	FALSE	canonical	3	1030	junction_1	87.5457023502582	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066128	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.25	chr3	+	1961	1	FSM	ENSMUSG00000028093.16	ENSMUST00000199346.2	1300	1	-279	-382	40	382	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTAAATCCTTCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	97066132	97068093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97066100_97068100
ES.22180.26	chr3	+	1650	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	42	18	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	383.635533054776	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGAGGTCTCTACA	NA	False	NA	-27	True	AATAAA	-35	NA	97066134	97083852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079035_97081118_97081215_97082943_97083110_97083646
ES.22180.27	chr3	+	1812	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	383.963250556323	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066145	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075131_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.28	chr3	+	1540	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	385.846672035652	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066145	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073420_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.29	chr3	+	6983	6	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	56	0	intron_retention	FALSE	canonical	3	1030	junction_1	83.4251760561523	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066148	97083834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97079059_97081118_97081215_97082943
ES.22180.3	chr3	+	1280	11	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	366.633004515415	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066075	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066110_97066540_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.30	chr3	+	5071	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	65	4	intron_retention	FALSE	canonical	3	1030	junction_1	84.4185394088192	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTTGAGATCAAAGGG	NA	False	NA	21	True	AATAAA	-21	NA	97066157	97083838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.32	chr3	+	2514	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	83	-5	intron_retention	FALSE	canonical	0	0	junction_4	609.149680565732	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGCATCATGTTGAG	NA	False	NA	12	True	AATAAA	-12	NA	97066175	97083829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075131_97075181_97075302_97075890_97078957_97079059_97080399_97080554_97081118_97081215_97082943_97083110_97083646
ES.22180.33	chr3	+	3334	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	86	-2692	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	428.435299147439	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTGACTTATATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	97066178	97078493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97076220
ES.22180.35	chr3	+	3303	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	2461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	429.173009661864	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAATGTGTATTACATC	NA	False	NA	NA	False	ATTAAA	-5	NA	97066179	97078229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97075986
ES.22180.36	chr3	+	2501	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	18	intron_retention	FALSE	canonical	3	1030	junction_1	83.9394825734224	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGAGGTCTCTACA	NA	False	NA	-27	True	AATAAA	-35	NA	97066179	97083852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943
ES.22180.37	chr3	+	2996	9	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	15	intron_retention	FALSE	canonical	3	1030	junction_1	86.3264154242489	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGGGGGAGGTCTCT	NA	False	NA	-30	True	AATAAA	-32	NA	97066179	97083849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.38	chr3	+	1440	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	434.852590552481	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAGCATCATGTTGA	NA	False	NA	11	True	AATAAA	-11	NA	97066179	97083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.39	chr3	+	8210	5	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	0	intron_retention	FALSE	non_canonical	0	0	junction_4	504.465310997694	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066179	97083834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97079059_97081118_97081455_97082260
ES.22180.4	chr3	+	8070	5	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-4	2	intron_retention	FALSE	canonical	3	1030	junction_1	92.8557348794354	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATGTTGAGATCAAAG	NA	False	NA	19	True	AATAAA	-19	NA	97066088	97083836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075302_97081215_97082943
ES.22180.41	chr3	+	2112	9	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	88	-4	intron_retention	FALSE	canonical	2	6	junction_3	406.439648041379	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066180	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075131_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.43	chr3	+	3243	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-138	21	intron_retention	FALSE	canonical	3	1030	junction_1	88.5896294663184	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAGGTCTCTACATGA	NA	False	NA	-24	True	AATAAA	-38	NA	97066273	97083855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.44	chr3	+	5949	5	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	-4	intron_retention	FALSE	canonical	3	1030	junction_1	104.891312795674	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066505	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97075890_97078957_97081215_97082943
ES.22180.45	chr3	+	8541	3	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-3136	-4	intron_retention	FALSE	canonical	3	1183	junction_1	40.5	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAATGTTTTGCCTGT	NA	False	NA	7	True	NA	NA	NA	97071556	97083886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97079059_97081118_97081215_97082943
ES.22180.46	chr3	+	2450	4	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-1349	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	584.180527652958	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAGCATCATGTTGA	NA	False	NA	11	True	AATAAA	-11	NA	97077116	97083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97079059_97081118_97081279_97082943_97083110_97083646
ES.22180.47	chr3	+	3348	5	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	249	1968	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	541.491170288122	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCTTGAACACGGTCT	NA	False	NA	NA	False	NA	NA	NA	97078714	97086583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97079059_97081118_97081215_97082943_97083110_97083646_97085643_97085837
ES.22180.48	chr3	+	182	1	FSM	ENSMUSG00000028093.16	ENSMUST00000198329.2	3291	1	114	2995	114	406	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	97081438	97081620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97081400_97081600
ES.22180.49	chr3	+	2114	1	FSM	ENSMUSG00000028093.16	ENSMUST00000198329.2	3291	1	392	785	392	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	554	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97081716	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97081700_97083800
ES.22180.5	chr3	+	6556	7	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-1	2	intron_retention	FALSE	canonical	3	12	junction_3	451.783502723742	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGTGTGTAA	NA	False	NA	13	True	NA	NA	NA	97066091	97083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073516_97073855_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.6	chr3	+	1689	10	NNC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	380.643023200362	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGCATCATGTTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	97066091	97083830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081209_97082943_97083110_97083646
ES.22180.7	chr3	+	3818	7	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	2	-5	intron_retention	FALSE	canonical	3	1030	junction_1	92.5466849157164	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGAATGTTTTGCCTG	NA	False	NA	6	True	NA	NA	NA	97066094	97083885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.8	chr3	+	6894	6	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	2	3	intron_retention	FALSE	canonical	3	1030	junction_1	93.5662332254537	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGCCTGTGTGTAAA	NA	False	NA	14	True	NA	NA	NA	97066094	97083893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97073288_97073389_97079059_97081118_97081215_97082943_97083110_97083646
ES.22180.9	chr3	+	3924	6	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	5	2	intron_retention	FALSE	canonical	3	1030	junction_1	100.769836756839	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGTGTGTAA	NA	False	NA	13	True	NA	NA	NA	97066097	97083892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97066682_97073158_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ES.22181.1	chr3	-	1156	1	Intergenic	novelGene_18307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97104250	97103094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97103100_97104200
ES.22182.1	chr3	+	268	1	FSM	ENSMUSG00000106536.2	ENSMUST00000199972.2	3292	1	244	2780	244	-2780	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTAGGATCCATATAA	6919	False	NA	NA	False	AATACA	-11	NA	97169914	97170182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97169900_97170200
ES.22183.1	chr3	+	132	1	Intergenic	novelGene_18309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAAAATTTTAAATGACA	NA	False	NA	NA	False	NA	NA	NA	97199679	97199811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_97199700_97199800
ES.22184.10	chr3	-	5872	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-33	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	12.5589965786176	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGAACTGCCTTTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	97134713	97110982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113258_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.11	chr3	-	8071	8	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	57	-5	intron_retention	FALSE	canonical	2	6	junction_3	14.16232426445	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGAACTGCCTTTTTG	3733	False	NA	-14	True	AATAAA	-16	NA	97205176	97110982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
ES.22184.12	chr3	-	5107	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-32	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.7472780695303	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGTGTTTTTTTAAG	NA	False	NA	NA	False	AAAACA	-17	NA	97134712	97111988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113258_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121211_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.13	chr3	-	4139	5	NNC	ENSMUSG00000038256.16	novel	679	3	NA	NA	-1052	-1767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2894191624432	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTGAGTTCCTTCT	NA	False	NA	NA	False	AATACA	-28	NA	97122377	97113710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113873_97114462_97114724_97115793_97118033_97120187_97120288_97121000
ES.22184.14	chr3	-	1684	5	ISM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-52	10814	-52	8	5prime_fragment	FALSE	canonical	3	19	junction_4	10.0343161201947	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAACAAAAACTTA	NA	False	NA	NA	False	ATTAAA	-36	NA	97134732	97121791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.15	chr3	-	1583	5	NIC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	59	4	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	15.1079449297381	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAACAAAAA	3735	False	NA	NA	False	ATTAAA	-32	NA	97205174	97121795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
ES.22184.16	chr3	-	4866	4	ISM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	0	10820	0	2	intron_retention	FALSE	canonical	3	31	junction_3	6.12825877028341	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAAAACAAA	NA	False	NA	NA	False	ATTAAA	-30	NA	97134680	97121797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_97122745_97123628_97123942_97129094_97129178_97131157
ES.22184.17	chr3	-	8756	3	NIC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-29	-30	intron_retention	FALSE	canonical	3	19	junction_2	13.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACTAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-24	NA	97134709	97121829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97122745_97123628_97131294_97134533
ES.22184.18	chr3	-	10030	1	Intergenic	novelGene_18308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTGATGTTATGACTT	6656	False	NA	NA	False	NA	NA	NA	97202253	97192223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97192200_97202300
ES.22184.3	chr3	-	5856	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	13.392461487395	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCCTTTTTGTGCCTT	3715	False	NA	-8	True	AATAAA	-22	NA	97205194	97110976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
ES.22184.5	chr3	-	6117	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.0279850729776	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCCTTTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-21	NA	97134675	97110977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121211_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.6	chr3	-	6155	10	FSM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-53	0	-53	0	multi-exon	FALSE	canonical	3	19	junction_9	9.10162107389884	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCCTTTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-21	NA	97134733	97110977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.7	chr3	-	6383	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-147	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	10.381607668265	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTGCCTTTTTGTGCC	NA	False	NA	-10	True	AATAAA	-20	NA	97134998	97110978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113258_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.8	chr3	-	5931	10	NNC	ENSMUSG00000038256.16	novel	6102	10	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	11.7041725175677	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAACTGCCTTTTTGTGC	NA	False	NA	-11	True	AATAAA	-19	NA	97134733	97110979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ES.22184.9	chr3	-	4642	6	NNC	ENSMUSG00000038256.16	novel	4652	7	NA	NA	-1159	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.26498785752038	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAACTGCCTTTTTGTGC	NA	False	NA	-11	True	AATAAA	-19	NA	97122484	97110979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97113258_97114462_97114648_97116200_97118033_97120187_97120288_97121000_97121191_97122427
ES.22185.1	chr3	-	172	1	Intergenic	novelGene_18310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAATATATTTATCAGT	NA	False	NA	NA	False	NA	NA	NA	97267503	97267331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97267300_97267500
ES.22186.1	chr3	-	184	1	Intergenic	novelGene_18311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACATAAT	NA	False	NA	NA	False	NA	NA	NA	97273702	97273518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97273500_97273700
ES.22187.1	chr3	+	2127	3	Antisense	novelGene_ENSMUSG00000028089.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGCTGGGGCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	97453822	97481709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_97454027_97454151_97454192_97479826
ES.22187.2	chr3	+	4255	1	Antisense	novelGene_ENSMUSG00000028089.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATCAGGGGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	97464772	97469027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_97464800_97469000
ES.22188.1	chr3	+	3587	2	Antisense	novelGene_ENSMUSG00000028089.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTATCACTAATTAAATA	NA	False	NA	NA	False	NA	NA	NA	97497888	97502033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_97497963_97498520
ES.22189.1	chr3	-	3634	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	4	654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGTAAGTGCATTATT	NA	False	NA	NA	False	NA	NA	NA	97517515	97467403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.11	chr3	-	3978	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_15	69.8628718396117	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517495	97468057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.12	chr3	-	2928	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.2112884213731	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517487	97468057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480002_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.13	chr3	-	2999	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	87.8002051994063	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517519	97468057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478399_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.15	chr3	-	2962	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	88.2328928939188	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517500	97468057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497312_97497865_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.2	chr3	-	3023	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-31	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTTTTCTTACCC	NA	False	NA	0	True	AATAGA	-21	NA	97517550	97468049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.21	chr3	-	6974	21	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_15	71.5135476675574	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTATGTTGCTTTTT	NA	False	NA	-9	True	AATAGA	-12	NA	97517490	97468058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.23	chr3	-	4954	21	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_14	70.9947181133921	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGGTTATGTTGCTTT	NA	False	NA	-11	True	AATAGA	-10	NA	97517500	97468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.24	chr3	-	2780	21	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	5034	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.3382233963812	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGGTTATGTTGCTTT	NA	False	NA	-11	True	AATAGA	-10	NA	97512474	97468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505114_97510324_97510440_97510975_97511083_97512413
ES.22189.25	chr3	-	4004	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-21	-3	intron_retention	FALSE	canonical	0	0	junction_15	65.5522156034527	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGGTTATGTTGCTTT	NA	False	NA	-11	True	AATAGA	-10	NA	97517540	97468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.26	chr3	-	2789	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	69.8742310388122	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGGTTATGTTGCTT	NA	False	NA	-12	True	AATAGA	-9	NA	97517484	97468061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.28	chr3	-	3912	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	19	-533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.0481939910414	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTTGTGCAGTGTCAG	NA	False	NA	NA	False	TATAAA	-25	NA	97517489	97468590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.29	chr3	-	2679	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-9	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.0481939910414	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACGAGGAAAGTCGTG	NA	False	NA	NA	False	NA	NA	NA	97517528	97469862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.30	chr3	-	2038	16	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-9	-1374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.5978274034128	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGTTCTAAAAGCATT	NA	False	NA	NA	False	AATAAA	-27	NA	97517528	97479724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.31	chr3	-	2220	16	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	4	-2582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	95.1025177841727	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	97517515	97480932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97481429_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.32	chr3	-	6235	6	NNC	ENSMUSG00000028089.6	novel	2941	16	NA	NA	85	-24753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.001071423447	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAATGATGCCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	97517423	97503103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97507747_97508157_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.33	chr3	-	2493	6	ISM	ENSMUSG00000028089.6	ENSMUST00000197304.2	2941	16	-10	24753	1	-24753	5prime_fragment	FALSE	canonical	3	239	junction_1	20.0758561461274	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAATGATGCCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	97517518	97503103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.4	chr3	-	3466	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	12	6	intron_retention	FALSE	canonical	0	0	junction_15	69.7925335005565	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGCTTTTTTTCTTAC	NA	False	NA	-2	True	AATAGA	-19	NA	97517496	97468051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.5	chr3	-	3004	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	-8	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.8000287091201	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGCTTTTTTTCTTAC	NA	False	NA	-2	True	AATAGA	-19	NA	97517527	97468051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470010_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.7	chr3	-	2867	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	12	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	86.0970290584897	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGCTTTTTTTCTTA	NA	False	NA	-3	True	AATAGA	-18	NA	97517496	97468052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.22189.8	chr3	-	2877	22	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	90.2061886046907	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATGTTGCTTTTTTTCTT	NA	False	NA	-4	True	AATAGA	-17	NA	97517490	97468053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ES.2219.1	chr1	-	1066	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATGTCATGGTGTTT	4426	False	NA	NA	False	NA	NA	NA	192070100	192069034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192069000_192070100
ES.22190.1	chr3	-	178	1	Intergenic	novelGene_18312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAGATGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	97531400	97531222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97531200_97531400
ES.22191.1	chr3	+	5035	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	-22	-7	-3	7	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTTACTGATTCAATTG	NA	False	NA	NA	False	AATAAA	-27	NA	97565505	97581135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.10	chr3	+	2139	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	116	2751	114	13	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTTCCCTTTAAATGT	NA	False	NA	NA	False	NA	NA	NA	97565643	97578377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.11	chr3	+	4962	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	133	0	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565662	97581128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.12	chr3	+	4944	9	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	134	-5	intron_retention	FALSE	canonical	0	0	junction_2	34.6401140298354	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTGAGTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	97565663	97581123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97565686_97565904_97566083_97568890_97568970_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.13	chr3	+	4220	9	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	134	2	intron_retention	FALSE	canonical	0	0	junction_2	34.6401140298354	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATTGTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	97565663	97580399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97565686_97565904_97566083_97568890_97568970_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.14	chr3	+	3200	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	145	1014	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAAGAAACAAATCAAG	NA	False	NA	NA	False	AATAAA	-11	NA	97565674	97579378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.15	chr3	+	3333	7	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	150	-1009	intron_retention	FALSE	canonical	3	65	junction_1	8.35995746932297	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATCAAGGCAAAACTAT	NA	False	NA	NA	False	AATAAA	-21	NA	97565679	97579388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.16	chr3	+	4203	8	NNC	ENSMUSG00000038205.13	novel	3633	3	NA	NA	163	2	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATTGTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	97565692	97580399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.17	chr3	+	4129	7	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	185	-201	intron_retention	FALSE	canonical	1	3	junction_1	29.6535551550456	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTCAAAGCCAAGTTCT	NA	False	NA	NA	False	GATAAA	-24	NA	97565714	97580196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97566083_97569565_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.18	chr3	+	4858	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	466	-1	intron_retention	FALSE	canonical	0	0	junction_1	36.9920013417131	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGAGTTACTTACTGA	NA	False	NA	NA	False	AATAAA	-19	NA	97565995	97581127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97566083_97568890_97568970_97569565_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.19	chr3	+	6951	1	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	327	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTGAGTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	97574172	97581123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97574200_97581100
ES.22191.2	chr3	+	5219	7	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	65	junction_1	8.35995746932297	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAGTTACTTACTG	NA	False	NA	NA	False	AATAAA	-18	NA	97565531	97581126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.20	chr3	+	5210	1	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	515	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97575170	97580380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97575200_97580400
ES.22191.3	chr3	+	5061	1	NIC	ENSMUSG00000038205.13	novel	1878	7	NA	NA	60	-7465	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACGTTTTGTCAGTCA	NA	False	NA	NA	False	NA	NA	NA	97565589	97570650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97565600_97570600
ES.22191.4	chr3	+	7498	7	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	99	0	intron_retention	FALSE	canonical	3	53	junction_1	12.6545995151521	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565628	97581128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97574032_97574674_97574744_97577043
ES.22191.5	chr3	+	1066	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	102	3838	100	-825	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTCACGGAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	97565629	97577290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.6	chr3	+	4168	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	109	729	107	2	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATTGTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	97565636	97580399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.7	chr3	+	3159	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	112	1735	110	-1004	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGCAAAACTATTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	97565639	97579393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ES.22191.8	chr3	+	7699	6	NIC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	112	-5	intron_retention	FALSE	canonical	3	65	junction_1	8.61626369141521	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTGAGTTACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	97565641	97581123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97574032_97574674_97574744_97577043
ES.22191.9	chr3	+	4786	2	ISM	ENSMUSG00000038205.13	ENSMUST00000143927.8	1878	7	133	7469	112	-7469	intron_retention	FALSE	canonical	3	53	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTGAACGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	97565641	97570646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_97565686_97565904
ES.22192.1	chr3	+	3800	1	Antisense	novelGene_ENSMUSG00000038170.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAACAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	97616469	97620269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_97616500_97620300
ES.22193.1	chr3	-	4843	21	NNC	ENSMUSG00000038170.16	novel	8264	46	NA	NA	-30635	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	3.10805405358401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTTCCTTTGCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	97635218	97597142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551_97609684_97610482_97610735_97617536_97617761_97618712_97618765_97620383_97620620_97622429_97622959_97624283_97624401_97625464_97625658_97626597_97627034_97631404_97631638_97635143
ES.22193.2	chr3	-	4955	22	NNC	ENSMUSG00000038170.16	novel	8376	47	NA	NA	-30635	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.02596473625091	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTTCCTTTGCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	97635218	97597142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551_97609684_97610482_97610735_97616797_97616900_97617536_97617761_97618712_97618765_97620383_97620620_97622429_97622959_97624283_97624401_97625464_97625658_97626597_97627034_97631404_97631638_97635133
ES.22193.3	chr3	-	4929	22	NNC	ENSMUSG00000038170.16	novel	8376	47	NA	NA	-30626	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3.03344920164438	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTATTTTCCTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	97635209	97597146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551_97609684_97610482_97610735_97616797_97616897_97617536_97617761_97618712_97618765_97620383_97620620_97622429_97622959_97624283_97624401_97625464_97625658_97626597_97627034_97631404_97631638_97635143
ES.22193.4	chr3	-	4990	22	NNC	ENSMUSG00000038170.16	novel	8376	47	NA	NA	-30635	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3.03344920164438	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAAATTATTTTCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	97635218	97597148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97598170_97599636_97599684_97599911_97600051_97601251_97601396_97602207_97602435_97603194_97603315_97604305_97604531_97606424_97606550_97607110_97607301_97608873_97608994_97609551_97609684_97610482_97610735_97616797_97616951_97617536_97617761_97618712_97618765_97620383_97620620_97622429_97622959_97624283_97624401_97625464_97625658_97626597_97627034_97631404_97631638_97635143
ES.22194.1	chr3	+	5572	13	Antisense	novelGene_ENSMUSG00000038170.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-24	NA	97650842	97670052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_97650921_97653989_97654079_97654831_97654914_97655079_97655255_97659127_97659319_97660330_97660512_97661441_97661580_97661747_97661861_97662752_97662913_97664198_97664413_97664519_97664613_97664847_97664968_97666114
ES.22194.2	chr3	+	183	1	Intergenic	novelGene_18313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCTACTTTATCCCT	9332	False	NA	NA	False	NA	NA	NA	97667954	97668137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_97668000_97668100
ES.22195.1	chr3	-	5463	18	NIC	ENSMUSG00000038170.16	novel	8264	46	NA	NA	10	9768	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	19.0432034756739	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTACTGTGTGTCCAGA	NA	False	NA	NA	False	AATAAA	-13	NA	97675237	97636401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97638232_97648633_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.12	chr3	-	5552	17	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	19.7696697936511	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGTTCTTATAGAAGTT	NA	False	NA	-4	True	AATAAA	-20	NA	97675257	97646164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97674359
ES.22195.16	chr3	-	12297	17	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	-23	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	19.7696697936511	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGTTCTTATAGAAG	NA	False	NA	-6	True	AATAAA	-18	NA	97675270	97646166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97672411_97673789
ES.22195.17	chr3	-	6283	16	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	10	3	intron_retention	FALSE	canonical	3	63	junction_15	7.52949754853093	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGTTCTTATAGAAG	NA	False	NA	-6	True	AATAAA	-18	NA	97675237	97646166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97648762_97649804_97649918_97650480_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.19	chr3	-	4229	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	-7	1963	-7	0	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGAGTCCCGTGAGAG	NA	False	NA	NA	False	AATAAA	-35	NA	97675332	97648132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.2	chr3	-	8011	2	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	24360	3476	intron_retention	FALSE	canonical	3	90	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAGGAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97650887	97642693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97650619_97650801
ES.22195.20	chr3	-	4047	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	67	2071	-11	-108	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTGTGTGTATTA	NA	False	NA	NA	False	NA	NA	NA	97675258	97648240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.21	chr3	-	3359	13	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	53	7631	-25	208	5prime_fragment	FALSE	canonical	3	63	junction_12	8.07387763097757	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCCGCATCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	97675272	97653800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.22	chr3	-	3797	2	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	-37	-16100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTAGTTTTCTCTGGAT	NA	False	NA	NA	False	AATAAA	-18	NA	97675284	97670108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97672411_97673789
ES.22195.23	chr3	-	5183	1	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	34	-16100	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTAGTTTTCTCTGGAT	NA	False	NA	NA	False	AATAAA	-18	NA	97675291	97670108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97670100_97675300
ES.22195.24	chr3	-	2648	1	NIC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	34	-18635	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTACTTTCATTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	97675291	97672643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_97672600_97675300
ES.22195.3	chr3	-	5881	17	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	221	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.1600985122728	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTATAGAAGTTTGTGC	NA	False	NA	1	True	AATAAA	-25	NA	97675026	97646159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650816_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.4	chr3	-	4919	17	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	15	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	19.5476181413491	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTATAGAAGTTTGTGC	NA	False	NA	1	True	AATAAA	-25	NA	97675232	97646159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97674972
ES.22195.5	chr3	-	6203	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	-8	-10	-8	10	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTATAGAAGTTTGTGC	NA	False	NA	1	True	AATAAA	-25	NA	97675333	97646159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ES.22195.6	chr3	-	3746	10	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	13719	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.6170672501823	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTATAGAAGTTTGTGC	NA	False	NA	1	True	AATAAA	-25	NA	97661528	97646159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650832_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441
ES.22195.7	chr3	-	5386	22	NNC	ENSMUSG00000038170.16	novel	8264	46	NA	NA	-73	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.2704992695088	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTATAGAAGTTTGT	3521	False	NA	-1	True	AATAAA	-23	NA	97732010	97646161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97700054_97700173_97700460_97700637_97700800_97700925_97704047_97704125_97731530_97731642_97731887
ES.22195.8	chr3	-	7366	16	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	6289	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.3989106462957	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTTATAGAAGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	97668958	97646163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660332_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114
ES.22195.9	chr3	-	5432	18	NNC	ENSMUSG00000038170.16	novel	6185	17	NA	NA	333	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.2564194122717	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTTATAGAAGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	97674914	97646163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789_97673892_97674239
ES.22196.1	chr3	-	160	1	Intergenic	novelGene_18314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAAGTTTTTGTCCGT	3096	False	NA	NA	False	NA	NA	NA	97776168	97776008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97776000_97776200
ES.22197.1	chr3	+	2832	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	-21	-1	-21	1	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTGTGAAGTTCTGTC	NA	False	NA	19	True	AATAAA	-18	NA	97808484	97830593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ES.22197.10	chr3	+	1986	3	ISM	ENSMUSG00000027879.10	ENSMUST00000130778.2	1355	5	10421	0	4683	0	3prime_fragment	FALSE	canonical	3	330	junction_2	9	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCCTTGAAATTATAT	NA	False	NA	-25	True	ATTAAA	-11	NA	97818952	97829167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_97820056_97821815_97821963_97828431
ES.22197.11	chr3	+	3238	1	Intergenic	novelGene_18315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGCTGTAGTAATGTAT	NA	False	NA	NA	False	NA	NA	NA	97822603	97825841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_97822600_97825800
ES.22197.12	chr3	+	5017	1	NIC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	11305	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTGTGAAGTTCTG	NA	False	NA	17	True	AATAAA	-16	NA	97825574	97830591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97825600_97830600
ES.22197.2	chr3	+	7886	4	FSM	ENSMUSG00000027879.10	ENSMUST00000122288.2	1177	4	-35	-6674	2	34	multi-exon	FALSE	canonical	3	341	junction_2	4.18993502999218	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATGAATTTTTTTTT	NA	False	NA	9	True	ATTAAA	-45	NA	97808507	97829201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815
ES.22197.3	chr3	+	1432	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	16	1362	-10	63	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTTGTTGTTTGTTTT	NA	False	NA	38	True	ACTAAA	-27	NA	97808521	97829230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ES.22197.4	chr3	+	1381	5	NNC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	146.787261027652	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTGAAATTATATAGTAT	NA	False	NA	-20	True	ATTAAA	-16	NA	97808528	97829172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_97808737_97814522_97814647_97819894_97820056_97821815_97821963_97828431
ES.22197.5	chr3	+	3109	4	NIC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	330	junction_3	8.5764535535124	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCCTTGAAATTATATA	NA	False	NA	-24	True	ATTAAA	-12	NA	97808542	97829168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97808737_97814536_97814647_97819894_97821963_97828431
ES.22197.6	chr3	+	2648	4	NIC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	159.504092598139	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTGTGAAGTTCTG	NA	False	NA	17	True	AATAAA	-16	NA	97808556	97830591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97808737_97819894_97820056_97821815_97821963_97828431
ES.22197.8	chr3	+	5386	4	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	3222	2	-2542	-2	3prime_fragment	FALSE	canonical	3	330	junction_3	7.40870359029762	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCAGTGTGAAGTTCT	NA	False	NA	16	True	AATAAA	-15	NA	97811727	97830590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_97814647_97819894_97820056_97821815_97821963_97828431
ES.22197.9	chr3	+	4719	2	NIC	ENSMUSG00000027879.10	novel	2810	5	NA	NA	3712	2	intron_retention	FALSE	canonical	3	330	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCTTGAAATTATATAG	NA	False	NA	-23	True	ATTAAA	-13	NA	97817981	97829169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97821963_97828431
ES.22198.1	chr3	-	1602	1	Antisense	novelGene_ENSMUSG00000027879.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAATTGGGAACGCATA	NA	False	NA	NA	False	AAAAAG	-5	NA	97831173	97829571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_97829600_97831200
ES.22199.1	chr3	-	175	1	Intergenic	novelGene_18316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGGAGCAAGTACA	NA	False	NA	NA	False	NA	NA	NA	97833610	97833435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97833400_97833600
ES.222.1	chr1	+	3685	1	Antisense	novelGene_ENSMUSG00000026134.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTTATATCCAGTACT	NA	False	NA	NA	False	NA	NA	NA	33656844	33660529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_33656800_33660500
ES.222.2	chr1	+	3387	2	Antisense	novelGene_ENSMUSG00000026134.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTATGTATGTAGGCT	NA	False	NA	NA	False	AAAAAG	-14	NA	33656844	33661957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_33659020_33660745
ES.2220.1	chr1	+	5658	5	NNC	ENSMUSG00000058248.13	novel	5165	3	NA	NA	-31097	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGTGTTTGCCTTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	192085950	192192466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_192086064_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ES.2220.2	chr1	+	213	1	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGATGGCATC	NA	False	NA	NA	False	NA	NA	NA	192124588	192124801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_192124600_192124800
ES.2220.3	chr1	+	3001	1	ISM	ENSMUSG00000058248.13	ENSMUST00000078470.12	7242	11	315546	839	71580	-839	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCCTCCACCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	192188627	192191628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_192188600_192191600
ES.22200.1	chr3	-	557	1	Intergenic	novelGene_18317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATACTGAA	NA	False	NA	NA	False	NA	NA	NA	97834224	97833667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97833700_97834200
ES.22201.1	chr3	-	221	1	Intergenic	novelGene_18318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACTAACTTACTAAAGT	NA	False	NA	NA	False	NA	NA	NA	97878231	97878010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97878000_97878200
ES.22202.1	chr3	-	186	1	Intergenic	novelGene_18319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGGAGGAGA	NA	False	NA	1	True	NA	NA	NA	97905523	97905337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97905300_97905500
ES.22203.1	chr3	+	177	1	Intergenic	novelGene_18320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCAAGAAAG	7227	False	NA	NA	False	NA	NA	NA	97908451	97908628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_97908500_97908600
ES.22204.1	chr3	+	9538	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-80	1042	-69	-1042	multi-exon	FALSE	canonical	2	4	junction_15	4.33979175423846	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTCATGTGGTGACATC	NA	False	NA	NA	False	NA	NA	NA	97920773	98056635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ES.22204.2	chr3	+	9365	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-77	1212	-66	-1212	multi-exon	FALSE	canonical	2	4	junction_15	4.33979175423846	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCTTCGCCTCATT	NA	False	NA	NA	False	NA	NA	NA	97920776	98056465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ES.22204.3	chr3	+	9196	33	NIC	ENSMUSG00000027878.12	novel	10500	34	NA	NA	-26	-1218	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.68208020008201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAAGTGCCCTTCGC	NA	False	NA	NA	False	NA	NA	NA	97920816	98056459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ES.22204.4	chr3	+	9023	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-20	1497	-9	-1497	multi-exon	FALSE	canonical	2	4	junction_15	4.33979175423846	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGTGTGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	97920833	98056180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ES.22204.5	chr3	+	4391	23	ISM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	-11	18600	0	-18600	5prime_fragment	FALSE	canonical	2	4	junction_15	4.73600591913858	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAAGCTTGTTGTGCAA	NA	False	NA	NA	False	ATTAAA	-28	NA	97920842	98039077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513
ES.22204.6	chr3	+	3064	1	Intergenic	novelGene_18321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGACAATTAACATCTC	4675	False	NA	NA	False	NA	NA	NA	97926890	97929954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_97926900_97930000
ES.22204.7	chr3	+	1697	1	FSM	ENSMUSG00000106427.2	ENSMUST00000200084.2	3063	1	1627	-261	1627	261	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTCTTTTTTCAGCG	NA	False	NA	NA	False	NA	NA	NA	98030530	98032227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_98030500_98032200
ES.22205.1	chr3	-	183	1	Intergenic	novelGene_18322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGTGAACTTCTG	NA	False	NA	-5	True	NA	NA	NA	97957572	97957389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_97957400_97957600
ES.22206.1	chr3	-	3503	1	Antisense	novelGene_ENSMUSG00000027878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAAACAGGGCTCTGTG	8748	False	NA	NA	False	NA	NA	NA	98060597	98057094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_98057100_98060600
ES.22207.1	chr3	-	327	1	Intergenic	novelGene_18323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTCTTTATAGGCTT	NA	False	NA	NA	False	NA	NA	NA	98101507	98101180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_98101200_98101500
ES.22208.1	chr3	-	171	1	Intergenic	novelGene_18324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCATTTGTAATTAT	NA	False	NA	NA	False	NA	NA	NA	98147691	98147520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_98147500_98147700
ES.22209.1	chr3	+	1408	1	Antisense	novelGene_ENSMUSG00000053398.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGGCAGAGCAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	98220932	98222340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_98220900_98222300
ES.2221.1	chr1	-	176	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAAATTGCACACATGC	1994	False	NA	NA	False	NA	NA	NA	192097796	192097620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192097600_192097800
ES.22210.1	chr3	+	2203	1	Intergenic	novelGene_18325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGGCACAGCTCCAAT	2010	False	NA	NA	False	NA	NA	NA	98224166	98226369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_98224200_98226400
ES.22211.1	chr3	+	2060	1	Antisense	novelGene_ENSMUSG00000053398.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98235782	98237842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_98235800_98237800
ES.22212.1	chr3	+	3064	1	Antisense	novelGene_ENSMUSG00000053398.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98239907	98242971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_98239900_98243000
ES.22213.1	chr3	-	1894	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	-1	0	-1	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247307	98220485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.13	chr3	-	1844	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	545.473484519687	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGTGTGATCA	NA	False	NA	-3	True	AGTAAA	-15	NA	98247294	98220486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241939_98247010
ES.22213.14	chr3	-	1800	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	67	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	545.576501517674	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGTGTGATCA	NA	False	NA	-3	True	AGTAAA	-15	NA	98247239	98220486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227064_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.16	chr3	-	1845	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	535.135203430323	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGTGTGATCA	NA	False	NA	-3	True	AGTAAA	-15	NA	98247272	98220486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223734_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.2	chr3	-	5566	10	NIC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	67	0	intron_retention	FALSE	canonical	3	1070	junction_1	239.624294405087	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247239	98220485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_98220774_98221483_98222512_98223721_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.21	chr3	-	1821	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	537.791105102411	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGGTGTCTGTGTGAT	NA	False	NA	-5	True	AGTAAA	-13	NA	98247261	98220488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240593_98241822_98241975_98247010
ES.22213.22	chr3	-	1844	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	535.135203430323	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGGTGTCTGTGTGAT	NA	False	NA	-5	True	AGTAAA	-13	NA	98247239	98220488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222533_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.23	chr3	-	4919	11	NIC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	52	-3	intron_retention	FALSE	canonical	3	1070	junction_1	246.818637869996	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGGTGTCTGTGTGAT	NA	False	NA	-5	True	AGTAAA	-13	NA	98247254	98220488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.7	chr3	-	1822	12	NNC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	547.009389980897	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGTGTGATCA	NA	False	NA	-3	True	AGTAAA	-15	NA	98247252	98220486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228655_98235371_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22213.9	chr3	-	2535	11	NIC	ENSMUSG00000053398.12	novel	1893	12	NA	NA	16	-1	intron_retention	FALSE	canonical	3	1070	junction_1	235.300573734957	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGTGTGATCA	NA	False	NA	-3	True	AGTAAA	-15	NA	98247290	98220486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_98220774_98221483_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ES.22214.1	chr3	+	5138	3	NNC	ENSMUSG00000050064.15	novel	5166	3	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCCTTCTTTATTATGT	2770	False	NA	NA	False	ATTAAA	-22	NA	98289777	98339266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_98289895_98332584_98332817_98334477
ES.22214.2	chr3	+	4893	3	NNC	ENSMUSG00000050064.15	novel	5166	3	NA	NA	1	-2	intron_retention	TRUE	canonical	0	0	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTGAACTATGTTTCT	2770	False	NA	NA	False	NA	NA	NA	98289777	98339021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_98289895_98332584_98332817_98334477
ES.22214.3	chr3	+	5181	3	FSM	ENSMUSG00000050064.15	ENSMUST00000056096.15	5166	3	-18	3	2	-3	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCTCCTTCTTTATTAT	2771	False	NA	NA	False	ATTAAA	-20	NA	98289778	98339264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_98289895_98332538_98332817_98334477
ES.22214.4	chr3	+	181	1	Intergenic	novelGene_18326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	953	False	NA	NA	False	NA	NA	NA	98292244	98292425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_98292200_98292400
ES.22215.1	chr3	-	157	1	Intergenic	novelGene_18327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTTTGAATGTGTC	9213	False	NA	-2	True	AATAAA	-15	NA	98326441	98326284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_98326300_98326400
ES.22216.1	chr3	+	886	1	FSM	ENSMUSG00000082185.2	ENSMUST00000119844.2	727	1	611	-770	611	770	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	98728964	98729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_98729000_98729800
ES.22217.1	chr3	-	232	1	Intergenic	novelGene_18328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCCCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98993476	98993244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_98993200_98993500
ES.22218.1	chr3	+	3399	2	NNC	ENSMUSG00000004233.15	novel	403	4	NA	NA	2	-49892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	99048389	99062951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_99048505_99059667
ES.22218.10	chr3	+	2292	4	NIC	ENSMUSG00000004233.15	novel	4410	6	NA	NA	46343	-851	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	19.6015872373189	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCAACGTTGTACTGT	NA	False	NA	3	True	NA	NA	NA	99094823	99125668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_99095055_99111851_99111933_99112540_99112627_99123774
ES.22218.11	chr3	+	2157	1	NIC	ENSMUSG00000004233.15	novel	4410	6	NA	NA	75030	-852	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTCAACGTTGTACTG	NA	False	NA	2	True	NA	NA	NA	99123510	99125667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_99123500_99125700
ES.22218.12	chr3	+	3330	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	-104	340	-104	-340	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGGATGTTTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	99160971	99261235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ES.22218.13	chr3	+	3577	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	-10	-1	-10	1	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTTGTTCATAT	NA	False	NA	NA	False	AATAAA	-16	NA	99161065	99261576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ES.22218.14	chr3	+	5291	1	NIC	ENSMUSG00000027868.12	novel	3566	8	NA	NA	36	-53979	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGATATTAATATGAGAG	NA	False	NA	NA	False	NA	NA	NA	99161111	99166402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_99161100_99166400
ES.22218.2	chr3	+	2551	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	14	1845	10	-845	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTTGTACTGTGACTTA	NA	False	NA	9	True	NA	NA	NA	99048397	99125674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ES.22218.3	chr3	+	8813	1	FSM	ENSMUSG00000105472.2	ENSMUST00000196770.2	4352	1	-3513	-948	-3513	948	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGAAAACATTCTAGAAA	NA	False	NA	NA	False	AAAACA	-36	NA	99048405	99057218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_99048400_99057200
ES.22218.4	chr3	+	1654	9	NNC	ENSMUSG00000004233.15	novel	3457	7	NA	NA	-3	656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3158651058723	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCATGTGATGATGATGT	NA	False	NA	NA	False	CATAAA	-18	NA	99048405	99124573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_99048505_99094796_99095032_99108282_99108349_99111851_99111933_99112540_99112627_99112715_99112767_99114027_99114146_99121971_99122091_99123774
ES.22218.5	chr3	+	5027	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	22	-639	-3	639	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGATTCCTGCTCCCCC	NA	False	NA	NA	False	AATAAA	-14	NA	99048405	99128158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ES.22218.6	chr3	+	2661	7	NNC	ENSMUSG00000004233.15	novel	3457	7	NA	NA	-3	-845	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	18.6815416922694	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTTGTACTGTGACTTA	NA	False	NA	9	True	NA	NA	NA	99048405	99125674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99114027_99114146_99121971_99122091_99123774
ES.22218.7	chr3	+	3884	12	Fusion	ENSMUSG00000027868.12_ENSMUSG00000004233.15	novel	3457	7	NA	NA	-3	1	multi-exon	FALSE	canonical	0	0	junction_5	17.1695482884598	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTTTGTTCATAT	NA	False	NA	NA	False	AATAAA	-16	NA	99048405	99261576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ES.22218.8	chr3	+	2441	12	Fusion	ENSMUSG00000027868.12_ENSMUSG00000004233.15	novel	1840	9	NA	NA	-2	-1440	multi-exon	FALSE	canonical	0	0	junction_5	16.7060141593053	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATCTCAGTGGTCAT	NA	False	NA	NA	False	AATAGA	-29	NA	99048406	99260135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99114027_99114146_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ES.22218.9	chr3	+	2582	7	NNC	ENSMUSG00000004233.15	novel	3457	7	NA	NA	5	-849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2786583212283	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAACGTTGTACTGTGA	NA	False	NA	5	True	NA	NA	NA	99048416	99125670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_99048505_99073438_99073493_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ES.22219.1	chr3	-	4124	1	Intergenic	novelGene_18329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCATT	NA	False	NA	NA	False	AATGAA	-17	NA	99099520	99095396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_99095400_99099500
ES.2222.1	chr1	-	2440	13	NNC	ENSMUSG00000037375.17	novel	673	3	NA	NA	2	20288	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.14452781524708	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAGCATTCATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	192453529	192158730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192159214_192170460_192170729_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ES.2222.2	chr1	-	2668	12	NNC	ENSMUSG00000037375.17	novel	2839	12	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.07457325757953	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTCTTGATACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	192453518	192195132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192196123_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ES.2222.3	chr1	-	2854	12	FSM	ENSMUSG00000037375.17	ENSMUST00000044190.12	2839	12	-12	-3	-12	3	multi-exon	FALSE	canonical	3	12	junction_1	5.12327374676559	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTCTTGATACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	192453543	192195132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ES.2222.4	chr1	-	2785	13	NNC	ENSMUSG00000037375.17	novel	2839	12	NA	NA	-7	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.87992248018343	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGTCTTGATACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	192453538	192195132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192195961_192196024_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ES.2222.5	chr1	-	2604	13	NNC	ENSMUSG00000037375.17	novel	2839	12	NA	NA	-60	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.87992248018343	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATGTGTCTTGATAC	NA	False	NA	NA	False	AATAAA	-14	NA	192453360	192195135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192195948_192196011_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ES.2222.7	chr1	-	2663	11	NIC	ENSMUSG00000037375.17	novel	2839	12	NA	NA	35	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	7.21387551874857	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACATGTGTCTTGATA	NA	False	NA	NA	False	AATAAA	-13	NA	192453486	192195136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192453287
ES.2222.8	chr1	-	3864	1	Genic_Genomic	ENSMUSG00000037375.17	novel	NA	NA	NA	NA	143814	3119	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAACAAAAAGTAGGACG	NA	False	NA	NA	False	NA	NA	NA	192226200	192222336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_192222300_192226200
ES.2222.9	chr1	-	1340	1	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGACACAAATGTTCGGC	NA	False	NA	NA	False	NA	NA	NA	192394608	192393268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192393300_192394600
ES.22220.1	chr3	+	1657	1	Intergenic	novelGene_18330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99797045	99798702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_99797000_99798700
ES.22221.1	chr3	-	172	1	Intergenic	novelGene_18331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATGATAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100028025	100027853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100027900_100028000
ES.22222.1	chr3	-	89	1	Intergenic	novelGene_18332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGGCTGTAAGAGATC	NA	False	NA	NA	False	AAAACA	-6	NA	100032932	100032843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100032800_100032900
ES.22223.1	chr3	+	229	1	Intergenic	novelGene_18333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGAGAATTTCATATAT	NA	False	NA	NA	False	NA	NA	NA	100066098	100066327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100066100_100066300
ES.22224.1	chr3	+	2602	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	79	327	-58	-1	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCTTCTCAGAGTC	NA	False	NA	21	True	AGTAAA	-32	NA	100069775	100113970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.10	chr3	+	3120	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	99	-211	-38	211	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCCATGTGGCTGTC	NA	False	NA	NA	False	TTTAAA	-31	NA	100069795	100114508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.11	chr3	+	2866	14	NNC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-31	6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	26.8632301872778	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGTGTTCTATGGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	100069802	100114303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_100069940_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.12	chr3	+	2043	13	FSM	ENSMUSG00000027865.11	ENSMUST00000106997.2	2014	13	-29	0	-29	0	multi-exon	FALSE	canonical	3	84	junction_11	11.971029845237	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100069804	100109786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
ES.22224.13	chr3	+	2517	14	NIC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_12	27.3565110755164	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCTTCTCAGAGTC	NA	False	NA	21	True	AGTAAA	-32	NA	100069823	100113970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109326_100109434_100113087
ES.22224.14	chr3	+	4615	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	148	-1755	11	1755	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGGTGTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	100069844	100116052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.15	chr3	+	1614	4	ISM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	32044	0	-155	0	3prime_fragment	FALSE	canonical	3	84	junction_1	3.09120616516523	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATAAGGTGTTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	100101740	100114297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.16	chr3	+	6636	3	NIC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-130	-3	intron_retention	FALSE	canonical	3	84	junction_1	3.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTCTTCTCAGAG	NA	False	NA	19	True	AGTAAA	-30	NA	100101765	100113968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_100101946_100103858_100109434_100113087
ES.22224.17	chr3	+	4655	1	Genic_Genomic	ENSMUSG00000027865.11	novel	NA	NA	NA	NA	5356	3716	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	100113358	100118013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_100113400_100118000
ES.22224.2	chr3	+	2728	15	NIC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-56	-19	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	34.9877529593265	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCATCCCTGACCACAT	NA	False	NA	3	True	AGTAAA	-14	NA	100069777	100113952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_100069982_100076255_100076402_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.3	chr3	+	2317	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	85	606	-52	-280	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTGAAATGTGTATG	NA	False	NA	NA	False	AATATA	-17	NA	100069781	100113691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.4	chr3	+	2931	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	85	-8	-52	8	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTATGGTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	100069781	100114305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.5	chr3	+	5969	13	NNC	ENSMUSG00000027865.11	novel	2014	13	NA	NA	-49	-204	intron_retention	FALSE	canonical	1	6	junction_12	35.9979744800547	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGAGCTGTGCGTGCT	NA	False	NA	NA	False	NA	NA	NA	100069784	100113767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093923_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109326
ES.22224.6	chr3	+	2537	14	NNC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	-48	-18	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	26.3712682095922	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCATCCCTGACCACATT	NA	False	NA	4	True	AGTAAA	-15	NA	100069785	100113953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093923_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.7	chr3	+	2512	11	ISM	ENSMUSG00000027865.11	ENSMUST00000106997.2	2014	13	-47	6838	-47	-6838	5prime_fragment	FALSE	canonical	3	85	junction_7	11.6034477634882	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTTGGTTGCTATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100069786	100102948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805
ES.22224.8	chr3	+	3959	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	90	-1041	-47	1041	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATCTCTATTTGCTTA	NA	False	NA	NA	False	AATGAA	-20	NA	100069786	100115338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22224.9	chr3	+	4801	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	90	-1883	-47	1883	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGCCTATATCTTCC	NA	False	NA	NA	False	TATAAA	-22	NA	100069786	100116180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ES.22225.1	chr3	-	3756	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	-307	-17	-307	17	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGGGAGGGGTCTGGT	NA	False	NA	2	True	ATTAAA	-32	NA	100070030	100045478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.10	chr3	-	3346	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	169.369178539229	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGGTTCCCTGAATA	NA	False	NA	-16	True	ATTAAA	-14	NA	100069718	100045496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062310_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.11	chr3	-	3365	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	169.974419411975	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGGTTCCCTGAATA	NA	False	NA	-16	True	ATTAAA	-14	NA	100069718	100045496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051014_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.12	chr3	-	3381	26	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.804818628585	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGGTTCCCTGAATA	NA	False	NA	-16	True	ATTAAA	-14	NA	100069705	100045496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050356_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.16	chr3	-	5497	21	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	2532	-2	intron_retention	FALSE	canonical	3	562	junction_9	50.3978174130587	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGGTTCCCTGAAT	NA	False	NA	-17	True	ATTAAA	-13	NA	100067116	100045497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100050337_100050718_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081
ES.22225.17	chr3	-	3329	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	169.496421738775	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGGTTCCCTGAAT	NA	False	NA	-17	True	ATTAAA	-13	NA	100069723	100045497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.18	chr3	-	4618	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	-2	intron_retention	FALSE	canonical	3	79	junction_24	121.663180954634	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGGTTCCCTGAAT	NA	False	NA	-17	True	ATTAAA	-13	NA	100069719	100045497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.19	chr3	-	4108	24	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	3	junction_16	141.122089817309	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGGTTCCCTGAAT	NA	False	NA	-17	True	ATTAAA	-13	NA	100069718	100045497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100050337_100050718_100050770_100051008_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.2	chr3	-	3402	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGTTCCCTGAATATT	NA	False	NA	-14	True	ATTAAA	-16	NA	100069747	100045494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.20	chr3	-	3366	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	169.703191121803	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069718	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051969_100052946_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.21	chr3	-	5442	23	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-3	intron_retention	FALSE	canonical	3	562	junction_9	52.5336570587556	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069713	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100050337_100050718_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.22	chr3	-	4637	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_25	136.495778689306	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069663	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068133
ES.22225.24	chr3	-	2567	21	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	200.436342762484	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069667	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100068436_100068539_100069598
ES.22225.25	chr3	-	5290	25	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-3	intron_retention	FALSE	canonical	3	562	junction_11	50.9165814238239	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069723	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.26	chr3	-	5239	25	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-3	intron_retention	FALSE	canonical	2	3	junction_17	137.994162517437	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGGTTCCCTGAA	NA	False	NA	-18	True	ATTAAA	-12	NA	100069718	100045498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.27	chr3	-	5476	24	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	562	junction_10	51.8273270934204	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTGCTGGTTCCCTGA	NA	False	NA	-19	True	ATTAAA	-11	NA	100069718	100045499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.28	chr3	-	3417	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	133.581945242142	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTGCTGGTTCCCTGA	NA	False	NA	-19	True	ATTAAA	-11	NA	100069718	100045499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048876_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.29	chr3	-	5556	23	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_5	144.741747791434	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTGCTGGTTCCCTG	NA	False	NA	-20	True	ATTAAA	-10	NA	100069717	100045500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100050337_100050718_100050770_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.3	chr3	-	3707	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	134.128575822123	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069667	100045495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069328
ES.22225.31	chr3	-	2968	13	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5081	-7	intron_retention	FALSE	canonical	3	562	junction_11	43.8813900063442	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100055979	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420
ES.22225.32	chr3	-	3417	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	134.153383026724	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069717	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059323_100060118_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.33	chr3	-	3441	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	132.342996184359	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069718	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064780_100067081_100067292_100068335_100068539_100069659
ES.22225.36	chr3	-	4709	23	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	-7	intron_retention	FALSE	canonical	3	79	junction_21	129.566991830099	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069719	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100050337_100050718_100050770_100051008_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.37	chr3	-	5641	23	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	79	junction_21	129.438432666808	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069717	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.38	chr3	-	3355	26	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.804818628585	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069679	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050983_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.39	chr3	-	3814	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	10	-7	intron_retention	FALSE	canonical	3	562	junction_12	50.0285678387859	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069703	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.4	chr3	-	6276	22	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_14	147.91261132699	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069719	100045495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060178_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.40	chr3	-	3415	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	131.374887047508	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069718	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057268_100058274_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.43	chr3	-	6847	19	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-3	-7	intron_retention	FALSE	canonical	0	0	junction_9	155.608483059247	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069716	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058274_100058510_100059223_100059329_100060122_100060221_100060861_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.44	chr3	-	4646	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	16	-7	intron_retention	FALSE	canonical	3	562	junction_12	50.8205627674468	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069697	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.45	chr3	-	1289	9	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-225	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	220.780433915689	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100051123	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048908_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008
ES.22225.46	chr3	-	3396	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	133.877543843477	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069704	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068345_100068539_100069659
ES.22225.48	chr3	-	3372	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	136.238825596817	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069718	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.49	chr3	-	3385	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	23	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	133.972315651207	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069690	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052957_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.52	chr3	-	6690	20	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-7	intron_retention	FALSE	canonical	3	79	junction_18	138.569562118477	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069723	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100050337_100050718_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.53	chr3	-	3583	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-308	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	170.035503602063	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100070031	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069754
ES.22225.54	chr3	-	3548	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	562	junction_12	51.3753871031645	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069718	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.57	chr3	-	5948	22	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	-7	intron_retention	FALSE	canonical	2	3	junction_15	187.156233618635	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069719	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100050337_100050718_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100060861_100060964_100061177_100061292_100062238_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.58	chr3	-	3424	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-13	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_26	133.950070182046	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069661	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069598
ES.22225.59	chr3	-	3944	25	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	8	-7	intron_retention	FALSE	canonical	3	562	junction_11	51.0057016148413	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069705	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100050337_100050718_100050770_100051008_100051144_100051634_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.60	chr3	-	5526	24	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	562	junction_10	51.8462901969212	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGACTTGCTGGTTCCC	NA	False	NA	-22	True	ATTAAA	-8	NA	100069724	100045502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100049862_100050270_100050337_100050718_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.62	chr3	-	4616	24	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	9	-12	intron_retention	FALSE	canonical	3	562	junction_10	50.8802664329437	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAAAATGACTTGCTGG	NA	False	NA	-27	True	ATTAAA	-3	NA	100069704	100045507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.63	chr3	-	4616	24	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-4	-17	intron_retention	FALSE	canonical	3	79	junction_22	126.982099865297	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCACTTAAAATGACTT	NA	False	NA	-32	True	AATACA	-15	NA	100069717	100045512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100049577_100049768_100050337_100050718_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.64	chr3	-	3257	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	-1	176	-1	-176	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTCATTGTCCTCT	NA	False	NA	34	True	NA	NA	NA	100069724	100045671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.65	chr3	-	3148	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-5	-176	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	172.782573195331	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTCATTGTCCTCT	NA	False	NA	34	True	NA	NA	NA	100069718	100045671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.66	chr3	-	5304	24	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	4	-177	intron_retention	FALSE	canonical	3	562	junction_10	51.8273270934204	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGTGTCATTGTCCTC	NA	False	NA	33	True	NA	NA	NA	100069719	100045672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22225.68	chr3	-	3196	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	-181	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCGTGTGTGTCATTGT	NA	False	NA	29	True	NA	NA	NA	100069723	100045676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.7	chr3	-	4319	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_25	133.698371111505	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069704	100045495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100068198_100068335_100068539_100069659
ES.22225.70	chr3	-	3519	28	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-17	-239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	201.837654954362	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTCCGAAGTGTCT	NA	False	NA	-29	True	TTTAAA	-37	NA	100069665	100045734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100068656_100068765_100069328
ES.22225.72	chr3	-	3152	27	NNC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	-21	-241	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	179.239637449801	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGATTCCGAAGTGT	NA	False	NA	-31	True	TTTAAA	-35	NA	100069669	100045736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060175_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069598
ES.22225.73	chr3	-	3050	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	3	231	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGGATTTAGTTTAAAAA	NA	False	NA	-114	True	AAGAAA	-40	NA	100069720	100045819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
ES.22225.74	chr3	-	665	3	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	19	21379	9	-2235	5prime_fragment	FALSE	canonical	3	579	junction_1	15	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACACAGAGGTACTCTG	NA	False	NA	NA	False	GATAAA	-18	NA	100069704	100066874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_100067292_100068335_100068539_100069659
ES.22225.9	chr3	-	3368	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	135.966431151222	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGGTTCCCTGAATA	NA	False	NA	-16	True	ATTAAA	-14	NA	100069704	100045496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ES.22226.1	chr3	-	1545	1	Intergenic	novelGene_18334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAAGACAAGTCTACC	NA	False	NA	NA	False	NA	NA	NA	100072134	100070589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100070600_100072100
ES.22227.1	chr3	-	134	1	Intergenic	novelGene_18335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100448835	100448701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100448700_100448800
ES.22228.1	chr3	+	3354	13	Antisense	novelGene_ENSMUSG00000105561.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100473417	100572536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524371_100527342_100527473_100539821_100539915_100551856_100551940_100554308_100554426_100559853_100559952_100563334_100563590_100572319
ES.22228.2	chr3	+	3345	13	Antisense	novelGene_ENSMUSG00000105561.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGTGCTTCCATGCCCT	NA	False	NA	NA	False	NA	NA	NA	100473417	100572563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499260_100524275_100524371_100527342_100527473_100539821_100539915_100551856_100551940_100554308_100554430_100559856_100559952_100563334_100563590_100572352
ES.22228.3	chr3	+	3319	13	Antisense	novelGene_ENSMUSG00000105561.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100473418	100572536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524382_100527354_100527473_100539821_100539915_100551856_100551940_100554308_100554426_100559853_100559945_100563327_100563590_100572352
ES.22228.5	chr3	+	3521	13	Intergenic	novelGene_18336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAATAAA	NA	False	NA	NA	False	NA	NA	NA	100473418	100592266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524371_100527342_100527473_100539827_100539915_100551856_100551940_100554308_100554426_100559853_100559945_100563327_100563590_100591875
ES.22228.6	chr3	+	3465	12	Intergenic	novelGene_18337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATTTCCCTCCTCTCAA	NA	False	NA	NA	False	AATAAA	-1	NA	100473418	100592286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524371_100527342_100527473_100539821_100539915_100554307_100554426_100559853_100559952_100563334_100563590_100591875
ES.22228.7	chr3	+	3353	13	Antisense	novelGene_ENSMUSG00000105561.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100473418	100572536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524371_100527342_100527473_100539821_100539915_100551856_100551940_100554308_100554426_100559853_100559945_100563327_100563590_100572319
ES.22228.8	chr3	+	4035	13	Intergenic	novelGene_18338	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAGGAGCGGAACTTCC	NA	False	NA	NA	False	NA	NA	NA	100473421	100592780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100475059_100485791_100485910_100489303_100489476_100495036_100495253_100499144_100499267_100524278_100524371_100527342_100527473_100539822_100539914_100551856_100551940_100554308_100554426_100559853_100559954_100563337_100563590_100591875
ES.22228.9	chr3	+	195	1	Intergenic	novelGene_18339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGTGTAGAAATCCCCA	NA	False	NA	NA	False	NA	NA	NA	100575623	100575818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100575600_100575800
ES.22229.1	chr3	-	5716	13	NNC	ENSMUSG00000008763.17	novel	592	7	NA	NA	-435	20235	intron_retention	FALSE	canonical	2	2	junction_1	38.3010733821158	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAAAATTGTGGTAAT	NA	False	NA	NA	False	AATGAA	-37	NA	100593254	100449288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100452136_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.10	chr3	-	4118	13	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	4	-3230	combination_of_known_junctions	FALSE	canonical	1	5	junction_9	49.1440626005715	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGTGTCATGTTTGAT	NA	False	NA	-2	True	ATTAAA	-16	NA	100592771	100472753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100559854_100559952_100563334_100563591_100591876_100592004_100592457
ES.22229.11	chr3	-	4244	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-3	-3230	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGTGTCATGTTTGAT	NA	False	NA	-2	True	ATTAAA	-16	NA	100592778	100472753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
ES.22229.12	chr3	-	4415	15	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	6	-3230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.5282608686968	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGTGTCATGTTTGAT	NA	False	NA	-2	True	ATTAAA	-16	NA	100592769	100472753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100572320_100572501_100591876_100592004_100592457
ES.22229.13	chr3	-	5044	14	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-503	-3230	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	36.5505243245889	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGTGTCATGTTTGAT	NA	False	NA	-2	True	ATTAAA	-16	NA	100593322	100472753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592260_100592457
ES.22229.15	chr3	-	4653	14	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-16	-3232	intron_retention	FALSE	non_canonical	0	0	junction_1	37.337101810366	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCAGTGTCATGTTTG	NA	False	NA	-4	True	ATTAAA	-14	NA	100592791	100472755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100473608_100473663_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.17	chr3	-	4568	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-486	3887	-486	-3887	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTATTACTAGCAGATT	NA	False	NA	NA	False	NA	NA	NA	100593305	100473410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.2	chr3	-	7926	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	48	-5	4	5	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTCTCTTTTTTTTT	NA	False	NA	4	True	AATAAA	-20	NA	100592771	100469518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.20	chr3	-	4381	13	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-469	-3979	intron_retention	FALSE	canonical	1	4	junction_2	37.6150088247881	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTATGAAACACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	100593288	100473502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100475059_100485791_100485908_100489378_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.21	chr3	-	3502	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-13	-3982	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATATTTTATGAAACAC	NA	False	NA	NA	False	AATAAA	-12	NA	100592788	100473505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
ES.22229.22	chr3	-	4084	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-196	4081	-196	-4081	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCTGTCCCTTGAAT	NA	False	NA	NA	False	GATAAA	-13	NA	100593015	100473604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.23	chr3	-	3247	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-469	5191	-469	-5191	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAGAGACCTGATGTGT	NA	False	NA	NA	False	AAAACA	-16	NA	100593288	100474714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.24	chr3	-	3148	8	ISM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	49	53367	5	4458	5prime_fragment	FALSE	canonical	3	133	junction_7	4.89064079103534	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGAAAATGGTTTTCAT	NA	False	NA	NA	False	ATTAAA	-34	NA	100592770	100522890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.25	chr3	-	3663	6	ISM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-344	68568	-344	-10743	5prime_fragment	FALSE	canonical	3	133	junction_5	3.96988664825584	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100593163	100538091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.26	chr3	-	5244	1	Genic_Genomic	ENSMUSG00000008763.17	novel	NA	NA	NA	NA	-485	3849	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGAGAGTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	100593304	100588060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_100588100_100593300
ES.22229.3	chr3	-	6389	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-481	2061	-481	-2061	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAAGTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	100593300	100471584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.4	chr3	-	5668	14	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-5	-2062	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	37.337101810366	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTAGAAGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	100592780	100471585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592258_100592457
ES.22229.5	chr3	-	3894	14	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-503	-2064	intron_retention	FALSE	canonical	1	2	junction_1	36.8126554004616	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTGTAGAAGTCTGT	NA	False	NA	NA	False	AATAAA	-44	NA	100593322	100471587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100472432_100474945_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.22229.6	chr3	-	5391	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	0	-2080	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATGATTAAGATCAATA	NA	False	NA	NA	False	AATAAA	-28	NA	100592775	100471603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
ES.22229.7	chr3	-	3513	12	NNC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	-3476	-3229	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	39.2369365532357	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100563384	100472752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100475059_100485791_100485908_100489378_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334
ES.22229.8	chr3	-	4574	12	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	3	-3229	intron_retention	FALSE	canonical	1	5	junction_9	39.0369606593631	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100592772	100472752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100559854_100559952_100563334_100563591_100591876
ES.22229.9	chr3	-	5270	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	-530	3229	-530	-3229	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100593349	100472752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ES.2223.1	chr1	-	3224	2	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	192477296	192459905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192463021_192477187
ES.22230.1	chr3	-	180	1	Intergenic	novelGene_18340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100745686	100745506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100745500_100745700
ES.22231.1	chr3	+	177	1	Intergenic	novelGene_18341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100754599	100754776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100754600_100754800
ES.22232.1	chr3	+	177	1	Intergenic	novelGene_18342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAGAAGAAGAA	1753	False	NA	NA	False	NA	NA	NA	100787493	100787670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_100787500_100787700
ES.22233.1	chr3	+	2327	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	-24	2309	-24	0	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGACTTCAAGTGCT	4307	False	NA	7	True	ATTAAA	-18	NA	100829766	100839018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
ES.22233.2	chr3	+	1762	6	NNC	ENSMUSG00000033233.18	novel	1815	7	NA	NA	215	0	intron_retention	FALSE	canonical	0	0	junction_5	4.58693797647189	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGACTTCAAGTGCT	4983	False	NA	7	True	ATTAAA	-18	NA	100830442	100839018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837371_100838746
ES.22233.3	chr3	+	1242	2	ISM	ENSMUSG00000033233.18	ENSMUST00000094048.10	1815	7	6772	0	6062	0	3prime_fragment	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGACTTCAAGTGCT	NA	False	NA	7	True	ATTAAA	-18	NA	100836289	100839018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_100837260_100838746
ES.22234.1	chr3	-	5129	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	12	1692	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	56.7501405276276	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCCTTCTGGTATGC	NA	False	NA	NA	False	AATACA	-14	NA	100876967	100844483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100846129_100847220_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.10	chr3	-	3961	6	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-2757	0	intron_retention	FALSE	canonical	3	255	junction_1	24.265201420965	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100856430	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100853267_100854713_100854885_100855460_100855595_100856396
ES.22234.11	chr3	-	4561	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	52.8610372221199	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100877010	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.13	chr3	-	5504	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1931984608806	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100877009	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100848362_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.14	chr3	-	4401	21	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	165	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	60.3153380161299	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876814	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748
ES.22234.15	chr3	-	4621	23	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	58.1931984608806	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876987	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855388_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.16	chr3	-	4486	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	57.4951848504876	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876998	100846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870710_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.17	chr3	-	3569	6	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-2765	-1	intron_retention	FALSE	canonical	3	255	junction_1	23.9633052812003	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100856438	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100853267_100854713_100855595_100856396
ES.22234.18	chr3	-	6156	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5	junction_4	87.2136755710455	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876979	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100851545_100851615_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.19	chr3	-	5514	22	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	226	junction_13	22.5886010624648	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876978	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.2	chr3	-	5512	22	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	8	intron_retention	FALSE	canonical	3	28	junction_8	54.0698716514859	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTGTGTTCACCAAAC	NA	False	NA	1	True	AATAAA	-25	NA	100876978	100846167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.22	chr3	-	5177	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	8	-1	intron_retention	FALSE	canonical	1	5	junction_4	75.6205730894719	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876971	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100851545_100851615_100852030_100852182_100853207_100853267_100854713_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.24	chr3	-	3490	4	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-53	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	117.701128098058	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100853726	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849393_100850712_100852182_100853207
ES.22234.26	chr3	-	5112	22	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	28	junction_8	54.0841286379058	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876986	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.27	chr3	-	6465	22	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-1	intron_retention	FALSE	canonical	3	28	junction_9	54.0921779818567	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876978	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.28	chr3	-	4322	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	56.9387957813331	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876966	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870184_100870388_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.3	chr3	-	4589	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	-41	-7	-41	7	multi-exon	FALSE	canonical	3	226	junction_14	22.0712594988997	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTGTGTTCACCAAA	NA	False	NA	0	True	AATAAA	-24	NA	100877020	100846168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.30	chr3	-	5020	21	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_20	60.5561722700502	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876986	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876935
ES.22234.31	chr3	-	4506	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	73.9700771531948	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	100876978	100846176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861636_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.32	chr3	-	1450	6	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.919969788515	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100876987	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847153_100870620_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.33	chr3	-	6089	21	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-2	intron_retention	FALSE	canonical	3	226	junction_12	23.1330931783884	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100876978	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100852182_100853207_100853267_100854713_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.34	chr3	-	5827	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.7599003152153	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100876976	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100853481_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100867950_100868021_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.35	chr3	-	4665	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	75.5209256295201	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100876967	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100867863_100868002_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.38	chr3	-	4501	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.9387957813331	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100876989	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100846377_100846424_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.39	chr3	-	3976	4	ISM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	22382	2	-924	-2	intron_retention	FALSE	canonical	3	255	junction_1	14.6363322667334	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTGATGCTGTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	100854597	100846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030
ES.22234.4	chr3	-	4530	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.704156583887	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTGTGTTCACCAAA	NA	False	NA	0	True	AATAAA	-24	NA	100876987	100846168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857239_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861636_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.41	chr3	-	4235	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9387957813331	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876986	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100846911_100847220_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.43	chr3	-	4479	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	56.9387957813331	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876978	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870177_100870234_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.44	chr3	-	5131	22	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	226	junction_13	22.5781585305442	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876996	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.45	chr3	-	5533	22	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	58.0037921975542	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876978	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858490_100859833_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.46	chr3	-	4761	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	76.0357094497789	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876997	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866155_100866361_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.47	chr3	-	4529	22	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.5447963002638	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100877009	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852202_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.48	chr3	-	4534	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	58.2170525414296	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876978	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857647_100858313_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.49	chr3	-	4596	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	74.8433019633104	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGAGGTGATGCTGTGT	NA	False	NA	-10	True	AATAAA	-14	NA	100876986	100846178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100867950_100868002_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.5	chr3	-	4447	22	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-4	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	59.1390612998598	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGCTGTGTGTTCACCA	NA	False	NA	-2	True	AATAAA	-22	NA	100876983	100846170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876935
ES.22234.51	chr3	-	8387	21	NIC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	5	-4	intron_retention	FALSE	canonical	3	226	junction_13	23.0995129818791	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGAGGTGATGCTGTG	NA	False	NA	-11	True	AATAAA	-13	NA	100876974	100846179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100847429_100849142_100849218_100850972_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100874409_100876748_100876852_100876935
ES.22234.53	chr3	-	4602	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.235285046398	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGAGGTGATGCTGTG	NA	False	NA	-11	True	AATAAA	-13	NA	100876986	100846179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851057_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856537_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.55	chr3	-	2924	17	FSM	ENSMUSG00000033222.17	ENSMUST00000127357.2	4544	17	-7	1627	-7	-514	multi-exon	FALSE	canonical	3	226	junction_8	24.5750604017569	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTTTTTTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	100876986	100855292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.56	chr3	-	3562	10	ISM	ENSMUSG00000033222.17	ENSMUST00000127357.2	4544	17	-8	8129	-8	4281	5prime_fragment	FALSE	canonical	3	226	junction_1	16.7339383098548	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCTTCCGTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	100876987	100861794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.57	chr3	-	179	1	Intergenic	novelGene_18343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCACATTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	100862242	100862063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_100862100_100862200
ES.22234.6	chr3	-	4617	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	-4	3	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_4	74.0627384381157	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGATGCTGTGTGTTCAC	NA	False	NA	-4	True	AATAAA	-20	NA	100876983	100846172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100851545_100851615_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.8	chr3	-	4567	24	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.8666482718654	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATGCTGTGTGTTCA	NA	False	NA	-5	True	AATAAA	-19	NA	100876978	100846173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100851545_100851582_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22234.9	chr3	-	4518	25	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	87.2362294131413	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGATGCTGTGTGTTC	NA	False	NA	-6	True	AATAAA	-18	NA	100876964	100846174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100867950_100868002_100868566_100868750_100869016_100869132_100869868_100870184_100870243_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ES.22235.1	chr3	+	3550	1	Intergenic	novelGene_18344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGAAGTTTATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	101010158	101013708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_101010200_101013700
ES.22236.1	chr3	+	1185	1	Antisense	novelGene_ENSMUSG00000027864.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCCACACCAT	6171	False	NA	NA	False	NA	NA	NA	101017202	101018387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_101017200_101018400
ES.22237.1	chr3	-	4196	11	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-170	26392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.9030847105985	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCAGGTATTTGCCCAA	4611	False	NA	NA	False	NA	NA	NA	101017764	100921155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100921175_100949135_100950319_100950625_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.10	chr3	-	5573	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-79	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5586852908031	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGTGTGAGGAAGT	4702	False	NA	-4	True	ATTAAA	-17	NA	101017673	100947548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950319_100950725_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.11	chr3	-	5765	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-143	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8538328410674	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGACTTGTGTGAGGA	4638	False	NA	-7	True	ATTAAA	-14	NA	101017737	100947551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100948307_100948582_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.12	chr3	-	4561	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-244	1585	-244	-1585	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGTGCAGCTCTAGTCA	4537	False	NA	0	True	AATAAA	-20	NA	101017838	100949132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.13	chr3	-	4547	12	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-834	-1588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.9826026693522	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCACGTGCAGCTCTAG	3947	False	NA	-3	True	AATAAA	-17	NA	101018428	100949135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950319_100950449_100950557_100950736_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407_101018113_101018402
ES.22237.14	chr3	-	4049	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-143	-1589	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5586852908031	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATCACGTGCAGCTCTA	4638	False	NA	-4	True	AATAAA	-16	NA	101017737	100949136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950319_100950725_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.15	chr3	-	4130	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	98	-1590	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5586852908031	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATCACGTGCAGCTCT	4879	False	NA	-5	True	AATAAA	-15	NA	101017496	100949137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950557_100950640_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.16	chr3	-	4347	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-210	-1596	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.2639104842218	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGGCCATCACGTGC	4571	False	NA	-11	True	AATAAA	-9	NA	101017804	100949143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950557_100950725_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.17	chr3	-	3546	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-187	2543	-187	-2543	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTAAGCCTTTTGTTTC	4594	False	NA	NA	False	TTTAAA	-17	NA	101017781	100950090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.18	chr3	-	3291	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-190	2801	-190	-2801	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGTTGCTCACT	4591	False	NA	NA	False	NA	NA	NA	101017784	100950348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.19	chr3	-	3092	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-201	3011	-201	-3011	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGACTCGGCGCTCTC	4580	False	NA	-1	True	ACTAAA	-20	NA	101017795	100950558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.2	chr3	-	3523	11	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-126	3241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.4760686999098	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATACAAACATTGTACC	4655	False	NA	NA	False	NA	NA	NA	101017720	100944306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100944912_100946823_100946892_100950725_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.3	chr3	-	6136	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-230	-4	-230	4	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTGAGGAAGTTGATA	4551	False	NA	1	True	ATTAAA	-22	NA	101017824	100947543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.4	chr3	-	5917	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-180	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.2639104842218	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTGAGGAAGTTGATA	4601	False	NA	1	True	ATTAAA	-22	NA	101017774	100947543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950557_100950725_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.5	chr3	-	5741	10	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-143	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	30.9695190648985	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTGAGGAAGTTGAT	4638	False	NA	0	True	ATTAAA	-21	NA	101017737	100947544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950319_100950625_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.6	chr3	-	6055	9	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	31.3585614306524	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTGTGTGAGGAAGTT	4577	False	NA	-3	True	ATTAAA	-18	NA	101017798	100947547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963921_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ES.22237.7	chr3	-	3377	1	NIC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	29840	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGTGTGAGGAAGT	NA	False	NA	-4	True	ATTAAA	-17	NA	100950925	100947548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_100947500_100950900
ES.22237.8	chr3	-	3928	4	NNC	ENSMUSG00000027864.10	novel	5902	9	NA	NA	23252	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.8978113919839	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGTGTGAGGAAGT	NA	False	NA	-4	True	ATTAAA	-17	NA	100957513	100947548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_100950839_100950993_100951218_100952759_100953066_100957405
ES.22238.1	chr3	-	592	3	NNC	ENSMUSG00000027863.9	novel	968	2	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGTGAGCATGCCCACT	NA	False	NA	NA	False	AATAAA	-22	NA	101187628	101183223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101183590_101187103_101187227_101187525
ES.22239.1	chr3	-	1211	3	Intergenic	novelGene_18345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	101199583	101197831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_101198714_101199037_101199257_101199473
ES.2224.1	chr1	-	3346	4	FSM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	4	0	4	0	multi-exon	FALSE	canonical	2	5	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTTTTTTAAAATTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	192538060	192526795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192537750
ES.2224.10	chr1	-	5214	6	NIC	ENSMUSG00000016200.15	novel	7882	8	NA	NA	9	-1879	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.56504524214554	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTGAAAGTCTTCTGT	195	False	NA	NA	False	AGTAAA	-25	NA	192718016	192575419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192579929_192584059_192584250_192662653_192662870_192669025_192669191_192709277_192709326_192717930
ES.2224.11	chr1	-	6056	8	FSM	ENSMUSG00000016200.15	ENSMUST00000195354.6	7882	8	-58	1884	-58	-1884	multi-exon	FALSE	canonical	3	7	junction_1	6	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACCATTGTGAAAGTCT	70	False	NA	NA	False	AGTAAA	-20	NA	192718141	192575424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277_192709326_192717930
ES.2224.12	chr1	-	6084	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	-66	3256	-66	1497	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGATGAGTTTTCAGTA	62	False	NA	NA	False	AATACA	-21	NA	192718149	192576796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.2224.13	chr1	-	3654	8	NNC	ENSMUSG00000016200.15	novel	7882	8	NA	NA	-4	748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.99854212223765	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAATTGGACATTATAAG	182	False	NA	NA	False	AATAAA	-25	NA	192718029	192577545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192579760_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277_192709326_192717930
ES.2224.14	chr1	-	3714	7	ISM	ENSMUSG00000016200.15	ENSMUST00000195354.6	7882	8	8762	4011	8631	742	3prime_fragment	FALSE	canonical	3	7	junction_1	3.02305952453618	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGCTCAATTGGACAT	8890	False	NA	NA	False	AATAAA	-19	NA	192709321	192577551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277
ES.2224.15	chr1	-	1497	2	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGTTTTGGGTTTTT	NA	False	NA	NA	False	AATGAA	-18	NA	192604524	192602947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192603601_192603680
ES.2224.16	chr1	-	3359	7	ISM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	-73	38655	-73	175	5prime_fragment	FALSE	canonical	2	2	junction_3	7.41057802513857	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTGTGTTGTTTATTT	55	False	NA	NA	False	NA	NA	NA	192718156	192612195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.2224.17	chr1	-	3151	7	ISM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	-45	38835	-45	-5	5prime_fragment	FALSE	canonical	2	2	junction_3	7.41057802513857	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAAAATAGAGAAAA	83	False	NA	NA	False	NA	NA	NA	192718128	192612375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.2224.18	chr1	-	2646	6	ISM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	59	41422	1	-2592	5prime_fragment	FALSE	canonical	2	2	junction_2	8.11418511004032	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAATGGTTGTAGTTTC	187	False	NA	NA	False	AATAAA	-16	NA	192718024	192614962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.2224.19	chr1	-	2754	4	NNC	ENSMUSG00000016200.15	novel	9274	9	NA	NA	-6	-90710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTTGTACAACCTC	180	False	NA	NA	False	AATAAA	-17	NA	192718031	192703080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192705608_192709277_192709326_192713641_192713720_192717930
ES.2224.2	chr1	-	4473	10	Fusion	ENSMUSG00000016200.15_ENSMUSG00000016262.15	novel	3350	4	NA	NA	-4	-2	multi-exon	FALSE	canonical	0	0	junction_3	6.76227735764575	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGGTTTTTTAAAAT	182	False	NA	NA	False	ATTAAA	-12	NA	192718029	192526798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_192529524_192532058_192532175_192533259_192533452_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277_192709326_192717930
ES.2224.3	chr1	-	1999	5	NNC	ENSMUSG00000016262.15	novel	3350	4	NA	NA	65	1163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.77491721763537	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAAGTGGTTTCATGA	NA	False	NA	NA	False	AGTAAA	-19	NA	192537999	192528207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192529524_192531404_192531531_192532058_192532175_192533259_192533452_192537750
ES.2224.4	chr1	-	5295	1	Antisense	novelGene_ENSMUSG00000102162.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGCTTTGGTATTTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	192573276	192567981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_192568000_192573300
ES.2224.5	chr1	-	8219	9	NNC	ENSMUSG00000016200.15	novel	9274	9	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	6.74536878161602	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACGTTTCTTCACATTT	65	False	NA	NA	False	AATAAA	-18	NA	192718146	192573540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192705333_192705608_192709277_192709326_192717930
ES.2224.6	chr1	-	7843	8	FSM	ENSMUSG00000016200.15	ENSMUST00000195354.6	7882	8	36	3	-22	-3	multi-exon	FALSE	canonical	3	7	junction_1	6	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACGTTTCTTCACA	164	False	NA	NA	False	AATAAA	-15	NA	192718047	192573543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192669025_192669191_192709277_192709326_192717930
ES.2224.7	chr1	-	9230	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	41	3	-17	-3	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACGTTTCTTCACA	169	False	NA	NA	False	AATAAA	-15	NA	192718042	192573543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.2224.8	chr1	-	6887	5	FSM	ENSMUSG00000016200.15	ENSMUST00000195530.6	2078	5	-60	-4749	-5	-4	multi-exon	FALSE	canonical	0	0	junction_2	9.40744386111339	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTACGTTTCTTCAC	181	False	NA	NA	False	AATAAA	-14	NA	192718030	192573544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192669025_192669191_192709277_192709326_192717930
ES.2224.9	chr1	-	7366	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	52	1856	-6	-1856	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACTGAGTAGGTT	180	False	NA	NA	False	NA	NA	NA	192718031	192575396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ES.22240.1	chr3	-	199	1	FSM	ENSMUSG00000072381.4	ENSMUST00000097146.4	517	1	447	-129	447	129	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	101213948	101213749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_101213700_101213900
ES.22241.1	chr3	+	7388	12	NNC	ENSMUSG00000042035.12	novel	3876	11	NA	NA	-4550	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4341580176091	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGCCACATGCTGAAA	NA	False	NA	15	True	NA	NA	NA	101279848	101370376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101279928_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340233_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.10	chr3	+	2502	1	Genic_Genomic	ENSMUSG00000042035.12	novel	NA	NA	NA	NA	-17	27	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGCTTCGCAACAT	235	False	NA	NA	False	NA	NA	NA	101284381	101286883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_101284400_101286900
ES.22241.11	chr3	+	5124	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-15	581	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACTGACTGCACATGT	237	False	NA	NA	False	NA	NA	NA	101284383	101368053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.12	chr3	+	5301	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-6	767	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTGAGGGTTGCCCTG	246	False	NA	NA	False	NA	NA	NA	101284392	101368239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.13	chr3	+	2995	2	FSM	ENSMUSG00000042035.12	ENSMUST00000198995.5	1855	2	0	-1140	0	1140	multi-exon	FALSE	canonical	3	79	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTTGAGTCGGTCTA	252	False	NA	NA	False	AATAAA	-4	NA	101284398	101287996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121
ES.22241.14	chr3	+	7366	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	1	4	1	-4	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTTTTGCCACATGC	253	False	NA	10	True	NA	NA	NA	101284399	101370371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.15	chr3	+	7154	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	1	216	1	-216	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTTTACATTTTCTGGA	253	False	NA	7	True	AGTAAA	-15	NA	101284399	101370159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.16	chr3	+	5032	11	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	1	-1173	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.8315405352181	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTGCCTTTCTGCC	253	False	NA	NA	False	AGTAAA	-1	NA	101284399	101366299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938
ES.22241.17	chr3	+	4967	10	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	6	4076	6	-1173	5prime_fragment	FALSE	canonical	2	14	junction_5	19.7765292989218	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTGCCTTTCTGCC	258	False	NA	NA	False	AGTAAA	-1	NA	101284404	101366299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938
ES.22241.18	chr3	+	4946	12	NNC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	9	430	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	20.256618141052	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTTT	261	False	NA	NA	False	AATATA	-20	NA	101284407	101367902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340233_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.19	chr3	+	6725	11	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	12.416118556135	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTTGCCACATGCTG	269	False	NA	12	True	NA	NA	NA	101284415	101370373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.2	chr3	+	7448	11	NNC	ENSMUSG00000042035.12	novel	3876	11	NA	NA	-4543	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	17.6351920885484	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTTTTGCCACATGCT	NA	False	NA	11	True	NA	NA	NA	101279855	101370372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101280056_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.22	chr3	+	7780	11	NNC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.8126359643934	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTTGCCACATGCTG	290	False	NA	12	True	NA	NA	NA	101284436	101370373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101284968_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.23	chr3	+	7295	11	NNC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	48	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.7165138170451	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTTTTGCCACATGC	300	False	NA	10	True	NA	NA	NA	101284446	101370371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364962_101365425_101367102
ES.22241.24	chr3	+	4915	10	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	901	2158	-354	745	3prime_fragment	FALSE	canonical	2	14	junction_4	15.0636509600732	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGGCTCCAGGCGGCAC	1153	False	NA	NA	False	NA	NA	NA	101285299	101368217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.25	chr3	+	4060	10	NNC	ENSMUSG00000042035.12	novel	3876	11	NA	NA	47112	341	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.9792171795872	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCTCTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	101332765	101367813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101333145_101334345_101334757_101338519_101338910_101340233_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.27	chr3	+	4287	5	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	62652	336	61397	-336	3prime_fragment	FALSE	canonical	3	26	junction_2	5.24404424085076	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAGAACTGTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	101347050	101370039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.28	chr3	+	4170	3	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	78019	0	76764	0	3prime_fragment	FALSE	canonical	3	29	junction_2	2	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGCCACATGCTGAA	NA	False	NA	14	True	NA	NA	NA	101362417	101370375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_101362829_101364938_101365425_101367102
ES.22241.3	chr3	+	4971	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	-73	2473	-73	430	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTTT	179	False	NA	NA	False	AATATA	-20	NA	101284325	101367902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.4	chr3	+	3998	7	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-35	-22909	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	24.037586308853	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTTAGTACCAAAGAAG	217	False	NA	NA	False	NA	NA	NA	101284363	101344563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646
ES.22241.5	chr3	+	1911	2	FSM	ENSMUSG00000042035.12	ENSMUST00000198995.5	1855	2	-29	-27	-29	27	multi-exon	FALSE	canonical	3	79	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTGCTTCGCAACAT	223	False	NA	NA	False	NA	NA	NA	101284369	101286883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121
ES.22241.6	chr3	+	7459	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-26	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCCACATGCTGAAAT	226	False	NA	16	True	NA	NA	NA	101284372	101370377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.7	chr3	+	7399	13	NNC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.2694355564244	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTGCCACATGCTGA	232	False	NA	13	True	NA	NA	NA	101284378	101370374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102_101368383_101368433
ES.22241.8	chr3	+	7235	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	-20	-216	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTTTACATTTTCTGGA	232	False	NA	7	True	AGTAAA	-15	NA	101284378	101370159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22241.9	chr3	+	6092	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	-19	1298	-19	-1298	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAGAATAAACAGACAACA	233	False	NA	NA	False	AGTAAA	-31	NA	101284379	101369077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ES.22242.1	chr3	-	1316	1	Intergenic	novelGene_18346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAAAGTGAGCTAC	5387	False	NA	NA	False	NA	NA	NA	101294849	101293533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_101293500_101294800
ES.22243.1	chr3	-	1372	1	Antisense	novelGene_ENSMUSG00000042035.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATGTTTGGGTATAT	NA	False	NA	NA	False	AAGAAA	-36	NA	101369270	101367898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_101367900_101369300
ES.22244.1	chr3	+	5862	1	Intergenic	novelGene_18347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTACCTTGGTCATGGT	867	False	NA	NA	False	NA	NA	NA	101377983	101383845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_101378000_101383800
ES.22245.1	chr3	+	3534	1	Intergenic	novelGene_18348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAATTGGCCAATCCTT	NA	False	NA	NA	False	NA	NA	NA	101416576	101420110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_101416600_101420100
ES.22246.1	chr3	-	171	1	Intergenic	novelGene_18349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAAATATATATGTATG	NA	False	NA	NA	False	NA	NA	NA	101471774	101471603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_101471600_101471800
ES.22247.1	chr3	+	198	1	Intergenic	novelGene_18350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTACCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	101472992	101473190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_101473000_101473200
ES.22248.1	chr3	+	2027	13	Antisense	novelGene_ENSMUSG00000104693.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCCGCCCACGCGT	NA	False	NA	NA	False	NA	NA	NA	101492141	101512022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_101492212_101493440_101493638_101494133_101494267_101496321_101496429_101497076_101497280_101497760_101498031_101498435_101498557_101498657_101498791_101499096_101499211_101499693_101499897_101501517_101501578_101502312_101502423_101511716
ES.22249.10	chr3	-	2922	19	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.6966876037952	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTTGAGTCCTTG	NA	False	NA	-12	True	AATAAA	-18	NA	101512005	101483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483678_101488524_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.12	chr3	-	3607	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_17	85.0865383492857	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCTTTTGAGTCCTT	NA	False	NA	-13	True	AATAAA	-17	NA	101511995	101483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498715_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.14	chr3	-	3613	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	87.0868878365615	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCTTTTGAGTCCTT	NA	False	NA	-13	True	AATAAA	-17	NA	101511978	101483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501542_101502313_101502425_101511718
ES.22249.16	chr3	-	3488	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	-6050	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	112.716174307032	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCTTTTGAGTCCTT	NA	False	NA	-13	True	AATAAA	-17	NA	101502405	101483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101495999_101496117_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313
ES.22249.18	chr3	-	1981	13	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	2170	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	116.427701696041	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGCTTTTGAGTCCT	NA	False	NA	-14	True	AATAAA	-16	NA	101494185	101483542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494138
ES.22249.19	chr3	-	3600	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	61	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	87.0399001313537	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGCTTTTGAGTCCT	NA	False	NA	-14	True	AATAAA	-16	NA	101511939	101483542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490013_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.2	chr3	-	3724	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	-49	4	-49	-4	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101512049	101483538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.21	chr3	-	3627	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	34	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.4080748887267	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGCTTTTGAGTCCT	NA	False	NA	-14	True	AATAAA	-16	NA	101511966	101483542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486398_101486832_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.22	chr3	-	6058	21	NIC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	21	-8	intron_retention	FALSE	canonical	3	297	junction_15	42.1492585937167	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGCTTTTGAGTCCT	NA	False	NA	-14	True	AATAAA	-16	NA	101511979	101483542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_101483901_101484234_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.22249.3	chr3	-	5361	21	NIC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	-6054	-4	intron_retention	FALSE	canonical	3	297	junction_16	44.7991071339597	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGAGTCCTTGTC	NA	False	NA	-10	True	AATAAA	-20	NA	101502409	101483538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_101483901_101484234_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313
ES.22249.6	chr3	-	1776	12	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	120.047717785281	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTTGAGTCCTTG	NA	False	NA	-12	True	AATAAA	-18	NA	101511979	101483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490069_101501518_101501579_101502313_101502425_101511718
ES.22249.9	chr3	-	3650	23	NNC	ENSMUSG00000033161.11	novel	3679	23	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.100477567392	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTTGAGTCCTTG	NA	False	NA	-12	True	AATAAA	-18	NA	101511978	101483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101483901_101484234_101484327_101486309_101486405_101486829_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489482_101489999_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ES.2225.1	chr1	-	2200	1	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGTGGTGTGCCTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	192781414	192779214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192779200_192781400
ES.22250.1	chr3	-	3019	7	NNC	ENSMUSG00000044313.14	novel	3558	7	NA	NA	-77	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.52752523165195	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGGTTTCATGTGAT	NA	False	NA	NA	False	AATATA	-13	NA	101743616	101720996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_101722569_101725938_101726134_101726681_101726861_101730555_101730848_101734046_101734188_101742309_101742570_101743236
ES.22250.2	chr3	-	2941	7	FSM	ENSMUSG00000044313.14	ENSMUST00000061831.11	3558	7	11	606	11	1	multi-exon	FALSE	canonical	0	0	junction_4	1.34370962471642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTGGTTTCATGTGA	NA	False	NA	NA	False	AATATA	-12	NA	101743528	101720997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_101722569_101725938_101726134_101726681_101726861_101730555_101730848_101734046_101734188_101742309_101742581_101743236
ES.22251.1	chr3	-	156	1	Intergenic	novelGene_18351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	101904551	101904395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_101904400_101904600
ES.22252.1	chr3	+	1658	3	Intergenic	novelGene_18352	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCAGTTGTAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	101929909	101935092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_101930017_101932267_101932514_101933787
ES.22253.1	chr3	+	177	1	Intergenic	novelGene_18353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5255	False	NA	NA	False	NA	NA	NA	102017757	102017934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102017800_102017900
ES.22254.1	chr3	+	3687	1	Intergenic	novelGene_18354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAACTAAAA	NA	False	NA	NA	False	NA	NA	NA	102027652	102031339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102027700_102031300
ES.22255.1	chr3	-	3417	4	Antisense	novelGene_ENSMUSG00000106296.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAAGTGACTCGGTGGG	NA	False	NA	NA	False	NA	NA	NA	102060383	102042444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102045659_102047820_102047905_102048342_102048421_102060342
ES.22255.2	chr3	-	2627	1	Intergenic	novelGene_18355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGATGTGGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	102060382	102057755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102057800_102060400
ES.22256.1	chr3	-	7968	1	Genic_Genomic	ENSMUSG00000027860.16	novel	NA	NA	NA	NA	4510	120	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTGGGGACCACATTT	NA	False	NA	NA	False	NA	NA	NA	102068746	102060778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_102060800_102068700
ES.22256.10	chr3	-	3202	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-452	819	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	110.3653025185	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATAGCCTACTCTTTTT	NA	False	NA	-4	True	NA	NA	NA	102073708	102063213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073513
ES.22256.12	chr3	-	3033	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1944	818	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_2	74.5	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	-5	True	NA	NA	NA	102071312	102063214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102071113
ES.22256.13	chr3	-	2980	4	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1842	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.9666295470958	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATAGCCTACTCTTTT	NA	False	NA	-5	True	NA	NA	NA	102071414	102063214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102065917_102066001_102070614_102070850_102071351
ES.22256.15	chr3	-	4162	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	52	2317	52	817	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATAGCCTACTCTTT	NA	False	NA	-6	True	NA	NA	NA	102111957	102063215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.16	chr3	-	3181	6	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-728	817	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	105.491990217267	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATAGCCTACTCTTT	NA	False	NA	-6	True	NA	NA	NA	102075017	102063215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102074975
ES.22256.17	chr3	-	3160	4	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-452	816	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	125.754611137016	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTCATAGCCTACTCTT	NA	False	NA	-7	True	NA	NA	NA	102073708	102063216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073513
ES.22256.2	chr3	-	6554	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-23	0	-23	0	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATAGTGCAGTTCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	102112032	102060898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.22	chr3	-	4639	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-3517	815	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	125.478639173721	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCATAGCCTACTCT	NA	False	NA	-8	True	NA	NA	NA	102077806	102063217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102063836_102070614_102070850_102072670_102072804_102074153
ES.22256.24	chr3	-	4197	9	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	54	815	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	80.6907677494768	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCATAGCCTACTCT	NA	False	NA	-8	True	NA	NA	NA	102111955	102063217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.25	chr3	-	3317	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	477	815	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	130.290061017715	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCATAGCCTACTCT	NA	False	NA	-8	True	NA	NA	NA	102073769	102063217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073030_102073128_102073513
ES.22256.26	chr3	-	4023	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	36	2472	36	662	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGATCCTTTAAAGTCTT	NA	False	NA	NA	False	AAGAAA	-15	NA	102111973	102063370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.29	chr3	-	3242	9	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	40	22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	89.0623903508097	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGGAATATTTGTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	102111969	102064010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091477_102091613_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.30	chr3	-	2366	4	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-452	22	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	125.754611137016	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGGAATATTTGTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	102073708	102064010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073513
ES.22256.34	chr3	-	3499	9	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-47	16	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	80.6907677494768	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAATTGGCATGGAATAT	NA	False	NA	NA	False	ATTAAA	-14	NA	102112056	102064016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.37	chr3	-	2127	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1794	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	65	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102071462	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102071351
ES.22256.38	chr3	-	2505	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	488	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.094547146594	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102073758	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073441
ES.22256.39	chr3	-	2402	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-471	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	110.3653025185	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102073727	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073513
ES.22256.4	chr3	-	5527	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-463	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	110.3653025185	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATAGTGCAGTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	102073719	102060899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073513
ES.22256.40	chr3	-	2338	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	103.228811385194	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102075030	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102074975
ES.22256.41	chr3	-	2329	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-759	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.395507027639	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102075048	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102075002
ES.22256.42	chr3	-	2636	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-642	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	109.429200856079	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102074931	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102074578
ES.22256.43	chr3	-	3549	9	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_2	93.7955722569035	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102111941	102064032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102065917_102066138_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.44	chr3	-	2239	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1918	-2	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_2	74.5	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	102071338	102064034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102071113
ES.22256.46	chr3	-	1851	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	88	4592	88	5	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGGAGGAAGTTCTTTT	NA	False	NA	NA	False	AAAACA	-32	NA	102111921	102065490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.49	chr3	-	1843	9	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	97	-30	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	80.6907677494768	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAGAATATATAA	NA	False	NA	NA	False	NA	NA	NA	102111912	102065528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.50	chr3	-	3333	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-12	8011	-12	1592	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAAACAGCTGTTGATT	NA	False	NA	NA	False	GATAAA	-27	NA	102112021	102068909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.52	chr3	-	2257	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	-25	-1760	-25	1583	multi-exon	FALSE	canonical	3	141	junction_2	87.5	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTCTGACTAAACAG	NA	False	NA	NA	False	GATAAA	-18	NA	102073281	102068918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102070850_102072670_102072804_102073088
ES.22256.53	chr3	-	1748	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-729	1090	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGATCTGTTTACCAAC	NA	False	NA	NA	False	NA	NA	NA	102075018	102069411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
ES.22256.54	chr3	-	1667	2	ISM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	481	-181	438	181	3prime_fragment	FALSE	canonical	3	316	junction_1	0	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTCTCTCTGGCCCATC	NA	False	NA	-7	True	NA	NA	NA	102073808	102070320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102070850_102072670
ES.22256.55	chr3	-	978	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-436	177	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	120.77535965585	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCCGTCTCTCTGGCC	NA	False	NA	-11	True	NA	NA	NA	102074725	102070324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102074578
ES.22256.56	chr3	-	1932	7	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-733	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	100.534681688571	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCCGTCTCTCTGGCC	NA	False	NA	-11	True	NA	NA	NA	102112742	102070324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102112534
ES.22256.57	chr3	-	853	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-708	177	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	116.808604135141	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGCCGTCTCTCTGGCC	NA	False	NA	-11	True	NA	NA	NA	102074997	102070324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102074975
ES.22256.6	chr3	-	5838	7	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	84	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	97.1522287729703	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATAGTGCAGTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	102111925	102060899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102096724_102096864_102104107_102104293_102111827
ES.22256.60	chr3	-	747	3	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	-490	176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGCCGTCTCTCTGGC	NA	False	NA	-12	True	NA	NA	NA	102073746	102070325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102073656
ES.22256.61	chr3	-	930	3	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	457	173	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	154	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATGAGCCGTCTCTCT	NA	False	NA	-15	True	NA	NA	NA	102073789	102070328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102073513
ES.22256.62	chr3	-	1850	7	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-31	9513	-31	90	5prime_fragment	FALSE	canonical	3	72	junction_3	85.9348913745491	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTACAAGTGATTGTAA	NA	False	NA	79	True	NA	NA	NA	102112040	102070411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.64	chr3	-	668	3	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	-437	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	154	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTTGTGTGTTTCTGT	NA	False	NA	-4	True	NA	NA	NA	102073693	102070494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102073513
ES.22256.66	chr3	-	1709	8	NIC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	60	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	84.7726852427438	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATGTACTTGTGTGT	NA	False	NA	-10	True	NA	NA	NA	102111949	102070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102070850_102072670_102072804_102073088_102073128_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.67	chr3	-	1923	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	-1305	-1	-1305	1	multi-exon	FALSE	canonical	3	188	junction_2	64	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATGTACTTGTGTGT	NA	False	NA	-10	True	NA	NA	NA	102075594	102070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102070850_102072670_102072804_102074153
ES.22256.68	chr3	-	745	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-677	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	127.195387757051	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATGTACTTGTGTGT	NA	False	NA	-10	True	NA	NA	NA	102074966	102070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074837
ES.22256.69	chr3	-	414	2	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	1840	1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATGTACTTGTGTGT	NA	False	NA	-10	True	NA	NA	NA	102071416	102070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102071351
ES.22256.7	chr3	-	3715	4	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	409	1170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.06157014731	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGCTCACACATCCTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	102073837	102062862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073441
ES.22256.70	chr3	-	783	4	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-456	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	126.336411571996	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATGTACTTGTGTGT	NA	False	NA	-10	True	NA	NA	NA	102074745	102070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074578
ES.22256.71	chr3	-	640	4	NNC	ENSMUSG00000027860.16	novel	617	3	NA	NA	-711	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	119.08633656115	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTATGTACTTGTGTG	NA	False	NA	-11	True	NA	NA	NA	102075000	102070501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102074975
ES.22256.72	chr3	-	1153	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-8783	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	132.705265532307	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTATGTACTTGTGT	NA	False	NA	-12	True	NA	NA	NA	102083072	102070502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102070850_102072670_102072804_102074153_102074288_102082388_102082525_102082669
ES.22256.74	chr3	-	3426	4	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	8	28048	8	2725	5prime_fragment	FALSE	canonical	3	91	junction_3	2.05480466765633	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGGTCATGGTATCT	NA	False	NA	NA	False	NA	NA	NA	102112001	102088946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.8	chr3	-	4496	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	-13	2048	-13	1086	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	102112022	102062946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ES.22256.9	chr3	-	3856	4	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	488	979	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	128.646803302686	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAGAACTCAATGAAGAG	NA	False	NA	NA	False	NA	NA	NA	102073758	102063053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073030
ES.22257.1	chr3	-	3892	1	Intergenic	novelGene_18356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	102145652	102141760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102141800_102145700
ES.22258.1	chr3	+	5203	1	Intergenic	novelGene_18357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTCCATTATTCCTAC	NA	False	NA	NA	False	NA	NA	NA	102540035	102545238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102540000_102545200
ES.22259.1	chr3	-	3021	2	NNC	ENSMUSG00000086745.2	novel	590	4	NA	NA	9040	2761	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTTGTGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	102633693	102624785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102627753_102633639
ES.22259.2	chr3	-	2311	3	NNC	ENSMUSG00000086745.2	novel	590	4	NA	NA	15091	2759	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTTTCTTGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	102627642	102624787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102626905_102627010_102627163_102627600
ES.22259.3	chr3	-	3087	3	NNC	ENSMUSG00000086745.2	novel	590	4	NA	NA	8827	2757	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCGTTTCTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	102633906	102624789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102627764_102633643_102633728_102633877
ES.2226.1	chr1	-	5512	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	58	0	-7	0	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTGGGGTGTGTGTG	NA	False	NA	NA	False	AAAACA	-7	NA	192812522	192786709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.10	chr1	-	2488	11	NNC	ENSMUSG00000016181.11	novel	5504	12	NA	NA	-96	464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2943680594069	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192810749	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192794529_192794731_192796064_192796289_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574
ES.2226.11	chr1	-	3702	12	NNC	ENSMUSG00000016181.11	novel	5504	12	NA	NA	60	464	intron_retention	FALSE	canonical	0	0	junction_5	27.2575715464817	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812455	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192796064_192796289_192796912_192797026_192797146_192797330_192799808_192800012_192800627_192800721_192802617_192803029_192804313_192805696_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.12	chr1	-	2597	12	NNC	ENSMUSG00000016181.11	novel	5504	12	NA	NA	-5	464	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	24.0869636563395	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812520	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192796064_192796289_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810851_192811798_192811839_192812351
ES.2226.13	chr1	-	3833	12	NNC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	-12	464	intron_retention	FALSE	canonical	0	0	junction_5	24.4073556180194	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812564	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800627_192800721_192802617_192803029_192804313_192805696_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.14	chr1	-	5743	10	NIC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	-7	464	intron_retention	FALSE	canonical	3	56	junction_5	6.32065006814573	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812559	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192790095_192796064_192797026_192797146_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.15	chr1	-	2533	12	NNC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	276	463	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	18.9034082370139	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATTTTATGCGTA	NA	False	NA	-20	True	NA	NA	NA	192812239	192789597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812159
ES.2226.16	chr1	-	3872	12	NNC	ENSMUSG00000016181.11	novel	428	4	NA	NA	11	-2944	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.0601483781829	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGCATGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	192812541	192793004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192794731_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.2	chr1	-	4783	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	59	728	-6	-712	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTCAGGGTGCATCC	NA	False	NA	NA	False	CATAAA	-17	NA	192812521	192787437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.3	chr1	-	3295	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	10	2265	10	1086	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCACAGGTGACCCTC	NA	False	NA	NA	False	TATAAA	-22	NA	192812570	192788974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.4	chr1	-	3224	12	NNC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	2	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.1755698569519	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAGAAGCATTATTT	NA	False	NA	NA	False	AAGAAA	-14	NA	192812550	192789031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812345
ES.2226.5	chr1	-	2984	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	78	2508	13	843	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTAGATTCTTCCTA	NA	False	NA	NA	False	NA	NA	NA	192812502	192789217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.6	chr1	-	2665	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	36	2869	8	482	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGCTTTGCCTGCGTT	NA	False	NA	-1	True	NA	NA	NA	192812544	192789578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.7	chr1	-	9259	10	NIC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	13	481	intron_retention	FALSE	canonical	3	56	junction_2	6.5659052011974	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGCTTTGCCTGCGT	NA	False	NA	-2	True	NA	NA	NA	192812567	192789579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.8	chr1	-	5099	11	NIC	ENSMUSG00000016181.11	novel	5504	12	NA	NA	-7	481	intron_retention	FALSE	canonical	2	5	junction_2	18.7512666238844	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGCTTTGCCTGCGT	NA	False	NA	-2	True	NA	NA	NA	192812522	192789579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192790095_192796064_192796289_192796912_192797026_192797146_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.2226.9	chr1	-	5488	10	NIC	ENSMUSG00000016181.11	novel	5570	12	NA	NA	-17	464	intron_retention	FALSE	canonical	1	2	junction_2	19.5587118664943	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATGCGTAT	NA	False	NA	-19	True	NA	NA	NA	192812532	192789596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_192790095_192796064_192796196_192796912_192797026_192797146_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ES.22260.1	chr3	+	4065	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	366	53	-62	-53	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGCATGTTAATTATT	NA	False	NA	NA	False	ATTAAA	-29	NA	102642210	102679555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22260.2	chr3	+	446	3	NNC	ENSMUSG00000027858.14	novel	4484	8	NA	NA	-27	-18369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGAGCACTGACTGT	NA	False	NA	NA	False	NA	NA	NA	102642245	102657968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102642382_102657073_102657177_102657761
ES.22260.3	chr3	+	3015	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	408	1061	-20	-1061	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTGAGTTATCTTAAA	NA	False	NA	5	True	ATTAAA	-17	NA	102642252	102678547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22260.4	chr3	+	979	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	417	3088	-11	-1	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAAAAAGCAATGAGAG	NA	False	NA	NA	False	NA	NA	NA	102642261	102676520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22260.6	chr3	+	3419	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	419	646	-9	-646	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATAAGTTTTCTGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	102642263	102678962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22260.7	chr3	+	3092	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	448	944	20	-944	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGCTGTTGTTGTGCA	NA	False	NA	NA	False	AGTAAA	-17	NA	102642292	102678664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22260.8	chr3	+	2364	8	NNC	ENSMUSG00000027858.14	novel	425	4	NA	NA	-10074	1406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2957721544892	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTTGACAAATGCCAGC	NA	False	NA	NA	False	TTTAAA	-29	NA	102656551	102677927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102656650_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ES.22261.1	chr3	-	3257	31	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	-2	106	combination_of_known_splicesites	TRUE	canonical	3	35	junction_30	18.8657243580933	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTGATGAAGAGATCA	NA	False	NA	NA	False	NA	NA	NA	102843418	102725708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.10	chr3	-	3191	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	21.1384063311836	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843414	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.11	chr3	-	3297	32	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	3	35	junction_31	16.9376649901153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843444	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.15	chr3	-	3218	31	NNC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	-40	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.5938801588726	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843456	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758875_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102842175_102842198_102842859_102842976_102843301
ES.22261.16	chr3	-	3244	32	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	29.9155244917943	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843399	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772447_102783618_102783682_102786089_102786172_102800853_102800925_102803174_102803289_102806169_102806274_102807347_102807449_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.18	chr3	-	2968	30	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	23.0120167129822	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTCATTGATTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	102843414	102725813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.2	chr3	-	3432	33	FSM	ENSMUSG00000027855.14	ENSMUST00000196988.5	3189	33	2	-245	2	3	multi-exon	FALSE	canonical	3	8	junction_28	25.0723951787618	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843414	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.20	chr3	-	3185	30	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	21.3833144192595	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843455	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.21	chr3	-	3401	9	ISM	ENSMUSG00000027855.14	ENSMUST00000029448.11	3437	33	79800	0	-22417	0	3prime_fragment	FALSE	canonical	3	64	junction_8	14.4778926297994	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102763616	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426
ES.22261.25	chr3	-	3212	32	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	21.1321100934838	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843389	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786122_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.26	chr3	-	3302	33	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	30.2783796369208	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843415	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748176_102748358_102752347_102752405_102755926_102755963_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.27	chr3	-	3389	33	FSM	ENSMUSG00000027855.14	ENSMUST00000029448.11	3437	33	48	0	38	0	multi-exon	FALSE	canonical	3	8	junction_28	23.7190382064176	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843368	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.28	chr3	-	3090	30	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	21.4040457575645	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843414	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.29	chr3	-	3266	32	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	21.2702251183876	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807353_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.30	chr3	-	3158	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	21.2753378351555	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATTTCTCATTGATTT	NA	False	NA	-3	True	ATTAAA	-13	NA	102843414	102725815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.32	chr3	-	3118	32	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	21.0526815542427	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTGTATTCAGATAC	NA	False	NA	NA	False	AATAAA	-21	NA	102843414	102725963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816281_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.33	chr3	-	3144	32	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	-28	56	combination_of_known_junctions	FALSE	canonical	3	35	junction_31	16.9376649901153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTGTATTCAGATA	NA	False	NA	NA	False	AATAAA	-20	NA	102843444	102725964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.34	chr3	-	2939	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	55	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	19.5058110999432	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATTGTATTCAGAT	NA	False	NA	NA	False	AATAAA	-19	NA	102843414	102725965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.35	chr3	-	3005	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-3	53	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	16.640279110907	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTATTGTATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	102843419	102725967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.36	chr3	-	4855	18	ISM	ENSMUSG00000027855.14	ENSMUST00000196988.5	3189	33	24184	-89	24174	53	3prime_fragment	FALSE	canonical	3	64	junction_8	13.4917634748353	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTATTGTATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	102819232	102725967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221
ES.22261.37	chr3	-	3051	31	NNC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.0026708029942	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTATTGTATTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	102843414	102725967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816281_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.4	chr3	-	3303	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	14.4403037547212	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843444	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.40	chr3	-	1699	1	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-31182	-44626	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTACAGTGTAAGTCTAT	5953	False	NA	NA	False	NA	NA	NA	102772381	102770682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102770700_102772400
ES.22261.41	chr3	-	3404	23	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	2	-44648	combination_of_known_junctions	FALSE	canonical	3	35	junction_22	17.8348715898966	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102843414	102770704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.42	chr3	-	2434	17	NIC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	0	25110	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	19.2646048493085	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACATAGCGGAGCATG	NA	False	NA	NA	False	NA	NA	NA	102843416	102805213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.5	chr3	-	3108	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	19.5058110999432	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843429	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.6	chr3	-	3098	31	NNC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	45	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	24.4460630777228	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843361	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807346_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.7	chr3	-	3191	31	NNC	ENSMUSG00000027855.14	novel	3189	33	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	22.9075678906921	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843413	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829773_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ES.22261.8	chr3	-	3321	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_27	25.1209768031879	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843414	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22261.9	chr3	-	3222	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	-64	3	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	16.640279110907	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTGATTTTTGT	NA	False	NA	1	True	ATTAAA	-17	NA	102843480	102725811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ES.22262.1	chr3	-	157	1	Intergenic	novelGene_18358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	102849771	102849614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102849600_102849800
ES.22263.1	chr3	+	273	1	Intergenic	novelGene_18359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	102855781	102856054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102855800_102856100
ES.22264.1	chr3	-	200	1	Intergenic	novelGene_18360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAAATCTGTTGTT	NA	False	NA	NA	False	AGTAAA	-9	NA	102898542	102898342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102898300_102898500
ES.22265.1	chr3	+	1880	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	17	5478	-5	787	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGATGGACTTTGGT	NA	False	NA	NA	False	TATAAA	-19	NA	102903040	102910297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.10	chr3	+	7334	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	41	0	19	0	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGGAAACCGTGGTGT	NA	False	NA	9	True	NA	NA	NA	102903064	102915775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.11	chr3	+	2364	5	NIC	ENSMUSG00000027854.13	novel	7375	5	NA	NA	-32	1285	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	170.107870188301	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCTCATTTTACTG	NA	False	NA	16	True	AATAAA	-13	NA	102903078	102910795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102903284_102903471_102903578_102904558_102904726_102905805_102905920_102909023
ES.22265.12	chr3	+	928	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	63	6384	-24	-119	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTTTTTCACAGCTT	NA	False	NA	NA	False	TATAAA	-17	NA	102903086	102909391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.13	chr3	+	2220	4	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	363	4980	22	1285	3prime_fragment	FALSE	canonical	3	364	junction_3	15.121728296285	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCTCATTTTACTG	NA	False	NA	16	True	AATAAA	-13	NA	102903386	102910795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.14	chr3	+	678	1	FSM	ENSMUSG00000027854.13	ENSMUST00000196827.2	2511	1	1833	0	1833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	102905876	102906554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102905900_102906600
ES.22265.15	chr3	+	176	1	Intergenic	novelGene_18361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102908740	102908916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102908700_102908900
ES.22265.2	chr3	+	1157	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	18	6200	-4	65	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATTGGCAGAGTCTC	NA	False	NA	66	True	NA	NA	NA	102903041	102909575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.3	chr3	+	2376	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	22	4977	0	1288	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTCATTTTACTGAGA	NA	False	NA	19	True	AATAAA	-16	NA	102903045	102910798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22265.4	chr3	+	2393	5	NNC	ENSMUSG00000027854.13	novel	7375	5	NA	NA	0	1285	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	168.651082119268	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCTCATTTTACTG	NA	False	NA	16	True	AATAAA	-13	NA	102903045	102910795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102903284_102903471_102903578_102904538_102904702_102905805_102905920_102909023
ES.22265.5	chr3	+	2266	4	NIC	ENSMUSG00000027854.13	novel	7375	5	NA	NA	1	1285	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	176.24667057533	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCTCATTTTACTG	NA	False	NA	16	True	AATAAA	-13	NA	102903046	102910795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102903284_102904558_102904702_102905805_102905920_102909023
ES.22265.7	chr3	+	534	3	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	23	11026	1	82	5prime_fragment	FALSE	canonical	3	384	junction_2	20	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGTTCCTTTGTTTGC	NA	False	NA	NA	False	AATAAA	-27	NA	102903046	102904749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102903284_102903471_102903578_102904558
ES.22265.8	chr3	+	2277	4	NNC	ENSMUSG00000027854.13	novel	7375	5	NA	NA	6	1281	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	180.474067081365	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGATTTGCTCATTTT	NA	False	NA	12	True	AATAAA	-9	NA	102903051	102910791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102903284_102904538_102904702_102905805_102905920_102909023
ES.22265.9	chr3	+	4707	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	33	2635	11	-2635	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTGCCTATATCTA	NA	False	NA	NA	False	NA	NA	NA	102903056	102913140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ES.22266.1	chr3	+	133	1	Intergenic	novelGene_18362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	102916514	102916647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_102916500_102916600
ES.22267.1	chr3	+	3843	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-174	180	7	7	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTTTTTTTAATAAAT	NA	False	NA	NA	False	AATGAA	-1	NA	102927748	102965127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.100	chr3	+	3104	21	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	5280.7401706579	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927940	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947057_102947104_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.101	chr3	+	3796	18	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	6	-7	intron_retention	FALSE	canonical	0	0	junction_11	4679.46481649965	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927941	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.102	chr3	+	4063	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4826.64481175991	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927941	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950558_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957081_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.103	chr3	+	4110	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4594.33365928653	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTAGCACCTAGCGCTT	NA	False	NA	15	True	AATAAA	-18	NA	102927941	102965495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954501_102956943_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.105	chr3	+	3873	18	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	5602.05845694396	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927943	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951893_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.106	chr3	+	3940	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5101.79993564363	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACCTAGCGCTTTCAT	NA	False	NA	19	True	AATAAA	-22	NA	102927943	102965499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954180_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.107	chr3	+	3987	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5109.6194480921	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102927945	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951147_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.109	chr3	+	4843	18	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	11	-9	intron_retention	FALSE	canonical	0	0	junction_11	4679.46481649965	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACACTAGCACCTAGCGC	NA	False	NA	13	True	AATAAA	-16	NA	102927946	102965493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.11	chr3	+	4076	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	4600.60262424096	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACCTAGCGCTTTCAT	NA	False	NA	19	True	AATAAA	-22	NA	102927883	102965499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954499_102956943_102957044_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.112	chr3	+	3022	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5364.9645342997	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927946	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947040_102947104_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.113	chr3	+	3434	18	FSM	ENSMUSG00000068823.11	ENSMUST00000199240.5	3457	18	21	2	14	-2	multi-exon	FALSE	canonical	0	0	junction_10	5214.76529411098	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927949	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.115	chr3	+	4124	19	NNC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4738.9715128918	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927977	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102928123_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.116	chr3	+	3922	20	NIC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	4721.79777608351	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927977	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.118	chr3	+	4209	19	FSM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	-2	-380	-2	-2	multi-exon	FALSE	canonical	0	0	junction_11	4738.14950757918	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927977	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.119	chr3	+	3197	20	NIC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	9	-42	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	4721.79777608351	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAATAAATAAAT	NA	False	NA	-10	True	NA	NA	NA	102927988	102964406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.12	chr3	+	3083	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-34	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4594.89725408776	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAATAAATAAAT	NA	False	NA	-10	True	NA	NA	NA	102927888	102964406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957053_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.120	chr3	+	3759	19	NIC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5590.20122432056	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927990	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102928208_102936104_102936529_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951893_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.121	chr3	+	3803	19	FSM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	22	2	22	-2	multi-exon	FALSE	canonical	0	0	junction_11	4738.14950757918	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102928001	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.122	chr3	+	3124	19	FSM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	24	679	24	-7	multi-exon	FALSE	canonical	0	0	junction_11	4738.14950757918	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102928003	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.123	chr3	+	3075	20	NNC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	81	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4722.56029555498	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102928060	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102928123_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.124	chr3	+	4217	20	NIC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	83	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	4721.79777608351	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102928062	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.125	chr3	+	4582	19	NNC	ENSMUSG00000068823.11	novel	2584	14	NA	NA	452	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4739.08897486937	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCACCTAGCGCTTTCA	NA	False	NA	18	True	AATAAA	-21	NA	102928431	102965498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102929037_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.126	chr3	+	7492	2	NNC	ENSMUSG00000068823.11	novel	4277	2	NA	NA	2492	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTTTTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	102930471	102938233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102932219_102932488
ES.22267.127	chr3	+	2922	18	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	8123	679	-215	-7	3prime_fragment	FALSE	canonical	0	0	junction_10	4186.45685886549	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102936102	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.128	chr3	+	4066	19	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-214	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4233.9062239946	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACACTAGCACCTAGCG	NA	False	NA	12	True	AATAAA	-15	NA	102936103	102965492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954499_102956939_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.129	chr3	+	3687	19	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-214	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	4820.41913294725	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102936103	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960242_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.130	chr3	+	3975	18	NNC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	-214	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4185.11549534091	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102936103	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954499_102956939_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.133	chr3	+	3598	18	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	8124	2	-214	-2	3prime_fragment	FALSE	canonical	0	0	junction_10	4186.45685886549	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102936103	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.135	chr3	+	5669	15	NIC	ENSMUSG00000068823.11	novel	3827	19	NA	NA	-984	3	intron_retention	FALSE	canonical	0	0	junction_9	4543.67781726905	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102946071	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102962150_102962664_102963794_102964201
ES.22267.136	chr3	+	5054	16	NIC	ENSMUSG00000068823.11	novel	2671	19	NA	NA	-957	3	intron_retention	FALSE	canonical	0	0	junction_9	4534.93365576854	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102946098	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.137	chr3	+	4537	14	NIC	ENSMUSG00000068823.11	novel	3457	18	NA	NA	-627	-7	intron_retention	FALSE	canonical	0	0	junction_6	4560.24564894241	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102946428	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102948559_102950472_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.139	chr3	+	3193	16	ISM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	19052	0	-24	0	3prime_fragment	FALSE	canonical	0	0	junction_8	4418.24191983896	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102947031	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.140	chr3	+	2102	15	NNC	ENSMUSG00000068823.11	novel	3457	18	NA	NA	-68	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5105.35598111214	1300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102947246	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102947359_102948460_102948514_102950942_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.141	chr3	+	2191	15	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	20529	24	1113	-7	3prime_fragment	FALSE	canonical	0	0	junction_7	4447.71505886989	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102948456	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.142	chr3	+	3238	15	ISM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	20531	11	1116	-11	3prime_fragment	FALSE	canonical	0	0	junction_7	4447.71505886989	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACACTAGCACCTAGC	NA	False	NA	11	True	AATAAA	-14	NA	102948459	102965491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.143	chr3	+	3559	14	ISM	ENSMUSG00000068823.11	ENSMUST00000197827.5	2671	19	21075	24	-1506	-7	3prime_fragment	FALSE	canonical	0	0	junction_6	4529.65784984765	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102949002	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.144	chr3	+	4361	10	NIC	ENSMUSG00000068823.11	novel	2584	14	NA	NA	363	-8	intron_retention	FALSE	canonical	0	0	junction_3	5205.19534150351	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102951220	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.145	chr3	+	6247	8	NNC	ENSMUSG00000068823.11	novel	671	2	NA	NA	2453	0	intron_retention	TRUE	non_canonical	0	0	junction_1	6219.17061535195	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102953310	102965502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102953587_102953799_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102963794_102964201
ES.22267.146	chr3	+	3672	7	NIC	ENSMUSG00000068823.11	novel	2584	14	NA	NA	-1987	-7	intron_retention	FALSE	canonical	0	0	junction_1	4720.3519878171	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102955329	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.147	chr3	+	2295	8	ISM	ENSMUSG00000068823.11	ENSMUST00000198174.2	2584	14	6426	-399	-382	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	4452.24238847283	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102956934	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.148	chr3	+	1235	8	ISM	ENSMUSG00000068823.11	ENSMUST00000198174.2	2584	14	6426	661	-382	-7	3prime_fragment	FALSE	canonical	0	0	junction_1	4452.24238847283	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102956934	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.149	chr3	+	3775	6	NNC	ENSMUSG00000068823.11	novel	2584	14	NA	NA	-366	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	5116.60761051695	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102956950	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102957046_102957613_102957790_102958355_102958469_102960127_102962150_102962664_102963794_102964201
ES.22267.15	chr3	+	4878	17	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_10	4769.2936547086	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACAGTTGCAGCCTG	NA	False	NA	29	True	AATAAA	-25	NA	102927905	102964445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.150	chr3	+	2212	9	NNC	ENSMUSG00000068823.11	novel	3457	18	NA	NA	-352	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5504.88485205413	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGCACCTAGCGCTTT	NA	False	NA	16	True	AATAAA	-19	NA	102956964	102965496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201_102965073_102965120
ES.22267.151	chr3	+	1776	4	ISM	ENSMUSG00000068823.11	ENSMUST00000198174.2	2584	14	11461	-398	-1400	-2	3prime_fragment	FALSE	canonical	3	12698	junction_3	112.19130487203	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102961969	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.152	chr3	+	5633	9	Fusion	ENSMUSG00000027852.15_ENSMUSG00000068823.11	novel	1749	9	NA	NA	-1269	392	intron_retention	FALSE	canonical	3	741	junction_6	5823.86529586451	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102962100	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_102962150_102962664_102962829_102963660_102963794_102964201_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.153	chr3	+	1293	1	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	831	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACACTAGCACCTAGCGC	NA	False	NA	13	True	AATAAA	-16	NA	102964200	102965493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102964200_102965500
ES.22267.154	chr3	+	4484	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	-6	-8	-6	8	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCATAGGGTTTCTACT	NA	False	NA	34	True	AATAAA	-36	NA	102965594	102975238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.155	chr3	+	3425	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	-1	1046	-1	392	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965599	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.156	chr3	+	5301	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	2	-833	2	833	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTTTGTGTGTTGTTC	NA	False	NA	NA	False	AAGAAA	-16	NA	102965602	102976063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.157	chr3	+	1207	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	21	3242	21	273	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTTGTAATGTGATCA	NA	False	NA	25	True	CATAAA	-35	NA	102965621	102971988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.158	chr3	+	4134	5	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	28	1046	28	392	intron_retention	FALSE	canonical	3	741	junction_4	42.154477816716	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965628	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645
ES.22267.159	chr3	+	2357	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	34	2079	-29	-641	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCATTGATTGTTGT	NA	False	NA	19	True	AATAAA	-33	NA	102965634	102973151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.160	chr3	+	3344	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-44	-2469	-25	392	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965638	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
ES.22267.161	chr3	+	5086	6	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-24	1	intron_retention	FALSE	canonical	3	741	junction_4	37.9599789251786	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	19	True	AATAAA	-21	NA	102965639	102975223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102971474_102971549
ES.22267.162	chr3	+	2518	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	40	1912	-23	-474	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTCTTCTGATCTT	NA	False	NA	NA	False	CATAAA	-44	NA	102965640	102973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.163	chr3	+	4811	5	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-21	363	intron_retention	FALSE	canonical	3	771	junction_3	29.1376045686669	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102965642	102974155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102971474_102971549
ES.22267.165	chr3	+	4371	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-21	4	intron_retention	FALSE	canonical	2	13	junction_3	295.012852827353	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTCCCTACTGCCAT	NA	False	NA	22	True	AATAAA	-24	NA	102965642	102975226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969742_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.166	chr3	+	4466	6	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	42	38	-21	-30	intron_retention	FALSE	canonical	3	741	junction_4	37.7804182083788	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAACTGGAA	NA	False	NA	-12	True	TTTAAA	-36	NA	102965642	102975192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431
ES.22267.167	chr3	+	3329	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-21	392	intron_retention	FALSE	canonical	2	13	junction_3	295.012852827353	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965642	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969742_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.168	chr3	+	1766	9	NIC	ENSMUSG00000027852.15	novel	1749	9	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_8	338.807836391073	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	19	True	AATAAA	-21	NA	102965642	102975223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549_102971877_102972834_102972922_102974618
ES.22267.169	chr3	+	4178	6	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-21	392	intron_retention	FALSE	canonical	3	771	junction_3	27.5070899951267	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965642	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102970770_102971431_102971474_102971549
ES.22267.17	chr3	+	3099	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	165	1054	-16	0	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGTTGCAGCCTGGAA	NA	False	NA	32	True	AATAAA	-28	NA	102927906	102964448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.170	chr3	+	3936	4	NNC	ENSMUSG00000027852.15	novel	663	5	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_3	392.583182975985	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTATTTTCCCTACTG	NA	False	NA	18	True	AATAAA	-20	NA	102965642	102975222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102970093_102974104
ES.22267.171	chr3	+	1293	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	43	3134	-20	381	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTGCCTTTTTCCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	102965643	102972096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.172	chr3	+	3794	5	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-20	-653	intron_retention	FALSE	canonical	3	771	junction_3	29.1376045686669	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAGAATGTAAAATGCC	NA	False	NA	7	True	AATAAA	-21	NA	102965643	102973139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102971474_102971549
ES.22267.173	chr3	+	4378	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-39	-3508	-20	1	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	19	True	AATAAA	-21	NA	102965643	102975223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
ES.22267.174	chr3	+	1107	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-20	248	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	295.012852827353	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAATATAATTAGTGT	NA	False	NA	0	True	CATAAA	-10	NA	102965643	102971963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969742_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.176	chr3	+	3477	8	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-20	392	intron_retention	FALSE	canonical	1	4	junction_3	349.519203291304	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965643	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967254_102967351_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.177	chr3	+	4143	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	43	284	-20	-276	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGCTCTAAGCAAGTGT	NA	False	NA	NA	False	AATACA	-20	NA	102965643	102974946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.178	chr3	+	3420	7	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-18	3	intron_retention	FALSE	canonical	3	19	junction_6	360.476844687083	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTTCCCTACTGCCA	NA	False	NA	21	True	AATAAA	-23	NA	102965645	102975225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549_102971877_102972834
ES.22267.179	chr3	+	3059	8	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-13	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	279.992201057567	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTAACTGTATTTTCCC	NA	False	NA	13	True	AATAAA	-15	NA	102965650	102975217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549_102972776_102974123
ES.22267.180	chr3	+	3209	3	NNC	ENSMUSG00000027852.15	novel	832	3	NA	NA	-9	363	intron_retention	FALSE	non_canonical	0	0	junction_1	0	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102965654	102974155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102967990_102969268_102970102_102974114
ES.22267.181	chr3	+	1890	5	ISM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-27	-252	-8	252	intron_retention	FALSE	canonical	3	741	junction_4	42.154477816716	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATAATTAGTGTTGCT	NA	False	NA	4	True	CATAAA	-14	NA	102965655	102971967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645
ES.22267.182	chr3	+	4353	8	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-8	1	intron_retention	TRUE	non_canonical	0	0	junction_7	279.992201057567	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	19	True	AATAAA	-21	NA	102965655	102975223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549_102974887_102974941
ES.22267.183	chr3	+	3792	8	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_7	279.992201057567	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTATTTTCCCTACTG	NA	False	NA	18	True	AATAAA	-20	NA	102965655	102975222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549_102973434_102974048
ES.22267.185	chr3	+	4299	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-5	-8	intron_retention	FALSE	canonical	0	0	junction_5	298.742782339591	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCTTAACTGTATTTT	NA	False	NA	10	True	AATAAA	-12	NA	102965658	102975214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970673_102971431_102971474_102971549
ES.22267.186	chr3	+	2438	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-5	-483	intron_retention	FALSE	canonical	2	13	junction_3	295.012852827353	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGGCCATTTTCTCT	NA	False	NA	NA	False	CATAAA	-35	NA	102965658	102973309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969742_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.187	chr3	+	4097	5	NNC	ENSMUSG00000027852.15	novel	831	6	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	352.655905239087	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCCCTACTGCCATA	NA	False	NA	23	True	AATAAA	-25	NA	102965658	102975227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969829_102971674
ES.22267.188	chr3	+	3593	7	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-1	361	intron_retention	FALSE	canonical	1	18	junction_2	286.107011836869	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102965662	102974153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967254_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.189	chr3	+	3921	4	NIC	ENSMUSG00000027852.15	novel	831	6	NA	NA	-1	392	intron_retention	FALSE	canonical	2	44	junction_2	346.249428399047	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965662	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102969689_102969850_102970645
ES.22267.190	chr3	+	2404	8	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-1	392	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	273.388786477113	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965662	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549_102971877_102972834
ES.22267.191	chr3	+	5458	8	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	4	959	intron_retention	FALSE	canonical	1	4	junction_3	349.519203291304	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTGTCATGTCCT	NA	False	NA	NA	False	AATATA	-31	NA	102965667	102976189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967254_102967351_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.192	chr3	+	6567	5	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	356.848970154042	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTGTATTTTCCCTAC	NA	False	NA	16	True	AATAAA	-18	NA	102965667	102975220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967990_102969267_102971474_102971549
ES.22267.193	chr3	+	4493	8	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	5	3	intron_retention	FALSE	canonical	1	4	junction_3	349.519203291304	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTTCCCTACTGCCA	NA	False	NA	21	True	AATAAA	-23	NA	102965668	102975225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102967254_102967351_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.194	chr3	+	4216	6	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	44	junction_2	297.913678772896	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTACTGCCATAGG	NA	False	NA	25	True	AATAAA	-27	NA	102965674	102975229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965757_102966220_102966349_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.195	chr3	+	867	5	NNC	ENSMUSG00000027852.15	novel	663	5	NA	NA	-7	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	352.655905239087	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102965675	102974155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102970133_102974119
ES.22267.197	chr3	+	3885	4	NNC	ENSMUSG00000027852.15	novel	831	6	NA	NA	-7	3	intron_retention	FALSE	canonical	0	0	junction_3	392.583182975985	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTTCCCTACTGCCA	NA	False	NA	21	True	AATAAA	-23	NA	102965675	102975225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965757_102966220_102966349_102967516_102967615_102971647
ES.22267.198	chr3	+	3380	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	60	392	intron_retention	FALSE	canonical	3	20	junction_1	289.564615702034	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965742	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965855_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.199	chr3	+	3391	7	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	71	389	intron_retention	FALSE	canonical	1	5	junction_1	295.116784793184	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAAGTAGGTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	102965753	102974181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965880_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.2	chr3	+	4308	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	12	-2	12	2	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCGCTTTCATTATTG	NA	False	NA	24	True	AATAAA	-27	NA	102927753	102965504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.20	chr3	+	3512	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	166	640	-15	-156	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCGAGTAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927907	102964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.200	chr3	+	2536	7	NNC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	85	-473	intron_retention	FALSE	non_canonical	0	0	junction_1	296.967824669423	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTCTTCTGATCTTG	NA	False	NA	NA	False	CATAAA	-45	NA	102965767	102973319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965901_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.201	chr3	+	3384	7	NNC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	102	392	intron_retention	FALSE	non_canonical	0	0	junction_1	296.967824669423	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965784	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102965901_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.202	chr3	+	2291	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	-20	-641	intron_retention	FALSE	canonical	3	25	junction_1	287.714219708068	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCATTGATTGTTGT	NA	False	NA	19	True	AATAAA	-33	NA	102965889	102973151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965946_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.203	chr3	+	1382	6	ISM	ENSMUSG00000027852.15	ENSMUST00000196355.5	1920	7	-329	1825	-20	252	5prime_fragment	FALSE	canonical	3	741	junction_3	37.2751928231096	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATAATTAGTGTTGCT	NA	False	NA	4	True	CATAAA	-14	NA	102965889	102971967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.204	chr3	+	4634	6	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	300	0	-9	0	3prime_fragment	FALSE	canonical	3	741	junction_3	37.2751928231096	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	False	NA	26	True	AATAAA	-28	NA	102965900	102975230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.205	chr3	+	3312	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	-8	392	intron_retention	FALSE	canonical	3	25	junction_1	287.714219708068	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965901	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102965946_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.206	chr3	+	3484	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	19	392	intron_retention	FALSE	canonical	1	6	junction_1	294.746595494427	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102965930	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102966147_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.207	chr3	+	1257	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	29	252	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	294.746595494427	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATAATTAGTGTTGCT	NA	False	NA	4	True	CATAAA	-14	NA	102965940	102971967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102966147_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.208	chr3	+	4509	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	33	1	intron_retention	FALSE	canonical	1	6	junction_1	294.746595494427	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	False	NA	19	True	AATAAA	-21	NA	102965944	102975223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102966147_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.209	chr3	+	3572	5	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	-20	-654	intron_retention	FALSE	canonical	3	741	junction_2	23.636571240347	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAGAATGTAAAATGC	NA	False	NA	6	True	AATAAA	-20	NA	102966038	102973138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.210	chr3	+	2769	2	NNC	ENSMUSG00000027852.15	novel	832	3	NA	NA	1087	392	intron_retention	FALSE	canonical	0	0	junction_1	0	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102967390	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102970090_102974114
ES.22267.211	chr3	+	6946	1	NIC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	1967	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	682	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTAACTGTATTTTCC	NA	False	NA	12	True	AATAAA	-14	NA	102968270	102975216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102968300_102975200
ES.22267.212	chr3	+	2927	4	ISM	ENSMUSG00000027852.15	ENSMUST00000196355.5	1920	7	3469	-356	3384	356	intron_retention	FALSE	canonical	3	741	junction_1	27.0678160675491	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102969687	102974148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102969850_102970645_102970770_102971431_102971474_102971549
ES.22267.213	chr3	+	2165	4	NNC	ENSMUSG00000027852.15	novel	4470	7	NA	NA	4375	392	intron_retention	FALSE	non_canonical	0	0	junction_3	375.537836531376	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTAGGTCCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	102970678	102974184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102970770_102971431_102971474_102971549_102973446_102974048
ES.22267.214	chr3	+	2129	1	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	6280	1221	5577	217	mono-exon	FALSE	NA	NA	NA	NA	NA	668	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	102971880	102974009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_102971900_102974000
ES.22267.24	chr3	+	4086	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5032.77799465566	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927907	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946142_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.26	chr3	+	6708	19	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-14	-3	intron_retention	FALSE	canonical	0	0	junction_13	5100.26282547173	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACCTAGCGCTTTCAT	NA	False	NA	19	True	AATAAA	-22	NA	102927908	102965499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102953576_102953787_102954242_102954329_102954499_102956943_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.27	chr3	+	3974	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	5734.94098396018	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102927909	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947057_102947104_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952178_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.28	chr3	+	3669	19	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	5120.70422553696	1315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927909	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954335_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.3	chr3	+	3925	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	18	375	18	7	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTTTTTTTAATAAAT	NA	False	NA	NA	False	AATGAA	-1	NA	102927759	102965127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.32	chr3	+	4296	21	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	5358.39471390453	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927909	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.33	chr3	+	3234	21	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	5358.39471390453	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927911	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.34	chr3	+	4928	17	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-11	-7	intron_retention	FALSE	canonical	0	0	junction_10	4750.34526212306	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927911	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.35	chr3	+	3916	21	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	5358.39471390453	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927911	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.37	chr3	+	8379	16	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-7	3	intron_retention	FALSE	canonical	0	0	junction_9	5394.85369341313	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927915	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102953576_102953787_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.39	chr3	+	2884	19	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5144.04850558174	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927916	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954499_102956939_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.4	chr3	+	4198	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-152	-197	29	2	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCGCTTTCATTATTG	NA	False	NA	24	True	AATAAA	-27	NA	102927770	102965504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.42	chr3	+	4500	18	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_11	4679.46481649965	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927916	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.44	chr3	+	3912	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_12	4659.69898354861	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927918	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.48	chr3	+	3926	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5090.26254295128	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927924	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958450_102960223_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.5	chr3	+	3338	16	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-80	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5407.04711772825	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927842	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.50	chr3	+	2832	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5352.96169762946	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927925	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950931_102951002_102951121_102951248_102951944_102952045_102952133_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.51	chr3	+	2980	19	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	4600.35905469331	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927925	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954501_102956943_102957046_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.52	chr3	+	3735	18	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5194.86926611648	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCACCTAGCGCTTTCA	NA	False	NA	18	True	AATAAA	-21	NA	102927925	102965498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102962787_102962829_102963660_102963794_102964201
ES.22267.53	chr3	+	2857	19	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	4600.96803991519	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927925	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102956976_102957667_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.54	chr3	+	3972	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5093.17304382258	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCACCTAGCGCTTTCA	NA	False	NA	18	True	AATAAA	-21	NA	102927925	102965498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946142_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.55	chr3	+	3928	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5012.94929694482	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927925	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936350_102936460_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.56	chr3	+	3834	18	FSM	ENSMUSG00000068823.11	ENSMUST00000199240.5	3457	18	-3	-374	-2	-8	multi-exon	FALSE	canonical	0	0	junction_10	5214.76529411098	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102927925	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.58	chr3	+	2576	16	NIC	ENSMUSG00000068823.11	novel	3457	18	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5407.04711772825	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGCACAGTTGCAGCCT	NA	False	NA	28	True	AATAAA	-24	NA	102927925	102964444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.59	chr3	+	5176	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	4669.20516142803	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927925	102965502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.6	chr3	+	3059	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-68	858	-68	1	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGCAGCCTGGAAA	NA	False	NA	33	True	AATAAA	-29	NA	102927854	102964449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.61	chr3	+	4797	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_11	4669.20516142803	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927925	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.63	chr3	+	4135	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5658.75152190866	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927926	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947057_102947104_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951893_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.64	chr3	+	3671	19	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5102.37297614103	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927926	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948445_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.66	chr3	+	6456	15	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_9	4961.98433603134	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927926	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.68	chr3	+	4225	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5126.72461246726	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927926	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102929936_102930124_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.69	chr3	+	4117	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5023.41071186255	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	False	NA	14	True	AATAAA	-17	NA	102927926	102965494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947842_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.7	chr3	+	3866	20	FSM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	-60	379	-54	3	multi-exon	FALSE	canonical	0	0	junction_12	5440.27575987562	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	102927868	102965123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.70	chr3	+	4947	18	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-1	-6	intron_retention	FALSE	non_canonical	0	0	junction_10	5188.63421768992	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGCACCTAGCGCTTT	NA	False	NA	16	True	AATAAA	-19	NA	102927926	102965496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102952074_102952158_102954100_102954242_102954329_102954495_102956936_102957046_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.71	chr3	+	5016	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_12	5104.79643250188	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927926	102965502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951893_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.72	chr3	+	5080	18	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_10	4688.69427452889	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927926	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.74	chr3	+	3695	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5012.94929694482	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927926	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201_102965132_102965475
ES.22267.78	chr3	+	4963	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_12	4659.69898354861	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927926	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.80	chr3	+	3707	19	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5101.85602544025	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATCCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927926	102965118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951893_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.82	chr3	+	4032	18	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_10	4688.69427452889	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAGTTGCAGCCTGGAA	NA	False	NA	32	True	AATAAA	-28	NA	102927926	102964448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954499_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.83	chr3	+	4583	19	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_12	4659.69898354861	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927926	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.86	chr3	+	4044	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5104.04878654506	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTAGCGCTTTCATTA	NA	False	NA	21	True	AATAAA	-24	NA	102927927	102965501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952164_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.87	chr3	+	4039	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5114.45645229961	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGCACCTAGCGCTTT	NA	False	NA	16	True	AATAAA	-19	NA	102927927	102965496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960254_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.9	chr3	+	3439	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-39	449	-39	-160	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCTTCCCGAGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	102927883	102964858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.90	chr3	+	3344	17	NNC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5266.8714500255	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927930	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960281_102963660_102963794_102964201
ES.22267.92	chr3	+	3091	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	5023.0798362709	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGCACAGTTGCAG	NA	False	NA	25	True	AATAAA	-21	NA	102927931	102964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963636_102963794_102964201
ES.22267.93	chr3	+	4240	20	FSM	ENSMUSG00000027852.15_ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	190	-112	3	112	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCGCCTAGTGATTACG	NA	False	NA	NA	False	NA	NA	NA	102927931	102965614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.94	chr3	+	4169	21	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	5280.7401706579	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCACCTAGCGCTTTC	NA	False	NA	17	True	AATAAA	-20	NA	102927931	102965497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947057_102947104_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.95	chr3	+	5903	17	NIC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_10	4769.2936547086	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927935	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102963794_102964201
ES.22267.96	chr3	+	3965	18	NIC	ENSMUSG00000068823.11	novel	3849	19	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	4667.26386729103	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	102927937	102965120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22267.97	chr3	+	4072	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5364.53050148706	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTAGCGCTTTCATT	NA	False	NA	20	True	AATAAA	-23	NA	102927938	102965500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947057_102947104_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ES.22268.1	chr3	-	3549	18	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.470588235294118	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAGCGAGAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	102965360	102936393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102946205_102947246_102947357_102948458_102948559_102950472_102950553_102950870_102951002_102951121_102951245_102951941_102952157_102954099_102954242_102954329_102954493_102956934_102957043_102957611_102957784_102958349_102958467_102960125_102960246_102961968_102962147_102962661_102962826_102963658_102963793_102964200
ES.22268.11	chr3	-	178	1	Intergenic	novelGene_18363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102953790	102953612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102953600_102953800
ES.22268.2	chr3	-	3429	19	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.458122847290851	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGAGCGAGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	102965149	102936395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102946205_102947246_102947359_102947756_102947848_102948458_102948559_102950472_102950553_102950870_102951002_102951121_102951245_102951941_102952157_102954099_102954242_102954329_102954493_102956934_102957043_102957611_102957784_102958349_102958467_102960125_102960246_102961968_102962147_102962661_102962826_102963658_102963793_102964200
ES.22268.3	chr3	-	1753	4	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAGAGCGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	102950645	102936397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102947357_102948458_102948559_102950472
ES.22268.4	chr3	-	2625	18	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	102964439	102936402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102946205_102947246_102947357_102948458_102948559_102950472_102950553_102950870_102951002_102951121_102951245_102951941_102952157_102954099_102954242_102954329_102954493_102956934_102957043_102957611_102957784_102958349_102958467_102960125_102960246_102961968_102962147_102962661_102962826_102963652_102963793_102964200
ES.22268.5	chr3	-	4732	2	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102950645	102936434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005
ES.22268.6	chr3	-	3393	15	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAAGA	2457	False	NA	NA	False	NA	NA	NA	102961673	102936434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102946205_102947246_102947359_102947756_102947848_102948458_102948559_102950472_102950553_102950870_102951002_102951121_102951245_102951941_102952157_102954099_102954242_102954329_102954493_102956934_102957043_102957611_102957784_102958349_102958467_102960125
ES.22268.8	chr3	-	3298	18	Antisense	novelGene_ENSMUSG00000068823.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.470588235294118	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102965149	102936434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102936527_102946005_102946208_102947246_102947357_102948458_102948559_102950472_102950553_102950870_102951002_102951121_102951245_102951941_102952157_102954099_102954242_102954329_102954493_102956934_102957043_102957611_102957789_102958355_102958467_102960125_102960246_102961968_102962147_102962661_102962826_102963658_102963793_102964201
ES.22269.1	chr3	-	4414	1	Antisense	novelGene_ENSMUSG00000027852.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGAGTTATGAGGTT	NA	False	NA	NA	False	AAAACA	-4	NA	102971636	102967222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102967200_102971600
ES.22269.2	chr3	-	4313	2	Antisense	novelGene_ENSMUSG00000027852.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102971636	102967247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_102971472_102971547
ES.2227.1	chr1	+	4144	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	-18	-13	-18	13	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGAGTACTGGTTCTATC	NA	False	NA	NA	False	AATAAA	-23	NA	192835400	192854344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
ES.2227.10	chr1	+	3625	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	25	-1393	19	-139	multi-exon	FALSE	canonical	3	16	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGGACATGCCTCTCT	986	False	NA	12	True	NA	NA	NA	192855912	192860001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856089_192856552
ES.2227.11	chr1	+	3479	2	NNC	ENSMUSG00000079144.8	novel	3782	2	NA	NA	19	-137	intron_retention	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGACATGCCTCTCTTC	986	False	NA	14	True	NA	NA	NA	192855912	192860003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_192855941_192856552
ES.2227.12	chr1	+	4085	2	FSM	ENSMUSG00000079144.8	ENSMUST00000193307.2	705	2	-137	-3243	21	6	multi-exon	FALSE	canonical	3	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAGCAGTTAATGTGT	988	False	NA	NA	False	AATAAA	-25	NA	192855914	192860146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856406_192856552
ES.2227.13	chr1	+	2667	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	35	-445	29	445	multi-exon	FALSE	canonical	3	16	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCACCACCACCACCAC	996	False	NA	NA	False	AAGAAA	-9	NA	192855922	192859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856089_192856552
ES.2227.2	chr1	+	1964	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	1	2148	1	386	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTGACTCGATTATT	NA	False	NA	NA	False	NA	NA	NA	192835419	192852183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
ES.2227.3	chr1	+	3507	7	NNC	ENSMUSG00000026638.16	novel	4113	8	NA	NA	3	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.9256958799989	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGAGTACTGGTTCTATC	NA	False	NA	NA	False	AATAAA	-23	NA	192835421	192854344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192849814_192851760
ES.2227.4	chr1	+	4714	7	ISM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	42	3	-1	-3	intron_retention	FALSE	canonical	3	26	junction_1	3.95811402901264	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAATATAAAGCTA	NA	False	NA	NA	False	AATAAA	-7	NA	192835460	192854328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824
ES.2227.5	chr1	+	4895	3	NIC	ENSMUSG00000026638.16	novel	4113	8	NA	NA	-1998	5670	intron_retention	FALSE	canonical	1	1	junction_2	16.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGGACATGCCTCTCT	7126	False	NA	12	True	NA	NA	NA	192848812	192860001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_192850140_192850824_192850944_192856552
ES.2227.6	chr1	+	2579	2	FSM	ENSMUSG00000079144.8	ENSMUST00000193307.2	705	2	-177	-1697	-10	-6	multi-exon	FALSE	canonical	3	3	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACCAAATGTCCTGAA	948	False	NA	NA	False	AATAAA	-9	NA	192855874	192858600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856406_192856552
ES.2227.7	chr1	+	3812	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	-5	-1550	-2	18	multi-exon	FALSE	canonical	3	16	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTTTACTAAATATT	956	False	NA	NA	False	AATAAA	-37	NA	192855882	192860158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856089_192856552
ES.2227.8	chr1	+	2252	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	5	0	-1	0	multi-exon	FALSE	canonical	3	16	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCTGAAATCATTTG	966	False	NA	NA	False	AATAAA	-17	NA	192855892	192858608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192856089_192856552
ES.2227.9	chr1	+	4106	1	NIC	ENSMUSG00000079144.8	novel	3793	3	NA	NA	0	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGAGGACATGCCTCT	967	False	NA	10	True	NA	NA	NA	192855893	192859999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_192855900_192860000
ES.22270.1	chr3	+	2991	2	Genic_Genomic	ENSMUSG00000104671.2	novel	1319	1	NA	NA	-1742	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTAGTGTCCGTGTCTGC	NA	False	NA	NA	False	NA	NA	NA	102976747	102979806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_102977383_102977450
ES.22271.1	chr3	-	139	1	Intergenic	novelGene_18364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCATGAA	NA	False	NA	NA	False	NA	NA	NA	102978472	102978333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102978300_102978500
ES.22272.1	chr3	+	2490	13	NNC	ENSMUSG00000070385.13	novel	751	6	NA	NA	-7525	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.83749851296674	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACACCGCGAGTGGGT	9677	False	NA	NA	False	AATAAA	-12	NA	102993569	103007030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_102993869_102994149_102994628_102995632_102995853_102997360_102997491_102998459_102998655_102998932_102999065_102999616_102999781_103001715_103001843_103002029_103002194_103002957_103003079_103005985_103006160_103006341_103006453_103006855
ES.22273.1	chr3	-	283	1	Intergenic	novelGene_18365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAGGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	102994141	102993858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_102993900_102994100
ES.22274.1	chr3	+	5478	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-582	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	64.9416879939702	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGTGTAGTGGTTACT	NA	False	NA	NA	False	TTTAAA	-44	NA	103009337	103077093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103009893_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.10	chr3	+	3904	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGGTGTTTACAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	103009964	103075984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.100	chr3	+	1091	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-22	336	1	3	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5024	False	NA	51	True	AATAAA	-19	NA	103079065	103086146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.102	chr3	+	3918	4	NIC	ENSMUSG00000005687.15	novel	3878	5	NA	NA	1	3	intron_retention	FALSE	canonical	3	3803	junction_3	91.8924492122297	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5024	False	NA	51	True	AATAAA	-19	NA	103079065	103086146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079357_103080590_103080662_103081655_103084736_103085670
ES.22274.103	chr3	+	1412	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-22	15	1	-1	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAATATGT	5024	False	NA	NA	False	NA	NA	NA	103079065	103086467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.104	chr3	+	2165	6	NIC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	3786	junction_4	89.7850767109991	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5024	False	NA	49	True	AATAAA	-17	NA	103079065	103086144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103082986_103084654_103084736_103085670
ES.22274.105	chr3	+	3649	5	FSM	ENSMUSG00000005687.15	ENSMUST00000136937.8	3878	5	47	182	1	-182	multi-exon	FALSE	canonical	3	3803	junction_1	91.1564589044572	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGGTTTTCAGAAT	5024	False	NA	13	True	AATAAA	-31	NA	103079065	103085959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103084736_103085670
ES.22274.107	chr3	+	2246	5	NIC	ENSMUSG00000005687.15	novel	737	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	3786	junction_3	94.9641379679719	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5024	False	NA	48	True	AATAAA	-16	NA	103079065	103086143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079357_103080590_103080662_103081655_103082986_103084654_103084736_103085670
ES.22274.108	chr3	+	2801	5	NIC	ENSMUSG00000005687.15	novel	2717	6	NA	NA	1	3	intron_retention	FALSE	canonical	3	3472	junction_3	203.950208384301	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	5024	False	NA	51	True	AATAAA	-19	NA	103079065	103086146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103084736_103085670
ES.22274.109	chr3	+	904	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-22	523	1	-182	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGGTTTTCAGAAT	5024	False	NA	13	True	AATAAA	-31	NA	103079065	103085959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.11	chr3	+	4765	18	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.4018384704003	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009969	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064241_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.110	chr3	+	4770	4	ISM	ENSMUSG00000005687.15	ENSMUST00000139489.8	2717	6	1	-2	1	2	intron_retention	FALSE	canonical	3	3803	junction_1	91.8924492122297	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGGCTATAGTG	5024	False	NA	50	True	AATAAA	-18	NA	103079065	103086145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655
ES.22274.111	chr3	+	1167	6	NIC	ENSMUSG00000005687.15	novel	1405	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	101	junction_1	1461.34417575053	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5027	False	NA	48	True	AATAAA	-16	NA	103079068	103086143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.112	chr3	+	4845	3	FSM	ENSMUSG00000005687.15	ENSMUST00000147042.2	535	3	-29	-4281	-6	1	multi-exon	FALSE	canonical	3	3888	junction_2	69	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	5030	False	NA	49	True	AATAAA	-17	NA	103079071	103086144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079357_103080590_103080662_103081655
ES.22274.113	chr3	+	1030	7	NNC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	1439.45623413843	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5030	False	NA	48	True	AATAAA	-16	NA	103079071	103086143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081807_103082934_103082986_103084654_103084736_103085670
ES.22274.114	chr3	+	3714	4	NIC	ENSMUSG00000005687.15	novel	3878	5	NA	NA	2	-185	intron_retention	FALSE	canonical	3	3803	junction_3	91.8924492122297	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAACCTGGTTTTCAG	5038	False	NA	10	True	AATAAA	-28	NA	103079079	103085956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079357_103080590_103080662_103081655_103084736_103085670
ES.22274.115	chr3	+	2706	6	FSM	ENSMUSG00000005687.15	ENSMUST00000139489.8	2717	6	15	-4	2	4	multi-exon	FALSE	canonical	3	3472	junction_4	182.433111029769	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTGGCTATAGTGAA	5038	False	NA	52	True	AATAAA	-20	NA	103079079	103086147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103084736_103085670
ES.22274.116	chr3	+	3032	6	FSM	ENSMUSG00000005687.15	ENSMUST00000139489.8	2717	6	21	-336	-2	-3	multi-exon	FALSE	canonical	3	3472	junction_4	182.433111029769	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTCATTTTAAT	5044	False	NA	NA	False	NA	NA	NA	103079085	103086479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103084736_103085670
ES.22274.117	chr3	+	510	4	NNC	ENSMUSG00000005687.15	novel	1405	7	NA	NA	2671	-182	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1787.81511596946	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGGTTTTCAGAAT	7730	False	NA	13	True	AATAAA	-31	NA	103081771	103085959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103081818_103082891_103082986_103084654_103084736_103085670
ES.22274.118	chr3	+	913	3	ISM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	3846	32	3833	-18	3prime_fragment	FALSE	canonical	3	3786	junction_1	8.5	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	8892	False	NA	NA	False	NA	NA	NA	103082933	103086450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103082986_103084654_103084736_103085670
ES.22274.119	chr3	+	436	1	Genic_Genomic	ENSMUSG00000005687.15	novel	NA	NA	NA	NA	7109	163	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAAGAGGCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	103086209	103086645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_103086200_103086600
ES.22274.120	chr3	+	178	1	Intergenic	novelGene_18371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	7217	False	NA	NA	False	NA	NA	NA	103097452	103097630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103097500_103097600
ES.22274.13	chr3	+	3920	13	NIC	ENSMUSG00000007379.16	novel	3060	12	NA	NA	-5	2	intron_retention	FALSE	canonical	3	218	junction_1	21.4571601621049	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAATAATTTACAACT	NA	False	NA	NA	False	NA	NA	NA	103009970	103065836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117
ES.22274.14	chr3	+	3792	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	-97	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACACGTGTCCTGCTGGG	NA	False	NA	NA	False	AAAAAG	-24	NA	103009975	103075883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.15	chr3	+	5355	12	NIC	ENSMUSG00000007379.16	novel	3060	12	NA	NA	2	-30	intron_retention	FALSE	canonical	3	218	junction_1	22.2836707808896	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103009977	103065804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103063497_103064117
ES.22274.16	chr3	+	4918	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_14	63.9476429437574	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009978	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.17	chr3	+	2021	3	ISM	ENSMUSG00000007379.16	ENSMUST00000166143.9	3060	12	3	23092	3	-23092	5prime_fragment	FALSE	canonical	3	218	junction_1	21.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTAATATGAGTAAGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	103009978	103041496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103010055_103038668_103039648_103040530
ES.22274.2	chr3	+	5062	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-525	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	62.5397651276548	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009394	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103009573_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.20	chr3	+	4855	17	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	88.3740054753093	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103009989	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.21	chr3	+	5237	21	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.145355278572	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103009989	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103016320_103016452_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103055866_103056031_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.22	chr3	+	5589	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	14	609	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATCTGATCACAGCCT	NA	False	NA	NA	False	NA	NA	NA	103009989	103077694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.24	chr3	+	5081	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.7493622582904	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009998	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103034825_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.25	chr3	+	3817	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	23	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_14	63.9476429437574	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGCTATCTGAGTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	103009998	103075973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.26	chr3	+	4963	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	66.6112732830942	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009999	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063331_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.27	chr3	+	4874	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	66.7046188268811	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010000	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075143
ES.22274.29	chr3	+	5241	22	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.260553177831	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010001	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103016320_103016452_103034919_103034967_103036686_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.3	chr3	+	9792	17	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-523	0	intron_retention	FALSE	canonical	1	5	junction_1	66.6668196612828	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103009396	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103009893_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.30	chr3	+	4590	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	28	-338	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGAGTCTGTCCTTTC	NA	False	NA	NA	False	AATATA	-26	NA	103010003	103076709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.31	chr3	+	4096	25	Fusion	ENSMUSG00000005687.15_ENSMUSG00000007379.16	novel	4879	18	NA	NA	31	6	multi-exon	FALSE	canonical	0	0	junction_19	1439.92188674614	1242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGCTATAGTGAACT	NA	False	NA	54	True	AATAAA	-22	NA	103010006	103086149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086_103075282_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.32	chr3	+	3594	18	FSM	ENSMUSG00000007379.16	ENSMUST00000173206.8	4879	18	87	1198	31	-93	multi-exon	FALSE	canonical	2	18	junction_4	64.3554145131754	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGCTGGGATAG	NA	False	NA	NA	False	AAAAAG	-28	NA	103010006	103075887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.33	chr3	+	9113	15	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_6	71.3198100538865	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010010	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.34	chr3	+	4684	18	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.632830561855	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010010	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010051_103038668_103039648_103040530_103040666_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103073728_103073816_103075086
ES.22274.37	chr3	+	3157	14	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	37	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.6051355296039	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103010012	103065804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040666_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959
ES.22274.38	chr3	+	3919	25	Fusion	ENSMUSG00000005687.15_ENSMUSG00000007379.16	novel	4879	18	NA	NA	39	-161	multi-exon	FALSE	canonical	0	0	junction_19	1439.92188674614	1240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGACTTTAGAATAATT	NA	False	NA	34	True	TATAAA	-19	NA	103010014	103085980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086_103075282_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.39	chr3	+	5649	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	43	5	intron_retention	FALSE	canonical	3	218	junction_1	24.0141250244943	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGATGTGTAGTGGTT	NA	False	NA	NA	False	TTTAAA	-41	NA	103010018	103077090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.40	chr3	+	5434	17	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	44	0	intron_retention	FALSE	canonical	2	18	junction_4	66.1606709080251	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010019	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.41	chr3	+	4707	17	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	67.4637634215584	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTCCCACAGATC	NA	False	NA	NA	False	GATAAA	-8	NA	103010020	103077046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103070289_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.42	chr3	+	4657	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.0363723196225	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010026	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010036_103038904_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.43	chr3	+	3313	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	52	-524	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTGCTGAGATCAAAGG	NA	False	NA	NA	False	NA	NA	NA	103010027	103075456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.45	chr3	+	5160	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	64.7229613691699	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010042	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010319_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.46	chr3	+	4994	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	63.8487796803249	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010050	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010161_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.47	chr3	+	5357	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	102.376348179971	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010056	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010543_103038668_103039648_103040532_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065134_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.48	chr3	+	5145	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	NA	False	NA	NA	False	GATAAA	-9	NA	103010057	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010326_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.49	chr3	+	4793	20	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	85.7870519516114	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103010058	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010319_103038668_103038711_103039061_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.5	chr3	+	5065	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	-7	8	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGTGTAGTGGTTACT	NA	False	NA	NA	False	TTTAAA	-44	NA	103009912	103077093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.50	chr3	+	4942	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	321	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTCCCACAGATC	NA	False	NA	NA	False	GATAAA	-8	NA	103010296	103077046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010363_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.51	chr3	+	5028	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	8736	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	65.1604856403702	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103018711	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103018856_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.52	chr3	+	250	1	Intergenic	novelGene_18366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGTTTTCAGAGCTA	3096	False	NA	NA	False	NA	NA	NA	103023710	103023960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103023700_103024000
ES.22274.53	chr3	+	5512	1	Intergenic	novelGene_18367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6800	False	NA	NA	False	NA	NA	NA	103027414	103032926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103027400_103032900
ES.22274.54	chr3	+	4973	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-3676	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	65.3793535953302	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	1041	False	NA	NA	False	GATAAA	-16	NA	103031195	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103031285_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.55	chr3	+	4941	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-3156	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	1561	False	NA	NA	False	GATAAA	-16	NA	103031715	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103031773_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.56	chr3	+	5145	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	-165	-1	-165	1	multi-exon	FALSE	canonical	2	20	junction_1	61.6686686361723	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGATCTCTTGGAGA	4552	False	NA	NA	False	GATAAA	-17	NA	103034706	103077055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.57	chr3	+	5260	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-165	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5305415794838	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4552	False	NA	NA	False	GATAAA	-16	NA	103034706	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034967_103036402_103036519_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.58	chr3	+	4890	18	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-163	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	87.539254664787	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGATCTCTTGGAGAA	4554	False	NA	NA	False	GATAAA	-18	NA	103034708	103077056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034884_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.59	chr3	+	5500	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-113	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5305415794838	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGATCTCTTGGAGAA	4604	False	NA	NA	False	GATAAA	-18	NA	103034758	103077056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034967_103036406_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.60	chr3	+	5042	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-107	41327	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	85.9351040335855	1278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAACAAAACCAAAACAAA	4610	False	NA	NA	False	NA	NA	NA	103034764	103118412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034884_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086_103077056_103118374
ES.22274.61	chr3	+	4843	18	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.3523145587555	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4656	False	NA	NA	False	GATAAA	-16	NA	103034810	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034941_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.62	chr3	+	4954	19	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	64.9416879939702	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGATCTCTTGGAGA	4660	False	NA	NA	False	GATAAA	-17	NA	103034814	103077055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034884_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.63	chr3	+	5105	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5305415794838	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4691	False	NA	NA	False	GATAAA	-16	NA	103034845	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034941_103036686_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.64	chr3	+	3925	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	-24	1078	-24	-4	multi-exon	FALSE	canonical	2	20	junction_1	61.6686686361723	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTATCTGAGTTTTGGTG	4693	False	NA	NA	False	ATTAAA	-18	NA	103034847	103075976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.65	chr3	+	5125	20	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.3805918490922	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCCACAGATCTCTTG	4694	False	NA	NA	False	GATAAA	-13	NA	103034848	103077051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034967_103036686_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.66	chr3	+	4976	19	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4694	False	NA	NA	False	GATAAA	-16	NA	103034848	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103034941_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.67	chr3	+	4831	18	NIC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_4	85.1510361765358	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4694	False	NA	NA	False	GATAAA	-16	NA	103034848	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.68	chr3	+	3953	13	ISM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	-22	11218	-22	2	intron_retention	FALSE	canonical	2	20	junction_1	71.5465563267878	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAATAATTTACAACT	4695	False	NA	NA	False	NA	NA	NA	103034849	103065836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117
ES.22274.69	chr3	+	4937	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	376	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	5093	False	NA	NA	False	GATAAA	-16	NA	103035247	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103035301_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.7	chr3	+	4818	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_13	65.2813978071394	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009942	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.70	chr3	+	5255	20	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	860	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5305415794838	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	5577	False	NA	NA	False	GATAAA	-16	NA	103035731	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103035996_103036705_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.71	chr3	+	5119	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	881	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.0363723196225	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTCCCACAGATC	5598	False	NA	NA	False	GATAAA	-8	NA	103035752	103077046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103035996_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.72	chr3	+	5828	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	933	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	88.9011970645287	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	5650	False	NA	NA	False	GATAAA	-9	NA	103035804	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103036813_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075143
ES.22274.73	chr3	+	4879	18	ISM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	3795	7	3795	0	3prime_fragment	FALSE	canonical	3	248	junction_3	19.8124423525298	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	8512	False	NA	NA	False	GATAAA	-9	NA	103038666	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.74	chr3	+	4871	18	NNC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	3795	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.3547793930656	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTCCCACAGATC	8512	False	NA	NA	False	GATAAA	-8	NA	103038666	103077046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103039648_103040530_103040662_103041056_103041168_103044458_103044630_103048374_103048477_103053837_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.75	chr3	+	6182	16	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	3795	0	intron_retention	FALSE	canonical	2	18	junction_3	67.5457375906627	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	8512	False	NA	NA	False	GATAAA	-9	NA	103038666	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.76	chr3	+	3908	17	ISM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	5656	0	5656	0	3prime_fragment	FALSE	canonical	3	248	junction_2	20.064641630241	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103040527	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.77	chr3	+	3143	5	NNC	ENSMUSG00000007379.16	novel	3060	12	NA	NA	6194	-30	intron_retention	FALSE	non_canonical	0	0	junction_3	117.252665214911	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103041065	103065804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103041168_103044458_103044630_103048374_103048405_103062343_103063497_103064117
ES.22274.79	chr3	+	3887	16	NNC	ENSMUSG00000007379.16	novel	2626	15	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.497483778285	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	3973	False	NA	NA	False	GATAAA	-9	NA	103047607	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103047848_103048374_103048472_103053827_103053873_103055866_103056031_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.8	chr3	+	4811	18	FSM	ENSMUSG00000007379.16	ENSMUST00000173206.8	4879	18	37	31	-19	0	multi-exon	FALSE	canonical	2	18	junction_4	64.3554145131754	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009956	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.82	chr3	+	3405	13	ISM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	18944	0	-2664	0	3prime_fragment	FALSE	canonical	3	248	junction_12	20.6780882417436	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4154	False	NA	NA	False	GATAAA	-16	NA	103053815	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.83	chr3	+	8967	2	NNC	ENSMUSG00000007379.16	novel	1482	7	NA	NA	-978	-30	intron_retention	FALSE	non_canonical	0	0	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5840	False	NA	NA	False	NA	NA	NA	103055501	103065804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103062360_103063695
ES.22274.84	chr3	+	4019	12	ISM	ENSMUSG00000007379.16	ENSMUST00000173037.8	3578	14	7395	0	-801	0	3prime_fragment	FALSE	canonical	3	248	junction_11	21.2357876634221	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	6017	False	NA	NA	False	GATAAA	-9	NA	103055678	103077047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.85	chr3	+	5861	10	NIC	ENSMUSG00000007379.16	novel	4979	19	NA	NA	-469	0	intron_retention	FALSE	canonical	3	248	junction_9	23.4683921924525	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	6349	False	NA	NA	False	GATAAA	-16	NA	103056010	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103056539_103059608_103059719_103060952_103061023_103061803_103063497_103064117_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.86	chr3	+	4106	2	NIC	ENSMUSG00000007379.16	novel	1482	7	NA	NA	4598	-30	intron_retention	FALSE	canonical	3	274	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2352	False	NA	NA	False	NA	NA	NA	103061077	103065804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103063497_103064117
ES.22274.87	chr3	+	4649	1	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	4708	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAATAATTTACAACT	2462	False	NA	NA	False	NA	NA	NA	103061187	103065836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103061200_103065800
ES.22274.88	chr3	+	1141	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	7	319	7	6	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGCTATAGTGAACT	4936	False	NA	54	True	AATAAA	-22	NA	103078977	103086149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.89	chr3	+	960	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	42	465	-6	-138	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTTTGTAGCAGAATT	4971	False	NA	57	True	TATAAA	-42	NA	103079012	103086003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.9	chr3	+	5002	19	NNC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	66.3853555545104	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009964	103077054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059580_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ES.22274.90	chr3	+	3885	5	FSM	ENSMUSG00000005687.15	ENSMUST00000136937.8	3878	5	1	-8	1	6	multi-exon	FALSE	canonical	3	3803	junction_1	91.1564589044572	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGCTATAGTGAACT	4978	False	NA	54	True	AATAAA	-22	NA	103079019	103086149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103084736_103085670
ES.22274.91	chr3	+	1445	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	50	-28	2	14	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGGTGTGGGTATAT	4979	False	NA	NA	False	NA	NA	NA	103079020	103086496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.92	chr3	+	1172	6	FSM	ENSMUSG00000005687.15	ENSMUST00000155520.8	737	6	-52	-383	7	3	multi-exon	FALSE	canonical	3	3472	junction_3	182.474107752306	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTGGCTATAGTGA	4984	False	NA	51	True	AATAAA	-19	NA	103079025	103086146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ES.22274.93	chr3	+	2017	6	NIC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	7	-185	intron_retention	FALSE	canonical	3	3786	junction_4	89.7850767109991	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAACCTGGTTTTCAG	4984	False	NA	10	True	AATAAA	-28	NA	103079025	103085956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103082986_103084654_103084736_103085670
ES.22274.94	chr3	+	2798	6	NIC	ENSMUSG00000005687.15	novel	1405	7	NA	NA	7	1	intron_retention	FALSE	canonical	3	101	junction_2	1463.16432433271	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTGGCTATAGT	4984	False	NA	49	True	AATAAA	-17	NA	103079025	103086144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103084736_103085670
ES.22274.96	chr3	+	1075	7	NNC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1424.08868520655	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5010	False	NA	48	True	AATAAA	-16	NA	103079051	103086143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085656
ES.22274.97	chr3	+	1014	6	NIC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	-11	6	combination_of_known_splicesites	FALSE	canonical	3	33	junction_4	1540.95848094619	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGCTATAGTGAACT	5012	False	NA	54	True	AATAAA	-22	NA	103079053	103086149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103084654_103084736_103085670
ES.22274.98	chr3	+	4171	5	FSM	ENSMUSG00000005687.15	ENSMUST00000136937.8	3878	5	35	-328	-11	1	multi-exon	FALSE	canonical	3	3803	junction_1	91.1564589044572	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATGTTT	5012	False	NA	NA	False	NA	NA	NA	103079053	103086469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103084736_103085670
ES.22275.1	chr3	-	354	2	Antisense	novelGene_ENSMUSG00000007379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTTTGTGAAAATCTA	NA	False	NA	NA	False	AATAAA	-15	NA	103029341	103026115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_103026360_103029231
ES.22275.2	chr3	-	3565	1	Intergenic	novelGene_18368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGAAAGAGA	7828	False	NA	NA	False	NA	NA	NA	103032186	103028621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103028600_103032200
ES.22276.1	chr3	-	177	1	Intergenic	novelGene_18369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	103092081	103091904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103091900_103092100
ES.22277.1	chr3	-	179	1	Intergenic	novelGene_18370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCATAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	103095629	103095450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103095400_103095600
ES.22278.1	chr3	-	4444	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-1644	2284	intron_retention	TRUE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103107935	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105861_103106094
ES.22278.10	chr3	-	2872	3	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20561	2276	intron_retention	TRUE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATATGGTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	103126852	103103265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106004_103106082_103106156_103126791
ES.22278.11	chr3	-	951	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20565	116	intron_retention	FALSE	canonical	3	15	junction_1	0	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTTGCAATTTTAT	NA	False	NA	-24	True	NA	NA	NA	103126856	103105425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106313_103126792
ES.22278.12	chr3	-	1198	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20353	116	intron_retention	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTTGCAATTTTAT	NA	False	NA	-24	True	NA	NA	NA	103126644	103105425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106413_103126433
ES.22278.13	chr3	-	722	3	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20567	116	intron_retention	FALSE	non_canonical	0	0	junction_1	13.5	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTTGCAATTTTAT	NA	False	NA	-24	True	NA	NA	NA	103126858	103105425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105688_103106160_103126792
ES.22278.14	chr3	-	683	4	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20548	96	intron_retention	TRUE	non_canonical	0	0	junction_1	3.29983164553722	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAAGACGCACAGTT	NA	False	NA	-44	True	NA	NA	NA	103126839	103105445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105688_103105923_103106078_103106316_103126792
ES.22278.15	chr3	-	598	3	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20557	2	intron_retention	FALSE	non_canonical	0	0	junction_1	13.5	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCGTCCCAGGTTTCT	NA	False	NA	-1	True	NA	NA	NA	103126848	103105539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105688_103106160_103126792
ES.22278.17	chr3	-	557	4	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20555	1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCCGTCCCAGGTTTC	NA	False	NA	-2	True	NA	NA	NA	103126846	103105540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105649_103106001_103106074_103106156_103126791
ES.22278.18	chr3	-	1268	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20539	0	intron_retention	FALSE	canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTCCGTCCCAGGTTT	NA	False	NA	-3	True	NA	NA	NA	103126830	103105541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106413_103126433
ES.22278.19	chr3	-	1566	1	Intergenic	novelGene_18372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCCTGGATCAAAGAGG	NA	False	NA	NA	False	AATACA	-19	NA	103126859	103125293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103125300_103126900
ES.22278.2	chr3	-	3487	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20571	2284	intron_retention	FALSE	canonical	1	2	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103126862	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106316_103126433
ES.22278.3	chr3	-	3219	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20565	2284	intron_retention	FALSE	canonical	3	11	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103126856	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106413_103126792
ES.22278.4	chr3	-	3114	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-8916	2284	intron_retention	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103115207	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106316_103115151
ES.22278.5	chr3	-	3214	3	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20532	2284	intron_retention	TRUE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103126823	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105688_103106160_103126433
ES.22278.6	chr3	-	2905	3	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20582	2284	intron_retention	FALSE	non_canonical	0	0	junction_1	13.5	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103126873	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103105611_103105688_103106160_103126792
ES.22278.7	chr3	-	3125	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20568	2284	intron_retention	FALSE	canonical	3	7	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTTTCTATCTGCAA	NA	False	NA	NA	False	AATAAA	-23	NA	103126859	103103257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103106316_103126792
ES.22279.1	chr3	-	163	1	Intergenic	novelGene_18373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	103139318	103139155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103139200_103139300
ES.2228.1	chr1	-	182	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAACAAAAAGAAAAAAA	8106	False	NA	NA	False	NA	NA	NA	192847794	192847612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192847600_192847800
ES.22280.1	chr3	-	179	1	Intergenic	novelGene_18374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103142742	103142563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103142600_103142700
ES.22281.1	chr3	-	179	1	Intergenic	novelGene_18375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATACATACAG	NA	False	NA	NA	False	NA	NA	NA	103181507	103181328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103181300_103181500
ES.22282.1	chr3	+	5562	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	100	3213	100	0	multi-exon	TRUE	canonical	3	95	junction_7	11.658340255239	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTTGGGTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	103186708	103262878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.10	chr3	+	5219	20	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	27.8073108623636	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTTTGGGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	103187038	103262877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244836_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.11	chr3	+	8295	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	431	149	-155	-149	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGCTGCCTGTAAATA	NA	False	NA	NA	False	AATAAA	-32	NA	103187039	103265942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.12	chr3	+	4615	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-149	559	-149	-559	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGCTTATTATTGAA	NA	False	NA	NA	False	AATAGA	-25	NA	103187045	103262319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.13	chr3	+	3712	7	ISM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-149	27109	-149	-706	intron_retention	FALSE	canonical	3	101	junction_1	9.85590629464835	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	103187045	103235769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403
ES.22282.14	chr3	+	4040	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	438	4397	-148	455	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCATTTTCTCTCATT	NA	False	NA	NA	False	ACTAAA	-17	NA	103187046	103261694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.15	chr3	+	4060	20	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-141	462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.0924473047093	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTCTCATTTTGATCT	NA	False	NA	NA	False	ACTAAA	-24	NA	103187053	103261701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237581_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.16	chr3	+	5009	19	NIC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-137	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	28.0851878715058	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGATTCCTTTGGGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	103187057	103262872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.18	chr3	+	8183	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-107	-3051	-107	-162	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTTATTTAATACATTAG	NA	False	NA	NA	False	AATAAA	-19	NA	103187087	103265929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.19	chr3	+	6469	17	NIC	ENSMUSG00000033014.13	novel	5025	19	NA	NA	-107	-6	intron_retention	FALSE	canonical	2	3	junction_10	29.611811410314	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGATTCCTTTGGGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	103187087	103262872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318
ES.22282.2	chr3	+	5219	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-195	1	-195	-1	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTTTGGGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	103186999	103262877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.20	chr3	+	5244	21	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-106	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	35.4830593382251	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCTTTGGGTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	103187088	103262876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103235949_103236014_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.21	chr3	+	4960	18	NIC	ENSMUSG00000033014.13	novel	5025	19	NA	NA	-106	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	29.2597246721372	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATTATTACACAGAT	NA	False	NA	NA	False	AATAAA	-8	NA	103187088	103262860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103261012
ES.22282.22	chr3	+	9689	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-106	-4558	-106	1345	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCTTTTTCTCAT	NA	False	NA	NA	False	GATAAA	-20	NA	103187088	103267436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.23	chr3	+	3945	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-106	1186	-106	453	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCATTTTCTCTCA	NA	False	NA	NA	False	ACTAAA	-15	NA	103187088	103261692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.24	chr3	+	6651	18	ISM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-87	2	-87	-2	intron_retention	FALSE	canonical	3	95	junction_7	11.8266018834967	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCCTTTGGGTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	103187107	103262876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318
ES.22282.25	chr3	+	5042	21	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3939318098005	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTTGGGTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	103187130	103262878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187217_103187314_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.26	chr3	+	5588	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	580	2707	-6	505	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTGTTTTGTTTCCCT	NA	False	NA	NA	False	CATAAA	-15	NA	103187188	103263384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.27	chr3	+	6045	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	581	2249	-5	963	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGCCTTAATTTACG	NA	False	NA	NA	False	AATAAA	-16	NA	103187189	103263842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.28	chr3	+	5132	22	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-5	25385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	35.3561728261997	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGCTGTACCTAAATT	NA	False	NA	NA	False	AATAAA	-11	NA	103187189	103291476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012_103262868_103273761_103273803_103291455
ES.22282.29	chr3	+	4504	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	667	3704	81	-491	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAAGTGGGACACGTGC	NA	False	NA	NA	False	AATAAA	-28	NA	103187275	103262387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.3	chr3	+	8545	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	398	-68	-188	68	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACAAGCCCTTGCGTT	NA	False	NA	NA	False	ATTAAA	-31	NA	103187006	103266159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.30	chr3	+	1944	1	Intergenic	novelGene_18379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	103201705	103203649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103201700_103203600
ES.22282.31	chr3	+	4239	17	ISM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	32085	3221	-61	-8	3prime_fragment	FALSE	canonical	3	95	junction_4	11.0616171964139	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGATTCCTTTGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	103218693	103262870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.32	chr3	+	3931	14	ISM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	44764	14	-1443	-14	3prime_fragment	FALSE	canonical	3	12	junction_13	29.4509922879614	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTACACAGATTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	103231958	103262864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.33	chr3	+	5640	11	NIC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	2181	-18	intron_retention	FALSE	canonical	3	100	junction_1	10.4828431257937	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATTATTACACAGAT	NA	False	NA	NA	False	AATAAA	-8	NA	103235674	103262860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103236629_103237395_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.34	chr3	+	1473	1	NIC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	2390	881	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTACTATATGAATTAA	NA	False	NA	NA	False	NA	NA	NA	103235883	103237356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103235900_103237400
ES.22282.35	chr3	+	121	1	Intergenic	novelGene_18382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	103250211	103250332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103250200_103250300
ES.22282.36	chr3	+	1280	1	Intergenic	novelGene_18383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAATGTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	103252559	103253839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103252600_103253800
ES.22282.37	chr3	+	2245	5	NNC	ENSMUSG00000033014.13	novel	1788	13	NA	NA	4966	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.1383806678374	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACACAGATTCCTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	103253963	103262867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261022
ES.22282.38	chr3	+	5548	4	ISM	ENSMUSG00000033014.13	ENSMUST00000198706.2	1788	13	22142	-5041	6638	189	3prime_fragment	FALSE	canonical	3	101	junction_2	10.1980390271856	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGATGTTTAGACAA	NA	False	NA	NA	False	NA	NA	NA	103255635	103266280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103255712_103259318_103259472_103260882_103260934_103261012
ES.22282.39	chr3	+	2604	2	ISM	ENSMUSG00000033014.13	ENSMUST00000198706.2	1788	13	26684	-1621	11180	-18	3prime_fragment	FALSE	canonical	3	119	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATTATTACACAGAT	NA	False	NA	NA	False	AATAAA	-8	NA	103260177	103262860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103260934_103261012
ES.22282.5	chr3	+	4996	18	NIC	ENSMUSG00000033014.13	novel	5025	19	NA	NA	-180	-11	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	36.5627866859491	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACACAGATTCCTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	103187014	103262867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.6	chr3	+	8404	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-177	-3202	-177	-11	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAATGAATTTCCTTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	103187017	103266080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ES.22282.7	chr3	+	5325	19	ISM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	410	3219	-176	-6	intron_retention	FALSE	canonical	3	95	junction_7	11.9251782604374	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGATTCCTTTGGGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	103187018	103262872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882
ES.22282.8	chr3	+	5245	20	NNC	ENSMUSG00000033014.13	novel	8875	20	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.1001375180239	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTTGGGTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	103187026	103262878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218838_103228867_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ES.22283.1	chr3	-	1823	1	Intergenic	novelGene_18376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGCTCATCAGAACGCC	NA	False	NA	NA	False	TATAAA	-7	NA	103190645	103188822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103188800_103190600
ES.22284.1	chr3	-	205	2	Antisense	novelGene_ENSMUSG00000033014.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACGGGGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	103193732	103190658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_103190667_103193535
ES.22284.2	chr3	-	178	1	Intergenic	novelGene_18377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACGGGGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	103190836	103190658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103190700_103190800
ES.22284.3	chr3	-	208	1	Intergenic	novelGene_18378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAAAGACTCAG	NA	False	NA	NA	False	NA	NA	NA	103193734	103193526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103193500_103193700
ES.22285.1	chr3	-	251	1	Intergenic	novelGene_18380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCTCAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	103204923	103204672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103204700_103204900
ES.22286.1	chr3	-	5673	1	Intergenic	novelGene_18381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTCACCGGGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	103216593	103210920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103210900_103216600
ES.22287.1	chr3	-	158	1	Antisense	novelGene_ENSMUSG00000104925.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	103240330	103240172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_103240200_103240300
ES.22288.1	chr3	-	144	1	Intergenic	novelGene_18384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	103289865	103289721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103289700_103289900
ES.22289.1	chr3	+	171	1	Intergenic	novelGene_18385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTGTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103306314	103306485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103306300_103306500
ES.2229.1	chr1	-	1363	7	NNC	ENSMUSG00000016194.15	novel	1355	7	NA	NA	-7965	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCCTGCAGTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	192933834	192904143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482_192924773_192933727
ES.2229.2	chr1	-	181	1	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGTATATGGTCCCA	NA	False	NA	NA	False	NA	NA	NA	192912456	192912275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_192912300_192912500
ES.22290.1	chr3	+	174	1	Intergenic	novelGene_18386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAATTTA	NA	False	NA	NA	False	NA	NA	NA	103672593	103672767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103672600_103672800
ES.22291.1	chr3	-	8094	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-61	-3848	-42	3	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTTTCAATTCTGTG	NA	False	NA	1	True	AATAAA	-21	NA	103698633	103647127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.10	chr3	-	7838	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-149	-3504	-130	-341	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGTGTGTGGTTAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	103698721	103647471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.12	chr3	-	7592	16	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	-3	-341	intron_retention	FALSE	canonical	0	0	junction_14	30.149553156814	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGTGTGTGGTTAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	103698575	103647471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667912_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676836_103684533_103685616_103698310
ES.22291.13	chr3	-	8373	15	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	2	-342	intron_retention	FALSE	non_canonical	0	0	junction_5	24.126790934899	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGTGTGTGGTTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103698570	103647472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658090_103658235_103660695_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.14	chr3	-	9197	14	NIC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	0	-342	intron_retention	FALSE	canonical	2	67	junction_7	11.1254279885762	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGTGTGTGGTTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103698572	103647472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.16	chr3	-	7595	15	FSM	ENSMUSG00000008730.18	ENSMUST00000106845.9	3967	15	-224	-3404	-24	-343	multi-exon	FALSE	canonical	0	0	junction_6	25.0106099934587	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCCTGTGTGTGGTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	103698615	103647473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.17	chr3	-	7622	16	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	-47	-343	intron_retention	FALSE	canonical	0	0	junction_5	23.31656540364	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCCTGTGTGTGGTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	103698438	103647473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658022_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.19	chr3	-	2771	7	ISM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	37848	-1059	-2343	961	3prime_fragment	FALSE	canonical	3	63	junction_1	13.076696830622	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGTGAACTAATTGC	NA	False	NA	NA	False	AATGAA	-15	NA	103660724	103649916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695
ES.22291.2	chr3	-	7931	17	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	9	1	intron_retention	FALSE	non_canonical	0	0	junction_1	23.5531314266278	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGGTTTCAATTCTG	NA	False	NA	-1	True	AATAAA	-19	NA	103698563	103647129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103648348_103648438_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.21	chr3	-	4404	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-49	-170	-30	72	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTCCTTGTCTTTTAT	NA	False	NA	NA	False	ACTAAA	-5	NA	103698621	103650805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.22	chr3	-	6940	14	NNC	ENSMUSG00000008730.18	novel	7939	16	NA	NA	-621	12	intron_retention	FALSE	canonical	0	0	junction_13	25.3820511525381	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCTGTAACAGATGAGA	NA	False	NA	NA	False	AGTAAA	-32	NA	103699500	103650865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103699417
ES.22291.23	chr3	-	3582	15	ISM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-57	1483	-38	13	5prime_fragment	FALSE	canonical	2	67	junction_8	11.1302584453922	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGTGTTCTGTGGCTG	NA	False	NA	NA	False	AATAAA	-28	NA	103698629	103652458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.24	chr3	-	6551	13	NNC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	4	-2	intron_retention	FALSE	canonical	2	7	junction_6	24.5508259648338	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAAACCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	103698568	103652473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103661639_103665850_103666077_103667912_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.25	chr3	-	3524	14	ISM	ENSMUSG00000008730.18	ENSMUST00000106845.9	3967	15	-330	1596	-130	-2	5prime_fragment	FALSE	canonical	0	0	junction_5	25.5648612391602	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAAACCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	103698721	103652473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.26	chr3	-	2938	13	ISM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-20	5736	-1	-33	5prime_fragment	FALSE	canonical	2	67	junction_6	11.6010057035299	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGACCAGCATCAGC	NA	False	NA	NA	False	NA	NA	NA	103698592	103656711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.3	chr3	-	8033	15	FSM	ENSMUSG00000008730.18	ENSMUST00000106845.9	3967	15	-322	-3744	-122	-3	multi-exon	FALSE	canonical	0	0	junction_6	25.0106099934587	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCTGGTTTCAAT	NA	False	NA	-5	True	AATAAA	-15	NA	103698713	103647133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22291.9	chr3	-	8865	15	NIC	ENSMUSG00000008730.18	novel	4185	16	NA	NA	2	-5	intron_retention	FALSE	canonical	2	67	junction_8	11.1302584453922	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTGTGGCTGGTTTCA	NA	False	NA	-7	True	AATAAA	-13	NA	103698589	103647135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ES.22292.1	chr3	+	142	1	Intergenic	novelGene_18387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103699532	103699674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103699500_103699700
ES.22293.1	chr3	+	3414	9	NIC	ENSMUSG00000032952.12	novel	2799	10	NA	NA	-611	0	intron_retention	FALSE	canonical	1	1	junction_6	24.1191702800905	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716224	103729341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103727569_103727778_103727993_103728276_103728651
ES.22293.10	chr3	+	3314	9	NNC	ENSMUSG00000032952.12	novel	2692	11	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	23.0867927612304	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGGTGCCTGTCGTCA	NA	False	NA	14	True	ATTAAA	-18	NA	103716933	103729338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103717100_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569
ES.22293.11	chr3	+	2571	9	FSM	ENSMUSG00000032952.12	ENSMUST00000106824.8	2412	9	37	-196	2	1	multi-exon	FALSE	canonical	1	1	junction_1	23.7999474789336	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGCCTGTCGTCACT	NA	False	NA	16	True	ATTAAA	-20	NA	103716945	103729340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103717374_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.12	chr3	+	1286	4	ISM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	9171	3	3741	-1	3prime_fragment	FALSE	canonical	3	54	junction_1	13.1402688962847	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGGTGCCTGTCGTCA	NA	False	NA	14	True	ATTAAA	-18	NA	103726114	103729338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.2	chr3	+	3039	11	NNC	ENSMUSG00000032952.12	novel	2799	10	NA	NA	-566	0	intron_retention	FALSE	canonical	0	0	junction_1	22.1099525101254	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	False	NA	15	True	ATTAAA	-19	NA	103716269	103729339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103716752_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.3	chr3	+	3427	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	-628	0	-520	0	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716315	103729341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.4	chr3	+	3568	16	NNC	ENSMUSG00000105053.2	novel	3144	14	NA	NA	-122	-3	intron_retention	FALSE	canonical	0	0	junction_10	34.1525987298185	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGTTTAGTTTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	103716766	103745961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651_103729109_103736576_103736667_103737801_103737981_103740190_103740284_103740671_103740794_103743358_103743587_103745848
ES.22293.5	chr3	+	2586	11	NNC	ENSMUSG00000032952.12	novel	2799	10	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1099525101254	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	False	NA	15	True	ATTAAA	-19	NA	103716777	103729339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103716807_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.6	chr3	+	5990	8	NNC	ENSMUSG00000032952.12	novel	2692	11	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_1	26.180690812669	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	False	NA	15	True	ATTAAA	-19	NA	103716841	103729339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103718026_103718730_103719626_103720092_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.7	chr3	+	2773	11	NNC	ENSMUSG00000032952.12	novel	2799	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.1099525101254	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716885	103729341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103717100_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22293.9	chr3	+	2513	10	NNC	ENSMUSG00000032952.12	novel	2692	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2591654944583	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	False	NA	15	True	ATTAAA	-19	NA	103716918	103729339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103717100_103717183_103717374_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ES.22294.1	chr3	-	4490	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	-138	-7	-138	7	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTTTCCTTATTTTTA	NA	False	NA	6	True	AATAAA	-22	NA	103716898	103707913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ES.22294.2	chr3	-	2479	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	-123	1989	-123	291	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGTCCCAGATAAAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	103716883	103709909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ES.22294.3	chr3	-	5591	3	FSM	ENSMUSG00000027845.16	ENSMUST00000106832.2	2299	3	9	-3301	-2	252	multi-exon	FALSE	canonical	3	65	junction_2	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGTATATTGTTATTA	NA	False	NA	NA	False	AATAGA	-15	NA	103716696	103709948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103714893_103715387_103715554_103716215
ES.22294.4	chr3	-	2069	3	FSM	ENSMUSG00000027845.16	ENSMUST00000063502.13	4113	3	11	2033	11	247	multi-exon	FALSE	canonical	3	26	junction_2	24.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAACCAGTATATTGT	NA	False	NA	NA	False	AATAGA	-10	NA	103716683	103709953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103711372_103714709_103714893_103716215
ES.22294.5	chr3	-	2140	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	64	2141	-2	139	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTCCACTTGGTTTA	NA	False	NA	NA	False	NA	NA	NA	103716696	103710061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ES.22294.6	chr3	-	3253	4	NNC	ENSMUSG00000027845.16	novel	4345	4	NA	NA	-2	126	intron_retention	FALSE	canonical	0	0	junction_1	33.2498955721	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATAGCAATTTAATTTGT	NA	False	NA	NA	False	TATAAA	-41	NA	103716696	103710074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103712498_103714709_103714893_103715387_103715554_103716215
ES.22294.7	chr3	-	1074	4	NNC	ENSMUSG00000027845.16	novel	2299	3	NA	NA	15	-129	intron_retention	FALSE	canonical	0	0	junction_1	33.2498955721	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTATGTATTTTTGCT	NA	False	NA	NA	False	GATAAA	-19	NA	103716679	103711471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103711733_103714709_103714893_103715387_103715554_103716215
ES.22295.1	chr3	-	229	1	Intergenic	novelGene_18388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACCACTTAGTAATC	NA	False	NA	NA	False	NA	NA	NA	103723265	103723036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103723000_103723300
ES.22296.1	chr3	+	4513	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	256	-7	-191	7	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	25	True	AATAAA	-22	NA	103821691	103873936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ES.22296.10	chr3	+	5003	25	Fusion	ENSMUSG00000044098.15_ENSMUSG00000058388.15	novel	1485	11	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_7	21.2855911096894	288	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103821882	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869863_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.11	chr3	+	6140	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	425	147	9	-124	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTAGCTGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	103821891	103873805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.12	chr3	+	4029	6	NIC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	9	1181	intron_retention	FALSE	canonical	3	10	junction_1	24.576411454889	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCATGGTCTGGTATCC	NA	False	NA	NA	False	ATTAAA	-18	NA	103821891	103872368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103822470_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.13	chr3	+	6264	7	NNC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	9	6	intron_retention	FALSE	canonical	1	1	junction_1	25.6753232155356	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103821891	103873935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103835672_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.14	chr3	+	2391	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	426	3895	10	-1130	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAATGTCAAGCATATCT	NA	False	NA	NA	False	TATAAA	-15	NA	103821892	103870057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.15	chr3	+	2496	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	457	1809	10	933	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCATGTACTAATGAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	103821892	103872120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ES.22296.16	chr3	+	4236	8	NNC	ENSMUSG00000044098.15	novel	4762	8	NA	NA	15	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.1365164962019	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGATGTTTCAAAATGAA	NA	False	NA	23	True	AATAAA	-20	NA	103821897	103873934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869863_103871889
ES.22296.17	chr3	+	4694	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	433	1585	17	1180	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCATGGTCTGGTATC	NA	False	NA	NA	False	ATTAAA	-17	NA	103821899	103872367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.18	chr3	+	4508	10	NNC	ENSMUSG00000044098.15	novel	4762	8	NA	NA	18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.8321213653329	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGATGTTTCAAAATGAA	NA	False	NA	23	True	AATAAA	-20	NA	103821900	103873934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103835666_103836341_103836726_103836815_103837352_103837471_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ES.22296.2	chr3	+	5729	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	234	749	-182	-726	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGTTTTTCTAATAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	103821700	103873203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.20	chr3	+	4522	9	NNC	ENSMUSG00000044098.15	novel	4762	8	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8501924629329	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103821902	103873935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103827930_103828152_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ES.22296.21	chr3	+	6846	5	NNC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	32	6	intron_retention	FALSE	canonical	0	0	junction_2	32.6879182573623	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103821914	103873935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103860952_103861091_103861449_103861564_103867318_103868898_103869475
ES.22296.22	chr3	+	6366	8	FSM	ENSMUSG00000044098.15	ENSMUST00000151927.4	3649	8	32	-2749	32	7	multi-exon	FALSE	canonical	0	0	junction_2	30.3570588234131	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	NA	False	NA	25	True	AATAAA	-22	NA	103821914	103873936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103837352_103837471_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.23	chr3	+	5884	5	ISM	ENSMUSG00000044098.15	ENSMUST00000151927.4	3649	8	32	5368	32	-1633	5prime_fragment	FALSE	canonical	0	0	junction_2	31.4434015335491	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAATTTTGACT	NA	False	NA	NA	False	NA	NA	NA	103821914	103865819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103822470_103835666_103836341_103837352_103837471_103860952_103861091_103861420
ES.22296.24	chr3	+	5766	4	ISM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	448	8133	32	-1633	5prime_fragment	FALSE	canonical	3	59	junction_2	4.49691252107735	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAATTTTGACT	NA	False	NA	NA	False	NA	NA	NA	103821914	103865819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420
ES.22296.25	chr3	+	3114	6	NIC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	50	307	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	24.576411454889	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCATTTATGAATTGG	NA	False	NA	NA	False	AATAAA	-18	NA	103821932	103871494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103822470_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.26	chr3	+	5464	6	NIC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	141	6	intron_retention	FALSE	canonical	3	10	junction_1	24.576411454889	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATGTTTCAAAATGAAT	NA	False	NA	24	True	AATAAA	-21	NA	103822023	103873935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103822470_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.27	chr3	+	1456	3	ISM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	14600	11488	133	-4988	internal_fragment	FALSE	canonical	3	59	junction_1	5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTGTTCAATGAGAC	2760	False	NA	NA	False	AATAAA	-14	NA	103836066	103862464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103836341_103860952_103861091_103861420
ES.22296.28	chr3	+	9161	3	ISM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	41429	16	26962	7	3prime_fragment	FALSE	canonical	3	73	junction_1	2	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	2512	False	NA	25	True	AATAAA	-22	NA	103862895	103873936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103867487_103868788_103868898_103869475
ES.22296.29	chr3	+	2751	2	Intergenic	novelGene_18390	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2555	False	NA	NA	False	NA	NA	NA	103862938	103865787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103863085_103863182
ES.22296.3	chr3	+	6439	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	271	2	-145	-2	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAGCACATGGGAGTTG	NA	False	NA	39	True	AATAAA	-36	NA	103821737	103873950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.30	chr3	+	5390	1	NIC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	32613	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGTTTCAAAATGAATA	4472	False	NA	25	True	AATAAA	-22	NA	103868546	103873936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103868500_103873900
ES.22296.31	chr3	+	3023	17	NIC	ENSMUSG00000058388.15	novel	3060	18	NA	NA	-34	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	24.4719226870305	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875647	103914803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.32	chr3	+	3191	18	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875654	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.33	chr3	+	7253	15	NNC	ENSMUSG00000058388.15	novel	4179	18	NA	NA	-27	-2	intron_retention	FALSE	canonical	0	0	junction_3	36.6575437011822	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875654	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103888015_103888181_103889201_103889272_103893068_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.34	chr3	+	3248	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	81	-2	-27	0	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875654	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.35	chr3	+	3115	18	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.480242743804	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875655	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893231_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.37	chr3	+	3128	19	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.0873275057557	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875661	103914803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103904977_103906052_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.38	chr3	+	2942	17	NIC	ENSMUSG00000058388.15	novel	3060	18	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	28.135553575503	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875662	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.4	chr3	+	5685	5	NNC	ENSMUSG00000044098.15	novel	6712	7	NA	NA	-37	-1633	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	27.4135003237456	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAATTTTGACT	NA	False	NA	NA	False	NA	NA	NA	103821845	103865819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103863009_103863158
ES.22296.40	chr3	+	5169	16	NIC	ENSMUSG00000058388.15	novel	4179	18	NA	NA	-16	0	intron_retention	FALSE	canonical	1	4	junction_8	24.3936239392364	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875665	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103896091_103898353_103898528_103900996_103901219_103903917_103904047_103904748_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.43	chr3	+	3140	18	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	23.3718252289562	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875673	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.44	chr3	+	2626	15	NNC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.2884947160631	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAATTTCAGTTTCTAG	NA	False	NA	1	True	AATAAA	-11	NA	103875674	103914799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876368_103876447_103877069_103877127_103889201_103889272_103890259_103890421_103893068_103893231_103898353_103898528_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.45	chr3	+	4186	18	FSM	ENSMUSG00000058388.15	ENSMUST00000150090.8	4179	18	-5	-2	1	0	multi-exon	FALSE	canonical	3	55	junction_6	13.0453030166358	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875682	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.46	chr3	+	3077	18	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	26.4586901364566	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTTCAGTTTCTAGG	NA	False	NA	2	True	AATAAA	-12	NA	103875683	103914800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103896009_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.47	chr3	+	3053	18	FSM	ENSMUSG00000058388.15	ENSMUST00000055425.15	3060	18	0	7	0	-5	multi-exon	FALSE	canonical	2	7	junction_4	22.8624592186075	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAATTTCAGTTTCTAG	NA	False	NA	1	True	AATAAA	-11	NA	103875683	103914799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.48	chr3	+	4200	20	NNC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	0	1465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	22.8918933503421	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGAATGCTGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	103875683	103916271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303_103914657_103915140
ES.22296.49	chr3	+	8047	16	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	1	-2	intron_retention	FALSE	canonical	3	60	junction_10	13.1324872823933	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875684	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.5	chr3	+	3656	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	416	690	-31	-690	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGCACATGCCAGAGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	103821851	103873239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ES.22296.51	chr3	+	7055	14	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_6	25.4967221469091	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875684	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103898353_103898528_103898635_103898723_103900996_103904047_103904748_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.52	chr3	+	4155	19	NNC	ENSMUSG00000058388.15	novel	4179	18	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_9	39.8043440150587	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875684	103914803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103878024_103878075_103889201_103889272_103890261_103890421_103893068_103893231_103894742_103894878_103896132_103896212_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.53	chr3	+	2861	16	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	27.9408899882114	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875685	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.54	chr3	+	3103	19	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	32.8366702572025	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875685	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103878024_103878075_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.56	chr3	+	2998	17	NIC	ENSMUSG00000058388.15	novel	3060	18	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	26.5891777796907	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCAGTTTCTAGGCTT	NA	False	NA	5	True	AATAAA	-15	NA	103875685	103914803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.57	chr3	+	3132	19	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	22.9640755405503	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAGTTTCTAGGCT	NA	False	NA	4	True	AATAAA	-14	NA	103875687	103914802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103896009_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.58	chr3	+	2756	16	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	30.7212557613708	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875690	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.59	chr3	+	2763	15	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	34.3440723578677	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875698	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103898353_103898528_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.6	chr3	+	3867	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	394	2451	-22	314	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGAATTGGAAGTGAT	NA	False	NA	NA	False	AATAAA	-25	NA	103821860	103871501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22296.60	chr3	+	4940	16	NIC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	21	0	intron_retention	FALSE	canonical	1	4	junction_8	24.3173463464526	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875710	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103896091_103898353_103898528_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103911799_103912814_103912941_103914303
ES.22296.61	chr3	+	5556	17	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	13	0	intron_retention	FALSE	canonical	3	60	junction_11	12.753522797643	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875916	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.62	chr3	+	2678	18	NNC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	33.683752102599	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875984	103914806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103878024_103878075_103889201_103889272_103890261_103890421_103893068_103893231_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.63	chr3	+	2919	19	NNC	ENSMUSG00000058388.15	novel	3327	19	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.852935960231	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875992	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103876104_103876370_103876447_103877069_103877127_103888015_103888181_103889201_103889272_103893068_103893231_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.64	chr3	+	3084	10	ISM	ENSMUSG00000058388.15	ENSMUST00000150090.8	4179	18	22531	0	-5517	0	3prime_fragment	FALSE	canonical	3	74	junction_3	11.1432867461164	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103898218	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.65	chr3	+	4328	8	NIC	ENSMUSG00000058388.15	novel	3060	18	NA	NA	-2649	-3	intron_retention	FALSE	canonical	3	60	junction_2	14.8585164200226	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTCAGTTTCTAGGC	NA	False	NA	3	True	AATAAA	-13	NA	103901086	103914801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.66	chr3	+	5480	9	NNC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	50	-6665	intron_retention	FALSE	canonical	0	0	junction_8	33.8376177500722	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAATAAAA	1970	False	NA	NA	False	NA	NA	NA	103903785	103925249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303_103915196_103921792
ES.22296.67	chr3	+	3840	4	ISM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	32040	2	4066	0	3prime_fragment	FALSE	canonical	3	98	junction_1	4.10960933531265	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	5986	False	NA	6	True	AATAAA	-16	NA	103907801	103914804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_103910919_103911702_103911799_103912814_103912941_103914303
ES.22296.68	chr3	+	4110	1	NIC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	8396	1435	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4072	False	NA	NA	False	NA	NA	NA	103912131	103916241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_103912100_103916200
ES.22296.8	chr3	+	5735	7	NNC	ENSMUSG00000044098.15	novel	3649	8	NA	NA	-1	-1665	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	30.0799859633537	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103821881	103865787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_103822470_103835666_103836341_103837352_103837471_103860952_103861091_103861420_103863059_103863158_103863259_103863308
ES.22296.9	chr3	+	4469	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	415	1828	-1	937	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTACTAATGAAGTCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	103821881	103872124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ES.22297.1	chr3	+	1702	1	Intergenic	novelGene_18392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACCAAACCAAACCA	7693	False	NA	NA	False	NA	NA	NA	103976338	103978040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_103976300_103978000
ES.22298.1	chr3	+	4897	1	FSM	ENSMUSG00002076048.1	ENSMUST00020182613.1	102	1	-3780	-1015	-3780	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCCTGCAAT	7555	False	NA	NA	False	NA	NA	NA	103995916	104000813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_103995900_104000800
ES.22299.1	chr3	-	2981	2	Intergenic	novelGene_18389	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACACACACACGCTAA	431	False	NA	NA	False	NA	NA	NA	103867725	103798718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103798746_103864771
ES.22299.2	chr3	-	1806	1	Intergenic	novelGene_18391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAGAGAAAAGAA	1610	False	NA	NA	False	NA	NA	NA	103866546	103864740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_103864700_103866500
ES.223.1	chr1	-	2037	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	20	-82	20	82	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGGGGCAGAGGGAGC	NA	False	NA	80	True	AATAAA	-19	NA	33708856	33492808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ES.223.2	chr1	-	1953	14	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	102.948944662394	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTGCAAGTGGGAGT	NA	False	NA	-3	True	AATAAA	-17	NA	33708872	33492891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708721
ES.223.3	chr1	-	1966	14	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	105.020031901498	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTGCAAGTGGGAGT	NA	False	NA	-3	True	AATAAA	-17	NA	33708898	33492891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708734
ES.223.4	chr1	-	2053	15	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	115.004103742219	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCAAGTGGGAG	NA	False	NA	-4	True	AATAAA	-16	NA	33708854	33492892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33493386_33493509_33493612_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ES.223.5	chr1	-	1813	13	NIC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	111.990947054761	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTGCAAGTGGGAG	NA	False	NA	-4	True	AATAAA	-16	NA	33708854	33492892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ES.223.6	chr1	-	1839	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	10	126	10	-126	multi-exon	FALSE	canonical	3	132	junction_10	82.0868352460372	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTATTGAAACTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	33708866	33493016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ES.223.7	chr1	-	1470	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCCAAAAAAAAAAAAGAA	7806	False	NA	NA	False	NA	NA	NA	33613613	33612143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33612100_33613600
ES.223.8	chr1	-	1109	8	NNC	ENSMUSG00000026134.12	novel	1975	14	NA	NA	20	15709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0124395327989	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGTGTAGTATTCACC	NA	False	NA	NA	False	NA	NA	NA	33708856	33644249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33644505_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ES.2230.1	chr1	+	245	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAACCCCGAATTCC	NA	False	NA	NA	False	NA	NA	NA	192936428	192936673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_192936400_192936700
ES.22300.1	chr3	-	3759	1	FSM	ENSMUSG00000089998.3	ENSMUST00000160110.2	4046	1	291	-4	291	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTCTCTTCATGATT	NA	False	NA	NA	False	AATAAA	-16	NA	103875606	103871847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103871800_103875600
ES.22301.1	chr3	-	6618	21	FSM	ENSMUSG00000052539.16	ENSMUST00000121198.8	5912	21	-322	-384	-51	18	multi-exon	FALSE	canonical	3	26	junction_1	8.46404158779953	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGTTAGCATCATTT	NA	False	NA	NA	False	ATTAAA	-31	NA	104127741	103920556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.11	chr3	-	6640	21	NNC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.1672156756365	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127729	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954322_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.13	chr3	-	6276	20	NIC	ENSMUSG00000052539.16	novel	5912	21	NA	NA	64	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	12.6241206051206	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	104127490	103920589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.14	chr3	-	5926	23	NNC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	-33	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.6901967700726	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	104127723	103920589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103922008_103922739_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.15	chr3	-	7204	20	NIC	ENSMUSG00000052539.16	novel	5912	21	NA	NA	-24	-80	intron_retention	FALSE	canonical	3	26	junction_1	8.44470362952909	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACTTGAGGTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	104127714	103920654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.16	chr3	-	1522	1	ISM	ENSMUSG00000052539.16	ENSMUST00000064371.14	6640	22	204982	612	46871	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGGAGACAATTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	103922708	103921186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_103921200_103922700
ES.22301.17	chr3	-	5187	21	FSM	ENSMUSG00000052539.16	ENSMUST00000121198.8	5912	21	-269	994	2	-994	multi-exon	FALSE	canonical	3	26	junction_1	8.46404158779953	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTTCCGTTTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	104127688	103921934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.18	chr3	-	4007	21	FSM	ENSMUSG00000052539.16	ENSMUST00000122303.2	3827	21	-182	2	-46	-2	multi-exon	FALSE	canonical	3	21	junction_1	9.00152764812729	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTTGGTTACCACAG	NA	False	NA	NA	False	ATTAAA	-17	NA	104127736	103923786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.19	chr3	-	3520	1	FSM	ENSMUSG00000104721.2	ENSMUST00000199859.2	1142	1	-2349	-29	-2349	29	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATAGAAAGAAAGAAAGAA	493	False	NA	NA	False	NA	NA	NA	103967806	103964286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103964300_103967800
ES.22301.2	chr3	-	7227	21	FSM	ENSMUSG00000052539.16	ENSMUST00000122303.2	3827	21	-190	-3210	-54	0	multi-exon	FALSE	canonical	3	21	junction_1	9.00152764812729	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127744	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.20	chr3	-	4700	1	Intergenic	novelGene_18393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104106265	104101565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104101600_104106300
ES.22301.3	chr3	-	7979	20	NIC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_15	7.77879780498624	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127688	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.5	chr3	-	6830	21	NNC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.3015242957936	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127736	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103928855_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.6	chr3	-	4723	1	NIC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	44282	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	103925297	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_103920600_103925300
ES.22301.7	chr3	-	7277	23	NNC	ENSMUSG00000052539.16	novel	6640	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.564384278407	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127687	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929196_103935113_103935300_103939118_103939755_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969008_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22301.8	chr3	-	6685	22	FSM	ENSMUSG00000052539.16	ENSMUST00000064371.14	6640	22	-45	0	-45	0	multi-exon	FALSE	canonical	3	11	junction_1	11.0079336469023	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127735	103920574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ES.22302.1	chr3	+	1223	1	Intergenic	novelGene_18394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGCCTTCACATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	104128173	104129396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104128200_104129400
ES.22303.1	chr3	-	202	1	Intergenic	novelGene_18395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCATGGTTTGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	104181967	104181765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104181800_104182000
ES.22304.1	chr3	-	1926	1	Intergenic	novelGene_18396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTCGTGA	NA	False	NA	NA	False	NA	NA	NA	104322486	104320560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104320600_104322500
ES.22305.1	chr3	+	167	1	Intergenic	novelGene_18397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGGAGACAGGATC	NA	False	NA	NA	False	NA	NA	NA	104385044	104385211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104385000_104385200
ES.22306.1	chr3	+	2608	1	Antisense	novelGene_ENSMUSG00000105659.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCAGCCCAAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	104415918	104418526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_104415900_104418500
ES.22307.11	chr3	-	6878	18	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	69	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.754573547388	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTCTCTGGTCTTCTCT	NA	False	NA	-24	True	AATAAA	-12	NA	104418908	104361299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.12	chr3	-	7123	19	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.596306492951	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATTCTCTGGTCTTCTC	NA	False	NA	-25	True	AATAAA	-11	NA	104419004	104361300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.13	chr3	-	5761	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-57	1395	21	1195	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAATTATGGCATCATT	NA	False	NA	NA	False	ACTAAA	-3	NA	104419213	104362690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.14	chr3	-	5301	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-51	1849	27	741	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTTTGTCTGGAAGC	NA	False	NA	NA	False	AGTAAA	-28	NA	104419207	104363144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.15	chr3	-	5291	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-57	-1288	5	730	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAAAAGTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	104419229	104363155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.16	chr3	-	5160	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	4	727	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAATTGGAAAAGTTGTC	NA	False	NA	NA	False	AGTAAA	-14	NA	104419230	104363158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.17	chr3	-	4677	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-42	-689	20	131	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCTATTTATAAGTAAC	NA	False	NA	NA	False	TTTAAA	-1	NA	104419214	104363754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.18	chr3	-	4709	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-72	2462	6	128	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGTCTATTTATAAGT	NA	False	NA	NA	False	NA	NA	NA	104419228	104363757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.19	chr3	-	5683	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	15	61	intron_retention	FALSE	canonical	3	67	junction_9	12.5248191104702	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAATGTCATGTGCTT	NA	False	NA	NA	False	AAAAAG	-28	NA	104419219	104363824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104369974_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.2	chr3	-	7023	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419230	104361295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.20	chr3	-	4341	15	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	4	61	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	28.6666271159354	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAATGTCATGTGCTT	NA	False	NA	NA	False	AAAAAG	-28	NA	104419230	104363824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.21	chr3	-	4070	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-73	-51	-11	51	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAATGTCTGTCTGGT	NA	False	NA	45	True	NA	NA	NA	104419245	104364392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.22	chr3	-	3930	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	12	48	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	25.4211403166734	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATATAATGTCTGTCT	NA	False	NA	42	True	NA	NA	NA	104419222	104364395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401946_104402022_104404804_104404871_104418771
ES.22307.23	chr3	-	4204	19	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.596306492951	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTGTTGGATACAGT	NA	False	NA	-1	True	CATAAA	-20	NA	104419223	104364438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.24	chr3	-	3878	17	NIC	ENSMUSG00000032913.14	novel	3946	18	NA	NA	6	5	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTGTTGGATACAGT	NA	False	NA	-1	True	CATAAA	-20	NA	104419228	104364438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.25	chr3	-	5390	18	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	24.0502645497611	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGTGTTGGATACAG	NA	False	NA	-2	True	CATAAA	-19	NA	104419214	104364439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104396468_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.26	chr3	-	4031	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-77	3145	1	3	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGTGTGTTGGATACA	NA	False	NA	-3	True	CATAAA	-18	NA	104419233	104364440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.27	chr3	-	4060	18	NIC	ENSMUSG00000032913.14	novel	3946	18	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	23.8937961573645	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACCTTGTGTGTTGGAT	NA	False	NA	-6	True	CATAAA	-15	NA	104419228	104364443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104369974_104370162_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.28	chr3	-	4161	19	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.2278133960752	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACCTTGTGTGTTGGAT	NA	False	NA	-6	True	CATAAA	-15	NA	104419169	104364443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104398988_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.29	chr3	-	3835	8	ISM	ENSMUSG00000032913.14	ENSMUST00000198089.5	1719	9	-264	6742	-7	2377	5prime_fragment	FALSE	canonical	3	75	junction_1	8.83869045614744	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	104419241	104395332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.30	chr3	-	3825	8	NNC	ENSMUSG00000032913.14	novel	1719	9	NA	NA	19	2377	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	31.372677570765	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	104419215	104395332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104397990_104398183_104398328_104398726_104398871_104398988_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.31	chr3	-	3951	7	NIC	ENSMUSG00000032913.14	novel	1719	9	NA	NA	11	2377	intron_retention	FALSE	canonical	3	75	junction_1	8.43438728592	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	104419223	104395332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104397990_104398183_104398328_104398726_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.32	chr3	-	6816	7	ISM	ENSMUSG00000032913.14	ENSMUST00000198089.5	1719	9	10656	6742	-9574	2377	internal_fragment	FALSE	canonical	3	75	junction_1	8.89600409672168	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	104408321	104395332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804
ES.22307.33	chr3	-	4145	7	NIC	ENSMUSG00000032913.14	novel	1719	9	NA	NA	4	2377	intron_retention	FALSE	canonical	3	75	junction_1	7.98783797754784	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	104419152	104395332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104397990_104398183_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.34	chr3	-	4317	6	NIC	ENSMUSG00000032913.14	novel	1719	9	NA	NA	11	2344	intron_retention	FALSE	canonical	3	75	junction_1	7.78203058333749	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104419223	104395365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104397990_104398183_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.4	chr3	-	7176	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	-77	0	1	0	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419233	104361295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.5	chr3	-	7135	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	-41	-3148	21	0	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419213	104361295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.6	chr3	-	6860	18	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	5141	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.4647900370531	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTCTGGTCTTCTCTT	NA	False	NA	-23	True	AATAAA	-13	NA	104413836	104361298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104413687
ES.22307.7	chr3	-	8202	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	21	-3	intron_retention	FALSE	canonical	3	67	junction_9	12.5248191104702	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTCTCTGGTCTTCTCT	NA	False	NA	-24	True	AATAAA	-12	NA	104419213	104361299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104365281_104368716_104369005_104369974_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.8	chr3	-	9544	19	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.3349514181816	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTCTCTGGTCTTCTCT	NA	False	NA	-24	True	AATAAA	-12	NA	104419230	104361299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104383345_104383527_104387097_104387167_104387424_104387497_104389170_104389252_104395651_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ES.22307.9	chr3	-	7011	17	NNC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	27.7713178252311	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTCTCTGGTCTTCTCT	NA	False	NA	-24	True	AATAAA	-12	NA	104419230	104361299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401954_104402022_104404804_104404871_104418771
ES.22308.1	chr3	+	177	1	Intergenic	novelGene_18398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATTCAGTAAGAT	NA	False	NA	NA	False	NA	NA	NA	104434599	104434776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104434600_104434800
ES.22309.1	chr3	+	177	1	Intergenic	novelGene_18399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAATGAGCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	104445456	104445633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104445500_104445600
ES.2231.1	chr1	-	851	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	20	0	20	0	multi-exon	FALSE	canonical	3	79	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCATTATTTAATTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	192955505	192954468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_192955111_192955296
ES.22310.1	chr3	+	165	1	Intergenic	novelGene_18400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	104489066	104489231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104489100_104489200
ES.22311.1	chr3	+	5476	1	Antisense	novelGene_ENSMUSG00000106565.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAATCAAAAACAACCA	NA	False	NA	NA	False	NA	NA	NA	104539430	104544906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_104539400_104544900
ES.22312.1	chr3	-	159	1	Intergenic	novelGene_18401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAATAAACC	NA	False	NA	NA	False	NA	NA	NA	104543556	104543397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104543400_104543600
ES.22313.1	chr3	+	3404	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	-177	1199	-177	-1199	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGCATGTTTATTTGTG	NA	False	NA	28	True	AATAAA	-29	NA	104545806	104564579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ES.22313.10	chr3	+	2896	3	ISM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	12119	1208	12119	-1208	3prime_fragment	FALSE	canonical	3	488	junction_1	18	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCTTCCGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	104558102	104564570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104558346_104560057_104560904_104562763
ES.22313.11	chr3	+	2652	2	ISM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	14072	1211	14072	-1211	3prime_fragment	FALSE	canonical	3	524	junction_1	0	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAACAGTTCTTCCGCA	NA	False	NA	16	True	AATAAA	-17	NA	104560055	104564567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104560904_104562763
ES.22313.12	chr3	+	2314	3	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	14258	-1208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	262	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCTTCCGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	104560241	104564570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104560511_104560665_104560904_104562763
ES.22313.13	chr3	+	9559	1	Genic_Genomic	ENSMUSG00000032902.2	novel	NA	NA	NA	NA	14410	4174	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCAAATACTATTTTG	NA	False	NA	NA	False	NA	NA	NA	104560393	104569952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_104560400_104570000
ES.22313.14	chr3	+	3671	1	NIC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	14920	-1204	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	104560903	104564574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104560900_104564600
ES.22313.2	chr3	+	3406	5	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	-164	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	230.556256692374	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	104545819	104564574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562743
ES.22313.3	chr3	+	2419	5	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	-2	-1208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	230.556256692374	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCTTCCGCATGT	NA	False	NA	19	True	AATAAA	-20	NA	104545981	104564570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560103_104562763
ES.22313.4	chr3	+	3160	6	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	-2	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	213.093031326695	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	104545981	104564574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763_104564167_104564230
ES.22313.5	chr3	+	3155	6	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	0	-1210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	213.093031326695	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACAGTTCTTCCGCAT	NA	False	NA	17	True	AATAAA	-18	NA	104545983	104564568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763_104563532_104563592
ES.22313.6	chr3	+	3626	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	0	800	0	-800	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGAGCTCTGTGTGT	NA	False	NA	NA	False	TATAAA	-24	NA	104545983	104564978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ES.22313.7	chr3	+	4428	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	4	-6	4	6	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGTATATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	104545987	104565784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ES.22313.8	chr3	+	3529	5	NNC	ENSMUSG00000032902.2	novel	4426	5	NA	NA	166	-1203	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	214.358782185382	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTCCGCATGTTTATT	NA	False	NA	24	True	AATAAA	-25	NA	104546149	104564575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104546617_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ES.22313.9	chr3	+	3631	4	ISM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	10597	627	10597	-627	3prime_fragment	FALSE	canonical	3	470	junction_1	22.4499443206436	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTGTTAGCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	104556580	104565151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104556834_104558201_104558346_104560057_104560904_104562763
ES.22314.1	chr3	-	569	3	Intergenic	novelGene_18402	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACAGCCTCTTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	104587985	104586148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104586462_104587263_104587447_104587912
ES.22315.1	chr3	+	187	2	Intergenic	novelGene_18403	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATGCACATTGGTGTT	NA	False	NA	NA	False	TTTAAA	-9	NA	104626603	104644974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104626775_104644958
ES.22316.1	chr3	-	188	1	Intergenic	novelGene_18404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	104673086	104672898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104672900_104673100
ES.22317.1	chr3	+	1742	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	-24	3	-24	-3	multi-exon	TRUE	canonical	3	56	junction_1	13.4200881305638	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688347	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ES.22317.10	chr3	+	3035	8	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	26	-3	intron_retention	FALSE	canonical	3	74	junction_7	10.7551601284107	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688397	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
ES.22317.11	chr3	+	3235	7	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	31	-1	intron_retention	FALSE	canonical	3	74	junction_6	11.0063113207327	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTGTGTCATTATTTG	NA	False	NA	NA	False	AATAAA	-13	NA	104688402	104693333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692336_104692501_104692610_104692713
ES.22317.12	chr3	+	3243	7	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	33	-5	intron_retention	FALSE	canonical	3	74	junction_5	12.0196598214019	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACGTTGTGTGTCATTA	NA	False	NA	NA	False	AATAAA	-9	NA	104688404	104693329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692610_104692713_104692866_104693017
ES.22317.13	chr3	+	4275	3	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	41	-3	intron_retention	FALSE	canonical	3	95	junction_2	6	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688412	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969
ES.22317.14	chr3	+	1976	8	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	46	-3	intron_retention	FALSE	canonical	3	23	junction_7	25.7206341369758	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688417	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692336_104692501_104692559_104692713
ES.22317.15	chr3	+	4910	1	FSM	ENSMUSG00000002228.8	ENSMUST00000197264.2	410	1	-4500	0	53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688424	104693334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104688400_104693300
ES.22317.16	chr3	+	4382	2	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	70	-5	intron_retention	FALSE	canonical	3	81	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACGTTGTGTGTCATTA	NA	False	NA	NA	False	AATAAA	-9	NA	104688441	104693329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104691444_104691949
ES.22317.17	chr3	+	2037	8	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1111	-3	intron_retention	FALSE	canonical	3	74	junction_6	10.5945692672795	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104689482	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ES.22317.18	chr3	+	1535	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1289	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	26.524621685437	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACGTTGTGTGTCATTA	NA	False	NA	NA	False	AATAAA	-9	NA	104689660	104693329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104689834_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ES.22317.19	chr3	+	1494	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1289	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	30.1211545365924	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104689660	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104689842_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
ES.22317.2	chr3	+	3013	8	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_7	24.5090570514457	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688371	104693334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713
ES.22317.20	chr3	+	1694	9	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	1291	-4	intron_retention	FALSE	canonical	3	11	junction_1	26.5915282561947	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTTGTGTGTCATTAT	NA	False	NA	NA	False	AATAAA	-10	NA	104689662	104693330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104689842_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
ES.22317.21	chr3	+	3267	2	ISM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	1291	0	1291	0	intron_retention	FALSE	canonical	3	107	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104689662	104693334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104690038_104690442
ES.22317.3	chr3	+	1667	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	22.6949714341098	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTGTGTCATTATTTG	NA	False	NA	NA	False	AATAAA	-13	NA	104688373	104693333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
ES.22317.4	chr3	+	1659	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	24.7835070605881	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688374	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692810_104693017
ES.22317.5	chr3	+	2858	9	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	23	junction_7	22.9670279966738	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688374	104693334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
ES.22317.6	chr3	+	3160	7	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	5	-3	intron_retention	FALSE	canonical	3	77	junction_5	10.4668789787384	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688376	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501
ES.22317.7	chr3	+	1859	9	ISM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	11	3	11	-3	intron_retention	FALSE	canonical	3	56	junction_1	13.9977676791694	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTGTGTGTCATTATT	NA	False	NA	NA	False	AATAAA	-11	NA	104688382	104693331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713
ES.22317.8	chr3	+	3323	7	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	13	-4	intron_retention	FALSE	canonical	3	23	junction_5	26.4994758858024	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTTGTGTGTCATTAT	NA	False	NA	NA	False	AATAAA	-10	NA	104688384	104693330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104690038_104690442_104690731_104690969_104691444_104691949_104692336_104692501_104692559_104692713_104692866_104693017
ES.22317.9	chr3	+	2887	9	NIC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	23	-2	intron_retention	FALSE	canonical	3	74	junction_7	10.7470926301023	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGTGTGTCATTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	104688394	104693332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ES.22318.1	chr3	+	1115	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	87	0	-59	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696290	104701775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ES.22318.2	chr3	+	1068	5	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	-30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97.1300674353725	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTCCTGT	NA	False	NA	9	True	AATAAA	-16	NA	104696319	104701771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104696400_104699204_104699369_104699894_104700002_104700215_104700347_104701185
ES.22318.3	chr3	+	1082	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	-8	-115	-8	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696341	104701775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ES.22318.4	chr3	+	1146	6	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	108.939249125373	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696363	104701775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104696400_104698799_104698904_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ES.22319.1	chr3	+	2643	15	Antisense	novelGene_ENSMUSG00000002227.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCCCTCCTCCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	104704308	104725546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_104704477_104704589_104704713_104706713_104706924_104707013_104707110_104707259_104707366_104707590_104707748_104708000_104708150_104708271_104708450_104708713_104708876_104709747_104709910_104710107_104710246_104711447_104711704_104711789_104712027_104712217_104712424_104725251
ES.22319.2	chr3	+	4163	2	Antisense	novelGene_ENSMUSG00000002227.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAGCCAGCTCAACAAG	NA	False	NA	NA	False	NA	NA	NA	104713355	104719414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_104716289_104718184
ES.2232.1	chr1	+	3955	23	NNC	ENSMUSG00000026639.19	novel	4056	23	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	2.47341233825687	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGCTTTGCATTAAG	NA	False	NA	NA	False	AATAAA	-38	NA	192984287	193026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_192984339_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ES.2232.2	chr1	+	4040	23	FSM	ENSMUSG00000026639.19	ENSMUST00000016315.16	4056	23	15	1	15	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.42405302290425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCTTTGCATTAAGTC	NA	False	NA	NA	False	AATAAA	-40	NA	192984315	193026185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_192984450_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ES.2232.3	chr1	+	4090	24	NNC	ENSMUSG00000026639.19	novel	4056	23	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.61954266632906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGCTTTGCATTAAG	NA	False	NA	NA	False	AATAAA	-38	NA	192984318	193026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_192984450_192984921_192984977_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ES.22320.1	chr3	+	2018	1	FSM	ENSMUSG00000045576.17	ENSMUST00000199186.2	2455	1	436	1	-62	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTCATTTATTTTTC	18	False	NA	NA	False	ATTAAA	-13	NA	104771756	104773774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104771800_104773800
ES.22320.10	chr3	+	3706	13	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	4	-23	intron_retention	FALSE	canonical	2	4	junction_1	24.243412621897	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGATACAATTTTTC	661	False	NA	6	True	AATACA	-17	NA	104772399	104834153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.11	chr3	+	3465	12	NIC	ENSMUSG00000045576.17	novel	2428	14	NA	NA	4	1213	intron_retention	FALSE	canonical	1	1	junction_7	25.8993602141854	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTCTCCCTCCTTTT	661	False	NA	NA	False	AATAAA	-20	NA	104772399	104803591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104794921_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011
ES.22320.12	chr3	+	1898	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	5	-23	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	24.4356714828205	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGATACAATTTTTC	662	False	NA	6	True	AATACA	-17	NA	104772400	104834153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782203_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.13	chr3	+	2082	17	NNC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	5	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.2007464587808	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGATACAATTTTTC	662	False	NA	6	True	AATACA	-17	NA	104772400	104834153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104794921_104794957_104796005_104796094_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.14	chr3	+	5158	14	NNC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.6058800502395	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCCTGCTTCTTA	662	False	NA	NA	False	AGTAAA	-12	NA	104772400	104837380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799640_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.15	chr3	+	3633	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	11	-23	intron_retention	FALSE	canonical	1	1	junction_7	24.1556390509376	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGATACAATTTTTC	668	False	NA	6	True	AATACA	-17	NA	104772406	104834153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104794921_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.16	chr3	+	1205	10	ISM	ENSMUSG00000045576.17	ENSMUST00000106769.8	2428	14	10410	27	3947	-27	3prime_fragment	FALSE	canonical	3	3	junction_7	22.3264223690781	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAGAATGATACAATT	1092	False	NA	2	True	AATACA	-13	NA	104782228	104834149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826762_104826818_104829502_104829596_104833745
ES.22320.2	chr3	+	5787	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	-59	0	-59	0	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCCTGCTTCTTA	21	False	NA	NA	False	AGTAAA	-12	NA	104771759	104837380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.3	chr3	+	2819	14	NNC	ENSMUSG00000045576.17	novel	3256	14	NA	NA	-37	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.7229205000765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATACAATTTTTCTTT	43	False	NA	9	True	AATACA	-20	NA	104771781	104834156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104772891_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799640_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.4	chr3	+	3244	14	NNC	ENSMUSG00000045576.17	novel	3256	14	NA	NA	-28	10712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5776491999339	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTTTTATTCATGGTC	52	False	NA	NA	False	NA	NA	NA	104771790	104813090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104772891_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104794921_104794957_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104812064
ES.22320.5	chr3	+	2549	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	-25	3204	-25	0	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	55	False	NA	29	True	AATACA	-40	NA	104771793	104834176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.6	chr3	+	2908	16	NNC	ENSMUSG00000045576.17	novel	3256	14	NA	NA	-16	-81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8675134594813	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATTGGCCTTTGTG	64	False	NA	-52	True	NA	NA	NA	104771802	104834095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104772891_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104783004_104783148_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.7	chr3	+	2550	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	-9	-23	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.3639945701884	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGATACAATTTTTC	71	False	NA	6	True	AATACA	-17	NA	104771809	104834153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.8	chr3	+	3151	15	NNC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	5	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.3145596065749	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAATGATACAATTTTT	85	False	NA	5	True	AATACA	-16	NA	104771823	104834152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_104773190_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796002_104796094_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ES.22320.9	chr3	+	5167	11	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	173	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	26.9362209673146	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAAATGTATTTGTCCT	253	False	NA	NA	False	AGTAAA	-4	NA	104771991	104837372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104833745
ES.22321.1	chr3	-	4814	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	48	-1301	-15	1301	3prime_fragment	TRUE	canonical	3	1102	junction_11	86.7727314610285	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACTGTAGTTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	104725573	104700850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.105	chr3	-	3126	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	0	-158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	523.81443279085	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTCTGTCCTTTC	9278	False	NA	-15	True	AATACA	-14	NA	104771716	104730252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104751940_104752137_104752233_104752298_104771655
ES.22321.107	chr3	-	1337	10	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	10	-158	at_least_one_novel_splicesite	FALSE	canonical	1	28	junction_1	502.139963764961	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTCTGTCCTTTC	9288	False	NA	-15	True	AATACA	-14	NA	104771706	104730252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104730858_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.108	chr3	-	2899	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	8	-235	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	612.025849127306	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCATACTATCCATC	9286	False	NA	-92	True	AATAAA	-17	NA	104771708	104730329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104739464_104739513_104741413_104741493_104742040_104742121_104747092_104747306_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.109	chr3	-	1140	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	82	1971	-23	-1971	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTCTGCTACATT	9255	False	NA	NA	False	NA	NA	NA	104771739	104732065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.11	chr3	-	3693	21	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	10	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	393.302428164383	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCGTGTGTCTCATC	NA	False	NA	-20	True	AAGAAA	-26	NA	104725607	104702146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104714277_104714419_104725251
ES.22321.110	chr3	-	992	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	105	2096	0	-2096	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTTAACAGATCTTC	9278	False	NA	NA	False	TATAAA	-27	NA	104771716	104732190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.111	chr3	-	4349	1	FSM	ENSMUSG00000106251.2	ENSMUST00000197199.2	1575	1	-4295	1521	-4295	-1521	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCCTACTATGCCCAG	NA	False	NA	NA	False	NA	NA	NA	104739515	104735166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104735200_104739500
ES.22321.112	chr3	-	195	1	Intergenic	novelGene_18406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGACTCTGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	104736385	104736190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104736200_104736400
ES.22321.113	chr3	-	6094	3	NNC	ENSMUSG00000070372.12	novel	466	3	NA	NA	-5484	-646	intron_retention	FALSE	non_canonical	0	0	junction_2	752.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTCTGGTAATATTA	NA	False	NA	NA	False	NA	NA	NA	104755761	104747849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104748208_104749976_104753508_104753556
ES.22321.114	chr3	-	2596	2	NNC	ENSMUSG00000070372.12	novel	489	3	NA	NA	-411	-646	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTCTGGTAATATTA	2607	False	NA	NA	False	NA	NA	NA	104750688	104747849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104749278_104749520
ES.22321.115	chr3	-	4375	3	NNC	ENSMUSG00000070372.12	novel	489	3	NA	NA	-13	-646	intron_retention	TRUE	non_canonical	0	0	junction_1	649	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTCTGGTAATATTA	9292	False	NA	NA	False	NA	NA	NA	104771702	104747849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104749317_104749436_104752298_104771655
ES.22321.116	chr3	-	3775	2	NNC	ENSMUSG00000070372.12	novel	489	3	NA	NA	-1485	-646	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTCTGGTAATATTA	1533	False	NA	NA	False	NA	NA	NA	104751762	104747849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104749213_104749350
ES.22321.117	chr3	-	505	4	ISM	ENSMUSG00000070372.12	ENSMUST00000195912.2	360	6	0	6426	0	-676	5prime_fragment	FALSE	canonical	3	1298	junction_3	99.5199589138893	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9278	False	NA	NA	False	NA	NA	NA	104771716	104747879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.118	chr3	-	5777	1	Intergenic	novelGene_18407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATAACATTCACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	104764409	104758632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104758600_104764400
ES.22321.12	chr3	-	3304	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-320	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	299.904232174963	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104724990	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104724881
ES.22321.14	chr3	-	3757	17	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-29	4	intron_retention	FALSE	canonical	0	0	junction_6	322.592180382213	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725587	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.15	chr3	-	3663	21	NIC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	-40	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	291.38745254386	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725919	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725672
ES.22321.16	chr3	-	3491	21	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	294.099914994887	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725860	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725750
ES.22321.18	chr3	-	3412	21	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	294.099914994887	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725607	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725407_104725545
ES.22321.19	chr3	-	4987	29	Fusion	ENSMUSG00000070372.12_ENSMUSG00000002227.16	novel	3460	21	NA	NA	-810	4	multi-exon	FALSE	canonical	0	0	junction_5	406.114369824008	1754	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	8363	False	NA	-21	True	AAGAAA	-25	NA	104772631	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704341_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104732249_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.2	chr3	-	3963	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	-21	-381	-21	381	intron_retention	FALSE	canonical	3	1102	junction_11	86.7727314610285	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACCTTTGACCTTTATT	NA	False	NA	NA	False	AGTAAA	-23	NA	104725642	104701770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.21	chr3	-	3452	21	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	-89	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	394.483646682597	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725710	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709743_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725672
ES.22321.22	chr3	-	3491	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	301.727363131105	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725541	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708456_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.23	chr3	-	3514	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	301.261208570692	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725577	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709904_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.25	chr3	-	3509	21	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	44	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	293.265067814085	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725835	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725403_104725672
ES.22321.26	chr3	-	3237	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	299.904232174963	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725591	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712402_104725527
ES.22321.27	chr3	-	3443	21	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	293.056389624932	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725569	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725507
ES.22321.28	chr3	-	3288	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-15	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.904232174963	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725573	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702381_104702693_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.29	chr3	-	3395	21	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	116	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	463.78588540403	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725316	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702646_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104714277_104714419_104725251
ES.22321.3	chr3	-	3751	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	-266	-25	-8	25	multi-exon	FALSE	canonical	3	138	junction_20	265.434944948852	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTCTTGCTTCCTGT	NA	False	NA	0	True	AAAACA	-42	NA	104725887	104702126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ES.22321.30	chr3	-	3355	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	298.643117970861	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725591	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104711892_104712261_104712424_104725251
ES.22321.31	chr3	-	3463	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	406.735643454701	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725542	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707361_104707590_104707750_104708020_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.32	chr3	-	5008	19	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	412.575140930207	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725608	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104705907_104706351_104706925_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.36	chr3	-	3353	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	3242	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	299.904232174963	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104721428	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104721270
ES.22321.38	chr3	-	3509	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	301.64136398275	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725572	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707268_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.4	chr3	-	3258	17	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	12659	25	intron_retention	FALSE	canonical	3	1102	junction_11	85.2987397327768	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTCTTGCTTCCTGT	NA	False	NA	0	True	AAAACA	-42	NA	104712011	104702126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793
ES.22321.42	chr3	-	3649	19	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-7	4	intron_retention	FALSE	canonical	3	1102	junction_10	87.9753051770078	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725628	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.43	chr3	-	3536	20	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	299.904232174963	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725891	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712407_104725533
ES.22321.45	chr3	-	5111	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-35	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	300.343496794057	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725467	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104705927_104706225_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.46	chr3	-	4334	20	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	14	4	intron_retention	FALSE	canonical	2	3	junction_18	403.132924882915	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725544	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104713001_104714277_104714419_104725251
ES.22321.47	chr3	-	3522	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	406.915483271792	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725624	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707084_104707261_104707366_104707608_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.48	chr3	-	3526	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	5	4	at_least_one_novel_splicesite	TRUE	canonical	3	67	junction_1	285.586357984824	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725612	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702670_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.49	chr3	-	3278	19	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	21	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	309.845999183266	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGCGTGTGTCTCAT	NA	False	NA	-21	True	AAGAAA	-25	NA	104725596	104702147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711793_104712030_104712219_104712424_104725251
ES.22321.51	chr3	-	3413	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	300.283780831518	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725569	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707695_104708043_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.53	chr3	-	3786	19	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	24	0	intron_retention	FALSE	canonical	3	1125	junction_5	76.2983908378443	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725593	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.54	chr3	-	2285	9	NIC	ENSMUSG00000002227.16	novel	3498	20	NA	NA	16540	0	intron_retention	FALSE	canonical	3	1102	junction_8	99.6443676280802	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104708130	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104703302_104704082_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002
ES.22321.56	chr3	-	3493	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	300.99230164735	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725573	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708849_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.58	chr3	-	3258	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	1280	0	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_19	283.455058312782	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104723390	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104723323
ES.22321.59	chr3	-	3479	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	300.99230164735	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725593	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709795_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.6	chr3	-	4527	21	NIC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	19	9	intron_retention	FALSE	canonical	2	3	junction_19	393.007875239161	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTGTGTCTCATCAGCC	NA	False	NA	-16	True	AAGAAA	-30	NA	104725860	104702142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104713001_104714277_104714419_104725251
ES.22321.61	chr3	-	3460	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_14	298.426937656629	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725592	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708797_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.64	chr3	-	3144	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	385.578997657942	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725595	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104711979_104725251_104725438_104725573
ES.22321.65	chr3	-	3484	19	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	306.878575134438	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725642	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.67	chr3	-	3594	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	470.370773773142	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725626	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704080_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710153_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
ES.22321.68	chr3	-	3685	20	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	24	0	intron_retention	FALSE	canonical	3	138	junction_19	270.533401504583	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725593	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ES.22321.69	chr3	-	3706	18	NIC	ENSMUSG00000002227.16	novel	3498	20	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1102	junction_11	91.166792655248	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725559	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104712030_104712219_104712424_104725251
ES.22321.7	chr3	-	3484	21	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-21	7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	292.430436172434	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCGTGTGTCTCATCAG	NA	False	NA	-18	True	AAGAAA	-28	NA	104725642	104702144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725403_104725507
ES.22321.70	chr3	-	3397	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	301.638939564334	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725597	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708412_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.72	chr3	-	5164	17	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-43	0	intron_retention	TRUE	non_canonical	0	0	junction_6	516.779295099707	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725475	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704478_104704590_104705903_104706344_104706925_104707261_104707366_104707590_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710153_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.73	chr3	-	3403	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	50	junction_14	290.316896299558	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725544	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708788_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.75	chr3	-	3522	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	298.643117970861	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725587	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712023_104712217_104712424_104725251
ES.22321.77	chr3	-	5788	20	NIC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	26	0	intron_retention	FALSE	canonical	3	12	junction_19	297.33518211997	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725853	104702151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104714419_104725251
ES.22321.78	chr3	-	3464	21	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	395.205171398351	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCCTCTTGCGTGTGT	NA	False	NA	-26	True	AAGAAA	-20	NA	104725441	104702152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104724584_104724669_104725251
ES.22321.8	chr3	-	3437	21	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-5	7	combination_of_known_splicesites	FALSE	canonical	3	106	junction_20	272.054755518076	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCGTGTGTCTCATCAG	NA	False	NA	-18	True	AAGAAA	-28	NA	104725626	104702144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
ES.22321.82	chr3	-	3538	20	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	9	-2	intron_retention	FALSE	canonical	3	106	junction_19	277.960159763072	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGCCTCTTGCGTGTG	NA	False	NA	-27	True	AAGAAA	-19	NA	104725608	104702153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725573
ES.22321.83	chr3	-	3531	20	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	300.283780831518	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGCCTCTTGCGTGTG	NA	False	NA	-27	True	AAGAAA	-19	NA	104725602	104702153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707741_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.85	chr3	-	3706	19	NNC	ENSMUSG00000002227.16	novel	3584	21	NA	NA	97	-2	intron_retention	FALSE	canonical	1	2	junction_15	308.090034139052	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGCCTCTTGCGTGTG	NA	False	NA	-27	True	AAGAAA	-19	NA	104725782	104702153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104702557_104702640_104702763_104703009_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710153_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.87	chr3	-	3584	22	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	441.236502109301	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAAGCCTCTTGCGTGTG	NA	False	NA	-27	True	AAGAAA	-19	NA	104725606	104702153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104714277_104714419_104725251_104725473_104725573
ES.22321.89	chr3	-	2689	15	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	46	2143	-17	-2143	intron_retention	FALSE	canonical	3	1102	junction_6	86.2293157688218	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGCAGGTCAGGCCCTC	NA	False	NA	NA	False	NA	NA	NA	104725575	104704294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ES.22321.9	chr3	-	4520	20	NIC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	-1	7	intron_retention	FALSE	canonical	1	1	junction_18	401.802393515647	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCGTGTGTCTCATCAG	NA	False	NA	-18	True	AAGAAA	-28	NA	104725559	104702144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104714277_104714419_104725251
ES.22321.90	chr3	-	9293	10	NNC	ENSMUSG00000002227.16	novel	3460	21	NA	NA	5218	-4093	intron_retention	TRUE	non_canonical	0	0	junction_6	550.053353192238	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	104719452	104706244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104706925_104707013_104707112_104707261_104707366_104707590_104708869_104709741_104709911_104710108_104710478_104710689_104711709_104711793_104712030_104712219_104716298_104718190
ES.22321.91	chr3	-	342	1	Intergenic	novelGene_18405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	104729825	104729483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104729500_104729800
ES.22321.92	chr3	-	3073	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	117	3	12	-3	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCTCCTTCCTGAGTG	9290	False	NA	NA	False	AGTAAA	-19	NA	104771704	104730097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.93	chr3	-	4065	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	-1026	154	-1026	-154	multi-exon	FALSE	canonical	3	308	junction_2	396.900211360208	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	8147	False	NA	-11	True	AATACA	-18	NA	104772847	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.95	chr3	-	3547	10	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	-519	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	476.853524628494	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	8654	False	NA	-11	True	AATACA	-18	NA	104772340	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750018_104752233_104752298_104771655
ES.22321.96	chr3	-	3339	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	-520	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	490.598664898306	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	8653	False	NA	-11	True	AATACA	-18	NA	104772341	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655_104771770_104771989
ES.22321.97	chr3	-	3640	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	-514	-154	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	532.597230559829	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	8659	False	NA	-11	True	AATACA	-18	NA	104772335	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104732441_104732722_104732786_104735240_104735328_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.98	chr3	-	7898	9	NIC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	13	-154	intron_retention	FALSE	canonical	3	308	junction_2	414.264087720623	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	9291	False	NA	-11	True	AATACA	-18	NA	104771703	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22321.99	chr3	-	9034	9	NIC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	-496	-154	intron_retention	FALSE	canonical	3	308	junction_2	402.222497506045	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTCCTTTCTGTC	8677	False	NA	-11	True	AATACA	-18	NA	104772317	104730248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_104732441_104732722_104732786_104735842_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ES.22322.1	chr3	-	212	1	Intergenic	novelGene_18408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAATCAAAATGAGTG	6552	False	NA	NA	False	NA	NA	NA	104774442	104774230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104774200_104774400
ES.22323.1	chr3	-	4796	1	Antisense	novelGene_ENSMUSG00000045576.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTATTTCTAAGGGAAG	3808	False	NA	NA	False	NA	NA	NA	104790649	104785853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_104785900_104790600
ES.22324.1	chr3	-	204	1	Intergenic	novelGene_18409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGGTCTTTGAGGTTC	2686	False	NA	NA	False	NA	NA	NA	104791771	104791567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104791600_104791800
ES.22325.1	chr3	-	1026	1	Intergenic	novelGene_18410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	104849504	104848478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_104848500_104849500
ES.22326.1	chr3	+	126	1	Intergenic	novelGene_18411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTTGTTTTCGAATTAG	NA	False	NA	NA	False	AATAAA	-14	NA	104960499	104960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_104960500_104960600
ES.22327.1	chr3	-	4885	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-34	-17	-31	15	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGGGCTTGTTT	1438	False	NA	4	True	ATTAAA	-32	NA	104960301	104909215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ES.22327.10	chr3	-	3046	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-24	1812	-21	-1812	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATGCTGCCAGCACTT	1448	False	NA	NA	False	NA	NA	NA	104960291	104911044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ES.22327.11	chr3	-	3057	6	FSM	ENSMUSG00000062127.12	ENSMUST00000197437.5	681	6	-40	-2336	-40	-1812	multi-exon	FALSE	canonical	3	7	junction_4	30.009331881933	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATGCTGCCAGCACTT	1429	False	NA	NA	False	NA	NA	NA	104960310	104911044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940069_104946180_104946304_104960215
ES.22327.12	chr3	-	3069	6	NNC	ENSMUSG00000062127.12	novel	4834	6	NA	NA	16	-1828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.779213765137	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTACATTCACTCTC	1514	False	NA	NA	False	NA	NA	NA	104960225	104911060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960110
ES.22327.3	chr3	-	5486	7	NNC	ENSMUSG00000062127.12	novel	4834	6	NA	NA	-5857	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	35.9556053426382	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCTGGGGGAAAAGTC	NA	False	NA	-13	True	ATTAAA	-15	NA	104966319	104909232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960348_104960597_104965863
ES.22327.5	chr3	-	3414	5	NNC	ENSMUSG00000062127.12	novel	4834	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.8747759849436	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCTGGGGGAAAAGTC	1469	False	NA	-13	True	ATTAAA	-15	NA	104960270	104909232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104912309_104918687_104918740_104939968_104940077_104946180_104946304_104960215
ES.22327.6	chr3	-	5575	7	NNC	ENSMUSG00000062127.12	novel	4834	6	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5621706862991	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTCTGGGGGAAAAGT	1458	False	NA	-14	True	ATTAAA	-14	NA	104960281	104909233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104913445_104915263_104915372_104918508_104918740_104924614_104925396_104940021_104940077_104946180_104946304_104960215
ES.22327.7	chr3	-	4910	7	NNC	ENSMUSG00000062127.12	novel	4834	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.3348213989151	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTCTGGGGGAAAAGT	1460	False	NA	-14	True	ATTAAA	-14	NA	104960279	104909233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_104913445_104915263_104915372_104918508_104918740_104929457_104929496_104939941_104940077_104946180_104946304_104960215
ES.22327.8	chr3	-	4830	6	FSM	ENSMUSG00000062127.12	ENSMUST00000197437.5	681	6	-2	-4147	-2	-1	multi-exon	FALSE	canonical	3	7	junction_4	30.009331881933	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTCTGGGGGAAAAGT	1467	False	NA	-14	True	ATTAAA	-14	NA	104960272	104909233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940069_104946180_104946304_104960215
ES.22327.9	chr3	-	4404	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	-21	451	-18	-451	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGTGTTGTGCTCTT	1451	False	NA	NA	False	TTTAAA	-11	NA	104960288	104909683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ES.22328.1	chr3	+	7194	8	NIC	ENSMUSG00000040896.17	novel	7169	7	NA	NA	30	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.349927106111883	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTCTAGTGAGAATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	105359675	105581316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105360034_105366054_105367238_105565926_105566090_105572337_105572440_105572772_105572863_105574277_105574335_105575395_105575644_105576323
ES.22328.2	chr3	+	176	1	Intergenic	novelGene_18413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	105518025	105518201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_105518000_105518200
ES.22329.1	chr3	-	238	1	Intergenic	novelGene_18412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTACCAAAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	105430418	105430180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_105430200_105430400
ES.2233.1	chr1	-	175	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAACAAAGAG	NA	False	NA	NA	False	NA	NA	NA	193075312	193075137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_193075100_193075300
ES.22330.1	chr3	+	1964	1	Antisense	novelGene_ENSMUSG00000027905.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGATTGACATCACACT	NA	False	NA	NA	False	NA	NA	NA	105587967	105589931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_105588000_105589900
ES.22330.2	chr3	+	166	1	Antisense	novelGene_ENSMUSG00000027905.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAACAGTCT	NA	False	NA	NA	False	NA	NA	NA	105589147	105589313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_105589100_105589300
ES.22331.1	chr3	-	2782	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	123	0	1	0	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105594767	105585585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.10	chr3	-	4941	10	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	14	-5	intron_retention	FALSE	canonical	3	276	junction_2	22.3695118795291	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594746	105585590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105594050_105594439
ES.22331.12	chr3	-	5692	9	NIC	ENSMUSG00000027905.16	novel	1264	10	NA	NA	17	-5	intron_retention	FALSE	canonical	3	276	junction_2	23.2375638783415	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594743	105585590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105594050_105594439
ES.22331.13	chr3	-	4442	10	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	276	junction_2	23.047990726812	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594770	105585590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.14	chr3	-	4761	9	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	4	-5	intron_retention	FALSE	canonical	3	276	junction_2	24.3002057604457	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594764	105585590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.17	chr3	-	4785	5	NNC	ENSMUSG00000027905.16	novel	1264	10	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	134.3223734156	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATGTCAGTTTATTC	NA	False	NA	-7	True	AATAAA	-16	NA	105594767	105585592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105589162_105592426_105594050_105594439
ES.22331.2	chr3	-	5634	8	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_3	109.257792885096	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105594763	105585585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105587972_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105594050_105594439
ES.22331.20	chr3	-	5605	7	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	4	-7	intron_retention	FALSE	canonical	3	276	junction_2	23.5708152878371	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATGTCAGTTTATTC	NA	False	NA	-7	True	AATAAA	-16	NA	105594764	105585592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105590332_105590468_105590612_105590731_105591770_105593954_105594050_105594439
ES.22331.21	chr3	-	3093	10	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	276	junction_2	23.6757937538859	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTAATGTCAGTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	105594762	105585594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.22	chr3	-	4588	8	NIC	ENSMUSG00000027905.16	novel	1264	10	NA	NA	4	-9	intron_retention	FALSE	canonical	1	1	junction_6	108.916369339985	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTAATGTCAGTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	105594764	105585594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105593954_105594050_105594439
ES.22331.23	chr3	-	2446	11	NNC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	452	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.7867831790509	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCAAAATAAAAACAG	NA	False	NA	-37	True	AAGAAA	-35	NA	105594308	105585622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594279
ES.22331.24	chr3	-	2161	2	ISM	ENSMUSG00000027905.16	ENSMUST00000132008.2	2257	7	-5	3410	3	-3410	5prime_fragment	FALSE	canonical	3	347	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCCCTTGTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	105594765	105592214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_105594050_105594439
ES.22331.25	chr3	-	2551	1	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	3	-3410	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCCCTTGTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	105594765	105592214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105592200_105594800
ES.22331.26	chr3	-	676	3	NNC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	2	-3437	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	173	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105594766	105592241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105592496_105593954_105594050_105594439
ES.22331.3	chr3	-	2865	12	NNC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	118.344224074945	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCAGTTTATTCTGTCG	NA	False	NA	-2	True	AATAAA	-21	NA	105594698	105585587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591345_105591500_105591600_105591770_105593954_105594050_105594439
ES.22331.4	chr3	-	2794	11	NNC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.8031982397189	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCAGTTTATTCTGTCG	NA	False	NA	-2	True	AATAAA	-21	NA	105594756	105585587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590872_105591600_105591770_105593954_105594050_105594439
ES.22331.5	chr3	-	4991	7	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	276	junction_2	25.269656815152	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCAGTTTATTCTGTCG	NA	False	NA	-2	True	AATAAA	-21	NA	105594762	105585587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.6	chr3	-	2824	11	NNC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.6014957145451	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCAGTTTATTCTGTC	NA	False	NA	-3	True	AATAAA	-20	NA	105594754	105585588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105588030_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22331.7	chr3	-	4444	6	NNC	ENSMUSG00000027905.16	novel	1264	10	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	123.271083389415	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCAGTTTATTCTGTC	NA	False	NA	-3	True	AATAAA	-20	NA	105594747	105585588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105589162_105592426_105594050_105594439
ES.22331.9	chr3	-	2868	10	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	2	-5	intron_retention	FALSE	canonical	3	276	junction_2	22.1610268514595	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTCAGTTTATTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	105594766	105585590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ES.22332.1	chr3	-	2256	1	FSM	ENSMUSG00000106317.2	ENSMUST00000198060.2	1247	1	-232	-777	-232	777	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTGTGTGGCTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	105634695	105632439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105632400_105634700
ES.22332.10	chr3	-	5725	7	NIC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	-31	29	intron_retention	FALSE	canonical	2	9	junction_2	161.025619079698	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTTTGTGTCTTTT	NA	False	NA	-15	True	ATTAAA	-38	NA	105708683	105635600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105636281_105639271_105639388_105642380_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.11	chr3	-	1183	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	42	1182	-9	-135	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGAAAAATGGGTCTTT	NA	False	NA	0	True	ATTAAA	-18	NA	105708610	105635764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.12	chr3	-	2788	7	NIC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	-3	-139	intron_retention	FALSE	canonical	3	409	junction_6	15.1483405765193	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTGGAAAAATGGGT	NA	False	NA	-4	True	ATTAAA	-14	NA	105708604	105635768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105636281_105639271_105639388_105645070_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.13	chr3	-	2557	2	ISM	ENSMUSG00000068798.11	ENSMUST00000197094.5	782	6	-68	19244	-17	-9991	5prime_fragment	FALSE	canonical	3	409	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGACAAAAGAATGAGAT	NA	False	NA	NA	False	NA	NA	NA	105708669	105655202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_105657645_105708554
ES.22332.2	chr3	-	3837	8	FSM	ENSMUSG00000106317.2_ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-53	-1377	-53	11	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAGTCACTTTAAAATA	NA	False	NA	NA	False	AATAAA	-18	NA	105708705	105633205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.3	chr3	-	2448	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-23	-18	-23	18	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTATACATGTCTGT	NA	False	NA	0	True	AATAAA	-30	NA	105708675	105634564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.4	chr3	-	4975	2	ISM	ENSMUSG00000068798.11	ENSMUST00000199969.5	1377	8	14405	-356	14405	356	intron_retention	FALSE	canonical	3	442	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCAGGGTTTGACTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	105643239	105635273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_105636281_105639271
ES.22332.5	chr3	-	1426	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	-30	1011	-30	36	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTCTTTTTGTTATT	NA	False	NA	-8	True	ATTAAA	-45	NA	105708682	105635593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.6	chr3	-	7072	7	NIC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	2	31	intron_retention	FALSE	canonical	3	409	junction_6	25.6368874865885	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTCTTTTTG	NA	False	NA	-13	True	ATTAAA	-40	NA	105708650	105635598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105636281_105639271_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.7	chr3	-	4097	8	NIC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	-16	31	intron_retention	FALSE	canonical	2	9	junction_2	155.61372899928	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTCTTTTTG	NA	False	NA	-13	True	ATTAAA	-40	NA	105708668	105635598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105636281_105639271_105639388_105642380_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ES.22332.8	chr3	-	1389	8	NNC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	-4	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	157.860568805745	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTCTTTTTG	NA	False	NA	-13	True	ATTAAA	-40	NA	105708656	105635598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653225_105653289_105657560_105657645_105708554
ES.22332.9	chr3	-	1289	7	NNC	ENSMUSG00000068798.11	novel	2407	8	NA	NA	-22	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	168.541455500486	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGTTTGTGTCTTTT	NA	False	NA	-15	True	ATTAAA	-38	NA	105708674	105635600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105657613_105657645_105708554
ES.22333.1	chr3	+	160	1	Intergenic	novelGene_18414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	105763727	105763887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_105763700_105763900
ES.22334.1	chr3	-	172	1	Intergenic	novelGene_18415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	105828730	105828558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_105828600_105828700
ES.22335.1	chr3	+	234	2	Antisense	novelGene_ENSMUSG00000000563.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACACAAATGGAAGC	NA	False	NA	NA	False	NA	NA	NA	105860676	105860943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_105860784_105860816
ES.22336.1	chr3	-	2887	7	Fusion	ENSMUSG00000000563.18_ENSMUSG00000074342.5	novel	2599	6	NA	NA	-2	4	multi-exon	FALSE	canonical	0	0	junction_1	2159.68311075697	678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAGGAGATGTCAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	105866582	105831669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_105833915_105834183_105834234_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.11	chr3	-	1118	7	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1738.84055399632	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAATTTATAAGTTTC	NA	False	NA	-28	True	AATAAA	-8	NA	105866579	105850021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850371_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.12	chr3	-	1118	7	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1716.15572493356	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAATTTATAAGTTTC	NA	False	NA	-28	True	AATAAA	-8	NA	105866573	105850021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863351_105866173_105866215_105866463
ES.22336.13	chr3	-	4955	5	NIC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	15	37	intron_retention	FALSE	canonical	3	4727	junction_4	129.095652521686	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCAGTAAGGTATTTCT	NA	False	NA	-14	True	AATAAA	-33	NA	105866547	105850176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105850380_105851002_105851183_105858906_105863358_105866177_105866215_105866463
ES.22336.14	chr3	-	1014	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	793	164	-30	36	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGTAAGGTATTTC	NA	False	NA	-15	True	AATAAA	-32	NA	105866622	105850177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.15	chr3	-	933	7	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	15	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1738.84055399632	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGTAAGGTATTTC	NA	False	NA	-15	True	AATAAA	-32	NA	105866547	105850177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850374_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.16	chr3	-	3771	6	NIC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	3	36	intron_retention	FALSE	canonical	3	4041	junction_4	317.931187523338	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGTAAGGTATTTC	NA	False	NA	-15	True	AATAAA	-32	NA	105866559	105850177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105866215_105866463
ES.22336.17	chr3	-	758	6	NIC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	16	36	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1846.06060572236	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGTAAGGTATTTC	NA	False	NA	-15	True	AATAAA	-32	NA	105866546	105850177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105850380_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.19	chr3	-	5347	2	FSM	ENSMUSG00000000563.18	ENSMUST00000123959.2	407	2	-17	-4923	1	1	multi-exon	FALSE	canonical	3	4727	junction_1	0	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGAAAAAAACCTAT	NA	False	NA	NA	False	GATAAA	-24	NA	105866579	105860983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105866215_105866463
ES.22336.2	chr3	-	1213	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	769	-11	-54	11	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTCTGAAATAGCACTT	NA	False	NA	-9	True	AATAAA	-27	NA	105866646	105850002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ES.22336.20	chr3	-	781	4	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_2	2075.71760014592	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGAAAAAAACCTAT	NA	False	NA	NA	False	GATAAA	-24	NA	105866557	105860983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105861498_105863211_105863348_105866177_105866215_105866463
ES.22336.21	chr3	-	2501	3	FSM	ENSMUSG00000000563.18	ENSMUST00000153666.2	2527	3	27	-1	9	1	multi-exon	FALSE	canonical	3	4727	junction_2	168.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGAAAAAAACCTAT	NA	False	NA	NA	False	GATAAA	-24	NA	105866553	105860983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_105863358_105866177_105866215_105866463
ES.22336.3	chr3	-	1100	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1822.08072269041	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATACTCTGAAATAGC	NA	False	NA	-13	True	AATAAA	-23	NA	105866554	105850006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866443
ES.22336.4	chr3	-	5163	5	NIC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	4727	junction_4	129.095652521686	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTTTCATACTCTGAA	NA	False	NA	-18	True	AATAAA	-18	NA	105866590	105850011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105850380_105851002_105851183_105858906_105863358_105866177_105866215_105866463
ES.22336.5	chr3	-	843	5	NIC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2118.37595518359	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAAGTTTCATACTC	NA	False	NA	-22	True	AATAAA	-14	NA	105866579	105850015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_105850380_105851002_105851183_105863211_105863358_105866177_105866215_105866463
ES.22336.7	chr3	-	1123	6	NNC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1822.08072269041	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866582	105850017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866437
ES.22336.8	chr3	-	1167	7	NNC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_6	1728.67248359993	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866595	105850017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866443
ES.22337.1	chr3	+	3672	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	16	-6	16	6	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTGTTGTCTCA	NA	False	NA	18	True	AATAAA	-37	NA	105866700	105877082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.10	chr3	+	3902	7	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	1559	53	674	intron_retention	FALSE	canonical	3	910	junction_4	55.30722275516	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTACTTATTACCT	NA	False	NA	24	True	AATAAA	-28	NA	105866737	105875517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396
ES.22337.11	chr3	+	3151	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	54	661	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCCTCCCCAGAGCTG	NA	False	NA	11	True	AATAAA	-15	NA	105866738	105875504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.12	chr3	+	7579	7	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	54	-387	intron_retention	FALSE	canonical	3	940	junction_2	49.697976708201	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866738	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105869075_105869330_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.13	chr3	+	4336	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	54	-387	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866738	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.14	chr3	+	3914	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	54	-286	54	9	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTCATGTCTAATCTT	NA	False	NA	NA	False	NA	NA	NA	105866738	105877362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.15	chr3	+	8800	4	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-42	-392	intron_retention	FALSE	canonical	3	940	junction_1	58.9085920916654	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGCTTGGGGGCTC	NA	False	NA	3	True	AATAAA	-14	NA	105866781	105876684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105871829_105871938_105873742_105874478
ES.22337.16	chr3	+	3177	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-38	-387	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866785	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
ES.22337.19	chr3	+	4673	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-32	3	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTTTTGTTGTTGTC	NA	False	NA	15	True	AATAAA	-34	NA	105866791	105877079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.2	chr3	+	2101	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	22	1559	22	674	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTACTTATTACCT	NA	False	NA	24	True	AATAAA	-28	NA	105866706	105875517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.20	chr3	+	4061	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-32	3	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTTTTGTTGTTGTC	NA	False	NA	15	True	AATAAA	-34	NA	105866791	105877079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.21	chr3	+	3171	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-29	-390	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	305.26968445444	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	5	True	AATAAA	-16	NA	105866794	105876686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867004_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.22	chr3	+	5755	7	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-29	-390	intron_retention	FALSE	canonical	3	910	junction_3	55.4466710753074	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	5	True	AATAAA	-16	NA	105866794	105876686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.23	chr3	+	7938	4	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-28	659	intron_retention	FALSE	canonical	3	940	junction_1	64.251242962469	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCCCTCCCCAGAGC	NA	False	NA	9	True	AATAAA	-13	NA	105866795	105875502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105871829_105871938_105871994_105872396
ES.22337.25	chr3	+	6597	6	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-28	667	intron_retention	FALSE	canonical	3	940	junction_1	54.4411608987171	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCAGAGCTGTTACTT	NA	False	NA	17	True	AATAAA	-21	NA	105866795	105875510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.26	chr3	+	4836	6	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-28	671	intron_retention	FALSE	canonical	3	910	junction_2	60.6893730400966	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCTGTTACTTATTA	NA	False	NA	21	True	AATAAA	-25	NA	105866795	105875514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.27	chr3	+	4860	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-28	662	intron_retention	FALSE	canonical	3	940	junction_3	46.379534543695	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105866795	105875505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.28	chr3	+	5556	5	ISM	ENSMUSG00000000561.15	ENSMUST00000128005.2	911	8	-2137	-659	-23	659	intron_retention	FALSE	canonical	3	910	junction_2	66.3979480104619	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCCCTCCCCAGAGC	NA	False	NA	9	True	AATAAA	-13	NA	105866800	105875502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396
ES.22337.3	chr3	+	3740	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	38	-387	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866722	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.30	chr3	+	6034	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-20	1711	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTCCAAAGTTTGAGT	NA	False	NA	NA	False	ATTAAA	-24	NA	105866803	105879064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.31	chr3	+	2583	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-20	658	intron_retention	FALSE	canonical	3	115	junction_7	291.188056717648	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTTCCCTCCCCAGAG	NA	False	NA	8	True	AATAAA	-12	NA	105866803	105875501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873173_105873672_105873742_105874478
ES.22337.33	chr3	+	5454	20	NNC	ENSMUSG00000105852.5	novel	2566	18	NA	NA	-4	2824	intron_retention	FALSE	canonical	0	0	junction_12	468.97761731256	691	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGTGGTCTCTGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	105866814	105894740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105872644_105872739_105873080_105873173_105873672_105873742_105874478_105874676_105881728_105881862_105882154_105882360_105883286_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105892368_105892505_105893384
ES.22337.34	chr3	+	5461	7	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-8	671	intron_retention	FALSE	canonical	3	940	junction_3	45.8609008003792	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGCTGTTACTTATTA	NA	False	NA	21	True	AATAAA	-25	NA	105866815	105875514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.35	chr3	+	2161	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	361	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGTTCACCCTTTCC	NA	False	NA	14	True	AATAAA	-17	NA	105866816	105875204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.36	chr3	+	2070	11	NNC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	659	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	390.575780099074	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCCCTCCCCAGAGC	NA	False	NA	9	True	AATAAA	-13	NA	105866816	105875502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105872644_105872739_105873080_105873190_105873672_105873742_105874478
ES.22337.37	chr3	+	3132	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	-390	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	383.503440517668	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	5	True	AATAAA	-16	NA	105866816	105876686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867004_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
ES.22337.38	chr3	+	3257	11	NNC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	-387	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	390.575780099074	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866816	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105872644_105872739_105873080_105873190_105873672_105873742_105874478
ES.22337.39	chr3	+	8011	5	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-7	-390	intron_retention	FALSE	canonical	3	940	junction_2	27.5896266738062	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	5	True	AATAAA	-16	NA	105866816	105876686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105869075_105869330_105872469_105873080_105873742_105874478
ES.22337.40	chr3	+	4032	19	NIC	ENSMUSG00000105852.5	novel	2566	18	NA	NA	-2	2824	intron_retention	FALSE	canonical	1	2	junction_12	484.454357696737	691	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGTGGTCTCTGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	105866816	105894740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478_105874676_105881728_105882360_105883286_105883344_105884979_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105892368_105892505_105893384
ES.22337.41	chr3	+	1659	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-6	360	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTTGTTCACCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	105866817	105875203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
ES.22337.42	chr3	+	4233	16	NIC	ENSMUSG00000105852.5	novel	2566	18	NA	NA	-1	228	intron_retention	FALSE	canonical	2	2	junction_11	486.603584952771	690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGTTGAAAATACTATT	NA	False	NA	NA	False	NA	NA	NA	105866817	105892144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478_105874676_105881728_105882360_105883286_105883344_105884979_105885146_105885589_105885715_105887213_105887323_105887407_105888666_105891888
ES.22337.44	chr3	+	6179	6	NIC	ENSMUSG00000000561.15	novel	4286	9	NA	NA	-6	665	intron_retention	FALSE	canonical	3	12	junction_1	396.647954740725	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCCAGAGCTGTTAC	NA	False	NA	15	True	AATAAA	-19	NA	105866817	105875508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867004_105867268_105867455_105868932_105869075_105869330_105871829_105871938_105871994_105872396
ES.22337.46	chr3	+	7651	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	2731	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTCTTGCTTATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	105866818	105880084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.47	chr3	+	3537	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	6	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTGTTGTCTCA	NA	False	NA	18	True	AATAAA	-37	NA	105866818	105877082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
ES.22337.48	chr3	+	6266	9	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	134	-1981	-5	1704	intron_retention	FALSE	canonical	3	910	junction_4	52.6165373243052	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACAATGTCTCCAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	105866818	105879057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672
ES.22337.5	chr3	+	3249	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	46	387	46	-387	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866730	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.50	chr3	+	5978	6	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	0	-392	intron_retention	FALSE	canonical	3	910	junction_2	60.6893730400966	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGCTTGGGGGCTC	NA	False	NA	3	True	AATAAA	-14	NA	105866823	105876684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.51	chr3	+	4631	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	0	-390	intron_retention	FALSE	canonical	3	910	junction_3	52.7843490061211	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTGGGGGCTCTA	NA	False	NA	5	True	AATAAA	-16	NA	105866823	105876686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.52	chr3	+	2766	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	0	361	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGTTCACCCTTTCC	NA	False	NA	14	True	AATAAA	-17	NA	105866823	105875204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.53	chr3	+	5278	6	NIC	ENSMUSG00000000561.15	novel	1095	8	NA	NA	3	661	intron_retention	FALSE	canonical	3	910	junction_3	59.5899320355377	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCCTCCCCAGAGCTG	NA	False	NA	11	True	AATAAA	-15	NA	105866826	105875504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396
ES.22337.54	chr3	+	4983	7	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	144	387	-1	-387	intron_retention	FALSE	canonical	3	910	junction_4	55.30722275516	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGGGGCTCTATCT	NA	False	NA	8	True	AATAAA	-19	NA	105866828	105876689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396
ES.22337.55	chr3	+	6747	16	NIC	ENSMUSG00000105852.5	novel	2566	18	NA	NA	14	2824	intron_retention	FALSE	canonical	1	2	junction_14	488.900244312568	691	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGTGGTCTCTGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	105866832	105894740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478_105874676_105881728_105882360_105883286_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105892368_105892505_105893384
ES.22337.56	chr3	+	4193	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	150	-661	5	384	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCACTCCCTTGTCCC	NA	False	NA	NA	False	AGTAAA	-34	NA	105866834	105877737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.57	chr3	+	4375	17	NIC	ENSMUSG00000105852.5	novel	2566	18	NA	NA	24	214	intron_retention	FALSE	canonical	2	2	junction_16	481.255064908412	690	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGGCCCTCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	105866842	105892130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478_105874676_105881728_105882360_105883286_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105891888
ES.22337.59	chr3	+	6726	5	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	569	662	intron_retention	FALSE	canonical	3	940	junction_1	59.9723894804934	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTCCCCAGAGCTGT	NA	False	NA	12	True	AATAAA	-16	NA	105867398	105875505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105871829_105871938_105871994_105872396_105872469_105873080
ES.22337.6	chr3	+	2058	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	47	673	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866731	105875516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
ES.22337.60	chr3	+	5682	4	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-220	659	intron_retention	FALSE	canonical	3	940	junction_1	58.9085920916654	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCCCTCCCCAGAGC	NA	False	NA	9	True	AATAAA	-13	NA	105868717	105875502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105869075_105869330_105871829_105871938_105873742_105874478
ES.22337.61	chr3	+	4435	2	ISM	ENSMUSG00000105852.5	ENSMUST00000137168.3	1580	4	-3398	8523	3214	-8523	5prime_fragment	FALSE	canonical	3	1004	junction_1	0	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGTTCACCCTTTCC	NA	False	NA	14	True	AATAAA	-17	NA	105870032	105875204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_105873742_105874478
ES.22337.62	chr3	+	4283	4	NIC	ENSMUSG00000000561.15	novel	911	8	NA	NA	-613	-392	intron_retention	FALSE	canonical	3	957	junction_2	52.427728032661	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGCTTGGGGGCTC	246	False	NA	3	True	AATAAA	-14	NA	105871151	105876684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105871829_105871938_105871994_105872396_105873742_105874478
ES.22337.63	chr3	+	4112	7	NIC	ENSMUSG00000074340.10	novel	2616	11	NA	NA	-1943	0	intron_retention	FALSE	canonical	0	0	junction_2	2.54405625374562	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGGCCCTCAAAGTG	8178	False	NA	NA	False	NA	NA	NA	105879083	105892130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105882360_105883286_105883344_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105891888
ES.22337.7	chr3	+	3509	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	120	53	-120	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGGGCATCTAACAATCC	NA	False	NA	NA	False	AGTAAA	-45	NA	105866737	105876956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22337.8	chr3	+	2553	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	53	674	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTACTTATTACCT	NA	False	NA	24	True	AATAAA	-28	NA	105866737	105875517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
ES.22337.9	chr3	+	1757	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	53	1872	53	361	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTGTTCACCCTTTCC	NA	False	NA	14	True	AATAAA	-17	NA	105866737	105875204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ES.22338.1	chr3	+	424	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTTATTATTTATTCA	NA	False	NA	NA	False	AATAAA	-45	NA	105941979	105942403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_105942000_105942400
ES.22339.1	chr3	-	136	1	Intergenic	novelGene_18416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	106369177	106369041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_106369000_106369200
ES.2234.1	chr1	-	234	1	FSM	ENSMUSG00000065533.3	ENSMUST00000083599.3	68	1	65	-231	65	231	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCTCTCTGCCCTA	8217	False	NA	NA	False	ATTAAA	-23	NA	193189773	193189539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_193189500_193189800
ES.22340.1	chr3	+	3474	12	FSM	ENSMUSG00000027901.13	ENSMUST00000029508.11	4050	12	21	555	2	-555	multi-exon	FALSE	canonical	1	2	junction_1	1.52662323852242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGGAGGATTACCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	106389767	106409791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106390030_106394188_106394365_106395166_106395280_106395887_106395958_106397650_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
ES.22340.2	chr3	+	1886	12	FSM	ENSMUSG00000027901.13	ENSMUST00000029508.11	4050	12	186	1978	167	10	multi-exon	FALSE	canonical	1	2	junction_1	1.52662323852242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAGGAGGCACTGCATG	NA	False	NA	NA	False	AATAAA	-23	NA	106389932	106408368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106390030_106394188_106394365_106395166_106395280_106395887_106395958_106397650_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
ES.22340.3	chr3	+	3299	8	ISM	ENSMUSG00000027901.13	ENSMUST00000183271.2	2050	12	4341	-1935	-2784	-53	3prime_fragment	FALSE	canonical	1	3	junction_4	1.51185789203691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTCTGAGATCATATA	NA	False	NA	NA	False	AATAAA	-13	NA	106397706	106410293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
ES.22341.1	chr3	+	3517	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	-297	51	-297	-51	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGTCAACTGTGGTCT	NA	False	NA	NA	False	CATAAA	-22	NA	106454816	106483155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.11	chr3	+	2439	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	60	772	-6	273	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	106455173	106482434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.13	chr3	+	1153	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	3	-936	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	42.6375325701836	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACCAAAGGATAA	NA	False	NA	-16	True	AAAACA	-24	NA	106455182	106481225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.15	chr3	+	959	7	FSM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	-4	936	-2	-936	multi-exon	FALSE	canonical	1	3	junction_5	45.7298832517887	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACCAAAGGATAA	NA	False	NA	-16	True	AAAACA	-24	NA	106455183	106481225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ES.22341.16	chr3	+	2005	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	44.8862507924652	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	106455189	106482161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.17	chr3	+	2095	10	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	7	-215	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	55.8867903294986	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATAAGGTTGCAAAGTC	NA	False	NA	NA	False	AATAAA	-12	NA	106455203	106481946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106457814_106457992_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.18	chr3	+	1863	7	NIC	ENSMUSG00000027900.16	novel	2035	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	48.2266063035287	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	106455206	106482161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.2	chr3	+	1532	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	-1	1740	-1	-695	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAATGTGTTGCTGTTG	NA	False	NA	NA	False	AATACA	-14	NA	106455112	106481466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.20	chr3	+	1824	10	NNC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	49	-693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.3710779945388	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTGCTGTTGTT	NA	False	NA	NA	False	AATACA	-16	NA	106455245	106481468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_106455483_106457814_106457992_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.21	chr3	+	7268	9	NIC	ENSMUSG00000027900.16	novel	691	7	NA	NA	642	17	intron_retention	FALSE	canonical	1	1	junction_1	53.2353266168247	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGTAAAGTTTCAATTT	NA	False	NA	NA	False	AATAAA	-31	NA	106455838	106482178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106456302_106457814_106457992_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.22	chr3	+	2583	9	NIC	ENSMUSG00000027900.16	novel	691	7	NA	NA	655	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	61.206489647749	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTTGTCATGAAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	106455851	106482159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106456302_106457814_106457992_106459471_106459597_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.23	chr3	+	1853	9	NIC	ENSMUSG00000027900.16	novel	691	7	NA	NA	662	-693	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	42.7563957204066	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTGCTGTTGTT	NA	False	NA	NA	False	AATACA	-16	NA	106455858	106481468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106456302_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.24	chr3	+	9601	5	NIC	ENSMUSG00000027900.16	novel	2035	8	NA	NA	9915	-693	intron_retention	FALSE	canonical	3	123	junction_3	6.26498204307083	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTGCTGTTGTT	82	False	NA	NA	False	AATACA	-16	NA	106465111	106481468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106469133_106473360_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.25	chr3	+	4713	1	FSM	ENSMUSG00000105272.2	ENSMUST00000197233.2	2032	1	-4000	1319	-4000	-1319	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCACCAAAAAT	5891	False	NA	NA	False	NA	NA	NA	106470920	106475633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106470900_106475600
ES.22341.26	chr3	+	2566	1	FSM	ENSMUSG00000105272.2	ENSMUST00000197233.2	2032	1	1264	-1798	1264	1798	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106476184	106478750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106476200_106478800
ES.22341.27	chr3	+	1903	2	Genic_Genomic	ENSMUSG00000105272.2	novel	2032	1	NA	NA	1912	1822	multi-exon	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTGGACCATAGTAATAA	NA	False	NA	NA	False	NA	NA	NA	106476832	106478774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_106477044_106477082
ES.22341.3	chr3	+	1275	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	36	1960	3	-915	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTAGTGTTTGCTAC	NA	False	NA	5	True	AATAAA	-14	NA	106455149	106481246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.4	chr3	+	2369	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	3	247	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	42.6375325701836	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106455149	106482408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.5	chr3	+	2114	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	42.6375325701836	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	106455157	106482161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.6	chr3	+	1847	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	11	-387	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.8439547716975	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACATTGTTCAGTAGTGT	NA	False	NA	3	True	AATAAA	-12	NA	106455157	106481774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106457814_106457992_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.7	chr3	+	1794	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	12	-384	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTTCAGTAGTGTAAA	NA	False	NA	6	True	AATAAA	-15	NA	106455158	106481777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ES.22341.8	chr3	+	1060	8	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	-14	-936	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	44.1906814445151	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACCAAAGGATAA	NA	False	NA	-16	True	AAAACA	-24	NA	106455165	106481225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478926_106479010_106480288_106480382_106480890
ES.22341.9	chr3	+	2688	4	Fusion	ENSMUSG00000027900.16_ENSMUSG00000105272.2	novel	600	5	NA	NA	-13	-1244	multi-exon	FALSE	canonical	3	4	junction_3	43.1354455948547	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCTTTGTATACCCT	NA	False	NA	NA	False	NA	NA	NA	106455166	106475708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_106455237_106459471_106459597_106462479_106462625_106473360
ES.22342.1	chr3	-	3414	8	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	6642	-109	6642	109	3prime_fragment	FALSE	canonical	3	195	junction_5	22.3396782539453	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGTCATCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	106448256	106410189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505
ES.22342.10	chr3	-	2351	2	ISM	ENSMUSG00000040774.16	ENSMUST00000137530.2	357	4	-40	6062	-15	2016	5prime_fragment	FALSE	canonical	3	190	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	106455074	106444647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_106446920_106454995
ES.22342.2	chr3	-	2113	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	-20	721	-20	2	multi-exon	FALSE	canonical	3	190	junction_8	25.7924407530579	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTTCTCAATTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	106455138	106410296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
ES.22342.3	chr3	-	1893	8	NIC	ENSMUSG00000040774.16	novel	2814	9	NA	NA	-18	2	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	84.3154911081963	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTTCTCAATTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	106455077	106410296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420187_106440670_106440819_106446505_106446920_106454995
ES.22342.4	chr3	-	6036	5	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	29924	-1	29924	1	3prime_fragment	FALSE	canonical	3	218	junction_4	17.2536228079786	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTTTCTCAATTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	106424974	106410297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118
ES.22342.5	chr3	-	4149	3	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	39173	-1	39173	1	intron_retention	FALSE	canonical	3	252	junction_2	2.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTTTCTCAATTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	106415725	106410297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_106411061_106411841_106411968_106412465
ES.22342.6	chr3	-	1903	10	NNC	ENSMUSG00000040774.16	novel	2814	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	110.208892563168	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCTTTTTTCTCAATT	NA	False	NA	-7	True	AATAAA	-14	NA	106455046	106410300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106421770_106421910_106438452_106438595_106440670_106440819_106446758_106446920_106454995
ES.22342.7	chr3	-	2341	10	NNC	ENSMUSG00000040774.16	novel	2814	9	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	98.2796463612323	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACCAGCTTTTTTCTC	NA	False	NA	-11	True	AATAAA	-10	NA	106455056	106410304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440113_106440432_106440670_106440819_106446505_106446920_106454995
ES.22342.8	chr3	-	1184	5	NNC	ENSMUSG00000040774.16	novel	357	4	NA	NA	174	-5246	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	114.861601503723	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATTCTGTAGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	106454724	106432594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_106433042_106438452_106438595_106440670_106440819_106446505_106446920_106454691
ES.22342.9	chr3	-	8332	1	NIC	ENSMUSG00000040774.16	novel	2814	9	NA	NA	1964	2061	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGCCTTGTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	106452934	106444602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_106444600_106452900
ES.22343.1	chr3	-	1215	2	Antisense	novelGene_ENSMUSG00000103053.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGACTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	106499687	106498028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_106499125_106499568
ES.22344.1	chr3	+	3098	4	NIC	ENSMUSG00000056260.16	novel	929	3	NA	NA	-21	-2	intron_retention	FALSE	canonical	1	6	junction_1	13.9124245031395	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATGTATGGCTTTGT	NA	False	NA	26	True	AATAAA	-38	NA	106592281	106643888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106592450_106638978_106640459_106641673_106641956_106642720
ES.22344.10	chr3	+	6843	2	ISM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	7526	-449	-3495	449	3prime_fragment	FALSE	canonical	3	40	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106636734	106644342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_106641956_106642720
ES.22344.11	chr3	+	5052	1	Genic_Genomic	ENSMUSG00000056260.16	novel	NA	NA	NA	NA	-904	484	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	106639325	106644377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_106639300_106644400
ES.22344.2	chr3	+	3079	4	NIC	ENSMUSG00000056260.16	novel	929	3	NA	NA	-21	-13	intron_retention	FALSE	canonical	1	1	junction_1	16.062378404209	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTCAATGTGAAAGATG	NA	False	NA	15	True	AATAAA	-27	NA	106592281	106643877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106592450_106638986_106640459_106641673_106641956_106642720
ES.22344.3	chr3	+	1617	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	-19	-669	-19	-1	multi-exon	FALSE	canonical	3	7	junction_1	16.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATGTATGGCTTTGTT	NA	False	NA	27	True	AATAAA	-39	NA	106592283	106643889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106592450_106641673_106641956_106642720
ES.22344.4	chr3	+	2971	4	NIC	ENSMUSG00000056260.16	novel	674	2	NA	NA	-79	0	intron_retention	FALSE	canonical	1	2	junction_1	15.6276108929747	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629129	106643890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106629169_106638978_106640459_106641673_106641956_106642720
ES.22344.5	chr3	+	3764	5	NNC	ENSMUSG00000056260.16	novel	3103	4	NA	NA	-65	0	intron_retention	FALSE	canonical	0	0	junction_1	16.931848688197	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629143	106643890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_106629423_106629943_106630033_106638978_106640923_106641673_106641956_106642720
ES.22344.6	chr3	+	3308	5	NIC	ENSMUSG00000056260.16	novel	3103	4	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_1	17.0934929139717	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106629162	106643893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_106629423_106630172_106630286_106638978_106640459_106641673_106641956_106642720
ES.22344.7	chr3	+	3171	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	-68	0	-25	0	multi-exon	FALSE	canonical	2	11	junction_1	11.8415464455544	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629183	106643890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
ES.22344.8	chr3	+	1633	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	33	3	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629241	106643890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106629423_106641673_106641956_106642720
ES.22344.9	chr3	+	3172	5	NNC	ENSMUSG00000056260.16	novel	3103	4	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_1	17.0934929139717	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629271	106643890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_106629423_106629943_106630033_106638978_106640459_106641673_106641956_106642720
ES.22345.1	chr3	+	5803	2	FSM	ENSMUSG00000056145.6	ENSMUST00000070085.6	5569	2	-259	25	-259	-25	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTGCAGTAATAATTC	NA	False	NA	NA	False	AATAAA	-14	NA	106946560	106961638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_106946887_106956161
ES.22346.1	chr3	+	743	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	-3	3	-3	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	3148	False	NA	9	True	AATAAA	-13	NA	107186311	107191395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ES.22346.2	chr3	+	5086	1	Genic_Genomic	ENSMUSG00000087260.6	novel	NA	NA	NA	NA	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3149	False	NA	12	True	AATAAA	-16	NA	107186312	107191398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_107186300_107191400
ES.22346.3	chr3	+	456	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	6	281	6	-278	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGGACTCCCTTAT	3157	False	NA	NA	False	ATTAAA	-29	NA	107186320	107191117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ES.22346.4	chr3	+	711	4	NNC	ENSMUSG00000087260.6	novel	881	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_3	514.098779959217	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	3157	False	NA	9	True	AATAAA	-13	NA	107186320	107191395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_107186430_107187185_107187248_107189224_107189320_107190950
ES.22346.5	chr3	+	3085	2	NIC	ENSMUSG00000087260.6	novel	743	4	NA	NA	22	0	intron_retention	FALSE	canonical	3	1062	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3173	False	NA	12	True	AATAAA	-16	NA	107186336	107191398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_107187248_107189224
ES.22346.6	chr3	+	737	4	NNC	ENSMUSG00000087260.6	novel	881	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	550.836333829448	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	3175	False	NA	9	True	AATAAA	-13	NA	107186338	107191395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_107186430_107187185_107187248_107189203_107189343_107190950
ES.22347.1	chr3	+	1897	6	FSM	ENSMUSG00000027896.16	ENSMUST00000153322.2	2531	6	-57	691	7	-691	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATGTTGGATGGTCAA	NA	False	NA	NA	False	AATAGA	-41	NA	107198552	107209178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_107198732_107199723_107199842_107205260_107205394_107206151_107206296_107206435_107206598_107208017
ES.22348.1	chr3	+	225	1	Intergenic	novelGene_18417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTTTGAGTGTGGTTT	14	True	NA	NA	False	ACTAAA	-20	NA	107211370	107211595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107211400_107211600
ES.22349.1	chr3	-	6143	1	Antisense	novelGene_ENSMUSG00000027896.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGAAATTAGATCATTAG	9170	False	NA	NA	False	AAGAAA	-32	NA	107212560	107206417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_107206400_107212600
ES.2235.1	chr1	+	177	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	7722	False	NA	NA	False	NA	NA	NA	193215441	193215618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_193215400_193215600
ES.22350.1	chr3	+	272	1	Intergenic	novelGene_18418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAACCAAAAAA	1350	False	NA	NA	False	AATAAA	-30	NA	107217412	107217684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107217400_107217700
ES.22351.1	chr3	-	10106	1	Antisense	novelGene_ENSMUSG00000027896.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTGTTGTAGTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	107222931	107212825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_107212800_107222900
ES.22352.1	chr3	+	176	1	Intergenic	novelGene_18420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACCTTAACACACCAA	445	False	NA	NA	False	NA	NA	NA	107231057	107231233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107231100_107231200
ES.22353.1	chr3	-	5498	1	Intergenic	novelGene_18419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTTGGTCTAGATACA	8357	False	NA	NA	False	NA	NA	NA	107231207	107225709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_107225700_107231200
ES.22354.1	chr3	+	477	1	Intergenic	novelGene_18421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGCTGTGCTTTGCTT	NA	False	NA	NA	False	TATAAA	-16	NA	107241111	107241588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107241100_107241600
ES.22355.1	chr3	-	7627	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	56	-1716	56	2	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGAGCTCCTCCGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	107240361	107232734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107232700_107240400
ES.22355.10	chr3	-	3273	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	53	2641	53	-2641	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATCAGGTGTTGCAAAG	NA	False	NA	NA	False	TTTAAA	-24	NA	107240364	107237091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107237100_107240400
ES.22355.2	chr3	-	3722	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	620	1	48	-1	multi-exon	FALSE	canonical	3	61	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGAGGAGCTCCTCCG	NA	False	NA	NA	False	AATAAA	-13	NA	107240369	107232737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107233621_107237530
ES.22355.3	chr3	-	3709	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	119	515	119	-515	multi-exon	FALSE	canonical	3	61	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGGAAGTGAATTG	NA	False	NA	0	True	AATAAA	-25	NA	107240870	107233251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107233621_107237530
ES.22355.4	chr3	-	7227	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	-62	-1198	-62	-516	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCCTGGAAGTGAATT	NA	False	NA	-1	True	AATAAA	-24	NA	107240479	107233252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107233300_107240500
ES.22355.5	chr3	-	1086	2	NNC	ENSMUSG00000048109.11	novel	4343	2	NA	NA	-111	-524	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTCTGCCTGGA	NA	False	NA	-9	True	AATAAA	-16	NA	107240528	107233260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107233621_107239802
ES.22355.6	chr3	-	5606	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	38	323	38	-323	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAAGCTTTTGTTATA	NA	False	NA	NA	False	ATTAAA	-17	NA	107240379	107234773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107234800_107240400
ES.22355.7	chr3	-	5333	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	53	581	53	-581	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCTTAAGTATGCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	107240364	107235031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107235000_107240400
ES.22355.8	chr3	-	4992	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	56	919	56	-919	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAAGTCTATGTTTCC	NA	False	NA	NA	False	NA	NA	NA	107240361	107235369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107235400_107240400
ES.22355.9	chr3	-	4930	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	-858	1895	-286	-1895	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAAGGGCTTTTGTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	107241275	107236345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107236300_107241300
ES.22356.1	chr3	-	213	1	Intergenic	novelGene_18422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	107254867	107254654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_107254700_107254900
ES.22357.1	chr3	+	167	1	Intergenic	novelGene_18423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8822	False	NA	NA	False	NA	NA	NA	107342617	107342784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107342600_107342800
ES.22358.1	chr3	-	4307	4	NNC	ENSMUSG00000027895.11	novel	3667	4	NA	NA	-703	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.24721912892465	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATCTGCCTCGCCTCT	NA	False	NA	NA	False	AATAAA	-29	NA	107367571	107345619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107346731_107352745_107352950_107354819_107355757_107365516
ES.22358.2	chr3	-	4457	4	FSM	ENSMUSG00000027895.11	ENSMUST00000009617.10	3667	4	-793	3	-793	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCATCTGCCTCGCCT	NA	False	NA	NA	False	AATAAA	-27	NA	107367661	107345621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107346793_107352745_107352950_107354819_107355757_107365516
ES.22358.3	chr3	-	6580	4	FSM	ENSMUSG00000027895.11	ENSMUST00000238670.2	2664	4	1073	-4989	1073	-15	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTCCTCTGAGAGCA	NA	False	NA	NA	False	AATAAA	-15	NA	107365795	107345633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107350794_107352745_107352950_107354819_107355757_107365516
ES.22359.1	chr3	-	4705	12	FSM	ENSMUSG00000027894.15	ENSMUST00000169449.8	6322	12	8	1609	8	-1601	multi-exon	FALSE	canonical	0	0	junction_1	0.287479787288034	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCGTACAGATCTATTT	NA	False	NA	NA	False	NA	NA	NA	107425326	107376467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107378866_107379351_107379515_107380851_107381012_107381587_107381781_107384043_107384237_107384492_107384735_107398735_107398847_107400374_107400557_107401252_107401380_107402981_107403140_107407683_107408057_107424921
ES.2236.1	chr1	+	6773	32	FSM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	-24	4291	-24	-1649	multi-exon	TRUE	canonical	1	2	junction_18	4.73677577525654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCCAACTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	194302108	194494886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.10	chr1	+	3325	19	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	-18125	-1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.72518801243922	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	194468892	194494844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483329_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.11	chr1	+	1314	6	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	853	-1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.74804314527997	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	194487870	194494844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194487989_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.2	chr1	+	10863	32	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.04650588468107	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAATCTTCATATAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	194302136	194499170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194302540_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.3	chr1	+	11015	32	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	39	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	4.86508938181285	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAATCTTCATATAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	194302171	194499170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483329_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.4	chr1	+	6652	32	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	64	-1702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	5.09248492442689	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGGGAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	194302196	194494833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493144_194493316_194494373
ES.2236.5	chr1	+	10921	32	FSM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	112	7	112	-7	multi-exon	FALSE	canonical	1	2	junction_18	4.73677577525654	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAATCTTCATATAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	194302244	194499170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ES.2236.6	chr1	+	4663	22	ISM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	530	18801	530	11440	5prime_fragment	FALSE	canonical	1	2	junction_18	3.52252228741084	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCTCTGCTTCCA	NA	False	NA	NA	False	CATAAA	-13	NA	194302662	194480376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847
ES.2236.7	chr1	+	2133	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	ATTAAA	-36	NA	194402874	194405007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_194402900_194405000
ES.2236.8	chr1	+	2763	1	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	194440731	194443494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_194440700_194443500
ES.2236.9	chr1	+	7737	21	NNC	ENSMUSG00000026640.13	novel	11040	32	NA	NA	15948	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	5.84358622765165	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAATCTTCATATAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	194462822	194499170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373_194496574_194496634
ES.22360.1	chr3	-	194	1	Intergenic	novelGene_18424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGAAAGAGATGTT	NA	False	NA	NA	False	NA	NA	NA	107482487	107482293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_107482300_107482500
ES.22361.1	chr3	+	1794	4	FSM	ENSMUSG00000014603.4	ENSMUST00000014747.3	1874	4	81	-1	81	1	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGATCCCCAGACCC	NA	False	NA	NA	False	AATAAA	-26	NA	107502427	107513093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_107502769_107507769_107508087_107511586_107511716_107512086
ES.22362.1	chr3	-	3222	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	-6	-1	-6	1	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCCTTGTGTGTAGAT	NA	False	NA	0	True	ATTAAA	-18	NA	107539016	107519846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.10	chr3	-	5048	18	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	175	junction_2	23.9920690471378	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539001	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.11	chr3	-	2456	16	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	58.7947843491807	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539008	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527565_107534077_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.12	chr3	-	8419	14	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	4	0	intron_retention	FALSE	canonical	3	175	junction_2	28.7860913160234	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539006	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107527420_107527524_107527591_107528642_107532048_107532996_107534779_107535471_107535542_107538816
ES.22362.13	chr3	-	4404	19	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	175	junction_4	23.132802320728	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539004	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522736_107523076_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.15	chr3	-	3144	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	52.4607754802473	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539014	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107535471_107535542_107538816
ES.22362.16	chr3	-	4325	19	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	5	0	intron_retention	TRUE	canonical	2	4	junction_14	53.4028771130415	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539005	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534098_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.18	chr3	-	3300	20	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-5	0	intron_retention	FALSE	canonical	2	3	junction_6	52.1983220031506	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539015	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524247_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.2	chr3	-	4495	19	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	175	junction_2	24.3733815543732	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539014	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107529371_107531702_107531831_107531940_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.20	chr3	-	3134	20	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	68.8996620811964	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539001	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524247_107525373_107525472_107525631_107525707_107526226_107526299_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.23	chr3	-	3215	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	50.975754040524	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539020	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524247_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.24	chr3	-	3201	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	51.807238876435	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539004	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533060_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.25	chr3	-	3234	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.6177295122519	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539007	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527444_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.26	chr3	-	5273	17	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-15	1	intron_retention	FALSE	canonical	3	175	junction_2	24.6928000639863	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539025	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107524255_107525373_107525472_107525631_107525707_107526226_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.27	chr3	-	3171	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	51.0332244719065	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539015	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534098_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.28	chr3	-	3157	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-16	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	52.5926171577474	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539026	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.29	chr3	-	4373	19	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	2	1	intron_retention	FALSE	canonical	3	175	junction_2	23.5141144899593	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539008	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.3	chr3	-	6405	16	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	175	junction_2	24.4743857033339	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539015	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523925_107524127_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107529371_107531702_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.30	chr3	-	4252	20	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_10	52.9003662885485	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539010	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528722_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.31	chr3	-	3249	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-15	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	51.565492337415	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539025	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522137_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.32	chr3	-	3334	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	-16	1	intron_retention	FALSE	canonical	3	175	junction_2	22.8871735843778	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTGCCTTGTGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	107539026	107519849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.35	chr3	-	3117	21	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	67.494647935966	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCGTGTTGCCTTGTGTG	NA	False	NA	-5	True	ATTAAA	-13	NA	107539004	107519851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524247_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528722_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.37	chr3	-	5205	18	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	8	-1	intron_retention	FALSE	canonical	3	175	junction_2	23.7654338851801	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCGTGTTGCCTTGTGTG	NA	False	NA	-5	True	ATTAAA	-13	NA	107539002	107519851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.38	chr3	-	3987	19	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	9	-1	intron_retention	FALSE	canonical	3	175	junction_2	23.3161974114219	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCGTGTTGCCTTGTGTG	NA	False	NA	-5	True	ATTAAA	-13	NA	107539001	107519851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.40	chr3	-	3886	20	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	3	-16	intron_retention	FALSE	canonical	3	175	junction_2	24.0382889403563	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGCAAAACTGTCC	NA	False	NA	-20	True	NA	NA	NA	107539007	107519866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107535542_107538816
ES.22362.41	chr3	-	3866	20	NNC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	2	-16	intron_retention	FALSE	canonical	2	3	junction_5	52.2975717512805	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGCAAAACTGTCC	NA	False	NA	-20	True	NA	NA	NA	107539008	107519866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523925_107524127_107524247_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.6	chr3	-	5356	18	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	7	0	intron_retention	FALSE	canonical	3	175	junction_2	24.1805492480571	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539003	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.7	chr3	-	3175	21	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	51.0788361261296	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539010	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521950_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ES.22362.8	chr3	-	5232	18	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	175	junction_2	25.0915279544014	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539004	107519847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107534396_107534703_107534779_107535471_107535542_107538816
ES.22363.1	chr3	-	4465	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	15	-617	15	615	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAAGTTCTTGCCTTGC	NA	False	NA	NA	False	AAAAAG	-17	NA	107603861	107569818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.12	chr3	-	3730	16	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	24	-2	intron_retention	FALSE	canonical	1	18	junction_10	193.678725958451	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTAGTCGTGTGTCT	NA	False	NA	-6	True	ATTAAA	-21	NA	107603852	107570437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.13	chr3	-	3826	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	192.72348026058	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTAGTAGTCGTGTGTCT	NA	False	NA	-6	True	ATTAAA	-21	NA	107603817	107570437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572977_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.15	chr3	-	7941	8	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	750	junction_1	44.8544130197569	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTAGTCGTGTGTC	NA	False	NA	-7	True	ATTAAA	-20	NA	107603847	107570438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.16	chr3	-	6170	13	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	19	-3	intron_retention	FALSE	canonical	3	702	junction_5	36.6306641429767	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTAGTCGTGTGTC	NA	False	NA	-7	True	ATTAAA	-20	NA	107603857	107570438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.17	chr3	-	5722	15	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	702	junction_3	44.6201656616542	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTAGTCGTGTGTC	NA	False	NA	-7	True	ATTAAA	-20	NA	107603875	107570438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107574537_107574955_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.19	chr3	-	3746	18	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	20	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	187.153767987643	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTAGTCGTGTGTC	NA	False	NA	-7	True	ATTAAA	-20	NA	107603856	107570438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107571277_107571370_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.2	chr3	-	3944	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	-74	-7	-74	5	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGTCTTTTTTGGTT	NA	False	NA	3	True	ATTAAA	-30	NA	107603950	107570428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.20	chr3	-	3638	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	172	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	192.849996354032	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTAGTAGTCGTGTGT	NA	False	NA	-8	True	ATTAAA	-19	NA	107603649	107570439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572825_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.22	chr3	-	3601	18	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	131	-4	intron_retention	FALSE	non_canonical	0	0	junction_17	187.153767987643	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTAGTAGTCGTGTGT	NA	False	NA	-8	True	ATTAAA	-19	NA	107603690	107570439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473_107603562_107603633
ES.22363.23	chr3	-	3979	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	23	-5	intron_retention	FALSE	canonical	0	0	junction_13	192.606423503994	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTAGTAGTCGTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	107603853	107570440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581179_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.24	chr3	-	7130	10	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	114	-7	intron_retention	FALSE	canonical	3	750	junction_1	41.0179123774293	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107603707	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107577272_107577519_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.25	chr3	-	4434	5	NIC	ENSMUSG00000027893.15	novel	1689	10	NA	NA	366	-7	intron_retention	FALSE	canonical	3	750	junction_1	27.6348964173923	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107577524	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575661_107575982
ES.22363.26	chr3	-	5212	15	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	15	-7	intron_retention	FALSE	canonical	3	702	junction_5	35.1115569089642	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107603861	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.27	chr3	-	3807	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-15	-7	intron_retention	FALSE	canonical	1	2	junction_16	192.355790139003	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107603836	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585139_107603473
ES.22363.28	chr3	-	3882	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	7	-7	intron_retention	FALSE	canonical	0	0	junction_8	192.785978727059	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107603869	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576531_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.29	chr3	-	3792	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-16	-7	intron_retention	FALSE	canonical	2	31	junction_14	181.812048813466	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTAGTAGTCGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	107603837	107570442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581400_107582326_107582471_107585035_107585148_107603473
ES.22363.3	chr3	-	8962	9	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-1595	2	intron_retention	FALSE	canonical	3	702	junction_3	52.882978121509	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGTGTGTCTTTTTTG	NA	False	NA	0	True	ATTAAA	-27	NA	107586678	107570431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107574537_107574955_107575482_107575565_107577637_107578453_107578561_107579357_107579453_107580751_107581425_107582326_107582471_107585035
ES.22363.30	chr3	-	4598	15	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	160	-8	intron_retention	FALSE	canonical	3	702	junction_5	44.0064930274094	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACATTTAGTAGTCGT	NA	False	NA	-12	True	ATTAAA	-15	NA	107603661	107570443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.33	chr3	-	7724	10	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	134	-9	intron_retention	FALSE	canonical	3	725	junction_2	33.053641401161	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGACATTTAGTAGTCG	NA	False	NA	-13	True	ATTAAA	-14	NA	107603687	107570444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.34	chr3	-	4692	16	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-161	-10	intron_retention	FALSE	canonical	3	26	junction_15	188.837661027196	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAGACATTTAGTAGTC	NA	False	NA	-14	True	ATTAAA	-13	NA	107603440	107570445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107582471_107585035_107585148_107603100
ES.22363.35	chr3	-	4605	16	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	90	-15	intron_retention	FALSE	canonical	3	702	junction_5	33.9322200210295	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603731	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107582471_107585035_107585148_107603473
ES.22363.38	chr3	-	4270	17	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-49	-15	intron_retention	FALSE	canonical	3	26	junction_16	186.686903664933	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603925	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603100
ES.22363.39	chr3	-	6229	12	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-23	-15	intron_retention	FALSE	canonical	3	725	junction_6	32.1553563523834	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603844	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575661_107575982_107576054_107576408_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.4	chr3	-	5720	14	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	7	2	intron_retention	FALSE	canonical	3	702	junction_5	35.2205225273645	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGTGTGTCTTTTTTG	NA	False	NA	0	True	ATTAAA	-27	NA	107603869	107570431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107582471_107585035_107585148_107603473
ES.22363.40	chr3	-	3664	16	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-3	-15	intron_retention	FALSE	canonical	1	18	junction_10	254.856683037524	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603824	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107579357_107579453_107580751_107580855_107581323_107581400_107582326_107582471_107585035_107585148_107603473
ES.22363.41	chr3	-	3745	16	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	-16	-15	intron_retention	FALSE	canonical	1	4	junction_8	197.207797907577	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603837	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.43	chr3	-	6005	12	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	3	-15	intron_retention	FALSE	canonical	3	725	junction_4	32.5812398487633	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	False	NA	-19	True	ATTAAA	-8	NA	107603818	107570450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572953_107574457_107574537_107574955_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.45	chr3	-	3826	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	4	-18	intron_retention	FALSE	canonical	1	9	junction_15	188.902494276148	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAAATGATAAGACATT	NA	False	NA	-22	True	ATTAAA	-5	NA	107603872	107570453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582456_107585035_107585148_107603473
ES.22363.48	chr3	-	3035	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	14	814	14	19	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGACTTGGAGAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	107603862	107571249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.49	chr3	-	2496	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	10	1357	10	6	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTCCCTTAGCATTT	NA	False	NA	NA	False	ACTAAA	-19	NA	107603866	107571792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.50	chr3	-	2071	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	51	1741	-4	-378	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTTGATTCTTTAACC	NA	False	NA	NA	False	ACTAAA	-21	NA	107603825	107572176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.51	chr3	-	1983	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	-43	1923	-43	349	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTATTTTCTTCTTATT	NA	False	NA	NA	False	AATAGA	-16	NA	107603919	107572358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.6	chr3	-	7570	12	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	225	-1	intron_retention	FALSE	canonical	3	702	junction_3	38.8419131207003	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTAGTCGTGTGTCTT	NA	False	NA	-5	True	ATTAAA	-22	NA	107603596	107570436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107582471_107585035_107585148_107603473
ES.22363.8	chr3	-	3798	17	NNC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	24	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	260.522761721505	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTAGTCGTGTGTCTT	NA	False	NA	-5	True	ATTAAA	-22	NA	107603852	107570436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107572430_107572831_107572949_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580819_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ES.22363.9	chr3	-	4626	12	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	3415	-1	intron_retention	FALSE	canonical	3	702	junction_5	33.6248137418418	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTAGTCGTGTGTCTT	NA	False	NA	-5	True	ATTAAA	-22	NA	107581668	107570436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751
ES.22364.2	chr3	-	3999	9	FSM	ENSMUSG00000014599.11	ENSMUST00000014743.10	4176	9	167	10	-60	-10	multi-exon	FALSE	canonical	0	0	junction_7	1.36358901432946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTGAGTCATGGGAA	6572	False	NA	NA	False	AATAAA	-17	NA	107667618	107648373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469_107656486_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ES.22364.3	chr3	-	3875	9	FSM	ENSMUSG00000014599.11	ENSMUST00000014743.10	4176	9	26	275	26	-275	multi-exon	FALSE	canonical	0	0	junction_7	1.36358901432946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCCATTGCAAGAAGCT	6431	False	NA	NA	False	ATTAAA	-16	NA	107667759	107648638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469_107656486_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ES.22365.1	chr3	+	178	1	Intergenic	novelGene_18425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	107721505	107721683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107721500_107721700
ES.22366.1	chr3	+	178	1	Intergenic	novelGene_18426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAAGAC	NA	False	NA	NA	False	NA	NA	NA	107778430	107778608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107778400_107778600
ES.22367.1	chr3	-	5002	3	FSM	ENSMUSG00000086968.9	ENSMUST00000131345.8	5407	3	405	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTGCATCTGTTT	NA	False	NA	NA	False	NA	NA	NA	107803124	107796165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107800824_107801366_107801545_107802958
ES.22367.2	chr3	-	5112	4	FSM	ENSMUSG00000086968.9	ENSMUST00000137800.8	861	4	21	-4272	1	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCTGTGTGCATCTGT	NA	False	NA	NA	False	NA	NA	NA	107803104	107796167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107800824_107801366_107801545_107802176_107802309_107802958
ES.22368.1	chr3	+	927	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	16	2	1	-2	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTCTAGATGGATT	NA	False	NA	9	True	AATAAA	-14	NA	107803152	107806000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ES.22368.2	chr3	+	1010	7	NNC	ENSMUSG00000004032.11	novel	658	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_4	19.3706536343568	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTCTAGATGGATT	NA	False	NA	9	True	AATAAA	-14	NA	107803241	107806000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804684_107804777_107804879_107805282_107805379_107805481
ES.22369.1	chr3	-	862	3	ISM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	2648	3	2410	-3	3prime_fragment	FALSE	canonical	3	10	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATTGTTTTTCTTTGGT	NA	False	NA	-10	True	NA	NA	NA	107836485	107833652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_107834297_107836185_107836297_107836378
ES.2237.1	chr1	-	238	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATCTTCCTCAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	194366962	194366724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_194366700_194367000
ES.22370.1	chr3	+	735	1	Intergenic	novelGene_18427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGATGGAGCCATTTT	9658	False	NA	NA	False	NA	NA	NA	107862802	107863537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107862800_107863500
ES.22370.2	chr3	+	4102	1	Intergenic	novelGene_18428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGTTGTGAAAAATGGA	9660	False	NA	NA	False	NA	NA	NA	107862804	107866906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107862800_107866900
ES.22371.1	chr3	-	2123	7	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1179	8	NA	NA	-344	0	intron_retention	FALSE	canonical	3	14	junction_5	13.1074618273545	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGTCCTGTCGTAT	7893	False	NA	-2	True	AGTAAA	-15	NA	107860781	107846163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107846633_107848308_107848420_107848504_107849731_107850017_107850083_107850560_107850637_107860362_107860439_107860681
ES.22371.10	chr3	-	1266	1	NIC	ENSMUSG00000089664.3	novel	521	6	NA	NA	53	-1008	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTTGGTATTGTTGTG	8290	False	NA	NA	False	AATAAA	-21	NA	107860384	107859118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107859100_107860400
ES.22371.2	chr3	-	2521	5	NNC	ENSMUSG00000068762.12	novel	1179	8	NA	NA	-12383	0	intron_retention	FALSE	non_canonical	0	0	junction_3	21.6159663212173	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGTCCTGTCGTAT	5226	False	NA	-2	True	AGTAAA	-15	NA	107863448	107846163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107846633_107848308_107848420_107848504_107850083_107850524_107850637_107863197
ES.22371.3	chr3	-	1151	9	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-319	0	multi-exon	FALSE	canonical	3	14	junction_7	13.2452821789496	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGTCCTGTCGTAT	7918	False	NA	-2	True	AGTAAA	-15	NA	107860756	107846163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107860362_107860439_107860681
ES.22371.4	chr3	-	1133	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	19	1	4	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGTCCTGTCGTAT	1809	False	NA	-2	True	AGTAAA	-15	NA	107851046	107846163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
ES.22371.5	chr3	-	1080	8	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1153	8	NA	NA	-349	0	multi-exon	FALSE	canonical	2	3	junction_3	16.3157617545934	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGTCCTGTCGTAT	7888	False	NA	-2	True	AGTAAA	-15	NA	107860786	107846163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107846633_107848308_107848420_107848504_107848601_107849648_107849731_107850017_107850083_107850560_107850637_107860362_107860439_107860681
ES.22371.6	chr3	-	2515	7	Fusion	ENSMUSG00000068762.12_ENSMUSG00000089664.3	novel	1179	8	NA	NA	-339	-1	intron_retention	FALSE	canonical	2	6	junction_5	16.9648329067974	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGTCCTGTCGTA	7898	False	NA	-3	True	AGTAAA	-14	NA	107860776	107846164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107846633_107848308_107848420_107848504_107850083_107850560_107850637_107858112_107858224_107860362_107860439_107860681
ES.22371.7	chr3	-	1114	8	NNC	ENSMUSG00000068762.12	novel	1153	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.4378855584486	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGTCCTGTCGTA	1807	False	NA	-3	True	AGTAAA	-14	NA	107851048	107846164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850933
ES.22371.8	chr3	-	2889	2	ISM	ENSMUSG00000068762.12	ENSMUST00000106681.3	623	6	1591	-2145	1540	-1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGTCCTGTCGTA	3717	False	NA	-3	True	AGTAAA	-14	NA	107849138	107846164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_107848420_107848504
ES.22371.9	chr3	-	4473	2	NNC	ENSMUSG00000089664.3	novel	521	6	NA	NA	-355	2034	intron_retention	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATGTATCAATTCCT	7882	False	NA	NA	False	NA	NA	NA	107860792	107856076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107860439_107860681
ES.22372.1	chr3	+	208	1	Intergenic	novelGene_18429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	4844	False	NA	NA	False	AAAAAG	-10	NA	107902142	107902350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107902100_107902400
ES.22372.2	chr3	+	174	2	Intergenic	novelGene_18430	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACACACACACACG	4846	False	NA	NA	False	NA	NA	NA	107902144	107975593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_107902180_107975454
ES.22373.10	chr3	-	1131	7	NNC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	213	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	113.881029539115	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	NA	False	NA	-7	True	AATAAA	-41	NA	107876386	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876298
ES.22373.12	chr3	-	1184	9	Fusion	ENSMUSG00000004038.10_ENSMUSG00000058135.13	novel	1311	8	NA	NA	7	-7	multi-exon	TRUE	canonical	0	0	junction_8	87.243552770391	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	6757	False	NA	-7	True	AATAAA	-41	NA	107925115	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420_107876461_107925096
ES.22373.13	chr3	-	2385	8	Fusion	ENSMUSG00000004038.10_ENSMUSG00000058135.13	novel	1311	8	NA	NA	7	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	92.8896646345457	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	6757	False	NA	-7	True	AATAAA	-41	NA	107925115	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107871613_107873402_107873514_107873594_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420_107876461_107925095
ES.22373.14	chr3	-	1102	8	Fusion	ENSMUSG00000004038.10_ENSMUSG00000058135.13	novel	1311	8	NA	NA	7	-8	multi-exon	FALSE	non_canonical	0	0	junction_7	108.327357239668	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGAGTTGTGTCTTTT	6757	False	NA	-8	True	AATAAA	-40	NA	107925115	107871019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420_107876461_107925095
ES.22373.15	chr3	-	3671	3	Fusion	ENSMUSG00000004038.10_ENSMUSG00000058135.13	novel	1311	8	NA	NA	7	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	143	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGAGTTGTGTCTTTT	6757	False	NA	-8	True	AATAAA	-40	NA	107925115	107871019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107871613_107873402_107876461_107925095
ES.22373.18	chr3	-	1083	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	-16	-3	-16	3	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTATTATTTTTCT	2026	False	NA	-1	True	AATAAA	-16	NA	107893785	107889014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ES.22373.2	chr3	-	1049	6	NNC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	447	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.737114179106	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTCTTTTTCTTTTG	NA	False	NA	-1	True	AATAAA	-19	NA	107876152	107871012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107871613_107873402_107873514_107873594_107873691_107875060_107875164_107875451_107875517_107876078
ES.22373.20	chr3	-	1421	7	NIC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	637	junction_1	38.7298334620742	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGTGTATTATTT	2035	False	NA	-5	True	AATAAA	-12	NA	107893776	107889018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107893426_107893673
ES.22373.23	chr3	-	1004	8	NNC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	238.115818158187	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGTGTATTATTT	2080	False	NA	-5	True	AATAAA	-12	NA	107893731	107889018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892385_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ES.22373.25	chr3	-	4389	3	NIC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	715	junction_2	16	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGTGTATTATTT	2074	False	NA	-5	True	AATAAA	-12	NA	107893737	107889018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107891363_107891444_107893426_107893673
ES.22373.26	chr3	-	1505	7	NNC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_3	257.428145314377	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGTGTATTATTT	2052	False	NA	-5	True	AATAAA	-12	NA	107893759	107889018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107889455_107891251_107891363_107891444_107891642_107892364_107892466_107892562_107892645_107892933_107893426_107893673
ES.22373.27	chr3	-	993	8	NNC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	235.218265985151	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCAGTGTATTATTT	2075	False	NA	-5	True	AATAAA	-12	NA	107893736	107889018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893389_107893673
ES.22373.28	chr3	-	3172	6	NIC	ENSMUSG00000040562.13	novel	1064	8	NA	NA	1	-7	intron_retention	FALSE	canonical	3	655	junction_3	37.1030996009767	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACATTTGTTCAGTGTA	2075	False	NA	-11	True	AATAAA	-6	NA	107893736	107889024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107893426_107893673
ES.22373.30	chr3	-	1413	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	-124	0	-124	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6459	False	NA	-4	True	AATAAA	-18	NA	107925413	107919570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ES.22373.31	chr3	-	1811	6	NIC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	592	junction_3	65.6944442095372	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6746	False	NA	-4	True	AATAAA	-18	NA	107925126	107919570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107924743_107925055
ES.22373.32	chr3	-	1428	8	NNC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	235.994465517948	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGAGTTGTGTCTTTTTC	6737	False	NA	-5	True	AATAAA	-17	NA	107925135	107919571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107920095_107922068_107922180_107922260_107922651_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ES.22373.33	chr3	-	1203	8	FSM	ENSMUSG00000058135.13	ENSMUST00000126593.3	828	8	-5	-370	-5	-2	multi-exon	FALSE	canonical	2	4	junction_3	234.969559470054	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTTGTGTCTTTTT	6745	False	NA	-6	True	AATAAA	-16	NA	107925127	107919572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107920095_107922068_107922180_107922260_107922435_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ES.22373.34	chr3	-	1164	8	NNC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	-61	3	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_2	216.381182930796	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGAGTTGTGTCTTTT	6689	False	NA	-7	True	AATAAA	-15	NA	107925183	107919573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107920095_107922068_107922180_107922276_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ES.22373.35	chr3	-	1048	7	NIC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	252.87441986532	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGCCATGAGTTGTGT	6740	False	NA	-12	True	AATAAA	-10	NA	107925132	107919578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107925055
ES.22373.36	chr3	-	1214	6	NIC	ENSMUSG00000058135.13	novel	1289	8	NA	NA	290	-6	intron_retention	FALSE	canonical	3	592	junction_2	35.5268912234099	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTTGCCATGAGTT	7040	False	NA	-16	True	AATAAA	-6	NA	107924832	107919582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107920095_107922068_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666
ES.22373.4	chr3	-	2852	4	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	117	-1	intron_retention	FALSE	canonical	3	229	junction_2	26.8700576850888	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTCTTTTTCTTTTG	NA	False	NA	-1	True	AATAAA	-19	NA	107876482	107871012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107871613_107873402_107875517_107876078_107876155_107876420
ES.22373.5	chr3	-	1116	8	Fusion	ENSMUSG00000004038.10_ENSMUSG00000058135.13	novel	1311	8	NA	NA	7	-5	multi-exon	TRUE	non_canonical	0	0	junction_7	123.961646471473	373	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTTGTGTCTTTTTCT	6757	False	NA	-5	True	AATAAA	-43	NA	107925115	107871016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_107871613_107873402_107873514_107873594_107873691_107874879_107874992_107875451_107875517_107876078_107876155_107876420_107876461_107925095
ES.22373.7	chr3	-	1047	1	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	4534	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	NA	False	NA	-7	True	AATAAA	-41	NA	107872065	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107871000_107872100
ES.22373.8	chr3	-	1008	6	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	113	-7	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	88.3388929068052	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	NA	False	NA	-7	True	AATAAA	-41	NA	107876486	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107875451_107875517_107876078_107876155_107876420
ES.22373.9	chr3	-	1166	8	NNC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	122	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	83.2051803724764	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGAGTTGTGTCTTTTT	NA	False	NA	-7	True	AATAAA	-41	NA	107876477	107871018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107871613_107873402_107873514_107873610_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ES.22374.1	chr3	-	3074	8	NNC	ENSMUSG00000027890.18	novel	1707	8	NA	NA	21	1438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.2329948866726	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	107952154	107946285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107951952
ES.22374.10	chr3	-	3258	5	NIC	ENSMUSG00000027890.18	novel	1462	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	22	junction_4	41.0487515035476	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAGATGTCTTTTCC	NA	False	NA	-7	True	AATAAA	-17	NA	107952181	107947726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
ES.22374.2	chr3	-	1494	8	NNC	ENSMUSG00000027890.18	novel	777	8	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.5819659389298	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTTTTCCTACCATT	NA	False	NA	0	True	AATAAA	-24	NA	107952181	107947719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107952125
ES.22374.3	chr3	-	1729	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	-24	2	-24	0	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952234	107947725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
ES.22374.4	chr3	-	1689	8	NNC	ENSMUSG00000027890.18	novel	1462	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.1524077098312	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952173	107947725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668_107951745_107951916
ES.22374.5	chr3	-	1512	6	NNC	ENSMUSG00000027890.18	novel	1462	8	NA	NA	431	0	intron_retention	FALSE	canonical	0	0	junction_3	44.7946425368034	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107951744	107947725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107948642_107949451_107949739_107950639_107950741_107950850_107950918_107951210_107951276_107951668
ES.22374.6	chr3	-	1465	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	-3	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952178	107947725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
ES.22374.7	chr3	-	1503	8	FSM	ENSMUSG00000027890.18	ENSMUST00000106670.2	777	8	1	-727	1	0	multi-exon	FALSE	canonical	3	28	junction_7	31.2429583903252	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952181	107947725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952125
ES.22375.10	chr3	-	6937	5	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	249	junction_1	4.96865172858795	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993970	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983408_107983673_107986126_107986302_107988448_107993533
ES.22375.11	chr3	-	4220	15	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_9	63.2553942202496	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993978	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986122_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.13	chr3	-	3780	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	124	junction_17	34.3116189829602	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993988	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.14	chr3	-	3400	18	FSM	ENSMUSG00000027889.18	ENSMUST00000078912.7	3368	18	-7	-25	-7	0	multi-exon	FALSE	canonical	3	5	junction_17	58.315690197265	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107992722	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ES.22375.18	chr3	-	4208	16	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	198	junction_12	21.977159860991	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993967	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107988448_107993533
ES.22375.19	chr3	-	4156	11	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-55	0	intron_retention	FALSE	canonical	3	199	junction_5	22.3089668070935	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107987989	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987491_107987582_107987652_107987959
ES.22375.2	chr3	-	3751	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	-98	-3	-74	3	multi-exon	TRUE	canonical	3	198	junction_12	21.7907634157735	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGAAGGTGTCTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	107994041	107981374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.20	chr3	-	3253	18	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	387	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.7168636670444	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCATGTGAAGGTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	107993556	107981378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986634_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.21	chr3	-	3078	2	NIC	ENSMUSG00000027889.18	novel	537	3	NA	NA	489	-1	intron_retention	FALSE	canonical	3	253	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCATGTGAAGGTGTC	1715	False	NA	-7	True	AATAAA	-16	NA	107984722	107981378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107983408_107983673
ES.22375.22	chr3	-	4369	16	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-44	0	intron_retention	FALSE	canonical	3	124	junction_15	35.3682846001266	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107994011	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.23	chr3	-	2961	9	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	575	0	intron_retention	FALSE	canonical	3	199	junction_6	20.2295421352041	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	-13	True	NA	-8	True	AATAAA	-15	NA	107986450	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302
ES.22375.24	chr3	-	4544	15	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	7	0	intron_retention	FALSE	canonical	3	124	junction_14	34.5799871342382	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993960	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987491_107987582_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.26	chr3	-	4003	17	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-10	0	intron_retention	FALSE	canonical	3	124	junction_16	34.3709088474541	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993953	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.27	chr3	-	3978	17	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-5	0	intron_retention	FALSE	canonical	3	124	junction_16	33.9088852662543	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993972	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.28	chr3	-	3938	17	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-8	0	intron_retention	FALSE	canonical	3	124	junction_16	32.9691498790915	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993951	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.3	chr3	-	3752	18	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-43	2	intron_retention	FALSE	canonical	2	7	junction_2	58.3015665686597	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGTGAAGGTGTCTGT	NA	False	NA	-4	True	AATAAA	-19	NA	107994010	107981375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982813_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.30	chr3	-	4041	16	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	199	junction_8	18.7089996169401	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993968	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.32	chr3	-	6507	9	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-11	0	intron_retention	FALSE	canonical	3	199	junction_5	21.4763678260548	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993978	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983408_107983673_107983838_107983928_107984499_107984647_107984780_107984867_107986126_107986302_107986393_107986500_107988448_107993533
ES.22375.33	chr3	-	3794	17	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_4	60.1009567311536	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993981	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983404_107983669_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.35	chr3	-	3967	17	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-11	0	intron_retention	FALSE	canonical	3	198	junction_12	22.0538226561746	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993954	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107988091_107988316_107988448_107993533
ES.22375.36	chr3	-	4805	13	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-14	0	intron_retention	FALSE	canonical	3	199	junction_6	21.8568575559759	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993981	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987491_107987582_107988091_107988316_107988448_107993533
ES.22375.37	chr3	-	3879	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-33	0	intron_retention	FALSE	canonical	3	124	junction_17	33.4984377056561	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107994000	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.38	chr3	-	3865	15	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	11	0	intron_retention	FALSE	canonical	2	3	junction_6	63.5921314603738	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993956	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.39	chr3	-	4868	13	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-11	0	intron_retention	FALSE	canonical	3	199	junction_6	21.3691106246584	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993954	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983408_107983673_107983838_107983928_107984056_107984334_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107988448_107993533
ES.22375.4	chr3	-	3628	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	-38	-4	-38	2	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGTGAAGGTGTCTGT	NA	False	NA	-4	True	AATAAA	-19	NA	107994005	107981375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.40	chr3	-	4926	13	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	199	junction_7	21.0904138308274	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993967	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987491_107987582_107988448_107993533
ES.22375.41	chr3	-	5436	13	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-25	0	intron_retention	FALSE	canonical	3	199	junction_6	20.2216880271323	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993992	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984780_107984867_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988448_107993533
ES.22375.42	chr3	-	3603	19	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	61.068697402754	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993951	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982813_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.43	chr3	-	3919	20	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_17	88.3743611056455	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993966	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107991544_107991664_107991896_107992026_107993533
ES.22375.45	chr3	-	4255	16	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-10	0	intron_retention	FALSE	canonical	3	198	junction_12	22.4019840391178	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993953	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987491_107987582_107988091_107988316_107988448_107993533
ES.22375.46	chr3	-	4539	12	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	18	0	intron_retention	FALSE	canonical	2	3	junction_5	70.1295141886109	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993925	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107988448_107993533
ES.22375.48	chr3	-	4284	15	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	125	0	intron_retention	FALSE	canonical	3	124	junction_14	34.9089193911989	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993818	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.49	chr3	-	3658	18	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_16	59.3764018228252	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993964	107981379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988080_107988316_107988448_107993533
ES.22375.5	chr3	-	4044	17	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	8	2	intron_retention	FALSE	canonical	3	124	junction_16	33.7767833541029	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGTGAAGGTGTCTGT	NA	False	NA	-4	True	AATAAA	-19	NA	107993935	107981375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988448_107993533_107993669_107993754
ES.22375.51	chr3	-	3835	18	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	11	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	64.1460811210115	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107993956	107981380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984866_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.53	chr3	-	3950	17	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	198	junction_11	22.3536035965121	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107993980	107981380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.54	chr3	-	4992	12	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	10	-1	intron_retention	FALSE	canonical	3	208	junction_5	19.2229202036794	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107993957	107981380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983408_107983673_107983838_107983928_107985063_107985995_107986126_107986302_107986393_107986500_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.56	chr3	-	4125	15	FSM	ENSMUSG00000027889.18	ENSMUST00000136712.8	4288	15	160	3	0	-1	multi-exon	FALSE	canonical	3	5	junction_14	63.61539410667	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107992711	107981380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107988091_107988316_107988448_107992562
ES.22375.57	chr3	-	4910	12	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	199	junction_7	20.272931103745	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGGCATGTGAAGGTG	NA	False	NA	-9	True	AATAAA	-14	NA	107993978	107981380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107988091_107988316_107988448_107993533
ES.22375.58	chr3	-	3723	16	NIC	ENSMUSG00000027889.18	novel	3368	18	NA	NA	30	-2	intron_retention	FALSE	canonical	3	5	junction_15	60.3425775606799	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGGCATGTGAAGGT	NA	False	NA	-10	True	AATAAA	-13	NA	107992681	107981381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ES.22375.59	chr3	-	3666	18	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	78.6148686817874	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGGCATGTGAAGGT	NA	False	NA	-10	True	AATAAA	-13	NA	107993972	107981381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984866_107985063_107985995_107986126_107986302_107986383_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.60	chr3	-	3524	19	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	57.9580520934679	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGGCATGTGAAGGT	NA	False	NA	-10	True	AATAAA	-13	NA	107993967	107981381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993609_107993754
ES.22375.61	chr3	-	1959	8	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	0	39	intron_retention	FALSE	canonical	3	124	junction_7	45.8622605066029	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTGTGACTGTGGA	NA	False	NA	NA	False	AATAAA	-36	NA	107993967	107985744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107986126_107986302_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.62	chr3	-	1592	10	ISM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	-32	4396	-32	8	5prime_fragment	FALSE	canonical	3	124	junction_9	44.2065857336011	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAATAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	107993999	107985775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ES.22375.64	chr3	-	1930	8	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-24	8	intron_retention	FALSE	canonical	3	221	junction_5	17.9284291400159	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAATAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	107993991	107985775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ES.22375.7	chr3	-	3110	16	NIC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-494	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	61.0829672567475	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107988428	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316
ES.22375.8	chr3	-	3561	19	NNC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	61.9307907224361	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993951	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988080_107988316_107988448_107993533_107993669_107993754
ES.22375.9	chr3	-	5457	11	NNC	ENSMUSG00000027889.18	novel	3650	18	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_3	74.6273408343082	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993977	107981377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_107982438_107982564_107982676_107982846_107983404_107983673_107983838_107983928_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987491_107987582_107988448_107993533
ES.22376.1	chr3	+	165	1	Intergenic	novelGene_18431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAGAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	108029145	108029310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108029100_108029300
ES.22377.1	chr3	-	4510	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	35	-1283	35	1283	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCAGAGTGGTCAAGGT	NA	False	NA	NA	False	AATAAA	-31	NA	108053427	108013312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.10	chr3	-	3188	9	NNC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	44	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	198.021739652494	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTTGTCTCTGCAC	NA	False	NA	-29	True	ATTAAA	-13	NA	108053418	108014614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019914_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053209
ES.22377.13	chr3	-	3156	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	10	96	10	-96	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAATGCATTTTGTAT	NA	False	NA	7	True	NA	NA	NA	108053452	108014691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.14	chr3	-	3187	8	NIC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	35	-126	intron_retention	FALSE	canonical	3	376	junction_3	44.9571224295201	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATTAGATAATCCAAA	NA	False	NA	-23	True	NA	NA	NA	108053427	108014721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.15	chr3	-	2361	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	35	866	35	-866	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTAGTTCTTTCTGGG	NA	False	NA	NA	False	ATTAAA	-37	NA	108053427	108015461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.16	chr3	-	1761	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	21	1480	21	-1480	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATTTATGTTACTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	108053441	108016075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.17	chr3	-	2154	5	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	18	7042	18	-7042	5prime_fragment	FALSE	canonical	3	407	junction_2	40.1022131558845	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAATTCAGTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	108053444	108021637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.18	chr3	-	3975	1	NIC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	27817	-7075	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108025645	108021670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108021700_108025600
ES.22377.19	chr3	-	4426	1	Intergenic	novelGene_18432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7012	False	NA	NA	False	NA	NA	NA	108037829	108033403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108033400_108037800
ES.22377.2	chr3	-	3424	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	-157	-5	-157	5	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATTTGTCTTGTTTTT	NA	False	NA	-5	True	ATTAAA	-37	NA	108053619	108014590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ES.22377.3	chr3	-	4602	2	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	34178	1	34178	-1	intron_retention	FALSE	canonical	3	441	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACTTTTATTTGTCTT	NA	False	NA	-11	True	ATTAAA	-31	NA	108019284	108014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108016633_108016718
ES.22377.4	chr3	-	2926	7	NIC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	47	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	169.500655521512	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCACTTTTATTTGTCT	NA	False	NA	-12	True	ATTAAA	-30	NA	108053415	108014597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108030857_108031000_108031110_108031154_108053203
ES.22377.5	chr3	-	3120	9	NNC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	324	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	151.378199801028	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCACTTTTATTTGTC	NA	False	NA	-13	True	ATTAAA	-29	NA	108053138	108014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053018
ES.22377.7	chr3	-	2892	8	NNC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	22570	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	199.421612649775	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTCTCTGCACACCA	NA	False	NA	-25	True	ATTAAA	-17	NA	108030892	108014610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108029773_108029828_108030857
ES.22377.8	chr3	-	3088	8	NIC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	156.932846680824	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGTCTCTGCACACC	NA	False	NA	-26	True	ATTAAA	-16	NA	108053462	108014611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108030857_108031000_108031110_108031154_108053203
ES.22377.9	chr3	-	2655	5	NIC	ENSMUSG00000000001.5	novel	3262	9	NA	NA	19	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	199.650319308535	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTCTCTGCACAC	NA	False	NA	-27	True	ATTAAA	-15	NA	108053443	108014612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108016633_108016718_108016929_108030857_108031000_108031110_108031154_108053203
ES.22378.1	chr3	-	177	1	Intergenic	novelGene_18433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTTGCTGTGGTC	880	False	NA	NA	False	NA	NA	NA	108085768	108085591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108085600_108085800
ES.22379.1	chr3	+	3676	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-47	1401	-47	-1392	multi-exon	FALSE	canonical	3	5	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAGGCTGCTGTCCAT	489	False	NA	NA	False	AGTAAA	-23	NA	108093603	108097691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108093995_108094406
ES.22379.2	chr3	+	2700	1	Genic_Genomic	ENSMUSG00000050947.10	novel	NA	NA	NA	NA	-29	-2762	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTTTTTTTTCTGTC	507	False	NA	NA	False	NA	NA	NA	108093621	108096321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_108093600_108096300
ES.22379.3	chr3	+	5024	2	FSM	ENSMUSG00000050947.10	ENSMUST00000106656.2	5482	2	-50	508	-27	1	multi-exon	FALSE	canonical	2	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGGTTGGTTTATTT	509	False	NA	20	True	ATTAAA	-27	NA	108093623	108099094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108093995_108094441
ES.22379.4	chr3	+	5053	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-21	-2	-21	1	multi-exon	FALSE	canonical	3	5	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGGTTGGTTTATTT	515	False	NA	20	True	ATTAAA	-27	NA	108093629	108099094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108093995_108094406
ES.22379.5	chr3	+	2266	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	-12	2776	-12	-2767	multi-exon	FALSE	canonical	3	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAATGTTTTTTTTTT	524	False	NA	NA	False	NA	NA	NA	108093638	108096316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108093995_108094406
ES.22379.6	chr3	+	5444	1	Genic_Genomic	ENSMUSG00000050947.10	novel	NA	NA	NA	NA	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTTGTGGTTGGTTTA	533	False	NA	17	True	ATTAAA	-24	NA	108093647	108099091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_108093600_108099100
ES.22379.7	chr3	+	2009	3	NIC	ENSMUSG00000050947.10	novel	1360	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	4	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTGTGGTTGGTTTAT	552	False	NA	18	True	ATTAAA	-25	NA	108093666	108099092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108093995_108094441_108096020_108098989
ES.2238.1	chr1	-	175	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGCATTGTGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	194503865	194503690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_194503700_194503900
ES.22380.1	chr3	-	4126	3	NNC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	157	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTATGCTCTGTCCTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	108107754	108103088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108107032_108107440_108107479_108107609
ES.22380.10	chr3	-	1535	3	NNC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	165	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGACTCTCTCCCTGT	NA	False	NA	NA	False	AATAAA	-28	NA	108107746	108105592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108107032_108107440_108107479_108107688
ES.22380.2	chr3	-	4631	1	NIC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	191	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTATGCTCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-13	NA	108107720	108103089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108103100_108107700
ES.22380.3	chr3	-	4223	3	FSM	ENSMUSG00000048796.8	ENSMUST00000106655.2	4275	3	-35	87	-35	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTATGCTCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-13	NA	108108185	108103089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108107032_108107440_108107479_108107942
ES.22380.4	chr3	-	4004	2	NNC	ENSMUSG00000048796.8	novel	1914	2	NA	NA	161	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTATGCTCTGTCCTT	NA	False	NA	-3	True	ATTAAA	-13	NA	108107750	108103089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108107032_108107688
ES.22380.5	chr3	-	4081	3	FSM	ENSMUSG00000048796.8	ENSMUST00000065664.7	4058	3	-28	5	-28	-5	multi-exon	FALSE	canonical	1	2	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGCTATGCTCTGTCC	NA	False	NA	-5	True	ATTAAA	-11	NA	108108178	108103091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108107032_108107440_108107479_108108075
ES.22380.7	chr3	-	4022	3	NNC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	176	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGATGCTATGCTCTG	NA	False	NA	-8	True	ATTAAA	-8	NA	108107735	108103094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108107032_108107440_108107479_108107688
ES.22380.8	chr3	-	1817	3	NNC	ENSMUSG00000048796.8	novel	4275	3	NA	NA	137	250	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCAGGGAAGGTATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	108107774	108105338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108107032_108107440_108107479_108107688
ES.22380.9	chr3	-	1689	3	FSM	ENSMUSG00000048796.8	ENSMUST00000106655.2	4275	3	0	2586	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTCTCTCCCTGTTGCC	NA	False	NA	NA	False	AATAAA	-32	NA	108108150	108105588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108107032_108107440_108107479_108107942
ES.22381.1	chr3	-	2508	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-117	-4	-93	-2	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTCTCCCTGTTCTG	3289	False	NA	NA	False	AAGAAA	-26	NA	108117895	108109539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
ES.22381.2	chr3	-	4255	10	ISM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	-25	-4	-1	-2	intron_retention	FALSE	canonical	3	27	junction_7	6.65183535426478	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTCTCCCTGTTCTG	3381	False	NA	NA	False	AAGAAA	-26	NA	108117803	108109539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755
ES.22381.3	chr3	-	3247	9	NIC	ENSMUSG00000048997.18	novel	2387	11	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	28	junction_8	6.61437827766148	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTCTCCCTGTTCTG	3348	False	NA	NA	False	AAGAAA	-26	NA	108117836	108109539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108114921_108115278_108115384_108115755_108115822_108117660
ES.22381.4	chr3	-	2578	12	NNC	ENSMUSG00000048997.18	novel	3044	12	NA	NA	-42	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.1935606016304	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACTCTT	3340	False	NA	NA	False	NA	NA	NA	108117844	108109570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116259_108116412_108117660
ES.22381.5	chr3	-	2321	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117409.8	2321	11	-33	33	-33	-15	multi-exon	FALSE	canonical	2	3	junction_7	12.8124939024376	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACTCTT	3349	False	NA	NA	False	NA	NA	NA	108117835	108109570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114330_108114709_108114921_108115278_108115384_108115755_108115822_108117660
ES.22381.6	chr3	-	2666	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	345	33	-103	-15	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACTCTT	3279	False	NA	NA	False	NA	NA	NA	108117905	108109570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
ES.22381.7	chr3	-	3793	11	ISM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	467	33	-1	-15	intron_retention	FALSE	canonical	3	11	junction_10	10.8558739860041	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACTCTT	3401	False	NA	NA	False	NA	NA	NA	108117783	108109570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232
ES.22382.1	chr3	+	4891	1	Antisense	novelGene_ENSMUSG00000027887.12_AS_novelGene_ENSMUSG00000048997.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATACATAAATTTA	NA	False	NA	NA	False	NA	NA	NA	108117963	108122854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108118000_108122900
ES.22383.1	chr3	-	3270	6	FSM	ENSMUSG00000027887.12	ENSMUST00000141387.4	4090	6	25	795	20	-795	multi-exon	FALSE	canonical	0	0	junction_4	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACCAGAGGACTTCTGG	751	False	NA	NA	False	AATAAA	-31	NA	108133939	108119582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108121999_108123892_108124085_108124903_108125106_108126356_108126482_108133438_108133514_108133679
ES.22383.2	chr3	-	970	4	FSM	ENSMUSG00000027887.12	ENSMUST00000156371.3	969	4	-2	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATACTTGTGTTCCTG	729	False	NA	NA	False	NA	NA	NA	108133961	108124617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108125106_108126356_108126482_108133438_108133514_108133679
ES.22384.1	chr3	+	4214	2	ISM	ENSMUSG00000105961.2	ENSMUST00000198175.2	1027	3	9042	-417	9042	417	3prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108143144	108147980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108146078_108146699
ES.22384.2	chr3	+	2868	4	NNC	ENSMUSG00000105961.2	novel	1027	3	NA	NA	9078	6610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.942809041582063	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTTTTTTTTTAAAT	NA	False	NA	NA	False	AATAAA	-29	NA	108143180	108154173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108143301_108145985_108146078_108146699_108149297_108154114
ES.22384.3	chr3	+	1570	4	NNC	ENSMUSG00000105961.2	novel	1027	3	NA	NA	9080	417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108143182	108147980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108143301_108145786_108145866_108145985_108146078_108146699
ES.22384.4	chr3	+	2746	3	NNC	ENSMUSG00000105961.2	novel	1027	3	NA	NA	9084	1676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTCTTCGTAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	108143186	108149239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108143301_108145985_108146078_108146699
ES.22384.5	chr3	+	4834	1	Genic_Genomic	ENSMUSG00000105961.2	novel	NA	NA	NA	NA	9084	457	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTTAAGGGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	108143186	108148020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_108143200_108148000
ES.22385.1	chr3	-	161	1	Intergenic	novelGene_18434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATAATAAAAAAAAGAAA	9393	False	NA	NA	False	NA	NA	NA	108145496	108145335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108145300_108145500
ES.22386.1	chr3	-	205	1	Intergenic	novelGene_18435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAAGTCCTGACTCTCT	NA	False	NA	NA	False	AAAACA	-10	NA	108163671	108163466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108163500_108163700
ES.22387.1	chr3	+	1018	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	214	7	214	-7	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTGTTAATAGTC	NA	False	NA	4	True	AATAAA	-8	NA	108164455	108187283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ES.22387.11	chr3	+	5511	5	NIC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	-3878	-2	intron_retention	FALSE	canonical	3	2585	junction_3	303.424619963509	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTAATAGTCTGTGA	NA	False	NA	9	True	AATAAA	-13	NA	108172312	108187288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108172509_108173748_108175217_108175348_108175408_108176143_108179694_108187050
ES.22387.12	chr3	+	1081	5	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	10362	21	-1587	-21	3prime_fragment	FALSE	canonical	3	2585	junction_2	148.553862285704	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAATTTAAAAAT	NA	False	NA	-10	True	NA	NA	NA	108174603	108187269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ES.22387.3	chr3	+	4339	8	NIC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	239	-21	intron_retention	FALSE	canonical	3	2544	junction_4	260.095586824756	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAATTTAAAAAT	NA	False	NA	-10	True	NA	NA	NA	108164480	108187269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108179694_108187050
ES.22387.7	chr3	+	1843	7	NIC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	243	-21	intron_retention	FALSE	canonical	3	2544	junction_4	261.424941426789	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAATTTAAAAAT	NA	False	NA	-10	True	NA	NA	NA	108164484	108187269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108176247_108179606_108179694_108187050
ES.22387.8	chr3	+	4394	5	NIC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	243	-2	intron_retention	FALSE	canonical	3	2749	junction_4	92.9045208803102	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTAATAGTCTGTGA	NA	False	NA	9	True	AATAAA	-13	NA	108164484	108187288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108164622_108169001_108169069_108172381_108176247_108179606_108179694_108187050
ES.22388.1	chr3	+	3609	20	NNC	ENSMUSG00000068747.15	novel	6796	20	NA	NA	-285	-3397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.5630261619729	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTTCAGGCTGTACTT	4695	False	NA	NA	False	ATTAAA	-21	NA	108191112	108265357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253191_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.10	chr3	+	3718	20	NNC	ENSMUSG00000068747.15	novel	6796	20	NA	NA	1	-3001	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.56679390947517	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAAAATTTTATCT	4990	False	NA	NA	False	AATACA	-19	NA	108191407	108265753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.11	chr3	+	3159	1	NIC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	4	-74185	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTCCTGATTTCTTTC	4993	False	NA	NA	False	NA	NA	NA	108191410	108194569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108191400_108194600
ES.22388.12	chr3	+	2898	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	6	-3937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.8224524015716	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGTGGGCTTTAGGCT	4995	False	NA	31	True	TTTAAA	-37	NA	108191412	108264817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247119_108247241_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.13	chr3	+	2832	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	31	-3956	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTTCTGTCTTTTGTA	5020	False	NA	12	True	TTTAAA	-18	NA	108191437	108264798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
ES.22388.14	chr3	+	2480	20	NNC	ENSMUSG00000068747.15	novel	5193	3	NA	NA	17825	-3953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6775287330631	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGTCTTTTGTAAGA	8617	False	NA	15	True	TTTAAA	-21	NA	108209231	108264801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108209292_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.15	chr3	+	5723	12	ISM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	53698	68	-17678	0	3prime_fragment	FALSE	canonical	3	29	junction_9	9.02887928577101	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTAATTTTCTGTATA	NA	False	NA	-45	True	AATAAA	-21	NA	108245104	108268759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.3	chr3	+	3174	18	NIC	ENSMUSG00000068747.15	novel	6796	20	NA	NA	-18	-3399	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.0985164499661	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTTCAGGCTGTAC	4962	False	NA	NA	False	ATTAAA	-19	NA	108191379	108265355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108191757_108215792_108215853_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.4	chr3	+	6832	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-26	-10	-17	10	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAAGCTACAGTTTTGT	4963	False	NA	33	True	AATAAA	-33	NA	108191380	108268837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.5	chr3	+	3436	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	-4	-3396	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTCAGGCTGTACTTT	4976	False	NA	NA	False	ATTAAA	-22	NA	108191393	108265358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
ES.22388.6	chr3	+	6909	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGATGAGTAAGCTACAG	4976	False	NA	27	True	AATAAA	-27	NA	108191393	108268831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
ES.22388.7	chr3	+	2779	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-9	4026	0	-3953	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGTCTTTTGTAAGA	4980	False	NA	15	True	TTTAAA	-21	NA	108191397	108264801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22388.9	chr3	+	3327	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	-1	3470	-1	-3397	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTTCAGGCTGTACTT	4988	False	NA	NA	False	ATTAAA	-21	NA	108191405	108265357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ES.22389.1	chr3	-	173	1	Intergenic	novelGene_18436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAGTTCTGGAA	3294	False	NA	NA	False	NA	NA	NA	108223346	108223173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108223200_108223300
ES.2239.1	chr1	+	3446	5	ISM	ENSMUSG00000016494.10	ENSMUST00000110815.9	2554	8	69	27	-7	-27	intron_retention	FALSE	canonical	0	0	junction_4	1.29903810567666	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTAATTAAATTGATGA	1146	False	NA	NA	False	AATAAA	-16	NA	194621251	194643560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724
ES.22390.1	chr3	-	179	1	Intergenic	novelGene_18437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGTTAAAAAAAAA	2451	False	NA	NA	False	NA	NA	NA	108224189	108224010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108224000_108224200
ES.22391.1	chr3	+	1679	8	NNC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	153.526571521888	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	6988	False	NA	68	True	AATAAA	-16	NA	108291110	108295547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292388_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.10	chr3	+	2523	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	155	junction_1	121.128604750855	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7031	False	NA	-1	True	AATAAA	-7	NA	108291153	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.11	chr3	+	2734	5	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	329	junction_1	71.2473683724529	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7031	False	NA	-1	True	AATAAA	-7	NA	108291153	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291748_108292285_108294053_108294593_108294712_108294914
ES.22391.12	chr3	+	1402	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	0	284	0	-284	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGTCTCCTTCCATCT	7032	False	NA	20	True	AATAAA	-16	NA	108291154	108295211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.13	chr3	+	2709	6	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	329	junction_1	65.8774620033286	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	7033	False	NA	68	True	AATAAA	-16	NA	108291155	108295547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.14	chr3	+	1394	8	NNC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	1	-284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	165.362310934357	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGTCTCCTTCCATCT	7046	False	NA	20	True	AATAAA	-16	NA	108291168	108295211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293602_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.15	chr3	+	1835	6	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	1	-17	intron_retention	FALSE	canonical	3	329	junction_1	63.7827562903956	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7046	False	NA	-1	True	AATAAA	-7	NA	108291168	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108294053_108294593_108294712_108294914
ES.22391.16	chr3	+	1446	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	1	-283	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTCCTTCCATCTT	7046	False	NA	21	True	AATAAA	-17	NA	108291168	108295212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.17	chr3	+	1473	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	2	-286	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7047	False	NA	18	True	AATAAA	-14	NA	108291169	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.18	chr3	+	1477	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	2	-286	intron_retention	FALSE	canonical	3	329	junction_1	59.5566956773124	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7047	False	NA	18	True	AATAAA	-14	NA	108291169	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108294053_108294593_108294712_108294914
ES.22391.19	chr3	+	2531	7	NNC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	2	-10	intron_retention	FALSE	canonical	0	0	junction_5	176.428140864458	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7047	False	NA	6	True	AATAAA	-14	NA	108291169	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294607_108294712_108294914
ES.22391.2	chr3	+	1763	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-37	-17	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	6995	False	NA	-1	True	AATAAA	-7	NA	108291117	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.20	chr3	+	1658	8	NNC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	7	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.971735365146	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7059	False	NA	-1	True	AATAAA	-7	NA	108291181	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291243_108291535_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.21	chr3	+	1733	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	8	-17	intron_retention	FALSE	canonical	3	329	junction_1	59.5566956773124	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7060	False	NA	-1	True	AATAAA	-7	NA	108291182	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108294053_108294593_108294712_108294914
ES.22391.22	chr3	+	1496	8	NNC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-1	-17	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	171.674704256721	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7071	False	NA	-1	True	AATAAA	-7	NA	108291193	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291212_108291551_108291602_108291689_108291748_108292388_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.23	chr3	+	1372	8	NNC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	4	-286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.971735365146	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7076	False	NA	18	True	AATAAA	-14	NA	108291198	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108291243_108291535_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.24	chr3	+	1992	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	14	-1	intron_retention	FALSE	canonical	3	403	junction_4	36.7090663944965	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAGCTCTCAGACATAG	7086	False	NA	67	True	AATAAA	-15	NA	108291208	108295546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.25	chr3	+	2230	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	14	-286	intron_retention	FALSE	canonical	3	329	junction_1	62.0118716232805	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7086	False	NA	18	True	AATAAA	-14	NA	108291208	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.26	chr3	+	2903	5	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	14	-10	intron_retention	FALSE	canonical	3	403	junction_2	42.6636554927025	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7086	False	NA	6	True	AATAAA	-14	NA	108291208	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.28	chr3	+	2467	6	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	28	-286	intron_retention	FALSE	canonical	3	403	junction_3	38.5538584320688	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7158	False	NA	18	True	AATAAA	-14	NA	108291280	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.29	chr3	+	1911	6	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	57	-17	intron_retention	FALSE	canonical	3	403	junction_3	39.4735354383161	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7187	False	NA	-1	True	AATAAA	-7	NA	108291309	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.3	chr3	+	1841	7	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	7017	False	NA	68	True	AATAAA	-16	NA	108291139	108295547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.30	chr3	+	1551	7	ISM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	158	286	60	-286	3prime_fragment	FALSE	canonical	3	403	junction_4	36.7090663944965	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATCTGTCTCCTTCCAT	7190	False	NA	18	True	AATAAA	-14	NA	108291312	108295209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.31	chr3	+	3436	3	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	72	6	intron_retention	FALSE	canonical	3	503	junction_2	0.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTAGATTTTAACAGT	7202	False	NA	22	True	AATAAA	-30	NA	108291324	108295501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291748_108292285_108294712_108294914
ES.22391.32	chr3	+	2207	4	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	10	-287	intron_retention	FALSE	canonical	3	443	junction_2	28.5228952870419	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTATCTGTCTCCTTCCA	7597	False	NA	17	True	AATAAA	-13	NA	108291719	108295208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291748_108292285_108294053_108294593_108294712_108294914
ES.22391.33	chr3	+	2677	3	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	-105	-10	intron_retention	FALSE	canonical	3	443	junction_1	30	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7942	False	NA	6	True	AATAAA	-14	NA	108292064	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108294053_108294593_108294712_108294914
ES.22391.34	chr3	+	3032	1	FSM	ENSMUSG00000068744.13	ENSMUST00000196430.2	2020	1	284	-1296	281	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	8331	False	NA	6	True	AATAAA	-14	NA	108292453	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108292500_108295500
ES.22391.4	chr3	+	1753	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	-15	-52	-15	0	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	7017	False	NA	68	True	AATAAA	-16	NA	108291139	108295547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.5	chr3	+	2353	6	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-9	-283	intron_retention	FALSE	canonical	3	155	junction_1	129.069903540678	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTCCTTCCATCTT	7023	False	NA	21	True	AATAAA	-17	NA	108291145	108295212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.6	chr3	+	1381	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-28	334	-8	-282	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTCCTTCCATCTTG	7024	False	NA	22	True	AATAAA	-18	NA	108291146	108295213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.7	chr3	+	1641	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	-23	69	-3	-17	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCTGTAT	7029	False	NA	-1	True	AATAAA	-7	NA	108291151	108295478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.8	chr3	+	2620	6	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-3	-10	intron_retention	FALSE	canonical	3	155	junction_1	129.069903540678	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7029	False	NA	6	True	AATAAA	-14	NA	108291151	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
ES.22391.9	chr3	+	3158	5	NIC	ENSMUSG00000068744.13	novel	1687	8	NA	NA	-3	-10	intron_retention	FALSE	canonical	3	155	junction_1	132.465089740656	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTGTATATCTGAA	7029	False	NA	6	True	AATAAA	-14	NA	108291151	108295485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108291212_108291551_108293724_108293815_108294053_108294593_108294712_108294914
ES.22392.1	chr3	-	6464	29	NIC	ENSMUSG00000068740.15	novel	11113	34	NA	NA	-1344	3	intron_retention	FALSE	canonical	0	0	junction_1	2.95026806115191	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGTTGAGGCCTGGAT	NA	False	NA	NA	False	NA	NA	NA	108311249	108298163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108300562_108300965_108301149_108301251_108301341_108301528_108301657_108302200_108302324_108302431_108302559_108302643_108302724_108302875_108302989_108303258_108303434_108303748_108303950_108304034_108304162_108304262_108304431_108304545_108304727_108304817_108304947_108305075_108305260_108305784_108305995_108306194_108306290_108306932_108307035_108307197_108307382_108307818_108307940_108308093_108308236_108308461_108308637_108308715_108309004_108309252_108309420_108309763_108309890_108310020_108310185_108310536_108310695_108310939_108311029_108311212
ES.22392.2	chr3	-	7090	32	NNC	ENSMUSG00000068740.15	novel	11113	34	NA	NA	23	-26	intron_retention	FALSE	canonical	1	1	junction_13	2.76818554231289	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCATCGCTGGCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	108323360	108298192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108300562_108300655_108300827_108300965_108301149_108301251_108301341_108301528_108301657_108302200_108302324_108302431_108302559_108302643_108302724_108302875_108302989_108303258_108303434_108303748_108303950_108304034_108304162_108304262_108304431_108304545_108304727_108304817_108304947_108305075_108305260_108305784_108305995_108306194_108306290_108306932_108307035_108307197_108307382_108307818_108307940_108308093_108308236_108308461_108308637_108308715_108309004_108309252_108309420_108309763_108309890_108310020_108310185_108310536_108310695_108310939_108311029_108311212_108311329_108311664_108311888_108323178
ES.22392.3	chr3	-	4405	14	NNC	ENSMUSG00000068740.15	novel	3486	18	NA	NA	-1044	-27	intron_retention	FALSE	canonical	0	0	junction_6	3.3370787636129	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTCATCGCTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	108304853	108298193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108300562_108300655_108301149_108301251_108301341_108301528_108301657_108302200_108302324_108302431_108302559_108302645_108302724_108302875_108302989_108303258_108303434_108303748_108303950_108304034_108304162_108304262_108304431_108304545_108304725_108304817
ES.22392.4	chr3	-	4603	19	NNC	ENSMUSG00000068740.15	novel	11113	34	NA	NA	-720	-329	intron_retention	FALSE	canonical	0	0	junction_13	3.03935097035332	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTCCCTGTCTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	108306987	108298495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108300562_108300655_108300827_108300965_108301149_108301251_108301341_108301528_108301657_108302200_108302324_108302431_108302559_108302643_108302724_108302875_108302989_108303258_108303434_108303748_108303950_108304034_108304162_108304262_108304429_108304545_108304727_108304817_108304947_108305075_108305260_108305784_108305995_108306194_108306290_108306932
ES.22392.5	chr3	-	4294	24	NIC	ENSMUSG00000068740.15	novel	11113	34	NA	NA	1005	34	intron_retention	FALSE	canonical	1	1	junction_13	2.80089102754894	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTCCACTCTTCATGAC	NA	False	NA	NA	False	NA	NA	NA	108308900	108299660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108300562_108300655_108300827_108300965_108301149_108301251_108301341_108301528_108301657_108302200_108302324_108302431_108302559_108302643_108302724_108302875_108302989_108303258_108303434_108303748_108303950_108304034_108304162_108304262_108304431_108304545_108304727_108304817_108304947_108305075_108305260_108305784_108305995_108306194_108306290_108306932_108307035_108307197_108307382_108307818_108307940_108308093_108308236_108308461_108308637_108308715
ES.22392.6	chr3	-	3414	17	NNC	ENSMUSG00000068740.15	novel	11113	34	NA	NA	52	-2656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	3.12187343593554	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGCTCAGTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	108323331	108305531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108305995_108306194_108306290_108306932_108307035_108307197_108307382_108307818_108307940_108308093_108308236_108308461_108308637_108308715_108309004_108309252_108309420_108309763_108309890_108310020_108310185_108310536_108310695_108310939_108311029_108311212_108311329_108311664_108311888_108314065_108314714_108323178
ES.22393.1	chr3	+	3317	2	Antisense	novelGene_ENSMUSG00000068739.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAACAAAAAACCCAACA	NA	False	NA	NA	False	NA	NA	NA	108342174	108347033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108343285_108344826
ES.22393.2	chr3	+	4858	1	Antisense	novelGene_ENSMUSG00000068739.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAACAAAAAACCCAACA	NA	False	NA	NA	False	NA	NA	NA	108342175	108347033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108342200_108347000
ES.22394.1	chr3	-	2486	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	6	1078	6	669	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCTGCCTTTTATCT	NA	False	NA	NA	False	NA	NA	NA	108352508	108333258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.10	chr3	-	1901	12	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	8	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1025.83245776538	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352506	108333883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335206_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.11	chr3	-	2413	11	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-3	44	intron_retention	FALSE	canonical	3	101	junction_2	785.320501451477	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352517	108333883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.12	chr3	-	2668	10	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-6	44	intron_retention	FALSE	canonical	3	2549	junction_6	101.739803687254	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352531	108333883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.13	chr3	-	1820	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	6	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	821.24537137204	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCTGGGTCTCCCT	NA	False	NA	3	True	NA	NA	NA	108352479	108333885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341514_108343201_108343283_108344824_108344896_108352312
ES.22394.14	chr3	-	4900	8	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	4	42	intron_retention	FALSE	canonical	3	2563	junction_3	93.0729360693614	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGCTGGGTCTCCCT	NA	False	NA	3	True	NA	NA	NA	108352481	108333885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.15	chr3	-	4104	9	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	2	41	intron_retention	FALSE	canonical	3	2563	junction_4	95.0064964883981	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTGCTGGGTCTCCC	NA	False	NA	2	True	NA	NA	NA	108352470	108333886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.16	chr3	-	1788	10	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	5	41	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	859.934364420396	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTGCTGGGTCTCCC	NA	False	NA	2	True	NA	NA	NA	108352509	108333886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108352312
ES.22394.17	chr3	-	3203	2	NIC	ENSMUSG00000068739.14	novel	1067	8	NA	NA	14865	41	intron_retention	FALSE	canonical	3	2563	junction_1	0	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTGCTGGGTCTCCC	NA	False	NA	2	True	NA	NA	NA	108337594	108333886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108336052_108336556
ES.22394.18	chr3	-	4048	9	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-5	39	intron_retention	FALSE	canonical	3	2549	junction_5	105.468004626996	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTCTGCTGGGTCTC	NA	False	NA	0	True	NA	NA	NA	108352519	108333888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.19	chr3	-	1867	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-11	37	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_10	794.189404361453	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108352536	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352327
ES.22394.2	chr3	-	4174	9	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	199	intron_retention	FALSE	canonical	3	2549	junction_5	105.468004626996	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGGGATTCTCTGTA	NA	False	NA	NA	False	AGTAAA	-44	NA	108352485	108333728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.20	chr3	-	4176	10	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-5	37	intron_retention	FALSE	canonical	0	0	junction_5	1137.51904610293	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108352519	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108340762_108340893_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.22	chr3	-	1256	7	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	12064	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1026.73847151497	1258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108340395	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334289_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333
ES.22394.23	chr3	-	3682	10	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	1	37	intron_retention	FALSE	canonical	0	0	junction_6	866.800132173388	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108352524	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108340893_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.24	chr3	-	6647	7	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-30	37	intron_retention	FALSE	canonical	3	2563	junction_3	99.8227595958624	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108352555	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108343283_108344824_108344896_108352312
ES.22394.27	chr3	-	2865	9	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	2	37	intron_retention	FALSE	canonical	3	2549	junction_5	100.889094430469	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTCTCTGCTGGGTC	NA	False	NA	-2	True	NA	NA	NA	108352457	108333890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.28	chr3	-	1670	10	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	6	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	849.509662491644	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTTGTCTCTGCTGGGT	NA	False	NA	-3	True	NA	NA	NA	108352479	108333891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334289_108335504_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.29	chr3	-	1868	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-11	32	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	824.325961012996	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAACCTTGTCTCTGCT	NA	False	NA	-7	True	NA	NA	NA	108352536	108333895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336043_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.3	chr3	-	2023	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-1	1548	-1	199	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTGGGATTCTCTGTA	NA	False	NA	NA	False	AGTAAA	-44	NA	108352515	108333728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.30	chr3	-	1902	12	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-5	32	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	991.989002871595	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAACCTTGTCTCTGCT	NA	False	NA	-7	True	NA	NA	NA	108352519	108333895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335176_108335219_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.32	chr3	-	4318	8	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-5	31	intron_retention	FALSE	canonical	3	2549	junction_4	106.087564910179	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAACCTTGTCTCTGC	NA	False	NA	-8	True	NA	NA	NA	108352519	108333896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.33	chr3	-	2322	11	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	2	30	intron_retention	FALSE	canonical	3	13	junction_2	811.526838742872	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGAACCTTGTCTCTG	NA	False	NA	-9	True	NA	NA	NA	108352470	108333897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108335219_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.35	chr3	-	1840	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-1	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	813.644400214246	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGAACCTTGTCTCTG	NA	False	NA	-9	True	NA	NA	NA	108352515	108333897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338794_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.36	chr3	-	3524	10	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	5	28	intron_retention	FALSE	canonical	3	2549	junction_7	111.537736514001	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTTGAACCTTGTCTC	NA	False	NA	-11	True	NA	NA	NA	108352509	108333899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108343283_108344824_108344896_108352312
ES.22394.37	chr3	-	1866	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-29	27	at_least_one_novel_splicesite	TRUE	canonical	2	57	junction_6	806.022958730085	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGAACCTTGTCT	NA	False	NA	-12	True	AATAAA	-45	NA	108352554	108333900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338913_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.38	chr3	-	3236	10	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	11	27	intron_retention	FALSE	canonical	3	2549	junction_6	108.41973762269	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGAACCTTGTCT	NA	False	NA	-12	True	AATAAA	-45	NA	108352503	108333900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.39	chr3	-	1940	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-6	25	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	812.15377854197	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGACTTGAACCTTGT	NA	False	NA	-14	True	AATAAA	-43	NA	108352531	108333902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336854_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.4	chr3	-	2029	12	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	-5	121	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1025.63597685767	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTGTTAGTAAAGAGGTA	NA	False	NA	71	True	NA	NA	NA	108352519	108333806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335168_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.40	chr3	-	1791	11	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	2	24	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	1185.41110590377	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAGACTTGAACCTTG	NA	False	NA	-15	True	AATAAA	-42	NA	108352457	108333903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108352312
ES.22394.42	chr3	-	1839	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	-3	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	813.644400214246	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTCCCCAGACTTGAAC	NA	False	NA	-19	True	AATAAA	-38	NA	108352517	108333907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338787_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.43	chr3	-	5954	7	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	2549	junction_4	118.145390656315	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352512	108333927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108336052_108336556_108336779_108338780_108340478_108341364_108343283_108344824_108344896_108352312
ES.22394.45	chr3	-	4515	8	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	2549	junction_4	96.6983527707242	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAAGGCTTCCCCAGTCT	NA	False	NA	-41	True	AATAAA	-16	NA	108352522	108333929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108335648_108335921_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.46	chr3	-	1481	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	37	2052	-5	-305	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	1260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAACATGAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	108352477	108334232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.47	chr3	-	1039	7	NNC	ENSMUSG00000068739.14	novel	1801	3	NA	NA	2	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	990.913509511972	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCACTCTGAGCTGGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	108352512	108337212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108337441_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.48	chr3	-	1841	3	FSM	ENSMUSG00000068739.14	ENSMUST00000197647.2	1801	3	-38	-2	4	2	multi-exon	FALSE	canonical	3	2675	junction_1	18	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTTCCTTGTCCGTT	NA	False	NA	NA	False	NA	NA	NA	108352510	108341710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108343283_108344824_108344896_108352312
ES.22394.49	chr3	-	607	3	FSM	ENSMUSG00000068739.14	ENSMUST00000197647.2	1801	3	-69	1263	-16	-1263	multi-exon	FALSE	canonical	3	2675	junction_1	18	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCATTTTCTGCTTTCT	NA	False	NA	NA	False	AAGAAA	-27	NA	108352541	108342975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108343283_108344824_108344896_108352312
ES.22394.5	chr3	-	1939	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	-51	1682	-40	65	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAACTGCTCTCCCAGAT	NA	False	NA	15	True	NA	NA	NA	108352565	108333862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.50	chr3	-	7261	1	Genic_Genomic	ENSMUSG00000068739.14	novel	NA	NA	NA	NA	-30	-3582	mono-exon	FALSE	NA	NA	NA	NA	NA	1151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAGAAGTCAAATGTA	NA	False	NA	NA	False	NA	NA	NA	108352555	108345294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_108345300_108352600
ES.22394.51	chr3	-	6589	2	Antisense	novelGene_ENSMUSG00000089188.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	108352267	108345312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_108351019_108351384
ES.22394.6	chr3	-	1996	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	-84	-46	-44	46	multi-exon	FALSE	canonical	3	101	junction_3	974.241336537401	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGGTCTCCCTGGGC	NA	False	NA	-4	True	NA	NA	NA	108352569	108333881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22394.7	chr3	-	1720	10	NIC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	1	46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	864.870075163652	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGGTCTCCCTGGGC	NA	False	NA	-4	True	NA	NA	NA	108352524	108333881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108343201_108343283_108344824_108344896_108352312
ES.22394.9	chr3	-	1814	11	NNC	ENSMUSG00000068739.14	novel	3570	11	NA	NA	0	44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1103.37154213801	1270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGGGTCTCCCTGG	NA	False	NA	5	True	NA	NA	NA	108352472	108333883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336048_108336556_108336779_108338780_108338937_108340333_108340471_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ES.22395.1	chr3	+	2000	1	Antisense	novelGene_ENSMUSG00000040412.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108381851	108383851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108381900_108383900
ES.22396.1	chr3	-	5455	20	ISM	ENSMUSG00000040412.18	ENSMUST00000106625.10	5836	22	47532	1	-18923	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	0.80854165767038	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCTTATTTGAATTAT	2487	False	NA	NA	False	AATAAA	-14	NA	108396320	108363010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108365785_108367000_108367167_108368254_108368434_108368511_108368639_108370205_108370308_108370785_108370883_108371570_108371752_108372921_108373096_108375068_108375333_108376843_108376982_108377217_108377324_108378663_108378755_108379284_108379414_108380038_108380217_108382276_108382366_108388291_108388442_108388579_108388686_108389097_108389179_108389646_108389795_108396145
ES.22397.1	chr3	-	153	1	Intergenic	novelGene_18438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	108423275	108423122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108423100_108423300
ES.22398.1	chr3	+	180	1	Intergenic	novelGene_18439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAGCATGAGA	NA	False	NA	NA	False	NA	NA	NA	108455929	108456109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108455900_108456100
ES.22399.1	chr3	-	2887	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	-15	-8	-15	8	multi-exon	FALSE	canonical	3	163	junction_1	15	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTCATGTGTGTTT	5259	False	NA	-6	True	AATAAA	-23	NA	108469797	108463732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108466277_108467502_108467635_108469586
ES.22399.2	chr3	-	2737	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	15	0	15	0	multi-exon	FALSE	canonical	1	2	junction_2	80.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5585	False	NA	-14	True	AATAAA	-15	NA	108469471	108463740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108466277_108467502_108467635_108469402
ES.22399.3	chr3	-	4053	2	NIC	ENSMUSG00000068732.6	novel	2864	3	NA	NA	35	-2	intron_retention	FALSE	canonical	3	193	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGCCTGCTTTGTC	5309	False	NA	-16	True	AATAAA	-13	NA	108469747	108463742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108467635_108469586
ES.22399.4	chr3	-	2486	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	68	310	68	-310	multi-exon	FALSE	canonical	3	163	junction_1	15	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTATTTCATTTTTGGC	5342	False	NA	NA	False	ATTAAA	-20	NA	108469714	108464050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108466277_108467502_108467635_108469586
ES.22399.5	chr3	-	5661	1	NIC	ENSMUSG00000068732.6	novel	2864	3	NA	NA	61	-320	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAAATGGCCTATTT	5335	False	NA	NA	False	ATTAAA	-10	NA	108469721	108464060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108464100_108469700
ES.22399.6	chr3	-	1022	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	88	1754	88	-1754	multi-exon	FALSE	canonical	3	163	junction_1	15	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTGTTTGGCTGTTG	5362	False	NA	NA	False	GGGGCT	-29	NA	108469694	108465494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108466277_108467502_108467635_108469586
ES.224.1	chr1	+	177	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33757020	33757197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33757000_33757200
ES.2240.1	chr1	-	3260	3	ISM	ENSMUSG00000097325.3	ENSMUST00000180780.3	2492	5	15326	346	15326	-346	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTGTTGTTGAGCCT	7902	False	NA	NA	False	AATAAA	-12	NA	194643942	194638412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_194639087_194641192_194641522_194641685
ES.22400.1	chr3	+	179	1	Intergenic	novelGene_18440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCAATCAAAC	NA	False	NA	NA	False	NA	NA	NA	108474727	108474906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108474700_108474900
ES.22401.1	chr3	-	263	1	Intergenic	novelGene_18441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCGTTATATCATCTG	NA	False	NA	NA	False	NA	NA	NA	108477083	108476820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108476800_108477100
ES.22402.1	chr3	+	1147	4	NNC	ENSMUSG00000048100.14	novel	2443	4	NA	NA	-4	-217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.5259578327656	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTTTCGCGGTTCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	108479009	108489168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108479065_108480195_108480275_108485362_108485530_108488322
ES.22402.10	chr3	+	192	1	Intergenic	novelGene_18442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTATGTGTGGGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	108484464	108484656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108484500_108484700
ES.22402.2	chr3	+	1302	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	-5	1146	-4	7	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGTTTGCTTGTTTG	NA	False	NA	21	True	AATAAA	-30	NA	108479009	108489392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
ES.22402.4	chr3	+	2378	4	NNC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.1554046143421	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479014	108489381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108479618_108479656_108480275_108485431_108485530_108488322
ES.22402.5	chr3	+	999	3	NIC	ENSMUSG00000048100.14	novel	2443	4	NA	NA	0	-212	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGCGGTTCAGGCTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	108479014	108489173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108479065_108485431_108485530_108488322
ES.22402.6	chr3	+	801	2	NNC	ENSMUSG00000048100.14	novel	463	2	NA	NA	1	-765	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108479015	108479855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108479618_108479656
ES.22402.7	chr3	+	1185	3	NIC	ENSMUSG00000048100.14	novel	2443	4	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGAGTTTGTGT	NA	False	NA	10	True	AATAAA	-19	NA	108479017	108489381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108479065_108480195_108480275_108488322
ES.22402.8	chr3	+	1075	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	3	1365	3	-212	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCGCGGTTCAGGCTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	108479017	108489173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
ES.22402.9	chr3	+	2025	4	NNC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6267118681313	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATCAGTACTTGAGT	NA	False	NA	4	True	AATAAA	-13	NA	108479017	108489375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108479813_108480195_108480275_108485431_108485530_108488322
ES.22403.1	chr3	-	182	1	Intergenic	novelGene_18443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTTTCTTCTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	108490765	108490583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108490600_108490800
ES.22404.1	chr3	+	4252	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	-30	0	-30	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498564	108553035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.10	chr3	+	5245	14	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	-2	intron_retention	FALSE	canonical	3	33	junction_5	7.71995033248885	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498676	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.11	chr3	+	4210	16	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.6118241986109	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTGTCCTTTTCTCAC	NA	False	NA	-1	True	AATAAA	-14	NA	108498676	108553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108525980_108526066_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537245_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.13	chr3	+	4124	15	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	14.0734226288347	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498676	108553035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550581_108551761
ES.22404.15	chr3	+	6035	13	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	-2	intron_retention	FALSE	canonical	3	33	junction_5	8.80656320908194	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498676	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108545380_108545941_108546074_108550377
ES.22404.16	chr3	+	4276	16	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.9534934769572	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498676	108553035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108524141_108524281_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.17	chr3	+	5280	14	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	103	4	-7	-4	intron_retention	FALSE	canonical	3	33	junction_5	8.49085829325946	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTGTCCTTTTCTCAC	NA	False	NA	-1	True	AATAAA	-14	NA	108498697	108553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377
ES.22404.18	chr3	+	3998	16	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.8458748479165	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498726	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526443_108526532_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.20	chr3	+	3809	1	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	14713	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTGTCCTTTTCTCAC	NA	False	NA	-1	True	AATAAA	-14	NA	108549222	108553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108549200_108553000
ES.22404.3	chr3	+	4039	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	51	132	-22	-132	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGCTGCAGTGGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	108498645	108552903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.4	chr3	+	4083	14	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.9484542860435	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498650	108553035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540374_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.5	chr3	+	4300	16	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	20.9534934769572	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498659	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525453_108525602_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.7	chr3	+	4216	16	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	18.2858779754578	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATCTGTCCTTTTCTCA	NA	False	NA	-2	True	AATAAA	-13	NA	108498664	108553030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108523240_108523310_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.8	chr3	+	4170	15	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	14.3834159037839	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498665	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521755_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ES.22404.9	chr3	+	4153	15	NNC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.36445008878	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTTCTCACGG	NA	False	NA	1	True	AATAAA	-16	NA	108498667	108553033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545202_108545380_108545941_108546074_108550377_108550597_108551761
ES.22405.1	chr3	-	194	1	Intergenic	novelGene_18444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGTGTGTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	108503040	108502846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108502800_108503000
ES.22406.1	chr3	-	160	1	Intergenic	novelGene_18445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	108506946	108506786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108506800_108506900
ES.22407.1	chr3	-	187	1	Intergenic	novelGene_18446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGTGATCACAGG	5200	False	NA	NA	False	NA	NA	NA	108557231	108557044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108557000_108557200
ES.22408.1	chr3	+	3683	11	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-9	-1	intron_retention	TRUE	canonical	3	126	junction_1	24.3014402865345	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6587	False	NA	5	True	AATAAA	-17	NA	108561219	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
ES.22408.10	chr3	+	3386	11	NNC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-8	2	intron_retention	FALSE	canonical	3	14	junction_9	53.9445085249648	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGTCTGGTGTGCAG	6624	False	NA	4	True	AATAAA	-16	NA	108561256	108586154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561368_108568670_108568812_108569247_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582092_108584000_108584295_108585855
ES.22408.11	chr3	+	4469	10	ISM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	28	828	-8	0	intron_retention	FALSE	canonical	3	66	junction_1	40.6223194747195	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTCTTTTTTTCAG	6624	False	NA	NA	False	AATATA	-24	NA	108561256	108585328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952
ES.22408.13	chr3	+	2155	12	NNC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.9718322617081	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6626	False	NA	5	True	AATAAA	-17	NA	108561258	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561440_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.15	chr3	+	5284	10	ISM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	40	1	4	-1	intron_retention	FALSE	canonical	3	66	junction_1	40.6223194747195	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6636	False	NA	5	True	AATAAA	-17	NA	108561268	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952
ES.22408.16	chr3	+	3559	11	ISM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	44	1	0	-1	intron_retention	FALSE	canonical	3	66	junction_1	38.5766768916142	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6640	False	NA	5	True	AATAAA	-17	NA	108561272	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
ES.22408.17	chr3	+	1820	12	NNC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	72.2320640323961	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6643	False	NA	5	True	AATAAA	-17	NA	108561275	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575265_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582092_108584000_108584295_108585855
ES.22408.18	chr3	+	2019	12	NNC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.8363201651749	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6643	False	NA	5	True	AATAAA	-17	NA	108561275	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575254_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.19	chr3	+	3556	11	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	126	junction_1	23.4955314900515	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6643	False	NA	5	True	AATAAA	-17	NA	108561275	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561368_108568670_108568812_108569247_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.2	chr3	+	2041	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	1	1	1	-1	multi-exon	FALSE	canonical	3	66	junction_1	36.8117839559091	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6597	False	NA	5	True	AATAAA	-17	NA	108561229	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.20	chr3	+	2694	12	NNC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.0186961624419	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGCCTTTTTCTTTTT	6643	False	NA	NA	False	AATATA	-19	NA	108561275	108585323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561368_108566622_108566710_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582092_108584000
ES.22408.21	chr3	+	5411	10	NIC	ENSMUSG00000027884.17	novel	3064	11	NA	NA	2	-1	intron_retention	FALSE	canonical	2	9	junction_1	57.1108949412251	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6643	False	NA	5	True	AATAAA	-17	NA	108561275	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561662_108568670_108568812_108569247_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
ES.22408.22	chr3	+	2099	12	NIC	ENSMUSG00000027884.17	novel	3064	11	NA	NA	231	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	51.8028685507149	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6904	False	NA	5	True	AATAAA	-17	NA	108561536	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561662_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.23	chr3	+	3108	8	ISM	ENSMUSG00000027884.17	ENSMUST00000029483.15	2224	13	12520	-3	-1373	-1	3prime_fragment	FALSE	canonical	3	164	junction_5	7.71693076346829	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	2096	False	NA	5	True	AATAAA	-17	NA	108573793	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.3	chr3	+	2112	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6597	False	NA	5	True	AATAAA	-17	NA	108561229	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.4	chr3	+	1845	12	NNC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	57.5133473549135	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTCTGGTGTGCAGT	6605	False	NA	5	True	AATAAA	-17	NA	108561237	108586155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582092_108584000_108584295_108585855
ES.22408.5	chr3	+	4027	10	NIC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	11	2	intron_retention	FALSE	canonical	3	66	junction_1	35.1473090482519	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGTCTGGTGTGCAG	6607	False	NA	4	True	AATAAA	-16	NA	108561239	108586154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561297_108568670_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
ES.22408.6	chr3	+	2823	11	NIC	ENSMUSG00000027884.17	novel	3064	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	24.3014402865345	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTTTCTTTTTTTCAG	6620	False	NA	NA	False	AATATA	-24	NA	108561252	108585328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000
ES.22408.8	chr3	+	2781	12	NNC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2437108362735	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGTCTGGTGTGCAG	6624	False	NA	4	True	AATAAA	-16	NA	108561256	108586154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_108562065_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ES.22408.9	chr3	+	2522	1	NIC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	-8	-6533	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGTCTTTTACCTGTA	6624	False	NA	NA	False	NA	NA	NA	108561256	108563778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_108561300_108563800
ES.22409.1	chr3	+	174	1	Intergenic	novelGene_18449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGGC	9534	False	NA	NA	False	NA	NA	NA	108601970	108602144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108602000_108602100
ES.2241.1	chr1	-	3343	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAACCGGTGGTTGCA	NA	False	NA	NA	False	NA	NA	NA	194653088	194649745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_194649700_194653100
ES.22410.1	chr3	-	2598	1	Intergenic	novelGene_18447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108565817	108563219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108563200_108565800
ES.22411.1	chr3	-	3569	15	NNC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	10	9344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.1440911513891	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAAAATTCAACACTA	NA	False	NA	NA	False	NA	NA	NA	108629615	108576609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108576632_108585590_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ES.22411.10	chr3	-	4103	13	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	-62	-447	intron_retention	FALSE	canonical	3	65	junction_12	20.0975053731109	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGTCTCCTTTATTA	NA	False	NA	3	True	AATAAA	-21	NA	108629494	108586400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604953_108606233_108606390_108607979_108608096_108608202_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.11	chr3	-	3042	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	6	450	6	-450	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTATCTGTCTCCTTTA	NA	False	NA	0	True	AATAAA	-18	NA	108629619	108586403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.13	chr3	-	3017	15	NNC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	8	-452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.2853982285415	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629617	108586405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108587120_108589321_108589540_108590008_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.14	chr3	-	2844	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	46	-452	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	34.6222215470364	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629579	108586405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.15	chr3	-	3466	14	NNC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	11	-452	intron_retention	FALSE	canonical	1	2	junction_9	32.9184036942126	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTATCTGTCTCCTT	NA	False	NA	-2	True	AATAAA	-16	NA	108629614	108586405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108587120_108589321_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608310_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.16	chr3	-	3773	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	6	-453	intron_retention	FALSE	canonical	3	65	junction_13	19.590481929971	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629619	108586406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.17	chr3	-	6525	13	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	20	-453	intron_retention	FALSE	canonical	3	65	junction_12	20.1912728672563	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629605	108586406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.18	chr3	-	2732	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	8	-454	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGTTATCTGTCTCC	NA	False	NA	-4	True	AATAAA	-14	NA	108629617	108586407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ES.22411.2	chr3	-	3867	16	NNC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	16	9344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2404852458658	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAAAATTCAACACTA	NA	False	NA	NA	False	NA	NA	NA	108629609	108576609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108576632_108585590_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.3	chr3	-	176	1	Intergenic	novelGene_18448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTGAGCTCTGACA	NA	False	NA	NA	False	NA	NA	NA	108579724	108579548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108579500_108579700
ES.22411.4	chr3	-	3990	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	116	-608	-77	608	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAAGGCATTT	NA	False	NA	NA	False	NA	NA	NA	108629509	108585345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.5	chr3	-	3860	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	8	-370	8	370	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTACATGTCTGCTA	NA	False	NA	NA	False	AATAAA	-20	NA	108629617	108585583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.6	chr3	-	3419	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	-50	368	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCGTTACATGTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	108629482	108585585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ES.22411.8	chr3	-	3504	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	-6	0	-6	0	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTAATCAAGTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	108629631	108585953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ES.22411.9	chr3	-	3169	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGTGTTAATCAAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	108629603	108585956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ES.22412.1	chr3	-	178	1	Intergenic	novelGene_18450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	108660434	108660256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108660300_108660400
ES.22413.1	chr3	-	194	1	Intergenic	novelGene_18451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAAATGA	6723	False	NA	NA	False	NA	NA	NA	108697774	108697580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_108697600_108697800
ES.22414.1	chr3	-	2491	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-72	0	-57	0	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	False	NA	3	True	AATAAA	-17	NA	108747899	108700491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.10	chr3	-	1858	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-32	593	-17	-593	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTGTCGTTTAGAGG	NA	False	NA	NA	False	AATAAA	-38	NA	108747859	108701084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.11	chr3	-	1781	16	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	-37	5796	-22	1140	5prime_fragment	FALSE	canonical	1	38	junction_7	23.9066703848296	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTCGCTGGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	108747864	108706287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.2	chr3	-	3370	18	NIC	ENSMUSG00000027882.19	novel	2419	19	NA	NA	1	0	intron_retention	FALSE	canonical	1	38	junction_9	22.5844053125558	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	False	NA	3	True	AATAAA	-17	NA	108747841	108700491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.4	chr3	-	2533	20	NNC	ENSMUSG00000027882.19	novel	2419	19	NA	NA	-48	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	39.283471533637	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTCTGAGTTTTTCT	NA	False	NA	-1	True	AATAAA	-13	NA	108747890	108700495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709060_108709116_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.5	chr3	-	2563	20	NNC	ENSMUSG00000027882.19	novel	2419	19	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	39.1074236139055	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTCTGAGTTTTTCT	NA	False	NA	-1	True	AATAAA	-13	NA	108747864	108700495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729903_108733068_108733187_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.7	chr3	-	6467	17	NNC	ENSMUSG00000027882.19	novel	2419	19	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_4	33.8926960236273	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTCTGAGTTTTTCT	NA	False	NA	-1	True	AATAAA	-13	NA	108747847	108700495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706627_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108733399_108734341_108734424_108734888_108734939_108747735
ES.22414.8	chr3	-	2439	19	NNC	ENSMUSG00000027882.19	novel	2419	19	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	32.8320172701083	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTTCTGAGTTTTT	NA	False	NA	-3	True	AATAAA	-11	NA	108747860	108700497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729903_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ES.22415.1	chr3	+	5489	1	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCTCAAGTGCTAA	NA	False	NA	NA	False	NA	NA	NA	108808839	108814328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108808800_108814300
ES.22415.2	chr3	+	2082	3	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	108811132	108814299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108812079_108812426_108812650_108813386
ES.22415.3	chr3	+	2271	3	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAAGTGCTAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	108811132	108814334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108812079_108812426_108812650_108813232
ES.22415.4	chr3	+	2854	2	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAAGTGCTAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	108811132	108814334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_108812079_108812426
ES.22416.1	chr3	-	3885	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	12	-871	-5	869	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTATGTTCAGTTGA	6862	False	NA	NA	False	NA	NA	NA	108819031	108809251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.10	chr3	-	5404	5	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	54	-1	intron_retention	FALSE	canonical	3	21	junction_3	182.628550615724	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGGTGTTGGTTTCCC	6935	False	NA	-8	True	AATAAA	-19	NA	108818958	108810121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815641_108815721_108818479
ES.22416.11	chr3	-	2879	7	NNC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.219663721739	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGGTGTTGGTTTCCC	6863	False	NA	-8	True	AATAAA	-19	NA	108819030	108810121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108811540_108811674_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.12	chr3	-	4882	6	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	21	junction_4	180.544066643022	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6873	False	NA	-9	True	AATAAA	-18	NA	108819020	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815641_108815721_108818479
ES.22416.13	chr3	-	5542	6	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	28	junction_4	187.358479925516	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6839	False	NA	-9	True	AATAAA	-18	NA	108819054	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.14	chr3	-	4878	6	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_2	145.648343622576	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6867	False	NA	-9	True	AATAAA	-18	NA	108819026	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.15	chr3	-	3120	8	NNC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	188.770241515003	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6869	False	NA	-9	True	AATAAA	-18	NA	108819024	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108812079_108812426_108812651_108813391_108813442_108815102_108815164_108815247_108815400_108815641_108815721_108817658_108817712_108818479
ES.22416.16	chr3	-	3319	8	NNC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	189.862141178965	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6863	False	NA	-9	True	AATAAA	-18	NA	108819030	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815641_108815721_108817971_108818197_108818479
ES.22416.17	chr3	-	3155	8	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	183.68595649163	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6855	False	NA	-9	True	AATAAA	-18	NA	108819038	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815641_108815721_108817658_108817712_108818479
ES.22416.18	chr3	-	3087	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	-39	2	-8	0	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6842	False	NA	-9	True	AATAAA	-18	NA	108819051	108810122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.19	chr3	-	3144	8	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	175.838399836733	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCCTGGGTGTTGGTTTC	6856	False	NA	-10	True	AATAAA	-17	NA	108819037	108810123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108813387_108813442_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.2	chr3	-	3598	8	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	14	491	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	177.915710379944	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGGTTAGTTATTGGT	6895	False	NA	NA	False	AATAAA	-21	NA	108818998	108809629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.20	chr3	-	3089	7	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATCCTGGGTGTTGGTTT	6856	False	NA	-11	True	AATAAA	-16	NA	108819037	108810124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.21	chr3	-	2800	4	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	216.057091220507	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATCCTGGGTGTTGGTTT	6861	False	NA	-11	True	AATAAA	-16	NA	108819032	108810124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108815651_108815721_108818479
ES.22416.22	chr3	-	5719	6	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	28	junction_5	178.667960194322	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTATCCTGGGTGT	6839	False	NA	-17	True	AATAAA	-10	NA	108819054	108810130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815651_108815721_108817658
ES.22416.23	chr3	-	2832	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	22	172	5	168	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTGCTGTTTGAGTTT	6872	False	NA	NA	False	TTTAAA	-19	NA	108819021	108810294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.24	chr3	-	5097	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-1	-25	intron_retention	FALSE	canonical	3	234	junction_3	120.261174117003	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTAGCAGCCCTATACT	6866	False	NA	NA	False	ATTAAA	-15	NA	108819027	108810487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.25	chr3	-	2402	7	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	5	-350	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGATGTTTGTTTAGG	6855	False	NA	89	True	AATAGA	-23	NA	108819038	108810812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.26	chr3	-	2347	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-12	691	-12	-351	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGATGTTTGTTTAG	6838	False	NA	88	True	AATAGA	-22	NA	108819055	108810813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.27	chr3	-	2296	4	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	-780	-442	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	235.03947658969	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	4161	False	NA	-3	True	AATAAA	-15	NA	108814214	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108813387
ES.22416.28	chr3	-	4707	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-11	-442	intron_retention	FALSE	canonical	3	234	junction_3	120.261174117003	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	6839	False	NA	-3	True	AATAAA	-15	NA	108819054	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.29	chr3	-	3518	5	NNC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	-402	-442	intron_retention	FALSE	canonical	0	0	junction_4	207.301712486897	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	2676	False	NA	-3	True	AATAAA	-15	NA	108815699	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815661
ES.22416.3	chr3	-	3526	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-8	-492	-8	490	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTGGTTAGTTATTGG	6842	False	NA	NA	False	AATAAA	-20	NA	108819051	108809630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.30	chr3	-	3048	6	NNC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-11	-442	intron_retention	FALSE	non_canonical	0	0	junction_2	170.7423790393	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	6839	False	NA	-3	True	AATAAA	-15	NA	108819054	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108812079_108812426_108813444_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.31	chr3	-	3530	6	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	429	-442	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	197.13406605658	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	8377	False	NA	-3	True	AATAAA	-15	NA	108817516	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813387_108813442_108815102_108815164_108815247_108815400_108815651
ES.22416.32	chr3	-	2281	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	-15	784	-1	-442	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	6866	False	NA	-3	True	AATAAA	-15	NA	108819027	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.33	chr3	-	2306	7	FSM	ENSMUSG00000027881.15	ENSMUST00000199735.5	2508	7	-240	442	2	-442	multi-exon	FALSE	canonical	3	18	junction_3	184.380418941082	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTGTAGGTGTG	6869	False	NA	-3	True	AATAAA	-15	NA	108819024	108810904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815641_108815721_108818479
ES.22416.34	chr3	-	4699	5	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	6	-443	intron_retention	FALSE	canonical	3	21	junction_3	182.628550615724	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTTTGTAGGTGT	6856	False	NA	-4	True	AATAAA	-14	NA	108819037	108810905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815641_108815721_108818479
ES.22416.35	chr3	-	4310	6	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	179	-443	intron_retention	FALSE	canonical	3	28	junction_4	187.358479925516	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTTTGTAGGTGT	7288	False	NA	-4	True	AATAAA	-14	NA	108818605	108810905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.36	chr3	-	1991	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-11	1046	-11	408	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAGATTGTGCAGTAG	6839	False	NA	NA	False	ATTAAA	-19	NA	108819054	108811168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.37	chr3	-	5253	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	0	408	intron_retention	FALSE	canonical	3	28	junction_4	181.201545247274	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAGATTGTGCAGTAG	6850	False	NA	NA	False	ATTAAA	-19	NA	108819043	108811168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108817658
ES.22416.38	chr3	-	3870	6	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	-11	408	intron_retention	FALSE	canonical	3	21	junction_4	180.544066643022	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAGATTGTGCAGTAG	6839	False	NA	NA	False	ATTAAA	-19	NA	108819054	108811168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815641_108815721_108818479
ES.22416.39	chr3	-	2093	8	NNC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	-4	407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	177.279210194955	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTGAGATTGTGCAGTA	6863	False	NA	NA	False	ATTAAA	-18	NA	108819030	108811169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108812079_108812426_108812651_108813233_108813305_108813387_108813444_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.4	chr3	-	3579	7	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	5	485	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACCAAAGTGGTTAGTT	6855	False	NA	NA	False	AATAAA	-15	NA	108819038	108809635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.6	chr3	-	3120	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	-30	-64	-30	62	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTCAGCAGTTTTC	6820	False	NA	55	True	AAGAAA	-14	NA	108819073	108810058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ES.22416.7	chr3	-	3094	7	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	187.587683201454	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTGGTTTCCCCCCCCC	6852	False	NA	-2	True	AATAAA	-25	NA	108819041	108810115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815641_108815721_108817658_108817712_108818479
ES.22416.8	chr3	-	4916	7	NIC	ENSMUSG00000027881.15	novel	3050	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	28	junction_5	178.924332237588	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTGTTGGTTTCCCC	6884	False	NA	-7	True	AATAAA	-20	NA	108819009	108810120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ES.22416.9	chr3	-	5465	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	234	junction_3	120.261174117003	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGGTGTTGGTTTCCC	6864	False	NA	-8	True	AATAAA	-19	NA	108819029	108810121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108818479
ES.22417.1	chr3	+	171	1	Intergenic	novelGene_18452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCCTCAGCCAATGT	NA	False	NA	NA	False	NA	NA	NA	108836224	108836395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_108836200_108836400
ES.22418.1	chr3	-	5774	11	FSM	ENSMUSG00000040339.11	ENSMUST00000171143.2	5702	11	-74	2	-74	-2	multi-exon	FALSE	canonical	1	2	junction_4	2.6153393661244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTCTTAAGATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	108934997	108878314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_108882659_108886160_108886231_108886996_108887125_108887390_108887611_108888459_108888556_108892627_108892732_108895626_108895674_108899941_108900059_108904350_108904381_108910615_108910737_108934500
ES.22418.2	chr3	-	5059	12	NNC	ENSMUSG00000040339.11	novel	5702	11	NA	NA	-52	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.09892009982897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGATGCTCTTAAGATT	NA	False	NA	NA	False	AATAAA	-17	NA	108934975	108878317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_108880838_108881527_108882659_108886160_108886231_108886996_108887125_108887390_108887611_108888459_108888556_108892627_108892732_108895626_108895674_108899941_108900059_108904350_108904381_108910615_108910737_108934500
ES.22419.1	chr3	+	3456	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	-26	1	-26	-1	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTGTTTTCTAATTGT	4449	False	NA	NA	False	ATTAAA	-21	NA	109030438	109075772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
ES.22419.2	chr3	+	3254	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	0	177	0	-177	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTTCATTATGAAATTG	4475	False	NA	NA	False	GATAAA	-16	NA	109030464	109075596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
ES.22419.3	chr3	+	3356	11	NNC	ENSMUSG00000040322.11	novel	3431	10	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4.20119030752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTGTTTTCTAAT	4508	False	NA	NA	False	ATTAAA	-18	NA	109030497	109075769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641_109074227_109074264
ES.2242.1	chr1	+	4846	1	Genic_Genomic	ENSMUSG00000096929.8	novel	NA	NA	NA	NA	1317	2843	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGCCTTTACTTATCG	NA	False	NA	NA	False	NA	NA	NA	194707733	194712579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_194707700_194712600
ES.22420.1	chr3	+	4984	27	FSM	ENSMUSG00000033721.17	ENSMUST00000046864.14	5019	27	31	4	1	0	multi-exon	TRUE	canonical	0	0	junction_1	0.566573840871394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGTAATTCCTTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	109247999	109593010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_109248559_109331306_109331424_109402093_109402153_109404203_109404270_109408693_109408803_109410725_109410819_109413711_109413781_109416099_109416204_109418201_109418302_109423303_109423400_109426748_109426818_109428756_109428844_109433184_109433271_109434729_109434863_109435590_109435701_109470058_109470161_109470419_109470521_109481421_109481448_109485634_109485681_109535346_109535484_109554987_109555054_109559101_109559137_109564557_109564675_109565237_109565326_109571619_109571750_109590121_109590274_109590883
ES.22421.1	chr3	+	3688	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTTTTCACACTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	110157330	110161018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_110157300_110161000
ES.22421.2	chr3	+	1260	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	177	2255	177	-2255	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGGATCTGGGACTTC	NA	False	NA	NA	False	NA	NA	NA	110157507	110158767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_110157500_110158800
ES.22421.3	chr3	+	2383	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	399	910	399	-910	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCTTATTAAGAATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	110157729	110160112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_110157700_110160100
ES.22421.4	chr3	+	135	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	1572	1985	1572	-1985	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	110158902	110159037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_110158900_110159000
ES.22422.1	chr3	-	4887	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	7	-2444	2	4	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGGTCTATTCTTTTG	NA	False	NA	-1	True	AATAAA	-25	NA	110158307	110153420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110153400_110158300
ES.22422.2	chr3	-	3077	2	FSM	ENSMUSG00000049300.12	ENSMUST00000168412.3	3059	2	-18	0	-18	0	multi-exon	FALSE	canonical	3	26	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAACCTGGTCTATTCT	NA	False	NA	-5	True	AATAAA	-21	NA	110158332	110153424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110155172_110157002
ES.22422.3	chr3	-	1637	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	2	1412	2	1025	multi-exon	FALSE	canonical	3	26	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAATAGTCATTGTGAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110158307	110154839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110155172_110157002
ES.22422.4	chr3	-	2459	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	2	-11	2	11	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTATTTTGAAGGAAAA	NA	False	NA	-1	True	ATTAAA	-30	NA	110158312	110155853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110155900_110158300
ES.22422.5	chr3	-	2192	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	-2	260	-2	-260	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCTTTAGACGTTTTG	NA	False	NA	-10	True	AATAAA	-24	NA	110158316	110156124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110156100_110158300
ES.22422.6	chr3	-	2029	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	13	408	8	-408	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTTCTTAGTTCAGACA	NA	False	NA	NA	False	AATAAA	-14	NA	110158301	110156272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110156300_110158300
ES.22422.7	chr3	-	1560	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	-2	892	-2	-892	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTTTAAAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	110158316	110156756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110156800_110158300
ES.22422.8	chr3	-	1379	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	19	1052	14	-1052	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTCTTTTGTTT	NA	False	NA	NA	False	TATAAA	-11	NA	110158295	110156916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_110156900_110158300
ES.22423.1	chr3	-	156	1	Intergenic	novelGene_18453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	111283131	111282975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_111283000_111283100
ES.22424.1	chr3	-	179	1	Intergenic	novelGene_18454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCACCCACTGC	NA	False	NA	NA	False	NA	NA	NA	111372898	111372719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_111372700_111372900
ES.22425.1	chr3	+	226	1	Intergenic	novelGene_18455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGCAACAGAAATGAAAC	NA	False	NA	NA	False	NA	NA	NA	111639985	111640211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_111640000_111640200
ES.22426.1	chr3	-	165	1	Intergenic	novelGene_18456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTTACATTTTTT	NA	False	NA	NA	False	NA	NA	NA	111981540	111981375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_111981400_111981500
ES.22427.1	chr3	-	158	1	Intergenic	novelGene_18457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAATAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	112312888	112312730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_112312700_112312900
ES.22428.1	chr3	+	158	1	Intergenic	novelGene_18458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	112847821	112847979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_112847800_112848000
ES.22429.1	chr3	-	4722	1	Intergenic	novelGene_18459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGGATTTAAGTACACA	NA	False	NA	NA	False	NA	NA	NA	113392577	113387855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_113387900_113392600
ES.2243.1	chr1	-	3724	20	Fusion	ENSMUSG00000016493.14_ENSMUSG00000016481.16	novel	1263	12	NA	NA	0	-2147	multi-exon	FALSE	canonical	0	0	junction_1	113.179116737029	115	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTGTGCTTTGATAT	NA	False	NA	NA	False	AATAAA	-11	NA	194813869	194721280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_194722721_194724195_194724322_194744660_194744722_194746995_194747032_194750434_194750477_194757817_194757866_194759961_194760145_194764889_194765088_194765855_194765945_194767640_194767744_194768399_194768589_194781054_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.10	chr1	-	1517	10	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	99.3568204894751	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTATCAGGAGTGAG	NA	False	NA	53	True	NA	NA	NA	194813847	194780966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194781150_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813672
ES.2243.11	chr1	-	1625	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTGGTATCAGGAGTG	NA	False	NA	51	True	NA	NA	NA	194813885	194780968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.12	chr1	-	1232	8	NNC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.102184093391	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGTCTTGGTCATG	NA	False	NA	-4	True	NA	NA	NA	194813867	194781023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194781150_194793387_194793464_194796945_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.13	chr1	-	1345	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGGTGTGTGGTTCATA	NA	False	NA	-4	True	AATAAA	-16	NA	194813880	194786100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.14	chr1	-	1644	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	2	5	2	1	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTAGGTGTGTGGTTCA	NA	False	NA	-6	True	AATAAA	-14	NA	194813867	194786102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.15	chr1	-	1372	10	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.0049533617285	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813380	194786103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813279
ES.2243.16	chr1	-	1385	10	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	77.6737399417796	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813881	194786103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813767
ES.2243.17	chr1	-	878	9	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.4641196011656	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813870	194786103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194800054_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.18	chr1	-	1163	10	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	85.0517634687007	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813655	194786103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194800054_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.19	chr1	-	4230	9	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	121	junction_8	51.4605431374369	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATCTAGGTGTGTGGTT	NA	False	NA	-8	True	AATAAA	-12	NA	194813859	194786104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.2	chr1	-	4346	11	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	2	2084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.0509464871487	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCACATCATTTTTGC	NA	False	NA	NA	False	AATAAA	-31	NA	194813867	194777605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194777989_194778403_194781150_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.21	chr1	-	1155	1	ISM	ENSMUSG00000016481.16	ENSMUST00000193719.2	3859	3	4464	1	2392	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAGAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	194809378	194808223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_194808200_194809400
ES.2243.22	chr1	-	633	3	ISM	ENSMUSG00000016481.16	ENSMUST00000191775.2	913	6	13	14084	-12	328	5prime_fragment	FALSE	canonical	3	121	junction_2	87.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAACATGACTTTGTGGG	NA	False	NA	NA	False	ATTAAA	-11	NA	194813881	194811173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_194811555_194812137_194812318_194813809
ES.2243.3	chr1	-	4427	11	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	-3	2084	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	100.152683438838	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCACATCATTTTTGC	NA	False	NA	NA	False	AATAAA	-31	NA	194813634	194777605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194777989_194778403_194781150_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.4	chr1	-	4512	10	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	18	2084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.5099101709082	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCACATCATTTTTGC	NA	False	NA	NA	False	AATAAA	-31	NA	194813824	194777605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194777989_194778403_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.5	chr1	-	4232	9	NNC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2	2078	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	113.812276908073	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGTATGCACATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	194813867	194777611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194777989_194778401_194781150_194793387_194793471_194796951_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.6	chr1	-	4649	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2	2077	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGGTATGCACATCA	NA	False	NA	NA	False	AATAAA	-24	NA	194813867	194777612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.7	chr1	-	4210	10	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	-9	2069	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.1956977760655	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATTGAACAAAAGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	194813851	194777620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_194777989_194778403_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.2243.8	chr1	-	3682	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	-7	814	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTGATTGTGGT	NA	False	NA	NA	False	NA	NA	NA	194813849	194778875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ES.2243.9	chr1	-	3383	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2	811	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGCCTTGATTGT	NA	False	NA	NA	False	NA	NA	NA	194813867	194778878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
ES.22430.1	chr3	-	3855	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	33	0	33	0	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGATTTAGATTT	NA	False	NA	NA	False	AGTAAA	-14	NA	113423765	113398715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.10	chr3	-	3147	13	NIC	ENSMUSG00000027981.15	novel	1839	15	NA	NA	20	0	intron_retention	FALSE	canonical	3	86	junction_6	15.4063028227627	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423778	113399112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404953_113407406_113407566_113409011_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.11	chr3	-	2562	15	NNC	ENSMUSG00000027981.15	novel	1839	15	NA	NA	154	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	30.2031387745833	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCTAATTTTTCAT	NA	False	NA	-3	True	AATAAA	-14	NA	113423395	113399114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113422383
ES.22430.13	chr3	-	4182	15	NNC	ENSMUSG00000027981.15	novel	3888	15	NA	NA	186	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	34.381117266456	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCTAATTTTTCAT	NA	False	NA	-3	True	AATAAA	-14	NA	113423363	113399114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113422383
ES.22430.14	chr3	-	7371	13	NIC	ENSMUSG00000027981.15	novel	3888	15	NA	NA	7	-2	intron_retention	FALSE	canonical	3	32	junction_1	25.4376962181894	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCTAATTTTTCAT	NA	False	NA	-3	True	AATAAA	-14	NA	113423721	113399114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113418707_113421993
ES.22430.16	chr3	-	3520	14	NIC	ENSMUSG00000027981.15	novel	3888	15	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	32	junction_1	24.2989273389276	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACAGTGTCTAATTTT	NA	False	NA	-7	True	AATAAA	-10	NA	113423741	113399118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.2	chr3	-	3629	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	33	226	33	171	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATCTAGTTAATTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	113423765	113398941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.4	chr3	-	1901	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	16	-78	16	78	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTTTTACATTCGTA	NA	False	NA	77	True	AATAAA	-22	NA	113423782	113399034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.5	chr3	-	4776	13	ISM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	3543	326	3294	71	3prime_fragment	FALSE	canonical	3	32	junction_1	25.353610306139	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATACATTTTTTAC	NA	False	NA	70	True	AATAAA	-15	NA	113420255	113399041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587
ES.22430.6	chr3	-	3528	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	32	328	32	69	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTTATACATTTTTT	NA	False	NA	68	True	AATAAA	-13	NA	113423766	113399043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.7	chr3	-	5243	14	NNC	ENSMUSG00000027981.15	novel	1839	15	NA	NA	167	0	intron_retention	FALSE	canonical	1	1	junction_13	31.3340467416371	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423382	113399112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113422383
ES.22430.8	chr3	-	4458	14	FSM	ENSMUSG00000027981.15	ENSMUST00000153853.8	4679	14	-176	397	3	0	multi-exon	FALSE	canonical	3	86	junction_7	15.2408668936068	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423725	113399112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22430.9	chr3	-	3432	15	NNC	ENSMUSG00000027981.15	novel	3888	15	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.0467356132777	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423766	113399112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415507_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ES.22431.1	chr3	+	6051	66	NIC	ENSMUSG00000027966.21	novel	7667	67	NA	NA	-21	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	1.14716011583429	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTCAAGTTGTATTT	NA	False	NA	NA	False	AATAAA	-11	NA	113824167	114012964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888165_113888283_113888849_113888943_113890648_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199_113907254_113907366_113907412_113908582_113908637_113909134_113909180_113909379_113909434_113910118_113910164_113915038_113915093_113917404_113917450_113917823_113917878_113917956_113918002_113923022_113923077_113925207_113925316_113926784_113926839_113932048_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997_113958106_113958884_113958939_113960625_113960680_113961130_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866_114006936_114012329
ES.22432.1	chr3	-	178	1	Intergenic	novelGene_18460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114602865	114602687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_114602700_114602900
ES.22433.1	chr3	-	156	1	Intergenic	novelGene_18461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	114945227	114945071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_114945100_114945200
ES.22434.1	chr3	-	202	1	Intergenic	novelGene_18462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTTTGGGCCACAAACA	NA	False	NA	NA	False	NA	NA	NA	115087733	115087531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_115087500_115087700
ES.22435.1	chr3	+	195	1	Intergenic	novelGene_18463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115495520	115495715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_115495500_115495700
ES.22436.1	chr3	-	3053	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	-8	1	-8	-1	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTTTGTGAAGAAAACT	NA	False	NA	0	True	AATAAA	-17	NA	115508729	115504082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115506764_115508357
ES.22436.2	chr3	-	4445	1	NIC	ENSMUSG00000045092.9	novel	3046	2	NA	NA	189	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTCTTTTGTGAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	115508532	115504087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_115504100_115508500
ES.22436.3	chr3	-	2816	3	NNC	ENSMUSG00000045092.9	novel	3046	2	NA	NA	264	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTCTTTTGTGAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	115508457	115504087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115506764_115506873_115506914_115508357
ES.22436.4	chr3	-	2635	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	269	142	269	-142	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTTCAGTGAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	115508452	115504223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115506764_115508357
ES.22437.1	chr3	-	741	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	22.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	947	False	NA	-5	True	NA	NA	NA	115681740	115675229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115675488_115679862_115680030_115681424
ES.22437.2	chr3	-	734	3	NNC	ENSMUSG00000054426.12	novel	739	3	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGCTATGGTG	992	False	NA	-5	True	NA	NA	NA	115681695	115675229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115675488_115679862_115680068_115681424
ES.22437.3	chr3	-	587	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185424.2	433	2	-153	-1	-1	-1	multi-exon	FALSE	canonical	3	36	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGCCTTGGCTATGGT	933	False	NA	-6	True	NA	NA	NA	115681754	115675230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115675488_115681424
ES.22438.1	chr3	+	1377	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-46	245	-10	-1	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGTTTTATAATCTC	7712	False	NA	7	True	AATAAA	-17	NA	115681785	115722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ES.22438.10	chr3	+	1321	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	88.5183596775268	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGGTAGCA	7769	False	NA	NA	False	NA	NA	NA	115681842	115722968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722250_115722480
ES.22438.11	chr3	+	374	3	NNC	ENSMUSG00000033554.18	novel	1558	8	NA	NA	38557	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	136	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGTTTTATAATCTC	5236	False	NA	7	True	AATAAA	-17	NA	115720400	115722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115720450_115722157_115722227_115722480
ES.22438.2	chr3	+	1293	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	90.812220405626	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATAATCTCCTTT	7725	False	NA	11	True	AATAAA	-21	NA	115681798	115722740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722405_115722479
ES.22438.3	chr3	+	1590	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	-22	8	-4	-8	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTAGCAGTCAG	7736	False	NA	NA	False	NA	NA	NA	115681809	115722973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ES.22438.4	chr3	+	1239	8	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.826248843233	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGTTTTATAATCTC	7741	False	NA	7	True	AATAAA	-17	NA	115681814	115722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708816_115720345_115720450_115722157_115722405_115722479
ES.22438.5	chr3	+	1119	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	88.5183596775268	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTTTTATAATCTCCT	7741	False	NA	9	True	AATAAA	-19	NA	115681814	115722738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722250_115722480
ES.22438.6	chr3	+	2793	7	NIC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	262	junction_5	11.4515889242013	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGTTTTATAATCTC	7741	False	NA	7	True	AATAAA	-17	NA	115681814	115722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115720450_115722157
ES.22438.7	chr3	+	1730	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	119.132213842436	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGTTTTATAATCTC	7743	False	NA	7	True	AATAAA	-17	NA	115681816	115722736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115719360_115720345_115720450_115722157_115722405_115722479
ES.22438.9	chr3	+	1546	9	NNC	ENSMUSG00000033554.18	novel	1576	8	NA	NA	3	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	90.812220405626	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTCAAGTGTGGCAG	7751	False	NA	NA	False	AAAAAG	-38	NA	115681824	115723019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157_115722405_115722479
ES.22439.1	chr3	+	3954	1	FSM	ENSMUSG00000105645.2	ENSMUST00000199743.2	1165	1	-1054	-1735	-1054	1735	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACAATTATGTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	115735691	115739645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115735700_115739600
ES.22439.2	chr3	+	3301	1	FSM	ENSMUSG00000105645.2	ENSMUST00000199743.2	1165	1	-97	-2039	-97	2039	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAGTGAAGACATTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	115736648	115739949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115736600_115739900
ES.2244.1	chr1	-	176	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATTTAGA	NA	False	NA	NA	False	NA	NA	NA	195027900	195027724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_195027700_195027900
ES.22440.1	chr3	+	2132	1	Intergenic	novelGene_18464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	115767406	115769538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_115767400_115769500
ES.22441.1	chr3	+	3976	2	Antisense	novelGene_ENSMUSG00000054414.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9071	False	NA	NA	False	NA	NA	NA	115783305	115789392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_115784461_115786571
ES.22442.1	chr3	-	4072	2	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	-185	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTCATGACTCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	115736843	115732621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736195_115736344
ES.22442.10	chr3	-	6348	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	20	-2511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.8274930397787	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTGGTTCATTAAGGC	128	False	NA	NA	False	AATAAA	-14	NA	115801035	115735132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736192_115736340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783652_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.11	chr3	-	2938	7	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	17299	5475	2624	-5475	3prime_fragment	FALSE	canonical	3	100	junction_1	4.45969605341988	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTTTTTTTTAAAGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	115783756	115738096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660
ES.22442.12	chr3	-	2705	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	57	6258	57	-6258	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTAAGTTGATTTTGTT	165	False	NA	NA	False	AATAAA	-14	NA	115800998	115738879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.13	chr3	-	2188	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	-5	6837	-5	-6837	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTAGATTCTGTTAAT	103	False	NA	NA	False	NA	NA	NA	115801060	115739458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.14	chr3	-	2018	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	30	6972	30	-6972	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTTTGTAGCCTATT	138	False	NA	62	True	TATAAA	-19	NA	115801025	115739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.17	chr3	-	2024	8	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	1920	-7040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.2980275234878	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAATTGTCTTTGTGTAT	NA	False	NA	-6	True	NA	NA	NA	115784460	115739661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115774875_115775462_115778473_115778624_115783660_115783788_115784375
ES.22442.18	chr3	-	1862	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	34	7124	34	-7124	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTACCATCAAAGGTCA	142	False	NA	-90	True	AATATA	-14	NA	115801021	115739745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.19	chr3	-	1725	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	15	7280	15	-7280	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTCTGTTTTCTA	123	False	NA	NA	False	CATAAA	-18	NA	115801040	115739901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.2	chr3	-	8851	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_1	34.2832151784982	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTCATGACTCTTG	128	False	NA	NA	False	ATTAAA	-17	NA	115801035	115732621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736192_115736340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.20	chr3	-	6144	7	NIC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	35	8370	intron_retention	FALSE	canonical	3	92	junction_3	15.1510909031513	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAACAACCCAGCTGTCC	143	False	NA	NA	False	TTTAAA	-13	NA	115801020	115770135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.21	chr3	-	2348	9	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	35	7475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.2170625866029	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTGATATTGTTTAAT	143	False	NA	NA	False	AATAAA	-20	NA	115801020	115771030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115772429_115774875_115774957_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.22	chr3	-	1423	9	NNC	ENSMUSG00000054414.5	novel	359	4	NA	NA	32	7473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0093739016246	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCCTGATATTGTTTA	140	False	NA	NA	False	AATAAA	-18	NA	115801023	115771032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115771448_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.23	chr3	-	3272	1	NIC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	5502	899	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTTCTACACATTCA	NA	False	NA	NA	False	NA	NA	NA	115780878	115777606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_115777600_115780900
ES.22442.3	chr3	-	8985	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	35	0	35	0	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTCATGACTCTTG	143	False	NA	NA	False	ATTAAA	-17	NA	115801020	115732621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.4	chr3	-	2685	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.6233085889145	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGAGTCATGACTCT	128	False	NA	NA	False	ATTAAA	-15	NA	115801035	115732623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115733342_115740189_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115774875_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.5	chr3	-	6564	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	16	-2291	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.2832151784982	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTTCCTTTCCTAAT	124	False	NA	NA	False	AATAAA	-34	NA	115801039	115734912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736192_115736340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.6	chr3	-	7049	12	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	50	-2307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.6233085889145	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAGTCCATTTAATGCT	158	False	NA	NA	False	AATAAA	-18	NA	115801005	115734928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736192_115736340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115774875_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.7	chr3	-	6692	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	20	2308	20	-2308	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCAGTCCATTTAATGC	128	False	NA	NA	False	AATAAA	-17	NA	115801035	115734929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22442.8	chr3	-	6319	11	NNC	ENSMUSG00000054414.5	novel	9020	11	NA	NA	47	-2391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.2433420516213	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCAGTGTTCTTGACT	155	False	NA	NA	False	AATAAA	-21	NA	115801008	115735012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_115736192_115736340_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115800482_115800585_115800783
ES.22442.9	chr3	-	6504	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	20	2496	20	-2496	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCCTTTAGATGTACAA	128	False	NA	NA	False	AATAAA	-29	NA	115801035	115735117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ES.22443.1	chr3	+	3010	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	-19	9	-19	-9	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGAGCGGGTGCTCT	0	True	NA	14	True	AATAAA	-25	NA	115801091	115822657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.10	chr3	+	2500	4	NIC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	-67	-73	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.4960314960472	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTTTGTCCACATTT	293	False	NA	25	True	ATTAAA	-13	NA	115801409	115822536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_115801532_115804270_115804346_115817655_115818084_115820661
ES.22443.11	chr3	+	2291	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	21	528	21	-528	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACTGTATTGCACAAA	73	False	NA	NA	False	ATTAAA	-24	NA	115801889	115822081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.12	chr3	+	2821	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	71	-52	71	-5	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCGGGTGCTCTGGTG	123	False	NA	18	True	AATAAA	-29	NA	115801939	115822661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.13	chr3	+	2648	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	104	88	104	-88	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTATGTCAGTTACAT	156	False	NA	10	True	AATATA	-18	NA	115801972	115822521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.3	chr3	+	2389	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	1	610	1	-553	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAGGCTACCTTGTGA	20	False	NA	NA	False	AATAAA	-31	NA	115801111	115822056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.4	chr3	+	2950	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	-741	631	1	-631	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAACTTCTGGAAGAA	11	False	NA	NA	False	AATAAA	-8	NA	115801127	115821978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.5	chr3	+	2922	6	NNC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	1	-88	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.9044397739075	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTATGTCAGTTACAT	18	False	NA	10	True	AATATA	-18	NA	115801134	115822521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115801532_115804270_115804346_115804485_115804577_115817655_115818084_115818973_115819045_115820661
ES.22443.6	chr3	+	2439	6	NNC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	2	-570	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.9044397739075	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCTTTATTATTAAAG	19	False	NA	NA	False	AATAAA	-14	NA	115801135	115822039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115801532_115804270_115804346_115804485_115804577_115817655_115818084_115818973_115819045_115820661
ES.22443.7	chr3	+	2448	6	NNC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	3	-631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.0451474390509	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAACTTCTGGAAGAA	20	False	NA	NA	False	AATAAA	-8	NA	115801136	115821978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_115801532_115802024_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22443.8	chr3	+	2882	4	NIC	ENSMUSG00000027963.15	novel	3000	5	NA	NA	17	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.4960314960472	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGAGCGGGTGCTCTGG	34	False	NA	16	True	AATAAA	-27	NA	115801150	115822659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_115801532_115804270_115804346_115817655_115818084_115820661
ES.22443.9	chr3	+	2783	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	72	145	11	-88	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTATGTCAGTTACAT	66	False	NA	10	True	AATATA	-18	NA	115801182	115822521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ES.22444.1	chr3	-	4506	16	FSM	ENSMUSG00000033502.16	ENSMUST00000090464.7	4485	16	-21	0	-21	0	multi-exon	FALSE	canonical	2	9	junction_7	3.61232458243842	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGCATTCATTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	116217702	116066201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116144854_116144922_116160275_116160356_116186470_116186564_116198191_116198268_116216215_116216307_116217085
ES.22444.2	chr3	-	3422	9	NNC	ENSMUSG00000033502.16	novel	4292	14	NA	NA	75839	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.64441095243782	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGGGCATTCATTAGT	6321	False	NA	NA	False	AATAAA	-20	NA	116123298	116066202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116123206
ES.22444.3	chr3	-	3421	9	NNC	ENSMUSG00000033502.16	novel	4292	14	NA	NA	75833	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.64441095243782	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGGGCATTCATTAGT	6315	False	NA	NA	False	AATAAA	-20	NA	116123304	116066202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116123213
ES.22444.4	chr3	-	4287	1	NIC	ENSMUSG00000033502.16	novel	4485	16	NA	NA	-11	-15603	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-9	NA	116217646	116213359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116213400_116217600
ES.22445.1	chr3	-	1692	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	-41	-57	-41	57	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTGTATTAGTAT	NA	False	NA	57	True	AATAAA	-28	NA	116301898	116282554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
ES.22445.10	chr3	-	1553	12	NNC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	3	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	121.244306333047	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGAGCTGCTGCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	116301711	116282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116293800_116293910_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
ES.22445.11	chr3	-	4136	5	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-5494	-4	intron_retention	FALSE	canonical	3	268	junction_4	22.0113607030551	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGAGCTGCTGCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	116295108	116282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116286631_116287827_116289284_116291364_116293194_116293337_116294760
ES.22445.12	chr3	-	5680	8	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	17	-4	intron_retention	FALSE	canonical	3	261	junction_4	34.0323975298928	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGAGCTGCTGCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	116301697	116282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116286631_116287827_116289284_116289344_116291238_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
ES.22445.13	chr3	-	5142	2	NIC	ENSMUSG00000000339.15	novel	712	7	NA	NA	-4401	757	intron_retention	FALSE	canonical	3	283	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116294015	116287042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116291364_116293194
ES.22445.2	chr3	-	1509	11	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-33	47	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	93.6707531730155	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATCTGTAATGTGTGT	NA	False	NA	47	True	AATAAA	-18	NA	116301747	116282564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298096_116300483_116300628_116301399_116301501_116301593
ES.22445.3	chr3	-	8925	3	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-5177	0	intron_retention	FALSE	canonical	3	268	junction_2	7.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	0	True	AATAAA	-20	NA	116294791	116282611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116291364_116293194_116293337_116294760
ES.22445.5	chr3	-	7068	8	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	276	junction_1	30.5420419509013	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301741	116282614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116286631_116287827_116289284_116289344_116291238_116291364_116293194_116298118_116300483_116300628_116301399_116301501_116301593
ES.22445.6	chr3	-	1213	9	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	135.148991857135	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301708	116282614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116300483_116300628_116301399_116301501_116301593
ES.22445.8	chr3	-	1191	8	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	-16	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	151.092078966869	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGAGCTGCTGCTTTT	NA	False	NA	-3	True	AATAAA	-17	NA	116301730	116282614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116300483_116300643_116301399_116301501_116301593
ES.22445.9	chr3	-	1432	11	NIC	ENSMUSG00000000339.15	novel	1594	11	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	118.178001336966	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGAGCTGCTGCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	116301706	116282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298096_116300483_116300643_116301399_116301501_116301593
ES.22446.1	chr3	+	179	1	Intergenic	novelGene_18465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAATCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	116302537	116302716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116302500_116302700
ES.22447.1	chr3	+	3122	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATGCCTTCATAGT	NA	False	NA	9	True	AATAAA	-18	NA	116306696	116343629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.10	chr3	+	4310	10	ISM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	43	615	-6	-615	intron_retention	FALSE	canonical	3	173	junction_7	22.5509026399509	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	29	True	NA	NA	NA	116306761	116343015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942
ES.22447.11	chr3	+	1490	1	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-5	-20310	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCCTGGCTTTGGCCCT	NA	False	NA	NA	False	CATAAA	-40	NA	116306762	116308252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306800_116308300
ES.22447.12	chr3	+	2640	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	-540	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	68.4805099784864	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTATTTTGAAATCTAG	NA	False	NA	104	True	NA	NA	NA	116306763	116343090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116313885_116314010_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.13	chr3	+	2507	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	2	-619	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	66.6374009838059	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAGAAAGAAAGAAAGA	NA	False	NA	25	True	NA	NA	NA	116306769	116343011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.14	chr3	+	2780	7	ISM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	21674	18	14416	-18	3prime_fragment	FALSE	canonical	3	173	junction_3	27.4190728427413	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCCACATTATCATACT	NA	False	NA	-8	True	AATAAA	-1	NA	116328392	116343612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.2	chr3	+	3317	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	-13	-3	-13	3	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTTCATAGTAGTT	NA	False	NA	13	True	AATAAA	-22	NA	116306705	116343633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.3	chr3	+	3180	12	NNC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	65.0628431112491	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTTCATAGTAGTT	NA	False	NA	13	True	AATAAA	-22	NA	116306714	116343633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681_116342991_116343118
ES.22447.4	chr3	+	2565	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	-4	-540	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTATTTTGAAATCTAG	NA	False	NA	104	True	NA	NA	NA	116306714	116343090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.5	chr3	+	2761	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	0	540	0	-540	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTATTTTGAAATCTAG	NA	False	NA	104	True	NA	NA	NA	116306718	116343090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.6	chr3	+	3222	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	67.4231157928042	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATACTTTGTATGCCTTC	NA	False	NA	4	True	AATAAA	-13	NA	116306719	116343624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116341681
ES.22447.7	chr3	+	2074	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	1	1226	1	-1226	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTAGCATTCTTGAAA	NA	False	NA	NA	False	TATAAA	-13	NA	116306719	116342404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.8	chr3	+	3174	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	66.6374009838059	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTATGCCTTCATAG	NA	False	NA	8	True	AATAAA	-17	NA	116306719	116343628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22447.9	chr3	+	3221	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	68.4805099784864	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATGCCTTCATAGT	NA	False	NA	9	True	AATAAA	-18	NA	116306721	116343629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116306841_116313885_116314010_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ES.22448.1	chr3	-	179	1	Intergenic	novelGene_18466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	116344264	116344085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116344100_116344300
ES.22449.1	chr3	-	945	1	FSM	ENSMUSG00000034437.9	ENSMUST00000075650.7	492	1	-115	-338	-115	338	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTATGGGAGGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	116355190	116354245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116354200_116355200
ES.2245.1	chr10	+	585	4	FSM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	626	1406	139	-1406	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACATTTTTTGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	3316682	3413569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3316970_3373493_3373578_3375733_3375767_3413388
ES.22450.1	chr3	+	156	1	Antisense	novelGene_ENSMUSG00000106025.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTGAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	116367458	116367614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116367500_116367600
ES.22451.1	chr3	+	172	1	Intergenic	novelGene_18467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGACTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	116373875	116374047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116373900_116374000
ES.22452.1	chr3	+	176	1	Intergenic	novelGene_18468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	116374063	116374239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116374100_116374200
ES.22453.1	chr3	+	3515	14	NNC	ENSMUSG00000027959.15	novel	1894	14	NA	NA	-62	1469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.3891041731111	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCGCATTGTTCA	NA	False	NA	16	True	NA	NA	NA	116388568	116416720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116398845_116398926_116399313_116399419_116400971_116401173_116401621_116401744_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ES.22453.10	chr3	+	662	4	ISM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	20	15594	-1	767	5prime_fragment	FALSE	canonical	3	61	junction_2	7.25718035235908	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTATTTCTTATTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	116388650	116399657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313
ES.22453.11	chr3	+	2108	16	NIC	ENSMUSG00000027959.15	novel	2404	17	NA	NA	-1	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	18.5136586215571	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGAGTAAATGGTATTT	NA	False	NA	NA	False	NA	NA	NA	116388650	116422614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ES.22453.12	chr3	+	2138	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	28	-272	0	272	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCGTTCCAGGTTCTT	NA	False	NA	2	True	NA	NA	NA	116388658	116415523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ES.22453.14	chr3	+	3943	19	NNC	ENSMUSG00000027959.15	novel	4340	18	NA	NA	0	55175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	20.3482792671961	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTAAGGTAAGGAGTAT	NA	False	NA	NA	False	AAGAAA	-10	NA	116388658	116479828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356_116422947_116423262_116424620_116479794
ES.22453.16	chr3	+	4242	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	3	-1841	1	-16	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCGGTTGACCTACACA	NA	False	NA	18	True	AATAAA	-28	NA	116388659	116424637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ES.22453.17	chr3	+	2628	19	Fusion	ENSMUSG00000027959.15_ENSMUSG00000105339.2	novel	4340	18	NA	NA	1	429	multi-exon	FALSE	canonical	0	0	junction_18	20.226190086917	94	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGGTATTTTTATTC	NA	False	NA	NA	False	TATAAA	-13	NA	116388659	116426287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356_116422456_116424678_116424745_116425785
ES.22453.18	chr3	+	2904	7	ISM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	29	9087	1	7274	5prime_fragment	FALSE	canonical	3	55	junction_4	7.91622805802528	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCATTTCTTTTTGTGCT	NA	False	NA	NA	False	NA	NA	NA	116388659	116406164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912
ES.22453.19	chr3	+	3116	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	5	-717	1	600	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGACAGTGTATTTACAT	NA	False	NA	NA	False	AGTAAA	-36	NA	116388661	116423513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ES.22453.2	chr3	+	3421	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	-58	-1469	-58	1469	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCGCATTGTTCA	NA	False	NA	16	True	NA	NA	NA	116388572	116416720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ES.22453.20	chr3	+	6436	14	NIC	ENSMUSG00000027959.15	novel	2404	17	NA	NA	1	656	intron_retention	FALSE	canonical	3	39	junction_13	10.1538461538462	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTTGCTTTCTTTTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	116388661	116421866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721
ES.22453.21	chr3	+	2272	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	7	125	3	-110	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATTGTATCAGATTCT	NA	False	NA	NA	False	AAAAAG	-3	NA	116388663	116422671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ES.22453.24	chr3	+	4906	4	NIC	ENSMUSG00000027959.15	novel	1894	14	NA	NA	2801	1465	intron_retention	FALSE	canonical	3	42	junction_1	8.83176086632785	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCCTGTCTCCGCATTG	NA	False	NA	12	True	NA	NA	NA	116409785	116416716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116412100_116412208_116412982_116413706_116413841_116415031
ES.22453.25	chr3	+	1290	4	ISM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	23842	-774	-2635	774	3prime_fragment	FALSE	canonical	3	43	junction_1	8.37987005998436	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGCATACATGTGT	NA	False	NA	NA	False	NA	NA	NA	116412472	116416025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116412553_116412899_116412982_116413706_116413841_116415031
ES.22453.26	chr3	+	2320	6	NNC	ENSMUSG00000027959.15	novel	1765	3	NA	NA	-1166	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9197989937059	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTAGGAAATCAAGCAT	NA	False	NA	0	True	AATAAA	-10	NA	116413941	116424619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116413992_116415031_116415158_116420721_116420817_116422166_116422262_116422356_116422954_116423262
ES.22453.27	chr3	+	1545	4	NNC	ENSMUSG00000027959.15	novel	539	2	NA	NA	-1158	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.3847763108502	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCAAGAAGCATGTTTA	NA	False	NA	11	True	AATAAA	-22	NA	116413949	116424581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116413992_116415031_116415158_116420721_116420780_116423262
ES.22453.28	chr3	+	2978	1	Genic_Genomic	ENSMUSG00000027959.15_ENSMUSG00000105339.2	novel	NA	NA	NA	NA	2874	-435	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGGTTTTCTACAATTT	NA	False	NA	NA	False	AATAAA	-27	NA	116422445	116425423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_116422400_116425400
ES.22453.29	chr3	+	3265	1	Intergenic	novelGene_18471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCTCCTTAATTATCT	NA	False	NA	NA	False	NA	NA	NA	116451490	116454755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116451500_116454800
ES.22453.3	chr3	+	3965	18	NNC	ENSMUSG00000027959.15	novel	4340	18	NA	NA	-53	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8165544223781	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCATGTTTAGGAAAT	NA	False	NA	17	True	AATAAA	-28	NA	116388577	116424587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116397113_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412205_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356_116422954_116423262
ES.22453.4	chr3	+	4076	16	NNC	ENSMUSG00000027959.15	novel	2404	17	NA	NA	-52	-118	intron_retention	FALSE	canonical	0	0	junction_8	17.7120172638679	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCACTGGATTGTAT	NA	False	NA	NA	False	AGTAAA	-38	NA	116388578	116422663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116408124_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116422262_116422356
ES.22453.5	chr3	+	5680	16	NIC	ENSMUSG00000027959.15	novel	4340	18	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	30	junction_15	11.9044342812061	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTTCGTTATTTTTAT	NA	False	NA	33	True	AATAAA	-43	NA	116388586	116424652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116422262_116422356
ES.22453.6	chr3	+	3958	18	NNC	ENSMUSG00000027959.15	novel	4340	18	NA	NA	-19	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.6627381325518	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTTAGGAAATCAAGCA	NA	False	NA	-1	True	AATAAA	-9	NA	116388611	116424618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356_116422945_116423257
ES.22453.7	chr3	+	1902	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	-10	2	-10	-2	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGATGTCTGCAGCAT	NA	False	NA	NA	False	TATAAA	-20	NA	116388620	116415249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ES.22453.9	chr3	+	3244	14	NNC	ENSMUSG00000027959.15	novel	1894	14	NA	NA	-2	992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.9123440957882	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAGTTTACTAAGAGTA	NA	False	NA	NA	False	AGTAAA	-14	NA	116388649	116416243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116408124_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ES.22454.1	chr3	-	2204	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19722	-359	-5	359	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAGATAAAATTACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	116388514	116374382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.10	chr3	-	1638	11	FSM	ENSMUSG00000033439.13	ENSMUST00000184963.8	1616	11	-19	-3	5	2	multi-exon	FALSE	canonical	3	22	junction_2	31.2251501197352	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116388504	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.13	chr3	-	1099	5	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	4762	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.7350579819609	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116383555	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376374_116378844_116378916_116383139_116383247_116383382
ES.22454.14	chr3	-	3996	10	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_4	37.4373550822645	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388509	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.15	chr3	-	2725	11	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_6	52.6368692078091	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388518	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116383247_116383382_116383453_116383535_116383761_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.16	chr3	-	4116	10	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_8	39.1316234089168	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388502	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386100_116386160_116388287
ES.22454.18	chr3	-	4168	10	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_4	45.3719878774406	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388508	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.19	chr3	-	1562	11	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	43.3178946856839	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388546	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.2	chr3	-	1873	9	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	4247	352	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	39.5883110905227	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTCACCCCAGATAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	116384070	116374389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053
ES.22454.20	chr3	-	4279	11	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_7	46.1753180822829	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388525	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116384206_116385841_116385909_116386112_116386160_116388287
ES.22454.21	chr3	-	5143	9	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	22	junction_2	34.7506744538865	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388517	116374742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.22	chr3	-	4422	9	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	-346	0	intron_retention	FALSE	canonical	2	6	junction_5	39.1565368106016	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388882	116374743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116385909_116386112_116386160_116388287
ES.22454.23	chr3	-	3859	10	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-6	0	intron_retention	FALSE	canonical	2	4	junction_7	46.1064254647419	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388515	116374743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383942_116384053_116385909_116386112_116386160_116388287
ES.22454.24	chr3	-	5397	7	NNC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_4	45.2796863946737	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388525	116374743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116382827_116385240_116385909_116386112_116386160_116388287
ES.22454.25	chr3	-	5777	10	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	5	-1	intron_retention	FALSE	canonical	2	4	junction_7	48.760184121428	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAATCTGAGTGTGAGG	NA	False	NA	NA	False	AATAAA	-20	NA	116388504	116374744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116385909_116386112_116386160_116388287
ES.22454.26	chr3	-	3486	10	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	2	junction_4	46.3872587870611	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAATCTGAGTGTGAGG	NA	False	NA	NA	False	AATAAA	-20	NA	116388461	116374744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379473_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116385909_116386112_116386160_116388287
ES.22454.28	chr3	-	4107	10	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_3	56.7567910767807	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCAATCTGAGTGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	116388476	116374745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116378920_116379403_116379477_116379777_116379857_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116388287
ES.22454.29	chr3	-	3125	9	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	11	-6	intron_retention	FALSE	canonical	3	100	junction_2	11.346117177255	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGATCAATCTGAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	116388525	116374749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116383247_116383382_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.3	chr3	-	5341	9	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	-2	4	intron_retention	FALSE	canonical	3	87	junction_5	15.4105280571433	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTGAGGCTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	116388511	116374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.30	chr3	-	3879	10	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	2	12	intron_retention	FALSE	canonical	3	87	junction_6	13.6037395004117	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGTAGTCAAAGTATTC	NA	False	NA	NA	False	TTTAAA	-40	NA	116388507	116374972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.31	chr3	-	3754	10	NIC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	7	7	intron_retention	FALSE	canonical	2	6	junction_4	37.4373550822645	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCACCAAGTAGTCAAAG	NA	False	NA	NA	False	TTTAAA	-35	NA	116388502	116374977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.32	chr3	-	1621	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19705	241	5	2	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTCACCAAGTAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	116388531	116374982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.33	chr3	-	1389	11	NNC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.4976403868789	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTCACCAAGTAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	116388502	116374982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376374_116378844_116378916_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ES.22454.34	chr3	-	3150	10	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	11	2	intron_retention	FALSE	canonical	2	6	junction_5	45.3308822866806	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTCACCAAGTAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	116388474	116374982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382174_116383139_116383247_116383382_116383453_116383878_116385909_116386112_116386160_116388287
ES.22454.4	chr3	-	2674	12	NNC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	-2743	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.6275499304904	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116391279	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287_116389243_116391180
ES.22454.5	chr3	-	7600	8	NNC	ENSMUSG00000033439.13	novel	1723	11	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_7	43.7684072064286	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116388504	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116378920_116379403_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386156_116388287
ES.22454.6	chr3	-	1813	10	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	38.6583643705016	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116388527	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116388287
ES.22454.8	chr3	-	4047	9	NIC	ENSMUSG00000033439.13	novel	1616	11	NA	NA	-25	2	intron_retention	FALSE	canonical	3	22	junction_2	33.8099005470291	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116388359	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383942_116385841_116385909_116386112
ES.22454.9	chr3	-	1990	12	NNC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.8129261163276	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTGTGAGGCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	116388508	116374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384056_116384206_116385841_116385909_116386112_116386160_116388287
ES.22455.1	chr3	-	183	1	Intergenic	novelGene_18469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAGAAGTTAAAATATT	NA	False	NA	NA	False	NA	NA	NA	116396508	116396325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116396300_116396500
ES.22456.1	chr3	-	1862	4	Genic_Genomic	ENSMUSG00000033439.13	novel	3402	12	NA	NA	72	7111	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAATGGTACAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	116408164	116400077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_116401141_116402028_116402100_116403914_116404031_116407552
ES.22457.1	chr3	-	2794	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	-12	0	-12	0	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456338	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.10	chr3	-	8012	5	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-2025	-5	intron_retention	FALSE	canonical	0	0	junction_1	403.37288890058	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116441406	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116430033_116434035_116434108_116434895_116435010_116435358_116435578_116439014
ES.22457.11	chr3	-	3398	7	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	282	-5	intron_retention	FALSE	canonical	0	0	junction_6	436.254290013927	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116439099	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116427535_116428551_116428650_116429950_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439010
ES.22457.12	chr3	-	6280	10	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	8	-5	intron_retention	FALSE	canonical	3	879	junction_1	58.1110048862424	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116456251	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.13	chr3	-	3216	13	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_11	356.524221944784	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116456263	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116445843_116446346_116456043
ES.22457.14	chr3	-	3571	4	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	24402	6	-1802	-6	3prime_fragment	FALSE	canonical	3	876	junction_3	26.6624996744283	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTCTTGATCTGTG	NA	False	NA	-7	True	AATAAA	-30	NA	116431924	116424818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926
ES.22457.16	chr3	-	2722	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_2	370.012619842858	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGTCTTGATCTGT	NA	False	NA	-8	True	AATAAA	-29	NA	116456263	116424819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428547_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441424_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.18	chr3	-	2485	11	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	8	-17	intron_retention	FALSE	canonical	0	0	junction_7	375.489134330143	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTTAAAAAGGT	NA	False	NA	-18	True	AATAAA	-19	NA	116456251	116424829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439089_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.19	chr3	-	2672	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	2	-17	intron_retention	FALSE	canonical	2	17	junction_3	274.098974704183	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTTAAAAAGGT	NA	False	NA	-18	True	AATAAA	-19	NA	116456257	116424829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429950_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.2	chr3	-	4977	10	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	876	junction_1	58.4427545171816	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456263	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.20	chr3	-	3898	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-5	-19	intron_retention	FALSE	canonical	1	1	junction_11	277.569141114738	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTCTTTTTAAAAAG	NA	False	NA	-20	True	AATAAA	-17	NA	116456264	116424831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116446346_116456043
ES.22457.21	chr3	-	5202	10	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	10	-21	intron_retention	FALSE	canonical	3	903	junction_4	52.3275533491312	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTTCTTTTTAAAA	NA	False	NA	-22	True	AATAAA	-15	NA	116456249	116424833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116427535_116428551_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.22	chr3	-	2598	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-23	intron_retention	FALSE	canonical	0	0	junction_1	278.884821748429	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTTTTTCTTTTTAA	NA	False	NA	-24	True	AATAAA	-13	NA	116456263	116424835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426032_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.23	chr3	-	2725	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-25	-23	intron_retention	FALSE	non_canonical	0	0	junction_9	276.744982111631	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTTTTTCTTTTTAA	NA	False	NA	-24	True	AATAAA	-13	NA	116456284	116424835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441567_116442167_116442231_116445052_116445149_116456043
ES.22457.24	chr3	-	3915	11	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	22	-23	intron_retention	FALSE	canonical	0	0	junction_6	290.785075270379	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTTTTTCTTTTTAA	NA	False	NA	-24	True	AATAAA	-13	NA	116456237	116424835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439010_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.26	chr3	-	2617	13	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-50	intron_retention	FALSE	non_canonical	0	0	junction_1	267.037086479679	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCTGTTAATAAAATTAA	NA	False	NA	-51	True	ATTAAA	-19	NA	116456263	116424862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116425009_116425060_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.27	chr3	-	2619	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	35	128	-32	-128	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTGTGGTTACTG	NA	False	NA	1	True	CATAAA	-25	NA	116456291	116424940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.29	chr3	-	3828	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-132	intron_retention	FALSE	canonical	3	876	junction_2	55.7782215564462	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATCTTGTGTGTGGTT	NA	False	NA	-3	True	CATAAA	-21	NA	116456263	116424944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.3	chr3	-	3978	19	Fusion	ENSMUSG00000089911.5_ENSMUSG00000027957.14	novel	2782	12	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_11	400.013178795245	911	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	2222	False	NA	-1	True	AATAAA	-36	NA	116505873	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116466938_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.30	chr3	-	2588	6	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	20469	138	3524	-138	intron_retention	FALSE	canonical	3	876	junction_3	34.9708449997995	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTTTCATCTTGTGT	NA	False	NA	-9	True	CATAAA	-15	NA	116435857	116424950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895
ES.22457.31	chr3	-	1926	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	15	841	15	589	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCTGCCATTTC	NA	False	NA	-9	True	ATTAAA	-12	NA	116456311	116425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.32	chr3	-	1764	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	8	589	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	277.826570553979	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCTGCCATTTC	NA	False	NA	-9	True	ATTAAA	-12	NA	116456251	116425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427433_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.33	chr3	-	5411	10	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	5	589	intron_retention	FALSE	canonical	3	876	junction_2	58.5491246732178	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCTGCCATTTC	NA	False	NA	-9	True	ATTAAA	-12	NA	116456254	116425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.34	chr3	-	1712	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-2	589	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	274.850213752873	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCTGCCATTTC	NA	False	NA	-9	True	ATTAAA	-12	NA	116456261	116425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.35	chr3	-	1769	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	9	589	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	280.686586783195	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCTGCCATTTC	NA	False	NA	-9	True	ATTAAA	-12	NA	116456250	116425653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116456043
ES.22457.36	chr3	-	2066	14	Fusion	ENSMUSG00000089911.5_ENSMUSG00000027957.14	novel	2782	12	NA	NA	12	588	multi-exon	FALSE	canonical	0	0	junction_13	381.163696216743	907	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCGTCTCTGCCATTT	2246	False	NA	-10	True	ATTAAA	-11	NA	116505849	116425654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116471511_116471631_116474753_116474926_116505731
ES.22457.37	chr3	-	1995	13	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	588	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	345.555671668433	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCGTCTCTGCCATTT	NA	False	NA	-10	True	ATTAAA	-11	NA	116456263	116425654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116444222_116444341_116445052_116445149_116456043
ES.22457.39	chr3	-	4177	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	587	intron_retention	FALSE	canonical	3	876	junction_3	59.928707645001	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTCCGTCTCTGCCATT	NA	False	NA	-11	True	ATTAAA	-10	NA	116456263	116425655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.4	chr3	-	2556	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	57	junction_1	274.850213752873	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456264	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.40	chr3	-	227	1	FSM	ENSMUSG00000089911.5	ENSMUST00000196274.2	3880	1	2876	777	2876	-777	mono-exon	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAATGAAAAAAT	1490	False	NA	NA	False	ACTAAA	-36	NA	116427246	116427019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116427000_116427200
ES.22457.41	chr3	-	170	1	Intergenic	novelGene_18470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCCCAAAATGA	NA	False	NA	NA	False	NA	NA	NA	116441039	116440869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116440900_116441000
ES.22457.42	chr3	-	8878	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	401	-3554	8	3554	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTATTATTAGAATGT	2197	False	NA	NA	False	NA	NA	NA	116505898	116459564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.43	chr3	-	7478	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	440	-2193	2	2193	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATGACTATGTGT	2236	False	NA	NA	False	AATAAA	-18	NA	116505859	116460925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.44	chr3	-	5123	7	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	8	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	65.8088562091422	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGTTCCTCAGGATCT	2197	False	NA	-5	True	AATAAA	-24	NA	116505898	116463114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116505731
ES.22457.45	chr3	-	5188	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	61.1034586014673	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTAGTTCCTCAGGAT	2269	False	NA	-7	True	AATAAA	-22	NA	116505826	116463116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488218_116505731
ES.22457.46	chr3	-	5455	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	272	-2	-121	2	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTAGTTCCTCAGGAT	2068	False	NA	-7	True	AATAAA	-22	NA	116506027	116463116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.47	chr3	-	5487	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	73.2289858935654	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGTAGTTCCTCAGGA	2198	False	NA	-8	True	AATAAA	-21	NA	116505897	116463117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469674_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.49	chr3	-	5124	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	371	230	-22	-230	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTATTTTTACCTGTG	2167	False	NA	0	True	CATAAA	-28	NA	116505928	116463348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.5	chr3	-	4013	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-21	0	intron_retention	FALSE	canonical	3	879	junction_1	55.3736399381511	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456280	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.51	chr3	-	5213	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	7	-249	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	73.2289858935654	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTTCTATATTTCCA	2222	False	NA	-19	True	CATAAA	-9	NA	116505873	116463367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469674_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.52	chr3	-	4095	2	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-1523	-249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTTCTATATTTCCA	NA	False	NA	-19	True	CATAAA	-9	NA	116471600	116463367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467374_116471511
ES.22457.54	chr3	-	2969	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-6	-250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.3066756804389	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTTTTCTATATTTCC	2183	False	NA	-20	True	CATAAA	-8	NA	116505912	116463368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116465315_116466059_116466128_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.55	chr3	-	4878	7	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-2	-251	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	65.8088562091422	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAGTTTTCTATATTTC	2187	False	NA	-21	True	CATAAA	-7	NA	116505908	116463369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116505731
ES.22457.56	chr3	-	4810	7	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	9	-252	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	79.9967013208809	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATAGTTTTCTATATTT	2198	False	NA	-22	True	CATAAA	-6	NA	116505897	116463370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480766_116480834_116480919_116481075_116505731
ES.22457.57	chr3	-	5006	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-8	-252	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	63.0620038258428	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATAGTTTTCTATATTT	2207	False	NA	-22	True	CATAAA	-6	NA	116505888	116463370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480766_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.58	chr3	-	4979	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	7	-254	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	61.1034586014673	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATATAGTTTTCTATAT	2222	False	NA	-24	True	CATAAA	-4	NA	116505873	116463372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488218_116505731
ES.22457.59	chr3	-	4743	6	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-6	-317	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	67.3456754365119	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTGGTACCATTATTA	2183	False	NA	0	True	GATAAA	-12	NA	116505912	116463435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116488078_116488284_116505731
ES.22457.6	chr3	-	2607	12	NNC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_2	277.826570553979	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456253	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116426130_116427370_116427433_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.60	chr3	-	5092	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	290	343	-103	-343	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGATAAATTTCT	2086	False	NA	-26	True	TATAAA	-20	NA	116506009	116463461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.62	chr3	-	4880	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	378	467	-15	-467	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTCTGTATTTCATT	2174	False	NA	NA	False	TTTAAA	-34	NA	116505921	116463585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.63	chr3	-	5027	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	7	-467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.4468345131361	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTCTGTATTTCATT	2222	False	NA	NA	False	TTTAAA	-34	NA	116505873	116463585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469706_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.64	chr3	-	4880	8	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-33	-470	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	63.6989090990432	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATATGTCTGTATTTC	2571	False	NA	NA	False	TTTAAA	-31	NA	116505524	116463588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505331
ES.22457.65	chr3	-	4627	7	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	3	-471	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	65.8088562091422	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATATATGTCTGTATTT	2218	False	NA	NA	False	TTTAAA	-30	NA	116505877	116463589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116505731
ES.22457.66	chr3	-	5018	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	-6	-474	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.7282196907187	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATATATGTCTGTA	2183	False	NA	NA	False	TTTAAA	-27	NA	116505912	116463592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469665_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.67	chr3	-	4711	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	392	622	-1	-622	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTAAGTGAGTTGTGA	2188	False	NA	NA	False	ATTAAA	-38	NA	116505907	116463740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.68	chr3	-	3989	4	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-10910	-623	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	87.9886356298357	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCTAAGTGAGTTGTG	NA	False	NA	NA	False	ATTAAA	-37	NA	116480987	116463741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116474753_116474926_116480710_116480834_116480919
ES.22457.69	chr3	-	4728	8	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-35	-624	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	63.6989090990432	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCCTAAGTGAGTTGT	2569	False	NA	NA	False	ATTAAA	-36	NA	116505526	116463742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505331
ES.22457.7	chr3	-	7634	11	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	6043	0	5857	0	3prime_fragment	FALSE	canonical	3	876	junction_3	59.9946664296086	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116450283	116424812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052
ES.22457.70	chr3	-	4508	7	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	-7	-626	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	65.8088562091422	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTGCCTAAGTGAGTT	2182	False	NA	NA	False	ATTAAA	-34	NA	116505913	116463744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116505731
ES.22457.71	chr3	-	4640	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	8	-628	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	63.0620038258428	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACTTGCCTAAGTGAG	2197	False	NA	NA	False	ATTAAA	-32	NA	116505898	116463746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480766_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.72	chr3	-	4691	8	NNC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	9	-629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.918800927895	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCACTTGCCTAAGTGA	2198	False	NA	NA	False	ATTAAA	-31	NA	116505897	116463747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481068_116488074_116488284_116505731
ES.22457.73	chr3	-	2695	1	ISM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	39167	1319	2945	-1319	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCGACATCCTGCTCTG	NA	False	NA	NA	False	AAAAAG	-4	NA	116467132	116464437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116464400_116467100
ES.22457.74	chr3	-	3696	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	387	1642	-6	-1642	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTATTTCTCAGCTA	2183	False	NA	NA	False	TTTAAA	-20	NA	116505912	116464760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.75	chr3	-	2200	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	436	3089	-2	594	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCCTACTGCCATATG	2232	False	NA	NA	False	ATTAAA	-16	NA	116505863	116466207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.76	chr3	-	2063	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	401	3261	8	422	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTCCATTTTGAGAAAT	2197	False	NA	NA	False	AATAAA	-16	NA	116505898	116466379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.77	chr3	-	1647	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	401	3677	8	6	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGGGTTTTATATCTA	2197	False	NA	6	True	AATATA	-20	NA	116505898	116466795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.78	chr3	-	1962	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.4468345131361	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATCCAGGGTTTTA	2183	False	NA	0	True	AATATA	-14	NA	116505912	116466801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469818_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.79	chr3	-	3541	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.4468345131361	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTATCCAGGGTTT	2214	False	NA	-2	True	AATATA	-12	NA	116505881	116466803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116467368_116468819_116468954_116469510_116469927_116470008_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.8	chr3	-	3053	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	6	-5	intron_retention	FALSE	canonical	3	876	junction_3	58.3068606597886	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116456253	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ES.22457.80	chr3	-	3415	4	ISM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	466	14762	28	-2992	5prime_fragment	FALSE	canonical	3	172	junction_3	9.8770215933527	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGGCCTTTGGATGAG	2262	False	NA	NA	False	NA	NA	NA	116505833	116477880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.81	chr3	-	10398	3	NNC	ENSMUSG00000027957.14	novel	657	3	NA	NA	9	-2992	intron_retention	TRUE	canonical	0	0	junction_1	86	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGGCCTTTGGATGAG	2243	False	NA	NA	False	NA	NA	NA	116505852	116477880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116486180_116486305_116488284_116505731
ES.22457.82	chr3	-	836	4	ISM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	415	17392	-4	3524	5prime_fragment	FALSE	canonical	3	172	junction_3	9.8770215933527	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAACTGAGCAGTAGGC	2211	False	NA	NA	False	AATAAA	-23	NA	116505884	116480510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116480834_116480919_116481075_116488078_116488284_116505731
ES.22457.83	chr3	-	247	2	Intergenic	novelGene_18472	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGGGCTGGAGTGTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	116517193	116495050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116495113_116517008
ES.22457.84	chr3	-	231	1	Intergenic	novelGene_18473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACGAACCAGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	116517194	116516963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116517000_116517200
ES.22457.9	chr3	-	5015	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	876	junction_3	59.928707645001	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	False	NA	-6	True	AATAAA	-31	NA	116456263	116424817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116441559_116442167_116442231_116445052_116445149_116456043
ES.22458.1	chr3	-	209	1	ISM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	67560	399	40644	-399	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCACAAAGATAAAACTCCA	NA	False	NA	NA	False	NA	NA	NA	116534255	116534046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116534000_116534300
ES.22459.1	chr3	+	3913	27	Antisense	novelGene_ENSMUSG00000033400.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TATAAA	-15	NA	116546894	116601087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116547013_116548521_116548656_116551885_116552003_116552342_116552565_116562433_116562537_116564987_116565167_116566037_116566172_116566414_116566549_116570176_116570309_116572267_116572405_116572705_116572817_116572904_116573034_116574377_116574524_116574638_116574797_116574891_116574994_116576168_116576290_116578097_116578292_116578710_116578846_116580175_116580276_116580366_116580471_116580846_116581003_116581919_116582032_116582174_116582357_116584654_116584856_116585663_116585834_116587260_116587471_116600915
ES.22459.2	chr3	+	3339	4	Antisense	novelGene_ENSMUSG00000106511.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	5804	False	NA	NA	False	NA	NA	NA	116554982	116616610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116555181_116555228_116555705_116613828_116616400_116616516
ES.22459.3	chr3	+	3485	4	Antisense	novelGene_ENSMUSG00000106511.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTCTGTGGTGTT	6078	False	NA	NA	False	NA	NA	NA	116555256	116616611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116555687_116613301_116614339_116614471_116616400_116616521
ES.22459.5	chr3	+	3862	5	Antisense	novelGene_ENSMUSG00000033400.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TATAAA	-15	NA	116582328	116601087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116584856_116585663_116585834_116587260_116587471_116600079_116600560_116600612
ES.22459.7	chr3	+	3096	4	Antisense	novelGene_ENSMUSG00000033400.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	TATAAA	-34	NA	116582330	116601106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_116584856_116585663_116585834_116587260_116587471_116600915
ES.22459.8	chr3	+	2030	1	Intergenic	novelGene_18475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGTGGTGGCGCACA	1124	False	NA	NA	False	NA	NA	NA	116596119	116598149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116596100_116598100
ES.2246.1	chr10	-	179	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	3417930	3417751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_3417800_3417900
ES.22460.1	chr3	-	6515	32	NIC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	-128	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	12.682466367934	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTTTGCTTTCCTCCA	NA	False	NA	-2	True	AATAAA	-16	NA	116601943	116536699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_116538585_116540028_116540163_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.10	chr3	-	2112	14	NNC	ENSMUSG00000033400.15	novel	6978	33	NA	NA	7225	-1534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.7397821618248	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	116567674	116538233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116567582
ES.22460.11	chr3	-	4935	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-56	4746	-56	-1694	multi-exon	FALSE	canonical	3	13	junction_28	10.2172903022423	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTTTAAAAATCTCATT	NA	False	NA	NA	False	CATAAA	-16	NA	116601871	116538393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.12	chr3	-	5193	30	ISM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-34	11195	-34	-3112	5prime_fragment	FALSE	canonical	3	13	junction_24	10.8296725422413	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCCTCCCTGGGTGTT	NA	False	NA	NA	False	AATAAA	-36	NA	116601849	116544842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.13	chr3	-	4449	28	FSM	ENSMUSG00000033400.15	ENSMUST00000159742.8	4344	28	-105	0	-68	0	multi-exon	FALSE	canonical	3	13	junction_22	11.119996447286	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTGTGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	116601883	116548183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.14	chr3	-	4168	27	ISM	ENSMUSG00000033400.15	ENSMUST00000159742.8	4344	28	-126	3532	-89	-3532	5prime_fragment	FALSE	canonical	3	13	junction_21	11.3147544665827	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGGTAGTATTGACA	NA	False	NA	NA	False	GATAAA	-25	NA	116601904	116551715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.15	chr3	-	176	1	Intergenic	novelGene_18474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	8596	False	NA	NA	False	NA	NA	NA	116586277	116586101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116586100_116586300
ES.22460.2	chr3	-	6634	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-66	3057	-66	-5	multi-exon	FALSE	canonical	3	13	junction_28	10.2172903022423	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGACTCTCTTTGCTTTC	NA	False	NA	-7	True	AATAAA	-11	NA	116601881	116536704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.3	chr3	-	5878	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-76	3823	-76	-771	multi-exon	FALSE	canonical	3	13	junction_28	10.2172903022423	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATAAAGCAATTCTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	116601891	116537470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.4	chr3	-	5167	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-101	4559	-101	-1507	multi-exon	FALSE	canonical	3	13	junction_28	10.2172903022423	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATCTCTTTTTGGCTTTT	NA	False	NA	NA	False	AAAACA	-9	NA	116601916	116538206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.5	chr3	-	5235	34	NNC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	38	-1510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	12.3165323730736	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGATCTCTTTTTGGCT	NA	False	NA	NA	False	AAAACA	-6	NA	116601642	116538209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601331
ES.22460.6	chr3	-	5135	34	NNC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	-51	-1510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	12.3165323730736	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGATCTCTTTTTGGCT	NA	False	NA	NA	False	AAAACA	-6	NA	116601866	116538209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601088_116601676
ES.22460.7	chr3	-	5321	35	NNC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	-51	-1510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.9484986689884	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGATCTCTTTTTGGCT	NA	False	NA	NA	False	AAAACA	-6	NA	116601866	116538209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551203_116551455_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578752_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.8	chr3	-	4941	33	NNC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	-76	-1534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	13.7396267689483	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	116601891	116538233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582347_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22460.9	chr3	-	5061	34	NNC	ENSMUSG00000033400.15	novel	9625	34	NA	NA	-30	-1534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3311367264346	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	116601845	116538233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_116538577_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ES.22461.1	chr3	+	2731	17	FSM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	-281	-73	-281	73	multi-exon	FALSE	canonical	3	13	junction_1	82.2666918852946	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTGTGTCTTTGGGA	NA	False	NA	-85	True	NA	NA	NA	116652831	116697200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.10	chr3	+	2766	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1548	54	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAGAAAAGAAAGAATAAAT	NA	False	NA	NA	False	NA	NA	NA	116654763	116697181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.11	chr3	+	6883	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1549	-464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	105.535224421754	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTAGCACTGTTCCTA	NA	False	NA	16	True	AATAAA	-24	NA	116654764	116701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698133_116698195
ES.22461.12	chr3	+	2414	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1553	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.0461999937154	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116654768	116697127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655066_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.14	chr3	+	3643	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2039	1422	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTCTACATAGATTTT	NA	False	NA	8	True	AATAAA	-15	NA	116655254	116698549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.15	chr3	+	6336	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2088	-465	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	105.535224421754	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTAGCACTGTTCCT	NA	False	NA	15	True	AATAAA	-23	NA	116655303	116701361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698134_116698203
ES.22461.16	chr3	+	6429	18	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2089	-464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	86.7537181477356	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTAGCACTGTTCCTA	NA	False	NA	16	True	AATAAA	-24	NA	116655304	116701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698138_116698203
ES.22461.18	chr3	+	6342	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2092	-464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	105.535224421754	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTAGCACTGTTCCTA	NA	False	NA	16	True	AATAAA	-24	NA	116655307	116701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698147_116698207
ES.22461.2	chr3	+	3833	17	NNC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	-189	1420	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	112.775478689962	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTCTACATAGATT	NA	False	NA	6	True	AATAAA	-13	NA	116652923	116698547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116653284_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698140_116698203
ES.22461.22	chr3	+	6063	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2101	-729	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	105.535224421754	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGCTAGATGAAATTG	NA	False	NA	NA	False	AATATA	-17	NA	116655316	116701097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698138_116698203
ES.22461.23	chr3	+	2226	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2104	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	91.3859702337047	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	116655319	116697167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116695962_116696107_116696578_116696641_116696717
ES.22461.24	chr3	+	6479	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2106	-463	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116655321	116701363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.25	chr3	+	6403	18	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2106	-467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	86.7537181477356	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCCTTGTAGCACTGTTC	NA	False	NA	13	True	AATAAA	-21	NA	116655321	116701359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698132_116698203
ES.22461.26	chr3	+	3674	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2109	1434	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATTTTAGCTAAAAATAG	NA	False	NA	20	True	AATAAA	-27	NA	116655324	116698561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.28	chr3	+	2278	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2112	37	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	84.795249719545	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	116655327	116697164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659833_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.29	chr3	+	3513	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2112	1431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	105.535224421754	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAGATTTTAGCTAAAAA	NA	False	NA	17	True	AATAAA	-24	NA	116655327	116698558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698138_116698203
ES.22461.3	chr3	+	2476	16	NIC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	-148	40	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	85.9090992464322	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	116652964	116697167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116653284_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.30	chr3	+	2014	16	NNC	ENSMUSG00000033386.11	novel	573	4	NA	NA	2118	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.3157383957663	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655333	116697127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.31	chr3	+	2171	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2119	28	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	91.8440707576343	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116655334	116697155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.32	chr3	+	6391	18	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2119	-467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	86.7537181477356	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCCTTGTAGCACTGTTC	NA	False	NA	13	True	AATAAA	-21	NA	116655334	116701359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698150_116698220
ES.22461.34	chr3	+	2278	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.9547873029965	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGCCTCTGTTTCC	NA	False	NA	7	True	NA	NA	NA	116655337	116697292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.35	chr3	+	2141	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2122	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.9547873029965	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116655337	116697155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.37	chr3	+	1164	8	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2123	-5072	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	114.698184246255	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCAGAGAGGATGGCC	NA	False	NA	NA	False	AATAAA	-28	NA	116655338	116679550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116679275
ES.22461.38	chr3	+	1195	7	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	-5377	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	49.6241428697318	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTCATGTCTGTAT	NA	False	NA	NA	False	AAGAAA	-8	NA	116655339	116679245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755
ES.22461.39	chr3	+	2139	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	89.0593201186715	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655339	116697127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692870_116694309_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.4	chr3	+	2618	16	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	-132	-32	-132	32	intron_retention	FALSE	canonical	3	13	junction_1	83.9146126858858	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116652980	116697159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578
ES.22461.40	chr3	+	3585	18	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	1430	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	86.7537181477356	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATTTTAGCTAAAA	NA	False	NA	16	True	AATAAA	-23	NA	116655339	116698557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698134_116698203
ES.22461.41	chr3	+	1917	15	NNC	ENSMUSG00000033386.11	novel	573	4	NA	NA	2124	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	91.1158995063822	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	116655339	116697125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.43	chr3	+	3595	18	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	1430	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	86.7537181477356	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATTTTAGCTAAAA	NA	False	NA	16	True	AATAAA	-23	NA	116655339	116698557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698144_116698203
ES.22461.45	chr3	+	6436	16	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	6723	-4228	6620	-471	3prime_fragment	FALSE	canonical	3	287	junction_10	27.0313398360742	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTTCCTTGTAGCACT	NA	False	NA	9	True	AATAAA	-17	NA	116659835	116701355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.46	chr3	+	2485	16	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	6723	-277	6620	277	3prime_fragment	FALSE	canonical	3	287	junction_10	27.0313398360742	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGACTAGTTTATTT	NA	False	NA	NA	False	TTTAAA	-10	NA	116659835	116697404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.47	chr3	+	6376	17	NNC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	6620	-471	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	85.255864900897	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTTCCTTGTAGCACT	NA	False	NA	9	True	AATAAA	-17	NA	116659835	116701355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698144_116698203
ES.22461.48	chr3	+	2363	16	ISM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	6723	-155	6620	155	3prime_fragment	FALSE	canonical	3	287	junction_10	27.0313398360742	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTCTGATCTGCCTGC	NA	False	NA	-3	True	NA	NA	NA	116659835	116697282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.49	chr3	+	6378	17	NNC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	6620	-463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	85.255864900897	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116659835	116701363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698138_116698203
ES.22461.5	chr3	+	3920	17	FSM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	-113	-1430	-113	1430	multi-exon	FALSE	canonical	3	13	junction_1	82.2666918852946	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATTTTAGCTAAAA	NA	False	NA	16	True	AATAAA	-23	NA	116652999	116698557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.50	chr3	+	2247	16	NNC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	6620	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.8774360170055	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	116659835	116697167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116659927_116671882_116672100_116674415_116674557_116675411_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.51	chr3	+	2137	15	NIC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	6620	28	combination_of_known_splicesites	FALSE	canonical	1	11	junction_6	85.905649478046	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116659835	116697155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.53	chr3	+	3918	1	Intergenic	novelGene_18477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGAATTTGTCTTTTCT	4682	False	NA	NA	False	NA	NA	NA	116666450	116670368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116666400_116670400
ES.22461.54	chr3	+	2151	15	FSM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	5	4667	5	32	multi-exon	FALSE	canonical	3	287	junction_9	27.5725388377491	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116671880	116697159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.55	chr3	+	6279	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	5	-471	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	88.0461999937154	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTTCCTTGTAGCACT	NA	False	NA	9	True	AATAAA	-17	NA	116671880	116701355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698136_116698203
ES.22461.56	chr3	+	2115	15	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.903803465432	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-45	NA	116671880	116697126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116672100_116674415_116674557_116675413_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.57	chr3	+	6284	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	5	-463	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	88.0461999937154	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116671880	116701363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698145_116698215
ES.22461.58	chr3	+	1940	14	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	2528	4671	2528	28	3prime_fragment	FALSE	canonical	3	287	junction_8	27.3309759891723	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116674403	116697155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.59	chr3	+	1366	10	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	12677	4671	10	28	3prime_fragment	FALSE	canonical	3	287	junction_4	26.7032156939021	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116684552	116697155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.6	chr3	+	6559	17	NNC	ENSMUSG00000033386.11	novel	2377	17	NA	NA	-96	-463	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	112.775478689962	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116653016	116701363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116653284_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717_116698147_116698207
ES.22461.61	chr3	+	720	7	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	18462	4944	-21	-245	3prime_fragment	FALSE	canonical	3	287	junction_1	24.0462517291619	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTTGTGCCGACCACCT	NA	False	NA	NA	False	ATTAAA	-15	NA	116690337	116696882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.62	chr3	+	4142	2	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	6814	-463	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTAGCACTGTTCCTAT	NA	False	NA	17	True	AATAAA	-25	NA	116697172	116701363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116698159_116698207
ES.22461.63	chr3	+	4094	2	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	6836	-465	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTAGCACTGTTCCT	NA	False	NA	15	True	AATAAA	-23	NA	116697194	116701361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116698138_116698210
ES.22461.65	chr3	+	3525	2	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	7405	-464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTAGCACTGTTCCTA	NA	False	NA	16	True	AATAAA	-24	NA	116697763	116701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116698130_116698203
ES.22461.67	chr3	+	3405	1	ISM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	26524	22	8041	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTAACTACA	NA	False	NA	NA	False	NA	NA	NA	116698399	116701804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_116698400_116701800
ES.22461.68	chr3	+	5139	1	Genic_Genomic	ENSMUSG00000033386.11	novel	NA	NA	NA	NA	9790	3461	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTCCCCAGACCCACC	NA	False	NA	NA	False	NA	NA	NA	116700148	116705287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_116700100_116705300
ES.22461.8	chr3	+	2960	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1546	157	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGATCTGCCTGCCT	NA	False	NA	-1	True	NA	NA	NA	116654761	116697284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22461.9	chr3	+	3266	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	1546	463	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTAGGAGATTTTCTCC	NA	False	NA	NA	False	AGTAAA	-38	NA	116654761	116697590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ES.22462.1	chr3	-	1120	1	Intergenic	novelGene_18476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTTTGTAAGAATTAA	5085	False	NA	NA	False	NA	NA	NA	116657563	116656443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116656400_116657600
ES.22463.1	chr3	-	3364	5	Antisense	novelGene_ENSMUSG00000033386.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116692898	116681753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_116684652_116685487_116685636_116689135_116689250_116690325_116690446_116692814
ES.22463.2	chr3	-	4438	1	Antisense	novelGene_ENSMUSG00000033386.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116688728	116684290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_116684300_116688700
ES.22463.3	chr3	-	3952	2	Antisense	novelGene_ENSMUSG00000033386.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACAGGCAGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	116694264	116688518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_116691835_116693628
ES.22464.1	chr3	-	2780	1	Intergenic	novelGene_18478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGCCTTGGTCATGGT	7363	False	NA	NA	False	ATTAAA	-34	NA	116705346	116702566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116702600_116705300
ES.22464.2	chr3	-	2125	1	Intergenic	novelGene_18479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGCCCCTCTACTCAAT	7363	False	NA	NA	False	NA	NA	NA	116705346	116703221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116703200_116705300
ES.22465.1	chr3	+	3006	1	Intergenic	novelGene_18480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTTTTGTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	116708126	116711132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_116708100_116711100
ES.22466.1	chr3	-	177	1	Intergenic	novelGene_18481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTATTCAGGTG	3523	False	NA	NA	False	NA	NA	NA	116858314	116858137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_116858100_116858300
ES.22467.1	chr3	+	2707	1	Intergenic	novelGene_18482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-36	NA	117149312	117152019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_117149300_117152000
ES.22468.1	chr3	-	177	1	Intergenic	novelGene_18483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	117298686	117298509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_117298500_117298700
ES.22469.1	chr3	-	1653	8	FSM	ENSMUSG00000028007.14	ENSMUST00000169812.8	1588	8	-78	13	-22	-13	multi-exon	FALSE	canonical	3	11	junction_1	6.9045976991969	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAATGGGTGTCTAT	NA	False	NA	NA	False	AATAAA	-7	NA	117662607	117575532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_117576026_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ES.22469.2	chr3	-	1855	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	-71	237	-71	-13	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAATGGGTGTCTAT	NA	False	NA	NA	False	AATAAA	-7	NA	117662656	117575532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ES.2247.1	chr10	+	178	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	3569379	3569557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_3569400_3569600
ES.22470.1	chr3	-	174	1	Intergenic	novelGene_18484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAACAGAAAGATG	NA	False	NA	NA	False	NA	NA	NA	118291026	118290852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_118290900_118291000
ES.22471.1	chr3	+	292	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	85	-31	85	31	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGCTGGCAAAAAAA	NA	False	NA	23	True	NA	NA	NA	119503249	119503541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_119503200_119503500
ES.22472.1	chr3	-	4608	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	437	-1268	21	1268	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCTTTTAATAAACAAGA	NA	False	NA	NA	False	AATAAA	-27	NA	119577016	119511122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.10	chr3	-	7554	3	ISM	ENSMUSG00000028134.12	ENSMUST00000197387.5	576	5	-660	-1351	-660	-252	intron_retention	FALSE	canonical	3	41	junction_1	27.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119520449	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514107_119514255_119514334_119514437
ES.22472.11	chr3	-	8140	8	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-3599	-252	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	39.6103470299963	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119540016	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119530785_119530847_119533963
ES.22472.12	chr3	-	3381	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	49	-252	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119577291	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.14	chr3	-	12102	11	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-67	-252	intron_retention	FALSE	canonical	3	41	junction_1	17.6283861995363	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119577104	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119519855_119533963_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.15	chr3	-	5417	6	ISM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	53795	252	-3453	-252	3prime_fragment	FALSE	canonical	3	41	junction_1	24.1876001289917	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119523242	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714
ES.22472.17	chr3	-	3201	13	FSM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	-277	-1326	-123	-252	multi-exon	FALSE	canonical	3	11	junction_4	23.7888571020598	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119577160	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.18	chr3	-	3066	15	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	4	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.7211530525905	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119576931	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119538529_119538593_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.22	chr3	-	3052	14	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	39	-252	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	24.8738830738507	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119577301	119512642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119577171
ES.22472.23	chr3	-	4240	13	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	198	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.2085059167368	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGGAGGTTTGATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	119576685	119512645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555426_119575152_119575184_119575328
ES.22472.24	chr3	-	3708	15	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-11	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.9182559788556	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGGAGGTTTGATGG	NA	False	NA	NA	False	ATTAAA	-16	NA	119576967	119512645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119575328_119576001_119576850
ES.22472.28	chr3	-	3417	5	ISM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	55602	-1321	-1492	-257	3prime_fragment	FALSE	canonical	3	11	junction_4	40.2399055664896	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTGGGAGGTTTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	119521281	119512647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714
ES.22472.29	chr3	-	3688	3	ISM	ENSMUSG00000028134.12	ENSMUST00000196203.2	937	4	17942	-1384	1450	-258	3prime_fragment	FALSE	canonical	3	41	junction_1	27.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119516586	119512648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514110_119514255_119514334_119514437
ES.22472.3	chr3	-	3191	4	ISM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	58119	-1	871	1	intron_retention	TRUE	canonical	3	41	junction_1	29.7806797922561	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCCTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	119518918	119512389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742
ES.22472.30	chr3	-	2968	12	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-121	-258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.9924234451439	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119577158	119512648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519870_119541240_119541352_119541438_119541604_119545512_119545657_119546633_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.32	chr3	-	3338	13	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	49	-258	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	29.4376695560109	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119577291	119512648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.33	chr3	-	3341	15	NNC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-119	-258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.8280788136663	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119577156	119512648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119521657_119521762_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.34	chr3	-	2912	13	FSM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	-201	-1113	-47	-465	multi-exon	FALSE	canonical	3	11	junction_4	23.7888571020598	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGTTCTTGTCAATCT	NA	False	NA	NA	False	AATAAA	-34	NA	119577084	119512855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.35	chr3	-	3126	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	-243	481	60	-481	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTCAAATTTATTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	119577280	119512871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.37	chr3	-	2862	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	11	-488	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	29.8808283908837	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCTACAGGTCAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	119577329	119512878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119577171
ES.22472.38	chr3	-	4538	6	NIC	ENSMUSG00000028134.12	novel	3777	14	NA	NA	-1269	134	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	42.9297099920323	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTAACTGCTGTGT	NA	False	NA	NA	False	TATAAA	-23	NA	119537686	119513834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519870_119533963
ES.22472.4	chr3	-	3485	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	293	-1	-123	1	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCCTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	119577160	119512389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.7	chr3	-	3439	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	-67	-7	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCACCAGCTGTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	119577104	119512397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22472.8	chr3	-	4045	6	ISM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	41114	-1570	648	-8	3prime_fragment	FALSE	canonical	3	11	junction_4	36.1164782336263	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCACCAGCTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	119535769	119512398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963
ES.22472.9	chr3	-	3353	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	173	251	60	-251	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGGTTTGATGGTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	119577280	119512641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ES.22473.1	chr3	+	173	1	Intergenic	novelGene_18485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	119673627	119673800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_119673600_119673800
ES.22474.1	chr3	-	3733	4	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	77	junction_3	12.657891697365	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTTGTGTCTGAGAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	120965344	120949048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120949707_120949835_120949952_120950049_120952905_120965240
ES.22474.10	chr3	-	3516	2	NIC	ENSMUSG00000028133.18	novel	1583	3	NA	NA	0	-1	intron_retention	FALSE	canonical	3	77	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTCATGTTTACT	NA	False	NA	-1	True	ATTAAA	-15	NA	120965344	120949492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120952905_120965240
ES.22474.11	chr3	-	3693	6	NNC	ENSMUSG00000028133.18	novel	1158	7	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_4	42.5205832509386	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTTTTCATGTTTAC	NA	False	NA	-2	True	ATTAAA	-14	NA	120965343	120949493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949727_120949835_120949952_120950049_120952905_120953418_120953626_120959882_120960062_120965240
ES.22474.12	chr3	-	3646	4	NIC	ENSMUSG00000028133.18	novel	1145	4	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_3	49.9955553580071	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTTTTCATGTTTAC	NA	False	NA	-2	True	ATTAAA	-14	NA	120965343	120949493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120949952_120950049_120952905_120953395_120953626_120965240
ES.22474.13	chr3	-	3248	7	NNC	ENSMUSG00000028133.18	novel	1158	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.9942629272632	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTGTTTTCATGTTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	120965341	120949494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949707_120949835_120949952_120950049_120950166_120950561_120952905_120959278_120959460_120959882_120960062_120965240
ES.22474.14	chr3	-	1674	8	NNC	ENSMUSG00000028133.18	novel	1158	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.3901993228051	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGATTTGTTTTCATGT	NA	False	NA	-6	True	ATTAAA	-10	NA	120965343	120949497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949707_120949835_120949952_120950049_120950166_120950561_120950712_120952284_120952905_120959278_120959460_120959882_120960062_120965240
ES.22474.15	chr3	-	175	1	Intergenic	novelGene_18486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	120958683	120958508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_120958500_120958700
ES.22474.2	chr3	-	3855	3	NIC	ENSMUSG00000028133.18	novel	1145	4	NA	NA	2	-4	intron_retention	FALSE	canonical	3	77	junction_2	15.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCTTGTGTCTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	120965341	120949052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120949952_120950049_120952905_120965240
ES.22474.3	chr3	-	1606	4	FSM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	0	-461	0	-4	multi-exon	FALSE	canonical	3	76	junction_2	14.8548533034381	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCTTGTGTCTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	120965343	120949052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_120949952_120950049_120950166_120952416_120952905_120965240
ES.22474.4	chr3	-	3953	2	NIC	ENSMUSG00000028133.18	novel	1583	3	NA	NA	0	-7	intron_retention	FALSE	canonical	3	77	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAAGGACTCTTGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	120965344	120949055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120952905_120965240
ES.22474.5	chr3	-	3507	4	NNC	ENSMUSG00000028133.18	novel	1145	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	2	junction_2	49.9688792038494	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120965343	120949490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949952_120950049_120952905_120953418_120953507_120965240
ES.22474.6	chr3	-	12341	4	NNC	ENSMUSG00000028133.18	novel	1145	4	NA	NA	3245	1	intron_retention	TRUE	non_canonical	0	0	junction_2	50.9116882454314	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTTTACTTT	NA	False	NA	1	True	ATTAAA	-17	NA	120962092	120949490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949952_120950049_120954785_120954861_120954951_120955036
ES.22474.7	chr3	-	3306	4	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	-16	0	intron_retention	FALSE	canonical	3	77	junction_3	12.657891697365	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965360	120949491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_120949707_120949835_120949952_120950049_120952905_120965240
ES.22474.8	chr3	-	3377	5	NNC	ENSMUSG00000028133.18	novel	1158	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_3	49.5347100526489	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965343	120949491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_120949707_120949835_120949952_120950049_120952905_120953418_120953507_120965240
ES.22474.9	chr3	-	1050	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	-11	445	-11	0	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965355	120949491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
ES.22475.1	chr3	-	178	1	Intergenic	novelGene_18487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGTACATTAAAT	NA	False	NA	NA	False	NA	NA	NA	121006105	121005927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121005900_121006100
ES.22476.1	chr3	+	180	1	Intergenic	novelGene_18488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	121031546	121031726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121031500_121031700
ES.22477.1	chr3	+	165	1	Intergenic	novelGene_18489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	121040756	121040921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121040800_121040900
ES.22478.1	chr3	-	178	1	Intergenic	novelGene_18490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGATAAAAG	NA	False	NA	NA	False	NA	NA	NA	121042630	121042452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121042500_121042600
ES.22479.1	chr3	+	312	1	Intergenic	novelGene_18491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	121047837	121048149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121047800_121048100
ES.2248.1	chr10	+	4521	15	NNC	ENSMUSG00000040624.19	novel	4478	16	NA	NA	-17	-4225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.93999269506162	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGAATGCATTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	3784861	3909301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3785059_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545
ES.2248.10	chr10	+	6515	13	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	15547	-2	15547	2	intron_retention	FALSE	canonical	3	11	junction_2	7.46473189218623	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCATTGAATTAATG	5248	False	NA	NA	False	AATAAA	-19	NA	3869132	3917300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
ES.2248.11	chr10	+	3637	10	ISM	ENSMUSG00000040624.19	ENSMUST00000154727.2	5405	15	29962	8000	-24343	-4228	internal_fragment	FALSE	canonical	3	12	junction_1	6.49406186497887	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGACCAGAATGCATTT	8884	False	NA	NA	False	AATAAA	-23	NA	3883547	3909298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545
ES.2248.12	chr10	+	3298	9	NIC	ENSMUSG00000040624.19	novel	5405	15	NA	NA	-17693	-2323	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	9.836157786453	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGTGCAAGTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	3890197	3911203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3910088
ES.2248.13	chr10	+	4822	1	NIC	ENSMUSG00000040624.19	novel	7369	17	NA	NA	-9796	-10610	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACGCTAAAAACATAGT	NA	False	NA	NA	False	NA	NA	NA	3898094	3902916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3898100_3902900
ES.2248.2	chr10	+	7333	15	NNC	ENSMUSG00000040624.19	novel	4478	16	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_13	9.61716153126105	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATTGAATTAATGGGT	NA	False	NA	NA	False	AATAAA	-22	NA	3784862	3917303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3785077_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899717_3906545_3908206_3913400
ES.2248.3	chr10	+	7314	16	NNC	ENSMUSG00000040624.19	novel	4478	16	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_1	8.81513849390165	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCATTGAATTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	3784872	3917300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3785059_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
ES.2248.4	chr10	+	7328	16	FSM	ENSMUSG00000040624.19	ENSMUST00000239159.2	4478	16	-4	-2846	-4	0	multi-exon	FALSE	canonical	3	8	junction_1	7.74137512906389	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTTCATTGAATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	3784874	3917298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3785077_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
ES.2248.5	chr10	+	4595	3	ISM	ENSMUSG00000040624.19	ENSMUST00000238840.2	1016	4	-77	11976	8	-11916	5prime_fragment	FALSE	canonical	3	8	junction_1	7.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3784886	3857446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3785077_3822926_3823442_3853556
ES.2248.6	chr10	+	171	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1596	False	NA	NA	False	NA	NA	NA	3790973	3791144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_3791000_3791100
ES.2248.7	chr10	+	2704	15	NNC	ENSMUSG00000040624.19	novel	5405	15	NA	NA	-99	-5866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.93999269506162	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGACAAATCAAGAGACC	NA	False	NA	NA	False	AAGAAA	-3	NA	3822567	3907660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3822589_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545
ES.2248.8	chr10	+	7278	15	ISM	ENSMUSG00000040624.19	ENSMUST00000042438.13	7190	16	105	8	105	-3	3prime_fragment	FALSE	canonical	3	11	junction_4	7.16994862361692	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAATTTTCATTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	3822771	3917295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
ES.2248.9	chr10	+	6216	1	NIC	ENSMUSG00000040624.19	novel	7369	17	NA	NA	9747	126	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCATATAACATACCTCT	3577	False	NA	NA	False	NA	NA	NA	3863332	3869548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3863300_3869500
ES.22480.1	chr3	-	141	1	Intergenic	novelGene_18492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTTCAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	121072425	121072284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121072300_121072400
ES.22481.1	chr3	-	146	1	Intergenic	novelGene_18493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	121082874	121082728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121082700_121082900
ES.22482.1	chr3	+	1959	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-40	118	-40	-118	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATGAAGAAAAAGCTT	NA	False	NA	26	True	AATAAA	-35	NA	121085381	121156625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ES.22482.2	chr3	+	1693	3	NNC	ENSMUSG00000039887.12	novel	474	3	NA	NA	-40	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTAAATTTTCAAAA	NA	False	NA	10	True	AATAAA	-19	NA	121085381	121156609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121085500_121092237_121092408_121155204
ES.22482.3	chr3	+	3140	4	NNC	ENSMUSG00000039887.12	novel	2037	4	NA	NA	-23	1213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1072795307661	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGGCCTTCCTATTCT	NA	False	NA	NA	False	NA	NA	NA	121085398	121157956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121085500_121092252_121092408_121113728_121113861_121155204
ES.22482.4	chr3	+	830	3	FSM	ENSMUSG00000039887.12	ENSMUST00000199554.2	441	3	-77	-312	-23	312	multi-exon	FALSE	canonical	3	4	junction_1	51	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACAGGTTCTCTTGGGA	NA	False	NA	24	True	AATAAA	-25	NA	121085398	121155668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121113728_121113861_121155204
ES.22482.5	chr3	+	984	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	-22	1075	-22	312	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACAGGTTCTCTTGGGA	NA	False	NA	24	True	AATAAA	-25	NA	121085399	121155668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ES.22482.6	chr3	+	950	3	FSM	ENSMUSG00000039887.12	ENSMUST00000198341.2	831	3	-122	3	-5	-3	multi-exon	FALSE	canonical	3	72	junction_1	4	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	121085416	121114307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121092252_121092408_121113728
ES.22482.7	chr3	+	3228	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	22	-1213	-3	1213	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGGCCTTCCTATTCT	NA	False	NA	NA	False	NA	NA	NA	121085443	121157956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ES.22482.8	chr3	+	1999	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	38	0	13	0	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAGGTATTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	121085459	121156743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ES.22482.9	chr3	+	937	4	NIC	ENSMUSG00000039887.12	novel	2037	4	NA	NA	14	311	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	44.1915024511375	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCACAGGTTCTCTTGGG	NA	False	NA	23	True	AATAAA	-24	NA	121085460	121155667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121085633_121092237_121092408_121113728_121113861_121155204
ES.22483.1	chr3	-	825	3	Antisense	novelGene_ENSMUSG00000039887.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGACTATTGAAAAAGA	NA	False	NA	NA	False	AAAAAG	-15	NA	121117163	121114198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_121114479_121115697_121115835_121116755
ES.22484.1	chr3	+	626	5	Antisense	novelGene_ENSMUSG00000106455.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	7.39932429347437	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGAGGCTAGAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	121163256	121186388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_121163338_121167049_121167167_121183220_121183397_121183747_121183846_121186234
ES.22484.2	chr3	+	529	3	Antisense	novelGene_ENSMUSG00000106455.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTCTTCATAGCC	NA	False	NA	NA	False	NA	NA	NA	121163264	121182375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_121163338_121167049_121167167_121182036
ES.22484.3	chr3	+	1672	6	Antisense	novelGene_ENSMUSG00000106455.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	7.62627038597505	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTCTTCATAGCC	NA	False	NA	NA	False	NA	NA	NA	121163268	121182375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_121163338_121167049_121167167_121170921_121170995_121176943_121177696_121177794_121178117_121182036
ES.22484.4	chr3	+	6528	1	Intergenic	novelGene_18494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTCTTCATAGCC	NA	False	NA	NA	False	NA	NA	NA	121175847	121182375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121175800_121182400
ES.22484.5	chr3	+	210	1	Intergenic	novelGene_18495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCATATCTACCTTGG	NA	False	NA	NA	False	NA	NA	NA	121178271	121178481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121178300_121178500
ES.22485.1	chr3	-	124	1	Intergenic	novelGene_18496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	121185155	121185031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121185000_121185200
ES.22486.1	chr3	+	1495	7	NNC	ENSMUSG00000053931.12	novel	836	6	NA	NA	-508	10	intron_retention	FALSE	canonical	0	0	junction_1	1881.32976021395	2021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTACTCATTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	121219637	121251608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121219664_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.10	chr3	+	1423	8	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1799.22883707528	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGATTACATGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	121220148	121251597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250881_121251244
ES.22486.13	chr3	+	2258	6	FSM	ENSMUSG00000053931.12	ENSMUST00000199188.5	2214	6	-44	0	4	0	multi-exon	FALSE	canonical	3	4363	junction_2	396.918329130817	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220149	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220478_121243597_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.14	chr3	+	2403	6	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	5	-3	intron_retention	FALSE	canonical	3	4254	junction_2	529.439930492591	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACAGGCTGGTTATTT	NA	False	NA	24	True	AATAAA	-24	NA	121220150	121251853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245649_121248595_121248743_121250730
ES.22486.15	chr3	+	4595	7	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	6	4	intron_retention	FALSE	canonical	0	0	junction_5	1877.26533523871	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCACAGGCTGGTTATT	NA	False	NA	23	True	AATAAA	-23	NA	121220151	121251852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121247004_121247394_121248743_121250730
ES.22486.17	chr3	+	4946	6	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_4	1995.31701741854	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220158	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121247004_121247394_121248743_121250730
ES.22486.19	chr3	+	8175	3	NNC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	20	3	intron_retention	FALSE	canonical	0	0	junction_2	2686	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCACAGGCTGGTTAT	NA	False	NA	22	True	AATAAA	-22	NA	121220165	121251851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121247004_121247394
ES.22486.2	chr3	+	1895	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	-94	248	-94	10	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTACTCATTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	121220051	121251608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.20	chr3	+	4370	5	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	4254	junction_2	542.013376218706	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220166	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245649_121248595
ES.22486.21	chr3	+	1637	8	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	1798.55123102242	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220166	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250862_121251244
ES.22486.22	chr3	+	4686	6	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_4	1995.31701741854	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTGATTACATGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	121220166	121251596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121247004_121247394_121248743_121250730
ES.22486.24	chr3	+	5132	5	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	22	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	2065.64994311718	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGGCTGGTTATTTT	NA	False	NA	25	True	AATAAA	-25	NA	121220167	121251854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245906_121248095
ES.22486.26	chr3	+	6924	5	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_4	2065.64994311718	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGAACCACAGGCTGG	NA	False	NA	18	True	AATAAA	-18	NA	121220167	121251847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121247004_121247394
ES.22486.27	chr3	+	4012	6	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	22	3	22	-3	intron_retention	FALSE	canonical	3	4254	junction_2	494.518513303597	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCACAGGCTGGTTATTT	NA	False	NA	24	True	AATAAA	-24	NA	121220167	121251853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595
ES.22486.29	chr3	+	2752	5	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-24	-3115	intron_retention	FALSE	canonical	0	0	junction_4	2065.64994311718	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAATGTTGCTGGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	121220169	121247677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121247004_121247394
ES.22486.3	chr3	+	2095	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	-48	2	-48	-2	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGGCTGGTTATTTT	NA	False	NA	25	True	AATAAA	-25	NA	121220097	121251854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.30	chr3	+	7320	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	24	2	-24	-2	intron_retention	FALSE	canonical	3	4254	junction_2	503.309712470032	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGGCTGGTTATTTT	NA	False	NA	25	True	AATAAA	-25	NA	121220169	121251854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031
ES.22486.31	chr3	+	6951	5	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	24	9	-24	-1	intron_retention	FALSE	canonical	3	4254	junction_2	473.982330894307	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGAACCACAGGCTGG	NA	False	NA	18	True	AATAAA	-18	NA	121220169	121251847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531
ES.22486.32	chr3	+	5084	5	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-24	8	intron_retention	FALSE	canonical	3	4254	junction_2	535.398216283917	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTACTCATTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	121220169	121251606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121248743_121250730
ES.22486.35	chr3	+	3750	6	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	28	259	-20	1	intron_retention	FALSE	canonical	3	4254	junction_2	494.518513303597	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGATTACATGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	121220173	121251597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595
ES.22486.36	chr3	+	1202	8	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2282.90284238184	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGATTACATGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	121220176	121251597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245174_121245531_121245649_121248595_121248743_121250730_121250877_121251437
ES.22486.4	chr3	+	2854	1	FSM	ENSMUSG00000106022.2	ENSMUST00000198374.2	1286	1	-1566	-2	-1566	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1892	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTGTGTATGGGTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	121220128	121222982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220100_121223000
ES.22486.40	chr3	+	1559	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	35	455	-13	-59	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAGGAAACTATTTTT	NA	False	NA	NA	False	CATAAA	-13	NA	121220180	121251401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.41	chr3	+	1180	8	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-13	-55	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	1798.55123102242	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAACTATTTTTTCTC	NA	False	NA	NA	False	CATAAA	-17	NA	121220180	121251405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250862_121251244
ES.22486.42	chr3	+	1961	8	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-10	1	intron_retention	FALSE	non_canonical	0	0	junction_1	1799.22883707528	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCACAGGCTGGTT	NA	False	NA	20	True	AATAAA	-20	NA	121220183	121251849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220305_121220347_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.43	chr3	+	1244	8	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1799.22883707528	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220184	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250877_121251634
ES.22486.44	chr3	+	1725	7	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-8	-17	intron_retention	FALSE	non_canonical	0	0	junction_5	1877.26533523871	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCATGATCAGTGTGCA	NA	False	NA	NA	False	TTTAAA	-2	NA	121220185	121251579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245641_121248594_121248743_121250730
ES.22486.45	chr3	+	5165	5	NIC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	4363	junction_2	414.440209801124	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220189	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121244008_121245031_121245170_121245531_121248743_121250730
ES.22486.46	chr3	+	4077	4	NNC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_2	2534.50906927204	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGGCTGGTTATTTT	NA	False	NA	25	True	AATAAA	-25	NA	121220195	121251854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121245622_121248095_121248743_121250730
ES.22486.47	chr3	+	1164	8	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	1797.87364201522	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGATTACATGTGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	121220196	121251598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730_121250862_121251437
ES.22486.49	chr3	+	1869	6	FSM	ENSMUSG00000053931.12	ENSMUST00000199188.5	2214	6	95	250	95	0	multi-exon	FALSE	canonical	3	4363	junction_2	396.918329130817	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGATTACATGTGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	121220288	121251598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121220478_121243597_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.5	chr3	+	4834	6	NNC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	-17	-1	intron_retention	TRUE	canonical	0	0	junction_4	2054.61562341962	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGAACCACAGGCTGG	NA	False	NA	18	True	AATAAA	-18	NA	121220128	121251847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121244008_121245031_121245170_121245531_121247004_121247394_121248743_121250730
ES.22486.50	chr3	+	5115	5	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	4254	junction_2	535.398216283917	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGAACCACAGGCTGG	NA	False	NA	18	True	AATAAA	-18	NA	121220379	121251847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121248743_121250730
ES.22486.51	chr3	+	3586	1	FSM	ENSMUSG00000106022.2	ENSMUST00000198374.2	1286	1	124	-2424	124	2424	mono-exon	FALSE	NA	NA	NA	NA	NA	1891	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAGAAAGAAGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	121221818	121225404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121221800_121225400
ES.22486.52	chr3	+	1523	4	FSM	ENSMUSG00000053931.12	ENSMUST00000196671.2	1053	4	375	-845	375	0	multi-exon	FALSE	canonical	3	5093	junction_1	142.289220330362	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121245028	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121245170_121245531_121245649_121248595_121248743_121250730
ES.22486.53	chr3	+	3944	1	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	3000	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2014	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGATTACATGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	121247653	121251597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121247700_121251600
ES.22486.54	chr3	+	2834	1	Genic_Genomic	ENSMUSG00000053931.12	novel	NA	NA	NA	NA	-432	1278	mono-exon	FALSE	NA	NA	NA	NA	NA	2018	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	121250300	121253134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_121250300_121253100
ES.22486.6	chr3	+	2623	5	NIC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	4363	junction_2	443.446938764944	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220146	121251848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121244008_121245031_121245649_121248595_121248743_121250730
ES.22486.7	chr3	+	2152	6	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	4254	junction_2	529.439930492591	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGATTACATGTGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	121220146	121251598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245649_121248595_121248743_121250730
ES.22486.8	chr3	+	5180	5	NNC	ENSMUSG00000053931.12	novel	2214	6	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_3	2220.69527400767	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACCACAGGCTGGTTA	NA	False	NA	21	True	AATAAA	-21	NA	121220147	121251850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121220478_121243597_121244008_121245031_121247004_121247394_121248743_121250730
ES.22487.1	chr3	-	2829	1	FSM	ENSMUSG00000105813.2	ENSMUST00000197338.2	3339	1	517	-7	517	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGGCAAGACTGTTGA	NA	False	NA	NA	False	AATAAA	-24	NA	121220706	121217877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121217900_121220700
ES.22488.1	chr3	-	326	1	Intergenic	novelGene_18497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGCAAAGCAGAAACA	8332	False	NA	NA	False	NA	NA	NA	121224097	121223771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121223800_121224100
ES.22488.2	chr3	-	156	1	Intergenic	novelGene_18498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	8334	False	NA	NA	False	NA	NA	NA	121224095	121223939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121223900_121224100
ES.22489.1	chr3	+	175	1	Intergenic	novelGene_18501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTTAAAGGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	121285346	121285521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121285300_121285500
ES.2249.1	chr10	-	4639	9	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAATGTCAGACTCGAA	NA	False	NA	NA	False	NA	NA	NA	3915497	3883536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_3883746_3887847_3887979_3890165_3890349_3890434_3890531_3890630_3890752_3897521_3897600_3899662_3899724_3906542_3908205_3913399
ES.2249.2	chr10	-	184	1	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAACTACATA	NA	False	NA	NA	False	NA	NA	NA	3885558	3885374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_3885400_3885600
ES.22490.1	chr3	+	5684	1	Antisense	novelGene_ENSMUSG00000039865.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATAAAATACTGT	NA	False	NA	NA	False	NA	NA	NA	121310923	121316607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_121310900_121316600
ES.22491.1	chr3	-	2718	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	-99	1	-99	-1	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTTGTTCATCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	121326152	121253177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ES.22491.3	chr3	-	3326	1	Intergenic	novelGene_18499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGAAGGATTCACCTT	6354	False	NA	NA	False	NA	NA	NA	121270837	121267511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121267500_121270800
ES.22491.4	chr3	-	1809	12	NNC	ENSMUSG00000039865.9	novel	2620	15	NA	NA	125	-26500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.52380273853211	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGAAATCCGAACAT	NA	False	NA	NA	False	NA	NA	NA	121325928	121279676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305966_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ES.22491.5	chr3	-	170	1	Intergenic	novelGene_18500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCAAGCAGGGA	2556	False	NA	NA	False	NA	NA	NA	121280543	121280373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121280400_121280500
ES.22491.6	chr3	-	4537	1	NIC	ENSMUSG00000039865.9	novel	2620	15	NA	NA	25147	22727	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAAGTTAAAATTTGGC	NA	False	NA	NA	False	AAAAAG	-12	NA	121295609	121291072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121291100_121295600
ES.22491.7	chr3	-	1410	6	NIC	ENSMUSG00000039865.9	novel	2646	4	NA	NA	101	-1583	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.11617874986288	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCTAAATACTTCTT	NA	False	NA	NA	False	NA	NA	NA	121325952	121315382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121316171_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ES.22492.1	chr3	-	167	1	Intergenic	novelGene_18502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCTAAATTTA	NA	False	NA	NA	False	NA	NA	NA	121332420	121332253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121332300_121332400
ES.22493.1	chr3	+	172	1	Intergenic	novelGene_18503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGAGCGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	121334723	121334895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121334700_121334900
ES.22494.1	chr3	+	283	1	Intergenic	novelGene_18508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCCAAACA	573	False	NA	NA	False	NA	NA	NA	121370226	121370509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121370200_121370500
ES.22495.1	chr3	+	2084	2	Intergenic	novelGene_18509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACCATAATTAAAAAAAAAA	2662	False	NA	NA	False	NA	NA	NA	121372315	121375595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121372370_121373565
ES.22496.1	chr3	-	5380	2	Intergenic	novelGene_18504	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGATCAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	121349575	121344118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121344335_121344411
ES.22496.2	chr3	-	2387	1	Intergenic	novelGene_18505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTCATTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	121347279	121344892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121344900_121347300
ES.22496.3	chr3	-	4926	9	Intergenic	novelGene_18506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	0.707106781186548	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCCACCCAGGGAATT	NA	False	NA	NA	False	NA	NA	NA	121383013	121348637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121349399_121349576_121352198_121353001_121353165_121353350_121353470_121353658_121353872_121353959_121354696_121355574_121355722_121365186_121365251_121382911
ES.22496.4	chr3	-	3200	5	Intergenic	novelGene_18507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATGCTTCCCACCCA	NA	False	NA	NA	False	NA	NA	NA	121383048	121348644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121349121_121349572_121349714_121352402_121354723_121355595_121355722_121382911
ES.22496.5	chr3	-	5712	1	Intergenic	novelGene_18510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATTTATATCT	NA	False	NA	NA	False	AATAAA	-14	NA	121385560	121379848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121379800_121385600
ES.22496.6	chr3	-	992	1	Intergenic	novelGene_18511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTATAGTTTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	121383002	121382010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121382000_121383000
ES.22497.1	chr3	+	179	1	Intergenic	novelGene_18512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAATTTTATTAAG	NA	False	NA	NA	False	NA	NA	NA	121404447	121404626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121404400_121404600
ES.22498.1	chr3	-	4499	1	Intergenic	novelGene_18513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGGTTCTTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	121409766	121405267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121405300_121409800
ES.22499.1	chr3	+	184	1	Intergenic	novelGene_18514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGCTCCTTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	121410656	121410840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121410700_121410800
ES.225.1	chr1	+	4350	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	-28	0	-20	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	33758947	33781645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.10	chr1	+	4372	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.4223747727796	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGAATTGTGTGTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	33758977	33781641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760695_33760781_33762866_33763087_33764018_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.11	chr1	+	4231	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.1871756045653	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTGTGTGTGGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	33758978	33781643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.12	chr1	+	2367	7	NIC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	43.3461519501892	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGCTTTTCCTTTCT	NA	False	NA	6	True	TATAAA	-16	NA	33758989	33779790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_33759255_33760688_33760781_33762866_33763087_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.13	chr1	+	4389	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1343820557459	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAATTGTGTGTGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	33758990	33781642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33771310_33771396_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.14	chr1	+	2970	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6758240998577	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGTGTGTGGTCTGTC	NA	False	NA	NA	False	ACTAAA	-9	NA	33758993	33780244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.15	chr1	+	3419	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6758240998577	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCATTGGCAGAAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	33758993	33780174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775586_33775679_33775964_33777368_33777462_33778333
ES.225.16	chr1	+	4213	7	NIC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	43.3461519501892	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGAATTGTGTGTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	33758993	33781640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_33759255_33760688_33760781_33762866_33763087_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.17	chr1	+	4160	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	47.3549342299022	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGAATTGTGTGTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	33758993	33781641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759102_33760688_33760794_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.18	chr1	+	4290	8	NIC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	39.8082136945508	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAATTGTGTGTGGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	33759018	33781643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_33759255_33760688_33760794_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.19	chr1	+	4198	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	35	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6758240998577	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGAAAACTACTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	33759025	33781504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.2	chr1	+	4413	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6758240998577	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGAATTGTGTGTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	33758947	33781641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.21	chr1	+	4238	8	FSM	ENSMUSG00000004768.15	ENSMUST00000138024.8	4398	8	162	-2	-67	2	multi-exon	FALSE	canonical	0	0	junction_3	42.313214995617	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGAATTGTGTGTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	33759151	33781640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33759255_33760688_33760781_33762866_33763184_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.22	chr1	+	3748	8	NNC	ENSMUSG00000004768.15	novel	4218	8	NA	NA	32	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	52.0357020296093	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATATTTCTCTTGTCT	NA	False	NA	61	True	TATAAA	-4	NA	33759250	33779845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.23	chr1	+	3290	8	NNC	ENSMUSG00000004768.15	novel	4218	8	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	53.836866209553	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGCTTTTCCTTTCT	NA	False	NA	6	True	TATAAA	-16	NA	33759254	33779790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33760353_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775968_33777368_33777462_33778333
ES.225.24	chr1	+	4240	8	NNC	ENSMUSG00000004768.15	novel	1966	4	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	42.289575113322	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAATTGTGTGTGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	33759257	33781642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759458_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.25	chr1	+	2513	8	NNC	ENSMUSG00000004768.15	novel	4218	8	NA	NA	91	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.2161156637339	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTTGTCTTTTTTTT	NA	False	NA	68	True	TATAAA	-11	NA	33759309	33779852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759573_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.26	chr1	+	4163	8	NNC	ENSMUSG00000004768.15	novel	1966	4	NA	NA	900	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	41.675128392491	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAATGAATTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	33760387	33781639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33760514_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.27	chr1	+	3914	7	ISM	ENSMUSG00000004768.15	ENSMUST00000115174.4	4218	8	1199	128	1199	-124	3prime_fragment	FALSE	canonical	2	71	junction_5	21.7076535402199	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTATGTTTTCCTAT	NA	False	NA	NA	False	AATAAA	-29	NA	33760686	33781514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.28	chr1	+	179	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	33761856	33762035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33761900_33762000
ES.225.29	chr1	+	1948	6	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	4522	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.3920628670825	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGCTTTTCCTTTCT	NA	False	NA	6	True	TATAAA	-16	NA	33764009	33779790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.3	chr1	+	4214	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	-23	131	-15	-124	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTATGTTTTCCTAT	NA	False	NA	NA	False	AATAAA	-29	NA	33758952	33781514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.30	chr1	+	3449	5	NNC	ENSMUSG00000004768.15	novel	1966	4	NA	NA	-1418	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.5049154588569	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGTGCTTTTCCTTTCT	NA	False	NA	6	True	TATAAA	-16	NA	33772190	33779790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.31	chr1	+	4499	4	FSM	ENSMUSG00000004768.15	ENSMUST00000150593.8	1966	4	-708	-1825	-708	-21	multi-exon	FALSE	canonical	2	71	junction_2	15.5777619273972	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAACATTTCAA	NA	False	NA	NA	False	ATTAAA	-30	NA	33772900	33781617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.32	chr1	+	1551	2	FSM	ENSMUSG00000004768.15	ENSMUST00000132066.4	1764	2	149	64	149	-3	multi-exon	FALSE	canonical	3	109	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTGTGCTTTTCCTTTC	NA	False	NA	5	True	TATAAA	-15	NA	33777366	33779789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33777462_33778333
ES.225.4	chr1	+	3280	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-13	730	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.5133832469499	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCACGTTATTGGTTTCTT	NA	False	NA	NA	False	AATATA	-22	NA	33758954	33780583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775963_33777368_33777462_33778333
ES.225.5	chr1	+	2611	9	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6758240998577	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTTGTCTTTTTTTT	NA	False	NA	68	True	TATAAA	-11	NA	33758960	33779852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775200_33775268_33775880_33775964_33777368_33777462_33778333
ES.225.7	chr1	+	4177	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	40.1512446753471	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	33758967	33781645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.8	chr1	+	2381	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	40.1512446753471	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTTGTCTTTTTTTT	NA	False	NA	68	True	TATAAA	-11	NA	33758970	33779852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.225.9	chr1	+	2533	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	-4	1793	4	-1	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTTGTCTTTTTTTT	NA	False	NA	68	True	TATAAA	-11	NA	33758971	33779852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ES.2250.1	chr10	+	3961	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-273	-19	-273	19	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGATGTCACTGTCC	NA	False	NA	33	True	AATAAA	-38	NA	3922844	4106130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.10	chr10	+	3741	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	90.3999951442756	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923107	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982167_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.11	chr10	+	3528	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_27	86.4681487065656	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923107	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105690
ES.2250.12	chr10	+	3460	28	FSM	ENSMUSG00000040675.18	ENSMUST00000120585.8	3687	28	-22	249	-9	-249	multi-exon	FALSE	canonical	0	0	junction_27	88.2256428730143	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTTAGAGCTATCAT	NA	False	NA	NA	False	AATAAA	-33	NA	3923108	4116832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4116480
ES.2250.15	chr10	+	4491	17	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-8	111716	-8	-4556	5prime_fragment	FALSE	canonical	3	379	junction_1	25.8187795025249	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	AATACA	-19	NA	3923109	3994395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772
ES.2250.16	chr10	+	3555	28	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	104.091734365594	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGTGTTCAGCTAG	NA	False	NA	6	True	AATAAA	-11	NA	3923109	4106103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930399_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.17	chr10	+	3671	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.3992667826584	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAGCTAGTAAAGCCAC	NA	False	NA	15	True	AATAAA	-20	NA	3923109	4106112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957748_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.18	chr10	+	3532	27	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	104.050262376371	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAGCTAGTAAAGCCAC	NA	False	NA	15	True	AATAAA	-20	NA	3923109	4106112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033881_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.2	chr10	+	3844	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-279	-30	-253	30	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCCTTGTGAAGCCT	NA	False	NA	44	True	AGTAAA	-15	NA	3922864	4106141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.20	chr10	+	3630	29	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	127.327930108497	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923110	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3970028_3970093_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.21	chr10	+	3639	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.1904401845665	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923112	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965573_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.22	chr10	+	3455	27	NIC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	103.994338717101	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923113	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.23	chr10	+	3519	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-4	154	-4	-154	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTTTCTCTTTCATC	NA	False	NA	4	True	ACTAAA	-18	NA	3923113	4105957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.24	chr10	+	3554	27	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	91.500743683724	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923114	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.25	chr10	+	3695	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	89.5417689967187	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923115	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038306_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.26	chr10	+	3235	25	NIC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	107.485141091946	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923116	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.27	chr10	+	963	6	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-1	170260	-1	-63100	5prime_fragment	FALSE	canonical	3	379	junction_1	12.7027556065603	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTAGTGTTGGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	3923116	3935851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565
ES.2250.29	chr10	+	3594	27	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	91.1296300193061	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923117	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985323_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.3	chr10	+	3451	27	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	-242	7875	-242	-7875	5prime_fragment	FALSE	canonical	3	379	junction_1	32.5755607743491	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGTCATACCTAATAG	NA	False	NA	NA	False	AGTAAA	-16	NA	3922875	4098236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008
ES.2250.31	chr10	+	3557	29	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	88.6043933471031	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923123	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541_4105587_4105690
ES.2250.32	chr10	+	3534	27	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	143.478736853215	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923126	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934090_3934209_3935565_3935662_3939860_3939998_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.33	chr10	+	3537	28	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.076314724793	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923126	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957754_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.35	chr10	+	3726	29	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.546793765248	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923131	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3927705_3927779_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.36	chr10	+	4226	27	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	1	-29145	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_26	88.4910067974349	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTAGTATATAGCTGCA	NA	False	NA	NA	False	GATAAA	-16	NA	3923131	4076966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4075707
ES.2250.37	chr10	+	3477	1	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	1	-72343	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATCCCAACAATAATGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	3923131	3926608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923100_3926600
ES.2250.39	chr10	+	2627	23	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	-1	66606	-1	40554	5prime_fragment	FALSE	canonical	3	379	junction_1	28.7533325413143	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCACCTGTCTGGTTTTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	3923142	4039505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294
ES.2250.42	chr10	+	3614	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	90.4000861890651	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923143	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991833_3997840_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.44	chr10	+	3653	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	118.558002682231	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923148	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935663_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039273_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.45	chr10	+	5674	19	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	9	104281	9	2879	5prime_fragment	FALSE	canonical	3	379	junction_1	24.4012876608218	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTCTTTTGTGTTTT	NA	False	NA	NA	False	CATAAA	-1	NA	3923152	4001830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199
ES.2250.46	chr10	+	4173	27	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	9	6876	9	-6876	5prime_fragment	FALSE	canonical	3	379	junction_1	32.5755607743491	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTTTAAAGACATCTT	NA	False	NA	NA	False	NA	NA	NA	3923152	4099235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008
ES.2250.47	chr10	+	4609	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	11	-1085	11	1085	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGGCAGAGGTAGGT	NA	False	NA	NA	False	NA	NA	NA	3923154	4107196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.48	chr10	+	3513	27	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	11	7534	11	-7534	5prime_fragment	FALSE	canonical	3	379	junction_1	32.5755607743491	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTTCCTACTTTATT	NA	False	NA	NA	False	AAAACA	-3	NA	3923154	4098577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008
ES.2250.5	chr10	+	3657	29	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	-45	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	126.867654607919	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923072	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3959883_3959941_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.50	chr10	+	3501	27	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	28	-6	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	89.6994653431125	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923171	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.52	chr10	+	3533	28	NNC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	35	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	103.180026990797	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	3923178	4106114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038306_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.53	chr10	+	4703	27	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	61	3	intron_retention	FALSE	canonical	3	315	junction_26	39.8496620077282	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	3923204	4106114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.56	chr10	+	3542	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	93	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.3913454711059	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923236	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930399_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.58	chr10	+	3196	27	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	5488	6	5488	-6	3prime_fragment	FALSE	canonical	3	127	junction_26	67.107581649117	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3928631	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.59	chr10	+	3219	26	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	7096	6	7070	-6	3prime_fragment	FALSE	canonical	3	315	junction_25	38.4738872483663	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3930213	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.6	chr10	+	2186	15	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	118.007263698953	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3923093	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966781_4040129_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.60	chr10	+	2846	23	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	12421	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_22	95.0223114295873	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCAGCTAGTAAAGCCAC	NA	False	NA	15	True	AATAAA	-20	NA	3935564	4106112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105690
ES.2250.61	chr10	+	2763	21	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	12421	-7534	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	101.127580313187	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTTCCTACTTTATT	NA	False	NA	NA	False	AAAACA	-3	NA	3935564	4098577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3935667_3939860_3939998_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008
ES.2250.62	chr10	+	217	1	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGACATTTTCCTGTC	NA	False	NA	NA	False	AATAGA	-18	NA	3940610	3940827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_3940600_3940800
ES.2250.63	chr10	+	167	1	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3957203	3957370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_3957200_3957400
ES.2250.64	chr10	+	1983	15	ISM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	59086	6	-50	-6	3prime_fragment	FALSE	canonical	3	127	junction_14	89.274399283036	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	8999	False	NA	8	True	AATAAA	-13	NA	3982229	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.65	chr10	+	1805	12	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	68653	6	9491	-6	3prime_fragment	FALSE	canonical	3	315	junction_11	50.1322218679911	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	3991770	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.66	chr10	+	1739	11	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	74709	-3	15547	3	3prime_fragment	FALSE	canonical	3	315	junction_10	51.8004826232343	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCTAGTAAAGCCACTC	NA	False	NA	17	True	AATAAA	-22	NA	3997826	4106114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.67	chr10	+	6446	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATACCTAACATGCAT	NA	False	NA	NA	False	NA	NA	NA	4018344	4024790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4018300_4024800
ES.2250.68	chr10	+	1781	10	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	40535	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.538543200005	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGTGTTCAGCTAGTA	NA	False	NA	8	True	AATAAA	-13	NA	4022814	4106105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4023141_4025256_4025416_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ES.2250.69	chr10	+	1490	10	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	40679	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.898897500508	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCTAGTAAAGCCACT	NA	False	NA	16	True	AATAAA	-21	NA	4022958	4106113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4023141_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541_4105587_4105690
ES.2250.7	chr10	+	3675	28	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	88.2256428730143	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	3923102	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105548
ES.2250.70	chr10	+	2598	8	NNC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	51457	-5047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	167.480245560667	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGTGTCTTCCCTGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	4033736	4101064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098437_4099616
ES.2250.71	chr10	+	5426	4	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	125639	2	66477	-2	3prime_fragment	FALSE	canonical	3	315	junction_3	86.3802961071306	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTCAGCTAGTAAAGC	NA	False	NA	12	True	AATAAA	-17	NA	4048756	4106109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4053344_4056376_4056530_4098008_4098127_4105541
ES.2250.72	chr10	+	4820	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	524	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	4075041	4079861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4075000_4079900
ES.2250.9	chr10	+	2472	20	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	-13	147	combination_of_known_junctions	FALSE	canonical	2	31	junction_19	90.3262170400407	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAAGTGTTTTCATCTC	NA	False	NA	NA	False	ACTAAA	-21	NA	3923104	3999098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_3998786
ES.22500.1	chr3	+	139	1	Intergenic	novelGene_18515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTCTCTGATGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	121426258	121426397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121426300_121426400
ES.22501.1	chr3	-	251	1	Intergenic	novelGene_18516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGTTGGGGGCGGGGA	NA	False	NA	NA	False	NA	NA	NA	121498176	121497925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121497900_121498200
ES.22502.1	chr3	-	3114	1	FSM	ENSMUSG00000106224.2	ENSMUST00000197391.2	1808	1	-46	-1260	-46	1260	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAAGTGTTTGTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	121517097	121513983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121514000_121517100
ES.22502.2	chr3	-	2962	2	Genic_Genomic	ENSMUSG00000106224.2	novel	1808	1	NA	NA	-4	1253	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAGTTAAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	121517055	121513990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_121514732_121514834
ES.22503.1	chr3	+	1889	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-19	2	-19	-2	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCATTTATATCTTCCA	NA	False	NA	NA	False	AATAAA	-20	NA	121517166	121528695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
ES.22503.2	chr3	+	6089	3	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-16	11	-16	-11	intron_retention	FALSE	canonical	3	41	junction_2	18.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAGACAATCGCATTTA	NA	False	NA	NA	False	AATAAA	-11	NA	121517169	121528686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121517452_121518625_121518732_121522985
ES.22503.3	chr3	+	3442	5	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	-11	6	-11	-6	intron_retention	FALSE	canonical	3	41	junction_2	15.1058763400208	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATCGCATTTATATCT	NA	False	NA	NA	False	AATAAA	-16	NA	121517174	121528691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029
ES.22503.4	chr3	+	3282	4	NNC	ENSMUSG00000028128.14	novel	1872	6	NA	NA	1439	-4	intron_retention	TRUE	non_canonical	0	0	junction_2	29.1013554476229	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCGCATTTATATCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	121518657	121528693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121518732_121522985_121523359_121524293_121526190_121527754
ES.22504.1	chr3	-	152	1	Intergenic	novelGene_18517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	121535852	121535700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121535700_121535900
ES.22505.1	chr3	-	3546	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	-57	0	-57	0	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7074	False	NA	-1	True	ATTAAA	-22	NA	121609008	121552555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.10	chr3	-	3411	22	NIC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-2	-24	intron_retention	FALSE	canonical	3	145	junction_13	19.8478338348674	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGATAACC	7265	False	NA	-25	True	NA	NA	NA	121608817	121552579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.11	chr3	-	3373	23	NNC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-27	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.0846988468802	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGATAACC	7209	False	NA	-25	True	NA	NA	NA	121608873	121552579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553945_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.14	chr3	-	6904	22	NNC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-10	-24	intron_retention	TRUE	non_canonical	0	0	junction_2	42.7761668866524	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGATAACC	7257	False	NA	-25	True	NA	NA	NA	121608825	121552579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553959_121555063_121557506_121557549_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.17	chr3	-	4630	21	NIC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	6	-25	intron_retention	FALSE	canonical	3	145	junction_12	20.1996905916898	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAATGATAAC	7242	False	NA	-26	True	NA	NA	NA	121608840	121552580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.18	chr3	-	2364	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	126	999	-10	-150	multi-exon	FALSE	canonical	3	145	junction_14	20.5277981251709	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGACTTTTATGGCTCT	7257	False	NA	NA	False	NA	NA	NA	121608825	121553554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.19	chr3	-	5829	1	NIC	ENSMUSG00000028127.11	novel	3156	19	NA	NA	13044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	121595514	121589685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121589700_121595500
ES.22505.2	chr3	-	4737	20	NIC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	145	junction_11	20.7111783485937	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACATGTGCCTGACCTT	7252	False	NA	-3	True	ATTAAA	-20	NA	121608830	121552557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ES.22505.4	chr3	-	7095	19	NNC	ENSMUSG00000028127.11	novel	2467	22	NA	NA	-20114	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	44.9944098036661	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACATGTGCCTGACCT	6769	False	NA	-4	True	ATTAAA	-19	NA	121582615	121552558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578981_121579178
ES.22505.5	chr3	-	3492	24	NNC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	53.8563516797888	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACATGTGCCTGACCT	7527	False	NA	-4	True	ATTAAA	-19	NA	121608555	121552558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121607844_121607958_121608368
ES.22505.6	chr3	-	4104	3	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	47518	137	1204	-4	3prime_fragment	FALSE	canonical	3	194	junction_2	12	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACATGTGCCTGACC	NA	False	NA	-5	True	ATTAAA	-18	NA	121561297	121552559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_121553959_121555063_121555121_121558649
ES.22505.7	chr3	-	3344	23	NNC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	42.3759248661839	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACATGTGCCTGACC	7265	False	NA	-5	True	ATTAAA	-18	NA	121608817	121552559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586545_121590097_121590135_121608657
ES.22505.8	chr3	-	3908	23	NNC	ENSMUSG00000028127.11	novel	3489	23	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	42.3544908192978	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACATGTGCCTGACC	7521	False	NA	-5	True	ATTAAA	-18	NA	121608561	121552559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121607844
ES.22505.9	chr3	-	3312	22	FSM	ENSMUSG00000028127.11	ENSMUST00000197662.5	2467	22	-5	-840	-5	-9	multi-exon	FALSE	canonical	0	0	junction_21	43.3354787537978	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTACAGAACATGTGCC	7262	False	NA	-10	True	ATTAAA	-13	NA	121608820	121552564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121608657
ES.22506.1	chr3	-	198	1	Intergenic	novelGene_18518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAAGTGCATCTGAA	2789	False	NA	NA	False	NA	NA	NA	121720613	121720415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121720400_121720600
ES.22507.1	chr3	+	4961	22	NIC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.69331555346045	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTCTTATGGCTT	NA	False	NA	27	True	GATAAA	-28	NA	121746869	121809805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121747054_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.2	chr3	+	5193	23	FSM	ENSMUSG00000039831.17	ENSMUST00000037958.14	5787	23	-3	597	-3	2	multi-exon	TRUE	canonical	2	6	junction_1	3.88922010920586	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGGTTCTTATGGCTT	NA	False	NA	27	True	GATAAA	-28	NA	121746874	121809805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.3	chr3	+	5141	23	NIC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	5	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	4.72574275940822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTCTTAAATTATTT	NA	False	NA	11	True	GATAAA	-12	NA	121746883	121809789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796884_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.4	chr3	+	3979	22	NIC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	7	-964	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.69331555346045	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGAGTTGATTTTTT	NA	False	NA	NA	False	AAGAAA	-17	NA	121746885	121808839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121747054_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.5	chr3	+	5646	22	NNC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_15	5.69799264490627	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCAGGTTCTTATGGC	NA	False	NA	25	True	GATAAA	-26	NA	121746900	121809803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796998_121797893_121797999_121799303_121799403_121800423_121800565_121801192_121801382_121801602_121801741_121803500_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.6	chr3	+	178	1	Intergenic	novelGene_18519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	121757033	121757211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121757000_121757200
ES.22507.7	chr3	+	5199	23	NIC	ENSMUSG00000039831.17	novel	2503	20	NA	NA	-55	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	3.57707346100895	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTTCTTATGGCTTA	NA	False	NA	28	True	GATAAA	-29	NA	121761422	121809806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_121761607_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ES.22507.8	chr3	+	197	1	Intergenic	novelGene_18520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACCCACCAGAATGAATC	NA	False	NA	NA	False	NA	NA	NA	121798242	121798439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121798200_121798400
ES.22508.1	chr3	+	225	1	Intergenic	novelGene_18521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAACCCTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	121815717	121815942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121815700_121815900
ES.22509.1	chr3	+	5744	41	NNC	ENSMUSG00000028125.15	novel	7263	50	NA	NA	11188	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.770957197255464	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGCTCATTAGTGCTC	NA	False	NA	NA	False	AATAAA	-19	NA	121879290	121973710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_121879323_121880207_121880325_121880942_121881141_121897082_121897260_121898956_121899180_121904110_121904333_121906014_121906220_121910303_121910370_121913678_121913769_121915279_121915455_121917207_121917340_121919769_121919910_121920470_121920609_121921773_121921968_121922964_121923050_121926172_121926379_121926701_121926751_121928650_121928914_121930629_121930755_121931218_121931318_121932072_121932260_121935339_121935435_121937048_121937082_121940846_121940953_121941079_121941155_121941378_121941549_121942523_121942702_121948925_121949042_121949986_121950135_121951483_121951604_121951962_121952093_121955949_121956071_121956509_121956573_121957436_121957544_121960296_121960439_121963541_121963677_121964390_121964495_121964577_121964671_121967427_121967678_121969722_121969810_121973362
ES.22509.2	chr3	+	118	1	Intergenic	novelGene_18523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACCAAAAAACAAC	5007	False	NA	NA	False	NA	NA	NA	121972837	121972955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_121972800_121973000
ES.2251.1	chr10	-	2951	1	Antisense	novelGene_ENSMUSG00000040675.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAAGCTTTGTTTCTAG	NA	False	NA	NA	False	AATAAA	-14	NA	3923495	3920544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_3920500_3923500
ES.22510.1	chr3	-	169	1	Intergenic	novelGene_18522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAATAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	121944377	121944208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121944200_121944400
ES.22511.1	chr3	-	172	1	Intergenic	novelGene_18524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	121987295	121987123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_121987100_121987300
ES.22512.1	chr3	+	206	1	Intergenic	novelGene_18525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAAAGTTCTATGCTT	NA	False	NA	NA	False	AATAAA	-3	NA	122015803	122016009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122015800_122016000
ES.22513.1	chr3	-	469	1	Intergenic	novelGene_18526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTTTTTAACAAAC	NA	False	NA	NA	False	ATTAAA	-13	NA	122038998	122038529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122038500_122039000
ES.22514.1	chr3	+	4565	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-116	1140	-116	-1140	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTATGACTTTAAACTT	NA	False	NA	40	True	ATTAAA	-37	NA	122039089	122063241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.10	chr3	+	2627	6	FSM	ENSMUSG00000028124.16	ENSMUST00000176445.8	877	6	-483	-1267	41	57	multi-exon	FALSE	canonical	3	413	junction_2	53.2218000447185	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCTCCGCCTTACAAGA	NA	False	NA	NA	False	TTTAAA	-11	NA	122039246	122060141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442
ES.22514.11	chr3	+	4106	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	41	1442	41	-1442	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTTTGTCTACTTTGCA	NA	False	NA	NA	False	CATAAA	-1	NA	122039246	122062939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.12	chr3	+	4663	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	42	884	42	-884	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGTGAGTTGTATGTT	NA	False	NA	NA	False	AATATA	-38	NA	122039247	122063497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.13	chr3	+	3924	7	NNC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	43	-1151	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	187.779495389909	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGATACGCCAGTTTATG	NA	False	NA	29	True	ATTAAA	-26	NA	122039248	122063230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039290_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.14	chr3	+	4327	6	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	43	-6	intron_retention	FALSE	canonical	3	413	junction_2	52.8870494544742	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTTAATGTGTGTGT	NA	False	NA	10	True	AATAAA	-22	NA	122039248	122060586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122039761_122049193_122049260_122052855_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.15	chr3	+	4725	7	NNC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	-18	-753	intron_retention	FALSE	canonical	2	5	junction_3	182.193502140505	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCATAAAGCTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	122039298	122063628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039761_122049193_122049260_122052855_122052941_122055534_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.16	chr3	+	6173	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	96	-680	-15	680	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTAGTAATTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	122039301	122065061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.17	chr3	+	2302	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	103	3184	-8	605	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGAGACTTTGTGGTT	NA	False	NA	NA	False	AATACA	-14	NA	122039308	122061197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.18	chr3	+	1751	6	FSM	ENSMUSG00000028124.16	ENSMUST00000176445.8	877	6	-401	-473	12	473	multi-exon	FALSE	canonical	3	413	junction_2	53.2218000447185	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGTATGATATTGTGT	NA	False	NA	NA	False	NA	NA	NA	122039328	122059347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442
ES.22514.19	chr3	+	1836	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	139	3614	-16	175	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGGACCTCTTCCTG	NA	False	NA	NA	False	CATAAA	-25	NA	122039344	122060767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.2	chr3	+	4968	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-102	723	-102	-723	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTGTGTGTTACAC	NA	False	NA	NA	False	CATAAA	-18	NA	122039103	122063658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.20	chr3	+	1614	7	NNC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	2	-11	intron_retention	FALSE	canonical	2	5	junction_3	182.193502140505	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGGAAATTTAATGTG	NA	False	NA	5	True	AATAAA	-17	NA	122039362	122060581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039761_122049193_122049260_122052855_122052941_122055534_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.21	chr3	+	7472	4	NIC	ENSMUSG00000028124.16	novel	877	6	NA	NA	48	-11	intron_retention	FALSE	canonical	3	413	junction_2	52.9591037184984	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGGAAATTTAATGTG	NA	False	NA	5	True	AATAAA	-17	NA	122039408	122060581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122039761_122049193_122049260_122052855_122055577_122056248
ES.22514.22	chr3	+	7159	6	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	91	-760	intron_retention	FALSE	canonical	3	413	junction_2	52.8870494544742	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATATCTAAGCCATAAA	NA	False	NA	NA	False	AATAAA	-12	NA	122039451	122063621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122039761_122049193_122049260_122052855_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.23	chr3	+	5920	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	-5242	-186	-5242	186	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACTAAATAAGAAA	653	False	NA	NA	False	NA	NA	NA	122045134	122051054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122045100_122051100
ES.22514.24	chr3	+	2975	2	NIC	ENSMUSG00000028124.16	novel	495	4	NA	NA	865	-6	intron_retention	FALSE	canonical	3	448	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATTTAATGTGTGTGT	NA	False	NA	10	True	AATAAA	-22	NA	122056292	122060586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122058558_122059876
ES.22514.25	chr3	+	180	1	ISM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	22532	2464	6310	1325	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAATGAGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	122061737	122061917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122061700_122061900
ES.22514.3	chr3	+	1776	6	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	-99	-8	intron_retention	FALSE	canonical	3	27	junction_5	186.5576586474	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAATTTAATGTGTGT	NA	False	NA	8	True	AATAAA	-20	NA	122039106	122060584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122059876
ES.22514.4	chr3	+	1421	7	NNC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	-95	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	187.779495389909	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAATGTGTGTGTTCT	NA	False	NA	13	True	AATAAA	-25	NA	122039110	122060589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039290_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.5	chr3	+	1871	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	-69	3787	-69	2	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGTGTTCTTGCTT	NA	False	NA	18	True	AATAAA	-30	NA	122039136	122060594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.6	chr3	+	3229	1	Genic_Genomic	ENSMUSG00000028124.16	novel	NA	NA	NA	NA	-52	-8238	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCGAGAAAAGCCATGGAG	NA	False	NA	NA	False	NA	NA	NA	122039153	122042382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_122039200_122042400
ES.22514.7	chr3	+	1952	8	NNC	ENSMUSG00000028124.16	novel	1002	8	NA	NA	-28	-5	intron_retention	FALSE	canonical	0	0	junction_3	219.808172398256	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTAATGTGTGTGTT	NA	False	NA	11	True	AATAAA	-23	NA	122039177	122060587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039761_122049193_122049260_122052855_122052941_122055316_122055446_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.8	chr3	+	1944	8	NNC	ENSMUSG00000028124.16	novel	1002	8	NA	NA	-14	-9	intron_retention	FALSE	canonical	0	0	junction_1	226.769054506193	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAATTTAATGTGTG	NA	False	NA	7	True	AATAAA	-19	NA	122039191	122060583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122039761_122039873_122040013_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22514.9	chr3	+	2582	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	41	2966	41	823	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGGTGTCTGAGCTGCT	NA	False	NA	NA	False	AATATA	-22	NA	122039246	122061415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ES.22515.1	chr3	-	390	1	Intergenic	novelGene_18527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAACCCAACT	NA	False	NA	NA	False	NA	NA	NA	122043312	122042922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122042900_122043300
ES.22516.1	chr3	-	3194	1	Intergenic	novelGene_18528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATCTTTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122048985	122045791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122045800_122049000
ES.22517.1	chr3	-	331	1	Antisense	novelGene_ENSMUSG00000028124.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGCACTTTTGATTGT	NA	False	NA	NA	False	AATGAA	-4	NA	122053157	122052826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_122052800_122053200
ES.22517.2	chr3	-	166	1	Intergenic	novelGene_18529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTAATTCTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	122053155	122052989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122053000_122053200
ES.22518.1	chr3	-	2552	1	Antisense	novelGene_ENSMUSG00000028124.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122060783	122058231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_122058200_122060800
ES.22519.1	chr3	+	185	1	Intergenic	novelGene_18530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAATGCATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	122066423	122066608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122066400_122066600
ES.2252.1	chr10	-	3775	1	Antisense	novelGene_ENSMUSG00000040675.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTTATACATCGGGATA	NA	False	NA	NA	False	NA	NA	NA	3983536	3979761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_3979800_3983500
ES.2252.2	chr10	-	126	1	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACGAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	3983535	3983409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_3983400_3983500
ES.22520.1	chr3	+	2657	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	-149	-79	-149	79	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTTAATGTTTGTCA	NA	False	NA	102	True	NA	NA	NA	122067887	122078999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.10	chr3	+	6189	5	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	14	-4	intron_retention	FALSE	canonical	3	1082	junction_4	131.72888825159	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGTGTGCCTCTTGGA	NA	False	NA	19	True	AATAAA	-15	NA	122068050	122078916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.11	chr3	+	1813	8	NNC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	458.217175138424	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068055	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122068128_122068846_122069072_122069660_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.13	chr3	+	2238	8	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-10	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	459.239655544346	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068056	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122069072_122069234_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.14	chr3	+	6732	4	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-10	-8	intron_retention	FALSE	canonical	3	1330	junction_1	48.996598521394	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068056	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122074473_122075977_122076143_122078042
ES.22520.15	chr3	+	2228	8	NNC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-9	33	intron_retention	FALSE	canonical	1	3	junction_2	458.217175138424	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGACATGTCTGGTTAT	NA	False	NA	56	True	AATAAA	-13	NA	122068057	122078953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122068128_122068846_122069448_122069660_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.16	chr3	+	3654	7	NNC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-9	-8	intron_retention	FALSE	canonical	1	3	junction_2	489.163117533973	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068057	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122068128_122068846_122069072_122069660_122070460_122072394_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.17	chr3	+	8248	3	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	118	0	intron_retention	FALSE	canonical	3	1082	junction_2	64.5	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068184	122078920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122070460_122072394_122078153_122078705
ES.22520.18	chr3	+	6425	1	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-1740	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAATTGTGTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	122072485	122078910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122072500_122078900
ES.22520.2	chr3	+	9654	3	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-42	0	intron_retention	FALSE	canonical	3	1082	junction_2	124	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122067994	122078920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122078153_122078705
ES.22520.3	chr3	+	3957	6	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	-23	0	intron_retention	FALSE	canonical	3	1082	junction_5	94.4910577779718	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068013	122078920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122076143_122078042_122078153_122078705
ES.22520.5	chr3	+	3581	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	7	-1159	7	1159	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTGAACTTTTTGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	122068043	122080079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.6	chr3	+	4256	6	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	8	-8	intron_retention	FALSE	canonical	3	1082	junction_5	122.853734171982	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068044	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122070460_122072394_122074473_122075977_122076143_122078042_122078153_122078705
ES.22520.7	chr3	+	4317	6	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	8	-4	intron_retention	FALSE	canonical	3	1082	junction_5	119.085515492019	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGTGTGCCTCTTGGA	NA	False	NA	19	True	AATAAA	-15	NA	122068044	122078916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122078153_122078705
ES.22520.8	chr3	+	5764	5	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	13	0	intron_retention	FALSE	canonical	3	1082	junction_4	105.002380925387	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068049	122078920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122070460_122072394_122076143_122078042_122078153_122078705
ES.22520.9	chr3	+	7656	4	NIC	ENSMUSG00000039756.13	novel	2429	7	NA	NA	13	-8	intron_retention	FALSE	canonical	3	1082	junction_3	101.273008359692	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATTGTGTGCCTCT	NA	False	NA	15	True	AATAAA	-11	NA	122068049	122078912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_122068128_122068846_122070460_122072394_122078153_122078705
ES.22521.1	chr3	+	166	1	Intergenic	novelGene_18531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122117412	122117578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122117400_122117600
ES.22522.1	chr3	-	493	1	Intergenic	novelGene_18532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATACCCACGAGGACA	NA	False	NA	NA	False	NA	NA	NA	122184585	122184092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122184100_122184600
ES.22522.2	chr3	-	224	1	Intergenic	novelGene_18533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCATTGACAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	122184587	122184363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122184400_122184600
ES.22523.1	chr3	+	179	1	Intergenic	novelGene_18534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122209591	122209770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122209600_122209800
ES.22524.1	chr3	+	3404	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	-93	0	-72	0	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCTTTATTATTGA	NA	False	NA	NA	False	AATATA	-22	NA	122213333	122323840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.10	chr3	+	4457	4	NNC	ENSMUSG00000028121.9	novel	766	4	NA	NA	160	-12537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.2457928452731	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAATAGCTCTGAGAG	NA	False	NA	NA	False	GATAAA	-40	NA	122213631	122252713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122213833_122220093_122220404_122248701_122250461_122250526
ES.22524.12	chr3	+	6690	1	Intergenic	novelGene_18535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTACTTGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	122220834	122227524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122220800_122227500
ES.22524.13	chr3	+	2714	11	NNC	ENSMUSG00000028121.9	novel	1011	3	NA	NA	17299	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.7357014628325	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTATCCTGTCTC	NA	False	NA	NA	False	AATATA	-11	NA	122230770	122323829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122230901_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.14	chr3	+	2295	9	NNC	ENSMUSG00000028121.9	novel	3311	12	NA	NA	315	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8861036602162	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTATCCTGTCTC	4483	False	NA	NA	False	AATATA	-11	NA	122298638	122323829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122298671_122301926_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.15	chr3	+	6609	7	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88239	8	-47	-8	intron_retention	FALSE	canonical	3	148	junction_2	12.3648246606609	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTATCCTGTCTCTTT	7510	False	NA	NA	False	AATATA	-14	NA	122301665	122323832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935
ES.22524.16	chr3	+	1809	4	NNC	ENSMUSG00000028121.9	novel	1011	3	NA	NA	-8	949	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	74.3744281023764	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGGGGTCAGTGAGAT	7549	False	NA	NA	False	GATAAA	-16	NA	122301704	122307535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122302221_122304867_122304972_122305999_122307145_122307491
ES.22524.17	chr3	+	2480	8	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88281	13	-5	-13	3prime_fragment	FALSE	canonical	3	148	junction_2	11.5475945016921	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAATTGTATCCTGTC	7552	False	NA	NA	False	AATATA	-9	NA	122301707	122323827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.2	chr3	+	7415	11	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	-33	11	-12	-11	intron_retention	FALSE	canonical	3	116	junction_1	21.8577217477028	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTATCCTGTCTC	NA	False	NA	NA	False	AATATA	-11	NA	122213393	122323829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935
ES.22524.4	chr3	+	3320	12	NNC	ENSMUSG00000028121.9	novel	3311	12	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.6098121701402	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTCTCTTTATTATT	NA	False	NA	NA	False	AATATA	-20	NA	122213394	122323838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301795_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.5	chr3	+	3279	12	NNC	ENSMUSG00000028121.9	novel	3311	12	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.4228385889617	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTATCCTGTCTCTTT	NA	False	NA	NA	False	AATATA	-14	NA	122213394	122323832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122213777_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.6	chr3	+	4674	4	NNC	ENSMUSG00000028121.9	novel	766	4	NA	NA	8	-12537	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	60.2457928452731	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAATAGCTCTGAGAG	NA	False	NA	NA	False	GATAAA	-40	NA	122213413	122252713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122213833_122220093_122220404_122248701_122250467_122250533
ES.22524.7	chr3	+	3372	12	NNC	ENSMUSG00000028121.9	novel	3311	12	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.9654662555238	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTATCCTGTCTC	NA	False	NA	NA	False	AATATA	-11	NA	122213426	122323829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122213833_122220093_122220404_122277529_122277642_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ES.22524.9	chr3	+	2712	7	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	203	16361	158	893	5prime_fragment	FALSE	canonical	3	116	junction_1	17.3749500398962	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTGTAAGATG	NA	False	NA	NA	False	NA	NA	NA	122213629	122307479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999
ES.22525.1	chr3	-	5104	1	Antisense	novelGene_ENSMUSG00000028121.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTAAATGATTCTCAG	NA	False	NA	NA	False	NA	NA	NA	122309607	122304503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_122304500_122309600
ES.22526.1	chr3	+	159	1	Intergenic	novelGene_18536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	122327332	122327491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122327300_122327500
ES.22527.1	chr3	+	2746	8	Intergenic	novelGene_18537	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACATTTATATACAAAGGG	NA	False	NA	NA	False	NA	NA	NA	122338238	122362514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122340043_122340590_122340725_122342804_122342914_122351550_122351755_122352667_122352816_122354481_122354610_122357482_122357591_122362403
ES.22527.2	chr3	+	7230	2	Antisense	novelGene_ENSMUSG00000039735.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAGAAGAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	122338238	122346016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_122340043_122340590
ES.22528.1	chr3	+	3056	1	Intergenic	novelGene_18538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGCTACCTCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	122402847	122405903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122402800_122405900
ES.22528.2	chr3	+	157	1	Intergenic	novelGene_18540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	122404996	122405153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122405000_122405200
ES.22529.1	chr3	-	3952	15	Fusion	ENSMUSG00000039735.17_ENSMUSG00000106365.2	novel	5357	15	NA	NA	-96	0	multi-exon	FALSE	canonical	2	3	junction_14	23.8027609442986	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTACTTATCTTTTAC	NA	False	NA	1	True	AATAAA	-24	NA	122423408	122332367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122423274
ES.22529.10	chr3	-	5305	15	NNC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-11	1	intron_retention	FALSE	canonical	0	0	junction_13	30.4148191592486	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	-4	True	AATAAA	-19	NA	122413375	122332372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122367995_122368091_122383776_122383893_122413178
ES.22529.11	chr3	-	4040	15	NNC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	296	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	23.8027609442986	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	-4	True	AATAAA	-19	NA	122413068	122332372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122412841
ES.22529.12	chr3	-	4332	16	NNC	ENSMUSG00000039735.17	novel	5372	16	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	30.1024915912288	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413161	122332373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122384067_122384268_122412841
ES.22529.13	chr3	-	7433	13	NIC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	25	0	intron_retention	FALSE	canonical	3	68	junction_6	9.70681318570736	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413339	122332373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.15	chr3	-	5115	14	Fusion	ENSMUSG00000039735.17_ENSMUSG00000106365.2	novel	5198	14	NA	NA	-65	0	intron_retention	FALSE	canonical	2	3	junction_13	23.3496702458882	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122423377	122332373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122423274
ES.22529.17	chr3	-	3848	14	NIC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	25.298221281347	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTAAGATGTGTACTTA	NA	False	NA	-7	True	AATAAA	-16	NA	122413363	122332375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.19	chr3	-	4800	3	NIC	ENSMUSG00000039735.17	novel	3553	12	NA	NA	8779	-2	intron_retention	FALSE	canonical	3	47	junction_1	23.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTAAGATGTGTACTTA	NA	False	NA	-7	True	AATAAA	-16	NA	122339982	122332375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122334574_122335773_122338342_122339948
ES.22529.2	chr3	-	4013	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTACTTATCTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	122413375	122332369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.21	chr3	-	2158	7	NIC	ENSMUSG00000039735.17	novel	3553	12	NA	NA	1321	-709	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	15.5848929700813	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGACTGCTTTAATAATT	NA	False	NA	NA	False	NA	NA	NA	122351572	122333082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551
ES.22529.22	chr3	-	4293	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	-11	916	-11	-916	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGTGTCCTGCCGCGC	NA	False	NA	NA	False	NA	NA	NA	122413375	122333289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.23	chr3	-	3078	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	-1	-921	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTCATGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	122413365	122333294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.24	chr3	-	6257	13	NNC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	27	-998	intron_retention	FALSE	canonical	0	0	junction_11	24.6452609823651	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTATGTGCACTTTTACT	NA	False	NA	NA	False	GATAAA	-21	NA	122413337	122333371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383772_122383893_122413178
ES.22529.25	chr3	-	6692	2	FSM	ENSMUSG00000039735.17	ENSMUST00000162884.3	423	2	-4158	-2111	479	2111	multi-exon	FALSE	canonical	3	71	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTTAAAAAGATTAAGT	NA	False	NA	NA	False	NA	NA	NA	122357051	122349446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122351756_122352668
ES.22529.26	chr3	-	7657	3	NNC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	30	-24787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTAACTAACAGTTTAGA	NA	False	NA	NA	False	TATAAA	-41	NA	122413334	122376344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122382107_122382153_122383893_122413178
ES.22529.27	chr3	-	7704	2	ISM	ENSMUSG00000039735.17	ENSMUST00000239148.2	5357	15	-1	44002	-1	-24818	5prime_fragment	FALSE	canonical	3	80	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	TATAAA	-10	NA	122413365	122376375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_122383893_122413178
ES.22529.28	chr3	-	3991	3	NNC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	1	-28482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATATCCGTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	122413363	122380039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122382107_122382153_122383893_122413178
ES.22529.29	chr3	-	1707	1	Intergenic	novelGene_18539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2713	False	NA	NA	False	NA	NA	NA	122406125	122404418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122404400_122406100
ES.22529.3	chr3	-	5273	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	-71	-4	-71	-2	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTACTTATCTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	122413435	122332369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.30	chr3	-	2010	1	Genic_Genomic	ENSMUSG00000106365.2	novel	NA	NA	NA	NA	5401	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	122417911	122415901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_122415900_122417900
ES.22529.31	chr3	-	1788	2	NNC	ENSMUSG00000106365.2	novel	396	2	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATACAGCTCAATGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	122423355	122420862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122422575_122423279
ES.22529.32	chr3	-	460	2	FSM	ENSMUSG00000106365.2	ENSMUST00000198040.2	396	2	-94	30	-94	-30	multi-exon	FALSE	canonical	2	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	122423406	122420889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122421218_122423274
ES.22529.4	chr3	-	4986	12	NIC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	-60	-2	intron_retention	FALSE	canonical	0	0	junction_6	25.9522766083638	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTACTTATCTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	122413424	122332369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ES.22529.5	chr3	-	2779	6	NNC	ENSMUSG00000039735.17	novel	3553	12	NA	NA	5856	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2499645389893	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATGTGTACTTATCTT	NA	False	NA	-3	True	AATAAA	-20	NA	122342905	122332371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122334574_122335833_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804
ES.22529.6	chr3	-	4048	16	Fusion	ENSMUSG00000039735.17_ENSMUSG00000106365.2	novel	5372	16	NA	NA	-68	1	multi-exon	FALSE	canonical	1	1	junction_14	29.6400629778908	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	-4	True	AATAAA	-19	NA	122423380	122332372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122416435_122416565_122423274
ES.22529.7	chr3	-	3612	13	NNC	ENSMUSG00000039735.17	novel	5198	14	NA	NA	-7056	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.318033530051	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	8247	False	NA	-4	True	AATAAA	-19	NA	122364586	122332372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122334574_122335773_122335933_122338270_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539
ES.22529.9	chr3	-	4253	16	NNC	ENSMUSG00000039735.17	novel	5372	16	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	28.5247650686596	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGTGTACTTATCT	NA	False	NA	-4	True	AATAAA	-19	NA	122413388	122332372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122363642_122363873_122364539_122364594_122383776_122383893_122413178
ES.2253.1	chr10	-	5285	1	Antisense	novelGene_ENSMUSG00000040675.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACCACCCCCCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	4059931	4054646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4054600_4059900
ES.22530.1	chr3	-	190	1	Intergenic	novelGene_18541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGTCAATACCAAGTG	NA	False	NA	NA	False	NA	NA	NA	122442677	122442487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122442500_122442700
ES.22531.1	chr3	-	177	1	Intergenic	novelGene_18542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122443167	122442990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122443000_122443200
ES.22532.1	chr3	+	178	1	Intergenic	novelGene_18543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGGGGGGGGCGG	NA	False	NA	NA	False	NA	NA	NA	122451637	122451815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122451600_122451800
ES.22533.1	chr3	-	1009	5	Intergenic	novelGene_18544	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTCCTGCCAACAGT	NA	False	NA	NA	False	AATAAA	-13	NA	122477960	122455794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122456152_122457726_122457862_122458780_122458890_122459901_122459995_122477645
ES.22534.1	chr3	+	4105	22	NNC	ENSMUSG00000053965.11	novel	6939	21	NA	NA	44	-2455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	2.23556087510581	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTCAACATGGTCAT	NA	False	NA	NA	False	ATTAAA	-29	NA	122522639	122650566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646271_122648843_122649614_122649946
ES.22534.10	chr3	+	2960	13	ISM	ENSMUSG00000053965.11	ENSMUST00000200389.2	7603	21	240	35831	240	16415	5prime_fragment	FALSE	canonical	0	0	junction_1	2.45373864405591	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTAACATCATGTTACA	NA	False	NA	NA	False	AATAAA	-17	NA	122523458	122617190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122524306_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704
ES.22534.11	chr3	+	2556	13	NNC	ENSMUSG00000053965.11	novel	7603	21	NA	NA	284	674	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.8710721961587	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGCCTGTATCC	NA	False	NA	NA	False	ATTAAA	-14	NA	122523502	122601449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122524306_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122600806_122600917_122601286
ES.22534.12	chr3	+	3548	18	ISM	ENSMUSG00000053965.11	ENSMUST00000200389.2	7603	21	576	15406	-76	-15406	5prime_fragment	FALSE	canonical	0	0	junction_1	2.29788529230878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTCTCATTTACAT	NA	False	NA	NA	False	NA	NA	NA	122523794	122637615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122524306_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693
ES.22534.13	chr3	+	2370	14	ISM	ENSMUSG00000053965.11	ENSMUST00000200389.2	7603	21	639	34289	-13	17957	5prime_fragment	FALSE	canonical	0	0	junction_1	2.40315374643282	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGTATAAAGA	NA	False	NA	NA	False	AAGAAA	-45	NA	122523857	122618732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122524306_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563
ES.22534.14	chr3	+	2680	2	Intergenic	novelGene_18545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCGGGTCAACCTGTGA	NA	False	NA	NA	False	NA	NA	NA	122636866	122640264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122639428_122640145
ES.22534.2	chr3	+	4720	18	NNC	ENSMUSG00000053965.11	novel	7603	21	NA	NA	44	-15391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.29788529230878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTCCCGTTTCCGTCTC	NA	False	NA	NA	False	NA	NA	NA	122522639	122637630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122524306_122541535_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693
ES.22534.3	chr3	+	6562	22	NNC	ENSMUSG00000053965.11	novel	6939	21	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	2.23556087510581	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGGTGTGATCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	122522639	122653023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646271_122648843_122649614_122649946
ES.22534.4	chr3	+	2799	20	ISM	ENSMUSG00000053965.11	ENSMUST00000066728.10	6939	21	72	6641	72	-6639	5prime_fragment	FALSE	canonical	1	1	junction_8	2.08941402539781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATAATAATTA	NA	False	NA	NA	False	NA	NA	NA	122522667	122646382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186
ES.22534.5	chr3	+	3329	18	ISM	ENSMUSG00000053965.11	ENSMUST00000066728.10	6939	21	129	15408	129	-15406	5prime_fragment	FALSE	canonical	1	1	junction_8	2.09299374995967	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTCTCATTTACAT	NA	False	NA	NA	False	NA	NA	NA	122522724	122637615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693
ES.22534.6	chr3	+	2958	19	NNC	ENSMUSG00000053965.11	novel	6939	21	NA	NA	223	-2468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2.40370085030933	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTCTGTTTAAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	122522818	122650553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611572_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636735_122649946
ES.22534.7	chr3	+	6477	21	NNC	ENSMUSG00000053965.11	novel	6939	21	NA	NA	230	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.17025344142107	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTGTGTGGTGTGAT	NA	False	NA	NA	False	AATAAA	-11	NA	122522825	122653018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122523017_122541537_122542127_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646271_122648843_122649798_122649934
ES.22534.8	chr3	+	5531	21	NNC	ENSMUSG00000053965.11	novel	6939	21	NA	NA	235	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	2.21076909694341	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTGGTGTGATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	122522830	122653021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646196_122649939
ES.22534.9	chr3	+	6673	21	FSM	ENSMUSG00000053965.11	ENSMUST00000066728.10	6939	21	264	2	264	0	multi-exon	FALSE	canonical	1	1	junction_8	2.13541565040626	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTGGTGTGATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	122522859	122653021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122523017_122541537_122542127_122554526_122554617_122568201_122568274_122569904_122569995_122572583_122572722_122575215_122575284_122587908_122588018_122588882_122588971_122596680_122596857_122598198_122598259_122611569_122611717_122616704_122616831_122618563_122618659_122629201_122629290_122633190_122633292_122634619_122634698_122636693_122636758_122645298_122645374_122646186_122646271_122648843
ES.22535.1	chr3	-	1819	1	Intergenic	novelGene_18546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAGATAAC	NA	False	NA	NA	False	NA	NA	NA	122674838	122673019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_122673000_122674800
ES.22536.1	chr3	+	505	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	184	471	184	-471	multi-exon	FALSE	canonical	3	1657	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATGGGAAATAAATGTA	NA	False	NA	84	True	AATATA	-29	NA	122718035	122719362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_122718306_122719127
ES.22537.1	chr3	+	1985	1	Intergenic	novelGene_18547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACTAAGAAAGAAAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	122758145	122760130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122758100_122760100
ES.22538.1	chr3	+	148	1	Intergenic	novelGene_18548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	122772980	122773128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122773000_122773100
ES.22539.1	chr3	-	6823	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	60	-698	21	698	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGAGGGTGGAATGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	122778099	122724443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.10	chr3	-	5955	17	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	46	-308	combination_of_known_splicesites	FALSE	canonical	3	5	junction_16	15.1377786927277	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTGGTCTTTTCTTTGC	NA	False	NA	NA	False	AAAACA	-27	NA	122778074	122725449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122776333_122776497_122777930
ES.22539.11	chr3	-	7563	2	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	43755	308	8872	-308	3prime_fragment	FALSE	canonical	3	60	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTGGTCTTTTCTTTGC	NA	False	NA	NA	False	AAAACA	-27	NA	122734404	122725449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_122728245_122729636
ES.22539.12	chr3	-	5894	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	48	-311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	16.4981059518964	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATAGCTGGTCTTTTCTT	NA	False	NA	NA	False	AAAACA	-24	NA	122778072	122725452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122763500_122763608_122777930
ES.22539.14	chr3	-	5636	15	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	47	-313	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	13.3372655766174	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTATAGCTGGTCTTTTC	NA	False	NA	NA	False	AAAACA	-22	NA	122778073	122725454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.15	chr3	-	5723	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	-14	-315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.3505043154371	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTATAGCTGGTCTTT	NA	False	NA	NA	False	AAAACA	-20	NA	122777986	122725456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744981_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755087_122756528_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.16	chr3	-	5767	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	40	-315	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	12.7010060843838	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTATAGCTGGTCTTT	NA	False	NA	NA	False	AAAACA	-20	NA	122778080	122725456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754827_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.17	chr3	-	6040	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	1	-316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	16.0661474457942	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTATAGCTGGTCTT	NA	False	NA	NA	False	AAAACA	-19	NA	122778152	122725457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762910_122776329_122776497_122777930
ES.22539.18	chr3	-	5700	15	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	47	-316	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	13.668823456826	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTATAGCTGGTCTT	NA	False	NA	NA	False	AAAACA	-19	NA	122778073	122725457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.19	chr3	-	6792	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	-16	-316	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	15.8806660929432	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTATAGCTGGTCTT	NA	False	NA	NA	False	AAAACA	-19	NA	122777558	122725457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756595_122757903_122757997_122762237_122762899_122776333
ES.22539.2	chr3	-	6852	18	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.1395970930713	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGGAGTAGGATGTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	122778076	122725142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122772537_122773126_122776333_122776497_122777930
ES.22539.20	chr3	-	6330	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	11	-319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.8035524517883	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGCAGTATAGCTGGT	NA	False	NA	NA	False	AAAACA	-16	NA	122778109	122725460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122772611_122773126_122777930
ES.22539.21	chr3	-	5708	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	44	-321	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	12.6673684016145	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGCAGTATAGCTG	NA	False	NA	NA	False	AAAACA	-14	NA	122778076	122725462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756595_122757903_122757997_122762237_122762899_122777930
ES.22539.22	chr3	-	4332	10	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	3786	-322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	16.6599986661331	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTTAAGCAGTATAGCT	NA	False	NA	NA	False	AAAACA	-13	NA	122751312	122725463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744845_122744886_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233
ES.22539.23	chr3	-	3440	5	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	33206	704	-1677	-704	3prime_fragment	FALSE	canonical	3	39	junction_2	7.84219357067906	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCCCTGTTGGGAATG	NA	False	NA	NA	False	TTTAAA	-37	NA	122744953	122725845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819
ES.22539.24	chr3	-	5218	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	85	882	46	-882	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAACAGCTTTTAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	122778074	122726023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.25	chr3	-	4658	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	29	-1566	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	16.4981059518964	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAAATGTGAAAGGTC	NA	False	NA	NA	False	AATAAA	-41	NA	122778091	122726707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122763500_122763608_122777930
ES.22539.26	chr3	-	4761	18	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	65	-1590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.261082334508	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTAAATTATTTTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	122778055	122726731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122763500_122763608_122776333_122776497_122777930
ES.22539.27	chr3	-	4433	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	49	-1591	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	12.6673684016145	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTAAATTATTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	122778071	122726732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756595_122757903_122757997_122762237_122762899_122777930
ES.22539.28	chr3	-	4399	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	190	1596	3	-1596	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTATTTATTAAATTAT	NA	False	NA	NA	False	AATAAA	-11	NA	122777969	122726737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.29	chr3	-	4089	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	1	2095	1	-2095	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTACTAAATATTTTAGA	NA	False	NA	NA	False	AATAAA	-26	NA	122778158	122727236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.3	chr3	-	5985	15	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	13.0995014704954	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGGAGTAGGATGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	122778096	122725143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122757903_122757997_122762237_122762899_122777930
ES.22539.30	chr3	-	3920	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	46	-2107	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	12.6673684016145	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATGATAAACTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	122778074	122727248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756595_122757903_122757997_122762237_122762899_122777930
ES.22539.31	chr3	-	4082	16	NNC	ENSMUSG00000039701.12	novel	1882	13	NA	NA	39	-3156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.8367527911938	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGTTTCCTCTGTGGT	NA	False	NA	NA	False	ATTAAA	-14	NA	122778081	122728297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122729376_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.32	chr3	-	4310	14	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	82	14461	43	1243	5prime_fragment	FALSE	canonical	3	36	junction_3	5.69957955472083	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTGAGCCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	122778077	122739602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.33	chr3	-	4503	13	ISM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	58	15978	19	-274	5prime_fragment	FALSE	canonical	3	36	junction_2	5.52016505389306	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATATGCTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	122778101	122741119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.34	chr3	-	4577	14	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	50	-276	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	17.0293863659264	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGATATGCTTGGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	122778070	122741121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122763500_122763608_122777930
ES.22539.35	chr3	-	1898	8	FSM	ENSMUSG00000039701.12	ENSMUST00000199923.5	1984	8	88	-2	49	2	multi-exon	FALSE	canonical	3	36	junction_5	4.92391083988974	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAATGTTTCTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	122778071	122750815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.4	chr3	-	4836	12	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	48	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.92482769898	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATGGAGTAGGATGTG	NA	False	NA	NA	False	AATAAA	-13	NA	122778072	122725144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728055_122746223_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.5	chr3	-	5873	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	7	305	1	-305	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTTTTCTTTGCATT	NA	False	NA	NA	False	AAAACA	-30	NA	122778152	122725446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.6	chr3	-	6007	17	NIC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	-7	-307	combination_of_known_junctions	TRUE	canonical	2	3	junction_16	15.4463537364001	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTCTTTTCTTTGCA	NA	False	NA	NA	False	AAAACA	-28	NA	122777549	122725448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122776333_122776497_122777354
ES.22539.7	chr3	-	5835	16	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	-4	-307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.5029214945836	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTCTTTTCTTTGCA	NA	False	NA	NA	False	AAAACA	-28	NA	122778163	122725448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746875_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ES.22539.8	chr3	-	6031	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	-16	-307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	16.3543524405584	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTCTTTTCTTTGCA	NA	False	NA	NA	False	AAAACA	-28	NA	122777558	122725448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762910_122776329_122776497_122777354
ES.22539.9	chr3	-	5832	17	NNC	ENSMUSG00000039701.12	novel	6185	16	NA	NA	47	-307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	16.6516468780118	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGGTCTTTTCTTTGCA	NA	False	NA	NA	False	AAAACA	-28	NA	122778073	122725448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762910_122776329_122776359_122777930
ES.2254.1	chr10	-	3794	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGTCTAGGCATAGT	NA	False	NA	NA	False	CATAAA	-31	NA	4064089	4060295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4060300_4064100
ES.22540.1	chr3	+	321	1	Intergenic	novelGene_18549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCAGTTAGTATTTGTC	NA	False	NA	34	True	AATAAA	-23	NA	122778347	122778668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_122778300_122778700
ES.22541.1	chr3	-	184	1	Intergenic	novelGene_18550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATAATCTT	8882	False	NA	NA	False	NA	NA	NA	123026087	123025903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_123025900_123026100
ES.22542.1	chr3	+	4648	25	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2673	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24.8359897908034	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123058430	123159290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123060630_123061186_123061838_123061987_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.11	chr3	+	5777	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2653	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.8981688039234	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123058450	123159290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144440_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.12	chr3	+	4480	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2651	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	17.9836094246819	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTTTATGTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	123058452	123159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123060630_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.13	chr3	+	4357	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2645	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.1453905575965	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTACTGTGTTTTATGT	NA	False	NA	16	True	AATAAA	-16	NA	123058458	123159288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123060743_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.14	chr3	+	5684	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2641	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.1453905575965	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	False	NA	12	True	AATAAA	-12	NA	123058462	123159284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059408_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.15	chr3	+	4784	11	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	-19	25811	-19	3058	5prime_fragment	FALSE	canonical	3	54	junction_9	9.62340895940726	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTGCACACGTCAG	NA	False	NA	NA	False	GATAAA	-18	NA	123061084	123133479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134
ES.22542.17	chr3	+	3733	22	NIC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.9874048239909	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTTTATGTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	123061126	123159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_123061186_123063242_123063403_123072793_123072918_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.18	chr3	+	3661	25	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	22.570222208821	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTACTGTGTTTTATG	NA	False	NA	15	True	AATAAA	-15	NA	123061154	123159287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469_123158782_123158853_123159058_123159173
ES.22542.2	chr3	+	6199	26	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2673	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	28.9401036625649	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTACTGTGTTTTATGT	NA	False	NA	16	True	AATAAA	-16	NA	123058430	123159288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123061838_123061987_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123100329_123100494_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.21	chr3	+	2485	13	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	69025	4	-825	1	3prime_fragment	FALSE	canonical	3	56	junction_5	11.139269874338	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTACTGTGTTTTAT	NA	False	NA	14	True	AATAAA	-14	NA	123130128	123159286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.22	chr3	+	1950	9	ISM	ENSMUSG00000039234.12	ENSMUST00000197291.5	3649	20	60300	2	-4127	-2	3prime_fragment	FALSE	canonical	3	56	junction_1	12.8330627677106	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTTACTGTGTTT	NA	False	NA	11	True	AATAAA	-11	NA	123144346	123159283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.23	chr3	+	2433	1	FSM	ENSMUSG00000039234.12	ENSMUST00000196482.2	923	1	-1511	1	-1511	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	False	NA	12	True	AATAAA	-12	NA	123156851	123159284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_123156900_123159300
ES.22542.3	chr3	+	5947	25	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2673	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.656775888632	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123058430	123159290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123116290_123116349_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.4	chr3	+	5467	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2658	-402	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	15.8213084042354	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAGCCTCAATTTTC	NA	False	NA	NA	False	CATAAA	-18	NA	123058445	123158883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.5	chr3	+	3931	23	NNC	ENSMUSG00000039234.12	novel	3649	20	NA	NA	-2657	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.1403964230813	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTTTATGTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	123058446	123159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.6	chr3	+	5741	23	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2656	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	21.3555110273594	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	False	NA	12	True	AATAAA	-12	NA	123058447	123159284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.8	chr3	+	5874	24	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2656	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	15.8213084042354	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTTTATGTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	123058447	123159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22542.9	chr3	+	6036	25	NNC	ENSMUSG00000039234.12	novel	3903	23	NA	NA	-2656	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.656775888632	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123058447	123159290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_123058555_123059241_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123100329_123100494_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ES.22543.1	chr3	-	2635	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	108	-2	-15	2	multi-exon	TRUE	canonical	3	213	junction_2	25.8534330408942	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTTTTCCTTAGATG	NA	False	NA	0	True	AATAAA	-19	NA	123179649	123161943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.10	chr3	-	2456	10	NNC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.625773828336	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123179632	123161947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123179479
ES.22543.15	chr3	-	4846	4	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	9010	5	-2267	-5	intron_retention	FALSE	canonical	3	213	junction_2	15.06283137026	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTAAGTTTGTTTTCC	NA	False	NA	-7	True	AATAAA	-12	NA	123170747	123161950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618
ES.22543.16	chr3	-	2296	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	137	308	14	-308	multi-exon	FALSE	canonical	3	213	junction_2	25.8534330408942	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGACAAACATCTTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	123179620	123162253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.17	chr3	-	2414	10	FSM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	125	1663	71	-488	multi-exon	FALSE	canonical	3	213	junction_1	26.0261027564896	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGGTATTCTAACAACA	NA	False	NA	NA	False	ATTAAA	-11	NA	123179509	123163608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.18	chr3	-	3076	5	ISM	ENSMUSG00000028114.17	ENSMUST00000090371.14	7197	7	-21	9384	-21	8036	5prime_fragment	FALSE	canonical	3	240	junction_4	18.3371208208922	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAAATAGTTTGCTTAT	NA	False	NA	NA	False	AAAAAG	-4	NA	123179601	123171329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.19	chr3	-	3420	4	NIC	ENSMUSG00000028114.17	novel	4202	10	NA	NA	3	8010	intron_retention	FALSE	canonical	3	240	junction_3	11.6714276000077	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123179631	123171355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.2	chr3	-	3369	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	213	junction_2	27.1406942422374	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	-2	True	AATAAA	-17	NA	123179632	123161945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123177334_123179410
ES.22543.20	chr3	-	4969	1	NIC	ENSMUSG00000028114.17	novel	7197	7	NA	NA	3256	8010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123176324	123171355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_123171400_123176300
ES.22543.6	chr3	-	4980	10	NNC	ENSMUSG00000028114.17	novel	4202	10	NA	NA	7	-2	intron_retention	FALSE	canonical	2	12	junction_1	83.2209612721562	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123179627	123161947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_123165922_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22543.7	chr3	-	2609	11	NNC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.2031629561783	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123179609	123161947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176510_123177244_123177334_123179410
ES.22543.8	chr3	-	5451	5	ISM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	7929	2	-3225	-2	3prime_fragment	FALSE	canonical	3	213	junction_1	24.5560583156173	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123171705	123161947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793
ES.22543.9	chr3	-	2396	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	76.5041756304118	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	False	NA	-4	True	AATAAA	-15	NA	123179625	123161947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_123163340_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ES.22544.1	chr3	-	155	1	Intergenic	novelGene_18551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	5657	False	NA	NA	False	NA	NA	NA	123230488	123230333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_123230300_123230500
ES.22545.1	chr3	-	1276	1	Antisense	novelGene_ENSMUSG00000105058.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	123266742	123265466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_123265500_123266700
ES.22546.1	chr3	-	415	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	28	5	28	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGACTGTGTCCTGTTT	NA	False	NA	43	True	AATAAA	-16	NA	123302025	123301205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_123301310_123301465_123301512_123301760
ES.22546.2	chr3	-	388	1	FSM	ENSMUSG00000104960.2	ENSMUST00000198509.2	776	1	386	2	386	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGACTGTGTCCTGTTT	NA	False	NA	43	True	AATAAA	-16	NA	123301593	123301205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_123301200_123301600
ES.22547.1	chr3	+	2209	1	Antisense	novelGene_ENSMUSG00000104670.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCATGTCCTTCTGT	8429	False	NA	NA	False	TTTAAA	-6	NA	123302211	123304420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_123302200_123304400
ES.22548.1	chr3	+	1751	1	FSM	ENSMUSG00000044528.6	ENSMUST00000058994.6	3889	1	251	1887	251	-1887	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGTGTGGTGATATTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	124114754	124116505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_124114800_124116500
ES.22549.1	chr3	+	1194	1	FSM	ENSMUSG00000096544.3	ENSMUST00000178993.3	331	1	-158	-705	-158	705	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACACTCTTTTAGTATA	NA	False	NA	100	True	NA	NA	NA	124179157	124180351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_124179200_124180400
ES.2255.1	chr10	+	131	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	4153888	4154019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4153900_4154000
ES.22550.1	chr3	-	159	1	Intergenic	novelGene_18552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	125212172	125212013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_125212000_125212200
ES.22551.1	chr3	-	3790	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-97	47	-97	-47	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGGATCTTTAAGTTCT	NA	False	NA	NA	False	AATAAA	-36	NA	125732365	125658966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
ES.22551.2	chr3	-	3740	6	NNC	ENSMUSG00000032854.13	novel	3740	6	NA	NA	-28	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.46219776856141	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACACGGATCTTTAAGT	NA	False	NA	NA	False	AATAAA	-33	NA	125732296	125658969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708264_125709111_125732101
ES.22551.3	chr3	-	2863	5	NIC	ENSMUSG00000032854.13	novel	3740	6	NA	NA	1	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	7.15454401062709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAACACGGATCTTTAA	NA	False	NA	NA	False	AATAAA	-31	NA	125732267	125658971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125732101
ES.22551.4	chr3	-	3558	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	-59	241	-59	-6	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGTTGTTGGAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	125732327	125659160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
ES.22551.5	chr3	-	3383	6	NNC	ENSMUSG00000032854.13	novel	3740	6	NA	NA	127	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	6.18384993349612	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAAATGTTGTTGGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	125732073	125659162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732020
ES.22551.6	chr3	-	3423	6	NNC	ENSMUSG00000032854.13	novel	3740	6	NA	NA	-12	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.46219776856141	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAACTTAAA	NA	False	NA	NA	False	AATAGA	-45	NA	125732212	125659202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708264_125709111_125732101
ES.22552.1	chr3	+	4269	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	-156	1411	-100	0	multi-exon	TRUE	canonical	2	3	junction_9	3.34119443416775	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCATTTTTATTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	126390499	126638564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ES.22552.10	chr3	+	3850	21	NIC	ENSMUSG00000053819.17	novel	5396	21	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4.45645599103144	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGTCCATTTTTATT	NA	False	NA	7	True	AATAAA	-17	NA	126391086	126638560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126565422_126565496_126573549_126573649_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ES.22552.2	chr3	+	5602	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	-84	6	-28	-6	multi-exon	FALSE	canonical	2	3	junction_9	3.34119443416775	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATCATGTCTTTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	126390571	126639969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ES.22552.3	chr3	+	4056	18	FSM	ENSMUSG00000053819.17	ENSMUST00000106400.9	2722	18	-124	-1210	13	0	multi-exon	FALSE	canonical	1	3	junction_9	3.31714639526393	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATTTTTATTTC	NA	False	NA	9	True	AATAAA	-19	NA	126390621	126638562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
ES.22552.5	chr3	+	4081	18	NIC	ENSMUSG00000053819.17	novel	5524	19	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.015540744912	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATGTGTCCATTTTTAT	NA	False	NA	6	True	AATAAA	-16	NA	126390622	126638559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_126391154_126392714_126392810_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ES.22552.6	chr3	+	4059	18	NIC	ENSMUSG00000053819.17	novel	5524	19	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.03102157623807	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGTGTCCATTTTTA	NA	False	NA	5	True	AATAAA	-15	NA	126390630	126638558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ES.22552.7	chr3	+	1874	9	ISM	ENSMUSG00000053819.17	ENSMUST00000145454.8	3178	19	-20	57938	2	0	5prime_fragment	FALSE	canonical	0	0	junction_6	3.7059917700934	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATATCCT	NA	False	NA	NA	False	NA	NA	NA	126390648	126578421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126573549_126573649_126574008_126574112_126577603
ES.22552.9	chr3	+	5409	18	FSM	ENSMUSG00000053819.17	ENSMUST00000106400.9	2722	18	-66	-2621	-4	-2	multi-exon	FALSE	canonical	1	3	junction_9	3.31714639526393	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTCTTTTGTGGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	126390679	126639973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
ES.22553.1	chr3	+	178	1	Intergenic	novelGene_18553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCAGGATTG	NA	False	NA	NA	False	NA	NA	NA	126664058	126664236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_126664100_126664200
ES.22554.1	chr3	+	4976	1	Intergenic	novelGene_18554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACAAACAACGCCCCCC	NA	False	NA	NA	False	AAAACA	-9	NA	127107363	127112339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127107400_127112300
ES.22555.1	chr3	+	2893	1	Intergenic	novelGene_18556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCGTCTCAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	127168536	127171429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127168500_127171400
ES.22556.1	chr3	-	5776	25	FSM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	4	-5	4	5	multi-exon	FALSE	canonical	2	3	junction_24	9.47034846243791	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGGTGGTTTTGTCCTT	NA	False	NA	0	True	AATAAA	-21	NA	126792107	126715255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126791972
ES.22556.10	chr3	-	1517	1	FSM	ENSMUSG00000032826.20	ENSMUST00000182588.5	2359	1	90	752	90	-752	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAACAGTATACGTTTT	NA	False	NA	NA	False	NA	NA	NA	126717531	126716014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_126716000_126717500
ES.22556.11	chr3	-	4727	28	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-12424	489	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	8.98024046408931	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCACCATGTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	126804535	126716484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502
ES.22556.12	chr3	-	6346	45	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-12	12	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.98331212272037	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTTAATTATGATATT	2184	False	NA	NA	False	AATAAA	-21	NA	127202659	126716961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.13	chr3	-	6567	46	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	11	12	combination_of_known_junctions	FALSE	canonical	2	11	junction_43	8.03553834806417	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTTAATTATGATATT	2146	False	NA	NA	False	AATAAA	-21	NA	127202697	126716961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.14	chr3	-	6576	45	NNC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-17	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.97773865136992	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGTTAATTATGATA	2118	False	NA	NA	False	AATAAA	-19	NA	127202725	126716963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126746117_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.15	chr3	-	5885	39	NNC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	9.86599970294466	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGTTAATTATGATA	4508	False	NA	NA	False	AATAAA	-19	NA	126918522	126716963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806997_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_126918155
ES.22556.16	chr3	-	4029	25	NIC	ENSMUSG00000032826.20	novel	5775	25	NA	NA	2	8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	11.2237347715554	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAATGGTTAATTATGA	NA	False	NA	NA	False	AATAAA	-17	NA	126792085	126716965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126791972
ES.22556.17	chr3	-	5562	38	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-23995	8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	8.80533738131772	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAATGGTTAATTATGA	NA	False	NA	NA	False	AATAAA	-17	NA	126841892	126716965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830
ES.22556.18	chr3	-	3432	23	ISM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	39	7871	15	3713	5prime_fragment	FALSE	canonical	2	3	junction_22	9.84728430911096	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATGTGTGTCATGAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	126792072	126723131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126791972
ES.22556.19	chr3	-	5894	44	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-11	3713	combination_of_known_junctions	FALSE	canonical	2	11	junction_41	8.19667650201868	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATGTGTGTCATGAAGA	2216	False	NA	NA	False	AATAAA	-19	NA	127202627	126723131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.2	chr3	-	8374	43	NIC	ENSMUSG00000032826.20	novel	12413	46	NA	NA	20	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_42	9.46086341239194	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGGTGGTTTTGTCCTT	NA	False	NA	0	True	AATAAA	-21	NA	126955975	126715255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_126955327
ES.22556.20	chr3	-	1091	6	ISM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	60625	8054	-2720	3530	internal_fragment	FALSE	canonical	3	29	junction_4	6.79411510058521	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	NA	False	NA	NA	False	AAAACA	-7	NA	126731486	126723314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386
ES.22556.21	chr3	-	4195	3	ISM	ENSMUSG00000032826.20	ENSMUST00000182547.8	2428	16	32	219410	-1	-84540	5prime_fragment	FALSE	canonical	3	12	junction_1	7	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTGCCTGATACAACC	2195	False	NA	NA	False	NA	NA	NA	127202648	127037902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_127041882_127132780_127132842_127202493
ES.22556.22	chr3	-	1615	1	Intergenic	novelGene_18555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAAAACTCTGAAAAT	1023	False	NA	NA	False	NA	NA	NA	127161538	127159923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127159900_127161500
ES.22556.23	chr3	-	681	1	Intergenic	novelGene_18557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAGAACAATA	NA	False	NA	NA	False	NA	NA	NA	127177222	127176541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127176500_127177200
ES.22556.24	chr3	-	1005	1	Intergenic	novelGene_18558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTTTTTTTTCCCTT	1060	False	NA	NA	False	AATAAA	-16	NA	127193597	127192592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127192600_127193600
ES.22556.3	chr3	-	8231	46	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	2	11	junction_43	8.03553834806417	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTGGTGGTTTTGTCCT	2187	False	NA	-1	True	AATAAA	-20	NA	127202656	126715256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.4	chr3	-	8162	44	NNC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	22940	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	8.49044256367049	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTGGTGGTTTTGTCC	1975	False	NA	-2	True	AATAAA	-19	NA	126996556	126715257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_126996301
ES.22556.6	chr3	-	8170	46	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	9.00222194794152	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGCAGTGGTGGTTT	2227	False	NA	-7	True	AATAAA	-14	NA	127202616	126715262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770582_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.7	chr3	-	8032	45	NIC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.98331212272037	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGCAGTGGTGGTTT	2197	False	NA	-7	True	AATAAA	-14	NA	127202646	126715262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_126717621_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127041782_127041882_127132780_127132842_127202493
ES.22556.9	chr3	-	8227	46	NNC	ENSMUSG00000032826.20	novel	14305	46	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.4400936564552	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTTGCAGTGGTGGT	2230	False	NA	-9	True	AATAAA	-12	NA	127202613	126715264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126746117_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126792525_126792625_126796326_126796426_126797593_126797693_126804502_126804701_126806321_126806421_126806887_126806987_126810464_126810663_126816940_126817040_126822867_126822967_126823123_126823223_126825764_126825963_126832395_126832495_126840373_126840473_126841830_126841930_126846336_126846523_126850641_126850741_126871150_126871250_126873546_126873646_126898409_126898512_127037868_127037918_127041782_127041882_127132780_127132842_127202493
ES.22557.1	chr3	+	177	1	Intergenic	novelGene_18559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	127219582	127219759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127219600_127219800
ES.22558.1	chr3	-	155	2	Intergenic	novelGene_18560	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAACAAATCTTAA	4778	False	NA	NA	False	NA	NA	NA	127236016	127228763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127228825_127235922
ES.22558.2	chr3	-	176	1	Intergenic	novelGene_18561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	4776	False	NA	NA	False	NA	NA	NA	127236018	127235842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127235800_127236000
ES.22559.1	chr3	+	166	2	Antisense	novelGene_ENSMUSG00000032826.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAATAAATAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	127237405	127251657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_127237475_127251560
ES.22559.2	chr3	+	172	1	Intergenic	novelGene_18562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127238644	127238816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127238600_127238800
ES.22559.3	chr3	+	188	1	Intergenic	novelGene_18563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	127251490	127251678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127251500_127251700
ES.2256.1	chr10	+	219	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGGAAGTGTCTTCGG	NA	False	NA	NA	False	NA	NA	NA	4172606	4172825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4172600_4172800
ES.22560.1	chr3	+	237	1	Intergenic	novelGene_18564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATACATCGATGATTT	NA	False	NA	NA	False	NA	NA	NA	127273491	127273728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_127273500_127273700
ES.22561.1	chr3	-	134	1	Intergenic	novelGene_18565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	2705	False	NA	NA	False	NA	NA	NA	127279755	127279621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127279600_127279800
ES.22562.1	chr3	+	3640	6	NNC	ENSMUSG00000051278.13	novel	7153	25	NA	NA	-462	-321	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.6953179415417	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCATATGTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	127346675	127358166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346856_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.10	chr3	+	5689	25	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-430	-1362	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.6654411433403	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTTTGGTATTGCA	NA	False	NA	NA	False	AGTAAA	-15	NA	127346707	127409272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346980_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085
ES.22562.11	chr3	+	6971	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-422	-434	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.2933509049315	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCAGGTAGAAAAAAATG	NA	False	NA	NA	False	AATAAA	-13	NA	127346715	127411231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346856_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.12	chr3	+	3696	6	NNC	ENSMUSG00000051278.13	novel	7153	25	NA	NA	-393	-320	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	27.0451474390509	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATATGTGTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	127346744	127358167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346980_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.13	chr3	+	983	6	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-207	-3458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0544316757358	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAAATACCAAAT	NA	False	NA	NA	False	NA	NA	NA	127346930	127355029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347095_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
ES.22562.14	chr3	+	4003	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-199	0	-55	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTATGTATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	127347082	127358487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.15	chr3	+	4130	7	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.0129901098807	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTATGTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	127347084	127358486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354221_127354352_127354544_127354731_127355123
ES.22562.16	chr3	+	7549	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	22.5920339943087	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTCTTATGTGGAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	127347106	127411668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.17	chr3	+	5404	21	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-31	-5168	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	21.0439421211901	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCCGTGTCTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	127347106	127405466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432
ES.22562.18	chr3	+	7127	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-28	-416	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	22.5920339943087	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTCTTAATCCTAATT	NA	False	NA	NA	False	AATAAA	-31	NA	127347109	127411249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.19	chr3	+	4127	6	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-25	197	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	27.0880047253392	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGTTAAGTTTGATA	NA	False	NA	NA	False	AGTAAA	-23	NA	127347112	127358684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123
ES.22562.2	chr3	+	4067	8	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-462	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.2017791224822	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGTTTATGTATGTGC	NA	False	NA	NA	False	NA	NA	NA	127346675	127358485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346730_127346848_127346980_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.20	chr3	+	5956	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-22	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.5316448694334	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCTTTAAGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	127347115	127410600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127367422_127367505_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.21	chr3	+	3598	6	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-19	-326	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	27.0880047253392	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTCGCATATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127347118	127358161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123
ES.22562.22	chr3	+	6459	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-19	-44	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	22.5920339943087	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCGAAAATGTGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	127347118	127410590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.23	chr3	+	3927	9	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-19	17453	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	25.2623732060153	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAGAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	127347118	127375940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094
ES.22562.24	chr3	+	4358	5	ISM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-162	1	-18	-1	intron_retention	FALSE	canonical	3	63	junction_3	5.7227615711298	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTATGTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	127347119	127358486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
ES.22562.25	chr3	+	4825	8	ISM	ENSMUSG00000051278.13	ENSMUST00000200490.5	7153	25	-15	42469	-15	10709	5prime_fragment	FALSE	canonical	3	20	junction_6	22.494443758404	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGCAAACTTAGATATC	NA	False	NA	NA	False	NA	NA	NA	127347122	127369196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788
ES.22562.26	chr3	+	6640	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	-15	421	-15	-416	multi-exon	FALSE	canonical	1	17	junction_9	21.9453867589523	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTCTTAATCCTAATT	NA	False	NA	NA	False	AATAAA	-31	NA	127347122	127411249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.27	chr3	+	3538	6	ISM	ENSMUSG00000051278.13	ENSMUST00000199888.5	7198	24	-25	52614	-12	-319	5prime_fragment	FALSE	canonical	0	0	junction_1	28.4576878892155	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATATGTGTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	127347125	127358168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347202_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.28	chr3	+	7253	24	NNC	ENSMUSG00000051278.13	novel	7153	25	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	25.8342835770514	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	127347125	127411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127377232_127377820_127378304_127378444_127379669_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.3	chr3	+	3868	7	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-459	-317	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.6249673969545	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	127346678	127358170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346980_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.30	chr3	+	7433	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.5919011058519	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAATTCTTATGTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	127347127	127411663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379757_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.31	chr3	+	5980	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-10	-68	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	23.1345283072727	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATAATGTACTGAATA	NA	False	NA	NA	False	NA	NA	NA	127347127	127410566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375247_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.32	chr3	+	6398	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-9	-52	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	24.2421121192028	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTGCATGCGAAAATG	NA	False	NA	NA	False	NA	NA	NA	127347128	127410582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.33	chr3	+	892	5	ISM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-153	3458	-9	-3458	5prime_fragment	FALSE	canonical	3	63	junction_3	5.7227615711298	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAAATACCAAAT	NA	False	NA	NA	False	NA	NA	NA	127347128	127355029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544
ES.22562.34	chr3	+	6179	24	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-9	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.4141499368606	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTGCATGCGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	127347128	127410583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127377232_127377820_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.35	chr3	+	5970	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	-9	1085	-9	-49	multi-exon	FALSE	canonical	1	17	junction_9	21.9453867589523	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCATGCGAAAATGTGC	NA	False	NA	NA	False	NA	NA	NA	127347128	127410585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.36	chr3	+	6925	25	NIC	ENSMUSG00000051278.13	novel	7153	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_8	22.0969690606351	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	127347129	127411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.37	chr3	+	6850	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-8	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.8134157261752	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGCATGCGAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	127347129	127410584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127376141_127377229_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.38	chr3	+	6100	25	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-7	121	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	23.1480740739556	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGTGGACACAGCACT	NA	False	NA	NA	False	AATAAA	-24	NA	127347130	127410903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.39	chr3	+	6691	25	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-6	131	intron_retention	TRUE	non_canonical	0	0	junction_6	25.2707216952742	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCACTGTCCTTTGCA	NA	False	NA	NA	False	AATAAA	-34	NA	127347131	127410913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127356868_127361276_127361355_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407115_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.4	chr3	+	4085	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-598	317	-454	-317	multi-exon	FALSE	canonical	3	40	junction_5	13.6	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	127346683	127358170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ES.22562.40	chr3	+	7332	25	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	25.0726721529415	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAATTCTTATGTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	127347131	127411663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407115_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.41	chr3	+	3916	5	NIC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	-3	151	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.1112520496907	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGCTAAAAGTATGAG	NA	False	NA	NA	False	ATTAAA	-20	NA	127347134	127358638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127355123
ES.22562.42	chr3	+	5950	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-2	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.0939355223528	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATAATGTACTGAATA	NA	False	NA	NA	False	NA	NA	NA	127347135	127410566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354221_127354352_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.43	chr3	+	3405	9	ISM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	3	35756	3	17427	5prime_fragment	FALSE	canonical	3	20	junction_6	23.5531314266278	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127347140	127375914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094
ES.22562.44	chr3	+	5645	24	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	5	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.4332093353341	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAGTGCATGCGAAAA	NA	False	NA	NA	False	NA	NA	NA	127347142	127410580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123_127356868_127361276_127361351_127366788_127366975_127377232_127377820_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.45	chr3	+	7456	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	24.2858312602225	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	127347142	127411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383704_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.46	chr3	+	6850	25	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	23.1480740739556	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	127347142	127411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.47	chr3	+	5937	25	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	5	-30	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	23.1480740739556	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACATAAA	NA	False	NA	NA	False	CATAAA	-17	NA	127347142	127410752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.48	chr3	+	3896	6	NNC	ENSMUSG00000051278.13	novel	3804	6	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	27.0880047253392	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGTTTATGTATGTG	NA	False	NA	NA	False	NA	NA	NA	127347143	127358484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354688_127355123
ES.22562.49	chr3	+	5783	25	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-6	-34	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	23.1480740739556	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCTTTAAGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	127347144	127410600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.5	chr3	+	3292	6	NNC	ENSMUSG00000051278.13	novel	7153	25	NA	NA	-442	17453	intron_retention	FALSE	non_canonical	0	0	junction_5	33.9741077881377	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAGAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	127346695	127375940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346856_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127357319_127375813
ES.22562.50	chr3	+	5745	4	ISM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	-133	-150	-2	150	intron_retention	FALSE	canonical	3	63	junction_3	4.32049379893857	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTGCTAAAAGTATGA	NA	False	NA	NA	False	ATTAAA	-19	NA	127347148	127358637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219
ES.22562.51	chr3	+	5882	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	9	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	23.7037043518518	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTGCATGCGAAAATG	NA	False	NA	NA	False	NA	NA	NA	127347159	127410582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383704_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.52	chr3	+	7022	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	26	-2	13	0	multi-exon	FALSE	canonical	1	17	junction_9	21.9453867589523	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTATGTGGAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	127347163	127411672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.53	chr3	+	3191	4	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	7414	17366	intron_retention	FALSE	canonical	3	20	junction_1	2.16024689946929	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTAATGTAAATCAGTA	NA	False	NA	NA	False	NA	NA	NA	127354695	127375853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_127356868_127361276_127361351_127366788_127366975_127375094
ES.22562.54	chr3	+	6140	20	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	8511	2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	23.3762433565063	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTCTTATGTGGAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	127355792	127411667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127357342_127361276_127361351_127366788_127366975_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.55	chr3	+	3520	12	ISM	ENSMUSG00000051278.13	ENSMUST00000199888.5	7198	24	40823	232	95	-84	3prime_fragment	FALSE	canonical	1	18	junction_8	18.6755685189001	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGTTTCATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	127387973	127410550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.56	chr3	+	5093	10	NNC	ENSMUSG00000051278.13	novel	6932	26	NA	NA	4483	0	intron_retention	FALSE	canonical	0	0	junction_6	23.5597480545752	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAATTCTTATGTGGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	127392361	127411665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407120_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.6	chr3	+	7094	26	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-442	20	at_least_one_novel_splicesite	TRUE	canonical	1	10	junction_6	22.5920339943087	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACAGTGGATTCTTCTG	NA	False	NA	NA	False	CATAAA	-31	NA	127346695	127410802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127357342_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.7	chr3	+	5964	26	NNC	ENSMUSG00000051278.13	novel	2994	16	NA	NA	-441	-38	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	23.2501526876707	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCTCTTTAAGGTG	NA	False	NA	NA	False	NA	NA	NA	127346696	127410596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346856_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.8	chr3	+	6177	27	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-439	-50	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.5073952860817	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGCATGCGAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	127346698	127410584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346980_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ES.22562.9	chr3	+	5899	25	NNC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	-431	-1153	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.6654411433403	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTATGCTTTGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	127346706	127409481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_127346980_127347201_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085
ES.22563.1	chr3	-	3238	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	3	-1120	1	1120	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTGTTAGAAAGTG	NA	False	NA	NA	False	TATAAA	-17	NA	127346995	127329242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.10	chr3	-	2189	14	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	309.516534626344	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346943	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346323_127346449_127346831
ES.22563.11	chr3	-	5773	10	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	466	junction_4	154.47529667863	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346895	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
ES.22563.14	chr3	-	2201	12	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	466	junction_6	119.095697336079	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127347008	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.15	chr3	-	4531	9	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	466	junction_4	174.152187396541	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127347006	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127330684_127334193_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340468_127340569_127340840_127341010_127341196_127346831
ES.22563.18	chr3	-	2155	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	256.000922307366	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127347005	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340683_127340738_127340840_127341010_127341196_127346831
ES.22563.19	chr3	-	2174	12	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	28	-2	intron_retention	FALSE	canonical	3	466	junction_6	151.248632259371	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346968	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
ES.22563.2	chr3	-	2134	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	256.834198570898	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346969	127330362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346789
ES.22563.21	chr3	-	3721	10	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	466	junction_5	130.455706498507	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346896	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127339620_127339695_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
ES.22563.24	chr3	-	2038	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	54	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	319.022497900488	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTTTGGTTTTATTT	NA	False	NA	-4	True	AATAAA	-14	NA	127346942	127330365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340050_127340131_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341024_127341196_127346831
ES.22563.25	chr3	-	5572	12	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	51	-3	intron_retention	FALSE	canonical	3	68	junction_3	244.185270401373	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTTTGGTTTTATTT	NA	False	NA	-4	True	AATAAA	-14	NA	127346945	127330365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127334286_127334447_127334608_127336680_127336803_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.27	chr3	-	4357	10	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	69	-4	intron_retention	FALSE	canonical	3	471	junction_4	128.264868702267	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTTTTGGTTTTATT	NA	False	NA	-5	True	AATAAA	-13	NA	127346927	127330366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127330684_127334193_127336806_127337802_127337928_127339474_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.29	chr3	-	1986	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	166	-8	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	254.560732766597	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAATTGTTTTGGTTT	NA	False	NA	-9	True	AATAAA	-9	NA	127346680	127330370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346640
ES.22563.3	chr3	-	2126	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	-7	2	-7	-2	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127347005	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.30	chr3	-	1929	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	88	104	-64	-104	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAAGTGCATGTTTGT	NA	False	NA	-105	True	AAGAAA	-44	NA	127346910	127330466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.31	chr3	-	3837	6	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	1	722	intron_retention	FALSE	canonical	3	471	junction_1	156.866057514046	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127346995	127337093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127340053_127340124_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
ES.22563.32	chr3	-	679	6	ISM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	108	9771	-44	-14	5prime_fragment	FALSE	canonical	3	772	junction_1	64.3011663968858	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCAGGTGAGTGCTTA	NA	False	NA	NA	False	AAAACA	-19	NA	127346890	127340133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22563.4	chr3	-	2108	14	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	175	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	309.516534626344	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346671	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346323_127346449_127346640
ES.22563.6	chr3	-	5893	9	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	466	junction_5	150.111416954208	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346991	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340840_127341010_127341196_127346831
ES.22563.8	chr3	-	2061	13	NNC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	248.488136873104	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGGTTTTATTTA	NA	False	NA	-3	True	AATAAA	-15	NA	127346947	127330364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340131_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ES.22564.1	chr3	-	238	1	Intergenic	novelGene_18566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	127352621	127352383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127352400_127352600
ES.22565.1	chr3	-	7970	1	Antisense	novelGene_ENSMUSG00000051278.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	127384213	127376243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_127376200_127384200
ES.22565.2	chr3	-	2627	5	Antisense	novelGene_ENSMUSG00000051278.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	127384215	127376243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_127377814_127378295_127378371_127379665_127379851_127381587_127381785_127383615
ES.22565.3	chr3	-	2669	5	Antisense	novelGene_ENSMUSG00000051278.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	127384215	127376272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_127377814_127378295_127378441_127379664_127379851_127381587_127381785_127383615
ES.22565.4	chr3	-	6096	2	Antisense	novelGene_ENSMUSG00000051278.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	127384217	127376273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_127377818_127379665
ES.22566.3	chr3	-	2351	7	Antisense	novelGene_ENSMUSG00000051278.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGTGGCTA	1938	False	NA	NA	False	NA	NA	NA	127407116	127391016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_127392464_127394625_127394891_127396046_127396206_127400016_127400094_127402131_127402280_127405430_127405559_127406989
ES.22567.1	chr3	-	176	1	Intergenic	novelGene_18567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	127442234	127442058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127442100_127442200
ES.22568.1	chr3	+	1645	1	Antisense	novelGene_ENSMUSG00000074238.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAATCAATCAAGA	NA	False	NA	NA	False	NA	NA	NA	127610670	127612315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_127610700_127612300
ES.22569.1	chr3	-	2681	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	4	-23	4	18	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCCAGGTGGTATGAG	NA	False	NA	7	True	AATAAA	-39	NA	127631156	127600637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.11	chr3	-	2778	11	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	180.369731385285	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631100	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610065_127610244_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.12	chr3	-	2638	9	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	147.732814144319	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631145	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610659_127616216_127616260_127616913_127616963_127630797
ES.22569.13	chr3	-	6398	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	15	-2	intron_retention	FALSE	canonical	3	416	junction_7	23.0891614182932	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631145	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.15	chr3	-	9894	7	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	34	-2	intron_retention	FALSE	canonical	3	416	junction_5	23.8496447679112	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631126	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.17	chr3	-	2630	10	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	140.073613803423	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631124	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606882_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.18	chr3	-	2611	10	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	139.321991386682	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631145	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610622_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.2	chr3	-	2544	9	FSM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	36	0	24	0	multi-exon	FALSE	canonical	3	8	junction_4	148.476376487979	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATCATGGCTTCATAA	NA	False	NA	-11	True	AATAAA	-21	NA	127631136	127600655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.20	chr3	-	2476	8	NIC	ENSMUSG00000074238.7	novel	2580	9	NA	NA	59	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	191.98054748397	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631101	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127616232_127616260_127616913_127616963_127630797
ES.22569.21	chr3	-	2592	8	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	157.486377771773	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631095	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610665_127616872_127616963_127630797
ES.22569.22	chr3	-	2639	10	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	142.284621727884	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127631126	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616976_127630797
ES.22569.24	chr3	-	6823	5	ISM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	17092	2	2214	-2	intron_retention	FALSE	canonical	3	421	junction_4	22.2190796389049	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATATTTGCATCATGGC	NA	False	NA	-18	True	AATAAA	-14	NA	127614068	127600662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244
ES.22569.26	chr3	-	2936	11	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	15	-3	intron_retention	FALSE	canonical	0	0	junction_5	206.532539809106	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATTTGCATCATGG	NA	False	NA	-19	True	AATAAA	-13	NA	127631145	127600663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610065_127610244_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630683
ES.22569.27	chr3	-	2647	11	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	43	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	179.530192446842	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATTTGCATCATGG	NA	False	NA	-19	True	AATAAA	-13	NA	127631117	127600663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127628512_127628544_127630797
ES.22569.28	chr3	-	2430	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	-16	248	-4	7	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGGTTATGCTATTATT	NA	False	NA	-1	True	AATAAA	-23	NA	127631176	127600908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.29	chr3	-	2344	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	36	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGCATTAGGTTATG	NA	False	NA	-9	True	AATAAA	-15	NA	127631124	127600916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
ES.22569.3	chr3	-	2641	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCATCATGGCTTCATA	NA	False	NA	-12	True	AATAAA	-20	NA	127631161	127600656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
ES.22569.30	chr3	-	2245	8	NIC	ENSMUSG00000074238.7	novel	2580	9	NA	NA	36	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	191.98054748397	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGCATTAGGTTATG	NA	False	NA	-9	True	AATAAA	-15	NA	127631124	127600916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127616232_127616260_127616913_127616963_127630797
ES.22569.4	chr3	-	4940	10	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_9	142.284621727884	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATCATGGCTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	127631150	127600657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127628512
ES.22569.5	chr3	-	3721	5	NNC	ENSMUSG00000074238.7	novel	218	5	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.636019070334	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATCATGGCTTCAT	NA	False	NA	-13	True	AATAAA	-19	NA	127631092	127600657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127601657_127612083_127614435_127616232_127616260_127616913_127616963_127630797
ES.22569.6	chr3	-	2629	9	NNC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	147.732814144319	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCATCATGGCTTCA	NA	False	NA	-14	True	AATAAA	-18	NA	127631132	127600658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610671_127616228_127616260_127616913_127616963_127630797
ES.22569.9	chr3	-	3820	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	57	0	intron_retention	FALSE	canonical	3	416	junction_7	26.5471279049166	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	-16	True	AATAAA	-16	NA	127631103	127600660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ES.2257.1	chr10	-	177	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	4178380	4178203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4178200_4178400
ES.22570.1	chr3	-	1607	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	-9	636	-9	-14	multi-exon	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAATGACTTTGA	2565	False	NA	NA	False	AATACA	-6	NA	127689982	127663342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127664650_127689682
ES.22570.2	chr3	-	1608	3	FSM	ENSMUSG00000050549.9	ENSMUST00000057198.9	1607	3	-15	14	-15	-14	multi-exon	FALSE	canonical	0	0	junction_1	1	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAAATGACTTTGA	2595	False	NA	NA	False	AATACA	-6	NA	127689952	127663342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127664650_127681603_127681635_127689682
ES.22570.3	chr3	-	1490	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	-9	753	-9	-131	multi-exon	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCAGTAGCCACTTGT	2565	False	NA	NA	False	AATAAA	-18	NA	127689982	127663459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127664650_127689682
ES.22570.4	chr3	-	858	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	29	1347	-7	-725	multi-exon	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAAGAGACCTGTAG	2603	False	NA	NA	False	AATAAA	-10	NA	127689944	127664053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127664650_127689682
ES.22570.5	chr3	-	713	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	40	1481	4	-859	multi-exon	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACCTACTGTTAGAT	2614	False	NA	NA	False	ATTAAA	-20	NA	127689933	127664187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_127664650_127689682
ES.22571.1	chr3	-	177	1	Intergenic	novelGene_18568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	NA	False	NA	NA	False	NA	NA	NA	127722722	127722545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127722500_127722700
ES.22572.1	chr3	-	158	1	Intergenic	novelGene_18569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	127804237	127804079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_127804100_127804200
ES.22573.1	chr3	+	2275	3	FSM	ENSMUSG00000028023.17	ENSMUST00000042587.12	2271	3	-4	0	-4	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTCTGGATTCTTTC	NA	False	NA	NA	False	AGTAAA	-14	NA	129007616	129013237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129008431_129009287_129009494_129011982
ES.22573.2	chr3	+	1391	2	NNC	ENSMUSG00000028023.17	novel	1942	5	NA	NA	3318	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGGTCTGGATTCTT	NA	False	NA	NA	False	AGTAAA	-12	NA	129011241	129013235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129011380_129011982
ES.22574.1	chr3	+	159	1	Intergenic	novelGene_18570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129039983	129040142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129040000_129040100
ES.22575.1	chr3	-	4557	7	Antisense	novelGene_ENSMUSG00000106258.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.763762615825973	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAATCTTAGTTATTGT	NA	False	NA	NA	False	NA	NA	NA	129268275	129223685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_129224046_129224099_129227960_129231008_129231075_129234999_129235083_129267030_129267086_129267805_129267894_129268230
ES.22575.2	chr3	-	2335	1	Intergenic	novelGene_18571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGCATTGTGGG	NA	False	NA	NA	False	AATAAA	-34	NA	129227259	129224924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129224900_129227300
ES.22576.1	chr3	+	175	1	Intergenic	novelGene_18572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCAAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	129280447	129280622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129280400_129280600
ES.22577.1	chr3	-	235	1	Intergenic	novelGene_18573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATAAGTCTGTCCTC	NA	False	NA	NA	False	NA	NA	NA	129296120	129295885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129295900_129296100
ES.22578.1	chr3	-	705	3	FSM	ENSMUSG00000105837.5	ENSMUST00000197370.5	655	3	-44	-6	-44	6	multi-exon	FALSE	canonical	2	5	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATTTTTTTCTTGAAA	6917	False	NA	NA	False	AATAAA	-14	NA	129325802	129321109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129321464_129324707_129324814_129325557
ES.22579.1	chr3	+	6038	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	-86	-1	-55	1	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTTCTTTGTTGT	NA	False	NA	18	True	AATAAA	-26	NA	129325948	129432145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.10	chr3	+	2760	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	32	-182	1	182	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATAATAGTATTCTAAT	NA	False	NA	40	True	CATAAA	-12	NA	129326035	129428802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.11	chr3	+	720	2	ISM	ENSMUSG00000041220.11	ENSMUST00000197235.5	797	5	-340	84272	1	-79154	5prime_fragment	FALSE	canonical	1	2	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTACCACCAAAATAGT	NA	False	NA	NA	False	AATACA	-43	NA	129326035	129342814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129326418_129342476
ES.22579.12	chr3	+	2828	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	7	3116	7	408	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATATTATTTTAGCT	NA	False	NA	NA	False	AGTAAA	-20	NA	129326041	129429028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.13	chr3	+	2992	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	7	2952	7	572	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGACCCATGTAGATC	NA	False	NA	24	True	AATAAA	-38	NA	129326041	129429192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.14	chr3	+	5021	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	16	914	16	-914	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCTGAATGAAGCTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	129326050	129431230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.16	chr3	+	5526	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.96359178214	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGTTTCTAGTTCTT	NA	False	NA	12	True	AATAAA	-20	NA	129326053	129432139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326277_129326418_129398689_129398822_129421931_129422084_129426708_129430504_129430923
ES.22579.17	chr3	+	5858	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	19	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	151.945516551164	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTCTAGTTCTTTGTT	NA	False	NA	16	True	AATAAA	-24	NA	129326053	129432143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129421933_129422084_129426708_129428612_129428682
ES.22579.18	chr3	+	2299	4	FSM	ENSMUSG00000041220.11	ENSMUST00000197070.5	2275	4	38	-62	19	43	multi-exon	FALSE	canonical	1	15	junction_3	88.9094420682578	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	-99	True	NA	NA	NA	129326053	129428663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129426708
ES.22579.19	chr3	+	7536	4	NNC	ENSMUSG00000041220.11	novel	2275	4	NA	NA	30	-15698	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	94.383378951075	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATAAAATTACATAAAATT	NA	False	NA	NA	False	NA	NA	NA	129326064	129406270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129400613_129400858
ES.22579.2	chr3	+	2692	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	-86	3345	-55	179	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATATAATAGTATTCT	NA	False	NA	37	True	CATAAA	-9	NA	129325948	129428799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.20	chr3	+	5859	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	34	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.505451620809	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTCTAGTTCTTTG	NA	False	NA	14	True	AATAAA	-22	NA	129326068	129432141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708_129429831_129429885
ES.22579.21	chr3	+	3269	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	35	2647	35	877	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCTATCAGTTGAATTG	NA	False	NA	NA	False	AAGAAA	-27	NA	129326069	129429497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.22	chr3	+	6068	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	66	-3524	35	0	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326069	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.24	chr3	+	3827	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.505451620809	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326069	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708_129428492_129430580
ES.22579.26	chr3	+	5135	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	83	-2608	52	-916	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCGCTGAATGAAGCTCT	NA	False	NA	NA	False	AATAAA	-24	NA	129326086	129431228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.27	chr3	+	5840	5	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	150.074981259369	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326089	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129421987_129422084_129426708
ES.22579.28	chr3	+	1576	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	59	4316	59	742	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGGGCTTGTATGTT	NA	False	NA	NA	False	AGTAAA	-27	NA	129326093	129427828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.29	chr3	+	5985	6	NIC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	182.100411861149	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326093	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_129326145_129326296_129326418_129342476_129342570_129398689_129398822_129421931_129422084_129426708
ES.22579.3	chr3	+	5811	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.505451620809	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTCTAGTTCTTT	NA	False	NA	13	True	AATAAA	-21	NA	129326004	129432140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708_129428207_129428372
ES.22579.31	chr3	+	2570	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	113	-73	82	73	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAAGCTAGACAATGTT	NA	False	NA	-69	True	NA	NA	NA	129326116	129428693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.32	chr3	+	3066	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	114	-570	83	570	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAGGACCCATGTAGA	NA	False	NA	22	True	AATAAA	-36	NA	129326117	129429190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.33	chr3	+	1228	4	NNC	ENSMUSG00000041220.11	novel	2275	4	NA	NA	85	-10327	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	93.2714080281603	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTCTGCTTTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	129326119	129411641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129410691
ES.22579.34	chr3	+	6145	4	NNC	ENSMUSG00000041220.11	novel	2610	4	NA	NA	89	-15698	intron_retention	FALSE	non_canonical	0	0	junction_1	0	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATAAAATTACATAAAATT	NA	False	NA	NA	False	NA	NA	NA	129326123	129406270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326418_129398693_129400613_129400858_129402635_129404114
ES.22579.36	chr3	+	6248	5	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	102	0	intron_retention	FALSE	canonical	0	0	junction_2	167.033492150527	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326136	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326418_129398689_129398822_129412370_129412674_129421987_129422084_129426708
ES.22579.37	chr3	+	2368	4	NNC	ENSMUSG00000041220.11	novel	2610	4	NA	NA	738	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.149375870957	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGCAAGCTAG	NA	False	NA	-77	True	NA	NA	NA	129327113	129428685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129327221_129398689_129398822_129421931_129422084_129426708
ES.22579.38	chr3	+	5514	1	FSM	ENSMUSG00000106092.2	ENSMUST00000200283.2	1671	1	1575	-5418	1575	5418	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTGTAAAGAAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	129333364	129338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129333400_129338900
ES.22579.39	chr3	+	2366	4	NNC	ENSMUSG00000041220.11	novel	2610	4	NA	NA	-4435	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.149375870957	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	-99	True	NA	NA	NA	129341593	129428663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129341721_129398689_129398822_129421931_129422084_129426708
ES.22579.4	chr3	+	2765	6	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	3	-580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.945516551164	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGGAAGAAGCTCAG	NA	False	NA	NA	False	AGTAAA	-8	NA	129326006	129428021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326145_129326296_129326418_129398689_129398822_129420802_129422084_129426708_129426794_129427013
ES.22579.40	chr3	+	6121	4	NIC	ENSMUSG00000041220.11	novel	373	3	NA	NA	-197	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	187.149375870957	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129345831	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_129346233_129398689_129398822_129421931_129422084_129426708
ES.22579.41	chr3	+	2575	4	NIC	ENSMUSG00000041220.11	novel	373	3	NA	NA	-193	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	187.149375870957	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	129345835	129428602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_129346233_129398689_129398822_129421931_129422084_129426708
ES.22579.42	chr3	+	2345	1	Intergenic	novelGene_18574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAACTGGAAAGACATTAA	NA	False	NA	NA	False	NA	NA	NA	129353635	129355980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129353600_129356000
ES.22579.43	chr3	+	3090	4	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	52105	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	186.676190233249	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129398133	129428655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129398822_129412370_129412674_129421931_129422084_129426708
ES.22579.44	chr3	+	4193	4	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	52711	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.973116336744	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGCAAGCTAG	NA	False	NA	-77	True	NA	NA	NA	129398739	129428685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129398822_129410691_129412674_129421931_129422084_129426708
ES.22579.45	chr3	+	2294	1	Intergenic	novelGene_18579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGCCTCAGTGATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	129413442	129415736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129413400_129415700
ES.22579.46	chr3	+	175	1	Intergenic	novelGene_18580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	129417501	129417676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129417500_129417700
ES.22579.47	chr3	+	4541	2	ISM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	93617	-166	73592	166	3prime_fragment	FALSE	canonical	3	396	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTTGTTCAATGTGAT	NA	False	NA	24	True	AATAAA	-38	NA	129419620	129428786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129422084_129426708
ES.22579.48	chr3	+	2797	2	ISM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	95206	-11	75181	11	3prime_fragment	FALSE	canonical	3	396	junction_1	0	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129421209	129428631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129422084_129426708
ES.22579.49	chr3	+	5831	2	ISM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	95649	5	75655	-5	3prime_fragment	FALSE	canonical	3	396	junction_1	0	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGTTTCTAGTTCTT	NA	False	NA	12	True	AATAAA	-20	NA	129421683	129432139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129422084_129426708
ES.22579.5	chr3	+	2519	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	-27	3459	4	65	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGCAAGCTAG	NA	False	NA	-77	True	NA	NA	NA	129326007	129428685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.50	chr3	+	4738	1	NIC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	77893	39	mono-exon	FALSE	NA	NA	NA	NA	NA	553	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129423921	129428659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_129423900_129428700
ES.22579.51	chr3	+	3592	2	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	82034	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129428062	129432144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129428551_129429040
ES.22579.52	chr3	+	4710	1	Genic_Genomic	ENSMUSG00000041220.11	novel	NA	NA	NA	NA	85799	4393	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTTAAGCAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	129431827	129436537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_129431800_129436500
ES.22579.7	chr3	+	5898	5	NNC	ENSMUSG00000041220.11	novel	5951	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.810280695047	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTCTAGTTCTTTG	NA	False	NA	14	True	AATAAA	-22	NA	129326007	129432141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129326068_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.22579.8	chr3	+	5807	4	FSM	ENSMUSG00000041220.11	ENSMUST00000197070.5	2275	4	7	-3539	7	-4	multi-exon	FALSE	canonical	1	15	junction_3	88.9094420682578	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTCTAGTTCTTT	NA	False	NA	13	True	AATAAA	-21	NA	129326022	129432140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129426708
ES.22579.9	chr3	+	2045	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	1	3905	1	-362	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCTATATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	129326035	129428239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ES.2258.1	chr10	+	6587	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23953	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	642.148456355693	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4192426	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.10	chr10	+	6410	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12511	2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	627.571382394067	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTTTATTAAAT	NA	False	NA	25	True	AATAAA	-21	NA	4203868	4309472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.11	chr10	+	6362	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12498	1	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_1	614.096083687235	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4203881	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4216370_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.12	chr10	+	6342	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12498	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	623.094021797674	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4203881	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.13	chr10	+	6609	8	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12498	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	642.551991067252	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTATATTCACTGTTTT	NA	False	NA	15	True	AATAAA	-11	NA	4203881	4309462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4209171_4209346_4211112_4211212_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.15	chr10	+	6372	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12498	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	647.317356479803	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4203881	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203948_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.16	chr10	+	6437	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12492	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	649.997863244351	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4203887	4309470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4211112_4211212_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.17	chr10	+	6487	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12492	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	649.997863244351	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4203887	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4211112_4211212_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.18	chr10	+	6240	8	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12479	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	642.675625166906	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATATTCACTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	4203900	4309464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4209171_4209346_4216367_4216669_4263742_4263858_4303141_4303585_4303857_4307940_4308477
ES.2258.19	chr10	+	6482	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12467	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	650.32983084654	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4203912	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4213860_4214035_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.2	chr10	+	6637	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23909	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	659.549593788569	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4192470	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4207397_4207470_4211112_4211212_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.20	chr10	+	6557	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12449	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	657.265991310469	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4203930	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4204846_4205059_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.21	chr10	+	6570	8	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12449	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	643.166496995251	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4203930	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4211112_4211212_4215319_4215449_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.22	chr10	+	6407	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12449	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	649.997863244351	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4203930	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4211112_4211212_4216370_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.23	chr10	+	6651	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12446	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	649.997863244351	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTATATTCACTGTTTT	NA	False	NA	15	True	AATAAA	-11	NA	4203933	4309462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4215319_4215687_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.24	chr10	+	4889	9	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12435	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	456.844595431532	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTGTTTTTTTAT	NA	False	NA	20	True	AATAAA	-16	NA	4203944	4309467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4209171_4209346_4211112_4211212_4213860_4214035_4216390_4216669_4263742_4263858_4303141_4306855_4309225
ES.2258.25	chr10	+	6517	8	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-12435	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	632.712947132732	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4203944	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4203967_4207397_4207470_4213860_4214035_4216390_4216669_4263742_4263858_4265974_4266041_4303141_4307940_4308477
ES.2258.26	chr10	+	6310	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-11795	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	643.798291392576	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4204584	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4204641_4207397_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.27	chr10	+	6257	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-8984	-1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	575.896909177328	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4207395	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.28	chr10	+	6309	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-8984	-3	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	583.367540663688	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTGTTTTTTTAT	NA	False	NA	20	True	AATAAA	-16	NA	4207395	4309467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.29	chr10	+	6321	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-823	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	599.951820982319	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4215556	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4215698_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.3	chr10	+	6763	8	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23909	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	649.559159769775	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4192470	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4207397_4207470_4209171_4209346_4211112_4211212_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.30	chr10	+	6402	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-592	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	599.951820982319	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4215787	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216005_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.31	chr10	+	6444	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-582	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	597.972616429883	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4215797	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216005_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.32	chr10	+	6501	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-305	-1	-305	1	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4216074	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.34	chr10	+	7160	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-51	-914	-51	914	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGGTGTCTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	4216328	4310384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.35	chr10	+	4089	3	ISM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-36	2680	-36	-2680	5prime_fragment	FALSE	canonical	3	1052	junction_2	17	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACAGAGACCAAGACAG	NA	False	NA	56	True	NA	NA	NA	4216343	4306790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4216669_4263742_4263858_4303141
ES.2258.36	chr10	+	6100	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	686.827974580729	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4216348	4309470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216543_4263742_4263858_4303141_4307940_4308477
ES.2258.37	chr10	+	4713	3	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	831.5	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4216353	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216472_4304336_4307940_4308477
ES.2258.38	chr10	+	6095	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.951820982319	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTGTTTTTTTAT	NA	False	NA	20	True	AATAAA	-16	NA	4216362	4309467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4306481_4306594_4307940_4308477
ES.2258.39	chr10	+	6142	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.951820982319	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4216362	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4303768_4303836_4307940_4308477
ES.2258.4	chr10	+	6481	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23901	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	637.849700164545	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4192478	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4207397_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.40	chr10	+	6220	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	689.435679056107	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4216362	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303131_4307940_4308477
ES.2258.41	chr10	+	6749	3	ISM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	-17	1	-17	-1	intron_retention	FALSE	canonical	3	1052	junction_2	17	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4216362	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4216669_4263742_4263858_4303141
ES.2258.42	chr10	+	6166	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.951820982319	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	NA	False	NA	19	True	AATAAA	-15	NA	4216362	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4304105_4304146_4307940_4308477
ES.2258.43	chr10	+	1615	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	504.122560054155	1553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4216362	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4303345_4308477
ES.2258.44	chr10	+	3765	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.951820982319	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4216362	4309470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4303443_4305889_4307940_4308477
ES.2258.45	chr10	+	6034	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	599.951820982319	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4216362	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303141_4306710_4306888_4307940_4308477
ES.2258.46	chr10	+	6128	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	686.827974580729	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4216362	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216576_4263734_4263858_4303141_4307940_4308477
ES.2258.47	chr10	+	6168	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	689.435679056107	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4216423	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4216669_4263742_4263858_4303123_4307940_4308477
ES.2258.48	chr10	+	6079	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	1355	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	683.315609526244	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4217734	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4217907_4263742_4263858_4303141_4307940_4308477
ES.2258.49	chr10	+	164	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	766	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTATAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	4234474	4234638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4234500_4234600
ES.2258.5	chr10	+	6619	7	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23898	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	652.354453754501	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4192481	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4194783_4194922_4207397_4207470_4216387_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.50	chr10	+	5952	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	24028	-1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	681.999185401925	1545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTGTTTTTTTATTA	NA	False	NA	22	True	AATAAA	-18	NA	4240407	4309469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4240455_4263742_4263858_4303141_4307940_4308477
ES.2258.51	chr10	+	6003	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	29615	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	686.827974580729	1545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	2085	False	NA	19	True	AATAAA	-15	NA	4245994	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4246096_4263742_4263858_4303141_4307940_4308477
ES.2258.52	chr10	+	6040	4	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	30614	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	685.949625620489	1545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCACTGTTTTTTTA	3084	False	NA	19	True	AATAAA	-15	NA	4246993	4309466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4247132_4263742_4263858_4303141_4307940_4308477
ES.2258.53	chr10	+	3317	2	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	770	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGACTGTGGTTTCTC	1388	False	NA	NA	False	NA	NA	NA	4255327	4258856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4255376_4255587
ES.2258.54	chr10	+	3988	1	Genic_Genomic	ENSMUSG00000038587.11	novel	NA	NA	NA	NA	-3240	-18360	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTGAAAATAATTATTT	NA	False	NA	NA	False	NA	NA	NA	4281304	4285292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_4281300_4285300
ES.2258.55	chr10	+	3405	1	Genic_Genomic	ENSMUSG00000038587.11	novel	NA	NA	NA	NA	-1179	-16882	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAACTAGGGAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	4283365	4286770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_4283400_4286800
ES.2258.56	chr10	+	6011	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	-54	-1	-54	1	multi-exon	FALSE	canonical	3	114	junction_1	774.5	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4284490	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4284710_4303141_4307940_4308477
ES.2258.57	chr10	+	157	1	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	4295441	4295598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_4295400_4295600
ES.2258.58	chr10	+	5742	3	NNC	ENSMUSG00000038587.11	novel	5956	3	NA	NA	5379	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	831.5	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4303146	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4303238_4303279_4307940_4308477
ES.2258.59	chr10	+	4074	3	NNC	ENSMUSG00000038587.11	novel	5956	3	NA	NA	6584	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	831.5	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4304351	4309470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4307043_4307549_4307940_4308477
ES.2258.6	chr10	+	6460	5	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-23898	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	597.972616429883	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTTTTTTTATTAAA	NA	False	NA	24	True	AATAAA	-20	NA	4192481	4309471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4192703_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.60	chr10	+	3350	3	NNC	ENSMUSG00000038587.11	novel	5956	3	NA	NA	7034	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	831.5	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTGTTTTTTTAT	NA	False	NA	20	True	AATAAA	-16	NA	4304801	4309467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4307940_4308477_4308552_4309329
ES.2258.61	chr10	+	4080	3	NNC	ENSMUSG00000038587.11	novel	5956	3	NA	NA	7035	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	831.5	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4304802	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4306087_4306134_4307940_4308477
ES.2258.8	chr10	+	6395	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-21558	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	643.798291392576	1557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	False	NA	21	True	AATAAA	-17	NA	4194821	4309468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4194963_4207397_4207470_4216390_4216669_4263742_4263858_4303141_4307940_4308477
ES.2258.9	chr10	+	6369	6	NNC	ENSMUSG00000038587.11	novel	6195	4	NA	NA	-16709	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	648.028270988234	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTGTTTTTTTAT	NA	False	NA	20	True	AATAAA	-16	NA	4199670	4309467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4199733_4207397_4207470_4216336_4216669_4263742_4263858_4303141_4307940_4308477
ES.22580.1	chr3	-	183	1	Intergenic	novelGene_18575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	129358447	129358264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129358300_129358400
ES.22581.1	chr3	-	1761	3	Antisense	novelGene_ENSMUSG00000041220.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGACATTGTTTAAA	NA	False	NA	NA	False	AGTAAA	-20	NA	129370328	129365991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_129367601_129369273_129369318_129370220
ES.22581.2	chr3	-	1521	3	Antisense	novelGene_ENSMUSG00000041220.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATTCGTTTGTGTATC	NA	False	NA	NA	False	AATACA	-19	NA	129370312	129366215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_129367601_129369273_129369318_129370220
ES.22582.1	chr3	-	179	1	Intergenic	novelGene_18576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTATCT	NA	False	NA	NA	False	NA	NA	NA	129370832	129370653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129370700_129370800
ES.22583.1	chr3	-	4854	1	Intergenic	novelGene_18577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACCATTAGTTTGGGT	NA	False	NA	NA	False	TATAAA	-44	NA	129405168	129400314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129400300_129405200
ES.22584.1	chr3	-	2540	1	Intergenic	novelGene_18578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTAGTTTTGCTTTCCCCC	NA	False	NA	NA	False	NA	NA	NA	129415286	129412746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129412700_129415300
ES.22585.1	chr3	-	4072	2	Antisense	novelGene_ENSMUSG00000041220.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	129426779	129418082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_129422080_129426704
ES.22585.2	chr3	-	4165	1	Antisense	novelGene_ENSMUSG00000041220.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCGG	NA	False	NA	NA	False	NA	NA	NA	129422247	129418082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_129418100_129422200
ES.22586.1	chr3	-	1779	1	Intergenic	novelGene_18581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAATAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	129442249	129440470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129440500_129442200
ES.22587.1	chr3	-	181	1	Intergenic	novelGene_18582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	129453064	129452883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129452900_129453100
ES.22588.1	chr3	+	7016	2	Intergenic	novelGene_18583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	129454865	129467056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129454982_129460156
ES.22588.2	chr3	+	1660	4	Intergenic	novelGene_18584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	10.3708994574027	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAACGGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	129460070	129467049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129460346_129464737_129465057_129465940_129466907_129466949
ES.22588.3	chr3	+	4744	2	Intergenic	novelGene_18585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGGTTTCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	129460518	129467053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129465237_129467027
ES.22588.4	chr3	+	4152	2	Intergenic	novelGene_18586	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	894	False	NA	NA	False	NA	NA	NA	129462841	129467055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129465462_129465523
ES.22589.1	chr3	-	4096	19	NIC	ENSMUSG00000028017.8	novel	3346	19	NA	NA	0	805	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.07869376883042	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTCTAAGGTCTTTGA	NA	False	NA	NA	False	AATACA	-13	NA	129518735	129470408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129472205_129474747_129474854_129476839_129476961_129479833_129480002_129484419_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496104_129496231_129499752_129499900_129500924_129501026_129504901_129505126_129506602_129506708_129510278_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129518702
ES.22589.2	chr3	-	4494	18	NNC	ENSMUSG00000028017.8	novel	3346	19	NA	NA	1688	0	intron_retention	FALSE	canonical	0	0	junction_2	1.0973387121281	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTTTATTACAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	129517038	129471228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129472205_129474747_129474854_129476839_129476961_129479833_129480002_129480156_129480266_129484419_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496104_129496231_129499752_129499900_129500924_129501026_129504901_129505126_129506602_129506708_129510278_129511710_129512705_129512832_129513879_129514003_129516918
ES.22589.3	chr3	-	177	1	Intergenic	novelGene_18587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	129483324	129483147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129483100_129483300
ES.22589.4	chr3	-	154	1	Intergenic	novelGene_18588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129485356	129485202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129485200_129485400
ES.2259.1	chr10	-	836	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4203772	4202936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4202900_4203800
ES.22590.1	chr3	+	3643	1	Intergenic	novelGene_18589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAACCCAACCAAACCAAA	838	False	NA	NA	False	NA	NA	NA	129534493	129538136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_129534500_129538100
ES.22591.1	chr3	+	477	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4162	1988	4162	-1988	3prime_fragment	FALSE	canonical	3	92	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGATCCCTGTTTGCT	NA	False	NA	13	True	NA	NA	NA	129551568	129555545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129551788_129555287
ES.22591.2	chr3	+	2472	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4162	-7	4162	7	3prime_fragment	FALSE	canonical	3	92	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTCTAATTCTCTCT	NA	False	NA	9	True	NA	NA	NA	129551568	129557540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129551788_129555287
ES.22592.1	chr3	-	175	1	FSM	ENSMUSG00000028012.16	ENSMUST00000196281.2	3005	1	2830	0	2830	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGGAAAGAAGAGG	630	False	NA	NA	False	NA	NA	NA	129613277	129613102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129613100_129613300
ES.22593.1	chr3	-	1037	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	1	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGAACGGAACCTAT	NA	False	NA	0	True	AATAAA	-23	NA	129624784	129618559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
ES.22593.11	chr3	-	3196	5	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-201	1	intron_retention	FALSE	canonical	3	1505	junction_2	103.258171589468	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624782	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618859_129619196_129619266_129620472_129622614_129622985_129623141_129624243
ES.22593.12	chr3	-	2107	6	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	1	intron_retention	FALSE	canonical	3	868	junction_5	370.381749010396	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624784	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129624503_129624766
ES.22593.13	chr3	-	3901	3	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-196	1	intron_retention	FALSE	canonical	3	1505	junction_1	78.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624777	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129619266_129620472_129623141_129624243
ES.22593.14	chr3	-	2105	6	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-205	1	intron_retention	FALSE	canonical	0	0	junction_5	695.876253366933	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624786	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129623408
ES.22593.15	chr3	-	2923	3	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	0	1	intron_retention	FALSE	canonical	2	5	junction_2	986.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129625045	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129620624_129622553_129623141_129624766
ES.22593.16	chr3	-	1004	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-213	1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_3	606.558048884579	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624794	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129618859_129619196_129619266_129620472_129620614_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ES.22593.17	chr3	-	368	2	NNC	ENSMUSG00000028010.17	novel	418	2	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624987	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129618800_129624852
ES.22593.19	chr3	-	3515	4	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-182	1	intron_retention	FALSE	canonical	3	1505	junction_1	99.5199589138893	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624763	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129619266_129620472_129622614_129622985_129623141_129624243
ES.22593.2	chr3	-	1289	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	-17	-1	-17	1	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGAACGGAACCTAT	NA	False	NA	0	True	AATAAA	-23	NA	129625062	129618559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ES.22593.20	chr3	-	4760	2	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	57	1	intron_retention	FALSE	canonical	2	5	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624952	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129623141_129624766
ES.22593.22	chr3	-	6217	1	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624784	129618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618600_129624800
ES.22593.23	chr3	-	2735	4	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	268	7	-196	0	intron_retention	FALSE	canonical	3	1505	junction_2	222.73901020402	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624777	129618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553
ES.22593.24	chr3	-	1638	5	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-202	0	intron_retention	FALSE	canonical	3	1505	junction_2	192.898127258924	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624783	129618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129623141_129624243
ES.22593.25	chr3	-	2373	5	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	258	7	-206	0	intron_retention	FALSE	canonical	3	1505	junction_2	196.138344032981	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624787	129618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985
ES.22593.26	chr3	-	4307	3	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	266	0	intron_retention	FALSE	canonical	3	1506	junction_1	78	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624315	129618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618859_129619196_129623141_129624243
ES.22593.27	chr3	-	5301	3	NNC	ENSMUSG00000028010.17	novel	418	2	NA	NA	202	-1	intron_retention	TRUE	canonical	0	0	junction_2	753	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTACGTTTATTGAAC	NA	False	NA	-9	True	AATAAA	-14	NA	129624807	129618568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129618859_129619196_129622918_129623517
ES.22593.29	chr3	-	291	2	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	232	5698	196	-3767	5prime_fragment	FALSE	canonical	3	868	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACGTGTCGTCTGTAAG	NA	False	NA	NA	False	AATAAA	-20	NA	129624813	129624258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129624503_129624766
ES.22593.5	chr3	-	1556	6	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	16	-1	intron_retention	FALSE	canonical	3	868	junction_5	374.403311951163	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTATTGAACGGAACCT	NA	False	NA	-2	True	AATAAA	-21	NA	129624993	129618561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ES.22593.6	chr3	-	3917	3	ISM	ENSMUSG00000028010.17	ENSMUST00000149071.2	685	4	-199	-1930	-199	-1	intron_retention	FALSE	canonical	3	1745	junction_2	116.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTATTGAACGGAACCT	NA	False	NA	-2	True	AATAAA	-21	NA	129624780	129618561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129620624_129622553_129622614_129622985
ES.22593.7	chr3	-	4697	3	ISM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	241	2	205	-2	intron_retention	FALSE	canonical	3	1505	junction_2	0.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTATTGAACGGAACC	NA	False	NA	-3	True	AATAAA	-20	NA	129624804	129618562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129618859_129619196_129619266_129620472
ES.22593.8	chr3	-	5007	2	FSM	ENSMUSG00000028010.17	ENSMUST00000127864.2	522	2	-3849	-636	-197	0	multi-exon	FALSE	canonical	3	1505	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACGTTTATTGAACGGAA	NA	False	NA	-5	True	AATAAA	-18	NA	129624778	129618564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129619266_129620472
ES.22593.9	chr3	-	2684	5	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-212	1	intron_retention	FALSE	canonical	2	5	junction_4	691.254430365549	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	False	NA	-7	True	AATAAA	-16	NA	129624793	129618566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129618859_129619196_129619266_129620472_129622614_129622985_129623141_129624766
ES.22594.1	chr3	-	155	1	Intergenic	novelGene_18590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	129654288	129654133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129654100_129654300
ES.22595.1	chr3	-	174	1	Intergenic	novelGene_18591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTCTTAAG	9981	False	NA	0	True	NA	NA	NA	129668459	129668285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129668300_129668500
ES.22596.1	chr3	+	1568	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	-16	9	-16	-5	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672238	129689465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ES.22596.2	chr3	+	3675	3	ISM	ENSMUSG00000027999.16	ENSMUST00000196838.5	625	5	-201	1397	7	-1397	5prime_fragment	FALSE	canonical	3	341	junction_1	2.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGAGTGCCAGATGGGA	NA	False	NA	NA	False	AATAAA	-24	NA	129672261	129687191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_129672585_129682529_129682607_129683916
ES.22596.3	chr3	+	1014	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	16	531	16	337	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTAAGGACTTTTCAG	NA	False	NA	14	True	AATAAA	-21	NA	129672270	129688943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ES.22596.4	chr3	+	1687	5	FSM	ENSMUSG00000027999.16	ENSMUST00000196838.5	625	5	-185	-877	23	-5	multi-exon	FALSE	canonical	1	2	junction_3	170.509530525423	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTCCTGAGAGTGTT	NA	False	NA	16	True	AATAAA	-16	NA	129672277	129689465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129687307_129687466_129688486
ES.22596.5	chr3	+	2850	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	43	-1332	43	1332	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATGTATGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	129672297	129690806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ES.22597.1	chr3	-	177	1	Intergenic	novelGene_18592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGCCAAAACTTCA	7713	False	NA	NA	False	NA	NA	NA	129675591	129675414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129675400_129675600
ES.22598.1	chr3	+	1317	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	-4	143	-4	-143	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTCCTATGTTTATGTG	NA	False	NA	17	True	AATAAA	-26	NA	129695069	129707609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ES.22598.2	chr3	+	1455	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	0	1	0	-1	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGGCACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-13	NA	129695073	129707751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ES.22598.3	chr3	+	1469	8	NNC	ENSMUSG00000027997.10	novel	1456	7	NA	NA	-5	-141	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	59.7156527526366	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTATGTTTATGTGAT	NA	False	NA	19	True	AATAAA	-28	NA	129695101	129707611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_129695156_129696392_129696575_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ES.22599.1	chr3	+	482	1	FSM	ENSMUSG00000063328.7	ENSMUST00000076703.7	567	1	155	-70	155	70	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTACAGATCTAAACAG	9324	False	NA	NA	False	NA	NA	NA	129862215	129862697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_129862200_129862700
ES.226.1	chr1	-	164	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAACAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	33766537	33766373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33766400_33766500
ES.2260.1	chr10	-	4914	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4218558	4213644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4213600_4218600
ES.2260.10	chr10	-	2259	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTGTGGTGGTACAC	NA	False	NA	NA	False	NA	NA	NA	4272929	4270670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4270700_4272900
ES.2260.11	chr10	-	4389	1	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCAGAAGCAGCAGCC	NA	False	NA	NA	False	AAAACA	-11	NA	4279938	4275549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4275500_4279900
ES.2260.12	chr10	-	165	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4287644	4287479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4287500_4287600
ES.2260.2	chr10	-	1171	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGCAGCCAATAAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	4216664	4215493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4215500_4216700
ES.2260.3	chr10	-	2247	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTCGTAGCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4218558	4216311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4216300_4218600
ES.2260.4	chr10	-	5614	4	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTCGTAGCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4308821	4216311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4216667_4263740_4263857_4303140_4307938_4308475
ES.2260.5	chr10	-	3179	3	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTCGTAGCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4305847	4216311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4216664_4263736_4263857_4303140
ES.2260.6	chr10	-	3130	3	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGGGGACGCGCTCGT	NA	False	NA	NA	False	NA	NA	NA	4305845	4216365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4216684_4263749_4263857_4303140
ES.2260.7	chr10	-	1322	1	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGTCTCTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	4230447	4229125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4229100_4230400
ES.2260.8	chr10	-	177	1	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4238438	4238261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4238300_4238400
ES.2260.9	chr10	-	1143	3	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4265461	4264180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4264885_4264939_4265092_4265174
ES.22600.1	chr3	-	5636	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	45	-553	45	553	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGGTTCGATATTAT	NA	False	NA	NA	False	ACTAAA	-15	NA	129854511	129775854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.10	chr3	-	5332	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	75	-5	intron_retention	FALSE	canonical	3	129	junction_19	16.7871950413216	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTGTGGAGTGCAATT	NA	False	NA	-5	True	TATAAA	-17	NA	129854481	129776412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.11	chr3	-	4427	24	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-102	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	49.8030146140802	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTGTGGAGTGCAAT	NA	False	NA	-6	True	TATAAA	-16	NA	129834614	129776413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129824180_129824307_129827479_129827624_129834322
ES.22600.15	chr3	-	4748	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	-42	422	-42	262	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGGTGGTTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-19	NA	129854598	129776829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.16	chr3	-	4715	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-116	260	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854672	129776831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
ES.22600.17	chr3	-	3622	21	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	59	260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	39.874678682091	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854497	129776831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129854217
ES.22600.19	chr3	-	3596	22	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	229	260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	46.4497387645239	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854327	129776831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129854217
ES.22600.2	chr3	-	5142	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	-14	0	-14	0	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854570	129776407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.20	chr3	-	4891	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	33	260	intron_retention	FALSE	canonical	3	129	junction_19	15.8698867603119	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854523	129776831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.21	chr3	-	4795	25	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	35	260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	48.7739791453052	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGGTGGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	129854521	129776831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129824180_129824307_129827479_129827624_129834322_129835097_129854217
ES.22600.23	chr3	-	4659	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	35	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	37.2301380040875	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129854521	129776832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814195_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.27	chr3	-	4220	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	39	259	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	36.8305994460524	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129854517	129776832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129834619_129835062_129835097_129854217
ES.22600.29	chr3	-	4874	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	54	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	54.6426438372069	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129854502	129776832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129800082_129800413_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
ES.22600.3	chr3	-	5101	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854634	129776407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
ES.22600.31	chr3	-	4641	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-9936	259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	48.6308194175486	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129865138	129776832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129835304_129835400_129864956
ES.22600.33	chr3	-	6043	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-2195	259	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	37.4392008704078	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129836983	129776832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129835304
ES.22600.36	chr3	-	4712	25	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	84	257	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	48.1092326262734	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGTTTGGTGGTTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	129854472	129776834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129835304_129835400_129854217
ES.22600.37	chr3	-	4607	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	49	257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	37.7962901131024	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGTTTGGTGGTTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	129854507	129776834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793205_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ES.22600.38	chr3	-	4850	26	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	213	257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.4540733694213	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGTTTGGTGGTTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	129854343	129776834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129819270_129819507_129824180_129824307_129827479_129827624_129834322_129835097_129854217
ES.22600.40	chr3	-	4417	22	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	35	257	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	38.9144069177424	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGTTTGGTGGTTTG	NA	False	NA	-7	True	ATTAAA	-14	NA	129854521	129776834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129834322_129835097_129854217
ES.22600.41	chr3	-	4622	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	50	255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	49.8446357461403	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTTGGTTTGGTGGTT	NA	False	NA	-9	True	ATTAAA	-12	NA	129854506	129776836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827486_129827624_129834342_129835097_129854217
ES.22600.42	chr3	-	5123	21	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	38584	429	8544	255	3prime_fragment	FALSE	canonical	3	129	junction_20	17.3852667509015	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTTGGTTTGGTGGTT	6567	False	NA	-9	True	ATTAAA	-12	NA	129815972	129776836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186
ES.22600.43	chr3	-	5238	5	NNC	ENSMUSG00000001052.16	novel	306	2	NA	NA	36	-14844	intron_retention	FALSE	canonical	0	0	junction_2	82.0624761995396	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTCTGTCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	129854520	129818277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129818760_129819270_129819507_129824180_129827624_129834322_129835097_129854217
ES.22600.44	chr3	-	1739	3	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	37	50553	37	7944	5prime_fragment	FALSE	canonical	3	160	junction_2	4.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTCTGGCTAATCTGT	NA	False	NA	NA	False	NA	NA	NA	129854519	129826960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129827624_129834322_129835097_129854217
ES.22600.45	chr3	-	1667	2	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	55	57306	55	1191	5prime_fragment	FALSE	canonical	3	160	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATGCCACTGTGTATC	NA	False	NA	NA	False	GATAAA	-29	NA	129854501	129833713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129835097_129854217
ES.22600.6	chr3	-	3267	18	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	-16941	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	65.8419518981461	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGGAGTGCAATTTTA	3057	False	NA	-2	True	TATAAA	-20	NA	129801087	129776409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789760_129789989_129790036_129790329_129790449_129793160_129793274_129795953_129796058_129796588_129796716_129798642_129798746_129801059
ES.22600.7	chr3	-	4503	24	NNC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	74	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	44.3251007417422	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGGAGTGCAATTTTA	NA	False	NA	-2	True	TATAAA	-20	NA	129854482	129776409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129834619_129835062_129835097_129854217
ES.22600.8	chr3	-	4709	16	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	56293	3	-14117	-3	3prime_fragment	FALSE	canonical	3	136	junction_8	16.484335999164	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTGGAGTGCAATTTT	5881	False	NA	-3	True	TATAAA	-19	NA	129798263	129776410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588
ES.22601.1	chr3	-	177	1	Intergenic	novelGene_18593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	129871913	129871736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129871700_129871900
ES.22602.1	chr3	-	177	1	Intergenic	novelGene_18594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	129879956	129879779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_129879800_129880000
ES.22603.1	chr3	-	177	1	Intergenic	novelGene_18595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGGAAGGAAGGAAGG	5666	False	NA	NA	False	NA	NA	NA	130035706	130035529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_130035500_130035700
ES.22604.1	chr3	+	3958	1	Intergenic	novelGene_18596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAATTCAATCGCCTGA	6073	False	NA	NA	False	NA	NA	NA	130480676	130484634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130480700_130484600
ES.22605.1	chr3	-	1067	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGGACTTTTTGTTG	NA	False	NA	0	True	AATAAA	-23	NA	130503094	130489561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ES.22605.2	chr3	-	3487	3	NIC	ENSMUSG00000041084.9	novel	1067	4	NA	NA	9	0	intron_retention	FALSE	canonical	3	1781	junction_1	139.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGAGTGTGGACTTT	NA	False	NA	-6	True	AATAAA	-17	NA	130503084	130489567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_130490128_130496964_130499693_130502885
ES.22605.3	chr3	-	1005	5	NNC	ENSMUSG00000041084.9	novel	1067	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	862.236771426503	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGAGTGTGGACT	NA	False	NA	-8	True	AATAAA	-15	NA	130503094	130489569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130489805_130489858_130490128_130496964_130497163_130499598_130499693_130502885
ES.22605.4	chr3	-	5023	1	FSM	ENSMUSG00000041084.9	ENSMUST00000197152.2	704	1	-4321	2	-4321	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGAGTGTGGACT	NA	False	NA	-8	True	AATAAA	-15	NA	130494592	130489569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130489600_130494600
ES.22605.5	chr3	-	919	3	NIC	ENSMUSG00000041084.9	novel	1067	4	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	2	40	junction_2	870.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGAGTGTGGACT	NA	False	NA	-8	True	AATAAA	-15	NA	130503048	130489569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_130490128_130496964_130497163_130502885
ES.22605.6	chr3	-	1051	4	NNC	ENSMUSG00000041084.9	novel	1067	4	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	917.333454457356	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGAGTGTGGACT	NA	False	NA	-8	True	AATAAA	-15	NA	130503074	130489569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130490128_130496964_130497163_130499598_130499705_130502885
ES.22605.7	chr3	-	839	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	2	226	2	-219	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCAGCTTTTGGACATG	NA	False	NA	0	True	AATAAA	-22	NA	130503091	130489786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ES.22606.1	chr3	-	159	1	Intergenic	novelGene_18597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	130511867	130511708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_130511700_130511900
ES.22607.1	chr3	-	553	5	FSM	ENSMUSG00000062006.13	ENSMUST00000196202.5	495	5	-9	-49	4	4	multi-exon	FALSE	canonical	3	274	junction_4	3611.9776092883	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATCTGTGATTTGTTTA	NA	False	NA	-7	True	AATAAA	-24	NA	130523979	130520475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523837
ES.22607.10	chr3	-	905	5	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	3721.33762073532	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130523983	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130523440_130523966
ES.22607.11	chr3	-	714	6	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	4156.35626961886	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130523992	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523151_130523440_130523966
ES.22607.12	chr3	-	1638	3	NIC	ENSMUSG00000062006.13	novel	624	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	7006	junction_1	1307.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130523990	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_130520609_130522396_130522800_130522877
ES.22607.13	chr3	-	467	6	NNC	ENSMUSG00000062006.13	novel	480	5	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	4161.39258421986	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130523990	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523396_130523440_130523966
ES.22607.14	chr3	-	3328	2	ISM	ENSMUSG00000062006.13	ENSMUST00000133802.6	711	4	-30	-1494	-17	1	intron_retention	FALSE	canonical	3	8385	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130524013	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_130522501_130522699
ES.22607.2	chr3	-	557	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	-69	-8	-69	0	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	False	NA	-11	True	AATAAA	-20	NA	130524116	130520479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
ES.22607.3	chr3	-	621	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	3	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	False	NA	-11	True	AATAAA	-20	NA	130523983	130520479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ES.22607.4	chr3	-	808	5	NNC	ENSMUSG00000062006.13	novel	624	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	3714.20788998139	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	-14	True	AATAAA	-17	NA	130523968	130520482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523564
ES.22607.5	chr3	-	3520	1	FSM	ENSMUSG00000062006.13	ENSMUST00000199001.2	573	1	-2947	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	-14	True	AATAAA	-17	NA	130524002	130520482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130520500_130524000
ES.22607.6	chr3	-	1534	3	ISM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	-17	3	-7	0	intron_retention	FALSE	canonical	3	7006	junction_1	689.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	-14	True	AATAAA	-17	NA	130524003	130520482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_130520609_130522396_130522501_130522699
ES.22607.8	chr3	-	3220	3	FSM	ENSMUSG00000062006.13	ENSMUST00000200517.2	1232	3	13	-2001	1	2	multi-exon	FALSE	canonical	3	8385	junction_1	618	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCTTCCGTTATCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	130523982	130520485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_130522501_130522699_130522800_130522877
ES.22607.9	chr3	-	3406	2	NIC	ENSMUSG00000062006.13	novel	495	5	NA	NA	0	1	intron_retention	FALSE	canonical	3	9621	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	False	NA	-18	True	AATAAA	-13	NA	130523970	130520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_130522800_130522877
ES.22608.1	chr3	+	184	1	Intergenic	novelGene_18598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	130529144	130529328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130529100_130529300
ES.22609.1	chr3	-	172	1	Intergenic	novelGene_18599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAACCTCTCCATA	NA	False	NA	NA	False	NA	NA	NA	130673825	130673653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_130673700_130673800
ES.2261.1	chr10	-	3093	4	NNC	ENSMUSG00000075327.11	novel	3226	3	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.1509182302316	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATCGTTTTCTTGCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	4338078	4317072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4319852_4324569_4324755_4337844_4337921_4338025
ES.2261.10	chr10	-	1959	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	-1	1128	-1	-1121	multi-exon	FALSE	canonical	3	11	junction_2	37	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACAACTAGAATATA	NA	False	NA	NA	False	NA	NA	NA	4337476	4318202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4319852_4324569_4324755_4337351
ES.2261.3	chr10	-	3187	4	NNC	ENSMUSG00000075327.11	novel	3226	3	NA	NA	-69	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.1509182302316	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATCGTTTTCTTGCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	4338177	4317072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4319852_4324569_4324755_4337844_4337912_4338021
ES.2261.4	chr10	-	3114	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	-27	-1	-27	1	multi-exon	FALSE	canonical	3	11	junction_2	37	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATCGTTTTCTTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	4337502	4317073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4319852_4324569_4324755_4337351
ES.2261.5	chr10	-	5161	3	NNC	ENSMUSG00000075327.11	novel	3226	3	NA	NA	81	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATCGTTTTCTTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	4338027	4317073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4321867_4324569_4324755_4337844
ES.2261.6	chr10	-	3062	2	NIC	ENSMUSG00000075327.11	novel	3226	3	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4338129	4317074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4319852_4337844
ES.2261.7	chr10	-	4026	2	ISM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	11656	1	-1944	-1	3prime_fragment	FALSE	canonical	3	85	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGATCGTTTTCTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	4325819	4317075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_4319852_4324569
ES.2261.8	chr10	-	3058	3	NNC	ENSMUSG00000075327.11	novel	3086	3	NA	NA	-302	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCATGTGATCGTTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	4337777	4317078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4319852_4324569_4324755_4337677
ES.2261.9	chr10	-	2805	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	-1	282	-1	-275	multi-exon	FALSE	canonical	3	11	junction_2	37	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCCTCCAGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4337476	4317356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4319852_4324569_4324755_4337351
ES.22610.1	chr3	+	177	1	Intergenic	novelGene_18600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130856077	130856254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130856100_130856300
ES.22611.1	chr3	+	157	1	Intergenic	novelGene_18601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130870536	130870693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130870500_130870700
ES.22612.1	chr3	+	174	1	Intergenic	novelGene_18602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTCATCAATAG	1500	False	NA	NA	False	NA	NA	NA	130875674	130875848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130875700_130875800
ES.22613.1	chr3	+	3568	10	FSM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	-211	0	-211	0	multi-exon	FALSE	canonical	3	22	junction_9	8.71779788708135	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTGGTGAACTGAACC	NA	False	NA	NA	False	AATAAA	-17	NA	130903908	131018005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
ES.22613.10	chr3	+	181	1	Intergenic	novelGene_18605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCGAG	NA	False	NA	NA	False	NA	NA	NA	130993041	130993222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_130993000_130993200
ES.22613.2	chr3	+	3600	11	FSM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	-201	-1	-201	1	multi-exon	FALSE	canonical	3	14	junction_9	10.581115253129	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTGGTGAACTGAACCC	NA	False	NA	NA	False	AATAAA	-18	NA	130903918	131018006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ES.22613.3	chr3	+	3589	11	NIC	ENSMUSG00000027985.15	novel	3482	12	NA	NA	-183	-35	combination_of_known_junctions	TRUE	canonical	1	2	junction_6	15.8773423468791	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTTATTAAGAATAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	130903936	131017970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130984671_130984756_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
ES.22613.4	chr3	+	2980	11	FSM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	-165	583	-165	-583	multi-exon	FALSE	canonical	3	14	junction_9	10.581115253129	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTTTTACGTTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	130903954	131017422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ES.22613.5	chr3	+	3060	12	FSM	ENSMUSG00000027985.15	ENSMUST00000029611.14	3482	12	-160	582	-160	-582	multi-exon	FALSE	canonical	1	2	junction_6	15.8134789247173	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTTACGTTTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	130903959	131017423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130984671_130984756_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ES.22613.6	chr3	+	2901	10	FSM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	-147	603	-147	-603	multi-exon	FALSE	canonical	3	22	junction_9	8.71779788708135	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAGATGAAAA	NA	False	NA	NA	False	NA	NA	NA	130903972	131017402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
ES.22613.7	chr3	+	2040	9	NNC	ENSMUSG00000027985.15	novel	3482	12	NA	NA	70532	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.8901943830891	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTCATTTTATTAAG	NA	False	NA	NA	False	AATAAA	-11	NA	130978036	131017963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_130978130_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ES.22613.8	chr3	+	1949	7	ISM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	74136	35	70751	-35	3prime_fragment	FALSE	canonical	3	22	junction_6	7.8049129826454	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTTATTAAGAATAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	130978255	131017970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
ES.22613.9	chr3	+	1959	8	ISM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	74169	33	70784	-33	3prime_fragment	FALSE	canonical	3	14	junction_6	10.1820169606888	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATTAAGAATAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	130978288	131017972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ES.22614.1	chr3	-	216	1	Intergenic	novelGene_18603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTGTATGGCAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	130934456	130934240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_130934200_130934500
ES.22615.1	chr3	-	195	1	Intergenic	novelGene_18604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATTTATTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	130992207	130992012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_130992000_130992200
ES.22616.1	chr3	+	182	1	Antisense	novelGene_ENSMUSG00000027984.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGACTTTCCC	NA	False	NA	NA	False	NA	NA	NA	131040848	131041030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_131040800_131041000
ES.22617.1	chr3	-	1782	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	4	3	4	-3	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGGGCCTGTCTTCTC	NA	False	NA	NA	False	AATAAA	-44	NA	131065746	131027070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ES.22617.11	chr3	-	1687	8	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	-23	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	268.571732522624	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACTTAAAAGCATAAAATC	NA	False	NA	NA	False	AATAAA	-11	NA	131065696	131027103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042076_131042223_131043451_131043581_131065524
ES.22617.12	chr3	-	1237	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	30	522	30	-522	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAACATCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131065720	131027589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ES.22617.13	chr3	-	628	2	ISM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	29568	6981	29491	4701	internal_fragment	FALSE	canonical	3	722	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAATCAGGAAGAAT	NA	False	NA	NA	False	AATACA	-22	NA	131036182	131034048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_131034659_131036164
ES.22617.2	chr3	-	3223	7	NIC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	-23	-18	intron_retention	FALSE	canonical	3	722	junction_3	31.6899037549816	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTAAGTAATTATAAACA	NA	False	NA	NA	False	AATAAA	-29	NA	131065696	131027085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_131027937_131029191_131029309_131034585_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ES.22617.3	chr3	-	4301	7	NIC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	24	-18	intron_retention	FALSE	canonical	3	722	junction_3	31.6899037549816	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTAAGTAATTATAAACA	NA	False	NA	NA	False	AATAAA	-29	NA	131065726	131027085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131038936_131042064_131042223_131043451_131043581_131065524
ES.22617.5	chr3	-	1295	6	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	24067	-30	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	295.64343388616	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCATAAAATCCTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	131041606	131027097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131041557
ES.22617.9	chr3	-	2143	9	NNC	ENSMUSG00000027984.9	novel	1789	8	NA	NA	-24	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	333.900036500447	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGCATAAAATCCTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	131065697	131027098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131037394_131037833_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ES.22618.1	chr3	+	159	1	Antisense	novelGene_ENSMUSG00000106268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	131078445	131078604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_131078400_131078600
ES.22619.1	chr3	+	130	1	Intergenic	novelGene_18606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	131093165	131093295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_131093200_131093300
ES.2262.1	chr10	+	3749	1	FSM	ENSMUSG00000095123.2	ENSMUST00000178920.2	4838	1	-2937	4026	-2937	-4026	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATCTAGTCTCCAAGTC	4105	False	NA	NA	False	ATTAAA	-18	NA	4338649	4342398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4338600_4342400
ES.22620.1	chr3	-	3444	5	NNC	ENSMUSG00000027983.14	novel	4378	5	NA	NA	4828	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	1.6583123951777	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGTCAGCTCGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	131092021	131082091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131082657_131082994_131084957_131087165_131087334_131089036_131089199_131091434
ES.22620.2	chr3	-	2902	5	FSM	ENSMUSG00000027983.14	ENSMUST00000106337.7	4378	5	24	1452	0	-1452	multi-exon	FALSE	canonical	1	2	junction_1	0.866025403784439	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGTCTCCAAGCTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	131096849	131083541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131084957_131087165_131087334_131089036_131089199_131091434_131092071_131096328
ES.22620.3	chr3	-	2289	5	FSM	ENSMUSG00000027983.14	ENSMUST00000106337.7	4378	5	39	2050	15	-2050	multi-exon	FALSE	canonical	1	2	junction_1	0.866025403784439	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTGTTGTCCACCCGT	NA	False	NA	NA	False	AATGAA	-12	NA	131096834	131084139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131084957_131087165_131087334_131089036_131089199_131091434_131092071_131096328
ES.22620.4	chr3	-	3387	3	NIC	ENSMUSG00000027983.14	novel	1716	4	NA	NA	32	0	intron_retention	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATGGACAGCAGT	NA	False	NA	NA	False	NA	NA	NA	131096817	131086936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_131089199_131091434_131092071_131096328
ES.22620.5	chr3	-	1688	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	1	27	1	-27	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131096848	131086963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ES.22620.6	chr3	-	648	2	NNC	ENSMUSG00000027983.14	novel	4378	5	NA	NA	-5	-7808	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAGTGACTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	131096854	131095880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131096003_131096328
ES.22621.1	chr3	-	5638	6	NNC	ENSMUSG00000050931.8	novel	5801	6	NA	NA	209	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	2.31516738055805	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGAATTTCGGCCTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	131196031	131112633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131116960_131118587_131118755_131123971_131124126_131129813_131129932_131135417_131136110_131195850
ES.22621.2	chr3	-	5614	6	NNC	ENSMUSG00000050931.8	novel	5801	6	NA	NA	306	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.26190128606002	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGAATTTCGGCCTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	131196866	131112633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_131116960_131118587_131118755_131123971_131124126_131129813_131129932_131135417_131136110_131196709
ES.22622.1	chr3	+	2628	13	NIC	ENSMUSG00000028032.14	novel	2811	15	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.1957139424978	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131270612	131349431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_131270745_131271708_131271822_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ES.22622.2	chr3	+	2486	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	113	1	-15	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131270641	131349431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ES.22622.3	chr3	+	4554	11	NNC	ENSMUSG00000028032.14	novel	2600	12	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_4	12.8903064354576	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATGGTTTGTGTGCA	NA	False	NA	4	True	AATAAA	-15	NA	131270674	131349429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131289813_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131313225_131324781_131325051_131337346_131337577_131348724
ES.22622.4	chr3	+	2863	14	NNC	ENSMUSG00000028032.14	novel	2811	15	NA	NA	656	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.8188712110104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131271351	131349431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_131271542_131271708_131271822_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ES.22622.5	chr3	+	1895	8	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	20147	1	20111	0	3prime_fragment	FALSE	canonical	3	28	junction_7	5.14682386704338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131290806	131349431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ES.22623.1	chr3	-	173	1	Intergenic	novelGene_18607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAAGAGTTTGC	2264	False	NA	NA	False	NA	NA	NA	131300919	131300746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_131300700_131300900
ES.22624.1	chr3	-	3736	1	FSM	ENSMUSG00000105973.2	ENSMUST00000198636.2	3344	1	-72	-320	-72	320	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGGTCTCAACAAGTC	2857	False	NA	NA	False	NA	NA	NA	131319613	131315877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_131315900_131319600
ES.22625.1	chr3	-	2443	1	Intergenic	novelGene_18608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131324569	131322126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_131322100_131324600
ES.22626.1	chr3	-	172	1	Intergenic	novelGene_18609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	131393425	131393253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_131393300_131393400
ES.22627.1	chr3	-	3513	1	FSM	ENSMUSG00000106313.2	ENSMUST00000196849.2	388	1	-2663	-462	-2663	462	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	132364206	132360693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132360700_132364200
ES.22628.1	chr3	+	116	1	Intergenic	novelGene_18610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	132382129	132382245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_132382100_132382200
ES.22629.1	chr3	+	6617	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-32	-7	-32	7	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCGTCTATCCACAGTG	NA	False	NA	90	True	ATTAAA	-19	NA	132389872	132547456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.12	chr3	+	6437	25	NIC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	-3	-71	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	21.4722042547	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGTGTATAGGAGTCC	NA	False	NA	12	True	AATAAA	-32	NA	132389901	132547378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_132390156_132392532_132392754_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.13	chr3	+	4903	23	NNC	ENSMUSG00000028030.13	novel	3170	24	NA	NA	-2	-27479	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	24.1279732035057	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAAACATTAA	NA	False	NA	NA	False	NA	NA	NA	132389902	132475116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132472553
ES.22629.14	chr3	+	1317	4	NNC	ENSMUSG00000028030.13	novel	5195	3	NA	NA	1	-2305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.0022221728417	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCATGATAATAAATTATT	NA	False	NA	NA	False	AATAAA	-17	NA	132389905	132402585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132400143_132400235_132401830
ES.22629.15	chr3	+	4081	25	NIC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	5	763	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	21.4722042547	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTTTTTTTTTTT	NA	False	NA	17	True	ATTAAA	-21	NA	132389909	132545030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_132390156_132392532_132392754_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.17	chr3	+	4031	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	6	2541	6	641	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	132389910	132544908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.18	chr3	+	1270	4	NNC	ENSMUSG00000028030.13	novel	3170	24	NA	NA	12	-2307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.0022221728417	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTCATGATAATAAATTA	NA	False	NA	NA	False	AATAAA	-15	NA	132389916	132402583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132400143_132400217_132401846
ES.22629.19	chr3	+	3831	23	NNC	ENSMUSG00000028030.13	novel	3170	24	NA	NA	-9	-20576	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	27.1800318659012	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTTACTGACCTTATTT	NA	False	NA	NA	False	AATAAA	-41	NA	132389919	132482019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132481315_132481571
ES.22629.2	chr3	+	2976	3	FSM	ENSMUSG00000028030.13	ENSMUST00000198147.5	5195	3	-50	2269	-26	-2269	multi-exon	FALSE	canonical	1	21	junction_1	47	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCCTTATTGAATGG	NA	False	NA	NA	False	AATAAA	-22	NA	132389878	132402621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143
ES.22629.20	chr3	+	6404	27	NNC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	-8	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	22.4881296761505	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGTGTATAGGAGTCC	NA	False	NA	12	True	AATAAA	-32	NA	132389920	132547378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721_132545424_132545510
ES.22629.21	chr3	+	3144	22	ISM	ENSMUSG00000028030.13	ENSMUST00000029664.8	3170	24	-27	43330	5	-43330	5prime_fragment	FALSE	canonical	1	21	junction_1	17.8306470098288	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAAAATAAACATAAA	NA	False	NA	NA	False	NA	NA	NA	132389933	132459265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268
ES.22629.23	chr3	+	4138	26	NNC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	-15	753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	22.838353705992	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGGTTTTTTTT	NA	False	NA	7	True	ATTAAA	-11	NA	132389945	132545020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456917_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.24	chr3	+	1533	7	ISM	ENSMUSG00000028030.13	ENSMUST00000029664.8	3170	24	20	77482	20	20223	5prime_fragment	FALSE	canonical	1	21	junction_1	28.9352725924606	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	132389980	132425113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380
ES.22629.25	chr3	+	3688	1	NIC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	18595	7353	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACGAAGGAGAAAGCAACA	NA	False	NA	NA	False	AAAAAG	-8	NA	132408555	132412243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_132408600_132412200
ES.22629.26	chr3	+	3656	1	NIC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	51049	-74	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGTGGTGTATAGGAG	NA	False	NA	9	True	AATAAA	-29	NA	132543719	132547375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_132543700_132547400
ES.22629.3	chr3	+	5363	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-6	1221	-6	-1221	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGATTCAGTGACTTGT	NA	False	NA	NA	False	NA	NA	NA	132389898	132546228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.4	chr3	+	3955	26	NNC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	-5	753	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	18.8372397128666	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGGTTTTTTTT	NA	False	NA	7	True	ATTAAA	-11	NA	132389899	132545020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132389957_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.5	chr3	+	5591	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-5	992	-5	-992	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTGAATTATTTACT	NA	False	NA	NA	False	ATTAAA	-23	NA	132389899	132546457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.7	chr3	+	4169	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-4	2413	-4	769	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	23	True	ATTAAA	-27	NA	132389900	132545036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.22629.9	chr3	+	4870	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	-4	1712	-4	1470	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTGTTTCAAAAGTG	NA	False	NA	NA	False	AATATA	-15	NA	132389900	132545737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ES.2263.1	chr10	-	175	1	Antisense	novelGene_ENSMUSG00000095123.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAATCCACAGA	NA	False	NA	NA	False	NA	NA	NA	4342818	4342643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4342600_4342800
ES.22630.1	chr3	-	1378	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	-240	-12	0	-6	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTGGTTTTTTGAT	NA	False	NA	-4	True	AATAAA	-43	NA	132389885	132366247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ES.22630.10	chr3	-	4186	1	FSM	ENSMUSG00000028029.12	ENSMUST00000199638.2	3958	1	-227	-1	59	1	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGAGACTTTTTAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	132389824	132385638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132385600_132389800
ES.22630.2	chr3	-	1194	8	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	420.409955415241	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCTTGCTCATTTTTT	NA	False	NA	-17	True	AATAAA	-30	NA	132389596	132366260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132366503_132367514_132367633_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ES.22630.3	chr3	-	2680	2	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	14059	4	4951	-4	3prime_fragment	FALSE	canonical	3	889	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTCTTGCTCATTT	NA	False	NA	-20	True	AATAAA	-27	NA	132375586	132366263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132366503_132373145
ES.22630.4	chr3	-	990	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	339.889892301741	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTCTTGCTCATTT	NA	False	NA	-20	True	AATAAA	-27	NA	132389595	132366263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132366503_132373145_132373315_132377821_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ES.22630.6	chr3	-	1656	7	NNC	ENSMUSG00000028029.12	novel	1126	7	NA	NA	0	-11	intron_retention	FALSE	canonical	0	0	junction_6	349.99654760202	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATATAAAATATGTCTTG	NA	False	NA	-27	True	AATAAA	-20	NA	132389597	132366270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132388964
ES.22630.7	chr3	-	1119	5	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	35	11040	-12	244	5prime_fragment	FALSE	canonical	3	854	junction_4	52.1745867257231	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAGTAGGACAGAAGT	NA	False	NA	NA	False	NA	NA	NA	132389610	132377299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ES.22630.8	chr3	-	3939	1	NIC	ENSMUSG00000028029.12	novel	1146	7	NA	NA	-739	206	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132381276	132377337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_132377300_132381300
ES.22630.9	chr3	-	953	5	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	51	11190	3	94	5prime_fragment	FALSE	canonical	3	854	junction_4	52.1745867257231	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	TATAAA	-33	NA	132389594	132377449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ES.22631.1	chr3	-	2471	1	Antisense	novelGene_ENSMUSG00000028030.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132428250	132425779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_132425800_132428200
ES.22632.1	chr3	-	4445	1	Intergenic	novelGene_18611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAGAAAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	132486205	132481760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_132481800_132486200
ES.22633.1	chr3	-	2869	1	FSM	ENSMUSG00000087776.3	ENSMUST00000157151.3	111	1	-473	-2285	-473	2285	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACGGAACGTGTACAC	NA	False	NA	NA	False	NA	NA	NA	132493569	132490700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132490700_132493600
ES.22634.1	chr3	-	159	1	Intergenic	novelGene_18612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	132539814	132539655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_132539700_132539800
ES.22635.1	chr3	-	2384	1	Antisense	novelGene_ENSMUSG00000028030.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACAAAAAACTTCT	NA	False	NA	NA	False	NA	NA	NA	132547416	132545032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_132545000_132547400
ES.22636.1	chr3	-	4678	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	-59	0	-59	0	multi-exon	FALSE	canonical	1	4	junction_10	2.17802700922017	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTTGGTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	132656111	132587505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
ES.22636.2	chr3	-	4562	11	NIC	ENSMUSG00000040998.19	novel	4619	12	NA	NA	-37	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.23882694814033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTCTTCCTTGGTTT	NA	False	NA	NA	False	AATAAA	-39	NA	132656089	132587506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132653807_132653909_132655733
ES.22636.3	chr3	-	4801	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	-264	-936	-133	-2	multi-exon	FALSE	canonical	2	2	junction_10	2.98491578142872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCCTCTTCCTTGGTT	NA	False	NA	NA	False	AATAAA	-38	NA	132656185	132587507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
ES.22636.4	chr3	-	4490	12	NNC	ENSMUSG00000040998.19	novel	4619	12	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	3.53728662878977	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCCTCTTCCTTGGT	NA	False	NA	NA	False	AATAAA	-37	NA	132655933	132587508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653902_132655733
ES.22636.5	chr3	-	4370	11	NNC	ENSMUSG00000040998.19	novel	4619	12	NA	NA	20240	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.34813380855664	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGCCTCTTCCTTGG	NA	False	NA	NA	False	AATAAA	-36	NA	132635335	132587509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132635160
ES.22636.6	chr3	-	4414	13	NNC	ENSMUSG00000040998.19	novel	3601	13	NA	NA	56	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.40240927709893	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTCCTACTGCCACC	NA	False	NA	NA	False	AATAAA	-22	NA	132655996	132587523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132589674_132589804_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
ES.22637.1	chr3	+	3112	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	-11	0	-11	0	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTAGATGTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	132797589	132816749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.2	chr3	+	1674	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	27	1400	27	-1400	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGATCTATTTATTT	NA	False	NA	8	True	ATTAAA	-20	NA	132797627	132815349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.3	chr3	+	3076	6	NIC	ENSMUSG00000028016.10	novel	3101	7	NA	NA	-14	-1438	intron_retention	FALSE	canonical	3	154	junction_1	13.9914259459142	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTGTTACATTAAAA	NA	False	NA	12	True	AATAAA	-18	NA	132797684	132815311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_132797738_132802508_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.4	chr3	+	2869	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	85	147	-13	-147	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAATTAAGCTTGGTC	NA	False	NA	NA	False	AATAAA	-26	NA	132797685	132816602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.5	chr3	+	2131	7	NNC	ENSMUSG00000028016.10	novel	3101	7	NA	NA	29	-1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.3668257155302	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTATTGTTTGTTAC	NA	False	NA	5	True	AATAAA	-11	NA	132797727	132815304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_132798340_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.6	chr3	+	2959	6	ISM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	4907	6	-3640	-6	3prime_fragment	FALSE	canonical	3	157	junction_4	11.0815161417561	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGCCTGTAGATG	NA	False	NA	NA	False	AATAAA	-41	NA	132802507	132816743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ES.22637.7	chr3	+	2306	3	ISM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	10514	158	1967	-158	3prime_fragment	FALSE	canonical	3	157	junction_1	7.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAACTTTTAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	132808114	132816591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_132808278_132812699_132812847_132814595
ES.22638.1	chr3	-	4862	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	5	-1364	5	1364	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGGGACTGGAGCGATG	NA	False	NA	NA	False	AATAAA	-21	NA	132797581	132686148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.10	chr3	-	4550	11	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_10	57.7010398519819	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	-8	True	NA	NA	NA	132797537	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132796366
ES.22638.11	chr3	-	3537	12	FSM	ENSMUSG00000028018.16	ENSMUST00000080583.6	2394	12	-128	-1015	-128	-5	multi-exon	FALSE	canonical	2	5	junction_11	53.8152640486702	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	-8	True	NA	NA	NA	132797922	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797637
ES.22638.12	chr3	-	6124	11	NIC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	2	-5	intron_retention	FALSE	canonical	3	163	junction_1	18.3632785743723	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	-8	True	NA	NA	NA	132797584	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_132688981_132692145_132692216_132701926_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.13	chr3	-	3527	12	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	-5	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.729457999867	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGTCATGGCTCTCCGC	NA	False	NA	16	True	NA	NA	NA	132797591	132687530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704548_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.15	chr3	-	3405	12	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	15	-85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	54.2021011455741	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAATACATAGATTTTT	NA	False	NA	-51	True	TTTAAA	-20	NA	132797571	132687597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788259_132790325_132790787_132797340
ES.22638.16	chr3	-	2766	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	12	725	12	295	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATTTAGATGTAAATT	NA	False	NA	NA	False	ACTAAA	-16	NA	132797574	132688237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.17	chr3	-	3074	1	NIC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	20048	216	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAAGTTTACTGCTG	NA	False	NA	NA	False	TATAAA	-18	NA	132691390	132688316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_132688300_132691400
ES.22638.18	chr3	-	2810	11	NIC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	16	216	intron_retention	FALSE	canonical	3	158	junction_3	20.3332240434221	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAAGTTTACTGCTG	NA	False	NA	NA	False	TATAAA	-18	NA	132797570	132688316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.2	chr3	-	3449	11	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	-1593	501	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	57.2912733319831	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAATGTTGCCTTTGC	750	False	NA	NA	False	NA	NA	NA	132790482	132687011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688976_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336
ES.22638.20	chr3	-	2615	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	-5	893	-5	127	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTTTTTTTTTTAAA	NA	False	NA	NA	False	TTTAAA	-16	NA	132797591	132688405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.21	chr3	-	3556	12	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	-19	127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.1778491907968	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTTTTTTTTTTAAA	NA	False	NA	NA	False	TTTAAA	-16	NA	132797558	132688405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132796366
ES.22638.22	chr3	-	2919	9	ISM	ENSMUSG00000028018.16	ENSMUST00000080583.6	2394	12	9821	1739	916	-1739	internal_fragment	FALSE	canonical	3	158	junction_2	11.8947204675015	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCAACCCCCAAAAGGT	3259	False	NA	NA	False	NA	NA	NA	132787973	132690271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799
ES.22638.23	chr3	-	2094	12	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	15	-3142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.9871430210324	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATAATTGCAATTGT	NA	False	NA	NA	False	AATAAA	-10	NA	132797571	132691674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132691751_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788274_132790344_132790787_132797340
ES.22638.24	chr3	-	3867	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	16	-2588	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTGTATGTATACATG	NA	False	NA	NA	False	NA	NA	NA	132797570	132707179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.25	chr3	-	4010	8	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	8	19694	8	-2615	5prime_fragment	FALSE	canonical	3	172	junction_4	17.628826115317	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGCCTGCTGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	132797578	132707206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.26	chr3	-	3837	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	-2	-2616	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.0557453266043	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCTGCTGAGTCA	NA	False	NA	NA	False	NA	NA	NA	132797588	132707207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709243_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.27	chr3	-	3865	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	-120	-2617	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	81.8672706275224	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGAGCCTGCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	132797914	132707208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709243_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797637
ES.22638.28	chr3	-	3687	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	-4	-2788	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTAGTGGTATTTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	132797590	132707379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.29	chr3	-	3795	8	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	49	19868	2	-2789	5prime_fragment	FALSE	canonical	3	172	junction_4	17.628826115317	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTAGTGGTATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	132797537	132707380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.3	chr3	-	3520	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	-16	-1	-16	1	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTCCTCTCAGATC	NA	False	NA	-2	True	NA	NA	NA	132797602	132687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.30	chr3	-	3501	8	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	-3	-2795	intron_retention	FALSE	canonical	0	0	junction_6	67.0004568976197	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATAACATTAGTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	132797589	132707386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790676_132790787_132797340
ES.22638.31	chr3	-	3409	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	15	-3047	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGTTGTCAGTCATAGAC	NA	False	NA	NA	False	NA	NA	NA	132797571	132707638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.32	chr3	-	204	1	FSM	ENSMUSG00000105217.2	ENSMUST00000196110.2	1726	1	1523	-1	1523	1	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTATCTCACATAATT	NA	False	NA	NA	False	AATAAA	-15	NA	132758508	132758304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_132758300_132758500
ES.22638.33	chr3	-	1813	7	Fusion	ENSMUSG00000105217.2_ENSMUSG00000028018.16	novel	1927	3	NA	NA	15	0	multi-exon	FALSE	canonical	0	0	junction_1	95.0235350964287	235	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATTATCTCACATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	132797571	132758305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_132758440_132758678_132758863_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.34	chr3	-	1974	5	ISM	ENSMUSG00000028018.16	ENSMUST00000161577.8	1975	10	-62	63255	16	19143	5prime_fragment	FALSE	canonical	3	172	junction_1	21.0520189055587	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCAGTTTCCTGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	132797570	132767846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.35	chr3	-	1672	4	ISM	ENSMUSG00000028018.16	ENSMUST00000080583.6	2394	12	-115	88898	-115	9559	5prime_fragment	FALSE	canonical	2	5	junction_3	95.2202126068247	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGACATCCTATCTGG	NA	False	NA	NA	False	NA	NA	NA	132797909	132777430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132777913_132787799_132788268_132790336_132790787_132797637
ES.22638.36	chr3	-	1486	4	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	15	9419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	97.5431528435834	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATGCATCTTATTTATA	NA	False	NA	NA	False	AATAAA	-19	NA	132797571	132777570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132777913_132787799_132788268_132790336_132790787_132797345
ES.22638.5	chr3	-	3452	12	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	-121	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.1778491907968	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTTTGACTCCTCTCAG	NA	False	NA	-5	True	NA	NA	NA	132797915	132687514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797718
ES.22638.6	chr3	-	3634	12	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.4065818795896	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTTTGACTCCTCTC	NA	False	NA	-7	True	NA	NA	NA	132797570	132687516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704793_132709346_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.7	chr3	-	3503	11	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.3241940526797	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	-8	True	NA	NA	NA	132797570	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711254_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ES.22638.8	chr3	-	3824	4	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	90741	5	4593	-5	3prime_fragment	FALSE	canonical	3	158	junction_3	4.49691252107735	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	NA	False	NA	-8	True	NA	NA	NA	132706845	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585
ES.22638.9	chr3	-	2557	10	NNC	ENSMUSG00000028018.16	novel	3503	12	NA	NA	6496	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	56.855458927675	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTTTGACTCCTCT	8839	False	NA	-8	True	NA	NA	NA	132782393	132687517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132782170
ES.22639.1	chr3	-	6272	11	NNC	ENSMUSG00000040969.15	novel	6541	14	NA	NA	32523	-3	intron_retention	FALSE	canonical	0	0	junction_4	0.670820393249937	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTTGTTTGTATTAAG	NA	False	NA	NA	False	TATAAA	-2	NA	132908127	132818041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_132822387_132837801_132838044_132838149_132838349_132839355_132839500_132843026_132843339_132846533_132846651_132847947_132848053_132852180_132852315_132855211_132855412_132882110_132882391_132907933
ES.2264.1	chr10	-	174	1	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4351549	4351375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4351400_4351500
ES.22640.1	chr3	+	1310	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	-80	-4	-80	0	multi-exon	TRUE	canonical	3	471	junction_4	36.8801946894343	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTATATATTTATTAAT	NA	False	NA	25	True	AATAAA	-32	NA	133015790	133083843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.10	chr3	+	1243	12	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	158.644881250885	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTGAACTTCTCTT	NA	False	NA	9	True	AATAAA	-16	NA	133015894	133083827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082403_133083607
ES.22640.11	chr3	+	1181	10	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	155.731567087904	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTATTATATTCATAA	NA	False	NA	NA	False	AATAAA	-10	NA	133015894	133083992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.12	chr3	+	993	10	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	155.731567087904	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015918	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.13	chr3	+	994	10	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	12461	-4	1103	0	3prime_fragment	FALSE	canonical	3	471	junction_2	39.4680680431881	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTATATATTTATTAAT	NA	False	NA	25	True	AATAAA	-32	NA	133028331	133083843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.14	chr3	+	2802	6	ISM	ENSMUSG00000028013.17	ENSMUST00000125858.5	1514	7	6825	15	-2142	0	3prime_fragment	FALSE	canonical	3	509	junction_5	21.8686990925386	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133051694	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.15	chr3	+	3067	3	ISM	ENSMUSG00000028013.17	ENSMUST00000125858.5	1514	7	31777	16	-1528	-1	3prime_fragment	FALSE	canonical	3	509	junction_2	29.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTGAACTTCTCTT	NA	False	NA	9	True	AATAAA	-16	NA	133076646	133083827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_133079454_133082309_133082350_133083607
ES.22640.2	chr3	+	1451	13	NNC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	204.600355707305	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015841	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133034868_133035076_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.3	chr3	+	2372	12	NNC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	158.577821967117	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015868	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133046266_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.4	chr3	+	1152	11	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	165.318601494206	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATACTAACATTTTG	NA	False	NA	-1	True	AATAAA	-6	NA	133015868	133083817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.5	chr3	+	1192	12	NNC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	159.20328498625	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015872	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_133016043_133026696_133026762_133028332_133028357_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.6	chr3	+	988	9	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	182.978653126533	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGAACTTCTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	133015878	133083828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.7	chr3	+	1373	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	12	-159	0	2	multi-exon	FALSE	canonical	3	471	junction_4	36.8801946894343	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATTCATAACTTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	133015882	133083998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ES.22640.8	chr3	+	1066	11	NIC	ENSMUSG00000028013.17	novel	1368	12	NA	NA	5	-9	combination_of_known_splicesites	FALSE	canonical	3	35	junction_10	200.148669743269	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACTAACATTTTGAA	NA	False	NA	1	True	AATAAA	-8	NA	133015887	133083819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
ES.22640.9	chr3	+	1373	1	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	11	-15062	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTTTCTGTTTGCTCC	NA	False	NA	NA	False	AATAAA	-25	NA	133015893	133017266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_133015900_133017300
ES.22641.1	chr3	-	3113	1	FSM	ENSMUSG00000105957.2	ENSMUST00000199187.2	2491	1	-630	8	-630	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAACATGAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	133016399	133013286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_133013300_133016400
ES.22642.1	chr3	-	170	1	Intergenic	novelGene_18613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATATTAGAGCCAAC	NA	False	NA	NA	False	NA	NA	NA	133096696	133096526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133096500_133096700
ES.22643.1	chr3	+	3942	1	Antisense	novelGene_ENSMUSG00000040943.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133176706	133180648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_133176700_133180600
ES.22644.1	chr3	+	9085	4	Antisense	novelGene_ENSMUSG00000040943.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATAAATC	NA	False	NA	NA	False	NA	NA	NA	133194930	133205555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_133195507_133195556_133197682_133198940_133202005_133202235
ES.22644.2	chr3	+	177	1	Intergenic	novelGene_18614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATAAATC	NA	False	NA	NA	False	NA	NA	NA	133202018	133202195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_133202000_133202200
ES.22645.1	chr3	-	8972	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	31540	11009	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	68.2871913016473	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTCTCATGAGAC	NA	False	NA	NA	False	NA	NA	NA	133218507	133158430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133158439_133169455_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133218391
ES.22645.11	chr3	-	13568	9	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	102	junction_8	35.4486865059906	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	-5	True	AATAAA	-24	NA	133250051	133169439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.12	chr3	-	17997	8	NNC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-5	0	intron_retention	TRUE	non_canonical	0	0	junction_4	79.4092987923573	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	-5	True	AATAAA	-24	NA	133250068	133169439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133187305_133187495_133189079_133191272_133194479_133219789_133219935_133249967
ES.22645.16	chr3	-	9141	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	25933	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	54.7142841729834	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTATTCTGTTGCAGA	NA	False	NA	-8	True	AATAAA	-21	NA	133224114	133169442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133223979
ES.22645.2	chr3	-	9365	14	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	1	5547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.1348999235616	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCTCTCAAACTGAGA	NA	False	NA	NA	False	AAAACA	-28	NA	133250062	133163892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133163908_133169437_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133223089_133223327_133249960
ES.22645.20	chr3	-	9215	11	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	65.095007489054	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250063	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175529_133177100_133177239_133179356_133179447_133182245_133182397_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.21	chr3	-	9183	13	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	67.7962634171923	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250051	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133240422_133240507_133249960
ES.22645.22	chr3	-	9041	10	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	59.8531123812989	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250168	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.25	chr3	-	6009	13	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.0664116407251	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250075	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173174_133173798_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133191620_133193957_133194479_133219789_133219935_133249960
ES.22645.27	chr3	-	8893	10	NNC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-25980	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.6002174078123	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133212423	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185889_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
ES.22645.28	chr3	-	10091	11	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	96	junction_5	36.8387024744358	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250054	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.29	chr3	-	12589	10	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	102	junction_9	33.5375227483898	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250068	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.3	chr3	-	9139	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	56.068729960102	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGCAGAGGTTTTTG	NA	False	NA	0	True	AATAAA	-29	NA	133250068	133169434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249946
ES.22645.30	chr3	-	9104	11	NNC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.0604065881063	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133250068	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182405_133185889_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.31	chr3	-	5979	5	NNC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-25998	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	87.7638877899105	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	False	NA	-9	True	AATAAA	-20	NA	133212441	133169443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177155_133193493_133194479_133212373
ES.22645.32	chr3	-	8978	11	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	31537	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	56.588338021186	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAAGTATTCTGTTGCA	NA	False	NA	-10	True	AATAAA	-19	NA	133218510	133169444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133218391
ES.22645.34	chr3	-	12417	6	NIC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-5315	-2	intron_retention	FALSE	canonical	3	149	junction_5	23.8243572840906	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCAAGTATTCTGTTGC	NA	False	NA	-11	True	AATAAA	-18	NA	133191758	133169445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133189079_133191272
ES.22645.37	chr3	-	9093	11	NNC	ENSMUSG00000040943.13	novel	9179	11	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	70.7834020092281	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCAAGTATTCTGTTGC	NA	False	NA	-11	True	AATAAA	-18	NA	133250080	133169445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185889_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219919_133249957
ES.22645.38	chr3	-	4192	3	NNC	ENSMUSG00000040943.13	novel	3186	3	NA	NA	2331	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCACTCAAGTATTCTG	NA	False	NA	-15	True	AATAAA	-14	NA	133175247	133169449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173278_133173798_133173952_133175036
ES.22645.39	chr3	-	5997	10	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-5904	-576	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	31.2516666222246	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTTTCAGAATGTCT	NA	False	NA	-45	True	NA	NA	NA	133192347	133170175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272
ES.22645.4	chr3	-	8973	11	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-26034	5	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_10	41.8946297274484	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGCAGAGGTTTTTG	NA	False	NA	0	True	AATAAA	-29	NA	133212477	133169434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
ES.22645.40	chr3	-	2777	1	ISM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	76747	1188	4174	980	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTCAGGGATATTTCA	NA	False	NA	NA	False	NA	NA	NA	133173404	133170627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_133170600_133173400
ES.22645.41	chr3	-	5002	10	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-5771	570	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	31.2516666222246	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTGTATAGTAAATTAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	133192214	133171037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272
ES.22645.42	chr3	-	6932	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-14	-26	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	35.1295124450667	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	133250077	133171633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.44	chr3	-	7738	4	NIC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-7	31	intron_retention	FALSE	canonical	3	102	junction_3	19.9387952383176	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGATCTGCTCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	133250054	133184785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.45	chr3	-	7541	5	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-7	31	intron_retention	TRUE	non_canonical	0	0	junction_1	55.4408468550039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGATCTGCTCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	133250054	133184785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133187311_133187507_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.46	chr3	-	4726	5	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-25991	0	intron_retention	FALSE	canonical	3	63	junction_4	46.3519147393072	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	133212434	133184816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133212373
ES.22645.47	chr3	-	3907	4	NIC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-7052	0	intron_retention	FALSE	canonical	3	149	junction_3	18.263503375737	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	133193495	133184816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133185127_133185893_133187189_133188999_133189079_133191272
ES.22645.48	chr3	-	3893	8	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.7015098960318	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	133250069	133184816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133191620_133191878_133194479_133219789_133219935_133249960
ES.22645.49	chr3	-	5984	6	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	62.6226795977304	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTCC	NA	False	NA	NA	False	NA	NA	NA	133250051	133184816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133187205_133188999_133189079_133191272_133194479_133214637_133214713_133219789_133219935_133249960
ES.22645.5	chr3	-	9812	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	139	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	35.1295124450667	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	133250761	133169437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.50	chr3	-	5038	6	ISM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	-39	15379	-39	-2	5prime_fragment	FALSE	canonical	3	102	junction_5	30.970954134479	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	133250190	133184818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.51	chr3	-	2718	3	NNC	ENSMUSG00000040943.13	novel	423	3	NA	NA	-5	2268	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	52	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAGGAAGTAAGACCTCAA	NA	False	NA	NA	False	NA	NA	NA	133250068	133192027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133194479_133219789_133219935_133249946
ES.22645.52	chr3	-	1741	1	Intergenic	novelGene_18615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCTAAGATTCAACAT	NA	False	NA	NA	False	NA	NA	NA	133204249	133202508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133202500_133204200
ES.22645.53	chr3	-	3561	1	Genic_Genomic	ENSMUSG00000040943.13	novel	NA	NA	NA	NA	107	-2710	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACATTGTTTCATCTCAT	NA	False	NA	NA	False	NA	NA	NA	133250793	133247232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_133247200_133250800
ES.22645.6	chr3	-	11822	11	NIC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	102	junction_10	31.8378705318054	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	133250062	133169437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.7	chr3	-	9092	11	FSM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	89	-2	1	2	multi-exon	FALSE	canonical	1	1	junction_5	56.8116185300155	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	133250062	133169437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ES.22645.8	chr3	-	9160	12	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.0169027278112	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTGCAGAGGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	133250051	133169437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185889_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133214637_133214713_133219789_133219935_133249960
ES.22646.1	chr3	-	2506	1	Intergenic	novelGene_18616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATACATTCATAGTTTCA	NA	False	NA	NA	False	TTTAAA	-40	NA	133257892	133255386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133255400_133257900
ES.22647.1	chr3	-	176	1	Intergenic	novelGene_18617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	133298965	133298789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133298800_133299000
ES.22648.1	chr3	-	163	1	Intergenic	novelGene_18618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAATAATAAATCAAAT	NA	False	NA	NA	False	NA	NA	NA	133314316	133314153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133314200_133314300
ES.22649.1	chr3	+	4132	1	Intergenic	novelGene_18619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	133715450	133719582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_133715400_133719600
ES.2265.1	chr10	+	2474	5	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.5927260985754	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382413	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4382712_4384827_4384934_4389491_4389731_4400646_4400810_4403471
ES.2265.11	chr10	+	1795	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.9747217637955	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382605	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471_4403614_4404106
ES.2265.12	chr10	+	705	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	145	1579	-8	-396	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCATTCATTTTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	4382611	4403562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ES.2265.13	chr10	+	2116	4	NIC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	90.5428075553216	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTCACTGGTTTTTA	NA	False	NA	5	True	AATAAA	-14	NA	4382612	4405137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_4382712_4384827_4384934_4389491_4389737_4403471
ES.2265.14	chr10	+	2767	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.6985414111582	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382613	4405140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4383083_4384827_4384934_4389491_4389737_4398308_4398424_4400646_4400810_4403471
ES.2265.15	chr10	+	2325	5	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.2247194509354	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382620	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4382764_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ES.2265.16	chr10	+	1480	8	Fusion	ENSMUSG00000019767.13_ENSMUSG00000061759.16	novel	2429	5	NA	NA	0	6792	multi-exon	FALSE	canonical	0	0	junction_3	83.7315925552401	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	4382626	4471104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4462751_4462881_4464055_4464313_4468905_4469051_4470754
ES.2265.17	chr10	+	2020	4	FSM	ENSMUSG00000061759.16	ENSMUST00000152294.2	828	4	-12	-1180	1	-2	multi-exon	FALSE	canonical	0	0	junction_2	86.821656284593	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCACTGGTTTTTAT	NA	False	NA	6	True	AATAAA	-15	NA	4382627	4405138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4382712_4384827_4384934_4400646_4400810_4403471
ES.2265.18	chr10	+	651	3	FSM	ENSMUSG00000061759.16	ENSMUST00000117489.8	680	3	22	7	2	-7	multi-exon	FALSE	canonical	3	189	junction_2	3	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTCAGCAAATAGA	NA	False	NA	NA	False	AATAAA	-16	NA	4382641	4389966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4382712_4384827_4384934_4389491
ES.2265.2	chr10	+	2350	4	NIC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	76.916982664573	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382437	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_4382712_4389491_4389737_4400646_4400810_4403471
ES.2265.20	chr10	+	2183	4	ISM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	2360	2	246	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	85.1704173994703	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4384826	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4384934_4389491_4389737_4400646_4400810_4403471
ES.2265.21	chr10	+	3299	1	Genic_Genomic	ENSMUSG00000061759.16	novel	NA	NA	NA	NA	19023	1761	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4403603	4406902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_4403600_4406900
ES.2265.22	chr10	+	3858	7	ISM	ENSMUSG00000019767.13	ENSMUST00000138112.8	3350	11	-22	17876	-22	2654	5prime_fragment	FALSE	canonical	2	2	junction_5	4.14996653266291	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAAAGATTTATTT	3185	False	NA	NA	False	AATAAA	-17	NA	4432479	4494355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4432629_4462751_4462881_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681
ES.2265.23	chr10	+	3707	6	NIC	ENSMUSG00000019767.13	novel	3350	11	NA	NA	4	2658	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.03587132480567	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGATTTATTTTATT	3211	False	NA	NA	False	AATAAA	-21	NA	4432505	4494359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_4432629_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681
ES.2265.24	chr10	+	3205	3	FSM	ENSMUSG00000019767.13	ENSMUST00000157064.2	548	3	-3	-2654	-3	2654	multi-exon	FALSE	canonical	0	0	junction_1	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAAAGATTTATTT	480	False	NA	NA	False	AATAAA	-17	NA	4482991	4494355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4483205_4483958_4484277_4491681
ES.2265.25	chr10	+	3864	2	ISM	ENSMUSG00000019767.13	ENSMUST00000019901.7	2151	11	23158	16813	35	2597	internal_fragment	FALSE	canonical	3	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGTCTCCAAACAAAACAA	518	False	NA	NA	False	NA	NA	NA	4483029	4494298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_4484277_4491681
ES.2265.3	chr10	+	2455	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	-24	-2	-24	2	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTTTTTATTTGCT	NA	False	NA	11	True	AATAAA	-20	NA	4382442	4405143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ES.2265.4	chr10	+	2387	5	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.0234346396753	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGAGCTCTCACTGGTT	NA	False	NA	1	True	AATAAA	-43	NA	4382460	4405133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400770_4403471
ES.2265.5	chr10	+	4418	10	Fusion	ENSMUSG00000019767.13_ENSMUSG00000061759.16	novel	2429	5	NA	NA	2	2606	multi-exon	FALSE	canonical	0	0	junction_3	77.4754441384136	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	4382468	4494307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4462751_4462881_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681
ES.2265.6	chr10	+	5710	12	Fusion	ENSMUSG00000019767.13_ENSMUSG00000061759.16	novel	2429	5	NA	NA	-26	2266	multi-exon	FALSE	canonical	0	0	junction_3	72.4180928034511	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAGATGTCTTAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	4382593	4514497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4462751_4462881_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681_4491883_4499556_4499800_4510898
ES.2265.7	chr10	+	2415	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.8990329867172	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCACTGGTTTTTATT	NA	False	NA	7	True	AATAAA	-16	NA	4382593	4405139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4398308_4398424_4400646_4400810_4403471
ES.2265.8	chr10	+	4963	4	FSM	ENSMUSG00000061759.16	ENSMUST00000118544.8	5044	4	81	0	-26	0	multi-exon	FALSE	canonical	0	0	junction_3	90.5428075553216	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382593	4405140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646
ES.2265.9	chr10	+	4602	13	Fusion	ENSMUSG00000019767.13_ENSMUSG00000061759.16	novel	2429	5	NA	NA	-18	929	multi-exon	FALSE	canonical	0	0	junction_3	70.1147373159801	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTGTCTCTGATTGT	NA	False	NA	NA	False	TATAAA	-3	NA	4382601	4513160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4462751_4462881_4464055_4464313_4468905_4469051_4470754_4470941_4483958_4484277_4491681_4491883_4499556_4499800_4508496_4508734_4510898
ES.22650.1	chr3	-	209	1	Intergenic	novelGene_18620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGTAGTCTATATT	NA	False	NA	NA	False	NA	NA	NA	133897233	133897024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_133897000_133897200
ES.22651.1	chr3	+	177	1	Intergenic	novelGene_18621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAAGGCATTCCTC	1484	False	NA	NA	False	NA	NA	NA	134260831	134261008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_134260800_134261000
ES.22652.1	chr3	+	1958	1	ISM	ENSMUSG00000028172.6	ENSMUST00000029822.6	3762	5	103608	7	103608	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGGTATGTGTCATG	NA	False	NA	NA	False	NA	NA	NA	134638375	134640333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134638400_134640300
ES.22653.1	chr3	+	143	1	Intergenic	novelGene_18622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134770094	134770237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_134770100_134770200
ES.22654.1	chr3	+	7823	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	7	-81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	54.1082134747775	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCAGATGGGTATAAC	NA	False	NA	20	True	AATAAA	-22	NA	134918304	134979291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953378_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.11	chr3	+	7762	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	55	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	53.9952901466849	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAATTTTAATCTTTC	NA	False	NA	6	True	AATAAA	-8	NA	134918352	134979277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947829_134948115_134948237_134948394_134949352_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.16	chr3	+	7676	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	56	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.3235020216925	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGTATACATTTCTTT	NA	False	NA	36	True	AATAAA	-38	NA	134918353	134979307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.17	chr3	+	5377	24	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	56	32860	56	-5894	intron_retention	FALSE	canonical	3	113	junction_21	33.151368486296	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGAGTGGGAACCATC	NA	False	NA	NA	False	ATTAAA	-12	NA	134918353	134946512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075
ES.22654.18	chr3	+	6424	38	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	56	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	55.9760462178476	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGTATACATTTCTT	NA	False	NA	35	True	AATAAA	-37	NA	134918353	134979306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.2	chr3	+	4377	28	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	8	30544	8	-3578	5prime_fragment	FALSE	canonical	3	113	junction_21	32.2815545696315	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGTATACACATCTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	134918305	134948828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237
ES.22654.20	chr3	+	7796	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	56	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.8152821009277	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918353	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920861_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937128_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941198_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.21	chr3	+	7767	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	56	87	56	-87	multi-exon	FALSE	canonical	0	0	junction_28	46.2867818371455	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918353	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.22	chr3	+	9258	2	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	56	-23205	intron_retention	FALSE	canonical	3	189	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAGGCTTCAGTGAT	NA	False	NA	NA	False	AATAAA	-39	NA	134918353	134929201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_134924451_134926040
ES.22654.23	chr3	+	10726	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	57	-87	intron_retention	FALSE	non_canonical	0	0	junction_20	54.3443451634084	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918354	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941198_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134974882_134976434_134976722_134978911
ES.22654.24	chr3	+	7765	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	58	-89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	54.2336326791802	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATCTTTCCAGATG	NA	False	NA	12	True	AATAAA	-14	NA	134918355	134979283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935816_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.25	chr3	+	7772	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	58	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	53.105411130675	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTCCAGATGGGTAT	NA	False	NA	17	True	AATAAA	-19	NA	134918355	134979288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978917
ES.22654.26	chr3	+	7565	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	58	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	54.6124730326672	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGATGGGTATAACATG	NA	False	NA	23	True	AATAAA	-25	NA	134918355	134979294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.28	chr3	+	7675	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	68	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	54.4178241643017	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAATTTTAATCTTTC	NA	False	NA	6	True	AATAAA	-8	NA	134918365	134979277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.29	chr3	+	7605	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	68	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	61.4386074007121	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATTTTAATCTTTCCA	NA	False	NA	8	True	AATAAA	-10	NA	134918365	134979279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943583_134943687_134943961_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949352_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.3	chr3	+	7828	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	21	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	46.2867818371455	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAACATGTATACATTTC	NA	False	NA	33	True	AATAAA	-35	NA	134918318	134979304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949353_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.31	chr3	+	11519	44	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	70	-74	intron_retention	FALSE	non_canonical	0	0	junction_28	45.6001266685782	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTATAACATGTATA	NA	False	NA	27	True	AATAAA	-29	NA	134918367	134979298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700
ES.22654.35	chr3	+	7708	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	75	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	60.5520855274894	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATGGGTATAACATGT	NA	False	NA	24	True	AATAAA	-26	NA	134918372	134979295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947829_134948115_134948237_134948402_134949358_134949640_134952301_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.37	chr3	+	7720	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	76	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	53.7808539065119	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTAATCTTTCCAGA	NA	False	NA	10	True	AATAAA	-12	NA	134918373	134979281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939521_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.39	chr3	+	10255	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	78	-83	intron_retention	FALSE	non_canonical	0	0	junction_28	46.6361587360376	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTCCAGATGGGTATA	NA	False	NA	18	True	AATAAA	-20	NA	134918375	134979289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.4	chr3	+	7829	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	26	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	46.2867818371455	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGTATACATTTCTTT	NA	False	NA	36	True	AATAAA	-38	NA	134918323	134979307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.40	chr3	+	7701	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	78	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	54.0538643106446	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918375	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952301_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.41	chr3	+	7649	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	80	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	54.3343376412521	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTATACATTTCTTTA	NA	False	NA	37	True	AATAAA	-39	NA	134918377	134979308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965866_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.43	chr3	+	7307	44	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	97	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	55.3316956063119	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918394	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.44	chr3	+	7642	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	100	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	54.3417171445863	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGGTATAACATGTATAC	NA	False	NA	28	True	AATAAA	-30	NA	134918397	134979299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945622_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.45	chr3	+	2059	1	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	101	-31949	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTTTGTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	134918398	134920457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_134918400_134920500
ES.22654.46	chr3	+	12753	43	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	107	-87	intron_retention	FALSE	non_canonical	0	0	junction_27	46.080133298497	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134918404	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949352_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700
ES.22654.47	chr3	+	7742	44	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	107	-71	intron_retention	FALSE	non_canonical	0	0	junction_26	55.0462021390186	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTATAACATGTATACAT	NA	False	NA	30	True	AATAAA	-32	NA	134918404	134979301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134924234_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.48	chr3	+	7700	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	111	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	53.9952901466849	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATTTTAATCTTTCCA	NA	False	NA	8	True	AATAAA	-10	NA	134918408	134979279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947829_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.49	chr3	+	3269	24	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	4095	31337	4095	-4371	internal_fragment	FALSE	canonical	3	113	junction_18	29.6332337827555	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTAAAGGAATTGCAGG	NA	False	NA	NA	False	AAGAAA	-5	NA	134922392	134948035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823
ES.22654.5	chr3	+	7669	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	27	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	54.6817048287195	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAACATGTATACATTTC	NA	False	NA	33	True	AATAAA	-35	NA	134918324	134979304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.50	chr3	+	3994	23	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	4757	30538	4757	-3572	intron_retention	FALSE	canonical	3	113	junction_17	29.2033338977556	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACACATCTAAACAATTC	NA	False	NA	NA	False	AATAAA	-22	NA	134923054	134948834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823
ES.22654.52	chr3	+	6866	36	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	10632	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.6112338608724	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134928929	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937128_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.53	chr3	+	6127	32	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-12103	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.8464563284046	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTCCAGATGGGTATA	NA	False	NA	18	True	AATAAA	-20	NA	134935867	134979289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134978911
ES.22654.55	chr3	+	5866	28	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-7378	-80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.4804924997154	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAGATGGGTATAACA	NA	False	NA	21	True	AATAAA	-23	NA	134940592	134979292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949352_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.56	chr3	+	6713	24	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-4709	-87	intron_retention	FALSE	non_canonical	0	0	junction_6	55.5265906429613	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134943261	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134943579_134943687_134943961_134944075_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.57	chr3	+	5441	25	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-4709	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.5420327209514	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGGTATAACATGTATAC	NA	False	NA	28	True	AATAAA	-30	NA	134943261	134979299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.58	chr3	+	5125	24	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-4285	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	55.0761974325524	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTATAACATGTATA	NA	False	NA	27	True	AATAAA	-29	NA	134943685	134979298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.59	chr3	+	5728	21	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	-2505	-91	intron_retention	FALSE	non_canonical	0	0	junction_3	57.9293535265154	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTAATCTTTCCAGA	NA	False	NA	10	True	AATAAA	-12	NA	134945465	134979281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.6	chr3	+	7799	46	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	32	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	53.9952901466849	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTCCAGATGGGTATA	NA	False	NA	18	True	AATAAA	-20	NA	134918329	134979289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947829_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.60	chr3	+	2346	4	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	81	328	intron_retention	FALSE	non_canonical	0	0	junction_2	80.5081086323331	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAGAAAGTCAAGAG	NA	False	NA	NA	False	AATACA	-2	NA	134948051	134952734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134948115_134948237_134949662_134951704_134952407_134952577
ES.22654.61	chr3	+	2874	14	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	35525	83	5852	-83	3prime_fragment	FALSE	canonical	3	195	junction_1	26.7322910468853	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTCCAGATGGGTATA	NA	False	NA	18	True	AATAAA	-20	NA	134953822	134979289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22654.62	chr3	+	6142	8	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	42512	87	-4193	-87	intron_retention	FALSE	canonical	3	204	junction_3	30.5146334918651	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCTTTCCAGATGGG	NA	False	NA	14	True	AATAAA	-16	NA	134960809	134979285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700
ES.22654.63	chr3	+	3646	6	NIC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	124	-92	intron_retention	FALSE	canonical	3	206	junction_1	31.7326330454943	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTTAATCTTTCCAG	NA	False	NA	9	True	AATAAA	-11	NA	134965126	134979280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134976722_134978911
ES.22654.7	chr3	+	9095	45	NNC	ENSMUSG00000045328.12	novel	7910	46	NA	NA	35	-74	intron_retention	FALSE	non_canonical	0	0	junction_1	54.675880997108	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTATAACATGTATA	NA	False	NA	27	True	AATAAA	-29	NA	134918332	134979298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134918476_134920866_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134945710_134946708_134946868_134947823_134948115_134948237_134948402_134949358_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ES.22655.1	chr3	-	3382	3	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGGAACTAGTCACCT	NA	False	NA	NA	False	NA	NA	NA	134926680	134921625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134924302_134924383_134924448_134926038
ES.22655.2	chr3	-	5055	1	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGGAACTAGTCACCT	NA	False	NA	NA	False	NA	NA	NA	134926680	134921625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134921600_134926700
ES.22655.3	chr3	-	4849	3	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGGAACTAGTCACCT	NA	False	NA	NA	False	NA	NA	NA	134926680	134921625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134922181_134922304_134924302_134924383
ES.22655.4	chr3	-	3258	4	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGGAACTAGTCACCT	NA	False	NA	NA	False	NA	NA	NA	134926680	134921625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134922181_134922304_134924302_134924383_134924448_134926038
ES.22655.5	chr3	-	3464	2	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGGAACTAGTCACCT	NA	False	NA	NA	False	NA	NA	NA	134926680	134921625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134924448_134926038
ES.22655.6	chr3	-	4908	2	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134926680	134921648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134922181_134922304
ES.22655.7	chr3	-	2853	3	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134926680	134921648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134922424_134923011_134924448_134926038
ES.22655.8	chr3	-	2218	6	Antisense	novelGene_ENSMUSG00000045328.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134926680	134921648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_134922181_134922304_134923134_134923793_134923876_134924232_134924302_134924383_134924448_134926038
ES.22656.1	chr3	+	1224	11	NNC	ENSMUSG00000028167.16	novel	1059	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.01103238425	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	False	NA	18	True	AATAAA	-28	NA	134986992	135010184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_134998027_134998167_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ES.22656.2	chr3	+	1034	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	22	3	0	0	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	False	NA	18	True	AATAAA	-28	NA	134987043	135010184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ES.22656.3	chr3	+	1107	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	62	3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	False	NA	18	True	AATAAA	-28	NA	134987043	135010184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ES.22656.4	chr3	+	3509	9	ISM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	44	19	22	-16	intron_retention	FALSE	canonical	3	27	junction_1	16.0385278314439	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGATTTTGTGGCAAAG	NA	False	NA	2	True	AATAAA	-12	NA	134987065	135010168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322
ES.22656.5	chr3	+	1061	9	ISM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	95	2529	33	-2526	5prime_fragment	FALSE	canonical	3	49	junction_1	11.0049704679295	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACCTTCCAAGAGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	134987076	135007658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322
ES.22657.1	chr3	+	2782	13	NNC	ENSMUSG00000037994.15	novel	4818	13	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.59861050777091	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTGATACATTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	135013448	135048297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135013543_135022814_135022955_135024040_135024222_135027646_135027818_135029389_135029533_135030269_135030398_135031854_135032031_135034752_135034860_135035528_135035679_135036343_135036449_135037414_135038314_135042114_135042336_135048030
ES.22657.2	chr3	+	3496	12	NNC	ENSMUSG00000037994.15	novel	1242	4	NA	NA	9093	-2	intron_retention	FALSE	canonical	0	0	junction_1	1.66639116180212	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAATCTTGATACATTT	NA	False	NA	NA	False	AATAAA	-15	NA	135022598	135048294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135022711_135022814_135022955_135024040_135024222_135027646_135027818_135029389_135029533_135030269_135032031_135034752_135034860_135035528_135035679_135036343_135036453_135038176_135038314_135042114_135042336_135048030
ES.22658.1	chr3	-	1804	1	Antisense	novelGene_ENSMUSG00000037994.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCCACCAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	135037562	135035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_135035800_135037600
ES.22659.1	chr3	+	1469	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160941.8	1407	4	-50	-12	-33	12	multi-exon	FALSE	canonical	1	1	junction_1	61.0136596727869	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGTTTTTTCTTTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	135053756	135064079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135053859_135054090_135054535_135060771_135060833_135063217
ES.22659.10	chr3	+	1471	4	NIC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	-10	12	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGTTTTTTCTTTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	135053779	135064079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
ES.22659.11	chr3	+	1778	11	NNC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	-10	1034	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	43.465963695747	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053779	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053859_135054090_135054535_135060771_135060833_135063217_135063379_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720
ES.22659.12	chr3	+	1392	7	NIC	ENSMUSG00000050150.17	novel	1545	6	NA	NA	-6	48	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	43.9873719252343	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTGTATAGCCAGGT	NA	False	NA	2	True	ATTAAA	-14	NA	135053783	135080234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053859_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
ES.22659.13	chr3	+	3794	4	NIC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	-5	2340	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGCCAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135053784	135066407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
ES.22659.14	chr3	+	3309	4	NNC	ENSMUSG00000050150.17	novel	1196	4	NA	NA	-5	2340	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	66.594961437701	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGCCAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135053784	135066407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135060771_135060833_135063217_135064329_135064369
ES.22659.15	chr3	+	4310	12	NNC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	39.4484704162508	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTATGTCTCATGATT	NA	False	NA	4	True	ATTAAA	-16	NA	135053786	135103585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135081012_135087040_135088623_135096182_135096290_135097921_135098011_135099720_135099830_135103356
ES.22659.16	chr3	+	1594	10	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	22.3247634193152	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGCTATGTCTCATGA	NA	False	NA	2	True	ATTAAA	-14	NA	135053798	135103583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
ES.22659.17	chr3	+	730	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	20	13928	3	-16	5prime_fragment	FALSE	canonical	3	17	junction_1	66	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGAAGGTTCTTGACAT	NA	False	NA	-2	True	AATAAA	-9	NA	135053809	135063812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135053884_135060771_135060833_135063217
ES.22659.18	chr3	+	1207	9	NNC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	3	1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.248389121754	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053809	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053880_135063217_135063383_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
ES.22659.19	chr3	+	12530	2	NNC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	4	2314	intron_retention	FALSE	canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135053810	135066381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135064329_135064369
ES.22659.2	chr3	+	1691	11	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	-27	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	38.1727651605173	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGCTATGTCTCATGA	NA	False	NA	2	True	ATTAAA	-14	NA	135053762	135103583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
ES.22659.20	chr3	+	4553	12	NNC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	-5	intron_retention	FALSE	canonical	0	0	junction_11	40.1289244624423	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCACCTGCTATGTCTCA	NA	False	NA	-1	True	ATTAAA	-11	NA	135053810	135103580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063383_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720_135099830_135100693
ES.22659.21	chr3	+	1271	10	NNC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	4	1034	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	40.1607879515441	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053810	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135060771_135060833_135063217_135063383_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
ES.22659.22	chr3	+	984	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	21	13673	4	0	5prime_fragment	FALSE	canonical	3	17	junction_1	66	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGTATTCATTG	NA	False	NA	NA	False	NA	NA	NA	135053810	135064067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135053884_135060771_135060833_135063217
ES.22659.23	chr3	+	1465	10	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	1034	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	38.174388673786	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053810	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720
ES.22659.24	chr3	+	2149	13	NNC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	4	1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.3822640411186	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053810	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135082466_135082579_135084119_135084245_135088446_135088623_135096182_135096290_135097860_135098011_135099720
ES.22659.27	chr3	+	1849	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	6	1034	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGCTTTATTTTTGTT	NA	False	NA	5	True	AATACA	-15	NA	135053812	135099878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
ES.22659.28	chr3	+	2499	8	NNC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	4	5624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.0670019499991	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135053822	135086086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135084893
ES.22659.29	chr3	+	2082	13	NNC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	42.6350794534266	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTATGTCTCATGATT	NA	False	NA	4	True	ATTAAA	-16	NA	135053824	135103585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063383_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604_135100742_135103356
ES.22659.3	chr3	+	1435	7	NNC	ENSMUSG00000050150.17	novel	1545	6	NA	NA	-22	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.2178948189782	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTGTATAGCCAGGT	NA	False	NA	2	True	ATTAAA	-14	NA	135053767	135080234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135053884_135054090_135054535_135060769_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
ES.22659.30	chr3	+	3603	3	NNC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	6260	2312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135060350	135066379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135060833_135063217_135064329_135064369
ES.22659.31	chr3	+	4033	1	NIC	ENSMUSG00000050150.17	novel	588	4	NA	NA	8284	2340	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGCCAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135062374	135066407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135062400_135066400
ES.22659.32	chr3	+	3578	1	Intergenic	novelGene_18623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTTTTGGTCATGGTC	NA	False	NA	NA	False	NA	NA	NA	135081494	135085072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135081500_135085100
ES.22659.33	chr3	+	3721	5	NIC	ENSMUSG00000050150.17	novel	783	6	NA	NA	-3074	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	14.2543852901484	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTATGTCTCATGATTT	NA	False	NA	5	True	ATTAAA	-17	NA	135085436	135103586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135088623_135096182_135096290_135097921_135098011_135099720_135099830_135103356
ES.22659.34	chr3	+	3482	4	ISM	ENSMUSG00000050150.17	ENSMUST00000078568.12	2248	13	31759	3712	-2957	1032	internal_fragment	FALSE	canonical	3	12	junction_2	17.1723291631883	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGACTGCTTTATTTTTG	NA	False	NA	3	True	AATACA	-13	NA	135085553	135099876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135088623_135096182_135096290_135097860_135098011_135099720
ES.22659.5	chr3	+	1227	4	NIC	ENSMUSG00000050150.17	novel	1196	4	NA	NA	-21	-4	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACATTGGTCTTCAAAT	NA	False	NA	10	True	AATAAA	-21	NA	135053768	135063824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
ES.22659.7	chr3	+	3364	3	ISM	ENSMUSG00000050150.17	ENSMUST00000159658.8	588	4	-19	11333	-19	2340	5prime_fragment	FALSE	canonical	3	17	junction_1	66	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGCCAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	135053770	135066407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135053884_135060771_135060833_135063217
ES.22659.9	chr3	+	917	5	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	-11	48	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	24.1350367722943	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTGTATAGCCAGGT	NA	False	NA	2	True	ATTAAA	-14	NA	135053778	135080234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135053884_135063217_135063516_135077605_135077777_135078879_135079023_135080034
ES.2266.1	chr10	-	2014	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	42.5959700754269	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5760	False	NA	-3	True	NA	NA	NA	4382290	4353168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367218_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382063
ES.2266.10	chr10	-	5871	10	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	0	-4	intron_retention	FALSE	canonical	3	109	junction_2	17.8332467979901	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGATCCTTTCAGCTCT	5706	False	NA	-9	True	NA	NA	NA	4382344	4353174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4353991_4357804_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.11	chr10	-	1945	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	12	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.4970236944797	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5728	False	NA	-28	True	NA	NA	NA	4382322	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364391_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.12	chr10	-	2013	14	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.1643705135352	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5706	False	NA	-28	True	NA	NA	NA	4382344	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360731_4360790_4361666_4361732_4363308_4363416_4364391_4364644_4367152_4367193_4368258_4368324_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.13	chr10	-	1093	7	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	256	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.7217944589005	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	NA	False	NA	-28	True	NA	NA	NA	4363489	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361320_4361545_4361666_4361732_4363308
ES.2266.14	chr10	-	2683	12	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-9	-23	intron_retention	FALSE	canonical	3	6	junction_3	38.5651750582404	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5697	False	NA	-28	True	NA	NA	NA	4382353	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360731_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.15	chr10	-	8020	9	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	1	-23	intron_retention	FALSE	canonical	1	2	junction_4	44.787693622244	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5717	False	NA	-28	True	NA	NA	NA	4382333	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4357926_4360712_4361732_4363308_4364644_4367152_4367218_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.16	chr10	-	5899	14	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	1	-23	intron_retention	FALSE	canonical	0	0	junction_3	57.7721498801555	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5756	False	NA	-28	True	NA	NA	NA	4382294	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4357926_4360712_4360790_4361320_4361545_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4369806_4369902_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.17	chr10	-	1840	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	1	-23	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_12	33.7279763533019	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACACAAATGACA	5717	False	NA	-28	True	NA	NA	NA	4382333	4353193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382230
ES.2266.18	chr10	-	1692	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-16	-25	combination_of_known_splicesites	FALSE	canonical	3	5	junction_11	34.497095338258	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAATAAAACACAAATGA	5733	False	NA	-30	True	NA	NA	NA	4382317	4353195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4382265
ES.2266.19	chr10	-	2074	2	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATCCCAGCACCCATAT	NA	False	NA	NA	False	AAAACA	-3	NA	4356453	4354221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4354837_4354994
ES.2266.2	chr10	-	2047	13	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	29.0128084741129	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5702	False	NA	-3	True	NA	NA	NA	4382348	4353168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382063
ES.2266.20	chr10	-	3959	9	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	0	-5068	intron_retention	FALSE	canonical	0	0	junction_2	45.3762052181537	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATACAAAAAAAAAAACA	5706	False	NA	NA	False	NA	NA	NA	4382344	4359051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4361732_4363308_4363416_4364391_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.21	chr10	-	1487	1	Antisense	novelGene_ENSMUSG00000085687.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	4374771	4373284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4373300_4374800
ES.2266.22	chr10	-	4508	4	NNC	ENSMUSG00000019763.12	novel	468	4	NA	NA	-1600	2590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.8961278473561	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGTCTGAAATCCTTA	4062	False	NA	NA	False	AATACA	-13	NA	4383988	4373503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4377692_4379076_4379172_4383464_4383536_4383834
ES.2266.23	chr10	-	3915	1	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	3872	1585	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAAGAGGGAGGGGGTG	9627	False	NA	NA	False	NA	NA	NA	4378423	4374508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4374500_4378400
ES.2266.24	chr10	-	3348	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	-9	-1567	-9	1567	multi-exon	FALSE	canonical	3	145	junction_2	8	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	5697	False	NA	NA	False	NA	NA	NA	4382353	4374526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4377692_4379076_4379172_4382265
ES.2266.25	chr10	-	3736	1	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	3439	973	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTAAAACTTGTGATG	9194	False	NA	NA	False	NA	NA	NA	4378856	4375120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4375100_4378900
ES.2266.26	chr10	-	4042	2	NIC	ENSMUSG00000019763.12	novel	776	3	NA	NA	35	767	intron_retention	FALSE	canonical	3	35	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTTTCCAATGTCTGT	5790	False	NA	NA	False	AATAGA	-15	NA	4382260	4375326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4379172_4382063
ES.2266.28	chr10	-	2490	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	49	-767	0	767	multi-exon	FALSE	canonical	3	145	junction_2	8	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTTTCCAATGTCTGT	5755	False	NA	NA	False	AATAGA	-15	NA	4382295	4375326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4377692_4379076_4379172_4382265
ES.2266.3	chr10	-	1855	13	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	38.0292285252044	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5717	False	NA	-3	True	NA	NA	NA	4382333	4353168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367218_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.30	chr10	-	1801	4	NNC	ENSMUSG00000019763.12	novel	468	4	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.8961278473561	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTGAGTTCAAGTCCA	5741	False	NA	NA	False	NA	NA	NA	4382309	4376092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4377692_4379076_4379172_4381583_4381647_4382265
ES.2266.31	chr10	-	1723	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	49	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	8	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTGAGTTCAAGTCC	5755	False	NA	NA	False	NA	NA	NA	4382295	4376093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4377692_4379076_4379172_4382265
ES.2266.4	chr10	-	1881	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	4	1254	4	2	multi-exon	FALSE	canonical	3	107	junction_3	17.5220099684178	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	5666	False	NA	-3	True	NA	NA	NA	4382384	4353168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.5	chr10	-	4743	8	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	-8378	2	intron_retention	FALSE	canonical	3	109	junction_3	12.8142140466223	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAGCTCTTAATTA	NA	False	NA	-3	True	NA	NA	NA	4372123	4353168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4353502_4353873_4353991_4357804_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081
ES.2266.6	chr10	-	3276	11	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_4	42.1421404297409	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTCAGCTCTTAAT	5763	False	NA	-5	True	NA	NA	NA	4382287	4353170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353991_4357804_4357926_4360712_4360790_4361666_4361727_4363308_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.2266.7	chr10	-	5492	2	ISM	ENSMUSG00000019763.12	ENSMUST00000140660.2	749	3	-929	0	-929	0	intron_retention	FALSE	canonical	3	114	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTTCAGCTCTTAAT	NA	False	NA	-5	True	NA	NA	NA	4359034	4353170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_4353502_4353873
ES.2266.8	chr10	-	3146	12	NIC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	10	-2	intron_retention	FALSE	canonical	3	35	junction_11	30.2548404705896	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATCCTTTCAGCTCTTA	5726	False	NA	-7	True	NA	NA	NA	4382324	4353172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382063
ES.2266.9	chr10	-	3052	11	NNC	ENSMUSG00000019763.12	novel	3139	13	NA	NA	3	-4	intron_retention	FALSE	canonical	3	6	junction_2	40.4420573166104	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGATCCTTTCAGCTCT	5719	False	NA	-9	True	NA	NA	NA	4382331	4353174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4353991_4357804_4357926_4360731_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ES.22660.1	chr3	-	3500	1	Antisense	novelGene_ENSMUSG00000050150.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTATTTTCAACCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	135103368	135099868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_135099900_135103400
ES.22661.1	chr3	+	5693	2	Antisense	novelGene_ENSMUSG00000028165.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCATGGTGACATGTA	NA	False	NA	NA	False	NA	NA	NA	135113439	135119171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_135116684_135116722
ES.22662.1	chr3	+	1238	1	Antisense	novelGene_ENSMUSG00000028165.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGTCTCGTTTAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	135128979	135130217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_135129000_135130200
ES.22662.10	chr3	+	1962	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	20	-470	20	8	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGAGGCTGTGTTGAAG	NA	False	NA	13	True	AATAAA	-23	NA	135144014	135172289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.101	chr3	+	4667	6	NIC	ENSMUSG00000078578.10	novel	2515	7	NA	NA	-107	1	intron_retention	FALSE	canonical	2	2193	junction_3	274.737984268648	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	NA	False	NA	8	True	AATAAA	-15	NA	135144790	135171059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.102	chr3	+	2618	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-91	-12	-91	10	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTGCTATCTGTGCC	NA	False	NA	23	True	AATAAA	-24	NA	135144806	135172446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.104	chr3	+	3607	8	NNC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	-75	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	944.501056059737	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	-2	True	ATTAAA	-11	NA	135144822	135173952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144904_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.106	chr3	+	7503	6	NIC	ENSMUSG00000078578.10	novel	2515	7	NA	NA	-50	-7	intron_retention	FALSE	canonical	2	2193	junction_3	274.737984268648	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	-2	True	ATTAAA	-11	NA	135144847	135173952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.108	chr3	+	2403	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-31	143	-31	10	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTGTGTTGAAGTG	NA	False	NA	15	True	AATAAA	-25	NA	135144866	135172291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.109	chr3	+	3048	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-26	-507	-26	230	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCCCACAAGGGTAAGA	NA	False	NA	8	True	AATAAA	-20	NA	135144871	135172941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.11	chr3	+	1506	8	NNC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	29	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	1043.08482837384	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144023	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170936
ES.22662.110	chr3	+	5950	6	NIC	ENSMUSG00000078578.10	novel	2515	7	NA	NA	-14	1	intron_retention	FALSE	canonical	2	2193	junction_3	274.737984268648	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTTTGACAAGTG	NA	False	NA	12	True	AATAAA	-13	NA	135144883	135172435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.111	chr3	+	1981	8	NNC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1210.94223728501	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144894	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135165969_135166044_135168710_135168805_135170955
ES.22662.113	chr3	+	2766	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	32	-283	32	6	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTGGACATGATTTG	NA	False	NA	NA	False	AATAAA	-35	NA	135144929	135172717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.114	chr3	+	5288	6	NIC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	32	0	intron_retention	FALSE	canonical	2	2193	junction_3	274.737984268648	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144929	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.115	chr3	+	3774	6	ISM	ENSMUSG00000078578.10	ENSMUST00000197134.3	2493	8	205	615	205	2	intron_retention	FALSE	canonical	2	2193	junction_4	233.674132072851	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135145176	135171821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710
ES.22662.116	chr3	+	4975	6	NNC	ENSMUSG00000078578.10	novel	2515	7	NA	NA	291	2	intron_retention	FALSE	non_canonical	0	0	junction_3	1230.13778090099	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135145262	135171821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135145560_135160946_135161011_135161106_135164636_135165735_135165842_135168710_135168805_135170936
ES.22662.117	chr3	+	1498	7	NNC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	324	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1017.89009721089	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135145295	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135145556_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.118	chr3	+	4093	7	NNC	ENSMUSG00000078578.10	novel	799	4	NA	NA	-4123	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1017.53012513417	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135156263	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135159878_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.119	chr3	+	187	1	FSM	ENSMUSG00000078578.10	ENSMUST00000196248.2	19300	1	15450	3663	-312	-749	mono-exon	FALSE	NA	NA	NA	NA	NA	1132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGGAACGAGT	NA	False	NA	NA	False	NA	NA	NA	135160074	135160261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135160100_135160300
ES.22662.12	chr3	+	2080	8	NNC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	944.837660173234	1261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144036	135172436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144107_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.120	chr3	+	5120	3	NIC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	720	3	intron_retention	FALSE	canonical	0	0	junction_2	1096.5	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGTGCTAT	NA	False	NA	16	True	AATAAA	-17	NA	135161106	135172439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135164637_135165735_135165842_135170955
ES.22662.121	chr3	+	9298	3	NNC	ENSMUSG00000078578.10	novel	940	2	NA	NA	991	2	intron_retention	TRUE	non_canonical	0	0	junction_2	1096.5	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135161377	135171821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135164637_135165735_135166531_135166577
ES.22662.122	chr3	+	4280	3	NNC	ENSMUSG00000078578.10	novel	1912	2	NA	NA	1398	3	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	1498.5	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCATGAGGCTGTGT	NA	False	NA	8	True	AATAAA	-18	NA	135165806	135172284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135166556_135166602_135168805_135170955
ES.22662.123	chr3	+	177	1	ISM	ENSMUSG00000078578.10	ENSMUST00000196564.2	940	2	1512	350	1512	297	mono-exon	FALSE	NA	NA	NA	NA	NA	1182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAAGTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	135165920	135166097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135165900_135166100
ES.22662.124	chr3	+	2249	2	FSM	ENSMUSG00000078578.10	ENSMUST00000196878.2	1912	2	-799	462	-799	0	multi-exon	FALSE	canonical	3	2999	junction_1	0	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135167419	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135168805_135170955
ES.22662.125	chr3	+	3206	2	FSM	ENSMUSG00000078578.10	ENSMUST00000196878.2	1912	2	377	-1671	377	-7	multi-exon	FALSE	canonical	3	2999	junction_1	0	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	-2	True	ATTAAA	-11	NA	135168595	135173952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135168805_135170955
ES.22662.126	chr3	+	2083	1	Intergenic	novelGene_18624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	CATAAA	-9	NA	135174862	135176945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135174900_135176900
ES.22662.127	chr3	+	3807	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	-121	-11	-121	11	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGTCTGCTTGACAAA	NA	False	NA	22	True	AATAAA	-30	NA	135191250	135277176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.128	chr3	+	5824	14	NIC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	-5	-2727	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	40.015085912587	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGACCTCTTGAATTT	NA	False	NA	NA	False	NA	NA	NA	135191366	135266264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135262384
ES.22662.129	chr3	+	2961	13	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.7780793345236	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAAGCTGCATTGAAC	NA	False	NA	3	True	AATAAA	-11	NA	135191371	135277157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217599_135250493_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.13	chr3	+	1239	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	52	221	-30	-221	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAGTCAAACACCC	NA	False	NA	21	True	AATAAA	-33	NA	135144046	135171598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.132	chr3	+	3447	16	NIC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	2	-73	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	41.2960046493605	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCACTGACAACTTGA	NA	False	NA	11	True	NA	NA	NA	135191381	135277092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135272248_135272392_135273224_135273483_135275975
ES.22662.133	chr3	+	3633	17	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	39.9452750647683	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135191388	135277165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135276000
ES.22662.134	chr3	+	3703	18	NIC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	9	-68	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	48.8454238647384	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGACAACTTGAAAGTT	NA	False	NA	16	True	TATAAA	-3	NA	135191394	135277097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135269439_135269559_135272248_135272392_135273224_135273483_135275975
ES.22662.135	chr3	+	3514	18	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	22	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	40.4313250033002	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCACTGACAACTTGA	NA	False	NA	11	True	NA	NA	NA	135191407	135277092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975_135276622_135276673
ES.22662.137	chr3	+	3619	18	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	25	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	49.6848894060772	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCACTGACAACTTGAAAG	NA	False	NA	14	True	TATAAA	-1	NA	135191410	135277095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135269439_135269559_135272314_135272392_135273224_135273483_135275975
ES.22662.138	chr3	+	5173	19	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	34	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.5607775323564	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCACTGACAACTTGAAAG	NA	False	NA	14	True	TATAAA	-1	NA	135191419	135277095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135269439_135269695_135269740_135271102_135272248_135272392_135273224_135273483_135275975
ES.22662.139	chr3	+	3489	17	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	41.2386347979659	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135191457	135277165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248172_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.140	chr3	+	3236	16	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	-10203	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.975134929657	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCACTGACAACTTGA	83	False	NA	11	True	NA	NA	NA	135212707	135277092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135212765_135216735_135216822_135217624_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.141	chr3	+	3096	13	NIC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	-58	-70	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	57.5511849477393	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCACTGACAACTTGAAAG	NA	False	NA	14	True	TATAAA	-1	NA	135228637	135277095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135269439_135269559_135272248_135272392_135273224_135273483_135275975
ES.22662.142	chr3	+	3038	12	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	37275	0	-49	0	3prime_fragment	FALSE	canonical	3	85	junction_3	26.9876004585883	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135228646	135277165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.143	chr3	+	2838	12	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	-17	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.2153764510975	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACAACTTGAAAGTTTA	NA	False	NA	18	True	TATAAA	-5	NA	135228678	135277099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135228929_135230277_135230389_135248172_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260522_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.144	chr3	+	2749	12	NNC	ENSMUSG00000028164.16	novel	3675	17	NA	NA	183	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.1444152851472	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCATTGAACACCAT	NA	False	NA	8	True	AATAAA	-16	NA	135228878	135277162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260574_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.145	chr3	+	3178	12	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	252	-62	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	47.973132976733	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTGAAAGTTTATTTG	NA	False	NA	22	True	TATAAA	-9	NA	135228947	135277103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135229432_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.146	chr3	+	3010	12	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	277	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.7187916635565	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAACTTGAAAGTTTATT	NA	False	NA	20	True	TATAAA	-7	NA	135228972	135277101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135229288_135230274_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.147	chr3	+	3042	13	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	283	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.970802568352	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCACTGACAACTT	NA	False	NA	9	True	NA	NA	NA	135228978	135277090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135229284_135229375_135229432_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.148	chr3	+	3103	12	NNC	ENSMUSG00000028164.16	novel	535	4	NA	NA	289	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	61.0698015483678	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135228984	135277165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135229432_135230277_135230389_135248172_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.149	chr3	+	2896	11	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	38763	3	1439	-3	3prime_fragment	FALSE	canonical	3	85	junction_2	25.4772447489912	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCATTGAACACCAT	NA	False	NA	8	True	AATAAA	-16	NA	135230134	135277162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.15	chr3	+	4884	7	NIC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	-30	4	intron_retention	FALSE	canonical	2	536	junction_1	788.822258532019	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144046	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.150	chr3	+	152	1	Intergenic	novelGene_18629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135233016	135233168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135233000_135233200
ES.22662.151	chr3	+	2789	10	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	56482	75	-2563	-75	3prime_fragment	FALSE	canonical	3	85	junction_1	26.629140262335	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCACTGACAACTT	5605	False	NA	9	True	NA	NA	NA	135247853	135277090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.152	chr3	+	2320	8	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	61919	75	-1374	-75	3prime_fragment	FALSE	canonical	3	146	junction_3	8.67555797182227	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCACTGACAACTT	NA	False	NA	9	True	NA	NA	NA	135253290	135277090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.153	chr3	+	2560	6	ISM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	64948	64	0	-64	3prime_fragment	FALSE	canonical	3	146	junction_1	10.2567051239665	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAACTTGAAAGTTTATT	NA	False	NA	20	True	TATAAA	-7	NA	135256319	135277101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ES.22662.16	chr3	+	5496	7	NIC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	-29	0	intron_retention	FALSE	canonical	2	536	junction_1	788.822258532019	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144047	135172436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.17	chr3	+	2761	7	NNC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	-23	2	intron_retention	FALSE	canonical	0	0	junction_1	1020.43575931505	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144053	135171821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144114_135145197_135145560_135160946_135161011_135161106_135161139_135164558_135165842_135168710_135168805_135170955
ES.22662.19	chr3	+	4108	7	NIC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	-17	2	intron_retention	FALSE	canonical	2	536	junction_1	788.822258532019	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144059	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.2	chr3	+	2095	8	NNC	ENSMUSG00000078578.10	novel	2493	8	NA	NA	-14924	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	943.491301886082	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTTTGACAAGTG	NA	False	NA	12	True	AATAAA	-13	NA	135128985	135172435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135129072_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.21	chr3	+	2336	8	NNC	ENSMUSG00000078578.10	novel	1512	8	NA	NA	-7	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1115.65161704371	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGGACATGATTTGTT	NA	False	NA	NA	False	AATAAA	-37	NA	135144069	135172719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164636_135165735_135165842_135168710_135168805_135170955
ES.22662.24	chr3	+	1768	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	-150	886	14	6	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGCCTGGATTAATCA	NA	False	NA	79	True	AATAAA	-19	NA	135144090	135171825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.25	chr3	+	3620	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	30	-2912	30	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144106	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.26	chr3	+	1477	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	39	-778	39	6	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGCCTGGATTAATCA	NA	False	NA	79	True	AATAAA	-19	NA	135144115	135171825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.27	chr3	+	1943	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	40	-1245	40	11	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCTGTGTTGAAGTGA	NA	False	NA	16	True	AATAAA	-26	NA	135144116	135172292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.28	chr3	+	2079	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	47	-1388	47	1	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTTTGACAAGTG	NA	False	NA	12	True	AATAAA	-13	NA	135144123	135172435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.29	chr3	+	2453	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-774	836	47	-221	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAGTCAAACACCC	NA	False	NA	21	True	AATAAA	-33	NA	135144123	135171598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.3	chr3	+	157	1	Antisense	novelGene_ENSMUSG00000105981.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAGATCTTAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	135132692	135132849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_135132700_135132800
ES.22662.31	chr3	+	1212	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	55	-529	55	-243	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGTTCTACAGAGAAT	NA	False	NA	-1	True	AATAAA	-11	NA	135144131	135171576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.32	chr3	+	2593	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	55	-1910	55	246	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGTATTCTTTGACT	NA	False	NA	24	True	AATAAA	-36	NA	135144131	135172957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.33	chr3	+	5341	7	NIC	ENSMUSG00000078578.10	novel	738	8	NA	NA	62	11	intron_retention	FALSE	canonical	2	236	junction_1	895.529948627565	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCTGTGTTGAAGTGA	NA	False	NA	16	True	AATAAA	-26	NA	135144138	135172292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.34	chr3	+	2189	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	-101	416	63	14	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTTGAAGTGACTT	NA	False	NA	19	True	AATAAA	-29	NA	135144139	135172295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.35	chr3	+	1897	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-756	1374	65	2	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144141	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.37	chr3	+	2371	9	NIC	ENSMUSG00000078578.10	novel	738	8	NA	NA	68	-7	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1212.13633721624	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTAAATATGTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	135144144	135172704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.38	chr3	+	2325	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	70	-1657	70	-7	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTAAATATGTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	135144146	135172704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.4	chr3	+	178	1	Antisense	novelGene_ENSMUSG00000105449.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAGTAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135137737	135137915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_135137700_135137900
ES.22662.40	chr3	+	5474	7	NIC	ENSMUSG00000078578.10	novel	738	8	NA	NA	71	0	intron_retention	FALSE	canonical	2	236	junction_1	895.529948627565	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144147	135172434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.41	chr3	+	2493	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-165	1505	-80	18	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCTGTGCCACTAAATC	NA	False	NA	31	True	AATAAA	-32	NA	135144160	135172454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.42	chr3	+	3993	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-160	0	-75	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144165	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.43	chr3	+	3821	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	-69	-1248	-69	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144171	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.44	chr3	+	2156	8	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_1	932.389841389604	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144175	135172434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.45	chr3	+	779	8	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_1	932.389841389604	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTTGATTTTCTTA	NA	False	NA	7	True	AATAAA	-14	NA	135144176	135171058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.46	chr3	+	2302	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-133	1664	-48	14	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTTGAAGTGACTT	NA	False	NA	19	True	AATAAA	-29	NA	135144192	135172295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.47	chr3	+	1818	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-121	2136	-36	4	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144204	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.48	chr3	+	1798	8	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1058.12390771669	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGAGTTAGCTGCCTGG	NA	False	NA	71	True	AATAAA	-11	NA	135144210	135171817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164629_135165735_135165842_135168710_135168805_135170955
ES.22662.49	chr3	+	3603	8	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_1	932.389841389604	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144253	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.5	chr3	+	1492	8	NNC	ENSMUSG00000078578.10	novel	608	8	NA	NA	-61	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	944.837660173234	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135143848	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135143946_135145406_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.50	chr3	+	3770	9	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1200.8508376876	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	-2	True	ATTAAA	-11	NA	135144293	135173952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144460_135145404_135145560_135159799_135159878_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.51	chr3	+	2504	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-604	615	0	0	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144293	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.52	chr3	+	1633	9	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_6	1195.23875752922	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144293	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135165969_135166044_135168710_135168805_135170955
ES.22662.53	chr3	+	2188	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	263	0	12	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGCTATCTGTGCCAC	NA	False	NA	25	True	AATAAA	-26	NA	135144293	135172448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.54	chr3	+	800	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	1651	0	2	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144293	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.55	chr3	+	2192	9	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	0	37126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1014.05201265763	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTCTTAGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	135144293	135211085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955_135172434_135211066
ES.22662.56	chr3	+	2106	8	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	944.837660173234	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTGCTATCTGTGCC	NA	False	NA	23	True	AATAAA	-24	NA	135144294	135172446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144381_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.57	chr3	+	2458	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	55	-9	2	9	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGACATGATTTGTTA	NA	False	NA	NA	False	AATAAA	-38	NA	135144295	135172720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.58	chr3	+	1708	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	55	741	2	151	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACAGTCTGTTACA	NA	False	NA	NA	False	AATATA	-16	NA	135144295	135171970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.59	chr3	+	1574	9	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	2	37126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1014.05201265763	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTCTTAGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	135144295	135211085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955_135171818_135211066
ES.22662.6	chr3	+	2186	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-53	-621	32	4	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTGACAAGTGCTATC	NA	False	NA	17	True	AATAAA	-18	NA	135143941	135172440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.60	chr3	+	1497	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	-30	2366	2	-226	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAAATTGGAAGTCAAA	NA	False	NA	16	True	AATAAA	-28	NA	135144295	135171593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.62	chr3	+	1474	8	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	944.837660173234	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144299	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144381_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.63	chr3	+	4968	7	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	3	2	intron_retention	FALSE	canonical	2	723	junction_1	723.087304549043	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGCTGCCTGGATTA	NA	False	NA	75	True	AATAAA	-15	NA	135144306	135171821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.64	chr3	+	4203	7	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	7	2	intron_retention	FALSE	canonical	2	723	junction_1	723.087304549043	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135144310	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.66	chr3	+	5426	7	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-8	9	intron_retention	FALSE	canonical	2	723	junction_1	723.087304549043	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAGGCTGTGTTGAAGT	NA	False	NA	14	True	AATAAA	-24	NA	135144317	135172290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.67	chr3	+	4620	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	-580	-1525	-8	0	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144317	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.68	chr3	+	1312	8	NNC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	-7	-221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1082.26531131772	1244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAGTCAAACACCC	NA	False	NA	21	True	AATAAA	-33	NA	135144318	135171598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164636_135165735_135165842_135168710_135168805_135170955
ES.22662.69	chr3	+	2654	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	78	-228	-7	228	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTCCCACAAGGGTAA	NA	False	NA	6	True	AATAAA	-18	NA	135144318	135172939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.7	chr3	+	773	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-20	759	-20	2	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGATTTTCTTATC	NA	False	NA	9	True	AATAAA	-16	NA	135143974	135171060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.70	chr3	+	1567	9	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1151.80379595442	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144329	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.72	chr3	+	2576	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	4	1253	4	-5	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAATATGTAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	135144329	135172706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.73	chr3	+	5114	7	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	4	5	intron_retention	FALSE	canonical	2	870	junction_1	671.973213751858	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCTGCCTGGATTAATC	NA	False	NA	78	True	AATAAA	-18	NA	135144329	135171824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.74	chr3	+	7080	7	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	4	-3	intron_retention	FALSE	canonical	2	723	junction_1	723.087304549043	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGGTCTTACTCAGT	NA	False	NA	2	True	ATTAAA	-15	NA	135144329	135173956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.75	chr3	+	2254	9	NNC	ENSMUSG00000078578.10	novel	787	9	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	1181.36218382637	1261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144467	135172434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135167222_135167311_135168710_135168805_135170955
ES.22662.76	chr3	+	783	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	152	2898	-30	3	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGATTTTCTTATCC	NA	False	NA	10	True	AATAAA	-17	NA	135144477	135171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.77	chr3	+	2040	9	FSM	ENSMUSG00000078578.10	ENSMUST00000198748.5	787	9	-26	-1227	-19	4	multi-exon	FALSE	canonical	2	7	junction_4	1137.45118027105	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCATGAGGCTGTGTT	NA	False	NA	9	True	AATAAA	-19	NA	135144488	135172285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.78	chr3	+	5567	7	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	-19	0	intron_retention	FALSE	canonical	2	870	junction_1	671.973213751858	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTTGACAAGTGC	NA	False	NA	13	True	AATAAA	-14	NA	135144488	135172436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.79	chr3	+	1523	8	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	938.443848689338	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144501	135171819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144632_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.8	chr3	+	3654	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	-1	-2141	-1	1	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTTACTCAGTAATT	NA	False	NA	6	True	ATTAAA	-19	NA	135143993	135173960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.81	chr3	+	3648	8	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	944.837660173234	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144503	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144619_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.82	chr3	+	1532	9	NNC	ENSMUSG00000078578.10	novel	787	9	NA	NA	-4	37126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	991.123068796202	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTCTTAGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	135144503	135211085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955_135171818_135211066
ES.22662.85	chr3	+	2626	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	187	1020	-2	228	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTCCCACAAGGGTAA	NA	False	NA	6	True	AATAAA	-18	NA	135144512	135172939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.86	chr3	+	1351	7	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	1017.1701622093	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGCTGCCTGGATTAA	NA	False	NA	76	True	AATAAA	-16	NA	135144515	135171822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144626_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.87	chr3	+	1526	8	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	986.846554662365	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144515	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170936
ES.22662.88	chr3	+	2041	8	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	944.501056059737	1261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGGATTGTTTGACAA	NA	False	NA	9	True	AATAAA	-10	NA	135144515	135172432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144551_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.89	chr3	+	1996	8	NNC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1151.64017906672	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCATGAGGCTGTGT	NA	False	NA	8	True	AATAAA	-18	NA	135144516	135172284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144636_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170936
ES.22662.9	chr3	+	1511	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	5	-4	5	4	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135143999	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.90	chr3	+	3685	9	FSM	ENSMUSG00000078578.10	ENSMUST00000198748.5	787	9	3	-2901	3	0	multi-exon	FALSE	canonical	2	7	junction_4	1137.45118027105	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144517	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.91	chr3	+	3797	9	NNC	ENSMUSG00000078578.10	novel	787	9	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1186.37841112143	1269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	False	NA	-2	True	ATTAAA	-11	NA	135144519	135173952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_135144626_135145404_135145560_135145915_135146081_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.92	chr3	+	7051	7	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	12	-1	intron_retention	FALSE	canonical	2	870	junction_1	671.973213751858	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGTCTTACTCAGTAA	NA	False	NA	4	True	ATTAAA	-17	NA	135144526	135173958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.94	chr3	+	5379	7	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	17	10	intron_retention	FALSE	canonical	2	870	junction_1	671.973213751858	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTGTGTTGAAGTG	NA	False	NA	15	True	AATAAA	-25	NA	135144531	135172291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.96	chr3	+	6336	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	212	-2715	23	2715	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTTGTGTTTGTGTAT	NA	False	NA	NA	False	TTTAAA	-5	NA	135144537	135176674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.97	chr3	+	1528	9	FSM	ENSMUSG00000078578.10	ENSMUST00000198748.5	787	9	24	-765	24	4	multi-exon	FALSE	canonical	2	7	junction_4	1137.45118027105	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCTGCCTGGATTAAT	NA	False	NA	77	True	AATAAA	-17	NA	135144538	135171823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.98	chr3	+	3626	8	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	938.443848689338	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144538	135173959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144632_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22662.99	chr3	+	2092	8	NIC	ENSMUSG00000078578.10	novel	3833	8	NA	NA	34	1	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	938.443848689338	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTGTTTGACAAGTG	NA	False	NA	12	True	AATAAA	-13	NA	135144548	135172435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_135144632_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ES.22663.1	chr3	-	2915	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	444	2	-74	-2	multi-exon	FALSE	canonical	3	215	junction_1	1	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTTTTCTTTTTTAT	NA	False	NA	-1	True	ATTAAA	-18	NA	135129242	135112174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135114652_135116771_135116987_135129019
ES.22663.10	chr3	-	3602	1	NIC	ENSMUSG00000028165.10	novel	3361	3	NA	NA	11007	1541	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATCCTTTGTTC	NA	False	NA	-24	True	AATACA	-8	NA	135117833	135114231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_135114200_135117800
ES.22663.2	chr3	-	14762	2	NNC	ENSMUSG00000028165.10	novel	1363	2	NA	NA	9	-1441	intron_retention	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTGTTGTATTTTTT	NA	False	NA	1	True	TTTAAA	-6	NA	135129156	135113613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135121164_135121944
ES.22663.3	chr3	-	6295	3	NNC	ENSMUSG00000028165.10	novel	3361	3	NA	NA	6027	-1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAACTCTTGTTGTATT	NA	False	NA	-3	True	TTTAAA	-2	NA	135122813	135113617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135114652_135116771_135121173_135121953
ES.22663.4	chr3	-	1406	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	506	1449	-12	-1449	multi-exon	FALSE	canonical	3	215	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGATAACTCTTGTTG	NA	False	NA	-7	True	NA	NA	NA	135129180	135113621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135114652_135116771_135116987_135129019
ES.22663.5	chr3	-	1228	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	540	1593	19	-1593	multi-exon	FALSE	canonical	3	215	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGATGCATAGTTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	135129146	135113765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135114652_135116771_135116987_135129019
ES.22663.6	chr3	-	995	3	NNC	ENSMUSG00000028165.10	novel	3361	3	NA	NA	-45	-1780	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_2	102	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCTTGTTGTGTGT	NA	False	NA	NA	False	CATAAA	-14	NA	135128885	135113952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135114652_135116771_135116987_135128804
ES.22663.7	chr3	-	1059	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	479	1823	-39	1777	multi-exon	FALSE	canonical	3	215	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTAGAAACAATTATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	135129207	135113995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135114652_135116771_135116987_135129019
ES.22663.8	chr3	-	2201	1	NIC	ENSMUSG00000028165.10	novel	3361	3	NA	NA	12636	1769	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTCCAATTAGAAAC	NA	False	NA	NA	False	AGTAAA	-9	NA	135116204	135114003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_135114000_135116200
ES.22663.9	chr3	-	858	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	444	2059	-74	1541	multi-exon	FALSE	canonical	3	215	junction_1	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATCCTTTGTTC	NA	False	NA	-24	True	AATACA	-8	NA	135129242	135114231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135114652_135116771_135116987_135129019
ES.22664.1	chr3	-	183	1	Intergenic	novelGene_18625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135203726	135203543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135203500_135203700
ES.22665.1	chr3	-	180	1	Intergenic	novelGene_18626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAATAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135223567	135223387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135223400_135223600
ES.22666.1	chr3	-	442	1	Intergenic	novelGene_18627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAACACAGAGAGGG	NA	False	NA	NA	False	TTTAAA	-38	NA	135231055	135230613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135230600_135231100
ES.22667.1	chr3	-	180	1	Intergenic	novelGene_18628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	135232860	135232680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135232700_135232900
ES.22668.1	chr3	-	113	1	Intergenic	novelGene_18630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	135257414	135257301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135257300_135257400
ES.22669.1	chr3	+	3281	1	Intergenic	novelGene_18631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGCAAAACTCACAGAGAA	2059	False	NA	NA	False	NA	NA	NA	135300995	135304276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135301000_135304300
ES.2267.1	chr10	-	172	1	Antisense	novelGene_ENSMUSG00000061759.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4399759	4399587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_4399600_4399800
ES.22670.1	chr3	-	4232	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	-115	0	-114	0	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTGATCTCTGCAAA	NA	False	NA	0	True	AATAAA	-25	NA	135397422	135290415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22670.10	chr3	-	3993	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	-101	225	-100	2	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTATCTGTGATTTA	NA	False	NA	2	True	AATAAA	-23	NA	135397408	135290640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22670.11	chr3	-	3786	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	-15	346	-14	-119	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCGGTGTCCTTTCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	135397322	135290761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22670.12	chr3	-	3368	1	NIC	ENSMUSG00000028163.18	novel	4117	25	NA	NA	-2441	-2735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	135302643	135299275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_135299300_135302600
ES.22670.13	chr3	-	3466	1	FSM	ENSMUSG00000028163.18	ENSMUST00000196246.2	4149	1	720	-37	720	37	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135327183	135323717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_135323700_135327200
ES.22670.14	chr3	-	3483	3	ISM	ENSMUSG00000028163.18	ENSMUST00000138602.3	3383	12	55	54160	54	-46756	5prime_fragment	FALSE	canonical	3	28	junction_2	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTAGCTTGCAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	135397253	135370510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_135373554_135375030_135375101_135396883
ES.22670.3	chr3	-	3412	20	NNC	ENSMUSG00000028163.18	novel	3007	23	NA	NA	-14418	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	14.6192678233129	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTGATCTCTGCA	NA	False	NA	-2	True	AATAAA	-23	NA	135342321	135290417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135342274
ES.22670.5	chr3	-	2366	12	NNC	ENSMUSG00000028163.18	novel	2520	13	NA	NA	-1599	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	17.5310821963508	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTGTCTGATCTCTGC	NA	False	NA	-3	True	AATAAA	-22	NA	135311219	135290418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135311175
ES.22670.6	chr3	-	4117	25	NNC	ENSMUSG00000028163.18	novel	4117	25	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	13.4285661516369	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTGTCTGATCTCTGC	NA	False	NA	-3	True	AATAAA	-22	NA	135397289	135290418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364848_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22670.7	chr3	-	3963	24	NIC	ENSMUSG00000028163.18	novel	4117	25	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.3140996844957	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTGTCTGATCTCTGC	NA	False	NA	-3	True	AATAAA	-22	NA	135397334	135290418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_135291277_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22670.8	chr3	-	3970	24	NIC	ENSMUSG00000028163.18	novel	4117	25	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	13.5973699224914	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATCTTGTCTGATCTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	135397313	135290419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ES.22671.1	chr3	+	176	1	Intergenic	novelGene_18632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGGAGCGAGCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	135418516	135418692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135418500_135418700
ES.22671.2	chr3	+	344	1	Intergenic	novelGene_18633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTAAAAAGAGCAGCATG	NA	False	NA	NA	False	NA	NA	NA	135418517	135418861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_135418500_135418900
ES.22672.1	chr3	-	5297	1	Intergenic	novelGene_18634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTGTCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	135480725	135475428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_135475400_135480700
ES.22673.1	chr3	+	3024	14	FSM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-709	-121	-63	121	multi-exon	FALSE	canonical	2	2	junction_13	74.4048576387099	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACAGTTTAATTTTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	136375821	136641661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ES.22673.11	chr3	+	2876	14	FSM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-682	0	-36	0	multi-exon	FALSE	canonical	2	2	junction_13	74.4048576387099	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	136375848	136641540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ES.22673.12	chr3	+	3981	14	NNC	ENSMUSG00000028161.18	novel	2194	14	NA	NA	-32	-882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.1290845086121	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAATGCGCATCCTTTC	NA	False	NA	7	True	AATAAA	-14	NA	136375852	136642606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136416279_136416353_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.13	chr3	+	2284	5	NNC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	-22	-8806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.139754795036	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGGGTGACATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	136375862	136578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136503486_136503688_136574362_136574488_136576087_136576253_136577462
ES.22673.14	chr3	+	4275	9	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-667	30098	-21	22	intron_retention	FALSE	canonical	3	194	junction_4	12.3389626792531	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTCTAGCCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	136375863	136611442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863
ES.22673.15	chr3	+	2198	10	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-660	30098	-14	22	5prime_fragment	FALSE	canonical	3	173	junction_9	16.3374900228558	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTCTAGCCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	136375870	136611442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059
ES.22673.16	chr3	+	2817	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-7	1948	-7	0	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	136375877	136641540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.17	chr3	+	6468	12	NIC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	-4	29	intron_retention	FALSE	canonical	3	173	junction_8	20.0927600957276	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	136375880	136641569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.18	chr3	+	3680	11	NNC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	-4	-882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	88.949198984589	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAATGCGCATCCTTTC	NA	False	NA	7	True	AATAAA	-14	NA	136375880	136642606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581966_136583393_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136627593_136627679_136634282_136634381_136640789
ES.22673.2	chr3	+	3942	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-62	878	-62	-878	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCGCATCCTTTCACTG	NA	False	NA	11	True	AATAAA	-18	NA	136375822	136642610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.20	chr3	+	6893	13	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-646	-1065	0	-883	intron_retention	FALSE	canonical	2	7	junction_12	57.2384753077469	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGAATGCGCATCCTTT	NA	False	NA	6	True	AATAAA	-13	NA	136375884	136642605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771
ES.22673.21	chr3	+	7712	13	NNC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	0	37	intron_retention	FALSE	non_canonical	0	0	junction_12	77.9896716808636	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136375884	136641577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587165_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136636022_136637561
ES.22673.22	chr3	+	7296	13	NNC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	0	-385	intron_retention	FALSE	non_canonical	0	0	junction_12	59.1065422210886	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAAACTATATTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	136375884	136641155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136636022_136637559
ES.22673.23	chr3	+	2536	11	NIC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	65.7742350772702	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TATAAA	-16	NA	136375898	136641538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_136376663_136503486_136503688_136574362_136574488_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.25	chr3	+	7740	13	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-610	-1948	36	0	intron_retention	FALSE	canonical	2	7	junction_12	57.2384753077469	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGATGTGAGTATTGCTTG	NA	False	NA	13	True	AATAAA	-22	NA	136375920	136643488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771
ES.22673.26	chr3	+	3026	12	ISM	ENSMUSG00000028161.18	ENSMUST00000056758.9	2194	14	-313	5860	-313	1381	5prime_fragment	FALSE	canonical	3	173	junction_9	15.8061605313815	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTCCATCAAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	136376217	136635680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282
ES.22673.27	chr3	+	6377	1	Intergenic	novelGene_18635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTCTTGTGGTCAAA	NA	False	NA	NA	False	GATAAA	-42	NA	136410617	136416994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_136410600_136417000
ES.22673.28	chr3	+	3539	14	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50664	-883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.1290845086121	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGAATGCGCATCCTTT	NA	False	NA	6	True	AATAAA	-13	NA	136427194	136642605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427438_136486122_136486322_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.29	chr3	+	3796	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50669	-342	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.1629106789042	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGAGAGTGTGGCG	NA	False	NA	NA	False	AATAAA	-16	NA	136427199	136643146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427358_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.3	chr3	+	3375	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-61	1444	-61	504	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGCTTCGTGGCCTGACAT	NA	False	NA	NA	False	AATAAA	-35	NA	136375823	136642044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.30	chr3	+	2222	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50678	41	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.1629106789042	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	136427208	136641581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427358_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.31	chr3	+	4327	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50679	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.2574258537055	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGATGTGAGTATTGCTTG	NA	False	NA	13	True	AATAAA	-22	NA	136427209	136643488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427484_136503413_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.32	chr3	+	3242	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50687	-878	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.1629106789042	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCGCATCCTTTCACTG	NA	False	NA	11	True	AATAAA	-18	NA	136427217	136642610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427358_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.33	chr3	+	2284	15	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50690	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	96.4116651846314	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGATGTGAGTATTGCTT	NA	False	NA	12	True	AATAAA	-21	NA	136427220	136643487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427358_136503486_136503688_136529798_136529906_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789_136641507_136643445
ES.22673.34	chr3	+	2417	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50695	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.2574258537055	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCTGGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	136427225	136641594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136427484_136503413_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.35	chr3	+	3101	12	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	127600	881	-36969	-881	3prime_fragment	FALSE	canonical	3	173	junction_8	20.1461601451751	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGCGCATCCTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	136503484	136642607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.36	chr3	+	3781	10	NIC	ENSMUSG00000028161.18	novel	4758	13	NA	NA	-36969	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	70.3469356690445	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGATGTGAGTATTGCTTG	NA	False	NA	13	True	AATAAA	-22	NA	136503484	136643488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136627593_136627679_136634282_136634381_136640789
ES.22673.37	chr3	+	4770	1	Intergenic	novelGene_18637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCAGTTGCAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	136527686	136532456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_136527700_136532500
ES.22673.38	chr3	+	3174	6	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	220307	9	2482	-9	3prime_fragment	FALSE	canonical	3	173	junction_2	26.026140705068	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGCAGTCGATGTGAG	NA	False	NA	4	True	AATAAA	-13	NA	136596191	136643479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.39	chr3	+	2831	6	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	-180	-341	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	88.5270580105314	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGAGAGTGTGGCGA	NA	False	NA	NA	False	AATAAA	-17	NA	136608729	136643147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136608778_136608822_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.4	chr3	+	2984	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-53	1827	-53	121	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACAGTTTAATTTTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	136375831	136641661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.5	chr3	+	2913	14	NNC	ENSMUSG00000028161.18	novel	2194	14	NA	NA	-51	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.1290845086121	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	TATAAA	-17	NA	136375833	136641539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_136376663_136468339_136468393_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.6	chr3	+	4528	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-45	275	-45	-275	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCCGTGGTTATTTGAA	NA	False	NA	NA	False	AATAAA	-36	NA	136375839	136643213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.7	chr3	+	4803	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-42	-3	-42	3	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTATTGCTTGTCT	NA	False	NA	16	True	AATAAA	-25	NA	136375842	136643491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22673.9	chr3	+	4644	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	-38	152	-38	-152	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAATGTGTGTGTTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	136375846	136643336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ES.22674.1	chr3	-	1267	1	Intergenic	novelGene_18636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTGCCACTGAAGG	NA	False	NA	NA	False	NA	NA	NA	136429288	136428021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_136428000_136429300
ES.22675.1	chr3	-	5203	1	Intergenic	novelGene_18638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAAGATACACAATAGACA	NA	False	NA	NA	False	NA	NA	NA	136579896	136574693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_136574700_136579900
ES.22676.1	chr3	+	3299	2	FSM	ENSMUSG00002076808.1_ENSMUSG00000046818.8	ENSMUST00000165845.2	446	2	-2519	-334	44	334	multi-exon	FALSE	canonical	3	67	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGCCAGTCATTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	137327278	137332269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137330035_137331726
ES.22676.2	chr3	+	2809	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	50	-137	50	137	multi-exon	FALSE	canonical	3	67	junction_2	6.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTATTTCTCATATT	NA	False	NA	NA	False	AATAAA	-20	NA	137329482	137334231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137329645_137329892_137330035_137331726
ES.22676.3	chr3	+	2903	2	FSM	ENSMUSG00000046818.8	ENSMUST00000165845.2	446	2	-300	-2157	65	-2	multi-exon	FALSE	canonical	3	67	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCCTTGGCCTCTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	137329497	137334092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137330035_137331726
ES.22676.4	chr3	+	2653	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	67	2	67	-2	multi-exon	FALSE	canonical	3	67	junction_2	6.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCCTTGGCCTCTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	137329499	137334092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137329645_137329892_137330035_137331726
ES.22676.5	chr3	+	2646	3	NNC	ENSMUSG00000046818.8	novel	2722	3	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	32.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCCTTGGCCTCTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	137329499	137334092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137329645_137329899_137330035_137331726
ES.22676.6	chr3	+	839	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	67	1816	67	343	multi-exon	FALSE	canonical	3	67	junction_2	6.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTGTAGTTTGCCTG	NA	False	NA	NA	False	AATAAA	-20	NA	137329499	137332278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137329645_137329892_137330035_137331726
ES.22676.7	chr3	+	1425	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	107	1190	107	969	multi-exon	FALSE	canonical	3	67	junction_2	6.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCATGGCTTCCCTGCC	NA	False	NA	NA	False	AATAAA	-13	NA	137329539	137332904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137329645_137329892_137330035_137331726
ES.22677.1	chr3	+	177	1	Intergenic	novelGene_18639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGCAACTTGAA	NA	False	NA	NA	False	NA	NA	NA	137470728	137470905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137470700_137470900
ES.22678.1	chr3	+	1443	1	Intergenic	novelGene_18640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATAAAAAGGAAAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	137486233	137487676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137486200_137487700
ES.22678.2	chr3	+	157	1	Intergenic	novelGene_18641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	137486474	137486631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137486500_137486600
ES.22679.1	chr3	+	181	1	Intergenic	novelGene_18642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	137529599	137529780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137529600_137529800
ES.2268.1	chr10	-	177	1	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTCC	NA	False	NA	NA	False	NA	NA	NA	4439304	4439127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4439100_4439300
ES.22680.1	chr3	-	373	1	Intergenic	novelGene_18643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCTCTTTTCCCACCT	NA	False	NA	NA	False	NA	NA	NA	137534364	137533991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_137534000_137534400
ES.22681.1	chr3	+	177	1	Intergenic	novelGene_18644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAATCTATCTGA	NA	False	NA	NA	False	NA	NA	NA	137547693	137547870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137547700_137547900
ES.22681.10	chr3	+	1110	4	ISM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	100	104	-4	0	intron_retention	FALSE	canonical	3	13832	junction_1	803.393220451023	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570347	137572579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771
ES.22681.11	chr3	+	1923	2	ISM	ENSMUSG00000037894.14	ENSMUST00000138010.3	870	3	-393	-283	-4	0	intron_retention	FALSE	canonical	3	15763	junction_1	0	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570347	137572579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137570972_137571280
ES.22681.12	chr3	+	960	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6398.03348693956	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCGTGGTACTTTTGT	NA	False	NA	29	True	ATTAAA	-18	NA	137570347	137572680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571896_137572146
ES.22681.13	chr3	+	845	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6351.56427090996	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTAGCTTTAAACTTG	NA	False	NA	-5	True	AATAAA	-10	NA	137570349	137572577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571787_137571902_137572146
ES.22681.14	chr3	+	894	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6429.91232444113	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTAAACTTGCTTAAT	NA	False	NA	1	True	AATAAA	-16	NA	137570349	137572583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570866_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.16	chr3	+	1646	3	FSM	ENSMUSG00000037894.14	ENSMUST00000138010.3	870	3	-391	-385	-2	-2	multi-exon	FALSE	canonical	3	14469	junction_2	647	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570349	137572681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570972_137571280_137571395_137571771
ES.22681.17	chr3	+	890	5	FSM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	16	-96	-2	-8	multi-exon	FALSE	canonical	3	143	junction_3	6290.0667921732	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATAACCCCGTGGTACT	NA	False	NA	24	True	ATTAAA	-13	NA	137570349	137572675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571840_137571902_137572146
ES.22681.18	chr3	+	1955	2	FSM	ENSMUSG00000037894.14	ENSMUST00000125821.2	882	2	-539	-534	-2	-2	multi-exon	FALSE	canonical	3	14469	junction_1	0	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570349	137572681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137571395_137571771
ES.22681.19	chr3	+	824	5	FSM	ENSMUSG00000037894.14	ENSMUST00000172696.2	349	5	-104	-371	-1	0	multi-exon	FALSE	canonical	1	14	junction_2	6119.89262058576	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570350	137572579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570458_137570893_137570972_137571318_137571395_137571771_137571902_137572146
ES.22681.2	chr3	+	159	2	Antisense	novelGene_ENSMUSG00000106629.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAATTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	137547695	137596529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_137547806_137596480
ES.22681.20	chr3	+	1420	3	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-1	4	intron_retention	FALSE	canonical	3	13832	junction_1	318.5	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTAAACTTGCTTAAT	NA	False	NA	1	True	AATAAA	-16	NA	137570350	137572583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137570458_137570893_137571395_137571771
ES.22681.21	chr3	+	2331	1	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570350	137572681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137570400_137572700
ES.22681.23	chr3	+	1080	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	103	-114	-1	114	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATGTGAAAGGGCCTG	NA	False	NA	NA	False	NA	NA	NA	137570350	137572797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.24	chr3	+	898	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6398.03348693956	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTAAACTTGCTTAATA	NA	False	NA	2	True	AATAAA	-17	NA	137570350	137572584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572115
ES.22681.25	chr3	+	850	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	501	junction_1	6213.99969323302	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570350	137572579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570905_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.26	chr3	+	855	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6398.03348693956	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTAGCTTTAAACTTGC	NA	False	NA	-4	True	AATAAA	-11	NA	137570350	137572578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571896_137572146
ES.22681.27	chr3	+	954	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6429.91232444113	1235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570353	137572681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570900_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.28	chr3	+	998	3	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	76	5	intron_retention	FALSE	canonical	3	14112	junction_2	178.5	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTAAACTTGCTTAATA	NA	False	NA	2	True	AATAAA	-17	NA	137570964	137572584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137571395_137571771_137571902_137572146
ES.22681.29	chr3	+	6546	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	-44	2975	-44	-2975	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAGCTACATGGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	137573391	137619343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
ES.22681.3	chr3	+	5180	3	Intergenic	novelGene_18645	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGAAAAGGCCATTTT	NA	False	NA	NA	False	AAAAAG	-43	NA	137557102	137562457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137558903_137558990_137561666_137561752
ES.22681.30	chr3	+	7512	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	97	1868	97	-1868	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTCAACTGGAAATATT	NA	False	NA	NA	False	NA	NA	NA	137573532	137620450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
ES.22681.31	chr3	+	1393	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	99	7985	99	-357	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGAAATCTTGGACTG	NA	False	NA	6	True	ATTAAA	-19	NA	137573534	137614333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
ES.22681.32	chr3	+	8956	9	NNC	ENSMUSG00000074212.8	novel	9477	8	NA	NA	105	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	13.6970571656834	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGGCTTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	137573540	137622318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105_137619838_137620253
ES.22681.33	chr3	+	2908	9	NNC	ENSMUSG00000074212.8	novel	9477	8	NA	NA	105	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.6970571656834	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTTCATTATATTT	NA	False	NA	NA	False	AATAAA	-26	NA	137573540	137622324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105_137614578_137621047
ES.22681.34	chr3	+	8818	10	NNC	ENSMUSG00000074212.8	novel	9477	8	NA	NA	-14	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	16.7361514522335	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTTCATTATATTT	NA	False	NA	NA	False	AATAAA	-26	NA	137573633	137622324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105_137619817_137620018_137620218_137620482
ES.22681.35	chr3	+	6977	9	NNC	ENSMUSG00000074212.8	novel	9477	8	NA	NA	2	-2084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.6970571656834	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTGAGATGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	137573649	137620234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105_137619817_137620018
ES.22681.36	chr3	+	1181	7	NIC	ENSMUSG00000074212.8	novel	9477	8	NA	NA	4	-357	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.9740516301441	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGAAATCTTGGACTG	NA	False	NA	6	True	ATTAAA	-19	NA	137573651	137614333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137610505_137610616_137611645_137611819_137614105
ES.22681.37	chr3	+	5814	1	FSM	ENSMUSG00000074212.8	ENSMUST00000195903.2	3700	1	3377	-5491	3377	-2137	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGTTGTTACTGTAT	NA	False	NA	NA	False	AATACA	-14	NA	137614367	137620181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137614400_137620200
ES.22681.38	chr3	+	5916	1	ISM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	42964	3	5409	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAAAAGGCTTGTCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	137616399	137622315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137616400_137622300
ES.22681.39	chr3	+	198	1	ISM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	46385	2300	8830	-2300	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGGTCAGGTCTTCAC	NA	False	NA	NA	False	NA	NA	NA	137619820	137620018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137619800_137620000
ES.22681.4	chr3	+	1271	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	-193	-9	-193	9	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTGTTTCTTTGTA	NA	False	NA	41	True	ATTAAA	-30	NA	137570054	137572692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.5	chr3	+	914	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	59	96	-27	8	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACTTGCTTAATAATC	NA	False	NA	5	True	AATAAA	-20	NA	137570306	137572587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.8	chr3	+	1404	4	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	14112	junction_3	709.278663306759	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTGGTACTTTTGTT	NA	False	NA	30	True	ATTAAA	-19	NA	137570346	137572681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137570972_137571280_137571395_137571771_137571902_137572146
ES.22681.9	chr3	+	889	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6429.91232444113	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTAAACTTGCTTAATA	NA	False	NA	2	True	AATAAA	-17	NA	137570346	137572584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137570458_137570875_137570972_137571280_137571395_137571771_137571902_137572146
ES.22682.1	chr3	-	232	1	Intergenic	novelGene_18646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACAAAACCCATCACCAC	NA	False	NA	NA	False	NA	NA	NA	137581227	137580995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_137581000_137581200
ES.22683.1	chr3	-	176	1	Intergenic	novelGene_18647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAACCAGG	NA	False	NA	NA	False	NA	NA	NA	137581675	137581499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_137581500_137581700
ES.22684.1	chr3	-	1535	1	Intergenic	novelGene_18648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTAGACTAGGGGTGCG	NA	False	NA	NA	False	NA	NA	NA	137589930	137588395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_137588400_137589900
ES.22685.1	chr3	-	3746	5	Antisense	novelGene_ENSMUSG00000081829.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAGGACAAAAA	NA	False	NA	NA	False	NA	NA	NA	137616946	137607607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_137608137_137609646_137609737_137610503_137610616_137611645_137611818_137614103
ES.22686.1	chr3	+	2981	6	NIC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	-28	0	intron_retention	FALSE	canonical	3	124	junction_3	79.1267337882716	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	32	False	NA	2	True	AATAAA	-22	NA	137624238	137634526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137632704_137633107_137633172_137633707
ES.22686.10	chr3	+	1241	6	ISM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	259	4	-59	-4	3prime_fragment	FALSE	canonical	3	124	junction_2	80.5068941147278	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAATGAGCTCTGTATAG	339	False	NA	-2	True	AATAAA	-18	NA	137624545	137634522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ES.22686.11	chr3	+	3559	4	FSM	ENSMUSG00000091512.6	ENSMUST00000200107.2	788	4	-2165	-606	-2165	-4	multi-exon	FALSE	canonical	3	274	junction_1	22.8375908439475	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAATGAGCTCTGTATAG	1752	False	NA	-2	True	AATAAA	-18	NA	137628385	137634522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137630932_137632569_137632704_137633107_137633172_137633707
ES.22686.2	chr3	+	1323	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	-28	0	-8	0	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	52	False	NA	2	True	AATAAA	-22	NA	137624258	137634526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ES.22686.4	chr3	+	1258	7	FSM	ENSMUSG00000091512.6	ENSMUST00000197064.5	733	7	21	-546	1	0	multi-exon	FALSE	canonical	2	2	junction_1	115.993773779266	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	81	False	NA	2	True	AATAAA	-22	NA	137624287	137634526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137624389_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ES.22686.5	chr3	+	1322	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.571389666971	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	96	False	NA	2	True	AATAAA	-22	NA	137624302	137634526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137624468_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ES.22686.6	chr3	+	4861	3	NIC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	16	2	intron_retention	FALSE	canonical	3	124	junction_2	61.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	96	False	NA	4	True	AATAAA	-24	NA	137624302	137634528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137624425_137624633_137625717_137630872
ES.22686.7	chr3	+	8979	4	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	-18	0	intron_retention	TRUE	non_canonical	0	0	junction_3	103.502012862875	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	98	False	NA	2	True	AATAAA	-22	NA	137624304	137634526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137624425_137624633_137624680_137625681_137630006_137630037
ES.22686.8	chr3	+	1245	7	NNC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	113.98745057632	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAATGAGCTCTGTATAG	112	False	NA	-2	True	AATAAA	-18	NA	137624318	137634522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137624411_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ES.22687.1	chr3	+	177	1	Intergenic	novelGene_18649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	137647174	137647351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_137647200_137647400
ES.22688.1	chr3	-	3102	9	NNC	ENSMUSG00000028159.15	novel	3083	9	NA	NA	-10	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.75640815054393	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGGTACATGTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	137687316	137636780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137638973_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ES.22688.2	chr3	-	2795	1	NIC	ENSMUSG00000028159.15	novel	3083	9	NA	NA	20896	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTTTTGTGGTACATG	NA	False	NA	NA	False	ATTAAA	-9	NA	137639578	137636783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_137636800_137639600
ES.22688.3	chr3	-	3028	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	33	22	18	-21	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCATGTTTTTGTGG	NA	False	NA	NA	False	ATTAAA	-3	NA	137687273	137636789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ES.22688.4	chr3	-	2877	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	22	184	7	-183	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTGTCAAGTTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	137687284	137636951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ES.22688.5	chr3	-	1379	9	FSM	ENSMUSG00000028159.15	ENSMUST00000029806.13	3083	9	26	1678	11	-2	multi-exon	FALSE	canonical	3	16	junction_1	5.49431524395898	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGGGTTGCTTTTGTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	137687280	137638445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_137638951_137641342_137641431_137643497_137643584_137644897_137644961_137646621_137646670_137655407_137655539_137667202_137667337_137671641_137671765_137687079
ES.22689.1	chr3	+	1767	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	-8	1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAATAACTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	137849200	137863321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.11	chr3	+	1554	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	11	1617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTTGTTTGCTGG	NA	False	NA	NA	False	AATACA	-14	NA	137849288	137863196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.12	chr3	+	4110	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-20	1622	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTGTTTGCTGGGCTCT	NA	False	NA	NA	False	AATACA	-19	NA	137849539	137863201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.13	chr3	+	2594	9	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	0	-1545	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	77.4528082124851	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTTTTCTAAAATTCAG	NA	False	NA	0	True	AATAAA	-15	NA	137849559	137864034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849719_137852047_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.14	chr3	+	4024	8	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCAAATCCTGTCAGC	NA	False	NA	NA	False	AATAAA	-12	NA	137849594	137865572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849753_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.15	chr3	+	1284	8	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-19	1295	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	63.2442624646211	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGGATCGTTTGGTTT	NA	False	NA	NA	False	AATGAA	-19	NA	137849602	137862874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849719_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.16	chr3	+	4879	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-6	-1533	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGGTTTTGTGAGGT	NA	False	NA	12	True	AATAAA	-27	NA	137849615	137864046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.17	chr3	+	4355	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-3	1946	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAAATGTTTCTGTAA	NA	False	NA	NA	False	NA	NA	NA	137849618	137863525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.18	chr3	+	3710	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-3	1301	intron_retention	FALSE	canonical	3	7	junction_1	62.9051764522587	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCGTTTGGTTTTGTGTA	NA	False	NA	NA	False	AAGAAA	-1	NA	137849618	137862880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.19	chr3	+	4109	9	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.3194579909744	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGTCAGCTAATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	137849627	137865579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137849757_137852047_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.2	chr3	+	2487	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	-7	1545	-7	-1542	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTAAAATTCAGGTT	NA	False	NA	3	True	AATAAA	-18	NA	137849201	137864037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.20	chr3	+	1400	9	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	10	1295	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.3194579909744	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGGATCGTTTGGTTT	NA	False	NA	NA	False	AATGAA	-19	NA	137849631	137862874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137849757_137852047_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.21	chr3	+	4669	7	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	357	2705	13	1295	3prime_fragment	FALSE	canonical	3	147	junction_6	16.8267313786394	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGGATCGTTTGGTTT	NA	False	NA	NA	False	AATGAA	-19	NA	137849634	137862874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.22	chr3	+	4382	9	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	78.101596494566	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGTCAGCTAATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	137849660	137865579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137850063_137852047_137852155_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.23	chr3	+	2419	8	NIC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-2	-1542	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65.2811814618978	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTAAAATTCAGGTT	NA	False	NA	3	True	AATAAA	-18	NA	137849668	137864037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137849757_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.24	chr3	+	3923	8	NNC	ENSMUSG00000004127.13	novel	588	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	63.2442624646211	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGTCAGCTAATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	137849668	137865579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849719_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.25	chr3	+	5799	7	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	391	1541	-2	-1541	3prime_fragment	FALSE	canonical	3	147	junction_6	16.8267313786394	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849668	137864038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.27	chr3	+	2604	7	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	3895	-1543	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.6644736496938	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCTAAAATTCAGGT	NA	False	NA	2	True	AATAAA	-17	NA	137853565	137864036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137854036_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.3	chr3	+	4032	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCAGCTAATGTTAAT	NA	False	NA	NA	False	AATAAA	-22	NA	137849201	137865582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.4	chr3	+	3359	7	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	-7	-1542	intron_retention	FALSE	canonical	0	0	junction_1	69.2836360349413	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTCTAAAATTCAGGTT	NA	False	NA	3	True	AATAAA	-18	NA	137849201	137864037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.7	chr3	+	6782	5	NIC	ENSMUSG00000004127.13	novel	4064	8	NA	NA	21	1301	intron_retention	FALSE	canonical	3	147	junction_4	17.0788612032536	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCGTTTGGTTTTGTGTA	NA	False	NA	NA	False	AAGAAA	-1	NA	137849250	137862880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.22689.8	chr3	+	1270	8	NNC	ENSMUSG00000004127.13	novel	4025	8	NA	NA	22	1296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2811814618978	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCGTTTGGTTTT	NA	False	NA	NA	False	AATGAA	-20	NA	137849251	137862875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_137849353_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ES.2269.1	chr10	-	9950	50	NIC	ENSMUSG00000096054.4	novel	27908	146	NA	NA	12490	725	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	1.15157028405436	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTCTGTGCTTTTTCTT	NA	False	NA	NA	False	TATAAA	-22	NA	5123036	4970191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_4972248_4980375_4980435_4981765_4981859_4982916_4983130_4984932_4985062_4987215_4987417_4990763_4990976_4991460_4991585_4993610_4993754_4997530_4997859_4998723_4998916_5002274_5002413_5002655_5002839_5006376_5006528_5007779_5007968_5011388_5011552_5022036_5022204_5025788_5025948_5033823_5033980_5036667_5036794_5047484_5047680_5049359_5049595_5052329_5052425_5053635_5053784_5054813_5054969_5057812_5057960_5058521_5058705_5060830_5061036_5061374_5061509_5063949_5064121_5066966_5067123_5072980_5073137_5073654_5073832_5074813_5074964_5076659_5076843_5077193_5077327_5078379_5078577_5080009_5080142_5081907_5082082_5090811_5091013_5093149_5093270_5096252_5096355_5103098_5103309_5103862_5104019_5104463_5104596_5107620_5107760_5111451_5111562_5112333_5112466_5118686_5118879_5122887
ES.2269.2	chr10	-	6317	28	NNC	ENSMUSG00000096054.4	novel	27908	146	NA	NA	31565	714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.28086047894745	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAAAACCTTGTCTG	8098	False	NA	NA	False	TATAAA	-11	NA	5060963	4970202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4972248_4980375_4980435_4981765_4981859_4982916_4983130_4984932_4985062_4987215_4987417_4990763_4990976_4991460_4991585_4993610_4993754_4997530_4997715_4998723_4998916_5002274_5002413_5002655_5002839_5006376_5006528_5007779_5007968_5011388_5011552_5022036_5022204_5025788_5025948_5033823_5033980_5036667_5036794_5047484_5047680_5049359_5049595_5052329_5052425_5053635_5053784_5054813_5054969_5057812_5057960_5058521_5058705_5060830
ES.2269.3	chr10	-	4121	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATGAA	-38	NA	4979471	4975350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_4975400_4979500
ES.2269.4	chr10	-	8736	52	NNC	ENSMUSG00000096054.4	novel	27908	146	NA	NA	-59	-9986	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.12877160506857	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCAACGTGTGGCT	NA	False	NA	NA	False	AATAAA	-32	NA	5144766	4981564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_4981859_4982916_4983130_4984932_4985062_4987215_4987417_4990763_4990976_4991460_4991585_4993610_4993754_4997530_4997715_4998723_4998916_5002274_5002413_5002655_5002839_5006376_5006528_5007779_5007968_5011388_5011552_5022036_5022204_5025788_5025948_5033823_5033980_5036667_5036794_5047484_5047680_5049359_5049595_5052329_5052425_5053635_5053784_5054813_5054969_5057812_5057960_5058521_5058705_5060830_5061036_5061374_5061509_5063949_5064121_5066966_5067123_5072980_5073137_5073654_5073832_5074813_5074964_5076659_5076843_5077193_5077327_5078379_5078577_5080009_5080142_5081907_5082082_5090811_5091013_5093149_5093270_5096252_5096355_5103098_5103309_5103862_5104019_5104463_5104596_5107620_5107760_5111451_5111562_5112333_5112466_5118686_5118879_5122887_5123062_5125721_5125917_5135395_5135558_5135752_5135921_5144472
ES.22690.1	chr3	-	4267	20	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	5.05043812037691	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTTTTGTCTTGGGTT	NA	False	NA	NA	False	AATAAA	-37	NA	137849144	137795615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839897_137844662_137844758_137848932
ES.22690.3	chr3	-	3998	18	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	43	-1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_17	5.55127093524895	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCTTTTGTCTTGGGTT	NA	False	NA	NA	False	AATAAA	-37	NA	137849106	137795615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137848932
ES.22690.5	chr3	-	4298	21	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	-308	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	5.33361978397411	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTTATTAGTAAAGCAG	NA	False	NA	NA	False	ATTAAA	-22	NA	137849457	137795803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839897_137844662_137844758_137848932_137849067_137849160
ES.22690.7	chr3	-	5406	17	NNC	ENSMUSG00000028158.15	novel	3963	18	NA	NA	3503	153	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	5.30182751511212	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCACAGTGTCCCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	137833635	137796662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818
ES.22690.8	chr3	-	3220	20	NNC	ENSMUSG00000028158.15	novel	3072	20	NA	NA	5	153	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	5.05043812037691	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCACAGTGTCCCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	137849144	137796662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810546_137810699_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839897_137844662_137844758_137848932
ES.22690.9	chr3	-	1453	1	ISM	ENSMUSG00000028158.15	ENSMUST00000197680.2	2012	2	1253	0	-327	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137849476	137848023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_137848000_137849500
ES.22691.1	chr3	-	1924	1	Antisense	novelGene_ENSMUSG00000004127.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTCTCAGCCATATT	3147	False	NA	NA	False	ATTAAA	-10	NA	137861177	137859253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_137859300_137861200
ES.22692.1	chr3	+	1331	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	155	6	-2	-6	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTGAGTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	137983409	137996453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
ES.22693.1	chr3	-	141	1	Intergenic	novelGene_18650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGCAGTCGTC	NA	False	NA	NA	False	NA	NA	NA	138030324	138030183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138030200_138030300
ES.22694.1	chr3	-	175	1	Intergenic	novelGene_18651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCTTAGATT	NA	False	NA	NA	False	NA	NA	NA	138145432	138145257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138145300_138145400
ES.22695.1	chr3	+	1511	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	-85	178	-85	78	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTTGAACATCTTGT	4839	False	NA	22	True	AATAAA	-19	NA	138148768	138161082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.10	chr3	+	5910	7	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	15	73	intron_retention	TRUE	canonical	0	0	junction_3	769.127373499778	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4958	False	NA	17	True	AATAAA	-14	NA	138148887	138161077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138152986_138153612_138154856_138155107_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.12	chr3	+	9794	4	NNC	ENSMUSG00000028138.9	novel	956	7	NA	NA	21	72	intron_retention	TRUE	non_canonical	0	0	junction_2	869.741340859453	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGTGAGTTGAACA	4964	False	NA	16	True	AATAAA	-13	NA	138148893	138161076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138154856_138155107_138157824_138157864
ES.22695.13	chr3	+	1378	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	21	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	714.735342189681	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGAGTTGAACATCTT	4964	False	NA	20	True	AATAAA	-17	NA	138148893	138161080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153705_138156669_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.14	chr3	+	2008	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	40	-444	21	444	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGCGCACTAAAGTCT	4964	False	NA	NA	False	TATAAA	-17	NA	138148893	138161704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.15	chr3	+	3860	7	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	21	71	intron_retention	FALSE	canonical	3	1845	junction_1	148.071679338833	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGTGAGTTGAAC	4964	False	NA	15	True	AATAAA	-12	NA	138148893	138161075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138148955_138151050_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138160568_138160845
ES.22695.16	chr3	+	3699	7	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	21	73	intron_retention	FALSE	canonical	3	1845	junction_1	146.902083791287	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4964	False	NA	17	True	AATAAA	-14	NA	138148893	138161077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138148955_138151050_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.17	chr3	+	7998	6	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	21	71	intron_retention	FALSE	canonical	0	0	junction_2	839.55764543002	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGTGAGTTGAAC	4964	False	NA	15	True	AATAAA	-12	NA	138148893	138161075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138152986_138153612_138154856_138155107_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.18	chr3	+	2435	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	21	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	719.202292474099	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGTGAGTTGAACA	4964	False	NA	16	True	AATAAA	-13	NA	138148893	138161076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138158447_138159639_138160428_138160568_138160845
ES.22695.19	chr3	+	8752	5	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	-20	71	intron_retention	TRUE	non_canonical	0	0	junction_2	888.542767682006	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGTGAGTTGAAC	4981	False	NA	15	True	AATAAA	-12	NA	138148910	138161075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138154859_138155107_138159639_138160428_138160568_138160845
ES.22695.2	chr3	+	5362	7	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	-14	72	intron_retention	FALSE	canonical	3	1845	junction_1	155.404222021869	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGTGAGTTGAACA	4910	False	NA	16	True	AATAAA	-13	NA	138148839	138161076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138148955_138151050_138152986_138153612_138153701_138156659_138156880_138157004_138159639_138160428_138160568_138160845
ES.22695.22	chr3	+	1711	9	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	1	75	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	723.66220322399	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGAGTTGAACATCT	5013	False	NA	19	True	AATAAA	-16	NA	138148942	138161079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138149332_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.23	chr3	+	1304	8	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	2194	202	2106	54	3prime_fragment	FALSE	canonical	3	1982	junction_2	114.955182038702	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATACTTTCTGCAT	7118	False	NA	-2	True	CATAAA	-33	NA	138151047	138161058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.25	chr3	+	7158	4	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	3460	-6	intron_retention	FALSE	canonical	3	1982	junction_1	98.6249911984224	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTACCAAGTATTCAGA	8472	False	NA	NA	False	AATAAA	-12	NA	138152401	138161254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138152986_138153612_138159639_138160428_138160568_138160845
ES.22695.3	chr3	+	3109	8	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	3	73	intron_retention	FALSE	canonical	3	1845	junction_1	144.401650733965	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4927	False	NA	17	True	AATAAA	-14	NA	138148856	138161077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138148955_138151050_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.4	chr3	+	4107	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	1	72	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	714.735342189681	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGTGAGTTGAACA	4944	False	NA	16	True	AATAAA	-13	NA	138148873	138161076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138154839_138155090_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.5	chr3	+	1587	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	28	-11	9	11	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTCTGTTAAGTTT	4952	False	NA	NA	False	AATAAA	-29	NA	138148881	138161271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.6	chr3	+	4224	8	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	10	73	intron_retention	FALSE	non_canonical	0	0	junction_4	743.028057261333	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGAGTTGAACAT	4953	False	NA	17	True	AATAAA	-14	NA	138148882	138161077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138154839_138155090_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.7	chr3	+	4252	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	11	75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	714.411777268544	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGAGTTGAACATCT	4954	False	NA	19	True	AATAAA	-16	NA	138148883	138161079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138153800_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ES.22695.8	chr3	+	5941	6	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	11	68	intron_retention	FALSE	canonical	3	1845	junction_1	160.84352644729	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTGTGTGTGAGTTG	4954	False	NA	12	True	AATAAA	-9	NA	138148883	138161072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138148955_138151050_138153701_138156659_138156880_138157004_138159639_138160428_138160568_138160845
ES.22695.9	chr3	+	1382	9	NNC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	12	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	719.202292474099	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGTGAGTTGAACA	4955	False	NA	16	True	AATAAA	-13	NA	138148884	138161076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159509_138159639_138160428_138160568_138160845
ES.22696.1	chr3	-	6644	3	Antisense	novelGene_ENSMUSG00000028138.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGGGATGAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	138158980	138152043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_138154850_138155102_138157814_138157853
ES.22697.1	chr3	-	2717	1	Antisense	novelGene_ENSMUSG00000028138.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGTTCCATTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	138163520	138160803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_138160800_138163500
ES.22698.1	chr3	-	4833	6	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	12813	-8	-1429	8	intron_retention	FALSE	canonical	3	305	junction_4	18.7978722200147	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTTGTATTTGTTGG	4281	False	NA	-1	True	ATTAAA	-23	NA	138182463	138164708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664
ES.22698.10	chr3	-	2421	10	NIC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	120.945758682187	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTTCTAGTTGTATT	NA	False	NA	-7	True	ATTAAA	-17	NA	138195141	138164714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138166262_138168125_138168192_138171984_138172129_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.11	chr3	-	6338	10	NIC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	305	junction_4	33.2079121912048	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	-9	True	ATTAAA	-15	NA	138195137	138164716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.12	chr3	-	2624	12	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-14	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	146.650086716252	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCACTTTTTCTAGTTGT	NA	False	NA	-10	True	ATTAAA	-14	NA	138195143	138164717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138176866_138176939_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.13	chr3	-	2604	12	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	140.708890037329	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCACTTTTTCTAGTTGT	NA	False	NA	-10	True	ATTAAA	-14	NA	138195137	138164717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184130_138184189_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.15	chr3	-	2407	10	NIC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	121.641651411121	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCCCACTTTTTCTAGT	NA	False	NA	-13	True	ATTAAA	-11	NA	138195145	138164720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138166262_138168125_138168192_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.16	chr3	-	2035	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	123	528	6	197	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCCAGGTGTGTGCACA	NA	False	NA	NA	False	NA	NA	NA	138195153	138165244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.17	chr3	-	6254	9	NIC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	44	-453	intron_retention	FALSE	canonical	3	305	junction_4	33.6078022935151	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGCCTCACCCCCTCA	NA	False	NA	-2	True	AATAAA	-25	NA	138195232	138165894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.18	chr3	-	1507	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	0	1179	0	-454	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCCTCACCCCCTC	NA	False	NA	-3	True	AATAAA	-24	NA	138195276	138165895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.19	chr3	-	1367	11	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	6	-573	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	114.82874204658	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTCGTTTTGTTTTGA	NA	False	NA	NA	False	AATGAA	-14	NA	138195270	138166014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177926_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.2	chr3	-	2740	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	-48	-6	-48	6	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTAGTTGTATTTGTT	NA	False	NA	-3	True	ATTAAA	-21	NA	138195324	138164710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.20	chr3	-	1265	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	122	1299	5	-574	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCACTCGTTTTGTTTTG	NA	False	NA	NA	False	AATGAA	-13	NA	138195154	138166015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.3	chr3	-	2648	11	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	55	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	114.227185905983	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	138195221	138164712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179762_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.4	chr3	-	2720	11	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	114.779092172747	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	138195143	138164712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138189043_138195018
ES.22698.5	chr3	-	4013	5	NIC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	1163	4	intron_retention	FALSE	canonical	3	305	junction_3	18.2002747232013	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	6961	False	NA	-5	True	ATTAAA	-19	NA	138179783	138164712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664
ES.22698.6	chr3	-	2496	11	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	151.766959513591	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	138195145	138164712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138172148_138172230_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ES.22698.7	chr3	-	2650	12	NNC	ENSMUSG00000005813.13	novel	2686	11	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	141.758728796793	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTCTAGTTGTATTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	138195171	138164712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138193959_138194025_138195018
ES.22699.1	chr3	+	1545	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	772	-896	-88	81	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTATGTCTGCCTTTG	NA	False	NA	NA	False	TATAAA	-32	NA	138232957	138262056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.10	chr3	+	1223	6	FSM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	-22	-472	-11	-68	multi-exon	FALSE	canonical	3	31	junction_2	769.465528792551	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTAATTTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	138233034	138261907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.11	chr3	+	1740	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-10	418	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACACTGATGTGGCTAT	NA	False	NA	NA	False	AATAAA	-23	NA	138233035	138262393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
ES.22699.12	chr3	+	2985	6	ISM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	851	-747	-9	-68	intron_retention	FALSE	canonical	3	1289	junction_1	235.532248322815	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTAATTTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	138233036	138261907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342
ES.22699.13	chr3	+	1220	6	NNC	ENSMUSG00000028156.13	novel	729	6	NA	NA	-9	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	780.905986659086	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTGTTTTTTGTA	NA	False	NA	14	True	AATAAA	-24	NA	138233036	138261916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138233076_138252081_138252179_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.14	chr3	+	2363	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	851	-1793	-9	978	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCATTGCTCTTATTAT	NA	False	NA	22	True	TATAAA	-15	NA	138233036	138262953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.16	chr3	+	4867	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	852	-4298	-8	1	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGCTTTTTTTGGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	138233037	138265458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.17	chr3	+	5153	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-8	695	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGGTCAATTGTTG	NA	False	NA	12	True	AATAAA	-27	NA	138233037	138262670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
ES.22699.18	chr3	+	4585	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-8	693	intron_retention	FALSE	canonical	3	1289	junction_1	304.757608600671	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATATTGGTCAATTGT	NA	False	NA	10	True	AATAAA	-25	NA	138233037	138262668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.19	chr3	+	4387	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-7	-70	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTTTGGTAATTTTTT	NA	False	NA	3	True	AATAAA	-13	NA	138233038	138261905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
ES.22699.2	chr3	+	1709	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	777	-1065	-83	250	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTCCTTTATTTCTC	NA	False	NA	31	True	AATAAA	-32	NA	138232962	138262225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.20	chr3	+	5275	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-1	1390	intron_retention	FALSE	canonical	3	1289	junction_1	304.757608600671	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTAGGATGTATCTT	NA	False	NA	NA	False	CATAAA	-23	NA	138233044	138263365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.21	chr3	+	7200	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	859	-6638	-1	2341	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATGCAAAGTGTCACGT	NA	False	NA	NA	False	AATACA	-17	NA	138233044	138267798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.22	chr3	+	3276	6	ISM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	859	-1046	-1	231	intron_retention	FALSE	canonical	3	1289	junction_1	235.532248322815	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCTTTTAGACAACTA	NA	False	NA	12	True	AATAAA	-13	NA	138233044	138262206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342
ES.22699.23	chr3	+	3750	6	ISM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-1522	1	707	intron_retention	FALSE	canonical	3	1289	junction_1	235.532248322815	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCAGTATGGTTTT	NA	False	NA	24	True	AATAAA	-39	NA	138233046	138262682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342
ES.22699.24	chr3	+	1392	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	1	81	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTATGTCTGCCTTTG	NA	False	NA	NA	False	TATAAA	-32	NA	138233046	138262056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
ES.22699.25	chr3	+	5381	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-4821	1	524	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCTGGCAGCCTCAC	NA	False	NA	NA	False	AATAAA	-22	NA	138233046	138265981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.26	chr3	+	4126	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	1	243	intron_retention	FALSE	canonical	3	1289	junction_1	304.757608600671	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTAGATTTGTCCTTT	NA	False	NA	24	True	AATAAA	-25	NA	138233046	138262218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.27	chr3	+	1317	7	NNC	ENSMUSG00000028156.13	novel	856	8	NA	NA	1	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	730.599012226725	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTTTGGTAATTTTTT	NA	False	NA	3	True	AATAAA	-13	NA	138233046	138261905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256761_138259323_138259483_138261150
ES.22699.28	chr3	+	2522	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	861	-1962	1	1147	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTCTATGTTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	138233046	138263122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.29	chr3	+	4533	7	NNC	ENSMUSG00000028156.13	novel	729	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	886.00728928529	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTGCTTGCTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	138233046	138265455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138233076_138252081_138252189_138256023_138256088_138256653_138256768_138259342_138259483_138261150_138264843_138265068
ES.22699.3	chr3	+	1878	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	832	-1289	-28	474	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGAGTGATGGACTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	138233017	138262449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.30	chr3	+	5839	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	1	1390	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTAGGATGTATCTT	NA	False	NA	NA	False	CATAAA	-23	NA	138233046	138263365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
ES.22699.31	chr3	+	1344	4	NIC	ENSMUSG00000028156.13	novel	729	6	NA	NA	4	239	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	966.090402947191	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGACAACTAGATTTGTC	NA	False	NA	20	True	AATAAA	-21	NA	138233049	138262214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138256653_138256768_138259342_138259483_138261150
ES.22699.32	chr3	+	3965	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	5	86	intron_retention	FALSE	canonical	3	1289	junction_1	304.757608600671	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGCCTTTGTATCT	NA	False	NA	NA	False	TATAAA	-37	NA	138233050	138262061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.33	chr3	+	1239	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	5	-68	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTAATTTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	138233050	138261907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
ES.22699.34	chr3	+	846	8	NNC	ENSMUSG00000028156.13	novel	4991	8	NA	NA	5	968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	685.074225086268	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGGAATTAATAGCATTG	NA	False	NA	12	True	TATAAA	-5	NA	138233050	138262943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150_138261253_138262745
ES.22699.35	chr3	+	1970	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	5	663	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACACAATAAACAAG	NA	False	NA	-20	True	NA	NA	NA	138233050	138262638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
ES.22699.36	chr3	+	4522	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	5	77	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAATTAGTATGTCTGCC	NA	False	NA	NA	False	TATAAA	-28	NA	138233050	138262052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
ES.22699.37	chr3	+	4788	1	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	5006	-16632	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATTTGAGTATAATTT	NA	False	NA	NA	False	AAGAAA	-12	NA	138238062	138242850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138238100_138242800
ES.22699.38	chr3	+	2721	1	Intergenic	novelGene_18652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	138246561	138249282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138246600_138249300
ES.22699.39	chr3	+	4623	6	ISM	ENSMUSG00000028156.13	ENSMUST00000196990.5	856	8	15691	-588	-7879	-68	3prime_fragment	FALSE	canonical	3	1684	junction_2	178.575474239885	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTAATTTTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	138248736	138261907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.40	chr3	+	2203	5	ISM	ENSMUSG00000028156.13	ENSMUST00000196990.5	856	8	20371	-1617	-3199	961	3prime_fragment	FALSE	canonical	3	1684	junction_1	198.459536178033	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACATACGGAATTAAT	NA	False	NA	5	True	GATAAA	-10	NA	138253416	138262936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.41	chr3	+	4905	3	NIC	ENSMUSG00000028156.13	novel	729	6	NA	NA	-2827	961	intron_retention	FALSE	canonical	3	1816	junction_1	203	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACATACGGAATTAAT	NA	False	NA	5	True	GATAAA	-10	NA	138253788	138262936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138256768_138259342_138259483_138261150
ES.22699.42	chr3	+	3956	1	Genic_Genomic	ENSMUSG00000028156.13	novel	NA	NA	NA	NA	5961	1075	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGATGTTTTCTGTGCCA	NA	False	NA	NA	False	AGTAAA	-16	NA	138262576	138266532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_138262600_138266500
ES.22699.5	chr3	+	2790	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	836	-2205	-24	1390	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTAGGATGTATCTT	NA	False	NA	NA	False	CATAAA	-23	NA	138233021	138263365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.6	chr3	+	2182	7	FSM	ENSMUSG00000028156.13	ENSMUST00000200020.5	1421	7	837	-1598	-23	783	multi-exon	FALSE	canonical	3	1289	junction_1	283.691978894168	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTCTGCAGTACGTAA	NA	False	NA	100	True	TTTAAA	-15	NA	138233022	138262758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.7	chr3	+	1545	6	FSM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	-34	-782	-23	242	multi-exon	FALSE	canonical	3	31	junction_2	769.465528792551	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAACTAGATTTGTCCTT	NA	False	NA	23	True	AATAAA	-24	NA	138233022	138262217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138233076_138252081_138252189_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.8	chr3	+	1616	7	NNC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-13	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	737.596716822049	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATTTGTCCTTTATT	NA	False	NA	27	True	AATAAA	-28	NA	138233032	138262221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256042_138256088_138256653_138256768_138259342_138259483_138261150
ES.22699.9	chr3	+	4703	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	-11	242	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAACTAGATTTGTCCTT	NA	False	NA	23	True	AATAAA	-24	NA	138233034	138262217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
ES.227.1	chr1	-	1855	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	11	-6	11	6	multi-exon	FALSE	canonical	3	40	junction_1	4.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGCCATTATTTTTCT	NA	False	NA	1	True	NA	NA	NA	33796865	33784558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33786098_33787297_33787408_33796659
ES.227.2	chr1	-	1785	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	-22	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.0988215187606	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTAGCATTGGCCATT	NA	False	NA	-7	True	NA	NA	NA	33796844	33784566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33785227_33785270_33786098_33787294_33787408_33796659
ES.227.3	chr1	-	1764	4	NNC	ENSMUSG00000042215.9	novel	1860	3	NA	NA	-5	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2968437932844	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTAGCATTGGCCATT	NA	False	NA	-7	True	NA	NA	NA	33796827	33784566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33785210_33785254_33786098_33787297_33787408_33796659
ES.227.5	chr1	-	2024	1	FSM	ENSMUSG00000042215.9	ENSMUST00000189741.2	955	1	-16	-1053	-2	1053	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCTTTCCTGTGGTGCT	NA	False	NA	NA	False	ATTAAA	-37	NA	33796824	33794800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33794800_33796800
ES.2270.1	chr10	-	5621	37	NNC	ENSMUSG00000096054.4	novel	6990	32	NA	NA	-25	8024	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.66368952654441	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGCAGACAATATGGATGA	NA	False	NA	NA	False	AATAAA	-20	NA	5500717	5278916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5279038_5279458_5279583_5280151_5280340_5282939_5283039_5283410_5283639_5287182_5287334_5289224_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ES.2270.2	chr10	-	7135	31	NIC	ENSMUSG00000096054.4	novel	6990	32	NA	NA	-169	-3	intron_retention	FALSE	canonical	2	5	junction_5	2.95221197673127	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTCCTTGATTTTGGT	NA	False	NA	NA	False	ATTAAA	-21	NA	5500861	5286943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ES.2270.3	chr10	-	5090	32	NIC	ENSMUSG00000096054.4	novel	27908	146	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.35731918226005	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATTCTTTTCCTTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	5500713	5286949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5287334_5289224_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ES.2270.4	chr10	-	6017	31	NIC	ENSMUSG00000096054.4	novel	6990	32	NA	NA	-35	-979	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	2.95221197673127	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTAGGAAAGTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	5500727	5287927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ES.2270.5	chr10	-	5378	31	NIC	ENSMUSG00000096054.4	novel	6990	32	NA	NA	-147	-1730	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	2.95221197673127	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACAATCTCTTGTGTC	NA	False	NA	NA	False	TTTAAA	-23	NA	5500839	5288678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ES.2270.6	chr10	-	3395	1	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	5390828	5387433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_5387400_5390800
ES.22700.1	chr3	-	3734	1	Antisense	novelGene_ENSMUSG00000028156.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCCTTGCAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	138252102	138248368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_138248400_138252100
ES.22701.1	chr3	-	3675	3	Antisense	novelGene_ENSMUSG00000028156.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACCCCATAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	138261532	138254719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_138256094_138256656_138256768_138259342
ES.22702.1	chr3	+	4467	2	Intergenic	novelGene_18653	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTCGGTGTTTATCTTG	NA	False	NA	NA	False	NA	NA	NA	138270115	138274698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138272849_138272964
ES.22703.1	chr3	-	162	1	Intergenic	novelGene_18654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTTTTTTTAAATGA	8731	False	NA	NA	False	NA	NA	NA	138281143	138280981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138281000_138281100
ES.22704.1	chr3	+	3100	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	-95	-5	15	5	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACGTCGTCTTACTTTT	4840	False	NA	24	True	AATAAA	-37	NA	138447970	138610192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.10	chr3	+	2945	7	NIC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	-46	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	67.6693349227616	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGTCGTCTTACTTTTT	4889	False	NA	25	True	AATAAA	-38	NA	138448019	138610193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448422_138574106_138574158_138596495_138596643_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.11	chr3	+	2361	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	68	4224	-42	7	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGCTCGCTGAGGTG	4893	False	NA	NA	False	AATAAA	-19	NA	138448023	138609442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.13	chr3	+	3665	8	NNC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.6457098947318	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4899	False	NA	18	True	AATAAA	-31	NA	138448029	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138603306_138603873_138603922_138604027_138604145_138608139
ES.22704.14	chr3	+	9363	6	NIC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	-34	0	intron_retention	FALSE	canonical	3	157	junction_5	13.2875881934985	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4901	False	NA	19	True	AATAAA	-32	NA	138448031	138610187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138602676_138603873_138603922_138604027
ES.22704.15	chr3	+	6943	7	NNC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	2	junction_3	72.1974530175561	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4916	False	NA	18	True	AATAAA	-31	NA	138448046	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600178_138600280_138602613_138602676_138603873_138603922_138604027
ES.22704.16	chr3	+	1446	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	106	5101	-4	147	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGGCCCTTAGCCG	4931	False	NA	10	True	AATACA	-21	NA	138448061	138608565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.17	chr3	+	3043	8	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.5918105367896	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4949	False	NA	18	True	AATAAA	-31	NA	138448079	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602555_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.18	chr3	+	2799	8	NIC	ENSMUSG00000028152.11	novel	422	4	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	61.5036086547043	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGTCGTCTTACTTTTT	5401	False	NA	25	True	AATAAA	-38	NA	138448531	138610193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448617_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.19	chr3	+	4918	1	NIC	ENSMUSG00000028152.11	novel	422	4	NA	NA	41	-146757	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGCATTTGGGAGCTC	5440	False	NA	NA	False	GATAAA	-31	NA	138448570	138453488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448600_138453500
ES.22704.2	chr3	+	3162	9	NNC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.3886296557834	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4849	False	NA	18	True	AATAAA	-31	NA	138447979	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138484083_138484161_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.20	chr3	+	2766	8	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	-8537	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.3123080313601	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	NA	False	NA	18	True	AATAAA	-31	NA	138507097	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138507221_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.21	chr3	+	2371	1	Intergenic	novelGene_18657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGAGCAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	138522149	138524520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138522100_138524500
ES.22704.22	chr3	+	205	1	Intergenic	novelGene_18658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTAAGCCCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	138525233	138525438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138525200_138525400
ES.22704.23	chr3	+	174	1	Intergenic	novelGene_18663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATGCCAAATGAACCAAA	NA	False	NA	NA	False	NA	NA	NA	138592711	138592885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138592700_138592900
ES.22704.24	chr3	+	2767	7	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	28907	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5542200714389	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	NA	False	NA	18	True	AATAAA	-31	NA	138595160	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138595272_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.25	chr3	+	3283	4	ISM	ENSMUSG00000028152.11	ENSMUST00000121826.3	1114	8	35352	-1769	35352	0	3prime_fragment	FALSE	canonical	3	157	junction_2	10.2306728354819	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	NA	False	NA	19	True	AATAAA	-32	NA	138601605	138610187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.26	chr3	+	178	1	Intergenic	novelGene_18664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGCCAAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	138605570	138605748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_138605600_138605700
ES.22704.3	chr3	+	3156	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	25	3472	25	7	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTCGTCTTACTTTTTC	4850	False	NA	26	True	AATAAA	-39	NA	138447980	138610194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.4	chr3	+	2119	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	25	4509	25	-278	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGAGCGTGTTCCTTA	4850	False	NA	NA	False	NA	NA	NA	138447980	138609157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.5	chr3	+	3141	8	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	32	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.5036086547043	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACGTCGTCTTACTTTT	4857	False	NA	24	True	AATAAA	-37	NA	138447987	138610192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448416_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.6	chr3	+	3128	9	NIC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	45	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	77.3886296557834	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTCGTCTTACTTTTTC	4870	False	NA	26	True	AATAAA	-39	NA	138448000	138610194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448422_138484083_138484140_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.7	chr3	+	3057	8	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	62.2961983312835	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATCACGTCGTCTT	4871	False	NA	18	True	AATAAA	-31	NA	138448001	138610186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600178_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.8	chr3	+	2978	8	NNC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	69.3827008963579	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGATCACGTCGTCT	4885	False	NA	17	True	AATAAA	-30	NA	138448015	138610185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600178_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22704.9	chr3	+	1097	6	NIC	ENSMUSG00000028152.11	novel	3000	8	NA	NA	-48	136	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	71.207864734171	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTGGCTAAAACTTGG	4887	False	NA	-1	True	AATACA	-10	NA	138448017	138608554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_138448422_138574106_138574158_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ES.22705.1	chr3	-	3601	2	Antisense	novelGene_ENSMUSG00000028152.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACTCTAACCAGCTGT	6243	False	NA	NA	False	NA	NA	NA	138466021	138462334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_138464367_138464452
ES.22706.1	chr3	-	162	1	Intergenic	novelGene_18655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGAAGGATGAAGGCT	3313	False	NA	NA	False	NA	NA	NA	138468951	138468789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138468800_138469000
ES.22707.1	chr3	-	3107	1	Intergenic	novelGene_18656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTGGCACTCACCTAA	1648	False	NA	NA	False	NA	NA	NA	138492183	138489076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138489100_138492200
ES.22708.1	chr3	-	89	1	FSM	ENSMUSG00000086123.4	ENSMUST00000153140.2	478	1	427	-38	427	38	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	138534496	138534407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138534400_138534500
ES.22709.1	chr3	-	222	1	Intergenic	novelGene_18659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	138569530	138569308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138569300_138569500
ES.2271.1	chr10	-	1662	4	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGAGTCAATATTAA	NA	False	NA	NA	False	AATAAA	-13	NA	5723296	5717415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_5717527_5718012_5718631_5721110_5721261_5722513
ES.22710.1	chr3	-	168	1	Intergenic	novelGene_18660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAAAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	138572016	138571848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138571800_138572000
ES.22711.1	chr3	-	2808	1	Intergenic	novelGene_18661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATTTATTTATATTTT	NA	False	NA	NA	False	NA	NA	NA	138581515	138578707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138578700_138581500
ES.22712.1	chr3	-	159	1	Intergenic	novelGene_18662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	138586276	138586117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138586100_138586300
ES.22713.1	chr3	-	3872	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	-203	0	-203	0	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTACTTGGTTTCTTTGT	NA	False	NA	-2	True	AATAAA	-25	NA	138781165	138631662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.11	chr3	-	2263	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	-127	1247	4	-1247	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGTCTGGTTTTGTT	NA	False	NA	NA	False	TTTAAA	-32	NA	138780958	138632917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.12	chr3	-	3763	14	ISM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	41	13882	-12	979	5prime_fragment	FALSE	canonical	3	58	junction_9	11.1938275468192	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTTAGCAGACTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	138780921	138645544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.13	chr3	-	2726	13	FSM	ENSMUSG00000028149.13	ENSMUST00000200396.2	2622	13	-76	-28	-23	25	multi-exon	FALSE	canonical	3	34	junction_9	16.6224413235708	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTTTCCTCATT	NA	False	NA	NA	False	NA	NA	NA	138780985	138646498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.14	chr3	-	4845	2	ISM	ENSMUSG00000028149.13	ENSMUST00000196106.5	2811	14	125728	1	35125	-1	3prime_fragment	FALSE	canonical	3	99	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138655173	138646524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_138647620_138651423
ES.22713.15	chr3	-	4163	2	Genic_Genomic	ENSMUSG00000104724.2	novel	1770	1	NA	NA	-1969	586	multi-exon	TRUE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAATCTGAGATGCAA	NA	False	NA	NA	False	NA	NA	NA	138685811	138681486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_138684918_138685079
ES.22713.16	chr3	-	8534	6	Fusion	ENSMUSG00000104724.2_ENSMUSG00000028149.13	novel	1559	4	NA	NA	-23	586	multi-exon	TRUE	non_canonical	0	0	junction_1	34.3243353905068	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAATCTGAGATGCAA	NA	False	NA	NA	False	NA	NA	NA	138780985	138681486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_138684929_138685083_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.17	chr3	-	2939	5	ISM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	12	55471	12	-24240	5prime_fragment	FALSE	canonical	3	71	junction_1	7.84219357067906	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGAGGATGTCTGTACT	NA	False	NA	NA	False	AATAAA	-26	NA	138780886	138687137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.18	chr3	-	4819	1	Genic_Genomic	ENSMUSG00000028149.13	novel	NA	NA	NA	NA	-37	-21259	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGACGAACAAATATAT	NA	False	NA	NA	False	NA	NA	NA	138780999	138776180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_138776200_138781000
ES.22713.2	chr3	-	7563	12	NNC	ENSMUSG00000028149.13	novel	3383	14	NA	NA	8405	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.2197352639982	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTACTTGGTTTCTT	NA	False	NA	-5	True	AATAAA	-22	NA	138681893	138631665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138675668_138675737_138677394
ES.22713.5	chr3	-	3542	14	NIC	ENSMUSG00000028149.13	novel	3598	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	23.9889027598451	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	-6	True	AATAAA	-21	NA	138780989	138631666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22713.7	chr3	-	3456	14	NNC	ENSMUSG00000028149.13	novel	3383	14	NA	NA	37407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.1417474613878	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	-6	True	AATAAA	-21	NA	138743152	138631666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138675668_138675737_138721306_138721433_138727573_138727697_138743008
ES.22713.9	chr3	-	3767	16	NNC	ENSMUSG00000028149.13	novel	3669	15	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.2960210075331	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGAGATTACTTGGTT	NA	False	NA	-9	True	AATAAA	-18	NA	138780999	138631669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138675668_138675737_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ES.22714.1	chr3	-	179	1	Intergenic	novelGene_18665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAGAAAGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	138891394	138891215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_138891200_138891400
ES.22715.1	chr3	-	156	1	Intergenic	novelGene_18666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	139894361	139894205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_139894200_139894400
ES.22716.1	chr3	+	181	1	Intergenic	novelGene_18667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATAGCT	NA	False	NA	NA	False	NA	NA	NA	140464966	140465147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_140465000_140465100
ES.22717.1	chr3	-	4393	1	Genic_Genomic	ENSMUSG00000105777.2	novel	NA	NA	NA	NA	-4265	-599	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTATCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	140470730	140466337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_140466300_140470700
ES.22718.1	chr3	-	1620	1	FSM	ENSMUSG00000047674.3	ENSMUST00000057860.3	2352	1	531	201	531	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGATTTTTTCTTC	NA	False	NA	5	True	AATAAA	-21	NA	140917585	140915965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_140916000_140917600
ES.22718.2	chr3	-	1469	1	FSM	ENSMUSG00000047674.3	ENSMUST00000057860.3	2352	1	546	337	546	-337	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTACTATGAATATCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	140917570	140916101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_140916100_140917600
ES.22719.1	chr3	+	180	1	FSM	ENSMUSG00000106071.2	ENSMUST00000199604.2	2612	1	396	2036	396	-2036	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTAGTATCTATG	NA	False	NA	NA	False	NA	NA	NA	141392709	141392889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_141392700_141392900
ES.2272.1	chr10	+	130	1	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5748922	5749052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_5748900_5749100
ES.22720.1	chr3	-	3612	13	NIC	ENSMUSG00000052430.16	novel	2147	12	NA	NA	-34	-690	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.276385399196283	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTCATCACATTTTGCT	NA	False	NA	NA	False	GATAAA	-17	NA	141875008	141544552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141546502_141548645_141548777_141550837_141551014_141562109_141562408_141563164_141563358_141568743_141568883_141570241_141570339_141576482_141576586_141577063_141577167_141586117_141586278_141687681_141687775_141783886_141783954_141874905
ES.22721.1	chr3	-	176	1	Intergenic	novelGene_18668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	141941038	141940862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_141940900_141941000
ES.22722.1	chr3	+	8019	3	Antisense	novelGene_ENSMUSG00000028273.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAATTACAATTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	141975982	142010258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_141983765_142009704_142009741_142010057
ES.22722.2	chr3	+	4716	1	Antisense	novelGene_ENSMUSG00000028273.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	141983562	141988278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_141983600_141988300
ES.22723.1	chr3	+	2673	1	Intergenic	novelGene_18669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTATGTGACTCATCTG	NA	False	NA	NA	False	TTTAAA	-25	NA	142070403	142073076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_142070400_142073100
ES.22724.1	chr3	+	269	1	Intergenic	novelGene_18670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGAGAAAAATCAACAAAC	NA	False	NA	NA	False	NA	NA	NA	142109000	142109269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_142109000_142109300
ES.22725.10	chr3	-	4695	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	6999	False	NA	-2	True	AATAAA	-21	NA	142101458	141945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.11	chr3	-	4983	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	55.4233078727313	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTGGCCTTTTTTT	7108	False	NA	-3	True	AATAAA	-20	NA	142101349	141945349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101275
ES.22725.13	chr3	-	4958	12	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.3411171508844	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTGGCCTTTTTTT	7029	False	NA	-3	True	AATAAA	-20	NA	142101428	141945349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142010053_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.17	chr3	-	4525	11	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	61.3250356705971	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCACGCCTGGCCTTTTT	7031	False	NA	-5	True	AATAAA	-18	NA	142101426	141945351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142058494_142058647_142097473_142097612_142101346
ES.22725.20	chr3	-	4879	13	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-8	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.8733751291526	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTATAGTGATACTT	7110	False	NA	-64	True	ATTAAA	-19	NA	142101347	141945410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964889_141965012_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101275
ES.22725.21	chr3	-	3249	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	4	1763	4	1327	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGGGGACAAGGTG	7007	False	NA	NA	False	AATAAA	-29	NA	142101450	141947113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.23	chr3	-	5093	12	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	10	1313	intron_retention	FALSE	canonical	3	150	junction_4	20.7802353648408	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTTACAGCTTAAATCT	7013	False	NA	NA	False	AATAAA	-15	NA	142101444	141947127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.24	chr3	-	3006	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	-9	2019	-6	1071	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTGACTTAGACAACTTT	6994	False	NA	NA	False	AGTAAA	-19	NA	142101463	141947369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.25	chr3	-	2374	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	26	2616	26	474	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTGTTTAGTGAGTG	7029	False	NA	NA	False	AATAAA	-19	NA	142101428	141947966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.26	chr3	-	2405	14	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-5	473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.1541934354757	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCTGTTTAGTGAGT	7084	False	NA	NA	False	AATAAA	-18	NA	142101373	141947967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142074533_142074621_142097473_142097612_142101346
ES.22725.27	chr3	-	2055	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	17	473	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCTGTTTAGTGAGT	7020	False	NA	NA	False	AATAAA	-18	NA	142101437	141947967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.28	chr3	-	4488	12	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	32	468	intron_retention	FALSE	canonical	3	150	junction_3	22.2966476374312	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAACTTTTCTGTTTAG	7035	False	NA	NA	False	AATAAA	-13	NA	142101422	141947972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.29	chr3	-	2896	7	ISM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	37	62490	37	0	5prime_fragment	FALSE	canonical	3	163	junction_3	22.2542130842679	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGGCCAAGAGTCTTTC	7040	False	NA	NA	False	AATATA	-16	NA	142101417	142007840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.3	chr3	-	6436	1	FSM	ENSMUSG00000028273.16	ENSMUST00000196050.2	2089	1	528	-4875	528	4	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCTGGCCTTTTTTTTTC	NA	False	NA	0	True	AATAAA	-23	NA	141951782	141945346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_141945300_141951800
ES.22725.30	chr3	-	1795	8	NIC	ENSMUSG00000028273.16	novel	1755	8	NA	NA	-16	4	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	82.223935141807	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTGTTTTCTTTCTTT	7062	False	NA	NA	False	AATAAA	-20	NA	142101395	142008071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.31	chr3	-	2977	6	NIC	ENSMUSG00000028273.16	novel	1196	8	NA	NA	36	-2	intron_retention	FALSE	canonical	3	163	junction_2	24.3474844696531	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTATACTTGTTTTCT	7039	False	NA	NA	False	AATAAA	-14	NA	142101418	142008077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.32	chr3	-	2120	8	FSM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	-49	-875	26	-26	multi-exon	FALSE	canonical	3	7	junction_1	69.1041804459183	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGTTGTAATAAAGTTG	7029	False	NA	NA	False	AATAAA	-18	NA	142101428	142008106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.33	chr3	-	3014	1	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-1000	-86509	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGTAAGTAAGAAAAAAG	9846	False	NA	NA	False	AATGAA	-43	NA	142098611	142095597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142095600_142098600
ES.22725.4	chr3	-	4956	14	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	27	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2966866163562	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCTGGCCTTTTTTTTTC	7030	False	NA	0	True	AATAAA	-23	NA	142101427	141945346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141946875_141946911_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.5	chr3	-	5135	14	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	17	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	69.7017314056598	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCTGGCCTTTTTTTTTC	7020	False	NA	0	True	AATAAA	-23	NA	142101437	141945346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_141987612_141987745_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22725.6	chr3	-	5273	15	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-37566	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	68.9144693198217	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCCTGGCCTTTTTTTTT	5741	False	NA	-1	True	AATAAA	-22	NA	142139023	141945347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346_142101424_142118363_142118544_142138918
ES.22725.7	chr3	-	5078	13	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.9351683250847	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7108	False	NA	-2	True	AATAAA	-21	NA	142101349	141945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101181
ES.22725.9	chr3	-	4959	13	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	53.8892898037779	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGCCTGGCCTTTTTTTT	7020	False	NA	-2	True	AATAAA	-21	NA	142101437	141945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965012_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ES.22726.1	chr3	+	5553	11	FSM	ENSMUSG00000040253.16_ENSMUSG00000105338.2	ENSMUST00000171263.8	2497	11	40	-3096	40	-3	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATATGGTGTGTATGTG	NA	False	NA	NA	False	AATAAA	-20	NA	142236142	142255907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142236201_142240277_142240474_142242057_142242186_142243772_142243883_142244482_142244680_142247116_142247363_142248609_142248891_142249682_142249896_142251210_142251314_142251622_142251817_142252080
ES.22727.1	chr3	+	5572	13	NIC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	-15	1060	intron_retention	FALSE	canonical	3	81	junction_2	10.9045734543916	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTCTGGCTCAGCATT	NA	False	NA	NA	False	AATAAA	-13	NA	142406796	142451348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.11	chr3	+	1688	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	13	187	13	2	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTGTACTTTCTC	NA	False	NA	25	True	AATACA	-39	NA	142406824	142450101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.12	chr3	+	1596	12	ISM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	20	6410	-9	-2829	5prime_fragment	FALSE	canonical	3	81	junction_2	10.5493723130027	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATTACTGTGACGCTC	NA	False	NA	NA	False	ATTAAA	-25	NA	142406831	142443878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532
ES.22727.14	chr3	+	2250	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	23	-385	-6	385	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAACTGTCTTCTGGCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	142406834	142450673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.15	chr3	+	3431	12	ISM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	30	4565	1	-984	intron_retention	FALSE	canonical	3	81	junction_2	10.5493723130027	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACGGCCCTACCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	142406841	142445723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532
ES.22727.16	chr3	+	2218	2	Intergenic	novelGene_18671	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTTGGTGTCTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	142418581	142420871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_142420578_142420649
ES.22727.17	chr3	+	1773	14	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.7770923328441	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTCCGTGTTGTACTT	NA	False	NA	21	True	AATACA	-35	NA	142418581	142450097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436386_142436470_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.18	chr3	+	1976	13	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10292	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.9270093383794	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTGTACTTTCTC	NA	False	NA	25	True	AATACA	-39	NA	142418583	142450101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432348_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.19	chr3	+	1640	12	ISM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	17158	187	-4906	2	3prime_fragment	FALSE	canonical	3	85	junction_6	9.52768909569011	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTGTACTTTCTC	NA	False	NA	25	True	AATACA	-39	NA	142423969	142450101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.20	chr3	+	1934	10	NNC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	-741	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.659863237109	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGTTGTACTTTCTCAT	NA	False	NA	27	True	AATACA	-41	NA	142428134	142450103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440312_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.21	chr3	+	3556	9	ISM	ENSMUSG00000040213.14	ENSMUST00000129775.8	1798	15	22107	3384	86	8	internal_fragment	FALSE	canonical	3	85	junction_4	9.66953980290686	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAATAGAGCTCCAAAT	NA	False	NA	NA	False	AATGAA	-36	NA	142428961	142446715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985
ES.22727.22	chr3	+	766	7	ISM	ENSMUSG00000040213.14	ENSMUST00000129775.8	1798	15	24884	6009	-2416	-2617	internal_fragment	FALSE	canonical	3	85	junction_2	10.5039675043925	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATATGCATTTATAGTA	NA	False	NA	NA	False	ATTAAA	-19	NA	142431738	142444090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985
ES.22727.23	chr3	+	1152	1	NIC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	-3586	3886	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	NA	False	NA	NA	False	AAGAAA	-40	NA	142439786	142440938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_142439800_142440900
ES.22727.24	chr3	+	3374	1	FSM	ENSMUSG00000040213.14	ENSMUST00000198957.2	3335	1	-48	9	-48	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	AAGAAA	-44	NA	142443324	142446698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142443300_142446700
ES.22727.3	chr3	+	1601	13	NIC	ENSMUSG00000040213.14	novel	1888	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	27.8910330074421	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTCCGTGTTGTACTT	NA	False	NA	21	True	AATACA	-35	NA	142406804	142450097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_142406937_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.4	chr3	+	1882	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-35	2359	-6	-16	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACAAAACCAACACA	NA	False	NA	NA	False	NA	NA	NA	142406805	142450272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.5	chr3	+	1988	14	NNC	ENSMUSG00000040213.14	novel	4206	14	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.5917868283258	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTCTCCGTGTTGTAC	NA	False	NA	19	True	AATACA	-33	NA	142406806	142450095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432348_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.7	chr3	+	1858	15	NNC	ENSMUSG00000040213.14	novel	4206	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.2926159235062	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTCCGTGTTGTACTT	NA	False	NA	21	True	AATACA	-35	NA	142406820	142450097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_142406937_142409672_142409839_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.8	chr3	+	4220	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	9	-2341	9	-2	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTTTGGTTATAG	NA	False	NA	NA	False	NA	NA	NA	142406820	142452629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22727.9	chr3	+	2935	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	12	-1059	12	1059	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTCTGGCTCAGCAT	NA	False	NA	NA	False	AATAAA	-12	NA	142406823	142451347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ES.22728.1	chr3	-	6358	1	Antisense	novelGene_ENSMUSG00000040213.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATGATCTCCAGCCAT	3810	False	NA	NA	False	NA	NA	NA	142426371	142420013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_142420000_142426400
ES.22729.1	chr3	-	176	1	Intergenic	novelGene_18672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTTAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	142466757	142466581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_142466600_142466800
ES.2273.1	chr10	-	4227	5	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-338	1378	intron_retention	TRUE	non_canonical	0	0	junction_1	337.37840402136	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAATTTCCGTAGTTGC	NA	False	NA	NA	False	NA	NA	NA	5755938	5747781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5749069_5749123_5749823_5750255_5750436_5751151_5752533_5755258
ES.2273.10	chr10	-	1721	5	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-292	-19	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	337.628771730136	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTTAGAGGTGTA	NA	False	NA	4	True	AATAAA	-26	NA	5755892	5749178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755750
ES.2273.11	chr10	-	2459	4	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	-19	intron_retention	FALSE	canonical	3	762	junction_1	9.0921211313239	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTTAGAGGTGTA	NA	False	NA	4	True	AATAAA	-26	NA	5755422	5749178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5749823_5750255_5751243_5751868_5752533_5755258
ES.2273.12	chr10	-	1883	6	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-320	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	312.210441849724	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATACACATAA	NA	False	NA	-28	True	NA	NA	NA	5755920	5749210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258_5755425_5755750
ES.2273.13	chr10	-	3170	2	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	-367	intron_retention	FALSE	canonical	3	770	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAACTTTAATTTAAGAA	NA	False	NA	NA	False	AAAAAG	-11	NA	5755422	5749526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5752533_5755258
ES.2273.14	chr10	-	1438	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	135	367	135	-367	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAACTTTAATTTAAGAA	NA	False	NA	NA	False	AAAAAG	-11	NA	5755465	5749526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ES.2273.2	chr10	-	1992	6	NNC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	183	298	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.210441849724	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATTGGGTGGATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	5755417	5748861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5749074_5749136_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ES.2273.3	chr10	-	2330	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	-383	-7	-383	7	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCAGGTTTTTTTTGTTT	NA	False	NA	-2	True	AATAAA	-19	NA	5755983	5749152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ES.2273.4	chr10	-	5011	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	-340	-5	-340	5	intron_retention	FALSE	canonical	3	762	junction_1	16.7531091641721	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGTTTTTTTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	5755940	5749154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
ES.2273.5	chr10	-	6137	2	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-320	2	intron_retention	FALSE	canonical	3	784	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTGCAGGTTTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	5755920	5749157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5751243_5751868
ES.2273.6	chr10	-	1582	4	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	362.55512990747	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755422	5749159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5749823_5751151_5751243_5751868_5752533_5755258
ES.2273.7	chr10	-	3003	5	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-342	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	334.600508068951	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755942	5749159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5754537
ES.2273.9	chr10	-	3430	3	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	-342	-1	intron_retention	FALSE	canonical	3	770	junction_2	7	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATGTGTGCAGGTTTT	NA	False	NA	-10	True	AATAAA	-44	NA	5755942	5749160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_5751243_5751868_5752533_5755258
ES.22730.1	chr3	+	1349	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	103	3	-75	-3	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTGTTATAGTATT	NA	False	NA	5	True	AATAAA	-12	NA	142470908	142489364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ES.22730.2	chr3	+	180	1	Intergenic	novelGene_18673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAACCTTACATATG	NA	False	NA	NA	False	NA	NA	NA	142477701	142477881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_142477700_142477900
ES.22730.3	chr3	+	1084	5	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	13145	21	12967	-21	3prime_fragment	FALSE	canonical	3	174	junction_4	17.8518206354422	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTTAAAACCAA	NA	False	NA	-13	True	ATTAAA	-15	NA	142483950	142489346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ES.22731.1	chr3	+	2317	2	NIC	ENSMUSG00000106550.2	novel	464	3	NA	NA	-192	-4112	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGTCATTTGCATAT	NA	False	NA	NA	False	ATTAAA	-21	NA	142587156	142599894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_142587382_142597802
ES.22731.2	chr3	+	3180	2	NIC	ENSMUSG00000106550.2	novel	464	3	NA	NA	-160	-3217	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTATCATGATGATAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	142587188	142600789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_142587382_142597802
ES.22731.3	chr3	+	4403	1	Genic_Genomic	ENSMUSG00000097858.3	novel	NA	NA	NA	NA	7237	1213	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTCATTTGCATATT	647	False	NA	NA	False	ATTAAA	-22	NA	142595492	142599895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_142595500_142599900
ES.22732.1	chr3	-	6234	23	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-12	24829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.040212685389	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCCAAAAGAACAGAACTT	NA	False	NA	NA	False	NA	NA	NA	142587777	142471833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142471849_142496662_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.11	chr3	-	5527	22	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-3	-616	combination_of_known_junctions	TRUE	canonical	1	11	junction_11	105.304762335431	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	-2	True	NA	NA	NA	142587754	142497278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516196_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.14	chr3	-	5970	20	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	7	-616	intron_retention	FALSE	canonical	3	374	junction_11	42.9183338388315	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	-2	True	NA	NA	NA	142587737	142497278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.15	chr3	-	4856	23	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	8	-616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.040212685389	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	-2	True	NA	NA	NA	142587736	142497278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142497713_142498418_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.16	chr3	-	6268	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-2	-616	intron_retention	FALSE	canonical	3	374	junction_12	41.7627525433849	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGTTTTAAGTTTTC	NA	False	NA	-2	True	NA	NA	NA	142587683	142497278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.17	chr3	-	5797	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-4	-617	intron_retention	FALSE	canonical	3	374	junction_12	41.9169118614432	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587769	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.19	chr3	-	4608	13	ISM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	69616	617	194	-617	intron_retention	FALSE	canonical	3	402	junction_7	23.4217076424604	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142518149	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287
ES.22732.2	chr3	-	2095	1	Intergenic	novelGene_18674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	AGTAAA	-19	NA	142483142	142481047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_142481000_142483100
ES.22732.21	chr3	-	6481	19	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	29	-617	intron_retention	FALSE	canonical	3	374	junction_10	42.8874496016414	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587715	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515479_142515584_142515716_142516121_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.22	chr3	-	5499	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-2	-617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	107.318015554636	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587683	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515411_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.23	chr3	-	5761	23	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-2	-617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	138.587204399037	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587746	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142584523_142584714_142587371
ES.22732.24	chr3	-	5792	23	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	28	-617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	138.587204399037	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587716	142497279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142584523_142584775_142587371
ES.22732.26	chr3	-	5569	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	1	-618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	143.18961312233	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTGGTTTTAAGTTT	NA	False	NA	-4	True	CATAAA	-45	NA	142587750	142497280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504801_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516120_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.28	chr3	-	5279	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-445	-621	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAATTTTGGTTTTAAG	NA	False	NA	-7	True	CATAAA	-42	NA	142588210	142497283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
ES.22732.29	chr3	-	5762	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	7	-621	intron_retention	FALSE	canonical	3	374	junction_12	41.8703654151716	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAATTTTGGTTTTAAG	NA	False	NA	-7	True	CATAAA	-42	NA	142587737	142497283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.3	chr3	-	4974	17	ISM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	53042	-13	296	13	3prime_fragment	FALSE	canonical	3	374	junction_13	38.0007709625739	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATTTTAAAAGGTATAAT	NA	False	NA	NA	False	AATAAA	-28	NA	142534723	142496649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641
ES.22732.30	chr3	-	5602	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	29	-624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	107.328854429726	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTAATTTTGGTTTT	NA	False	NA	-10	True	CATAAA	-39	NA	142587715	142497286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527210_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.31	chr3	-	5619	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	29	-626	intron_retention	FALSE	canonical	3	374	junction_12	41.9326543400248	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTGTAATTTTGGTT	NA	False	NA	-12	True	CATAAA	-37	NA	142587715	142497288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.32	chr3	-	5630	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-2	-635	intron_retention	FALSE	canonical	3	374	junction_12	41.9128858467178	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGATTGAAATTTGTA	NA	False	NA	-21	True	CATAAA	-28	NA	142587746	142497297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.33	chr3	-	5279	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	-36	964	-36	-964	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACAGTGTACAAAAATT	NA	False	NA	-13	True	ATTAAA	-18	NA	142587801	142497626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.35	chr3	-	5359	21	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-1	-1052	intron_retention	FALSE	canonical	3	374	junction_12	41.9169118614432	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCATACCTTTGTTGG	NA	False	NA	0	True	AATAAA	-23	NA	142587766	142497714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.37	chr3	-	4801	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-401	-1055	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCTGCATACCTTTGT	NA	False	NA	-3	True	AATAAA	-20	NA	142588166	142497717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
ES.22732.4	chr3	-	5902	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	-309	614	-309	-614	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	NA	False	NA	0	True	NA	NA	NA	142588074	142497276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.42	chr3	-	4976	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	31	1200	10	-1200	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATATGTTGCTGTAAATT	NA	False	NA	NA	False	AAAAAG	-5	NA	142587734	142497862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.44	chr3	-	4575	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	35	1597	14	1210	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTATTAGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	142587730	142498259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.45	chr3	-	4195	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-445	1102	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAATAATTTGATCAAA	NA	False	NA	NA	False	TATAAA	-37	NA	142588210	142498367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
ES.22732.46	chr3	-	4484	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	15	1708	1	1099	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCACAAATAATTTGATC	NA	False	NA	NA	False	TATAAA	-34	NA	142587750	142498370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.48	chr3	-	4402	22	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	5	1081	combination_of_known_junctions	FALSE	canonical	1	11	junction_11	105.304762335431	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCTGTACCTCAAAAGT	NA	False	NA	NA	False	TATAAA	-16	NA	142587739	142498388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516196_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.50	chr3	-	4232	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	19	1956	-2	851	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTGTAGGCATAT	NA	False	NA	NA	False	NA	NA	NA	142587746	142498618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.51	chr3	-	3899	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	52	2256	31	551	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATAGGGACATCAGC	NA	False	NA	NA	False	ATTAAA	-10	NA	142587713	142498918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.52	chr3	-	3828	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	-7	2386	-7	421	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATGAATTTTCTATA	NA	False	NA	9	True	AAGAAA	-23	NA	142587772	142499048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.53	chr3	-	3568	21	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	31	411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.079789243984	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATGTCTATTTGATGA	NA	False	NA	-1	True	AAGAAA	-13	NA	142587713	142499058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499703_142500185_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.54	chr3	-	3709	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	5	2493	5	314	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGCAATTATTTTTTTA	NA	False	NA	-98	True	TATAAA	-19	NA	142587760	142499155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.55	chr3	-	3642	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	-77	2642	-77	165	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAACCACTTTTTTA	NA	False	NA	12	True	AATAAA	-33	NA	142587842	142499304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.56	chr3	-	3456	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	29	152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.489302320643	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTTTAAAAAGAAGAAG	NA	False	NA	-1	True	AATAAA	-20	NA	142587715	142499317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500194_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.58	chr3	-	3526	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-1	147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.473416003179	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCTTATTTTTAAAAAGA	NA	False	NA	-6	True	AATAAA	-15	NA	142587766	142499322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517797_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.6	chr3	-	9180	19	NIC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-9942	-614	intron_retention	FALSE	canonical	3	374	junction_12	38.3442818503266	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	2646	False	NA	0	True	NA	NA	NA	142544998	142497276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142499776_142499863_142499945_142500148_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968
ES.22732.61	chr3	-	3221	21	ISM	ENSMUSG00000004591.17	ENSMUST00000173913.8	2924	22	-64	-147	4	147	intron_retention	FALSE	canonical	1	2	junction_20	106.207944618093	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCTTATTTTTAAAAAGA	NA	False	NA	-6	True	AATAAA	-15	NA	142587740	142499322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142587371
ES.22732.64	chr3	-	3457	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-2	145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	107.508539976136	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTCTTATTTTTAAAAA	NA	False	NA	-8	True	AATAAA	-13	NA	142587683	142499324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504801_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.65	chr3	-	3235	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-444	143	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATACTCTTATTTTTAAA	NA	False	NA	-10	True	AATAAA	-11	NA	142588209	142499326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
ES.22732.66	chr3	-	3419	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	7	2781	-7	26	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTTTTATACCTTAAT	NA	False	NA	NA	False	TATAAA	-22	NA	142587758	142499443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.67	chr3	-	3328	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-31	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.328854429726	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTACTGTTTTATACCTT	NA	False	NA	NA	False	TATAAA	-19	NA	142587712	142499446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527321_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.68	chr3	-	3304	20	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	1	1517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	112.783616027867	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATATATAAATG	NA	False	NA	NA	False	NA	NA	NA	142587750	142504195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371_142587582_142587635
ES.22732.69	chr3	-	3366	19	ISM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	7	7533	-7	1517	5prime_fragment	FALSE	canonical	3	374	junction_10	44.1103064578163	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATATATAAATG	NA	False	NA	NA	False	NA	NA	NA	142587758	142504195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.70	chr3	-	2582	16	NNC	ENSMUSG00000004591.17	novel	756	7	NA	NA	2	1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.369427426839	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCATTGTGTCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	142587749	142514345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142514499_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.71	chr3	-	1955	12	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	66	5683	-4	287	5prime_fragment	FALSE	canonical	3	374	junction_3	51.4683566430597	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGACTTTGATCTTGA	NA	False	NA	NA	False	NA	NA	NA	142587685	142516232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.72	chr3	-	6643	7	NIC	ENSMUSG00000004591.17	novel	2510	16	NA	NA	1	-4822	intron_retention	FALSE	canonical	3	467	junction_2	29.0975371237269	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGCTGGCTCAGTGGCT	NA	False	NA	NA	False	AATAAA	-15	NA	142587750	142522135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.73	chr3	-	3535	7	NIC	ENSMUSG00000004591.17	novel	2510	16	NA	NA	-31	1780	intron_retention	FALSE	canonical	3	467	junction_2	29.0975371237269	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGTCTCAAAATTATG	NA	False	NA	NA	False	AGTAAA	-17	NA	142587796	142525289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.74	chr3	-	3313	7	NIC	ENSMUSG00000004591.17	novel	2510	16	NA	NA	8	1618	intron_retention	FALSE	canonical	3	467	junction_2	29.0975371237269	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGAGATCAATGTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	142587736	142525451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.75	chr3	-	2990	7	NNC	ENSMUSG00000004591.17	novel	2510	16	NA	NA	-5	1340	intron_retention	FALSE	non_canonical	0	0	junction_4	192.130742522435	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGAAGTGATTCTTC	NA	False	NA	NA	False	NA	NA	NA	142587686	142525729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544963_142545124_142559174_142559476_142587371
ES.22732.76	chr3	-	1714	7	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	1	16515	1	5	5prime_fragment	FALSE	canonical	3	467	junction_2	29.0975371237269	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGAATATCACTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	142587750	142527064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.77	chr3	-	5883	6	ISM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	36	19487	29	-2967	5prime_fragment	FALSE	canonical	3	467	junction_1	26.2190770241822	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTCTTTGACTTGGTAT	NA	False	NA	NA	False	CATAAA	-5	NA	142587715	142530036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.78	chr3	-	1226	4	FSM	ENSMUSG00000004591.17	ENSMUST00000172916.2	1206	4	-23	3	-2	-3	multi-exon	FALSE	canonical	3	512	junction_1	9.41629792788369	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	142587767	142536001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_142536376_142544968_142545124_142559174_142559476_142587371
ES.22732.8	chr3	-	8869	3	NIC	ENSMUSG00000004591.17	novel	2808	21	NA	NA	-474	-614	intron_retention	FALSE	canonical	3	449	junction_1	16	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	NA	False	NA	0	True	NA	NA	NA	142509355	142497276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_142504807_142505565_142506864_142509314
ES.22733.1	chr3	+	182	1	Intergenic	novelGene_18675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGCTGGAACCTCA	NA	False	NA	NA	False	NA	NA	NA	142679323	142679505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_142679300_142679500
ES.22734.1	chr3	-	177	1	Intergenic	novelGene_18676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	142729250	142729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_142729100_142729200
ES.22735.1	chr3	-	178	1	Intergenic	novelGene_18677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATACATAAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	143889561	143889383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_143889400_143889600
ES.22736.1	chr3	-	1953	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	-321	37	-321	-37	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAAAACTTAAAAG	NA	False	NA	-38	True	NA	NA	NA	143911302	143894327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ES.22736.2	chr3	-	1741	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	-299	227	-299	-74	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTCTTGTCCTGATG	NA	False	NA	NA	False	AATACA	-16	NA	143911280	143894517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ES.22736.3	chr3	-	748	4	FSM	ENSMUSG00000028266.18	ENSMUST00000121112.6	1447	4	347	352	315	78	multi-exon	FALSE	canonical	3	31	junction_2	4.78423336480244	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTGCTTTCTACCCTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	143907746	143894744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573
ES.22736.4	chr3	-	516	1	Genic_Genomic	ENSMUSG00000028266.18	novel	NA	NA	NA	NA	-302	-3384	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-28	NA	143911283	143910767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_143910800_143911300
ES.22737.1	chr3	+	3624	1	Intergenic	novelGene_18679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAACCAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	144173454	144177078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_144173500_144177100
ES.22738.1	chr3	+	1856	1	Intergenic	novelGene_18682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATAAAACTGCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	144250340	144252196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_144250300_144252200
ES.22739.1	chr3	+	2920	1	Intergenic	novelGene_18683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAACTATTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	144269792	144272712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_144269800_144272700
ES.2274.1	chr10	-	176	1	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAACAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	5759773	5759597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_5759600_5759800
ES.22740.1	chr3	-	6947	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	11	778	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTTGTATTTCCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	144275931	144134688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.10	chr3	-	4987	8	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-32	-1402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.3139462799503	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTACTAGAGAACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	144275974	144136868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144219725_144219906_144275494
ES.22740.12	chr3	-	4287	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-64	1954	-64	-1954	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTCTATGTT	NA	False	NA	NA	False	AGTAAA	-38	NA	144276006	144137420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.14	chr3	-	4209	8	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-96	-1966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.7017326057859	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAATGTCAATGTGTGTG	NA	False	NA	NA	False	AGTAAA	-26	NA	144276038	144137432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144137660_144137757_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.15	chr3	-	3302	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-46	2921	-46	-2921	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTTAAAGTATTTATT	NA	False	NA	NA	False	TTTAAA	-43	NA	144275988	144138387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.16	chr3	-	3910	3	ISM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	130574	3270	130274	-3270	3prime_fragment	FALSE	canonical	3	89	junction_1	17	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCAGTGTTTTATC	NA	False	NA	NA	False	TATAAA	-16	NA	144145368	144138736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_144140476_144141222_144141381_144143355
ES.22740.17	chr3	-	2941	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-39	3275	-39	-3275	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATCTTCTCAGTGTT	NA	False	NA	NA	False	TATAAA	-11	NA	144275981	144138741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.18	chr3	-	2557	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	14534	-3275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.6276622713265	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATCTTCTCAGTGTT	NA	False	NA	NA	False	TATAAA	-11	NA	144261108	144138741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144261005
ES.22740.19	chr3	-	2492	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-53	3738	-53	-3738	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGTATTTCTCGTTTA	NA	False	NA	-8	True	AGTAAA	-21	NA	144275995	144139204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.2	chr3	-	6238	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-50	-11	-50	11	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGCGCCTTTAATTTCA	NA	False	NA	NA	False	AATAAA	-26	NA	144275992	144135455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.20	chr3	-	3041	6	NIC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-3	-3863	intron_retention	FALSE	canonical	3	121	junction_2	7.16658914686757	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGTGCTGTAAAT	NA	False	NA	NA	False	TTTAAA	-14	NA	144275922	144139329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.21	chr3	-	2123	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	22	4032	-1	-4032	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTCATGGCGTATCT	NA	False	NA	NA	False	NA	NA	NA	144275920	144139498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.22	chr3	-	1659	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	24	4494	1	-4494	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTGAATACCATTTC	NA	False	NA	NA	False	AATACA	-18	NA	144275918	144139960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.23	chr3	-	5607	1	Intergenic	novelGene_18678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	144166663	144161056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144161100_144166700
ES.22740.24	chr3	-	1730	3	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-26	-8695	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGCCTCTCAAGGAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	144275968	144168418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144169436_144170807_144171047_144275494
ES.22740.25	chr3	-	176	1	Intergenic	novelGene_18680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9231	False	NA	NA	False	NA	NA	NA	144190157	144189981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144190000_144190200
ES.22740.26	chr3	-	175	2	Intergenic	novelGene_18681	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144269141	144189981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144189998_144268982
ES.22740.27	chr3	-	2566	1	Intergenic	novelGene_18684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144273253	144270687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144270700_144273300
ES.22740.28	chr3	-	2346	1	FSM	ENSMUSG00000040151.10	ENSMUST00000199680.2	2321	1	2	-27	2	27	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTCAAAGTAACCCAG	NA	False	NA	NA	False	NA	NA	NA	144275917	144273571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144273600_144275900
ES.22740.3	chr3	-	5929	7	NIC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	12738	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	46.6276622713265	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGTATGCGCCTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144262904	144135460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144262710
ES.22740.4	chr3	-	6175	8	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-40	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.7017326057859	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGTATGCGCCTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144275982	144135460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144139641_144139688_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.6	chr3	-	5925	5	NIC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-3	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	55.3759875758437	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTAGTATGCGCCTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	144275922	144135461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144140476_144141222_144141381_144159712_144159799_144170807_144171047_144275494
ES.22740.7	chr3	-	4825	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	-45	1397	-45	-1397	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTAGAGAACTTATCTAA	NA	False	NA	NA	False	AATAAA	-25	NA	144275987	144136863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ES.22740.8	chr3	-	4547	5	NIC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	-8	-1401	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	55.3759875758437	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTAGAGAACTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	144275950	144136867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144140476_144141222_144141381_144159712_144159799_144170807_144171047_144275494
ES.22740.9	chr3	-	4772	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	0	-1401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.6276622713265	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTAGAGAACTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	144275919	144136867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171066_144275494
ES.22741.1	chr3	+	5574	5	NNC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	589.971609486423	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTCTGCTTTGTCCTTTC	NA	False	NA	25	True	AATAAA	-27	NA	144276180	144303438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144276561_144283346_144283515_144296372_144299841_144300008_144300712_144302583
ES.22741.2	chr3	+	1506	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	9	-1	9	1	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCCTTTCGTGT	NA	False	NA	29	True	AATAAA	-31	NA	144276195	144303442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ES.22741.3	chr3	+	1758	6	NNC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	661.785161513916	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	False	NA	22	True	AATAAA	-24	NA	144276210	144303435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144301013_144301288_144302583
ES.22741.4	chr3	+	7170	4	NNC	ENSMUSG00000037072.17	novel	1178	4	NA	NA	0	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	641.239944690493	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	False	NA	22	True	AATAAA	-24	NA	144276453	144303435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144276561_144283346_144283515_144296372_144299841_144300008
ES.22741.5	chr3	+	1052	4	NIC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	2	50	junction_1	612.511768594422	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	False	NA	22	True	AATAAA	-24	NA	144276474	144303435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144276561_144296372_144296437_144300661_144300712_144302583
ES.22741.6	chr3	+	1007	5	NNC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	585.165147629283	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCTTTGTCCTTTCGT	NA	False	NA	27	True	AATAAA	-29	NA	144276476	144303440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300701_144302788
ES.22741.7	chr3	+	1373	5	NNC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	65	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	589.582267372417	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	False	NA	22	True	AATAAA	-24	NA	144276539	144303435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144276779_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ES.22741.8	chr3	+	1957	4	ISM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	6337	6	-889	-6	3prime_fragment	FALSE	canonical	3	1332	junction_2	24.9577420631132	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	False	NA	22	True	AATAAA	-24	NA	144282523	144303435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_144283515_144296372_144296437_144300661_144300712_144302583
ES.22742.1	chr3	-	176	1	Intergenic	novelGene_18685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	144319227	144319051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144319100_144319200
ES.22743.1	chr3	+	180	1	Intergenic	novelGene_18686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGGCTGTCCTAGCT	NA	False	NA	NA	False	NA	NA	NA	144356158	144356338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_144356200_144356300
ES.22744.1	chr3	-	1389	10	NNC	ENSMUSG00000037062.14	novel	2584	10	NA	NA	-33	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	104.469027839728	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATAAATAGTTACTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	144425904	144390656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144390891_144397218_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.10	chr3	-	1848	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-52	2165	-52	337	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGCTGCCCAATAGGAA	NA	False	NA	55	True	AATAAA	-17	NA	144426148	144396769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.11	chr3	-	4856	4	ISM	ENSMUSG00000037062.14	ENSMUST00000199854.5	1416	10	18769	-280	-3969	280	3prime_fragment	FALSE	canonical	3	334	junction_2	14.0554457615387	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGACTCATTTATTAG	NA	False	NA	-2	True	AATAAA	-16	NA	144407197	144396826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138
ES.22744.13	chr3	-	1626	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-71	2406	-71	96	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATGTTAGCGATTTCA	NA	False	NA	NA	False	AATAAA	-27	NA	144426167	144397010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.14	chr3	-	7235	1	NIC	ENSMUSG00000037062.14	novel	2584	10	NA	NA	2042	-5379	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144410352	144403117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144403100_144410400
ES.22744.15	chr3	-	2649	1	Intergenic	novelGene_18687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTGCCGAGTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	144410352	144407703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144407700_144410400
ES.22744.2	chr3	-	6356	4	FSM	ENSMUSG00000037062.14	ENSMUST00000199350.5	665	4	-5693	2	3473	-2	multi-exon	FALSE	canonical	1	1	junction_1	165.305777273512	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATCATAAATAGTTACTC	NA	False	NA	NA	False	ATTAAA	-18	NA	144408921	144390657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144390901_144397660_144397890_144402614_144402716_144403138
ES.22744.3	chr3	-	1595	10	FSM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	-236	1225	-11	-8	multi-exon	FALSE	canonical	2	5	junction_1	102.941671126522	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTGCACATCATAAATAG	NA	False	NA	NA	False	ATTAAA	-12	NA	144426107	144390663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144390901_144397218_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.4	chr3	-	5940	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-42	-1937	-42	4	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTAGCTCTTTGTGTTC	NA	False	NA	-6	True	AATAAA	-20	NA	144426138	144392667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.5	chr3	-	4822	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-9	-852	-9	852	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAATACCTGTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	144426105	144393752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.6	chr3	-	4032	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	-53	-18	-53	18	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTTGCAGGAGATGAG	NA	False	NA	NA	False	AAAACA	-38	NA	144426149	144394586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.8	chr3	-	3144	10	NNC	ENSMUSG00000037062.14	novel	1416	10	NA	NA	-25	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.469027839728	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTTGCAGGAGATGAG	NA	False	NA	NA	False	AAAACA	-38	NA	144425896	144394586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144396584_144397218_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ES.22744.9	chr3	-	940	3	ISM	ENSMUSG00000037062.14	ENSMUST00000199854.5	1416	10	23296	-468	558	468	3prime_fragment	FALSE	canonical	3	334	junction_2	4	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCTGAGTCTTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	144402670	144396638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_144397294_144397660_144397890_144402614
ES.22745.1	chr3	-	2974	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	19950	151	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	5.74804314527997	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAAATGATGTCTAT	NA	False	NA	NA	False	TATAAA	-7	NA	144535168	144528232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534158
ES.22745.10	chr3	-	2999	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	19729	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.6378692207809	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCACAGTATTTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	144535389	144528388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144528713_144529013_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672
ES.22745.2	chr3	-	2869	5	ISM	ENSMUSG00000037033.10	ENSMUST00000159989.2	3361	14	20165	0	20165	0	3prime_fragment	FALSE	canonical	3	22	junction_4	3.53553390593274	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	ATTAAA	-23	NA	144534953	144528383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672
ES.22745.3	chr3	-	3026	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	19747	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	5.74804314527997	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	ATTAAA	-23	NA	144535371	144528383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534158
ES.22745.4	chr3	-	3234	4	NIC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	19529	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.9124245031395	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTATTTCCTTAATCT	NA	False	NA	NA	False	ATTAAA	-23	NA	144535589	144528383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533672
ES.22745.5	chr3	-	4053	3	NIC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20383	-3	intron_retention	FALSE	canonical	0	0	junction_2	14.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACAGTATTTCCTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	144534735	144528386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_144531209_144531662_144531831_144533672
ES.22745.6	chr3	-	1703	5	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20584	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.2167917228706	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACAGTATTTCCTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	144534534	144528386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533672_144533898_144534370
ES.22745.7	chr3	-	1974	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20160	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	6.43117407632541	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACAGTATTTCCTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	144534958	144528386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534794
ES.22745.8	chr3	-	2171	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20386	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	6.08604962188118	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCACAGTATTTCCTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	144534732	144528387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534370
ES.22745.9	chr3	-	1970	6	NNC	ENSMUSG00000037033.10	novel	3361	14	NA	NA	20375	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	6.78232998312527	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCACAGTATTTCCTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	144534743	144528387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_144529296_144530971_144531209_144531662_144531831_144533058_144533330_144533672_144533898_144534582
ES.22746.1	chr3	-	153	1	Intergenic	novelGene_18688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	144613831	144613678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144613700_144613800
ES.22747.1	chr3	+	3443	4	Fusion	ENSMUSG00000106361.2_ENSMUSG00000085773.4	novel	1623	4	NA	NA	114	-9559	multi-exon	FALSE	canonical	0	0	junction_1	5.24933858267454	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATATCAAGCCATCA	NA	False	NA	NA	False	AATAAA	-20	NA	144653435	144678762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_+_144653477_144653638_144653831_144673010_144674789_144677330
ES.22747.2	chr3	+	909	2	NNC	ENSMUSG00000085773.4	novel	1623	4	NA	NA	211	12982	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAGGAGAATAT	NA	False	NA	NA	False	ATTAAA	-12	NA	144653532	144673621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144653831_144673010
ES.22748.1	chr3	-	178	2	Intergenic	novelGene_18689	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144662766	144630651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144630671_144662607
ES.22748.2	chr3	-	178	1	Intergenic	novelGene_18690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144662766	144662588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_144662600_144662800
ES.22749.1	chr3	+	3582	1	Intergenic	novelGene_18691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTCGTACTGTCATT	4245	False	NA	NA	False	TATAAA	-1	NA	144701602	144705184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_144701600_144705200
ES.2275.1	chr10	+	175	2	Antisense	novelGene_ENSMUSG00000019774.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	110	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5765027	5766561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_5765096_5766454
ES.2275.2	chr10	+	178	1	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5766383	5766561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_5766400_5766600
ES.2275.3	chr10	+	176	2	Antisense	novelGene_ENSMUSG00000019775.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	5766384	5785107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_5766544_5785090
ES.22750.1	chr3	+	1848	11	NNC	ENSMUSG00000028256.17	novel	2239	15	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.4530883025018	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144824317	144859654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.10	chr3	+	2254	15	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.1422018279677	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTTAATAACAGTATAA	NA	False	NA	NA	False	AATAAA	-14	NA	144824362	144859647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.11	chr3	+	2333	16	NNC	ENSMUSG00000028256.17	novel	2261	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	38.3090357777669	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTTAATAACAGTATA	NA	False	NA	NA	False	AATAAA	-13	NA	144824364	144859646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144851636_144851715_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.12	chr3	+	2245	16	NNC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-87	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26.9686237443935	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAATAACAGTATAAG	NA	False	NA	NA	False	AATAAA	-15	NA	144824647	144859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824690_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.13	chr3	+	7773	17	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	-77	-2	intron_retention	FALSE	canonical	0	0	junction_11	39.3048979136189	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAATAACAGTATAAG	NA	False	NA	NA	False	AATAAA	-15	NA	144824657	144859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144851590_144851688_144852523_144852683_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.14	chr3	+	2533	15	NIC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-74	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	32.5498048522317	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAATAACAGTATAAG	NA	False	NA	NA	False	AATAAA	-15	NA	144824660	144859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144825120_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.15	chr3	+	2623	16	NIC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-41	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	28.4320632776136	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTAATTTTAATAACAG	NA	False	NA	NA	False	AATAAA	-9	NA	144824693	144859642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144825120_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.16	chr3	+	7463	15	ISM	ENSMUSG00000028256.17	ENSMUST00000098539.7	2261	16	348	1	-26	-1	3prime_fragment	FALSE	canonical	3	65	junction_8	15.6329061630281	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTTTAATAACAGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	144824708	144859645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.17	chr3	+	1418	3	ISM	ENSMUSG00000028256.17	ENSMUST00000198764.2	764	7	4374	7112	-385	21	internal_fragment	FALSE	canonical	3	65	junction_2	11	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGTTCTTAGACATCAG	9604	False	NA	NA	False	NA	NA	NA	144837991	144843069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_144838579_144841385_144841496_144842348
ES.22750.18	chr3	+	2265	1	NIC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	2405	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	144840781	144843046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144840800_144843000
ES.22750.19	chr3	+	2802	3	NIC	ENSMUSG00000028256.17	novel	485	4	NA	NA	-2112	-2	intron_retention	FALSE	canonical	3	109	junction_2	2.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAATAACAGTATAAG	NA	False	NA	NA	False	AATAAA	-15	NA	144852666	144859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144854839_144856720_144856847_144859144
ES.22750.2	chr3	+	5650	13	NIC	ENSMUSG00000028256.17	novel	2239	15	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	28	junction_1	28.6398857462029	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAATAACAGTATAAG	NA	False	NA	NA	False	AATAAA	-15	NA	144824325	144859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_144824544_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144845656_144850072_144850178_144854291_144854839_144856720_144856847_144859144
ES.22750.20	chr3	+	1571	4	ISM	ENSMUSG00000028256.17	ENSMUST00000198808.5	3747	6	8061	-9	-1164	7	3prime_fragment	FALSE	canonical	3	109	junction_3	4.92160768674447	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTTTTAAAGATAGCAA	NA	False	NA	NA	False	AATAAA	-30	NA	144853614	144859663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.3	chr3	+	2061	16	NNC	ENSMUSG00000028256.17	novel	2425	16	NA	NA	-21	-101	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTGTTATGCTTTGTA	NA	False	NA	NA	False	GATAAA	-13	NA	144824327	144859286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.4	chr3	+	2425	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	-22	22	-21	0	multi-exon	FALSE	canonical	3	28	junction_1	23.1944437791084	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144824327	144859654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.5	chr3	+	2297	15	NNC	ENSMUSG00000028256.17	novel	2239	15	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	24.2331363624105	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144824330	144859654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.6	chr3	+	2584	17	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	34.3381620795289	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAGTATAAGTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	144824331	144859654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144852523_144852683_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ES.22750.7	chr3	+	2388	13	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	-17	1257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.247388297457	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTGTTTTGC	NA	False	NA	NA	False	AAGAAA	-16	NA	144824331	144853371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144852523
ES.22751.1	chr3	+	1223	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	-6	-90	-6	90	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCTAGGCATTCAGTG	NA	False	NA	139	True	NA	NA	NA	145281953	145309958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.10	chr3	+	1588	9	NIC	ENSMUSG00000074182.9	novel	2339	10	NA	NA	2	14	intron_retention	FALSE	canonical	0	0	junction_6	265.80679073342	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTTGAGCTAAGTG	NA	False	NA	63	True	ATTAAA	-37	NA	145281988	145309882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145301878_145301957_145306212_145306335_145309689
ES.22751.11	chr3	+	1063	10	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	245.375348656696	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281988	145309868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145282049_145282605_145282752_145283975_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.12	chr3	+	1223	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	227.48013100049	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281988	145309868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145282174_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.13	chr3	+	1751	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	29	-653	2	-29	multi-exon	FALSE	canonical	3	509	junction_1	98.0487633782293	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAATATGCATATTTATT	NA	False	NA	NA	False	AATATA	-16	NA	145281988	145310521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.14	chr3	+	1083	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	233.599143834047	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAAGTGCATGTTACT	NA	False	NA	46	True	ATTAAA	-20	NA	145281991	145309865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145282040_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.15	chr3	+	1639	12	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	-5	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	301.169977540758	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAACAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	145281996	145310441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145282115_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689_145309838_145309927
ES.22751.16	chr3	+	1576	9	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	258.830543019946	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145282011	145309868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300454_145306208_145306335_145309689
ES.22751.17	chr3	+	764	8	NNC	ENSMUSG00000074182.9	novel	2339	10	NA	NA	1969	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	278.776334895843	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGGAGAAAGTGCATGTT	NA	False	NA	43	True	ATTAAA	-17	NA	145284059	145309862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145284114_145284199_145284286_145288283_145288392_145298577_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.18	chr3	+	1236	7	NNC	ENSMUSG00000074182.9	novel	2339	10	NA	NA	6255	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	369.81977592696	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAACAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	145288345	145310441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145307852_145307945_145309689
ES.22751.19	chr3	+	2215	5	ISM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	14925	0	-4738	0	3prime_fragment	FALSE	canonical	3	657	junction_4	74.4949662728966	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	4138	False	NA	49	True	ATTAAA	-23	NA	145296884	145309868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.2	chr3	+	1741	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	-26	624	1	58	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGCTCCTGGTTCACC	NA	False	NA	107	True	TATAAA	-16	NA	145281960	145309926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.20	chr3	+	1971	1	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	6274	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTGCATGTTACTGC	NA	False	NA	48	True	ATTAAA	-22	NA	145307896	145309867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145307900_145309900
ES.22751.3	chr3	+	1872	11	NNC	ENSMUSG00000074182.9	novel	2339	10	NA	NA	2	-10	intron_retention	FALSE	canonical	0	0	junction_8	311.641605052984	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCACGGGGAGAAAGTGCA	NA	False	NA	39	True	ATTAAA	-13	NA	145281961	145309858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145305251_145305452_145306212_145306335_145309689
ES.22751.4	chr3	+	2069	11	NNC	ENSMUSG00000074182.9	novel	2339	10	NA	NA	6	-109	intron_retention	FALSE	canonical	0	0	junction_10	240.311651819049	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAACAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	145281965	145310441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689_145309746_145309927
ES.22751.7	chr3	+	1193	10	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	509	junction_1	101.090718334243	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281977	145309868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145282049_145282605_145282752_145283856_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.8	chr3	+	2327	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	-8	20	-8	-20	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTTATTCCCAATTTA	NA	False	NA	NA	False	AATATA	-25	NA	145281978	145310530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ES.22751.9	chr3	+	1091	11	NNC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	313.93336872655	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTGCATGTTACTGC	NA	False	NA	48	True	ATTAAA	-22	NA	145281981	145309867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145282040_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298644_145300362_145300436_145301878_145301957_145306212_145306335_145309689
ES.22752.1	chr3	+	173	1	Intergenic	novelGene_18692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGAACTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	145337173	145337346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145337200_145337300
ES.22753.1	chr3	-	2207	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	-190	2	-190	-2	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGAATGTATGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	145355926	145352732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
ES.22754.1	chr3	+	191	1	Intergenic	novelGene_18693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGGTGATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145414241	145414432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145414200_145414400
ES.22755.1	chr3	+	3846	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	-80	-2	-80	2	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTAGTGTCTGTCTCGTTT	NA	False	NA	11	True	AATAAA	-20	NA	145464349	145600034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ES.22755.10	chr3	+	395	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	-32	-42	-32	42	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACGC	8269	False	NA	NA	False	AATAAA	-17	NA	145584742	145585137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145584700_145585100
ES.22755.2	chr3	+	1348	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	-16	2432	-16	-1421	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGTGTTTGTGTCCTT	NA	False	NA	44	True	NA	NA	NA	145464413	145597600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ES.22755.3	chr3	+	2771	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	-16	1009	-16	2	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGTTGCCTTTGGGGGT	NA	False	NA	15	True	AATAAA	-20	NA	145464413	145599023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ES.22755.6	chr3	+	3326	6	NNC	ENSMUSG00000028194.16	novel	3764	6	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.217512680349	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTAGTGTCTGTCTCG	NA	False	NA	8	True	AATAAA	-17	NA	145464483	145600031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145464532_145551454_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ES.22755.7	chr3	+	5217	2	Intergenic	novelGene_18694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATACCTTCCCCATTC	NA	False	NA	NA	False	AGTAAA	-7	NA	145466576	145471958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145471440_145471604
ES.22755.8	chr3	+	174	1	Intergenic	novelGene_18695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTACCTCTTAGGAC	NA	False	NA	NA	False	NA	NA	NA	145486188	145486362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145486200_145486400
ES.22755.9	chr3	+	6000	3	Intergenic	novelGene_18696	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGGTTTGAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	145566408	145579228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145569016_145569052_145570846_145577628
ES.22756.1	chr3	-	3393	2	Antisense	novelGene_ENSMUSG00000028194.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAAGCTAGCCCGAGAG	NA	False	NA	NA	False	NA	NA	NA	145579125	145568949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_145570842_145577624
ES.22757.1	chr3	+	1412	1	Intergenic	novelGene_18697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGCTTTCTGTATA	NA	False	NA	NA	False	NA	NA	NA	145620000	145621412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145620000_145621400
ES.22758.1	chr3	+	2013	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	-42	-22	-42	22	multi-exon	FALSE	canonical	3	334	junction_2	11.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGGTTGTACATGTGT	NA	False	NA	109	True	AATATA	-31	NA	145629974	145640133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145630271_145636160_145636450_145638705
ES.22758.2	chr3	+	2253	4	NNC	ENSMUSG00000028191.12	novel	1949	3	NA	NA	30	-71	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	156.74253482135	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTCTGAGTCAGAAA	NA	False	NA	16	True	NA	NA	NA	145630046	145640040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145630271_145633206_145633612_145636160_145636450_145638705
ES.22758.3	chr3	+	2233	4	NNC	ENSMUSG00000028191.12	novel	1949	3	NA	NA	-26	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.979828852839	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGTGTCTGAGTCAGA	NA	False	NA	14	True	NA	NA	NA	145630085	145640038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145630271_145633185_145633612_145636160_145636450_145638705
ES.22758.4	chr3	+	2016	4	NNC	ENSMUSG00000028191.12	novel	1949	3	NA	NA	-16	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	168.291413922398	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGTGTCTGAGTCAGA	NA	False	NA	14	True	NA	NA	NA	145630095	145640038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145630271_145636160_145636450_145636785_145637005_145638705
ES.22758.5	chr3	+	2079	3	NNC	ENSMUSG00000028191.12	novel	660	2	NA	NA	3311	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATGTGTCTGAGTCAG	NA	False	NA	13	True	NA	NA	NA	145633422	145640037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145633881_145636160_145636450_145638705
ES.22758.6	chr3	+	1998	1	Genic_Genomic	ENSMUSG00000028191.12	novel	NA	NA	NA	NA	8895	893	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGTCTCAACCCTAG	NA	False	NA	NA	False	AATATA	-13	NA	145639006	145641004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_145639000_145641000
ES.22759.1	chr3	+	999	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	-6	554	-6	33	multi-exon	FALSE	canonical	3	242	junction_2	10.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643762	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644652_145644852_145649551
ES.22759.11	chr3	+	1319	3	NIC	ENSMUSG00000036873.14	novel	1644	4	NA	NA	1	33	intron_retention	FALSE	canonical	3	123	junction_1	59.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643797	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145644084_145644297_145644852_145649551
ES.22759.12	chr3	+	1760	5	NIC	ENSMUSG00000036873.14	novel	1644	4	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	56.5375981095766	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAACTTAGCATCTTGT	NA	False	NA	3	True	ATTAAA	-17	NA	145643807	145650582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145644084_145644297_145644425_145644652_145644852_145646949_145647042_145649516
ES.22759.13	chr3	+	988	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-231	-33	12	33	multi-exon	FALSE	canonical	3	74	junction_2	94.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643808	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644652_145644852_145649516
ES.22759.2	chr3	+	1370	3	NIC	ENSMUSG00000036873.14	novel	514	4	NA	NA	-1	33	intron_retention	FALSE	canonical	3	74	junction_2	13.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643767	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145644425_145644652_145644852_145649516
ES.22759.3	chr3	+	1577	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-264	-589	7	2	multi-exon	FALSE	canonical	3	74	junction_2	94.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAGCATCTTGTTTAT	NA	False	NA	7	True	ATTAAA	-21	NA	145643775	145650586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644652_145644852_145649516
ES.22759.4	chr3	+	1147	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-168	-465	8	33	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643776	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
ES.22759.5	chr3	+	1583	2	FSM	ENSMUSG00000036873.14	ENSMUST00000138876.2	545	2	-616	-422	-14	33	multi-exon	FALSE	canonical	3	74	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTATTACTGAATG	NA	False	NA	23	True	AATAAA	-13	NA	145643782	145650030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644852_145649516
ES.22759.7	chr3	+	1108	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	-10	546	-10	39	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTACTGAATGCCACTA	NA	False	NA	29	True	AATAAA	-19	NA	145643786	145650036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
ES.22759.8	chr3	+	1531	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	19	-3	-9	3	multi-exon	FALSE	canonical	3	242	junction_2	10.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGCATCTTGTTTATT	NA	False	NA	8	True	ATTAAA	-22	NA	145643787	145650587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644652_145644852_145649551
ES.22759.9	chr3	+	1653	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	-9	0	-9	0	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAACTTAGCATCTTGT	NA	False	NA	3	True	ATTAAA	-17	NA	145643787	145650582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
ES.2276.1	chr10	-	4176	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	21	1736	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTAGATGAAGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	5773889	5760150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
ES.2276.10	chr10	-	3172	4	NNC	ENSMUSG00000019774.9	novel	688	3	NA	NA	-2	-2583	intron_retention	FALSE	non_canonical	0	0	junction_1	17.8200885394982	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACCTTTCAGATTTT	NA	False	NA	NA	False	NA	NA	NA	5773912	5765794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5766382_5766591_5767613_5768927_5770105_5773525
ES.2276.11	chr10	-	2206	5	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	23	-2611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.6518764280634	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTCTACCAG	NA	False	NA	NA	False	NA	NA	NA	5773887	5765822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5766382_5766591_5767613_5768800_5768985_5770024_5770105_5773525
ES.2276.12	chr10	-	1227	2	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTCTACCAG	NA	False	NA	NA	False	NA	NA	NA	5767260	5765822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_5766368_5766578
ES.2276.13	chr10	-	1108	4	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	45	2219	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	11.0453610171873	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGTGAGGGTTTCTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	5773865	5766981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5767613_5768927_5768985_5770024_5770105_5773525
ES.2276.2	chr10	-	2173	1	Genic_Genomic	ENSMUSG00000019774.9	novel	NA	NA	NA	NA	3011	1315	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTGGTGAATAGCTT	NA	False	NA	NA	False	NA	NA	NA	5762744	5760571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_5760600_5762700
ES.2276.3	chr10	-	2614	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	-24	-2	-24	2	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAACCATTATGGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	5773934	5761884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ES.2276.4	chr10	-	5510	6	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	23	2	intron_retention	FALSE	non_canonical	0	0	junction_2	19.6834956245074	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAACCATTATGGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	5773887	5761884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5766382_5766591_5767613_5768800_5768985_5770024_5770105_5773525
ES.2276.5	chr10	-	1650	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-382	132	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAGACACAA	NA	False	NA	-23	True	NA	NA	NA	5774292	5763079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
ES.2276.6	chr10	-	1338	8	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-363	132	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.6299837359713	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAGACACAA	NA	False	NA	-23	True	NA	NA	NA	5774273	5763079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525_5773782_5774201
ES.2276.7	chr10	-	6078	5	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-349	132	intron_retention	FALSE	canonical	3	28	junction_4	9.35414346693485	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAGACACAA	NA	False	NA	-23	True	NA	NA	NA	5774259	5763079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927
ES.2276.9	chr10	-	1211	8	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	-363	132	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.4414472344658	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAGACACAA	NA	False	NA	-23	True	NA	NA	NA	5774273	5763079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525_5773782_5774201
ES.22760.1	chr3	+	176	1	Intergenic	novelGene_18698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	145662822	145662998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145662800_145663000
ES.22761.1	chr3	+	182	1	Intergenic	novelGene_18699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145679548	145679730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145679500_145679700
ES.22762.10	chr3	+	6716	6	NIC	ENSMUSG00000036863.13	novel	5495	7	NA	NA	-69	-4	intron_retention	FALSE	canonical	3	28	junction_1	25.160286166894	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATGCTATTGTAATTG	NA	False	NA	1	True	ATTAAA	-12	NA	145693555	145727471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145721583_145725557
ES.22762.16	chr3	+	5765	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	-168	-1787	99	366	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACAGCTGCAGGCTTTT	NA	False	NA	NA	False	GATAAA	-19	NA	145693723	145727841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.17	chr3	+	3558	6	NNC	ENSMUSG00000036863.13	novel	5495	7	NA	NA	7249	-311	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	34.7758536918938	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCAGTTTCTCAC	NA	False	NA	NA	False	TATAAA	-38	NA	145706674	145727164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_145706994_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.3	chr3	+	6113	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	-400	-1903	-133	482	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTCTATTCATGTGTG	NA	False	NA	NA	False	TTTAAA	-17	NA	145693491	145727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.4	chr3	+	5614	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-119	0	-119	0	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	5	True	ATTAAA	-16	NA	145693505	145727475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.5	chr3	+	5311	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-119	303	-119	-303	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCTCACTATTTTTC	NA	False	NA	NA	False	TATAAA	-22	NA	145693505	145727172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.6	chr3	+	4941	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-118	672	-118	-672	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGCCTTTCTGTTTTTG	NA	False	NA	NA	False	AATAAA	-28	NA	145693506	145726803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22762.7	chr3	+	4725	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	-99	869	-99	552	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTATAACTTAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	145693525	145726606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ES.22763.1	chr3	-	177	1	Intergenic	novelGene_18700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	145696870	145696693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_145696700_145696900
ES.22764.1	chr3	+	134	1	Intergenic	novelGene_18701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	145751439	145751573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145751400_145751600
ES.22765.1	chr3	-	3778	10	NIC	ENSMUSG00000043020.14	novel	3176	23	NA	NA	13560	-18273	intron_retention	FALSE	canonical	0	0	junction_1	0.314269680527354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTAAGGAATGTGTACT	NA	False	NA	NA	False	AATAAA	-19	NA	145800325	145766808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_145769238_145771085_145771160_145772556_145772686_145774486_145774574_145776413_145776504_145786098_145786224_145786976_145787168_145788713_145788831_145798623_145798824_145799989
ES.22766.1	chr3	+	4642	12	NIC	ENSMUSG00000036853.6	novel	2991	12	NA	NA	8	-208	intron_retention	FALSE	canonical	0	0	junction_1	2.08100420768356	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGTCCTTAATGT	NA	False	NA	NA	False	CATAAA	-20	NA	145823212	145847353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_145823390_145827545_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145845333_145846218
ES.22767.1	chr3	-	159	1	Intergenic	novelGene_18702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTCAGGGACAAGCAG	2116	False	NA	NA	False	NA	NA	NA	145922800	145922641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_145922600_145922800
ES.22768.1	chr3	+	2284	3	FSM	ENSMUSG00000036832.6	ENSMUST00000039164.4	2464	3	-53	233	-53	-233	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTATGCTTTGAGAT	2221	False	NA	NA	False	AATAAA	-8	NA	145926664	145991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_145926903_145946302_145947060_145990419
ES.22768.2	chr3	+	132	1	Intergenic	novelGene_18703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	145958571	145958703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_145958600_145958700
ES.22769.1	chr3	-	308	1	Intergenic	novelGene_18704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	146081897	146081589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_146081600_146081900
ES.2277.1	chr10	-	857	5	FSM	ENSMUSG00000019775.18	ENSMUST00000131996.8	8107	5	30	7220	10	213	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACACCAGAAATTGAG	NA	False	NA	NA	False	AATAAA	-8	NA	5872356	5782882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_5783142_5791271_5791507_5792535_5792626_5812518_5812663_5872227
ES.22770.1	chr3	+	3501	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	-55	0	-55	0	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110341	146145899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.11	chr3	+	6225	13	NNC	ENSMUSG00000036825.13	novel	3232	14	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_1	61.8766694499811	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110396	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.12	chr3	+	3464	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.5859230484473	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110396	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110575_146123364_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138364_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.13	chr3	+	2213	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	0	1233	0	5	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTCAGAGTTGTTTG	NA	False	NA	NA	False	CATAAA	-17	NA	146110396	146144666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.14	chr3	+	3697	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	66.9228919682029	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTTGTGTTGTCCAT	NA	False	NA	18	True	ATTAAA	-20	NA	146110396	146145895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110691_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.17	chr3	+	3211	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	77.2842291221561	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110397	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142921_146143097_146144795
ES.22770.19	chr3	+	3551	1	NIC	ENSMUSG00000036825.13	novel	3232	14	NA	NA	2	-10171	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	146110398	146113949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110400_146113900
ES.22770.2	chr3	+	3497	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8542851003394	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110371	146145899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.20	chr3	+	4166	13	NNC	ENSMUSG00000036825.13	novel	3410	14	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_1	63.4091651279389	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110400	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110592_146123367_146123546_146124029_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.21	chr3	+	3805	13	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-9	2	intron_retention	FALSE	canonical	0	0	junction_1	55.4563767498583	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110409	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.22	chr3	+	3292	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	53.9780801445797	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110412	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146143059_146143097_146144410
ES.22770.23	chr3	+	3463	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8542851003394	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110412	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110582_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.24	chr3	+	3089	14	FSM	ENSMUSG00000036825.13	ENSMUST00000039021.11	3410	14	-6	327	-6	24	multi-exon	FALSE	canonical	3	67	junction_10	37.3226774028969	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTGAAGCATTGACTT	NA	False	NA	NA	False	ATTAAA	-37	NA	146110412	146145561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.26	chr3	+	3569	15	NNC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.7503666596034	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110413	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146135995_146136118_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.27	chr3	+	3812	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	67.098655663409	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110421	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110832_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.29	chr3	+	1928	12	NNC	ENSMUSG00000036825.13	novel	3232	14	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.806676755479	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGCTCAGAGTTGTTT	NA	False	NA	NA	False	CATAAA	-16	NA	146110422	146144665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146144410
ES.22770.3	chr3	+	3619	14	NIC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	45.0928037135147	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGTGTTGTCCATTC	NA	False	NA	20	True	ATTAAA	-22	NA	146110372	146145897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.30	chr3	+	2504	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	26	916	4	322	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTAGTGTGATTTTGG	NA	False	NA	NA	False	NA	NA	NA	146110422	146144983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.31	chr3	+	3414	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.8542851003394	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110422	146145899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138733_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.33	chr3	+	3377	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.4430677895425	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110427	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136829_146138245_146138367_146138764_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.34	chr3	+	3471	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8542851003394	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110429	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110619_146123373_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.35	chr3	+	3791	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	36	-381	-8	381	multi-exon	FALSE	canonical	3	150	junction_1	20.2423190195674	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATGCCTTATTCCAC	NA	False	NA	NA	False	AATACA	-20	NA	146110432	146146280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.36	chr3	+	4069	13	NIC	ENSMUSG00000036825.13	novel	3232	14	NA	NA	-8	4	intron_retention	FALSE	canonical	3	35	junction_1	55.6379666534762	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAAGCCTTGTGTTGTC	NA	False	NA	15	True	ATTAAA	-17	NA	146110432	146145892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146143097_146144410
ES.22770.37	chr3	+	3069	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8542851003394	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATCCCTCTACTAAAGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	146110436	146145536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.38	chr3	+	6599	13	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	56.1101966372126	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCCTCTACTAAAGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	146110438	146145537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142921_146143097_146144410
ES.22770.40	chr3	+	3441	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8542851003394	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110442	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110592_146123367_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.41	chr3	+	3562	14	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.8542851003394	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110475	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110740_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.43	chr3	+	6249	13	NIC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	55	-5	intron_retention	FALSE	canonical	3	35	junction_1	45.3569178847064	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110500	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.44	chr3	+	3107	12	NNC	ENSMUSG00000036825.13	novel	3410	14	NA	NA	-12257	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.1640835379228	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	662	False	NA	13	True	ATTAAA	-15	NA	146124026	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146124200_146124889_146125103_146128653_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.46	chr3	+	3185	8	NNC	ENSMUSG00000036825.13	novel	3410	14	NA	NA	454	1278	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	85.7433284130429	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATGTATTAAATGATA	NA	False	NA	NA	False	AATAAA	-18	NA	146136737	146147177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410_146146527_146146589_146146800_146147004
ES.22770.5	chr3	+	3343	14	NNC	ENSMUSG00000036825.13	novel	3410	14	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.477493804484	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGAAGCCTTGTGTTG	NA	False	NA	13	True	ATTAAA	-15	NA	146110384	146145890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146143059_146143097_146144410
ES.22770.7	chr3	+	3544	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	71.2286129734564	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTGAAGCCTTGTGT	NA	False	NA	11	True	ATTAAA	-13	NA	146110388	146145888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146110540_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ES.22770.8	chr3	+	4161	13	NNC	ENSMUSG00000036825.13	novel	3446	14	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_1	55.9585039709486	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCCTTGTGTTGTCCA	NA	False	NA	17	True	ATTAAA	-19	NA	146110392	146145894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146110566_146123361_146123546_146124029_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ES.22771.1	chr3	-	178	1	Intergenic	novelGene_18705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	6890	False	NA	NA	False	NA	NA	NA	146147007	146146829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_146146800_146147000
ES.22772.1	chr3	+	178	1	Intergenic	novelGene_18706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	2027	False	NA	NA	False	NA	NA	NA	146152297	146152475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_146152300_146152500
ES.22773.1	chr3	+	2889	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	3	0	3	0	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	5957	False	NA	NA	False	AATAAA	-15	NA	146156227	146171604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ES.22773.2	chr3	+	2719	6	FSM	ENSMUSG00000028189.13	ENSMUST00000029840.4	2629	6	-17	-73	-2	-5	multi-exon	FALSE	canonical	1	3	junction_5	9.43186089804128	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACAGTGACTTATTT	5960	False	NA	NA	False	AATAAA	-10	NA	146156230	146171599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146169653
ES.22773.3	chr3	+	2112	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	6	774	-2	-696	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGTTTCCTTTCTCA	5960	False	NA	NA	False	AATAAA	-16	NA	146156230	146170830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ES.22773.4	chr3	+	1310	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	6	1576	-2	-1498	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCTTAGATATCCAGGA	5960	False	NA	NA	False	AATAAA	-33	NA	146156230	146170028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ES.22773.5	chr3	+	2934	8	NNC	ENSMUSG00000028189.13	novel	2892	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.4030937549419	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	5972	False	NA	NA	False	AATAAA	-15	NA	146156242	146171604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146166761_146166822_146169653
ES.22773.6	chr3	+	2681	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	23	188	0	-110	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCCATCATACTGGTA	5977	False	NA	NA	False	AATATA	-18	NA	146156247	146171416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ES.22773.7	chr3	+	2730	6	NIC	ENSMUSG00000028189.13	novel	2892	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	10.6320270880016	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	5977	False	NA	NA	False	AATAAA	-15	NA	146156247	146171604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146156386_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ES.22774.1	chr3	+	710	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	-129	12	-129	12	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGTGAAATATGCTGG	NA	False	NA	14	True	AATAAA	-27	NA	146205432	146211315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146205776_146209014_146209155_146211088
ES.22774.2	chr3	+	567	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1828	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	-3	True	AATAAA	-10	NA	146205551	146211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146205776_146209014_146209148_146211088
ES.22774.3	chr3	+	2438	2	FSM	ENSMUSG00000068523.13	ENSMUST00000118280.2	2419	2	-23	4	-23	-4	multi-exon	FALSE	canonical	3	3656	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	-3	True	AATAAA	-10	NA	146205621	146211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146205776_146209014
ES.22774.4	chr3	+	5676	1	NIC	ENSMUSG00000068523.13	novel	593	3	NA	NA	-22	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	-3	True	AATAAA	-10	NA	146205622	146211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146205600_146211300
ES.22774.5	chr3	+	380	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	70	143	-13	-118	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGCTCGTCAGTCC	NA	False	NA	NA	False	AATACA	-2	NA	146205631	146211184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_146205776_146209014_146209155_146211088
ES.22774.6	chr3	+	620	4	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	54	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1659.60042044932	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	-3	True	AATAAA	-10	NA	146205917	146211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146206102_146206349_146206436_146209014_146209155_146211088
ES.22774.7	chr3	+	3439	2	ISM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	364	29	62	-4	3prime_fragment	FALSE	canonical	3	3573	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGGCCTCCTTACT	NA	False	NA	-3	True	AATAAA	-10	NA	146205925	146211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_146209155_146211088
ES.22774.8	chr3	+	864	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	1735	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTTACTGATGT	NA	False	NA	2	True	AATAAA	-15	NA	146205926	146211303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146206436_146209014_146209155_146211088
ES.22775.1	chr3	-	1654	14	NIC	ENSMUSG00000028188.14	novel	1920	15	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	5.42294053292756	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGGACTGGCCTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	146205480	146162958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146163243_146168939_146169011_146171663_146171752_146173860_146173960_146175379_146175559_146181010_146181137_146181948_146182058_146186882_146186965_146187521_146187616_146193266_146193321_146194401_146194520_146195565_146195673_146199426_146199599_146205409
ES.22775.2	chr3	-	2348	1	Antisense	novelGene_ENSMUSG00000028189.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146167111	146164763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_146164800_146167100
ES.22775.3	chr3	-	2540	4	ISM	ENSMUSG00000028188.14	ENSMUST00000123421.6	742	7	-491	5657	-491	67	intron_retention	FALSE	canonical	1	1	junction_1	4.10960933531265	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATAAATCGAAACGA	NA	False	NA	NA	False	AATAAA	-21	NA	146189771	146181037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_146181137_146181948_146182058_146186882_146186965_146187521
ES.22775.4	chr3	-	2897	4	NNC	ENSMUSG00000028188.14	novel	742	7	NA	NA	-1039	-308	intron_retention	FALSE	canonical	0	0	junction_3	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAACTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	146190319	146181412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146182058_146186882_146186965_146187521_146187616_146188243
ES.22775.5	chr3	-	169	1	Intergenic	novelGene_18707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAATAGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	146181755	146181586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_146181600_146181800
ES.22775.6	chr3	-	161	1	Intergenic	novelGene_18708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	146187858	146187697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_146187700_146187900
ES.22775.7	chr3	-	2833	6	NNC	ENSMUSG00000028188.14	novel	1920	15	NA	NA	-14	-11	intron_retention	FALSE	canonical	0	0	junction_3	8.19756061276768	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAAAGAGAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	146205478	146191176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146193321_146194401_146194520_146195565_146195673_146197916_146198140_146199426_146199599_146205409
ES.22775.8	chr3	-	3918	2	ISM	ENSMUSG00000028188.14	ENSMUST00000197684.2	789	9	-402	15033	-358	-4972	5prime_fragment	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	146205866	146196137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_146199599_146205409
ES.22776.1	chr3	-	2829	1	Genic_Genomic	ENSMUSG00000028187.11	novel	NA	NA	NA	NA	2222	2782	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCGTACTGCTAACC	NA	False	NA	NA	False	AATAAA	-10	NA	146211757	146208928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_146208900_146211800
ES.22776.10	chr3	-	6057	8	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	8	-4	intron_retention	FALSE	canonical	3	514	junction_1	28.4691024782723	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTTAGGTATTAAA	NA	False	NA	-7	True	AATAAA	-21	NA	146227158	146212102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146223562_146225141_146225199_146226923
ES.22776.13	chr3	-	1212	9	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	242.795052461948	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTTAGGTATTAAA	NA	False	NA	-7	True	AATAAA	-21	NA	146227158	146212102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146212331_146212826_146212954_146213268_146213451_146214529_146214582_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.15	chr3	-	1298	10	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	230.797650671656	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATTTTTTAGGTATTA	NA	False	NA	-9	True	AATAAA	-19	NA	146227167	146212104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146214533_146214582_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.16	chr3	-	1113	9	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.225131860015	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATTTTTTAGGTATTA	NA	False	NA	-9	True	AATAAA	-19	NA	146227158	146212104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146212331_146212826_146212954_146213268_146213323_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.19	chr3	-	2055	7	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	0	-11	intron_retention	FALSE	canonical	3	515	junction_1	37.6282990432585	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTGAAAATTTTTTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	146227166	146212109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.2	chr3	-	3304	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	26	-1669	8	1669	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAGTCTGTTTAGCAA	NA	False	NA	NA	False	AATAAA	-10	NA	146227158	146210041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.21	chr3	-	1230	9	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	185.126814643368	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTGAAAATTTTTTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	146227159	146212109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218044_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.22	chr3	-	1359	9	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	5	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	185.127616456865	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTCTGAAAATTTTT	NA	False	NA	-18	True	AATAAA	-10	NA	146226801	146212113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226439
ES.22776.23	chr3	-	2281	8	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	7	-15	intron_retention	FALSE	canonical	3	7	junction_3	196.655920379754	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTCTGAAAATTTTT	NA	False	NA	-18	True	AATAAA	-10	NA	146227159	146212113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146212331_146212826_146212954_146213268_146214582_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.24	chr3	-	1534	8	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	-1	-37	intron_retention	FALSE	canonical	3	514	junction_1	38.3272695588498	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAATAAATATAATT	NA	False	NA	-40	True	NA	NA	NA	146227167	146212135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.26	chr3	-	1544	5	ISM	ENSMUSG00000028187.11	ENSMUST00000196909.2	807	6	4	3176	4	-554	5prime_fragment	FALSE	canonical	2	6	junction_4	255.1597538798	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTACAAGCTTTCAT	NA	False	NA	NA	False	AATAAA	-22	NA	146226802	146217103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226439
ES.22776.27	chr3	-	617	5	FSM	ENSMUSG00000028187.11	ENSMUST00000199079.2	1978	5	115	1246	115	-1246	multi-exon	FALSE	canonical	3	522	junction_4	35.3765459026175	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTTTTCTGTAACATT	NA	False	NA	NA	False	TATAAA	-34	NA	146227051	146217795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.3	chr3	-	4951	6	NNC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	8	1457	intron_retention	FALSE	canonical	3	7	junction_1	229.788946644524	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATAACTACTCCACGACA	NA	False	NA	NA	False	TATAAA	-41	NA	146227158	146210253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146214582_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.4	chr3	-	2794	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	17	-1150	-1	1150	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGATCCTTTGAAAAAGTG	NA	False	NA	NA	False	AATAAA	-33	NA	146227167	146210560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.5	chr3	-	3552	7	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	-1	1147	intron_retention	FALSE	canonical	3	514	junction_1	37.8274591621836	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACGATCCTTTGAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	146227167	146210563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.6	chr3	-	1291	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	3	367	3	21	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCTGTCATTTCAG	NA	False	NA	18	True	ATTAAA	-6	NA	146227181	146212077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.7	chr3	-	5165	8	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	514	junction_1	38.1415195057051	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGGTATTAAAGTCC	NA	False	NA	-3	True	AATAAA	-25	NA	146227159	146212098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ES.22776.8	chr3	-	6514	7	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	514	junction_1	28.2174099134244	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGGTATTAAAGTCC	NA	False	NA	-3	True	AATAAA	-25	NA	146227165	146212098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146212954_146213268_146213980_146217896_146218051_146218570_146223562_146225141_146225199_146226923
ES.22776.9	chr3	-	10433	6	NIC	ENSMUSG00000028187.11	novel	1661	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	514	junction_1	30.6398433416361	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGGTATTAAAGTCC	NA	False	NA	-3	True	AATAAA	-25	NA	146227167	146212098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146212331_146212826_146212954_146213268_146218051_146218570_146223562_146225141_146225199_146226923
ES.22777.1	chr3	+	800	4	NIC	ENSMUSG00000028186.15	novel	2737	8	NA	NA	2497	387	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGTCACCATA	NA	False	NA	NA	False	AATAAA	-7	NA	146318236	146336789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_146318327_146331509_146331634_146333555_146333640_146336287
ES.22778.1	chr3	-	1649	5	NNC	ENSMUSG00000048652.13	novel	1590	4	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.48746859276655	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTCTTTAGTTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	146391239	146350945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146352185_146368425_146368538_146386516_146386603_146390687_146390851_146391190
ES.22779.1	chr3	+	175	1	Intergenic	novelGene_18710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	146488896	146489071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_146488900_146489100
ES.2278.1	chr10	+	164	1	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACTTAAACACACTG	NA	False	NA	NA	False	NA	NA	NA	6011853	6012017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_6011900_6012000
ES.22780.1	chr3	-	4852	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-504	-1	-474	1	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGAGTCTTCTGTCCGA	2194	False	NA	NA	False	ATTAAA	-21	NA	146519219	146435327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.10	chr3	-	4078	10	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	5875	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	50.8252877664575	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTATTGAGTCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	146464450	146435334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146464390
ES.22780.11	chr3	-	4456	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.9225312389927	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTATTGAGTCTTC	2723	False	NA	NA	False	ATTAAA	-14	NA	146518690	146435334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146469753_146469894_146518392
ES.22780.12	chr3	-	4530	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.3352982151344	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTATTGAGTCTTC	2651	False	NA	NA	False	ATTAAA	-14	NA	146518762	146435334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146509764_146509907_146518392
ES.22780.13	chr3	-	4272	10	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	51.2748584699277	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTATTGAGTCTTC	2699	False	NA	NA	False	ATTAAA	-14	NA	146518714	146435334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461459_146463472_146463524_146518392
ES.22780.14	chr3	-	4054	10	FSM	ENSMUSG00000005034.16	ENSMUST00000106137.8	4061	10	292	-285	292	-6	multi-exon	FALSE	canonical	0	0	junction_9	50.8252877664575	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGCTATTGAGTCTTC	1654	False	NA	NA	False	ATTAAA	-14	NA	146475724	146435334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146475688
ES.22780.16	chr3	-	6722	9	NIC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	52	-8	intron_retention	FALSE	canonical	3	142	junction_1	12.4191132936293	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAAAGCTATTGAGTCT	2750	False	NA	NA	False	ATTAAA	-12	NA	146518663	146435336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.17	chr3	-	4247	9	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	53.7748489072726	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAAAGCTATTGAGTCT	2672	False	NA	NA	False	ATTAAA	-12	NA	146518741	146435336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461460_146518392
ES.22780.18	chr3	-	4149	10	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	5814	-11	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_9	49.9083109929883	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAAAAGCTATTGAG	NA	False	NA	NA	False	ATTAAA	-9	NA	146464511	146435339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146464375
ES.22780.2	chr3	-	4319	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.9225312389927	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2750	False	NA	NA	False	ATTAAA	-20	NA	146518663	146435328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146517482_146517507_146518392
ES.22780.20	chr3	-	4203	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	27	117	27	-117	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTTCTTTGTTTAGAG	2725	False	NA	NA	False	NA	NA	NA	146518688	146435445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.21	chr3	-	4136	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-17	228	13	63	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTTCTTTCCTTCTG	2681	False	NA	NA	False	AATACA	-20	NA	146518732	146435556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.22	chr3	-	3423	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-3	-776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.3352982151344	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTATTATAATTTAGTTT	2695	False	NA	NA	False	AATAAA	-18	NA	146518718	146436397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146509764_146509907_146518392
ES.22780.23	chr3	-	3293	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	-17	1071	13	-778	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTATTATAATTTAGT	2681	False	NA	NA	False	AATAAA	-16	NA	146518732	146436399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.25	chr3	-	3132	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	9	1206	9	-913	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTTACTTTTATGT	2707	False	NA	NA	False	AATAAA	-24	NA	146518706	146436534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.26	chr3	-	2356	1	Intergenic	novelGene_18709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	8134	False	NA	NA	False	NA	NA	NA	146469244	146466888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_146466900_146469200
ES.22780.27	chr3	-	1125	2	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-10	-505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTATTTTTCATCA	2688	False	NA	NA	False	AATAAA	-17	NA	146518725	146515777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146516570_146518392
ES.22780.4	chr3	-	4426	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.3307575305206	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2695	False	NA	NA	False	ATTAAA	-20	NA	146518718	146435328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443754_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146509764_146509907_146518392
ES.22780.5	chr3	-	4430	11	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	62.9777738571315	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2695	False	NA	NA	False	ATTAAA	-20	NA	146518718	146435328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146462344_146462425_146463461_146463524_146518392
ES.22780.6	chr3	-	4328	10	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.3480017522651	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2651	False	NA	NA	False	ATTAAA	-20	NA	146518762	146435328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443754_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ES.22780.7	chr3	-	4059	10	NNC	ENSMUSG00000005034.16	novel	4347	10	NA	NA	5518	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	50.5195231788882	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	NA	False	NA	NA	False	ATTAAA	-20	NA	146464807	146435328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146464772
ES.22781.1	chr3	-	591	1	FSM	ENSMUSG00000070343.4	ENSMUST00000084614.5	537	1	-18	-36	-18	36	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATTAAA	NA	False	NA	NA	False	AATAAA	-36	NA	146545120	146544529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_146544500_146545100
ES.22782.1	chr3	+	1436	5	ISM	ENSMUSG00000036745.16	ENSMUST00000038090.12	2265	15	-4	41754	-4	-4	5prime_fragment	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCATGTGTATGTTTT	8916	False	NA	NA	False	ATTAAA	-15	NA	146558117	146604257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_146558345_146599756_146599956_146600118_146600251_146602360_146602483_146603501
ES.22782.2	chr3	+	3166	21	NNC	ENSMUSG00000036745.16	novel	7394	22	NA	NA	3	394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.804673846971554	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGCATTTTTC	8923	False	NA	NA	False	AATGAA	-17	NA	146558124	146690158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_146558345_146599756_146599956_146600118_146600251_146602360_146602483_146603501_146603570_146607078_146607238_146609788_146610006_146615260_146615426_146618984_146619144_146621449_146621545_146635809_146635958_146636148_146636223_146637232_146637369_146640282_146640370_146645730_146645933_146649760_146649964_146650848_146650984_146653332_146653414_146667358_146667520_146673750_146673925_146689929
ES.22783.1	chr3	-	4480	1	Intergenic	novelGene_18711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	147266053	147261573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_147261600_147266100
ES.22784.1	chr3	-	5538	19	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	55549	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	7.33333333333333	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	False	NA	0	True	AATAAA	-19	NA	148604722	148521490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148604642
ES.22784.10	chr3	-	4978	19	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	55543	-328	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	7.33333333333333	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTCGAGCTCTTGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	148604728	148522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148604642
ES.22784.11	chr3	-	5229	20	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	509	-328	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	6.88488649506014	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTCGAGCTCTTGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	148695682	148522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
ES.22784.12	chr3	-	5225	20	FSM	ENSMUSG00000028184.13	ENSMUST00000200543.5	5509	20	-44	328	-44	-328	multi-exon	FALSE	canonical	2	5	junction_19	7.16253719419116	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTCGAGCTCTTGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	148696235	148522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ES.22784.13	chr3	-	4618	18	NIC	ENSMUSG00000028184.13	novel	4592	22	NA	NA	-30118	-328	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	10.939595078632	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGTCGAGCTCTTGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	148571279	148522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_148523565_148528623_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235
ES.22784.14	chr3	-	3983	17	NIC	ENSMUSG00000028184.13	novel	5615	22	NA	NA	-23374	-332	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.82165178317782	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGTGTCGAGCTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	148564535	148522060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_148523565_148526608_148526662_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ES.22784.15	chr3	-	4235	16	ISM	ENSMUSG00000028184.13	ENSMUST00000199750.5	4399	20	95363	-506	-23886	-341	3prime_fragment	FALSE	canonical	1	2	junction_15	8.42905029578593	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGGAGAAAATATTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	148565047	148522069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558299_148564368
ES.22784.16	chr3	-	4844	18	NNC	ENSMUSG00000028184.13	novel	5412	19	NA	NA	55562	-346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.38378193063966	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGTTTGGAGAAAATA	NA	False	NA	NA	False	AATAAA	-41	NA	148604709	148522074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148604642
ES.22784.17	chr3	-	5191	21	NNC	ENSMUSG00000028184.13	novel	5615	22	NA	NA	531	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.73909646733207	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCATTAAAATAATTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	148695660	148522092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148526608_148526662_148528623_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
ES.22784.18	chr3	-	4709	1	Intergenic	novelGene_18712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148641200	148636491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_148636500_148641200
ES.22784.2	chr3	-	4810	17	NIC	ENSMUSG00000028184.13	novel	5615	22	NA	NA	-23632	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.82165178317782	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACGTGCACTTTTATGT	NA	False	NA	-1	True	AATAAA	-18	NA	148564793	148521491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_148523565_148526608_148526662_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368
ES.22784.3	chr3	-	5597	20	NNC	ENSMUSG00000028184.13	novel	5615	22	NA	NA	55571	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.99251797658955	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACGTGCACTTTTATGT	NA	False	NA	-1	True	AATAAA	-18	NA	148604700	148521491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148526608_148526691_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148604642
ES.22784.4	chr3	-	6407	20	NIC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	5.8980253984794	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACGTGCACTTTTATGT	NA	False	NA	-1	True	AATAAA	-18	NA	148695002	148521491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148694225
ES.22784.5	chr3	-	6474	20	NIC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	7.74775456703585	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACGTGCACTTTTATGT	NA	False	NA	-1	True	AATAAA	-18	NA	148695102	148521491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_148523565_148528623_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148694225
ES.22784.6	chr3	-	5626	21	NNC	ENSMUSG00000028184.13	novel	4541	22	NA	NA	517	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	10.6811750289938	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACGTGCACTTTTATG	NA	False	NA	-2	True	AATAAA	-17	NA	148695674	148521492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558299_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
ES.22784.7	chr3	-	5899	22	NNC	ENSMUSG00000028184.13	novel	5615	22	NA	NA	524	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.2588589458215	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACGTGCACTTTTATG	NA	False	NA	-2	True	AATAAA	-17	NA	148695667	148521492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148526608_148526691_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
ES.22784.8	chr3	-	5777	20	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	525	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	6.88488649506014	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACGTGCACTTTTATG	NA	False	NA	-2	True	AATAAA	-17	NA	148695666	148521492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148695518
ES.22784.9	chr3	-	6355	19	NNC	ENSMUSG00000028184.13	novel	5509	20	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.85026790385814	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAACGTGCACTTTTATG	NA	False	NA	-2	True	AATAAA	-17	NA	148695101	148521492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539537_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148596047_148596262_148660198_148660372_148694225
ES.22785.1	chr3	-	333	1	FSM	ENSMUSG00000047676.7	ENSMUST00000057740.7	885	1	618	-66	618	66	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-13	NA	149778561	149778228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_149778200_149778600
ES.22786.1	chr3	-	177	1	Intergenic	novelGene_18713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGTTCAGTGC	NA	False	NA	NA	False	NA	NA	NA	149836697	149836520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_149836500_149836700
ES.22787.1	chr3	+	138	1	Intergenic	novelGene_18714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	151166469	151166607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_151166500_151166600
ES.22788.1	chr3	-	1963	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	251	-618	-229	312	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCATTTGTGTTTGATT	NA	False	NA	NA	False	TATAAA	-11	NA	151871616	151798857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ES.22788.2	chr3	-	1479	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	113	4	113	-2	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTTTGTGGGTATTTT	NA	False	NA	NA	False	CATAAA	-13	NA	151871754	151799479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ES.22788.3	chr3	-	1415	6	NNC	ENSMUSG00000039131.16	novel	1596	6	NA	NA	346	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	12.1885191881541	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTTTGTGGGTATTTT	NA	False	NA	NA	False	CATAAA	-13	NA	151871041	151799479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151870635
ES.22788.4	chr3	-	1227	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	260	109	-220	-66	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTTCAAAAGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	151871607	151799584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ES.22788.5	chr3	-	2211	4	NNC	ENSMUSG00000039131.16	novel	525	2	NA	NA	339	1900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.0277457017791	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTCTCTAGAACTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	151871048	151831626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151833058_151833672_151833854_151843209_151843396_151870635
ES.22789.1	chr3	-	3766	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	-1330	28	-1330	-1	multi-exon	FALSE	canonical	3	15	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTATAGTCTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	151900812	151889619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151891018_151892051_151892621_151899013
ES.22789.2	chr3	-	2452	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	0	7	0	-7	multi-exon	TRUE	canonical	3	8	junction_3	4.18993502999218	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGAGTCCTATAGTCTT	NA	False	NA	NA	False	AAAACA	-42	NA	151915720	151889625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ES.22789.3	chr3	-	2427	4	NIC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	-30	-108	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	6.48074069840786	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCTTCTGTTTTATA	NA	False	NA	NA	False	AATATA	-17	NA	151915750	151889726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151891018_151892051_151892621_151899013_151899302_151915471
ES.22789.4	chr3	-	2383	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	-32	108	-32	-108	multi-exon	FALSE	canonical	3	8	junction_3	4.18993502999218	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCTTCTGTTTTATA	NA	False	NA	NA	False	AATATA	-17	NA	151915752	151889726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ES.22789.5	chr3	-	4094	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	-1771	141	-1771	-114	multi-exon	FALSE	canonical	3	15	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTACTGTCTTCTGT	NA	False	NA	NA	False	AATATA	-11	NA	151901253	151889732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151891018_151892051_151892621_151899013
ES.22789.6	chr3	-	1859	5	NNC	ENSMUSG00000028035.14	novel	2459	4	NA	NA	21	70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.07774721070176	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGGCAACGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	151915895	151890647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151891018_151892051_151892621_151899013_151899302_151900342_151900551_151915471
ES.22789.7	chr3	-	2113	1	FSM	ENSMUSG00000028035.14	ENSMUST00000196291.2	4913	1	-3	2803	-3	-2803	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAACGTTTGTACAGA	NA	False	NA	NA	False	NA	NA	NA	151915942	151913829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151913800_151915900
ES.2279.1	chr10	-	171	1	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGACAGTAACGATTGC	NA	False	NA	NA	False	NA	NA	NA	6020686	6020515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_6020500_6020700
ES.22790.1	chr3	+	2553	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	449.059002248034	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916037	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.104	chr3	+	2305	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	411.559300917553	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGGGTAAAGGATTCA	NA	False	NA	42	True	AATAAA	-32	NA	151916119	151938425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916228_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.105	chr3	+	2780	19	ISM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	1	3	1	-2	intron_retention	FALSE	canonical	1	416	junction_13	302.218877636722	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTCGGTAAGTTGGA	NA	False	NA	23	True	AATAAA	-13	NA	151916119	151938406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513
ES.22790.106	chr3	+	3262	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	1	783	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCTGTCTTGCCATTG	NA	False	NA	NA	False	AATATA	-17	NA	151916119	151939209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.109	chr3	+	3744	23	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_20	500.054990777667	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916119	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.11	chr3	+	2192	19	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-15	-241	intron_retention	FALSE	canonical	2	280	junction_13	328.282817132867	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAGAAGCCACCATCAT	NA	False	NA	NA	False	AATAAA	-29	NA	151916094	151937904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151926947_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513
ES.22790.110	chr3	+	2393	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	473.917556559696	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916119	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919620_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927875_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.111	chr3	+	2888	19	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	1	0	intron_retention	FALSE	canonical	1	416	junction_12	267.387734605168	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916119	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.112	chr3	+	5499	18	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	1	-3	intron_retention	FALSE	canonical	1	416	junction_13	313.934888451174	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATGTGGGTAAAGGATT	NA	False	NA	40	True	AATAAA	-30	NA	151916119	151938423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931846_151933807_151933883_151937513
ES.22790.114	chr3	+	4937	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	3	4	intron_retention	FALSE	canonical	1	46	junction_20	440.545355213286	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	False	NA	15	True	AATAAA	-20	NA	151916121	151942467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.116	chr3	+	5117	19	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-2	0	intron_retention	FALSE	canonical	1	416	junction_13	307.197346792812	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916126	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.117	chr3	+	2879	21	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	522.015256003117	1022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151916126	151938664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151929625_151929847_151931711_151931855_151933810_151933883_151937513_151937660_151938031
ES.22790.118	chr3	+	7472	15	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_14	402.907190406963	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916127	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927882_151928465_151928618_151928922_151929801_151941406
ES.22790.119	chr3	+	4094	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	1	-1	intron_retention	FALSE	canonical	1	19	junction_19	504.614196717002	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916129	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.12	chr3	+	2438	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGGGTAAAGGATTC	NA	False	NA	41	True	AATAAA	-31	NA	151916095	151938424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.122	chr3	+	3501	17	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	5	4	intron_retention	FALSE	non_canonical	0	0	junction_16	424.236810158843	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	False	NA	15	True	AATAAA	-20	NA	151916139	151942467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929789_151941406
ES.22790.125	chr3	+	5917	20	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	6	1	intron_retention	FALSE	canonical	1	87	junction_19	371.190008163831	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916140	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151940208_151941104
ES.22790.126	chr3	+	4439	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	82	2002	6	-595	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACTGAAAAACATCCAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	151916140	151940461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.127	chr3	+	6810	19	ISM	ENSMUSG00000028034.16	ENSMUST00000200452.5	4525	22	-14	0	-7	0	intron_retention	FALSE	canonical	1	416	junction_13	269.953956979498	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916143	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513
ES.22790.13	chr3	+	8678	19	NIC	ENSMUSG00000028034.16	novel	4846	20	NA	NA	-14	0	intron_retention	FALSE	canonical	1	87	junction_18	399.281550003052	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916095	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151940208_151941104
ES.22790.131	chr3	+	2815	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_3	452.520531053488	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916147	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513
ES.22790.133	chr3	+	2341	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	507.173117809463	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916149	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938923_151938986_151940160_151940208_151942231
ES.22790.135	chr3	+	2356	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	407.707304984098	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCGGTAAGTTGGAT	NA	False	NA	24	True	AATAAA	-14	NA	151916149	151938407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937649_151938031
ES.22790.136	chr3	+	2701	21	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-1	240	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	463.709486100942	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTATACTTCCATT	NA	False	NA	25	True	ATTAAA	-21	NA	151916149	151938666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.137	chr3	+	2769	20	FSM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	36	-253	-1	236	multi-exon	FALSE	canonical	1	74	junction_19	393.500738277491	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATCTTTAGTATACTTC	NA	False	NA	21	True	ATTAAA	-17	NA	151916154	151938662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ES.22790.14	chr3	+	2437	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	412.030826106555	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916095	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928908_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.140	chr3	+	2354	20	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	412.030826106555	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916157	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928928_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.143	chr3	+	5517	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	0	-1	intron_retention	FALSE	canonical	1	87	junction_20	391.794410373604	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916157	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031_151940208_151941104
ES.22790.146	chr3	+	3608	23	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_20	509.158974751745	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916157	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151926947_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.149	chr3	+	4948	22	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_3	542.243801380942	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916159	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.151	chr3	+	7653	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	13	1	intron_retention	FALSE	canonical	0	0	junction_3	549.042664553494	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916170	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931846_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.153	chr3	+	9339	20	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	29	0	intron_retention	FALSE	non_canonical	0	0	junction_16	523.889787737164	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916186	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151932506_151932704_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.156	chr3	+	4260	18	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	2911	-1	intron_retention	FALSE	canonical	1	416	junction_11	317.384335796517	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCGGTAAGTTGGAT	NA	False	NA	24	True	AATAAA	-14	NA	151919068	151938407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.157	chr3	+	2901	18	ISM	ENSMUSG00000028034.16	ENSMUST00000200452.5	4525	22	5069	3254	-1841	783	internal_fragment	FALSE	canonical	1	416	junction_11	284.289827257946	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCTGTCTTGCCATTG	NA	False	NA	NA	False	AATATA	-17	NA	151921226	151939209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.158	chr3	+	4923	14	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	552	238	intron_retention	FALSE	canonical	1	416	junction_8	347.463420236385	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151923619	151938664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.161	chr3	+	4148	15	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1660	0	intron_retention	FALSE	canonical	1	19	junction_13	533.463806319661	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151925339	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031_151939340_151940160_151940208_151941104
ES.22790.162	chr3	+	5212	13	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1637	-1	intron_retention	FALSE	canonical	1	46	junction_12	476.290935831825	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151925362	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151941242_151942243
ES.22790.164	chr3	+	2275	9	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-68	3	intron_retention	FALSE	canonical	1	14	junction_7	577.574440548575	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGTGTCTTTTA	NA	False	NA	14	True	AATAAA	-19	NA	151926931	151942466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151940160_151940208_151941104
ES.22790.165	chr3	+	1144	7	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-45	-1	combination_of_known_splicesites	FALSE	canonical	1	10	junction_5	576.241389427112	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCGGTAAGTTGGAT	NA	False	NA	24	True	AATAAA	-14	NA	151926954	151938407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151937513_151937660_151938031
ES.22790.166	chr3	+	3963	7	NNC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	197	-1	intron_retention	FALSE	canonical	3	26	junction_6	549.045434266499	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151927718	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151939244
ES.22790.167	chr3	+	5178	7	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	197	1	intron_retention	FALSE	canonical	3	527	junction_4	340.020424223147	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151927718	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.168	chr3	+	944	8	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-417	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	639.87313793678	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151928517	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151940160_151940208_151941104_151941242_151942243
ES.22790.169	chr3	+	2954	1	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-626	-1192	mono-exon	FALSE	NA	NA	NA	NA	NA	989	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTACCT	NA	False	NA	NA	False	NA	NA	NA	151929738	151932692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151929700_151932700
ES.22790.170	chr3	+	2839	7	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-626	3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	565.391137964585	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGTGTCTTTTA	NA	False	NA	14	True	AATAAA	-19	NA	151929738	151942466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151931855_151933807_151933883_151937513_151937660_151939244_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.171	chr3	+	5972	3	ISM	ENSMUSG00000028034.16	ENSMUST00000199876.5	4846	20	13696	-2	-513	2	intron_retention	FALSE	canonical	3	879	junction_1	304.5	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	151929851	151941407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151931855_151933807_151933883_151937513
ES.22790.172	chr3	+	3565	6	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-540	0	intron_retention	FALSE	canonical	3	16	junction_2	578.960931324386	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151930967	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151933883_151937513_151937660_151939239_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.173	chr3	+	3990	5	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-517	0	intron_retention	FALSE	canonical	3	46	junction_4	598.742432102486	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151930990	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151931855_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.174	chr3	+	4906	2	NNC	ENSMUSG00000028034.16	novel	665	3	NA	NA	46	-289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTTTTACATCTTTCA	NA	False	NA	NA	False	NA	NA	NA	151931553	151936658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151932516_151932714
ES.22790.175	chr3	+	4918	2	NNC	ENSMUSG00000028034.16	novel	665	3	NA	NA	339	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTCTTCTTTCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	151931846	151936963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151932516_151932714
ES.22790.176	chr3	+	176	2	Intergenic	novelGene_18715	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	151932516	152094019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_151932608_152093934
ES.22790.177	chr3	+	5214	2	ISM	ENSMUSG00000028034.16	ENSMUST00000200207.2	665	3	140	-4317	140	-1	intron_retention	FALSE	canonical	3	1488	junction_1	0	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151933617	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151933883_151937513
ES.22790.178	chr3	+	7209	2	Genic_Genomic	ENSMUSG00000028034.16	novel	6523	20	NA	NA	815	1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151934292	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_151935586_151936548
ES.22790.179	chr3	+	3682	1	ISM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	22021	702	4602	290	mono-exon	FALSE	NA	NA	NA	NA	NA	1023	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTAAAGTGTTTTCTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	151938079	151941761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151938100_151941800
ES.22790.18	chr3	+	6491	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	37	-5	-14	5	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTGTGTCTTTTAAT	NA	False	NA	16	True	AATAAA	-21	NA	151916095	151942468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.180	chr3	+	4324	1	Antisense	novelGene_ENSMUSG00000039103.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTTTAAATTGATTC	NA	False	NA	NA	False	NA	NA	NA	151947236	151951560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_151947200_151951600
ES.22790.181	chr3	+	187	1	Intergenic	novelGene_18716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	2912	False	NA	NA	False	NA	NA	NA	151991355	151991542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_151991400_151991500
ES.22790.182	chr3	+	4252	3	Antisense	novelGene_ENSMUSG00000054942.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGCCATATCTCTAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	152024382	152038049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_152026737_152027104_152028775_152037821
ES.22790.183	chr3	+	4136	24	NNC	ENSMUSG00000025437.16	novel	923	5	NA	NA	-6459	5	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	108.096907443579	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152045655	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152046063_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.184	chr3	+	4155	24	NNC	ENSMUSG00000025437.16	novel	821	6	NA	NA	-6458	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	143.638527091544	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152045656	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152046063_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067535_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.186	chr3	+	3724	20	NNC	ENSMUSG00000025437.16	novel	923	5	NA	NA	-6454	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.112635893569	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152045660	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152046063_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.187	chr3	+	4072	24	NNC	ENSMUSG00000025437.16	novel	821	6	NA	NA	-6388	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_22	141.577675447986	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152045726	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152046063_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095469_152097286_152097356_152097845
ES.22790.188	chr3	+	4481	25	NNC	ENSMUSG00000025437.16	novel	821	6	NA	NA	-6385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.512104212377	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTTTCTAACTCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	152045729	152099254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152046063_152061985_152062102_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.189	chr3	+	3945	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	-32	270	-21	14	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTGATAGACTTT	NA	False	NA	NA	False	AATAAA	-31	NA	152052093	152098984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.19	chr3	+	4222	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-13	-987	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	396.655791807601	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCACAAATTGGAGGCT	NA	False	NA	NA	False	ATTAAA	-29	NA	151916096	151940069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ES.22790.191	chr3	+	3903	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	-10	-7	-10	7	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTGAATTTATTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	152052104	152098977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.192	chr3	+	4043	21	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	1	7654	1	1425	5prime_fragment	FALSE	canonical	3	273	junction_13	65.1907010239957	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGTGTGTTTTGTGTA	NA	False	NA	NA	False	TATAAA	-19	NA	152052115	152091316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.193	chr3	+	5465	22	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	1	-1	intron_retention	FALSE	canonical	3	245	junction_11	66.2334564121436	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052115	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.194	chr3	+	5151	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	4	-131	intron_retention	FALSE	canonical	3	273	junction_12	62.2008377345196	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGTGGTTGGCATCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	152052118	152099118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.195	chr3	+	3709	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	110.220815181043	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052121	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.197	chr3	+	5560	21	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	414	junction_13	43.6777689448534	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052122	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.198	chr3	+	3896	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	116.622571557128	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052122	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097851
ES.22790.199	chr3	+	3642	19	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-3	-1237	intron_retention	FALSE	canonical	3	245	junction_12	72.1358671766919	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	152052122	152088654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547
ES.22790.2	chr3	+	6542	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-21	4	intron_retention	FALSE	canonical	1	416	junction_13	332.523108563197	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	False	NA	15	True	AATAAA	-20	NA	151916037	151942467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.20	chr3	+	2458	20	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	410.270547855526	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916096	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926298_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.200	chr3	+	6078	22	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-3	5	intron_retention	FALSE	canonical	3	273	junction_12	63.6414631169366	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052122	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.201	chr3	+	4083	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	142.077584194536	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAACTGAATGTTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	152052122	152098968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062169_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.205	chr3	+	4135	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	141.19981901153	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAATTTATTTGATAGA	NA	False	NA	NA	False	AATAAA	-27	NA	152052127	152098980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152062504_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.206	chr3	+	4998	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	3	5	intron_retention	FALSE	canonical	3	273	junction_12	62.2008377345196	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052128	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.207	chr3	+	3746	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	6	431	6	-147	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTATTCACTGCTGTTT	NA	False	NA	NA	False	CATAAA	-15	NA	152052131	152098823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.208	chr3	+	4385	26	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.549992262457	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052132	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152054211_152054590_152062592_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.209	chr3	+	3357	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	7	819	7	291	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTGGTCAGCACATTG	NA	False	NA	NA	False	AATGAA	-17	NA	152052132	152098435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.210	chr3	+	3855	24	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_18	112.683205163405	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATAAACTGAATGTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152052132	152098966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087360_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.211	chr3	+	3993	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.11033403753	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATAAACTGAATGTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152052133	152098966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061971_152062102_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.212	chr3	+	4175	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	8	0	8	0	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTTTCTAACTCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	152052133	152099254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.213	chr3	+	3656	21	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	115.323284726026	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052133	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152085131_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.214	chr3	+	4122	26	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	159.435925688033	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052134	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062102_152062592_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.215	chr3	+	3569	21	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	20	8109	9	970	5prime_fragment	FALSE	canonical	3	273	junction_13	65.1907010239957	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATTAAGGACTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	152052134	152090861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.216	chr3	+	3853	24	FSM	ENSMUSG00000025437.16	ENSMUST00000026507.13	4153	24	21	279	10	0	multi-exon	FALSE	canonical	3	5	junction_22	112.964370313398	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052135	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095469_152097286_152097356_152097845
ES.22790.217	chr3	+	4112	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	144.532940305431	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052135	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152066553_152066796_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.22	chr3	+	3483	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	38	3002	-13	1035	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGCTTCTTAACAT	NA	False	NA	NA	False	AATACA	-17	NA	151916096	151939461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.222	chr3	+	5110	22	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	11	0	intron_retention	FALSE	canonical	3	414	junction_14	44.6200894323665	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052136	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.223	chr3	+	3944	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	144.364892623595	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052136	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152070021_152070097_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.224	chr3	+	3675	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	22	189	11	-189	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATTTTTTAATGAAA	NA	False	NA	NA	False	GATAAA	-16	NA	152052136	152098781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.225	chr3	+	3754	21	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	11	8230	11	1133	5prime_fragment	FALSE	canonical	3	245	junction_13	69.5534866128219	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGATTTCACTGTGTT	NA	False	NA	NA	False	ATTAAA	-29	NA	152052136	152091024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.226	chr3	+	3898	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	116.500647020279	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAACTGAATGTTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	152052136	152098968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072365_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.227	chr3	+	3002	19	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	24	10821	-10	-1742	5prime_fragment	FALSE	canonical	3	273	junction_13	61.0266335299597	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACACACAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	152052138	152088149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351
ES.22790.228	chr3	+	4007	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	141.698231777566	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052138	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062102_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.229	chr3	+	3707	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	116.242266249458	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052139	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.23	chr3	+	3456	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-13	3	intron_retention	FALSE	canonical	1	14	junction_19	474.543201405309	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGTGTCTTTTA	NA	False	NA	14	True	AATAAA	-19	NA	151916096	151942466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151940160_151940208_151941104
ES.22790.230	chr3	+	4389	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_9	168.665259476435	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052141	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152074409_152074489_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087360_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.231	chr3	+	3963	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	145.788945625746	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052141	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152070021_152070097_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.232	chr3	+	3871	24	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	114.594806838064	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052142	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097831
ES.22790.233	chr3	+	4142	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	28	-284	-6	0	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTTTCTAACTCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	152052142	152099254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.234	chr3	+	4267	26	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	159.435925688033	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052143	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062169_152062504_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.235	chr3	+	3716	21	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	34	7948	0	1131	5prime_fragment	FALSE	canonical	3	273	junction_13	65.1907010239957	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGGATTTCACTGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	152052148	152091022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.237	chr3	+	3446	21	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	35	8217	1	862	5prime_fragment	FALSE	canonical	3	273	junction_13	65.1907010239957	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGCTGTCCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	152052149	152090753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.238	chr3	+	4084	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	139.755441158237	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052149	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152062504_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.239	chr3	+	6167	18	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-1	973	intron_retention	FALSE	canonical	1	1	junction_15	123.559408122733	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGGACTTTAAGATGT	NA	False	NA	NA	False	NA	NA	NA	152052150	152090864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152081913_152084480_152084527_152085072_152085254_152086150_152086387_152087351_152087522_152088547_152088630_152089752
ES.22790.24	chr3	+	5948	19	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-13	783	intron_retention	FALSE	canonical	1	416	junction_13	307.197346792812	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCTGTCTTGCCATTG	NA	False	NA	NA	False	AATATA	-17	NA	151916096	151939209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.240	chr3	+	4022	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	25	136	-1	-131	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGTGGTTGGCATCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	152052150	152099118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.241	chr3	+	3866	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.290641194634	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052150	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063830_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.244	chr3	+	3644	22	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	150.074131341678	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAATGTTGAATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	152052151	152098972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.245	chr3	+	4030	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.644640603741	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAACTGAATGTTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	152052151	152098968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062169_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.246	chr3	+	3718	23	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	118.36098307318	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAAACTGAATGTTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	152052151	152098968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.247	chr3	+	3866	24	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	5	junction_22	115.007536532861	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052151	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095469_152097286_152097356_152097845
ES.22790.248	chr3	+	3471	20	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	123.367792346162	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052151	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.252	chr3	+	3823	24	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	114.267586328951	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052152	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079112_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.253	chr3	+	8375	19	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	1	5	intron_retention	FALSE	canonical	3	414	junction_11	45.0006858658294	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052152	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.255	chr3	+	5525	17	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	1	-1742	intron_retention	FALSE	canonical	3	273	junction_11	63.0056731076655	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACACACAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	152052152	152088149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351
ES.22790.256	chr3	+	6552	22	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	1	-1	intron_retention	FALSE	canonical	3	273	junction_11	63.2791390041503	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052152	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.257	chr3	+	3995	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	39	-148	2	-131	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGTGGTTGGCATCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	152052153	152099118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.258	chr3	+	4303	22	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	2	290	intron_retention	FALSE	canonical	3	7	junction_4	120.838585389026	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGGTCAGCACATT	NA	False	NA	NA	False	AATGAA	-16	NA	152052153	152098434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.26	chr3	+	6848	19	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-13	0	intron_retention	FALSE	canonical	1	416	junction_13	307.120884432044	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916096	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513
ES.22790.260	chr3	+	4024	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	142.077584194536	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052153	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062140_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.261	chr3	+	4997	23	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	2	5	intron_retention	FALSE	canonical	3	245	junction_12	66.4868252654937	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052153	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.262	chr3	+	3948	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	144.55203191431	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052153	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084065_152084168_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.263	chr3	+	3847	21	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	28	8120	2	1243	5prime_fragment	FALSE	canonical	3	245	junction_13	69.5534866128219	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATCATGGTATA	NA	False	NA	NA	False	NA	NA	NA	152052153	152091134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.264	chr3	+	3309	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	40	537	3	289	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGTGGTCAGCACAT	NA	False	NA	NA	False	AATGAA	-15	NA	152052154	152098433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.265	chr3	+	3700	23	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	114.969713942268	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052154	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.266	chr3	+	3956	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	162.043027336363	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052154	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062102_152063476_152063609_152063782_152063837_152064277_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.268	chr3	+	5130	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	3	-1	intron_retention	FALSE	canonical	2	8	junction_1	143.932246190295	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052154	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152062592_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.269	chr3	+	3879	24	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.290641194634	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGAATGTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	152052154	152098971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063845_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.271	chr3	+	3818	21	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	41	7839	4	1240	5prime_fragment	FALSE	canonical	3	273	junction_13	65.1907010239957	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTTGAATCATGGT	NA	False	NA	NA	False	NA	NA	NA	152052155	152091131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.274	chr3	+	4621	25	NNC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	162.563016627399	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGAATTTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	152052157	152098975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069612_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.276	chr3	+	4589	25	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	137.613583137308	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052158	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152061985_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.277	chr3	+	3439	20	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	121.160135330693	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152052158	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.279	chr3	+	4438	26	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.549992262457	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTATAAACTGAATGT	NA	False	NA	NA	False	AATAAA	-10	NA	152052161	152098963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152054211_152054590_152062504_152062733_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ES.22790.28	chr3	+	3559	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-12	1	intron_retention	FALSE	canonical	1	16	junction_19	494.995393826344	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916097	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151939239_151939340_151940160_151940208_151941104
ES.22790.280	chr3	+	3827	24	NNC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	113.823828323159	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATAAACTGAATGTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152052163	152098966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095475_152097286_152097356_152097845
ES.22790.281	chr3	+	2778	20	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	13	338	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	125.524097961208	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTGAGTAGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	152052164	152090229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.284	chr3	+	2922	13	ISM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	20249	8236	462	1127	internal_fragment	FALSE	canonical	3	245	junction_5	79.3443182170805	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAGACAGGATTTCAC	NA	False	NA	NA	False	ATTAAA	-23	NA	152072374	152091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752
ES.22790.285	chr3	+	10175	4	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	-727	-1237	intron_retention	FALSE	canonical	3	414	junction_3	35.2357142052713	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATAAAAAATCAT	NA	False	NA	NA	False	NA	NA	NA	152073339	152088654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152074288_152075913_152076055_152079022_152084527_152085072
ES.22790.286	chr3	+	5936	3	ISM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	34230	4541	-1340	-3715	internal_fragment	FALSE	canonical	3	481	junction_2	59	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCACTGGGGATAT	NA	False	NA	NA	False	NA	NA	NA	152086344	152094429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152087522_152088547_152088630_152089752
ES.22790.287	chr3	+	5197	1	FSM	ENSMUSG00000104546.2	ENSMUST00000199418.2	1778	1	-2664	-755	-2664	755	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGCACTGGGGATAT	NA	False	NA	NA	False	NA	NA	NA	152089232	152094429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152089200_152094400
ES.22790.288	chr3	+	3519	3	ISM	ENSMUSG00000025437.16	ENSMUST00000197325.2	780	6	5735	-1090	5247	-15	3prime_fragment	FALSE	canonical	3	494	junction_2	17	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTGCATTTAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	152093419	152099234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152095481_152097286_152097356_152097845
ES.22790.289	chr3	+	4954	2	NIC	ENSMUSG00000025437.16	novel	780	6	NA	NA	5353	-1	intron_retention	FALSE	canonical	3	494	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTGAATGTTGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	152093525	152098969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152097356_152097845
ES.22790.29	chr3	+	2127	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-10	-31	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATGAAGATCTTAATT	NA	False	NA	NA	False	AATATA	-13	NA	151916099	151938114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.290	chr3	+	3216	1	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7046	290	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGGTCAGCACATT	NA	False	NA	NA	False	AATGAA	-16	NA	152095218	152098434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152095200_152098400
ES.22790.291	chr3	+	3511	1	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	7287	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152095459	152098970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152095500_152099000
ES.22790.3	chr3	+	2728	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	-96	-258	1	240	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTATACTTCCATT	NA	False	NA	25	True	ATTAAA	-21	NA	151916059	151938666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.30	chr3	+	2497	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGGGTAAAGGATTCA	NA	False	NA	42	True	AATAAA	-32	NA	151916100	151938425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.33	chr3	+	3602	23	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	570.407323289954	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916102	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151939244_151939340_151940160_151940208_151941104
ES.22790.34	chr3	+	2627	21	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	497.790967676192	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916102	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ES.22790.35	chr3	+	3288	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-7	783	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	449.059002248034	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCTGTCTTGCCATTG	NA	False	NA	NA	False	AATATA	-17	NA	151916102	151939209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.36	chr3	+	5909	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	500.649325875907	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916105	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151941242_151942243
ES.22790.37	chr3	+	6529	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_3	466.001960832784	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916107	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.4	chr3	+	2444	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	27	4052	-24	2	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGTAAGTTGGATATGT	NA	False	NA	28	True	AATAAA	-18	NA	151916085	151938411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.40	chr3	+	5007	22	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	532.261512285378	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916109	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.41	chr3	+	2369	19	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	442.69004079855	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916112	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.42	chr3	+	2397	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	412.030826106555	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916112	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928610_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.44	chr3	+	4340	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	435.154323566433	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916112	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927047_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151940160
ES.22790.45	chr3	+	2434	22	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	14	junction_19	515.333962562649	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916112	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151940160_151940208_151941104_151941242_151942243
ES.22790.46	chr3	+	5576	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	3	1	intron_retention	FALSE	canonical	1	87	junction_20	388.64268936904	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916112	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031_151940208_151941104
ES.22790.47	chr3	+	4051	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	4	-1001	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTCAGTATCATAATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	151916113	151940055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.48	chr3	+	4298	23	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	579.003447084331	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	False	NA	15	True	AATAAA	-20	NA	151916113	151942467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151932500_151932701_151933883_151937513_151937660_151939239_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.50	chr3	+	5467	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-4	2	intron_retention	FALSE	canonical	1	46	junction_20	374.809855126569	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTGTTTGTGTCTTTT	NA	False	NA	13	True	AATAAA	-18	NA	151916114	151942465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031_151941242_151942243
ES.22790.51	chr3	+	2542	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	396.655791807601	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916116	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ES.22790.54	chr3	+	4452	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	-597	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACTGAAAAACATCCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	151916116	151940459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.55	chr3	+	3502	17	NNC	ENSMUSG00000028034.16	novel	3163	16	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	402.658543115318	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916116	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929778_151941409
ES.22790.57	chr3	+	3475	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-2	1056	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATACATAGTTCTGTA	NA	False	NA	NA	False	AATACA	-38	NA	151916116	151939482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.59	chr3	+	2607	21	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	520.989661605679	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916117	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ES.22790.6	chr3	+	3563	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-23	0	intron_retention	FALSE	canonical	1	16	junction_19	517.690558866229	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916086	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151939239_151939340_151940160_151940208_151941104
ES.22790.60	chr3	+	2668	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	412.030826106555	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATCTTTAGTATACTTC	NA	False	NA	21	True	ATTAAA	-17	NA	151916117	151938662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928908_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.64	chr3	+	2558	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	373.246081183867	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGATATGTGGGTAA	NA	False	NA	34	True	AATAAA	-24	NA	151916117	151938417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ES.22790.68	chr3	+	2298	19	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-1	344	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	471.470306594169	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGACTGGAAGTTAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	151916117	151934228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807
ES.22790.69	chr3	+	4927	21	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	46	junction_20	457.397737204722	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916117	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151940208_151941104_151941242_151942243
ES.22790.7	chr3	+	6080	18	NNC	ENSMUSG00000028034.16	novel	4846	20	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	414.85874529376	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916087	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931792_151938163
ES.22790.71	chr3	+	6833	21	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	19	junction_18	510.313442895638	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916117	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.72	chr3	+	5376	19	NIC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-1	232	intron_retention	FALSE	canonical	1	416	junction_13	307.197346792812	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATGATCTTTAGTATA	NA	False	NA	17	True	ATTAAA	-13	NA	151916117	151938658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.73	chr3	+	3211	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	59	3253	-1	784	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTGTCTTGCCATTGT	NA	False	NA	NA	False	AATATA	-18	NA	151916117	151939210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.74	chr3	+	5112	19	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	416	junction_13	312.089552675012	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTCGGTAAGTTGGA	NA	False	NA	23	True	AATAAA	-13	NA	151916117	151938406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.75	chr3	+	2252	20	NIC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	385.157599861799	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916117	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151942243
ES.22790.76	chr3	+	2599	24	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	583.330441976811	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916117	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151939239_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.77	chr3	+	6529	21	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_3	506.819718933666	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916117	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937512_151937660_151938031
ES.22790.79	chr3	+	4987	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	59	1477	-1	-70	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATATCAGTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	151916117	151940986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.8	chr3	+	2593	20	NNC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	471.241191310577	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916089	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926310_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ES.22790.80	chr3	+	2836	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	469.425540368372	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916117	151938409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513
ES.22790.81	chr3	+	5237	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	1	intron_retention	FALSE	canonical	1	19	junction_19	545.658390721777	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916117	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931846_151933807_151933883_151937513_151937660_151939244_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.82	chr3	+	2325	19	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_17	388.370992451519	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151937513_151937660_151938031
ES.22790.84	chr3	+	3204	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	786	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTTGCCATTGTCT	NA	False	NA	NA	False	AATATA	-20	NA	151916117	151939212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.85	chr3	+	2656	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	238	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	305.324648979145	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTAGTATACTTCCA	NA	False	NA	23	True	ATTAAA	-19	NA	151916117	151938664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.87	chr3	+	9179	19	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	1	intron_retention	FALSE	canonical	1	416	junction_13	275.06872317502	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	False	NA	12	True	AATAAA	-17	NA	151916117	151942464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.88	chr3	+	4571	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	506.117770167094	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTGTTTGTGTCTTTT	NA	False	NA	13	True	AATAAA	-18	NA	151916117	151942465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937512_151937660_151938031_151940208_151941104_151941242_151942243
ES.22790.91	chr3	+	4119	22	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	19	junction_19	502.910337193655	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916117	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.92	chr3	+	1850	16	NNC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	433.662111172589	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151938154
ES.22790.93	chr3	+	2383	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	479.82707526844	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916117	151938408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921237_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926416_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
ES.22790.94	chr3	+	8587	21	NNC	ENSMUSG00000028034.16	novel	4525	22	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_16	559.357423746213	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916117	151942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151932516_151932714_151933883_151937513_151939340_151940160_151940208_151941104_151941242_151942243
ES.22790.95	chr3	+	1005	11	ISM	ENSMUSG00000028034.16	ENSMUST00000198227.5	3163	16	-11	4331	-1	36	5prime_fragment	FALSE	canonical	3	849	junction_4	159.629226647253	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGGTGTTCGAATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	151916117	151926172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101
ES.22790.96	chr3	+	6603	20	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	74	junction_19	373.246081183867	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGAGTGTTTGTGTCT	NA	False	NA	10	True	AATAAA	-15	NA	151916117	151942462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ES.22790.97	chr3	+	6354	20	NNC	ENSMUSG00000028034.16	novel	2374	20	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	17	junction_1	408.462240191244	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGATGAGTGTTTGTGT	NA	False	NA	8	True	AATAAA	-13	NA	151916117	151942460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_151916228_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22790.98	chr3	+	6598	20	NIC	ENSMUSG00000028034.16	novel	2526	20	NA	NA	-1	3	intron_retention	FALSE	canonical	1	74	junction_19	396.655791807601	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGTTTGTGTCTTTTA	NA	False	NA	14	True	AATAAA	-19	NA	151916117	151942466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ES.22790.99	chr3	+	4056	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	60	2407	0	-1000	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCAGTATCATAATTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	151916118	151940056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ES.22791.1	chr3	-	5044	2	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCTATTACAATAA	NA	False	NA	NA	False	NA	NA	NA	151925063	151919900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151922064_151922182
ES.22791.2	chr3	-	2767	15	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCTATTACAATAA	NA	False	NA	NA	False	NA	NA	NA	151931791	151919900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151921268_151923045_151923084_151923469_151923520_151923609_151923684_151923848_151923907_151925318_151925482_151925567_151925667_151925770_151925875_151926101_151926203_151926320_151926422_151926901_151927044_151927718_151927881_151928464_151928618_151928922_151929001_151931714
ES.22791.3	chr3	-	4954	3	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCTATTACAATAA	NA	False	NA	NA	False	NA	NA	NA	151925063	151919900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151922064_151922182_151923520_151923609
ES.22791.4	chr3	-	4402	5	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCTATTACAATAA	NA	False	NA	NA	False	NA	NA	NA	151925063	151919900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151922054_151922173_151923084_151923469_151923520_151923609_151923684_151923848
ES.22791.5	chr3	-	2747	5	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCTATTACAATAA	NA	False	NA	NA	False	NA	NA	NA	151925063	151919900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151921268_151923045_151923084_151923466_151923520_151923609_151923684_151923848
ES.22791.6	chr3	-	6878	12	Antisense	novelGene_ENSMUSG00000028034.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	151932310	151919923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_151921268_151923045_151923084_151923469_151923520_151923609_151923684_151923848_151923907_151925318_151925482_151925567_151925667_151925770_151926203_151926320_151926422_151926901_151927880_151928464_151928618_151928922
ES.22792.1	chr3	-	2743	12	NIC	ENSMUSG00000039103.13	novel	2564	13	NA	NA	-113	0	intron_retention	TRUE	canonical	1	2	junction_4	2.09288444240388	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTTTCTTTATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	151971545	151942618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151960921_151961003_151971349
ES.22793.1	chr3	-	5354	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	1	-390	-1	390	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAGGCTTCTTGCTTTA	NA	False	NA	NA	False	AATAAA	-40	NA	152046043	151979095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.12	chr3	-	4440	11	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-5114	13	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	51.1840795560495	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	-21	True	AATAAA	-26	NA	152028466	151979472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152023250_152023375_152026246_152026381_152027986
ES.22793.13	chr3	-	4775	14	FSM	ENSMUSG00000054942.14	ENSMUST00000068243.11	2689	14	9	-2095	9	13	multi-exon	FALSE	canonical	1	3	junction_6	50.9351600816605	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	-21	True	AATAAA	-26	NA	152046033	151979472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.14	chr3	-	5195	17	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	5	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.5031511770595	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCACTTTGTTCT	NA	False	NA	-21	True	AATAAA	-26	NA	152046005	151979472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152044571_152044828_152045888
ES.22793.15	chr3	-	6915	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	47.6611185582359	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046033	151979481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028773_152037819_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.16	chr3	-	4573	12	NIC	ENSMUSG00000054942.14	novel	2689	14	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.886388785096	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046011	151979481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151990838_151990974_151993141_151993241_151994692_151994780_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.17	chr3	-	4922	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.1952510339164	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046004	151979481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996163_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.18	chr3	-	6434	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-13	4	intron_retention	FALSE	canonical	3	131	junction_6	25.105085264194	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTTAATGACTGTCA	NA	False	NA	-30	True	AATAAA	-17	NA	152046057	151979481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.20	chr3	-	4717	18	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.8586365824593	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTAATGACTGTC	NA	False	NA	-31	True	AATAAA	-16	NA	152046023	151979482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151980974_151981027_151981336_151981511_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.21	chr3	-	4095	11	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-2963	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.9063961523373	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	-32	True	AATAAA	-15	NA	152026315	151979483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989308_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246
ES.22793.22	chr3	-	5023	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-5991	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.8732585990226	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	-32	True	AATAAA	-15	NA	152052035	151979483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152051823
ES.22793.23	chr3	-	4821	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	50.1831340071095	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	-32	True	AATAAA	-15	NA	152046033	151979483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151984529_151984647_151989418_151989473_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.24	chr3	-	4850	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	48.8133157644343	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	-32	True	AATAAA	-15	NA	152046044	151979483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.25	chr3	-	5044	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-5989	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.8732585990226	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTCTTAATGACTGT	NA	False	NA	-32	True	AATAAA	-15	NA	152052033	151979483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152051800
ES.22793.26	chr3	-	4911	17	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.1591388280151	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTCTTAATGACTG	NA	False	NA	-33	True	AATAAA	-14	NA	152046033	151979484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151981042_151981085_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.27	chr3	-	4853	17	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.1591388280151	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTCTTAATGACTG	NA	False	NA	-33	True	AATAAA	-14	NA	152046033	151979484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043478_152043579_152043682_152045888
ES.22793.29	chr3	-	4964	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	48.7054639873415	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCTTAATGACT	NA	False	NA	-34	True	AATAAA	-13	NA	152046033	151979485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002743_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.3	chr3	-	5156	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	25	-216	1	216	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGACGTGCTGGCTGC	NA	False	NA	NA	False	AATAAA	-21	NA	152046019	151979269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.30	chr3	-	5054	17	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	60.6694102802228	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTTGTTCTTAATGA	NA	False	NA	-36	True	AATAAA	-11	NA	152046033	151979487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151995811_151995914_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.32	chr3	-	8828	5	NNC	ENSMUSG00000054942.14	novel	2689	14	NA	NA	-4347	-4	intron_retention	TRUE	non_canonical	0	0	junction_3	77.5806032459145	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGCTTTGTTCTTAAT	9968	False	NA	-38	True	AATAAA	-9	NA	151995535	151979489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151991064_151991253_151991345_151991561
ES.22793.33	chr3	-	4520	15	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	1918	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	48.7122433589465	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGCTTTGTTCTTAAT	NA	False	NA	-38	True	AATAAA	-9	NA	152041653	151979489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152041619
ES.22793.34	chr3	-	7340	6	NNC	ENSMUSG00000054942.14	novel	2689	14	NA	NA	-4230	-8	intron_retention	TRUE	non_canonical	0	0	junction_4	79.0179726391408	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGAACTGCTTTGTTCT	NA	False	NA	-42	True	AATAAA	-5	NA	151995418	151979493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151991064_151991253_151991344_151991561
ES.22793.35	chr3	-	3740	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	4	1221	2	861	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTAAGTATTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	152046040	151980706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.36	chr3	-	2904	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	10	2051	8	31	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGACTTAGAGGCTGGA	NA	False	NA	NA	False	ATTAAA	-17	NA	152046034	151981536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.37	chr3	-	2971	1	Intergenic	novelGene_18717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATGTACTCAGGCA	NA	False	NA	NA	False	AAGAAA	-2	NA	152008029	152005058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152005100_152008000
ES.22793.38	chr3	-	1144	1	Intergenic	novelGene_18718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCAGGTCCTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	152011145	152010001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152010000_152011100
ES.22793.39	chr3	-	3614	6	NNC	ENSMUSG00000054942.14	novel	2689	14	NA	NA	28	11453	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	80.5605362444913	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAACTGTGGGCTTCACT	NA	False	NA	6	True	NA	NA	NA	152045982	152025578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152026381_152027986_152028773_152037819_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.4	chr3	-	5037	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-2	212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	47.8732585990226	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACTAGTGACGTGCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	152046023	151979273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043649_152045974
ES.22793.40	chr3	-	1703	6	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-14	38371	8	11447	5prime_fragment	FALSE	canonical	3	188	junction_4	9.69535971483266	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCTTAACTGTGGGC	NA	False	NA	0	True	NA	NA	NA	152046034	152025584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.41	chr3	-	1645	5	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	-48	40069	-24	9749	5prime_fragment	FALSE	canonical	3	188	junction_3	9.28708781050335	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGAGTATTATTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	152046068	152027282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.42	chr3	-	3526	5	NNC	ENSMUSG00000054942.14	novel	2842	4	NA	NA	16	9747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.8031905001207	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCTGAGTATTATTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	152045994	152027284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152028773_152037819_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.43	chr3	-	4345	3	NNC	ENSMUSG00000054942.14	novel	2842	4	NA	NA	1255	9741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATACCTGAGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	152042316	152027290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152028773_152037819_152039255_152040888
ES.22793.44	chr3	-	3541	5	NNC	ENSMUSG00000054942.14	novel	2842	4	NA	NA	5	9741	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.8031905001207	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATACCTGAGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	152046005	152027290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152028767_152037803_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.5	chr3	-	5081	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	-92	-24	-92	24	multi-exon	FALSE	canonical	3	131	junction_7	24.7194030852059	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTCTTAATCATGTCA	NA	False	NA	-10	True	AATAAA	-37	NA	152046136	151979461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.6	chr3	-	4866	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	3	15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	50.0591486877967	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCACTTTGTTCTTA	NA	False	NA	-19	True	AATAAA	-28	NA	152046017	151979470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.7	chr3	-	4913	17	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	-2	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.1591388280151	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCACTTTGTTCTTA	NA	False	NA	-19	True	AATAAA	-28	NA	152046023	151979470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151979934_151979979_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.8	chr3	-	4649	19	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	9	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.5055460418226	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCACTTTGTTCTTA	NA	False	NA	-19	True	AATAAA	-28	NA	152046033	151979470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151980239_151980328_151981770_151981928_151982000_151982070_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22793.9	chr3	-	4891	16	NNC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.6660273930616	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCACTTTGTTCTTA	NA	False	NA	-19	True	AATAAA	-28	NA	152046019	151979470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993212_151994727_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ES.22794.1	chr3	-	794	1	Intergenic	novelGene_18719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGCTTTTAAAACGCT	NA	False	NA	NA	False	NA	NA	NA	152054967	152054173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152054200_152055000
ES.22795.1	chr3	+	7792	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	90.5650245328684	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101376	152168463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152132913_152134485_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.11	chr3	+	3082	11	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-20	1	intron_retention	FALSE	canonical	2	9	junction_2	67.6598108185354	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101619	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152435_152152575_152154415_152154564_152154649_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.12	chr3	+	4788	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	170	junction_1	23.7116649680185	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGAAAGCTTGTTGTG	NA	False	NA	14	True	AATAAA	-23	NA	152101619	152165108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.13	chr3	+	2713	13	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.4145121679501	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101620	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161463_152161592_152163505_152163607_152163890
ES.22795.14	chr3	+	4335	15	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	74.0165797752953	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101621	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.15	chr3	+	9671	12	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	170	junction_1	25.9898263630245	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101623	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.16	chr3	+	2555	12	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	66.524462660223	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101631	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.18	chr3	+	2827	12	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	196	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	66.524462660223	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGTGGTTTCCAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	152101631	152165385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.19	chr3	+	2267	11	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	-160	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.4653062681466	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGAGTTCACAATTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	152101631	152164951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.2	chr3	+	2761	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-58	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	64.2475140029212	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGTTGTGGATTCCT	NA	False	NA	21	True	AATAAA	-30	NA	152101581	152165115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.20	chr3	+	4336	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	76.4714499212695	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGAAAGCTTGTTGTG	NA	False	NA	14	True	AATAAA	-23	NA	152101631	152165108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134485_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.21	chr3	+	4406	4	ISM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-8	31568	-8	3404	5prime_fragment	FALSE	canonical	3	170	junction_1	24.9131825880731	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGTGTCATTACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	152101631	152136895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913
ES.22795.22	chr3	+	2845	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	77.7324344205606	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTCTGTTTTTCATCT	NA	False	NA	95	True	GATAAA	-17	NA	152101632	152165189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.23	chr3	+	6952	5	NIC	ENSMUSG00000039068.17	novel	2491	12	NA	NA	-7	4	intron_retention	FALSE	canonical	0	0	junction_1	105.485781032327	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTGGATTCCTTTG	NA	False	NA	24	True	AATAAA	-33	NA	152101632	152165118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152152435_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.24	chr3	+	4034	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	61.627253446401	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAAAGCTTGTTGTGG	NA	False	NA	15	True	AATAAA	-24	NA	152101632	152165109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890_152164689_152164914
ES.22795.25	chr3	+	2943	10	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_1	73.345453543867	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101633	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152152435_152152575_152154415_152154564_152154649_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.26	chr3	+	4188	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	61.537420864598	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTTTTTCATCTGTA	NA	False	NA	98	True	GATAAA	-20	NA	152101633	152165192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.27	chr3	+	4097	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-4	3514	-4	-162	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAAGAGTTCACAATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	152101635	152164949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.28	chr3	+	4018	11	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	86.8771546495395	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152101636	152165111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.29	chr3	+	6235	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-3	4	intron_retention	FALSE	canonical	0	0	junction_2	95.3112621172888	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTGGATTCCTTTG	NA	False	NA	24	True	AATAAA	-33	NA	152101636	152165118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128256_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152163607_152163890
ES.22795.3	chr3	+	4404	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	61.5862314590318	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTCTGTTTTTCATCT	NA	False	NA	95	True	GATAAA	-17	NA	152101583	152165189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134485_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.30	chr3	+	4639	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.8132445305423	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152101639	152165111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134854_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.31	chr3	+	3591	12	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	3	-1	intron_retention	FALSE	canonical	2	8	junction_3	67.0519719482489	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101642	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.33	chr3	+	4277	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	86.3509687028372	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101654	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163582_152163890
ES.22795.35	chr3	+	4022	9	NIC	ENSMUSG00000039068.17	novel	2491	12	NA	NA	-10	1	intron_retention	FALSE	canonical	2	9	junction_2	75.4250455750608	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101658	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152435_152152575_152154415_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.36	chr3	+	7436	13	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	90.0028934720064	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCTGGCTTCCATTTA	NA	False	NA	9	True	AATAAA	-11	NA	152101664	152168459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152132913_152134485_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.37	chr3	+	6653	12	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	170	junction_1	23.9168670382561	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152101671	152165111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152163607_152163890
ES.22795.38	chr3	+	4260	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.2399159875519	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101676	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155133_152155174_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.39	chr3	+	7582	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	61.5862314590318	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	12	True	AATAAA	-14	NA	152101678	152168462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134485_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.4	chr3	+	4573	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-41	3075	-41	199	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGTTTCCAAAAGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	152101598	152165388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.40	chr3	+	1942	4	ISM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	45	33979	16	993	5prime_fragment	FALSE	canonical	3	170	junction_1	24.9131825880731	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCATGCGTTCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	152101684	152134484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913
ES.22795.41	chr3	+	6125	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	16	1	intron_retention	FALSE	canonical	3	170	junction_1	25.3410076095381	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152101684	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152163607_152163890
ES.22795.42	chr3	+	2556	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	81.9520523775268	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101691	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.45	chr3	+	3228	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	61.3900626805216	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152101709	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152133205_152134163_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.46	chr3	+	7857	15	NNC	ENSMUSG00000039068.17	novel	1118	2	NA	NA	187	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.2439402968258	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	12	True	AATAAA	-14	NA	152101955	152168462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102285_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.47	chr3	+	7863	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-324	0	238	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152102006	152168463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.48	chr3	+	4568	15	NIC	ENSMUSG00000039068.17	novel	4197	14	NA	NA	245	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.3496057115885	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152102013	152165114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.49	chr3	+	4585	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-315	3269	247	5	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTTTTCATCTGTATT	NA	False	NA	100	True	GATAAA	-22	NA	152102015	152165194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.5	chr3	+	7643	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-36	0	-36	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101603	152168463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.50	chr3	+	8382	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	254	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8107198890072	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152102022	152168463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152103766_152103863_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.51	chr3	+	4799	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	-303	3043	259	231	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTATATATCCTATGGT	NA	False	NA	NA	False	NA	NA	NA	152102027	152165420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.52	chr3	+	4567	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	260	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.2605878677054	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152102028	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134485_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.53	chr3	+	7899	15	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	262	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.3496057115885	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	12	True	AATAAA	-14	NA	152102030	152168462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.54	chr3	+	4636	4	ISM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	-289	28212	263	3411	5prime_fragment	FALSE	canonical	0	0	junction_1	104.926429251908	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATTACAGTTGTCTAG	NA	False	NA	NA	False	AATAAA	-22	NA	152102031	152136902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913
ES.22795.55	chr3	+	4646	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-272	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8107198890072	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTTTTTCATCTGTA	NA	False	NA	98	True	GATAAA	-20	NA	152102048	152165192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152103766_152103863_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.56	chr3	+	4930	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-253	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.1381309605498	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102067	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155133_152155174_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.59	chr3	+	4177	14	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6923076923077	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATAGAAAGCTTGTTGT	NA	False	NA	13	True	AATAAA	-22	NA	152102316	152165107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157761_152161456_152161592_152163505_152163607_152163890
ES.22795.6	chr3	+	7714	15	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	76.4714499212695	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101608	152168463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134485_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.60	chr3	+	3858	13	NNC	ENSMUSG00000039068.17	novel	4197	14	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1792027053862	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102319	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152133097_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.61	chr3	+	2701	14	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.0792752404634	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102322	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.63	chr3	+	4713	13	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	64.1722400176968	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152102322	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.64	chr3	+	4211	14	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.4654849801888	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102322	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134485_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.65	chr3	+	4196	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8107198890072	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGGTGGTTTCCAA	NA	False	NA	NA	False	AATAAA	-17	NA	152102323	152165382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890_152164200_152164468
ES.22795.66	chr3	+	4688	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	97.6995602939576	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAAAGCTTGTTGTGG	NA	False	NA	15	True	AATAAA	-24	NA	152102323	152165109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157631_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.67	chr3	+	4352	16	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	99.2880433665381	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTGGATTCCTTTG	NA	False	NA	24	True	AATAAA	-33	NA	152102323	152165118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152149458_152149549_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.68	chr3	+	5987	13	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.6671125150525	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGCTTCCATTTAT	NA	False	NA	10	True	AATAAA	-12	NA	152102323	152168460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.69	chr3	+	7389	13	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	83.2861116206591	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGCTTCCATTTAT	NA	False	NA	10	True	AATAAA	-12	NA	152102323	152168460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.7	chr3	+	4364	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	-26	3269	-26	5	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTTTTCATCTGTATT	NA	False	NA	100	True	GATAAA	-22	NA	152101613	152165194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.70	chr3	+	3926	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8107198890072	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102323	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890_152164200_152164468
ES.22795.71	chr3	+	6046	14	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.0792752404634	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGCTTCCATTTAT	NA	False	NA	10	True	AATAAA	-12	NA	152102325	152168460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.72	chr3	+	4633	14	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	58.1423472554961	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	NA	False	NA	19	True	AATAAA	-28	NA	152102325	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.74	chr3	+	4643	14	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	78.9537352358475	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAAAGCTTGTTGTGG	NA	False	NA	15	True	AATAAA	-24	NA	152102326	152165109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152132913_152134485_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.75	chr3	+	2779	4	ISM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	6	29774	-4	1849	5prime_fragment	FALSE	canonical	0	0	junction_1	104.926429251908	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTGGTTTATCAAAC	NA	False	NA	NA	False	NA	NA	NA	152102326	152135340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913
ES.22795.76	chr3	+	4444	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.6797454755283	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152102326	152165111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152102584_152102838_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.77	chr3	+	6423	13	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	82.0482158381413	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGCTTCCATTTAT	NA	False	NA	10	True	AATAAA	-12	NA	152102326	152168460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.79	chr3	+	6102	13	NIC	ENSMUSG00000039068.17	novel	4197	14	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_1	78.1882965808964	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTTGTTGTGGATT	NA	False	NA	18	True	AATAAA	-27	NA	152102327	152165112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152163607_152163890
ES.22795.80	chr3	+	7648	15	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.0044506110954	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGGCTTCCATTTATT	NA	False	NA	11	True	AATAAA	-13	NA	152102328	152168461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152125651_152125778_152128254_152128409_152130887_152130997_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.81	chr3	+	4342	15	NIC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	94.984209213953	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGCTTGTTGTGGAT	NA	False	NA	17	True	AATAAA	-26	NA	152102328	152165111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152143374_152143528_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.82	chr3	+	4402	16	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.996149541565	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATAGAAAGCTTGTTG	NA	False	NA	12	True	AATAAA	-21	NA	152102330	152165106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152103974_152104086_152125651_152125778_152128254_152128409_152130887_152130997_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.83	chr3	+	4348	16	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.226390937454	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTGGATTCCTTTG	NA	False	NA	24	True	AATAAA	-33	NA	152102330	152165118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152102399_152103766_152103863_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.86	chr3	+	3141	11	NIC	ENSMUSG00000039068.17	novel	588	6	NA	NA	9935	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	63.7178154051126	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTTGTTGTGGATTC	4089	False	NA	19	True	AATAAA	-28	NA	152151470	152165113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22795.9	chr3	+	6070	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	64.2475140029212	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTTCCATTTATTT	NA	False	NA	12	True	AATAAA	-14	NA	152101619	152168462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ES.22796.1	chr3	-	1630	1	Antisense	novelGene_ENSMUSG00000039068.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACCTGCCATCTTGT	6498	False	NA	NA	False	AATAAA	-26	NA	152102256	152100626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_152100600_152102300
ES.22797.1	chr3	-	5047	1	Intergenic	novelGene_18720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTTAATTGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	152121054	152116007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152116000_152121100
ES.22798.1	chr3	-	174	1	Intergenic	novelGene_18721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCCGCGTCTAAGGCA	5313	False	NA	NA	False	NA	NA	NA	152171053	152170879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152170900_152171100
ES.22799.1	chr3	+	4481	12	NNC	ENSMUSG00000039047.18	novel	1097	7	NA	NA	-11427	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.626680706163	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	152408309	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152408422_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492091_152492330
ES.22799.10	chr3	+	2608	11	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	1524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	155.44632514151	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCTATATGTTCATCT	3964	False	NA	NA	False	NA	NA	NA	152419743	152493083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491870_152492319
ES.22799.11	chr3	+	4276	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	1	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCTTTCTTGTGCAG	3964	False	NA	NA	False	NA	NA	NA	152419743	152494657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491926_152492373
ES.22799.12	chr3	+	4480	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	1	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAACCTTTCTTGTG	3964	False	NA	NA	False	NA	NA	NA	152419743	152494654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491943_152492183
ES.22799.13	chr3	+	1340	11	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	60	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	122.825078872354	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTGTTTGAGTTAT	3964	False	NA	72	True	AATATA	-11	NA	152419743	152491350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450392_152453244_152453411_152472075_152472161_152491032
ES.22799.14	chr3	+	4239	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3964	False	NA	NA	False	NA	NA	NA	152419743	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492203_152492693
ES.22799.15	chr3	+	4491	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3964	False	NA	NA	False	NA	NA	NA	152419743	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491991_152492229
ES.22799.16	chr3	+	4350	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	1	-139	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTGTTGTTTGTTT	3964	False	NA	NA	False	NA	NA	NA	152419743	152494524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492003_152492243
ES.22799.17	chr3	+	2701	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	2	1526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTATATGTTCATCTGT	3965	False	NA	NA	False	NA	NA	NA	152419744	152493085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491870_152492319
ES.22799.18	chr3	+	4490	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3965	False	NA	NA	False	NA	NA	NA	152419744	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491901_152492139
ES.22799.19	chr3	+	2933	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	0	-1551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATACTGTTTTCTAATT	3970	False	NA	NA	False	NA	NA	NA	152419749	152493112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491870_152492109
ES.22799.2	chr3	+	4503	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3951	False	NA	NA	False	NA	NA	NA	152419730	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491870_152492109
ES.22799.20	chr3	+	1332	10	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	0	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.091416420753	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTTTGAGTTATAG	3970	False	NA	74	True	AATATA	-13	NA	152419749	152491352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152443822_152443959_152445765_152445878_152448125_152448234_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.21	chr3	+	1509	10	NIC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	24	junction_4	123.466594672405	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTGTTTACAATG	3970	False	NA	108	True	NA	NA	NA	152419749	152491560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.22	chr3	+	4436	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	0	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAGAAAACCTTT	3970	False	NA	NA	False	NA	NA	NA	152419749	152494648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491885_152492157
ES.22799.24	chr3	+	4467	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	1	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAGAAAACCTTT	3971	False	NA	NA	False	NA	NA	NA	152419750	152494648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491913_152492153
ES.22799.25	chr3	+	1201	9	NIC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	125.841169733915	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTAAAACATAATATT	3971	False	NA	9	True	AAGAAA	-30	NA	152419750	152491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152419865_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.26	chr3	+	1665	11	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	5853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	124.202093380104	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCTGAGATTTGTGAA	3971	False	NA	NA	False	NA	NA	NA	152419750	152478014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152477441
ES.22799.27	chr3	+	4306	10	NIC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	-15	intron_retention	FALSE	canonical	3	359	junction_7	32.0589734361189	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTCCGTTCATAGG	3971	False	NA	18	True	AGTAAA	-22	NA	152419750	152491470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152453411_152472075_152472161_152491032
ES.22799.28	chr3	+	1519	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	14	3204	1	-26	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACTAAAGGAAATTACTT	3971	False	NA	7	True	AGTAAA	-11	NA	152419750	152491459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.29	chr3	+	4513	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3971	False	NA	NA	False	NA	NA	NA	152419750	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492322_152492531
ES.22799.3	chr3	+	4497	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3957	False	NA	NA	False	NA	NA	NA	152419736	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492091_152492330
ES.22799.30	chr3	+	4270	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3971	False	NA	NA	False	NA	NA	NA	152419750	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492017_152492469
ES.22799.31	chr3	+	4273	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3972	False	NA	NA	False	NA	NA	NA	152419751	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491901_152492349
ES.22799.32	chr3	+	4481	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3972	False	NA	NA	False	NA	NA	NA	152419751	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491973_152492213
ES.22799.33	chr3	+	2739	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	5	-1550	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATACTGTTTTCTAATTG	3985	False	NA	NA	False	NA	NA	NA	152419764	152493113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152492144_152492563
ES.22799.34	chr3	+	4452	12	NNC	ENSMUSG00000039047.18	novel	1761	12	NA	NA	6	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAGAAAACCTTT	3986	False	NA	NA	False	NA	NA	NA	152419765	152494648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491883_152492123
ES.22799.35	chr3	+	4084	8	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1868	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	131.736130819397	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	152445766	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491892_152492133
ES.22799.36	chr3	+	3512	4	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	9490	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	181.903515328563	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	152453388	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152453411_152472075_152472161_152491032_152491884_152492109
ES.22799.37	chr3	+	3564	5	NNC	ENSMUSG00000039047.18	novel	415	2	NA	NA	19	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	173.205080756888	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAGAAAACCTTT	NA	False	NA	NA	False	NA	NA	NA	152469036	152494648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152469551_152472075_152472161_152491032_152491209_152491617_152491982_152492223
ES.22799.38	chr3	+	3085	1	Intergenic	novelGene_18723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCAGTCTGTGGTCGG	NA	False	NA	NA	False	ATTAAA	-27	NA	152477241	152480326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_152477200_152480300
ES.22799.39	chr3	+	2652	1	Genic_Genomic	ENSMUSG00000039047.18	novel	NA	NA	NA	NA	23819	825	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACTTAAAACGT	NA	False	NA	NA	False	AATACA	-5	NA	152492836	152495488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_152492800_152495500
ES.22799.4	chr3	+	1456	11	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	0	1369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	124.202093380104	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTTTATATTGTAG	3963	False	NA	NA	False	AGTAAA	-16	NA	152419742	152473530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152473174
ES.22799.5	chr3	+	5990	9	NIC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	359	junction_6	33.3520520358193	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTTAAAACATAATATT	3963	False	NA	9	True	AAGAAA	-30	NA	152419742	152491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152450200_152450350_152453411_152472075_152472161_152491032
ES.22799.6	chr3	+	1628	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	6	3103	0	1	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTGTTTACAATG	3963	False	NA	108	True	NA	NA	NA	152419742	152491560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.7	chr3	+	3278	10	NIC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	62	intron_retention	FALSE	canonical	3	317	junction_7	41.6434009118632	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTTTGAGTTATAG	3964	False	NA	74	True	AATATA	-13	NA	152419743	152491352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.22799.8	chr3	+	4280	12	NNC	ENSMUSG00000039047.18	novel	4737	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.183863792167	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTGTGCAGTAAGCC	3964	False	NA	NA	False	NA	NA	NA	152419743	152494663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032_152491870_152492319
ES.22799.9	chr3	+	1388	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	7	3342	1	31	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGCCACAGAATATAT	3964	False	NA	43	True	AATGAA	-39	NA	152419743	152491321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ES.228.1	chr1	-	5220	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-18	1356	combination_of_known_splicesites	FALSE	canonical	2	15	junction_10	81.5917097540658	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTATTAATTCATCTT	NA	False	NA	NA	False	NA	NA	NA	33853626	33799269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.10	chr1	-	4115	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	100.52396065947	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853642	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.11	chr1	-	4117	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.926263661725	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853676	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33802289_33802381_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.12	chr1	-	3945	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	117.555826946092	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853613	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.13	chr1	-	3823	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	83.2840722250691	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853627	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.14	chr1	-	4057	15	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	82.1972490725939	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853656	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822882_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.15	chr1	-	3897	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_10	81.5917097540658	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853659	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.18	chr1	-	3748	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	80.9882744088055	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853539	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.19	chr1	-	4063	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853657	33800625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.2	chr1	-	4204	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-11	389	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	83.2840722250691	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTGTGATTCCAGTAC	NA	False	NA	NA	False	ATTAAA	-19	NA	33853619	33800236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.21	chr1	-	2285	1	NIC	ENSMUSG00000042197.14	novel	3578	13	NA	NA	20106	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGAGGAAATTTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	33802912	33800627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33800600_33802900
ES.228.22	chr1	-	3307	11	NNC	ENSMUSG00000042197.14	novel	3578	13	NA	NA	1741	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.324064816773	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGAGGAAATTTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	33821277	33800627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33802289_33802327_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148
ES.228.25	chr1	-	3760	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	115.890254208057	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGAGGAAATTTTTTC	NA	False	NA	-4	True	AATAAA	-15	NA	33853497	33800627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.27	chr1	-	4010	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	105.277960128837	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACTAAGAGGAAATTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	33853563	33800629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33823986_33824088_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.28	chr1	-	4102	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	118.245319381173	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACTAAGAGGAAATTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	33853627	33800629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821142_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.3	chr1	-	4382	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-36	-388	7	388	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCCTGTGATTCCAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	33853644	33800237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.30	chr1	-	4028	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	79.6812847716272	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAACTAAGAGGAAATT	NA	False	NA	-9	True	AATAAA	-10	NA	33853642	33800632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852764_33852892_33853418
ES.228.31	chr1	-	3817	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-49	190	-6	-190	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTTATGTGACCC	NA	False	NA	3	True	AATAAA	-31	NA	33853657	33800815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.32	chr1	-	3913	17	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-32	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.082338063734	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTTATGTGACCC	NA	False	NA	3	True	AATAAA	-31	NA	33853539	33800815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33802289_33802381_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.33	chr1	-	3527	13	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	11	-193	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	110.753824864978	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCTGTGTTATGTGA	NA	False	NA	0	True	AATAAA	-28	NA	33853665	33800818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.34	chr1	-	6033	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	103.169676854307	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCCAGAAATTCTCT	NA	False	NA	-11	True	AATAAA	-17	NA	33853642	33800829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33840449_33842695_33844419_33844501_33852807_33852892_33853418
ES.228.35	chr1	-	3530	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-4	-205	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	84.7388609565471	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCCAGAAATTCTC	NA	False	NA	-12	True	AATAAA	-16	NA	33853511	33800830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33844419_33844501_33852807_33852892_33853418
ES.228.36	chr1	-	4587	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-710	-205	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCCAGAAATTCTC	NA	False	NA	-12	True	AATAAA	-16	NA	33854386	33800830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.38	chr1	-	3722	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-28	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	79.6812847716272	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTTTCCAGAAATTCT	NA	False	NA	-13	True	AATAAA	-15	NA	33853535	33800831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852764_33852892_33853418
ES.228.4	chr1	-	4131	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-50	-123	-7	123	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTAAAGTCTAGTCTATT	NA	False	NA	NA	False	TATAAA	-33	NA	33853658	33800502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.41	chr1	-	3657	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-18	-207	combination_of_known_splicesites	FALSE	canonical	2	15	junction_10	81.5917097540658	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTTTTCCAGAAATTC	NA	False	NA	-14	True	AATAAA	-14	NA	33853626	33800832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.42	chr1	-	3644	15	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	0	-208	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	82.125712496521	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTTTCCAGAAATT	NA	False	NA	-15	True	AATAAA	-13	NA	33853292	33800833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853208
ES.228.43	chr1	-	3801	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-29	-208	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	100.52396065947	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTTTCCAGAAATT	NA	False	NA	-15	True	AATAAA	-13	NA	33853536	33800833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.44	chr1	-	4554	12	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	26836	208	-3754	-208	3prime_fragment	FALSE	canonical	3	234	junction_7	29.2164903057353	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTTTCCAGAAATT	NA	False	NA	-15	True	AATAAA	-13	NA	33826772	33800833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487
ES.228.45	chr1	-	3645	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	7	-208	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	80.9882744088055	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTTTTTCCAGAAATT	NA	False	NA	-15	True	AATAAA	-13	NA	33853644	33800833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.46	chr1	-	3624	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-53	387	-10	-387	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTGACACGTTTCTCC	NA	False	NA	NA	False	CATAAA	-16	NA	33853661	33801012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.47	chr1	-	3509	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	3	-388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	79.6812847716272	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTGACACGTTTCTC	NA	False	NA	NA	False	CATAAA	-15	NA	33853504	33801013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852764_33852892_33853418
ES.228.48	chr1	-	3587	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-20	-391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	105.277960128837	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATGGGTGACACGTTT	NA	False	NA	NA	False	CATAAA	-12	NA	33853527	33801016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33823986_33824088_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.49	chr1	-	3489	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	3	-421	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACCAATGGAAACATAAAC	NA	False	NA	NA	False	AATGAA	-18	NA	33853504	33801046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.50	chr1	-	3747	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-48	7704	-5	-7704	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGATTGCAAATTTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	33853656	33808329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.51	chr1	-	3946	14	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	5	-7708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	109.790278829429	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCTAAGATTGCAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	33853646	33808333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33849512_33849726_33852807_33852892_33853418
ES.228.53	chr1	-	3507	14	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	5	7941	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_8	107.897112946772	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTCTGTCTTGCTTGTC	NA	False	NA	34	True	NA	NA	NA	33853646	33808682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33821639_33821763_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.54	chr1	-	3395	13	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	7913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	86.0356838113633	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTCCTAAACCTTT	NA	False	NA	6	True	AATAAA	-23	NA	33853642	33808710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852764_33852892_33853418
ES.228.56	chr1	-	3238	12	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	7	7909	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	88.60255765575	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTTTCCTAAAC	NA	False	NA	2	True	AATAAA	-19	NA	33853644	33808714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.57	chr1	-	3195	12	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	8	7909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	121.442909077843	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTTTCCTAAAC	NA	False	NA	2	True	AATAAA	-19	NA	33853643	33808714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816941_33818120_33818273_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.58	chr1	-	3362	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-48	8089	-5	7909	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTTTCCTAAAC	NA	False	NA	2	True	AATAAA	-19	NA	33853656	33808714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.59	chr1	-	5315	12	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-10	7907	intron_retention	FALSE	canonical	3	234	junction_4	32.4773283923437	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGTCTGTTTCCTAA	NA	False	NA	0	True	AATAAA	-17	NA	33853618	33808716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33808989_33809849_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.6	chr1	-	3875	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-23	121	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	84.7388609565471	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTAAAGTCTAGTCTA	NA	False	NA	NA	False	TATAAA	-31	NA	33853530	33800504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33844419_33844501_33852807_33852892_33853418
ES.228.60	chr1	-	3109	12	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-28	7903	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	92.0101503563332	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853535	33808720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33844419_33844501_33852807_33852892_33853418
ES.228.61	chr1	-	3201	12	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	9	7903	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	88.0086396960948	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853642	33808720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.62	chr1	-	2880	9	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	1	7903	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	100.703695935154	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853650	33808720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33852807_33852892_33853418
ES.228.64	chr1	-	171	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	33821762	33821591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33821600_33821800
ES.228.65	chr1	-	5119	1	ISM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	17312	4	3509	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTGCTGCCTTTCTTT	2677	False	NA	0	True	TATAAA	-10	NA	33836339	33831220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33831200_33836300
ES.228.66	chr1	-	8728	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	134	3014	-10	-3014	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAATAATAAAATCCTT	NA	False	NA	NA	False	AAGAAA	-6	NA	33853517	33834230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
ES.228.67	chr1	-	6345	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	-13	5544	12	-5544	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTGTACTCCTGTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	33853664	33836760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
ES.228.68	chr1	-	6494	5	NNC	ENSMUSG00000042197.14	novel	11876	4	NA	NA	-4	-5555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.676826059854	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGAGTCCCATTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	33853612	33836771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33842695_33844419_33844501_33849513_33849726_33852807_33852892_33853418
ES.228.69	chr1	-	5305	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	9	6562	9	-6562	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGTTCTTTTTAGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	33853642	33837778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
ES.228.7	chr1	-	4029	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-68	-3	0	3	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAATTTTTTCTATCC	NA	False	NA	1	True	AATAAA	-20	NA	33853676	33800622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.70	chr1	-	4346	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	9	7521	9	-7521	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGGCACGCCCACCT	NA	False	NA	NA	False	AATAAA	-28	NA	33853642	33838737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
ES.228.71	chr1	-	840	3	ISM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	28	12733	-15	8658	5prime_fragment	FALSE	canonical	3	286	junction_2	38.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCATGTGACTTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	33853623	33843949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33844501_33852807_33852892_33853418
ES.228.8	chr1	-	3953	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	115.735138234774	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAAATTTTTTCTAT	NA	False	NA	-1	True	AATAAA	-18	NA	33853495	33800624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822882_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.228.9	chr1	-	4026	15	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.1972490725939	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAAATTTTTTCTAT	NA	False	NA	-1	True	AATAAA	-18	NA	33853655	33800624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822293_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ES.2280.1	chr10	-	169	1	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAAAAAAGTCACT	3164	False	NA	NA	False	NA	NA	NA	6979789	6979620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_6979600_6979800
ES.22800.1	chr3	-	174	1	Intergenic	novelGene_18722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	152426508	152426334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152426300_152426500
ES.22801.1	chr3	+	181	1	Intergenic	novelGene_18724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4331	False	NA	NA	False	NA	NA	NA	152925484	152925665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_152925500_152925700
ES.22802.1	chr3	+	6204	2	Antisense	novelGene_ENSMUSG00000052544.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATAGATGGATGGATG	NA	False	NA	NA	False	NA	NA	NA	152955681	152962028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_152957738_152957880
ES.22802.2	chr3	+	3795	2	Antisense	novelGene_ENSMUSG00000052544.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACAGATAGATGGAT	NA	False	NA	NA	False	NA	NA	NA	152957892	152962023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_152961267_152961602
ES.22803.1	chr3	+	4927	1	Intergenic	novelGene_18733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCCTGACTGTTCATGG	NA	False	NA	NA	False	NA	NA	NA	153094375	153099302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153094400_153099300
ES.22804.1	chr3	+	120	1	Intergenic	novelGene_18735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTCGACACCACACAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	153161156	153161276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153161200_153161300
ES.22805.1	chr3	+	2643	1	Intergenic	novelGene_18736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-13	NA	153162557	153165200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153162600_153165200
ES.22805.2	chr3	+	2654	1	Intergenic	novelGene_18737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATTTCCATGAGCGT	NA	False	NA	NA	False	AATAAA	-9	NA	153163964	153166618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153164000_153166600
ES.22806.1	chr3	+	3840	1	Antisense	novelGene_ENSMUSG00000104908.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAAATAGTCTTCCTT	NA	False	NA	NA	False	AATGAA	-19	NA	153170448	153174288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_153170400_153174300
ES.22807.1	chr3	+	5506	1	Intergenic	novelGene_18738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTTCATAGATTTGA	NA	False	NA	NA	False	NA	NA	NA	153196511	153202017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153196500_153202000
ES.22808.1	chr3	-	4004	6	NNC	ENSMUSG00000052544.10	novel	8169	5	NA	NA	12	2856	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.4594324645612	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAATTCTTTAGAATC	NA	False	NA	NA	False	AATAAA	-14	NA	153430799	152908146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153360034_153360126_153430681
ES.22808.10	chr3	-	8206	2	Intergenic	novelGene_18727	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153000800	152992536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152998781_152998838
ES.22808.11	chr3	-	2318	1	Intergenic	novelGene_18728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAGCCTTTCTGATTA	NA	False	NA	NA	False	NA	NA	NA	152998723	152996405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152996400_152998700
ES.22808.12	chr3	-	3507	1	Intergenic	novelGene_18729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCGCAATAACTTATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	153065692	153062185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153062200_153065700
ES.22808.13	chr3	-	1073	1	Intergenic	novelGene_18730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATCTCTCCTGTTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	153065692	153064619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153064600_153065700
ES.22808.14	chr3	-	852	1	Intergenic	novelGene_18731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGAGTCTTTCATAAC	NA	False	NA	NA	False	ATTAAA	-23	NA	153065693	153064841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153064800_153065700
ES.22808.15	chr3	-	226	1	Intergenic	novelGene_18732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTGT	NA	False	NA	2	True	NA	NA	NA	153065761	153065535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153065500_153065800
ES.22808.16	chr3	-	1588	2	Intergenic	novelGene_18734	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153104310	153102258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153102767_153103230
ES.22808.17	chr3	-	4234	1	NIC	ENSMUSG00000104908.2	novel	239	3	NA	NA	6761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCACAGTGTGGTGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	153177086	153172852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153172900_153177100
ES.22808.18	chr3	-	3397	1	Intergenic	novelGene_18739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCACGCAGTTCCCAAG	NA	False	NA	NA	False	AAAACA	-28	NA	153210865	153207468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153207500_153210900
ES.22808.19	chr3	-	12538	1	FSM	ENSMUSG00000052544.10	ENSMUST00000200576.2	866	1	-11642	-30	-11642	30	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153227021	153214483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153214500_153227000
ES.22808.2	chr3	-	3007	6	NNC	ENSMUSG00000052544.10	novel	8169	5	NA	NA	-14	1899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.4594324645612	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153430764	152909103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153365563_153365650_153430681
ES.22808.20	chr3	-	3579	1	Intergenic	novelGene_18740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGCAACTTTACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153304768	153301189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153301200_153304800
ES.22808.3	chr3	-	3026	6	NNC	ENSMUSG00000052544.10	novel	8169	5	NA	NA	9	1899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.4594324645612	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153430802	152909103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153280303_153280371_153430681
ES.22808.4	chr3	-	2474	4	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134272	1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.1881062574327	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCGTTGTTTTCTC	NA	False	NA	-6	True	AATAAA	-22	NA	153065692	152909105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_152931338_152931464_153065574
ES.22808.5	chr3	-	2351	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134274	1897	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCGTTGTTTTCTC	NA	False	NA	-6	True	AATAAA	-22	NA	153065694	152909105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_153065574
ES.22808.6	chr3	-	3056	6	NNC	ENSMUSG00000052544.10	novel	8169	5	NA	NA	0	1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.4594324645612	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCGTTGTTTTCTC	NA	False	NA	-6	True	AATAAA	-22	NA	153430811	152909105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153328344_153328435_153430681
ES.22808.7	chr3	-	2359	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-16461	1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.5	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCGTTGTTTTCTC	NA	False	NA	-6	True	AATAAA	-22	NA	152947881	152909105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_152911229_152912254_152912363_152947753
ES.22808.8	chr3	-	6538	1	Intergenic	novelGene_18725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCTCATTCTAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	152947925	152941387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152941400_152947900
ES.22808.9	chr3	-	1479	1	Intergenic	novelGene_18726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAATAAAACAATGTC	NA	False	NA	NA	False	AATAAA	-11	NA	152988684	152987205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_152987200_152988700
ES.22809.1	chr3	+	160	1	Intergenic	novelGene_18741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	153514530	153514690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153514500_153514700
ES.2281.1	chr10	+	345	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAAAAACATCAACTGCC	NA	False	NA	NA	False	TATAAA	-33	NA	7018865	7019210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7018900_7019200
ES.2281.2	chr10	+	174	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	7018865	7019039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7018900_7019000
ES.22810.1	chr3	+	221	2	Intergenic	novelGene_18742	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	153536261	153545048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153536310_153544875
ES.22810.2	chr3	+	223	1	Intergenic	novelGene_18743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	153544825	153545048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153544800_153545000
ES.22811.1	chr3	+	179	1	Intergenic	novelGene_18744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153595247	153595426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153595200_153595400
ES.22812.1	chr3	-	2643	1	Genic_Genomic	ENSMUSG00000005493.16	novel	NA	NA	NA	NA	-117	-46340	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAACATTGTAGCATGA	NA	False	NA	NA	False	NA	NA	NA	153611892	153609249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_-_153609200_153611900
ES.22812.2	chr3	-	2005	1	NIC	ENSMUSG00000005493.16	novel	3325	20	NA	NA	229	-46632	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATAGCTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	153611546	153609541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153609500_153611500
ES.22813.1	chr3	-	2576	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000200209.5	1169	9	-121	-1286	2	1001	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAACTGAGCGAAGACTT	6907	False	NA	NA	False	NA	NA	NA	153617839	153611922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ES.22813.10	chr3	-	4297	4	NIC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	638	junction_3	193.064755975812	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6163	False	NA	0	True	AATAAA	-17	NA	153618583	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615236_153615700
ES.22813.11	chr3	-	1944	8	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	357	junction_7	234.848887585187	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6156	False	NA	0	True	AATAAA	-17	NA	153618590	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.12	chr3	-	1377	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	5	-1	5	-1	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6105	False	NA	-1	True	AATAAA	-16	NA	153618641	153612924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.13	chr3	-	1887	9	NNC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	347.677203020273	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6163	False	NA	-1	True	AATAAA	-16	NA	153618583	153612924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618002
ES.22813.14	chr3	-	2767	8	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	357	junction_7	255.735593685257	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6157	False	NA	-1	True	AATAAA	-16	NA	153618589	153612924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153617670_153618570
ES.22813.15	chr3	-	1417	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	2	47	junction_7	320.255492141686	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6107	False	NA	-1	True	AATAAA	-16	NA	153618639	153612924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153615964_153616327_153616526_153617561_153617670_153618570
ES.22813.16	chr3	-	2987	6	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	357	junction_5	268.261812414663	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTATATAGCTTTT	6138	False	NA	-1	True	AATAAA	-16	NA	153618608	153612924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615236_153615700_153617670_153618570
ES.22813.17	chr3	-	1796	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_8	223.937735486898	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6107	False	NA	-2	True	AATAAA	-15	NA	153618639	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616526_153617561_153617670_153618570
ES.22813.18	chr3	-	3246	7	ISM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196956.5	1055	8	-872	-283	2	0	intron_retention	FALSE	canonical	3	355	junction_5	282.452749244109	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6156	False	NA	-2	True	AATAAA	-15	NA	153618590	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327
ES.22813.19	chr3	-	2203	8	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196956.5	1055	8	-865	-283	9	0	multi-exon	FALSE	canonical	3	355	junction_5	265.52827590696	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6163	False	NA	-2	True	AATAAA	-15	NA	153618583	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ES.22813.2	chr3	-	1425	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6156	False	NA	0	True	AATAAA	-17	NA	153618590	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.20	chr3	-	1716	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	318.769664123536	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6163	False	NA	-2	True	AATAAA	-15	NA	153618583	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618254
ES.22813.22	chr3	-	1656	9	NNC	ENSMUSG00000038975.15	novel	1129	9	NA	NA	344	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_8	373.085927602476	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	7420	False	NA	-2	True	AATAAA	-15	NA	153617326	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153615964_153616327_153616526_153616925
ES.22813.23	chr3	-	2457	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	357	junction_8	226.322191521291	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6158	False	NA	-2	True	AATAAA	-15	NA	153618588	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618570
ES.22813.24	chr3	-	1738	10	FSM	ENSMUSG00000038975.15	ENSMUST00000196565.5	1775	10	41	-4	3	0	multi-exon	FALSE	canonical	3	9	junction_9	304.412366517671	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618254
ES.22813.26	chr3	-	4664	4	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	654	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	426	junction_1	180.495613981799	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153614537_153614985_153615097_153615182_153615236_153615700
ES.22813.27	chr3	-	3770	6	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	1169	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	607	junction_3	197.944840801674	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6156	False	NA	-2	True	AATAAA	-15	NA	153618590	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615236_153615700_153615799_153615897
ES.22813.28	chr3	-	1457	10	NNC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	30	junction_9	313.525394249822	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6097	False	NA	-2	True	AATAAA	-15	NA	153618649	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617661_153618570
ES.22813.29	chr3	-	3178	7	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	9	junction_6	368.778916003734	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6160	False	NA	-2	True	AATAAA	-15	NA	153618586	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153617670_153618254
ES.22813.3	chr3	-	1468	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6097	False	NA	0	True	AATAAA	-17	NA	153618649	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.30	chr3	-	3356	5	NIC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	355	junction_3	296.414722137751	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6156	False	NA	-2	True	AATAAA	-15	NA	153618590	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153614553_153614985_153615236_153615897_153617670_153618570
ES.22813.31	chr3	-	3566	6	NNC	ENSMUSG00000038975.15	novel	1381	9	NA	NA	3	0	intron_retention	FALSE	canonical	1	30	junction_5	369.569695727342	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6157	False	NA	-2	True	AATAAA	-15	NA	153618589	153612925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153615097_153615182_153615236_153615700_153616004_153616327_153617661_153618570
ES.22813.32	chr3	-	1900	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	9	-1	intron_retention	FALSE	canonical	3	72	junction_8	301.791629274239	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6163	False	NA	-3	True	AATAAA	-45	NA	153618583	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ES.22813.33	chr3	-	1965	10	NNC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	304.412366517671	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6181	False	NA	-3	True	AATAAA	-45	NA	153618565	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618002
ES.22813.34	chr3	-	1438	10	NNC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	330.023942266521	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6157	False	NA	-3	True	AATAAA	-45	NA	153618589	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615816_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.35	chr3	-	1695	9	NNC	ENSMUSG00000038975.15	novel	1169	9	NA	NA	344	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	314.067966370338	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	7420	False	NA	-3	True	AATAAA	-45	NA	153617326	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153616925
ES.22813.36	chr3	-	4775	2	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	72	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6164	False	NA	-3	True	AATAAA	-45	NA	153618582	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153617670_153618550
ES.22813.37	chr3	-	2556	8	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	357	junction_7	239.534582736044	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6157	False	NA	-3	True	AATAAA	-45	NA	153618589	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153616004_153616327_153617670_153618570
ES.22813.38	chr3	-	1523	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	287.574145028528	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTGTGTATATAGCTT	6075	False	NA	-3	True	AATAAA	-45	NA	153618671	153612926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ES.22813.39	chr3	-	2088	7	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	357	junction_6	248.63493988845	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6107	False	NA	-4	True	AATAAA	-44	NA	153618639	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615236_153615700_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.41	chr3	-	2920	8	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	357	junction_7	235.777653819899	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6158	False	NA	-4	True	AATAAA	-44	NA	153618588	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615799_153615897_153616004_153616327_153617670_153618570
ES.22813.42	chr3	-	2862	7	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	426	junction_3	210.342907864489	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6164	False	NA	-4	True	AATAAA	-44	NA	153618582	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153616004_153616327_153616526_153617561
ES.22813.44	chr3	-	5197	2	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	638	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153615236_153615700
ES.22813.45	chr3	-	1265	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_6	355.078072400986	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6158	False	NA	-4	True	AATAAA	-44	NA	153618588	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153615964_153616327_153616526_153617561_153617670_153618570
ES.22813.46	chr3	-	4764	3	ISM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-25	0	3	0	intron_retention	FALSE	canonical	3	1001	junction_2	40.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613379_153613691_153613842_153614426
ES.22813.47	chr3	-	4211	3	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	357	junction_2	322	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6122	False	NA	-4	True	AATAAA	-44	NA	153618624	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613842_153614426_153617670_153618570
ES.22813.48	chr3	-	3651	4	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	355	junction_2	310.221784463238	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153615236_153615897_153616526_153617561
ES.22813.49	chr3	-	4612	3	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	638	junction_2	181.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613842_153614426_153615236_153615700
ES.22813.5	chr3	-	1682	9	NNC	ENSMUSG00000038975.15	novel	1271	9	NA	NA	344	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	328.327556527015	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	7420	False	NA	0	True	AATAAA	-17	NA	153617326	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153616925
ES.22813.50	chr3	-	1889	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	72	junction_8	319.4856951023	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ES.22813.51	chr3	-	1506	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	357	junction_8	253.478795957374	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6154	False	NA	-4	True	AATAAA	-44	NA	153618592	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.53	chr3	-	5098	3	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	638	junction_1	25	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6157	False	NA	-4	True	AATAAA	-44	NA	153618589	153612927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153615236_153615700_153615799_153615897
ES.22813.54	chr3	-	3121	8	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	-25	0	intron_retention	FALSE	canonical	3	357	junction_7	223.618753548926	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTTGTGTATATAG	6075	False	NA	-6	True	AATAAA	-42	NA	153618671	153612929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618570
ES.22813.55	chr3	-	5347	2	ISM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-25	2	3	0	intron_retention	FALSE	canonical	3	1082	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTTGTGTATATAG	6157	False	NA	-6	True	AATAAA	-42	NA	153618589	153612929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613379_153613691
ES.22813.56	chr3	-	5657	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	-1261	-4315	-1261	4315	mono-exon	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGCTGTTGTGTATAT	6158	False	NA	-8	True	AATAAA	-40	NA	153618588	153612931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153612900_153618600
ES.22813.57	chr3	-	2464	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	72	junction_8	299.501565104425	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGGCTGTTGTGTATA	6164	False	NA	-9	True	AATAAA	-39	NA	153618582	153612932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618550
ES.22813.58	chr3	-	2445	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	10	-6	intron_retention	FALSE	canonical	3	72	junction_8	314.889836887442	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	6164	False	NA	-12	True	AATAAA	-36	NA	153618582	153612935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618550
ES.22813.59	chr3	-	1402	10	NNC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	2	45	junction_9	309.811212925422	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	6162	False	NA	-12	True	AATAAA	-36	NA	153618584	153612935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617661_153618550
ES.22813.6	chr3	-	3752	6	NIC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	426	junction_3	242.133847282861	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6160	False	NA	0	True	AATAAA	-17	NA	153618586	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615236_153615700_153615799_153615897
ES.22813.60	chr3	-	2615	8	FSM	ENSMUSG00000038975.15	ENSMUST00000197438.5	1992	8	-635	12	9	-6	multi-exon	FALSE	canonical	3	426	junction_3	212.229275327704	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	6163	False	NA	-12	True	AATAAA	-36	NA	153618583	153612935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616526_153617561
ES.22813.61	chr3	-	1274	7	NIC	ENSMUSG00000038975.15	novel	1169	9	NA	NA	1242	-6	intron_retention	FALSE	canonical	3	607	junction_3	187.55147441584	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	8318	False	NA	-12	True	AATAAA	-36	NA	153616428	153612935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615236_153615700_153615799_153615897_153616004_153616327
ES.22813.63	chr3	-	1512	9	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	1169	9	NA	NA	2	-9	multi-exon	FALSE	non_canonical	0	0	junction_7	317.565249200853	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAAATCAGTGGCTGTTG	6907	False	NA	-15	True	AATAAA	-33	NA	153617839	153612938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616021_153616392_153616526_153617561
ES.22813.64	chr3	-	4519	4	ISM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000197829.5	654	7	-919	-761	3	-21	intron_retention	FALSE	canonical	3	426	junction_2	245.781745999711	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAATAAAGGTCAAAAT	6157	False	NA	-27	True	AATAAA	-21	NA	153618589	153612950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613842_153614426_153614537_153614985_153615097_153615182
ES.22813.65	chr3	-	3606	5	NIC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	3	-21	intron_retention	FALSE	canonical	3	688	junction_3	147.248726649842	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAATAAAGGTCAAAAT	6157	False	NA	-27	True	AATAAA	-21	NA	153618589	153612950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615799_153615897_153616526_153617561
ES.22813.67	chr3	-	1263	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGAGTCCAGTTTT	6156	False	NA	-24	True	AATAAA	-21	NA	153618590	153613085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.68	chr3	-	4644	2	NIC	ENSMUSG00000038975.15	novel	631	7	NA	NA	0	5	intron_retention	FALSE	canonical	3	357	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGAGTCCAGTTTT	6116	False	NA	-24	True	AATAAA	-21	NA	153618630	153613085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153617670_153618570
ES.22813.69	chr3	-	1246	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	-25	160	-25	5	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGAGTCCAGTTTT	6075	False	NA	-24	True	AATAAA	-21	NA	153618671	153613085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.7	chr3	-	2639	8	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	1169	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	607	junction_2	147.284397943404	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6156	False	NA	0	True	AATAAA	-17	NA	153618590	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ES.22813.70	chr3	-	2317	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	6	5	intron_retention	FALSE	canonical	3	357	junction_8	249.576015474244	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCTGAGTCCAGTTTT	6122	False	NA	-24	True	AATAAA	-21	NA	153618624	153613085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618570
ES.22813.72	chr3	-	5203	2	ISM	ENSMUSG00000038975.15	ENSMUST00000196565.5	1775	10	24	161	-14	0	intron_retention	FALSE	canonical	3	1082	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6140	False	NA	-29	True	AATAAA	-16	NA	153618606	153613090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613379_153613691
ES.22813.73	chr3	-	1327	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_9	287.574145028528	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	6107	False	NA	-29	True	AATAAA	-16	NA	153618639	153613090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ES.22813.75	chr3	-	5492	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	-1256	-4155	-1256	4155	mono-exon	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6163	False	NA	-30	True	AATAAA	-15	NA	153618583	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613100_153618600
ES.22813.76	chr3	-	4052	5	NIC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	426	junction_3	260.932342763407	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6157	False	NA	-30	True	AATAAA	-15	NA	153618589	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615799_153615897
ES.22813.77	chr3	-	1690	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	357	junction_8	220.762740289207	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6156	False	NA	-30	True	AATAAA	-15	NA	153618590	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.79	chr3	-	3349	5	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	1169	9	NA	NA	131	-1	intron_retention	FALSE	canonical	3	355	junction_4	295.462666846422	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6313	False	NA	-30	True	AATAAA	-15	NA	153618433	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615236_153615897
ES.22813.8	chr3	-	2505	9	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	357	junction_8	249.576015474244	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6096	False	NA	0	True	AATAAA	-17	NA	153618650	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618570
ES.22813.81	chr3	-	4907	2	ISM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000197829.5	654	7	-913	-620	9	-1	intron_retention	FALSE	canonical	3	1001	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6163	False	NA	-30	True	AATAAA	-15	NA	153618583	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613842_153614426
ES.22813.83	chr3	-	1314	10	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	240.631627694519	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6083	False	NA	-30	True	AATAAA	-15	NA	153618663	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ES.22813.84	chr3	-	5032	2	Fusion	ENSMUSG00000038975.15_ENSMUSG00000065463.3	novel	654	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	638	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6158	False	NA	-30	True	AATAAA	-15	NA	153618588	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr3_-_153615236_153615700
ES.22813.85	chr3	-	3489	5	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	357	junction_4	228.51367573955	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6116	False	NA	-30	True	AATAAA	-15	NA	153618630	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613842_153614426_153615236_153615700_153615799_153615897_153617670_153618570
ES.22813.86	chr3	-	3498	7	ISM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	-22	164	6	-1	intron_retention	FALSE	canonical	3	426	junction_3	224.218953009974	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6160	False	NA	-30	True	AATAAA	-15	NA	153618586	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897
ES.22813.87	chr3	-	1295	8	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000196956.5	1055	8	-123	-117	0	-1	multi-exon	FALSE	canonical	3	355	junction_5	265.52827590696	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAGTCTTCTGAGTCC	6905	False	NA	-30	True	AATAAA	-15	NA	153617841	153613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ES.22813.89	chr3	-	3154	6	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	72	junction_5	356.321427927089	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTAGTCTTCTGAGTC	6157	False	NA	-31	True	AATAAA	-14	NA	153618589	153613092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153615236_153615700_153615799_153615897_153617670_153618550
ES.22813.9	chr3	-	2407	9	FSM	ENSMUSG00000038975.15_ENSMUSG00000065463.3	ENSMUST00000200209.5	1169	9	-953	-285	-25	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6075	False	NA	0	True	AATAAA	-17	NA	153618671	153612923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ES.22813.90	chr3	-	1171	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	72	junction_8	331.806584285183	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTAGTCTTCTGAGTC	6163	False	NA	-31	True	AATAAA	-14	NA	153618583	153613092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ES.22813.91	chr3	-	1527	9	NNC	ENSMUSG00000038975.15	novel	1169	9	NA	NA	345	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	314.067966370338	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTAGTCTTCTGAGT	7421	False	NA	-32	True	AATAAA	-13	NA	153617325	153613093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153616925
ES.22813.92	chr3	-	2305	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	72	junction_8	299.501565104425	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTAGTCTTCTGAGT	6162	False	NA	-32	True	AATAAA	-13	NA	153618584	153613093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153617670_153618550
ES.22813.93	chr3	-	2684	7	NIC	ENSMUSG00000038975.15	novel	1399	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	357	junction_6	268.709053728295	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTAGTCTTCTGAGT	6157	False	NA	-32	True	AATAAA	-13	NA	153618589	153613093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615236_153615700_153615799_153615897_153617670_153618570
ES.22813.94	chr3	-	911	5	NNC	ENSMUSG00000038975.15	novel	1992	8	NA	NA	-58	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	441.709958570101	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTAGTCTTCTGAGT	6906	False	NA	-32	True	AATAAA	-13	NA	153617840	153613093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615073_153617561
ES.22813.98	chr3	-	80	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	2	-1	2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTTTACCTAAACTT	7421	False	NA	NA	False	NA	NA	NA	153617325	153617245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153617200_153617300
ES.22814.1	chr3	+	157	1	Intergenic	novelGene_18746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	153624914	153625071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153624900_153625100
ES.22815.1	chr3	+	153	1	Intergenic	novelGene_18747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	153625103	153625256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153625100_153625300
ES.22816.1	chr3	+	200	1	Intergenic	novelGene_18748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCACGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	153626543	153626743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153626500_153626700
ES.22817.1	chr3	+	155	1	Intergenic	novelGene_18749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	2816	False	NA	NA	False	NA	NA	NA	153633742	153633897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153633700_153633900
ES.22818.1	chr3	+	173	1	Intergenic	novelGene_18751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTATAGAATAG	5715	False	NA	NA	False	NA	NA	NA	153636641	153636814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153636600_153636800
ES.22819.1	chr3	-	159	2	Intergenic	novelGene_18745	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	384	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	153636413	153624090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153624101_153636264
ES.22819.10	chr3	-	1912	12	NNC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	282.594912016336	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCTGACTCTCCAG	158	False	NA	-7	True	AATAAA	-15	NA	153650103	153627994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644636_153644706_153644805_153647519_153647608_153650032
ES.22819.11	chr3	-	1803	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	283.374398984806	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCTGACTCTCCAG	154	False	NA	-7	True	AATAAA	-15	NA	153650107	153627994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.15	chr3	-	1754	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	284.528662879507	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTCTGACTCTCCA	182	False	NA	-8	True	AATAAA	-14	NA	153650079	153627995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.16	chr3	-	4314	11	NNC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	-21	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	296.301889970348	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCTCTGACTCTCCA	136	False	NA	-8	True	AATAAA	-14	NA	153650125	153627995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153636231_153636589_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644805_153647519_153647608_153650032
ES.22819.17	chr3	-	6054	10	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	875	junction_9	60.8296548862497	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTCTCTGACTCTCC	NA	False	NA	-9	True	AATAAA	-13	NA	153650287	153627996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153643421_153644190_153644292_153644533_153644604_153644706_153647608_153650032
ES.22819.18	chr3	-	1356	9	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	190	7370	0	397	5prime_fragment	FALSE	canonical	3	875	junction_8	66.6679036343577	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGTCTGTGTACTCC	182	False	NA	NA	False	AATAAA	-34	NA	153650079	153635363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.19	chr3	-	158	1	Intergenic	novelGene_18750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	153636412	153636254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153636300_153636400
ES.22819.2	chr3	-	2066	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	-18	-1	-18	1	multi-exon	TRUE	canonical	3	875	junction_11	59.2580851965116	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGACTCTCCAGGT	NA	False	NA	-5	True	AATAAA	-17	NA	153650287	153627992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.20	chr3	-	747	7	ISM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	191	13806	1	142	5prime_fragment	FALSE	canonical	3	875	junction_6	68.3213404109986	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTTAAGCCCTTGAG	183	False	NA	NA	False	TATAAA	-18	NA	153650078	153641799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.21	chr3	-	462	2	FSM	ENSMUSG00000062908.13	ENSMUST00000135724.2	437	2	-23	-2	-19	2	multi-exon	FALSE	canonical	3	875	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAACTGTAACATACTT	138	False	NA	NA	False	AATAAA	-30	NA	153650123	153647236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_153647608_153650032
ES.22819.3	chr3	-	1995	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	875	junction_10	61.0908340096941	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	147	False	NA	-6	True	AATAAA	-16	NA	153650114	153627993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644805_153647519_153647608_153650032
ES.22819.4	chr3	-	4238	8	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	875	junction_7	34.1795976857421	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCTGACTCTCCAG	192	False	NA	-7	True	AATAAA	-15	NA	153650069	153627994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153644805_153647519_153647608_153650032
ES.22819.8	chr3	-	1961	13	NNC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	362.032188562779	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCTGACTCTCCAG	179	False	NA	-7	True	AATAAA	-15	NA	153650082	153627994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153628640_153631301_153631551_153632787_153632890_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ES.22819.9	chr3	-	1839	12	NNC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	282.954366557081	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCTGACTCTCCAG	183	False	NA	-7	True	AATAAA	-15	NA	153650078	153627994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647597_153650037
ES.2282.1	chr10	+	3696	2	Antisense	novelGene_ENSMUSG00000015202.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATCTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	7098330	7102191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_7099515_7099679
ES.22820.1	chr3	-	329	1	Intergenic	novelGene_18752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	153659770	153659441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153659400_153659800
ES.22820.2	chr3	-	200	1	Intergenic	novelGene_18753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGAGGACTTAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	153659771	153659571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153659600_153659800
ES.22821.1	chr3	-	231	1	Intergenic	novelGene_18754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTACCCAATC	NA	False	NA	NA	False	NA	NA	NA	153814674	153814443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_153814400_153814700
ES.22822.1	chr3	+	1513	7	NNC	ENSMUSG00000028360.11	novel	4098	22	NA	NA	-47921	18498	intron_retention	FALSE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACACATTTGAAGGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	153880197	153949660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_153880367_153910694_153910769_153928396_153928482_153939689_153939775_153944711_153944838_153945921_153945983_153948747
ES.22822.2	chr3	+	134	1	Intergenic	novelGene_18755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	153891906	153892040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_153891900_153892000
ES.22823.1	chr3	-	6281	7	NIC	ENSMUSG00000096225.8	novel	1729	9	NA	NA	135	1	intron_retention	FALSE	canonical	0	0	junction_1	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCCACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	154034136	154011929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_154017361_154022379_154022476_154027263_154027368_154027877_154028099_154030178_154030301_154033641_154033804_154033991
ES.22824.1	chr3	+	1390	2	Antisense	novelGene_ENSMUSG00000047583.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154288014	154289642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_154289138_154289375
ES.22825.1	chr3	+	2382	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	168	-43	168	43	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTGACCCTGTGGC	NA	False	NA	61	True	NA	NA	NA	154302515	154328862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.10	chr3	+	2036	9	NIC	ENSMUSG00000028199.19	novel	641	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	59.7280294334243	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGTCTGTCTCGTG	NA	False	NA	16	True	AGTAAA	-16	NA	154303050	154328817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_154303156_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.11	chr3	+	3979	1	FSM	ENSMUSG00000028199.19	ENSMUST00000195292.2	3476	1	-503	0	-503	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6925	False	NA	NA	False	NA	NA	NA	154321017	154324996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154321000_154325000
ES.22825.2	chr3	+	1526	9	FSM	ENSMUSG00000028199.19	ENSMUST00000194876.6	1059	9	25	-492	25	489	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTCCTCTACTGACC	NA	False	NA	NA	False	AATAAA	-13	NA	154302805	154328296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.3	chr3	+	2273	9	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	25	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	60.9625909882446	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCCTTGTCTGTCTCG	NA	False	NA	14	True	AGTAAA	-14	NA	154302805	154328815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_154303150_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.4	chr3	+	1222	9	FSM	ENSMUSG00000028199.19	ENSMUST00000194876.6	1059	9	25	-188	25	185	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGTAGACACAGTGAGT	NA	False	NA	NA	False	ATTAAA	-12	NA	154302805	154327992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.5	chr3	+	1740	6	NIC	ENSMUSG00000028199.19	novel	641	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	18	junction_1	72.8104388120275	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154302817	154324996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_154303165_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096
ES.22825.6	chr3	+	2123	9	NIC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	62.745019722684	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCCTTGTCTGTCTCG	NA	False	NA	14	True	AGTAAA	-14	NA	154302827	154328815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_154302922_154310528_154310753_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.7	chr3	+	4950	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	501	-2944	-10	2944	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCCTGACTAGCTCG	NA	False	NA	NA	False	NA	NA	NA	154302848	154331763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ES.22825.8	chr3	+	1156	9	NNC	ENSMUSG00000028199.19	novel	2505	9	NA	NA	5	46403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.4014984050062	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCCTGGAACGTGGAG	NA	False	NA	NA	False	AATAAA	-12	NA	154302863	154375222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154374971
ES.22825.9	chr3	+	1543	6	NIC	ENSMUSG00000028199.19	novel	641	6	NA	NA	-9	30	intron_retention	FALSE	canonical	3	7	junction_1	77.1014915549628	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAGCCAGAGCTCTGA	NA	False	NA	NA	False	NA	NA	NA	154303029	154325026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_154303150_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096
ES.22826.1	chr3	-	3129	6	NNC	ENSMUSG00000047583.10	novel	4490	6	NA	NA	15	67085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8974925326343	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACAAATGTCTACATTA	NA	False	NA	NA	False	AATAAA	-15	NA	154302717	154214982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154217557_154254539_154254627_154270918_154270979_154299353_154299453_154300090_154300172_154302489
ES.22826.10	chr3	-	2629	6	Antisense	novelGene_ENSMUSG00000028199.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCGGCAGACAAGAGT	4521	False	NA	NA	False	NA	NA	NA	154326038	154302972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_154303167_154310528_154310649_154312011_154312167_154317044_154317208_154319455_154319511_154324096
ES.22826.11	chr3	-	1597	2	Antisense	novelGene_ENSMUSG00000028199.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTGCTACCTAGG	NA	False	NA	NA	False	AATAAA	-16	NA	154337985	154309359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_154310745_154337773
ES.22826.2	chr3	-	685	1	Intergenic	novelGene_18756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAGTGCTTCAGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	154278584	154277899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_154277900_154278600
ES.22826.3	chr3	-	4166	4	NIC	ENSMUSG00000047583.10	novel	4270	5	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.6904675198546	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTCTGTTCTGTTGC	NA	False	NA	0	True	AATAAA	-18	NA	154302705	154282158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_154285929_154299353_154299453_154300090_154300172_154302489
ES.22826.4	chr3	-	4425	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-27	92	-18	-3	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTGTCTGTTCTGTTG	NA	False	NA	-1	True	AATAAA	-17	NA	154302759	154282159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ES.22826.5	chr3	-	1091	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	-7	3406	2	8	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGGAAAAGCAAGGTTA	NA	False	NA	-7	True	AATAAA	-29	NA	154302739	154285473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ES.22826.6	chr3	-	955	6	NNC	ENSMUSG00000047583.10	novel	4490	6	NA	NA	27	8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	27.3744406335545	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGGAAAAGCAAGGTTA	NA	False	NA	-7	True	AATAAA	-29	NA	154302705	154285473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154285827_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ES.22826.7	chr3	-	943	5	FSM	ENSMUSG00000047583.10	ENSMUST00000170461.8	4270	5	-2	3329	-2	-4	multi-exon	FALSE	canonical	3	5	junction_1	28.314086600136	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATTTATGTCAAATAGGA	NA	False	NA	-19	True	AATAAA	-17	NA	154302737	154285485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154285929_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ES.22826.8	chr3	-	4787	7	NNC	ENSMUSG00000047583.10	novel	488	4	NA	NA	-35274	3501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.038605185342	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGAGTCTGTTTGCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	154338015	154289690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154292913_154292955_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489_154303269_154337773
ES.22826.9	chr3	-	2367	1	Antisense	novelGene_ENSMUSG00000028199.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCGGCAGACAAGAGT	NA	False	NA	NA	False	NA	NA	NA	154305339	154302972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_154303000_154305300
ES.22827.1	chr3	-	3677	4	NNC	ENSMUSG00000053870.8	novel	875	4	NA	NA	-13	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.4988888395018	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTTTTTTATAGAT	NA	False	NA	NA	False	NA	NA	NA	154798847	154790547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154795767_154795842_154797027_154797196_154798571
ES.22827.10	chr3	-	4129	3	NNC	ENSMUSG00000053870.8	novel	3518	4	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTTGTAAAGTAGAAATT	NA	False	NA	NA	False	NA	NA	NA	154799003	154790565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154796275_154797196_154798935
ES.22827.11	chr3	-	3610	4	FSM	ENSMUSG00000053870.8	ENSMUST00000194095.2	875	4	-162	-2573	9	-228	multi-exon	FALSE	canonical	3	7	junction_3	10.0332779621949	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTATATTATTTATAT	NA	False	NA	NA	False	CATAAA	-31	NA	154798996	154790782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798571
ES.22827.12	chr3	-	1886	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	37	1595	2	1206	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTGTAGCTTGGTA	NA	False	NA	NA	False	AATAAA	-26	NA	154799003	154792149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
ES.22827.2	chr3	-	3508	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	12	-2	12	2	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTTTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	154799028	154790552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
ES.22827.3	chr3	-	3847	4	FSM	ENSMUSG00000053870.8	ENSMUST00000194095.2	875	4	-169	-2803	2	2	multi-exon	FALSE	canonical	3	7	junction_3	10.0332779621949	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTTTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	154799003	154790552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798571
ES.22827.4	chr3	-	3570	5	NNC	ENSMUSG00000053870.8	novel	3518	4	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.8270568090248	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTTTGTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	154798997	154790552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154795748_154795842_154797027_154797196_154797786_154797880_154798935
ES.22827.5	chr3	-	6729	2	FSM	ENSMUSG00000053870.8	ENSMUST00000192959.2	686	2	-17	-6026	-17	1	multi-exon	FALSE	canonical	3	25	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAATTTTTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	154799022	154790553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_154797196_154798935
ES.22827.6	chr3	-	4240	4	NNC	ENSMUSG00000053870.8	novel	3518	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.0277457017791	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAATTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	154799007	154790554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154795748_154795845_154796275_154797196_154798935
ES.22827.7	chr3	-	4353	5	NNC	ENSMUSG00000053870.8	novel	3518	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.4522724801834	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAATTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	154798997	154790554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154795748_154795842_154796223_154797196_154798571_154798646_154798935
ES.22827.8	chr3	-	3378	4	NNC	ENSMUSG00000053870.8	novel	3518	4	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.2565175405668	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGAAATTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	154798996	154790556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_154793707_154795748_154795842_154798571_154798646_154798935
ES.22828.1	chr3	+	961	3	FSM	ENSMUSG00000028182.15	ENSMUST00000195418.6	2148	3	-13	1200	-13	-1200	multi-exon	FALSE	canonical	2	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGACTTTATAGCTGA	2772	False	NA	NA	False	TATAAA	-22	NA	154799057	154807063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_154799308_154804341_154804591_154806601
ES.22828.2	chr3	+	1649	4	NNC	ENSMUSG00000028182.15	novel	1340	6	NA	NA	-4	1686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.16024689946929	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACAATGTACCTTATTG	2781	False	NA	NA	False	AATATA	-17	NA	154799066	154809949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_154799308_154804341_154804591_154806601_154806926_154809114
ES.22829.1	chr3	-	144	1	Intergenic	novelGene_18757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157188136	157187992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_157188000_157188100
ES.2283.1	chr10	-	3475	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	-24	-4	-24	4	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTTTATGAATTTGTG	NA	False	NA	0	True	AATAAA	-15	NA	7162261	7069058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ES.2283.2	chr10	-	3254	12	NIC	ENSMUSG00000015202.14	novel	3447	13	NA	NA	33	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	14.80841842326	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTTTATGAATTTGTG	NA	False	NA	0	True	AATAAA	-15	NA	7162204	7069058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7161631
ES.2283.3	chr10	-	3334	14	NNC	ENSMUSG00000015202.14	novel	3447	13	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.9419761233784	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATTTTATGAATTTG	NA	False	NA	-2	True	AATAAA	-13	NA	7162212	7069060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7070587_7076094_7076185_7076634_7076713_7076802_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ES.2283.4	chr10	-	4809	2	ISM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	6129	-2	6129	2	intron_retention	FALSE	canonical	3	59	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGATTTTATGAATTTG	NA	False	NA	-2	True	AATAAA	-13	NA	7079377	7069060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_7070587_7076094
ES.2283.5	chr10	-	3188	11	NIC	ENSMUSG00000015202.14	novel	3447	13	NA	NA	-25197	1	intron_retention	FALSE	canonical	3	41	junction_9	5.40462764674866	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGATTTTATGAATTT	NA	False	NA	-3	True	AATAAA	-12	NA	7110703	7069061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7070587_7076094_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643
ES.2283.6	chr10	-	2393	5	NIC	ENSMUSG00000015202.14	novel	3447	13	NA	NA	193	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.2955394390469	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGATTTTATGAATTT	NA	False	NA	-3	True	AATAAA	-12	NA	7162044	7069061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7070587_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ES.2283.7	chr10	-	3304	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	1	142	1	-142	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAAATGTTTCTGTTTT	NA	False	NA	NA	False	AATAGA	-33	NA	7162236	7069204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ES.22830.1	chr3	+	176	1	Intergenic	novelGene_18758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAATACTTGAATGC	NA	False	NA	NA	False	NA	NA	NA	157238799	157238975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_157238800_157239000
ES.22831.10	chr3	+	3909	10	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-29	3	intron_retention	FALSE	canonical	3	115	junction_9	232.964523341651	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157239767	157253976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157251787_157252311
ES.22831.11	chr3	+	6391	7	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-20	4	intron_retention	FALSE	canonical	3	697	junction_6	87.5355483345036	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGTTGTTTATTAGA	NA	False	NA	15	True	AATAAA	-16	NA	157239776	157253977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157250760_157252311
ES.22831.12	chr3	+	1458	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-20	1486	-20	1	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTTCCCCAGATAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	157239776	157252561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.13	chr3	+	2695	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	265.805693442911	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157239776	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157239937_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.14	chr3	+	5920	8	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-13	10	intron_retention	FALSE	canonical	3	697	junction_7	81.7267722727531	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTTCTAAACTCAT	NA	False	NA	13	True	AATAAA	-21	NA	157239783	157254023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157250760_157252311
ES.22831.15	chr3	+	1283	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-10	1651	-10	-44	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGAGTACAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	157239786	157252396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.16	chr3	+	1352	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-232	1617	-4	-44	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGAGTACAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	157239792	157252396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
ES.22831.17	chr3	+	2808	10	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	2	43	junction_7	253.160906232468	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157239793	157253976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247459_157248794_157248882_157250600_157250760_157252311
ES.22831.18	chr3	+	2537	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-3	390	-3	-316	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTCCTTGCTGCATT	NA	False	NA	NA	False	NA	NA	NA	157239793	157253657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.19	chr3	+	1803	11	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	253.727038369977	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157239798	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311_157252347_157253391
ES.22831.2	chr3	+	2982	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-281	36	-53	4	multi-exon	TRUE	canonical	3	77	junction_9	297.644569915193	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGTTGTTTATTAGA	NA	False	NA	15	True	AATAAA	-16	NA	157239743	157253977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
ES.22831.20	chr3	+	2661	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	264.539198710363	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157239994	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248891_157250600_157250760_157252311
ES.22831.22	chr3	+	2640	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	265.985983107901	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157240000	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247501_157248794_157248882_157250600_157250760_157252311
ES.22831.23	chr3	+	8720	5	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	5	5	intron_retention	FALSE	canonical	3	775	junction_4	77.6868714777471	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGTTGTTTATTAGAA	NA	False	NA	16	True	AATAAA	-17	NA	157240000	157253978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157243307_157246269_157246347_157246691
ES.22831.24	chr3	+	2631	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	266.640183870175	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157240006	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247345_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.25	chr3	+	2629	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	253.249303802682	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTATCAAGTGTTGTTT	NA	False	NA	9	True	AATAAA	-10	NA	157240006	157253971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246278_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.26	chr3	+	4362	9	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-6	3	intron_retention	FALSE	canonical	3	697	junction_8	76.4925445713502	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTGTTGTTTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	157240006	157253976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157250760_157252311
ES.22831.28	chr3	+	6726	8	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-5	11	intron_retention	FALSE	non_canonical	0	0	junction_2	363.666139782754	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTTCTAAACTCATA	NA	False	NA	14	True	AATAAA	-22	NA	157240007	157254024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242112_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157251787_157252311
ES.22831.29	chr3	+	7248	7	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	-17	-10	-5	10	intron_retention	FALSE	canonical	3	775	junction_5	69.3511595673305	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTTCTAAACTCAT	NA	False	NA	13	True	AATAAA	-21	NA	157240007	157254023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
ES.22831.3	chr3	+	4493	9	ISM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-41	24	-41	10	intron_retention	FALSE	canonical	3	697	junction_8	76.4925445713502	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTTCTAAACTCAT	NA	False	NA	13	True	AATAAA	-21	NA	157239755	157254023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600
ES.22831.30	chr3	+	5386	9	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-5	1	intron_retention	FALSE	canonical	3	115	junction_8	246.530645914458	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATCAAGTGTTGTTTATT	NA	False	NA	12	True	AATAAA	-13	NA	157240007	157253974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157251787_157252311
ES.22831.31	chr3	+	5480	8	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-4	2	intron_retention	FALSE	canonical	3	697	junction_7	81.7267722727531	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAAGTGTTGTTTATTA	NA	False	NA	13	True	AATAAA	-14	NA	157240008	157253975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157248882_157250600
ES.22831.32	chr3	+	2578	9	FSM	ENSMUSG00000028180.19	ENSMUST00000184802.8	2542	9	18	-54	1	14	multi-exon	FALSE	canonical	1	1	junction_2	274.019815661204	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTCTAAACTCATAATA	NA	False	NA	17	True	AATAAA	-25	NA	157240013	157254027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.33	chr3	+	2406	9	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	282.031802284778	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157240013	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247406_157250639_157250760_157252311
ES.22831.34	chr3	+	2527	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	217	180	1	-106	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACAGTTCAGATGATTA	NA	False	NA	-95	True	TATAAA	-19	NA	157240013	157253867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.36	chr3	+	3790	9	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	1	-44	intron_retention	FALSE	canonical	3	115	junction_8	246.530645914458	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGAGTACAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	157240025	157252396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157251787_157252311
ES.22831.38	chr3	+	2642	10	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	266.026314487872	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCAAGTGTTGTTTAT	NA	False	NA	11	True	AATAAA	-12	NA	157240034	157253973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242084_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.39	chr3	+	5634	7	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	10	1577	10	-4	intron_retention	FALSE	canonical	3	775	junction_5	69.3511595673305	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTCTCATTTGGT	NA	False	NA	NA	False	TTTAAA	-38	NA	157240034	157252436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336
ES.22831.4	chr3	+	2673	10	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-41	-44	intron_retention	FALSE	canonical	1	14	junction_8	323.479615630406	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGAGTACAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	157239755	157252396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157248882_157250600_157250760_157251715_157251787_157252311
ES.22831.40	chr3	+	4313	8	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	10	1610	10	-37	intron_retention	FALSE	canonical	3	775	junction_5	64.9766048949425	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTACAGTGCATGAAG	NA	False	NA	NA	False	ATTAAA	-20	NA	157240034	157252403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794
ES.22831.42	chr3	+	5923	8	ISM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	12	-2	12	2	intron_retention	FALSE	canonical	3	775	junction_5	64.9766048949425	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTGACTGAATGTTCT	NA	False	NA	5	True	AATAAA	-13	NA	157240036	157254015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794
ES.22831.44	chr3	+	2630	10	NNC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	267.564230202676	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTGACTGAATGTTC	NA	False	NA	4	True	AATAAA	-12	NA	157240045	157254014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250748_157252311
ES.22831.45	chr3	+	4027	3	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	1419	4	intron_retention	FALSE	canonical	3	115	junction_2	291	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGTTGTTTATTAGA	NA	False	NA	15	True	AATAAA	-16	NA	157247706	157253977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157248882_157250600_157251787_157252311
ES.22831.5	chr3	+	3044	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	-41	-79	-41	79	multi-exon	FALSE	canonical	3	697	junction_8	81.8057017542553	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTTTTCATTTATGTA	NA	False	NA	116	True	NA	NA	NA	157239755	157254126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.6	chr3	+	3137	11	NNC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	-39	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	331.897936118922	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATGTTCTAAACTCAT	NA	False	NA	13	True	AATAAA	-21	NA	157239757	157254023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157240112_157240508_157240707_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ES.22831.8	chr3	+	4227	9	NIC	ENSMUSG00000028180.19	novel	2924	10	NA	NA	-35	14	intron_retention	FALSE	canonical	3	697	junction_7	86.7308156020684	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTCTAAACTCATAATA	NA	False	NA	17	True	AATAAA	-25	NA	157239761	157254027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157248882_157250600_157250760_157252311
ES.22832.1	chr3	+	177	1	Intergenic	novelGene_18759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAGAAACATTACAT	NA	False	NA	NA	False	NA	NA	NA	157268351	157268528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_157268400_157268500
ES.22833.1	chr3	+	178	1	Intergenic	novelGene_18760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	157400301	157400479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_157400300_157400500
ES.22834.1	chr3	+	167	1	Intergenic	novelGene_18761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAATGGCAT	NA	False	NA	NA	False	NA	NA	NA	157467610	157467777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_157467600_157467800
ES.22835.1	chr3	-	5832	11	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-14	15	intron_retention	TRUE	non_canonical	0	0	junction_7	322.467130107861	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTGTTTCTGGGTTC	NA	False	NA	-1	True	AATAAA	-33	NA	157630728	157599869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157617310_157617461_157619369_157624062_157625750_157626591_157626674_157630502
ES.22835.11	chr3	-	2194	2	ISM	ENSMUSG00000028179.13	ENSMUST00000129805.2	675	3	-1094	-174	-1094	-1	intron_retention	FALSE	canonical	3	1063	junction_1	0	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	157604443	157599885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_157600465_157602828
ES.22835.12	chr3	-	3700	11	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-12	-7	intron_retention	FALSE	canonical	3	948	junction_5	63.8473961880984	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTACCTGGCCCTGATC	NA	False	NA	-23	True	AATAAA	-42	NA	157630700	157599891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.13	chr3	-	1587	10	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-12	-36	combination_of_known_splicesites	FALSE	canonical	1	8	junction_9	330.906200576911	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTTTCTTAAATAAAT	NA	False	NA	-52	True	AATAAA	-13	NA	157630700	157599920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157630502
ES.22835.15	chr3	-	2778	11	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-10	-36	intron_retention	FALSE	canonical	3	948	junction_4	63.9438034527193	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTTTCTTAAATAAAT	NA	False	NA	-52	True	AATAAA	-13	NA	157630698	157599920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.16	chr3	-	1969	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-12	-36	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	307.320491177404	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTTTCTTAAATAAAT	NA	False	NA	-52	True	AATAAA	-13	NA	157630700	157599920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616782_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.17	chr3	-	1748	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-10	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	405.258228053372	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTTTTCTTAAATAAAT	NA	False	NA	-52	True	AATAAA	-13	NA	157630698	157599920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612969_157613110_157614535_157614614_157616519_157616576_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.18	chr3	-	3986	11	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	948	junction_4	63.7577446276137	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGGTTTTTTTTTGA	NA	False	NA	-18	True	ATTAAA	-19	NA	157630696	157600059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.19	chr3	-	1625	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	14	176	-12	-1	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGTGGTTTTTTTTTG	NA	False	NA	-19	True	ATTAAA	-18	NA	157630700	157600060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.2	chr3	-	1854	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	-25	-14	-25	14	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGCTGTTTCTGGGTT	NA	False	NA	-2	True	AATAAA	-32	NA	157630739	157599870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.20	chr3	-	3579	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	306.927966890448	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCACTGTGGTGGTTTT	NA	False	NA	-25	True	ATTAAA	-12	NA	157630698	157600066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157602427_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.21	chr3	-	1680	13	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	394.4860492534	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCACTGTGGTGGTTTT	NA	False	NA	-25	True	ATTAAA	-12	NA	157630698	157600066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157627069_157627133_157630502
ES.22835.22	chr3	-	1743	13	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	393.93322897274	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATCCACTGTGGTGGT	NA	False	NA	-28	True	ATTAAA	-9	NA	157630700	157600069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157626896_157627024_157630502
ES.22835.23	chr3	-	1496	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-8	282	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	402.370434975221	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGTAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	157630722	157602656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157602968_157609356_157609438_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.24	chr3	-	1870	1	Intergenic	novelGene_18762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	157607063	157605193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_157605200_157607100
ES.22835.25	chr3	-	2848	1	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-71	-5647	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCACTTCTATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	157611433	157608585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157608600_157611400
ES.22835.3	chr3	-	3296	11	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	948	junction_5	60.2083881199289	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCCTGATCCTACTTTG	NA	False	NA	-15	True	AATAAA	-19	NA	157630713	157599883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157625750_157626591_157626674_157630502
ES.22835.4	chr3	-	3697	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-6	1	intron_retention	TRUE	non_canonical	0	0	junction_1	307.677543987825	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCCTGATCCTACTTTG	NA	False	NA	-15	True	AATAAA	-19	NA	157630720	157599883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157599891_157599921_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.5	chr3	-	6110	11	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_1	417.370818337842	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630700	157599884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157602968_157604765_157604805_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ES.22835.6	chr3	-	1647	7	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-8397	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_6	396.697512806252	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	157619759	157599885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157619236
ES.22835.7	chr3	-	1531	9	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	351.024838864716	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	157630719	157599885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157630502
ES.22835.8	chr3	-	1788	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	308.535034912723	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	157630698	157599885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624163_157625653_157625750_157626591_157626674_157630502
ES.22835.9	chr3	-	3845	12	NNC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	1	junction_10	408.182243368882	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCCTGATCCTACTT	NA	False	NA	-17	True	AATAAA	-17	NA	157630695	157599885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157627733_157627878_157630502
ES.22836.1	chr3	-	214	1	Antisense	novelGene_ENSMUSG00000028177.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGGTTCGACTTCCCA	NA	False	NA	NA	False	NA	NA	NA	157631385	157631171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157631200_157631400
ES.22837.1	chr3	-	172	1	Intergenic	novelGene_18763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	157649077	157648905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_157648900_157649100
ES.22838.10	chr3	+	3139	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-245	-4	intron_retention	FALSE	canonical	0	0	junction_10	95.6316355722426	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATGTATTAATGATT	NA	False	NA	NA	False	AATAAA	-13	NA	157652630	157712470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706693_157706810_157709345_157709447_157711376
ES.22838.11	chr3	+	1570	13	NNC	ENSMUSG00000039988.15	novel	722	5	NA	NA	-239	249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.0579365923032	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACACTCCTGGACCATT	NA	False	NA	NA	False	NA	NA	NA	157652636	157711796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652722_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.12	chr3	+	4292	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-233	0	intron_retention	FALSE	canonical	0	0	junction_7	96.3970377599275	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652642	157713671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697336_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.13	chr3	+	2216	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-233	73	intron_retention	FALSE	canonical	3	12	junction_12	93.9117123804173	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTGCCATTCATTC	NA	False	NA	NA	False	AATAAA	-13	NA	157652642	157711620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711420
ES.22838.15	chr3	+	4252	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-230	-1	intron_retention	FALSE	canonical	3	16	junction_8	93.0043308430073	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTGCCTATTAATC	NA	False	NA	14	True	AATAAA	-22	NA	157652645	157713670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700288_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.17	chr3	+	4214	12	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-149	-14	intron_retention	FALSE	canonical	1	1	junction_5	132.724906579158	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGACTTTTCATGAT	NA	False	NA	1	True	AATAAA	-9	NA	157652726	157713657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694233_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.18	chr3	+	2245	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-197	1855	-22	269	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAAATTCTGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	157652853	157711816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.19	chr3	+	5538	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	-19	-2093	-19	1487	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGTGATCCTCAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	157652856	157715158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.2	chr3	+	4390	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-470	-17	-295	17	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTAACATCAGTGTTT	NA	False	NA	32	True	AATAAA	-40	NA	157652580	157713688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.20	chr3	+	3900	10	NIC	ENSMUSG00000039988.15	novel	4836	12	NA	NA	-19	2	intron_retention	FALSE	canonical	2	3	junction_3	108.832638532182	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGCCTATTAATCCTG	NA	False	NA	17	True	AATAAA	-25	NA	157652856	157713673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.21	chr3	+	2013	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-10	245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5941762209872	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAAAACACTCCTGGAC	NA	False	NA	NA	False	NA	NA	NA	157652865	157711792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652900_157653095_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.22	chr3	+	3120	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-185	968	-10	229	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGGAGAATAATGTTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	157652865	157712703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.23	chr3	+	3882	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5941762209872	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATGATGTGCCTATTA	NA	False	NA	11	True	AATAAA	-19	NA	157652866	157713667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652897_157653097_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.24	chr3	+	3991	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-9	-10	intron_retention	FALSE	canonical	0	0	junction_3	99.6236720516658	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTTTTCATGATGTGC	NA	False	NA	5	True	AATAAA	-13	NA	157652866	157713661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.25	chr3	+	3964	11	NIC	ENSMUSG00000039988.15	novel	4836	12	NA	NA	-7	-8	intron_retention	FALSE	canonical	0	0	junction_4	106.167838821368	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157652868	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.26	chr3	+	3929	11	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-7	-9	intron_retention	FALSE	canonical	0	0	junction_1	104.1	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTTCATGATGTGCC	NA	False	NA	6	True	AATAAA	-14	NA	157652868	157713662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.27	chr3	+	2003	12	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-182	4012	-7	23	5prime_fragment	FALSE	canonical	3	283	junction_4	31.5510867384971	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTGCAGGAGAGTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	157652868	157709659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345
ES.22838.28	chr3	+	2552	9	NNC	ENSMUSG00000039988.15	novel	3426	12	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_6	160.801459492755	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGTATTAATGATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	157652868	157712472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157694276_157694422_157697317_157697450_157700288_157700396_157706710_157706810_157709345_157709447_157711376
ES.22838.29	chr3	+	3230	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-182	855	-7	-249	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTAGTTTAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	157652868	157712816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.3	chr3	+	4317	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	-285	-606	-285	0	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652590	157713671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.30	chr3	+	3864	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	127.086584657862	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTCATGATGTGCCTA	NA	False	NA	8	True	AATAAA	-16	NA	157652868	157713664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652927_157653094_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.31	chr3	+	2002	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-5	250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5941762209872	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTCCTGGACCATTA	NA	False	NA	NA	False	NA	NA	NA	157652870	157711797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652896_157653102_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.32	chr3	+	2872	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_9	95.5728343550962	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGTATTAATGATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	157652874	157712472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705301_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.34	chr3	+	4196	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_8	123.975422263624	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTGCCTATTAATC	NA	False	NA	14	True	AATAAA	-22	NA	157652876	157713670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157699302_157699423_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.36	chr3	+	3901	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5941762209872	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGACTTTTCATGATGTG	NA	False	NA	4	True	AATAAA	-12	NA	157652876	157713660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652929_157653093_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.37	chr3	+	6859	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	283	junction_4	28.2102495880164	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTGCCTATTAATC	NA	False	NA	14	True	AATAAA	-22	NA	157652877	157713670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.38	chr3	+	3962	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	3	-14	intron_retention	FALSE	canonical	0	0	junction_10	98.688926087132	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGACTTTTCATGAT	NA	False	NA	1	True	AATAAA	-9	NA	157652878	157713657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157709345_157709447_157711376
ES.22838.4	chr3	+	4415	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-273	-8	intron_retention	FALSE	canonical	0	0	junction_3	122.272321929614	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157652602	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157670186_157670259_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.40	chr3	+	4020	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	10	-6	intron_retention	FALSE	canonical	1	3	junction_1	100.550714970067	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATGATGTGCCTAT	NA	False	NA	9	True	AATAAA	-17	NA	157652885	157713665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.41	chr3	+	3660	9	NNC	ENSMUSG00000039988.15	novel	4836	12	NA	NA	11	-8	intron_retention	FALSE	canonical	1	1	junction_3	147.161847552278	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157652886	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157697317_157697450_157700288_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.42	chr3	+	2269	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	11	250	intron_retention	FALSE	canonical	1	2	junction_8	142.642392264733	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTCCTGGACCATTA	NA	False	NA	NA	False	NA	NA	NA	157652886	157711797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157699302_157699423_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711420
ES.22838.43	chr3	+	2690	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	124.153226573614	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATGTATTAATGATT	NA	False	NA	NA	False	AATAAA	-13	NA	157652887	157712470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652927_157653094_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700240_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.44	chr3	+	3913	12	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_11	100.329539662682	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652895	157713671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157711420
ES.22838.47	chr3	+	2111	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	44	1271	44	247	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAACACTCCTGGACCA	NA	False	NA	NA	False	NA	NA	NA	157652919	157711794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.48	chr3	+	4227	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	46	-9	intron_retention	FALSE	canonical	2	3	junction_7	122.048879528174	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTTCATGATGTGCC	NA	False	NA	6	True	AATAAA	-14	NA	157652921	157713662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157695090_157695295_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.49	chr3	+	3876	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	48	-9	intron_retention	FALSE	canonical	2	6	junction_6	98.6926944301568	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTTCATGATGTGCC	NA	False	NA	6	True	AATAAA	-14	NA	157652923	157713662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.5	chr3	+	3142	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-438	1199	-263	-2	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGTATTAATGATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	157652612	157712472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.50	chr3	+	4076	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	55	-8	intron_retention	FALSE	canonical	0	0	junction_1	123.857572335534	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157652930	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157654381_157654443_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.51	chr3	+	230	1	Intergenic	novelGene_18765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCAGCATCAATGTTGG	NA	False	NA	NA	False	NA	NA	NA	157659126	157659356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_157659100_157659400
ES.22838.52	chr3	+	3359	12	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	13569	2	13517	-2	3prime_fragment	FALSE	canonical	3	283	junction_3	31.5510867384971	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGATGTGCCTATTAAT	NA	False	NA	13	True	AATAAA	-21	NA	157666619	157713669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.53	chr3	+	2505	4	NIC	ENSMUSG00000039988.15	novel	4836	12	NA	NA	528	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	162.294656583498	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157700377	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157700396_157706710_157706810_157709345_157709447_157711376
ES.22838.54	chr3	+	2674	1	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	5955	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157710989	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157711000_157713700
ES.22838.6	chr3	+	4108	14	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-262	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5941762209872	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTTCATGATGTGCCT	NA	False	NA	7	True	AATAAA	-15	NA	157652613	157713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157652931_157653154_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.7	chr3	+	2290	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	-436	2049	-261	75	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTGCCATTCATTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	157652614	157711622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.8	chr3	+	5069	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-259	72	intron_retention	FALSE	canonical	3	283	junction_4	28.2102495880164	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGATGTGCCATTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	157652616	157711619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ES.22838.9	chr3	+	4251	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	-251	-9	intron_retention	FALSE	canonical	1	2	junction_7	158.513143513927	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTTCATGATGTGCC	NA	False	NA	6	True	AATAAA	-14	NA	157652624	157713662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157697317_157697450_157699302_157699423_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711420
ES.22839.1	chr3	-	1424	1	Intergenic	novelGene_18764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATGTAAATTCTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	157652778	157651354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_-_157651400_157652800
ES.2284.1	chr10	-	177	1	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGTCACTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	7265152	7264975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7265000_7265200
ES.22840.1	chr3	-	3060	1	Antisense	novelGene_ENSMUSG00000039988.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGGGTCTATTAATAC	NA	False	NA	NA	False	NA	NA	NA	157707204	157704144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157704100_157707200
ES.22841.1	chr3	-	2486	1	Antisense	novelGene_ENSMUSG00000039988.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGCTCTATGAAAGGAA	NA	False	NA	NA	False	TTTAAA	-30	NA	157714739	157712253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157712300_157714700
ES.22842.1	chr3	+	5129	1	Antisense	novelGene_ENSMUSG00000055436.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGTGGTTTAGGCCAT	NA	False	NA	NA	False	TATAAA	-39	NA	157729772	157734901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_+_157729800_157734900
ES.22843.1	chr3	+	2517	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	-67	0	-29	0	multi-exon	TRUE	canonical	3	70	junction_1	215.046296694973	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742269	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.10	chr3	+	1940	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.115869964389	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCTCTGTATATGCTT	NA	False	NA	NA	False	CATAAA	-17	NA	157742337	157769696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749175_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320
ES.22843.11	chr3	+	4103	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	39	0	1	0	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742337	157774124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.12	chr3	+	1913	14	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	39	4433	1	-2	5prime_fragment	FALSE	canonical	3	641	junction_2	84.4803117709865	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATTATTCTCTGTATA	NA	False	NA	NA	False	CATAAA	-12	NA	157742337	157769691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320
ES.22843.13	chr3	+	4120	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	279.963628237839	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742337	157774124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754253_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.14	chr3	+	2666	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	277.623025663755	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742337	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.15	chr3	+	4605	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	641	junction_2	76.6562294584915	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.16	chr3	+	1901	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	-78	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	223.650641553865	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGGTTCCCCCTGG	NA	False	NA	NA	False	AAAAAG	-13	NA	157742338	157772105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.17	chr3	+	4163	16	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	275.5638744264	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	157742339	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.18	chr3	+	2083	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	41	2018	1	-77	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGGTTCCCCCTGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	157742339	157772106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.19	chr3	+	2720	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	279.963628237839	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742339	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754253_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.2	chr3	+	2686	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742282	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.20	chr3	+	6499	11	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	900	intron_retention	FALSE	canonical	3	146	junction_2	216.538426151111	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCCTAGTAACATGGA	NA	False	NA	NA	False	NA	NA	NA	157742339	157770593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157768364_157769320
ES.22843.21	chr3	+	2500	13	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	237.283629509777	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742339	157772727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.22	chr3	+	4086	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	223.168235249755	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	157742339	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766980_157768285_157768364_157769320_157769507_157771749
ES.22843.23	chr3	+	2463	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	41	1638	1	-240	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAACATTGTTGTTTAC	NA	False	NA	NA	False	AATAAA	-8	NA	157742339	157772486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.24	chr3	+	3045	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-129	intron_retention	FALSE	canonical	3	10	junction_5	226.590316645776	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCAAGAACTTTTCATAT	NA	False	NA	NA	False	TATAAA	-17	NA	157742340	157772054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754253_157757333_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.25	chr3	+	3835	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	4	-1389	2	-9	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	157742340	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.26	chr3	+	3092	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	4	-646	2	646	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGTCATGGTTTGATT	NA	False	NA	NA	False	AATACA	-13	NA	157742340	157773372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.27	chr3	+	1779	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	4	667	2	-124	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTTCATATGATTT	NA	False	NA	NA	False	TATAAA	-22	NA	157742340	157772059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.29	chr3	+	2588	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	230.565063530254	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGGTATAGTGTTTTT	NA	False	NA	26	True	AATAAA	-41	NA	157742340	157772723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157768285_157768364_157769320_157769507_157771749
ES.22843.3	chr3	+	2756	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	-10	1396	-10	2	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATAGTGTTTTTGTTTT	NA	False	NA	31	True	AATAAA	-20	NA	157742288	157772728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.30	chr3	+	2537	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	278.918346092512	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742340	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757387_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.31	chr3	+	7345	13	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	900	intron_retention	FALSE	canonical	3	7	junction_5	235.568151851363	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCCTAGTAACATGGA	NA	False	NA	NA	False	NA	NA	NA	157742340	157770593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157755852_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157764415_157766874_157766986_157768285_157768364_157769320
ES.22843.33	chr3	+	2361	12	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	296.699502934067	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTATTGGTATAGTGTT	NA	False	NA	23	True	AATAAA	-38	NA	157742340	157772720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.34	chr3	+	2351	12	NNC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	318.731810370645	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742340	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.35	chr3	+	2801	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	273.097572350376	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742340	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742687_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.36	chr3	+	2528	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	226.741413594988	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742340	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.37	chr3	+	3937	13	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	1	14	junction_11	289.88027940667	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAATCAGTCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	157742340	157774113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157769320_157769507_157771749
ES.22843.38	chr3	+	2533	14	NNC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	340.828975488506	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742340	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157749197_157749328_157753060_157753148_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.39	chr3	+	4024	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	203.594046362573	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	157742340	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746144_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.4	chr3	+	2608	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	264.494113535017	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742292	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746144_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.40	chr3	+	2325	13	NNC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.787459862348	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATTGGTATAGTGTTT	NA	False	NA	24	True	AATAAA	-39	NA	157742340	157772721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742492_157749291_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.41	chr3	+	2698	15	FSM	ENSMUSG00000063052.10	ENSMUST00000150525.8	2701	15	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_2	284.951275820686	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742341	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.42	chr3	+	2694	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	223.168235249755	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742341	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768291_157768364_157769320_157769507_157771749
ES.22843.43	chr3	+	5577	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	22	junction_5	223.429376740241	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742343	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.44	chr3	+	2812	16	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	282.785871091342	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742344	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157755737_157755852_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.46	chr3	+	5986	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	7	-10	intron_retention	FALSE	canonical	3	641	junction_2	76.6562294584915	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCAGTCTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	157742345	157774114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.47	chr3	+	2662	15	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	218.87723704844	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742346	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747256_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.48	chr3	+	2681	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	221.049721989956	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742348	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758561_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.49	chr3	+	2732	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	282.763557750706	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742349	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746073_157746260_157747222_157747297_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.5	chr3	+	2669	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	14	junction_12	227.931656942792	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGTATAGTGTTTTTG	NA	False	NA	27	True	AATAAA	-42	NA	157742293	157772724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157769320_157769507_157771749
ES.22843.52	chr3	+	2588	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	220.812922943327	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742351	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761397_157764342_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.53	chr3	+	2624	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	203.594046362573	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742351	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746144_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.54	chr3	+	2195	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-7	43	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	213.17886760145	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGACTTTTCGTTGTCCAG	NA	False	NA	NA	False	ACTAAA	-28	NA	157742351	157772226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746073_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.55	chr3	+	2765	14	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	55	3565	-5	866	5prime_fragment	FALSE	canonical	3	641	junction_2	84.4803117709865	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157742353	157770559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320
ES.22843.56	chr3	+	4666	13	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-5	866	intron_retention	FALSE	canonical	3	641	junction_2	79.786303126957	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157742353	157770559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320
ES.22843.57	chr3	+	2019	15	FSM	ENSMUSG00000063052.10	ENSMUST00000150525.8	2701	15	15	667	-5	-124	multi-exon	FALSE	canonical	3	11	junction_2	284.951275820686	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTTCATATGATTT	NA	False	NA	NA	False	TATAAA	-22	NA	157742353	157772059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_157742514_157746077_157746260_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.58	chr3	+	2776	16	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	283.879270113194	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742353	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157753060_157753148_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.59	chr3	+	4013	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742353	157774124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.6	chr3	+	4282	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	214.381645193609	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	157742322	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742687_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.60	chr3	+	4003	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	278.918346092512	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742353	157774124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758410_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.61	chr3	+	6371	12	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	146	junction_2	206.846651387163	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	NA	False	NA	30	True	AATAAA	-45	NA	157742358	157772727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157768364_157769320_157769507_157771749
ES.22843.62	chr3	+	2530	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	229.092317507219	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742368	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.63	chr3	+	2531	14	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	343.032749829548	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157742403	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157749197_157749328_157754037_157754197_157755737_157755852_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.64	chr3	+	2795	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.863651544589	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742507	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742683_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754253_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.65	chr3	+	2547	13	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	3579	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	286.071511553007	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTATAGTGTTTTTGT	NA	False	NA	28	True	AATAAA	-43	NA	157746075	157772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157746260_157749197_157749328_157754037_157754253_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.66	chr3	+	3398	8	NIC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	-9391	1	intron_retention	FALSE	canonical	3	748	junction_5	54.0256930562124	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATAGTGTTTTTGTTT	6695	False	NA	30	True	AATAAA	-45	NA	157758523	157772727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.67	chr3	+	3264	4	ISM	ENSMUSG00000063052.10	ENSMUST00000150525.8	2701	15	22619	5	-2957	-5	3prime_fragment	FALSE	canonical	3	748	junction_1	26.9608770051883	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATTGGTATAGTGTTT	NA	False	NA	24	True	AATAAA	-39	NA	157764957	157772721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.68	chr3	+	4095	1	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	-1450	866	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	623	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157766464	157770559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157766500_157770600
ES.22843.69	chr3	+	4592	1	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	1208	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGTCTGTAG	1422	False	NA	NA	False	AATAAA	-15	NA	157769523	157774115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157769500_157774100
ES.22843.7	chr3	+	2396	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	-236	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGTTGTTTACACTG	NA	False	NA	NA	False	AATAAA	-12	NA	157742336	157772490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.70	chr3	+	7717	1	Genic_Genomic	ENSMUSG00000063052.10	novel	NA	NA	NA	NA	4515	6423	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGGAAGGAAGGAAGG	4729	False	NA	NA	False	NA	NA	NA	157772830	157780547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr3_+_157772800_157780500
ES.22843.8	chr3	+	2524	14	NIC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	223.650641553865	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742336	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_157742514_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22843.9	chr3	+	2485	13	NNC	ENSMUSG00000063052.10	novel	2450	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	296.672694227157	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742336	157772726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_157742514_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ES.22844.10	chr3	-	4319	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	5	-20	intron_retention	FALSE	canonical	3	21	junction_10	189.13757118387	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATTTTTCAAGTTTG	NA	False	NA	-20	True	ATTAAA	-18	NA	157742228	157716129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.101	chr3	-	2691	15	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-8	-182	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	273.124962055758	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTATCTTATGCACAGT	NA	False	NA	-6	True	AATAAA	-20	NA	157742260	157716737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157732361_157732496_157737088_157737286_157742152
ES.22844.102	chr3	-	2697	14	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	10	-182	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	278.056313737824	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTATCTTATGCACAGT	NA	False	NA	-6	True	AATAAA	-20	NA	157737381	157716737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157729759_157729869_157732361_157732496_157737088
ES.22844.103	chr3	-	5900	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	15	-184	intron_retention	FALSE	canonical	3	70	junction_10	177.595905233076	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAGTATCTTATGCACA	NA	False	NA	-8	True	AATAAA	-18	NA	157742218	157716739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157732496_157737088_157737286_157742152
ES.22844.104	chr3	-	7523	12	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-184	intron_retention	FALSE	canonical	3	27	junction_6	195.151604554845	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAGTATCTTATGCACA	NA	False	NA	-8	True	AATAAA	-18	NA	157742242	157716739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157742152
ES.22844.105	chr3	-	3680	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-13	-186	intron_retention	FALSE	canonical	3	21	junction_10	189.13757118387	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTAGTATCTTATGCA	NA	False	NA	-10	True	AATAAA	-16	NA	157742201	157716741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.109	chr3	-	6165	11	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	85	-187	intron_retention	FALSE	canonical	3	86	junction_3	171.057417260989	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTAGTATCTTATGC	NA	False	NA	-11	True	AATAAA	-15	NA	157737306	157716742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.111	chr3	-	6190	12	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	12	-189	intron_retention	FALSE	canonical	3	316	junction_11	100.128512464055	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGCAGTAGTATCTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	157742221	157716744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157742152
ES.22844.113	chr3	-	2166	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	6	482	0	102	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTGTAAAATATGATGT	NA	False	NA	NA	False	AGTAAA	-17	NA	157737397	157717037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ES.22844.114	chr3	-	2957	1	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1798	630	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157721953	157718996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157719000_157722000
ES.22844.115	chr3	-	4819	7	NIC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	622	junction_2	26.6270539113887	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGTGCAAAGCAGA	NA	False	NA	-2	True	NA	NA	NA	157737404	157721958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.116	chr3	-	6475	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	-227	-3778	-227	3778	mono-exon	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGTGGGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	157742273	157735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157735800_157742300
ES.22844.117	chr3	-	1603	2	FSM	ENSMUSG00000055436.19	ENSMUST00000197292.2	930	2	-17	-656	8	23	multi-exon	FALSE	canonical	3	316	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGTGGGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	157742268	157735798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157737286_157742152
ES.22844.118	chr3	-	697	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	-214	1987	-214	-1987	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGAAAATTTAAATGCG	NA	False	NA	NA	False	NA	NA	NA	157742260	157741563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157741600_157742300
ES.22844.12	chr3	-	6776	12	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	13	-24	intron_retention	FALSE	canonical	3	86	junction_3	180.674402363538	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGCATTTTTCAAG	NA	False	NA	-24	True	ATTAAA	-14	NA	157742175	157716133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157742152
ES.22844.14	chr3	-	4882	11	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	-1808	-25	intron_retention	FALSE	canonical	3	70	junction_10	226.143671147348	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAAGCATTTTTCAA	NA	False	NA	-25	True	ATTAAA	-13	NA	157731114	157716134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879
ES.22844.15	chr3	-	4330	11	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-1280	-25	intron_retention	TRUE	canonical	3	70	junction_10	230.379165724681	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAAGCATTTTTCAA	NA	False	NA	-25	True	ATTAAA	-13	NA	157730586	157716134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879
ES.22844.17	chr3	-	2941	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	-2	167	-2	4	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATGTCGTTGGTCACAT	NA	False	NA	0	True	NA	NA	NA	157742278	157716276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.18	chr3	-	2922	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-54	-1225	1	0	multi-exon	FALSE	canonical	3	86	junction_3	173.80710492446	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGCATGTCGTTGGTC	NA	False	NA	-4	True	NA	NA	NA	157742242	157716280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.2	chr3	-	4401	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	30	-2	intron_retention	TRUE	canonical	2	10	junction_11	236.961831783564	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTGAGTAACTTTTTA	NA	False	NA	-2	True	ATTAAA	-36	NA	157737361	157716111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157730334_157730399_157732361_157732496_157737088
ES.22844.21	chr3	-	4422	11	NIC	ENSMUSG00000055436.19	novel	2952	10	NA	NA	-1515	0	intron_retention	FALSE	canonical	3	70	junction_10	173.18937611759	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGCATGTCGTTGGTC	NA	False	NA	-4	True	NA	NA	NA	157730821	157716280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879
ES.22844.22	chr3	-	6630	11	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	9	-49	intron_retention	FALSE	canonical	3	73	junction_1	175.218263888215	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTAGCAAATTTATATTT	NA	False	NA	-53	True	AATAAA	-15	NA	157737382	157716329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.24	chr3	-	6160	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-5	13	intron_retention	FALSE	canonical	3	70	junction_10	177.595905233076	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGTTGTGTTTATT	NA	False	NA	-14	True	AATAAA	-30	NA	157742281	157716542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157732496_157737088_157737286_157742152
ES.22844.3	chr3	-	2964	11	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	242.311287397017	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGAGTAACTTTT	NA	False	NA	-4	True	ATTAAA	-34	NA	157737382	157716113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ES.22844.30	chr3	-	4010	13	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	29	4	intron_retention	FALSE	canonical	3	21	junction_11	267.46038128208	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTAGAGCTGGGTT	NA	False	NA	-23	True	AATAAA	-21	NA	157737362	157716551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088
ES.22844.31	chr3	-	2678	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	19	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	232.067450917073	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTAGAGCTGGGTT	NA	False	NA	-23	True	AATAAA	-21	NA	157742214	157716551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157737627_157737704_157742152
ES.22844.32	chr3	-	6407	12	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	0	3	intron_retention	FALSE	canonical	1	5	junction_11	186.265827992377	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157742243	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737289_157742152
ES.22844.33	chr3	-	2350	12	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-3133	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	243.345654241074	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157732439	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728543_157729759_157729869_157732361
ES.22844.34	chr3	-	2612	12	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	238.188167854294	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157737380	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723510_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ES.22844.37	chr3	-	3958	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-14	3	intron_retention	FALSE	canonical	3	21	junction_10	189.13757118387	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157742290	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.38	chr3	-	7481	12	FSM	ENSMUSG00000055436.19_ENSMUSG00000105201.2	ENSMUST00000072875.15	2654	12	-4824	-3	6	3	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	762	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157742227	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ES.22844.39	chr3	-	6533	13	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-8	3	intron_retention	FALSE	canonical	3	27	junction_7	234.854017896697	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTGTAGAGCTGGGT	NA	False	NA	-24	True	AATAAA	-20	NA	157742260	157716552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157742152
ES.22844.4	chr3	-	3090	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	3	13	3	-13	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGTTTGTATTTGA	NA	False	NA	-13	True	ATTAAA	-25	NA	157742273	157716122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.42	chr3	-	6453	12	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	3	1	intron_retention	FALSE	canonical	3	86	junction_3	180.674402363538	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCTGTAGAGCTGG	NA	False	NA	-26	True	AATAAA	-18	NA	157742273	157716554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157742152
ES.22844.44	chr3	-	2825	15	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	19	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	254.039417237176	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCTGTAGAGCTGG	NA	False	NA	-26	True	AATAAA	-18	NA	157742214	157716554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157729759_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.48	chr3	-	7836	10	NIC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	573	junction_1	39.7746739943651	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737391	157716555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.5	chr3	-	6994	12	NNC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	-1	-14	intron_retention	FALSE	canonical	3	27	junction_7	266.73405828885	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCAAGTTTGTATTTG	NA	False	NA	-14	True	ATTAAA	-24	NA	157737404	157716123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.50	chr3	-	5645	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	13	junction_11	225.422469911117	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157742245	157716555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157729869_157730334_157732496_157737088_157737286_157742152
ES.22844.52	chr3	-	6234	13	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_7	260.564278164824	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737389	157716555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157732496_157737088
ES.22844.53	chr3	-	7754	11	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	27	junction_6	273.452902709041	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737404	157716555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.59	chr3	-	7115	10	NIC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	89	0	intron_retention	FALSE	canonical	3	573	junction_1	40.2878531459683	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737302	157716555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157732496_157737088
ES.22844.60	chr3	-	2786	13	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	256.119153585462	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157737399	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157732361_157732496_157737088
ES.22844.62	chr3	-	2642	13	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.932395688579	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742230	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717871_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.63	chr3	-	3993	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_13	268.303083058503	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742254	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088_157737286_157737627_157737704_157742152
ES.22844.65	chr3	-	6939	9	NIC	ENSMUSG00000055436.19	novel	2952	10	NA	NA	-1737	-2	intron_retention	FALSE	canonical	3	573	junction_1	39.0608499651505	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157731043	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477
ES.22844.66	chr3	-	5932	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	13	junction_10	191.046878336764	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742242	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157730334_157732496_157737088_157737286_157742152
ES.22844.67	chr3	-	6060	13	NNC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	9	-2	intron_retention	FALSE	canonical	3	27	junction_7	294.875432739544	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157737199	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157732496_157737088
ES.22844.68	chr3	-	4772	11	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	-2121	-2	intron_retention	FALSE	canonical	3	70	junction_10	226.143671147348	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157731427	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879
ES.22844.69	chr3	-	4008	4	ISM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	20131	-948	1694	-2	intron_retention	FALSE	canonical	3	86	junction_3	234.931195601322	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157722057	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588
ES.22844.7	chr3	-	2916	14	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.299778698726	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTTCAAGTTTGTATT	NA	False	NA	-16	True	ATTAAA	-22	NA	157742242	157716125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157716392_157716531_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.70	chr3	-	2749	14	NNC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	252.68440451287	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742234	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.71	chr3	-	3934	12	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	8	-2	intron_retention	FALSE	canonical	3	21	junction_10	230.261116600658	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157737383	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157732361_157732496_157737088
ES.22844.73	chr3	-	2654	14	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	259.793568482463	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742175	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157737627_157737704_157742152
ES.22844.78	chr3	-	2822	15	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	281.399273311798	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742247	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157732361_157732496_157737088_157737286_157737627_157737704_157742152
ES.22844.79	chr3	-	2460	12	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	235.236438117443	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742278	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157742152
ES.22844.8	chr3	-	3107	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-85	-1379	3	-17	multi-exon	FALSE	canonical	3	86	junction_3	173.80710492446	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTTCAAGTTTGTAT	NA	False	NA	-17	True	ATTAAA	-21	NA	157742273	157716126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.80	chr3	-	2733	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	233.411691548387	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742242	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157729759_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.82	chr3	-	2575	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	265.209181066988	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742273	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157732361_157732496_157742152
ES.22844.83	chr3	-	4679	15	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	22	-2	intron_retention	FALSE	canonical	0	0	junction_11	257.234319051637	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742211	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157729768_157731738_157732361_157732496_157737088_157737286_157742152
ES.22844.85	chr3	-	6474	13	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_12	240.281244355212	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATGCTTCTGTAGAGC	NA	False	NA	-29	True	AATAAA	-15	NA	157742242	157716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088_157737286_157737627_157737704_157742152
ES.22844.87	chr3	-	3606	13	NIC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	22	-3	intron_retention	FALSE	canonical	3	21	junction_11	224.658676292133	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCATGCTTCTGTAGAG	NA	False	NA	-30	True	AATAAA	-14	NA	157737369	157716558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157729869_157732361_157732496_157737088
ES.22844.88	chr3	-	5873	11	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	-31	-4	intron_retention	FALSE	canonical	0	0	junction_1	196.812321768735	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCATGCTTCTGTAGA	NA	False	NA	-31	True	AATAAA	-13	NA	157737123	157716559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717570_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157732496_157737088
ES.22844.89	chr3	-	4041	13	NNC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	-2073	-4	intron_retention	FALSE	canonical	0	0	junction_12	286.047817972217	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCATGCTTCTGTAGA	NA	False	NA	-31	True	AATAAA	-13	NA	157731379	157716559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157729768
ES.22844.9	chr3	-	3876	11	NNC	ENSMUSG00000055436.19	novel	2952	10	NA	NA	-413	-20	intron_retention	FALSE	non_canonical	0	0	junction_5	282.146132349887	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATTTTTCAAGTTTG	NA	False	NA	-20	True	ATTAAA	-18	NA	157729719	157716129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723445_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477
ES.22844.91	chr3	-	2899	15	NIC	ENSMUSG00000055436.19	novel	1643	13	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	270.439372284497	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCATGCTTCTGTAG	NA	False	NA	-32	True	AATAAA	-12	NA	157742273	157716560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157729759_157729869_157732361_157732496_157737088_157737286_157742152
ES.22844.95	chr3	-	2774	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	-293	625	-293	-179	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTTATGCACAGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	157742569	157716734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ES.22844.97	chr3	-	3775	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	7	-180	intron_retention	FALSE	canonical	2	10	junction_11	235.064437848068	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCTTATGCACAGTGA	NA	False	NA	-4	True	AATAAA	-22	NA	157742226	157716735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157729869_157730334_157730399_157732361_157732496_157737088_157737286_157742152
ES.22844.98	chr3	-	2373	12	ISM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	4905	-768	-75	-182	3prime_fragment	FALSE	canonical	3	86	junction_3	163.435887295901	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTATCTTATGCACAGT	NA	False	NA	-6	True	AATAAA	-20	NA	157737283	157716737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ES.22845.1	chr3	-	3349	5	Antisense	novelGene_ENSMUSG00000063052.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTTTCCTATTGTCCC	NA	False	NA	NA	False	NA	NA	NA	157758047	157743952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157746260_157747222_157747295_157749195_157749328_157754037_157754162_157757333
ES.22845.2	chr3	-	2514	2	Antisense	novelGene_ENSMUSG00000063052.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCCAACTAAGAACACAAA	NA	False	NA	NA	False	NA	NA	NA	157751062	157746647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157747295_157749195
ES.22845.3	chr3	-	3730	8	Antisense	novelGene_ENSMUSG00000063052.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157763745	157746670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr3_-_157747295_157749195_157749328_157754037_157754162_157757333_157757480_157758402_157758570_157760213_157760304_157760414_157760472_157761355
ES.22846.1	chr3	+	158	1	Intergenic	novelGene_18766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	158777956	158778114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_158778000_158778100
ES.22847.1	chr3	+	3364	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	-37	-4	-37	4	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTTTCAATCAAGG	NA	False	NA	NA	False	AATAAA	-24	NA	159201032	159235596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.10	chr3	+	2485	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-20	-494	5	-2	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	159201074	159235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.11	chr3	+	4874	11	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	5	1	intron_retention	FALSE	canonical	3	37	junction_10	12.6079340099796	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATTTTTTTCAATCA	NA	False	NA	NA	False	AATAAA	-21	NA	159201074	159235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.12	chr3	+	2520	11	NNC	ENSMUSG00000028175.16	novel	1971	11	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	23.5968218198977	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	159201074	159235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221299_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.13	chr3	+	5015	12	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_8	25.7486258960976	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201074	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159228994_159229413_159229587_159231597_159231740_159232167_159232345_159233580_159233767_159234635
ES.22847.14	chr3	+	4829	11	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-5	1656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.7816436478058	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACATCCCTGTGAATT	NA	False	NA	NA	False	AATATA	-11	NA	159201082	159237248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222592_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.15	chr3	+	3133	11	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	22.2027025382047	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201082	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159233580_159233767_159234635
ES.22847.16	chr3	+	771	4	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	-11	13727	-4	-13727	5prime_fragment	FALSE	canonical	3	57	junction_3	8.5764535535124	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTTAAATATGCATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	159201083	159221369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141
ES.22847.17	chr3	+	5282	10	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	37	junction_9	10.760008261046	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201085	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.18	chr3	+	4382	12	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-2	1818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.0533601890904	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCCTGTCTTAGGATTA	NA	False	NA	NA	False	NA	NA	NA	159201085	159237410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221416_159221505_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.2	chr3	+	3364	12	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	20.541833952906	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201063	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221299_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.20	chr3	+	3327	12	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	20.3693173893749	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	159201096	159235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228129_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.21	chr3	+	4951	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	34	-1662	9	1662	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCTGTGAATTAATTAG	NA	False	NA	NA	False	AATATA	-17	NA	159201103	159237254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.22	chr3	+	3129	11	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	21.7660285766605	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201105	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159229009_159232167_159232345_159233580_159233767_159234635
ES.22847.23	chr3	+	4336	7	NNC	ENSMUSG00000028175.16	novel	1971	11	NA	NA	25686	13494	intron_retention	FALSE	canonical	0	0	junction_1	23.0867927612304	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGATGTCTTCTTGGAT	NA	False	NA	NA	False	NA	NA	NA	159226780	159249086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159229587_159231597_159231740_159232167_159232345_159233580_159233767_159234635_159234946_159237589_159237760_159248541
ES.22847.24	chr3	+	2785	4	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	26642	-111	26642	-6	3prime_fragment	FALSE	canonical	3	37	junction_3	11.8977121983832	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTTAATTGGACTTT	NA	False	NA	NA	False	TATAAA	-15	NA	159227736	159235207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr3_+_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.3	chr3	+	3716	11	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	37	junction_10	13.6806432597302	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201063	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.4	chr3	+	2786	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	-3	540	-3	-44	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTCTGTGTCTATATGTA	NA	False	NA	NA	False	GATAAA	-26	NA	159201066	159235052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.5	chr3	+	4315	11	NNC	ENSMUSG00000028175.16	novel	1971	11	NA	NA	-1	1818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	21.3925220579529	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGCCTGTCTTAGGATTA	NA	False	NA	NA	False	NA	NA	NA	159201068	159237410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226612_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.6	chr3	+	3741	11	NIC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	37	junction_10	12.4342269562687	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTATTTTTTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	159201068	159235589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.7	chr3	+	5681	9	NIC	ENSMUSG00000028175.16	novel	1971	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	37	junction_8	11.1628569371823	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATTTATTTTTTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	159201070	159235589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221782_159222539_159222588_159226466_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.8	chr3	+	3237	12	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.0013773652984	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	159201071	159235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229495_159229587_159232167_159232345_159233580_159233767_159234635
ES.22847.9	chr3	+	3444	13	NNC	ENSMUSG00000028175.16	novel	3323	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.5462997890381	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201071	159235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221299_159221416_159221505_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ES.22848.1	chr3	+	2685	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	24	850	24	270	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTTCCTGTCCCAACA	NA	False	NA	115	True	AATAAA	-16	NA	159545332	159640809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ES.22848.10	chr3	+	1524	1	NIC	ENSMUSG00000028173.11	novel	2050	13	NA	NA	88689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159642776	159644300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159642800_159644300
ES.22848.2	chr3	+	1957	12	NIC	ENSMUSG00000028173.11	novel	2050	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	10.3316891964912	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159545347	159644300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159644090
ES.22848.3	chr3	+	3485	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	80	-6	13	6	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGAGGTGTCTCTATT	NA	False	NA	NA	False	AATAAA	-35	NA	159545388	159641665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ES.22848.4	chr3	+	3122	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	114	323	47	-323	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTCTCATTGTTTAGG	NA	False	NA	NA	False	NA	NA	NA	159545422	159641336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ES.22848.5	chr3	+	1779	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	271	0	98	0	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159545644	159644300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ES.22848.6	chr3	+	4598	1	Intergenic	novelGene_18767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGCTCATGCAAATTATA	NA	False	NA	NA	False	NA	NA	NA	159548231	159552829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_159548200_159552800
ES.22848.7	chr3	+	175	1	Intergenic	novelGene_18768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTTCC	NA	False	NA	NA	False	NA	NA	NA	159579997	159580172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr3_+_159580000_159580200
ES.22848.8	chr3	+	2877	7	NIC	ENSMUSG00000028173.11	novel	2050	13	NA	NA	61304	0	intron_retention	FALSE	canonical	3	12	junction_6	9.77525219907679	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159615391	159644300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159615459_159616934_159617033_159617396_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ES.22848.9	chr3	+	1909	1	NIC	ENSMUSG00000028173.11	novel	3559	12	NA	NA	63069	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	159617156	159619065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr3_+_159617200_159619100
ES.22849.1	chr4	-	204	1	Intergenic	novelGene_18769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTATGACTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	3227766	3227562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_3227600_3227800
ES.2285.1	chr10	+	176	1	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	7384332	7384508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7384300_7384500
ES.22850.1	chr4	+	3926	1	Intergenic	novelGene_18770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAATAGAAAGAAA	1745	False	NA	NA	False	NA	NA	NA	3232924	3236850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_3232900_3236800
ES.22851.1	chr4	-	176	1	Intergenic	novelGene_18771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3370227	3370051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_3370100_3370200
ES.22852.1	chr4	+	2518	4	NNC	ENSMUSG00000083489.2	novel	474	3	NA	NA	-1922	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTCTTGAAACCATCT	NA	False	NA	NA	False	AATAAA	-16	NA	3384923	3389097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3386518_3386801_3386992_3387620_3387803_3388545
ES.22853.1	chr4	+	174	1	Intergenic	novelGene_18772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGGACTCCACT	NA	False	NA	NA	False	NA	NA	NA	3429205	3429379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_3429200_3429400
ES.22854.1	chr4	+	4606	2	Antisense	novelGene_ENSMUSG00000028232.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAAAAAC	NA	False	NA	NA	False	AATATA	-39	NA	3563606	3573318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_3564256_3569361
ES.22854.2	chr4	+	9738	1	Antisense	novelGene_ENSMUSG00000028232.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3563610	3573348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_3563600_3573300
ES.22855.1	chr4	+	5492	14	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	-286	201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.3448443664867	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTACACGTGTAATC	NA	False	NA	NA	False	TATAAA	-15	NA	3574588	3615484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3577063_3577571_3577653_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.10	chr4	+	2449	11	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	8	2064	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	58.4521171558396	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTGTCTTAAATCT	-10	True	NA	NA	False	AATAAA	-16	NA	3574882	3604615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604428
ES.22855.12	chr4	+	6820	12	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	11	6453	11	-5117	5prime_fragment	FALSE	canonical	2	97	junction_11	32.4144136901477	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAGAATGCTACGACC	-7	True	NA	NA	False	NA	NA	NA	3574885	3610166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822
ES.22855.13	chr4	+	4233	14	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	55.5801037152152	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTTATTTTTTG	-6	True	NA	13	True	NA	NA	NA	3574886	3616621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858_3616053_3616136
ES.22855.14	chr4	+	7726	11	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	12	6453	12	-5117	intron_retention	FALSE	canonical	3	152	junction_6	22.5088871337523	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAGAATGCTACGACC	-6	True	NA	NA	False	NA	NA	NA	3574886	3610166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698
ES.22855.15	chr4	+	4609	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	13	-295	13	295	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTTAAGGTTAATGGAC	-5	True	NA	NA	False	AATAAA	-10	NA	3574887	3616914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.16	chr4	+	4387	14	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	13	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	67.7088266557662	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATCTCAAATTTTGTT	-5	True	NA	3	True	NA	NA	NA	3574887	3616611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3577571_3577653_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.17	chr4	+	5224	12	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	15	5	intron_retention	FALSE	canonical	3	128	junction_11	26.4034182610466	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTATTTTTTGCTT	-3	True	NA	16	True	NA	NA	NA	3574889	3616624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3605902_3614858
ES.22855.18	chr4	+	7184	12	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	15	-9	intron_retention	FALSE	canonical	2	97	junction_10	34.1123568895786	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTATCTCAAATTTTGT	-3	True	NA	2	True	NA	NA	NA	3574889	3616610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.19	chr4	+	3849	7	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	15	20793	15	-2780	intron_retention	FALSE	canonical	3	152	junction_6	20.3695033485519	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAATAA	-3	True	NA	NA	False	NA	NA	NA	3574889	3595826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459
ES.22855.2	chr4	+	4607	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	-275	-5	-275	5	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTATTTTTTGCTT	NA	False	NA	16	True	NA	NA	NA	3574599	3616624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.20	chr4	+	4076	12	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	56.0488275914864	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCAAATTTTGTTTTAT	-3	True	NA	7	True	NA	NA	NA	3574889	3616615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3605837_3605902_3614858
ES.22855.21	chr4	+	4393	14	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	23	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	66.3179538731192	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTATCTCAAATTTTGT	5	True	NA	2	True	NA	NA	NA	3574897	3616610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3594934_3595033_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.23	chr4	+	4240	12	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	27	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	59.1369051753557	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTATTTTTTGCTT	9	True	NA	16	True	NA	NA	NA	3574901	3616624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3575130_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.24	chr4	+	3570	15	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	27	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.369750546121	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAAAAAGTCTAGGCATA	9	True	NA	NA	False	NA	NA	NA	3574901	3615337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3578813_3578915_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591668_3593459_3593638_3594934_3595033_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.25	chr4	+	4466	15	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	28	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.8698553417759	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTATCTCAAATTTTGT	10	True	NA	2	True	NA	NA	NA	3574902	3616610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3577571_3577653_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3590762_3590858_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.26	chr4	+	4478	15	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.0188071657463	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAATTTTGTTTTATT	10	True	NA	8	True	NA	NA	NA	3574902	3616616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3577571_3577653_3578813_3578915_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.27	chr4	+	2939	12	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	29	209	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	56.0488275914864	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTGTAATCCCTATTGA	11	True	NA	NA	False	TATAAA	-23	NA	3574903	3615492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3605837_3605902_3614858
ES.22855.28	chr4	+	5419	13	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	33	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.9764469770667	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCCTGGTCATAGTGT	15	True	NA	NA	False	NA	NA	NA	3574907	3617727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605805_3605902_3614858
ES.22855.3	chr4	+	3221	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	-19	1125	-19	211	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTAATCCCTATTGAAA	-8	True	NA	NA	False	TATAAA	-25	NA	3574855	3615494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.30	chr4	+	4297	13	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.9764469770667	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCAAATTTTGTTTTAT	-8	True	NA	7	True	NA	NA	NA	3574917	3616615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605805_3605902_3614858
ES.22855.31	chr4	+	3191	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	52	28403	-23	4285	5prime_fragment	FALSE	canonical	3	157	junction_3	13.1402688962847	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGGTGTGTGATAGT	1	True	NA	NA	False	NA	NA	NA	3574926	3588216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451
ES.22855.32	chr4	+	4840	12	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	3	208	intron_retention	FALSE	canonical	2	97	junction_10	32.4144136901477	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGTGTAATCCCTATTG	6	True	NA	NA	False	TATAAA	-22	NA	3574952	3615491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.33	chr4	+	5249	8	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	-4699	-9	intron_retention	FALSE	canonical	2	97	junction_6	38.1778865366872	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTATCTCAAATTTTGT	NA	False	NA	2	True	NA	NA	NA	3588886	3616610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.34	chr4	+	2205	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	27270	-2	-3492	2	3prime_fragment	FALSE	canonical	2	97	junction_2	22.5141930543577	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTTATTTTTTG	NA	False	NA	13	True	NA	NA	NA	3602144	3616621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.35	chr4	+	5118	3	Genic_Genomic	ENSMUSG00000028233.7	novel	4327	13	NA	NA	5755	-5	multi-exon	TRUE	canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTCAAATTTTGTTTTA	NA	False	NA	6	True	NA	NA	NA	3611391	3616614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_3613571_3613605_3614516_3614585
ES.22855.5	chr4	+	3999	4	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	-7	27654	-7	5034	5prime_fragment	FALSE	canonical	3	157	junction_3	13.1402688962847	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTATTGAGTGTTCAAAT	4	True	NA	NA	False	TTTAAA	-4	NA	3574867	3588965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451
ES.22855.6	chr4	+	4538	14	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5043945379121	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	7	True	NA	11	True	NA	NA	NA	3574870	3616619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3578707_3578915_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ES.22855.8	chr4	+	4926	14	NNC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	2	211	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	69.4411333858914	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTAATCCCTATTGAAA	-16	True	NA	NA	False	TATAAA	-25	NA	3574876	3615494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3612785_3614073_3614419
ES.22855.9	chr4	+	1900	1	NIC	ENSMUSG00000028233.7	novel	4327	13	NA	NA	5	-7152	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAGAAAAAAAGAAA	-13	True	NA	NA	False	NA	NA	NA	3574879	3576779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3574900_3576800
ES.22856.1	chr4	-	2688	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	12	-10	12	10	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTGGAGAATTAGTT	292	False	NA	NA	False	AATAAA	-24	NA	3574841	3549030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ES.22856.10	chr4	-	2580	9	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	-2	-236	intron_retention	FALSE	canonical	0	0	junction_5	30.2197679507967	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	278	False	NA	NA	False	AATAAA	-17	NA	3574855	3549276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3562019_3562144_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ES.22856.11	chr4	-	2720	10	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	2	-237	intron_retention	FALSE	canonical	0	0	junction_5	34.7513211401762	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTCTAGTAAAAATGTTA	-4	True	NA	NA	False	AATAAA	-16	NA	3574802	3549277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3562019_3562144_3564092_3564258_3567280_3567475_3569363_3569753_3570320_3570373_3574703
ES.22856.12	chr4	-	2171	8	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.3894765286481	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCTCTAGTAAAAATGT	-11	True	NA	NA	False	AATAAA	-14	NA	3574809	3549279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3551892_3560498_3560693_3564092_3564258_3569363_3569464_3569630_3569753_3570328_3570373_3574703
ES.22856.13	chr4	-	3488	5	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	6	-7619	intron_retention	FALSE	canonical	0	0	junction_3	28.3460755661167	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTTGTCATGGAATCT	0	True	NA	NA	False	AATAAA	-17	NA	3574847	3557946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ES.22856.14	chr4	-	1470	5	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	2	9418	intron_retention	FALSE	canonical	0	0	junction_3	28.3460755661167	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTACTGTAGATAATTG	-9	True	NA	NA	False	AATAAA	-17	NA	3574807	3559924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ES.22856.2	chr4	-	2469	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	-1	222	-1	-222	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	279	False	NA	NA	False	AATAAA	-31	NA	3574854	3549262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ES.22856.3	chr4	-	2600	8	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	2	-222	intron_retention	FALSE	canonical	0	0	junction_1	23.8789464096022	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	-4	True	NA	NA	False	AATAAA	-31	NA	3574802	3549262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550763_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ES.22856.4	chr4	-	8677	4	NIC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	9554	-222	intron_retention	FALSE	canonical	3	50	junction_3	13.735598518691	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	9874	False	NA	NA	False	AATAAA	-31	NA	3564973	3549262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3550580_3551751_3551892_3554353_3560693_3564092
ES.22856.5	chr4	-	5565	3	NNC	ENSMUSG00000028232.14	novel	658	2	NA	NA	-3888	-227	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	41	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTATTCTTGAGAT	NA	False	NA	NA	False	AATAAA	-26	NA	3556045	3549267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3553937_3553977
ES.22856.6	chr4	-	2613	9	NNC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-227	intron_retention	FALSE	canonical	1	1	junction_6	29.7394939432399	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTATTCTTGAGAT	-11	True	NA	NA	False	AATAAA	-26	NA	3574809	3549267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3567280_3567475_3569363_3569753_3570320_3570373_3574703
ES.22856.7	chr4	-	2249	9	NIC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-230	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	22.1722658968361	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAATGTTATTCTTGA	-11	True	NA	NA	False	AATAAA	-23	NA	3574809	3549270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569464_3569630_3569753_3570320_3570373_3574703
ES.22856.8	chr4	-	1912	5	NIC	ENSMUSG00000028232.14	novel	2773	9	NA	NA	0	-232	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.8855270850248	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTAAAAATGTTATTCTT	-11	True	NA	NA	False	AATAAA	-21	NA	3574809	3549272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3550580_3551751_3551892_3560498_3560693_3564092_3564258_3574703
ES.22856.9	chr4	-	2551	9	NNC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	16	-236	intron_retention	FALSE	non_canonical	0	0	junction_4	33.9926462635671	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	-6	True	NA	NA	False	AATAAA	-17	NA	3574837	3549276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3550580_3551751_3551892_3554353_3554415_3555805_3555927_3560498_3560693_3564092_3564258_3569363_3569753_3570328_3570373_3574703
ES.22857.1	chr4	+	3216	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-31	278	-31	-277	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGGGATTGAATATCTCA	-6	True	NA	NA	False	ATTAAA	-42	NA	3678083	3791335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.10	chr4	+	3386	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCATCTTGTCTTACTT	23	False	NA	NA	False	ACTAAA	-17	NA	3678144	3791612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.11	chr4	+	2525	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	25	-851	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAAATGACTTGAACAT	33	False	NA	NA	False	AATACA	-17	NA	3678154	3790761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.12	chr4	+	3250	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	28	109	25	-109	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTCCCTACTCTCAT	33	False	NA	NA	False	NA	NA	NA	3678154	3791503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.13	chr4	+	1476	9	NNC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	25	12352	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	15.6199991997439	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	33	False	NA	NA	False	NA	NA	NA	3678154	3751528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3751057
ES.22857.14	chr4	+	3099	13	NNC	ENSMUSG00000042228.15	novel	3387	13	NA	NA	26	-295	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	15.7080570267476	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTAGATGACTAGGCG	34	False	NA	NA	False	ATTAAA	-24	NA	3678155	3791317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3678365_3738724_3738799_3742441_3742488_3743160_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.15	chr4	+	2508	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	31	848	28	-848	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGACTTGAACATTTT	36	False	NA	NA	False	AATACA	-20	NA	3678157	3790764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.16	chr4	+	3818	1	Intergenic	novelGene_18773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAACCATCT	1306	False	NA	NA	False	NA	NA	NA	3752005	3755823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_3752000_3755800
ES.22857.2	chr4	+	3009	13	NNC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	-30	-519	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	13.3674043852949	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGATTCTCAACTCTTGT	-5	True	NA	36	True	AATACA	-33	NA	3678084	3791093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3678365_3738724_3738862_3742441_3742488_3743160_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.3	chr4	+	2883	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	-33	537	-21	-537	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTTGTCTTGTGTAT	4	True	NA	18	True	AATACA	-15	NA	3678093	3791075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.4	chr4	+	3481	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-21	3	-21	-2	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCATCTTGTCTTAC	4	True	NA	NA	False	ACTAAA	-15	NA	3678093	3791610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.5	chr4	+	2948	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-21	536	-21	-535	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCTTGTGTATCA	4	True	NA	20	True	AATACA	-17	NA	3678093	3791077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.6	chr4	+	4897	12	NIC	ENSMUSG00000042228.15	novel	3387	13	NA	NA	-20	-537	intron_retention	FALSE	canonical	3	9	junction_2	11.4912830779186	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTTGTCTTGTGTAT	5	True	NA	18	True	AATACA	-15	NA	3678094	3791075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.7	chr4	+	3387	14	NNC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	-20	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7055955618746	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCTATTTCCAAACGC	5	True	NA	NA	False	TTTAAA	-40	NA	3678094	3791433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3678365_3735869_3735954_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.8	chr4	+	2632	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	-16	847	-16	-846	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACTTGAACATTTTAT	9	True	NA	NA	False	AATACA	-22	NA	3678098	3790766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22857.9	chr4	+	3395	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	-11	3	1	-3	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTCCATCTTGTCTTA	-6	True	NA	NA	False	ACTAAA	-14	NA	3678115	3791609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ES.22858.1	chr4	-	5310	1	FSM	ENSMUSG00000077271.2	ENSMUST00000104083.2	137	1	-1781	-3392	-1781	3392	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3798364	3793054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3793100_3798400
ES.22859.1	chr4	+	131	1	Intergenic	novelGene_18774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAGCAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	3804116	3804247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_3804100_3804200
ES.2286.1	chr10	+	126	1	FSM	ENSMUSG00000112474.2	ENSMUST00000217912.2	553	1	458	-31	458	31	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTACTCTAGT	NA	False	NA	NA	False	AATAAA	-30	NA	7408813	7408939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7408800_7408900
ES.22860.1	chr4	+	903	1	Intergenic	novelGene_18775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3827436	3828339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_3827400_3828300
ES.22861.1	chr4	-	3641	3	FSM	ENSMUSG00000028234.7	ENSMUST00000103009.5	582	3	81	-3140	81	1	multi-exon	FALSE	canonical	3	6653	junction_2	831.5	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTAGTTGCTCATGTGTG	191	False	NA	NA	False	AATAAA	-25	NA	3835407	3831332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3834684_3834935_3835010_3835191
ES.22861.2	chr4	-	3390	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	63	253	63	-253	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTTCCACTTGGATGT	-4	False	NA	-10	True	ATTAAA	-13	NA	3835602	3831586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ES.22861.4	chr4	-	648	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	-65	3123	-65	13	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGGTTTTTTTTTTTT	NA	False	NA	-24	True	AATAAA	-31	NA	3835730	3834456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ES.22861.6	chr4	-	683	3	NIC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	66	0	intron_retention	FALSE	canonical	3	8309	junction_2	3.5	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	-1	True	NA	-40	True	AATAAA	-15	NA	3835599	3834472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3834684_3834935_3835292_3835483
ES.22861.8	chr4	-	483	4	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3918.55112112741	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATTTTGCTGGCTTTTG	-2	True	NA	-42	True	AATAAA	-13	NA	3835600	3834474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3834684_3834935_3834989_3835187_3835292_3835483
ES.22862.1	chr4	+	2366	1	Antisense	novelGene_ENSMUSG00000003282.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAATGCCCATTGCTATT	NA	False	NA	NA	False	NA	NA	NA	3900976	3903342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_3901000_3903300
ES.22863.1	chr4	-	5869	1	Genic_Genomic	ENSMUSG00000003282.10	novel	NA	NA	NA	NA	33739	2221	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAACCTCTGTACAGTTG	NA	False	NA	NA	False	TATAAA	-24	NA	3904643	3898774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_3898800_3904600
ES.22863.2	chr4	-	4051	5	NNC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	20	-402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.92028643696715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGCCATATATGTGTG	15	True	NA	NA	False	AATAAA	-16	NA	3938362	3901397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3904948_3905655_3905806_3908905_3909003_3915620_3915726_3938213
ES.22863.3	chr4	-	4134	5	NNC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	-6	-402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.92028643696715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGCCATATATGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	3938411	3901397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3904948_3905621_3905806_3908905_3909003_3915620_3915726_3938213
ES.22863.4	chr4	-	4836	4	FSM	ENSMUSG00000003282.10	ENSMUST00000151543.2	669	4	-17	-4150	-17	-403	multi-exon	FALSE	canonical	2	2	junction_1	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCGCCATATATGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	3938440	3901398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3905806_3908905_3909003_3915620_3915726_3938213
ES.22863.5	chr4	-	3975	5	NNC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	3	-404	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.29903810567666	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGCGCCATATATGTG	-2	True	NA	NA	False	AATAAA	-14	NA	3938379	3901399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_3904948_3907347_3907407_3908905_3909003_3915620_3915726_3938213
ES.22863.6	chr4	-	3895	4	FSM	ENSMUSG00000003282.10	ENSMUST00000137439.8	452	4	47	-3490	24	-404	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGCGCCATATATGTG	19	True	NA	NA	False	AATAAA	-14	NA	3938358	3901399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3904948_3908905_3909003_3915620_3915726_3938213
ES.22863.7	chr4	-	4315	5	NIC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	2	-406	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATGGCGCCATATATG	NA	False	NA	NA	False	AATAAA	-12	NA	3938421	3901401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3904948_3905446_3905806_3908905_3909003_3915620_3915726_3938213
ES.22863.8	chr4	-	3874	5	NIC	ENSMUSG00000003282.10	novel	4774	6	NA	NA	1	-830	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAATTATATATGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	3938404	3901825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_3904948_3905446_3905806_3908905_3909003_3915620_3915726_3938213
ES.22864.1	chr4	+	637	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	-113	0	-113	0	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938774	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ES.22864.10	chr4	+	722	6	NIC	ENSMUSG00000042198.13	novel	711	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	204.516014042911	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938852	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3942987_3943027_3943387
ES.22864.11	chr4	+	4668	1	Genic_Genomic	ENSMUSG00000042198.13	novel	NA	NA	NA	NA	-29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	28	True	ATTAAA	-21	NA	3938858	3943526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_3938900_3943500
ES.22864.12	chr4	+	3246	2	ISM	ENSMUSG00000042198.13	ENSMUST00000119403.2	695	3	-1987	4	-21	0	intron_retention	FALSE	canonical	3	436	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	NA	False	NA	23	True	ATTAAA	-16	NA	3938866	3943521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3941312_3942720
ES.22864.13	chr4	+	485	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	-8	-51	-6	0	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938881	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ES.22864.14	chr4	+	1245	4	NNC	ENSMUSG00000042198.13	novel	524	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	182.550449647944	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	NA	False	NA	23	True	ATTAAA	-16	NA	3938887	3943521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3939118_3939378_3939527_3941245_3941312_3942720
ES.22864.15	chr4	+	626	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	-6	0	-6	0	multi-exon	FALSE	canonical	3	48	junction_1	167.916645988419	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	-11	True	NA	23	True	ATTAAA	-16	NA	3938907	3943521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ES.22864.16	chr4	+	2953	3	NIC	ENSMUSG00000042198.13	novel	711	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	280	junction_1	78	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	-4	True	NA	25	True	ATTAAA	-18	NA	3938914	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_3939132_3939378_3941312_3942720
ES.22864.17	chr4	+	8845	4	ISM	ENSMUSG00000042198.13	ENSMUST00000150618.8	2546	9	1	-88	1	88	intron_retention	FALSE	canonical	3	280	junction_1	77.5857948052062	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCAGTCCCAACTTTA	-4	True	NA	NA	False	AATAAA	-19	NA	3938914	3951134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720
ES.22864.2	chr4	+	659	3	ISM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-121	2111	-95	-2	5prime_fragment	FALSE	canonical	3	280	junction_1	86	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATTCCTGGCCAG	NA	False	NA	NA	False	AATAAA	-14	NA	3938792	3941417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3939132_3939378_3939527_3941245
ES.22864.3	chr4	+	1125	4	FSM	ENSMUSG00000042198.13	ENSMUST00000121210.8	548	4	-104	-473	-78	0	multi-exon	FALSE	canonical	3	70	junction_1	176.426251510999	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938809	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720
ES.22864.4	chr4	+	1561	3	ISM	ENSMUSG00000042198.13	ENSMUST00000119307.8	889	4	-85	-19	-53	0	intron_retention	FALSE	canonical	3	436	junction_2	8	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938834	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3939527_3941245_3941312_3942720
ES.22864.5	chr4	+	2331	2	NNC	ENSMUSG00000042198.13	novel	279	2	NA	NA	-52	-2	intron_retention	FALSE	canonical	1	1	junction_1	0	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATTCCTGGCCAG	NA	False	NA	NA	False	AATAAA	-14	NA	3938835	3941417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3939527_3939777
ES.22864.6	chr4	+	992	4	FSM	ENSMUSG00000042198.13	ENSMUST00000119307.8	889	4	-84	-19	-52	0	multi-exon	FALSE	canonical	3	416	junction_3	14.7271480229163	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938835	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3939527_3941245_3941312_3942720_3942820_3943387
ES.22864.7	chr4	+	749	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-75	-2	-49	2	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGGGTTTTTTTTTGTT	NA	False	NA	32	True	ATTAAA	-25	NA	3938838	3943530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ES.22864.8	chr4	+	1305	4	ISM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	-70	5	-44	0	intron_retention	FALSE	canonical	3	280	junction_1	77.5857948052062	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938843	3943523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720
ES.22864.9	chr4	+	1050	6	NNC	ENSMUSG00000042198.13	novel	711	6	NA	NA	-36	-1	intron_retention	FALSE	canonical	1	3	junction_2	177.907166803364	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACATGTTTTGGGGTT	NA	False	NA	22	True	ATTAAA	-15	NA	3938851	3943520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_3939132_3939378_3939527_3940766_3940884_3941245_3941312_3942720_3943027_3943387
ES.22865.1	chr4	-	502	1	FSM	ENSMUSG00000068240.6	ENSMUST00000089430.6	504	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTATCCAAGGCTACA	6	True	NA	NA	False	AATAAA	-39	NA	3973595	3973093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_3973100_3973600
ES.22866.1	chr4	-	1336	3	NNC	ENSMUSG00000045573.10	novel	721	3	NA	NA	-39	-6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGATATTGTAAGAACT	149	False	NA	-13	True	AATAAA	-45	NA	4138858	4133536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_4134508_4138005_4138147_4138634
ES.22867.1	chr4	-	5249	1	Intergenic	novelGene_18776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	4242326	4237077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_4237100_4242300
ES.22868.1	chr4	+	2706	3	Intergenic	novelGene_18778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGATTTTCCTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	4556346	4566853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_4556769_4562881_4563015_4564702
ES.22869.1	chr4	-	7237	9	Intergenic	novelGene_18777	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGATTGACTATAGAGTA	223	False	NA	NA	False	AATAAA	-18	NA	4556412	4533634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_4537627_4537748_4537857_4542756_4542856_4544428_4544596_4545449_4545526_4546448_4546633_4547528_4549919_4550777_4550916_4556329
ES.2287.1	chr10	+	2805	9	NNC	ENSMUSG00000019796.13	novel	652	5	NA	NA	-23018	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.67471876819	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCTTTCTTATA	NA	False	NA	15	True	AATAAA	-22	NA	7442545	7501239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7442592_7442940_7443057_7448084_7448147_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.10	chr10	+	3298	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.9107537546936	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7278	False	NA	23	True	AATAAA	-30	NA	7465593	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480013_7480087_7480148_7484307_7484404_7499393
ES.2287.12	chr10	+	2650	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	22	714	22	-714	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCTAATGTCAGGATG	7287	False	NA	NA	False	ATTAAA	-15	NA	7465602	7500533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.14	chr10	+	2916	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.9107537546936	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7294	False	NA	23	True	AATAAA	-30	NA	7465609	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393_7499779_7500219
ES.2287.15	chr10	+	3038	6	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	35	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	133.047961277127	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTTTCTTAT	7300	False	NA	14	True	AATAAA	-21	NA	7465615	7501238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7478592_7478719_7479937_7480148_7484307_7484380_7484487_7484511_7499393
ES.2287.16	chr10	+	3048	5	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	110.892966413565	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7300	False	NA	23	True	AATAAA	-30	NA	7465615	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.17	chr10	+	2030	6	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	35	-106	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	101.478273536753	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTGTCATGGAGAAAC	7300	False	NA	NA	False	AATAAA	-18	NA	7465615	7484225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7483596
ES.2287.18	chr10	+	3132	6	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	35	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	101.57361862216	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTTTCTTAT	7300	False	NA	14	True	AATAAA	-21	NA	7465615	7501238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7484307_7484404_7499393
ES.2287.19	chr10	+	3225	6	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	106.905565804592	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7300	False	NA	23	True	AATAAA	-30	NA	7465615	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7471867_7472029_7474470_7474613_7479937_7480148_7484307_7484404_7499393
ES.2287.2	chr10	+	210	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAATTTCTCTTAACAT	NA	False	NA	NA	False	NA	NA	NA	7450960	7451170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7451000_7451200
ES.2287.20	chr10	+	3819	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	44	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	120.620842954699	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCTTTAAAAAAAATTCT	7309	False	NA	7	True	AATAAA	-14	NA	7465624	7501231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7498219_7498713_7499393
ES.2287.21	chr10	+	1966	6	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	45	-110	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	126.492055086476	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGTGTGTCATGGAG	7310	False	NA	NA	False	AATAAA	-14	NA	7465625	7484221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479987_7480148_7483596
ES.2287.22	chr10	+	1052	2	ISM	ENSMUSG00000019796.13	ENSMUST00000134346.8	1492	6	62	12164	45	-12164	5prime_fragment	FALSE	canonical	3	257	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGATTGTTCTGTAA	7310	False	NA	NA	False	CATAAA	-12	NA	7465625	7472167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7466378_7471867
ES.2287.23	chr10	+	3272	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	45	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.9107537546936	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCTTTAAAAAAAATTC	7310	False	NA	6	True	AATAAA	-13	NA	7465625	7501230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393_7499623_7499674
ES.2287.24	chr10	+	3337	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	120.844308673497	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7313	False	NA	23	True	AATAAA	-30	NA	7465628	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484380_7484487_7484511_7499393
ES.2287.25	chr10	+	2979	5	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	54	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	108.322146858341	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCCTTTAAAAAAAATTC	7319	False	NA	6	True	AATAAA	-13	NA	7465634	7501230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7471867_7472029_7474470_7474613_7484307_7484404_7499393
ES.2287.26	chr10	+	3186	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	56	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.9107537546936	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGCCTTTAAAAAAAATT	7321	False	NA	5	True	AATAAA	-12	NA	7465636	7501229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466128_7466253_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.27	chr10	+	3328	7	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	57	-16	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	98.2813421877328	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCTTTAAAAAAAATTCT	7322	False	NA	7	True	AATAAA	-14	NA	7465637	7501231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7471867_7472029_7474455_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.28	chr10	+	2875	4	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	70	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	122.589649735295	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTTTCTTAT	7335	False	NA	14	True	AATAAA	-21	NA	7465650	7501238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7471867_7472029_7474470_7474613_7499393
ES.2287.3	chr10	+	3414	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	-28	0	-11	0	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7237	False	NA	23	True	AATAAA	-30	NA	7465552	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.30	chr10	+	3063	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.9107537546936	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7351	False	NA	23	True	AATAAA	-30	NA	7465666	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393_7500313_7500549
ES.2287.31	chr10	+	2934	6	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	-37	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	106.001132069427	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGCCTTTAAAAAAAATT	7538	False	NA	5	True	AATAAA	-12	NA	7465853	7501229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7466378_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.34	chr10	+	251	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCCCGCCAATTCATCC	NA	False	NA	NA	False	NA	NA	NA	7493205	7493456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7493200_7493500
ES.2287.35	chr10	+	2993	1	NIC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	26307	0	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	NA	False	NA	23	True	AATAAA	-30	NA	7498254	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7498300_7501200
ES.2287.4	chr10	+	2737	3	FSM	ENSMUSG00000019796.13	ENSMUST00000135907.8	976	3	-309	-1452	1	-9	multi-exon	FALSE	canonical	3	11	junction_1	106	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTTTCTTAT	7266	False	NA	14	True	AATAAA	-21	NA	7465581	7501238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7466378_7484307_7484404_7499393
ES.2287.5	chr10	+	3815	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	2	-431	2	431	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTGCATCACAGCCT	7267	False	NA	NA	False	AATAAA	-18	NA	7465582	7501678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ES.2287.6	chr10	+	3321	7	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.9327551684409	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7276	False	NA	23	True	AATAAA	-30	NA	7465591	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479991_7480148_7484307_7484404_7499393
ES.2287.8	chr10	+	3214	7	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.9327551684409	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTCTTTCTTAT	7278	False	NA	14	True	AATAAA	-21	NA	7465593	7501238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7480087_7480148_7484307_7484404_7499393
ES.2287.9	chr10	+	3320	8	NNC	ENSMUSG00000019796.13	novel	3386	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.9107537546936	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7278	False	NA	23	True	AATAAA	-30	NA	7465593	7501247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393_7499880_7499932
ES.22870.1	chr4	+	1290	4	Intergenic	novelGene_18779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAACTTCCTTATTATG	NA	False	NA	NA	False	AATAAA	-16	NA	4620625	4625478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_4620802_4622545_4622610_4623034_4623094_4624487
ES.22870.2	chr4	+	1778	3	Intergenic	novelGene_18780	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCCTTTTTATTTTTC	NA	False	NA	NA	False	CATAAA	-14	NA	4620654	4625570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_4620802_4622545_4623094_4624487
ES.22870.3	chr4	+	353	4	Intergenic	novelGene_18781	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	2.94392028877595	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGCACATATTATTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	4620708	4631279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_4620802_4622545_4622610_4623034_4623094_4631142
ES.22871.1	chr4	-	168	1	Intergenic	novelGene_18782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATATAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4628322	4628154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_4628200_4628300
ES.22872.1	chr4	-	4377	3	Intergenic	novelGene_18783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGGAATGAAGCAGT	NA	False	NA	NA	False	AATAAA	-22	NA	4674409	4667875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_4668593_4670276_4670368_4670840
ES.22873.1	chr4	-	6549	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-4	-2	-4	2	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTGTTGGTGTTTCT	-31	True	NA	-2	True	AATAAA	-24	NA	4793359	4762481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.10	chr4	-	1766	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	59	4718	59	-4718	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACAAGAAGTCTCATA	32	True	NA	NA	False	AATAAA	-30	NA	4793296	4767201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.2	chr4	-	5228	6	NNC	ENSMUSG00000066324.3	novel	6543	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9896961653863	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGCTGTGTTGGTGTTT	-30	True	NA	-4	True	AATAAA	-22	NA	4793358	4762483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_4765928_4767245_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.3	chr4	-	3185	2	NNC	ENSMUSG00000066324.3	novel	6543	5	NA	NA	27388	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATGCTGTGTTGGTGT	NA	False	NA	-6	True	AATAAA	-20	NA	4765967	4762485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_4763221_4763517
ES.22873.4	chr4	-	6425	6	NNC	ENSMUSG00000066324.3	novel	6543	5	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9896961653863	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATGCTGTGTTGGTGT	8	True	NA	-6	True	AATAAA	-20	NA	4793320	4762485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_4767824_4767904_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.6	chr4	-	5391	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	19	1133	19	-1133	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGTTTGTGGTCATT	-8	True	NA	NA	False	NA	NA	NA	4793336	4763616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.7	chr4	-	5036	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-32	1539	-32	-1539	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTCTGGAGTAACTTT	NA	False	NA	0	True	AATAAA	-27	NA	4793387	4764022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.8	chr4	-	4825	6	NNC	ENSMUSG00000066324.3	novel	6543	5	NA	NA	19	-1550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9896961653863	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTCTCTAATTCTCT	-8	True	NA	-11	True	AATAAA	-16	NA	4793336	4764033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_4765106_4765254_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22873.9	chr4	-	4837	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	-3	1709	-3	-1709	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGCATTTATAGTTGA	-30	True	NA	NA	False	AATAAA	-22	NA	4793358	4764192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ES.22874.1	chr4	-	188	1	Intergenic	novelGene_18784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATATC	NA	False	NA	NA	False	NA	NA	NA	4969881	4969693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_4969700_4969900
ES.22875.1	chr4	-	4212	1	Intergenic	novelGene_18785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	5465078	5460866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_5460900_5465100
ES.22876.1	chr4	+	3270	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-60	0	-29	0	multi-exon	FALSE	canonical	3	35	junction_1	17	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	NA	False	NA	12	True	AATAAA	-21	NA	5644060	5801101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_5644411_5729570_5729658_5798268
ES.22876.10	chr4	+	3289	5	NNC	ENSMUSG00000049119.15	novel	618	4	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.33936116655298	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTACCTGTGCTGATTTC	7	True	NA	6	True	AATAAA	-15	NA	5644179	5801095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5678902_5678999_5729570_5729658_5731800_5731849_5798268
ES.22876.11	chr4	+	2300	5	NNC	ENSMUSG00000049119.15	novel	618	4	NA	NA	-10	104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.0835806121655	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGAGAGCAGAATCTT	7	True	NA	6	True	ATTAAA	-20	NA	5644179	5800050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5678902_5678999_5694364_5694469_5729570_5729658_5798268
ES.22876.12	chr4	+	3256	5	NNC	ENSMUSG00000049119.15	novel	618	4	NA	NA	59	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.33936116655298	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTGCTGATTTCTTT	20	False	NA	9	True	AATAAA	-18	NA	5644293	5801098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5678902_5678999_5729570_5729658_5747044_5747171_5798268
ES.22876.13	chr4	+	3687	1	Intergenic	novelGene_18786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATCTTAATATACAAAGC	6944	False	NA	NA	False	NA	NA	NA	5779811	5783498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_5779800_5783500
ES.22876.14	chr4	+	9970	1	NIC	ENSMUSG00000049119.15	novel	3210	3	NA	NA	-8006	101	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	3403	False	NA	3	True	ATTAAA	-17	NA	5790077	5800047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_5790100_5800000
ES.22876.2	chr4	+	1953	5	NNC	ENSMUSG00000049119.15	novel	850	5	NA	NA	-5	7293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAGGTGTACTGGCTA	-22	True	NA	NA	False	AATAAA	-28	NA	5644084	5808394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5678902_5678999_5729570_5729658_5806224_5806308_5807033
ES.22876.3	chr4	+	2194	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	-35	1051	-4	104	multi-exon	FALSE	canonical	3	35	junction_1	17	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGAGAGCAGAATCTT	-21	True	NA	6	True	ATTAAA	-20	NA	5644085	5800050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_5644411_5729570_5729658_5798268
ES.22876.4	chr4	+	2672	4	NNC	ENSMUSG00000049119.15	novel	3210	3	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.1701181317288	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTGCTGATTTCTTT	-4	True	NA	9	True	AATAAA	-18	NA	5644102	5801098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5729570_5729658_5798268_5798561_5799113
ES.22876.5	chr4	+	2181	3	NIC	ENSMUSG00000049119.15	novel	618	4	NA	NA	13	99	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTAAGTTGAGAGCAGA	-4	True	NA	1	True	ATTAAA	-15	NA	5644102	5800045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_5644411_5678902_5678999_5798268
ES.22876.6	chr4	+	2265	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	16	-1663	-15	99	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTAAGTTGAGAGCAGA	-1	True	NA	1	True	ATTAAA	-15	NA	5644105	5800045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
ES.22876.7	chr4	+	3311	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	25	-2718	-6	-1	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCTGATTTCTTTGT	8	True	NA	11	True	AATAAA	-20	NA	5644114	5801100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
ES.22876.8	chr4	+	2284	4	NNC	ENSMUSG00000049119.15	novel	3210	3	NA	NA	-6	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.8394724940223	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTCTAAGTTGAGAGCA	8	True	NA	-1	True	ATTAAA	-13	NA	5644114	5800043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5729570_5729658_5747044_5747171_5798268
ES.22876.9	chr4	+	3316	5	NNC	ENSMUSG00000049119.15	novel	618	4	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTGCTGATTTCTTT	6	True	NA	9	True	AATAAA	-18	NA	5644178	5801098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_5644411_5678902_5678999_5729570_5729658_5754486_5754558_5798268
ES.22877.1	chr4	-	3691	1	Antisense	novelGene_ENSMUSG00000049119.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGATTGGACATGTGGC	NA	False	NA	NA	False	NA	NA	NA	5682039	5678348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_5678300_5682000
ES.22878.1	chr4	+	1617	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	-9	5034	-9	-5034	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCACTTTAGCATCAA	NA	False	NA	NA	False	GATAAA	-30	NA	6191088	6216654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.10	chr4	+	4537	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	12	-2203	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	56.4744134542361	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAATACCTTAATCAT	2	True	NA	NA	False	NA	NA	NA	6191109	6219485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198111_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.11	chr4	+	1606	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-5131	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	56.4744134542361	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATATATTTTGTCCTT	5	True	NA	NA	False	TTTAAA	-14	NA	6191112	6216557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198111_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.12	chr4	+	2949	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-3764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.1165132328425	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTAATTTTTACTTTT	5	True	NA	NA	False	NA	NA	NA	6191112	6217924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198085_6202291_6202443_6203776_6203865_6204563_6204674_6208807_6208944_6214638_6214801_6215911
ES.22878.13	chr4	+	4406	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-5676	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	54.1985643260041	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCGTGACACTACAAGAA	5	True	NA	NA	False	AGTAAA	-14	NA	6191112	6216012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6201456_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.14	chr4	+	6730	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	58.0569494117629	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGCCTCCTTTCGTGCC	5	True	NA	12	True	AATAAA	-14	NA	6191112	6221678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6201342_6201456_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.15	chr4	+	2863	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	15	3764	15	-3764	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTAATTTTTACTTTT	5	True	NA	NA	False	NA	NA	NA	6191112	6217924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.16	chr4	+	6282	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	31	329	31	-329	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTCATGTTTATAA	21	False	NA	NA	False	AATAAA	-14	NA	6191128	6221359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.2	chr4	+	6650	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	-8	0	-8	0	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGCCTCAGTGTGAC	NA	False	NA	22	True	AATAAA	-24	NA	6191089	6221688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.3	chr4	+	1758	10	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	5	-5102	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	61.4093731535432	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACAACTGTCATAAA	-5	True	NA	NA	False	AATATA	-20	NA	6191102	6216586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198111_6201342_6201456_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.4	chr4	+	1769	10	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	6	-5054	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	63.940944976161	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTGGTAAGATGTGAT	-4	True	NA	NA	False	CATAAA	-29	NA	6191103	6216634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198085_6201342_6201456_6202291_6202443_6203786_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.5	chr4	+	1495	8	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	6	-5131	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	47.0440523035894	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATATATTTTGTCCTT	-4	True	NA	NA	False	TTTAAA	-14	NA	6191103	6216557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6202291_6202443_6203786_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.6	chr4	+	6452	8	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	6	-5125	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	45.6289381861993	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTGTCCTTGTGTTT	-4	True	NA	NA	False	TTTAAA	-20	NA	6191103	6216563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6201456_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.7	chr4	+	1648	9	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	12	-5066	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	55.7808210767823	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTCATCAGCTCTTG	2	True	NA	NA	False	TATAAA	-34	NA	6191109	6216622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6198085_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.8	chr4	+	10916	8	NNC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	42.9033084685904	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTCGTGCCTCAGT	2	True	NA	17	True	AATAAA	-19	NA	6191109	6221683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6191214_6196410_6196515_6198000_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ES.22878.9	chr4	+	1709	1	NIC	ENSMUSG00000028243.6	novel	6642	8	NA	NA	12	-28870	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAAACAAAGCAA	2	True	NA	NA	False	NA	NA	NA	6191109	6192818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_6191100_6192800
ES.22879.1	chr4	-	3339	6	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATATTCTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	6217922	6201608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6202441_6203774_6203861_6204563_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.2	chr4	-	3333	6	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATATTCTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	6217922	6201608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6202441_6203774_6203861_6204569_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.3	chr4	-	3329	6	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATATTCTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	6217922	6201608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6202441_6203784_6203861_6204563_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.4	chr4	-	3342	6	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATATTCTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	6217922	6201608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6202450_6203784_6203863_6204561_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.5	chr4	-	5008	5	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATATTCTTTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	6218257	6201608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6203861_6204563_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.6	chr4	-	3330	6	Antisense	novelGene_ENSMUSG00000028243.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTAATATTCTTT	NA	False	NA	NA	False	NA	NA	NA	6217920	6201614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_6202441_6203774_6203852_6204555_6204673_6208804_6208942_6214636_6214800_6215910
ES.22879.9	chr4	-	174	1	Intergenic	novelGene_18787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGGTATTTCTTG	NA	False	NA	NA	False	NA	NA	NA	6205344	6205170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_6205200_6205300
ES.2288.1	chr10	-	7083	6	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18820	690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.4145254062516	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGCATCTCTCAGCAC	NA	False	NA	NA	False	NA	NA	NA	7442458	7389671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7442171
ES.2288.11	chr10	-	6112	6	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.3134946367829	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7423588	7390364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7393012_7393082_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7423253
ES.2288.12	chr10	-	6773	5	NIC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	25	junction_3	17.2481883106603	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7423585	7390364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7407209_7423253
ES.2288.13	chr10	-	5894	4	NNC	ENSMUSG00000079685.11	novel	5959	5	NA	NA	-18855	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.9801516952444	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7442493	7390364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7442171
ES.2288.14	chr10	-	5967	5	NNC	ENSMUSG00000079685.11	novel	5959	5	NA	NA	-18794	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.4286387292814	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7442432	7390364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7423253_7423388_7442171
ES.2288.15	chr10	-	6364	6	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18794	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.4145254062516	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGTCTGTTCTCTTA	NA	False	NA	-4	True	ATTAAA	-13	NA	7442432	7390364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7442171
ES.2288.16	chr10	-	3916	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	51	-152	0	152	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAATGGTCTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	7423587	7392885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
ES.2288.17	chr10	-	3751	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	8	56	8	-56	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGAGGGATTATAGAT	NA	False	NA	NA	False	NA	NA	NA	7423630	7393093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
ES.2288.18	chr10	-	3466	4	NIC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	3	-56	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.709270666846	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGAGGGATTATAGAT	NA	False	NA	NA	False	NA	NA	NA	7423584	7393093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7395698_7406339_7406616_7406953_7407209_7423253
ES.2288.19	chr10	-	3660	7	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18794	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.5582124222768	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGAGGGATTATAG	NA	False	NA	NA	False	NA	NA	NA	7442432	7393095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407102_7423253_7423388_7442171
ES.2288.2	chr10	-	7114	7	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18828	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.0190896302642	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTATCTAACTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	7442466	7389782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253_7423388_7442171
ES.2288.21	chr10	-	3159	4	NIC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	14	-60	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	26.1576417557513	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTACTGGAGGGATTAT	NA	False	NA	NA	False	NA	NA	NA	7423573	7393097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7395698_7396417_7396553_7397380_7397485_7423253
ES.2288.22	chr10	-	1412	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	50	2353	-1	792	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATGATTTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	7423588	7395390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
ES.2288.23	chr10	-	1794	3	ISM	ENSMUSG00000079685.11	ENSMUST00000169796.4	1093	5	-243	9225	3	1645	5prime_fragment	FALSE	canonical	3	53	junction_1	7.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGTGGGTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	7423584	7405407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_7406616_7406953_7407209_7423253
ES.2288.24	chr10	-	7506	2	NNC	ENSMUSG00000079685.11	novel	1093	5	NA	NA	7992	-155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCTCTTTGTAACA	NA	False	NA	NA	False	NA	NA	NA	7415349	7407207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7408302_7408937
ES.2288.25	chr10	-	4424	3	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCTATTGAATTTC	NA	False	NA	NA	False	AGTAAA	-13	NA	7442568	7437950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7442062_7442171_7442277_7442360
ES.2288.4	chr10	-	6375	6	NIC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	23.0859264488129	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	-1	True	ATTAAA	-16	NA	7423629	7390361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407102_7423253
ES.2288.6	chr10	-	6498	8	NNC	ENSMUSG00000079685.11	novel	3815	6	NA	NA	-18875	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.5591369419648	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	-1	True	ATTAAA	-16	NA	7442513	7390361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253_7423388_7442171_7442277_7442360
ES.2288.9	chr10	-	6181	5	FSM	ENSMUSG00000079685.11	ENSMUST00000218087.2	5959	5	-224	2	2	-2	multi-exon	FALSE	canonical	0	0	junction_4	24.9098374141623	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGTTCTCTTAC	NA	False	NA	-3	True	ATTAAA	-14	NA	7423585	7390363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7423253
ES.22880.11	chr4	+	2235	10	NIC	ENSMUSG00000028249.16	novel	2745	9	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	182.74336048806	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTCTGTCTGTGCCTGCA	-7	True	NA	15	True	ATTAAA	-20	NA	6365701	6395657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_6365760_6367639_6367809_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.12	chr4	+	1997	10	NIC	ENSMUSG00000028249.16	novel	2745	9	NA	NA	1	-224	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	182.74336048806	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAGTGGGTAATATCTA	5	True	NA	7	True	AATAAA	-19	NA	6365713	6395431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_6365760_6367639_6367809_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.13	chr4	+	3873	8	NIC	ENSMUSG00000028249.16	novel	2745	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	359	junction_3	42.9118698197663	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	7	True	NA	13	True	ATTAAA	-18	NA	6365715	6395655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_6365760_6377076_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.14	chr4	+	2170	9	NIC	ENSMUSG00000028249.16	novel	2745	9	NA	NA	40	-5	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	147.263316460685	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATTTCCGTCTGTCTGT	21	False	NA	8	True	ATTAAA	-13	NA	6365752	6395650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_6365922_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.2	chr4	+	2118	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	3	624	3	5	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTGTGCCTGCATCA	7852	False	NA	18	True	ATTAAA	-23	NA	6365652	6395660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.4	chr4	+	2544	9	NNC	ENSMUSG00000028249.16	novel	2745	9	NA	NA	6	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.673466915506	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGAAATTGTGTT	1	True	NA	NA	False	NA	NA	NA	6365682	6396112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6365764_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.6	chr4	+	2716	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	34	-5	7	5	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGACTTAATGTTATTAA	2	True	NA	NA	False	TATAAA	-18	NA	6365683	6396289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.7	chr4	+	2244	10	NNC	ENSMUSG00000028249.16	novel	2086	9	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.993480920665	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCGTCTGTCTGTGC	9	False	NA	10	True	ATTAAA	-15	NA	6365690	6395652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6365760_6367639_6367809_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392939_6393118_6393636_6393729_6394509
ES.22880.8	chr4	+	1853	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	44	848	-14	-219	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTAATATCTAATTTG	12	False	NA	12	True	AATAAA	-24	NA	6365693	6395436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22880.9	chr4	+	2370	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	44	331	-14	298	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATGCTTCAGAAAATT	12	False	NA	NA	False	NA	NA	NA	6365693	6395953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ES.22881.1	chr4	-	3561	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	-53	-1	-53	1	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTATCTTATTTAAAT	-28	True	NA	NA	False	ATTAAA	-22	NA	6454324	6396205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.10	chr4	-	3480	30	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	21.895329860017	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	16	True	NA	NA	False	ATTAAA	-18	NA	6454280	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435112_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.13	chr4	-	3461	31	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	58	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	22.2041037248123	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCACTCTTATCTTAT	-5	True	NA	NA	False	ATTAAA	-16	NA	6454197	6396211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424845_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.14	chr4	-	4928	30	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-53	-5	intron_retention	FALSE	canonical	0	0	junction_15	34.0932483613512	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCACTCTTATCTTAT	-28	True	NA	NA	False	ATTAAA	-16	NA	6454324	6396211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6420141_6420493_6420595_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6454174
ES.22881.15	chr4	-	3331	5	NNC	ENSMUSG00000028245.16	novel	4423	30	NA	NA	-7832	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.1647863636343	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCACTCTTATCTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	6406838	6396211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6401269_6406786
ES.22881.16	chr4	-	9078	5	NIC	ENSMUSG00000028245.16	novel	4423	30	NA	NA	-9748	-5	intron_retention	FALSE	canonical	3	101	junction_2	6.42261628933256	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCACTCTTATCTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	6408754	6396211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6406871_6408557
ES.22881.17	chr4	-	4911	30	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-29	-5	intron_retention	FALSE	canonical	3	82	junction_12	11.6817692859608	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCACTCTTATCTTAT	-4	True	NA	NA	False	ATTAAA	-16	NA	6454300	6396211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.19	chr4	-	5376	29	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	2	-7	intron_retention	FALSE	canonical	3	87	junction_28	10.773408306131	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	27	True	NA	NA	False	ATTAAA	-14	NA	6454269	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417878_6418260_6418382_6418471_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.2	chr4	-	4319	25	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-2378	0	intron_retention	FALSE	canonical	0	0	junction_4	23.0494260593765	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTTATCTTATTTAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	6435076	6396206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406762_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056
ES.22881.20	chr4	-	3491	31	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	21.970586397879	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	26	True	NA	NA	False	ATTAAA	-14	NA	6454270	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418516_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.21	chr4	-	3528	32	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	43	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_30	27.818386780691	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	-20	True	NA	NA	False	ATTAAA	-14	NA	6454212	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453486_6453574_6453984
ES.22881.22	chr4	-	3523	18	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-91	-7	intron_retention	FALSE	canonical	3	91	junction_7	8.3728015758391	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	6424079	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321
ES.22881.23	chr4	-	5381	29	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	5	-7	intron_retention	FALSE	canonical	0	0	junction_4	22.3901798353927	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	46	False	NA	NA	False	ATTAAA	-14	NA	6454250	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406762_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417878_6418260_6418382_6418471_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.24	chr4	-	3375	31	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-66	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	21.8290326553117	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	29	True	NA	NA	False	ATTAAA	-14	NA	6454163	6396213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408665_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.25	chr4	-	3704	32	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	28.1582786698385	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGCACTCTTATCT	-3	True	NA	NA	False	ATTAAA	-13	NA	6454299	6396214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6445042_6445220_6453984
ES.22881.26	chr4	-	3458	30	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	22.3682295504663	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGCACTCTTATCT	18	True	NA	NA	False	ATTAAA	-13	NA	6454278	6396214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.27	chr4	-	3598	32	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.0959038419324	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGCACTCTTATCT	16	True	NA	NA	False	ATTAAA	-13	NA	6454280	6396214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418562_6419434_6419487_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.29	chr4	-	3552	31	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-38	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	22.1817993459102	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATGAAAGCACTCTTA	-13	True	NA	NA	False	ATTAAA	-10	NA	6454309	6396217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398978_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.3	chr4	-	3524	31	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.7124900051151	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTTATCTTATTTAAA	21	True	NA	NA	False	ATTAAA	-21	NA	6454275	6396206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396831_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.30	chr4	-	3640	30	ISM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	59	1309	43	-747	5prime_fragment	FALSE	canonical	3	82	junction_11	11.740252616963	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGACATAAAATCACAT	-20	True	NA	NA	False	NA	NA	NA	6454212	6397515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.31	chr4	-	4881	1	Genic_Genomic	ENSMUSG00000028245.16	novel	NA	NA	NA	NA	-3590	-7124	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	4379	False	NA	NA	False	NA	NA	NA	6449917	6445036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_6445000_6449900
ES.22881.4	chr4	-	5883	28	NIC	ENSMUSG00000028245.16	novel	4423	30	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	82	junction_12	11.789302537512	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	24	True	NA	NA	False	ATTAAA	-18	NA	6454272	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.5	chr4	-	5247	30	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-49	-3	intron_retention	FALSE	canonical	0	0	junction_12	22.2547674220227	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	-24	True	NA	NA	False	ATTAAA	-18	NA	6454320	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417431_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.6	chr4	-	3252	30	NIC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	22.5894443586561	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	186	False	NA	NA	False	ATTAAA	-18	NA	6454110	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.8	chr4	-	3536	32	NNC	ENSMUSG00000028245.16	novel	3507	31	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	32.9123643223358	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	47	False	NA	NA	False	ATTAAA	-18	NA	6454249	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418384_6418471_6418524_6419434_6419487_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ES.22881.9	chr4	-	4734	5	NNC	ENSMUSG00000028245.16	novel	525	5	NA	NA	-4375	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.1647863636343	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTCTTATCTTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	6403381	6396209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6399619
ES.22882.1	chr4	-	202	1	Intergenic	novelGene_18788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTTAAAAAGATTCATG	NA	False	NA	NA	False	NA	NA	NA	6517070	6516868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_6516900_6517100
ES.22883.1	chr4	+	293	1	Intergenic	novelGene_18789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTAGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	6566792	6567085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_6566800_6567100
ES.22884.1	chr4	+	3254	9	NNC	ENSMUSG00000086052.2	novel	653	4	NA	NA	-1354	286393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGCTCAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6686814	6990553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_6688464_6688819_6688970_6697408_6697797_6711457_6711541_6722139_6722369_6741285_6741568_6822904_6823148_6842360_6842427_6990389
ES.22885.1	chr4	+	3426	1	Intergenic	novelGene_18791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	8133523	8136949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8133500_8136900
ES.22885.2	chr4	+	3348	2	Intergenic	novelGene_18790	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	8133523	8136948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8133939_8134015
ES.22886.1	chr4	+	1069	4	Antisense	novelGene_ENSMUSG00000041261.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCCTGGTCAAGGA	NA	False	NA	NA	False	NA	NA	NA	8150820	8162198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_8150972_8157280_8157428_8159142_8159296_8161580
ES.22887.1	chr4	+	231	1	Intergenic	novelGene_18792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGAAGATACTGTTACTA	NA	False	NA	NA	False	NA	NA	NA	8181116	8181347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8181100_8181300
ES.22888.1	chr4	-	5457	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-47	-1557	-47	1557	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACATTCACAGAGTT	NA	False	NA	NA	False	NA	NA	NA	8239088	8141804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ES.22888.2	chr4	-	4978	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-32	-1093	-32	1093	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTATTGTTAAATTATTC	NA	False	NA	NA	False	NA	NA	NA	8239073	8142268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ES.22888.3	chr4	-	3852	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-8	9	-8	-9	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAAATCTATGTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	8239049	8143370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ES.22888.4	chr4	-	2051	10	NNC	ENSMUSG00000041261.10	novel	3853	9	NA	NA	0	-1916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.833221775543	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTGCACTCTCAATTT	-1	True	NA	NA	False	AATAAA	-17	NA	8239041	8145277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8220351_8220466_8221549_8221675_8237918_8238111_8238851
ES.22888.5	chr4	-	1937	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	-2	1918	-2	-1918	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTGCACTCTCAAT	-3	True	NA	NA	False	AATAAA	-15	NA	8239043	8145279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ES.22888.6	chr4	-	1454	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	1	2398	1	-2398	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTATCTCGTGTTGT	0	True	NA	NA	False	AATACA	-15	NA	8239040	8145759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ES.22888.7	chr4	-	571	3	NNC	ENSMUSG00000041261.10	novel	3853	9	NA	NA	89157	-2436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGCTTAGAACATCAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	8149884	8145797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_8146217_8149364_8149432_8149799
ES.22888.8	chr4	-	3319	1	FSM	ENSMUSG00000079993.3	ENSMUST00000116110.3	460	1	-412	-2447	-412	2447	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCGTTTCTGGAC	NA	False	NA	NA	False	ATTAAA	-14	NA	8167765	8164446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_8164400_8167800
ES.22888.9	chr4	-	2691	1	Antisense	novelGene_ENSMUSG00002076441.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	2934	False	NA	NA	False	NA	NA	NA	8236106	8233415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_8233400_8236100
ES.22889.1	chr4	+	1221	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-67	979	-67	-979	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGAGTATTTTAAATCA	NA	False	NA	13	True	ATTAAA	-13	NA	8535576	8606799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.10	chr4	+	1878	7	NIC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	-1	-188	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	428.568029087047	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAGTAGAAAAGTTTTA	-18	True	NA	12	True	AATAAA	-22	NA	8535642	8607590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8535909_8561151_8561224_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.13	chr4	+	1078	9	NNC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	3	-1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	511.9792323669	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGACAGATTTTGGAG	-14	True	NA	17	True	AATAAA	-16	NA	8535646	8606664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8584943_8585006_8604373_8604443_8606407
ES.22889.14	chr4	+	1946	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	9	178	9	-178	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTAGTTGTTTACT	-8	True	NA	22	True	AATAAA	-32	NA	8535652	8607600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.15	chr4	+	2226	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	17	-110	17	110	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTTCAGTGAAGACCC	0	True	NA	NA	False	AATACA	-18	NA	8535660	8607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.16	chr4	+	1936	9	NNC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	44	-197	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	510.902082105759	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTGTTCAAAGTAGA	27	True	NA	3	True	AATAAA	-13	NA	8535687	8607581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8584943_8584988_8604373_8604443_8606407
ES.22889.17	chr4	+	901	7	NIC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	49	-1115	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	428.568029087047	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGACAGATTTTGGA	32	True	NA	16	True	AATAAA	-15	NA	8535692	8606663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8535909_8561151_8561224_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.19	chr4	+	177	1	Intergenic	novelGene_18793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAGGATAGAT	NA	False	NA	NA	False	NA	NA	NA	8550726	8550903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8550700_8550900
ES.22889.2	chr4	+	1102	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-67	1098	-67	-1098	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATTGTATTCATATCTA	NA	False	NA	33	True	AATAAA	-32	NA	8535576	8606680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.20	chr4	+	7393	3	Intergenic	novelGene_18795	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	8588989	8597319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8590620_8590687_8594571_8595439
ES.22889.3	chr4	+	2118	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-46	61	-46	-61	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATGAGCACATTCACT	NA	False	NA	25	True	AATAAA	-25	NA	8535597	8607717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.5	chr4	+	1590	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-29	572	-29	-572	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTATTTGTCCACAAG	-46	True	NA	NA	False	ACTAAA	-32	NA	8535614	8607206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.6	chr4	+	2633	12	NNC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	-16	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	586.988771768096	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTTTTAGTTGTTTA	-33	True	NA	20	True	AATAAA	-30	NA	8535627	8607598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8535909_8561151_8561224_8563201_8563336_8564934_8565344_8568785_8568847_8572118_8572179_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ES.22889.8	chr4	+	1643	4	NIC	ENSMUSG00000047187.10	novel	2133	8	NA	NA	-13	-187	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	544.062700634975	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGTAGAAAAGTTTTAG	-30	True	NA	13	True	AATAAA	-23	NA	8535630	8607591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8535909_8582381_8582494_8604373_8604443_8606407
ES.22889.9	chr4	+	838	6	ISM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	-11	25151	-11	-25151	5prime_fragment	FALSE	canonical	3	1086	junction_5	75.8482695913361	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTACATTGTCTTCTG	-28	True	NA	NA	False	AATAAA	-15	NA	8535632	8582627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381
ES.2289.1	chr10	-	2264	3	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGAAACAATTGTA	NA	False	NA	NA	False	NA	NA	NA	7493339	7470397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7472107_7478571_7478752_7492964
ES.2289.2	chr10	-	3009	1	Antisense	novelGene_ENSMUSG00000019796.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	7480688	7477679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_7477700_7480700
ES.2289.3	chr10	-	8002	1	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTGTCTTGGCTTCA	NA	False	NA	NA	False	NA	NA	NA	7495470	7487468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7487500_7495500
ES.22890.1	chr4	-	176	1	Intergenic	novelGene_18794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTTTTTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8554090	8553914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_8553900_8554100
ES.22891.1	chr4	+	176	1	Intergenic	novelGene_18796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTAGTTGATC	NA	False	NA	NA	False	NA	NA	NA	8643785	8643961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8643800_8644000
ES.22892.1	chr4	-	158	1	Intergenic	novelGene_18797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGTAAAAAAAAAAA	3238	False	NA	NA	False	NA	NA	NA	8645210	8645052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_8645100_8645200
ES.22893.1	chr4	-	1723	1	Intergenic	novelGene_18798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTAAATCTGTGCTGG	1018	False	NA	NA	False	AATAAA	-15	NA	8647430	8645707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_8645700_8647400
ES.22894.1	chr4	+	174	1	Intergenic	novelGene_18799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAATCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	8653560	8653734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8653600_8653700
ES.22895.1	chr4	-	183	1	Intergenic	novelGene_18800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCAAAGCC	7478	False	NA	NA	False	NA	NA	NA	8666246	8666063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_8666100_8666200
ES.22896.11	chr4	+	9614	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.9172782211122	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGGAAA	12	True	NA	NA	False	NA	NA	NA	8690438	8866802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838559_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.12	chr4	+	9548	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	18.7753626855436	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGGAAA	12	True	NA	NA	False	NA	NA	NA	8690438	8866802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862567_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.13	chr4	+	10429	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-30	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.7402045499958	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGATGTAGTTATAGAA	13	True	NA	6	True	AATAAA	-16	NA	8690439	8867649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801330_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859075_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.14	chr4	+	2398	3	FSM	ENSMUSG00000041235.13	ENSMUST00000127476.8	2381	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	49	junction_1	6	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAGAAAAAGAAA	26	True	NA	NA	False	NA	NA	NA	8690452	8785591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8690776_8751323_8753149_8785341
ES.22896.15	chr4	+	11618	37	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-17	-7	intron_retention	FALSE	canonical	3	42	junction_5	13.5454197078469	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTAGTTATAGAATGC	26	True	NA	9	True	AATAAA	-19	NA	8690452	8867652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.16	chr4	+	9618	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	16.9436827662401	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGGAAA	31	False	NA	NA	False	NA	NA	NA	8690457	8866802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852663_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.18	chr4	+	7501	32	NIC	ENSMUSG00000041235.13	novel	741	4	NA	NA	-9	-1682	combination_of_known_junctions	FALSE	canonical	3	42	junction_5	12.1172729543473	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATCAAGTGTACAGAAT	34	False	NA	NA	False	AGTAAA	-11	NA	8690460	8856936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673
ES.22896.2	chr4	+	9725	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-46	15	combination_of_known_junctions	TRUE	canonical	3	42	junction_5	13.3684101547544	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAGTCATGTTATGCAG	NA	False	NA	NA	False	NA	NA	NA	8690359	8866825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.21	chr4	+	9803	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-6	-172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.8298319434046	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTATATATTTAATTT	37	False	NA	NA	False	NA	NA	NA	8690463	8867052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828364_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.23	chr4	+	10527	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	16	94	combination_of_known_junctions	FALSE	canonical	3	42	junction_5	13.3684101547544	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTACCGTGTCTTCT	59	False	NA	110	True	AATACA	-18	NA	8690485	8867753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.24	chr4	+	9554	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	20	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	16.6525092049089	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGTCCAAGTCATG	63	False	NA	NA	False	NA	NA	NA	8690489	8866817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863941_8864050_8864200_8864306_8865737
ES.22896.26	chr4	+	10462	38	FSM	ENSMUSG00000041235.13	ENSMUST00000051558.10	10216	38	-254	8	190	-8	multi-exon	FALSE	canonical	0	0	junction_1	18.7870306351923	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	29	False	NA	8	True	AATAAA	-18	NA	8691110	8867651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.27	chr4	+	10640	37	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-115	-10	intron_retention	FALSE	canonical	0	0	junction_1	18.9917745353087	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAGATGTAGTTATAGAA	168	False	NA	6	True	AATAAA	-16	NA	8691249	8867649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.29	chr4	+	9330	38	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-2	-36	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.8081165825718	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAGAGAAAAAAA	21	True	NA	NA	False	NA	NA	NA	8691362	8866774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.3	chr4	+	10422	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	16.8558534483172	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGTTATAGAATGCAG	-13	True	NA	11	True	AATAAA	-21	NA	8690413	8867654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862567_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.30	chr4	+	164	1	Intergenic	novelGene_18801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCAGAGCAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	8729495	8729659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8729500_8729700
ES.22896.31	chr4	+	9228	36	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	1030	-5	intron_retention	FALSE	canonical	3	11	junction_29	16.1736495193729	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGTTATAGAATGCAG	127	False	NA	11	True	AATAAA	-21	NA	8752467	8867654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.33	chr4	+	6601	33	NNC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-34029	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.282323655617	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAAAGTCCAAGT	44	False	NA	NA	False	NA	NA	NA	8806292	8866813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833911_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.35	chr4	+	5329	23	NIC	ENSMUSG00000041235.13	novel	9444	38	NA	NA	-1772	-37	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	12.8510217621238	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAGAAGAGAAAAAA	719	False	NA	NA	False	NA	NA	NA	8838549	8866773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.36	chr4	+	4966	21	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	65	6	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	12.7447047827716	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAGTCCAAGTCAT	8	True	NA	NA	False	NA	NA	NA	8840386	8866816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.38	chr4	+	6139	18	NNC	ENSMUSG00000041235.13	novel	9444	38	NA	NA	4184	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.0392613708548	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGGAAA	1469	False	NA	NA	False	NA	NA	NA	8844505	8866802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8844713_8847078_8847279_8847456_8849264_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.39	chr4	+	3808	14	NIC	ENSMUSG00000041235.13	novel	9444	38	NA	NA	-3979	-37	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	12.9111666727709	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAGAAGAGAAAAAA	8215	False	NA	NA	False	NA	NA	NA	8851251	8866773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.4	chr4	+	5724	31	NIC	ENSMUSG00000041235.13	novel	741	4	NA	NA	10	-1679	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.4355982212054	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTACAGAATTTT	-11	True	NA	NA	False	AGTAAA	-14	NA	8690415	8856939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673
ES.22896.40	chr4	+	4338	8	NNC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-1043	7	intron_retention	FALSE	canonical	0	0	junction_5	35.8466119994168	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGTCCAAGTCATG	NA	False	NA	NA	False	NA	NA	NA	8854187	8866817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8854294_8854524_8854734_8854845_8856832_8858478_8858707_8859042_8859487_8862567_8862712_8863908_8864050_8865737
ES.22896.41	chr4	+	2737	8	NIC	ENSMUSG00000041235.13	novel	9444	38	NA	NA	-674	-36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.3301560719186	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAGAGAAAAAAA	355	False	NA	NA	False	NA	NA	NA	8854556	8866774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.42	chr4	+	4937	9	NNC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	-529	1094	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.3920653528411	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTGTTTACTGGAAA	500	False	NA	NA	False	AATAAA	-26	NA	8854701	8868753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862567_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.43	chr4	+	4462	8	NIC	ENSMUSG00000041235.13	novel	10216	38	NA	NA	140	1098	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	9.84782167977948	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTACTGGAAAGTTC	1169	False	NA	NA	False	AATAAA	-30	NA	8855370	8868757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.5	chr4	+	10495	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	42	junction_5	13.3684101547544	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTAGTTATAGAATGCA	-9	True	NA	10	True	AATAAA	-20	NA	8690417	8867653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.6	chr4	+	4926	2	FSM	ENSMUSG00000041235.13	ENSMUST00000170457.2	4953	2	29	-2	29	2	multi-exon	FALSE	canonical	3	49	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	8	True	NA	NA	False	NA	NA	NA	8690434	8755908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_8690776_8751323
ES.22896.7	chr4	+	10177	36	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	29	-8	intron_retention	FALSE	canonical	3	42	junction_5	13.6008403101741	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGGAAA	8	True	NA	NA	False	NA	NA	NA	8690434	8866802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.8	chr4	+	9875	38	NNC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	-31	-174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.6241123348998	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGTTATATATTTAAT	12	True	NA	NA	False	NA	NA	NA	8690438	8867050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805290_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22896.9	chr4	+	7770	37	NIC	ENSMUSG00000041235.13	novel	741	4	NA	NA	-31	-36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.0365212281016	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAGAGAAAAAAA	12	True	NA	NA	False	NA	NA	NA	8690438	8866774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_8690776_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ES.22897.1	chr4	-	4341	2	Antisense	novelGene_ENSMUSG00000041235.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTCTGCATTCTCTAATT	NA	False	NA	NA	False	NA	NA	NA	8762116	8757409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_8758889_8759254
ES.22898.1	chr4	-	4892	2	Antisense	novelGene_ENSMUSG00000041235.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCTAAACACTCGGCA	NA	False	NA	NA	False	AGTAAA	-44	NA	8793041	8787635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_8788864_8789377
ES.22899.1	chr4	-	5369	1	Antisense	novelGene_ENSMUSG00000041235.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACTACACTGAAAATCC	NA	False	NA	NA	False	NA	NA	NA	8847724	8842355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_8842400_8847700
ES.229.1	chr1	+	132	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	33854522	33854654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33854500_33854700
ES.2290.1	chr10	+	175	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	7525534	7525709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7525500_7525700
ES.22900.1	chr4	+	2520	1	Intergenic	novelGene_18802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	8954932	8957452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_8954900_8957500
ES.22901.1	chr4	-	173	1	Intergenic	novelGene_18803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	9194972	9194799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_9194800_9195000
ES.22902.1	chr4	+	584	1	Intergenic	novelGene_18804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	9525668	9526252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_9525700_9526300
ES.22903.1	chr4	+	459	1	Intergenic	novelGene_18806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9650877	9651336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_9650900_9651300
ES.22904.1	chr4	-	6628	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	25	-7	25	7	multi-exon	TRUE	canonical	0	0	junction_20	115.972932507461	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTTGTGTATG	NA	False	NA	NA	False	AATAAA	-37	NA	9669137	9449071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.10	chr4	-	6555	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.96699054507	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	10	True	NA	NA	False	AATAAA	-30	NA	9669080	9449078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508708_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.103	chr4	-	2466	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	67	303	-9	-303	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAGAACACTACTTT	-5	True	NA	NA	False	ATTAAA	-15	NA	9669095	9575569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.104	chr4	-	4178	1	NIC	ENSMUSG00000028207.19	novel	2652	14	NA	NA	13490	103	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAGAGTCTGGAGAGC	NA	False	NA	NA	False	ATTAAA	-18	NA	9625770	9621592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9621600_9625800
ES.22904.105	chr4	-	1228	5	NNC	ENSMUSG00000028207.19	novel	1174	5	NA	NA	3	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.452184509266	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAATGACCTGTTTTTA	7	True	NA	NA	False	AATGAA	-15	NA	9669083	9621677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9622227_9629303_9629461_9635900_9635970_9639197_9639348_9668780
ES.22904.106	chr4	-	2819	4	FSM	ENSMUSG00000028207.19	ENSMUST00000098275.9	1007	4	79	-1891	3	367	multi-exon	FALSE	canonical	0	0	junction_1	212.653604614536	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTCTAAAGCAAATGTA	7	True	NA	NA	False	AATAAA	-15	NA	9669083	9628655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9630953_9635900_9635970_9639197_9639348_9668780
ES.22904.107	chr4	-	4477	2	NNC	ENSMUSG00000028207.19	novel	1007	4	NA	NA	3284	362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGGTCTAAAGCAA	7700	False	NA	NA	False	AATAAA	-10	NA	9635976	9628660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9633062_9635900
ES.22904.108	chr4	-	2494	5	NNC	ENSMUSG00000028207.19	novel	2576	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.705362641838	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTTTTCAAAGCAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	9669352	9629022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9630953_9635900_9635970_9639197_9639348_9668780_9668929_9669155
ES.22904.109	chr4	-	1035	5	NNC	ENSMUSG00000028207.19	novel	2576	5	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.343455096492	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACGGTTTTCAAAGCAG	-1	False	NA	NA	False	AATAAA	-22	NA	9669115	9629024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9629461_9635900_9635970_9637658_9637704_9639197_9639348_9668780
ES.22904.11	chr4	-	6499	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	110.676665395369	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	9669138	9449078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.110	chr4	-	1571	4	FSM	ENSMUSG00000028207.19	ENSMUST00000098275.9	1007	4	60	-624	-16	624	multi-exon	FALSE	canonical	0	0	junction_1	212.653604614536	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGCTTTTCCATTTTT	-12	True	NA	NA	False	ATTAAA	-14	NA	9669102	9629922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9630953_9635900_9635970_9639197_9639348_9668780
ES.22904.111	chr4	-	3658	4	NNC	ENSMUSG00000028207.19	novel	1007	4	NA	NA	6	624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.653604614536	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGCTTTTCCATTTTT	10	True	NA	NA	False	ATTAAA	-14	NA	9669080	9629922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9633062_9635900_9635970_9639197_9639348_9668780
ES.22904.112	chr4	-	5538	3	NNC	ENSMUSG00000028207.19	novel	3187	3	NA	NA	540	31	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCCACATACTGTCAG	4956	False	NA	NA	False	AAAAAG	-10	NA	9638720	9633084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9633595_9633633_9636394_9636452
ES.22904.13	chr4	-	6507	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	109.131999837031	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACTGAATGTTTTG	13	True	NA	NA	False	AATAAA	-24	NA	9669077	9449084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9635900_9635970_9639197_9639348_9668780
ES.22904.14	chr4	-	6324	20	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	116.590625528894	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACTGAATGTTTTG	4	True	NA	NA	False	AATAAA	-24	NA	9669086	9449084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9639197_9639348_9668780
ES.22904.15	chr4	-	6448	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	131.111781773142	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACTGAATGTTTTG	6	True	NA	NA	False	AATAAA	-24	NA	9669084	9449084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.17	chr4	-	4066	27	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.279303919492	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACTGAATGTTTTG	-2	True	NA	NA	False	AATAAA	-24	NA	9669092	9449084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9449644_9451855_9452101_9452323_9452494_9452610_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.18	chr4	-	6820	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	121.916289302218	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAACACTGAATGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	9669116	9449086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9630772_9630953_9635900_9635970_9639197_9639348_9668780
ES.22904.19	chr4	-	5885	22	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-10	-576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.676665395369	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTCTCAGATCTTTGTC	-6	True	NA	NA	False	CATAAA	-23	NA	9669096	9449654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635896_9635970_9639197_9639348_9668780
ES.22904.2	chr4	-	6481	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.796758169349	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTTGTGTTTTGTG	-5	True	NA	NA	False	AATAAA	-33	NA	9669095	9449075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9452049_9452149_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.20	chr4	-	5838	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	47	809	-29	-809	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTATTTATTTCGG	-1	False	NA	NA	False	ATTAAA	-27	NA	9669115	9449887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.21	chr4	-	5770	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	67	809	-9	-809	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTTATTTATTTCGG	-5	True	NA	NA	False	ATTAAA	-27	NA	9669095	9449887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.23	chr4	-	5052	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	45	1597	-31	-1597	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTCTGGTCATATTAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	9669117	9450675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.24	chr4	-	4822	21	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-20	-1599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.694092102345	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCACTCTGGTCATATTA	8	False	9669114	NA	False	ATTAAA	-11	NA	9669106	9450677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604628_9635896_9635970_9639197_9639348_9668780
ES.22904.25	chr4	-	4711	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	45	1938	-31	-1938	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATACATCTAGTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	9669117	9451016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.26	chr4	-	4587	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-10	-1942	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	123.800567763288	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGTATACATCTAGTT	-6	True	NA	NA	False	AATAAA	-14	NA	9669096	9451020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.27	chr4	-	4625	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	78	1943	2	-1943	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAGTATACATCTAGT	6	True	NA	NA	False	AATAAA	-13	NA	9669084	9451021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.28	chr4	-	4177	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	-2205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.048440517505	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	7	True	NA	1	True	AATAAA	-22	NA	9669083	9451283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9452575_9452615_9452722_9452844_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9639197_9639348_9668780
ES.22904.29	chr4	-	4422	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	19	2205	19	-2205	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	1	True	AATAAA	-22	NA	9669143	9451283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.3	chr4	-	6651	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	45	-2	-31	2	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTTTTGTGTTTTGT	NA	False	NA	NA	False	AATAAA	-32	NA	9669117	9449076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.31	chr4	-	4460	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	29	2205	29	-2205	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	1	True	AATAAA	-22	NA	9669133	9451283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.32	chr4	-	4368	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-30	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	122.196055718087	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	1	True	AATAAA	-22	NA	9669116	9451283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.34	chr4	-	4488	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-8	-2207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	121.192234305481	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	-4	True	NA	-1	True	AATAAA	-20	NA	9669094	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9636039_9639197_9639348_9668780
ES.22904.35	chr4	-	4213	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	15	-2207	combination_of_known_splicesites	FALSE	canonical	1	4	junction_18	119.537392512204	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	19	True	NA	-1	True	AATAAA	-20	NA	9669071	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9639197_9639348_9668780
ES.22904.36	chr4	-	4413	23	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	24	-2207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.567355404996	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	NA	False	NA	-1	True	AATAAA	-20	NA	9669138	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484612_9508632_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.37	chr4	-	4620	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-29	-2207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	121.916289302218	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	-1	False	NA	-1	True	AATAAA	-20	NA	9669115	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9630772_9630953_9635900_9635970_9639197_9639348_9668780
ES.22904.38	chr4	-	4430	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	2	-2207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	137.989177954339	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	6	True	NA	-1	True	AATAAA	-20	NA	9669084	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9596015_9596085_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.39	chr4	-	4328	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-31	-2207	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	124.607715028517	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	NA	False	NA	-1	True	AATAAA	-20	NA	9669117	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.4	chr4	-	6566	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-21	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	122.196055718087	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTTTTGTGTTTTGT	7	False	9669114	NA	False	AATAAA	-32	NA	9669107	9449076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.40	chr4	-	4374	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-20	-2207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.96699054507	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	8	False	9669114	-1	True	AATAAA	-20	NA	9669106	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508708_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.41	chr4	-	4050	20	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-29	-2207	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	104.367930035738	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	-1	False	NA	-1	True	AATAAA	-20	NA	9669115	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9668780
ES.22904.42	chr4	-	4427	23	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-30	-2207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	125.36792958566	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	NA	False	NA	-1	True	AATAAA	-20	NA	9669116	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598713_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.43	chr4	-	4318	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-30	-2207	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	128.779743058535	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCCTCGCTCTTACT	NA	False	NA	-1	True	AATAAA	-20	NA	9669116	9451285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.44	chr4	-	4401	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	-2208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	140.714608815913	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCCTCGCTCTTAC	7	True	NA	-2	True	AATAAA	-19	NA	9669083	9451286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9596015_9596085_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.49	chr4	-	4410	23	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-29	-2209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	134.353179566038	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTTCCTCGCTCTTA	-1	False	NA	-3	True	AATAAA	-18	NA	9669115	9451287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537771_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.5	chr4	-	6507	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	123.800567763288	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	16	True	NA	NA	False	AATAAA	-30	NA	9669074	9449078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.50	chr4	-	4271	24	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-2	-2209	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	119.498764141643	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTTCCTCGCTCTTA	NA	False	NA	-3	True	AATAAA	-18	NA	9669323	9451287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9669155
ES.22904.51	chr4	-	4234	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	-2210	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	110.676665395369	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTTTTCCTCGCTCTT	7	True	NA	-4	True	AATAAA	-17	NA	9669083	9451288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.52	chr4	-	4082	21	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-10	-2210	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	137.300436998576	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTTTTCCTCGCTCTT	-6	True	NA	-4	True	AATAAA	-17	NA	9669096	9451288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.53	chr4	-	4471	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	-2210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	134.835403404826	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTTTTCCTCGCTCTT	7	True	NA	-4	True	AATAAA	-17	NA	9669083	9451288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9630772_9630953_9635900_9635970_9639197_9639348_9668780
ES.22904.54	chr4	-	4474	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	2	-2211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	132.636663012155	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	6	True	NA	-5	True	AATAAA	-16	NA	9669084	9451289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9596015_9596085_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.55	chr4	-	4307	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	1	-2211	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	123.800567763288	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	5	True	NA	-5	True	AATAAA	-16	NA	9669085	9451289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.56	chr4	-	4318	23	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	28	-2211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	136.77203238592	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	56	False	NA	-5	True	AATAAA	-16	NA	9669058	9451289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594694_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607864_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.57	chr4	-	8895	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-29	-2211	intron_retention	FALSE	canonical	0	0	junction_20	109.09084280301	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	-1	False	NA	-5	True	AATAAA	-16	NA	9669115	9451289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.58	chr4	-	5799	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-16	-2211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	122.618084746885	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAATTTTTCCTCGCTCT	-12	True	NA	-5	True	AATAAA	-16	NA	9669102	9451289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9596460_9597936_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.59	chr4	-	4216	21	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-29	-2212	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	118.694092102345	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	-1	False	NA	-6	True	AATAAA	-15	NA	9669115	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.6	chr4	-	6615	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	120.286158490433	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	-5	True	NA	NA	False	AATAAA	-30	NA	9669095	9449078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594687_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.60	chr4	-	4260	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-16	-2212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	131.111781773142	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	-12	True	NA	-6	True	AATAAA	-15	NA	9669102	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.61	chr4	-	2911	8	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	2	-2212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.9154608809597	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	6	True	NA	-6	True	AATAAA	-15	NA	9669084	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517663_9668945
ES.22904.62	chr4	-	7010	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	201	-2212	intron_retention	FALSE	canonical	0	0	junction_19	116.235764007758	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	229	False	NA	-6	True	AATAAA	-15	NA	9668885	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.63	chr4	-	4405	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-6	-2212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	121.192234305481	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	-2	True	NA	-6	True	AATAAA	-15	NA	9669092	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639204_9639348_9668780
ES.22904.64	chr4	-	4334	22	NNC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	16	-2212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	128.108053881822	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	20	True	NA	-6	True	AATAAA	-15	NA	9669070	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9601281_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.65	chr4	-	4149	21	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-28	-2212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	111.774091362891	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	0	True	NA	-6	True	AATAAA	-15	NA	9669114	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9635900_9635970_9639197_9639348_9668780
ES.22904.66	chr4	-	4440	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-31	-2212	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	121.192234305481	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATTTTTCCTCGCTC	NA	False	NA	-6	True	AATAAA	-15	NA	9669117	9451290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635961_9639185_9639348_9668780
ES.22904.67	chr4	-	4288	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	-31	-2214	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	131.354344118574	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTAATTTTTCCTCGC	NA	False	NA	-8	True	AATAAA	-13	NA	9669117	9451292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.68	chr4	-	4168	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	70	2408	-6	-2408	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCTGTTAACTTAGTAAA	-2	True	NA	NA	False	AATAAA	-21	NA	9669092	9451486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.69	chr4	-	4033	25	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	15	-2408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.450496317476	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCTGTTAACTTAGTAAA	19	True	NA	NA	False	AATAAA	-21	NA	9669071	9451486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9452150_9452213_9452263_9452312_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.70	chr4	-	3105	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	63	3526	-13	-3526	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTAAGAGCAACATT	-9	True	NA	NA	False	NA	NA	NA	9669099	9452604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.71	chr4	-	2831	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	15	-3601	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	110.676665395369	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGGGTCTACCTGTGT	19	True	NA	NA	False	CATAAA	-41	NA	9669071	9452679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.72	chr4	-	2995	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	45	3606	-31	-3606	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCCTTGGGTCTACC	NA	False	NA	NA	False	CATAAA	-36	NA	9669117	9452684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.73	chr4	-	2940	24	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	6	-3672	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	108.084473020543	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGAACTTTGTTTT	10	True	NA	NA	False	AAGAAA	-14	NA	9669080	9452750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610935_9635896_9635970_9639197_9639348_9668780
ES.22904.75	chr4	-	2744	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	90	3860	14	-3860	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTAGTTTGTAATTTT	18	True	NA	NA	False	AATGAA	-1	NA	9669072	9452938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.76	chr4	-	2119	20	NNC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-30	-26153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	133.094888359693	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTGAAGGTCGAAAAT	NA	False	NA	NA	False	AATGAA	-25	NA	9669116	9475231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9475482_9484471_9484608_9508626_9508765_9514603_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.77	chr4	-	6866	1	Intergenic	novelGene_18805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCACTCACACCTCTACC	NA	False	NA	NA	False	NA	NA	NA	9555395	9548529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_9548500_9555400
ES.22904.78	chr4	-	4090	14	NNC	ENSMUSG00000028207.19	novel	557	6	NA	NA	-31	15612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.761686427951	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTTAAAGTATCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	9669117	9559259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9562218_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.79	chr4	-	4440	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	48	-1604	-28	1209	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGACTCTGAAGTTGA	0	True	NA	NA	False	AATAAA	-14	NA	9669114	9573662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.80	chr4	-	4415	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	24	-1603	24	1208	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGACTCTGAAGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	9669138	9573663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.82	chr4	-	2813	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	27	-4	27	4	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	NA	False	NA	0	True	AATAAA	-21	NA	9669135	9575262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.83	chr4	-	2837	15	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	150.337935658167	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	NA	False	NA	0	True	AATAAA	-21	NA	9669338	9575262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780_9668929_9669155
ES.22904.84	chr4	-	2815	14	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	179.773098276425	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCATTATTTTGAAC	-2	True	NA	0	True	AATAAA	-21	NA	9669092	9575262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9637658_9637704_9639197_9639348_9668780
ES.22904.85	chr4	-	5693	13	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-29	3	intron_retention	FALSE	canonical	0	0	junction_10	128.955068617803	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTGTCATTATTTTGAA	-1	False	NA	-1	True	AATAAA	-20	NA	9669115	9575263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.86	chr4	-	2759	13	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-17	3	combination_of_known_splicesites	FALSE	canonical	1	34	junction_11	119.930622305843	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTGTCATTATTTTGAA	11	False	9669114	-1	True	AATAAA	-20	NA	9669103	9575263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9639197_9639348_9668780
ES.22904.87	chr4	-	2725	13	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-29	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	160.719800169944	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTGTCATTATTTTGA	-1	False	NA	-2	True	AATAAA	-19	NA	9669115	9575264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.88	chr4	-	2669	12	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-31	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	135.171822091748	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTGTCATTATTTTG	NA	False	NA	-3	True	AATAAA	-18	NA	9669117	9575265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
ES.22904.9	chr4	-	6501	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	124.607715028517	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	7	True	NA	NA	False	AATAAA	-30	NA	9669083	9449078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.90	chr4	-	2754	13	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-20	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	156.936005181164	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTGTCATTATTTTG	8	False	9669114	-3	True	AATAAA	-18	NA	9669106	9575265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.91	chr4	-	2744	13	NNC	ENSMUSG00000028207.19	novel	2836	13	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	162.571245065732	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTGTCATTATTTTG	9	True	NA	-3	True	AATAAA	-18	NA	9669081	9575265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598290_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.92	chr4	-	2913	15	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	164.974286802891	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	False	NA	-4	True	AATAAA	-17	NA	9669117	9575266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576974_9580219_9580294_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.96	chr4	-	2705	13	NNC	ENSMUSG00000028207.19	novel	2836	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.795837064451	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	13	True	NA	-4	True	AATAAA	-17	NA	9669077	9575266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576926_9583807_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639346_9668780
ES.22904.97	chr4	-	2643	12	NIC	ENSMUSG00000028207.19	novel	2836	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	175.917242000487	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	7	True	NA	-4	True	AATAAA	-17	NA	9669083	9575266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.98	chr4	-	2904	15	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	169.770793863313	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	1	True	NA	-4	True	AATAAA	-17	NA	9669113	9575266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9596015_9596085_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22904.99	chr4	-	2969	15	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.728035454873	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGATTGTCATTATTT	-2	True	NA	-5	True	AATAAA	-16	NA	9669092	9575267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_9576974_9580137_9580294_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ES.22905.1	chr4	+	173	1	Intergenic	novelGene_18807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	9671879	9672052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_9671900_9672100
ES.22906.1	chr4	+	2273	5	NNC	ENSMUSG00000085558.8	novel	509	3	NA	NA	-62671	616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAACATTACTCAATTG	NA	False	NA	NA	False	AATAAA	-15	NA	9707913	9781323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_9708013_9751221_9751304_9776036_9776198_9779274_9781094_9781211
ES.22906.2	chr4	+	3719	1	Intergenic	novelGene_18808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATAATGCCTTGTCAC	NA	False	NA	NA	False	AATAAA	-22	NA	9750790	9754509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_9750800_9754500
ES.22907.1	chr4	-	184	1	Intergenic	novelGene_18809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGCAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	9778547	9778363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_9778400_9778500
ES.22908.1	chr4	-	173	1	Intergenic	novelGene_18810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAACAAACG	NA	False	NA	NA	False	NA	NA	NA	9817696	9817523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_9817500_9817700
ES.22909.1	chr4	-	182	1	Intergenic	novelGene_18811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATAGGAAA	NA	False	NA	NA	False	NA	NA	NA	10484068	10483886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_10483900_10484100
ES.2291.1	chr10	+	179	1	Antisense	novelGene_ENSMUSG00000019795.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	7527233	7527412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_7527200_7527400
ES.22910.1	chr4	+	269	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	405	-38	405	38	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	425	False	NA	NA	False	AATAAA	-14	NA	10848824	10849093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_10848800_10849100
ES.22911.1	chr4	+	2127	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	-10	-1	-10	1	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTCTGTGCAAT	NA	False	NA	12	True	AATAAA	-16	NA	10874487	10899422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ES.22911.2	chr4	+	2011	6	NIC	ENSMUSG00000059482.16	novel	2116	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	50.5885362508148	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	7	True	NA	11	True	AATAAA	-15	NA	10874523	10899421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_10874694_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ES.22911.3	chr4	+	2428	6	NNC	ENSMUSG00000059482.16	novel	2116	6	NA	NA	13	2055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.3485050392373	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAGGAAAGCAGTAGTAA	8	True	NA	NA	False	NA	NA	NA	10874580	10895524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10893606
ES.22911.4	chr4	+	1924	5	NIC	ENSMUSG00000059482.16	novel	2116	6	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57.9326117139561	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	29	True	NA	11	True	AATAAA	-15	NA	10874601	10899421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_10874773_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ES.22911.5	chr4	+	3187	1	NIC	ENSMUSG00000059482.16	novel	2116	6	NA	NA	-600	-9653	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTCTGTTATATGCT	1601	False	NA	NA	False	AATAAA	-23	NA	10878938	10882125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_10878900_10882100
ES.22911.6	chr4	+	3718	1	Intergenic	novelGene_18812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAACAAAAACAGAATAAG	5139	False	NA	NA	False	NA	NA	NA	10882476	10886194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_10882500_10886200
ES.22912.1	chr4	-	3476	4	Antisense	novelGene_ENSMUSG00000059482.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTAGTGTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	10898304	10877308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_10879611_10881800_10882471_10893260_10893357_10897896
ES.22912.2	chr4	-	5982	2	Antisense	novelGene_ENSMUSG00000059482.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10885509	10877337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_10879611_10881800
ES.22912.3	chr4	-	3228	3	Antisense	novelGene_ENSMUSG00000059482.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGTTCTGTTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	10889899	10885584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_10887946_10888369_10889021_10889683
ES.22912.4	chr4	-	3651	2	Antisense	novelGene_ENSMUSG00000059482.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGCGTTCTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	10889901	10885587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_10889021_10889683
ES.22913.1	chr4	+	205	1	Intergenic	novelGene_18813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAAAGGTCCTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	10909295	10909500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_10909300_10909500
ES.22914.1	chr4	+	1867	1	Intergenic	novelGene_18817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAATTATTTA	NA	False	NA	NA	False	NA	NA	NA	11036519	11038386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11036500_11038400
ES.22915.1	chr4	-	1303	4	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	65	34932	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATGTTCTCCAGTGT	-24	True	NA	NA	False	NA	NA	NA	11007611	10953729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10954625_10960427_10960568_10965656_10965706_11007392
ES.22915.10	chr4	-	3174	2	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	-18425	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGTGTTTTTATATT	NA	False	NA	-2	True	AATAAA	-16	NA	11026352	10988662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10991355_11025870
ES.22915.12	chr4	-	2926	2	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGTGTTTTTATATT	15	False	11007645	-2	True	AATAAA	-16	NA	11007630	10988662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10991347_11007388
ES.22915.14	chr4	-	2387	3	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	99	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	422	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTCCTGTGTTTTTA	10	True	NA	-6	True	AATAAA	-12	NA	11007577	10988666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10990757_10991242_10991355_11007392
ES.22915.15	chr4	-	2193	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	98	686	98	-686	multi-exon	FALSE	canonical	3	844	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGACCATTGTCCGA	9	True	NA	NA	False	AATATA	-29	NA	11007578	10989347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007392
ES.22915.16	chr4	-	1519	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	25	1433	25	654	multi-exon	FALSE	canonical	3	844	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGATTGATTTA	-6	True	NA	-3	True	AATAAA	-17	NA	11007651	10990094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007392
ES.22915.17	chr4	-	1239	2	Intergenic	novelGene_18814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAACAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	11015597	11010484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11011072_11014945
ES.22915.18	chr4	-	174	2	Intergenic	novelGene_18815	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	11046161	11013613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11013665_11046038
ES.22915.19	chr4	-	178	1	Intergenic	novelGene_18816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGTC	NA	False	NA	NA	False	NA	NA	NA	11015891	11015713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11015700_11015900
ES.22915.2	chr4	-	3546	6	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	99	26493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTGTGTCTTATTGCTG	10	True	NA	NA	False	AATAAA	-19	NA	11007577	10962168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10965033_10965656_10965706_10966694_10966763_10972962_10973254_10973414_10973504_11007392
ES.22915.20	chr4	-	358	1	Intergenic	novelGene_18818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1522	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGATTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	11046161	11045803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11045800_11046200
ES.22915.21	chr4	-	214	1	Intergenic	novelGene_18819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1522	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTGATGACCAAAGT	NA	False	NA	1	True	NA	NA	NA	11046163	11045949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11045900_11046200
ES.22915.3	chr4	-	2943	3	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	55	13593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGCCTGTTGTAATTC	24	False	11007645	NA	False	NA	NA	NA	11007621	10975068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10975094_10988665_10991355_11007392
ES.22915.4	chr4	-	2419	4	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	93	13593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	397.865415547631	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGCCTGTTGTAATTC	4	True	NA	NA	False	NA	NA	NA	11007583	10975068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10975094_10988665_10989624_10990109_10991355_11007392
ES.22915.5	chr4	-	4534	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	29	-1586	29	1586	multi-exon	FALSE	canonical	3	844	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTGTGTGTG	-2	True	NA	NA	False	AATAAA	-22	NA	11007647	10987075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007392
ES.22915.6	chr4	-	4023	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	89	-1135	89	1135	multi-exon	FALSE	canonical	3	844	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGCATGAGCCTGC	0	True	NA	NA	False	AATAAA	-17	NA	11007587	10987526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007392
ES.22915.7	chr4	-	3199	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	-222	0	29	0	multi-exon	FALSE	canonical	3	844	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	False	NA	-1	True	AATAAA	-17	NA	11007898	10988661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007392
ES.22915.8	chr4	-	3761	3	NNC	ENSMUSG00000049969.4	novel	2977	2	NA	NA	-7681	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGTGTTTTTATATT	NA	False	NA	-2	True	AATAAA	-16	NA	11015608	10988662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_10991355_11010665_11011072_11014945
ES.22915.9	chr4	-	2904	2	FSM	ENSMUSG00000049969.4	ENSMUST00000137891.2	668	2	-150	-2086	-150	-1	multi-exon	FALSE	canonical	1	11	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGTGTTTTTATATT	NA	False	NA	-2	True	AATAAA	-16	NA	11008077	10988662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_10991355_11007865
ES.22916.1	chr4	+	195	1	Intergenic	novelGene_18820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	11066110	11066305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11066100_11066300
ES.22917.1	chr4	-	5538	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	2	3	intron_retention	TRUE	canonical	3	57	junction_6	109.202863085738	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-17	True	NA	0	True	TTTAAA	-6	NA	11076202	11051041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11066708_11070199_11070323_11073186_11073244_11075979
ES.22917.10	chr4	-	1125	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.669681280396	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-2	True	NA	-8	True	NA	NA	NA	11076187	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11051998_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ES.22917.11	chr4	-	1460	11	NNC	ENSMUSG00000050323.15	novel	863	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170.06084205366	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-7	True	NA	-8	True	NA	NA	NA	11076192	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11056973_11057123_11057176_11057296_11059011_11059114_11060860_11060995_11062049_11062153_11066527_11066708_11070199_11070323_11073139_11073244_11075979
ES.22917.13	chr4	-	962	7	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	177.412576279762	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-18	True	NA	-8	True	NA	NA	NA	11076203	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11051226_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
ES.22917.14	chr4	-	1152	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	157.20545650694	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTGTGGTCTG	3	True	NA	-9	True	NA	NA	NA	11076182	11051050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11068055_11068197_11070199_11070323_11073186_11073244_11075979
ES.22917.16	chr4	-	4542	11	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.187622079617	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTACTTTTAGTTTATT	-3	True	NA	-33	True	AAAAAG	-30	NA	11076188	11051074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11051998_11052064_11053431_11053953_11055937_11057123_11057176_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073186_11073244_11075979
ES.22917.17	chr4	-	4081	10	NNC	ENSMUSG00000050323.15	novel	863	9	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	155.926225037102	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATTTACTTTTAGTTT	-18	True	NA	-36	True	AAAAAG	-27	NA	11076203	11051077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11055928_11057123_11057176_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139_11073244_11075979
ES.22917.18	chr4	-	1102	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	157.534319208213	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATTTACTTTTAGTT	3	True	NA	-37	True	AAAAAG	-26	NA	11076182	11051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11068055_11068175_11070199_11070323_11073186_11073244_11075979
ES.22917.19	chr4	-	1785	8	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	153.326382569461	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATTTACTTTTAGTT	-18	True	NA	-37	True	AAAAAG	-26	NA	11076203	11051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11052064_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073186_11073244_11075979
ES.22917.2	chr4	-	4415	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.901472804376	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	NA	False	NA	0	True	TTTAAA	-6	NA	11076216	11051041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11054038_11057357_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ES.22917.20	chr4	-	1004	9	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-29	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	102.543588292979	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATTTACTTTTAGTT	-18	True	NA	-37	True	AAAAAG	-26	NA	11076203	11051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073186_11073244_11075979
ES.22917.21	chr4	-	7800	8	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	-4	-29	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	180.151410242176	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGATTTACTTTTAGTT	-7	True	NA	-37	True	AAAAAG	-26	NA	11076192	11051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051768_11052585_11054219_11054308_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
ES.22917.23	chr4	-	5555	9	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	-44	intron_retention	FALSE	non_canonical	0	0	junction_2	162.65300489078	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTGCTCATACT	-2	True	NA	-52	True	AAAAAG	-11	NA	11076187	11051093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053953_11055937_11057123_11057176_11059114_11060860_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ES.22917.24	chr4	-	6448	2	FSM	ENSMUSG00000050323.15	ENSMUST00000141019.2	461	2	-10	-5977	6	3239	multi-exon	FALSE	canonical	3	372	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	-13	True	NA	NA	False	NA	NA	NA	11076198	11067014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11073244_11075979
ES.22917.25	chr4	-	6074	2	FSM	ENSMUSG00000050323.15	ENSMUST00000141019.2	461	2	-4	-5609	-4	2871	multi-exon	FALSE	canonical	3	372	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTACTCCCCAACCC	-7	True	NA	NA	False	NA	NA	NA	11076192	11067382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11073244_11075979
ES.22917.3	chr4	-	4525	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	1	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	153.120947918167	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTCTGAGTTTTTTT	-18	True	NA	0	True	TTTAAA	-6	NA	11076203	11051041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053953_11055937_11057123_11057176_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073186_11073244_11075979
ES.22917.4	chr4	-	1077	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_7	119.468549731718	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-19	True	NA	-8	True	NA	NA	NA	11076204	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ES.22917.5	chr4	-	1043	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	146.340531024075	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	NA	False	NA	-8	True	NA	NA	NA	11076227	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
ES.22917.6	chr4	-	1267	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.00586409007	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-10	True	NA	-8	True	NA	NA	NA	11076195	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11055928_11056128_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ES.22917.8	chr4	-	1235	10	NNC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	165.307868409295	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-23	True	NA	-8	True	NA	NA	NA	11076208	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11068055_11068210_11070199_11070323_11073143_11073244_11075979
ES.22917.9	chr4	-	4322	8	NNC	ENSMUSG00000050323.15	novel	863	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	151.259339397943	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-13	True	NA	-8	True	NA	NA	NA	11076198	11051049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11051226_11053431_11053953_11055937_11057123_11057176_11059114_11066650_11066708_11070199_11070323_11073139_11073244_11075979
ES.22918.1	chr4	-	136	1	Intergenic	novelGene_18821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAGAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	11076904	11076768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11076800_11076900
ES.22919.1	chr4	-	180	1	Intergenic	novelGene_18822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACAGT	NA	False	NA	NA	False	NA	NA	NA	11084685	11084505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11084500_11084700
ES.2292.1	chr10	+	1876	1	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	7529723	7531599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_7529700_7531600
ES.22920.1	chr4	+	219	1	Intergenic	novelGene_18823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATACA	9059	False	NA	NA	False	NA	NA	NA	11114455	11114674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11114500_11114700
ES.22921.1	chr4	+	210	1	Intergenic	novelGene_18824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTTTTATGTAGTCGA	NA	False	NA	NA	False	NA	NA	NA	11121836	11122046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11121800_11122000
ES.22922.1	chr4	-	239	1	Intergenic	novelGene_18825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCGTAAGAATCGCTACA	9886	False	NA	NA	False	AAGAAA	-40	NA	11146364	11146125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11146100_11146400
ES.22923.1	chr4	+	6758	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	-504	-850	-504	850	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTGTGTGTGTGTTG	733	False	NA	NA	False	AATAAA	-34	NA	11155926	11175229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.10	chr4	+	1115	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-6	4323	4	2042	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAATCGCCTAGTGTA	2	True	NA	11	True	AATGAA	-26	NA	11156434	11170056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
ES.22923.11	chr4	+	5586	6	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	106.486431060488	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTGGAGGATTCTTT	5	True	NA	13	True	AATAAA	-14	NA	11156437	11174376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165089_11165448_11165987_11166142_11167896_11167935_11169709
ES.22923.12	chr4	+	5487	6	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	106.280007527286	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATGTGGAGGATTCTT	6	True	NA	12	True	AATAAA	-13	NA	11156438	11174375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165089_11165448_11166084_11166142_11167896_11167935_11169709
ES.22923.13	chr4	+	6271	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-2	-837	-2	837	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTATGCATCTTT	6	True	NA	NA	False	AATAAA	-21	NA	11156438	11175216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
ES.22923.14	chr4	+	5951	4	NIC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	82	junction_3	81.1185689113302	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	9	True	NA	16	True	AATAAA	-17	NA	11156441	11174379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11156548_11164310_11165448_11167896_11167935_11169709
ES.22923.15	chr4	+	5445	5	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	118.518722149709	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	14	True	NA	16	True	AATAAA	-17	NA	11156446	11174379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165089_11165448_11166084_11166142_11169709
ES.22923.16	chr4	+	5403	4	NNC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.964544278321	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	14	True	NA	16	True	AATAAA	-17	NA	11156446	11174379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165074_11165448_11169709
ES.22923.17	chr4	+	8392	3	NIC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	3	-3	intron_retention	FALSE	canonical	3	82	junction_2	87.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTGGAGGATTCTTT	14	True	NA	13	True	AATAAA	-14	NA	11156446	11174376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11156548_11164310_11167935_11169709
ES.22923.18	chr4	+	3153	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	12	2267	9	-2267	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGACTTTTCATTTGCTTT	20	True	NA	NA	False	NA	NA	NA	11156452	11172112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
ES.22923.19	chr4	+	3821	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	36	1547	23	-1547	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGTATTTGTATGGT	34	False	NA	NA	False	NA	NA	NA	11156466	11172832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.2	chr4	+	5482	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	-73	-5	-73	5	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATTCTTTTATCTTCA	1164	False	NA	21	True	AATAAA	-22	NA	11156357	11174384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.20	chr4	+	5191	5	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	91.4836050885622	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGGAGGATTCTTTT	0	True	NA	14	True	AATAAA	-15	NA	11156475	11174377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165293_11165448_11167896_11167935_11169709
ES.22923.21	chr4	+	5984	4	NNC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	34	831	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	102.170880826627	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTTTCTATGTATGC	2	True	NA	NA	False	AATAAA	-15	NA	11156477	11175210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165293_11165448_11169709
ES.22923.22	chr4	+	3999	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	47	1358	34	-1358	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGAGGGTTCATA	2	True	NA	NA	False	AAAAAG	-12	NA	11156477	11173021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.23	chr4	+	5469	6	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.619700798692	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGGAGGATTCTTTT	3	True	NA	14	True	AATAAA	-15	NA	11156478	11174377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169148_11169226_11169709
ES.22923.24	chr4	+	3756	1	NIC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	1839	2039	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGACCAATCGCCTAGT	1025	False	NA	8	True	AATGAA	-23	NA	11166297	11170053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11166300_11170100
ES.22923.25	chr4	+	5220	1	NIC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	4701	0	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	3887	False	NA	16	True	AATAAA	-17	NA	11169159	11174379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11169200_11174400
ES.22923.3	chr4	+	5482	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	-48	-2	-38	2	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGGATTCTTTTATCT	1199	False	NA	18	True	AATAAA	-19	NA	11156392	11174381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
ES.22923.4	chr4	+	5416	4	NNC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.964544278321	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTGGAGGATTCTTT	1201	False	NA	13	True	AATAAA	-14	NA	11156394	11174376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165110_11165448_11169709
ES.22923.5	chr4	+	5297	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	-13	120	-13	-120	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGCATTGCTTAACCA	-15	True	NA	NA	False	AATGAA	-41	NA	11156417	11174259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.6	chr4	+	1646	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	-5	3763	-5	2602	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGATATGGTACAAATACTA	-7	True	NA	NA	False	AATATA	-24	NA	11156425	11170616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ES.22923.7	chr4	+	4290	5	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	-5	-1196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.756001937272	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTATCTTTATTCTTT	-7	True	NA	NA	False	AAAAAG	-5	NA	11156425	11173183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165089_11165448_11169148_11169226_11169709
ES.22923.8	chr4	+	7894	4	NIC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	82	junction_3	75.1576121671429	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	-5	True	NA	16	True	AATAAA	-17	NA	11156427	11174379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11156548_11164310_11164570_11165089_11167935_11169709
ES.22923.9	chr4	+	5194	4	NNC	ENSMUSG00000028211.12	novel	5404	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	102.170880826627	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGGAGGATTCTTTT	2	True	NA	14	True	AATAAA	-15	NA	11156434	11174377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11156548_11164310_11164570_11165293_11165448_11169709
ES.22924.1	chr4	-	1962	2	Intergenic	novelGene_18826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAATTTATGCCTACCC	NA	False	NA	NA	False	CATAAA	-14	NA	11156286	11151201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11152995_11156117
ES.22925.1	chr4	-	158	1	Intergenic	novelGene_18827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	11158162	11158004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11158000_11158200
ES.22926.1	chr4	-	197	1	Intergenic	novelGene_18828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAACCTAAATA	NA	False	NA	NA	False	NA	NA	NA	11160235	11160038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11160000_11160200
ES.22927.1	chr4	+	2783	12	NNC	ENSMUSG00000028212.17	novel	461	3	NA	NA	-778	-198	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	76.3764058587521	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGTAGA	NA	False	NA	26	True	AATAAA	-36	NA	11190572	11204477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11190739_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.10	chr4	+	2654	12	NNC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	47	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.3399313856578	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTCTTTTTCCTTCT	0	True	NA	43	True	AGTAAA	-18	NA	11191782	11204494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193034_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.11	chr4	+	3277	11	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	54	214	48	-207	intron_retention	FALSE	canonical	3	208	junction_1	29.149442533263	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAAGTTTTGCCATT	1	True	NA	17	True	AATAAA	-27	NA	11191783	11204468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189
ES.22927.13	chr4	+	2304	9	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	54	3833	48	-3826	5prime_fragment	FALSE	canonical	3	208	junction_1	32.1315654769574	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTAGTTTACTGCG	1	True	NA	NA	False	AATAAA	-18	NA	11191783	11200849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296
ES.22927.14	chr4	+	1903	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	54	951	48	-944	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGCCTTGCCATA	1	True	NA	NA	False	GATAAA	-43	NA	11191783	11203731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.15	chr4	+	3377	11	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	48	-243	intron_retention	FALSE	canonical	3	208	junction_1	29.0819531668697	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTGAAAAAA	1	True	NA	-19	True	TATAAA	-40	NA	11191783	11204432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11202348_11202984
ES.22927.16	chr4	+	3371	10	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	48	-243	intron_retention	FALSE	canonical	2	9	junction_8	80.8496547096317	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTGAAAAAA	1	True	NA	-19	True	TATAAA	-40	NA	11191783	11204432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11202189_11202348_11202984
ES.22927.17	chr4	+	3513	11	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	48	-213	intron_retention	FALSE	canonical	3	208	junction_1	28.306183070135	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTTAAAAGTAAAGTTTT	1	True	NA	11	True	AATAAA	-21	NA	11191783	11204462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.19	chr4	+	3094	12	NNC	ENSMUSG00000028212.17	novel	3006	12	NA	NA	48	156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.544781696517	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTCTGACCGAAA	1	True	NA	NA	False	NA	NA	NA	11191783	11204935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198727_11198825_11199296_11199432_11201304_11201417_11202189_11202313_11202960
ES.22927.2	chr4	+	4712	11	NIC	ENSMUSG00000028212.17	novel	3006	12	NA	NA	-773	-203	intron_retention	FALSE	canonical	3	47	junction_1	67.5985206938732	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTTTTGCCATTGCTT	NA	False	NA	21	True	AATAAA	-31	NA	11190577	11204472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.20	chr4	+	1791	12	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	50	-1046	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.3862193472497	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTGTTTTGTAATAAA	3	True	NA	NA	False	AATAAA	-17	NA	11191785	11203629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191808_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.21	chr4	+	5015	10	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	50	-201	intron_retention	FALSE	canonical	3	208	junction_1	27.2111088426114	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTGCCATTGCTTGT	3	True	NA	23	True	AATAAA	-33	NA	11191785	11204474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11195156_11197152_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.22	chr4	+	1324	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	56	1528	50	-1521	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTAGTGCTGTAACT	3	True	NA	NA	False	TATAAA	-11	NA	11191785	11203154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.23	chr4	+	4447	10	NIC	ENSMUSG00000028212.17	novel	3006	12	NA	NA	82	-243	intron_retention	FALSE	canonical	3	223	junction_4	26.1949010211181	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTGAAAAAA	896	False	NA	-19	True	TATAAA	-40	NA	11192678	11204432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11201417_11202189_11202348_11202984
ES.22927.3	chr4	+	3575	12	FSM	ENSMUSG00000028212.17	ENSMUST00000170901.8	3006	12	-776	207	-773	-207	multi-exon	FALSE	canonical	0	0	junction_1	77.194291742887	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAAGTTTTGCCATT	NA	False	NA	17	True	AATAAA	-27	NA	11190577	11204468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191545_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.5	chr4	+	3132	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	27	-251	21	154	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTGTCTCTGACCGA	336	False	NA	NA	False	NA	NA	NA	11191756	11204933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.7	chr4	+	2667	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	188	47	-181	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTCTTTTTCCTTCT	0	True	NA	43	True	AGTAAA	-18	NA	11191782	11204494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.8	chr4	+	2114	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	53	741	47	-734	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTCACTTTATTGCA	0	True	NA	NA	False	ATTAAA	-19	NA	11191782	11203941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22927.9	chr4	+	2597	12	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	47	-243	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.3862193472497	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTGAAAAAA	0	True	NA	-19	True	TATAAA	-40	NA	11191782	11204432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11191808_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ES.22928.1	chr4	+	177	1	Intergenic	novelGene_18836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7791	False	NA	NA	False	NA	NA	NA	11210202	11210379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11210200_11210400
ES.22929.1	chr4	+	5524	1	Antisense	novelGene_ENSMUSG00000040738.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCAGTTGCAGTGGTA	NA	False	NA	NA	False	NA	NA	NA	11232191	11237715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_11232200_11237700
ES.2293.1	chr10	+	1215	8	NNC	ENSMUSG00000040034.16	novel	750	3	NA	NA	-4457	3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	433.966235872736	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGGCTTGCTGCTTGC	NA	False	NA	23	True	AATAAA	-23	NA	7538809	7554648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7538915_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ES.2293.10	chr10	+	1255	8	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	430.625269171445	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543277	7554645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552107_7554331
ES.2293.12	chr10	+	3013	6	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	4	-6	intron_retention	FALSE	canonical	3	1165	junction_3	75.3084324627727	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCCCAATGTTGGCTT	NA	False	NA	14	True	AATAAA	-14	NA	7543281	7554639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ES.2293.13	chr10	+	8691	3	NNC	ENSMUSG00000040034.16	novel	750	3	NA	NA	4	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	594.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCCCAATGTTGGCTT	NA	False	NA	14	True	AATAAA	-14	NA	7543281	7554639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7544776_7544977_7546884_7549348
ES.2293.14	chr10	+	8007	15	Fusion	ENSMUSG00000040034.16_ENSMUSG00000040021.14	novel	1286	8	NA	NA	4	13	intron_retention	FALSE	canonical	1	6	junction_8	587.980858358432	402	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATTATGTTATTTTTA	NA	False	NA	36	True	AATAAA	-39	NA	7543281	7592237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331_7554397_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.15	chr10	+	2333	7	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	1090	junction_2	91.1496023030271	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGGCTTGCTGCTTGC	NA	False	NA	23	True	AATAAA	-23	NA	7543304	7554648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7552127_7554331
ES.2293.19	chr10	+	1910	10	Fusion	ENSMUSG00000040034.16_ENSMUSG00000040021.14	novel	1286	8	NA	NA	14	-15641	multi-exon	FALSE	canonical	1	6	junction_8	485.56048815191	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTGCTCTCTCTCATT	NA	False	NA	3	True	NA	NA	NA	7543317	7573709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331_7554397_7567098_7567579_7573265
ES.2293.2	chr10	+	1308	1	Antisense	novelGene_ENSMUSG00000019795.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTCCGTTTTTTTCCT	NA	False	NA	NA	False	AGTAAA	-13	NA	7538810	7540118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_7538800_7540100
ES.2293.20	chr10	+	5986	2	ISM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	4113	-5	861	5	intron_retention	FALSE	canonical	3	1165	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTTGCTGCTTGCTT	NA	False	NA	25	True	AATAAA	-25	NA	7547379	7554650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7549485_7550769
ES.2293.21	chr10	+	1805	3	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	2828	-4	intron_retention	FALSE	canonical	3	1165	junction_1	75	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCAATGTTGGCTTGC	NA	False	NA	16	True	AATAAA	-16	NA	7549346	7554641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7549485_7550769_7552127_7554331
ES.2293.22	chr10	+	7925	1	Genic_Genomic	ENSMUSG00000040021.14	novel	NA	NA	NA	NA	-271	-24719	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCAGGAGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	7556706	7564631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_7556700_7564600
ES.2293.23	chr10	+	2843	4	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-223	13096	-223	-10222	5prime_fragment	FALSE	canonical	3	58	junction_3	34.7658836600865	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAACGGTTAATTTATAC	NA	False	NA	NA	False	NA	NA	NA	7556754	7579128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373
ES.2293.24	chr10	+	7256	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-34	-13	-34	13	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATTATGTTATTTTTA	NA	False	NA	36	True	AATAAA	-39	NA	7556943	7592237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.25	chr10	+	4843	4	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-22	-10338	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	59.5669557911282	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATAGCATTTTCAGTTA	NA	False	NA	NA	False	AGTAAA	-17	NA	7556955	7579012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7575056
ES.2293.26	chr10	+	6876	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-21	354	-21	-354	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGTTTTTGAATCTAA	NA	False	NA	NA	False	AATAAA	-28	NA	7556956	7591870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.27	chr10	+	7076	8	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-21	2	intron_retention	FALSE	canonical	0	0	junction_2	29.3181005593501	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAGCTGAATTA	NA	False	NA	25	True	AATAAA	-28	NA	7556956	7592226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567423_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.28	chr10	+	3191	5	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-20	10206	-20	-7332	5prime_fragment	FALSE	canonical	3	31	junction_4	43.0312386528671	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCACTTTTGAAATGT	NA	False	NA	NA	False	ATTAAA	-27	NA	7556957	7582018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223
ES.2293.29	chr10	+	1298	4	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-20	-15644	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.4730521840743	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGCCCTGCTCTCTCTC	NA	False	NA	0	True	NA	NA	NA	7556957	7573706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7565008_7565129_7567098_7567579_7573265
ES.2293.3	chr10	+	1298	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	-8	-4	-8	4	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTTGCTGCTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	7543258	7554649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ES.2293.30	chr10	+	1184	3	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-20	18512	-20	-15638	5prime_fragment	FALSE	canonical	3	105	junction_1	19	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCTCTCTCATTTTA	NA	False	NA	6	True	NA	NA	NA	7556957	7573712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7557215_7567098_7567579_7573265
ES.2293.31	chr10	+	5708	7	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-10	0	intron_retention	FALSE	canonical	2	3	junction_3	44.2621609152659	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	23	True	AATAAA	-26	NA	7556967	7592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7557215_7567098_7567579_7573265_7573414_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.32	chr10	+	3121	4	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	-7	12602	-7	-9728	5prime_fragment	FALSE	canonical	3	58	junction_3	34.7658836600865	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACCGCTTTACTGTT	NA	False	NA	NA	False	TATAAA	-11	NA	7556970	7579622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373
ES.2293.33	chr10	+	6721	9	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-7	-371	intron_retention	FALSE	canonical	0	0	junction_8	40.9265729691603	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATTTAAAGTAAAACAG	NA	False	NA	NA	False	AATAAA	-11	NA	7556970	7591853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264_7588573_7588696
ES.2293.34	chr10	+	3165	3	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.5	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTATGACTGGAAAGC	NA	False	NA	18	True	AATAAA	-21	NA	7556971	7592219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567401_7589599
ES.2293.36	chr10	+	2578	7	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-5	-251	intron_retention	FALSE	canonical	2	3	junction_3	44.2621609152659	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTTGAAGATTTTT	NA	False	NA	NA	False	GATAAA	-15	NA	7556972	7589099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7557215_7567098_7567579_7573265_7573414_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.37	chr10	+	6245	9	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	-4	-360	intron_retention	FALSE	canonical	0	0	junction_4	40.9265729691603	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACAGTCTGTTTTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	7556973	7591864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7577723_7578330_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.38	chr10	+	3589	5	ISM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	7	9781	7	-6907	5prime_fragment	FALSE	canonical	3	31	junction_4	43.0312386528671	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTTCATTTTTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	7556984	7582443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223
ES.2293.39	chr10	+	7154	9	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_8	40.9265729691603	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	23	True	AATAAA	-26	NA	7556985	7592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264_7590863_7590909
ES.2293.4	chr10	+	2600	7	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	-8	3	intron_retention	FALSE	non_canonical	0	0	junction_4	456.455456023185	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGGCTTGCTGCTTGC	NA	False	NA	23	True	AATAAA	-23	NA	7543258	7554648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7543446_7543765_7543889_7545316_7546884_7549348_7549485_7550774_7550922_7552003_7552127_7554331
ES.2293.40	chr10	+	7066	9	NNC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	10	-9	intron_retention	FALSE	canonical	0	0	junction_8	40.9265729691603	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCAATTATGACTGGA	NA	False	NA	14	True	AATAAA	-17	NA	7556987	7592215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264_7588573_7588696
ES.2293.41	chr10	+	6971	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	98	140	98	-140	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTTGGATATTTCT	NA	False	NA	NA	False	TATAAA	-42	NA	7557075	7592084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ES.2293.42	chr10	+	4983	1	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	13958	-3399	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTTAGCCACGACTC	NA	False	NA	NA	False	AATAAA	-15	NA	7580968	7585951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7581000_7586000
ES.2293.6	chr10	+	5222	5	NNC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	3	3	intron_retention	TRUE	non_canonical	0	0	junction_1	532.630441769901	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGGCTTGCTGCTTGC	NA	False	NA	23	True	AATAAA	-23	NA	7543269	7554648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7544776_7544977_7546884_7549348_7549485_7550769_7552127_7554331
ES.2293.7	chr10	+	1596	7	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	1090	junction_1	90.8087122594645	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAATGTTGGCTTGCT	NA	False	NA	17	True	AATAAA	-17	NA	7543273	7554642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ES.2293.9	chr10	+	1193	7	NIC	ENSMUSG00000040034.16	novel	1286	8	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	455.428156305202	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCAATGTTGGCTTGC	NA	False	NA	16	True	AATAAA	-16	NA	7543277	7554641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7543446_7543765_7543889_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ES.22930.1	chr4	+	201	1	Intergenic	novelGene_18837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCTACATTTTCAG	NA	False	NA	NA	False	NA	NA	NA	11244940	11245141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11244900_11245100
ES.22931.1	chr4	+	155	1	Intergenic	novelGene_18838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	11250891	11251046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11250900_11251000
ES.22932.1	chr4	-	3639	3	Intergenic	novelGene_18831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	2	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	NA	False	NA	2	True	NA	NA	NA	11191288	11175961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11178675_11182460_11183243_11191144
ES.22932.2	chr4	-	6202	3	Intergenic	novelGene_18830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	NA	False	NA	2	True	NA	NA	NA	11191272	11175961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11178675_11179877_11183239_11191144
ES.22932.3	chr4	-	3181	2	Antisense	novelGene_ENSMUSG00000028212.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	NA	False	NA	2	True	NA	NA	NA	11191612	11175961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11178675_11191144
ES.22932.4	chr4	-	5081	2	Intergenic	novelGene_18829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTTTCATGTTTCCT	6395	False	NA	2	True	NA	NA	NA	11184828	11175961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11178675_11182460
ES.22932.5	chr4	-	5244	3	Intergenic	novelGene_18833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTTTCATGTTTC	NA	False	NA	0	True	NA	NA	NA	11191283	11175963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11180836_11182460_11182694_11191144
ES.22932.6	chr4	-	3408	3	Intergenic	novelGene_18832	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTTTCATGTTTC	48	False	NA	0	True	NA	NA	NA	11191175	11175963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11178675_11182460_11183127_11191144
ES.22932.7	chr4	-	7694	1	Intergenic	novelGene_18834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGGTCTTTCATGTTT	7565	False	NA	-1	True	NA	NA	NA	11183658	11175964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11176000_11183700
ES.22932.8	chr4	-	3951	1	Intergenic	novelGene_18835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTGTCCCAAGCGGGA	9137	False	NA	NA	False	NA	NA	NA	11182086	11178135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11178100_11182100
ES.22933.1	chr4	-	3102	26	NNC	ENSMUSG00000040738.11	novel	2604	2	NA	NA	32	6623	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	93.5852637972453	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTCGCTATCTCAG	-6	True	NA	NA	False	AATAAA	-19	NA	11254226	11192534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11192694_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.10	chr4	-	3397	25	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	29	176	combination_of_known_splicesites	FALSE	canonical	2	14	junction_17	93.0297051573672	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAGTGTTTAATTTTA	-9	True	NA	NA	False	AATAAA	-20	NA	11254229	11203933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.13	chr4	-	3475	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	160	172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	91.2942200546377	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGAAAAAGTGTTTAAT	159	False	NA	NA	False	AATAAA	-16	NA	11254098	11203937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218665_11218789_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.14	chr4	-	4204	1	NIC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	5044	172	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGAAAAAGTGTTTAAT	1135	False	NA	NA	False	AATAAA	-16	NA	11208141	11203937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11203900_11208100
ES.22933.15	chr4	-	4851	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	39	170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	119.804111565209	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTTTGAAAAAGTGTTTA	1	True	NA	NA	False	AATAAA	-14	NA	11254219	11203939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11224239_11224694_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.16	chr4	-	3672	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	0	169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	91.7723901706452	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTGAAAAAGTGTTT	-1	True	NA	NA	False	AATAAA	-13	NA	11254258	11203940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208880_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.17	chr4	-	3465	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	22	-267	22	-6	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATACATTTAATATT	-16	True	NA	NA	False	AATAAA	-14	NA	11254236	11204115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.18	chr4	-	3317	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	-3	-94	-3	92	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGTTTATAATTTCTTC	-4	True	NA	80	True	TATAAA	-29	NA	11254261	11204288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.2	chr4	-	3326	27	NIC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	19	32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.9833725648411	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCTCAGACTAAAACCT	18	False	11254257	NA	False	NA	NA	NA	11254239	11199125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11199452_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.20	chr4	-	7418	26	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	53	7	intron_retention	FALSE	canonical	3	373	junction_21	32.4407151585781	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTGGTGTTTTCTTT	15	True	NA	-5	True	ATTAAA	-29	NA	11254205	11204373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.22	chr4	-	3406	20	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	-5649	1	intron_retention	FALSE	canonical	3	32	junction_19	98.5643763643267	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAATTTAGTGGTGTT	6601	False	NA	-11	True	ATTAAA	-23	NA	11241617	11204379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580
ES.22933.23	chr4	-	3193	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_20	86.2362672370636	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACAATTTAGTGGTGT	-3	True	NA	-12	True	ATTAAA	-22	NA	11254260	11204380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.24	chr4	-	3201	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.589574748069	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACAATTTAGTGGTGT	-9	True	NA	-12	True	ATTAAA	-22	NA	11254229	11204380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11205034_11205118_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.25	chr4	-	3079	26	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_24	92.9993892453063	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTACAATTTAGTGGTG	0	True	NA	-13	True	ATTAAA	-21	NA	11254257	11204381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11252775_11252951_11253980
ES.22933.28	chr4	-	2946	25	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	32	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_17	93.0297051573672	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTACAATTTAGTGGTG	-6	True	NA	-13	True	ATTAAA	-21	NA	11254226	11204381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.3	chr4	-	3395	28	NNC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	120.598507453451	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAATATTAATACTTCAAA	2	True	NA	NA	False	AATAAA	-19	NA	11254218	11199156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11199452_11204463_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218671_11218764_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.30	chr4	-	3081	26	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	92.4873526488892	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTACAATTTAGTGGTG	-9	True	NA	-13	True	ATTAAA	-21	NA	11254229	11204381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.32	chr4	-	3500	26	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	31	0	intron_retention	FALSE	canonical	3	32	junction_19	87.7282166694388	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-7	True	NA	-14	True	ATTAAA	-20	NA	11254227	11204382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.33	chr4	-	3640	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	119.489724992144	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGTACAATTTAGTGG	23	True	NA	-15	True	ATTAAA	-19	NA	11254197	11204383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11220599_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.34	chr4	-	3380	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	91.6971152585814	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGTACAATTTAGTGG	286	False	NA	-15	True	ATTAAA	-19	NA	11253971	11204383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253532
ES.22933.35	chr4	-	3167	26	FSM	ENSMUSG00000040738.11	ENSMUST00000108318.3	3169	26	0	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_4	92.871920406547	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGTACAATTTAGTG	-1	True	NA	-16	True	ATTAAA	-18	NA	11254258	11204384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.37	chr4	-	3192	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	91.5319082980705	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGTACAATTTAGTG	-6	True	NA	-16	True	ATTAAA	-18	NA	11254226	11204384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230515_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.39	chr4	-	3147	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	123.802889002817	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATGTACAATTTAGT	1	True	NA	-17	True	ATTAAA	-17	NA	11254219	11204385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228965_11230332_11230494_11231648_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.4	chr4	-	4612	1	NIC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	6162	1698	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2253	False	NA	NA	False	ACTAAA	-38	NA	11207023	11202411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11202400_11207000
ES.22933.40	chr4	-	3085	28	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	90.2662727711741	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATGTACAATTTAGT	21	True	NA	-17	True	ATTAAA	-17	NA	11254199	11204385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980_11254053_11254125
ES.22933.41	chr4	-	3191	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.6141251608838	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATATGTACAATTTAG	18	False	11254257	-18	True	ATTAAA	-16	NA	11254239	11204386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209456_11211877_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.44	chr4	-	2801	25	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	99	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	127.483005403335	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATATGTACAATTTAG	98	False	NA	-18	True	ATTAAA	-16	NA	11254159	11204386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245754_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.45	chr4	-	4090	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	32	-3	intron_retention	FALSE	canonical	0	0	junction_6	143.020253458761	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATATGTACAATTTAG	-6	True	NA	-18	True	ATTAAA	-16	NA	11254226	11204386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11212791_11212932_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.46	chr4	-	3148	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	119.226333664393	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATATGTACAATTTAG	-9	True	NA	-18	True	ATTAAA	-16	NA	11254229	11204386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211921_11213701_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.5	chr4	-	5161	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	-3	1696	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_20	86.2362672370636	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	-4	True	NA	NA	False	ACTAAA	-36	NA	11254261	11202413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.50	chr4	-	5219	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	29	-4	intron_retention	FALSE	canonical	0	0	junction_1	162.122479085573	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACATATGTACAATTTA	-9	True	NA	-19	True	ATTAAA	-15	NA	11254229	11204387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11205034_11205118_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11212791_11213810_11216456_11216576_11218611_11218674_11218768_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.51	chr4	-	3205	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	8	7	8	-6	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATACATATGTACAATT	7	True	NA	-21	True	ATTAAA	-13	NA	11254250	11204389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.52	chr4	-	3171	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	91.9411713764994	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATACATATGTACAATT	-6	True	NA	-21	True	ATTAAA	-13	NA	11254226	11204389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234699_11235505_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.54	chr4	-	3074	26	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	22	4366	22	6	5prime_fragment	FALSE	canonical	3	373	junction_21	32.4407151585781	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGTTTGTTCATTTAC	-16	True	NA	NA	False	ATTAAA	-28	NA	11254236	11208748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.55	chr4	-	3013	25	ISM	ENSMUSG00000040738.11	ENSMUST00000108318.3	3169	26	19	4379	19	-7	5prime_fragment	FALSE	canonical	0	0	junction_3	94.7760426684344	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTGCAAAGATCTTG	18	False	11254257	NA	False	ATTAAA	-15	NA	11254239	11208761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11208870_11209211_11209277_11209391_11209466_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.56	chr4	-	2925	21	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	9	11821	9	-7449	5prime_fragment	FALSE	canonical	3	373	junction_16	31.3341267630039	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAATAAAAAATAAA	8	True	NA	NA	False	NA	NA	NA	11254249	11216203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.57	chr4	-	2585	1	NIC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	-1589	-10152	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGTCCCTGAGACT	NA	False	NA	NA	False	AATAGA	-4	NA	11221491	11218906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11218900_11221500
ES.22933.58	chr4	-	2893	17	ISM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	67	16179	67	-11807	5prime_fragment	FALSE	canonical	3	373	junction_12	28.2309116926818	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGGTCCTCTTCTCGT	66	False	NA	NA	False	AGTAAA	-15	NA	11254191	11220561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.59	chr4	-	1048	7	NNC	ENSMUSG00000040738.11	novel	3433	28	NA	NA	32	-10800	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	152.226439519845	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGGTGATAGGTT	-6	True	NA	NA	False	NA	NA	NA	11254226	11243367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11243547_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.6	chr4	-	4700	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	13	-1493	13	1220	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGAGTCTCTATCTT	12	False	11254257	NA	False	NA	NA	NA	11254245	11202889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22933.8	chr4	-	3740	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	18	-538	18	265	multi-exon	FALSE	canonical	3	373	junction_22	31.9212464720813	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAGCATTTATATCTTG	17	False	11254257	NA	False	AGTAAA	-18	NA	11254240	11203844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ES.22934.1	chr4	+	237	1	Intergenic	novelGene_18839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAACTAAAAAGCATGG	NA	False	NA	NA	False	NA	NA	NA	11254567	11254804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11254600_11254800
ES.22934.2	chr4	+	104	1	Intergenic	novelGene_18840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGACTTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	11254568	11254672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11254600_11254700
ES.22935.1	chr4	-	277	1	Intergenic	novelGene_18841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGGATGCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	11255475	11255198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11255200_11255500
ES.22936.1	chr4	+	173	1	Intergenic	novelGene_18842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	11291308	11291481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11291300_11291500
ES.22937.1	chr4	-	6720	20	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	-12	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.2903026742549	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGATCTTTCTTGTTGT	NA	False	NA	0	True	AATAAA	-33	NA	11322149	11261305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11262879_11262933_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.11	chr4	-	6568	20	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	16	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.4440681019744	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACAATTCTTGTGTAA	6	True	NA	NA	False	TATAAA	-24	NA	11322121	11261726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292687_11295356_11295505_11295935_11296060_11303311_11303458_11303946_11304069_11304203_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.12	chr4	-	3399	19	NIC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	36	-3514	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	16.6982108896007	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGGTGCCTCACGCC	116	False	NA	NA	False	ATTAAA	-13	NA	11322011	11264828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321714
ES.22937.13	chr4	-	4799	16	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	-5	-3980	intron_retention	FALSE	canonical	0	0	junction_3	23.4534053438349	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGTTGATTGTTTTTAT	-15	True	NA	NA	False	ATTAAA	-17	NA	11322142	11265294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11265943_11267612_11267772_11273006_11273140_11281003_11281125_11285053_11285174_11287474_11288292_11288398_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.14	chr4	-	1967	13	ISM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	26143	3992	7367	-3992	3prime_fragment	FALSE	canonical	3	53	junction_7	8.12873845617442	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACATAAAGGGAAGTT	NA	False	NA	NA	False	ATTAAA	-5	NA	11295994	11265306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935
ES.22937.15	chr4	-	206	1	Intergenic	novelGene_18843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTAGGTATTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	11309257	11309051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11309100_11309300
ES.22937.2	chr4	-	6764	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	-10	0	-10	0	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	NA	False	NA	-9	True	AATAAA	-24	NA	11322147	11261314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.3	chr4	-	6594	21	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.5040422055441	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	-3	True	NA	-9	True	AATAAA	-24	NA	11322130	11261314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11262879_11262933_11264507_11264585_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290504_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.4	chr4	-	6688	20	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	16.2903026742549	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	0	True	NA	-9	True	AATAAA	-24	NA	11322127	11261314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11262860_11262915_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.5	chr4	-	6873	20	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	20.684545330088	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAACTCGTACTTGATC	-2	True	NA	-11	True	AATAAA	-22	NA	11322129	11261316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295356_11295486_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.7	chr4	-	5506	1	NIC	ENSMUSG00000045205.17	novel	5954	13	NA	NA	36539	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAACTCGTACTTGATC	NA	False	NA	-11	True	AATAAA	-22	NA	11266822	11261316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11261300_11266800
ES.22937.8	chr4	-	6660	18	NIC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.9740286042773	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAACTCGTACTTGATC	-1	True	NA	-11	True	AATAAA	-22	NA	11322128	11261316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11265943_11267612_11267772_11273006_11273140_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22937.9	chr4	-	6556	19	NNC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.5936583790277	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTAACTCGTACTTGAT	-2	True	NA	-12	True	AATAAA	-21	NA	11322129	11261317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11262879_11262933_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ES.22938.1	chr4	+	158	1	Intergenic	novelGene_18845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	11363681	11363839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11363700_11363800
ES.22939.1	chr4	+	169	1	Intergenic	novelGene_18846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	11373272	11373441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11373300_11373400
ES.2294.1	chr10	-	3991	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	34	-1534	-5	1526	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTGGTTCAACTTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	7539033	7503610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.10	chr10	-	2608	9	FSM	ENSMUSG00000019795.18	ENSMUST00000161123.8	2607	9	-13	12	-13	-4	multi-exon	FALSE	canonical	3	19	junction_6	305.06638621782	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACCCACCAGTCTGGAT	NA	False	NA	-12	True	AATAAA	-8	NA	7539041	7505148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524230_7524425_7524814_7524920_7538838
ES.2294.11	chr10	-	5931	8	NNC	ENSMUSG00000019795.18	novel	2491	8	NA	NA	-17	-810	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.721560029683	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGGCCTTTGAATC	NA	False	NA	2	True	AATAAA	-17	NA	7539045	7505954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7509481_7512240_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.12	chr10	-	3583	7	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	12252	841	180	-833	3prime_fragment	FALSE	canonical	3	339	junction_1	154.244124685513	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATTAAAAGCAAAA	NA	False	NA	-21	True	NA	NA	NA	7527120	7505977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814
ES.2294.13	chr10	-	1598	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	318	841	13	-833	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATTAAAAGCAAAA	NA	False	NA	-21	True	NA	NA	NA	7539054	7505977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.14	chr10	-	1644	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	14	833	14	-833	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATTAAAAGCAAAA	NA	False	NA	-21	True	NA	NA	NA	7539053	7505977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.15	chr10	-	3512	2	NNC	ENSMUSG00000019795.18	novel	2757	8	NA	NA	13519	-1304	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTGAAGAGTGGCTT	NA	False	NA	-9	True	ATTAAA	-26	NA	7511400	7506448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7509514_7510953
ES.2294.16	chr10	-	1153	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	30	1308	-9	-1308	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTTTTGAAGAGTG	NA	False	NA	-13	True	ATTAAA	-22	NA	7539037	7506452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.17	chr10	-	1123	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	317	1317	12	-1309	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGTTTTGAAGAGT	NA	False	NA	-14	True	ATTAAA	-21	NA	7539055	7506453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.18	chr10	-	1105	8	NNC	ENSMUSG00000019795.18	novel	2757	8	NA	NA	18	-1309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	276.750974778439	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGTTTTGAAGAGT	NA	False	NA	-14	True	ATTAAA	-21	NA	7539049	7506453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7506741_7513819_7513978_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.19	chr10	-	1229	9	NNC	ENSMUSG00000019795.18	novel	2607	9	NA	NA	-2	-1310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	337.351240363808	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATTAGTTTTGAAGAG	NA	False	NA	-15	True	ATTAAA	-20	NA	7539374	7506454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524230_7524428_7524814_7524920_7539247
ES.2294.2	chr10	-	9113	6	NNC	ENSMUSG00000019795.18	novel	2757	8	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_1	300.327421325459	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	False	NA	0	True	AATAAA	-20	NA	7539026	7505136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7509481_7512240_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.20	chr10	-	959	7	NIC	ENSMUSG00000019795.18	novel	2757	8	NA	NA	3	-1312	combination_of_known_splicesites	TRUE	canonical	2	2	junction_1	278.754023389001	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAATTAGTTTTGAAG	NA	False	NA	-17	True	ATTAAA	-18	NA	7539064	7506456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7506741_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.21	chr10	-	1023	8	NNC	ENSMUSG00000019795.18	novel	2491	8	NA	NA	320	-1312	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	297.696805080441	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAATTAGTTTTGAAG	NA	False	NA	-17	True	ATTAAA	-18	NA	7538705	7506456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538632
ES.2294.23	chr10	-	2971	6	FSM	ENSMUSG00000019795.18	ENSMUST00000160250.2	1369	6	324	-1926	19	-3	multi-exon	FALSE	canonical	3	667	junction_2	40.4009900868778	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCATCATTCTTGCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	7539048	7513496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.24	chr10	-	3526	5	NIC	ENSMUSG00000019795.18	novel	1369	6	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	667	junction_1	45.1497508298772	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCATCATTCTTGCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	7539039	7513496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.25	chr10	-	1907	7	NNC	ENSMUSG00000019795.18	novel	1132	7	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	352.657057209976	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCCATCATTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	7539041	7513500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7514760_7515808_7515891_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.26	chr10	-	2010	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-885	7	-538	-7	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCCATCATTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	7539910	7513500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.27	chr10	-	3678	6	NNC	ENSMUSG00000019795.18	novel	2607	9	NA	NA	27	-7	intron_retention	FALSE	canonical	2	7	junction_4	354.454171932	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCCATCATTCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	7538998	7513500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7516580_7520088_7520194_7523353_7523386_7524230_7524428_7524814_7524920_7538838
ES.2294.29	chr10	-	1024	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	-51	159	-9	-159	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGACTCGCAGCTTT	NA	False	NA	NA	False	ATTAAA	-45	NA	7539076	7513652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.3	chr10	-	2467	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	289	1	-16	-1	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGATCCTTGGTAGTC	NA	False	NA	-1	True	AATAAA	-19	NA	7539083	7505137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.30	chr10	-	1560	1	NIC	ENSMUSG00000019795.18	novel	2607	9	NA	NA	8436	499	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGGTGACCAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	7516483	7514923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7514900_7516500
ES.2294.4	chr10	-	8574	7	NNC	ENSMUSG00000019795.18	novel	1132	7	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_1	279.492844273337	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGATCCTTGGTAGTC	NA	False	NA	-1	True	AATAAA	-19	NA	7539052	7505137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7509481_7512240_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.5	chr10	-	2497	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	0	-6	0	-2	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGGATCCTTGGTAGT	NA	False	NA	-2	True	AATAAA	-18	NA	7539067	7505138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.6	chr10	-	2139	6	NIC	ENSMUSG00000019795.18	novel	2757	8	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	300.327421325459	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTCTGGATCCTTGGTA	NA	False	NA	-4	True	AATAAA	-16	NA	7539014	7505140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7506741_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.7	chr10	-	6735	8	NNC	ENSMUSG00000019795.18	novel	2491	8	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.721560029683	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCAGTCTGGATCCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	7539038	7505143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7509481_7512240_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ES.2294.8	chr10	-	2673	9	NNC	ENSMUSG00000019795.18	novel	2491	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	331.187800764159	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	False	NA	-8	True	AATAAA	-12	NA	7539052	7505144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524230_7524428_7524814_7524920_7538838
ES.22940.1	chr4	-	3733	16	FSM	ENSMUSG00000040728.16	ENSMUST00000108311.9	3864	16	236	-105	132	0	multi-exon	FALSE	canonical	0	0	junction_2	3.40978982734518	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCACTCTTCTTCTTG	7353	False	NA	2	True	AATAAA	-21	NA	11386547	11331932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11333474_11338721_11338832_11344111_11344263_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ES.22940.2	chr4	-	3910	15	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.51382110749967	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCACTCTTCTTCTTG	7025	False	NA	2	True	AATAAA	-21	NA	11386875	11331932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11333474_11338721_11338832_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ES.22940.3	chr4	-	4184	3	ISM	ENSMUSG00000040728.16	ENSMUST00000043781.14	3743	15	30893	0	11392	0	3prime_fragment	FALSE	canonical	0	0	junction_1	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCACTCTTCTTCTTG	NA	False	NA	2	True	AATAAA	-21	NA	11355786	11331932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11333474_11344111_11344263_11353294
ES.22940.4	chr4	-	1804	3	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	7375	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGCACTCTTCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	11359803	11331934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11333474_11357459_11357659_11359737
ES.22940.5	chr4	-	3764	14	NIC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	-58	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	2.77776462850274	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCGCACTCTTCTTCT	7059	False	NA	0	True	AATAAA	-19	NA	11386841	11331934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11333474_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ES.22940.6	chr4	-	3644	15	NNC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	105	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.70672307009403	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTCGCACTCTTCTTC	9	True	NA	-1	True	AATAAA	-18	NA	11386574	11331935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11333474_11344111_11344263_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365482_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ES.22940.7	chr4	-	4605	3	ISM	ENSMUSG00000040728.16	ENSMUST00000147342.8	1892	11	10927	-1069	10927	-3	3prime_fragment	FALSE	canonical	0	0	junction_2	2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTCGCACTCTTCTTC	NA	False	NA	-1	True	AATAAA	-18	NA	11356251	11331935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_11333474_11338721_11338832_11353294
ES.22940.8	chr4	-	6252	14	NNC	ENSMUSG00000040728.16	novel	3864	16	NA	NA	687	-57	intron_retention	FALSE	canonical	0	0	junction_2	3.01671870017347	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTAATGTGCATTCTTA	8193	False	NA	NA	False	AATAAA	-15	NA	11385707	11333061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11333474_11338721_11338832_11351912_11352027_11353294_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646
ES.22940.9	chr4	-	176	1	Intergenic	novelGene_18844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATCTAGTAAT	NA	False	NA	NA	False	NA	NA	NA	11361503	11361327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11361300_11361500
ES.22941.1	chr4	+	185	1	Intergenic	novelGene_18847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATTAAAAAAGAAATTGA	NA	False	NA	NA	False	NA	NA	NA	11458274	11458459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11458300_11458500
ES.22942.1	chr4	-	246	1	Intergenic	novelGene_18848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATAGACTGGCAGGCTA	NA	False	NA	NA	False	NA	NA	NA	11484804	11484558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11484600_11484800
ES.22943.1	chr4	+	5749	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	-42	799	-42	-799	multi-exon	TRUE	canonical	3	55	junction_9	10.2468585254619	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATATATTTTTCCC	NA	False	NA	15	True	AATAAA	-20	NA	11485915	11549885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.10	chr4	+	5635	24	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-23	-802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.7306032360806	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTATATATTTTT	-4	True	NA	12	True	AATAAA	-17	NA	11486019	11549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505448_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.11	chr4	+	6798	22	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-19	-804	intron_retention	FALSE	canonical	3	55	junction_9	10.2255737382625	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGTTTGTATATATTT	0	True	NA	10	True	AATAAA	-15	NA	11486023	11549880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.12	chr4	+	6947	23	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_7	18.0870256224667	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTGTATGAGTCT	3	True	NA	NA	False	TATAAA	-29	NA	11486026	11550684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508182_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.14	chr4	+	8121	24	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-6	-802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.0958557901745	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTATATATTTTT	13	True	NA	12	True	AATAAA	-17	NA	11486036	11549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11510619_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542049_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.15	chr4	+	6382	24	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.6382468083591	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATAAGTGTATGA	13	True	NA	NA	False	TATAAA	-25	NA	11486036	11550680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498786_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.17	chr4	+	5480	23	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-6	-803	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	17.2219348890394	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTGTATATATTTT	13	True	NA	11	True	AATAAA	-16	NA	11486036	11549881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11549544
ES.22943.18	chr4	+	5356	23	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-4	-800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.9386533646118	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTATATATTTTTCC	15	True	NA	14	True	AATAAA	-19	NA	11486038	11549884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514012_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527264_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.19	chr4	+	6373	24	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.7306032360806	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	15	True	NA	NA	False	TATAAA	-34	NA	11486038	11550689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11546025_11546301_11548730_11548875_11549544
ES.22943.2	chr4	+	5700	23	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-29	-801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.8840501674445	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATATATTTTTC	NA	False	NA	13	True	AATAAA	-18	NA	11485928	11549883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498831_11505416_11505611_11506967_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.22	chr4	+	6313	15	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	27612	-799	intron_retention	FALSE	canonical	3	58	junction_1	9.92420253311909	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATATATTTTTCCC	NA	False	NA	15	True	AATAAA	-20	NA	11513654	11549885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11514169_11518925_11521260_11522852_11522936_11526346_11526441_11526594_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.23	chr4	+	3848	17	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	27869	-804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.5513837733618	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGTTTGTATATATTT	NA	False	NA	10	True	AATAAA	-15	NA	11513911	11549880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528783_11530824_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.24	chr4	+	5925	11	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	39219	5	intron_retention	FALSE	canonical	3	71	junction_8	5.21632054229799	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	NA	False	NA	NA	False	TATAAA	-34	NA	11525261	11550689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11526441_11526594_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.25	chr4	+	1587	5	ISM	ENSMUSG00000040720.16	ENSMUST00000108307.3	6571	25	55553	804	55553	-804	3prime_fragment	FALSE	canonical	3	71	junction_2	6.41774882649672	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGTTTGTATATATTT	6312	False	NA	10	True	AATAAA	-15	NA	11541595	11549880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.3	chr4	+	7701	22	NNC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-25	-801	intron_retention	FALSE	canonical	0	0	junction_12	22.2237641188431	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATATATTTTTC	NA	False	NA	13	True	AATAAA	-18	NA	11485932	11549883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526900_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11548875_11549544
ES.22943.4	chr4	+	6528	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	-17	-5	-17	5	multi-exon	FALSE	canonical	3	55	junction_9	10.2468585254619	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	NA	False	NA	NA	False	TATAAA	-34	NA	11485940	11550689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.5	chr4	+	3972	13	FSM	ENSMUSG00000040720.16	ENSMUST00000055372.14	3954	13	-11	-7	-11	7	multi-exon	FALSE	canonical	3	55	junction_9	7.54799458281617	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATACTTTTTTAACAGG	NA	False	NA	NA	False	AATAAA	-22	NA	11485946	11527628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594
ES.22943.6	chr4	+	5537	23	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	17	-799	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	17.6625859417233	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATATATTTTTCCC	5	False	NA	15	True	AATAAA	-20	NA	11485974	11549885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.7	chr4	+	6190	23	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	19	-805	intron_retention	FALSE	canonical	3	55	junction_9	10.2936231563988	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTATGTTTGTATATATT	7	False	NA	9	True	AATAAA	-14	NA	11485976	11549879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.8	chr4	+	5394	22	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	27	-799	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	17.9615361271065	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATATATTTTTCCC	15	False	NA	15	True	AATAAA	-20	NA	11485984	11549885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22943.9	chr4	+	6156	22	NIC	ENSMUSG00000040720.16	novel	6506	24	NA	NA	-24	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.3503339427533	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATAAGTGTATGA	-5	True	NA	NA	False	TATAAA	-25	NA	11486018	11550680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11486106_11498739_11498827_11501308_11501358_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ES.22944.1	chr4	+	2930	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.2889793663457	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	NA	False	NA	19	True	AGTAAA	-16	NA	11558863	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563430_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.10	chr4	+	2430	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-22	-5	-2	5	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGAATTTATGTTAT	-27	True	NA	NA	False	AATAAA	-14	NA	11558919	11585749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ES.22944.11	chr4	+	2842	15	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	82.4728774216353	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	-26	True	NA	22	True	AGTAAA	-19	NA	11558920	11615808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.12	chr4	+	5360	12	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	84	junction_11	75.3727925132117	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-26	True	NA	19	True	AGTAAA	-16	NA	11558920	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11615442
ES.22944.13	chr4	+	2634	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	89.6292825142747	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTTGTTTGCTTTCTT	-26	True	NA	5	True	AGTAAA	-2	NA	11558920	11615791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612382_11612439_11612617_11612819_11615442
ES.22944.14	chr4	+	5481	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-1	2	intron_retention	FALSE	canonical	3	27	junction_7	86.2317210904562	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	-26	True	NA	21	True	AGTAAA	-18	NA	11558920	11615807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
ES.22944.15	chr4	+	2808	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	1	combination_of_known_splicesites	TRUE	canonical	1	1	junction_2	91.4068219587122	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTGTATCCTTAAG	-24	True	NA	20	True	AGTAAA	-17	NA	11558922	11615806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.16	chr4	+	1980	4	FSM	ENSMUSG00000078773.12_ENSMUSG00000094595.2	ENSMUST00000108306.9	652	4	-25	-1303	2	1303	multi-exon	FALSE	canonical	3	39	junction_3	82.7056359761668	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTCTGAGGAGTTCT	-23	True	NA	NA	False	NA	NA	NA	11558923	11580260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633
ES.22944.17	chr4	+	3279	6	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	94.6348772916201	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGAATTTATGTTAT	-17	True	NA	NA	False	AATAAA	-14	NA	11558929	11585749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11579328_11580108_11583676
ES.22944.18	chr4	+	2623	6	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	101.227269053353	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATTTATGTTATGT	-17	True	NA	NA	False	AATAAA	-16	NA	11558929	11585751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11576646_11576768_11578633_11578714_11583676
ES.22944.2	chr4	+	2943	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-69	-4	-19	4	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTATCCTTAAGTGT	NA	False	NA	23	True	AGTAAA	-20	NA	11558902	11615809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.20	chr4	+	3225	6	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.9341820262785	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATATATTGAATTTA	-17	True	NA	NA	False	AATAAA	-8	NA	11558929	11585743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563430_11569820_11569933_11578633_11578714_11579328_11580108_11583676
ES.22944.21	chr4	+	4521	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_3	91.5940621559183	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTGTGTGTATCCTT	-17	True	NA	17	True	AGTAAA	-14	NA	11558929	11615803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.22	chr4	+	4350	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	8	1860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	107.007885223473	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCCATTCGTCAGAGT	-17	True	NA	NA	False	AATAAA	-26	NA	11558929	11587604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11583469_11583545_11583676
ES.22944.23	chr4	+	2909	16	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	103.519831701735	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.24	chr4	+	5271	12	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	3	intron_retention	FALSE	canonical	3	27	junction_7	90.9128181054122	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	-16	True	NA	22	True	AGTAAA	-19	NA	11558930	11615808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11615442
ES.22944.25	chr4	+	4491	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_2	112.119072376347	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	-16	True	NA	18	True	AGTAAA	-15	NA	11558930	11615804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563430_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612712_11612819_11615442
ES.22944.26	chr4	+	2501	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	9	7	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	91.7261549395809	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATTTATGTTATGT	-16	True	NA	NA	False	AATAAA	-16	NA	11558930	11585751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11583676
ES.22944.27	chr4	+	7463	4	FSM	ENSMUSG00000078773.12_ENSMUSG00000094595.2	ENSMUST00000108306.9	652	4	-18	-6793	9	6	multi-exon	FALSE	canonical	3	39	junction_3	82.7056359761668	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	-16	True	NA	NA	False	AATAAA	-15	NA	11558930	11585750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633
ES.22944.28	chr4	+	5380	13	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	-1	intron_retention	FALSE	canonical	2	11	junction_8	103.937481208657	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	-16	True	NA	18	True	AGTAAA	-15	NA	11558930	11615804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604953_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
ES.22944.29	chr4	+	2448	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	86.901724506607	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-16	True	NA	19	True	AGTAAA	-16	NA	11558930	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
ES.22944.3	chr4	+	2658	6	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	-11	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	94.8400759173041	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATGTTATGTATTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	11558910	11585757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11579976_11580108_11583676
ES.22944.30	chr4	+	3895	5	NIC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	9	7	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	90.9202947641504	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAATTTATGTTATGT	-16	True	NA	NA	False	AATAAA	-16	NA	11558930	11585751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11580108_11583676
ES.22944.31	chr4	+	5703	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-9	-18	intron_retention	FALSE	canonical	0	0	junction_2	115.212949222902	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGAGTTGTTTGCTT	-14	True	NA	1	True	AATACA	-3	NA	11558932	11615787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11568514_11568769_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
ES.22944.32	chr4	+	5450	13	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-8	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	108.991080165101	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTTTGCTTTCTTGTG	-13	True	NA	8	True	AGTAAA	-5	NA	11558933	11615794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559020_11563331_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604953_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
ES.22944.33	chr4	+	4124	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-8	-1713	-8	1713	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGTTGTACATAAAAT	-13	True	NA	NA	False	ATTAAA	-28	NA	11558933	11587457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ES.22944.34	chr4	+	4513	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	84	junction_12	72.1646939684189	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-13	True	NA	19	True	AGTAAA	-16	NA	11558933	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11615442
ES.22944.35	chr4	+	4258	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	-8	-1847	-8	1847	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTAAATCCAGAATTC	-13	True	NA	NA	False	AATAAA	-13	NA	11558933	11587591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ES.22944.36	chr4	+	4617	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-8	-9	intron_retention	FALSE	canonical	2	11	junction_8	87.0767871703207	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGCTTTCTTGTGTG	-13	True	NA	10	True	AGTAAA	-7	NA	11558933	11615796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604953_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.37	chr4	+	2785	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	83.7823955011932	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	-12	True	NA	22	True	AGTAAA	-19	NA	11558934	11615808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610441_11612371_11612439_11612617_11612819_11615442
ES.22944.38	chr4	+	1845	11	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.9337780732821	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-3	True	NA	19	True	AGTAAA	-16	NA	11558943	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593721_11604953_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.39	chr4	+	4355	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-3	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	99.4019104238866	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTTTGAAAATGAACAAA	-1	True	NA	-72	True	AATACA	-12	NA	11558945	11615714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11597572_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.4	chr4	+	3010	16	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	94.5965937841081	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	NA	False	NA	19	True	AGTAAA	-16	NA	11558911	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.42	chr4	+	2720	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.5822132029355	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTGCTTTCTTGT	3	True	NA	7	True	AGTAAA	-4	NA	11558949	11615793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563430_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.43	chr4	+	2869	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	107.393635086735	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTGCTTTCTTGT	3	True	NA	7	True	AGTAAA	-4	NA	11558949	11615793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609599_11610303_11610441_11612371_11612439_11612617_11612819_11615457
ES.22944.44	chr4	+	2805	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	87.8348403748391	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGAGTTGTTTGCTT	3	True	NA	1	True	AATACA	-3	NA	11558949	11615787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604934_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.45	chr4	+	3799	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	101.465687374037	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTGTATCCTTAAG	3	True	NA	20	True	AGTAAA	-17	NA	11558949	11615806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609599_11610303_11611343_11612371_11612439_11612617_11612819_11615442
ES.22944.46	chr4	+	4690	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_4	108.5941705505	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	3	True	NA	19	True	AGTAAA	-16	NA	11558949	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604953_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.47	chr4	+	2472	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	88.4465539148264	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTGTGTGTATCCTT	7	True	NA	17	True	AGTAAA	-14	NA	11558953	11615803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610353_11612371_11612439_11615442
ES.22944.48	chr4	+	2671	6	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	94.6348772916201	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATATTGAATTTATGTT	9	True	NA	NA	False	AATAAA	-12	NA	11558955	11585747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11579908_11580108_11583676
ES.22944.49	chr4	+	4600	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	7	-10	intron_retention	FALSE	canonical	3	27	junction_7	82.94619343838	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTGCTTTCTTGTGT	9	True	NA	9	True	AGTAAA	-6	NA	11558955	11615795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.5	chr4	+	5573	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-10	3	intron_retention	FALSE	canonical	3	154	junction_7	67.3700394999307	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	NA	False	NA	22	True	AGTAAA	-19	NA	11558911	11615808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
ES.22944.51	chr4	+	5224	12	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	9	-11	intron_retention	FALSE	canonical	2	11	junction_8	94.3791369297437	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTTTGCTTTCTTGTG	11	True	NA	8	True	AGTAAA	-5	NA	11558957	11615794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604953_11605006_11606045_11606337_11609293_11612439_11615442
ES.22944.52	chr4	+	3578	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.1113486539344	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	12	True	NA	19	True	AGTAAA	-16	NA	11558958	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11611343_11612371_11612439_11612617_11612819_11615442
ES.22944.53	chr4	+	1833	3	Fusion	ENSMUSG00000078773.12_ENSMUSG00000094595.2	novel	652	4	NA	NA	10	1303	multi-exon	FALSE	canonical	0	0	junction_2	101.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTCTGAGGAGTTCT	12	True	NA	NA	False	NA	NA	NA	11558958	11580260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_11559014_11563326_11563478_11578633
ES.22944.54	chr4	+	4471	14	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	10	-10	intron_retention	FALSE	canonical	2	6	junction_4	112.237122190624	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTGCTTTCTTGTGT	12	True	NA	9	True	AGTAAA	-6	NA	11558958	11615795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599680_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11615442
ES.22944.56	chr4	+	1849	8	ISM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	-9	13577	-9	-3916	5prime_fragment	FALSE	canonical	3	154	junction_7	24.0458745241809	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTCTGTGTTGTGTG	16	True	NA	NA	False	TTTAAA	-14	NA	11558962	11602228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550
ES.22944.57	chr4	+	2595	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-9	-83	combination_of_known_splicesites	FALSE	canonical	3	84	junction_13	71.5348220745028	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAACAAAATTATTTA	16	True	NA	-64	True	AATACA	-20	NA	11558962	11615722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
ES.22944.58	chr4	+	2922	16	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-6	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	93.6455729510655	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGTAAAAGCTGAGT	19	True	NA	-8	True	TTTAAA	-35	NA	11558965	11615778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609300_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.59	chr4	+	2814	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.0062903595939	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTGTGTGTATCCTT	19	True	NA	17	True	AGTAAA	-14	NA	11558965	11615803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604925_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.6	chr4	+	4386	12	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_7	90.6170764561214	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTTGTGTGTATCCTT	NA	False	NA	17	True	AGTAAA	-14	NA	11558911	11615803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.60	chr4	+	2849	15	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	86.646625757164	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTTGTGTGTATCCT	19	True	NA	16	True	AGTAAA	-13	NA	11558965	11615802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601735_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.61	chr4	+	2536	11	ISM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	3	5774	3	-750	5prime_fragment	FALSE	canonical	3	154	junction_7	67.4747360128219	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATAGAGTTTGAAATT	28	True	NA	NA	False	TATAAA	-14	NA	11558974	11610031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293
ES.22944.62	chr4	+	2300	12	NNC	ENSMUSG00000078773.12	novel	801	6	NA	NA	2042	-27	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	122.04029953562	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGTAAAAGCTGAGT	5066	False	NA	-8	True	TTTAAA	-35	NA	11578684	11615778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11578714_11593620_11593816_11595666_11595940_11597831_11597995_11599680_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11612617_11612819_11615442
ES.22944.63	chr4	+	6243	2	NNC	ENSMUSG00000094595.2	novel	4358	2	NA	NA	-291	-1843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	289	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTGAATTTATGTTA	5755	False	NA	NA	False	AATAAA	-13	NA	11579373	11585748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11583545_11583676
ES.22944.64	chr4	+	3002	13	Fusion	ENSMUSG00000078773.12_ENSMUSG00000094595.2	novel	801	6	NA	NA	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	95.3043006491429	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTCTTGTGTGTAT	4	True	NA	13	True	AGTAAA	-10	NA	11579664	11615799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_11580108_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.66	chr4	+	3261	1	Genic_Genomic	ENSMUSG00000078773.12_ENSMUSG00000094595.2	novel	NA	NA	NA	NA	5313	647	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACACTTGAACTTTGGT	5317	False	NA	NA	False	AATATA	-14	NA	11584977	11588238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_11585000_11588200
ES.22944.67	chr4	+	1938	9	ISM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	40702	-2	3781	2	3prime_fragment	FALSE	canonical	3	142	junction_6	80.5822561113797	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	NA	False	NA	21	True	AGTAAA	-18	NA	11599673	11615807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.68	chr4	+	1141	4	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	5787	-745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.288300318632	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTTTGAAATTTTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	11601679	11610036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11601735_11604953_11605006_11606045_11606337_11609293
ES.22944.69	chr4	+	4259	4	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-4849	-20	intron_retention	FALSE	canonical	3	84	junction_3	126.449814375331	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTGAGTTGTTTGC	39	False	NA	-1	True	AATACA	-1	NA	11604525	11615785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11605006_11606045_11606337_11609293_11612439_11615442
ES.22944.7	chr4	+	4738	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-10	2	intron_retention	FALSE	canonical	3	154	junction_7	65.0873786836229	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	NA	False	NA	21	True	AGTAAA	-18	NA	11558911	11615807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.70	chr4	+	3332	6	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-4536	-1	intron_retention	FALSE	canonical	3	207	junction_3	55.5280109494298	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	352	False	NA	18	True	AGTAAA	-15	NA	11604838	11615804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
ES.22944.71	chr4	+	1021	5	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-3314	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	138.637116242369	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTGTATCCTTAAGT	1574	False	NA	21	True	AGTAAA	-18	NA	11606060	11615807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11606337_11609293_11609470_11610303_11610441_11612371_11612439_11615442
ES.22944.72	chr4	+	1984	5	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-3119	0	intron_retention	FALSE	canonical	3	142	junction_2	85.9447496942076	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	1769	False	NA	19	True	AGTAAA	-16	NA	11606255	11615805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11606337_11609293_11610566_11612371_11612439_11612617_11612819_11615442
ES.22944.73	chr4	+	2373	3	NNC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-499	-1	intron_retention	FALSE	canonical	0	0	junction_1	42	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	4389	False	NA	18	True	AGTAAA	-15	NA	11608875	11615804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11609114_11610665_11612439_11615442
ES.22944.74	chr4	+	6267	1	Genic_Genomic	ENSMUSG00000078773.12	novel	NA	NA	NA	NA	167	3	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATCCTTAAGTG	5055	False	NA	22	True	AGTAAA	-19	NA	11609541	11615808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_11609500_11615800
ES.22944.75	chr4	+	4305	2	ISM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	52346	4	1943	-4	intron_retention	FALSE	canonical	3	283	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTCTTGTGTGTATCC	6831	False	NA	15	True	AGTAAA	-12	NA	11611317	11615801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_11612439_11612617
ES.22944.8	chr4	+	3828	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	99.0075754677388	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGAATTTATGTTATG	-30	True	NA	NA	False	AATAAA	-15	NA	11558916	11585750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578713_11580108_11583676
ES.22944.9	chr4	+	2577	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	96.9667789143156	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTGTGTATCCTTA	-27	True	NA	18	True	AGTAAA	-15	NA	11558919	11615804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11612617_11612819_11615442
ES.22945.1	chr4	-	5488	1	Antisense	novelGene_ENSMUSG00000040720.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCACTCAGTCACATG	NA	False	NA	NA	False	TTTAAA	-44	NA	11514147	11508659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11508700_11514100
ES.22946.1	chr4	-	573	3	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACCCTCAAGTTT	69	False	NA	NA	False	NA	NA	NA	11559127	11529827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11530005_11539891_11540003_11558842
ES.22946.2	chr4	-	4678	1	Antisense	novelGene_ENSMUSG00000040720.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11539960	11535282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11535300_11540000
ES.22946.3	chr4	-	2027	2	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTTTGGATTTTTAT	61	False	NA	NA	False	AATAAA	-38	NA	11559135	11549881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11551616_11558842
ES.22947.1	chr4	-	165	1	Intergenic	novelGene_18849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTGAACTAC	NA	False	NA	NA	False	NA	NA	NA	11560325	11560160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11560200_11560300
ES.22948.1	chr4	-	4699	2	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	11575600	11570562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11571058_11571396
ES.22948.2	chr4	-	4655	2	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGGCTATACAGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	11575600	11570604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11571066_11571406
ES.22948.3	chr4	-	4318	1	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTAGTTCTTAATTTT	NA	False	NA	NA	False	CATAAA	-36	NA	11577913	11573595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11573600_11577900
ES.22949.1	chr4	-	176	1	Intergenic	novelGene_18850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCATTCTAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	11582314	11582138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_11582100_11582300
ES.2295.1	chr10	-	1536	1	Genic_Genomic	ENSMUSG00000019795.18	novel	NA	NA	NA	NA	-334	-30970	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGAGCTGCTTCTTGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	7557234	7555698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_7555700_7557200
ES.22950.1	chr4	-	2595	3	Antisense	novelGene_ENSMUSG00000078773.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3932	False	NA	NA	False	NA	NA	NA	11611076	11604485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_11605001_11606039_11606335_11609291
ES.22951.1	chr4	+	881	1	Intergenic	novelGene_18851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11618259	11619140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_11618300_11619100
ES.22952.1	chr4	+	2096	5	FSM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	-62	-28	-62	28	multi-exon	FALSE	canonical	1	1	junction_2	2.17944947177034	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGAGTCTTTTCCTCT	9556	False	NA	NA	False	AATAAA	-45	NA	11704394	11714780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11704567_11705904_11706242_11711138_11711216_11711969_11712175_11713475
ES.22953.1	chr4	+	3425	18	NNC	ENSMUSG00000028217.12	novel	3462	18	NA	NA	-35637	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.235294117647059	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTTCAATTGTTCTT	NA	False	NA	NA	False	TATAAA	-25	NA	11722509	11817884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_11722619_11767733_11767804_11771267_11771367_11780091_11780227_11781150_11781290_11783081_11783241_11783335_11783536_11784625_11784758_11785121_11785273_11795484_11795701_11797694_11797772_11799560_11799753_11803876_11804122_11807429_11807561_11810234_11810475_11814610_11814728_11814856_11814971_11816985
ES.22954.1	chr4	-	4644	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	33	-476	1	476	multi-exon	FALSE	canonical	3	21	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGAGAGTCTTTGGCTA	-5	True	NA	NA	False	AATAAA	-26	NA	11966419	11957707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11966301
ES.22954.10	chr4	-	2576	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	2	1623	2	0	multi-exon	FALSE	canonical	3	21	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-36	True	NA	NA	False	AATAAA	-20	NA	11966450	11959806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11966301
ES.22954.11	chr4	-	2613	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-25	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-38	True	NA	NA	False	AATAAA	-20	NA	11966452	11959806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613_11965649_11966301
ES.22954.12	chr4	-	3277	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108301.8	2635	2	-642	0	-11	0	multi-exon	FALSE	canonical	3	53	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	11966463	11959806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613
ES.22954.13	chr4	-	3031	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	-525	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	21.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-38	True	NA	NA	False	AATAAA	-20	NA	11966452	11959806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613_11965649_11965883
ES.22954.2	chr4	-	4231	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	-20	-10	-20	10	multi-exon	FALSE	canonical	3	21	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTGTCAATATCCATG	NA	False	NA	3	True	AATAAA	-31	NA	11966472	11958173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11966301
ES.22954.3	chr4	-	4239	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-25	-1626	0	3	multi-exon	FALSE	canonical	3	47	junction_2	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATCTGGCTGTCAAT	-38	True	NA	-4	True	AATAAA	-24	NA	11966452	11958180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613_11965649_11966301
ES.22954.4	chr4	-	4228	2	NNC	ENSMUSG00000049225.15	novel	4201	2	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGAAATCTGGCTGT	-36	True	NA	-8	True	AATAAA	-20	NA	11966450	11958184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_11962234_11966271
ES.22954.5	chr4	-	4575	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	-447	-1622	46	-1	multi-exon	FALSE	canonical	3	10	junction_2	21.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGAAATCTGGCTGT	40	True	NA	-8	True	AATAAA	-20	NA	11966374	11958184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613_11965649_11965883
ES.22954.7	chr4	-	4016	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	33	152	1	-152	multi-exon	FALSE	canonical	3	21	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGCCTGTGTGGGTTT	-5	True	NA	-4	True	ATTAAA	-18	NA	11966419	11958335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11966301
ES.22954.8	chr4	-	4074	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	-15	-1471	10	-152	multi-exon	FALSE	canonical	3	47	junction_2	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGCCTGTGTGGGTTT	-28	True	NA	-4	True	ATTAAA	-18	NA	11966442	11958335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_11962234_11965613_11965649_11966301
ES.22954.9	chr4	-	6614	1	NIC	ENSMUSG00000049225.15	novel	4201	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-6	True	NA	NA	False	AATAAA	-20	NA	11966420	11959806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_11959800_11966400
ES.22955.1	chr4	+	505	2	FSM	ENSMUSG00000085614.2	ENSMUST00000154194.2	535	2	48	-18	39	18	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTAATCAGGCTCCTT	710	False	NA	NA	False	AATAAA	-33	NA	11966612	11994298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_11966684_11993864
ES.22955.2	chr4	+	1542	2	NIC	ENSMUSG00000085614.2	novel	770	5	NA	NA	86	-2	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCAGCGTTCACTGAGA	9	True	NA	NA	False	NA	NA	NA	11966659	11981659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_11966684_11980141
ES.22956.1	chr4	-	3528	29	FSM	ENSMUSG00000049488.15	ENSMUST00000108293.3	3945	29	707	-290	707	0	multi-exon	FALSE	canonical	0	0	junction_28	9.16368999288574	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGCGTTATTGAT	NA	False	NA	NA	False	AATAAA	-32	NA	12089313	12039354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714_12088002_12089285
ES.22956.3	chr4	-	7596	27	NIC	ENSMUSG00000049488.15	novel	3533	29	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_15	10.9956957689719	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAAATTTTGGTTTGCG	46	True	NA	NA	False	AATAAA	-24	NA	12087915	12039362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12059787_12059896_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12079969_12085911_12086001_12087714
ES.22956.5	chr4	-	3942	27	NIC	ENSMUSG00000049488.15	novel	3456	28	NA	NA	0	-1	intron_retention	FALSE	canonical	3	27	junction_9	5.92220273269166	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAATTTTGGTTTGC	4	True	NA	NA	False	AATAAA	-23	NA	12087957	12039363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ES.22956.6	chr4	-	5966	25	NNC	ENSMUSG00000049488.15	novel	3533	29	NA	NA	7966	-2	intron_retention	TRUE	non_canonical	0	0	junction_3	11.7856286071922	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTGTATTTAATTT	8000	False	NA	NA	False	AGTAAA	-16	NA	12079961	12039646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12039893_12040634_12040778_12043464_12043834_12045381_12045900_12046002_12046120_12047197_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12059787_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874
ES.22956.7	chr4	-	3695	27	NIC	ENSMUSG00000049488.15	novel	3945	29	NA	NA	14	-2	intron_retention	FALSE	canonical	3	27	junction_9	5.92220273269166	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTGTATTTAATTT	-32	True	NA	NA	False	AGTAAA	-16	NA	12087993	12039646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ES.22956.8	chr4	-	3164	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	-1	293	-1	-3	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTGTATTTAATT	3	True	NA	NA	False	AGTAAA	-15	NA	12087958	12039647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ES.22957.1	chr4	+	3432	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	-78	-27	-76	27	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	NA	False	NA	11	True	AATAAA	-19	NA	12089362	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
ES.22957.10	chr4	+	3497	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-52	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3536509852382	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACTTGTATTTGTGTA	2	True	NA	10	True	AATAAA	-18	NA	12089386	12096269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089524_12089662_12089818_12092522_12092573_12093114
ES.22957.11	chr4	+	2903	3	Fusion	ENSMUSG00000046667.15_ENSMUSG00000052137.12	novel	3147	3	NA	NA	-50	6	multi-exon	FALSE	canonical	0	0	junction_1	31.5	207	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAATTTCCTGTATTC	4	True	NA	NA	False	AATAAA	-24	NA	12089388	12146737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_12089506_12143409_12143460_12144001
ES.22957.12	chr4	+	3484	5	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-50	19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.3053492054733	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTACTAACTTGTAT	4	True	NA	3	True	AATAAA	-11	NA	12089388	12096262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12089662_12089728_12090318_12090423_12092522_12092573_12093114
ES.22957.13	chr4	+	3385	3	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-49	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	5	True	NA	11	True	AATAAA	-19	NA	12089389	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089569_12092522_12092573_12093114
ES.22957.14	chr4	+	2880	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	-51	498	-49	-177	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATGCAGTGAAAGTATA	5	True	NA	NA	False	AGTAAA	-18	NA	12089389	12095745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
ES.22957.15	chr4	+	3323	3	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-49	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	5	True	NA	12	True	AATAAA	-20	NA	12089389	12096271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12092522_12092573_12093114
ES.22957.16	chr4	+	3509	5	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-49	27	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.8130510014387	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	5	True	NA	11	True	AATAAA	-19	NA	12089389	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089524_12089662_12089728_12090318_12090423_12092522_12092573_12093114
ES.22957.17	chr4	+	3327	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-45	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3289469886838	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTAACTTGTATTTGTG	9	True	NA	8	True	AATAAA	-16	NA	12089393	12096267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089453_12089662_12089728_12092522_12092573_12093114
ES.22957.19	chr4	+	3546	5	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-43	25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.8589926331247	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	11	False	NA	9	True	AATAAA	-17	NA	12089395	12096268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089569_12089662_12089728_12090318_12090423_12092522_12092573_12093114
ES.22957.2	chr4	+	3413	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-75	27	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	14.4299072146089	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	NA	False	NA	11	True	AATAAA	-19	NA	12089363	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12089662_12089728_12092522_12092573_12093114
ES.22957.20	chr4	+	3445	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-39	27	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20.6774165590278	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	15	False	NA	11	True	AATAAA	-19	NA	12089399	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12089662_12089796_12092522_12092573_12093114
ES.22957.21	chr4	+	3453	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	6	19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.5455583227527	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTACTAACTTGTAT	62	False	NA	3	True	AATAAA	-11	NA	12089446	12096262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089569_12089662_12089796_12092522_12092573_12093114
ES.22957.22	chr4	+	3550	3	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	6	22	intron_retention	FALSE	canonical	3	12	junction_1	25	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTAACTTGTATTTG	62	False	NA	6	True	AATAAA	-14	NA	12089446	12096265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089796_12092522_12092573_12093114
ES.22957.23	chr4	+	4786	2	ISM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	1503	-28	1503	28	3prime_fragment	FALSE	canonical	3	62	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	1559	False	NA	12	True	AATAAA	-20	NA	12090943	12096271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_12092573_12093114
ES.22957.24	chr4	+	2928	1	Genic_Genomic	ENSMUSG00000052137.12	novel	NA	NA	NA	NA	4657	782	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTATTAATGATACTCAA	4713	False	NA	NA	False	AATAAA	-17	NA	12094097	12097025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12094100_12097000
ES.22957.25	chr4	+	3622	2	Intergenic	novelGene_18852	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTATTTGTCTATTTT	2418	False	NA	NA	False	NA	NA	NA	12098086	12101943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12099236_12099470
ES.22957.26	chr4	+	5649	1	Intergenic	novelGene_18854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGCTGCTCCTTATTC	4421	False	NA	NA	False	AAAACA	-25	NA	12100089	12105738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12100100_12105700
ES.22957.27	chr4	+	3879	1	Intergenic	novelGene_18855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACAGCCACATTCAATA	6076	False	NA	NA	False	AATAAA	-23	NA	12101744	12105623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12101700_12105600
ES.22957.28	chr4	+	2369	1	Intergenic	novelGene_18856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAGAGAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	12106887	12109256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12106900_12109300
ES.22957.29	chr4	+	3313	2	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-11982	358	multi-exon	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAATGACCTCTGAGTC	NA	False	NA	NA	False	AATAAA	-45	NA	12113307	12127610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12113539_12124528
ES.22957.3	chr4	+	4000	5	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-70	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.7790233867277	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGTATTTGTGTAAC	NA	False	NA	12	True	AATAAA	-20	NA	12089368	12096271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12089662_12090215_12090318_12090423_12092522_12092573_12093114
ES.22957.30	chr4	+	3303	2	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-11982	341	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAACTGAACAACTCTAT	NA	False	NA	NA	False	AATAAA	-28	NA	12113307	12127593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12113540_12124522
ES.22957.31	chr4	+	3234	1	FSM	ENSMUSG00000083246.2	ENSMUST00000120647.2	1953	1	-929	-352	-929	352	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTGAACAACTCTATT	NA	False	NA	NA	False	NA	NA	NA	12113354	12116588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12113400_12116600
ES.22957.32	chr4	+	3207	2	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-11929	328	multi-exon	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTAAAAAAAAAAAGGAAC	0	True	NA	NA	False	AATAAA	-15	NA	12113360	12127580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12113596_12124608
ES.22957.33	chr4	+	3921	2	Genic_Genomic	ENSMUSG00000083246.2	novel	1953	1	NA	NA	-922	1236	multi-exon	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCCCTTGCCCATGGAT	1	True	NA	NA	False	NA	NA	NA	12113361	12117472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12117043_12117232
ES.22957.34	chr4	+	4960	3	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-11925	2109	multi-exon	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGGTTTTTGTCTTT	4	True	NA	NA	False	AATAAA	-15	NA	12113364	12129361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12113538_12124522_12128665_12128716
ES.22957.36	chr4	+	3059	2	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-11732	359	multi-exon	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAATGACCTCTGAGTCA	96	False	NA	NA	False	AATAAA	-37	NA	12113557	12127611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12113724_12124718
ES.22957.37	chr4	+	2909	1	FSM	ENSMUSG00000083246.2	ENSMUST00000120647.2	1953	1	235	-1191	235	1191	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAAAAAGAA	1057	False	NA	NA	False	NA	NA	NA	12114518	12117427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12114500_12117400
ES.22957.38	chr4	+	3200	2	Genic_Genomic	ENSMUSG00000081593.2	novel	1963	1	NA	NA	-951	332	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGAACTGAA	37	False	NA	NA	False	AATAAA	-19	NA	12124338	12127584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12124474_12124519
ES.22957.39	chr4	+	3218	1	FSM	ENSMUSG00000081593.2	ENSMUST00000117060.2	1963	1	-923	-332	-923	332	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGAACTGAA	65	False	NA	NA	False	AATAAA	-19	NA	12124366	12127584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12124400_12127600
ES.22957.4	chr4	+	3492	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-68	27	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	24.3082062046727	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	NA	False	NA	11	True	AATAAA	-19	NA	12089370	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089524_12089662_12089796_12092522_12092573_12093114
ES.22957.40	chr4	+	3131	3	FSM	ENSMUSG00000046667.15	ENSMUST00000069128.8	3069	3	-52	-10	1	10	multi-exon	FALSE	canonical	3	38	junction_1	12.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCCTGTATTCATTG	-3	True	NA	NA	False	AATAAA	-28	NA	12140264	12146741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12140606_12143409_12143460_12144001
ES.22957.41	chr4	+	6308	2	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-4	14	intron_retention	FALSE	canonical	3	28	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTATTCATTGTGTT	13	False	NA	NA	False	AATAAA	-32	NA	12140280	12146745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140384_12140540
ES.22957.42	chr4	+	2956	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	14.7196014438797	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTCCTGTATTCATT	14	False	NA	NA	False	AATAAA	-27	NA	12140281	12146740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140384_12140540_12140606_12143409_12143460_12144001
ES.22957.43	chr4	+	2997	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	25.0377492776186	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCCTGTATTCATTG	4	False	NA	NA	False	AATAAA	-28	NA	12140304	12146741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140447_12140540_12140606_12143409_12143460_12144001
ES.22957.44	chr4	+	5116	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-12	2192	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	14.7196014438797	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGTATTTGTGTAACA	4	False	NA	NA	False	AATAAA	-21	NA	12140304	12148923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140384_12140540_12140606_12143409_12143460_12144001
ES.22957.45	chr4	+	3024	4	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	-12	14	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	21.6999743983464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTATTCATTGTGTT	4	False	NA	NA	False	AATAAA	-32	NA	12140304	12146745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140402_12140540_12140674_12143409_12143460_12144001
ES.22957.46	chr4	+	5896	2	NIC	ENSMUSG00000046667.15	novel	3069	3	NA	NA	-12	11	intron_retention	FALSE	canonical	3	63	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCCTGTATTCATTGT	4	False	NA	NA	False	AATAAA	-29	NA	12140304	12146742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_12143460_12144001
ES.22957.47	chr4	+	2865	3	NNC	ENSMUSG00000046667.15	novel	3069	3	NA	NA	-8	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCCTGTATTCATTG	8	False	NA	NA	False	AATAAA	-28	NA	12140308	12146741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140384_12143409_12143460_12144001
ES.22957.48	chr4	+	244	3	NNC	ENSMUSG00000046667.15	novel	2949	4	NA	NA	3	-1227	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATCAGAGTGTAAGGC	19	False	NA	NA	False	AATAAA	-30	NA	12140319	12143461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12140447_12140540_12140606_12143409
ES.22957.5	chr4	+	6900	1	Genic_Genomic	ENSMUSG00000052137.12	novel	NA	NA	NA	NA	-68	27	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	NA	False	NA	11	True	AATAAA	-19	NA	12089370	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12089400_12096300
ES.22957.6	chr4	+	3552	3	FSM	ENSMUSG00000052137.12	ENSMUST00000095143.9	3147	3	-59	-346	-59	25	multi-exon	FALSE	canonical	3	33	junction_1	14.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	-5	True	NA	9	True	AATAAA	-17	NA	12089379	12096268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12089728_12092522_12092573_12093114
ES.22957.7	chr4	+	3347	3	NIC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-58	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	-4	True	NA	9	True	AATAAA	-17	NA	12089380	12096268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_12089524_12092522_12092573_12093114
ES.22957.8	chr4	+	3458	4	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-57	27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.9131825880731	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTTGTATTTGTGTAA	-3	True	NA	11	True	AATAAA	-19	NA	12089381	12096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089569_12089662_12089728_12092522_12092573_12093114
ES.22957.9	chr4	+	3338	3	NNC	ENSMUSG00000052137.12	novel	3327	4	NA	NA	-52	25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	14.5	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAACTTGTATTTGTGT	2	True	NA	9	True	AATAAA	-17	NA	12089386	12096268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_12089506_12089662_12089728_12093114
ES.22958.1	chr4	-	174	1	Intergenic	novelGene_18853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	12098799	12098625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_12098600_12098800
ES.22959.1	chr4	-	1270	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-2	52999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.585310265056	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAGATTTAATGCACTA	124	False	NA	NA	False	ATTAAA	-20	NA	12171873	12100409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164199_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.10	chr4	-	5520	7	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_4	140.763394862916	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATAGTCTTTCTTTCAT	0	True	NA	-40	True	ATTAAA	-41	NA	12171832	12153721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12166626_12168222_12168325_12168964_12171219_12171697
ES.22959.12	chr4	-	2972	5	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	2148	0	intron_retention	FALSE	canonical	2	126	junction_4	114.1651763893	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATAGTCTTTCTTTCA	2977	False	NA	-41	True	ATTAAA	-40	NA	12169020	12153722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12165772_12168222
ES.22959.13	chr4	-	1330	8	NNC	ENSMUSG00000028218.20	novel	1325	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	136.290356315074	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATAGTCTTTCTTTCA	-23	True	NA	-41	True	ATTAAA	-40	NA	12172020	12153722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164199_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.15	chr4	-	5119	7	NIC	ENSMUSG00000028218.20	novel	1292	8	NA	NA	-55	-3	intron_retention	FALSE	canonical	3	346	junction_2	31.1430391723237	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTACATAGTCTTTCT	-1	True	NA	-45	True	ATTAAA	-36	NA	12171789	12153726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.16	chr4	-	2681	8	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	44	-22	intron_retention	FALSE	canonical	0	0	junction_4	136.290356315074	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGATTTTTTTTTC	5	True	NA	-64	True	ATTAAA	-17	NA	12171827	12153745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12165766_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.17	chr4	-	2774	3	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	15	17	intron_retention	TRUE	non_canonical	0	0	junction_1	180.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTCTTCAATCCACAAG	141	False	NA	NA	False	ACTAAA	-43	NA	12171856	12165325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12165342_12168619_12171219_12171697
ES.22959.18	chr4	-	810	4	FSM	ENSMUSG00000028218.20	ENSMUST00000126808.8	3584	4	166	2608	42	-2341	multi-exon	FALSE	canonical	3	350	junction_1	32.6019767635168	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTCAGTGCCCTTACC	3	True	NA	NA	False	ATTAAA	-12	NA	12171829	12167950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.2	chr4	-	5233	6	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-25	52913	intron_retention	FALSE	canonical	2	126	junction_4	94.4131346794502	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGTCTTTCTTTCAT	5	True	NA	NA	False	ATTAAA	-41	NA	12171759	12100495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12165772_12168222_12171219_12171697
ES.22959.4	chr4	-	1132	9	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-15	52912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	158.065601491912	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACACAGTCTTTCTTTCA	248	False	NA	NA	False	ATTAAA	-40	NA	12171749	12100496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12166843_12166923_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.5	chr4	-	5087	7	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-20	52911	intron_retention	FALSE	canonical	3	345	junction_1	28.3122470555294	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACACAGTCTTTCTTTC	243	False	NA	NA	False	ATTAAA	-39	NA	12171754	12100497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.6	chr4	-	1067	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	-58	52889	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	128.843204821098	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGATTTTTTTTTC	-4	True	NA	NA	False	ATTAAA	-17	NA	12171792	12100519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164193_12168228_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.7	chr4	-	1120	8	NNC	ENSMUSG00000028218.20	novel	648	7	NA	NA	36	52887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.585310265056	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGATTTTTTTT	-3	True	NA	NA	False	ATTAAA	-15	NA	12171835	12100521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12100753_12155648_12155769_12157650_12157765_12164087_12164199_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.8	chr4	-	1870	8	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	44	419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	136.290356315074	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAATTGCTTCCTGA	5	True	NA	NA	False	AAAACA	-16	NA	12171827	12152989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164199_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ES.22959.9	chr4	-	1248	8	NNC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-12	-147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	169.561378929548	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAGATTTAATAATGC	251	False	NA	NA	False	ATTAAA	-21	NA	12171746	12153555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164199_12168222_12168325_12168964_12169059_12170983_12171219_12171697
ES.2296.1	chr10	-	172	1	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAACAGATAGAA	NA	False	NA	NA	False	NA	NA	NA	7559587	7559415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7559400_7559600
ES.22960.1	chr4	+	1489	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-52	384	multi-exon	FALSE	canonical	3	4269	junction_1	0	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-4	True	NA	NA	False	NA	NA	NA	12232780	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904
ES.22960.11	chr4	+	1242	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	non_canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233512_12233757
ES.22960.12	chr4	+	1554	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	-51	-384	-51	384	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12232800_12234300
ES.22960.13	chr4	+	5043	4	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	4073	multi-exon	TRUE	non_canonical	0	0	junction_2	2012.42589925691	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-3	True	NA	NA	False	ATTAAA	-14	NA	12232781	12238024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12235291_12235339_12236534_12236618
ES.22960.15	chr4	+	944	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233320_12233863
ES.22960.16	chr4	+	1280	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	741	multi-exon	FALSE	non_canonical	0	0	junction_2	2134.5	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTTTGTGCATTT	-3	True	NA	NA	False	AAAAAG	-15	NA	12232781	12234692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233311_12233875
ES.22960.17	chr4	+	1909	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	-51	-739	-51	739	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	-3	True	NA	NA	False	AAAAAG	-13	NA	12232781	12234690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12232800_12234700
ES.22960.18	chr4	+	5147	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	4092	multi-exon	TRUE	non_canonical	0	0	junction_2	2134.5	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	-3	True	NA	NA	False	ATTAAA	-33	NA	12232781	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12235280_12235328
ES.22960.19	chr4	+	1320	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	canonical	1	41	junction_1	0	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233524_12233757
ES.22960.2	chr4	+	1392	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	canonical	1	51	junction_1	0	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233596_12233757
ES.22960.20	chr4	+	4920	4	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	4092	multi-exon	FALSE	non_canonical	0	0	junction_2	2012.42589925691	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	-3	True	NA	NA	False	ATTAAA	-33	NA	12232781	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233527_12233754_12235271_12235318
ES.22960.22	chr4	+	5140	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-43	4092	multi-exon	FALSE	non_canonical	0	0	junction_2	2134.5	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	5	True	NA	NA	False	ATTAAA	-33	NA	12232789	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12235271_12235318
ES.22960.23	chr4	+	3010	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-40	1961	multi-exon	TRUE	non_canonical	0	0	junction_1	0	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTCCTTTTATTCATAT	8	False	NA	NA	False	ATTAAA	-17	NA	12232792	12235912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232901_12235280_12235326
ES.22960.24	chr4	+	1279	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-40	384	multi-exon	FALSE	canonical	1	232	junction_2	2018.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	8	False	NA	NA	False	NA	NA	NA	12232792	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233476_12233673
ES.22960.25	chr4	+	1371	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-40	383	multi-exon	FALSE	canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTGTGTAGTTCAGT	8	False	NA	NA	False	NA	NA	NA	12232792	12234334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233626_12233730
ES.22960.26	chr4	+	5114	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-38	4092	multi-exon	FALSE	non_canonical	0	0	junction_1	0	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	10	False	NA	NA	False	ATTAAA	-33	NA	12232794	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12235271_12235320_12236534_12236618
ES.22960.27	chr4	+	5039	4	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-28	4092	multi-exon	TRUE	non_canonical	0	0	junction_2	2012.42589925691	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	0	True	NA	NA	False	ATTAAA	-33	NA	12232804	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12235283_12235331_12236534_12236618
ES.22960.29	chr4	+	1445	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-14	690	multi-exon	FALSE	non_canonical	0	0	junction_1	0	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATAGCATTAAGATT	14	False	NA	NA	False	AATAAA	-18	NA	12232818	12234641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233524_12233901
ES.22960.3	chr4	+	2544	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	4092	multi-exon	FALSE	canonical	3	49	junction_2	2110	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	-3	True	NA	NA	False	ATTAAA	-33	NA	12232781	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233967_12236618
ES.22960.30	chr4	+	5149	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-7	4070	multi-exon	TRUE	non_canonical	0	0	junction_1	0	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21	False	NA	NA	False	ATTAAA	-11	NA	12232825	12238021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12235281_12235327
ES.22960.31	chr4	+	1658	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	104	739	multi-exon	FALSE	non_canonical	0	0	junction_1	0	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	132	False	NA	NA	False	AAAAAG	-13	NA	12232936	12234690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233509_12233604
ES.22960.32	chr4	+	1676	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	406	3615	multi-exon	FALSE	canonical	3	49	junction_1	0	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGTTCCACTGTCATT	97	False	NA	NA	False	AATAAA	-12	NA	12233238	12237566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233967_12236618
ES.22960.33	chr4	+	4468	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	679	4073	multi-exon	TRUE	non_canonical	0	0	junction_1	0	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	370	False	NA	NA	False	ATTAAA	-14	NA	12233511	12238024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12235290_12235334
ES.22960.35	chr4	+	3908	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	697	3617	multi-exon	FALSE	non_canonical	0	0	junction_1	0	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCCACTGTCATTTC	388	False	NA	NA	False	AATAAA	-14	NA	12233529	12237568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12235271_12235316_12236534_12236618
ES.22960.36	chr4	+	1975	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	730	1633	multi-exon	FALSE	non_canonical	0	0	junction_1	0	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAATTTGCTCTCTTGT	421	False	NA	17	True	AATAAA	-24	NA	12233562	12235584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12235274_12235320
ES.22960.39	chr4	+	1054	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	766	740	multi-exon	FALSE	canonical	2	432	junction_1	0	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGGTTTTTGTGCATT	457	False	NA	NA	False	AAAAAG	-14	NA	12233598	12234691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233644_12233682
ES.22960.4	chr4	+	1052	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233301_12233736
ES.22960.46	chr4	+	1866	2	Intergenic	novelGene_18857	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	475	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	368	False	NA	NA	False	ATTAAA	-16	NA	12233996	12235911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12235285_12235333
ES.22960.48	chr4	+	3360	2	Intergenic	novelGene_18858	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	246	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	989	False	NA	NA	False	ATTAAA	-14	NA	12234617	12238024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12235284_12235330
ES.22960.5	chr4	+	1150	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	383	multi-exon	FALSE	canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTGTGTAGTTCAGT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233527_12233863
ES.22960.50	chr4	+	3035	2	Intergenic	novelGene_18859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	1330	False	NA	NA	False	ATTAAA	-33	NA	12234958	12238043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12235271_12235320
ES.22960.51	chr4	+	2856	3	Intergenic	novelGene_18860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1404	False	NA	NA	False	ATTAAA	-11	NA	12235032	12238021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12235271_12235318_12236534_12236618
ES.22960.52	chr4	+	2480	2	Intergenic	novelGene_18861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGTTCCACTGTCATT	1410	False	NA	NA	False	AATAAA	-12	NA	12235038	12237566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_12235271_12235318
ES.22960.6	chr4	+	2591	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	4073	multi-exon	FALSE	canonical	3	49	junction_1	0	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-3	True	NA	NA	False	ATTAAA	-14	NA	12232781	12238024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12233967_12236618
ES.22960.7	chr4	+	923	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	TRUE	non_canonical	0	0	junction_2	2134.5	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233311_12233875
ES.22960.8	chr4	+	1846	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	742	multi-exon	FALSE	canonical	3	4269	junction_1	0	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTTGTGCATTTT	-3	True	NA	NA	False	AAAAAG	-16	NA	12232781	12234693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904
ES.22960.9	chr4	+	1254	3	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	-51	384	multi-exon	FALSE	canonical	1	41	junction_2	2114	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	-3	True	NA	NA	False	NA	NA	NA	12232781	12234335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_12232839_12232904_12233524_12233757
ES.22961.1	chr4	+	3540	5	FSM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	-5	10	-5	-10	multi-exon	FALSE	canonical	2	7	junction_2	1.87082869338697	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTCAACCCAGAATTT	-8	True	NA	NA	False	AATAAA	-16	NA	12906852	12983543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_12906939_12917915_12918066_12962944_12963024_12974729_12974816_12980404
ES.22962.1	chr4	+	3608	11	FSM	ENSMUSG00000006586.16	ENSMUST00000006761.10	5783	11	-289	2464	-289	68	multi-exon	FALSE	canonical	0	0	junction_1	2.05182845286832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAAGCTATCTTT	354	False	NA	NA	False	NA	NA	NA	13743146	13891185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_13743730_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ES.22962.2	chr4	+	3142	12	NIC	ENSMUSG00000006586.16	novel	5783	11	NA	NA	-257	258	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.06505758029101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAATGCCATAA	386	False	NA	NA	False	AATGAA	-43	NA	13743178	13890581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_13743730_13771375_13771546_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ES.22962.3	chr4	+	3697	12	NIC	ENSMUSG00000006586.16	novel	5783	11	NA	NA	-250	26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.06505758029101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGGTTGTCCTCAAG	393	False	NA	NA	False	NA	NA	NA	13743185	13891143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_13743730_13771375_13771546_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ES.22962.4	chr4	+	5973	12	NIC	ENSMUSG00000006586.16	novel	5783	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.06505758029101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTATTCTGTCTCCCTT	50	False	NA	NA	False	AATAAA	-16	NA	13743415	13893649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_13743730_13771375_13771546_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ES.22962.5	chr4	+	3111	11	NIC	ENSMUSG00000006586.16	novel	6090	12	NA	NA	324	26	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.05182845286832	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGGTTGTCCTCAAG	36	False	NA	NA	False	NA	NA	NA	13751620	13891143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_13751749_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ES.22963.1	chr4	-	2964	1	Intergenic	novelGene_18862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATTCTCCATGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	13857741	13854777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_13854800_13857700
ES.22964.1	chr4	-	207	1	Intergenic	novelGene_18863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATACATAATCTTTAG	NA	False	NA	NA	False	AATAAA	-9	NA	13897728	13897521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_13897500_13897700
ES.22965.1	chr4	+	157	1	Intergenic	novelGene_18864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATTAATTTT	7647	False	NA	NA	False	NA	NA	NA	14292081	14292238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_14292100_14292200
ES.22966.1	chr4	-	172	1	Intergenic	novelGene_18865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAATGCAAC	NA	False	NA	NA	False	NA	NA	NA	14404855	14404683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14404700_14404900
ES.22967.1	chr4	-	5201	19	FSM	ENSMUSG00000040569.14	ENSMUST00000042221.14	5165	19	-36	0	-36	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTAAGTGGGGTTGTGTC	NA	False	NA	NA	False	AATAAA	-21	NA	14621841	14502429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14505503_14506412_14506517_14506602_14506658_14510146_14510248_14516152_14516202_14519392_14519531_14522830_14522898_14524461_14524569_14532558_14532655_14533603_14533682_14544161_14544276_14546301_14546450_14548409_14548493_14552360_14552514_14565439_14565605_14590312_14590486_14593809_14593921_14621191_14621425_14621688
ES.22968.1	chr4	-	920	7	NNC	ENSMUSG00000023151.10	novel	1242	9	NA	NA	-13173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATGCACTGGCCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	14770018	14623619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14623798_14665907_14666024_14703885_14704066_14708589_14708692_14756772_14756845_14769570_14769767_14769942
ES.22968.2	chr4	-	157	1	Intergenic	novelGene_18866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	14633834	14633677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14633700_14633800
ES.22968.3	chr4	-	2903	7	NNC	ENSMUSG00000023151.10	novel	1210	8	NA	NA	-13189	19917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTTCTGGTAATTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	14770034	14645836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14647982_14665907_14666024_14703885_14704066_14708589_14708692_14756772_14756845_14769570_14769767_14769942
ES.22968.4	chr4	-	3597	1	Intergenic	novelGene_18867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACCGAATCCAAGAACAC	NA	False	NA	NA	False	NA	NA	NA	14679688	14676091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14676100_14679700
ES.22969.1	chr4	+	7373	1	Antisense	novelGene_ENSMUSG00000023151.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACCAAGCAACTGTGTA	NA	False	NA	NA	False	TATAAA	-20	NA	14794092	14801465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_14794100_14801500
ES.2297.1	chr10	-	1973	1	Antisense	novelGene_ENSMUSG00000040021.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACCCCCACCCCTCGAA	NA	False	NA	NA	False	NA	NA	NA	7591485	7589512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_7589500_7591500
ES.22970.1	chr4	-	4936	1	Intergenic	novelGene_18868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACATGGTCTTCTAAAT	NA	False	NA	NA	False	AATAAA	-26	NA	14809451	14804515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14804500_14809500
ES.22971.1	chr4	-	3259	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	2	-4	2	4	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATATTCAAATTGTCA	0	True	NA	4	True	AATAAA	-23	NA	14826585	14809502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.12	chr4	-	3100	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	2	155	2	-155	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGAATGTGTCTTCACC	0	True	NA	-4	True	ATTAAA	-17	NA	14826585	14809661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.13	chr4	-	5358	6	NIC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	8	-210	intron_retention	FALSE	canonical	3	328	junction_5	15.72768260107	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGAACTTCCACAGCT	214	False	NA	-59	True	ATTAAA	-16	NA	14826387	14809716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_14811749_14812452_14812560_14815602_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.14	chr4	-	2909	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	47	301	47	238	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGTGATAAATG	61	False	NA	NA	False	AATAAA	-17	NA	14826540	14809807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.16	chr4	-	2727	8	NNC	ENSMUSG00000040550.18	novel	2647	8	NA	NA	-19	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	154.788993966177	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTATTGAAAATTCCATT	4	True	NA	69	True	AATAAA	-17	NA	14826414	14809974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818483_14819094_14819216_14822691_14822769_14825498_14825654_14826290
ES.22971.17	chr4	-	2772	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	14	471	14	68	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTATTGAAAATTCC	28	False	NA	66	True	AATAAA	-14	NA	14826573	14809977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.18	chr4	-	5591	6	NIC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-20	2	intron_retention	FALSE	canonical	3	323	junction_2	18.5752523536021	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTAATGTTATCTT	3	True	NA	0	True	AATAAA	-14	NA	14826415	14810043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_14811749_14812452_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.20	chr4	-	2478	7	NNC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	145.565277453107	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAGTAATGTTATCT	214	False	NA	-1	True	AATAAA	-13	NA	14826387	14810044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822769_14825498_14825654_14826327
ES.22971.22	chr4	-	2870	8	NNC	ENSMUSG00000040550.18	novel	2647	8	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	156.613002822439	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTGAAGTAATGTTA	34	False	NA	-4	True	AATAAA	-10	NA	14826567	14810047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14823970_14824145_14825498_14825654_14826290
ES.22971.23	chr4	-	2214	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	172	871	-20	-332	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAACGTTTTGTTGC	3	True	NA	NA	False	NA	NA	NA	14826415	14810377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.24	chr4	-	1486	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	183	1588	-9	-1049	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGGTGTTAATTGTGT	14	True	NA	NA	False	CATAAA	-21	NA	14826404	14811094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.26	chr4	-	1274	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	169	1814	-23	-1275	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGGCGACTCGGTG	0	True	NA	NA	False	AATGAA	-22	NA	14826418	14811320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ES.22971.4	chr4	-	3186	8	FSM	ENSMUSG00000040550.18	ENSMUST00000151012.3	2647	8	2	-541	2	2	multi-exon	FALSE	canonical	1	2	junction_5	152.637492385169	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	25	True	NA	2	True	AATAAA	-21	NA	14826393	14809504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14819094_14819216_14822691_14822773_14825498_14825654_14826290
ES.22971.5	chr4	-	3110	7	NNC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	131.082671115089	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	3	True	NA	2	True	AATAAA	-21	NA	14826415	14809504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826267
ES.22971.6	chr4	-	3004	6	NIC	ENSMUSG00000040550.18	novel	3266	7	NA	NA	-18	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	134.630457178159	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	5	True	NA	2	True	AATAAA	-21	NA	14826413	14809504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14825498_14825654_14826290
ES.22971.7	chr4	-	3834	2	ISM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	12545	-2	12353	2	3prime_fragment	FALSE	canonical	3	346	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	NA	False	NA	2	True	AATAAA	-21	NA	14814042	14809504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_14811749_14812452
ES.22971.8	chr4	-	3421	8	NNC	ENSMUSG00000040550.18	novel	2647	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	156.613002822439	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATTCAAATTGT	26	False	NA	2	True	AATAAA	-21	NA	14826575	14809504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14823970_14824145_14825498_14825654_14826290
ES.22972.1	chr4	+	176	1	Intergenic	novelGene_18869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAGATAGACAAA	NA	False	NA	NA	False	NA	NA	NA	14827327	14827503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_14827300_14827500
ES.22973.1	chr4	+	2103	7	NNC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	-1053	84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.090917210692	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTTTGTTCTATT	NA	False	NA	5	True	AATAAA	-12	NA	14863022	14915260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_14863065_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.10	chr4	+	2038	3	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	38052	-82	38052	82	3prime_fragment	FALSE	canonical	3	289	junction_1	22.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAATCACTTTGTTCTA	2717	False	NA	3	True	AATAAA	-10	NA	14902127	14915258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_14902540_14912431_14912523_14913723
ES.22973.2	chr4	+	2626	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	-198	-89	-198	89	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGTTCTATTTCTTC	NA	False	NA	10	True	AATAAA	-17	NA	14863877	14915265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.3	chr4	+	1305	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	-40	1074	-40	-1074	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTATTTTTGCATTT	2	True	NA	NA	False	AATAAA	-25	NA	14864035	14914102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.4	chr4	+	2233	6	NIC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	83	84	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	113.296778418453	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTTTGTTCTATT	38	False	NA	5	True	AATAAA	-12	NA	14864158	14915260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_14864438_14886533_14886683_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.5	chr4	+	7971	6	NIC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	162	84	intron_retention	FALSE	canonical	3	286	junction_3	18.004443895883	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTTTGTTCTATT	-30	True	NA	5	True	AATAAA	-12	NA	14864237	14915260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_14864438_14886533_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.6	chr4	+	2504	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	167	-332	167	332	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTCACATTGTATTC	-25	True	NA	NA	False	AATAAA	-37	NA	14864242	14915508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ES.22973.7	chr4	+	2201	6	NIC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	169	84	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	122.325140506766	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTTTGTTCTATT	-23	True	NA	5	True	AATAAA	-12	NA	14864244	14915260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14912431_14912523_14913723
ES.22973.8	chr4	+	1872	4	NIC	ENSMUSG00000028221.4	novel	2339	7	NA	NA	171	84	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	147.987236686892	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTTTGTTCTATT	-21	True	NA	5	True	AATAAA	-12	NA	14864246	14915260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_14864438_14902486_14902540_14912431_14912523_14913723
ES.22973.9	chr4	+	4495	1	Intergenic	novelGene_18871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGGGGATTTAGAGAA	5063	False	NA	NA	False	NA	NA	NA	14869450	14873945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_14869400_14873900
ES.22974.1	chr4	-	177	1	Intergenic	novelGene_18870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGACTTTGCTTC	NA	False	NA	NA	False	NA	NA	NA	14866346	14866169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14866200_14866300
ES.22975.1	chr4	-	3719	2	Antisense	novelGene_ENSMUSG00000028221.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGCTTTAATACTTTT	NA	False	NA	NA	False	TTTAAA	-12	NA	14893521	14888801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_14892497_14893497
ES.22976.1	chr4	+	178	1	Intergenic	novelGene_18872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7139	False	NA	NA	False	NA	NA	NA	14921592	14921770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_14921600_14921800
ES.22977.1	chr4	+	940	5	NIC	ENSMUSG00000086587.8	novel	876	6	NA	NA	-164	7	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	17.4928556845359	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGAATTTTTGTTGCCC	631	False	NA	13	True	TATAAA	-24	NA	14930496	14953037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14952620
ES.22977.2	chr4	+	898	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGGTACAGAATTTTT	-22	True	NA	6	True	TATAAA	-17	NA	14930638	14953030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
ES.22977.3	chr4	+	872	6	NNC	ENSMUSG00000086587.8	novel	876	6	NA	NA	-14	10800	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	22.2387049982682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGGAATTTGGCATAGA	-14	True	NA	NA	False	TATAAA	-12	NA	14930646	14963830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14963438
ES.22978.1	chr4	-	178	1	Intergenic	novelGene_18873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	14948161	14947983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_14948000_14948200
ES.22979.1	chr4	-	4869	13	FSM	ENSMUSG00000040536.16	ENSMUST00000041606.14	4922	13	52	1	52	-1	multi-exon	FALSE	canonical	2	6	junction_1	6.35249294896631	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAATTTGTATTTATTC	685	False	NA	NA	False	AATAAA	-23	NA	15149079	14952245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14955922_14957825_14957918_14960007_14960086_14965905_14966019_14975132_14975187_14978154_14978232_14989157_14989280_15004968_15005106_15052619_15052718_15065323_15065350_15111193_15111303_15140224_15140250_15148817
ES.22979.2	chr4	-	2194	13	FSM	ENSMUSG00000040536.16	ENSMUST00000041606.14	4922	13	44	2684	44	0	multi-exon	FALSE	canonical	2	6	junction_1	6.35249294896631	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAATTAAAACAAG	677	False	NA	NA	False	AATAGA	-21	NA	15149087	14954928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_14955922_14957825_14957918_14960007_14960086_14965905_14966019_14975132_14975187_14978154_14978232_14989157_14989280_15004968_15005106_15052619_15052718_15065323_15065350_15111193_15111303_15140224_15140250_15148817
ES.22979.3	chr4	-	1311	10	NNC	ENSMUSG00000040536.16	novel	4922	13	NA	NA	94272	-703	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	3.2659863237109	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGCTAGGTGAGAAC	NA	False	NA	NA	False	AATAAA	-24	NA	15054689	14955631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_14955922_14957825_14957918_14960007_14960086_14965905_14966019_14975132_14975187_14978154_14978232_14989157_14989280_15004968_15005106_15052619_15052718_15054439
ES.22979.4	chr4	-	3302	6	NNC	ENSMUSG00000040536.16	novel	510	3	NA	NA	-60	61348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.60232526704263	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTACAGCATCCCAATC	7	True	NA	NA	False	NA	NA	NA	15149021	15049613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15052454_15052619_15052718_15065323_15065350_15111193_15111303_15140224_15140250_15148817
ES.22979.5	chr4	-	3459	1	Intergenic	novelGene_18874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATGTGTCTTTGGCGTG	NA	False	NA	NA	False	TTTAAA	-6	NA	15119870	15116411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_15116400_15119900
ES.2298.1	chr10	+	1833	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	-59	0	-59	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601704	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.10	chr10	+	6742	11	FSM	ENSMUSG00000019794.14	ENSMUST00000165806.8	1775	11	24	-4991	16	4991	multi-exon	FALSE	canonical	3	353	junction_4	21.6323831327018	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAGAATTTCATAAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	7601787	7643905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.11	chr10	+	1438	9	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	135.591989070151	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTGTTTCAATTTAG	NA	False	NA	6	True	AATAAA	-15	NA	7601793	7638910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7601888_7614486_7614662_7617171_7617330_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.12	chr10	+	4448	8	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	30	0	22	0	intron_retention	FALSE	canonical	3	353	junction_4	24.5290331930909	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601793	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460
ES.2298.13	chr10	+	4180	10	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	57	0	intron_retention	FALSE	canonical	1	2	junction_5	170.702542525562	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601828	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7619790_7619931_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006
ES.2298.14	chr10	+	4477	11	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	68	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	187.152371077686	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTTCAATTTAGC	NA	False	NA	7	True	AATAAA	-16	NA	7601839	7638911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7614486_7614662_7617171_7617766_7618025_7619501_7619790_7619931_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006_7637134_7638553
ES.2298.15	chr10	+	1014	6	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	25543	1	2668	0	3prime_fragment	FALSE	canonical	3	381	junction_2	14.1985914794391	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGTTTCAATTTAGCA	NA	False	NA	8	True	AATAAA	-17	NA	7627306	7638912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.16	chr10	+	5716	4	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	28727	3	-5045	-2	3prime_fragment	FALSE	canonical	3	403	junction_3	8.2192186706253	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTGTTTCAATTTAG	1162	False	NA	6	True	AATAAA	-15	NA	7630490	7638910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.17	chr10	+	4683	1	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1307	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTTCAATTTAGC	4900	False	NA	7	True	AATAAA	-16	NA	7634228	7638911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7634200_7638900
ES.2298.18	chr10	+	5945	1	Genic_Genomic	ENSMUSG00000019794.14	novel	NA	NA	NA	NA	55	4082	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTATCTGGAACTGTA	7723	False	NA	NA	False	AATAAA	-19	NA	7637051	7642996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_7637100_7643000
ES.2298.2	chr10	+	1844	12	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	158.534924587769	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTGTTTCAATTTAG	NA	False	NA	6	True	AATAAA	-15	NA	7601767	7638910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7629244_7629322_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.3	chr10	+	2678	10	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	353	junction_4	22.572243416185	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601770	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006_7637134_7638553
ES.2298.4	chr10	+	1837	12	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.620171282268	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601770	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7610100_7610171_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.5	chr10	+	4588	10	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	128.854305705186	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTGTTTCAATTTAG	NA	False	NA	6	True	AATAAA	-15	NA	7601770	7638910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7614486_7614662_7617171_7617766_7618025_7619501_7624539_7624662_7627307_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ES.2298.6	chr10	+	3191	10	NNC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_5	169.491905921314	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601770	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7619790_7619931_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7637134_7638553
ES.2298.7	chr10	+	4098	9	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	353	junction_4	23.9321958875486	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601770	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006
ES.2298.9	chr10	+	3180	10	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	14	0	6	0	intron_retention	FALSE	canonical	3	353	junction_4	22.7813005405966	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601777	7638913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006
ES.22980.1	chr4	+	3440	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-156	1386	-156	-1386	multi-exon	FALSE	canonical	3	428	junction_2	4.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAGCAATGCTTTTTC	NA	False	NA	34	True	AATAAA	-45	NA	15265674	15285367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.10	chr4	+	3852	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	871	-53	-871	multi-exon	FALSE	canonical	3	428	junction_2	4.5	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATTGTTGGAATGTTC	3	True	NA	NA	False	NA	NA	NA	15265777	15285882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.11	chr4	+	4417	4	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	-47	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	203.915559866224	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTCTCTCTTCTCT	9	False	NA	12	True	AATAAA	-13	NA	15265783	15286747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15266750_15281006_15281163_15283158_15285853_15286146
ES.22980.12	chr4	+	4000	4	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	-26	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.915559866224	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTCTCTCTTCTC	1	True	NA	11	True	AATAAA	-12	NA	15265804	15286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15266016_15266704_15266750_15281006_15281163_15283158
ES.22980.13	chr4	+	3754	2	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	279	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTCTTCTCTTTCTT	-28	True	NA	17	True	AATAAA	-18	NA	15266109	15286752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15266270_15283158
ES.22980.14	chr4	+	4095	2	NIC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	413	-6	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTCTCTCTTCTCT	51	False	NA	12	True	AATAAA	-13	NA	15266243	15286747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_15266750_15283158
ES.22980.15	chr4	+	3907	1	Intergenic	novelGene_18875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCATGAACATAAAAATG	5819	False	NA	NA	False	ATTAAA	-35	NA	15275439	15279346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_15275400_15279300
ES.22980.16	chr4	+	7680	2	ISM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	10381	866	10381	-866	3prime_fragment	FALSE	canonical	3	428	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGGAATGTTCATTTT	6591	False	NA	NA	False	NA	NA	NA	15276211	15285887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_15281163_15283158
ES.22980.2	chr4	+	4771	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-96	-5	-96	5	multi-exon	FALSE	canonical	3	428	junction_2	4.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTCTTTCTTTCCCAT	NA	False	NA	23	True	AATAAA	-24	NA	15265734	15286758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.3	chr4	+	3028	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-76	1718	-76	-1718	multi-exon	FALSE	canonical	3	428	junction_2	4.5	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAACTTGGCAACATTT	NA	False	NA	NA	False	AATAAA	-25	NA	15265754	15285035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.4	chr4	+	4684	4	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	-75	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.915559866224	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTCTTCTCTTTCTT	NA	False	NA	17	True	AATAAA	-18	NA	15265755	15286752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15265933_15265992_15266750_15281006_15281163_15283158
ES.22980.5	chr4	+	4802	4	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	-58	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.761134898562	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTCTCTCTTCTC	-2	True	NA	11	True	AATAAA	-12	NA	15265772	15286746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15266750_15270567_15270649_15281006_15281163_15283158
ES.22980.6	chr4	+	4610	4	NNC	ENSMUSG00000043252.9	novel	4670	3	NA	NA	-55	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.915559866224	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTCTCTCTTCTCT	1	True	NA	12	True	AATAAA	-13	NA	15265775	15286747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15266130_15266238_15266750_15281006_15281163_15283158
ES.22980.7	chr4	+	4537	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-55	188	-55	-188	multi-exon	FALSE	canonical	3	428	junction_2	4.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGACTTTGCAACTAAG	1	True	NA	NA	False	AATAAA	-20	NA	15265775	15286565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.8	chr4	+	2134	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	2589	-53	-2589	multi-exon	FALSE	canonical	3	428	junction_2	4.5	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTGGGCTTACCAT	3	True	NA	NA	False	NA	NA	NA	15265777	15284164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22980.9	chr4	+	5187	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	-464	-53	464	multi-exon	FALSE	canonical	3	428	junction_2	4.5	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCAAGTGTAATGATGT	3	True	NA	NA	False	AATAAA	-13	NA	15265777	15287217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15266750_15281006_15281163_15283158
ES.22981.1	chr4	-	3635	1	Antisense	novelGene_ENSMUSG00000043252.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGAGCTCCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	15266366	15262731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_15262700_15266400
ES.22981.2	chr4	-	1025	2	Antisense	novelGene_ENSMUSG00000043252.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACCCCGCGCCCGCAGA	NA	False	NA	NA	False	NA	NA	NA	15281057	15265777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_15266745_15280999
ES.22982.1	chr4	+	3155	1	Intergenic	novelGene_18876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCATATCTTGTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	15301390	15304545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_15301400_15304500
ES.22983.1	chr4	-	605	1	Intergenic	novelGene_18877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	15306595	15305990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_15306000_15306600
ES.22984.1	chr4	-	3327	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	128	-496	-104	496	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGTTGTCCAAGTGAA	-6	True	NA	NA	False	NA	NA	NA	15945379	15916743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ES.22984.2	chr4	-	1190	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	102	1667	102	-1667	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGAGTGTCTGCTCT	NA	False	NA	-8	True	AATAAA	-36	NA	15945405	15918906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ES.22984.3	chr4	-	1294	11	NNC	ENSMUSG00000028223.9	novel	2959	10	NA	NA	-111	-1688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	71.9431025185876	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTAGTTCTGAGGAT	-13	True	NA	-29	True	AATAAA	-15	NA	15945386	15918927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931004_15931124_15931183_15932892_15933096_15944462_15944604_15945282
ES.22984.4	chr4	-	6234	10	NNC	ENSMUSG00000028223.9	novel	2959	10	NA	NA	4298	-1693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.1543295537999	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTTCTGTAGTTCTG	5182	False	NA	-34	True	AATAAA	-10	NA	15940191	15918932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15934998
ES.22985.1	chr4	-	175	1	Intergenic	novelGene_18878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGTCTGAAAAATTGTA	NA	False	NA	NA	False	NA	NA	NA	15946056	15945881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_15945900_15946100
ES.22986.1	chr4	+	2596	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	-5	-58	-5	58	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAATGTGTTTCTTAC	NA	False	NA	67	True	AATATA	-21	NA	15957919	15992647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.11	chr4	+	3901	12	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	19	4455	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	57.0541282793718	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGTTTCAGTATCATC	16	True	NA	NA	False	NA	NA	NA	15957985	15986009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953
ES.22986.12	chr4	+	2484	17	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.6083919431398	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTGTGTGGTAACG	37	True	NA	8	True	AATAAA	-14	NA	15958006	15992588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964113_15964189_15964287_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.13	chr4	+	176	1	Intergenic	novelGene_18879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAATAAATTT	1923	False	NA	NA	False	NA	NA	NA	15960506	15960682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_15960500_15960700
ES.22986.2	chr4	+	3531	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	4	-1002	4	1002	multi-exon	FALSE	canonical	3	165	junction_3	27.9629914152418	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTGGTCCATGTAAAT	-41	True	NA	NA	False	AATAAA	-21	NA	15957928	15993591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.4	chr4	+	2507	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	61.8436738882806	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTTTGTGTGGTAAC	-29	True	NA	7	True	AATAAA	-13	NA	15957940	15992587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986657_15989001_15989116_15991181_15991232_15992433
ES.22986.5	chr4	+	3429	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	-18	1002	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	53.2213825032341	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTGGTCCATGTAAAT	-21	True	NA	NA	False	AATAAA	-21	NA	15957948	15993591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.6	chr4	+	6010	10	NNC	ENSMUSG00000028224.15	novel	1752	11	NA	NA	-15	4455	intron_retention	FALSE	canonical	0	0	junction_8	81.4727099655817	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGTTTCAGTATCATC	-18	True	NA	NA	False	NA	NA	NA	15957951	15986009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15979140_15979414_15981306
ES.22986.7	chr4	+	2423	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	53.2213825032341	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTGTGTGGTAACG	-18	True	NA	8	True	AATAAA	-14	NA	15957951	15992588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.8	chr4	+	2350	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.9409185650787	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTGTGTGGTAACG	-6	True	NA	8	True	AATAAA	-14	NA	15957963	15992588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963819_15964287_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22986.9	chr4	+	2434	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	60.0220700150277	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTGTGTGGTAACG	12	True	NA	8	True	AATAAA	-14	NA	15957981	15992588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964287_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ES.22987.1	chr4	-	576	1	Antisense	novelGene_ENSMUSG00000028224.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTTTTTGCCAAGTAG	273	False	NA	NA	False	NA	NA	NA	15958158	15957582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_15957600_15958200
ES.22988.1	chr4	+	1373	1	Antisense	novelGene_ENSMUSG00000041153.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAACAAA	9463	False	NA	NA	False	AAAAAG	-20	NA	15998514	15999887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_15998500_15999900
ES.22989.1	chr4	+	176	1	Intergenic	novelGene_18880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	16010097	16010273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_16010100_16010300
ES.2299.1	chr10	-	5398	6	NIC	ENSMUSG00000040006.14	novel	1557	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	22	junction_3	119.766439372639	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7458	False	NA	-1	True	AATAAA	-17	NA	7656686	7643710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7655127_7656524
ES.2299.2	chr10	-	1516	8	NNC	ENSMUSG00000040006.14	novel	1525	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.563877556512	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7489	False	NA	-10	True	AATAAA	-8	NA	7656655	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649860_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ES.2299.3	chr10	-	1556	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	-31	0	-5	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7458	False	NA	-10	True	AATAAA	-8	NA	7656686	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ES.2299.4	chr10	-	3801	6	NIC	ENSMUSG00000040006.14	novel	1525	8	NA	NA	11	0	intron_retention	TRUE	canonical	3	314	junction_1	22.8997816583477	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7500	False	NA	-10	True	AATAAA	-8	NA	7656644	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7646285_7649061_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ES.2299.5	chr10	-	5040	1	NIC	ENSMUSG00000040006.14	novel	1557	8	NA	NA	-2444	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	NA	False	NA	-10	True	AATAAA	-8	NA	7648759	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7643700_7648800
ES.2299.7	chr10	-	2030	7	NIC	ENSMUSG00000040006.14	novel	1525	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	314	junction_2	22.1935926689564	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7500	False	NA	-10	True	AATAAA	-8	NA	7656644	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7644350_7646120_7646285_7649061_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ES.2299.9	chr10	-	1361	6	NIC	ENSMUSG00000040006.14	novel	1525	8	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	125.251746494809	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7496	False	NA	-10	True	AATAAA	-8	NA	7656648	7643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7656524
ES.22990.1	chr4	-	2692	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTGAACACTGAGTT	-8	True	NA	0	True	AATAAA	-21	NA	16013853	15997222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
ES.22990.10	chr4	-	1767	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	2	-687	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	1	True	NA	-4	True	ATTAAA	-17	NA	16013819	15997913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.11	chr4	-	1879	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	-14	793	-14	-687	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	NA	False	NA	-4	True	ATTAAA	-17	NA	16013902	15997913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.12	chr4	-	2139	7	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-20	-687	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	53.1583065527445	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	NA	False	NA	-4	True	ATTAAA	-17	NA	16013908	15997913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001357_16001470_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
ES.22990.13	chr4	-	1672	5	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-30	-688	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	51.6163733712472	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCAGTGTATTGGCTT	-6	True	NA	-5	True	ATTAAA	-16	NA	16013851	15997914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16013686
ES.22990.14	chr4	-	5225	5	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-27	-689	intron_retention	FALSE	canonical	3	111	junction_4	9.78199877325692	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCAGTGTATTGGCT	NA	False	NA	-6	True	ATTAAA	-15	NA	16013915	15997915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_15999001_16001929_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.2	chr4	-	2533	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGTGTGAACACTGAG	NA	False	NA	-2	True	AATAAA	-19	NA	16013896	15997224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.3	chr4	-	2598	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	-44	104	-44	2	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGTGTGAACACTGAG	NA	False	NA	-2	True	AATAAA	-19	NA	16013932	15997224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.4	chr4	-	2651	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	48.0524713204222	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	1	True	NA	-3	True	AATAAA	-18	NA	16013844	15997225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013515
ES.22990.5	chr4	-	4181	4	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	5410	105	-2073	1	3prime_fragment	FALSE	canonical	3	76	junction_2	24.4994331000173	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTTGTGTGAACACTGA	5410	False	NA	-3	True	AATAAA	-18	NA	16008478	15997225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356
ES.22990.6	chr4	-	2627	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.7518586025717	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTGTGTGAACACTG	-5	True	NA	-4	True	AATAAA	-17	NA	16013850	15997226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008676_16013493
ES.22990.7	chr4	-	4149	3	NNC	ENSMUSG00000041153.10	novel	1966	2	NA	NA	-2071	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	0.5	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTGTGTGAACACTG	9696	False	NA	-4	True	AATAAA	-17	NA	16004192	15997226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001357_16001470_16001929
ES.22990.8	chr4	-	2594	7	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.4046753639406	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACCCTTGTGTGAACA	-1	True	NA	-7	True	AATAAA	-14	NA	16013821	15997229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001357_16001470_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ES.22990.9	chr4	-	2060	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	-24	-687	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	NA	False	NA	-4	True	ATTAAA	-17	NA	16013912	15997913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
ES.22991.1	chr4	-	2342	1	Intergenic	novelGene_18881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCTGGGCACCTCTT	NA	False	NA	NA	False	TATAAA	-17	NA	16119139	16116797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_16116800_16119100
ES.22992.1	chr4	-	4664	12	Fusion	ENSMUSG00000081679.2_ENSMUSG00000041135.16	novel	2804	12	NA	NA	63	103	multi-exon	TRUE	non_canonical	0	0	junction_1	33.0921578185967	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAATACAACCCAAGACA	38	False	NA	NA	False	AGTAAA	-8	NA	16163580	16120655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_16122266_16122303_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.10	chr4	-	2196	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	-49	-614	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCAGTTTCACTACTTGA	NA	False	NA	11	True	AGTAAA	-33	NA	16163696	16123354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
ES.22992.11	chr4	-	2078	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-21	635	-21	-627	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCAGTTTTTACGTCAG	NA	False	NA	-2	True	AGTAAA	-20	NA	16163668	16123367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.12	chr4	-	1828	10	NIC	ENSMUSG00000041135.16	novel	2692	11	NA	NA	62	-634	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	36.2338086445365	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	37	False	NA	-9	True	AGTAAA	-13	NA	16163581	16123374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16158276_16158431_16163223
ES.22992.13	chr4	-	2060	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	77	-635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.8878865702522	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTAGTTCAGTTTT	52	False	NA	-10	True	AGTAAA	-12	NA	16163566	16123375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16154164_16154257_16155034_16155191_16158276_16158431_16163223
ES.22992.14	chr4	-	2096	12	FSM	ENSMUSG00000041135.16	ENSMUST00000183871.2	2804	12	73	635	73	-635	multi-exon	FALSE	canonical	0	0	junction_4	42.0395327525127	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTAGTTCAGTTTT	48	False	NA	-10	True	AGTAAA	-12	NA	16163570	16123375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16131522_16131647_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.15	chr4	-	1789	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	101	802	97	-794	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGTTTACAAATGGTT	72	False	NA	NA	False	AATAAA	-29	NA	16163546	16123534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.16	chr4	-	1178	6	ISM	ENSMUSG00000041135.16	ENSMUST00000183871.2	2804	12	2	15253	2	-15253	5prime_fragment	FALSE	canonical	3	77	junction_4	16.2061716639063	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTATCTTGAAACTATT	NA	False	NA	NA	False	AATAAA	-18	NA	16163641	16137993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.17	chr4	-	1091	7	NNC	ENSMUSG00000041135.16	novel	2692	11	NA	NA	166	-15253	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	35.1729852143501	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTATCTTGAAACTATT	141	False	NA	NA	False	AATAAA	-18	NA	16163477	16137993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
ES.22992.2	chr4	-	4086	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	12	1333	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATGAATCTTCAATAAG	NA	False	NA	NA	False	AATAAA	-25	NA	16163631	16121399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
ES.22992.3	chr4	-	3156	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	65	571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.0921578185967	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAGAAAAAT	40	False	NA	NA	False	NA	NA	NA	16163578	16122161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16122266_16122303_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.5	chr4	-	2702	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	-19	9	-19	-1	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTATCTTCTGGTA	NA	False	NA	-9	True	AATAAA	-18	NA	16163666	16122741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.6	chr4	-	2618	11	NIC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	25	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.0550725730385	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTTTTATCTTCTGG	0	True	NA	-11	True	AATAAA	-16	NA	16163618	16122743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16131522_16131647_16132776_16132863_16138073_16138236_16139204_16139255_16155034_16155191_16158276_16158431_16163223
ES.22992.7	chr4	-	2786	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTTTTATCTTCTGG	NA	False	NA	-11	True	AATAAA	-16	NA	16163675	16122743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
ES.22992.8	chr4	-	2587	11	NNC	ENSMUSG00000041135.16	novel	2692	11	NA	NA	67	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	33.8704886294839	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTCTTTTTATCTTC	42	False	NA	-14	True	AATAAA	-13	NA	16163576	16122746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138216_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22992.9	chr4	-	2104	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	70	518	66	-510	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTCTCTGCGGATTCC	41	False	NA	NA	False	NA	NA	NA	16163577	16123250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ES.22993.1	chr4	-	1422	2	Antisense	novelGene_ENSMUSG00000083725.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGGTGGTCGCGTCG	NA	False	NA	NA	False	NA	NA	NA	16249069	16246992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_16248235_16248889
ES.22994.1	chr4	+	129	1	Intergenic	novelGene_18882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGGAAGAGTGCATT	NA	False	NA	NA	False	NA	NA	NA	16250138	16250267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_16250100_16250300
ES.22995.1	chr4	+	159	1	Intergenic	novelGene_18883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	16850553	16850712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_16850600_16850700
ES.22996.1	chr4	+	178	1	Intergenic	novelGene_18884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTCATTG	NA	False	NA	NA	False	NA	NA	NA	18411978	18412156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_18412000_18412200
ES.22997.1	chr4	+	181	1	Intergenic	novelGene_18885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	18619880	18620061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_18619900_18620100
ES.22998.1	chr4	+	211	1	Intergenic	novelGene_18886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTTTGTAGATCT	NA	False	NA	NA	False	NA	NA	NA	19006331	19006542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_19006300_19006500
ES.22999.1	chr4	-	252	1	Intergenic	novelGene_18887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19156847	19156595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_19156600_19156800
ES.23.1	chr1	-	5802	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5178833	5173031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_5173000_5178800
ES.230.1	chr1	-	4285	1	FSM	ENSMUSG00000081402.5	ENSMUST00000117459.3	2557	1	-979	-749	-979	749	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAATATTAGGGCCTC	8856	False	NA	NA	False	AATAAA	-11	NA	33878740	33874455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33874500_33878700
ES.230.2	chr1	-	2604	1	FSM	ENSMUSG00000081402.5	ENSMUST00000117459.3	2557	1	149	-196	149	196	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAT	9984	False	NA	NA	False	AATAAA	-16	NA	33877612	33875008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33875000_33877600
ES.2300.1	chr10	+	231	1	Antisense	novelGene_ENSMUSG00000040006.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAAAAACCGGTAGTTT	329	False	NA	NA	False	AGTAAA	-33	NA	7667861	7668092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_7667900_7668100
ES.23000.1	chr4	-	156	1	Intergenic	novelGene_18888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	19489045	19488889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_19488900_19489000
ES.23001.1	chr4	-	5696	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-42	-6	-42	6	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTTGGTTTTCATTT	NA	False	NA	0	True	AATAAA	-21	NA	19570150	19519247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.13	chr4	-	5643	16	NNC	ENSMUSG00000028228.6	novel	5648	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.5347385922249	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATAGCTGTGTTTGGTT	-16	True	NA	-7	True	AATAAA	-14	NA	19570111	19519254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555368_19555502_19570000
ES.23001.14	chr4	-	5503	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	48	97	23	-97	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGAGCAGTATGTGCA	-3	True	NA	-103	True	NA	NA	NA	19570060	19519350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.15	chr4	-	5089	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-10	569	-10	-569	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATCATTTTATAAATTC	NA	False	NA	NA	False	AATAAA	-18	NA	19570118	19519822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.16	chr4	-	3516	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-4	2136	-4	-2136	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGCAAGTAAATTAAAA	-17	True	NA	NA	False	NA	NA	NA	19570112	19521389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.17	chr4	-	2682	15	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	14730	2735	-11700	-2735	3prime_fragment	FALSE	canonical	3	122	junction_5	16.0472834499316	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAAAC	NA	False	NA	NA	False	CATAAA	-18	NA	19555378	19521988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361
ES.23001.18	chr4	-	2807	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-3	2844	-3	-2844	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATAATTCTAGTTATT	-16	True	NA	NA	False	TTTAAA	-23	NA	19570111	19522097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.19	chr4	-	2128	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-3	3523	-3	-3523	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAGTGAGGTACTGAG	-16	True	NA	-14	True	AGTAAA	-14	NA	19570111	19522776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.20	chr4	-	4427	11	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	-3	9850	-3	-9850	5prime_fragment	FALSE	canonical	3	133	junction_6	13.7844114854425	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTAATTTATTTT	-16	True	NA	NA	False	NA	NA	NA	19570111	19529103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ES.23001.4	chr4	-	5344	1	Genic_Genomic	ENSMUSG00000028228.6	novel	NA	NA	NA	NA	19083	2	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTGTGTTTGGTTTTC	1992	False	NA	-4	True	AATAAA	-17	NA	19524595	19519251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_19519300_19524600
ES.23001.8	chr4	-	4398	4	NNC	ENSMUSG00000028228.6	novel	5648	16	NA	NA	15460	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.1681818002938	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATAGCTGTGTTTGGTT	NA	False	NA	-7	True	AATAAA	-14	NA	19528218	19519254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19523295_19525002_19525240_19526283_19526374_19528187
ES.23002.1	chr4	+	1197	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-140	677	-95	-677	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATGTAAAAAAT	-5	True	NA	58	True	NA	NA	NA	19575066	19606255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ES.23002.10	chr4	+	2829	8	Fusion	ENSMUSG00000028229.12_ENSMUSG00000078772.3	novel	554	5	NA	NA	261	-722	intron_retention	FALSE	canonical	0	0	junction_1	22.1221100960564	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTATGGCTTTTTTTCT	290	False	NA	13	True	TATAAA	-21	NA	19575467	19606210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_19575659_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19602674_19605402
ES.23002.11	chr4	+	4180	8	NIC	ENSMUSG00000028229.12	novel	1734	10	NA	NA	3087	-728	intron_retention	FALSE	canonical	3	39	junction_7	11.1024909872717	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACGACTGTATGGCTTT	2689	False	NA	7	True	TATAAA	-15	NA	19578293	19606204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19602674_19605402_19605537_19606084
ES.23002.12	chr4	+	157	1	Intergenic	novelGene_18889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	19600769	19600926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_19600800_19600900
ES.23002.2	chr4	+	708	1	Genic_Genomic	ENSMUSG00000028229.12	novel	NA	NA	NA	NA	-81	-22866	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGTAAGTTCTGTGT	9	True	NA	NA	False	NA	NA	NA	19575080	19575788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_19575100_19575800
ES.23002.3	chr4	+	1034	10	NNC	ENSMUSG00000028229.12	novel	1734	10	NA	NA	-76	-731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.8313880153983	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCACGACTGTATGGC	14	True	NA	4	True	TATAAA	-12	NA	19575085	19606201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_19575328_19580479_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ES.23002.4	chr4	+	3321	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-109	-1478	-64	1478	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTGGCATTGTTT	26	False	NA	NA	False	NA	NA	NA	19575097	19608410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ES.23002.5	chr4	+	2307	9	NIC	ENSMUSG00000028229.12	novel	1734	10	NA	NA	-53	-724	intron_retention	FALSE	canonical	3	39	junction_8	10.5089247784919	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACTGTATGGCTTTTTTT	37	False	NA	11	True	TATAAA	-19	NA	19575108	19606208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19602674_19605402_19605537_19606084
ES.23002.6	chr4	+	2274	6	ISM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-54	5676	-9	2602	5prime_fragment	FALSE	canonical	3	50	junction_4	6.89927532426414	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCCCCCCCCAAAAA	-25	True	NA	NA	False	NA	NA	NA	19575152	19601256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613
ES.23002.7	chr4	+	3278	8	NNC	ENSMUSG00000028229.12	novel	1734	10	NA	NA	-8	-724	intron_retention	FALSE	canonical	0	0	junction_1	22.1221100960564	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACTGTATGGCTTTTTTT	-24	True	NA	11	True	TATAAA	-19	NA	19575153	19606208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_19575796_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19602674_19605402
ES.23002.8	chr4	+	938	9	NIC	ENSMUSG00000028229.12	novel	1734	10	NA	NA	-8	-731	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.6198241582334	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCACGACTGTATGGC	-24	True	NA	4	True	TATAAA	-12	NA	19575153	19606201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_19575328_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ES.23002.9	chr4	+	1679	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-16	71	-16	-71	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTAGGTGTGTGTT	13	True	NA	NA	False	TATAAA	-8	NA	19575190	19606861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ES.23003.1	chr4	+	4729	2	Antisense	novelGene_ENSMUSG00000041058.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAGAATACCCAGAATAC	NA	False	NA	NA	False	NA	NA	NA	19688491	19693402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_19688509_19688690
ES.23004.1	chr4	+	8560	2	Antisense	novelGene_ENSMUSG00000041058.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAAATACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	19696602	19705211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_19700843_19700891
ES.23005.1	chr4	-	9435	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	17	-3012	17	3012	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCTAATATAGTTCTTT	-13	True	NA	NA	False	AATAAA	-22	NA	19708976	19605290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.10	chr4	-	6611	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-203	-5	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	40.8971440187318	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAAAAACTATTGCT	NA	False	NA	NA	False	NA	NA	NA	19709196	19608307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.12	chr4	-	6424	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-11	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	64.7995802455541	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGTGGTATATTCATG	172	False	NA	NA	False	NA	NA	NA	19709004	19608345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19674963_19675007_19678344_19678436_19687790_19687887_19708838
ES.23005.13	chr4	-	6832	6	NIC	ENSMUSG00000041058.16	novel	4832	23	NA	NA	48818	-44	intron_retention	FALSE	canonical	3	178	junction_3	16.5577776286554	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAAAGTGGTATATTCAT	7576	False	NA	NA	False	NA	NA	NA	19629630	19608346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19623223_19627632_19627774_19627871
ES.23005.14	chr4	-	6345	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-12	-91	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_21	39.9306473428897	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAATAGCCACAAATT	171	False	NA	NA	False	NA	NA	NA	19709005	19608393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.15	chr4	-	6147	24	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	10	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	66.402222842972	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAATAGCCACAAAT	-20	True	NA	NA	False	NA	NA	NA	19708983	19608394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618354_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650450_19661960_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.16	chr4	-	6541	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-196	95	-196	-95	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTTTAATAGCCACA	NA	False	NA	NA	False	NA	NA	NA	19709189	19608397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.18	chr4	-	5913	22	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-46	-183	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	46.272631896025	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTTGTCCACTT	137	False	NA	NA	False	NA	NA	NA	19709039	19608485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.19	chr4	-	6307	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-48	-192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.2627100390385	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATATACATTTTGTT	135	False	NA	NA	False	NA	NA	NA	19709041	19608494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638763_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.2	chr4	-	9335	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	11	3009	intron_retention	FALSE	canonical	1	1	junction_11	54.3943930934062	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAGGCTAATATAGTTC	-19	True	NA	NA	False	AATAAA	-19	NA	19708982	19605293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19640038_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.20	chr4	-	5838	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-30	632	-30	-632	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTTGTAGCATCCAT	1	True	NA	NA	False	AAGAAA	-23	NA	19709023	19608934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.21	chr4	-	5637	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	60	743	60	627	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTCTACATCTTTTTC	30	True	NA	NA	False	ATTAAA	-22	NA	19708933	19609045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.22	chr4	-	5709	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-156	887	-156	483	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACTTTTCTTAATGTGT	1	True	NA	NA	False	AATAAA	-18	NA	19709149	19609189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.23	chr4	-	5534	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-11	483	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	53.8755639310522	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACTTTTCTTAATGTGT	172	False	NA	NA	False	AATAAA	-18	NA	19709004	19609189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662030_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.24	chr4	-	5561	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-108	479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	56.1356357405882	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCCAACTTTTCTTAAT	75	False	NA	NA	False	AATAAA	-14	NA	19709101	19609193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627863_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659630_19659733_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.25	chr4	-	4682	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-156	1914	-156	-544	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGGCTTTCATTCAGTG	1	True	NA	NA	False	AATAAA	-17	NA	19709149	19610216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.26	chr4	-	4313	23	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	1	-544	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	60.0972524502253	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGGCTTTCATTCAGTG	-29	True	NA	NA	False	AATAAA	-17	NA	19708992	19610216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19672418_19672544_19673155_19673295_19678351_19678436_19687790_19687887_19708838
ES.23005.28	chr4	-	4450	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	60	-544	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_21	39.9306473428897	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGGCTTTCATTCAGTG	30	True	NA	NA	False	AATAAA	-17	NA	19708933	19610216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.29	chr4	-	4558	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-59	-544	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	40.8971440187318	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGGCTTTCATTCAGTG	124	False	NA	NA	False	AATAAA	-17	NA	19709052	19610216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.3	chr4	-	1543	2	NNC	ENSMUSG00000041058.16	novel	4832	23	NA	NA	68550	1358	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCAAGTATGGGACGTA	1152	False	NA	NA	False	TATAAA	-28	NA	19609898	19606944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19606952_19608362
ES.23005.30	chr4	-	4524	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	2	-544	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	70.5954786087608	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGGCTTTCATTCAGTG	-28	True	NA	NA	False	AATAAA	-17	NA	19708991	19610216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19674963_19675007_19678344_19678436_19687790_19687887_19708838
ES.23005.33	chr4	-	4438	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-24	2026	-24	-656	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTTTTTAATTCT	159	False	NA	NA	False	AATAAA	-30	NA	19709017	19610328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.34	chr4	-	4307	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	5	-671	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	44.1413252771394	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATTCTCAAGCTTAAAAG	-25	True	NA	NA	False	AATAAA	-41	NA	19708988	19610343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19640038_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.35	chr4	-	4330	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-120	2230	-120	-860	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCACTGCGAAGTTCATT	-2	True	NA	NA	False	TATAAA	-29	NA	19709113	19610532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.36	chr4	-	4027	24	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	36	-911	combination_of_known_splicesites	FALSE	canonical	2	4	junction_23	44.2718445434755	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCTTCCTAATTAATAT	6	True	NA	NA	False	ATTAAA	-35	NA	19708957	19610583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19708838
ES.23005.37	chr4	-	4155	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-12	-911	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_21	39.9306473428897	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCTTCCTAATTAATAT	171	False	NA	NA	False	ATTAAA	-35	NA	19709005	19610583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.39	chr4	-	4116	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-10	-921	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	52.1492083406408	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCAAACTGGGCTTCC	173	False	19709024	NA	False	ATTAAA	-25	NA	19709003	19610593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.4	chr4	-	5206	2	NIC	ENSMUSG00000041058.16	novel	4832	23	NA	NA	49606	485	intron_retention	FALSE	canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTACTGGAAAAATACCTC	8364	False	NA	NA	False	TATAAA	-36	NA	19628842	19607817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19627632
ES.23005.40	chr4	-	3965	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	55	-930	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	53.565869730641	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCTACTTTTAGCAAAC	25	True	NA	NA	False	ATTAAA	-16	NA	19708938	19610602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659630_19659733_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.41	chr4	-	4129	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-61	2372	-61	-1002	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACTGATTTTTCTTTTC	122	False	NA	NA	False	NA	NA	NA	19709054	19610674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.42	chr4	-	4031	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	11	-1021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	42.6697386589398	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGTTTTCTCCAAAT	-19	True	NA	NA	False	ATTAAA	-29	NA	19708982	19610693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622026_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.44	chr4	-	3307	24	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-28	-1695	combination_of_known_splicesites	FALSE	canonical	2	4	junction_23	44.2718445434755	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGCCTTGTTTC	3	True	NA	0	True	ATTAAA	-30	NA	19709021	19611367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19708838
ES.23005.45	chr4	-	3542	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-168	3066	-168	-1696	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGCTTTGCCTTGTTT	-11	True	NA	-1	True	ATTAAA	-29	NA	19709161	19611368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.46	chr4	-	3272	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-30	-1697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	54.4876646590767	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGCTTTGCCTTGTT	1	True	NA	-2	True	ATTAAA	-28	NA	19709023	19611369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659630_19659733_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.47	chr4	-	3402	26	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	388	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	56.6833449965684	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAATTTGCTTTGCCTT	571	False	NA	-5	True	ATTAAA	-25	NA	19708605	19611372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19707010_19707079_19708486
ES.23005.49	chr4	-	3271	24	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	20	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	58.2682993315776	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAATTTGCTTTGCCTT	-10	True	NA	-5	True	ATTAAA	-25	NA	19708973	19611372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662277_19672418_19672544_19673155_19673295_19678344_19678436_19708838
ES.23005.5	chr4	-	6978	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-79	-459	-79	459	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGATTCCCATCCATAAA	104	False	NA	NA	False	AATAAA	-20	NA	19709072	19607843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.50	chr4	-	7410	24	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	8	-1700	intron_retention	FALSE	canonical	3	155	junction_16	21.8427963061644	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAATTTGCTTTGCCTT	-22	True	NA	-5	True	ATTAAA	-25	NA	19708985	19611372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.51	chr4	-	2823	20	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	12	-1700	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	74.3478758822298	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAATTTGCTTTGCCTT	-18	True	NA	-5	True	ATTAAA	-25	NA	19708981	19611372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.52	chr4	-	3161	23	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-15	-1703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	56.9389443916003	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGAATTTGCTTTGC	168	False	NA	-8	True	ATTAAA	-22	NA	19709008	19611375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.53	chr4	-	1833	15	NNC	ENSMUSG00000041058.16	novel	4832	23	NA	NA	36667	-1704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	55.7719939227786	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTGAATTTGCTTTG	8653	False	NA	-9	True	ATTAAA	-21	NA	19641781	19611376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638763_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733
ES.23005.54	chr4	-	3017	7	ISM	ENSMUSG00000041058.16	ENSMUST00000035982.8	4832	23	48534	1704	48534	-1704	3prime_fragment	FALSE	canonical	3	178	junction_3	22.246722605064	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTGAATTTGCTTTG	7292	False	NA	-9	True	ATTAAA	-21	NA	19629914	19611376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871
ES.23005.55	chr4	-	4454	24	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	10	-1704	intron_retention	FALSE	canonical	1	2	junction_19	44.7829886011746	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTGAATTTGCTTTG	-20	True	NA	-9	True	ATTAAA	-21	NA	19708983	19611376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662257_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.56	chr4	-	3315	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-40	-1768	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_17	40.8971440187318	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACAGTGGCTCTAGTT	143	False	NA	-1	True	ATTAAA	-23	NA	19709033	19611440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.57	chr4	-	3309	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-24	-1769	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_21	39.9306473428897	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGACAGTGGCTCTAGT	159	False	NA	-2	True	ATTAAA	-22	NA	19709017	19611441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.58	chr4	-	3165	24	NIC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-31	-1776	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	44.2383559380981	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCATATATGACAGTGG	0	True	NA	-9	True	ATTAAA	-15	NA	19709024	19611448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.59	chr4	-	3310	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-50	3180	-50	-1810	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAGAGAATTTATTAAA	133	False	NA	-43	True	TTTAAA	-42	NA	19709043	19611482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.6	chr4	-	6569	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-120	-9	-120	9	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTGAACTTAGTTATT	-2	True	NA	NA	False	NA	NA	NA	19709113	19608293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.60	chr4	-	3144	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	66	-1823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	56.1151934021042	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTGACGCAAGCAAG	36	True	NA	-56	True	TTTAAA	-29	NA	19708927	19611495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627772_19627900_19628006_19631051_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.61	chr4	-	3199	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-46	-1887	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	53.8755639310522	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATTTTCTACTTTATT	137	False	NA	NA	False	TATAAA	-37	NA	19709039	19611559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650414_19659562_19659748_19661965_19662030_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.64	chr4	-	5003	17	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	16	24030	16	-22660	5prime_fragment	FALSE	canonical	3	155	junction_9	16.6695830781697	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	-14	True	NA	NA	False	NA	NA	NA	19708977	19632332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.65	chr4	-	1228	8	ISM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	-174	51202	-174	-49832	5prime_fragment	FALSE	canonical	3	170	junction_3	14.6747040438814	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCATTTGCTTTATTA	9	False	NA	NA	False	ATTAAA	-17	NA	19709167	19659504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.66	chr4	-	3088	1	Intergenic	novelGene_18890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTAGTTTCCTACA	NA	False	NA	NA	False	AAAAAG	-11	NA	19666822	19663734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_19663700_19666800
ES.23005.7	chr4	-	6889	8	ISM	ENSMUSG00000041058.16	ENSMUST00000035982.8	4832	23	44703	-1377	44703	7	3prime_fragment	FALSE	canonical	3	178	junction_3	22.3095111043314	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTGAACTTAGTTA	3461	False	NA	NA	False	NA	NA	NA	19633745	19608295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045
ES.23005.8	chr4	-	6430	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-10	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.9448822157747	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTGAACTTAGTTA	173	False	19709024	NA	False	NA	NA	NA	19709003	19608295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619106_19619177_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ES.23005.9	chr4	-	6432	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	44.1166186563144	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTGAACTTAGTTA	-22	True	NA	NA	False	NA	NA	NA	19708985	19608295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678351_19678436_19687790_19687887_19708838
ES.23006.1	chr4	-	6320	2	Intergenic	novelGene_18891	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAACTTGTACATGC	NA	False	NA	NA	False	NA	NA	NA	19750611	19744077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_19750317_19750530
ES.23007.1	chr4	-	159	1	Intergenic	novelGene_18892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	19850596	19850437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_19850400_19850600
ES.23008.1	chr4	-	2497	8	FSM	ENSMUSG00000028238.7	ENSMUST00000029900.6	2539	8	47	-5	47	5	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTTGTTTTCTGTGAGA	5	True	NA	NA	False	NA	NA	NA	19922558	19876835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_19878381_19880004_19880080_19881275_19881453_19887307_19887386_19888743_19888824_19890677_19890857_19910586_19910759_19922367
ES.23009.1	chr4	+	2792	6	NNC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.51819129634	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	124	False	NA	21	True	AATAAA	-17	NA	20008113	20030470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_20008347_20014630_20014785_20016210_20016248_20021191_20021386_20023784_20023896_20028407
ES.23009.10	chr4	+	3960	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-52	-855	19	855	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTATCTTAGTCACTG	386	False	NA	NA	False	ATTAAA	-21	NA	20008375	20031640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.23009.11	chr4	+	2351	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-51	753	20	-438	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACACCTCTGGCTTA	387	False	NA	NA	False	AATAAA	-24	NA	20008376	20030032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.23009.12	chr4	+	4484	1	NIC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	17551	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAAACCATGGTGTTTA	NA	False	NA	13	True	AATAAA	-9	NA	20025978	20030462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_20026000_20030500
ES.23009.2	chr4	+	2600	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	262	0	-88	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	279	False	NA	21	True	AATAAA	-17	NA	20008268	20030470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.23009.3	chr4	+	2144	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	265	453	-85	-453	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATGAACAGTAACAA	282	False	NA	NA	False	AATAAA	-9	NA	20008271	20030017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.23009.4	chr4	+	2389	4	NIC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	-79	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.1661358757205	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAAACCATGGTGTTTA	288	False	NA	13	True	AATAAA	-9	NA	20008277	20030462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_20008347_20014630_20014785_20023784_20023896_20028407
ES.23009.5	chr4	+	2401	5	NNC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	-60	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.2610597819685	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGGTGTTTATATTT	307	False	NA	18	True	AATAAA	-14	NA	20008296	20030467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_20008347_20014630_20014785_20021359_20021386_20023784_20023896_20028407
ES.23009.6	chr4	+	2810	6	NNC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	29.7926165349739	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	328	False	NA	21	True	AATAAA	-17	NA	20008317	20030470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20027673_20027933_20028407
ES.23009.7	chr4	+	651	4	NIC	ENSMUSG00000073988.14	novel	2862	5	NA	NA	-37	-1704	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.1661358757205	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGATATTCCTGTTTG	330	False	NA	NA	False	ATTAAA	-8	NA	20008319	20028766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_20008347_20014630_20014785_20023784_20023896_20028407
ES.23009.8	chr4	+	2839	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-101	315	-30	0	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	337	False	NA	21	True	AATAAA	-17	NA	20008326	20030470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.23009.9	chr4	+	3149	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	-52	-44	19	44	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACTGTGATCTTTACT	386	False	NA	NA	False	ATTAAA	-35	NA	20008375	20030829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ES.2301.1	chr10	-	1508	2	Genic_Genomic	ENSMUSG00000040006.14	novel	353	2	NA	NA	-1	1490	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGTGTGACTTTATGGT	NA	False	NA	NA	False	NA	NA	NA	7668587	7665693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_7667065_7668450
ES.2301.2	chr10	-	1025	1	FSM	ENSMUSG00000040006.14	ENSMUST00000188270.2	1405	1	410	-30	386	30	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAATGAAAGCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	7668178	7667153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7667200_7668200
ES.23010.1	chr4	-	2523	1	Intergenic	novelGene_18893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAATTCCTGGCAACA	NA	False	NA	NA	False	NA	NA	NA	20021103	20018580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_20018600_20021100
ES.23011.1	chr4	+	1328	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	-10	647	-10	-647	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATACTTTGTCTGTGA	18	False	NA	NA	False	AATACA	-9	NA	20042041	20066103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ES.23011.2	chr4	+	1868	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	89	8	89	-8	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTCTCCACTGTTTTT	3	True	NA	NA	False	AATAAA	-12	NA	20042140	20066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ES.23011.3	chr4	+	1283	10	NNC	ENSMUSG00000073987.5	novel	1965	9	NA	NA	113	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.0980988546371	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATACTTTGTCTGTGA	3	True	NA	NA	False	AATACA	-9	NA	20042164	20066103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057775_20057854_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ES.23012.1	chr4	-	192	1	Intergenic	novelGene_18894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATTTAATCTATT	NA	False	NA	NA	False	NA	NA	NA	21693023	21692831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_21692800_21693000
ES.23013.1	chr4	+	176	1	Intergenic	novelGene_18895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	21693914	21694090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21693900_21694100
ES.23014.1	chr4	+	177	1	Intergenic	novelGene_18896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATGTAAATG	NA	False	NA	NA	False	NA	NA	NA	21722321	21722498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21722300_21722500
ES.23015.1	chr4	-	178	1	Intergenic	novelGene_18897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21725182	21725004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_21725000_21725200
ES.23016.1	chr4	+	3503	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	-18	-1	-18	1	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTCTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	21727682	21750547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ES.23016.10	chr4	+	3770	1	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	0	-1059	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	21727754	21731524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21727800_21731500
ES.23016.11	chr4	+	3990	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	0	-2584	0	0	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-5	True	NA	NA	False	NA	NA	NA	21727754	21750546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ES.23016.12	chr4	+	3219	11	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	175.13880209708	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTTTCTTGTTTCTTT	7	True	NA	NA	False	NA	NA	NA	21727766	21750539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21727916_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ES.23016.13	chr4	+	1247	13	NNC	ENSMUSG00000028252.21	novel	1406	12	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	133.029732474444	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAATAAAAACATAAAACC	8	True	NA	-10	True	NA	NA	NA	21727767	21747940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747763_21747886
ES.23016.14	chr4	+	1992	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	43	1330	2	662	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTATTGTGTAGTTTT	9	True	NA	NA	False	AATAAA	-18	NA	21727768	21749216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.15	chr4	+	3285	11	NNC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.968410352049	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTCTTTTTAATTTT	10	True	NA	NA	False	NA	NA	NA	21727769	21750547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735473_21741939_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.16	chr4	+	1070	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	23	313	11	-313	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTTGTTATCATTACC	18	True	NA	NA	False	AATAAA	-21	NA	21727777	21747649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ES.23016.17	chr4	+	2191	11	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	23	-100	11	100	intron_retention	FALSE	canonical	3	397	junction_1	37.0060805814396	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTACTATCAGAGTATT	18	True	NA	112	True	AATAAA	-15	NA	21727777	21748062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655
ES.23016.18	chr4	+	4675	11	ISM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	52	0	11	0	intron_retention	FALSE	canonical	3	397	junction_1	37.0060805814396	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	18	True	NA	NA	False	NA	NA	NA	21727777	21750546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655
ES.23016.2	chr4	+	3401	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-35	-1	-10	1	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTCTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	21727690	21750547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.20	chr4	+	1990	12	NNC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	260	706	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	181.556038294853	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTACTAAGTGTTG	267	False	NA	NA	False	AATAAA	-6	NA	21728026	21749260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21728132_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735465_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.21	chr4	+	939	11	ISM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	2705	2202	2664	-210	3prime_fragment	FALSE	canonical	3	192	junction_10	84.0130942175087	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGATTTAGTGTGTAAT	2671	False	NA	NA	False	NA	NA	NA	21730430	21748344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.22	chr4	+	5223	7	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	8542	3	8530	-3	3prime_fragment	FALSE	canonical	3	256	junction_6	83.0194087079776	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTTAGTTTTCTGGAT	8537	False	NA	9	True	AATAAA	-11	NA	21736296	21747959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ES.23016.23	chr4	+	3123	2	NNC	ENSMUSG00000028252.21	novel	1211	6	NA	NA	9527	2723	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGTGATAGTTGCACTG	9534	False	NA	NA	False	NA	NA	NA	21737293	21741247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21739257_21740087
ES.23016.24	chr4	+	4098	3	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	17415	1	intron_retention	FALSE	canonical	3	29	junction_2	113.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTCTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	21745181	21750547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21746775_21747482_21747577_21748136
ES.23016.25	chr4	+	2498	1	NIC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	17680	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAACATAAAACCAACT	NA	False	NA	-6	True	NA	NA	NA	21745446	21747944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21745400_21747900
ES.23016.26	chr4	+	155	1	Intergenic	novelGene_18899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5037	False	NA	NA	False	NA	NA	NA	21754742	21754897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21754700_21754900
ES.23016.27	chr4	+	309	1	Intergenic	novelGene_18900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGGAATAAACCTATT	NA	False	NA	NA	False	NA	NA	NA	21764243	21764552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21764200_21764600
ES.23016.3	chr4	+	1430	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	-46	22	8	-22	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAATAAAAACATAAAACC	3	True	NA	-10	True	NA	NA	NA	21727708	21747940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ES.23016.4	chr4	+	3274	10	NNC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	150.976410552145	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	3	True	NA	NA	False	NA	NA	NA	21727708	21750546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21742628_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.5	chr4	+	2159	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	-17	1223	8	769	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTAACTAATGTCTTG	3	True	NA	NA	False	AATAAA	-16	NA	21727708	21749323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.6	chr4	+	2173	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	10	1301	10	691	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATCATGAAAAA	5	True	NA	NA	False	AATAAA	-43	NA	21727710	21749245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ES.23016.7	chr4	+	2028	10	NNC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	6	769	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	150.976410552145	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTAACTAATGTCTTG	-28	True	NA	NA	False	AATAAA	-16	NA	21727731	21749323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21742628_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ES.23016.8	chr4	+	3341	13	NNC	ENSMUSG00000028252.21	novel	3484	13	NA	NA	1	8906	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	139.459347919823	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATGACCAAGTCAGATA	-18	True	NA	NA	False	ATTAAA	-7	NA	21727741	21768828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136_21750521_21768810
ES.23016.9	chr4	+	3250	11	NIC	ENSMUSG00000028252.21	novel	3365	12	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	150.97933633448	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTTTCTTGTTTCTTT	-6	True	NA	NA	False	NA	NA	NA	21727753	21750539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746655_21746775_21748136
ES.23017.1	chr4	-	204	1	Intergenic	novelGene_18898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTGCGCCATCTCTC	NA	False	NA	NA	False	NA	NA	NA	21753264	21753060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_21753100_21753300
ES.23018.1	chr4	-	2772	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	30	-1214	30	1214	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	21767182	21756167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ES.23018.10	chr4	-	756	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	16	816	16	-816	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACAGTTCATTTTGTT	-1	True	NA	NA	False	NA	NA	NA	21767196	21758197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ES.23018.11	chr4	-	594	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	75	-818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.478974301211	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTACAGTTCATTTTG	-9	True	NA	NA	False	NA	NA	NA	21767137	21758199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758476_21759369_21759425_21759618_21759794_21767049
ES.23018.2	chr4	-	1813	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	14	-239	14	239	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGCAGTCTGATTTCT	-3	True	NA	NA	False	AATACA	-22	NA	21767198	21757142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ES.23018.3	chr4	-	1581	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	9	-2	9	2	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATGTATTTCTTTAAAG	-8	True	NA	2	True	AATAAA	-26	NA	21767203	21757379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ES.23018.4	chr4	-	1442	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.478974301211	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGCATGTATTTCTTTA	5245	False	NA	-1	True	AATAAA	-23	NA	21767168	21757382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758476_21759369_21759425_21759618_21759794_21767049
ES.23018.5	chr4	-	1407	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	81	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.478974301211	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATGCATGTATTTCTT	-3	True	NA	-3	True	AATAAA	-21	NA	21767131	21757384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758476_21759369_21759433_21759622_21759794_21767049
ES.23018.6	chr4	-	1503	5	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.853638985098	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATGCATGTATTTCTT	14	True	NA	-3	True	AATAAA	-21	NA	21767181	21757384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758189_21758239_21758476_21759369_21759530_21759622_21759794_21767049
ES.23018.7	chr4	-	1224	2	NIC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	30	-3	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATGCATGTATTTCTT	13	True	NA	-3	True	AATAAA	-21	NA	21767182	21757384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_21758476_21767049
ES.23018.8	chr4	-	1356	3	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	7434	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGCATGCATGTATTT	7417	False	NA	-6	True	AATAAA	-18	NA	21759778	21757387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758476_21759369_21759512_21759652
ES.23018.9	chr4	-	1488	4	NNC	ENSMUSG00000028251.6	novel	1588	4	NA	NA	82	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.750588294203	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCCTCCAGCATGCAT	-2	True	NA	-12	True	AATAAA	-12	NA	21767130	21757393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_21758470_21759369_21759530_21759622_21759794_21767049
ES.23019.1	chr4	+	366	1	Intergenic	novelGene_18901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAAAATA	3562	False	NA	NA	False	NA	NA	NA	21770740	21771106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21770700_21771100
ES.2302.1	chr10	+	1752	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	-15	1734	-15	-1734	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGTAACGTTCATATT	1107	False	NA	NA	False	NA	NA	NA	7668639	7697165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.10	chr10	+	3557	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	2	-434	intron_retention	FALSE	canonical	3	182	junction_11	34.8541233910046	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGACCCAAATCTCCT	1141	False	NA	NA	False	NA	NA	NA	7668673	7698465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.11	chr10	+	2845	13	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	3	-573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.0041485173941	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1142	False	NA	9	True	AGTAAA	-14	NA	7668674	7698326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673607_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.12	chr10	+	3023	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	20	428	3	-428	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAAATCTCCTTTATTC	1142	False	NA	NA	False	NA	NA	NA	7668674	7698471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.13	chr10	+	6430	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	182	junction_11	34.8427399744282	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCATGTGTTCTCTCT	1142	False	NA	14	True	NA	NA	NA	7668674	7698899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7686223_7690427_7690576_7696715
ES.2302.14	chr10	+	3340	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	22	109	5	-109	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTGTTTCTGTGCCTG	1144	False	NA	-95	True	NA	NA	NA	7668676	7698790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.15	chr10	+	4224	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	5	-1473	intron_retention	FALSE	canonical	3	182	junction_11	33.6378378055339	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCTGTGACTTTCTTT	1144	False	NA	NA	False	NA	NA	NA	7668676	7697426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.16	chr10	+	3087	11	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	-2	-111	combination_of_known_splicesites	FALSE	canonical	1	7	junction_10	80.7289291394355	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTGTGTTTCTGTGCC	1150	False	NA	-97	True	NA	NA	NA	7668682	7698788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7696715
ES.2302.17	chr10	+	6221	10	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	-1	-1734	intron_retention	FALSE	canonical	3	182	junction_9	38.5082963644055	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGTAACGTTCATATT	1151	False	NA	NA	False	NA	NA	NA	7668683	7697165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7686223_7690427_7690576_7696715
ES.2302.18	chr10	+	2948	14	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	-1	-573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.1500306935305	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1151	False	NA	9	True	AGTAAA	-14	NA	7668683	7698326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7691879_7691959_7696715
ES.2302.19	chr10	+	8516	12	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	1	-1734	intron_retention	FALSE	canonical	0	0	junction_3	118.730474688829	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGTAACGTTCATATT	1153	False	NA	NA	False	NA	NA	NA	7668685	7697165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7671407_7671476_7671560_7671626_7671940_7672076_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683038_7683147_7686125_7686223_7690427
ES.2302.2	chr10	+	3484	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	-12	-1	-12	1	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATGTGTTCTCTCTG	1110	False	NA	15	True	NA	NA	NA	7668642	7698900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.20	chr10	+	3551	13	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	2	-573	intron_retention	FALSE	canonical	3	3	junction_7	94.9912276651551	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1154	False	NA	9	True	AGTAAA	-14	NA	7668686	7698326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7677824_7677971_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.21	chr10	+	3950	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	2	-573	intron_retention	FALSE	canonical	3	182	junction_11	33.9547584269821	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	1154	False	NA	9	True	AGTAAA	-14	NA	7668686	7698326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.22	chr10	+	4572	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	34	-1135	4	1135	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGATTGCTCATTAATA	1156	False	NA	NA	False	ATTAAA	-15	NA	7668688	7700034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.23	chr10	+	1941	11	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	38	11837	8	-1576	5prime_fragment	FALSE	canonical	3	222	junction_9	28.5077182531328	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATTGCAAAGGTCATTT	1160	False	NA	NA	False	TATAAA	-12	NA	7668692	7687062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125
ES.2302.24	chr10	+	4395	11	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	8	-572	intron_retention	FALSE	canonical	3	182	junction_10	36.548734588218	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTACTTTTTTCTT	1160	False	NA	10	True	AGTAAA	-15	NA	7668692	7698327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.25	chr10	+	3078	14	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	8	-572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.055755842482	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTTACTTTTTTCTT	1160	False	NA	10	True	AGTAAA	-15	NA	7668692	7698327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7670544_7670762_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.26	chr10	+	6034	9	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	16	2217	intron_retention	FALSE	canonical	3	222	junction_7	31.3964070396598	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCAATTGCTGCTT	1168	False	NA	NA	False	ATTAAA	-26	NA	7668700	7690855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7686223_7690427
ES.2302.27	chr10	+	3524	14	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	97	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.055755842482	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATATCAGCTTACTTTT	1249	False	NA	5	True	AGTAAA	-10	NA	7668781	7698322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7669475_7670101_7670169_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.28	chr10	+	3097	9	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	5517	0	-1158	0	3prime_fragment	FALSE	canonical	3	182	junction_8	26.0333319995732	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCATGTGTTCTCTCT	6639	False	NA	14	True	NA	NA	NA	7674171	7698899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.29	chr10	+	2037	5	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	12063	573	5388	-573	3prime_fragment	FALSE	canonical	3	182	junction_4	27.6620227026152	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCTTACTTTTTTCT	NA	False	NA	9	True	AGTAAA	-14	NA	7680717	7698326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.3	chr10	+	1561	12	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	1	8049	1	2212	5prime_fragment	FALSE	canonical	3	222	junction_9	27.2533264328025	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGCTTCTCAATTGC	1123	False	NA	NA	False	ATTAAA	-21	NA	7668655	7690850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427
ES.2302.30	chr10	+	4120	1	Genic_Genomic	ENSMUSG00000015757.11	novel	NA	NA	NA	NA	20545	1095	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGCAAGTACATTTTGC	4573	False	NA	NA	False	NA	NA	NA	7695874	7699994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_7695900_7700000
ES.2302.31	chr10	+	4165	1	Genic_Genomic	ENSMUSG00000015757.11	novel	NA	NA	NA	NA	22182	2777	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAATAATAATAAAAA	6210	False	NA	NA	False	NA	NA	NA	7697511	7701676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_7697500_7701700
ES.2302.4	chr10	+	3436	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	3	-571	intron_retention	FALSE	canonical	3	182	junction_11	34.8541233910046	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTTACTTTTTTCTTT	1125	False	NA	11	True	AGTAAA	-16	NA	7668657	7698328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.5	chr10	+	3036	14	NNC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	6	-575	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_8	91.7673931081723	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCAGCTTACTTTTTT	1128	False	NA	7	True	AGTAAA	-12	NA	7668660	7698324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7677824_7677971_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.6	chr10	+	3680	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	8	-217	8	217	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCTGTGGGGTTTTTTT	1130	False	NA	NA	False	NA	NA	NA	7668662	7699116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.2302.7	chr10	+	2893	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	10	568	-7	-568	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTACTTTTTTCTTTCTT	1132	False	NA	14	True	AGTAAA	-19	NA	7668664	7698331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ES.23020.1	chr4	+	5884	17	FSM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	-24	1	-13	1	multi-exon	FALSE	canonical	3	5	junction_12	7.05226027596827	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTTCCCTGGCTTGC	9069	False	NA	4	True	AATAAA	-17	NA	21776247	21837871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.10	chr4	+	5258	6	NNC	ENSMUSG00000040455.18	novel	592	5	NA	NA	-4	5019	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.5689238911837	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGCAAGACCCAGCCAG	-3	True	NA	NA	False	NA	NA	NA	21776276	21789859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21786741_21787077
ES.23020.11	chr4	+	2304	18	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-4	-3237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.72986837222362	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAGTTAATTAATG	-3	True	NA	NA	False	NA	NA	NA	21776276	21834633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824873_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.12	chr4	+	5598	18	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	8.81529027091869	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTAGTTCCCTGGCTT	-3	True	NA	2	True	AATAAA	-15	NA	21776276	21837869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.13	chr4	+	5468	18	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-1	-70	intron_retention	FALSE	canonical	0	0	junction_13	7.72986837222362	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTAGGCCTAGAGTT	0	True	NA	8	True	AATAAA	-18	NA	21776279	21837800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824873_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.14	chr4	+	5588	19	NNC	ENSMUSG00000040455.18	novel	3977	19	NA	NA	-1	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	9.19087711930816	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTAGGCCTAGAGTT	0	True	NA	8	True	AATAAA	-18	NA	21776279	21837800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834461_21834797
ES.23020.15	chr4	+	4622	19	NNC	ENSMUSG00000040455.18	novel	3977	19	NA	NA	-1	-1118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	9.19087711930816	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGAGGAGATTCTGGAA	0	True	NA	6	True	AATAAA	-19	NA	21776279	21836752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.16	chr4	+	4501	19	NNC	ENSMUSG00000040455.18	novel	3977	19	NA	NA	8	-1121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	9.19087711930816	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTCTGAGGAGATTCTG	9	True	NA	3	True	AATAAA	-16	NA	21776288	21836749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834431_21834794
ES.23020.17	chr4	+	5206	19	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	10.4668789787384	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTAGTTCCCTGGCTTG	9	True	NA	3	True	AATAAA	-16	NA	21776288	21837870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798672_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824873_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.19	chr4	+	2458	8	ISM	ENSMUSG00000040455.18	ENSMUST00000108232.9	3977	19	-5	37562	-5	1649	5prime_fragment	FALSE	canonical	3	17	junction_5	4.80221037542046	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATTGTTGAAGAAT	13	True	NA	NA	False	AATAAA	-16	NA	21776292	21800310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604
ES.23020.2	chr4	+	6028	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-24	-1	-13	1	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTTCCCTGGCTTGC	9069	False	NA	4	True	AATAAA	-17	NA	21776247	21837871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.20	chr4	+	5386	18	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-5	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.94726579949551	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTAGGCCTAGAGTT	13	True	NA	8	True	AATAAA	-18	NA	21776292	21837800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781816_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834499_21834799
ES.23020.21	chr4	+	4715	17	FSM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	24	1122	-2	-1120	multi-exon	FALSE	canonical	3	5	junction_12	7.05226027596827	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTGAGGAGATTCTGG	16	True	NA	4	True	AATAAA	-17	NA	21776295	21836750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.22	chr4	+	5354	16	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	1143	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	9.62958404547615	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTAGGCCTAGAGTTTT	6600	False	NA	10	True	AATAAA	-20	NA	21782879	21837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.23	chr4	+	3047	11	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-32	-70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.93084542470644	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTAGGCCTAGAGTT	8412	False	NA	8	True	AATAAA	-18	NA	21784691	21837800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21824503_21835774
ES.23020.24	chr4	+	5025	10	NIC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	13923	-75	intron_retention	FALSE	canonical	0	0	junction_1	11.8039541397505	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATTGATTAGGCCTA	NA	False	NA	3	True	AATAAA	-13	NA	21798646	21837795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21798736_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.25	chr4	+	4458	7	NNC	ENSMUSG00000040455.18	novel	5541	13	NA	NA	32776	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.0118997046558	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTAGGCCTAGAGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	21817499	21837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.26	chr4	+	3893	6	NNC	ENSMUSG00000040455.18	novel	5541	13	NA	NA	40108	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	12.5634390196315	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGATTAGGCCTAGAG	NA	False	NA	6	True	AATAAA	-16	NA	21824831	21837798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834546_21834801
ES.23020.27	chr4	+	4885	3	NNC	ENSMUSG00000040455.18	novel	5541	13	NA	NA	46090	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTAGTTCCCTGGCTTG	NA	False	NA	3	True	AATAAA	-16	NA	21830813	21837870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21832318_21834234_21834541_21834795
ES.23020.28	chr4	+	888	1	ISM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	59065	1646	50613	-1646	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGTTGTGTCCTCTAA	NA	False	NA	NA	False	AATATA	-13	NA	21835336	21836224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21835300_21836200
ES.23020.3	chr4	+	5178	18	NNC	ENSMUSG00000040455.18	novel	5861	17	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	9.44626031348039	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTGGCTTGCTATAAA	9069	False	NA	10	True	AATAAA	-23	NA	21776247	21837877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824873_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.4	chr4	+	5769	19	NNC	ENSMUSG00000040455.18	novel	3977	19	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	9.19087711930816	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCTGGCTTGCTATAA	9078	False	NA	9	True	AATAAA	-22	NA	21776256	21837876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234_21834541_21834795
ES.23020.5	chr4	+	2661	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	-3	3345	-3	-3345	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGTTGTGCATGCCT	-11	True	NA	NA	False	NA	NA	NA	21776268	21834525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.6	chr4	+	2736	18	NNC	ENSMUSG00000040455.18	novel	6003	18	NA	NA	-3	-3228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.45724306374654	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATTAATGCTTTCAAAT	-11	True	NA	NA	False	NA	NA	NA	21776268	21834642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797336_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.7	chr4	+	2793	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	1	3209	1	-3209	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATATTCTTTTTTTTTCT	-7	True	NA	NA	False	NA	NA	NA	21776272	21834661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23020.8	chr4	+	943	1	NIC	ENSMUSG00000040455.18	novel	592	5	NA	NA	-4	-5257	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-3	True	NA	NA	False	AAGAAA	-30	NA	21776276	21777219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21776300_21777200
ES.23020.9	chr4	+	4883	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	5	1115	-4	-1115	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGAGATTCTGGAATGT	-3	True	NA	9	True	AATAAA	-22	NA	21776276	21836755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ES.23021.1	chr4	+	4606	10	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_1	145.833830686983	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	0	True	NA	10	True	AATAAA	-22	NA	21847577	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21847650_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585_21874673_21874912
ES.23021.10	chr4	+	3381	11	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_1	139.12569856069	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	439	False	NA	13	True	AATAAA	-25	NA	21848016	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.11	chr4	+	4123	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	437	-15	-28	15	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATTTTTAGACATACAA	442	False	NA	33	True	AATAAA	-33	NA	21848019	21876490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.12	chr4	+	4889	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	450	False	NA	13	True	AATAAA	-25	NA	21848027	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.13	chr4	+	2819	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	127.345498676074	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	454	False	NA	13	True	AATAAA	-25	NA	21848031	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.14	chr4	+	3890	13	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	167.546573127196	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGCTATGATACAT	460	False	NA	15	True	AATAAA	-15	NA	21848037	21876472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870250_21870406_21871437_21871609_21873585_21874231_21874528_21874673_21874912
ES.23021.15	chr4	+	4633	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	306	junction_9	53.9494505057887	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-18	True	NA	10	True	AATAAA	-22	NA	21848040	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585_21874673_21874912
ES.23021.16	chr4	+	6344	9	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	151.945251242018	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-18	True	NA	18	True	AATAAA	-18	NA	21848040	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.17	chr4	+	2878	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	458	1209	-7	10	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTATGATTTTAATC	-18	True	NA	23	True	AATAAA	-35	NA	21848040	21875266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.18	chr4	+	6093	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-16	True	NA	18	True	AATAAA	-18	NA	21848042	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.19	chr4	+	5553	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	429	junction_1	28.620086914613	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-15	True	NA	10	True	AATAAA	-22	NA	21848043	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.20	chr4	+	3632	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	131.535873245336	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	-13	True	NA	10	True	AATAAA	-10	NA	21848045	21876467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874231_21874912
ES.23021.21	chr4	+	3163	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_8	172.883278830469	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-13	True	NA	10	True	AATAAA	-22	NA	21848045	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21866104_21866168_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.23	chr4	+	5320	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	173.280549284478	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-13	True	NA	18	True	AATAAA	-18	NA	21848045	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21858612_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.24	chr4	+	3053	11	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.170031150023	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-11	True	NA	10	True	AATAAA	-22	NA	21848047	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21871437_21871609_21873585_21874673_21874912
ES.23021.25	chr4	+	3043	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	131.149380478903	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.26	chr4	+	6575	8	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	-9	intron_retention	FALSE	canonical	3	429	junction_1	30.2013650184821	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAAACTCTTGCACCT	-11	True	NA	4	True	AATAAA	-16	NA	21848047	21875247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.27	chr4	+	3505	13	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	129.714081947781	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTGTTTACAGTGC	-11	True	NA	2	True	AATAAA	-25	NA	21848047	21876198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874231_21874528_21874673_21874912
ES.23021.28	chr4	+	4130	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	310	junction_8	52.9255241930688	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-11	True	NA	10	True	AATAAA	-22	NA	21848047	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21871609_21873585
ES.23021.29	chr4	+	4320	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	465	0	0	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-11	True	NA	18	True	AATAAA	-18	NA	21848047	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.3	chr4	+	2854	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	133.143680546324	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	439	False	NA	10	True	AATAAA	-22	NA	21848016	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874638_21874912
ES.23021.30	chr4	+	5115	9	NNC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_1	151.945251242018	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-11	True	NA	10	True	AATAAA	-22	NA	21848047	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.31	chr4	+	4213	11	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	173.800345224053	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	-11	True	NA	18	True	AATAAA	-18	NA	21848047	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869564_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.32	chr4	+	3779	10	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	135.37027410444	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.33	chr4	+	7793	8	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	429	junction_1	30.2013650184821	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATTCTGCTGGCTAT	-11	True	NA	8	True	AATAAA	-8	NA	21848047	21876465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.34	chr4	+	3989	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-265	intron_retention	FALSE	canonical	3	26	junction_4	131.149380478903	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTACAGTGCATTT	-11	True	NA	6	True	AATAAA	-29	NA	21848047	21876202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.35	chr4	+	4056	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.790256410248	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTACAGTGCATTT	-11	True	NA	6	True	AATAAA	-29	NA	21848047	21876202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.36	chr4	+	8096	7	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	429	junction_1	32.5768322585239	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.37	chr4	+	4007	17	Fusion	ENSMUSG00000028247.3_ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-1398	intron_retention	FALSE	canonical	0	0	junction_11	115.333466928511	784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGTCACCTA	-11	True	NA	18	True	AATAAA	-20	NA	21848047	21910764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21875034_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ES.23021.38	chr4	+	4329	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	133.837943204916	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTGCACCTTAATTTT	-11	True	NA	11	True	AATAAA	-23	NA	21848047	21875254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.4	chr4	+	3868	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	439	False	NA	13	True	AATAAA	-25	NA	21848016	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.40	chr4	+	3110	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.790256410248	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.43	chr4	+	3105	11	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	136.914170194323	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-5	True	NA	10	True	AATAAA	-22	NA	21848053	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870338_21870406_21871437_21871609_21873585
ES.23021.44	chr4	+	3822	10	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_8	143.704515079802	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-5	True	NA	10	True	AATAAA	-22	NA	21848053	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870400_21871437_21871609_21873585
ES.23021.45	chr4	+	6762	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	429	junction_1	28.620086914613	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGCTATGATACAT	-5	True	NA	15	True	AATAAA	-15	NA	21848053	21876472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.46	chr4	+	5809	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-1	-265	intron_retention	FALSE	canonical	3	402	junction_3	32.8785644455472	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTACAGTGCATTT	-5	True	NA	6	True	AATAAA	-29	NA	21848053	21876202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.47	chr4	+	5338	10	NNC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	143.704515079802	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGCTATGATACAT	-4	True	NA	15	True	AATAAA	-15	NA	21848054	21876472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870355_21871609_21873585
ES.23021.48	chr4	+	4803	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	26	junction_4	142.782997499702	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-3	True	NA	13	True	AATAAA	-25	NA	21848055	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.49	chr4	+	2047	13	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	129.714081947781	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	-1	True	NA	10	True	AATAAA	-22	NA	21848057	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21873728_21874528_21874673_21874912
ES.23021.5	chr4	+	5087	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	439	False	NA	18	True	AATAAA	-18	NA	21848016	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.51	chr4	+	6067	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-11	intron_retention	FALSE	canonical	3	306	junction_9	65.4524613086324	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTAAACTCTTGCAC	-1	True	NA	2	True	AATAAA	-14	NA	21848057	21875245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.52	chr4	+	3950	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	172.165153268598	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	-1	True	NA	10	True	AATAAA	-10	NA	21848057	21876467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21871437_21871609_21873585_21874673_21874912
ES.23021.53	chr4	+	2808	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	131.000599329901	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874630_21874912
ES.23021.54	chr4	+	7049	8	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	-5	intron_retention	FALSE	canonical	3	429	junction_1	30.5841095195208	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTCTTGCACCTTAAT	-1	True	NA	8	True	AATAAA	-20	NA	21848057	21875251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.55	chr4	+	3032	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	8569	intron_retention	FALSE	non_canonical	0	0	junction_11	167.910296791457	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCATAGTCTCACTATG	0	True	NA	NA	False	NA	NA	NA	21848058	21885044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21875232_21885019
ES.23021.56	chr4	+	4440	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	-371	1	371	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTGAATTGTTTGATCA	0	True	NA	NA	False	AATACA	-19	NA	21848058	21876846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.58	chr4	+	3738	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-269	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	136.523294715591	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTGTTTACAGTGC	0	True	NA	2	True	AATAAA	-25	NA	21848058	21876198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21871437_21871609_21873585_21874673_21874912
ES.23021.59	chr4	+	4983	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	4	intron_retention	FALSE	canonical	3	26	junction_4	135.37027410444	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCTGGCTATGATACA	0	True	NA	14	True	AATAAA	-14	NA	21848058	21876471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.6	chr4	+	3839	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	434	272	-31	-264	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTTACAGTGCATTTA	439	False	NA	7	True	AATAAA	-30	NA	21848016	21876203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.60	chr4	+	5805	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	-1736	1	1736	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAATGGGTGTTGAGTT	0	True	NA	NA	False	ATTAAA	-21	NA	21848058	21878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.61	chr4	+	4502	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_3	174.204936784237	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	0	True	NA	13	True	AATAAA	-25	NA	21848058	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.62	chr4	+	5296	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_3	142.467930114504	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	0	True	NA	13	True	AATAAA	-25	NA	21848058	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.63	chr4	+	3738	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-265	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	127.345498676074	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTTACAGTGCATTT	0	True	NA	6	True	AATAAA	-29	NA	21848058	21876202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.64	chr4	+	6367	8	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	402	junction_3	35.1341452616298	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	0	True	NA	10	True	AATAAA	-22	NA	21848058	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.65	chr4	+	9301	7	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	429	junction_1	32.5768322585239	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGCTATGATACAT	0	True	NA	15	True	AATAAA	-15	NA	21848058	21876472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.66	chr4	+	4802	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	306	junction_10	51.2387548638723	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTGGCTATGATACAT	0	True	NA	15	True	AATAAA	-15	NA	21848058	21876472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.67	chr4	+	2923	10	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	394	intron_retention	FALSE	canonical	0	0	junction_1	183.330909074881	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGAGTCGAAGTGTAG	0	True	NA	-82	True	CATAAA	-30	NA	21848058	21874258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848293_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.68	chr4	+	3517	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-11	intron_retention	FALSE	canonical	3	26	junction_4	131.398021294082	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTAAACTCTTGCAC	0	True	NA	2	True	AATAAA	-14	NA	21848058	21875245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.69	chr4	+	3167	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	902	1	317	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCAGGCCATTACACCAG	0	True	NA	NA	False	AATGAA	-12	NA	21848058	21875573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.7	chr4	+	4644	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	0	intron_retention	FALSE	canonical	3	310	junction_7	52.6472069065561	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	439	False	NA	13	True	AATAAA	-25	NA	21848016	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.70	chr4	+	4262	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	166.58321326637	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	0	True	NA	13	True	AATAAA	-25	NA	21848058	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.71	chr4	+	4188	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	476	-119	1	119	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCATGATTACTAATAG	0	True	NA	NA	False	ATTAAA	-24	NA	21848058	21876594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.72	chr4	+	6169	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	332	intron_retention	FALSE	canonical	3	306	junction_9	53.9494505057887	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTTTGAAAAATGAATAC	0	True	NA	NA	False	TATAAA	-43	NA	21848058	21876807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585_21874673_21874912
ES.23021.73	chr4	+	4557	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_3	137.926248408343	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	3	True	NA	13	True	AATAAA	-25	NA	21848061	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21857613_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.74	chr4	+	4769	9	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	151.163766739917	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	6	True	NA	10	True	AATAAA	-22	NA	21848064	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862182_21865960_21866015_21869515_21871609_21873585
ES.23021.75	chr4	+	3998	10	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_1	183.330909074881	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCTTGCACCTTAATT	15	True	NA	9	True	AATAAA	-21	NA	21848073	21875252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.76	chr4	+	4299	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.790256410248	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	19	False	NA	18	True	AATAAA	-18	NA	21848077	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848389_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.77	chr4	+	4702	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	40	-273	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAAATGGCTGTTTACA	62	False	NA	-2	True	AATAAA	-21	NA	21848120	21876194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.78	chr4	+	8401	6	NIC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	1584	0	intron_retention	FALSE	canonical	3	435	junction_5	4.66476151587624	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	7593	False	NA	13	True	AATAAA	-25	NA	21855651	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
ES.23021.79	chr4	+	8386	5	NIC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	-2027	0	intron_retention	FALSE	canonical	3	435	junction_4	5.06828373317832	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	8640	False	NA	13	True	AATAAA	-25	NA	21856698	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.8	chr4	+	3132	11	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	434	1219	-31	0	intron_retention	FALSE	canonical	3	310	junction_8	50.2622124463299	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	439	False	NA	13	True	AATAAA	-25	NA	21848016	21875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.80	chr4	+	4379	6	NIC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	-1532	-3	intron_retention	TRUE	canonical	1	3	junction_1	175.558537246128	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTTGCACCTTAATTT	9135	False	NA	10	True	AATAAA	-22	NA	21857193	21875253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21857369_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.81	chr4	+	5445	6	NIC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	282	0	intron_retention	FALSE	canonical	3	26	junction_1	166.361774455552	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	NA	False	NA	10	True	AATAAA	-10	NA	21859280	21876467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.82	chr4	+	5082	7	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	11399	-8	455	0	3prime_fragment	FALSE	canonical	3	310	junction_4	49.0804328514826	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	NA	False	NA	18	True	AATAAA	-18	NA	21859453	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ES.23021.83	chr4	+	4944	7	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	1089	0	intron_retention	FALSE	canonical	3	306	junction_6	50.5656888501372	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	NA	False	NA	18	True	AATAAA	-18	NA	21860087	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585_21874673_21874912
ES.23021.84	chr4	+	5615	4	NIC	ENSMUSG00000028248.16	novel	4407	11	NA	NA	3030	345	intron_retention	FALSE	canonical	3	435	junction_3	5.79271573232759	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACATTCAATTTTCAA	NA	False	NA	NA	False	TATAAA	-30	NA	21862028	21876820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21862178_21865876_21866015_21869515_21871609_21873585
ES.23021.85	chr4	+	2644	2	ISM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	26001	8	-620	0	3prime_fragment	FALSE	canonical	3	306	junction_1	0	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTGCTGGCTATGA	2549	False	NA	10	True	AATAAA	-10	NA	21873583	21876467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21874673_21874912
ES.23021.86	chr4	+	2850	1	Genic_Genomic	ENSMUSG00000028248.16	novel	NA	NA	NA	NA	470	1048	mono-exon	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTGTAATGTGTAT	138	False	NA	NA	False	AAGAAA	-37	NA	21874673	21877523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_21874700_21877500
ES.23021.87	chr4	+	1304	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-21	1368	-21	-1368	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTGGTGAGG	5116	False	NA	48	True	NA	NA	NA	21879651	21910794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ES.23021.88	chr4	+	2655	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	-2	-2	-2	2	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGCCATTGTGCTT	-12	True	NA	13	True	NA	NA	NA	21879670	21912164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ES.23021.89	chr4	+	2980	8	NNC	ENSMUSG00000028247.3	novel	2651	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.023577824064	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGCCATTGTG	-8	True	NA	10	True	NA	NA	NA	21879674	21912161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21879797_21881134_21881467_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ES.23021.9	chr4	+	4068	12	NNC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	131.000599329901	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	439	False	NA	18	True	AATAAA	-18	NA	21848016	21876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874630_21874912
ES.23021.90	chr4	+	1429	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	3	1219	3	-1219	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTTGTCTATGGTA	-7	True	NA	NA	False	NA	NA	NA	21879675	21910943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ES.23021.92	chr4	+	2249	4	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	19383	0	344	0	3prime_fragment	FALSE	canonical	3	302	junction_2	7.76029781788188	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGCCATTGTGC	NA	False	NA	11	True	NA	NA	NA	21899055	21912162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_21899158_21900263_21900507_21908482_21908643_21910418
ES.23022.1	chr4	-	1822	1	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTGAGAACTCTGTT	-6	True	NA	NA	False	NA	NA	NA	21848441	21846619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21846600_21848400
ES.23022.2	chr4	-	1352	1	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGATTTATTTATT	8	True	NA	NA	False	NA	NA	NA	21848427	21847075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21847100_21848400
ES.23023.1	chr4	-	246	1	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTAGATGGATGAGAG	NA	False	NA	NA	False	NA	NA	NA	21858068	21857822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21857800_21858100
ES.23024.1	chr4	-	3271	2	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAACATCAATGAAATAAA	NA	False	NA	NA	False	TTTAAA	-42	NA	21874925	21869677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21871607_21873583
ES.23024.2	chr4	-	2230	3	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAACATCAATGAAATAAA	NA	False	NA	NA	False	TTTAAA	-42	NA	21874922	21869677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21870402_21871435_21871603_21873583
ES.23024.3	chr4	-	3720	1	Antisense	novelGene_ENSMUSG00000028248.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAACATCAATGAAATAAA	NA	False	NA	NA	False	TTTAAA	-42	NA	21873397	21869677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_21869700_21873400
ES.23025.1	chr4	-	158	1	Intergenic	novelGene_18902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	21908961	21908803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_21908800_21909000
ES.23026.1	chr4	+	5760	5	NNC	ENSMUSG00000028246.14	novel	1603	4	NA	NA	-14246	1525	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5.59016994374947	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGGTAGGGATCAGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	21917082	21998364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_21917326_21936632_21936769_21948691_21948889_21982385_21982503_21993297
ES.23026.11	chr4	+	174	1	Intergenic	novelGene_18903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGCAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21954805	21954979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_21954800_21955000
ES.23026.3	chr4	+	6237	5	FSM	ENSMUSG00000028246.14	ENSMUST00000123481.2	4465	5	-238	-1534	-210	1534	multi-exon	FALSE	canonical	2	7	junction_3	3.56195171219375	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCAGCTCAGTTTATTC	-14	True	NA	NA	False	AATAAA	-23	NA	21931118	21998373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21982385_21982503_21993297
ES.23026.4	chr4	+	6457	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	-211	-3619	-209	1531	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATCAGCTCAGTTTA	-13	True	NA	NA	False	AATAAA	-20	NA	21931119	21998370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
ES.23026.5	chr4	+	1701	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	-4	930	-2	-325	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAAATCCATTTTTGT	-2	True	NA	NA	False	AAAACA	-23	NA	21931326	21993821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
ES.23026.6	chr4	+	5310	5	FSM	ENSMUSG00000028246.14	ENSMUST00000123481.2	4465	5	-27	-818	1	818	multi-exon	FALSE	canonical	2	7	junction_3	3.56195171219375	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTTGGTGTGGTTC	1	True	NA	NA	False	ATTAAA	-1	NA	21931329	21997657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21982385_21982503_21993297
ES.23026.7	chr4	+	1695	3	NIC	ENSMUSG00000028246.14	novel	4465	5	NA	NA	1	212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGTGCTTCATAAATGTT	3	True	NA	NA	False	TTTAAA	-40	NA	21931331	21994358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_21931830_21936632_21936769_21993297
ES.23026.8	chr4	+	2032	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	9	586	7	19	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGACTAGCTGTGTGGT	11	True	NA	NA	False	NA	NA	NA	21931339	21994165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
ES.23026.9	chr4	+	2213	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	21	393	-5	212	multi-exon	FALSE	canonical	2	5	junction_3	4.02988833592198	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGTGCTTCATAAATGTT	23	True	NA	NA	False	TTTAAA	-40	NA	21931351	21994358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
ES.23027.1	chr4	-	312	1	Intergenic	novelGene_18904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATATGATGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	22029893	22029581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_22029600_22029900
ES.23028.1	chr4	+	5399	1	Genic_Genomic	ENSMUSG00000040410.15	novel	NA	NA	NA	NA	-3	-13787	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCCTCTTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	22357539	22362938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_22357500_22362900
ES.23028.11	chr4	+	13037	7	NIC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	42	junction_6	15.7559512565887	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-2	True	NA	NA	False	AATAAA	-44	NA	22357579	22434091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22390922_22403531_22403746_22422716_22422789_22427149
ES.23028.12	chr4	+	6831	8	NIC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_4	23.9455163882937	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	0	True	NA	NA	False	AATAAA	-44	NA	22357581	22434091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22427463_22433566
ES.23028.13	chr4	+	3608	9	NIC	ENSMUSG00000040410.15	novel	3641	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	28.3259487925824	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	1	True	NA	NA	False	AATAAA	-44	NA	22357582	22434091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22423928_22427149_22427463_22433566
ES.23028.14	chr4	+	2469	9	NNC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.6575500725522	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTTCTTTGTTAAGAA	6	True	NA	NA	False	AATAAA	-39	NA	22357587	22434086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_22357682_22375660_22375744_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ES.23028.15	chr4	+	2600	10	NNC	ENSMUSG00000040410.15	novel	2570	10	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.7115363249572	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	21	True	NA	NA	False	AATAAA	-41	NA	22357602	22434088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_22357682_22375660_22375771_22376480_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22425421_22425524_22427149_22427463_22433566
ES.23028.16	chr4	+	1620	6	ISM	ENSMUSG00000040410.15	ENSMUST00000184582.2	2570	10	-5	30278	-5	27072	5prime_fragment	FALSE	canonical	3	42	junction_4	16.3144108076265	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTTTCAAATATTATT	29	True	NA	NA	False	AATAAA	-19	NA	22357610	22403797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531
ES.23028.17	chr4	+	6407	6	NIC	ENSMUSG00000040410.15	novel	3641	9	NA	NA	19128	0	intron_retention	FALSE	canonical	3	42	junction_2	8.08455317256309	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	5603	False	NA	NA	False	AATAAA	-41	NA	22376743	22434088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22427463_22433566
ES.23028.18	chr4	+	3513	1	NIC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	43110	27513	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGTGGACATCGAAGTA	NA	False	NA	NA	False	NA	NA	NA	22400725	22404238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22400700_22404200
ES.23028.19	chr4	+	1490	1	FSM	ENSMUSG00000103000.2	ENSMUST00000195510.2	3805	1	2312	3	2312	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAAATAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	22410602	22412092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_22410600_22412100
ES.23028.2	chr4	+	2541	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	7	-2	7	2	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTTAAGAATCTTTAT	-32	True	NA	NA	False	AATAAA	-19	NA	22357549	22434093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ES.23028.3	chr4	+	3771	10	NIC	ENSMUSG00000040410.15	novel	2570	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	29.3122820084553	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	-15	True	NA	NA	False	AATAAA	-41	NA	22357566	22434088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22423928_22427149_22427463_22433145_22433259_22433566
ES.23028.4	chr4	+	3245	8	NIC	ENSMUSG00000040410.15	novel	2546	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	42	junction_3	11.68637790641	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-13	True	NA	NA	False	AATAAA	-44	NA	22357568	22434091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_22357682_22375660_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ES.23028.5	chr4	+	2471	9	NNC	ENSMUSG00000040410.15	novel	2478	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.5673882353292	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTGTTAAGAATCT	-11	True	NA	NA	False	AATAAA	-42	NA	22357570	22434089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422723_22422789_22427149_22427469_22433573
ES.23028.6	chr4	+	2695	9	NNC	ENSMUSG00000040410.15	novel	2570	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.9838667696593	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	-11	True	NA	NA	False	AATAAA	-44	NA	22357570	22434091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22427149_22427463_22433009_22433259_22433566
ES.23028.7	chr4	+	2482	9	FSM	ENSMUSG00000040410.15	ENSMUST00000184455.8	2478	9	1	-5	1	2	multi-exon	FALSE	canonical	2	4	junction_4	22.7156333832011	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTTAAGAATCTTTAT	-10	True	NA	NA	False	AATAAA	-19	NA	22357571	22434093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ES.23028.8	chr4	+	3681	10	NNC	ENSMUSG00000040410.15	novel	2570	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.0074064931384	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	-7	True	NA	NA	False	AATAAA	-41	NA	22357574	22434088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22423928_22427149_22427463_22433145_22433266_22433655
ES.23028.9	chr4	+	1754	6	ISM	ENSMUSG00000040410.15	ENSMUST00000185029.8	3641	9	19	30165	8	27174	5prime_fragment	FALSE	canonical	3	42	junction_4	16.3144108076265	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTTTTAAATGATGT	-3	True	NA	NA	False	ATTAAA	-23	NA	22357578	22403899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531
ES.23029.1	chr4	-	6457	2	Antisense	novelGene_ENSMUSG00000040410.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGGCATTCCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	22432370	22421552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_22422788_22427148
ES.23029.2	chr4	-	6126	1	Antisense	novelGene_ENSMUSG00000040410.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22427707	22421581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_22421600_22427700
ES.2303.1	chr10	-	3792	1	Antisense	novelGene_ENSMUSG00000015757.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAGACACCCCTTGAGG	NA	False	NA	NA	False	AAGAAA	-35	NA	7682506	7678714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_7678700_7682500
ES.23030.1	chr4	-	174	1	Intergenic	novelGene_18905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	22941354	22941180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_22941200_22941400
ES.23031.1	chr4	+	173	1	Intergenic	novelGene_18906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	23276642	23276815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_23276600_23276800
ES.23032.1	chr4	-	410	1	Intergenic	novelGene_18907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATATTACTGTCTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	24496378	24495968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_24496000_24496400
ES.23033.1	chr4	+	4526	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	-47	-1	-47	1	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCTGTGAATATTTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	24496403	24602951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.10	chr4	+	4281	25	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	86.3510277877455	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-26	True	NA	NA	False	ATTAAA	-23	NA	24496440	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24496635_24496841_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.12	chr4	+	4399	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_3	70.6658561339244	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCTGTGAATATTTAT	-24	True	NA	NA	False	ATTAAA	-24	NA	24496442	24602951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.13	chr4	+	4335	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-6	0	intron_retention	FALSE	canonical	1	2	junction_15	87.6118411559979	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-22	True	NA	NA	False	ATTAAA	-23	NA	24496444	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.15	chr4	+	4431	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_2	81.7383069707606	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-16	True	NA	NA	False	ATTAAA	-23	NA	24496450	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.16	chr4	+	4408	23	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	82.6804562834511	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-16	True	NA	NA	False	ATTAAA	-23	NA	24496450	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502931_24503113_24505344_24505436_24507313_24507445_24508386_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.17	chr4	+	4310	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	5	2	intron_retention	FALSE	canonical	3	4	junction_10	105.943880711032	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCTGTGAATATTTATT	-11	True	NA	NA	False	ATTAAA	-25	NA	24496455	24602952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.19	chr4	+	2809	14	NNC	ENSMUSG00000045751.17	novel	3224	17	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	11	junction_8	108.696744424664	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACACTGAATGTTCGCAA	-8	True	NA	NA	False	AATAAA	-16	NA	24496458	24574791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380
ES.23033.2	chr4	+	5214	3	NNC	ENSMUSG00000045751.17	novel	969	9	NA	NA	-42	-1399	intron_retention	TRUE	non_canonical	0	0	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCAGGGATGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	24496408	24502014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24499415_24499735_24500683_24500753
ES.23033.20	chr4	+	6584	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	intron_retention	FALSE	canonical	2	4	junction_18	89.5741070910396	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591151_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.21	chr4	+	5435	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_22	100.319904970715	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24599112_24600075_24600154_24600323_24602573
ES.23033.22	chr4	+	4258	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	21	junction_19	88.2378921996367	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.23	chr4	+	4213	24	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	86.7879670733994	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24496635_24496841_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.24	chr4	+	9363	22	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	129	junction_14	77.4664289808664	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.25	chr4	+	4213	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	81.6338359738375	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-8	True	NA	NA	False	ATTAAA	-23	NA	24496458	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496809_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.26	chr4	+	3800	10	NIC	ENSMUSG00000045751.17	novel	3224	17	NA	NA	-2	2144	intron_retention	FALSE	canonical	2	2	junction_5	125.77944639647	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGAGCAGGGGAGAG	-7	True	NA	NA	False	NA	NA	NA	24496459	24531307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043
ES.23033.27	chr4	+	4324	23	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	9	junction_2	87.9210883042006	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	-7	True	NA	NA	False	ATTAAA	-15	NA	24496459	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.28	chr4	+	4453	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_22	92.4057584601596	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACAGCTCTCTGTGAA	-7	True	NA	NA	False	ATTAAA	-17	NA	24496459	24602944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600167_24600323_24602573
ES.23033.29	chr4	+	5620	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_23	88.4584423910219	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAACAGCTCTCTGT	-7	True	NA	NA	False	ATTAAA	-14	NA	24496459	24602941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24601413
ES.23033.3	chr4	+	3239	17	FSM	ENSMUSG00000045751.17	ENSMUST00000173079.8	3224	17	-15	0	-15	0	multi-exon	FALSE	canonical	3	129	junction_15	87.5590648862241	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCATATCGTTAGTT	-31	True	NA	NA	False	AATAAA	-17	NA	24496435	24581338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101
ES.23033.30	chr4	+	1159	6	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	143.521426971724	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCTCGTTGATAAAG	-7	True	NA	13	True	AATAAA	-22	NA	24496459	24503417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ES.23033.31	chr4	+	4376	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_18	92.0303845608593	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588298_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.33	chr4	+	4586	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_10	97.1979295046968	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24521780_24521898_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.34	chr4	+	1956	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-2	-604	-2	604	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTGCATTAGAGAT	-7	True	NA	NA	False	NA	NA	NA	24496459	24504017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ES.23033.37	chr4	+	4382	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	11	junction_8	87.1164182078273	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.38	chr4	+	4337	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_7	110.269578588987	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-7	True	NA	NA	False	ATTAAA	-23	NA	24496459	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505384_24505436_24507313_24507353_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596299_24598785_24598883_24600154_24600323_24602573
ES.23033.39	chr4	+	4300	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_17	89.6871629057506	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	-6	True	NA	NA	False	ATTAAA	-15	NA	24496460	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.4	chr4	+	5361	22	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_2	91.6242697254449	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-30	True	NA	NA	False	ATTAAA	-23	NA	24496436	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24601432
ES.23033.40	chr4	+	4457	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	4	junction_9	98.0580245644102	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	-3	True	NA	NA	False	ATTAAA	-15	NA	24496463	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.41	chr4	+	1085	5	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	166.523271646938	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTCATTCTCGTT	0	True	NA	6	True	AATAAA	-15	NA	24496466	24503410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496809_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ES.23033.42	chr4	+	4315	22	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	3	-4	intron_retention	FALSE	canonical	1	1	junction_2	62.5885314018355	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	1	True	NA	NA	False	ATTAAA	-15	NA	24496467	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.43	chr4	+	4460	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_12	106.247757676772	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	2	True	NA	NA	False	ATTAAA	-23	NA	24496468	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535592_24535805_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.46	chr4	+	6694	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	5	0	intron_retention	FALSE	canonical	3	64	junction_14	80.8188081579165	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	3	True	NA	NA	False	ATTAAA	-23	NA	24496469	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.47	chr4	+	4175	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	93.5685187888177	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	3	True	NA	NA	False	ATTAAA	-23	NA	24496469	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.48	chr4	+	4700	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_21	100.395597720551	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	4	True	NA	NA	False	ATTAAA	-23	NA	24496470	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24593622_24593862_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.49	chr4	+	4263	23	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_17	100.746552142468	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	6	True	NA	NA	False	ATTAAA	-23	NA	24496472	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503080_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.5	chr4	+	1375	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	-23	-2	-12	2	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTCTCGTTGATAA	-28	True	NA	11	True	AATAAA	-20	NA	24496438	24503415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ES.23033.50	chr4	+	1318	5	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	8	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	171.444415190463	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTCTGTCATTCTCG	6	True	NA	4	True	AATAAA	-13	NA	24496472	24503408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500091_24502767_24502836_24502931
ES.23033.51	chr4	+	4466	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	15	0	intron_retention	FALSE	canonical	1	1	junction_3	83.3146494492682	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	13	True	NA	NA	False	ATTAAA	-23	NA	24496479	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502730_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.52	chr4	+	6603	14	NNC	ENSMUSG00000045751.17	novel	3224	17	NA	NA	15	11556	intron_retention	FALSE	canonical	0	0	junction_13	110.98270028844	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATACTCATATCTTTAA	13	True	NA	NA	False	AATAAA	-30	NA	24496479	24540719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24536580
ES.23033.53	chr4	+	4297	22	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	18	-4	intron_retention	FALSE	canonical	2	2	junction_4	90.7967254446653	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	16	True	NA	NA	False	ATTAAA	-15	NA	24496482	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24502747_24502836_24502931_24503113_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.54	chr4	+	5580	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	18	-6	intron_retention	FALSE	canonical	0	0	junction_23	92.3111160966514	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAAAACAGCTCTCTG	16	True	NA	NA	False	ATTAAA	-13	NA	24496482	24602940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24601432
ES.23033.55	chr4	+	4383	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	18	0	intron_retention	FALSE	canonical	1	7	junction_9	89.7062354448449	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	16	True	NA	NA	False	ATTAAA	-23	NA	24496482	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.56	chr4	+	4406	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	18	0	intron_retention	FALSE	canonical	3	12	junction_5	86.7601478296214	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	16	True	NA	NA	False	ATTAAA	-23	NA	24496482	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505384_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.58	chr4	+	6696	23	ISM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	33	0	19	0	intron_retention	FALSE	canonical	3	129	junction_15	76.53022953747	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	17	True	NA	NA	False	ATTAAA	-23	NA	24496483	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154
ES.23033.59	chr4	+	4329	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	19	0	intron_retention	FALSE	non_canonical	0	0	junction_11	99.1464517952694	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	17	True	NA	NA	False	ATTAAA	-23	NA	24496483	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529089_24532948_24533130_24535938_24536449_24574380_24574580_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.60	chr4	+	5103	13	NIC	ENSMUSG00000045751.17	novel	3224	17	NA	NA	19	-4	intron_retention	FALSE	canonical	3	162	junction_11	88.2406353230881	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACACTGAATGTTCGCAA	17	True	NA	NA	False	AATAAA	-16	NA	24496483	24574791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380
ES.23033.62	chr4	+	6724	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	19	0	intron_retention	FALSE	canonical	3	4	junction_9	98.3579551159619	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	17	True	NA	NA	False	ATTAAA	-23	NA	24496483	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.63	chr4	+	4482	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	24	-1	intron_retention	FALSE	canonical	3	4	junction_10	96.5534448289305	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACAGCTCTCTGTGAAT	22	True	NA	NA	False	ATTAAA	-18	NA	24496488	24602945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.64	chr4	+	4115	21	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_2	64.1375669947029	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTCTCTGTGAATA	24	True	NA	NA	False	ATTAAA	-19	NA	24496490	24602946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.65	chr4	+	4358	4	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	28	-1399	intron_retention	FALSE	non_canonical	0	0	junction_2	174.891077213473	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCAGGGATGAGTTTA	26	True	NA	NA	False	NA	NA	NA	24496492	24502014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497066_24497837_24499415_24499735_24500683_24500753
ES.23033.66	chr4	+	4333	23	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	32	-4	intron_retention	FALSE	canonical	2	2	junction_5	89.7403624052639	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	30	True	NA	NA	False	ATTAAA	-15	NA	24496496	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.67	chr4	+	4304	23	FSM	ENSMUSG00000045751.17	ENSMUST00000050446.13	4261	23	-39	-4	-39	0	multi-exon	FALSE	canonical	2	10	junction_10	89.3642490499666	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	38	False	NA	NA	False	ATTAAA	-23	NA	24496504	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.68	chr4	+	4193	22	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-33	-2	intron_retention	FALSE	canonical	0	0	junction_3	84.5955832086564	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACAGCTCTCTGTGAA	44	False	NA	NA	False	ATTAAA	-17	NA	24496510	24602944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502931_24503113_24505344_24505436_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.69	chr4	+	1048	5	NNC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	192.988989323225	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTCTGTCATTCTCGT	46	False	NA	5	True	AATAAA	-14	NA	24496512	24503409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24502747_24502836_24502931
ES.23033.7	chr4	+	1169	6	NIC	ENSMUSG00000045751.17	novel	1350	5	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	154.538797717596	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCTCGTTGATAAAG	-27	True	NA	13	True	AATAAA	-22	NA	24496439	24503417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24496635_24496841_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ES.23033.71	chr4	+	5850	22	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	1	junction_10	105.344290311026	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	1417	False	NA	NA	False	ATTAAA	-15	NA	24497883	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532907_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591151_24591246_24596137_24596302_24598785_24598883_24600154
ES.23033.73	chr4	+	3377	21	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	243	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	81.9588921350209	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	8938	False	NA	NA	False	ATTAAA	-15	NA	24505404	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521097_24521145_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24590150_24590249_24591151_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.74	chr4	+	2489	12	ISM	ENSMUSG00000045751.17	ENSMUST00000050446.13	4261	23	39393	4	-411	-4	3prime_fragment	FALSE	canonical	3	129	junction_3	30.4424670756641	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	24535936	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.75	chr4	+	2680	1	Intergenic	novelGene_18909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGGATCAGAAAATGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	24552279	24554959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_24552300_24555000
ES.23033.76	chr4	+	6667	9	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-4423	0	intron_retention	FALSE	canonical	3	21	junction_5	64.8536814683638	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24574424	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24574575_24578752_24578904_24580053_24580203_24581101_24586343_24588202_24588373_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.77	chr4	+	3113	5	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	10078	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.0076527624246	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	3454	False	NA	NA	False	ATTAAA	-23	NA	24588925	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24591246_24596137_24596302_24598785_24598883_24600167_24600323_24602573
ES.23033.78	chr4	+	4528	4	ISM	ENSMUSG00000045751.17	ENSMUST00000154349.9	3603	19	87246	7	13560	-4	3prime_fragment	FALSE	canonical	3	213	junction_1	10.7806410858642	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	6936	False	NA	NA	False	ATTAAA	-15	NA	24592407	24602942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_24596302_24598785_24598883_24600154_24600323_24602573
ES.23033.79	chr4	+	5311	1	NIC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	18792	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24597639	24602950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24597600_24603000
ES.23033.9	chr4	+	4288	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	83.527274321359	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTCTCTGTGAATA	-27	True	NA	NA	False	ATTAAA	-19	NA	24496439	24602946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ES.23034.1	chr4	-	2903	1	Intergenic	novelGene_18908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTTCCC	NA	False	NA	NA	False	TTTAAA	-38	NA	24549296	24546393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_24546400_24549300
ES.23035.1	chr4	-	7900	1	Intergenic	novelGene_18910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACTTGACTAAAAACGC	NA	False	NA	NA	False	TTTAAA	-45	NA	24564559	24556659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_24556700_24564600
ES.23036.1	chr4	-	175	1	Intergenic	novelGene_18911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTTGGCAAGAA	NA	False	NA	NA	False	NA	NA	NA	24579782	24579607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_24579600_24579800
ES.23037.1	chr4	+	3842	1	Antisense	novelGene_ENSMUSG00000040387.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGACTTTGGTGTTA	NA	False	NA	NA	False	NA	NA	NA	24616464	24620306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_24616500_24620300
ES.23038.1	chr4	-	2174	11	NNC	ENSMUSG00000040387.17	novel	7143	11	NA	NA	52	30	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.96816441593117	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATTATCGAGAATT	15	True	NA	NA	False	AAAAAG	-12	NA	24850879	24617242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682236_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
ES.23038.2	chr4	-	2289	10	FSM	ENSMUSG00000040387.17	ENSMUST00000084781.6	2287	10	1	-3	1	3	multi-exon	FALSE	canonical	0	0	junction_6	2.94811092476036	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	10	True	NA	NA	False	NA	NA	NA	24851085	24617269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24743857_24743966_24792616_24792798_24800805_24800891_24850737
ES.23038.3	chr4	-	2398	11	FSM	ENSMUSG00000040387.17	ENSMUST00000108218.10	7143	11	29	4716	-9	3	multi-exon	TRUE	canonical	1	2	junction_4	2.76405499221705	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	0	True	NA	NA	False	NA	NA	NA	24851095	24617269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24850737
ES.23038.4	chr4	-	2250	10	NNC	ENSMUSG00000040387.17	novel	2287	10	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.94811092476036	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	14	True	NA	NA	False	NA	NA	NA	24851081	24617269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_24617547_24626896_24626992_24629159_24629353_24632642_24632702_24649539_24650267_24682054_24682236_24743857_24743966_24792616_24792798_24800805_24800891_24850737
ES.23038.5	chr4	-	2547	3	NNC	ENSMUSG00000040387.17	novel	5970	8	NA	NA	54990	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	24620437	24617269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_24617547_24618006_24619587_24619747
ES.23038.6	chr4	-	3970	7	NNC	ENSMUSG00000040387.17	novel	1848	7	NA	NA	13307	2253	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	3.41565025531987	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGTATTTGTACTGT	NA	False	NA	NA	False	AATGAA	-12	NA	24837624	24647048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_24650267_24682054_24682236_24708952_24709052_24743857_24743966_24792616_24792798_24800805_24800891_24837526
ES.23038.7	chr4	-	3258	5	NNC	ENSMUSG00000040387.17	novel	5970	8	NA	NA	-19	-84828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAAGCAATAT	-10	True	NA	NA	False	NA	NA	NA	24851105	24734671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_24737188_24743857_24743966_24792616_24792798_24800805_24800891_24850737
ES.23039.1	chr4	+	886	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	-40	2786	-40	-1270	multi-exon	FALSE	canonical	3	446	junction_2	23.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTTTGTTCTTTGTA	3167	False	NA	17	True	ATTAAA	-17	NA	24898042	24902215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898303_24898572_24898677_24901693
ES.23039.2	chr4	+	2167	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	-37	1502	-37	-6	multi-exon	FALSE	canonical	3	446	junction_2	23.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTTTTCTGGTTTTT	3170	False	NA	8	True	AATAAA	-21	NA	24898045	24903499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898303_24898572_24898677_24901693
ES.23039.3	chr4	+	5421	1	Genic_Genomic	ENSMUSG00000028261.14	novel	NA	NA	NA	NA	-3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTTTTCTGGTTTTTT	3204	False	NA	9	True	AATAAA	-22	NA	24898079	24903500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_24898100_24903500
ES.23039.4	chr4	+	1119	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-51	1290	-3	-1270	multi-exon	FALSE	canonical	3	446	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTTTGTTCTTTGTA	3204	False	NA	17	True	ATTAAA	-17	NA	24898079	24902215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898677_24901693
ES.23039.5	chr4	+	1358	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-43	1043	5	-1023	multi-exon	FALSE	canonical	3	446	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTATCTGACATGCT	-32	True	NA	NA	False	ATTAAA	-17	NA	24898087	24902462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898677_24901693
ES.23039.6	chr4	+	2395	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	-43	6	5	-6	multi-exon	FALSE	canonical	3	446	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTTTTCTGGTTTTT	-32	True	NA	8	True	AATAAA	-21	NA	24898087	24903499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898677_24901693
ES.23039.7	chr4	+	3630	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	5	-3	5	3	multi-exon	FALSE	canonical	3	446	junction_2	23.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTGCCTACTTCTTAA	-32	True	NA	NA	False	AATAAA	-19	NA	24898087	24905004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898303_24898572_24898677_24901693
ES.23039.8	chr4	+	4111	1	NIC	ENSMUSG00000028261.14	novel	3632	3	NA	NA	22	-1270	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTTTGTTCTTTGTA	-15	True	NA	17	True	ATTAAA	-17	NA	24898104	24902215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_24898100_24902200
ES.23039.9	chr4	+	1064	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	24	2544	24	-1028	multi-exon	FALSE	canonical	3	446	junction_2	23.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTAGTGGTATCTGAC	-13	True	NA	NA	False	ATTAAA	-12	NA	24898106	24902457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_24898303_24898572_24898677_24901693
ES.2304.1	chr10	-	4816	7	FSM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	-430	-6	-430	6	multi-exon	FALSE	canonical	3	30	junction_6	9.12262145560267	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGGCTTGTCTTTGAA	858	False	NA	0	True	ATTAAA	-23	NA	7832424	7781410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7831564
ES.2304.2	chr10	-	4524	8	NIC	ENSMUSG00000015755.17	novel	4380	7	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	19.8185647866863	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGCTTGTCTTTG	1289	False	NA	-2	True	ATTAAA	-21	NA	7831993	7781412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7808831_7808973_7831564
ES.2304.3	chr10	-	4074	8	NNC	ENSMUSG00000015755.17	novel	4380	7	NA	NA	-122	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.6635217326557	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTGTGGCTTGTCTTT	1503	False	NA	-3	True	ATTAAA	-20	NA	7831779	7781413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796232_7796325_7796379_7800448_7800637_7831564
ES.2304.5	chr10	-	4298	4	ISM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	42560	85	-2184	-85	3prime_fragment	FALSE	canonical	3	37	junction_3	7.48331477354788	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGATGGTTTTGTGATTT	3380	False	NA	-2	True	AATAAA	-20	NA	7789434	7781501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151
ES.2304.6	chr10	-	217	1	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTAAGAATCCAGGTT	6757	False	NA	NA	False	AAGAAA	-10	NA	7817832	7817615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7817600_7817800
ES.2304.7	chr10	-	5358	1	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAGAAAGA	2174	False	NA	NA	False	NA	NA	NA	7831108	7825750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_7825800_7831100
ES.23040.1	chr4	+	5695	3	NNC	ENSMUSG00000040372.3	novel	389	2	NA	NA	28	3491	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTATTGTTTTGT	-31	True	NA	NA	False	AATAAA	-31	NA	24966434	25012724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_24966625_25007129_25009541_25009630
ES.23041.1	chr4	+	158	1	Intergenic	novelGene_18912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	25032144	25032302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_25032100_25032300
ES.23042.1	chr4	-	3499	1	Intergenic	novelGene_18913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGCAATCATCCATCC	NA	False	NA	NA	False	NA	NA	NA	25188646	25185147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_25185100_25188600
ES.23043.1	chr4	-	6210	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	6	2351	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGGTTGTGCCTGT	0	True	NA	NA	False	NA	NA	NA	25281815	25246248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.10	chr4	-	4367	19	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	95	intron_retention	FALSE	canonical	3	7	junction_18	50.3518790949758	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTATTGCTTGAATG	-6	True	NA	85	True	NA	NA	NA	25281821	25248504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
ES.23043.11	chr4	-	4329	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	1	-14	1	9	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTCTATGTAATGCTT	-5	True	NA	-1	True	AATAAA	-28	NA	25281820	25248590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.13	chr4	-	4618	14	NNC	ENSMUSG00000040359.15	novel	5189	19	NA	NA	5869	7	intron_retention	FALSE	canonical	0	0	junction_1	57.7276814630606	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACAGTCTATGTAATGC	5968	False	NA	-3	True	AATAAA	-26	NA	25275879	25248592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250473_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25270619_25275805
ES.23043.14	chr4	-	3467	17	NIC	ENSMUSG00000040359.15	novel	5189	19	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	62.1569334426981	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTATACAGTCTAT	5	True	NA	-10	True	AATAAA	-19	NA	25281771	25248599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.15	chr4	-	5072	20	NNC	ENSMUSG00000040359.15	novel	5189	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.1431781729915	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTATACAGTCTAT	4	True	NA	-10	True	AATAAA	-19	NA	25281772	25248599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25270142_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279664_25280622_25280769_25281675
ES.23043.16	chr4	-	4771	19	NIC	ENSMUSG00000040359.15	novel	5189	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	78	junction_1	36.2561191089105	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTATACAGTCTAT	-5	True	NA	-10	True	AATAAA	-19	NA	25281820	25248599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622
ES.23043.18	chr4	-	6125	7	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	22430	-4	22357	-1	intron_retention	FALSE	canonical	3	153	junction_3	28.8872328585177	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTTATACAGTCTA	NA	False	NA	-11	True	AATAAA	-18	NA	25259391	25248600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997
ES.23043.19	chr4	-	3876	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTTATACAGTCTA	14	False	NA	-11	True	AATAAA	-18	NA	25281833	25248600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.2	chr4	-	4286	12	ISM	ENSMUSG00000040359.15	ENSMUST00000142949.8	5189	19	14050	-1449	14038	1449	3prime_fragment	FALSE	canonical	3	78	junction_1	42.0745108445709	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGTAGTTTTTCTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	25267710	25247150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691
ES.23043.20	chr4	-	5200	19	FSM	ENSMUSG00000040359.15	ENSMUST00000142949.8	5189	19	-12	1	-9	-1	multi-exon	FALSE	canonical	3	78	junction_1	37.6058588159339	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTTATACAGTCTA	4	True	NA	-11	True	AATAAA	-18	NA	25281772	25248600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.21	chr4	-	3809	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	55.5668348045298	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTTATACAGTCTA	0	True	NA	-11	True	AATAAA	-18	NA	25281815	25248600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
ES.23043.22	chr4	-	4289	18	FSM	ENSMUSG00000040359.15	ENSMUST00000038705.8	2687	18	-58	-1544	0	2	multi-exon	FALSE	canonical	1	4	junction_16	52.1131321905794	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTATGTTATACAGTC	-6	True	NA	-13	True	AATAAA	-16	NA	25281821	25248602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25280622_25280769_25281675
ES.23043.23	chr4	-	3676	20	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.557837567912	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTATGTTATACAGTC	-6	True	NA	-13	True	AATAAA	-16	NA	25281821	25248602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250473_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267779_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
ES.23043.24	chr4	-	3821	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	57.856996973274	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTATGTTATACAG	2	True	NA	-15	True	AATAAA	-14	NA	25281774	25248604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278735_25280618_25280769_25281675
ES.23043.27	chr4	-	3957	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	9	350	9	-350	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCGTATTCAGCTTCC	3	True	NA	NA	False	AATAAA	-23	NA	25281812	25248954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.28	chr4	-	4823	18	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	47	353	-11	-353	intron_retention	FALSE	canonical	3	153	junction_3	21.8307424261955	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTTCGTATTCAGCT	2	True	NA	NA	False	AATAAA	-20	NA	25281774	25248957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622
ES.23043.29	chr4	-	3513	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-8	-355	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTTTCGTATTCAG	-14	True	NA	NA	False	AATAAA	-18	NA	25281829	25248959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.3	chr4	-	4617	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	27	779	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAGAGGAAACTTTATT	-18	True	NA	NA	False	GATAAA	-15	NA	25281794	25247820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.30	chr4	-	3565	20	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-7	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	56.7829126496261	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTATTTTCGTATTC	6	True	NA	NA	False	AATAAA	-16	NA	25281770	25248961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281562
ES.23043.31	chr4	-	3671	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	-27	672	-27	-672	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGCTGTAGAGGTGGCT	-1	True	NA	NA	False	ATTAAA	-42	NA	25281848	25249276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.32	chr4	-	3149	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	27	-684	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAAACATTAAGGGGCT	-18	True	NA	NA	False	ATTAAA	-30	NA	25281794	25249288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.34	chr4	-	3466	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	6	844	6	698	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTTTATATAATGT	0	True	NA	NA	False	AATAAA	-23	NA	25281815	25249448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.36	chr4	-	2852	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	17	91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	52.8017489422275	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTAAATTTATAGTGAA	11	True	NA	94	True	AATAAA	-19	NA	25281804	25250055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278599_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.38	chr4	-	2804	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	-27	1539	-27	3	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGTTTGTTATTTAAT	-1	True	NA	6	True	AATAAA	-27	NA	25281848	25250143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.39	chr4	-	2723	19	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_18	50.3518790949758	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTGTTTGTTATTT	-4	True	NA	3	True	AATAAA	-24	NA	25281819	25250146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
ES.23043.4	chr4	-	4297	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	6	438	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGTCAATACAACTTCA	0	True	NA	NA	False	NA	NA	NA	25281815	25248161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.41	chr4	-	4821	18	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	153	junction_3	23.4389437271602	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGGACTTGTTTGTTA	-6	True	NA	0	True	AATAAA	-21	NA	25281782	25250149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.42	chr4	-	2759	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.4182172695964	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGGACTTGTTTGTTA	4	True	NA	0	True	AATAAA	-21	NA	25281811	25250149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255998_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278126_25278626_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.43	chr4	-	3000	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	52.486565006417	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGGACTTGTTTGTTA	15	True	NA	0	True	AATAAA	-21	NA	25281761	25250149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279664_25280622_25280769_25281675
ES.23043.45	chr4	-	2684	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	5	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.8988085935523	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTATATGCTTTAATG	-1	True	NA	1	True	AATAAA	-28	NA	25281816	25250218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251944_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.46	chr4	-	3745	18	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	5	-87	intron_retention	FALSE	canonical	3	153	junction_3	22.9194467224295	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCTGAATCTAGAACATA	-1	True	NA	-14	True	AATAAA	-13	NA	25281816	25250233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.47	chr4	-	3057	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-11	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	52.486565006417	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAGTTCTGAATCTAG	2	True	NA	-20	True	AATAAA	-7	NA	25281774	25250239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279798_25280622_25280769_25281675
ES.23043.48	chr4	-	2480	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	20	-185	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	51.995518562827	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTATGGGAAGCTTTA	14	True	NA	-112	True	AATAAA	-23	NA	25281801	25250331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267779_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.49	chr4	-	2545	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	40	1731	-18	-189	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGACTTTATGGGAAGC	-5	True	NA	-116	True	AATAAA	-19	NA	25281781	25250335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.5	chr4	-	5360	19	FSM	ENSMUSG00000040359.15	ENSMUST00000142949.8	5189	19	-13	-158	-10	158	multi-exon	FALSE	canonical	3	78	junction_1	37.6058588159339	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTATAATGTTGTTAGG	3	True	NA	NA	False	ACTAAA	-24	NA	25281773	25248441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.50	chr4	-	3102	14	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	1105	4538	1032	-2996	internal_fragment	FALSE	canonical	3	188	junction_2	17.6872902584424	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAAGTGCATTATTTAC	1131	False	NA	-1	True	AATAAA	-19	NA	25280716	25253142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622
ES.23043.51	chr4	-	2051	15	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	48	5739	-10	-4197	5prime_fragment	FALSE	canonical	3	188	junction_2	18.7215089658709	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATGACTTTTTCCA	3	True	NA	NA	False	AGTAAA	-19	NA	25281773	25254343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.6	chr4	-	4482	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	-11	-155	-11	150	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGCAAATCTATAATG	15	False	NA	NA	False	ACTAAA	-16	NA	25281832	25248449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23043.7	chr4	-	3998	19	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	5	148	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	71.963124987904	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTCAGCAAATCTATAA	-1	True	NA	NA	False	ACTAAA	-14	NA	25281816	25248451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255993_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25280607_25280769_25281675
ES.23043.9	chr4	-	3980	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	-13	102	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	36.6180404503927	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTTGAATGTTTGCCA	13	False	NA	92	True	NA	NA	NA	25281834	25248497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ES.23044.1	chr4	+	277	1	Intergenic	novelGene_18914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAACAGAAAAATAGAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	25304361	25304638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_25304400_25304600
ES.23045.1	chr4	+	178	1	Intergenic	novelGene_18917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATTAGCCATAAGC	NA	False	NA	NA	False	NA	NA	NA	25780376	25780554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_25780400_25780600
ES.23046.1	chr4	-	12137	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	-1	-2	-1	2	multi-exon	FALSE	canonical	3	36	junction_2	8.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGGTTCTGTACAAT	302	False	NA	2	True	AATAAA	-23	NA	25800147	25609329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.10	chr4	-	4447	4	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	-38	2011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7521042876493	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTGCTGCTGGTATAA	556	False	NA	35	True	NA	NA	NA	25799893	25616886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25620821_25709027_25709115_25755552_25755674_25799588
ES.23046.11	chr4	-	4486	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	53	7595	53	1971	multi-exon	FALSE	canonical	3	36	junction_2	8.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATATCTCTTATGAAA	0	True	NA	-5	True	AATAAA	-22	NA	25800093	25616926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.12	chr4	-	4076	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	318	7740	27	1826	multi-exon	FALSE	canonical	3	36	junction_2	8.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGACACTCTTTCTGA	-2	True	NA	NA	False	AATATA	-16	NA	25799828	25617071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.13	chr4	-	2972	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	-137	9299	-39	267	multi-exon	FALSE	canonical	3	36	junction_2	8.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGTAAATTTTTGTT	166	False	NA	NA	False	ATTAAA	-4	NA	25800283	25618630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.14	chr4	-	2942	2	FSM	ENSMUSG00000055373.9	ENSMUST00000108199.2	2579	2	-96	-267	-96	267	multi-exon	FALSE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGTAAATTTTTGTT	109	False	NA	NA	False	ATTAAA	-4	NA	25800340	25618630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25799588
ES.23046.15	chr4	-	2404	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	298	9432	7	134	multi-exon	FALSE	canonical	3	36	junction_2	8.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAAAATTCTTACCAA	-22	True	NA	NA	False	AATAAA	-40	NA	25799848	25618763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.16	chr4	-	8838	3	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	7	-80401	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATCGTGTATTTTAC	-22	True	NA	NA	False	NA	NA	NA	25799848	25699298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25701420_25702657_25709115_25799588
ES.23046.17	chr4	-	3476	2	Intergenic	novelGene_18915	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATCGTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	25704012	25699298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_25701416_25702653
ES.23046.18	chr4	-	2881	1	Intergenic	novelGene_18916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	25781289	25778408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_25778400_25781300
ES.23046.2	chr4	-	4888	1	ISM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	184830	1097	184539	-1097	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCCAGGCATTTTGTTT	368	False	NA	NA	False	AATAAA	-24	NA	25615316	25610428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25610400_25615300
ES.23046.3	chr4	-	10301	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	342	1491	51	-1491	multi-exon	FALSE	canonical	3	36	junction_2	8.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGCTGGTAAATCTTA	22	True	NA	NA	False	AATAAA	-16	NA	25799804	25610822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.4	chr4	-	3814	1	ISM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	181619	5382	181328	4184	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGATAAAGGAAGAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	25618527	25614713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_25614700_25618500
ES.23046.5	chr4	-	5335	4	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	43	2980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7521042876493	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACTTCTTAGAATTC	14	True	NA	NA	False	AATAAA	-23	NA	25799812	25615917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25620821_25709027_25709115_25755552_25755674_25799588
ES.23046.6	chr4	-	5226	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	318	6590	27	2976	multi-exon	FALSE	canonical	3	36	junction_2	8.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTTGAAACTTCTTAGA	-2	True	NA	NA	False	AATAAA	-19	NA	25799828	25615921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.7	chr4	-	5091	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	334	6709	43	2857	multi-exon	FALSE	canonical	3	36	junction_2	8.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGGATAATCTCTTCT	14	True	NA	NA	False	NA	NA	NA	25799812	25616040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.8	chr4	-	5252	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	-170	7052	-72	2514	multi-exon	FALSE	canonical	3	36	junction_2	8.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGATTTTCTTTTTTAT	133	False	NA	NA	False	AATAAA	-27	NA	25800316	25616383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_25620821_25709027_25709115_25799588
ES.23046.9	chr4	-	4878	4	NNC	ENSMUSG00000055373.9	novel	12134	3	NA	NA	1	2481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7521042876493	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAATGAATAAAAA	-28	True	NA	NA	False	TTTAAA	-23	NA	25799854	25616416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_25620821_25709027_25709115_25755552_25755674_25799588
ES.23047.1	chr4	+	1506	1	Intergenic	novelGene_18918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	25816010	25817516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_25816000_25817500
ES.23048.1	chr4	-	4923	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	-47	-9	-47	9	multi-exon	TRUE	canonical	3	44	junction_4	9.33742469849155	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTTATGATAAGT	NA	False	NA	5	True	AATAAA	-34	NA	26346938	26324496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ES.23048.10	chr4	-	4516	6	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.0651251893416	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCATAACTGGAAATCTA	6	True	NA	-13	True	AATAAA	-16	NA	26346885	26324514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340635_26340970_26340999_26346596
ES.23048.13	chr4	-	2995	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	-4	1876	-4	1663	multi-exon	FALSE	canonical	3	44	junction_4	9.33742469849155	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGGAGAAATTGACTG	-4	True	NA	NA	False	AATAAA	-15	NA	26346895	26326381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ES.23048.14	chr4	-	2440	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	2	2425	2	1114	multi-exon	FALSE	canonical	3	44	junction_4	9.33742469849155	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATATATAGTTTATTA	2	True	NA	NA	False	ATTAAA	-7	NA	26346889	26326930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ES.23048.15	chr4	-	1920	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	2	2945	2	594	multi-exon	FALSE	canonical	3	44	junction_4	9.33742469849155	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTCCTGATGATGTGGT	2	True	NA	NA	False	AAGAAA	-13	NA	26346889	26327450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ES.23048.2	chr4	-	4146	3	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	-8	True	NA	-7	True	AATAAA	-22	NA	26346865	26324508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_26328309_26329085_26329163_26346596
ES.23048.3	chr4	-	4803	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	196	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7815340893439	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGAAATCTATTCATT	-2	True	NA	-7	True	AATAAA	-22	NA	26346658	26324508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346424
ES.23048.4	chr4	-	4618	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7815340893439	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAACTGGAAATCTATTCA	3	True	NA	-9	True	AATAAA	-20	NA	26346888	26324510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346837
ES.23048.5	chr4	-	5381	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7815340893439	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAACTGGAAATCTATTCA	7	True	NA	-9	True	AATAAA	-20	NA	26346884	26324510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346070
ES.23048.6	chr4	-	4502	5	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.7815340893439	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAACTGGAAATCTATTC	-5	True	NA	-10	True	AATAAA	-19	NA	26346896	26324511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340635_26346596
ES.23048.8	chr4	-	4658	5	NNC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.6904651573303	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAACTGGAAATCTATT	10	False	NA	-11	True	AATAAA	-18	NA	26346881	26324512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340608_26340999_26346596
ES.23048.9	chr4	-	4675	4	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	36	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	28.1582827759238	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCATAACTGGAAATCTA	5	True	NA	-13	True	AATAAA	-16	NA	26346818	26324514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_26328309_26329085_26329163_26340416_26340999_26346596
ES.23049.1	chr4	-	177	1	Intergenic	novelGene_18919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGCT	NA	False	NA	NA	False	NA	NA	NA	26611225	26611048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_26611000_26611200
ES.2305.1	chr10	+	173	1	Intergenic	novelGene_1752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTGTT	NA	False	NA	NA	False	NA	NA	NA	8358343	8358516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_8358300_8358500
ES.23050.1	chr4	-	180	1	Intergenic	novelGene_18920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATACCTCTTT	NA	False	NA	NA	False	NA	NA	NA	26732637	26732457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_26732500_26732600
ES.23051.1	chr4	+	179	1	Intergenic	novelGene_18921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	27511297	27511476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_27511300_27511500
ES.23052.1	chr4	+	178	1	Intergenic	novelGene_18922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAATAAGACAGAT	NA	False	NA	NA	False	NA	NA	NA	27904865	27905043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_27904900_27905000
ES.23053.1	chr4	-	416	1	Intergenic	novelGene_18923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCCCCAAAAGAAAACCTT	NA	False	NA	NA	False	AATAAA	-21	NA	28812903	28812487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_28812500_28812900
ES.23054.1	chr4	+	3717	17	FSM	ENSMUSG00000028289.13	ENSMUST00000108191.2	6615	17	-208	3106	-89	-2422	multi-exon	TRUE	canonical	1	1	junction_9	6.28987281270456	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGATTTCAGACTATTC	225	False	NA	NA	False	AATGAA	-16	NA	28813041	28964393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947539_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.10	chr4	+	5493	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	35	1218	14	-534	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAGGTGCTTATTTTT	2	True	NA	NA	False	AATGAA	-18	NA	28813165	28966281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.11	chr4	+	5277	17	NNC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	17	-726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.29452887434794	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACAATGTGCTTGAGG	5	True	NA	NA	False	AATATA	-12	NA	28813168	28966089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942591_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.12	chr4	+	3884	17	NNC	ENSMUSG00000028289.13	novel	648	6	NA	NA	299	-2449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.80913881311163	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAATGAAATATTTTC	461	False	NA	NA	False	AATAAA	-19	NA	28813624	28964366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28814246_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.13	chr4	+	3770	17	NNC	ENSMUSG00000028289.13	novel	648	6	NA	NA	303	-2449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.37254854826544	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAATGAAATATTTTC	465	False	NA	NA	False	AATAAA	-19	NA	28813628	28964366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28814151_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.14	chr4	+	5634	17	NNC	ENSMUSG00000028289.13	novel	648	6	NA	NA	321	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.80913881311163	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAATGTGCTTGAGGGT	483	False	NA	NA	False	AATATA	-14	NA	28813646	28966091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28814293_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.15	chr4	+	6981	17	NNC	ENSMUSG00000028289.13	novel	648	6	NA	NA	347	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.80913881311163	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCAGTCATTGGT	509	False	NA	NA	False	NA	NA	NA	28813672	28967511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28814246_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.16	chr4	+	4093	17	NNC	ENSMUSG00000028289.13	novel	648	6	NA	NA	397	-2035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.65089279721151	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAATGATCCATAAATA	559	False	NA	NA	False	NA	NA	NA	28813722	28964780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_28814151_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947539_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.17	chr4	+	3752	1	NIC	ENSMUSG00000028289.13	novel	2880	10	NA	NA	-437	1354	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGTGACTTTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	28871403	28875155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_28871400_28875200
ES.23054.18	chr4	+	601	1	Intergenic	novelGene_18924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28874124	28874725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_28874100_28874700
ES.23054.19	chr4	+	7682	3	ISM	ENSMUSG00000028289.13	ENSMUST00000108191.2	6615	17	141189	3129	82515	-2445	3prime_fragment	FALSE	canonical	3	16	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAAATATTTTCCTTA	NA	False	NA	NA	False	AATAAA	-23	NA	28954438	28964370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_28961483_28962409_28962566_28963888
ES.23054.2	chr4	+	4071	17	FSM	ENSMUSG00000028289.13	ENSMUST00000108191.2	6615	17	-200	2744	-81	-2060	multi-exon	FALSE	canonical	1	1	junction_9	6.28987281270456	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATGAAAAAAAAAAAAAAAA	233	False	NA	NA	False	NA	NA	NA	28813049	28964755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947539_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.3	chr4	+	6839	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	-81	-12	-81	12	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCCAGTCATTGGT	233	False	NA	NA	False	NA	NA	NA	28813049	28967511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.4	chr4	+	3613	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	0	3133	0	-2449	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAATGAAATATTTTC	0	True	NA	NA	False	AATAAA	-19	NA	28813130	28964366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.5	chr4	+	4735	5	FSM	ENSMUSG00000028289.13	ENSMUST00000149030.8	3187	5	-194	-1354	1	1354	multi-exon	FALSE	canonical	2	9	junction_4	7.79021822544144	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATGTGACTTTAAAGGA	1	True	NA	NA	False	NA	NA	NA	28813131	28875155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660
ES.23054.6	chr4	+	3577	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	8	-2441	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTTTCCTTAAAAT	-4	True	NA	NA	False	AATAAA	-27	NA	28813159	28964374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.7	chr4	+	5310	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	30	1406	9	-722	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATGTGCTTGAGGGTTA	-3	True	NA	NA	False	AATATA	-16	NA	28813160	28966093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.8	chr4	+	5291	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	11	-724	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAATGTGCTTGAGGGT	-1	True	NA	NA	False	AATATA	-14	NA	28813162	28966091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23054.9	chr4	+	4088	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	35	2623	14	-1939	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGGTTTATGTGTA	2	True	NA	NA	False	AATAAA	-18	NA	28813165	28964876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ES.23055.1	chr4	+	488	1	Intergenic	novelGene_18925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCTGTTGTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	29582687	29583175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_29582700_29583200
ES.23056.1	chr4	+	3593	1	Intergenic	novelGene_18926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29591855	29595448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_29591900_29595400
ES.23057.1	chr4	-	154	1	Intergenic	novelGene_18927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTTGTTTTCACAC	NA	False	NA	NA	False	AATAAA	-7	NA	30078211	30078057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_30078100_30078200
ES.23058.1	chr4	+	2913	1	Intergenic	novelGene_18928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATTTTGTGGGATCTG	NA	False	NA	NA	False	NA	NA	NA	30912168	30915081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_30912200_30915100
ES.23059.1	chr4	-	200	1	Intergenic	novelGene_18929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGGGAGGCAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	31422032	31421832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_31421800_31422000
ES.2306.10	chr10	-	183	1	Intergenic	novelGene_1753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATCCCTCTTTGGG	NA	False	NA	NA	False	NA	NA	NA	8361557	8361374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8361400_8361600
ES.2306.2	chr10	-	3950	9	NNC	ENSMUSG00000047712.9	novel	4228	8	NA	NA	-19890	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.01338006955277	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTCTTTTTTAACGT	NA	False	NA	NA	False	ATTAAA	-16	NA	8414479	8080517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8413585_8413684_8414234
ES.2306.3	chr10	-	4357	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	-74	-55	-74	2	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTCTTTTTTAACGT	NA	False	NA	NA	False	ATTAAA	-16	NA	8394663	8080517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ES.2306.4	chr10	-	4259	8	NNC	ENSMUSG00000047712.9	novel	4228	8	NA	NA	-1647	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.96246764420263	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATTTTTTCTGTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	8396236	8080570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8395531
ES.2306.5	chr10	-	4169	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	0	59	0	-59	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAAGTGTTCCTTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	8394589	8080631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ES.2306.6	chr10	-	4037	9	NNC	ENSMUSG00000047712.9	novel	4228	8	NA	NA	-4	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.7213962456729	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAAGTGTTCCTTAATT	NA	False	NA	NA	False	AATAAA	-16	NA	8394593	8080631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_8081788_8081923_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ES.2306.7	chr10	-	3954	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	12	262	12	-262	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGATGGGTGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	8394577	8080834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ES.2306.8	chr10	-	1747	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	6	2475	6	-2475	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAACAAAACATTCCT	NA	False	NA	NA	False	NA	NA	NA	8394583	8083047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ES.2306.9	chr10	-	178	1	Intergenic	novelGene_1751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGTAACTCATAATT	NA	False	NA	NA	False	NA	NA	NA	8224019	8223841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8223800_8224000
ES.23060.1	chr4	+	3321	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-209	2661	-209	1246	multi-exon	TRUE	canonical	3	147	junction_6	19.7680890262564	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	31963887	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.10	chr4	+	4237	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-155	1691	-155	-1691	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGATGGTCACTAATTCC	-10	True	NA	NA	False	NA	NA	NA	31963941	32021776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.11	chr4	+	2267	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-154	3660	-154	247	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTATGTCAGTTACCT	-9	True	NA	NA	False	NA	NA	NA	31963942	32019807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.12	chr4	+	7214	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-151	-1067	intron_retention	FALSE	canonical	3	147	junction_6	20.3262282668368	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGTATGTAGGAATGG	-6	True	NA	9	True	AATAAA	-18	NA	31963945	32022400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.13	chr4	+	4844	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-121	1235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.8957701518562	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	24	True	NA	NA	False	AATAAA	-9	NA	31963975	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31982193_31982346_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31993403_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.14	chr4	+	3137	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	-129	2661	-106	1246	multi-exon	FALSE	canonical	3	14	junction_11	45.1522855333912	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	39	False	NA	NA	False	AATAAA	-20	NA	31963990	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.15	chr4	+	5477	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-8	1246	intron_retention	FALSE	canonical	3	147	junction_6	20.3262282668368	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-32	True	NA	NA	False	AATAAA	-20	NA	31964088	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.16	chr4	+	3444	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	-25	2250	-2	1657	multi-exon	FALSE	canonical	3	14	junction_11	45.1522855333912	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTAGGTGACATGAGT	-26	True	NA	NA	False	AATAAA	-23	NA	31964094	32021217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.17	chr4	+	2161	11	ISM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	1	30165	1	527	5prime_fragment	FALSE	canonical	3	147	junction_6	21.5925913220252	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATATCTTTTAATT	-23	True	NA	NA	False	AGTAAA	-40	NA	31964097	31993302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386
ES.23060.18	chr4	+	5692	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	-22	-1	1	1	multi-exon	FALSE	canonical	3	14	junction_11	45.1522855333912	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTACTGAGTTTT	-23	True	NA	23	True	NA	NA	NA	31964097	32023468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.19	chr4	+	3253	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	11	1246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	59.7706689938495	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-13	True	NA	NA	False	AATAAA	-20	NA	31964107	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31982193_31982346_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.2	chr4	+	4930	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-209	1052	-209	-1052	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTAGCTGGCTTCTCTA	NA	False	NA	24	True	AATAAA	-33	NA	31963887	32022415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.20	chr4	+	3508	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.4634725426923	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGTACAGTTTACTG	-12	True	NA	17	True	NA	NA	NA	31964108	32023462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32020500_32022747
ES.23060.21	chr4	+	2993	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-10	1246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4634725426923	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-11	True	NA	NA	False	AATAAA	-20	NA	31964109	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964174_31964279_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.22	chr4	+	2329	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	17	3427	-6	480	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTCTTCAAAGTGC	-7	True	NA	NA	False	AGTAAA	-13	NA	31964113	32020040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.23	chr4	+	4707	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-4	1646	intron_retention	FALSE	canonical	3	147	junction_6	19.4575321034183	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCCTCAAACTCTATTAG	-5	True	NA	NA	False	AATAAA	-12	NA	31964115	32021206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.24	chr4	+	4581	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-4	-1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4634725426923	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGTATGTAGGAATGG	-5	True	NA	9	True	AATAAA	-18	NA	31964115	32022400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964174_31964279_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.25	chr4	+	5319	15	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-2	1246	intron_retention	FALSE	canonical	0	0	junction_6	49.8497743224581	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-3	True	NA	NA	False	AATAAA	-20	NA	31964117	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.26	chr4	+	4745	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	3	-1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	69.1610157079116	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGTATGTAGGAATGG	2	True	NA	9	True	AATAAA	-18	NA	31964122	32022400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979712_31979875_31981457_31981583_31985685_31985815_31988588_31988716_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002200_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.27	chr4	+	4599	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	5	1235	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	61.0985052497195	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	4	True	NA	NA	False	AATAAA	-9	NA	31964124	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31993403_31995011_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.29	chr4	+	2335	13	NNC	ENSMUSG00000028284.14	novel	5491	16	NA	NA	8	10224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	51.4770714871086	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTTTCATTTTTTCAT	7	True	NA	NA	False	AATATA	-15	NA	31964127	32002999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002090
ES.23060.3	chr4	+	3833	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-189	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.4231383806005	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGTACAGTTTACTG	NA	False	NA	17	True	NA	NA	NA	31963907	32023462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32020709_32022751
ES.23060.31	chr4	+	4274	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.4634725426923	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAGTGTACAGTTTA	8	True	NA	14	True	NA	NA	NA	31964128	32023459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32021276_32022734
ES.23060.32	chr4	+	4550	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	9	1246	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	46.636225190296	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	8	True	NA	NA	False	AATAAA	-20	NA	31964128	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31993403_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.33	chr4	+	5796	17	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	46.3517461914867	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	9	True	NA	22	True	NA	NA	NA	31964129	32023467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31995011_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.34	chr4	+	6649	15	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	11	1246	intron_retention	FALSE	canonical	3	147	junction_6	19.9950248914114	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	10	True	NA	NA	False	AATAAA	-20	NA	31964130	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.35	chr4	+	4229	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.4634725426923	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTTACTGAGTTTTGA	17	True	NA	25	True	NA	NA	NA	31964137	32023470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32021223_32022728
ES.23060.36	chr4	+	8228	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	22	-5	intron_retention	FALSE	canonical	0	0	junction_6	72.1586793116393	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGTACAGTTTACTG	21	True	NA	17	True	NA	NA	NA	31964141	32023462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31982193_31982346_31985685_31985815_31988588_31988716_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.37	chr4	+	3088	17	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	22	1235	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4074582333734	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	21	True	NA	NA	False	AATAAA	-9	NA	31964141	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31977478_31977557_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.39	chr4	+	5873	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	24	-1067	intron_retention	FALSE	canonical	3	147	junction_6	19.4575321034183	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGTATGTAGGAATGG	23	True	NA	9	True	AATAAA	-18	NA	31964143	32022400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.4	chr4	+	5959	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-183	-3	-183	3	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTTACTGAGTTTTGA	NA	False	NA	25	True	NA	NA	NA	31963913	32023470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.40	chr4	+	2730	19	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	58.1251576395048	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	24	True	NA	22	True	NA	NA	NA	31964144	32023467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32020031_32020241_32020313_32023096
ES.23060.42	chr4	+	4669	17	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	65	-1072	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	46.3517461914867	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGTATGTAGG	64	False	NA	4	True	AATAAA	-13	NA	31964184	32022395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31995011_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.43	chr4	+	2817	16	ISM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	10724	2672	-2527	1235	3prime_fragment	FALSE	canonical	3	147	junction_5	20.4163333306122	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	NA	False	NA	NA	False	AATAAA	-9	NA	31974820	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.44	chr4	+	4608	17	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-2511	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	46.7900897626837	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	NA	False	NA	22	True	NA	NA	NA	31974836	32023467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32021890_32022754
ES.23060.46	chr4	+	2706	15	ISM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	13225	2672	-26	1235	3prime_fragment	FALSE	canonical	3	147	junction_4	20.0444658757697	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	NA	False	NA	NA	False	AATAAA	-9	NA	31977321	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.47	chr4	+	3875	13	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-1038	1246	intron_retention	FALSE	canonical	0	0	junction_4	51.5694650178012	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	31978459	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31979875_31981457_31981583_31985685_31985815_31988588_31988716_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.48	chr4	+	2593	13	ISM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	15638	2672	237	1235	3prime_fragment	FALSE	canonical	3	147	junction_2	18.6478700005002	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAATCCCTAAGA	NA	False	NA	NA	False	AATAAA	-9	NA	31979734	32020795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.49	chr4	+	178	1	Intergenic	novelGene_18931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	31983461	31983639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_31983500_31983600
ES.23060.5	chr4	+	5104	18	NNC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-176	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.4634725426923	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTTTACTGAGTTTTG	NA	False	NA	24	True	NA	NA	NA	31963920	32023469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500_32021894_32022740
ES.23060.50	chr4	+	5002	11	ISM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	21587	0	17	0	3prime_fragment	FALSE	canonical	3	152	junction_2	18.417654573805	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	NA	False	NA	22	True	NA	NA	NA	31985683	32023467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.51	chr4	+	4901	5	ISM	ENSMUSG00000028284.14	ENSMUST00000131310.2	590	7	5623	-499	5623	499	3prime_fragment	FALSE	canonical	3	178	junction_1	8.5146931829632	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTCAAAAATCTGATT	NA	False	NA	NA	False	AGTAAA	-32	NA	31998095	32020059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.52	chr4	+	8125	5	ISM	ENSMUSG00000028284.14	ENSMUST00000131310.2	590	7	5808	-3908	5808	1	3prime_fragment	FALSE	canonical	3	178	junction_1	8.5146931829632	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTACTGAGTTTT	NA	False	NA	23	True	NA	NA	NA	31998280	32023468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.53	chr4	+	5023	5	ISM	ENSMUSG00000028284.14	ENSMUST00000131310.2	590	7	7836	-2834	7836	-1073	3prime_fragment	FALSE	canonical	3	178	junction_1	8.5146931829632	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGGCTGGTATGTAG	NA	False	NA	3	True	AATAAA	-12	NA	32000308	32022394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.54	chr4	+	2929	2	NNC	ENSMUSG00000028284.14	novel	5416	15	NA	NA	27745	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	4670	False	NA	22	True	NA	NA	NA	32020217	32023467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32022435_32022755
ES.23060.6	chr4	+	2737	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-162	3198	-162	709	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTACTGACTTTCG	-17	True	NA	18	True	ATTAAA	-30	NA	31963934	32020269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.7	chr4	+	4482	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	-156	1246	intron_retention	FALSE	canonical	3	147	junction_6	19.4575321034183	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-11	True	NA	NA	False	AATAAA	-20	NA	31963940	32020806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.8	chr4	+	3678	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	-155	2250	-155	1657	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTAGGTGACATGAGT	-10	True	NA	NA	False	AATAAA	-23	NA	31963941	32021217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23060.9	chr4	+	4789	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	-178	1058	-155	-1058	multi-exon	FALSE	canonical	3	14	junction_11	45.1522855333912	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGAATGGTAGCTGGCT	-10	True	NA	18	True	AATAAA	-27	NA	31963941	32022409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ES.23061.1	chr4	-	2061	1	Intergenic	novelGene_18930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTGAATCTCCTATTT	6517	False	NA	NA	False	NA	NA	NA	31964062	31962001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_31962000_31964100
ES.23062.1	chr4	-	2814	1	Intergenic	novelGene_18932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGCCTGAGA	4096	False	NA	NA	False	NA	NA	NA	32042728	32039914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32039900_32042700
ES.23063.1	chr4	+	156	1	Intergenic	novelGene_18933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	5793	False	NA	NA	False	NA	NA	NA	32057513	32057669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32057500_32057700
ES.23064.1	chr4	-	175	1	Intergenic	novelGene_18934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32132322	32132147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32132100_32132300
ES.23065.1	chr4	+	3829	6	NIC	ENSMUSG00000040270.17	novel	8882	7	NA	NA	-18	-17	intron_retention	FALSE	canonical	0	0	junction_2	3.48711915483254	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACTCAAGTATATTGTA	28	True	NA	NA	False	AATGAA	-14	NA	32238785	32581182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32239090_32317197_32317305_32501612_32501868_32561777_32563368_32575239_32575447_32579816
ES.23065.2	chr4	+	4233	1	Intergenic	novelGene_18935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7340	False	NA	NA	False	NA	NA	NA	32452870	32457103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32452900_32457100
ES.23065.3	chr4	+	2491	3	ISM	ENSMUSG00000040270.17	ENSMUST00000171600.2	8493	5	144615	5326	-12881	-417	3prime_fragment	FALSE	canonical	3	4	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCATGCCTCAATTTT	NA	False	NA	NA	False	NA	NA	NA	32562049	32580782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32563368_32575239_32575447_32579816
ES.23065.4	chr4	+	181	1	Intergenic	novelGene_18936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTCACCGACCTGA	NA	False	NA	NA	False	NA	NA	NA	32572570	32572751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32572600_32572800
ES.23065.5	chr4	+	904	1	ISM	ENSMUSG00000040270.17	ENSMUST00000108180.9	8882	7	341216	5181	5089	-276	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTTCCATCTGTGC	NA	False	NA	NA	False	NA	NA	NA	32580019	32580923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32580000_32580900
ES.23066.1	chr4	+	197	1	Intergenic	novelGene_18937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCGTTCACAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	32588561	32588758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32588600_32588800
ES.23067.1	chr4	+	6691	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-190	5	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	77.5370878999205	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTATGCTTCTTTTGTT	NA	False	NA	12	True	AATAAA	-25	NA	32615260	32653270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615493_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.10	chr4	+	6694	12	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-7	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	104.164523393929	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	-5	True	NA	6	True	AATAAA	-19	NA	32615443	32653264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32632845_32632955_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.11	chr4	+	6227	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-7	-276	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	77.5370878999205	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAGCATTTTAAATGT	-5	True	NA	NA	False	AATAAA	-16	NA	32615443	32652989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615493_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.12	chr4	+	6557	11	FSM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	-34	276	-7	-276	multi-exon	FALSE	canonical	3	20	junction_1	76.4659401302305	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAGCATTTTAAATGT	-5	True	NA	NA	False	AATAAA	-16	NA	32615443	32652989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32615740_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.13	chr4	+	1268	9	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	89.0589692282591	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	-4	True	NA	6	True	AATAAA	-19	NA	32615444	32653264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32648026_32648127_32649172_32649258_32652673
ES.23067.15	chr4	+	6594	12	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-2	125469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	81.7021399317147	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAAATTCCAGGCTAT	0	True	NA	NA	False	NA	NA	NA	32615448	32778734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673_32653260_32778715
ES.23067.16	chr4	+	6432	9	ISM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-19	4606	3	-4606	5prime_fragment	FALSE	canonical	3	150	junction_1	36.0674281727988	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	32615453	32648659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026
ES.23067.17	chr4	+	6494	10	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	8	-3487	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	80.3450890430357	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAATATATTTTTTTC	10	True	NA	NA	False	AATAAA	-7	NA	32615458	32649778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631811_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172
ES.23067.18	chr4	+	4375	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	9	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_6	89.330569332586	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	11	True	NA	7	True	AATAAA	-20	NA	32615459	32653265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.19	chr4	+	7943	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-9	8	intron_retention	FALSE	canonical	3	150	junction_1	44.1411876193249	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGCTTCTTTTGTTGTG	12	True	NA	15	True	AATAAA	-28	NA	32615460	32653273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32648127_32649172_32649258_32652673
ES.23067.2	chr4	+	2554	1	Genic_Genomic	ENSMUSG00000028282.13	novel	NA	NA	NA	NA	-19	-13825	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAATAACAAGATCCTGG	-17	True	NA	NA	False	NA	NA	NA	32615431	32617985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_32615400_32618000
ES.23067.20	chr4	+	6512	10	ISM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-6	3467	-3	-3467	5prime_fragment	FALSE	canonical	3	150	junction_1	35.7273626852647	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATATTTGGATGTG	18	True	NA	NA	False	AATAAA	-27	NA	32615466	32649798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172
ES.23067.21	chr4	+	6717	10	NIC	ENSMUSG00000028282.13	novel	6799	11	NA	NA	5	6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	84.5773807429228	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATGCTTCTTTTGTTG	0	True	NA	13	True	AATAAA	-26	NA	32615482	32653271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615740_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.22	chr4	+	6701	10	NIC	ENSMUSG00000028282.13	novel	6799	11	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	106.528150803345	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	8	False	NA	6	True	AATAAA	-19	NA	32615505	32653264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32615740_32624083_32624167_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.23	chr4	+	176	1	Intergenic	novelGene_18939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCCAAAACTATGAA	4632	False	NA	NA	False	NA	NA	NA	32620129	32620305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32620100_32620300
ES.23067.24	chr4	+	6544	10	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	8605	-6	-1	6	3prime_fragment	FALSE	canonical	3	217	junction_4	29.3938769133981	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATGCTTCTTTTGTTG	95	False	NA	13	True	AATAAA	-26	NA	32624082	32653271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.25	chr4	+	6892	9	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-1	-285	intron_retention	FALSE	canonical	3	217	junction_3	30.8319537979675	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAATTTTGTAGCAT	95	False	NA	NA	False	AATAAA	-7	NA	32624082	32652980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32624167_32630177_32630247_32631065_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.26	chr4	+	6262	10	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	8605	276	-1	-276	3prime_fragment	FALSE	canonical	3	217	junction_4	29.3938769133981	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAGCATTTTAAATGT	95	False	NA	NA	False	AATAAA	-16	NA	32624082	32652989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.27	chr4	+	7975	10	NNC	ENSMUSG00000028282.13	novel	300	5	NA	NA	3105	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.463442476886	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTATGCTTCTTTTGT	307	False	NA	11	True	AATAAA	-24	NA	32627188	32653269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32628335_32629806_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.29	chr4	+	8894	1	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	15719	-4569	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAAATTATTCTGATC	NA	False	NA	NA	False	NA	NA	NA	32639802	32648696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32639800_32648700
ES.23067.3	chr4	+	6610	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-41	-12	-19	12	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTTTTGTTGTGTTTA	-17	True	NA	19	True	AATAAA	-32	NA	32615431	32653277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.30	chr4	+	5410	3	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	19310	0	intron_retention	FALSE	canonical	3	269	junction_1	27.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	NA	False	NA	7	True	AATAAA	-20	NA	32643393	32653265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32648127_32649172_32649258_32652673
ES.23067.31	chr4	+	4251	3	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	30497	628	21891	-628	internal_fragment	FALSE	canonical	3	269	junction_2	0.5	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAATTATAATGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	32645974	32652637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32646661_32648026_32648127_32649172
ES.23067.32	chr4	+	164	1	Intergenic	novelGene_18940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTCATATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	32651127	32651291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32651100_32651300
ES.23067.33	chr4	+	2524	1	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	9	-4519	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATGACTCCTAAAGTAT	-9	True	NA	NA	False	NA	NA	NA	32657127	32659651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32657100_32659700
ES.23067.34	chr4	+	9239	58	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	17	43727	17	0	5prime_fragment	TRUE	canonical	2	6	junction_33	4.9159760536614	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGAATTATCCATTTGG	-1	True	NA	NA	False	ATTAAA	-19	NA	32657135	32731480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32657353_32662832_32663060_32666392_32666618_32667090_32667199_32667271_32667465_32668798_32669042_32669462_32669595_32670566_32670671_32671515_32671631_32672830_32673016_32673953_32674036_32674930_32675027_32676741_32676855_32678298_32678448_32679530_32679592_32683542_32683755_32684638_32684740_32685658_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32696221_32696369_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208
ES.23067.35	chr4	+	11187	65	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	25	35947	25	7780	5prime_fragment	FALSE	canonical	2	6	junction_33	6.04844940744113	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTAGTTCCTAAT	7	True	NA	NA	False	ATTAAA	-15	NA	32657143	32739260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32657353_32662832_32663060_32666392_32666618_32667090_32667199_32667271_32667465_32668798_32669042_32669462_32669595_32670566_32670671_32671515_32671631_32672830_32673016_32673953_32674036_32674930_32675027_32676741_32676855_32678298_32678448_32679530_32679592_32683542_32683755_32684638_32684740_32685658_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32696221_32696369_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902
ES.23067.36	chr4	+	18028	102	FSM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	32	-90	-32	80	multi-exon	TRUE	canonical	2	6	junction_33	39.2417570768759	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCTTCCGATTGATCC	14	True	NA	110	True	NA	NA	NA	32657150	32775297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32657353_32662832_32663060_32666392_32666618_32667090_32667199_32667271_32667465_32668798_32669042_32669462_32669595_32670566_32670671_32671515_32671631_32672830_32673016_32673953_32674036_32674930_32675027_32676741_32676855_32678298_32678448_32679530_32679592_32683542_32683755_32684638_32684740_32685658_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32696221_32696369_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.37	chr4	+	169	1	ISM	ENSMUSG00000058006.13	ENSMUST00000151626.2	1508	2	6781	38	6781	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGTAAAATAGC	6774	False	NA	NA	False	NA	NA	NA	32663963	32664132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32664000_32664100
ES.23067.38	chr4	+	8732	46	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	3387	13	intron_retention	FALSE	canonical	2	6	junction_22	4.84189535381383	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGTTTTCAGTAAATG	2383	False	NA	NA	False	ATTAAA	-32	NA	32674936	32731493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32675027_32676741_32676855_32678298_32678448_32679530_32679592_32683542_32683755_32684638_32684740_32685658_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32696221_32696369_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208
ES.23067.39	chr4	+	6409	40	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-9700	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5.94363177790937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCACAGAATTATCCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	32685775	32731477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208
ES.23067.4	chr4	+	6595	11	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-17	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	83.3396064305562	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTATGCTTCTTTTGTT	-15	True	NA	12	True	AATAAA	-25	NA	32615433	32653270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631811_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.40	chr4	+	5032	29	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	43041	43568	-4475	159	internal_fragment	FALSE	canonical	2	6	junction_4	5.68418410852356	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGTGGGGGTCTTGC	NA	False	NA	NA	False	AATATA	-20	NA	32700159	32731639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208
ES.23067.41	chr4	+	13122	69	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	2797	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	42.5539856594154	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGGGTTTACTTTGGT	NA	False	NA	17	True	ATTAAA	-20	NA	32707431	32775204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723474_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.42	chr4	+	11394	60	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-6843	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	42.8059966212614	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATCTTTGATCAGGGT	NA	False	NA	7	True	ATTAAA	-10	NA	32716092	32775194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.44	chr4	+	8804	47	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	63763	11530	-2054	-1540	internal_fragment	FALSE	canonical	3	16	junction_2	24.9062229832069	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACACTTCGCTTGTCC	NA	False	NA	NA	False	AATACA	-14	NA	32720881	32763677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156
ES.23067.45	chr4	+	10327	54	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	630	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	42.9099166505391	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGGTTTGGCTTGGT	519	False	NA	27	True	ATTAAA	-30	NA	32723565	32775214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746458_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.46	chr4	+	9357	47	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	4441	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	42.5856858900044	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATCAGGGTTTACTT	7294	False	NA	13	True	ATTAAA	-16	NA	32730340	32775200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763358_32765114_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.47	chr4	+	7197	39	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-11966	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	41.996512518445	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGGTTTGGCTTGGT	5489	False	NA	27	True	ATTAAA	-30	NA	32738604	32775214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750341_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.49	chr4	+	6376	33	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	84654	-80	-8798	70	3prime_fragment	FALSE	canonical	3	24	junction_1	39.964388444589	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGAAAGAGTGTGCTTC	8657	False	NA	100	True	NA	NA	NA	32741772	32775287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.5	chr4	+	6319	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-38	276	-16	-276	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAGCATTTTAAATGT	-14	True	NA	NA	False	AATAAA	-16	NA	32615434	32652989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.51	chr4	+	7162	28	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-6554	-3	intron_retention	FALSE	canonical	3	40	junction_3	35.9426078108062	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGGGTTTACTTTGGT	NA	False	NA	17	True	ATTAAA	-20	NA	32744016	32775204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.52	chr4	+	5756	29	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	87420	10	-6032	-1	3prime_fragment	FALSE	canonical	3	40	junction_4	36.6103831318552	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTGATCAGGGTTTA	NA	False	NA	10	True	ATTAAA	-13	NA	32744538	32775197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.53	chr4	+	5444	27	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	89321	10	-4131	-1	3prime_fragment	FALSE	canonical	3	40	junction_2	36.2736150380548	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTGATCAGGGTTTA	NA	False	NA	10	True	ATTAAA	-13	NA	32746439	32775197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.54	chr4	+	212	1	Intergenic	novelGene_18941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTTGAGGACAACTTG	NA	False	NA	NA	False	NA	NA	NA	32747173	32747385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32747200_32747400
ES.23067.55	chr4	+	5323	26	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	90721	7	-2731	2	3prime_fragment	FALSE	canonical	3	40	junction_1	35.8150806225534	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATCAGGGTTTACTT	NA	False	NA	13	True	ATTAAA	-16	NA	32747839	32775200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.56	chr4	+	3265	14	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-2695	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	50.7868267875433	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATCAGGGTTTACTT	NA	False	NA	13	True	ATTAAA	-16	NA	32747875	32775200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.57	chr4	+	4958	24	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-937	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	38.0913239505069	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	NA	False	NA	18	True	ATTAAA	-21	NA	32749633	32775205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32768004_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.58	chr4	+	4089	24	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	92531	918	-921	-909	3prime_fragment	FALSE	canonical	3	51	junction_5	33.8587078651663	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTATTTACAACATA	NA	False	NA	NA	False	TATAAA	-20	NA	32749649	32774289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32750036_32750249_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.59	chr4	+	5940	22	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-228	2	intron_retention	FALSE	canonical	1	1	junction_6	39.3328721291997	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGATCAGGGTTTACTT	NA	False	NA	13	True	ATTAAA	-16	NA	32750342	32775200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757739_32757907_32758355_32758500_32759049_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.6	chr4	+	3187	7	ISM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	-35	11214	-13	2550	5prime_fragment	FALSE	canonical	3	150	junction_1	38.5818034253916	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATACTCTGAGCCTTTA	-11	True	NA	NA	False	AATAAA	-17	NA	32615437	32642051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363
ES.23067.61	chr4	+	6868	24	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-151	2451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	38.6772794683124	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTTCATATGTTGTT	NA	False	NA	NA	False	NA	NA	NA	32750419	32777668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32750477_32750912_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950_32777459_32777502
ES.23067.62	chr4	+	4391	22	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	93793	4	341	-4	3prime_fragment	FALSE	canonical	3	51	junction_3	32.6005161123816	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCAGGGTTTACTTTGG	218	False	NA	16	True	ATTAAA	-19	NA	32750911	32775203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32751069_32751211_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.63	chr4	+	5640	7	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	650	-1023	intron_retention	FALSE	canonical	3	51	junction_2	19.1485421551268	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	527	False	NA	NA	False	NA	NA	NA	32751220	32764194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32758500_32759049_32761372_32762251
ES.23067.65	chr4	+	3302	9	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	94965	10993	1513	-1003	intron_retention	FALSE	canonical	3	51	junction_1	19.4357917255768	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCCTAGGGTTGG	1390	False	NA	NA	False	NA	NA	NA	32752083	32764214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251
ES.23067.67	chr4	+	174	1	ISM	ENSMUSG00000058006.13	ENSMUST00000138577.2	2265	3	2871	0	2871	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	2748	False	NA	NA	False	NA	NA	NA	32753441	32753615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32753400_32753600
ES.23067.68	chr4	+	3885	19	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	97310	10	3858	-1	3prime_fragment	FALSE	canonical	3	60	junction_1	28.6084680548338	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTGATCAGGGTTTA	3735	False	NA	10	True	ATTAAA	-13	NA	32754428	32775197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.69	chr4	+	2298	9	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	97403	10993	3951	-1003	internal_fragment	FALSE	canonical	3	60	junction_1	16.1550108325559	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCCTAGGGTTGG	86	False	NA	NA	False	NA	NA	NA	32754521	32764214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156
ES.23067.7	chr4	+	6653	12	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	101.520262196094	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	-11	True	NA	7	True	AATAAA	-20	NA	32615437	32653265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32627727_32627789_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.70	chr4	+	3752	18	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	5804	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.1248316287787	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGGGTTTACTTTGGT	1939	False	NA	17	True	ATTAAA	-20	NA	32756374	32775204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32756516_32757739_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761203_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.71	chr4	+	7801	1	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	5843	-1003	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCCTAGGGTTGG	1978	False	NA	NA	False	NA	NA	NA	32756413	32764214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32756400_32764200
ES.23067.74	chr4	+	2889	14	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	-2027	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	38.5144251774002	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	1720	False	NA	18	True	ATTAAA	-21	NA	32760837	32775205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32760943_32761203_32761372_32762251_32762354_32763202_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.75	chr4	+	2664	12	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	105131	2	-615	-2	3prime_fragment	FALSE	canonical	3	98	junction_1	17.7986906380709	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	3132	False	NA	18	True	ATTAAA	-21	NA	32762249	32775205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.76	chr4	+	3974	11	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	421	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0679695365361	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGGGTTTACTTTGGTT	4168	False	NA	18	True	ATTAAA	-21	NA	32763285	32775205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32764003_32764215_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.77	chr4	+	5307	9	NNC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	1059	0	intron_retention	FALSE	non_canonical	0	0	junction_1	47.021271782035	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGATCAGGGTTTAC	4806	False	NA	11	True	ATTAAA	-14	NA	32763923	32775198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32764003_32764213_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.78	chr4	+	369	1	Intergenic	novelGene_18943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAATTTAAAAAA	4896	False	NA	NA	False	NA	NA	NA	32764013	32764382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32764000_32764400
ES.23067.79	chr4	+	3377	6	NIC	ENSMUSG00000058006.13	novel	17970	102	NA	NA	5077	0	intron_retention	FALSE	canonical	3	133	junction_1	8.50881895447306	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGATCAGGGTTTAC	8824	False	NA	11	True	ATTAAA	-14	NA	32767941	32775198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32768058_32768652_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ES.23067.8	chr4	+	6322	11	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	-10	-261	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	83.3396064305562	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAAAAACTAGTTCACC	-8	True	NA	NA	False	AATAAA	-31	NA	32615440	32653004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631811_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23067.80	chr4	+	723	1	ISM	ENSMUSG00000058006.13	ENSMUST00000071642.11	17970	102	117168	198	11422	-189	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTGTCTCCATGTCT	5948	False	NA	NA	False	TTTAAA	-23	NA	32774286	32775009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32774300_32775000
ES.23067.81	chr4	+	175	1	Intergenic	novelGene_18944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAAATCTGTA	NA	False	NA	NA	False	NA	NA	NA	32778545	32778720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32778500_32778700
ES.23067.9	chr4	+	6838	11	FSM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	-35	-4	-8	4	multi-exon	FALSE	canonical	3	20	junction_1	76.4659401302305	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTATGCTTCTTTTGT	-6	True	NA	11	True	AATAAA	-24	NA	32615442	32653269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32615740_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ES.23068.1	chr4	-	3410	4	NNC	ENSMUSG00000051056.6	novel	1857	2	NA	NA	-12933	1506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCACGTGATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	32615693	32595453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32596999_32600942_32602399_32607268_32607401_32615416
ES.23068.2	chr4	-	174	1	Intergenic	novelGene_18938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGATC	NA	False	NA	NA	False	NA	NA	NA	32606384	32606210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32606200_32606400
ES.23069.1	chr4	-	2348	4	Antisense	novelGene_ENSMUSG00000028282.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32640260	32629726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_32630244_32631062_32631879_32634765_32634882_32639361
ES.2307.1	chr10	+	571	2	Intergenic	novelGene_1760	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATCTCCTAAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	8422556	8424614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_8422870_8424356
ES.23070.1	chr4	-	4515	1	Antisense	novelGene_ENSMUSG00000058006.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTCATGGTCTCAAAC	NA	False	NA	NA	False	NA	NA	NA	32665789	32661274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_32661300_32665800
ES.23071.1	chr4	-	2009	1	Antisense	novelGene_ENSMUSG00000058006.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCCCCACCTTCACTCA	NA	False	NA	NA	False	NA	NA	NA	32735091	32733082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_32733100_32735100
ES.23072.1	chr4	-	5393	1	Antisense	novelGene_ENSMUSG00000058006.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGTAGAGGCATTTAG	NA	False	NA	NA	False	NA	NA	NA	32746688	32741295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_32741300_32746700
ES.23073.1	chr4	-	183	1	Intergenic	novelGene_18942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	32754942	32754759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32754800_32754900
ES.23074.1	chr4	-	1720	1	Intergenic	novelGene_18945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAATGATGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	32785411	32783691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32783700_32785400
ES.23075.1	chr4	-	167	1	Intergenic	novelGene_18946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGCTTTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	32798404	32798237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32798200_32798400
ES.23076.1	chr4	+	175	1	Intergenic	novelGene_18947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	32798497	32798672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32798500_32798700
ES.23077.1	chr4	+	1344	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	-10	-869	-10	693	multi-exon	FALSE	canonical	3	270	junction_2	3	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	32800242	32802252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32800336_32800609_32800751_32801142
ES.23077.2	chr4	+	457	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	7	1	7	-1	multi-exon	FALSE	canonical	3	270	junction_2	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTGGAATCCTCAATT	-8	True	NA	21	True	ATTAAA	-21	NA	32800259	32801382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32800336_32800609_32800751_32801142
ES.23077.3	chr4	+	3802	4	NNC	ENSMUSG00000045854.5	novel	465	3	NA	NA	-11	6966	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	127.774106227444	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCCTTGTTTTATTCC	0	True	NA	NA	False	NA	NA	NA	32800267	32808525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32800336_32800609_32800751_32801142_32801286_32805075
ES.23078.1	chr4	+	806	1	Intergenic	novelGene_18948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCACAAAAAAGGCAAGGT	NA	False	NA	NA	False	NA	NA	NA	32837696	32838502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32837700_32838500
ES.23079.1	chr4	+	173	1	Intergenic	novelGene_18949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	32846365	32846538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32846400_32846500
ES.2308.1	chr10	-	4882	3	Intergenic	novelGene_1754	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	8426477	8419966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8422861_8424350_8425171_8425309
ES.2308.2	chr10	-	5022	2	Intergenic	novelGene_1755	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	8426478	8419966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8422861_8424350
ES.2308.3	chr10	-	1226	2	Intergenic	novelGene_1758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	8426434	8419968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8421034_8426273
ES.2308.5	chr10	-	1354	2	Intergenic	novelGene_1757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	8425426	8419968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8421034_8425137
ES.2308.6	chr10	-	1225	2	Intergenic	novelGene_1756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	8422363	8419968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8421034_8422203
ES.2308.7	chr10	-	3099	2	Intergenic	novelGene_1759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGACTTCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	8426478	8421893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8422871_8424356
ES.2308.8	chr10	-	1970	1	Intergenic	novelGene_1761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACCGCAGAAGACATAGA	NA	False	NA	NA	False	NA	NA	NA	8426477	8424507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8424500_8426500
ES.23080.1	chr4	+	177	1	Intergenic	novelGene_18950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32849448	32849625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32849400_32849600
ES.23081.1	chr4	+	1479	2	Genic_Genomic	ENSMUSG00000094344.2	novel	345	1	NA	NA	-14283	191	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	32950604	32965423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_32951448_32964787
ES.23081.2	chr4	+	497	1	FSM	ENSMUSG00000094344.2	ENSMUST00000180255.2	345	1	-86	-66	-86	66	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTAAATTCTCAGCTAC	9	True	NA	60	True	AATAAA	-40	NA	32964801	32965298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32964800_32965300
ES.23082.1	chr4	-	4573	16	NNC	ENSMUSG00000040183.14	novel	4573	16	NA	NA	-20	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.97240637403475	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTTTAGTCATTAG	-2	True	NA	1	True	ATTAAA	-24	NA	32923525	32804026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32826929_32827001_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923296
ES.23082.10	chr4	-	4372	15	NIC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	6.30678287275546	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	-14	True	NA	-7	True	ATTAAA	-16	NA	32950853	32804034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ES.23082.11	chr4	-	4289	10	NNC	ENSMUSG00000040183.14	novel	4573	16	NA	NA	-1864	0	intron_retention	FALSE	canonical	0	0	junction_7	7.06233270314253	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	NA	False	NA	-7	True	ATTAAA	-16	NA	32824665	32804034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817551_32818604_32818710_32821256_32821331_32822152_32822252_32823405_32823505_32824395
ES.23082.12	chr4	-	4671	16	NNC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.70165927288111	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	NA	False	NA	-7	True	ATTAAA	-16	NA	32950894	32804034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32826929_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ES.23082.13	chr4	-	4478	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084750.8	4444	16	-36	2	-21	-2	multi-exon	FALSE	canonical	2	12	junction_10	6.1369554521947	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGTATTCTACTTTT	-23	True	NA	-9	True	ATTAAA	-14	NA	32950862	32804036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ES.23082.14	chr4	-	4537	16	NNC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	9.13941403421953	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAGTATTCTACTTTT	3	True	NA	-9	True	ATTAAA	-14	NA	32950836	32804036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32898572_32898757_32950746
ES.23082.17	chr4	-	7564	15	NNC	ENSMUSG00000040183.14	novel	4573	16	NA	NA	-1	-454	intron_retention	TRUE	non_canonical	0	0	junction_10	9.12162713733976	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTTGTTTGTAAC	17	False	NA	NA	False	NA	NA	NA	32923506	32804488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32825473_32825513_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923296
ES.23082.18	chr4	-	4034	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084750.8	4444	16	-45	455	-30	-455	multi-exon	FALSE	canonical	2	12	junction_10	6.1369554521947	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTGTGTTGTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	32950871	32804489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ES.23082.19	chr4	-	4039	15	NIC	ENSMUSG00000040183.14	novel	4573	16	NA	NA	-20	-455	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	8.03214206313913	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTGTGTTGTTTGTAA	-2	True	NA	NA	False	NA	NA	NA	32923525	32804489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923296
ES.23082.2	chr4	-	4564	16	NIC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	28	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	8.5463442476886	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTTTTTAGTCATTAG	-14	True	NA	1	True	ATTAAA	-24	NA	32923427	32804026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32874206_32874371_32923300
ES.23082.20	chr4	-	187	1	Intergenic	novelGene_18951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGGGCTATGG	6194	False	NA	NA	False	NA	NA	NA	32858414	32858227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32858200_32858400
ES.23082.21	chr4	-	178	1	Intergenic	novelGene_18952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGTT	NA	False	NA	NA	False	NA	NA	NA	32911540	32911362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32911400_32911500
ES.23082.22	chr4	-	138	1	Intergenic	novelGene_18953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	32925973	32925835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_32925800_32926000
ES.23082.23	chr4	-	2543	2	Genic_Genomic	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-12	-116667	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	32950853	32943801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_32945229_32949737
ES.23082.3	chr4	-	4719	18	NNC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	-30	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	9.07408950506996	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACTTTTTAGTCATTA	NA	False	NA	0	True	ATTAAA	-23	NA	32950871	32804027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32874206_32874371_32924643_32924703_32950746
ES.23082.4	chr4	-	7047	15	NIC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-3	6	intron_retention	FALSE	canonical	2	12	junction_10	5.96118396677323	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTACTTTTTAGTCATT	10	True	NA	-1	True	ATTAAA	-22	NA	32950829	32804028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ES.23082.5	chr4	-	4596	17	NNC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.41780107866657	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTACTTTTTAGTCAT	15	True	NA	-2	True	ATTAAA	-21	NA	32950824	32804029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860336_32860589_32874206_32874371_32950746
ES.23082.6	chr4	-	4761	17	NIC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	-20	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	8.24786904297104	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTCTACTTTTTAGTCA	-2	True	NA	-3	True	ATTAAA	-20	NA	32923525	32804030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32874206_32874371_32923296
ES.23082.7	chr4	-	4609	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084749.8	4573	16	-33	-3	-33	3	multi-exon	FALSE	canonical	0	0	junction_15	7.75857948052062	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTCTACTTTTTAGTC	NA	False	NA	-4	True	ATTAAA	-19	NA	32923538	32804031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923296
ES.23082.8	chr4	-	4633	17	NIC	ENSMUSG00000040183.14	novel	4683	17	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	7.98215783795334	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	-12	True	NA	-7	True	ATTAAA	-16	NA	32950851	32804034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32874206_32874371_32950746
ES.23082.9	chr4	-	4432	16	NNC	ENSMUSG00000040183.14	novel	4444	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.19135283208629	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	10	True	NA	-7	True	ATTAAA	-16	NA	32950829	32804034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860336_32860589_32950746
ES.23083.1	chr4	+	205	1	Intergenic	novelGene_18954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	32976653	32976858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_32976700_32976900
ES.23084.1	chr4	+	4714	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-74	368	-74	-368	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATTAAGTATGGGTTA	NA	False	NA	NA	False	ATTAAA	-26	NA	32982962	33021812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ES.23084.10	chr4	+	4106	3	NIC	ENSMUSG00000028278.15	novel	5008	7	NA	NA	-130	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	65.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	-2	True	NA	-4	True	AATAAA	-11	NA	32983323	33022172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_32983608_32995801_32996098_33018646
ES.23084.11	chr4	+	2534	9	NNC	ENSMUSG00000028278.15	novel	5055	8	NA	NA	-111	3417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.8043517259021	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAACATTTTTTAAA	17	False	NA	NA	False	ATTAAA	-15	NA	32983342	33025597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646_33018765_33023384_33023433_33024397
ES.23084.13	chr4	+	10088	6	ISM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	371	143	-46	-143	intron_retention	FALSE	canonical	3	113	junction_4	9.87927122818278	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGTACCCATAGCTTAG	28	False	NA	NA	False	NA	NA	NA	32983407	33022037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903
ES.23084.14	chr4	+	4540	6	ISM	ENSMUSG00000028278.15	ENSMUST00000029946.14	5055	8	12541	3	-9500	-3	3prime_fragment	FALSE	canonical	3	113	junction_3	10.2683981223947	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTTGAAGTGGGGTC	NA	False	NA	1	True	AATAAA	-16	NA	32995695	33022177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ES.23084.16	chr4	+	1874	2	NNC	ENSMUSG00000028278.15	novel	4295	6	NA	NA	13704	-382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATCACAGCAGTACTA	NA	False	NA	NA	False	ATTAAA	-12	NA	33018899	33021798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33019408_33020432
ES.23084.17	chr4	+	3397	2	NNC	ENSMUSG00000028278.15	novel	4295	6	NA	NA	13714	1175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATTGAACTCTTCAA	NA	False	NA	NA	False	AATAAA	-15	NA	33018909	33023355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33019374_33020422
ES.23084.2	chr4	+	5066	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-58	0	-58	0	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	NA	False	NA	4	True	AATAAA	-19	NA	32982978	33022180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ES.23084.3	chr4	+	1820	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	-49	3237	-49	125	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTGTACAATAACAG	-6	True	NA	2	True	AATAAA	-17	NA	32982987	33018943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ES.23084.4	chr4	+	3942	8	NNC	ENSMUSG00000028278.15	novel	5055	8	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.2561634062016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	14	False	NA	-4	True	AATAAA	-11	NA	32983007	33022172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646_33019353_33020439
ES.23084.5	chr4	+	3846	8	NNC	ENSMUSG00000028278.15	novel	5055	8	NA	NA	-23	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.2561634062016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	-10	True	NA	-4	True	AATAAA	-11	NA	32983013	33022172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646_33019257_33020433
ES.23084.6	chr4	+	4002	8	NNC	ENSMUSG00000028278.15	novel	5055	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.2561634062016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	-6	True	NA	4	True	AATAAA	-19	NA	32983017	33022180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646_33019408_33020432
ES.23084.7	chr4	+	4648	7	NNC	ENSMUSG00000028278.15	novel	5008	7	NA	NA	123	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	47.3723430799965	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	254	False	NA	-4	True	AATAAA	-11	NA	32983277	33022172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983497_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ES.23084.9	chr4	+	3231	7	NNC	ENSMUSG00000028278.15	novel	5008	7	NA	NA	-148	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.291433508458	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	10	True	NA	-4	True	AATAAA	-11	NA	32983305	33022172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_32983608_32995801_32996098_33004150_33004208_33007134_33007213_33012903_33013053_33018646_33019263_33020439
ES.23085.1	chr4	-	250	1	Intergenic	novelGene_18955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	33006221	33005971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33006000_33006200
ES.23086.1	chr4	-	178	1	Intergenic	novelGene_18956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	33011627	33011449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33011400_33011600
ES.23087.1	chr4	+	3896	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	-368	2	-368	-2	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTACTGGTGTTAC	NA	False	NA	26	True	AATAAA	-36	NA	33031047	33052361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ES.23087.2	chr4	+	3445	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-38	-3	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATTTACTGGTGTTA	-70	True	NA	25	True	AATAAA	-35	NA	33031377	33052360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
ES.23087.3	chr4	+	1082	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-7	-2335	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATTGTTTACAAAAAGAT	-39	True	NA	24	True	ATTAAA	-24	NA	33031408	33050028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
ES.23087.5	chr4	+	1174	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	20	2336	20	-2336	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTGTTTACAAAAAGA	-12	True	NA	23	True	ATTAAA	-23	NA	33031435	33050027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ES.23087.6	chr4	+	4756	6	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	-51	-9	intron_retention	FALSE	canonical	3	36	junction_5	30.7896086366813	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAAGTTATTTACTG	29	True	NA	19	True	AATAAA	-29	NA	33031476	33052354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33031617_33036708_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
ES.23087.7	chr4	+	3061	1	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	10316	-2259	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACATTCAGGCTGTGGTC	1862	False	NA	100	True	TATAAA	-16	NA	33047043	33050104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33047000_33050100
ES.23088.1	chr4	-	176	1	Intergenic	novelGene_18957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATATAA	NA	False	NA	NA	False	NA	NA	NA	33141615	33141439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33141400_33141600
ES.23089.1	chr4	+	1126	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19809	759	19809	-759	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCTTACATTTTATTCA	NA	False	NA	NA	False	GATAAA	-21	NA	33152329	33162829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ES.23089.2	chr4	+	1044	5	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19822	1586	19822	-1586	internal_fragment	FALSE	canonical	3	14	junction_2	4.7169905660283	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTTTATGTGCATT	NA	False	NA	NA	False	NA	NA	NA	33152342	33162002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629
ES.23089.3	chr4	+	1866	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19826	2	19826	-2	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGATGTCATCACTGA	NA	False	NA	6	True	AATAAA	-13	NA	33152346	33163586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ES.2309.1	chr10	+	4308	2	Antisense	novelGene_ENSMUSG00000065692.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8690583	8701649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_8693158_8699915
ES.2309.2	chr10	+	6659	2	Antisense	novelGene_ENSMUSG00000065692.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8691140	8701619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_8696106_8699925
ES.23090.1	chr4	-	181	1	Intergenic	novelGene_18958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATAGCCAGA	1930	False	NA	NA	False	NA	NA	NA	33170082	33169901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33169900_33170100
ES.23091.1	chr4	-	5209	8	NNC	ENSMUSG00000054659.14	novel	1445	7	NA	NA	210	3836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.1940358713779	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTGTTTATCTAAT	209	False	NA	NA	False	ATTAAA	-22	NA	33189223	33170393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33183680_33183819_33187047_33187197_33188930
ES.23091.2	chr4	-	5578	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	-297	-3836	7	3836	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTGTTTATCTAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	33189730	33170393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
ES.23091.3	chr4	-	4046	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	14	-2615	14	2615	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATATTATGTAATC	13	True	NA	NA	False	ATTAAA	-19	NA	33189419	33171614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
ES.23091.4	chr4	-	2010	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	-232	-333	72	333	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATCCCCAGTACAAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	33189665	33173896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
ES.23091.5	chr4	-	1959	8	NNC	ENSMUSG00000054659.14	novel	1445	7	NA	NA	62	332	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.53766054758453	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATCCCCAGTACAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	33189675	33173897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_33174181_33174240_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
ES.23092.1	chr4	-	964	1	Intergenic	novelGene_18959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTGTTTCAACGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	33193621	33192657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33192700_33193600
ES.23093.1	chr4	+	3077	5	NNC	ENSMUSG00000054679.9	novel	829	5	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.24264068711928	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTGATGTGCTGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	33209006	33233341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33209371_33223567_33223673_33225764_33225869_33226027_33226174_33230983
ES.23093.2	chr4	+	2876	5	FSM	ENSMUSG00000054679.9	ENSMUST00000108159.2	829	5	3	-2050	3	3	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGTGCTGTCCTGA	-24	True	NA	NA	False	AATAAA	-16	NA	33209265	33233343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33209371_33223567_33223673_33225764_33225869_33226027_33226170_33230923
ES.23093.3	chr4	+	2965	4	NNC	ENSMUSG00000054679.9	novel	829	5	NA	NA	11	1	intron_retention	FALSE	canonical	1	1	junction_3	4.24264068711928	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTGATGTGCTGTCCT	-16	True	NA	NA	False	AATAAA	-14	NA	33209273	33233341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33209371_33223567_33223673_33225764_33226170_33230983
ES.23093.4	chr4	+	3019	4	NIC	ENSMUSG00000054679.9	novel	829	5	NA	NA	15	-1	intron_retention	FALSE	canonical	3	8	junction_3	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTTTGATGTGCTGTC	-12	True	NA	NA	False	AATAAA	-12	NA	33209277	33233339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33209371_33223567_33223673_33225764_33226170_33230923
ES.23094.1	chr4	-	1699	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	-57	6	-57	-6	multi-exon	FALSE	canonical	3	146	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTAGTCTTGGCTTTTTG	170	False	NA	-4	True	TTTAAA	-32	NA	33248567	33245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_33246508_33247947
ES.23094.2	chr4	-	2378	1	NIC	ENSMUSG00000040128.10	novel	1648	2	NA	NA	-238	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTAAGGTAGTCTTGG	924	False	NA	-11	True	TTTAAA	-25	NA	33247813	33245435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_33245400_33247800
ES.23094.3	chr4	-	1229	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	2	417	2	164	multi-exon	FALSE	canonical	3	146	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTTGCCCTGCAGCT	1	True	NA	NA	False	NA	NA	NA	33248508	33245839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_33246508_33247947
ES.23095.1	chr4	+	276	1	Intergenic	novelGene_18960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAAATTTAAACC	5165	False	NA	NA	False	AATACA	-22	NA	33265731	33266007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_33265700_33266000
ES.23096.1	chr4	+	177	1	Antisense	novelGene_ENSMUSG00000086127.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	33304805	33304982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_33304800_33305000
ES.23097.1	chr4	-	1636	2	NNC	ENSMUSG00000086127.2	novel	1536	2	NA	NA	947	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTGAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	33309190	33303501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_33304979_33309031
ES.23098.1	chr4	+	4605	18	NNC	ENSMUSG00000028274.18	novel	783	6	NA	NA	-1030	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	118.303082703548	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTTCCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	33309280	33502613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33309650_33309929_33310040_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.10	chr4	+	3965	14	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	83.3269741163365	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-12	True	NA	11	True	AATAAA	-18	NA	33310334	33502614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33498950_33499075_33500237
ES.23098.12	chr4	+	2616	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	92.7669922103223	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-11	True	NA	13	True	ATTAAA	-26	NA	33310335	33500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.13	chr4	+	4459	19	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	128.241525602626	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACACCTGTGTCTTTCC	-11	True	NA	4	True	AATAAA	-11	NA	33310335	33502607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33389078_33389172_33392714_33392772_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.15	chr4	+	4065	16	FSM	ENSMUSG00000028274.18	ENSMUST00000029942.8	2379	16	8	-1694	8	-6	multi-exon	FALSE	canonical	1	3	junction_15	78.2297471128044	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACCTGTGTCTTTCCT	-11	True	NA	5	True	AATAAA	-12	NA	33310335	33502608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500298
ES.23098.16	chr4	+	3539	11	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	9	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	90.4670658306104	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACACCTGTGTCTTTCC	-10	True	NA	4	True	AATAAA	-11	NA	33310336	33502607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.18	chr4	+	3195	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	28	934	11	766	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGCAGGCTAAGGATCT	-8	True	NA	NA	False	AATGAA	-15	NA	33310338	33501680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.2	chr4	+	4196	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	-39	0	-39	0	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	NA	False	NA	11	True	AATAAA	-18	NA	33310271	33502614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.20	chr4	+	2323	15	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	80.2962944223405	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-3	True	NA	13	True	ATTAAA	-26	NA	33310343	33500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33443600_33443668_33498950_33499075_33500237
ES.23098.22	chr4	+	4202	15	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	16	-3	intron_retention	FALSE	canonical	3	214	junction_11	35.2128368290744	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	-3	True	NA	8	True	AATAAA	-15	NA	33310343	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33320518_33320629_33324873_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.24	chr4	+	4637	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	34	-514	17	514	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGAGCATCCTAC	-2	True	NA	NA	False	NA	NA	NA	33310344	33503128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.25	chr4	+	3545	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	99.6813673662235	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAGAAGTTCTTCTGG	-2	True	NA	8	True	ATTAAA	-21	NA	33310344	33500909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33472438_33473566_33498950_33499075_33500237
ES.23098.28	chr4	+	4382	19	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.780170813234	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTGTGTCTTTCCTGT	-2	True	NA	7	True	AATAAA	-14	NA	33310344	33502610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33348086_33348131_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33392736_33392772_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.29	chr4	+	2349	16	FSM	ENSMUSG00000028274.18	ENSMUST00000029942.8	2379	16	19	11	19	-11	multi-exon	FALSE	canonical	1	3	junction_15	78.2297471128044	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCATTTTAAGAAGTTC	0	True	NA	2	True	ATTAAA	-15	NA	33310346	33500903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500298
ES.23098.3	chr4	+	2456	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	1	1700	1	0	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-35	True	NA	13	True	ATTAAA	-26	NA	33310311	33500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.30	chr4	+	2549	13	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	19	33928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	86.7294644281861	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGGTACTGCTGCTTA	0	True	NA	NA	False	AATAAA	-29	NA	33310346	33391984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33390887
ES.23098.31	chr4	+	4734	20	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	132.558020537666	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACCTGTGTCTTTCCTG	2	True	NA	6	True	AATAAA	-13	NA	33310348	33502609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33450355_33450547_33472438_33472559_33473440_33473566_33498950_33499075_33500237
ES.23098.33	chr4	+	3808	13	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	26	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	82.6387721754545	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	7	True	NA	8	True	AATAAA	-15	NA	33310353	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.34	chr4	+	3854	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.3990346797654	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACACCTGTGTCTTTCCT	8	True	NA	5	True	AATAAA	-12	NA	33310354	33502608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237_33500991_33501243
ES.23098.35	chr4	+	4639	18	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.665071325065	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	12	True	NA	8	True	AATAAA	-15	NA	33310358	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33324095_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33389078_33389172_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.36	chr4	+	2491	16	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	113.696007943209	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	13	True	NA	13	True	ATTAAA	-26	NA	33310359	33500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33443600_33443668_33498950_33499075_33500237
ES.23098.37	chr4	+	2553	16	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	32	-13	intron_retention	FALSE	canonical	1	1	junction_13	99.7716058472215	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATACCATTTTAAGAAGT	13	True	NA	0	True	ATTAAA	-13	NA	33310359	33500901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33408099_33408177_33443600_33443668_33498950_33499075_33500237
ES.23098.38	chr4	+	4069	16	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.7703836053458	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTTCCTGTCTC	19	True	NA	10	True	AATAAA	-17	NA	33310365	33502613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330873_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.39	chr4	+	1701	1	Intergenic	novelGene_18961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGATGAGATATAATTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	33332532	33334233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_33332500_33334200
ES.23098.4	chr4	+	2000	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	2	2155	2	-455	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGAGCGGCTTCGT	-34	True	NA	NA	False	AAGAAA	-36	NA	33310312	33500459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.41	chr4	+	4545	1	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	31754	9256	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCTACAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	33362767	33367312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33362800_33367300
ES.23098.42	chr4	+	3328	4	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	93180	3	72477	-3	3prime_fragment	FALSE	canonical	3	268	junction_3	7.78888096369861	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	NA	False	NA	8	True	AATAAA	-15	NA	33403490	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.43	chr4	+	678	1	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	169223	0	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	NA	False	NA	13	True	ATTAAA	-26	NA	33500236	33500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33500200_33500900
ES.23098.5	chr4	+	4329	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	92.7669922103223	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTTTCCTGTCT	-26	True	NA	9	True	AATAAA	-16	NA	33310320	33502612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.7	chr4	+	5265	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	99.6813673662235	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	-20	True	NA	8	True	AATAAA	-15	NA	33310326	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33472438_33473566_33498950_33499075_33500237
ES.23098.8	chr4	+	4121	15	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	80.6046030994281	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTTCCTGTCTC	-18	True	NA	10	True	AATAAA	-17	NA	33310328	33502613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33310525_33320518_33320629_33324873_33325148_33329519_33329596_33330939_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23098.9	chr4	+	4020	15	NIC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.6438500899025	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTTCCTGTC	-12	True	NA	8	True	AATAAA	-15	NA	33310334	33502611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_33310525_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ES.23099.1	chr4	-	4943	1	Antisense	novelGene_ENSMUSG00000028274.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCCTACCCTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	33323505	33318562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_33318600_33323500
ES.231.1	chr1	+	187	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAATTCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33888540	33888727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33888500_33888700
ES.2310.1	chr10	+	1326	6	Antisense	novelGene_ENSMUSG00000015305.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAATTTTGCCCAGTTG	NA	False	NA	NA	False	NA	NA	NA	8709787	8718560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_8709809_8710868_8710979_8712317_8712419_8713634_8713739_8714342_8714449_8717676
ES.23100.1	chr4	-	2442	1	Intergenic	novelGene_18962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGGTGGTGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	33344958	33342516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33342500_33345000
ES.23101.1	chr4	-	213	1	Intergenic	novelGene_18963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTCTCCTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	33364918	33364705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33364700_33364900
ES.23102.1	chr4	-	6687	1	Intergenic	novelGene_18964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33451940	33445253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33445300_33451900
ES.23102.2	chr4	-	189	1	Intergenic	novelGene_18965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTGCTTCTCCTCAA	NA	False	NA	NA	False	NA	NA	NA	33447843	33447654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_33447700_33447800
ES.23103.1	chr4	+	178	1	Intergenic	novelGene_18966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGGAGACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	33524196	33524374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_33524200_33524400
ES.23104.1	chr4	+	1973	12	Antisense	novelGene_ENSMUSG00002075451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.287479787288034	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTGTTCATGTCATAT	NA	False	NA	NA	False	GATAAA	-19	NA	33532792	33629899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_33532954_33534357_33534424_33553701_33553846_33555293_33555499_33555933_33556029_33575287_33575442_33577758_33577849_33602841_33603021_33612893_33612988_33613131_33613278_33621414_33621489_33629334
ES.23104.2	chr4	+	179	1	Intergenic	novelGene_18967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGACTTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	33624259	33624438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_33624300_33624400
ES.23105.1	chr4	+	173	1	Intergenic	novelGene_18968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTAAGAAAAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33685510	33685683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_33685500_33685700
ES.23106.1	chr4	+	2889	4	NNC	ENSMUSG00000044288.7	novel	757	3	NA	NA	-744	-2700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTGTGTATGTGTG	-2	True	NA	NA	False	AGTAAA	-23	NA	33923848	33946119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33923986_33935211_33935330_33935913_33935980_33943551
ES.23106.2	chr4	+	2618	2	NNC	ENSMUSG00000044288.7	novel	5807	2	NA	NA	-335	-2772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCAGTTGTCTTCTTC	230	False	NA	NA	False	NA	NA	NA	33924257	33946047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_33924380_33943551
ES.23106.3	chr4	+	5795	2	FSM	ENSMUSG00000044288.7	ENSMUST00000057188.7	5807	2	12	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTTGAATTCTGCCT	0	True	NA	NA	False	AATAAA	-28	NA	33924643	33948831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_33925159_33943551
ES.23107.1	chr4	+	193	1	Intergenic	novelGene_18969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGCCTGGCTCAA	NA	False	NA	NA	False	NA	NA	NA	34179103	34179296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34179100_34179300
ES.23107.2	chr4	+	329	1	Intergenic	novelGene_18970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGATGGAGACTAAC	NA	False	NA	NA	False	NA	NA	NA	34179104	34179433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34179100_34179400
ES.23108.1	chr4	-	176	1	Intergenic	novelGene_18971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGTGG	NA	False	NA	NA	False	NA	NA	NA	34510855	34510679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34510700_34510900
ES.23109.1	chr4	+	3553	1	Intergenic	novelGene_18972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	34515662	34519215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34515700_34519200
ES.2311.1	chr10	+	177	1	Intergenic	novelGene_1764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8744145	8744322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_8744100_8744300
ES.23110.1	chr4	-	176	1	Intergenic	novelGene_18973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	34530813	34530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34530600_34530800
ES.23111.1	chr4	-	6621	1	Intergenic	novelGene_18974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	9620	False	NA	NA	False	NA	NA	NA	34541822	34535201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34535200_34541800
ES.23112.1	chr4	+	207	1	Intergenic	novelGene_18975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAAGGCATTCTCCCAGT	NA	False	NA	NA	False	NA	NA	NA	34547475	34547682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34547500_34547700
ES.23113.1	chr4	+	1449	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-389	337	-389	-337	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTTAGTGTGATTTT	NA	False	NA	19	True	AATAAA	-20	NA	34550547	34566571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.10	chr4	+	1826	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-355	-74	-355	74	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAACACAAAGTTAGTT	NA	False	NA	23	True	AATAAA	-30	NA	34550581	34566982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.11	chr4	+	1268	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-341	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAAGTTAGTGTGATTT	-29	True	NA	18	True	AATAAA	-19	NA	34550595	34566570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34550778_34550909_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.12	chr4	+	4405	4	NIC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-336	0	intron_retention	FALSE	canonical	3	720	junction_1	44.392191505564	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-24	True	NA	13	True	AATAAA	-14	NA	34550600	34566908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34551274_34562311_34565278_34565933_34566006_34566214
ES.23113.13	chr4	+	4928	2	FSM	ENSMUSG00000028291.8	ENSMUST00000132230.2	781	2	-349	-3798	-335	-341	multi-exon	FALSE	canonical	3	720	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATGAAGTTAGTGTGA	-23	True	NA	15	True	AATAAA	-16	NA	34550601	34566567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311
ES.23113.14	chr4	+	3940	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-331	-2212	-331	2212	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCCTTGCCTCTCTTC	-19	True	NA	NA	False	CATAAA	-17	NA	34550605	34569120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.15	chr4	+	1686	5	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-327	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	339.930875326146	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCCTGTTTCCGAAT	-15	True	NA	11	True	AATAAA	-12	NA	34550609	34566906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34551274_34562311_34562456_34565163_34565278_34565933_34566006_34566214
ES.23113.16	chr4	+	4108	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-322	-2389	-322	2389	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGTCAGGAAGTTTATT	-10	True	NA	NA	False	AATAAA	-13	NA	34550614	34569297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.17	chr4	+	2035	4	NIC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-322	-340	intron_retention	FALSE	canonical	3	720	junction_1	43.9267066322477	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGAAGTTAGTGTGAT	-10	True	NA	16	True	AATAAA	-17	NA	34550614	34566568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34551274_34562311_34562456_34565127_34566006_34566214
ES.23113.18	chr4	+	1579	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-322	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCCTGTTTCCGAAT	-10	True	NA	11	True	AATAAA	-12	NA	34550614	34566906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34550770_34550907_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.19	chr4	+	4261	3	NIC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-321	-338	intron_retention	FALSE	canonical	3	720	junction_1	37	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAAGTTAGTGTGATTT	-9	True	NA	18	True	AATAAA	-19	NA	34550615	34566570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34551274_34562311_34565278_34565933
ES.23113.2	chr4	+	1645	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-377	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTTTCCGAATTGTAC	NA	False	NA	16	True	AATAAA	-17	NA	34550559	34566911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34550778_34550909_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.20	chr4	+	1922	4	ISM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-319	3	-319	-3	intron_retention	FALSE	canonical	3	720	junction_1	30.2103734943259	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTGCCTGTTTCCGAA	-7	True	NA	10	True	AATAAA	-11	NA	34550617	34566905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933
ES.23113.21	chr4	+	4048	4	NIC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-319	-340	intron_retention	FALSE	canonical	3	720	junction_1	44.392191505564	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGAAGTTAGTGTGAT	-7	True	NA	16	True	AATAAA	-17	NA	34550617	34566568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34551274_34562311_34565278_34565933_34566006_34566214
ES.23113.23	chr4	+	3376	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-310	-1669	-310	1669	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTAAGTTGAGTATTT	2	True	NA	NA	False	NA	NA	NA	34550626	34568577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.24	chr4	+	6332	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-310	-4625	-310	4625	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCTTTCTTTAAATTT	2	True	NA	NA	False	AATACA	-17	NA	34550626	34571533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.25	chr4	+	1588	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-289	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTGTTTCCGAATT	23	True	NA	12	True	AATAAA	-13	NA	34550647	34566907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34551087_34551183_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.26	chr4	+	4289	2	ISM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	14995	-3521	14981	3521	3prime_fragment	FALSE	canonical	3	826	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTGATTCTTAAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	34565931	34570429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_34566006_34566214
ES.23113.27	chr4	+	3636	1	Antisense	novelGene_ENSMUSG00000040044.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGGATTCATTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	34569712	34573348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_34569700_34573300
ES.23113.3	chr4	+	4086	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-375	2393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGGAAGTTTATTTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	34550561	34569301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34551087_34551165_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.4	chr4	+	5296	2	FSM	ENSMUSG00000028291.8	ENSMUST00000132230.2	781	2	-377	-4138	-363	-1	multi-exon	FALSE	canonical	3	720	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTGTTTCCGAATT	NA	False	NA	12	True	AATAAA	-13	NA	34550573	34566907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311
ES.23113.5	chr4	+	1279	6	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-363	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.730396336321	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAAGTTAGTGTGATTT	NA	False	NA	18	True	AATAAA	-19	NA	34550573	34566570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34550778_34550920_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.6	chr4	+	1457	3	NNC	ENSMUSG00000028291.8	novel	1397	5	NA	NA	-359	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	360	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCCTGTTTCCGAAT	NA	False	NA	11	True	AATAAA	-12	NA	34550577	34566906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34551274_34562311_34562381_34566214
ES.23113.7	chr4	+	5291	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-358	-3536	-358	3536	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCTTGTCATGAAAGA	NA	False	NA	NA	False	ATTAAA	-26	NA	34550578	34570444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.8	chr4	+	1971	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-356	-218	-356	218	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTTTGATTTTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	34550580	34567126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23113.9	chr4	+	6008	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	-356	-4255	-356	4255	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCTATTGGAAGATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	34550580	34571163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ES.23114.1	chr4	+	4170	1	Antisense	novelGene_ENSMUSG00000040044.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTTGTTTTGATTCA	NA	False	NA	NA	False	AATAAA	-14	NA	34574623	34578793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_34574600_34578800
ES.23114.2	chr4	+	4957	1	Antisense	novelGene_ENSMUSG00000040044.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGGTATTTATTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	34575746	34580703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_34575700_34580700
ES.23115.1	chr4	-	3256	1	Antisense	novelGene_ENSMUSG00000028291.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGTATTCAGTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	34568529	34565273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_34565300_34568500
ES.23115.10	chr4	-	3750	19	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	2	796	intron_retention	FALSE	canonical	3	292	junction_5	94.3658660039035	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGGTGCCTGGCACTTA	17	True	NA	0	True	TATAAA	-14	NA	34614891	34569999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.11	chr4	-	3070	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	23	-793	-8	793	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGAGGTGCCTGGCAC	-13	True	NA	-3	True	ATTAAA	-44	NA	34614921	34570002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.13	chr4	-	3014	20	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	1	764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	206.616188396455	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTGGTATCCTATAAAA	16	True	NA	-32	True	ATTAAA	-15	NA	34614892	34570031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578042_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597435_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.14	chr4	-	2980	20	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-4	762	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	168.661686647965	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTTGGTATCCTATAA	11	True	NA	-34	True	ATTAAA	-13	NA	34614897	34570033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34570987_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.15	chr4	-	2904	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	21	-625	-10	625	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGGCATATTTTTATC	-15	True	NA	NA	False	TATAAA	-20	NA	34614923	34570170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.17	chr4	-	8088	7	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	5325	0	intron_retention	FALSE	canonical	3	324	junction_2	127.618463484804	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	False	NA	-17	True	CATAAA	-21	NA	34589863	34570795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34572573_34575031_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948
ES.23115.18	chr4	-	4919	18	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	292	junction_5	97.4271797976406	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	11	True	NA	-17	True	CATAAA	-21	NA	34614897	34570795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.19	chr4	-	2162	19	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_17	169.551123067154	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	0	True	NA	-18	True	CATAAA	-20	NA	34614908	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34611021_34611077_34614864
ES.23115.2	chr4	-	4163	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-1	5521	intron_retention	FALSE	canonical	3	20	junction_1	162.441193280024	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTGTATTCAGTATT	-6	True	NA	NA	False	AATAAA	-16	NA	34614914	34565274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.20	chr4	-	2288	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	11	1	11	-1	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	NA	False	NA	-18	True	CATAAA	-20	NA	34614933	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.21	chr4	-	5863	17	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	324	junction_5	93.4515248671738	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	16	True	NA	-18	True	CATAAA	-20	NA	34614892	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.22	chr4	-	5111	12	NIC	ENSMUSG00000040044.12	novel	1750	14	NA	NA	-55	-1	intron_retention	FALSE	canonical	3	292	junction_4	115.938356376735	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	NA	False	NA	-18	True	CATAAA	-20	NA	34598675	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307
ES.23115.23	chr4	-	3434	19	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	292	junction_6	94.7160799572551	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-8	True	NA	-18	True	CATAAA	-20	NA	34614916	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.24	chr4	-	2427	21	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	243.732107035573	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	7	True	NA	-18	True	CATAAA	-20	NA	34614901	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586524_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34598982_34599141_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.26	chr4	-	5741	16	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	292	junction_4	101.380603009978	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-2	True	NA	-18	True	CATAAA	-20	NA	34614910	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.28	chr4	-	2259	20	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.876181077592	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	5	True	NA	-18	True	CATAAA	-20	NA	34614903	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585687_34586436_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.29	chr4	-	3139	7	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	32759	1	-5258	-1	3prime_fragment	FALSE	canonical	3	292	junction_6	146.914563229412	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	4914	False	NA	-18	True	CATAAA	-20	NA	34582154	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742
ES.23115.3	chr4	-	4133	2	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	42854	-3579	4837	3579	3prime_fragment	FALSE	canonical	3	672	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTGTGTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	34572059	34567216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34571019_34571728
ES.23115.31	chr4	-	4397	18	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_11	175.82843950399	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-2	True	NA	-18	True	CATAAA	-20	NA	34614910	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587102_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.32	chr4	-	2234	20	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	166.92740638604	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-1	True	NA	-18	True	CATAAA	-20	NA	34614909	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587053_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.33	chr4	-	2345	21	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	205.741245257241	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	15	True	NA	-18	True	CATAAA	-20	NA	34614893	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34610361_34610459_34611021_34611077_34614864
ES.23115.34	chr4	-	2262	20	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	166.794348137571	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	22	True	NA	-18	True	CATAAA	-20	NA	34614886	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598586_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.35	chr4	-	2292	20	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	165.679545844855	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	-16	True	NA	-18	True	CATAAA	-20	NA	34614924	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571032_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.39	chr4	-	3602	18	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	-1	intron_retention	FALSE	canonical	1	5	junction_13	174.716260337433	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	15	True	NA	-18	True	CATAAA	-20	NA	34614893	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.4	chr4	-	3707	19	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	3	3579	intron_retention	FALSE	canonical	3	20	junction_1	169.926718046848	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTGTGTGGGGTT	8	True	NA	NA	False	NA	NA	NA	34614900	34567216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.40	chr4	-	4258	17	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	2	-1	intron_retention	FALSE	canonical	3	13	junction_15	178.809780213499	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTTCATTCTTGC	17	True	NA	-18	True	CATAAA	-20	NA	34614891	34570796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34611021_34611077_34614864
ES.23115.41	chr4	-	4409	18	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	324	junction_6	90.7034408765798	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATTGCTTCATTCTTG	NA	False	NA	-19	True	CATAAA	-19	NA	34614942	34570797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.45	chr4	-	3811	19	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_11	219.796939115276	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATTGCTTCATTCTTG	17	True	NA	-19	True	CATAAA	-19	NA	34614891	34570797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587102_34593060_34593175_34595076_34595237_34597307_34599141_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.46	chr4	-	2972	19	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	-3	intron_retention	FALSE	canonical	3	324	junction_5	87.9417771758082	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACATTGCTTCATTCTT	-1	True	NA	-20	True	CATAAA	-18	NA	34614909	34570798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.47	chr4	-	3210	19	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	170.283142927984	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACATTGCTTCATTCTT	-8	True	NA	-20	True	CATAAA	-18	NA	34614916	34570798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571013_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.48	chr4	-	2354	21	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.651681366976	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACATTGCTTCATTCT	2	True	NA	-21	True	CATAAA	-17	NA	34614906	34570799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577218_34577315_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.5	chr4	-	2211	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-1	3578	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGCTTTGTGTGGGGT	3	True	NA	NA	False	NA	NA	NA	34614905	34567217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.51	chr4	-	3928	19	NNC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-4	-6	intron_retention	FALSE	canonical	0	0	junction_5	170.958887917606	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATACATTGCTTCATT	11	True	NA	-23	True	CATAAA	-15	NA	34614897	34570801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577218_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.52	chr4	-	4299	17	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	2	-6	intron_retention	FALSE	canonical	3	9	junction_16	176.04686875943	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATACATTGCTTCATT	17	True	NA	-23	True	CATAAA	-15	NA	34614891	34570801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34614864
ES.23115.53	chr4	-	2206	20	NNC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	168.852801866184	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	-9	True	NA	-24	True	CATAAA	-14	NA	34614917	34570802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605625_34607130_34607229_34611021_34611077_34614864
ES.23115.54	chr4	-	5265	6	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	-5888	-8	intron_retention	FALSE	canonical	3	292	junction_5	160.761438162266	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGTATACATTGCTTCA	4284	False	NA	-25	True	CATAAA	-13	NA	34582784	34570803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34578030_34579742
ES.23115.55	chr4	-	2234	19	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	4	772	4	-3	5prime_fragment	FALSE	canonical	3	324	junction_5	87.9417771758082	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGTTAAAAAATAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	34614940	34571567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.56	chr4	-	6782	8	ISM	ENSMUSG00000040044.12	ENSMUST00000156987.8	3089	14	-13	10822	-11	3608	5prime_fragment	FALSE	canonical	3	640	junction_2	33.5236742421513	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTAACCTGTAGCCTC	-16	True	NA	NA	False	AATAGA	-44	NA	34614924	34588464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34593175_34595076_34595237_34597307_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.57	chr4	-	7719	7	NIC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-11	3598	intron_retention	FALSE	canonical	3	640	junction_2	35.3431590111706	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCACAGTAAC	-16	True	NA	NA	False	AATAGA	-34	NA	34614924	34588474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34593175_34595076_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.58	chr4	-	9604	6	NIC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	0	3596	intron_retention	FALSE	canonical	3	640	junction_1	26.7327514483639	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCACAGTA	-1	True	NA	NA	False	AATAGA	-32	NA	34614909	34588476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34595237_34597307_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.59	chr4	-	8424	7	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	-11	3567	intron_retention	FALSE	canonical	3	637	junction_2	27.2274371422162	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AATAGA	-3	NA	34614924	34588505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34595237_34597307_34597442_34598607_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.6	chr4	-	3770	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	28	-1498	-3	1498	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAGTATTTTATTGT	-8	True	NA	NA	False	AATAAA	-15	NA	34614916	34569297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.60	chr4	-	4372	9	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	4	18898	0	2379	5prime_fragment	FALSE	canonical	3	637	junction_3	34.1458269778314	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGTTCTGCCATTCA	-1	True	NA	NA	False	ATTAAA	-17	NA	34614909	34589693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.61	chr4	-	3975	9	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	-11	19310	-11	1967	5prime_fragment	FALSE	canonical	3	637	junction_3	34.1458269778314	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	-16	True	NA	NA	False	NA	NA	NA	34614924	34590105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.62	chr4	-	3402	10	NIC	ENSMUSG00000040044.12	novel	838	7	NA	NA	1	1967	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	211.066077068033	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	-4	True	NA	NA	False	NA	NA	NA	34614912	34590105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34592500_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.63	chr4	-	3655	5	NIC	ENSMUSG00000040044.12	novel	838	7	NA	NA	-375	1966	intron_retention	FALSE	canonical	0	0	junction_4	293.665094112324	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	34599126	34590106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34598982
ES.23115.64	chr4	-	4896	1	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	185	1965	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	34595003	34590107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34590100_34595000
ES.23115.66	chr4	-	3347	9	NNC	ENSMUSG00000040044.12	novel	838	7	NA	NA	3817	1962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	292.649107294042	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	3832	False	NA	NA	False	NA	NA	NA	34611076	34590110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34592500_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598750_34599698_34599809_34605536_34605682_34607130_34607229_34611021
ES.23115.67	chr4	-	3646	7	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	3857	-164	intron_retention	FALSE	canonical	3	637	junction_2	27.2238661635134	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	3872	False	NA	NA	False	NA	NA	NA	34611036	34592236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021
ES.23115.68	chr4	-	3726	2	ISM	ENSMUSG00000040044.12	ENSMUST00000154858.2	771	5	0	8015	0	-8015	5prime_fragment	FALSE	canonical	3	667	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACAAACAAA	4	True	NA	NA	False	NA	NA	NA	34614904	34607390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34611077_34614864
ES.23115.7	chr4	-	4453	19	NIC	ENSMUSG00000040044.12	novel	2266	20	NA	NA	1	1498	intron_retention	FALSE	canonical	3	292	junction_5	94.3658660039035	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAGTATTTTATTGT	16	True	NA	NA	False	AATAAA	-15	NA	34614892	34569297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.8	chr4	-	3913	21	NIC	ENSMUSG00000040044.12	novel	2300	20	NA	NA	0	1496	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	207.0841857796	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCTGAGTATTTTATT	5	True	NA	NA	False	AATAAA	-13	NA	34614903	34569299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34598982_34599141_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23115.9	chr4	-	3311	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	-7	1493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.223925146846	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAAACCTGAGTATTTT	-12	True	NA	NA	False	AATAAA	-10	NA	34614920	34569302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34570564_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ES.23116.1	chr4	+	1879	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	-13	2	-13	2	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-25	True	NA	10	True	AATAGA	-25	NA	34614943	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.10	chr4	+	2890	10	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	-11599	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	270.650017732801	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGTGGTGTTCTACT	-7	True	NA	NA	False	AGTAAA	-21	NA	34614961	34644578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34642432
ES.23116.11	chr4	+	1231	2	FSM	ENSMUSG00000028292.15	ENSMUST00000149620.2	434	2	3	-800	3	800	multi-exon	FALSE	canonical	3	576	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	34614963	34619721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34615027_34618553
ES.23116.13	chr4	+	1952	21	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	203.729544985503	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-5	True	NA	10	True	AATAGA	-25	NA	34614963	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34615468_34615562_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.14	chr4	+	5530	18	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	3	1	intron_retention	FALSE	canonical	3	576	junction_1	47.6816867633178	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	-5	True	NA	9	True	AATAGA	-24	NA	34614963	34660164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.15	chr4	+	1936	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	205.749331712159	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-4	True	NA	10	True	AATAGA	-25	NA	34614964	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34622898_34622977_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.17	chr4	+	1436	15	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	-1169	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	207.629428530343	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTAGTCCAGTTGTTTG	0	True	NA	NA	False	NA	NA	NA	34614968	34655008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809
ES.23116.18	chr4	+	2104	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	240.492099662338	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	0	True	NA	8	True	AATAGA	-23	NA	34614968	34660163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34616469_34616726_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652135_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.2	chr4	+	4799	1	Genic_Genomic	ENSMUSG00000028292.15	novel	NA	NA	NA	NA	-6	828	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAGAAGAAATTA	-18	True	NA	NA	False	NA	NA	NA	34614950	34619749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_34615000_34619700
ES.23116.20	chr4	+	3444	10	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	12	11009	0	-7019	intron_retention	FALSE	canonical	3	576	junction_1	61.1533187575436	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATGTCTAAGAGATAC	0	True	NA	NA	False	AATGAA	-11	NA	34614968	34649158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507
ES.23116.23	chr4	+	2201	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	243	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATCTCATGGAAGCTA	1	True	NA	NA	False	NA	NA	NA	34614969	34660410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.24	chr4	+	1990	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	-62	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	202.872244281962	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTAGTTGTTATCAGAT	1	True	NA	19	True	GATAAA	-20	NA	34614969	34660101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34616524_34616726_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.26	chr4	+	3331	18	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-2	2	intron_retention	FALSE	non_canonical	0	0	junction_6	166.706069160093	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	3	True	NA	10	True	AATAGA	-25	NA	34614971	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636945_34637036_34639244_34639322_34645696_34645856_34646507_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34657242_34659490_34659555_34659983
ES.23116.27	chr4	+	5182	17	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-1	1	intron_retention	FALSE	canonical	3	576	junction_1	50.6568958163644	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	4	True	NA	9	True	AATAGA	-24	NA	34614972	34660164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34654935_34656005_34656074_34656152_34656263_34656767_34657242_34659490
ES.23116.29	chr4	+	1909	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	157.257943970498	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	6	True	NA	10	True	AATAGA	-25	NA	34614974	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659616_34659983
ES.23116.3	chr4	+	1837	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_19	152.829128055719	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTGTAGTAGTG	-17	True	NA	6	True	AATAGA	-21	NA	34614951	34660161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659525_34659983
ES.23116.30	chr4	+	6116	14	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	-64	intron_retention	FALSE	canonical	0	0	junction_5	189.327711253585	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTAGTTGTTATCAG	6	True	NA	17	True	GATAAA	-18	NA	34614974	34660099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34645696_34645856_34646507_34650252_34652131_34652209_34654809_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.31	chr4	+	1832	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	157.972472092634	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	6	True	NA	10	True	AATAGA	-25	NA	34614974	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646599_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.32	chr4	+	3671	18	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	576	junction_1	54.2315297915282	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	6	True	NA	10	True	AATAGA	-25	NA	34614974	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.33	chr4	+	1960	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.468148612995	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	9	True	NA	8	True	AATAGA	-23	NA	34614977	34660163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34616608_34616726_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.34	chr4	+	4578	2	NNC	ENSMUSG00000028292.15	novel	683	3	NA	NA	0	800	intron_retention	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	9	True	NA	NA	False	NA	NA	NA	34614977	34619721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34617349_34617514
ES.23116.35	chr4	+	3013	19	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	576	junction_1	52.9662424522089	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	10	True	NA	8	True	AATAGA	-23	NA	34614978	34660163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.36	chr4	+	2375	20	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	3	0	intron_retention	FALSE	canonical	2	17	junction_1	153.847696028921	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	12	True	NA	8	True	AATAGA	-23	NA	34614980	34660163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615562_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.38	chr4	+	2323	10	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	9	-12141	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	270.650017732801	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGCTCCGGTCTTGCA	18	True	NA	NA	False	AATAAA	-9	NA	34614986	34644036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34642432
ES.23116.39	chr4	+	2031	20	NNC	ENSMUSG00000028292.15	novel	526	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.468090246829	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	64	False	NA	8	True	AATAGA	-23	NA	34615032	34660163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615270_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.4	chr4	+	1775	19	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	2	20	junction_10	157.652503083189	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-17	True	NA	10	True	AATAGA	-25	NA	34614951	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.40	chr4	+	4096	15	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	15534	1	intron_retention	FALSE	canonical	3	617	junction_9	24.4152010193717	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	NA	False	NA	9	True	AATAGA	-24	NA	34630511	34660164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.41	chr4	+	2104	1	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-10110	9135	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTATGAAATTGCCTG	NA	False	NA	NA	False	NA	NA	NA	34637601	34639705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_34637600_34639700
ES.23116.42	chr4	+	2914	9	ISM	ENSMUSG00000028292.15	ENSMUST00000142045.8	1843	20	33157	2	419	-2	3prime_fragment	FALSE	canonical	3	578	junction_2	41.2121038045863	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTGTAGTAGTG	NA	False	NA	6	True	AATAGA	-21	NA	34648130	34660161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.5	chr4	+	3580	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_1	275.753019022458	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGTAGTAGTGTGT	-17	True	NA	9	True	AATAGA	-24	NA	34614951	34660164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34616659_34618553_34618633_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659525_34659983
ES.23116.7	chr4	+	1965	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-8	True	NA	10	True	AATAGA	-25	NA	34614960	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.8	chr4	+	2070	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	5	-207	1	207	multi-exon	FALSE	canonical	3	576	junction_1	51.5992441268264	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAACACACAACC	-7	True	NA	NA	False	NA	NA	NA	34614961	34660374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23116.9	chr4	+	1858	20	NNC	ENSMUSG00000028292.15	novel	1843	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	273.790232500618	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTAGTAGTGTGTT	-7	True	NA	10	True	AATAGA	-25	NA	34614961	34660165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_34615027_34618553_34618633_34623410_34623514_34625400_34625485_34630476_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ES.23117.1	chr4	+	2636	1	Antisense	novelGene_ENSMUSG00000028293.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTGTATGTATTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	34668172	34670808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_34668200_34670800
ES.23118.10	chr4	-	1222	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	118	699	-65	-63	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAATTTGGGTGTGTT	7	True	NA	NA	False	AAGAAA	-23	NA	34687320	34663955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ES.23118.11	chr4	-	1413	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	0	-68	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	59.0750317393059	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGATTTAATTTGGGT	21	True	NA	NA	False	AAGAAA	-18	NA	34687396	34663960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34673808_34673929_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ES.23118.12	chr4	-	2705	1	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	-78	2505	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCTCCAGCCACCCCC	3920	False	NA	NA	False	NA	NA	NA	34683540	34680835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34680800_34683500
ES.23118.13	chr4	-	5884	2	ISM	ENSMUSG00000028293.15	ENSMUST00000154020.2	358	3	-9	-2405	-9	2405	intron_retention	FALSE	canonical	3	12	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAACAACA	12	True	NA	NA	False	NA	NA	NA	34687405	34680935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34683463_34684048
ES.23118.2	chr4	-	2049	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	-8	-2	-8	2	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCAGTTACTTTGTTT	14	False	34687460	-11	True	AATAAA	-16	NA	34687446	34663254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ES.23118.3	chr4	-	2113	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	55.3893886498127	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTGCAGTTACTTTG	-13	True	NA	-14	True	AATAAA	-13	NA	34687430	34663257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34684048_34684132_34687243
ES.23118.4	chr4	-	2064	8	NNC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	64.3957787943481	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTGCAGTTACTTTG	-21	True	NA	-14	True	AATAAA	-13	NA	34687438	34663257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675004_34675183_34675471_34675633_34683284_34683463_34687243
ES.23118.5	chr4	-	1782	8	NNC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.3399153549296	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTGCAGTTACTTTG	5	True	NA	-14	True	AATAAA	-13	NA	34687322	34663257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34664231_34668925_34669051_34669616_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ES.23118.7	chr4	-	1544	5	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	-69	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	61.9879020454798	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTGCAGTTACTTTG	3	True	NA	-14	True	AATAAA	-13	NA	34687324	34663257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34683284_34683463_34687243
ES.23118.8	chr4	-	2155	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	59.0750317393059	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGTGCAGTTACTTT	-19	True	NA	-15	True	AATAAA	-12	NA	34687436	34663258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34673808_34673929_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ES.23118.9	chr4	-	4351	1	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	15760	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGTGCAGTTACTTT	NA	False	NA	-15	True	AATAAA	-12	NA	34667609	34663258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34663300_34667600
ES.23119.1	chr4	-	5875	11	NIC	ENSMUSG00000028294.16	novel	2246	13	NA	NA	0	-23	intron_retention	FALSE	canonical	0	0	junction_1	2.64764045897475	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTGTCCGCGTATTT	-12	True	NA	NA	False	ATTAAA	-11	NA	34730206	34688581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34689015_34692386_34692531_34711401_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34721575_34722607_34724906_34727904_34727989_34728795_34728909_34730059
ES.23119.2	chr4	-	3298	10	NNC	ENSMUSG00000028294.16	novel	1688	11	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_9	2.70801280154532	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTTTACTGTGTATT	-11	True	NA	NA	False	ATTAAA	-11	NA	34730205	34711335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34721575_34722607_34722797_34724814_34724906_34727904_34727989_34728795_34728909_34730106
ES.23119.3	chr4	-	5042	1	NIC	ENSMUSG00000028294.16	novel	2246	13	NA	NA	4	-1601	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTGTTGGATACCCA	-8	True	NA	NA	False	NA	NA	NA	34730202	34725160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34725200_34730200
ES.23119.4	chr4	-	176	1	Intergenic	novelGene_18976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCCTTAGGCGT	1533	False	NA	NA	False	NA	NA	NA	34728661	34728485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34728500_34728700
ES.2312.1	chr10	-	7267	20	FSM	ENSMUSG00000015305.7	ENSMUST00000015449.6	7183	20	-4	-80	-4	80	multi-exon	FALSE	canonical	1	3	junction_11	2.30139064306057	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATTTGTACAGGGTTC	779	False	NA	71	True	ATTAAA	-27	NA	8761818	8597902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_8601525_8603621_8603754_8605091_8606201_8609359_8609474_8615084_8615236_8615937_8616148_8617191_8617362_8618191_8618328_8620251_8620396_8621879_8621955_8626902_8627250_8632392_8632526_8656282_8656385_8659961_8660075_8662111_8662199_8665324_8665366_8690004_8690055_8690170_8690222_8726106_8726236_8761467
ES.2312.2	chr10	-	2672	1	NIC	ENSMUSG00000015305.7	novel	7183	20	NA	NA	-2539	-5470	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-14	NA	8635064	8632392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_8632400_8635100
ES.2312.3	chr10	-	6099	1	Intergenic	novelGene_1762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACTTTTGCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	8676903	8670804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8670800_8676900
ES.2312.4	chr10	-	1953	1	Intergenic	novelGene_1763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCCATACCCACATTTC	NA	False	NA	NA	False	NA	NA	NA	8708424	8706471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_8706500_8708400
ES.23120.1	chr4	-	2149	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	76	-1439	2	1439	multi-exon	FALSE	canonical	3	160	junction_2	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCAGAAAGACAAACATGA	4	True	NA	NA	False	AATAAA	-24	NA	34778347	34767224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34778278
ES.23120.10	chr4	-	2019	4	NNC	ENSMUSG00000028295.15	novel	935	4	NA	NA	-4188	-115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.5259578327656	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGCATGGAGTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	34782611	34768789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34769148_34771257_34771415_34771873_34772054_34781287
ES.23120.11	chr4	-	225	1	Intergenic	novelGene_18977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGACTGTAAAACCATT	NA	False	NA	NA	False	AAAAAG	-21	NA	34780951	34780726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34780700_34781000
ES.23120.2	chr4	-	2185	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	26	-1429	-1	1429	multi-exon	FALSE	canonical	3	19	junction_2	76	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTCAGCCCCAGAAAG	13	True	NA	NA	False	AATAAA	-14	NA	34778338	34767234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34778223
ES.23120.4	chr4	-	6520	3	NNC	ENSMUSG00000028295.15	novel	782	3	NA	NA	28	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	85.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	161	False	NA	NA	False	ATTAAA	-3	NA	34778190	34768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34769148_34771257_34775053_34775934
ES.23120.5	chr4	-	745	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	26	15	26	-4	multi-exon	FALSE	canonical	3	160	junction_2	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	NA	False	NA	NA	False	ATTAAA	-3	NA	34778397	34768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34778278
ES.23120.6	chr4	-	774	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	-7	15	-7	-4	multi-exon	FALSE	canonical	3	19	junction_2	76	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	-20	True	NA	NA	False	ATTAAA	-3	NA	34778371	34768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34778223
ES.23120.7	chr4	-	872	4	FSM	ENSMUSG00000028295.15	ENSMUST00000108131.8	892	4	5	15	5	-4	multi-exon	FALSE	canonical	1	2	junction_3	75.9780670105963	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	7	True	NA	NA	False	ATTAAA	-3	NA	34778344	34768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34771873_34772054_34778278
ES.23120.8	chr4	-	738	3	NNC	ENSMUSG00000028295.15	novel	786	3	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATAAAACAAAGTGGT	NA	False	NA	NA	False	ATTAAA	-3	NA	34778396	34768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34769148_34771263_34771415_34778278
ES.23120.9	chr4	-	623	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	35	124	2	-113	multi-exon	FALSE	canonical	3	19	junction_2	76	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCATGGAGTTTCTAA	22	True	NA	NA	False	AATAAA	-18	NA	34778329	34768787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34769148_34771257_34771415_34778223
ES.23121.1	chr4	+	178	1	Intergenic	novelGene_18978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTATTTAACTAATA	NA	False	NA	NA	False	NA	NA	NA	34790165	34790343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34790200_34790300
ES.23122.1	chr4	+	3920	1	Intergenic	novelGene_18980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGATGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	34830988	34834908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34831000_34834900
ES.23123.1	chr4	+	2456	1	Intergenic	novelGene_18982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACCAGTTTTATCTGAT	NA	False	NA	NA	False	NA	NA	NA	34859544	34862000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34859500_34862000
ES.23124.1	chr4	+	176	1	Intergenic	novelGene_18984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34876195	34876371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34876200_34876400
ES.23125.1	chr4	+	139	1	Intergenic	novelGene_18985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCAAC	NA	False	NA	NA	False	NA	NA	NA	34881437	34881576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34881400_34881600
ES.23125.2	chr4	+	237	1	Intergenic	novelGene_18986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATAGCAAATTTCAAA	NA	False	NA	NA	False	ACTAAA	-42	NA	34881440	34881677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34881400_34881700
ES.23126.1	chr4	-	1689	5	NNC	ENSMUSG00000039967.15	novel	9941	8	NA	NA	-13	13610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.6497557567365	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGGCTTTCGTAGAT	-2	True	NA	NA	False	AATAAA	-15	NA	34882943	34789502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34790636_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.10	chr4	-	9791	8	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	2	-151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.5624525153497	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGATTGTGTTGAGTAG	13	True	NA	70	True	ATTAAA	-26	NA	34882928	34803263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816404_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.11	chr4	-	9958	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	1	-219	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGTAATTTCTTTTGGA	12	True	NA	2	True	AATAAA	-18	NA	34882929	34803331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.12	chr4	-	9750	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	17	219	-13	-219	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGTAATTTCTTTTGGA	-2	True	NA	2	True	AATAAA	-18	NA	34882943	34803331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.13	chr4	-	9638	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-5	-222	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	50.3736041990247	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACCGTAATTTCTTTT	6	True	NA	-1	True	AATAAA	-15	NA	34882935	34803334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34809581_34809681_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.14	chr4	-	6634	1	ISM	ENSMUSG00000039967.15	ENSMUST00000098163.9	9941	8	72379	805	72379	-805	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGAGCCCATCTTGTGT	NA	False	NA	NA	False	TATAAA	-20	NA	34810551	34803917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_34803900_34810600
ES.23126.15	chr4	-	9039	8	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-13	-931	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.5624525153497	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATAAGATTTTTTTTC	-2	True	NA	3	True	AATAAA	-30	NA	34882943	34804043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816417_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.16	chr4	-	7178	2	NNC	ENSMUSG00000039967.15	novel	9941	8	NA	NA	71330	-935	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCTTATAAGATTTTT	NA	False	NA	-1	True	AATAAA	-26	NA	34811600	34804047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34810207_34810581
ES.23126.18	chr4	-	8227	3	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-4	-944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATGTGATCTTAT	7	True	NA	-10	True	AATAAA	-17	NA	34882934	34804056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812055_34847980_34848033_34882757
ES.23126.19	chr4	-	9236	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-4	-946	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGTATGTGATCTT	7	True	NA	-12	True	AATAAA	-15	NA	34882934	34804058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.2	chr4	-	10225	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTGTTCATGGGGC	NA	False	NA	10	True	AATAAA	-42	NA	34882972	34803107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.20	chr4	-	8894	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	23	1069	-7	-1069	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGTATTTTAAGATATC	4	True	NA	NA	False	AATAAA	-27	NA	34882937	34804181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.21	chr4	-	9119	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-13	-1072	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGGTATTTTAAGAT	-2	True	NA	NA	False	AATAAA	-24	NA	34882943	34804184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.23	chr4	-	8407	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-14	-1785	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTGAGCTTTTTAA	-3	True	NA	NA	False	AATACA	-42	NA	34882944	34804897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.24	chr4	-	8181	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	20	1785	-10	-1785	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTGAGCTTTTTAA	1	True	NA	NA	False	AATACA	-42	NA	34882940	34804897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.25	chr4	-	6319	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-7	-3866	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCTGAGAAACCAGAAAGT	4	True	NA	-84	True	AAAACA	-18	NA	34882937	34806978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
ES.23126.26	chr4	-	4171	1	Intergenic	novelGene_18979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAAGCGGGGAGC	3381	False	NA	NA	False	NA	NA	NA	34831482	34827311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34827300_34831500
ES.23126.27	chr4	-	3579	1	Intergenic	novelGene_18981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCGTACTCTGAGCTT	NA	False	NA	NA	False	NA	NA	NA	34839034	34835455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34835500_34839000
ES.23126.28	chr4	-	9864	1	Intergenic	novelGene_18983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCAGATGGCATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34872051	34862187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34862200_34872100
ES.23126.29	chr4	-	2105	1	NIC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-5	-77718	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAACTCGATAT	6	True	NA	NA	False	AATAAA	-6	NA	34882935	34880830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34880800_34882900
ES.23126.3	chr4	-	10001	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	-12	-3	-12	3	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTTTTGTTCATGGG	NA	False	NA	8	True	AATAAA	-40	NA	34882972	34803109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.4	chr4	-	3334	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5679163821848	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGAATAATGTTTTGTT	19	True	NA	2	True	AATAAA	-34	NA	34882922	34803115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34803414_34810024_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ES.23126.5	chr4	-	12423	3	NIC	ENSMUSG00000039967.15	novel	9941	8	NA	NA	56059	-14	intron_retention	FALSE	canonical	3	128	junction_1	1.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTCAACAACTGAAT	7992	False	NA	-9	True	AATAAA	-23	NA	34826871	34803126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_34812044_34816273_34819601_34826692
ES.23126.6	chr4	-	3801	3	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-13	-14	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTCAACAACTGAAT	-2	True	NA	-9	True	AATAAA	-23	NA	34882943	34803126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34806682_34839926_34839987_34882757
ES.23126.7	chr4	-	9983	8	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-9	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.0051980508343	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTCAACAACTGAAT	2	True	NA	-9	True	AATAAA	-23	NA	34882939	34803126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839500_34839568_34839648_34839831_34839987_34882757
ES.23126.8	chr4	-	10525	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-9	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.9383120738444	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTTTTTCAACAACT	2	True	NA	-13	True	AATAAA	-19	NA	34882939	34803130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34851828_34852407_34882757
ES.23126.9	chr4	-	10515	8	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	-4	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.816204962863	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTATATTTTTTCAAC	7	True	NA	-17	True	AATAAA	-15	NA	34882934	34803134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34838754_34839468_34839568_34839648_34839831_34839987_34882757
ES.23127.1	chr4	-	172	1	Intergenic	novelGene_18987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACTTTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	34922116	34921944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34921900_34922100
ES.23128.1	chr4	+	197	1	Intergenic	novelGene_18988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGTTCATATCAGTAA	NA	False	NA	NA	False	NA	NA	NA	34925962	34926159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34926000_34926200
ES.23128.2	chr4	+	310	1	Intergenic	novelGene_18989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTACAGAGGTAAGGATA	NA	False	NA	NA	False	NA	NA	NA	34925963	34926273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34926000_34926300
ES.23129.1	chr4	-	242	1	Intergenic	novelGene_18990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCATTTACTCAGCT	NA	False	NA	NA	False	NA	NA	NA	34935995	34935753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34935800_34936000
ES.2313.1	chr10	+	1210	1	Genic_Genomic	ENSMUSG00000097597.3	novel	NA	NA	NA	NA	2203	1171	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTTGAATTGGTTT	NA	False	NA	NA	False	NA	NA	NA	8762583	8763793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_8762600_8763800
ES.23130.1	chr4	+	1844	1	Intergenic	novelGene_18993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAGAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	34995321	34997165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_34995300_34997200
ES.23131.1	chr4	+	228	1	Intergenic	novelGene_18994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGACAGGCCTTTCACT	NA	False	NA	NA	False	AAAAAG	-30	NA	35010806	35011034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35010800_35011000
ES.23132.1	chr4	+	5193	1	Intergenic	novelGene_18995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGAGACCAGAGAGATA	NA	False	NA	NA	False	NA	NA	NA	35030456	35035649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35030500_35035600
ES.23133.1	chr4	+	158	1	Intergenic	novelGene_18997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTCTG	NA	False	NA	NA	False	NA	NA	NA	35149777	35149935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35149800_35149900
ES.23133.2	chr4	+	301	1	Intergenic	novelGene_18998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAACAAAATATAG	NA	False	NA	NA	False	NA	NA	NA	35149780	35150081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35149800_35150100
ES.23134.1	chr4	-	6042	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	-7	-5	-7	5	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTGTCGTCTTTGCCTG	-39	True	NA	NA	False	AATAAA	-21	NA	35157491	34949068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ES.23134.2	chr4	-	2543	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	9	3478	9	-3478	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGATGCTGTCTTCTGTT	-23	True	NA	NA	False	NA	NA	NA	35157475	34952551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ES.23134.4	chr4	-	2367	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	30	3633	30	-3633	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGAATGTATTCTTAC	-2	True	NA	NA	False	AATAAA	-23	NA	35157454	34952706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ES.23134.5	chr4	-	1654	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	134	4242	134	-4242	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCCTAGTCAGAATGTA	904	False	NA	NA	False	AATAAA	-17	NA	35157350	34953315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ES.23134.6	chr4	-	175	1	Intergenic	novelGene_18991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	34955713	34955538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34955500_34955700
ES.23134.7	chr4	-	211	1	Intergenic	novelGene_18992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCACACTGGGTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	34984246	34984035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_34984000_34984200
ES.23134.8	chr4	-	4170	1	Intergenic	novelGene_18996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATTGTGACCATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	35082239	35078069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_35078100_35082200
ES.23135.1	chr4	+	209	1	Intergenic	novelGene_18999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATGCATATTATTA	NA	False	NA	NA	False	NA	NA	NA	35166508	35166717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35166500_35166700
ES.23136.1	chr4	-	360	1	Intergenic	novelGene_19000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACACACACACAA	NA	False	NA	NA	False	NA	NA	NA	35176287	35175927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_35175900_35176300
ES.23137.1	chr4	+	6302	1	Antisense	novelGene_ENSMUSG00000082762.2_AS_novelGene_ENSMUSG00000028300.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAGGGATGAGTAAC	NA	False	NA	NA	False	NA	NA	NA	35200579	35206881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_35200600_35206900
ES.23138.1	chr4	-	3165	11	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.4991227935177	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTAGTTCATTATTTA	-25	True	NA	0	True	AATAAA	-21	NA	35225848	35191281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213639_35217207_35217273_35218413_35218917_35225787
ES.23138.11	chr4	-	3310	11	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	28.2637577119533	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATGTTTTAGTTCA	NA	False	NA	-7	True	AATAAA	-14	NA	35226140	35191288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225928
ES.23138.12	chr4	-	3932	8	ISM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	27	2970	-19	2787	5prime_fragment	FALSE	canonical	3	67	junction_5	10.3706808073609	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAAGTTGTGGAATGTA	-30	True	NA	NA	False	TATAAA	-21	NA	35225853	35194256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.13	chr4	-	1265	8	ISM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	38	5626	-8	131	5prime_fragment	FALSE	canonical	3	67	junction_5	10.3706808073609	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAGTGCAAGTTGTA	-19	True	NA	NA	False	CATAAA	-17	NA	35225842	35196912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.14	chr4	-	1940	8	Fusion	ENSMUSG00000028300.15_ENSMUSG00000082762.2	novel	1370	5	NA	NA	19	68	multi-exon	FALSE	non_canonical	0	0	junction_1	32.1596781383021	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGGACTCGGTA	NA	False	NA	NA	False	AATAAA	-44	NA	35225861	35202034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_35202987_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.15	chr4	-	4717	7	ISM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	23	10748	-23	-4991	5prime_fragment	FALSE	canonical	3	67	junction_4	11.1952370824978	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGGACTCGGTA	-34	False	NA	NA	False	AATAAA	-44	NA	35225857	35202034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.16	chr4	-	2336	3	ISM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	65	24181	19	2941	5prime_fragment	FALSE	canonical	3	85	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGCTGTACCTGTCTG	8	True	NA	NA	False	AATAAA	-19	NA	35225815	35215467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_35217273_35218413_35218917_35225787
ES.23138.2	chr4	-	3088	11	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.722116913626	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTAGTTCATTAT	13	True	NA	-3	True	AATAAA	-18	NA	35225810	35191284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205848_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.3	chr4	-	3207	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	-12	-2	-12	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTTTAGTTCATTAT	NA	False	NA	-3	True	AATAAA	-18	NA	35225892	35191284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.4	chr4	-	6107	11	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	22	0	intron_retention	FALSE	canonical	1	1	junction_1	41.3846589934	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	11	True	NA	-5	True	AATAAA	-16	NA	35225812	35191286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_35193065_35193184_35193295_35194136_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35221880_35222089_35225787
ES.23138.6	chr4	-	3480	14	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	43.734405504729	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	-13	True	NA	-5	True	AATAAA	-16	NA	35225836	35191286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35209805_35209835_35210085_35210180_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35221880_35222089_35225787
ES.23138.8	chr4	-	3054	10	NIC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	28.8512575415422	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	17	True	NA	-5	True	AATAAA	-16	NA	35225806	35191286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ES.23138.9	chr4	-	2961	12	NNC	ENSMUSG00000028300.15	novel	3193	11	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	27.2466542035762	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	35225858	35191286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218587_35218796_35218917_35225787
ES.23139.1	chr4	+	171	1	Intergenic	novelGene_19001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	35523291	35523462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35523300_35523500
ES.2314.1	chr10	+	5342	1	Intergenic	novelGene_1765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAACGATGTAATTGGCA	NA	False	NA	NA	False	TTTAAA	-17	NA	8792077	8797419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_8792100_8797400
ES.23140.1	chr4	+	419	1	Intergenic	novelGene_19002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	35990738	35991157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_35990700_35991200
ES.23141.1	chr4	-	164	1	Intergenic	novelGene_19003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7611	False	NA	NA	False	NA	NA	NA	35998394	35998230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_35998200_35998400
ES.23142.1	chr4	-	177	1	Intergenic	novelGene_19004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATAATTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	36587177	36587000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_36587000_36587200
ES.23143.1	chr4	-	158	1	Intergenic	novelGene_19005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATACATAAATA	NA	False	NA	NA	False	NA	NA	NA	36805981	36805823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_36805800_36806000
ES.23144.1	chr4	-	190	1	Intergenic	novelGene_19006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATATCTTTAAGT	NA	False	NA	NA	False	CATAAA	-6	NA	37501135	37500945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_37500900_37501100
ES.23145.1	chr4	-	257	1	Intergenic	novelGene_19007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTCATTGCATCTGT	NA	False	NA	NA	False	NA	NA	NA	37534425	37534168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_37534200_37534400
ES.23146.1	chr4	-	2733	1	Intergenic	novelGene_19008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAACTAAAT	NA	False	NA	NA	False	NA	NA	NA	37757892	37755159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_37755200_37757900
ES.23147.1	chr4	+	175	1	Intergenic	novelGene_19009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAATAGGAAACT	NA	False	NA	NA	False	NA	NA	NA	37783716	37783891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_37783700_37783900
ES.23148.1	chr4	+	283	1	Intergenic	novelGene_19010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTATTAATTTCAGAAT	NA	False	NA	NA	False	AAGAAA	-21	NA	37804655	37804938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_37804700_37804900
ES.23148.2	chr4	+	156	1	Intergenic	novelGene_19011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37804656	37804812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_37804700_37804800
ES.23149.1	chr4	+	208	1	Intergenic	novelGene_19012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAGGGCTGAATTGTCA	NA	False	NA	NA	False	NA	NA	NA	38983272	38983480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_38983300_38983500
ES.2315.1	chr10	+	2698	1	Antisense	novelGene_ENSMUSG00000019790.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTTTACCCAAGAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	9655891	9658589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_9655900_9658600
ES.23150.1	chr4	-	1286	9	Intergenic	novelGene_19013	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1.31695671910659	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGTAATATAAAATTGTA	NA	False	NA	NA	False	TTTAAA	-8	NA	39718740	39708423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_39708830_39708917_39709148_39709356_39709412_39710078_39710210_39710975_39711034_39715244_39715333_39716235_39716295_39718403_39718585_39718662
ES.23150.2	chr4	-	376	3	Intergenic	novelGene_19014	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCATGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	39718754	39716155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_39716295_39718403_39718585_39718698
ES.23151.1	chr4	-	3625	2	Intergenic	novelGene_19015	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTGCTTCTCTCT	5915	False	NA	NA	False	NA	NA	NA	40057886	39953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_39954258_40055507
ES.23152.1	chr4	+	173	1	Intergenic	novelGene_19016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	40131547	40131720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40131500_40131700
ES.23153.1	chr4	+	3919	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	-85	-2	-85	2	multi-exon	TRUE	canonical	3	234	junction_5	35.2306684580353	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTTTGGAGTTGAGT	NA	False	NA	11	True	ATTAAA	-19	NA	40142995	40198340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.12	chr4	+	3471	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	349	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.4543131911414	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGTGTTGGCTTTGG	23	True	NA	3	True	ATTAAA	-11	NA	40143429	40198332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176020_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.13	chr4	+	5025	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	350	3378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	72.7391512665918	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	24	True	NA	NA	False	AATAAA	-18	NA	40143430	40201716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553_40197664_40199498
ES.23153.14	chr4	+	3370	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	354	4423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	72.7391512665918	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAGTCGTAGTTATA	28	True	NA	NA	False	ATTAAA	-12	NA	40143434	40202761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553_40197630_40202160
ES.23153.15	chr4	+	5964	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	354	4431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	73.4492341689142	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTAGTTATATTTTATGG	28	True	NA	NA	False	ATTAAA	-20	NA	40143434	40202769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40199498
ES.23153.18	chr4	+	3439	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	388	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	74.1814498375436	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCTTTGGAGTTGAG	-13	True	NA	10	True	ATTAAA	-18	NA	40143468	40198339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178978_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.19	chr4	+	4598	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	400	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	73.6733330317015	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGGCTTTGGAG	-1	True	NA	5	True	ATTAAA	-13	NA	40143480	40198334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40186228_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.2	chr4	+	3887	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	-34	11824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	72.7391512665918	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGTTTCACCATTCTC	NA	False	NA	NA	False	NA	NA	NA	40143046	40210162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553_40198328_40210130
ES.23153.20	chr4	+	3608	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	401	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.4916941964152	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	0	True	NA	9	True	ATTAAA	-17	NA	40143481	40198338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40143669_40143847_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.21	chr4	+	3519	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	402	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	94.4911902455123	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGTGTTGGCTTTGG	1	True	NA	3	True	ATTAAA	-11	NA	40143482	40198332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40157603_40157699_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.23	chr4	+	3481	22	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	402	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	93.9804099816417	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGTGTTGGCTTTGG	1	True	NA	3	True	ATTAAA	-11	NA	40143482	40198332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186170_40186228_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.24	chr4	+	3309	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	445	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.048341429673	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGGCTTTGGAG	10	False	NA	5	True	ATTAAA	-13	NA	40143525	40198334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40145163_40145219_40163726_40163846_40164608_40164778_40175647_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.25	chr4	+	3667	21	NNC	ENSMUSG00000028405.10	novel	714	5	NA	NA	464	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.0458641653941	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGTGTTGGCTTTGG	29	False	NA	3	True	ATTAAA	-11	NA	40143544	40198332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143847_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.26	chr4	+	3368	20	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	20637	4	-1	-4	3prime_fragment	FALSE	canonical	3	234	junction_4	36.1390052551398	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGGCTTTGGAG	3419	False	NA	5	True	ATTAAA	-13	NA	40163717	40198334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.27	chr4	+	2320	3	FSM	ENSMUSG00000028405.10	ENSMUST00000135787.2	638	3	248	-1930	248	-4	multi-exon	FALSE	canonical	3	270	junction_2	48.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGGCTTTGGAG	5808	False	NA	5	True	ATTAAA	-13	NA	40190777	40198334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40190885_40193738_40193862_40196244
ES.23153.3	chr4	+	4248	24	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.484172170043	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	NA	False	NA	9	True	ATTAAA	-17	NA	40143064	40198338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40143669_40143847_40145163_40145257_40146330_40146461_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23153.4	chr4	+	9394	20	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	-12	-4427	-12	4427	intron_retention	FALSE	canonical	3	234	junction_5	34.8338358766825	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCGTAGTTATATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	40143068	40202765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244
ES.23153.6	chr4	+	4964	21	NNC	ENSMUSG00000028405.10	novel	3832	21	NA	NA	301	3378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	73.4492341689142	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	-25	True	NA	NA	False	AATAAA	-18	NA	40143381	40201716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40199498
ES.23153.7	chr4	+	3045	20	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	301	1609	301	325	5prime_fragment	FALSE	canonical	3	234	junction_5	34.8338358766825	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTATGTACGCCCTCCA	-25	True	NA	NA	False	AATGAA	-16	NA	40143381	40196729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244
ES.23153.8	chr4	+	5782	4	ISM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	304	25956	304	3022	5prime_fragment	FALSE	canonical	3	304	junction_1	2.62466929133727	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAAAGAAAGAGCTTA	-22	True	NA	NA	False	NA	NA	NA	40143384	40172382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053
ES.23153.9	chr4	+	4185	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	318	-671	318	671	multi-exon	FALSE	canonical	3	234	junction_5	35.2306684580353	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTGTGTCTCTCTCTTT	-8	True	NA	NA	False	NA	NA	NA	40143398	40199009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ES.23154.1	chr4	+	203	1	Intergenic	novelGene_19017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAGAAGATTCCAAGG	NA	False	NA	NA	False	NA	NA	NA	40214110	40214313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40214100_40214300
ES.23155.1	chr4	+	181	1	Intergenic	novelGene_19018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	40217791	40217972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40217800_40218000
ES.23156.1	chr4	-	3569	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	-31	-5	-31	1	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGGTGTTTTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	40220631	40203771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ES.23156.2	chr4	-	3029	10	NNC	ENSMUSG00000040296.16	novel	3533	9	NA	NA	-442	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.9594382002072	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGGGTGTTTTTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	40221042	40203771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40203946_40204896_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ES.23156.3	chr4	-	3869	18	FSM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	5	0	2	0	multi-exon	FALSE	canonical	0	0	junction_16	34.3834473735139	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	-18	True	NA	-10	True	AATAAA	-22	NA	40239823	40204848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494_40229677_40235247_40235383_40239590
ES.23156.5	chr4	-	2432	9	NNC	ENSMUSG00000040296.16	novel	3533	9	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.2277604206414	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTACTTCCAATTCATT	8	True	NA	-14	True	AATAAA	-18	NA	40220583	40204852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216362_40216491_40217329_40217488_40220398
ES.23156.6	chr4	-	196	1	Intergenic	novelGene_19019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATGGAAAAAAAA	7447	False	NA	NA	False	NA	NA	NA	40232358	40232162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_40232200_40232400
ES.23157.1	chr4	-	221	1	Intergenic	novelGene_19020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAGTCTGGAACAGTT	7985	False	NA	NA	False	NA	NA	NA	40253700	40253479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_40253500_40253700
ES.23158.1	chr4	+	335	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	-10	719	-10	-5	multi-exon	FALSE	canonical	3	97	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCGTGTGGCCTTTT	-11	True	NA	2	True	AGTAAA	-12	NA	40269568	40270221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40269720_40270037
ES.23159.1	chr4	+	275	1	Intergenic	novelGene_19021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCACCCACAGTGCTTGGC	4397	False	NA	NA	False	NA	NA	NA	40274332	40274607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40274300_40274600
ES.2316.1	chr10	+	3975	1	Antisense	novelGene_ENSMUSG00000019790.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGGTGGGTGGGGAA	NA	False	NA	NA	False	NA	NA	NA	9708924	9712899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_9708900_9712900
ES.23160.1	chr4	-	5240	6	Fusion	ENSMUSG00000071014.11_ENSMUSG00000036822.7	novel	659	4	NA	NA	3	0	intron_retention	FALSE	canonical	3	214	junction_1	1130.31570810991	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	5	True	NA	0	True	AATAAA	-28	NA	40279406	40259600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_40263082_40268303_40268502_40269673_40270848_40272809_40272855_40277652_40277746_40279157
ES.23160.10	chr4	-	911	1	NIC	ENSMUSG00000071014.11	novel	659	4	NA	NA	7836	2	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCCGTGTTACTGT	7838	False	NA	-9	True	AATAAA	-19	NA	40271573	40270662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40270700_40271600
ES.23160.11	chr4	-	5117	4	NNC	ENSMUSG00000071014.11	novel	659	4	NA	NA	51	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1189.71882766009	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCCGTGTTACTGT	2	True	NA	-9	True	AATAAA	-19	NA	40279358	40270662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40270848_40272809_40274330_40274534_40277746_40279157
ES.23160.12	chr4	-	6537	3	NNC	ENSMUSG00000071014.11	novel	480	3	NA	NA	43	2	intron_retention	FALSE	non_canonical	0	0	junction_2	1272.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCCGTGTTACTGT	-6	True	NA	-9	True	AATAAA	-19	NA	40279366	40270662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40270848_40272809_40274330_40274534
ES.23160.2	chr4	-	3827	3	NNC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	106	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	-17	True	NA	0	True	AATAAA	-28	NA	40269830	40259600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40263082_40268303_40268493_40269673
ES.23160.3	chr4	-	5018	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	8	2	8	-2	intron_retention	FALSE	canonical	3	214	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGCAACATTGA	-29	True	NA	-2	True	AATAAA	-26	NA	40269842	40259602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40263082_40268303
ES.23160.4	chr4	-	3641	2	NIC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGTGCAACATTGA	-22	True	NA	-2	True	AATAAA	-26	NA	40269835	40259602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40263082_40269673
ES.23160.5	chr4	-	2537	4	NNC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.927403687677	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTCTGTGCAACATT	-13	True	NA	-4	True	AATAAA	-24	NA	40269826	40259604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40260818_40262108_40263082_40268303_40268502_40269673
ES.23160.6	chr4	-	3923	1	NIC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	6312	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCAGACAATTTTC	6275	False	NA	-15	True	AATAAA	-13	NA	40263538	40259615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40259600_40263500
ES.23160.7	chr4	-	3517	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	32	307	32	-307	multi-exon	FALSE	canonical	3	214	junction_1	19	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCATATGGTATTGACA	-5	True	NA	NA	False	AATAAA	-29	NA	40269818	40259907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40263082_40268303_40268502_40269673
ES.23160.9	chr4	-	614	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	-18	63	-18	11	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTACTGTCCAAAGGTT	NA	False	NA	0	True	AATAAA	-28	NA	40279439	40270653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ES.23161.1	chr4	+	1288	1	Intergenic	novelGene_19022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	40283751	40285039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40283800_40285000
ES.23162.1	chr4	-	2988	1	Intergenic	novelGene_19023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	40597859	40594871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_40594900_40597900
ES.23163.1	chr4	+	229	1	Intergenic	novelGene_19024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTAAGCGACCTCCA	NA	False	NA	NA	False	NA	NA	NA	40691905	40692134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40691900_40692100
ES.23164.1	chr4	-	2661	9	NNC	ENSMUSG00000028411.16	novel	1378	8	NA	NA	10	416	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.6422655826776	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATTATTTTGCCCGTTT	-7	True	NA	-1	True	AATAAA	-21	NA	40703177	40684507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40685504_40685944_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ES.23164.10	chr4	-	1850	8	NIC	ENSMUSG00000028411.16	novel	1378	8	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.7891936341086	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCCTGGATTGTGTAGT	17	True	NA	-10	True	AATATA	-15	NA	40702898	40686243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40702373
ES.23164.12	chr4	-	1447	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	-285	4088	-285	-228	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCTTATTTATTCT	NA	False	NA	NA	False	ACTAAA	-16	NA	40703479	40686469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ES.23164.2	chr4	-	2149	9	NNC	ENSMUSG00000028411.16	novel	1378	8	NA	NA	4	-319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.5313523918009	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGAGTGTGTGTATCAG	5	True	NA	NA	False	ATTAAA	-22	NA	40702910	40685242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40685504_40685944_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40702646
ES.23164.3	chr4	-	1918	9	NNC	ENSMUSG00000028411.16	novel	1378	8	NA	NA	11	-326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6422655826776	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTACTAGGAGTGTGT	-6	True	NA	NA	False	ATTAAA	-15	NA	40703176	40685249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40685504_40685944_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ES.23164.4	chr4	-	2260	8	NNC	ENSMUSG00000028411.16	novel	5250	8	NA	NA	0	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.5811596327609	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGATGTTGCAAAAT	8	True	NA	NA	False	GATAAA	-21	NA	40703162	40685335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40686714_40688108_40688213_40690968_40691196_40693393_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ES.23164.5	chr4	-	1390	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	4	3856	-3	4	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTGTGTAGTATCTGT	5	True	NA	-4	True	AATATA	-21	NA	40703190	40686237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ES.23164.6	chr4	-	2744	6	ISM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	6215	0	-2465	0	3prime_fragment	FALSE	canonical	3	146	junction_3	7.98498591107085	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	6236	False	NA	-8	True	AATATA	-17	NA	40696972	40686241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376
ES.23164.7	chr4	-	3058	7	NNC	ENSMUSG00000028411.16	novel	1378	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	59.8989890473027	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	9	True	NA	-8	True	AATATA	-17	NA	40703161	40686241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40686714_40688108_40688213_40690968_40691104_40693389_40693450_40694851_40695137_40695376_40697354_40703136
ES.23165.1	chr4	+	130	1	Intergenic	novelGene_19025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATCAGAA	3611	False	NA	NA	False	NA	NA	NA	40706905	40707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40706900_40707000
ES.23166.1	chr4	+	1634	9	NIC	ENSMUSG00000028410.14	novel	1130	5	NA	NA	18	-792	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	963.412286809235	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCCCTGTATGTATGA	1024	False	NA	14	True	AATAAA	-20	NA	40722167	40733108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722436_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.11	chr4	+	1418	9	NNC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	19	-794	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	962.799231083511	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	12	True	NA	12	True	AATAAA	-18	NA	40722498	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40722553_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.12	chr4	+	2325	7	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	20	1858	20	-794	intron_retention	FALSE	canonical	3	1814	junction_2	367.123238466625	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	13	True	NA	12	True	AATAAA	-18	NA	40722499	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683
ES.23166.13	chr4	+	5224	7	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	29	-794	intron_retention	FALSE	canonical	3	1814	junction_2	407.044087156279	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	22	True	NA	12	True	AATAAA	-18	NA	40722508	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.14	chr4	+	3548	7	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-27	-794	intron_retention	FALSE	canonical	3	2693	junction_3	124.715342547205	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-5	True	NA	12	True	AATAAA	-18	NA	40722531	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.15	chr4	+	5387	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	52	-2063	-27	-122	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCATATTAGTCTG	-5	True	NA	NA	False	AAGAAA	-44	NA	40722531	40737027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.17	chr4	+	2532	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-2	intron_retention	FALSE	canonical	3	1814	junction_2	374.178992418531	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTGTCACTGCAG	-3	True	NA	3	True	AATATA	-15	NA	40722533	40733898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40732177_40732727
ES.23166.18	chr4	+	1322	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-794	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1005.79165692645	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-3	True	NA	12	True	AATAAA	-18	NA	40722533	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.19	chr4	+	1592	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-794	intron_retention	FALSE	canonical	3	2624	junction_2	142.878998328184	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-3	True	NA	12	True	AATAAA	-18	NA	40722533	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.2	chr4	+	1777	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-24	1623	-24	-559	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGTCTAGTTATATGAA	1312	False	NA	-97	True	AAGAAA	-18	NA	40722455	40733341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.20	chr4	+	5989	7	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	1814	junction_2	407.044087156279	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCAGTGTGTCACTGC	-3	True	NA	1	True	AATATA	-13	NA	40722533	40733896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.21	chr4	+	2081	8	NNC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1270.32637618874	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTGTGTCACTGCAGG	-3	True	NA	4	True	AATATA	-16	NA	40722533	40733899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40722634_40723702_40723845_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732725
ES.23166.22	chr4	+	5288	6	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-25	-798	intron_retention	FALSE	canonical	3	2693	junction_2	134.268983760212	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTTGCCCTGTAT	-3	True	NA	8	True	AATAAA	-14	NA	40722533	40733102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.23	chr4	+	3765	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	54	-443	-25	443	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGCCTCCCCTGAAC	-3	True	NA	NA	False	GATAAA	-29	NA	40722533	40735407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.25	chr4	+	2990	7	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-24	802	intron_retention	FALSE	canonical	3	43	junction_2	1054.81794111064	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGTTAAATGAAGAA	-2	True	NA	-29	True	NA	NA	NA	40722534	40733065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40726104_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.26	chr4	+	2153	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-24	-3	combination_of_known_splicesites	FALSE	canonical	2	47	junction_7	957.417934885709	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAGTGTGTCACTGCA	-2	True	NA	2	True	AATATA	-14	NA	40722534	40733897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732727
ES.23166.27	chr4	+	1429	9	NNC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-24	802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	939.894400650945	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGTTAAATGAAGAA	-2	True	NA	-29	True	NA	NA	NA	40722534	40733065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732184_40732727
ES.23166.28	chr4	+	6084	6	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	2693	junction_2	134.268983760212	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTGTGTCACTGCAGG	-2	True	NA	4	True	AATATA	-16	NA	40722534	40733899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.29	chr4	+	1705	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	10	-794	intron_retention	FALSE	canonical	3	1814	junction_2	374.178992418531	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	32	False	NA	12	True	AATAAA	-18	NA	40722568	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40732177_40732727
ES.23166.3	chr4	+	2346	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-23	1053	-23	11	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCAGGCCTTTTTTTCTC	1313	False	NA	16	True	AATATA	-28	NA	40722456	40733911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.30	chr4	+	1639	9	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	169	-793	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	944.437919809979	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCCCTGTATGTATG	127	False	NA	13	True	AATAAA	-19	NA	40722727	40733107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40723002_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.32	chr4	+	2421	9	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	180	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	944.437919809979	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	138	False	NA	5	True	AATATA	-17	NA	40722738	40733900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40723002_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.33	chr4	+	1609	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	-29	4042	-29	-793	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCCCTGTATGTATG	292	False	NA	13	True	AATAAA	-19	NA	40722892	40733107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.34	chr4	+	1807	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	2	3813	2	-564	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGGTCTGTCTAGTTAT	-33	True	NA	NA	False	ATTAAA	-43	NA	40722923	40733336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.35	chr4	+	2367	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	6	3249	-2	0	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	-29	True	NA	5	True	AATATA	-17	NA	40722927	40733900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.36	chr4	+	3524	8	FSM	ENSMUSG00000028410.14	ENSMUST00000129204.8	4119	8	7	588	-1	-588	multi-exon	FALSE	canonical	3	76	junction_1	980.756538471757	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAAAAGAAAACAATTAG	-28	True	NA	NA	False	ATTAAA	-19	NA	40722928	40733312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.37	chr4	+	4885	3	NIC	ENSMUSG00000028410.14	novel	4119	8	NA	NA	2226	-794	intron_retention	FALSE	canonical	3	2858	junction_1	97	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	2232	False	NA	12	True	AATAAA	-18	NA	40726274	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40730288_40731683_40732177_40732727
ES.23166.38	chr4	+	1191	5	ISM	ENSMUSG00000028410.14	ENSMUST00000129204.8	4119	8	5121	455	3994	-455	3prime_fragment	FALSE	canonical	3	2693	junction_1	131.292374112132	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAAATGATTCATTCCT	939	False	NA	7	True	AATACA	-20	NA	40728042	40733445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.39	chr4	+	3463	3	NIC	ENSMUSG00000028410.14	novel	4119	8	NA	NA	4440	-2	intron_retention	FALSE	canonical	3	2858	junction_1	97	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTGTCACTGCAG	1385	False	NA	3	True	AATATA	-15	NA	40728488	40733898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40730288_40731683_40732177_40732727
ES.23166.4	chr4	+	1548	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-23	1851	-23	-787	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTATGTATGATGACT	1313	False	NA	19	True	AATAAA	-25	NA	40722456	40733113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.40	chr4	+	2617	3	NIC	ENSMUSG00000028410.14	novel	4119	8	NA	NA	4700	-588	intron_retention	FALSE	canonical	3	2858	junction_1	97	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAAAAGAAAACAATTAG	1645	False	NA	NA	False	ATTAAA	-19	NA	40728748	40733312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40730288_40731683_40732177_40732727
ES.23166.41	chr4	+	4040	3	ISM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	8818	543	7691	-543	3prime_fragment	FALSE	canonical	3	2944	junction_1	54	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGCTTTTCTAGTTT	450	False	NA	NA	False	AATATA	-12	NA	40731739	40736606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40731800_40732075_40732177_40732727
ES.23166.6	chr4	+	2499	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	-14	891	-14	173	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACTTCAACCAACCTGG	-21	True	NA	NA	False	AATAAA	-29	NA	40722465	40734073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.7	chr4	+	3276	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-12	-794	intron_retention	FALSE	canonical	3	1814	junction_2	376.940584285684	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCCCTGTATGTAT	-19	True	NA	12	True	AATAAA	-18	NA	40722467	40733106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.8	chr4	+	3307	9	NNC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	962.799231083511	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGTTCAGCATTTTA	-18	True	NA	NA	False	ATTAAA	-14	NA	40722468	40734965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40722553_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23166.9	chr4	+	3370	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	7	-1	7	1	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGTTCAGCATTTTA	0	True	NA	NA	False	ATTAAA	-14	NA	40722486	40734965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ES.23167.1	chr4	+	148	1	Intergenic	novelGene_19026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTCAGAACTT	NA	False	NA	NA	False	NA	NA	NA	40748020	40748168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40748000_40748200
ES.23168.1	chr4	-	2233	1	Antisense	novelGene_ENSMUSG00000028410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTGCCTGATCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	40722386	40720153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_40720200_40722400
ES.23169.1	chr4	-	5096	1	Antisense	novelGene_ENSMUSG00000028410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTCATTACTGCAATG	NA	False	NA	NA	False	NA	NA	NA	40731898	40726802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_40726800_40731900
ES.23169.2	chr4	-	304	1	Antisense	novelGene_ENSMUSG00000028410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	40727406	40727102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_40727100_40727400
ES.2317.1	chr10	+	9564	2	Antisense	novelGene_ENSMUSG00000019790.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTATGCCAAAGCTATCC	NA	False	NA	NA	False	NA	NA	NA	9764489	9774090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_9766243_9766279
ES.23170.1	chr4	-	2377	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	24	17	-16	-17	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAATCCTTGAAAATAG	8559	False	NA	44	True	ACTAAA	-17	NA	40757899	40736558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.10	chr4	-	1767	12	NNC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	13	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	380.583240968103	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAAGTGCTCATAAGGG	-14	True	NA	-15	True	AATAAA	-16	NA	40757870	40737117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744052_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.13	chr4	-	3665	10	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	-8	-639	intron_retention	FALSE	canonical	3	1190	junction_6	80.4304776088956	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGAGGAGCTTCGGA	17	True	NA	-20	True	CATAAA	-22	NA	40757839	40737180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.14	chr4	-	5477	3	FSM	ENSMUSG00000028409.12	ENSMUST00000150574.2	551	3	-45	-4881	7	4881	multi-exon	FALSE	canonical	3	1277	junction_1	53.5	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGGTTATTGTTTGA	-20	True	NA	NA	False	NA	NA	NA	40757876	40749494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40754661_40755626_40755838_40757776
ES.23170.15	chr4	-	3151	5	ISM	ENSMUSG00000028409.12	ENSMUST00000130503.8	1523	8	-10	5911	-10	4881	5prime_fragment	FALSE	canonical	3	1190	junction_1	77.8118724874296	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGGTTATTGTTTGA	8565	False	NA	NA	False	NA	NA	NA	40757893	40749494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.16	chr4	-	4200	2	Genic_Genomic	ENSMUSG00000028409.12	novel	2418	12	NA	NA	3306	4881	multi-exon	FALSE	non_canonical	0	0	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAGGTTATTGTTTGA	5888	False	NA	NA	False	NA	NA	NA	40754092	40749494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_40749929_40750326
ES.23170.17	chr4	-	3995	4	NIC	ENSMUSG00000028409.12	novel	1523	8	NA	NA	19	4844	intron_retention	FALSE	canonical	3	1190	junction_1	79.3403358254103	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	40757864	40749531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40752054_40753486_40754661_40755626_40755838_40757776
ES.23170.3	chr4	-	1832	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	25	561	-15	-561	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGAGGGAGAGTCGCT	8560	False	NA	0	True	AATAAA	-31	NA	40757898	40737102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.4	chr4	-	3194	11	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	-8	-573	intron_retention	FALSE	canonical	3	1215	junction_7	70.1638083344968	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGCTCATAAGGGGGA	17	True	NA	-12	True	AATAAA	-19	NA	40757839	40737114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.5	chr4	-	1483	10	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	26	-574	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	410.765891091204	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGCTCATAAGGGGG	-1	True	NA	-13	True	AATAAA	-18	NA	40757857	40737115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40737396_40738289_40738443_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.7	chr4	-	1762	12	NNC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	-23	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	382.267830473447	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAAGTGCTCATAAGGG	2	True	NA	-15	True	AATAAA	-16	NA	40757854	40737117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752043_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ES.23170.9	chr4	-	1592	11	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	-1	-576	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	388.074168168921	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAAGTGCTCATAAGGG	-28	True	NA	-15	True	AATAAA	-16	NA	40757884	40737117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40757776
ES.23171.1	chr4	-	198	1	Intergenic	novelGene_19027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40790037	40789839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_40789800_40790000
ES.23172.1	chr4	+	251	1	Intergenic	novelGene_19028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAATCTTCCAATA	NA	False	NA	NA	False	NA	NA	NA	40832833	40833084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40832800_40833100
ES.23173.1	chr4	-	4035	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	-52	0	-52	0	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	485	False	NA	-1	True	AATAAA	-18	NA	40854057	40804601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
ES.23173.10	chr4	-	1687	2	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	189	13260	189	-13260	5prime_fragment	FALSE	canonical	3	137	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGAAGCAAAAAAAAAGGG	726	False	NA	NA	False	CATAAA	-15	NA	40853816	40822413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40823675_40853390
ES.23173.2	chr4	-	4760	1	NIC	ENSMUSG00000028413.14	novel	3983	6	NA	NA	44644	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	NA	False	NA	-1	True	AATAAA	-18	NA	40809361	40804601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40804600_40809400
ES.23173.3	chr4	-	2978	7	NNC	ENSMUSG00000028413.14	novel	3983	6	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.4381309661873	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	497	False	NA	-1	True	AATAAA	-18	NA	40854045	40804601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40804887_40805931_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
ES.23173.7	chr4	-	709	3	NNC	ENSMUSG00000028413.14	novel	3983	6	NA	NA	212	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.5	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGCTTCTTTTCTTTT	-3	True	NA	-4	True	AATAAA	-15	NA	40853793	40804604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40804693_40823456_40823675_40853390
ES.23173.9	chr4	-	2048	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	97	1838	97	-1838	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATAGGTTGATTTTTG	634	False	NA	NA	False	AATAAA	-14	NA	40853908	40806439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
ES.23174.1	chr4	+	1234	1	Intergenic	novelGene_19029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAGCAAAAACAA	891	False	NA	NA	False	NA	NA	NA	40854265	40855499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40854300_40855500
ES.23175.1	chr4	+	157	1	Intergenic	novelGene_19030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	8197	False	NA	NA	False	NA	NA	NA	40861571	40861728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40861600_40861700
ES.23176.1	chr4	+	185	1	Intergenic	novelGene_19031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTAATCCCAACAG	NA	False	NA	NA	False	NA	NA	NA	40907802	40907987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40907800_40908000
ES.23177.1	chr4	+	165	1	Intergenic	novelGene_19032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGTACAATTGTTT	NA	False	NA	NA	False	NA	NA	NA	40911531	40911696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40911500_40911700
ES.23178.1	chr4	+	3955	4	NNC	ENSMUSG00000028415.5	novel	397	4	NA	NA	3511	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGTGAAGTGGCCCAG	3509	False	NA	NA	False	AATAAA	-12	NA	40923564	40931389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40923676_40924923_40928522_40929078_40929192_40931256
ES.23178.2	chr4	+	313	3	NNC	ENSMUSG00000028415.5	novel	397	4	NA	NA	3511	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGTGAAGTGGCCCAG	3509	False	NA	NA	False	AATAAA	-12	NA	40923564	40931389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40923704_40924923_40924965_40931256
ES.23179.1	chr4	+	178	1	Intergenic	novelGene_19033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAAATAAAAAGGCTA	NA	False	NA	NA	False	NA	NA	NA	40938852	40939030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40938900_40939000
ES.2318.1	chr10	-	2905	1	ISM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	142228	4	10493	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAAGAAGCCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	9634199	9631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_9631300_9634200
ES.2318.10	chr10	-	4981	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-562	4406	-166	5	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTATCATTTCAGTAA	5840	False	NA	1	True	ATTAAA	-16	NA	9776989	9635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.11	chr10	-	5838	28	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-128	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.53610422838054	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTTATCATTTCAGTA	5878	False	NA	0	True	ATTAAA	-15	NA	9776951	9635697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9654712_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.12	chr10	-	4913	27	NNC	ENSMUSG00000019790.18	novel	4702	26	NA	NA	-153	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	7.81176475830227	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTTATCATTTCAGTA	5853	False	NA	0	True	ATTAAA	-15	NA	9776976	9635697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.13	chr10	-	4926	28	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-94	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	8.61013534893751	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTATCATTTCAGT	5912	False	NA	-1	True	ATTAAA	-14	NA	9776917	9635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691981_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.14	chr10	-	4927	27	NIC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-164	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	6.49806525598242	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTTTTATCATTTCA	5842	False	NA	-3	True	ATTAAA	-12	NA	9776987	9635700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.15	chr10	-	4950	28	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-138	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	7.63484180110147	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCAGTGTTTTATCA	5868	False	NA	-8	True	ATTAAA	-7	NA	9776961	9635705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.16	chr10	-	4389	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-517	4953	-121	81	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGTCACTTTGTATCT	5885	False	NA	NA	False	AATAAA	-18	NA	9776944	9636243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.17	chr10	-	4252	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-167	617	-167	6	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGCCGTTGTATCTG	5839	False	NA	NA	False	ATTAAA	-18	NA	9776990	9636318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.18	chr10	-	4285	27	NIC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-141	5	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	6.49806525598242	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGCCGTTGTATCT	5865	False	NA	NA	False	ATTAAA	-17	NA	9776964	9636319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.19	chr10	-	4210	28	NNC	ENSMUSG00000019790.18	novel	4702	26	NA	NA	-125	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.44655023728025	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACTTTGTGCCGTTGT	5881	False	NA	NA	False	ATTAAA	-13	NA	9776948	9636323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645279_9646193_9646434_9653764_9653816_9654657_9654712_9654988_9655116_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.2	chr10	-	7184	28	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-161	-2204	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	7.63484180110147	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTGCACTTTCTTA	5845	False	NA	NA	False	AATAAA	-22	NA	9776984	9633494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.20	chr10	-	4165	26	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-130	-957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.99457614343222	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCATTCCTCTGTTTC	5876	False	NA	NA	False	AATAAA	-15	NA	9776953	9643909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9644740_9645084_9645279_9646193_9646434_9653764_9653816_9654657_9654712_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691981_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.21	chr10	-	2492	15	ISM	ENSMUSG00000019790.18	ENSMUST00000125200.8	3300	25	-523	47773	-127	7030	5prime_fragment	FALSE	canonical	3	13	junction_1	5.26249727325539	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTAAAAATATTCTTT	5879	False	NA	NA	False	AATATA	-19	NA	9776950	9684429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.3	chr10	-	7086	27	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-124	-2205	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	7.81176475830227	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTTCTGCACTTTCTT	5882	False	NA	NA	False	AATAAA	-21	NA	9776947	9633495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.4	chr10	-	4916	13	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-3207	2205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.3611790272352	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTCTGCACTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	9677148	9633496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9654657_9654712_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9677052
ES.2318.5	chr10	-	7267	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-650	2208	-254	2203	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATTTTTCTGCACTTT	5752	False	NA	NA	False	AATAAA	-18	NA	9777077	9633498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.6	chr10	-	7070	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-165	-2203	-165	2203	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATTTTTCTGCACTTT	5841	False	NA	NA	False	AATAAA	-18	NA	9776988	9633498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.7	chr10	-	7016	29	NNC	ENSMUSG00000019790.18	novel	8825	28	NA	NA	-124	2200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.52835457024593	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGAATTTTTCTGCAC	5882	False	NA	NA	False	AATAAA	-15	NA	9776947	9633501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645279_9646193_9646434_9653764_9653816_9654657_9654712_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742352_9742439_9774900_9774999_9776274
ES.2318.8	chr10	-	7036	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-537	2326	-141	2085	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	5865	False	NA	NA	False	AGTAAA	-17	NA	9776964	9633616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.2318.9	chr10	-	4869	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-162	-5	-162	5	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTATCATTTCAGTAA	5844	False	NA	1	True	ATTAAA	-16	NA	9776985	9635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ES.23180.1	chr4	+	204	1	Intergenic	novelGene_19034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGAAGAGCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	40943385	40943589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_40943400_40943600
ES.23181.1	chr4	-	2254	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-14	1112	at_least_one_novel_splicesite	FALSE	canonical	3	161	junction_7	669.499477983671	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCAAGGTGCTCTTCT	1	True	NA	NA	False	NA	NA	NA	40948308	40935285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948051_40948271
ES.23181.11	chr4	-	1139	8	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-15	-18	at_least_one_novel_splicesite	FALSE	canonical	1	50	junction_7	707.264347428072	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	0	True	NA	-27	True	AAAAAG	-19	NA	40948309	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721_40948068_40948271
ES.23181.12	chr4	-	2449	7	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-5	-18	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	780.216939204874	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	10	False	NA	-27	True	AAAAAG	-19	NA	40948299	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40940408_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.13	chr4	-	3130	2	ISM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	8240	18	8240	-18	intron_retention	FALSE	canonical	3	2102	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	8306	False	NA	-27	True	AAAAAG	-19	NA	40940003	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40936677_40937131
ES.23181.14	chr4	-	1287	7	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	-14	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	741.298785166203	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	-11	True	NA	-27	True	AAAAAG	-19	NA	40948257	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937187_40939072_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.16	chr4	-	1243	7	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	24	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	764.943443806287	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	27	True	NA	-27	True	AAAAAG	-19	NA	40948219	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936667_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.18	chr4	-	3627	6	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	4	-20	intron_retention	TRUE	canonical	2	7	junction_5	827.140278308341	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTAGACTTGTGTTTTC	19	False	40948309	-29	True	AAAAAG	-17	NA	40948290	40936420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40941639_40943624_40943708_40946168_40946263_40947721
ES.23181.19	chr4	-	1214	6	NIC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	4	-20	combination_of_known_splicesites	FALSE	canonical	3	213	junction_2	722.667115621017	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTAGACTTGTGTTTTC	19	False	40948309	-29	True	AAAAAG	-17	NA	40948290	40936420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40936677_40937131_40937195_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.20	chr4	-	5086	5	NIC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	4	-20	intron_retention	FALSE	canonical	3	1859	junction_3	177.277325115199	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTAGACTTGTGTTTTC	19	False	40948309	-29	True	AAAAAG	-17	NA	40948290	40936420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40936677_40937131_40937195_40939076_40941639_40943624_40943708_40946168
ES.23181.21	chr4	-	3764	6	NIC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	6	-24	intron_retention	FALSE	canonical	3	1821	junction_3	179.405016652266	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAATTAGACTTGTGT	-29	True	NA	-33	True	AAAAAG	-13	NA	40948275	40936424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40946298_40947721
ES.23181.23	chr4	-	1255	7	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	13	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	760.945774823819	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCTGAATTAGACTTGT	-22	True	NA	-35	True	AAAAAG	-11	NA	40948268	40936426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946259_40947721
ES.23181.24	chr4	-	889	4	ISM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	3	5133	3	-5131	5prime_fragment	FALSE	canonical	3	1859	junction_1	127.124610782754	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTGACTTCTCTAT	18	False	40948309	NA	False	AATAAA	-15	NA	40948291	40941531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.3	chr4	-	2312	8	NNC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	37	1108	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	724.312763653822	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGCTTCAAGGTGCTC	40	True	NA	NA	False	NA	NA	NA	40948206	40935289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40935703_40935759_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.4	chr4	-	1555	7	FSM	ENSMUSG00000028416.14	ENSMUST00000108089.8	1336	7	2	-221	2	221	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGAGTACCTTGCT	30	False	40948309	NA	False	GATAAA	-29	NA	40948279	40936176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.5	chr4	-	1425	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	-71	-6	-71	5	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGGTGGTGCCGTCC	NA	False	NA	-1	True	AAAAAG	-45	NA	40948365	40936392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.7	chr4	-	3658	6	NIC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	1859	junction_3	164.081199410536	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	27	False	40948309	-25	True	AAAAAG	-21	NA	40948282	40936416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_40936677_40937131_40937195_40939076_40941639_40943624_40943708_40946168_40946298_40947721
ES.23181.8	chr4	-	5209	5	ISM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	6	18	6	-16	intron_retention	FALSE	canonical	3	1821	junction_3	192.986236555875	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTGTGTTTTCTCAT	21	False	40948309	-25	True	AAAAAG	-21	NA	40948288	40936416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624
ES.23181.9	chr4	-	1307	7	NNC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	6	-18	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_3	776.559810245733	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGACTTGTGTTTTCTC	21	False	40948309	-27	True	AAAAAG	-19	NA	40948288	40936418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_40936677_40937131_40937195_40939076_40939170_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ES.23182.1	chr4	+	1207	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	34	278	34	-278	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGACTGCTGATAGTAT	34	False	NA	91	True	GATAAA	-14	NA	40948440	40965025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.11	chr4	+	4499	8	NNC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	152	-346	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	200.010611963364	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATGGTAGTGTAAGT	-4	True	NA	23	True	ATTAAA	-20	NA	40948558	40964957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40964022_40964166
ES.23182.2	chr4	+	1542	8	NNC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	43	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	200.483497208776	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	43	False	NA	7	True	AATAAA	-9	NA	40948449	40965296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40948750_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.3	chr4	+	1440	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	80	-1	80	1	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGTAGTATCGCTTTA	80	False	NA	15	True	AATAAA	-17	NA	40948486	40965304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.4	chr4	+	1404	8	NNC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	93	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	198.968564843591	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	1	True	NA	7	True	AATAAA	-9	NA	40948499	40965296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40948677_40949453_40949559_40950528_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.5	chr4	+	1575	8	NNC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	115	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	199.060241112676	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	-4	True	NA	7	True	AATAAA	-9	NA	40948521	40965296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40948677_40949453_40949559_40950513_40950739_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.6	chr4	+	6713	1	NIC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	134	-10050	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACAGAGAAATCTTAAC	-22	True	NA	NA	False	AAAAAG	-5	NA	40948540	40955253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40948500_40955300
ES.23182.7	chr4	+	1787	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	143	-411	143	411	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATCCTTTTCTTGTAA	-13	True	NA	NA	False	AATAAA	-14	NA	40948549	40965714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.8	chr4	+	3098	6	NIC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	146	-7	intron_retention	FALSE	canonical	3	527	junction_4	44.445922197655	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	-10	True	NA	7	True	AATAAA	-9	NA	40948552	40965296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23182.9	chr4	+	2143	7	NIC	ENSMUSG00000028419.6	novel	1519	8	NA	NA	146	-7	intron_retention	FALSE	canonical	3	527	junction_5	40.8030499949316	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	-10	True	NA	7	True	AATAAA	-9	NA	40948552	40965296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ES.23183.1	chr4	+	2494	1	Genic_Genomic	ENSMUSG00000028423.16	novel	NA	NA	NA	NA	-1604	-40374	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGTTTTGCATGGGGTA	4441	False	NA	NA	False	NA	NA	NA	40969301	40971795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_40969300_40971800
ES.23183.10	chr4	+	3412	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	55	882	55	381	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATAGCTCTTAAGTC	-31	True	NA	NA	False	NA	NA	NA	40970960	41012989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.11	chr4	+	3278	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	55	1016	55	247	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTGCTAGTTCTTT	-31	True	NA	NA	False	NA	NA	NA	40970960	41012855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.13	chr4	+	8192	14	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	65	-2	intron_retention	FALSE	canonical	0	0	junction_7	179.71110939571	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	-21	True	NA	14	True	NA	NA	NA	40970970	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40993855_40993962_40994181_40996814_40996913_40999684_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.14	chr4	+	4629	16	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	-20	True	NA	NA	False	AATAAA	-15	NA	40970971	41013871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ES.23183.15	chr4	+	4883	16	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	165.086993901868	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGCCTCTTCATTT	-20	True	NA	NA	False	AATAAA	-13	NA	40970971	41013869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011455
ES.23183.17	chr4	+	4545	24	NNC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	206.050739800664	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTTTATTGA	-20	True	NA	33	True	ATTAAA	-18	NA	40970971	41025992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004807_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.19	chr4	+	5296	24	NNC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.050739800664	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAACATTTTTTTAAA	-20	True	NA	NA	False	AATAAA	-40	NA	40970971	41026812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004876_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.2	chr4	+	3713	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	165.086993901868	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	6019	False	NA	15	True	NA	NA	NA	40970879	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011455
ES.23183.20	chr4	+	5128	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	831	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	205.66865352144	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAAGTTCTGCCTT	-20	True	NA	NA	False	AATAAA	-44	NA	40970971	41026824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.21	chr4	+	6954	22	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	-38	intron_retention	FALSE	canonical	3	180	junction_15	187.986948936679	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACTTGAAATCATTAAA	-20	True	NA	-4	True	AATAAA	-13	NA	40970971	41025955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.22	chr4	+	3498	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	205.66865352144	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATAGTCTGGTTGTCC	-20	True	NA	25	True	GATAAA	-36	NA	40970971	41025194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.23	chr4	+	5232	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	167.783988111699	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	-20	True	NA	14	True	NA	NA	NA	40970971	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41009843
ES.23183.24	chr4	+	3279	21	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	66	3472	66	200	5prime_fragment	FALSE	canonical	3	177	junction_17	187.170670779372	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTGTATATTAAGAATAA	-20	True	NA	NA	False	AATAAA	-21	NA	40970971	41022521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259
ES.23183.25	chr4	+	3447	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	66	1081	66	-266	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGGAGACTCATTTGCC	-20	True	NA	NA	False	TATAAA	-17	NA	40970971	41024912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.26	chr4	+	4811	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	68	-1262	68	-1	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCCTCTTCATTTT	-18	True	NA	NA	False	AATAAA	-14	NA	40970973	41013870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ES.23183.27	chr4	+	3773	16	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	68	409	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTTTGTGT	-18	True	NA	NA	False	TATAAA	-1	NA	40970973	41013017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ES.23183.28	chr4	+	3363	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	68	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	-18	True	NA	15	True	NA	NA	NA	40970973	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ES.23183.29	chr4	+	5168	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	68	-1	intron_retention	FALSE	canonical	3	177	junction_16	191.817557086445	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTTTATTGA	-18	True	NA	33	True	ATTAAA	-18	NA	40970973	41025992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.3	chr4	+	5478	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	7	-891	7	891	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATAGACTTGTCCCCC	6052	False	NA	NA	False	ATTAAA	-19	NA	40970912	41026884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.30	chr4	+	5165	15	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	68	0	intron_retention	FALSE	canonical	0	0	junction_1	173.383025320784	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-18	True	NA	16	True	NA	NA	NA	40970973	41012608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971142_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.33	chr4	+	4499	23	NNC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	73	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	214.426758383239	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGGCACTTAATTTTT	-13	True	NA	13	True	AATAAA	-30	NA	40970978	41025972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996943_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.34	chr4	+	2832	15	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	73	2969	73	-2530	5prime_fragment	FALSE	canonical	3	463	junction_8	95.649444988095	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTGTATGAGTGTTT	-13	True	NA	NA	False	AATAAA	-23	NA	40970978	41009639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189
ES.23183.35	chr4	+	3658	24	NNC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	73	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	206.050739800664	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGGCACCTAGCCAT	-13	True	NA	12	True	GATAAA	-23	NA	40970978	41025181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004876_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.36	chr4	+	5422	15	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	73	-2	intron_retention	FALSE	canonical	3	92	junction_14	154.110896329062	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	-13	True	NA	14	True	NA	NA	NA	40970978	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ES.23183.37	chr4	+	3988	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	73	373	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	165.086993901868	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCCTCCTGTGATAGCT	-13	True	NA	NA	False	NA	NA	NA	40970978	41012981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011455
ES.23183.38	chr4	+	3601	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	73	242	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTCCTGTGCTAGT	-13	True	NA	NA	False	NA	NA	NA	40970978	41012850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
ES.23183.39	chr4	+	1406	3	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	73	27381	73	-26942	5prime_fragment	FALSE	canonical	3	562	junction_1	20.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCTTACACATTCT	-13	True	NA	NA	False	NA	NA	NA	40970978	40985227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892
ES.23183.4	chr4	+	3598	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	18	1	18	-1	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	6063	False	NA	15	True	NA	NA	NA	40970923	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ES.23183.40	chr4	+	3946	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	74	405	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	167.992248498422	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTGTGTGTGTGTTT	-12	True	NA	NA	False	NA	NA	NA	40970979	41013013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011528
ES.23183.41	chr4	+	3390	15	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	74	379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	173.861544726526	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGTGATAGCTCTTAAG	-12	True	NA	NA	False	NA	NA	NA	40970979	41012987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996943_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.43	chr4	+	4193	22	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	81	-15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	203.148293187374	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTTAATTTTTACTTGT	-5	True	NA	19	True	AATAAA	-36	NA	40970986	41025978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.44	chr4	+	5789	15	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	83	2	83	-2	intron_retention	FALSE	canonical	3	463	junction_8	95.649444988095	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	-3	True	NA	14	True	NA	NA	NA	40970988	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189
ES.23183.45	chr4	+	3031	17	NNC	ENSMUSG00000028423.16	novel	4349	16	NA	NA	85	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	206.796850798072	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	-1	True	NA	15	True	NA	NA	NA	40970990	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41000858_41000890_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.46	chr4	+	6439	22	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	85	0	intron_retention	FALSE	canonical	3	177	junction_16	189.089200177014	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	-1	True	NA	34	True	ATTAAA	-19	NA	40970990	41025993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41023760_41024473_41024579_41024800
ES.23183.47	chr4	+	3148	21	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	85	3584	85	88	5prime_fragment	FALSE	canonical	3	177	junction_17	187.170670779372	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCCTAGAGGGTTGTAG	-1	True	NA	NA	False	AATAAA	-16	NA	40970990	41022409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259
ES.23183.48	chr4	+	5066	15	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	85	0	intron_retention	FALSE	canonical	3	463	junction_7	93.4577280848166	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-1	True	NA	16	True	NA	NA	NA	40970990	41012608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.5	chr4	+	3771	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	24	799	24	16	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATAGTCTGGTTGTCC	6069	False	NA	25	True	GATAAA	-36	NA	40970929	41025194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.53	chr4	+	1826	6	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	98	-22198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.342293054363	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTGTTAAGTGAAT	12	True	NA	NA	False	AATAAA	-18	NA	40971003	40989971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971196_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40989670
ES.23183.54	chr4	+	8931	2	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	98	27381	98	-26942	intron_retention	FALSE	canonical	3	562	junction_1	0	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCTTACACATTCT	12	True	NA	NA	False	NA	NA	NA	40971003	40985227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352
ES.23183.55	chr4	+	1687	6	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	101	-22198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	223.355680473992	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTGTTAAGTGAAT	15	True	NA	NA	False	AATAAA	-18	NA	40971006	40989971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40989670
ES.23183.57	chr4	+	5951	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	111	825	intron_retention	FALSE	canonical	3	177	junction_16	191.817557086445	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTTTTTAAAAAGTTC	25	True	NA	NA	False	AATAAA	-38	NA	40971016	41026818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.58	chr4	+	7467	23	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	112	-2763	112	2763	intron_retention	FALSE	canonical	3	177	junction_17	192.805172935645	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGTCACGTTTTCA	26	True	NA	NA	False	NA	NA	NA	40971017	41028756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473
ES.23183.59	chr4	+	2834	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	112	1403	112	-140	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACATGCATGTATTCA	26	True	NA	NA	False	NA	NA	NA	40971017	41012468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.6	chr4	+	4379	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	43	0	intron_retention	FALSE	canonical	3	177	junction_16	191.817557086445	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTTGTGGCACCTAGC	6088	False	NA	9	True	GATAAA	-20	NA	40970948	41025178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.60	chr4	+	4233	22	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	5629	147	intron_retention	FALSE	canonical	3	177	junction_15	194.123706963993	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGATGTCTCTAGAC	5543	False	NA	NA	False	NA	NA	NA	40976534	41025325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.63	chr4	+	1945	14	ISM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	13983	1264	13983	-1	3prime_fragment	FALSE	canonical	3	463	junction_6	99.0498051756057	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	NA	False	NA	15	True	NA	NA	NA	40984888	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.64	chr4	+	6565	10	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	-12851	-1	intron_retention	FALSE	canonical	3	26	junction_9	207.597069367264	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	NA	False	NA	15	True	NA	NA	NA	40989658	41012607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ES.23183.65	chr4	+	3949	17	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	20985	814	-10619	1	3prime_fragment	FALSE	canonical	3	177	junction_10	211.060186543436	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTGGCACCTAGCC	NA	False	NA	10	True	GATAAA	-21	NA	40991890	41025179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.66	chr4	+	3203	9	ISM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	21035	1265	-10569	-2	3prime_fragment	FALSE	canonical	3	463	junction_1	119.538631308042	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	NA	False	NA	14	True	NA	NA	NA	40991940	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.67	chr4	+	4665	8	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	-8727	0	intron_retention	FALSE	canonical	3	463	junction_1	124.924466974967	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	NA	False	NA	16	True	NA	NA	NA	40993782	41012608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_40993859_40993962_40994181_40996814_40996913_40999684_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.68	chr4	+	2800	5	FSM	ENSMUSG00000028423.16	ENSMUST00000143798.2	1009	5	-89	-1702	-89	0	multi-exon	FALSE	canonical	3	525	junction_4	108.297045204382	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	1430	False	NA	NA	False	AATAAA	-15	NA	41002420	41013871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.69	chr4	+	4906	1	NIC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	-1506	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTTGTCAGGC	6710	False	NA	14	True	NA	NA	NA	41007700	41012606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41007700_41012600
ES.23183.7	chr4	+	3037	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	49	1263	49	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	6094	False	NA	16	True	NA	NA	NA	40970954	41012608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.70	chr4	+	1343	10	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	38281	799	-20	16	3prime_fragment	FALSE	canonical	3	177	junction_3	13.4412301024373	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATAGTCTGGTTGTCC	8196	False	NA	25	True	GATAAA	-36	NA	41009186	41025194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23183.71	chr4	+	4395	4	NIC	ENSMUSG00000028423.16	novel	859	6	NA	NA	-1116	-1	intron_retention	FALSE	canonical	3	194	junction_1	5.55777733351102	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTTTATTGA	NA	False	NA	33	True	ATTAAA	-18	NA	41020249	41025992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41021848_41022259_41023760_41024473_41024579_41024800
ES.23183.72	chr4	+	154	1	Intergenic	novelGene_19036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTAGCTAGCTA	NA	False	NA	NA	False	NA	NA	NA	41021192	41021346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41021200_41021300
ES.23183.8	chr4	+	4302	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	49	-2	49	2	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTCTTCATTTTTAA	6094	False	NA	NA	False	AATAAA	-17	NA	40970954	41013873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ES.23183.9	chr4	+	4545	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	49	0	49	0	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	6094	False	NA	34	True	ATTAAA	-19	NA	40970954	41025993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ES.23184.1	chr4	-	7480	4	Antisense	novelGene_ENSMUSG00000092862.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAATGCTGAATACAGCG	NA	False	NA	NA	False	AAAAAG	-23	NA	40998286	40986219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_40986766_40988614_40993859_40993962_40994179_40996812
ES.23185.1	chr4	-	4396	5	Antisense	novelGene_ENSMUSG00000028423.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAATCCAGCCTCATT	NA	False	NA	NA	False	NA	NA	NA	41017156	41000964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_41003097_41004326_41004437_41004825_41004943_41009186_41009268_41015200
ES.23185.2	chr4	-	188	1	Intergenic	novelGene_19035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	41006989	41006801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41006800_41007000
ES.23186.1	chr4	+	180	1	Intergenic	novelGene_19037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGCTGACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	41029726	41029906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41029700_41029900
ES.23187.1	chr4	-	2083	5	ISM	ENSMUSG00000028427.14	ENSMUST00000054945.8	2154	6	9213	0	75	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.707106781186548	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTGTGTGTCTTCCA	9179	False	NA	NA	False	NA	NA	NA	41036235	41033073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41034460_41034753_41034972_41035134_41035254_41035492_41035631_41036013
ES.23187.2	chr4	-	2496	7	NNC	ENSMUSG00000028427.14	novel	2527	8	NA	NA	-1291	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.74535599249993	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATGTACTGTGTGTCTT	1417	False	NA	NA	False	NA	NA	NA	41046739	41033076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41034482_41034753_41034972_41035134_41035254_41035492_41035631_41036013_41036138_41045279_41045416_41046383
ES.23187.3	chr4	-	781	1	NIC	ENSMUSG00000028427.14	novel	2154	6	NA	NA	118	-277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAGAAAAAAAAAAA	9222	False	NA	NA	False	NA	NA	NA	41036192	41035411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41035400_41036200
ES.23188.1	chr4	+	155	1	Intergenic	novelGene_19038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4019	False	NA	NA	False	NA	NA	NA	41049547	41049702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41049500_41049700
ES.23189.1	chr4	-	186	1	Intergenic	novelGene_19039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGACAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	41051854	41051668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41051700_41051900
ES.2319.1	chr10	-	2079	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	27	43	27	-43	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	10433982	10420788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_10422196_10426422_10426701_10433588
ES.2319.2	chr10	-	1917	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	-3	235	-3	-235	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGTGTGTTGAATGAA	NA	False	NA	NA	False	AATAAA	-12	NA	10434012	10420980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_10422196_10426422_10426701_10433588
ES.23190.1	chr4	+	177	1	Intergenic	novelGene_19040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAGAAAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	41060722	41060899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41060700_41060900
ES.23191.1	chr4	+	196	1	Intergenic	novelGene_19041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAGTGAAC	3525	False	NA	NA	False	NA	NA	NA	41071374	41071570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41071400_41071600
ES.23192.1	chr4	-	160	1	Intergenic	novelGene_19042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAATTTAA	NA	False	NA	NA	False	NA	NA	NA	41074251	41074091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41074100_41074300
ES.23193.1	chr4	+	2090	1	Intergenic	novelGene_19043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATAAA	-33	NA	41077859	41079949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41077900_41079900
ES.23194.1	chr4	+	2230	1	Intergenic	novelGene_19044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGTATTTTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	41087469	41089699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41087500_41089700
ES.23195.1	chr4	-	2034	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	-265	-4	-265	4	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTTTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	41098448	41092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ES.23195.10	chr4	-	1754	6	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	781.26932616096	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTCTTTTTGTGTGTGT	-2	True	NA	-7	True	AATAAA	-18	NA	41098184	41092724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098010
ES.23195.11	chr4	-	4877	3	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	2044	junction_1	5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTCTTTTTGTGTGTGT	-1	True	NA	-7	True	AATAAA	-18	NA	41098183	41092724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41094000_41094265_41094385_41094700
ES.23195.12	chr4	-	2379	4	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	4	-4	intron_retention	FALSE	canonical	3	1694	junction_1	148.786946858774	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTTCTTTTTGTGTGTG	3	True	NA	-8	True	AATAAA	-17	NA	41098179	41092725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41093703_41093781_41094000_41094265_41095272_41098001
ES.23195.14	chr4	-	2411	3	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	1957	junction_2	48.5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTTCTTTTTGTGTGT	-1	True	NA	-9	True	AATAAA	-16	NA	41098183	41092726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41094385_41094700_41095272_41098001
ES.23195.2	chr4	-	4491	5	ISM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	4	0	4	0	intron_retention	FALSE	canonical	3	1694	junction_1	145.196418688616	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	3	True	NA	-4	True	AATAAA	-21	NA	41098179	41092721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144
ES.23195.3	chr4	-	2080	5	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1694	junction_1	128.989098376568	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTTTGTGTGTGTTT	-1	True	NA	-5	True	AATAAA	-20	NA	41098183	41092722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41093703_41093781_41094000_41094265_41094839_41095144_41095272_41098001
ES.23195.4	chr4	-	2064	5	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	-222	-2	intron_retention	FALSE	canonical	3	1912	junction_3	59.5246797555434	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	41098405	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ES.23195.5	chr4	-	5460	1	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	936	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	-1	True	NA	-6	True	AATAAA	-19	NA	41098183	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41092700_41098200
ES.23195.6	chr4	-	2647	3	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	4	-2	intron_retention	FALSE	canonical	3	1694	junction_1	131.5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	3	True	NA	-6	True	AATAAA	-19	NA	41098179	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41093703_41093781_41095272_41098001
ES.23195.7	chr4	-	1756	6	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	770.766787037428	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	-1	True	NA	-6	True	AATAAA	-19	NA	41098183	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41093703_41093781_41093993_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ES.23195.8	chr4	-	2136	5	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	-67	-2	intron_retention	FALSE	canonical	3	1694	junction_1	145.419006666942	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	41098250	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41095272_41098001
ES.23195.9	chr4	-	1744	6	NNC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	769.39914218824	936	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTTTTTGTGTGTGTT	-1	True	NA	-6	True	AATAAA	-19	NA	41098183	41092723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41093703_41093781_41094000_41094265_41094385_41094719_41094839_41095144_41095272_41098001
ES.23196.1	chr4	-	4471	27	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	137	9795	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.7531464003093	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTAAATCTAGAGGAC	NA	False	NA	NA	False	NA	NA	NA	41124318	41104631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41104648_41114433_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.10	chr4	-	3614	18	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	1635	0	intron_retention	FALSE	canonical	3	287	junction_8	37.0726398147929	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	3185	False	NA	-4	True	NA	NA	NA	41121119	41114426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006
ES.23196.11	chr4	-	4543	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	140	0	intron_retention	FALSE	canonical	3	287	junction_9	35.4575009694705	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	-11	True	NA	-4	True	NA	NA	NA	41124315	41114426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.12	chr4	-	2954	12	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	3098	0	intron_retention	FALSE	canonical	3	287	junction_9	38.3591121847639	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	4648	False	NA	-4	True	NA	NA	NA	41119656	41114426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119313_41119412
ES.23196.15	chr4	-	4591	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	137	0	intron_retention	FALSE	canonical	3	287	junction_8	32.5600940143333	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	NA	False	NA	-4	True	NA	NA	NA	41124318	41114426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.17	chr4	-	4498	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	176	-1	intron_retention	FALSE	canonical	3	306	junction_15	31.7042540082908	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	25	False	41124289	-5	True	NA	NA	NA	41124279	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.19	chr4	-	5107	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	166	-1	intron_retention	FALSE	canonical	3	287	junction_8	35.1387873296732	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	0	True	NA	-5	True	NA	NA	NA	41124289	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.2	chr4	-	195	1	Intergenic	novelGene_19045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAATTATTTGAATCAAA	4852	False	NA	NA	False	NA	NA	NA	41109839	41109644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41109600_41109800
ES.23196.21	chr4	-	4318	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	178	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	80.4090130209294	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	27	False	41124289	-5	True	NA	NA	NA	41124277	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.22	chr4	-	4431	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	155	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	77.5092252573847	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	4	True	NA	-5	True	NA	NA	NA	41124300	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117406_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.23	chr4	-	4605	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	160	-1	intron_retention	FALSE	canonical	3	287	junction_8	35.1940799551414	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	9	True	NA	-5	True	NA	NA	NA	41124295	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.24	chr4	-	6457	21	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	176	-1	intron_retention	FALSE	canonical	3	287	junction_7	35.2937671551224	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	25	False	41124289	-5	True	NA	NA	NA	41124279	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120783_41121006_41121128_41121210_41121366_41121451_41121948_41122123_41123376_41123458_41123660_41124158
ES.23196.25	chr4	-	4585	25	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	167	-1	intron_retention	FALSE	canonical	0	0	junction_20	80.5729052197794	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	1	True	NA	-5	True	NA	NA	NA	41124288	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121328_41121451_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.27	chr4	-	4295	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	178	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	79.1159047782991	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	27	False	41124289	-5	True	NA	NA	NA	41124277	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.28	chr4	-	4438	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	199	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	79.2779010822057	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	-2	True	NA	-5	True	NA	NA	NA	41124256	41114427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122343_41123258_41123376_41123458_41123660_41124158
ES.23196.29	chr4	-	4508	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	175	-2	intron_retention	FALSE	canonical	3	287	junction_9	34.1912259294041	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	24	False	41124289	-6	True	NA	NA	NA	41124280	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.3	chr4	-	5501	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	148	-1050	148	1050	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGTTATGTGTTTAA	-3	True	NA	NA	False	AATAAA	-21	NA	41124307	41113376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.30	chr4	-	5234	21	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	199	-2	intron_retention	FALSE	canonical	3	287	junction_8	35.2591832009762	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	-2	True	NA	-6	True	NA	NA	NA	41124256	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.31	chr4	-	4858	23	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	186	-2	intron_retention	FALSE	canonical	3	287	junction_8	35.663399994582	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	-15	True	NA	-6	True	NA	NA	NA	41124269	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120783_41121006_41121128_41121210_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.33	chr4	-	3450	20	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	1333	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.7189859643564	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	2883	False	NA	-6	True	NA	NA	NA	41121421	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118193_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210
ES.23196.34	chr4	-	4368	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	178	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2688993237575	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	27	False	41124289	-6	True	NA	NA	NA	41124277	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115732_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.36	chr4	-	4463	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	141	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	79.2372033832593	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGACTTGTCTTTCCTC	-10	True	NA	-6	True	NA	NA	NA	41124314	41114428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121203_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.39	chr4	-	4390	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	197	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5276363627836	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGACTTGTCTTTCCT	-4	True	NA	-7	True	NA	NA	NA	41124258	41114429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116457_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.4	chr4	-	5270	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	155	-826	155	826	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGGTTGGTGTGGTACTT	4	True	NA	NA	False	NA	NA	NA	41124300	41113600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.40	chr4	-	4429	26	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	174	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	78.7967918128651	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCTGACTTGTCTTTCC	23	False	41124289	-8	True	NA	NA	NA	41124281	41114430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120398_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.41	chr4	-	5201	24	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	194	-8	intron_retention	FALSE	canonical	3	287	junction_7	32.970170398496	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTACCTGACTTGTCT	-7	True	NA	-12	True	NA	NA	NA	41124261	41114434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.42	chr4	-	3336	20	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	169	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.845993651648	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTACCTGACTTGT	18	False	NA	-14	True	NA	NA	NA	41124286	41114436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115199_41118102_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.43	chr4	-	4764	24	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	146	-10	intron_retention	FALSE	canonical	3	287	junction_8	33.2120414540048	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTACCTGACTTGT	-5	True	NA	-14	True	NA	NA	NA	41124309	41114436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.5	chr4	-	4602	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	1	-4	1	4	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTTTCCTCTTGATT	NA	False	NA	0	True	NA	NA	NA	41124454	41114422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.6	chr4	-	2226	14	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	153	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.326862255035	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTCTTTCCTCTTGA	2	True	NA	-2	True	NA	NA	NA	41124302	41114424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41114947_41119849_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23196.7	chr4	-	4600	27	NNC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	213	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	102.591631722126	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTCTTTCCTCTTGA	12	True	NA	-2	True	NA	NA	NA	41124242	41114424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41122413_41122626_41123258_41123376_41123458_41123660_41124158
ES.23196.9	chr4	-	4610	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	181	0	intron_retention	FALSE	canonical	3	287	junction_9	35.4561544571445	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	30	False	41124289	-4	True	NA	NA	NA	41124274	41114426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ES.23197.1	chr4	+	140	1	Intergenic	novelGene_19046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACTTTCATATC	NA	False	NA	NA	False	NA	NA	NA	41125143	41125283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41125100_41125300
ES.23198.1	chr4	-	170	1	Intergenic	novelGene_19047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTAAATTCCTA	NA	False	NA	NA	False	NA	NA	NA	41128133	41127963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41128000_41128100
ES.23199.1	chr4	+	2262	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-421	1759	-421	585	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTTGCTATTTATTT	NA	False	NA	37	True	AATAAA	-26	NA	41135321	41191621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.10	chr4	+	3314	6	NNC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.20152904603	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	54	False	NA	NA	False	AATAAA	-17	NA	41135909	41193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41135960_41136078_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.12	chr4	+	2883	4	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	269	1766	269	578	intron_retention	FALSE	canonical	3	483	junction_2	22.9540604009158	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGAGCACTTGGTTGCTA	-20	True	NA	30	True	AATAAA	-19	NA	41136011	41191614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151
ES.23199.13	chr4	+	178	1	Intergenic	novelGene_19048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTTCAG	NA	False	NA	NA	False	NA	NA	NA	41163324	41163502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41163300_41163500
ES.23199.14	chr4	+	137	1	Intergenic	novelGene_19049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAAACAAAATTA	NA	False	NA	NA	False	NA	NA	NA	41166917	41167054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41166900_41167100
ES.23199.15	chr4	+	177	1	Intergenic	novelGene_19050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAACCATTTAGATAA	NA	False	NA	NA	False	NA	NA	NA	41176995	41177172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41177000_41177200
ES.23199.2	chr4	+	1778	6	NNC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-311	574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.20152904603	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAACCGAGCACTTGGTT	NA	False	NA	26	True	AATAAA	-15	NA	41135431	41191610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41135604_41135966_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.3	chr4	+	1804	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-238	2034	-238	310	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGCCAAGGGTTAG	-9	True	NA	NA	False	AAAACA	-20	NA	41135504	41191346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.4	chr4	+	3834	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-234	0	-234	0	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	-5	True	NA	NA	False	AATAAA	-17	NA	41135508	41193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.5	chr4	+	1973	6	NNC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-231	576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.20152904603	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGCACTTGGTTGC	-2	True	NA	28	True	AATAAA	-17	NA	41135511	41191612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41135830_41135919_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ES.23199.6	chr4	+	1905	4	NIC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-160	576	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	225.746662335361	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGCACTTGGTTGC	-21	True	NA	28	True	AATAAA	-17	NA	41135582	41191612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41136247_41183244_41183343_41189151_41189287_41190604
ES.23199.7	chr4	+	3660	4	NIC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-158	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	217.288338900693	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	-19	True	NA	NA	False	AATAAA	-17	NA	41135584	41193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41136247_41174040_41174128_41189151_41189287_41190604
ES.23199.8	chr4	+	3568	6	NNC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.20152904603	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	30	True	NA	NA	False	AATAAA	-17	NA	41135633	41193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604_41190828_41190968
ES.23199.9	chr4	+	1749	2	NNC	ENSMUSG00000036241.4	novel	3600	5	NA	NA	-77	-21034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGAAAAAGCAGTAGA	9	False	NA	NA	False	AATAAA	-14	NA	41135665	41169789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41136247_41168621
ES.232.1	chr1	+	1940	1	Antisense	novelGene_ENSMUSG00000042182.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	1194	False	NA	NA	False	NA	NA	NA	33912775	33914715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_33912800_33914700
ES.2320.1	chr10	+	7038	31	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-96	977	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	28.5476015727338	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025074	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025248_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11081590_11081663_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.10	chr10	+	5729	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	57	3485	14	-187	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTTGTTACTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	11025230	11089854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.13	chr10	+	5059	28	FSM	ENSMUSG00000090112.9	ENSMUST00000054814.14	7225	28	-28	2194	23	-2194	multi-exon	FALSE	canonical	3	69	junction_26	12.4870303085212	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCTGTCTGATTTTTA	NA	False	NA	NA	False	TTTAAA	-19	NA	11025239	11083102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840
ES.2320.14	chr10	+	9212	30	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	19.1573992311903	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	11025239	11093339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.15	chr10	+	3887	8	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	70	22889	24	-4802	intron_retention	FALSE	canonical	3	73	junction_3	11.1849023606076	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTTTCATGCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	11025240	11041005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552
ES.2320.16	chr10	+	6770	29	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	24	968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.8532948991585	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAATTATGGATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	11025240	11091009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070119_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.17	chr10	+	6955	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	24	968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	20.2799081114369	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAATTATGGATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	11025240	11091009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062043_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.18	chr10	+	8840	28	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	24	977	intron_retention	FALSE	canonical	1	1	junction_6	20.6943926588133	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025240	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.19	chr10	+	3006	2	FSM	ENSMUSG00000090112.9	ENSMUST00000161858.2	3028	2	24	-2	24	2	multi-exon	FALSE	canonical	3	95	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	11025240	11030272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356
ES.2320.2	chr10	+	6924	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-54	977	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	19.5164493564165	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025116	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025248_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.20	chr10	+	4651	21	ISM	ENSMUSG00000090112.9	ENSMUST00000054814.14	7225	28	-27	20845	24	557	5prime_fragment	FALSE	canonical	3	71	junction_8	10.2640148090306	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCTTGTCTAAAATGCC	NA	False	NA	NA	False	AATAAA	-18	NA	11025240	11064451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683
ES.2320.21	chr10	+	3458	6	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	70	25400	24	-7313	intron_retention	FALSE	canonical	3	73	junction_3	10.5375518978556	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATCAATTATTTTGAAT	NA	False	NA	NA	False	AATAAA	-16	NA	11025240	11038494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210
ES.2320.22	chr10	+	6881	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	24	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	20.3010048192357	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025240	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045891_11045996_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.23	chr10	+	6885	30	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	24	972	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	19.1573992311903	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTATGGATTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	11025240	11091013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.24	chr10	+	4163	21	ISM	ENSMUSG00000090112.9	ENSMUST00000054814.14	7225	28	-27	21333	24	69	5prime_fragment	FALSE	canonical	3	71	junction_8	10.2640148090306	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGGAGACTGTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	11025240	11063963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683
ES.2320.25	chr10	+	4008	13	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	70	16730	24	1357	5prime_fragment	FALSE	canonical	3	71	junction_8	11.0034716743803	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGATCAAGTAGGAGAATA	NA	False	NA	NA	False	AATAAA	-12	NA	11025240	11047164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990
ES.2320.27	chr10	+	6458	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	71	2742	-23	556	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGCTTTTCTGTGTAT	NA	False	NA	NA	False	ATTAAA	-31	NA	11025244	11090597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.28	chr10	+	6943	31	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-20	972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	25.0079098597935	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTATGGATTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	11025247	11091013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11081590_11081663_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.29	chr10	+	6736	30	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-18	968	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	19.8640444419897	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAATTATGGATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	11025249	11091009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063781_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.3	chr10	+	9224	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	19.5164493564165	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGTTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	11025136	11093338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025248_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.30	chr10	+	5249	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	76	3946	-18	-648	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGTTGAATGAATTT	NA	False	NA	NA	False	ATTAAA	-32	NA	11025249	11089393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.31	chr10	+	7084	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	76	2111	-18	1187	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGATTCCTTTCTCAAT	NA	False	NA	NA	False	AATAAA	-31	NA	11025249	11091228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.32	chr10	+	4042	12	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	80	16790	-17	1297	intron_retention	FALSE	canonical	3	71	junction_8	10.4888764377134	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGTACTATTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	11025250	11047104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722
ES.2320.34	chr10	+	6112	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-15	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	25.1792149527373	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTTGTATCCTAGCC	NA	False	NA	NA	False	NA	NA	NA	11025252	11090274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11081590_11081663_11082840_11083020_11088065_11088147_11089191
ES.2320.35	chr10	+	9480	30	NNC	ENSMUSG00000090112.9	novel	3467	21	NA	NA	98	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.6981471731558	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCAATTTTGTGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	11025365	11093330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025741_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070119_11080929_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.36	chr10	+	6896	30	NNC	ENSMUSG00000090112.9	novel	3467	21	NA	NA	226	972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.3770055292742	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTATGGATTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	11025493	11091013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025602_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.37	chr10	+	5521	29	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	2256	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	20.1475425148517	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATTGTACTGAATTCA	NA	False	NA	NA	False	TTTAAA	-3	NA	11027523	11090042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063781_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.39	chr10	+	2961	13	ISM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	14925	-555	7	555	3prime_fragment	FALSE	canonical	3	9	junction_6	23.6132025217532	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATACCTTGTCTAAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	11040095	11064449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683
ES.2320.4	chr10	+	6977	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	-27	2321	-24	977	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025146	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.40	chr10	+	3941	21	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	31	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.7459127529463	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTACTGAATTCATTT	NA	False	NA	NA	False	TTTAAA	-6	NA	11040119	11090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11047616_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.43	chr10	+	8431	16	NIC	ENSMUSG00000090112.9	novel	3467	21	NA	NA	4567	-3	intron_retention	FALSE	canonical	3	9	junction_1	24.4743857033339	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTTGTGTTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	11046767	11093336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.45	chr10	+	3670	8	NIC	ENSMUSG00000090112.9	novel	3467	21	NA	NA	-15294	972	intron_retention	FALSE	canonical	3	87	junction_4	11.2974622398672	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTATGGATTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	11065468	11091013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.46	chr10	+	2401	1	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	-11514	7755	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGTTTAGGGGGC	NA	False	NA	NA	False	AAAAAG	-25	NA	11069248	11071649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11069200_11071600
ES.2320.47	chr10	+	5823	5	ISM	ENSMUSG00000090112.9	ENSMUST00000159553.8	3467	21	27721	-3296	-10841	-2	intron_retention	FALSE	canonical	3	69	junction_2	14.2543852901484	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTGTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	11069921	11093337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065
ES.2320.48	chr10	+	4884	1	Intergenic	novelGene_1766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTGTAAAGTGACTC	NA	False	NA	NA	False	NA	NA	NA	11075286	11080170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11075300_11080200
ES.2320.49	chr10	+	7902	4	NIC	ENSMUSG00000090112.9	novel	3467	21	NA	NA	-2159	-2	intron_retention	FALSE	canonical	3	87	junction_3	7.78888096369861	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTGTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	11078603	11093337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.5	chr10	+	6802	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	13	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	25.6822715609951	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025186	11091018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063770_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070119_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.50	chr10	+	205	1	Intergenic	novelGene_1767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCTTTATTACAGTGGA	NA	False	NA	NA	False	NA	NA	NA	11086560	11086765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11086600_11086800
ES.2320.51	chr10	+	5839	2	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	9675	9335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11090437	11102674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11094150_11100547
ES.2320.52	chr10	+	2544	1	ISM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	65490	132	9901	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGCTTAACCTAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	11090663	11093207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11090700_11093200
ES.2320.6	chr10	+	6208	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	15	3048	15	250	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTGTGTTGGAATATAAA	NA	False	NA	NA	False	NA	NA	NA	11025188	11090291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.7	chr10	+	5966	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	25	3280	-18	18	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTTGTGTTCCTGTA	NA	False	NA	NA	False	TTTAAA	-20	NA	11025198	11090059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.8	chr10	+	9242	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	25	4	-18	-4	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTTTGTGTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	11025198	11093335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.2320.9	chr10	+	5858	30	NNC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	9	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3425480897158	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTTTTAGTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	11025225	11089969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11025331_11027356_11028022_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ES.23200.1	chr4	-	179	1	Intergenic	novelGene_19051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTTTATC	NA	False	NA	NA	False	NA	NA	NA	41177386	41177207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41177200_41177400
ES.23201.1	chr4	+	3328	28	Intergenic	novelGene_19052	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAAGCGGCGGCGGCGG	4210	False	NA	NA	False	NA	NA	NA	41195412	41275104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41195528_41195609_41195672_41195744_41195852_41195941_41196042_41196325_41196532_41196727_41196808_41199216_41199266_41199493_41199585_41199714_41199903_41201463_41201534_41202273_41202460_41203533_41203573_41205523_41205740_41206154_41206330_41206837_41207105_41209352_41209570_41211704_41211895_41216565_41216636_41218312_41218362_41221553_41221622_41223355_41223459_41226278_41226334_41227197_41227277_41229694_41229849_41233603_41233718_41235518_41235590_41251529_41251672_41275039
ES.23201.2	chr4	+	178	1	Intergenic	novelGene_19053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	41235906	41236084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41235900_41236100
ES.23201.3	chr4	+	1864	1	Intergenic	novelGene_19054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGCCTAAGATCAAGA	NA	False	NA	NA	False	NA	NA	NA	41247532	41249396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41247500_41249400
ES.23201.4	chr4	+	174	1	Intergenic	novelGene_19056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAATTAATTAATCC	NA	False	NA	NA	False	NA	NA	NA	41265462	41265636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41265500_41265600
ES.23201.5	chr4	+	160	1	Intergenic	novelGene_19057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGCGAGCAGAGAA	NA	False	NA	NA	False	NA	NA	NA	41271322	41271482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41271300_41271500
ES.23202.1	chr4	-	5428	9	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-2807	1	intron_retention	FALSE	canonical	3	850	junction_7	46.4029565329624	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTCCGTGTTCTGGCT	8995	False	NA	-2	True	AATAAA	-16	NA	41202884	41194311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41199266_41199493_41199903_41201463_41201534_41202273
ES.23202.10	chr4	-	4391	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_29	274.753977076118	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	3	True	NA	-3	True	AATAAA	-15	NA	41275101	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41275039
ES.23202.101	chr4	-	4874	28	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	14	0	intron_retention	FALSE	canonical	2	13	junction_26	245.896433974604	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	2	True	NA	-6	True	AATAAA	-12	NA	41275102	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41275039
ES.23202.102	chr4	-	4046	28	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	241.723492680336	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	12	True	NA	-6	True	AATAAA	-12	NA	41275092	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.104	chr4	-	4282	30	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	292.149709964095	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41216814_41216905_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.106	chr4	-	4613	31	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	287.857688604784	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	1	True	NA	-6	True	AATAAA	-12	NA	41275130	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41252218_41252311_41253522_41253681_41275039
ES.23202.107	chr4	-	1152	4	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	425.875046880603	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195367_41251543_41251672_41275039
ES.23202.108	chr4	-	4328	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	190.88786910495	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199580_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.109	chr4	-	6369	28	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	intron_retention	FALSE	non_canonical	0	0	junction_13	193.885418625423	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41205744_41206074_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.11	chr4	-	3907	24	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	250.820988439895	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	-3	True	NA	-3	True	AATAAA	-15	NA	41275107	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218368_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.111	chr4	-	2002	13	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	279.922261033706	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	274	False	NA	-6	True	AATAAA	-12	NA	41275079	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195184_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.112	chr4	-	4234	29	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	243.003002416994	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41275039
ES.23202.113	chr4	-	4456	29	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	intron_retention	FALSE	canonical	2	13	junction_27	241.684331983955	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41275039
ES.23202.114	chr4	-	4583	31	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	287.381799856722	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	232	False	NA	-6	True	AATAAA	-12	NA	41275121	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41271303_41271461_41275039
ES.23202.115	chr4	-	4097	27	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	193.66108763483	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	231	False	NA	-6	True	AATAAA	-12	NA	41275122	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.116	chr4	-	4448	30	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	247.14346158946	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	210	False	NA	-6	True	AATAAA	-12	NA	41275143	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41216832_41216905_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.119	chr4	-	4300	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	190.847074558	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205705_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.12	chr4	-	4083	27	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_8	291.491423544502	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	-3	True	NA	-3	True	AATAAA	-15	NA	41275107	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.121	chr4	-	4323	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	249.737727221898	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGGTCTCCGTGTTC	5	True	NA	-7	True	AATAAA	-11	NA	41275099	41194316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221609_41223351_41223460_41226279_41226336_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.122	chr4	-	6952	27	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-210	-1	intron_retention	FALSE	canonical	3	748	junction_15	85.1933408515231	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGGTCTCCGTGTTC	-1	True	NA	-7	True	AATAAA	-11	NA	41275354	41194316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.124	chr4	-	4729	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	-1	intron_retention	FALSE	canonical	3	182	junction_12	161.897705175259	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGGTCTCCGTGTTC	4	True	NA	-7	True	AATAAA	-11	NA	41275100	41194316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.125	chr4	-	4393	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_28	229.960433597626	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGGTCTCCGTGTTC	5	True	NA	-7	True	AATAAA	-11	NA	41275099	41194316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41274959
ES.23202.126	chr4	-	4006	26	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	200.639194575736	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGGTCTCCGTGTTC	3	True	NA	-7	True	AATAAA	-11	NA	41275101	41194316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.129	chr4	-	2835	19	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.709723533107	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	5	True	NA	-8	True	AATAAA	-10	NA	41275099	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195024_41202398_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.13	chr4	-	4820	27	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	0	intron_retention	FALSE	canonical	2	30	junction_15	190.744539345012	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	3	True	NA	-3	True	AATAAA	-15	NA	41275101	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.134	chr4	-	4381	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	188.823326748815	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	197	False	NA	-8	True	AATAAA	-10	NA	41275156	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216571_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.135	chr4	-	4338	27	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-2	intron_retention	FALSE	canonical	1	4	junction_5	196.384227454496	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	5	True	NA	-8	True	AATAAA	-10	NA	41275099	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.136	chr4	-	4101	26	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	302.705147627192	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	5	True	NA	-8	True	AATAAA	-10	NA	41275099	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218368_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268275_41268346_41275039
ES.23202.137	chr4	-	4601	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	190.546645823782	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	5	True	NA	-8	True	AATAAA	-10	NA	41275099	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216905_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.138	chr4	-	4336	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_17	183.859095754974	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	229	False	NA	-8	True	AATAAA	-10	NA	41275124	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.139	chr4	-	4302	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	190.881734942592	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	3	True	NA	-8	True	AATAAA	-10	NA	41275101	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195496_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.14	chr4	-	4095	26	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	293.890183572027	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	232	False	NA	-3	True	AATAAA	-15	NA	41275121	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218368_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41275039
ES.23202.141	chr4	-	4254	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	189.711982985631	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	3	True	NA	-8	True	AATAAA	-10	NA	41275101	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41251534_41251672_41275039
ES.23202.142	chr4	-	4420	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	297.752285414214	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	212	False	NA	-8	True	AATAAA	-10	NA	41275141	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41272126_41272254_41275039
ES.23202.143	chr4	-	4056	27	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	235.603897984652	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTCTTGGTCTCCGTGTT	3	True	NA	-8	True	AATAAA	-10	NA	41275101	41194317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.149	chr4	-	3960	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	33	375	14	-375	multi-exon	FALSE	canonical	3	748	junction_17	84.4073804080362	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCATGGTCCCTCT	2	True	NA	NA	False	NA	NA	NA	41275102	41194690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.15	chr4	-	6261	16	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-3043	0	intron_retention	FALSE	canonical	1	4	junction_6	232.669207244964	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	NA	False	NA	-3	True	AATAAA	-15	NA	41216871	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41209570_41211704_41211895_41216565
ES.23202.150	chr4	-	4590	12	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-5516	-387	intron_retention	FALSE	canonical	3	756	junction_10	60.9206230602543	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTTCTGTCATTTGT	6286	False	NA	NA	False	NA	NA	NA	41205593	41194702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523
ES.23202.151	chr4	-	3957	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-2	-387	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_12	158.993144987642	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTTCTGTCATTTGT	224	False	NA	NA	False	NA	NA	NA	41275129	41194702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.154	chr4	-	5377	1	FSM	ENSMUSG00000089265.2	ENSMUST00000158640.2	77	1	-4013	-1287	-4013	1287	mono-exon	FALSE	NA	NA	NA	NA	NA	1100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATAATTTATTGAAGCCA	4733	False	NA	NA	False	NA	NA	NA	41207146	41201769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41201800_41207100
ES.23202.155	chr4	-	2522	15	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1448	intron_retention	FALSE	canonical	3	748	junction_3	82.2319082515654	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTAGTATATTTATTG	5	True	NA	NA	False	AATACA	-20	NA	41275099	41205446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.156	chr4	-	831	1	FSM	ENSMUSG00000089308.2	ENSMUST00000158683.2	81	1	-756	6	-756	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1028	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCTGAGATAAAAACTTC	NA	False	NA	NA	False	NA	NA	NA	41212338	41211507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41211500_41212300
ES.23202.157	chr4	-	1196	9	ISM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	36	26887	17	386	5prime_fragment	FALSE	canonical	3	900	junction_1	58.3282735900867	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAAAGTTGTGTGGCT	5	True	NA	NA	False	AATAAA	-16	NA	41275099	41221202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.158	chr4	-	4207	3	NIC	ENSMUSG00000028433.15	novel	735	9	NA	NA	14	-19894	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	456.5	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	41275102	41241485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41245493_41251534_41251672_41275039
ES.23202.159	chr4	-	1693	1	Intergenic	novelGene_19055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	923	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	41259128	41257435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41257400_41259100
ES.23202.16	chr4	-	4182	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_27	218.997610399676	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	3	True	NA	-3	True	AATAAA	-15	NA	41275101	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.17	chr4	-	4411	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	9	-1	intron_retention	FALSE	canonical	3	182	junction_11	161.850444946847	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	-3	True	NA	-4	True	AATAAA	-14	NA	41275107	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.18	chr4	-	4575	30	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-159	-1	combination_of_known_junctions	FALSE	canonical	2	13	junction_28	237.510057362619	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	-1	True	NA	-4	True	AATAAA	-14	NA	41275303	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41275039
ES.23202.19	chr4	-	4420	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_28	189.937341977693	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	1	True	NA	-4	True	AATAAA	-14	NA	41275130	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41274984
ES.23202.20	chr4	-	4465	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	1	-1	intron_retention	FALSE	canonical	3	748	junction_16	85.5414771164856	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	210	False	NA	-4	True	AATAAA	-14	NA	41275143	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.22	chr4	-	4269	27	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	-1	intron_retention	FALSE	canonical	1	1	junction_23	195.452248288288	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	3	True	NA	-4	True	AATAAA	-14	NA	41275101	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.23	chr4	-	4216	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	190.547165348168	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	4	True	NA	-4	True	AATAAA	-14	NA	41275100	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223443_41227245_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.24	chr4	-	4308	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	190.785861368077	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTCTCCGTGTTCTGG	265	False	NA	-4	True	AATAAA	-14	NA	41275088	41194313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199251_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.26	chr4	-	6889	26	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	intron_retention	FALSE	canonical	3	112	junction_25	181.009674879549	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41202458_41203532_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.27	chr4	-	4839	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	intron_retention	FALSE	canonical	0	0	junction_15	252.265004812521	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41207423_41207515_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.28	chr4	-	4950	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-157	1	intron_retention	FALSE	canonical	3	748	junction_16	85.9337640103247	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	1	True	NA	-5	True	AATAAA	-13	NA	41275301	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.29	chr4	-	4942	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	289.550054817723	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41222615_41223222_41223355_41223460_41226279_41226336_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.3	chr4	-	4561	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_12	158.993144987642	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	10	False	NA	-3	True	AATAAA	-15	NA	41275343	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.32	chr4	-	4283	27	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	intron_retention	FALSE	canonical	3	112	junction_26	178.022404015228	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.33	chr4	-	6796	21	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-12481	1	intron_retention	FALSE	canonical	1	2	junction_19	211.376583376683	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	NA	False	NA	-5	True	AATAAA	-13	NA	41226309	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41222615_41223460_41226279
ES.23202.34	chr4	-	4253	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	190.181555979264	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	192	False	NA	-5	True	AATAAA	-13	NA	41275161	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.35	chr4	-	3981	5	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	1341	1	intron_retention	FALSE	canonical	3	890	junction_4	40.5177430269752	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	8326	False	NA	-5	True	AATAAA	-13	NA	41198736	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196534_41196729
ES.23202.36	chr4	-	4816	12	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-5939	1	intron_retention	FALSE	canonical	3	182	junction_11	210.37644339109	1161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5863	False	NA	-5	True	AATAAA	-13	NA	41206016	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532
ES.23202.38	chr4	-	4203	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	247.356954642889	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	1	True	NA	-5	True	AATAAA	-13	NA	41275130	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.39	chr4	-	6427	27	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	intron_retention	FALSE	canonical	3	748	junction_16	87.3969469224237	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.4	chr4	-	4400	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-157	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_27	174.707288022968	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	1	True	NA	-3	True	AATAAA	-15	NA	41275301	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.40	chr4	-	4418	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_29	245.859694334908	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	-8	True	NA	-5	True	AATAAA	-13	NA	41275112	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41275039
ES.23202.41	chr4	-	4651	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	intron_retention	FALSE	canonical	0	0	junction_28	292.148318007524	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41271303_41271461_41275039
ES.23202.42	chr4	-	4190	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	242.122303550382	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	235	False	NA	-5	True	AATAAA	-13	NA	41275118	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196784_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.43	chr4	-	4674	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-156	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	275.901643713058	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	2	True	NA	-5	True	AATAAA	-13	NA	41275300	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41253522_41253681_41275039
ES.23202.44	chr4	-	4447	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-207	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	187.572818994874	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	2	True	NA	-5	True	AATAAA	-13	NA	41275351	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039_41275067_41275204
ES.23202.45	chr4	-	8402	27	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	1	intron_retention	FALSE	canonical	3	182	junction_12	161.202269207456	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	4	True	NA	-5	True	AATAAA	-13	NA	41275100	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41205738_41206152_41206326_41206832_41207105_41209352_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.46	chr4	-	4398	28	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	1	intron_retention	FALSE	canonical	3	182	junction_11	161.910659712062	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	4	True	NA	-5	True	AATAAA	-13	NA	41275100	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.47	chr4	-	4350	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	229.960433597626	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	274	False	NA	-5	True	AATAAA	-13	NA	41275079	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41274984
ES.23202.48	chr4	-	4321	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.000247872304	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195664_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221619_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.49	chr4	-	4464	31	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_30	314.901289648395	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	232	False	NA	-5	True	AATAAA	-13	NA	41275121	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41268273_41268346_41275039
ES.23202.5	chr4	-	4164	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	38	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	190.88786910495	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	275	False	NA	-3	True	AATAAA	-15	NA	41275078	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201515_41202404_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.51	chr4	-	4145	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	188.84646582428	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.53	chr4	-	4088	25	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	196.907761824329	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	200	False	NA	-5	True	AATAAA	-13	NA	41275153	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218368_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.54	chr4	-	4332	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	188.880033597616	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	4	True	NA	-5	True	AATAAA	-13	NA	41275100	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218353_41221546_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.55	chr4	-	4345	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	190.434345105914	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196317_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.56	chr4	-	4297	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_17	225.625850102983	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	4	True	NA	-5	True	AATAAA	-13	NA	41275100	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.57	chr4	-	4401	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	23	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	247.168738427108	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	11	True	NA	-5	True	AATAAA	-13	NA	41275093	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41238154_41238229_41251534_41251672_41275039
ES.23202.58	chr4	-	4317	29	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.434345105914	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	5	True	NA	-5	True	AATAAA	-13	NA	41275099	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196028_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.59	chr4	-	4513	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	247.171951970012	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	232	False	NA	-5	True	AATAAA	-13	NA	41275121	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41253522_41253681_41275039
ES.23202.6	chr4	-	3420	21	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	209.56890871501	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	-3	True	NA	-3	True	AATAAA	-15	NA	41275107	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207112_41229793_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.60	chr4	-	6608	18	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	-7788	1	intron_retention	FALSE	canonical	3	756	junction_12	74.9817509516719	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	NA	False	NA	-5	True	AATAAA	-13	NA	41221616	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41207105_41209352_41211895_41216565_41216634_41218310_41218364_41221555
ES.23202.61	chr4	-	7017	23	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	17985	1	intron_retention	FALSE	canonical	3	182	junction_12	170.778074782585	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	NA	False	NA	-5	True	AATAAA	-13	NA	41233634	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41207105_41209352_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603
ES.23202.63	chr4	-	4531	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	1	intron_retention	FALSE	canonical	3	748	junction_16	85.7266687116388	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	3	True	NA	-5	True	AATAAA	-13	NA	41275101	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.64	chr4	-	4866	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	2	1	intron_retention	FALSE	canonical	3	748	junction_16	85.9242815934619	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	228	False	NA	-5	True	AATAAA	-13	NA	41275125	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.65	chr4	-	6943	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	412	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	247.530216510252	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTCCGTGTTCTG	649	False	NA	-5	True	AATAAA	-13	NA	41274704	41194314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41252218_41252311_41272126
ES.23202.68	chr4	-	4190	27	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	232.961382888151	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	2	True	NA	-6	True	AATAAA	-12	NA	41275102	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41229688_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.69	chr4	-	4262	28	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	189.751696822948	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	-3	True	NA	-6	True	AATAAA	-12	NA	41275107	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.7	chr4	-	4471	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_28	247.171812460783	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	210	False	NA	-3	True	AATAAA	-15	NA	41275143	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41252218_41252311_41275039
ES.23202.70	chr4	-	3895	25	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	-12481	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	341.48472543927	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	NA	False	NA	-6	True	AATAAA	-12	NA	41226309	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41216832_41216905_41218310_41218364_41221555_41221622_41222615_41222750_41223355_41223460_41226279
ES.23202.71	chr4	-	4149	27	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	232.961382888151	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223426_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.72	chr4	-	4493	32	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	381.137598363867	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41214133_41214205_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41268273_41268346_41275039
ES.23202.74	chr4	-	4281	28	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	191.866301472154	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211910_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.75	chr4	-	4415	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_28	189.937341977693	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	2	True	NA	-6	True	AATAAA	-12	NA	41275102	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41274959
ES.23202.77	chr4	-	4537	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	-210	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	190.436243951103	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	-1	True	NA	-6	True	AATAAA	-12	NA	41275354	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275089
ES.23202.78	chr4	-	4490	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_18	243.58867764646	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41214133_41214205_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.79	chr4	-	7968	26	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_17	200.374146036858	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216905_41218310_41218364_41221555_41221622_41223355_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.80	chr4	-	7511	28	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_18	302.229348136761	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41216832_41216905_41218310_41218364_41221555_41221622_41222615_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.81	chr4	-	4361	28	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	38	0	intron_retention	FALSE	canonical	2	30	junction_16	229.765312363359	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	275	False	NA	-6	True	AATAAA	-12	NA	41275078	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209551_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.83	chr4	-	10940	26	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	intron_retention	FALSE	canonical	3	748	junction_14	82.2448442153063	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41205738_41206152_41206326_41206832_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.84	chr4	-	3884	24	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	325.538413983981	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195740_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218368_41229694_41229849_41233603_41233715_41235516_41235595_41275039
ES.23202.85	chr4	-	4558	27	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	intron_retention	FALSE	canonical	3	9	junction_16	192.395641427338	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.88	chr4	-	4565	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	230.371801859161	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	274	False	NA	-6	True	AATAAA	-12	NA	41275079	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216905_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.9	chr4	-	6685	27	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	15	0	intron_retention	FALSE	canonical	3	182	junction_12	164.202339459655	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	3	True	NA	-3	True	AATAAA	-15	NA	41275101	41194312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.90	chr4	-	6786	26	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	intron_retention	FALSE	canonical	3	748	junction_14	86.3430367777275	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.91	chr4	-	4171	28	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_24	191.799907167795	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	12	True	NA	-6	True	AATAAA	-12	NA	41275092	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.92	chr4	-	4879	27	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	intron_retention	FALSE	canonical	3	748	junction_15	87.2158785282567	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.93	chr4	-	4316	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.842760364845	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195655_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.94	chr4	-	4299	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	190.88786910495	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	277	False	NA	-6	True	AATAAA	-12	NA	41275076	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201524_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.95	chr4	-	4251	30	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	292.727288035337	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	3	True	NA	-6	True	AATAAA	-12	NA	41275101	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205596_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223159_41223219_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.97	chr4	-	4627	29	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	190.427874824575	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	5	True	NA	-6	True	AATAAA	-12	NA	41275099	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203868_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.98	chr4	-	5243	27	NIC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	28	0	intron_retention	FALSE	canonical	3	748	junction_15	87.5400922519464	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	265	False	NA	-6	True	AATAAA	-12	NA	41275088	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ES.23202.99	chr4	-	4352	30	NNC	ENSMUSG00000028433.15	novel	4368	29	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_28	267.336494753097	1172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	4	True	NA	-6	True	AATAAA	-12	NA	41275100	41194315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202440_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41245455_41245493_41251534_41251672_41275039
ES.23203.1	chr4	+	177	1	Intergenic	novelGene_19059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	41309482	41309659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41309500_41309700
ES.23204.1	chr4	+	228	1	Intergenic	novelGene_19060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	41312701	41312929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41312700_41312900
ES.23205.1	chr4	-	1719	11	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	70	12830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.003204522116	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATAATCATAGTCT	17	True	NA	NA	False	NA	NA	NA	41314819	41278469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41278501_41287711_41287739_41293010_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.10	chr4	-	5578	8	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	60	-3	intron_retention	FALSE	canonical	3	440	junction_1	53.4239875802957	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTTTGAGTGACTAT	7	True	NA	-3	True	AATAAA	-15	NA	41314829	41291302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41293215_41293932_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.11	chr4	-	3364	9	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.818417749695	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTTGAGTGACTA	1883	False	NA	-4	True	AATAAA	-14	NA	41314866	41291303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293164_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.13	chr4	-	3327	9	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_5	180.678538778129	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGTTTGAGTGACT	1886	False	NA	-5	True	AATAAA	-13	NA	41314863	41291304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299517_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.14	chr4	-	3148	10	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	50	-104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	175.720808298664	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTCTCCTGTGATGCTT	-3	True	NA	1	True	AGTAAA	-35	NA	41314839	41291403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487_41314557_41314696
ES.23205.16	chr4	-	3152	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	50	240	50	-240	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTTAATTTTTTT	-3	True	NA	NA	False	NA	NA	NA	41314839	41291539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.17	chr4	-	2255	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	4	1183	4	-1183	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCTTTGGGACTAGC	-2	True	NA	2	True	ATTAAA	-30	NA	41314885	41292482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.18	chr4	-	3911	8	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	65	-1199	intron_retention	FALSE	canonical	3	440	junction_1	53.0813776484863	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTACTCAGAGTC	12	True	NA	-14	True	ATTAAA	-14	NA	41314824	41292498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.19	chr4	-	4657	7	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	369	-1204	intron_retention	FALSE	canonical	3	440	junction_1	54.0640052776953	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACAACTTTACTCA	2229	False	NA	-19	True	ATTAAA	-9	NA	41314520	41292503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.2	chr4	-	350	2	Intergenic	novelGene_19058	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTTCCCTGAATACCT	NA	False	NA	NA	False	NA	NA	NA	41282487	41281862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41282178_41282452
ES.23205.20	chr4	-	2010	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	27	1405	27	-1405	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTGAGGTAGGGCCC	1887	False	NA	NA	False	NA	NA	NA	41314862	41292704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.21	chr4	-	1789	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	70	1583	70	-1583	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCAGTTGGTGGCTTGT	17	True	NA	NA	False	NA	NA	NA	41314819	41292882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.22	chr4	-	1722	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	8	1712	8	-1712	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGTTTCCTTGTTTG	2	True	NA	-6	True	NA	NA	NA	41314881	41293011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.23	chr4	-	1555	9	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	62	-1712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	183.860638460221	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGTTTCCTTGTTTG	9	True	NA	-6	True	NA	NA	NA	41314827	41293011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299488_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.24	chr4	-	1980	5	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	14114	1712	14114	-1712	3prime_fragment	FALSE	canonical	3	440	junction_1	65.6786685309622	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCAGTTTCCTTGTTTG	NA	False	NA	-6	True	NA	NA	NA	41300775	41293011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406
ES.23205.25	chr4	-	3439	4	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	70	-7450	intron_retention	FALSE	canonical	3	517	junction_2	22.573337271116	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATGGGTGTCATGCG	17	True	NA	NA	False	NA	NA	NA	41314819	41298749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.26	chr4	-	1517	6	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	-4	-7450	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	217.348936045245	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATGGGTGTCATGCG	1856	False	NA	NA	False	NA	NA	NA	41314893	41298749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41299144_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.27	chr4	-	1716	5	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	60	7450	60	-7450	5prime_fragment	FALSE	canonical	3	517	junction_3	20.1556443707464	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATGGGTGTCATGCG	7	True	NA	NA	False	NA	NA	NA	41314829	41298749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.3	chr4	-	3476	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	-33	-1	-33	1	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGAGTGACTATATAT	1827	False	NA	1	True	AATAAA	-19	NA	41314922	41291298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.4	chr4	-	3395	9	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_4	183.43391180477	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTGAGTGACTATAT	1873	False	NA	-1	True	AATAAA	-17	NA	41314876	41291300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299439_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.5	chr4	-	6178	7	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	50	-2	intron_retention	FALSE	canonical	3	440	junction_1	54.0640052776953	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	-3	True	NA	-2	True	AATAAA	-16	NA	41314839	41291301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.6	chr4	-	3363	9	NNC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	70	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	183.860638460221	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	17	True	NA	-2	True	AATAAA	-16	NA	41314819	41291301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301340_41301395_41302613_41302821_41313210_41313466_41314487
ES.23205.8	chr4	-	5105	8	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	68	-2	intron_retention	FALSE	canonical	3	440	junction_1	53.0813776484863	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTGAGTGACTATA	15	True	NA	-2	True	AATAAA	-16	NA	41314821	41291301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41301395_41302613_41302821_41313210_41313466_41314487
ES.23206.1	chr4	-	265	1	Intergenic	novelGene_19061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41317349	41317084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41317100_41317300
ES.23207.1	chr4	-	175	1	Intergenic	novelGene_19062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	41337266	41337091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41337100_41337300
ES.23208.1	chr4	+	157	1	Intergenic	novelGene_19063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	41341831	41341988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41341800_41342000
ES.23209.1	chr4	-	173	1	Intergenic	novelGene_19064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGAAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	41342848	41342675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41342700_41342800
ES.2321.1	chr10	-	5400	1	Antisense	novelGene_ENSMUSG00000090112.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	2533	False	NA	NA	False	NA	NA	NA	11043057	11037657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_11037700_11043100
ES.23210.1	chr4	-	171	1	Intergenic	novelGene_19065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAACTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	41345597	41345426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41345400_41345600
ES.23211.1	chr4	+	2706	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	-6	756	-6	3	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCTTAACCTCTTT	NA	False	NA	8	True	AATAAA	-17	NA	41348989	41389769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.10	chr4	+	2612	7	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	154.906154386024	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	5	True	NA	4	True	AATAAA	-13	NA	41349051	41389765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387346_41388095_41388182_41388680
ES.23211.11	chr4	+	177	1	Intergenic	novelGene_19068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACATTATCAAAATCCTG	8564	False	NA	NA	False	NA	NA	NA	41367456	41367633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41367500_41367600
ES.23211.12	chr4	+	4052	6	NIC	ENSMUSG00000028437.15	novel	422	4	NA	NA	-1575	-19	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	128.226362344098	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATCTAAAAGGTAT	84	False	NA	-14	True	NA	NA	NA	41369672	41389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41371324_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.13	chr4	+	4971	1	NIC	ENSMUSG00000028437.15	novel	2514	6	NA	NA	13070	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	5245	False	NA	4	True	AATAAA	-13	NA	41384794	41389765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41384800_41389800
ES.23211.2	chr4	+	1990	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	19	1447	19	386	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTTTCAGAAGGAATAC	12	False	NA	35	True	ATTAAA	-35	NA	41349014	41389078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.3	chr4	+	2531	6	NIC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	127.380689274317	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	-11	True	NA	4	True	AATAAA	-13	NA	41349035	41389765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41349232_41366889_41366931_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.4	chr4	+	3140	7	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	115.609495957536	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	-8	True	NA	4	True	AATAAA	-13	NA	41349038	41389765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41349232_41366889_41366931_41371724_41371850_41378459_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.5	chr4	+	1935	4	ISM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	44	9243	-8	1107	5prime_fragment	FALSE	canonical	3	290	junction_2	19.7709101684492	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGATTTTTTTTTT	-7	True	NA	NA	False	ATTAAA	-13	NA	41349039	41380523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946
ES.23211.6	chr4	+	2572	6	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.40571857534	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCCATGCTGCCTTAAC	-5	True	NA	2	True	AATAAA	-11	NA	41349041	41389763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41349232_41371759_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.7	chr4	+	2387	6	FSM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	46	81	-6	-81	multi-exon	FALSE	canonical	2	3	junction_4	125.151108664686	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATACAGTCTTGAATC	-5	True	NA	-76	True	ATTAAA	-17	NA	41349041	41389685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41388095_41388198_41388680
ES.23211.8	chr4	+	2757	8	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	139.874287581852	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	-5	True	NA	5	True	AATAAA	-14	NA	41349041	41389766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41349232_41366889_41366931_41371724_41371850_41378459_41378566_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23211.9	chr4	+	2825	8	NNC	ENSMUSG00000028437.15	novel	3456	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.644126898991	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	-1	True	NA	4	True	AATAAA	-13	NA	41349045	41389765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41349232_41354857_41355037_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ES.23212.1	chr4	-	172	1	Intergenic	novelGene_19066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATGTGTGTATATA	NA	False	NA	NA	False	NA	NA	NA	41364590	41364418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41364400_41364600
ES.23213.1	chr4	-	230	1	Intergenic	novelGene_19067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTCTACTAATTAACCA	NA	False	NA	NA	False	NA	NA	NA	41365535	41365305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41365300_41365500
ES.23214.1	chr4	-	321	1	Intergenic	novelGene_19069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	41368013	41367692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41367700_41368000
ES.23215.1	chr4	-	787	1	Intergenic	novelGene_19070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41370374	41369587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41369600_41370400
ES.23216.1	chr4	-	1581	1	Antisense	novelGene_ENSMUSG00000028437.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCAGTCTATACTTTG	NA	False	NA	NA	False	AAAAAG	-20	NA	41379478	41377897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_41377900_41379500
ES.23217.1	chr4	-	2874	1	Intergenic	novelGene_19071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCATGAGCCTCTGG	NA	False	NA	NA	False	AAAACA	-11	NA	41383683	41380809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41380800_41383700
ES.23217.10	chr4	-	3520	9	NNC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	11	1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6939360247965	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAGACTGGTTTCTAT	-22	True	NA	NA	False	AATACA	-7	NA	41464876	41389639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41392253_41392877_41392972_41393437_41393586_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41464709
ES.23217.11	chr4	-	7467	13	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	0	1098	intron_retention	FALSE	canonical	3	20	junction_11	9.30352382463524	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACCAAAGAGACTGG	8	True	NA	NA	False	NA	NA	NA	41464846	41389646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.12	chr4	-	6546	13	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	1	978	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	12.8409068561721	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTAGATTTTTATTA	-32	True	NA	NA	False	AATAAA	-21	NA	41464886	41389766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.13	chr4	-	6617	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-55	-969	-8	969	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGCATACCTTTTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	41464895	41389775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23217.15	chr4	-	4698	9	NNC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-4267	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	13	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGCTTTCTACGCA	8576	False	NA	NA	False	NA	NA	NA	41414045	41390739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409970_41413828
ES.23217.16	chr4	-	5646	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-55	2	-8	-2	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCTACTCCAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	41464895	41390746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23217.17	chr4	-	5793	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	9.0651814539423	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCAGCTACTCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	41464899	41390748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.18	chr4	-	3432	12	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	11	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.5295367447324	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACCAGCTACTCCAGG	-22	True	NA	NA	False	NA	NA	NA	41464876	41390750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.19	chr4	-	4904	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-18	6	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	9.0651814539423	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGGTTTGGTTGTTT	-12	True	NA	NA	False	TATAAA	-17	NA	41464866	41391604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.2	chr4	-	6709	4	Antisense	novelGene_ENSMUSG00000028437.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAGAAACCCC	NA	False	NA	NA	False	NA	NA	NA	41390148	41381961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_41385022_41385278_41387356_41388093_41388196_41388678
ES.23217.20	chr4	-	3611	9	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	13	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGGTTTGGTTG	-3	True	NA	NA	False	TATAAA	-14	NA	41464857	41391607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41464709
ES.23217.21	chr4	-	4789	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-59	863	-12	3	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGGTTTGGTTG	NA	False	NA	NA	False	TATAAA	-14	NA	41464899	41391607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23217.22	chr4	-	4888	15	NNC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	12.9709251003613	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGGTTTGGTT	NA	False	NA	NA	False	TATAAA	-13	NA	41464897	41391608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423496_41423538_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.23	chr4	-	3569	2	NIC	ENSMUSG00000028438.17	novel	4333	10	NA	NA	9142	1	intron_retention	FALSE	canonical	3	34	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTGGTTTGGT	NA	False	NA	NA	False	TATAAA	-12	NA	41395644	41391609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392972_41393437
ES.23217.24	chr4	-	1399	4	NIC	ENSMUSG00000028438.17	novel	1756	7	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.4384373412506	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTAGCTTGGATACAT	-22	True	NA	NA	False	NA	NA	NA	41464876	41413548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41414045_41414901_41415000_41428344_41428983_41464709
ES.23217.25	chr4	-	3594	2	ISM	ENSMUSG00000028438.17	ENSMUST00000030148.6	4333	10	22	33895	14	3028	5prime_fragment	FALSE	canonical	3	24	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGCTATTAAATTTTT	28	True	NA	NA	False	ATTAAA	-18	NA	41464826	41425505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41428983_41464709
ES.23217.26	chr4	-	1912	2	FSM	ENSMUSG00000028438.17	ENSMUST00000131532.2	1151	2	43	-804	2	804	multi-exon	FALSE	canonical	3	4	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTGCCCTGGTGTGCA	10	True	NA	NA	False	AATAAA	-15	NA	41464844	41453585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41455363_41464709
ES.23217.27	chr4	-	1065	2	FSM	ENSMUSG00000028438.17	ENSMUST00000131532.2	1151	2	22	64	-17	-64	multi-exon	FALSE	canonical	3	4	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAATATAATTATTTC	-11	True	NA	NA	False	TATAAA	-11	NA	41464865	41454453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41455363_41464709
ES.23217.28	chr4	-	1319	2	NNC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	1	-4397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATCTATGAGTTGATT	9	True	NA	NA	False	NA	NA	NA	41464845	41458786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41459970_41464709
ES.23217.3	chr4	-	3071	1	Intergenic	novelGene_19072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCGTGGGCATGA	NA	False	NA	NA	False	NA	NA	NA	41385253	41382182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41382200_41385300
ES.23217.4	chr4	-	1568	1	Intergenic	novelGene_19073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	41384587	41383019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41383000_41384600
ES.23217.5	chr4	-	6908	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	1	1124	combination_of_known_junctions	TRUE	canonical	3	20	junction_12	9.0651814539423	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGGTGTTATTCATTG	-32	True	NA	NA	False	AATACA	-26	NA	41464886	41389620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.6	chr4	-	6766	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	-55	-1118	-8	1118	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGCCTAGGTGTTAT	NA	False	NA	NA	False	AATACA	-20	NA	41464895	41389626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23217.7	chr4	-	6785	13	NNC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-9	1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.5551855596135	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTTTCTATGCCTAGG	-3	True	NA	NA	False	AATACA	-14	NA	41464857	41389632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397720_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23217.8	chr4	-	6533	12	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	2	1111	combination_of_known_splicesites	TRUE	canonical	0	0	junction_8	13.3063087007505	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTTTCTATGCCTAG	16	True	NA	NA	False	AATACA	-13	NA	41464838	41389633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41423451_41423636_41428344_41428983_41429266_41429412_41464709
ES.23217.9	chr4	-	7386	12	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	-10	1111	intron_retention	FALSE	canonical	3	24	junction_11	8.65309384312058	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTTTCTATGCCTAG	NA	False	NA	NA	False	AATACA	-13	NA	41464897	41389633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ES.23218.1	chr4	+	915	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	-72	2	-72	-2	multi-exon	FALSE	canonical	3	137	junction_1	26.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGATGCTTTCTTGG	NA	False	NA	30	True	AATAAA	-26	NA	41465078	41480924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41465181_41477513_41477648_41480245
ES.23218.3	chr4	+	442	2	NNC	ENSMUSG00000028443.7	novel	845	3	NA	NA	-2	-11369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAACTGGTGGTGATTT	2	True	NA	NA	False	ATTAAA	-12	NA	41465148	41469557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41465181_41469147
ES.23218.4	chr4	+	291	1	NIC	ENSMUSG00000028443.7	novel	845	3	NA	NA	17	-15468	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTTACGTTTGGTA	21	False	NA	NA	False	ATTAAA	-16	NA	41465167	41465458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41465200_41465500
ES.23219.1	chr4	+	7050	2	Intergenic	novelGene_19074	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTCTTGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	41482737	41490091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41485822_41486125
ES.23219.2	chr4	+	191	1	Intergenic	novelGene_19075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGCCTTCACAAAC	NA	False	NA	NA	False	NA	NA	NA	41485040	41485231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41485000_41485200
ES.23219.3	chr4	+	4515	1	Intergenic	novelGene_19076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCTTGGGCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	41485579	41490094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_41485600_41490100
ES.2322.1	chr10	+	3227	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-26786	714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	351.66777251011	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGACTTTTTGAGGGG	NA	False	NA	NA	False	AATAAA	-23	NA	11130287	11171976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11130376_11131608_11131679_11165263_11167317_11170960
ES.2322.10	chr10	+	5099	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	433	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7566	False	NA	NA	False	AATAAA	-25	NA	11157047	11173796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170947
ES.2322.12	chr10	+	5017	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	389.182333731747	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTGTTTTGTTTTTT	7569	False	NA	NA	False	AATAAA	-27	NA	11157050	11173798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11166500_11166567_11167317_11170960
ES.2322.13	chr10	+	3998	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-14	-1089	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	433	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCTCACCTGTCA	7578	False	NA	8	True	AGTAAA	-11	NA	11157059	11172707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170947
ES.2322.14	chr10	+	4373	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-14	701	-14	-701	multi-exon	FALSE	canonical	3	746	junction_2	70.5	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGGGTCAAAAAAACAAT	7578	False	NA	NA	False	AATAAA	-17	NA	11157059	11173095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.16	chr10	+	3752	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-8	707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	443.5	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAAGGGTTTGACTTTT	7584	False	NA	NA	False	AATAAA	-16	NA	11157065	11171969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170449
ES.2322.17	chr10	+	3665	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	4	1391	4	1143	multi-exon	FALSE	canonical	3	746	junction_2	70.5	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGAAGTAAGTTGTG	7596	False	NA	NA	False	ATTAAA	-21	NA	11157077	11172405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.18	chr10	+	4198	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	386.851392656146	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTAATTTTTGTTTTGT	7596	False	NA	NA	False	AATAAA	-22	NA	11157077	11173793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170960_11171205_11172059
ES.2322.2	chr10	+	180	1	Intergenic	novelGene_1768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCCTCAAAGAAT	2578	False	NA	NA	False	NA	NA	NA	11152059	11152239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11152100_11152200
ES.2322.20	chr10	+	3907	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	11	-1079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	389.182333731747	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGTCATTTAACTTAC	7603	False	NA	18	True	AGTAAA	-21	NA	11157084	11172717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11166526_11166588_11167317_11170960
ES.2322.22	chr10	+	6099	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	17	706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	443.5	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAAGGGTTTGACTTT	7609	False	NA	NA	False	AATAAA	-15	NA	11157090	11171968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11168076
ES.2322.23	chr10	+	4678	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	17	365	17	-365	multi-exon	FALSE	canonical	3	746	junction_2	70.5	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATACATAAAATCTTAAAAA	7609	False	NA	NA	False	AATAAA	-15	NA	11157090	11173431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.25	chr10	+	2406	2	ISM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	38	6260	38	-3726	5prime_fragment	FALSE	canonical	3	887	junction_1	0	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7630	False	NA	NA	False	NA	NA	NA	11157111	11167536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11157245_11165263
ES.2322.26	chr10	+	4333	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	39	-701	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	433	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGGGTCAAAAAAACAAT	7631	False	NA	NA	False	AATAAA	-17	NA	11157112	11173095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170947
ES.2322.27	chr10	+	4055	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	389.182333731747	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7631	False	NA	NA	False	AATAAA	-25	NA	11157112	11173796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170960_11171094_11172059
ES.2322.28	chr10	+	3123	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	373	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7634	False	NA	NA	False	AATAAA	-25	NA	11157115	11173796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11167158_11167317_11170960
ES.2322.29	chr10	+	2807	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	43	2210	43	324	multi-exon	FALSE	canonical	3	746	junction_2	70.5	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCATAAGATTATAATC	7635	False	NA	NA	False	AATACA	-15	NA	11157116	11171586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.3	chr10	+	1842	1	Antisense	novelGene_ENSMUSG00000097007.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4783	False	NA	NA	False	NA	NA	NA	11154264	11156106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_11154300_11156100
ES.2322.31	chr10	+	2930	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	44	707	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	389.182333731747	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAAGGGTTTGACTTTT	7636	False	NA	NA	False	AATAAA	-16	NA	11157117	11171969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11165292_11165550_11167317_11170960
ES.2322.32	chr10	+	3728	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	44	1288	44	1246	multi-exon	FALSE	canonical	3	746	junction_2	70.5	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTCTTTCTCCGTTGT	7636	False	NA	NA	False	NA	NA	NA	11157117	11172508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.33	chr10	+	1417	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	44	706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	389.182333731747	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAAGGGTTTGACTTT	7636	False	NA	NA	False	AATAAA	-15	NA	11157117	11171968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11165388_11167158_11167317_11170960
ES.2322.35	chr10	+	2964	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	44	2052	44	482	multi-exon	FALSE	canonical	3	746	junction_2	70.5	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATATGCAGGTCTTTT	7636	False	NA	NA	False	NA	NA	NA	11157117	11171744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.36	chr10	+	5051	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	45	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	418.135809941645	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCTAATTTTTGTT	7637	False	NA	NA	False	AATAAA	-18	NA	11157118	11173789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11167852_11167896_11170960
ES.2322.37	chr10	+	4802	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	389.182333731747	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTGTTTTGTTTTTT	7637	False	NA	NA	False	AATAAA	-27	NA	11157118	11173798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11166419_11166633_11167317_11170960
ES.2322.38	chr10	+	3200	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	45	706	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	433	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAAAGGGTTTGACTTT	7637	False	NA	NA	False	AATAAA	-15	NA	11157118	11171968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11167317_11170947
ES.2322.39	chr10	+	3148	4	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	387.317555616691	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7637	False	NA	NA	False	AATAAA	-25	NA	11157118	11173796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165263_11165292_11167158_11167317_11170960
ES.2322.4	chr10	+	5634	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-568	-6	-568	6	multi-exon	FALSE	canonical	3	746	junction_2	70.5	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTTTTT	7024	False	NA	NA	False	AATAAA	-31	NA	11156505	11173802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.40	chr10	+	3509	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	46	1505	46	1029	multi-exon	FALSE	canonical	3	746	junction_2	70.5	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAATTGTCTCTTTTTT	7638	False	NA	NA	False	NA	NA	NA	11157119	11172291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.44	chr10	+	6818	2	ISM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	57	1829	57	705	intron_retention	FALSE	canonical	3	887	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAAAGGGTTTGACTT	7649	False	NA	NA	False	AATAAA	-14	NA	11157130	11171967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11157245_11165263
ES.2322.46	chr10	+	3284	3	FSM	ENSMUSG00000047648.14	ENSMUST00000070300.5	2492	3	-83	-709	-83	709	multi-exon	FALSE	canonical	0	0	junction_1	373	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGTTTGACTTTTTG	7766	False	NA	NA	False	AATAAA	-18	NA	11157247	11171971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157468_11165263_11167317_11170960
ES.2322.47	chr10	+	4011	3	FSM	ENSMUSG00000047648.14	ENSMUST00000070300.5	2492	3	-74	-1445	-74	-1089	multi-exon	FALSE	canonical	0	0	junction_1	373	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCTCACCTGTCA	7775	False	NA	8	True	AGTAAA	-11	NA	11157256	11172707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157468_11165263_11167317_11170960
ES.2322.48	chr10	+	4281	3	FSM	ENSMUSG00000047648.14	ENSMUST00000070300.5	2492	3	40	-1829	40	-705	multi-exon	FALSE	canonical	0	0	junction_1	373	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTTGGGTCAAAAAAA	7889	False	NA	NA	False	AATAAA	-13	NA	11157370	11173091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157468_11165263_11167317_11170960
ES.2322.49	chr10	+	3330	3	NNC	ENSMUSG00000047648.14	novel	2492	3	NA	NA	42	714	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	372	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGACTTTTTGAGGGG	7891	False	NA	NA	False	AATAAA	-23	NA	11157372	11171976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157634_11165263_11167317_11170960
ES.2322.5	chr10	+	4555	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-554	1059	-554	-1059	multi-exon	FALSE	canonical	3	746	junction_2	70.5	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTCGTCATTTCAGTG	7038	False	NA	38	True	AGTAAA	-41	NA	11156519	11172737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.50	chr10	+	5149	3	NNC	ENSMUSG00000047648.14	novel	2492	3	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	372	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7892	False	NA	NA	False	AATAAA	-25	NA	11157373	11173796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157634_11165263_11167317_11170960
ES.2322.51	chr10	+	4095	3	NNC	ENSMUSG00000047648.14	novel	2492	3	NA	NA	79	-1018	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	372	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTGAATTGCATTTAA	7928	False	NA	79	True	NA	NA	NA	11157409	11172778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157634_11165263_11167317_11170960
ES.2322.52	chr10	+	4353	3	NNC	ENSMUSG00000047648.14	novel	2492	3	NA	NA	91	-748	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	372	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTACTTTTTATTCT	7940	False	NA	NA	False	AATGAA	-3	NA	11157421	11173048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157634_11165263_11167317_11170960
ES.2322.53	chr10	+	3061	2	ISM	ENSMUSG00000047648.14	ENSMUST00000070300.5	2492	3	7932	-705	7932	705	3prime_fragment	FALSE	canonical	3	746	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAAAGGGTTTGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	11165262	11171967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_11167317_11170960
ES.2322.54	chr10	+	5947	1	NIC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	9230	1245	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	716	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCTTTCTCCGTTG	NA	False	NA	NA	False	NA	NA	NA	11166560	11172507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_11166600_11172500
ES.2322.6	chr10	+	2626	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-82	2516	-82	18	multi-exon	FALSE	canonical	3	746	junction_2	70.5	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACTGTTTTGCAGTGA	7510	False	NA	NA	False	ATTAAA	-33	NA	11156991	11171280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.7	chr10	+	3280	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-40	1820	-40	714	multi-exon	FALSE	canonical	3	746	junction_2	70.5	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGACTTTTTGAGGGG	7552	False	NA	NA	False	AATAAA	-23	NA	11157033	11171976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.2322.8	chr10	+	4391	3	NNC	ENSMUSG00000047648.14	novel	5060	3	NA	NA	-38	-701	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	373	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGGGTCAAAAAAACAAT	7554	False	NA	NA	False	AATAAA	-17	NA	11157035	11173095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_11157245_11165269_11167317_11170960
ES.2322.9	chr10	+	3158	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	-33	1935	-33	599	multi-exon	FALSE	canonical	3	746	junction_2	70.5	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATGGTATTTCATATT	7559	False	NA	NA	False	ATTAAA	-38	NA	11157040	11171861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11157245_11165263_11167317_11170960
ES.23220.1	chr4	-	6347	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-12	-2162	-12	2162	multi-exon	FALSE	canonical	3	158	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTCATTGTTTTCAA	-4	True	NA	NA	False	AATAAA	-15	NA	41503088	41493441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41499691_41502990
ES.23220.2	chr4	-	5513	2	NNC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	9	1169	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGTTTTGGAGTCAG	17	True	NA	NA	False	ATTAAA	-20	NA	41503067	41494434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41499871_41502990
ES.23220.3	chr4	-	3985	3	NNC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	-59	1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTTTTGGAGTCA	5831	False	NA	NA	False	ATTAAA	-19	NA	41503135	41494435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41495157_41496571_41499691_41502990
ES.23220.4	chr4	-	4383	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	-207	-3	-207	3	multi-exon	FALSE	canonical	3	158	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTTCTTGCTTAA	5683	False	NA	1	True	NA	NA	NA	41503283	41495600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41499691_41502990
ES.23220.5	chr4	-	4262	3	NNC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTGTTTTCTTGCTTA	-12	True	NA	0	True	NA	NA	NA	41503096	41495601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41499693_41502140_41502206_41502990
ES.23220.7	chr4	-	2839	3	NNC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	-137	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	77	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTATTTGTTGTTTTCTTG	5753	False	NA	-4	True	NA	NA	NA	41503213	41495605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41495850_41497318_41499691_41502990
ES.23221.1	chr4	-	3374	6	NIC	ENSMUSG00000028439.15	novel	3357	6	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_3	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCGGCTCCTTACCTGG	107	False	NA	NA	False	ATTAAA	-16	NA	41569558	41517691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41520396_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
ES.23221.2	chr4	-	2103	6	FSM	ENSMUSG00000028439.15	ENSMUST00000108052.10	3357	6	5	1249	5	-1249	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCTTTTCATACCAGAA	-6	True	NA	NA	False	NA	NA	NA	41569532	41518939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41520399_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
ES.23221.3	chr4	-	4523	5	NIC	ENSMUSG00000028439.15	novel	3357	6	NA	NA	-24	-1255	intron_retention	FALSE	canonical	0	0	junction_3	1.6393596310755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGACAGAGTCTTTTCATA	103	False	NA	NA	False	NA	NA	NA	41569562	41518945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41520399_41520911_41520967_41521611_41521693_41521866_41524415_41569176
ES.23222.1	chr4	-	1236	2	FSM	ENSMUSG00000028445.8	ENSMUST00000127306.2	1269	2	-36	69	-36	-69	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAGATTTCTTTTTTTA	-2	True	NA	-70	True	AATAAA	-16	NA	41640360	41638212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41639002_41639913
ES.23223.1	chr4	-	2048	10	FSM	ENSMUSG00000028444.18	ENSMUST00000102961.10	1995	10	-54	1	-51	-1	multi-exon	FALSE	canonical	1	1	junction_6	2.00616334280753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGAGCTGAACCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	41695496	41657498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41658153_41658240_41658410_41658780_41658962_41661972_41662137_41663201_41663369_41663539_41663658_41670842_41671077_41675019_41675105_41686796_41686887_41695310
ES.23224.1	chr4	-	3222	7	Fusion	ENSMUSG00000036114.4_ENSMUSG00000028447.12	novel	973	7	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_6	391.405480288664	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	-8	True	NA	-17	True	AATAAA	-14	NA	41723162	41712032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_41712815_41713460_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723032
ES.23224.2	chr4	-	1479	1	NIC	ENSMUSG00000036114.4	novel	856	2	NA	NA	23	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	-2	True	NA	-17	True	AATAAA	-14	NA	41713511	41712032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41712000_41713500
ES.23224.3	chr4	-	837	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	-11	147	-11	-147	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGCCTGCTGATG	8062	False	NA	NA	False	AATAAA	-20	NA	41723181	41714944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ES.23224.4	chr4	-	3818	5	ISM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	32	149	-1	-149	intron_retention	FALSE	canonical	3	881	junction_4	34.6220666627514	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	16	True	NA	NA	False	AATAAA	-18	NA	41723138	41714946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836
ES.23224.5	chr4	-	733	6	FSM	ENSMUSG00000028447.12	ENSMUST00000171641.2	885	6	0	152	0	-152	multi-exon	FALSE	canonical	3	44	junction_1	342.598657323697	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGCCTGTTGGCCTGC	-9	True	NA	NA	False	AATAAA	-15	NA	41723163	41714949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41715239_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ES.23224.6	chr4	-	968	8	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	3	-152	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	400.02408090779	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGCCTGTTGGCCTGC	-13	True	NA	NA	False	AATAAA	-15	NA	41723167	41714949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41715260_41715395_41715456_41716395_41716455_41716968_41717119_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ES.23224.7	chr4	-	5067	2	NIC	ENSMUSG00000028447.12	novel	344	3	NA	NA	10	-152	intron_retention	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGCCTGTTGGCCTGC	8116	False	NA	NA	False	AATAAA	-15	NA	41723127	41714949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41719924_41723034
ES.23224.8	chr4	-	511	4	NNC	ENSMUSG00000028447.12	novel	973	7	NA	NA	11	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	439.390486924785	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGCCTGTTGGCCTGC	2	True	NA	NA	False	AATAAA	-15	NA	41723152	41714949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41715260_41715395_41715456_41716395_41716465_41723080
ES.23224.9	chr4	-	1755	6	NIC	ENSMUSG00000028447.12	novel	973	7	NA	NA	-2	-153	intron_retention	FALSE	canonical	3	869	junction_4	24.8563875090489	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGCCTGTTGGCCTG	-11	True	NA	NA	False	AATAAA	-14	NA	41723165	41714950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41715260_41715395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ES.23225.1	chr4	-	1692	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	-34	-18	-34	18	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCAGGGAAGCCAGCT	3713	False	NA	NA	False	AATAAA	-35	NA	41741393	41738474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ES.23225.10	chr4	-	165	1	Intergenic	novelGene_19077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	41754172	41754007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41754000_41754200
ES.23225.2	chr4	-	1604	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	15	junction_3	226.657352749818	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGTTTCCTTATGTGT	4	True	NA	NA	False	AATAAA	-13	NA	41741319	41738496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41739581_41740549_41740643_41740775_41740977_41741093
ES.23225.4	chr4	-	1593	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	247.10906274131	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGTTTCCTTATGTGT	3743	False	NA	NA	False	AATAAA	-13	NA	41741363	41738496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41739581_41740549_41740643_41740822_41740977_41741101
ES.23225.5	chr4	-	1627	4	NIC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	-22	-8	combination_of_known_junctions	FALSE	canonical	2	34	junction_3	217.726127661948	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCGTTTCCTTAT	NA	False	NA	NA	False	AATAAA	-9	NA	41755421	41738500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41739581_41740549_41740643_41740775_41740977_41755168
ES.23225.6	chr4	-	1501	4	NNC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	257.725090401036	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCGTTTCCTTAT	3748	False	NA	NA	False	AATAAA	-9	NA	41741358	41738500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41739451_41740549_41740643_41740775_41740977_41741101
ES.23225.7	chr4	-	1335	4	NNC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	222.508926163024	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCGTTTCCTTAT	3	True	NA	NA	False	AATAAA	-9	NA	41741320	41738500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_41739451_41740549_41740643_41740775_41740977_41741229
ES.23225.9	chr4	-	2680	2	FSM	ENSMUSG00000036078.17	ENSMUST00000142840.2	613	2	-133	-1934	1	-22	multi-exon	FALSE	canonical	3	604	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACATATTAAACAG	4	True	NA	NA	False	NA	NA	NA	41741319	41738514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41740977_41741101
ES.23226.1	chr4	+	2507	4	NIC	ENSMUSG00000036073.19	novel	1007	8	NA	NA	245	-20	intron_retention	FALSE	canonical	3	302	junction_3	14.8996644257513	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAACCATGTTTTCTGA	5	True	NA	12	True	AATAAA	-13	NA	41755497	41758675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.10	chr4	+	1267	11	NNC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-239	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	114.260929455348	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAACCATGTTTTCTGA	-2	True	NA	12	True	AATAAA	-13	NA	41755518	41758675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757714_41757779_41758083_41758239_41758502
ES.23226.11	chr4	+	1845	11	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	540	combination_of_known_junctions	FALSE	canonical	2	43	junction_2	83.1877394812481	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCGGAAGCCCAGAGCC	0	True	NA	NA	False	TTTAAA	-29	NA	41755520	41759235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.12	chr4	+	1296	7	NIC	ENSMUSG00000036073.19	novel	1859	10	NA	NA	-237	-15	intron_retention	FALSE	canonical	0	0	junction_2	119.427337276224	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	0	True	NA	17	True	AATAAA	-18	NA	41755520	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083
ES.23226.13	chr4	+	1157	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	100.017159021667	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	0	True	NA	17	True	AATAAA	-18	NA	41755520	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.14	chr4	+	2445	5	NIC	ENSMUSG00000036073.19	novel	1859	10	NA	NA	-235	-15	intron_retention	FALSE	canonical	3	43	junction_2	118.643373181986	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	2	True	NA	17	True	AATAAA	-18	NA	41755522	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41757593_41757694
ES.23226.17	chr4	+	1472	9	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-171	-11	intron_retention	FALSE	canonical	2	236	junction_4	31.5255352849083	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTCTGACACCAGAGG	11	False	NA	21	True	AATAAA	-22	NA	41755586	41758684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.18	chr4	+	1227	11	NNC	ENSMUSG00000036073.19	novel	900	8	NA	NA	-95	-15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	93.7608127097883	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	64	False	NA	17	True	AATAAA	-18	NA	41755662	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41755735_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.2	chr4	+	1328	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	270	-3	245	3	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGAGTAGTGTGGACTC	5	True	NA	35	True	AATAAA	-36	NA	41755497	41758698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.3	chr4	+	1574	10	FSM	ENSMUSG00000036073.19	ENSMUST00000108038.3	1859	10	270	15	245	-15	multi-exon	FALSE	canonical	2	236	junction_6	33.0177655135258	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	5	True	NA	17	True	AATAAA	-18	NA	41755497	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083
ES.23226.5	chr4	+	2246	5	NIC	ENSMUSG00000036073.19	novel	1859	10	NA	NA	-251	-15	intron_retention	FALSE	canonical	3	43	junction_2	121.633414405746	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	14	False	NA	17	True	AATAAA	-18	NA	41755506	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756343_41757593_41757694_41757779_41758083
ES.23226.6	chr4	+	1437	10	NNC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-251	-15	intron_retention	FALSE	canonical	1	1	junction_7	120.085566201257	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	14	False	NA	17	True	AATAAA	-18	NA	41755506	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757681_41757779_41758083_41758239_41758502
ES.23226.7	chr4	+	1336	11	NNC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-249	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	93.7608127097883	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGACACCAGAGGAGT	16	False	NA	24	True	AATAAA	-25	NA	41755508	41758687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_41755683_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.8	chr4	+	1636	8	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-247	-16	intron_retention	FALSE	canonical	2	43	junction_2	97.4281524917679	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGTTTTCTGACACC	-10	True	NA	16	True	AATAAA	-17	NA	41755510	41758679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756343_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23226.9	chr4	+	1417	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-247	-15	intron_retention	FALSE	canonical	2	236	junction_5	29.8009859808715	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGTTTTCTGACACCA	-10	True	NA	17	True	AATAAA	-18	NA	41755510	41758680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ES.23227.1	chr4	+	6561	10	NIC	ENSMUSG00000073889.11	novel	2009	13	NA	NA	-557	-1	intron_retention	FALSE	canonical	2	6	junction_1	2.58198889747161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCGTCTAATGTTGC	3381	False	NA	3	True	AATAAA	-19	NA	41759638	41769473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ES.23227.2	chr4	+	1724	13	FSM	ENSMUSG00000073889.11	ENSMUST00000098132.11	2009	13	281	4	-21	-4	multi-exon	FALSE	canonical	1	6	junction_1	3.12138680005467	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATTGTCGTCTAATGT	1	True	NA	0	True	AATAAA	-16	NA	41760476	41769470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ES.23227.3	chr4	+	3049	8	NIC	ENSMUSG00000073889.11	novel	2009	13	NA	NA	-19	-2	intron_retention	FALSE	canonical	2	6	junction_1	2.06031501455085	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCGTCTAATGTTG	3	True	NA	2	True	AATAAA	-18	NA	41760478	41769472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41760552_41763581_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ES.23227.4	chr4	+	3467	11	NIC	ENSMUSG00000073889.11	novel	2009	13	NA	NA	-17	0	intron_retention	FALSE	canonical	1	6	junction_1	3.28024389337135	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCGTCTAATGTTGCT	5	True	NA	4	True	AATAAA	-20	NA	41760480	41769474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ES.23227.6	chr4	+	3214	9	NIC	ENSMUSG00000073889.11	novel	2009	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	6	junction_1	3.07205143186113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTGTCGTCTAATGTTG	5	True	NA	2	True	AATAAA	-18	NA	41760510	41769472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41760552_41763581_41763682_41763824_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41768072_41768168_41768576_41769079
ES.23227.7	chr4	+	5247	9	NIC	ENSMUSG00000073889.11	novel	1768	13	NA	NA	668	-1	intron_retention	FALSE	canonical	3	6	junction_1	2.72717802865893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCGTCTAATGTTGC	674	False	NA	3	True	AATAAA	-19	NA	41761179	41769473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768576_41769079
ES.23227.8	chr4	+	3751	10	NIC	ENSMUSG00000073889.11	novel	2009	13	NA	NA	37	-3	intron_retention	FALSE	canonical	2	7	junction_1	2.36225462505214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTGTCGTCTAATGTT	67	False	NA	1	True	AATAAA	-17	NA	41762431	41769471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_41763682_41763824_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ES.23228.1	chr4	-	3034	4	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	80	junction_3	9.20144916122817	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	24	False	NA	5	True	AATAAA	-28	NA	41774146	41769466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41769655_41769843_41769977_41771137_41773804_41774099
ES.23228.10	chr4	-	359	4	FSM	ENSMUSG00000073888.14	ENSMUST00000108032.3	350	4	-9	0	2	0	multi-exon	FALSE	canonical	3	34	junction_1	26.6124448749494	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTGCCTCCCTGACTT	3	True	NA	NA	False	ATTAAA	-14	NA	41774167	41773187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41773351_41773464_41773525_41773735_41773804_41774099
ES.23228.2	chr4	-	2832	5	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	80	junction_4	9.06917857360853	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCCGTCTCTTTTA	10	False	NA	0	True	AATAAA	-23	NA	41774160	41769471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41769655_41769843_41769977_41771137_41773525_41773735_41773804_41774099
ES.23228.3	chr4	-	2852	2	ISM	ENSMUSG00000073888.14	ENSMUST00000131349.8	489	4	446	-424	46	-1	intron_retention	FALSE	canonical	3	100	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCCAAAAACTTCCGTC	679	False	NA	-7	True	AATAAA	-16	NA	41773491	41769478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_41769977_41771137
ES.23228.4	chr4	-	573	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	5	12	5	-1	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCCAAAAACTTCCGTC	33	False	NA	-7	True	AATAAA	-16	NA	41774137	41769478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
ES.23228.6	chr4	-	522	5	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	36.3902459458575	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCCAAAAACTTCCGTC	24	False	NA	-7	True	AATAAA	-16	NA	41774146	41769478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41769655_41769843_41769977_41771137_41771236_41773735_41773804_41774099
ES.23228.9	chr4	-	621	6	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	33.9823483591114	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATCTCCAAAAACTTCC	37	False	NA	-10	True	AATAAA	-13	NA	41774133	41769481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_41769655_41769843_41769977_41771137_41771291_41773464_41773525_41773735_41773804_41774099
ES.23229.1	chr4	-	3231	1	Intergenic	novelGene_19078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAAGGGACCCTCCCC	NA	False	NA	NA	False	NA	NA	NA	41778059	41774828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_41774800_41778100
ES.2323.1	chr10	-	3000	1	Intergenic	novelGene_1769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GACAAACCAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	11161934	11158934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_11158900_11161900
ES.23230.1	chr4	-	174	1	Antisense	novelGene_ENSMUSG00000103694.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATATTTTAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	42038834	42038660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_42038700_42038800
ES.23231.1	chr4	-	150	1	Intergenic	novelGene_19079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	42055934	42055784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42055800_42055900
ES.23232.1	chr4	-	2013	1	Intergenic	novelGene_19080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCACAAACAGCACCT	NA	False	NA	NA	False	NA	NA	NA	42079049	42077036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42077000_42079000
ES.23233.1	chr4	+	187	1	Intergenic	novelGene_19081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTGAATAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	42316803	42316990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_42316800_42317000
ES.23234.1	chr4	+	253	1	Intergenic	novelGene_19082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTTCCAACAA	NA	False	NA	NA	False	NA	NA	NA	42487830	42488083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_42487800_42488100
ES.23235.1	chr4	-	187	1	Antisense	novelGene_ENSMUSG00000102504.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTGAATAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	42719215	42719028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_42719000_42719200
ES.23236.1	chr4	-	177	1	Intergenic	novelGene_19083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42814701	42814524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42814500_42814700
ES.23237.1	chr4	-	174	1	Intergenic	novelGene_19084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATTTTAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	42855338	42855164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42855200_42855300
ES.23238.1	chr4	-	174	1	Intergenic	novelGene_19085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGGAGTGAGGAGGGAC	53	False	NA	NA	False	NA	NA	NA	42874948	42874774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42874800_42874900
ES.23239.1	chr4	-	199	1	Intergenic	novelGene_19086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATATGAGCACACTGTC	NA	False	NA	NA	False	NA	NA	NA	42881837	42881638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42881600_42881800
ES.2324.1	chr10	-	8046	1	Antisense	novelGene_ENSMUSG00000047648.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGCCGGGCGGTGGTG	NA	False	NA	NA	False	AAGAAA	-42	NA	11169994	11161948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_11161900_11170000
ES.2324.2	chr10	-	182	1	Intergenic	novelGene_1770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	11164394	11164212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_11164200_11164400
ES.23240.1	chr4	+	2261	4	NNC	ENSMUSG00000036052.15	novel	3093	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.93310961716756	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATAGCCTCTGCGCA	-26	True	NA	NA	False	AATAAA	-8	NA	42949866	42958723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_42950005_42953140_42953386_42956655_42957128_42957317
ES.23240.2	chr4	+	2813	4	NNC	ENSMUSG00000036052.15	novel	3093	4	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.93310961716756	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAAAAATGAA	-26	True	NA	NA	False	NA	NA	NA	42949866	42959275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_42950005_42953140_42953386_42956655_42957128_42957317
ES.23240.3	chr4	+	1338	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	0	1755	0	-1053	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGAGACTGTTCCT	-26	True	NA	NA	False	NA	NA	NA	42949866	42957670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
ES.23240.4	chr4	+	2389	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	2	702	2	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATAGCCTCTGCGCA	-24	True	NA	NA	False	AATAAA	-8	NA	42949868	42958723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
ES.23240.5	chr4	+	2616	5	NIC	ENSMUSG00000036052.15	novel	3302	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	12.7549010188241	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATAGCCTCTGCGCA	16	True	NA	NA	False	AATAAA	-8	NA	42949908	42958723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_42950005_42950475_42950743_42953140_42953386_42956525_42957128_42957317
ES.23240.6	chr4	+	2401	4	NNC	ENSMUSG00000036052.15	novel	3093	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.9185482500507	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATAGCCTCTGCGCA	26	True	NA	NA	False	AATAAA	-8	NA	42949918	42958723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_42950067_42953140_42953386_42956525_42957128_42957317
ES.23241.1	chr4	-	3475	1	Antisense	novelGene_ENSMUSG00000036052.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGGGAGCCCGCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	42953359	42949884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_42949900_42953400
ES.23242.1	chr4	+	5780	4	NNC	ENSMUSG00000028451.13	novel	1018	3	NA	NA	9362	2266	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAAGATTTTAAGGTA	9348	False	NA	NA	False	NA	NA	NA	42979307	42985906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_42983107_42983363_42984427_42984530_42984692_42985149
ES.23243.1	chr4	+	1981	1	Antisense	novelGene_ENSMUSG00000028452.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCCAGCCAGCCCAGCC	NA	False	NA	NA	False	NA	NA	NA	42999176	43001157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_42999200_43001200
ES.23244.1	chr4	-	2899	18	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-3	14980	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	674.199851265459	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGGCAGGAAGAATAAAA	-1	True	NA	NA	False	NA	NA	NA	43000436	42964982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42964991_42980316_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.12	chr4	-	4860	29	Fusion	ENSMUSG00000028453.11_ENSMUSG00000028452.8	novel	3316	17	NA	NA	-3	-1	multi-exon	FALSE	canonical	2	4	junction_16	1177.23229711793	1223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCGTTCTGGCCACTA	293	False	NA	-16	True	AATAAA	-17	NA	43010225	42979963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ES.23244.13	chr4	-	3255	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	693.27091565996	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCGTTCTGGCCACTA	1	True	NA	-16	True	AATAAA	-17	NA	43000434	42979963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996357_43000161
ES.23244.15	chr4	-	4896	29	Fusion	ENSMUSG00000028453.11_ENSMUSG00000028452.8	novel	3316	17	NA	NA	-47	-1	intron_retention	FALSE	canonical	0	0	junction_24	1181.4120631728	1223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCGTTCTGGCCACTA	-21	True	NA	-16	True	AATAAA	-17	NA	43010269	42979963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007107_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ES.23244.17	chr4	-	5924	15	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	1838	junction_11	299.041913996233	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCGTTCTGGCCACTA	9809	False	NA	-16	True	AATAAA	-17	NA	43000439	42979963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.18	chr4	-	3993	15	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	53	-1	intron_retention	FALSE	canonical	2	1390	junction_10	402.918745290068	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCGTTCTGGCCACTA	9868	False	NA	-16	True	AATAAA	-17	NA	43000380	42979963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42984427_42984530_42984696_42985153_42985267_42985931_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.2	chr4	-	3348	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	-16	-16	-16	16	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCCTCATCTTTTTCTG	9995	False	NA	1	True	AATAAA	-34	NA	43000523	42979946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.20	chr4	-	3233	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	687.637256185083	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGCGTTCTGGCCACT	1	True	NA	-17	True	AATAAA	-16	NA	43000434	42979964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995903_42996069_42996231_42996344_43000161
ES.23244.21	chr4	-	1203	5	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1116.51018804129	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGCGTTCTGGCCACT	0	True	NA	-17	True	AATAAA	-16	NA	43000432	42979964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980492_42993708_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.23	chr4	-	3243	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	686.543490861103	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGCGTTCTGGCCAC	9809	False	NA	-18	True	AATAAA	-15	NA	43000439	42979965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980939_42982522_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.26	chr4	-	3810	15	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-5	-4	intron_retention	FALSE	canonical	2	30	junction_12	720.340169075468	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGCGTTCTGGCCA	9810	False	NA	-19	True	AATAAA	-14	NA	43000438	42979966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986280_42988661_42988765_42990745_42990878_42993148_42993912_42995895_42996069_42996231_42996344_43000161
ES.23244.28	chr4	-	5588	16	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-5	-4	intron_retention	FALSE	canonical	2	1838	junction_11	289.065083021492	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGCGTTCTGGCCA	10006	False	NA	-19	True	AATAAA	-14	NA	43000512	42979966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.29	chr4	-	2424	12	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	762.955529828487	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGAGCCTGCGTTCTG	0	True	NA	-23	True	AATAAA	-10	NA	43000432	42979970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988697_43000211
ES.23244.3	chr4	-	3345	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-5	15	at_least_one_novel_splicesite	TRUE	canonical	2	30	junction_14	681.569761538575	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCCTCATCTTTTTCT	9810	False	NA	0	True	AATAAA	-33	NA	43000438	42979947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993912_42995895_42996069_42996231_42996344_43000161
ES.23244.30	chr4	-	5702	16	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-4	-9	intron_retention	FALSE	non_canonical	0	0	junction_12	678.029583097637	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGCCTGCGTTCT	-2	True	NA	-24	True	AATAAA	-9	NA	43000437	42979971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42992524_42992735_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.31	chr4	-	3005	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	-34	345	-34	-345	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTACCAGCAAGGAATTG	9977	False	NA	6	True	AATAAA	-29	NA	43000541	42980307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.33	chr4	-	5368	16	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-16	-355	intron_retention	FALSE	non_canonical	0	0	junction_12	678.029583097637	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAAGAGTGAATTACCAG	9799	False	NA	-4	True	AATAAA	-19	NA	43000449	42980317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42992524_42992735_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.36	chr4	-	2898	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	-356	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	693.27091565996	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAAGAGTGAATTACCA	0	True	NA	-5	True	AATAAA	-18	NA	43000432	42980318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996357_43000161
ES.23244.4	chr4	-	3092	16	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	690.875213045019	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCCACTATGCCTCA	0	True	NA	-9	True	AATAAA	-24	NA	43000432	42979956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.43	chr4	-	4943	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	658.333333003692	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAAGAGTGAATTACC	0	True	NA	-6	True	AATAAA	-17	NA	43000432	42980319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42992524_42992735_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.44	chr4	-	4881	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	301	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	694.28173034709	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAAGAGTGAATTACC	5771	False	NA	-6	True	AATAAA	-17	NA	43000132	42980319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_42997864
ES.23244.45	chr4	-	2861	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	19	-358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	686.996315492303	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTGAAGAGTGAATTAC	9834	False	NA	-7	True	AATAAA	-16	NA	43000414	42980320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982679_42982836_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.46	chr4	-	2703	16	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	678.029583097637	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTGAAGAGTGAATTAC	0	True	NA	-7	True	AATAAA	-16	NA	43000432	42980320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993734_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.5	chr4	-	3044	16	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	716.125501105311	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	10012	False	NA	-15	True	AATAAA	-18	NA	43000506	42979962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983501_42984602_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.51	chr4	-	5552	15	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	7	-360	intron_retention	FALSE	canonical	2	1838	junction_11	299.041913996233	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGTGAAGAGTGAATT	9822	False	NA	-9	True	AATAAA	-14	NA	43000426	42980322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.52	chr4	-	2862	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-4	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	998.909585185266	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGAGGTGAAGAGTGAAT	-2	True	NA	-10	True	AATAAA	-13	NA	43000437	42980323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980937_42982526_42982687_42982849_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990872_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.53	chr4	-	4521	29	Fusion	ENSMUSG00000028453.11_ENSMUSG00000028452.8	novel	3316	17	NA	NA	-35	-372	intron_retention	FALSE	canonical	2	4	junction_16	1177.23229711793	1223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCATTTGGGAGGT	-9	True	NA	-21	True	AATAAA	-2	NA	43010257	42980334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ES.23244.54	chr4	-	5204	16	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	10	-373	intron_retention	FALSE	canonical	2	1838	junction_11	289.065083021492	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATTTTCATTTGGGAGG	9751	False	NA	-22	True	AATAAA	-1	NA	43000497	42980335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.55	chr4	-	182	1	Intergenic	novelGene_19087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1004	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7742	False	NA	NA	False	NA	NA	NA	42992726	42992544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_42992500_42992700
ES.23244.56	chr4	-	3940	11	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	2	6	intron_retention	FALSE	canonical	3	92	junction_3	12.7137720602503	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTGTGTGTGTG	298	False	NA	0	True	ATTAAA	-22	NA	43010220	43002336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.58	chr4	-	2530	5	ISM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	4151	-4	262	4	intron_retention	FALSE	canonical	3	109	junction_1	13.5092560861063	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATGTGTGTGTGTG	4314	False	NA	-2	True	ATTAAA	-20	NA	43006204	43002338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743
ES.23244.60	chr4	-	2883	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-40	4	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATGTGTGTGTGTG	NA	False	NA	-2	True	ATTAAA	-20	NA	43010546	43002338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.61	chr4	-	2869	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-58	4	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	37.6389941091818	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATGTGTGTGTGTG	NA	False	NA	-2	True	ATTAAA	-20	NA	43010564	43002338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003313_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.62	chr4	-	2867	15	NNC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	38.9337480175474	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATGTGTGTGT	NA	False	NA	-5	True	ATTAAA	-17	NA	43010554	43002341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005009_43005206_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.64	chr4	-	2597	12	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-14	1	intron_retention	FALSE	canonical	0	0	junction_4	36.3588633231123	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATGTGTGTGT	12	True	NA	-5	True	ATTAAA	-17	NA	43010236	43002341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.65	chr4	-	4594	10	NNC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-10	0	intron_retention	FALSE	canonical	2	5	junction_5	39.7212509593766	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	2	True	NA	-6	True	ATTAAA	-16	NA	43010516	43002342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005206_43006614_43006749_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.66	chr4	-	5337	10	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	29	junction_9	31.5692458565392	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	1	True	NA	-7	True	ATTAAA	-15	NA	43010517	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43004606_43004743_43005034_43005210_43006614_43006749_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.67	chr4	-	4299	12	NNC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	48.1689519699598	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	9	True	NA	-7	True	ATTAAA	-15	NA	43010239	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005206_43005278_43006461_43006614_43006749_43006897_43006983_43008295_43008347_43009280_43009706_43009801_43010001
ES.23244.68	chr4	-	2781	14	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-50	-1	intron_retention	FALSE	canonical	1	5	junction_2	46.4142653035534	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	246	False	NA	-7	True	ATTAAA	-15	NA	43010272	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003313_43003782_43003933_43004558_43004606_43004743_43005009_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.69	chr4	-	4007	12	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	92	junction_5	15.3999034020798	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	344	False	NA	-7	True	ATTAAA	-15	NA	43010174	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.7	chr4	-	5538	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	694.28173034709	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	0	True	NA	-15	True	AATAAA	-18	NA	43000432	42979962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_42997864
ES.23244.70	chr4	-	2985	13	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-17	-1	intron_retention	FALSE	canonical	2	2	junction_6	35.6542034299214	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	9	True	NA	-7	True	ATTAAA	-15	NA	43010239	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005375_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.71	chr4	-	2527	15	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	53	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	34.3532073778105	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	216	False	NA	-7	True	ATTAAA	-15	NA	43010302	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010090_43010279
ES.23244.72	chr4	-	3124	14	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-52	-1	intron_retention	FALSE	canonical	3	29	junction_13	27.9494471793833	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	NA	False	NA	-7	True	ATTAAA	-15	NA	43010558	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.73	chr4	-	3801	9	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	92	junction_5	16.0229327839818	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTGTATGTGTGT	234	False	NA	-7	True	ATTAAA	-15	NA	43010284	43002343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43007404_43008710
ES.23244.75	chr4	-	2754	14	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	44.5638960191136	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	9	True	NA	-8	True	ATTAAA	-14	NA	43010239	43002344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005206_43005375_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ES.23244.76	chr4	-	2893	13	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_8	47.2060348072386	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	5	True	NA	-8	True	ATTAAA	-14	NA	43010513	43002344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005375_43006461_43006614_43006749_43006897_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ES.23244.77	chr4	-	2879	13	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-37	-2	intron_retention	FALSE	canonical	2	5	junction_2	44.0309234768273	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	-11	True	NA	-8	True	ATTAAA	-14	NA	43010259	43002344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003313_43003782_43003933_43004558_43004606_43004743_43005034_43005206_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.78	chr4	-	3075	13	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	29	junction_12	30.5844686437777	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTGTATGTGTG	14	True	NA	-8	True	ATTAAA	-14	NA	43010504	43002344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.79	chr4	-	2823	15	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	49.1011554791509	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAAGTTGTATGTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	43010547	43002345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005009_43005210_43005273_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010279
ES.23244.8	chr4	-	3974	16	NIC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	-5	0	intron_retention	FALSE	canonical	2	1390	junction_11	390.142651973466	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	9810	False	NA	-15	True	AATAAA	-18	NA	43000438	42979962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23244.80	chr4	-	3195	13	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_5	35.8378873075223	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAAGTTGTATGTGT	-5	True	NA	-9	True	ATTAAA	-13	NA	43010523	43002345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005059_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.81	chr4	-	4353	8	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	-46	-3	intron_retention	FALSE	canonical	3	92	junction_2	13.7781252242051	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAAGTTGTATGTGT	-20	True	NA	-9	True	ATTAAA	-13	NA	43010268	43002345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43007404_43008710_43009280_43009706_43009801_43010001
ES.23244.82	chr4	-	2851	14	NNC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	-62	-4	intron_retention	FALSE	canonical	0	0	junction_4	47.4017201894939	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTAAGTTGTATGTG	234	False	NA	-10	True	ATTAAA	-12	NA	43010284	43002346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004714_43005009_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001_43010173_43010255
ES.23244.9	chr4	-	5364	17	NNC	ENSMUSG00000028452.8	novel	3316	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	658.333333003692	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	9752	False	NA	-15	True	AATAAA	-18	NA	43000496	42979962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42992524_42992735_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ES.23245.1	chr4	-	164	1	Intergenic	novelGene_19088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATACTTAAAAAAA	9200	False	NA	NA	False	NA	NA	NA	43016612	43016448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43016400_43016600
ES.23246.1	chr4	-	4278	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-9	672	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCTAATGATTTTCTA	-16	True	NA	NA	False	NA	NA	NA	43025828	43016962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.10	chr4	-	4815	10	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	19	-1	intron_retention	FALSE	canonical	1	1	junction_6	67.525760973585	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTAAGATCTGTGAG	12	True	NA	-8	True	AATAAA	-20	NA	43025800	43017635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43022767_43022842_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.11	chr4	-	3615	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTAAGATCTGTGAG	5593	False	NA	-8	True	AATAAA	-20	NA	43025838	43017635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.12	chr4	-	1815	6	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	80.4919871788491	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	12	True	NA	-9	True	AATAAA	-19	NA	43025800	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43020649_43024979_43025075_43025779
ES.23246.13	chr4	-	3490	12	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	55.1928250217752	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	12	True	NA	-9	True	AATAAA	-19	NA	43025800	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43017658_43017743_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.14	chr4	-	3989	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-2	intron_retention	FALSE	canonical	3	84	junction_9	35.2686339855951	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	12	True	NA	-9	True	AATAAA	-19	NA	43025800	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.15	chr4	-	4466	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	11	junction_3	63.2473099998903	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	-3	True	NA	-9	True	AATAAA	-19	NA	43025779	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.17	chr4	-	4071	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-2	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	11	True	NA	-9	True	AATAAA	-19	NA	43025801	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.18	chr4	-	3450	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	20	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	57.8172984495125	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	13	True	NA	-9	True	AATAAA	-19	NA	43025799	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022047_43022583_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.19	chr4	-	4610	9	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	84	junction_8	38.1851983758105	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	-7	True	NA	-9	True	AATAAA	-19	NA	43025819	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.2	chr4	-	4664	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	20	670	intron_retention	FALSE	canonical	3	11	junction_3	55.4637018438386	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGCTAATGATTTTC	13	True	NA	NA	False	NA	NA	NA	43025799	43016964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.20	chr4	-	4149	12	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-23	-2	intron_retention	FALSE	canonical	1	1	junction_7	71.8623569548581	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGCTAAGATCTGTGA	-3	True	NA	-9	True	AATAAA	-19	NA	43025779	43017636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43022842_43022943_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.21	chr4	-	4497	9	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	19	-3	intron_retention	FALSE	canonical	3	131	junction_4	25.6195116073668	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	-10	True	AATAAA	-18	NA	43025800	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ES.23246.22	chr4	-	2765	9	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_4	60.6933892611049	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	-1	True	NA	-10	True	AATAAA	-18	NA	43025813	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ES.23246.25	chr4	-	2245	10	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	75.4438717045843	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	5931	False	NA	-10	True	AATAAA	-18	NA	43025500	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.26	chr4	-	4200	9	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-3	intron_retention	FALSE	canonical	3	84	junction_8	35.0455061313145	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.27	chr4	-	5100	8	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	19	-3	intron_retention	FALSE	canonical	3	131	junction_4	27.3846374331839	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	-10	True	AATAAA	-18	NA	43025800	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43023494_43023671_43023816_43024562
ES.23246.28	chr4	-	3676	12	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	-3	intron_retention	FALSE	canonical	1	1	junction_7	67.1893832620935	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43022842_43022943_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.29	chr4	-	3485	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-3	intron_retention	FALSE	canonical	0	0	junction_9	71.0715132806387	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	-10	True	AATAAA	-18	NA	43025800	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023667_43023722_43024562_43025075_43025779
ES.23246.3	chr4	-	4057	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	670	intron_retention	FALSE	non_canonical	0	0	junction_1	57.8017300779138	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGCTAATGATTTTC	11	True	NA	NA	False	NA	NA	NA	43025801	43016964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43017132_43017736_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.30	chr4	-	3787	10	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	20	-3	intron_retention	FALSE	canonical	2	3	junction_6	68.2453815196709	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	13	True	NA	-10	True	AATAAA	-18	NA	43025799	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43022195_43022606_43022767_43023377_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.31	chr4	-	3987	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	29	-3	intron_retention	FALSE	canonical	3	19	junction_4	61.1480989074885	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	5641	False	NA	-10	True	AATAAA	-18	NA	43025790	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.32	chr4	-	3583	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-23	-3	intron_retention	FALSE	canonical	0	0	junction_10	66.8392848555399	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	-3	True	NA	-10	True	AATAAA	-18	NA	43025779	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43024868_43025471
ES.23246.33	chr4	-	2431	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	57.5573626914924	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	12	True	NA	-10	True	AATAAA	-18	NA	43025800	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43021410_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.35	chr4	-	4007	10	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	66	-3	intron_retention	FALSE	canonical	1	1	junction_6	72.8392446113739	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	6417	False	NA	-10	True	AATAAA	-18	NA	43025014	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022195_43022606_43022767_43022842_43022943_43023369_43023494_43023671_43023816_43024562
ES.23246.36	chr4	-	4228	9	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	11	junction_3	58.7982514620971	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	-7	True	NA	-10	True	AATAAA	-18	NA	43025819	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.37	chr4	-	5709	7	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	18	-3	intron_retention	FALSE	canonical	3	132	junction_4	28.3588120735376	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTAGCTAAGATCTGTG	11	True	NA	-10	True	AATAAA	-18	NA	43025801	43017637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43023494_43023671_43023816_43024562
ES.23246.38	chr4	-	4482	1	NIC	ENSMUSG00000028454.17	novel	2312	11	NA	NA	-2414	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	9311	False	NA	-11	True	AATAAA	-17	NA	43022120	43017638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43017600_43022100
ES.23246.4	chr4	-	4105	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	18	526	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTCTTTATTTTGA	11	True	NA	NA	False	NA	NA	NA	43025801	43017108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.42	chr4	-	3671	11	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	27	-4	intron_retention	FALSE	canonical	0	0	junction_10	65.4767134178251	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTAGCTAAGATCTGT	20	True	NA	-11	True	AATAAA	-17	NA	43025792	43017638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43024868_43025471
ES.23246.43	chr4	-	4398	9	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-5	intron_retention	FALSE	canonical	3	84	junction_8	37.2841705687548	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTAGCTAAGATCTG	12	True	NA	-12	True	AATAAA	-16	NA	43025800	43017639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.44	chr4	-	3594	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-5	intron_retention	FALSE	canonical	0	0	junction_8	66.2043049959744	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTAGCTAAGATCTG	12	True	NA	-12	True	AATAAA	-16	NA	43025800	43017639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023511_43023671_43023816_43024562_43025075_43025779
ES.23246.46	chr4	-	3565	11	NNC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-5	intron_retention	FALSE	canonical	2	3	junction_7	56.591607151591	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTAGCTAAGATCTG	12	True	NA	-12	True	AATAAA	-16	NA	43025800	43017639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023377_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.47	chr4	-	3789	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	19	-6	intron_retention	FALSE	canonical	3	84	junction_9	35.3490531069158	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATGTAGCTAAGATCT	12	True	NA	-13	True	AATAAA	-15	NA	43025800	43017640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.48	chr4	-	3088	10	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	429	-7	intron_retention	FALSE	canonical	0	0	junction_5	57.5248738469813	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGTAGCTAAGATC	6780	False	NA	-14	True	AATAAA	-14	NA	43024651	43017641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021756_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ES.23246.5	chr4	-	4571	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-20	523	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCCGGCCTCTTTATTT	0	True	NA	NA	False	NA	NA	NA	43025776	43017111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.51	chr4	-	1724	7	ISM	ENSMUSG00000028454.17	ENSMUST00000067481.6	3525	11	0	3599	0	-3327	5prime_fragment	FALSE	canonical	3	84	junction_6	25.7983634278525	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGGATAGCTTTGTTGT	-7	True	NA	NA	False	NA	NA	NA	43025819	43021233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.52	chr4	-	2179	7	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	-31	-3334	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	45.0616861153192	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTCTTCTCGGATAGCT	-11	True	NA	NA	False	NA	NA	NA	43025787	43021240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
ES.23246.53	chr4	-	3228	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	308	-1662	-32	1662	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGGCTTTTCTTCTTT	0	True	NA	NA	False	AATAAA	-12	NA	43031402	43026027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.54	chr4	-	2659	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	308	-1093	-32	1093	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTCATGTATAAGTTTT	0	True	NA	NA	False	ATTAAA	-17	NA	43031402	43026596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.55	chr4	-	1624	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	243	7	-11	-7	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGTTGAGAGATGGC	8832	False	NA	-11	True	AATAAA	-12	NA	43031467	43027696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.56	chr4	-	1108	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-31	8	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	974.764386595551	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTCATTGATTGGGGGA	1	True	NA	1	True	AATAAA	-24	NA	43031401	43028017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.57	chr4	-	1360	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	182	332	-72	4	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	8771	False	NA	-3	True	AATAAA	-20	NA	43031528	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.58	chr4	-	1302	10	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	986.569527250242	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	8850	False	NA	-3	True	AATAAA	-20	NA	43031449	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031130_43031328
ES.23246.59	chr4	-	1221	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	989.319793757806	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	1	True	NA	-3	True	AATAAA	-20	NA	43031401	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031097_43031328
ES.23246.6	chr4	-	1501	5	ISM	ENSMUSG00000028454.17	ENSMUST00000149333.8	2312	11	4476	-257	-898	257	3prime_fragment	FALSE	canonical	3	131	junction_4	29.1322415890024	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGAAGCACTATGTT	9838	False	NA	NA	False	NA	NA	NA	43020604	43017377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266
ES.23246.60	chr4	-	1239	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	22	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	976.214811414317	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	-12	True	NA	-3	True	AATAAA	-20	NA	43031414	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029628_43029766_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.61	chr4	-	1278	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	987.180659413963	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	8958	False	NA	-3	True	AATAAA	-20	NA	43031341	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031223
ES.23246.62	chr4	-	1565	8	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	57	4	intron_retention	FALSE	canonical	3	2647	junction_4	234.262629524721	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	8998	False	NA	-3	True	AATAAA	-20	NA	43031301	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970
ES.23246.63	chr4	-	1378	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	4	intron_retention	FALSE	canonical	3	2352	junction_8	316.096479535916	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	0	True	NA	-3	True	AATAAA	-20	NA	43031402	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.64	chr4	-	1127	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-27	4	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	1042.82857531811	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCCTCATTGATTGG	5	True	NA	-3	True	AATAAA	-20	NA	43031397	43028021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.65	chr4	-	1499	8	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	3	intron_retention	FALSE	canonical	3	2352	junction_7	347.574393739921	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCCTCATTGATTG	0	True	NA	-4	True	AATAAA	-19	NA	43031402	43028022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.66	chr4	-	1213	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	991.248757257951	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCCTCATTGATTG	6	True	NA	-4	True	AATAAA	-19	NA	43031396	43028022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030984_43031109_43031328
ES.23246.67	chr4	-	2000	7	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-12	3	intron_retention	FALSE	canonical	3	2352	junction_6	375.369336639115	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCCTCATTGATTG	8831	False	NA	-4	True	AATAAA	-19	NA	43031468	43028022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029905_43030048_43030151_43030239_43030299_43030435_43031109_43031328
ES.23246.7	chr4	-	7737	19	Fusion	ENSMUSG00000028454.17_ENSMUSG00000028455.16	novel	4239	10	NA	NA	-24	7	intron_retention	FALSE	canonical	3	131	junction_4	1428.30183313724	1066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGAGGTGCTCGC	8	True	NA	0	True	AATAAA	-28	NA	43031394	43017627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.71	chr4	-	1420	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	960.592178467706	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTCCTCATTGATT	8830	False	NA	-5	True	AATAAA	-18	NA	43031469	43028023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028816_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.72	chr4	-	1222	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	991.248757257951	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTCCTCATTGATT	1	True	NA	-5	True	AATAAA	-18	NA	43031401	43028023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030527_43030970_43031109_43031328
ES.23246.73	chr4	-	1148	10	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	978.626815719069	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTCCTCATTGATT	0	True	NA	-5	True	AATAAA	-18	NA	43031402	43028023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031025_43031328
ES.23246.75	chr4	-	953	8	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-32	-3	combination_of_known_splicesites	FALSE	canonical	1	17	junction_1	1253.924891153	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGAAACTGTCCTCAT	0	True	NA	-10	True	AATAAA	-13	NA	43031402	43028028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43029278_43029359_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.76	chr4	-	1362	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	-33	-3	intron_retention	FALSE	canonical	3	2352	junction_8	339.680272462208	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGAAACTGTCCTCAT	-1	True	NA	-10	True	AATAAA	-13	NA	43031403	43028028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43028294_43028937_43029067_43029278_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ES.23246.8	chr4	-	3525	11	FSM	ENSMUSG00000028454.17	ENSMUST00000067481.6	3525	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	53.2560794651653	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ES.23246.9	chr4	-	4271	10	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	1	junction_3	55.1572387602418	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTAAGATCTGTGAG	7	True	NA	-8	True	AATAAA	-20	NA	43025769	43017635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43018039_43018147_43018219_43019211_43019456_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ES.23247.1	chr4	+	2176	6	NNC	ENSMUSG00000096974.3	novel	593	4	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.54919333848297	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATCAGGTGTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	43046000	43053250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43046558_43046645_43047843_43050604_43050682_43051236_43051378_43052944_43053052_43053153
ES.23247.2	chr4	+	2320	2	Genic_Genomic	ENSMUSG00000096974.3	novel	551	3	NA	NA	3341	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATCAGGTGTCCTGCT	3079	False	NA	NA	False	NA	NA	NA	43049382	43053250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_43049546_43051093
ES.23248.1	chr4	-	3308	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107958.8	3280	9	-28	0	-21	0	multi-exon	TRUE	canonical	3	8	junction_8	13.7636296085008	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	-17	True	NA	2	True	AATAAA	-21	NA	43040316	43032413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039965
ES.23248.10	chr4	-	3089	10	NIC	ENSMUSG00000036002.13	novel	3060	10	NA	NA	-10	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	19.5226996716421	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAACCTCTACTTTTT	-6	True	NA	-2	True	AATAAA	-17	NA	43040305	43032417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039814_43039919_43040273
ES.23248.11	chr4	-	2984	9	NIC	ENSMUSG00000036002.13	novel	3060	10	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	15.5724115023974	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAACCTCTACTTTTT	-5	True	NA	-2	True	AATAAA	-17	NA	43040304	43032417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43040273
ES.23248.13	chr4	-	3313	8	NIC	ENSMUSG00000036002.13	novel	3107	9	NA	NA	9	-5	intron_retention	FALSE	canonical	3	38	junction_5	6.80336051416609	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTAACCTCTACTTTT	456	False	NA	-3	True	AATAAA	-16	NA	43045750	43032418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43037207_43045647
ES.23248.14	chr4	-	2045	9	NNC	ENSMUSG00000036002.13	novel	3107	9	NA	NA	41	-994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.8823801742686	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGACTATTTGGGTGTT	-2	True	NA	NA	False	ATTAAA	-22	NA	43045718	43033407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037051_43037207_43045647
ES.23248.2	chr4	-	3121	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	-14	0	14	0	multi-exon	FALSE	canonical	3	38	junction_5	6.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	395	False	NA	2	True	AATAAA	-21	NA	43045811	43032413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
ES.23248.3	chr4	-	2970	8	NNC	ENSMUSG00000036002.13	novel	3107	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.2074095796243	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	456	False	NA	2	True	AATAAA	-21	NA	43045750	43032413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43033689_43033811_43033967_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
ES.23248.4	chr4	-	3512	9	ISM	ENSMUSG00000036002.13	ENSMUST00000107959.8	3060	10	-78	0	-74	0	intron_retention	FALSE	canonical	1	1	junction_8	15.8779524813497	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	5837	False	NA	2	True	AATAAA	-21	NA	43040369	43032413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039814
ES.23248.5	chr4	-	3073	9	FSM	ENSMUSG00000036002.13	ENSMUST00000036462.12	3074	9	-1	2	-1	-2	multi-exon	FALSE	canonical	1	1	junction_8	15.8779524813497	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	43046221	43032415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43046103
ES.23248.7	chr4	-	3429	11	NNC	ENSMUSG00000036002.13	novel	3107	9	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.5025579873651	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	-19	True	NA	0	True	AATAAA	-19	NA	43045735	43032415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43043293_43043491_43043571_43043761_43045647
ES.23248.8	chr4	-	3023	9	NNC	ENSMUSG00000036002.13	novel	3107	9	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	15.8069407223536	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACCTCTACTTTTTTT	-20	True	NA	0	True	AATAAA	-19	NA	43045736	43032415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43033689_43033811_43033967_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
ES.23248.9	chr4	-	3007	9	NIC	ENSMUSG00000036002.13	novel	3280	9	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	16.1844833096395	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAACCTCTACTTTTTT	347	False	NA	-1	True	AATAAA	-18	NA	43045859	43032416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045806
ES.23249.1	chr4	-	179	1	Intergenic	novelGene_19089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGGGGGGGGGGGC	NA	False	NA	NA	False	NA	NA	NA	43054111	43053932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43053900_43054100
ES.2325.1	chr10	+	4403	1	Intergenic	novelGene_1771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATAGCTGTGCTTGTCG	NA	False	NA	NA	False	ATTAAA	-15	NA	11176661	11181064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11176700_11181100
ES.2325.2	chr10	+	3251	1	Intergenic	novelGene_1773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTCTTGTGGAAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	11177310	11180561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11177300_11180600
ES.23250.1	chr4	+	6354	39	NNC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	-9	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	7.20995003459698	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	-7	True	NA	11	True	AATAAA	-13	NA	43058943	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255581_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.10	chr4	+	6359	39	NNC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.25743481615945	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	0	True	NA	11	True	AATAAA	-13	NA	43058950	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101809_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.11	chr4	+	6338	38	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.68950313213602	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	4	True	NA	12	True	AATAAA	-14	NA	43058954	43264871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.12	chr4	+	6459	41	NNC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.8283633817373	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTGGAGTCTGGAAT	4	True	NA	10	True	AATAAA	-12	NA	43058954	43264869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43158321_43158378_43161442_43161483_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.13	chr4	+	6876	38	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	3	-3	intron_retention	FALSE	canonical	3	15	junction_23	5.56612418970795	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTTGGAGTCTGGAA	5	True	NA	9	True	AATAAA	-11	NA	43058955	43264868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.14	chr4	+	3653	10	NNC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	6	-81	intron_retention	FALSE	canonical	0	0	junction_7	13.4824989441045	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTATGCTTGGGTTGTT	8	True	NA	NA	False	AATAAA	-16	NA	43058958	43168473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43158321_43158378_43161442_43161479_43165743
ES.23250.16	chr4	+	6204	38	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	6.87868368674089	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTTGGAGTCTGGAAT	13	False	NA	10	True	AATAAA	-12	NA	43058963	43264869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.17	chr4	+	3633	8	FSM	ENSMUSG00000028456.19	ENSMUST00000171234.2	3617	8	-16	0	-1	0	multi-exon	FALSE	canonical	3	22	junction_5	2.99659670905758	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTGTTTAAGCCAGAT	17	False	NA	NA	False	AATAAA	-15	NA	43058967	43168554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743
ES.23250.18	chr4	+	2125	8	FSM	ENSMUSG00000028456.19	ENSMUST00000171234.2	3617	8	-16	1508	-1	924	multi-exon	FALSE	canonical	3	22	junction_5	2.99659670905758	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGTTGGCAACTACTC	17	False	NA	NA	False	ATTAAA	-17	NA	43058967	43167046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743
ES.23250.2	chr4	+	6386	39	FSM	ENSMUSG00000028456.19	ENSMUST00000079978.13	6354	39	-25	-7	-9	7	multi-exon	FALSE	canonical	3	15	junction_23	5.54732847284128	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGAATTCTGTGAAT	-7	True	NA	19	True	AATAAA	-21	NA	43058943	43264878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.21	chr4	+	6322	39	NIC	ENSMUSG00000028456.19	novel	5037	40	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.97420529824159	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	13	True	NA	12	True	AATAAA	-14	NA	43059006	43264871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43161442_43161479_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.22	chr4	+	185	1	Intergenic	novelGene_19090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	4709	False	NA	NA	False	NA	NA	NA	43063745	43063930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43063700_43063900
ES.23250.23	chr4	+	180	1	Intergenic	novelGene_19091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43081693	43081873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43081700_43081900
ES.23250.24	chr4	+	4770	29	NNC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	-14620	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.34360752141422	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTCTGGAATTCTGT	NA	False	NA	15	True	AATAAA	-17	NA	43165947	43264874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239336_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.25	chr4	+	2640	1	Genic_Genomic	ENSMUSG00000028456.19	novel	NA	NA	NA	NA	-13455	1198	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGAAATGCTCTGTACT	NA	False	NA	NA	False	ATTAAA	-16	NA	43167112	43169752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_43167100_43169800
ES.23250.26	chr4	+	6245	31	ISM	ENSMUSG00000028456.19	ENSMUST00000163653.8	5034	40	120304	-1248	-1191	-1	3prime_fragment	FALSE	canonical	3	7	junction_15	6.274197602527	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	NA	False	NA	11	True	AATAAA	-13	NA	43179376	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.27	chr4	+	3810	21	ISM	ENSMUSG00000028456.19	ENSMUST00000163653.8	5034	40	181150	-1245	6416	-4	3prime_fragment	FALSE	canonical	3	7	junction_5	6.54580018026826	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTTTTGGAGTCTGGA	NA	False	NA	8	True	AATAAA	-10	NA	43240222	43264867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.28	chr4	+	5708	15	NIC	ENSMUSG00000028456.19	novel	6574	33	NA	NA	-1993	-1	intron_retention	FALSE	canonical	3	19	junction_4	4.71644971977691	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	NA	False	NA	11	True	AATAAA	-13	NA	43247173	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.29	chr4	+	3401	15	NNC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	343	0	intron_retention	FALSE	canonical	0	0	junction_3	8.45757720892325	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	38	False	NA	12	True	AATAAA	-14	NA	43249509	43264871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43249582_43250216_43250303_43255474_43255602_43255792_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.3	chr4	+	6306	38	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	6.8874919712303	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTCTGGAATTCTG	-6	True	NA	14	True	AATAAA	-16	NA	43058944	43264873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.30	chr4	+	3001	14	ISM	ENSMUSG00000028456.19	ENSMUST00000207569.2	14754	41	196505	1	-63	-1	3prime_fragment	FALSE	canonical	3	19	junction_2	4.66004037872645	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	5886	False	NA	11	True	AATAAA	-13	NA	43255473	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.4	chr4	+	6503	40	NNC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.1340672867016	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	-5	True	NA	12	True	AATAAA	-14	NA	43058945	43264871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43202051_43202181_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.6	chr4	+	6587	38	NIC	ENSMUSG00000028456.19	novel	5034	40	NA	NA	-4	2	intron_retention	FALSE	canonical	3	7	junction_23	6.10691210486426	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTCTGGAATTCTG	-2	True	NA	14	True	AATAAA	-16	NA	43058948	43264873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.7	chr4	+	6478	40	NNC	ENSMUSG00000028456.19	novel	5037	40	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.80001517218977	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	-1	True	NA	11	True	AATAAA	-13	NA	43058949	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43182964_43183071_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.8	chr4	+	6408	40	FSM	ENSMUSG00000028456.19	ENSMUST00000107952.9	5037	40	-123	-1248	-3	-1	multi-exon	FALSE	canonical	2	3	junction_8	7.18900468056413	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGGAGTCTGGAATT	-1	True	NA	11	True	AATAAA	-13	NA	43058949	43264870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43161442_43161479_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23250.9	chr4	+	6334	39	NNC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	6.85449283478805	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	-1	True	NA	12	True	AATAAA	-14	NA	43058949	43264871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239923_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ES.23251.1	chr4	-	146	1	Intergenic	novelGene_19092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAATAAAAAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	43083872	43083726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43083700_43083900
ES.23252.1	chr4	-	193	1	Intergenic	novelGene_19093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAAATTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	43088848	43088655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43088700_43088800
ES.23253.1	chr4	-	2033	2	Antisense	novelGene_ENSMUSG00000028456.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGCTTTTAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	43248475	43246397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_43247827_43247871
ES.23254.1	chr4	+	5227	26	NNC	ENSMUSG00000028457.19	novel	4463	29	NA	NA	-3	0	intron_retention	TRUE	canonical	0	0	junction_9	2.10751037957112	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTTGTATGATCTGT	-3	True	NA	NA	False	AATAAA	-25	NA	43267181	43373831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43267243_43271243_43271288_43291656_43291732_43302581_43302638_43304649_43304764_43305730_43305830_43308487_43308550_43311455_43311529_43311895_43311967_43320591_43320675_43322409_43322569_43324839_43324929_43334144_43334342_43342436_43342646_43344429_43344474_43353455_43353710_43355543_43355733_43356964_43357081_43364108_43364221_43365491_43366780_43367920_43368145_43369629_43369714_43370575_43370822_43370960_43371100_43372596_43372728_43372823
ES.23254.2	chr4	+	6551	26	NNC	ENSMUSG00000028457.19	novel	4706	30	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1.75088549025914	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTGTATGATCTGTTG	15	True	NA	NA	False	AATAAA	-27	NA	43267199	43373833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43267243_43271225_43271288_43291656_43291732_43302581_43302631_43304699_43304764_43305732_43305866_43308487_43308550_43311455_43311529_43311895_43311967_43320591_43320675_43322409_43322569_43324839_43324929_43334144_43334342_43342436_43342646_43344429_43344474_43353546_43353710_43355543_43355733_43356964_43357081_43361782_43361948_43364108_43366780_43367920_43368145_43369629_43369714_43370575_43370822_43370960_43371100_43372596_43372728_43372823
ES.23254.3	chr4	+	176	1	Intergenic	novelGene_19094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGGAAAGCAAGC	2404	False	NA	NA	False	NA	NA	NA	43269588	43269764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43269600_43269800
ES.23255.1	chr4	+	5436	11	ISM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	-53	-1	-53	1	intron_retention	FALSE	canonical	3	32	junction_5	4.72863616701476	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTTTGTGCCCCTC	NA	False	NA	18	True	AATAAA	-20	NA	43381925	43427089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
ES.23255.10	chr4	+	6274	12	NNC	ENSMUSG00000035969.16	novel	4256	11	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.3643047947651	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCATTTTCTTTGT	-16	True	NA	11	True	AATAAA	-13	NA	43401246	43427082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43402448_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.11	chr4	+	5598	12	FSM	ENSMUSG00000035969.16	ENSMUST00000098106.9	5325	12	-275	2	-275	-2	multi-exon	FALSE	canonical	1	3	junction_1	11.6178830520698	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATTTTCTTTGTGCCC	4897	False	NA	15	True	AATAAA	-17	NA	43406159	43427086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43406681_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.12	chr4	+	5578	11	ISM	ENSMUSG00000035969.16	ENSMUST00000098106.9	5325	12	-171	0	-171	0	intron_retention	FALSE	canonical	1	3	junction_1	11.774548823628	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	5001	False	NA	17	True	AATAAA	-19	NA	43406263	43427088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43406681_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
ES.23255.13	chr4	+	2977	10	ISM	ENSMUSG00000035969.16	ENSMUST00000173682.8	4256	11	6908	-427	-888	3	3prime_fragment	FALSE	canonical	3	25	junction_9	6.5734219812218	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCCAAGCCATTTT	5442	False	NA	5	True	AATAAA	-7	NA	43421603	43427076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.14	chr4	+	3120	4	NIC	ENSMUSG00000035969.16	novel	5093	10	NA	NA	-243	-2	intron_retention	FALSE	canonical	3	42	junction_1	2.05480466765633	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATTTTCTTTGTGCCC	7186	False	NA	15	True	AATAAA	-17	NA	43423347	43427086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43423752_43423919_43424945_43425296_43426129_43426227
ES.23255.2	chr4	+	5549	10	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	17	-7	intron_retention	FALSE	canonical	3	32	junction_4	4.97648792812415	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCCATTTTCTTTG	NA	False	NA	10	True	AATAAA	-12	NA	43381995	43427081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43382200_43414627_43416719_43421604_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
ES.23255.3	chr4	+	5279	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	25	-4	25	4	multi-exon	FALSE	canonical	3	25	junction_11	6.00550711451409	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGTGCCCCTCCCC	NA	False	NA	21	True	AATAAA	-23	NA	43382003	43427092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.4	chr4	+	5259	13	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.631349523844	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	10	True	NA	17	True	AATAAA	-19	NA	43382069	43427088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43382200_43413004_43413055_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.5	chr4	+	3726	10	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_1	13.1073440916077	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	10	True	NA	17	True	AATAAA	-19	NA	43382069	43427088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43382200_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.6	chr4	+	3107	11	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	12.4422666745252	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCATTTTCTTTGT	15	True	NA	11	True	AATAAA	-13	NA	43382074	43427082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43382200_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ES.23255.7	chr4	+	3867	8	NIC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	27	-6	intron_retention	FALSE	canonical	2	2	junction_1	14.3612289849854	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCATTTTCTTTGT	-20	True	NA	11	True	AATAAA	-13	NA	43382096	43427082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43382200_43421604_43422250_43422440_43422860_43423674_43423752_43423919_43424095_43424183_43424945_43425296_43426129_43426227
ES.23255.8	chr4	+	5154	12	NNC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.0178929961169	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGCCATTTTCTTTGTG	-18	True	NA	12	True	AATAAA	-14	NA	43382098	43427083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426248_43426366_43426447
ES.23255.9	chr4	+	5337	11	NNC	ENSMUSG00000035969.16	novel	5300	12	NA	NA	80	0	intron_retention	FALSE	canonical	0	0	junction_8	12.595634164265	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	33	False	NA	17	True	AATAAA	-19	NA	43382149	43427088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424771_43424945_43425296_43426129_43426227
ES.23256.1	chr4	+	183	1	Intergenic	novelGene_19095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTATAGCATAG	NA	False	NA	NA	False	NA	NA	NA	43432671	43432854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43432700_43432900
ES.23257.1	chr4	+	3391	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	304	252	304	18	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATCTCTAGTTTGGGAA	-33	True	NA	57	True	NA	NA	NA	43442242	43447812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ES.23257.2	chr4	+	3538	11	NNC	ENSMUSG00000028458.13	novel	3947	10	NA	NA	312	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.1604749265978	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGACTGTCATTAGCTCT	-25	True	NA	4	True	AATAAA	-16	NA	43442250	43448063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613_43447235_43447330
ES.23257.3	chr4	+	3645	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	312	-10	312	10	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCTCTCCTCATCCTAT	-25	True	NA	15	True	AATAAA	-27	NA	43442250	43448074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ES.23257.4	chr4	+	3772	9	NIC	ENSMUSG00000028458.13	novel	3947	10	NA	NA	327	8	intron_retention	FALSE	canonical	3	35	junction_3	6.50840802347241	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAGCTCTCCTCATCCT	-10	True	NA	13	True	AATAAA	-25	NA	43442265	43448072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ES.23257.5	chr4	+	3311	11	NNC	ENSMUSG00000028458.13	novel	3947	10	NA	NA	372	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.1604749265978	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGACTGTCATTAGCTCT	35	True	NA	4	True	AATAAA	-16	NA	43442310	43448063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43442487_43442749_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ES.23258.1	chr4	+	179	1	Intergenic	novelGene_19097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAGCATACTTT	3685	False	NA	NA	False	NA	NA	NA	43485964	43486143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43486000_43486100
ES.23259.1	chr4	+	823	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	-7	1	-7	-1	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGTGTTCCTCTGTGCT	-33	True	NA	13	True	AGTAAA	-44	NA	43493354	43495920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ES.23259.2	chr4	+	898	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-34	1	-7	-1	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGTGTTCCTCTGTGCT	-33	True	NA	13	True	AGTAAA	-44	NA	43493354	43495920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
ES.23259.3	chr4	+	843	7	NNC	ENSMUSG00000028461.13	novel	817	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.516301496667	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGTGTTCCTCTGTGCT	-8	True	NA	13	True	AGTAAA	-44	NA	43493379	43495920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43493537_43493607_43493760_43494496_43494542_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ES.2326.1	chr10	-	4267	1	Intergenic	novelGene_1772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCCGCCCCCCCCCACC	NA	False	NA	NA	False	AAAACA	-5	NA	11181254	11176987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_11177000_11181300
ES.23260.1	chr4	+	162	1	Intergenic	novelGene_19098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACCAAATAGCT	7762	False	NA	NA	False	NA	NA	NA	43516636	43516798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43516600_43516800
ES.23261.1	chr4	+	1811	10	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-3498	-2	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.2426401617091	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCCTTTTTACTGGCA	2910	False	NA	3	True	AATAAA	-12	NA	43558833	43567058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43558890_43562458_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23261.2	chr4	+	2009	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	-190	65	-190	-65	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCCTTGAATACTTCAT	6218	False	NA	-60	True	AATAGA	-14	NA	43562141	43566995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23261.3	chr4	+	1610	8	NIC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-198	-65	intron_retention	FALSE	canonical	3	77	junction_4	10.656032113698	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCCTTGAATACTTCAT	-27	True	NA	-60	True	AATAGA	-14	NA	43562614	43566995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43562960_43563049_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23261.4	chr4	+	1482	8	NIC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-194	74	intron_retention	FALSE	canonical	3	77	junction_4	10.656032113698	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTCACGTGCTCTG	-23	True	NA	18	True	AATAAA	-20	NA	43562618	43566871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43562960_43563049_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23261.5	chr4	+	1401	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	287	196	-194	67	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGCCTTTGCTCACG	-23	True	NA	11	True	AATAAA	-13	NA	43562618	43566864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23261.7	chr4	+	2131	13	NNC	ENSMUSG00000028466.16	novel	1884	9	NA	NA	-166	10587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.6323534564672	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGACTGGCGTTCTCC	5	True	NA	NA	False	AATAAA	-17	NA	43562646	43577647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468_43566781_43568236_43568332_43568930_43569014_43576781_43576886_43577087
ES.23261.8	chr4	+	2167	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	327	-610	-154	610	multi-exon	FALSE	canonical	3	77	junction_5	10.0615294563004	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTCTGGACCTCAGTA	17	True	NA	NA	False	AATAAA	-15	NA	43562658	43567670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ES.23262.1	chr4	+	2279	8	NNC	ENSMUSG00000028468.16	novel	1292	9	NA	NA	-7	-447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.35606035749581	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCCTCAACCACAAAAT	NA	False	NA	NA	False	NA	NA	NA	43578707	43582683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43579008_43579374_43579510_43579886_43580025_43580295_43580380_43580476_43580627_43580863_43581011_43581187_43581316_43581486
ES.23262.2	chr4	+	1480	9	FSM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	10	4398	-10	-41	multi-exon	FALSE	canonical	1	1	junction_1	1.96452920568771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATGCCCACCATGGCA	-16	True	NA	NA	False	NA	NA	NA	43578724	43583089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43579004_43579374_43579510_43579886_43580024_43580295_43580380_43580476_43580627_43580863_43581011_43581187_43581316_43581486_43581677_43582859
ES.23263.1	chr4	-	7574	53	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	547	54094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6865887673135	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAAGATCCGCCTGCTTC	7116	False	NA	NA	False	NA	NA	NA	43555399	43477424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43477453_43531517_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544278_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268
ES.23263.10	chr4	-	2668	4	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	106	junction_3	12.5698050899765	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-13	True	NA	-7	True	AATAAA	-14	NA	43499660	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43498030_43498585_43498705_43498895
ES.23263.11	chr4	-	1684	9	NIC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	41.3400532171888	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	1	True	NA	-7	True	AATAAA	-14	NA	43499646	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497880_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.13	chr4	-	1625	9	NNC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.4414852478455	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGCCTTCCTGTCTAA	5	True	NA	-9	True	AATAAA	-12	NA	43499642	43496147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43496739_43496820_43496910_43497079_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.14	chr4	-	3140	1	Genic_Genomic	ENSMUSG00000087142.8	novel	NA	NA	NA	NA	-47	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCAGTTCTTACAT	9900	False	NA	NA	False	AATAAA	-18	NA	43508794	43505654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_43505700_43508800
ES.23263.15	chr4	-	2205	9	FSM	ENSMUSG00000028464.17	ENSMUST00000030184.12	2175	9	-31	1	-31	0	multi-exon	FALSE	canonical	0	0	junction_1	5.8309518948453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAGGGCCCTTTAAGCC	9869	False	NA	-15	True	AATAAA	-15	NA	43523495	43514711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43516004_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ES.23263.16	chr4	-	1162	9	NNC	ENSMUSG00000028464.17	novel	1164	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.8309518948453	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAGGGCCCTTTAAGCC	9768	False	NA	-15	True	AATAAA	-15	NA	43523596	43514711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43514860_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ES.23263.17	chr4	-	175	1	Intergenic	novelGene_19099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAATGAAACAAAA	5532	False	NA	NA	False	NA	NA	NA	43528808	43528633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43528600_43528800
ES.23263.18	chr4	-	8578	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	-178	-7	91	7	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCTTTATGAGGAGAC	NA	False	NA	1	True	AATAAA	-19	NA	43562600	43531511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.19	chr4	-	8635	58	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-82	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	58.6617820933065	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCTTTATGAGGAGAC	11	False	NA	1	True	AATAAA	-19	NA	43562504	43531511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43558084_43558238_43562129
ES.23263.2	chr4	-	139	1	Intergenic	novelGene_19096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAAACAG	4693	False	NA	NA	False	NA	NA	NA	43479020	43478881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43478900_43479000
ES.23263.23	chr4	-	6162	41	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-1539	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	54.4440021949158	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGGCTTTATGAGGA	9217	False	NA	-2	True	AATAAA	-16	NA	43549186	43531514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545620_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085
ES.23263.24	chr4	-	8373	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	48	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	53.1866658907233	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGGCTTTATGAGGA	141	False	NA	-2	True	AATAAA	-16	NA	43562374	43531514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539248_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.29	chr4	-	9115	55	ISM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	4859	-1	897	1	intron_retention	FALSE	canonical	2	114	junction_34	45.5779378921049	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	4952	False	NA	-5	True	AATAAA	-13	NA	43557563	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288
ES.23263.3	chr4	-	3078	4	NIC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	19	0	intron_retention	FALSE	canonical	3	106	junction_2	10.3387082795139	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	5	True	NA	-3	True	AATAAA	-18	NA	43499642	43496141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43498705_43498895_43499338_43499469
ES.23263.30	chr4	-	8356	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_55	52.5772997497931	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	2	True	NA	-5	True	AATAAA	-13	NA	43562411	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556360_43556620_43556784_43562129
ES.23263.31	chr4	-	8229	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-106	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_53	53.0575802687947	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	3	True	NA	-5	True	AATAAA	-13	NA	43562263	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555749_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.33	chr4	-	7075	32	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	65	1	intron_retention	FALSE	canonical	3	153	junction_27	33.8556647457972	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	8695	False	NA	-5	True	AATAAA	-13	NA	43547582	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43533013_43533125_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544970_43545093_43545989_43546749_43546917_43547501
ES.23263.34	chr4	-	7614	52	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	58	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	62.4102030814961	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	151	False	NA	-5	True	AATAAA	-13	NA	43562364	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43535820_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545225_43545401_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547976_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.35	chr4	-	8972	56	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-69	1	intron_retention	FALSE	canonical	2	114	junction_33	44.5392797204504	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	-4	True	NA	-5	True	AATAAA	-13	NA	43562491	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.36	chr4	-	6461	43	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	1440	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	54.1260444223228	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	8572	False	NA	-5	True	AATAAA	-13	NA	43549831	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544869_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722
ES.23263.38	chr4	-	8194	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-74	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	53.2084578544135	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	2	True	NA	-5	True	AATAAA	-13	NA	43562231	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547510_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.4	chr4	-	1853	8	NIC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	16	0	intron_retention	FALSE	canonical	3	105	junction_3	13.6844914455178	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	2	True	NA	-7	True	AATAAA	-14	NA	43499645	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.40	chr4	-	8324	56	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_49	52.7163123404593	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	0	True	NA	-5	True	AATAAA	-13	NA	43562413	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.41	chr4	-	7408	53	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	19	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.5435927740035	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	10	True	NA	-5	True	AATAAA	-13	NA	43562403	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43531661_43533594_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.43	chr4	-	4045	27	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	4684	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.273780659571	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	NA	False	NA	-5	True	AATAAA	-13	NA	43542963	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533673_43533855_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874
ES.23263.44	chr4	-	7395	52	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-303	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	62.4042395961156	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	3752	False	NA	-5	True	AATAAA	-13	NA	43558763	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43535820_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545225_43545401_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43558745
ES.23263.49	chr4	-	8383	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-1246	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	59.5812957527061	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGCCTGGCTTTATGA	5323	False	NA	-5	True	AATAAA	-13	NA	43557192	43531517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542627_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43556933
ES.23263.52	chr4	-	8154	57	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_56	53.1124354889835	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	4081	False	NA	-6	True	AATAAA	-12	NA	43558434	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43558380
ES.23263.53	chr4	-	8812	48	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	236	0	intron_retention	FALSE	canonical	2	114	junction_32	45.1710696343898	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	6805	False	NA	-6	True	AATAAA	-12	NA	43555710	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544970_43545093_43545229_43545406_43545521_43545605_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549832_43549937_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601
ES.23263.59	chr4	-	5107	30	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	3159	0	intron_retention	FALSE	canonical	3	153	junction_29	35.9562423985007	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	NA	False	NA	-6	True	AATAAA	-12	NA	43544488	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279
ES.23263.6	chr4	-	2134	7	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_4	12.5088857306405	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-14	True	NA	-7	True	AATAAA	-14	NA	43499661	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43496910_43497086_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.63	chr4	-	5029	32	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	2679	0	intron_retention	FALSE	canonical	3	153	junction_29	37.0595605772235	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	NA	False	NA	-6	True	AATAAA	-12	NA	43544968	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840
ES.23263.64	chr4	-	8376	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.8597223630384	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	2	True	NA	-6	True	AATAAA	-12	NA	43562411	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533673_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.65	chr4	-	8284	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_56	52.9749862757733	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	1	True	NA	-6	True	AATAAA	-12	NA	43558402	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43558218
ES.23263.67	chr4	-	8121	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-306	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_56	53.1124354889835	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	3749	False	NA	-6	True	AATAAA	-12	NA	43558766	43531518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43558745
ES.23263.69	chr4	-	5868	38	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-13	-2	intron_retention	FALSE	canonical	2	114	junction_33	40.8944909054195	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCAGCCTGGCTTTA	8617	False	NA	-8	True	AATAAA	-10	NA	43547660	43531520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501
ES.23263.7	chr4	-	1885	8	FSM	ENSMUSG00000051517.15	ENSMUST00000125834.8	1508	8	1	-378	1	0	multi-exon	FALSE	canonical	3	106	junction_5	13.3248272186983	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-13	True	NA	-7	True	AATAAA	-14	NA	43499660	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43496721_43496820_43496910_43497086_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.70	chr4	-	8217	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-85	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	53.2084578544135	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCAGCCTGGCTTTA	-9	True	NA	-8	True	AATAAA	-10	NA	43562242	43531520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547495_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.71	chr4	-	7890	56	NIC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-70	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_36	53.6520285291177	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCAGCCTGGCTTTA	6	True	NA	-8	True	AATAAA	-10	NA	43562227	43531520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545648_43546851_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.75	chr4	-	8197	57	NNC	ENSMUSG00000028465.17	novel	8393	57	NA	NA	-81	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.7583813160038	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCTGCAGCCTGGCTT	-5	True	NA	-10	True	AATAAA	-8	NA	43562238	43531522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534759_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545225_43545403_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ES.23263.76	chr4	-	746	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	182	9	-87	-9	multi-exon	FALSE	canonical	3	68	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTTATTATCTTCATA	6	False	NA	-39	True	NA	NA	NA	43562509	43559351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43559718_43562129
ES.23263.8	chr4	-	1473	8	NIC	ENSMUSG00000051517.15	novel	1659	9	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	45.5299856340493	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	5	True	NA	-7	True	AATAAA	-14	NA	43499642	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43496721_43496820_43496910_43497086_43497317_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23263.9	chr4	-	1624	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	31	4	-3	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-17	True	NA	-7	True	AATAAA	-14	NA	43499664	43496145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ES.23264.1	chr4	-	3575	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	-32	1	-32	0	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGTGTGGTGTGTCTGA	-39	True	NA	-2	True	AATAAA	-15	NA	43578905	43566928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23264.10	chr4	-	1998	13	NNC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	-1061	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	17.4553000547112	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	8163	False	NA	-8	True	AATAAA	-9	NA	43570703	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570391_43570449_43570671
ES.23264.2	chr4	-	4338	13	FSM	ENSMUSG00000028467.16	ENSMUST00000128403.8	3543	13	-796	1	-12	0	multi-exon	FALSE	canonical	3	36	junction_10	7.77817459305202	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGTGTGGTGTGTCTGA	-19	True	NA	-2	True	AATAAA	-15	NA	43578885	43566928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569956_43570036_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23264.4	chr4	-	3599	15	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	-12	-6	intron_retention	FALSE	canonical	0	0	junction_8	14.9545228978407	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	-19	True	NA	-8	True	AATAAA	-9	NA	43578885	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569829_43569956_43570036_43570191_43570345_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23264.5	chr4	-	3703	16	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	32	junction_8	9.69398438895655	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	-18	True	NA	-8	True	AATAAA	-9	NA	43578884	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23264.6	chr4	-	3354	13	NIC	ENSMUSG00000028467.16	novel	3130	15	NA	NA	6	-6	intron_retention	FALSE	canonical	3	36	junction_10	8.1594355741613	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	6306	False	NA	-8	True	AATAAA	-9	NA	43578083	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23264.8	chr4	-	6183	12	NIC	ENSMUSG00000028467.16	novel	3531	15	NA	NA	1264	-6	intron_retention	FALSE	canonical	0	0	junction_9	16.6639116180212	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	7564	False	NA	-8	True	AATAAA	-9	NA	43576825	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569956_43570036_43570907_43571188_43571408_43573750_43573867_43574027
ES.23264.9	chr4	-	4489	11	NIC	ENSMUSG00000028467.16	novel	3543	13	NA	NA	10	-6	intron_retention	FALSE	canonical	3	36	junction_8	8.45221864364618	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGTTAGTGTGGTGT	3	True	NA	-8	True	AATAAA	-9	NA	43578863	43566934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43567917_43567999_43568545_43568654_43568807_43568885_43568994_43569180_43569956_43570036_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ES.23265.1	chr4	+	1508	1	ISM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	7257	8	4758	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATGTTAAGTGTCT	7024	False	NA	2	True	AATAAA	-6	NA	43585971	43587479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43586000_43587500
ES.23266.1	chr4	-	164	1	Antisense	novelGene_ENSMUSG00000085351.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCAACCCAATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	43608299	43608135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_43608100_43608300
ES.23267.1	chr4	+	4355	21	Fusion	ENSMUSG00000028469.16_ENSMUSG00002075231.1	novel	3660	22	NA	NA	-23	-22	intron_retention	TRUE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAACAACAACAACAAAA	17	True	NA	NA	False	NA	NA	NA	43631401	43651222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_43632852_43633524_43633731_43640139_43640254_43640535_43640672_43640918_43641331_43641548_43641634_43643053_43643175_43643334_43643410_43643605_43643684_43644082_43644188_43644307_43644380_43646540_43646701_43646915_43647072_43647148_43647318_43647470_43647618_43648076_43648201_43648346_43648416_43650148_43650324_43650393_43650493_43650707_43650800_43650912
ES.23267.2	chr4	+	4137	22	FSM	ENSMUSG00000028469.16_ENSMUSG00002075231.1	ENSMUST00000030191.15	3660	22	-477	0	33	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4630753805464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGTCATTGTCTGGG	30	False	NA	NA	False	TATAAA	-18	NA	43631457	43651244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43632852_43633524_43633731_43640139_43640254_43640535_43640672_43640918_43641014_43641193_43641327_43641548_43641634_43643053_43643175_43643334_43643410_43643605_43643684_43644082_43644188_43644307_43644380_43646540_43646701_43646915_43647072_43647148_43647318_43647470_43647618_43648076_43648201_43648346_43648416_43650148_43650324_43650393_43650493_43650707_43650800_43650912
ES.23268.1	chr4	-	625	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	-15	0	-15	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	5534	False	NA	-7	True	AATAAA	-14	NA	43656481	43654228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ES.23268.2	chr4	-	719	4	NIC	ENSMUSG00000028470.11	novel	610	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	693	junction_2	26.0426999794995	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	9	True	NA	-7	True	AATAAA	-14	NA	43656445	43654228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_43654412_43654512_43654821_43654905_43655047_43656358
ES.23268.3	chr4	-	626	5	NNC	ENSMUSG00000028470.11	novel	610	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	311.576134355634	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	3	True	NA	-7	True	AATAAA	-14	NA	43656451	43654228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43654412_43654512_43654617_43654715_43654821_43654905_43655047_43656358
ES.23268.4	chr4	-	637	5	NNC	ENSMUSG00000028470.11	novel	600	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	355.342352527812	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	3	True	NA	-7	True	AATAAA	-14	NA	43656451	43654228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_43654423_43654512_43654617_43654715_43654821_43654905_43655047_43656358
ES.23268.5	chr4	-	2083	2	ISM	ENSMUSG00000028470.11	ENSMUST00000151514.2	692	4	5	1	0	-1	intron_retention	FALSE	canonical	3	704	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTATCCCTGTCT	11	True	NA	-9	True	AATAAA	-12	NA	43656443	43654230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_43654586_43654715
ES.23268.6	chr4	-	618	5	FSM	ENSMUSG00000028470.11	ENSMUST00000151238.8	600	5	-22	4	1	-1	multi-exon	FALSE	canonical	3	13	junction_1	305.186316043167	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTATCCCTGTCT	-11	True	NA	-9	True	AATAAA	-12	NA	43656465	43654230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_43654423_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ES.23269.1	chr4	+	497	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	-123	-77	-123	77	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAATAGA	8381	False	NA	NA	False	ATTAAA	-20	NA	43663919	43664416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43663900_43664400
ES.2327.1	chr10	+	155	1	Intergenic	novelGene_1774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	11437534	11437689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_11437500_11437700
ES.23270.1	chr4	+	6587	13	Fusion	ENSMUSG00000078716.11_ENSMUSG00002074925.1	novel	4775	13	NA	NA	-20	1699	multi-exon	FALSE	canonical	0	0	junction_1	4.46203117674252	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTTGCTTGGAGTG	35	False	NA	NA	False	NA	NA	NA	43668950	43694516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_43669173_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686066_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.10	chr4	+	4763	12	NIC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	2.80495429464391	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCTTCCCTTATCT	267	False	NA	NA	False	AAGAAA	-1	NA	43669575	43692668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.11	chr4	+	2459	12	NIC	ENSMUSG00000078716.11	novel	4775	13	NA	NA	-561	61	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	4.01031727274778	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGAGTCCTTCTTAAG	4226	False	NA	NA	False	NA	NA	NA	43673898	43690557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690030
ES.23270.12	chr4	+	4251	11	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	-502	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.97994974842648	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGCTACTCCTTCCC	4285	False	NA	NA	False	NA	NA	NA	43673957	43692662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43674090_43674436_43674645_43680658_43680793_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689585_43689690_43689808_43690026
ES.23270.2	chr4	+	4780	13	FSM	ENSMUSG00000078716.11	ENSMUST00000107865.9	4775	13	-5	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	3.83966867783609	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCTTCCCTTATCT	50	False	NA	NA	False	AAGAAA	-1	NA	43668965	43692668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43669173_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.3	chr4	+	4895	13	FSM	ENSMUSG00000078716.11	ENSMUST00000107866.9	5102	13	-243	450	-24	-174	multi-exon	FALSE	canonical	2	4	junction_9	2.419538523493	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACTGAATAAAGTAGC	347	False	NA	NA	False	NA	NA	NA	43669262	43692218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.4	chr4	+	4883	13	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	-15	-171	intron_retention	FALSE	canonical	0	0	junction_4	4.34613493680177	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTGAATAAAGTAGCTGA	-5	True	NA	NA	False	NA	NA	NA	43669271	43692221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43680995_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686066_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.5	chr4	+	5343	13	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_11	3.7886893072231	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCTTCCCTTATCT	-1	True	NA	NA	False	AAGAAA	-1	NA	43669275	43692668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689585_43689690_43689808_43690026
ES.23270.7	chr4	+	5314	13	FSM	ENSMUSG00000078716.11	ENSMUST00000107866.9	5102	13	-212	0	7	0	multi-exon	FALSE	canonical	2	4	junction_9	2.419538523493	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCTTCCCTTATCT	-15	True	NA	NA	False	AAGAAA	-1	NA	43669293	43692668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.8	chr4	+	5185	13	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	23	-10	intron_retention	FALSE	canonical	0	0	junction_4	3.72677996249965	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAAATGCTACTCCT	1	True	NA	NA	False	NA	NA	NA	43669309	43692658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681148_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ES.23270.9	chr4	+	4841	14	NNC	ENSMUSG00000078716.11	novel	5102	13	NA	NA	31	-172	intron_retention	FALSE	canonical	0	0	junction_10	4.69797891833922	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGAATAAAGTAGCTG	9	True	NA	NA	False	NA	NA	NA	43669317	43692220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43670035_43673899_43674090_43674436_43674645_43677198_43677254_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686066_43686190_43689426_43689574_43689690_43689808_43690026
ES.23271.1	chr4	+	177	1	Intergenic	novelGene_19100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	43813008	43813185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43813000_43813200
ES.23272.1	chr4	+	4439	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	-6	0	-6	0	multi-exon	FALSE	canonical	3	46	junction_14	9.31812749429841	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTCTTTACTGT	NA	False	NA	NA	False	AATGAA	-19	NA	43875523	43944806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.10	chr4	+	3809	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	24	600	24	-539	multi-exon	FALSE	canonical	3	46	junction_14	9.31812749429841	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGTTAGCCCCATA	12	True	NA	NA	False	NA	NA	NA	43875553	43944206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.11	chr4	+	2996	1	NIC	ENSMUSG00000028476.14	novel	4549	22	NA	NA	13340	-50517	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43888869	43891865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_43888900_43891900
ES.23272.12	chr4	+	4940	13	NNC	ENSMUSG00000028476.14	novel	4549	22	NA	NA	-23843	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.660713595343	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTGTACTTCCAAGC	NA	False	NA	NA	False	AATAAA	-14	NA	43916554	43944747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43918107_43918313_43918494_43922811_43923025_43925065_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.13	chr4	+	6799	11	NNC	ENSMUSG00000028476.14	novel	4549	22	NA	NA	-20936	-3	intron_retention	FALSE	canonical	0	0	junction_1	22.3159136044214	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAGTTGTGTCTTTAC	NA	False	NA	NA	False	AATGAA	-16	NA	43919461	43944803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43920296_43920688_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.14	chr4	+	3602	5	ISM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	60473	2	-4395	-2	3prime_fragment	FALSE	canonical	3	57	junction_4	8.78919791562347	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGTTGTGTCTTTACT	NA	False	NA	NA	False	AATGAA	-17	NA	43936002	43944804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.15	chr4	+	1896	2	ISM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	66665	2	1797	-2	3prime_fragment	FALSE	canonical	3	57	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGTTGTGTCTTTACT	4834	False	NA	NA	False	AATGAA	-17	NA	43942194	43944804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43942430_43943143
ES.23272.2	chr4	+	4157	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	-6	282	-6	-221	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTGAAAGTGGGCACT	NA	False	NA	NA	False	AATATA	-24	NA	43875523	43944524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.3	chr4	+	4557	22	FSM	ENSMUSG00000028476.14	ENSMUST00000128463.8	4549	22	-5	-3	-5	3	multi-exon	FALSE	canonical	0	0	junction_15	20.296107330942	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTGTACTTCCAAGCA	-17	True	NA	NA	False	AATAAA	-15	NA	43875524	43944748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930575_43930753_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.4	chr4	+	3996	17	NNC	ENSMUSG00000028476.14	novel	4433	21	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.419482722107	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGTACTTCCAAGCAA	-17	True	NA	NA	False	AATAAA	-16	NA	43875524	43944749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43913803_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.5	chr4	+	4530	22	NNC	ENSMUSG00000028476.14	novel	4433	21	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	20.4240754293274	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGAGTTGTGTCTTTA	-12	True	NA	NA	False	AATGAA	-15	NA	43875529	43944802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43901136_43901238_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23272.6	chr4	+	1906	8	ISM	ENSMUSG00000028476.14	ENSMUST00000128463.8	4549	22	1	31422	1	-29059	5prime_fragment	FALSE	canonical	3	51	junction_1	6.32455532033676	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACTAAAATATTGTC	-11	True	NA	NA	False	AATAAA	-17	NA	43875530	43913323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931
ES.23272.7	chr4	+	931	9	NNC	ENSMUSG00000028476.14	novel	4433	21	NA	NA	1	-29085	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	20.0733031661458	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAGAAAATTAA	-11	True	NA	NA	False	NA	NA	NA	43875530	43913297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913078
ES.23272.9	chr4	+	4335	20	NNC	ENSMUSG00000028476.14	novel	4433	21	NA	NA	16	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.5415593948868	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTACTTCCAAGCAATGT	4	True	NA	NA	False	AATAAA	-19	NA	43875545	43944752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43875706_43890963_43891023_43894818_43894896_43897975_43898069_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ES.23273.1	chr4	+	2249	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	75	-4	75	4	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTAATGCGATTCGAT	-3	True	NA	40	True	AATAAA	-25	NA	43957475	43979122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
ES.23273.2	chr4	+	5523	5	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	103	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	118.733683089509	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTTCCTCTAATGCG	-11	True	NA	33	True	AATAAA	-18	NA	43957503	43979115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43971718_43975293
ES.23273.3	chr4	+	1996	5	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	107.627540620419	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTCCTCTAATGCGA	-12	True	NA	34	True	AATAAA	-19	NA	43957694	43979116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43957774_43968111_43968193_43968571_43968676_43970499_43970578_43977462
ES.23273.4	chr4	+	1964	6	NNC	ENSMUSG00000028480.15	novel	2320	5	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.640705173963	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTCTTCCTCTAATGC	-7	True	NA	32	True	AATAAA	-17	NA	43957699	43979114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462_43978523_43978575
ES.23273.5	chr4	+	178	1	Intergenic	novelGene_19101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACGGA	3560	False	NA	NA	False	NA	NA	NA	43961266	43961444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43961300_43961400
ES.23273.6	chr4	+	1601	1	Intergenic	novelGene_19103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	2754	False	NA	NA	False	NA	NA	NA	43975242	43976843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43975200_43976800
ES.23274.1	chr4	-	196	1	Intergenic	novelGene_19102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGGTGATC	627	False	NA	NA	False	NA	NA	NA	43971539	43971343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43971300_43971500
ES.23275.1	chr4	-	1303	3	Antisense	novelGene_ENSMUSG00000070999.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTTTCATGGTGCT	NA	False	NA	NA	False	NA	NA	NA	43993198	43983608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_43984710_43985992_43986071_43993074
ES.23275.2	chr4	-	4535	1	Intergenic	novelGene_19104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCATTGTCTTTGATTC	NA	False	NA	NA	False	AATAAA	-12	NA	43993201	43988666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43988700_43993200
ES.23275.3	chr4	-	2420	1	Intergenic	novelGene_19105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAACCAGAAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	43993199	43990779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_43990800_43993200
ES.23276.1	chr4	+	3416	1	Intergenic	novelGene_19106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCGAGATTATCGCAT	NA	False	NA	NA	False	NA	NA	NA	43994794	43998210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_43994800_43998200
ES.23277.1	chr4	+	1537	6	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	-644	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	519.17110859523	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	NA	False	NA	20	True	AATAAA	-20	NA	44003807	44032845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44003885_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ES.23277.11	chr4	+	6509	4	NIC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1242	junction_1	78.6652542246081	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	-7	True	NA	21	True	AATAAA	-21	NA	44012670	44032846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44013009_44018812_44018851_44019873_44025561_44032400
ES.23277.13	chr4	+	1021	4	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	640.788229882194	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	9	True	NA	20	True	AATAAA	-20	NA	44012686	44032845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44013009_44019849_44019992_44025448_44025561_44032400
ES.23277.14	chr4	+	3014	1	NIC	ENSMUSG00000028478.19	novel	1710	6	NA	NA	206	-16940	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTAAATATGCTGTG	214	False	NA	NA	False	ATTAAA	-13	NA	44012891	44015905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44012900_44015900
ES.23277.15	chr4	+	4243	1	Genic_Genomic	ENSMUSG00000028478.19	novel	NA	NA	NA	NA	15922	4	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCATCTTTAATTGATC	8669	False	NA	25	True	AATAAA	-25	NA	44028607	44032850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_44028600_44032800
ES.23277.2	chr4	+	3257	2	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	-638	-17398	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGAAGGCTTTGGGGTA	NA	False	NA	NA	False	NA	NA	NA	44003813	44015447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44003885_44012261
ES.23277.4	chr4	+	1880	7	NNC	ENSMUSG00000028478.19	novel	1135	7	NA	NA	-619	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	629.495300485503	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATGTATACATGAAGC	NA	False	NA	11	True	AATAAA	-11	NA	44003832	44032836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44003885_44009634_44010012_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ES.23277.5	chr4	+	222	1	Intergenic	novelGene_19107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAAAGATATGTGTAT	7237	False	NA	NA	False	NA	NA	NA	44011683	44011905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44011700_44011900
ES.23277.6	chr4	+	1078	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	-48	1	0	0	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	8191	False	NA	20	True	AATAAA	-20	NA	44012637	44032845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ES.23277.7	chr4	+	1129	6	FSM	ENSMUSG00000028478.19	ENSMUST00000107849.10	1099	6	-40	10	0	-9	multi-exon	FALSE	canonical	2	8	junction_4	631.636794368409	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATGTATACATGAAGC	8191	False	NA	11	True	AATAAA	-11	NA	44012637	44032836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44030214_44030269_44032400
ES.23278.1	chr4	-	3320	3	ISM	ENSMUSG00000028479.19	ENSMUST00000174522.8	1797	9	15011	-2626	15011	-109	3prime_fragment	FALSE	canonical	3	59	junction_1	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTATTTGTGGCCCTG	NA	False	NA	NA	False	CATAAA	-22	NA	44040286	44034183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_44037354_44038946_44039064_44040253
ES.23278.10	chr4	-	2727	12	NNC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	17.3009339068614	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTGATATCTGGTCC	-30	True	NA	-11	True	NA	NA	NA	44072665	44036830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072436
ES.23278.13	chr4	-	1297	4	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	147	18163	-7	316	5prime_fragment	FALSE	canonical	3	48	junction_1	9.97775303139718	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCGCCGGGTGCAGTTTG	4	True	NA	NA	False	AATAAA	-14	NA	44072631	44054988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_44055358_44059775_44060228_44066754_44066961_44072361
ES.23278.14	chr4	-	3141	3	ISM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	41	20843	-1	2031	5prime_fragment	FALSE	canonical	3	64	junction_2	4	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTGTGTGTCTATG	281	False	NA	NA	False	AATAAA	-26	NA	44072737	44057668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_44060228_44066754_44066961_44072361
ES.23278.15	chr4	-	3205	4	FSM	ENSMUSG00000028479.19	ENSMUST00000173569.2	897	4	-6	-2302	-6	2030	multi-exon	FALSE	canonical	0	0	junction_1	29.9369708257569	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTGTGTGTGTCTAT	276	False	NA	NA	False	AATAAA	-25	NA	44072742	44057669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44060228_44063086_44063147_44066754_44066961_44072361
ES.23278.16	chr4	-	2999	3	NNC	ENSMUSG00000028479.19	novel	897	4	NA	NA	-28	2022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGCTTATTTTGTGT	-17	True	NA	NA	False	AATAAA	-17	NA	44072652	44057677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44060180_44066754_44066961_44072361
ES.23278.17	chr4	-	158	1	Intergenic	novelGene_19108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5779	False	NA	NA	False	NA	NA	NA	44061273	44061115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44061100_44061300
ES.23278.18	chr4	-	2959	1	Intergenic	novelGene_19109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	6721	False	NA	NA	False	NA	NA	NA	44066297	44063338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44063300_44066300
ES.23278.2	chr4	-	3224	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	71	-375	29	359	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCAGCCTCTTAGGCTT	311	False	NA	NA	False	NA	NA	NA	44072707	44036450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
ES.23278.3	chr4	-	2881	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	42	-3	0	3	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCTGGTCCCAGAAATA	282	False	NA	-3	True	NA	NA	NA	44072736	44036822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
ES.23278.4	chr4	-	7048	10	NIC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_8	19.6525372973116	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	5927	False	NA	-6	True	NA	NA	NA	44067091	44036825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052980_44055204_44060228_44066754
ES.23278.6	chr4	-	2842	12	NIC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	17.0352090420822	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	-5	True	NA	-6	True	NA	NA	NA	44072726	44036825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072387
ES.23278.7	chr4	-	2886	13	NIC	ENSMUSG00000028479.19	novel	2920	12	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	21.6082545955629	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	334	False	44072721	-6	True	NA	NA	NA	44072684	44036825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44063086_44063147_44066754_44066961_44072361
ES.23278.9	chr4	-	4151	11	NNC	ENSMUSG00000028479.19	novel	5384	12	NA	NA	1081	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.5456547327251	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGATATCTGGTCCCA	7179	False	NA	-9	True	NA	NA	NA	44065839	44036828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44063982
ES.23279.1	chr4	-	202	1	Intergenic	novelGene_19110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAGTTATAATACTGC	NA	False	NA	NA	False	NA	NA	NA	44093690	44093488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44093500_44093700
ES.2328.1	chr10	+	513	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	16	84	16	-84	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGAGTCATGTGTAT	NA	False	NA	NA	False	AATGAA	-24	NA	11484982	11485495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11485000_11485500
ES.2328.2	chr10	+	817	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	439	-643	364	643	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGATCTGCATTGATTT	NA	False	NA	NA	False	NA	NA	NA	11485405	11486222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_11485400_11486200
ES.23280.1	chr4	-	160	2	Antisense	novelGene_ENSMUSG00000087326.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	44109682	44101620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_44101643_44109544
ES.23280.2	chr4	-	200	1	Intergenic	novelGene_19111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGCATCAGATCTCATTA	NA	False	NA	NA	False	NA	NA	NA	44109682	44109482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44109500_44109700
ES.23281.1	chr4	+	4896	1	Antisense	novelGene_ENSMUSG00000035696.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44149093	44153989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_44149100_44154000
ES.23281.2	chr4	+	1802	2	Antisense	novelGene_ENSMUSG00000035696.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCAGTGGCTTAATCC	NA	False	NA	NA	False	NA	NA	NA	44149093	44154016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_44149239_44152359
ES.23282.1	chr4	+	3039	2	Antisense	novelGene_ENSMUSG00000035696.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44156034	44159641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_44157335_44157902
ES.23282.2	chr4	+	3630	1	Antisense	novelGene_ENSMUSG00000035696.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAATGAAAATCCTCAAAC	NA	False	NA	NA	False	AAAAAG	-5	NA	44156036	44159666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_44156000_44159700
ES.23283.1	chr4	+	144	1	Intergenic	novelGene_19112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAAAAACAAAAACA	9994	False	NA	NA	False	NA	NA	NA	44177595	44177739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44177600_44177700
ES.23284.1	chr4	+	235	1	Intergenic	novelGene_19113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATTAGTGTACAAAAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	44198733	44198968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44198700_44199000
ES.23285.1	chr4	+	188	1	Intergenic	novelGene_19115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATACATTAAAAAAAA	NA	False	NA	7	True	NA	NA	NA	44223151	44223339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44223200_44223300
ES.23286.1	chr4	-	5247	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTTTCATGTAAGGCG	1164	False	NA	0	True	AATAAA	-26	NA	44168103	44126209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.10	chr4	-	5532	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-75	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	25.3178145884907	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	1187	False	NA	-3	True	AATAAA	-23	NA	44168080	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167465
ES.23286.11	chr4	-	5371	13	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-136	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	28.0530251884217	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	-10	True	NA	-3	True	AATAAA	-23	NA	44233925	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44187448_44187520_44233542
ES.23286.12	chr4	-	5121	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-75	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	23.8514150523612	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	1187	False	NA	-3	True	AATAAA	-23	NA	44168080	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149139_44152359_44152554_44167626
ES.23286.13	chr4	-	5942	10	ISM	ENSMUSG00000035696.16	ENSMUST00000107836.8	1694	12	5215	-3207	5215	2	3prime_fragment	FALSE	canonical	3	42	junction_6	11.5223882983853	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	261	False	NA	-3	True	AATAAA	-23	NA	44153728	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359
ES.23286.14	chr4	-	5136	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	24.5777565229717	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	6	True	NA	-5	True	AATAAA	-21	NA	44167934	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158989_44159053_44167626
ES.23286.15	chr4	-	4840	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.5878285808973	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	8	True	NA	-5	True	AATAAA	-21	NA	44167990	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152519_44167880
ES.23286.16	chr4	-	4643	10	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	29.2384830127845	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	1710	False	NA	-5	True	AATAAA	-21	NA	44167557	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44152359_44152554_44167465
ES.23286.17	chr4	-	5244	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-161	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	26.04636679348	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	NA	False	NA	-5	True	AATAAA	-21	NA	44233950	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44187448_44187520_44233542
ES.23286.18	chr4	-	5161	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	24.3	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	9	True	NA	-5	True	AATAAA	-21	NA	44168034	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149227_44152359_44152554_44167626
ES.23286.19	chr4	-	4904	11	NNC	ENSMUSG00000035696.16	novel	5061	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	24.8839305576912	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	1700	False	NA	-5	True	AATAAA	-21	NA	44167567	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
ES.23286.2	chr4	-	4866	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.5194897127397	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTTTCATGTAAGGCG	12	True	NA	0	True	AATAAA	-26	NA	44167624	44126209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167465
ES.23286.20	chr4	-	4398	7	FSM	ENSMUSG00000035696.16	ENSMUST00000145378.2	840	7	-265	-3293	-185	0	multi-exon	FALSE	canonical	1	1	junction_6	27.7768888746662	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	9244	False	NA	-5	True	AATAAA	-21	NA	44139851	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44139471
ES.23286.21	chr4	-	5051	11	FSM	ENSMUSG00000035696.16	ENSMUST00000098098.9	5061	11	5	5	5	0	multi-exon	FALSE	canonical	2	7	junction_10	20.7749849578766	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	-9	True	NA	-5	True	AATAAA	-21	NA	44167603	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
ES.23286.22	chr4	-	4891	11	NIC	ENSMUSG00000035696.16	novel	5012	12	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	22.5878285808973	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	-5	True	NA	-5	True	AATAAA	-21	NA	44168368	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44168242
ES.23286.23	chr4	-	7685	10	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	6	0	intron_retention	FALSE	canonical	1	4	junction_9	26.4533131720353	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	24	True	NA	-5	True	AATAAA	-21	NA	44167916	44126214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167465
ES.23286.25	chr4	-	5450	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	25.470125102309	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAAGTCGTGTTTCATG	-16	True	NA	-7	True	AATAAA	-19	NA	44167956	44126216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167317
ES.23286.26	chr4	-	5176	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	25.3178145884907	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAAGTCGTGTTTCATG	14	True	NA	-7	True	AATAAA	-19	NA	44167580	44126216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167317
ES.23286.27	chr4	-	4931	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-108	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.3178145884907	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	1154	False	NA	-8	True	AATAAA	-18	NA	44168113	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44168094
ES.23286.28	chr4	-	5334	11	NNC	ENSMUSG00000035696.16	novel	5061	11	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.328556493163	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	1	True	NA	-8	True	AATAAA	-18	NA	44167893	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131636_44133635_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
ES.23286.29	chr4	-	4696	11	NNC	ENSMUSG00000035696.16	novel	5012	12	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.1360978104641	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	2	True	NA	-8	True	AATAAA	-18	NA	44168276	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149139_44152359_44152554_44168242
ES.23286.3	chr4	-	4992	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	21.7349948240159	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTGTTTCATGTAAGG	-21	True	NA	-2	True	AATAAA	-24	NA	44167961	44126211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.30	chr4	-	5133	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-115	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	26.8	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	1147	False	NA	-8	True	AATAAA	-18	NA	44168120	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149227_44152359_44152554_44167626
ES.23286.31	chr4	-	4918	13	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	201	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.9687331445474	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	327	False	NA	-8	True	AATAAA	-18	NA	44233588	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138780_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44187448_44187520_44233542
ES.23286.32	chr4	-	5206	13	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.5174167055075	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	-12	True	NA	-8	True	AATAAA	-18	NA	44167952	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158816_44158872_44158989_44159053_44167626
ES.23286.33	chr4	-	5244	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	26.4968421633239	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	-7	True	NA	-8	True	AATAAA	-18	NA	44168050	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137674_44138773_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
ES.23286.34	chr4	-	4829	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-108	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.470125102309	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	1154	False	NA	-8	True	AATAAA	-18	NA	44168113	44126217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44168094
ES.23286.35	chr4	-	4915	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-22	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	26.9403994767513	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACCTAAGTCGTGTTTC	1710	False	NA	-10	True	AATAAA	-16	NA	44167557	44126219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158989_44159053_44167465
ES.23286.36	chr4	-	4929	11	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	3	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	29.2282397691	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTCAAACCTAAGTCGT	21	True	NA	-15	True	AATAAA	-11	NA	44167919	44126224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138836_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167626
ES.23286.37	chr4	-	4933	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-12	-140	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTTGTACATTTTT	6	True	NA	NA	False	TATAAA	-41	NA	44167934	44126354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.38	chr4	-	3226	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	1	1371	combination_of_known_junctions	FALSE	canonical	3	27	junction_10	15.9874951133691	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTGTTTGAGGTCATT	19	True	NA	NA	False	CATAAA	-1	NA	44167921	44128048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.39	chr4	-	3283	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-11	1368	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	22.9112553090116	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGATTGTTTGAGGTC	7	True	NA	NA	False	TTTAAA	-19	NA	44167933	44128051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167626
ES.23286.4	chr4	-	5292	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-97	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	22.9112553090116	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTGTTTCATGTAAGG	1165	False	NA	-2	True	AATAAA	-24	NA	44168102	44126211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44159004_44159053_44167626
ES.23286.40	chr4	-	3532	12	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	3	1368	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	25.3178145884907	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGATTGTTTGAGGTC	21	True	NA	NA	False	TTTAAA	-19	NA	44167919	44128051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167465
ES.23286.41	chr4	-	3358	14	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-131	1286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.2047811511596	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAACTGACCTTTATTGA	-5	True	NA	NA	False	TATAAA	-18	NA	44233920	44128133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44143787_44143803_44149024_44149239_44152359_44152554_44159004_44159053_44187448_44187520_44233542
ES.23286.42	chr4	-	2728	10	ISM	ENSMUSG00000035696.16	ENSMUST00000107836.8	1694	12	6451	-1229	6451	1229	3prime_fragment	FALSE	canonical	3	42	junction_6	11.5223882983853	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTGCAGTGTAAATGA	1497	False	NA	NA	False	AATACA	-13	NA	44152492	44128190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359
ES.23286.43	chr4	-	2677	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-112	944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.3178145884907	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGCCTGGTTTCTGGT	1150	False	NA	NA	False	NA	NA	NA	44168117	44128475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44168094
ES.23286.44	chr4	-	2020	12	NNC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	27.2796960793521	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGATTGTTATACTAACT	9	True	NA	NA	False	TATAAA	-25	NA	44168034	44129417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149139_44152359_44152554_44158902_44159053_44167626
ES.23286.45	chr4	-	3798	6	FSM	ENSMUSG00000035696.16	ENSMUST00000148869.8	848	6	-2876	-74	-2162	-8	multi-exon	FALSE	canonical	3	65	junction_2	7.22772439983706	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCACAATTATGGGA	7267	False	NA	NA	False	TATAAA	-11	NA	44141828	44129431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669
ES.23286.46	chr4	-	174	1	Intergenic	novelGene_19114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	44213551	44213377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44213400_44213600
ES.23286.5	chr4	-	6070	10	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	27	junction_9	15.6204993518133	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTGTTTCATGTAAGG	20	True	NA	-2	True	AATAAA	-24	NA	44167920	44126211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.7	chr4	-	8559	10	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-4	2	intron_retention	FALSE	canonical	3	27	junction_9	15.3172218091473	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	-15	True	NA	-3	True	AATAAA	-23	NA	44167955	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167626
ES.23286.8	chr4	-	5405	11	NIC	ENSMUSG00000035696.16	novel	5240	12	NA	NA	-98	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_10	21.5455331797568	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	1164	False	NA	-3	True	AATAAA	-23	NA	44168103	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167465
ES.23286.9	chr4	-	5365	12	FSM	ENSMUSG00000035696.16	ENSMUST00000102934.9	5240	12	-123	-2	-69	2	multi-exon	FALSE	canonical	3	13	junction_10	22.7367253069995	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCGTGTTTCATGTAAG	1193	False	NA	-3	True	AATAAA	-23	NA	44168074	44126212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
ES.23287.1	chr4	+	1604	2	Intergenic	novelGene_19116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATATAAATGAAAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44234031	44237132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44234926_44236422
ES.23288.1	chr4	+	161	1	Intergenic	novelGene_19117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	44246737	44246898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44246700_44246900
ES.23289.1	chr4	-	184	1	Intergenic	novelGene_19118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTACTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	44248512	44248328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44248300_44248500
ES.2329.1	chr10	+	209	1	Intergenic	novelGene_1775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGAATAATCTT	NA	False	NA	NA	False	CATAAA	-10	NA	12318127	12318336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12318100_12318300
ES.23290.1	chr4	+	186	1	Intergenic	novelGene_19119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCATTGAAGGATTTGTA	NA	False	NA	NA	False	NA	NA	NA	44262029	44262215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44262000_44262200
ES.23291.1	chr4	-	177	1	Intergenic	novelGene_19120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGAGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	44280077	44279900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44279900_44280100
ES.23292.1	chr4	-	175	1	Intergenic	novelGene_19121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44284864	44284689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44284700_44284900
ES.23293.1	chr4	-	196	1	Intergenic	novelGene_19122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACATATAAATACTACAAA	NA	False	NA	NA	False	AATAAA	-5	NA	44289166	44288970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44289000_44289200
ES.23294.1	chr4	+	2627	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	1	327	1	-327	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGATAAGAATTCAT	NA	False	NA	78	True	NA	NA	NA	44300876	44364348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.10	chr4	+	2519	18	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	41	-392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	109.85725245497	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGACTGTTAAGTAGAGA	-3	True	NA	13	True	AATAAA	-14	NA	44300916	44364283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344922_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.11	chr4	+	2715	18	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	44	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	112.816935340639	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGTCCAGTCAACAAT	0	True	NA	NA	False	AATAAA	-18	NA	44300919	44364494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360886_44360976_44363709
ES.23294.12	chr4	+	2809	17	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	49	7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	116.061675414411	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTGGTCAGT	5	True	NA	NA	False	ATTAAA	-18	NA	44300924	44364682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44363709
ES.23294.13	chr4	+	2408	17	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	50	-393	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	116.061675414411	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGACTGTTAAGTAGAG	6	True	NA	12	True	AATAAA	-13	NA	44300925	44364282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44363709
ES.23294.15	chr4	+	6096	14	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	51	-375	intron_retention	FALSE	canonical	2	9	junction_8	127.832823520529	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATTTGGAGTGTGTTT	7	True	NA	30	True	AATAAA	-31	NA	44300926	44364300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44351111_44360871
ES.23294.16	chr4	+	1725	14	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	70	17144	70	-17144	5prime_fragment	FALSE	canonical	2	288	junction_12	55.0859468327589	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTGCTCTTTCTTTCTT	-26	True	NA	NA	False	ACTAAA	-13	NA	44300945	44347531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123
ES.23294.17	chr4	+	2489	18	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	71	-393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.232303573427	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGACTGTTAAGTAGAG	-25	True	NA	12	True	AATAAA	-13	NA	44300946	44364282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307111_44308911_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.2	chr4	+	2064	13	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	18	-387	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	129.513405569548	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTAAGTAGAGACTATT	NA	False	NA	18	True	AATAAA	-19	NA	44300893	44364288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.20	chr4	+	2681	20	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	74	-378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	165.924940477844	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGACTATTTGGAGTGTG	-22	True	NA	27	True	AATAAA	-28	NA	44300949	44364297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44329487_44329606_44331588_44331649_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.21	chr4	+	2559	19	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	75	-381	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	144.565718320701	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGACTATTTGGAGT	-21	True	NA	24	True	AATAAA	-25	NA	44300950	44364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44337991_44338052_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.24	chr4	+	2714	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	80	7	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTGGTCAGT	-16	True	NA	NA	False	ATTAAA	-18	NA	44300955	44364682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.25	chr4	+	2947	1	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	81	-14167	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGCTCTCTTGCTCTC	-15	True	NA	NA	False	NA	NA	NA	44300956	44303903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301000_44303900
ES.23294.27	chr4	+	2666	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	103	186	103	-186	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAAGTATGTCCAGTCA	7	True	NA	NA	False	AATAAA	-13	NA	44300978	44364489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.28	chr4	+	2257	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	108	-383	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	116.606956148517	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGAGACTATTTGGA	12	True	NA	22	True	AATAAA	-23	NA	44300983	44364292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.29	chr4	+	2287	16	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	2461	-377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.762005234151	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTATTTGGAGTGTGT	5057	False	NA	28	True	AATAAA	-29	NA	44306028	44364298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44306118_44306989_44307105_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350940_44351111_44360871_44360976_44363709
ES.23294.3	chr4	+	2944	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	18	-7	18	7	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTGGTCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	44300893	44364682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.30	chr4	+	2196	15	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	6113	381	3421	-381	3prime_fragment	FALSE	canonical	2	288	junction_9	48.8859564158653	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGACTATTTGGAGT	6017	False	NA	24	True	AATAAA	-25	NA	44306988	44364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.31	chr4	+	5602	13	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	3506	-379	intron_retention	FALSE	canonical	2	288	junction_9	52.6547322976134	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGACTATTTGGAGTGT	6102	False	NA	26	True	AATAAA	-27	NA	44307073	44364296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44351111_44360871_44360976_44363709
ES.23294.32	chr4	+	4432	8	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	21345	-381	intron_retention	FALSE	canonical	2	288	junction_3	55.1228683238173	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGACTATTTGGAGT	NA	False	NA	24	True	AATAAA	-25	NA	44324912	44364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44325740_44332879_44332967_44340625_44340746_44344912_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.4	chr4	+	2986	19	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	169.089026153184	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGAAAAAAATAGCACTG	NA	False	NA	NA	False	ATTAAA	-6	NA	44300894	44364670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44337991_44338052_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350946_44351111_44360871_44360976_44363709
ES.23294.6	chr4	+	4301	17	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	33	7	intron_retention	FALSE	canonical	2	288	junction_11	50.0287026990507	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTGGTCAGT	-11	True	NA	NA	False	ATTAAA	-18	NA	44300908	44364682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.7	chr4	+	2382	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	34	-371	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGTGTGTTTTATC	-10	True	NA	34	True	AATAAA	-35	NA	44300909	44364304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23294.8	chr4	+	2874	18	NNC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	146.482281602689	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGCACTGTTTCT	-4	True	NA	NA	False	ATTAAA	-11	NA	44300915	44364675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308947_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350940_44351111_44360871_44360976_44363709
ES.23294.9	chr4	+	2464	17	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	41	-381	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	115.912126603518	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGACTATTTGGAGT	-3	True	NA	24	True	AATAAA	-25	NA	44300916	44364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ES.23295.1	chr4	-	1102	1	Antisense	novelGene_ENSMUSG00000035683.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAAGCAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	44309119	44308017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_44308000_44309100
ES.23296.1	chr4	-	180	1	Intergenic	novelGene_19123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	44370192	44370012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44370000_44370200
ES.23297.1	chr4	+	174	1	Intergenic	novelGene_19124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	44382706	44382880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44382700_44382900
ES.23298.1	chr4	-	611	1	Intergenic	novelGene_19125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	44385637	44385026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44385000_44385600
ES.23299.1	chr4	-	172	1	Intergenic	novelGene_19126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	44423848	44423676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44423700_44423800
ES.233.1	chr1	+	167	1	Antisense	novelGene_ENSMUSG00000042182.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTTAAAGATTTTATT	414	False	NA	NA	False	NA	NA	NA	33922886	33923053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_33922900_33923100
ES.2330.1	chr10	+	2764	1	Antisense	novelGene_ENSMUSG00000019820.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12331157	12333921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_12331200_12333900
ES.23300.1	chr4	+	175	1	Intergenic	novelGene_19127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGCAGCTGTTGGAA	NA	False	NA	NA	False	NA	NA	NA	44554748	44554923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44554700_44554900
ES.23301.1	chr4	-	1043	1	FSM	ENSMUSG00000080916.4	ENSMUST00000118271.2	849	1	-69	-125	-69	125	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	44753194	44752151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44752200_44753200
ES.23302.1	chr4	+	2554	9	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.4255996272056	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	44756534	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762479_44893530_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
ES.23302.11	chr4	+	2786	12	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.2003034598445	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	19	True	NA	NA	False	AATAAA	-26	NA	44756664	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762475_44893532_44893571_44894136_44894296_44894915_44895042_44895818_44895990_44908450_44908487_44916183_44916313_44924187_44924268_44925974_44926071_44929117_44929236_44931035
ES.23302.13	chr4	+	2355	9	NIC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	1506	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	43.084038517762	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	5258	False	NA	NA	False	AATAAA	-26	NA	44761949	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44929580_44929646_44931035
ES.23302.14	chr4	+	177	1	Intergenic	novelGene_19129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTCATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44861887	44862064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44861900_44862100
ES.23302.15	chr4	+	231	1	Intergenic	novelGene_19131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAGCTACATGTCTCAA	1664	False	NA	NA	False	AATAAA	-5	NA	44886605	44886836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_44886600_44886800
ES.23302.16	chr4	+	3154	4	NNC	ENSMUSG00000035649.18	novel	4251	3	NA	NA	7351	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	57.913728942281	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	44914552	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44916313_44925974_44926071_44929117_44929236_44931035
ES.23302.17	chr4	+	2473	5	NNC	ENSMUSG00000035649.18	novel	586	4	NA	NA	-7837	-6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	61.0056349856306	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATGTGTAAATAAATG	NA	False	NA	NA	False	AATAAA	-8	NA	44915280	44932197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44916313_44925974_44926071_44929117_44929236_44929580_44929646_44931035
ES.23302.18	chr4	+	8839	3	FSM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	-4588	0	-4588	0	multi-exon	FALSE	canonical	3	133	junction_2	10.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	44918529	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44926071_44929117_44929236_44931035
ES.23302.19	chr4	+	6048	4	NNC	ENSMUSG00000035649.18	novel	586	4	NA	NA	-2150	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1876495822781	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTAAATAAATGTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	44920967	44932202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44921676_44922015_44926071_44929117_44929236_44931035
ES.23302.20	chr4	+	2161	4	NNC	ENSMUSG00000035649.18	novel	586	4	NA	NA	-1863	728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1876495822781	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAACATGAATTTATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	44921254	44932943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44921294_44925974_44926071_44929117_44929236_44931035
ES.23302.5	chr4	+	2745	11	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.252707245569	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	-16	True	NA	NA	False	AATAAA	-26	NA	44756629	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762475_44893532_44893571_44894136_44894296_44894915_44895042_44895818_44895990_44908450_44908487_44916179_44916313_44925974_44926071_44929117_44929236_44931035
ES.23302.6	chr4	+	2435	9	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.4255996272056	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	-7	True	NA	NA	False	AATAAA	-26	NA	44756638	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762466_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
ES.23302.7	chr4	+	2737	12	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.3177668176116	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	-7	True	NA	NA	False	AATAAA	-26	NA	44756638	44932215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44916179_44916313_44924172_44924268_44925974_44926071_44929117_44929236_44929580_44929646_44931035
ES.23302.9	chr4	+	2552	10	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	47.9026791178392	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTGTTTATTGTT	11	True	NA	NA	False	AATAAA	-19	NA	44756656	44932208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44916179_44916313_44925974_44926071_44929117_44929236_44931035
ES.23303.1	chr4	-	1574	1	Intergenic	novelGene_19128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGAATAGTATGATAATA	NA	False	NA	NA	False	NA	NA	NA	44769897	44768323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44768300_44769900
ES.23304.1	chr4	-	3215	1	Antisense	novelGene_ENSMUSG00002076239.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGGTGAAATAAATACTA	NA	False	NA	NA	False	NA	NA	NA	44868475	44865260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_44865300_44868500
ES.23305.1	chr4	-	2743	1	Intergenic	novelGene_19130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTCAGGAAAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	44882723	44879980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44880000_44882700
ES.23306.1	chr4	-	184	1	Intergenic	novelGene_19132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTCCAGCTACAGAGA	NA	False	NA	0	True	NA	NA	NA	44946297	44946113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44946100_44946300
ES.23307.1	chr4	-	1051	4	Intergenic	novelGene_19133	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44959323	44956331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_44957139_44957353_44957431_44957834_44957903_44959224
ES.23308.1	chr4	+	1245	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	2	33	2	-33	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	-29	True	NA	15	True	ATTAAA	-18	NA	44981396	44990701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ES.23308.10	chr4	+	1992	6	NIC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	1839	-35	intron_retention	FALSE	canonical	3	317	junction_3	25.4950975679639	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGCCTATGACTTGG	1857	False	NA	13	True	ATTAAA	-16	NA	44983338	44990699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ES.23308.11	chr4	+	700	4	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	4888	33	4783	-33	3prime_fragment	FALSE	canonical	3	317	junction_1	28.6860399652669	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	4801	False	NA	15	True	ATTAAA	-18	NA	44986282	44990701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_44986391_44987215_44987352_44988919_44989051_44990376
ES.23308.12	chr4	+	1521	1	FSM	ENSMUSG00000070997.5	ENSMUST00000095105.2	1570	1	-6	55	-6	-55	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAGAACACTTATATG	4	True	NA	NA	False	AATAAA	-8	NA	45012823	45014344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45012800_45014300
ES.23308.13	chr4	+	2931	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	55	0	-24	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	-10	True	NA	33	True	ATTAAA	-15	NA	45018637	45033692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.14	chr4	+	3573	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	56	-643	-23	643	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCATTTTTATACAGCG	-9	True	NA	NA	False	NA	NA	NA	45018638	45034335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.15	chr4	+	1592	12	NNC	ENSMUSG00000028318.15	novel	2986	12	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.9277140912485	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTCCTTTCATGTTG	-8	True	NA	18	True	ATTAAA	-23	NA	45018639	45032364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030761_45030835_45031366_45031499_45031940
ES.23308.16	chr4	+	1348	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	57	1581	-22	-1	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTTCTGTTCACTTCC	-8	True	NA	NA	False	AATGAA	-16	NA	45018639	45032111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.17	chr4	+	2880	12	NNC	ENSMUSG00000028318.15	novel	2986	12	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	53.1436537498533	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	-6	True	NA	33	True	ATTAAA	-15	NA	45018641	45033692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45018746_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.18	chr4	+	3365	11	ISM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	63	0	-16	0	intron_retention	FALSE	canonical	3	141	junction_4	17.2162713733259	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	-2	True	NA	33	True	ATTAAA	-15	NA	45018645	45033692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366
ES.23308.19	chr4	+	1594	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	64	1328	-15	-1	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTCCTTTCATGTTG	-1	True	NA	18	True	ATTAAA	-23	NA	45018646	45032364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.2	chr4	+	1322	10	NNC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	1	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.462205396196	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGCCTATGACTTGG	-22	True	NA	13	True	ATTAAA	-16	NA	44981403	44990699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44981535_44982878_44983010_44983873_44983947_44984160_44984247_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ES.23308.20	chr4	+	2827	11	NIC	ENSMUSG00000028318.15	novel	2986	12	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	141	junction_4	17.3608755539575	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATCTCCCTCCTTTCA	-1	True	NA	13	True	ATTAAA	-18	NA	45018646	45032359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.21	chr4	+	2107	11	NIC	ENSMUSG00000028318.15	novel	2986	12	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	141	junction_4	17.0824471314856	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGACTTCATCTCCCT	5	True	NA	6	True	ATTAAA	-11	NA	45018652	45032352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.22	chr4	+	2948	12	NNC	ENSMUSG00000028318.15	novel	2986	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2432537603746	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	5	True	NA	33	True	ATTAAA	-15	NA	45018652	45033692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45018825_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.24	chr4	+	4629	1	Genic_Genomic	ENSMUSG00000028318.15	novel	NA	NA	NA	NA	2620	1945	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTTGGAATGTCATTA	NA	False	NA	NA	False	NA	NA	NA	45033881	45038510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_45033900_45038500
ES.23308.3	chr4	+	2109	19	Fusion	ENSMUSG00000028318.15_ENSMUSG00000035637.15	novel	1235	11	NA	NA	3	2	multi-exon	FALSE	canonical	0	0	junction_8	92.2568208191368	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTGTTCACTTCCATT	-20	True	NA	NA	False	AATGAA	-19	NA	44981405	45032114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ES.23308.4	chr4	+	1362	9	NNC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	4	-35	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	112.497708309992	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGCCTATGACTTGG	-19	True	NA	13	True	ATTAAA	-16	NA	44981406	44990699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990247
ES.23308.5	chr4	+	2085	8	NIC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	4	-8	intron_retention	FALSE	canonical	3	277	junction_3	35.5837614879688	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAGCATCTTTTGTGT	-19	True	NA	5	True	ATTAAA	-43	NA	44981406	44990726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44987352_44988919_44989051_44990376
ES.23308.6	chr4	+	2644	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	12	-1376	4	1376	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAATTCTTGTCCAT	-19	True	NA	NA	False	AAAAAG	-3	NA	44981406	44992110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ES.23308.7	chr4	+	4126	7	ISM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	12	36	4	-36	intron_retention	FALSE	canonical	3	277	junction_3	27.7608837515427	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGGCCTATGACTTG	-19	True	NA	12	True	ATTAAA	-15	NA	44981406	44990698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215
ES.23308.8	chr4	+	2792	8	NIC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	7	-41	intron_retention	FALSE	canonical	3	277	junction_3	27.0388986613051	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGTCTGGGCCTATG	-16	True	NA	7	True	ATTAAA	-10	NA	44981409	44990693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44989051_44990376
ES.23308.9	chr4	+	3054	7	NIC	ENSMUSG00000035637.15	novel	1280	9	NA	NA	12	-33	intron_retention	FALSE	canonical	3	289	junction_1	31.5105802337353	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTATGACTTGGGG	-11	True	NA	15	True	ATTAAA	-18	NA	44981414	44990701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_44983010_44983873_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ES.23309.1	chr4	+	176	1	Intergenic	novelGene_19135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACAGCGAGCGCAGTT	NA	False	NA	NA	False	NA	NA	NA	45042647	45042823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45042600_45042800
ES.2331.1	chr10	+	1974	1	Intergenic	novelGene_1778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12536687	12538661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12536700_12538700
ES.23310.1	chr4	-	5436	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	170	-1739	-97	0	multi-exon	FALSE	canonical	3	12	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGTCTCCTTTGCTTC	64	False	NA	0	True	ATTAAA	-26	NA	45012242	44991241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44995387_45010951
ES.23310.2	chr4	-	4467	2	FSM	ENSMUSG00000049657.10	ENSMUST00000180217.2	4708	2	244	-3	-23	0	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGTCTCCTTTGCTTC	138	False	NA	0	True	ATTAAA	-26	NA	45012168	44991241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44995387_45011846
ES.23310.3	chr4	-	4374	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-58	0	-40	0	multi-exon	FALSE	canonical	3	11	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGTCTCCTTTGCTTC	NA	False	NA	0	True	ATTAAA	-26	NA	45012452	44991241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44995387_45012223
ES.23310.4	chr4	-	3582	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	285	0	18	0	multi-exon	FALSE	canonical	3	12	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGGAGGACAAGCATG	-1	True	NA	NA	False	NA	NA	NA	45012127	44992980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44995387_45010951
ES.23310.5	chr4	-	2616	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	-39	1739	-21	0	multi-exon	FALSE	canonical	3	11	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGGAGGACAAGCATG	NA	False	NA	NA	False	NA	NA	NA	45012433	44992980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_44995387_45012223
ES.23310.6	chr4	-	787	1	NIC	ENSMUSG00000049657.10	novel	4708	2	NA	NA	21	-16524	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAAAACATTTCCAA	2	True	NA	NA	False	AATAAA	-20	NA	45012124	45011337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_45011300_45012100
ES.23311.1	chr4	-	176	1	Intergenic	novelGene_19134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATATACCTATA	NA	False	NA	NA	False	NA	NA	NA	45023829	45023653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45023700_45023800
ES.23312.1	chr4	-	4643	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	-9	1	-9	0	multi-exon	FALSE	canonical	3	26	junction_8	5.25737577123797	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTGGGGTCATAAT	NA	False	NA	-1	True	AATAAA	-19	NA	45084613	45034247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
ES.23312.2	chr4	-	7810	8	NIC	ENSMUSG00000048232.13	novel	3231	10	NA	NA	28	-1	intron_retention	FALSE	canonical	3	26	junction_7	5.22943006220661	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTTCTGGGGTCATAA	NA	False	NA	-2	True	AATAAA	-18	NA	45058590	45034248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328
ES.23312.4	chr4	-	4667	11	NNC	ENSMUSG00000048232.13	novel	4635	11	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.3331372532058	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTTCTGGGGTCAT	-10	True	NA	-4	True	AATAAA	-16	NA	45084580	45034250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044929_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
ES.23312.6	chr4	-	4825	12	NNC	ENSMUSG00000048232.13	novel	4635	11	NA	NA	45	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.7978319053849	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGGTGCTTCTGGGGT	11	True	NA	-7	True	AATAAA	-13	NA	45084559	45034253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45067794_45068037_45084489
ES.23312.7	chr4	-	176	1	Intergenic	novelGene_19136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAGACAGTG	NA	False	NA	NA	False	NA	NA	NA	45054061	45053885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45053900_45054100
ES.23312.8	chr4	-	1050	1	Genic_Genomic	ENSMUSG00000048232.13	novel	NA	NA	NA	NA	-4	-37271	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45084608	45083558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_45083600_45084600
ES.23313.1	chr4	+	3530	1	Antisense	novelGene_ENSMUSG00000078713.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGAGATCCACCTACCT	NA	False	NA	NA	False	NA	NA	NA	45103290	45106820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_45103300_45106800
ES.23314.1	chr4	-	664	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	-29	4	-29	0	multi-exon	FALSE	canonical	3	2176	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	45108143	45105211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45105645_45107912
ES.23314.3	chr4	-	2915	1	Genic_Genomic	ENSMUSG00000078713.9	novel	NA	NA	NA	NA	-15	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGCGTGGTTTTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	45108129	45105214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_45105200_45108100
ES.23314.5	chr4	-	667	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	7	5	7	-5	multi-exon	FALSE	canonical	3	56	junction_2	2	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGCGTGGTTTTGT	-3	True	NA	NA	False	AATAAA	-9	NA	45108101	45105216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45105645_45106838_45106889_45107912
ES.23315.1	chr4	-	165	1	Intergenic	novelGene_19137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	45170760	45170595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45170600_45170800
ES.23316.1	chr4	-	171	1	Intergenic	novelGene_19138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	45175533	45175362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45175400_45175500
ES.23317.1	chr4	+	5006	16	FSM	ENSMUSG00000035615.13	ENSMUST00000044773.12	4812	16	-194	0	-163	0	multi-exon	TRUE	canonical	0	0	junction_4	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTGCCTTTCGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	45184711	45285936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45184958_45229830_45229936_45243629_45243788_45244571_45244675_45249173_45249220_45256841_45256950_45261832_45261929_45268468_45268595_45269899_45270020_45271129_45271267_45273077_45273205_45273358_45273455_45274311_45274495_45275249_45275398_45278825_45279642_45283545
ES.23317.2	chr4	+	4768	15	ISM	ENSMUSG00000035615.13	ENSMUST00000107804.2	5241	16	25898	0	25898	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.66751678998982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTGCCTTTCGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	45229822	45285936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45229936_45243629_45243788_45244571_45244675_45249173_45249220_45256841_45256950_45261832_45261929_45268468_45268595_45269899_45270020_45271129_45271267_45273077_45273205_45273358_45273455_45274311_45274495_45275249_45275398_45278825_45279642_45283545
ES.23318.1	chr4	-	182	1	Intergenic	novelGene_19139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGCGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	45262677	45262495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45262500_45262700
ES.23319.1	chr4	+	1416	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	3	645	3	344	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCCGATTTCCACCA	NA	False	NA	9	True	CATAAA	-18	NA	45297129	45315486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.10	chr4	+	1216	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	4	182	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	90.2966465324156	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTTGTGTTAA	-4	True	NA	-51	True	GATAAA	-15	NA	45297158	45315324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.11	chr4	+	1387	9	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	4	297	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	97.061755470422	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGAACTTTTCATTTAA	-4	True	NA	10	True	TTTAAA	-15	NA	45297158	45315439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308449_45308565_45314282_45314407_45315011
ES.23319.12	chr4	+	4944	7	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	4	1730	intron_retention	FALSE	non_canonical	0	0	junction_5	124.763331507654	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACACGTGTGTGGTCCTG	-4	True	NA	NA	False	AATAAA	-16	NA	45297158	45310451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45306628_45306802_45309978_45310054
ES.23319.13	chr4	+	5501	7	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	5	191	intron_retention	FALSE	canonical	3	203	junction_1	45.7772384002744	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTTAAGTAATTGCC	-3	True	NA	-42	True	GATAAA	-24	NA	45297159	45315333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45297196_45300416_45300628_45301235_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.14	chr4	+	1376	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	6	344	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	90.2966465324156	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCCGATTTCCACCA	-2	True	NA	9	True	CATAAA	-18	NA	45297160	45315486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.15	chr4	+	1256	8	ISM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	3275	754	-12	235	3prime_fragment	FALSE	canonical	3	233	junction_5	34.2332932588575	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGCTTTGTACATTC	3239	False	NA	2	True	AATACA	-17	NA	45300401	45315377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.16	chr4	+	5059	4	NNC	ENSMUSG00000035601.10	novel	346	2	NA	NA	-5183	191	intron_retention	TRUE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTTAAGTAATTGCC	NA	False	NA	-42	True	GATAAA	-24	NA	45308914	45315333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45309978_45310065_45311967_45312496_45313167_45313908
ES.23319.17	chr4	+	4318	4	NNC	ENSMUSG00000035601.10	novel	346	2	NA	NA	-4387	235	intron_retention	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGCTTTGTACATTC	NA	False	NA	2	True	AATACA	-17	NA	45309710	45315377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45309978_45310054_45311967_45312496_45313167_45313908
ES.23319.2	chr4	+	1254	8	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	344	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	126.24676193059	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCCGATTTCCACCA	-5	True	NA	9	True	CATAAA	-18	NA	45297157	45315486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.3	chr4	+	2650	7	ISM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	31	5706	3	1704	5prime_fragment	FALSE	canonical	3	203	junction_1	40.2809577288767	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATAAAACACAGTTA	-5	True	NA	NA	False	ACTAAA	-39	NA	45297157	45310425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496
ES.23319.4	chr4	+	1363	10	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.784268454848	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTTGTGTTAA	-5	True	NA	-51	True	GATAAA	-15	NA	45297157	45315324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297187_45299751_45299898_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.5	chr4	+	1279	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	31	754	3	235	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGCTTTGTACATTC	-5	True	NA	2	True	AATACA	-17	NA	45297157	45315377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.6	chr4	+	2990	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	31	-957	3	957	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTCCTTTTCTGGAAT	-5	True	NA	NA	False	AATAAA	-24	NA	45297157	45317088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.23319.7	chr4	+	1307	8	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	102.852777685151	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTGCCGATTTCCAC	-5	True	NA	7	True	CATAAA	-16	NA	45297157	45315484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45308496_45308565_45314282_45314407_45315011
ES.23319.8	chr4	+	3037	9	NIC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	3	957	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	97.061755470422	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTCCTTTTCTGGAAT	-5	True	NA	NA	False	AATAAA	-24	NA	45297157	45317088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308449_45308565_45314282_45314407_45315011
ES.23319.9	chr4	+	1101	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	4	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3223917351974	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATGTCATTCTGGG	-4	True	NA	-22	True	GATAAA	-44	NA	45297158	45315353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_45297191_45300564_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ES.2332.1	chr10	+	182	1	Intergenic	novelGene_1779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	12554807	12554989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12554800_12555000
ES.23320.1	chr4	-	4417	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	2	-3342	2	3342	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	-20	True	NA	NA	False	NA	NA	NA	45320627	45313270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
ES.23320.2	chr4	-	3925	5	NNC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	1	3342	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	240.031638539589	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	4	True	NA	NA	False	NA	NA	NA	45320603	45313270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45314218_45314685_45317029_45317677_45317830_45319549_45319700_45320270
ES.23320.3	chr4	-	1058	3	NIC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	-10	146	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	240.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCAGTGGAAGAGTAC	-7	True	NA	NA	False	AATAAA	-16	NA	45320614	45316466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_45317029_45317677_45317830_45320270
ES.23320.4	chr4	-	1085	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	-7	-1	-7	1	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGTAGTTCTACAGTA	NA	False	NA	0	True	AATAAA	-18	NA	45320636	45316611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
ES.23320.5	chr4	-	828	4	NNC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	209.085309542939	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	NA	False	NA	-1	True	AATAAA	-17	NA	45320635	45316612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45317029_45317677_45317830_45319549_45319700_45320525
ES.23321.1	chr4	+	7272	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-33	11	-33	-11	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTCACGAATCCAGAATG	-31	True	NA	39	True	NA	NA	NA	45342067	45379748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.10	chr4	+	7277	8	FSM	ENSMUSG00000035572.17	ENSMUST00000107798.4	2421	8	-81	-4775	0	-28	multi-exon	FALSE	canonical	3	9	junction_3	29.3250606763817	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGTGTGGCCTCAAGTT	2	True	NA	22	True	NA	NA	NA	45342100	45379731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45349536_45349592_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.11	chr4	+	2231	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	1	-17	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTTAAGATCTCCAGC	3	True	NA	NA	False	NA	NA	NA	45342101	45374939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.12	chr4	+	5776	6	ISM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	14	2299	-5	1793	intron_retention	FALSE	canonical	3	56	junction_4	13.4461890511773	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTATGTGAT	16	True	NA	NA	False	AATAAA	-27	NA	45342114	45377460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923
ES.23321.13	chr4	+	4745	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	-2	1802	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGTGATCACAATTCG	19	True	NA	NA	False	AATAAA	-36	NA	45342117	45377469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.14	chr4	+	3803	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	19	3428	0	664	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAGAAGATTCCATAAA	21	True	NA	NA	False	ATTAAA	-29	NA	45342119	45376331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.15	chr4	+	1750	4	ISM	ENSMUSG00000035572.17	ENSMUST00000107798.4	2421	8	-60	14221	2	-9744	5prime_fragment	FALSE	canonical	3	9	junction_3	38.4389848403357	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCCTAAGTGTAGGGAAA	23	True	NA	NA	False	AATAAA	-21	NA	45342121	45360735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45342728_45348105_45348220_45349536_45349592_45359760
ES.23321.16	chr4	+	4928	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	23	2299	4	1793	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTATGTGAT	25	True	NA	NA	False	AATAAA	-27	NA	45342123	45377460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.2	chr4	+	4673	1	Genic_Genomic	ENSMUSG00000035572.17	novel	NA	NA	NA	NA	-22	-23728	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAACAACA	-20	True	NA	NA	False	NA	NA	NA	45342078	45346751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_45342100_45346800
ES.23321.3	chr4	+	7058	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	-19	-13	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCTCACGAATCCAGAA	-17	True	NA	37	True	NA	NA	NA	45342081	45379746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.4	chr4	+	2449	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-17	4818	-17	-15	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAGATCTCCAGCGT	-15	True	NA	NA	False	NA	NA	NA	45342083	45374941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.5	chr4	+	5936	5	ISM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-13	2315	-13	1777	intron_retention	FALSE	canonical	3	56	junction_4	14.8660687473185	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTTCTACTTTAAAA	-11	True	NA	NA	False	AATAAA	-11	NA	45342087	45377444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663
ES.23321.6	chr4	+	2207	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-4	5047	-4	-244	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGTGATTGAAAAAGTTC	-2	True	NA	11	True	AATAAA	-24	NA	45342096	45374712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.7	chr4	+	6881	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	-4	373	-4	-373	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATCTGGTCCCAATCTG	-2	True	NA	NA	False	AATAAA	-15	NA	45342096	45379386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23321.8	chr4	+	4993	8	FSM	ENSMUSG00000035572.17	ENSMUST00000107798.4	2421	8	-84	-2488	-3	1777	multi-exon	FALSE	canonical	3	9	junction_3	29.3250606763817	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTTCTACTTTAAAA	-1	True	NA	NA	False	AATAAA	-11	NA	45342097	45377444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45342728_45348105_45348220_45349536_45349592_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ES.23322.1	chr4	-	133	1	Intergenic	novelGene_19140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2542	False	NA	NA	False	NA	NA	NA	45395110	45394977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45395000_45395100
ES.23323.1	chr4	-	4412	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	19	2	-7	-2	multi-exon	FALSE	canonical	3	68	junction_2	5.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTCGGTTGCTCTTTGG	2	True	NA	-1	True	ATTAAA	-15	NA	45408742	45395924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45400180_45404726_45404836_45408694
ES.23323.2	chr4	-	4306	3	FSM	ENSMUSG00000045973.19	ENSMUST00000116341.4	4438	3	-8	140	-8	-140	multi-exon	FALSE	canonical	3	68	junction_2	5.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTCTCTAGATTTAA	682	False	NA	-1	True	AATAAA	-20	NA	45408774	45396062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45400180_45404726_45404836_45408694
ES.23323.4	chr4	-	3467	4	NNC	ENSMUSG00000045973.19	novel	4433	3	NA	NA	-8	-142	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.9380403953437	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTCTCTCTAGATTT	1	True	NA	-3	True	AATAAA	-18	NA	45408743	45396064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45397033_45397838_45400180_45404726_45404836_45408694
ES.23323.5	chr4	-	2086	3	FSM	ENSMUSG00000045973.19	ENSMUST00000116341.4	4438	3	-148	2500	-148	818	multi-exon	FALSE	canonical	3	68	junction_2	5.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGGGTTTTAATGCA	8	True	NA	NA	False	AATAAA	-18	NA	45408914	45398422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45400180_45404726_45404836_45408694
ES.23323.7	chr4	-	1913	3	NNC	ENSMUSG00000045973.19	novel	4433	3	NA	NA	10	818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	39	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGGGTTTTAATGCA	-6	True	NA	NA	False	AATAAA	-18	NA	45408750	45398422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45400180_45404726_45404827_45408694
ES.23323.8	chr4	-	1824	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	-1	-818	0	818	multi-exon	FALSE	canonical	3	9	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGGGTTTTAATGCA	-17	True	NA	NA	False	AATAAA	-18	NA	45408761	45398422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45400180_45408694
ES.23323.9	chr4	-	893	1	ISM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	8681	3265	4786	53	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCTTTGTTCCTAAT	9376	False	NA	NA	False	NA	NA	NA	45400080	45399187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_45399200_45400100
ES.23324.1	chr4	-	3166	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	-921	-1	-921	1	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTAGTCGGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	45531251	45423276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
ES.23324.2	chr4	-	1744	6	NNC	ENSMUSG00000044813.16	novel	2244	6	NA	NA	-258	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.8560380809986	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATTAGTCGGGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	45490052	45423278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45489782
ES.23324.3	chr4	-	2063	7	NNC	ENSMUSG00000044813.16	novel	2244	6	NA	NA	-425	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	40.2509489191111	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATTAGTCGGGTTTT	29	True	NA	NA	False	AATAAA	-15	NA	45530755	45423279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561_45529849_45530452
ES.23324.4	chr4	-	2340	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	-499	403	-499	-403	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGAGATGCCTTCCAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	45530829	45423680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
ES.23324.5	chr4	-	5795	1	Genic_Genomic	ENSMUSG00000044813.16	novel	NA	NA	NA	NA	-487	-66703	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCCACCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	45530817	45525022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_45525000_45530800
ES.23325.1	chr4	+	216	1	Intergenic	novelGene_19141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTGTCACAAACCCCA	NA	False	NA	NA	False	NA	NA	NA	45533246	45533462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45533200_45533500
ES.23326.1	chr4	+	176	1	Intergenic	novelGene_19142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATATAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	45534937	45535113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45534900_45535100
ES.23327.1	chr4	+	1815	2	Intergenic	novelGene_19143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAACTGGTGTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	45580545	45590598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45580763_45589000
ES.23327.2	chr4	+	4137	2	Intergenic	novelGene_19144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTGGTGTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	45580555	45590597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45580763_45586667
ES.23328.1	chr4	-	175	1	Intergenic	novelGene_19145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCCCAAAATAT	NA	False	NA	NA	False	NA	NA	NA	45773799	45773624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45773600_45773800
ES.23329.1	chr4	+	2426	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	-131	3	-131	-3	multi-exon	FALSE	canonical	3	42	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTATCACTGTTTTC	-15	True	NA	9	True	ATTAAA	-23	NA	45798890	45804601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45799170_45802454
ES.23329.2	chr4	+	177	1	Intergenic	novelGene_19146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTCAC	2777	False	NA	NA	False	NA	NA	NA	45801881	45802058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45801900_45802100
ES.23329.3	chr4	+	177	2	Antisense	novelGene_ENSMUSG00000035551.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTCA	2777	False	NA	NA	False	NA	NA	NA	45801881	45812416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_45801901_45812258
ES.23329.4	chr4	+	161	1	Intergenic	novelGene_19147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	7361	False	NA	NA	False	NA	NA	NA	45812239	45812400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_45812200_45812400
ES.2333.1	chr10	+	2088	1	Intergenic	novelGene_1780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12583081	12585169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12583100_12585200
ES.23330.1	chr4	-	1218	5	FSM	ENSMUSG00000035551.7	ENSMUST00000044297.7	2864	5	66	1580	66	-1580	multi-exon	FALSE	canonical	1	2	junction_1	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGTCTGTAACTGCT	0	True	NA	NA	False	AAAACA	-24	NA	45826857	45811047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826357
ES.23331.1	chr4	-	170	1	Intergenic	novelGene_19148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	45884214	45884044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_45884000_45884200
ES.23332.1	chr4	+	1684	1	ISM	ENSMUSG00000028327.15	ENSMUST00000107783.8	3669	19	36659	2	11112	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCACTACCTCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	45885322	45887006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45885300_45887000
ES.23333.1	chr4	+	3776	17	FSM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	-64	4	-64	-4	multi-exon	FALSE	canonical	0	0	junction_9	2.54644359843292	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGATGTCTTAGTTT	9	True	NA	NA	False	AATAAA	-15	NA	45972168	46034757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
ES.23333.2	chr4	+	3592	15	ISM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	65	8034	65	-8034	5prime_fragment	FALSE	canonical	0	0	junction_9	2.71052370871575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTAGTCTGTGCTAAA	-9	True	NA	NA	False	TATAAA	-22	NA	45972297	46026727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656
ES.23333.3	chr4	+	3288	5	ISM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	66	39951	66	7188	intron_retention	FALSE	canonical	2	5	junction_3	1.4790199457749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAGTTTATTGGTCA	-8	True	NA	NA	False	AATAAA	-15	NA	45972298	45994810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196
ES.23333.4	chr4	+	1068	6	NIC	ENSMUSG00000035517.18	novel	3716	17	NA	NA	72	-150	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.65329983228432	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCCAGAAGGCAATTC	-2	True	NA	NA	False	CATAAA	-13	NA	45972304	46005442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_46005116
ES.23333.6	chr4	+	3402	16	NIC	ENSMUSG00000035517.18	novel	3716	17	NA	NA	101	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.94089933334837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGTCTTAGTTTGCTT	27	False	NA	NA	False	AATAAA	-19	NA	45972333	46034761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_45972437_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
ES.23334.10	chr4	+	3078	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	-78	-4	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_16	82.7255744081419	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTCTGGGAGTCATGGT	-9	True	NA	17	True	AATAAA	-17	NA	46138534	46172399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166743_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.11	chr4	+	2480	1	Genic_Genomic	ENSMUSG00000028330.9	novel	NA	NA	NA	NA	-71	-19078	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATTTAGATTGAATC	-2	True	NA	NA	False	NA	NA	NA	46138541	46141021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_46138500_46141000
ES.23334.13	chr4	+	5936	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-61	-2865	-61	2865	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTTCATATGTCAGT	8	True	NA	NA	False	TATAAA	-15	NA	46138551	46175268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.14	chr4	+	2947	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	82.4010676533576	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGGAGTCATGGTTT	-4	True	NA	19	True	AATAAA	-19	NA	46138581	46172401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46153001_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.18	chr4	+	2892	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	109	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	83.4748440356546	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	-32	True	NA	18	True	AATAAA	-18	NA	46138721	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165283_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.19	chr4	+	2779	22	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	114	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	83.1467843942388	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	-27	True	NA	18	True	AATAAA	-18	NA	46138726	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46171892
ES.23334.2	chr4	+	3153	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-137	-6	-137	6	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGGTTTATCATCTT	NA	False	NA	27	True	AATAAA	-27	NA	46138475	46172409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.20	chr4	+	2918	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	118	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	83.0526568006882	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	-23	True	NA	18	True	AATAAA	-18	NA	46138730	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145504_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.21	chr4	+	2881	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	81.9698594072216	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	-23	True	NA	21	True	AATAAA	-21	NA	46138730	46172403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170575_46171892
ES.23334.22	chr4	+	2225	18	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	120	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.6075145594995	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	-21	True	NA	18	True	AATAAA	-18	NA	46138732	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144862_46153001_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.24	chr4	+	2817	24	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	81.7381591061621	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	-14	True	NA	21	True	AATAAA	-21	NA	46138739	46172403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46152997_46153062_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.25	chr4	+	1709	12	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	141	12305	141	-1	5prime_fragment	FALSE	canonical	3	307	junction_6	34.2074372078731	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCGAGGTCGTTCCATG	0	True	NA	NA	False	AATAAA	-18	NA	46138753	46160098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658
ES.23334.26	chr4	+	3632	22	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	143	-3	intron_retention	FALSE	canonical	3	296	junction_18	36.719813060551	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	2	True	NA	18	True	AATAAA	-18	NA	46138755	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.27	chr4	+	2849	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	149	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	82.4469777022263	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	8	True	NA	18	True	AATAAA	-18	NA	46138761	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159667_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.29	chr4	+	2773	22	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	159	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	85.1416054025383	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	18	True	NA	18	True	AATAAA	-18	NA	46138771	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.30	chr4	+	2782	22	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	161	-4	combination_of_known_splicesites	FALSE	canonical	2	18	junction_12	82.0468037435654	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTCTGGGAGTCATGGT	20	True	NA	17	True	AATAAA	-17	NA	46138773	46172399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.31	chr4	+	4723	22	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	191	0	intron_retention	FALSE	canonical	3	296	junction_18	37.1747116152025	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	50	False	NA	21	True	AATAAA	-21	NA	46138803	46172403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46138887_46144784_46144874_46145373_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.32	chr4	+	6934	20	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	7243	-2865	7243	2865	3prime_fragment	FALSE	canonical	3	296	junction_16	37.7097825614392	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTTCATATGTCAGT	7029	False	NA	NA	False	TATAAA	-15	NA	46145855	46175268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.33	chr4	+	1598	12	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	21045	3	1757	-3	3prime_fragment	FALSE	canonical	3	296	junction_8	38.2836304918481	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	NA	False	NA	18	True	AATAAA	-18	NA	46159657	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.34	chr4	+	4279	1	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	3307	5387	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGCACTCCTTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	46161207	46165486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46161200_46165500
ES.23334.35	chr4	+	1972	9	ISM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	23770	3	-2813	-3	3prime_fragment	FALSE	canonical	3	296	junction_5	42.7695496235347	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	NA	False	NA	18	True	AATAAA	-18	NA	46162382	46172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.4	chr4	+	2772	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-107	345	-107	79	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTGAATGTTTGCTTT	3	True	NA	NA	False	NA	NA	NA	46138505	46172058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.5	chr4	+	5433	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-94	-2329	-94	2329	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTTTTCCCTTTTAAT	16	True	NA	NA	False	GATAAA	-18	NA	46138518	46174732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.6	chr4	+	3040	23	NNC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	109.123262247957	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	17	True	NA	21	True	AATAAA	-21	NA	46138519	46172403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46138887_46144784_46144874_46145373_46145504_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46153001_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23334.9	chr4	+	3244	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	-79	-155	-79	155	multi-exon	FALSE	canonical	3	296	junction_19	36.3529529761015	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAAAGTTACTTTAAAC	-10	True	NA	NA	False	NA	NA	NA	46138533	46172558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ES.23335.1	chr4	-	3928	11	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	13	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.9069263796581	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCTGGTGCGTCCCA	17	True	NA	13	True	AATAAA	-41	NA	46138681	46114729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46136174_46136353_46138491
ES.23335.10	chr4	-	3620	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	-3	True	AATAAA	-25	NA	46138455	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.13	chr4	-	3103	6	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-232	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	89.7507660134441	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	6543	False	NA	-3	True	AATAAA	-25	NA	46132155	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46129226_46129348_46131842
ES.23335.14	chr4	-	3719	11	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1549739161384	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	8	True	NA	-3	True	AATAAA	-25	NA	46138423	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46121898_46121944_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.16	chr4	-	3836	10	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	59.1553719005414	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-2	True	NA	-6	True	AATAAA	-22	NA	46138700	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138491
ES.23335.17	chr4	-	4338	9	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	32	junction_3	55.131093767492	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	6	True	NA	-6	True	AATAAA	-22	NA	46138425	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.18	chr4	-	3926	11	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.6373929619217	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-28	True	NA	-6	True	AATAAA	-22	NA	46138459	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46133436_46133656_46135386_46135595_46138379
ES.23335.19	chr4	-	4107	11	NNC	ENSMUSG00000035495.16	novel	2700	10	NA	NA	14	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	88.6594044645011	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	18	True	NA	-6	True	AATAAA	-22	NA	46138680	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46133361_46133656_46135386_46135592_46138491
ES.23335.2	chr4	-	3757	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	-23	-8	-23	8	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGCTCTGTGCTGGT	200	False	NA	5	True	AATAAA	-33	NA	46138498	46114737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.20	chr4	-	4473	8	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_7	84.7264505840498	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	33	True	NA	-6	True	AATAAA	-22	NA	46138398	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46129226_46129348_46131842_46132157_46135386_46135595_46137320
ES.23335.21	chr4	-	3944	12	NNC	ENSMUSG00000035495.16	novel	2700	10	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.2750309834238	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	27	True	NA	-6	True	AATAAA	-22	NA	46138671	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46126674_46126855_46127797_46127844_46129226_46129348_46131842_46132157_46135386_46135592_46138491
ES.23335.22	chr4	-	4150	9	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	160	junction_8	17.7763888346312	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	-23	True	NA	-6	True	AATAAA	-22	NA	46138454	46114748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.23	chr4	-	6466	9	ISM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	41	4	4	-4	intron_retention	FALSE	canonical	3	146	junction_3	21.117232299712	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTAGGTGGGAAGAGTG	-3	True	NA	-7	True	AATAAA	-21	NA	46138434	46114749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386
ES.23335.24	chr4	-	3798	11	NIC	ENSMUSG00000035495.16	novel	2700	10	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	77.8270518521677	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTAGGTGGGAAGAGTG	-15	True	NA	-7	True	AATAAA	-21	NA	46138446	46114749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46137320_46137429_46138379
ES.23335.25	chr4	-	3889	11	NNC	ENSMUSG00000035495.16	novel	2700	10	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	83.975234444448	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTAGGTGGGAAGAGT	10	True	NA	-8	True	AATAAA	-20	NA	46138421	46114750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46133396_46133622_46135386_46135592_46138379
ES.23335.28	chr4	-	4841	9	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	141	-331	intron_retention	FALSE	canonical	1	5	junction_8	64.8535610047744	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGTACCCCGCAGGTG	3061	False	NA	NA	False	AATAAA	-22	NA	46135637	46115076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46133656_46135386
ES.23335.30	chr4	-	3373	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	20	333	0	-333	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGAGTACCCCGCAGG	-24	True	NA	NA	False	AATAAA	-20	NA	46138455	46115078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23335.31	chr4	-	587	2	ISM	ENSMUSG00000035495.16	ENSMUST00000160008.2	1547	6	-41	11678	1	419	5prime_fragment	FALSE	canonical	3	160	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAGGTCCTAGAGAAGG	-23	True	NA	NA	False	NA	NA	NA	46138454	46135082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46135595_46138379
ES.23335.32	chr4	-	3371	1	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	417	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTAGGTCCTAGAGAA	-24	True	NA	NA	False	NA	NA	NA	46138455	46135084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46135100_46138500
ES.23335.33	chr4	-	678	2	ISM	ENSMUSG00000035495.16	ENSMUST00000147837.8	634	3	3	3183	3	385	5prime_fragment	FALSE	canonical	3	12	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7	True	NA	NA	False	NA	NA	NA	46138691	46135116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46135595_46138491
ES.23335.5	chr4	-	3852	11	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	84.9555177725379	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGGGAAGAGTGCTCTG	-15	True	NA	-2	True	AATAAA	-26	NA	46138446	46114744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46133381_46133622_46135386_46135595_46138379
ES.23335.7	chr4	-	3497	9	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	1	0	combination_of_known_splicesites	TRUE	canonical	2	6	junction_8	64.5402006504473	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-23	True	NA	-3	True	AATAAA	-25	NA	46138454	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46138379
ES.23335.8	chr4	-	3982	11	NIC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	76.6373929619217	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-26	True	NA	-3	True	AATAAA	-25	NA	46138457	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46133381_46133656_46135386_46135595_46138379
ES.23335.9	chr4	-	3520	9	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.0421763822049	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	-3	True	AATAAA	-25	NA	46138455	46114745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46127797_46127844_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ES.23336.1	chr4	-	1014	6	NNC	ENSMUSG00000028329.14	novel	1241	6	NA	NA	3	-221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.7817022132775	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTCGTCCATCTAT	7	True	NA	NA	False	AAAAAG	-12	NA	46196308	46155567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46155824_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ES.23336.2	chr4	-	1470	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	-20	-495	-20	495	multi-exon	FALSE	canonical	3	75	junction_2	5.6	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACTCATTTATCATT	-16	True	NA	NA	False	ATTAAA	-21	NA	46196331	46174726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ES.23336.3	chr4	-	415	3	ISM	ENSMUSG00000028329.14	ENSMUST00000132358.8	729	5	2507	-4	2507	4	3prime_fragment	FALSE	canonical	1	2	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGTCTTCACAGAAACA	1173	False	NA	3	True	AATAAA	-22	NA	46183142	46175217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46175416_46180206_46180399_46183117
ES.23336.4	chr4	-	959	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	-4	0	-4	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	0	True	NA	-1	True	AATAAA	-18	NA	46196315	46175221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ES.23336.5	chr4	-	5682	1	NIC	ENSMUSG00000028329.14	novel	729	5	NA	NA	4746	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	3412	False	NA	-1	True	AATAAA	-18	NA	46180903	46175221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46175200_46180900
ES.23336.6	chr4	-	916	5	NIC	ENSMUSG00000028329.14	novel	903	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.7587401903367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATTTTTGCACAGCAG	6	True	NA	NA	False	AATAAA	-18	NA	46196309	46182967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46183236_46184280_46184454_46185590_46185697_46193049_46193158_46196048
ES.23336.7	chr4	-	3973	3	ISM	ENSMUSG00000028329.14	ENSMUST00000142380.2	903	5	7174	0	-2536	0	3prime_fragment	FALSE	canonical	3	75	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATTTTTGCACAGCA	7185	False	NA	NA	False	AATAAA	-17	NA	46189130	46182968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46183236_46184287_46184454_46185590
ES.23337.1	chr4	+	174	1	Intergenic	novelGene_19149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCAAAGCAAGCGGGGT	NA	False	NA	NA	False	NA	NA	NA	46198888	46199062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46198900_46199100
ES.23338.1	chr4	+	211	1	Intergenic	novelGene_19150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAACATTTATCAGAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	46228600	46228811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46228600_46228800
ES.23339.1	chr4	+	1319	1	FSM	ENSMUSG00000070990.3	ENSMUST00000095097.3	2804	1	851	634	851	-634	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTGCAAAATTGTT	256	False	NA	NA	False	AATAAA	-34	NA	46344459	46345778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46344500_46345800
ES.2334.1	chr10	+	2279	6	Antisense	novelGene_ENSMUSG00000019820.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTTTCTAAGTTACAG	NA	False	NA	NA	False	NA	NA	NA	12588118	12604071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_12589179_12589876_12590119_12595761_12595849_12596561_12596685_12601952_12602123_12603474
ES.2334.2	chr10	+	3411	1	Intergenic	novelGene_1781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12591668	12595079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12591700_12595100
ES.23340.1	chr4	-	4913	4	NIC	ENSMUSG00000028331.13	novel	1527	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	91	junction_3	14.0554457615387	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGAGCTTTGAAT	8	True	NA	NA	False	ATTAAA	-27	NA	46389415	46379863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46380311_46382058_46386252_46387567_46387743_46389317
ES.23340.2	chr4	-	1527	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	-8	8	-8	-8	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTGTCTGAG	-22	True	NA	NA	False	ATTAAA	-19	NA	46389445	46379871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
ES.23340.3	chr4	-	3071	4	ISM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	23	8	4	-8	intron_retention	FALSE	canonical	3	116	junction_1	3.77123616632825	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTGTCTGAG	9	True	NA	NA	False	ATTAAA	-19	NA	46389414	46379871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567
ES.23340.4	chr4	-	4342	3	ISM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	15	61	1	-61	intron_retention	FALSE	canonical	3	116	junction_1	4	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTATATTCTTTTTTA	1	True	NA	NA	False	NA	NA	NA	46389422	46379924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46380311_46382058_46382686_46386093
ES.23340.5	chr4	-	1399	5	NNC	ENSMUSG00000028331.13	novel	1527	5	NA	NA	63	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.6402887530074	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGCTCTTGTCATC	7512	False	NA	NA	False	NA	NA	NA	46389355	46380015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389211
ES.23340.6	chr4	-	1294	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	1	232	1	-232	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGCTGACCCTGAGGA	-13	True	NA	NA	False	ATTAAA	-19	NA	46389436	46380095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
ES.23341.1	chr4	+	1218	6	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-337	-130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3043.97742435781	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	NA	False	NA	23	True	AATAAA	-19	NA	46450564	46472527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46450762_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46469961_46472086
ES.23341.11	chr4	+	1379	5	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-1	-134	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2586.53368429642	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	3	True	NA	19	True	AATAAA	-15	NA	46450900	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46472095
ES.23341.12	chr4	+	1745	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	2724.04399257233	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	14	False	NA	5	True	AATAAA	-17	NA	46450911	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46456385_46456428_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.13	chr4	+	1603	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	19	-136	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	2724.04399257233	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	-33	True	NA	17	True	AATAAA	-13	NA	46450920	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46456385_46456428_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.14	chr4	+	1673	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2243.00226011676	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCTAGTTGTACTCTC	-32	True	NA	4	True	AATAAA	-16	NA	46450921	46472653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471462_46472099
ES.23341.15	chr4	+	1480	5	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2586.53368429642	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	-31	True	NA	5	True	AATAAA	-17	NA	46450922	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46472103
ES.23341.16	chr4	+	4047	5	NIC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	22	-132	intron_retention	FALSE	canonical	3	5377	junction_1	340.582130329822	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTCTCATGCTTTTC	-30	True	NA	21	True	AATAAA	-17	NA	46450923	46472525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46471468_46472086
ES.23341.18	chr4	+	1551	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCTAGTTGTACTCTC	-29	True	NA	4	True	AATAAA	-16	NA	46450924	46472653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460143_46463847_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.19	chr4	+	1604	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	23	-134	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2259.66379628081	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-29	True	NA	19	True	AATAAA	-15	NA	46450924	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451395_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.2	chr4	+	1676	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-76	116	-76	-116	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTTTTTTTTC	NA	False	NA	37	True	AATAAA	-33	NA	46450825	46472541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.20	chr4	+	1520	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	23	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2206.10690281923	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	-29	True	NA	17	True	AATAAA	-13	NA	46450924	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468792_46469923_46470008_46471397_46471468_46472086
ES.23341.23	chr4	+	1666	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	25	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2673.47122822806	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	-27	True	NA	17	True	AATAAA	-13	NA	46450926	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46466347_46466459_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.27	chr4	+	1698	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	57	-3	at_least_one_novel_splicesite	FALSE	canonical	3	202	junction_5	2168.7001291096	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	5	True	NA	5	True	AATAAA	-17	NA	46450958	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470050_46471397_46471468_46472086
ES.23341.28	chr4	+	1517	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	57	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	5	True	NA	17	True	AATAAA	-13	NA	46450958	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463812_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.29	chr4	+	2143	6	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	58	134	58	-134	intron_retention	FALSE	canonical	3	5377	junction_1	336.790379910116	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	6	True	NA	19	True	AATAAA	-15	NA	46450959	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397
ES.23341.3	chr4	+	1778	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	-58	-4	-58	4	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACTCTCACATTTCT	NA	False	NA	12	True	AATAAA	-24	NA	46450843	46472661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.30	chr4	+	1440	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2096.77240791943	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	6	True	NA	17	True	AATAAA	-13	NA	46450959	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086_46472406_46472487
ES.23341.31	chr4	+	1375	6	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2423.63094550305	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGCTTTTCTTTCT	6	True	NA	26	True	AATAAA	-22	NA	46450959	46472530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46469976_46472140
ES.23341.33	chr4	+	1525	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	6	True	NA	5	True	AATAAA	-17	NA	46450959	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460151_46463847_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.35	chr4	+	1566	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-134	at_least_one_novel_splicesite	FALSE	canonical	3	202	junction_5	2168.7001291096	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	6	True	NA	19	True	AATAAA	-15	NA	46450959	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470050_46471397_46471468_46472086
ES.23341.37	chr4	+	1343	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2261.14922231054	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	6	True	NA	19	True	AATAAA	-15	NA	46450959	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451169_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.38	chr4	+	1515	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2845.91939840576	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	6	True	NA	19	True	AATAAA	-15	NA	46450959	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471404_46471468_46472088
ES.23341.39	chr4	+	1495	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2243.00226011676	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTTTTCTCATGCT	6	True	NA	17	True	AATAAA	-13	NA	46450959	46472521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471441_46472086
ES.23341.4	chr4	+	1642	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-57	-124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2243.00226011676	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTTCTTTCTTTT	NA	False	NA	29	True	AATAAA	-25	NA	46450844	46472533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471461_46472086
ES.23341.42	chr4	+	1642	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	60	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2206.10690281923	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	8	True	NA	5	True	AATAAA	-17	NA	46450961	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468792_46469897_46470008_46471397_46471468_46472086
ES.23341.43	chr4	+	3046	6	NIC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	60	0	intron_retention	FALSE	canonical	3	5377	junction_1	336.392984469058	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	8	True	NA	8	True	AATAAA	-20	NA	46450961	46472657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46471468_46472086
ES.23341.44	chr4	+	1466	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	62	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2261.14922231054	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	10	True	NA	5	True	AATAAA	-17	NA	46450963	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451165_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.45	chr4	+	1513	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	63	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	11	True	NA	23	True	AATAAA	-19	NA	46450964	46472527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460230_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.46	chr4	+	871	5	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	121	2733	121	-2733	5prime_fragment	FALSE	canonical	3	5377	junction_1	364.527776719415	2569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAGATGAAGACGAA	69	False	NA	NA	False	NA	NA	NA	46451022	46469924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882
ES.23341.48	chr4	+	1296	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	157	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2216.3458477112	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	11	False	NA	19	True	AATAAA	-15	NA	46451058	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463913_46468670_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.49	chr4	+	5105	6	NIC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	181	3	intron_retention	FALSE	canonical	3	5377	junction_1	307.150516848011	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTACTCTCACATTTC	-13	True	NA	11	True	AATAAA	-23	NA	46451082	46472660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46451350_46460089_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.5	chr4	+	1612	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-32	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	NA	False	NA	23	True	AATAAA	-19	NA	46450869	46472527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469888_46470008_46471397_46471468_46472086
ES.23341.51	chr4	+	1314	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	184	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2261.14922231054	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-10	True	NA	19	True	AATAAA	-15	NA	46451085	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451266_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.52	chr4	+	1379	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	188	-134	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2206.10690281923	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-6	True	NA	19	True	AATAAA	-15	NA	46451089	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469897_46470008_46471397_46471468_46472086
ES.23341.53	chr4	+	1402	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	225	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2261.14922231054	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCTAGTTGTACTCT	4	False	NA	3	True	AATAAA	-15	NA	46451126	46472652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451266_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.54	chr4	+	1281	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	226	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2096.77240791943	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	5	False	NA	19	True	AATAAA	-15	NA	46451127	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086_46472406_46472480
ES.23341.56	chr4	+	2242	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	665	-3	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	2252.60811801195	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	415	False	NA	5	True	AATAAA	-17	NA	46451566	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46452544_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.57	chr4	+	1359	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	1092	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2261.14922231054	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	842	False	NA	19	True	AATAAA	-15	NA	46451993	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46452219_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.58	chr4	+	4537	6	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	5789	130	5789	-130	3prime_fragment	FALSE	canonical	3	5793	junction_4	208.339530574493	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTCATGCTTTTCTT	1892	False	NA	23	True	AATAAA	-19	NA	46456690	46472527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.59	chr4	+	6720	5	NIC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	7181	-122	intron_retention	FALSE	canonical	3	5793	junction_3	203.666854200677	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTCTTTCTTTTTT	3284	False	NA	31	True	AATAAA	-27	NA	46458082	46472535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.6	chr4	+	1603	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-30	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2243.00226011676	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	-8	True	NA	19	True	AATAAA	-15	NA	46450871	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471472_46472099
ES.23341.60	chr4	+	2107	6	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	8346	3	8346	-3	3prime_fragment	FALSE	canonical	3	5793	junction_4	208.339530574493	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	4449	False	NA	5	True	AATAAA	-17	NA	46459247	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.61	chr4	+	1275	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	9239	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2831.07608614738	2605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	5342	False	NA	19	True	AATAAA	-15	NA	46460140	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46460240_46463203_46463396_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.62	chr4	+	3707	4	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	10793	142	10793	-142	intron_retention	FALSE	canonical	3	5793	junction_3	194.522206672886	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGGGTCTGTTTTCT	6896	False	NA	11	True	AATAAA	-7	NA	46461694	46472515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46463930_46468558_46468788_46469882_46470008_46471397
ES.23341.63	chr4	+	2190	4	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	12449	3	12449	-3	intron_retention	FALSE	canonical	3	5793	junction_3	194.522206672886	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	8552	False	NA	5	True	AATAAA	-17	NA	46463350	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46463930_46468558_46468788_46469882_46470008_46471397
ES.23341.64	chr4	+	862	4	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	17656	134	17656	-134	3prime_fragment	FALSE	canonical	3	5793	junction_2	213.552491595548	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTTTCTCATGCTTT	4685	False	NA	19	True	AATAAA	-15	NA	46468557	46472523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46468788_46469882_46470008_46471397_46471468_46472086
ES.23341.65	chr4	+	765	3	ISM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	18979	3	18979	-3	3prime_fragment	FALSE	canonical	3	5793	junction_1	2	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	1158	False	NA	5	True	AATAAA	-17	NA	46469880	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_46470008_46471397_46471468_46472086
ES.23341.7	chr4	+	1690	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-25	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	2243.2478995619	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	-3	True	NA	5	True	AATAAA	-17	NA	46450876	46472654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46469996_46471433_46471468_46472086
ES.23341.8	chr4	+	1727	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2243.00226011676	2607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTACTCTCACATTTC	-2	True	NA	11	True	AATAAA	-23	NA	46450877	46472660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471457_46472091
ES.23342.1	chr4	-	1048	1	Antisense	novelGene_ENSMUSG00000028333.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAATTTAATAT	-4	True	NA	NA	False	NA	NA	NA	46451479	46450431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_46450400_46451500
ES.23343.1	chr4	+	152	1	Intergenic	novelGene_19151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7295	False	NA	NA	False	NA	NA	NA	46479867	46480019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46479900_46480000
ES.23344.1	chr4	+	1238	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	-12	953	-12	-953	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCCAGTGTGTT	NA	False	NA	17	True	AATAAA	-30	NA	46489235	46502679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ES.23344.2	chr4	+	1016	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	-10	-961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	361.736146935857	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTGCTGCTGTCC	-7	True	NA	9	True	AATAAA	-22	NA	46489308	46502671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500914_46502509
ES.23344.3	chr4	+	1048	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	0	-959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	365.616520414491	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGCTGCTGTCCAG	3	True	NA	11	True	AATAAA	-24	NA	46489318	46502673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500166_46500221_46500712_46500980_46502434
ES.23344.4	chr4	+	1914	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	71	194	0	-194	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTGTCTTCATCTTA	3	True	NA	5	True	NA	NA	NA	46489318	46503438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ES.23344.5	chr4	+	1182	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	1	-959	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	357.435085015447	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGCTGCTGTCCAG	4	True	NA	11	True	AATAAA	-24	NA	46489319	46502673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502400
ES.23344.6	chr4	+	2085	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	81	13	10	-13	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGACCTGTACTTACT	13	True	NA	1	True	NA	NA	NA	46489328	46503619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ES.23345.1	chr4	-	1298	1	Genic_Genomic	ENSMUSG00000039853.19	novel	NA	NA	NA	NA	-167	-9898	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3627	False	NA	NA	False	NA	NA	NA	46534771	46533473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_46533500_46534800
ES.23346.1	chr4	+	203	1	Intergenic	novelGene_19152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGACACACACTTAGCAT	NA	False	NA	NA	False	NA	NA	NA	46570455	46570658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46570500_46570700
ES.23347.1	chr4	+	186	1	Intergenic	novelGene_19153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGTTATTATTAAACAT	NA	False	NA	NA	False	NA	NA	NA	46594889	46595075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46594900_46595100
ES.23348.1	chr4	-	3871	12	FSM	ENSMUSG00000028337.15	ENSMUST00000107756.4	4154	12	282	1	-26	-1	multi-exon	TRUE	canonical	0	0	junction_3	1.27920429813366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAATGCTTGGCGAT	288	False	NA	NA	False	AATAAA	-18	NA	46601920	46536943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46539268_46540417_46540690_46541892_46541984_46542234_46542348_46543347_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767_46548918_46551328_46551446_46562894_46563096_46601816
ES.23348.2	chr4	-	2331	1	NIC	ENSMUSG00000028337.15	novel	4154	12	NA	NA	-50	-24692	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGCTGGCAAGGTTGCA	264	False	NA	NA	False	NA	NA	NA	46601944	46599613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46599600_46601900
ES.23349.1	chr4	+	3305	1	Antisense	novelGene_ENSMUSG00000039813.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCTCCTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	46620473	46623778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_46620500_46623800
ES.2335.1	chr10	+	167	1	Intergenic	novelGene_1782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAATCACAC	NA	False	NA	NA	False	NA	NA	NA	12650552	12650719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12650600_12650700
ES.23350.1	chr4	+	192	1	Intergenic	novelGene_19154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	46645173	46645365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46645200_46645400
ES.23351.10	chr4	-	2433	9	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	16	-9515	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_5	6.45053292372033	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGCCTCCGTTTCTT	2	True	NA	NA	False	NA	NA	NA	46650193	46613904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628637_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23351.11	chr4	-	2256	9	ISM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	90	9519	90	-9519	5prime_fragment	FALSE	canonical	2	8	junction_8	4.13634802694357	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTGCCTGTGCCTCCGTT	-6	True	NA	NA	False	NA	NA	NA	46650119	46613908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23351.12	chr4	-	1162	4	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	464	4746	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	9.20144916122817	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCTTCCTTCACCTCA	450	False	NA	NA	False	AATAAA	-17	NA	46649745	46627833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46628637_46629875_46630010_46637588_46637737_46649668
ES.23351.13	chr4	-	1419	5	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	349	4746	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.04285397107271	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCTTCCTTCACCTCA	335	False	NA	NA	False	AATAAA	-17	NA	46649860	46627833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46628637_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23351.14	chr4	-	3102	2	Genic_Genomic	ENSMUSG00000039813.15	novel	4315	13	NA	NA	45	-14281	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGAGACCTAGTTTCT	31	True	NA	NA	False	AATAAA	-13	NA	46650164	46646860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_46647301_46647502
ES.23351.2	chr4	-	4330	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	-15	0	-15	0	multi-exon	TRUE	canonical	2	8	junction_12	4.63381292481928	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTGGGCTGCCTGA	-29	True	NA	1	True	AATAAA	-15	NA	46650224	46604389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23351.3	chr4	-	4529	11	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	19702	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	8.14861951498535	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTCTGGGCTGCCTG	NA	False	NA	0	True	AATAAA	-14	NA	46630507	46604390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615271_46615570_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46630206
ES.23351.4	chr4	-	4044	12	NIC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	127	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	6.26679561440512	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGTGTCTGGGCTGCCT	113	False	NA	-1	True	AATAAA	-13	NA	46650082	46604391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46649668
ES.23351.7	chr4	-	4216	13	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	25	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.98044484975618	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAATAAATAAGAG	11	True	NA	-27	True	NA	NA	NA	46650184	46604417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46605920_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628541_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23351.8	chr4	-	3917	11	NIC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	80	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	6.68206554891525	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAATAAATAAGAG	66	False	NA	-27	True	NA	NA	NA	46650129	46604417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46649668
ES.23351.9	chr4	-	4493	13	NNC	ENSMUSG00000039813.15	novel	4315	13	NA	NA	-260	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.7618209250336	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAATAAATAAGAG	NA	False	NA	-27	True	NA	NA	NA	46650469	46604417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628484_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ES.23352.1	chr4	+	177	1	Intergenic	novelGene_19155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCATTGG	NA	False	NA	NA	False	NA	NA	NA	46877649	46877826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_46877600_46877800
ES.23353.1	chr4	-	5656	16	NNC	ENSMUSG00000066191.13	novel	3438	16	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_3	2.18072363117282	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGAGTTTGTGCTCTT	12	True	NA	NA	False	ATTAAA	-14	NA	47057314	47015688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_47016817_47017522_47017620_47023743_47023861_47024505_47024661_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47041164_47043535_47043643_47044228_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.2	chr4	-	3791	16	FSM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	86	-439	-35	0	multi-exon	FALSE	canonical	1	1	junction_8	1.85711843695788	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGAGTTTGTGCTCTT	-15	True	NA	NA	False	ATTAAA	-14	NA	47057341	47015688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_47016817_47017522_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.3	chr4	-	3804	16	NIC	ENSMUSG00000066191.13	novel	3980	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.91369334592098	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGAGTTTGTGCTCTT	2	True	NA	NA	False	ATTAAA	-14	NA	47057324	47015688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_47016817_47017492_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.4	chr4	-	7021	16	NNC	ENSMUSG00000066191.13	novel	3980	17	NA	NA	39	-5	intron_retention	FALSE	canonical	0	0	junction_13	2.07203603572267	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCCTGAGTTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	47057388	47015693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_47016817_47017492_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47047376_47047541_47049068_47049572_47056948
ES.23353.5	chr4	-	3823	16	NNC	ENSMUSG00000066191.13	novel	3438	16	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCCTGAGTTTGTG	-8	True	NA	NA	False	ATTAAA	-9	NA	47057334	47015693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_47016817_47017522_47017620_47023743_47023861_47025685_47025798_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.6	chr4	-	4117	11	ISM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	139	12563	18	9734	5prime_fragment	FALSE	canonical	1	1	junction_3	1.81383571472171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGATTATTGTATCTT	38	False	NA	NA	False	NA	NA	NA	47057288	47028690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.7	chr4	-	2489	8	ISM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	113	21921	-8	376	5prime_fragment	FALSE	canonical	1	1	junction_1	1.82946406783796	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGGTTTTTGTTTTTTG	12	True	NA	NA	False	AGTAAA	-8	NA	47057314	47038048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ES.23353.8	chr4	-	187	1	Intergenic	novelGene_19156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTTACTGGTGAGACC	1987	False	NA	NA	False	NA	NA	NA	47055339	47055152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_47055200_47055300
ES.23354.1	chr4	+	2209	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	-122	201	-122	-174	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAAAGCTTCCTGGGTGT	NA	False	NA	NA	False	AAAAAG	-22	NA	47091786	47122869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
ES.23354.2	chr4	+	2966	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	-14	-664	-14	664	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTCGCTCTTCTCTC	NA	False	NA	NA	False	ATTAAA	-12	NA	47091894	47123734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
ES.23354.3	chr4	+	2224	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	38	26	24	1	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTTGATGCCACAGCCAAA	5	True	NA	7	True	AATAAA	-17	NA	47091946	47123044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
ES.23354.4	chr4	+	1892	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	45	351	31	-324	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTCTCCTGGCATCC	12	True	NA	NA	False	NA	NA	NA	47091953	47122719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
ES.23355.1	chr4	+	5797	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	-41	0	-41	0	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACATTCTTTTCTGGA	NA	False	NA	33	True	AATAAA	-24	NA	47353180	47414931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.10	chr4	+	486	2	ISM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-87	28076	-2	22744	5prime_fragment	FALSE	canonical	3	200	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTCTAGACTGCCT	-2	True	NA	NA	False	NA	NA	NA	47353219	47384057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_47353397_47383748
ES.23355.11	chr4	+	5094	6	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	99.7528946948408	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGGCAACATTCTTTT	0	True	NA	28	True	AATAAA	-19	NA	47353221	47414926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47396354_47396586_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.12	chr4	+	5686	10	NNC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.5100564212933	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	0	True	NA	26	True	AATAAA	-17	NA	47353221	47414924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47383748_47383995_47393258_47393372_47393422_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.13	chr4	+	5820	10	NNC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.3126163984407	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	2	True	NA	26	True	AATAAA	-17	NA	47353223	47414924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47382971_47383045_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.15	chr4	+	5662	10	NNC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	11	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.9028837485537	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAATGGCAACATTCT	-16	True	NA	25	True	AATAAA	-16	NA	47353232	47414923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651_47411897_47411971
ES.23355.18	chr4	+	5792	10	NNC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	85.3234948032024	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAATGGCAACATTCT	-10	True	NA	25	True	AATAAA	-16	NA	47353238	47414923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47382971_47383045_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.20	chr4	+	5652	10	NNC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	37	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.9028837485537	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGTCAATGGCAACATT	10	True	NA	23	True	AATAAA	-14	NA	47353258	47414921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651_47413187_47413243
ES.23355.21	chr4	+	5702	9	NNC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.2642404735011	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGCAACATTCTTTTC	12	True	NA	29	True	AATAAA	-20	NA	47353260	47414927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406932_47407053_47410651
ES.23355.23	chr4	+	5584	11	NNC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	87.4308869908112	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	13	True	NA	26	True	AATAAA	-17	NA	47353261	47414924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651_47410788_47410850_47410897_47410946
ES.23355.24	chr4	+	5557	8	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	-19	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	77.3668705135553	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAATGGCAACATTCT	-6	True	NA	25	True	AATAAA	-16	NA	47353287	47414923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47406921_47407053_47410651
ES.23355.25	chr4	+	8935	7	NIC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	-16	-10	intron_retention	FALSE	canonical	3	99	junction_2	45.3642664072358	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGTCAATGGCAACATT	-3	True	NA	23	True	AATAAA	-14	NA	47353290	47414921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47407053_47410651
ES.23355.26	chr4	+	5498	8	NIC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	-14	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	77.0109984193883	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	-1	True	NA	26	True	AATAAA	-17	NA	47353292	47414924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.28	chr4	+	5968	10	NNC	ENSMUSG00000007613.16	novel	1829	10	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5271237028867	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATGGCAACATTCTTTT	332	False	NA	28	True	AATAAA	-19	NA	47353625	47414926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_47353862_47382876_47383045_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.29	chr4	+	4858	1	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	-7032	22728	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47379183	47384041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47379200_47384000
ES.23355.3	chr4	+	5750	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-91	-2798	-6	0	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACATTCTTTTCTGGA	NA	False	NA	33	True	AATAAA	-24	NA	47353215	47414931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.31	chr4	+	6323	7	ISM	ENSMUSG00000007613.16	ENSMUST00000107725.3	1713	8	6037	-3890	6037	-6	3prime_fragment	FALSE	canonical	3	178	junction_5	20.6754013799545	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAATGGCAACATTCTTT	5096	False	NA	27	True	AATAAA	-18	NA	47392252	47414925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.32	chr4	+	516	1	ISM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	59139	2055	26145	743	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCAAAAGTTATCTGAG	2536	False	NA	NA	False	ACTAAA	-25	NA	47412360	47412876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_47412400_47412900
ES.23355.4	chr4	+	5872	10	NIC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	-5	-9	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	83.5217130045228	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCAATGGCAACATTC	NA	False	NA	24	True	AATAAA	-15	NA	47353216	47414922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47382912_47383045_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.5	chr4	+	4863	5	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.7635783600453	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATGGCAACATTCTT	-2	True	NA	26	True	AATAAA	-17	NA	47353219	47414924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.6	chr4	+	5402	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	-2	356	-2	-356	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGATGGTACTGTATTG	-2	True	NA	NA	False	TATAAA	-25	NA	47353219	47414575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.7	chr4	+	5389	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-87	-2441	-2	-357	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGATGGTACTGTATT	-2	True	NA	NA	False	TATAAA	-24	NA	47353219	47414574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.8	chr4	+	5882	10	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	82.4685499350817	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAATGGCAACATTCT	-2	True	NA	25	True	AATAAA	-16	NA	47353219	47414923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47382912_47383045_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ES.23355.9	chr4	+	5613	8	NIC	ENSMUSG00000007613.16	novel	2861	9	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	79.0848162624489	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAATGGCAACATTCT	-2	True	NA	25	True	AATAAA	-16	NA	47353219	47414923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47406921_47407053_47410651
ES.23356.1	chr4	-	3033	3	NNC	ENSMUSG00000039740.7	novel	3021	2	NA	NA	-39	13671	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCTCTGAAATAAGGG	NA	False	NA	NA	False	AGTAAA	-33	NA	47474372	47451395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_47451406_47469869_47472459_47473938
ES.23356.2	chr4	-	3062	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	-41	0	-41	0	multi-exon	FALSE	canonical	3	118	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	NA	False	NA	-2	True	AATAAA	-15	NA	47474374	47469832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_47472459_47473938
ES.23356.3	chr4	-	2910	2	FSM	ENSMUSG00000039740.7	ENSMUST00000143104.2	531	2	-320	-2059	36	-2	multi-exon	FALSE	canonical	2	6	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCAGTTTATGGTTG	19	True	NA	-4	True	AATAAA	-13	NA	47474297	47469834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_47472386_47473938
ES.23356.4	chr4	-	1844	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	40	1137	40	924	multi-exon	FALSE	canonical	3	118	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAATAGAACATTAGAT	23	True	NA	NA	False	AATAAA	-17	NA	47474293	47470969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_47472459_47473938
ES.23357.1	chr4	+	582	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	-19	1	-19	-1	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTGCCTGTGCTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	47474638	47483241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
ES.23357.3	chr4	+	3288	3	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	12	6	12	-6	intron_retention	FALSE	canonical	3	2329	junction_2	37.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACTGGTTGCCTGTGC	-10	True	NA	NA	False	AATAAA	-19	NA	47474669	47483236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_47474754_47474911_47475010_47480130
ES.23358.1	chr4	-	2289	1	Intergenic	novelGene_19157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATGGTAGTAAGC	NA	False	NA	NA	False	NA	NA	NA	47478275	47475986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_47476000_47478300
ES.23359.1	chr4	+	176	1	Intergenic	novelGene_19158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGTGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	47965746	47965922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_47965700_47965900
ES.2336.1	chr10	+	202	1	Intergenic	novelGene_1783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCTTTTTGTTTCCAA	NA	False	NA	NA	False	AATAAA	-1	NA	12658744	12658946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12658700_12658900
ES.23360.1	chr4	-	208	1	Intergenic	novelGene_19159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTTAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	48082040	48081832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48081800_48082000
ES.23361.1	chr4	-	159	1	Intergenic	novelGene_19160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	48117505	48117346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48117300_48117500
ES.23362.1	chr4	+	2408	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-29	3391	-18	885	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTATTTATTTCTTA	NA	False	NA	15	True	ATTAAA	-12	NA	48124896	48183116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.2	chr4	+	1518	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-18	4270	-7	6	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGTGACATGGGTGT	-13	True	NA	19	True	TATAAA	-35	NA	48124907	48182237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.3	chr4	+	2314	7	ISM	ENSMUSG00000061455.14	ENSMUST00000107721.8	1771	11	11	2794	0	886	intron_retention	FALSE	canonical	2	2	junction_2	12.1243556529821	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTATTTATTTCTTAT	5	True	NA	16	True	ATTAAA	-13	NA	48124925	48183117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48124959_48131764_48131950_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.4	chr4	+	5770	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTCCTGTTGTATATT	5	True	NA	NA	False	AATAAA	-25	NA	48124925	48186507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.5	chr4	+	3718	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	0	-1564	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCTCAGTCTACAAATG	5	True	NA	NA	False	NA	NA	NA	48124925	48184347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.7	chr4	+	5181	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	1	588	1	8	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGATCTAAGAGAATGA	6	True	NA	NA	False	NA	NA	NA	48124926	48185919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.8	chr4	+	2475	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	4	886	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTATTTATTTCTTAT	18	False	NA	16	True	ATTAAA	-13	NA	48124938	48183117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ES.23362.9	chr4	+	6547	1	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	55020	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAACTGAATTCCTGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	48179954	48186501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48180000_48186500
ES.23363.1	chr4	+	3755	16	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	-26	828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.26190128606002	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTTGAGGGAATACAGG	NA	False	NA	NA	False	AATAAA	-21	NA	48279733	48428179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48427607
ES.23363.10	chr4	+	5614	17	FSM	ENSMUSG00000028344.13	ENSMUST00000030029.10	5633	17	22	-3	-2	3	multi-exon	FALSE	canonical	1	2	junction_6	2.59506743650334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGATGCCTTTATTCC	0	True	NA	15	True	AATAAA	-22	NA	48279823	48431957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.11	chr4	+	5681	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.14252009157484	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCATCCCTGATGCCTT	25	True	NA	9	True	AATAAA	-16	NA	48279848	48431951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48372845_48372944_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.12	chr4	+	4553	17	FSM	ENSMUSG00000028344.13	ENSMUST00000030029.10	5633	17	70	1010	46	-1010	multi-exon	FALSE	canonical	1	2	junction_6	2.59506743650334	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGAGGTACCATGGTG	2	True	NA	NA	False	AATAAA	-27	NA	48279871	48430944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.13	chr4	+	5129	15	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	27982	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.17917329775256	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCCATCCCTGATGCC	NA	False	NA	7	True	AATAAA	-14	NA	48307807	48431949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48307850_48372845_48372944_48382104_48382279_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.14	chr4	+	3554	1	Intergenic	novelGene_19161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48324715	48328269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48324700_48328300
ES.23363.15	chr4	+	1804	1	Intergenic	novelGene_19162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCGTACTTTAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	48354481	48356285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48354500_48356300
ES.23363.16	chr4	+	2144	1	Genic_Genomic	ENSMUSG00000028344.13	novel	NA	NA	NA	NA	48331	708	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCACAATGTCTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	48430518	48432662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_48430500_48432700
ES.23363.2	chr4	+	4726	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	-15	-1007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.23689799816414	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGGTACCATGGTGCTT	NA	False	NA	NA	False	AATAAA	-30	NA	48279784	48430947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48333913_48334027_48382104_48382279_48385104_48385273_48389958_48390140_48392613_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.3	chr4	+	2796	13	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	0	-10644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.1446603773522	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGGTGAAAATCGGCT	-22	True	NA	NA	False	AATAAA	-14	NA	48279801	48416707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390152_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905
ES.23363.4	chr4	+	4131	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	0	-1007	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	2.8173952976066	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGGTACCATGGTGCTT	-22	True	NA	NA	False	AATAAA	-30	NA	48279801	48430947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48421558_48422052_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.5	chr4	+	4720	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	1	-1010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.14252009157484	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGAGGTACCATGGTG	-21	True	NA	NA	False	AATAAA	-27	NA	48279802	48430944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48372845_48372944_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.6	chr4	+	5744	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.23689799816414	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCCCTGATGCCTTTA	-18	True	NA	11	True	AATAAA	-18	NA	48279805	48431953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48344571_48344688_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.7	chr4	+	3582	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	4	-2115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.30983644626711	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGTTTACTCAGCGT	-18	True	NA	NA	False	NA	NA	NA	48279805	48429839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48372845_48372944_48382104_48382279_48385104_48385273_48389958_48390140_48392613_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.8	chr4	+	5127	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	2.8173952976066	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCCCTGATGCCTTTAT	-11	True	NA	12	True	AATAAA	-19	NA	48279812	48431954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48421558_48422052_48422150_48425994_48426225_48427033_48427109_48429604
ES.23363.9	chr4	+	5091	18	NNC	ENSMUSG00000028344.13	novel	5633	17	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.0189711577309	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGATGCCTTTATTCCT	-1	True	NA	16	True	AATAAA	-23	NA	48279822	48431958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392613_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48421558_48422052_48422150_48425994_48426225_48427033_48427109_48429604
ES.23364.1	chr4	+	3502	1	Intergenic	novelGene_19165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAATAAGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	48438658	48442160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48438700_48442200
ES.23365.1	chr4	+	5752	1	Antisense	novelGene_ENSMUSG00000028345.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCAGGCTAACC	NA	False	NA	NA	False	NA	NA	NA	48455299	48461051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_48455300_48461100
ES.23365.2	chr4	+	1819	2	Antisense	novelGene_ENSMUSG00000028345.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCAGGCTAACC	NA	False	NA	NA	False	NA	NA	NA	48458695	48461051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_48458714_48459250
ES.23366.1	chr4	+	1597	1	Intergenic	novelGene_19166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48465033	48466630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48465000_48466600
ES.23367.1	chr4	-	5491	1	Genic_Genomic	ENSMUSG00000028343.11	novel	NA	NA	NA	NA	2325	4114	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTTTGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	48194699	48189208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_48189200_48194700
ES.23367.10	chr4	-	1880	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-52	796	-52	371	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTGTGTTGTACTGATT	-32	True	NA	NA	False	AATAAA	-18	NA	48279610	48194118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.11	chr4	-	1809	11	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-34	370	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	213.988878215668	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTGTGTTGTACTGAT	-14	True	NA	NA	False	AATAAA	-17	NA	48279592	48194119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236977_48243476_48243550_48279383
ES.23367.12	chr4	-	9061	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	3	369	intron_retention	FALSE	canonical	3	625	junction_8	41.8497311819323	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTACTGTGTTGTACTGA	23	True	NA	NA	False	AATAAA	-16	NA	48279555	48194120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.13	chr4	-	1638	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-51	1037	-51	130	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGACAGTCTTTATCAT	-31	True	NA	5	True	AATAAA	-31	NA	48279609	48194359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.14	chr4	-	1577	12	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-25	123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.905628839803	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTCCTGGACAGTCT	-5	True	NA	-2	True	AATAAA	-24	NA	48279583	48194366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205145_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.15	chr4	-	1744	14	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	9	123	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	322.194399034544	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTCCTGGACAGTCT	29	True	NA	-2	True	AATAAA	-24	NA	48279549	48194366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48238238_48238367_48241295_48241336_48243476_48243550_48276741_48276787_48279383
ES.23367.16	chr4	-	1579	12	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-19	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	204.257777500445	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAAATCTGTCCTGGAC	1	True	NA	-7	True	AATAAA	-19	NA	48279577	48194371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208711_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.17	chr4	-	1523	12	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-53	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	202.905628839803	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATTGCATTGTCATTT	-33	True	NA	0	True	AATAAA	-42	NA	48279611	48194461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204271_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.18	chr4	-	1678	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-195	1141	-195	26	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAATTGCATTGTCAT	NA	False	NA	-2	True	AATAAA	-40	NA	48279753	48194463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.19	chr4	-	1380	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-13	26	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	206.167019670945	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAATTGCATTGTCAT	7	True	NA	-2	True	AATAAA	-40	NA	48279571	48194463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48241295_48241336_48243476_48243550_48279383
ES.23367.2	chr4	-	4951	10	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-19	2609	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	220.327533963012	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTATATTTGAGCATT	1	True	NA	NA	False	NA	NA	NA	48279577	48190713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.20	chr4	-	1426	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-33	9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	211.927440412987	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCTCCCCCTGA	-13	True	NA	-19	True	AATAAA	-23	NA	48279591	48194480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48279383
ES.23367.22	chr4	-	1594	13	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	255.833876220922	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCTCCCCCTGA	20	True	NA	-19	True	AATAAA	-23	NA	48279558	48194480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48238238_48238367_48241295_48241336_48243476_48243550_48279383
ES.23367.23	chr4	-	1446	12	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.611989178793	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCTCCCCCTGA	19	True	NA	-19	True	AATAAA	-23	NA	48279559	48194480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241324_48243485_48243550_48279383
ES.23367.3	chr4	-	2678	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	-52	-2	-52	2	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTTCCAGTTCTTAAT	-32	True	NA	NA	False	AATAAA	-31	NA	48279610	48193320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23367.30	chr4	-	3323	2	FSM	ENSMUSG00000028343.11	ENSMUST00000138743.2	442	2	-2882	1	-2882	-1	multi-exon	FALSE	canonical	3	725	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTTAATTTTTTTC	NA	False	NA	-29	True	AATAAA	-13	NA	48199906	48194490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48194710_48196802
ES.23367.31	chr4	-	1240	9	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	232.502116925847	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTTTTTAATTTTTTTC	7	True	NA	-29	True	AATAAA	-13	NA	48279571	48194490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48279383
ES.23367.32	chr4	-	5851	1	Genic_Genomic	ENSMUSG00000028343.11	novel	NA	NA	NA	NA	-3	-32819	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	17	True	NA	NA	False	NA	NA	NA	48279561	48273710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_48273700_48279600
ES.23367.4	chr4	-	2304	9	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	306.946427532558	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTATCAGCTTCCAGT	7	True	NA	NA	False	AATAAA	-24	NA	48279571	48193327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196849_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236973_48279383
ES.23367.5	chr4	-	2651	13	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	262.178731974964	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATAACTATCAGCT	27	True	NA	NA	False	AATAAA	-18	NA	48279551	48193333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48276741_48276787_48279383
ES.23367.7	chr4	-	2550	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-10	-11	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	211.927440412987	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATAACTATCAGCT	10	True	NA	NA	False	AATAAA	-18	NA	48279568	48193333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48279383
ES.23367.8	chr4	-	2521	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-25	-12	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	206.167019670945	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTAATAACTATCAGC	-5	True	NA	NA	False	AATAAA	-17	NA	48279583	48193334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48241295_48241336_48243476_48243550_48279383
ES.23367.9	chr4	-	2528	11	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	-33	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	278.343834133253	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATTTAATAACTATCAG	-13	True	NA	NA	False	AATAAA	-16	NA	48279591	48193335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48208696_48208814_48211653_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ES.23368.1	chr4	-	2708	1	Antisense	novelGene_ENSMUSG00000028344.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGTGTTGGGAGCCAC	NA	False	NA	NA	False	AGTAAA	-31	NA	48284478	48281770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_48281800_48284500
ES.23369.1	chr4	-	726	1	FSM	ENSMUSG00000081953.2	ENSMUST00000118949.2	1016	1	909	-619	909	619	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAATGTACA	NA	False	NA	NA	False	AATAAA	-17	NA	48344321	48343595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48343600_48344300
ES.2337.1	chr10	+	159	1	Intergenic	novelGene_1785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	12682354	12682513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12682400_12682500
ES.23370.1	chr4	-	228	1	Intergenic	novelGene_19163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAGAAGCTTGTG	NA	False	NA	NA	False	AAAAAG	-19	NA	48360716	48360488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48360500_48360700
ES.23371.1	chr4	-	240	1	Intergenic	novelGene_19164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGACCACGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	48406205	48405965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48406000_48406200
ES.23372.1	chr4	-	6711	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	28	3428	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTTATGTTTGTGGTG	-3	True	NA	NA	False	TATAAA	-13	NA	48473394	48427429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.10	chr4	-	5507	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	9	2924	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCTTGTAATATGTGAC	17	True	NA	NA	False	NA	NA	NA	48473413	48427933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.11	chr4	-	6734	14	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-3	2833	intron_retention	FALSE	canonical	3	662	junction_11	55.9458740963296	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTTCATTTTTAAGG	5	True	NA	NA	False	NA	NA	NA	48473425	48428024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.12	chr4	-	5534	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	42	-2474	5	2474	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAATGCTTTCCTTTGTC	13	True	NA	NA	False	AATAAA	-24	NA	48473417	48428383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.13	chr4	-	4419	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	36	-1353	-1	1353	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGAGCTCTTCCTCACCT	7	True	NA	NA	False	GATAAA	-30	NA	48473423	48429504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.14	chr4	-	3359	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	47	-304	10	304	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGACCTGACGTCGTCG	18	True	NA	NA	False	NA	NA	NA	48473412	48430553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.16	chr4	-	3223	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	-55	-66	-55	66	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCCTGGAATAGTACGA	NA	False	NA	63	True	AATAAA	-29	NA	48473514	48430791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.17	chr4	-	3369	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	1	59	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGTTTGCCTGGAAT	9	True	NA	56	True	AATAAA	-22	NA	48473421	48430798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.18	chr4	-	2923	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	8	52	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	221.933548613093	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCTCACACTGTTTGC	-21	True	NA	49	True	AATAAA	-15	NA	48473451	48430805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.19	chr4	-	2878	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	10	50	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	246.357349956422	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGCTCTCACACTGTTT	18	True	NA	47	True	AATAAA	-13	NA	48473412	48430807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473019
ES.23372.2	chr4	-	6248	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	-10	-3136	-10	3136	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATGTTAAAGTTCAT	NA	False	NA	10	True	ATTAAA	-41	NA	48473469	48427721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.20	chr4	-	3076	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	206.577961267974	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-14	True	NA	-3	True	ATTAAA	-18	NA	48473444	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459376_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.21	chr4	-	3601	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	43	junction_10	210.822776415537	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	13	True	NA	-3	True	ATTAAA	-18	NA	48473417	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.23	chr4	-	4324	13	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_5	270.622379381717	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-4	True	NA	-3	True	ATTAAA	-18	NA	48473395	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452086_48452892_48452982_48456733_48456912_48458537_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.24	chr4	-	2849	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_13	201.717080616008	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	-21	True	NA	-3	True	ATTAAA	-18	NA	48473451	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468749_48469883_48470073_48473265
ES.23372.25	chr4	-	4146	14	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	139	junction_13	177.942880270758	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	6	True	NA	-3	True	ATTAAA	-18	NA	48473424	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.26	chr4	-	2905	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	204.52444841632	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	6	True	NA	-3	True	ATTAAA	-18	NA	48473424	48430857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48434933_48436447_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.27	chr4	-	2634	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	NA	False	NA	-5	True	ATTAAA	-16	NA	48473466	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.28	chr4	-	2661	12	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	300.135423979364	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	5	True	NA	-5	True	ATTAAA	-16	NA	48473425	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48436436_48436518_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.29	chr4	-	2630	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	269.793420594199	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	NA	False	NA	-5	True	ATTAAA	-16	NA	48473468	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470067_48473265
ES.23372.30	chr4	-	3958	14	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	50	junction_3	197.004099918289	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	-8	True	NA	-5	True	ATTAAA	-16	NA	48473438	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48470073_48473265
ES.23372.31	chr4	-	5718	10	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	14	-2	intron_retention	FALSE	canonical	3	6	junction_4	251.629798624002	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	22	True	NA	-5	True	ATTAAA	-16	NA	48473408	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48456733_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48470073_48473265
ES.23372.32	chr4	-	3285	16	NNC	ENSMUSG00000028345.16	novel	3203	16	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	268.882328661938	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCATGAGCTTCCTTCA	-8	True	NA	-5	True	ATTAAA	-16	NA	48473438	48430859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48457588_48457795_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.33	chr4	-	3479	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.606377944574	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	-16	True	NA	-6	True	ATTAAA	-15	NA	48473446	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452453_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.34	chr4	-	3030	14	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-12	-3	combination_of_known_splicesites	FALSE	canonical	2	18	junction_3	206.903316185412	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	NA	False	NA	-6	True	ATTAAA	-15	NA	48473471	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.35	chr4	-	2353	14	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	214.835481295964	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	11	True	NA	-6	True	ATTAAA	-15	NA	48473419	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462871_48468734_48468994_48469883_48470073_48473265
ES.23372.36	chr4	-	7845	14	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	662	junction_11	55.1545434995074	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	7	True	NA	-6	True	ATTAAA	-15	NA	48473423	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.37	chr4	-	4683	14	NIC	ENSMUSG00000028345.16	novel	3203	16	NA	NA	1020	-3	intron_retention	FALSE	canonical	3	43	junction_12	201.958341243023	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	1107	False	NA	-6	True	ATTAAA	-15	NA	48472323	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883
ES.23372.38	chr4	-	3051	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	205.946545471966	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	13	True	NA	-6	True	ATTAAA	-15	NA	48473417	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468988_48469883_48470073_48473265
ES.23372.39	chr4	-	4761	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	14	-3	intron_retention	FALSE	canonical	3	43	junction_10	208.429577768821	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	22	True	NA	-6	True	ATTAAA	-15	NA	48473408	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48436518_48451925_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.4	chr4	-	5701	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	2	3111	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTTTTCCCCACCAA	10	True	NA	-15	True	ATTAAA	-16	NA	48473420	48427746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.40	chr4	-	3008	16	NNC	ENSMUSG00000028345.16	novel	3203	16	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	200.717202938751	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATGAGCTTCCTTC	NA	False	NA	-6	True	ATTAAA	-15	NA	48473469	48430860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467698_48467798_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.42	chr4	-	3131	11	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	4660	-6	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	220.935488321818	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	9166	False	NA	-9	True	ATTAAA	-12	NA	48464264	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768
ES.23372.43	chr4	-	2670	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	14	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	223.119362673884	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	22	True	NA	-9	True	ATTAAA	-12	NA	48473408	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.46	chr4	-	2499	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	259.510764198123	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	1	True	NA	-9	True	ATTAAA	-12	NA	48473346	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.48	chr4	-	3951	14	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	662	junction_12	54.6576218042989	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	6	True	NA	-9	True	ATTAAA	-12	NA	48473424	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48470073_48473265
ES.23372.49	chr4	-	3098	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	207.299854297674	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	-25	True	NA	-9	True	ATTAAA	-12	NA	48473455	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451919_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.5	chr4	-	6136	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	205	3109	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGCTTTTCCCCACC	292	False	NA	-17	True	ATTAAA	-14	NA	48473138	48427748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.50	chr4	-	3021	14	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	211.553034463069	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	20	True	NA	-9	True	ATTAAA	-12	NA	48473410	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435125_48451911_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.51	chr4	-	3042	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	260.979395542942	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	10	True	NA	-9	True	ATTAAA	-12	NA	48473420	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436514_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.52	chr4	-	2581	16	NNC	ENSMUSG00000028345.16	novel	3203	16	NA	NA	8	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	344.744543104021	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	-21	True	NA	-9	True	ATTAAA	-12	NA	48473451	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48463173_48463285_48467663_48467905_48468753_48468849_48469883_48470073_48473265
ES.23372.54	chr4	-	3566	11	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	1080	-6	intron_retention	FALSE	canonical	3	721	junction_7	48.5490473644952	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	5586	False	NA	-9	True	ATTAAA	-12	NA	48467844	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663
ES.23372.55	chr4	-	4775	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	7	-6	intron_retention	FALSE	canonical	3	662	junction_11	56.5999607381097	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	15	True	NA	-9	True	ATTAAA	-12	NA	48473415	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48470073_48473265
ES.23372.56	chr4	-	2930	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	204.453078295461	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	-8	True	NA	-9	True	ATTAAA	-12	NA	48473438	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468849_48469883_48470073_48473265
ES.23372.57	chr4	-	2521	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	205.946545471966	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	18	True	NA	-9	True	ATTAAA	-12	NA	48473412	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468466_48469883_48470073_48473265
ES.23372.58	chr4	-	5143	11	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-37	-6	intron_retention	FALSE	canonical	3	6	junction_4	288.10624776287	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	50	False	NA	-9	True	ATTAAA	-12	NA	48473380	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48456733_48458714_48459250_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.59	chr4	-	2380	13	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-17	-6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	290.168760762116	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	-9	True	NA	-9	True	ATTAAA	-12	NA	48473439	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
ES.23372.6	chr4	-	5548	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	8	3109	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	268.68581340765	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGCTTTTCCCCACC	16	True	NA	-17	True	ATTAAA	-14	NA	48473414	48427748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468849_48469883_48470073_48473265
ES.23372.62	chr4	-	4307	10	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	4328	-6	intron_retention	FALSE	canonical	3	721	junction_7	48.1179107332533	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	8834	False	NA	-9	True	ATTAAA	-12	NA	48464596	48430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768
ES.23372.63	chr4	-	5763	5	ISM	ENSMUSG00000028345.16	ENSMUST00000155905.8	2547	13	11929	7	2308	-7	intron_retention	FALSE	canonical	3	775	junction_4	38.7774096607806	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGTTCATGAGCTTC	NA	False	NA	-10	True	ATTAAA	-11	NA	48456995	48430864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925
ES.23372.64	chr4	-	3019	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	29	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	205.983170007966	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGTTCATGAGCTTC	-2	True	NA	-10	True	ATTAAA	-11	NA	48473393	48430864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470081_48473283
ES.23372.66	chr4	-	3030	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	-12	84	-12	14	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTGTTCATGCACATT	NA	False	NA	-3	True	ATTAAA	-28	NA	48473471	48430941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.67	chr4	-	2964	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	204.52444841632	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTGAAGTTAATTGTT	9	True	NA	-13	True	ATTAAA	-18	NA	48473421	48430951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435078_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.68	chr4	-	3232	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_14	171.623282279556	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCCTGTTTGAAGTTAA	-12	True	NA	-18	True	ATTAAA	-13	NA	48473442	48430956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473019
ES.23372.69	chr4	-	1564	5	NNC	ENSMUSG00000028345.16	novel	551	3	NA	NA	2	974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	339.734731077057	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGTTATGGATTTGTA	10	True	NA	NA	False	AATAAA	-15	NA	48473420	48466732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48466999_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.7	chr4	-	5989	13	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	-16	3105	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	283.147819168716	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTACTCTGCTTTTCCC	NA	False	NA	-21	True	ATTAAA	-10	NA	48473475	48427752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436518_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23372.9	chr4	-	6005	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	25	-2928	-12	2928	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAATATGTGACAGTT	-4	True	NA	NA	False	NA	NA	NA	48473434	48427929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ES.23373.1	chr4	+	5324	1	Intergenic	novelGene_19167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	17	True	NA	NA	NA	48513698	48519022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48513700_48519000
ES.23373.10	chr4	+	1663	1	Intergenic	novelGene_19175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCCACTGTGTAAAT	NA	False	NA	NA	False	NA	NA	NA	48517701	48519364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48517700_48519400
ES.23373.11	chr4	+	1628	3	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	-64	6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	150	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTATGTTTTTAAA	NA	False	NA	21	True	NA	NA	NA	48539870	48561925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48539966_48552379_48552831_48560843
ES.23373.12	chr4	+	1677	4	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.78531435144	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	3	True	NA	14	True	NA	NA	NA	48539919	48561918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48539998_48549924_48549998_48552379_48552831_48560843
ES.23373.13	chr4	+	5687	6	NNC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	19	3972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.893850560578	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTCGTCATGGAT	37	False	NA	NA	False	NA	NA	NA	48539953	48565891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540272_48549921_48549998_48552379_48552831_48560843_48562218_48562352_48564473_48564543
ES.23373.14	chr4	+	1842	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	-122	-342	22	0	multi-exon	FALSE	canonical	3	126	junction_1	89	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	40	False	NA	15	True	NA	NA	NA	48539956	48561919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48540272_48552379_48552831_48560843
ES.23373.15	chr4	+	1552	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	37	0	37	0	multi-exon	FALSE	canonical	3	23	junction_1	140.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	55	False	NA	14	True	NA	NA	NA	48539971	48561918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48539998_48552379_48552831_48560843
ES.23373.16	chr4	+	5485	5	NNC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	2	3973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.26278051803	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTCGTCATGGATG	4	True	NA	NA	False	NA	NA	NA	48540080	48565892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540272_48552379_48552831_48560843_48562218_48562352_48564473_48564543
ES.23373.17	chr4	+	1351	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	40	-13	40	13	multi-exon	FALSE	canonical	3	126	junction_1	89	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTAGTGGGTTTTTGT	-10	True	NA	78	True	GATAAA	-27	NA	48540118	48561590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48540272_48552379_48552831_48560843
ES.23373.18	chr4	+	1746	4	NIC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	52	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	136.514549489138	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACACTGTGTATGTTTT	2	True	NA	17	True	NA	NA	NA	48540130	48561921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48540272_48549921_48549998_48552379_48552831_48560843
ES.23373.19	chr4	+	2587	11	Fusion	ENSMUSG00000039693.12_ENSMUSG00000028347.15	novel	489	5	NA	NA	52	-1	multi-exon	FALSE	canonical	0	0	junction_2	182.74411071222	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTGCTTTGTGTGCTC	2	True	NA	NA	False	AATATA	-14	NA	48540130	48663130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_48540272_48552379_48552831_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.2	chr4	+	596	2	Intergenic	novelGene_19168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513711	48519021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48514080_48518793
ES.23373.20	chr4	+	5500	4	NNC	ENSMUSG00000039693.12	novel	1378	3	NA	NA	57	3972	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_3	120.534918868628	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTCGTCATGGAT	7	True	NA	NA	False	NA	NA	NA	48540135	48565891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540272_48552379_48552831_48560843_48562218_48562352
ES.23373.21	chr4	+	1849	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-246	-6	174	6	multi-exon	FALSE	canonical	3	153	junction_1	75.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTATGTTTTTAAA	93	False	NA	21	True	NA	NA	NA	48540252	48561925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48540569_48552379_48552831_48560843
ES.23373.22	chr4	+	1894	4	NIC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	197	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	134.127634073752	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTTACACTGTGTATG	116	False	NA	13	True	NA	NA	NA	48540275	48561917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48540569_48549921_48549998_48552379_48552831_48560843
ES.23373.23	chr4	+	1796	3	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	203	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTTGGTTTTTTTT	122	False	NA	10	True	NA	NA	NA	48540281	48561522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540948_48552379_48552831_48560843
ES.23373.24	chr4	+	1434	4	NIC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-165	-62	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	134.127634073752	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTGTGAGTGTTGGT	174	False	NA	3	True	NA	NA	NA	48540333	48561515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48540569_48549921_48549998_48552379_48552831_48560843
ES.23373.26	chr4	+	1320	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-120	397	-120	-55	multi-exon	FALSE	canonical	3	153	junction_1	75.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGTTGGTTTTTTTT	21	False	NA	10	True	NA	NA	NA	48540378	48561522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48540569_48552379_48552831_48560843
ES.23373.27	chr4	+	5624	5	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-117	3969	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	124.529865895696	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACATTGCTGTCGTCATG	-15	True	NA	NA	False	NA	NA	NA	48540381	48565888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48549921_48549998_48552379_48552831_48560843_48562218_48562352
ES.23373.28	chr4	+	2364	4	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-106	796	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_3	119.635557701992	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTCCATTATTTTAGA	-4	True	NA	NA	False	TTTAAA	-12	NA	48540392	48562715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48552379_48552831_48560843_48562218_48562352
ES.23373.29	chr4	+	5506	4	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-72	3972	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_3	119.635557701992	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTCGTCATGGAT	-34	True	NA	NA	False	NA	NA	NA	48540426	48565891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48552379_48552831_48560843_48562218_48562352
ES.23373.3	chr4	+	4891	2	Intergenic	novelGene_19169	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513711	48519021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48514080_48514498
ES.23373.30	chr4	+	5436	5	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-72	3973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	123.68306270464	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTCGTCATGGATG	-34	True	NA	NA	False	NA	NA	NA	48540426	48565892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48552379_48552831_48560843_48562218_48562352_48564473_48564543
ES.23373.31	chr4	+	4197	5	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-71	3963	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.8189787022289	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTGACATTGCTGTC	-33	True	NA	NA	False	NA	NA	NA	48540427	48565882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48552379_48552831_48560836_48562218_48562352_48563502_48564807
ES.23373.33	chr4	+	5357	5	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-1	3963	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	126.107840755442	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTGACATTGCTGTC	37	True	NA	NA	False	NA	NA	NA	48540497	48565882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48540569_48552379_48552831_48560843_48562228_48562360_48564473_48564543
ES.23373.34	chr4	+	3450	1	NIC	ENSMUSG00000039693.12	novel	273	3	NA	NA	8296	-262	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACCAAGGTAGGGATTAA	8381	False	NA	NA	False	NA	NA	NA	48548841	48552291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48548800_48552300
ES.23373.35	chr4	+	1780	2	ISM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	11897	-269	-7551	269	3prime_fragment	FALSE	canonical	3	304	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGGTGCTTCTGCTG	NA	False	NA	NA	False	CATAAA	-15	NA	48552395	48562188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48552831_48560843
ES.23373.36	chr4	+	2565	10	FSM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-473	-666	-96	5	multi-exon	FALSE	canonical	3	335	junction_4	69.1178989163971	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGTGCTCATTTAT	NA	False	NA	NA	False	AATATA	-20	NA	48585077	48663136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.38	chr4	+	2598	11	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-75	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	205.28733521579	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACGGTCTGCTTTGTGTG	-9	True	NA	NA	False	AATATA	-11	NA	48585098	48663127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48604821_48604885_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.4	chr4	+	3741	2	Intergenic	novelGene_19170	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513788	48519021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48517472_48518963
ES.23373.40	chr4	+	2536	10	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-75	3	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	136.341075574784	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGTGTGCTCATTT	-9	True	NA	NA	False	AATATA	-18	NA	48585098	48663134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
ES.23373.41	chr4	+	4766	9	NIC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	-58	-4	intron_retention	FALSE	canonical	3	418	junction_6	46.4608370027919	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACGGTCTGCTTTGTGTG	8	True	NA	NA	False	AATATA	-11	NA	48585115	48663127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.42	chr4	+	2308	8	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.858405617759	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTCTGCTTTGTGTGC	-18	True	NA	NA	False	AATATA	-12	NA	48585143	48663128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604665_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.43	chr4	+	5560	9	ISM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-406	-660	-29	-1	intron_retention	FALSE	canonical	3	335	junction_4	73.0068489937759	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTGCTTTGTGTGCTC	-17	True	NA	NA	False	AATATA	-14	NA	48585144	48663130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773
ES.23373.44	chr4	+	2298	11	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	159.926983339273	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACGGTCTGCTTTGTGTG	-5	True	NA	NA	False	AATATA	-11	NA	48585156	48663127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000_48662548_48662726
ES.23373.45	chr4	+	4914	11	Fusion	ENSMUSG00000028347.15_ENSMUSG00000028348.8	novel	1426	10	NA	NA	-17	-3	multi-exon	TRUE	canonical	0	0	junction_10	159.926983339273	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTGCATGGGTGCCT	-5	True	NA	NA	False	AATAAA	-12	NA	48585156	48673499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000_48664030_48671964
ES.23373.46	chr4	+	1994	6	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.625329798016	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTGCTTTGTGTGCTC	13	True	NA	NA	False	AATATA	-14	NA	48585174	48663130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48636934_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
ES.23373.47	chr4	+	2318	11	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	159.926983339273	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTGCTTTGTGTGCTC	13	True	NA	NA	False	AATATA	-14	NA	48585174	48663130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000_48662867_48663010
ES.23373.48	chr4	+	2440	9	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.989538119394	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACGGTCTGCTTTGTGTG	16	True	NA	NA	False	AATATA	-11	NA	48585177	48663127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610547_48617224_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.49	chr4	+	2420	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	4	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.678137252305	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATGTTATAATATAAT	16	True	NA	NA	False	TTTAAA	-33	NA	48585177	48663099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617239_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.5	chr4	+	689	4	Intergenic	novelGene_19172	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	9.93310961716756	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTCTTGGTTCCTTC	NA	False	NA	18	True	NA	NA	NA	48513808	48519023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48514080_48514498_48514586_48516958_48517060_48518793
ES.23373.50	chr4	+	1362	5	ISM	ENSMUSG00000028347.15	ENSMUST00000130834.8	1426	10	-343	44578	34	-42347	5prime_fragment	FALSE	canonical	3	335	junction_4	67.0410322116239	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCTGTTTTTTTAAGAA	1	True	NA	NA	False	AATAAA	-13	NA	48585207	48617892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231
ES.23373.51	chr4	+	3410	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	-83	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	184.684582631384	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTCTGCTTTGTGTGC	-21	True	NA	NA	False	AATATA	-12	NA	48585281	48663128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48660940
ES.23373.53	chr4	+	2320	9	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-54	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.989538119394	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTCTGCTTTGTGTGC	8	True	NA	NA	False	AATATA	-12	NA	48585310	48663128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610566_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.54	chr4	+	2306	9	NNC	ENSMUSG00000028347.15	novel	1426	10	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.989538119394	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTCTGCTTTGTGTGCTC	12	True	NA	NA	False	AATATA	-14	NA	48585314	48663130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585642_48604580_48604691_48610412_48610554_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.56	chr4	+	2052	10	NNC	ENSMUSG00000028347.15	novel	489	5	NA	NA	264	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.906124276456	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTCTGCTTTGTGTGCT	512	False	NA	NA	False	AATATA	-13	NA	48585814	48663129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48585873_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.57	chr4	+	823	1	Intergenic	novelGene_19180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTTCTACAGTGGTC	4427	False	NA	NA	False	NA	NA	NA	48623357	48624180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48623400_48624200
ES.23373.58	chr4	+	183	1	Intergenic	novelGene_19181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCTGGCTTGCTCATG	9222	False	NA	NA	False	NA	NA	NA	48628152	48628335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48628200_48628300
ES.23373.59	chr4	+	1486	4	ISM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	53803	-3	2043	3	3prime_fragment	FALSE	canonical	3	418	junction_1	56.5351414805183	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTGTGTGCTCATTT	2075	False	NA	NA	False	AATATA	-18	NA	48638976	48663134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48639046_48650294_48650419_48658773_48658933_48662000
ES.23373.6	chr4	+	2871	1	Intergenic	novelGene_19171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGAAAGTGCAATTAGT	NA	False	NA	NA	False	NA	NA	NA	48513808	48516679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48513800_48516700
ES.23373.60	chr4	+	1414	3	ISM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	65118	3	13358	-3	3prime_fragment	FALSE	canonical	3	504	junction_2	25.5	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTCTGCTTTGTGTGC	NA	False	NA	NA	False	AATATA	-12	NA	48650291	48663128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_48650419_48658773_48658933_48662000
ES.23373.61	chr4	+	6046	2	Intergenic	novelGene_19182	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	48652001	48658097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48655758_48655807
ES.23373.62	chr4	+	3078	1	Intergenic	novelGene_19183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	48655019	48658097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48655000_48658100
ES.23373.63	chr4	+	829	2	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	25172	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTTTGTGTGCTCAT	4063	False	NA	NA	False	AATATA	-16	NA	48662105	48663132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48662290_48662487
ES.23373.64	chr4	+	210	1	Intergenic	novelGene_19185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCCCTGCCCTGGGGT	NA	False	NA	NA	False	AAAAAG	-11	NA	48697056	48697266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48697100_48697300
ES.23373.7	chr4	+	545	3	Intergenic	novelGene_19173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	1.5	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513849	48519021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48514080_48514498_48514586_48518793
ES.23373.8	chr4	+	5520	5	NNC	ENSMUSG00000039693.12	novel	1589	3	NA	NA	-26081	3973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.125660420995	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTCGTCATGGATG	NA	False	NA	NA	False	NA	NA	NA	48513853	48565892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_48514080_48552379_48552831_48560843_48562218_48562352_48564473_48564543
ES.23373.9	chr4	+	158	2	Intergenic	novelGene_19174	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	194	junction_1	0	799	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	48516479	48697216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48516530_48697108
ES.23374.1	chr4	-	144	1	Intergenic	novelGene_19176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48550391	48550247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48550200_48550400
ES.23375.1	chr4	-	227	1	Intergenic	novelGene_19177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATACATAAAATAAAAATA	NA	False	NA	NA	False	TATAAA	-22	NA	48558345	48558118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48558100_48558300
ES.23376.1	chr4	-	193	1	Intergenic	novelGene_19178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGTTCTGCATATAT	NA	False	NA	-6	True	AATAAA	-13	NA	48579023	48578830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48578800_48579000
ES.23377.1	chr4	-	2703	1	Intergenic	novelGene_19179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCACCATGAGACAGTCT	NA	False	NA	NA	False	NA	NA	NA	48585009	48582306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48582300_48585000
ES.23378.1	chr4	-	2483	2	Antisense	novelGene_ENSMUSG00000028347.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	48591326	48588647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_48590647_48590842
ES.23379.1	chr4	-	197	1	Intergenic	novelGene_19184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAGATATATTTAAGCG	NA	False	NA	NA	False	NA	NA	NA	48666546	48666349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48666300_48666500
ES.2338.1	chr10	+	176	1	Intergenic	novelGene_1786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	12725784	12725960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12725800_12726000
ES.23380.1	chr4	-	176	1	Intergenic	novelGene_19186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAATACACAGGAG	NA	False	NA	NA	False	NA	NA	NA	48763235	48763059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_48763100_48763200
ES.23381.1	chr4	+	157	1	Intergenic	novelGene_19187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	48836950	48837107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_48837000_48837100
ES.23382.1	chr4	-	151	1	Intergenic	novelGene_19188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	49231011	49230860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49230900_49231000
ES.23383.1	chr4	-	177	1	Intergenic	novelGene_19189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	49234610	49234433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49234400_49234600
ES.23384.1	chr4	-	3693	3	NNC	ENSMUSG00000044018.4	novel	2114	2	NA	NA	25	25840	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	640.5	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGTTCCCACCTGT	-6	True	NA	NA	False	NA	NA	NA	49521068	49486755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_49487087_49511322_49514578_49520961
ES.23384.10	chr4	-	1312	2	NNC	ENSMUSG00000044018.4	novel	2114	2	NA	NA	19	-777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTCAAAGATATGGGG	-12	True	NA	-12	True	AATAAA	-11	NA	49521074	49513372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_49514572_49520961
ES.23384.11	chr4	-	732	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	11	1371	11	-1371	multi-exon	FALSE	canonical	3	1281	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACTTTGTTATTCCA	-20	True	NA	-7	True	AATAAA	-19	NA	49521082	49513966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23384.13	chr4	-	446	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	16	1652	16	-1652	multi-exon	FALSE	canonical	3	1281	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAACTCGTTGCTAGTA	-15	True	NA	NA	False	NA	NA	NA	49521077	49514247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23384.2	chr4	-	3621	5	Fusion	ENSMUSG00000039653.10_ENSMUSG00000044018.4	novel	1941	4	NA	NA	13	3	multi-exon	FALSE	non_canonical	0	0	junction_1	554.689271123933	324	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGCTGTCATTGAATA	-18	True	NA	NA	False	ATTAAA	-13	NA	49521080	49489418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_49490414_49499635_49499839_49502654_49503172_49512790_49514578_49520961
ES.23384.3	chr4	-	3896	1	Intergenic	novelGene_19190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAGGAGAAGGAGGAG	9188	False	NA	NA	False	NA	NA	NA	49511874	49507978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49508000_49511900
ES.23384.4	chr4	-	2195	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	-2	-79	-2	79	multi-exon	FALSE	canonical	3	1281	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTAAGCATGGGCGA	NA	False	NA	79	True	TATAAA	-13	NA	49521095	49512516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23384.6	chr4	-	2089	2	NNC	ENSMUSG00000044018.4	novel	2114	2	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGTTTTAAAGTGTTA	-15	True	NA	-2	True	AATAAA	-19	NA	49521077	49512597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_49514571_49520961
ES.23384.7	chr4	-	2076	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	15	23	15	-23	multi-exon	FALSE	canonical	3	1281	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAATGTCTAGCAG	-16	True	NA	-23	True	AATGAA	-11	NA	49521078	49512618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23384.8	chr4	-	1577	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	16	521	16	-521	multi-exon	FALSE	canonical	3	1281	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGAGTTGTTGATTGTT	-15	True	NA	NA	False	NA	NA	NA	49521077	49513116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23384.9	chr4	-	1340	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	5	769	5	-769	multi-exon	FALSE	canonical	3	1281	junction_1	0	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATGGGGCTATTATA	-26	True	NA	-4	True	AATAAA	-19	NA	49521088	49513364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_49514578_49520961
ES.23385.1	chr4	+	5077	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	34	-2276	-7	2276	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACAGTTTGTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	49521209	49533793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
ES.23385.2	chr4	+	2975	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	46	-186	5	186	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCATTATTTGCT	-34	True	NA	NA	False	ATTAAA	-16	NA	49521221	49531703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
ES.23385.3	chr4	+	3139	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	12	-186	12	186	multi-exon	FALSE	canonical	3	41	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCATTATTTGCT	-27	True	NA	NA	False	ATTAAA	-16	NA	49521228	49531703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521596_49522397_49522483_49529016
ES.23385.4	chr4	+	2808	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	53	-26	12	26	multi-exon	FALSE	canonical	1	1	junction_1	22.553639765383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTAGAAAGCTGAGATG	-27	True	NA	NA	False	AATAAA	-18	NA	49521228	49531543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
ES.23385.5	chr4	+	2979	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	13	-27	13	27	multi-exon	FALSE	canonical	3	41	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGAAAGCTGAGATGT	-26	True	NA	NA	False	AATAAA	-19	NA	49521229	49531544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521596_49522397_49522483_49529016
ES.23385.6	chr4	+	5220	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	24	-2279	24	2279	multi-exon	FALSE	canonical	3	41	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTTTGTTTTCTGTCTC	-15	True	NA	NA	False	ATTAAA	-17	NA	49521240	49533796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521596_49522397_49522483_49529016
ES.23385.7	chr4	+	2750	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	28	187	28	-187	multi-exon	FALSE	canonical	3	41	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCTTTGGGAGTGCCTT	-11	True	NA	NA	False	AATAAA	-12	NA	49521244	49531330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49521596_49522397_49522483_49529016
ES.23385.8	chr4	+	5855	2	NNC	ENSMUSG00000039634.13	novel	2965	3	NA	NA	7953	8206	intron_retention	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGGCAGTGCTCCAGG	7914	False	NA	NA	False	NA	NA	NA	49529169	49539723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49530283_49534981
ES.23386.1	chr4	+	3300	1	Intergenic	novelGene_19191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49626347	49629647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_49626300_49629600
ES.23387.1	chr4	-	2042	3	NNC	ENSMUSG00000039611.3	novel	2989	2	NA	NA	-34074	-917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTGTGTCAGTTGTCT	1	True	NA	-3	True	AATAAA	-11	NA	49631950	49585422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_49587242_49630736_49630864_49631854
ES.23387.2	chr4	-	130	1	Intergenic	novelGene_19192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAATAAAAAAT	705	False	NA	NA	False	NA	NA	NA	49631246	49631116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49631100_49631200
ES.23388.1	chr4	+	8454	18	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	-29	0	intron_retention	FALSE	canonical	2	4	junction_1	22.7002431278232	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	NA	False	NA	4	True	ATTAAA	-16	NA	49631976	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49632034_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.10	chr4	+	4144	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.0668869576114	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	23	False	NA	3	True	ATTAAA	-15	NA	49632027	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638670_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.11	chr4	+	4132	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	22.0165278824796	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	-15	True	NA	4	True	ATTAAA	-16	NA	49632063	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632490_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.12	chr4	+	8666	18	NNC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	23.1412093662854	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	-14	True	NA	3	True	ATTAAA	-15	NA	49632064	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638334_49638624_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.13	chr4	+	8479	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	0	4326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	22.0668869576114	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGTCCATAAGTGTTG	-13	True	NA	NA	False	ATTAAA	-21	NA	49632065	49661213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638334_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.14	chr4	+	4361	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	2	-209	2	209	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACAGCATTTAGTTTGTT	-11	True	NA	NA	False	ATTAAA	-19	NA	49632067	49657096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.2	chr4	+	4052	21	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21.395969246566	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTTGTGGTGTTCTT	NA	False	NA	6	True	ATTAAA	-18	NA	49631990	49656888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49632034_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.21	chr4	+	7263	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	21	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.3849838061143	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGTTGCTCTTGTGTTT	35	False	NA	-5	True	ATTAAA	-7	NA	49632113	49656877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49641975_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.23	chr4	+	489	3	NNC	ENSMUSG00000028309.15	novel	1904	6	NA	NA	-3440	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGTTTTGGGGTTCT	6141	False	NA	NA	False	AATAAA	-9	NA	49638277	49640034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49638335_49638624_49638808_49639785
ES.23388.24	chr4	+	5218	15	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	7985	1	-1667	0	3prime_fragment	FALSE	canonical	3	53	junction_1	15.1524565261053	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	7914	False	NA	4	True	ATTAAA	-16	NA	49640050	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.25	chr4	+	3246	16	NNC	ENSMUSG00000028309.15	novel	966	5	NA	NA	227	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.51699149315	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	9808	False	NA	3	True	ATTAAA	-15	NA	49641944	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49641975_49642051_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.26	chr4	+	6371	13	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	582	0	intron_retention	FALSE	canonical	3	56	junction_5	14.9468967422078	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	NA	False	NA	4	True	ATTAAA	-16	NA	49642299	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.27	chr4	+	4524	14	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	10977	2	1325	-1	3prime_fragment	FALSE	canonical	3	56	junction_5	14.4201535498887	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	NA	False	NA	3	True	ATTAAA	-15	NA	49643042	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.28	chr4	+	4796	13	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	1447	0	intron_retention	FALSE	canonical	3	56	junction_5	14.9712687801966	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	NA	False	NA	4	True	ATTAAA	-16	NA	49643164	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.3	chr4	+	4213	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	-54	-5	6	5	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGGTGTTCTTTGTT	7	False	NA	10	True	ATTAAA	-22	NA	49632011	49656892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.30	chr4	+	2594	9	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	-899	-1	intron_retention	FALSE	canonical	3	56	junction_1	14.6239315849056	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	NA	False	NA	3	True	ATTAAA	-15	NA	49649363	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654588_49655410_49655513_49655800
ES.23388.31	chr4	+	3663	8	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	18138	-1602	-59	1602	3prime_fragment	FALSE	canonical	3	79	junction_6	9.437225465665	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGCGGTGTTTATTC	102	False	NA	NA	False	AATAAA	-22	NA	49650203	49658489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.32	chr4	+	3984	5	NIC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	161	-2	intron_retention	FALSE	canonical	3	79	junction_3	11.27774356864	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTGTGTTTGTGGTGT	322	False	NA	2	True	ATTAAA	-14	NA	49650423	49656884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49651549_49652521_49652672_49653064_49654588_49655410_49655513_49655800
ES.23388.33	chr4	+	1023	1	Genic_Genomic	ENSMUSG00000028309.15	novel	NA	NA	NA	NA	5326	429	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCTCCTGATAATGGTC	6192	False	NA	NA	False	AATAAA	-17	NA	49656293	49657316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_49656300_49657300
ES.23388.4	chr4	+	4325	20	NNC	ENSMUSG00000028309.15	novel	4312	20	NA	NA	17	-1	intron_retention	FALSE	canonical	2	2	junction_1	22.1341915974614	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTTTGTGGTGTT	18	False	NA	3	True	ATTAAA	-15	NA	49632022	49656885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632490_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.5	chr4	+	4350	20	FSM	ENSMUSG00000028309.15	ENSMUST00000167496.8	4312	20	-37	-1	17	0	multi-exon	FALSE	canonical	3	48	junction_4	16.450883834839	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTGTGGTGTTCT	18	False	NA	5	True	ATTAAA	-17	NA	49632022	49656887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.6	chr4	+	4184	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.1139661752477	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGTGTTTGTGGTG	18	False	NA	1	True	ATTAAA	-13	NA	49632022	49656883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653073_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23388.7	chr4	+	7835	17	NIC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	20	-3	intron_retention	FALSE	canonical	3	46	junction_1	17.129903495058	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGTGTTTGTGGTG	21	False	NA	1	True	ATTAAA	-13	NA	49632025	49656883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49653278_49654190_49655513_49655800
ES.23388.8	chr4	+	3882	6	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	20	-1237	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	18.4325798519903	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGCTTAGAAATCTT	21	False	NA	NA	False	AATAAA	-19	NA	49632025	49641722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632490_49633253_49633411_49637905_49638074_49638186_49638335_49638624
ES.23388.9	chr4	+	4122	21	NNC	ENSMUSG00000028309.15	novel	4154	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.0093733104048	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	23	False	NA	4	True	ATTAAA	-16	NA	49632027	49656886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_49632212_49632364_49632490_49633253_49633411_49637905_49638074_49638186_49638335_49638670_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ES.23389.1	chr4	-	187	1	Intergenic	novelGene_19193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAACTGCATC	NA	False	NA	NA	False	NA	NA	NA	49655181	49654994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49655000_49655200
ES.2339.1	chr10	+	3061	1	Intergenic	novelGene_1787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAAATTTGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	12729499	12732560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12729500_12732600
ES.23390.1	chr4	-	151	1	Intergenic	novelGene_19194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	49794531	49794380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_49794400_49794500
ES.23391.1	chr4	+	166	1	Intergenic	novelGene_19195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	50320541	50320707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_50320500_50320700
ES.23392.1	chr4	+	177	1	Intergenic	novelGene_19196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51782153	51782330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51782200_51782300
ES.23393.1	chr4	+	8069	1	Intergenic	novelGene_19197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	51871716	51879785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51871700_51879800
ES.23393.2	chr4	+	7530	3	Intergenic	novelGene_19198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATCAAGGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	51871717	51879776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51871937_51872150_51872299_51872613
ES.23393.3	chr4	+	2740	2	Intergenic	novelGene_19199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGTGTTGTGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	51871721	51879780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51871937_51877255
ES.23393.4	chr4	+	6051	2	Intergenic	novelGene_19200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	51873513	51879785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51873746_51873966
ES.23393.5	chr4	+	4260	2	Intergenic	novelGene_19201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAAGGTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	51875124	51879777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51876863_51877255
ES.23393.6	chr4	+	2974	2	Intergenic	novelGene_19202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	51876035	51879781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_51878833_51879604
ES.23394.1	chr4	+	176	1	Intergenic	novelGene_19203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATTAA	NA	False	NA	NA	False	NA	NA	NA	52071738	52071914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_52071700_52071900
ES.23395.1	chr4	-	6261	1	Intergenic	novelGene_19204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATCCTTAATCATCAGG	NA	False	NA	NA	False	NA	NA	NA	52087176	52080915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_52080900_52087200
ES.23396.1	chr4	+	5547	26	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-13781	105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.2459349790941	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTCTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	52425461	52488365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52425508_52439250_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.10	chr4	+	5163	25	NNC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	-2	-169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	116.007176202835	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGAATTGCTGTCTTAAG	-21	True	NA	-69	True	TATAAA	-5	NA	52439240	52488091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465930_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.13	chr4	+	5245	25	NNC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2278252353718	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-19	True	NA	21	True	ATTAAA	-21	NA	52439242	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439335_52440283_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.16	chr4	+	4961	23	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	98.757037619295	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-18	True	NA	18	True	ATTAAA	-18	NA	52439243	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440258_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.19	chr4	+	5231	24	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	96.9427753951951	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTGTAGTACTACAGT	-9	True	NA	19	True	ATTAAA	-19	NA	52439252	52488258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52484039_52484188_52486496
ES.23396.2	chr4	+	5503	26	NNC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	-318	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.727294876824	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGTACTACAGTTTT	NA	False	NA	22	True	ATTAAA	-22	NA	52438924	52488261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439013_52439156_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.20	chr4	+	2517	18	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	10	18442	1	11244	5prime_fragment	FALSE	canonical	3	347	junction_1	37.9264449284862	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAAGAAAAGTATGAAGC	-9	True	NA	NA	False	ATTAAA	-26	NA	52439252	52469818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771
ES.23396.23	chr4	+	3969	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	11	1348	2	-1348	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATAGTTGGTAAATTGT	-8	True	NA	NA	False	ATTAAA	-12	NA	52439253	52486912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.24	chr4	+	4047	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	11	1346	2	-1346	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTGGTAAATTGTGT	-8	True	NA	NA	False	ATTAAA	-14	NA	52439253	52486914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.26	chr4	+	2046	9	NIC	ENSMUSG00000028312.20	novel	1660	11	NA	NA	3	-1288	intron_retention	FALSE	canonical	3	387	junction_6	34.3017401162098	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGTTAAGAAGATA	-7	True	NA	NA	False	NA	NA	NA	52439254	52457286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261
ES.23396.27	chr4	+	5395	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	151.19769527197	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-4	True	NA	18	True	ATTAAA	-18	NA	52439257	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451055_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467787_52467915_52469765_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.28	chr4	+	5491	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	6	110	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	98.0471825194381	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTTTGTTTGTTT	-4	True	NA	NA	False	NA	NA	NA	52439257	52488370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460289_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.3	chr4	+	5582	26	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-241	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.2459349790941	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACAGTTTTTATTTCAA	NA	False	NA	30	True	ATTAAA	-30	NA	52439001	52488269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439085_52439156_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.30	chr4	+	5378	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	97.4897341461597	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-2	True	NA	18	True	ATTAAA	-18	NA	52439259	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458420_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.31	chr4	+	3937	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	17	1450	-6	-1450	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTAGTGTGATTATGGTC	-2	True	NA	NA	False	TTTAAA	-21	NA	52439259	52486810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.32	chr4	+	5459	26	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	122.561762389417	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-2	True	NA	18	True	ATTAAA	-18	NA	52439259	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52483698_52483774_52484039_52484188_52486496
ES.23396.34	chr4	+	4815	22	NIC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	95.3591135876256	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-2	True	NA	21	True	ATTAAA	-21	NA	52439259	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52439335_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.35	chr4	+	4682	19	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	111.080287391209	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-2	True	NA	18	True	ATTAAA	-18	NA	52439259	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52439411_52440200_52440424_52442252_52442403_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.37	chr4	+	2406	18	ISM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	17	18470	-6	11216	5prime_fragment	FALSE	canonical	3	100	junction_1	82.0190289339397	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCACAAAAGAAATCC	-2	True	NA	NA	False	NA	NA	NA	52439259	52469790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771
ES.23396.38	chr4	+	5365	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	98.2118953533068	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-2	True	NA	21	True	ATTAAA	-21	NA	52439259	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466047_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.39	chr4	+	7020	24	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-6	0	intron_retention	FALSE	canonical	3	347	junction_1	47.3125392524054	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-2	True	NA	21	True	ATTAAA	-21	NA	52439259	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.4	chr4	+	5613	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	-213	4	-213	-4	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTTGTAGTACTACA	NA	False	NA	17	True	ATTAAA	-17	NA	52439029	52488256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.41	chr4	+	5360	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	128.515536241948	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	11	True	NA	21	True	ATTAAA	-21	NA	52439272	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449647_52450819_52451049_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.42	chr4	+	5443	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	5	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	98.0012666443087	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTCATATATTCATAAG	12	True	NA	73	True	AATATA	-20	NA	52439273	52488312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460139_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.43	chr4	+	5403	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	34	-109	8	109	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTGTTTGTTTGTT	15	True	NA	NA	False	NA	NA	NA	52439276	52488369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.44	chr4	+	5261	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	8	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	98.2134862882328	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCTGTTTTGTTTT	15	True	NA	4	True	TATAAA	-13	NA	52439276	52488164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463002_52465939_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.45	chr4	+	5223	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	35	146	9	-146	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGACTATTTTGTGTG	16	True	NA	-46	True	TATAAA	-28	NA	52439277	52488114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.47	chr4	+	5213	24	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	96.501701797976	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTTGTAGTACTACA	20	True	NA	17	True	ATTAAA	-17	NA	52439281	52488256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52486496
ES.23396.49	chr4	+	5237	24	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	954	3	928	-3	3prime_fragment	FALSE	canonical	3	365	junction_10	44.4427373123097	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	86	False	NA	18	True	ATTAAA	-18	NA	52440196	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.5	chr4	+	5410	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	98.0471825194381	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-4	True	NA	21	True	ATTAAA	-21	NA	52439224	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460285_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.50	chr4	+	4769	22	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	6707	96	6681	-96	3prime_fragment	FALSE	canonical	3	365	junction_8	46.0841190839755	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCTGTTTTGTTTT	5839	False	NA	4	True	TATAAA	-13	NA	52445949	52488164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.51	chr4	+	168	1	Intergenic	novelGene_19208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAAAAGATTGGTA	8806	False	NA	NA	False	NA	NA	NA	52448916	52449084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_52448900_52449100
ES.23396.52	chr4	+	4306	17	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	11587	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.036999915289	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	NA	False	NA	18	True	ATTAAA	-18	NA	52450855	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52451055_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.53	chr4	+	4310	17	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	11983	3	11957	-3	3prime_fragment	FALSE	canonical	3	365	junction_3	46.8541620349783	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	364	False	NA	18	True	ATTAAA	-18	NA	52451225	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.54	chr4	+	4442	9	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	27154	0	27128	0	3prime_fragment	FALSE	canonical	3	378	junction_1	45.5549119195724	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	462	False	NA	21	True	ATTAAA	-21	NA	52466396	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.55	chr4	+	8202	1	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	40786	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTTTGTAGTACTACA	NA	False	NA	17	True	ATTAAA	-17	NA	52480054	52488256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52480100_52488300
ES.23396.56	chr4	+	2724	1	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	40868	-5400	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAAAAACCTTT	NA	False	NA	NA	False	ACTAAA	-13	NA	52480136	52482860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52480100_52482900
ES.23396.57	chr4	+	3591	3	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	40909	0	40883	0	3prime_fragment	FALSE	canonical	3	455	junction_2	40	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	NA	False	NA	21	True	ATTAAA	-21	NA	52480151	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_52481831_52484039_52484188_52486496
ES.23396.58	chr4	+	5280	2	NIC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	41400	-3	intron_retention	FALSE	canonical	3	455	junction_1	0	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	NA	False	NA	18	True	ATTAAA	-18	NA	52480668	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_52484188_52486496
ES.23396.6	chr4	+	4893	23	NNC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	117.53149744882	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-23	True	NA	21	True	ATTAAA	-21	NA	52439238	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439335_52440200_52440258_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.7	chr4	+	5378	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	128.327157589499	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-23	True	NA	21	True	ATTAAA	-21	NA	52439238	52488260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450830_52451054_52451227_52451378_52457261_52457496_52458414_52458556_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23396.8	chr4	+	5323	25	NNC	ENSMUSG00000028312.20	novel	5328	25	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	112.834433463371	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTGTAGTACTACAG	-21	True	NA	18	True	ATTAAA	-18	NA	52439240	52488257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481835_52484047_52484188_52486496
ES.23396.9	chr4	+	5372	25	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2278252353718	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAATTTTTGTAGTACTA	-21	True	NA	15	True	ATTAAA	-15	NA	52439240	52488254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_52439411_52440228_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ES.23397.1	chr4	-	178	1	Intergenic	novelGene_19205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	52433231	52433053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_52433100_52433200
ES.23398.1	chr4	-	3995	12	Intergenic	novelGene_19206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-29	NA	52462473	52440110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_52440422_52442250_52442401_52445949_52446073_52447710_52447750_52449318_52449431_52449609_52449654_52450817_52451052_52451225_52451373_52457254_52457494_52458412_52458573_52459018_52459139_52460157
ES.23398.2	chr4	-	4379	12	Intergenic	novelGene_19207	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52462467	52440796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_52442401_52445949_52446073_52447710_52447750_52449318_52449431_52449609_52449654_52450817_52451052_52451225_52451373_52457254_52457494_52458412_52458573_52459018_52459139_52460157_52460295_52461047
ES.23399.1	chr4	+	167	1	Intergenic	novelGene_19209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52517961	52518128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_52518000_52518100
ES.234.1	chr1	+	23578	101	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-337	124	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	45.393122827142	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATTTGTCTTTTTA	NA	False	NA	NA	False	TTTAAA	-18	NA	33946968	34346797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33947534_33948079_33948115_34007783_34007985_34045271_34045480_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206016_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.10	chr1	+	7102	33	NIC	ENSMUSG00000026131.21	novel	537	6	NA	NA	9	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.65469591910122	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAAACATTTGTGCC	187	False	NA	NA	False	AATAAA	-22	NA	34116316	34222975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34116454_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34220215
ES.234.100	chr1	+	4543	1	FSM	ENSMUSG00000026126.16	ENSMUST00000185610.2	1295	1	-13	-3235	-13	-2575	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCCAAAAAAAAAAAAAACCA	424	False	NA	NA	False	NA	NA	NA	34498829	34503372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34498800_34503400
ES.234.101	chr1	+	4407	2	FSM	ENSMUSG00000026126.16	ENSMUST00000186252.2	3495	2	-3522	2610	-13	-2610	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	424	False	NA	NA	False	NA	NA	NA	34498829	34503337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34502446_34502546
ES.234.102	chr1	+	4317	14	NIC	ENSMUSG00000026126.16	novel	1559	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	5.29709086174979	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTTTGTTCCAGTGA	467	False	NA	NA	False	AATAAA	-23	NA	34498872	34512865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34501892_34502187_34502265_34502349_34502446_34502546_34502586_34507373_34507443_34508920_34508984_34509280_34509424_34510573_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
ES.234.103	chr1	+	2614	7	NIC	ENSMUSG00000026126.16	novel	1559	15	NA	NA	-4427	0	intron_retention	FALSE	canonical	0	0	junction_1	5.3851648071345	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTTTGTTCCAGTGA	8968	False	NA	NA	False	AATAAA	-23	NA	34507373	34512865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34507443_34508920_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
ES.234.104	chr1	+	161	1	Antisense	novelGene_ENSMUSG00000100280.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34508518	34508679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_34508500_34508700
ES.234.105	chr1	+	1391	6	NIC	ENSMUSG00000026126.16	novel	1559	15	NA	NA	-1243	-7	intron_retention	FALSE	canonical	2	6	junction_1	4.09878030638384	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGGGGCTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	34510557	34512858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34510641_34510721_34510800_34510892_34510983_34511183_34512050_34512415_34512491_34512659
ES.234.11	chr1	+	17249	93	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	75	-31	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	45.6777981916494	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTCTGAAATAAAACACA	253	False	NA	NA	False	NA	NA	NA	34116382	34347454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34116454_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206022_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.12	chr1	+	180	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTAGATGGGGTCC	6700	False	NA	NA	False	NA	NA	NA	34131324	34131504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34131300_34131500
ES.234.13	chr1	+	194	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGATGCCAAAATTTGT	NA	False	NA	NA	False	NA	NA	NA	34135476	34135670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34135500_34135700
ES.234.14	chr1	+	966	3	NNC	ENSMUSG00000026131.21	novel	2728	18	NA	NA	-3776	5650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATAAGTGG	NA	False	NA	NA	False	NA	NA	NA	34156554	34181867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34156606_34174170_34174338_34181119
ES.234.15	chr1	+	156	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTAATAAATAAATCTT	4697	False	NA	NA	False	NA	NA	NA	34168346	34168502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34168300_34168500
ES.234.16	chr1	+	18659	70	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-5745	-663	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	25.7763961851547	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATCTGTCTCAGAGGC	5788	False	NA	NA	False	ATTAAA	-10	NA	34193665	34310710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435
ES.234.17	chr1	+	13715	65	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-6722	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	45.4758880780175	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTGGTTATTTGAAAT	NA	False	NA	22	True	AATAAA	-23	NA	34211264	34347740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.18	chr1	+	4171	2	ISM	ENSMUSG00000026131.21	ENSMUST00000183302.6	8788	24	18456	312	-120	-312	3prime_fragment	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGGAGGAGGGGTGTCA	2538	False	NA	NA	False	AATAAA	-19	NA	34217866	34222673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34219580_34220215
ES.234.19	chr1	+	15761	62	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	12379	0	intron_retention	FALSE	canonical	2	5	junction_2	45.8863791963784	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAATACTTGGTTAT	2447	False	NA	15	True	AATAAA	-16	NA	34230365	34347733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.2	chr1	+	1328	4	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-187	-117237	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTTCCTCAGTCTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	33947118	34040997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33947534_33948079_33948115_34007783_34007985_34040320
ES.234.20	chr1	+	12746	57	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	19638	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_52	44.3849945628806	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATACTTGGTTATTT	936	False	NA	17	True	AATAAA	-18	NA	34237624	34347735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338782_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.21	chr1	+	11945	55	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	21962	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	44.3522848505887	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	1848	False	NA	NA	False	NA	NA	NA	34239948	34347423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281865_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.22	chr1	+	4090	6	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	22275	21654	intron_retention	FALSE	canonical	3	21	junction_1	1.01980390271856	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCAATTTAATTTCCA	2161	False	NA	NA	False	ATTAAA	-16	NA	34240261	34253998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34240497_34241525_34241703_34247634_34250444_34251302_34251621_34251982_34252150_34253614
ES.234.23	chr1	+	11253	53	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-28045	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	44.042441875883	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTCTGAAATAAAACACA	9531	False	NA	NA	False	NA	NA	NA	34247631	34347454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314963_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.24	chr1	+	9844	45	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-18138	-29	combination_of_known_splicesites	FALSE	canonical	2	5	junction_41	39.0293119345274	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34257538	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.26	chr1	+	8967	42	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-8486	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	37.9618613206938	298	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34267190	34347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338791_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.27	chr1	+	7564	41	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-8370	108	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	37.8064065338138	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGATGGCCTTATTTG	NA	False	NA	NA	False	TTTAAA	-2	NA	34267306	34346781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.28	chr1	+	8594	42	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-8188	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	38.1441737266924	298	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTATGGAATACTTGG	NA	False	NA	11	True	AATAAA	-12	NA	34267488	34347729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292036_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.29	chr1	+	161	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34286063	34286224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34286100_34286200
ES.234.3	chr1	+	3227	5	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-170	-80015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.48746859276655	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAATTTCTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	33947135	34078219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_33947534_33948079_33948115_34007783_34007985_34045271_34045480_34075834
ES.234.30	chr1	+	7025	38	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-10056	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	36.2386578311405	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACGTATGGAATACTT	NA	False	NA	9	True	AATAAA	-10	NA	34286860	34347727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34286897_34288559_34288720_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.31	chr1	+	7333	39	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-8339	195381	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	36.4943076045378	601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAACTCTTAGGTATG	NA	False	NA	NA	False	NA	NA	NA	34288577	34543123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410_34347730_34543090
ES.234.32	chr1	+	7236	38	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-8034	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	39.6008204679966	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34288882	34347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328602_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.33	chr1	+	6526	36	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-7227	-62	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	32.0087488040379	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34289689	34347423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.34	chr1	+	6030	36	NNC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-6090	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	35.4585817596836	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATACTTGGTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	34290826	34347735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410_34346845_34347516
ES.234.35	chr1	+	13687	32	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-5025	4	intron_retention	FALSE	canonical	3	59	junction_1	28.940176553342	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATACTTGGTTATTTGA	NA	False	NA	19	True	AATAAA	-20	NA	34291891	34347737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.36	chr1	+	5630	35	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-5012	123	combination_of_known_junctions	FALSE	canonical	2	4	junction_30	36.2088449115267	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTATTTGTCTTTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	34291904	34346796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.37	chr1	+	5250	32	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-1606	125	combination_of_known_splicesites	FALSE	canonical	2	5	junction_28	32.9222904919796	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCTTTTTAT	NA	False	NA	NA	False	TTTAAA	-19	NA	34295310	34346798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.38	chr1	+	5241	32	NIC	ENSMUSG00000026131.21	novel	16340	84	NA	NA	-1296	118	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	29.2199666600238	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATTTGTGTATTTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	34295620	34346791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.39	chr1	+	7403	30	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-102	-62	intron_retention	FALSE	canonical	3	62	junction_1	27.7910925943225	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34296814	34347423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34297022_34299244_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.4	chr1	+	23607	98	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	60	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.6779332842107	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTATGGAATTAATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	33947365	34347487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_33947534_33948079_33948115_34007783_34007985_34045271_34045480_34125322_34125385_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.40	chr1	+	5613	29	NNC	ENSMUSG00000026131.21	novel	23279	98	NA	NA	4211	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	33.3321258284691	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34301127	34347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34301333_34302352_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.41	chr1	+	5143	28	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5426	-29	combination_of_known_junctions	FALSE	canonical	3	65	junction_3	26.9306379289325	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34302342	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.42	chr1	+	6436	27	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5446	2	intron_retention	FALSE	canonical	3	65	junction_2	26.8944903180457	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATACTTGGTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	34302362	34347735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.43	chr1	+	5120	29	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	5521	-29	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	36.6133095851155	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34302437	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.44	chr1	+	6029	27	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5541	-62	intron_retention	FALSE	canonical	3	65	junction_2	26.8944903180457	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34302457	34347423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.45	chr1	+	5159	28	NNC	ENSMUSG00000026131.21	novel	23279	98	NA	NA	5602	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	33.5907754010516	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34302518	34347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342530_34345608_34345733_34346410
ES.234.48	chr1	+	4861	27	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-5822	-33	combination_of_known_junctions	FALSE	canonical	2	4	junction_22	37.3555600924747	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCTCTGAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	34303828	34347452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.5	chr1	+	4194	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGTGAGTTGAAGGCCT	1588	False	NA	NA	False	NA	NA	NA	33977510	33981704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_33977500_33981700
ES.234.50	chr1	+	4035	25	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-3719	123	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	24.4784131089688	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTATTTGTCTTTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	34305931	34346796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.51	chr1	+	4979	25	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-3719	-2	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	24.4784131089688	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTGGTTATTTGAAAT	NA	False	NA	22	True	AATAAA	-23	NA	34305931	34347740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.52	chr1	+	3928	24	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-2343	121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	33.3365152860609	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTATTTGTCTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	34307307	34346794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332566_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.53	chr1	+	4300	22	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-1749	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	30.3398737061962	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	126	False	NA	NA	False	NA	NA	NA	34307901	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34339096_34342501_34342613_34345608_34345733_34346410
ES.234.54	chr1	+	4259	22	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	254	-31	combination_of_known_junctions	FALSE	canonical	3	93	junction_5	21.7757067829196	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTCTGAAATAAAACACA	1969	False	NA	NA	False	NA	NA	NA	34309904	34347454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.55	chr1	+	3572	18	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5101	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	37.2291138816817	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6816	False	NA	NA	False	NA	NA	NA	34314751	34347425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332563_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.56	chr1	+	9726	15	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5276	-1	intron_retention	FALSE	canonical	3	93	junction_1	20.9367365837064	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCGCTATGGAATTAATT	6991	False	NA	NA	False	AATAAA	-16	NA	34314926	34347484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34314961_34317100_34317221_34321503_34321674_34323339_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.57	chr1	+	3393	17	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	7447	-35	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	20.4048860570208	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCTCTGAAATAAAA	9162	False	NA	NA	False	NA	NA	NA	34317097	34347450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.58	chr1	+	3228	16	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	7447	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	47.7296087932381	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTGAAATAAAACACAT	9162	False	NA	NA	False	NA	NA	NA	34317097	34347455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332566_34333464_34333628_34334234_34334390_34334542_34334565_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.59	chr1	+	5987	14	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-9077	-29	intron_retention	FALSE	non_canonical	0	0	junction_2	40.0214439561013	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34323458	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34323500_34326267_34326463_34326967_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34345733_34346410
ES.234.6	chr1	+	23522	99	NNC	ENSMUSG00000026131.21	novel	4539	33	NA	NA	42	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	45.4099242951339	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTGAAATAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	34045004	34347456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34045090_34045271_34045480_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233750_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.60	chr1	+	5697	14	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-9022	-32	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	17.3611141354369	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCTCTGAAATAAAACAC	NA	False	NA	NA	False	NA	NA	NA	34323513	34347453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.61	chr1	+	3008	15	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-6249	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.1981587980421	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTGAAATAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	34326286	34347455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338791_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.62	chr1	+	6594	14	NNC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-5566	-30	intron_retention	FALSE	canonical	0	0	junction_8	57.2627082094385	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTGAAATAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	34326969	34347455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34338388_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.63	chr1	+	4982	12	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-5468	119	intron_retention	FALSE	canonical	3	119	junction_2	15.5744015445562	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATTTGTGTATTTGTCT	NA	False	NA	NA	False	TTTAAA	-13	NA	34327067	34346792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.64	chr1	+	2478	11	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	-3098	-31	combination_of_known_junctions	FALSE	canonical	3	119	junction_3	15.9862440867141	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTCTGAAATAAAACACA	NA	False	NA	NA	False	NA	NA	NA	34329437	34347454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.65	chr1	+	2202	11	NIC	ENSMUSG00000026131.21	novel	23201	103	NA	NA	-2934	-60	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	63.9503713828153	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34329601	34347425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334542_34334618_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.66	chr1	+	5475	5	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	411	-62	intron_retention	FALSE	canonical	3	126	junction_4	9.01387818865997	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34333937	34347423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34334390_34334542_34334618_34338801_34342613_34345608_34345733_34346410
ES.234.67	chr1	+	1775	7	NNC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	771	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.3421421920344	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCTCTGAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	34334297	34347452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34334390_34334542_34334618_34338791_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.68	chr1	+	1947	6	ISM	ENSMUSG00000026131.21	ENSMUST00000183034.5	23201	103	391495	-1055	5274	-3	3prime_fragment	FALSE	canonical	2	4	junction_1	71.6340701063398	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACGTATGGAATACTTG	NA	False	NA	10	True	AATAAA	-11	NA	34338800	34347728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ES.234.69	chr1	+	7560	2	NIC	ENSMUSG00000026131.21	novel	5729	32	NA	NA	5691	-30	intron_retention	FALSE	canonical	3	126	junction_1	0	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTGAAATAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	34339217	34347455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34345733_34346410
ES.234.7	chr1	+	5245	33	NIC	ENSMUSG00000026131.21	novel	4539	33	NA	NA	45	750	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	5.10275278036277	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGCTTAAGAAGTGTG	NA	False	NA	NA	False	ATTAAA	-34	NA	34045007	34214626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34045090_34045271_34045480_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777
ES.234.70	chr1	+	6310	1	NIC	ENSMUSG00000026131.21	novel	17212	93	NA	NA	7619	-30	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTCTGAAATAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	34341145	34347455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34341100_34347500
ES.234.71	chr1	+	4745	3	NIC	ENSMUSG00000026131.21	novel	23279	98	NA	NA	8394	0	intron_retention	FALSE	canonical	3	126	junction_2	24.5	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTATGGAATACTTGGTT	NA	False	NA	13	True	AATAAA	-14	NA	34341920	34347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34342114_34342501_34345733_34346410
ES.234.72	chr1	+	4454	9	NNC	ENSMUSG00000026127.14	novel	762	7	NA	NA	-364	-1129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	182.700403666768	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACACTCAAAAATGGA	5249	False	NA	NA	False	NA	NA	NA	34478567	34486890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34478810_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ES.234.73	chr1	+	6049	11	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	-340	1	intron_retention	FALSE	non_canonical	0	0	junction_9	215.228808480649	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGAGGTTGGGTTAAT	5273	False	NA	53	True	AATAAA	-16	NA	34478591	34488438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34486993_34487037_34487947_34488029
ES.234.74	chr1	+	1804	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	-332	4364	-332	478	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTTGTTTGTTTTGTG	5281	False	NA	48	True	NA	NA	NA	34478599	34484073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ES.234.75	chr1	+	5773	11	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	-65	1	intron_retention	TRUE	non_canonical	0	0	junction_9	215.228808480649	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGAGGTTGGGTTAAT	5548	False	NA	53	True	AATAAA	-16	NA	34478866	34488438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487005_34487050_34487947_34488029
ES.234.76	chr1	+	1413	9	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	6	441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	179.623042786832	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTAGCGTCTATTCCC	5619	False	NA	11	True	NA	NA	NA	34478937	34484036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482865_34483005_34483077_34483173_34483276_34483351_34483438
ES.234.77	chr1	+	1952	6	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	13	441	intron_retention	FALSE	canonical	0	0	junction_5	202.165674633455	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTAGCGTCTATTCCC	5626	False	NA	11	True	NA	NA	NA	34478944	34484036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34483005_34483077_34483173_34483276_34483349_34483438
ES.234.78	chr1	+	5778	10	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	16	3	intron_retention	TRUE	non_canonical	0	0	junction_9	172.795604653748	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGGTTGGGTTAATGT	5629	False	NA	55	True	AATAAA	-18	NA	34478947	34488440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487006_34487050
ES.234.79	chr1	+	1540	8	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	20	4364	20	478	intron_retention	FALSE	canonical	3	439	junction_1	60.4385334578083	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTTGTTTGTTTTGTG	5633	False	NA	48	True	NA	NA	NA	34478951	34484073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276
ES.234.8	chr1	+	7476	45	NIC	ENSMUSG00000026131.21	novel	17212	93	NA	NA	-232	21660	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	5.46036621240313	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTAATTTCCATTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	34050661	34254004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34050997_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614
ES.234.80	chr1	+	3449	20	Fusion	ENSMUSG00000026127.14_ENSMUSG00000026126.16	novel	5836	9	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_8	252.225649753057	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGCTTTGTTCCAGTGA	5643	False	NA	NA	False	AATAAA	-23	NA	34478961	34512865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34501782_34501892_34502187_34502446_34502546_34502586_34507373_34507443_34508920_34508984_34509280_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
ES.234.82	chr1	+	5576	10	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	-13	-181	intron_retention	FALSE	non_canonical	0	0	junction_9	172.795604653748	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTGGTGGTTCTTTTT	5647	False	NA	NA	False	NA	NA	NA	34478965	34488256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487006_34487050
ES.234.83	chr1	+	1597	8	FSM	ENSMUSG00000026127.14	ENSMUST00000149962.8	997	8	-18	-582	-11	455	multi-exon	FALSE	canonical	2	41	junction_3	172.422120840402	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCTGCCTAGCTCATTA	5649	False	NA	25	True	NA	NA	NA	34478967	34484050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34479009_34479121_34479231_34481990_34482186_34482458_34482569_34482643_34482777_34482849_34483173_34483276_34483351_34483438
ES.234.84	chr1	+	4269	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	36	1531	-11	-1113	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCCAGTCTCCTCTCT	5649	False	NA	NA	False	NA	NA	NA	34478967	34486906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ES.234.86	chr1	+	5654	11	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	1	-9	intron_retention	FALSE	non_canonical	0	0	junction_9	215.228808480649	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAAGTGTGCTGAGG	5661	False	NA	43	True	AATAAA	-6	NA	34478979	34488428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34486993_34487037_34487954_34488033
ES.234.88	chr1	+	1431	10	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	241.284064952495	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGCTGAGGTT	5663	False	NA	45	True	AATAAA	-8	NA	34478981	34488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479009_34479121_34479231_34481990_34482077_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34487706_34487947_34488028
ES.234.9	chr1	+	5610	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	498	False	NA	NA	False	NA	NA	NA	34100237	34105847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34100200_34105800
ES.234.90	chr1	+	5708	9	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	183.020106477403	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGCTGAGGTT	5802	False	NA	45	True	AATAAA	-8	NA	34479120	34488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487006_34487050
ES.234.91	chr1	+	5516	7	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	3335	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	192.667243367072	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGCTGAGGTT	9138	False	NA	45	True	AATAAA	-8	NA	34482456	34488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438_34487006_34487050
ES.234.92	chr1	+	4959	3	NNC	ENSMUSG00000026127.14	novel	365	2	NA	NA	-3984	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGCTGAGGTT	NA	False	NA	45	True	AATAAA	-8	NA	34483343	34488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34486993_34487037_34487947_34488029
ES.234.93	chr1	+	3479	3	NNC	ENSMUSG00000026127.14	novel	365	2	NA	NA	-2802	113	intron_retention	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCTTTGTAATTTAT	NA	False	NA	NA	False	NA	NA	NA	34484525	34488132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34486993_34487037_34487947_34488029
ES.234.95	chr1	+	2150	3	NNC	ENSMUSG00000026127.14	novel	365	2	NA	NA	-1175	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGCTGAGGTT	832	False	NA	45	True	AATAAA	-8	NA	34486152	34488430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34486988_34487032_34487947_34488029
ES.234.96	chr1	+	1884	2	NNC	ENSMUSG00000026127.14	novel	365	2	NA	NA	-1003	-184	intron_retention	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATGTCTGGTGGTTCTT	1004	False	NA	NA	False	NA	NA	NA	34486324	34488253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34486988_34487032
ES.234.97	chr1	+	6174	3	NNC	ENSMUSG00000026127.14	novel	365	2	NA	NA	-276	4954	intron_retention	FALSE	non_canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGCTTCTGTCATGGTG	1731	False	NA	NA	False	NA	NA	NA	34487051	34493391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34487947_34488029_34489543_34489625
ES.234.98	chr1	+	5620	13	NIC	ENSMUSG00000026126.16	novel	1559	15	NA	NA	-130	-7	intron_retention	FALSE	canonical	0	0	junction_5	5.46961302714065	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGGGGCTTTGTT	307	False	NA	NA	False	AATAAA	-16	NA	34498712	34512858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34501892_34502187_34502265_34502349_34502446_34502546_34502586_34507373_34507443_34508920_34508984_34509280_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
ES.234.99	chr1	+	1675	14	NIC	ENSMUSG00000026126.16	novel	1559	15	NA	NA	-35	-7	intron_retention	FALSE	canonical	0	0	junction_5	5.3659015466447	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGGGGCTTTGTT	402	False	NA	NA	False	AATAAA	-16	NA	34498807	34512858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34498998_34501782_34501892_34502187_34502446_34502546_34502586_34507373_34507443_34508920_34508984_34509280_34509424_34510573_34510641_34510721_34510800_34510892_34510983_34511183_34511273_34511843_34512050_34512415_34512491_34512659
ES.2340.1	chr10	-	3891	1	Genic_Genomic	ENSMUSG00000019820.12	novel	NA	NA	NA	NA	20243	3246	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCATACAGATGTCTT	NA	False	NA	NA	False	NA	NA	NA	12258576	12254685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_12254700_12258600
ES.2340.10	chr10	-	4920	25	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	28503	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	26.7285414969758	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12462072	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12461970
ES.2340.11	chr10	-	12844	75	FSM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	147	-1190	147	0	multi-exon	FALSE	canonical	2	9	junction_73	46.2904729827861	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12744962	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
ES.2340.12	chr10	-	4929	24	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	222	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1167950925549	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12490353	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259949_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12490234
ES.2340.13	chr10	-	5042	25	FSM	ENSMUSG00000019820.12	ENSMUST00000217994.2	3161	25	117	-1998	117	0	multi-exon	FALSE	canonical	3	18	junction_24	24.236536927173	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12490458	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12490234
ES.2340.14	chr10	-	5527	25	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	26.3902009907718	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424638	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423929
ES.2340.15	chr10	-	4971	24	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3290232893361	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424372	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259956_12277050_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12424215
ES.2340.16	chr10	-	3148	11	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-36664	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.5670933898575	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12315483	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259949_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291203_12291234_12297340_12297478_12312024_12312137_12315370
ES.2340.18	chr10	-	12799	74	NNC	ENSMUSG00000019820.12	novel	11801	75	NA	NA	153	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.1056265393324	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12744956	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259948_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737450_12744498
ES.2340.19	chr10	-	5773	24	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.0531746375803	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424649	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259956_12277050_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.2	chr10	-	6159	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-10	-398	-10	396	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTATGTATATATA	NA	False	NA	NA	False	NA	NA	NA	12424633	12257535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.21	chr10	-	13196	75	NNC	ENSMUSG00000019820.12	novel	11801	75	NA	NA	-211	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.2399496512979	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12745320	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312131_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
ES.2340.22	chr10	-	5996	31	NNC	ENSMUSG00000019820.12	novel	12382	74	NA	NA	34081	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.5011827806562	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12530525	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259956_12277050_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524958_12528454_12528605_12530442
ES.2340.23	chr10	-	4936	25	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_24	26.7285414969758	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTTTGATGTTTGGCT	NA	False	NA	-5	True	AATAAA	-17	NA	12424583	12257935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12424463
ES.2340.28	chr10	-	6107	24	NIC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	61	junction_23	18.32277292228	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTTTGATGTTTGG	NA	False	NA	-7	True	AATAAA	-15	NA	12424642	12257937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.3	chr10	-	5992	28	NNC	ENSMUSG00000019820.12	novel	12382	74	NA	NA	-28687	395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.0660203559489	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTGTATGTATATAT	NA	False	NA	NA	False	NA	NA	NA	12519262	12257536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259949_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146
ES.2340.31	chr10	-	4787	25	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	28520	-116	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	26.7285414969758	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGATGAGAAATAAGTGT	NA	False	NA	-119	True	AATAAA	-24	NA	12462055	12258049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12461970
ES.2340.32	chr10	-	5654	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-22	119	-22	-119	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCATGATGAGAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	12424645	12258052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.33	chr10	-	4577	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-24	1198	-24	-8	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGTCTCAAAAAATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	12424647	12259131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.34	chr10	-	4275	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-17	1493	-17	-303	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTCTATGTATTTGTTT	NA	False	NA	NA	False	TATAAA	-22	NA	12424640	12259426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.35	chr10	-	4041	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-19	1729	-19	269	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTCACTGATTTGTA	NA	False	NA	NA	False	AATGAA	-26	NA	12424642	12259662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.36	chr10	-	2070	1	NIC	ENSMUSG00000019820.12	novel	12382	74	NA	NA	16548	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTTGTCACCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	12262271	12260201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_12260200_12262300
ES.2340.37	chr10	-	3723	12	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-4	-45071	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.7747775778383	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCTATGGTCCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	12424627	12321880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12424215
ES.2340.38	chr10	-	3037	12	ISM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	141	65013	141	-46137	5prime_fragment	FALSE	canonical	3	61	junction_11	19.0874455732661	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	12424482	12322946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.39	chr10	-	2252	11	ISM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-15	73224	-15	-54348	5prime_fragment	FALSE	canonical	3	61	junction_10	19.9789889634085	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTCTGCGTCGATATGT	NA	False	NA	NA	False	NA	NA	NA	12424638	12331157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.4	chr10	-	6781	34	ISM	ENSMUSG00000019820.12	ENSMUST00000076817.5	12382	74	200805	-393	27932	393	3prime_fragment	FALSE	canonical	3	20	junction_25	44.0184659472887	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTGTGTATGTATAT	NA	False	NA	NA	False	NA	NA	NA	12536674	12257538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522
ES.2340.40	chr10	-	4249	23	NNC	ENSMUSG00000019820.12	novel	12382	74	NA	NA	9527	-84740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	34.1830572792821	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTTGTAATCAGGAGT	NA	False	NA	NA	False	AATAAA	-13	NA	12555079	12361549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12555019
ES.2340.41	chr10	-	137	1	Intergenic	novelGene_1776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAACAAAA	9079	False	NA	NA	False	NA	NA	NA	12374787	12374650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12374600_12374800
ES.2340.42	chr10	-	2830	4	NNC	ENSMUSG00000019820.12	novel	12382	74	NA	NA	-4	-114693	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.2400547137693	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGACACATACCTAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	12424627	12391502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12393066_12401081_12401239_12413784_12413958_12423690
ES.2340.43	chr10	-	147	1	Intergenic	novelGene_1777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAATAAATAAAAATT	8006	False	NA	NA	False	NA	NA	NA	12437277	12437130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12437100_12437300
ES.2340.44	chr10	-	7427	1	NIC	ENSMUSG00000019820.12	novel	3161	25	NA	NA	266	59284	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACAATGAGCTACATT	NA	False	NA	NA	False	NA	NA	NA	12490309	12482882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_12482900_12490300
ES.2340.45	chr10	-	6137	40	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	210	281653	210	1390	5prime_fragment	FALSE	canonical	2	9	junction_38	4.13623999090084	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGACATTGAATTATCA	NA	False	NA	NA	False	AATAAA	-14	NA	12744899	12540776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
ES.2340.46	chr10	-	4714	27	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	173	306850	173	-23807	5prime_fragment	FALSE	canonical	2	9	junction_25	3.6802688350479	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTGGTCAAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	12744936	12565973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
ES.2340.47	chr10	-	177	1	Intergenic	novelGene_1784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCACGTCAAG	NA	False	NA	NA	False	NA	NA	NA	12673855	12673678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12673700_12673900
ES.2340.5	chr10	-	5996	24	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	141	392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.0531746375803	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTGTATGTATA	NA	False	NA	NA	False	NA	NA	NA	12424482	12257539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259949_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.7	chr10	-	5845	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	-91	-3	-91	1	multi-exon	FALSE	canonical	3	61	junction_24	17.9698339045066	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTTGGCTGTGTT	NA	False	NA	0	True	AATAAA	-22	NA	12424714	12257930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.2340.8	chr10	-	4936	24	NNC	ENSMUSG00000019820.12	novel	3161	25	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1167950925549	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATGTTTGGCTGTGT	NA	False	NA	-1	True	AATAAA	-21	NA	12490354	12257931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259956_12277050_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12490234
ES.2340.9	chr10	-	5830	24	NNC	ENSMUSG00000019820.12	novel	5751	25	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.0531746375803	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424710	12257933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_12259949_12277047_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ES.23400.1	chr4	+	166	1	Intergenic	novelGene_19210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGTCGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	52586510	52586676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_52586500_52586700
ES.23401.1	chr4	-	177	1	Intergenic	novelGene_19211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	52757250	52757073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_52757100_52757200
ES.23402.1	chr4	+	1538	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	20	-6	20	6	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGAGTCTTCTATAT	-1	True	NA	16	True	AATAAA	-27	NA	53011899	53022066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.10	chr4	+	2170	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	49	-667	-21	667	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATTATGTTTTTCTTG	-19	True	NA	NA	False	ATTAAA	-31	NA	53011928	53022727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.11	chr4	+	2064	7	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-20	-9	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	267.705061588308	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGATTTTTTATCAA	-18	True	NA	1	True	AATAAA	-12	NA	53011929	53022051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114_53018686_53020181_53020332_53021110_53021198_53021283
ES.23402.12	chr4	+	3227	4	NNC	ENSMUSG00000015247.11	novel	848	5	NA	NA	-20	-652	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	267.58716129308	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	-18	True	NA	NA	False	NA	NA	NA	53011929	53020853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114
ES.23402.13	chr4	+	4517	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-18	-9	intron_retention	FALSE	canonical	1	1	junction_1	271.177137679414	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGATTTTTTATCAA	-16	True	NA	1	True	AATAAA	-12	NA	53011931	53022051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53013676_53013729_53015014_53015226_53017048_53020332_53021110_53021198_53021283
ES.23402.14	chr4	+	5050	3	NIC	ENSMUSG00000015247.11	novel	848	5	NA	NA	-17	9	intron_retention	FALSE	canonical	3	5	junction_1	293.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTCTTCTATATTTA	-15	True	NA	19	True	AATAAA	-30	NA	53011932	53022069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53012048_53017048_53021198_53021283
ES.23402.15	chr4	+	1588	7	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	268.656327344476	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTATCAAGTGAGT	-15	True	NA	7	True	AATAAA	-18	NA	53011932	53022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018593_53018686_53020181_53020332_53021110_53021198_53021283
ES.23402.16	chr4	+	4471	5	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	528	junction_2	29.9040131086114	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	-14	True	NA	9	True	AATAAA	-20	NA	53011933	53022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53012048_53015014_53015226_53017048_53020332_53021110_53021198_53021283
ES.23402.17	chr4	+	994	5	FSM	ENSMUSG00000015247.11	ENSMUST00000107665.4	848	5	0	-146	0	146	multi-exon	FALSE	canonical	3	19	junction_3	242.862615484557	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGTTCATTTTTCCT	2	True	NA	15	True	AATAAA	-17	NA	53011949	53021722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53021110_53021198_53021283
ES.23402.18	chr4	+	2309	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1	junction_1	264.927612754881	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTATCAAGTGAGT	3	True	NA	7	True	AATAAA	-18	NA	53011950	53022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53013676_53013729_53015014_53015226_53017048_53017208_53020181_53021198_53021283
ES.23402.19	chr4	+	5992	5	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	1	146	intron_retention	FALSE	canonical	1	1	junction_1	284.716525688271	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGTTCATTTTTCCT	3	True	NA	15	True	AATAAA	-17	NA	53011950	53021722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53013676_53013729_53015014_53020332_53021110_53021198_53021283
ES.23402.2	chr4	+	2157	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	24	653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	230.894434753201	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATGTTTTTTTAAACA	3	True	NA	NA	False	ATTAAA	-17	NA	53011903	53022713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017072_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.20	chr4	+	7108	4	NNC	ENSMUSG00000015247.11	novel	848	5	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_1	274.23145131237	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	3	True	NA	9	True	AATAAA	-20	NA	53011950	53022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53013676_53013729_53015014_53021198_53021283
ES.23402.21	chr4	+	3210	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	2	147	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	229.364862173786	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGTTCATTTTTCCTG	4	True	NA	16	True	AATAAA	-18	NA	53011951	53021723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114_53020332_53021110_53021198_53021283
ES.23402.22	chr4	+	1409	6	NNC	ENSMUSG00000015247.11	novel	444	2	NA	NA	422	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	210.438589617019	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	424	False	NA	9	True	AATAAA	-20	NA	53012371	53022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012398_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.23	chr4	+	3574	3	ISM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	5595	147	-3501	-147	3prime_fragment	FALSE	canonical	3	567	junction_1	12.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACGGTCTTAGTGTGTT	5527	False	NA	NA	False	AATATA	-19	NA	53017474	53021913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_53020332_53021110_53021198_53021283
ES.23402.24	chr4	+	3629	1	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-2544	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	6484	False	NA	10	True	AATAAA	-21	NA	53018431	53022060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53018400_53022100
ES.23402.25	chr4	+	1456	1	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-517	-146	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGTCTTAGTGTGTTT	8511	False	NA	NA	False	AATATA	-20	NA	53020458	53021914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53020500_53021900
ES.23402.3	chr4	+	2180	3	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	25	-1	intron_retention	FALSE	canonical	3	5	junction_1	261	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	4	True	NA	9	True	AATAAA	-20	NA	53011904	53022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53012048_53017048_53017208_53020181
ES.23402.4	chr4	+	1215	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	25	312	25	172	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTATTTTTTACCAGT	4	True	NA	41	True	AATAAA	-43	NA	53011904	53021748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.5	chr4	+	1309	5	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	25	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	242.299788485256	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATTTTTTATCAAGT	4	True	NA	3	True	AATAAA	-14	NA	53011904	53022053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53012048_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.6	chr4	+	1386	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	218.783363170055	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTATCAAGTGAGT	9	False	NA	7	True	AATAAA	-18	NA	53011909	53022057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015147_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23402.7	chr4	+	3566	6	NNC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-26	-9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	229.364862173786	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGATTTTTTATCAA	-24	True	NA	1	True	AATAAA	-12	NA	53011923	53022051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53012048_53015014_53015226_53017048_53017208_53018114_53020332_53021110_53021198_53021283
ES.23402.8	chr4	+	9271	3	NIC	ENSMUSG00000015247.11	novel	1552	6	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	567	junction_1	12.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCAAGTGAGTCT	-24	True	NA	9	True	AATAAA	-20	NA	53011923	53022059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53020332_53021110_53021198_53021283
ES.23402.9	chr4	+	1361	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	45	146	-25	-146	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGTCTTAGTGTGTTT	-23	True	NA	NA	False	AATATA	-20	NA	53011924	53021914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ES.23403.1	chr4	+	6057	1	Antisense	novelGene_ENSMUSG00000015243.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2198	False	NA	NA	False	NA	NA	NA	53131024	53137081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_53131000_53137100
ES.23404.1	chr4	-	10155	50	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-362	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_49	9.74446521103457	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTGTGCATCCGTA	NA	False	NA	3	True	AATAAA	-30	NA	53160257	53030780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53160150
ES.23404.10	chr4	-	7386	34	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-38674	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	10.8593140465255	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGGTCTACACAAAGT	NA	False	NA	-15	True	AATAAA	-12	NA	53079600	53030798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53052026_53052077_53059224_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570
ES.23404.12	chr4	-	6585	28	NIC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-34258	-95	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	10.687993083789	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTGTGAATAACTTTA	NA	False	NA	-98	True	ATTAAA	-22	NA	53075184	53030881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130
ES.23404.13	chr4	-	5337	17	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-18215	-119	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	10.9936060962725	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAACTGAAA	6649	False	NA	NA	False	NA	NA	NA	53059141	53030905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53058929
ES.23404.14	chr4	-	10258	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	-115	119	-115	-119	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAACTGAAA	NA	False	NA	NA	False	NA	NA	NA	53160010	53030905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23404.15	chr4	-	5226	16	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-18179	-119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	11.6531350097541	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAACTGAAA	6685	False	NA	NA	False	NA	NA	NA	53059105	53030905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53058929
ES.23404.16	chr4	-	7701	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	3	2558	3	2143	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCACATGTGACTAAATC	0	True	NA	NA	False	ATTAAA	-19	NA	53159892	53033344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23404.17	chr4	-	5102	2	Intergenic	novelGene_19212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4734	False	NA	NA	False	NA	NA	NA	53155158	53150019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53152986_53153022
ES.23404.3	chr4	-	10251	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	1	10	1	-10	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGTCTACACAAAGTTC	-2	True	NA	-13	True	AATAAA	-14	NA	53159894	53030796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23404.5	chr4	-	5433	17	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-18203	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	10.9936060962725	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	6661	False	NA	-14	True	AATAAA	-13	NA	53059129	53030797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53058929
ES.23404.7	chr4	-	10241	50	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	-59	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	9.59891185003313	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	NA	False	NA	-14	True	AATAAA	-13	NA	53159954	53030797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049065_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23404.8	chr4	-	10254	50	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	10.031063788703	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	0	True	NA	-14	True	AATAAA	-13	NA	53159892	53030797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072791_53072871_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23404.9	chr4	-	10393	51	NNC	ENSMUSG00000015243.5	novel	10262	50	NA	NA	4	-11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	10.1816305177511	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGTCTACACAAAGTT	1	True	NA	-14	True	AATAAA	-13	NA	53159891	53030797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53075948_53076095_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ES.23405.1	chr4	+	1810	1	Intergenic	novelGene_19213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTAAGGGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	53239693	53241503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53239700_53241500
ES.23406.1	chr4	+	1009	3	Intergenic	novelGene_19214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACCTGCAATACTGGT	NA	False	NA	NA	False	TATAAA	-12	NA	53327714	53335224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53327808_53327906_53328475_53334876
ES.23407.1	chr4	-	2617	3	NNC	ENSMUSG00000086712.3	novel	2033	2	NA	NA	-57243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGATCGTGTACTTCAT	NA	False	NA	NA	False	ACTAAA	-17	NA	53327475	53261355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_53263235_53318650_53319316_53327402
ES.23407.2	chr4	-	903	3	Antisense	novelGene_ENSMUSG00000083735.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTTTGGGTAATTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	53327971	53307552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_53307653_53318650_53319316_53327833
ES.23407.3	chr4	-	382	4	Antisense	novelGene_ENSMUSG00000083735.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTAAGTGGTTTGGGT	25	False	NA	NA	False	AATAAA	-14	NA	53339805	53307559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_53307653_53319146_53319316_53338040_53338124_53339768
ES.23407.4	chr4	-	5516	1	Antisense	novelGene_ENSMUSG00000083735.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTAAGTGGTTTGG	NA	False	NA	NA	False	AATAAA	-45	NA	53313077	53307561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_53307600_53313100
ES.23407.5	chr4	-	2732	1	Intergenic	novelGene_19215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	8577	False	NA	NA	False	NA	NA	NA	53331253	53328521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53328500_53331300
ES.23408.1	chr4	+	3764	3	Intergenic	novelGene_19216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	26.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	401	False	NA	NA	False	NA	NA	NA	53340523	53346232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53340569_53340696_53340778_53342594
ES.23408.2	chr4	+	547	5	Intergenic	novelGene_19217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	22.9496732002876	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTGACTGGGACAGAC	413	False	NA	-1	True	AATAAA	-11	NA	53340535	53356048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53340569_53340696_53340778_53342594_53342685_53347408_53347605_53355901
ES.23408.3	chr4	+	3772	2	Intergenic	novelGene_19218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	0	True	NA	NA	False	NA	NA	NA	53341419	53346248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53341538_53342594
ES.23408.4	chr4	+	959	5	Intergenic	novelGene_19220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	6.83282518435822	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTTCCTGTCACTCGT	2	True	NA	NA	False	AATGAA	-11	NA	53341421	53356282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53341538_53342594_53342685_53351225_53351348_53352816_53353067_53355901
ES.23408.5	chr4	+	667	5	Intergenic	novelGene_19219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.79422863405995	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGACAGACTGAGCTAT	2	True	NA	7	True	AATAAA	-19	NA	53341421	53356056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53341538_53342594_53342685_53351225_53351348_53352882_53353067_53355901
ES.23408.6	chr4	+	278	2	Intergenic	novelGene_19221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAGAGTAAAAGCTAGAA	3	True	NA	3	True	NA	NA	NA	53341422	53342757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53341538_53342594
ES.23408.7	chr4	+	4885	2	Intergenic	novelGene_19222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACACTTTGAAAATGTTTA	17	False	NA	NA	False	NA	NA	NA	53341436	53347378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53341538_53342594
ES.23408.8	chr4	+	3738	2	Intergenic	novelGene_19224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGGACAGACTGAGCT	8062	False	NA	5	True	AATAAA	-17	NA	53349481	53356054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53353067_53355901
ES.23408.9	chr4	+	6448	1	Intergenic	novelGene_19225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGACAGACTGAGCTAT	8189	False	NA	7	True	AATAAA	-19	NA	53349608	53356056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53349600_53356100
ES.23409.1	chr4	-	1585	2	Intergenic	novelGene_19223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAGAACAAGTTTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	53353827	53347379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53348545_53353407
ES.2341.1	chr10	+	146	1	Intergenic	novelGene_1788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	12797641	12797787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12797600_12797800
ES.23410.1	chr4	-	165	1	Intergenic	novelGene_19226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	TATAAA	-15	NA	53437561	53437396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53437400_53437600
ES.23411.1	chr4	+	4831	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-448	-1	-190	1	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTATGTGTGTAACCATG	NA	False	NA	34	True	AATAAA	-34	NA	53440222	53567819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.10	chr4	+	4507	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.1917991422461	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	-31	True	NA	12	True	AATAAA	-12	NA	53440414	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491518_53517641_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.11	chr4	+	4532	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	3	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTGTTTAGAAATTAT	-30	True	NA	14	True	AATAAA	-14	NA	53440415	53567799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53565469_53565554
ES.23411.12	chr4	+	5538	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-253	-903	5	903	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGAGTCTTTTTTAAA	-28	True	NA	NA	False	NA	NA	NA	53440417	53568721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.13	chr4	+	4473	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	6	-18	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	99.2818344565672	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	-27	True	NA	15	True	AATAAA	-15	NA	53440418	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53481463_53481554_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.14	chr4	+	6792	15	FSM	ENSMUSG00000028412.18	ENSMUST00000107647.8	2176	15	-265	-4351	6	-17	multi-exon	FALSE	canonical	3	334	junction_12	24.6705848147554	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTTTAGAAATTATGC	-27	True	NA	16	True	AATAAA	-16	NA	53440418	53567801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140
ES.23411.15	chr4	+	4341	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	8	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	-25	True	NA	13	True	AATAAA	-13	NA	53440420	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53566687_53566957
ES.23411.16	chr4	+	3629	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-249	1002	9	-1002	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAATAATAATAAT	-24	True	NA	NA	False	AATACA	-9	NA	53440421	53566816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.17	chr4	+	4438	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	10	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	-23	True	NA	15	True	AATAAA	-15	NA	53440422	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53567075_53567248
ES.23411.18	chr4	+	4467	16	NNC	ENSMUSG00000028412.18	novel	3102	16	NA	NA	11	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3047016274676	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	-22	True	NA	13	True	AATAAA	-13	NA	53440423	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440575_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.19	chr4	+	4665	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	11	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.348498569987	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	-22	True	NA	15	True	AATAAA	-15	NA	53440423	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53442335_53442390_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.2	chr4	+	4913	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-189	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	124.7015029731	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	NA	False	NA	12	True	AATAAA	-12	NA	53440223	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53463283_53463389_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.20	chr4	+	4305	14	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	19	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	130.202118707709	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCTCTATGTGTGTAAC	-14	True	NA	30	True	AATAAA	-30	NA	53440431	53567815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53481463_53481554_53517544_53517682_53528654_53528749_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.21	chr4	+	3076	16	FSM	ENSMUSG00000028412.18	ENSMUST00000102911.10	3102	16	20	6	20	-6	multi-exon	FALSE	canonical	3	11	junction_15	93.8563914830643	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATTATGCGTTGTCCGT	-13	True	NA	NA	False	NA	NA	NA	53440432	53622472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53621594
ES.23411.23	chr4	+	3791	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	24	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	-9	True	NA	12	True	AATAAA	-12	NA	53440436	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53566427_53567230
ES.23411.24	chr4	+	4169	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	26	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	-7	True	NA	12	True	AATAAA	-12	NA	53440438	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53567355_53567778
ES.23411.25	chr4	+	9833	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-232	-5219	26	5219	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTTGTCTACTGT	-7	True	NA	NA	False	AATAAA	-18	NA	53440438	53573037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.27	chr4	+	2274	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-229	2337	29	2031	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTGTGTGTGGGTGTG	-4	True	NA	NA	False	AATATA	-15	NA	53440441	53565481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.28	chr4	+	4503	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	33	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	0	True	NA	13	True	AATAAA	-13	NA	53440445	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53565702_53565785
ES.23411.3	chr4	+	2069	13	FSM	ENSMUSG00000028412.18	ENSMUST00000107646.9	1974	13	-131	36	-131	-36	multi-exon	FALSE	canonical	3	6	junction_12	105.39143308005	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	53440281	53550164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53549988
ES.23411.30	chr4	+	4533	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	39	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.5277156448825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	6	True	NA	15	True	AATAAA	-15	NA	53440451	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396_53565977_53566026
ES.23411.31	chr4	+	5271	1	NIC	ENSMUSG00000028412.18	novel	1974	13	NA	NA	40	-82986	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTCTTGGTCATGA	7	True	NA	NA	False	NA	NA	NA	53440452	53445723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440500_53445700
ES.23411.32	chr4	+	4683	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	40	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	123.443923883478	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	7	True	NA	12	True	AATAAA	-12	NA	53440452	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53510101_53510206_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.33	chr4	+	4299	14	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	41	-20	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	101.326702264092	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	8	True	NA	13	True	AATAAA	-13	NA	53440453	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53481463_53481554_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.35	chr4	+	4580	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	46	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.3047016274676	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	13	True	NA	13	True	AATAAA	-13	NA	53440458	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481457_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.36	chr4	+	3486	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	-210	1106	48	-1106	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTTGTTACAATTTT	15	True	NA	NA	False	AAAAAG	-43	NA	53440460	53566712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.37	chr4	+	4518	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	53	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.5128431292379	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	20	True	NA	15	True	AATAAA	-15	NA	53440465	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545747_53553514_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.39	chr4	+	4497	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	54	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	95.8446428109342	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	21	True	NA	12	True	AATAAA	-12	NA	53440466	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553614_53560972_53561152_53563140_53563222_53565396
ES.23411.4	chr4	+	4511	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-25	-17	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	96.5243968314409	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTTTAGAAATTATGC	NA	False	NA	16	True	AATAAA	-16	NA	53440387	53567801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53481463_53481554_53491387_53491531_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.40	chr4	+	4552	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	63	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	95.9723571312768	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	30	True	NA	15	True	AATAAA	-15	NA	53440475	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541307_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.42	chr4	+	4432	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	86	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.6680371562693	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	53	True	NA	12	True	AATAAA	-12	NA	53440498	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517632_53528705_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.44	chr4	+	4388	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-59	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	147.839492543622	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	79	False	NA	12	True	AATAAA	-12	NA	53440611	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53463283_53463389_53481463_53481554_53491387_53491531_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.45	chr4	+	4579	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-11	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3047016274676	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	127	False	NA	15	True	AATAAA	-15	NA	53440659	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440921_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.46	chr4	+	4423	16	NNC	ENSMUSG00000028412.18	novel	2365	11	NA	NA	13022	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3047016274676	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	NA	False	NA	12	True	AATAAA	-12	NA	53453705	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53453814_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.47	chr4	+	4343	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	40811	-13	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_2	128.078031770566	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGAAATTATGCTCTA	NA	False	NA	20	True	AATAAA	-20	NA	53481494	53567805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53481554_53491387_53491531_53498597_53498649_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.48	chr4	+	2424	1	Intergenic	novelGene_19228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCAACAAATCGCAGACT	NA	False	NA	NA	False	NA	NA	NA	53518573	53520997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53518600_53521000
ES.23411.5	chr4	+	4533	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-3	-20	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	98.6621994070512	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	-36	True	NA	13	True	AATAAA	-13	NA	53440409	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.51	chr4	+	2354	6	NNC	ENSMUSG00000028412.18	novel	2365	11	NA	NA	9047	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	177.898397969178	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	NA	False	NA	12	True	AATAAA	-12	NA	53544658	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53544698_53545684_53545769_53553485_53553624_53560914_53561156_53565777_53566134_53566301
ES.23411.52	chr4	+	3550	1	Intergenic	novelGene_19229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAACT	9112	False	NA	NA	False	NA	NA	NA	53575701	53579251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_53575700_53579300
ES.23411.6	chr4	+	4510	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-3	-21	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	95.1229847209507	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTGTTTAGAAATT	-36	True	NA	12	True	AATAAA	-12	NA	53440409	53567797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53561026_53561152_53563140_53563222_53565396
ES.23411.7	chr4	+	4600	16	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-2	-20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	95.4029116723151	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	-35	True	NA	13	True	AATAAA	-13	NA	53440410	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53481463_53481554_53491409_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.8	chr4	+	4680	17	NNC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.510395485792	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTGTTTAGAAATTA	-34	True	NA	13	True	AATAAA	-13	NA	53440411	53567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53440717_53456407_53456467_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23411.9	chr4	+	4453	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	-1	-18	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	92.0617860405695	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTAGAAATTATG	-34	True	NA	15	True	AATAAA	-15	NA	53440411	53567800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ES.23412.1	chr4	-	10276	2	Antisense	novelGene_ENSMUSG00000028412.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAAAAAGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	53480101	53469755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_53476471_53476540
ES.23413.1	chr4	-	6193	1	Intergenic	novelGene_19227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	53490554	53484361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53484400_53490600
ES.23414.1	chr4	-	4568	1	Antisense	novelGene_ENSMUSG00000028412.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	53542595	53538027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_53538000_53542600
ES.23415.1	chr4	+	7515	12	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.98655895658087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	-8	True	NA	8	True	ATTAAA	-17	NA	53631418	53707009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791_53649910_53659509_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.10	chr4	+	6921	9	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25598	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	8.42522254898943	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGTCCATTTTTTA	NA	False	NA	6	True	ATTAAA	-15	NA	53668877	53707007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53669098_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040_53702195_53702341
ES.23415.11	chr4	+	7100	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25780	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	5.67845911838623	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	False	NA	8	True	ATTAAA	-17	NA	53669059	53707009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53669310_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.12	chr4	+	6849	7	ISM	ENSMUSG00000054752.17	ENSMUST00000180164.2	7340	13	36513	2	36513	-2	3prime_fragment	FALSE	canonical	3	17	junction_6	5.14511634681104	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGTCCATTTTTTA	NA	False	NA	6	True	ATTAAA	-15	NA	53679792	53707007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.13	chr4	+	4656	6	ISM	ENSMUSG00000054752.17	ENSMUST00000180164.2	7340	13	38879	1925	38879	-1925	3prime_fragment	FALSE	canonical	3	17	junction_5	1.35646599662505	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTCTTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	53682158	53705084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.2	chr4	+	671	4	FSM	ENSMUSG00000054752.17	ENSMUST00000107643.8	2350	4	-51	1730	-32	-1730	multi-exon	FALSE	canonical	3	14	junction_1	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGCATCTACTTGTG	12	True	NA	NA	False	AATAAA	-18	NA	53631438	53650060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791
ES.23415.3	chr4	+	3056	12	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	-26	1423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.98655895658087	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTCTTTTATTACAAAG	18	True	NA	NA	False	NA	NA	NA	53631444	53702576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791_53649910_53659509_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.4	chr4	+	7418	12	NIC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	7.61577310586391	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTCCATTTTTTAT	13	True	NA	7	True	ATTAAA	-16	NA	53631495	53707008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791_53649894_53659512_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.5	chr4	+	2804	12	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	669	969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.04625396193373	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTTCTGGAATAATTT	NA	False	NA	NA	False	TATAAA	-17	NA	53643948	53702122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53644338_53646986_53647083_53647669_53647802_53649791_53649894_53659512_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.6	chr4	+	6929	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.0034007180507	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	False	NA	8	True	ATTAAA	-17	NA	53668382	53707009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53668462_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.7	chr4	+	7108	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25136	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	False	NA	8	True	ATTAAA	-17	NA	53668415	53707009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53668674_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.8	chr4	+	7102	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25566	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	False	NA	8	True	ATTAAA	-17	NA	53668845	53707009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53669098_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23415.9	chr4	+	2100	8	NNC	ENSMUSG00000054752.17	novel	7467	13	NA	NA	25597	885	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	4.94871659305393	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTGCTGGGTTTTGTTG	NA	False	NA	NA	False	TATAAA	-14	NA	53668876	53702038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53669098_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ES.23416.1	chr4	+	5988	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	151	-59	-14	59	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAATAGTAATTGTGCC	-22	True	NA	64	True	AATAAA	-21	NA	53714148	53765844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.11	chr4	+	3938	1	NIC	ENSMUSG00000028414.18	novel	6080	10	NA	NA	-7	-44669	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGCGGGAAGAAAATAAA	10	True	NA	NA	False	AATAAA	-19	NA	53714180	53718118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53714200_53718100
ES.23416.13	chr4	+	6233	10	FSM	ENSMUSG00000028414.18	ENSMUST00000221657.2	6241	10	8	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	14.3819159423506	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	25	True	NA	5	True	AATAAA	-18	NA	53714195	53765785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53714547_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.14	chr4	+	5882	9	FSM	ENSMUSG00000028414.18	ENSMUST00000061771.9	3370	9	0	-2512	0	-2	multi-exon	FALSE	canonical	3	33	junction_1	5.65685424949238	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTGTGTTTGTTTTT	5834	False	NA	3	True	AATAAA	-16	NA	53720004	53765783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.15	chr4	+	5461	6	NNC	ENSMUSG00000028414.18	novel	3370	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	15.7175061635108	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTTTTGTGTTTGTTTT	5834	False	NA	2	True	AATAAA	-15	NA	53720004	53765782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737632_53761173
ES.23416.17	chr4	+	5820	8	NIC	ENSMUSG00000028414.18	novel	3370	9	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.4701337615227	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTTTGTGTTTGTTT	5834	False	NA	1	True	AATAAA	-14	NA	53720004	53765781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53720210_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.2	chr4	+	3147	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	152	2781	-13	217	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGGAAGTAACTTAAAG	-21	True	NA	NA	False	NA	NA	NA	53714149	53763004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.3	chr4	+	6287	2	ISM	ENSMUSG00000028414.18	ENSMUST00000107638.4	3326	12	-9	36536	-9	-36536	intron_retention	FALSE	canonical	3	30	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAGAAGAGGAG	-17	True	NA	NA	False	NA	NA	NA	53714153	53726251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_53714196_53720006
ES.23416.5	chr4	+	6041	11	ISM	ENSMUSG00000028414.18	ENSMUST00000222290.2	3123	12	8	12109	8	-4	5prime_fragment	FALSE	canonical	2	9	junction_2	14.4377976159801	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTTTGTGTTTGTTT	0	True	NA	1	True	AATAAA	-14	NA	53714170	53765781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_53714196_53720006_53720210_53724604_53724743_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.6	chr4	+	6113	10	NIC	ENSMUSG00000028414.18	novel	3326	12	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.7691604233623	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTTTGTGTTTGTTT	1	True	NA	1	True	AATAAA	-14	NA	53714171	53765781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53714196_53720006_53720210_53731131_53731336_53734849_53735128_53737526_53737660_53742495_53742767_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.7	chr4	+	5030	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	175	875	10	-875	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTGGAATGCTTCGT	2	True	NA	NA	False	NA	NA	NA	53714172	53764910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.8	chr4	+	5858	10	NNC	ENSMUSG00000028414.18	novel	6080	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4913767461894	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	4	True	NA	5	True	AATAAA	-18	NA	53714174	53765785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744663_53744749_53747008_53747143_53748368_53748497_53761173
ES.23416.9	chr4	+	5803	10	NNC	ENSMUSG00000028414.18	novel	6080	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.399931412731	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTTGTGTTTGTTTTT	4	True	NA	3	True	AATAAA	-16	NA	53714174	53765783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747106_53747143_53748368_53748497_53761173
ES.23417.1	chr4	-	190	1	Intergenic	novelGene_19230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGGTTCTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	53745122	53744932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53744900_53745100
ES.23418.1	chr4	-	184	1	Intergenic	novelGene_19231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATAGCAATCTTATT	NA	False	NA	NA	False	NA	NA	NA	53798903	53798719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53798700_53798900
ES.23419.1	chr4	+	2717	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-39	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	53.7139413932733	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGGGTATTCTTCTTCT	NA	False	NA	NA	False	ATTAAA	-32	NA	53826005	53862020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53826221_53840626_53840784_53850473_53850562_53854311_53854430_53859881
ES.23419.10	chr4	+	2769	6	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	59.5214247141313	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGGTATTCTTCT	9	True	NA	NA	False	ATTAAA	-29	NA	53826069	53862017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53826221_53827292_53827384_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.11	chr4	+	3291	1	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	16831	-1428	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTGTATACAGTTATT	NA	False	NA	4	True	AATAAA	-13	NA	53857300	53860591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53857300_53860600
ES.23419.2	chr4	+	2744	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-36	3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	42.4345083628879	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTATTCTTCTTCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	53826008	53862022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_53826221_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.3	chr4	+	2898	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-31	-5	-31	5	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTATTCTTCTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-36	NA	53826013	53862024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.4	chr4	+	3026	7	NNC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.5818258365143	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-37	True	NA	NA	False	ATTAAA	-31	NA	53826023	53862019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53826221_53837659_53837803_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.5	chr4	+	2345	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	-21	538	-21	-538	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACTAAGTGATAGAT	-37	True	NA	NA	False	ATTAAA	-38	NA	53826023	53861481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.6	chr4	+	1441	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	2	1419	2	-1419	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTATTTATTTTATA	-14	True	NA	13	True	AATAAA	-22	NA	53826046	53860600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.7	chr4	+	1574	7	NNC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	3	-1428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.5818258365143	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTGTATACAGTTATT	-13	True	NA	4	True	AATAAA	-13	NA	53826047	53860591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53826221_53837659_53837803_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.8	chr4	+	2179	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	5	678	5	-678	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTCAGCTCTCCTGA	-11	True	NA	NA	False	AATGAA	-16	NA	53826049	53861341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ES.23419.9	chr4	+	2961	7	NNC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.4356866612949	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-4	True	NA	NA	False	ATTAAA	-31	NA	53826056	53862019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_53826221_53837659_53837803_53840626_53840784_53848897_53849051_53850473_53850562_53854311_53854430_53859881
ES.2342.1	chr10	-	111	1	Intergenic	novelGene_1789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACACAAGGTAACTGGC	8174	False	NA	35	True	NA	NA	NA	12805432	12805321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12805300_12805400
ES.23420.1	chr4	-	173	1	Intergenic	novelGene_19232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAGATGAATGA	NA	False	NA	NA	False	NA	NA	NA	53880928	53880755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53880800_53880900
ES.23421.1	chr4	-	7849	3	Intergenic	novelGene_19233	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	5.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTGTGTTCTATT	NA	False	NA	NA	False	NA	NA	NA	53947482	53939233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53939690_53939874_53947050_53947264
ES.23421.2	chr4	-	8061	2	Intergenic	novelGene_19234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAAGGTGTTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	53947482	53939236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53939690_53939874
ES.23421.3	chr4	-	4999	1	Intergenic	novelGene_19235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTTTTCAGGATGGGT	NA	False	NA	NA	False	NA	NA	NA	53947484	53942485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53942500_53947500
ES.23421.4	chr4	-	1679	1	Intergenic	novelGene_19236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAGAGAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	53947156	53945477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_53945500_53947200
ES.23422.1	chr4	-	1854	1	Intergenic	novelGene_19237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGTTGA	NA	False	NA	NA	False	NA	NA	NA	54672060	54670206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_54670200_54672100
ES.23423.1	chr4	+	4035	4	Intergenic	novelGene_19238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACGTCAGAGCAGGCTGC	NA	False	NA	NA	False	AATGAA	-39	NA	54785792	54927873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_54789400_54893510_54893664_54893816_54893944_54927725
ES.23424.1	chr4	-	3837	6	Antisense	novelGene_ENSMUSG00000082111.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.8	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATCCTGATTTTTTCC	NA	False	NA	NA	False	ATTAAA	-19	NA	54927812	54842298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_54842655_54848775_54851664_54852105_54852330_54893508_54893664_54893816_54893941_54927722
ES.23424.2	chr4	-	4300	2	Antisense	novelGene_ENSMUSG00000082111.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTTGTCGGGTATT	NA	False	NA	NA	False	NA	NA	NA	54856305	54851563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_54851664_54852105
ES.23424.3	chr4	-	426	3	Antisense	novelGene_ENSMUSG00000082111.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTATGTTGTTTTGTCG	NA	False	NA	NA	False	NA	NA	NA	54854565	54851569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_54851664_54852105_54852330_54854457
ES.23425.1	chr4	+	176	1	Intergenic	novelGene_19239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	54929255	54929431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_54929300_54929400
ES.23426.1	chr4	+	7785	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	-12	-256	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGCTCCTTTCCTGTC	11	False	NA	8	True	ATTAAA	-20	NA	54945035	55081074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.10	chr4	+	10004	12	ISM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	59555	206	-3835	-206	3prime_fragment	FALSE	canonical	2	11	junction_1	7.75129954446989	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATTGACTCCAATAATCA	NA	False	NA	NA	False	AATAAA	-15	NA	55007530	55083357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.11	chr4	+	9799	12	ISM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	59558	408	-3832	-408	3prime_fragment	FALSE	canonical	2	11	junction_1	7.75129954446989	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTAGGATGTCATTTT	NA	False	NA	NA	False	AATAAA	-25	NA	55007533	55083155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.12	chr4	+	7772	10	NIC	ENSMUSG00000060206.12	novel	10465	13	NA	NA	-1116	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.5946643920535	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	956	False	NA	10	True	AATAAA	-19	NA	55010249	55083563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.13	chr4	+	4758	10	NNC	ENSMUSG00000060206.12	novel	10465	13	NA	NA	8	272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.1665284679121	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTTAATTACTAGATA	2194	False	NA	NA	False	NA	NA	NA	55011487	55081630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55050185_55050454_55051190_55051328_55059856_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.14	chr4	+	4692	11	ISM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	63947	1599	443	606	3prime_fragment	FALSE	canonical	2	11	junction_1	7.07177488329486	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACTTCCTTTTAAATTT	2629	False	NA	NA	False	TTTAAA	-19	NA	55011922	55081964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.15	chr4	+	5619	12	NNC	ENSMUSG00000060206.12	novel	10465	13	NA	NA	1185	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.6093436293415	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGCATCTGTTAA	3371	False	NA	8	True	AATAAA	-17	NA	55012664	55083561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55013850_55014682_55014848_55016813_55016886_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.16	chr4	+	3924	7	NNC	ENSMUSG00000060206.12	novel	10465	13	NA	NA	37353	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7851130197758	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGTGCATCTGTTA	3927	False	NA	7	True	AATAAA	-16	NA	55048832	55083560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55048976_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.2	chr4	+	10266	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	-17	True	NA	10	True	AATAAA	-19	NA	54945043	55083563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.3	chr4	+	2489	11	NIC	ENSMUSG00000060206.12	novel	363	3	NA	NA	-4	272	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.49526197637538	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTTAATTACTAGATA	-17	True	NA	NA	False	NA	NA	NA	54945043	55081630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.4	chr4	+	4728	13	NNC	ENSMUSG00000060206.12	novel	363	3	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.3949774196751	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTGCATCTGTTAAG	-14	True	NA	9	True	AATAAA	-18	NA	54945046	55083562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_54945102_55007532_55007783_55008255_55008316_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.5	chr4	+	2805	4	NIC	ENSMUSG00000060206.12	novel	363	3	NA	NA	-1	-405	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.0213499897497	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGGATGTCATTTTTTT	-14	True	NA	NA	False	AATAAA	-28	NA	54945046	55083158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55072972_55073106_55079263_55079388_55080665
ES.23426.6	chr4	+	8534	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	0	477	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGAGTTGTTCTCTGTGT	-13	True	NA	NA	False	NA	NA	NA	54945047	55081835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.7	chr4	+	4907	13	NNC	ENSMUSG00000060206.12	novel	363	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.8705400981683	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATCTGTTAAGT	-9	True	NA	10	True	AATAAA	-19	NA	54945051	55083563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_54945102_55007532_55007783_55008255_55008316_55014682_55014848_55016813_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.8	chr4	+	8311	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	18	272	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTTAATTACTAGATA	5	True	NA	NA	False	NA	NA	NA	54945065	55081630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ES.23426.9	chr4	+	1659	1	NIC	ENSMUSG00000060206.12	novel	363	3	NA	NA	32	-61576	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGTTTGGCTCTCT	19	True	NA	NA	False	AATAAA	-14	NA	54945079	54946738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_54945100_54946700
ES.23427.1	chr4	-	3178	1	Intergenic	novelGene_19240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	55055512	55052334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55052300_55055500
ES.23428.1	chr4	-	212	1	Intergenic	novelGene_19241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTACAATCTTACT	NA	False	NA	NA	False	NA	NA	NA	55099904	55099692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55099700_55099900
ES.23429.1	chr4	+	179	1	Intergenic	novelGene_19242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAACTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	55121657	55121836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55121700_55121800
ES.2343.1	chr10	+	186	1	Intergenic	novelGene_1790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	12840626	12840812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_12840600_12840800
ES.23430.1	chr4	-	2325	3	NNC	ENSMUSG00000087614.2	novel	568	2	NA	NA	203	1841	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	55135298	55129366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55129538_55129646_55131677_55135174
ES.23430.2	chr4	-	1606	3	NNC	ENSMUSG00000087614.2	novel	568	2	NA	NA	217	810	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGCTTTGGTCAAAATG	NA	False	NA	NA	False	NA	NA	NA	55135284	55130397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55131677_55134362_55134580_55135174
ES.23431.1	chr4	+	179	1	Intergenic	novelGene_19243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGAGCG	NA	False	NA	NA	False	NA	NA	NA	55200596	55200775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55200600_55200800
ES.23432.1	chr4	+	432	3	Antisense	novelGene_ENSMUSG00000087614.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCAGCATGGTTGG	NA	False	NA	NA	False	NA	NA	NA	55208102	55218423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_55208125_55217797_55217926_55218141
ES.23433.1	chr4	+	178	1	Intergenic	novelGene_19244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	55238872	55239050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55238900_55239000
ES.23434.1	chr4	+	174	1	Intergenic	novelGene_19245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55289560	55289734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55289600_55289700
ES.23435.1	chr4	-	173	1	Intergenic	novelGene_19246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGAGAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	55320696	55320523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55320500_55320700
ES.23436.1	chr4	+	3411	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	-304	703	-304	-703	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTAACTTTCATGTAT	NA	False	NA	22	True	AATAAA	-30	NA	55349738	55391534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.10	chr4	+	2260	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	0	-1482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	402.253375098057	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	NA	False	NA	15	True	AGTAAA	-7	NA	55350042	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378281_55381047_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.11	chr4	+	3806	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	1	3	1	-3	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGCATTTCTCATTT	-17	True	NA	27	True	TATAAA	-17	NA	55350043	55392234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.12	chr4	+	2148	10	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	3	-1482	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	367.852963110447	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	-15	True	NA	15	True	AGTAAA	-7	NA	55350045	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350251_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.13	chr4	+	2314	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	1	-1482	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_5	380.826716045922	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	-10	True	NA	15	True	AGTAAA	-7	NA	55350050	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380994_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.14	chr4	+	6600	9	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	10	1482	1	-1482	intron_retention	FALSE	canonical	3	1075	junction_8	120.692727100683	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	-8	True	NA	15	True	AGTAAA	-7	NA	55350052	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409
ES.23436.15	chr4	+	3098	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	2	-711	at_least_one_novel_splicesite	FALSE	canonical	1	48	junction_9	396.813636016197	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTACCATGTTTAACTT	-7	True	NA	14	True	AATAAA	-22	NA	55350053	55391526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385612_55389883
ES.23436.16	chr4	+	2494	11	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	9	-1032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	390.427009823859	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGTTGGCTTTTA	0	True	NA	30	True	ATTAAA	-12	NA	55350060	55391205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883_55390830_55391095
ES.23436.17	chr4	+	2289	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	9	-1482	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_2	406.379953573828	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	0	True	NA	15	True	AGTAAA	-7	NA	55350060	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366838_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.18	chr4	+	2188	9	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	9	-1482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	420.72613940068	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	0	True	NA	15	True	AGTAAA	-7	NA	55350060	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55382473_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.19	chr4	+	2725	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	11	-1046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	411.505366510167	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAATCTCAATCAC	2	True	NA	16	True	AATATA	-26	NA	55350062	55391191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382597_55383586_55383715_55385409_55385602_55389883
ES.23436.2	chr4	+	3008	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	-223	1025	-223	-1025	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCTTTTATTTGGAT	NA	False	NA	37	True	ATTAAA	-19	NA	55349819	55391212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.20	chr4	+	5457	9	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	13	-1030	intron_retention	FALSE	canonical	3	1075	junction_7	115.848432768855	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGTTGGCTTTTATT	4	True	NA	32	True	ATTAAA	-14	NA	55350064	55391207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.21	chr4	+	2809	8	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	16	-712	combination_of_known_splicesites	FALSE	canonical	1	13	junction_5	444.55398423359	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTACCATGTTTAACT	7	True	NA	13	True	AATAAA	-21	NA	55350067	55391525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55383586_55383715_55385409_55385602_55389883
ES.23436.23	chr4	+	2710	8	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	17	-705	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	461.873337173555	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTTAACTTTCATGT	8	True	NA	20	True	AATAAA	-28	NA	55350068	55391532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55385514_55385602_55389883
ES.23436.24	chr4	+	2582	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	47	1181	0	-1181	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAGGTGGGTGGAAC	29	False	NA	NA	False	ATTAAA	-24	NA	55350089	55391056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.25	chr4	+	2208	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	69	-1471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	402.253375098057	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTTTGCTTTTGATGT	98	False	NA	26	True	AGTAAA	-18	NA	55350158	55390766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378281_55380994_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.26	chr4	+	1944	9	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	16733	1482	16686	-1482	3prime_fragment	FALSE	canonical	3	1075	junction_7	103.125454544453	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACCATTGCATGTTT	NA	False	NA	15	True	AGTAAA	-7	NA	55366775	55390755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.27	chr4	+	2721	9	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	16733	705	16686	-705	3prime_fragment	FALSE	canonical	3	1075	junction_7	103.125454544453	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTTAACTTTCATGT	NA	False	NA	20	True	AATAAA	-28	NA	55366775	55391532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.28	chr4	+	1000	2	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	35397	-1479	at_least_one_novel_splicesite	FALSE	canonical	1	48	junction_1	0	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCATTGCATGTTTGCT	7154	False	NA	18	True	AGTAAA	-10	NA	55385486	55390758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55385612_55389883
ES.23436.29	chr4	+	4740	1	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	36378	-1030	mono-exon	FALSE	NA	NA	NA	NA	NA	859	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGTTGGCTTTTATT	8135	False	NA	32	True	ATTAAA	-14	NA	55386467	55391207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55386500_55391200
ES.23436.3	chr4	+	2385	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	-38	1463	-38	-1463	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGATGTATCCCTTT	NA	False	NA	34	True	AGTAAA	-26	NA	55350004	55390774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.4	chr4	+	2502	7	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	-38	-1026	combination_of_known_splicesites	FALSE	canonical	1	10	junction_4	460.672606088098	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGCTTTTATTTGGA	NA	False	NA	36	True	ATTAAA	-18	NA	55350004	55391211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55383586_55383715_55385409_55385602_55389883
ES.23436.5	chr4	+	3431	8	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	-38	-1475	intron_retention	FALSE	canonical	0	0	junction_4	448.006286399043	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCATGTTTGCTTTTG	NA	False	NA	22	True	AGTAAA	-14	NA	55350004	55390762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350428_55366776_55368125_55370203_55370473_55378233_55378290_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.6	chr4	+	3126	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	-34	-712	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_5	380.826716045922	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTACCATGTTTAACT	NA	False	NA	13	True	AATAAA	-21	NA	55350008	55391525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380994_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.7	chr4	+	3665	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	407.615317319627	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCATTTCTCATTTT	NA	False	NA	28	True	TATAAA	-18	NA	55350020	55392235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381064_55382591_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.8	chr4	+	2615	10	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	-10	-1028	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	367.852963110447	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGGCTTTTATTTG	NA	False	NA	34	True	ATTAAA	-16	NA	55350032	55391209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_55350251_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23436.9	chr4	+	2175	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	-3	1638	-3	-1638	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTCTTGATTATTGAA	NA	False	NA	NA	False	NA	NA	NA	55350039	55390599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ES.23437.1	chr4	-	6328	2	Antisense	novelGene_ENSMUSG00000028426.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGGAAACCC	NA	False	NA	NA	False	NA	NA	NA	55357687	55351310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_55352961_55353009
ES.23437.2	chr4	-	5815	3	Antisense	novelGene_ENSMUSG00000028426.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	55357687	55351325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_55352961_55353009_55356215_55356712
ES.23438.1	chr4	-	3997	1	Antisense	novelGene_ENSMUSG00000028426.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCCTTGCCTGGCATGG	NA	False	NA	NA	False	AATAAA	-40	NA	55370315	55366318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_55366300_55370300
ES.23439.1	chr4	-	4080	1	Intergenic	novelGene_19247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55375139	55371059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55371100_55375100
ES.2344.1	chr10	-	182	1	Intergenic	novelGene_1791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGATTAAGACAG	NA	False	NA	NA	False	NA	NA	NA	12854530	12854348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12854300_12854500
ES.23440.1	chr4	-	1178	1	Intergenic	novelGene_19248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCTACCATGGACCTAA	NA	False	NA	NA	False	AAAAAG	-4	NA	55385308	55384130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55384100_55385300
ES.23441.1	chr4	-	802	1	Intergenic	novelGene_19249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGGGATGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	55461937	55461135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55461100_55461900
ES.23442.1	chr4	+	2472	1	Intergenic	novelGene_19250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACTCATGTCCTGTGAG	1556	False	NA	NA	False	NA	NA	NA	55479748	55482220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55479700_55482200
ES.23443.1	chr4	+	2542	1	Antisense	novelGene_ENSMUSG00000003032.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGTTGTAAACTCTTA	NA	False	NA	NA	False	TATAAA	-45	NA	55529526	55532068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_55529500_55532100
ES.23443.2	chr4	+	1722	2	NNC	ENSMUSG00000066176.4	novel	1603	2	NA	NA	-32604	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTGAGCAAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	55530660	55599294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_55531155_55598066
ES.23443.3	chr4	+	1977	2	Intergenic	novelGene_19251	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAACCAAGTGTGTTCTT	9	True	NA	NA	False	AATAAA	-24	NA	55532746	55541752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_55532836_55539864
ES.23444.1	chr4	-	4626	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	192	-1789	179	1789	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTTTTCTTTGTAAT	1052	False	NA	NA	False	AATAAA	-15	NA	55532274	55525353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.11	chr4	-	4207	5	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.612908264915	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	793	False	NA	-7	True	AATAAA	-21	NA	55532533	55527142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528685_55528990_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.12	chr4	-	2967	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-61	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	560.618111254593	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACAATCTCTTTGTTTT	799	False	NA	-9	True	AATAAA	-19	NA	55532527	55527144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531866
ES.23444.14	chr4	-	2472	4	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	135	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	566.724702910407	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACAATCTCTTTGTTTT	1691	False	NA	-9	True	AATAAA	-19	NA	55531635	55527144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531469
ES.23444.17	chr4	-	3150	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	1236	junction_3	31.7104959840674	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACAATCTCTTTGTTTT	2	True	NA	-9	True	AATAAA	-19	NA	55532473	55527144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_55528301_55529717_55530984_55531629_55531751_55531866
ES.23444.18	chr4	-	2907	6	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	497.373742772977	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACAATCTCTTTGTTTT	-3	True	NA	-9	True	AATAAA	-19	NA	55532478	55527144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866_55532323_55532454
ES.23444.2	chr4	-	4614	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-9	-1576	-9	1576	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAACACGAAAAAGTGA	0	True	NA	NA	False	AATAAA	-9	NA	55532475	55525566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.20	chr4	-	5026	2	NNC	ENSMUSG00000003032.9	novel	859	2	NA	NA	-11	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGACAATCTCTTTGTTT	-2	True	NA	-10	True	AATAAA	-18	NA	55532477	55527145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528685_55528990
ES.23444.21	chr4	-	3067	5	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	549.602299394753	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGACAATCTCTTTGTTT	2	True	NA	-10	True	AATAAA	-18	NA	55532473	55527145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529917_55529998_55530984_55531629_55531751_55531866
ES.23444.22	chr4	-	4909	3	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-11	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	570	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGACAATCTCTTTGTT	-2	True	NA	-11	True	AATAAA	-17	NA	55532477	55527146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528685_55528990_55529883_55529998
ES.23444.23	chr4	-	2444	4	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	241	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	566.724702910407	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGACAATCTCTTTGTT	1797	False	NA	-11	True	AATAAA	-17	NA	55531529	55527146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531389
ES.23444.24	chr4	-	3042	5	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	526.064634812111	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAACGACAATCTCTTT	-2	True	NA	-14	True	AATAAA	-14	NA	55532477	55527149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530993_55531629_55531751_55531866
ES.23444.25	chr4	-	3014	5	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	526.064634812111	1457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACGACAATCTCTT	2	True	NA	-15	True	AATAAA	-13	NA	55532473	55527150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531643_55531751_55531866
ES.23444.26	chr4	-	2799	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-12	-121	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	560.618111254593	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATTTTGTATATTTGT	-3	True	NA	NA	False	AATAAA	-24	NA	55532478	55527263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531866
ES.23444.27	chr4	-	3053	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-145	121	-145	-121	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATTTTGTATATTTGT	715	False	NA	NA	False	AATAAA	-24	NA	55532611	55527263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.28	chr4	-	2509	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-11	531	-11	-531	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGTATGCTCTTTGC	-2	True	NA	-21	True	AATACA	-11	NA	55532477	55527673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.29	chr4	-	2331	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-40	738	-40	-738	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGAACAGATGGGGTCT	820	False	NA	NA	False	NA	NA	NA	55532506	55527880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.3	chr4	-	3565	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	-530	-6	-530	6	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTTTTTTC	330	False	NA	-1	True	AATAAA	-27	NA	55532996	55527136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ES.23444.30	chr4	-	3232	4	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-12	-799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	534.363380315514	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAGAAATACTAAAAAC	-3	True	NA	NA	False	NA	NA	NA	55532478	55527941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528685_55528990_55529883_55529998_55530984_55531866
ES.23444.4	chr4	-	3693	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-12	6	intron_retention	FALSE	canonical	3	1140	junction_2	50.6315667894601	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTTTTTTC	-3	True	NA	-1	True	AATAAA	-27	NA	55532478	55527136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_55528301_55529717_55529883_55529998_55531751_55531866
ES.23444.9	chr4	-	2444	4	NNC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	566.724702910407	1457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTCTTTGTTTTTTTT	0	True	NA	-5	True	AATAAA	-23	NA	55532475	55527140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_55528301_55529717_55529883_55529998_55530611_55531968
ES.23445.1	chr4	-	175	1	Intergenic	novelGene_19252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGTCTACATTATT	NA	False	NA	NA	False	NA	NA	NA	55966594	55966419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_55966400_55966600
ES.23446.1	chr4	-	1389	1	FSM	ENSMUSG00000070980.5	ENSMUST00000095080.5	1439	1	47	3	47	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGTCATGTCTGGTCTG	50	False	NA	NA	False	CATAAA	-12	NA	56741396	56740007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56740000_56741400
ES.23447.1	chr4	+	3647	1	Antisense	novelGene_ENSMUSG00000028431.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTACCACACTTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	56767778	56771425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_56767800_56771400
ES.23448.1	chr4	+	4304	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-27	-2	-23	2	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTCTGTGTACGTTTT	0	True	NA	15	True	AATAAA	-24	NA	56802321	56809603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.10	chr4	+	2853	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	43	1379	40	-1379	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCCCAGTTATTCTGT	43	False	NA	NA	False	NA	NA	NA	56802391	56808222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.11	chr4	+	2160	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	124	1991	121	1663	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCACGTCCACGGCAGC	124	False	NA	NA	False	NA	NA	NA	56802472	56807610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.12	chr4	+	2750	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	230	1380	-36	-1380	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTCCCAGTTATTCTG	-10	True	NA	NA	False	NA	NA	NA	56802581	56808221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.13	chr4	+	4122	7	NIC	ENSMUSG00000038827.12	novel	522	6	NA	NA	-36	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	64.5204532601011	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGGCTTTCTGTGTA	-10	True	NA	9	True	AATAAA	-18	NA	56802581	56809597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_56802727_56803595_56803648_56804153_56804284_56805313_56805398_56805681_56805759_56805877_56805948_56806033
ES.23448.2	chr4	+	2598	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-26	1703	-22	-1703	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGATAATATCTCGTGG	1	True	NA	NA	False	NA	NA	NA	56802322	56807898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.3	chr4	+	2551	5	NIC	ENSMUSG00000038827.12	novel	4275	6	NA	NA	-13	515	intron_retention	FALSE	canonical	3	125	junction_2	12.1114615137893	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGTTTCTCATTGGC	10	False	NA	1	True	AAAACA	-19	NA	56802331	56806462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_56802727_56803595_56803648_56804153_56805759_56805877_56805948_56806033
ES.23448.4	chr4	+	2988	7	NIC	ENSMUSG00000038827.12	novel	522	6	NA	NA	-10	-1385	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	64.5204532601011	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGACTCCTCCCAGTTA	13	False	NA	NA	False	NA	NA	NA	56802334	56808216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_56802727_56803595_56803648_56804153_56804284_56805313_56805398_56805681_56805759_56805877_56805948_56806033
ES.23448.5	chr4	+	4305	6	NNC	ENSMUSG00000038827.12	novel	4275	6	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.5459105506313	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGGCTTTCTGTGTA	-10	True	NA	9	True	AATAAA	-18	NA	56802338	56809597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_56802727_56803595_56803648_56804129_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.6	chr4	+	1146	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	-10	3139	-6	515	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACAGTTTCTCATTGGC	-10	True	NA	1	True	AAAACA	-19	NA	56802338	56806462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.7	chr4	+	7251	1	NIC	ENSMUSG00000038827.12	novel	4275	6	NA	NA	-1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	2	True	NA	13	True	AATAAA	-22	NA	56802350	56809601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_56802400_56809600
ES.23448.8	chr4	+	4361	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	2	True	NA	13	True	AATAAA	-22	NA	56802350	56809601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ES.23448.9	chr4	+	6181	4	NIC	ENSMUSG00000038827.12	novel	4275	6	NA	NA	-1	4	intron_retention	FALSE	canonical	3	128	junction_3	11.5854314646552	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTGTGTACGTTTTTC	2	True	NA	17	True	AATAAA	-26	NA	56802350	56809605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_56802727_56803595_56805759_56805877_56805948_56806033
ES.23449.1	chr4	-	5485	3	FSM	ENSMUSG00000028431.12	ENSMUST00000171411.8	953	3	12	-4544	12	3212	multi-exon	FALSE	canonical	3	350	junction_1	22.5	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTGTATCAGTGTTT	81	False	NA	NA	False	AATACA	-12	NA	56757273	56746467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116
ES.23449.10	chr4	-	6129	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	32	-1	32	1	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTCTCTTCTGCTGAA	-6	True	NA	NA	False	AATGAA	-16	NA	56802299	56749678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.11	chr4	-	5955	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	-47	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTGACAATTTTATATT	6	True	NA	NA	False	NA	NA	NA	56802287	56749726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.12	chr4	-	5616	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	23	521	23	-521	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCCTCCATAGACTCA	-15	True	NA	NA	False	NA	NA	NA	56802308	56750200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.13	chr4	-	5494	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	29	637	29	-637	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTGAGAGAGTGTTAG	-9	True	NA	NA	False	NA	NA	NA	56802302	56750316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.14	chr4	-	7781	32	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	35	-660	intron_retention	FALSE	canonical	3	245	junction_19	38.6420646074714	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAACTTTGGACTTTT	-3	True	NA	NA	False	NA	NA	NA	56802296	56750339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56773337_56774521_56774602_56774687_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.16	chr4	-	2847	5	ISM	ENSMUSG00000028431.12	ENSMUST00000150002.8	1841	8	3199	-615	-1740	612	intron_retention	FALSE	canonical	3	350	junction_1	22.8623598956888	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGCTTTTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56760131	56750399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963
ES.23449.17	chr4	-	3093	18	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-2453	612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.9667285325521	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGCTTTTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	56775069	56750399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755373_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016
ES.23449.18	chr4	-	5359	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	32	611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.3268210589486	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGCTTTTTGGTTTT	-6	True	NA	NA	False	NA	NA	NA	56802299	56750400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757224_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.19	chr4	-	5288	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	-216	1088	-216	244	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTACTAGCTTTAATT	NA	False	NA	0	True	ATTAAA	-20	NA	56802547	56750767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.2	chr4	-	7310	30	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-11272	3129	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.1167585120441	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGAGACTGTCTTTT	NA	False	NA	NA	False	ACTAAA	-11	NA	56791011	56746550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56747454_56748506_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887
ES.23449.20	chr4	-	5334	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-241	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.7524428730275	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTGCTACTAGCTTTA	NA	False	NA	-3	True	ATTAAA	-17	NA	56802572	56750770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759939_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.23	chr4	-	5625	35	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	23	236	intron_retention	FALSE	canonical	3	245	junction_22	37.1744694174724	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	-15	True	NA	-8	True	ATTAAA	-12	NA	56802308	56750775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.25	chr4	-	6883	35	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	56	236	intron_retention	FALSE	canonical	3	245	junction_24	37.1143025434562	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	18	True	NA	-8	True	ATTAAA	-12	NA	56802275	56750775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.27	chr4	-	4911	36	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	32	236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.1622713193408	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	-6	True	NA	-8	True	ATTAAA	-12	NA	56802299	56750775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755373_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.28	chr4	-	4921	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	29	236	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTTATGTGCTACTAG	-9	True	NA	-8	True	ATTAAA	-12	NA	56802302	56750775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.3	chr4	-	7414	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	35	-1289	35	1289	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGATTAGATTTTGCTC	-3	True	NA	NA	False	NA	NA	NA	56802296	56748390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.30	chr4	-	5029	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	55	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.8022633349587	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTATGTGCTACTA	17	True	NA	-9	True	ATTAAA	-11	NA	56802276	56750776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767898_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.31	chr4	-	7062	33	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	14	235	intron_retention	FALSE	canonical	0	0	junction_26	68.5188657300856	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTATGTGCTACTA	10	False	56802327	-9	True	ATTAAA	-11	NA	56802317	56750776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791025_56792026_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.32	chr4	-	5004	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	55	225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	62.9734413938738	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTATCCTACCTTGTTA	17	True	NA	-19	True	ATTAAA	-1	NA	56802276	56750786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769222_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.33	chr4	-	4408	38	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9553121924466	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTATCCTACCTTG	6	True	NA	-22	True	TTTAAA	-16	NA	56802287	56750789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56750914_56751511_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.34	chr4	-	5085	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	-248	1323	-248	9	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGGTAAAGAGCGGTT	NA	False	NA	-9	True	AATAAA	-27	NA	56802579	56751002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.35	chr4	-	4767	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	64.8125264146285	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	6	True	NA	-10	True	AATAAA	-26	NA	56802287	56751003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792409_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.37	chr4	-	4687	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	35	8	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	-3	True	NA	-10	True	AATAAA	-26	NA	56802296	56751003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.38	chr4	-	6033	33	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	3585	8	intron_retention	FALSE	canonical	3	245	junction_24	37.0355482737532	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	3581	False	NA	-10	True	AATAAA	-26	NA	56798746	56751003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792482_56794089_56795587_56796503_56796586_56798657
ES.23449.39	chr4	-	4751	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	68	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	83.2158431021995	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	64	False	NA	-10	True	AATAAA	-26	NA	56802263	56751003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790893_56791012_56792026_56792107_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.40	chr4	-	8265	33	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	14	8	intron_retention	FALSE	canonical	3	245	junction_20	37.4890478798475	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTGGTAAAGAGCGGT	10	False	56802327	-10	True	AATAAA	-26	NA	56802317	56751003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56773102_56773198_56774602_56774687_56774767_56775016_56775091_56775424_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.41	chr4	-	4706	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	55	7	combination_of_known_splicesites	FALSE	canonical	2	6	junction_17	64.8256940745327	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGTGGTAAAGAGCGG	17	True	NA	-11	True	AATAAA	-25	NA	56802276	56751004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.42	chr4	-	4679	35	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	2273	6	intron_retention	FALSE	canonical	3	245	junction_23	37.375965576399	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAGTGGTAAAGAGCG	2269	False	NA	-12	True	AATAAA	-24	NA	56800058	56751005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974
ES.23449.43	chr4	-	4037	16	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	3263	6	intron_retention	FALSE	canonical	3	18	junction_5	90.775033278246	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAGTGGTAAAGAGCG	NA	False	NA	-12	True	AATAAA	-24	NA	56776476	56751005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687
ES.23449.44	chr4	-	4714	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	54	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.8125264146285	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAGTGGTAAAGAGCG	16	True	NA	-12	True	AATAAA	-24	NA	56802277	56751005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775533_56776747_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.45	chr4	-	7867	32	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	2	intron_retention	FALSE	canonical	3	245	junction_21	38.4617057548591	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACTCAGTGGTAAAG	6	True	NA	-16	True	AATAAA	-20	NA	56802287	56751009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.46	chr4	-	6531	34	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	32	2	intron_retention	FALSE	canonical	3	245	junction_21	37.5676677508566	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACTCAGTGGTAAAG	-6	True	NA	-16	True	AATAAA	-20	NA	56802299	56751009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.48	chr4	-	3545	26	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-8154	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	74.5396538763093	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACTCAGTGGTAAAG	1319	False	NA	-16	True	AATAAA	-20	NA	56787893	56751009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740
ES.23449.49	chr4	-	4573	33	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	5765	2	intron_retention	FALSE	canonical	2	7	junction_13	67.124934532091	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGACTCAGTGGTAAAG	5761	False	NA	-16	True	AATAAA	-20	NA	56796566	56751009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773031_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792482_56794089_56794176_56795505_56795587_56796503
ES.23449.5	chr4	-	7309	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	14	1277	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTATGCAGGAT	10	False	56802327	NA	False	NA	NA	NA	56802317	56748402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.51	chr4	-	3561	27	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-8131	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	73.6296505749347	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	1342	False	NA	-17	True	AATAAA	-19	NA	56787870	56751010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781195_56784537_56784638_56786587_56786753_56787740
ES.23449.53	chr4	-	4990	35	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	14	1	intron_retention	FALSE	canonical	0	0	junction_18	83.6786984092968	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	10	False	56802327	-17	True	AATAAA	-19	NA	56802317	56751010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775563_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.55	chr4	-	5956	33	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	40	1	intron_retention	FALSE	canonical	3	245	junction_20	38.2107514115792	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	2	True	NA	-17	True	AATAAA	-19	NA	56802291	56751010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56773337_56774521_56774602_56774687_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.56	chr4	-	3232	25	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-4257	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	76.245753524741	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	5216	False	NA	-17	True	AATAAA	-19	NA	56783996	56751010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56783953
ES.23449.58	chr4	-	6280	35	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	32	1	intron_retention	FALSE	canonical	3	245	junction_22	37.0222975925474	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGACTCAGTGGTAAA	-6	True	NA	-17	True	AATAAA	-19	NA	56802299	56751010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.60	chr4	-	4835	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.783560586172	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	-4	True	NA	-18	True	AATAAA	-18	NA	56802297	56751011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775132_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.61	chr4	-	2414	6	NNC	ENSMUSG00000028431.12	novel	1841	8	NA	NA	-2424	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	151.288333985142	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	56760815	56751011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759376_56759880
ES.23449.62	chr4	-	6521	34	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	57	0	intron_retention	FALSE	canonical	3	245	junction_22	37.3995133609074	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	19	True	NA	-18	True	AATAAA	-18	NA	56802274	56751011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.63	chr4	-	4751	36	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	82.1176060567391	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	236	False	NA	-18	True	AATAAA	-18	NA	56802091	56751011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56801881
ES.23449.66	chr4	-	4852	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	252	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_36	64.4744362681735	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAATTGACTCAGTGGTA	248	False	NA	-19	True	AATAAA	-17	NA	56802079	56751012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56801881
ES.23449.67	chr4	-	5116	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	44	1	intron_retention	FALSE	canonical	3	245	junction_23	36.6531898547809	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTGACTCAGTGGT	6	True	NA	-20	True	AATAAA	-16	NA	56802287	56751013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.69	chr4	-	9321	33	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	39	1	intron_retention	FALSE	canonical	0	0	junction_29	68.5313568740617	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTGACTCAGTGGT	1	True	NA	-20	True	AATAAA	-16	NA	56802292	56751013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795579_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.7	chr4	-	6760	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	54	-654	54	654	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGACTCGTCCTGTA	16	True	NA	NA	False	AATATA	-19	NA	56802277	56749025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.71	chr4	-	4783	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	62.9734413938738	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTGACTCAGTGGT	-2	True	NA	-20	True	AATAAA	-16	NA	56802295	56751013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770987_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.72	chr4	-	3495	27	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-8053	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	75.0120798950243	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTGACTCAGTGGT	1420	False	NA	-20	True	AATAAA	-16	NA	56787792	56751013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775083_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740
ES.23449.73	chr4	-	4744	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.7592823287581	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAATTGACTCAGTGG	-1	True	NA	-21	True	AATAAA	-15	NA	56802294	56751014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757224_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786583_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.74	chr4	-	4676	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	23	1461	23	-126	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTGTTAACATAGTG	-15	True	NA	0	True	NA	NA	NA	56802308	56751140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.75	chr4	-	4474	36	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	52	-131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	82.3314158800657	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTCTGTGTTGTTAACA	14	True	NA	-5	True	NA	NA	NA	56802279	56751145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800142_56802216
ES.23449.76	chr4	-	4846	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-228	-133	combination_of_known_splicesites	FALSE	canonical	2	6	junction_17	64.8256940745327	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTCTGTGTTGTTAA	NA	False	NA	-7	True	NA	NA	NA	56802559	56751147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.77	chr4	-	4326	34	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	55	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	111.797189455943	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCACGTTTCTAAGTTG	17	True	NA	-21	True	NA	NA	NA	56802276	56751161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775424_56775541_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786590_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.78	chr4	-	4525	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	55	1580	55	-245	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCTTGGACAGCTCAT	17	True	NA	-119	True	NA	NA	NA	56802276	56751259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.79	chr4	-	4784	25	ISM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	15705	3459	-6887	1729	internal_fragment	FALSE	canonical	3	245	junction_23	41.1131357421877	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGTTATTTTATAAC	2586	False	NA	NA	False	AATACA	-19	NA	56786626	56753138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587
ES.23449.8	chr4	-	5217	14	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	-1832	646	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	101.472647668483	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTCTACTTTTGACTC	NA	False	NA	NA	False	AATATA	-11	NA	56774448	56749033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56773015_56773102_56773198
ES.23449.80	chr4	-	2172	10	ISM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	22	39401	22	-12615	5prime_fragment	FALSE	canonical	3	280	junction_5	22.7438772116208	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTCAGAATTGGATT	-16	True	NA	NA	False	AATAAA	-17	NA	56802309	56789080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.81	chr4	-	3313	8	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	43	-12637	intron_retention	FALSE	canonical	3	280	junction_4	25.3320801695061	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAATGAAACACA	5	True	NA	NA	False	NA	NA	NA	56802288	56789102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56790225_56790887_56791012_56792026_56792482_56794089_56794176_56795505_56796586_56798657_56798811_56799974_56800138_56802158
ES.23449.9	chr4	-	6342	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	55	-237	55	237	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTTTCATTACTCTGT	17	True	NA	NA	False	GATAAA	-28	NA	56802276	56749442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ES.2345.1	chr10	+	801	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3047	-7	3047	7	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGATTGCTGTGTTCTT	NA	False	NA	30	True	TATAAA	-25	NA	12884133	12884934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_12884100_12884900
ES.23450.1	chr4	+	174	1	Intergenic	novelGene_19253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGAGTTAGGTGG	NA	False	NA	NA	False	NA	NA	NA	56853603	56853777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_56853600_56853800
ES.23451.1	chr4	+	3048	2	Antisense	novelGene_ENSMUSG00000055296.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCAGCCACCAGCCAT	NA	False	NA	NA	False	NA	NA	NA	56874676	56877936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_56875667_56875878
ES.23451.2	chr4	+	465	1	Antisense	novelGene_ENSMUSG00000055296.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAATGAAATCAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	56874677	56875142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_56874700_56875100
ES.23452.1	chr4	-	3383	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-8	True	NA	-6	True	AATAAA	-21	NA	56846084	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.11	chr4	-	3814	20	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	84.5005531952585	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCATACCGACTGGCTT	19	True	NA	-9	True	AATAAA	-18	NA	56865152	56810937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56815802_56815992_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.12	chr4	-	4758	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-34	-3	intron_retention	FALSE	canonical	3	197	junction_14	26.3638370332201	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCATACCGACTGGCTT	9395	False	NA	-9	True	AATAAA	-18	NA	56865222	56810937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.15	chr4	-	3405	19	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	25	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	94.5058623826658	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCATACCGACTGGCT	9	True	NA	-10	True	AATAAA	-17	NA	56846067	56810938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838004_56838048_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.17	chr4	-	5889	33	Fusion	ENSMUSG00000038816.15_ENSMUSG00000055296.15	novel	3664	19	NA	NA	2	-4	multi-exon	FALSE	canonical	0	0	junction_18	107.918788186997	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCATACCGACTGGCT	7	True	NA	-10	True	AATAAA	-17	NA	56947422	56810938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56880203_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56946844
ES.23452.2	chr4	-	11486	10	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-3195	0	intron_retention	FALSE	canonical	3	249	junction_6	14.1578403877302	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	56833048	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56826425_56827251_56827345_56829483_56829643_56832905
ES.23452.21	chr4	-	3430	18	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	78.8175590364022	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTCATACCGACTGGC	4	True	NA	-11	True	AATAAA	-16	NA	56846072	56810939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844382_56844635_56845963
ES.23452.23	chr4	-	3188	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-75	551	-75	-551	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTAAACCTTTTCTTG	9354	False	NA	0	True	AATAAA	-23	NA	56865263	56811485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.24	chr4	-	2831	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	8	-552	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTTAAACCTTTTCTT	-8	True	NA	-1	True	AATAAA	-22	NA	56846084	56811486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.25	chr4	-	3927	7	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	45373	555	-2159	-555	3prime_fragment	FALSE	canonical	3	249	junction_6	12.6677631104399	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGATTTAAACCTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	56819815	56811489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246
ES.23452.27	chr4	-	3100	19	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-34	-557	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	64.6546380565402	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAGGATTTAAACCTT	9395	False	NA	-6	True	AATAAA	-17	NA	56865222	56811491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826384_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.28	chr4	-	4213	24	Fusion	ENSMUSG00000038816.15_ENSMUSG00000055296.15	novel	3664	19	NA	NA	6	-557	multi-exon	FALSE	canonical	0	0	junction_18	97.047374084182	528	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAGGATTTAAACCTT	11	True	NA	-6	True	AATAAA	-17	NA	56947418	56811491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.29	chr4	-	3888	17	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	9	-557	intron_retention	FALSE	canonical	3	86	junction_16	50.793085159301	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAGGATTTAAACCTT	-7	True	NA	-6	True	AATAAA	-17	NA	56846083	56811491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.3	chr4	-	3595	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	66.7233611294817	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-32	True	NA	-6	True	AATAAA	-21	NA	56865203	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.31	chr4	-	3144	19	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-11	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.3797762225666	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTAGGATTTAAACCT	-28	True	NA	-7	True	AATAAA	-16	NA	56865199	56811492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844662_56847809_56848000_56864976
ES.23452.32	chr4	-	3071	19	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	2	-558	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	66.3797762225666	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTAGGATTTAAACCT	5	True	NA	-7	True	AATAAA	-16	NA	56865166	56811492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844630_56847817_56848000_56864976
ES.23452.33	chr4	-	5056	10	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	9	1460	combination_of_known_junctions	FALSE	canonical	3	86	junction_9	65.1103526690753	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTCAGCAGAGTTTTT	-7	True	NA	NA	False	AATAAA	-14	NA	56846083	56822597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.34	chr4	-	1921	11	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	13	15067	-7	1	5prime_fragment	FALSE	canonical	3	197	junction_7	32.0661815625122	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGATTTCCTACTGAA	-4	True	NA	NA	False	AATAAA	-19	NA	56865175	56826001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.35	chr4	-	2638	9	NIC	ENSMUSG00000038816.15	novel	1956	12	NA	NA	9	-76	intron_retention	FALSE	canonical	3	86	junction_8	68.1097459986455	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTATTGTTTTGTTCTT	-7	True	NA	NA	False	AATAAA	-24	NA	56846083	56826078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.36	chr4	-	212	1	Intergenic	novelGene_19254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAACAAAAAGT	7514	False	NA	NA	False	NA	NA	NA	56857657	56857445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_56857400_56857700
ES.23452.37	chr4	-	5959	1	Genic_Genomic	ENSMUSG00000055296.15	novel	NA	NA	NA	NA	50581	4	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAACTTAGCCTCCTCT	1740	False	NA	NA	False	AATAAA	-25	NA	56872877	56866918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_56866900_56872900
ES.23452.38	chr4	-	5841	2	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	50657	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTGATAAACTTAGCCTC	1816	False	NA	NA	False	AATAAA	-21	NA	56872801	56866922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56869341_56869378
ES.23452.39	chr4	-	8464	2	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	48033	-3	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	0	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCGGTGATAAACTTAGC	NA	False	NA	NA	False	AATAAA	-18	NA	56875425	56866925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56869341_56869376
ES.23452.4	chr4	-	4695	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-9	0	intron_retention	FALSE	canonical	1	3	junction_9	66.1158153399191	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-26	True	NA	-6	True	AATAAA	-21	NA	56865197	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826384_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.40	chr4	-	6699	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	73715	101	49736	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTTCTTAGCTTTAAT	895	False	NA	NA	False	AATAAA	-19	NA	56873722	56867023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56867000_56873700
ES.23452.41	chr4	-	6923	2	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	49473	-104	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	0	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCGTTTCTTAGCTTT	632	False	NA	NA	False	AATAAA	-16	NA	56873985	56867026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56869341_56869376
ES.23452.42	chr4	-	7278	18	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	2	4488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8927037783204	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGGAGCATTTATTGG	-6	True	NA	NA	False	NA	NA	NA	56947435	56875387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56875674_56875885_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.43	chr4	-	7303	19	NNC	ENSMUSG00000055296.15	novel	2643	18	NA	NA	-1	4486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.4296518838489	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTGGGAGCATTTATT	4	True	NA	NA	False	NA	NA	NA	56947425	56875389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56875676_56875886_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903211_56903248_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.44	chr4	-	178	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	71563	8774	47584	4179	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56875874	56875696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56875700_56875900
ES.23452.45	chr4	-	6976	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-2	3983	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTTTGCAACTGGGG	3	True	NA	NA	False	NA	NA	NA	56947426	56875892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.46	chr4	-	6877	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-2	3871	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTTTAAGTCTGAA	-10	True	NA	NA	False	NA	NA	NA	56947439	56876004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.48	chr4	-	6933	17	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-3	3862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.3817528554566	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCTATACTGTTTT	2	True	NA	NA	False	NA	NA	NA	56947427	56876013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904127_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.49	chr4	-	6059	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	3063	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTCTTCATTTCCTTG	0	True	NA	NA	False	NA	NA	NA	56947429	56876812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.5	chr4	-	3832	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	-168	0	-168	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	9261	False	NA	-6	True	AATAAA	-21	NA	56865356	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23452.50	chr4	-	5778	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-3	2771	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGCACATTGGGACTG	-11	True	NA	3	True	NA	NA	NA	56947440	56877104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.51	chr4	-	5563	18	NNC	ENSMUSG00000055296.15	novel	2643	18	NA	NA	-26	2751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.5235036395288	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTTTCGGAACTCAAA	9506	False	NA	-17	True	NA	NA	NA	56937923	56877124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903211_56903248_56903353_56903524_56903666_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861
ES.23452.52	chr4	-	4411	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-2	1405	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTTGTTTTTAAAC	-10	True	NA	NA	False	ATTAAA	-18	NA	56947439	56878470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.53	chr4	-	3957	16	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-4	1080	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	19.1756790405625	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTGCCATCTGACT	1	True	NA	NA	False	NA	NA	NA	56947428	56878795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56946844
ES.23452.54	chr4	-	5192	18	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	1077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.3937710275306	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGCAGTGCCATCTG	0	True	NA	NA	False	NA	NA	NA	56947429	56878798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56880293_56886017_56886213_56888534_56888710_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56907715_56908869_56910156_56910248_56912047_56912131_56914866_56914934_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.55	chr4	-	4027	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-3	1033	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAAATAAATA	2	True	NA	NA	False	NA	NA	NA	56947427	56878842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.56	chr4	-	2826	16	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	-53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.5088583867831	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACCTACTATTAAGTG	0	True	NA	NA	False	NA	NA	NA	56947429	56879928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56936368_56936471_56937861_56937980_56946844
ES.23452.57	chr4	-	5445	2	ISM	ENSMUSG00000055296.15	ENSMUST00000132816.8	1787	12	33946	1870	33946	-1499	internal_fragment	FALSE	canonical	3	70	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAGAGAATGTTGAG	NA	False	NA	NA	False	NA	NA	NA	56889512	56881745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56886213_56888534
ES.23452.58	chr4	-	3272	16	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-4	292	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	9.9389246008923	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGTATTATGTTGTC	1	True	NA	NA	False	AATAAA	-16	NA	56947428	56885323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.59	chr4	-	2975	16	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	6	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	9.9389246008923	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGTGGTTGTGAATTAT	11	True	NA	NA	False	ATTAAA	-30	NA	56947418	56885610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.6	chr4	-	3960	9	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-3130	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	119.942108431526	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	56820786	56810934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56818177_56819632_56820634_56820670
ES.23452.60	chr4	-	2267	1	FSM	ENSMUSG00002075508.1	ENSMUST00020182004.1	133	1	-309	-1825	-309	1825	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTTCATACTGG	NA	False	NA	NA	False	NA	NA	NA	56898066	56895799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_56895800_56898100
ES.23452.61	chr4	-	3490	15	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	2	-10371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4132194793688	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCTTAAAAAGAATTTT	7	True	NA	NA	False	NA	NA	NA	56947422	56895986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56897204_56897360_56897533_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.62	chr4	-	3592	14	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-4	-10397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.4671014477489	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAAAATGA	1	True	NA	NA	False	NA	NA	NA	56947428	56896012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56897533_56899025_56899137_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.63	chr4	-	3280	12	ISM	ENSMUSG00000055296.15	ENSMUST00000155625.2	3576	17	-5	16755	-5	-16755	5prime_fragment	FALSE	canonical	0	0	junction_1	22.2907162975498	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCAGTGTATTAAAGCA	0	True	NA	NA	False	AATAAA	-21	NA	56947429	56902370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56903248_56903353_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.64	chr4	-	3094	10	NNC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	-5	-22550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0390628604752	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGGCTTTTATATTTA	0	True	NA	NA	False	AATAAA	-14	NA	56947429	56908165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56909652_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.65	chr4	-	2052	8	ISM	ENSMUSG00000055296.15	ENSMUST00000155625.2	3576	17	-16	25908	-3	-25908	5prime_fragment	FALSE	canonical	3	49	junction_4	11.0287194660679	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGCCTTTCAGCATGA	-11	True	NA	NA	False	AATAAA	-16	NA	56947440	56911523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ES.23452.7	chr4	-	2368	8	NNC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.60568038114	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATACCGACTGGCTTA	9	True	NA	-8	True	AATAAA	-19	NA	56846067	56810936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56812389_56812510_56812544_56835168_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
ES.23452.8	chr4	-	4574	17	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_10	68.8689595808591	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATACCGACTGGCTTA	-25	True	NA	-8	True	AATAAA	-19	NA	56865196	56810936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56832905_56832993_56835177_56835379_56837731_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ES.23453.1	chr4	+	176	1	Intergenic	novelGene_19255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	56964087	56964263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_56964100_56964300
ES.23454.1	chr4	+	4553	1	Intergenic	novelGene_19256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACACAC	NA	False	NA	NA	False	NA	NA	NA	57011698	57016251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57011700_57016300
ES.23455.1	chr4	-	5190	3	ISM	ENSMUSG00000045589.8	ENSMUST00000053681.6	6817	5	18040	1159	17785	-1159	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTTCTGATCTCTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	56972351	56958331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_56963161_56968061_56968309_56972237
ES.23455.10	chr4	-	3625	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-304	398	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61.2422188935052	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATAAAGTTATTTATT	11	False	NA	NA	False	AATAAA	-43	NA	57143741	56995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.11	chr4	-	3459	24	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-167	388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	63.262498111415	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATACACAGATCTTATAAA	-3	True	NA	NA	False	AATAAA	-33	NA	57143604	56995289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084102_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.12	chr4	-	3546	25	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-226	388	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	62.0543976192573	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATACACAGATCTTATAAA	89	False	NA	NA	False	AATAAA	-33	NA	57143663	56995289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.14	chr4	-	3202	23	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-261	-11947	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	60.4866114548439	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGATGTCTAGGTAAATT	7	True	NA	NA	False	ATTAAA	-15	NA	57143698	57007624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.15	chr4	-	3068	23	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-267	-12078	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	59.5050001371508	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGTGTTTATTGAATA	1	True	NA	NA	False	ATTAAA	-17	NA	57143704	57007755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.16	chr4	-	3062	23	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-225	-12079	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	61.983602203718	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGTGTTTATTGAAT	90	False	NA	NA	False	ATTAAA	-16	NA	57143662	57007756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038465_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.17	chr4	-	3093	23	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-284	-12079	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	60.4866114548439	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGTGTTTATTGAAT	-16	True	NA	NA	False	ATTAAA	-16	NA	57143721	57007756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.18	chr4	-	2919	22	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-226	-12079	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	64.8216111327177	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGTGTTTATTGAAT	89	False	NA	NA	False	ATTAAA	-16	NA	57143663	57007756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041026_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.2	chr4	-	6488	28	Fusion	ENSMUSG00000028434.13_ENSMUSG00000045589.8	novel	771	10	NA	NA	-245	64	multi-exon	TRUE	canonical	0	0	junction_1	67.3949927517688	283	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAGAGAGAGAGAAAG	23	True	NA	NA	False	NA	NA	NA	57143682	56960071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_56963161_56968061_56968309_56972237_56972377_56976916_56977002_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57070308_57070365_57071051_57071083_57073261_57073372_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.20	chr4	-	3608	20	ISM	ENSMUSG00000028434.13	ENSMUST00000095076.10	6746	26	-232	31304	-232	-27598	5prime_fragment	FALSE	canonical	3	30	junction_2	53.6043782062705	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCCATTTTCGTGTG	83	False	NA	NA	False	AATGAA	-22	NA	57143669	57023275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.21	chr4	-	5290	19	NNC	ENSMUSG00000028434.13	novel	771	10	NA	NA	-229	32709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3190165186701	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTTGATGTTATGCA	86	False	NA	NA	False	AATAAA	-21	NA	57143666	57029016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57031931_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.22	chr4	-	3607	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-316	-44	-316	44	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTTTGGGGTGGG	-1	True	NA	44	True	AATAAA	-14	NA	57143753	57061681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.24	chr4	-	2996	16	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	258	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.4408699475838	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCTTTGTTTTTTTTGGG	573	False	NA	39	True	AATAAA	-9	NA	57143179	57061686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076429_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.25	chr4	-	3486	15	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-285	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	53.4598838726149	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTTTACAATGTGTC	-17	True	NA	-2	True	AATAAA	-30	NA	57143722	57061727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077253_57078874_57078996_57084022_57084076_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.26	chr4	-	3641	16	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-272	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.8605346454638	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTAACAGTTTTTAC	-4	True	NA	-10	True	AATAAA	-22	NA	57143709	57061735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073504_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.27	chr4	-	4655	3	ISM	ENSMUSG00000028434.13	ENSMUST00000150665.2	600	4	-793	-1292	-793	-12	intron_retention	FALSE	canonical	3	116	junction_1	16.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGCTAACAGTTTTT	5888	False	NA	-12	True	AATAAA	-20	NA	57071352	57061737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_57063280_57064798_57064864_57068304
ES.23455.28	chr4	-	3632	17	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-314	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.318856183668	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGCTAACAGTTTTT	1	True	NA	-12	True	AATAAA	-20	NA	57143751	57061737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57074179_57074263_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.29	chr4	-	3496	15	NIC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-292	-12	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	38.4240570901266	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGCTAACAGTTTTT	23	False	57143752	-12	True	AATAAA	-20	NA	57143729	57061737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57063280_57064798_57064864_57068304_57068339_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.3	chr4	-	6569	24	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-17	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.9360301734652	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTAAATGCTTCTTCT	298	False	NA	NA	False	AATAAA	-27	NA	57143454	56991976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.30	chr4	-	2833	15	NIC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	312	-13	combination_of_known_junctions	FALSE	canonical	2	11	junction_7	38.1453316479306	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGCTAACAGTTTT	8	True	NA	-13	True	AATAAA	-19	NA	57143125	57061738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.31	chr4	-	3455	17	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-261	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.7088491174822	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGCTAACAGTTTT	7	True	NA	-13	True	AATAAA	-19	NA	57143698	57061738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57062979_57063018_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.32	chr4	-	4093	16	NNC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-261	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3957696544523	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGCTAACAGTTTT	7	True	NA	-13	True	AATAAA	-19	NA	57143698	57061738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57063878_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.37	chr4	-	3333	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-292	206	-292	-206	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTAGTTCTATGAAA	23	False	57143752	NA	False	NA	NA	NA	57143729	57061931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.38	chr4	-	4177	2	ISM	ENSMUSG00000028434.13	ENSMUST00000095076.10	6746	26	73879	69969	1001	-215	internal_fragment	FALSE	canonical	3	149	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTGGCCTTTTTAGT	7682	False	NA	NA	False	NA	NA	NA	57069558	57061940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_57064864_57068304
ES.23455.39	chr4	-	2695	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-219	771	-219	533	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACAGGGAGGCTTGGA	96	False	NA	NA	False	AATAAA	-26	NA	57143656	57062496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.4	chr4	-	6881	25	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-248	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	62.0543976192573	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTAAATGCTTCTTCT	20	True	NA	NA	False	AATAAA	-27	NA	57143685	56991976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.40	chr4	-	2658	15	NIC	ENSMUSG00000028434.13	novel	3247	16	NA	NA	-225	521	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	38.4240570901266	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGGTATTCATCAATACA	90	False	NA	NA	False	AATAAA	-14	NA	57143662	57062508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57063280_57064798_57064864_57068304_57068339_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.41	chr4	-	2324	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-314	1237	-314	67	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTGTGGAATGCATTC	1	True	NA	NA	False	NA	NA	NA	57143751	57062962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.42	chr4	-	1443	9	ISM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	-191	15149	-191	2000	5prime_fragment	FALSE	canonical	3	132	junction_6	10.3652062208139	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTGTGTTGGAAAGT	124	False	NA	NA	False	ATTAAA	-14	NA	57143628	57076874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.5	chr4	-	6896	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-272	-5	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61.2422188935052	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTAAATGCTTCTTCT	-4	True	NA	NA	False	AATAAA	-27	NA	57143709	56991976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.6	chr4	-	4705	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-145	1637	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61.2422188935052	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATACTAATGACTATAAAAG	19	True	NA	NA	False	AATGAA	-16	NA	57143582	56994040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.7	chr4	-	4386	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-314	1149	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	61.2422188935052	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAGCATGAAGTATTT	1	True	NA	NA	False	NA	NA	NA	57143751	56994528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.8	chr4	-	4232	24	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-284	1097	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.9360301734652	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTTGGATTATTCC	-16	True	NA	NA	False	NA	NA	NA	57143721	56994580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_56995804_56999581_56999728_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23455.9	chr4	-	4333	25	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-304	1097	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	62.0543976192573	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTTGGATTATTCC	11	False	NA	NA	False	NA	NA	NA	57143741	56994580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ES.23456.1	chr4	-	1681	1	Intergenic	novelGene_19257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAATAAAGAAAACATTT	NA	False	NA	NA	False	TTTAAA	-23	NA	57165803	57164122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57164100_57165800
ES.23457.1	chr4	+	4413	2	NIC	ENSMUSG00000085967.2	novel	1759	5	NA	NA	-955	-701	intron_retention	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTGTCAGTCATG	NA	False	NA	NA	False	NA	NA	NA	57171115	57175853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57175084_57175408
ES.23458.1	chr4	+	215	1	Intergenic	novelGene_19258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCATCGGAGCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	57189525	57189740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57189500_57189700
ES.23459.1	chr4	+	2497	1	NIC	ENSMUSG00000085654.2	novel	358	2	NA	NA	25	-4688	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAAGTGCTTCTCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	57300120	57302617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57300100_57302600
ES.2346.1	chr10	-	3710	2	Antisense	novelGene_ENSMUSG00000078348.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGATTTTTTTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	12899797	12881502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_12884880_12899464
ES.2346.2	chr10	-	3817	3	Intergenic	novelGene_1792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGGCTTGGCTAGTAA	NA	False	NA	NA	False	NA	NA	NA	12899790	12890845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12894260_12894545_12894627_12899468
ES.2346.3	chr10	-	6149	2	Intergenic	novelGene_1793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGAGGACCGAGTTATA	NA	False	NA	NA	False	NA	NA	NA	12899777	12893484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12896737_12896880
ES.2346.4	chr10	-	1142	3	Intergenic	novelGene_1794	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12899774	12893504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12894260_12894545_12894627_12899468
ES.2346.5	chr10	-	5841	3	Intergenic	novelGene_1795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12899777	12893506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12894260_12894545_12896737_12896880
ES.23460.1	chr4	-	6374	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTCAACATTTT	32	True	NA	0	True	TATAAA	-24	NA	57300763	57190840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
ES.23460.10	chr4	-	4247	27	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	10	-2128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.5681361731366	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTATTTTTAAATAGCT	18	True	NA	-12	True	AATAAA	-18	NA	57300365	57192968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57298408_57298496_57300280
ES.23460.11	chr4	-	4387	28	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	24	-2130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	17.6393530608703	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGTATTTTTAAATAG	-10	True	NA	-14	True	AATAAA	-16	NA	57300351	57192970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57292337_57292424_57293166_57293324_57300280
ES.23460.12	chr4	-	4244	27	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	14	-2130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.5681361731366	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGTATTTTTAAATAG	1448	False	NA	-14	True	AATAAA	-16	NA	57300361	57192970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57271739_57271830_57300280
ES.23460.13	chr4	-	4044	24	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	0	-2130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	13.1264030666028	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGTATTTTTAAATAG	8	True	NA	-14	True	AATAAA	-16	NA	57300375	57192970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57264865_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.14	chr4	-	6939	27	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	21	-2131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.5736938723092	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	-13	True	NA	-15	True	AATAAA	-15	NA	57300354	57192971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57218957_57221751_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.15	chr4	-	4314	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-78	-2131	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	-39	True	NA	-15	True	AATAAA	-15	NA	57300834	57192971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
ES.23460.18	chr4	-	4210	26	FSM	ENSMUSG00000038764.15	ENSMUST00000075637.11	6369	26	28	2131	28	-2131	multi-exon	FALSE	canonical	1	3	junction_25	12.2497999983673	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	0	True	NA	-15	True	AATAAA	-15	NA	57301809	57192971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57301671
ES.23460.19	chr4	-	4469	28	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	28	-2133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	17.6393530608703	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGGTGGTATTTTTAAA	0	True	NA	-17	True	AATAAA	-13	NA	57301809	57192973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57271739_57271830_57300592_57300764_57301671
ES.23460.2	chr4	-	6208	25	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	12.9050350854058	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTCTTGTCTGTCAAC	1448	False	NA	-5	True	TATAAA	-19	NA	57300361	57190845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258024_57264861_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.20	chr4	-	3705	18	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	28	1492	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.4464108262485	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGTATGTAAGACTA	0	True	NA	NA	False	NA	NA	NA	57301809	57216854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57218670_57221897_57222055_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57301671
ES.23460.21	chr4	-	3142	1	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	2019	1453	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57220035	57216893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57216900_57220000
ES.23460.22	chr4	-	1656	12	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-22	6093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.3966831246106	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATATCCTTTGGGTC	-14	True	NA	NA	False	AATAAA	-35	NA	57300397	57238957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270129_57300280
ES.23460.3	chr4	-	6334	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-41	-5	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTCTTGTCTGTCAAC	1393	False	NA	-5	True	TATAAA	-19	NA	57300416	57190845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.4	chr4	-	6415	26	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	12.7030075179069	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTTCTTGTCTGTCA	-14	True	NA	-7	True	TATAAA	-17	NA	57300397	57190847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270280_57300280
ES.23460.5	chr4	-	6356	27	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	22	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.5681361731366	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACACTGTTCTTGTCTG	-12	True	NA	-10	True	TATAAA	-14	NA	57300353	57190850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57271739_57271830_57300280
ES.23460.6	chr4	-	4160	26	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-4	-2128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.6522725231478	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTATTTTTAAATAGCT	4	True	NA	-12	True	AATAAA	-18	NA	57300379	57192968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257988_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.7	chr4	-	4091	25	NNC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	8	-2128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	12.9050350854058	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTATTTTTAAATAGCT	16	True	NA	-12	True	AATAAA	-18	NA	57300367	57192968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258024_57264861_57264909_57264982_57265091_57270022_57270178_57300280
ES.23460.8	chr4	-	4199	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-29	-2128	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTATTTTTAAATAGCT	1405	False	NA	-12	True	AATAAA	-18	NA	57300404	57192968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
ES.23461.1	chr4	-	3078	2	Antisense	novelGene_ENSMUSG00000085654.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGAGGGGTCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	57315108	57306326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_57309206_57314909
ES.23461.2	chr4	-	1160	1	Intergenic	novelGene_19259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTGATTAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57314870	57313710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57313700_57314900
ES.23462.1	chr4	-	5157	3	NNC	ENSMUSG00000087044.2	novel	488	3	NA	NA	-4949	4341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGTGGTGTTTTAATC	NA	False	NA	NA	False	NA	NA	NA	57369241	57356526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57361418_57362074_57362220_57369120
ES.23462.2	chr4	-	1807	3	NNC	ENSMUSG00000087044.2	novel	488	3	NA	NA	1428	606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGACCAAGGACCTTCT	1457	False	NA	NA	False	NA	NA	NA	57362824	57360261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_57361418_57362074_57362220_57362318
ES.23463.1	chr4	-	1279	1	FSM	ENSMUSG00000095042.2	ENSMUST00000119266.2	1002	1	-70	-207	-70	207	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATAACAAACTGAGAAT	NA	False	NA	NA	False	AATAAA	-41	NA	57372024	57370745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57370700_57372000
ES.23464.1	chr4	+	156	1	Intergenic	novelGene_19260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAACCTTTA	NA	False	NA	NA	False	NA	NA	NA	57373581	57373737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57373600_57373700
ES.23465.1	chr4	+	174	1	Intergenic	novelGene_19261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTTTAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	57462988	57463162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57463000_57463200
ES.23466.1	chr4	+	4654	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15406	-2119	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTATGTTATTAT	NA	False	NA	22	True	ATTAAA	-22	NA	57757500	57894863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57757684_57854561_57857038_57892868
ES.23466.10	chr4	+	3417	3	NIC	ENSMUSG00000038729.25	novel	7172	3	NA	NA	-25	-3341	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTTCATGTTGCAGA	-15	True	NA	7	True	TATAAA	-19	NA	57782154	57893641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57782323_57854561_57857038_57892868
ES.23466.12	chr4	+	183	1	Intergenic	novelGene_19265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAGCCTATACTT	NA	False	NA	NA	False	NA	NA	NA	57806279	57806462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57806300_57806500
ES.23466.13	chr4	+	4841	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	12	-2121	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.33999733546453	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTTTATGTTATT	7801	False	NA	20	True	ATTAAA	-20	NA	57821061	57894861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57821255_57854561_57857038_57883023_57883203_57892868
ES.23466.14	chr4	+	3588	5	NNC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	-4577	-3344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.8140512819021	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATATCTCTTCATGTTGC	NA	False	NA	4	True	TATAAA	-16	NA	57840669	57893638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57840716_57842511_57842629_57854561_57857038_57883023_57883203_57892868
ES.23466.15	chr4	+	4006	4	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	-77	-2121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.99382504215469	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTTTATGTTATT	NA	False	NA	20	True	ATTAAA	-20	NA	57845169	57894861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845307_57854561_57857038_57892868_57894151_57894750
ES.23466.16	chr4	+	3385	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-77	3342	-77	-3342	multi-exon	FALSE	canonical	3	18	junction_2	1	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	NA	False	NA	6	True	TATAAA	-18	NA	57845169	57893640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57845307_57854561_57857038_57892868
ES.23466.17	chr4	+	4741	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	-36	2125	-35	-2123	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	NA	False	NA	18	True	ATTAAA	-18	NA	57845211	57894859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
ES.23466.18	chr4	+	7240	2	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	-28	4760	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57845218	57861682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845338_57854561
ES.23466.19	chr4	+	6831	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	-19	18	-18	-16	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTGTATAGTGTTTT	0	True	NA	11	True	ATTAAA	-2	NA	57845228	57896966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
ES.23466.2	chr4	+	3420	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15419	-3340	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTTCATGTTGCAGAT	NA	False	NA	8	True	TATAAA	-20	NA	57757513	57893642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57757684_57854561_57857038_57892868
ES.23466.20	chr4	+	3499	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	-13	3344	-12	-3342	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	6	True	NA	6	True	TATAAA	-18	NA	57845234	57893640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
ES.23466.21	chr4	+	4531	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	-1	2120	-1	-2120	multi-exon	FALSE	canonical	3	18	junction_2	1	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTTATGTTATTA	-7	True	NA	21	True	ATTAAA	-21	NA	57845245	57894862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57845307_57854561_57857038_57892868
ES.23466.22	chr4	+	4550	3	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	2	-2128	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCATTTTTGTTTTTA	-3	True	NA	13	True	ATTAAA	-13	NA	57845249	57894854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845338_57854561_57857038_57892868
ES.23466.23	chr4	+	6657	3	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTGTATAGTGTTTT	-3	True	NA	11	True	ATTAAA	-2	NA	57845249	57896966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845333_57854561_57857038_57892868
ES.23466.24	chr4	+	4937	5	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	3	-2120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.8140512819021	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTTATGTTATTA	-2	True	NA	21	True	ATTAAA	-21	NA	57845250	57894862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845307_57849659_57849892_57854561_57857038_57883023_57883203_57892868
ES.23466.25	chr4	+	3331	3	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	4	-3340	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTTCATGTTGCAGAT	-1	True	NA	8	True	TATAAA	-20	NA	57845251	57893642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845333_57854561_57857038_57892868
ES.23466.27	chr4	+	6829	4	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	9	-16	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.48074069840786	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTGTATAGTGTTTT	4	True	NA	11	True	ATTAAA	-2	NA	57845256	57896966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845333_57854561_57857038_57883023_57883203_57892868
ES.23466.28	chr4	+	4678	4	NNC	ENSMUSG00000038729.25	novel	6830	4	NA	NA	52	-2124	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.48074069840786	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTGTTTTTATGTT	17	False	NA	17	True	ATTAAA	-17	NA	57845299	57894858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57845333_57854561_57857038_57883023_57883203_57892868
ES.23466.29	chr4	+	4430	2	FSM	ENSMUSG00000038729.25	ENSMUST00000102902.4	6993	2	583	1980	583	-1980	multi-exon	FALSE	canonical	3	18	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTATTCACTGATAA	-5	True	NA	NA	False	ATTAAA	-19	NA	57854741	57895002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_57857038_57892868
ES.23466.3	chr4	+	6728	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15452	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTTTTTTTTTCTT	NA	False	NA	28	True	ATTAAA	-19	NA	57757546	57896983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57757684_57854561_57857038_57892868
ES.23466.30	chr4	+	3793	3	NNC	ENSMUSG00000038729.25	novel	6650	3	NA	NA	2754	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAACGTGTATAGTG	2166	False	NA	7	True	NA	NA	NA	57856912	57896962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57857038_57892868_57894544_57894969
ES.23466.31	chr4	+	4296	2	ISM	ENSMUSG00000038729.25	ENSMUST00000098064.9	7172	3	28862	0	28862	0	3prime_fragment	FALSE	canonical	3	16	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTCT	5536	False	NA	27	True	ATTAAA	-18	NA	57883020	57896982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_57883203_57892868
ES.23466.32	chr4	+	2668	2	NNC	ENSMUSG00000038729.25	novel	6993	2	NA	NA	40083	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTGTTTTTCTTTTTTT	72	False	NA	20	True	ATTAAA	-11	NA	57894241	57896975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57896460_57896525
ES.23466.33	chr4	+	2603	2	NNC	ENSMUSG00000038729.25	novel	6993	2	NA	NA	40160	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTCT	149	False	NA	27	True	ATTAAA	-18	NA	57894318	57896982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57896468_57896528
ES.23466.34	chr4	+	1456	2	NNC	ENSMUSG00000038729.25	novel	6993	2	NA	NA	41292	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAACGTGTATAGTG	1281	False	NA	7	True	NA	NA	NA	57895450	57896962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_57896474_57896529
ES.23466.4	chr4	+	180	1	Intergenic	novelGene_19262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57759451	57759631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57759500_57759600
ES.23466.5	chr4	+	1904	2	Intergenic	novelGene_19263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATACCAAGCAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	57771850	57773959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57771867_57772071
ES.23466.6	chr4	+	4648	3	NIC	ENSMUSG00000038729.25	novel	7172	3	NA	NA	-38	-2123	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	974	False	NA	18	True	ATTAAA	-18	NA	57782141	57894859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57782323_57854561_57857038_57892868
ES.23466.7	chr4	+	3607	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	-37	-3342	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.29983164553722	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	975	False	NA	6	True	TATAAA	-18	NA	57782142	57893640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57782323_57854561_57857038_57883023_57883203_57892868
ES.23466.8	chr4	+	6926	4	NIC	ENSMUSG00000038729.25	novel	7211	4	NA	NA	-30	-16	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.29983164553722	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTGTATAGTGTTTT	982	False	NA	11	True	ATTAAA	-2	NA	57782149	57896966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57782323_57854561_57857038_57883023_57883203_57892868
ES.23466.9	chr4	+	6739	3	NIC	ENSMUSG00000038729.25	novel	7172	3	NA	NA	-26	-20	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAACGTGTATAGTG	-16	True	NA	7	True	NA	NA	NA	57782153	57896962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_57782323_57854561_57857038_57892868
ES.23467.1	chr4	-	1929	1	Intergenic	novelGene_19264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAACAAAACACCCC	NA	False	NA	NA	False	NA	NA	NA	57794282	57792353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57792400_57794300
ES.23468.1	chr4	-	3353	1	Intergenic	novelGene_19266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCCAACGTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	57833799	57830446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57830400_57833800
ES.23469.1	chr4	-	7635	2	Intergenic	novelGene_19267	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCCTAACCCAAAACATC	NA	False	NA	NA	False	NA	NA	NA	57883665	57871498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57872964_57877495
ES.2347.1	chr10	+	5535	6	FSM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	-274	-1	-177	1	multi-exon	FALSE	canonical	3	25	junction_3	38.4416440855487	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTCTTTTCATTTAG	2736	False	NA	19	True	AATAAA	-19	NA	12966257	13007439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
ES.2347.10	chr10	+	4718	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	41.2135360719698	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2909	False	NA	18	True	AATAAA	-18	NA	12966430	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.11	chr10	+	5279	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	6	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	50.8434973668196	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGTCTTTTCATTT	2919	False	NA	17	True	AATAAA	-17	NA	12966440	13007437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.12	chr10	+	4644	9	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	49.6133487581719	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2926	False	NA	18	True	AATAAA	-18	NA	12966447	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369_13006389_13006504
ES.2347.13	chr10	+	5210	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_6	50.1046127838767	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2926	False	NA	18	True	AATAAA	-18	NA	12966447	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.14	chr10	+	4654	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	53.864273874248	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTTTCTGTCTTTTCA	2926	False	NA	14	True	AATAAA	-14	NA	12966447	13007434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.15	chr10	+	4505	7	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	50.9727596096407	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2930	False	NA	16	True	AATAAA	-16	NA	12966451	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13004741_13005573
ES.2347.16	chr10	+	5389	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	21	junction_4	43.6870181582075	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2930	False	NA	18	True	AATAAA	-18	NA	12966451	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885
ES.2347.17	chr10	+	4470	10	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	52.1067280791177	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2931	False	NA	16	True	AATAAA	-16	NA	12966452	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005573_13006416_13006532
ES.2347.18	chr10	+	5282	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	50.6125740608124	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2933	False	NA	16	True	AATAAA	-16	NA	12966454	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.19	chr10	+	5172	6	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-1	-3	intron_retention	TRUE	non_canonical	0	0	junction_5	58.8238047052382	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCTGTCTTTTCAT	2933	False	NA	15	True	AATAAA	-15	NA	12966454	13007435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12992453_12992526_13000599_13000913_13002885_13006406_13006521
ES.2347.2	chr10	+	4860	7	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	45.1432903836956	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2781	False	NA	18	True	AATAAA	-18	NA	12966302	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.22	chr10	+	5339	7	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	21	0	intron_retention	FALSE	canonical	2	16	junction_1	48.9741995567281	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2955	False	NA	18	True	AATAAA	-18	NA	12966476	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12967518_12967557_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
ES.2347.23	chr10	+	4747	8	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	46.1700494843546	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2957	False	NA	18	True	AATAAA	-18	NA	12966478	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.25	chr10	+	4740	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	51.7643798418194	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2967	False	NA	16	True	AATAAA	-16	NA	12966488	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989882_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.26	chr10	+	5345	8	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-2	intron_retention	FALSE	canonical	2	16	junction_1	49.8904923255904	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3010	False	NA	16	True	AATAAA	-16	NA	12966531	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12967518_12967557_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885
ES.2347.27	chr10	+	4491	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	6	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	49.4004874800371	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTTTCTGTCTTTTCA	3016	False	NA	14	True	AATAAA	-14	NA	12966537	13007434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13004741_13005369_13006519_13006634
ES.2347.28	chr10	+	5199	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	6	-2	intron_retention	TRUE	non_canonical	0	0	junction_7	50.6125740608124	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3016	False	NA	16	True	AATAAA	-16	NA	12966537	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885_13006439_13006554
ES.2347.29	chr10	+	5331	7	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	11	-4	intron_retention	FALSE	canonical	3	5	junction_2	54.7103484015796	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTTTCTGTCTTTTCA	3021	False	NA	14	True	AATAAA	-14	NA	12966542	13007434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12984566_12984653_12988262_12988295_12992439_12992526_13000599_13000913_13002885
ES.2347.3	chr10	+	5456	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-112	1	intron_retention	FALSE	canonical	3	44	junction_3	31.1704988731332	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTCTTTTCATTTAG	2801	False	NA	19	True	AATAAA	-19	NA	12966322	13007439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
ES.2347.30	chr10	+	5013	5	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	57.5782076831157	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3021	False	NA	16	True	AATAAA	-16	NA	12966542	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_13000599_13000913_13002885_13006445_13006560
ES.2347.34	chr10	+	5280	7	ISM	ENSMUSG00000019817.19	ENSMUST00000121766.8	3897	8	-29	-725	18	0	intron_retention	FALSE	canonical	2	16	junction_1	51.418760087043	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3028	False	NA	18	True	AATAAA	-18	NA	12966549	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_12966769_12967518_12967557_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
ES.2347.35	chr10	+	4012	7	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	18	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	47.7822026374767	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3028	False	NA	16	True	AATAAA	-16	NA	12966549	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006039_13007252
ES.2347.36	chr10	+	5146	8	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	18	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	52.3598225780814	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATCTTTCTGTCTTTTCA	3028	False	NA	14	True	AATAAA	-14	NA	12966549	13007434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12967518_12967557_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.37	chr10	+	5124	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	18	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	50.9727596096407	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3028	False	NA	16	True	AATAAA	-16	NA	12966549	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13006406_13006521
ES.2347.38	chr10	+	5088	6	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_5	59.3005902162871	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3034	False	NA	18	True	AATAAA	-18	NA	12966555	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12992439_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.39	chr10	+	4512	5	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	55.3912222287972	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3038	False	NA	16	True	AATAAA	-16	NA	12966559	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.4	chr10	+	4697	9	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-37	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	50.5196434567783	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	2876	False	NA	16	True	AATAAA	-16	NA	12966397	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369_13006462_13006576
ES.2347.40	chr10	+	5019	5	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-10	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	61.1984476927316	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3044	False	NA	16	True	AATAAA	-16	NA	12966565	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885_13006400_13006515
ES.2347.41	chr10	+	4695	8	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.0435453466124	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3054	False	NA	16	True	AATAAA	-16	NA	12966575	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12981909_12982007_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.42	chr10	+	4520	9	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	50.5196434567783	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369_13006445_13006560
ES.2347.43	chr10	+	5055	3	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	63	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_13000599_13000913_13002885
ES.2347.45	chr10	+	4457	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	-116	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	41.2135360719698	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACTGTATTCCCCAGAA	3054	False	NA	-98	True	NA	NA	NA	12966575	13007322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.46	chr10	+	5208	6	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_3	56.7471585191717	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12967518_12967557_12981598_12981638_12992453_12992526_13000599_13000913_13002885
ES.2347.47	chr10	+	4365	8	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_7	52.9011399900314	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3057	False	NA	16	True	AATAAA	-16	NA	12966578	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006301_13007166
ES.2347.48	chr10	+	5124	4	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	54.485472069779	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	18	True	AATAAA	-18	NA	12966578	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885
ES.2347.49	chr10	+	4967	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_6	47.7822026374767	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	18	True	AATAAA	-18	NA	12966578	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006464_13006695
ES.2347.50	chr10	+	5271	7	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	56.4842652623031	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	18	True	AATAAA	-18	NA	12966578	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12992415_12992526_13000599_13000913_13002885
ES.2347.51	chr10	+	4468	8	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	51.6040656522016	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3057	False	NA	18	True	AATAAA	-18	NA	12966578	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13004741_13005369_13006393_13006508
ES.2347.52	chr10	+	4561	10	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	50.0133315560295	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3059	False	NA	16	True	AATAAA	-16	NA	12966580	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885_13004741_13005369_13006445_13006560
ES.2347.54	chr10	+	3779	7	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.1934552901377	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3060	False	NA	16	True	AATAAA	-16	NA	12966581	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000645_13003399_13004741_13005369
ES.2347.55	chr10	+	4384	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	3	0	intron_retention	TRUE	non_canonical	0	0	junction_6	50.1046127838767	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3060	False	NA	18	True	AATAAA	-18	NA	12966581	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13006127_13006934
ES.2347.56	chr10	+	5191	5	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	59.2890166894341	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3067	False	NA	18	True	AATAAA	-18	NA	12966588	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12989901_12989965_12992439_12992526_13000599_13000913_13002885
ES.2347.57	chr10	+	4404	6	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.5590131951548	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3068	False	NA	16	True	AATAAA	-16	NA	12966589	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12992453_12992526_13000599_13000913_13002885_13004741_13005369_13006532_13006609
ES.2347.59	chr10	+	5149	9	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_8	51.8989402589301	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3088	False	NA	18	True	AATAAA	-18	NA	12966609	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_12967518_12967557_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.6	chr10	+	5268	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-27	0	intron_retention	TRUE	non_canonical	0	0	junction_6	50.9727596096407	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2886	False	NA	18	True	AATAAA	-18	NA	12966407	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13006445_13006560
ES.2347.60	chr10	+	4583	8	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	46.3460805643095	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCTGTCTTTTCAT	3104	False	NA	15	True	AATAAA	-15	NA	12966625	13007435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.61	chr10	+	5040	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	14	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	50.9727596096407	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3110	False	NA	16	True	AATAAA	-16	NA	12966631	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885_13006531_13006648
ES.2347.62	chr10	+	4574	4	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-60	0	intron_retention	FALSE	non_canonical	0	0	junction_1	59.39696961967	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3175	False	NA	18	True	AATAAA	-18	NA	12966696	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12966765_13000843_13000913_13002885_13006406_13006521
ES.2347.63	chr10	+	4941	4	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-30	-2	intron_retention	FALSE	canonical	1	1	junction_2	52.5378170675393	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	3205	False	NA	16	True	AATAAA	-16	NA	12966726	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12981598_12981638_13000599_13000913_13002885
ES.2347.64	chr10	+	5017	5	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-7621	-3	intron_retention	FALSE	canonical	3	44	junction_2	34.8496771864532	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCTGTCTTTTCAT	5265	False	NA	15	True	AATAAA	-15	NA	12981587	13007435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
ES.2347.65	chr10	+	4355	7	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-7611	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	61.6270142785523	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	5275	False	NA	16	True	AATAAA	-16	NA	12981597	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12981638_12988262_12988295_12992415_12992526_13000599_13000913_13002885_13006406_13006636_13006707_13007166
ES.2347.66	chr10	+	4454	7	NNC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-7607	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.9858520560917	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	5279	False	NA	18	True	AATAAA	-18	NA	12981601	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_12981638_12984566_12984644_12988262_12988295_12992453_12992526_13000599_13000913_13002885_13004741_13005369
ES.2347.68	chr10	+	8592	3	ISM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	22268	0	-409	0	3prime_fragment	FALSE	canonical	3	126	junction_2	2.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	NA	False	NA	18	True	AATAAA	-18	NA	12988799	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_12992526_13000599_13000913_13002885
ES.2347.69	chr10	+	5124	4	ISM	ENSMUSG00000019817.19	ENSMUST00000193426.6	1237	8	53545	-4340	584	0	3prime_fragment	FALSE	canonical	3	22	junction_1	50.2460612054982	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	NA	False	NA	18	True	AATAAA	-18	NA	12989792	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_12989965_12992439_12992526_13000599_13000913_13002885
ES.2347.7	chr10	+	5455	7	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	-26	0	intron_retention	FALSE	canonical	3	5	junction_2	52.740717982725	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2887	False	NA	18	True	AATAAA	-18	NA	12966408	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12981598_12981638_12984566_12984653_12988262_12988295_12992453_12992526_13000599_13000913_13002885
ES.2347.70	chr10	+	3248	2	ISM	ENSMUSG00000019817.19	ENSMUST00000130313.2	624	4	11535	-2879	8636	-749	3prime_fragment	FALSE	canonical	3	126	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTGAAGACTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	13000743	13005964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_13000913_13002885
ES.2347.71	chr10	+	4552	1	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	10776	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTTCTGTCTTTTCAT	NA	False	NA	15	True	AATAAA	-15	NA	13002883	13007435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13002900_13007400
ES.2347.73	chr10	+	2055	2	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	12002	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	NA	False	NA	16	True	AATAAA	-16	NA	13004109	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13006058_13007329
ES.2347.74	chr10	+	2347	3	NNC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	12237	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	NA	False	NA	16	True	AATAAA	-16	NA	13004344	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13004741_13005369_13006406_13006521
ES.2347.75	chr10	+	1599	2	NNC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	13154	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTCTTTTCATT	NA	False	NA	16	True	AATAAA	-16	NA	13005261	13007436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13006812_13007387
ES.2347.8	chr10	+	5477	8	NIC	ENSMUSG00000019817.19	novel	3897	8	NA	NA	-19	0	intron_retention	FALSE	canonical	2	16	junction_1	49.7635224161765	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	2894	False	NA	18	True	AATAAA	-18	NA	12966415	13007438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966769_12967518_12967557_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
ES.2347.9	chr10	+	5431	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	22	junction_4	46.4521856919086	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGTCTTTTCATTT	2897	False	NA	17	True	AATAAA	-17	NA	12966418	13007437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
ES.23470.1	chr4	-	3286	2	FSM	ENSMUSG00000052117.6	ENSMUST00000063816.6	2830	2	-473	17	-473	-17	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTTTTGGTCCTAAT	NA	False	NA	NA	False	AATGAA	-30	NA	57916770	57908499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57910612_57915596
ES.23471.1	chr4	+	181	1	Intergenic	novelGene_19268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAAGAATAC	NA	False	NA	NA	False	NA	NA	NA	57919172	57919353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_57919200_57919400
ES.23472.1	chr4	-	727	5	Intergenic	novelGene_19269	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGCATTCTGTCTAA	NA	False	NA	NA	False	NA	NA	NA	57924860	57921427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57921758_57922269_57922388_57923403_57923545_57924516_57924618_57924823
ES.23473.1	chr4	-	171	1	Intergenic	novelGene_19270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAAGAGAAAG	9840	False	NA	NA	False	NA	NA	NA	57933977	57933806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57933800_57934000
ES.23474.1	chr4	-	3061	1	NIC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	9594	-384	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	9618	False	NA	-3	True	AATAAA	-25	NA	57946817	57943756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57943800_57946800
ES.23474.2	chr4	-	708	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	-45	388	-45	-388	multi-exon	FALSE	canonical	3	4612	junction_4	90.890043459116	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCCTGATGTGTTTT	NA	False	NA	-7	True	AATAAA	-21	NA	57956456	57943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ES.23474.3	chr4	-	507	4	NIC	ENSMUSG00000028367.6	novel	1051	5	NA	NA	90	-388	combination_of_known_splicesites	FALSE	canonical	3	163	junction_1	2159.63798406636	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCCTGATGTGTTTT	13	True	NA	-7	True	AATAAA	-21	NA	57956321	57943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_57943968_57950838_57950899_57951796_57951902_57956186
ES.23474.4	chr4	-	3583	4	ISM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	1365	388	1365	-388	3prime_fragment	TRUE	canonical	3	4710	junction_2	73.0722625594388	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCCTGATGTGTTTT	1389	False	NA	-7	True	AATAAA	-21	NA	57955046	57943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796
ES.23475.1	chr4	-	176	1	Intergenic	novelGene_19271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAATTTTTATTTACCA	NA	False	NA	NA	False	NA	NA	NA	57982396	57982220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_57982200_57982400
ES.23476.1	chr4	+	210	1	Intergenic	novelGene_19272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAACTTAGAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	58164234	58164444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_58164200_58164400
ES.23477.1	chr4	-	3461	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	NA	False	NA	-2	True	AATAAA	-25	NA	58553899	58435251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
ES.23477.11	chr4	-	3476	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	119	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	115.15288750179	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTGTGGTTCTGGTCT	NA	False	NA	-6	True	AATAAA	-21	NA	58553779	58435255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553729
ES.23477.13	chr4	-	3540	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-51	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.024584175067	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGATGTGTGGTTCTGGT	-11	True	NA	-8	True	AATAAA	-19	NA	58553235	58435257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58533648_58533769_58553100
ES.23477.14	chr4	-	3421	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	444	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.608795275526	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGATGTGTGGTTCTGG	5801	False	NA	-9	True	AATAAA	-18	NA	58547957	58435258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58547820
ES.23477.15	chr4	-	3696	7	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	120	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.312333346968	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	NA	False	NA	-10	True	AATAAA	-17	NA	58553778	58435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58531010_58531116_58533648_58533769_58543809_58543949_58553729
ES.23477.16	chr4	-	3376	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-125	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	131.440100426012	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	5	True	NA	-10	True	AATAAA	-17	NA	58553753	58435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58547103_58547173_58553729
ES.23477.17	chr4	-	3383	4	NNC	ENSMUSG00000038668.15	novel	3437	4	NA	NA	-99	-5	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_3	104.818361411009	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	31	False	NA	-10	True	AATAAA	-17	NA	58553727	58435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553627
ES.23477.18	chr4	-	3488	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	132.831660382606	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	-4	True	NA	-10	True	AATAAA	-17	NA	58553179	58435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58507219_58507379_58553133
ES.23477.19	chr4	-	3571	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-52	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.529286502955	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGATGTGTGGTTCTG	-12	True	NA	-10	True	AATAAA	-17	NA	58553236	58435259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58552413_58552599_58553133
ES.23477.2	chr4	-	3522	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	5513	3	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_3	114.601725796585	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	2823	False	NA	-2	True	AATAAA	-25	NA	58542888	58435251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58542657
ES.23477.21	chr4	-	3385	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-59	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.089285540757	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCGATGTGTGGTTCT	-19	True	NA	-11	True	AATAAA	-16	NA	58553243	58435260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487218_58504621_58504782_58553133
ES.23477.22	chr4	-	3480	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	5649	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.776470715658	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCGATGTGTGGTTCT	2959	False	NA	-11	True	AATAAA	-16	NA	58542752	58435260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58519139_58519243_58542657
ES.23477.23	chr4	-	3304	3	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	125	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	0	True	NA	-12	True	AATAAA	-15	NA	58553316	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58553133
ES.23477.24	chr4	-	3570	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.793360370606	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	456	False	NA	-12	True	AATAAA	-15	NA	58553302	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58533648_58533769_58553133
ES.23477.25	chr4	-	3598	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.776470715658	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	411	False	NA	-12	True	AATAAA	-15	NA	58553347	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58519139_58519243_58553133
ES.23477.26	chr4	-	3576	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-123	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.276585785799	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	7	True	NA	-12	True	AATAAA	-15	NA	58553751	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58503199_58503473_58504621_58504782_58553729
ES.23477.27	chr4	-	3632	5	NNC	ENSMUSG00000038668.15	novel	3437	4	NA	NA	-89	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.836034540428	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	41	False	NA	-12	True	AATAAA	-15	NA	58553717	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58503199_58503461_58504621_58504782_58553627
ES.23477.28	chr4	-	3614	6	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.680679520731	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	17	True	NA	-12	True	AATAAA	-15	NA	58553207	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58533648_58533769_58543809_58543949_58553133
ES.23477.29	chr4	-	3525	5	NNC	ENSMUSG00000038668.15	novel	3437	4	NA	NA	-104	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	119.871806526806	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	26	False	NA	-12	True	AATAAA	-15	NA	58553732	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553627
ES.23477.3	chr4	-	3588	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	-73	-3	-73	3	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTCTGGTCTGTGC	328	False	NA	-2	True	AATAAA	-25	NA	58553430	58435251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ES.23477.30	chr4	-	3563	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-59	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	120.192293846153	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-19	True	NA	-12	True	AATAAA	-15	NA	58553243	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553100
ES.23477.31	chr4	-	3154	3	NIC	ENSMUSG00000038668.15	novel	3244	3	NA	NA	-134	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	125	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-4	True	NA	-12	True	AATAAA	-15	NA	58553762	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58553729
ES.23477.32	chr4	-	3577	6	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	132	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.680679520731	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-8	True	NA	-12	True	AATAAA	-15	NA	58553766	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58533648_58533769_58543809_58543949_58553729
ES.23477.33	chr4	-	3451	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-50	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	130.913139141952	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	-10	True	NA	-12	True	AATAAA	-15	NA	58553234	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58547103_58547173_58553133
ES.23477.34	chr4	-	3655	7	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-123	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.139833342317	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGATGTGTGGTTC	7	True	NA	-12	True	AATAAA	-15	NA	58553751	58435261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58544525_58544639_58545161_58545262_58553729
ES.23477.35	chr4	-	3484	5	NNC	ENSMUSG00000038668.15	novel	3437	4	NA	NA	-101	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.776470715658	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGGCGATGTGTGGT	29	False	NA	-14	True	AATAAA	-13	NA	58553729	58435263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58519139_58519243_58553627
ES.23477.36	chr4	-	3511	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-32	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.024584175067	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGGCGATGTGTGGT	8	True	NA	-14	True	AATAAA	-13	NA	58553216	58435263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58548366_58548516_58553133
ES.23477.37	chr4	-	3388	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	6338	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.608795275526	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTGGCGATGTGTG	3648	False	NA	-16	True	AATAAA	-11	NA	58542063	58435265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58541952
ES.23477.38	chr4	-	3316	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_3	122.535255697652	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTGGCGATGTGTG	NA	False	NA	-16	True	AATAAA	-11	NA	58553895	58435265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553856
ES.23477.39	chr4	-	2605	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	63	844	17	-844	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACTTTGCCAGTATCA	-1	True	NA	NA	False	NA	NA	NA	58553294	58436098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ES.23477.4	chr4	-	3484	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	127.674064189508	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGGTTCTGGTCTGTG	-1	True	NA	-3	True	AATAAA	-24	NA	58553294	58435252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553100
ES.23477.40	chr4	-	2218	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	151	1143	-22	-1143	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGATATACGACCTG	18	True	NA	NA	False	NA	NA	NA	58553206	58436397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ES.23477.41	chr4	-	2177	4	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	116	-1164	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	79.7927871983984	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58553782	58436418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553729
ES.23477.42	chr4	-	1951	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	-134	1695	62	-1695	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTATGCCTGACAGC	267	False	NA	NA	False	AATACA	-17	NA	58553491	58436949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ES.23477.43	chr4	-	211	1	Intergenic	novelGene_19273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGTGAAATGTAATTC	3481	False	NA	NA	False	NA	NA	NA	58455454	58455243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_58455200_58455500
ES.23477.44	chr4	-	1240	1	FSM	ENSMUSG00000083834.2	ENSMUST00000119701.2	574	1	141	-807	141	807	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCGTGTCTGCTGTCT	NA	False	NA	NA	False	ATTAAA	-32	NA	58483684	58482444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58482400_58483700
ES.23477.45	chr4	-	4150	3	FSM	ENSMUSG00000038668.15_ENSMUSG00000083834.2	ENSMUST00000147354.8	454	3	134	-3830	134	-18	multi-exon	FALSE	canonical	3	105	junction_2	93	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGTTGAAAAGCAGAA	-6	True	NA	NA	False	AAAAAG	-41	NA	58553764	58483269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58487225_58504621_58504782_58553729
ES.23477.5	chr4	-	3589	5	NIC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	17	1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	115.15288750179	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	-1	True	NA	-4	True	AATAAA	-23	NA	58553294	58435253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58437635_58486476_58487225_58504621_58504782_58543809_58543949_58553133
ES.23477.6	chr4	-	3507	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107575.9	3421	4	-85	-1	-10	1	multi-exon	FALSE	canonical	2	30	junction_3	114.601725796585	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	120	False	NA	-4	True	AATAAA	-23	NA	58553638	58435253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553420
ES.23477.8	chr4	-	3592	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	-749	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	130.066329232434	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	NA	False	NA	-4	True	AATAAA	-23	NA	58554647	58435253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553929_58554034_58554448
ES.23477.9	chr4	-	3464	5	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	114	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	136.024584175067	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	NA	False	NA	-4	True	AATAAA	-23	NA	58553784	58435253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58533648_58533769_58553729
ES.23478.1	chr4	-	155	1	Intergenic	novelGene_19274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	58559177	58559022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_58559000_58559200
ES.23479.1	chr4	-	171	1	Intergenic	novelGene_19275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGAGCAAGCGGGCTTG	NA	False	NA	NA	False	NA	NA	NA	58566472	58566301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_58566300_58566500
ES.2348.1	chr10	-	2480	1	FSM	ENSMUSG00002076823.1	ENSMUST00020183396.1	237	1	-337	-1906	-337	1906	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7701	False	NA	NA	False	NA	NA	NA	12967898	12965418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_12965400_12967900
ES.2348.2	chr10	-	4525	7	Intergenic	novelGene_1796	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCTGCCAGGCGAGTG	NA	False	NA	NA	False	NA	NA	NA	13006888	12966600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_12966767_12981596_12981638_12988262_12988295_12992439_12992530_13000603_13000911_13002883_13006391_13006506
ES.2348.3	chr10	-	4644	6	Antisense	novelGene_ENSMUSG00000019817.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCCTCCTACTCTA	NA	False	NA	NA	False	TTTAAA	-21	NA	13006886	12988961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_12989963_12992451_12992530_13000603_13000911_13002883_13004741_13005369_13006391_13006506
ES.23480.1	chr4	+	1850	3	Antisense	novelGene_ENSMUSG00000086470.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACTGTCTACTATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	58639232	58653896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_58639330_58645206_58645368_58652304
ES.23481.1	chr4	+	5692	1	Intergenic	novelGene_19276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58671933	58677625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_58671900_58677600
ES.23482.1	chr4	+	176	1	Intergenic	novelGene_19277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGCTCAAATT	NA	False	NA	NA	False	NA	NA	NA	58882355	58882531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_58882400_58882500
ES.23483.1	chr4	+	1158	1	Antisense	novelGene_ENSMUSG00000050812.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGTGCCAGATCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	58911983	58913141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_58912000_58913100
ES.23484.1	chr4	-	8815	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	9	1675	combination_of_known_junctions	TRUE	canonical	3	17	junction_49	33.7119878645701	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTGCTTTTAGTTTTT	-13	True	NA	-4	True	AATAAA	-23	NA	58912740	58797235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.11	chr4	-	8717	46	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	5	0	intron_retention	FALSE	canonical	3	51	junction_45	26.9915944849412	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAATGTGTGTGTGTCT	7	True	NA	-3	True	AATAAA	-18	NA	58911922	58798910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.12	chr4	-	7226	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-78	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_49	33.7119878645701	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAATGTGTGTGTGTC	2652	False	NA	-4	True	AATAAA	-17	NA	58912827	58798911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.13	chr4	-	7165	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-333	-1	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAATGTGTGTGTGTC	-1	True	NA	-4	True	AATAAA	-17	NA	58912263	58798911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.15	chr4	-	5881	48	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-299	-1119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	38.7219546139693	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-9	True	NA	-12	True	AATAAA	-19	NA	58912229	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833926_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58911868
ES.23484.16	chr4	-	6105	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	-179	1119	-179	-1119	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	2551	False	NA	-12	True	AATAAA	-19	NA	58912928	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.17	chr4	-	6203	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	285	-1119	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	3060	False	NA	-12	True	AATAAA	-19	NA	58912419	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.18	chr4	-	5831	49	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-4	-1119	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	32.7246973396581	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-26	True	NA	-12	True	AATAAA	-19	NA	58912753	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811464_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.2	chr4	-	8779	50	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-13	1668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.0728197948685	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAAGTAGTGCTTTT	10	True	NA	-11	True	AATAAA	-16	NA	58912717	58797242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803760_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58872842_58872940_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.21	chr4	-	6046	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-16	-1119	combination_of_known_junctions	FALSE	canonical	3	17	junction_49	33.7119878645701	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-38	True	NA	-12	True	AATAAA	-19	NA	58912765	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.22	chr4	-	6117	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-299	-1119	combination_of_known_junctions	FALSE	canonical	3	16	junction_49	33.7965099031343	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-9	True	NA	-12	True	AATAAA	-19	NA	58912229	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58911868
ES.23484.23	chr4	-	5797	48	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	7	-1119	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	32.9416675823413	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-15	True	NA	-12	True	AATAAA	-19	NA	58912742	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.24	chr4	-	5919	49	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-14	-1119	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	32.4584603656051	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	9	True	NA	-12	True	AATAAA	-19	NA	58912718	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800345_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.26	chr4	-	6185	50	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-378	-1119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	45.781437559229	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	3171	False	NA	-12	True	AATAAA	-19	NA	58912308	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812709_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832799_58833927_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58911868
ES.23484.27	chr4	-	3873	13	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	2027	-1119	intron_retention	FALSE	canonical	3	160	junction_7	22.4573670169353	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	NA	False	NA	-12	True	AATAAA	-19	NA	58817574	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58814082_58815258_58815325_58817399
ES.23484.28	chr4	-	3070	27	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	1308	-1119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	50.0332581697107	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	8002	False	NA	-12	True	AATAAA	-19	NA	58832756	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824161_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832709
ES.23484.3	chr4	-	8872	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-371	1668	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAAGTAGTGCTTTT	3178	False	NA	-11	True	AATAAA	-16	NA	58912301	58797242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.30	chr4	-	5982	50	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	1	-1119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	40.2213161029641	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	24	True	NA	-12	True	AATAAA	-19	NA	58912703	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834093_58834492_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.32	chr4	-	4463	37	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-18	-1119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.1362491344056	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	5	True	NA	-12	True	AATAAA	-19	NA	58912722	58800029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807818_58822056_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.39	chr4	-	5695	49	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	1	-1127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	34.6769816384811	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAATTTTGCTCCTTA	3	True	NA	-20	True	AATAAA	-11	NA	58911926	58800037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841389_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.43	chr4	-	5930	49	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-29	-1144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.7542250670924	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	2701	False	NA	-37	True	AGTAAA	-34	NA	58912778	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803753_58805535_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833924_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.46	chr4	-	11283	46	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	10	-1144	intron_retention	FALSE	canonical	3	80	junction_45	20.7123747826222	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	-12	True	NA	-37	True	AGTAAA	-34	NA	58912739	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.47	chr4	-	5905	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	8	-1144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	40.5359440548344	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	-14	True	NA	-37	True	AGTAAA	-34	NA	58912741	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.5	chr4	-	8643	49	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-144	1667	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	32.313460387619	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGAAGTAGTGCTTT	3405	False	NA	-12	True	AATAAA	-15	NA	58912074	58797243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803753_58805535_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.50	chr4	-	6335	48	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	22	-1144	intron_retention	FALSE	canonical	3	80	junction_47	24.1515510815951	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	0	True	NA	-37	True	AGTAAA	-34	NA	58912727	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.54	chr4	-	6887	50	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	22	-1144	intron_retention	FALSE	canonical	0	0	junction_5	45.1360662124669	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	0	True	NA	-37	True	AGTAAA	-34	NA	58912727	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807224_58807266_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.58	chr4	-	5937	51	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	139	-1144	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_43	49.0980406941051	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	2914	False	NA	-37	True	AGTAAA	-34	NA	58912565	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58871961_58872098_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58881997_58882082_58885367_58885499_58912475
ES.23484.59	chr4	-	6212	44	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-30694	-1144	intron_retention	FALSE	canonical	3	133	junction_33	20.9276742622548	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAAAAAAGCC	9912	False	NA	-37	True	AGTAAA	-34	NA	58875575	58800054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423
ES.23484.6	chr4	-	8709	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	3	-1667	3	1667	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGAAGTAGTGCTTT	-19	True	NA	-12	True	AATAAA	-15	NA	58912746	58797243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23484.60	chr4	-	5763	44	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	-149	1826	combination_of_known_junctions	FALSE	canonical	3	51	junction_43	23.1357365119004	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAATGTCGTTGGTCTT	3400	False	NA	NA	False	AATAAA	-18	NA	58912079	58808798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.7	chr4	-	8627	50	NNC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	129	1666	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.1403410601457	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTTGAAGTAGTGCTT	2904	False	NA	-13	True	AATAAA	-14	NA	58912575	58797244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811549_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
ES.23484.8	chr4	-	8093	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	1	1264	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTGTCCTTCTTTTTT	3	True	NA	NA	False	AGTAAA	-18	NA	58911926	58797646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
ES.23484.9	chr4	-	7052	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	-4	-3	-4	3	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTGTGTGTGTCTGTG	-26	True	NA	0	True	AATAAA	-21	NA	58912753	58798907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ES.23485.1	chr4	+	7093	6	FSM	ENSMUSG00000038630.9	ENSMUST00000107554.2	2794	6	-31	-4268	-31	4268	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTGCTTTGGGTTTCC	-10	True	NA	NA	False	NA	NA	NA	58943596	58962623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_58943659_58945999_58946530_58948849_58948948_58951827_58951955_58952331_58952443_58956458
ES.23485.2	chr4	+	7298	7	NNC	ENSMUSG00000038630.9	novel	2794	6	NA	NA	-19	4267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCTTGCTTTGGGTTTC	2	True	NA	NA	False	NA	NA	NA	58943608	58962622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_58943659_58943942_58944161_58945999_58946530_58948849_58948948_58951827_58951955_58952331_58952443_58956458
ES.23486.1	chr4	-	176	1	Intergenic	novelGene_19278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	58947646	58947470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_58947500_58947600
ES.23487.1	chr4	+	2557	4	Antisense	novelGene_ENSMUSG00000028378.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	58971479	58981886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_58973690_58975859_58975979_58978013_58978182_58981826
ES.23488.1	chr4	-	3446	10	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	40	-1078	intron_retention	FALSE	canonical	1	1	junction_7	167.910102343891	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGATAGAGAATGAAAT	-2	True	NA	-5	True	AATAAA	-24	NA	58987079	58966516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58966764_58968758_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982195_58982351_58982879_58982926_58984743_58984860_58987037
ES.23488.10	chr4	-	1189	10	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	13	-1084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	135.330140447648	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	-1	True	NA	-11	True	AATAAA	-18	NA	58987106	58966522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987047
ES.23488.2	chr4	-	1236	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	-19	1079	-19	-1079	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTGATAGAGAATGAAA	NA	False	NA	-6	True	AATAAA	-23	NA	58987138	58966517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ES.23488.4	chr4	-	3289	9	NIC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	41	-1079	intron_retention	FALSE	canonical	3	293	junction_8	56.2472221536317	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTGATAGAGAATGAAA	-1	True	NA	-6	True	AATAAA	-23	NA	58987078	58966517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58966764_58968758_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ES.23488.5	chr4	-	1129	9	NIC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	41	-1080	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	137.617903995083	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGTGATAGAGAATGAA	-1	True	NA	-7	True	AATAAA	-22	NA	58987078	58966518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58984743_58984860_58987037
ES.23488.7	chr4	-	3985	8	NIC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	41	-1084	intron_retention	FALSE	canonical	3	293	junction_7	60.626322834295	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	-1	True	NA	-11	True	AATAAA	-18	NA	58987078	58966522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58984860_58987037
ES.23488.8	chr4	-	1150	10	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	41	-1084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.10499004603	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	-1	True	NA	-11	True	AATAAA	-18	NA	58987078	58966522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_58966764_58968758_58968878_58971011_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ES.23489.1	chr4	-	183	1	Intergenic	novelGene_19279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTTCAAAGTA	NA	False	NA	NA	False	NA	NA	NA	59001224	59001041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59001000_59001200
ES.2349.1	chr10	-	2335	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	-34	-4	-34	4	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTTGATGAGATGTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13068946	13053879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.10	chr10	-	4233	10	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	30	-461	intron_retention	FALSE	canonical	3	676	junction_1	35.1097046131791	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGGAATTGGTGTGCTC	NA	False	NA	-23	True	GATAAA	-25	NA	13068882	13054344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.11	chr10	-	1756	11	NNC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	275	-461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	220.652872177092	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGGAATTGGTGTGCTC	NA	False	NA	-23	True	GATAAA	-25	NA	13068637	13054344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068576
ES.2349.13	chr10	-	1732	11	NNC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	4	-500	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	219.769333620503	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTTGGATAAACTAAA	NA	False	NA	-62	True	AATAAA	-17	NA	13068908	13054383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068832
ES.2349.14	chr10	-	5497	5	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	54	-500	intron_retention	FALSE	canonical	3	645	junction_2	56.790734279458	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTTGGATAAACTAAA	NA	False	NA	-62	True	AATAAA	-17	NA	13068858	13054383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13058741_13061167_13061256_13066318_13066490_13067851
ES.2349.16	chr10	-	1640	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	58	599	58	-599	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGGTTCTCCTGTCAGCT	NA	False	NA	-161	True	AATAGA	-19	NA	13068854	13054482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.2	chr10	-	1899	12	NNC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	211.945884251711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGTTTTGATGAGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	13068844	13053883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13054304_13054633_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.3	chr10	-	1879	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	-17	435	-17	-435	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGGTTGTCAGAATTG	NA	False	NA	3	True	NA	NA	NA	13068929	13054318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.4	chr10	-	3192	8	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	19	-459	intron_retention	FALSE	canonical	3	645	junction_4	47.6376630280654	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068893	13054342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.5	chr10	-	2538	10	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	55	-459	intron_retention	FALSE	canonical	3	645	junction_6	44.5606813344192	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068857	13054342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.6	chr10	-	2078	11	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	-361	-459	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	219.769333620503	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068533	13054342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068152
ES.2349.7	chr10	-	4249	6	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	82	-459	intron_retention	FALSE	canonical	3	645	junction_3	53.7907055168456	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068830	13054342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13056762_13058022_13058741_13061167_13061256_13066318_13066490_13067851
ES.2349.8	chr10	-	1818	11	NNC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	26	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	222.27901385421	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGAATTGGTGTGCTCAT	NA	False	NA	-21	True	GATAAA	-27	NA	13068886	13054342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058598_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.2349.9	chr10	-	1549	9	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	95	-460	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	243.133675937744	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGAATTGGTGTGCTCA	NA	False	NA	-22	True	GATAAA	-26	NA	13068817	13054343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13054741_13054866_13055068_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ES.23490.1	chr4	+	1321	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	-27	2729	-27	161	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATGATGGTTCA	-24	True	NA	NA	False	NA	NA	NA	59003144	59022844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ES.23490.2	chr4	+	1350	5	NNC	ENSMUSG00000070972.14	novel	2393	5	NA	NA	-15	301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.0327613011847	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGTGTGAAGTGT	-12	True	NA	5	True	NA	NA	NA	59003156	59022984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59003558_59017669_59017823_59020058_59020252_59020350_59020530_59022560
ES.23490.3	chr4	+	1451	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	-9	2581	-9	309	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAAGTGTTTCTTCTT	-6	True	NA	13	True	TTTAAA	-6	NA	59003162	59022992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ES.23490.4	chr4	+	1537	5	NNC	ENSMUSG00000070972.14	novel	2393	5	NA	NA	3	301	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_3	37.0168880377592	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGTGTGAAGTGT	6	True	NA	5	True	NA	NA	NA	59003174	59022984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59003558_59017669_59017823_59020058_59020530_59021298_59021405_59022560
ES.23491.1	chr4	+	1187	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	1	4	1	-4	multi-exon	FALSE	canonical	3	257	junction_2	16.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTAGTTTGTGTTTGGT	1877	False	NA	31	True	AATAAA	-31	NA	59035088	59041899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59035319_59039226_59039359_59041074
ES.23491.2	chr4	+	1205	4	NNC	ENSMUSG00000038607.13	novel	1192	3	NA	NA	106	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	120.679557322504	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTCCATGACAGCAG	-18	True	NA	16	True	AATAAA	-16	NA	59035193	59041884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59035319_59035755_59035894_59039226_59039359_59041074
ES.23492.1	chr4	-	2910	1	NIC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	50453	-13998	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	59060660	59057750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59057800_59060700
ES.23493.1	chr4	+	159	1	Intergenic	novelGene_19280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAATTATT	NA	False	NA	NA	False	NA	NA	NA	59113588	59113747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59113600_59113700
ES.23494.1	chr4	+	157	1	Intergenic	novelGene_19281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	59115999	59116156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59116000_59116200
ES.23495.1	chr4	-	4978	12	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6723	2417	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.11681719253465	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTCTGTGGTGACTGA	2	True	NA	-4	True	NA	NA	NA	59117836	59078714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
ES.23495.2	chr4	-	4698	4	ISM	ENSMUSG00000038598.10	ENSMUST00000122832.2	2338	10	21143	-43	21143	43	3prime_fragment	FALSE	canonical	3	17	junction_1	0.816496580927726	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGGTCTTCAAATATCT	NA	False	NA	NA	False	AATAAA	-15	NA	59089970	59081088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879
ES.23495.3	chr4	-	2621	12	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6766	17	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.11681719253465	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAATAAACAGAAGAA	NA	False	NA	NA	False	AATAAA	-29	NA	59117879	59081114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
ES.23495.4	chr4	-	2455	11	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6791	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	6.54522726878143	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACCTATTGTAAGAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	59117904	59081126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59109585_59109668_59111092_59111205_59113897_59113978_59117784
ES.23495.5	chr4	-	7626	9	NNC	ENSMUSG00000038598.10	novel	2338	10	NA	NA	6147	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.10633520177595	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTCAAAAATAAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	59104966	59081156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59101748_59101867
ES.23495.6	chr4	-	2838	7	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6766	-10666	intron_retention	FALSE	canonical	3	7	junction_5	6.20259802197613	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCTTCCTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	59117879	59091797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
ES.23495.7	chr4	-	1108	8	NNC	ENSMUSG00000038598.10	novel	4664	28	NA	NA	-6772	-11055	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	5.84842556870249	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	59117885	59092186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092_59111205_59113897_59113978_59117784
ES.23496.1	chr4	+	172	1	Intergenic	novelGene_19282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCTTTTAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59125300	59125472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59125300_59125500
ES.23497.1	chr4	+	238	1	Intergenic	novelGene_19283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAAATACCAAGGATCA	NA	False	NA	NA	False	NA	NA	NA	59125669	59125907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59125700_59125900
ES.23498.1	chr4	+	154	1	Intergenic	novelGene_19284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAACACTGAAAA	NA	False	NA	NA	False	NA	NA	NA	59138302	59138456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59138300_59138500
ES.23499.1	chr4	+	172	1	Intergenic	novelGene_19285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAATGGCTTACTTGC	NA	False	NA	NA	False	NA	NA	NA	59165926	59166098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59165900_59166100
ES.235.1	chr1	-	2550	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	-66	3	-66	-3	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCACTTTCTTATGGTT	NA	False	NA	-1	True	AATAAA	-20	NA	33946963	33891135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ES.235.10	chr1	-	159	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	33924588	33924429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33924400_33924600
ES.235.2	chr1	-	2441	7	NNC	ENSMUSG00000042182.17	novel	2487	7	NA	NA	-159	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	12.1849178176228	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAATGCACTTTCTTA	NA	False	NA	-6	True	AATAAA	-15	NA	33947056	33891140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946843
ES.235.3	chr1	-	2577	8	NNC	ENSMUSG00000042182.17	novel	2487	7	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.9532747966569	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAATGCACTTTCTTA	NA	False	NA	-6	True	AATAAA	-15	NA	33946907	33891140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33924076_33924165_33946646
ES.235.4	chr1	-	2431	8	NNC	ENSMUSG00000042182.17	novel	2487	7	NA	NA	59	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	15.4866631232773	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTAATGCACTTTCT	NA	False	NA	-8	True	AATAAA	-13	NA	33946790	33891142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33892449_33897294_33897356_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ES.235.5	chr1	-	2013	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	58	416	10	-416	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAAAGGTCCCCTGACT	NA	False	NA	NA	False	AATAAA	-24	NA	33946839	33891548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ES.235.6	chr1	-	173	1	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	33895696	33895523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_33895500_33895700
ES.235.7	chr1	-	1429	5	NNC	ENSMUSG00000042182.17	novel	382	3	NA	NA	-9	671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.2921616207205	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGTTCATGTGTAAGC	NA	False	NA	NA	False	AAAACA	-34	NA	33946906	33912167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_33912472_33912513_33912993_33917340_33917519_33922521_33922730_33946646
ES.235.8	chr1	-	911	4	NIC	ENSMUSG00000042182.17	novel	382	3	NA	NA	-5	140	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	17.4610678049451	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATCTGTATACTCCCCT	NA	False	NA	NA	False	AGTAAA	-20	NA	33946877	33912698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_33912993_33917340_33917519_33922521_33922730_33946646
ES.235.9	chr1	-	1131	3	ISM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	1	25713	1	-4007	5prime_fragment	FALSE	canonical	3	39	junction_2	1	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAACAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	33946896	33916845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_33917519_33922521_33922730_33946646
ES.2350.1	chr10	+	2742	2	Antisense	novelGene_ENSMUSG00000062866.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCACCACTGAGACACA	NA	False	NA	NA	False	NA	NA	NA	13256741	13259530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13256878_13256924
ES.23500.1	chr4	-	164	1	Intergenic	novelGene_19286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	59182574	59182410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59182400_59182600
ES.23501.1	chr4	-	268	1	Intergenic	novelGene_19287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	59182970	59182702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59182700_59183000
ES.23502.1	chr4	+	4227	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	-209	-6	-209	6	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGACTGGCTTTGTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	59189047	59222839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ES.23502.10	chr4	+	3782	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-89	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.7606831103769	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACGAGAGTAATGGACTG	-29	True	NA	NA	False	AATAAA	-15	NA	59189468	59222829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211971_59213164_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ES.23502.13	chr4	+	3866	10	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.164399975338	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTAATGGACTGGCTT	21	True	NA	NA	False	AATAAA	-19	NA	59189518	59222833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59217556_59217673_59218494_59218582_59219488_59219679_59220222
ES.23502.14	chr4	+	3604	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-39	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.7837943611729	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCAACGAGAGTAATGG	21	True	NA	NA	False	AATAAA	-11	NA	59189518	59222825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217132_59218549_59218582_59219488_59219679_59220222
ES.23502.15	chr4	+	3745	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-33	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.7837943611729	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAACGAGAGTAATGGAC	27	True	NA	NA	False	AATAAA	-13	NA	59189524	59222827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218487_59218582_59219488_59219679_59220222
ES.23502.16	chr4	+	3589	10	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-32	-103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	82.8462803802289	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAACAATTAAGT	28	True	NA	NA	False	AATAAA	-10	NA	59189525	59222730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222_59221435_59221485
ES.23502.18	chr4	+	242	1	Intergenic	novelGene_19288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTAGGGCCATGCAGTG	223	False	NA	NA	False	NA	NA	NA	59197785	59198027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59197800_59198000
ES.23502.19	chr4	+	4661	6	NIC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-3947	-2	intron_retention	FALSE	canonical	3	208	junction_5	20.9437341465174	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAGTAATGGACTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	59207772	59222831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59207903_59211875_59211979_59213158_59213978_59217035_59217215_59218494_59218582_59219488
ES.23502.2	chr4	+	3959	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	-49	102	-49	-102	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACAATTAAGTG	0	True	NA	NA	False	AATAAA	-11	NA	59189207	59222731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ES.23502.20	chr4	+	2994	6	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	1236	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	106.858036665475	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGGACTGGCTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	59213891	59222837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222_59221191_59221353
ES.23502.21	chr4	+	2797	2	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	30230	6	6831	-6	3prime_fragment	FALSE	canonical	3	306	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAACGAGAGTAATGGAC	5320	False	NA	NA	False	AATAAA	-13	NA	59219486	59222827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59219679_59220222
ES.23502.3	chr4	+	4259	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.7837943611729	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACGAGAGTAATGGACTG	17	False	NA	NA	False	AATAAA	-15	NA	59189224	59222829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218275_59218582_59219488_59219679_59220222
ES.23502.5	chr4	+	1957	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-101	-1791	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	81.1664955508121	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATCTGTGAGGTTTTT	-41	True	NA	NA	False	AATAAA	-22	NA	59189456	59221042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219642_59220249
ES.23502.6	chr4	+	3794	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-101	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	87.8176377500557	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAACGAGAGTAATGGAC	-41	True	NA	NA	False	AATAAA	-13	NA	59189456	59222827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219500_59219679_59220222
ES.23502.7	chr4	+	3653	9	NNC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-92	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	80.5353183392231	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACGAGAGTAATGGACTG	-32	True	NA	NA	False	AATAAA	-15	NA	59189465	59222829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219533_59220222
ES.23502.9	chr4	+	3712	8	NIC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-90	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	89.7424887425922	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAGAGTAATGGACTGGC	-30	True	NA	NA	False	AATAAA	-17	NA	59189467	59222831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59219488_59219679_59220222
ES.23503.1	chr4	+	160	1	Intergenic	novelGene_19289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59249160	59249320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59249200_59249300
ES.23504.1	chr4	+	1502	1	Intergenic	novelGene_19291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTAAAGAACTTGAATAG	NA	False	NA	NA	False	NA	NA	NA	59326864	59328366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59326900_59328400
ES.23505.1	chr4	+	5531	1	Antisense	novelGene_ENSMUSG00000038578.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGCCAGCCTAGGCT	NA	False	NA	NA	False	NA	NA	NA	59386478	59392009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_59386500_59392000
ES.23506.1	chr4	-	3868	18	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	-81	130480	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.461038931808	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTACTAAAATGTAATTA	NA	False	NA	NA	False	AATAAA	-43	NA	59438714	59184202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59184212_59314199_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.10	chr4	-	3981	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	-195	-491	-195	491	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCAAGGTTGTGAGTTT	NA	False	NA	NA	False	AAAACA	-9	NA	59438828	59314191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.11	chr4	-	3549	18	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	250	483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.2941787941127	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTCAACTCCAAGGTT	2	True	NA	NA	False	AAAACA	-1	NA	59438383	59314199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59420842_59420926_59423994_59424151_59427950_59428065_59438205
ES.23506.12	chr4	-	3560	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	284	481	intron_retention	FALSE	canonical	0	0	junction_11	29.4799309112252	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	36	True	NA	NA	False	NA	NA	NA	59438349	59314201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315806_59324867_59324908_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.13	chr4	-	3344	15	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	129	481	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	22.6805679661094	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	160	False	NA	NA	False	NA	NA	NA	59438504	59314201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.14	chr4	-	3571	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	269	481	intron_retention	FALSE	canonical	0	0	junction_12	28.1835275380815	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	21	True	NA	NA	False	NA	NA	NA	59438364	59314201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315806_59324867_59324908_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59423994_59424151_59438205
ES.23506.15	chr4	-	3542	18	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	270	481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.8339676982032	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	22	True	NA	NA	False	NA	NA	NA	59438363	59314201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59331215_59331255_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369638_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.16	chr4	-	3284	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	-19443	481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	38.2040707308549	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	NA	False	NA	NA	False	NA	NA	NA	59458076	59314201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59442236_59442374_59447372_59447575_59458013
ES.23506.17	chr4	-	4013	14	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	280	474	intron_retention	FALSE	canonical	2	4	junction_1	25.3241704596114	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAGACAGCTCAAC	32	True	NA	NA	False	NA	NA	NA	59438353	59314208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.18	chr4	-	3421	17	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	317	474	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	30.1873706001367	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAGACAGCTCAAC	348	False	NA	NA	False	NA	NA	NA	59438316	59314208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59420842_59420926_59423994_59424151_59438205
ES.23506.19	chr4	-	5056	4	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	83	461	intron_retention	FALSE	non_canonical	0	0	junction_3	24.5266295188629	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATTTTAAAAAAA	3210	False	NA	NA	False	NA	NA	NA	59332939	59314221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315806_59324867_59324908_59329462_59331060_59331104
ES.23506.2	chr4	-	4198	3	Antisense	novelGene_ENSMUSG00000028381.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTGATGTGCACCTA	NA	False	NA	NA	False	NA	NA	NA	59221749	59215364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_59217214_59218493_59218580_59219486
ES.23506.20	chr4	-	6387	18	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	278	458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.8186270029854	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATATTTTAAAA	30	True	NA	NA	False	NA	NA	NA	59438355	59314224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59366011_59368924_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.21	chr4	-	3194	15	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	280	449	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	24.054042046515	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	32	True	NA	NA	False	NA	NA	NA	59438353	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59438205
ES.23506.22	chr4	-	2966	13	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	26351	449	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	25.1346374551136	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	59412282	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169
ES.23506.23	chr4	-	3420	18	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	449	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	22.461038931808	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	15	True	NA	NA	False	NA	NA	NA	59438370	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59314590_59314650_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.24	chr4	-	4609	1	Genic_Genomic	ENSMUSG00000038578.16	novel	NA	NA	NA	NA	-2876	449	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	59318842	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_59314200_59318800
ES.23506.25	chr4	-	3362	16	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	272	449	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	22.6293810982291	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	24	True	NA	NA	False	NA	NA	NA	59438361	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.26	chr4	-	2908	13	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	449	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	30.4808683165905	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	15	True	NA	NA	False	NA	NA	NA	59438370	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59438205
ES.23506.27	chr4	-	3064	14	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	449	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	28.2096965997247	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	15	True	NA	NA	False	NA	NA	NA	59438370	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.28	chr4	-	3400	16	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	230	449	combination_of_known_splicesites	FALSE	canonical	3	11	junction_15	21.7220829776725	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	-18	True	NA	NA	False	NA	NA	NA	59438403	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.29	chr4	-	3077	13	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	449	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	31.0656786323571	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	15	True	NA	NA	False	NA	NA	NA	59438370	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59438205
ES.23506.3	chr4	-	5105	2	Antisense	novelGene_ENSMUSG00000028381.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTGATGTGCACCTA	NA	False	NA	NA	False	NA	NA	NA	59221749	59215364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_59217214_59218493
ES.23506.30	chr4	-	3033	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	282	449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.3670545562125	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	34	True	NA	NA	False	NA	NA	NA	59438351	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390762_59424099_59424151_59427950_59428065_59438205
ES.23506.31	chr4	-	4083	16	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	285	449	intron_retention	FALSE	canonical	1	3	junction_14	31.3195714459115	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	37	True	NA	NA	False	NA	NA	NA	59438348	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369638_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59412323_59420842_59420926_59423994_59424151_59438205
ES.23506.32	chr4	-	3250	16	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	212	449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.7872091676301	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	-36	True	NA	NA	False	NA	NA	NA	59438421	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59420842_59420926_59423994_59424151_59427950_59428065_59438205
ES.23506.33	chr4	-	3207	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	279	449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.6489666681622	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	31	True	NA	NA	False	NA	NA	NA	59438354	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59329462_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.34	chr4	-	2882	11	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	72	449	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	35.5128145885397	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	103	False	NA	NA	False	NA	NA	NA	59438561	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59423994_59424151_59438205
ES.23506.35	chr4	-	2143	8	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	230	449	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	25.6347977784662	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAATAAAAAAAT	-18	True	NA	NA	False	NA	NA	NA	59438403	59314233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59438205
ES.23506.36	chr4	-	3354	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	270	-329	270	329	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTTTATATGCCCCAG	22	True	NA	NA	False	NA	NA	NA	59438363	59314353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.37	chr4	-	2618	14	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	284	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.9523689085518	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTGGGTTTTGTGGT	36	True	NA	NA	False	TATAAA	-21	NA	59438349	59314682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.38	chr4	-	2901	16	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	280	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_15	21.7220829776725	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTGGGTTTTGTGGT	32	True	NA	NA	False	TATAAA	-21	NA	59438353	59314682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.39	chr4	-	2655	14	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	219	-4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	28.2096965997247	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCTATTTGGGTTTTG	-29	True	NA	NA	False	TATAAA	-17	NA	59438414	59314686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.4	chr4	-	6385	1	Antisense	novelGene_ENSMUSG00000028381.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTGATGTGCACCTA	NA	False	NA	NA	False	NA	NA	NA	59221749	59215364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_59215400_59221700
ES.23506.40	chr4	-	3793	13	NNC	ENSMUSG00000038578.16	novel	1433	4	NA	NA	249	-5513	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	34.1609751357045	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCATCTATCGCCTC	1	True	NA	NA	False	AATAAA	-26	NA	59438384	59320266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59322252_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.41	chr4	-	4227	14	NNC	ENSMUSG00000038578.16	novel	1433	4	NA	NA	-39	-5514	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	30.4716377974531	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCTGCATCTATCGCCT	-8	True	NA	NA	False	AATAAA	-25	NA	59438672	59320267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59322252_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59438205
ES.23506.42	chr4	-	4045	16	NNC	ENSMUSG00000038578.16	novel	1433	4	NA	NA	350	-5515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.5811963613378	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCTGCATCTATCGCC	381	False	NA	NA	False	AATAAA	-24	NA	59438283	59320268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59322252_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412231_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.43	chr4	-	2085	12	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	22.7469006153213	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATGATTTGCATT	15	True	NA	NA	False	NA	NA	NA	59438370	59329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59423994_59424151_59427950_59428065_59438205
ES.23506.44	chr4	-	1420	7	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	263	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.5486737865487	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATGATTTGCATT	15	True	NA	NA	False	NA	NA	NA	59438370	59329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59390572_59390753_59438205
ES.23506.45	chr4	-	2010	13	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	282	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.6997104582799	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATGATTTGCATT	34	True	NA	NA	False	NA	NA	NA	59438351	59329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390658_59390743_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.46	chr4	-	2404	14	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	277	14533	277	-6	5prime_fragment	FALSE	canonical	3	63	junction_6	11.6248051456597	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATGATTTGCATT	29	True	NA	NA	False	NA	NA	NA	59438356	59329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.47	chr4	-	2439	15	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	281	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.7314510859034	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAATGATTTGCATT	33	True	NA	NA	False	NA	NA	NA	59438352	59329215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59329722_59331215_59331255_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.48	chr4	-	2229	13	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	271	-11	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	27.9566877310043	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAACAAATGATTT	23	True	NA	NA	False	NA	NA	NA	59438362	59329220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59329660_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.49	chr4	-	5780	11	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	291	-32560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.0842487125583	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTCTCTTGGATTTTTT	322	False	NA	NA	False	ATTAAA	-16	NA	59438342	59364516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59368924_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423014_59423073_59423994_59424151_59427950_59428065_59438205
ES.23506.5	chr4	-	673	1	Antisense	novelGene_ENSMUSG00000028381.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59221749	59221076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_59221100_59221700
ES.23506.50	chr4	-	1933	10	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	27	50878	27	-33604	5prime_fragment	FALSE	canonical	3	63	junction_2	13.2664991614216	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCAGTCCTTCTGTACA	58	False	NA	NA	False	AATAAA	-40	NA	59438606	59365560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.51	chr4	-	1597	9	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	243	-33614	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	28.1599782492814	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTTACCAATCAGTC	-5	True	NA	NA	False	AATAAA	-30	NA	59438390	59365570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59365915_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.52	chr4	-	3177	9	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	271	-35845	intron_retention	FALSE	canonical	3	8	junction_1	23.8104493867713	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTATGAATTTTTACAT	23	True	NA	NA	False	AATAAA	-16	NA	59438362	59367801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59368924_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.53	chr4	-	2679	10	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	48	-35846	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	26.2429296768614	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATACTATGAATTTTTACA	79	False	NA	NA	False	AATAAA	-15	NA	59438585	59367802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59368924_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.54	chr4	-	1527	9	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	231	54696	231	-37422	5prime_fragment	FALSE	canonical	3	63	junction_1	13.0551713891469	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGTGACTCTGCTTCT	-17	True	NA	NA	False	ATTAAA	-14	NA	59438402	59369378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.55	chr4	-	5007	1	Intergenic	novelGene_19292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCCTGAGGTAAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	59388210	59383203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59383200_59388200
ES.23506.56	chr4	-	4482	6	ISM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	314	72305	314	-55031	5prime_fragment	FALSE	canonical	3	74	junction_4	13.8506317545446	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAGTGTGTGACTTAC	345	False	NA	NA	False	TATAAA	-27	NA	59438319	59386987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.57	chr4	-	3292	6	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	200	-56302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.9778311965426	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTGAGTTAGTGGCTC	231	False	NA	NA	False	TTTAAA	-18	NA	59438433	59388258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59390753_59411302_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.58	chr4	-	1602	5	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	230	-57881	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	36.8272996566406	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTTTTGTGTGTGTGTG	-18	True	NA	NA	False	NA	NA	NA	59438403	59389837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.59	chr4	-	1193	5	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	280	-58240	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	36.8272996566406	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCGGTTTGTTTTCATT	32	True	NA	NA	False	GATAAA	-32	NA	59438353	59390196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
ES.23506.6	chr4	-	124	1	Antisense	novelGene_ENSMUSG00000028381.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAAGG	NA	False	NA	NA	False	AATACA	-31	NA	59221749	59221625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_59221600_59221700
ES.23506.7	chr4	-	182	1	Intergenic	novelGene_19290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	59279196	59279014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59279000_59279200
ES.23506.8	chr4	-	3739	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	265	-709	265	709	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTCTTGGTGAAATT	17	True	NA	NA	False	TATAAA	-15	NA	59438368	59313973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23506.9	chr4	-	3367	17	NNC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	291	496	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	31.7646988613146	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGTGAGTTTTCTCT	322	False	NA	NA	False	AAAACA	-14	NA	59438342	59314186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329660_59331215_59331255_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ES.23507.1	chr4	+	1840	1	Intergenic	novelGene_19293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	59506720	59508560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59506700_59508600
ES.23508.1	chr4	+	181	1	Intergenic	novelGene_19294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGTCCTTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59536732	59536913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59536700_59536900
ES.23509.1	chr4	-	6952	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	-93	-4	-93	4	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTTCTTGTCTGTA	NA	False	NA	0	True	AATAAA	-30	NA	59549457	59471863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.11	chr4	-	6969	6	FSM	ENSMUSG00000028382.16	ENSMUST00000173268.8	669	6	-1402	-4898	-1402	11	multi-exon	FALSE	canonical	3	119	junction_2	24.8965861113527	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGTGCATGGTTAAT	NA	False	NA	-5	True	ATTAAA	-16	NA	59487174	59472036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606
ES.23509.15	chr4	-	6631	14	FSM	ENSMUSG00000028382.16	ENSMUST00000148331.9	2016	14	-6	-4609	-6	9	multi-exon	FALSE	canonical	3	25	junction_12	40.1538461538462	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGTAGTGCATGGTTA	-1	True	NA	-7	True	ATTAAA	-14	NA	59549320	59472038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59549147
ES.23509.16	chr4	-	6647	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	1	-8	1	8	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTAGTGCATGGTT	-5	True	NA	-8	True	ATTAAA	-13	NA	59549294	59472039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
ES.23509.17	chr4	-	5256	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	76	1523	-4	-1343	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTATCGTGCTAAAACAA	1	True	NA	NA	False	AATAAA	-20	NA	59549288	59473390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.18	chr4	-	3557	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	-28	3326	-28	65	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTGTCCACCCCTTC	NA	False	NA	2	True	AATACA	-17	NA	59549392	59475193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.2	chr4	-	6763	14	FSM	ENSMUSG00000028382.16	ENSMUST00000148331.9	2016	14	33	-4780	3	0	multi-exon	FALSE	canonical	3	25	junction_12	40.1538461538462	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTCTGTGTTCTTGTC	8	True	NA	-4	True	AATAAA	-26	NA	59549281	59471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59549147
ES.23509.20	chr4	-	3494	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	-3	3149	-3	62	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAATTTTGTCCACCCC	-9	True	NA	-1	True	AATACA	-14	NA	59549298	59475196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
ES.23509.21	chr4	-	5807	13	NIC	ENSMUSG00000028382.16	novel	6855	14	NA	NA	3	62	intron_retention	FALSE	canonical	3	119	junction_2	21.0455854436665	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAATTTTGTCCACCCC	8	True	NA	-1	True	AATACA	-14	NA	59549281	59475196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.22	chr4	-	3377	14	FSM	ENSMUSG00000028382.16	ENSMUST00000148331.9	2016	14	28	-1389	-2	0	multi-exon	FALSE	canonical	3	25	junction_12	40.1538461538462	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTAATTATTTC	3	True	NA	-18	True	NA	NA	NA	59549286	59475258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59549147
ES.23509.23	chr4	-	3220	13	NIC	ENSMUSG00000028382.16	novel	6855	14	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	46.3707882184463	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTTTTGTTAATTAT	1	True	NA	-21	True	NA	NA	NA	59549288	59475261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.24	chr4	-	3405	15	FSM	ENSMUSG00000028382.16	ENSMUST00000102883.11	3409	15	-1	5	-1	-5	multi-exon	FALSE	canonical	3	25	junction_12	53.5489953029857	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGCTTTTGTTAATT	4	True	NA	-23	True	NA	NA	NA	59549285	59475263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59546148_59546183_59549147
ES.23509.25	chr4	-	3345	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	79	3431	-1	-40	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGATTGTGTCATGTAA	4	True	NA	-58	True	AAAAAG	-18	NA	59549285	59475298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.26	chr4	-	365	1	Genic_Genomic	ENSMUSG00000028382.16	novel	NA	NA	NA	NA	-24	-30962	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACAGTCACCTTTTCC	520	False	NA	NA	False	ACTAAA	-38	NA	59548799	59548434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_59548400_59548800
ES.23509.3	chr4	-	6859	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	-41	-178	-22	-2	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTCTGTGTTCTTG	NA	False	NA	-6	True	AATAAA	-24	NA	59549336	59471869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
ES.23509.4	chr4	-	6806	14	NIC	ENSMUSG00000028382.16	novel	6855	14	NA	NA	-22	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	43.4910043068828	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAAGGTTTTTCTGTGTT	NA	False	NA	-10	True	AATAAA	-20	NA	59549336	59471873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485732_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.5	chr4	-	6595	13	NIC	ENSMUSG00000028382.16	novel	6855	14	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	46.3707882184463	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTAAGGTTTTTCTGT	11	True	NA	-13	True	AATAAA	-17	NA	59549278	59471876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.23509.6	chr4	-	6798	15	FSM	ENSMUSG00000028382.16	ENSMUST00000102883.11	3409	15	-9	-3380	2	-11	multi-exon	FALSE	canonical	3	25	junction_12	53.5489953029857	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCTTAAGGTTTTTCT	-4	True	NA	-15	True	AATAAA	-15	NA	59549293	59471878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59546148_59546183_59549147
ES.23509.8	chr4	-	6867	15	NIC	ENSMUSG00000028382.16	novel	6640	15	NA	NA	-4	-11	intron_retention	FALSE	canonical	1	1	junction_6	54.4699879918909	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCTTAAGGTTTTTCT	NA	False	NA	-15	True	AATAAA	-15	NA	59549368	59471878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485732_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
ES.23509.9	chr4	-	6711	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	-20	164	-20	16	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCATGGTTAATTCAAG	NA	False	NA	0	True	ATTAAA	-21	NA	59549384	59472031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ES.2351.1	chr10	+	3138	5	Antisense	novelGene_ENSMUSG00000062866.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCTATGGCATTTTTA	NA	False	NA	NA	False	NA	NA	NA	13319542	13340536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13320836_13322272_13322348_13327981_13328119_13336167_13336271_13339006
ES.23510.1	chr4	+	177	1	Intergenic	novelGene_19295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAATGCTA	NA	False	NA	NA	False	NA	NA	NA	59570748	59570925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59570700_59570900
ES.23511.1	chr4	+	2629	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	-14	-4	-14	4	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTTATTTCTTTT	0	True	NA	24	True	NA	NA	NA	59581548	59618693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.2	chr4	+	1983	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	2	626	2	-625	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTCTTATGTAAAATG	2	True	NA	4	True	AATAAA	-14	NA	59581564	59618063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.3	chr4	+	2736	12	NNC	ENSMUSG00000028383.18	novel	2626	12	NA	NA	21	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.6270334921355	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTTATTTCTTTT	21	False	NA	24	True	NA	NA	NA	59581583	59618693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59581776_59592158_59592319_59593236_59593336_59594395_59594511_59595173_59595320_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.4	chr4	+	1843	10	NIC	ENSMUSG00000028383.18	novel	2611	11	NA	NA	-40	-626	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	31.0033849207342	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTTCTTATGTAAAAT	10	False	NA	3	True	AATAAA	-13	NA	59581604	59618062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59581776_59592154_59592319_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.5	chr4	+	1840	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	43	728	-39	-727	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTCCTCTCTATGCCT	11	False	NA	-98	True	AATATA	-14	NA	59581605	59617961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.6	chr4	+	3858	9	NIC	ENSMUSG00000028383.18	novel	2611	11	NA	NA	23	-625	intron_retention	FALSE	canonical	3	75	junction_6	12.6984250992003	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTCTTATGTAAAATG	44	False	NA	4	True	AATAAA	-14	NA	59581667	59618063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59581776_59592154_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ES.23511.7	chr4	+	165	1	Intergenic	novelGene_19296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATCTTTTTTAAAAACT	1448	False	NA	NA	False	NA	NA	NA	59583174	59583339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59583200_59583300
ES.23512.1	chr4	-	172	1	Intergenic	novelGene_19297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAAAAGACCTAGGA	NA	False	NA	NA	False	NA	NA	NA	59620016	59619844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59619800_59620000
ES.23513.1	chr4	+	6038	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	-26	4844	-26	3556	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTTTTGCATTAATTC	7897	False	NA	NA	False	CATAAA	-30	NA	59626184	59756595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ES.23513.10	chr4	+	10851	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	5	0	5	0	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTATGTCTGTTTTCTT	-6	True	NA	NA	False	NA	NA	NA	59626215	59761439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ES.23513.11	chr4	+	6727	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	11	4118	11	-4118	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGATGTCCCTTGTGTTTG	0	True	NA	NA	False	AAGAAA	-28	NA	59626221	59757321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ES.23513.12	chr4	+	3812	5	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	16	1255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.9534631898291	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGCACAAGTCTTTA	5	True	NA	8	True	ATTAAA	-15	NA	59626226	59754294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59733257_59733375_59737561_59737735_59752232
ES.23513.13	chr4	+	2571	7	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-12	18667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.4876524387374	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTCTTTCCGTTACT	9	True	NA	NA	False	NA	NA	NA	59626230	59780106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59737561_59737735_59766296_59766345_59769253_59769385_59779246_59779524_59779620
ES.23513.14	chr4	+	3222	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-12	-5	-12	5	multi-exon	FALSE	canonical	2	5	junction_2	48.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTACTGTGGTGCTT	9	True	NA	NA	False	AATAAA	-16	NA	59626230	59721406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59719640
ES.23513.15	chr4	+	2498	3	NIC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-6	1263	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	15	True	NA	16	True	ATTAAA	-23	NA	59626236	59754302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59626492_59737561_59737735_59752232
ES.23513.16	chr4	+	5793	3	NIC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	3	3545	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	48.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATTCTATTACCTTT	24	True	NA	NA	False	CATAAA	-19	NA	59626245	59756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59626492_59690143_59691339_59752232
ES.23513.17	chr4	+	3763	5	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	8	1262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.2674371464484	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAAGTCTTTAAATTAGT	29	True	NA	15	True	ATTAAA	-22	NA	59626250	59754301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59675038_59675124_59690143_59691339_59737561_59737735_59752232
ES.23513.18	chr4	+	4399	3	NNC	ENSMUSG00000045071.15	novel	3205	3	NA	NA	13	-2193	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	48	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAAGAGTCCTGAGTTG	34	False	NA	NA	False	AATAAA	-19	NA	59626255	59718050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59715082
ES.23513.19	chr4	+	3937	4	NNC	ENSMUSG00000045071.15	novel	748	2	NA	NA	-4357	1255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4302481094059	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGCACAAGTCTTTA	NA	False	NA	8	True	ATTAAA	-15	NA	59686831	59754294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59687339_59690143_59691339_59737561_59737735_59752232
ES.23513.2	chr4	+	5177	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	-47	-1925	-15	1925	multi-exon	FALSE	canonical	2	5	junction_2	48.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTCCCTGTTAATTCA	-26	True	NA	NA	False	ATTAAA	-27	NA	59626195	59723326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59719640
ES.23513.20	chr4	+	4055	1	Intergenic	novelGene_19299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTCCAGTGAGCGCC	NA	False	NA	NA	False	AATAAA	-20	NA	59725304	59729359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59725300_59729400
ES.23513.21	chr4	+	4846	2	ISM	ENSMUSG00000045071.15	ENSMUST00000221633.2	1097	3	1693	-1255	1693	1255	3prime_fragment	FALSE	canonical	3	66	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGCACAAGTCTTTA	6902	False	NA	8	True	ATTAAA	-15	NA	59734950	59754294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59737735_59752232
ES.23513.22	chr4	+	391	1	ISM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	130865	3973	23818	-3973	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAGTAAAACATA	NA	False	NA	NA	False	NA	NA	NA	59757075	59757466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59757100_59757500
ES.23513.23	chr4	+	6012	1	Antisense	novelGene_ENSMUSG00000038544.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATCTGGCCATACT	NA	False	NA	NA	False	NA	NA	NA	59775386	59781398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_59775400_59781400
ES.23513.24	chr4	+	5394	3	Antisense	novelGene_ENSMUSG00000038544.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGGCCATACTTGTAA	NA	False	NA	NA	False	NA	NA	NA	59775386	59781403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_59776153_59776229_59778062_59778607
ES.23513.3	chr4	+	2760	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	-14	8110	-14	290	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTAGTTACTTAA	-25	True	NA	NA	False	NA	NA	NA	59626196	59753329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ES.23513.4	chr4	+	2558	3	NIC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-14	261	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	48.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAGAAAAAG	-25	True	NA	NA	False	AAGAAA	-40	NA	59626196	59753300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_59626492_59690143_59691339_59752232
ES.23513.5	chr4	+	3735	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	-14	7135	-14	1265	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTCTTTAAATTAGTTAT	-25	True	NA	18	True	ATTAAA	-25	NA	59626196	59754304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ES.23513.6	chr4	+	3712	4	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-11	1255	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	38.1313519298752	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGCACAAGTCTTTA	-22	True	NA	8	True	ATTAAA	-15	NA	59626199	59754294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59737561_59737735_59752242
ES.23513.7	chr4	+	3618	5	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	-2	1258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	36.7040529097265	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCACAAGTCTTTAAAT	-13	True	NA	11	True	ATTAAA	-18	NA	59626208	59754297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232_59754159_59754256
ES.23513.8	chr4	+	2736	4	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	0	290	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	38.1313519298752	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTAGTTACTTAA	-11	True	NA	NA	False	NA	NA	NA	59626210	59753329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59737561_59737735_59752242
ES.23513.9	chr4	+	2862	5	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	1	290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.9534631898291	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGAGTAGTTACTTAA	-10	True	NA	NA	False	NA	NA	NA	59626211	59753329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59626492_59690143_59691339_59733257_59733375_59737561_59737735_59752232
ES.23514.1	chr4	-	205	1	Intergenic	novelGene_19298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACAACAAAAACCCAAC	NA	False	NA	NA	False	NA	NA	NA	59654400	59654195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59654200_59654400
ES.23515.1	chr4	-	7375	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	55	-4193	-3	4193	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGTTTAATGTCGC	27	True	NA	NA	False	AATATA	-23	NA	59783811	59765443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.10	chr4	-	4654	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	236	junction_3	37.1064534668687	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-5	True	NA	NA	False	NA	NA	NA	59783843	59769636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59772460_59773915_59775550_59782253_59782335_59783727
ES.23515.11	chr4	-	3094	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-4	-28	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	117.729445009404	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAACAAACAAAA	-4	True	NA	NA	False	NA	NA	NA	59783842	59769664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59772460_59775446_59775550_59782253_59782335_59783727
ES.23515.12	chr4	-	3239	5	NNC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-4	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.314118264982	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAACAAACAAAA	-4	True	NA	NA	False	NA	NA	NA	59783842	59769664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59772460_59773915_59774061_59775446_59775550_59782253_59782335_59783727
ES.23515.13	chr4	-	4514	3	NIC	ENSMUSG00000038544.15	novel	1438	4	NA	NA	-4	-28	intron_retention	FALSE	canonical	3	138	junction_2	94	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAACAAACAAAA	26	True	NA	NA	False	NA	NA	NA	59783812	59769664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59772460_59773915_59775550_59783727
ES.23515.14	chr4	-	1503	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-65	0	-7	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTTGTAAGGATCCT	-35	True	NA	-6	True	ATTAAA	-18	NA	59783873	59771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ES.23515.15	chr4	-	1596	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	-19	1660	-19	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTTGTAAGGATCCT	NA	False	NA	-6	True	ATTAAA	-18	NA	59783885	59771296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.16	chr4	-	2992	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	236	junction_3	37.1064534668687	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACTTTGTAAGGATCC	-4	True	NA	-7	True	ATTAAA	-17	NA	59783842	59771297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59772460_59773915_59775550_59782253_59782335_59783727
ES.23515.17	chr4	-	8245	4	NIC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	7	-1	intron_retention	FALSE	canonical	3	236	junction_3	45.7990781081405	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACTTTGTAAGGATCC	7	True	NA	-7	True	ATTAAA	-17	NA	59783831	59771297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_59772460_59773915_59774007_59775446_59782335_59783727
ES.23515.18	chr4	-	1180	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	26	2031	-2	-371	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATGTGACTAAATACTG	-2	True	NA	NA	False	AATAAA	-21	NA	59783840	59771667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.19	chr4	-	1593	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	-22	23	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGATGAGAGTCTC	NA	False	NA	NA	False	AATAAA	-43	NA	59783888	59774064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
ES.23515.2	chr4	-	4147	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	25	-935	-3	935	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATGGAGAGGGAACGCT	-3	True	NA	NA	False	AATAAA	-21	NA	59783841	59768701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.20	chr4	-	1531	2	ISM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	6	2797	6	-6	5prime_fragment	FALSE	canonical	3	138	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCCCCTTATATAAT	36	True	NA	NA	False	AATAAA	-14	NA	59783802	59774093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_59775550_59783727
ES.23515.21	chr4	-	1671	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-23	6	5	-6	multi-exon	FALSE	canonical	3	236	junction_2	17	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCCCCTTATATAAT	-23	True	NA	NA	False	AATAAA	-14	NA	59783861	59774093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59775550_59782253_59782335_59783727
ES.23515.22	chr4	-	1533	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-22	143	6	-143	multi-exon	FALSE	canonical	3	236	junction_2	17	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATTGGTTATTCAGTTT	-22	True	NA	-4	True	NA	NA	NA	59783860	59774230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59775550_59782253_59782335_59783727
ES.23515.23	chr4	-	449	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	-5	1210	-5	-1210	multi-exon	FALSE	canonical	3	236	junction_2	17	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGGCTGCTGTTGTCTG	-5	True	NA	NA	False	NA	NA	NA	59783843	59775297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59775550_59782253_59782335_59783727
ES.23515.3	chr4	-	4062	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-31	-2593	-1	933	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGATGGAGAGGGAACG	-1	True	NA	NA	False	AATAAA	-19	NA	59783839	59768703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ES.23515.4	chr4	-	3805	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	1	-569	1	569	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGAGGCAGGTAGG	-27	True	NA	NA	False	AATAAA	-16	NA	59783865	59769067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.5	chr4	-	3652	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-38	-2176	3	516	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGAAATGATAGTACTT	-8	True	NA	NA	False	GATAAA	-18	NA	59783846	59769120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ES.23515.6	chr4	-	3279	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-59	-1782	-1	122	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCCTTCGTTGGTGTGCG	-29	True	NA	NA	False	NA	NA	NA	59783867	59769514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ES.23515.7	chr4	-	3255	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	-18	0	-18	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	NA	False	NA	NA	False	NA	NA	NA	59783884	59769636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ES.23515.8	chr4	-	3157	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-59	-1660	-1	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-29	True	NA	NA	False	NA	NA	NA	59783867	59769636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ES.23515.9	chr4	-	3691	5	NNC	ENSMUSG00000038544.15	novel	3237	5	NA	NA	275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.423387747501	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	305	False	NA	NA	False	NA	NA	NA	59783533	59769636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59782940
ES.23516.1	chr4	-	174	1	Intergenic	novelGene_19300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	59797451	59797277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59797300_59797500
ES.23517.1	chr4	-	1087	1	Intergenic	novelGene_19301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAACACTGCTTTTATA	NA	False	NA	NA	False	NA	NA	NA	59805468	59804381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59804400_59805500
ES.23518.1	chr4	+	7340	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	-23	-3	-23	3	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGCTCATTTTTGTCT	809	False	NA	21	True	AATAAA	-30	NA	59805816	59904740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.10	chr4	+	2097	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	8	9439	8	744	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTATGCTGTGGGCCCCT	-24	True	NA	NA	False	CATAAA	-14	NA	59805847	59895298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
ES.23518.11	chr4	+	1957	2	FSM	ENSMUSG00000028385.15	ENSMUST00000123665.2	586	2	-29	-1342	11	1342	multi-exon	FALSE	canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTGTATTGCTCCTGT	-21	True	NA	NA	False	ATTAAA	-19	NA	59805850	59835448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59833866
ES.23518.12	chr4	+	2591	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	17	4706	17	-502	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACGAGAAGAGCAACATC	-15	True	NA	NA	False	GATAAA	-20	NA	59805856	59900031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.13	chr4	+	3395	1	FSM	ENSMUSG00000080772.2	ENSMUST00000120410.2	543	1	-1130	-1722	-1130	1722	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59832546	59835941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59832500_59835900
ES.23518.14	chr4	+	1577	1	FSM	ENSMUSG00000080772.2	ENSMUST00000120410.2	543	1	-937	-97	-937	97	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATGGGGCTGAGGAGAC	NA	False	NA	NA	False	AATAAA	-35	NA	59832739	59834316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59832700_59834300
ES.23518.15	chr4	+	306	1	Intergenic	novelGene_19302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAATCAC	NA	False	NA	NA	False	NA	NA	NA	59839582	59839888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59839600_59839900
ES.23518.16	chr4	+	178	1	Intergenic	novelGene_19303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTAGAGCAAGAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	59839584	59839762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59839600_59839800
ES.23518.17	chr4	+	6264	4	ISM	ENSMUSG00000028385.15	ENSMUST00000145199.8	2303	6	1710	-4195	1624	-9	3prime_fragment	FALSE	canonical	3	102	junction_3	5.8878405775519	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCCGGATCATGTGC	1764	False	NA	9	True	AATAAA	-18	NA	59886403	59904728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.2	chr4	+	2457	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	-12	4869	-12	-665	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCCGTGCCCGCTGAC	820	False	NA	NA	False	NA	NA	NA	59805827	59899868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.3	chr4	+	7527	10	NNC	ENSMUSG00000028385.15	novel	7314	9	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4819688086959	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCCGGATCATGTGC	820	False	NA	9	True	AATAAA	-18	NA	59805827	59904728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59806226_59846347_59846551_59857444_59857637_59868237_59868356_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.4	chr4	+	7086	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	-10	238	-10	-238	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGTTGTATTTTTG	-42	True	NA	NA	False	NA	NA	NA	59805829	59904499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.5	chr4	+	3536	8	ISM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	1	8007	1	2176	5prime_fragment	FALSE	canonical	3	98	junction_2	9.81876587282262	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGTATGAGCCCTCA	-31	True	NA	NA	False	NA	NA	NA	59805840	59896730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524
ES.23518.6	chr4	+	7000	9	NNC	ENSMUSG00000028385.15	novel	7314	9	NA	NA	2	-238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0230193435503	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGTTGTATTTTTG	-30	True	NA	NA	False	NA	NA	NA	59805841	59904499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59806226_59857518_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.7	chr4	+	2279	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	3	5032	3	-828	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTTAGTGTATGTGTT	-29	True	NA	NA	False	AAAAAG	-18	NA	59805842	59899705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ES.23518.9	chr4	+	2185	9	NNC	ENSMUSG00000028385.15	novel	7314	9	NA	NA	5	-828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.4015783313308	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTTAGTGTATGTGTT	-27	True	NA	NA	False	AAAAAG	-18	NA	59805844	59899705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898999
ES.23519.1	chr4	-	168	1	Intergenic	novelGene_19304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGGGCATCT	NA	False	NA	NA	False	NA	NA	NA	59853862	59853694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59853700_59853900
ES.2352.1	chr10	-	8642	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-90	8	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTACTGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-26	NA	13350246	13083452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.10	chr10	-	3443	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-115	463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.1346572884776	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTCTTCTCTGCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	13350271	13088675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108283_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.12	chr10	-	3002	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-115	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGAAACCGTTCTT	NA	False	NA	6	True	AATAAA	-33	NA	13350271	13089126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.13	chr10	-	2725	12	NNC	ENSMUSG00000062866.17	novel	2735	12	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.617609522556	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATCTCCAAAGTCAG	9914	False	NA	-6	True	AATAAA	-21	NA	13200021	13089138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129626_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ES.2352.14	chr10	-	3209	13	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-153	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	19.1113331705445	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCATTATCTCCAAAGT	NA	False	NA	-9	True	AATAAA	-18	NA	13350309	13089141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129627_13133316_13133507_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.15	chr10	-	2440	11	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	260	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.7936159373336	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTTCATTATCTCCAA	NA	False	NA	-12	True	AATAAA	-15	NA	13349896	13089144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100601_13108279_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13142716_13142798_13167538_13167707_13349799
ES.2352.17	chr10	-	4162	8	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	68342	7	68342	-7	3prime_fragment	FALSE	canonical	3	35	junction_3	7.70369643583586	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTTCATTATCTCCA	NA	False	NA	-13	True	AATAAA	-14	NA	13131691	13089145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085
ES.2352.19	chr10	-	2972	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-114	-8	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTTCATTATCTCC	NA	False	NA	-14	True	AATAAA	-13	NA	13350270	13089146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.2	chr10	-	5573	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-137	2561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGTTCTGAAACTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13350293	13086577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.20	chr10	-	5198	9	ISM	ENSMUSG00000062866.17	ENSMUST00000105546.8	2808	13	128072	8	63608	-8	3prime_fragment	FALSE	canonical	1	1	junction_8	16.9189243156886	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTTCATTATCTCC	NA	False	NA	-14	True	AATAAA	-13	NA	13136425	13089146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13133320
ES.2352.21	chr10	-	2702	12	NNC	ENSMUSG00000062866.17	novel	2735	12	NA	NA	33	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.617609522556	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTCTTCATTATCTC	9935	False	NA	-15	True	AATAAA	-12	NA	13200000	13089147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ES.2352.22	chr10	-	10567	11	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	9	-176	intron_retention	FALSE	canonical	3	35	junction_3	7.2587877775838	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGCTCGCACTGTGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	13350147	13089314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.23	chr10	-	2685	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	10	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCTTGCTCGCACTG	NA	False	NA	NA	False	ATTAAA	-28	NA	13350146	13089318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.24	chr10	-	2539	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	14	182	14	-182	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCATGCTTGCTCGCAC	9916	False	NA	NA	False	ATTAAA	-26	NA	13200019	13089320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ES.2352.25	chr10	-	2776	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-92	-182	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCATGCTTGCTCGCAC	NA	False	NA	NA	False	ATTAAA	-26	NA	13350248	13089320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.26	chr10	-	2324	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-90	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.9501302902257	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCCCAAGCATGCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	13350246	13089327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100601_13108277_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129180_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.27	chr10	-	2401	11	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-90	-396	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	14.8727939540626	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGCATTTGGTAGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	13350246	13089534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13142716_13142798_13167538_13167707_13349799
ES.2352.28	chr10	-	7866	4	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	68024	21980	68024	-21117	internal_fragment	FALSE	canonical	3	44	junction_3	2.44948974278318	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13132009	13111118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13115710_13121154_13121312_13122745_13122940_13129085
ES.2352.29	chr10	-	7693	2	Intergenic	novelGene_1798	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAACAACATAG	8937	False	NA	NA	False	NA	NA	NA	13326572	13265886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13273569_13326561
ES.2352.3	chr10	-	3805	12	NNC	ENSMUSG00000062866.17	novel	2735	12	NA	NA	-1744	1206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.350451577604	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAACAGTGTTTTCCTT	NA	False	NA	NA	False	CATAAA	-21	NA	13351900	13087932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13351810
ES.2352.30	chr10	-	8157	1	Intergenic	novelGene_1797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAACAACATAG	NA	False	NA	NA	False	NA	NA	NA	13274043	13265886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13265900_13274000
ES.2352.31	chr10	-	172	1	Intergenic	novelGene_1799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGATAAGAAAAATA	4827	False	NA	0	True	NA	NA	NA	13319457	13319285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13319300_13319500
ES.2352.4	chr10	-	3929	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	8	-1202	8	1202	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGCAACAGTGTTTT	9910	False	NA	NA	False	CATAAA	-17	NA	13200025	13087936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ES.2352.5	chr10	-	4195	13	NIC	ENSMUSG00000062866.17	novel	2808	13	NA	NA	111	1200	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	18.0852533542909	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACTTGCAACAGTGTT	NA	False	NA	NA	False	CATAAA	-15	NA	13350045	13087938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13133320_13133561_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.6	chr10	-	3860	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	16	1001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTGCTTTTGAAATAG	NA	False	NA	NA	False	GGGGCT	-39	NA	13350140	13088137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.7	chr10	-	3716	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	121	971	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTCGTCCCTCTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	13350035	13088167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.2352.8	chr10	-	3194	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	7	-466	7	466	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTTCTCTGCAGTGTT	9909	False	NA	NA	False	ATTAAA	-19	NA	13200026	13088672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ES.2352.9	chr10	-	3472	12	NNC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	-134	463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.4630992371041	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTCTTCTCTGCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	13350290	13088675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129633_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ES.23520.1	chr4	-	5403	1	Intergenic	novelGene_19305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGGGGGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	59879172	59873769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59873800_59879200
ES.23520.2	chr4	-	1509	1	Intergenic	novelGene_19306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATCCCAAGATCCTGAAA	NA	False	NA	NA	False	NA	NA	NA	59879177	59877668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59877700_59879200
ES.23521.1	chr4	-	1753	1	Genic_Genomic	ENSMUSG00000028386.2	novel	NA	NA	NA	NA	8208	30	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	8201	False	NA	NA	False	AAAACA	-33	NA	59906848	59905095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_59905100_59906800
ES.23522.1	chr4	+	196	1	Intergenic	novelGene_19307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAGAGTAAAGCA	4968	False	NA	NA	False	NA	NA	NA	59910097	59910293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59910100_59910300
ES.23523.1	chr4	-	166	1	Intergenic	novelGene_19308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAGAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	59918856	59918690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_59918700_59918900
ES.23524.1	chr4	+	927	7	FSM	ENSMUSG00000078689.9	ENSMUST00000107521.8	642	7	-134	-151	-134	-3	multi-exon	FALSE	canonical	3	12	junction_2	4.92442890089805	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTCTCTGTGTCC	23	False	NA	NA	False	AATAAA	-18	NA	59964159	60007271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_59964368_60003977_60004112_60004813_60004888_60005471_60005583_60005921_60006024_60006188_60006235_60007019
ES.23524.2	chr4	+	4413	1	Intergenic	novelGene_19309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCAATTTGTTCTTG	NA	False	NA	NA	False	TATAAA	-8	NA	59984525	59988938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_59984500_59988900
ES.23525.1	chr4	+	158	1	Intergenic	novelGene_19310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	60104047	60104205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_60104000_60104200
ES.23526.1	chr4	-	178	1	Intergenic	novelGene_19311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	61939494	61939316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_61939300_61939500
ES.23527.1	chr4	+	825	1	Intergenic	novelGene_19312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTACAGCGGGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	62126817	62127642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62126800_62127600
ES.23528.1	chr4	-	3738	5	NNC	ENSMUSG00000028389.13	novel	2017	4	NA	NA	-2002	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.3031859428029	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATTTTATTTTATATT	NA	False	NA	NA	False	ATTAAA	-25	NA	62128685	62107770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565_62126740_62128491
ES.23528.10	chr4	-	3531	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222748.2	2564	4	-39	-928	-39	0	multi-exon	FALSE	canonical	2	4	junction_3	15.556349186104	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126478	62107776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126314
ES.23528.11	chr4	-	4369	5	NNC	ENSMUSG00000028389.13	novel	3494	4	NA	NA	2497	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGAAAGTGGTATTT	4031	False	NA	NA	False	ATTAAA	-14	NA	62146787	62107781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62110927_62122755_62122888_62123260_62123346_62144140_62144794_62146433
ES.23528.12	chr4	-	2027	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	-20	10	-4	-4	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACCTAAACAGAAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	62126687	62109235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
ES.23528.14	chr4	-	3416	1	Intergenic	novelGene_19313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTGGGAAGTACACT	8567	False	NA	NA	False	ATTAAA	-16	NA	62142251	62138835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62138800_62142300
ES.23528.2	chr4	-	3580	5	NNC	ENSMUSG00000028389.13	novel	1776	4	NA	NA	-35	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATTTTATTTTATATT	NA	False	NA	NA	False	ATTAAA	-25	NA	62126718	62107770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62110927_62122755_62122888_62123260_62123346_62126153_62126208_62126565
ES.23528.3	chr4	-	3765	5	NNC	ENSMUSG00000028389.13	novel	3494	4	NA	NA	-2025	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.931848688197	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGTATTTTATTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	62128708	62107773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556_62126740_62128496
ES.23528.5	chr4	-	3449	4	NNC	ENSMUSG00000028389.13	novel	3494	4	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.4419672692682	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126508	62107776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62110927_62122755_62122888_62123260_62123346_62126426
ES.23528.8	chr4	-	3397	3	FSM	ENSMUSG00000028389.13	ENSMUST00000129511.3	1691	3	-82	-1624	3	0	multi-exon	FALSE	canonical	1	1	junction_2	18	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126680	62107776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62110927_62122755_62122888_62126565
ES.23529.1	chr4	+	6734	2	Antisense	novelGene_ENSMUSG00000028389.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGTCCTGTAAACTTAT	NA	False	NA	6	True	AATAAA	-20	NA	62149220	62157617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_62149549_62151211
ES.2353.1	chr10	+	2588	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.0342236024534	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTCCCTCATATTCA	NA	False	NA	38	True	AATGAA	-24	NA	13376436	13391287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13377118_13378814_13379470_13381676_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.10	chr10	+	2015	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-22	80	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	52.8471032936585	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATTATTTTATAATATT	NA	False	NA	9	True	AATACA	-19	NA	13376805	13391367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390608_13390860
ES.2353.11	chr10	+	1907	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	61	39	-22	6	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTCCAATGAATTCC	NA	False	NA	-1	True	CATAAA	-43	NA	13376805	13391248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.12	chr10	+	1587	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	63	4091	-20	-554	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAATGATACAAAAACT	NA	False	NA	NA	False	ACTAAA	-10	NA	13376807	13390688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ES.2353.13	chr10	+	5676	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	63	2	-20	-2	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACTAGCCCTTGACCT	NA	False	NA	NA	False	AATAAA	-18	NA	13376807	13394777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ES.2353.15	chr10	+	2144	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	87	3510	4	-18	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATCTTTTCATCTTAA	NA	False	NA	20	True	AATGAA	-33	NA	13376831	13391269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ES.2353.16	chr10	+	2049	6	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_5	61.6733329730119	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTCCCTCATATTCA	NA	False	NA	38	True	AATGAA	-24	NA	13376835	13391287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13390450
ES.2353.17	chr10	+	2618	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	157	2966	74	526	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGCTACTGGTATGA	NA	False	NA	NA	False	NA	NA	NA	13376901	13391813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ES.2353.18	chr10	+	1880	6	NIC	ENSMUSG00000019810.16	novel	5741	7	NA	NA	74	-1	intron_retention	FALSE	canonical	2	4	junction_3	66.8448950930436	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACTTCCCTCATATTC	NA	False	NA	37	True	AATGAA	-23	NA	13376901	13391286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382978_13383170_13388361_13388471_13390450
ES.2353.19	chr10	+	1769	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	74	-25	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	52.8471032936585	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAGACTATGTAATGAA	NA	False	NA	-32	True	CATAAA	-12	NA	13376901	13391217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390608_13390860
ES.2353.2	chr10	+	2060	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	39	-92	39	92	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTTTAGTATGTATT	NA	False	NA	21	True	AATACA	-31	NA	13376783	13391379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.20	chr10	+	4127	6	ISM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	157	-55	74	55	intron_retention	FALSE	canonical	3	139	junction_3	16.0573970493352	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTCACCGCCTAG	NA	False	NA	-16	True	NA	NA	NA	13376901	13391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361
ES.2353.21	chr10	+	1713	7	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	75	75	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	65.9884249109056	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTGCAATTATTTTATA	NA	False	NA	4	True	AATACA	-14	NA	13376902	13391362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.22	chr10	+	2142	7	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	75	20	intron_retention	FALSE	canonical	3	69	junction_6	37.8579215253852	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCGTAATTATCTTTTC	NA	False	NA	13	True	AATGAA	-26	NA	13376902	13391262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.23	chr10	+	7310	7	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	84	-2	intron_retention	FALSE	canonical	3	69	junction_6	36.1267060343022	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACTAGCCCTTGACCT	NA	False	NA	NA	False	AATAAA	-18	NA	13376911	13394777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13390619_13390860
ES.2353.24	chr10	+	1645	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	92	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.5911304023064	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCGTAATTATCTTTTC	NA	False	NA	13	True	AATGAA	-26	NA	13376919	13391262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13377118_13378814_13379003_13381649_13381823_13382449_13382666_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.25	chr10	+	2403	6	NIC	ENSMUSG00000019810.16	novel	5741	7	NA	NA	96	15	intron_retention	FALSE	canonical	3	139	junction_3	15.3179633110933	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTCTATTTGCTTC	NA	False	NA	53	True	AATGAA	-39	NA	13376923	13391302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13383170_13388361_13388471_13390450
ES.2353.26	chr10	+	4941	4	NIC	ENSMUSG00000019810.16	novel	5741	7	NA	NA	125	20	intron_retention	FALSE	canonical	3	152	junction_2	11.7284080571728	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCGTAATTATCTTTTC	NA	False	NA	13	True	AATGAA	-26	NA	13376952	13391262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13383170_13388361
ES.2353.27	chr10	+	3984	2	ISM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	8660	-81	3624	81	intron_retention	FALSE	canonical	3	173	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTTATAATATTT	NA	False	NA	10	True	AATACA	-20	NA	13385404	13391368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_13388471_13390450
ES.2353.28	chr10	+	3850	1	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	5589	-23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGACTATGTAATGAATT	NA	False	NA	-30	True	CATAAA	-14	NA	13387369	13391219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13387400_13391200
ES.2353.3	chr10	+	5455	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	42	-3490	-41	-2	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACTAGCCCTTGACCT	NA	False	NA	NA	False	AATAAA	-18	NA	13376786	13394777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.4	chr10	+	1889	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-33	73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.0342236024534	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCACTGCAATTATTTTA	NA	False	NA	2	True	AATACA	-12	NA	13376794	13391360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13377118_13378814_13379003_13381623_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.5	chr10	+	3693	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	50	-1736	-33	1736	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTCTCAACATGGGCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	13376794	13393023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.6	chr10	+	1680	7	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-32	-20	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	65.9884249109056	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTATGTAATGAATTTGA	NA	False	NA	-27	True	CATAAA	-17	NA	13376795	13391222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.7	chr10	+	2479	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	55	-527	-28	527	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGGTATGAA	NA	False	NA	NA	False	NA	NA	NA	13376799	13391814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ES.2353.8	chr10	+	2369	7	NIC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	-28	526	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	59.6641060903082	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGCTACTGGTATGA	NA	False	NA	NA	False	NA	NA	NA	13376799	13391813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13390450_13390619_13390860
ES.2353.9	chr10	+	2288	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	55	3398	-28	94	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTAGTATGTATTCT	NA	False	NA	23	True	AATACA	-33	NA	13376799	13391381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ES.23530.1	chr4	-	243	1	Intergenic	novelGene_19314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAGAATAAATCTGTAG	NA	False	NA	NA	False	AATAAA	-40	NA	62180302	62180059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62180100_62180300
ES.23531.1	chr4	+	189	1	Intergenic	novelGene_19315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATATATATAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	62194370	62194559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62194400_62194600
ES.23532.1	chr4	+	1844	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	-24	0	-24	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204661	62216648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ES.23532.2	chr4	+	1649	3	NIC	ENSMUSG00000066152.12	novel	1820	4	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	50	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204666	62216648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62204812_62210868_62210936_62215211
ES.23532.3	chr4	+	5781	3	NNC	ENSMUSG00000066152.12	novel	1820	4	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	53.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204686	62216648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62204812_62210868_62213914_62214037
ES.23532.4	chr4	+	1016	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	25	779	25	155	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCCTGGTTGGCAGTT	NA	False	NA	NA	False	AAAACA	-13	NA	62204710	62215869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ES.23532.5	chr4	+	2691	3	ISM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	27	0	27	0	intron_retention	FALSE	canonical	3	104	junction_2	1.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204712	62216648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62204812_62210868_62210936_62214123
ES.23532.6	chr4	+	4292	1	NIC	ENSMUSG00000066152.12	novel	1820	4	NA	NA	2573	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	4319	False	NA	9	True	AATAAA	-20	NA	62212356	62216648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62212400_62216600
ES.23533.1	chr4	+	175	1	Intergenic	novelGene_19316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAATGAGC	NA	False	NA	NA	False	NA	NA	NA	62255975	62256150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62256000_62256200
ES.23534.1	chr4	-	2721	2	ISM	ENSMUSG00000066151.13	ENSMUST00000139308.2	3279	18	29045	-1983	29045	1983	3prime_fragment	FALSE	canonical	3	121	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTAAAACCATCTTTTC	7064	False	NA	NA	False	ATTAAA	-26	NA	62221486	62216595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62219228_62221397
ES.23534.10	chr4	-	5107	27	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	20	-1	intron_retention	FALSE	canonical	3	62	junction_17	15.9245632899722	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	7015	False	NA	-2	True	AATAAA	-45	NA	62278686	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.11	chr4	-	3797	7	ISM	ENSMUSG00000066151.13	ENSMUST00000139308.2	3279	18	22402	1	22402	-1	3prime_fragment	FALSE	canonical	3	90	junction_6	15.98697386416	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	421	False	NA	-2	True	AATAAA	-45	NA	62228129	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174
ES.23534.12	chr4	-	3994	29	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	21	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.4421432641849	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	7016	False	NA	-2	True	AATAAA	-45	NA	62278685	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62218901_62219147_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.13	chr4	-	5968	27	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	62	junction_18	17.9315348151909	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTTGTGTTCCTTTTT	6885	False	NA	-4	True	AATAAA	-43	NA	62278816	62218581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.15	chr4	-	2404	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17635	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	34.5643075733435	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGTTGTGTTCCTTTT	NA	False	NA	-5	True	AATAAA	-42	NA	62232896	62218582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232796
ES.23534.18	chr4	-	4294	29	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.4279429544542	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGACTGTTGTGTTCCTT	6989	False	NA	-7	True	AATAAA	-40	NA	62278712	62218584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247366_62247398_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.19	chr4	-	2368	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17615	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.1530381619558	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGACTGTTGTGTTCCT	NA	False	NA	-8	True	AATAAA	-39	NA	62232916	62218585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232849
ES.23534.2	chr4	-	3322	12	ISM	ENSMUSG00000066151.13	ENSMUST00000139308.2	3279	18	8990	-708	8990	708	3prime_fragment	FALSE	canonical	3	75	junction_9	20.2080092132708	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTATGTGTGTTTGGCC	NA	False	NA	NA	False	TTTAAA	-18	NA	62241541	62217870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433
ES.23534.20	chr4	-	4229	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	24.504471751141	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGACTGTTGTGTTCCT	7016	False	NA	-8	True	AATAAA	-39	NA	62278685	62218585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250530_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.22	chr4	-	4118	27	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-10	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	25.1346668824144	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGGACTGTTGTGTTC	6984	False	NA	-10	True	AATAAA	-37	NA	62278717	62218587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.23	chr4	-	4184	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	21	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	24.7540992988791	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	7016	False	NA	-16	True	AATAAA	-31	NA	62278685	62218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256830_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.24	chr4	-	3947	24	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	26.3647527778266	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	6970	False	NA	-16	True	AATAAA	-31	NA	62278731	62218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256876_62270669_62270783_62278606
ES.23534.25	chr4	-	4335	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	14	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	29.7767182416992	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	7009	False	NA	-16	True	AATAAA	-31	NA	62278692	62218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263646_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.26	chr4	-	4157	27	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	19	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	30.3404742662046	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	7014	False	NA	-16	True	AATAAA	-31	NA	62278687	62218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62263744_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.27	chr4	-	4262	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	29.8245900699323	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTCCAGGACTGTT	6970	False	NA	-16	True	AATAAA	-31	NA	62278731	62218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264382_62270669_62270769_62278606
ES.23534.28	chr4	-	4124	27	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	21	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.4743494388331	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTTCCAGGACTGT	7016	False	NA	-17	True	AATAAA	-30	NA	62278685	62218594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239225_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62263744_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.3	chr4	-	4660	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	22	416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	24.6851782390032	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGCATGATTTTAAA	7017	False	NA	NA	False	TTTAAA	-7	NA	62278684	62218162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.30	chr4	-	2557	9	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17715	-16	intron_retention	FALSE	canonical	3	8	junction_8	38.0452033770356	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTTCCAGGACTGT	NA	False	NA	-17	True	AATAAA	-30	NA	62232816	62218594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232767
ES.23534.31	chr4	-	2400	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17655	-17	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	35.932034608565	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGGTTTCCAGGACTG	NA	False	NA	-18	True	AATAAA	-29	NA	62232876	62218595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232767
ES.23534.33	chr4	-	4106	26	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	12	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	25.4534555610825	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGTTTCCAGGACT	6982	False	NA	-19	True	AATAAA	-28	NA	62278719	62218596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258937_62270669_62270783_62278606
ES.23534.35	chr4	-	3949	5	NNC	ENSMUSG00000066151.13	novel	4883	21	NA	NA	25256	-18	intron_retention	FALSE	canonical	0	0	junction_2	59.8054136345532	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGTTTCCAGGACT	3275	False	NA	-19	True	AATAAA	-28	NA	62225275	62218596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62221495_62222427_62223114_62223359_62223468_62224146_62224260_62225131
ES.23534.36	chr4	-	4055	25	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-12	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.9570960111745	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGTTTCCAGGACT	6958	False	NA	-19	True	AATAAA	-28	NA	62278743	62218596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258573_62270669_62270783_62278606
ES.23534.38	chr4	-	4363	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	10	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	29.7848250367387	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTGAGTTTGGTTTCC	6980	False	NA	-25	True	AATAAA	-22	NA	62278721	62218602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258364_62258570_62258858_62258934_62263744_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.39	chr4	-	4081	26	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-7649	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	30.7098941710974	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTGAGTTTGGTTTCC	NA	False	NA	-25	True	AATAAA	-22	NA	62264381	62218602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263646_62263815_62264339
ES.23534.4	chr4	-	4228	28	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	24.7540992988791	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	7000	False	NA	-1	True	NA	NA	NA	62278701	62218578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239225_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.40	chr4	-	5594	27	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	24.3230538120846	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTTTTGTCTCTGTTG	6973	False	NA	NA	False	AATAAA	-23	NA	62278728	62219442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.42	chr4	-	5694	27	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	29.4930540413568	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAATTGGTCTTTTGT	6963	False	NA	NA	False	AATAAA	-15	NA	62278738	62219450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263646_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.43	chr4	-	4420	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	-60	-2023	-46	7	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCTCCAATTGGTCTA	6870	False	NA	NA	False	NA	NA	NA	62278831	62236855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.45	chr4	-	2227	4	NNC	ENSMUSG00000066151.13	novel	1739	4	NA	NA	-26	380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.108567533594	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAACAATTATATTGTAA	6890	False	NA	NA	False	AAAAAG	-6	NA	62278811	62261993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.46	chr4	-	587	4	NNC	ENSMUSG00000066151.13	novel	1739	4	NA	NA	3	-1177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.108567533594	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGAATGCTTGCTTTAG	6973	False	NA	NA	False	ATTAAA	-13	NA	62278728	62263550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.5	chr4	-	4403	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	-140	1	-62	-1	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	6854	False	NA	-2	True	AATAAA	-45	NA	62278847	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.6	chr4	-	10824	27	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	-12	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	34.4417224964244	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	6958	False	NA	-2	True	AATAAA	-45	NA	62278743	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62236620_62236764_62239225_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62258570_62258858_62263815_62264293_62264382_62270669_62270783_62278606
ES.23534.7	chr4	-	6823	6	NNC	ENSMUSG00000066151.13	novel	4883	21	NA	NA	17650	-1	intron_retention	FALSE	canonical	1	1	junction_5	44.5421149026402	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	NA	False	NA	-2	True	AATAAA	-45	NA	62232881	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62221495_62222427_62223144_62223359_62223468_62224146_62226331_62230494_62230632_62232118
ES.23534.8	chr4	-	4260	28	NNC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.8447028410335	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	7015	False	NA	-2	True	AATAAA	-45	NA	62278686	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239317_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ES.23534.9	chr4	-	1990	6	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	25863	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	43.9790859386595	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTTCCTTTTTGG	3882	False	NA	-2	True	AATAAA	-45	NA	62224668	62218579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62224367
ES.23535.1	chr4	+	1551	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-49	2216	-49	-2216	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAGTTTGTATTGTGT	NA	False	NA	45	True	NA	NA	NA	62278914	62307790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ES.23535.10	chr4	+	3787	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	372.109338770206	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATTCTATGCATGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	62278954	62309996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303546_62303617_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ES.23535.11	chr4	+	3612	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	315.653861056696	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGCATGTCTGTCTA	NA	False	NA	17	True	AATAAA	-17	NA	62278954	62310000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834_62307313_62307421
ES.23535.12	chr4	+	3857	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	374.776733536115	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGCATGTCTGTCTA	NA	False	NA	17	True	AATAAA	-17	NA	62278965	62310000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62279923_62280069_62303728_62303916_62304327_62304401_62306101_62306273_62306834
ES.23535.13	chr4	+	3702	5	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	329.565907672502	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGCATGTCTGTCTA	NA	False	NA	17	True	AATAAA	-17	NA	62278971	62310000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279075_62303724_62303916_62304327_62304401_62306103_62306273_62306834
ES.23535.15	chr4	+	3509	4	NIC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	357.107826853459	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCTGTCTACACACTG	NA	False	NA	24	True	AATAAA	-24	NA	62278986	62310007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62279081_62304327_62304401_62306103_62306273_62306834
ES.23535.16	chr4	+	3524	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	315.653861056696	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCTGTCTACACA	NA	False	NA	21	True	AATAAA	-21	NA	62278986	62310004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834_62308682_62308850
ES.23535.18	chr4	+	3403	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	24	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	315.653861056696	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTCTACACACTGTC	NA	False	NA	26	True	AATAAA	-26	NA	62278987	62310009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834_62309274_62309567
ES.23535.19	chr4	+	2464	1	Intergenic	novelGene_19319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAGATCA	1126	False	NA	NA	False	NA	NA	NA	62292678	62295142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62292700_62295100
ES.23535.2	chr4	+	3771	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-49	-4	-49	4	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTACACACTGTCC	NA	False	NA	27	True	AATAAA	-27	NA	62278914	62310010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ES.23535.3	chr4	+	3697	6	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	-29	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	315.653861056696	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATTCTATGCATGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	62278934	62309996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834_62307683_62307722
ES.23535.4	chr4	+	910	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	-24	2832	-24	-2832	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATAGTGGTTTTTCTA	NA	False	NA	NA	False	AATAGA	-17	NA	62278939	62307174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ES.23535.8	chr4	+	5713	4	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	382.467718318233	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTCTGTCTACACAC	NA	False	NA	22	True	AATAAA	-22	NA	62278952	62310005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62305741_62305870_62306273_62306834
ES.23535.9	chr4	+	3650	5	NNC	ENSMUSG00000066150.13	novel	3718	5	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	344.022528332085	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTATGCATGTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	62278954	62309998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62279081_62303728_62303847_62304327_62304401_62306103_62306273_62306834
ES.23536.1	chr4	-	386	1	Intergenic	novelGene_19317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAGGCTAACCAAAGA	5527	False	NA	NA	False	NA	NA	NA	62280174	62279788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62279800_62280200
ES.23537.1	chr4	-	179	1	Intergenic	novelGene_19318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	62286848	62286669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62286700_62286800
ES.23538.1	chr4	+	3617	1	Antisense	novelGene_ENSMUSG00000066149.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGAATTTTGCTACAT	NA	False	NA	NA	False	NA	NA	NA	62311128	62314745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_62311100_62314700
ES.23539.1	chr4	+	2843	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	-129	2509	-129	1150	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATCCTAATTTATGT	NA	False	NA	37	True	ATTAAA	-25	NA	62326904	62342718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.10	chr4	+	2779	15	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	7	1145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	102.958110166123	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327040	62342713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62331005_62331083_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.11	chr4	+	5506	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	10	1140	intron_retention	FALSE	canonical	3	246	junction_9	29.3005261613735	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAACTGGAAAAAATCC	NA	False	NA	27	True	ATTAAA	-15	NA	62327043	62342708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.12	chr4	+	2891	12	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	10	1143	intron_retention	FALSE	canonical	3	246	junction_9	29.752977488337	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGGAAAAAATCCTAA	NA	False	NA	30	True	ATTAAA	-18	NA	62327043	62342711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340959_62341454
ES.23539.13	chr4	+	5625	12	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	10	1145	intron_retention	FALSE	canonical	3	246	junction_9	29.0829534576216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327043	62342713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62340760_62340839_62340959_62341454
ES.23539.14	chr4	+	2846	13	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	11	1140	intron_retention	FALSE	canonical	3	7	junction_7	84.4283062064429	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAACTGGAAAAAATCC	NA	False	NA	27	True	ATTAAA	-15	NA	62327044	62342708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334849_62334948_62336082_62336207_62337512_62337603_62340414_62340760_62340839_62340959_62341454
ES.23539.15	chr4	+	2510	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	12	1145	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	83.5886090059857	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327045	62342713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.16	chr4	+	4638	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	14	571	14	-571	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAGAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62327047	62344656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.17	chr4	+	1577	14	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	23	-210	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	82.7295443888874	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATGTGTTTTGTCGG	NA	False	NA	NA	False	AATGAA	-41	NA	62327056	62341358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341208
ES.23539.18	chr4	+	2620	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	23	1266	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	83.5886090059857	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTCTTTGAAAGGATT	NA	False	NA	4	True	AGTAAA	-11	NA	62327056	62342834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.19	chr4	+	1573	5	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	24	1083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.213403381876	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTGTTGGTTATTTA	NA	False	NA	21	True	TTTAAA	-30	NA	62327057	62342651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327898_62340669_62340760_62340839_62340959_62341454
ES.23539.2	chr4	+	5301	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	-39	-39	-39	39	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTTCTAATTGTGTT	NA	False	NA	NA	False	TATAAA	-17	NA	62326994	62345266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.20	chr4	+	2938	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	24	1284	intron_retention	FALSE	canonical	3	246	junction_9	29.3005261613735	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATTTCAGCATT	NA	False	NA	22	True	AGTAAA	-29	NA	62327057	62342852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340760_62340839_62340959_62341454
ES.23539.21	chr4	+	2594	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	25	1145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	84.6907364080236	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327058	62342713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.22	chr4	+	5254	15	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.958110166123	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTCTGACAGCTTAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	62327075	62345224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62331005_62331082_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.23	chr4	+	5152	14	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	49	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0028872385824	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTCAAGTTCTGATCTC	NA	False	NA	NA	False	AATAAA	-39	NA	62327082	62345211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329938_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.24	chr4	+	1689	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	50	3484	50	175	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCATGTGTTGGATTG	NA	False	NA	NA	False	NA	NA	NA	62327083	62341743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.25	chr4	+	2064	13	ISM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	901	2931	901	728	3prime_fragment	FALSE	canonical	3	246	junction_8	29.3005261613735	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62327934	62342296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.26	chr4	+	3123	12	NNC	ENSMUSG00000066148.4	novel	912	3	NA	NA	3162	1143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.3122746351812	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGGAAAAAATCCTAA	NA	False	NA	30	True	ATTAAA	-18	NA	62330195	62342711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62331082_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.27	chr4	+	4792	11	ISM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	5706	1	5706	-1	3prime_fragment	FALSE	canonical	3	246	junction_6	31.319163462647	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTGACAGCTTAGTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	62332739	62345226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.28	chr4	+	1849	2	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	-3459	1140	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAACTGGAAAAAATCC	NA	False	NA	27	True	ATTAAA	-15	NA	62336621	62342708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62337941_62342178
ES.23539.3	chr4	+	2876	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	-28	2375	-28	1284	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATTTCAGCATT	NA	False	NA	22	True	AGTAAA	-29	NA	62327005	62342852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.5	chr4	+	2677	14	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	-15	1147	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_11	78.6869311645503	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAAAAAATCCTAATTTA	NA	False	NA	34	True	ATTAAA	-22	NA	62327018	62342715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340489_62340651_62340760_62340839_62340959_62341454
ES.23539.6	chr4	+	2753	14	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	-10	1140	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	81.1881444109878	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAACTGGAAAAAATCC	NA	False	NA	27	True	ATTAAA	-15	NA	62327023	62342708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334849_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ES.23539.7	chr4	+	2829	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	-6	1145	intron_retention	FALSE	canonical	3	246	junction_9	29.3005261613735	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327027	62342713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340760_62340839_62340959_62341454
ES.23539.8	chr4	+	5335	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	246	junction_9	29.3005261613735	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTCTGACAGCTTAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	62327032	62345224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340760_62340839_62340959_62341454
ES.23539.9	chr4	+	4983	13	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	108.874800675924	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAGCTTAGTCTATAA	NA	False	NA	NA	False	AATAAA	-20	NA	62327039	62345229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62327139_62327811_62327990_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340489_62340651_62340760_62340839_62340959_62341454
ES.2354.1	chr10	-	160	1	Intergenic	novelGene_1800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAAAAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	13398777	13398617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13398600_13398800
ES.23540.1	chr4	-	2940	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	4	-2290	4	2239	multi-exon	FALSE	canonical	3	31	junction_2	175	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTTTTCCCTTGAA	2685	False	NA	NA	False	AATAAA	-21	NA	62326858	62310580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62326788
ES.23540.10	chr4	-	795	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	18	6	1	-6	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGAGACGTCCTT	2682	False	NA	NA	False	AATAAA	-12	NA	62326861	62312825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ES.23540.11	chr4	-	699	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	0	-45	0	-6	multi-exon	FALSE	canonical	3	31	junction_2	175	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGAGACGTCCTT	2681	False	NA	NA	False	AATAAA	-12	NA	62326862	62312825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62326788
ES.23540.12	chr4	-	1891	1	ISM	ENSMUSG00000066149.12	ENSMUST00000156854.2	3143	2	2792	0	2792	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8584	False	NA	NA	False	NA	NA	NA	62320959	62319068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62319100_62321000
ES.23540.2	chr4	-	3090	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	-32	-2239	-32	2239	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTTTTCCCTTGAA	2632	False	NA	NA	False	AATAAA	-21	NA	62326911	62310580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ES.23540.3	chr4	-	2289	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	32	-1502	15	1502	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGGATCTGTTTGTTTC	2696	False	NA	NA	False	NA	NA	NA	62326847	62311317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ES.23540.4	chr4	-	1579	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-777	0	777	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGACTCTTTATTATT	2681	False	NA	NA	False	AATAAA	-21	NA	62326862	62312042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ES.23540.5	chr4	-	1570	4	NNC	ENSMUSG00000066149.12	novel	819	4	NA	NA	3	777	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	179.369884750912	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGACTCTTTATTATT	2684	False	NA	NA	False	AATAAA	-21	NA	62326859	62312042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62313259_62320960_62321153_62322692_62322780_62326784
ES.23540.7	chr4	-	1724	5	NNC	ENSMUSG00000066149.12	novel	4326	5	NA	NA	4	770	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.750327653716	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTACATAAGACTCTT	2685	False	NA	NA	False	AATAAA	-14	NA	62326858	62312049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62313259_62320960_62321153_62322692_62322790_62326119_62326276_62326788
ES.23540.8	chr4	-	4207	2	ISM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	2151	0	-977	0	intron_retention	FALSE	canonical	3	381	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	4815	False	NA	NA	False	AATAAA	-18	NA	62324728	62312819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62313259_62320960
ES.23540.9	chr4	-	4805	3	ISM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	13	0	-4	0	intron_retention	FALSE	canonical	3	381	junction_1	0.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	2677	False	NA	NA	False	AATAAA	-18	NA	62326866	62312819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_62313259_62320960_62321153_62322692
ES.23541.1	chr4	-	1824	1	Intergenic	novelGene_19320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	7224	False	NA	NA	False	NA	NA	NA	62329906	62328082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62328100_62329900
ES.23542.1	chr4	-	2631	1	Intergenic	novelGene_19321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	62364736	62362105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62362100_62364700
ES.23543.1	chr4	+	157	1	Intergenic	novelGene_19322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	3070	False	NA	NA	False	NA	NA	NA	62383086	62383243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62383100_62383200
ES.23544.1	chr4	-	5874	11	FSM	ENSMUSG00000028391.17	ENSMUST00000107452.8	1437	11	-19	-4418	-10	-563	multi-exon	FALSE	canonical	3	12	junction_8	57	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	62389143	62367452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381711_62382163_62382307_62387073_62387171_62389055
ES.23544.10	chr4	-	2579	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	1	-31	1	31	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389123	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ES.23544.11	chr4	-	2277	10	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389122	62370868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.12	chr4	-	2372	10	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	79.5567970107978	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389131	62370868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388969
ES.23544.13	chr4	-	3980	9	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	150	junction_2	21.3526930385841	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389127	62370868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.15	chr4	-	6595	8	NNC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_7	70.4950425236283	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389121	62370868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62372175_62374047_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389037
ES.23544.16	chr4	-	2296	10	NNC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.1972145724285	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389123	62370868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389037
ES.23544.18	chr4	-	2380	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-8	-932	1	-70	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389132	62370938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.19	chr4	-	2470	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	8	71	-5	-71	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62389116	62370939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ES.23544.20	chr4	-	2135	11	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	1	-392	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	58.0241329103676	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGGGCTCTGCACCGT	NA	False	NA	NA	False	AATAAA	-23	NA	62389123	62371260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388969
ES.23544.21	chr4	-	1470	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	1	-31	1	31	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTCTCACTCCATAGC	NA	False	NA	NA	False	NA	NA	NA	62389123	62371839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.22	chr4	-	1369	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-27	98	-18	-98	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGGCTTTGTGTTTT	NA	False	NA	-2	True	NA	NA	NA	62389151	62371968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.23	chr4	-	5914	8	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	-1	-100	intron_retention	FALSE	canonical	3	163	junction_5	16.637798127475	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389125	62371970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.24	chr4	-	4057	9	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	2	-100	intron_retention	FALSE	canonical	3	150	junction_2	21.4967294023998	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389131	62371970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62377121_62378558_62378660_62378756_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.25	chr4	-	4325	10	NNC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	0	-100	intron_retention	FALSE	canonical	0	0	junction_2	82.3395559202004	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389124	62371970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62372175_62374047_62377121_62377194_62377480_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.27	chr4	-	1059	9	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	3	-102	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	63.3560129348431	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTGTGGCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	62389121	62371972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62387073_62387171_62389055
ES.23544.28	chr4	-	3232	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	-12	-102	intron_retention	FALSE	canonical	3	150	junction_1	20.2100085216322	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTGTGGCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	62389145	62371972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.3	chr4	-	2656	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	0	-1216	0	214	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTAACATGTATCATT	NA	False	NA	NA	False	TTTAAA	-19	NA	62389124	62370654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.30	chr4	-	1174	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	2	-110	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCCCTCTTTCTGTGTG	NA	False	NA	-14	True	NA	NA	NA	62389131	62371980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.31	chr4	-	1360	11	NNC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	0	-115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.2906294543356	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGGTCCCTCTTTCT	NA	False	NA	-19	True	NA	NA	NA	62389133	62371985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62372175_62374047_62374211_62375676_62375807_62377014_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.32	chr4	-	1432	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	1117	0	-115	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGGTCCCTCTTTCT	NA	False	NA	-19	True	NA	NA	NA	62389124	62371985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ES.23544.33	chr4	-	4023	9	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	0	-117	intron_retention	FALSE	canonical	3	163	junction_6	15.6664450338933	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACCATGGTCCCTCTTT	NA	False	NA	-21	True	NA	NA	NA	62389124	62371987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.4	chr4	-	2498	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	2	212	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATTAACATGTATCA	NA	False	NA	NA	False	TTTAAA	-17	NA	62389131	62370656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.5	chr4	-	2496	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-23	-1033	-14	31	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389147	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ES.23544.6	chr4	-	2196	9	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	1	31	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	63.3560129348431	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389123	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62387073_62387171_62389055
ES.23544.7	chr4	-	2786	11	NNC	ENSMUSG00000028391.17	novel	1437	11	NA	NA	1	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.0369391915333	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389123	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381711_62382163_62382307_62387073_62387171_62388738
ES.23544.8	chr4	-	2558	11	NIC	ENSMUSG00000028391.17	novel	2549	11	NA	NA	1	31	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	58.0241329103676	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62389123	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388969
ES.23544.9	chr4	-	4183	1	NIC	ENSMUSG00000028391.17	novel	2128	10	NA	NA	2490	31	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTTAGGCCTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	62375020	62370837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62370800_62375000
ES.23545.1	chr4	-	169	1	Intergenic	novelGene_19323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	62397406	62397237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62397200_62397400
ES.23546.1	chr4	-	224	1	Intergenic	novelGene_19324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62398126	62397902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62397900_62398100
ES.23547.1	chr4	+	1082	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	-6	1091	-6	-1091	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGGGTGTGGCCTCA	9550	False	NA	NA	False	NA	NA	NA	62398283	62414444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
ES.23547.2	chr4	+	1722	7	FSM	ENSMUSG00000028392.16	ENSMUST00000030088.12	1757	7	11	24	11	-24	multi-exon	FALSE	canonical	3	6	junction_6	6.83130051063973	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGGTTTCTAAAGACT	9567	False	NA	4	True	AATAAA	-15	NA	62398300	62415511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234_62414809_62415218
ES.23547.3	chr4	+	2113	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	31	23	-5	-23	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGTTTCTAAAGACTT	9587	False	NA	5	True	AATAAA	-16	NA	62398320	62415512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
ES.23548.1	chr4	-	1130	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	12	63	12	-63	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATCTGAGCATAGAA	NA	False	NA	NA	False	NA	NA	NA	62420501	62417307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62418331_62420394
ES.23549.1	chr4	-	5334	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-5	-4123	-5	4123	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATGCCTGCTGTGAT	NA	False	NA	NA	False	AATAAA	-35	NA	62438160	62423282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ES.23549.10	chr4	-	2361	10	NIC	ENSMUSG00000028393.11	novel	1769	11	NA	NA	8	-1	intron_retention	FALSE	canonical	3	554	junction_1	38.715486421959	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGTGCCCTCTTCCTG	NA	False	NA	-2	True	AGTAAA	-17	NA	62438147	62427406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429850_62429938_62430023_62430123_62430260_62431107_62431820_62432310_62432498_62438096
ES.23549.11	chr4	-	2248	10	NIC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	7	-6	intron_retention	FALSE	canonical	3	554	junction_1	44.2844341852881	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCCTGTGCCCTCT	NA	False	NA	-7	True	AGTAAA	-12	NA	62438148	62427411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62432498_62438096
ES.23549.12	chr4	-	5336	1	Genic_Genomic	ENSMUSG00000028393.11	novel	NA	NA	NA	NA	-15	-5429	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGACTCCCTCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	62438170	62432834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_62432800_62438200
ES.23549.2	chr4	-	1920	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-12	-702	-12	702	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTCCACTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	62438167	62426703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ES.23549.3	chr4	-	1446	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	-238	-2	-238	2	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTCTTCCTGCCC	NA	False	NA	1	True	AGTAAA	-20	NA	62438393	62427403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ES.23549.4	chr4	-	1242	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	191.770136162978	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438169	62427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430045_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ES.23549.5	chr4	-	2496	12	NNC	ENSMUSG00000028393.11	novel	1247	12	NA	NA	4030	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	193.249720686615	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	642	False	NA	-1	True	AGTAAA	-18	NA	62434088	62427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432740_62432981
ES.23549.6	chr4	-	1287	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-119	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	192.799643358951	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438274	62427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432348_62432498_62438096
ES.23549.7	chr4	-	2013	9	NIC	ENSMUSG00000028393.11	novel	1769	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	554	junction_1	43.073882748134	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438169	62427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62427548_62428341_62428472_62428751_62429019_62429104_62429850_62429938_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ES.23549.9	chr4	-	1227	12	NNC	ENSMUSG00000028393.11	novel	1206	12	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	190.042622448511	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTGTGCCCTCTTCCTG	NA	False	NA	-2	True	AGTAAA	-17	NA	62438170	62427406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431761_62431820_62432310_62432498_62438096
ES.2355.1	chr10	+	7370	1	Antisense	novelGene_ENSMUSG00000019809.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13417748	13425118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13417700_13425100
ES.2355.2	chr10	+	5869	2	Antisense	novelGene_ENSMUSG00000019809.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCTTCCTCTTCATC	NA	False	NA	NA	False	NA	NA	NA	13417748	13427261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13418452_13422095
ES.23550.2	chr4	-	2027	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	-229	7	-229	-7	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATGACTCATACAAT	NA	False	NA	-6	True	AATAAA	-15	NA	62443534	62440892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ES.23550.4	chr4	-	2392	1	NIC	ENSMUSG00000028394.10	novel	1805	4	NA	NA	-9	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATGACTCATACAAT	NA	False	NA	-6	True	AATAAA	-15	NA	62443284	62440892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_62440900_62443300
ES.23550.5	chr4	-	1916	4	FSM	ENSMUSG00000028394.10	ENSMUST00000128100.2	1945	4	21	8	-9	-8	multi-exon	FALSE	canonical	0	0	junction_2	150.086641644085	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGATGACTCATACAA	NA	False	NA	-7	True	AATAAA	-14	NA	62443284	62440893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62442348_62442554_62442674_62442846_62443073_62443167
ES.23550.6	chr4	-	649	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	2	1154	2	532	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAACTCTTCCCAGGC	NA	False	NA	-12	True	AATAAA	-18	NA	62443303	62442039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ES.23551.1	chr4	-	163	1	Intergenic	novelGene_19325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATGAATTAAGAATTG	NA	False	NA	NA	False	NA	NA	NA	62472200	62472037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62472000_62472200
ES.23552.1	chr4	+	204	1	Intergenic	novelGene_19326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62472842	62473046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62472800_62473000
ES.23553.1	chr4	+	4684	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-204	-2408	-204	7	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGTCATCAAGACCCT	NA	False	NA	NA	False	NA	NA	NA	62501633	62578084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.10	chr4	+	2459	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-95	-292	-95	292	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAAGGGTCTGTACAG	NA	False	NA	NA	False	AATAAA	-21	NA	62501742	62575968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.11	chr4	+	4353	23	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.9940590349787	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	62501745	62621252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544818_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.13	chr4	+	4436	17	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.3901991349235	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCCGACTCCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	62501745	62578075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533022_62533084_62533537_62533599_62534710_62534802_62535311_62535368_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.14	chr4	+	5031	2	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-91	-33688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTGTGAAACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	62501746	62508465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62504175_62505862
ES.23553.16	chr4	+	4666	23	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-90	-2	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	17.2868363428304	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCTCTGTGTATTCCTG	NA	False	NA	-1	True	AATAAA	-19	NA	62501747	62621253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.17	chr4	+	3751	12	ISM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-84	28416	-84	-2297	5prime_fragment	FALSE	canonical	3	65	junction_5	11.0326337863841	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAACTTGGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62501753	62547260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728
ES.23553.19	chr4	+	5007	2	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-79	-33706	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62501758	62508447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62504174_62505855
ES.23553.2	chr4	+	4392	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-177	0	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	False	NA	1	True	AATAAA	-21	NA	62501660	62621255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.20	chr4	+	4585	9	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-76	-2297	intron_retention	FALSE	canonical	0	0	junction_3	28.2300814734921	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAACTTGGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62501761	62547260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333
ES.23553.21	chr4	+	4351	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-72	-2207	-72	-194	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTTCTGGGATCCCATTT	NA	False	NA	NA	False	AATACA	-23	NA	62501765	62577883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.22	chr4	+	4449	18	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-69	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	25.8923777377338	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTATTTGTACATGTCT	NA	False	NA	NA	False	NA	NA	NA	62501768	62578014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570953_62571074_62575366
ES.23553.23	chr4	+	4812	22	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-63	-5	intron_retention	FALSE	canonical	2	39	junction_17	14.5295070791723	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGTCTCTGTGTATTC	NA	False	NA	-4	True	AATAAA	-16	NA	62501774	62621250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.24	chr4	+	3323	18	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-34	770	combination_of_known_junctions	FALSE	canonical	3	54	junction_17	12.0428876050768	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTCCGTAACCTGAGTA	NA	False	NA	NA	False	NA	NA	NA	62501803	62609289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735
ES.23553.25	chr4	+	3970	3	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-579	-14987	intron_retention	TRUE	non_canonical	0	0	junction_2	35	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATCTTCTTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	62522116	62527166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62524839_62525845_62526574_62526646
ES.23553.26	chr4	+	5538	4	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-4429	-2298	intron_retention	FALSE	canonical	3	70	junction_2	4.02768199119819	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAACTTGGAAAAAGAA	7707	False	NA	NA	False	NA	NA	NA	62533327	62547259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62534802_62535311_62535368_62542081_62542164_62543333
ES.23553.27	chr4	+	3458	14	NNC	ENSMUSG00000059810.19	novel	2911	10	NA	NA	-3002	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4708309946558	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGTCTCTGTGTATTC	9134	False	NA	-4	True	AATAAA	-16	NA	62534754	62621250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62534802_62543994_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.28	chr4	+	4318	15	NIC	ENSMUSG00000059810.19	novel	3888	16	NA	NA	44	-3	intron_retention	FALSE	canonical	0	0	junction_1	18.8875566423603	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	62537862	62621252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62538025_62542081_62542164_62543333_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.29	chr4	+	4052	11	NNC	ENSMUSG00000059810.19	novel	2911	10	NA	NA	-1549	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7307500897162	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCCGACTCCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	62540218	62578075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62540395_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.3	chr4	+	4331	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-144	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	19.983464238595	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	62501693	62621252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543415_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.30	chr4	+	6240	1	NIC	ENSMUSG00000059810.19	novel	4698	20	NA	NA	-776	-2326	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-30	NA	62540991	62547231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62541000_62547200
ES.23553.31	chr4	+	3277	6	NNC	ENSMUSG00000059810.19	novel	2217	6	NA	NA	-398	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8093509453205	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCCGACTCCTGTCAT	8889	False	NA	NA	False	NA	NA	NA	62552216	62578075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62552395_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.32	chr4	+	3715	4	ISM	ENSMUSG00000059810.19	ENSMUST00000107424.2	4084	11	20438	-1	5642	1	3prime_fragment	FALSE	canonical	3	19	junction_3	18.1903515328563	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGACTCCTGTCATCAA	NA	False	NA	NA	False	NA	NA	NA	62558256	62578078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.33	chr4	+	2642	7	NIC	ENSMUSG00000059810.19	novel	496	2	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9071680247511	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	62581864	62621252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62582030_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.34	chr4	+	2740	8	NNC	ENSMUSG00000059810.19	novel	916	2	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.0434269051744	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	3548	False	NA	-2	True	AATAAA	-18	NA	62587124	62621252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62587261_62607735_62608864_62608988_62609116_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.35	chr4	+	2802	7	FSM	ENSMUSG00000059810.19	ENSMUST00000107420.8	2752	7	-55	5	-55	-5	multi-exon	FALSE	canonical	1	1	junction_1	19.9916649298318	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGTCTCTGTGTATTC	8644	False	NA	-4	True	AATAAA	-16	NA	62592220	62621250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_62592548_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.5	chr4	+	613	5	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-133	-16509	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	32.2286751201473	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTTCTGGCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	62501704	62525644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525482
ES.23553.6	chr4	+	4224	22	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-132	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	19.9800353868294	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	False	NA	1	True	AATAAA	-21	NA	62501705	62621255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.7	chr4	+	4200	13	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-131	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.1888383111837	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGATTCTTATTTGTAC	NA	False	NA	NA	False	NA	NA	NA	62501706	62578008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_62501951_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ES.23553.8	chr4	+	4601	24	NNC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-129	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.7556329422402	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTGTATTCCTGGTC	NA	False	NA	2	True	AATAAA	-22	NA	62501708	62621256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544818_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62565677_62565885_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ES.23553.9	chr4	+	1339	10	ISM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-120	31801	-120	-893	5prime_fragment	FALSE	canonical	3	65	junction_5	11.4352714046832	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCCTGCCTGGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	62501717	62543875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333
ES.23554.1	chr4	-	1481	14	Intergenic	novelGene_19327	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCGGGGCCCGGCCGCTC	NA	False	NA	NA	False	NA	NA	NA	62552704	62501750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62501950_62521156_62521209_62523724_62523780_62524739_62524839_62525845_62525911_62533533_62533597_62534708_62534800_62535309_62535366_62542079_62542161_62543330_62543439_62543977_62544328_62544725_62544767_62549358_62549555_62552679
ES.23554.2	chr4	-	4120	2	Antisense	novelGene_ENSMUSG00000059810.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	9684	False	NA	NA	False	NA	NA	NA	62515374	62511059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_62512057_62512251
ES.23555.1	chr4	-	2257	1	Antisense	novelGene_ENSMUSG00000059810.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAAGTCGTTGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	62580014	62577757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_62577800_62580000
ES.23556.1	chr4	+	174	1	Intergenic	novelGene_19328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62800348	62800522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_62800300_62800500
ES.23557.1	chr4	+	3202	17	NNC	ENSMUSG00000028358.16	novel	8826	15	NA	NA	-8	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.75	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGTGGAACCTCATT	4103	False	NA	NA	False	AAGAAA	-11	NA	62883801	63052179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62883944_62952138_62952231_62979757_62979802_62998076_62998334_63004767_63004864_63007602_63007681_63008241_63008281_63012668_63012759_63013584_63013621_63013713_63013792_63021750_63021841_63033437_63033678_63036785_63036867_63038637_63038683_63039567_63039646_63049344_63049447_63050565
ES.23557.2	chr4	+	7399	14	NNC	ENSMUSG00000028358.16	novel	8826	15	NA	NA	-58883	-52	intron_retention	FALSE	canonical	0	0	junction_3	0.72160242458822	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAAGTGCTTTTTTTTC	57	False	NA	NA	False	NA	NA	NA	62979753	63052215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_62979802_62998076_62998334_63004767_63004864_63007602_63007681_63008241_63012759_63013584_63013621_63013713_63013792_63021750_63021841_63033437_63033678_63036782_63036867_63038637_63038683_63039567_63039646_63049344_63049447_63050565
ES.23557.3	chr4	+	6391	1	ISM	ENSMUSG00000028358.16	ENSMUST00000107415.8	8826	15	167745	0	12918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGTGTGTGATGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	63051554	63057945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_63051600_63057900
ES.23558.1	chr4	-	199	1	Intergenic	novelGene_19329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTCCAAGCCAACAGA	NA	False	NA	NA	False	NA	NA	NA	62901556	62901357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_62901400_62901600
ES.23559.1	chr4	+	175	1	Intergenic	novelGene_19330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATGAGACACTGATC	6191	False	NA	NA	False	NA	NA	NA	63093161	63093336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_63093200_63093300
ES.2356.1	chr10	+	880	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	265	321	265	-321	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAAAGACTATTTCCA	NA	False	NA	53	True	TTTAAA	-39	NA	13428902	13438799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ES.2356.10	chr10	+	2419	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	366	-1319	366	1319	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTACTCTTTTCAAATG	NA	False	NA	NA	False	CATAAA	-28	NA	13429003	13440439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ES.2356.11	chr10	+	5888	7	NNC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	367	3895	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	334.975952702412	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACTAAGTACTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	13429004	13443015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13429106_13432595_13432701_13435857_13436980_13437428_13437555_13438380_13438454_13438558_13442683_13442778
ES.2356.2	chr10	+	1819	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	292	-645	292	645	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGAGTCGTTTTTA	NA	False	NA	8	True	TATAAA	-3	NA	13428929	13439765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ES.2356.3	chr10	+	4965	7	NNC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	307	3902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	336.597063762198	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTACTTTCATTCTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	13428944	13443022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558_13442683_13442778
ES.2356.5	chr10	+	938	8	NNC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	340	-362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	329.388982877109	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTGGCAATGTAA	NA	False	NA	12	True	NA	NA	NA	13428977	13438758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13429106_13430899_13431026_13432405_13432454_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ES.2356.8	chr10	+	2201	5	NIC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	360	-344	intron_retention	FALSE	canonical	3	637	junction_3	67.9977021670586	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACCGTGAGCTCTTCC	NA	False	NA	30	True	TTTAAA	-16	NA	13428997	13438776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13429106_13432595_13432701_13435857_13437555_13438380_13438454_13438558
ES.2356.9	chr10	+	2007	7	NNC	ENSMUSG00000019808.9	novel	1466	6	NA	NA	362	5260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	336.597063762198	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGTGCTACACATGCA	NA	False	NA	NA	False	NA	NA	NA	13428999	13444380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558_13438989_13443345
ES.23560.1	chr4	+	7481	60	NNC	ENSMUSG00000045672.16	novel	7612	61	NA	NA	129	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.33371631002753	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACGAGTCTGTGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	63133800	63253224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63134119_63139252_63139324_63142440_63144177_63150028_63150083_63153566_63153621_63162231_63162286_63163305_63163360_63171880_63171926_63172525_63172580_63172933_63172979_63175296_63175351_63176388_63176434_63181955_63182010_63183871_63183917_63190757_63190812_63191303_63191349_63194164_63194219_63195349_63195404_63196024_63196079_63199297_63199352_63199480_63199535_63200885_63200931_63202145_63202200_63204842_63204888_63209759_63209814_63211437_63211492_63211706_63211761_63216047_63216102_63218917_63218972_63219396_63219442_63219529_63219575_63219794_63219849_63220604_63220659_63221270_63221325_63223421_63223476_63224922_63224977_63227758_63227867_63231662_63231717_63231870_63231979_63232909_63232964_63233798_63233853_63235564_63235622_63235723_63235778_63236220_63236275_63236498_63236553_63237157_63237212_63237286_63237395_63237686_63237795_63239666_63239775_63241684_63241739_63242155_63242219_63242667_63242722_63242867_63242921_63243412_63243449_63244360_63244388_63246066_63246133_63246768_63246941_63248034_63248145_63249518_63249738_63251398
ES.23560.2	chr4	+	5756	56	NNC	ENSMUSG00000045672.16	novel	7612	61	NA	NA	10792	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.44816783649017	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGAGCAATGGAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	63163314	63253210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63163360_63171880_63171926_63172525_63172576_63172933_63172979_63175296_63175351_63176388_63176434_63181955_63182010_63183871_63183917_63190757_63190812_63191303_63191349_63194164_63194219_63195349_63195404_63196024_63196079_63199297_63199352_63199480_63199535_63200885_63200931_63202145_63202200_63204842_63204888_63209759_63209814_63210133_63210341_63211437_63211499_63211706_63211761_63216047_63216294_63218719_63218836_63218917_63218972_63219396_63219442_63219529_63219575_63219794_63219849_63220604_63220659_63221270_63221325_63223421_63223476_63224922_63224977_63227758_63227867_63231662_63231717_63231870_63231979_63232909_63232964_63233798_63233853_63235564_63235622_63235723_63235778_63236220_63236275_63236428_63236553_63237157_63237212_63237286_63237395_63237686_63237795_63239666_63239775_63241684_63241739_63242155_63242219_63242667_63242722_63242867_63242921_63243412_63243449_63244360_63244388_63246066_63246133_63246771_63246941_63248034_63248145_63249518_63249738_63251398
ES.23560.3	chr4	+	4187	51	NNC	ENSMUSG00000045672.16	novel	7612	61	NA	NA	20430	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.33401649165218	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	63172952	63252400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63172979_63175296_63175351_63176388_63176426_63181955_63182010_63183871_63183917_63190757_63190812_63191303_63191349_63194164_63194219_63195349_63195404_63196024_63196079_63199297_63199352_63199480_63199535_63200885_63200931_63202145_63202200_63204842_63204888_63209759_63209814_63211437_63211492_63211706_63211761_63216047_63216102_63218917_63218972_63219396_63219442_63219529_63219575_63219794_63219849_63220604_63220659_63221270_63221325_63223421_63223476_63224922_63224977_63227758_63227867_63231662_63231717_63231870_63231979_63232909_63232964_63233798_63233853_63235564_63235622_63235723_63235778_63236220_63236275_63236498_63236553_63237157_63237212_63237286_63237395_63237686_63237795_63239666_63239775_63241684_63241739_63242155_63242219_63242667_63242722_63242867_63242921_63243412_63243449_63244360_63244388_63246066_63246133_63246771_63246941_63248034_63248145_63249518_63249738_63251398
ES.23560.4	chr4	+	4196	50	NNC	ENSMUSG00000045672.16	novel	7612	61	NA	NA	22773	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.31565399683969	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAAAAATCCTCCT	NA	False	NA	NA	False	NA	NA	NA	63175295	63252423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63175351_63176388_63176434_63181955_63182010_63183871_63183917_63190757_63190812_63191303_63191349_63194164_63194219_63195349_63195404_63196024_63196079_63199297_63199352_63199480_63199535_63200885_63200931_63202145_63202200_63204842_63204888_63209759_63209814_63211437_63211492_63211706_63211761_63216047_63216102_63218917_63218972_63219396_63219442_63219529_63219575_63219794_63219849_63220604_63220659_63221270_63221325_63223421_63223476_63224922_63224977_63227758_63227867_63231662_63231717_63231870_63231979_63232909_63232964_63233798_63233853_63235564_63235622_63235723_63235778_63236220_63236275_63236498_63236553_63237157_63237212_63237286_63237395_63237686_63237795_63239666_63239775_63241684_63241739_63242155_63242219_63242667_63242722_63242867_63242921_63243412_63243449_63244360_63244388_63246066_63246133_63246768_63246941_63248034_63248145_63249518_63249738_63251398
ES.23561.1	chr4	-	5273	23	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7335	17676	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.795520231031	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTGCTGTGTATCC	NA	False	NA	NA	False	AAGAAA	-42	NA	63328926	63267685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.10	chr4	-	2741	12	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	1151	6385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.3918947921231	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTAGATATCCCCAAAG	NA	False	NA	NA	False	TATAAA	-33	NA	63298289	63278976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63279018_63285425_63286524_63288708_63288890_63289128_63289249_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124
ES.23561.11	chr4	-	5336	23	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7359	6385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.5242032256108	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTAGATATCCCCAAAG	NA	False	NA	NA	False	TATAAA	-33	NA	63328950	63278976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63279017_63285425_63286524_63288708_63288890_63289066_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.12	chr4	-	1766	7	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	7116	6379	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.9192269683564	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGATTAGATATCC	NA	False	NA	NA	False	TATAAA	-27	NA	63292324	63278982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63278991_63285400_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233
ES.23561.13	chr4	-	4817	20	ISM	ENSMUSG00000039158.12	ENSMUST00000035724.5	5387	22	8482	-693	8482	693	3prime_fragment	FALSE	canonical	3	30	junction_5	7.93533421387358	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTTTGCCACCGAGTG	NA	False	NA	NA	False	NA	NA	NA	63313109	63284668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822
ES.23561.14	chr4	-	5280	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7341	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGGCTGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	63328932	63285361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.15	chr4	-	5207	21	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7364	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	10.4808158079417	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGGCTGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	63328955	63285361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.16	chr4	-	5595	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7333	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.8727024750569	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTGTGGCTGTGC	NA	False	NA	NA	False	AATAAA	-33	NA	63328924	63285366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300163_63300575_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328575
ES.23561.17	chr4	-	5203	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7364	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.070841537337	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAAAGCTACCTGTGGC	NA	False	NA	NA	False	AATAAA	-28	NA	63328955	63285371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288798_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.18	chr4	-	3870	20	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7355	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	11.8781906341994	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAAAGCTACCTGTGGC	NA	False	NA	NA	False	AATAAA	-28	NA	63328946	63285371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63328903
ES.23561.2	chr4	-	8025	20	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7307	17674	intron_retention	FALSE	non_canonical	0	0	junction_1	15.5337181283802	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGTGCTGTGTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	63328898	63267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328575
ES.23561.21	chr4	-	5038	20	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7337	-22	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	11.3657404247001	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGGCAAAGAAATCCCCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	63328928	63285383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.22	chr4	-	5535	21	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7341	-530	intron_retention	FALSE	canonical	3	30	junction_4	7.74854825112421	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTTGGACACTGCCT	NA	False	NA	NA	False	AAGAAA	-16	NA	63328932	63285891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.23	chr4	-	4893	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7332	-616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8641619561143	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATGTCTTTACACTGG	NA	False	NA	NA	False	NA	NA	NA	63328923	63285977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288798_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328575
ES.23561.24	chr4	-	4608	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7375	-706	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTCTGTCGAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	63328966	63286067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.25	chr4	-	4575	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7339	-765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.0539226874157	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCAGGAGTGGATGAATG	NA	False	NA	NA	False	TTTAAA	-18	NA	63328930	63286126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289066_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.26	chr4	-	4714	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7213	-766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	11.9996220650992	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTCAGGAGTGGATGAAT	NA	False	NA	NA	False	TTTAAA	-17	NA	63328804	63286127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328575
ES.23561.27	chr4	-	4383	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7395	-951	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCTGCGAGGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	63328986	63286312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.3	chr4	-	5173	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7333	17674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.5803646436639	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGTGCTGTGTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	63328924	63267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63288890_63289128_63289249_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.4	chr4	-	5053	21	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7333	17674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.3194797391525	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGTGCTGTGTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	63328924	63267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63288890_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.5	chr4	-	5607	23	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7343	17674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5338021508027	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGTGCTGTGTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	63328934	63267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328575
ES.23561.6	chr4	-	5930	24	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7389	17674	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.7869134791653	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGTGCTGTGTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	63328980	63267687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267708_63285383_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300163_63300575_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63327855_63328132_63328575
ES.23561.7	chr4	-	5299	23	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7365	17672	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.795520231031	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTCTGTGTGCTGTGT	NA	False	NA	NA	False	AAGAAA	-38	NA	63328956	63267689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267721_63285397_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23561.8	chr4	-	6091	21	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	5112	17671	intron_retention	FALSE	non_canonical	0	0	junction_1	17.2826502597258	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTCTGTGTGCTGTG	NA	False	NA	NA	False	AAGAAA	-37	NA	63316479	63267690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63267741_63285417_63286524_63288708_63288890_63289128_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295287_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298328_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111
ES.23561.9	chr4	-	5280	23	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7365	6385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.795520231031	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTAGATATCCCCAAAG	NA	False	NA	NA	False	TATAAA	-33	NA	63328956	63278976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63279017_63285425_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
ES.23562.1	chr4	+	5159	1	Intergenic	novelGene_19331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTCACTCACAGGCTGC	2767	False	NA	NA	False	NA	NA	NA	63365796	63370955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_63365800_63371000
ES.23563.1	chr4	-	4139	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	-119	-4	-79	4	multi-exon	FALSE	canonical	3	12	junction_3	10.7826000023147	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTCTATGCTGTTG	4399	False	NA	-3	True	AATAAA	-22	NA	63414307	63333142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.10	chr4	-	3001	12	NNC	ENSMUSG00000039137.19	novel	4013	12	NA	NA	-159	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.6502959129975	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGGGCCAGTGTTCTA	5551	False	NA	-11	True	AATAAA	-14	NA	63413155	63333150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63350061_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.11	chr4	-	3348	9	NNC	ENSMUSG00000039137.19	novel	2665	9	NA	NA	-597	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.779030568655	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGGGGCCAGTGTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	63352156	63333151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63347322_63347356_63347471_63347658_63350086_63350297_63350901
ES.23563.12	chr4	-	4559	5	ISM	ENSMUSG00000039137.19	ENSMUST00000155058.8	2537	7	10933	6	9540	-6	3prime_fragment	FALSE	canonical	3	12	junction_3	6.64736790015417	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGGGGGCCAGTGTTC	3763	False	NA	-13	True	AATAAA	-12	NA	63340626	63333152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658
ES.23563.14	chr4	-	4481	14	NNC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-51	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.9306930875126	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGGGGGCCAGTGTT	4427	False	NA	-14	True	AATAAA	-11	NA	63414279	63333153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63347322_63347356_63347471_63347655_63350086_63350297_63350748_63351115_63352346_63352384_63353584_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.15	chr4	-	4309	14	NNC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-45	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	13.6840943386774	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGGGGGCCAGTGT	4433	False	NA	-15	True	AATAAA	-10	NA	63414273	63333154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63347322_63347356_63347471_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.17	chr4	-	3587	9	NNC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	23	-2327	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1739909054935	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGACAGCAGGGATA	4541	False	NA	NA	False	AATAAA	-21	NA	63414165	63346275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63347356_63347471_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.18	chr4	-	2097	9	NNC	ENSMUSG00000039137.19	novel	2804	7	NA	NA	-588	-2329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.2538456987877	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGAGGACAGCAGGGA	5122	False	NA	NA	False	AATAAA	-19	NA	63413584	63346277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63346599_63347322_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.19	chr4	-	3797	8	NIC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-33	-2329	intron_retention	FALSE	canonical	3	8	junction_1	13.0039240545432	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGAGGACAGCAGGGA	4445	False	NA	NA	False	AATAAA	-19	NA	63414261	63346277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.2	chr4	-	5943	10	NIC	ENSMUSG00000039137.19	novel	4016	12	NA	NA	-48	2	intron_retention	FALSE	canonical	3	12	junction_3	11.7515431085496	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGTGTTCTATGCTGT	4430	False	NA	-5	True	AATAAA	-20	NA	63414276	63333144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.20	chr4	-	3541	8	ISM	ENSMUSG00000039137.19	ENSMUST00000084510.8	4049	13	-117	13132	-77	-2330	5prime_fragment	FALSE	canonical	3	5	junction_1	13.763305250868	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAGAGGACAGCAGGG	4401	False	NA	NA	False	AATAAA	-18	NA	63414305	63346278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.21	chr4	-	2835	9	NNC	ENSMUSG00000039137.19	novel	2804	7	NA	NA	-67	-2334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.2538456987877	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAATTCAGAGGACAGC	4411	False	NA	NA	False	AATAAA	-14	NA	63414295	63346282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63346631_63347322_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.22	chr4	-	2899	7	FSM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-90	-5	-90	5	multi-exon	FALSE	canonical	3	23	junction_2	9.97357620025145	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAACTCCATAATTGCAG	4388	False	NA	NA	False	AATAAA	-24	NA	63414318	63349664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.23	chr4	-	2552	4	ISM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	-69	3371	-69	-3	5prime_fragment	FALSE	canonical	3	35	junction_2	7.71722460186015	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGTTTCTGGTTGTTT	4409	False	NA	NA	False	TTTAAA	-40	NA	63414297	63353040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.24	chr4	-	2404	5	NNC	ENSMUSG00000039137.19	novel	590	3	NA	NA	-50	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4332342741746	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCCCGGCAGCGTGTA	4428	False	NA	NA	False	AATAAA	-12	NA	63414278	63354469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63354839_63355712_63355974_63379518_63379645_63390886_63391106_63412849
ES.23563.25	chr4	-	2318	6	NNC	ENSMUSG00000039137.19	novel	797	4	NA	NA	-50	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.4254742906989	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTCACTGGGTGTCTC	4428	False	NA	NA	False	AATAAA	-24	NA	63414278	63378390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63378705_63379518_63379645_63382207_63382299_63382478_63382618_63390886_63391106_63412849
ES.23563.26	chr4	-	2062	4	FSM	ENSMUSG00000039137.19	ENSMUST00000133425.2	797	4	-1266	1	-34	-1	multi-exon	FALSE	canonical	3	16	junction_1	15.1070255914995	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGTGTAATGAAACTCAC	4444	False	NA	NA	False	AATAAA	-14	NA	63414262	63378400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_63378705_63379518_63379645_63390886_63391106_63412849
ES.23563.27	chr4	-	4606	3	NNC	ENSMUSG00000039137.19	novel	2741	12	NA	NA	-74	-7515	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTTCTTTGTGG	4404	False	NA	NA	False	NA	NA	NA	63414302	63386571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63389506_63390886_63391106_63412849
ES.23563.28	chr4	-	4819	3	NNC	ENSMUSG00000039137.19	novel	2741	12	NA	NA	-73	-7516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTTTTCTTTGTG	4405	False	NA	NA	False	NA	NA	NA	63414301	63386572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63389721_63390886_63391106_63412849
ES.23563.29	chr4	-	2379	3	NNC	ENSMUSG00000039137.19	novel	2741	12	NA	NA	-74	-9742	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	25.5	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTGTGTTCTTTGCT	4404	False	NA	NA	False	NA	NA	NA	63414302	63388798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63389506_63390886_63391106_63412849
ES.23563.3	chr4	-	5355	11	NIC	ENSMUSG00000039137.19	novel	4016	12	NA	NA	-69	-2	intron_retention	FALSE	canonical	3	12	junction_3	11.1821285987955	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	4409	False	NA	-9	True	AATAAA	-16	NA	63414297	63333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.30	chr4	-	1623	1	Genic_Genomic	ENSMUSG00000039137.19	novel	NA	NA	NA	NA	-221	-31379	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAAAGTGTTGGAGC	6648	False	NA	NA	False	AATAAA	-5	NA	63412058	63410435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_63410400_63412100
ES.23563.4	chr4	-	3265	8	ISM	ENSMUSG00000039137.19	ENSMUST00000124016.8	2741	12	58316	2	-1962	-2	3prime_fragment	FALSE	canonical	3	12	junction_3	5.59153879736598	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	NA	False	NA	-9	True	AATAAA	-16	NA	63353521	63333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346
ES.23563.5	chr4	-	2588	12	NNC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-2189	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.5135565083546	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	NA	False	NA	-9	True	AATAAA	-16	NA	63353748	63333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63339871_63339963_63347322_63347356_63347469_63347655_63350086_63350297_63350901_63351115_63352346_63352384_63353596
ES.23563.6	chr4	-	4153	13	NIC	ENSMUSG00000039137.19	novel	4049	13	NA	NA	-69	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	13.5428845606179	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	4409	False	NA	-9	True	AATAAA	-16	NA	63414297	63333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63347322_63347356_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ES.23563.8	chr4	-	4300	6	NIC	ENSMUSG00000039137.19	novel	2537	7	NA	NA	-271	-2	intron_retention	FALSE	canonical	3	17	junction_4	4.58693797647189	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGCCAGTGTTCTATG	NA	False	NA	-9	True	AATAAA	-16	NA	63351830	63333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63333904_63334238_63334362_63334648_63336860_63337658_63337731_63350086_63350297_63350901
ES.23563.9	chr4	-	7551	4	NIC	ENSMUSG00000039137.19	novel	2537	7	NA	NA	6886	-3	intron_retention	FALSE	canonical	3	12	junction_2	7.36357401145817	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGGGCCAGTGTTCTAT	1109	False	NA	-10	True	AATAAA	-15	NA	63343280	63333149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_63334362_63334648_63334831_63336324_63336860_63337658
ES.23564.1	chr4	+	1127	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	-39	47	-39	-47	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCCTTTTTTTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	63462969	63468940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23564.10	chr4	+	1134	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	80	-79	80	79	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGAATGAAGTTGCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	63463088	63469066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23564.11	chr4	+	521	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	90	-518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2124.5	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGGACCCTTCACTTTT	NA	False	NA	38	True	ATTAAA	-17	NA	63463098	63468469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63463231_63466821_63466923_63468181
ES.23564.2	chr4	+	694	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	4	437	4	-437	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTGTGTCTTTAAGGA	NA	False	NA	119	True	NA	NA	NA	63463012	63468550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23564.3	chr4	+	2087	4	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	37	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2002.99780884109	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCCTGGCTCCTTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	63463045	63468937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63464176_63464253_63464354_63466821_63466923_63468181
ES.23564.4	chr4	+	3410	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	59	-2334	59	2334	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTTGATACAAGTTG	NA	False	NA	NA	False	AATACA	-14	NA	63463067	63471321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23564.5	chr4	+	2178	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	62	-1105	62	1105	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTCTCTGTACAGCT	NA	False	NA	NA	False	NA	NA	NA	63463070	63470092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23564.6	chr4	+	2278	2	ISM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	66	50	66	-50	intron_retention	FALSE	canonical	3	4294	junction_1	0	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCCTGGCTCCTTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	63463074	63468937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_63463237_63466821
ES.23564.7	chr4	+	962	4	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	72	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2013.68821375659	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCCTGGCTCCTTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	63463080	63468937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63463237_63466821_63466923_63468181_63468359_63468409
ES.23564.8	chr4	+	4134	2	NIC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	72	-514	intron_retention	FALSE	canonical	3	4249	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCTTCACTTTTTGAG	NA	False	NA	42	True	ATTAAA	-21	NA	63463080	63468473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63466923_63468181
ES.23564.9	chr4	+	3730	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	73	-2668	73	2668	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCTCATTTACATTTC	NA	False	NA	NA	False	AGTAAA	-19	NA	63463081	63471655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63463237_63466821_63466923_63468181
ES.23565.1	chr4	-	2888	1	Intergenic	novelGene_19332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCCAGACTAGTTG	NA	False	NA	NA	False	NA	NA	NA	63475289	63472401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_63472400_63475300
ES.23566.1	chr4	+	3825	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-286	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAAGGGACCATGTTGT	NA	False	NA	20	True	AATAAA	-20	NA	63476731	63504596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.10	chr4	+	3921	7	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	1	-1535	intron_retention	FALSE	canonical	0	0	junction_3	29.4207976325139	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATATGTATTCATTCC	NA	False	NA	NA	False	NA	NA	NA	63477018	63503055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63479233_63480676_63480869_63483893_63484004_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.12	chr4	+	3796	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGGGACCATGTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	63477019	63504597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.13	chr4	+	4037	9	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	52	junction_1	10.5118980208143	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477024	63504594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498710_63502022
ES.23566.14	chr4	+	1552	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	24.114439094441	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	16	True	AATAAA	-16	NA	63477025	63504592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63504225
ES.23566.15	chr4	+	2243	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	9	-1539	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGCATATGTATTCA	NA	False	NA	NA	False	NA	NA	NA	63477026	63503051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.16	chr4	+	1615	7	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	10	-635	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	29.1685713663792	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTTGCTCGTGGAGGC	NA	False	NA	9	True	AATAAA	-20	NA	63477027	63503955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488307_63503127
ES.23566.17	chr4	+	3295	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	38	432	-37	-428	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTCTCTGCACGTGAGT	NA	False	NA	NA	False	NA	NA	NA	63477055	63504162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.18	chr4	+	3459	8	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	27.4002830314594	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTAGTAAGGGACCA	NA	False	NA	14	True	AATAAA	-14	NA	63477061	63504590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.19	chr4	+	1535	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	29.7450068431454	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTAGTAAGGGACCA	NA	False	NA	14	True	AATAAA	-14	NA	63477070	63504590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63504225
ES.23566.2	chr4	+	3140	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-242	-635	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTTGCTCGTGGAGGC	NA	False	NA	9	True	AATAAA	-20	NA	63476775	63503955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.20	chr4	+	4172	11	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.3450146198798	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	16	True	AATAAA	-16	NA	63477074	63504592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63479148_63479233_63480676_63480869_63483850_63484004_63486697_63486806_63488161_63488331_63489870_63490275_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.21	chr4	+	2172	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	59	1534	-16	-1530	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTATTCATTCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	63477076	63503060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.22	chr4	+	4375	9	ISM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	1342	2	-104	2	3prime_fragment	FALSE	canonical	3	53	junction_7	10.2827221590394	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	16	True	AATAAA	-16	NA	63478359	63504592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.23	chr4	+	3868	10	FSM	ENSMUSG00000045917.18	ENSMUST00000080336.4	3630	10	-236	-2	-103	2	multi-exon	FALSE	canonical	0	0	junction_1	24.5085019262024	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	16	True	AATAAA	-16	NA	63478360	63504592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63478643_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.24	chr4	+	2317	10	FSM	ENSMUSG00000045917.18	ENSMUST00000080336.4	3630	10	-224	1537	-91	-1537	multi-exon	FALSE	canonical	0	0	junction_1	24.5085019262024	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATATGTATTCATT	NA	False	NA	NA	False	NA	NA	NA	63478372	63503053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63478643_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.25	chr4	+	3666	9	ISM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	1422	631	-24	-627	3prime_fragment	FALSE	canonical	3	53	junction_7	10.2827221590394	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGGAGGCGTGGTGTG	NA	False	NA	17	True	AATAAA	-28	NA	63478439	63503963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.3	chr4	+	2181	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-187	-1539	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGCATATGTATTCA	NA	False	NA	NA	False	NA	NA	NA	63476830	63503051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.4	chr4	+	3829	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-61	-3	-61	3	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAGGGACCATGTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	63476956	63504597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.5	chr4	+	3139	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	-11	637	-11	-633	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGCTCGTGGAGGCGT	NA	False	NA	11	True	AATAAA	-22	NA	63477006	63503957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.6	chr4	+	3297	11	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-5	-622	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	29.9005016680323	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGCGTGGTGTGGTCCT	NA	False	NA	22	True	AATAAA	-33	NA	63477012	63503968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63478743_63478897_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.7	chr4	+	3811	11	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.3429719012918	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGTAAGGGACCATG	NA	False	NA	16	True	AATAAA	-16	NA	63477017	63504592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63478179_63478228_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.8	chr4	+	4150	12	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.0824164926285	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477017	63504594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_63477195_63478410_63478643_63478743_63478897_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23566.9	chr4	+	2475	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	1	1289	1	-1285	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTTGCCTTACCCGCT	NA	False	NA	NA	False	AAAAAG	-24	NA	63477018	63503305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ES.23567.1	chr4	-	3720	7	Antisense	novelGene_ENSMUSG00000077214.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGGTAATCATTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	64373222	64315417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_64318315_64323068_64323122_64323577_64323625_64325537_64325608_64345867_64345943_64351009_64351132_64372766
ES.23567.2	chr4	-	872	3	Antisense	novelGene_ENSMUSG00000077214.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATCTCTATGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64373268	64325359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_64325608_64351009_64351132_64372766
ES.23568.1	chr4	+	3577	1	Intergenic	novelGene_19333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTAGAGGTTAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	64786201	64789778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_64786200_64789800
ES.23569.1	chr4	-	2622	2	Genic_Genomic	ENSMUSG00000081941.2	novel	1214	1	NA	NA	-10264	694	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAGCATTGAATTCA	NA	False	NA	NA	False	TATAAA	-11	NA	64786640	64774468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_64776404_64785953
ES.23569.2	chr4	-	2820	2	Genic_Genomic	ENSMUSG00000081941.2	novel	1214	1	NA	NA	-10250	694	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAGCATTGAATTCA	NA	False	NA	NA	False	TATAAA	-11	NA	64786626	64774468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_64776404_64785741
ES.2357.1	chr10	-	8610	11	NNC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	-23	-95	intron_retention	TRUE	canonical	0	0	junction_7	55.9485477916988	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTGGTTCTTCATTGA	NA	False	NA	NA	False	AATAAA	-20	NA	13428909	13399685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13412974_13413064_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.2357.10	chr10	-	4153	11	ISM	ENSMUSG00000019809.17	ENSMUST00000170376.8	1381	12	95	930	73	-630	5prime_fragment	FALSE	canonical	3	96	junction_5	16.5435788147547	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATTTCATAATGAAGT	NA	False	NA	-2	True	AATAAA	-19	NA	13428791	13400515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.2357.12	chr10	-	1325	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	2	634	2	-634	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTCATTTCATAATG	NA	False	NA	-6	True	AATAAA	-15	NA	13428862	13400519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ES.2357.13	chr10	-	1354	12	NNC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	55	-639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	42.8381539987022	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAAGTCTTCATTTCA	NA	False	NA	-11	True	AATAAA	-45	NA	13428809	13400524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422186_13428565
ES.2357.14	chr10	-	1341	12	NNC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	71	-666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	42.7558898364012	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAATGCCTAATAAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	13428793	13400551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408149_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.2357.15	chr10	-	2705	1	NIC	ENSMUSG00000019809.17	novel	1381	12	NA	NA	6911	-2204	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAATCACTCATGTGA	NA	False	NA	NA	False	NA	NA	NA	13404794	13402089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13402100_13404800
ES.2357.16	chr10	-	2161	1	NIC	ENSMUSG00000019809.17	novel	1381	12	NA	NA	2	-15231	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAACTTACCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	13428862	13426701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13426700_13428900
ES.2357.2	chr10	-	1989	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	-4	-24	-4	-2	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTTTTAGCCATTAAT	NA	False	NA	NA	False	AATAAA	-32	NA	13428868	13399861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ES.2357.4	chr10	-	4818	10	NIC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	-2	-6	intron_retention	FALSE	canonical	1	1	junction_8	44.8043758885829	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGCTTTTTAGCCAT	NA	False	NA	NA	False	AATAAA	-28	NA	13428888	13399865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13422093_13422226_13428569
ES.2357.5	chr10	-	4860	10	NIC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	101	6	intron_retention	FALSE	canonical	3	113	junction_4	10.3708994574027	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTTTGTTTAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	13428763	13399879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.2357.6	chr10	-	2086	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	21	22	2	4	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCTTTGTTTAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	13428862	13399881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.2357.7	chr10	-	2691	6	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	16159	0	-1000	0	intron_retention	FALSE	canonical	3	113	junction_5	14.4858551697855	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATAGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-8	NA	13412705	13399885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298
ES.2357.8	chr10	-	1984	12	NNC	ENSMUSG00000019809.17	novel	2129	12	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.3930837958152	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATAGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-8	NA	13428776	13399885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418379_13418450_13422093_13422226_13428569
ES.2357.9	chr10	-	1463	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	20	646	1	-620	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAAGTAGATTCATTT	NA	False	NA	8	True	AATAAA	-29	NA	13428863	13400505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ES.23570.1	chr4	-	229	1	Intergenic	novelGene_19334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAAAAAATTTTCTGGA	NA	False	NA	NA	False	AATAAA	-27	NA	64939936	64939707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_64939700_64939900
ES.23571.1	chr4	+	172	1	Intergenic	novelGene_19335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAGGATATA	NA	False	NA	NA	False	NA	NA	NA	65121533	65121705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_65121500_65121700
ES.23572.1	chr4	+	3187	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	7	0	7	0	multi-exon	FALSE	canonical	3	75	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523229	65534475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_65523307_65531365
ES.23572.3	chr4	+	3285	3	NNC	ENSMUSG00000051675.14	novel	3194	2	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGATGGTCATGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	65523256	65534471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_65523307_65524478_65524608_65531365
ES.23572.4	chr4	+	3317	2	NIC	ENSMUSG00000051675.14	novel	660	2	NA	NA	88	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGATGGTCATGTCTTA	NA	False	NA	17	True	AATAAA	-18	NA	65523310	65534472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_65523521_65531365
ES.23572.5	chr4	+	3108	1	NIC	ENSMUSG00000051675.14	novel	3194	2	NA	NA	7878	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGATGGTCATGTCTT	NA	False	NA	16	True	AATAAA	-17	NA	65531363	65534471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_65531400_65534500
ES.23573.1	chr4	+	180	1	Intergenic	novelGene_19336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAATAAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	66156599	66156779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66156600_66156800
ES.23574.1	chr4	+	5313	1	Intergenic	novelGene_19337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	66820527	66825840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66820500_66825800
ES.23574.2	chr4	+	1788	1	Intergenic	novelGene_19338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTCCTGAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	66820664	66822452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66820700_66822500
ES.23574.3	chr4	+	5796	1	Intergenic	novelGene_19342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTTTTCTGCATTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	66820666	66826462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66820700_66826500
ES.23574.4	chr4	+	6180	1	Intergenic	novelGene_19343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGAAATGGCTTCCT	NA	False	NA	NA	False	AATAAA	-29	NA	66820666	66826846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66820700_66826800
ES.23574.5	chr4	+	4596	1	Intergenic	novelGene_19339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTTTTAGTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	66820666	66825262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66820700_66825300
ES.23574.6	chr4	+	5021	2	Intergenic	novelGene_19341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCCGTTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	66820666	66825837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66823190_66823339
ES.23574.7	chr4	+	3117	2	Intergenic	novelGene_19340	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	66820666	66825836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_66822938_66824990
ES.23575.1	chr4	-	220	1	Intergenic	novelGene_19344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCAATAGCAGTTCC	NA	False	NA	NA	False	NA	NA	NA	69216394	69216174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_69216200_69216400
ES.23576.1	chr4	-	997	1	FSM	ENSMUSG00000046341.6	ENSMUST00000120560.2	450	1	-91	-456	-91	456	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGGGAAGGATGTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	69844407	69843410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_69843400_69844400
ES.23576.2	chr4	-	893	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-89	456	multi-exon	FALSE	canonical	2	29	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGGGAAGGATGTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	69844405	69843410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_69844194_69844295
ES.23576.3	chr4	-	820	2	Genic_Genomic	ENSMUSG00000046341.6	novel	450	1	NA	NA	-91	429	multi-exon	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	69844407	69843437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_69843706_69843855
ES.23577.1	chr4	-	157	1	Intergenic	novelGene_19345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69881851	69881694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_69881700_69881900
ES.23578.1	chr4	-	4134	1	ISM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	189454	0	22863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTATTATATTCATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	70139226	70135092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_70135100_70139200
ES.23579.1	chr4	-	7441	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	4	1759	at_least_one_novel_splicesite	TRUE	canonical	3	31	junction_17	39.3689810214421	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGGCTCTTGTCCTAA	NA	False	NA	NA	False	NA	NA	NA	70328676	70139500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.10	chr4	-	5508	37	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	79	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_19	51.2785527207604	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGCCTCTGTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	70328576	70141258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.11	chr4	-	5717	38	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	42.090739921554	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGCCTCTGTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	70328689	70141258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.14	chr4	-	4769	33	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	96	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	55.0118506409074	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGCCTCTGTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	70328559	70141258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.15	chr4	-	4259	26	NNC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	61.013782049632	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGCCTCTGTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	70328682	70141258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173053_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70319481_70319550_70321710_70321779_70328448
ES.23579.2	chr4	-	7445	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	-9	4411	-9	1756	multi-exon	FALSE	canonical	3	146	junction_29	30.4796025702355	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTAAGGCTCTTGTCC	NA	False	NA	NA	False	NA	NA	NA	70328689	70139503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.20	chr4	-	5243	34	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	5312	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	53.5185832318816	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70316466	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70316374
ES.23579.21	chr4	-	5677	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_23	42.4548689205576	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328678	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225521_70233555_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.22	chr4	-	5706	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	50.595691833794	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225521_70233555_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.24	chr4	-	5670	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	42.5704481483993	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328676	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220446_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.25	chr4	-	4488	25	NNC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	-68571	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	61.5876605380944	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	8848	False	NA	-4	True	AATAAA	-15	NA	70251488	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70251103
ES.23579.26	chr4	-	5722	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.8844539301702	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328700	70141259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168567_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.27	chr4	-	4965	34	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	44.5999872347592	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328680	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.28	chr4	-	5593	36	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_18	42.9686739238659	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328690	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.29	chr4	-	5633	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	42.8006702814712	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328676	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185244_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.3	chr4	-	7471	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-9	1756	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	50.595691833794	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTAAGGCTCTTGTCC	NA	False	NA	NA	False	NA	NA	NA	70328689	70139503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225521_70233555_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.30	chr4	-	5493	35	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	50.4802284088297	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328676	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70319481_70319550_70321710_70321779_70328448
ES.23579.31	chr4	-	5888	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	50.963442403853	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328673	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182538_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.32	chr4	-	5690	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	51.9950956257973	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328680	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233559_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295117_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.34	chr4	-	5797	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	51.0332251160106	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328673	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298591_70311979_70312053_70319481_70319550_70321710_70321779_70328448
ES.23579.35	chr4	-	5757	39	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	57.3547847144411	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328642	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70234560_70234650_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.37	chr4	-	7998	16	NIC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	-16845	-1	intron_retention	FALSE	canonical	3	161	junction_10	32.7336727748863	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70199762	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326
ES.23579.4	chr4	-	5869	34	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	26717	686	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	44.1650631238609	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTATAGCTCTTT	NA	False	NA	NA	False	ACTAAA	-13	NA	70295061	70140573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029
ES.23579.40	chr4	-	4336	28	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	59.4262231217249	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328654	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70328448
ES.23579.41	chr4	-	5678	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.6061473513035	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328682	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173046_70175567_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225521_70233555_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.43	chr4	-	5694	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	42.5704481483993	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGCCTCTGTCCT	NA	False	NA	-5	True	AATAAA	-14	NA	70328671	70141260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220476_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.45	chr4	-	3893	24	NIC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	-50719	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	62.7433937507151	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCAGCTGCCTCTGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	70233636	70141261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70233560
ES.23579.46	chr4	-	5776	39	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	57.367871798433	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCAGCTGCCTCTGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	70328677	70141261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70197762_70197837_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.47	chr4	-	4588	29	NIC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	57.5651693690707	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328677	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70319481_70319550_70321710_70321779_70328448
ES.23579.48	chr4	-	4467	28	NNC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	58.780403217987	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328676	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217093_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70319481_70319550_70321710_70321779_70328448
ES.23579.49	chr4	-	5683	37	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-99	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	51.5175266832129	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328779	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.5	chr4	-	5778	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-24	68	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_17	39.3689810214421	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGCGGTGATTTTTGTCT	NA	False	NA	64	True	NA	NA	NA	70328704	70141191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.51	chr4	-	5726	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	50.7123110817483	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328684	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70266783_70266829_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.52	chr4	-	5537	36	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	52.6557553495206	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328673	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218891_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70319481_70319550_70321710_70321779_70328448
ES.23579.54	chr4	-	5405	36	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	106	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	43.522980090044	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328549	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.55	chr4	-	5452	36	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	98	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	43.1584267080992	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328557	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.57	chr4	-	5415	34	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	43.7364592714722	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328682	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.58	chr4	-	5428	36	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.3218339994563	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70321752	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175567_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225521_70233555_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710
ES.23579.6	chr4	-	5787	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	51.2233825122578	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTGTCCTCACTGT	NA	False	NA	1	True	AATAAA	-20	NA	70328689	70141254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70234769_70234863_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.63	chr4	-	5716	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	52.0157561599261	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328689	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163742_70168567_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233559_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.64	chr4	-	5762	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	51.3148661282091	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGCTGCCTCTGTC	NA	False	NA	-7	True	AATAAA	-12	NA	70328676	70141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70234560_70234650_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.66	chr4	-	5707	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	51.8627328199696	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATCAGCTGCCTCTGT	NA	False	NA	-8	True	AATAAA	-11	NA	70328680	70141263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168560_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319552_70321710_70321779_70328448
ES.23579.67	chr4	-	5778	36	ISM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	4	6480	4	-313	5prime_fragment	FALSE	canonical	3	146	junction_28	28.751915641592	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACAGAGGCATATGTGC	NA	False	NA	NA	False	AATACA	-12	NA	70328676	70141572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.68	chr4	-	142	1	Intergenic	novelGene_19346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	70166334	70166192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_70166200_70166300
ES.23579.69	chr4	-	1836	7	NNC	ENSMUSG00000039298.17	novel	5248	34	NA	NA	-35936	-23066	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	51.1501058975769	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTCACTTCATAAAACG	NA	False	NA	NA	False	ATTAAA	-25	NA	70218853	70190311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802
ES.23579.7	chr4	-	5717	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_18	48.2641108627347	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTGTCCTCACTGT	NA	False	NA	1	True	AATAAA	-20	NA	70328679	70141254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.23579.70	chr4	-	2694	1	Intergenic	novelGene_19347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGAGCTCTCTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	70205897	70203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_70203200_70205900
ES.23579.71	chr4	-	6144	2	Genic_Genomic	ENSMUSG00000039298.17	novel	11847	37	NA	NA	-43821	-53303	multi-exon	TRUE	canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTACATGTGACATAAAAA	NA	False	NA	NA	False	NA	NA	NA	70226738	70220548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_70223569_70223614
ES.23579.72	chr4	-	7700	11	ISM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	30142	92193	23240	-60040	internal_fragment	FALSE	canonical	3	146	junction_6	9.15204895091804	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAGCCTTTTTCTCA	8815	False	NA	NA	False	NA	NA	NA	70298538	70227285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427
ES.23579.73	chr4	-	4996	7	ISM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	31883	129766	24981	52264	internal_fragment	FALSE	canonical	3	146	junction_3	7.71182353417285	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTGCAGGGAGGCCA	NA	False	NA	NA	False	AAGAAA	-12	NA	70296797	70264858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029
ES.23579.74	chr4	-	3659	1	Intergenic	novelGene_19348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGTTTTATATGTTAT	NA	False	NA	NA	False	NA	NA	NA	70309362	70305703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_70305700_70309400
ES.23579.75	chr4	-	639	4	NIC	ENSMUSG00000039298.17	novel	517	3	NA	NA	-14	-124	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	93.1032879238012	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTGTTCCTGTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	70328694	70317246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_70317504_70319481_70319550_70321710_70321779_70328448
ES.23579.8	chr4	-	5791	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	-107	6163	-107	4	multi-exon	FALSE	canonical	3	146	junction_29	30.4796025702355	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTCTGTCCTCACTG	NA	False	NA	0	True	AATAAA	-19	NA	70328787	70141255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ES.2358.1	chr10	-	5161	2	Antisense	novelGene_ENSMUSG00000019808.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTTAATTAAAAAATTAA	7861	False	NA	NA	False	NA	NA	NA	13438289	13429971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_13432701_13435857
ES.2358.2	chr10	-	3323	2	Antisense	novelGene_ENSMUSG00000019808.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAAATACACATGTAAC	7861	False	NA	NA	False	NA	NA	NA	13438289	13433525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_13436004_13437444
ES.2358.3	chr10	-	4765	1	Antisense	novelGene_ENSMUSG00000019808.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAAATACACATGTAAC	7860	False	NA	NA	False	NA	NA	NA	13438290	13433525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_13433500_13438300
ES.23580.1	chr4	+	3961	1	Antisense	novelGene_ENSMUSG00000039270.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATCACAATCCTATCTT	NA	False	NA	NA	False	NA	NA	NA	70348689	70352650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_70348700_70352600
ES.23581.1	chr4	-	6198	6	FSM	ENSMUSG00000039270.10	ENSMUST00000107359.9	7924	6	-57	1783	10	-1783	multi-exon	FALSE	canonical	1	2	junction_2	4.93963561409139	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGATTCGTTTCACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	70453222	70347084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_70351769_70353453_70353724_70366899_70367044_70374097_70374238_70406367_70406570_70452464
ES.23582.1	chr4	-	178	1	Intergenic	novelGene_19349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	70952559	70952381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_70952400_70952600
ES.23583.1	chr4	+	201	1	Intergenic	novelGene_19350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCCCCAAGGGGAATT	NA	False	NA	NA	False	NA	NA	NA	71444292	71444493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_71444300_71444500
ES.23584.1	chr4	-	147	1	Intergenic	novelGene_19351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	71663474	71663327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_71663300_71663500
ES.23585.1	chr4	+	1769	1	Intergenic	novelGene_19352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTAGCTAATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	72109838	72111607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_72109800_72111600
ES.23586.1	chr4	+	3658	1	Genic_Genomic	ENSMUSG00000084910.2	novel	NA	NA	NA	NA	-1112	-11459	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTATTTTGTCATCTT	NA	False	NA	NA	False	AATAAA	-5	NA	72118472	72122130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_72118500_72122100
ES.23587.10	chr4	-	4720	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-31	542	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGGCCAAAGCTGAT	NA	False	NA	NA	False	ATTAAA	-26	NA	72119187	72034836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.11	chr4	-	4364	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-7	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTGTTCAGAAAGCT	NA	False	NA	NA	False	AATATA	-27	NA	72119137	72035364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.12	chr4	-	3525	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-37	4	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCCTTGACTCTTTT	NA	False	NA	85	True	AGTAAA	-22	NA	72119193	72036037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.13	chr4	-	3657	18	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	97.5501290704472	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119143	72036041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.15	chr4	-	3593	17	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	85.6456863697758	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119181	72036041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.16	chr4	-	3820	19	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119270	72036041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.17	chr4	-	3530	18	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	78.878558491008	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119172	72036041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.18	chr4	-	3695	19	NNC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	88.9901506548913	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119127	72036041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076649_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117659_72118218
ES.23587.19	chr4	-	3713	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.6087946676898	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119140	72036042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117659_72118218
ES.23587.2	chr4	-	9100	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-7	4972	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTCTATTTCATTC	NA	False	NA	NA	False	NA	NA	NA	72119137	72030406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.21	chr4	-	3810	19	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	-75	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	84.7656901241429	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTCCTCCTTGACT	NA	False	NA	80	True	AGTAAA	-17	NA	72119231	72036042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.22	chr4	-	3389	17	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	77.5763484816732	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119138	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.23	chr4	-	5174	21	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	103.894598030889	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119095	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72041580_72041650_72042229_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.24	chr4	-	3179	17	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.4131137542178	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119129	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.25	chr4	-	3849	20	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	100.177681481635	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119181	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040747_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.26	chr4	-	3600	19	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	92.4091145095788	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119172	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.27	chr4	-	3407	16	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_12	75.7282862167984	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119219	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.28	chr4	-	3771	20	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	97.726822602373	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119091	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.3	chr4	-	9317	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-2	4972	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTCTATTTCATTC	NA	False	NA	NA	False	NA	NA	NA	72119132	72030406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.30	chr4	-	3372	16	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	76.9060032333844	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119169	72036043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117650_72118218
ES.23587.32	chr4	-	5736	18	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	78.9824123035451	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119136	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.33	chr4	-	3406	16	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	76.9060032333844	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119126	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117728_72118218
ES.23587.36	chr4	-	3694	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119129	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063676_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.37	chr4	-	3695	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	84.4769856890687	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119157	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076438_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.38	chr4	-	4225	18	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-12	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	86.8050753543042	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119168	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.39	chr4	-	3681	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	94.1825945231448	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119119	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040747_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.40	chr4	-	3870	19	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	-119	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	93.8404214150705	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTCCTCCTTGA	NA	False	NA	78	True	AGTAAA	-15	NA	72119275	72036044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040747_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.41	chr4	-	3477	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	1	1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_17	79.372582926444	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTCTTCCTCCTTG	NA	False	NA	77	True	AGTAAA	-14	NA	72119129	72036045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117659_72118218
ES.23587.43	chr4	-	3829	20	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.7895184643293	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTCTTCCTCCTTG	NA	False	NA	77	True	AGTAAA	-14	NA	72119181	72036045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057198_72057301_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.47	chr4	-	3620	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	94.3096587227155	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTGGTCTTCCTCCTT	NA	False	NA	76	True	AGTAAA	-13	NA	72119169	72036046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044515_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.48	chr4	-	5028	21	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	98.8193300928518	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTGGTCTTCCTCCTT	NA	False	NA	76	True	AGTAAA	-13	NA	72119135	72036046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72040810_72041542_72041611_72042229_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.49	chr4	-	3678	19	NNC	ENSMUSG00000008305.19	novel	3660	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	87.0444047315031	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTGGTCTTCCTCCTT	NA	False	NA	76	True	AGTAAA	-13	NA	72119125	72036046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117646_72118218
ES.23587.5	chr4	-	8960	16	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-7	4970	combination_of_known_splicesites	FALSE	canonical	2	12	junction_12	75.7282862167984	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTCTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	72119137	72030408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.50	chr4	-	3546	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	96.7406645255216	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAAGTGGTCTTCCTCCT	NA	False	NA	75	True	AGTAAA	-12	NA	72119104	72036047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040586_72040729_72043008_72043252_72044515_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.52	chr4	-	3224	16	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	96.5259665697382	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTAAGTGGTCTTCCTCC	NA	False	NA	74	True	AGTAAA	-11	NA	72119137	72036048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044515_72044675_72055318_72055396_72056728_72056926_72057930_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.54	chr4	-	3618	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-40	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.516700346312	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGATTTTTTTTTTC	NA	False	NA	-24	True	AATGAA	-19	NA	72119196	72036146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059528_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.55	chr4	-	3620	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-26	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	87.2297413602596	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGTGATTTTTTTTT	NA	False	NA	-26	True	AATGAA	-17	NA	72119182	72036148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057927_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.57	chr4	-	2148	7	NNC	ENSMUSG00000008305.19	novel	2067	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	105.657333972717	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119169	72075816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117646_72118218
ES.23587.58	chr4	-	2165	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	-99	1	-42	-1	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119198	72075817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.59	chr4	-	2537	4	NNC	ENSMUSG00000008305.19	novel	589	6	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	141.356130236915	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119127	72075817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72076652_72116009_72116055_72116154_72116219_72117533
ES.23587.6	chr4	-	9160	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-3	4817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	84.4769856890687	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTGTCATGATTCT	NA	False	NA	NA	False	NA	NA	NA	72119133	72030561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076652_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.60	chr4	-	1459	8	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.832687475449	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTGTGTTCTAATT	NA	False	NA	-1	True	AATAAA	-19	NA	72119128	72075817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218_72118410_72119075
ES.23587.61	chr4	-	2120	6	NIC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	143.740599692641	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	72119187	72075818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72076655_72087328_72087434_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.62	chr4	-	12798	6	FSM	ENSMUSG00000008305.19	ENSMUST00000134225.2	3200	6	2	-9600	2	-2	multi-exon	FALSE	canonical	3	256	junction_2	22.3302485431757	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGCCTGTGTTCTAAT	NA	False	NA	-2	True	AATAAA	-18	NA	72119128	72075818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.63	chr4	-	2268	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-884	39378	-117	-3	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGGCCTGTGTTCTAA	NA	False	NA	-3	True	AATAAA	-17	NA	72119273	72075819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.64	chr4	-	2061	8	NNC	ENSMUSG00000008305.19	novel	2569	20	NA	NA	92	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.744805884524	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCCTGGGGCCTGTGT	NA	False	NA	-8	True	AATAAA	-12	NA	72118999	72075824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72076655_72079304_72079377_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.7	chr4	-	5629	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-7	1501	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCTTTTCAATATCCA	NA	False	NA	NA	False	NA	NA	NA	72119137	72033877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.8	chr4	-	5888	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-22	1497	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTTCCTTTTCAATA	NA	False	NA	NA	False	NA	NA	NA	72119178	72033881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23587.9	chr4	-	4930	19	NNC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	-13	548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.8138080758343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAAAGCTGATTTCTCT	NA	False	NA	NA	False	ATTAAA	-32	NA	72119169	72034830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076432_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ES.23588.1	chr4	+	178	1	Intergenic	novelGene_19353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	72125885	72126063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_72125900_72126100
ES.23589.1	chr4	+	172	1	Intergenic	novelGene_19354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGGCACCA	NA	False	NA	NA	False	NA	NA	NA	72581086	72581258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_72581100_72581300
ES.2359.1	chr10	+	4011	3	Antisense	novelGene_ENSMUSG00000019806.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13731631	13735746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13733770_13733809_13734118_13734181
ES.2359.2	chr10	+	1760	1	Intergenic	novelGene_1804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13731631	13733391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_13731600_13733400
ES.2359.3	chr10	+	4008	3	Antisense	novelGene_ENSMUSG00000019806.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13731633	13735751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_13733770_13733811_13734103_13734170
ES.23590.1	chr4	+	1325	6	NNC	ENSMUSG00000095935.2	novel	1323	6	NA	NA	-2	-45367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.49666295470958	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	73526115	73530161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_73526241_73526934_73527023_73527489_73527799_73528076_73528155_73529133_73529440_73529742
ES.23591.1	chr4	-	157	1	Intergenic	novelGene_19355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73706497	73706340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_73706300_73706500
ES.23592.1	chr4	-	932	4	ISM	ENSMUSG00000096530.8	ENSMUST00000107327.8	1325	6	1556	1	1556	-1	3prime_fragment	TRUE	canonical	0	0	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTTTTCTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	73792947	73790456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_73790875_73791179_73791486_73792461_73792540_73792817
ES.23593.1	chr4	-	1322	6	FSM	ENSMUSG00000096333.8	ENSMUST00000107319.8	1324	6	-2	4	-2	0	multi-exon	TRUE	canonical	0	0	junction_3	1.67332005306815	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAACTCTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	73824192	73820147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_73820562_73820866_73821173_73822148_73822227_73822504_73822814_73823283_73823372_73824065
ES.23594.1	chr4	-	158	1	Intergenic	novelGene_19356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAACAAATAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	74068292	74068134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74068100_74068300
ES.23595.1	chr4	-	206	1	Intergenic	novelGene_19357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGTTGTTAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74129747	74129541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74129500_74129700
ES.23596.1	chr4	-	172	1	Intergenic	novelGene_19358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74162276	74162104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74162100_74162300
ES.23597.1	chr4	-	185	1	Intergenic	novelGene_19359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTTACAAGTATATTCCA	NA	False	NA	NA	False	NA	NA	NA	74163397	74163212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74163200_74163400
ES.23598.1	chr4	+	166	1	Intergenic	novelGene_19360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	74165979	74166145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_74166000_74166100
ES.23599.1	chr4	-	199	1	ISM	ENSMUSG00000085482.2	ENSMUST00000126646.2	572	2	991	201	991	-201	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGGAAAAATACAATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	74168960	74168761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_74168800_74169000
ES.236.1	chr1	-	6454	37	NNC	ENSMUSG00000096992.4	novel	1750	3	NA	NA	-11099	159960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGGCCAACAATGAAG	NA	False	NA	NA	False	NA	NA	NA	34228626	34044976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34045089_34045270_34045477_34125319_34125383_34153011_34153100_34155193_34155275_34156510_34156604_34174168_34174336_34191280_34191394_34191491_34191601_34193593_34193712_34195677_34195774_34195859_34195988_34199698_34199795_34200084_34200238_34202087_34202551_34202704_34202834_34202975_34203055_34203155_34203318_34203406_34203511_34204136_34204233_34205258_34205386_34206015_34206177_34206361_34206509_34206688_34206818_34206902_34207086_34208242_34208400_34208827_34209011_34209441_34209578_34210194_34210389_34211261_34211425_34212080_34212165_34213193_34213302_34213775_34213875_34223094_34223224_34225040_34225132_34225899_34226031_34227050
ES.236.16	chr1	-	173	2	Antisense	novelGene_ENSMUSG00000103364.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34129728	34068827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34068911_34129638
ES.236.17	chr1	-	1454	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCTGACTACACCATA	4333	False	NA	NA	False	AATAAA	-42	NA	34140243	34138789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34138800_34140200
ES.236.18	chr1	-	1975	1	Antisense	novelGene_ENSMUSG00000026131.21_AS_novelGene_ENSMUSG00000105982.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGAATTTCCCCCAT	NA	False	NA	NA	False	AAAAAG	-10	NA	34156461	34154486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34154500_34156500
ES.236.19	chr1	-	2772	1	Antisense	novelGene_ENSMUSG00000026131.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTCTAAAGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	34192929	34190157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34190200_34192900
ES.236.2	chr1	-	5151	37	NNC	ENSMUSG00000096992.4	novel	1750	3	NA	NA	-9800	159960	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGGCCAACAATGAAG	NA	False	NA	NA	False	NA	NA	NA	34227327	34044976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34045089_34045270_34045477_34125319_34125383_34153011_34153104_34155199_34155275_34156510_34156604_34174168_34174336_34191280_34191394_34191491_34191601_34193593_34193712_34195677_34195774_34195859_34195988_34199698_34199795_34200084_34200238_34202087_34202551_34202704_34202834_34202975_34203055_34203155_34203318_34203406_34203511_34204136_34204233_34205258_34205386_34206015_34206177_34206361_34206509_34206688_34206818_34206902_34207086_34208242_34208400_34208827_34209011_34209441_34209578_34210194_34210389_34211261_34211425_34212080_34212169_34213198_34213302_34213775_34213876_34223096_34223224_34225040_34225132_34225899_34226031_34227050
ES.236.20	chr1	-	152	1	FSM	ENSMUSG00000096992.4	ENSMUST00000187268.2	3416	1	3252	12	3077	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34214275	34214123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34214100_34214300
ES.236.3	chr1	-	1670	1	Antisense	novelGene_ENSMUSG00000026131.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGTGTATGACGTACC	NA	False	NA	NA	False	AGTAAA	-18	NA	34051197	34049527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34049500_34051200
ES.236.4	chr1	-	243	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACTGACCCAGGTTTA	4855	False	NA	NA	False	GATAAA	-9	NA	34069006	34068763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34068800_34069000
ES.236.5	chr1	-	204	2	Antisense	novelGene_ENSMUSG00000103364.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTACTCCCTGTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	34129731	34068803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34068925_34129648
ES.236.6	chr1	-	178	2	Antisense	novelGene_ENSMUSG00000103364.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34129729	34068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34068907_34129631
ES.236.8	chr1	-	179	2	Antisense	novelGene_ENSMUSG00000103364.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34129728	34068826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_34068935_34129657
ES.2360.1	chr10	-	1437	6	NNC	ENSMUSG00000019806.14	novel	1554	6	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.7727956058676	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744588	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13523451_13566267_13566384_13677591_13677694_13704948_13705143_13719924_13720073_13744361
ES.2360.10	chr10	-	1479	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-28	-12	-5	12	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTGCAGTTAGATTTA	NA	False	NA	NA	False	AATAAA	-29	NA	13744729	13528182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.11	chr10	-	1225	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	-44	258	-21	-258	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGACTGGTTTTGTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	13744745	13528452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.12	chr10	-	1166	5	NIC	ENSMUSG00000019806.14	novel	1439	6	NA	NA	-72	-266	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.3623004086584	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACGGAAGCAGACTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	13744796	13528460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13528756_13529329_13529494_13566267_13566384_13704986_13705143_13744361
ES.2360.13	chr10	-	179	1	Intergenic	novelGene_1801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	13560692	13560513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13560500_13560700
ES.2360.14	chr10	-	5041	4	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	143	33603	8	-32466	5prime_fragment	FALSE	canonical	3	116	junction_3	5.35412613473634	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCTGCATGTCTGCAGA	NA	False	NA	NA	False	AATAAA	-3	NA	13744558	13561797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.15	chr10	-	4353	1	Intergenic	novelGene_1802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCTACTGGGTATACAAA	NA	False	NA	NA	False	NA	NA	NA	13632701	13628348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13628300_13632700
ES.2360.16	chr10	-	3380	1	Intergenic	novelGene_1803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACAGATCTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	13635757	13632377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13632400_13635800
ES.2360.17	chr10	-	6175	5	NNC	ENSMUSG00000019806.14	novel	4369	4	NA	NA	-18	21101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.0578393944856	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGTGTTCACTGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	13744591	13652789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13658329_13677591_13677694_13704986_13705143_13719924_13720073_13744361
ES.2360.18	chr10	-	5189	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	49	144757	49	939	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTAGGCAGTGGAAC	NA	False	NA	NA	False	AATAAA	-11	NA	13744652	13672951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13677694_13704986_13705143_13744361
ES.2360.19	chr10	-	4645	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	112	145238	-16	458	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13744589	13673432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13677694_13704986_13705143_13744361
ES.2360.2	chr10	-	1537	6	NNC	ENSMUSG00000019806.14	novel	1554	6	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	58.8985568583815	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744726	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13719924_13720073_13744361
ES.2360.20	chr10	-	4062	2	ISM	ENSMUSG00000019806.14	ENSMUST00000162798.2	4369	4	31927	-102	14887	102	3prime_fragment	FALSE	canonical	3	129	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAAAACATTACTCAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	13705143	13673788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13677694_13704986
ES.2360.21	chr10	-	4095	4	NNC	ENSMUSG00000019806.14	novel	4369	4	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	57.0516335339216	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAAATATTATATATATA	NA	False	NA	NA	False	NA	NA	NA	13744572	13673883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13677510_13677591_13677694_13704986_13705143_13744361
ES.2360.22	chr10	-	2257	2	NNC	ENSMUSG00000019806.14	novel	4369	4	NA	NA	41532	-2269	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTCCAGTTCCTTCTC	501	False	NA	NA	False	NA	NA	NA	13678498	13676159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13677510_13677591
ES.2360.23	chr10	-	1992	3	ISM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	34	147969	34	-2273	5prime_fragment	FALSE	canonical	3	116	junction_2	6.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTACTCTTCCAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	13744667	13676163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_13677694_13704986_13705143_13744361
ES.2360.3	chr10	-	1260	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-31	-612	-24	-3	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744597	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.4	chr10	-	3478	1	NIC	ENSMUSG00000019806.14	novel	1554	6	NA	NA	193752	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13526278	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_13522800_13526300
ES.2360.5	chr10	-	1626	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	-75	3	-75	-3	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744799	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.6	chr10	-	1400	6	NNC	ENSMUSG00000019806.14	novel	1554	6	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.9766609926118	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTCTGCACTGT	NA	False	NA	-3	True	AATAAA	-14	NA	13744575	13522800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13523445_13529325_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.7	chr10	-	1450	6	NNC	ENSMUSG00000019806.14	novel	1554	6	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.2906741832073	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCTGCTGTCTGCACTG	NA	False	NA	-4	True	AATAAA	-13	NA	13744657	13522801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_13523451_13529359_13529494_13566267_13566384_13677591_13677694_13704989_13705143_13744361
ES.2360.8	chr10	-	1229	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	-8	333	-8	282	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTGCAATAATAACTCC	NA	False	NA	NA	False	ATTAAA	-19	NA	13744732	13523130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.2360.9	chr10	-	934	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-37	-280	-30	280	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCTGCAATAATAACT	NA	False	NA	NA	False	ATTAAA	-17	NA	13744603	13523132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ES.23600.1	chr4	+	4378	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-128	-54	-128	54	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGGTTGCTCATGAAAC	NA	False	NA	68	True	ATTAAA	-18	NA	74170044	74324151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.10	chr4	+	4352	23	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.9109037182383	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170133	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74294751_74294868_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.11	chr4	+	4062	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-39	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	75.8171979170953	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTTCTGTCTGTCAATT	NA	False	NA	17	True	ATTAAA	-18	NA	74170133	74324100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74181045_74181207_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.12	chr4	+	4265	23	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.4552304502997	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCTTCTGTCTGTC	NA	False	NA	13	True	ATTAAA	-14	NA	74170156	74324096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74187473_74187527_74189430_74189607_74199133_74199249_74216677_74216873_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.13	chr4	+	3637	20	ISM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-15	13805	-15	-13805	5prime_fragment	FALSE	canonical	0	0	junction_5	56.6758778022338	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGGATGGATGGATGG	NA	False	NA	NA	False	NA	NA	NA	74170157	74310292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613
ES.23600.14	chr4	+	2894	5	ISM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	-12	105141	-12	27060	5prime_fragment	FALSE	canonical	3	203	junction_1	13.9888348335378	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGCAATCCTATTTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	74170160	74218956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677
ES.23600.16	chr4	+	1442	1	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	1	-16304	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCGTTTTTAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	74170173	74171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170200_74171600
ES.23600.17	chr4	+	3923	21	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	71.9740230916683	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTTCTGTCTGTCAAT	NA	False	NA	16	True	ATTAAA	-17	NA	74170173	74324099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74189430_74189607_74199133_74199249_74216677_74216759_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.18	chr4	+	3902	20	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.3239924279513	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170179	74324097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277770_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.19	chr4	+	3825	6	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	7	28355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.5684271697372	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTACAGTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	74170179	74220251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74219188_74219532
ES.23600.21	chr4	+	3663	18	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	78.277830099723	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCTTCTGTCTGTC	NA	False	NA	13	True	ATTAAA	-14	NA	74170182	74324096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74309613_74309734_74317583_74317677_74323057
ES.23600.23	chr4	+	3909	20	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	88.1612725197361	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170184	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74189430_74189607_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.24	chr4	+	2987	16	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.0289398469531	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170192	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266718_74323516
ES.23600.25	chr4	+	8370	23	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.6641942314397	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170201	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74301483_74301551_74309613_74312888_74316602_74317677_74323057
ES.23600.26	chr4	+	5777	23	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.34366191828	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCTTCTGTCTGTC	NA	False	NA	13	True	ATTAAA	-14	NA	74170205	74324096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74187473_74189089_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.29	chr4	+	3790	20	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	98	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	58.5067650041133	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170270	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.3	chr4	+	8514	22	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-112	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.6854497349683	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCTTCTGTCTGTC	NA	False	NA	13	True	ATTAAA	-14	NA	74170060	74324096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74312927_74316569_74317677_74323057
ES.23600.31	chr4	+	4370	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	159	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.2580822483617	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCTGTCAATTTTC	NA	False	NA	20	True	ATTAAA	-21	NA	74170331	74324103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170651_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.32	chr4	+	6379	23	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	93.8337394605854	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170360	74324097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170651_74181045_74181207_74181955_74182043_74187473_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.33	chr4	+	4352	24	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	336	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	99.4427764319715	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170508	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170651_74181045_74181207_74187473_74187541_74188991_74189089_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.34	chr4	+	4638	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	419	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9925840495591	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170591	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74171184_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.35	chr4	+	4197	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	-2528	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9925840495591	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCCGTCTTCTGTCT	NA	False	NA	10	True	ATTAAA	-11	NA	74178517	74324093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74178674_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.36	chr4	+	4053	21	ISM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	10869	-4	-4	4	3prime_fragment	FALSE	canonical	0	0	junction_4	57.0311099313348	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTCTGTCTGTCAATTT	NA	False	NA	18	True	ATTAAA	-19	NA	74181041	74324101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.37	chr4	+	4858	7	NNC	ENSMUSG00000028397.14	novel	4189	22	NA	NA	105335	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	125.986330828211	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCCGTCTTCTGTCTGT	NA	False	NA	12	True	ATTAAA	-13	NA	74286381	74324095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74289561_74291567_74291639_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.39	chr4	+	2332	1	Genic_Genomic	ENSMUSG00000028397.14	novel	NA	NA	NA	NA	140723	4	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTCTGTCTGTCAATTT	NA	False	NA	18	True	ATTAAA	-19	NA	74321769	74324101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_74321800_74324100
ES.23600.4	chr4	+	4373	23	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-111	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	84.1216282956258	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCGTCTTCTGTCTGTC	NA	False	NA	13	True	ATTAAA	-14	NA	74170061	74324096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74181045_74181207_74187473_74187541_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.5	chr4	+	4187	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-105	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	72.8474433319386	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170067	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.6	chr4	+	4173	22	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-103	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.9925840495591	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTTCTGTCTGTCAATT	NA	False	NA	17	True	ATTAAA	-18	NA	74170069	74324100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170294_74181143_74181207_74189430_74189607_74199133_74199249_74216677_74216871_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.8	chr4	+	4113	21	NNC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-78	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	74.8175113192092	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170094	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_74170324_74189430_74189607_74199133_74199249_74216677_74216871_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23600.9	chr4	+	3636	17	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	-78	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.2094731824273	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTTCTGTCTGTCAA	NA	False	NA	15	True	ATTAAA	-16	NA	74170094	74324098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_74170324_74181045_74181207_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ES.23601.1	chr4	-	344	1	Intergenic	novelGene_19361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	74205460	74205116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74205100_74205500
ES.23601.2	chr4	-	180	1	Intergenic	novelGene_19362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	74205460	74205280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74205300_74205500
ES.23602.1	chr4	-	158	1	Intergenic	novelGene_19363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	74235737	74235579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74235600_74235700
ES.23603.1	chr4	-	180	1	Intergenic	novelGene_19364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	74303969	74303789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74303800_74304000
ES.23604.1	chr4	-	159	1	Intergenic	novelGene_19365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74772691	74772532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_74772500_74772700
ES.23605.1	chr4	+	179	1	Intergenic	novelGene_19366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	75064790	75064969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_75064800_75065000
ES.23606.1	chr4	-	3698	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	18	-2975	18	2975	multi-exon	FALSE	canonical	3	402	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTCTACTTTGAATAA	NA	False	NA	NA	False	NA	NA	NA	75196524	75192615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_75196007_75196217
ES.23606.2	chr4	-	755	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	-16	2	-16	-2	multi-exon	FALSE	canonical	3	402	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAGTTCTTTTAATT	NA	False	NA	NA	False	AATAAA	-14	NA	75196558	75195592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_75196007_75196217
ES.23606.3	chr4	-	723	2	NNC	ENSMUSG00000028398.9	novel	741	2	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAGTAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	75196539	75195596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_75195998_75196217
ES.23606.4	chr4	-	944	1	NIC	ENSMUSG00000028398.9	novel	741	2	NA	NA	2	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAGTAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	75196540	75195596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_75195600_75196500
ES.23606.5	chr4	-	608	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	2	131	2	-131	multi-exon	FALSE	canonical	3	402	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGGTTCTCTGTCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	75196540	75195721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_75196007_75196217
ES.23607.1	chr4	+	191	1	Intergenic	novelGene_19367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	75780904	75781095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_75780900_75781100
ES.23608.1	chr4	-	5563	13	ISM	ENSMUSG00000028399.19	ENSMUST00000102834.8	8084	22	83462	1	34037	-1	3prime_fragment	FALSE	canonical	1	1	junction_10	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCCTGGGCTTTGTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	75968657	75859476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563
ES.23608.2	chr4	-	5736	15	ISM	ENSMUSG00000028399.19	ENSMUST00000050757.16	4698	30	284459	-3714	24673	-5	3prime_fragment	TRUE	canonical	0	0	junction_12	1.8516401995451	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCAGTCCTGGGCTTTGT	4755	False	NA	-7	True	AATAAA	-12	NA	75978021	75859480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75958116_75958159_75968563_75968677_75977905
ES.23608.3	chr4	-	3473	12	NNC	ENSMUSG00000028399.19	novel	8084	22	NA	NA	71859	1530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1.84972635903416	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATATAAACTCTTTGAA	NA	False	NA	NA	False	ATTAAA	-19	NA	75930835	75861512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75930697
ES.23608.4	chr4	-	6616	17	NIC	ENSMUSG00000028399.19	novel	8084	22	NA	NA	922	477	intron_retention	FALSE	canonical	1	1	junction_9	1.43478003540612	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCATATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	76003831	75862565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_75863264_75865279_75865416_75868887_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697
ES.23608.5	chr4	-	6510	33	NIC	ENSMUSG00000028399.19	novel	9899	36	NA	NA	261	476	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	1.80250476767747	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCTTCATATTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	76367956	75862566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697_76003799_76004248_76004837_76009658_76009777_76013756_76013784_76017648_76017843_76018683_76018990_76021191_76021337_76025519_76025654_76046721_76047304_76051299_76051570_76055047_76055159_76058750_76058940_76161881_76162024_76164989_76165136_76243416_76243583_76367879
ES.23608.6	chr4	-	4815	19	NIC	ENSMUSG00000028399.19	novel	5694	31	NA	NA	-5367	476	intron_retention	FALSE	canonical	1	1	junction_10	1.44871164560059	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCTTCATATTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	76010120	75862566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697_76004837_76009658
ES.23608.8	chr4	-	1617	1	Intergenic	novelGene_19368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACAAGTAGCCTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	76111150	76109533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_76109500_76111200
ES.23609.1	chr4	+	711	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAGCATTTCATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	77228927	77232619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_77229411_77232391
ES.23609.2	chr4	+	6526	1	Intergenic	novelGene_19369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTGCAGTTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	77229083	77235609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_77229100_77235600
ES.2361.1	chr10	+	3718	6	NIC	ENSMUSG00000015501.11	novel	9763	9	NA	NA	20	161	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.5298221281347	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTGTGTAGAGCTTG	9041	False	NA	NA	False	ATTAAA	-12	NA	13841838	14026494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13842442_13942326_13942429_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ES.2361.2	chr10	+	9059	10	NIC	ENSMUSG00000015501.11	novel	9846	10	NA	NA	-3	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	1.88561808316413	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTGATCTATATACTCA	9322	False	NA	NA	False	ATTAAA	-21	NA	13842119	14026335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_13842442_13879944_13880020_13942326_13942429_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ES.2361.3	chr10	+	9526	9	FSM	ENSMUSG00000015501.11	ENSMUST00000015645.11	9763	9	242	-5	-25	4	multi-exon	FALSE	canonical	0	0	junction_1	2.1650635094611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTAGTTCTTGTGTGTG	9567	False	NA	NA	False	AATAAA	-21	NA	13842364	14027122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_13842442_13942326_13942429_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ES.2361.4	chr10	+	9524	10	NNC	ENSMUSG00000015501.11	novel	2899	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.88561808316413	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGTGTCTAGTTCTTGT	9950	False	NA	NA	False	AATAAA	-16	NA	13842747	14027117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13842837_13879944_13880020_13942326_13942429_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015221_14017984_14018087_14018802_14019699_14024655
ES.2361.5	chr10	+	8891	11	NNC	ENSMUSG00000015501.11	novel	2899	4	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.4576411454889	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAACATGTTGATCTAT	9962	False	NA	NA	False	ATTAAA	-14	NA	13842759	14026328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_13842837_13942326_13942433_13991566_13991640_13993262_13993345_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ES.2361.6	chr10	+	196	1	Intergenic	novelGene_1806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAATCACTGCTTCATC	NA	False	NA	NA	False	NA	NA	NA	13937132	13937328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_13937100_13937300
ES.23610.1	chr4	+	4944	1	Intergenic	novelGene_19370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAGCTGAATCCTATA	NA	False	NA	NA	False	NA	NA	NA	77236078	77241022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_77236100_77241000
ES.23611.1	chr4	+	90	1	Intergenic	novelGene_19371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	77493073	77493163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_77493100_77493200
ES.23612.1	chr4	+	3949	1	Intergenic	novelGene_19372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTTGTTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	78431590	78435539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_78431600_78435500
ES.23613.1	chr4	-	178	1	Intergenic	novelGene_19373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGAAAGGGAAATA	NA	False	NA	NA	False	NA	NA	NA	79100578	79100400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_79100400_79100600
ES.23614.1	chr4	+	175	1	FSM	ENSMUSG00000083496.2	ENSMUST00000121853.2	749	1	614	-40	614	40	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	79246558	79246733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_79246600_79246700
ES.23615.1	chr4	-	173	1	Intergenic	novelGene_19374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79769353	79769180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_79769200_79769400
ES.23616.1	chr4	+	1741	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	1	1324	1	-1324	multi-exon	FALSE	canonical	3	28	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCGTGGTTTGTGGTGT	NA	False	NA	20	True	AATAAA	-22	NA	80828883	80872541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_80829883_80871799
ES.23616.2	chr4	+	1401	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	28	1637	28	-1637	multi-exon	FALSE	canonical	3	28	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTGCTATATTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	80828910	80872228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_80829883_80871799
ES.23616.3	chr4	+	3032	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	34	0	34	0	multi-exon	FALSE	canonical	3	28	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGGTGTTATATTTT	NA	False	NA	NA	False	ATTAAA	-2	NA	80828916	80873865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_80829883_80871799
ES.23617.1	chr4	+	182	1	Intergenic	novelGene_19375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAAATGGTTC	NA	False	NA	NA	False	NA	NA	NA	81345468	81345650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_81345500_81345600
ES.23618.10	chr4	-	7465	47	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	3.26984272642838	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAAGCAGATGCTGT	430	False	NA	NA	False	AATAAA	-19	NA	81361051	81196747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225030_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.11	chr4	-	6355	40	NNC	ENSMUSG00000028402.19	novel	7241	45	NA	NA	-20236	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	3.36611103271262	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAAGCAGATGCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	81301588	81196747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266991_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544
ES.23618.2	chr4	-	7418	46	NIC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-12	-2	combination_of_known_junctions	TRUE	canonical	1	2	junction_12	3.07679486912382	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGCTGTCTTTGTTTT	417	False	NA	NA	False	AATAAA	-28	NA	81361064	81196738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.3	chr4	-	9933	45	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_28	3.42171903537166	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGATGCTGTCTTTGT	417	False	NA	NA	False	AATAAA	-25	NA	81361064	81196741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274731_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302302_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.4	chr4	-	7259	45	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	3.21219268073723	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGATGCTGTCTTTGT	426	False	NA	NA	False	AATAAA	-25	NA	81361055	81196741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225030_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274735_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.5	chr4	-	7135	44	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.86188280240282	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGATGCTGTCTTTGT	421	False	NA	NA	False	AATAAA	-25	NA	81361060	81196741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274735_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.6	chr4	-	4882	29	NNC	ENSMUSG00000028402.19	novel	7241	45	NA	NA	2903	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	3.00424869211616	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCAGATGCTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	81278449	81196741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274735_81278240
ES.23618.7	chr4	-	7358	46	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	2.9455972586008	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGATGCTGTCTTTG	419	False	NA	NA	False	AATAAA	-24	NA	81361062	81196742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266928_81267238_81267515_81274566_81274735_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23618.8	chr4	-	7416	46	NNC	ENSMUSG00000028402.19	novel	7512	47	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.20154283794702	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCAGATGCTGTCTT	426	False	NA	NA	False	AATAAA	-22	NA	81361055	81196744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_81198007_81199937_81200062_81200893_81201020_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ES.23619.1	chr4	-	173	1	Intergenic	novelGene_19376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCAC	NA	False	NA	NA	False	NA	NA	NA	81366503	81366330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_81366300_81366500
ES.2362.1	chr10	-	4375	1	Intergenic	novelGene_1805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGAAAACTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	13855932	13851557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_13851600_13855900
ES.23620.1	chr4	+	3313	1	Intergenic	novelGene_19377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81727263	81730576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_81727300_81730600
ES.23621.1	chr4	+	178	1	Intergenic	novelGene_19378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCACAAGGCA	NA	False	NA	NA	False	NA	NA	NA	81873829	81874007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_81873800_81874000
ES.23622.1	chr4	+	2503	1	Intergenic	novelGene_19380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGGAAGGAAACCATCTG	NA	False	NA	NA	False	NA	NA	NA	82229955	82232458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_82230000_82232500
ES.23623.1	chr4	-	6627	1	ISM	ENSMUSG00000008575.18	ENSMUST00000050872.15	8770	12	208509	0	202517	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTCGTGTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	82215036	82208409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_82208400_82215000
ES.23623.10	chr4	-	2888	8	NIC	ENSMUSG00000008575.18	novel	3294	12	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	10.1196918562428	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGGGAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	82423930	82214284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82416474_82417007_82422967
ES.23623.11	chr4	-	3185	11	NIC	ENSMUSG00000008575.18	novel	3294	12	NA	NA	15	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	8.44037913840368	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAATAGGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82423929	82214289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82215049_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.12	chr4	-	2801	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	457	36	58	-3	multi-exon	FALSE	canonical	2	7	junction_3	7.01238573660978	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82423487	82214320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.13	chr4	-	4225	1	Intergenic	novelGene_19379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTACGTGTCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	82220745	82216520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_82216500_82220700
ES.23623.14	chr4	-	2754	8	FSM	ENSMUSG00000008575.18	ENSMUST00000122918.8	2699	8	-68	13	-68	-13	multi-exon	FALSE	canonical	3	16	junction_3	4.89064079103534	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAAAATGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	82423615	82245074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.15	chr4	-	790	2	NNC	ENSMUSG00000008575.18	novel	8770	12	NA	NA	115173	-30195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAATCTGGTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	82302380	82301483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82301738_82301844
ES.23623.16	chr4	-	5029	2	FSM	ENSMUSG00000008575.18	ENSMUST00000135024.2	3835	2	-54	-1140	-54	1140	multi-exon	FALSE	canonical	3	26	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82424070	82413080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82417007_82422967
ES.23623.17	chr4	-	10918	1	NIC	ENSMUSG00000008575.18	novel	9116	11	NA	NA	3	1140	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82423998	82413080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82413100_82424000
ES.23623.18	chr4	-	4094	2	NNC	ENSMUSG00000008575.18	novel	3835	2	NA	NA	-1448	1140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82425464	82413080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82417007_82425296
ES.23623.19	chr4	-	4347	3	NNC	ENSMUSG00000008575.18	novel	3835	2	NA	NA	-4	1140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGGACAGATTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	82424020	82413080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82417007_82422967_82423159_82423790
ES.23623.2	chr4	-	3314	1	ISM	ENSMUSG00000008575.18	ENSMUST00000050872.15	8770	12	210978	844	204986	-841	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGCAAAATGTTTACCAAA	NA	False	NA	NA	False	NA	NA	NA	82212567	82209253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_82209300_82212600
ES.23623.20	chr4	-	3532	3	NNC	ENSMUSG00000008575.18	novel	3835	2	NA	NA	8	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGCTTCTCTTTCTCCC	NA	False	NA	NA	False	AATAAA	-22	NA	82423993	82413868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82417007_82422967_82423159_82423790
ES.23623.21	chr4	-	3484	2	FSM	ENSMUSG00000008575.18	ENSMUST00000135024.2	3835	2	-137	488	-137	-488	multi-exon	FALSE	canonical	3	26	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAGGAAAAAAAAAG	NA	False	NA	NA	False	AATAGA	-30	NA	82424153	82414708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82417007_82422967
ES.23623.3	chr4	-	5676	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107247.8	3267	12	4	-2413	4	2413	multi-exon	FALSE	canonical	2	8	junction_3	6.85987253815036	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATTTAATAGTGAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	82423940	82211871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241808_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.4	chr4	-	4491	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	-9	-1188	-9	1188	multi-exon	FALSE	canonical	2	7	junction_3	7.01238573660978	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAATAATGTATGC	NA	False	NA	NA	False	NA	NA	NA	82423953	82213096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.5	chr4	-	3597	11	NIC	ENSMUSG00000008575.18	novel	8770	12	NA	NA	223	1014	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	8.44037913840368	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTTCAGTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	82423322	82213270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82215049_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.6	chr4	-	3656	1	NIC	ENSMUSG00000008575.18	novel	8770	12	NA	NA	199951	338	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTGAAAACACAGC	NA	False	NA	NA	False	NA	NA	NA	82217602	82213946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82213900_82217600
ES.23623.7	chr4	-	3034	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-476	5871	-5	1	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGGAAAAAAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	82424021	82214283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.8	chr4	-	3358	12	FSM	ENSMUSG00000008575.18	ENSMUST00000107247.8	3267	12	-90	-1	-18	1	multi-exon	FALSE	canonical	2	8	junction_3	6.85987253815036	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGGAAAAAAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	82424034	82214283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241808_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ES.23623.9	chr4	-	2830	10	NNC	ENSMUSG00000008575.18	novel	3294	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.94427190999916	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGGGAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	82424020	82214284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967_82423618_82423819
ES.23624.1	chr4	+	4782	1	Intergenic	novelGene_19381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTGTCTGGTTCTCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	82431630	82436412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_82431600_82436400
ES.23625.1	chr4	-	134	1	Intergenic	novelGene_19382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	82442628	82442494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_82442500_82442600
ES.23626.1	chr4	+	2498	1	Intergenic	novelGene_19383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAGATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82674447	82676945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_82674400_82676900
ES.23626.2	chr4	+	2596	1	Intergenic	novelGene_19384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCTTTAAATCTAGTG	NA	False	NA	NA	False	NA	NA	NA	82674546	82677142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_82674500_82677100
ES.23627.1	chr4	-	223	1	Intergenic	novelGene_19385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATCTGTAGATTGCT	4290	False	NA	NA	False	NA	NA	NA	82701614	82701391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_82701400_82701600
ES.23628.1	chr4	-	8855	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	36	-128	36	128	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTGGGCTCTTCTAC	NA	False	NA	NA	False	AATAAA	-14	NA	82777874	82716846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.10	chr4	-	2837	1	ISM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	53776	4323	44917	986	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATATTTAAAATGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	82724134	82721297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_82721300_82724100
ES.23628.11	chr4	-	3607	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	27	5129	27	180	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTACAGTTGCTGTG	NA	False	NA	NA	False	TATAAA	-37	NA	82777883	82722103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.12	chr4	-	3553	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	-65	5275	-65	34	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTGTACACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	82777975	82722249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.13	chr4	-	3450	10	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	34.2813342293326	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTGGTGATGTTCCT	NA	False	NA	NA	False	TATAAA	-36	NA	82777789	82722299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82766540_82766674_82772205_82772353_82777726
ES.23628.14	chr4	-	3730	10	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	-135	-20	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	34.5396533613322	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATTGTTGGTGATGT	NA	False	NA	NA	False	TATAAA	-32	NA	82778045	82722303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82775060_82775222_82777726
ES.23628.15	chr4	-	3396	9	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	3	-22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	39.319206502675	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTATTGTTGGTGAT	NA	False	NA	NA	False	TATAAA	-30	NA	82777907	82722305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82756512_82756625_82762340_82762440_82765779_82765977_82766567_82766674_82772205_82772353_82777726
ES.23628.16	chr4	-	3407	9	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	13	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.1761889217903	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTTATTGTTGGTG	NA	False	NA	NA	False	TATAAA	-28	NA	82777897	82722307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772343_82777726
ES.23628.17	chr4	-	3141	8	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	-12	-28	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	29.4950704978556	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATGTGTTATTGTT	NA	False	NA	NA	False	TATAAA	-24	NA	82777822	82722311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82772205_82772353_82777726
ES.23628.18	chr4	-	3257	9	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	-48	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.0600133344773	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATGTGTTATTGTT	NA	False	NA	NA	False	TATAAA	-24	NA	82777858	82722311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765896_82765977_82772205_82772353_82777726
ES.23628.19	chr4	-	3305	8	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	4	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.3141467724688	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATGTGTTATTGTT	NA	False	NA	NA	False	TATAAA	-24	NA	82777906	82722311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82724699_82725249_82725294_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.2	chr4	-	8832	9	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	-3301	120	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	34.2052627529741	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGTGGCCTTGGGC	NA	False	NA	NA	False	AATAAA	-6	NA	82772352	82716854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82766540_82766674_82772205
ES.23628.20	chr4	-	3283	8	FSM	ENSMUSG00000028403.16	ENSMUST00000173741.8	3203	8	-108	28	4	-28	multi-exon	FALSE	canonical	1	3	junction_3	30.5420419509013	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATGTGTTATTGTT	NA	False	NA	NA	False	TATAAA	-24	NA	82777906	82722311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.21	chr4	-	2534	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	15	6214	15	-905	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCATGTTCTAATTA	NA	False	NA	NA	False	TATAAA	-43	NA	82777895	82723188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.22	chr4	-	2171	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	123	6469	4	1002	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATTTTGTATGATTT	NA	False	NA	NA	False	NA	NA	NA	82777787	82723443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.23	chr4	-	2070	8	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	38	265	intron_retention	FALSE	canonical	3	63	junction_2	12.5095881594227	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGAATTTAATTCTTC	NA	False	NA	NA	False	NA	NA	NA	82777872	82724180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.24	chr4	-	4510	2	Intergenic	novelGene_19386	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATCCTCTCATCCTTTG	NA	False	NA	NA	False	NA	NA	NA	82731959	82727384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_82728339_82728403
ES.23628.25	chr4	-	179	1	Intergenic	novelGene_19387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTCTCGAGACA	NA	False	NA	NA	False	NA	NA	NA	82729701	82729522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_82729500_82729700
ES.23628.26	chr4	-	1762	7	ISM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	137	20688	18	-13217	5prime_fragment	FALSE	canonical	3	63	junction_1	11.7106314470608	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATACTAGAGTATCAAT	NA	False	NA	NA	False	NA	NA	NA	82777773	82737662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.27	chr4	-	1133	7	ISM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	15	21439	15	-13968	5prime_fragment	FALSE	canonical	3	63	junction_1	11.7106314470608	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAATGTGCAGAGTA	NA	False	NA	NA	False	CATAAA	-15	NA	82777895	82738413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.28	chr4	-	1374	1	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	15	-10668	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	82777895	82776521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82776500_82777900
ES.23628.3	chr4	-	8760	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	3	0	3	0	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTTTTTATCCTCTTA	NA	False	NA	-10	True	AATAAA	-18	NA	82777907	82716974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.4	chr4	-	8891	11	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	39.740281830908	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATGTTTTTATCCTCT	NA	False	NA	-12	True	AATAAA	-16	NA	82777868	82716976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82758157_82758224_82762340_82762440_82765779_82765977_82766567_82766674_82772205_82772353_82777726
ES.23628.5	chr4	-	8492	7	NIC	ENSMUSG00000028403.16	novel	3203	8	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.0179691078439	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATGTTTTTATCCTCT	NA	False	NA	-12	True	AATAAA	-16	NA	82777897	82716976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82724699_82725249_82725294_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.6	chr4	-	8596	8	NIC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	29.9564309473282	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGGAATGTTTTT	NA	False	NA	-19	True	AATAAA	-9	NA	82777899	82716983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82777726
ES.23628.7	chr4	-	5359	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	45	3359	45	1950	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTAGCTGTTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	82777865	82720333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23628.8	chr4	-	5445	10	NNC	ENSMUSG00000028403.16	novel	8763	9	NA	NA	29	1948	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.4247594239808	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATATTTAGCTGTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	82777881	82720335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82766540_82766613_82772205_82772353_82777726
ES.23628.9	chr4	-	4928	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	4	3831	4	1478	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	82777906	82720805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ES.23629.1	chr4	+	177	1	Intergenic	novelGene_19388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	82813952	82814129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_82814000_82814100
ES.2363.1	chr10	+	179	1	Intergenic	novelGene_1807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGCCCATAAATATAGG	NA	False	NA	NA	False	NA	NA	NA	14084782	14084961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_14084800_14085000
ES.23630.1	chr4	+	175	1	Intergenic	novelGene_19389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	83159615	83159790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83159600_83159800
ES.23631.1	chr4	+	4265	1	Antisense	novelGene_ENSMUSG00000038172.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGATCTAAATTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	83167849	83172114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_83167800_83172100
ES.23632.1	chr4	+	176	1	Intergenic	novelGene_19390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAATAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	83217734	83217910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83217700_83217900
ES.23633.1	chr4	+	3939	1	Intergenic	novelGene_19392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83230579	83234518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83230600_83234500
ES.23633.2	chr4	+	205	1	Intergenic	novelGene_19393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	83231912	83232117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83231900_83232100
ES.23634.1	chr4	+	2910	1	Antisense	novelGene_ENSMUSG00000038172.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTGTCTCTCAGACTA	NA	False	NA	NA	False	NA	NA	NA	83241620	83244530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_83241600_83244500
ES.23635.1	chr4	-	8886	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-47	-8	-47	8	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGATGTACATGTG	NA	False	NA	-4	True	AATAAA	-24	NA	83242539	83138528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.13	chr4	-	8607	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	-4	-163	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	56.8346095218941	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTTTCCTTTTCTTT	NA	False	NA	-30	True	AATAAA	-13	NA	83242496	83138699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.14	chr4	-	8581	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-15	265	-15	-265	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGCAGGTCCTGTTTC	NA	False	NA	NA	False	GATAAA	-19	NA	83242507	83138801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.15	chr4	-	8118	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	718	-5	-718	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACTCTTGTGATAATA	NA	False	NA	NA	False	AATACA	-25	NA	83242497	83139254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.16	chr4	-	6908	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-52	1975	-52	-1975	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAATTGAATTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	83242544	83140511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.17	chr4	-	6267	21	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	23	-1976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.1382580428508	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGAATTGAATTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	83242403	83140512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83144606_83145104_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.19	chr4	-	6851	20	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	24	-1980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	82.5963384458036	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGGTTGAATTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	83242402	83140516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164264_83164454_83164543_83164576_83165849_83165956_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.2	chr4	-	9130	20	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	-17905	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	56.2551074935741	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGTCTTCTATTTGAT	5662	False	NA	-13	True	AATAAA	-15	NA	83260397	83138537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83259912
ES.23635.20	chr4	-	6666	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	8	-1983	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	55.728757786662	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTACAGGTTGAATTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	83242418	83140519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83189353_83189456_83216164_83216200_83242307
ES.23635.21	chr4	-	5285	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	63	3483	-3	2636	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATCCTGGAATTATTCTG	NA	False	NA	NA	False	AGTAAA	-36	NA	83242429	83142019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.22	chr4	-	4640	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-33	4224	-33	1895	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAACGTTATCTAATCA	NA	False	NA	NA	False	TTTAAA	-44	NA	83242525	83142760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.23	chr4	-	4489	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-6	4348	-6	1771	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTATCTATTTTCTGTC	NA	False	NA	NA	False	AATAGA	-14	NA	83242498	83142884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.24	chr4	-	4296	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	66	4469	0	1650	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTGTGCTATTTTATT	NA	False	NA	NA	False	AATAAA	-39	NA	83242426	83143005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.25	chr4	-	4212	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	12	1643	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	56.8346095218941	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTACTTGTGCTA	NA	False	NA	NA	False	AATAAA	-32	NA	83242414	83143012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.26	chr4	-	4111	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-5	4725	-5	1394	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGTTTTAGAGACTGGA	NA	False	NA	NA	False	ATTAAA	-22	NA	83242497	83143261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.27	chr4	-	3543	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-33	5321	-33	798	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGGTCTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	83242525	83143857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.28	chr4	-	2999	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	106	5726	40	393	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATCAACGGCCTATCAAT	NA	False	NA	NA	False	AATATA	-26	NA	83242386	83144262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.29	chr4	-	3024	19	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	0	349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	56.7746520122414	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCCCATTAGAATATAG	NA	False	NA	NA	False	NA	NA	NA	83242476	83144306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83242293
ES.23635.3	chr4	-	8658	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	40	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	56.8346095218941	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGTCTTCTATTTGA	NA	False	NA	-14	True	AATAAA	-14	NA	83242386	83138538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.30	chr4	-	3039	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-37	5829	-37	290	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTAACTGTGAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	83242529	83144365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.32	chr4	-	2736	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-4	6099	-4	20	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGACTTCCATTGTG	NA	False	NA	NA	False	AATAAA	-43	NA	83242496	83144635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.34	chr4	-	2473	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-34	6392	-34	-273	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTGGGTTTCTGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	83242526	83144928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.35	chr4	-	2469	20	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	-47	-273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	55.8458503630313	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTGGGTTTCTGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	83242539	83144928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159958_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.36	chr4	-	2299	20	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	20	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.0462314112346	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATGACAGTGGGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	83242406	83144933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158353_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.37	chr4	-	6149	19	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	5	-422	intron_retention	FALSE	canonical	2	6	junction_1	55.8718772430877	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAATGTAAAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	83242421	83145077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83148762_83150200_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.38	chr4	-	2324	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-34	6541	-34	-422	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAATGTAAAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	83242526	83145077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.39	chr4	-	2697	21	NNC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	-4	-426	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	69.114018114996	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTTTTTAATGTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	83242496	83145081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83145462_83148644_83148762_83150200_83150608_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.41	chr4	-	1857	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	-59	6	-43	-6	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATCACAAATTCAATT	NA	False	NA	NA	False	AATAAA	-16	NA	83242535	83158052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.43	chr4	-	1477	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	-98	-537	-32	537	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTTATTTCCAGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	83242524	83176897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.44	chr4	-	941	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	-99	0	-33	0	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTCTATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	83242525	83177434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.45	chr4	-	2284	7	NNC	ENSMUSG00000038172.15	novel	842	7	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.7986946205542	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTAATGCTCTAT	NA	False	NA	NA	False	AATAAA	-8	NA	83242497	83177442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83178639_83178674_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.46	chr4	-	177	1	Intergenic	novelGene_19391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83222534	83222357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83222400_83222500
ES.23635.47	chr4	-	208	1	Intergenic	novelGene_19394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGATGTGTG	6522	False	NA	NA	False	NA	NA	NA	83259537	83259329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83259300_83259500
ES.23635.5	chr4	-	9891	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	6	-2	intron_retention	FALSE	canonical	3	157	junction_3	30.9667782958559	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGTCTTCTATTTGA	NA	False	NA	-14	True	AATAAA	-14	NA	83242420	83138538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.6	chr4	-	8275	1	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	4593	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTACAGTCTTCTATTTG	NA	False	NA	-15	True	AATAAA	-13	NA	83146814	83138539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83138500_83146800
ES.23635.8	chr4	-	8716	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	-43	158	-43	-158	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCTTTTCTTTGTCCC	NA	False	NA	-25	True	AATAAA	-18	NA	83242535	83138694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23635.9	chr4	-	13059	19	NIC	ENSMUSG00000038172.15	novel	8831	20	NA	NA	8	-161	intron_retention	FALSE	canonical	3	161	junction_2	29.17677073662	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTTCCTTTTCTTTGT	NA	False	NA	-28	True	AATAAA	-15	NA	83242468	83138697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83145462_83148644_83148762_83150947_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ES.23636.1	chr4	-	3110	1	Intergenic	novelGene_19395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAGCTTCATGTAGGAC	4287	False	NA	NA	False	NA	NA	NA	83280905	83277795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83277800_83280900
ES.23637.1	chr4	+	176	1	Intergenic	novelGene_19396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	83280945	83281121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83280900_83281100
ES.23638.1	chr4	-	3939	3	NNC	ENSMUSG00000086321.2	novel	1461	3	NA	NA	632	2209	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCTTCTTTTGTAT	8007	False	NA	NA	False	AATAAA	-13	NA	83308273	83294344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83297717_83307384_83307604_83307925
ES.23639.1	chr4	+	166	1	Intergenic	novelGene_19397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAATAACTGC	NA	False	NA	NA	False	NA	NA	NA	83313093	83313259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83313100_83313300
ES.2364.1	chr10	+	5194	1	Intergenic	novelGene_1810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAGCTACAACATCAG	873	False	NA	NA	False	TATAAA	-11	NA	14391968	14397162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_14392000_14397200
ES.23640.1	chr4	-	174	1	Intergenic	novelGene_19398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACAGAGTGAGCAGGGT	2295	False	NA	NA	False	NA	NA	NA	83313985	83313811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83313800_83314000
ES.23641.1	chr4	-	166	1	Intergenic	novelGene_19399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGTAGGTTCTGA	3020	False	NA	NA	False	NA	NA	NA	83321241	83321075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83321100_83321200
ES.23642.1	chr4	+	151	1	Intergenic	novelGene_19400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	83326985	83327136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83327000_83327100
ES.23643.1	chr4	+	255	1	Intergenic	novelGene_19401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	83327521	83327776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83327500_83327800
ES.23644.1	chr4	+	1436	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	-13	-18	-13	18	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTATGCATTCTGTAC	NA	False	NA	36	True	TATAAA	-36	NA	83335947	83371595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ES.23644.11	chr4	+	1278	5	NIC	ENSMUSG00000028483.14	novel	942	6	NA	NA	294	-3	intron_retention	FALSE	canonical	3	396	junction_2	20.0686322403895	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTTTCTAGTCCCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	83336279	83360320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ES.23644.12	chr4	+	221	1	Intergenic	novelGene_19402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAAAGAG	5086	False	NA	NA	False	NA	NA	NA	83347341	83347562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83347300_83347600
ES.23644.13	chr4	+	4143	2	FSM	ENSMUSG00000028483.14	ENSMUST00000130676.3	2405	2	-1801	63	-1801	-18	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAATCTGACTATTCA	NA	False	NA	NA	False	AAAACA	-22	NA	83380411	83385385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83384375_83385205
ES.23644.14	chr4	+	3113	1	NIC	ENSMUSG00000028483.14	novel	2710	12	NA	NA	149	18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTTGATTTTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	83382361	83385474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_83382400_83385500
ES.23644.2	chr4	+	952	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	-13	3	-6	-3	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTTTCTAGTCCCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	83335954	83360320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ES.23644.3	chr4	+	2096	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	2	-693	2	0	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCTGTTTAAAAGATT	NA	False	NA	NA	False	AATAAA	-13	NA	83335962	83372270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ES.23644.4	chr4	+	2990	8	NNC	ENSMUSG00000028483.14	novel	1405	9	NA	NA	1	-8	intron_retention	FALSE	canonical	2	5	junction_6	146.492181305602	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAACTTCTGATTCTT	NA	False	NA	10	True	TATAAA	-10	NA	83335968	83371569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368434_83368473_83369441
ES.23644.5	chr4	+	2603	12	NNC	ENSMUSG00000028483.14	novel	2710	12	NA	NA	3	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	194.964035674818	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTACATACATTTTAATT	NA	False	NA	NA	False	NA	NA	NA	83335970	83385362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368434_83368473_83369441_83369550_83371277_83372386_83378399_83378597_83384201_83384375_83385205
ES.23644.7	chr4	+	1245	9	NNC	ENSMUSG00000028483.14	novel	2617	11	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	137.083004052289	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGGAAACACAACTTCTGA	NA	False	NA	5	True	TATAAA	-5	NA	83335980	83371564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368434_83368473_83369441_83369550_83371277
ES.23644.8	chr4	+	2126	7	NNC	ENSMUSG00000028483.14	novel	2617	11	NA	NA	0	-3618	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	159.98194342557	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAAAAGTGTGGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	83335980	83367959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83361045_83367483
ES.23644.9	chr4	+	1412	10	NNC	ENSMUSG00000028483.14	novel	2617	11	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	131.411989982311	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTTGATTTTCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	83335980	83385474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277_83371577_83385446
ES.23645.1	chr4	-	2574	18	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	4	34185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	576.445179512067	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTATAAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	83404686	83339731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83340244_83342346_83342469_83375217_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.12	chr4	-	3907	2	FSM	ENSMUSG00000028484.17	ENSMUST00000152382.2	561	2	267	-3613	267	1218	multi-exon	FALSE	canonical	3	1107	junction_1	0	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAATGTTTATCTGTCA	NA	False	NA	-5	True	AATAAA	-17	NA	83378262	83372698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83376424_83378080
ES.23645.14	chr4	-	4413	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	29	1217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	496.344996505007	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAATGTTTATCTGTC	NA	False	NA	-6	True	AATAAA	-16	NA	83404661	83372699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379475_83381847_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.15	chr4	-	5174	6	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	23215	-1216	1720	1216	3prime_fragment	FALSE	canonical	3	958	junction_5	86.5503321772944	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAATGTTTATCTGT	8520	False	NA	-7	True	AATAAA	-15	NA	83381481	83372700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422
ES.23645.16	chr4	-	5924	6	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-66	1216	intron_retention	FALSE	canonical	3	958	junction_4	299.56862319008	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAATGTTTATCTGT	6655	False	NA	-7	True	AATAAA	-15	NA	83383346	83372700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83376311_83376424_83378080_83378493_83378695_83378767_83379422_83381951_83383161
ES.23645.17	chr4	-	4378	17	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	33	1216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.018861244136	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAATGTTTATCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	83404657	83372700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83374348_83374397_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.18	chr4	-	4405	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-43	-1111	-43	1111	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTAGCCTTTCTTCAT	NA	False	NA	-23	True	AGTAAA	-22	NA	83404739	83372805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.2	chr4	-	2241	17	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	7	22163	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	489.135905034327	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTATGTCTCGCTGG	NA	False	NA	NA	False	NA	NA	NA	83404683	83351753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83352058_83375217_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.21	chr4	-	4016	14	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	12	1109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	522.665743367538	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTAGCCTTTCTTC	NA	False	NA	-25	True	AGTAAA	-20	NA	83404678	83372807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.22	chr4	-	4089	17	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	24	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	490.018861244136	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGGCTAGCCTTTCTT	NA	False	NA	-26	True	AGTAAA	-19	NA	83404666	83372808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83374435_83374674_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.24	chr4	-	3995	12	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	24	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	479.610465218501	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGGCTAGCCTTTCTT	NA	False	NA	-26	True	AGTAAA	-19	NA	83404666	83372808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83394514_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.26	chr4	-	4244	17	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	33	1107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	490.018861244136	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	-27	True	AGTAAA	-18	NA	83404657	83372809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83374369_83374443_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.28	chr4	-	4209	15	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	31	1107	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	514.146950525522	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	-27	True	AGTAAA	-18	NA	83404659	83372809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.29	chr4	-	4301	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	31	1107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	501.513682099834	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTGGCTAGCCTTTCT	NA	False	NA	-27	True	AGTAAA	-18	NA	83404659	83372809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378715_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.3	chr4	-	2952	1	Intergenic	novelGene_19403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGCTTTCAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83359020	83356068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83356100_83359000
ES.23645.34	chr4	-	4014	17	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	23	1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	490.018861244136	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAACTTGGCTAGCCTT	NA	False	NA	-30	True	AGTAAA	-15	NA	83404667	83372812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83374417_83374728_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.36	chr4	-	4189	6	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-2000	1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	437.844995403625	1418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAACTTGGCTAGCCTT	9472	False	NA	-30	True	AGTAAA	-15	NA	83380529	83372812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378572_83378695_83378767_83379422
ES.23645.37	chr4	-	3461	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-208	-2	-208	2	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTAGTAAGTTATTATTA	NA	False	NA	-2	True	ATTAAA	-18	NA	83404904	83373914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.39	chr4	-	3106	15	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	514.146950525522	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404663	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.4	chr4	-	5674	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	37	-2460	31	2460	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTAAGCTGTAGTAGGA	NA	False	NA	NA	False	AATAAA	-15	NA	83404659	83371456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.40	chr4	-	6186	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	14067	0	-7349	0	3prime_fragment	FALSE	canonical	3	958	junction_5	364.387902117889	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83390629	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819
ES.23645.41	chr4	-	3102	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	492.52937193859	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404593	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381987_83383243_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.42	chr4	-	3247	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	492.52937193859	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404686	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381957_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.43	chr4	-	5599	15	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	958	junction_5	334.264750563663	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404691	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.45	chr4	-	3245	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	491.567135688391	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404697	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384951_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.46	chr4	-	3182	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	601.600916074953	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404640	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378494_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392612_83394524_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.48	chr4	-	3203	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	490.973246612164	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404659	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392525_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.5	chr4	-	5367	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	26	-2142	20	2142	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTTGTTTTAAATTT	NA	False	NA	NA	False	NA	NA	NA	83404670	83371774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.51	chr4	-	3213	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	599.733926189124	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404665	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378702_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400767_83403949_83404166_83404511
ES.23645.52	chr4	-	3282	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	496.344996505007	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404711	83373916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379495_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.54	chr4	-	4673	6	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	958	junction_4	299.56862319008	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTATTAGTAAGTTATT	6688	False	NA	-6	True	ATTAAA	-14	NA	83383313	83373918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83376311_83376424_83378080_83378493_83378695_83378767_83379422_83381951_83383161
ES.23645.56	chr4	-	3195	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.867822173854	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATTAGTAAGTTAT	NA	False	NA	-7	True	ATTAAA	-13	NA	83404657	83373919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375303_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.57	chr4	-	3028	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	496.868549573784	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATTAGTAAGTTAT	NA	False	NA	-7	True	ATTAAA	-13	NA	83404665	83373919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378160_83378444_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.59	chr4	-	3204	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	503.867822173854	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATTAGTAAGTTAT	NA	False	NA	-7	True	ATTAAA	-13	NA	83404648	83373919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375312_83376302_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.6	chr4	-	4880	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	10	-1639	4	1639	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTAAGCTTCATTGGT	NA	False	NA	NA	False	TTTAAA	-20	NA	83404686	83372277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.67	chr4	-	3210	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	501.513682099834	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTCTATTAGTAAGTT	NA	False	NA	-9	True	ATTAAA	-11	NA	83404667	83373921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378482_83378691_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.68	chr4	-	3208	16	NNC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	41	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	496.868549573784	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTCTATTAGTAAGTT	NA	False	NA	-9	True	ATTAAA	-11	NA	83404649	83373921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375317_83376311_83376424_83378080_83378304_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.69	chr4	-	4409	11	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	-9317	-6	intron_retention	FALSE	canonical	3	958	junction_5	372.613257949848	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACTCTATTAGTAAGT	NA	False	NA	-10	True	ATTAAA	-10	NA	83392597	83373922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83386914_83391276_83391340_83392514
ES.23645.7	chr4	-	4611	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-135	-1225	-135	1225	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATCTGTCATCTTTGT	NA	False	NA	2	True	AATAAA	-24	NA	83404831	83372691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.71	chr4	-	2228	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	27	996	21	-996	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACCGTGGGTTTTGTGC	NA	False	NA	NA	False	TATAAA	-9	NA	83404669	83374912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.72	chr4	-	1755	15	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	669	1173	388	-1173	3prime_fragment	FALSE	canonical	3	958	junction_5	357.903105117937	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCGTGTGCAGTATT	NA	False	NA	NA	False	AAGAAA	-36	NA	83404027	83375089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953
ES.23645.73	chr4	-	1848	12	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	31	522	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	619.236600131282	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAAAAAGGCAGGAAGA	NA	False	NA	NA	False	AAAAAG	-5	NA	83404659	83375789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83375798_83380129_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.74	chr4	-	4595	3	NNC	ENSMUSG00000028484.17	novel	1003	2	NA	NA	1332	-700	intron_retention	TRUE	non_canonical	0	0	junction_1	565.5	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCACAAAACAAAAACTTT	8132	False	NA	NA	False	NA	NA	NA	83381869	83377011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83377478_83377537_83378493_83378695
ES.23645.75	chr4	-	2558	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	-206	-379	-200	379	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTAATTTGTAGATCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	83404896	83379728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.76	chr4	-	1866	11	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	221	junction_1	470.836925060047	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404717	83380107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.77	chr4	-	1988	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	-15	0	-9	0	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404705	83380107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.78	chr4	-	3034	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-14	6191	-14	0	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404710	83380107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.81	chr4	-	1909	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	-11	0	-10	0	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404706	83380107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.82	chr4	-	1600	11	NIC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	-10	-10	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	512.655478854952	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404706	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83380412_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.83	chr4	-	6201	10	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	-3	-10	intron_retention	FALSE	canonical	3	221	junction_1	491.780915790561	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404699	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.84	chr4	-	2054	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	535.537711090452	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404686	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380886_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.86	chr4	-	1819	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	19	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.537711090452	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404671	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380666_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.89	chr4	-	7358	9	NIC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	9	-10	intron_retention	FALSE	canonical	3	1502	junction_8	121.73427773228	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404681	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.90	chr4	-	1949	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	25	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.537711090452	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	False	NA	84	True	AATAAA	-9	NA	83404665	83380117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380802_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.91	chr4	-	6292	10	NIC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	33	-11	intron_retention	FALSE	canonical	3	116	junction_1	523.924601115772	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404657	83380118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.92	chr4	-	1829	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	31	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	535.537711090452	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACCTGATTTT	NA	False	NA	83	True	AATAAA	-8	NA	83404659	83380118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380689_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.94	chr4	-	1705	11	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	24	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	641.314345699517	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTGGGGCAGGTGTG	NA	False	NA	-70	True	ATTAAA	-22	NA	83404666	83380271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400767_83403949_83404166_83404511
ES.23645.95	chr4	-	2643	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	47	6521	41	-330	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTTTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	83404649	83380437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.96	chr4	-	2481	10	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	-14	6744	-14	406	5prime_fragment	FALSE	canonical	3	1502	junction_9	115.542200082913	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTAATCCAGTAACT	NA	False	NA	NA	False	AATAAA	-22	NA	83404710	83380660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.97	chr4	-	1387	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	33	553	33	406	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTAATCCAGTAACT	NA	False	NA	NA	False	AATAAA	-22	NA	83404657	83380660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23645.98	chr4	-	1383	11	NNC	ENSMUSG00000028484.17	novel	1973	11	NA	NA	0	337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	535.537711090452	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTGTATTCCCAGC	NA	False	NA	NA	False	NA	NA	NA	83404695	83380729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_83380818_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ES.23646.1	chr4	-	136	1	Intergenic	novelGene_19404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83418667	83418531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83418500_83418700
ES.23647.1	chr4	-	126	1	FSM	ENSMUSG00000066116.4	ENSMUST00000084445.4	354	1	269	-41	269	41	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	83423506	83423380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_83423400_83423500
ES.23648.1	chr4	-	178	1	Intergenic	novelGene_19405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83434561	83434383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83434400_83434600
ES.23649.1	chr4	+	5853	26	FSM	ENSMUSG00000052407.18	ENSMUST00000231339.2	4549	26	3	-1307	3	1307	multi-exon	FALSE	canonical	1	1	junction_18	3.96666106442181	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCCGTCAAGATCCACC	8692	False	NA	NA	False	AATAAA	-17	NA	83443784	83784214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83713436_83713569_83736236_83736390_83782468
ES.23649.10	chr4	+	4045	2	Intergenic	novelGene_19407	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83477590	83481831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83481482_83481677
ES.23649.11	chr4	+	175	1	Intergenic	novelGene_19408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83481656	83481831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83481700_83481800
ES.23649.12	chr4	+	2407	1	Intergenic	novelGene_19413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTTAAAAACCTACCGA	NA	False	NA	NA	False	AATATA	-37	NA	83709559	83711966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83709600_83712000
ES.23649.2	chr4	+	1336	1	NIC	ENSMUSG00000052407.18	novel	4525	26	NA	NA	4	-28494	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTTAGTGTTAGGGAA	8693	False	NA	NA	False	AATGAA	-39	NA	83443785	83445121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_83443800_83445100
ES.23649.3	chr4	+	3717	20	ISM	ENSMUSG00000052407.18	ENSMUST00000125077.9	4231	25	-90	167913	4	-102004	5prime_fragment	FALSE	canonical	1	1	junction_9	4.19668778510517	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTTTTTTAAAAGTTT	8693	False	NA	NA	False	AATACA	-19	NA	83443785	83614909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487
ES.23649.4	chr4	+	909	6	NNC	ENSMUSG00000052407.18	novel	4231	25	NA	NA	34	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.46838465151849	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTATGTGTGGTTTTTT	8723	False	NA	NA	False	AATAAA	-6	NA	83443815	83473608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83473541
ES.23649.5	chr4	+	4345	26	FSM	ENSMUSG00000052407.18	ENSMUST00000231339.2	4549	26	46	158	-23	-73	multi-exon	FALSE	canonical	1	1	junction_18	3.96666106442181	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTATCAGTTGAGT	8735	False	NA	NA	False	ATTAAA	-16	NA	83443827	83782749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83713436_83713569_83736236_83736390_83782468
ES.23649.6	chr4	+	2630	6	NNC	ENSMUSG00000052407.18	novel	4231	25	NA	NA	-21	5359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.46838465151849	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCAGCCTCTGGTGTAG	8737	False	NA	NA	False	NA	NA	NA	83443829	83482437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83480635
ES.23649.7	chr4	+	4036	24	ISM	ENSMUSG00000052407.18	ENSMUST00000231339.2	4549	26	51	69209	-18	-3215	5prime_fragment	FALSE	canonical	1	1	junction_18	3.95245849647426	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCATAAAAACACGTTTC	8740	False	NA	NA	False	AATAAA	-14	NA	83443832	83713698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83713436
ES.23649.8	chr4	+	5707	24	NIC	ENSMUSG00000052407.18	novel	4549	26	NA	NA	-17	1474	combination_of_known_splicesites	TRUE	canonical	0	0	junction_22	4.29313427350685	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTAATTCTTTTTTTA	8741	False	NA	NA	False	AGTAAA	-18	NA	83443833	83784381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83736236_83736390_83782468
ES.23649.9	chr4	+	6428	8	NNC	ENSMUSG00000052407.18	novel	4231	25	NA	NA	-16	5359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.20827189231021	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCAGCCTCTGGTGTAG	8742	False	NA	NA	False	NA	NA	NA	83443834	83482437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476138_83476268_83476765_83481482_83481677
ES.2365.1	chr10	+	529	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	-13	-48	-13	48	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATTAA	7713	False	NA	NA	False	AATATA	-16	NA	14398808	14399337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_14398800_14399300
ES.23650.1	chr4	-	157	1	Intergenic	novelGene_19406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	83448630	83448473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83448500_83448600
ES.23651.1	chr4	-	2285	1	Intergenic	novelGene_19409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	390	False	NA	NA	False	NA	NA	NA	83486077	83483792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83483800_83486100
ES.23652.1	chr4	-	176	1	Intergenic	novelGene_19410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGGGGGATAATT	NA	False	NA	NA	False	NA	NA	NA	83504965	83504789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83504800_83505000
ES.23653.1	chr4	-	180	1	Intergenic	novelGene_19411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTCTACCAC	NA	False	NA	NA	False	NA	NA	NA	83547325	83547145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83547100_83547300
ES.23654.1	chr4	-	2546	1	Intergenic	novelGene_19412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83694393	83691847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_83691800_83694400
ES.23655.1	chr4	+	2150	1	Intergenic	novelGene_19414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATTAAATA	NA	False	NA	NA	False	NA	NA	NA	83786219	83788369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_83786200_83788400
ES.23656.1	chr4	-	2363	1	Intergenic	novelGene_19415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	TATAAA	-25	NA	84190838	84188475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_84188500_84190800
ES.23657.1	chr4	+	1730	1	Intergenic	novelGene_19416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGAGTTCCAGAATTC	NA	False	NA	NA	False	NA	NA	NA	84300458	84302188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_84300500_84302200
ES.23658.1	chr4	+	2754	1	Intergenic	novelGene_19418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAATATTTTCACTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	84543113	84545867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_84543100_84545900
ES.23659.1	chr4	-	4126	7	NIC	ENSMUSG00000028487.19	novel	4133	8	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	4.56131072780134	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	84593313	84193331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_84194679_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593170
ES.23659.2	chr4	-	4319	9	NNC	ENSMUSG00000028487.19	novel	4133	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.8589479313942	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	84593343	84193331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_84194685_84209929_84211900_84291270_84291385_84309125_84309362_84332482_84332586_84424764_84424849_84464441_84464643_84474015_84474142_84593211
ES.23659.3	chr4	-	4062	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	-22	-92	-3	-42	multi-exon	FALSE	canonical	1	4	junction_2	2.98142396999972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTATTCATTTTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	84593326	84193373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
ES.23659.4	chr4	-	3745	7	NIC	ENSMUSG00000028487.19	novel	4133	8	NA	NA	-3	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.01732359773132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	AATAAA	-37	NA	84593326	84193573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84424764_84424849_84474015_84474142_84593211
ES.23659.5	chr4	-	3899	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	-59	108	-40	15	multi-exon	FALSE	canonical	1	4	junction_2	2.98142396999972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	AATAAA	-37	NA	84593363	84193573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
ES.23659.6	chr4	-	3910	8	NIC	ENSMUSG00000028487.19	novel	3948	7	NA	NA	-17	15	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.84999104903714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTCTTACAGTTGTCT	NA	False	NA	NA	False	AATAAA	-37	NA	84593340	84193573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_84194685_84196142_84196177_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
ES.23659.7	chr4	-	2903	1	Intergenic	novelGene_19417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACACTCTTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	84456317	84453414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_84453400_84456300
ES.2366.1	chr10	+	538	2	NNC	ENSMUSG00000111888.2	novel	1003	2	NA	NA	71	331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTACGCCTATTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	14420304	14427106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_14420374_14426637
ES.2366.2	chr10	+	653	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	681	-331	681	331	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTACGCCTATTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	14420914	14427106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_14421099_14426637
ES.23660.1	chr4	+	5468	25	NIC	ENSMUSG00000038070.16	novel	5528	26	NA	NA	-34	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.67673879105817	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCGGTGATGCTCA	NA	False	NA	NA	False	NA	NA	NA	84802511	85050149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_84803062_84806879_84806969_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981414_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ES.23660.2	chr4	+	5150	26	NNC	ENSMUSG00000038070.16	novel	5528	26	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.80741874325865	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTCATTCCTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	84802518	85050160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_84802658_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981417_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ES.23660.3	chr4	+	5472	26	FSM	ENSMUSG00000038070.16	ENSMUST00000047023.13	5528	26	53	3	-42	0	multi-exon	FALSE	canonical	0	0	junction_2	2.67910432794246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTGATGCTCATTCCTT	NA	False	NA	NA	False	NA	NA	NA	84802598	85050155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981414_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ES.23660.4	chr4	+	4831	26	FSM	ENSMUSG00000038070.16	ENSMUST00000047023.13	5528	26	83	614	-12	-610	multi-exon	FALSE	canonical	0	0	junction_2	2.67910432794246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTGTGCAGTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	84802628	85049544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981414_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ES.23660.5	chr4	+	1364	9	NNC	ENSMUSG00000038070.16	novel	5528	26	NA	NA	-30612	-13363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.45236875482778	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAAATACCGCCAGCCT	NA	False	NA	NA	False	ATTAAA	-6	NA	84985728	85036791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019155_85033501_85033688_85036678
ES.23660.6	chr4	+	2262	1	Intergenic	novelGene_19419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85021237	85023499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_85021200_85023500
ES.23660.7	chr4	+	1810	4	NNC	ENSMUSG00000038070.16	novel	5528	26	NA	NA	5545	-610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTGTGCAGTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	85021885	85049544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85022766_85033501_85033688_85036678_85036757_85048878
ES.23661.1	chr4	+	3147	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-325	0	-10	0	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123352	85307617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.10	chr4	+	7367	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	12	-4557	12	4557	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCTCTGTTCATCAAG	NA	False	NA	NA	False	NA	NA	NA	85123689	85312174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.11	chr4	+	2611	10	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-11	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	108.958141243369	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTTCCACTCCAGT	NA	False	NA	34	True	NA	NA	NA	85123694	85307312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299389_85299501_85299641_85299746_85304026_85304158_85305790
ES.23661.12	chr4	+	2570	7	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.964952540633	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGAGGCTTCTGCTTCT	NA	False	NA	25	True	AATAAA	-15	NA	85123695	85307614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85294577_85294722_85295719_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.13	chr4	+	2842	9	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.5237398682606	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAACAGAGGCTTCTGCTT	NA	False	NA	23	True	AATAAA	-13	NA	85123715	85307612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85265360_85265430_85273563_85273660_85294537_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.14	chr4	+	3801	1	Intergenic	novelGene_19421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85177543	85181344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_85177500_85181300
ES.23661.15	chr4	+	2679	9	NNC	ENSMUSG00000028488.16	novel	706	6	NA	NA	56917	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.9138476542963	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGAGGCTTCTGCTTCT	NA	False	NA	25	True	AATAAA	-15	NA	85180688	85307614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85180730_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.16	chr4	+	4128	3	NNC	ENSMUSG00000028488.16	novel	2286	12	NA	NA	7233	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAACAGAGGCTTCTGCT	NA	False	NA	22	True	AATAAA	-12	NA	85301810	85307611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85303342_85303381_85304158_85305790
ES.23661.2	chr4	+	2810	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	-315	327	0	-327	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATGTGGCTGCATATG	NA	False	NA	12	True	AATAAA	-25	NA	85123362	85307290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.3	chr4	+	4610	8	NIC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-64	0	intron_retention	FALSE	canonical	3	246	junction_4	16.9957977999605	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123613	85307617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.4	chr4	+	4227	8	NIC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	-332	intron_retention	FALSE	canonical	3	246	junction_4	16.9957977999605	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAAGGTATGTGGCTGC	NA	False	NA	7	True	AATAAA	-20	NA	85123664	85307285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.5	chr4	+	4015	9	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.3727523925215	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGAGGCTTCTGCTTCT	NA	False	NA	25	True	AATAAA	-15	NA	85123664	85307614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85296305_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.7	chr4	+	2758	8	NIC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	95.2326903228217	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGAGGCTTCTGCTTC	NA	False	NA	24	True	AATAAA	-14	NA	85123664	85307613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_85123859_85265360_85265430_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.8	chr4	+	4178	9	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	-303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.3727523925215	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTTCCACTCCAGTCA	NA	False	NA	36	True	NA	NA	NA	85123664	85307314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85297411_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23661.9	chr4	+	2917	10	NNC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	112.833976145661	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123664	85307617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85296305_85296388_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ES.23662.1	chr4	-	2756	1	Intergenic	novelGene_19420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85180161	85177405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_85177400_85180200
ES.23663.1	chr4	-	4101	1	Intergenic	novelGene_19422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTAGTCACGGATGT	NA	False	NA	NA	False	NA	NA	NA	85210193	85206092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_85206100_85210200
ES.23664.1	chr4	-	177	1	Intergenic	novelGene_19423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGCCATAATGAAT	NA	False	NA	NA	False	NA	NA	NA	85254402	85254225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_85254200_85254400
ES.23665.1	chr4	+	177	1	Intergenic	novelGene_19424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAGAAGTTAG	NA	False	NA	NA	False	NA	NA	NA	85681790	85681967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_85681800_85682000
ES.23666.1	chr4	+	5642	1	Intergenic	novelGene_19425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	86012192	86017834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_86012200_86017800
ES.23667.1	chr4	-	187	1	Intergenic	novelGene_19426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTGTTTCTGATG	NA	False	NA	NA	False	NA	NA	NA	86103483	86103296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86103300_86103500
ES.23668.1	chr4	+	4930	1	Intergenic	novelGene_19427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86174561	86179491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_86174600_86179500
ES.23669.1	chr4	-	3597	3	Antisense	novelGene_ENSMUSG00000066113.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTCACTGATGTGTGA	NA	False	NA	NA	False	TATAAA	-16	NA	86261160	86182303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_86185009_86257219_86257331_86260379
ES.23669.2	chr4	-	2104	1	Intergenic	novelGene_19428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCAGAGCCTTGTATA	NA	False	NA	NA	False	AATAAA	-21	NA	86214338	86212234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86212200_86214300
ES.2367.1	chr10	-	5131	26	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-164	189465	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5861437037744	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGCTATGTTGAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	14421087	14088861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14088882_14280067_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.10	chr10	-	5846	21	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	76209	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.7415534227787	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14344530	14278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281179_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14342876_14343501_14344506
ES.2367.11	chr10	-	6805	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_24	21.1433188160127	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14421053	14278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.2367.13	chr10	-	6794	23	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	215	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	22.1708243993194	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATTATTCAGTTCCTT	NA	False	NA	-8	True	AATAAA	-19	NA	14421188	14278332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.14	chr10	-	6910	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-151	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	21.8307488928397	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCCAAATTATTCAGTT	NA	False	NA	-12	True	AATAAA	-15	NA	14421074	14278336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420576
ES.2367.15	chr10	-	6905	26	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-183	-12	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	26.6923209931246	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCCAAATTATTCAG	NA	False	NA	-14	True	AATAAA	-13	NA	14421106	14278338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.16	chr10	-	6145	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-183	-726	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGCTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	14421106	14279052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.17	chr10	-	5502	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-53	260	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421456	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.18	chr10	-	5361	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-619	-260	4	260	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421399	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.19	chr10	-	4305	21	NNC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-183	260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4585729733659	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421106	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281103_14302610_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.2	chr10	-	170	1	Intergenic	novelGene_1808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTGAACAAGCAAATT	NA	False	NA	NA	False	NA	NA	NA	14136885	14136715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14136700_14136900
ES.2367.20	chr10	-	5427	26	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	68	260	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	26.6923209931246	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421335	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.21	chr10	-	5220	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	216	260	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_24	21.1433188160127	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421187	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.2367.22	chr10	-	5114	25	FSM	ENSMUSG00000039116.8	ENSMUST00000041168.6	6507	25	-326	1719	-183	260	multi-exon	FALSE	canonical	2	3	junction_1	30.3030698389894	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421106	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.25	chr10	-	4910	23	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-94	260	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	22.1708243993194	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421017	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.27	chr10	-	5190	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-140	260	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	21.8307488928397	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421063	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420576
ES.2367.28	chr10	-	3593	3	ISM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	132278	-260	132237	260	3prime_fragment	FALSE	canonical	3	99	junction_2	2	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14288502	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_14281183_14285416_14285570_14286199
ES.2367.3	chr10	-	10866	3	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	140921	10537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGCCCTGCACTTCAC	NA	False	NA	NA	False	NA	NA	NA	14279818	14267789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14270461_14271541_14272773_14272854
ES.2367.30	chr10	-	4850	22	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-118	260	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	27.1115943602149	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421041	14280045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.31	chr10	-	5012	24	NNC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-151	249	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_23	25.8181073897206	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACATTCCA	NA	False	NA	-12	True	NA	NA	NA	14421074	14280056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.2367.32	chr10	-	5147	24	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	181	246	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	22.0723162707872	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAAAAAAAGACATT	NA	False	NA	-15	True	TTTAAA	-44	NA	14421222	14280059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.33	chr10	-	4756	23	NIC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-170	30	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	22.1708243993194	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGCACATAAGCCAATCCA	NA	False	NA	NA	False	NA	NA	NA	14421093	14280275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.34	chr10	-	4896	26	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-173	-32	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	26.6923209931246	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATCCATTGTGTGAATC	NA	False	NA	NA	False	NA	NA	NA	14421096	14280337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14283609_14283656_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.35	chr10	-	5048	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	104	-37	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGTCAATCCATTGTGT	NA	False	NA	NA	False	NA	NA	NA	14421299	14280342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.36	chr10	-	4722	24	NNC	ENSMUSG00000039116.8	novel	4482	24	NA	NA	-155	-45	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_23	25.8181073897206	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTGATCTAGTCAATC	NA	False	NA	NA	False	NA	NA	NA	14421078	14280350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.2367.37	chr10	-	4878	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-488	92	135	-92	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATATTGAATATTCATG	NA	False	NA	NA	False	ATTAAA	-23	NA	14421268	14280397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.38	chr10	-	4675	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-80	-97	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	27.5560035805872	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGCAAATATTGAATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	14421003	14280402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281179_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.2367.4	chr10	-	5931	3	Intergenic	novelGene_1809	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGCCCTGCACTTCA	NA	False	NA	NA	False	NA	NA	NA	14274883	14267790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14270452_14271531_14272773_14272854
ES.2367.44	chr10	-	5033	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-13	-169	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTCAACCATAAGTAG	NA	False	NA	NA	False	AATATA	-24	NA	14421416	14280474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.45	chr10	-	3796	22	NNC	ENSMUSG00000039116.8	novel	5121	2	NA	NA	-101	-6104	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.3643427883044	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTATCTTTGAACTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	14421024	14289745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14289948_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.46	chr10	-	4664	22	ISM	ENSMUSG00000039116.8	ENSMUST00000208429.3	4326	25	213	11708	213	-11708	5prime_fragment	FALSE	canonical	3	71	junction_17	11.5654501506949	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCCTCATTCATGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	14421190	14295349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.47	chr10	-	4444	21	ISM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-298	15068	-155	-11732	5prime_fragment	FALSE	canonical	3	20	junction_16	19.6312888012988	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTGGTGCTGAAGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	14421078	14295373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.48	chr10	-	3194	4	ISM	ENSMUSG00000039116.8	ENSMUST00000208429.3	4326	25	151	57703	151	25178	5prime_fragment	FALSE	canonical	3	97	junction_3	9.8770215933527	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGATGTTTATTGTCAA	NA	False	NA	NA	False	NA	NA	NA	14421252	14341344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.49	chr10	-	5412	2	FSM	ENSMUSG00000039116.8	ENSMUST00000207953.2	5121	2	-302	11	-118	-11	multi-exon	FALSE	canonical	3	97	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAGCCACTTATGTC	NA	False	NA	NA	False	TATAAA	-8	NA	14421041	14406670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14411699_14420657
ES.2367.5	chr10	-	6994	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-530	-1982	93	3	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTCCTTTATGAGGGA	NA	False	NA	1	True	AATAAA	-28	NA	14421310	14278323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.6	chr10	-	6957	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	211	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14421192	14278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ES.2367.8	chr10	-	6527	24	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_23	25.8181073897206	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14420859	14278326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
ES.23670.1	chr4	+	1634	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	-19	3	-19	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGTTTGAAATAATT	NA	False	NA	16	True	AATAAA	-16	NA	86493885	86495519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86493900_86495500
ES.23670.2	chr4	+	1478	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	20	120	20	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTGTATTATCAGAT	NA	False	NA	-69	True	ATTAAA	-6	NA	86493924	86495402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86493900_86495400
ES.23671.1	chr4	+	5716	13	Antisense	novelGene_ENSMUSG00000088958.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	86503586	86528152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_86503698_86503996_86504182_86504548_86504617_86507221_86507304_86511828_86511931_86512976_86513107_86513601_86513794_86517495_86517665_86518985_86519037_86519459_86519528_86521056_86521201_86522393_86522531_86523875
ES.23671.2	chr4	+	2542	2	Antisense	novelGene_ENSMUSG00000088958.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	86503586	86506495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_86504182_86504548
ES.23671.3	chr4	+	3110	14	Antisense	novelGene_ENSMUSG00000088958.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGGAAGAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86503586	86527725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_86503698_86503996_86504182_86504548_86504617_86507221_86507304_86511828_86511931_86512976_86513107_86513601_86513794_86517495_86517665_86518985_86519037_86519459_86519528_86521056_86521201_86522393_86522531_86523875_86523953_86526131
ES.23671.4	chr4	+	3559	14	Antisense	novelGene_ENSMUSG00000088958.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAGAAAAACAAAAAGAT	NA	False	NA	NA	False	AAAACA	-5	NA	86503586	86528176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_86503700_86503999_86504182_86504548_86504617_86507221_86507304_86511828_86511931_86512976_86513107_86513601_86513794_86517495_86517668_86518989_86519037_86519459_86519528_86521056_86521201_86522393_86522531_86523875_86523953_86526131
ES.23671.5	chr4	+	2914	1	Antisense	novelGene_ENSMUSG00000088958.3_AS_novelGene_ENSMUSG00000038047.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	86503586	86506500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_86503600_86506500
ES.23672.1	chr4	-	4804	12	Fusion	ENSMUSG00000083272.2_ENSMUSG00000028492.14	novel	1892	4	NA	NA	-728	20432	multi-exon	FALSE	non_canonical	0	0	junction_1	1.19226154987309	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCACCCTCTCCTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	86477293	86339817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_86340122_86340927_86341085_86358478_86358574_86358909_86359046_86359157_86359259_86360242_86360812_86361409_86361526_86361846_86364055_86397109_86397316_86405976_86406157_86476211_86476304_86476653
ES.23672.11	chr4	-	5997	16	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	66.9153362258774	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCCTGTATTTCAAAA	NA	False	NA	-1	True	AATAAA	-22	NA	86530254	86497085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519455_86519526_86521055_86521201_86523873_86523953_86526131_86526228_86529922
ES.23672.12	chr4	-	7484	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-15	0	intron_retention	FALSE	canonical	3	127	junction_2	21.6809183897321	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530271	86497091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86523953_86526131_86526228_86529922
ES.23672.13	chr4	-	5995	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.24017778387	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530265	86497091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500273_86501111_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.14	chr4	-	5969	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGGAATTCCCTGTA	NA	False	NA	-9	True	AATAAA	-14	NA	86530264	86497093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.17	chr4	-	6139	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	15	4	9	-4	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTGGAATTCCCTG	NA	False	NA	-11	True	AATAAA	-12	NA	86530277	86497095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.18	chr4	-	3338	5	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	25634	-1052	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	82.3377191814298	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTAGGATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	86504622	86498143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549
ES.23672.19	chr4	-	4003	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	-1	2156	-1	-2156	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTCCTAGTCTGTGAA	NA	False	NA	-10	True	NA	NA	NA	86530293	86499247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.2	chr4	-	1772	3	NIC	ENSMUSG00000028492.14	novel	1716	4	NA	NA	-43	219	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTAGGTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	86457397	86362658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86364055_86405976_86406157_86457201
ES.23672.21	chr4	-	3885	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-15	-2179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	50.1098792654702	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCACTAACGGTTGATTT	NA	False	NA	-33	True	AATAAA	-30	NA	86530271	86499270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526155_86529922
ES.23672.22	chr4	-	3818	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-2	-2181	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_15	61.399180572708	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCACTAACGGTTGAT	NA	False	NA	-35	True	AATAAA	-28	NA	86530294	86499272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523951_86526131_86526228_86529922
ES.23672.23	chr4	-	4085	18	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-15	-2181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.6616111239611	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCACTAACGGTTGAT	NA	False	NA	-35	True	AATAAA	-28	NA	86530271	86499272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86506976_86507106_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.24	chr4	-	3631	16	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	0	-2181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	64.3230043521669	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCACTAACGGTTGAT	NA	False	NA	-35	True	AATAAA	-28	NA	86530256	86499272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521183_86523873_86523953_86526131_86526228_86529922
ES.23672.25	chr4	-	4037	18	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-8	-2182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.0012906991419	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGCACTAACGGTTGA	NA	False	NA	-36	True	AATAAA	-27	NA	86530264	86499273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86525487_86525577_86526131_86526228_86529922
ES.23672.28	chr4	-	5418	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	2	-2186	intron_retention	FALSE	canonical	3	135	junction_13	20.3091659656969	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAAGAGGCACTAACGG	NA	False	NA	-40	True	AATAAA	-23	NA	86530284	86499277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.29	chr4	-	3810	16	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	4	-2187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	50.9603767646983	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGAAGAGGCACTAACG	NA	False	NA	-41	True	AATAAA	-22	NA	86530282	86499278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521183_86523873_86523953_86526131_86526228_86529922
ES.23672.3	chr4	-	1953	4	FSM	ENSMUSG00000028492.14	ENSMUST00000151481.8	1716	4	-18	-219	-18	219	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTAGGTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	86457372	86362658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86364055_86397109_86397316_86405976_86406157_86457201
ES.23672.31	chr4	-	3761	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	28	-2188	combination_of_known_splicesites	TRUE	canonical	0	0	junction_12	51.2702642864263	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTAGAAGAGGCACTAAC	NA	False	NA	-42	True	AATAAA	-21	NA	86530228	86499279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.32	chr4	-	4020	18	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-8	-2188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	62.8520534496477	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTAGAAGAGGCACTAAC	NA	False	NA	-42	True	AATAAA	-21	NA	86530264	86499279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86524852_86524931_86526131_86526228_86529922
ES.23672.33	chr4	-	3864	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	28	2266	-8	-2266	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCGTATGTTTTTGCCTC	NA	False	NA	-120	True	NA	NA	NA	86530264	86499357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.38	chr4	-	4557	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-2	-2429	intron_retention	FALSE	canonical	3	127	junction_1	23.1443777670134	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTACCATTGTGGTC	NA	False	NA	-10	True	TATAAA	-16	NA	86530258	86499520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.39	chr4	-	5184	16	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-1	-2429	intron_retention	FALSE	canonical	3	135	junction_13	20.3091659656969	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTACCATTGTGGTC	NA	False	NA	-10	True	TATAAA	-16	NA	86530293	86499520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.4	chr4	-	2046	5	NNC	ENSMUSG00000028492.14	novel	1716	4	NA	NA	-7	217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.4790199457749	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTAGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86457361	86362660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86364055_86397109_86397316_86405976_86406157_86430379_86430486_86457201
ES.23672.41	chr4	-	4680	13	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-8	-2432	intron_retention	FALSE	canonical	0	0	junction_10	70.7854249749826	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTACCATTGTG	NA	False	NA	-13	True	TATAAA	-13	NA	86530264	86499523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86517495_86517667_86518987_86519037_86519459_86519526_86523873_86523953_86526131_86526228_86529922
ES.23672.42	chr4	-	3564	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	3	-2432	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTACCATTGTG	NA	False	NA	-13	True	TATAAA	-13	NA	86530289	86499523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.43	chr4	-	3774	18	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-6	-2432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	62.8520534496477	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTACCATTGTG	NA	False	NA	-13	True	TATAAA	-13	NA	86530262	86499523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86524852_86524931_86526131_86526228_86529922
ES.23672.44	chr4	-	5220	6	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	20841	-2432	intron_retention	FALSE	non_canonical	0	0	junction_5	80.4402884132075	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTACCATTGTG	NA	False	NA	-13	True	TATAAA	-13	NA	86509415	86499523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86503701_86503999_86504183_86504549_86504617_86507221_86508697_86509235
ES.23672.46	chr4	-	8081	12	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	5328	-2434	intron_retention	FALSE	canonical	3	164	junction_11	17.606816861659	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTGTTTTACCATTG	NA	False	NA	-15	True	TATAAA	-11	NA	86524928	86499525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86500256_86501117_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393
ES.23672.47	chr4	-	3381	16	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-4	-2435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	64.3230043521669	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTGTTTTACCATT	NA	False	NA	-16	True	TATAAA	-10	NA	86530260	86499526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521183_86523873_86523953_86526131_86526228_86529922
ES.23672.49	chr4	-	3441	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	-9	2726	-9	-2726	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATATTCTGGTAATAAC	NA	False	NA	NA	False	AATAAA	-20	NA	86530301	86499817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.5	chr4	-	3413	18	Fusion	ENSMUSG00000028492.14_ENSMUSG00000038047.19	novel	2302	15	NA	NA	-15	294	multi-exon	TRUE	canonical	0	0	junction_1	70.4456894047417	270	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGAATCTTTTGTCCGG	NA	False	NA	NA	False	AATAAA	-19	NA	86530271	86399491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_86399911_86405976_86406157_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.50	chr4	-	3239	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-4	-2728	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATATTCTGGTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	86530260	86499819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.51	chr4	-	4361	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	0	-2733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.3323327771842	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAATGGAATATTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	86530286	86499824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500258_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86523467_86523873_86523953_86526131_86526228_86529922
ES.23672.52	chr4	-	3236	16	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	2	-2733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	50.9603767646983	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAATGGAATATTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	86530254	86499824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521183_86523873_86523953_86526131_86526228_86529922
ES.23672.53	chr4	-	2245	15	FSM	ENSMUSG00000038047.19	ENSMUST00000128381.8	2302	15	5	52	-1	-52	multi-exon	FALSE	canonical	3	135	junction_12	19.1012340663409	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTAGTTGTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	86530287	86503315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.54	chr4	-	1903	1	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	-7	-4487	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	86530263	86528360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86528400_86530300
ES.23672.6	chr4	-	4572	12	NNC	ENSMUSG00000038047.19	novel	2302	15	NA	NA	2	5938	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6821406532117	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGTCTTACTATCTAG	NA	False	NA	NA	False	NA	NA	NA	86530284	86491153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86494186_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86529922
ES.23672.7	chr4	-	4815	17	NNC	ENSMUSG00000038047.19	novel	2302	15	NA	NA	2	4471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.8383414311952	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGAAGGCTCACAAGCA	NA	False	NA	NA	False	NA	NA	NA	86530284	86492620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86494450_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23672.9	chr4	-	6292	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	-37	-97	-37	97	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATACAGGTAAGAGTT	NA	False	NA	90	True	NA	NA	NA	86530329	86496994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ES.23673.1	chr4	-	2290	1	NIC	ENSMUSG00000028494.13	novel	588	3	NA	NA	7966	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTGCCTCTGTTTTA	NA	False	NA	NA	False	AATATA	-15	NA	86568915	86566625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86566600_86568900
ES.23674.1	chr4	-	5130	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	62	-3304	-12	3304	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTGTTTTTGATG	NA	False	NA	NA	False	GATAAA	-30	NA	86588235	86571497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ES.23674.10	chr4	-	1643	9	NNC	ENSMUSG00000028494.13	novel	1888	8	NA	NA	19	-141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.707472892028	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86588278	86574942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86575068_86575152_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ES.23674.13	chr4	-	6282	3	NNC	ENSMUSG00000028494.13	novel	817	2	NA	NA	2476	-142	intron_retention	TRUE	non_canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCTCCTGTGTGGT	312	False	NA	-22	True	AATAAA	-14	NA	86581486	86574943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86578659_86578716_86579267_86579469
ES.23674.2	chr4	-	1843	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	45	0	-29	0	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATGTTGTTACATGT	NA	False	NA	NA	False	AAGAAA	-42	NA	86588252	86574801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ES.23674.3	chr4	-	1614	8	NNC	ENSMUSG00000028494.13	novel	1888	8	NA	NA	-7	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	204.949769854141	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGGTCTGAGCAGG	NA	False	NA	-13	True	AATAAA	-23	NA	86588230	86574934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586726_86586886_86586943_86588181
ES.23674.4	chr4	-	1931	9	NNC	ENSMUSG00000028494.13	novel	1888	8	NA	NA	-29	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	245.287554464143	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTGGTCTGAGCAG	NA	False	NA	-14	True	AATAAA	-22	NA	86588252	86574935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86587682_86587905_86588181
ES.23674.5	chr4	-	1935	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	-181	134	-181	-134	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTGGTCTGAGCAG	NA	False	NA	-14	True	AATAAA	-22	NA	86588478	86574935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ES.23675.1	chr4	+	175	1	Intergenic	novelGene_19429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAATGTTAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86594887	86595062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_86594900_86595100
ES.23676.1	chr4	-	168	1	Intergenic	novelGene_19430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAAATAAAATC	498	False	NA	NA	False	NA	NA	NA	86632664	86632496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86632500_86632700
ES.23677.1	chr4	-	410	2	Intergenic	novelGene_19431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7653	False	NA	NA	False	NA	NA	NA	86652556	86651942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86651974_86652177
ES.23678.1	chr4	-	176	1	Intergenic	novelGene_19432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGCTTTATACC	4023	False	NA	NA	False	NA	NA	NA	86656186	86656010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86656000_86656200
ES.23679.1	chr4	+	7847	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8117	False	NA	NA	False	AATAAA	-16	NA	86666737	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.10	chr4	+	7826	33	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	14.7964047575754	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAAATCTCAA	8173	False	NA	NA	False	ATTAAA	-5	NA	86666793	86768819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713449_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.12	chr4	+	7839	33	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	14.9248115565993	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGTGTCTGTTGAAT	8173	False	NA	NA	False	AATAAA	-13	NA	86666793	86768837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755713_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.13	chr4	+	7395	33	FSM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	2	543	2	-543	multi-exon	FALSE	canonical	3	25	junction_19	11.8372756050537	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGGTTTTTTAGGTT	8173	False	NA	NA	False	AATAAA	-14	NA	86666793	86768297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.14	chr4	+	7926	33	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	15.1221265348991	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8173	False	NA	NA	False	AATAAA	-16	NA	86666793	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759328_86763063_86763215_86766194_86766260_86767006
ES.23679.15	chr4	+	7679	32	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	13.7225366637146	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAAATCTCAA	8173	False	NA	NA	False	ATTAAA	-5	NA	86666793	86768819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713449_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.16	chr4	+	8018	34	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	20.3868013984057	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8183	False	NA	NA	False	AATAAA	-16	NA	86666803	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86698584_86698752_86699778_86699949_86704270_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713449_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.17	chr4	+	7870	33	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	16	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	14.6410168704226	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAAATCTCAA	8187	False	NA	NA	False	ATTAAA	-5	NA	86666807	86768819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743187_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.18	chr4	+	8684	32	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	297	0	intron_retention	FALSE	canonical	0	0	junction_19	16.4617931816514	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8468	False	NA	NA	False	AATAAA	-16	NA	86667088	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732840_86732922_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.19	chr4	+	5572	23	NNC	ENSMUSG00000038024.18	novel	5870	31	NA	NA	8419	-7753	intron_retention	FALSE	canonical	1	3	junction_4	14.6552672955539	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGAGTTGGGCTTGGCA	NA	False	NA	NA	False	AAGAAA	-14	NA	86704498	86759539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713449_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868
ES.23679.20	chr4	+	6077	24	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	17435	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	16.2814331728681	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	2370	False	NA	NA	False	AATAAA	-16	NA	86713514	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759245_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.21	chr4	+	185	1	Intergenic	novelGene_19435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	86721723	86721908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_86721700_86721900
ES.23679.22	chr4	+	5383	20	ISM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	56507	540	27219	-540	3prime_fragment	FALSE	canonical	3	25	junction_6	12.7941295402431	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTTTAGGTTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	86723298	86768300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.23	chr4	+	6813	5	NIC	ENSMUSG00000038024.18	novel	5870	31	NA	NA	56439	-3	intron_retention	FALSE	canonical	3	53	junction_2	7.75806032459145	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGTGTCTGTTGAAT	3662	False	NA	NA	False	AATAAA	-13	NA	86752518	86768837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_86755814_86757868_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.3	chr4	+	6841	30	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-7	-7063	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	14.4445308289336	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTTTAAGTCTTC	8164	False	NA	NA	False	NA	NA	NA	86666784	86760229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667204_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221
ES.23679.4	chr4	+	7947	33	FSM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	-7	0	-7	0	multi-exon	FALSE	canonical	3	25	junction_19	11.8372756050537	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8164	False	NA	NA	False	AATAAA	-16	NA	86666784	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.5	chr4	+	7849	32	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.2015513230873	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8169	False	NA	NA	False	AATAAA	-16	NA	86666789	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667204_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.6	chr4	+	6393	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-1	147	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTTGCTTTTATTGAA	8170	False	NA	NA	False	AGTAAA	-29	NA	86666790	86767439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.7	chr4	+	7878	33	NNC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	16.7548675296912	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8170	False	NA	NA	False	AATAAA	-16	NA	86666790	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713449_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738070_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.8	chr4	+	8901	31	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	-1	0	intron_retention	FALSE	canonical	3	33	junction_19	10.1585213272186	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8170	False	NA	NA	False	AATAAA	-16	NA	86666790	86768840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86759340_86763063_86763215_86766194_86766260_86767006
ES.23679.9	chr4	+	7251	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	2	-540	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTTTAGGTTGAA	8173	False	NA	NA	False	AATAAA	-17	NA	86666793	86768300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ES.2368.1	chr10	+	1644	2	Genic_Genomic	ENSMUSG00000112490.2	novel	567	1	NA	NA	-2306	499	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGAGAGTGGACT	NA	False	NA	NA	False	NA	NA	NA	14460373	14463745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_14460552_14462279
ES.2368.2	chr10	+	1753	2	Genic_Genomic	ENSMUSG00000112490.2	novel	567	1	NA	NA	-2192	722	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATTTAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	14460487	14463968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_14460552_14462279
ES.23680.1	chr4	-	175	1	Intergenic	novelGene_19433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGCAAGGAC	9694	False	NA	NA	False	NA	NA	NA	86681778	86681603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86681600_86681800
ES.23681.1	chr4	-	1466	1	Intergenic	novelGene_19434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAACAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	86695394	86693928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_86693900_86695400
ES.23682.1	chr4	-	5021	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	45	-4188	-13	4188	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGAAAGCCTTTACAA	NA	False	NA	NA	False	AATATA	-32	NA	86775604	86768708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.10	chr4	-	1064	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	44	-230	-14	230	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACACACTGTGCCTTT	NA	False	NA	36	True	ATTAAA	-20	NA	86775605	86772666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.13	chr4	-	910	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	-33	1	-33	-1	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTCATTAATAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	86775682	86772897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.14	chr4	-	824	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9098.38236652538	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTCATTAATAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	86775604	86772897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86773193_86774103_86774243_86774382_86774594_86774964_86775097_86775557
ES.23682.19	chr4	-	2323	2	ISM	ENSMUSG00000028495.15	ENSMUST00000130001.2	639	3	-23	-1200	-1	-2	intron_retention	FALSE	canonical	3	24348	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775592	86772898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_86774594_86774964
ES.23682.2	chr4	-	3944	4	FSM	ENSMUSG00000028495.15	ENSMUST00000123229.8	639	4	-13	-3292	-13	2200	multi-exon	FALSE	canonical	3	18159	junction_1	2678.8979077225	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTATCAGCATGT	NA	False	NA	NA	False	NA	NA	NA	86775604	86770696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.22	chr4	-	798	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	8926.52702272838	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86772898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775064_86775557
ES.23682.23	chr4	-	1799	4	FSM	ENSMUSG00000028495.15	ENSMUST00000123229.8	639	4	-70	-1090	-12	-2	multi-exon	FALSE	canonical	3	18159	junction_1	2678.8979077225	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775661	86772898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.24	chr4	-	707	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	475	junction_1	9001.03592302019	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86772898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86773185_86774103_86774251_86774382_86774478_86774964_86775097_86775557
ES.23682.25	chr4	-	2676	1	NIC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-5	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	747	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTTTCATTAATAGT	NA	False	NA	NA	False	AATAAA	-19	NA	86775574	86772898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_86772900_86775600
ES.23682.27	chr4	-	2582	2	NNC	ENSMUSG00000028495.15	novel	639	3	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGCTTTCATTAATAG	NA	False	NA	NA	False	AATAAA	-18	NA	86775574	86772899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86775111_86775203
ES.23682.29	chr4	-	708	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-14	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9098.38236652538	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGCTTTCATTAATAG	NA	False	NA	NA	False	AATAAA	-18	NA	86775605	86772899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86773193_86774103_86774158_86774412_86774594_86774964_86775097_86775557
ES.23682.3	chr4	-	4178	1	Genic_Genomic	ENSMUSG00000028495.15	novel	NA	NA	NA	NA	691	2196	mono-exon	FALSE	NA	NA	NA	NA	NA	748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTATCAGC	NA	False	NA	NA	False	NA	NA	NA	86774878	86770700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_86770700_86774900
ES.23682.31	chr4	-	818	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	-14	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8948.62646932478	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTTCATTGGCTTTCA	NA	False	NA	NA	False	AATAAA	-11	NA	86775605	86772906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775091_86775557
ES.23682.4	chr4	-	4364	3	ISM	ENSMUSG00000028495.15	ENSMUST00000123229.8	639	4	-13	-3251	-13	2159	intron_retention	FALSE	canonical	3	18159	junction_1	3094.5	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86775604	86770737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_86774251_86774382_86774594_86774964
ES.23682.5	chr4	-	2644	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	45	-1811	-13	1811	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTGATTTGACTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	86775604	86771085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.6	chr4	-	1761	1	Genic_Genomic	ENSMUSG00000028495.15	novel	NA	NA	NA	NA	1473	561	mono-exon	FALSE	NA	NA	NA	NA	NA	748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTCTTGATTTTTGTT	NA	False	NA	0	True	AGTAAA	-22	NA	86774096	86772335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_86772300_86774100
ES.23682.7	chr4	-	1390	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	45	-557	-13	557	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCTGCTCTTGATTTT	NA	False	NA	-4	True	AGTAAA	-18	NA	86775604	86772339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ES.23682.8	chr4	-	1851	4	FSM	ENSMUSG00000028495.15	ENSMUST00000136174.8	1128	4	-22	-701	-13	557	multi-exon	FALSE	canonical	3	14010	junction_1	4247.77282820068	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCTGCTCTTGATTTT	NA	False	NA	-4	True	AGTAAA	-18	NA	86775604	86772339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964
ES.23683.1	chr4	+	4300	6	FSM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	-73	-11	-73	11	multi-exon	FALSE	canonical	2	4	junction_1	3.00665927567458	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTCTTTAAACATTT	NA	False	NA	37	True	AATAAA	-28	NA	86792559	86839123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86792834_86804394_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
ES.23683.2	chr4	+	4151	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11626	0	11608	0	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAAATTATTTCTTTC	7692	False	NA	26	True	AATAAA	-17	NA	86804258	86839112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
ES.23683.3	chr4	+	4106	5	NNC	ENSMUSG00000038007.15	novel	4216	6	NA	NA	11613	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.82182538049648	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTCTTTCTTTAAA	7697	False	NA	32	True	AATAAA	-23	NA	86804263	86839118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829945_86835630
ES.23683.4	chr4	+	1480	3	NNC	ENSMUSG00000038007.15	novel	4060	5	NA	NA	11623	-31708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAATTAATGTT	7707	False	NA	NA	False	NA	NA	NA	86804273	86807404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86804510_86805260_86805403_86806302
ES.23683.5	chr4	+	1219	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11641	2917	11623	-2917	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTTCCAGAACTTTTCA	7707	False	NA	NA	False	GATAAA	-24	NA	86804273	86836195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
ES.23683.6	chr4	+	3933	6	NNC	ENSMUSG00000038007.15	novel	4216	6	NA	NA	11624	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4.31740662898458	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAAATTATTTCTTT	7708	False	NA	25	True	AATAAA	-16	NA	86804274	86839111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630_86837833_86838033
ES.23683.7	chr4	+	3801	3	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	26044	-1	26026	1	3prime_fragment	FALSE	canonical	2	7	junction_1	0.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTATTTCTTTCT	7405	False	NA	27	True	AATAAA	-18	NA	86818676	86839113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_86818857_86829852_86829991_86835630
ES.23683.8	chr4	+	3799	1	Genic_Genomic	ENSMUSG00000038007.15	novel	NA	NA	NA	NA	-13608	6	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTCTTTCTTTAAA	NA	False	NA	32	True	AATAAA	-23	NA	86835319	86839118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_86835300_86839100
ES.23684.1	chr4	+	747	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	-6	2202	-6	129	multi-exon	FALSE	canonical	3	467	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4114	False	NA	22	True	NA	NA	NA	86848921	86850857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86849080_86850268
ES.23684.2	chr4	+	2896	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	46	1	46	-1	multi-exon	FALSE	canonical	3	467	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATGGGATAGAAAGTA	4166	False	NA	NA	False	NA	NA	NA	86848973	86853058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_86849080_86850268
ES.23684.3	chr4	+	1068	2	NNC	ENSMUSG00000038007.15	novel	1176	6	NA	NA	286	129	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4406	False	NA	22	True	NA	NA	NA	86849213	86850857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_86849693_86850268
ES.23685.1	chr4	+	1379	1	Intergenic	novelGene_19436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTAAACTGGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	87021814	87023193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87021800_87023200
ES.23686.1	chr4	-	196	1	Intergenic	novelGene_19437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAAAGAATTAACACCA	2498	False	NA	NA	False	NA	NA	NA	87159188	87158992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_87159000_87159200
ES.23687.1	chr4	-	173	1	Intergenic	novelGene_19438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCCAGAGGGAGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	87281200	87281027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_87281000_87281200
ES.23688.1	chr4	+	156	1	Intergenic	novelGene_19439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87324891	87325047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87324900_87325000
ES.23689.1	chr4	+	160	1	Intergenic	novelGene_19440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87451927	87452087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87451900_87452100
ES.2369.1	chr10	-	216	1	Intergenic	novelGene_1811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCATTTTCATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	14468754	14468538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14468500_14468800
ES.23690.1	chr4	-	5760	10	ISM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	1688	0	1137	0	3prime_fragment	TRUE	canonical	2	10	junction_9	3.46410161513775	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACTCCTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	87949913	87688161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760
ES.23690.10	chr4	-	176	1	Intergenic	novelGene_19441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAATTGAAATGAACTT	NA	False	NA	NA	False	NA	NA	NA	87726547	87726371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_87726400_87726500
ES.23690.2	chr4	-	5827	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	10	232	10	-232	multi-exon	FALSE	canonical	2	10	junction_9	3.7	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAGATTAGCAGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	87951591	87688393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.3	chr4	-	4733	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	-2	1338	-2	-1338	multi-exon	FALSE	canonical	2	10	junction_9	3.7	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGGGTGAATGTGAAT	NA	False	NA	NA	False	AATAAA	-2	NA	87951603	87689499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.4	chr4	-	4022	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	37	2010	37	738	multi-exon	FALSE	canonical	2	10	junction_9	3.7	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATGTTTCTGTATAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	87951564	87690171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.5	chr4	-	3338	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	10	2721	10	27	multi-exon	FALSE	canonical	2	10	junction_9	3.7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTTTGGTGTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	87951591	87690882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.6	chr4	-	2537	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	212	3320	129	-572	multi-exon	FALSE	canonical	2	10	junction_9	3.7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAAAAGTGTCCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	87951389	87691481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.7	chr4	-	2095	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	-10	3984	-10	7	multi-exon	FALSE	canonical	2	10	junction_9	3.7	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGAAACA	NA	False	NA	NA	False	AAAACA	-25	NA	87951611	87692145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.8	chr4	-	1816	12	NNC	ENSMUSG00000028496.18	novel	6069	11	NA	NA	137	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	6.05074956083409	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGAAACA	NA	False	NA	NA	False	AAAACA	-25	NA	87951381	87692145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759550_87759598_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ES.23690.9	chr4	-	4382	1	NIC	ENSMUSG00000028496.18	novel	6069	11	NA	NA	28004	7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGAAACA	NA	False	NA	NA	False	AAAACA	-25	NA	87696527	87692145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_87692100_87696500
ES.23691.1	chr4	+	144	1	Intergenic	novelGene_19442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	87960716	87960860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87960700_87960900
ES.23692.1	chr4	+	3277	1	Intergenic	novelGene_19443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCATGCTGATAAGCAA	NA	False	NA	NA	False	NA	NA	NA	87997519	88000796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87997500_88000800
ES.23692.10	chr4	+	5957	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	37.0132528755546	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012846	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88209511_88209653_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.11	chr4	+	5832	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	32.3558165443394	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAATGTGACTTTTAT	NA	False	NA	7	True	AGTAAA	-16	NA	88012847	88329240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328828
ES.23692.12	chr4	+	5874	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	37.6621220045326	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	False	NA	3	True	AGTAAA	-12	NA	88012848	88329236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88101982_88102055_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.14	chr4	+	5763	43	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	33.2150708219208	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88012850	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289077_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.15	chr4	+	7440	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_10	37.568729157268	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAATGTGACTTTTATT	NA	False	NA	8	True	AGTAAA	-17	NA	88012850	88329241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88109290_88109370_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88327234_88328853
ES.23692.16	chr4	+	5391	42	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	37.5804669098035	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAATGTGACTTTTATT	NA	False	NA	8	True	AGTAAA	-17	NA	88012851	88329241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.17	chr4	+	5845	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8599187850849	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012851	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88034167_88034202_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.19	chr4	+	5678	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-13	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	33.2109317302987	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	False	NA	3	True	AGTAAA	-12	NA	88012852	88329236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.2	chr4	+	5849	44	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-15331	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_35	32.805142785629	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTATTTTTAAGTGTG	NA	False	NA	18	True	AGTAAA	-27	NA	87997534	88329251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_87997631_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.20	chr4	+	5652	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	32.796389658058	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGACTTTTATTTTTA	NA	False	NA	12	True	AGTAAA	-21	NA	88012852	88329245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.22	chr4	+	5674	42	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	33.592317327958	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012853	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.23	chr4	+	5551	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	31.831445611301	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012853	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.25	chr4	+	5658	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	45.93763260964	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTGCAATGTGACT	NA	False	NA	2	True	AGTAAA	-11	NA	88012856	88329235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148084_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88268330_88268469_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.26	chr4	+	5871	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8599187850849	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	False	NA	3	True	AGTAAA	-12	NA	88012859	88329236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88023726_88023803_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289077_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.27	chr4	+	4131	35	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-5	-15079	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	32.5192516842532	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	88012860	88310377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195
ES.23692.28	chr4	+	5703	43	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	32.4038871859829	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAATGTGACTTTTAT	NA	False	NA	7	True	AGTAAA	-16	NA	88012862	88329240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.3	chr4	+	1589	1	Intergenic	novelGene_19444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATATCAGAATAT	NA	False	NA	NA	False	NA	NA	NA	87997537	87999126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_87997500_87999100
ES.23692.30	chr4	+	5785	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-2	8	-1	-6	multi-exon	FALSE	canonical	0	0	junction_35	26.0666035463672	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTGCAATGTGACT	NA	False	NA	2	True	AGTAAA	-11	NA	88012864	88329235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.31	chr4	+	5764	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	31.7684463050711	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012864	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039562_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.35	chr4	+	4973	23	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	4	77848	4	6923	5prime_fragment	FALSE	canonical	3	105	junction_5	14.4159003124391	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGTCTGCTCTGTGTC	NA	False	NA	NA	False	AATAAA	-27	NA	88012870	88251395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205
ES.23692.36	chr4	+	8108	3	Fusion	ENSMUSG00000038368.17_ENSMUSG00000070077.4	novel	590	2	NA	NA	4	7272	intron_retention	TRUE	non_canonical	0	0	junction_2	67.5	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88012870	88047634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_88012913_88039506_88042109_88042170
ES.23692.37	chr4	+	5921	45	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	37.8318034362581	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88012879	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88268330_88268469_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.4	chr4	+	5851	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	37.9419727171935	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88012814	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244465_88249197_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315206_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.40	chr4	+	1719	11	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	16	213788	1	14174	5prime_fragment	FALSE	canonical	3	105	junction_5	16.9292646030476	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCTGAATTCAGTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	88012882	88115455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
ES.23692.41	chr4	+	12269	41	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_35	25.2517202384313	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTGCAATGTGACT	NA	False	NA	2	True	AGTAAA	-11	NA	88012882	88329235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349
ES.23692.42	chr4	+	6523	36	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	2	-11219	combination_of_known_junctions	FALSE	canonical	0	0	junction_34	32.0515401266428	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGTTGATTTTTTAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	88012883	88314237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769
ES.23692.45	chr4	+	1746	12	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	8	14174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.6077065165739	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCTGAATTCAGTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	88012889	88115455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88034167_88034202_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995
ES.23692.46	chr4	+	5846	44	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-7651	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8968757609235	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAATGTGACTTTTAT	NA	False	NA	7	True	AGTAAA	-16	NA	88031884	88329240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88031989_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.48	chr4	+	5748	43	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	26638	-1	-31	1	3prime_fragment	FALSE	canonical	0	0	junction_34	26.3736129553283	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGACTTTTATTTTT	NA	False	NA	11	True	AGTAAA	-20	NA	88039504	88329244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.49	chr4	+	5718	43	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	32.1337553250864	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88039504	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88039562_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.5	chr4	+	5931	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	-47	-93	-46	88	multi-exon	FALSE	canonical	0	0	junction_35	26.0666035463672	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTGTCATTGAGTTT	NA	False	NA	103	True	AATGAA	-45	NA	88012819	88329336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.51	chr4	+	5494	42	FSM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	-31	-7	-31	0	multi-exon	FALSE	canonical	0	0	junction_33	32.2118766455104	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88039504	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.53	chr4	+	5271	38	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	45467	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	34.630597819448	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCAATGTGACTTTTAT	NA	False	NA	7	True	AGTAAA	-16	NA	88088139	88329240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.54	chr4	+	6669	30	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-57804	-5	intron_retention	FALSE	non_canonical	0	0	junction_14	44.2928584844436	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	False	NA	3	True	AGTAAA	-12	NA	88148067	88329236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260461_88260634_88265891_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88327234_88328853
ES.23692.55	chr4	+	4196	32	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-57791	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.3688758516249	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGTGCAATGTGAC	NA	False	NA	1	True	AGTAAA	-10	NA	88148080	88329234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215402_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.57	chr4	+	4071	27	NNC	ENSMUSG00000038368.17	novel	5456	42	NA	NA	-8898	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	40.1239204724917	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88196973	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260461_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.58	chr4	+	3955	28	NNC	ENSMUSG00000038368.17	novel	5988	17	NA	NA	-8885	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.6848697728604	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88196986	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88197330_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.59	chr4	+	4064	27	ISM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	157466	-4	-8870	-1	3prime_fragment	FALSE	canonical	0	0	junction_18	30.5943346652524	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGACTTTTATTTTTA	NA	False	NA	12	True	AGTAAA	-21	NA	88197001	88329245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.6	chr4	+	5796	44	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	41.5997176218731	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	False	NA	3	True	AGTAAA	-12	NA	88012840	88329236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88012913_88039506_88039596_88042824_88042900_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88209511_88209653_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.60	chr4	+	1105	1	Genic_Genomic	ENSMUSG00000038368.17	novel	NA	NA	NA	NA	-624	-15515	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCGTGAATACCTCAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	88205247	88206352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_88205200_88206400
ES.23692.61	chr4	+	3900	27	NNC	ENSMUSG00000038368.17	novel	5988	17	NA	NA	-436	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	39.680398481727	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTTATTTTTAAGT	NA	False	NA	15	True	AGTAAA	-24	NA	88205435	88329248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88205808_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.62	chr4	+	3916	17	ISM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	225992	0	1924	0	3prime_fragment	FALSE	canonical	0	0	junction_8	38.3429731991404	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAATGTGACTTTTATT	NA	False	NA	8	True	AGTAAA	-17	NA	88265527	88329241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.63	chr4	+	2757	1	Intergenic	novelGene_19448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAGAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	88279186	88281943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_88279200_88281900
ES.23692.64	chr4	+	1845	12	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	15606	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.8130696903705	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88279209	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88279274_88286909_88287013_88288991_88289077_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.65	chr4	+	3357	9	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-24181	0	intron_retention	FALSE	canonical	0	0	junction_1	51.4318420338996	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88294405	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88294614_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88327234_88328853
ES.23692.66	chr4	+	1790	10	NNC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-23958	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	38.3289852606498	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88294628	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_88294826_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23692.67	chr4	+	5073	1	NIC	ENSMUSG00000038368.17	novel	5791	44	NA	NA	-2714	-4511	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGACTGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	88315872	88320945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_88315900_88320900
ES.23692.68	chr4	+	3609	5	ISM	ENSMUSG00000038368.17	ENSMUST00000107148.8	5988	17	53038	0	-1945	0	3prime_fragment	FALSE	canonical	3	147	junction_2	10.280442597476	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	False	NA	13	True	AGTAAA	-22	NA	88316641	88329246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ES.23693.1	chr4	-	5365	1	Intergenic	novelGene_19445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAGATTGGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	88065403	88060038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_88060000_88065400
ES.23693.2	chr4	-	182	1	Intergenic	novelGene_19446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	88062830	88062648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_88062600_88062800
ES.23693.3	chr4	-	2119	1	Intergenic	novelGene_19447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGATCATATGATCTCTT	NA	False	NA	NA	False	NA	NA	NA	88065403	88063284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_88063300_88065400
ES.23694.1	chr4	-	2739	2	Antisense	novelGene_ENSMUSG00000038368.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAATCTGATGAAATAATGA	NA	False	NA	NA	False	NA	NA	NA	88221731	88212649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_88215335_88221677
ES.23695.1	chr4	-	4728	6	NIC	ENSMUSG00000028497.13	novel	4680	7	NA	NA	60	225	combination_of_known_splicesites	TRUE	canonical	1	1	junction_5	2.48193472919817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGGAACCCAGGTCA	NA	False	NA	NA	False	AATAAA	-13	NA	88357092	88328352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88357069
ES.23695.2	chr4	-	4794	7	FSM	ENSMUSG00000028497.13	ENSMUST00000151280.8	4680	7	22	-136	9	136	multi-exon	FALSE	canonical	2	3	junction_1	2.26691175145591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCGTTTGGTAACTACT	NA	False	NA	NA	False	NA	NA	NA	88357143	88328441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ES.23695.3	chr4	-	4557	6	NIC	ENSMUSG00000028497.13	novel	4680	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	2.48193472919817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGCTGAGCTTTTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	88357146	88328577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88357069
ES.23695.4	chr4	-	4667	7	FSM	ENSMUSG00000028497.13	ENSMUST00000151280.8	4680	7	10	3	-3	-3	multi-exon	FALSE	canonical	2	3	junction_1	2.26691175145591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGAAGGCTGAGCTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	88357155	88328580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ES.23695.5	chr4	-	2303	1	ISM	ENSMUSG00000028497.13	ENSMUST00000151280.8	4680	7	24582	1703	24569	886	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTAGTGCTGCTGTAA	NA	False	NA	NA	False	NA	NA	NA	88332583	88330280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_88330300_88332600
ES.23695.6	chr4	-	1039	7	FSM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	20	1030	9	-1030	multi-exon	FALSE	canonical	2	3	junction_1	2.26691175145591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCAATTGATTAACTT	NA	False	NA	NA	False	AGTAAA	-14	NA	88357143	88332196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ES.23696.1	chr4	-	884	1	FSM	ENSMUSG00000078480.4	ENSMUST00000121413.2	636	1	-61	-187	-61	187	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTGTAAAAAAAAAAAAAAA	4740	False	NA	NA	False	AATAAA	-15	NA	88518108	88517224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88517200_88518100
ES.23697.1	chr4	+	1947	1	Antisense	novelGene_ENSMUSG00000070923.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTAAGTTACCTTTTTG	NA	False	NA	NA	False	ACTAAA	-30	NA	88636331	88638278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_88636300_88638300
ES.23698.1	chr4	-	4232	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	-58	0	-58	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGTATTGCTTTTTT	NA	False	NA	-1	True	NA	NA	NA	88640760	88636528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88636500_88640800
ES.23698.2	chr4	-	2976	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	-1	1199	-1	-1199	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTTCAATGAGAATT	NA	False	NA	NA	False	NA	NA	NA	88640703	88637727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88637700_88640700
ES.23698.3	chr4	-	2665	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	-20	1529	-20	-1529	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGGTCCCCTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	88640722	88638057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88638100_88640700
ES.23698.4	chr4	-	2547	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	-10	1637	-10	-1637	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATTTTTTTTTGTGGTG	NA	False	NA	NA	False	ATTAAA	-43	NA	88640712	88638165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_88638200_88640700
ES.23699.1	chr4	+	173	1	Intergenic	novelGene_19449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAGGAAGGC	NA	False	NA	NA	False	NA	NA	NA	88731297	88731470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_88731300_88731500
ES.237.1	chr1	-	178	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	34398704	34398526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34398500_34398700
ES.2370.1	chr10	-	139	1	Intergenic	novelGene_1812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAATAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	14480355	14480216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14480200_14480400
ES.23700.1	chr4	-	1010	1	NIC	ENSMUSG00000117123.2	novel	1087	3	NA	NA	77	-27580	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAGGCTTAA	NA	False	NA	NA	False	NA	NA	NA	88856681	88855671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_88855700_88856700
ES.23701.1	chr4	-	177	1	Intergenic	novelGene_19450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	88885628	88885451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_88885500_88885600
ES.23702.1	chr4	-	177	1	Intergenic	novelGene_19451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATCAACA	NA	False	NA	NA	False	NA	NA	NA	89017485	89017308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89017300_89017500
ES.23703.1	chr4	+	2884	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	-3	-84	-3	84	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAACCATTTCTCTGG	5045	False	NA	NA	False	ACTAAA	-19	NA	89055355	89099402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23703.10	chr4	+	1632	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	274	728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	197.893085956503	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAAAGGAAA	5322	False	NA	NA	False	NA	NA	NA	89055632	89098439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097716
ES.23703.11	chr4	+	3405	7	NIC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	307	1	intron_retention	FALSE	canonical	3	513	junction_1	29.9763795901595	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAGATTATACTTGAG	5355	False	NA	NA	False	NA	NA	NA	89055665	89099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89090622_89095039_89095163_89097704
ES.23703.12	chr4	+	1568	8	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	343	728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	201.206666015268	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAAAGGAAA	5391	False	NA	NA	False	NA	NA	NA	89055701	89098439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089461_89090381_89090622_89095039_89095163_89097704
ES.23703.13	chr4	+	2249	5	ISM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	19322	1	19322	-1	3prime_fragment	FALSE	canonical	3	543	junction_2	23.878599205146	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATCAGATTATACTTG	NA	False	NA	NA	False	NA	NA	NA	89074680	89099317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23703.14	chr4	+	5238	2	FSM	ENSMUSG00000062937.8	ENSMUST00000204571.2	559	2	-4054	-625	-4054	625	multi-exon	FALSE	canonical	3	597	junction_1	0	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTTGAAACTCCTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	89090556	89098336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89095163_89097704
ES.23703.15	chr4	+	5291	2	FSM	ENSMUSG00000062937.8	ENSMUST00000204571.2	559	2	-4004	-728	-4004	728	multi-exon	FALSE	canonical	3	597	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAATAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	89090606	89098439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89095163_89097704
ES.23703.16	chr4	+	7277	2	FSM	ENSMUSG00000062937.8	ENSMUST00000204571.2	559	2	-2013	-4705	-2013	3098	multi-exon	FALSE	canonical	3	597	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTAGAAAAAAATGACTTA	NA	False	NA	NA	False	NA	NA	NA	89092597	89102416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89095163_89097704
ES.23703.2	chr4	+	1723	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	236	838	236	769	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTTTGCTAAGAAAGAT	5284	False	NA	NA	False	AATAAA	-35	NA	89055594	89098480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23703.4	chr4	+	949	4	NNC	ENSMUSG00000062937.8	novel	2797	8	NA	NA	258	605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	275.945646821978	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAAATGGACTTAG	5306	False	NA	NA	False	AATAAA	-6	NA	89055616	89098316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_89055762_89090552_89090622_89095039_89095163_89097704
ES.23703.5	chr4	+	2037	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	260	500	260	-500	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAGTGCAATTGTTACT	5308	False	NA	30	True	AATAAA	-40	NA	89055618	89098818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23703.8	chr4	+	1547	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	262	988	262	619	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGAGAACTTTGAAACT	5310	False	NA	NA	False	AATAAA	-20	NA	89055620	89098330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23703.9	chr4	+	5692	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	263	-3158	263	3158	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGCCTGATTTGAGTTT	5311	False	NA	NA	False	AATAAA	-21	NA	89055621	89102476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ES.23704.1	chr4	-	161	1	Intergenic	novelGene_19452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	89062319	89062158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89062200_89062300
ES.23705.1	chr4	-	3570	1	FSM	ENSMUSG00000083989.3	ENSMUST00000120724.3	493	1	-3025	-52	-3025	52	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAAACCAACACCCCC	NA	False	NA	NA	False	AATAAA	-36	NA	89083453	89079883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_89079900_89083500
ES.23705.2	chr4	-	4979	1	Intergenic	novelGene_19453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACCAACCAACCAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	89086889	89081910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89081900_89086900
ES.23706.1	chr4	-	1498	1	FSM	ENSMUSG00000088504.4	ENSMUST00000157879.4	140	1	-635	-723	-635	723	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCCTCCTAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	89101992	89100494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_89100500_89102000
ES.23707.1	chr4	-	152	1	Intergenic	novelGene_19454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATCTTAAAA	739	False	NA	NA	False	NA	NA	NA	89127488	89127336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89127300_89127500
ES.23708.1	chr4	-	112	1	ISM	ENSMUSG00000044303.7	ENSMUST00000060501.5	852	3	7608	2	7608	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATTTTTAGCATAGAA	NA	False	NA	-5	True	AATAAA	-24	NA	89192821	89192709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_89192700_89192800
ES.23709.1	chr4	-	517	1	NIC	ENSMUSG00000044303.7	novel	895	3	NA	NA	64	-19532	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAGAGTTTTTCTAAAC	NA	False	NA	NA	False	NA	NA	NA	89212826	89212309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_89212300_89212800
ES.2371.1	chr10	+	592	4	Antisense	novelGene_ENSMUSG00000019868.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTTCATCCCTGTTT	688	False	NA	NA	False	AATAAA	-29	NA	14523752	14535619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_14523956_14528662_14528729_14532326_14532395_14535364
ES.2371.2	chr10	+	1941	9	NNC	ENSMUSG00000085572.2	novel	815	6	NA	NA	-16168	13353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.86698058348295	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGCTGTTTCTTCA	731	False	NA	NA	False	TATAAA	-16	NA	14523795	14557415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_14523956_14528662_14528729_14532326_14532395_14541353_14541476_14542122_14542181_14542265_14542370_14542878_14542954_14552227_14552350_14556249
ES.2371.3	chr10	+	1196	9	NNC	ENSMUSG00000085572.2	novel	815	6	NA	NA	-16138	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.17635004720366	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTAATTCATATATCT	761	False	NA	NA	False	AATAAA	-16	NA	14523825	14544224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_14523956_14528662_14528729_14532326_14532395_14535364_14535413_14541353_14541476_14542122_14542181_14542265_14542370_14542878_14542954_14543699
ES.23710.1	chr4	+	3617	5	NNC	ENSMUSG00000085147.2	novel	610	4	NA	NA	-57099	-13103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.73205080756888	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGCTTGGTTAAGTT	NA	False	NA	NA	False	AAAAAG	-9	NA	89213094	89275014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_89213435_89214789_89214842_89268569_89268626_89271433_89271839_89272250
ES.23710.2	chr4	+	1062	1	Intergenic	novelGene_19455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGCCAAATGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	89246561	89247623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_89246600_89247600
ES.23711.1	chr4	-	1865	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	61	-536	61	536	multi-exon	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTAGACTCCAAGATGT	NA	False	NA	NA	False	AATAAA	-12	NA	89229215	89223999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_89225552_89228902
ES.23711.2	chr4	-	1356	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	10	24	10	-24	multi-exon	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	89229266	89224559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_89225552_89228902
ES.23712.1	chr4	-	2993	1	Intergenic	novelGene_19456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	89386036	89383043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89383000_89386000
ES.23713.1	chr4	+	1866	1	ISM	ENSMUSG00000043753.3	ENSMUST00000052478.3	4079	2	4705	4	4705	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGAGTCATTGCGTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	89581139	89583005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_89581100_89583000
ES.23714.1	chr4	+	4394	1	Intergenic	novelGene_19457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTGCCACAAGAACAGAA	NA	False	NA	NA	False	NA	NA	NA	89599859	89604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_89599900_89604300
ES.23715.1	chr4	-	178	1	Intergenic	novelGene_19458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAAATGAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	89624027	89623849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_89623800_89624000
ES.23716.1	chr4	+	1949	2	FSM	ENSMUSG00000070902.6	ENSMUST00000107129.2	2276	2	1	326	1	96	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAACCCAAAT	NA	False	NA	NA	False	NA	NA	NA	90107057	90113613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_90107213_90111819
ES.23717.1	chr4	-	4439	1	Intergenic	novelGene_19459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTACATGTGTAC	NA	False	NA	NA	False	TTTAAA	-5	NA	91104181	91099742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_91099700_91104200
ES.23717.2	chr4	-	4713	2	Intergenic	novelGene_19460	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAATAGTAGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	91120733	91099771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_91100359_91116607
ES.23718.1	chr4	+	2150	1	Intergenic	novelGene_19462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGATCTCACTGTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	91264850	91267000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_91264800_91267000
ES.23719.1	chr4	-	3784	6	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-5	785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.2248798754728	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATGTTGAAGGGATTT	NA	False	NA	NA	False	ATTAAA	-12	NA	91260276	91138214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91138322_91138772_91141808_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.10	chr4	-	3285	5	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.48746859276655	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260179	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141808_91142377_91142417_91152228_91152383_91196847_91197092_91260136
ES.23719.11	chr4	-	3714	6	NIC	ENSMUSG00000008489.19	novel	3797	7	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.2082863444267	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260320	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.12	chr4	-	3697	7	FSM	ENSMUSG00000008489.19	ENSMUST00000107118.8	3797	7	97	3	-16	-3	multi-exon	FALSE	canonical	0	0	junction_6	42.6718746821474	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260209	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91199809_91199901_91260136
ES.23719.13	chr4	-	3683	7	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	496	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	41.6643332679963	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91259697	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141808_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259586
ES.23719.14	chr4	-	3669	6	NNC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	481	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	40.8196031337886	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91259712	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
ES.23719.15	chr4	-	3614	6	NNC	ENSMUSG00000008489.19	novel	1552	6	NA	NA	-30	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	36.2082863444267	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260223	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197085_91260132
ES.23719.16	chr4	-	3321	4	NNC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	489	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91259704	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141808_91152228_91152383_91196847_91197092_91259586
ES.23719.17	chr4	-	3903	6	NIC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	54	-3	combination_of_known_junctions	FALSE	canonical	2	27	junction_5	26.6563313304738	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260139	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259766
ES.23719.18	chr4	-	3870	7	NIC	ENSMUSG00000008489.19	novel	3840	8	NA	NA	-69	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	43.732774386672	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91288290	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91287674_91287774_91288052
ES.23719.19	chr4	-	3551	6	NNC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	136	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	41.6461282714252	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	False	NA	-1	True	AATAAA	-17	NA	91260057	91139002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197029_91259976
ES.23719.2	chr4	-	3945	7	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-5	723	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.732774386672	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTCTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	91260276	91138276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91138322_91138772_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197089_91260136
ES.23719.23	chr4	-	3476	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	42.0694663621967	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGTGTATCTTTAAAT	NA	False	NA	-2	True	AATAAA	-16	NA	91260270	91139003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91142377_91142417_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.24	chr4	-	3737	7	NIC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.2947473830854	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91260307	91139005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.25	chr4	-	3695	7	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	39.660013447636	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91259705	91139005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259576
ES.23719.27	chr4	-	4102	7	NIC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	42.0571700849636	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91264705	91139005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141808_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91264172
ES.23719.30	chr4	-	3467	7	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.1776580322113	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91260201	91139005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141805_91142377_91142417_91148997_91149060_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.32	chr4	-	3466	5	NNC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.5521678957215	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTGTATCTTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	91260277	91139005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141829_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.35	chr4	-	4163	7	NIC	ENSMUSG00000008489.19	novel	4191	8	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	39.9902765959705	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACTGTGTATCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	91264718	91139006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91199809_91199901_91264172
ES.23719.36	chr4	-	3494	5	NIC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	154	-83	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	39.4104998699585	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGGCTGTACATGTTTT	NA	False	NA	-87	True	AATATA	-15	NA	91260039	91139088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141808_91152228_91152383_91169450_91169555_91196847_91197092_91259766
ES.23719.37	chr4	-	3769	7	NIC	ENSMUSG00000008489.19	novel	1591	7	NA	NA	137	-84	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	40.2947473830854	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGGCTGTACATGTTT	NA	False	NA	-88	True	AATATA	-14	NA	91260056	91139089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197089_91259766
ES.23719.38	chr4	-	2921	1	NIC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	-7	-900	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATAACCATAGGTTTT	NA	False	NA	NA	False	TATAAA	-31	NA	91142826	91139905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91139900_91142800
ES.23719.39	chr4	-	2738	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	27	906	27	-900	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATAACCATAGGTTTT	NA	False	NA	NA	False	TATAAA	-31	NA	91260244	91139905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.4	chr4	-	3807	7	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-5	95	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	40.2947473830854	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGTGTTCTCAGAGG	NA	False	NA	97	True	AATAAA	-33	NA	91260276	91138904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.40	chr4	-	2785	7	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	-900	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	39.8692306867784	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATAACCATAGGTTTT	NA	False	NA	NA	False	TATAAA	-31	NA	91259705	91139905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259586
ES.23719.41	chr4	-	2558	6	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-3	-920	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	42.0694663621967	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	TATAAA	-11	NA	91260274	91139925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141805_91142377_91142417_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.42	chr4	-	2387	5	ISM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-5	8479	-5	-576	5prime_fragment	FALSE	canonical	0	0	junction_4	40.2088298760359	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGAGGAAAACAAAATGT	NA	False	NA	NA	False	NA	NA	NA	91260276	91147478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.43	chr4	-	1382	1	Intergenic	novelGene_19461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAAAAATATATATA	NA	False	NA	NA	False	NA	NA	NA	91219751	91218369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_91218400_91219800
ES.23719.44	chr4	-	2198	3	NNC	ENSMUSG00000008489.19	novel	415	2	NA	NA	-39	-7562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTCAGAGCTGCAGGT	NA	False	NA	NA	False	AATAAA	-15	NA	91288260	91276230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91278122_91287674_91287774_91288052
ES.23719.5	chr4	-	3538	5	NIC	ENSMUSG00000008489.19	novel	3730	7	NA	NA	-3	90	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.0638435999416	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAAGAGGTGTTCTC	NA	False	NA	92	True	AATAAA	-28	NA	91260274	91138909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_91141808_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.23719.6	chr4	-	3731	6	NNC	ENSMUSG00000008489.19	novel	4127	7	NA	NA	488	79	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	35.4761891978268	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTCTCTTTAATGAAAA	NA	False	NA	81	True	AATAAA	-17	NA	91259705	91138920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91259586
ES.23719.7	chr4	-	4139	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107111.9	1552	6	-33	-2554	-4	77	multi-exon	FALSE	canonical	0	0	junction_5	36.2082863444267	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTACTCTCTTTAATGAA	NA	False	NA	79	True	AATAAA	-15	NA	91264704	91138922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91141805_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197089_91264172
ES.23719.8	chr4	-	3784	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	-59	-54	-24	54	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	56	True	AATACA	-36	NA	91260330	91138945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ES.2372.1	chr10	-	1883	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	84	7	-11	-7	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCATCTGGAAATC	NA	False	NA	NA	False	AATAAA	-15	NA	14581220	14530505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.10	chr10	-	3327	8	NNC	ENSMUSG00000019868.17	novel	475	4	NA	NA	-11	-1778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.367775440801	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTTCTCTTATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	14581220	14533360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14535889_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.11	chr10	-	2965	8	NNC	ENSMUSG00000019868.17	novel	475	4	NA	NA	3	-1832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.367775440801	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGGTAGATAAGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	14581241	14533414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14535560_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.12	chr10	-	1627	6	NNC	ENSMUSG00000019868.17	novel	475	4	NA	NA	-11	10401	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	260.233279962421	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTCGTCCATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	14581220	14550223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14551316_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.2	chr10	-	1369	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	35	570	-25	30	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGACTTTTTCTTCC	NA	False	NA	-2	True	AATAAA	-25	NA	14581269	14531068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.3	chr10	-	6845	2	ISM	ENSMUSG00000019868.17	ENSMUST00000149485.2	753	7	31199	-458	-5999	25	3prime_fragment	FALSE	canonical	3	56	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGATCCTGACTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	14550004	14531073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_14531590_14543675
ES.2372.4	chr10	-	1225	7	FSM	ENSMUSG00000019868.17	ENSMUST00000149485.2	753	7	-17	-455	-11	22	multi-exon	FALSE	canonical	3	56	junction_1	226.315168637799	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTTGGAGATCCTGACTT	NA	False	NA	-10	True	AATAAA	-17	NA	14581220	14531076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.2372.5	chr10	-	4470	1	NIC	ENSMUSG00000019868.17	novel	1974	8	NA	NA	8457	20	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGTTGGAGATCCTGAC	9906	False	NA	-12	True	AATAAA	-15	NA	14535548	14531078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14531100_14535500
ES.2372.6	chr10	-	3924	7	NIC	ENSMUSG00000019868.17	novel	1974	8	NA	NA	15	20	intron_retention	FALSE	canonical	3	639	junction_5	57.4303926505818	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGGTTGGAGATCCTGAC	NA	False	NA	-12	True	AATAAA	-15	NA	14581229	14531078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14563453_14581093
ES.2372.8	chr10	-	3349	1	Intergenic	novelGene_1813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTTAAAACTACCCTGT	9859	False	NA	NA	False	NA	NA	NA	14535801	14532452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14532500_14535800
ES.2372.9	chr10	-	3883	8	NNC	ENSMUSG00000019868.17	novel	475	4	NA	NA	-8	-1254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.367775440801	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTCTGATGGCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	14581252	14532836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_14535889_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ES.23720.1	chr4	-	411	1	FSM	ENSMUSG00000100863.2	ENSMUST00000122162.2	1009	1	826	-228	826	228	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGTAGACACAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	91693966	91693555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91693600_91694000
ES.23721.1	chr4	-	1276	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-72	-202	-72	202	mono-exon	FALSE	NA	NA	NA	NA	NA	746	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGAATAATCTAATA	NA	False	NA	NA	False	AATAAA	-36	NA	91740978	91739702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_91739700_91741000
ES.23722.1	chr4	+	210	1	Intergenic	novelGene_19463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATTTGGATTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	92489097	92489307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_92489100_92489300
ES.23723.1	chr4	-	177	1	Intergenic	novelGene_19464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGCACGTGT	NA	False	NA	NA	False	NA	NA	NA	92909538	92909361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_92909400_92909500
ES.23724.1	chr4	-	1693	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	-324	5	-324	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTCCATGACTGTTA	NA	False	NA	0	True	AATAAA	-17	NA	93224072	93222379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_93222400_93224100
ES.23725.1	chr4	-	160	1	Intergenic	novelGene_19465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	93998440	93998280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_93998300_93998400
ES.23726.1	chr4	+	2452	1	Antisense	novelGene_ENSMUSG00000087128.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94348973	94351425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_94349000_94351400
ES.23727.1	chr4	+	3659	1	Intergenic	novelGene_19466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCACAGGCTTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	94416956	94420615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94417000_94420600
ES.23727.2	chr4	+	4617	1	Intergenic	novelGene_19467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTGGTGAGCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	94416957	94421574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94417000_94421600
ES.23727.3	chr4	+	174	1	Intergenic	novelGene_19468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	94421160	94421334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94421200_94421300
ES.23728.1	chr4	+	1513	1	Intergenic	novelGene_19469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAACTAACAACAA	NA	False	NA	NA	False	NA	NA	NA	94441787	94443300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94441800_94443300
ES.23729.1	chr4	-	1737	6	NNC	ENSMUSG00000087128.8	novel	523	5	NA	NA	1	652	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	5.51361950083609	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGTGCAAGCGTTTT	NA	False	NA	NA	False	NA	NA	NA	94365416	94348515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94349585_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
ES.23729.10	chr4	-	2899	2	ISM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	34172	0	34142	0	3prime_fragment	FALSE	canonical	3	262	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94410861	94388317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_94389654_94409298
ES.23729.12	chr4	-	2020	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	114.767972448763	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445024	94388319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94389654_94409298_94409373_94438658_94438744_94439501_94439703_94444698
ES.23729.13	chr4	-	1783	4	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	119.04714285619	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445006	94388319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444832
ES.23729.14	chr4	-	2011	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	109.846483785327	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445024	94388319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94389654_94409298_94409373_94437355_94437432_94439501_94439703_94444698
ES.23729.15	chr4	-	1946	6	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	95.7091427189691	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445008	94388319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444832
ES.23729.16	chr4	-	2478	5	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.980976949723	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGATATCTTTTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	94445008	94388319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389654_94409298_94409373_94438658_94438744_94439027_94439703_94444698
ES.23729.17	chr4	-	2208	7	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	117.758816607882	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTACAGATATCTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	94445026	94388321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94440719_94440832_94444698
ES.23729.18	chr4	-	1574	2	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	55008	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATTACAGATATCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	94389995	94388322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389669_94389767
ES.23729.19	chr4	-	1988	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	0	119	0	-119	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGACTTGATACTTTT	NA	False	NA	0	True	AATAAA	-17	NA	94445033	94388436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ES.23729.2	chr4	-	1743	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	1	650	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	4.63033476111609	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATGTGCAAGCGTT	NA	False	NA	NA	False	NA	NA	NA	94365416	94348517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
ES.23729.20	chr4	-	2809	1	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	53757	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAAGACTTGATACTTT	NA	False	NA	-1	True	AATAAA	-16	NA	94391246	94388437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94388400_94391200
ES.23729.21	chr4	-	1872	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	7	228	7	-228	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATCTGGAAAGGGACA	NA	False	NA	NA	False	AATAAA	-32	NA	94445026	94388545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ES.23729.22	chr4	-	1671	7	NNC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	-6	-229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.97631828442	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTATCTGGAAAGGGAC	NA	False	NA	NA	False	AATAAA	-31	NA	94445039	94388546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439490_94439543_94439632_94439703_94444832
ES.23729.23	chr4	-	1688	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	29	390	-1	-390	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAGAAAAAAAAATCAA	NA	False	NA	-18	True	NA	NA	NA	94445004	94388707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ES.23729.24	chr4	-	650	2	FSM	ENSMUSG00000028578.9	ENSMUST00000153294.2	2075	2	23	1402	23	-1402	multi-exon	FALSE	canonical	3	294	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTTTTTTTTAAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	94444980	94439334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94439703_94444698
ES.23729.3	chr4	-	3919	9	Fusion	ENSMUSG00000087128.8_ENSMUSG00000028578.9	novel	925	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_4	124.358353157317	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTATGTTCTGGGCTGG	NA	False	NA	NA	False	CATAAA	-16	NA	94445013	94349168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94356103_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ES.23729.4	chr4	-	991	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.01331855134916	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTATGTTCTGGGCTG	NA	False	NA	NA	False	CATAAA	-15	NA	94365417	94349169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94349585_94350122_94350199_94352666_94352793_94353653_94353778_94356020_94356103_94365249
ES.23729.5	chr4	-	1121	6	NNC	ENSMUSG00000087128.8	novel	925	5	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	4.63033476111609	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATTTATGTTCTGGG	NA	False	NA	NA	False	CATAAA	-12	NA	94365449	94349172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94349593_94350122_94350292_94352666_94352793_94353653_94353778_94356020_94356103_94365249
ES.23729.6	chr4	-	4326	1	Genic_Genomic	ENSMUSG00000028578.9	novel	NA	NA	NA	NA	53290	930	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAGAGCTTCGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	94391713	94387387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_94387400_94391700
ES.23729.7	chr4	-	2111	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	3	-7	3	7	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTGCTTCATTACTA	NA	False	NA	NA	False	AATAAA	-29	NA	94445030	94388310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ES.23729.8	chr4	-	1952	4	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	128.416855937563	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTTGCTTCATTACT	NA	False	NA	NA	False	AATAAA	-28	NA	94445033	94388311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444698
ES.23729.9	chr4	-	3874	1	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	52812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94392191	94388317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94388300_94392200
ES.2373.1	chr10	-	714	1	FSM	ENSMUSG00000093798.3	ENSMUST00000177767.3	1941	1	1309	-82	1309	82	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAAAACAATGTGG	NA	False	NA	NA	False	TTTAAA	-6	NA	14621737	14621023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_14621000_14621700
ES.23730.1	chr4	+	156	1	Intergenic	novelGene_19470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	94487271	94487427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94487300_94487400
ES.23731.1	chr4	+	4598	20	NNC	ENSMUSG00000028576.13	novel	549	4	NA	NA	-11295	2	intron_retention	FALSE	canonical	0	0	junction_2	57.9090891301022	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94491432	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94492167_94502197_94502319_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.10	chr4	+	1989	18	NIC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	30	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	45.9501761163231	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502757	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.11	chr4	+	2106	20	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.6722753882724	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502758	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549230_94550831_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.12	chr4	+	3764	21	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	67.8927647102399	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502768	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94538143_94538261_94541163_94541853_94542068_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.13	chr4	+	6005	20	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	46	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.4753970395797	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502773	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94518483_94519936_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.14	chr4	+	2020	19	NIC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	61	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	45.2511509982527	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502788	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.16	chr4	+	3035	18	ISM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	3591	-2	3591	2	intron_retention	FALSE	canonical	3	154	junction_7	17.0346684967993	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94506318	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956
ES.23731.17	chr4	+	148	1	Intergenic	novelGene_19473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACATTAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94578260	94578408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94578300_94578400
ES.23731.2	chr4	+	2832	21	NNC	ENSMUSG00000028576.13	novel	549	4	NA	NA	-11292	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.4463240610051	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94491435	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94492167_94502197_94502319_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.3	chr4	+	2633	20	NNC	ENSMUSG00000028576.13	novel	549	4	NA	NA	-11214	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.3082606551911	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94491513	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94492167_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.4	chr4	+	2185	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	-39	-7	-39	7	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCTGTGTTTGTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	94502688	94581473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ES.23731.5	chr4	+	3835	19	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	2	-2953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	45.1727821471468	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTTTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	94502729	94578513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94576475
ES.23731.7	chr4	+	2196	21	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	11	250	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	41.7957832801348	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAACTTGCTAAC	NA	False	NA	NA	False	AATAAA	-25	NA	94502738	94581716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187_94581351_94581532
ES.23731.8	chr4	+	2162	21	NNC	ENSMUSG00000028576.13	novel	2139	20	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	56.9027899140279	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTTTTCCTGTGTTTG	NA	False	NA	12	True	AATAAA	-13	NA	94502754	94581468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94575904_94575953_94579956_94580018_94581187
ES.23731.9	chr4	+	3190	8	ISM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	27	26409	27	-26409	5prime_fragment	FALSE	canonical	3	184	junction_4	8.69200899724358	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGCATGCAACTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	94502754	94526526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010
ES.23732.1	chr4	-	6756	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-11	2380	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_13	198.074757269713	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTGAGATAATGTATTA	NA	False	NA	NA	False	AATAAA	-17	NA	94491429	94453370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478303_94491113
ES.23732.10	chr4	-	4837	15	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	1	365	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	253.899787398131	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACATCTTATTGACT	NA	False	NA	-8	True	AATAAA	-18	NA	94491480	94455385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470069_94470106_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.11	chr4	-	4770	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	26	365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	200.246563991826	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACATCTTATTGACT	NA	False	NA	-8	True	AATAAA	-18	NA	94491455	94455385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472234_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.12	chr4	-	6981	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	3	364	intron_retention	FALSE	canonical	3	626	junction_11	55.1790016421303	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACACATCTTATTGAC	NA	False	NA	-9	True	AATAAA	-17	NA	94491369	94455386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.15	chr4	-	4625	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	79	-1920	16	267	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGGTTTACATATTT	NA	False	NA	-106	True	AAAACA	-21	NA	94491402	94455483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.16	chr4	-	4696	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-196	-1716	-196	63	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTACAATTTATGTT	NA	False	NA	53	True	AATACA	-18	NA	94491677	94455687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.17	chr4	-	4359	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	22	25	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	194.724049930412	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGGCTTGTTAATAC	NA	False	NA	15	True	ATTAAA	-30	NA	94491459	94455725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478231_94491113
ES.23732.18	chr4	-	4291	12	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	18	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	210.630144687886	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTGCCATTATAACAC	NA	False	NA	0	True	ATTAAA	-15	NA	94491463	94455740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.19	chr4	-	6715	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	24	10	intron_retention	FALSE	canonical	3	626	junction_11	55.1790016421303	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTGCCATTATAACAC	NA	False	NA	0	True	ATTAAA	-15	NA	94491457	94455740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.2	chr4	-	5819	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-3	-3032	-3	1379	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGTGGTTAAGTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	94491484	94454371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.20	chr4	-	4493	4	FSM	ENSMUSG00000028577.14	ENSMUST00000129748.2	3886	4	-607	0	-607	0	multi-exon	FALSE	canonical	3	672	junction_2	16.2138486760204	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCATCCTGGTGCC	NA	False	NA	-10	True	ATTAAA	-5	NA	94465232	94455750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402
ES.23732.22	chr4	-	4259	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_12	198.520499921013	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCATCCTGGTGCC	NA	False	NA	-10	True	ATTAAA	-5	NA	94491497	94455750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
ES.23732.23	chr4	-	4565	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-207	-1574	-207	-79	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTGTTTCATTTATG	NA	False	NA	-89	True	ATTAAA	-37	NA	94491688	94455829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.24	chr4	-	2789	15	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	8	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.343229101076	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAATGGAGTAGA	NA	False	NA	0	True	AATAAA	-27	NA	94491410	94457391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458103_94459434_94459543_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.25	chr4	-	2746	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	199.996745535651	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTTTTCCTGTGTA	NA	False	NA	-10	True	AATAAA	-17	NA	94491447	94457401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466629_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.26	chr4	-	2979	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-193	-2	-193	2	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTTTTCCTGTGTA	NA	False	NA	-10	True	AATAAA	-17	NA	94491674	94457401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.27	chr4	-	5082	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-4	2	intron_retention	FALSE	canonical	3	626	junction_11	55.1790016421303	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTTTTCCTGTGTA	NA	False	NA	-10	True	AATAAA	-17	NA	94491485	94457401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.28	chr4	-	2798	15	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	253.899787398131	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491459	94457403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470069_94470106_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.29	chr4	-	2547	13	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	268.684552754506	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491445	94457403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474538_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
ES.23732.3	chr4	-	5432	15	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-31	1374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.321320266727	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCTCAGTGGTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	94491449	94454376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94454713_94455059_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.30	chr4	-	2670	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	201.157214268022	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491370	94457403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475818_94478113_94478312_94491113
ES.23732.32	chr4	-	2507	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_12	198.520499921013	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491398	94457403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
ES.23732.33	chr4	-	2745	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-7	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	199.996745535651	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGTGAGGTTTTCCTG	NA	False	NA	-14	True	AATAAA	-13	NA	94491425	94457405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463491_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.34	chr4	-	2657	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	112	junction_4	172.276828260668	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGTGAGGTTTTCCTG	NA	False	NA	-14	True	AATAAA	-13	NA	94491425	94457405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.36	chr4	-	5059	13	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-29	-2	intron_retention	FALSE	canonical	0	0	junction_4	206.414412583575	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGTGAGGTTTTCCTG	NA	False	NA	-14	True	AATAAA	-13	NA	94491447	94457405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463491_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.37	chr4	-	2462	12	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	3	29	junction_11	250.828379640458	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGTGAGGTTTTCCT	NA	False	NA	-15	True	AATAAA	-12	NA	94491425	94457406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
ES.23732.39	chr4	-	2734	15	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.343229101076	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTGTGAGGTTTTCC	NA	False	NA	-16	True	AATAAA	-11	NA	94491347	94457407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94458408_94458497_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.4	chr4	-	5023	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	1	-2240	1	587	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCCTTAGGAATATAT	NA	False	NA	NA	False	ATTAAA	-19	NA	94491480	94455163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.40	chr4	-	2679	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-31	-4	combination_of_known_splicesites	FALSE	canonical	3	44	junction_3	196.080110470752	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTGTGAGGTTTTCC	NA	False	NA	-16	True	AATAAA	-11	NA	94491449	94457407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.41	chr4	-	2909	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-210	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	194.724049930412	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTGTGAGGTTTTCC	NA	False	NA	-16	True	AATAAA	-11	NA	94491691	94457407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478231_94491113
ES.23732.42	chr4	-	2687	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	201.40908942194	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTTGTGAGGTTTTCC	NA	False	NA	-16	True	AATAAA	-11	NA	94491410	94457407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462285_94463388_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.43	chr4	-	2435	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	133	216	24	-216	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGCTGTAGACTTGT	NA	False	NA	-82	True	AATAAA	-35	NA	94491348	94457619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.5	chr4	-	4826	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	-19	-2023	-19	370	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCTTATTGACTGTAAT	NA	False	NA	-3	True	AATAAA	-23	NA	94491500	94455380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.6	chr4	-	4612	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-2	367	combination_of_known_splicesites	FALSE	canonical	3	29	junction_12	198.520499921013	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACATCTTATTGACTGT	NA	False	NA	-6	True	AATAAA	-20	NA	94491483	94455383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
ES.23732.7	chr4	-	4635	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-22	366	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	194.724049930412	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACATCTTATTGACTG	NA	False	NA	-7	True	AATAAA	-19	NA	94491394	94455384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478231_94491113
ES.23732.8	chr4	-	4635	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	-10	366	combination_of_known_junctions	FALSE	canonical	3	112	junction_4	172.276828260668	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACACATCTTATTGACTG	NA	False	NA	-7	True	AATAAA	-19	NA	94491382	94455384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23732.9	chr4	-	4674	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	11	365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.613398328717	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACATCTTATTGACT	NA	False	NA	-8	True	AATAAA	-18	NA	94491361	94455385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470725_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ES.23733.1	chr4	-	2700	2	NNC	ENSMUSG00000049799.14	novel	2780	5	NA	NA	12142	4415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAAAAAAAGCATAAAC	7096	False	NA	NA	False	NA	NA	NA	94526211	94520474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94520972_94524008
ES.23733.2	chr4	-	3367	1	Genic_Genomic	ENSMUSG00000049799.14	novel	NA	NA	NA	NA	12142	2045	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACTCTGTCTTGAAAA	7096	False	NA	NA	False	NA	NA	NA	94526211	94522844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_94522800_94526200
ES.23734.1	chr4	-	184	1	Intergenic	novelGene_19471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	94542064	94541880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_94541900_94542100
ES.23735.1	chr4	-	173	1	Intergenic	novelGene_19472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	1798	False	NA	NA	False	NA	NA	NA	94554971	94554798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_94554800_94555000
ES.23736.1	chr4	-	187	1	Intergenic	novelGene_19474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	6335	False	NA	NA	False	NA	NA	NA	94596911	94596724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_94596700_94596900
ES.23737.1	chr4	+	4721	23	FSM	ENSMUSG00000006386.16	ENSMUST00000071168.6	4176	23	-288	-257	-59	0	multi-exon	TRUE	canonical	1	2	junction_15	3.26672429251472	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCCAGGATTGTGTCT	211	False	NA	NA	False	AATAAA	-18	NA	94627466	94763176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94699524_94699654_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ES.23738.1	chr4	-	5372	1	Intergenic	novelGene_19475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATACCATTTGCCTACT	NA	False	NA	NA	False	NA	NA	NA	94685192	94679820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_94679800_94685200
ES.23739.1	chr4	-	135	1	Intergenic	novelGene_19476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	94798578	94798443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_94798400_94798600
ES.2374.1	chr10	-	7823	1	Intergenic	novelGene_1814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	14907348	14899525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_14899500_14907300
ES.23740.1	chr4	+	183	1	Intergenic	novelGene_19477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	94816245	94816428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_94816200_94816400
ES.23741.1	chr4	+	2890	1	Antisense	novelGene_ENSMUSG00000062627.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAAACTCACATTCAGTT	NA	False	NA	NA	False	NA	NA	NA	94831348	94834238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_94831300_94834200
ES.23742.1	chr4	-	7431	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	-8	-3	-8	3	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAGCAATGTTATTGAA	NA	False	NA	3	True	AATAAA	-28	NA	94867345	94830273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.10	chr4	-	5182	19	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	3	-2198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.729234410176	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATACACCCTTCAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	94867334	94832497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858850_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.12	chr4	-	5165	20	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	11	-2236	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	19.8294668670816	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATTATTTTTCCTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	94867326	94832535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840615_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.13	chr4	-	5138	19	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	8	-2241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	19.3796539611604	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGGATTATTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	94867304	94832540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840615_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858836_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.14	chr4	-	3737	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	3	3680	3	1305	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAACTAGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	94867334	94833956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.15	chr4	-	3302	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	30	4088	5	897	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAAATTGTTCATGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	94867307	94834364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.16	chr4	-	3295	20	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	5	896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.1239923785535	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCAAATTGTTCATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	94867307	94834365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854103_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.17	chr4	-	2346	14	ISM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	11184	4597	2735	388	3prime_fragment	FALSE	canonical	3	31	junction_8	11.0131712430345	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTTCTGGTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	94856153	94834873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106
ES.23742.18	chr4	-	2395	17	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	5	145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.061927646078	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCATAAAACTCTAAACT	NA	False	NA	NA	False	TATAAA	-16	NA	94867307	94835116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94863435_94863530_94867240
ES.23742.19	chr4	-	5156	18	NIC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	11	124	intron_retention	FALSE	canonical	1	5	junction_13	18.4392765697363	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATTATGTTTTTTTTT	NA	False	NA	NA	False	TTTAAA	-5	NA	94867326	94835137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.2	chr4	-	6039	11	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	-6913	2	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_5	17.1292148097921	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTAGCAATGTTATTGA	NA	False	NA	2	True	AATAAA	-27	NA	94848668	94830274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840615_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564
ES.23742.20	chr4	-	2532	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	25	4863	0	122	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAATTATGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	94867312	94835139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.21	chr4	-	2628	21	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	2	122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	20.6663978477141	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAATTATGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	94867310	94835139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94864367_94864466_94867240
ES.23742.22	chr4	-	2522	19	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	4	122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	16.729234410176	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAATTATGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	94867308	94835139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857304_94858850_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.23	chr4	-	3117	10	NIC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	1593	-4225	intron_retention	FALSE	canonical	3	31	junction_3	9.45685459153476	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGTGCTGCATGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	94857295	94839486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216
ES.23742.3	chr4	-	7386	19	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.9477713102721	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTGTAAATTATTAGC	NA	False	NA	-9	True	AATAAA	-16	NA	94867320	94830285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836394_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858841_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.6	chr4	-	7323	20	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	10	-79	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	19.8294668670816	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTTGACGTATTATCT	NA	False	NA	-102	True	ATTAAA	-13	NA	94867327	94830378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840615_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.7	chr4	-	7232	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	3	185	3	-162	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTGTAAAATTATAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	94867334	94830461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.8	chr4	-	7123	20	NNC	ENSMUSG00000062627.10	novel	7420	20	NA	NA	1	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.4765929472108	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAATGTTTGTAAAATT	NA	False	NA	NA	False	ATTAAA	-12	NA	94867314	94830466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839212_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23742.9	chr4	-	5218	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	0	2202	0	-2179	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGAATTTGAGACTGT	NA	False	NA	NA	False	AATAAA	-35	NA	94867337	94832478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ES.23743.1	chr4	-	3178	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	4	7	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTTCCTTTCCCTT	5513	False	NA	NA	False	AATAAA	-26	NA	94940455	94937277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94937300_94940500
ES.23743.2	chr4	-	2595	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	28	566	28	-566	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTGTTTCTGAAAAT	5537	False	NA	99	True	AATAAA	-15	NA	94940431	94937836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_94937800_94940400
ES.23744.1	chr4	+	1632	5	NNC	ENSMUSG00000028573.19	novel	3037	13	NA	NA	0	2263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.7127067751225	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGCTTCTTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	95445747	95491557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95490486
ES.23744.2	chr4	+	1807	15	NIC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	8.70491299233264	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGGAGTCACTTATGT	NA	False	NA	6	True	AATAAA	-19	NA	95445748	95815172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ES.23744.3	chr4	+	1888	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	12	-9	0	9	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTCTGTGTCTGGATG	NA	False	NA	19	True	AATAAA	-32	NA	95445755	95815185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ES.23744.4	chr4	+	2813	1	Intergenic	novelGene_19478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGGGAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	95460818	95463631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_95460800_95463600
ES.23744.5	chr4	+	3094	3	Intergenic	novelGene_19481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATATTTTTAAAACGGTA	NA	False	NA	NA	False	NA	NA	NA	95661115	95664428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_95661381_95661521_95662358_95662435
ES.23744.6	chr4	+	5761	1	NIC	ENSMUSG00000028573.19	novel	1891	16	NA	NA	-13223	1508	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCTCACACCTACAGCAT	NA	False	NA	NA	False	NA	NA	NA	95724638	95730399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95724600_95730400
ES.23745.1	chr4	-	4502	1	Intergenic	novelGene_19479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAAGATACTAGAACAAG	NA	False	NA	NA	False	NA	NA	NA	95559587	95555085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_95555100_95559600
ES.23745.2	chr4	-	3379	1	Intergenic	novelGene_19480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAGGTCAGAGGTGAAA	NA	False	NA	NA	False	AATATA	-23	NA	95559587	95556208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_95556200_95559600
ES.23746.1	chr4	-	4491	2	FSM	ENSMUSG00000044125.7	ENSMUST00000143332.2	665	2	3	-3829	3	3301	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGGCTTAATATTTCTT	NA	False	NA	NA	False	NA	NA	NA	95855269	95844650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_95848895_95855022
ES.23747.1	chr4	+	5576	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	-58	-1	-58	1	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGGTTTTAGTGGCT	4656	False	NA	33	True	AATAAA	-20	NA	95855418	95913651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.10	chr4	+	6482	20	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	45	-974	intron_retention	FALSE	canonical	3	114	junction_6	16.0945957103722	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTCATAAATTTGTAA	4759	False	NA	NA	False	AATAAA	-17	NA	95855521	95912654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.13	chr4	+	7459	20	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-60	-1	intron_retention	FALSE	canonical	3	114	junction_6	16.0945957103722	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGGTTTTAGTGG	4777	False	NA	31	True	AATAAA	-44	NA	95855539	95913649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.14	chr4	+	5949	21	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-60	-4	intron_retention	FALSE	canonical	3	114	junction_6	15.7463487831306	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGCTGTGGTTTTAG	4777	False	NA	28	True	AATAAA	-41	NA	95855539	95913646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.15	chr4	+	5409	22	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-50	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	53.1642302130827	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTCTGATTCAGTT	4787	False	NA	14	True	AATAAA	-41	NA	95855549	95913632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95901434_95901576_95903044_95903139_95903901_95903946_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.16	chr4	+	7303	21	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-46	0	intron_retention	FALSE	canonical	3	114	junction_6	15.0635321223145	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGGTTTTAGTGGC	4791	False	NA	32	True	AATAAA	-45	NA	95855553	95913650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95909874_95910403
ES.23747.17	chr4	+	5366	22	NNC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	34.8651435002427	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTGCTTCTGA	4791	False	NA	7	True	AATAAA	-34	NA	95855553	95913625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901483_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.18	chr4	+	9308	19	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-46	-1	intron_retention	FALSE	canonical	3	114	junction_6	15.6754309606616	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGGTTTTAGTGG	4791	False	NA	31	True	AATAAA	-44	NA	95855553	95913649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95905263_95905824_95905926_95907839_95909874_95910403
ES.23747.19	chr4	+	5510	22	NNC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.6917099496267	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTGCTTCTGA	4801	False	NA	7	True	AATAAA	-34	NA	95855563	95913625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905074_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.2	chr4	+	4637	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	-29	909	-29	-887	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTAGTTTTAAGTAG	4685	False	NA	NA	False	ATTAAA	-16	NA	95855447	95912741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.22	chr4	+	4468	22	NNC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	2	-1070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	34.7964603198896	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTGTATTTGCTTATA	4839	False	NA	NA	False	AATAAA	-13	NA	95855601	95912558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904477_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.24	chr4	+	3281	6	NNC	ENSMUSG00000028572.14	novel	1506	8	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.2047295408061	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTCTGATTCAGTT	4862	False	NA	14	True	AATAAA	-41	NA	95855624	95913632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881429_95910856
ES.23747.25	chr4	+	5017	20	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	56	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	36.482606943834	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTCTGCTTCTGA	NA	False	NA	7	True	AATAAA	-34	NA	95862678	95913625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95909804_95909874_95910403
ES.23747.26	chr4	+	3876	11	ISM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	37099	214	4	-192	3prime_fragment	FALSE	canonical	3	124	junction_9	12.6526677028997	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGTAGTTACTAAACT	NA	False	NA	NA	False	TATAAA	-21	NA	95892575	95913436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.27	chr4	+	6530	7	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-91	-8	intron_retention	FALSE	canonical	1	2	junction_2	55.2469204772739	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCAGTTTGCTGTGGTT	NA	False	NA	24	True	AATAAA	-37	NA	95901438	95913642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95901576_95903044_95903946_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95909874_95910403
ES.23747.4	chr4	+	5613	23	NNC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	43.8639896358831	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGGTTTTAGTGG	4709	False	NA	31	True	AATAAA	-44	NA	95855471	95913649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95859752_95859845_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.5	chr4	+	5581	23	NNC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	44.8240822227008	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGGTTTTAGTGGC	4709	False	NA	32	True	AATAAA	-45	NA	95855471	95913650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95908429_95908489_95909804_95909874_95910403
ES.23747.6	chr4	+	4410	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	16	1091	16	-1069	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATTTGCTTATAA	4730	False	NA	NA	False	AATAAA	-14	NA	95855492	95912559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.7	chr4	+	5540	23	NIC	ENSMUSG00000028572.14	novel	5517	22	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	44.2947723721901	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGCTGTGGTTTTA	4730	False	NA	27	True	AATAAA	-40	NA	95855492	95913645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95903901_95903946_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.8	chr4	+	4688	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	21	808	21	-786	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAGGGTGAGATTCTTT	4735	False	NA	NA	False	NA	NA	NA	95855497	95912842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23747.9	chr4	+	4948	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	42	527	42	-505	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTTTATTCTATTTT	4756	False	NA	NA	False	GATAAA	-20	NA	95855518	95913123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ES.23748.1	chr4	+	5583	1	Intergenic	novelGene_19482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGAGCCTTGTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	96213643	96219226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_96213600_96219200
ES.23749.1	chr4	-	3730	9	NNC	ENSMUSG00000052914.5	novel	3605	9	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.65359456941537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCCTGGACCTCCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	96441883	96404376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_96406443_96411939_96412079_96414075_96414264_96417621_96417761_96419868_96420046_96423682_96423844_96424232_96424383_96433935_96434099_96441336
ES.23749.2	chr4	-	1853	9	FSM	ENSMUSG00000052914.5	ENSMUST00000030303.6	3605	9	130	1622	130	-1622	multi-exon	FALSE	canonical	1	1	junction_1	1.40867845869808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATGAATTAAACATCA	NA	False	NA	NA	False	NA	NA	NA	96441768	96405996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_96406443_96411939_96412079_96414075_96414264_96417621_96417761_96419868_96420046_96423682_96423844_96424232_96424383_96433935_96434099_96441478
ES.2375.1	chr10	+	185	1	Intergenic	novelGene_1815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTATAAGGA	NA	False	NA	NA	False	NA	NA	NA	15153953	15154138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_15154000_15154100
ES.23750.1	chr4	-	159	1	Intergenic	novelGene_19483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	96464197	96464038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_96464000_96464200
ES.23751.1	chr4	-	1869	3	Intergenic	novelGene_19484	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATGAAATCTTTCAAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	96986623	96956415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_96958054_96960263_96960347_96986475
ES.23752.1	chr4	+	3792	7	ISM	ENSMUSG00000028565.19	ENSMUST00000052018.12	9249	10	236461	4607	103247	-4607	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97902516	98002501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_97902568_97909063_97909192_97929787_97929917_97951249_97951429_97953517_97953684_97969961_97970054_97999454
ES.23753.1	chr4	-	4672	1	Intergenic	novelGene_19485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAATGTTATCATGTTA	NA	False	NA	NA	False	NA	NA	NA	97914394	97909722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_97909700_97914400
ES.23754.1	chr4	-	986	7	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	3	529	junction_2	26.6958174002346	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGACCTGTTATTAAGA	NA	False	NA	-2	True	AATAAA	-20	NA	98271500	98243604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268925_98271302
ES.23754.11	chr4	-	4664	6	NNC	ENSMUSG00000028563.17	novel	813	6	NA	NA	3000	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	223.805808682438	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATTGACCTGTTAT	NA	False	NA	-7	True	AATAAA	-15	NA	98268297	98243609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98266562_98267642
ES.23754.12	chr4	-	822	7	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	-8	82	at_least_one_novel_splicesite	FALSE	non_canonical	3	529	junction_2	26.6958174002346	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCTTTCTTAAAATCA	NA	False	NA	NA	False	AATATA	-19	NA	98271491	98243759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268925_98271302
ES.23754.2	chr4	-	960	7	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.976328888134	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGACCTGTTATTA	NA	False	NA	-5	True	AATAAA	-17	NA	98271482	98243607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268932_98271314
ES.23754.3	chr4	-	950	7	NNC	ENSMUSG00000028563.17	novel	952	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_5	208.412251719199	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGACCTGTTATTA	NA	False	NA	-5	True	AATAAA	-17	NA	98271482	98243607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263251_98268854_98268925_98271302
ES.23754.7	chr4	-	868	6	NNC	ENSMUSG00000028563.17	novel	1027	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	223.009416841532	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGACCTGTTATTA	NA	False	NA	-5	True	AATAAA	-17	NA	98271481	98243607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98271328
ES.23754.9	chr4	-	3341	6	ISM	ENSMUSG00000028563.17	ENSMUST00000102793.11	1027	7	61	3	1	-3	intron_retention	FALSE	canonical	3	529	junction_2	29.1410363576864	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATTGACCTGTTAT	NA	False	NA	-7	True	AATAAA	-15	NA	98271482	98243609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854
ES.23755.1	chr4	+	3327	20	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.58539845492486	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTCTTTTAAATTCC	NA	False	NA	NA	False	AATAAA	-18	NA	98284009	98385868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284103_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23755.10	chr4	+	5733	42	NIC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	6.0527131197058	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAACTTCCTCGCAATG	NA	False	NA	NA	False	AATAAA	-20	NA	98284091	98606591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.11	chr4	+	5958	40	NIC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	6.09134931596866	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACGATGTTTGAGAGAAG	NA	False	NA	NA	False	AATAAA	-17	NA	98284091	98577248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362
ES.23755.12	chr4	+	6017	44	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	6.19347342240785	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTAACTTCCTCGCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	98284091	98606590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457364_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.13	chr4	+	3299	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	67	221974	3	-4	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATTTTCTTTTAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	98284094	98385866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23755.14	chr4	+	1290	8	NNC	ENSMUSG00000061859.18	novel	2104	15	NA	NA	14	11752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.99744857273052	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGTCAGTATGTTTG	NA	False	NA	NA	False	AAGAAA	-31	NA	98284105	98305666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98305315
ES.23755.15	chr4	+	11022	2	Genic_Genomic	ENSMUSG00000061859.18	novel	252	3	NA	NA	1256	2686	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATTAAACACTGTTGC	NA	False	NA	NA	False	NA	NA	NA	98285384	98296600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_98288519_98288712
ES.23755.16	chr4	+	3847	26	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	20952	80371	144	-35258	internal_fragment	FALSE	canonical	2	5	junction_15	5.37460696237409	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTGGTAATTTGATA	NA	False	NA	NA	False	AATAAA	-12	NA	98304979	98527469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927
ES.23755.17	chr4	+	1718	1	NIC	ENSMUSG00000061859.18	novel	7416	45	NA	NA	855	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGATTTTCTTTTAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	98384147	98385865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98384100_98385900
ES.23755.18	chr4	+	3409	17	NNC	ENSMUSG00000061859.18	novel	3755	18	NA	NA	22029	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2.2220486043289	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGGTGTGTCTTT	NA	False	NA	NA	False	AATACA	-11	NA	98457238	98607837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565486_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.19	chr4	+	138	1	Intergenic	novelGene_19488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98586046	98586184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98586000_98586200
ES.23755.2	chr4	+	4967	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	-7	220380	-1	1590	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTATTAATTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	98284020	98387460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23755.3	chr4	+	6105	44	FSM	ENSMUSG00000061859.18	ENSMUST00000041284.10	7340	44	-7	1242	-1	3	multi-exon	FALSE	canonical	1	2	junction_32	5.98203548240142	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTCGCAATGAACTATT	NA	False	NA	NA	False	AATAAA	-27	NA	98284020	98606598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.4	chr4	+	4898	20	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	1	1588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.58539845492486	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTCTATTAATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	98284028	98387458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284103_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23755.5	chr4	+	3907	26	NIC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-29	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.95986577030054	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTGTGGCTTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	98284062	98427437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98284162_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195
ES.23755.6	chr4	+	6040	44	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.58595453884014	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCCTCGCAATGAACTA	NA	False	NA	NA	False	AATAAA	-25	NA	98284079	98606596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284162_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98481503_98481556_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.7	chr4	+	5965	44	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-12	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.22760997607121	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTAGCAGTGTAATT	NA	False	NA	NA	False	AATAAA	-5	NA	98284079	98606576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284103_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ES.23755.8	chr4	+	3249	19	NNC	ENSMUSG00000061859.18	novel	7340	44	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.70709975857449	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTTAAATTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	98284090	98385870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98284162_98293773_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23755.9	chr4	+	4715	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	64	220561	0	1409	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCGTGTTGCTGCTTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	98284091	98387279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
ES.23756.1	chr4	-	177	1	Intergenic	novelGene_19486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGACATGCA	NA	False	NA	NA	False	NA	NA	NA	98301133	98300956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98301000_98301100
ES.23757.1	chr4	-	3246	2	Antisense	novelGene_ENSMUSG00000061859.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	98416548	98413160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_98415052_98415193
ES.23758.1	chr4	-	338	1	Intergenic	novelGene_19487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-9	NA	98430192	98429854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98429900_98430200
ES.23759.1	chr4	+	3498	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-462	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTAATGTCCCTGCTT	NA	False	NA	36	True	NA	NA	NA	98614508	98626721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98624936_98625057
ES.23759.10	chr4	+	3255	4	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_1	189.677504084052	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615030	98626717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615239_98615631_98615708_98621379_98622316_98624682
ES.23759.11	chr4	+	3001	3	FSM	ENSMUSG00000087166.10	ENSMUST00000152889.9	705	3	60	-2356	1	-2116	multi-exon	FALSE	canonical	3	192	junction_2	120.5	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTACCCCAGTGGGTCTG	NA	False	NA	NA	False	AATAAA	-1	NA	98615030	98624237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98615078_98615631_98615708_98621359
ES.23759.12	chr4	+	3275	4	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_1	181.800867862493	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615030	98626717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615239_98615631_98615708_98621359_98622316_98624682
ES.23759.13	chr4	+	3060	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	188.179933839929	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98615030	98626716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98625011_98625063
ES.23759.14	chr4	+	3265	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_2	223.204502642756	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATTGGTTTACTTAAT	NA	False	NA	26	True	NA	NA	NA	98615030	98626711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621027_98621185_98621359_98622316_98624682
ES.23759.15	chr4	+	2715	3	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	46	2746	1	2090	5prime_fragment	FALSE	canonical	3	363	junction_2	35	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGTTAAAATTGAAGCT	NA	False	NA	NA	False	NA	NA	NA	98615030	98623971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98615078_98615631_98615708_98621379
ES.23759.16	chr4	+	5356	4	NNC	ENSMUSG00000087166.10	novel	705	3	NA	NA	1	-2	intron_retention	TRUE	non_canonical	0	0	junction_3	177.14839981088	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTTACTTAATGTCC	NA	False	NA	30	True	NA	NA	NA	98615030	98626715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621359_98623691_98623813
ES.23759.17	chr4	+	3201	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_2	223.453994146446	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98615030	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98617502_98617613_98621379_98622316_98624682
ES.23759.18	chr4	+	3239	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_2	223.204502642756	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98615035	98626716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621053_98621185_98621359_98622316_98624682
ES.23759.19	chr4	+	3006	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	188.179933839929	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615036	98626717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682_98624962_98625063
ES.23759.2	chr4	+	3599	4	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	-451	-8	-437	8	intron_retention	FALSE	canonical	3	363	junction_2	40.8765077873452	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTCCCTGCTTATTT	NA	False	NA	40	True	NA	NA	NA	98614533	98626725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682
ES.23759.20	chr4	+	2160	4	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	189.78291692235	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTTACTTAATGTCC	NA	False	NA	30	True	NA	NA	NA	98615039	98626715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621379_98621744_98625033
ES.23759.22	chr4	+	3131	3	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	46	-3	intron_retention	FALSE	canonical	0	0	junction_1	230	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98615075	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615239_98621379_98622316_98624682
ES.23759.23	chr4	+	3047	3	ISM	ENSMUSG00000087166.10	ENSMUST00000154279.3	2942	5	644	3	599	-3	intron_retention	FALSE	canonical	3	363	junction_1	48.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98615628	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98615708_98621379_98622316_98624682
ES.23759.24	chr4	+	2720	3	NNC	ENSMUSG00000087166.10	novel	2547	2	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	230	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98621483	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98622316_98624682_98624911_98625054
ES.23759.25	chr4	+	2435	3	NNC	ENSMUSG00000087166.10	novel	2547	2	NA	NA	407	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	230	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98621846	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98622316_98624682_98624961_98625026
ES.23759.3	chr4	+	3427	4	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-245	8	intron_retention	FALSE	canonical	3	192	junction_2	120.477752671972	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTCCCTGCTTATTT	NA	False	NA	40	True	NA	NA	NA	98614725	98626725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682
ES.23759.4	chr4	+	3318	3	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-233	7	intron_retention	FALSE	canonical	2	9	junction_1	225.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATGTCCCTGCTTATT	NA	False	NA	39	True	NA	NA	NA	98614737	98626724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98615078_98621379_98622316_98624682
ES.23759.5	chr4	+	3284	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-227	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAATGTCCCTGCTTA	NA	False	NA	37	True	NA	NA	NA	98614743	98626722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98624962_98625063
ES.23759.6	chr4	+	3015	5	NNC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	184.711937892492	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTACTTAATGTC	NA	False	NA	29	True	NA	NA	NA	98614986	98626714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98615078_98615631_98615708_98621379_98622316_98624682_98624931_98625050
ES.23759.7	chr4	+	8795	3	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	17	0	intron_retention	FALSE	canonical	3	433	junction_1	13.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTACTTAATGTCCCT	NA	False	NA	32	True	NA	NA	NA	98615001	98626717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98615078_98615631_98622316_98624682
ES.23759.8	chr4	+	3050	3	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	1	junction_1	229.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTTACTTAATGTCCC	NA	False	NA	31	True	NA	NA	NA	98615017	98626716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98615078_98621359_98622316_98624682
ES.23759.9	chr4	+	2804	4	NIC	ENSMUSG00000087166.10	novel	2942	5	NA	NA	1	54	intron_retention	FALSE	canonical	3	192	junction_2	120.477752671972	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCATCACGTCTCTGTC	NA	False	NA	NA	False	AATACA	-22	NA	98615030	98626407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98615078_98615631_98615708_98621359_98622316_98624682
ES.2376.1	chr10	+	133	1	Intergenic	novelGene_1816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15413727	15413860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_15413700_15413900
ES.23760.1	chr4	+	3982	1	Intergenic	novelGene_19489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGACACCAGGCATCCT	3798	False	NA	NA	False	NA	NA	NA	98669640	98673622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98669600_98673600
ES.23761.1	chr4	+	1814	2	Antisense	novelGene_ENSMUSG00000035407.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACAGATTAGCATTT	8895	False	NA	NA	False	NA	NA	NA	98674737	98680025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_98674887_98678360
ES.23761.2	chr4	+	1912	3	Antisense	novelGene_ENSMUSG00000035407.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAGATTAGCATT	8974	False	NA	NA	False	NA	NA	NA	98674816	98680024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_98674887_98678050_98678229_98678360
ES.23762.1	chr4	-	4966	10	FSM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	-163	-8	-163	8	multi-exon	FALSE	canonical	1	2	junction_7	7.99228022593531	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATTTCTTTGCTCTTGAT	NA	False	NA	-3	True	ATTAAA	-23	NA	98705937	98643126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500_98668430_98673895_98673979_98705662
ES.23762.10	chr4	-	158	1	Intergenic	novelGene_19490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATGAAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	98672386	98672228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98672200_98672400
ES.23762.2	chr4	-	4908	10	NNC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	9.18936583472681	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTACGATTTCTTTG	NA	False	NA	-11	True	ATTAAA	-15	NA	98705933	98643134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665281_98665348_98666500_98668430_98673895_98673979_98705662
ES.23762.3	chr4	-	4282	3	ISM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	49682	0	3620	0	3prime_fragment	FALSE	canonical	3	23	junction_1	1.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTACGATTTCTTTG	NA	False	NA	-11	True	ATTAAA	-15	NA	98656092	98643134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98644823_98649639_98649841_98653699
ES.23762.4	chr4	-	4964	10	NNC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	8.45175122477183	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTACGATTTCTTTG	NA	False	NA	-11	True	ATTAAA	-15	NA	98705950	98643134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666507_98668430_98673895_98673979_98705662
ES.23762.5	chr4	-	2880	4	NNC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	4433	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.6141675934562	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTCTTACGATTTCTT	NA	False	NA	-13	True	ATTAAA	-13	NA	98655279	98643136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98644823_98649639_98649841_98653699_98653843_98654429
ES.23762.6	chr4	-	3063	8	NNC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	-7163	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.7892614791424	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGGTCTTACGATTTC	NA	False	NA	-15	True	ATTAAA	-11	NA	98666875	98643138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98644823_98649639_98649841_98653699_98653864_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500
ES.23762.7	chr4	-	3630	6	NNC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	-8238	183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.0233106921513	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGAGTTTTAAAGCGCA	NA	False	NA	NA	False	AATAGA	-17	NA	98667950	98644362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98645306_98658848_98659713_98661619_98661708_98662910_98663130_98665281_98665348_98666500
ES.23762.8	chr4	-	5391	2	Genic_Genomic	ENSMUSG00000035407.9	novel	4795	10	NA	NA	2548	-7139	multi-exon	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAATAATTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	98657164	98651684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_98652346_98652434
ES.23762.9	chr4	-	5164	1	NIC	ENSMUSG00000035407.9	novel	4795	10	NA	NA	2864	-7139	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAATAATTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	98656848	98651684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98651700_98656800
ES.23763.1	chr4	+	155	1	Intergenic	novelGene_19491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	98716883	98717038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98716900_98717000
ES.23764.1	chr4	+	1829	1	Intergenic	novelGene_19492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	4992	False	NA	NA	False	NA	NA	NA	98738942	98740771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98738900_98740800
ES.23765.1	chr4	+	1365	3	Intergenic	novelGene_19493	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGCAATGAAACAAGCG	NA	False	NA	NA	False	AAGAAA	-12	NA	98752581	98754226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98752729_98752801_98753480_98753686
ES.23765.2	chr4	+	160	1	Intergenic	novelGene_19494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98753512	98753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98753500_98753700
ES.23766.1	chr4	+	174	1	Intergenic	novelGene_19495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGAAAATGGGCT	NA	False	NA	NA	False	NA	NA	NA	98799464	98799638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98799500_98799600
ES.23767.1	chr4	+	3996	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-419	0	-419	0	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811627	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.11	chr4	+	3495	9	NNC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.986358002321	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812000	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814819_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.12	chr4	+	5830	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-42	0	intron_retention	FALSE	canonical	3	279	junction_1	97.7656506600329	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812004	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.13	chr4	+	3387	8	NNC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	211.293103319072	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98812004	98823777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821069_98821263_98822306
ES.23767.14	chr4	+	3637	1	Genic_Genomic	ENSMUSG00000028560.12	novel	NA	NA	NA	NA	-40	-864	mono-exon	FALSE	NA	NA	NA	NA	NA	538	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTTTTCTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	98812006	98815643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_98812000_98815600
ES.23767.15	chr4	+	3451	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-36	162	-36	-162	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGCTCTGTACTCTAG	NA	False	NA	NA	False	NA	NA	NA	98812010	98823618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.16	chr4	+	3204	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-86	409	-17	-409	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTGGAGTAATTATCT	NA	False	NA	NA	False	AATAAA	-22	NA	98812029	98823371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.17	chr4	+	3543	9	NNC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	192.695193245706	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812033	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814738_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.18	chr4	+	3701	9	NNC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	205.365185401518	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812034	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821356_98822306
ES.23767.19	chr4	+	3181	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-12	408	-12	-408	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGGAGTAATTATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	98812034	98823372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.2	chr4	+	3727	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-370	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811676	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.21	chr4	+	3087	9	NNC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	-22	-408	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	205.12298140384	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGGAGTAATTATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	98812178	98823372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822275
ES.23767.22	chr4	+	2762	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	88	677	3	-677	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGAGTCTTTAGTTTA	NA	False	NA	NA	False	ATTAAA	-34	NA	98812203	98823103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.23	chr4	+	4479	8	ISM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	92	0	7	0	intron_retention	FALSE	canonical	3	170	junction_1	149.404532346627	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812207	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060
ES.23767.24	chr4	+	6667	7	NIC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	8	-3	intron_retention	FALSE	canonical	3	279	junction_1	101.233640653688	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98812208	98823777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060
ES.23767.25	chr4	+	3173	8	NNC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	211.293103319072	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98812208	98823777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820575_98821060_98821263_98822306
ES.23767.26	chr4	+	2866	10	NNC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	202.059458307098	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGATTTTTTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	98812208	98823777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306_98823112_98823676
ES.23767.27	chr4	+	3348	10	NNC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	13	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	202.059458307098	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAACAACCAAATGTGTG	NA	False	NA	4	True	AATAAA	-10	NA	98812213	98823766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306_98822579_98822645
ES.23767.28	chr4	+	4652	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	15	1464	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTAAATGTGTACTGT	NA	False	NA	NA	False	AATAAA	-24	NA	98812215	98825244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.29	chr4	+	2710	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	171	696	17	-696	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTAAAGTTGATTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	98812217	98823084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.3	chr4	+	3021	8	NNC	ENSMUSG00000028560.12	novel	546	4	NA	NA	-364	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.450875177107	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811682	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98811781_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.30	chr4	+	6048	7	NIC	ENSMUSG00000028560.12	novel	3527	9	NA	NA	90	-5	intron_retention	FALSE	canonical	3	279	junction_1	101.862107227805	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTGTGATTTTTTTT	NA	False	NA	13	True	AATAAA	-19	NA	98812290	98823775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98814912_98816470_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.31	chr4	+	3258	7	ISM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	4020	0	-198	0	3prime_fragment	FALSE	canonical	3	528	junction_2	20.6397674405503	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98816135	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.4	chr4	+	3922	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	-395	0	-326	0	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811720	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.5	chr4	+	4940	8	ISM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	-319	0	-319	0	intron_retention	FALSE	canonical	3	153	junction_1	154.082405728565	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811727	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060
ES.23767.6	chr4	+	3262	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-292	-387	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTTATAGGTCTGGC	NA	False	NA	NA	False	AATAAA	-44	NA	98811754	98823393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23767.8	chr4	+	3466	8	NNC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.450875177107	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98811863	98823780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_98812471_98816534_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ES.23768.1	chr4	+	186	1	Intergenic	novelGene_19498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATTAATATATT	NA	False	NA	NA	False	NA	NA	NA	98847665	98847851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98847700_98847900
ES.23769.1	chr4	+	4657	1	Antisense	novelGene_ENSMUSG00000028556.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AAGAAA	-21	NA	98870599	98875256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_98870600_98875300
ES.2377.1	chr10	+	3135	1	Genic_Genomic	ENSMUSG00000112227.2	novel	NA	NA	NA	NA	-119	-12273	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGATAAATTAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	15667405	15670540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_15667400_15670500
ES.2377.2	chr10	+	513	2	NNC	ENSMUSG00000112227.2	novel	628	3	NA	NA	-108	-57	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGCTGACTTTTAATAA	NA	False	NA	NA	False	AATAAA	-21	NA	15667416	15682756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_15667792_15682618
ES.23770.1	chr4	+	1959	1	Intergenic	novelGene_19499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTATAAACACCTACATA	NA	False	NA	NA	False	NA	NA	NA	98886277	98888236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98886300_98888200
ES.23771.1	chr4	+	203	1	Intergenic	novelGene_19500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGTAAAACTAAGTCAAA	NA	False	NA	NA	False	NA	NA	NA	98901565	98901768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_98901600_98901800
ES.23772.1	chr4	+	2330	1	Antisense	novelGene_ENSMUSG00000028556.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99008517	99010847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_99008500_99010800
ES.23773.1	chr4	-	176	1	Intergenic	novelGene_19496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	2546	False	NA	NA	False	NA	NA	NA	98815150	98814974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98815000_98815200
ES.23774.1	chr4	-	8017	4	ISM	ENSMUSG00000028556.16	ENSMUST00000206128.2	1507	8	7713	-7205	476	7022	3prime_fragment	FALSE	canonical	3	134	junction_3	13.1993265821489	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGCCTCTTTCCTTCTT	NA	False	NA	NA	False	ATTAAA	-1	NA	98832966	98817885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876
ES.23774.10	chr4	-	6957	49	FSM	ENSMUSG00000028556.16	ENSMUST00000030286.14	7127	49	-14	184	-14	0	multi-exon	FALSE	canonical	3	14	junction_27	28.048685042955	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009166	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.11	chr4	-	6800	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.7639284099727	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009105	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829136_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.13	chr4	-	6801	48	NIC	ENSMUSG00000028556.16	novel	6796	50	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	24.032703687619	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009109	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.14	chr4	-	6844	49	NNC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	35.7431459532998	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009089	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880656_98889269_98889440_98891988_98892154_98896168_98896401_98896952_98897047_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.15	chr4	-	6591	46	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	25.3540461134113	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009079	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.16	chr4	-	6621	47	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	25.1866379193143	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99009079	98825091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.19	chr4	-	6710	47	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_32	25.0776487894913	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99009082	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.2	chr4	-	8162	49	FSM	ENSMUSG00000028556.16	ENSMUST00000030286.14	7127	49	14	-1049	14	1049	multi-exon	FALSE	canonical	3	14	junction_27	28.048685042955	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCTCTTGTACATACAC	NA	False	NA	NA	False	ATTAAA	-17	NA	99009138	98823858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.20	chr4	-	7466	45	NNC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	-12631	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	30.1585685369572	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	98967979	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98888095_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956
ES.23774.21	chr4	-	9391	49	NNC	ENSMUSG00000028556.16	novel	6704	49	NA	NA	450	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	35.2920294648806	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99008549	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835008_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_98982266_98982373_99005931
ES.23774.22	chr4	-	6788	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	24.9311773376323	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99009104	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859110_98861359_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.23	chr4	-	6913	49	NNC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_48	30.5872783559149	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99009108	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_98982266_98982373_99008961
ES.23774.24	chr4	-	6932	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	24.8414620039813	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99008756	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008484
ES.23774.26	chr4	-	6927	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	31.1883978613666	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99009105	98825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98966238_98966429_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.27	chr4	-	6805	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.4840835763566	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009100	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835008_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.28	chr4	-	5517	38	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	52	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_36	27.4831510905161	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009100	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98977752_98977859_99008961
ES.23774.3	chr4	-	7214	47	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	72	339	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	24.4577970681971	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAAAGTGAATGCTTT	NA	False	NA	NA	False	AATGAA	-22	NA	99009080	98824568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.31	chr4	-	6818	48	NIC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	29.6056777004855	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009120	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.32	chr4	-	6798	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	24.9892869757857	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009108	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98904995_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.34	chr4	-	6719	47	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	31.0369010204424	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009107	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903927_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.35	chr4	-	6874	49	NNC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.2093266267174	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009079	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835008_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.36	chr4	-	6794	25	NIC	ENSMUSG00000028556.16	novel	6704	49	NA	NA	908	-1	intron_retention	FALSE	canonical	0	0	junction_19	38.7833861552426	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	98882287	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605
ES.23774.37	chr4	-	6776	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.0105817351868	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	99009080	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830928_98832872_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.38	chr4	-	6092	27	ISM	ENSMUSG00000028556.16	ENSMUST00000030286.14	7127	49	125108	187	-849	-1	3prime_fragment	FALSE	canonical	3	18	junction_26	27.9869210789485	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAATGAGTGGGATT	NA	False	NA	-7	True	ATTAAA	-18	NA	98884044	98825094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883
ES.23774.4	chr4	-	6996	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-107	-592	46	5	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTAATGCCAGTGACAT	NA	False	NA	NA	False	AATAAA	-27	NA	99009106	98824902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.43	chr4	-	6935	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	25.0164454736803	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTTTAATGAGTGGGA	NA	False	NA	-9	True	ATTAAA	-16	NA	99009131	98825096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873175_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.44	chr4	-	195	1	Intergenic	novelGene_19497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGGAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	98826788	98826593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98826600_98826800
ES.23774.45	chr4	-	7040	47	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-79	2929	74	-2929	5prime_fragment	FALSE	canonical	3	95	junction_6	15.9650492555322	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGAGAAGCCATTGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	99009078	98828423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.46	chr4	-	852	2	NNC	ENSMUSG00000028556.16	novel	371	2	NA	NA	-902	-1313	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGGAAAAGA	NA	False	NA	NA	False	AATACA	-19	NA	98849453	98848537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98848957_98849020
ES.23774.47	chr4	-	3168	22	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-166	63539	-13	392	5prime_fragment	FALSE	canonical	3	115	junction_2	12.392668449229	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTGTTCATGATAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	99009165	98889033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.48	chr4	-	2584	20	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-109	70630	44	53	5prime_fragment	FALSE	canonical	3	116	junction_1	11.3934908763307	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCATTTCTAACTTA	NA	False	NA	NA	False	NA	NA	NA	99009108	98896124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.49	chr4	-	2283	18	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-95	78361	58	-7678	5prime_fragment	FALSE	canonical	3	117	junction_9	10.0827029934427	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGCTGTTTCATCT	NA	False	NA	NA	False	ATTAAA	-14	NA	99009094	98903855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.5	chr4	-	6998	48	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	42	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.4840835763566	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACCAGAATCTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	99009110	98824911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835008_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.50	chr4	-	178	1	Intergenic	novelGene_19501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGTAGTAGTAG	NA	False	NA	NA	False	NA	NA	NA	98914062	98913884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_98913900_98914100
ES.23774.51	chr4	-	5014	1	Antisense	novelGene_ENSMUSG00000028553.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATTATAATTGCTAACA	NA	False	NA	NA	False	NA	NA	NA	98928470	98923456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_98923500_98928500
ES.23774.52	chr4	-	5017	13	NIC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	21	11701	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	39.5642936665541	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGCATGTGGCTGAT	NA	False	NA	NA	False	CATAAA	-16	NA	99009131	98940288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.53	chr4	-	4000	11	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-115	124089	38	2406	5prime_fragment	FALSE	canonical	3	117	junction_2	9.80051019080129	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTTTTATCTCCTCTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	99009114	98949583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.54	chr4	-	1324	10	ISM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-132	128044	21	-1549	5prime_fragment	FALSE	canonical	3	117	junction_1	10.3171916936948	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCAATGCTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	99009131	98953538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.55	chr4	-	208	1	Antisense	novelGene_ENSMUSG00000087395.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	99006049	99005841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_99005800_99006000
ES.23774.6	chr4	-	4696	29	NNC	ENSMUSG00000028556.16	novel	6297	48	NA	NA	2735	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	29.9297434138071	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATACCAGAATCTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	98893982	98824912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892145_98893725
ES.23774.7	chr4	-	6930	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	-224	-409	-71	5	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGATTTTAATTTCT	NA	False	NA	2	True	ATTAAA	-27	NA	99009223	98825085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23774.8	chr4	-	6941	49	NNC	ENSMUSG00000028556.16	novel	7127	49	NA	NA	42	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.5779329360061	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGGATTTTAATTTCT	NA	False	NA	2	True	ATTAAA	-27	NA	99009110	98825085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98839584_98839709_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ES.23775.1	chr4	-	176	1	Intergenic	novelGene_19502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTGCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	99013676	99013500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99013500_99013700
ES.23776.1	chr4	+	196	1	Intergenic	novelGene_19503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATATGAGTACATTGT	NA	False	NA	NA	False	NA	NA	NA	99056268	99056464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99056300_99056500
ES.23777.1	chr4	+	204	1	Intergenic	novelGene_19504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTTTACACTAATTT	NA	False	NA	NA	False	NA	NA	NA	99075552	99075756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99075600_99075800
ES.23778.1	chr4	+	3140	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	20	18	20	-14	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATGAAAACATAAGA	NA	False	NA	-5	True	NA	NA	NA	99082190	99148006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ES.23778.2	chr4	+	4522	10	NNC	ENSMUSG00000028550.16	novel	2792	11	NA	NA	22	11194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	23.8488035779316	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCGTTGATTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	99082405	99121126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99118160_99118225
ES.23778.3	chr4	+	5630	4	ISM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	31241	-799	7297	795	3prime_fragment	FALSE	canonical	3	66	junction_3	3.2659863237109	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGATGTGCATCTGAAATG	NA	False	NA	NA	False	AATAAA	-26	NA	99113624	99148819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_99116872_99117724_99117802_99123303_99123424_99146633
ES.23778.4	chr4	+	5475	2	ISM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	36952	0	13008	0	3prime_fragment	FALSE	canonical	3	66	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACACTTTTGTTTTGG	NA	False	NA	9	True	NA	NA	NA	99119335	99148020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_99123424_99146633
ES.23779.1	chr4	-	5435	1	Intergenic	novelGene_19505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTACATTTCTTTGAAA	5918	False	NA	NA	False	NA	NA	NA	99097896	99092461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99092500_99097900
ES.2378.1	chr10	-	2011	1	Genic_Genomic	ENSMUSG00000112478.2	novel	NA	NA	NA	NA	-1165	-3547	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAGAGAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	17200141	17198130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_17198100_17200100
ES.23780.1	chr4	-	156	1	Intergenic	novelGene_19506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99426568	99426412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99426400_99426600
ES.23781.1	chr4	-	3657	3	Intergenic	novelGene_19507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAATCATAACTACA	NA	False	NA	NA	False	AATAAA	-18	NA	99457623	99445803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99449178_99455728_99455942_99457553
ES.23782.1	chr4	+	1105	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-40	-711	-40	711	multi-exon	TRUE	canonical	3	84	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGATAGCTGGTCTCTT	NA	False	NA	1	True	AATAAA	-22	NA	99457696	99461959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.10	chr4	+	3600	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	53	-3299	53	3299	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTCTGTGTCTGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	99457789	99464547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.2	chr4	+	2821	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-21	-2446	-21	2446	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGAACTGTTGACT	NA	False	NA	NA	False	ATTAAA	-22	NA	99457715	99463694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.3	chr4	+	1828	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-20	-1454	-20	1454	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGTTTGGCTGATGA	NA	False	NA	NA	False	AATACA	-16	NA	99457716	99462702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.4	chr4	+	1463	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-19	-1090	-19	1090	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCTCAGCTGGCCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	99457717	99462338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.5	chr4	+	1815	3	NNC	ENSMUSG00000087332.2	novel	354	2	NA	NA	-18	1288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATTCCATCAATCGT	NA	False	NA	NA	False	AATAAA	-14	NA	99457718	99462536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99457876_99460038_99460194_99461033
ES.23782.6	chr4	+	1992	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-5	-1633	-5	1633	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGCGAATGGATTAAGAA	NA	False	NA	7	True	AATAAA	-18	NA	99457731	99462881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.7	chr4	+	3053	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	-5	-2694	-5	2694	multi-exon	FALSE	canonical	3	84	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCTTTTTGCTATT	NA	False	NA	16	True	ATTAAA	-27	NA	99457731	99463942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99457876_99461033
ES.23782.8	chr4	+	635	4	NNC	ENSMUSG00000087332.2	novel	354	2	NA	NA	-3	21596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.16024689946929	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	99457733	99482844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99457876_99470378_99470440_99480607_99480741_99482545
ES.23782.9	chr4	+	5927	1	Genic_Genomic	ENSMUSG00000087332.2	novel	NA	NA	NA	NA	31	2446	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGAACTGTTGACT	NA	False	NA	NA	False	ATTAAA	-22	NA	99457767	99463694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_99457800_99463700
ES.23783.1	chr4	+	176	1	Intergenic	novelGene_19511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGCAAATAGATA	NA	False	NA	NA	False	NA	NA	NA	99491987	99492163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99492000_99492200
ES.23784.1	chr4	+	171	1	Intergenic	novelGene_19512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	99516875	99517046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99516900_99517000
ES.23785.1	chr4	-	4126	4	Intergenic	novelGene_19508	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCCCAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	99500564	99472583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99476162_99476855_99476946_99483561_99483955_99500499
ES.23785.2	chr4	-	4079	5	Intergenic	novelGene_19509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCATTTGCCCAGAGTG	NA	False	NA	NA	False	NA	NA	NA	99520214	99472586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99476162_99476799_99476946_99491840_99491918_99494833_99494997_99520096
ES.23785.3	chr4	-	4120	6	Intergenic	novelGene_19510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.489897948556636	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATTTGCCCAGAGT	NA	False	NA	NA	False	NA	NA	NA	99520203	99472587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99476162_99476799_99476946_99491840_99491918_99493979_99494033_99494833_99494997_99520096
ES.23786.1	chr4	+	177	1	Intergenic	novelGene_19513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99520778	99520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99520800_99521000
ES.23787.1	chr4	+	152	1	Intergenic	novelGene_19514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99529105	99529257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99529100_99529300
ES.23788.1	chr4	+	190	1	Intergenic	novelGene_19515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAAGGGTGTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	99537445	99537635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99537400_99537600
ES.23789.1	chr4	+	2761	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-385	-52	-385	52	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGTTTTAATTAGGTG	NA	False	NA	7	True	AATAAA	-17	NA	99544150	99546911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99544200_99546900
ES.23789.2	chr4	+	1276	2	Genic_Genomic	ENSMUSG00000067261.5	novel	2324	1	NA	NA	-160	49	multi-exon	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTAGTGTTTTAATTAG	NA	False	NA	4	True	AATAAA	-14	NA	99544375	99546908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_99544981_99546237
ES.23789.3	chr4	+	2328	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	-127	123	-127	-123	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATGTATAAAGACG	NA	False	NA	NA	False	NA	NA	NA	99544408	99546736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99544400_99546700
ES.2379.1	chr10	+	2181	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	-906	704	-906	-673	multi-exon	FALSE	canonical	3	306	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTATTCTTGTTTCGTT	NA	False	NA	39	True	TATAAA	-44	NA	17598059	17600718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599208_17599685
ES.2379.2	chr10	+	2287	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	-329	21	-329	10	multi-exon	FALSE	canonical	3	306	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTTTTCTAAAAGTC	NA	False	NA	NA	False	AATAAA	-13	NA	17598636	17601401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599208_17599685
ES.2379.3	chr10	+	1755	1	FSM	ENSMUSG00000039910.11	ENSMUST00000219558.2	2411	1	-11	667	4	-667	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGTTTCGTTTTTTGT	NA	False	NA	45	True	AAAAAG	-20	NA	17598969	17600724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599000_17600700
ES.2379.5	chr10	+	2065	2	FSM	ENSMUSG00000039910.11	ENSMUST00000218370.2	376	2	-16	-1673	-7	3	multi-exon	FALSE	canonical	2	7	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAAACTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-6	NA	17598973	17601394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599330_17599685
ES.2379.6	chr10	+	1023	3	NNC	ENSMUSG00000039910.11	novel	1979	2	NA	NA	-7	-699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTGCTG	NA	False	NA	13	True	AGTAAA	-25	NA	17598973	17600692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17599208_17599685_17599903_17600120
ES.2379.7	chr10	+	2421	1	FSM	ENSMUSG00000039910.11	ENSMUST00000219558.2	2411	1	-7	-3	-7	3	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAAACTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-6	NA	17598973	17601394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599000_17601400
ES.2379.8	chr10	+	2362	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	12	-395	-3	395	multi-exon	FALSE	canonical	3	306	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTGATGAATTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	17598977	17601817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599208_17599685
ES.2379.9	chr10	+	1382	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	12	585	-3	-554	multi-exon	FALSE	canonical	3	306	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTGCTCAACTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	17598977	17600837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17599208_17599685
ES.23790.1	chr4	-	3694	1	Genic_Genomic	ENSMUSG00000086096.2	novel	NA	NA	NA	NA	-2307	10	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGTGCGTAGCGTGAAA	NA	False	NA	0	True	AATAAA	-29	NA	99545527	99541833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_99541800_99545500
ES.23790.2	chr4	-	2864	3	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2311	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACGGTGCGTAGCGTGA	NA	False	NA	-2	True	AATAAA	-27	NA	99545531	99541835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99542477_99543072_99543220_99543455
ES.23790.3	chr4	-	2784	3	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2311	8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACGGTGCGTAGCGTGA	NA	False	NA	-2	True	AATAAA	-27	NA	99545531	99541835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99542477_99543152_99543220_99543455
ES.23790.4	chr4	-	3423	2	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2274	8	intron_retention	FALSE	canonical	3	10	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACGGTGCGTAGCGTGA	NA	False	NA	-2	True	AATAAA	-27	NA	99545494	99541835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99543220_99543455
ES.23790.5	chr4	-	3069	2	NNC	ENSMUSG00000086096.2	novel	701	2	NA	NA	-2294	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCATACCATTAATTAC	NA	False	NA	-16	True	AATAAA	-13	NA	99545514	99541849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99542477_99543072
ES.23790.6	chr4	-	2425	1	Antisense	novelGene_ENSMUSG00002076832.1_AS_novelGene_ENSMUSG00000067261.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATTTTGATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	99546343	99543918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_99543900_99546300
ES.23791.1	chr4	+	203	1	Intergenic	novelGene_19516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTTTCTCCGGGCCTT	NA	False	NA	NA	False	NA	NA	NA	99552340	99552543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99552300_99552500
ES.23792.1	chr4	-	1366	3	NNC	ENSMUSG00000086592.2	novel	1081	5	NA	NA	37809	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTCTGTCCTATGTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	99563400	99550778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99551570_99559911_99560326_99563239
ES.23792.2	chr4	-	607	2	NNC	ENSMUSG00000086592.2	novel	1081	5	NA	NA	37842	-9069	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACTGAAGCAGACGTT	NA	False	NA	NA	False	NA	NA	NA	99563367	99559846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99560326_99563239
ES.23793.1	chr4	+	164	1	Intergenic	novelGene_19517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	99565933	99566097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99565900_99566100
ES.23794.1	chr4	-	180	1	Intergenic	novelGene_19518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	99575655	99575475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99575500_99575700
ES.23795.1	chr4	+	3152	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	-73	0	-72	0	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603828	99651697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.10	chr4	+	3059	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-59	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.5753045782821	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603841	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632872_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.11	chr4	+	3042	14	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-49	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	74.2670696415046	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603851	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.12	chr4	+	6218	4	NNC	ENSMUSG00000073792.12	novel	378	4	NA	NA	-39	24	intron_retention	FALSE	non_canonical	0	0	junction_3	94.595043327979	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTCTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	99603861	99627734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99619391_99626092
ES.23795.13	chr4	+	4952	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-36	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	57.0281774016273	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603864	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99631703_99631746_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.14	chr4	+	1721	4	ISM	ENSMUSG00000073792.12	ENSMUST00000144805.8	3947	14	-17	22814	-16	24	intron_retention	FALSE	canonical	3	166	junction_1	24.8506650928211	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTCTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	99603884	99627734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360
ES.23795.15	chr4	+	3023	14	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	74.1739519503241	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603885	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641229_99641429_99650107
ES.23795.16	chr4	+	5188	5	NNC	ENSMUSG00000073792.12	novel	3947	14	NA	NA	-10	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.930340475819	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTACTCTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	99603890	99627733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99619391_99626092_99626451_99627450
ES.23795.17	chr4	+	2980	15	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.2805922322746	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603891	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99632097_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.18	chr4	+	3208	16	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.5160705418536	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603894	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99647402_99647528_99650107
ES.23795.19	chr4	+	3075	15	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.1047685355894	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603894	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626449_99627456_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.2	chr4	+	3576	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	-73	-424	-72	424	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGATTCAGTGTTTGTC	NA	False	NA	NA	False	AATAAA	-23	NA	99603828	99652121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.20	chr4	+	5099	14	FSM	ENSMUSG00000073792.12	ENSMUST00000144805.8	3947	14	-5	-1147	-4	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	57.1968468531337	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603896	99651695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99641123_99641229_99641429_99650107
ES.23795.21	chr4	+	2905	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	57.0281774016273	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603896	99651695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630666_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.22	chr4	+	2746	12	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	61.0470621869136	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603897	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.23	chr4	+	2864	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	71.2368331029148	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603905	99651697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607437_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630666_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.24	chr4	+	4904	13	NNC	ENSMUSG00000073792.12	novel	3947	14	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	77.3017176753244	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603908	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603940_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630666_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99641123_99641229_99641429_99650107
ES.23795.25	chr4	+	1770	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	7	1302	-4	-153	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCATTGTTATTTACA	NA	False	NA	NA	False	AAGAAA	-6	NA	99603908	99650395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.28	chr4	+	11701	15	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	71.0856410771327	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603910	99651695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99644335_99644380
ES.23795.29	chr4	+	2724	12	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	2	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	75.9955414090168	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603914	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99650107
ES.23795.3	chr4	+	3088	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-68	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	74.1739519503241	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603832	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641217_99641429_99650107
ES.23795.30	chr4	+	2614	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	13	452	2	-452	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTCTTAATTACTG	NA	False	NA	NA	False	NA	NA	NA	99603914	99651245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.31	chr4	+	4361	14	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	4	-4	intron_retention	FALSE	canonical	2	10	junction_2	53.5307244630452	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603916	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607437_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.32	chr4	+	2539	10	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	60.5042596194579	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCCTTGTTTGCGTGTA	NA	False	NA	12	True	ATTAAA	-12	NA	99603922	99651691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.33	chr4	+	2794	13	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	77.244740921308	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603922	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99630591_99630666_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.34	chr4	+	3682	13	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.8791070643882	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603934	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99604834_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.35	chr4	+	3312	15	NNC	ENSMUSG00000073792.12	novel	517	4	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.9962088004129	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99603957	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99604237_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.36	chr4	+	227	1	Intergenic	novelGene_19519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCTTTTTTAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	99605364	99605591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_99605400_99605600
ES.23795.37	chr4	+	2307	8	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	7741	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	89.370359876694	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99615129	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99615185_99626360_99626451_99632726_99632863_99634562_99634649_99636922_99637008_99641053_99641123_99641229_99641429_99650107
ES.23795.38	chr4	+	6844	7	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	20727	-3	intron_retention	FALSE	canonical	3	163	junction_1	20.3114636487762	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99628115	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.39	chr4	+	8496	6	NIC	ENSMUSG00000073792.12	novel	3947	14	NA	NA	22311	-4	intron_retention	FALSE	canonical	3	158	junction_1	22.3284571791246	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99629699	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99629854_99630591_99632863_99634562_99634649_99636922_99641123_99641229_99641429_99650107
ES.23795.4	chr4	+	3832	12	NNC	ENSMUSG00000073792.12	novel	3947	14	NA	NA	-66	-110	intron_retention	FALSE	non_canonical	0	0	junction_7	61.846517570007	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTCTTCTTAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	99603834	99650438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630664_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99641429_99650107
ES.23795.40	chr4	+	6433	7	NNC	ENSMUSG00000073792.12	novel	3947	14	NA	NA	22313	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	71.6094733025364	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTGTTTGCGTGTATT	NA	False	NA	14	True	ATTAAA	-14	NA	99629701	99651693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99629854_99630591_99630666_99632726_99632863_99634562_99634649_99636922_99641123_99641229_99641429_99650107
ES.23795.41	chr4	+	10276	1	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	34031	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99641419	99651695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99641400_99651700
ES.23795.42	chr4	+	9895	2	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	34369	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99641757	99651697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99644291_99644335
ES.23795.6	chr4	+	2892	13	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-66	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	56.4121736270934	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTTTGCGTGTATTT	NA	False	NA	15	True	ATTAAA	-15	NA	99603834	99651694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ES.23795.7	chr4	+	770	5	ISM	ENSMUSG00000073792.12	ENSMUST00000144805.8	3947	14	-66	22814	-65	24	5prime_fragment	FALSE	canonical	3	166	junction_1	24.1557446583623	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTCTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	99603835	99627734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450
ES.23795.9	chr4	+	3200	16	NNC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	-59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.7695936823905	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTTGCGTGTATTTC	NA	False	NA	16	True	ATTAAA	-16	NA	99603841	99651695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99647402_99647466_99650107
ES.23796.1	chr4	-	5436	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	60	-2690	8	2690	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGCACACTTTGTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	99717363	99650948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ES.23796.10	chr4	-	627	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	3	-59	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTGTATATGCCT	NA	False	NA	-1	True	AATAAA	-30	NA	99717368	99655626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
ES.23796.11	chr4	-	731	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-24	-75	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	82.4376078235745	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717395	99655642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99717319
ES.23796.12	chr4	-	492	6	NIC	ENSMUSG00000028549.18	novel	716	8	NA	NA	-24	-75	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	88.4185500898991	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717395	99655642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99702294_99702338_99717319
ES.23796.13	chr4	-	894	10	NNC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-15	-75	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	88.8231701503361	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717386	99655642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99655814_99657730_99657779_99658249_99658379_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ES.23796.14	chr4	-	5392	1	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	47342	-4359	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	99669985	99664593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99664600_99670000
ES.23796.15	chr4	-	280	1	Intergenic	novelGene_19520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	99670707	99670427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99670400_99670700
ES.23796.2	chr4	-	4299	10	NNC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-247	1638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.7570841734892	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGTAGCCAGGATGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	99717670	99652000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99652171_99652562_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ES.23796.3	chr4	-	2677	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	7	66	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGTTTCAAATGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	99717364	99653572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
ES.23796.4	chr4	-	2732	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	52	22	0	-22	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGATTGTTCTAACAT	NA	False	NA	NA	False	AATATA	-17	NA	99717371	99653660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ES.23796.5	chr4	-	2548	7	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	0	-55	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	78.2206636524021	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTCTTCAAATATAATG	NA	False	NA	NA	False	TATAAA	-13	NA	99717423	99653693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99702294_99702338_99717319
ES.23796.6	chr4	-	2144	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-185	-304	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	82.4376078235745	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCTTTCCCATGTACA	NA	False	NA	NA	False	AATAAA	-15	NA	99717608	99654442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99717319
ES.23796.7	chr4	-	866	10	NNC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-16	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.4642347990507	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTGTATATGCCTG	NA	False	NA	0	True	AATAAA	-31	NA	99717387	99655625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99716567_99716651_99717319
ES.23796.8	chr4	-	1003	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	-185	1988	-185	-59	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTGTATATGCCT	NA	False	NA	-1	True	AATAAA	-30	NA	99717608	99655626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ES.23796.9	chr4	-	1826	8	NNC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	-13	-59	intron_retention	FALSE	non_canonical	0	0	junction_5	83.447160355692	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTGTATATGCCT	NA	False	NA	-1	True	AATAAA	-30	NA	99717384	99655626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_99655814_99657730_99657779_99668998_99670208_99677837_99677917_99686932_99687000_99690341_99690470_99702294_99702338_99717319
ES.23797.1	chr4	+	1913	12	NNC	ENSMUSG00000073791.14	novel	2121	14	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	8.76412673090548	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	2022	False	NA	NA	False	AATACA	-12	NA	99717683	99769978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99717792_99719629_99719818_99731496_99731709_99732650_99732736_99735289_99735486_99735908_99736028_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ES.23797.2	chr4	+	1896	12	NIC	ENSMUSG00000073791.14	novel	2121	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	7.56569028056843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	2025	False	NA	NA	False	AATACA	-12	NA	99717686	99769978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ES.23797.3	chr4	+	2138	14	NIC	ENSMUSG00000073791.14	novel	2121	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.32268387324139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	2032	False	NA	NA	False	AATACA	-12	NA	99717693	99769978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99717773_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ES.23797.4	chr4	+	2134	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	-20	7	17	0	multi-exon	FALSE	canonical	3	6	junction_1	5.10481846862679	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	2055	False	NA	NA	False	AATACA	-12	NA	99717716	99769978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ES.23798.1	chr4	-	180	1	Intergenic	novelGene_19521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGATAATCATTAAC	NA	False	NA	NA	False	NA	NA	NA	99742470	99742290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_99742300_99742500
ES.23799.1	chr4	+	2400	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	-29	0	-29	0	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99786581	99844491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ES.23799.10	chr4	+	2014	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	67	290	67	-290	multi-exon	FALSE	canonical	3	174	junction_5	14.102836594104	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTTGTCTCCCTACA	NA	False	NA	NA	False	ATTAAA	-12	NA	99786677	99844201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ES.23799.11	chr4	+	2071	12	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	89	-288	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	76.9054372654608	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTGTCTCCCTACATC	NA	False	NA	NA	False	ATTAAA	-14	NA	99786699	99844203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99842941_99843019_99843871
ES.23799.12	chr4	+	2013	11	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	561	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.9264886781093	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99787171	99844491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787212_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ES.23799.2	chr4	+	2897	1	NIC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	15	-54969	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCTCGAATTTGTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	99786625	99789522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_99786600_99789500
ES.23799.3	chr4	+	5190	11	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	37	0	intron_retention	FALSE	canonical	0	0	junction_3	91.3961158912128	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99786647	99844491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787009_99818652_99818816_99819240_99819324_99820714_99820841_99821871_99822063_99824255_99827300_99829614_99829762_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ES.23799.5	chr4	+	2159	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	56	156	56	-156	multi-exon	FALSE	canonical	3	174	junction_5	14.102836594104	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTCCCCATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	99786666	99844335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ES.23799.6	chr4	+	1469	6	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	82.8526402717499	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTTGTCGCTTTTATT	NA	False	NA	15	True	ATTAAA	-18	NA	99786674	99844490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99821952_99843871
ES.23799.8	chr4	+	2390	12	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	64	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	76.7153157421742	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTTGCCTGTTGTCGCT	NA	False	NA	9	True	ATTAAA	-12	NA	99786674	99844484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99842941_99843032_99843871
ES.23799.9	chr4	+	2016	2	NNC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	64	-54968	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTCGAATTTGTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	99786674	99789523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_99787009_99787841
ES.238.1	chr1	-	1751	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	-47	1	-47	-1	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCTCTCATTTTATTT	7157	False	NA	0	True	AATAAA	-22	NA	34478800	34475751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ES.2380.1	chr10	-	1385	2	Antisense	novelGene_ENSMUSG00000039910.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCCGGGCTTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	17600836	17598973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_17599206_17599683
ES.23800.1	chr4	-	319	1	Intergenic	novelGene_19522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGATTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	100630597	100630278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100630300_100630600
ES.23800.2	chr4	-	180	1	Intergenic	novelGene_19523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100630597	100630417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100630400_100630600
ES.23801.1	chr4	+	5273	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-263	755	-263	558	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGAATGGAATTGGGG	NA	False	NA	-1	True	NA	NA	NA	100633608	100860986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.10	chr4	+	2274	7	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-2	50524	-2	-49041	5prime_fragment	FALSE	canonical	3	174	junction_5	19.0036546192802	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTCAAGCCATTCTG	NA	False	NA	NA	False	AATAAA	-8	NA	100633869	100811217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230
ES.23801.11	chr4	+	5618	26	NIC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	44.7412829498663	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100633869	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100634566_100722178_100722242_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.12	chr4	+	5732	27	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	43.7551687563813	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGAGGGGCTGCTGGTATC	NA	False	NA	15	True	AATAAA	-17	NA	100633870	100861738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824173_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.13	chr4	+	5919	28	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	57.7273284021047	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100633870	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100824412_100824566_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.15	chr4	+	4758	27	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-1	336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	44.3318577263288	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGAACTTTCAAACTT	NA	False	NA	7	True	AGTAAA	-18	NA	100633870	100860764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831233_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.16	chr4	+	5695	28	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.8856851463911	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGGGGCTGCTGGTATCT	NA	False	NA	16	True	AATAAA	-18	NA	100633870	100861739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634016_100634084_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.17	chr4	+	5726	27	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.5688915576162	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCGAGGGGCTGCTGGTA	NA	False	NA	13	True	AATAAA	-15	NA	100633872	100861736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816679_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.18	chr4	+	5526	27	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.0992768353736	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100633872	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816676_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058_100861248_100861306
ES.23801.19	chr4	+	5094	26	NIC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	1	335	intron_retention	FALSE	canonical	3	174	junction_5	18.5011999610836	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTGAACTTTCAAACT	NA	False	NA	6	True	AGTAAA	-17	NA	100633872	100860763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.2	chr4	+	5991	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-210	-16	-210	16	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGTGCTGTTTCTTACC	NA	False	NA	34	True	AATAAA	-36	NA	100633661	100861757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.20	chr4	+	3326	7	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	1	49469	1	-47986	5prime_fragment	FALSE	canonical	3	174	junction_5	19.0036546192802	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCTTGTAACATTCATT	NA	False	NA	NA	False	NA	NA	NA	100633872	100812272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230
ES.23801.29	chr4	+	3980	1	Intergenic	novelGene_19524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTGTCTTCTCATT	NA	False	NA	NA	False	ATTAAA	-11	NA	100635999	100639979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_100636000_100640000
ES.23801.3	chr4	+	4998	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-210	977	-210	336	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGAACTTTCAAACTT	NA	False	NA	7	True	AGTAAA	-18	NA	100633661	100860764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.30	chr4	+	179	1	Intergenic	novelGene_19525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAATT	NA	False	NA	NA	False	NA	NA	NA	100657457	100657636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_100657500_100657600
ES.23801.31	chr4	+	168	1	Intergenic	novelGene_19531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATGCTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	100718979	100719147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_100719000_100719100
ES.23801.32	chr4	+	4753	23	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	172397	0	-45539	0	3prime_fragment	FALSE	canonical	3	174	junction_1	18.9224712274949	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100806268	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.33	chr4	+	3880	18	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	189509	0	-28427	0	3prime_fragment	FALSE	canonical	3	191	junction_11	17.5524917147943	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	3934	False	NA	18	True	AATAAA	-20	NA	100823380	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.34	chr4	+	3731	17	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	190269	0	-27667	0	3prime_fragment	FALSE	canonical	3	191	junction_10	18.0830333116433	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	4694	False	NA	18	True	AATAAA	-20	NA	100824140	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.35	chr4	+	4262	16	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	191380	-655	-26556	655	3prime_fragment	FALSE	canonical	3	191	junction_9	18.540046745716	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTGAAGTAGGTAAA	5805	False	NA	NA	False	AAAAAG	-4	NA	100825251	100862396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.36	chr4	+	3008	12	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	199670	-14	-18266	14	3prime_fragment	FALSE	canonical	3	191	junction_5	20.6197369944189	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGACGTGCTGTTTCTTA	NA	False	NA	32	True	AATAAA	-34	NA	100833541	100861755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.37	chr4	+	2884	11	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	204294	0	-13642	0	3prime_fragment	FALSE	canonical	3	191	junction_4	17.8280677584532	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100838165	100861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.38	chr4	+	1937	4	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-1821	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.080921198855	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCGAGGGGCTGCTGGT	NA	False	NA	12	True	AATAAA	-14	NA	100849986	100861735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100850088_100851231_100851289_100851931_100852034_100860058
ES.23801.39	chr4	+	4772	1	NIC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	4084	334	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTGAACTTTCAAAC	NA	False	NA	5	True	AGTAAA	-16	NA	100855990	100860762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100856000_100860800
ES.23801.5	chr4	+	5717	28	NNC	ENSMUSG00000028532.15	novel	5765	27	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	43.8856851463911	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGGGGCTGCTGGTATCT	NA	False	NA	16	True	AATAAA	-18	NA	100633858	100861739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058_100861248_100861306
ES.23801.6	chr4	+	4055	25	ISM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-5	10362	-5	-8879	5prime_fragment	FALSE	canonical	3	174	junction_5	17.9953215370613	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTGGCTTGTATTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	100633866	100851379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231
ES.23801.8	chr4	+	5562	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-3	206	-3	-206	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTAAATCTCCATTTA	NA	False	NA	NA	False	NA	NA	NA	100633868	100861535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23801.9	chr4	+	5672	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	-3	96	-3	-96	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAAGTAAACTATATA	NA	False	NA	-78	True	AATAAA	-18	NA	100633868	100861645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ES.23802.1	chr4	-	179	1	Intergenic	novelGene_19526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	100659941	100659762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100659800_100659900
ES.23803.1	chr4	-	3250	1	Intergenic	novelGene_19527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCCACTATCAGCCAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	100672051	100668801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100668800_100672100
ES.23804.1	chr4	-	7660	2	Antisense	novelGene_ENSMUSG00000028532.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGAGCGAAAACTCT	NA	False	NA	NA	False	AAGAAA	-8	NA	100683646	100675940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_100676665_100676710
ES.23804.2	chr4	-	170	1	Intergenic	novelGene_19528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100682471	100682301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100682300_100682500
ES.23805.1	chr4	-	1854	1	Intergenic	novelGene_19529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTCTTTGTCCCGTCTC	NA	False	NA	NA	False	NA	NA	NA	100687353	100685499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100685500_100687400
ES.23806.1	chr4	-	172	1	Intergenic	novelGene_19530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	100717432	100717260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100717300_100717400
ES.23807.1	chr4	-	4487	1	Antisense	novelGene_ENSMUSG00000028532.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGGCAACATACCAAAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	100812824	100808337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_100808300_100812800
ES.23807.2	chr4	-	1829	1	Intergenic	novelGene_19532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACAGATTTTCAAGGATA	NA	False	NA	NA	False	ATTAAA	-13	NA	100812824	100810995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100811000_100812800
ES.23808.1	chr4	-	178	1	Intergenic	novelGene_19533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACCACTC	NA	False	NA	NA	False	NA	NA	NA	100910362	100910184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_100910200_100910400
ES.23809.1	chr4	+	3584	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	-29	490	-29	-490	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTACATATGTTAC	NA	False	NA	NA	False	TATAAA	-5	NA	100926150	101009077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.2	chr4	+	4289	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	-28	-216	-28	216	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTTGGTCATGAGTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	100926151	101009783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.3	chr4	+	4071	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	-26	0	-26	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTAGTATGTTTATTGT	NA	False	NA	8	True	ATTAAA	-18	NA	100926153	101009567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.4	chr4	+	3976	11	NIC	ENSMUSG00000035275.15	novel	4045	12	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	12.2212928939618	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTTAGTATGTTTA	NA	False	NA	4	True	ATTAAA	-14	NA	100926177	101009563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100926527_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.5	chr4	+	6071	11	NIC	ENSMUSG00000035275.15	novel	4045	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	27	junction_5	7.76466354712166	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTTAGTATGTTTAT	NA	False	NA	5	True	ATTAAA	-15	NA	100926180	101009564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.6	chr4	+	2957	8	FSM	ENSMUSG00000035275.15	ENSMUST00000106955.2	2893	8	1	-65	1	65	multi-exon	FALSE	canonical	3	27	junction_5	8.41524370001322	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGTTTATTCCTGACT	NA	False	NA	NA	False	AATAAA	-20	NA	100926180	100992618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051
ES.23809.7	chr4	+	5263	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	36	-1254	36	1254	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGATTTGAGAGATTCT	NA	False	NA	NA	False	AATAAA	-21	NA	100926215	101010821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.8	chr4	+	4151	11	NIC	ENSMUSG00000035275.15	novel	4045	12	NA	NA	41	214	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	12.2212928939618	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTCTTGGTCATGAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100926220	101009781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_100926527_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ES.23809.9	chr4	+	5129	8	NNC	ENSMUSG00000035275.15	novel	4045	12	NA	NA	33416	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	11.6303613925986	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTAGTATGTTTATT	NA	False	NA	6	True	ATTAAA	-16	NA	100960091	101009565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_100960275_100964399_100964592_100977649_100977777_100988460_100988488_100991133_100993451_100994907_100995017_100996291_100996429_101007528
ES.2381.1	chr10	+	1790	3	FSM	ENSMUSG00000039891.7	ENSMUST00000175676.2	1786	3	-2	-2	-2	2	multi-exon	FALSE	canonical	3	8	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTGTTGGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	17671971	17683658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17672170_17674835_17675282_17682512
ES.2381.2	chr10	+	952	4	NNC	ENSMUSG00000039891.7	novel	4422	10	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.02768199119819	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCATGCCTGTTGGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	17671989	17683658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17672170_17674835_17675282_17682512_17682605_17683424
ES.2381.3	chr10	+	4376	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	44	2	44	-2	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTAGTAGGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	17672047	17721411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
ES.2381.4	chr10	+	2392	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	64	1966	64	-1966	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTACATTGGTGCCTTAA	NA	False	NA	NA	False	AATATA	-11	NA	17672067	17719447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
ES.2381.5	chr10	+	5318	9	NIC	ENSMUSG00000039891.7	novel	4422	10	NA	NA	64	-1962	intron_retention	FALSE	canonical	1	5	junction_4	2.44948974278318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGGTGCCTTAATCCA	NA	False	NA	NA	False	AATATA	-15	NA	17672067	17719451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17709101_17714655_17714749_17717173_17717270_17718445
ES.2381.6	chr10	+	2491	10	FSM	ENSMUSG00000039891.7	ENSMUST00000037964.7	4422	10	69	1862	69	-1862	multi-exon	FALSE	canonical	1	5	junction_4	2.43938871112224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACCCAATAAGATCTA	NA	False	NA	NA	False	AATAAA	-29	NA	17672072	17719551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17672170_17674835_17675282_17682512_17682605_17690976_17691148_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
ES.2381.7	chr10	+	3694	7	NNC	ENSMUSG00000039891.7	novel	4422	10	NA	NA	31297	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.02305952453618	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTAGTAGGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	17703300	17721411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17703450_17703539_17703735_17705983_17706104_17709025_17709101_17714655_17714749_17717173_17717270_17718445
ES.23810.1	chr4	+	1975	5	Antisense	novelGene_ENSMUSG00000028530.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101031121	101039977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_101031410_101032273_101032432_101034765_101034952_101036649_101036988_101038972
ES.23811.1	chr4	-	4934	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	-22	-6	-22	6	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCCTTTTAATATTAAGC	NA	False	NA	-1	True	AATAAA	-23	NA	101122501	101009557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.11	chr4	-	5715	24	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_11	42.218846524868	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGCCTTTTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	101122419	101009564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021650_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.12	chr4	-	9499	24	NIC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	155	junction_17	17.2657423852385	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGCCTTTTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	101122488	101009564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.15	chr4	-	5273	28	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	72.6270326466409	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGCCTTTTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	101122465	101009564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039135_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101056065_101056112_101056625_101056763_101122238
ES.23811.16	chr4	-	5053	26	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	60.6372031017263	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGCCTTTTAAT	NA	False	NA	-8	True	AATAAA	-16	NA	101122423	101009564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021655_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101122238
ES.23811.19	chr4	-	5304	28	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.548493786	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCATATGCCTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	101122451	101009565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021650_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101056029_101056112_101056625_101056763_101122238
ES.23811.22	chr4	-	4894	25	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	41.4274591907348	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGCATATGCCTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	101122464	101009566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021648_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.24	chr4	-	5051	27	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-14116	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	59.918497405734	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGCATATGCCTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	101056763	101009566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101056065_101056112_101056625
ES.23811.29	chr4	-	5197	27	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	61.0367529206837	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGCATATGCCTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	101122461	101009566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101114689_101114750_101115068_101115321_101122238
ES.23811.3	chr4	-	5094	25	Fusion	ENSMUSG00000028530.15_ENSMUSG00000086782.3	novel	4906	25	NA	NA	228	2	multi-exon	FALSE	canonical	0	0	junction_24	40.0124112689495	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGCCTTTTAATATT	NA	False	NA	-5	True	AATAAA	-19	NA	101213704	101009561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101213277
ES.23811.30	chr4	-	5926	25	NIC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	3	junction_24	51.4348124382267	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGCATATGCCTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	101122433	101009566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101122238
ES.23811.31	chr4	-	5240	27	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	59.918497405734	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATGCATATGCCTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	101122470	101009567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101076497_101076640_101122238
ES.23811.32	chr4	-	4247	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	-3	662	-3	-662	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTCCTGCTACCTTT	NA	False	NA	NA	False	NA	NA	NA	101122482	101010225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.33	chr4	-	4327	26	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	0	-662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	52.3340653876612	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTTCCTGCTACCTTT	NA	False	NA	NA	False	NA	NA	NA	101122420	101010225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101076497_101076640_101122238
ES.23811.36	chr4	-	4186	28	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	0	833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	66.5144558686769	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTCTGCCTCTAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	101122420	101010612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101054972_101055178_101056065_101056112_101056625_101056763_101122238
ES.23811.37	chr4	-	3857	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	0	1049	0	833	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTCTGCCTCTAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	101122479	101010612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.38	chr4	-	3516	23	NIC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-1	830	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	41.5316517751649	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTATTCTGCCTCT	NA	False	NA	NA	False	TTTAAA	-17	NA	101122421	101010615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101122238
ES.23811.4	chr4	-	4894	25	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	54.8433216586628	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	-7	True	AATAAA	-17	NA	101122475	101009563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028433_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039135_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ES.23811.42	chr4	-	1092	1	Intergenic	novelGene_19534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGACTCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	101201026	101199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101199900_101201000
ES.23811.43	chr4	-	2211	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-2200	72	2200	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGTGTATCTGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	101204152	101201941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101201900_101204200
ES.23811.44	chr4	-	430	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-419	72	419	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATAGTGACATGGCTT	NA	False	NA	0	True	AATAAA	-18	NA	101204152	101203722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101203700_101204200
ES.23811.5	chr4	-	5013	26	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	52.3340653876612	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	-7	True	AATAAA	-17	NA	101122444	101009563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101076497_101076640_101122238
ES.23811.7	chr4	-	4735	25	NNC	ENSMUSG00000028530.15	novel	4906	25	NA	NA	390	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	53.3634680490523	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	-7	True	AATAAA	-17	NA	101122030	101009563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021650_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101121964
ES.23812.1	chr4	-	260	1	Intergenic	novelGene_19535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATATAGAGA	NA	False	NA	NA	False	NA	NA	NA	101218504	101218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101218200_101218500
ES.23813.1	chr4	+	166	1	Intergenic	novelGene_19536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATTTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	101229574	101229740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101229600_101229700
ES.23814.1	chr4	-	167	1	Intergenic	novelGene_19537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1901	False	NA	NA	False	NA	NA	NA	101251707	101251540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101251500_101251700
ES.23815.1	chr4	+	4300	6	NNC	ENSMUSG00000028527.19	novel	537	4	NA	NA	-19814	48	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	108.731596143899	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTAAAGCTTCACAGG	NA	False	NA	67	True	CATAAA	-28	NA	101256659	101324240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101256820_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.10	chr4	+	921	3	NNC	ENSMUSG00000028527.19	novel	4360	6	NA	NA	-2	-37953	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	4.5	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCACCTTTTCTTTCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	101276513	101279825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101276754_101276925_101277163_101279381
ES.23815.11	chr4	+	2973	2	ISM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	127	44435	97	-38021	5prime_fragment	FALSE	canonical	3	20	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTATTCTTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	101276612	101279757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101276754_101276925
ES.23815.12	chr4	+	4191	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	311	0	-76	0	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276826	101324192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.13	chr4	+	1654	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	396	2452	9	764	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGTCAGTGTTTTTCT	NA	False	NA	4	True	AAGAAA	-31	NA	101276911	101321740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.15	chr4	+	3964	4	NIC	ENSMUSG00000028527.19	novel	4186	6	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	134.910670033504	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTGATGGAATTTCA	NA	False	NA	16	True	AATAAA	-14	NA	101276930	101324189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101277163_101317696_101317870_101320145_101320265_101320749
ES.23815.16	chr4	+	4863	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	415	-776	1	776	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGACCTAAGTTTAATT	NA	False	NA	NA	False	AATAAA	-19	NA	101276930	101324968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.17	chr4	+	5179	19	Fusion	ENSMUSG00000028528.18_ENSMUSG00000028527.19	novel	4186	6	NA	NA	1	1	multi-exon	TRUE	canonical	0	0	junction_1	28.2410261066335	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATATACATTATT	NA	False	NA	8	True	ATTAAA	-16	NA	101276930	101499997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_101277163_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.18	chr4	+	4265	5	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	415	-178	1	178	3prime_fragment	FALSE	canonical	3	206	junction_2	35.8355619462009	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCCTCGGGTTCTGT	NA	False	NA	NA	False	AAAAAG	-45	NA	101276930	101324370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.19	chr4	+	4567	4	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	417	3	3	-3	intron_retention	FALSE	canonical	3	206	junction_2	33.5890193697616	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTGATGGAATTTCA	NA	False	NA	16	True	AATAAA	-14	NA	101276932	101324189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101277163_101304356_101304477_101317696_101317870_101320145
ES.23815.2	chr4	+	4147	6	NNC	ENSMUSG00000028527.19	novel	537	4	NA	NA	-642	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.8788423674	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTGATGGAATTTCA	NA	False	NA	16	True	AATAAA	-14	NA	101275831	101324189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101275890_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.20	chr4	+	5218	20	Fusion	ENSMUSG00000028528.18_ENSMUSG00000028527.19	novel	4186	6	NA	NA	20	-5	multi-exon	FALSE	canonical	0	0	junction_1	29.1909370066139	578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101276949	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_101277163_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.21	chr4	+	4601	6	NNC	ENSMUSG00000028527.19	novel	791	5	NA	NA	-354	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.865886023866	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101277339	101324192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101277945_101304356_101304477_101317181_101317326_101317696_101317870_101320145_101320265_101320752
ES.23815.22	chr4	+	4433	5	FSM	ENSMUSG00000028527.19	ENSMUST00000151561.2	791	5	-327	-3315	-327	0	multi-exon	FALSE	canonical	2	10	junction_1	115.655739157207	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101277366	101324192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101277945_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.23	chr4	+	4213	4	ISM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	27482	1	-422	-1	3prime_fragment	FALSE	canonical	3	206	junction_1	41.3037528561268	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGATGGAATTTCATA	NA	False	NA	18	True	AATAAA	-16	NA	101303997	101324191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.24	chr4	+	5468	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	-337	-4	-320	4	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATATACATTATTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	101353507	101500000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.26	chr4	+	5268	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	23.5903830583462	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353638	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.27	chr4	+	5365	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-156	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	35.9756766090538	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353671	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101361068_101361205_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.28	chr4	+	5760	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-148	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.4203681103912	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353679	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101361068_101361205_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.29	chr4	+	5122	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	31.9747682160346	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353780	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.3	chr4	+	4253	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	-51	-16	-51	16	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGCATTATTCTCTGT	NA	False	NA	35	True	AATAAA	-33	NA	101276422	101324208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.30	chr4	+	1397	4	NNC	ENSMUSG00000028528.18	novel	458	3	NA	NA	-6	-86240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.4142135623731	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTAATTTCTGCTTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	101353821	101370061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101361068_101361205_101364393_101365380_101369925
ES.23815.31	chr4	+	5278	21	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7981843114983	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353845	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101365227_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.32	chr4	+	4825	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	22	280	22	-263	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGAAGAACCCTTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101353866	101499716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.33	chr4	+	5054	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	30.3264644237413	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353867	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101353961_101389194_101389260_101454997_101455149_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.34	chr4	+	5126	21	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.7748555401649	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353889	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101389194_101389260_101415422_101415473_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.35	chr4	+	3368	2	ISM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	45	107505	45	-63810	5prime_fragment	FALSE	canonical	3	57	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGAAAGAGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	101353889	101392491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101353961_101389194
ES.23815.36	chr4	+	5134	21	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.04321800276	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTAGAAATATACATTA	NA	False	NA	6	True	ATTAAA	-14	NA	101353889	101499995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101389194_101389260_101441925_101441979_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.37	chr4	+	5030	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	63	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.2742706981331	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353907	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101354457_101354495_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.38	chr4	+	5045	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5672453830344	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101353908	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101441925_101441979_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.39	chr4	+	4464	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	64	599	64	-582	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAACAATCTAGGTGTT	NA	False	NA	NA	False	AATATA	-23	NA	101353908	101499397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.4	chr4	+	743	3	NNC	ENSMUSG00000028527.19	novel	4186	6	NA	NA	-44	-38029	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	10	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAATGTTTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	101276429	101279749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101276568_101276925_101277163_101279381
ES.23815.40	chr4	+	3518	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	66	-1461	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	23.5903830583462	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAACTCTTGAACGAT	NA	False	NA	NA	False	NA	NA	NA	101353910	101498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.41	chr4	+	5294	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	66	-233	66	233	multi-exon	FALSE	canonical	3	57	junction_1	19.3392228428705	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGCATCCCAAACCAA	NA	False	NA	NA	False	NA	NA	NA	101353910	101500229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.42	chr4	+	3298	20	NNC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	66	-3252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.0420578235507	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGACTAAGAAATTTAT	NA	False	NA	NA	False	GATAAA	-21	NA	101353910	101496727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101353961_101361068_101361205_101364973_101365380_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462
ES.23815.43	chr4	+	5546	21	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.6065567897337	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAGAAATATACATT	NA	False	NA	5	True	ATTAAA	-13	NA	101353962	101499994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101361068_101361205_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.44	chr4	+	5445	21	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	278	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.9271689957717	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101354122	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101354457_101354586_101361068_101361205_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.45	chr4	+	5246	20	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	278	-5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	28.8071243881173	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101354122	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.46	chr4	+	5056	20	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	278	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	28.6159012804801	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101354122	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354174_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.47	chr4	+	5186	19	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.2410261066335	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101354123	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.48	chr4	+	3275	19	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	279	-1704	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	28.2410261066335	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGAAGCCTTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	101354123	101498275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354174_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.49	chr4	+	4940	18	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	279	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.2179589793454	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101354123	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354174_101454997_101455149_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.5	chr4	+	4247	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106945.8	4175	6	-72	0	-30	0	multi-exon	FALSE	canonical	1	5	junction_1	107.967402487973	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276443	101324192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101276599_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.50	chr4	+	4994	19	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	279	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.2410261066335	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAGAAATATACATT	NA	False	NA	5	True	ATTAAA	-13	NA	101354123	101499994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354174_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.51	chr4	+	4564	20	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	279	-480	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	28.6159012804801	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	101354123	101499499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354174_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.52	chr4	+	5210	20	NNC	ENSMUSG00000028528.18	novel	1569	12	NA	NA	306	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5672453830344	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAGAAATATACATT	NA	False	NA	5	True	ATTAAA	-13	NA	101354150	101499994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101354364_101441925_101441979_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.53	chr4	+	5485	20	NIC	ENSMUSG00000028528.18	novel	5128	19	NA	NA	-163	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	27.8557821347373	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTAGAAATATACATTA	9033	False	NA	6	True	ATTAAA	-14	NA	101364904	101499995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.54	chr4	+	5306	19	NIC	ENSMUSG00000028528.18	novel	5128	19	NA	NA	-104	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	37.6043814757382	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTAGAAATATACATTA	9092	False	NA	6	True	ATTAAA	-14	NA	101364963	101499995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.55	chr4	+	5359	19	FSM	ENSMUSG00000028528.18	ENSMUST00000038207.12	5258	19	-103	2	-103	-1	multi-exon	FALSE	canonical	2	7	junction_1	26.7460046629791	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAGAAATATACATT	9093	False	NA	5	True	ATTAAA	-13	NA	101364964	101499994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101365380_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.56	chr4	+	6434	19	NIC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	-82	0	intron_retention	FALSE	canonical	3	7	junction_1	28.5696031162882	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	9114	False	NA	7	True	ATTAAA	-15	NA	101364985	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462
ES.23815.57	chr4	+	3501	2	ISM	ENSMUSG00000028528.18	ENSMUST00000149047.8	872	7	3	76057	3	-63810	5prime_fragment	FALSE	canonical	3	7	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGAGAAAGAGGTTTTG	9304	False	NA	NA	False	NA	NA	NA	101365175	101392491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101365380_101389194
ES.23815.58	chr4	+	5140	21	NNC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.3636313686311	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAGAAATATACATT	9430	False	NA	5	True	ATTAAA	-13	NA	101365301	101499994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101365380_101389194_101389260_101441925_101441979_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.59	chr4	+	1429	1	Intergenic	novelGene_19540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAAAAGGACTGCTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	101366371	101367800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101366400_101367800
ES.23815.60	chr4	+	4493	1	Intergenic	novelGene_19541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAGAAAAAACATTTC	NA	False	NA	NA	False	AAGAAA	-5	NA	101376361	101380854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101376400_101380900
ES.23815.61	chr4	+	5045	20	NNC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	-18483	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.2742706981331	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGATACAAAATACTT	NA	False	NA	-10	True	AAAACA	-37	NA	101389193	101499979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101389260_101415422_101415473_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.62	chr4	+	4535	2	Intergenic	novelGene_19542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGATGATAGATAGATCA	NA	False	NA	NA	False	NA	NA	NA	101392818	101397401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101397254_101397301
ES.23815.63	chr4	+	4613	17	NNC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	48541	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	29.1021235264714	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	9531	False	NA	7	True	ATTAAA	-15	NA	101456331	101499996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492273_101492364_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.64	chr4	+	6491	7	ISM	ENSMUSG00000028528.18	ENSMUST00000106933.2	5191	19	69806	-11	69806	-5	3prime_fragment	FALSE	canonical	3	96	junction_1	8.9333955221716	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTTTTAGAAATATA	NA	False	NA	1	True	ATTAAA	-9	NA	101477596	101499990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.65	chr4	+	5043	4	ISM	ENSMUSG00000028528.18	ENSMUST00000106933.2	5191	19	84640	-2391	84640	2374	3prime_fragment	FALSE	canonical	3	113	junction_1	2.62466929133727	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAAGGTTTTACTGTTG	NA	False	NA	NA	False	AGTAAA	-45	NA	101492430	101502370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101492452_101493954_101494098_101496462_101496640_101497668
ES.23815.7	chr4	+	4359	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	1	0	1	0	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276486	101324192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23815.8	chr4	+	1701	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	33	2452	-9	764	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCTGTCAGTGTTTTTCT	NA	False	NA	4	True	AAGAAA	-31	NA	101276506	101321740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ES.23816.1	chr4	-	1492	1	Intergenic	novelGene_19538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	101281625	101280133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101280100_101281600
ES.23817.1	chr4	-	2009	1	Intergenic	novelGene_19539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACAACACGCACACAC	NA	False	NA	NA	False	NA	NA	NA	101307579	101305570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101305600_101307600
ES.23818.1	chr4	-	2945	1	Antisense	novelGene_ENSMUSG00000028528.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101366972	101364027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_101364000_101367000
ES.23819.1	chr4	+	1820	4	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	-861	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	285.385119911089	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTGCATTTCATA	7354	False	NA	6	True	AATAAA	-18	NA	101504053	101516559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101504086_101509595_101509672_101513305_101513493_101515034
ES.23819.10	chr4	+	1940	4	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	285.385119911089	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTGCATTTCATA	8297	False	NA	6	True	AATAAA	-18	NA	101504996	101516559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101505149_101509595_101509672_101513305_101513493_101515034
ES.23819.11	chr4	+	3611	2	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	2446	1956	2371	-1956	internal_fragment	FALSE	canonical	3	655	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACTAGAGGGCACTCT	NA	False	NA	NA	False	NA	NA	NA	101507360	101514605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101509672_101513305
ES.23819.12	chr4	+	3905	3	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	2562	4	2487	-4	3prime_fragment	FALSE	canonical	3	539	junction_2	58	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAGAGTTGCATTTCA	NA	False	NA	4	True	AATAAA	-16	NA	101507476	101516557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101509672_101513305_101513493_101515034
ES.23819.13	chr4	+	6860	1	NIC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	2756	-1956	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACTAGAGGGCACTCT	259	False	NA	NA	False	NA	NA	NA	101507745	101514605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101507700_101514600
ES.23819.2	chr4	+	2340	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	-444	2	-444	-2	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTGCATTTCATA	7771	False	NA	6	True	AATAAA	-18	NA	101504470	101516559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ES.23819.3	chr4	+	2334	5	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	-330	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.316915940478	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAGTTGCATTTCATA	7885	False	NA	6	True	AATAAA	-18	NA	101504584	101516559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101505023_101507060_101507169_101509595_101509672_101513305_101513493_101515034
ES.23819.4	chr4	+	1847	5	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	265.502354038528	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGAGTTGCATTTCAT	8197	False	NA	5	True	AATAAA	-17	NA	101504896	101516558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034_101515849_101515914
ES.23819.6	chr4	+	5111	2	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	7	1956	7	-1956	intron_retention	FALSE	canonical	3	622	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCACTAGAGGGCACTCT	8222	False	NA	NA	False	NA	NA	NA	101504921	101514605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101505023_101509595
ES.23819.8	chr4	+	1676	3	NIC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	36	1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	296.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTTGCATTTCATAAAT	8251	False	NA	9	True	AATAAA	-21	NA	101504950	101516562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_101505023_101509595_101509672_101515034
ES.23819.9	chr4	+	1868	3	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGAGAGTTGCATTTCA	8258	False	NA	4	True	AATAAA	-16	NA	101504957	101516557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101505227_101509595_101509672_101515034
ES.2382.1	chr10	+	177	1	Intergenic	novelGene_1817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGCTCTAATACAGAT	NA	False	NA	NA	False	NA	NA	NA	17794076	17794253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_17794100_17794300
ES.23820.1	chr4	+	3346	1	Intergenic	novelGene_19543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTTTTTCGCTTGCT	NA	False	NA	NA	False	NA	NA	NA	101518510	101521856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101518500_101521900
ES.23821.1	chr4	+	5542	19	FSM	ENSMUSG00000057722.18	ENSMUST00000106921.9	5542	19	2	-2	-1	2	multi-exon	FALSE	canonical	0	0	junction_5	1.86007433808702	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTGTGCTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	101574602	101670866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191_101649268_101668544
ES.23821.2	chr4	+	3303	18	FSM	ENSMUSG00000057722.18	ENSMUST00000102777.10	3410	18	5	102	2	0	multi-exon	FALSE	canonical	0	0	junction_5	1.90791467532081	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATGTTGTTGTGTTCA	NA	False	NA	NA	False	TTTAAA	-13	NA	101574605	101649353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191
ES.23821.3	chr4	+	4543	19	NNC	ENSMUSG00000057722.18	novel	5542	19	NA	NA	14	4032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.03366724641368	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTCCTTTATTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	101574617	101653487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191_101649268_101652149
ES.23821.4	chr4	+	3594	19	NNC	ENSMUSG00000057722.18	novel	5542	19	NA	NA	26	-3990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.03366724641368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGACCTCTATCCTATA	NA	False	NA	NA	False	AATAAA	-24	NA	101574629	101666874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191_101649268_101666473
ES.23821.5	chr4	+	3447	9	NNC	ENSMUSG00000057722.18	novel	3410	18	NA	NA	420	-12342	intron_retention	TRUE	non_canonical	0	0	junction_5	1.86664806538351	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAAAAGAAAATGA	NA	False	NA	NA	False	TTTAAA	-29	NA	101575023	101624448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101624070_101624133
ES.23821.6	chr4	+	3006	18	FSM	ENSMUSG00000057722.18	ENSMUST00000102777.10	3410	18	504	-100	501	100	multi-exon	FALSE	canonical	0	0	junction_5	1.90791467532081	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGACTAAATGGGCCTT	NA	False	NA	NA	False	AATAAA	-39	NA	101575104	101649555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191
ES.23821.7	chr4	+	1670	9	NNC	ENSMUSG00000057722.18	novel	889	5	NA	NA	-8250	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.02715934252836	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATAAGGATGCCAACT	NA	False	NA	NA	False	AATAAA	-17	NA	101616993	101640003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101617184_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741
ES.23821.8	chr4	+	2709	5	NNC	ENSMUSG00000057722.18	novel	415	4	NA	NA	-69	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.29128784747792	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTTTTGTGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	101646041	101670863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101646154_101646459_101646556_101647997_101648104_101649191_101649268_101668544
ES.23821.9	chr4	+	179	1	ISM	ENSMUSG00000057722.18	ENSMUST00000106921.9	5542	19	94439	1646	22929	-1646	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	101669039	101669218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_101669000_101669200
ES.23822.1	chr4	-	105	1	Intergenic	novelGene_19544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAACAAAAAGACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101677222	101677117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101677100_101677200
ES.23823.1	chr4	-	130	1	Intergenic	novelGene_19545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	101682265	101682135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101682100_101682300
ES.23824.1	chr4	+	2493	1	Intergenic	novelGene_19546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCCCAGGACCA	NA	False	NA	NA	False	NA	NA	NA	101711714	101714207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101711700_101714200
ES.23825.1	chr4	+	4494	1	Intergenic	novelGene_19551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATCAATCTGAGGAGAC	6263	False	NA	NA	False	NA	NA	NA	101724166	101728660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101724200_101728700
ES.23826.1	chr4	-	1929	4	NNC	ENSMUSG00000035201.16	novel	1976	4	NA	NA	-29789	17	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	1.69967317119759	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCACTGTTTGCCTCC	NA	False	NA	NA	False	ATTAAA	-30	NA	101731009	101692148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101693139_101694021_101694595_101695022_101695337_101730957
ES.23826.2	chr4	-	2865	3	NIC	ENSMUSG00000035201.16	novel	1976	4	NA	NA	3	9	intron_retention	FALSE	canonical	0	0	junction_2	3	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTACTTCTCACTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	101701217	101692156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101694595_101695022_101695337_101701104
ES.23826.3	chr4	-	1547	4	NNC	ENSMUSG00000035201.16	novel	1976	4	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTACTCTTTACTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	101701217	101692163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101693139_101694449_101694595_101695022_101695337_101701104
ES.23826.4	chr4	-	2920	2	Intergenic	novelGene_19547	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	101730987	101720423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101723314_101730957
ES.23826.5	chr4	-	5356	1	Intergenic	novelGene_19548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGGTCTCGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	101725780	101720424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101720400_101725800
ES.23826.6	chr4	-	3081	2	Intergenic	novelGene_19549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGGTCTCGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	101728781	101720424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101723300_101728575
ES.23826.7	chr4	-	2910	2	Intergenic	novelGene_19550	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	False	NA	NA	False	NA	NA	NA	101731007	101720428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101723289_101730957
ES.23827.1	chr4	-	4378	1	Antisense	novelGene_ENSMUSG00000081045.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGTATGTGGAGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	101742669	101738291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_101738300_101742700
ES.23828.1	chr4	+	2182	1	Antisense	novelGene_ENSMUSG00000084208.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGAAAAGATGTTGCAG	NA	False	NA	NA	False	NA	NA	NA	101753121	101755303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_101753100_101755300
ES.23829.1	chr4	+	3021	3	NNC	ENSMUSG00000037028.8	novel	1455	3	NA	NA	-1968	1553	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATATGGTTCAT	NA	False	NA	NA	False	NA	NA	NA	101764349	101770658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101764446_101766835_101767628_101768525
ES.23829.2	chr4	+	3302	4	NNC	ENSMUSG00000037028.8	novel	1455	3	NA	NA	-1942	1546	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.49691252107735	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	101764375	101770651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101764446_101766290_101766605_101766835_101767628_101768525
ES.2383.1	chr10	-	4032	4	NNC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-298	2170	intron_retention	TRUE	non_canonical	0	0	junction_1	44.1688678696759	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAAGGGAGACAACCCT	8172	False	NA	NA	False	NA	NA	NA	17791268	17772612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17772623_17774787_17778126_17783781_17783937_17790739
ES.2383.10	chr10	-	2227	5	NNC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-58	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4642691338338	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATATTAAACTTTGC	NA	False	NA	-25	True	AATAAA	-8	NA	17823873	17774796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17775030_17777944_17778126_17783781_17783937_17790739_17791781_17823256
ES.2383.11	chr10	-	3718	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-44	1424	-44	-1417	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGGTGACGTTTTCTA	NA	False	NA	6	True	AATAAA	-25	NA	17823859	17776206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
ES.2383.12	chr10	-	2594	3	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	32	-1424	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	44	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTAACCTGGTGACG	NA	False	NA	-1	True	AATAAA	-18	NA	17823783	17776213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_17778126_17783781_17783937_17823256
ES.2383.13	chr10	-	2010	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	12	3076	12	175	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAGTTTACTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	17823803	17777858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
ES.2383.14	chr10	-	4535	3	NNC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-51	-9770	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAGTATGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	17823866	17787803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17789734_17789785_17791781_17823256
ES.2383.16	chr10	-	4624	2	ISM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-91	13024	-91	-9773	5prime_fragment	FALSE	canonical	3	53	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGGAAGTATGATTA	NA	False	NA	NA	False	NA	NA	NA	17823906	17787806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_17791781_17823256
ES.2383.2	chr10	-	5173	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	-64	-11	-64	11	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTTGGAAGTTTTT	NA	False	NA	0	True	AATAAA	-33	NA	17823879	17774771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
ES.2383.3	chr10	-	4278	5	NNC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0681953867004	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	-18	True	AATAAA	-15	NA	17823834	17774789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17775030_17775128_17778126_17783781_17783937_17791472_17791781_17823256
ES.2383.4	chr10	-	11929	3	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-35	0	intron_retention	FALSE	canonical	3	53	junction_2	18.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	-18	True	AATAAA	-15	NA	17823850	17774789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_17778126_17783781_17791781_17823256
ES.2383.5	chr10	-	4057	3	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-7	0	intron_retention	FALSE	canonical	1	2	junction_2	44	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	-18	True	AATAAA	-15	NA	17823822	17774789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_17778126_17783781_17783937_17823256
ES.2383.6	chr10	-	4937	5	NNC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	47	0	intron_retention	FALSE	non_canonical	0	0	junction_1	38.4642691338338	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAACTTTGCATTTTAG	NA	False	NA	-18	True	AATAAA	-15	NA	17823768	17774789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17776486_17776592_17778126_17783781_17783937_17790739_17791781_17823256
ES.2383.8	chr10	-	4156	1	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	5097	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATATTAAACTTTGC	NA	False	NA	-25	True	AATAAA	-8	NA	17778952	17774796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_17774800_17779000
ES.2383.9	chr10	-	3236	2	NNC	ENSMUSG00000039879.10	novel	360	2	NA	NA	5971	-7	intron_retention	TRUE	non_canonical	0	0	junction_1	0	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATATTAAACTTTGC	NA	False	NA	-25	True	AATAAA	-8	NA	17778078	17774796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_17777864_17777909
ES.23830.1	chr4	+	175	1	Intergenic	novelGene_19552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTAG	NA	False	NA	NA	False	NA	NA	NA	101775018	101775193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101775000_101775200
ES.23831.1	chr4	-	3402	2	NIC	ENSMUSG00000046133.4	novel	913	3	NA	NA	10	2354	intron_retention	FALSE	canonical	3	233	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101750976	101744862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101748198_101750909
ES.23831.10	chr4	-	1019	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9913	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	190.887983441133	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTCTTCTTGAT	NA	False	NA	-4	True	ATTAAA	-24	NA	101760899	101747218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760802
ES.23831.11	chr4	-	997	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9898	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.7956227839678	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTGTTTTTCTTCTTG	NA	False	NA	-6	True	ATTAAA	-22	NA	101760884	101747220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747732_101747881_101748198_101760342_101760431_101760802
ES.23831.12	chr4	-	1003	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.887983441133	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTGTTTTTCTTCTTG	NA	False	NA	-6	True	ATTAAA	-22	NA	101760887	101747220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760804
ES.23831.13	chr4	-	1036	4	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9897	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	187.893586904929	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTGTTTTTCTTCTTG	NA	False	NA	-6	True	ATTAAA	-22	NA	101760883	101747220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101760342_101760431_101760767
ES.23831.15	chr4	-	900	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-43696	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAATTTGTTTTTCTTCT	NA	False	NA	-8	True	ATTAAA	-20	NA	101794682	101747222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101794612
ES.23831.18	chr4	-	260	2	ISM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	12	786	12	-786	5prime_fragment	FALSE	canonical	3	233	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCCCTACCGCAACC	NA	False	NA	NA	False	CATAAA	-21	NA	101750974	101748002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_101748198_101750909
ES.23831.19	chr4	-	1018	1	FSM	ENSMUSG00000084208.2	ENSMUST00000117669.2	1019	1	-969	970	-969	-970	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101755148	101754130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101754100_101755100
ES.23831.2	chr4	-	3231	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	10	-2328	10	2328	multi-exon	FALSE	canonical	3	233	junction_2	115.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101750976	101744888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101747741_101747885_101748198_101750909
ES.23831.3	chr4	-	2774	2	NIC	ENSMUSG00000046133.4	novel	913	3	NA	NA	0	1716	intron_retention	FALSE	canonical	3	233	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGTCCTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	101750986	101745500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_101748198_101750909
ES.23831.4	chr4	-	7213	2	ISM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	-1872	-1716	-1872	1716	intron_retention	FALSE	canonical	3	464	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGTCCTTCATGAT	NA	False	NA	NA	False	NA	NA	NA	101752858	101745500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_101747741_101747885
ES.23831.5	chr4	-	2616	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	10	-1713	10	1713	multi-exon	FALSE	canonical	3	233	junction_2	115.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGTGATGGTCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	101750976	101745503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101747741_101747885_101748198_101750909
ES.23831.6	chr4	-	1741	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9899	362	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTCTCAATTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	101760885	101746854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101760342
ES.23831.7	chr4	-	1142	5	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9899	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	199.771119033758	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTTCTTCTTGATG	NA	False	NA	-3	True	ATTAAA	-25	NA	101760885	101747217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101747741_101747885_101748198_101748447_101748584_101760342_101760431_101760802
ES.23831.9	chr4	-	945	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	-34	2	-34	-2	multi-exon	FALSE	canonical	3	233	junction_2	115.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTCTTCTTGAT	NA	False	NA	-4	True	ATTAAA	-24	NA	101751020	101747218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_101747741_101747885_101748198_101750909
ES.23832.1	chr4	+	2871	4	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1947	1317	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_3	2.94392028877595	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCCAGCTCTCATGAATT	NA	False	NA	NA	False	AAAACA	-22	NA	101795656	101801697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101795732_101797576_101797891_101798317_101798903_101799800
ES.23832.2	chr4	+	3732	4	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1945	2180	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	2.94392028877595	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGTCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	101795658	101802560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101795732_101797576_101797891_101798317_101798903_101799800
ES.23832.3	chr4	+	1316	4	NNC	ENSMUSG00000070890.4	novel	1452	3	NA	NA	-1944	-235	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	2.94392028877595	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTTGTGTGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	101795659	101800145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_101795732_101797576_101797891_101798317_101798903_101799800
ES.23833.1	chr4	-	4977	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9759	4416	at_least_one_novel_splicesite	TRUE	non_canonical	2	19	junction_1	2.62466929133727	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTTTTGGCCATAGTG	NA	False	NA	NA	False	NA	NA	NA	101828487	101820233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101822289_101822494_101824980_101825125_101825438_101828362
ES.23833.2	chr4	-	2890	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9759	2123	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGGCATTTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	101828487	101822526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101824980_101825125_101825438_101828362
ES.23833.3	chr4	-	2014	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9721	1209	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTTTCTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	101828525	101823440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101824980_101825125_101825438_101828362
ES.23833.4	chr4	-	1988	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9826	1209	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	5.43650214343336	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTGTTTCTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	101828420	101823440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101824980_101825125_101825438_101827043_101827123_101828362
ES.23833.5	chr4	-	4844	2	ISM	ENSMUSG00000078626.3	ENSMUST00000106916.2	951	4	9813	-1206	9813	1206	intron_retention	FALSE	canonical	2	20	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTGTTTGTTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	101828433	101823443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_101824980_101825125
ES.23833.6	chr4	-	2175	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9753	1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.17856276425687	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	101828493	101823444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_101824980_101825125_101825438_101826925_101827123_101828362
ES.23834.1	chr4	+	158	1	Intergenic	novelGene_19553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATCAATCAATCAATCAA	NA	False	NA	NA	False	NA	NA	NA	101859177	101859335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_101859200_101859300
ES.23835.1	chr4	-	204	1	Intergenic	novelGene_19554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	2370	False	NA	NA	False	NA	NA	NA	101901321	101901117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_101901100_101901300
ES.23836.1	chr4	-	2536	1	Intergenic	novelGene_19555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATGCCAGGCCCTTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	102696867	102694331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_102694300_102696900
ES.23837.1	chr4	-	2321	5	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	1.6393596310755	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCCTTGGTTACAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	102716588	102696990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102702150_102702386_102702701_102702798_102710577_102710636_102716541
ES.23837.2	chr4	-	2271	4	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCCTTGGTTACAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	102716596	102696990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102702150_102702386_102702701_102702798_102716541
ES.23837.3	chr4	-	714	4	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAATCTTTGCGTGTTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	102716566	102698517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102702150_102702386_102702701_102702798_102716541
ES.23837.4	chr4	-	373	2	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCATGTGGAAATCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	102716566	102698527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102716541
ES.23837.5	chr4	-	762	5	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCATGTGGAAATCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	102716567	102698527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102700752_102700810_102702150_102702386_102702701_102702798_102716541
ES.23837.6	chr4	-	604	3	Antisense	novelGene_ENSMUSG00000028524.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGCATGTGGAAATC	NA	False	NA	NA	False	ATTAAA	-11	NA	102716564	102698529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_102698876_102702150_102702386_102716541
ES.23838.1	chr4	+	210	1	Intergenic	novelGene_19556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGCCAAATTCCATAAT	NA	False	NA	NA	False	NA	NA	NA	102883345	102883555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_102883300_102883600
ES.23839.1	chr4	+	4989	1	FSM	ENSMUSG00000080744.2	ENSMUST00000119011.2	216	1	-2828	-1945	-2828	1945	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAGAATCCTGAAT	2081	False	NA	NA	False	NA	NA	NA	102957895	102962884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102957900_102962900
ES.2384.1	chr10	-	800	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	48	-2	-22	2	multi-exon	FALSE	canonical	3	143	junction_1	12	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGGCTGTGTTTTGT	NA	False	NA	-2	True	AATAAA	-24	NA	17898988	17887005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17887565_17894586_17894654_17898814
ES.2384.2	chr10	-	724	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220433.2	275	3	-7	-442	-7	1	multi-exon	FALSE	canonical	3	8	junction_2	67.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTGGTGGCTGTGT	NA	False	NA	-7	True	AATAAA	-19	NA	17898845	17887010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17887565_17894586_17894654_17898742
ES.2384.4	chr10	-	677	3	FSM	ENSMUSG00000078453.4	ENSMUST00000218994.2	425	3	5	-257	5	-3	multi-exon	FALSE	canonical	1	1	junction_2	71	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAAATTTCCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-15	NA	17898621	17887014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17887565_17894586_17894654_17898561
ES.2384.5	chr10	-	355	3	FSM	ENSMUSG00000078453.4	ENSMUST00000218994.2	425	3	5	65	5	1	multi-exon	FALSE	canonical	1	1	junction_2	71	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAAAAGACTAACGTGA	NA	False	NA	NA	False	GATAAA	-12	NA	17898621	17887336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_17887565_17894586_17894654_17898561
ES.23840.1	chr4	+	4820	14	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	42.5459028127721	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	2453	False	NA	17	True	ATTAAA	-18	NA	102971527	103022951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.10	chr4	+	4790	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-99	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	41.8667935524905	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2785	False	NA	15	True	ATTAAA	-16	NA	102971859	103022949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.11	chr4	+	4867	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	47.5884246772816	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2785	False	NA	15	True	ATTAAA	-16	NA	102971859	103022949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972021_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.12	chr4	+	4919	16	NNC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-89	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	57.2954913874847	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATACTTGTGTGGTGT	2795	False	NA	9	True	ATTAAA	-10	NA	102971869	103022943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102972021_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103018968_103019040_103019619
ES.23840.14	chr4	+	3191	4	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-15	2932	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	52.3513769319076	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTTGTGGTATTAATA	2869	False	NA	NA	False	AATAAA	-19	NA	102971943	102991150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162
ES.23840.15	chr4	+	4778	15	NIC	ENSMUSG00000028522.17	novel	4698	15	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	56.3580481549595	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTGTCTAGTTA	2871	False	NA	16	True	ATTAAA	-17	NA	102971945	103022950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102986537_102986611_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.16	chr4	+	3224	4	NNC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-12	2929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.8753449713741	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTGTTGTGGTATTA	2872	False	NA	NA	False	AATAAA	-16	NA	102971946	102991147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102972021_102972756_102972897_102984469_102984495_102988162
ES.23840.17	chr4	+	4729	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	51.7261726669924	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	3045	False	NA	10	True	ATTAAA	-11	NA	102972119	103022944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972190_102972756_102972858_102975477_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.18	chr4	+	4771	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	50.6150437425596	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	3045	False	NA	10	True	ATTAAA	-11	NA	102972119	103022944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102972190_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.19	chr4	+	5255	16	NNC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.0163548202902	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	3089	False	NA	15	True	ATTAAA	-16	NA	102972163	103022949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102972564_102972756_102972858_102973140_102973291_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017021_103019619
ES.23840.2	chr4	+	3260	2	FSM	ENSMUSG00000028522.17	ENSMUST00000136092.2	475	2	-40	-2745	-40	-17	multi-exon	FALSE	canonical	3	20	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGGCCTTTAACAACAAC	2472	False	NA	NA	False	NA	NA	NA	102971546	102975846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102971717_102972756
ES.23840.20	chr4	+	4832	16	NNC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	11	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	55.9188300624714	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	3089	False	NA	10	True	ATTAAA	-11	NA	102972163	103022944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102972190_102972458_102972564_102972756_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.21	chr4	+	4800	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	-46	-2	-46	0	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	297	False	NA	17	True	ATTAAA	-18	NA	102976436	103022951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.22	chr4	+	4825	14	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	47.8193098081993	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	343	False	NA	17	True	ATTAAA	-18	NA	102976482	103022951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103018968_103019040_103019619
ES.23840.23	chr4	+	4665	13	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	38.2335658231815	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTGTCTAGTTA	413	False	NA	16	True	ATTAAA	-17	NA	102976552	103022950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997423_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.25	chr4	+	4632	13	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	39.0408439970245	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTGTGTGGTGTCTAG	422	False	NA	13	True	ATTAAA	-14	NA	102976561	103022947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012773_103016878_103017019_103019619
ES.23840.26	chr4	+	2917	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	83	1752	-21	1177	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTCTGTGTGATTTT	426	False	NA	NA	False	AATGAA	-16	NA	102976565	103021197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.27	chr4	+	1710	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	89	2953	-15	-24	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGGTTGGGGGGT	432	False	NA	NA	False	AGTAAA	-16	NA	102976571	103019996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.28	chr4	+	1978	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	93	2681	-11	248	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTGTGTTTC	436	False	NA	NA	False	ATTAAA	-29	NA	102976575	103020268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.29	chr4	+	2327	13	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	-10	637	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	39.0408439970245	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTCTGAGTCTGTCAGC	437	False	NA	NA	False	NA	NA	NA	102976576	103020657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012773_103016878_103017019_103019619
ES.23840.3	chr4	+	4640	15	NNC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	50.5769266583497	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTTGTGTGGTGTCTA	2485	False	NA	12	True	ATTAAA	-13	NA	102971559	103022946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619_103020429_103020571
ES.23840.30	chr4	+	4721	14	NIC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	49.2443490885986	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	446	False	NA	14	True	ATTAAA	-15	NA	102976585	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102976707_102984469_102984495_102986537_102986611_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.31	chr4	+	4648	12	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.55034621939	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	447	False	NA	17	True	ATTAAA	-18	NA	102976586	103022951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102988139_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.33	chr4	+	4666	13	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.9113601204803	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	450	False	NA	14	True	ATTAAA	-15	NA	102976589	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000308_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.35	chr4	+	4552	6	NNC	ENSMUSG00000028522.17	novel	1918	7	NA	NA	10	2626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.6201428046467	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGTATATATTGA	457	False	NA	NA	False	NA	NA	NA	102976596	103004246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102988139_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330
ES.23840.38	chr4	+	4452	11	NIC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41.9094261473478	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	471	False	NA	14	True	ATTAAA	-15	NA	102976610	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102976707_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.4	chr4	+	656	5	ISM	ENSMUSG00000028522.17	ENSMUST00000149259.8	821	9	-70	11900	0	272	5prime_fragment	FALSE	canonical	3	11	junction_2	49.544802956516	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATACATCTGTATCAG	2517	False	NA	NA	False	AATAAA	-24	NA	102971591	102988490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_102971717_102972756_102972858_102975435_102975513_102984469_102984495_102988162
ES.23840.40	chr4	+	4541	12	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	83	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6215737721446	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	550	False	NA	10	True	ATTAAA	-11	NA	102976689	103022944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102976707_102988145_102988309_102996554_102996722_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016877_103017019_103019619
ES.23840.41	chr4	+	4931	13	NNC	ENSMUSG00000028522.17	novel	1079	7	NA	NA	152	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9853070613362	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	619	False	NA	14	True	ATTAAA	-15	NA	102976758	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102977163_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.42	chr4	+	1441	12	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	7861	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.1910725665487	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAGTCCGGGCTCATC	5765	False	NA	NA	False	GATAAA	-11	NA	102984467	103019864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102984495_102988162_102988309_102996558_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.43	chr4	+	4470	12	ISM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	7985	60	7861	-57	3prime_fragment	FALSE	canonical	3	105	junction_6	14.1427199974269	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCCTCCCATTTCCTT	5765	False	NA	-45	True	TTTAAA	-32	NA	102984467	103022889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.44	chr4	+	4415	11	NNC	ENSMUSG00000028522.17	novel	4752	13	NA	NA	11637	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	42.2446446310062	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	1839	False	NA	14	True	ATTAAA	-15	NA	102988243	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019625
ES.23840.45	chr4	+	3953	1	Intergenic	novelGene_19557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAAGCTTTCTTTCCTC	242	False	NA	NA	False	TTTAAA	-6	NA	102989855	102993808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_102989900_102993800
ES.23840.46	chr4	+	177	1	Intergenic	novelGene_19558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103012293	103012470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_103012300_103012500
ES.23840.47	chr4	+	4048	2	FSM	ENSMUSG00000028522.17	ENSMUST00000128536.2	1637	2	518	-2929	518	0	multi-exon	FALSE	canonical	3	135	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	NA	False	NA	15	True	ATTAAA	-16	NA	103016300	103022949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_103017019_103019619
ES.23840.5	chr4	+	4973	16	NNC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	54.6438976973235	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTGTGGTGTCTAGT	2524	False	NA	14	True	ATTAAA	-15	NA	102971598	103022948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102971717_102972756_102972858_102973140_102973291_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.6	chr4	+	4776	15	NIC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	49.2859730842067	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTGTCTAGTTA	2531	False	NA	16	True	ATTAAA	-17	NA	102971605	103022950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_102971717_102972756_102972858_102975477_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.7	chr4	+	3436	6	NNC	ENSMUSG00000028522.17	novel	821	9	NA	NA	-8	2930	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.2446951457718	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGTTGTGGTATTAA	2545	False	NA	NA	False	AATAAA	-17	NA	102971619	102991148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102971717_102972756_102972858_102973140_102973291_102975435_102975513_102984469_102984495_102988162
ES.23840.8	chr4	+	4928	16	NNC	ENSMUSG00000028522.17	novel	4830	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	59.4715244652617	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	2555	False	NA	15	True	ATTAAA	-16	NA	102971629	103022949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102971717_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005013_103005152_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23840.9	chr4	+	4947	15	NNC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-108	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.4869760327381	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTGTGTGGTGTCTAG	2776	False	NA	13	True	ATTAAA	-14	NA	102971850	103022947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_102972021_102972756_102972858_102973140_102973291_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ES.23841.1	chr4	-	3772	17	FSM	ENSMUSG00000035126.20	ENSMUST00000106868.4	4045	17	273	0	17	0	multi-exon	FALSE	non_canonical	0	0	junction_10	2.14239206262533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCATTTTATTTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	102971479	102895265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_102896539_102905406_102905564_102906595_102906823_102907295_102907395_102916814_102916937_102917074_102917233_102919492_102919645_102921660_102921748_102923456_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102960423_102960602_102971306
ES.23841.2	chr4	-	3501	15	NIC	ENSMUSG00000035126.20	novel	4045	17	NA	NA	17	-6	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_9	2.01524799709513	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTATTCATTTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	102971479	102895271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_102896539_102905406_102905564_102906595_102906823_102907295_102907395_102916814_102916937_102917074_102917233_102919492_102919645_102923456_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102971306
ES.23841.3	chr4	-	3720	16	NIC	ENSMUSG00000035126.20	novel	4045	17	NA	NA	-28	-10	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	2.18479594775653	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTGAAAATGTATTCATT	NA	False	NA	NA	False	AATAAA	-10	NA	102971524	102895275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_102896539_102905406_102905564_102906595_102906823_102907295_102907395_102916814_102916937_102917074_102917233_102919492_102919645_102923456_102923684_102929845_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102960423_102960602_102971306
ES.23841.4	chr4	-	3489	15	NIC	ENSMUSG00000035126.20	novel	4045	17	NA	NA	20	-7718	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	2.34846888896766	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTATAAGATGTTAGA	NA	False	NA	NA	False	NA	NA	NA	102971476	102904186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_102905564_102906595_102906823_102907295_102907395_102916814_102916937_102917074_102917233_102919492_102919645_102921660_102921748_102929845_102930041_102939409_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102960423_102960602_102971306
ES.23841.5	chr4	-	3016	1	NIC	ENSMUSG00000035126.20	novel	3479	15	NA	NA	9476	-19796	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGACCAAAAAAGAATAAG	NA	False	NA	NA	False	NA	NA	NA	102961945	102958929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_102958900_102961900
ES.23841.6	chr4	-	6060	1	Genic_Genomic	ENSMUSG00000035126.20	novel	NA	NA	NA	NA	-291	-26850	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGATGCAGTGTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	102972043	102965983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_102966000_102972000
ES.23842.1	chr4	-	4581	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-553	-7	-192	0	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5105	False	NA	2	True	AATAAA	-17	NA	103072553	103027845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.11	chr4	-	4060	12	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	77	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.2984391095787	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGTTAGAATTCC	5866	False	NA	-2	True	AATAAA	-13	NA	103071792	103027849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030978_103042018_103042102_103046983_103047063_103048025_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071619
ES.23842.14	chr4	-	1255	12	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	-70	-2824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.3229693085169	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGTGTTTTGAAAT	5588	False	NA	NA	False	NA	NA	NA	103072070	103030676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062384_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.15	chr4	-	1365	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	-214	2870	147	-2870	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTACTGGGTGGGTTT	5444	False	NA	NA	False	NA	NA	NA	103072214	103030722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.16	chr4	-	1389	12	NNC	ENSMUSG00000028521.18	novel	663	6	NA	NA	-29	-13563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3229693085169	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTATTTAACATTTTT	5268	False	NA	NA	False	NA	NA	NA	103072390	103041415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103041519_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.2	chr4	-	4518	13	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	-179	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.7221960167482	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5118	False	NA	2	True	AATAAA	-17	NA	103072540	103027845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030054_103030103_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.4	chr4	-	4252	12	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.9192585078896	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5291	False	NA	2	True	AATAAA	-17	NA	103072367	103027845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030054_103030103_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23842.5	chr4	-	4366	4	ISM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	22900	-7	22769	0	3prime_fragment	FALSE	canonical	3	49	junction_1	4.54606056566195	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	NA	False	NA	2	True	AATAAA	-17	NA	103049100	103027845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028
ES.23842.6	chr4	-	3972	12	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.6922605093205	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTAGAATTCCTTCC	5658	False	NA	2	True	AATAAA	-17	NA	103072000	103027845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030054_103030103_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071183_103071860
ES.23842.8	chr4	-	4187	12	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	-72	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.5058302822672	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGTTAGAATTCC	5586	False	NA	-2	True	AATAAA	-13	NA	103072072	103027849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103054478_103054576_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071183_103071860
ES.23842.9	chr4	-	4121	13	NNC	ENSMUSG00000028521.18	novel	4021	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	18.8230060180502	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGTTAGAATTCC	5658	False	NA	-2	True	AATAAA	-13	NA	103072000	103027849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103054478_103054576_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ES.23843.1	chr4	+	2515	1	FSM	ENSMUSG00000107726.2	ENSMUST00000204816.2	1891	1	-618	-6	-618	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGTTGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	103074280	103076795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_103074300_103076800
ES.23844.1	chr4	+	1756	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	-6	-15	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	27.5680975041804	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTCATCTGTCCT	36	False	NA	1	True	AATAAA	-13	NA	103171002	103223625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103223169
ES.23844.10	chr4	+	4320	9	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	35	-15	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	30.59998978758	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTCATCTGTCCT	77	False	NA	1	True	AATAAA	-13	NA	103171043	103223625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ES.23844.11	chr4	+	1640	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	36	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	35.3449473917058	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCATCTGTCCTTGCCT	78	False	NA	6	True	AATAAA	-18	NA	103171044	103223630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_103171081_103176218_103176726_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ES.23844.12	chr4	+	5136	1	NIC	ENSMUSG00000035069.4	novel	421	4	NA	NA	37823	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCAGTGTTTTCTTCTT	9073	False	NA	NA	False	AATAAA	-14	NA	103223927	103229063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_103223900_103229100
ES.23844.2	chr4	+	4134	7	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	32224	0	5330	5prime_fragment	FALSE	canonical	3	69	junction_1	8.07086667520217	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATAATGTCTTCGGCC	42	False	NA	NA	False	ATTAAA	-18	NA	103171008	103191416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501
ES.23844.3	chr4	+	1911	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	4	0	-4	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTGCCTTAGTTT	42	False	NA	12	True	AATAAA	-24	NA	103171008	103223636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ES.23844.4	chr4	+	1415	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	30.6114557721418	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCAGTGTTTTCTTCTT	56	False	NA	NA	False	AATAAA	-14	NA	103171022	103229063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103228928
ES.23844.5	chr4	+	1142	7	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	22	-15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	38.1735801598726	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTCATCTGTCCT	64	False	NA	1	True	AATAAA	-13	NA	103171030	103223625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_103171081_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ES.23844.6	chr4	+	2819	9	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	29	-8611	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	32.3254930356832	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGCCTTCAGATTATT	71	False	NA	NA	False	NA	NA	NA	103171037	103215029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103213625
ES.23844.7	chr4	+	1961	10	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	34	-15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.2935381197454	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTCATCTGTCCT	76	False	NA	1	True	AATAAA	-13	NA	103171042	103223625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ES.23844.8	chr4	+	4191	8	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	34	5326	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	37.0162677971815	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGATATATAATGTCTTC	76	False	NA	NA	False	ATTAAA	-14	NA	103171042	103191412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_103171081_103173440_103173536_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501
ES.23844.9	chr4	+	1862	8	NNC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	41.9348376918869	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTGCCTTAGTTT	77	False	NA	12	True	AATAAA	-24	NA	103171043	103223636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_103171196_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
ES.23845.1	chr4	-	175	1	Intergenic	novelGene_19559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGAGAAGAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	103176123	103175948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_103175900_103176100
ES.23846.1	chr4	-	1378	2	Antisense	novelGene_ENSMUSG00000086136.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGGTGGTCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	103276572	103273991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_103275204_103276406
ES.23847.1	chr4	+	178	1	Intergenic	novelGene_19560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103336130	103336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_103336100_103336300
ES.23848.1	chr4	+	450	1	Intergenic	novelGene_19561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTCAAGAGATATGAAT	NA	False	NA	NA	False	NA	NA	NA	103422004	103422454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_103422000_103422500
ES.23849.1	chr4	+	174	1	Intergenic	novelGene_19562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	103550499	103550673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_103550500_103550700
ES.2385.1	chr10	+	3128	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-513	-20	-434	-3	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTTGGCGAGCCTC	NA	False	NA	22	True	AATAAA	-33	NA	17931174	18000900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.10	chr10	+	7436	18	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-308	-3	intron_retention	FALSE	canonical	3	27	junction_8	59.7023180622572	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAATACATTGTATTTGT	NA	False	NA	11	True	AATAAA	-22	NA	17931300	18000889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983418_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346
ES.2385.12	chr10	+	6177	18	NIC	ENSMUSG00000019854.18	novel	2537	19	NA	NA	-305	6	intron_retention	FALSE	canonical	3	82	junction_8	48.6040424365759	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAGAATACATTGTATT	NA	False	NA	8	True	AATAAA	-19	NA	17931303	18000886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.13	chr10	+	2986	20	NNC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-303	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	65.6557799469568	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17931305	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993487_17994680_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.15	chr10	+	3097	21	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-303	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	79.2917870904673	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTCTGGAGAATACAT	NA	False	NA	2	True	AATAAA	-13	NA	17931305	18000880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17965320_17967933_17968054_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.16	chr10	+	2920	20	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-298	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	64.6914260889207	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17931310	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969589_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.17	chr10	+	2924	20	NNC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-296	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.1345585566332	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGGCGAGCCTCAAC	NA	False	NA	25	True	AATAAA	-36	NA	17931312	18000903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931795_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983418_17983497_17990146_17990235_17991463_17991566_17993409_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.18	chr10	+	3417	15	ISM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	-370	3661	-291	28	intron_retention	FALSE	canonical	3	129	junction_9	34.932003921321	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATTAAATTAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	17931317	17997219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912
ES.2385.2	chr10	+	2450	20	NNC	ENSMUSG00000019854.18	novel	721	8	NA	NA	-389	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7242202707184	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17931219	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931240_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.20	chr10	+	1884	12	NIC	ENSMUSG00000019854.18	novel	2208	16	NA	NA	-271	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.5819491852835	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTGGAGAATACATTG	NA	False	NA	4	True	AATAAA	-15	NA	17931337	18000882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.21	chr10	+	6229	19	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-271	-1	intron_retention	FALSE	canonical	3	129	junction_8	42.5375650977397	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17931337	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.22	chr10	+	2800	19	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-267	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	67.7723358471053	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTGTATTTGTTGGC	NA	False	NA	15	True	AATAAA	-26	NA	17931341	18000893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17931864_17965195_17965320_17968592_17968790_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.23	chr10	+	2691	20	NNC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-262	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.319764674016	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTCTGGAGAATACAT	NA	False	NA	2	True	AATAAA	-13	NA	17931346	18000880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931371_17931537_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993409_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.24	chr10	+	2839	1	Intergenic	novelGene_1818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAAGGCGTAGCTCTCA	7013	False	NA	NA	False	NA	NA	NA	17954516	17957355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_17954500_17957400
ES.2385.25	chr10	+	7231	12	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	249	-8	intron_retention	FALSE	canonical	3	166	junction_7	27.635167438227	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17967464	17997183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912
ES.2385.26	chr10	+	1961	16	NNC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	605	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.8261019784557	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17969523	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993409_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.27	chr10	+	1658	14	ISM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	38902	1	311	1	3prime_fragment	FALSE	canonical	3	129	junction_3	49.2807438658989	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTCTCTGGAGAATACA	NA	False	NA	1	True	AATAAA	-12	NA	17970589	18000879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.28	chr10	+	8205	4	ISM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	46056	3661	-2216	28	intron_retention	FALSE	canonical	3	129	junction_1	43.0426145426444	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATTAAATTAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	17977743	17997219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_17980024_17983415_17983497_17990146_17990235_17991463
ES.2385.29	chr10	+	4411	5	ISM	ENSMUSG00000019854.18	ENSMUST00000150029.8	2462	19	46666	3673	-1542	28	intron_retention	FALSE	canonical	3	82	junction_1	67.0983420063417	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATTAAATTAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	17978417	17997219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674
ES.2385.30	chr10	+	5746	10	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	260	6	intron_retention	FALSE	canonical	3	166	junction_1	41.8625027417433	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAGAATACATTGTATT	NA	False	NA	8	True	AATAAA	-19	NA	17980219	18000886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_17983497_17990146_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.31	chr10	+	2046	3	ISM	ENSMUSG00000019854.18	ENSMUST00000150029.8	2462	19	66174	2	-6	-2	intron_retention	FALSE	canonical	3	274	junction_1	23	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATACATTGTATTTGTT	NA	False	NA	12	True	AATAAA	-23	NA	17997925	18000890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_17998279_17998772_17998922_17999346
ES.2385.4	chr10	+	2961	19	FSM	ENSMUSG00000019854.18	ENSMUST00000164556.8	2537	19	-434	10	-355	1	multi-exon	FALSE	canonical	3	82	junction_9	47.5026964796685	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATTGTATTTGTTGGC	NA	False	NA	15	True	AATAAA	-26	NA	17931253	18000893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.2385.7	chr10	+	2944	19	NNC	ENSMUSG00000019854.18	novel	2537	19	NA	NA	-313	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	66.3169763938668	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACATTGTATTTGTTG	NA	False	NA	13	True	AATAAA	-24	NA	17931295	18000891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999319_17999453_18000627
ES.2385.9	chr10	+	3002	20	NNC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-308	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.6581847899932	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATACATTGTATTTG	NA	False	NA	10	True	AATAAA	-21	NA	17931300	18000888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971917_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ES.23850.1	chr4	+	5443	17	NNC	ENSMUSG00000028519.17	novel	641	7	NA	NA	157	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	19.9714640174425	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGCTTAGCCTGGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	104224466	104602035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224667_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
ES.23850.10	chr4	+	153	1	Intergenic	novelGene_19566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	104502371	104502524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104502400_104502500
ES.23850.11	chr4	+	6549	1	NIC	ENSMUSG00000028519.17	novel	2462	15	NA	NA	99117	-2839	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGTTTGTACCACAC	NA	False	NA	NA	False	CATAAA	-15	NA	104561609	104568158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_104561600_104568200
ES.23850.2	chr4	+	2951	15	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-37	689	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	19.9335631229219	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTTCGCTGCTGTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	104224749	104599683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
ES.23850.3	chr4	+	1172	7	ISM	ENSMUSG00000028519.17	ENSMUST00000106830.9	5278	15	-33	64457	-33	5	5prime_fragment	FALSE	canonical	3	42	junction_1	2.40947204913349	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTAACTTTCTTAG	NA	False	NA	13	True	AATAAA	-20	NA	104224753	104537584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
ES.23850.4	chr4	+	1368	4	NNC	ENSMUSG00000028519.17	novel	2462	15	NA	NA	-32	-72572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9544984001001	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAAAATGAGAGTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	104224754	104463417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224915_104312500_104312584_104336270_104336473_104462494
ES.23850.5	chr4	+	5302	15	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	19.9335631229219	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGCCTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	104224754	104602039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
ES.23850.6	chr4	+	5396	17	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	20.376150274279	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGCCTGGTTTTATTCC	NA	False	NA	NA	False	AATAAA	-18	NA	104224767	104602041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266_104589378_104598709
ES.23850.7	chr4	+	1233	8	NNC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	-10	6	intron_retention	FALSE	canonical	0	0	junction_1	20.9547617694959	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTGTAACTTTCTTAGA	NA	False	NA	14	True	AATAAA	-21	NA	104224776	104537585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_104224915_104312500_104312584_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266
ES.23850.8	chr4	+	1741	1	Intergenic	novelGene_19564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTGCAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104363997	104365738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104364000_104365700
ES.23850.9	chr4	+	5333	1	Intergenic	novelGene_19565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGGACCAGTAATGAGA	NA	False	NA	NA	False	NA	NA	NA	104478554	104483887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104478600_104483900
ES.23851.1	chr4	-	1982	1	Intergenic	novelGene_19563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGCAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AAAAAG	-30	NA	104244921	104242939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_104242900_104244900
ES.23852.1	chr4	+	1914	4	FSM	ENSMUSG00000029656.14	ENSMUST00000123892.2	1061	4	-23	-830	-23	822	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTGTTACGGGT	NA	False	NA	NA	False	AATAAA	-11	NA	104656381	104662567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_104656711_104657531_104657686_104658534_104658604_104661205
ES.23852.2	chr4	+	1084	4	FSM	ENSMUSG00000029656.14	ENSMUST00000123892.2	1061	4	-21	-2	-21	2	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATCTCTGTGTGGCA	NA	False	NA	NA	False	AATAAA	-17	NA	104656383	104661739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_104656711_104657531_104657686_104658534_104658604_104661205
ES.23853.1	chr4	+	207	1	Intergenic	novelGene_19567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGCGAGCGTGTGC	NA	False	NA	NA	False	NA	NA	NA	104664150	104664357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104664200_104664400
ES.23854.1	chr4	-	5553	1	Antisense	novelGene_ENSMUSG00000078612.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGTTGTTTTTTATT	2044	False	NA	NA	False	AATAAA	-19	NA	104874408	104868855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_104868900_104874400
ES.23855.1	chr4	+	3500	1	Intergenic	novelGene_19568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATTTCAGGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	104935575	104939075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104935600_104939100
ES.23856.1	chr4	+	4659	2	Antisense	novelGene_ENSMUSG00000028518.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGCGCAAACAAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	104958274	104965256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_104958963_104961285
ES.23857.1	chr4	-	8672	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	13	-716	13	716	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTCTATTCAGTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	104967074	104886354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.11	chr4	-	3302	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	18	4649	18	-4649	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGAGAAGGAGAGTGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	104967069	104891719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.12	chr4	-	3064	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-8	4913	-8	-4913	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAGCAAC	NA	False	NA	NA	False	TTTAAA	-40	NA	104967095	104891983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.13	chr4	-	2846	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-8	5131	-8	-5131	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCAAACATTTT	NA	False	NA	NA	False	NA	NA	NA	104967095	104892201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.14	chr4	-	1836	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-7	6140	-7	-6140	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACGTGCTCTGCAATAG	NA	False	NA	NA	False	TTTAAA	-17	NA	104967094	104893210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.2	chr4	-	8212	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-15	-228	-15	228	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGTGTCCATGATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	104967102	104886842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.3	chr4	-	8044	8	NIC	ENSMUSG00000028518.9	novel	7969	9	NA	NA	9	226	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	26.3733012800477	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTTGTGTCCATGATC	NA	False	NA	NA	False	AATAAA	-18	NA	104967078	104886844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104966901
ES.23857.4	chr4	-	8556	8	NIC	ENSMUSG00000028518.9	novel	7969	9	NA	NA	1	220	intron_retention	FALSE	canonical	3	64	junction_4	8.26351706513118	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATACTAGGTTGTGTCC	NA	False	NA	NA	False	AATAAA	-12	NA	104967086	104886850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.5	chr4	-	7986	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-14	-3	-14	3	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGAAGCTGCCTTAAT	NA	False	NA	3	True	AATAAA	-18	NA	104967101	104887067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23857.6	chr4	-	7818	8	NIC	ENSMUSG00000028518.9	novel	7969	9	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	26.3733012800477	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGTCTGAAGCTGC	NA	False	NA	-3	True	AATAAA	-12	NA	104967081	104887073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104966901
ES.23857.8	chr4	-	8169	7	NIC	ENSMUSG00000028518.9	novel	7969	9	NA	NA	21	-5	intron_retention	FALSE	canonical	2	4	junction_6	28.4355997533608	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGTTGTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-10	NA	104967066	104887075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104966901
ES.23857.9	chr4	-	7166	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	-7	810	-7	-810	multi-exon	FALSE	canonical	3	64	junction_5	8.06903804675625	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGAAGCCCATGTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	104967094	104887880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ES.23858.1	chr4	+	189	1	Intergenic	novelGene_19569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAGAATAGGATTA	NA	False	NA	NA	False	NA	NA	NA	104973566	104973755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_104973600_104973800
ES.23859.1	chr4	+	3243	7	NNC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	-1123	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.8808602102413	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATGTTTCTTTGGGA	NA	False	NA	34	True	AATAAA	-44	NA	105013420	105089982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_105013428_105014487_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.10	chr4	+	2725	5	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	37265	8	37265	-8	3prime_fragment	FALSE	canonical	3	181	junction_1	17.0495601116275	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCAAGGCACTGGTGCC	NA	False	NA	5	True	AATAAA	-15	NA	105051808	105089953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.11	chr4	+	6693	2	Intergenic	novelGene_19570	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAAAATCACAGTGAA	NA	False	NA	NA	False	NA	NA	NA	105079997	105159066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_105086663_105159038
ES.23859.12	chr4	+	8766	1	NIC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	66645	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGGCACTGGTGCCT	NA	False	NA	6	True	AATAAA	-16	NA	105081188	105089954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_105081200_105090000
ES.23859.13	chr4	+	2096	2	NNC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	68408	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACCAAGGCACTGGTG	NA	False	NA	3	True	AATAAA	-13	NA	105082951	105089951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_105083190_105088093
ES.23859.14	chr4	+	3355	1	Intergenic	novelGene_19571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATCTTATTGAACTTT	NA	False	NA	NA	False	AAAAAG	-5	NA	105083368	105086723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_105083400_105086700
ES.23859.2	chr4	+	3778	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-611	-8	-611	8	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGAGCTGTTAAAAGGA	NA	False	NA	21	True	AATAAA	-31	NA	105013932	105089969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.3	chr4	+	3667	5	NIC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	-119	-6	intron_retention	FALSE	canonical	3	181	junction_2	19.9687255477159	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGCACTGGTGCCTG	NA	False	NA	7	True	AATAAA	-17	NA	105014424	105089955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_105015161_105051999_105052158_105065720_105066455_105076524_105076702_105088093
ES.23859.4	chr4	+	3090	5	NIC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	-96	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	93.3729082764374	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGGCACTGGTGCCT	NA	False	NA	6	True	AATAAA	-16	NA	105014447	105089954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_105015161_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.5	chr4	+	1654	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	-82	1587	-82	-1587	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGGTTGTTTGCCTGT	NA	False	NA	NA	False	AAAACA	-41	NA	105014461	105088374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.6	chr4	+	3233	7	NNC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.1359601097715	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGGCACTGGTGCCT	NA	False	NA	6	True	AATAAA	-16	NA	105014558	105089954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_105015161_105051999_105052158_105063346_105063443_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.23859.8	chr4	+	2227	5	NNC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	196	-22102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.1051155531737	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACTTAGGAGAATTG	NA	False	NA	NA	False	NA	NA	NA	105014739	105067859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066882_105066977
ES.23859.9	chr4	+	2649	6	NNC	ENSMUSG00000028517.9	novel	3159	6	NA	NA	1584	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	83.897556579438	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACCAAGGCACTGGTG	NA	False	NA	3	True	AATAAA	-13	NA	105016127	105089951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_105016245_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ES.2386.1	chr10	-	925	1	Intergenic	novelGene_1819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	17960407	17959482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_17959500_17960400
ES.23860.1	chr4	-	2961	4	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACTTGGATCACATTAA	NA	False	NA	NA	False	AATAAA	-14	NA	105015152	105006188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105007842_105010075_105010846_105011329_105011614_105014898
ES.23860.2	chr4	-	5234	3	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGACTGCTTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	105015248	105008772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105010841_105011329_105011614_105012366
ES.23860.3	chr4	-	4362	2	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTGTGACTTCAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	105015165	105010319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105010846_105011329
ES.23860.4	chr4	-	792	1	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGTAAAAGAAAAAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	105015162	105014370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105014400_105015200
ES.23860.5	chr4	-	2053	6	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105088704	105014392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105015160_105051998_105052157_105065719_105065999_105066393_105066454_105076523_105076702_105088093
ES.23860.6	chr4	-	8253	1	Antisense	novelGene_ENSMUSG00000028517.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCTGAATCTGTGATC	NA	False	NA	NA	False	ATTAAA	-33	NA	105079620	105071367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_105071400_105079600
ES.23861.1	chr4	-	172	1	Intergenic	novelGene_19572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	105091665	105091493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_105091500_105091700
ES.23862.1	chr4	-	174	1	Intergenic	novelGene_19573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTGTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105114779	105114605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_105114600_105114800
ES.23863.1	chr4	-	152	1	Intergenic	novelGene_19574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAATAAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	105158510	105158358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_105158400_105158500
ES.23864.1	chr4	+	3060	2	Intergenic	novelGene_19575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCATTTTGTTTTCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	105289878	105293348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_105289917_105290326
ES.23865.1	chr4	-	166	1	Intergenic	novelGene_19576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	105461947	105461781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_105461800_105461900
ES.23866.1	chr4	-	4582	1	Intergenic	novelGene_19577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAATGTTTTATTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	105593245	105588663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_105588700_105593200
ES.23867.1	chr4	+	581	1	Intergenic	novelGene_19578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGGGTAGGCCAGCC	NA	False	NA	NA	False	AATAAA	-21	NA	105790795	105791376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_105790800_105791400
ES.23868.1	chr4	+	96	1	Intergenic	novelGene_19579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTTAATGGGAAACA	9281	False	NA	NA	False	NA	NA	NA	105803458	105803554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_105803500_105803600
ES.23869.1	chr4	-	173	1	Intergenic	novelGene_19580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	106119195	106119022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106119000_106119200
ES.2387.1	chr10	-	1862	1	Antisense	novelGene_ENSMUSG00000019854.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	17983379	17981517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_17981500_17983400
ES.23870.1	chr4	+	10828	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-223	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_46	50.4949351105634	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGTCTCACAGACTT	NA	False	NA	17	True	AATAAA	-17	NA	106173186	106298524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266096_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.12	chr4	+	10710	69	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	53.0014607750641	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106173392	106298523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227308_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106243012_106243149_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.13	chr4	+	8555	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-36	2056	-15	-2051	multi-exon	FALSE	canonical	3	60	junction_13	48.8076771804264	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACACAGGCCTTTGTA	NA	False	NA	NA	False	AATGAA	-4	NA	106173394	106296463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.14	chr4	+	10550	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_54	51.9678345262804	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106173407	106298523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266570_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273163_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.16	chr4	+	8999	69	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	52.6920342725401	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGGAGTCTCACAGA	NA	False	NA	14	True	AATAAA	-14	NA	106173409	106298521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106221525_106221590_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106297636
ES.23870.18	chr4	+	8945	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	1	-1676	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_41	50.2916377788047	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTGCAATCATTTGC	NA	False	NA	7	True	AATAAA	-15	NA	106173410	106296838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259386_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.2	chr4	+	9185	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-241	1631	-220	-1626	multi-exon	FALSE	canonical	3	60	junction_13	48.8076771804264	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTGTGTATTGAGTT	NA	False	NA	57	True	NA	NA	NA	106173189	106296888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.21	chr4	+	5203	41	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-13	39084	1	-28614	5prime_fragment	FALSE	canonical	3	60	junction_13	59.4625722618859	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTTCCGTCCTGT	NA	False	NA	NA	False	AAAAAG	-15	NA	106173417	106259435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236
ES.23870.22	chr4	+	11011	66	NIC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	2	-1677	intron_retention	FALSE	canonical	3	60	junction_13	49.4430758699263	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATCTGCAATCATTTG	NA	False	NA	6	True	AATAAA	-14	NA	106173418	106296837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.24	chr4	+	9175	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-12	1412	2	-1407	multi-exon	FALSE	canonical	3	60	junction_13	48.8076771804264	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCTGGGCTTACATAG	NA	False	NA	NA	False	NA	NA	NA	106173418	106297107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.25	chr4	+	9977	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	4	7068	intron_retention	FALSE	non_canonical	0	0	junction_54	51.9572326143346	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGGGCCTTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	106173420	106305587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273163_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106303650
ES.23870.26	chr4	+	4428	31	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-6	58276	-6	22163	5prime_fragment	FALSE	canonical	3	60	junction_13	68.4248492873751	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTTCAACCACAATTTA	NA	False	NA	NA	False	NA	NA	NA	106173424	106240243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431
ES.23870.3	chr4	+	8954	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-219	-1859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	51.9305532116918	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTCTCCAGAAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	106173190	106296655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219451_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230999_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.30	chr4	+	8939	69	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	14	-1677	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	51.199477164691	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATCTGCAATCATTTG	NA	False	NA	6	True	AATAAA	-14	NA	106173444	106296837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106221529_106221590_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.34	chr4	+	8084	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	310	2181	310	-2176	multi-exon	FALSE	canonical	3	60	junction_13	48.8076771804264	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGGGAGAAGAAATGGG	NA	False	NA	NA	False	AATAAA	-19	NA	106173740	106296338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.35	chr4	+	8213	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	25105	-1679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.0285006076122	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGATCTGCAATCATT	NA	False	NA	4	True	AATAAA	-12	NA	106198535	106296835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219633_106219884_106219933_106221525_106221590_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.36	chr4	+	5472	48	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	30331	-19957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	28.4071159608188	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATGATCAAAGTAAGTA	NA	False	NA	NA	False	AATATA	-9	NA	106203761	106268092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219698_106219884_106219933_106221525_106221590_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266570_106266807_106266928_106267328_106267550_106267980
ES.23870.37	chr4	+	7736	61	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	39439	1684	39439	-1679	3prime_fragment	FALSE	canonical	3	60	junction_6	22.5133232158698	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGATCTGCAATCATT	NA	False	NA	4	True	AATAAA	-12	NA	106212869	106296835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.38	chr4	+	10878	57	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	43967	7	intron_retention	FALSE	non_canonical	0	0	junction_4	36.2624318935828	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTCTCACAGACTTTT	NA	False	NA	19	True	AATAAA	-19	NA	106217397	106298526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106217435_106217614_106217719_106219099_106219208_106219353_106219449_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227308_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269342_106269440_106270775_106270872_106271571_106271676_106273163_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280650_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.39	chr4	+	9022	58	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	43984	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_52	25.7880176221013	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106217414	106298523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285745_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.40	chr4	+	7337	57	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	44182	1669	44182	-1664	3prime_fragment	FALSE	canonical	3	60	junction_2	22.358968432997	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGCTTTGCTTAAACA	NA	False	NA	19	True	AATAAA	-27	NA	106217612	106296850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.41	chr4	+	8763	55	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	45985	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_28	25.5478249176851	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGGAGTCTCACAGA	NA	False	NA	14	True	AATAAA	-14	NA	106219415	106298521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259386_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.42	chr4	+	6987	54	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	46107	-1677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.272681637813	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATCTGCAATCATTTG	NA	False	NA	6	True	AATAAA	-14	NA	106219537	106296837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106219697_106219884_106219933_106225247_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.43	chr4	+	8387	51	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	51052	-1676	intron_retention	FALSE	canonical	1	3	junction_30	25.0997689232391	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTGCAATCATTTGC	NA	False	NA	7	True	AATAAA	-15	NA	106224482	106296838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266570_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.44	chr4	+	6736	52	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	51791	1752	51791	-1747	3prime_fragment	FALSE	canonical	3	70	junction_1	20.5050607494801	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTTTGACTTCATAAA	NA	False	NA	-64	True	ATTAAA	-17	NA	106225221	106296767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.45	chr4	+	7777	46	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-54504	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.7899311848819	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	15	True	AATAAA	-15	NA	106231185	106298522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106231242_106232843_106232960_106234525_106234593_106234703_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242722_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.46	chr4	+	6356	43	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	61111	3145	-51148	-3140	internal_fragment	FALSE	canonical	3	78	junction_17	19.3057509084881	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTCTCTGTGAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	106234541	106295374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.47	chr4	+	5643	41	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	-49265	-1676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.1809090751257	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTGCAATCATTTGC	NA	False	NA	7	True	AATAAA	-15	NA	106236424	106296838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242722_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.49	chr4	+	3757	28	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	-26453	-1859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.5446930748805	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTCTCCAGAAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	106259236	106296655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282464_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.5	chr4	+	9052	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	-228	1751	-207	-1746	multi-exon	FALSE	canonical	3	60	junction_13	48.8076771804264	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTTTGACTTCATAAAA	NA	False	NA	-63	True	ATTAAA	-18	NA	106173202	106296768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.50	chr4	+	7111	20	NIC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-20795	4	intron_retention	FALSE	canonical	3	93	junction_6	15.2638838302867	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106264894	106298523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106266092_106266480_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.51	chr4	+	3114	23	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	92576	1864	-19683	-1859	3prime_fragment	FALSE	canonical	3	93	junction_9	17.1919162245247	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTCTCCAGAAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	106266006	106296655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.52	chr4	+	5208	22	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	92584	1683	-19675	-1678	intron_retention	FALSE	canonical	3	93	junction_9	17.5406234036238	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGATCTGCAATCATTT	NA	False	NA	5	True	AATAAA	-13	NA	106266014	106296836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.53	chr4	+	3462	22	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	93047	1434	-19212	-1429	3prime_fragment	FALSE	canonical	3	93	junction_8	16.9765744964246	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGACATCTCTCATTC	NA	False	NA	NA	False	ATTAAA	-25	NA	106266477	106297085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.54	chr4	+	5162	20	NIC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-18859	3	intron_retention	FALSE	canonical	3	93	junction_6	15.720727535271	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	15	True	AATAAA	-15	NA	106266830	106298522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106266928_106267328_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.55	chr4	+	6595	17	NNC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	-17707	-1440	intron_retention	FALSE	canonical	0	0	junction_3	34.9936936282811	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTGCCAACATGAC	NA	False	NA	NA	False	ATTAAA	-14	NA	106267982	106297074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106268106_106268496_106268639_106269288_106269440_106270086_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.56	chr4	+	4286	17	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	95122	1864	-17137	-1859	intron_retention	FALSE	canonical	3	93	junction_4	15.1820978046514	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTCTCCAGAAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	106268552	106296655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.57	chr4	+	7075	15	NIC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-16387	3	intron_retention	FALSE	canonical	3	93	junction_3	15.9407384664934	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	15	True	AATAAA	-15	NA	106269302	106298522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.58	chr4	+	3797	14	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	99732	-3	-12527	3	3prime_fragment	FALSE	canonical	3	112	junction_3	12.3690776875334	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	15	True	AATAAA	-15	NA	106273162	106298522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.59	chr4	+	5625	13	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	99826	-4	-12433	4	intron_retention	FALSE	canonical	3	112	junction_3	12.85901110765	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGAGTCTCACAGACT	NA	False	NA	16	True	AATAAA	-16	NA	106273256	106298523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941
ES.23870.6	chr4	+	2987	20	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-204	10382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	88.2731218679918	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCTTTGTATTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	106173205	106228462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219698_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180
ES.23870.60	chr4	+	3541	6	NIC	ENSMUSG00000028514.16	novel	10594	68	NA	NA	-1169	-1672	intron_retention	FALSE	canonical	3	126	junction_3	13.42236938845	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAATCATTTGCTTTG	NA	False	NA	11	True	AATAAA	-19	NA	106284520	106296842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106285751_106287721_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.61	chr4	+	2933	5	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	115348	-2	3089	2	3prime_fragment	FALSE	canonical	3	126	junction_2	14.972892172189	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGGAGTCTCACAGA	NA	False	NA	14	True	AATAAA	-14	NA	106288778	106298521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.62	chr4	+	5431	2	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	119336	-3	7077	3	intron_retention	FALSE	canonical	3	129	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGAGTCTCACAGAC	NA	False	NA	15	True	AATAAA	-15	NA	106292766	106298522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106293617_106293941
ES.23870.7	chr4	+	10855	69	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-200	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_48	52.7127322065381	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAATTGGAGTCTCACAG	NA	False	NA	13	True	AATAAA	-13	NA	106173209	106298520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106221529_106221590_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266809_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.8	chr4	+	9085	68	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-195	-1679	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_41	51.7990057970167	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGATCTGCAATCATT	NA	False	NA	4	True	AATAAA	-12	NA	106173214	106296835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259386_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266570_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23870.9	chr4	+	11570	66	NNC	ENSMUSG00000028514.16	novel	10575	68	NA	NA	-192	2	intron_retention	FALSE	non_canonical	0	0	junction_17	52.6040158657787	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTGGAGTCTCACAGA	NA	False	NA	14	True	AATAAA	-14	NA	106173217	106298521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225918_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266570_106266807_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ES.23871.1	chr4	-	397	2	Intergenic	novelGene_19581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTATGACCGTCCTT	NA	False	NA	NA	False	GATAAA	-21	NA	106173393	106172808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106173071_106173258
ES.23872.1	chr4	-	680	2	Antisense	novelGene_ENSMUSG00000028514.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTCCGCTCCCGGAAGC	NA	False	NA	NA	False	NA	NA	NA	106198511	106173401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106173982_106198411
ES.23872.2	chr4	-	3472	1	Antisense	novelGene_ENSMUSG00000028514.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCATG	NA	False	NA	NA	False	NA	NA	NA	106198511	106195039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106195000_106198500
ES.23873.1	chr4	-	3856	1	Antisense	novelGene_ENSMUSG00000028514.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTAAGGCTTA	NA	False	NA	NA	False	AGTAAA	-29	NA	106216226	106212370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106212400_106216200
ES.23874.1	chr4	-	2439	1	Antisense	novelGene_ENSMUSG00000028514.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	106248638	106246199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106246200_106248600
ES.23875.1	chr4	-	1743	1	Antisense	novelGene_ENSMUSG00000028514.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	106258195	106256452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106256500_106258200
ES.23876.1	chr4	-	4771	12	NNC	ENSMUSG00000044254.7	novel	3521	12	NA	NA	238	1482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	4.15803513673792	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGCAGTAAAAATGACAAT	NA	False	NA	NA	False	TATAAA	-19	NA	106321288	106298043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311850_106314061_106314186_106316033_106316226_106320891
ES.23876.2	chr4	-	3342	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	174	5	174	-5	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGGCTGCCTGCTTA	NA	False	NA	NA	False	AATAAA	-28	NA	106321352	106299530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ES.23876.3	chr4	-	3278	12	NNC	ENSMUSG00000044254.7	novel	3521	12	NA	NA	238	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	4.15803513673792	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCGACTCAGAGGCTGCC	NA	False	NA	NA	False	AATAAA	-22	NA	106321288	106299536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311850_106314061_106314186_106316033_106316226_106320891
ES.23876.5	chr4	-	4308	5	ISM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	14241	13	14241	-13	intron_retention	FALSE	canonical	3	7	junction_1	1.11803398874989	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCGACTCAGAGGCTG	8966	False	NA	NA	False	AATAAA	-20	NA	106307285	106299538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703
ES.23876.6	chr4	-	2992	11	NNC	ENSMUSG00000044254.7	novel	3521	12	NA	NA	220	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.52658811910251	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCCGACTCAGAGGC	NA	False	NA	NA	False	AATAAA	-18	NA	106321306	106299540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306139_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106320891
ES.23877.1	chr4	-	2826	4	FSM	ENSMUSG00000025418.8	ENSMUST00000054472.4	2756	4	-71	1	-71	-1	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCACCTTTATTCGCCTG	NA	False	NA	NA	False	NA	NA	NA	106349551	106340653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106342643_106343780_106344036_106345175_106345268_106349061
ES.23878.1	chr4	+	177	1	Intergenic	novelGene_19582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATAATTCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	106374138	106374315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106374100_106374300
ES.23879.1	chr4	-	178	1	Intergenic	novelGene_19583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGGAAGAAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	106383236	106383058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106383100_106383200
ES.2388.1	chr10	-	4628	20	NIC	ENSMUSG00000071392.7	novel	2900	21	NA	NA	-15	538	intron_retention	FALSE	canonical	0	0	junction_1	1.68585446084705	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCGTGTCGTTCTTG	7710	False	NA	NA	False	NA	NA	NA	18086653	18004112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_18004895_18006340_18006514_18012653_18012743_18014555_18014622_18016007_18016165_18016260_18016335_18017575_18017724_18018640_18018856_18020303_18020391_18035497_18035602_18037174_18037358_18039117_18039211_18041230_18041360_18044040_18044210_18045129_18045254_18048419_18048589_18049639_18051112_18075669_18075783_18076999_18077134_18086506
ES.2388.2	chr10	-	5171	21	NIC	ENSMUSG00000071392.7	novel	2900	21	NA	NA	-45	535	intron_retention	FALSE	canonical	0	0	junction_12	1.59608896995124	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCGTGTCGTTC	7680	False	NA	NA	False	NA	NA	NA	18086683	18004115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_18006514_18012653_18012743_18014555_18014622_18016007_18016165_18016260_18016335_18017575_18017724_18018640_18018856_18020303_18020391_18032848_18032975_18035497_18035602_18037174_18037358_18039117_18039211_18041230_18041360_18044040_18044210_18045129_18045254_18048419_18048589_18049639_18049893_18050948_18051112_18075669_18075783_18076999_18077134_18086506
ES.23880.1	chr4	+	156	1	Intergenic	novelGene_19584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAAAAAGGCCCCCA	NA	False	NA	NA	False	NA	NA	NA	106392788	106392944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106392800_106392900
ES.23881.1	chr4	+	4105	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	-77	0	-77	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418157	106446310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.10	chr4	+	3913	10	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	122.646536190413	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTTTGTCATTTATTC	NA	False	NA	16	True	AATAAA	-16	NA	106418293	106446308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808_106444890_106444943
ES.23881.11	chr4	+	3939	9	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	78	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	128.111035824397	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTAGTCTTTTGTCATTTA	NA	False	NA	13	True	AATAAA	-13	NA	106418312	106446305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106418589_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.12	chr4	+	3611	8	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	8879	-1	intron_retention	FALSE	canonical	2	3	junction_1	134.956531172531	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTGTCATTTATTCA	NA	False	NA	17	True	AATAAA	-17	NA	106427113	106446309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106427214_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.13	chr4	+	3401	6	ISM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	11186	6	11186	-6	3prime_fragment	FALSE	canonical	3	318	junction_3	44.2673694723326	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTAGTCTTTTGTCATTT	NA	False	NA	12	True	AATAAA	-12	NA	106429420	106446304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.2	chr4	+	3886	8	NIC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_5	138.743339608481	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTTTGTCATTTATT	NA	False	NA	15	True	AATAAA	-15	NA	106418229	106446307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106442986_106443185_106443541_106443721_106443808
ES.23881.3	chr4	+	2001	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	10	2017	10	-2017	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCACGCCTGGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	106418244	106444293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.4	chr4	+	3984	9	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	24	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	129.488356136758	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTAGTCTTTTGTCATT	NA	False	NA	11	True	AATAAA	-11	NA	106418258	106446303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106418595_106421597_106421741_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.5	chr4	+	3491	6	NIC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	46	-2	intron_retention	FALSE	canonical	0	0	junction_2	157.593147059128	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTTTGTCATTTATTC	NA	False	NA	16	True	AATAAA	-16	NA	106418280	106446308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106418595_106421597_106421754_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.6	chr4	+	3935	9	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	46	-9	intron_retention	FALSE	canonical	0	0	junction_7	122.962329089034	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGCTAGTCTTTTGTCA	NA	False	NA	9	True	AATAAA	-9	NA	106418280	106446301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443579_106443721_106443808
ES.23881.7	chr4	+	5364	8	NIC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	46	-2	intron_retention	FALSE	canonical	3	318	junction_5	37.2712068109265	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTTTGTCATTTATTC	NA	False	NA	16	True	AATAAA	-16	NA	106418280	106446308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23881.8	chr4	+	4595	10	NNC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	52	-2	intron_retention	FALSE	canonical	0	0	junction_6	161.270036557812	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTTTGTCATTTATTC	NA	False	NA	16	True	AATAAA	-16	NA	106418286	106446308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106439638_106440260_106442986_106443185_106443541_106443721_106443808
ES.23881.9	chr4	+	6059	7	NIC	ENSMUSG00000034926.4	novel	4028	9	NA	NA	57	-3	intron_retention	FALSE	canonical	3	318	junction_4	39.3760361415699	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTTTGTCATTTATT	NA	False	NA	15	True	AATAAA	-15	NA	106418291	106446307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106418595_106421597_106421754_106428608_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ES.23882.1	chr4	-	2084	8	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1419	-401	1419	0	3prime_fragment	FALSE	canonical	1	5	junction_3	4.52656557650139	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGTTCTACCAGTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	106473016	106448105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535
ES.23882.2	chr4	-	1926	7	NIC	ENSMUSG00000054362.10	novel	1569	10	NA	NA	1414	-1	intron_retention	FALSE	canonical	0	0	junction_3	5.82141639885766	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGTTCTACCAGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	106473021	106448106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106448885_106464485_106464620_106467596_106467723_106470305_106470450_106470564_106470700_106472231_106472355_106472535
ES.23882.3	chr4	-	4324	2	NNC	ENSMUSG00000054362.10	novel	1569	10	NA	NA	3379	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCAGAGCCGGTTCTA	2961	False	NA	NA	False	AATAAA	-14	NA	106461213	106448114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106451578_106460352
ES.23882.4	chr4	-	2269	6	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1464	15151	1464	-15151	intron_retention	FALSE	canonical	1	5	junction_2	3.84707681233427	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	106472971	106463657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231
ES.23882.5	chr4	-	3345	3	NIC	ENSMUSG00000054362.10	novel	1569	10	NA	NA	3404	-17531	intron_retention	FALSE	canonical	3	6	junction_1	4	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	106471031	106466037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106468772_106470305_106470450_106470564
ES.23882.6	chr4	-	4354	4	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1458	17581	1458	-17581	intron_retention	FALSE	canonical	1	5	junction_1	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106472977	106466087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106467723_106468609_106468772_106470305_106470450_106470564
ES.23883.1	chr4	+	2308	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	-119	2	-82	0	multi-exon	FALSE	canonical	3	40	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508183	106512477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106508329_106510314
ES.23883.2	chr4	+	4200	1	Genic_Genomic	ENSMUSG00000043572.8	novel	NA	NA	NA	NA	14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508279	106512479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_106508300_106512500
ES.23883.3	chr4	+	2221	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	22	-1741	-7	0	multi-exon	FALSE	canonical	3	39	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508287	106512477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106508346_106510314
ES.23883.4	chr4	+	3044	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	2	0	2	0	multi-exon	FALSE	canonical	3	5	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508296	106512477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106508329_106509465
ES.23883.5	chr4	+	3051	2	FSM	ENSMUSG00000043572.8	ENSMUST00000146966.2	644	2	7	-2414	4	0	multi-exon	TRUE	canonical	2	6	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508306	106512477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106508346_106509465
ES.23883.6	chr4	+	2833	2	NNC	ENSMUSG00000043572.8	novel	502	2	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508339	106512477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106509010_106510314
ES.23884.1	chr4	-	3243	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	45	-1167	2	1167	multi-exon	TRUE	canonical	3	276	junction_4	15.561903466677	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCTGTTTTGTTTT	NA	False	NA	NA	False	AATAGA	-17	NA	106536096	106518285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.10	chr4	-	5301	8	NNC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-14	1	intron_retention	FALSE	canonical	1	1	junction_4	104.184490992015	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536112	106519455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106522936_106524692_106525452_106527645_106527733_106528820_106529275_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.11	chr4	-	2544	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-10	1	intron_retention	FALSE	canonical	3	276	junction_3	16.3893067272536	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536108	106519455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106520429_106522852_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.12	chr4	-	4955	8	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	3	1	intron_retention	FALSE	canonical	3	276	junction_2	17.5208330805568	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536095	106519455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.13	chr4	-	4911	25	Fusion	ENSMUSG00000047502.15_ENSMUSG00000025413.14	novel	4346	24	NA	NA	-33	1	multi-exon	TRUE	canonical	0	0	junction_9	139.367619386044	180	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106565778	106519455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106536938_106538080_106539056_106539120_106541105_106541209_106547411_106547535_106548170_106548327_106548711_106548892_106549473_106549615_106551511_106551627_106552187_106552326_106556918_106557110_106557323_106557463_106560358_106560389_106561327_106561441_106564655_106564792_106564947_106565053_106565667
ES.23884.14	chr4	-	4750	9	NNC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-18	1	intron_retention	FALSE	canonical	0	0	junction_4	99.3295493546608	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTGTGTTGTTTGTGT	NA	False	NA	-2	True	ATTAAA	-38	NA	106536116	106519455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525447_106527645_106527733_106528820_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.15	chr4	-	4506	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	276	junction_3	16.5033140611212	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCTTGTGTTGTTTGTG	NA	False	NA	-3	True	ATTAAA	-37	NA	106536106	106519456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.16	chr4	-	2082	10	NNC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	92.953725378429	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGAGATCTTGTGTTG	NA	False	NA	-9	True	ATTAAA	-31	NA	106536087	106519462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535924
ES.23884.17	chr4	-	9402	6	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	9	-8	intron_retention	FALSE	canonical	3	276	junction_1	19.7220688569937	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATGAGATCTTGTGT	NA	False	NA	-11	True	ATTAAA	-29	NA	106536132	106519464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106525452_106527645_106527733_106528820_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.18	chr4	-	1726	11	NNC	ENSMUSG00000047502.15	novel	4346	24	NA	NA	944	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.98997487421324	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGCGTGCGGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	106564801	106537614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106538080_106539056_106539120_106541105_106541209_106547411_106547535_106548170_106548327_106548711_106548892_106549473_106549615_106551511_106551627_106556918_106557014_106557323_106557463_106564655
ES.23884.19	chr4	-	2603	17	ISM	ENSMUSG00000047502.15	ENSMUST00000106770.8	4346	24	19357	1	-25	-1	3prime_fragment	FALSE	canonical	0	0	junction_8	1.86140907647943	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGCGTGCGGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	106565770	106537614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106538080_106539056_106539120_106541105_106541209_106547411_106547535_106548170_106548327_106548711_106548892_106549473_106549615_106551511_106551627_106552187_106552326_106556918_106557110_106557323_106557463_106559679_106559835_106560211_106560389_106561327_106561441_106564655_106564792_106564947_106565053_106565667
ES.23884.2	chr4	-	2592	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	33	-504	-10	504	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTCCTCCAACAAG	NA	False	NA	NA	False	NA	NA	NA	106536108	106518948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.20	chr4	-	2025	13	NNC	ENSMUSG00000047502.15	novel	4346	24	NA	NA	883	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.93469779437398	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGATGCGTGCGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	106564862	106537615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106538080_106539056_106539120_106541105_106541209_106547411_106547535_106548170_106548327_106548711_106548892_106549473_106549615_106551511_106551627_106556918_106557110_106557323_106557463_106560358_106560389_106561327_106561441_106564655
ES.23884.21	chr4	-	1626	10	NNC	ENSMUSG00000047502.15	novel	4346	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.05480466765633	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACAGATGCGTGCGG	NA	False	NA	NA	False	NA	NA	NA	106565742	106537620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106538080_106539056_106539120_106541105_106541209_106547411_106547535_106548170_106548327_106548711_106548892_106549473_106549615_106556918_106557106_106557323_106557463_106565667
ES.23884.4	chr4	-	5397	8	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	3	451	intron_retention	FALSE	canonical	3	276	junction_2	17.5208330805568	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	106536083	106519001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.5	chr4	-	2096	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	26	-1	-17	1	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGTTTGTGTCCTT	NA	False	NA	2	True	ATTAAA	-42	NA	106536115	106519451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.6	chr4	-	6807	4	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-3323	0	intron_retention	FALSE	canonical	3	276	junction_1	15.556349186104	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	1	True	ATTAAA	-41	NA	106532203	106519452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106525452_106527645_106527733_106528820_106528946_106531607
ES.23884.7	chr4	-	1956	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	98.3475978354327	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTTGTTTGTGTCC	NA	False	NA	0	True	ATTAAA	-40	NA	106536102	106519453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.8	chr4	-	4288	8	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	4	2	intron_retention	FALSE	canonical	3	276	junction_2	17.475347066712	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	-1	True	ATTAAA	-39	NA	106536094	106519454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106520429_106522852_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ES.23884.9	chr4	-	7087	7	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	-19	2	intron_retention	FALSE	canonical	3	276	junction_2	18.8826787176914	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTGTTTGTGTC	NA	False	NA	-1	True	ATTAAA	-39	NA	106536117	106519454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106533957_106535381_106535500_106535949
ES.23885.1	chr4	+	1950	8	FSM	ENSMUSG00000034871.3	ENSMUST00000047620.3	1923	8	-28	1	-28	-1	multi-exon	FALSE	canonical	2	3	junction_2	2.64189171555813	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACTGTGTAAGACCTGG	2085	False	NA	3	True	NA	NA	NA	106591057	106605488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735
ES.23885.2	chr4	+	2842	8	NNC	ENSMUSG00000034871.3	novel	1923	8	NA	NA	5	5098	intron_retention	FALSE	canonical	2	2	junction_7	3.01695886884898	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGCAGAGCTTGGCTTC	2118	False	NA	NA	False	NA	NA	NA	106591090	106610587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106605463_106610058
ES.23885.3	chr4	+	177	1	Intergenic	novelGene_19585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAGAAAAAAAAAAA	5338	False	NA	NA	False	NA	NA	NA	106594310	106594487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106594300_106594500
ES.23885.4	chr4	+	172	1	Intergenic	novelGene_19586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	106609339	106609511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106609300_106609500
ES.23886.1	chr4	+	176	1	Intergenic	novelGene_19588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTGT	8331	False	NA	NA	False	NA	NA	NA	106630866	106631042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106630900_106631000
ES.23887.1	chr4	+	175	1	Intergenic	novelGene_19589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106681092	106681267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106681100_106681300
ES.23888.1	chr4	+	2971	1	Antisense	novelGene_ENSMUSG00000086940.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106703441	106706412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_106703400_106706400
ES.23889.1	chr4	+	192	1	Intergenic	novelGene_19590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	106707109	106707301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106707100_106707300
ES.2389.1	chr10	-	3564	6	NIC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-262	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	20.4782811778723	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18111008	18089423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_18089927_18092007_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.10	chr10	-	2797	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	34	-576	34	576	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAATTCCTACCGTATC	NA	False	NA	NA	False	TATAAA	-23	NA	18110692	18091955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.11	chr10	-	2094	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	23	138	23	-138	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATGGCATTTTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	18110703	18092669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.12	chr10	-	886	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	3	1366	3	-1366	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCAGTTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	18110723	18093897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.3	chr10	-	1290	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	-101	1	-99	-1	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTTTTCTGTTTAGA	NA	False	NA	-1	True	AATAAA	-20	NA	18110845	18089424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.4	chr10	-	3224	5	NIC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	28	-1	intron_retention	FALSE	canonical	3	48	junction_1	9.98436277385793	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTTTTCTGTTTAGA	NA	False	NA	-1	True	AATAAA	-20	NA	18110698	18089424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.5	chr10	-	5360	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	2	-3107	2	-1	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTTTTCTGTTTAGA	NA	False	NA	-1	True	AATAAA	-20	NA	18110724	18089424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.6	chr10	-	1154	6	NNC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.3963501218684	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTTTTCTGTTTAG	NA	False	NA	-2	True	AATAAA	-19	NA	18110734	18089425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_18089903_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.7	chr10	-	6606	5	NNC	ENSMUSG00000059554.13	novel	2255	5	NA	NA	-211	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	30.5563004959697	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGTTTTCTGTTTA	NA	False	NA	-3	True	AATAAA	-18	NA	18110957	18089426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_18094601_18094680_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.8	chr10	-	4262	6	NNC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.5797026815011	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTCTGTTTTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	18110695	18089427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_18089927_18092007_18094601_18094680_18095391_18100644_18100809_18106166_18106367_18110599
ES.2389.9	chr10	-	2230	7	NNC	ENSMUSG00000059554.13	novel	1190	6	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	27.7968823191858	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTCATCTCTGTTTTC	NA	False	NA	-9	True	AATAAA	-12	NA	18110733	18089432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_18089927_18092007_18092031_18093080_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ES.23890.1	chr4	-	5611	17	NNC	ENSMUSG00000034853.17	novel	5689	16	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	6.34305722818264	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTTCTGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	106657050	106601751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106602217_106602301_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ES.23890.10	chr4	-	5448	17	NNC	ENSMUSG00000034853.17	novel	5689	16	NA	NA	1868	-25	intron_retention	FALSE	non_canonical	0	0	junction_1	7.66867614063862	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGGGTACACTAACCA	NA	False	NA	NA	False	NA	NA	NA	106660327	106601776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106602217_106602301_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106660295
ES.23890.12	chr4	-	5568	16	FSM	ENSMUSG00000034853.17	ENSMUST00000065253.13	2939	16	25	-2654	25	-26	multi-exon	FALSE	canonical	0	0	junction_15	6.50606554600312	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTGGGGTACACTAACC	NA	False	NA	NA	False	NA	NA	NA	106662170	106601777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106662102
ES.23890.13	chr4	-	3410	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	-3	2282	-3	398	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGACATTCAACAGAATT	NA	False	NA	NA	False	NA	NA	NA	106657046	106604033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ES.23890.15	chr4	-	2051	9	NNC	ENSMUSG00000034853.17	novel	2620	14	NA	NA	-1408	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.4400459121974	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTGTGGCTTATTGT	2671	False	NA	NA	False	NA	NA	NA	106614565	106604430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106614507
ES.23890.16	chr4	-	2990	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	18	2681	15	-1	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAGTGTGTGGCTTATT	NA	False	NA	NA	False	NA	NA	NA	106657025	106604432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ES.23890.17	chr4	-	1805	9	NNC	ENSMUSG00000034853.17	novel	2620	14	NA	NA	-1359	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.4400459121974	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCAGTGTTTTTTGTTA	2720	False	NA	NA	False	NA	NA	NA	106614516	106604697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106614437
ES.23890.18	chr4	-	2789	16	FSM	ENSMUSG00000034853.17	ENSMUST00000065253.13	2939	16	-123	273	-123	-117	multi-exon	FALSE	canonical	0	0	junction_15	6.50606554600312	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGGACGTCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	106662318	106604704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106662102
ES.23890.19	chr4	-	2717	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	17	2955	14	-119	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCATGGGACGTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	106657026	106604706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ES.23890.2	chr4	-	5686	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	3	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTTCTGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	106657040	106601751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ES.23890.20	chr4	-	244	1	Intergenic	novelGene_19587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGATTCGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	106622308	106622064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106622100_106622300
ES.23890.4	chr4	-	5963	16	NNC	ENSMUSG00000034853.17	novel	5689	16	NA	NA	1872	0	intron_retention	FALSE	non_canonical	0	0	junction_1	7.84573486395988	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTTCTGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	106660323	106601751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106602217_106602301_106605682_106606458_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106660295
ES.23890.8	chr4	-	5967	18	NNC	ENSMUSG00000034853.17	novel	5689	16	NA	NA	-54543	-24	intron_retention	FALSE	non_canonical	0	0	junction_1	9.13338300527834	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGGTACACTAACCAC	NA	False	NA	NA	False	NA	NA	NA	106716738	106601775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106602217_106602301_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106673753_106673882_106716316
ES.23890.9	chr4	-	5495	17	NNC	ENSMUSG00000034853.17	novel	2939	16	NA	NA	14	-25	intron_retention	FALSE	non_canonical	0	0	junction_1	8.10478253872366	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGGGTACACTAACCA	NA	False	NA	NA	False	NA	NA	NA	106662181	106601776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106602217_106602301_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106662102
ES.23891.1	chr4	-	179	1	Intergenic	novelGene_19591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	862	False	NA	NA	False	NA	NA	NA	106737158	106736979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106737000_106737200
ES.23892.1	chr4	+	205	1	Intergenic	novelGene_19592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8057	False	NA	NA	False	NA	NA	NA	106741947	106742152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106741900_106742200
ES.23893.1	chr4	+	194	1	Intergenic	novelGene_19593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	106752193	106752387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106752200_106752400
ES.23894.1	chr4	-	157	1	Intergenic	novelGene_19594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAATCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	106763726	106763569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106763600_106763700
ES.23895.1	chr4	+	1802	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-48	1441	-48	-197	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAAATATATTTCAAGT	NA	False	NA	NA	False	AATAAA	-40	NA	106768618	106905450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.11	chr4	+	2020	16	NIC	ENSMUSG00000061887.15	novel	1924	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	59.140360349107	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGCTGGTTTATTTCA	NA	False	NA	12	True	AATAAA	-12	NA	106768668	106905889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.12	chr4	+	3110	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-61	-1125	2	-2	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTTCCTGACATACTT	NA	False	NA	14	True	ATTAAA	-18	NA	106768668	106906889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.13	chr4	+	1944	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-42	22	-20	2	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106768687	106905742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.14	chr4	+	1044	10	ISM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-36	10917	-14	287	5prime_fragment	FALSE	canonical	3	47	junction_5	52.9159594586746	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATACAGGTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	106768693	106894847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798
ES.23895.17	chr4	+	1840	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	209	-125	75	0	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGCTGGTTTATTTCA	NA	False	NA	12	True	AATAAA	-12	NA	106768938	106905889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.18	chr4	+	1453	15	NNC	ENSMUSG00000061887.15	novel	888	7	NA	NA	-6430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4813331459758	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	106806625	106905695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106806743_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.19	chr4	+	4891	1	Intergenic	novelGene_19596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATGACTTTTCTAGA	NA	False	NA	NA	False	NA	NA	NA	106816607	106821498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106816600_106821500
ES.23895.2	chr4	+	3239	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-45	1	-45	-1	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCCTGACATACTTG	NA	False	NA	15	True	ATTAAA	-19	NA	106768621	106906890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.20	chr4	+	172	1	Intergenic	novelGene_19597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	1095	False	NA	NA	False	NA	NA	NA	106868307	106868479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106868300_106868500
ES.23895.21	chr4	+	3342	9	NIC	ENSMUSG00000061887.15	novel	1719	14	NA	NA	27	-1	intron_retention	FALSE	canonical	3	121	junction_4	47.5629517061336	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCCTGACATACTTG	NA	False	NA	15	True	ATTAAA	-19	NA	106888055	106906890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106888126_106888211_106888289_106894132_106894198_106894798_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.22	chr4	+	4698	2	NNC	ENSMUSG00000061887.15	novel	846	3	NA	NA	-3251	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	106900899	106905695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106902502_106902599
ES.23895.3	chr4	+	2191	17	NNC	ENSMUSG00000061887.15	novel	1924	17	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	64.0580486258362	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTGGTTTATTTCAAA	NA	False	NA	14	True	AATAAA	-14	NA	106768631	106905891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895376_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.5	chr4	+	1937	16	NIC	ENSMUSG00000061887.15	novel	1924	17	NA	NA	-32	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	59.3698763871226	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106768634	106905742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.7	chr4	+	2221	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-26	1000	-26	2	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTGGTTTATTTCAAA	NA	False	NA	14	True	AATAAA	-14	NA	106768640	106905891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.8	chr4	+	2094	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	-26	1127	-26	0	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAACCCCACAAGCC	NA	False	NA	NA	False	NA	NA	NA	106768640	106905764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23895.9	chr4	+	2058	18	NNC	ENSMUSG00000061887.15	novel	3195	18	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.6652149547971	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	106768644	106905695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_106769110_106770104_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895376_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ES.23896.1	chr4	-	181	1	Intergenic	novelGene_19595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	106782768	106782587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106782600_106782800
ES.23897.1	chr4	-	2590	5	Antisense	novelGene_ENSMUSG00000061887.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATTGTCAGTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106895420	106885770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106888124_106888209_106888286_106894129_106894198_106894798_106894848_106895376
ES.23897.2	chr4	-	9077	1	Antisense	novelGene_ENSMUSG00000061887.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATTGTCAGTTGACTT	NA	False	NA	NA	False	NA	NA	NA	106894847	106885770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_106885800_106894800
ES.23898.1	chr4	+	434	1	Intergenic	novelGene_19598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAATTAAAAAAA	6927	False	NA	NA	False	NA	NA	NA	106918450	106918884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_106918400_106918900
ES.23899.1	chr4	-	2467	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	14	-983	14	983	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTGATGGGTATGT	NA	False	NA	NA	False	NA	NA	NA	106924051	106912087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.10	chr4	-	5034	3	NIC	ENSMUSG00000028622.12	novel	1047	5	NA	NA	1345	2	intron_retention	FALSE	canonical	3	549	junction_2	31	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106920622	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106917838_106919079
ES.23899.11	chr4	-	1353	6	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	244.566064694184	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106924045	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921783_106921968_106923646
ES.23899.13	chr4	-	4930	2	NIC	ENSMUSG00000028622.12	novel	1047	5	NA	NA	-2104	2	intron_retention	FALSE	canonical	3	549	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106919251	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106917838_106919079
ES.23899.14	chr4	-	1390	7	NNC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	224.277172266818	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106924041	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106913302_106914643_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.15	chr4	-	6050	5	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	-23	2	intron_retention	FALSE	canonical	3	549	junction_2	30.8575355464431	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106924040	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106917838_106919079_106919266_106921581_106921698_106921783
ES.23899.16	chr4	-	3789	6	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	549	junction_3	37.7444035586734	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106924051	106913081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106921698_106921783_106921968_106923646
ES.23899.17	chr4	-	5615	5	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	602	junction_2	23.1408729308123	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106924044	106913081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.18	chr4	-	3875	5	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	549	junction_3	40.2639727299729	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106924051	106913081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106921968_106923646
ES.23899.2	chr4	-	3289	1	Genic_Genomic	ENSMUSG00000028622.12	novel	NA	NA	NA	NA	1760	972	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTACTGAGT	NA	False	NA	NA	False	NA	NA	NA	106915387	106912098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_106912100_106915400
ES.23899.20	chr4	-	3307	7	NNC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_2	283.375732121781	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106924051	106913081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106913302_106914568_106914773_106914982_106915138_106917679_106917838_106919079_106919266_106921581_106921698_106921783
ES.23899.21	chr4	-	1076	5	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	25	4571	-23	3951	5prime_fragment	FALSE	canonical	3	549	junction_1	41.8598853319022	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGCCTCCTGCTATAAA	NA	False	NA	NA	False	AAGAAA	-19	NA	106924040	106917641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.3	chr4	-	1496	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	2	0	2	0	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	False	NA	-8	True	AATAAA	-23	NA	106924063	106913070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.5	chr4	-	1457	7	NNC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	225.288272121643	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	False	NA	-8	True	AATAAA	-23	NA	106924041	106913070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919249_106921581_106921698_106921783_106921968_106923646
ES.23899.6	chr4	-	3162	6	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	12	3	12	-3	intron_retention	FALSE	canonical	3	549	junction_3	27.6086942827798	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATTGTCTGTGAGATA	NA	False	NA	-11	True	AATAAA	-20	NA	106924053	106913073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783
ES.23899.7	chr4	-	4383	6	NIC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	14	3	intron_retention	FALSE	canonical	3	549	junction_2	37.4411538283745	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGAGATTGTCTGTG	NA	False	NA	-16	True	AATAAA	-15	NA	106924051	106913078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106913302_106914568_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ES.23899.9	chr4	-	2373	7	NNC	ENSMUSG00000028622.12	novel	1498	7	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	229.708813259067	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTGAGATTGTCTGT	NA	False	NA	-17	True	AATAAA	-14	NA	106924041	106913079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106920174_106921581_106921698_106921783_106921968_106923646
ES.239.1	chr1	+	174	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	34568103	34568277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34568100_34568300
ES.2390.1	chr10	+	3056	2	NNC	ENSMUSG00000096977.3	novel	380	2	NA	NA	-37	5269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATGTCCTCAGTTGTC	5306	False	NA	NA	False	NA	NA	NA	18111076	18127036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18111346_18124249
ES.2390.2	chr10	+	6005	1	Genic_Genomic	ENSMUSG00000096977.3	novel	NA	NA	NA	NA	353	3663	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGCTGTG	5696	False	NA	NA	False	NA	NA	NA	18111466	18117471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_18111500_18117500
ES.23900.1	chr4	+	1345	6	NIC	ENSMUSG00000028621.18	novel	5471	9	NA	NA	2	-38	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	4.42718872423573	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTCTGTATCCATGA	933	False	NA	-32	True	NA	NA	NA	106924186	106941963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106924239_106925808_106926021_106928066_106928216_106931069_106931158_106938087_106938292_106941323
ES.23900.2	chr4	+	2580	7	NIC	ENSMUSG00000028621.18	novel	5471	9	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.20949986936259	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGTTTTGTCTGGCC	937	False	NA	22	True	ATTAAA	-22	NA	106924190	106943029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106924239_106925740_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ES.23900.3	chr4	+	3027	6	NIC	ENSMUSG00000028621.18	novel	2516	7	NA	NA	-2	-27	intron_retention	FALSE	canonical	3	9	junction_5	2.78567765543682	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGACAAGTCTTTCC	937	False	NA	-21	True	NA	NA	NA	106924190	106941974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ES.23900.4	chr4	+	2299	6	NIC	ENSMUSG00000028621.18	novel	5471	9	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.93963561409139	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGTTTTGTCTGGCC	938	False	NA	22	True	ATTAAA	-22	NA	106924191	106943029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106924239_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ES.23900.5	chr4	+	1856	7	NIC	ENSMUSG00000028621.18	novel	2516	7	NA	NA	-2	-2046	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	5.87130498460285	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGCTTGAGAAAGAGCA	965	False	NA	NA	False	NA	NA	NA	106924218	106939490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_106924243_106925808_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106938416
ES.23901.1	chr4	-	177	1	Intergenic	novelGene_19599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	106931358	106931181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106931200_106931400
ES.23902.1	chr4	-	238	1	Intergenic	novelGene_19600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGCAGAGGGACAGCA	NA	False	NA	NA	False	AAGAAA	-18	NA	106955652	106955414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_106955400_106955700
ES.23903.1	chr4	+	3005	1	Intergenic	novelGene_19601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGAGCTCATGAATGAGT	7038	False	NA	NA	False	NA	NA	NA	107016751	107019756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107016800_107019800
ES.23904.1	chr4	+	1792	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	-19	2	-19	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	NA	False	NA	13	True	ATTAAA	-25	NA	107035576	107058191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.10	chr4	+	3228	7	NIC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1513	junction_4	120.411447407074	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	NA	False	NA	13	True	ATTAAA	-25	NA	107035914	107058191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.11	chr4	+	1401	8	NNC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	-7	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	565.36201153034	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTATGTTCTGAAGCT	NA	False	NA	-2	True	ATTAAA	-10	NA	107035915	107058176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107036115_107042974_107043081_107044815_107044911_107047768_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.12	chr4	+	1330	7	FSM	ENSMUSG00000028618.12	ENSMUST00000154007.8	852	7	-5	-473	-5	-15	multi-exon	FALSE	canonical	0	0	junction_1	632.858506215164	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTATGTTCTGAAGCT	NA	False	NA	-2	True	ATTAAA	-10	NA	107035917	107058176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107036115_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.13	chr4	+	4482	5	ISM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	8581	-298	8090	0	3prime_fragment	FALSE	canonical	3	1513	junction_2	69.5089922240281	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	8162	False	NA	15	True	ATTAAA	-27	NA	107044304	107058193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.2	chr4	+	1440	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	-7	342	-7	-44	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGTGACTTTACCTG	NA	False	NA	19	True	AATAAA	-25	NA	107035588	107057851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.4	chr4	+	1482	8	NNC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	588.218097827876	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTTCTGAAGCTTGAG	NA	False	NA	2	True	ATTAAA	-14	NA	107035869	107058180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107036115_107042980_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.7	chr4	+	1444	8	NNC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	588.558737727257	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTTGAGTGTTGGGCT	NA	False	NA	11	True	ATTAAA	-23	NA	107035910	107058189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047873_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.8	chr4	+	1500	8	NNC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	588.218097827876	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTTCTGAAGCTTGAG	NA	False	NA	2	True	ATTAAA	-14	NA	107035910	107058180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107036115_107042921_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ES.23904.9	chr4	+	7351	6	NIC	ENSMUSG00000028618.12	novel	1775	8	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	1513	junction_4	131.902084896335	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTTGAGTGTTGGGCT	NA	False	NA	11	True	ATTAAA	-23	NA	107035914	107058189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107049741_107050495_107054812_107057564
ES.23905.1	chr4	-	6078	1	NIC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	32774	453	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCATAGTTTCCCCCA	NA	False	NA	NA	False	AATAAA	-18	NA	107002091	106996013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_106996000_107002100
ES.23905.2	chr4	-	1839	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	-75	4667	-75	448	multi-exon	FALSE	canonical	3	63	junction_1	11	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGGCATAGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	107035819	106996018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ES.23905.3	chr4	-	1972	6	NNC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	-57	448	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	29.9492904757358	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGGCATAGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	107035801	106996018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106996997_107004711_107004906_107022744_107022887_107033670_107033822_107034761_107034902_107035434
ES.23905.4	chr4	-	1647	5	NNC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	14	448	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	30.0031248372565	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGGCATAGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	107036286	106996018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107036093
ES.23905.5	chr4	-	1954	5	NNC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	27	402	intron_retention	FALSE	non_canonical	0	0	junction_2	32.6534837345114	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTACTTGCTCTTTAA	NA	False	NA	NA	False	AATACA	-30	NA	107035378	106996064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_106996997_107004711_107004906_107007349_107007419_107022744_107022887_107034761
ES.23905.6	chr4	-	341	3	NIC	ENSMUSG00000028619.16	novel	541	3	NA	NA	-36	-13	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	107035516	107030217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107030337_107034761_107034902_107035434
ES.23906.1	chr4	+	196	1	Intergenic	novelGene_19602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACTGGGGTGCCCAGAG	9605	False	NA	NA	False	NA	NA	NA	107078300	107078496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107078300_107078500
ES.23907.1	chr4	+	1711	1	Antisense	novelGene_ENSMUSG00000028617.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTGGGCGGTGGTGGT	NA	False	NA	NA	False	CATAAA	-40	NA	107094793	107096504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_107094800_107096500
ES.23908.1	chr4	+	616	6	NNC	ENSMUSG00000063172.14	novel	365	3	NA	NA	-336	-44	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	154.293227330301	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAAGCTATCTTTGA	NA	False	NA	-46	True	AATATA	-8	NA	107110453	107137081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107110577_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ES.23908.2	chr4	+	688	6	NNC	ENSMUSG00000063172.14	novel	581	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.089135660755	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTTTTTTATATAA	NA	False	NA	8	True	ATTAAA	-19	NA	107110777	107137135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107110919_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ES.23908.3	chr4	+	653	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	-41	-4	-14	0	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTCCATTTTTTTT	NA	False	NA	2	True	ATTAAA	-13	NA	107111080	107137129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ES.23908.4	chr4	+	631	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	-19	-5	-14	5	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTTATATAAAGGAA	NA	False	NA	13	True	ATTAAA	-24	NA	107111080	107137140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ES.23908.5	chr4	+	1479	1	NIC	ENSMUSG00000063172.14	novel	1502	3	NA	NA	0	-9403	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCTTATGAGTTG	NA	False	NA	NA	False	TTTAAA	-28	NA	107111094	107112573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107111100_107112600
ES.23908.7	chr4	+	964	1	NIC	ENSMUSG00000063172.14	novel	1502	3	NA	NA	-5	-9896	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATTAAAGTGCTTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	107111116	107112080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107111100_107112100
ES.23908.8	chr4	+	3110	1	NIC	ENSMUSG00000063172.14	novel	607	6	NA	NA	14354	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTGATTCCATTTTTT	6070	False	NA	0	True	ATTAAA	-11	NA	107134017	107137127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107134000_107137100
ES.23909.1	chr4	-	2041	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	-288	2	-288	1	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107111017	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ES.23909.10	chr4	-	172	1	Intergenic	novelGene_19603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAATTGGGAC	NA	False	NA	NA	False	NA	NA	NA	107098974	107098802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_107098800_107099000
ES.23909.11	chr4	-	4311	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	87	10127	87	3772	5prime_fragment	FALSE	canonical	3	195	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAGACAGTGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	107110642	107100837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_107104978_107110471
ES.23909.2	chr4	-	1522	8	NNC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	70.5725852999475	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107110393	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110366
ES.23909.3	chr4	-	4505	6	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	164	1	intron_retention	FALSE	canonical	3	195	junction_5	9.04654630231891	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107110565	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107093082_107096274_107096389_107096908_107098218_107100404_107100537_107104490_107104978_107110471
ES.23909.4	chr4	-	2686	1	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	-221	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107093398	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107090700_107093400
ES.23909.5	chr4	-	1552	7	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	87	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	75.1886516259823	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107110642	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107091182_107092996_107093082_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ES.23909.6	chr4	-	3488	7	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	80	1	intron_retention	FALSE	canonical	3	194	junction_3	9.88966913276453	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	False	NA	-7	True	AATAAA	-18	NA	107110649	107090712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ES.23909.7	chr4	-	2668	7	NIC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	184	-1	intron_retention	FALSE	canonical	3	195	junction_6	8.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTGCTTTTGAATTG	NA	False	NA	-9	True	AATAAA	-16	NA	107110545	107090714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107098218_107100404_107100537_107104490_107104978_107110471
ES.23909.8	chr4	-	1571	8	NNC	ENSMUSG00000028617.11	novel	1755	8	NA	NA	298	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.7018261895421	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTTTTGCTCTCGTTG	NA	False	NA	-27	True	AATACA	-18	NA	107110059	107090732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107109963
ES.23909.9	chr4	-	2889	2	NNC	ENSMUSG00000028617.11	novel	407	2	NA	NA	-96	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTCTTTTGCTCTC	NA	False	NA	-31	True	AATACA	-14	NA	107097046	107090736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107093185_107096605
ES.2391.1	chr10	+	6667	8	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-1296	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1153506651011	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTATGTGCATTTAAT	NA	False	NA	24	True	AATAAA	-28	NA	18193436	18409642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18193489_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.10	chr10	+	7842	7	NIC	ENSMUSG00000039835.17	novel	1159	5	NA	NA	-63	1109	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.1757956618859	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTTGCATCTTATAGA	NA	False	NA	NA	False	AATAAA	-21	NA	18266006	18410749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_18266259_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
ES.2391.11	chr10	+	7447	8	NIC	ENSMUSG00000039835.17	novel	7321	7	NA	NA	-5	-8	intron_retention	FALSE	canonical	2	6	junction_1	9.66584561373558	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18283417	18409629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_18284263_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.12	chr10	+	6741	8	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	23536	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1153506651011	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	18306958	18409631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18307096_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.13	chr10	+	6318	5	ISM	ENSMUSG00000039835.17	ENSMUST00000037341.14	7321	7	90357	11	28051	-8	3prime_fragment	FALSE	canonical	2	10	junction_2	8.61684396980704	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18373779	18409629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
ES.2391.14	chr10	+	6362	5	NNC	ENSMUSG00000039835.17	novel	6795	8	NA	NA	41606	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0764389584379	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18387334	18409629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18387491_18391701_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.15	chr10	+	1431	2	ISM	ENSMUSG00000039835.17	ENSMUST00000100054.4	6795	8	56780	5205	56780	2725	internal_fragment	FALSE	canonical	3	19	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGCGGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	18402508	18404432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_18402791_18403283
ES.2391.16	chr10	+	93	1	ISM	ENSMUSG00000039835.17	ENSMUST00000037341.14	7321	7	125086	1039	62780	880	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTATAGGTGAAGCTTT	663	False	NA	NA	False	AATAAA	-36	NA	18408508	18408601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_18408500_18408600
ES.2391.2	chr10	+	5998	9	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-701	-695	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.1732288239399	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGTTTGTATGATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	18194031	18408942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18194083_18217862_18217895_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.3	chr10	+	3536	9	NNC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-689	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6381816969859	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTTGTATGTGCATT	NA	False	NA	20	True	AATAAA	-24	NA	18194043	18409638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18194083_18348666_18348820_18373780_18373906_18387297_18387365_18391776_18391909_18399538_18399730_18402717_18402791_18403283_18403417_18407015
ES.2391.4	chr10	+	7566	8	NIC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-670	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	8.8456146173787	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	18194062	18409631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.5	chr10	+	7367	7	FSM	ENSMUSG00000039835.17	ENSMUST00000207038.2	4854	7	-603	-1910	-603	-6	multi-exon	FALSE	canonical	2	10	junction_1	9.68532681717842	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	18194129	18409631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
ES.2391.6	chr10	+	185	1	Intergenic	novelGene_1820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	18232817	18233002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_18232800_18233000
ES.2391.7	chr10	+	3087	1	Intergenic	novelGene_1822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGATTTCCTGTGAAGTT	7318	False	NA	NA	False	NA	NA	NA	18258928	18262015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_18258900_18262000
ES.2391.8	chr10	+	7359	10	NNC	ENSMUSG00000039835.17	novel	1159	5	NA	NA	-230	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7496769977314	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	False	NA	11	True	AATAAA	-15	NA	18265839	18409629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_18266259_18348666_18348820_18356730_18356834_18373780_18373906_18384342_18384578_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.2391.9	chr10	+	6910	8	NIC	ENSMUSG00000039835.17	novel	1159	5	NA	NA	-117	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.1153506651011	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAACTTCTTTGTAT	NA	False	NA	13	True	AATAAA	-17	NA	18265952	18409631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_18266259_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ES.23910.1	chr4	+	1400	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	-79	0	-79	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171480	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.10	chr4	+	3813	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	192.378896971575	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171586	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107192845_107192905_107193310_107193392_107193633_107193722_107198182_107198300_107199267_107201876_107202205_107202389_107207610_107207755_107216803
ES.23910.11	chr4	+	5665	26	Fusion	ENSMUSG00000028614.15_ENSMUSG00000057375.14	novel	4584	18	NA	NA	-6	7	multi-exon	FALSE	canonical	0	0	junction_8	180.769360235633	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTGTTTCATTAGC	NA	False	NA	29	True	AATAAA	-40	NA	107171602	107273550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_107171660_107172959_107173040_107176138_107176303_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803_107216955_107224950_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.12	chr4	+	1298	10	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.763721966532	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171604	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107171682_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.13	chr4	+	974	6	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	368	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.010277411024	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTCCTTCAGCTC	NA	False	NA	27	True	AGTAAA	-17	NA	107176535	107217018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107176703_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.14	chr4	+	1075	8	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	2274	-7	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	124.64774857369	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTGTGTGTCCTT	-1	True	NA	21	True	AGTAAA	-11	NA	107178441	107217012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107178547_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.15	chr4	+	1091	8	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	2284	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	165.889316431537	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	9	True	NA	28	True	AGTAAA	-18	NA	107178451	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107178547_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207755_107216803
ES.23910.16	chr4	+	1180	9	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	2287	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.296311179146	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	12	True	NA	28	True	AGTAAA	-18	NA	107178454	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107178547_107192205_107192317_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.17	chr4	+	134	1	Intergenic	novelGene_19605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107222843	107222977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107222800_107223000
ES.23910.18	chr4	+	4685	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-1112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.232237498954	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107223868	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107223940_107224950_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.19	chr4	+	177	1	Intergenic	novelGene_19606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107224457	107224634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107224500_107224600
ES.23910.2	chr4	+	1138	8	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	134.15601639395	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171573	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.20	chr4	+	4632	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	-50	2	-50	-2	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGAATCTCTGTGTGT	NA	False	NA	20	True	AATAAA	-31	NA	107224930	107273541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.21	chr4	+	2593	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	-12	2003	-12	10	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTCTATGGCAGCCGAAC	NA	False	NA	21	True	AATAAA	-22	NA	107224968	107271540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.22	chr4	+	2915	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	-10	1679	-10	334	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGATTTACAGATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	107224970	107271864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.23	chr4	+	7353	16	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	10	-3	intron_retention	FALSE	canonical	3	529	junction_9	47.8760436497791	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107224990	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.24	chr4	+	4638	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	149.470136814375	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107224997	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243946_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.25	chr4	+	5937	1	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	41	-12849	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	107225021	107230958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225000_107231000
ES.23910.26	chr4	+	4513	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-38	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	234.69657950014	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGTTCATCAAACACT	NA	False	NA	6	True	AATAAA	-17	NA	107225038	107273527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107238925_107240781_107240918_107241005_107241118_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.28	chr4	+	4634	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	194.718957018114	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107225039	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241005_107241118_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.29	chr4	+	3099	8	ISM	ENSMUSG00000028614.15	ENSMUST00000149366.2	4320	17	-72	30644	-37	-931	intron_retention	FALSE	canonical	3	558	junction_7	32.5551337686374	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTATAACAGGATATG	NA	False	NA	NA	False	ACTAAA	-44	NA	107225039	107242876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781
ES.23910.3	chr4	+	4591	8	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	9	junction_7	138.359189453113	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171573	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107201876_107202205_107202389_107216803
ES.23910.30	chr4	+	2460	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-29	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	150.368981009472	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGCGTCTATGGCAGC	NA	False	NA	16	True	AATAAA	-17	NA	107225047	107271535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246696_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.31	chr4	+	2917	3	ISM	ENSMUSG00000028614.15	ENSMUST00000149366.2	4320	17	-64	42564	-29	-12851	5prime_fragment	FALSE	canonical	3	607	junction_1	6.5	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	107225047	107230956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107225346_107225953_107226075_107228458
ES.23910.32	chr4	+	4402	17	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	204.175322945747	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225050	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247421_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.33	chr4	+	3837	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	73	674	-23	-651	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTAAAGAGAGCATTCAT	NA	False	NA	NA	False	CATAAA	-22	NA	107225053	107272869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.36	chr4	+	4483	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	195.027316858402	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGAATCTCTGTGTGT	NA	False	NA	20	True	AATAAA	-31	NA	107225205	107273541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107227548_107227675_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.37	chr4	+	4202	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	154.550949831277	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225206	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.38	chr4	+	2234	17	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-40	5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	198.722128548886	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGCGTCTATGGCAGC	NA	False	NA	16	True	AATAAA	-17	NA	107225208	107271535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232279_107232414_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.39	chr4	+	4282	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	146.232237498954	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225210	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222_107271828_107271899
ES.23910.4	chr4	+	1181	9	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	129.727599222371	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171574	107217019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107216803
ES.23910.40	chr4	+	4111	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	152.290429771539	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225213	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.41	chr4	+	4211	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_7	153.432191863377	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225217	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.43	chr4	+	4285	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	25	junction_13	149.194085003394	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225228	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.44	chr4	+	4315	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	149.40331147926	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107225228	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252946_107253030_107268262_107268424_107271222
ES.23910.47	chr4	+	2395	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	145.564525698635	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGACTGTTCATCAAACA	NA	False	NA	4	True	AATAAA	-15	NA	107225230	107273525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107273143
ES.23910.48	chr4	+	4164	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	146.232237498954	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107225230	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222_107271596_107271762
ES.23910.49	chr4	+	3266	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	259	1059	-9	954	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGTCGGCTTCATTA	NA	False	NA	NA	False	NA	NA	NA	107225239	107272484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.5	chr4	+	1290	10	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	124.992542987448	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTAGTGTGTGTCCTTCAG	NA	False	NA	24	True	AGTAAA	-14	NA	107171574	107217015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201720_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.50	chr4	+	2435	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	227.191854803135	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGAGCGTCTATGGCAG	NA	False	NA	15	True	AATAAA	-16	NA	107225243	107271534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107227548_107227675_107228458_107228561_107231343_107231519_107232274_107232414_107237797_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.51	chr4	+	2073	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	-5	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	152.290429771539	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGCGTCTATGGCAGC	NA	False	NA	16	True	AATAAA	-17	NA	107225243	107271535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.52	chr4	+	2153	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	1	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	154.550949831277	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGTCTATGGCAGCCG	NA	False	NA	18	True	AATAAA	-19	NA	107225249	107271537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.53	chr4	+	5100	2	ISM	ENSMUSG00000028614.15	ENSMUST00000149366.2	4320	17	138	42563	1	-12850	intron_retention	FALSE	canonical	3	607	junction_1	0	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107225249	107230957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107225346_107225953
ES.23910.55	chr4	+	4153	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	146.232237498954	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGACTGTTCATCAAAC	NA	False	NA	3	True	AATAAA	-14	NA	107225249	107273524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222_107271606_107271748
ES.23910.59	chr4	+	4199	17	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	16	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	205.764494856984	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGTTCATCAAACACT	NA	False	NA	6	True	AATAAA	-17	NA	107225264	107273527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107238925_107240781_107240918_107241982_107242076_107243768_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.6	chr4	+	1398	11	NNC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.184887554579	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTGTGTCCTTCAGCT	NA	False	NA	26	True	AGTAAA	-16	NA	107171574	107217017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107197527_107197622_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23910.60	chr4	+	4314	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	22	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	236.365340933191	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGTTCATCAAACACT	NA	False	NA	6	True	AATAAA	-17	NA	107225270	107273527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107245930_107246076_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.61	chr4	+	4659	17	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	23	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	205.91821798957	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGTTCATCAAACACTG	NA	False	NA	7	True	AATAAA	-18	NA	107225271	107273528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107239415_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.62	chr4	+	4386	19	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	195.791626764556	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225271	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107227729_107227823_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.63	chr4	+	2988	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	26	2791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	145.564525698635	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATAATGCTTTTAGTCC	NA	False	NA	NA	False	NA	NA	NA	107225274	107276334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107275315
ES.23910.64	chr4	+	2387	15	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	26	326	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	163.384999811076	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAAAGAGTCTCGATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	107225274	107271856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107268262_107268424_107271222
ES.23910.66	chr4	+	2186	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	70	4	combination_of_known_splicesites	FALSE	canonical	2	25	junction_13	149.194085003394	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGAGCGTCTATGGCAG	NA	False	NA	15	True	AATAAA	-16	NA	107225318	107271534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.67	chr4	+	2470	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	92	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	149.341739032666	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGCGTCTATGGCAGC	NA	False	NA	16	True	AATAAA	-17	NA	107225340	107271535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225600_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.68	chr4	+	4474	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	93	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	149.341739032666	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107225341	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225600_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.69	chr4	+	4130	15	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	126	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	220.377655910235	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTGTTCATCAAACAC	NA	False	NA	5	True	AATAAA	-16	NA	107225374	107273526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107225600_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.7	chr4	+	5043	8	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	322	junction_7	36.5541253709161	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTGTGTCCTTCAGCT	NA	False	NA	26	True	AGTAAA	-16	NA	107171574	107217017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107202389_107207610_107207736_107216803
ES.23910.71	chr4	+	4168	17	NNC	ENSMUSG00000028614.15	novel	804	6	NA	NA	1698	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	153.66032700001	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107226946	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107227020_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.74	chr4	+	1290	9	ISM	ENSMUSG00000028614.15	ENSMUST00000030357.15	2354	17	18714	-9	5132	9	3prime_fragment	FALSE	canonical	3	529	junction_2	57.9584980826798	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGTCTATGGCAGCCGAA	NA	False	NA	20	True	AATAAA	-21	NA	107243790	107271539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ES.23910.75	chr4	+	3920	3	NIC	ENSMUSG00000028614.15	novel	4320	17	NA	NA	12930	-3	intron_retention	FALSE	canonical	3	631	junction_1	47.5	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGAATCTCTGTGTG	NA	False	NA	19	True	AATAAA	-30	NA	107251588	107273540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107253030_107268262_107268424_107271222
ES.23910.76	chr4	+	1341	3	NIC	ENSMUSG00000028614.15	novel	4320	17	NA	NA	13504	5	intron_retention	FALSE	canonical	3	631	junction_1	47.5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGCGTCTATGGCAGC	NA	False	NA	16	True	AATAAA	-17	NA	107252162	107271535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107253030_107268262_107268424_107271222
ES.23910.77	chr4	+	6003	1	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	28882	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	732	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	5146	False	NA	22	True	AATAAA	-33	NA	107267540	107273543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107267500_107273500
ES.23910.9	chr4	+	1468	12	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	171.075644184255	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTCCTTCAGCTC	NA	False	NA	27	True	AGTAAA	-17	NA	107171581	107217018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107192205_107192317_107192845_107192905_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ES.23911.1	chr4	-	366	1	Intergenic	novelGene_19604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107222445	107222079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_107222100_107222400
ES.23912.1	chr4	-	3975	2	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTAGGCCAGGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	107239432	107234488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107237903_107238871
ES.23912.2	chr4	-	4944	1	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTAGGCCAGGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	107239432	107234488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107234500_107239400
ES.23912.3	chr4	-	4652	1	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGATATGTACAAT	NA	False	NA	NA	False	NA	NA	NA	107239436	107234784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107234800_107239400
ES.23912.4	chr4	-	3679	2	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGATATGTACAAT	NA	False	NA	NA	False	NA	NA	NA	107239432	107234784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107237903_107238871
ES.23912.5	chr4	-	3387	2	Antisense	novelGene_ENSMUSG00000028614.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGATATGTACAAT	NA	False	NA	NA	False	NA	NA	NA	107241916	107234784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107236038_107239782
ES.23913.1	chr4	-	1773	4	FSM	ENSMUSG00000028610.17	ENSMUST00000069271.5	1861	4	88	0	88	0	multi-exon	FALSE	canonical	3	6	junction_2	4.18993502999218	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGAAAGCTTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	107541339	107533488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107534267_107536449_107536673_107537842_107538052_107540776
ES.23914.1	chr4	-	158	1	Intergenic	novelGene_19607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATGGATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	107592699	107592541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_107592500_107592700
ES.23915.10	chr4	+	1466	5	ISM	ENSMUSG00000028613.16	ENSMUST00000106731.4	7391	19	-1	28662	-1	-117	5prime_fragment	FALSE	canonical	3	11	junction_4	37.2659361884282	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTGCGTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	107659359	107705375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637
ES.23915.12	chr4	+	4704	19	FSM	ENSMUSG00000028613.16	ENSMUST00000030356.10	4555	19	-150	1	0	0	multi-exon	FALSE	canonical	2	4	junction_5	28.291090513961	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	8	True	AATAAA	-17	NA	107659360	107731095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.13	chr4	+	4745	20	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	30.378133993561	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGAATTTTCTTCATA	NA	False	NA	11	True	AATAAA	-20	NA	107659361	107731098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.14	chr4	+	4332	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	296	-10	1	9	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTTCATATGTAACA	NA	False	NA	18	True	AATAAA	-27	NA	107659361	107731105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.15	chr4	+	830	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	-125	32	2	-32	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAGGAGACATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	107659362	107700646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
ES.23915.16	chr4	+	4406	19	NIC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	28.069633431658	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTTCATATGGATAA	NA	False	NA	4	True	AATAAA	-15	NA	107659365	107730940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.17	chr4	+	7423	19	NNC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.7503623165576	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	8	True	AATAAA	-17	NA	107659367	107731095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107692925_107692962_107695092_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.18	chr4	+	4261	18	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	26.5350848245035	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	8	True	AATAAA	-17	NA	107659368	107731095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.19	chr4	+	4200	19	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	29.0516780926679	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCATATGGATAAGAC	NA	False	NA	7	True	AATAAA	-18	NA	107659373	107730943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.22	chr4	+	4015	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	22	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	25.8910413224583	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCATATGGATAAGACT	NA	False	NA	8	True	AATAAA	-19	NA	107659382	107730944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.23	chr4	+	3991	14	ISM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	317	10806	22	-985	5prime_fragment	FALSE	canonical	3	45	junction_4	17.5829395526917	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	107659382	107720289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329
ES.23915.25	chr4	+	4499	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-85	-1081	28	0	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	8	True	AATAAA	-17	NA	107659388	107731095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.26	chr4	+	3270	17	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	32	-2	intron_retention	FALSE	canonical	3	11	junction_4	26.3815157828355	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATAAGTATAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-24	NA	107659392	107730004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.27	chr4	+	3961	17	NIC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTCATATGGATAAGA	NA	False	NA	6	True	AATAAA	-17	NA	107659392	107730942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.28	chr4	+	4447	20	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	32	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	30.9621339641212	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTATTTGTATAGAATT	NA	False	NA	2	True	AATAAA	-11	NA	107659392	107731089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.29	chr4	+	4181	18	NNC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.1559073229982	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTATAGAATTTTCT	NA	False	NA	6	True	AATAAA	-15	NA	107659395	107731093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727313_107727386_107729469
ES.23915.3	chr4	+	4212	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-15	11	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.8239842283367	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCATATGTAACATC	NA	False	NA	20	True	AATAAA	-29	NA	107659345	107731107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.30	chr4	+	4337	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-76	-928	37	0	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTCATATGGATAAGA	NA	False	NA	6	True	AATAAA	-17	NA	107659397	107730942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.33	chr4	+	3107	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	340	1171	45	46	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGAGTTGAGAGCTT	NA	False	NA	NA	False	AATACA	-13	NA	107659405	107729924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.34	chr4	+	2962	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-47	44	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.8239842283367	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGTTTGAGTTGAGAGC	NA	False	NA	NA	False	AATACA	-11	NA	107659410	107729922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.35	chr4	+	4811	21	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	-45	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	33.2690171180334	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGTATAGAATTTTC	NA	False	NA	5	True	AATAAA	-14	NA	107659412	107731092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107705477_107705601_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.37	chr4	+	4170	18	NNC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	33.5952913161341	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTTCATATGGATAAG	NA	False	NA	5	True	AATAAA	-16	NA	107659420	107730941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718451_107727224_107727386_107729469
ES.23915.4	chr4	+	7104	17	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	-15	-2	intron_retention	TRUE	canonical	3	11	junction_4	21.0887262536171	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTCCTTGTGGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	107659345	107734035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.40	chr4	+	2962	4	NNC	ENSMUSG00000028613.16	novel	737	4	NA	NA	-34	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.7442059655397	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCAGCATTGTCTGTT	NA	False	NA	NA	False	AATAAA	-10	NA	107659423	107694411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107692925_107692962
ES.23915.41	chr4	+	4296	19	FSM	ENSMUSG00000028613.16	ENSMUST00000106732.10	2531	19	-213	-1552	-34	-3	multi-exon	FALSE	canonical	3	14	junction_18	26.8477646953299	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGTATAGAATTTTC	NA	False	NA	5	True	AATAAA	-14	NA	107659423	107731092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.42	chr4	+	7402	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-50	-4019	-34	-4	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTGTTTCCTTGTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	107659423	107734033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.43	chr4	+	4504	19	NIC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	-31	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	28.069633431658	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGAATTTTCTTCATAT	NA	False	NA	12	True	AATAAA	-21	NA	107659426	107731099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.44	chr4	+	1833	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	-60	-1036	-30	25	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCTGTGATAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	107659427	107701714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
ES.23915.45	chr4	+	4089	19	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	28.6937856222098	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCATATGGATAAGAC	NA	False	NA	7	True	AATAAA	-18	NA	107659427	107730943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.46	chr4	+	4186	17	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	-13	9	intron_retention	FALSE	canonical	3	11	junction_4	26.5946863818696	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTTCATATGTAACA	NA	False	NA	18	True	AATAAA	-27	NA	107659444	107731105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.47	chr4	+	3397	19	NNC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	34.7275107083707	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGAAAGAACGCTTC	NA	False	NA	NA	False	AATAAA	-33	NA	107659447	107730013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107707300_107707340_107708504_107708622_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717134_107717282_107718320_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.48	chr4	+	4047	17	NNC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	23.7005241239514	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGTATAGAATTTTC	NA	False	NA	5	True	AATAAA	-14	NA	107659447	107731092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726183_107726348_107729469
ES.23915.49	chr4	+	3269	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-25	89	-9	47	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGAGTTGAGAGCTTT	NA	False	NA	NA	False	AATACA	-14	NA	107659448	107729925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.5	chr4	+	4511	19	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	30.7418562939043	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTCATATGGATAAGA	NA	False	NA	6	True	AATAAA	-17	NA	107659346	107730942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.50	chr4	+	3551	19	FSM	ENSMUSG00000028613.16	ENSMUST00000030356.10	4555	19	-57	1061	-4	-10	multi-exon	FALSE	canonical	2	4	junction_5	28.291090513961	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTTCCCCATTTAGATT	NA	False	NA	NA	False	TATAAA	-18	NA	107659453	107730035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.51	chr4	+	4456	19	FSM	ENSMUSG00000028613.16	ENSMUST00000030356.10	4555	19	-56	155	-3	-1	multi-exon	FALSE	canonical	2	4	junction_5	28.291090513961	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTTCATATGGATAAG	NA	False	NA	5	True	AATAAA	-16	NA	107659454	107730941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.52	chr4	+	3217	17	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	-3	212	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	21.0887262536171	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGAGGGGTGTCTAGTT	NA	False	NA	NA	False	CATAAA	-22	NA	107659454	107730257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.53	chr4	+	898	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	-29	-132	1	132	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCATGTCTGACATCTGC	NA	False	NA	NA	False	NA	NA	NA	107659458	107700810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
ES.23915.54	chr4	+	4012	18	NNC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	30.1491104036502	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTCATATGGATAAGAC	NA	False	NA	7	True	AATAAA	-18	NA	107659463	107730943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717280_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.55	chr4	+	3101	5	ISM	ENSMUSG00000028613.16	ENSMUST00000106731.4	7391	19	117	26909	4	952	intron_retention	FALSE	canonical	3	11	junction_4	37.2659361884282	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGGCCAA	NA	False	NA	NA	False	AATAAA	-16	NA	107659477	107707128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637
ES.23915.56	chr4	+	4026	17	NNC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	23.7005241239514	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATAGAATTTTCTT	NA	False	NA	7	True	AATAAA	-16	NA	107659485	107731094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721281_107726174_107726348_107729469
ES.23915.57	chr4	+	1951	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	-1	-1213	-1	202	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCCCTATTGGGCTCG	NA	False	NA	NA	False	ATTAAA	-13	NA	107659486	107701891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
ES.23915.58	chr4	+	7174	19	FSM	ENSMUSG00000028613.16	ENSMUST00000106732.10	2531	19	-150	-4493	-1	-4	multi-exon	FALSE	canonical	3	14	junction_18	26.8477646953299	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTGTTTCCTTGTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	107659486	107734033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.59	chr4	+	3353	19	NIC	ENSMUSG00000028613.16	novel	3497	20	NA	NA	-1	46	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	30.7418562939043	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGAGTTGAGAGCTT	NA	False	NA	NA	False	AATACA	-13	NA	107659486	107729924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.6	chr4	+	4183	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	281	154	-14	-1	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATGTTCATATGGATAAG	NA	False	NA	5	True	AATAAA	-16	NA	107659346	107730941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.60	chr4	+	7131	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	421	-2934	-1	-8	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTTTTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-11	NA	107659486	107734029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ES.23915.64	chr4	+	5117	15	NIC	ENSMUSG00000028613.16	novel	3129	17	NA	NA	-2331	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	24.4126932524196	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATAAGTATAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-24	NA	107701066	107730004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107703817_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.7	chr4	+	4169	17	NIC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	-13	9	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTTCATATGTAACA	NA	False	NA	18	True	AATAAA	-27	NA	107659347	107731105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23915.9	chr4	+	2986	17	NIC	ENSMUSG00000028613.16	novel	4618	18	NA	NA	-9	48	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGTTGAGAGCTTTT	NA	False	NA	NA	False	AATACA	-15	NA	107659351	107729926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ES.23916.1	chr4	-	3171	4	NIC	ENSMUSG00000073779.8	novel	3078	3	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	1.63299316185545	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCCACCTGTGTCCCT	4050	False	NA	NA	False	NA	NA	NA	107680179	107663237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107666035_107667959_107668144_107673123_107673265_107680130
ES.23916.2	chr4	-	3016	3	NIC	ENSMUSG00000073779.8	novel	3078	3	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCCCACCTGTGTCCCT	4021	False	NA	NA	False	NA	NA	NA	107680208	107663237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107666035_107673123_107673265_107680130
ES.23917.1	chr4	+	716	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	-28	4	-28	-4	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCTGAATATGTGAAT	NA	False	NA	46	True	AATAAA	-31	NA	107736923	107744617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
ES.23917.2	chr4	+	2810	4	ISM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	29	30	29	7	intron_retention	FALSE	canonical	3	977	junction_1	32.0138858761146	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATCTTTTTTTGTTAT	NA	False	NA	20	True	AATAAA	-22	NA	107736980	107744591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113
ES.23917.3	chr4	+	3754	3	NIC	ENSMUSG00000028609.7	novel	692	5	NA	NA	29	4	intron_retention	FALSE	canonical	3	1009	junction_2	23	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATAACATCTTTTTTTGT	NA	False	NA	17	True	AATAAA	-19	NA	107736980	107744588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107738149_107740264_107740376_107742113
ES.23917.4	chr4	+	6359	1	NIC	ENSMUSG00000028609.7	novel	692	5	NA	NA	1271	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGCGATAACATCTT	NA	False	NA	10	True	AATAAA	-12	NA	107738222	107744581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107738200_107744600
ES.23918.1	chr4	-	183	1	Intergenic	novelGene_19608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTTTATGCCCAAG	NA	False	NA	NA	False	NA	NA	NA	107745450	107745267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_107745300_107745400
ES.23919.1	chr4	+	1031	9	NNC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	-1052	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	246.538029520802	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTTGCTTTCTAATCC	NA	False	NA	71	True	NA	NA	NA	107745957	107754372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107746094_107746902_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.10	chr4	+	890	8	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	20	junction_7	254.737319686018	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107747058	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107753858
ES.23919.11	chr4	+	756	9	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	309.122952884447	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107747070	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107753858_107753946_107754067
ES.23919.12	chr4	+	5750	6	NIC	ENSMUSG00000028608.16	novel	835	7	NA	NA	5	-198	intron_retention	FALSE	canonical	3	475	junction_1	116.350161151586	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGTAGGCAGTGTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	107747070	107756383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107750609_107752069
ES.23919.13	chr4	+	923	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	-17	645	13	-7	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGATTGGACTCTGGAG	NA	False	NA	53	True	NA	NA	NA	107747078	107754354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.14	chr4	+	775	8	NIC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107747081	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.15	chr4	+	3496	6	ISM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	-14	1	-13	-1	intron_retention	FALSE	canonical	3	677	junction_4	48.5246329197862	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTGTGTATTTATG	NA	False	NA	22	True	NA	NA	NA	107747081	107754998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
ES.23919.16	chr4	+	3387	7	NIC	ENSMUSG00000028608.16	novel	835	7	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	15	junction_1	271.812844108262	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATACTTGTGTGTATT	NA	False	NA	18	True	NA	NA	NA	107747081	107754994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
ES.23919.17	chr4	+	1428	8	NIC	ENSMUSG00000028608.16	novel	1551	7	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	253.100609180118	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATACTTGTGTGTATT	NA	False	NA	18	True	NA	NA	NA	107747108	107754994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747211_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.18	chr4	+	2590	6	ISM	ENSMUSG00000028608.16	ENSMUST00000106727.10	926	9	255	-10	-1	10	intron_retention	FALSE	canonical	3	677	junction_4	48.5246329197862	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGTCTGAGAAATACT	NA	False	NA	24	True	AATAAA	-29	NA	107747314	107754325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
ES.23919.2	chr4	+	1593	8	NIC	ENSMUSG00000028608.16	novel	926	9	NA	NA	10	-9	intron_retention	FALSE	canonical	3	20	junction_7	254.737319686018	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATACTTGTGTG	NA	False	NA	14	True	NA	NA	NA	107747031	107754990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107753858
ES.23919.20	chr4	+	1768	7	NNC	ENSMUSG00000028608.16	novel	868	7	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	316.340226479164	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATACTTGTGTGTATT	NA	False	NA	18	True	NA	NA	NA	107747425	107754994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107747957_107748661_107748719_107749156_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.21	chr4	+	1494	7	NNC	ENSMUSG00000028608.16	novel	825	7	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	265.260040128341	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACTTGTGTGTATTT	NA	False	NA	19	True	NA	NA	NA	107747456	107754995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107747708_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.22	chr4	+	2646	2	ISM	ENSMUSG00000028608.16	ENSMUST00000156888.2	487	3	-163	-64	-163	-1	intron_retention	FALSE	canonical	3	743	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107750207	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_107750609_107752069
ES.23919.3	chr4	+	2640	7	FSM	ENSMUSG00000028608.16	ENSMUST00000120473.8	835	7	-34	-1771	10	-1	multi-exon	FALSE	canonical	3	475	junction_1	106.405931330082	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107747031	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
ES.23919.4	chr4	+	1389	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	22	1586	10	-4	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACTTGTGTGTATTT	NA	False	NA	19	True	NA	NA	NA	107747031	107754995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.23919.5	chr4	+	2649	6	NIC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	475	junction_1	116.318528188763	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACTTGTGTGTATTT	NA	False	NA	19	True	NA	NA	NA	107747036	107754995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107750609_107752069_107752136_107754067
ES.23919.6	chr4	+	3227	6	NIC	ENSMUSG00000028608.16	novel	835	7	NA	NA	-9	-9	intron_retention	FALSE	canonical	3	30	junction_1	283.909422175454	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATACTTGTGTG	NA	False	NA	14	True	NA	NA	NA	107747036	107754990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069
ES.23919.7	chr4	+	3974	7	NNC	ENSMUSG00000028608.16	novel	926	9	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	303.637622101668	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747047	107754315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749156_107749234_107749418_107749451_107750530_107750609_107750715
ES.23919.8	chr4	+	2143	7	NIC	ENSMUSG00000028608.16	novel	2997	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	475	junction_1	103.947770004406	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCGTGAAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	107747057	107754314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107752136_107754067
ES.23919.9	chr4	+	2546	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	49	402	-1	-402	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTAGGTGGGTGTCT	NA	False	NA	NA	False	AGTAAA	-26	NA	107747058	107756179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ES.2392.1	chr10	-	179	1	Intergenic	novelGene_1821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	18257612	18257433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18257400_18257600
ES.23920.1	chr4	-	2368	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	4	0	4	0	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTCCTTTTTCCTTA	NA	False	NA	0	True	AATAAA	-18	NA	107780803	107761177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
ES.23920.2	chr4	-	1025	4	FSM	ENSMUSG00000028607.17	ENSMUST00000106720.9	1015	4	-10	0	-10	0	multi-exon	FALSE	canonical	1	5	junction_1	68.2169741014328	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTCCTTTTTCCT	NA	False	NA	-2	True	AATAAA	-16	NA	107780767	107761179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107761761_107769837_107769945_107771460_107771542_107780511
ES.23920.3	chr4	-	2260	4	NIC	ENSMUSG00000028607.17	novel	2372	5	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	69.2836360349413	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTCCTTTTTCCT	NA	False	NA	-2	True	AATAAA	-16	NA	107780778	107761179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107761761_107764117_107765423_107769837_107769945_107780511
ES.23920.5	chr4	-	2454	5	NNC	ENSMUSG00000028607.17	novel	2372	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	63.0257883726971	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTCCTTTTTCCT	NA	False	NA	-2	True	AATAAA	-16	NA	107780784	107761179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107761761_107764117_107765423_107769837_107770052_107771460_107771542_107780511
ES.23920.6	chr4	-	3855	4	NIC	ENSMUSG00000028607.17	novel	2372	5	NA	NA	7	-2	intron_retention	FALSE	canonical	3	130	junction_2	12.657891697365	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATCTGGTTCCTTTTTC	NA	False	NA	-4	True	AATAAA	-14	NA	107780778	107761181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107761761_107764117_107765423_107769837_107771542_107780511
ES.23921.1	chr4	+	179	1	Intergenic	novelGene_19609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACATCT	5641	False	NA	NA	False	NA	NA	NA	107789351	107789530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107789400_107789500
ES.23922.1	chr4	-	197	1	Intergenic	novelGene_19610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAGTTAAAGTGGTT	970	False	NA	NA	False	NA	NA	NA	107802715	107802518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_107802500_107802700
ES.23923.1	chr4	+	174	2	Intergenic	novelGene_19611	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATACTTTTA	1516	False	NA	NA	False	NA	NA	NA	107824650	107824896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107824756_107824827
ES.23924.1	chr4	+	3037	11	NNC	ENSMUSG00000008932.11	novel	3007	11	NA	NA	-72	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	1.32664991614216	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGACTTATGGATGTGA	2322	False	NA	NA	False	AATAAA	-14	NA	107825456	107870715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107825908_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866903_107867071_107867566_107867702_107868089_107868193_107869427
ES.23924.2	chr4	+	3022	11	FSM	ENSMUSG00000008932.11	ENSMUST00000106713.5	3007	11	-10	-5	-10	5	multi-exon	FALSE	canonical	0	0	junction_7	1.32664991614216	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTATGTGTTTTGCTT	2384	False	NA	NA	False	AATAAA	-33	NA	107825518	107870734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_107825908_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866875_107867071_107867566_107867702_107868089_107868193_107869427
ES.23924.3	chr4	+	2598	10	NIC	ENSMUSG00000008932.11	novel	3007	11	NA	NA	196	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.36986977843755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAGACTTATGGATGT	2592	False	NA	NA	False	AATAAA	-12	NA	107825726	107870713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_107825908_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107867566_107867702_107868089_107868193_107869427
ES.23924.4	chr4	+	2769	11	NNC	ENSMUSG00000008932.11	novel	1887	3	NA	NA	1704	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.9	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATGTGACAGACTATGT	4100	False	NA	NA	False	AATAAA	-24	NA	107827234	107870725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_107827408_107834800_107834881_107850135_107850352_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866903_107867071_107867566_107867702_107868089_107868193_107869427
ES.23925.1	chr4	-	161	1	Antisense	novelGene_ENSMUSG00000008932.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	107870373	107870212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_107870200_107870400
ES.23926.1	chr4	+	138	1	Intergenic	novelGene_19612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	107928842	107928980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107928800_107929000
ES.23927.1	chr4	+	176	1	Intergenic	novelGene_19613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	107942102	107942278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107942100_107942300
ES.23928.1	chr4	+	190	1	Intergenic	novelGene_19614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGACTG	6556	False	NA	NA	False	NA	NA	NA	107975179	107975369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_107975200_107975400
ES.23929.1	chr4	-	3836	19	NNC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	27	11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	198.489636511504	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	108002164	107901024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575_107976535_107976780_107976927_107995325_107995373_108001977
ES.23929.10	chr4	-	2211	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	22	407	-6	22	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAAATGTTCATTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	107975707	107901442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.11	chr4	-	2040	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	-11	611	-11	-72	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGCCCTTGTTTTGC	NA	False	NA	NA	False	AATAAA	-31	NA	107975740	107901646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.12	chr4	-	4951	15	NIC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	-5	-72	intron_retention	FALSE	canonical	3	305	junction_6	134.544204100893	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGCCCTTGTTTTGC	NA	False	NA	NA	False	AATAAA	-31	NA	107975706	107901646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.14	chr4	-	1900	15	NNC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	-5	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.516594092887	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGAGTAAACAAAGCC	NA	False	NA	NA	False	AATAAA	-21	NA	107975706	107901656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107902043_107912651_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.15	chr4	-	1867	15	NIC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	-6	-82	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	157.92739225508	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGAGTAAACAAAGCC	NA	False	NA	NA	False	AATAAA	-21	NA	107975707	107901656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107902043_107904786_107904867_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.16	chr4	-	1383	9	NNC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	12	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	222.197230799576	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACTGAGTAAACAAAGC	NA	False	NA	NA	False	AATAAA	-20	NA	107975689	107901657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944370_107975575
ES.23929.18	chr4	-	3898	8	FSM	ENSMUSG00000028603.16	ENSMUST00000123792.8	855	8	-115	-2928	-6	-1064	multi-exon	FALSE	canonical	3	321	junction_1	40.7536150894266	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAATTATCTAGCTAAAC	NA	False	NA	NA	False	NA	NA	NA	107975707	107945272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.19	chr4	-	3746	9	NNC	ENSMUSG00000028603.16	novel	855	8	NA	NA	1	-1097	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	123.124682740708	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107975672	107945305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107948350_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.2	chr4	-	5582	15	NIC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	5	2	intron_retention	FALSE	canonical	3	305	junction_6	134.544204100893	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGCTTTTACTGTGTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	107975724	107901033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.20	chr4	-	937	9	NNC	ENSMUSG00000028603.16	novel	855	8	NA	NA	-16	13	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	123.124682740708	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCCAGTGCAGCCTGAG	NA	False	NA	NA	False	ATTAAA	-14	NA	107975745	107948187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107948350_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.21	chr4	-	944	8	FSM	ENSMUSG00000028603.16	ENSMUST00000123792.8	855	8	-82	-7	-1	7	multi-exon	FALSE	canonical	3	321	junction_1	40.7536150894266	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGATGCCAGTGCAG	NA	False	NA	NA	False	ATTAAA	-8	NA	107975674	107948193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.22	chr4	-	790	7	ISM	ENSMUSG00000028603.16	ENSMUST00000123792.8	855	8	-114	1679	-5	-1370	5prime_fragment	FALSE	canonical	3	322	junction_3	40.5205709074621	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCACATGTTGTTTACTT	NA	False	NA	NA	False	TATAAA	-17	NA	107975706	107949879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.3	chr4	-	6062	4	ISM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	2690	-712	2634	1	3prime_fragment	FALSE	canonical	3	566	junction_3	56.7861485458088	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGCTTTTACTGTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	107925926	107901034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082
ES.23929.4	chr4	-	2633	16	NNC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.396621766062	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGGCTTTTACTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	107975695	107901035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948548_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.5	chr4	-	2485	15	NIC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	157.92739225508	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGGCTTTTACTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	107975706	107901037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_107902043_107904786_107904867_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.7	chr4	-	2497	16	NNC	ENSMUSG00000028603.16	novel	2640	16	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.775217671649	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCCTTGGCTTTTACT	NA	False	NA	NA	False	ATTAAA	-12	NA	107975686	107901039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107931030_107931089_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.23929.8	chr4	-	2490	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	1	149	1	-149	multi-exon	FALSE	canonical	3	305	junction_7	132.795314509043	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTCCTTTTTCATAC	NA	False	NA	NA	False	TATAAA	-10	NA	107975728	107901184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ES.2393.1	chr10	-	945	1	Intergenic	novelGene_1823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	18326047	18325102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18325100_18326000
ES.23930.1	chr4	-	5461	3	Intergenic	novelGene_19615	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	108009075	108003298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108007154_108007361_108007447_108007554
ES.23930.2	chr4	-	5456	3	Intergenic	novelGene_19616	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	108011213	108003298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108004124_108005829_108007603_108008355
ES.23930.3	chr4	-	5896	3	Intergenic	novelGene_19617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	108011657	108003300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108004134_108005841_108007603_108008355
ES.23931.1	chr4	+	3848	7	NIC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-250	0	intron_retention	FALSE	canonical	3	90	junction_3	267.416497870519	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022383	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108031049_108031183_108031372_108034269_108034321_108035567
ES.23931.11	chr4	+	4098	8	NIC	ENSMUSG00000028601.19	novel	1238	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	745	junction_1	34.3612263685541	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022685	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108022859_108026911_108026980_108027057_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.12	chr4	+	1634	11	NNC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_6	350.071935464698	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108022689	108036500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030633_108030744_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.13	chr4	+	1601	11	NNC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-12	-5	intron_retention	FALSE	canonical	0	0	junction_6	350.071935464698	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTAGCTTGTGCTGGAA	NA	False	NA	17	True	AATAAA	-10	NA	108022702	108036498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030633_108030726_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.14	chr4	+	2354	8	NIC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	90	junction_3	246.722350765688	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022702	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108030170_108030991_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.15	chr4	+	2153	10	NNC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-10	-6	intron_retention	FALSE	canonical	2	6	junction_7	358.212985819717	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTAGCTTGTGCTGGA	NA	False	NA	16	True	AATAAA	-9	NA	108022704	108036497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108032455_108032615_108034269_108034321_108035567
ES.23931.16	chr4	+	2065	9	NNC	ENSMUSG00000028601.19	novel	556	7	NA	NA	-1339	-3	intron_retention	FALSE	canonical	0	0	junction_1	262.70013204222	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTTGTGCTGGAATT	NA	False	NA	19	True	AATAAA	-12	NA	108025572	108036500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108026073_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567
ES.23931.17	chr4	+	1130	10	NNC	ENSMUSG00000028601.19	novel	556	7	NA	NA	-894	-5	intron_retention	FALSE	canonical	0	0	junction_1	249.828434958033	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTAGCTTGTGCTGGAA	NA	False	NA	17	True	AATAAA	-10	NA	108026017	108036498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108026073_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.18	chr4	+	3603	5	NIC	ENSMUSG00000028601.19	novel	1238	11	NA	NA	-430	0	intron_retention	FALSE	canonical	3	713	junction_1	55.2330290677598	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108026481	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108027146_108029285_108031049_108031183_108031372_108034269_108034321_108035567
ES.23931.19	chr4	+	5669	2	NIC	ENSMUSG00000028601.19	novel	1307	10	NA	NA	233	0	intron_retention	FALSE	canonical	3	854	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108029589	108036505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108034321_108035567
ES.23931.2	chr4	+	1802	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	-247	-236	-218	0	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022415	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.20	chr4	+	3707	1	NIC	ENSMUSG00000028601.19	novel	1307	10	NA	NA	1790	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTGCTGGAATTGTT	NA	False	NA	22	True	AATAAA	-15	NA	108032796	108036503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108032800_108036500
ES.23931.3	chr4	+	1521	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	-214	0	-214	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022419	108036505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.4	chr4	+	1723	11	NNC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-10	-6	intron_retention	FALSE	canonical	2	8	junction_9	345.92317066077	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTAGCTTGTGCTGGA	NA	False	NA	16	True	AATAAA	-9	NA	108022652	108036497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108035858_108036024_108036103
ES.23931.5	chr4	+	1693	10	NIC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_4	314.240884248586	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022653	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108029947_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.6	chr4	+	1770	9	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	-5	0	-5	0	intron_retention	FALSE	canonical	3	713	junction_3	46.4677307386535	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022657	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567
ES.23931.7	chr4	+	1695	10	NNC	ENSMUSG00000028601.19	novel	1319	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_1	313.776912180109	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTTGTGCTGGAATTG	NA	False	NA	20	True	AATAAA	-13	NA	108022674	108036501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022859_108026756_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23931.8	chr4	+	1202	11	NNC	ENSMUSG00000028601.19	novel	1238	11	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_1	237.455280000256	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGCTGGAATTGTTG	NA	False	NA	23	True	AATAAA	-16	NA	108022674	108036504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108022725_108022787_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ES.23932.1	chr4	+	178	1	Intergenic	novelGene_19619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATATAAGATT	NA	False	NA	NA	False	NA	NA	NA	108054586	108054764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108054600_108054800
ES.23933.1	chr4	+	177	1	Intergenic	novelGene_19621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTGTATATGTT	NA	False	NA	NA	False	NA	NA	NA	108073398	108073575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108073400_108073600
ES.23934.1	chr4	-	1514	2	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAGAGACCCAAA	2972	False	NA	NA	False	NA	NA	NA	108029111	108026396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108026483_108027683
ES.23934.2	chr4	-	2715	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAGAGACCCAAA	2972	False	NA	NA	False	NA	NA	NA	108029111	108026396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108026400_108029100
ES.23934.3	chr4	-	1562	2	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAAGAGACCCAAA	2972	False	NA	NA	False	NA	NA	NA	108029111	108026396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108026507_108027659
ES.23934.4	chr4	-	1357	1	Intergenic	novelGene_19618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAAATTTTGTTTGTTTG	2972	False	NA	NA	False	NA	NA	NA	108029111	108027754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108027800_108029100
ES.23935.1	chr4	-	9082	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-154	-6645	-28	6645	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTATGTGTTTGTA	5515	False	NA	1	True	ATTAAA	-26	NA	108075273	108032289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.10	chr4	-	2452	13	NIC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	4	109	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	23.8692910568277	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACTGGTTACTTTTCT	5547	False	NA	-5	True	NA	NA	NA	108075241	108038825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108039111_108040844_108040943_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.11	chr4	-	3882	13	ISM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-63	198	63	-2	5prime_fragment	FALSE	canonical	1	26	junction_7	15.5051514736949	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGTTTTCTTTT	5606	False	NA	NA	False	TTTAAA	-17	NA	108075182	108039132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.12	chr4	-	2150	11	NNC	ENSMUSG00000034645.15	novel	2421	14	NA	NA	50	-5178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.7800336416919	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAGTTTCTTAGTTTC	5593	False	NA	NA	False	AATGAA	-30	NA	108075195	108044308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051180_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.14	chr4	-	1787	9	ISM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	93	7588	-33	-7588	5prime_fragment	FALSE	canonical	1	26	junction_3	18.3354165483089	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGACCTGAGTGTTCT	5636	False	NA	NA	False	TATAAA	-17	NA	108075152	108046718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.15	chr4	-	3148	5	NNC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	-20	-17356	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.3494752582406	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCTTTAGATCTCTGA	5523	False	NA	NA	False	NA	NA	NA	108075265	108056486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108057669_108057718_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.16	chr4	-	206	1	Intergenic	novelGene_19620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCCCAAAGGATAAAT	8296	False	NA	NA	False	AAGAAA	-6	NA	108063351	108063145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108063100_108063400
ES.23935.2	chr4	-	3089	7	NNC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	28314	6637	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9243299252402	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTATGAGTGTCTATG	5092	False	NA	-7	True	ATTAAA	-18	NA	108046805	108032297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108033079_108037242_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765
ES.23935.3	chr4	-	1888	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAGATGTTACT	NA	False	NA	NA	False	ATTAAA	-16	NA	108035410	108033522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108033500_108035400
ES.23935.4	chr4	-	5968	13	NIC	ENSMUSG00000034645.15	novel	2421	14	NA	NA	-22	1803	intron_retention	FALSE	canonical	1	26	junction_7	15.5051514736949	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCAGATCTGCTATTGA	5521	False	NA	NA	False	NA	NA	NA	108075267	108037131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.5	chr4	-	3920	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-141	-1496	-15	1496	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCATCCCTTTTCTTTCC	5528	False	NA	0	True	NA	NA	NA	108075260	108037438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.6	chr4	-	3094	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-44	-767	-44	767	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGTGTGTGTGTGTGTG	5625	False	NA	NA	False	AGTAAA	-16	NA	108075163	108038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.7	chr4	-	2633	14	NNC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	5	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.5600705235982	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGAAATGATTGGGT	5548	False	NA	NA	False	NA	NA	NA	108075240	108038699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051239_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23935.8	chr4	-	2598	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	-201	-114	-75	114	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTACTTTTCTCTGTG	5468	False	NA	0	True	NA	NA	NA	108075320	108038820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ES.23936.1	chr4	+	2783	4	Antisense	novelGene_ENSMUSG00000034636.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	108075344	108101681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108075411_108076331_108076402_108077626_108077769_108099176
ES.23936.2	chr4	+	2702	3	Antisense	novelGene_ENSMUSG00000034636.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	108076503	108101681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108076559_108077626_108077769_108099176
ES.23937.1	chr4	+	8941	1	Intergenic	novelGene_19623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAAAACACCAAG	NA	False	NA	NA	False	NA	NA	NA	108130757	108139698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108130800_108139700
ES.23937.2	chr4	+	175	1	Intergenic	novelGene_19624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAGAAACAAG	NA	False	NA	NA	False	NA	NA	NA	108136377	108136552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108136400_108136600
ES.23937.3	chr4	+	1707	1	Intergenic	novelGene_19625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	108136758	108138465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108136800_108138500
ES.23937.4	chr4	+	161	2	Antisense	novelGene_ENSMUSG00000034636.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	108138307	108163536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108138322_108163389
ES.23937.5	chr4	+	157	2	Antisense	novelGene_ENSMUSG00000034636.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	108138308	108163533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108138353_108163420
ES.23937.6	chr4	+	158	1	Intergenic	novelGene_19626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	108163375	108163533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108163400_108163500
ES.23938.1	chr4	-	1053	2	Intergenic	novelGene_19622	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATGTGTACTTG	NA	False	NA	NA	False	NA	NA	NA	108086450	108084953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108085758_108086201
ES.23939.1	chr4	-	8749	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-58	0	-58	0	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTCTACTTTCACGTC	NA	False	NA	3	True	AATAAA	-21	NA	108158351	108086920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.10	chr4	-	5549	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-34	3176	-34	-3176	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTTTGTGTACTGAA	NA	False	NA	1	True	AATAAA	-23	NA	108158327	108090096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.11	chr4	-	5533	14	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	-28	-3179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	37.4010726675906	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGTTTTGTGTACT	NA	False	NA	-2	True	AATAAA	-20	NA	108158321	108090099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129574_108158087
ES.23939.12	chr4	-	5492	14	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	14	-3179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.2865126241197	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGTTTTGTGTACT	NA	False	NA	-2	True	AATAAA	-20	NA	108158279	108090099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101928_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.14	chr4	-	5593	15	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	20	-3179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.830150814089	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGTTTTGTGTACT	NA	False	NA	-2	True	AATAAA	-20	NA	108158273	108090099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108108900_108109002_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.15	chr4	-	5348	13	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	23	-3179	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.9518042657276	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGTTTTGTGTACT	NA	False	NA	-2	True	AATAAA	-20	NA	108158270	108090099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108123014_108123770_108129414_108129581_108158087
ES.23939.16	chr4	-	5864	15	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	-61	-3182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.3773246013717	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGGGTTTTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	108158354	108090102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108123870_108124165_108129414_108129581_108158087
ES.23939.18	chr4	-	5471	14	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	31	-3182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	37.3269577537191	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGGGTTTTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	108158262	108090102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123763_108129414_108129581_108158087
ES.23939.19	chr4	-	5372	13	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	-29	-3182	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	38.29590564132	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGGGTTTTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	108158322	108090102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108158087
ES.23939.2	chr4	-	7761	12	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	40.0301539235174	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTCTACTTTCACGTC	NA	False	NA	3	True	AATAAA	-21	NA	108158284	108086920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108158087
ES.23939.22	chr4	-	3399	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	19	5273	19	-5273	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGTTAGTTTTTAGGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	108158274	108092193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.23	chr4	-	3115	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-31	5607	-31	-5607	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGAGTTGGGGTGTGG	NA	False	NA	NA	False	AATACA	-29	NA	108158324	108092527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.24	chr4	-	2836	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	-9	5864	-9	-5864	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATGCCCTTCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	108158302	108092784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.25	chr4	-	2603	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	35	6053	35	5689	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAATCTCTCTCTC	NA	False	NA	NA	False	AAGAAA	-21	NA	108158258	108092973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.26	chr4	-	4033	15	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	38	5624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	44.4584190048203	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCTGATTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	108158255	108093038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108146857_108148356_108158087
ES.23939.27	chr4	-	2358	13	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	44	5619	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	38.29590564132	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAACAGTCTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	108158249	108093043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108158087
ES.23939.28	chr4	-	2517	12	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	-14	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.3597966579212	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCTTATTTTCTACTA	NA	False	NA	NA	False	NA	NA	NA	108158307	108098640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109344_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.4	chr4	-	8499	13	NIC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	38.29590564132	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAAGTGTGGTCTACTT	NA	False	NA	-4	True	AATAAA	-14	NA	108158274	108086927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108158087
ES.23939.6	chr4	-	8255	15	NNC	ENSMUSG00000034636.10	novel	8691	14	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.3031454194666	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAAGTGTGGTCTACT	NA	False	NA	-5	True	AATAAA	-13	NA	108158286	108086928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108091853_108092273_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.8	chr4	-	5900	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	3	2788	3	-2788	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTAGGCTGGTCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	108158290	108089708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.23939.9	chr4	-	5702	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	7	2982	7	-2982	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGGGCTGGGCGGTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	108158286	108089902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ES.2394.1	chr10	-	6381	1	Intergenic	novelGene_1824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTTGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	18371411	18365030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18365000_18371400
ES.2394.2	chr10	-	1119	4	Antisense	novelGene_ENSMUSG00000039835.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.68178700572909	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTTGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	18379121	18365030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_18365779_18373841_18373946_18376937_18377052_18378968
ES.2394.3	chr10	-	3526	1	Antisense	novelGene_ENSMUSG00000039835.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	18375209	18371683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_18371700_18375200
ES.2394.4	chr10	-	4380	1	Intergenic	novelGene_1825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACGCACTTTCATTCT	NA	False	NA	NA	False	AATAAA	-28	NA	18379093	18374713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18374700_18379100
ES.2394.5	chr10	-	2458	2	Antisense	novelGene_ENSMUSG00000039835.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTCCACGCACTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	18379093	18374718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_18377052_18378968
ES.23940.1	chr4	-	160	1	Intergenic	novelGene_19627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	108163946	108163786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108163800_108163900
ES.23941.1	chr4	+	211	1	Intergenic	novelGene_19628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	3563	False	NA	NA	False	NA	NA	NA	108169049	108169260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108169000_108169300
ES.23942.1	chr4	+	199	1	Intergenic	novelGene_19629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTTTATTTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	108181667	108181866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108181700_108181900
ES.23943.1	chr4	+	973	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	-53	2794	-53	67	multi-exon	FALSE	canonical	3	432	junction_2	33.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTGTGTCTTAATTT	NA	False	NA	56	True	AGTAAA	-39	NA	108185283	108195947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.10	chr4	+	4996	4	NNC	ENSMUSG00000048351.15	novel	341	4	NA	NA	10	2121	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	221.136961079679	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTTCTTTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	108185362	108200862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108185488_108189407_108189549_108195319_108199163_108199975
ES.23943.11	chr4	+	4536	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	26	-848	10	848	multi-exon	FALSE	canonical	3	432	junction_2	33.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCCAGTATTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	108185362	108199589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.12	chr4	+	1678	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	31	2005	-7	856	multi-exon	FALSE	canonical	3	432	junction_2	33.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTCTACTTGTCACCA	NA	False	NA	NA	False	NA	NA	NA	108185367	108196736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.2	chr4	+	4432	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	-11	-707	-11	707	multi-exon	FALSE	canonical	3	432	junction_2	33.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACTTTTTTTAAGGCT	NA	False	NA	NA	False	AATAAA	-31	NA	108185325	108199448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.3	chr4	+	3783	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	-5	-64	-5	64	multi-exon	FALSE	canonical	3	432	junction_2	33.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTGAGTATCAGCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	108185331	108198805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.4	chr4	+	870	3	FSM	ENSMUSG00000048351.15	ENSMUST00000134394.8	565	3	-12	-293	1	61	multi-exon	FALSE	canonical	1	8	junction_1	212	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTATGGGGGTGTGTCT	NA	False	NA	50	True	AGTAAA	-33	NA	108185337	108195941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185445_108189407_108189549_108195319
ES.23943.5	chr4	+	2290	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	2	1422	2	-1422	multi-exon	FALSE	canonical	3	432	junction_2	33.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108185338	108197319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.6	chr4	+	2171	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	13	1530	0	1331	multi-exon	FALSE	canonical	3	432	junction_2	33.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGACAAATGATTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	108185349	108197211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.7	chr4	+	5832	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	16	-2134	0	2134	multi-exon	FALSE	canonical	3	432	junction_2	33.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAAAGACTTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	108185352	108200875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185488_108189407_108189549_108195319
ES.23943.8	chr4	+	3644	3	FSM	ENSMUSG00000048351.15	ENSMUST00000134394.8	565	3	7	-3086	4	-7	multi-exon	FALSE	canonical	1	8	junction_1	212	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTACATACTGTTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	108185356	108198734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108185445_108189407_108189549_108195319
ES.23944.1	chr4	-	193	1	Intergenic	novelGene_19630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTCTGCCTGGCAAAG	NA	False	NA	NA	False	NA	NA	NA	108186725	108186532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108186500_108186700
ES.23945.1	chr4	-	171	1	Intergenic	novelGene_19631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	108190388	108190217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108190200_108190400
ES.23946.1	chr4	+	212	1	Intergenic	novelGene_19632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATACAACTTTGCAG	NA	False	NA	NA	False	NA	NA	NA	108209813	108210025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108209800_108210000
ES.23947.1	chr4	+	1783	5	Antisense	novelGene_ENSMUSG00000028597.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCCTTTGCCTGTGTG	NA	False	NA	NA	False	ATTAAA	-6	NA	108240509	108261412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108240708_108256265_108256381_108257659_108257750_108259940_108260144_108260235
ES.23948.1	chr4	-	4657	4	NNC	ENSMUSG00000059816.6	novel	593	3	NA	NA	63	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3414622058798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGAATCTCTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	108240483	108224963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108225239_108234543_108238702_108239233_108239333_108240358
ES.23948.2	chr4	-	1171	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	-568	-10	-568	10	multi-exon	FALSE	canonical	3	46	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGAATCTCTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	108241114	108224963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108225239_108234543_108234684_108240358
ES.23948.3	chr4	-	894	4	NNC	ENSMUSG00000059816.6	novel	593	3	NA	NA	-138	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.7417989148054	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGAATCTCTTTTTT	NA	False	NA	-1	True	AATAAA	-16	NA	108240684	108224963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108225239_108233031_108233185_108234543_108234684_108240358
ES.23948.4	chr4	-	695	3	NNC	ENSMUSG00000059816.6	novel	593	3	NA	NA	3342	-7972	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGGAGAGGCTACAAA	NA	False	NA	NA	False	NA	NA	NA	108237204	108232945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108233185_108234543_108234684_108236888
ES.23949.1	chr4	-	1337	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	-44	-4	-44	4	multi-exon	FALSE	canonical	3	159	junction_2	16.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTTGCCATTCTTG	NA	False	NA	-7	True	AATAAA	-44	NA	108264202	108257582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108258195_108260397_108260660_108263739
ES.23949.2	chr4	-	260	1	Intergenic	novelGene_19633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108263028	108262768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108262800_108263000
ES.2395.1	chr10	-	174	1	Intergenic	novelGene_1826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATCTTTAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	18379764	18379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18379600_18379800
ES.23950.1	chr4	+	192	1	Intergenic	novelGene_19634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	108273903	108274095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108273900_108274100
ES.23951.1	chr4	-	110	1	Intergenic	novelGene_19635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	108285000	108284890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108284900_108285000
ES.23952.1	chr4	+	6468	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-391	3	intron_retention	FALSE	canonical	0	0	junction_1	38.1575098185869	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108316231	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108316338_108316691_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407912_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.10	chr4	+	5818	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.6766964090941	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108317200	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336377_108336419_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.11	chr4	+	4699	27	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.8018269601369	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAAATTTGGTTAATT	NA	False	NA	12	True	AATAAA	-12	NA	108317201	108416609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.13	chr4	+	5734	30	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	581	116	-3	-116	3prime_fragment	FALSE	canonical	3	91	junction_25	21.0061991869214	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAATGTTTTTCCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	108317203	108416496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.14	chr4	+	5951	31	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	42.8975005746903	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108317206	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108381244_108381338_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.15	chr4	+	5728	30	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	0	-131	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_25	25.401508283324	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAACATAAAGATTCTGA	NA	False	NA	NA	False	AATAAA	-2	NA	108317206	108416481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.19	chr4	+	4826	29	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	5	-147	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	33.0740318321286	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAATTAC	NA	False	NA	NA	False	TTTAAA	-6	NA	108317211	108416465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.2	chr4	+	6591	30	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	-142	0	intron_retention	FALSE	canonical	3	50	junction_25	25.401508283324	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	21	True	AATAAA	-21	NA	108316480	108416618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.20	chr4	+	5631	29	NIC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	5	-109	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	37.624538101443	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTCCTTTACATACTT	NA	False	NA	-94	True	AATAAA	-24	NA	108317211	108416503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.22	chr4	+	5509	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	37.7710104062703	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108317213	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412920_108413027_108414518_108414672_108415911
ES.23952.23	chr4	+	5827	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	32.3337971045189	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTCAAATTTGGTTA	NA	False	NA	9	True	AATAAA	-9	NA	108317213	108416606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406444_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.24	chr4	+	5894	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	39.6221599052292	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108317213	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108381286_108381338_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.25	chr4	+	2284	8	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	22100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.3177949421827	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAACTTTTCTTGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	108317213	108358450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108357819
ES.23952.28	chr4	+	2719	11	ISM	ENSMUSG00000034610.15	ENSMUST00000097925.9	5865	30	7	50452	7	-15381	5prime_fragment	FALSE	canonical	3	116	junction_4	13.0418556961807	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGCTGGCTTACTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	108317213	108366166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417
ES.23952.29	chr4	+	5849	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	37.4917509753939	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108317213	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413018_108414518_108414672_108415911
ES.23952.3	chr4	+	6426	30	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	11	0	intron_retention	FALSE	canonical	3	91	junction_25	21.0061991869214	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	21	True	AATAAA	-21	NA	108316633	108416618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.30	chr4	+	5334	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	32.9946291925755	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAATTTGGTTAATTCA	NA	False	NA	14	True	AATAAA	-14	NA	108317213	108416611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911_108416023_108416527
ES.23952.32	chr4	+	6112	32	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	52.7785312516577	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317216	108416612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108381240_108381338_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108395662_108395826_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.34	chr4	+	5652	29	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.6711853739929	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAAATTTGGTTAATTC	NA	False	NA	13	True	AATAAA	-13	NA	108317221	108416610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.38	chr4	+	8419	28	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	484	-2	intron_retention	FALSE	canonical	3	28	junction_24	28.9707292798586	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAAATTTGGTTAATTC	8603	False	NA	13	True	AATAAA	-13	NA	108336761	108416610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407912_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.4	chr4	+	6032	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	37.9242519885217	233	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108316637	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108316837_108317213_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407912_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.40	chr4	+	4196	29	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	7476	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.3726537177932	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108343753	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108343815_108348544_108348666_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911_108416023_108416529
ES.23952.42	chr4	+	4185	23	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	43539	3	-23509	-3	3prime_fragment	FALSE	canonical	3	91	junction_18	21.8289746032974	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAAATTTGGTTAATT	NA	False	NA	12	True	AATAAA	-12	NA	108360161	108416609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.43	chr4	+	4115	22	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	46396	4	-20652	-4	3prime_fragment	FALSE	canonical	3	91	junction_17	22.2445692625864	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108363018	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.44	chr4	+	4000	21	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	-18569	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_20	38.4945125959532	229	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAATTTGGTTAATTCA	NA	False	NA	14	True	AATAAA	-14	NA	108365101	108416611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
ES.23952.46	chr4	+	3688	19	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-14399	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.1634750472654	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108369271	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406370_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.47	chr4	+	3135	19	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-13089	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.8898405813272	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108370581	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108395662_108395826_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.48	chr4	+	5067	14	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-2320	-4	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_9	32.0397312519663	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108381350	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.49	chr4	+	2386	13	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	67487	4	439	-4	3prime_fragment	FALSE	canonical	3	91	junction_8	22.6954474142576	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTCAAATTTGGTTAAT	NA	False	NA	11	True	AATAAA	-11	NA	108384109	108416608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.5	chr4	+	5366	29	NIC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	199	0	intron_retention	FALSE	canonical	2	5	junction_1	38.9673299845197	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	21	True	AATAAA	-21	NA	108316821	108416618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
ES.23952.50	chr4	+	3768	10	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	80749	147	-2091	-147	3prime_fragment	FALSE	canonical	3	91	junction_5	21.1974841274462	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAATTAC	5916	False	NA	NA	False	TTTAAA	-6	NA	108397371	108416465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.51	chr4	+	1768	1	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-787	13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGAAAACCCATTTATT	7220	False	NA	NA	False	NA	NA	NA	108398675	108400443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108398700_108400400
ES.23952.52	chr4	+	5536	1	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	-2181	-2996	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCATGTGTACCTAT	NA	False	NA	NA	False	NA	NA	NA	108404100	108409636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108404100_108409600
ES.23952.53	chr4	+	2499	2	ISM	ENSMUSG00000034610.15	ENSMUST00000127602.2	484	3	-443	2996	-443	-2996	5prime_fragment	FALSE	canonical	3	163	junction_1	0	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCGCATGTGTACCTAT	NA	False	NA	NA	False	NA	NA	NA	108405838	108409636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108406611_108407909
ES.23952.54	chr4	+	4807	4	NNC	ENSMUSG00000034610.15	novel	587	3	NA	NA	-1552	2385	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	70.8660708661063	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGTGTCTCTATGTTG	NA	False	NA	NA	False	AATAAA	-15	NA	108411096	108419003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108411736_108412103_108413027_108414518_108414672_108415911
ES.23952.55	chr4	+	2181	2	ISM	ENSMUSG00000034610.15	ENSMUST00000128042.2	587	3	261	-363	261	2	3prime_fragment	FALSE	canonical	3	135	junction_1	0	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGGTTAATTCATCT	NA	False	NA	17	True	AATAAA	-17	NA	108413193	108416614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108414672_108415911
ES.23952.56	chr4	+	6097	2	ISM	ENSMUSG00000034610.15	ENSMUST00000128042.2	587	3	1585	-5603	1585	5236	3prime_fragment	FALSE	canonical	3	135	junction_1	0	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTTTCAATGTATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	108414517	108421854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108414672_108415911
ES.23952.6	chr4	+	5969	31	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	207	3	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	30.6743468643679	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGTTAATTCATCTG	NA	False	NA	18	True	AATAAA	-18	NA	108316829	108416615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108316956_108317213_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23952.7	chr4	+	7257	29	NIC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	241	-3	intron_retention	FALSE	canonical	3	116	junction_4	18.8591719687514	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAAATTTGGTTAATT	NA	False	NA	12	True	AATAAA	-12	NA	108316863	108416609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ES.23953.1	chr4	-	175	1	Intergenic	novelGene_19636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAGCCACAC	NA	False	NA	NA	False	NA	NA	NA	108324586	108324411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108324400_108324600
ES.23954.1	chr4	-	212	1	Intergenic	novelGene_19637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAACGTGCTATGGGTTC	NA	False	NA	NA	False	NA	NA	NA	108355761	108355549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108355500_108355800
ES.23955.1	chr4	-	175	1	Intergenic	novelGene_19638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGAGAGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	108386241	108386066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108386100_108386200
ES.23956.1	chr4	-	178	1	Intergenic	novelGene_19639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	108393744	108393566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108393600_108393700
ES.23957.1	chr4	-	7452	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	35	-5971	35	4273	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGATTTGTTTTGTT	NA	False	NA	NA	False	TTTAAA	-35	NA	108436498	108416095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ES.23957.11	chr4	-	6315	8	NIC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	215	1	intron_retention	FALSE	canonical	3	481	junction_6	39.5174980617602	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGGCTTTTTGTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	108436318	108422068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108432688_108434125_108434286_108436181
ES.23957.12	chr4	-	3956	9	NIC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	35	1	intron_retention	FALSE	canonical	3	481	junction_7	37.2659361884282	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGGCTTTTTGTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	108436498	108422068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108432688_108434125_108434286_108436181
ES.23957.13	chr4	-	1302	10	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	204	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	175.330657633435	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTCTGGCTTTTTGTT	NA	False	NA	-12	True	ATTAAA	-16	NA	108436329	108422070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427358_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ES.23957.15	chr4	-	1454	10	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_2	162.064763765357	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTCTCTGGCTTTTT	NA	False	NA	-15	True	ATTAAA	-13	NA	108436498	108422073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424639_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ES.23957.2	chr4	-	6343	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	20	-4847	20	3149	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAACTCTGATGTTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	108436513	108417219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ES.23957.3	chr4	-	1531	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	-11	-4	-11	4	multi-exon	FALSE	canonical	3	462	junction_7	44.4233283170614	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTGTTTCTTCTCT	NA	False	NA	-4	True	ATTAAA	-24	NA	108436544	108422062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ES.23957.4	chr4	-	1160	8	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	189.176302610522	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTTTTGTTTCTTCT	NA	False	NA	-6	True	ATTAAA	-22	NA	108436498	108422064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108434240_108434286_108436181
ES.23957.5	chr4	-	5941	8	NIC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	11	1	intron_retention	FALSE	canonical	3	462	junction_6	49.3550237295753	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTTTGTTTCTTC	NA	False	NA	-7	True	ATTAAA	-21	NA	108436522	108422065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108430089_108432565_108432688_108434125
ES.23957.7	chr4	-	891	7	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	206.905305769464	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436498	108422066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108436403
ES.23957.8	chr4	-	4475	9	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	215	0	intron_retention	TRUE	non_canonical	0	0	junction_8	184.445749137788	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436318	108422066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108435525_108435684
ES.23957.9	chr4	-	2210	10	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	175.921138336416	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436512	108422066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430804_108432565_108432688_108434125_108434286_108436181
ES.23958.1	chr4	+	3561	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	-41	0	intron_retention	FALSE	canonical	3	458	junction_7	62.1662287741504	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5200	False	NA	21	True	NA	NA	NA	108436578	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.11	chr4	+	2814	16	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	197.251604697036	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAACTGGTATGGTTT	5273	False	NA	16	True	NA	NA	NA	108436651	108472025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470287_108470354_108471477
ES.23958.14	chr4	+	4822	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	458	junction_7	64.1880210071656	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5273	False	NA	21	True	NA	NA	NA	108436651	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.15	chr4	+	2894	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	150.189762779458	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5273	False	NA	8	True	NA	NA	NA	108436651	108471880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460553_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.17	chr4	+	4499	2	ISM	ENSMUSG00000028587.19	ENSMUST00000130162.2	679	4	22	2526	2	-2385	5prime_fragment	FALSE	canonical	3	542	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTGTGGAGTCA	5274	False	NA	NA	False	NA	NA	NA	108436652	108450251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108436773_108445872
ES.23958.18	chr4	+	2829	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	2	15	junction_3	146.355488072326	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5274	False	NA	17	True	NA	NA	NA	108436652	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.19	chr4	+	3915	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	2	-903	2	903	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGCTATTAGTCTTC	5274	False	NA	NA	False	ATTAAA	-16	NA	108436652	108472933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.2	chr4	+	3075	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-58	-3	-27	3	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGGTTTGGGGTGCA	5214	False	NA	24	True	NA	NA	NA	108436592	108472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.20	chr4	+	7872	14	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	458	junction_5	62.6536454640975	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGGTATGGTTTGGGG	5274	False	NA	20	True	NA	NA	NA	108436652	108472029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.21	chr4	+	3657	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-150	intron_retention	FALSE	canonical	3	22	junction_2	153.890250450357	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5274	False	NA	8	True	NA	NA	NA	108436652	108471880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.22	chr4	+	2887	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5274	False	NA	21	True	NA	NA	NA	108436652	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.23	chr4	+	3337	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-150	intron_retention	FALSE	canonical	3	458	junction_7	62.1662287741504	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5274	False	NA	8	True	NA	NA	NA	108436652	108471880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.24	chr4	+	3315	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	7	-308	7	308	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTGCAATCCCAAAACT	5279	False	NA	NA	False	NA	NA	NA	108436657	108472338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.25	chr4	+	2364	15	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	-348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	236.792997086881	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTGCTTTGTCTCAG	5279	False	NA	-61	True	NA	NA	NA	108436657	108471682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470263_108470354_108471477
ES.23958.26	chr4	+	3034	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	150.189762779458	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5279	False	NA	17	True	NA	NA	NA	108436657	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460553_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.27	chr4	+	3003	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	149.94476847743	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5279	False	NA	17	True	NA	NA	NA	108436657	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445973_108447843_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.28	chr4	+	5719	14	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	3	intron_retention	FALSE	canonical	3	458	junction_7	63.7796688126095	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGGTTTGGGGTGCA	5279	False	NA	24	True	NA	NA	NA	108436657	108472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108459251_108460584_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.29	chr4	+	2732	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	-150	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5279	False	NA	8	True	NA	NA	NA	108436657	108471880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.3	chr4	+	2920	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-54	148	-23	-148	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGGAGAATTTGTATG	5218	False	NA	10	True	NA	NA	NA	108436596	108471882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.30	chr4	+	4030	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	7	1195	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	149.820722494883	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGACATTTTTAAGGA	5279	False	NA	10	True	AATAAA	-18	NA	108436657	108473225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.31	chr4	+	2903	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	148.878935716239	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTTCTGGGAGAATT	5281	False	NA	4	True	NA	NA	NA	108436659	108471876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470213_108470354_108471477
ES.23958.33	chr4	+	3561	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-4	intron_retention	FALSE	canonical	3	458	junction_7	61.5309858707158	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5281	False	NA	17	True	NA	NA	NA	108436659	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.34	chr4	+	2871	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.226443660895	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTTCTGGGAGAATT	5281	False	NA	4	True	NA	NA	NA	108436659	108471876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445852_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.35	chr4	+	4871	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-5	intron_retention	FALSE	canonical	3	458	junction_7	60.0429475921657	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAACTGGTATGGTTT	5281	False	NA	16	True	NA	NA	NA	108436659	108472025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.36	chr4	+	2499	14	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	9	8171	9	619	5prime_fragment	FALSE	canonical	3	458	junction_7	56.6386866761789	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAGACTAGTATGATTC	5281	False	NA	NA	False	GATAAA	-16	NA	108436659	108463859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434
ES.23958.37	chr4	+	2768	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	159.081611708184	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGAACTGGTATGGTT	5281	False	NA	15	True	NA	NA	NA	108436659	108472024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.38	chr4	+	3014	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.226443660895	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5281	False	NA	17	True	NA	NA	NA	108436659	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445859_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.39	chr4	+	7692	13	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	0	intron_retention	FALSE	canonical	3	458	junction_6	67.89467946754	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5281	False	NA	21	True	NA	NA	NA	108436659	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.4	chr4	+	2804	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-52	262	-21	-262	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATTTTCCATTA	5220	False	NA	25	True	AATATA	-22	NA	108436598	108471768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.41	chr4	+	3054	18	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	188.357533838265	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5281	False	NA	21	True	NA	NA	NA	108436659	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108464155_108464205_108469247_108469418_108470265_108470354_108471477
ES.23958.42	chr4	+	2675	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-158	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	149.820722494883	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAATAGTTCTGGGAG	5281	False	NA	0	True	NA	NA	NA	108436659	108471872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.43	chr4	+	3203	16	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	9	926	9	-926	5prime_fragment	FALSE	canonical	3	458	junction_7	55.1829281169055	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5281	False	NA	NA	False	NA	NA	NA	108436659	108471104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265
ES.23958.44	chr4	+	2570	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-263	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	149.820722494883	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTTATTTTCCATT	5281	False	NA	24	True	AATATA	-21	NA	108436659	108471767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.45	chr4	+	2987	18	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-156	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	190.911055577901	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAGTTCTGGGAGAA	5281	False	NA	2	True	NA	NA	NA	108436659	108471874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108444807_108444946_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.46	chr4	+	4339	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	0	intron_retention	FALSE	canonical	3	458	junction_7	62.3101917827252	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5281	False	NA	21	True	NA	NA	NA	108436659	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.47	chr4	+	8548	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-150	intron_retention	FALSE	canonical	3	458	junction_7	62.2668094216779	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTGGGAGAATTTGTA	5281	False	NA	8	True	NA	NA	NA	108436659	108471880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108469418_108470265_108470354_108471477
ES.23958.48	chr4	+	2914	18	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	192.370425541031	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATTTTCCATTATTT	5281	False	NA	28	True	TATAAA	-1	NA	108436659	108471771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108457913_108458082_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.49	chr4	+	2907	18	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	-244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	192.216645362272	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGCTTTTTCCA	5281	False	NA	43	True	TATAAA	-16	NA	108436659	108471786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108457674_108457821_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.50	chr4	+	3782	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	902	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGCTATTAGTCTT	5281	False	NA	NA	False	ATTAAA	-15	NA	108436659	108472932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.51	chr4	+	3969	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	1195	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	159.081611708184	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGACATTTTTAAGGA	5281	False	NA	10	True	AATAAA	-18	NA	108436659	108473225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.52	chr4	+	5678	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	1195	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	149.57418727842	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGACATTTTTAAGGA	5281	False	NA	10	True	AATAAA	-18	NA	108436659	108473225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108457674_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.53	chr4	+	2701	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_2	151.778588068009	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5281	False	NA	21	True	NA	NA	NA	108436659	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.54	chr4	+	4067	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	13	1191	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTATCAGGACATTTTTA	5285	False	NA	6	True	AATAAA	-14	NA	108436663	108473221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.55	chr4	+	2877	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	153.122986154558	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5285	False	NA	17	True	NA	NA	NA	108436663	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108469247_108469418_108470265_108470354_108471477
ES.23958.56	chr4	+	3142	19	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	13	-173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.624820383296	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACTTGTATCTATATA	5285	False	NA	-15	True	NA	NA	NA	108436663	108471857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108457674_108457821_108457913_108458082_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.57	chr4	+	3089	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	13	-262	intron_retention	FALSE	canonical	3	22	junction_2	154.341392070055	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTATTTTCCATTA	5285	False	NA	25	True	AATATA	-22	NA	108436663	108471768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.58	chr4	+	2874	16	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.44426883954	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5287	False	NA	17	True	NA	NA	NA	108436665	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108450489_108450673_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.59	chr4	+	2970	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_13	145.694229788794	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5288	False	NA	17	True	NA	NA	NA	108436666	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463458_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.6	chr4	+	4252	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	-37	-1201	-6	1201	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTTAAGGATTATTT	5235	False	NA	16	True	AATAAA	-24	NA	108436613	108473231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.60	chr4	+	2714	14	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	32	7933	32	857	5prime_fragment	FALSE	canonical	3	458	junction_7	56.6386866761789	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCTGTGCGTGTTTT	5304	False	NA	NA	False	NA	NA	NA	108436682	108464097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434
ES.23958.61	chr4	+	2975	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.194444283902	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	5305	False	NA	17	True	NA	NA	NA	108436683	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452846_108454332_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.62	chr4	+	3533	17	NNC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	33	-154	intron_retention	FALSE	canonical	0	0	junction_9	196.319732833967	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTTCTGGGAGAATT	5305	False	NA	4	True	NA	NA	NA	108436683	108471876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108457674_108457821_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.64	chr4	+	3369	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	33	0	intron_retention	FALSE	canonical	3	20	junction_10	153.591294396153	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5305	False	NA	21	True	NA	NA	NA	108436683	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.65	chr4	+	4114	14	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	62	6503	62	2287	5prime_fragment	FALSE	canonical	3	458	junction_7	56.6386866761789	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAATGGCTAGTGCTTT	5334	False	NA	NA	False	NA	NA	NA	108436712	108465527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434
ES.23958.66	chr4	+	3144	18	NNC	ENSMUSG00000028587.19	novel	670	3	NA	NA	3086	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.373328510145	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	8358	False	NA	17	True	NA	NA	NA	108439736	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108439855_108444807_108444946_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.67	chr4	+	4203	17	NNC	ENSMUSG00000028587.19	novel	670	3	NA	NA	3088	1195	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	149.118228576355	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGACATTTTTAAGGA	8360	False	NA	10	True	AATAAA	-18	NA	108439738	108473225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108439855_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.68	chr4	+	4558	16	NNC	ENSMUSG00000028587.19	novel	443	3	NA	NA	3635	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.740431560563	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	8907	False	NA	21	True	NA	NA	NA	108440285	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108442081_108445829_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.69	chr4	+	175	1	Intergenic	novelGene_19640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9208	False	NA	NA	False	NA	NA	NA	108440586	108440761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108440600_108440800
ES.23958.7	chr4	+	3606	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2	-275	intron_retention	FALSE	canonical	3	458	junction_7	64.0490883173657	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTGTTATAAATTTG	5243	False	NA	12	True	AATATA	-9	NA	108436621	108471755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.70	chr4	+	3778	16	NNC	ENSMUSG00000028587.19	novel	443	3	NA	NA	4283	-132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.740431560563	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTTAGGTATACTGG	9555	False	NA	26	True	NA	NA	NA	108440933	108471898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108442081_108445829_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.71	chr4	+	5082	17	NNC	ENSMUSG00000028587.19	novel	670	3	NA	NA	-4075	1210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.226443660895	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTATTTTGTATGTAT	9765	False	NA	25	True	AATAAA	-33	NA	108441143	108473240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108442081_108445829_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.72	chr4	+	3306	17	NNC	ENSMUSG00000028587.19	novel	670	3	NA	NA	-3513	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.226443660895	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGGTATGGTTTG	NA	False	NA	17	True	NA	NA	NA	108441705	108472026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108442081_108445829_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.73	chr4	+	5890	14	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	2042	0	intron_retention	FALSE	canonical	3	458	junction_4	62.1145153547179	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	NA	False	NA	21	True	NA	NA	NA	108447260	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.74	chr4	+	2632	15	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	11197	156	2629	-156	3prime_fragment	FALSE	canonical	3	458	junction_5	61.1872752544287	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAGTTCTGGGAGAA	NA	False	NA	2	True	NA	NA	NA	108447847	108471874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.75	chr4	+	6027	13	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	3776	0	intron_retention	FALSE	canonical	3	458	junction_4	60.5618944184836	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	NA	False	NA	21	True	NA	NA	NA	108448994	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.76	chr4	+	2207	13	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	15870	280	7302	-280	3prime_fragment	FALSE	canonical	3	458	junction_3	55.9707264757411	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAATTGTTGTTATAA	NA	False	NA	7	True	AATATA	-4	NA	108452520	108471750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.77	chr4	+	1711	10	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	20476	5	-4161	-5	3prime_fragment	FALSE	canonical	3	502	junction_1	47.3061998390261	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAACTGGTATGGTTT	NA	False	NA	16	True	NA	NA	NA	108457126	108472025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.78	chr4	+	6927	3	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	1688	-156	intron_retention	FALSE	canonical	3	612	junction_1	32.5	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAGTTCTGGGAGAA	2049	False	NA	2	True	NA	NA	NA	108462975	108471874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108469418_108470265_108470354_108471477
ES.23958.79	chr4	+	3678	1	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	6171	-894	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTAGAAAAGAAAAAGTGT	418	False	NA	NA	False	NA	NA	NA	108467458	108471136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108467500_108471100
ES.23958.8	chr4	+	4564	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	-5	-264	intron_retention	FALSE	canonical	3	458	junction_7	64.1880210071656	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTGTTATTTTCCAT	5267	False	NA	23	True	AATATA	-20	NA	108436645	108471766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23958.80	chr4	+	4557	3	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	32624	-3773	7987	3773	3prime_fragment	FALSE	canonical	3	612	junction_1	32.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGGCTCATTTGAGT	2234	False	NA	NA	False	TATAAA	-15	NA	108469274	108475803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108469418_108470265_108470354_108471477
ES.23958.9	chr4	+	5534	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	-5	0	intron_retention	FALSE	canonical	3	458	junction_6	61.6233721894542	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5267	False	NA	21	True	NA	NA	NA	108436645	108472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108436773_108445872_108445979_108447849_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ES.23959.1	chr4	-	4923	5	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	1367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACACATAACTAGTAG	1843	False	NA	NA	False	NA	NA	NA	108458864	108448254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450661_108452514_108452841_108454325_108454674_108456517_108456620_108457123
ES.23959.2	chr4	-	5692	5	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	1367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACACATAACTAGTAG	1843	False	NA	NA	False	NA	NA	NA	108458864	108448254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450661_108452514_108452841_108454325_108455212_108456286_108456620_108457123
ES.23959.3	chr4	-	7271	3	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	1367	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACACATAACTAGTAG	1843	False	NA	NA	False	NA	NA	NA	108458864	108448254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450661_108452514_108452841_108454325
ES.23959.4	chr4	-	5428	4	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18181	1367	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACACATAACTAGTAG	1842	False	NA	NA	False	NA	NA	NA	108458865	108448254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450661_108452514_108452841_108454325_108454674_108456517
ES.23959.5	chr4	-	6111	4	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	1335	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	1843	False	NA	NA	False	NA	NA	NA	108458864	108448286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450668_108452525_108452841_108454325_108455189_108456312
ES.23959.6	chr4	-	7596	3	NNC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	1331	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	1843	False	NA	NA	False	NA	NA	NA	108458864	108448290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108450661_108452514_108455189_108456312
ES.23959.8	chr4	-	3658	1	NIC	ENSMUSG00000084968.2	novel	3700	4	NA	NA	18182	-5585	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAGAAATCCTGTCTCC	1843	False	NA	NA	False	NA	NA	NA	108458864	108455206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108455200_108458900
ES.2396.1	chr10	-	174	1	Intergenic	novelGene_1827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	18396031	18395857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18395900_18396000
ES.23960.1	chr4	+	3434	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	-39	-92	-39	92	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCCTGCTCTCTGTCA	3494	False	NA	105	True	NA	NA	NA	108477097	108491412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.10	chr4	+	3291	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.2787691235458	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTATGTAGCCATTT	3549	False	NA	10	True	NA	NA	NA	108477152	108491317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485029_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490710
ES.23960.11	chr4	+	3277	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	46.4398505835476	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGTAGCCATTTTTA	3552	False	NA	13	True	NA	NA	NA	108477155	108491320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483877_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.13	chr4	+	3231	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	21	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	46.4380561130153	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	3554	False	NA	-20	True	NA	NA	NA	108477157	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484598_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.15	chr4	+	3679	24	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	21	-6	intron_retention	FALSE	canonical	3	165	junction_7	22.7113056129872	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3554	False	NA	7	True	NA	NA	NA	108477157	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.16	chr4	+	3445	26	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	22	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.8973887366834	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCCATTTTTATTTT	3555	False	NA	17	True	NA	NA	NA	108477158	108491324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481392_108481553_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.17	chr4	+	4645	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	24	-1366	24	1366	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCATGTCCTTTCTTTCG	3557	False	NA	NA	False	AATGAA	-21	NA	108477160	108492686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.18	chr4	+	3451	24	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	26	-15	intron_retention	FALSE	canonical	3	165	junction_8	22.1513952160785	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	3559	False	NA	-20	True	NA	NA	NA	108477162	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.2	chr4	+	3307	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	-16	12	-16	6	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTATCAGTTTTATG	3517	False	NA	1	True	NA	NA	NA	108477120	108491308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.21	chr4	+	3366	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.0112395132392	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3559	False	NA	7	True	NA	NA	NA	108477162	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482504_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487026_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.22	chr4	+	3349	25	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	45.8396207808631	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTATGTAGCCATTTTT	3560	False	NA	12	True	NA	NA	NA	108477163	108491319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482530_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.23	chr4	+	4838	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	27	-1562	27	1562	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTATTGCATGTCC	3560	False	NA	NA	False	NA	NA	NA	108477163	108492882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.24	chr4	+	2890	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	27	386	27	-368	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAACCGCTGCATAGTAAT	3560	False	NA	NA	False	NA	NA	NA	108477163	108490934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.25	chr4	+	3356	26	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.3982626008539	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3560	False	NA	7	True	NA	NA	NA	108477163	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481174_108481261_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.28	chr4	+	2880	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	29	-369	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	45.9177253356479	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACCGCTGCATAGTAA	3562	False	NA	NA	False	NA	NA	NA	108477165	108490933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487356_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.29	chr4	+	5921	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	32	-2650	32	2650	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTTGGTGACTTAAT	3565	False	NA	NA	False	TATAAA	-27	NA	108477168	108493970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.3	chr4	+	3414	24	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	165	junction_8	22.8301031663462	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3519	False	NA	7	True	NA	NA	NA	108477122	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.30	chr4	+	3101	24	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	40	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	46.986423651534	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAAAAGGAAAAAAGA	3573	False	NA	-23	True	NA	NA	NA	108477176	108491284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.31	chr4	+	3271	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	41	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.4339248287284	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAGGAAAAAAGAA	3574	False	NA	-22	True	NA	NA	NA	108477177	108491285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481596_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.32	chr4	+	4222	21	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	43	-15	intron_retention	FALSE	canonical	3	165	junction_6	18.1087685942474	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	3576	False	NA	-20	True	NA	NA	NA	108477179	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482731_108482851_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487793_108488792_108488893_108489031_108489123_108490367
ES.23960.34	chr4	+	3348	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	44	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	58.5557070944697	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTTTATGTAGCCAT	3577	False	NA	8	True	NA	NA	NA	108477180	108491315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482530_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485759_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.36	chr4	+	3169	24	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	45	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	47.0640074149116	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3578	False	NA	7	True	NA	NA	NA	108477181	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.37	chr4	+	5980	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	47	2715	intron_retention	FALSE	non_canonical	0	0	junction_24	43.8348383772035	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGACCTGTCTGTATGG	3580	False	NA	NA	False	CATAAA	-18	NA	108477183	108494035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490710
ES.23960.38	chr4	+	4003	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	48	6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	45.736090022602	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTATCAGTTTTATG	3581	False	NA	1	True	NA	NA	NA	108477184	108491308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108481553_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.39	chr4	+	3446	24	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	48	6	intron_retention	FALSE	canonical	0	0	junction_5	47.180704780574	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTATCAGTTTTATG	3581	False	NA	1	True	NA	NA	NA	108477184	108491308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482504_108482731_108482851_108483012_108483177_108483351_108483497_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.40	chr4	+	3500	26	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	50	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.4820667443599	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	3583	False	NA	-20	True	NA	NA	NA	108477186	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482504_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485601_108485673_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487504_108487601_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.41	chr4	+	3766	23	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	71	-17	intron_retention	FALSE	canonical	3	165	junction_6	23.1270743988066	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAGGAAAAAAGAA	3604	False	NA	-22	True	NA	NA	NA	108477207	108491285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482731_108482851_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.42	chr4	+	3337	26	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	74	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.8973887366834	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3607	False	NA	7	True	NA	NA	NA	108477210	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481438_108481553_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.45	chr4	+	2521	19	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	5713	33	-102	-15	3prime_fragment	FALSE	canonical	3	165	junction_2	24.8891989067994	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	3632	False	NA	-20	True	NA	NA	NA	108482849	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.46	chr4	+	7042	19	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	-102	4479	intron_retention	FALSE	non_canonical	0	0	junction_18	49.4823824491051	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCTAGTGTGTAGTAAA	3632	False	NA	NA	False	AGTAAA	-15	NA	108482849	108495799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490710
ES.23960.47	chr4	+	2840	16	NNC	ENSMUSG00000028582.15	novel	2917	23	NA	NA	251	-6	intron_retention	FALSE	canonical	0	0	junction_7	73.149587983954	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	4278	False	NA	7	True	NA	NA	NA	108483495	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485489_108485601_108485673_108485779_108485906_108486770_108486830_108486913_108487363_108487474_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.48	chr4	+	3185	14	NNC	ENSMUSG00000028582.15	novel	2917	23	NA	NA	731	4	intron_retention	FALSE	non_canonical	0	0	junction_13	57.3659487065796	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCCATTTTTATTTT	4758	False	NA	17	True	NA	NA	NA	108483975	108491324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108490501_108490710
ES.23960.49	chr4	+	2681	8	NIC	ENSMUSG00000028582.15	novel	2892	16	NA	NA	1736	-880	intron_retention	FALSE	canonical	3	196	junction_1	13.7365890071378	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGAACCTTCTCTTG	5763	False	NA	NA	False	NA	NA	NA	108484980	108489580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108488893_108489031
ES.23960.5	chr4	+	3493	24	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	7	junction_4	59.41800278384	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTTATGTAGCCATTT	3529	False	NA	10	True	NA	NA	NA	108477132	108491317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482046_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484616_108485027_108485146_108485226_108485400_108485759_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.50	chr4	+	2081	7	NIC	ENSMUSG00000028582.15	novel	2892	16	NA	NA	-1025	-15	intron_retention	FALSE	canonical	3	182	junction_4	15.6284996080878	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAGAAAA	6544	False	NA	-20	True	NA	NA	NA	108485761	108491287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108485906_108486770_108486830_108486913_108487363_108487474_108487793_108488792_108488893_108489031_108489123_108490367
ES.23960.51	chr4	+	3215	2	FSM	ENSMUSG00000028582.15	ENSMUST00000126156.2	729	2	-511	-1975	-511	-886	multi-exon	FALSE	canonical	3	226	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAAAGAACCTT	7058	False	NA	NA	False	NA	NA	NA	108486275	108489574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108486830_108486913
ES.23960.52	chr4	+	1686	1	Antisense	novelGene_ENSMUSG00000091985.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAGAAAATCAAGAGTG	NA	False	NA	NA	False	AATAAA	-4	NA	108492949	108494635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108492900_108494600
ES.23960.7	chr4	+	3246	25	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	1	6	junction_7	45.4064973324303	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGCCATTTTTATTTTA	3538	False	NA	18	True	NA	NA	NA	108477141	108491325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483234_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.8	chr4	+	3410	25	NIC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	6	4	combination_of_known_junctions	FALSE	canonical	2	3	junction_20	45.7368492028036	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCCATTTTTATTTT	3539	False	NA	17	True	NA	NA	NA	108477142	108491324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487504_108487601_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23960.9	chr4	+	3309	25	NNC	ENSMUSG00000028582.15	novel	3303	25	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	44.668668332015	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGTTTTATGTAGCCA	3541	False	NA	7	True	NA	NA	NA	108477144	108491314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485759_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ES.23961.1	chr4	+	178	1	Intergenic	novelGene_19642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108502381	108502559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108502400_108502600
ES.23962.1	chr4	+	1998	1	Intergenic	novelGene_19644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108566950	108568948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108567000_108568900
ES.23963.1	chr4	-	2935	25	Genic_Genomic	ENSMUSG00000102912.2	novel	2288	1	NA	NA	-8519	3009	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCGTGCGCATGTGCGCG	NA	False	NA	NA	False	NA	NA	NA	108490932	108477116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_108477269_108478706_108478790_108480645_108480792_108481639_108481745_108482044_108482197_108482598_108482729_108482849_108483010_108483175_108483349_108483495_108483571_108483675_108483786_108483868_108484000_108484242_108484315_108484487_108484622_108485031_108485143_108485222_108485398_108485777_108485905_108486769_108486829_108486912_108487024_108487281_108487361_108487472_108487533_108487739_108487790_108488789_108488892_108489030_108489121_108490365_108490498_108490716
ES.23964.1	chr4	-	6559	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-100	0	-100	0	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACACTCTTGATTTT	534	False	NA	NA	False	NA	NA	NA	108638095	108494662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.10	chr4	-	176	1	Intergenic	novelGene_19641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	108498606	108498430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108498400_108498600
ES.23964.11	chr4	-	159	1	Intergenic	novelGene_19643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	108518312	108518153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108518200_108518300
ES.23964.12	chr4	-	4242	14	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-71	-34931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	8.21961861508883	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCTGGTGGAATTAA	563	False	NA	NA	False	ATTAAA	-30	NA	108638066	108531386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108557266_108557349_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.13	chr4	-	4174	13	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-95	36734	-95	-34941	5prime_fragment	FALSE	canonical	3	8	junction_1	5.78791845139511	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGCTATAAAATTTCTG	539	False	NA	NA	False	ATTAAA	-20	NA	108638090	108531396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.14	chr4	-	4456	11	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	62	42556	62	-40763	5prime_fragment	FALSE	canonical	3	12	junction_2	4.53431361950185	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATATGTTCTCAACAA	696	False	NA	NA	False	AATAAA	-38	NA	108637933	108537218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.15	chr4	-	4483	11	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-112	42703	-112	-40910	5prime_fragment	FALSE	canonical	3	12	junction_2	4.53431361950185	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTTCTGAGCATTAG	522	False	NA	NA	False	NA	NA	NA	108638107	108537365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.16	chr4	-	3527	10	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-108	-45610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.21083634491676	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAGAGGCCTTATAA	526	False	NA	NA	False	TTTAAA	-6	NA	108638103	108542065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108542229_108543258_108543381_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.17	chr4	-	3399	9	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-103	47404	-103	-45611	5prime_fragment	FALSE	canonical	3	17	junction_6	3.56852560590505	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTAGAGGCCTTATA	531	False	NA	NA	False	TTTAAA	-5	NA	108638098	108542066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.18	chr4	-	3026	8	ISM	ENSMUSG00000034557.15	ENSMUST00000106658.8	5987	18	-203	47405	92	-45612	5prime_fragment	FALSE	canonical	1	1	junction_3	7.55928946018454	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTAGAGGCCTTAT	726	False	NA	NA	False	TTTAAA	-4	NA	108637903	108542067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108542229_108546345_108546467_108548818_108548989_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.19	chr4	-	4845	1	NIC	ENSMUSG00000034557.15	novel	5987	18	NA	NA	5660	-74113	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTGTCTATCTATC	3928	False	NA	NA	False	AATAAA	-18	NA	108575413	108570568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108570600_108575400
ES.23964.2	chr4	-	4903	20	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-72	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.05027454721699	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTACACTCTTGATT	562	False	NA	NA	False	NA	NA	NA	108638067	108494664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108494784_108496409_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.20	chr4	-	3662	3	ISM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	107	83114	107	-81321	5prime_fragment	FALSE	canonical	3	18	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTCAGATAAACTTTA	741	False	NA	NA	False	NA	NA	NA	108637888	108577776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108581110_108584652_108584743_108637649
ES.23964.21	chr4	-	231	2	Antisense	novelGene_ENSMUSG00000094958.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGAGATTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	108582210	108581806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108581855_108582027
ES.23964.22	chr4	-	225	2	Antisense	novelGene_ENSMUSG00000094958.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGGAGAGATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	108582212	108581810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108581847_108582023
ES.23964.23	chr4	-	167	1	Intergenic	novelGene_19645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATCTAAT	NA	False	NA	NA	False	NA	NA	NA	108582026	108581859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108581900_108582000
ES.23964.24	chr4	-	221	1	Intergenic	novelGene_19646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTCATCAGTACCTG	NA	False	NA	NA	False	NA	NA	NA	108586700	108586479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108586500_108586700
ES.23964.25	chr4	-	225	1	Intergenic	novelGene_19647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGTCACAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	108590853	108590628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108590600_108590900
ES.23964.26	chr4	-	3885	2	Antisense	novelGene_ENSMUSG00000094958.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGCCAGGCTGTGGAG	NA	False	NA	NA	False	AAGAAA	-6	NA	108600830	108596748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108600334_108600530
ES.23964.4	chr4	-	4920	20	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	46	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.71227750905861	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTTGTACACTCTTGA	975	False	NA	NA	False	NA	NA	NA	108637654	108494666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108494784_108496408_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637218
ES.23964.5	chr4	-	4776	19	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-134	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.93532734858988	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAACTTTGTACACTCTT	500	False	NA	NA	False	NA	NA	NA	108638129	108494668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108494807_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.6	chr4	-	5282	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	95	1082	95	711	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACAAGGCGTC	729	False	NA	NA	False	AAGAAA	-30	NA	108637900	108495744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.7	chr4	-	5231	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-94	1322	-94	471	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTGTCATGTTTAGAT	540	False	NA	1	True	CATAAA	-37	NA	108638089	108495984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.8	chr4	-	5061	19	NNC	ENSMUSG00000034557.15	novel	6459	19	NA	NA	-94	409	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	6.85745516631532	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCCTGTACAGAACTGG	540	False	NA	-1	True	AATAAA	-20	NA	108638089	108496046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548881_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23964.9	chr4	-	4862	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	-115	1712	-115	81	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTGTTAACACTGT	519	False	NA	NA	False	TTTAAA	-12	NA	108638110	108496374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ES.23965.1	chr4	-	173	1	Intergenic	novelGene_19648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATATATA	NA	False	NA	NA	False	NA	NA	NA	108657124	108656951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108657000_108657100
ES.23966.1	chr4	+	190	1	Intergenic	novelGene_19649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCATGTACTGCTC	NA	False	NA	NA	False	NA	NA	NA	108666413	108666603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108666400_108666600
ES.23967.1	chr4	-	3171	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	290	-2428	280	5	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGTTGTTAAATATAT	NA	False	NA	2	True	ATTAAA	-19	NA	108690471	108671486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.10	chr4	-	2660	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	-8	-462	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	515.895149769365	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTGATCACATTT	NA	False	NA	-21	True	AATAAA	-20	NA	108690769	108671953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902_108688926_108690704
ES.23967.11	chr4	-	2601	6	NNC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-634	-467	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	429.345268985231	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTTGCATTTTGATCA	NA	False	NA	-26	True	AATAAA	-15	NA	108691445	108671958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108691411
ES.23967.12	chr4	-	2996	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-8	-1955	-8	-468	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTTTGCATTTTGATC	NA	False	NA	-27	True	AATAAA	-14	NA	108690769	108671959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.13	chr4	-	2246	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-4	899	-4	-899	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTGTCTTTTCTATTT	NA	False	NA	0	True	AATAAA	-44	NA	108690815	108672390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.14	chr4	-	2581	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-24	-1524	-24	-899	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTGTCTTTTCTATTT	NA	False	NA	0	True	AATAAA	-44	NA	108690785	108672390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.16	chr4	-	4398	4	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-18	-900	intron_retention	FALSE	canonical	3	1029	junction_3	68.5921926234239	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTTGTCTTTTCTATT	NA	False	NA	-1	True	AATAAA	-43	NA	108690779	108672391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.17	chr4	-	2592	7	NIC	ENSMUSG00000028568.17	novel	624	7	NA	NA	-8	-911	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	520.109416907208	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTCTGTTAATTGTTG	NA	False	NA	-12	True	AATAAA	-45	NA	108690769	108672402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108689609_108689649_108690339
ES.23967.18	chr4	-	2166	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	-18	-966	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	515.895149769365	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATAAATAACAGTAA	NA	False	NA	-67	True	TATAAA	-44	NA	108690779	108672457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902_108688926_108690704
ES.23967.19	chr4	-	2068	5	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-9	-966	combination_of_known_splicesites	FALSE	canonical	2	78	junction_4	443.896032309369	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATAAATAACAGTAA	NA	False	NA	-67	True	TATAAA	-44	NA	108690770	108672457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108690704
ES.23967.2	chr4	-	4654	1	Genic_Genomic	ENSMUSG00000028568.17	novel	NA	NA	NA	NA	7237	5	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGTTGTTAAATATAT	NA	False	NA	2	True	ATTAAA	-19	NA	108676140	108671486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_108671500_108676100
ES.23967.20	chr4	-	2217	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	-1	-966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	555.428188177574	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATAAATAACAGTAA	NA	False	NA	-67	True	TATAAA	-44	NA	108690812	108672457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683294_108683411_108687714_108687781_108689609_108689649_108690704
ES.23967.21	chr4	-	1325	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-15	-277	-15	277	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTTTTCCTAACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	108690776	108673637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.22	chr4	-	1025	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-30	2146	-30	277	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTTTTCCTAACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	108690841	108673637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.23	chr4	-	2797	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	-1686	-388	-3	274	multi-exon	FALSE	canonical	3	58	junction_5	429.740852142311	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690814	108673640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902
ES.23967.24	chr4	-	3126	4	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	2	271	intron_retention	FALSE	canonical	3	1029	junction_3	68.5921926234239	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	108690759	108673643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.25	chr4	-	910	6	NNC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-629	270	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	429.345268985231	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTACTTTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	108691440	108673644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108691411
ES.23967.26	chr4	-	959	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	2	270	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	515.895149769365	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTACTTTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	108690759	108673644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902_108688926_108690704
ES.23967.27	chr4	-	866	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-28	2303	-28	120	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108690839	108673794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.28	chr4	-	775	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-39	2405	-39	18	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTCTCGGTCATTTGA	NA	False	NA	NA	False	TATAAA	-31	NA	108690850	108673896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.29	chr4	-	1041	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-7	-1	-7	1	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGCTGTCTGCTCAGC	NA	False	NA	NA	False	TATAAA	-14	NA	108690768	108673913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.3	chr4	-	3206	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-62	-3	-62	3	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGTTGTTAAATAT	NA	False	NA	0	True	ATTAAA	-17	NA	108690873	108671488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.4	chr4	-	4739	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	-1655	-2361	-22	-176	multi-exon	FALSE	canonical	3	58	junction_5	429.740852142311	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTGTCTCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	108690783	108671667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902
ES.23967.5	chr4	-	3005	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-40	176	-40	-176	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTGTCTCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	108690851	108671667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.6	chr4	-	3288	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	-8	-2247	-8	-176	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTGTCTCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	108690769	108671667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ES.23967.7	chr4	-	3826	5	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	-20	-176	intron_retention	FALSE	canonical	3	1008	junction_1	74.9812476556639	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTGTCTCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	108690781	108671667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108674084_108675381_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.8	chr4	-	5131	4	NIC	ENSMUSG00000028568.17	novel	3141	6	NA	NA	23	-176	intron_retention	FALSE	canonical	3	1029	junction_3	68.5921926234239	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTTGTCTCATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	108690788	108671667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108676535_108683296_108683411_108687714_108687781_108690704
ES.23967.9	chr4	-	2716	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	-28	453	-28	-453	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCACATTTTAGTTTCTG	NA	False	NA	-12	True	AATAAA	-29	NA	108690839	108671944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ES.23968.1	chr4	+	3924	2	FSM	ENSMUSG00000073775.5_ENSMUSG00000028567.9	ENSMUST00000147581.2	744	2	-237	-2943	-203	2	multi-exon	FALSE	canonical	3	843	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTCTCTTGATGTAGT	NA	False	NA	11	True	AATAAA	-17	NA	108691594	108706612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108692054_108703147
ES.23968.10	chr4	+	5299	8	Fusion	ENSMUSG00000073775.5_ENSMUSG00000028567.9	novel	511	2	NA	NA	91	-10	multi-exon	FALSE	non_canonical	0	0	junction_1	413.747828158798	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108705072	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_108707168_108707795_108707934_108708135_108710029_108710224_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ES.23968.11	chr4	+	4977	1	NIC	ENSMUSG00000028567.9	novel	1359	7	NA	NA	-351	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108714337	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108714300_108719300
ES.23968.12	chr4	+	3638	2	FSM	ENSMUSG00000028567.9	ENSMUST00000154017.2	511	2	-292	-2835	-292	-10	multi-exon	FALSE	canonical	3	807	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108714396	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108715192_108716471
ES.23968.2	chr4	+	1393	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	-35	1	-35	-1	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGGCCTTTGGTTACTG	NA	False	NA	27	True	ATTAAA	-21	NA	108691762	108719323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ES.23968.3	chr4	+	3299	6	ISM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	58	10	24	-10	intron_retention	FALSE	canonical	3	807	junction_5	25.8255687255867	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108691855	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471
ES.23968.4	chr4	+	1336	7	NNC	ENSMUSG00000028567.9	novel	1359	7	NA	NA	25	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	318.321334852413	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108691856	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718517
ES.23968.5	chr4	+	2568	6	NIC	ENSMUSG00000028567.9	novel	1359	7	NA	NA	27	-10	intron_retention	FALSE	canonical	3	773	junction_5	38.2256458415028	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108691858	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108716556_108718563
ES.23968.6	chr4	+	4560	5	ISM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	80	7	46	-7	intron_retention	FALSE	canonical	3	843	junction_1	14.3701078631999	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTATGGTGGCCTTTGG	NA	False	NA	21	True	ATTAAA	-15	NA	108691877	108719317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121
ES.23968.7	chr4	+	1297	8	NNC	ENSMUSG00000028567.9	novel	1359	7	NA	NA	75	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	378.844429866425	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108691906	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108692054_108703147_108703209_108708561_108708619_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ES.23968.8	chr4	+	2926	6	NIC	ENSMUSG00000028567.9	novel	1359	7	NA	NA	92	-10	intron_retention	FALSE	canonical	3	773	junction_5	36.2138095206787	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	False	NA	18	True	ATTAAA	-12	NA	108691923	108719314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108715192_108716471_108716556_108718563
ES.23968.9	chr4	+	4358	2	Genic_Genomic	ENSMUSG00000073775.5	novel	1629	1	NA	NA	-311	2619	multi-exon	TRUE	non_canonical	0	0	junction_1	0	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCAAGATGGAATATTC	NA	False	NA	NA	False	NA	NA	NA	108704670	108709229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_108707949_108708149
ES.23969.1	chr4	-	156	1	Intergenic	novelGene_19650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTAAAAGTGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	108697115	108696959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108697000_108697100
ES.2397.1	chr10	-	177	1	Intergenic	novelGene_1828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAACTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	18406605	18406428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18406400_18406600
ES.23970.1	chr4	-	2072	1	Antisense	novelGene_ENSMUSG00000073775.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTGGG	NA	False	NA	NA	False	NA	NA	NA	108705841	108703769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_108703800_108705800
ES.23971.1	chr4	-	173	1	Intergenic	novelGene_19651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108707299	108707126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_108707100_108707300
ES.23972.1	chr4	+	1173	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	17	2137	17	-1	multi-exon	FALSE	canonical	3	36	junction_4	5.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTGCTTGTTTCCTAT	NA	False	NA	6	True	ATTAAA	-17	NA	108736276	108798384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
ES.23972.2	chr4	+	536	3	ISM	ENSMUSG00000003411.11	ENSMUST00000106651.9	1078	5	-72	17063	65	-16783	5prime_fragment	FALSE	canonical	3	44	junction_1	1.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGGTTTTAAGATGTT	NA	False	NA	NA	False	AGTAAA	-10	NA	108736324	108781319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108736416_108747504_108747733_108781102
ES.23972.3	chr4	+	174	1	Intergenic	novelGene_19652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAATTGCAAG	NA	False	NA	NA	False	NA	NA	NA	108760808	108760982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108760800_108761000
ES.23973.1	chr4	+	3760	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-58	609	-58	7	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGTGCATTTTATGG	9882	False	NA	46	True	AATAAA	-38	NA	108857793	108918365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.10	chr4	+	4245	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-146	-315	-31	1	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCATCTGCCGTGG	9909	False	NA	21	True	AGTAAA	-23	NA	108857820	108918673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.11	chr4	+	3875	32	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	-31	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	207.06931784632	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9909	False	NA	28	True	AATAAA	-20	NA	108857820	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895254_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.13	chr4	+	7891	31	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	90	junction_2	123.90984177574	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAAGCCATCTGCCGT	9913	False	NA	19	True	AGTAAA	-21	NA	108857824	108918671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.14	chr4	+	4337	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-22	-4	-22	4	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACTTGATTTTCATAC	9918	False	NA	NA	False	AATAAA	-27	NA	108857829	108918978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.15	chr4	+	4283	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-17	-12	intron_retention	FALSE	canonical	1	202	junction_11	90.2814070634454	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACGTGTATTTAAAG	9923	False	NA	27	True	AATAAA	-19	NA	108857834	108918346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108918056_108918132
ES.23973.19	chr4	+	3633	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	135.969281661541	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	9925	False	NA	26	True	AATAAA	-18	NA	108857836	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884696_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.21	chr4	+	4413	2	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-127	43761	-12	-15318	intron_retention	FALSE	canonical	3	601	junction_1	0	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGAAGTCTTGAGTGTC	9928	False	NA	NA	False	ATTAAA	-16	NA	108857839	108874597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108858362_108870706
ES.23973.22	chr4	+	3607	32	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-12	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.811848586216	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	9928	False	NA	26	True	AATAAA	-18	NA	108857839	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108857940_108858026_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.23	chr4	+	4435	29	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-11	intron_retention	FALSE	canonical	0	0	junction_17	139.948838137079	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9929	False	NA	28	True	AATAAA	-20	NA	108857840	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904924_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.24	chr4	+	3668	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	156.171216582599	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTGAAGCAACGTGTAT	9929	False	NA	21	True	AATAAA	-13	NA	108857840	108918340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895254_108896854_108896976_108897052_108897107_108897400_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.26	chr4	+	3684	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	136.023756095111	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	9929	False	NA	26	True	AATAAA	-18	NA	108857840	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904905_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.27	chr4	+	3679	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	135.994285010641	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACGTGTATTTAAAG	9929	False	NA	27	True	AATAAA	-19	NA	108857840	108918346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886063_108889653_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.29	chr4	+	3621	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	135.539631387191	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGACGTGTGTGCA	9929	False	NA	38	True	AATAAA	-30	NA	108857840	108918357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.30	chr4	+	3786	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	135.752491280598	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9929	False	NA	30	True	AATAAA	-22	NA	108857840	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913617_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.31	chr4	+	4758	32	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	-11	7	intron_retention	FALSE	canonical	1	40	junction_2	151.9148263472	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGTGCATTTTATGG	9929	False	NA	46	True	AATAAA	-38	NA	108857840	108918365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.32	chr4	+	3999	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	135.067921185355	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCATCTGCCGTG	9929	False	NA	20	True	AGTAAA	-22	NA	108857840	108918672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897073_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.33	chr4	+	3684	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	133.30731412792	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGCAACGTGTATTTA	9929	False	NA	24	True	AATAAA	-16	NA	108857840	108918343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917272_108917383_108917965_108918056_108918132
ES.23973.34	chr4	+	3619	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	121.458350049186	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9929	False	NA	30	True	AATAAA	-22	NA	108857840	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.36	chr4	+	4774	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-8	4	intron_retention	FALSE	canonical	1	202	junction_11	90.7600094223487	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGTGTGTGCATTTTA	9932	False	NA	43	True	AATAAA	-35	NA	108857843	108918362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.37	chr4	+	5352	32	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	-8	-11	intron_retention	FALSE	non_canonical	0	0	junction_12	169.446905850137	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGAAATTTCCTAAC	9932	False	NA	NA	False	AATAAA	-12	NA	108857843	108918963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895249_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.38	chr4	+	3644	30	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	138.317200803262	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9938	False	NA	28	True	AATAAA	-20	NA	108857849	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904924_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.4	chr4	+	3940	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	-154	-2	-39	2	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGACGTGTGTGCATTT	9901	False	NA	41	True	AATAAA	-33	NA	108857812	108918360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.47	chr4	+	3126	28	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	142.064235166984	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGACGTGTGTGCATTT	9944	False	NA	41	True	AATAAA	-33	NA	108857855	108918360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.48	chr4	+	3922	30	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	138.317200803262	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGCCATCTGCCGTGG	9944	False	NA	21	True	AGTAAA	-23	NA	108857855	108918673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904908_108908061_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.49	chr4	+	3646	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	5	4	combination_of_known_splicesites	FALSE	canonical	1	7	junction_24	134.685399936314	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGTGTGTGCATTTTA	9945	False	NA	43	True	AATAAA	-35	NA	108857856	108918362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.5	chr4	+	1740	15	NNC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.214884276656	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACGTGTGTGCATTTT	9903	False	NA	42	True	AATAAA	-34	NA	108857814	108918361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858126_108904861_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.51	chr4	+	3654	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	155.719552044337	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9948	False	NA	28	True	AATAAA	-20	NA	108857859	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895249_108896854_108896976_108897073_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.52	chr4	+	5046	32	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_2	156.235594132994	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCAAGCCATCTGCCG	9948	False	NA	18	True	AGTAAA	-20	NA	108857859	108918670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871040_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.54	chr4	+	3749	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	10	-13	intron_retention	FALSE	canonical	1	202	junction_11	90.6994750157529	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	9950	False	NA	26	True	AATAAA	-18	NA	108857861	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.55	chr4	+	3555	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	11	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	138.256951153321	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9951	False	NA	30	True	AATAAA	-22	NA	108857862	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.56	chr4	+	3902	32	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.811848586216	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCATCTGCCGTG	9953	False	NA	20	True	AGTAAA	-22	NA	108857864	108918672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108857896_108857989_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.57	chr4	+	3661	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	13	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.622449796812	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGCAACGTGTATTTAA	9953	False	NA	25	True	AATAAA	-17	NA	108857864	108918344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875042_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.59	chr4	+	3396	28	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	14	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	136.235181547785	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9954	False	NA	28	True	AATAAA	-20	NA	108857865	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108918108
ES.23973.61	chr4	+	3701	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	14	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	134.375774933166	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	9954	False	NA	26	True	AATAAA	-18	NA	108857865	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915745_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.62	chr4	+	3414	29	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	14	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.889328523279	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTGTGCATTTTATGG	9954	False	NA	46	True	AATAAA	-38	NA	108857865	108918365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871000_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.63	chr4	+	3861	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	15	-7	intron_retention	FALSE	canonical	1	202	junction_11	91.7789698697083	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTATTTAAAGACGTG	9955	False	NA	32	True	AATAAA	-24	NA	108857866	108918351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.65	chr4	+	3670	30	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	15	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	159.099420004907	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9955	False	NA	30	True	AATAAA	-22	NA	108857866	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895249_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912308_108913696_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.66	chr4	+	4508	29	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	16	-14	intron_retention	FALSE	canonical	0	0	junction_8	187.441364981485	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGCAACGTGTATTTAA	9956	False	NA	25	True	AATAAA	-17	NA	108857867	108918344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.67	chr4	+	2644	20	NNC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	19	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	144.175082082962	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACGTGTATTTAAAG	9959	False	NA	27	True	AATAAA	-19	NA	108857870	108918346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881472_108903845_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.69	chr4	+	4253	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	135.933190289282	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAATTTCCTAACACTT	9959	False	NA	NA	False	AATAAA	-16	NA	108857870	108918967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903862_108904808_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.71	chr4	+	3568	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	20	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	138.037312503836	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9960	False	NA	28	True	AATAAA	-20	NA	108857871	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.72	chr4	+	4090	31	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	205.989592509481	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGCCGTGGCTTTT	9960	False	NA	26	True	AGTAAA	-28	NA	108857871	108918678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890565_108895169_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913617_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.73	chr4	+	4778	32	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	20	-9	intron_retention	FALSE	canonical	0	0	junction_28	178.497801500407	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9960	False	NA	30	True	AATAAA	-22	NA	108857871	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916901_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.74	chr4	+	5433	29	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	22	-11	intron_retention	FALSE	canonical	1	2	junction_21	123.04947569733	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9962	False	NA	28	True	AATAAA	-20	NA	108857873	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913617_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.75	chr4	+	4006	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	22	-17	intron_retention	FALSE	canonical	1	202	junction_11	89.093759481778	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGAAGCAACGTGTATT	9962	False	NA	22	True	AATAAA	-14	NA	108857873	108918341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.77	chr4	+	3536	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	24	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	137.249991065801	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9964	False	NA	28	True	AATAAA	-20	NA	108857875	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.78	chr4	+	3744	32	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	25	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	164.834568472695	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	9965	False	NA	28	True	AATAAA	-20	NA	108857876	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890009_108890095_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.79	chr4	+	6758	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	26	-2473	26	2473	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCTTTGGGTATGGT	9966	False	NA	NA	False	NA	NA	NA	108857877	108921447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.8	chr4	+	3594	29	FSM	ENSMUSG00000053510.13	ENSMUST00000102736.9	4179	29	-31	616	-31	0	multi-exon	FALSE	canonical	0	0	junction_7	139.898300342697	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	9909	False	NA	39	True	AATAAA	-31	NA	108857820	108918358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.80	chr4	+	3669	31	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	38	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	135.979283552884	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	9978	False	NA	30	True	AATAAA	-22	NA	108857889	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891856_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.81	chr4	+	3586	32	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	48	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.488848359701	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGCAACGTGTATTTAA	9988	False	NA	25	True	AATAAA	-17	NA	108857899	108918344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108857960_108858003_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915501_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.84	chr4	+	3682	32	NNC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	156.125133249102	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	NA	False	NA	30	True	AATAAA	-22	NA	108857975	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108874773_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.85	chr4	+	5281	30	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	352	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	137.504175701377	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGACGTGTGTGCA	NA	False	NA	38	True	AATAAA	-30	NA	108858318	108918357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108891240_108891284_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.86	chr4	+	5563	30	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	-1786	1	intron_retention	FALSE	canonical	1	90	junction_1	125.703433330242	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGACGTGTGTGCATT	NA	False	NA	40	True	AATAAA	-32	NA	108872185	108918359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.88	chr4	+	9204	17	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	2183	-13	intron_retention	FALSE	non_canonical	0	0	junction_10	143.972531559843	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	NA	False	NA	26	True	AATAAA	-18	NA	108876154	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108897437_108900572_108900678_108901744_108901869_108903788_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108916266_108916968
ES.23973.89	chr4	+	3451	27	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	2277	-9	intron_retention	FALSE	canonical	1	202	junction_7	93.4166717251959	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACGTGTATTTAAAGACG	NA	False	NA	30	True	AATAAA	-22	NA	108876248	108918349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.9	chr4	+	4042	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	-31	300	-31	2	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCATCTGCCGTGGC	9909	False	NA	22	True	AGTAAA	-24	NA	108857820	108918674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.90	chr4	+	2533	26	NNC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	3229	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.007482861565	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	5474	False	NA	28	True	AATAAA	-20	NA	108884631	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895249_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.92	chr4	+	2439	21	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	37203	-314	-1784	0	3prime_fragment	FALSE	canonical	1	202	junction_1	104.832056166041	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCATCTGCCGTG	NA	False	NA	20	True	AGTAAA	-22	NA	108895169	108918672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.93	chr4	+	2114	21	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	37203	11	-1784	-11	3prime_fragment	FALSE	canonical	1	202	junction_1	104.832056166041	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAACGTGTATTTAAAGA	NA	False	NA	28	True	AATAAA	-20	NA	108895169	108918347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.94	chr4	+	3040	19	NIC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	-1013	4	intron_retention	FALSE	canonical	3	490	junction_1	59.075516643248	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGTGTGTGCATTTTA	NA	False	NA	43	True	AATAAA	-35	NA	108895940	108918362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.95	chr4	+	1822	18	NNC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	-62	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.306874707102	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	NA	False	NA	26	True	AATAAA	-18	NA	108896891	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108896976_108897052_108897099_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.96	chr4	+	1656	16	NNC	ENSMUSG00000053510.13	novel	534	3	NA	NA	71	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.578897188336	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCAACGTGTATTTAAA	NA	False	NA	26	True	AATAAA	-18	NA	108903577	108918345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_108903666_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.97	chr4	+	1811	14	ISM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	46824	-314	1284	0	3prime_fragment	FALSE	canonical	3	548	junction_1	49.1724414086065	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCATCTGCCGTG	NA	False	NA	20	True	AGTAAA	-22	NA	108904790	108918672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ES.23973.98	chr4	+	3935	8	NIC	ENSMUSG00000053510.13	novel	4179	29	NA	NA	-4063	4	intron_retention	FALSE	canonical	3	557	junction_3	45.3710327438653	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGTGTGTGCATTTTA	NA	False	NA	43	True	AATAAA	-35	NA	108908082	108918362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_108908187_108911093_108911222_108912122_108912286_108913486_108915832_108916181_108916266_108916968_108917060_108917265_108918056_108918132
ES.23973.99	chr4	+	3170	1	Genic_Genomic	ENSMUSG00000053510.13	novel	NA	NA	NA	NA	925	1308	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACCCCCCCCCCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	108917112	108920282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_108917100_108920300
ES.23974.1	chr4	+	177	1	Intergenic	novelGene_19653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATCTAAAAAAAA	5788	False	NA	NA	False	NA	NA	NA	108948140	108948317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108948100_108948300
ES.23975.1	chr4	+	3619	1	Antisense	novelGene_ENSMUSG00000028559.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCGTGTATACAGGTA	NA	False	NA	NA	False	AATAAA	-37	NA	108952807	108956426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_108952800_108956400
ES.23976.1	chr4	+	159	1	Intergenic	novelGene_19654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108977279	108977438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_108977300_108977400
ES.23977.1	chr4	+	174	1	Intergenic	novelGene_19655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTAAACATCAT	9680	False	NA	NA	False	NA	NA	NA	109026465	109026639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109026500_109026600
ES.23978.1	chr4	+	2859	1	Intergenic	novelGene_19656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGCATGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	109045008	109047867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109045000_109047900
ES.23978.2	chr4	+	3021	1	Intergenic	novelGene_19657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGGGGGGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	109045008	109048029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109045000_109048000
ES.23979.1	chr4	-	3124	21	NNC	ENSMUSG00000028559.18	novel	3134	21	NA	NA	7	16093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.176031589547	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATAGCAAAGTGACACCC	NA	False	NA	NA	False	NA	NA	NA	108975226	108902248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108902266_108918336_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.10	chr4	-	2802	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	35	-429	-1	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059434	108918846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.11	chr4	-	2616	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	-12	0	-12	0	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108975245	108918846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.12	chr4	-	2502	20	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	-13433	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	112.603734876039	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108988666	108918846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108988626
ES.23979.13	chr4	-	2840	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	36	-5	0	0	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059433	108918846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.15	chr4	-	3186	3	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	52304	0	258	0	intron_retention	FALSE	canonical	3	339	junction_1	3	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108922929	108918846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_108919530_108919661_108919798_108920562
ES.23979.16	chr4	-	4997	11	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	79	0	intron_retention	TRUE	non_canonical	0	0	junction_7	130.462293403113	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975140	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108925732_108929139_108929320_108929366_108930130_108930233_108930347_108959693_108959790_108975091
ES.23979.17	chr4	-	2647	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	-23	510	-9	0	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975242	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.18	chr4	-	2796	20	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.588481671022	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975138	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929518_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.2	chr4	-	3110	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	11	-517	-3	12	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTGACTATTTTATG	NA	False	NA	NA	False	AATACA	-27	NA	108975222	108918329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.20	chr4	-	5005	14	NIC	ENSMUSG00000028559.18	novel	2765	23	NA	NA	-116	0	intron_retention	FALSE	canonical	3	238	junction_13	32.4526054059321	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108946092	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591
ES.23979.21	chr4	-	2858	24	NNC	ENSMUSG00000028559.18	novel	2871	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	123.729520846573	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059430	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109057061_109057127_109059301
ES.23979.22	chr4	-	2862	24	FSM	ENSMUSG00000028559.18	ENSMUST00000194478.6	2903	24	1	40	1	0	multi-exon	FALSE	canonical	1	3	junction_19	122.628536784985	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059430	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108965077_108965147_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.23	chr4	-	2020	14	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.660880670836	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975140	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923062_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108959693_108959790_108975091
ES.23979.24	chr4	-	2560	20	NIC	ENSMUSG00000028559.18	novel	3134	21	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	114.956959306841	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975203	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108959693_108959790_108975091
ES.23979.28	chr4	-	2714	22	NIC	ENSMUSG00000028559.18	novel	2754	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	117.634816756684	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059430	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109029470_109029522_109059301
ES.23979.3	chr4	-	3345	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	38	-512	0	2	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTGCAGTTTATTTGA	NA	False	NA	NA	False	CATAAA	-40	NA	109059431	108918339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.30	chr4	-	4396	18	NIC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	79	0	intron_retention	FALSE	canonical	1	25	junction_15	101.808932925993	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975140	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.32	chr4	-	2481	19	NIC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_13	115.322855978818	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	108975220	108918851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.33	chr4	-	2567	19	NIC	ENSMUSG00000028559.18	novel	2408	23	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	104.524614621286	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATATGTTTCTTTCAT	NA	False	NA	-7	True	CATAAA	-19	NA	109059430	108918852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.36	chr4	-	2894	25	NNC	ENSMUSG00000028559.18	novel	2871	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	129.164563154915	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATATGTTTCTTTC	NA	False	NA	-9	True	CATAAA	-17	NA	109059430	108918854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109057061_109057127_109059301
ES.23979.37	chr4	-	2545	19	NIC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	99.6545421833736	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATATGTTTCTTTC	NA	False	NA	-9	True	CATAAA	-17	NA	108975230	108918854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108959693_108959790_108975091
ES.23979.38	chr4	-	2375	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	-28	257	-28	67	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTTGAGTTTTAGATA	NA	False	NA	NA	False	CATAAA	-20	NA	108975261	108919103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.39	chr4	-	2224	18	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	7	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	91.2116061333513	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATCTTGAGTTTTAGA	NA	False	NA	NA	False	CATAAA	-18	NA	108975212	108919105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944664_108958312_108958361_108959693_108959790_108975091
ES.23979.40	chr4	-	2389	22	NIC	ENSMUSG00000028559.18	novel	2754	23	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	117.634816756684	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTCAGCTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	109059422	108919168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109029470_109029522_109059301
ES.23979.42	chr4	-	2189	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	6	939	6	3	multi-exon	FALSE	canonical	1	25	junction_18	113.002776514562	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGCAGTTACAATTT	NA	False	NA	-3	True	ATTAAA	-24	NA	108975213	108919280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.43	chr4	-	2179	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	-9	434	-9	3	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGCAGTTACAATTT	NA	False	NA	-3	True	ATTAAA	-24	NA	108975242	108919280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.45	chr4	-	2363	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	38	7	0	1	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTGGCAGTTACAAT	NA	False	NA	-5	True	ATTAAA	-22	NA	109059431	108919282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.46	chr4	-	2401	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	39	431	1	1	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTGGCAGTTACAAT	NA	False	NA	-5	True	ATTAAA	-22	NA	109059430	108919282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.47	chr4	-	2667	24	NNC	ENSMUSG00000028559.18	novel	2903	24	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	124.595951895451	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTGGCAGTTACAAT	NA	False	NA	-5	True	ATTAAA	-22	NA	109059421	108919282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108928526_108928841_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.23979.48	chr4	-	2092	20	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	74	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	113.011067533413	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGTGGCAGTTACAAT	NA	False	NA	-5	True	ATTAAA	-22	NA	108975145	108919282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943511_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.49	chr4	-	2139	4	NNC	ENSMUSG00000028559.18	novel	2356	21	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	154.044005256795	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGTGGCAGTTACAA	NA	False	NA	-6	True	ATTAAA	-21	NA	108929200	108919283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108920187_108924424_108925732_108929139
ES.23979.50	chr4	-	2078	20	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	78	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.911718273738	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTCTGTGGCAGTTACA	NA	False	NA	-7	True	ATTAAA	-20	NA	108975141	108919284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923057_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.51	chr4	-	2090	19	NIC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	99.6545421833736	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTTCTCCTCTGTGGC	NA	False	NA	-14	True	ATTAAA	-13	NA	108975212	108919291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108959693_108959790_108975091
ES.23979.52	chr4	-	8604	2	NNC	ENSMUSG00000028559.18	novel	790	9	NA	NA	-6749	-1252	intron_retention	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATGAAAAAAATATATGT	NA	False	NA	NA	False	NA	NA	NA	108936030	108926811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108935154_108935768
ES.23979.7	chr4	-	4782	18	NNC	ENSMUSG00000028559.18	novel	2604	20	NA	NA	74	193	intron_retention	FALSE	non_canonical	0	0	junction_5	117.247291378693	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTTTGGTGCTATAAC	NA	False	NA	NA	False	ATTAAA	-13	NA	108975145	108918618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923062_108923126_108923324_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ES.23979.8	chr4	-	3040	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	49	-218	-6	178	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAACCAGGGCA	NA	False	NA	NA	False	TTTAAA	-8	NA	109059420	108918633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ES.2398.1	chr10	-	1117	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	154	1264	-35	-4	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTTCCTTGCCTCCGC	NA	False	NA	NA	False	AGTAAA	-18	NA	18421670	18416509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ES.23980.1	chr4	+	2045	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16402	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3172754042101	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGCTTGTCTTATTTC	NA	False	NA	2	True	TTTAAA	-19	NA	109075279	109111766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109075543_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ES.23980.2	chr4	+	2092	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16276	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGCTTGTCTTATTTC	NA	False	NA	2	True	TTTAAA	-19	NA	109075405	109111766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ES.23980.3	chr4	+	1781	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16189	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGGTTTTTCTTTTGT	NA	False	NA	NA	False	TATAAA	-17	NA	109075492	109111542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ES.23980.4	chr4	+	174	1	Intergenic	novelGene_19658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	109080252	109080426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109080300_109080400
ES.23981.1	chr4	+	5108	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-53	135	-53	-135	multi-exon	TRUE	canonical	3	117	junction_16	21.9326225188771	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGCTGTTCTTGATCG	NA	False	NA	34	True	AATAAA	-44	NA	109137411	109244879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.10	chr4	+	5314	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-160	-2352	-16	0	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137448	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.11	chr4	+	3879	21	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-15	-3344	intron_retention	FALSE	canonical	3	117	junction_15	22.1437914549428	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTTTCCTATATTTA	NA	False	NA	NA	False	NA	NA	NA	109137449	109236711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461
ES.23981.12	chr4	+	5204	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-14	0	-14	0	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137450	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.13	chr4	+	3016	25	FSM	ENSMUSG00000028552.14	ENSMUST00000176251.8	2963	25	-48	-5	-13	5	multi-exon	FALSE	canonical	2	2	junction_23	38.7344726955202	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCCTGTTCTGGTGTGC	NA	False	NA	2	True	ATTAAA	-12	NA	109137451	109242889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109240043_109240164_109242515
ES.23981.14	chr4	+	3193	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-155	-236	-11	14	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGCATTTATAGT	NA	False	NA	11	True	ATTAAA	-21	NA	109137453	109242898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.15	chr4	+	4965	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-11	-140	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	39.1648158138343	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTTGTGCTGTTCTT	NA	False	NA	29	True	AATAAA	-39	NA	109137453	109244874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.16	chr4	+	2892	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-8	6	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTTCTGGTGTGCA	NA	False	NA	3	True	ATTAAA	-13	NA	109137456	109242890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.17	chr4	+	4774	23	NNC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	47.873110518785	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137459	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218500_109220394_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.18	chr4	+	4950	24	NIC	ENSMUSG00000028552.14	novel	2802	25	NA	NA	4	-162	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	43.6462840301535	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109137468	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.19	chr4	+	960	10	ISM	ENSMUSG00000028552.14	ENSMUST00000132165.9	2295	23	-140	63227	4	9027	5prime_fragment	FALSE	canonical	3	134	junction_9	25.3113940087595	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAAAACGTGT	NA	False	NA	NA	False	AATAAA	-3	NA	109137468	109179435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266
ES.23981.2	chr4	+	5163	24	NIC	ENSMUSG00000028552.14	novel	2802	25	NA	NA	-50	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	43.6462840301535	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTTATCTTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	109137414	109245011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.20	chr4	+	4719	23	NNC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	4	-151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	51.1165416127332	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGCATTGAAACTTT	NA	False	NA	18	True	AATAAA	-28	NA	109137468	109244863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218500_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.21	chr4	+	5143	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	34.280175536053	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137469	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.22	chr4	+	4992	24	NNC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	5	-162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	39.7847231559722	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109137469	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109178295_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.23	chr4	+	5079	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	8	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	39.1648158138343	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACTTTGTTATCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	109137472	109245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.25	chr4	+	4742	20	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	41.3888392091435	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137486	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.27	chr4	+	3270	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-2	329	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGTTTTTAGAACAAT	NA	False	NA	NA	False	AATAAA	-22	NA	109137497	109243309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.28	chr4	+	4795	24	NNC	ENSMUSG00000028552.14	novel	2963	25	NA	NA	0	-167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.9889984308558	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTACTATATCAT	NA	False	NA	2	True	AATAAA	-12	NA	109137499	109244847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170190_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.3	chr4	+	3798	23	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-36	53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.7311903154072	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCCTACTTTTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	109137428	109243816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.31	chr4	+	4938	25	FSM	ENSMUSG00000028552.14	ENSMUST00000176251.8	2963	25	3	-1978	3	-152	multi-exon	FALSE	canonical	2	2	junction_23	38.7344726955202	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTGCATTGAAACTT	NA	False	NA	17	True	AATAAA	-27	NA	109137502	109244862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109240043_109240164_109242515
ES.23981.33	chr4	+	5490	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	10	0	intron_retention	FALSE	canonical	3	117	junction_15	22.1965783565224	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137509	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.34	chr4	+	3439	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	46	1705	11	329	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGTTTTTAGAACAAT	NA	False	NA	NA	False	AATAAA	-22	NA	109137510	109243309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.35	chr4	+	1937	12	NNC	ENSMUSG00000028552.14	novel	2295	23	NA	NA	19	12728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.8574795100323	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATCTCTTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-32	NA	109137518	109183136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109182243
ES.23981.36	chr4	+	4872	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	6	-162	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	34.280175536053	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109137578	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.37	chr4	+	4812	23	ISM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	24480	162	283	-162	3prime_fragment	FALSE	canonical	3	117	junction_14	17.237763656222	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109161944	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.38	chr4	+	176	1	Intergenic	novelGene_19660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTATATCACATGA	NA	False	NA	NA	False	NA	NA	NA	109166783	109166959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109166800_109167000
ES.23981.4	chr4	+	3101	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-34	2123	-34	7	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGTTCTGGTGTGCAT	NA	False	NA	4	True	ATTAAA	-14	NA	109137430	109242891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.40	chr4	+	3911	12	NIC	ENSMUSG00000028552.14	novel	2980	13	NA	NA	-24	-162	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	41.0542877840372	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109200231	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.41	chr4	+	7950	9	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-9060	0	intron_retention	FALSE	canonical	3	117	junction_2	19.1507180022056	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109218684	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109219065_109220375_109220577_109223320_109223438_109223614_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.42	chr4	+	5848	7	NIC	ENSMUSG00000028552.14	novel	2980	13	NA	NA	-4126	-158	intron_retention	FALSE	canonical	3	123	junction_6	17.2046505340853	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATATCATTTTGCATTG	NA	False	NA	11	True	AATAAA	-21	NA	109223618	109244856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109240164_109242515
ES.23981.5	chr4	+	5027	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137445	109245014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.6	chr4	+	5413	23	NIC	ENSMUSG00000028552.14	novel	2802	25	NA	NA	-18	-162	intron_retention	FALSE	canonical	0	0	junction_11	48.4519869698067	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTATATCATTTTGC	NA	False	NA	7	True	AATAAA	-17	NA	109137446	109244852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109200480_109200554_109218359_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.7	chr4	+	5160	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-160	-2198	-16	-154	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTTTGCATTGAAAC	NA	False	NA	15	True	AATAAA	-25	NA	109137448	109244860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23981.8	chr4	+	4872	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	-16	-152	combination_of_known_junctions	FALSE	canonical	3	29	junction_23	34.4426868398588	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTTTGCATTGAAACTT	NA	False	NA	17	True	AATAAA	-27	NA	109137448	109244862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
ES.23981.9	chr4	+	4008	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	-16	1198	-16	53	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGCCCTACTTTTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	109137448	109243816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ES.23982.1	chr4	-	177	1	Intergenic	novelGene_19659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	109157007	109156830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_109156800_109157000
ES.23983.1	chr4	-	2392	4	FSM	ENSMUSG00000085873.2	ENSMUST00000150239.2	796	4	-71	-1525	-71	1510	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTATGAGTCAATGTT	NA	False	NA	NA	False	NA	NA	NA	109263423	109259480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109261191_109261276_109261363_109261708_109261804_109262922
ES.23983.2	chr4	-	3299	4	NNC	ENSMUSG00000085873.2	novel	796	4	NA	NA	-899	1482	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGTTTTAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	109264251	109259508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_109261191_109261276_109261470_109261708_109261804_109262922
ES.23984.1	chr4	+	1952	17	NIC	ENSMUSG00000028555.16	novel	2356	18	NA	NA	1	100	combination_of_known_splicesites	TRUE	canonical	1	2	junction_14	2.97843813936096	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGGTGTTTAAAAAACCA	NA	False	NA	NA	False	AATACA	-14	NA	109264307	109301679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109301278
ES.23984.2	chr4	+	1868	16	NNC	ENSMUSG00000028555.16	novel	2356	18	NA	NA	3	100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.98589275687449	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGGTGTTTAAAAAACCA	NA	False	NA	NA	False	AATACA	-14	NA	109264328	109301679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280148_109286106_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
ES.23985.1	chr4	+	5459	1	Intergenic	novelGene_19661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAAAATACCTTTGCA	NA	False	NA	NA	False	AAAAAG	-6	NA	109302531	109307990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109302500_109308000
ES.23986.1	chr4	-	1606	1	Genic_Genomic	ENSMUSG00000028557.11	novel	NA	NA	NA	NA	25519	1547	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTGTGTGTGTTAC	NA	False	NA	NA	False	ACTAAA	-15	NA	109308353	109306747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_109306700_109308400
ES.23986.10	chr4	-	2368	4	NNC	ENSMUSG00000028557.11	novel	1955	4	NA	NA	160	339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.557301056531	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACAGCTGAAGTTGTGC	NA	False	NA	-14	True	AGTAAA	-7	NA	109333712	109309756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_109309933_109310003_109311620_109314094_109314265_109333306
ES.23986.11	chr4	-	2119	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	306	1636	306	165	multi-exon	FALSE	canonical	3	201	junction_2	15	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAGCAGTCATACATT	NA	False	NA	NA	False	CATAAA	-17	NA	109333566	109309930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.12	chr4	-	2178	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	16	1867	16	-66	multi-exon	FALSE	canonical	3	201	junction_2	15	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATGTGTTTATTTTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	109333856	109310161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.13	chr4	-	1586	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	40	2435	40	-634	multi-exon	FALSE	canonical	3	201	junction_2	15	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGGCTAGCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	109333832	109310729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.14	chr4	-	1414	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-54	2701	-54	485	multi-exon	FALSE	canonical	3	201	junction_2	15	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAGTAGT	NA	False	NA	NA	False	ATTAAA	-25	NA	109333926	109310995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.2	chr4	-	4948	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-11	-876	-11	876	multi-exon	FALSE	canonical	3	201	junction_2	15	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTAATCAGTTGTCT	NA	False	NA	NA	False	AATACA	-13	NA	109333883	109307418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.3	chr4	-	4097	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-32	-4	-32	4	multi-exon	FALSE	canonical	3	201	junction_2	15	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACCAGAGTGGCCTGTG	NA	False	NA	-2	True	AGTAAA	-20	NA	109333904	109308290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.4	chr4	-	3653	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	203	205	203	-205	multi-exon	FALSE	canonical	3	201	junction_2	15	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGCCTGCATGTATG	NA	False	NA	NA	False	NA	NA	NA	109333669	109308499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.5	chr4	-	3692	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	50	319	50	-319	multi-exon	FALSE	canonical	3	201	junction_2	15	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCCATGTGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	109333822	109308613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.6	chr4	-	2961	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-16	1116	-16	685	multi-exon	FALSE	canonical	3	201	junction_2	15	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATGTTCTCCAGAAT	NA	False	NA	NA	False	AATATA	-28	NA	109333888	109309410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.7	chr4	-	2821	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-33	1273	-33	528	multi-exon	FALSE	canonical	3	201	junction_2	15	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTCAGATAGTACTG	NA	False	NA	NA	False	NA	NA	NA	109333905	109309567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23986.8	chr4	-	2706	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	-26	1381	-26	420	multi-exon	FALSE	canonical	3	201	junction_2	15	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGTATTATAGTCAGAC	NA	False	NA	67	True	TTTAAA	-34	NA	109333898	109309675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109311620_109314094_109314265_109333306
ES.23987.1	chr4	-	2083	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	392	-4	392	4	multi-exon	FALSE	canonical	3	20	junction_2	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCTGTGATTTTTTTT	7235	False	NA	NA	False	ATTAAA	-26	NA	109523994	109518068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109518824_109522214_109522355_109522806
ES.23987.2	chr4	-	2493	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	-1388	1	429	-1	multi-exon	FALSE	canonical	3	22	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTTTCCTGTGATTT	7272	False	NA	NA	False	ATTAAA	-21	NA	109523957	109518073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109518824_109522214
ES.23987.3	chr4	-	5108	1	NIC	ENSMUSG00000028551.15	novel	2471	3	NA	NA	-615	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCACATTTTCCTGTGA	8045	False	NA	NA	False	ATTAAA	-18	NA	109523184	109518076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_109518100_109523200
ES.23987.5	chr4	-	1792	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	398	281	398	-281	multi-exon	FALSE	canonical	3	20	junction_2	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTTGTTTTCATATTTT	7241	False	NA	NA	False	ATTAAA	-16	NA	109523988	109518353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109518824_109522214_109522355_109522806
ES.23988.1	chr4	+	148	1	Intergenic	novelGene_19662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	109529534	109529682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109529500_109529700
ES.23989.1	chr4	+	2579	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	-18	1907	-18	-1907	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGTATATGTTCCC	NA	False	NA	30	True	AATAAA	-22	NA	109533766	109819250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.10	chr4	+	2435	20	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	22	-1918	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	307.505764196137	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCCCATCCATGAG	NA	False	NA	19	True	AATAAA	-11	NA	109533806	109819239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534127_109534219_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.11	chr4	+	2935	18	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	23	6548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	316.716632978971	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATGAAGTTTAATAGT	NA	False	NA	NA	False	AATAAA	-18	NA	109533807	109789123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109788255
ES.23989.12	chr4	+	2604	20	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	24	-1909	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	473.817530945805	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533808	109819248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109597849_109597914_109600062_109600160_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.15	chr4	+	2201	16	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	31	-1917	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	339.337629311379	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533815	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109534270_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.16	chr4	+	3745	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	33	690	33	-690	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTCCTGAAATGTTC	NA	False	NA	14	True	AATATA	-20	NA	109533817	109820467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.17	chr4	+	2367	18	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	37	-1909	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	324.617421880335	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533821	109819248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.18	chr4	+	2968	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	38	1462	38	-1462	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCCATCTTGGAGGGGT	NA	False	NA	NA	False	NA	NA	NA	109533822	109819695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.2	chr4	+	3608	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	-4	864	-4	-864	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGACTTCATATATTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	109533780	109820293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.20	chr4	+	2493	19	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	52	-1917	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_10	312.611797286138	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533836	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698511_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.22	chr4	+	5498	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	70	-1100	70	1100	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTAGTCTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	109533854	109822257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.23	chr4	+	1933	13	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	89	101680	89	-63098	5prime_fragment	FALSE	canonical	3	1050	junction_10	100.842148375017	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCAAAGCAAATCTAA	NA	False	NA	NA	False	TTTAAA	-26	NA	109533873	109719477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005
ES.23989.26	chr4	+	2628	20	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	98	-1913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	408.446913180191	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCATCCATGAGTATAT	NA	False	NA	24	True	AATAAA	-16	NA	109533882	109819244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109578160_109578332_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.27	chr4	+	2600	20	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	98	-1917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	408.214862494274	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533882	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109594339_109594487_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.28	chr4	+	1886	14	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	100	-1907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	478.118662699232	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGTATATGTTCCC	NA	False	NA	30	True	AATAAA	-22	NA	109533884	109819250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109600120_109600155_109614776_109614883_109687021_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.3	chr4	+	3430	18	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	-3	-1907	intron_retention	FALSE	canonical	3	1117	junction_7	105.559147230422	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGTATATGTTCCC	NA	False	NA	30	True	AATAAA	-22	NA	109533781	109819250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.30	chr4	+	2379	18	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	103	-1917	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	323.389381460682	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533887	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109534270_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.31	chr4	+	2075	16	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	107	-31561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	326.083397648856	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTCCCATCTTGGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	109533891	109751014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109750763
ES.23989.33	chr4	+	2499	20	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	110	-1910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	408.675958163878	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCCATGAGTATATGTT	NA	False	NA	27	True	AATAAA	-19	NA	109533894	109819247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109605968_109606020_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.35	chr4	+	2428	19	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	112	-1917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	313.477449126905	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533896	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697644_109698520_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.36	chr4	+	2434	19	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	116	-1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	488.20955642803	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533900	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584781_109593792_109593868_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698480_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.39	chr4	+	2183	18	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	134	-1909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	410.27836781915	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533918	109819248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534183_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.4	chr4	+	2741	21	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	-3	-1909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	518.012055844263	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533781	109819248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109597849_109597914_109600062_109600155_109614776_109614883_109651964_109652052_109671504_109671620_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.40	chr4	+	2099	17	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	134	37855	134	727	5prime_fragment	FALSE	canonical	3	1050	junction_10	113.018371708984	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	109533918	109783302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081
ES.23989.41	chr4	+	2211	18	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	134	-1907	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	316.495898834785	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGTATATGTTCCC	NA	False	NA	30	True	AATAAA	-22	NA	109533918	109819250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109818995
ES.23989.42	chr4	+	5628	19	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	-200	-14646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	312.134210608352	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGCTCAGTTATTACAAG	NA	False	NA	NA	False	AATAAA	-13	NA	109533993	109806511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109802980
ES.23989.43	chr4	+	3989	1	Intergenic	novelGene_19663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	719	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCATGTATATGGTTG	NA	False	NA	NA	False	NA	NA	NA	109547323	109551312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109547300_109551300
ES.23989.44	chr4	+	2072	18	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	34196	1917	33787	-1917	3prime_fragment	FALSE	canonical	3	1050	junction_9	119.13732589808	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109567980	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.45	chr4	+	1932	17	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	59597	-1917	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	509.972303169496	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109593790	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109656012_109656152_109657254_109657304_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.46	chr4	+	1590	14	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	65924	-1917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	361.61169471061	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109600117	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109600155_109614786_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.47	chr4	+	1564	13	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	80991	1917	80582	-1917	3prime_fragment	FALSE	canonical	3	1050	junction_4	130.836066850425	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109614775	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.48	chr4	+	2527	1	Intergenic	novelGene_19666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	753	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTATATATTTTGGT	NA	False	NA	NA	False	ATTAAA	-4	NA	109687353	109689880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109687400_109689900
ES.23989.49	chr4	+	177	1	Intergenic	novelGene_19667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	753	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTTAAATCAAATT	NA	False	NA	NA	False	NA	NA	NA	109689356	109689533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109689400_109689500
ES.23989.50	chr4	+	711	5	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	214312	1917	50115	-1917	3prime_fragment	FALSE	canonical	3	1401	junction_1	6.29980158417708	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109748096	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.51	chr4	+	6222	1	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	115036	-1918	mono-exon	FALSE	NA	NA	NA	NA	NA	756	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTCCCATCCATGAG	NA	False	NA	19	True	AATAAA	-11	NA	109813017	109819239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_109813000_109819200
ES.23989.6	chr4	+	7918	18	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	19	22631	19	15951	5prime_fragment	FALSE	canonical	3	1050	junction_10	115.343236835703	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTCTTGGCATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	109533803	109798526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679
ES.23989.7	chr4	+	4033	10	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	20	-89031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	409.387015420692	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAAGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	109533804	109693544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109690768
ES.23989.8	chr4	+	2542	19	NNC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	21	-1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	313.477449126905	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCCCATCCATGAGT	NA	False	NA	20	True	AATAAA	-12	NA	109533805	109819240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698493_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.23989.9	chr4	+	4452	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	22	-6	22	6	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAAAGCCCTTTTTGAA	NA	False	NA	NA	False	ATTAAA	-22	NA	109533806	109821163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ES.2399.1	chr10	+	4248	1	Antisense	novelGene_ENSMUSG00000111173.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18441472	18445720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_18441500_18445700
ES.23990.1	chr4	-	2447	1	FSM	ENSMUSG00000083995.2	ENSMUST00000120597.2	404	1	-1205	-838	-1205	838	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCTAAAATGGAAGACTAC	NA	False	NA	NA	False	NA	NA	NA	109613219	109610772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_109610800_109613200
ES.23991.1	chr4	-	5204	1	Intergenic	novelGene_19664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCCTGATCCCTTATA	NA	False	NA	NA	False	NA	NA	NA	109639974	109634770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_109634800_109640000
ES.23992.1	chr4	-	1280	1	Intergenic	novelGene_19665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAG	6263	False	NA	NA	False	TTTAAA	-17	NA	109655004	109653724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_109653700_109655000
ES.23993.1	chr4	-	910	1	Intergenic	novelGene_19668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTCTTAATTGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	109751561	109750651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_109750700_109751600
ES.23994.1	chr4	-	225	1	Intergenic	novelGene_19669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAGAAGTTATCCTTAA	NA	False	NA	NA	False	NA	NA	NA	109778315	109778090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_109778100_109778300
ES.23995.1	chr4	+	2976	3	NNC	ENSMUSG00000047143.4	novel	2922	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGCTCGAATCCCGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	109835206	109840884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_109835534_109837051_109837618_109838801
ES.23995.2	chr4	+	2092	2	ISM	ENSMUSG00000047143.4	ENSMUST00000061187.4	2922	3	2341	7	2341	-7	3prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGTAACGCTCGAAT	1209	False	NA	NA	False	AATAAA	-12	NA	109837590	109840877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_109837607_109838801
ES.23996.1	chr4	+	3396	3	Intergenic	novelGene_19677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGACTATTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	109862637	109891278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109888379
ES.23996.10	chr4	+	1676	1	Intergenic	novelGene_19679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGCAACATTATGG	NA	False	NA	NA	False	AATAAA	-17	NA	109882642	109884318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109882600_109884300
ES.23996.2	chr4	+	1269	3	Intergenic	novelGene_19672	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTCTTGTGTTACA	NA	False	NA	NA	False	NA	NA	NA	109862637	109879548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109878776
ES.23996.3	chr4	+	953	3	Intergenic	novelGene_19671	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	109862637	109866104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109865648
ES.23996.4	chr4	+	5426	4	Intergenic	novelGene_19675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	20.0388511535855	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGGAGAGATGCCTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	109862637	109883516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109877013_109877203_109878776
ES.23996.5	chr4	+	4588	3	Intergenic	novelGene_19673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGTTGTTAAGTATT	NA	False	NA	NA	False	ATTAAA	-25	NA	109862637	109882867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109878776
ES.23996.6	chr4	+	5448	4	Intergenic	novelGene_19674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	20.2703943940144	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGGCTGGAGAGATGCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	109862637	109883514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109865648_109865862_109878776
ES.23996.7	chr4	+	704	3	Intergenic	novelGene_19670	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTGGGCTAATATCC	NA	False	NA	11	True	NA	NA	NA	109862637	109865855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109865648
ES.23996.8	chr4	+	5246	3	Intergenic	novelGene_19676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	21.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCTGTGATAGCTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	109862637	109883525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109864517_109864840_109878776
ES.23996.9	chr4	+	1103	4	Intergenic	novelGene_19678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAGTGGAGCATGTG	NA	False	NA	NA	False	NA	NA	NA	109862639	109866102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_109862813_109863621_109863776_109864517_109864840_109865648
ES.23997.1	chr4	+	534	1	Intergenic	novelGene_19680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAATCTCA	NA	False	NA	NA	False	TTTAAA	-45	NA	110106151	110106685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_110106200_110106700
ES.23998.1	chr4	-	3919	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-14	90	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGTTTTGCCCCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	110209120	110060828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.10	chr4	-	1503	7	NIC	ENSMUSG00000028546.18	novel	4149	7	NA	NA	-32	251	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.852097798374	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGATGCATTGAATG	NA	False	NA	NA	False	NA	NA	NA	110209138	110063304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063899_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.11	chr4	-	1415	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	11	248	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTTTGATGCATTGA	NA	False	NA	NA	False	NA	NA	NA	110209095	110063307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.12	chr4	-	4312	5	ISM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-14	4229	-14	-1607	5prime_fragment	FALSE	canonical	3	24	junction_1	3.83242742918897	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110209120	110065162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.13	chr4	-	960	1	Intergenic	novelGene_19681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATACAGGAGAACAC	NA	False	NA	NA	False	NA	NA	NA	110179172	110178212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_110178200_110179200
ES.23998.2	chr4	-	3778	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	-17	0	-17	0	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209123	110060933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.3	chr4	-	3835	7	NIC	ENSMUSG00000028546.18	novel	4107	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209141	110060933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.4	chr4	-	3482	5	NIC	ENSMUSG00000028546.18	novel	3761	6	NA	NA	38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.8822346383161	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209068	110060933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110208993
ES.23998.5	chr4	-	3835	6	NIC	ENSMUSG00000028546.18	novel	3761	6	NA	NA	-34	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGCTTCCCAAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	110209140	110060935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063899_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.6	chr4	-	3226	1	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	16184	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGCTTCCCAAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	110064161	110060935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110060900_110064200
ES.23998.7	chr4	-	3869	7	NIC	ENSMUSG00000028546.18	novel	4149	7	NA	NA	-34	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.852097798374	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAATTTGAGCTTCCCA	NA	False	NA	NA	False	AATAAA	-13	NA	110209140	110060940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063899_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.8	chr4	-	3284	7	NIC	ENSMUSG00000028546.18	novel	4149	7	NA	NA	-16	-574	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.852097798374	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTGCTTATTTTGTG	NA	False	NA	-1	True	AATAAA	-17	NA	110209122	110061507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063899_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23998.9	chr4	-	2924	7	NIC	ENSMUSG00000028546.18	novel	3997	7	NA	NA	-19	-895	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.286182749473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTTTATTTTAATGT	NA	False	NA	NA	False	ATTAAA	-9	NA	110209125	110061828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ES.23999.1	chr4	-	175	1	Intergenic	novelGene_19682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	111209800	111209625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_111209600_111209800
ES.24.1	chr1	-	7517	1	Antisense	novelGene_ENSMUSG00000033793.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTACAGAAAGGCAATTCAA	NA	False	NA	NA	False	NA	NA	NA	5192919	5185402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_5185400_5192900
ES.24.2	chr1	-	5280	3	Antisense	novelGene_ENSMUSG00000033793.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTACAGAAAGGCAATTCAA	NA	False	NA	NA	False	NA	NA	NA	5206085	5185402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_5187708_5194496_5194692_5203305
ES.24.3	chr1	-	2131	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAAACCTCATATG	NA	False	NA	NA	False	NA	NA	NA	5202283	5200152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_5200200_5202300
ES.240.1	chr1	+	536	3	ISM	ENSMUSG00000026124.5	ENSMUST00000027298.5	1040	6	1461	1	1461	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCCTTGCTTGGCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	34576189	34583393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34576328_34576406_34576517_34583105
ES.240.2	chr1	+	450	2	ISM	ENSMUSG00000026124.5	ENSMUST00000027298.5	1040	6	1625	2	1625	-2	3prime_fragment	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTCCTTGCTTGGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	34576353	34583392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34576517_34583105
ES.2400.1	chr10	-	5271	1	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	156840	0	156644	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGGAGAGCAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	18462857	18457586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18457600_18462900
ES.2400.2	chr10	-	2691	1	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	157699	1721	157503	-1721	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTATTATTCCACATGA	NA	False	NA	NA	False	AGTAAA	-35	NA	18461998	18459307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18459300_18462000
ES.24000.1	chr4	+	1896	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	-73	-375	9	-1	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACAGTTGTTCTCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	111272211	111317492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
ES.24000.2	chr4	+	1996	10	Fusion	ENSMUSG00000061298.15_ENSMUSG00000028545.14	novel	834	5	NA	NA	9	8	multi-exon	FALSE	canonical	0	0	junction_3	5.51764845241562	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCCTTTGTGTACAT	NA	False	NA	NA	False	AATAAA	-25	NA	111272211	111514715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_111272598_111288213_111288348_111290365_111290751_111383780_111383871_111404379_111404495_111423814_111423927_111472156_111472310_111474316_111474480_111513522_111513620_111514354
ES.24000.3	chr4	+	1375	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	78	-5	-41	-2	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTTTGCATTTTTTTT	NA	False	NA	6	True	AATAAA	-18	NA	111272362	111317122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
ES.24000.4	chr4	+	165	1	Intergenic	novelGene_19684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	111505546	111505711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_111505500_111505700
ES.24001.1	chr4	-	2649	1	Intergenic	novelGene_19683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGTGGAAGTAGACCC	NA	False	NA	NA	False	NA	NA	NA	111302461	111299812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_111299800_111302500
ES.24002.1	chr4	+	2448	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	11	7	11	1	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTACCTCTGGTATTTT	NA	False	NA	13	True	AATAAA	-28	NA	111577191	111686332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.10	chr4	+	1605	10	NNC	ENSMUSG00000034401.17	novel	2415	11	NA	NA	4	6134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.5308960162761	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCATTCTTTTACTC	NA	False	NA	NA	False	NA	NA	NA	111577238	111643602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111643071
ES.24002.12	chr4	+	5451	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-120	-3092	-18	3092	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACACAAAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	111577281	111689473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
ES.24002.13	chr4	+	1316	6	ISM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	60606	85	3214	-35	3prime_fragment	FALSE	canonical	3	19	junction_4	42.8579047551324	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAATTGAAAAT	NA	False	NA	-23	True	AATGAA	-31	NA	111638007	111686296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
ES.24002.14	chr4	+	4682	2	FSM	ENSMUSG00000034401.17	ENSMUST00000132802.2	587	2	-3198	-897	-3198	-35	multi-exon	FALSE	canonical	3	144	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAATTGAAAAT	NA	False	NA	-23	True	AATGAA	-31	NA	111676261	111686296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111680030_111685382
ES.24002.15	chr4	+	1083	2	FSM	ENSMUSG00000034401.17	ENSMUST00000132802.2	587	2	-270	-226	-270	226	multi-exon	FALSE	canonical	3	144	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATTTGTACGCCTTT	NA	False	NA	NA	False	AATGAA	-14	NA	111679189	111685625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111680030_111685382
ES.24002.2	chr4	+	2858	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	11	-403	11	361	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTATGTCAAAATAGAAC	NA	False	NA	NA	False	AATAAA	-16	NA	111577191	111686742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.3	chr4	+	2907	14	NNC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	0	385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.5966828445327	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTCAAGGCATCTCA	NA	False	NA	NA	False	AATAAA	-40	NA	111577206	111686766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625537_111625578_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.4	chr4	+	1785	13	NIC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	1	270	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	31.6318887973654	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGTTGAACCCAGCAT	NA	False	NA	NA	False	TTTAAA	-18	NA	111577207	111685669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625896_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.5	chr4	+	1675	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	-192	756	3	226	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATTTGTACGCCTTT	NA	False	NA	NA	False	AATGAA	-14	NA	111577209	111685625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
ES.24002.7	chr4	+	1703	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	54	709	0	231	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTACGCCTTTCTTTA	NA	False	NA	NA	False	AATGAA	-19	NA	111577234	111685630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.8	chr4	+	2398	13	NNC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.0822607124031	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTACCTCTGGTATTTT	NA	False	NA	13	True	AATAAA	-28	NA	111577235	111686332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625896_111626038_111631995_111632077_111636218_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24002.9	chr4	+	2321	12	NNC	ENSMUSG00000034401.17	novel	2466	13	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.295402070961	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGGTATTTTCATAGG	NA	False	NA	19	True	AATAAA	-34	NA	111577238	111686338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_111577450_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ES.24003.1	chr4	-	4700	1	Intergenic	novelGene_19685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111594157	111589457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_111589500_111594200
ES.24004.1	chr4	+	174	1	Intergenic	novelGene_19686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAGAAAAGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	111821602	111821776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_111821600_111821800
ES.24005.1	chr4	-	187	1	Intergenic	novelGene_19687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGCCCTGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	114365676	114365489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_114365500_114365700
ES.24006.1	chr4	-	3008	3	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	7	14528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTTTCATGTGAAGTT	NA	False	NA	NA	False	NA	NA	NA	114844431	114802004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114804625_114806325_114806445_114844162
ES.24006.10	chr4	-	941	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-14	2243	-14	1532	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTGTTTTTTTTTT	NA	False	NA	NA	False	AATATA	-15	NA	114844452	114818775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ES.24006.11	chr4	-	226	1	Intergenic	novelGene_19688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTTTCACTTATTCTT	NA	False	NA	NA	False	NA	NA	NA	114821357	114821131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_114821100_114821400
ES.24006.2	chr4	-	3162	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	9	-1	9	1	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGTTCTGATATCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	114844429	114816531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ES.24006.3	chr4	-	1915	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	-31	1286	-31	-1286	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAAAATGTTTTC	NA	False	NA	11	True	AATAAA	-30	NA	114844469	114817818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ES.24006.4	chr4	-	3976	5	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	15493	1302	15324	-1302	3prime_fragment	FALSE	canonical	3	519	junction_1	42.4874981612238	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTCTTTCTTTAAAA	NA	False	NA	-5	True	AATAAA	-14	NA	114828945	114817834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414
ES.24006.5	chr4	-	2345	6	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	26	-1304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	234.401023888549	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATTTTCTTTCTTTAA	NA	False	NA	-7	True	AATAAA	-12	NA	114844412	114817836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114843657
ES.24006.6	chr4	-	1886	7	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	23	-1306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	274.555802868723	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGATTTTCTTTCTTT	NA	False	NA	-9	True	AATAAA	-10	NA	114844415	114817838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114827660_114827706_114844162
ES.24006.7	chr4	-	1814	7	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	1	-1347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	275.255891046051	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCTTACTGCTTGC	NA	False	NA	-50	True	AATAAA	-17	NA	114844345	114817879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114840316_114840401_114844162
ES.24006.8	chr4	-	1892	7	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	3	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	275.255891046051	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGATTCCCTTACT	NA	False	NA	-56	True	AATAAA	-11	NA	114844435	114817885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114830459_114830538_114844162
ES.24006.9	chr4	-	1886	7	NNC	ENSMUSG00000028719.9	novel	3170	6	NA	NA	5	-1353	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	271.767465962274	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGATTCCCTTACT	NA	False	NA	-56	True	AATAAA	-11	NA	114844341	114817885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114841992_114842159_114844162
ES.24007.1	chr4	+	175	1	Intergenic	novelGene_19689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	114850898	114851073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_114850900_114851100
ES.24008.1	chr4	+	5361	17	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	-65	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	18.4373940674923	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857290	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869082_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.10	chr4	+	5299	17	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	18.9405938066894	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857359	114900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863860_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.11	chr4	+	5253	18	NNC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	8	-197	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	23.3713810735951	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCAAGTGTTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	114857363	114900196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114877916_114878090_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.12	chr4	+	5457	18	NNC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	23.3713810735951	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857363	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114877916_114878090_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.13	chr4	+	7886	16	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	8	7	intron_retention	FALSE	canonical	3	8	junction_13	18.2042730026649	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857363	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114890069_114895537_114895728_114896264_114896516_114898370
ES.24008.14	chr4	+	7828	14	ISM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	18	5297	-5	-1278	5prime_fragment	FALSE	canonical	3	53	junction_6	11.3486959342598	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAAATGCGCTTATTG	NA	False	NA	NA	False	NA	NA	NA	114857373	114895096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839
ES.24008.17	chr4	+	5282	18	NIC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	2	-192	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	23.4398294690113	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGGGTGTGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	114857380	114900201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114878976_114879191_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.18	chr4	+	6346	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	25	-1086	2	1086	multi-exon	FALSE	canonical	3	47	junction_15	11.7923107892389	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTGTAAGGGACTGG	NA	False	NA	NA	False	AATAAA	-12	NA	114857380	114901479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.20	chr4	+	5481	18	NIC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	23.4398294690113	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857380	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114878976_114879191_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.21	chr4	+	5671	17	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	2	7	intron_retention	FALSE	canonical	0	0	junction_11	19.4679223339318	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857380	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114879191_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.22	chr4	+	4868	15	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	24.0412061227538	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857380	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.23	chr4	+	5569	17	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	2	305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.4373940674923	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTCTGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	114857380	114900698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869082_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.24	chr4	+	5224	17	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	27.1983455379183	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857382	114900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114878976_114879191_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.25	chr4	+	6912	17	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	4	7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	19.4578872182979	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857382	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896971_114897178
ES.24008.26	chr4	+	5348	18	NNC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.3635329366146	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857384	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114886641_114886727_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.27	chr4	+	3394	16	ISM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	29	3717	6	302	5prime_fragment	FALSE	canonical	3	47	junction_15	11.9368709840095	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTCAGTGTGTCGTA	NA	False	NA	NA	False	GATAAA	-23	NA	114857384	114896676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264
ES.24008.29	chr4	+	5361	16	ISM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	2431	-7	2408	7	3prime_fragment	FALSE	canonical	3	47	junction_14	12.032548450857	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114859786	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.3	chr4	+	3180	6	NNC	ENSMUSG00000028718.17	novel	2162	15	NA	NA	-43	-2177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.3215580710794	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCTTAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	114857312	114877009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114865982_114876016
ES.24008.30	chr4	+	6467	11	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	1188	-2	intron_retention	FALSE	canonical	3	47	junction_9	10.4479663092872	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAACTGACTTCTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	114865145	114900391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.32	chr4	+	6022	3	ISM	ENSMUSG00000028718.17	ENSMUST00000141933.8	5368	18	34411	190	18409	-190	3prime_fragment	FALSE	canonical	3	47	junction_1	4	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGGTGTGTTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	114891789	114900203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_114895728_114896264_114896516_114898370
ES.24008.33	chr4	+	178	1	Intergenic	novelGene_19692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	114896979	114897157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_114897000_114897200
ES.24008.5	chr4	+	5214	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	-35	106	-35	-106	multi-exon	FALSE	canonical	3	47	junction_15	11.7923107892389	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	114857320	114900287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.6	chr4	+	5133	17	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.2183732752345	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857351	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114886641_114886727_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.7	chr4	+	5043	16	NIC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	19.0251295805194	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTCTCTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-24	NA	114857356	114900400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ES.24008.9	chr4	+	3688	13	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	4	4321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	21.5797937895616	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTGGCTCCGTGCAT	NA	False	NA	NA	False	NA	NA	NA	114857359	114885064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114883792
ES.24009.1	chr4	-	2546	2	Antisense	novelGene_ENSMUSG00000028718.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGGGTAGCCATGTTAA	NA	False	NA	NA	False	NA	NA	NA	114864807	114861920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_114863990_114864330
ES.24009.2	chr4	-	1186	2	Antisense	novelGene_ENSMUSG00000028718.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGGGTAGCCATGTTAA	NA	False	NA	NA	False	NA	NA	NA	114864807	114861920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_114862175_114863875
ES.24009.3	chr4	-	2887	1	Antisense	novelGene_ENSMUSG00000028718.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGGGTAGCCATGTTAA	NA	False	NA	NA	False	NA	NA	NA	114864807	114861920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_114861900_114864800
ES.2401.1	chr10	+	1594	1	Antisense	novelGene_ENSMUSG00000019852.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTCTTGATCTCTT	5022	False	NA	NA	False	CATAAA	-22	NA	18474988	18476582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_18475000_18476600
ES.24010.1	chr4	-	175	1	Intergenic	novelGene_19690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	114872980	114872805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_114872800_114873000
ES.24011.1	chr4	-	1676	1	Intergenic	novelGene_19691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGGGTTTGATTCCTGG	NA	False	NA	NA	False	NA	NA	NA	114876076	114874400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_114874400_114876100
ES.24012.1	chr4	+	811	5	FSM	ENSMUSG00000028716.16	ENSMUST00000106548.9	887	5	38	38	38	-3	multi-exon	FALSE	canonical	1	1	junction_1	1.87082869338697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGAGACTCTGACCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	114945957	114951058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_114946004_114946235_114946410_114948338_114948448_114950117_114950214_114950672
ES.24012.2	chr4	+	935	4	FSM	ENSMUSG00000028716.16	ENSMUST00000030488.3	1119	4	147	37	147	-2	multi-exon	FALSE	canonical	2	4	junction_3	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGACTCTGACCCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	114946066	114951059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_114946410_114948338_114948448_114950117_114950214_114950672
ES.24013.1	chr4	-	241	1	Intergenic	novelGene_19693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCAGGAAGCAGAGGTA	7759	False	NA	NA	False	AAAAAG	-39	NA	114962755	114962514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_114962500_114962800
ES.24014.1	chr4	+	1604	6	NNC	ENSMUSG00000083190.2	novel	1020	8	NA	NA	7751	624	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.0591260281974	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACCAATTTTCTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	115208735	115220936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115209109_115209506_115209614_115209932_115210125_115212044_115212110_115212228_115212306_115220146
ES.24014.2	chr4	+	1581	6	NNC	ENSMUSG00000083190.2	novel	1020	8	NA	NA	7759	391	intron_retention	FALSE	canonical	2	4	junction_1	2.0591260281974	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGGTAGTAAAACAAGG	NA	False	NA	NA	False	NA	NA	NA	115208743	115220703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115209109_115209506_115209890_115209990_115210125_115212044_115212110_115212228_115212306_115220146
ES.24014.3	chr4	+	1533	7	NNC	ENSMUSG00000083190.2	novel	1020	8	NA	NA	7959	628	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.75378527364305	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTCTTTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	115208943	115220940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115209109_115209506_115209614_115209698_115209890_115209990_115210125_115212044_115212110_115212228_115212306_115220146
ES.24015.1	chr4	+	5798	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	-49	-2957	-49	65	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGGACTGCTTGCT	NA	False	NA	94	True	ATTAAA	-24	NA	115594891	115634589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.10	chr4	+	7493	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-46	7155	-10	-7155	intron_retention	FALSE	canonical	3	178	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAACACACACAAA	NA	False	NA	NA	False	NA	NA	NA	115594930	115603974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115596038_115597588
ES.24015.14	chr4	+	5630	12	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	45.0923753427294	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTGACTAGAATTT	NA	False	NA	28	True	AATAAA	-17	NA	115594944	115634523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115634321_115634369
ES.24015.15	chr4	+	5715	11	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	4	64	intron_retention	FALSE	canonical	0	0	junction_2	47.2801226732757	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTGGACTGCTTGC	NA	False	NA	93	True	ATTAAA	-23	NA	115594944	115634588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603683_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.16	chr4	+	3202	12	NIC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	8	703	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	43.1384471189531	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCTGCTATATTTGT	NA	False	NA	10	True	AATAAA	-18	NA	115594948	115633088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631220_115632257
ES.24015.17	chr4	+	5557	10	NIC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	13	-3	intron_retention	FALSE	canonical	0	0	junction_4	49.1334790690838	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTGACTAGAAT	NA	False	NA	26	True	AATAAA	-15	NA	115594953	115634521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.18	chr4	+	5657	11	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	17	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	47.2801226732757	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTGACTAGAAT	NA	False	NA	26	True	AATAAA	-15	NA	115594957	115634521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597731_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.19	chr4	+	4087	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	30	-1325	-5	572	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCTCTTTAGGTAACT	NA	False	NA	NA	False	AATACA	-13	NA	115594970	115632957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.2	chr4	+	2832	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	-34	-6	-34	6	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATGTCTTTTCTTTGA	NA	False	NA	147	True	NA	NA	NA	115594906	115631638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.20	chr4	+	5601	12	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	45.0923753427294	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTCTGACTAGAAT	NA	False	NA	26	True	AATAAA	-15	NA	115594970	115634521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115633410_115633459
ES.24015.22	chr4	+	2435	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	35	322	0	100	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCAGCCCTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	115594975	115631310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.23	chr4	+	3950	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	36	-1194	0	441	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGTTTTCCTGTGCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	115594976	115632826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.24	chr4	+	4024	12	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	45.0923753427294	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTGTCTGACTAGAA	NA	False	NA	25	True	AATAAA	-14	NA	115594982	115634520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631405_115633018
ES.24015.25	chr4	+	3151	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	-287	1436	6	703	multi-exon	FALSE	canonical	3	13	junction_11	41.468099857422	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTCTGCTATATTTGT	NA	False	NA	10	True	AATAAA	-18	NA	115594982	115633088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ES.24015.26	chr4	+	4706	12	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	237	-1	intron_retention	FALSE	canonical	0	0	junction_4	59.8185962958838	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTGACTAGAATTT	NA	False	NA	28	True	AATAAA	-17	NA	115595999	115634523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115610436_115610519_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.27	chr4	+	9098	1	NIC	ENSMUSG00000034210.15	novel	2792	11	NA	NA	10661	29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCTGAAAAGTGGG	5484	False	NA	NA	False	NA	NA	NA	115606423	115615521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115606400_115615500
ES.24015.28	chr4	+	4193	7	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	18358	2	-10037	-2	intron_retention	FALSE	canonical	3	140	junction_2	8.49346153749394	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGTCTGACTAGAATT	NA	False	NA	27	True	AATAAA	-16	NA	115613627	115634522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.3	chr4	+	11394	9	NIC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	-32	0	intron_retention	FALSE	canonical	3	140	junction_4	12.1963109176505	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	29	True	AATAAA	-18	NA	115594908	115634524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.4	chr4	+	4656	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	-356	0	-27	0	multi-exon	FALSE	canonical	3	13	junction_11	41.468099857422	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	29	True	AATAAA	-18	NA	115594913	115634524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ES.24015.5	chr4	+	2280	2	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-59	12381	-23	-12381	5prime_fragment	FALSE	canonical	3	178	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCTTAGAGAAGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	115594917	115598748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115596038_115597588
ES.24015.6	chr4	+	4325	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	-22	-1511	-22	758	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTCTTTTTTTCTT	NA	False	NA	65	True	CATAAA	-19	NA	115594918	115633143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ES.24015.7	chr4	+	1587	3	ISM	ENSMUSG00000034210.15	ENSMUST00000132306.2	2368	4	-57	7155	-21	-7155	5prime_fragment	FALSE	canonical	3	142	junction_2	18	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAACACACACAAA	NA	False	NA	NA	False	NA	NA	NA	115594919	115603974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115596038_115597588_115597738_115603654
ES.24015.8	chr4	+	4662	12	NIC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	43.1384471189531	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	29	True	AATAAA	-18	NA	115594924	115634524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631220_115632257
ES.24015.9	chr4	+	4085	11	NNC	ENSMUSG00000034210.15	novel	4300	12	NA	NA	-14	702	intron_retention	FALSE	canonical	0	0	junction_10	47.2801226732757	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATTCTGCTATATTTG	NA	False	NA	9	True	AATAAA	-17	NA	115594926	115633087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623670_115631170
ES.24016.1	chr4	+	1950	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	-11	391	-9	52	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAGATTTGCATGATTA	NA	False	NA	4	True	AATAAA	-20	NA	115641999	115669120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ES.24016.10	chr4	+	4009	8	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	17	52	intron_retention	FALSE	non_canonical	0	0	junction_3	142.320420322652	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAGATTTGCATGATTA	NA	False	NA	4	True	AATAAA	-20	NA	115642197	115669120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648418_115648483_115652600_115652652_115653951_115654000_115655162_115657623_115668198
ES.24016.11	chr4	+	1030	8	ISM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	25	11681	25	2627	5prime_fragment	FALSE	canonical	3	354	junction_5	26.2701817462231	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTTCAGTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	115642205	115657830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514
ES.24016.12	chr4	+	927	5	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	26	-3745	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	180.434198532318	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTCCCTGTTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	115642206	115651458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115651049
ES.24016.13	chr4	+	1684	8	NIC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	29	47	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	143.464139016248	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAATCTAGATTTGCAT	NA	False	NA	-1	True	AATAAA	-15	NA	115642209	115669115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115642502_115645458_115645568_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ES.24016.14	chr4	+	3939	8	NIC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	29	41	intron_retention	FALSE	canonical	3	354	junction_4	27.4664916446441	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAGATCAATCTAGAT	NA	False	NA	-7	True	AATAAA	-9	NA	115642209	115669109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115642502_115645458_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ES.24016.15	chr4	+	1794	9	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	49	164	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	133.221385295305	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGTTACACAGCATA	NA	False	NA	NA	False	AATAAA	-16	NA	115642229	115669232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655221_115657514_115657623_115668198
ES.24016.16	chr4	+	6404	1	NIC	ENSMUSG00000028710.19	novel	805	6	NA	NA	50	-6569	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGACATTTAAAACGTG	NA	False	NA	NA	False	AATAAA	-38	NA	115642230	115648634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115642200_115648600
ES.24016.17	chr4	+	4259	17	Fusion	ENSMUSG00000028709.4_ENSMUSG00000028710.19	novel	2655	10	NA	NA	50	-26	multi-exon	FALSE	non_canonical	0	0	junction_9	199.371042280468	262	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGATACAAACTA	NA	False	NA	NA	False	AAGAAA	-20	NA	115642230	115693356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198_115668396_115675963_115676078_115678012_115678175_115678322_115678478_115679780_115679853_115685136_115685191_115688419_115688887_115690829_115691033_115691318
ES.24016.18	chr4	+	177	1	Intergenic	novelGene_19694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115649678	115649855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115649700_115649900
ES.24016.19	chr4	+	2002	1	Intergenic	novelGene_19695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAGAGAGAGATT	6102	False	NA	NA	False	NA	NA	NA	115658421	115660423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115658400_115660400
ES.24016.2	chr4	+	2062	9	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	-5	164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	135.825025308299	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGTTACACAGCATA	NA	False	NA	NA	False	AATAAA	-16	NA	115642003	115669232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655263_115657514_115657623_115668198
ES.24016.20	chr4	+	3042	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	-160	2	-160	-2	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGGTGGGAAGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	115685128	115693380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ES.24016.22	chr4	+	3213	4	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.9443825784929	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGGTGGGAAGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	115685285	115693380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115685439_115688419_115689215_115690829_115691033_115691318
ES.24016.23	chr4	+	5084	3	ISM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	755	26	189	-26	3prime_fragment	FALSE	canonical	3	40	junction_1	10	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGATACAAACTA	NA	False	NA	NA	False	AAGAAA	-20	NA	115686043	115693356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115688887_115690829_115691033_115691318
ES.24016.24	chr4	+	2814	4	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	2180	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9443825784929	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAATAAAAGATACAAAC	NA	False	NA	NA	False	AAGAAA	-18	NA	115688034	115693354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115688143_115688419_115688887_115690829_115691033_115691318
ES.24016.25	chr4	+	2855	4	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	2333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9443825784929	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	115688187	115693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115688309_115688419_115688887_115690829_115691033_115691318
ES.24016.26	chr4	+	3190	3	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	3665	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	115689519	115693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115690443_115690829_115691033_115691318
ES.24016.27	chr4	+	3551	2	ISM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	4253	4	3687	-4	3prime_fragment	FALSE	canonical	3	60	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCACTGGTGGGAAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	115689541	115693378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115691033_115691318
ES.24016.28	chr4	+	1539	2	NNC	ENSMUSG00000028709.4	novel	2884	4	NA	NA	5918	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGATACAAACTA	NA	False	NA	NA	False	AAGAAA	-20	NA	115691772	115693356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115693268_115693312
ES.24016.3	chr4	+	5585	9	NNC	ENSMUSG00000028710.19	novel	2655	10	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	135.825025308299	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	115642012	115671492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115657623_115668198_115668396_115669375
ES.24016.4	chr4	+	4309	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	16	-1995	16	14	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATTGACTTACACATT	NA	False	NA	NA	False	NA	NA	NA	115642026	115671506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ES.24016.5	chr4	+	1739	9	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	-17	43	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	133.221385295305	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGATCAATCTAGATTT	NA	False	NA	-5	True	AATAAA	-11	NA	115642163	115669111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655221_115657514_115657623_115668198
ES.24016.7	chr4	+	1612	8	NNC	ENSMUSG00000028710.19	novel	2330	9	NA	NA	2	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.443000706926	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGATCAATCTAGATTT	NA	False	NA	-5	True	AATAAA	-11	NA	115642182	115669111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655221_115668198
ES.24016.8	chr4	+	3306	7	ISM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	4	11682	4	2626	intron_retention	FALSE	canonical	3	354	junction_5	24.0514494827697	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTCAGTGTACTT	NA	False	NA	NA	False	AATAAA	-19	NA	115642184	115657829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162
ES.24016.9	chr4	+	1221	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	16	923	16	130	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACCTCTCAGCATAA	NA	False	NA	NA	False	NA	NA	NA	115642196	115668588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ES.24017.1	chr4	+	2695	15	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_4	69.0374417786967	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696395	115736447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.10	chr4	+	676	6	ISM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	-3	9141	-1	127	5prime_fragment	FALSE	canonical	3	99	junction_1	32.5613267542955	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGCCCTTGGTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	115696416	115721926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735
ES.24017.11	chr4	+	4100	15	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_2	76.8976260879306	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCAGCCTTGGTGGTC	NA	False	NA	11	True	AATAAA	-17	NA	115696416	115736448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702875_115703379_115703511_115705416_115705560_115712098_115712205_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
ES.24017.12	chr4	+	4880	6	NNC	ENSMUSG00000028708.17	novel	659	8	NA	NA	-1	15	intron_retention	FALSE	canonical	1	2	junction_3	84.5302312785195	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	115696416	115724539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173
ES.24017.13	chr4	+	6793	10	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	0	-2	intron_retention	FALSE	canonical	2	9	junction_8	74.4371472377125	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696417	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407
ES.24017.14	chr4	+	2521	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.7430625533113	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.15	chr4	+	1338	9	NNC	ENSMUSG00000028708.17	novel	1377	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	48.9432068830803	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTTATAGCGTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	115696418	115731067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ES.24017.16	chr4	+	3846	13	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	-2	intron_retention	FALSE	canonical	2	4	junction_1	58.5161421223998	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
ES.24017.17	chr4	+	2272	15	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.1675460564202	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATGTTCTTCCAGCAA	NA	False	NA	NA	False	AATATA	-12	NA	115696418	115736033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721824_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.18	chr4	+	3710	13	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	1	intron_retention	FALSE	canonical	2	4	junction_1	67.7105768859063	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCAGCCTTGGTGGTC	NA	False	NA	11	True	AATAAA	-17	NA	115696418	115736448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777
ES.24017.19	chr4	+	5681	10	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	26	junction_1	46.4088114238856	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115732743_115733777
ES.24017.2	chr4	+	2484	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	50.580432632484	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696407	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115735146
ES.24017.20	chr4	+	3842	12	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	24	2	1	-2	intron_retention	FALSE	canonical	3	99	junction_1	25.6792034067123	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
ES.24017.21	chr4	+	2533	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.5203709347734	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702875_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.22	chr4	+	2686	13	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	48.7313354583635	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115696418	115736446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705248_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.23	chr4	+	2378	13	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	47.2622705995197	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696418	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.24	chr4	+	1480	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	56.0877289015461	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTGGCAGCCTTGGT	NA	False	NA	7	True	AATAAA	-13	NA	115696419	115736444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115736141
ES.24017.25	chr4	+	2476	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.5606593255112	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696419	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.26	chr4	+	4489	13	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	76.880273080218	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115696420	115736446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115702818_115702863_115705416_115705560_115714226_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407_115730504_115731816_115732743_115733777
ES.24017.27	chr4	+	1570	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.8045812127126	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696426	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115702818_115702875_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115736141
ES.24017.28	chr4	+	5435	10	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	32	2	-3	-2	intron_retention	FALSE	canonical	3	99	junction_1	27.3242984164391	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696426	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816
ES.24017.29	chr4	+	3427	12	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	32	409	-3	177	intron_retention	FALSE	canonical	3	99	junction_1	25.6792034067123	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCTTCCAGCAATCATA	NA	False	NA	NA	False	AATATA	-17	NA	115696426	115736038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777
ES.24017.3	chr4	+	6727	9	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	26	junction_1	48.9432068830803	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696407	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ES.24017.30	chr4	+	2545	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	-2	9	-2	-9	multi-exon	FALSE	canonical	3	11	junction_1	55.5404857930697	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGCCTGTGGCAGC	NA	False	NA	1	True	AATAAA	-7	NA	115696427	115736438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.31	chr4	+	2733	15	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	68.6372080327472	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696427	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.32	chr4	+	3075	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	99	junction_1	28.8280740119709	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115696427	115736446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732743_115733777_115733822_115735146
ES.24017.33	chr4	+	2270	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	48.1959756723102	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696427	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146_115735462_115735699
ES.24017.34	chr4	+	4378	11	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_9	54.1406501623318	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696427	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115732734_115733777_115733822_115735146
ES.24017.35	chr4	+	4867	11	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	34	2	-1	-2	intron_retention	FALSE	canonical	3	99	junction_1	26.0875449209005	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696428	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577
ES.24017.36	chr4	+	1368	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	9	0	-1	0	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTTATAGCGTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	115696428	115731067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ES.24017.37	chr4	+	3215	8	NIC	ENSMUSG00000028708.17	novel	1377	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	99	junction_1	28.6698305483913	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTTATAGCGTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	115696430	115731067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115723764_115727507_115727564_115730407
ES.24017.38	chr4	+	2362	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.1239785246592	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696430	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.39	chr4	+	2704	15	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	68.276149957809	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGCCTTGGTGGTCCTT	NA	False	NA	14	True	AATAAA	-20	NA	115696430	115736451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115702818_115702863_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.4	chr4	+	2532	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	13	-2	-10	2	multi-exon	FALSE	canonical	3	99	junction_1	27.9607860325055	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696407	115736449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.40	chr4	+	2404	14	NIC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	64.2884586621873	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696438	115736447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.41	chr4	+	2433	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	65.3666038540192	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696439	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.42	chr4	+	5345	9	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_5	57.6897683736033	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696442	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115723658_115723764_115727507_115727564_115730407_115730504_115731816
ES.24017.43	chr4	+	5565	11	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	5	-2	intron_retention	FALSE	canonical	1	2	junction_3	64.4093160963536	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696445	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816
ES.24017.44	chr4	+	2448	14	NNC	ENSMUSG00000028708.17	novel	2552	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.455484054717	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696457	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115718475_115718585_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.45	chr4	+	3202	12	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	8244	0	8217	0	3prime_fragment	FALSE	canonical	3	106	junction_11	24.3565118484049	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115704673	115736447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.46	chr4	+	2536	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-8814	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	58.9723923167066	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115705414	115736446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24017.47	chr4	+	8095	5	ISM	ENSMUSG00000028708.17	ENSMUST00000152888.8	1686	10	4203	-584	4129	-2	intron_retention	FALSE	canonical	3	139	junction_4	11.9660979437743	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115718431	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ES.24017.48	chr4	+	1993	7	ISM	ENSMUSG00000028708.17	ENSMUST00000152888.8	1686	10	7505	-585	-1730	-1	3prime_fragment	FALSE	canonical	2	3	junction_6	56.9902525778654	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCAGCCTTGGTGG	NA	False	NA	9	True	AATAAA	-15	NA	115721733	115736446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115735146
ES.24017.49	chr4	+	3923	4	ISM	ENSMUSG00000028708.17	ENSMUST00000150201.8	788	10	15167	-2638	-2498	-2	3prime_fragment	FALSE	canonical	3	12	junction_1	66.0420741312351	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115729469	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115730504_115731955_115732012_115732577_115732743_115733777
ES.24017.5	chr4	+	4367	11	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	26	junction_1	45.7947595255178	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696407	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115732743_115733777_115733822_115735146
ES.24017.6	chr4	+	2463	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.8956983084295	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCCTGTGGCAGCCTT	NA	False	NA	4	True	AATAAA	-10	NA	115696408	115736441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714230_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115731994_115732577_115732743_115733777_115733822_115735146
ES.24017.7	chr4	+	4623	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	2	junction_3	71.9222187891583	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTGGCAGCCTTGG	NA	False	NA	6	True	AATAAA	-12	NA	115696414	115736443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696479_115705416_115705560_115713764_115713914_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115729427_115729504_115730407_115732743_115733777_115733822_115735146
ES.24017.8	chr4	+	4415	11	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-2	2	intron_retention	FALSE	canonical	3	99	junction_1	26.6925083122587	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCCTTGGTGGTCC	NA	False	NA	12	True	AATAAA	-18	NA	115696415	115736449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732743_115733777
ES.24017.9	chr4	+	2405	12	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.9884426276568	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGGCAGCCTTGGTG	NA	False	NA	8	True	AATAAA	-14	NA	115696416	115736445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ES.24018.1	chr4	-	6722	5	NNC	ENSMUSG00000028707.16	novel	5799	4	NA	NA	-44	35911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.11803398874989	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGGTGATTGTGGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	115797167	115736404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115742353_115777170_115777514_115777729_115777909_115780845_115781012_115797081
ES.24018.2	chr4	-	3379	1	Antisense	novelGene_ENSMUSG00000034185.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCACTCGGGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	115755737	115752358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_115752400_115755700
ES.24018.3	chr4	-	4082	5	FSM	ENSMUSG00000028707.16	ENSMUST00000124071.9	4017	5	-65	0	-65	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGATCCATCTTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	115797188	115772315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115775603_115777170_115777514_115777729_115777909_115780845_115781012_115797081
ES.24018.4	chr4	-	4046	5	FSM	ENSMUSG00000028707.16	ENSMUST00000084338.7	4031	5	-17	2	-17	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	1.08972473588517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCTTGATCCATCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	115797140	115772318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115775603_115777170_115777514_115777729_115777924_115780845_115781012_115797081
ES.24018.5	chr4	-	3864	5	FSM	ENSMUSG00000028707.16	ENSMUST00000124071.9	4017	5	-44	197	-44	-196	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTGTATTGTATTTATT	NA	False	NA	NA	False	AAAACA	-4	NA	115797167	115772512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115775603_115777170_115777514_115777729_115777909_115780845_115781012_115797081
ES.24018.6	chr4	-	1520	5	FSM	ENSMUSG00000028707.16	ENSMUST00000124071.9	4017	5	-10	2507	-10	-2506	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAATATATAAAACT	NA	False	NA	NA	False	NA	NA	NA	115797133	115774822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115775603_115777170_115777514_115777729_115777909_115780845_115781012_115797081
ES.24019.1	chr4	+	383	1	Intergenic	novelGene_19697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACTGCGAGAAGGT	4440	False	NA	NA	False	NA	NA	NA	115804682	115805065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115804700_115805100
ES.24019.2	chr4	+	199	1	Intergenic	novelGene_19696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTGCTCTCAAGGGG	4440	False	NA	NA	False	NA	NA	NA	115804682	115804881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115804700_115804900
ES.2402.1	chr10	-	3052	2	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	152195	5507	151999	2057	3prime_fragment	FALSE	canonical	3	10	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTACCTGCAATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	18467502	18463093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18465521_18466877
ES.2402.2	chr10	-	5049	16	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	118508	6147	118312	1417	3prime_fragment	FALSE	canonical	1	1	junction_5	2.28619042659763	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCATTATTCAGCACAT	NA	False	NA	NA	False	NA	NA	NA	18501189	18463733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18465521_18466877_18468091_18470655_18470778_18473075_18473208_18473443_18473547_18474933_18475049_18476181_18476359_18479154_18479284_18483392_18483538_18484068_18484173_18486951_18487075_18488885_18489031_18492596_18492777_18495395_18495542_18496873_18497008_18500895
ES.2402.3	chr10	-	4154	1	NIC	ENSMUSG00000019852.8	novel	14579	34	NA	NA	151589	1392	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18467912	18463758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_18463800_18467900
ES.2402.5	chr10	-	2238	2	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	151577	6939	151381	625	3prime_fragment	FALSE	canonical	3	10	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTGTTGCACAGATAT	NA	False	NA	NA	False	AAGAAA	-21	NA	18468120	18464525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18465521_18466877
ES.2402.6	chr10	-	1407	2	ISM	ENSMUSG00000019852.8	ENSMUST00000215836.2	14579	34	151863	7484	151667	80	3prime_fragment	FALSE	canonical	3	10	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCTTGCAGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	18467834	18465070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_18465521_18466877
ES.2402.7	chr10	-	3269	14	NNC	ENSMUSG00000019852.8	novel	5606	33	NA	NA	118531	-4093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.64622573531021	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGACTTCCCTTCTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	18500970	18469243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_18470778_18473075_18473208_18473443_18473547_18474933_18475049_18476154_18476359_18479154_18479284_18483392_18483538_18484068_18484173_18486951_18487075_18488885_18489031_18492596_18492777_18495395_18495542_18496873_18497008_18500895
ES.24020.1	chr4	-	175	1	Intergenic	novelGene_19698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCTGATCT	NA	False	NA	NA	False	NA	NA	NA	115832193	115832018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_115832000_115832200
ES.24021.1	chr4	-	3648	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	178	1	-21	-1	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAGAGTGAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115874945	115853866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.11	chr4	-	2102	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	200	1525	1	-1	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGGGTATTTTTC	NA	False	NA	NA	False	AAAAAG	-14	NA	115874923	115855390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.12	chr4	-	2771	14	FSM	ENSMUSG00000034171.14	ENSMUST00000150668.8	2802	14	30	1	0	-1	multi-exon	FALSE	canonical	3	38	junction_1	8.4538426541604	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGGGTATTTTTC	NA	False	NA	NA	False	AAAAAG	-14	NA	115874894	115855390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.2	chr4	-	3715	14	NNC	ENSMUSG00000034171.14	novel	3827	15	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_11	15.6572005478017	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAGAGTGAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115874879	115853866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862560_115862783_115862919_115865376_115865491_115874659
ES.24021.4	chr4	-	5476	6	NIC	ENSMUSG00000034171.14	novel	5537	12	NA	NA	-5279	-4	intron_retention	FALSE	canonical	3	42	junction_5	8.55569985448298	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGATAAGAGTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	115862544	115853869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115860300_115861551
ES.24021.5	chr4	-	2690	14	NIC	ENSMUSG00000034171.14	novel	3827	15	NA	NA	-8	403	intron_retention	FALSE	canonical	3	42	junction_7	7.8980186265197	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874902	115854986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.6	chr4	-	2993	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	-288	1122	-288	402	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTGGCTGGGATAT	NA	False	NA	NA	False	NA	NA	NA	115875411	115854987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.7	chr4	-	2748	14	NIC	ENSMUSG00000034171.14	novel	3827	15	NA	NA	3	402	intron_retention	FALSE	canonical	3	38	junction_1	8.4538426541604	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTGGCTGGGATAT	NA	False	NA	NA	False	NA	NA	NA	115874921	115854987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.8	chr4	-	3758	14	NIC	ENSMUSG00000034171.14	novel	3827	15	NA	NA	1	401	intron_retention	FALSE	canonical	3	38	junction_1	8.63322329021428	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGCTGGCTGGGATA	NA	False	NA	NA	False	NA	NA	NA	115874923	115854988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24021.9	chr4	-	2597	15	NNC	ENSMUSG00000034171.14	novel	3827	15	NA	NA	1	400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.4255512358421	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTGGCTGGCTGGGAT	NA	False	NA	NA	False	NA	NA	NA	115874923	115854989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857885_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861948_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ES.24022.1	chr4	+	272	1	Intergenic	novelGene_19699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGACAAGCATCACATGTC	NA	False	NA	NA	False	NA	NA	NA	115899065	115899337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115899100_115899300
ES.24022.2	chr4	+	157	1	Intergenic	novelGene_19700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCAATC	NA	False	NA	NA	False	NA	NA	NA	115899067	115899224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115899100_115899200
ES.24023.1	chr4	-	2355	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	67	17	67	-17	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCAAAGGTTAAGACATC	NA	False	NA	NA	False	ATTAAA	-21	NA	115911006	115890055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.10	chr4	-	1559	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	13	867	13	198	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGTCTAAGTTCTATT	NA	False	NA	0	True	AATAAA	-44	NA	115911060	115890905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.11	chr4	-	2991	2	ISM	ENSMUSG00000028706.15	ENSMUST00000030474.12	1984	5	10324	731	8794	171	3prime_fragment	FALSE	canonical	3	121	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGGGCCTGCAGTTGG	NA	False	NA	-27	True	AATAAA	-17	NA	115895363	115890932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_115891509_115892948
ES.24023.12	chr4	-	1675	7	NIC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	44	170	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	66.4490197235612	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGGGCCTGCAGTTG	NA	False	NA	-28	True	AATAAA	-16	NA	115911029	115890933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115891509_115892948_115893074_115897265_115897427_115898074_115898305_115900297_115900398_115905526_115905862_115910880
ES.24023.13	chr4	-	1128	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	73	1238	73	-173	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGACCTATGTACTT	NA	False	NA	NA	False	NA	NA	NA	115911000	115891276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.2	chr4	-	2267	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	14	158	14	5	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGTGCCTTGTCAAT	NA	False	NA	-1	True	AGTAAA	-22	NA	115911059	115890196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.3	chr4	-	6429	5	NIC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	39	0	intron_retention	FALSE	canonical	3	114	junction_2	16.6508258053467	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGCGTGCCTTG	NA	False	NA	-6	True	AGTAAA	-17	NA	115911034	115890201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115891509_115892948_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.4	chr4	-	2330	7	NIC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	44	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	61.1655313246131	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115911029	115890203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115891509_115892948_115893074_115897265_115897427_115900297_115900398_115901881_115902037_115905526_115905862_115910880
ES.24023.5	chr4	-	5219	7	NNC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	64	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	61.1893690839258	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115911009	115890203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902120_115902151_115902403_115902851_115905862_115910880
ES.24023.6	chr4	-	3891	6	NNC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	-504	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	57.0487510818598	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115904661	115890203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902120_115902247_115903112_115903463
ES.24023.7	chr4	-	2279	7	NNC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	85	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.6225067108872	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115910988	115890203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115891509_115892948_115893074_115894847_115894938_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ES.24023.8	chr4	-	3825	5	NIC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	142	-2	intron_retention	FALSE	canonical	0	0	junction_3	58.3068392214841	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGTGCGTGCCT	NA	False	NA	-8	True	AGTAAA	-15	NA	115904015	115890203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115891509_115892948_115893074_115897265_115897427_115900297_115900398_115901881
ES.24023.9	chr4	-	5045	7	NNC	ENSMUSG00000028706.15	novel	2439	6	NA	NA	76	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	66.0666750756806	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGTGTGCGTGC	NA	False	NA	-10	True	AGTAAA	-13	NA	115910997	115890205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115891509_115892948_115893074_115901881_115902120_115902151_115902216_115902279_115903119_115903502_115905862_115910880
ES.24024.1	chr4	-	172	1	Intergenic	novelGene_19701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	115912520	115912348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_115912300_115912500
ES.24025.1	chr4	+	1226	3	Genic_Genomic	ENSMUSG00000078238.5	novel	297	1	NA	NA	-7689	516	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATTAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	115916775	115925277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_115916820_115921924_115922032_115924202
ES.24026.1	chr4	-	178	1	Intergenic	novelGene_19702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	115922583	115922405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_115922400_115922600
ES.24027.1	chr4	-	591	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	-43	-1	-43	1	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCCTTCCTTTGCCA	7614	False	NA	-6	True	AATAAA	-18	NA	115932311	115924160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ES.24027.2	chr4	-	5381	2	FSM	ENSMUSG00000063882.13	ENSMUST00000142468.2	423	2	-4958	0	-2	0	multi-exon	FALSE	canonical	3	1072	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7692	False	NA	-8	True	AATAAA	-16	NA	115932233	115924162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115924370_115927059
ES.24027.3	chr4	-	347	3	NIC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	508	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7694	False	NA	-8	True	AATAAA	-16	NA	115932231	115924162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115924370_115927933_115927955_115932112
ES.24027.4	chr4	-	501	3	NNC	ENSMUSG00000063882.13	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	536	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7694	False	NA	-8	True	AATAAA	-16	NA	115932231	115924162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115924370_115927059_115927222_115932099
ES.24027.5	chr4	-	3201	3	NIC	ENSMUSG00000063882.13	novel	547	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1017	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7692	False	NA	-8	True	AATAAA	-16	NA	115932233	115924162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115927222_115927933_115927955_115932112
ES.24027.6	chr4	-	580	4	FSM	ENSMUSG00000063882.13	ENSMUST00000134760.2	579	4	-2	1	-2	0	multi-exon	FALSE	canonical	3	10	junction_2	488.184618993903	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTCCTTCCTTTGC	7692	False	NA	-8	True	AATAAA	-16	NA	115932233	115924162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115924370_115927059_115927222_115927864_115927955_115932112
ES.24027.8	chr4	-	3356	1	NIC	ENSMUSG00000063882.13	novel	402	4	NA	NA	-245	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTTGTCCTTCCTTT	NA	False	NA	-10	True	AATAAA	-14	NA	115927520	115924164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115924200_115927500
ES.24028.1	chr4	+	3270	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	-141	-64	-141	64	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCTTTCCCTGTATCCT	NA	False	NA	73	True	AATAAA	-28	NA	115932324	115954304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ES.24028.2	chr4	+	2847	10	NNC	ENSMUSG00000028703.15	novel	3065	10	NA	NA	-75	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.376068887804	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGCAGCCCTTCTTGA	NA	False	NA	4	True	AATAAA	-12	NA	115932584	115954235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953613
ES.24028.3	chr4	+	3415	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	120	-470	-74	470	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGAGAAAAGTGGCGCT	NA	False	NA	NA	False	AGTAAA	-16	NA	115932585	115954710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ES.24028.4	chr4	+	5724	9	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	185	-2740	-9	2740	intron_retention	FALSE	canonical	3	193	junction_3	25.7047539377447	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAATCAACCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	115932650	115956980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339
ES.24028.6	chr4	+	2942	10	NNC	ENSMUSG00000028703.15	novel	305	3	NA	NA	351	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.7007320373696	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115933092	115954240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115933309_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ES.24028.7	chr4	+	3129	10	NNC	ENSMUSG00000028703.15	novel	305	3	NA	NA	358	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.3961176910551	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCATGCAGCCCTTCT	NA	False	NA	1	True	AATAAA	-9	NA	115933099	115954232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115933511_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ES.24028.8	chr4	+	3035	10	NNC	ENSMUSG00000028703.15	novel	305	3	NA	NA	503	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.3961176910551	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	NA	False	NA	6	True	AATAAA	-14	NA	115933244	115954237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_115933557_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ES.24029.1	chr4	+	178	1	Intergenic	novelGene_19703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	115965210	115965388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115965200_115965400
ES.2403.1	chr10	+	157	1	Intergenic	novelGene_1829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	18521094	18521251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_18521100_18521300
ES.24030.2	chr4	+	2544	2	Antisense	novelGene_ENSMUSG00000028702.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTCAAAAATGTATGAAAG	NA	False	NA	NA	False	NA	NA	NA	115977278	115980017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_115979489_115979683
ES.24030.3	chr4	+	1313	2	Antisense	novelGene_ENSMUSG00000028702.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTCAAAAATGTATGAAAG	NA	False	NA	NA	False	NA	NA	NA	115977280	115980017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_115978253_115979676
ES.24030.4	chr4	+	1285	2	Antisense	novelGene_ENSMUSG00000028702.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115977282	115979992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_115978240_115979664
ES.24031.1	chr4	-	4126	20	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	4972	intron_retention	FALSE	non_canonical	0	0	junction_1	157.194640890374	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGACGGGTGCGGGG	NA	False	NA	NA	False	AATAAA	-35	NA	115980867	115946488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115948405_115948528_115953489_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.10	chr4	-	3351	10	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-557	4952	intron_retention	FALSE	canonical	0	0	junction_2	219.013670017013	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAGACTCTGCACCA	6409	False	NA	NA	False	AATAAA	-15	NA	115957812	115946508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946819_115948405_115949008_115952995_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735
ES.24031.11	chr4	-	2864	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	4951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.935159543742	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTCAGACTCTGCACC	NA	False	NA	NA	False	AATAAA	-14	NA	115980868	115946509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115954447_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.12	chr4	-	4524	1	Antisense	novelGene_ENSMUSG00000028703.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTTCCTAACACTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	115951448	115946924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_115946900_115951400
ES.24031.14	chr4	-	5951	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	21	-3192	-5	540	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGAGGGCTAGAAATATA	NA	False	NA	NA	False	NA	NA	NA	115980861	115950920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.15	chr4	-	5940	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-1	529	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGATAGAGGG	NA	False	NA	NA	False	NA	NA	NA	115980883	115950931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.16	chr4	-	5440	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	2	-2662	2	10	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTTGCTGTGTAAA	NA	False	NA	-2	True	AATAAA	-30	NA	115980880	115951450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.17	chr4	-	5418	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	2	10	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTTGCTGTGTAAA	NA	False	NA	-2	True	AATAAA	-30	NA	115980880	115951450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.18	chr4	-	5671	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	3	9	intron_retention	FALSE	canonical	1	19	junction_18	118.034272591366	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTTTGCTGTGTAA	NA	False	NA	-3	True	AATAAA	-29	NA	115980879	115951451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.19	chr4	-	5572	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	9	intron_retention	FALSE	canonical	3	30	junction_18	115.743916993454	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTTTGCTGTGTAA	NA	False	NA	-3	True	AATAAA	-29	NA	115980867	115951451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980697
ES.24031.2	chr4	-	5169	1	Genic_Genomic	ENSMUSG00000028702.16	novel	NA	NA	NA	NA	5586	4960	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCACCAGACCCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	115951669	115946500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_115946500_115951700
ES.24031.20	chr4	-	5486	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	4	intron_retention	FALSE	canonical	0	0	junction_18	122.011636765404	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGGGGTTGTTTGCTG	NA	False	NA	-8	True	AATAAA	-24	NA	115980867	115951456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980610
ES.24031.21	chr4	-	5596	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	7	3	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGGGGTTGTTTGCT	NA	False	NA	-9	True	AATAAA	-23	NA	115980875	115951457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.22	chr4	-	5351	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-6	3	intron_retention	FALSE	canonical	2	2	junction_13	146.481417099766	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGGGGTTGTTTGCT	NA	False	NA	-9	True	AATAAA	-23	NA	115980862	115951457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967912_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.23	chr4	-	5765	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-26	-2714	0	3	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGGGGTTGTTTGCT	NA	False	NA	-9	True	AATAAA	-23	NA	115980882	115951457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.24	chr4	-	5517	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	11	3	intron_retention	FALSE	canonical	2	16	junction_18	118.660528347274	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCAGGGGTTGTTTGCT	NA	False	NA	-9	True	AATAAA	-23	NA	115980845	115951457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980724
ES.24031.26	chr4	-	5490	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-10	1	intron_retention	FALSE	canonical	3	16	junction_18	140.349583327369	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCAGGGGTTGTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	115980866	115951459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980675
ES.24031.27	chr4	-	5335	18	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	1	intron_retention	FALSE	canonical	2	3	junction_14	149.947787914147	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCAGGGGTTGTTTG	NA	False	NA	-11	True	AATAAA	-21	NA	115980867	115951459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.28	chr4	-	5820	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_16	160.755555939545	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACTCCTCAGGGGTTG	NA	False	NA	-15	True	AATAAA	-17	NA	115980882	115951463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115978769_115978831_115980092_115980180_115980258
ES.24031.29	chr4	-	6067	17	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	8	-6	intron_retention	FALSE	canonical	3	379	junction_10	50.2129449818471	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGACTCCTCAGGGG	NA	False	NA	-18	True	AATAAA	-14	NA	115980874	115951466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.3	chr4	-	4277	21	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-6	4959	intron_retention	FALSE	non_canonical	0	0	junction_2	180.168421206381	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCACCAGACCCCT	NA	False	NA	NA	False	AATAAA	-22	NA	115980862	115946501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946819_115948405_115948544_115953284_115953421_115953516_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.30	chr4	-	6209	17	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	-6	intron_retention	FALSE	canonical	2	4	junction_4	165.528875407737	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGACTCCTCAGGGG	NA	False	NA	-18	True	AATAAA	-14	NA	115980867	115951466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956658_115956731_115956833_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.31	chr4	-	5637	18	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	-58	intron_retention	FALSE	canonical	2	4	junction_4	162.587086060466	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTGCATTCAGAG	NA	False	NA	-70	True	CATAAA	-2	NA	115980867	115951518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956658_115956731_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.34	chr4	-	5277	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	3	-385	intron_retention	FALSE	canonical	1	19	junction_18	118.034272591366	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGGCATGTGTTGTA	NA	False	NA	0	True	NA	NA	NA	115980879	115951845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.35	chr4	-	6051	16	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-6	-386	intron_retention	FALSE	canonical	3	379	junction_9	51.7478501968922	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGGGCATGTGTTGT	NA	False	NA	-1	True	NA	NA	NA	115980862	115951846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.36	chr4	-	5518	17	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-7	-389	intron_retention	FALSE	canonical	3	169	junction_16	92.6925150362746	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	-4	True	NA	NA	NA	115980863	115951849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.37	chr4	-	5088	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-62	-389	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	-4	True	NA	NA	NA	115980949	115951849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.38	chr4	-	5187	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	2	-389	intron_retention	FALSE	canonical	3	30	junction_18	115.743916993454	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	-4	True	NA	NA	NA	115980880	115951849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980697
ES.24031.39	chr4	-	5460	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-113	-2322	-82	-389	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTGTGGGCATGTGT	NA	False	NA	-4	True	NA	NA	NA	115980969	115951849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.4	chr4	-	3832	21	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	7	4956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.966299891167	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACTCTGCACCAGACC	NA	False	NA	NA	False	AATAAA	-19	NA	115980875	115946504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115948405_115948544_115953461_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.40	chr4	-	4965	18	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-1	-390	intron_retention	FALSE	canonical	2	3	junction_14	149.947787914147	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGTGTGGGCATGTG	NA	False	NA	-5	True	NA	NA	NA	115980888	115951850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.41	chr4	-	5078	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	-37	-2261	-32	-391	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980919	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.42	chr4	-	5194	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-391	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980867	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.43	chr4	-	5098	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-10	-391	intron_retention	FALSE	canonical	3	16	junction_18	140.349583327369	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980866	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980675
ES.24031.44	chr4	-	5209	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	13	-391	intron_retention	FALSE	canonical	1	4	junction_4	184.432328919355	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980869	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956658_115956731_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.45	chr4	-	5850	16	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	-391	intron_retention	FALSE	canonical	3	379	junction_9	51.8375239463546	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980867	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.46	chr4	-	5141	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-7	-391	intron_retention	FALSE	canonical	2	16	junction_18	118.660528347274	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTGTGGGCATGT	NA	False	NA	-6	True	NA	NA	NA	115980863	115951851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980724
ES.24031.47	chr4	-	5049	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-6	-414	intron_retention	FALSE	canonical	3	16	junction_18	150.497144762675	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAACAAACC	NA	False	NA	-29	True	NA	NA	NA	115980862	115951874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980697
ES.24031.48	chr4	-	5068	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-414	intron_retention	FALSE	canonical	0	0	junction_18	122.011636765404	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAACAAACC	NA	False	NA	-29	True	NA	NA	NA	115980867	115951874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980610
ES.24031.49	chr4	-	4321	14	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-10	-414	intron_retention	FALSE	canonical	3	12	junction_10	159.602464722704	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAACAAACC	NA	False	NA	-29	True	NA	NA	NA	115980866	115951874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.5	chr4	-	4057	21	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	4956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.246872342827	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACTCTGCACCAGACC	NA	False	NA	NA	False	AATAAA	-19	NA	115980867	115946504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115948405_115948544_115953461_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.50	chr4	-	4108	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	13	-1341	13	-1311	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATAGTCACTGATGCTT	NA	False	NA	NA	False	GATAAA	-25	NA	115980869	115952771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.51	chr4	-	4067	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-4	-1321	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCTCTCTATATATAGTC	NA	False	NA	NA	False	GATAAA	-15	NA	115980860	115952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.52	chr4	-	3728	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-11	-692	-11	633	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTGTCTACATTGAT	NA	False	NA	NA	False	NA	NA	NA	115980867	115953479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.54	chr4	-	2781	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	139.211625028982	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTAGGCATTCCT	NA	False	NA	6	True	NA	NA	NA	115980880	115954110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956217_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.58	chr4	-	3125	18	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-2	20	intron_retention	FALSE	canonical	1	19	junction_17	121.146741070374	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980858	115954151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.59	chr4	-	2777	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	20	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_18	150.497144762675	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980867	115954151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980697
ES.24031.6	chr4	-	4174	22	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-4	4955	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	195.022912776772	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGACTCTGCACCAGAC	NA	False	NA	NA	False	AATAAA	-18	NA	115980860	115946505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946819_115948405_115948544_115953284_115953421_115953516_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.60	chr4	-	2715	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-6	20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	137.315892456	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980862	115954151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956939_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.62	chr4	-	2791	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	122.011636765404	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCTGGGAACACATT	NA	False	NA	-35	True	NA	NA	NA	115980867	115954151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980610
ES.24031.63	chr4	-	2742	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	-2	40	-2	19	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGCCTGGGAACACAT	NA	False	NA	-36	True	NA	NA	NA	115980884	115954152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.64	chr4	-	2334	16	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-1	19	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	199.932388571737	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGCCTGGGAACACAT	NA	False	NA	-36	True	NA	NA	NA	115980180	115954152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956658_115956731_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115976034_115976155_115980092
ES.24031.65	chr4	-	2997	18	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-5	19	intron_retention	FALSE	canonical	2	4	junction_4	162.587086060466	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGCCTGGGAACACAT	NA	False	NA	-36	True	NA	NA	NA	115980861	115954152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956658_115956731_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.66	chr4	-	3887	16	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-5	18	intron_retention	FALSE	canonical	3	379	junction_9	50.4719944347578	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGGCCTGGGAACACA	NA	False	NA	-37	True	NA	NA	NA	115980861	115954153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956659_115956833_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.67	chr4	-	3217	17	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	17	intron_retention	FALSE	canonical	3	169	junction_16	92.6925150362746	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAGGCCTGGGAACAC	NA	False	NA	-38	True	NA	NA	NA	115980867	115954154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.69	chr4	-	2848	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	146.481417099766	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTGAGGCCTGGGAACA	NA	False	NA	-39	True	NA	NA	NA	115980867	115954155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967912_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.7	chr4	-	3598	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	61	4955	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.634959365774	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGACTCTGCACCAGAC	NA	False	NA	NA	False	AATAAA	-18	NA	115980118	115946505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946819_115948405_115948534_115953458_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969493_115969572_115969677_115969739_115976034_115976155_115980092
ES.24031.70	chr4	-	2770	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	1	-23	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_18	140.349583327369	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980881	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980675
ES.24031.71	chr4	-	3697	16	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-23	intron_retention	FALSE	canonical	3	169	junction_15	94.1409345372966	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.72	chr4	-	3426	16	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-7	-23	intron_retention	FALSE	canonical	3	105	junction_15	109.210784978204	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980863	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
ES.24031.73	chr4	-	2364	16	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	7	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	159.64368658568	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980875	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.75	chr4	-	2830	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	-23	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	115.743916993454	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980868	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980697
ES.24031.76	chr4	-	2708	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-12	-23	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_18	152.520304265683	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980868	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980724
ES.24031.77	chr4	-	2629	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-6	-23	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	121.172155869344	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980862	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980724
ES.24031.78	chr4	-	2002	14	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-23	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	159.602464722704	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.79	chr4	-	2641	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-23	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	138.839691286545	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967912_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.8	chr4	-	2636	12	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-5842	4954	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.76899482509	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGACTCTGCACCAGA	1124	False	NA	NA	False	AATAAA	-17	NA	115963097	115946506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115948405_115948533_115953461_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954
ES.24031.80	chr4	-	3404	17	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-11	-23	intron_retention	FALSE	canonical	2	15	junction_4	125.663846605736	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956731_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.81	chr4	-	2231	15	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-23	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	163.715859503779	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.82	chr4	-	2345	17	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-11	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	147.313388308735	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980867	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967672_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ES.24031.84	chr4	-	3189	17	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	-23	intron_retention	FALSE	canonical	3	379	junction_10	51.6263241355609	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980868	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.86	chr4	-	2845	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	-10	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	146.257088041808	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	-78	True	AAGAAA	-15	NA	115980866	115954194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956654_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
ES.24031.87	chr4	-	3323	17	NIC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-6	-27	intron_retention	FALSE	canonical	3	379	junction_10	50.2129449818471	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTTAAAAAAAAAAAAGAAA	NA	False	NA	-82	True	AAGAAA	-11	NA	115980862	115954198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.88	chr4	-	2878	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	1	-49	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_18	118.034272591366	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATAAGAAAAACTTTTT	NA	False	NA	-104	True	NA	NA	NA	115980855	115954220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.89	chr4	-	2988	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	-13	50	13	-50	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATAAGAAAAACTTTT	NA	False	NA	-105	True	NA	NA	NA	115980869	115954221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ES.24031.9	chr4	-	2961	14	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	2444	4954	intron_retention	FALSE	canonical	0	0	junction_1	186.017209867431	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGACTCTGCACCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	115967550	115946506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115946775_115948405_115948512_115953284_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514
ES.24031.91	chr4	-	2503	9	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	-12	1134	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_8	152.706417677844	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAGTTCATGTCAG	NA	False	NA	NA	False	NA	NA	NA	115980868	115966063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
ES.24031.92	chr4	-	1441	3	ISM	ENSMUSG00000028702.16	ENSMUST00000143089.2	1519	4	16	392	11	-392	intron_retention	FALSE	canonical	3	501	junction_1	8	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAATAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	115980871	115975413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_115976155_115980092_115980180_115980258
ES.24031.93	chr4	-	1146	5	NNC	ENSMUSG00000028702.16	novel	1519	4	NA	NA	1	-392	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	243.116227348155	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAATAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	115980855	115975413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980697
ES.24032.1	chr4	+	2873	22	NIC	ENSMUSG00000028700.15	novel	870	7	NA	NA	5	-18	intron_retention	TRUE	canonical	0	0	junction_1	92.9492827352516	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	115981041	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_115981314_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.10	chr4	+	2795	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-12	-18	intron_retention	FALSE	canonical	3	321	junction_9	37.3583658636188	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007702	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.11	chr4	+	4424	21	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	-18	intron_retention	FALSE	non_canonical	0	0	junction_17	95.6200162099965	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007703	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015307_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.12	chr4	+	5236	17	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	321	junction_8	36.6984651416105	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007703	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116016290_116016376
ES.24032.13	chr4	+	4401	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	0	intron_retention	FALSE	canonical	3	321	junction_9	37.6848444338039	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007703	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.14	chr4	+	3474	19	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	321	junction_7	37.545856735793	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007703	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.15	chr4	+	2703	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-11	-18	intron_retention	FALSE	canonical	0	0	junction_13	93.7169715062289	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007703	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012665_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.16	chr4	+	4732	19	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-10	-18	intron_retention	FALSE	canonical	3	321	junction_9	39.5007813643612	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007704	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.17	chr4	+	2875	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-10	-18	intron_retention	FALSE	canonical	0	0	junction_19	124.736475052876	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007704	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116015898_116015981_116016179_116016290_116016376
ES.24032.18	chr4	+	2720	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_18	93.4893011692064	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGTGTATTTTGTAATAG	NA	False	NA	7	True	ATTAAA	-17	NA	116007706	116017042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015147_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.19	chr4	+	4507	19	NNC	ENSMUSG00000028700.15	novel	2613	21	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	134.314721622183	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007706	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008303_116008363_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.2	chr4	+	175	1	Intergenic	novelGene_19704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGATGACC	NA	False	NA	NA	False	NA	NA	NA	115983411	115983586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_115983400_115983600
ES.24032.20	chr4	+	3493	19	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	321	junction_9	37.7127299462662	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007707	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012344_116012425_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116016290_116016376
ES.24032.21	chr4	+	4591	20	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-7	0	intron_retention	FALSE	canonical	3	321	junction_9	38.5613875452931	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007707	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.22	chr4	+	2709	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-6	-18	intron_retention	FALSE	canonical	0	0	junction_7	93.703469178331	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007708	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010868_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.23	chr4	+	3232	20	ISM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	-2	0	-2	0	intron_retention	FALSE	canonical	3	321	junction_9	34.5942047570122	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007712	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619
ES.24032.24	chr4	+	3149	21	ISM	ENSMUSG00000028700.15	ENSMUST00000121052.8	2693	22	12762	18	-1	-18	3prime_fragment	FALSE	canonical	3	321	junction_8	36.8109698323747	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007713	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.25	chr4	+	4457	20	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-1	-18	intron_retention	FALSE	non_canonical	0	0	junction_8	98.2270533845971	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007713	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011286_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.26	chr4	+	6406	15	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	321	junction_5	35.4087646246646	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007713	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116009393_116009905_116009972_116010059_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179
ES.24032.27	chr4	+	2921	19	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	0	-4	intron_retention	FALSE	canonical	2	3	junction_15	100.152553390402	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGGGGTGTATTTTGT	NA	False	NA	2	True	ATTAAA	-12	NA	116007714	116017037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.28	chr4	+	4455	20	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-2	-18	intron_retention	FALSE	canonical	3	321	junction_8	38.2152382189744	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007719	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.29	chr4	+	4401	21	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-2	-18	intron_retention	FALSE	canonical	1	1	junction_17	95.4196520639223	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007719	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015314_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.3	chr4	+	4559	20	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-31	-4	intron_retention	FALSE	canonical	3	321	junction_8	35.8088183014191	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGGGGTGTATTTTGT	NA	False	NA	2	True	ATTAAA	-12	NA	116007683	116017037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.30	chr4	+	4657	19	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	321	junction_9	39.2769919770523	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007723	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.31	chr4	+	4398	18	NNC	ENSMUSG00000028700.15	novel	2226	21	NA	NA	8	-2	intron_retention	FALSE	canonical	2	22	junction_13	95.8878020826179	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007729	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116014640_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.32	chr4	+	3227	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	13	-18	intron_retention	FALSE	canonical	1	9	junction_13	120.093179998225	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007734	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012559_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116014640_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.34	chr4	+	4180	17	NIC	ENSMUSG00000028700.15	novel	2226	21	NA	NA	471	-18	intron_retention	FALSE	canonical	3	321	junction_6	40.0050289807419	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116009098	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116009132_116009273_116009393_116009905_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.4	chr4	+	2833	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	-30	-84	-30	79	multi-exon	FALSE	canonical	3	321	junction_9	36.7984644262092	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTTGGTTTTTTGT	NA	False	NA	90	True	GATAAA	-13	NA	116007684	116017125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.5	chr4	+	2993	20	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-21	-18	intron_retention	FALSE	canonical	3	321	junction_9	37.8198822090274	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007693	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.6	chr4	+	2639	21	FSM	ENSMUSG00000028700.15	ENSMUST00000106496.8	2613	21	-27	1	-20	-1	multi-exon	FALSE	canonical	0	0	junction_7	95.8541991777095	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGTGTATTTTGTAAT	NA	False	NA	5	True	ATTAAA	-15	NA	116007694	116017040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.7	chr4	+	3715	18	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-20	0	intron_retention	FALSE	canonical	3	321	junction_6	33.392600137525	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007694	116017041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009393_116009905_116009972_116010059_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179
ES.24032.8	chr4	+	2653	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-17	-18	intron_retention	FALSE	canonical	2	3	junction_17	95.0191559634161	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAAAACCTCTG	NA	False	NA	-12	True	GATAAA	-15	NA	116007697	116017023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24032.9	chr4	+	2830	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	9	junction_13	91.9534783293745	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGGTGTATTTTGTAA	NA	False	NA	4	True	ATTAAA	-14	NA	116007698	116017039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012559_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ES.24033.1	chr4	-	6107	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	15	-380	15	380	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCAGGGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116001791	115989222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115995032_116001493
ES.24033.2	chr4	-	5696	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	50	-4	50	4	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAAGTGTCTTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	116001756	115989598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115995032_116001493
ES.24033.3	chr4	-	3859	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	13	1870	13	-1870	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGAGTTGTAATTGTCT	NA	False	NA	NA	False	NA	NA	NA	116001793	115991472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_115995032_116001493
ES.24034.1	chr4	-	1254	8	FSM	ENSMUSG00000028699.10	ENSMUST00000030465.10	1985	8	-7	738	-6	701	multi-exon	FALSE	canonical	0	0	junction_3	1.48461497791618	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACCTGTATATGCTTG	NA	False	NA	NA	False	TATAAA	-18	NA	116024804	116019803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116024204_116024270_116024662
ES.24034.2	chr4	-	1144	8	NNC	ENSMUSG00000028699.10	novel	1985	8	NA	NA	-38	698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.64130361329658	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTGACCTGTATATGC	NA	False	NA	NA	False	TATAAA	-15	NA	116024836	116019806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116024204_116024270_116024801
ES.24034.3	chr4	-	1114	7	NNC	ENSMUSG00000028699.10	novel	1985	8	NA	NA	-23	690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.10554159678513	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCTAATTGACCT	NA	False	NA	NA	False	TATAAA	-7	NA	116022053	116019814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116021975
ES.24035.1	chr4	-	180	1	Intergenic	novelGene_19705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAGTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	116026996	116026816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116026800_116027000
ES.24036.1	chr4	-	179	1	Intergenic	novelGene_19706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAAGGCCGG	5537	False	NA	NA	False	NA	NA	NA	116050805	116050626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116050600_116050800
ES.24037.1	chr4	+	127	1	Intergenic	novelGene_19707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	116052875	116053002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116052900_116053000
ES.24038.1	chr4	+	177	1	Intergenic	novelGene_19708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	116053026	116053203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116053000_116053200
ES.24039.1	chr4	+	5343	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	-84	-2	-41	2	multi-exon	FALSE	canonical	2	5	junction_9	3.32591767713239	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGGTTTTCTTGGCA	3207	False	NA	NA	False	AATAAA	-17	NA	116078773	116160255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ES.24039.2	chr4	+	5076	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	-64	245	-21	-245	multi-exon	FALSE	canonical	2	5	junction_9	3.32591767713239	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGACTCAGAAGGAAGC	3227	False	NA	NA	False	AATAAA	-27	NA	116078793	116160008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ES.24039.4	chr4	+	2771	11	NIC	ENSMUSG00000028698.14	novel	5257	10	NA	NA	-9	907	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.61410879802373	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTTTTAGATGGCTTG	3239	False	NA	NA	False	AGTAAA	-15	NA	116078805	116157945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116079271_116079500_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ES.24039.5	chr4	+	4843	11	NNC	ENSMUSG00000028698.14	novel	5257	10	NA	NA	-21	-259	intron_retention	FALSE	non_canonical	0	0	junction_1	4.61410879802373	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTATGTAAAAATAACTG	3270	False	NA	NA	False	AATAAA	-13	NA	116078836	116159994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116079075_116079250_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ES.24039.7	chr4	+	176	1	Intergenic	novelGene_19713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	8286	False	NA	NA	False	NA	NA	NA	116132117	116132293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116132100_116132300
ES.24039.8	chr4	+	222	1	Intergenic	novelGene_19714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTTCTAAAATT	4814	False	NA	NA	False	NA	NA	NA	116156277	116156499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116156300_116156500
ES.2404.1	chr10	+	1996	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	-41	-3	-41	3	multi-exon	FALSE	canonical	3	42	junction_2	1	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCTTTGTAGTTTT	NA	False	NA	15	True	AATAAA	-17	NA	18720726	18732824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_18721155_18729284_18729426_18731397
ES.24040.1	chr4	+	7367	10	Antisense	novelGene_ENSMUSG00000003810.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116169124	116187093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116169245_116169484_116171025_116172004_116172141_116173016_116173228_116173658_116173748_116174176_116174236_116174905_116175041_116176958_116179670_116183267_116183346_116184805
ES.24040.2	chr4	+	3832	13	Antisense	novelGene_ENSMUSG00000003810.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	116169124	116187093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116169245_116169484_116169590_116170049_116170220_116170892_116171025_116172004_116172142_116173016_116173228_116173658_116173745_116174172_116174236_116174905_116175041_116176958_116177057_116179459_116179669_116183267_116183346_116184805
ES.24041.1	chr4	+	160	1	Intergenic	novelGene_19716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	116266510	116266670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116266500_116266700
ES.24042.1	chr4	-	2423	11	NNC	ENSMUSG00000003810.14	novel	1195	9	NA	NA	-53	111557	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.329193624219	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTTGAGTTTGTTC	8434	False	NA	NA	False	NA	NA	NA	116321433	116052401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116052414_116178558_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248829_116287602_116287746_116292640_116292789_116320932
ES.24042.100	chr4	-	4616	6	NNC	ENSMUSG00000003810.14	novel	5188	26	NA	NA	-15	-7187	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	118.359790469568	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAGACTTTTGACAT	8472	False	NA	NA	False	AATAAA	-18	NA	116321395	116197616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116201355_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.101	chr4	-	947	5	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-36	46162	-36	-19692	5prime_fragment	FALSE	canonical	3	250	junction_2	32.6525267016199	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTCTTTCCTCTTT	8451	False	NA	NA	False	AATAAA	-15	NA	116321416	116210121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.102	chr4	-	186	1	Intergenic	novelGene_19715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	116265696	116265510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116265500_116265700
ES.24042.103	chr4	-	1015	4	NNC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-44	-89546	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	148.041285532861	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGACAGGGTTTCTCTG	8443	False	NA	NA	False	NA	NA	NA	116321424	116279975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116280208_116287602_116287746_116292640_116292789_116320932
ES.24042.104	chr4	-	5438	2	NNC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-36	-116128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGATTCTGTCCCCTCT	8451	False	NA	NA	False	ATTAAA	-34	NA	116321416	116306557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116311512_116320932
ES.24042.11	chr4	-	5645	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-60	2	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_6	58.4113994151198	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCTGTGTTTGCTTCTT	8427	False	NA	0	True	AATACA	-18	NA	116321440	116163956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116168067_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.12	chr4	-	5459	28	NIC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	71	1	intron_retention	FALSE	canonical	3	234	junction_1	28.8634265756855	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTGTTTGCTTCT	8819	False	NA	-1	True	AATACA	-17	NA	116321048	116163957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.13	chr4	-	5838	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-131	-2	-131	1	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTGTTTGCTTCT	8356	False	NA	-1	True	AATACA	-17	NA	116321511	116163957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.14	chr4	-	5556	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	78.4436217019222	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTGTTTGCTTCT	8447	False	NA	-1	True	AATACA	-17	NA	116321420	116163957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172089_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179565_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.17	chr4	-	5830	29	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.7737104145454	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8472	False	NA	-2	True	AATACA	-16	NA	116321395	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173550_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.2	chr4	-	173	1	Intergenic	novelGene_19709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAAAAGAAAAGAATAT	2579	False	NA	NA	False	NA	NA	NA	116072490	116072317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116072300_116072500
ES.24042.21	chr4	-	6181	28	NIC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-44	0	intron_retention	FALSE	canonical	3	226	junction_2	30.9867000984357	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8443	False	NA	-2	True	AATACA	-16	NA	116321424	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.22	chr4	-	6134	28	NIC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	29	0	intron_retention	FALSE	canonical	3	89	junction_1	47.3035320315638	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8516	False	NA	-2	True	AATACA	-16	NA	116321351	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.23	chr4	-	5597	28	NNC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-45	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	84.8480122641962	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8442	False	NA	-2	True	AATACA	-16	NA	116321425	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248829_116287602_116287741_116320927
ES.24042.24	chr4	-	5367	29	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.9940581593945	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8697	False	NA	-2	True	AATACA	-16	NA	116321170	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166753_116166824_116167088_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.26	chr4	-	5641	29	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_19	59.644482441499	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8447	False	NA	-2	True	AATACA	-16	NA	116321420	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179565_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.27	chr4	-	5638	28	NIC	ENSMUSG00000003810.14	novel	5292	30	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	70.7881555273406	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8460	False	NA	-2	True	AATACA	-16	NA	116321407	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.28	chr4	-	5755	29	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.1204148830851	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8447	False	NA	-2	True	AATACA	-16	NA	116321420	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166112_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.3	chr4	-	172	1	Intergenic	novelGene_19710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAGACACTGA	NA	False	NA	NA	False	NA	NA	NA	116086581	116086409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116086400_116086600
ES.24042.31	chr4	-	5651	30	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_29	59.7612371833026	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8447	False	NA	-2	True	AATACA	-16	NA	116321420	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932_116321165_116321259
ES.24042.33	chr4	-	5661	29	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.6098261044211	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8460	False	NA	-2	True	AATACA	-16	NA	116321407	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166828_116167088_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.34	chr4	-	5937	30	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	110.542355530496	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8452	False	NA	-2	True	AATACA	-16	NA	116321415	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116201202_116201355_116210169_116210262_116245045_116245152_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.35	chr4	-	7569	24	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-2623	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	65.1283740313679	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	NA	False	NA	-2	True	AATACA	-16	NA	116190516	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187687_116187734
ES.24042.36	chr4	-	5430	27	NIC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	61.5365384314894	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8472	False	NA	-2	True	AATACA	-16	NA	116321395	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116320932
ES.24042.37	chr4	-	5837	28	NIC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-35	0	intron_retention	FALSE	canonical	3	226	junction_2	30.8397335143693	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8452	False	NA	-2	True	AATACA	-16	NA	116321415	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.38	chr4	-	5797	30	FSM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-73	-1	-73	0	multi-exon	FALSE	canonical	1	2	junction_24	83.2550770091545	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8414	False	NA	-2	True	AATACA	-16	NA	116321453	116163958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.4	chr4	-	208	1	Intergenic	novelGene_19711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATTTTAATATATATA	NA	False	NA	NA	False	TTTAAA	-11	NA	116094150	116093942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116093900_116094200
ES.24042.45	chr4	-	5767	30	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	77.8641916573303	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8474	False	NA	-3	True	AATACA	-15	NA	116321393	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116225932_116225982_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.46	chr4	-	5517	28	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	61.7205970383099	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8448	False	NA	-3	True	AATACA	-15	NA	116321419	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.47	chr4	-	5715	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.1204148830851	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8458	False	NA	-3	True	AATACA	-15	NA	116321409	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166140_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.48	chr4	-	6096	28	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_4	61.668257125525	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8451	False	NA	-3	True	AATACA	-15	NA	116321416	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167088_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.49	chr4	-	8140	28	NIC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-35	0	intron_retention	FALSE	canonical	3	89	junction_1	47.2452086392789	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8452	False	NA	-3	True	AATACA	-15	NA	116321415	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.5	chr4	-	171	1	Intergenic	novelGene_19712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116094916	116094745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116094700_116094900
ES.24042.50	chr4	-	5769	30	NNC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	84.1285466784651	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8456	False	NA	-3	True	AATACA	-15	NA	116321411	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116178135_116178172_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.53	chr4	-	5697	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	60.7985549640309	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8487	False	NA	-3	True	AATACA	-15	NA	116321380	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287738_116292640_116292789_116320932
ES.24042.55	chr4	-	8557	27	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-18	0	intron_retention	FALSE	canonical	3	226	junction_2	31.2556977054305	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8469	False	NA	-3	True	AATACA	-15	NA	116321398	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.59	chr4	-	5563	30	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.1812408054239	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8442	False	NA	-3	True	AATACA	-15	NA	116321425	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167091_116167154_116167240_116167653_116167849_116168067_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.6	chr4	-	6336	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-49	-582	-49	581	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTACATTTTATCAACAA	8438	False	NA	NA	False	AATAAA	-15	NA	116321429	116163377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.63	chr4	-	5674	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	77.672413549024	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8452	False	NA	-3	True	AATACA	-15	NA	116321415	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168938_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248829_116287602_116287746_116292640_116292789_116320932
ES.24042.66	chr4	-	5751	29	NNC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	68.1802364535145	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8403	False	NA	-3	True	AATACA	-15	NA	116321464	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292754_116320932
ES.24042.68	chr4	-	5432	30	NNC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-39	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	83.7860930798129	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8448	False	NA	-3	True	AATACA	-15	NA	116321419	116163959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166819_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932_116321035_116321338
ES.24042.69	chr4	-	5539	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.0985771643891	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGGCCTGTGTTTGCT	8528	False	NA	-4	True	AATACA	-14	NA	116321339	116163960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166140_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179565_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.7	chr4	-	6251	29	NIC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-103	445	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	46.5144672469255	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCTCTGAACTTTAA	8384	False	NA	NA	False	NA	NA	NA	116321483	116163513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.70	chr4	-	5661	28	NIC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-36	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	70.5509184827911	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGGCCTGTGTTTGCT	8451	False	NA	-4	True	AATACA	-14	NA	116321416	116163960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.75	chr4	-	5552	28	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	61.4882191756575	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8472	False	NA	-5	True	AATACA	-13	NA	116321395	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.76	chr4	-	5650	29	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	60.0166218472781	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8452	False	NA	-5	True	AATACA	-13	NA	116321415	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167152_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.78	chr4	-	5915	30	NNC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	96.3534910823548	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8472	False	NA	-5	True	AATACA	-13	NA	116321395	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173550_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116177792_116177884_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.79	chr4	-	5767	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-103	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	60.7985549640309	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8384	False	NA	-5	True	AATACA	-13	NA	116321483	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292679_116292789_116320932
ES.24042.80	chr4	-	6023	28	NNC	ENSMUSG00000003810.14	novel	5723	30	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	15	junction_6	68.6578163620097	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8472	False	NA	-5	True	AATACA	-13	NA	116321395	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116168067_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.82	chr4	-	6051	28	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-39	-2	intron_retention	FALSE	canonical	3	226	junction_1	29.428204233177	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8448	False	NA	-5	True	AATACA	-13	NA	116321419	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.83	chr4	-	5737	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	58.1761487700439	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8437	False	NA	-5	True	AATACA	-13	NA	116321430	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184821_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.84	chr4	-	5697	28	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	79.7661878165985	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGGCCTGTGTTTGC	8437	False	NA	-5	True	AATACA	-13	NA	116321430	116163961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173653_116173746_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.87	chr4	-	7315	23	NNC	ENSMUSG00000003810.14	novel	5445	29	NA	NA	-1944	-5	intron_retention	FALSE	non_canonical	0	0	junction_22	66.5046447144486	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	NA	False	NA	-8	True	AATACA	-10	NA	116189837	116163964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187687_116187734
ES.24042.88	chr4	-	5756	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-50	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	60.7692503303627	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	8437	False	NA	-8	True	AATACA	-10	NA	116321430	116163964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179454_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.90	chr4	-	5729	29	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-53	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	92.3234318655268	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCATCTTGGCCTGTGT	8434	False	NA	-9	True	AATACA	-9	NA	116321433	116163965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116165535_116165843_116166038_116166140_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248829_116287602_116287738_116292633_116292789_116320932
ES.24042.91	chr4	-	5553	30	NNC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	-39	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7612371833026	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAAACCATCTTGGCCT	8448	False	NA	-13	True	AATACA	-5	NA	116321419	116163969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116164094_116164274_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.92	chr4	-	2681	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-22	14301	-22	-1215	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTCTCTGAAAAACAAAA	8465	False	NA	NA	False	NA	NA	NA	116321402	116178260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.93	chr4	-	2494	10	ISM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	-129	14595	-129	1076	5prime_fragment	FALSE	canonical	3	250	junction_7	35.0442401177725	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTGGGAGGAACTGAAA	8358	False	NA	NA	False	NA	NA	NA	116321509	116178554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.96	chr4	-	2414	11	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-36	14603	-36	1068	5prime_fragment	FALSE	canonical	1	2	junction_5	122.301635312043	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTCTCTGGGAGG	8451	False	NA	NA	False	NA	NA	NA	116321416	116178562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24042.97	chr4	-	4456	6	ISM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	-57	27199	-57	-729	5prime_fragment	FALSE	canonical	3	250	junction_3	29.9639783740411	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAAACAGGCTTCCCA	8430	False	NA	NA	False	NA	NA	NA	116321437	116191158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ES.24043.1	chr4	+	182	1	Intergenic	novelGene_19717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGAATGGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	116323642	116323824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116323600_116323800
ES.24044.1	chr4	+	4674	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	50	-2606	47	2598	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTTCTAAATACTTTG	NA	False	NA	41	True	ATTAAA	-33	NA	116364795	116398038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.10	chr4	+	1283	5	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	73	13726	70	-13726	5prime_fragment	FALSE	canonical	3	66	junction_1	9.20258115965298	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAACCATCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	116364818	116381706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382
ES.24044.101	chr4	+	921	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	5	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9229.99602600131	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542800	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556371
ES.24044.104	chr4	+	3338	1	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	5	1044	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2624	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAAAACAAATCTATCAAT	NA	False	NA	NA	False	NA	NA	NA	116542800	116546138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116542800_116546100
ES.24044.105	chr4	+	1576	2	FSM	ENSMUSG00000028691.13	ENSMUST00000156145.7	553	2	6	-1029	6	1029	multi-exon	FALSE	canonical	3	23986	junction_1	0	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	116542801	116546123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603
ES.24044.106	chr4	+	1810	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	61	423	6	-423	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAAGTTAACTATTACG	NA	False	NA	14	True	AATAAA	-24	NA	116542801	116557596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.107	chr4	+	988	6	NNC	ENSMUSG00000028691.13	novel	877	6	NA	NA	-71	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9266.17147693696	2697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542986	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116543107_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.108	chr4	+	1058	6	FSM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	61	-242	61	242	multi-exon	FALSE	canonical	0	0	junction_1	9266.17147693696	2697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116543144	116556711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116543334_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.109	chr4	+	4926	1	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	7772	737	mono-exon	FALSE	NA	NA	NA	NA	NA	2691	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTAGCTTTTTTTTTTT	NA	False	NA	18	True	NA	NA	NA	116552280	116557206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116552300_116557200
ES.24044.11	chr4	+	2394	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	72	3165	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	25.5255862921022	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTCTTGAGGG	NA	False	NA	NA	False	AATAAA	-10	NA	116364820	116398605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395259_116398080
ES.24044.110	chr4	+	177	1	Intergenic	novelGene_19733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTAGCCGGG	1234	False	NA	NA	False	NA	NA	NA	116561383	116561560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116561400_116561600
ES.24044.111	chr4	+	160	1	Intergenic	novelGene_19734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAAACAAA	2298	False	NA	NA	False	NA	NA	NA	116562447	116562607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116562400_116562600
ES.24044.112	chr4	+	607	1	Antisense	novelGene_ENSMUSG00000028690.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2622	False	NA	NA	False	NA	NA	NA	116562771	116563378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116562800_116563400
ES.24044.113	chr4	+	1737	10	NIC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	-78	0	intron_retention	FALSE	canonical	3	19	junction_2	21.1980665319118	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5478	False	NA	15	True	AATAAA	-19	NA	116565627	116572300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568482_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ES.24044.114	chr4	+	2817	10	NNC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	-45	2	intron_retention	TRUE	non_canonical	0	0	junction_8	26.1991423853605	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTCTCTGTAAATC	5511	False	NA	13	True	AATAAA	-17	NA	116565660	116572298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570417_116570618_116570835_116570898_116571347_116572036
ES.24044.115	chr4	+	2725	10	NNC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_8	28.1810723626013	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5616	False	NA	11	True	AATAAA	-15	NA	116565765	116572296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566292_116566436_116566817_116566920_116567003_116567297_116567478_116568507_116568576_116569568_116569637_116569919_116570417_116570618_116570835_116570898_116571347_116572036
ES.24044.116	chr4	+	1548	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	-335	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5642	False	NA	15	True	AATAAA	-19	NA	116565791	116572300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ES.24044.117	chr4	+	1340	11	NNC	ENSMUSG00000028689.15	novel	1159	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.4629930280004	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5642	False	NA	11	True	AATAAA	-15	NA	116565791	116572296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116565854_116566129_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571212_116571347_116572036
ES.24044.118	chr4	+	1374	7	NIC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	7	junction_5	28.2945813422523	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGATGTGTTCTCTGTA	5642	False	NA	9	True	AATAAA	-13	NA	116565791	116572294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116571212_116571347_116572036
ES.24044.119	chr4	+	1624	10	NIC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_8	24.8953364664505	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5663	False	NA	15	True	AATAAA	-19	NA	116565812	116572300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568482_116568576_116569568_116569637_116569919_116570024_116571212_116571347_116572036
ES.24044.12	chr4	+	4288	8	NIC	ENSMUSG00000028696.13	novel	2115	9	NA	NA	72	2579	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.1069386451104	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTGGAAATGTCAG	NA	False	NA	22	True	ATTAAA	-14	NA	116364820	116398019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116364848_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.120	chr4	+	3056	8	NNC	ENSMUSG00000028689.15	novel	1237	10	NA	NA	-11	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	28.9136645896019	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGATGTGTTCTCTGTA	5740	False	NA	9	True	AATAAA	-13	NA	116565889	116572294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566817_116566920_116567003_116567297_116567482_116568482_116568576_116569568_116570417_116570618_116570835_116570898_116571347_116572036
ES.24044.121	chr4	+	2441	11	NNC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.4204641971778	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5740	False	NA	11	True	AATAAA	-15	NA	116565889	116572296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570417_116570618_116570835_116570898_116571347_116572036
ES.24044.122	chr4	+	2459	11	NNC	ENSMUSG00000028689.15	novel	1237	10	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	27.5189025943986	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	5752	False	NA	11	True	AATAAA	-15	NA	116565901	116572296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568482_116568576_116569568_116569637_116569919_116570417_116570613_116570835_116570898_116571347_116572036
ES.24044.123	chr4	+	1092	5	NIC	ENSMUSG00000028689.15	novel	1237	10	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	35.27304211434	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTGTTCTCTGTAAAT	5759	False	NA	12	True	AATAAA	-16	NA	116565908	116572297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116566292_116566634_116566817_116566920_116567003_116567297_116567482_116572036
ES.24044.124	chr4	+	3636	7	NNC	ENSMUSG00000028689.15	novel	1213	10	NA	NA	163	0	intron_retention	TRUE	non_canonical	0	0	junction_4	32.9275298530306	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	6140	False	NA	15	True	AATAAA	-19	NA	116566289	116572300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116566817_116566920_116567003_116567297_116567482_116568507_116570417_116570612_116570835_116570898_116571347_116572036
ES.24044.125	chr4	+	165	1	Genic_Genomic	ENSMUSG00000028689.15	novel	NA	NA	NA	NA	1410	2	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTCCTCTACTCCTT	7387	False	NA	NA	False	NA	NA	NA	116567536	116567701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_116567500_116567700
ES.24044.126	chr4	+	1163	1	NIC	ENSMUSG00000028689.15	novel	1524	9	NA	NA	1147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTTCTCTGTAAA	NA	False	NA	11	True	AATAAA	-15	NA	116571133	116572296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116571100_116572300
ES.24044.13	chr4	+	2045	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	80	-7	77	-1	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAACAGTACAAATGGTAT	NA	False	NA	NA	False	AATAAA	-26	NA	116364825	116395439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.14	chr4	+	2136	9	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	80	259	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.978055643177	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTGTTTGCTAGAA	NA	False	NA	NA	False	NA	NA	NA	116364828	116395699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116367895_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.15	chr4	+	1591	6	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	88	-8376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9434824377229	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATTGTAGACATGTTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	116364836	116387056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116365141_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867
ES.24044.16	chr4	+	4422	9	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	2969	79400	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	27.3698625316241	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGGAAATCAGAAACC	NA	False	NA	NA	False	NA	NA	NA	116367717	116474840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116397687_116474689
ES.24044.17	chr4	+	4608	8	ISM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	2969	-2583	2969	2583	3prime_fragment	FALSE	canonical	3	65	junction_6	9.03507902905251	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAATGTCAGTATG	NA	False	NA	26	True	ATTAAA	-18	NA	116367717	116398023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.18	chr4	+	250	1	Intergenic	novelGene_19718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATAAAAATAATATTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	116377077	116377327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116377100_116377300
ES.24044.19	chr4	+	157	2	Antisense	novelGene_ENSMUSG00000028693.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	838	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAATTAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	116377078	116487255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116377097_116487116
ES.24044.2	chr4	+	5512	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	59	-3453	56	3445	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGCTGTAACAGATTT	NA	False	NA	NA	False	NA	NA	NA	116364804	116398885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.20	chr4	+	1328	7	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	13231	3165	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	25.610870088044	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTCTTGAGGG	NA	False	NA	NA	False	AATAAA	-10	NA	116377979	116398605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
ES.24044.21	chr4	+	216	1	Intergenic	novelGene_19719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGGAAATATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	116379132	116379348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116379100_116379300
ES.24044.22	chr4	+	177	1	Antisense	novelGene_ENSMUSG00000055900.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116409950	116410127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116410000_116410100
ES.24044.23	chr4	+	3620	12	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-563	18	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	92.2834297420652	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTAGTGCCCAGGAT	NA	False	NA	30	True	AATAAA	-36	NA	116414291	116451097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116414477_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.24	chr4	+	3445	12	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-534	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5682439736043	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTGGATTCTTTTTTT	NA	False	NA	11	True	AATATA	-15	NA	116414320	116450941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116414487_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.25	chr4	+	3433	12	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-533	-139	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	92.2834297420652	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGAGTGGATTCTTTTTT	NA	False	NA	10	True	AATATA	-14	NA	116414321	116450940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116414477_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.26	chr4	+	3581	12	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-518	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.275181597982	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGGAATTTTTTAGTG	NA	False	NA	22	True	AATAAA	-28	NA	116414336	116451089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116414487_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436521_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.27	chr4	+	300	2	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	-505	-12106	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCATTTTGGAATTCT	NA	False	NA	NA	False	AATACA	-18	NA	116414349	116426533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116414477_116426360
ES.24044.29	chr4	+	3717	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	-264	135	-264	-135	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGATTCTTTTTTTAAG	NA	False	NA	14	True	AATATA	-18	NA	116414590	116450944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.3	chr4	+	4480	9	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	60	2583	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.978055643177	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAATGTCAGTATG	NA	False	NA	26	True	ATTAAA	-18	NA	116364808	116398023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116367895_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.30	chr4	+	3933	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	-247	-98	-247	98	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTTTGCCTATGTGTG	NA	False	NA	110	True	NA	NA	NA	116414607	116451177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.33	chr4	+	3371	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	89.5750383756546	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTTTTACTGAAGGA	NA	False	NA	11	True	AATAAA	-17	NA	116414873	116451078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427077_116427273_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.34	chr4	+	2190	6	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	19	-174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	120.773507028653	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTCTTGTGTAAGAAATA	NA	False	NA	15	True	AATAAA	-19	NA	116414873	116450905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431756_116450350
ES.24044.36	chr4	+	4491	11	NIC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	37	2	combination_of_known_junctions	FALSE	canonical	3	268	junction_2	28.3591255154315	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTACTGAAGGAATT	NA	False	NA	14	True	AATAAA	-20	NA	116414891	116451081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116448529_116450002
ES.24044.37	chr4	+	3353	12	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	41	-178	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	95.7461347211969	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	NA	False	NA	11	True	AATAAA	-15	NA	116414895	116450901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436459_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.38	chr4	+	3446	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	47	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.326779813856	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTAGAGAGTGGATTC	NA	False	NA	4	True	AATATA	-8	NA	116414901	116450934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116424440_116424491_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.39	chr4	+	3427	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	50	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	122.066466411633	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGATTGTCTTGTGTAA	NA	False	NA	9	True	AATAAA	-13	NA	116414904	116450899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116435389_116435459_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.4	chr4	+	1327	6	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	65	8373	62	-8373	5prime_fragment	FALSE	canonical	3	66	junction_1	8.66256313108309	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTAGACATGTTCATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	116364810	116387059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867
ES.24044.40	chr4	+	2509	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	53	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.9456361117807	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTCTTGTGTAAG	NA	False	NA	10	True	AATAAA	-14	NA	116414907	116450900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116426427_116427273_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.41	chr4	+	3532	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	53	3	53	-3	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTTTTTTTACTGAAG	NA	False	NA	9	True	AATAAA	-15	NA	116414907	116451076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.42	chr4	+	3200	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	53	-138	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	89.5750383756546	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTGGATTCTTTTTTT	NA	False	NA	11	True	AATATA	-15	NA	116414907	116450941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427077_116427273_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.43	chr4	+	2765	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	91.6819305473488	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTTTTTTTACTGAAG	NA	False	NA	9	True	AATAAA	-15	NA	116414907	116451076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116426507_116427273_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.44	chr4	+	6121	5	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	54	14803	54	-2363	5prime_fragment	FALSE	canonical	3	268	junction_2	24.9136007032304	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTGCCTGTTATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	116414908	116436276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533
ES.24044.46	chr4	+	2342	6	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	55	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	120.773507028653	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATTTTTTAGTGCCCA	NA	False	NA	26	True	AATAAA	-32	NA	116414909	116451093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431756_116450350
ES.24044.47	chr4	+	3406	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	55	25811	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.9456361117807	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATATGGAAAAAATAAACAG	NA	False	NA	NA	False	ATTAAA	-8	NA	116414909	116476890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002_116450935_116476872
ES.24044.48	chr4	+	3724	12	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	93.2404693465608	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTTTTACTGAAGGA	NA	False	NA	11	True	AATAAA	-17	NA	116414909	116451078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448233_116448529_116450002
ES.24044.5	chr4	+	4506	8	NIC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	62	2583	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	28.8295483340072	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAATGTCAGTATG	NA	False	NA	26	True	ATTAAA	-18	NA	116364810	116398023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116387609_116387733_116389754_116389976_116394996
ES.24044.50	chr4	+	2037	5	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	60	18881	60	-6441	5prime_fragment	FALSE	canonical	3	268	junction_2	24.9136007032304	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGAGTTGGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116414914	116432198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533
ES.24044.51	chr4	+	3073	11	NIC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	61	-176	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	100.166062116867	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGTCTTGTGTAAGAAA	NA	False	NA	13	True	AATAAA	-17	NA	116414915	116450903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.52	chr4	+	2459	13	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	73	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.9456361117807	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATTGTCTTGTGTAAG	NA	False	NA	10	True	AATAAA	-14	NA	116414927	116450900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415026_116426360_116426397_116427273_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.53	chr4	+	7933	11	NIC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	109	-178	intron_retention	FALSE	canonical	3	268	junction_2	29.2615789047686	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	NA	False	NA	11	True	AATAAA	-15	NA	116414963	116450901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.54	chr4	+	3688	12	NNC	ENSMUSG00000034042.17	novel	2642	12	NA	NA	-50	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.2940642311259	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGGAATTTTTTAGTG	NA	False	NA	22	True	AATAAA	-28	NA	116415225	116451089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415487_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.55	chr4	+	3457	12	NNC	ENSMUSG00000034042.17	novel	2642	12	NA	NA	-5	-176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.2940642311259	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGTCTTGTGTAAGAAA	NA	False	NA	13	True	AATAAA	-17	NA	116415270	116450903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116415487_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.56	chr4	+	3378	12	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	-9568	124550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	125.363801173338	3543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTGAGAGAGAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	116426427	116575629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445777_116445941_116447362_116447488_116448425_116448529_116450002_116451097_116575616
ES.24044.57	chr4	+	2811	12	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	-8877	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.326613281369	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTAGTGCCCAGGA	NA	False	NA	29	True	AATAAA	-35	NA	116427118	116451096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116435504_116435640_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.58	chr4	+	1910	9	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	-4246	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.103077910768	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	NA	False	NA	11	True	AATAAA	-15	NA	116431749	116450901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116431812_116435310_116435459_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.59	chr4	+	2059	9	NNC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	-4237	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.276963613229	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTTTTTACTGAAGGA	NA	False	NA	11	True	AATAAA	-17	NA	116431758	116451078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116431812_116436443_116436517_116438446_116438641_116441695_116441825_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.6	chr4	+	4483	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	66	-2431	63	2423	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTAACTATTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	116364811	116397863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ES.24044.60	chr4	+	155	1	Intergenic	novelGene_19721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATTAATTATAATAT	NA	False	NA	NA	False	NA	NA	NA	116432338	116432493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116432300_116432500
ES.24044.61	chr4	+	2842	7	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-382	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.402573959052	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTTTACTGAAGGAA	NA	False	NA	12	True	AATAAA	-18	NA	116435613	116451079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116435640_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116448529_116450002
ES.24044.62	chr4	+	1818	6	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	23591	-12	-104	12	3prime_fragment	FALSE	canonical	3	323	junction_2	13.9341307586803	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAATTTTTTAGTGCC	NA	False	NA	24	True	AATAAA	-30	NA	116438445	116451091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.63	chr4	+	5420	5	ISM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	25726	178	2031	-178	3prime_fragment	FALSE	canonical	3	323	junction_1	14.7817454990945	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	NA	False	NA	11	True	AATAAA	-15	NA	116440580	116450901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ES.24044.64	chr4	+	386	2	ISM	ENSMUSG00000034042.17	ENSMUST00000106475.2	2642	12	33151	-53	9877	53	3prime_fragment	FALSE	canonical	3	329	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGTCTTGCTTAGCC	NA	False	NA	NA	False	NA	NA	NA	116448426	116450286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116448529_116450002
ES.24044.65	chr4	+	2222	1	NIC	ENSMUSG00000034042.17	novel	3588	12	NA	NA	10130	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-2	True	NA	11	True	AATAAA	-15	NA	116448679	116450901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116448700_116450900
ES.24044.66	chr4	+	162	1	Antisense	novelGene_ENSMUSG00000085408.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	4211	False	NA	NA	False	NA	NA	NA	116452892	116453054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116452900_116453100
ES.24044.67	chr4	+	177	2	Antisense	novelGene_ENSMUSG00000028693.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAATAAAAAATAAAA	4213	False	NA	NA	False	NA	NA	NA	116452894	116461055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116452992_116460975
ES.24044.68	chr4	+	2086	1	Intergenic	novelGene_19722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	116472040	116474126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116472000_116474100
ES.24044.69	chr4	+	5297	1	Antisense	novelGene_ENSMUSG00000028693.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCATGGTGACACACC	NA	False	NA	NA	False	NA	NA	NA	116472782	116478079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116472800_116478100
ES.24044.7	chr4	+	2017	9	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	26.7535044433435	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAGCAACAGTACAA	NA	False	NA	NA	False	AATAAA	-19	NA	116364812	116395432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116386972_116387609_116387733_116389754_116389976_116394996
ES.24044.70	chr4	+	3800	1	Antisense	novelGene_ENSMUSG00000028693.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGAGAATATCAAGTGA	NA	False	NA	NA	False	AAAACA	-3	NA	116477327	116481127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116477300_116481100
ES.24044.71	chr4	+	1921	2	Antisense	novelGene_ENSMUSG00000028693.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGAACTGGCAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	116480360	116482496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116480914_116481128
ES.24044.72	chr4	+	217	1	Intergenic	novelGene_19723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTATTTAGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	116485952	116486169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116486000_116486200
ES.24044.73	chr4	+	249	1	Intergenic	novelGene_19725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116487094	116487343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116487100_116487300
ES.24044.74	chr4	+	171	1	Intergenic	novelGene_19728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	116497362	116497533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116497400_116497500
ES.24044.75	chr4	+	1132	6	NNC	ENSMUSG00000028691.13	novel	636	5	NA	NA	-10703	242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9266.17147693696	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116532037	116556711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116532301_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.76	chr4	+	1147	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	-47	1194	-47	356	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTGTACCATTTACCT	NA	False	NA	NA	False	AAAAAG	-12	NA	116542693	116556825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.77	chr4	+	1553	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	4	737	4	-737	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATCTCCAAAGCCCCTG	NA	False	NA	94	True	NA	NA	NA	116542744	116557282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.78	chr4	+	923	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9381.99984225112	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542795	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548979_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.79	chr4	+	868	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9381.99984225112	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACTTGGTGATTCATTC	NA	False	NA	26	True	ATTAAA	-11	NA	116542795	116556707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116549031_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.8	chr4	+	2332	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	65	3165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.7377370115968	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTCTTGAGGG	NA	False	NA	NA	False	AATAAA	-10	NA	116364813	116398605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387537_116387733_116389754_116389976_116394996_116395118_116398080
ES.24044.80	chr4	+	6255	5	ISM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	55	1307	0	243	intron_retention	FALSE	canonical	3	22651	junction_3	551.616261544201	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913
ES.24044.81	chr4	+	5184	5	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	intron_retention	FALSE	canonical	3	22651	junction_2	745.102467785472	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116542858_116544603_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.82	chr4	+	6136	4	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	242	intron_retention	FALSE	canonical	3	22665	junction_2	702.6554395055	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116542795	116556711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116542858_116544603_116550203_116550913_116551045_116556367
ES.24044.83	chr4	+	924	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9400.40825921938	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542795	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549121_116550079_116550203_116550913_116551045_116556367
ES.24044.84	chr4	+	918	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9399.24659533944	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAACTTGGTGATTCAT	NA	False	NA	24	True	ATTAAA	-9	NA	116542795	116556705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550920_116551045_116556367
ES.24044.85	chr4	+	917	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	1	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9229.99602600131	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTTGGTGATTCA	NA	False	NA	23	True	ATTAAA	-8	NA	116542796	116556704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551039_116556367
ES.24044.86	chr4	+	914	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	1	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9400.40825921938	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542796	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550094_116550203_116550913_116551045_116556367
ES.24044.88	chr4	+	5125	1	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	1	-2268	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2628	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	116542796	116547921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116542800_116547900
ES.24044.89	chr4	+	922	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	1	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9399.24659533944	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542796	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550196_116550913_116551045_116556367
ES.24044.9	chr4	+	2059	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	69	2968	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCATGGCCAACGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	116364817	116398408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
ES.24044.90	chr4	+	1880	5	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	1	239	intron_retention	FALSE	canonical	3	22665	junction_3	695.546008542929	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGGTGATTCATTCT	NA	False	NA	27	True	ATTAAA	-12	NA	116542796	116556708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116542858_116544603_116544721_116548972_116550203_116550913_116551045_116556367
ES.24044.92	chr4	+	2239	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	57	-2	2	2	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTCATTGGGTATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	116542797	116558021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.93	chr4	+	5167	5	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	2	241	intron_retention	FALSE	canonical	0	0	junction_3	10254.538958432	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542797	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116549127_116550079_116550190_116550913_116551045_116556367
ES.24044.95	chr4	+	914	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	3	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9399.24659533944	2698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGATTCATTCTTT	NA	False	NA	29	True	ATTAAA	-14	NA	116542798	116556710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550190_116550913_116551045_116556367
ES.24044.98	chr4	+	927	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	59	1308	4	242	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGATTCATTCTTTA	NA	False	NA	30	True	ATTAAA	-15	NA	116542799	116556711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ES.24044.99	chr4	+	930	6	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	4	239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9400.40825921938	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGGTGATTCATTCT	NA	False	NA	27	True	ATTAAA	-12	NA	116542799	116556708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116542858_116544603_116544721_116548972_116549127_116550073_116550203_116550913_116551045_116556367
ES.24045.1	chr4	+	3090	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	-46	-11	-46	11	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTGTATAGCTCT	NA	False	NA	14	True	ATTAAA	-27	NA	116578098	116661450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.10	chr4	+	3124	10	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	-613	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	16.3624079848208	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTTAGCCTTATTTGT	1486	False	NA	NA	False	AATAAA	-15	NA	116598266	116661297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658649_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.11	chr4	+	175	1	Intergenic	novelGene_19740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	5466	False	NA	NA	False	NA	NA	NA	116602246	116602421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116602200_116602400
ES.24045.12	chr4	+	177	1	Intergenic	novelGene_19742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTAGAAAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	116610228	116610405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116610200_116610400
ES.24045.13	chr4	+	1292	2	Intergenic	novelGene_19743	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGAATGTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	116628147	116631304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116628270_116630134
ES.24045.14	chr4	+	172	1	Intergenic	novelGene_19744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACGACT	NA	False	NA	NA	False	NA	NA	NA	116632421	116632593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116632400_116632600
ES.24045.15	chr4	+	119	1	Intergenic	novelGene_19745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAGA	4630	False	NA	NA	False	NA	NA	NA	116642441	116642560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116642400_116642600
ES.24045.16	chr4	+	210	1	Intergenic	novelGene_19747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTGAAGCCTGAAGT	5046	False	NA	NA	False	NA	NA	NA	116656567	116656777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116656600_116656800
ES.24045.17	chr4	+	1793	16	NNC	ENSMUSG00000028687.18	novel	1483	14	NA	NA	-367	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	50.334437073991	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664552	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664742_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.18	chr4	+	3907	6	NNC	ENSMUSG00000028687.18	novel	1483	14	NA	NA	-346	0	intron_retention	FALSE	canonical	1	7	junction_1	78.0451151578367	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664573	116676628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664742_116671515_116671634_116672760_116672910_116672995_116673552_116673632_116674297_116674376
ES.24045.19	chr4	+	3777	6	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	103	junction_1	40.00799920016	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664917	116676628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673552_116673632_116674773_116674865
ES.24045.2	chr4	+	3123	4	NNC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	3	-47319	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.4236347876812	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGAATGTGACTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	116578147	116612141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116578454_116598812_116599116_116608301_116608424_116609749
ES.24045.20	chr4	+	1663	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	59.5134345243903	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664928	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.21	chr4	+	1985	15	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-6	1	intron_retention	FALSE	canonical	1	1	junction_11	63.7332210812207	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	27	True	AATAAA	-17	NA	116664928	116676629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674623_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.22	chr4	+	1520	14	NIC	ENSMUSG00000028687.18	novel	2047	13	NA	NA	-4	-634	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	66.2169645221868	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGCGGCTGACCATAG	NA	False	NA	NA	False	NA	NA	NA	116664930	116675335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.23	chr4	+	1936	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	57	junction_1	44.8184485824011	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664932	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.24	chr4	+	1657	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.416810250683	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664933	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668996_116669089_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.25	chr4	+	1639	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	14	1	-1	-1	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664933	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.26	chr4	+	1768	14	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	20	junction_4	54.6237263402081	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664933	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.27	chr4	+	3327	10	NIC	ENSMUSG00000028687.18	novel	1931	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	103	junction_1	35.5114309539205	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664934	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673552_116673632_116673894_116673974_116674073_116674151_116674432_116674580_116674773_116674865
ES.24045.28	chr4	+	1743	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.4300009186111	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664935	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668032_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.29	chr4	+	1559	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	52.7655577212319	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTTGGAGAACTTTC	NA	False	NA	24	True	AATAAA	-14	NA	116664938	116676626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.3	chr4	+	2885	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	9	139	9	1	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTAGCCTTATTTGTACC	NA	False	NA	NA	False	AATAAA	-18	NA	116578153	116661300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.30	chr4	+	2554	11	NNC	ENSMUSG00000028687.18	novel	1931	14	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_1	90.6441393582619	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664938	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668996_116669089_116671515_116671634_116672760_116672910_116672995_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674593_116674773_116674865_116675480_116676451
ES.24045.31	chr4	+	2114	14	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-1	intron_retention	FALSE	canonical	3	103	junction_1	30.8182302154012	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664938	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.32	chr4	+	2816	12	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-1	intron_retention	FALSE	canonical	3	20	junction_4	59.2331155982114	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664938	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.33	chr4	+	1620	14	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_6	76.0602377284847	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664938	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673705_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.34	chr4	+	1753	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	59.4809580874417	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGTGTGTGTGTGTAT	NA	False	NA	NA	False	AAGAAA	-21	NA	116664939	116675969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116675766
ES.24045.35	chr4	+	4412	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.4300009186111	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGGGCTTTCTCTA	NA	False	NA	37	True	AATAAA	-27	NA	116664939	116676639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116665527_116665929_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.36	chr4	+	1546	15	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	68.1599634114111	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCCTTTGGAGAACTTT	NA	False	NA	23	True	AATAAA	-13	NA	116664939	116676625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674286_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.37	chr4	+	1816	18	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	67.5934826202465	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCCTTTGGAGAACTTT	NA	False	NA	23	True	AATAAA	-13	NA	116664939	116676625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668045_116668139_116668996_116669089_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.38	chr4	+	2912	15	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_11	64.5428587238348	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTCTGGGCTTTCTC	NA	False	NA	35	True	AATAAA	-25	NA	116664940	116676637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674299_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.39	chr4	+	3869	11	NNC	ENSMUSG00000028687.18	novel	2047	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	3	junction_1	92.7665888129988	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664940	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667792_116667886_116668045_116668139_116668996_116669089_116671515_116671634_116672760_116672910_116672995_116673552_116673632_116674297_116674376_116674773_116674865_116675003_116675084
ES.24045.4	chr4	+	2883	10	NIC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	9	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	16.0400732734387	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATTTTGCTGTATA	NA	False	NA	9	True	ATTAAA	-22	NA	116578153	116661445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.40	chr4	+	2178	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	-1	intron_retention	TRUE	canonical	1	2	junction_3	85.2965186496495	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664940	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667792_116667886_116668045_116668139_116668948_116669025_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.41	chr4	+	1735	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTCTGGGCTTTCTC	NA	False	NA	35	True	AATAAA	-25	NA	116664940	116676637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.42	chr4	+	1431	14	ISM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	21	1377	-4	-718	5prime_fragment	FALSE	canonical	3	103	junction_1	30.7634609974947	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTCCTCTTGTCTGT	NA	False	NA	NA	False	AAAAAG	-18	NA	116664940	116675251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.43	chr4	+	1801	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-3	1	intron_retention	FALSE	canonical	3	57	junction_1	44.8218200830305	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	27	True	AATAAA	-17	NA	116664941	116676629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.44	chr4	+	1834	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	103	junction_1	29.7890542834451	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664941	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.45	chr4	+	3386	14	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	4	junction_1	73.2578327496221	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664943	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667796_116667886_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.46	chr4	+	1817	18	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.0266913523616	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	27	True	AATAAA	-17	NA	116664943	116676629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667792_116667886_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.47	chr4	+	1604	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	66.9464130646461	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTTAATTATGTGTG	NA	False	NA	NA	False	AAGAAA	-12	NA	116664943	116675960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674623_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116675766
ES.24045.5	chr4	+	2581	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	15	437	-6	-297	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAAGACTTTCAACCTT	NA	False	NA	NA	False	TATAAA	-17	NA	116578159	116661002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.50	chr4	+	2518	11	NIC	ENSMUSG00000028687.18	novel	1931	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	57	junction_1	52.0188427399149	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664944	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673552_116673632_116674297_116674376_116674432_116674580_116674773_116674865_116675480_116676451
ES.24045.51	chr4	+	3843	5	NIC	ENSMUSG00000028687.18	novel	2047	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	103	junction_1	43.222534631833	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664944	116676628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673552_116673632
ES.24045.52	chr4	+	1603	15	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	1	-634	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.3903139080756	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGCGGCTGACCATAG	NA	False	NA	NA	False	NA	NA	NA	116664945	116675335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.53	chr4	+	1705	17	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.2141412388623	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGAGAACTTTCTGG	NA	False	NA	27	True	AATAAA	-17	NA	116664945	116676629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668948_116669025_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.54	chr4	+	1897	14	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_5	73.3776806915334	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTTGGAGAACTTTC	NA	False	NA	24	True	AATAAA	-14	NA	116664945	116676626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673343_116673552_116673632_116673705_116673779_116673894_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.55	chr4	+	1815	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_1	77.0542665917988	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664946	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667796_116667886_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.56	chr4	+	2208	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_1	68.3378535090342	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664946	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116667796_116667886_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.57	chr4	+	1665	16	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.080143629281	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAACTTTCTGGGCTTTC	NA	False	NA	33	True	AATAAA	-23	NA	116664946	116676635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675053_116675235_116675437_116675480_116676451
ES.24045.58	chr4	+	1928	14	NNC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	82.054967865933	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664946	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116664969_116668996_116669089_116671515_116671634_116672760_116672910_116672995_116673036_116673509_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
ES.24045.59	chr4	+	2143	12	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	4	-1	intron_retention	FALSE	canonical	3	103	junction_1	33.1492991337351	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	False	NA	25	True	AATAAA	-15	NA	116664948	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673552_116673632_116673705_116673779_116674297_116674376_116674432_116674580_116674773_116674865_116675235_116675437_116675480_116676451
ES.24045.6	chr4	+	3077	21	Fusion	ENSMUSG00000033985.18_ENSMUSG00000028687.18	novel	1483	14	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_9	76.4468933312532	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTTGGAGAACTTTC	NA	False	NA	24	True	AATAAA	-14	NA	116578174	116676626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.60	chr4	+	2138	14	ISM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	31	660	6	-1	intron_retention	FALSE	canonical	3	103	junction_1	30.7634609974947	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATGTGTGTGTGTGTA	NA	False	NA	NA	False	AAGAAA	-20	NA	116664950	116675968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ES.24045.61	chr4	+	3532	8	NIC	ENSMUSG00000028687.18	novel	1931	14	NA	NA	-117	-1	intron_retention	FALSE	canonical	3	163	junction_3	23.1208007770369	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	2903	False	NA	25	True	AATAAA	-15	NA	116671398	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116671634_116672760_116672910_116672995_116673552_116673632_116673894_116673974_116674297_116674376_116674432_116674580_116674773_116674865
ES.24045.63	chr4	+	1787	10	NIC	ENSMUSG00000028687.18	novel	1483	14	NA	NA	1452	-1	intron_retention	FALSE	canonical	3	162	junction_8	19.3454623511625	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	4530	False	NA	25	True	AATAAA	-15	NA	116673025	116676627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.64	chr4	+	1301	12	ISM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	8238	-2	1584	2	3prime_fragment	FALSE	canonical	3	162	junction_10	18.5961872925119	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGAGAACTTTCTGGG	4662	False	NA	28	True	AATAAA	-18	NA	116673157	116676630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ES.24045.7	chr4	+	2839	11	NNC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	10	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.2837342154679	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATAAAGTTGAT	NA	False	NA	NA	False	TTTAAA	-25	NA	116578175	116661269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116578454_116598812_116599116_116608301_116608431_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24045.8	chr4	+	3622	5	ISM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	56	9260	35	-7281	5prime_fragment	FALSE	canonical	3	48	junction_2	3.19178633370093	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTTTGTTTGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	116578200	116652179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284
ES.24045.9	chr4	+	2861	12	NNC	ENSMUSG00000033985.18	novel	3033	11	NA	NA	106	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.4583683584609	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAGTTAGCCTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	116578271	116661294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116578454_116598812_116599116_116608301_116608424_116627661_116627762_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ES.24046.1	chr4	+	178	1	Intergenic	novelGene_19750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATATAACATGG	3599	False	NA	NA	False	NA	NA	NA	116715502	116715680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116715500_116715700
ES.24047.1	chr4	-	3297	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	29	1693	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	116413103	116407136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409420_116410082_116410927_116411964_116412101_116413069
ES.24047.10	chr4	-	1600	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAGAGTTGCCTTGGTC	NA	False	NA	-110	True	NA	NA	NA	116413099	116408831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409415_116410075_116410927_116411964_116412101_116413069
ES.24047.11	chr4	-	1804	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-5	-825	-4	-225	multi-exon	FALSE	canonical	3	51	junction_2	6.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTATTTCAA	NA	False	NA	NA	False	NA	NA	NA	116413137	116409326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116410927_116411964_116412101_116413069
ES.24047.12	chr4	-	1878	3	NNC	ENSMUSG00000055900.15	novel	974	3	NA	NA	-1117	-226	intron_retention	FALSE	canonical	0	0	junction_2	32	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	116414250	116409327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116410927_116411964_116412101_116414107
ES.24047.13	chr4	-	1644	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	17	-226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	116413115	116409327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409541_116409677_116410927_116411964_116412101_116413069
ES.24047.14	chr4	-	332	2	NNC	ENSMUSG00000055900.15	novel	593	2	NA	NA	-11	-227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATTATTTC	NA	False	NA	NA	False	NA	NA	NA	116410323	116409328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409420_116410082
ES.24047.15	chr4	-	888	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	5	81	5	-81	multi-exon	FALSE	canonical	3	51	junction_2	6.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAGAAATATAAAAATAC	NA	False	NA	NA	False	AAAAAG	-19	NA	116413127	116410232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116410927_116411964_116412101_116413069
ES.24047.2	chr4	-	1763	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	-26	101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGGATTGTCTAAGCC	NA	False	NA	-7	True	AATAAA	-26	NA	116413159	116408728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409415_116410075_116410927_116411964_116412101_116413069
ES.24047.3	chr4	-	2400	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	-3	-1423	-2	101	multi-exon	FALSE	canonical	3	51	junction_2	6.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGGATTGTCTAAGCC	NA	False	NA	-7	True	AATAAA	-26	NA	116413135	116408728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116410927_116411964_116412101_116413069
ES.24047.4	chr4	-	2191	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	5	98	intron_retention	TRUE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTCTGGATTGTCTAA	NA	False	NA	-10	True	AATAAA	-23	NA	116413127	116408731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409308_116409505_116410927_116411964_116412101_116413069
ES.24047.5	chr4	-	2261	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	-1102	98	intron_retention	FALSE	non_canonical	0	0	junction_1	30.169889330626	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTCTGGATTGTCTAA	NA	False	NA	-10	True	AATAAA	-23	NA	116414235	116408731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409308_116409505_116410927_116411964_116412101_116414107
ES.24047.6	chr4	-	2060	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	-2	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.6204433144888	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTCTGGATTGTCTAA	NA	False	NA	-10	True	AATAAA	-23	NA	116413135	116408731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409333_116409669_116410927_116411964_116412101_116413069
ES.24047.7	chr4	-	2127	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	-1117	88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.169889330626	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTTTAGCACTTCTG	NA	False	NA	-20	True	AATAAA	-13	NA	116414250	116408741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409333_116409669_116410927_116411964_116412101_116414107
ES.24047.8	chr4	-	1973	5	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.1150734156725	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-106	True	NA	NA	NA	116413138	116408827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116409308_116409505_116409557_116409689_116410927_116411964_116412101_116413069
ES.24048.1	chr4	-	2119	9	Antisense	novelGene_ENSMUSG00000034042.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTGCCCGGCCCAC	NA	False	NA	NA	False	NA	NA	NA	116445833	116414914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116415025_116426359_116427378_116428066_116428179_116430588_116430719_116431531_116431812_116436443_116436515_116438444_116438636_116444559_116444707_116445773
ES.24048.2	chr4	-	6009	1	Intergenic	novelGene_19720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116423184	116417175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116417200_116423200
ES.24049.1	chr4	-	2300	1	NIC	ENSMUSG00000085408.2	novel	2436	3	NA	NA	20	-5578	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCCTTTTTTCTTTT	9405	False	NA	NA	False	NA	NA	NA	116454807	116452507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116452500_116454800
ES.2405.1	chr10	-	184	1	Intergenic	novelGene_1830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAATGAGTACTTG	173	False	NA	NA	False	NA	NA	NA	18804895	18804711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_18804700_18804900
ES.24050.1	chr4	-	3588	15	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	-47	-561	-47	4	intron_retention	TRUE	canonical	3	774	junction_12	215.450595691155	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTCTGGAATTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	116485185	116458244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.10	chr4	-	8089	8	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-5612	1	intron_retention	FALSE	canonical	3	1005	junction_6	149.17938797273	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGTTCTGGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	116469057	116458247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116462012_116462105_116462192_116462880
ES.24050.12	chr4	-	5553	10	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	13588	-557	-8105	0	intron_retention	FALSE	canonical	3	898	junction_9	170.844597641277	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116471550	116458248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599
ES.24050.13	chr4	-	3112	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	328.230910506986	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116484690	116458248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461282_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.17	chr4	-	7515	5	NNC	ENSMUSG00000028693.16	novel	1216	7	NA	NA	-3404	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	528.329146933992	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116466849	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116460883_116461081_116461259_116461359_116462012_116462105_116462192_116462880
ES.24050.18	chr4	-	4169	12	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	1	-3	intron_retention	FALSE	canonical	3	774	junction_9	197.249852046158	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116484689	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.19	chr4	-	3691	10	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-8105	-3	intron_retention	FALSE	canonical	3	842	junction_9	202.752235834287	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116471550	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526
ES.24050.2	chr4	-	3565	14	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	679	4	intron_retention	FALSE	canonical	3	12	junction_13	354.241434734617	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTCTGGAATTATAT	NA	False	NA	NA	False	AATAAA	-20	NA	116483966	116458244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483926
ES.24050.20	chr4	-	9090	10	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	-3	intron_retention	FALSE	canonical	3	774	junction_7	214.413642001957	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116484690	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116459418_116459922_116460142_116461091_116461259_116461359_116462012_116462105_116462192_116462880_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.21	chr4	-	2967	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	676	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	347.188658060303	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116483969	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483926
ES.24050.22	chr4	-	2339	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	344.824149208768	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGCCCTTGTTCTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	116484690	116458251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116467828_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.23	chr4	-	3118	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.342947754954	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAAGCCCTTGTTCTGG	NA	False	NA	NA	False	AATAAA	-12	NA	116484690	116458252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459451_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.24	chr4	-	3114	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	-41	-553	-41	-4	multi-exon	FALSE	canonical	3	22	junction_15	334.076930594669	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAAGCCCTTGTTCTGG	NA	False	NA	NA	False	AATAAA	-12	NA	116485179	116458252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ES.24050.25	chr4	-	3008	14	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	679	4	intron_retention	FALSE	canonical	3	12	junction_13	354.241434734617	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTGATGGCTTTTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	116483966	116458801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483926
ES.24050.28	chr4	-	2562	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	-39	-3	-39	3	multi-exon	FALSE	canonical	3	22	junction_15	334.076930594669	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGATGGCTTTTTT	NA	False	NA	-4	True	AATAAA	-18	NA	116485177	116458802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ES.24050.29	chr4	-	7771	13	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	1	3	intron_retention	FALSE	canonical	3	774	junction_10	207.407542989374	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTGATGGCTTTTTT	NA	False	NA	-4	True	AATAAA	-18	NA	116484693	116458802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.30	chr4	-	2579	16	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	420.300400507383	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTGATGGCTTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	116484693	116458803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483559_116483602_116484528
ES.24050.31	chr4	-	3187	14	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-55	2	intron_retention	FALSE	canonical	3	774	junction_11	207.002729879378	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTTGATGGCTTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	116484749	116458803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.33	chr4	-	3785	9	NNC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-2233	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	412.508409005198	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCTTTGATGGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	116465678	116458806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461282_116461359_116461549_116461937_116462012_116462105_116462192_116462880
ES.24050.34	chr4	-	4852	8	NIC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-2935	-2	intron_retention	FALSE	canonical	3	1005	junction_6	149.17938797273	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGGCTTTGATGGCT	NA	False	NA	-9	True	AATAAA	-13	NA	116466380	116458807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116462012_116462105_116462192_116462880
ES.24050.35	chr4	-	3253	8	NIC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-1624	-2	intron_retention	FALSE	canonical	3	1005	junction_6	130.189657572234	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGGCTTTGATGGCT	NA	False	NA	-9	True	AATAAA	-13	NA	116465069	116458807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461549_116461937_116462012_116462105_116462192_116462880
ES.24050.37	chr4	-	4630	9	NNC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-3105	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	426.62657485792	730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGAGGCTTTGATGGC	NA	False	NA	-10	True	AATAAA	-12	NA	116466550	116458808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459416_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880
ES.24050.4	chr4	-	3691	14	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-1	3	intron_retention	FALSE	canonical	3	774	junction_11	207.002729879378	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116484695	116458245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.41	chr4	-	3512	13	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	774	junction_10	215.242692481456	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116484691	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.42	chr4	-	3877	14	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	346.400800797139	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116484694	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460883_116461081_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.43	chr4	-	3861	7	NIC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-2140	-4	intron_retention	FALSE	canonical	3	1030	junction_6	112.702780208239	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116465585	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461549_116461937_116462192_116462880
ES.24050.44	chr4	-	2406	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	679	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	347.188658060303	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116483966	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483926
ES.24050.45	chr4	-	2027	10	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-5118	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	410.003914464903	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116468563	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462034_116462105_116462192_116462880_116462961_116467599
ES.24050.46	chr4	-	2453	16	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	674	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	420.151856145159	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116483971	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116483559_116483602_116483926
ES.24050.47	chr4	-	1553	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	4	561	0	-4	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116484690	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.48	chr4	-	2508	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	435.162343621461	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGAGGCTTTGATGG	NA	False	NA	-11	True	AATAAA	-11	NA	116484693	116458809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476163_116479963_116480004_116484528
ES.24050.5	chr4	-	2149	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	-28	-3	-28	3	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116484722	116458245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.51	chr4	-	2520	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	338.325890471399	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAGCTGAGGCTTTGAT	NA	False	NA	-13	True	AATAAA	-9	NA	116484690	116458811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460136_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.52	chr4	-	2555	15	NNC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	349.644024512862	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAGCTGAGGCTTTGAT	NA	False	NA	-13	True	AATAAA	-9	NA	116484693	116458811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484502
ES.24050.53	chr4	-	2521	14	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	448	309	0	-309	internal_fragment	FALSE	canonical	3	774	junction_11	209.598206776737	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTCAACAATTTATTT	NA	False	NA	NA	False	AATATA	-10	NA	116484690	116459114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.54	chr4	-	600	1	NIC	ENSMUSG00000028693.16	novel	2118	14	NA	NA	0	-8308	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACGAGGATGGAGGCT	NA	False	NA	NA	False	NA	NA	NA	116484690	116484090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116484100_116484700
ES.24050.6	chr4	-	7816	9	ISM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	15523	-3	-5726	3	intron_retention	FALSE	canonical	3	1005	junction_7	144.696881445317	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116469171	116458245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880
ES.24050.7	chr4	-	3394	14	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	3	intron_retention	FALSE	canonical	3	774	junction_11	209.598206776737	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116484694	116458245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.8	chr4	-	3600	13	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_7	372.414746023242	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTTCTGGAATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	116484690	116458245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ES.24050.9	chr4	-	5142	8	NNC	ENSMUSG00000028693.16	novel	1461	13	NA	NA	-2643	1	intron_retention	TRUE	canonical	3	8	junction_6	459.162191787768	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCTTGTTCTGGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	116466088	116458247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116462034_116462105_116462192_116462880
ES.24051.1	chr4	-	132	1	Intergenic	novelGene_19724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACAACTAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	116486322	116486190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116486200_116486300
ES.24052.1	chr4	-	178	1	Intergenic	novelGene_19726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATGGGAAGAAC	NA	False	NA	NA	False	NA	NA	NA	116493442	116493264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116493300_116493400
ES.24053.1	chr4	-	1416	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	4	0	4	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508873	116493706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ES.24053.10	chr4	-	1317	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	92	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	565.339941981813	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTTGTGTGCCTGACT	NA	False	NA	-3	True	AATAAA	-13	NA	116508785	116493708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116493867_116494958_116495037_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ES.24053.13	chr4	-	172	1	Intergenic	novelGene_19727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	116495904	116495732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116495700_116495900
ES.24053.14	chr4	-	3575	1	NIC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	53	-8951	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGCTCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	116508824	116505249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116505200_116508800
ES.24053.2	chr4	-	1730	7	NNC	ENSMUSG00000028692.15	novel	2227	8	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	632.719110049809	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTGTGTGCCTGACTT	NA	False	NA	-2	True	AATAAA	-14	NA	116508594	116493707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116494508_116496044_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ES.24053.3	chr4	-	2228	8	NNC	ENSMUSG00000028692.15	novel	2227	8	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	579.696648327065	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTGTGTGCCTGACTT	NA	False	NA	-2	True	AATAAA	-14	NA	116508599	116493707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502705_116502791_116508535
ES.24053.5	chr4	-	934	7	NIC	ENSMUSG00000028692.15	novel	2227	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	763.551569967609	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTGTGTGCCTGACTT	NA	False	NA	-2	True	AATAAA	-14	NA	116508599	116493707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116493867_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116502700_116502791_116508535
ES.24053.7	chr4	-	1279	8	NIC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	52	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	585.899030097668	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTTGTGTGCCTGACT	NA	False	NA	-3	True	AATAAA	-13	NA	116508825	116493708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116493867_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ES.24053.9	chr4	-	1322	9	NNC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	87	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	561.663363924513	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTTGTGTGCCTGACT	NA	False	NA	-3	True	AATAAA	-13	NA	116508790	116493708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497015_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ES.24054.1	chr4	-	171	1	Intergenic	novelGene_19729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACATTTATTTAG	NA	False	NA	NA	False	NA	NA	NA	116529028	116528857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116528900_116529000
ES.24055.1	chr4	-	192	1	Intergenic	novelGene_19730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	116532835	116532643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116532600_116532800
ES.24056.1	chr4	-	178	1	Intergenic	novelGene_19731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	116538428	116538250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116538200_116538400
ES.24056.11	chr4	-	2442	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	73	-409	-45	409	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGAAATTACAC	NA	False	NA	NA	False	NA	NA	NA	116565530	116559066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.12	chr4	-	1955	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	-1	152	-1	-152	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTTTGCCTGTTTGTT	NA	False	NA	1	True	AATACA	-34	NA	116565604	116559627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.13	chr4	-	1778	4	NNC	ENSMUSG00000028690.5	novel	2106	4	NA	NA	-44	-153	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	88.6002257333467	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTTTGCCTGTTTGT	NA	False	NA	0	True	AATACA	-33	NA	116565529	116559628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116561065_116561703_116561857_116563077_116563172_116565434
ES.24056.15	chr4	-	1791	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	25	290	25	-290	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTCATAGGATTATTT	NA	False	NA	NA	False	AATAGA	-32	NA	116565578	116559765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.17	chr4	-	1541	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	22	543	22	-543	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTTGCTAGTTATGA	NA	False	NA	NA	False	NA	NA	NA	116565581	116560018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.18	chr4	-	1373	4	NNC	ENSMUSG00000028690.5	novel	2106	4	NA	NA	-43	-544	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_2	82.7325006673113	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTTTGCTAGTTATG	NA	False	NA	NA	False	NA	NA	NA	116565528	116560019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116561065_116561814_116561854_116563077_116563273_116565434
ES.24056.19	chr4	-	1349	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	75	682	-43	-682	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGGCTTTGTGTAGTA	NA	False	NA	NA	False	NA	NA	NA	116565528	116560157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.2	chr4	-	167	2	Antisense	novelGene_ENSMUSG00000082841.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	116718644	116538251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116538288_116718513
ES.24056.20	chr4	-	1967	1	Intergenic	novelGene_19735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116565368	116563401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116563400_116565400
ES.24056.21	chr4	-	198	1	Intergenic	novelGene_19736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCACTTCCCTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	116574457	116574259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116574300_116574500
ES.24056.22	chr4	-	314	1	Intergenic	novelGene_19737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGATTAGAGCTGTTC	2311	False	NA	NA	False	NA	NA	NA	116595313	116594999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116595000_116595300
ES.24056.23	chr4	-	211	1	Intergenic	novelGene_19738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACTGTGATTCTCAAGA	2312	False	NA	NA	False	NA	NA	NA	116595312	116595101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116595100_116595300
ES.24056.24	chr4	-	2090	1	Intergenic	novelGene_19739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAAGTAGGCTAGGCTG	9004	False	NA	NA	False	AATACA	-31	NA	116603059	116600969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116601000_116603100
ES.24056.26	chr4	-	2644	2	Antisense	novelGene_ENSMUSG00000033985.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAAGTAGGCTAGGCTG	8278	False	NA	NA	False	AATACA	-31	NA	116603785	116600969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116602906_116603077
ES.24056.27	chr4	-	180	1	Intergenic	novelGene_19741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGTGAGCAGGGAC	7179	False	NA	NA	False	NA	NA	NA	116608110	116607930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116607900_116608100
ES.24056.28	chr4	-	1510	10	NIC	ENSMUSG00000028688.14	novel	1209	9	NA	NA	20	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.2116508048004	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAATAGTTCCTTTGGGT	1993	False	NA	NA	False	AATAGA	-43	NA	116664783	116651490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116651706_116656339_116656406_116662005_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ES.24056.29	chr4	-	171	1	Intergenic	novelGene_19746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTTAAAAAAACA	7120	False	NA	NA	False	NA	NA	NA	116652436	116652265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116652300_116652400
ES.24056.3	chr4	-	1725	1	Antisense	novelGene_ENSMUSG00000028691.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAACAAAAA	5924	False	NA	NA	False	NA	NA	NA	116551531	116549806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116549800_116551500
ES.24056.30	chr4	-	1991	9	NNC	ENSMUSG00000028688.14	novel	659	6	NA	NA	2	-3775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.3722083593721	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAACAA	2033	False	NA	NA	False	NA	NA	NA	116664743	116655281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116656265_116656339_116656406_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ES.24056.31	chr4	-	3503	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	1	1461	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTCTTGTCCATTTCA	2032	False	NA	NA	False	AATATA	-18	NA	116664744	116659737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
ES.24056.32	chr4	-	3507	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	43	-1460	9	1460	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTCTTGTCCATTTC	1982	False	NA	NA	False	AATATA	-17	NA	116664794	116659738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ES.24056.33	chr4	-	2087	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	2	1	2	-1	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	1941	False	NA	-1	True	TTTAAA	-41	NA	116664835	116661199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ES.24056.34	chr4	-	2465	5	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	16	-1	intron_retention	FALSE	canonical	3	103	junction_2	13.9014387744578	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	2047	False	NA	-1	True	TTTAAA	-41	NA	116664729	116661199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116662253_116662328_116662492_116662682_116663724_116663813_116663957_116664664
ES.24056.35	chr4	-	1284	10	NNC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	54.8886639671505	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTTATTTCTTAT	2030	False	NA	-1	True	TTTAAA	-41	NA	116664746	116661199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116661334_116662005_116662253_116662328_116662492_116662682_116662832_116662918_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
ES.24056.36	chr4	-	2019	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	21	-3	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGGTTATTTCTT	2052	False	NA	-3	True	TTTAAA	-39	NA	116664724	116661201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
ES.24056.38	chr4	-	2111	7	NNC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	265	3	intron_retention	FALSE	canonical	2	4	junction_6	44.3433572627664	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCATTCTTTGGTTATT	2296	False	NA	-7	True	TTTAAA	-35	NA	116664480	116661205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663724_116663813_116663957_116664409
ES.24056.39	chr4	-	1476	2	ISM	ENSMUSG00000028688.14	ENSMUST00000134612.8	780	4	925	-1267	-70	3	3prime_fragment	FALSE	canonical	3	103	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCATTCTTTGGTTATT	3904	False	NA	-7	True	TTTAAA	-35	NA	116662872	116661205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116662492_116662682
ES.24056.4	chr4	-	214	2	Intergenic	novelGene_19732	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	116686246	116553465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116553601_116686167
ES.24056.40	chr4	-	2009	8	NNC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	237	3	intron_retention	FALSE	canonical	2	4	junction_7	42.0500188065672	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCATTCTTTGGTTATT	2268	False	NA	-7	True	TTTAAA	-35	NA	116664508	116661205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664409
ES.24056.41	chr4	-	1272	9	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	10	-34	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	38.7021882456277	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAACAGAAA	2041	False	NA	-44	True	NA	NA	NA	116664735	116661242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116661334_116662005_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ES.24056.42	chr4	-	1666	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	137	1	137	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGCCTCTGTGTCT	7225	False	NA	-7	True	AATAAA	-25	NA	116678767	116677101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116677100_116678800
ES.24056.43	chr4	-	176	1	Intergenic	novelGene_19748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	116686247	116686071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116686100_116686200
ES.24056.44	chr4	-	154	1	Intergenic	novelGene_19749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGTAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	116708602	116708448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116708400_116708600
ES.24056.5	chr4	-	176	2	Antisense	novelGene_ENSMUSG00002075917.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	45	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCAATT	9986	False	NA	NA	False	NA	NA	NA	116641630	116553504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116553631_116641580
ES.24056.6	chr4	-	4358	6	NNC	ENSMUSG00000028690.5	novel	2106	4	NA	NA	50	2733	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	92.7525740882699	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGCCTTTAAAGAATG	NA	False	NA	NA	False	AATAAA	-18	NA	116565553	116556742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116559060_116559388_116559496_116559597_116561065_116561703_116561857_116563077_116563273_116565434
ES.24056.9	chr4	-	3054	6	NNC	ENSMUSG00000028690.5	novel	2106	4	NA	NA	-45	1450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.7525740882699	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATTGGCCAAGTCCTA	NA	False	NA	NA	False	AATGAA	-2	NA	116565530	116558025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116559064_116559390_116559496_116559597_116561065_116561703_116561857_116563077_116563273_116565434
ES.24057.1	chr4	+	181	1	Intergenic	novelGene_19751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	1601	False	NA	NA	False	NA	NA	NA	116722673	116722854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116722700_116722900
ES.24058.1	chr4	+	5768	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-182	-4	-182	4	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTCTCAGTAAATG	NA	False	NA	NA	False	AATAAA	-38	NA	116734390	116846465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.10	chr4	+	2361	1	Antisense	novelGene_ENSMUSG00000082207.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116803550	116805911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_116803600_116805900
ES.24058.11	chr4	+	5964	12	ISM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	81402	-1527	81402	1527	3prime_fragment	FALSE	canonical	3	19	junction_9	3.77464354400485	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATGAGAGCTGGGTGT	8235	False	NA	NA	False	AATAAA	-21	NA	116815974	116847988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.12	chr4	+	220	1	Intergenic	novelGene_19754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGACGTCTTTCACTT	NA	False	NA	NA	False	NA	NA	NA	116818513	116818733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116818500_116818700
ES.24058.14	chr4	+	176	1	Intergenic	novelGene_19755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	116826399	116826575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116826400_116826600
ES.24058.15	chr4	+	3046	3	ISM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	105753	1548	105753	-1548	3prime_fragment	FALSE	canonical	3	27	junction_2	1	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTTATAATTCCGACT	NA	False	NA	NA	False	NA	NA	NA	116840325	116844913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116842044_116842878_116842961_116843667
ES.24058.2	chr4	+	5276	12	NNC	ENSMUSG00000033948.4	novel	5582	14	NA	NA	-163	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	7.74383252328977	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTTTCTAAAAGCAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	116734409	116846444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836710_116841865_116842044_116842878_116842961_116843667
ES.24058.3	chr4	+	4197	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-151	1536	-151	-1536	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGACTCTGATTTGACGG	NA	False	NA	NA	False	NA	NA	NA	116734421	116844925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.4	chr4	+	7555	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-150	-1823	-150	1823	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTTTCTTAGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	116734422	116848284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.6	chr4	+	2790	12	NNC	ENSMUSG00000033948.4	novel	5582	14	NA	NA	-127	-7237	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	7.19618815533211	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGTTGTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	116734445	116839224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116839103
ES.24058.7	chr4	+	5550	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	-127	159	-127	-159	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGGCCCCTACACTG	NA	False	NA	NA	False	AATAAA	-14	NA	116734445	116846302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.8	chr4	+	5661	15	NNC	ENSMUSG00000033948.4	novel	5582	14	NA	NA	-118	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.24674451891668	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTCTCAGTAAATG	NA	False	NA	NA	False	AATAAA	-38	NA	116734454	116846465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116735087_116735129_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ES.24058.9	chr4	+	3984	14	NNC	ENSMUSG00000033948.4	novel	5582	14	NA	NA	-18	-1538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.45796901140974	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCGACTCTGATTTGAC	NA	False	NA	NA	False	NA	NA	NA	116734554	116844923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841957_116842044_116842878_116842961_116843667
ES.24059.1	chr4	-	152	1	Intergenic	novelGene_19752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	116741007	116740855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116740900_116741000
ES.2406.1	chr10	-	4446	9	FSM	ENSMUSG00000019850.12	ENSMUST00000019997.11	4422	9	-27	3	-27	0	multi-exon	FALSE	canonical	1	1	junction_1	0.927024810886958	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGATGCTTTCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	18891185	18876660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_18878764_18879323_18879506_18880204_18881080_18881298_18881480_18882610_18882782_18882929_18883078_18883892_18884084_18887228_18887539_18890900
ES.24060.1	chr4	-	179	1	Intergenic	novelGene_19753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGTGACATCACCTGT	4436	False	NA	NA	False	NA	NA	NA	116817075	116816896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116816900_116817100
ES.24061.1	chr4	-	5782	2	NNC	ENSMUSG00000028684.15	novel	539	3	NA	NA	989	5905	intron_retention	FALSE	non_canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116847873	116841256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116842042_116842876
ES.24061.11	chr4	-	3114	5	FSM	ENSMUSG00000028684.15	ENSMUST00000127635.8	511	5	-37	-2566	-2	-1	multi-exon	FALSE	canonical	3	335	junction_4	13.3510299228187	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGCATGTTCTTTTGT	NA	False	NA	-20	True	AATAAA	-15	NA	116851579	116847414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ES.24061.12	chr4	-	2802	6	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	340	junction_4	15.3544781741354	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGCATGTTCTTTTGT	NA	False	NA	-20	True	AATAAA	-15	NA	116851561	116847414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116850221_116850444_116850665_116850781
ES.24061.13	chr4	-	1124	9	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	116.039594535658	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGCATGTTCTTTTGT	NA	False	NA	-20	True	AATAAA	-15	NA	116851561	116847414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584_116850665_116850781_116850895_116851527
ES.24061.2	chr4	-	3708	2	Antisense	novelGene_ENSMUSG00000033948.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116845016	116841256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_116842413_116842464
ES.24061.3	chr4	-	2379	8	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	-11	7	intron_retention	FALSE	canonical	3	335	junction_7	15.9616888268153	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTTCCTTTTGTTA	NA	False	NA	-1	True	NA	NA	NA	116851588	116847154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ES.24061.4	chr4	-	1497	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	-8	0	-8	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTCCTTTGTTCCT	NA	False	NA	-8	True	NA	NA	NA	116851618	116847161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ES.24061.5	chr4	-	1240	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	16	233	16	19	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTATGTCCTGATCC	NA	False	NA	0	True	AATAAA	-35	NA	116851594	116847394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ES.24061.6	chr4	-	934	7	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	134.61477960792	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTCTTTTGTAAAGG	NA	False	NA	-15	True	AATAAA	-20	NA	116851559	116847409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116851527
ES.24061.7	chr4	-	1282	9	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	-3	4	intron_retention	FALSE	canonical	3	335	junction_8	16.5788834063094	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTCTTTTGTAAAGG	NA	False	NA	-15	True	AATAAA	-20	NA	116851557	116847409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ES.24061.9	chr4	-	915	8	NIC	ENSMUSG00000028684.15	novel	1489	10	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	161.748355825476	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTCTTTTGTAAAGG	NA	False	NA	-15	True	AATAAA	-20	NA	116851559	116847409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116850022_116850221_116850444_116850508_116850584_116850665_116851527
ES.24062.1	chr4	+	4528	20	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	-17	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	17.7699986827685	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACGTATATATATGG	NA	False	NA	NA	False	ATTAAA	-12	NA	116852496	116862467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.10	chr4	+	4861	19	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	5	3	intron_retention	FALSE	canonical	3	56	junction_7	9.00154307759385	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGGATGTCTATGG	NA	False	NA	NA	False	ATTAAA	-22	NA	116852518	116862477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.11	chr4	+	4993	18	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	10	-7	intron_retention	FALSE	canonical	3	56	junction_7	9.24671455727959	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACGTATATATATGG	NA	False	NA	NA	False	ATTAAA	-12	NA	116852523	116862467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.12	chr4	+	2917	17	NNC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	20	730	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	19.2012369393224	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAGAATGTGCTTT	NA	False	NA	4	True	AATAAA	-12	NA	116852533	116861376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855627_116857495_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.13	chr4	+	3898	19	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	20	730	intron_retention	FALSE	canonical	3	56	junction_6	8.35866520149104	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAGAATGTGCTTT	NA	False	NA	4	True	AATAAA	-12	NA	116852533	116861376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.15	chr4	+	3093	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	40	1450	40	378	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGCATACTAGCCTTC	NA	False	NA	NA	False	AAGAAA	-21	NA	116852553	116861024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.16	chr4	+	3753	18	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	159	730	intron_retention	FALSE	canonical	3	56	junction_7	9.24671455727959	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAGAATGTGCTTT	NA	False	NA	4	True	AATAAA	-12	NA	116852672	116861376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.17	chr4	+	1142	3	FSM	ENSMUSG00000046861.10	ENSMUST00000133234.2	400	3	-12	-730	-12	730	multi-exon	FALSE	canonical	3	67	junction_1	2	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAGAATGTGCTTT	NA	False	NA	4	True	AATAAA	-12	NA	116860040	116861376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116860213_116860315_116860388_116860478
ES.24062.2	chr4	+	3747	19	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	-14	738	intron_retention	FALSE	canonical	3	56	junction_7	9.14019747470169	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGCTTTTGGGATCC	NA	False	NA	12	True	AATAAA	-20	NA	116852499	116861384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.3	chr4	+	3515	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	-14	1082	-14	746	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGATCCCTGCTAAA	NA	False	NA	20	True	AATAAA	-28	NA	116852499	116861392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.4	chr4	+	4588	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	-4	-1	-4	1	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATATATGGATGTCTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	116852509	116862475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.5	chr4	+	3440	21	NNC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	-3	728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	17.2652106850742	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTTAGAATGTGCT	NA	False	NA	2	True	AATAAA	-10	NA	116852510	116861374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859791_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.6	chr4	+	3934	18	NNC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	-2	728	intron_retention	FALSE	canonical	0	0	junction_10	18.6995919871111	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTTAGAATGTGCT	NA	False	NA	2	True	AATAAA	-10	NA	116852511	116861374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856980_116857085_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.7	chr4	+	3859	18	NNC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	0	729	intron_retention	FALSE	non_canonical	0	0	junction_5	24.2960403739925	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTTAGAATGTGCTT	NA	False	NA	3	True	AATAAA	-11	NA	116852513	116861375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854320_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857548_116857793_116857914_116858018_116858109_116859312_116859791_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.8	chr4	+	3891	18	NIC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	0	728	intron_retention	FALSE	canonical	3	56	junction_7	8.90822099995746	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTTAGAATGTGCT	NA	False	NA	2	True	AATAAA	-10	NA	116852513	116861374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116857139_116857285_116857548_116857793_116857914_116858018_116858109_116859312_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24062.9	chr4	+	3493	21	NNC	ENSMUSG00000046861.10	novel	4583	21	NA	NA	1	731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	17.2162713733259	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAGAATGTGCTTTT	NA	False	NA	5	True	AATAAA	-13	NA	116852514	116861377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854536_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ES.24063.1	chr4	+	188	1	Intergenic	novelGene_19756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTAAAAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	116869611	116869799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116869600_116869800
ES.24064.1	chr4	+	1549	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	5	1	-1	-1	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGGCTCAGTGGTAGA	NA	False	NA	19	True	AATAAA	-19	NA	116876603	116944048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.11	chr4	+	1658	13	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	237.065084242	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876632	116944045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116898604_116898746_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.12	chr4	+	695	5	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	30	20345	30	-6410	5prime_fragment	FALSE	canonical	3	604	junction_1	58.4593876122561	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAACTAGATTATACTGT	NA	False	NA	NA	False	AATAAA	-26	NA	116876634	116910112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920
ES.24064.13	chr4	+	2951	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	43	-1439	37	985	multi-exon	FALSE	canonical	3	567	junction_7	49.9305302519377	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTCTATGTTGCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	116876641	116945488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.14	chr4	+	1616	13	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	243.345590444719	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGGCTCAGTGGTAGA	NA	False	NA	19	True	AATAAA	-19	NA	116876644	116944048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116877131_116877240_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.15	chr4	+	3755	10	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	46	313	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	269.338879664198	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTGATGATTGTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	116876650	116930770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
ES.24064.16	chr4	+	3674	11	NIC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	50	0	intron_retention	FALSE	canonical	3	567	junction_7	52.1559200858349	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876654	116944045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.17	chr4	+	3825	12	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	51	315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	247.873434779569	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGATGATTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	116876655	116930772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138_116929585_116929623
ES.24064.18	chr4	+	1763	12	NNC	ENSMUSG00000028683.15	novel	1369	10	NA	NA	69	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	190.972154086306	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCTCAGTGGTAG	NA	False	NA	18	True	AATAAA	-18	NA	116876673	116944047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876959_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ES.24064.2	chr4	+	3751	12	NNC	ENSMUSG00000028683.15	novel	3754	10	NA	NA	0	379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	247.873434779569	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCATTTTCATGGTGT	NA	False	NA	NA	False	TTTAAA	-6	NA	116876604	116930836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138_116929557_116929784
ES.24064.20	chr4	+	229	1	Intergenic	novelGene_19760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCCAGTCATGTCTCCA	NA	False	NA	NA	False	NA	NA	NA	116916755	116916984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116916800_116917000
ES.24064.21	chr4	+	138	1	Intergenic	novelGene_19761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116923319	116923457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_116923300_116923500
ES.24064.22	chr4	+	157	1	Genic_Genomic	ENSMUSG00000028683.15	novel	NA	NA	NA	NA	-106	-5747	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATAAATAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	116924553	116924710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_116924600_116924700
ES.24064.3	chr4	+	4065	10	FSM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	10	-321	10	321	multi-exon	FALSE	canonical	3	567	junction_7	51.7023771452448	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTCTTTTTGTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	116876614	116930778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835
ES.24064.4	chr4	+	5124	6	NIC	ENSMUSG00000028683.15	novel	3754	10	NA	NA	16	-3403	intron_retention	FALSE	canonical	2	9	junction_4	267.577727025251	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGAGACTTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	116876620	116927054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116915960_116916051_116922537
ES.24064.5	chr4	+	2326	10	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	16	2	intron_retention	FALSE	canonical	0	0	junction_4	275.660598258254	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCTCAGTGGTAG	NA	False	NA	18	True	AATAAA	-18	NA	116876620	116944047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901798_116915960_116916051_116922537_116923762_116925940_116926019_116927835_116927985_116938757_116938859_116943885
ES.24064.6	chr4	+	3905	11	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	16	321	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	193.1	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTCTTTTTGTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	116876620	116930778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
ES.24064.7	chr4	+	2623	4	ISM	ENSMUSG00000028683.15	ENSMUST00000106447.9	3754	10	18	26557	18	-12622	5prime_fragment	FALSE	canonical	3	604	junction_1	61.4220373047546	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116876622	116903900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632
ES.24064.8	chr4	+	2606	11	NNC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	20	-974	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	193.1	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGTCCTATACCTTTA	NA	False	NA	NA	False	NA	NA	NA	116876624	116929483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
ES.24064.9	chr4	+	1421	11	NIC	ENSMUSG00000028683.15	novel	1555	12	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	198.036966246204	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTGGCTCAGTGGT	NA	False	NA	16	True	AATAAA	-16	NA	116876624	116944045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116943885
ES.24065.1	chr4	-	159	1	Intergenic	novelGene_19757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	116885015	116884856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116884900_116885000
ES.24066.1	chr4	-	176	1	Intergenic	novelGene_19758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	116885231	116885055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116885100_116885200
ES.24067.1	chr4	-	217	1	Intergenic	novelGene_19759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTAAGGACTGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	116887637	116887420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116887400_116887600
ES.24068.1	chr4	+	4461	22	FSM	ENSMUSG00000028681.12	ENSMUST00000030443.12	4382	22	-78	-1	-78	1	multi-exon	FALSE	canonical	3	5	junction_3	13.5888776715328	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGGCTGGAGTTTTT	NA	False	NA	3	True	AATATA	-17	NA	116953193	116972581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.10	chr4	+	3204	14	NIC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	-2002	-1	intron_retention	FALSE	canonical	3	16	junction_1	10.2096369372536	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGATGGCTGGAGTTT	NA	False	NA	1	True	AATATA	-15	NA	116965429	116972579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.11	chr4	+	2519	10	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	13407	1	-732	-1	3prime_fragment	FALSE	canonical	3	29	junction_6	5.35412613473634	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGATGGCTGGAGTTT	NA	False	NA	1	True	AATATA	-15	NA	116966699	116972579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.12	chr4	+	3471	5	NNC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	1037	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.9774163883468	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGATGGCTGGAGT	NA	False	NA	-1	True	AATATA	-13	NA	116968468	116972577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116968603_116968711_116970946_116971089_116971352_116971439_116971540_116971836
ES.24068.3	chr4	+	4499	21	NIC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	-37	0	intron_retention	FALSE	canonical	3	5	junction_3	13.7436348903774	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116953234	116972580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.4	chr4	+	4387	22	NNC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	-28	-2	intron_retention	FALSE	canonical	1	1	junction_9	14.5415192573859	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCAGATGGCTGGAGTT	NA	False	NA	0	True	AATATA	-14	NA	116953243	116972578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965691_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.6	chr4	+	4880	20	NIC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	2	-7	intron_retention	FALSE	canonical	3	5	junction_2	13.2637844463537	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATCTCAGATGGCTG	NA	False	NA	-5	True	AATATA	-9	NA	116953294	116972573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.7	chr4	+	3425	19	NIC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	46	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.8603582363811	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGATGGCTGGAGTTT	NA	False	NA	1	True	AATATA	-15	NA	116962162	116972579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116962297_116962430_116962523_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967529_116967616_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.8	chr4	+	3319	16	NIC	ENSMUSG00000028681.12	novel	4382	22	NA	NA	-2348	-3	intron_retention	FALSE	canonical	0	0	junction_1	12.6325857298584	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGATGGCTGGAGT	NA	False	NA	-1	True	AATATA	-13	NA	116965083	116972577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_116965240_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24068.9	chr4	+	3167	15	ISM	ENSMUSG00000028681.12	ENSMUST00000144620.8	4356	22	12057	1	-2082	-1	3prime_fragment	FALSE	canonical	3	16	junction_1	9.83875095772646	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGATGGCTGGAGTTT	NA	False	NA	1	True	AATATA	-15	NA	116965349	116972579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ES.24069.1	chr4	-	2945	5	NIC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-30	5	intron_retention	FALSE	canonical	2	11	junction_4	7.69334127671456	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCAGCATTCAAGTTTC	9677	False	NA	-9	True	NA	NA	NA	116982885	116976410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ES.24069.11	chr4	-	2335	7	NIC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-30	246	intron_retention	FALSE	canonical	2	11	junction_6	7.27247474309048	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTTTTTTTGAG	9677	False	NA	NA	False	NA	NA	NA	116982885	116976827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116978059_116978167_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ES.24069.12	chr4	-	1772	7	NIC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	7.02376916856849	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAATATTTGTATTC	9691	False	NA	-24	True	NA	NA	NA	116982871	116977073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116982525
ES.24069.13	chr4	-	2777	7	NNC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-27	0	intron_retention	TRUE	canonical	1	2	junction_6	12.7758452644912	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAATATTTGTATTC	9680	False	NA	-24	True	NA	NA	NA	116982882	116977073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979526_116980925_116981924_116982525
ES.24069.14	chr4	-	1091	2	ISM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	1027	658	-38	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAATATTTGTATTC	NA	False	NA	-24	True	NA	NA	NA	116978500	116977073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116978059_116978394
ES.24069.15	chr4	-	1095	2	FSM	ENSMUSG00000073771.12	ENSMUST00000097915.4	1152	2	57	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAATATTTGTATTC	NA	False	NA	-24	True	NA	NA	NA	116979525	116977073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116978059_116979415
ES.24069.17	chr4	-	1990	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	-74	-296	33	-2	multi-exon	FALSE	canonical	2	11	junction_7	6.73401357108153	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGATGAATATTTGTAT	9673	False	NA	-26	True	NA	NA	NA	116982889	116977075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ES.24069.4	chr4	-	1749	2	ISM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	1028	-1	-37	1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATGTCAGCATTCAAG	NA	False	NA	-13	True	NA	NA	NA	116978499	116976414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_116978059_116978394
ES.24069.6	chr4	-	3550	8	NNC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	-33	0	intron_retention	FALSE	canonical	1	1	junction_7	12.0559918204812	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	9674	False	NA	-14	True	NA	NA	NA	116982888	116976415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979526_116980925_116980980_116981135_116982189_116982525
ES.2407.1	chr10	+	2213	1	FSM	ENSMUSG00000045591.7	ENSMUST00000053225.7	2072	1	-141	0	-141	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTTCGCTTAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	19232139	19234352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_19232100_19234400
ES.24070.1	chr4	-	3319	8	NIC	ENSMUSG00000028680.15	novel	2161	15	NA	NA	-32	0	intron_retention	FALSE	canonical	3	135	junction_6	17.0365753001941	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3187	False	NA	0	True	AATAAA	-13	NA	116991192	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116988351_116988569_116989194_116989923_116990700_116990848
ES.24070.10	chr4	-	2285	11	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-119	0	intron_retention	FALSE	canonical	0	0	junction_4	65.8489939179028	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3100	False	NA	0	True	AATAAA	-13	NA	116991279	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989194_116990385_116990503_116990591_116990700_116990848
ES.24070.11	chr4	-	2414	15	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	41.6376497601752	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3221	False	NA	0	True	AATAAA	-13	NA	116991158	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987880_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.12	chr4	-	2483	14	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	135	junction_9	17.1357268913424	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3222	False	NA	0	True	AATAAA	-13	NA	116991157	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.13	chr4	-	2009	8	NNC	ENSMUSG00000028680.15	novel	2161	15	NA	NA	1804	0	intron_retention	TRUE	canonical	0	0	junction_3	59.6195420639774	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	5187	False	NA	0	True	AATAAA	-13	NA	116989192	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987595_116987704_116987789_116987920_116988351_116988569_116988697_116988806_116989006_116989097
ES.24070.14	chr4	-	3233	9	NNC	ENSMUSG00000028680.15	novel	2512	14	NA	NA	4	-1	intron_retention	FALSE	canonical	2	6	junction_4	54.0485892507843	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAAGGCCTTATCAT	3223	False	NA	-1	True	AATAAA	-12	NA	116991156	116985854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987603_116987704_116987789_116987880_116988351_116988569_116988697_116988806_116989194_116989923_116990700_116990848
ES.24070.15	chr4	-	2215	13	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	47.0019946385257	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAAGGCCTTATCA	3161	False	NA	-2	True	AATAAA	-11	NA	116991218	116985855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116990384_116990503_116990591_116990700_116990848
ES.24070.16	chr4	-	3057	11	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	135	junction_7	17.3334935890028	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAAGGCCTTATCA	3219	False	NA	-2	True	AATAAA	-11	NA	116991160	116985855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987603_116987704_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990503_116990591_116990700_116990848
ES.24070.17	chr4	-	2417	15	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	43.7128851316247	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAAGGCCTTATCA	3149	False	NA	-2	True	AATAAA	-11	NA	116991230	116985855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990128_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.18	chr4	-	2522	14	FSM	ENSMUSG00000028680.15	ENSMUST00000126135.2	2512	14	-15	5	4	-3	multi-exon	FALSE	canonical	3	135	junction_9	17.6963206151338	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTTGAAGGCCTTATC	3223	False	NA	-3	True	AATAAA	-10	NA	116991156	116985856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116986376_116986482_116986597_116987156_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.19	chr4	-	2474	15	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.660459346774	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTTGAAGGCCTTATC	3220	False	NA	-3	True	AATAAA	-10	NA	116991159	116985856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987349_116987439_116987603_116987704_116987789_116987880_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.2	chr4	-	2917	11	NIC	ENSMUSG00000028680.15	novel	2161	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	135	junction_7	16.6556296788804	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3214	False	NA	0	True	AATAAA	-13	NA	116991165	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988351_116988569_116989194_116989923_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.20	chr4	-	2624	10	NIC	ENSMUSG00000028680.15	novel	2512	14	NA	NA	374	-3	intron_retention	FALSE	canonical	3	135	junction_8	18.0950849339104	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTTGAAGGCCTTATC	3757	False	NA	-3	True	AATAAA	-10	NA	116990622	116985856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987603_116987704_116987789_116987920_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101
ES.24070.3	chr4	-	2474	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	-98	2	-98	0	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3121	False	NA	0	True	AATAAA	-13	NA	116991258	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.4	chr4	-	2462	14	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	135	junction_10	16.6772353078918	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3223	False	NA	0	True	AATAAA	-13	NA	116991156	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.5	chr4	-	2620	13	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	135	junction_10	16.3018403869011	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3219	False	NA	0	True	AATAAA	-13	NA	116991160	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990503_116990591_116990700_116990848
ES.24070.6	chr4	-	2384	15	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	42.8455341420593	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3220	False	NA	0	True	AATAAA	-13	NA	116991159	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988560_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ES.24070.7	chr4	-	2531	14	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-66	0	intron_retention	FALSE	canonical	3	135	junction_10	17.6521282891354	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3153	False	NA	0	True	AATAAA	-13	NA	116991226	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990700_116990848
ES.24070.8	chr4	-	2318	14	NNC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	57.7679504108858	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAGGCCTTATCATT	3187	False	NA	0	True	AATAAA	-13	NA	116991192	116985853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987880_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990385_116990503_116990591_116990700_116990848
ES.24071.1	chr4	-	179	1	Intergenic	novelGene_19762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	8288	False	NA	NA	False	NA	NA	NA	116994732	116994553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_116994600_116994700
ES.24072.1	chr4	+	212	1	Intergenic	novelGene_19764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTAAAAATTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	117009196	117009408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117009200_117009400
ES.24073.1	chr4	-	1598	2	Intergenic	novelGene_19763	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGGGATTTAATATTC	NA	False	NA	NA	False	ATTAAA	-31	NA	117010324	117008506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117009180_117009399
ES.24074.1	chr4	-	858	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	121	-119	-38	119	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGATTGGTGTGGCAG	NA	False	NA	NA	False	AGTAAA	-31	NA	117013319	117010904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ES.24074.12	chr4	-	657	6	NNC	ENSMUSG00000047675.16	novel	860	6	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	5096.00091836726	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTGTCTAGGTGTT	NA	False	NA	-25	True	AATAAA	-18	NA	117013301	117011035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117011185_117011495_117011626_117011886_117012011_117012204_117012305_117012767_117012875_117013254
ES.24074.2	chr4	-	854	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	6	0	6	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	False	NA	-13	True	AATAAA	-30	NA	117013434	117011023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ES.24074.3	chr4	-	1373	4	NIC	ENSMUSG00000047675.16	novel	860	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	8358	junction_3	2439.93210288046	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	False	NA	-13	True	AATAAA	-30	NA	117013281	117011023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117011185_117011495_117012011_117012204_117012875_117013254
ES.24074.6	chr4	-	910	6	NNC	ENSMUSG00000047675.16	novel	860	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	450	junction_5	4943.31441039309	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	False	NA	-13	True	AATAAA	-30	NA	117013262	117011023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013026
ES.24074.7	chr4	-	946	5	NIC	ENSMUSG00000047675.16	novel	860	6	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	8358	junction_4	2115.77019073433	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCTAGGTGTTTGGA	NA	False	NA	-21	True	AATAAA	-22	NA	117013325	117011031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117011185_117011495_117012011_117012204_117012305_117012767_117012875_117013254
ES.24074.8	chr4	-	1203	4	FSM	ENSMUSG00000064542.3_ENSMUSG00000047675.16	ENSMUST00000144051.8	523	4	-5	-675	-2	-1	multi-exon	FALSE	canonical	3	8358	junction_3	2305.8312070825	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTCTAGGTGTTTGGA	NA	False	NA	-21	True	AATAAA	-22	NA	117013271	117011031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117012011_117012204_117012305_117012767_117012875_117013254
ES.24075.1	chr4	-	177	1	Intergenic	novelGene_19765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCGGATAC	NA	False	NA	NA	False	NA	NA	NA	117014537	117014360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117014400_117014500
ES.24076.1	chr4	+	179	1	Intergenic	novelGene_19766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGAAGCACATAAAT	NA	False	NA	NA	False	NA	NA	NA	117018073	117018252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117018100_117018300
ES.24077.1	chr4	-	3085	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	-238	-5	-238	5	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117040074	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.10	chr4	-	2958	21	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-24	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	142.160824420795	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039763	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117035597_117035782_117037768_117037864_117039627
ES.24077.11	chr4	-	2995	21	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-25	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	142.309337360554	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039764	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117035597_117035818_117037768_117037864_117039627
ES.24077.13	chr4	-	4522	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-20	5	intron_retention	FALSE	canonical	3	415	junction_13	30.7772440989322	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039759	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035444_117037768_117037864_117039627
ES.24077.14	chr4	-	4369	6	NIC	ENSMUSG00000028678.14	novel	2378	19	NA	NA	-3319	5	intron_retention	FALSE	canonical	3	451	junction_5	17.9599554565149	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117025926	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019868_117022338_117022450_117022554_117023652_117024077
ES.24077.15	chr4	-	2760	20	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.934945184403	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039759	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019212_117019308_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.18	chr4	-	3098	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-22	-25	intron_retention	FALSE	canonical	3	415	junction_13	23.5949088403281	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039761	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035444_117037768_117037864_117039627
ES.24077.19	chr4	-	2957	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-6	-25	intron_retention	FALSE	canonical	3	415	junction_13	23.451618175762	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039795	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.2	chr4	-	2924	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	10	5	intron_retention	FALSE	canonical	3	415	junction_13	30.3209681756884	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039826	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.20	chr4	-	2665	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	0	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	111.719003766007	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039789	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.21	chr4	-	2952	20	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-22	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.171166020633	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039761	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117018996_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.22	chr4	-	3750	9	NIC	ENSMUSG00000028678.14	novel	2378	19	NA	NA	-6346	-25	intron_retention	FALSE	canonical	0	0	junction_2	157.651861311562	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117028953	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019516_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024582_117027031_117027195_117027281
ES.24077.23	chr4	-	2825	6	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-22	-25	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	190.616473579804	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039761	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117020448_117036750_117037864_117039627
ES.24077.25	chr4	-	2461	5	NNC	ENSMUSG00000028678.14	novel	2378	19	NA	NA	-50	-25	intron_retention	TRUE	non_canonical	0	0	junction_3	208.280309919109	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117022657	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019312_117019409_117020434_117021939_117022450_117022554
ES.24077.28	chr4	-	4251	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-25	-25	intron_retention	FALSE	canonical	1	1	junction_17	111.715812844495	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039764	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117032206_117035117_117035167_117035341_117035786_117037768_117037864_117039627
ES.24077.29	chr4	-	2705	20	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-25	-25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	108.554414658402	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039764	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027155_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.3	chr4	-	3629	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-25	5	intron_retention	FALSE	canonical	3	415	junction_12	30.6018069439583	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039764	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.31	chr4	-	3215	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	0	-25	intron_retention	FALSE	canonical	1	1	junction_17	146.548647802835	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039789	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117035597_117035786_117037768_117037864_117039627
ES.24077.32	chr4	-	3054	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	0	-25	intron_retention	FALSE	canonical	3	415	junction_13	30.5060204541762	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039789	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.34	chr4	-	2706	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	16	-25	combination_of_known_splicesites	FALSE	canonical	1	5	junction_18	110.489050348501	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039820	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117039627
ES.24077.36	chr4	-	4000	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	10	-25	intron_retention	FALSE	canonical	3	415	junction_13	29.5331612337174	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	False	NA	63	True	AAGAAA	-41	NA	117039779	117016860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.4	chr4	-	3080	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-9	5	intron_retention	FALSE	canonical	3	415	junction_12	22.9179369470735	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039812	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.40	chr4	-	2335	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	9	498	9	6	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTAGCCTCTTCCCCTCCC	NA	False	NA	-1	True	AATAAA	-17	NA	117039827	117017333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.41	chr4	-	3496	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	11	5	intron_retention	FALSE	canonical	3	415	junction_14	30.0115718422818	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTAGCCTCTTCCCCTCC	NA	False	NA	-2	True	AATAAA	-16	NA	117039825	117017334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.42	chr4	-	2521	10	ISM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	72	8716	-25	-3678	5prime_fragment	FALSE	canonical	3	415	junction_4	21.6024689946929	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCAGCTTGACAGGCA	NA	False	NA	NA	False	NA	NA	NA	117039764	117025551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.5	chr4	-	2784	20	NNC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	108.769318021841	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039764	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117017580_117019206_117019321_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.6	chr4	-	2866	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	10	5	intron_retention	FALSE	canonical	3	415	junction_13	29.4237348553766	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039779	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24077.8	chr4	-	3938	19	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	-24	5	intron_retention	FALSE	canonical	3	415	junction_14	30.0115718422818	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	False	NA	93	True	AATAAA	-22	NA	117039763	117016830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ES.24078.1	chr4	-	202	2	Intergenic	novelGene_19767	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGAACCTAGGACCACC	NA	False	NA	NA	False	CATAAA	-22	NA	117058350	117057736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117057754_117058165
ES.24078.2	chr4	-	157	1	Intergenic	novelGene_19768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATAAATAAGGGC	NA	False	NA	NA	False	NA	NA	NA	117058160	117058003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117058000_117058200
ES.24078.3	chr4	-	176	1	Intergenic	novelGene_19769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	117058351	117058175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117058200_117058400
ES.24079.1	chr4	-	166	1	Intergenic	novelGene_19770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGGTAGTTGTTACAA	NA	False	NA	NA	False	NA	NA	NA	117098688	117098522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117098500_117098700
ES.2408.1	chr10	-	316	1	Intergenic	novelGene_1831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGGTAGATAAAGGAATAG	NA	False	NA	NA	False	NA	NA	NA	19393667	19393351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_19393400_19393700
ES.24080.1	chr4	-	245	1	Intergenic	novelGene_19771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	117106462	117106217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117106200_117106500
ES.24081.1	chr4	+	3508	1	Intergenic	novelGene_19772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTTTTTTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	117111274	117114782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117111300_117114800
ES.24082.1	chr4	+	746	2	FSM	ENSMUSG00000048772.16	ENSMUST00000145836.2	1298	2	550	2	550	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	2372	False	NA	NA	False	AATAAA	-18	NA	117123117	117125777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117123173_117125086
ES.24083.1	chr4	+	4608	3	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGCTTTTGTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	117237969	117254976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117238250_117248541_117252359_117254465
ES.24083.2	chr4	+	1334	3	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117237989	117250042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117238250_117243507_117244565_117250025
ES.24083.3	chr4	+	3074	6	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGTGCCTTTTCCACGA	NA	False	NA	NA	False	AATATA	-21	NA	117237989	117255298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117238250_117243507_117244565_117248541_117249108_117250025_117250238_117252012_117252159_117254465
ES.24083.4	chr4	+	6188	2	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTGTTTTCAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	117237992	117254442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117243045_117253306
ES.24083.5	chr4	+	1379	4	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACACATGCGTGCCTTTT	NA	False	NA	NA	False	AATATA	-15	NA	117238059	117255292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117238250_117250025_117250238_117252008_117252159_117254465
ES.24083.6	chr4	+	178	1	Intergenic	novelGene_19775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTATCAATTAGT	NA	False	NA	NA	False	NA	NA	NA	117245441	117245619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117245400_117245600
ES.24083.7	chr4	+	4508	4	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTACTTTTCTAGGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	117246263	117257387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117250238_117252012_117252159_117254465_117254573_117257106
ES.24084.1	chr4	+	2448	1	Intergenic	novelGene_19777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTTTAGGAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	117291217	117293665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117291200_117293700
ES.24084.2	chr4	+	1972	2	Antisense	novelGene_ENSMUSG00000028677.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117291218	117293628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117292814_117293251
ES.24085.1	chr4	+	4293	2	FSM	ENSMUSG00000087228.2	ENSMUST00000132690.2	660	2	186	-3819	186	3819	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCTATTAGTATACTGT	NA	False	NA	NA	False	CATAAA	-1	NA	117353834	117361618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117353926_117357416
ES.24086.1	chr4	-	1899	12	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-7	14978	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	409.41027937694	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGCAAGATCACCACAGA	9563	False	NA	NA	False	NA	NA	NA	117146650	117113681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117113691_117128656_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
ES.24086.10	chr4	-	5018	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	333.052029450336	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9562	False	NA	NA	False	ATTAAA	-14	NA	117146651	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117146266_117146399
ES.24086.11	chr4	-	6146	8	NIC	ENSMUSG00000028677.20	novel	1842	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	398.239288132455	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9571	False	NA	NA	False	ATTAAA	-14	NA	117146642	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
ES.24086.12	chr4	-	3063	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	-35	1	-35	0	multi-exon	FALSE	canonical	0	0	junction_5	470.113273367088	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354284	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ES.24086.13	chr4	-	3161	16	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	485.051401628964	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354242	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117133999_117134062_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ES.24086.14	chr4	-	6868	2	FSM	ENSMUSG00000028677.20	ENSMUST00000221157.2	720	2	-5050	-1098	-4667	0	multi-exon	FALSE	canonical	3	1071	junction_1	0	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117135647	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117130325_117130443
ES.24086.15	chr4	-	1754	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	399.456881277567	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9568	False	NA	NA	False	ATTAAA	-12	NA	117146645	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146602
ES.24086.17	chr4	-	1888	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	357.390878451032	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9559	False	NA	NA	False	ATTAAA	-12	NA	117146654	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
ES.24086.18	chr4	-	2062	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_5	362.522642970983	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9562	False	NA	NA	False	ATTAAA	-12	NA	117146651	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
ES.24086.2	chr4	-	2018	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	-59	-10	-59	1	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTGTGTTTGAAGAT	9511	False	NA	NA	False	ATTAAA	-16	NA	117146702	117128658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.21	chr4	-	2623	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	415.806926349237	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9562	False	NA	NA	False	ATTAAA	-12	NA	117146651	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145566_117146266_117146395
ES.24086.22	chr4	-	9230	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_5	331.18407100718	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9570	False	NA	NA	False	ATTAAA	-12	NA	117146643	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.25	chr4	-	2680	12	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	453.948753797585	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9576	False	NA	NA	False	ATTAAA	-12	NA	117146637	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117144135_117144278_117145559_117146266_117146395
ES.24086.26	chr4	-	1956	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	401.226232940968	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9562	False	NA	NA	False	ATTAAA	-12	NA	117146651	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146406
ES.24086.27	chr4	-	6705	8	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_2	404.637000335877	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	9557	False	NA	NA	False	ATTAAA	-12	NA	117146656	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
ES.24086.28	chr4	-	3070	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGTCTGTGTTTGA	NA	False	NA	NA	False	ATTAAA	-12	NA	117352182	117128662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117351846
ES.24086.29	chr4	-	2616	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	414.939332915066	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCTGTCTGTGTTTG	9575	False	NA	NA	False	ATTAAA	-11	NA	117146638	117128663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146395
ES.24086.31	chr4	-	6563	6	NIC	ENSMUSG00000028677.20	novel	1842	10	NA	NA	-5457	-4	intron_retention	FALSE	canonical	0	0	junction_4	415.469180565779	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCTGCTGTCTGTGTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	117136437	117128664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117134647_117134778_117134835_117134939_117135027_117135203
ES.24086.33	chr4	-	2266	14	NNC	ENSMUSG00000028677.20	novel	1675	14	NA	NA	2321	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	466.105531895842	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCTGCTGTCTGTGTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	117230333	117128664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117230057
ES.24086.35	chr4	-	2193	9	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	72	-4	intron_retention	FALSE	canonical	0	0	junction_5	338.016618489387	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCTGCTGTCTGTGTTT	9803	False	NA	NA	False	ATTAAA	-10	NA	117146410	117128664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117143170_117146222
ES.24086.37	chr4	-	2402	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-152	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	456.477162627004	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9418	False	NA	NA	False	ATTAAA	-8	NA	117146795	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145559_117146266_117146763
ES.24086.38	chr4	-	2849	16	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	1941	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	478.154768063879	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	117230713	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117172657_117172818_117173706_117173830_117230057
ES.24086.39	chr4	-	1965	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	317.079548378636	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9562	False	NA	NA	False	ATTAAA	-8	NA	117146651	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134933_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.4	chr4	-	3616	15	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	475.693328581706	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354246	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117128772_117128935_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ES.24086.40	chr4	-	2122	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_5	326.597422744286	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9576	False	NA	NA	False	ATTAAA	-8	NA	117146637	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.42	chr4	-	2669	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	401.007930096152	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9562	False	NA	NA	False	ATTAAA	-8	NA	117146651	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117145512_117146266_117146399
ES.24086.43	chr4	-	2020	12	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	438.916490861773	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9574	False	NA	NA	False	ATTAAA	-8	NA	117146639	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117144222_117144296_117146222_117146266_117146399
ES.24086.44	chr4	-	2632	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-4	2	intron_retention	FALSE	canonical	0	0	junction_4	329.633728647007	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9566	False	NA	NA	False	ATTAAA	-8	NA	117146647	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.45	chr4	-	1882	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.00410586252	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9574	False	NA	NA	False	ATTAAA	-8	NA	117146639	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146279_117146399
ES.24086.5	chr4	-	3115	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354258	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ES.24086.50	chr4	-	1884	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	355.187893937842	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9565	False	NA	NA	False	ATTAAA	-8	NA	117146648	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134933_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
ES.24086.51	chr4	-	1959	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	401.226232940968	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9576	False	NA	NA	False	ATTAAA	-8	NA	117146637	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146280_117146399
ES.24086.52	chr4	-	2407	9	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-56	2	intron_retention	FALSE	canonical	0	0	junction_4	378.602673491617	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9847	False	NA	NA	False	ATTAAA	-8	NA	117146366	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222
ES.24086.54	chr4	-	2122	12	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	448.170920022394	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9576	False	NA	NA	False	ATTAAA	-8	NA	117146637	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117144525_117144699_117146222_117146266_117146395
ES.24086.59	chr4	-	2104	10	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_5	318.755914977798	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9576	False	NA	NA	False	ATTAAA	-8	NA	117146637	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134914_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
ES.24086.6	chr4	-	5902	10	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_4	392.372020497303	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9566	False	NA	NA	False	ATTAAA	-14	NA	117146647	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
ES.24086.61	chr4	-	5890	10	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_7	438.575415478032	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	9576	False	NA	NA	False	ATTAAA	-8	NA	117146637	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117134647_117134778_117134835_117134933_117135027_117135203_117135301_117142575_117142707_117143125_117143170_117146222_117146266_117146395
ES.24086.63	chr4	-	3231	14	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	46	2	intron_retention	FALSE	canonical	0	0	junction_5	468.286628961265	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTGCTGTCTGTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	117354203	117128666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ES.24086.65	chr4	-	2081	12	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	445.97726288261	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTATAAACAAGCTG	9572	False	NA	NA	False	NA	NA	NA	117146641	117128676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117136056_117136195_117142575_117142709_117143047_117143170_117146222_117146266_117146395
ES.24086.66	chr4	-	1452	11	NNC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.00410586252	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGGTTGTATGATTTT	9566	False	NA	-3	True	TATAAA	-27	NA	117146647	117129115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146290_117146399
ES.24086.67	chr4	-	1336	10	ISM	ENSMUSG00000028677.20	ENSMUST00000128122.9	1330	11	676	-27	-41	0	3prime_fragment	FALSE	canonical	0	0	junction_5	318.755914977798	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCCCCTTTGGTTGT	9862	False	NA	-11	True	TATAAA	-19	NA	117146351	117129123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222
ES.24086.69	chr4	-	3034	8	ISM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	-11	3737	-11	1310	5prime_fragment	FALSE	canonical	0	0	junction_2	356.133201404836	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTATATATACTTT	9559	False	NA	NA	False	AATAAA	-13	NA	117146654	117132405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ES.24086.7	chr4	-	4190	6	ISM	ENSMUSG00000028677.20	ENSMUST00000102690.9	1842	10	8071	0	4773	0	intron_retention	FALSE	canonical	0	0	junction_5	400.480011985617	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117137898	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939
ES.24086.70	chr4	-	121	1	Genic_Genomic	ENSMUSG00000028677.20	novel	NA	NA	NA	NA	266	4	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTCCATCCCTCTTAAG	5822	False	NA	NA	False	ATTAAA	-18	NA	117142405	117142284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_117142300_117142400
ES.24086.71	chr4	-	162	1	Intergenic	novelGene_19773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAATAAATAA	5943	False	NA	NA	False	NA	NA	NA	117150270	117150108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117150100_117150300
ES.24086.72	chr4	-	268	1	Intergenic	novelGene_19774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCGGGGACTGGGGAA	6281	False	NA	NA	False	AATAAA	-16	NA	117172487	117172219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117172200_117172500
ES.24086.73	chr4	-	2723	1	Intergenic	novelGene_19776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTGTTCTTTCTGCCA	NA	False	NA	NA	False	AATACA	-31	NA	117260648	117257925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117257900_117260600
ES.24086.74	chr4	-	6173	1	Intergenic	novelGene_19778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	117323304	117317131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117317100_117323300
ES.24086.75	chr4	-	184	1	Intergenic	novelGene_19779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	117326248	117326064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117326100_117326200
ES.24086.76	chr4	-	306	1	Intergenic	novelGene_19780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAACTTTCTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	117329019	117328713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117328700_117329000
ES.24086.77	chr4	-	2429	2	ISM	ENSMUSG00000028677.20	ENSMUST00000138435.2	2630	3	-132	182243	-29	1934	5prime_fragment	FALSE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCCTTGTAAATCCAT	NA	False	NA	-2	True	AATAAA	-16	NA	117354278	117345497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117347528_117353879
ES.24086.78	chr4	-	2351	3	NNC	ENSMUSG00000028677.20	novel	458	2	NA	NA	9	1928	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTGCCTTGTAA	NA	False	NA	-8	True	AATAAA	-10	NA	117354240	117345503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117346335_117346368_117347528_117353879
ES.24086.79	chr4	-	3077	1	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	3628	1928	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTGCCTTGTAA	NA	False	NA	-8	True	AATAAA	-10	NA	117348580	117345503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117345500_117348600
ES.24086.8	chr4	-	5980	10	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_4	360.197476701631	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9566	False	NA	NA	False	ATTAAA	-14	NA	117146647	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146395
ES.24086.9	chr4	-	7982	5	NIC	ENSMUSG00000028677.20	novel	1842	10	NA	NA	4924	0	intron_retention	FALSE	canonical	3	917	junction_3	65.6405933854958	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117137747	117128660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117129573_117130249_117130325_117130443_117134647_117134778_117135027_117135203
ES.24087.1	chr4	+	1396	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-53	-2	at_least_one_novel_splicesite	TRUE	canonical	3	89	junction_2	270.430097252506	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCACCCTTGTGTCTAAG	NA	False	NA	23	True	AATAAA	-30	NA	117407508	117531492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.10	chr4	+	1024	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	242.081769931842	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTGTCTAAGGCTGT	NA	False	NA	28	True	AATAAA	-35	NA	117407537	117531497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.11	chr4	+	1362	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	290.937278463933	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117407540	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410144_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.12	chr4	+	1794	7	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	-15458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	330.512564898153	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGCTTTGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	117407541	117456980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410144_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117455847
ES.24087.13	chr4	+	1617	7	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	-23996	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	238.789074754735	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGTATGTGTGCA	NA	False	NA	NA	False	AAAAAG	-19	NA	117407541	117507482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503
ES.24087.14	chr4	+	851	5	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	322.704586270477	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407541	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117439796_117439914_117472365_117472439_117506503_117506604_117530937
ES.24087.15	chr4	+	1560	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-19	-13282	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	331.657160667793	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGTTAAATGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	117407542	117518196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117517161
ES.24087.16	chr4	+	3953	8	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-11	2	intron_retention	FALSE	canonical	3	348	junction_1	142.213550259991	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407550	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.17	chr4	+	1716	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	-11	14	-11	2	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407550	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.19	chr4	+	1709	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	238.585938395371	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407551	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.2	chr4	+	1395	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	225.311693826574	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCCTTGTGTCTAAGG	NA	False	NA	24	True	AATAAA	-31	NA	117407516	117531493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.20	chr4	+	1295	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-10	-6175	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	265.646116807681	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGTCAATGG	NA	False	NA	NA	False	NA	NA	NA	117407551	117525303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117525180
ES.24087.21	chr4	+	1908	10	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	278.506643757889	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407552	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.22	chr4	+	1606	8	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	303.494612129831	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407552	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117530937
ES.24087.23	chr4	+	1360	7	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	264.974212581778	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407552	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117407928_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.24	chr4	+	1638	8	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	251.195833840403	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407552	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117407928_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.25	chr4	+	4145	9	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	18	junction_3	287.653844707489	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407552	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117410241_117421817_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.26	chr4	+	1777	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	255.666011380082	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407553	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
ES.24087.27	chr4	+	1922	10	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	302.762466483399	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407554	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421122_117421333_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.28	chr4	+	4102	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-7	-8	intron_retention	FALSE	canonical	1	1	junction_7	303.942197424115	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117407554	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117502179_117502343_117506503_117506604_117530937
ES.24087.29	chr4	+	3841	7	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_6	317.595873538824	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407554	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117530937
ES.24087.3	chr4	+	1283	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-36	-6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	247.509142276006	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTCCTAGTGTGTCTG	NA	False	NA	3	True	AATAAA	-10	NA	117407525	117531472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.30	chr4	+	1728	10	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-5	43426	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	302.762466483399	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGTTTGAAAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	117407556	117574920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421815_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937_117531478_117574901
ES.24087.31	chr4	+	4695	7	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	1	-21063	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	290.004022960602	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGCTCTTCCAGAGG	NA	False	NA	NA	False	AATAAA	-36	NA	117407562	117510415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117407928_117410164_117410241_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503
ES.24087.32	chr4	+	3553	6	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	1	-8	intron_retention	FALSE	canonical	3	15	junction_5	358.281118676382	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117407562	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117410241_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117530937
ES.24087.33	chr4	+	4129	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_3	313.497507964577	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407562	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117410241_117421823_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.34	chr4	+	1433	7	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	334.224309242893	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTGTCTAAGGCTGT	NA	False	NA	28	True	AATAAA	-35	NA	117407562	117531497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
ES.24087.35	chr4	+	2013	8	ISM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	1	24039	1	-24023	5prime_fragment	FALSE	canonical	3	273	junction_1	193.741885939378	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAAGTCTCTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	117407562	117507455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503
ES.24087.36	chr4	+	2076	11	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	315.450851956371	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407562	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117466816_117467001_117472365_117472439_117506503_117506604_117530937
ES.24087.37	chr4	+	2178	8	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	9	-13282	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	324.764027363542	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGTTAAATGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	117407570	117518196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117517161
ES.24087.38	chr4	+	2186	10	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	318	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	299.376182695672	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407879	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117517994_117518796_117530937
ES.24087.39	chr4	+	1403	10	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	356	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	329.755128003257	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117410162	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117466816_117466872_117467186_117467204_117472365_117472439_117506503_117506604_117530937
ES.24087.4	chr4	+	1294	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	221.525785111774	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407528	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.40	chr4	+	1870	8	NIC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	356	-23999	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	299.429184841247	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTTGTGTGTATGTGT	NA	False	NA	NA	False	AAAAAG	-16	NA	117410162	117507479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117410241_117421817_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503
ES.24087.41	chr4	+	1648	7	ISM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	2601	24041	356	-24025	internal_fragment	FALSE	canonical	3	348	junction_1	153.607725500163	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAAAAGTCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	117410162	117507453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503
ES.24087.42	chr4	+	1119	7	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	356	-8	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	333.508329064741	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117410162	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117410241_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
ES.24087.43	chr4	+	5757	5	ISM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	11833	56342	-2560	2373	internal_fragment	FALSE	canonical	3	580	junction_1	90.2950026302674	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	117419394	117475152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365
ES.24087.44	chr4	+	3134	8	FSM	ENSMUSG00000033423.17	ENSMUST00000146384.8	1336	8	-1814	16	-1814	0	multi-exon	FALSE	canonical	3	18	junction_2	303.228680459255	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117420140	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.45	chr4	+	2666	7	ISM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	12853	14	-1540	2	3prime_fragment	FALSE	canonical	3	580	junction_1	77.4295378607759	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117420414	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.46	chr4	+	2634	1	Intergenic	novelGene_19781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	117422592	117425226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117422600_117425200
ES.24087.47	chr4	+	1051	6	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_5	280.899555001428	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117439794	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
ES.24087.48	chr4	+	1285	7	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-1274	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	348.508727772108	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117445000	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117445178_117446294_117446355_117450267_117450360_117466816_117467001_117472365_117472439_117506503_117506670_117530937
ES.24087.49	chr4	+	3998	3	ISM	ENSMUSG00000033423.17	ENSMUST00000146384.8	1336	8	47129	14	22809	2	3prime_fragment	FALSE	canonical	3	648	junction_2	37.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117469083	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117472439_117506503_117506604_117530937
ES.24087.5	chr4	+	1209	8	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	328.654772038492	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117407528	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117437859_117438055_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.50	chr4	+	3642	2	ISM	ENSMUSG00000033423.17	ENSMUST00000134379.2	1013	3	8971	-3	8971	3	3prime_fragment	FALSE	canonical	3	648	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTCTGGAGCCACCC	7064	False	NA	12	True	AATAAA	-19	NA	117503505	117531481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117506604_117530937
ES.24087.51	chr4	+	2859	2	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	21943	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGTGTCTGGAGCCA	NA	False	NA	9	True	AATAAA	-16	NA	117516477	117531478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117518796_117530937
ES.24087.52	chr4	+	172	1	Intergenic	novelGene_19783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATAAGTCAATG	NA	False	NA	NA	False	NA	NA	NA	117525130	117525302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117525100_117525300
ES.24087.53	chr4	+	3906	1	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	33040	2	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117527574	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117527600_117531500
ES.24087.6	chr4	+	1547	10	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	314.63822062258	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGTCCTAGTGTGTC	NA	False	NA	1	True	AATAAA	-8	NA	117407531	117531470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ES.24087.7	chr4	+	1266	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	296.27965278274	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGTCTGGAGCCACC	NA	False	NA	11	True	AATAAA	-18	NA	117407532	117531480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117530937
ES.24087.8	chr4	+	757	8	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-25	-6175	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	352.672247682908	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGTCAATGG	NA	False	NA	NA	False	NA	NA	NA	117407536	117525303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117518626_117518796_117525180
ES.24088.1	chr4	-	4718	1	Intergenic	novelGene_19782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTCTCAGGGTACAG	NA	False	NA	NA	False	NA	NA	NA	117517970	117513252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117513300_117518000
ES.24089.1	chr4	-	4740	1	Intergenic	novelGene_19784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTCTGCTTTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	117530160	117525420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117525400_117530200
ES.2409.1	chr10	-	170	1	Intergenic	novelGene_1832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAATTTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	19443346	19443176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_19443200_19443300
ES.24090.1	chr4	-	1558	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	8	0	6	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539462	117531877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ES.24090.10	chr4	-	2203	7	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	72	junction_6	59.4663770546012	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGATTGTTTCCTC	NA	False	NA	-41	True	AATAGA	-14	NA	117539434	117531883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117533001_117533146_117533333_117533546_117533965_117538039_117538563_117539029_117539191_117539410
ES.24090.11	chr4	-	1748	9	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	219	junction_4	17.7605602389114	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGATTGTTTCCTC	NA	False	NA	-41	True	AATAGA	-14	NA	117539192	117531883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538563_117539029
ES.24090.14	chr4	-	1895	9	NIC	ENSMUSG00000009640.12	novel	1771	10	NA	NA	15	-2	intron_retention	FALSE	canonical	3	72	junction_8	57.7200950709543	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGATTGTTTCCT	NA	False	NA	-42	True	AATAGA	-13	NA	117539435	117531884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
ES.24090.2	chr4	-	1574	11	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_10	51.6295458047037	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539467	117531877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
ES.24090.3	chr4	-	1774	10	NNC	ENSMUSG00000009640.12	novel	1771	10	NA	NA	14	0	intron_retention	FALSE	canonical	1	1	junction_2	83.1544747242544	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539436	117531877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117531992_117532217_117532531_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
ES.24090.5	chr4	-	1874	9	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	221	junction_4	16.7163841784041	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTTTCCTCACTTC	NA	False	NA	-36	True	AATAGA	-19	NA	117539402	117531878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029
ES.24090.7	chr4	-	1771	10	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	80	junction_9	52.0213631330651	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTTTCCTCACTTC	NA	False	NA	-36	True	AATAGA	-19	NA	117539462	117531878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ES.24090.9	chr4	-	5339	5	NIC	ENSMUSG00000009640.12	novel	1566	11	NA	NA	1312	0	intron_retention	FALSE	canonical	3	221	junction_3	22.410934831015	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGATTGTTTCCTCA	NA	False	NA	-40	True	AATAGA	-15	NA	117537868	117531882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117532514_117532623_117532697_117532928_117533333_117533546_117533715_117533805
ES.24091.1	chr4	-	214	1	Intergenic	novelGene_19785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAATAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	117563725	117563511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117563500_117563700
ES.24092.1	chr4	-	174	1	Intergenic	novelGene_19786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTGATCCTG	NA	False	NA	NA	False	NA	NA	NA	117625727	117625553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117625600_117625700
ES.24093.1	chr4	+	157	1	Intergenic	novelGene_19787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAATTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	117631116	117631273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117631100_117631300
ES.24094.1	chr4	-	3325	2	Intergenic	novelGene_19788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTAGCATCAGTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	117644316	117637709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117640971_117644252
ES.24095.1	chr4	-	308	1	Intergenic	novelGene_19789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAATGATTT	3118	False	NA	NA	False	NA	NA	NA	117679138	117678830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117678800_117679100
ES.24096.1	chr4	+	3221	14	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	28.5545258539791	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692175	117726502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692345_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.10	chr4	+	3804	12	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-127	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	31.6637812227522	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTGAGCTGCTGA	NA	False	NA	15	True	AATGAA	-9	NA	117692402	117726490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117722086_117722194_117722295_117722399_117722494_117724955_117725127_117725244
ES.24096.11	chr4	+	2802	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	160	517	-122	363	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCCTTGGGTCCAGTG	NA	False	NA	NA	False	TTTAAA	-29	NA	117692407	117725985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.12	chr4	+	3618	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-121	4	intron_retention	FALSE	canonical	1	3	junction_3	30.0613955098562	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692408	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713146_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.13	chr4	+	2928	13	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-117	366	intron_retention	FALSE	canonical	0	0	junction_6	29.2541545007808	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTGGGTCCAGTGTGT	NA	False	NA	NA	False	TTTAAA	-32	NA	117692412	117725988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720776_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.14	chr4	+	4198	11	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-112	2	intron_retention	FALSE	canonical	3	88	junction_9	9.03382532485547	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGCTGCTGATGTGC	NA	False	NA	20	True	AATGAA	-14	NA	117692417	117726495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.15	chr4	+	3419	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-111	0	intron_retention	FALSE	canonical	2	62	junction_6	14.1598022585063	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692418	117726502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.17	chr4	+	4771	8	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-108	4	intron_retention	FALSE	canonical	3	88	junction_6	9.70167248362837	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692421	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117722086_117722194_117722494_117724955_117725127_117725244
ES.24096.18	chr4	+	3797	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-102	-1	intron_retention	FALSE	canonical	2	62	junction_6	14.7860778833859	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692427	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.19	chr4	+	2804	10	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-99	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	33.4501656236096	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGATGTGCTTTG	NA	False	NA	24	True	AATGAA	-18	NA	117692430	117726499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714634_117721792_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.2	chr4	+	3403	15	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.3624500251401	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGATGTGCTTTGTCTG	NA	False	NA	28	True	AATGAA	-22	NA	117692175	117726503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692345_117692493_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.20	chr4	+	3416	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-93	-1	intron_retention	FALSE	canonical	3	85	junction_3	9.75071222469871	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692436	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.21	chr4	+	4046	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-82	-2	intron_retention	FALSE	canonical	2	62	junction_5	14.2984712816348	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTGATGTGCTTTGT	NA	False	NA	25	True	AATGAA	-19	NA	117692447	117726500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.22	chr4	+	3909	13	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-35	-3	intron_retention	FALSE	canonical	0	0	junction_5	29.5376407694017	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGATGTGCTTTG	NA	False	NA	24	True	AATGAA	-18	NA	117692494	117726499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117720781_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.23	chr4	+	4375	13	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	42.9389100932942	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692530	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117709241_117709353_117713071_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721301_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.24	chr4	+	3422	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	3	-1	intron_retention	FALSE	canonical	2	62	junction_6	14.759224598325	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692532	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955
ES.24096.26	chr4	+	4463	10	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	13	4	intron_retention	FALSE	canonical	3	88	junction_8	9.30949336251263	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692542	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117721021_117721109_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.27	chr4	+	3446	11	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-3	294	intron_retention	FALSE	canonical	3	88	junction_9	9.03382532485547	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCAGCCCTGTTTATTT	NA	False	NA	NA	False	GGGGCT	-26	NA	117692590	117725916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.28	chr4	+	3118	14	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.2091012808189	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692590	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721963_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.29	chr4	+	3778	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	4	0	intron_retention	FALSE	canonical	2	62	junction_5	14.0178457688762	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGAGCTGCTGATGT	NA	False	NA	18	True	AATGAA	-12	NA	117692597	117726493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.3	chr4	+	3196	13	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-16	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	43.1511394210319	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGATGTGCTTTG	NA	False	NA	24	True	AATGAA	-18	NA	117692175	117726499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692291_117700215_117700333_117713071_117713146_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722190_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.30	chr4	+	2590	17	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	15	125733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.5066269644196	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTCCTCCTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	117692608	117858128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720757_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244_117725853_117748681_117748728_117810986_117811042_117858105
ES.24096.31	chr4	+	3814	10	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-16	4	intron_retention	TRUE	canonical	0	0	junction_6	33.1543342044929	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692618	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117722086_117722198_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.32	chr4	+	3700	11	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-9	4	intron_retention	FALSE	canonical	3	85	junction_3	10.5280577506015	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117692625	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.33	chr4	+	4632	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	6106	3	intron_retention	FALSE	canonical	2	62	junction_5	14.3780135181211	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGCTGCTGATGTGCT	NA	False	NA	21	True	AATGAA	-15	NA	117698740	117726496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.34	chr4	+	3589	11	NIC	ENSMUSG00000028542.18	novel	2107	13	NA	NA	330	4	intron_retention	FALSE	canonical	2	62	junction_3	13.7116738584317	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117713070	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.35	chr4	+	3377	10	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	335	-3	intron_retention	FALSE	canonical	0	0	junction_5	32.3865541373097	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGATGTGCTTTG	NA	False	NA	24	True	AATGAA	-18	NA	117713075	117726499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117720971_117721109_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.36	chr4	+	2846	9	ISM	ENSMUSG00000028542.18	ENSMUST00000163288.2	2107	13	13583	-875	7409	4	3prime_fragment	FALSE	canonical	2	62	junction_1	13.6106575888162	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTGCTGATGTGCTT	NA	False	NA	22	True	AATGAA	-16	NA	117720149	117726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.37	chr4	+	173	1	Intergenic	novelGene_19791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	117815944	117816117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117815900_117816100
ES.24096.38	chr4	+	3166	1	Genic_Genomic	ENSMUSG00000086554.2	novel	NA	NA	NA	NA	15797	26	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGGGCTGCTAAGAT	NA	False	NA	NA	False	NA	NA	NA	117848029	117851195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_117848000_117851200
ES.24096.39	chr4	+	5791	2	Antisense	novelGene_ENSMUSG00000028538.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTCCTCCTGCAAAG	2929	False	NA	NA	False	NA	NA	NA	117852297	117858128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117856468_117856507
ES.24096.4	chr4	+	3174	14	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.2588933529053	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692205	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692329_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.40	chr4	+	4135	2	Antisense	novelGene_ENSMUSG00000028538.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCCAAAAAAAAAAAAAC	4559	False	NA	NA	False	NA	NA	NA	117853927	117858099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117856479_117856515
ES.24096.6	chr4	+	3586	12	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	130	-1	intron_retention	FALSE	canonical	3	85	junction_3	9.86101766662486	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	False	NA	26	True	AATGAA	-20	NA	117692377	117726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.7	chr4	+	3344	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	135	0	135	0	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692382	117726502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24096.8	chr4	+	3411	11	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-136	361	intron_retention	FALSE	canonical	2	62	junction_6	15.4483008774428	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAGCCTTGGGTCCAG	NA	False	NA	NA	False	TTTAAA	-27	NA	117692393	117725983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117722086_117722194_117722494_117724955_117725127_117725244
ES.24096.9	chr4	+	3249	14	NNC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.6194802362812	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692398	117726502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_117692675_117700215_117700333_117713071_117713150_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ES.24097.1	chr4	+	176	1	Intergenic	novelGene_19792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	117899198	117899374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117899200_117899400
ES.24098.1	chr4	+	1583	1	Intergenic	novelGene_19794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	117930695	117932278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117930700_117932300
ES.24098.2	chr4	+	179	1	Intergenic	novelGene_19795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	117931729	117931908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_117931700_117931900
ES.24099.1	chr4	-	174	1	Intergenic	novelGene_19790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	117700053	117699879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117699900_117700100
ES.241.1	chr1	-	168	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTTCTTCACACG	NA	False	NA	NA	False	NA	NA	NA	34586136	34585968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34586000_34586100
ES.2410.1	chr10	+	2117	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	-9	4	-9	-4	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCACTTGGATATTCA	NA	False	NA	13	True	AGTAAA	-14	NA	19467687	19485973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ES.2410.2	chr10	+	8073	6	NNC	ENSMUSG00000020009.14	novel	2112	7	NA	NA	32	0	intron_retention	FALSE	non_canonical	0	0	junction_2	11.5861986863682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	17	True	AGTAAA	-18	NA	19467737	19485977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19467946_19473163_19477298_19477354_19479681_19481981_19482169_19483004_19483130_19484884
ES.2410.3	chr10	+	5859	6	NIC	ENSMUSG00000020009.14	novel	2112	7	NA	NA	33	0	intron_retention	FALSE	canonical	3	26	junction_3	3.44093010681705	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	17	True	AGTAAA	-18	NA	19467738	19485977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_19467946_19473163_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ES.2410.4	chr10	+	2003	7	FSM	ENSMUSG00000020009.14	ENSMUST00000164591.3	1974	7	-33	4	-13	-4	multi-exon	FALSE	canonical	2	3	junction_2	10.3279555898864	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCACTTGGATATTCA	NA	False	NA	13	True	AGTAAA	-14	NA	19467787	19485973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_19467946_19473163_19473265_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ES.24100.1	chr4	-	5354	7	FSM	ENSMUSG00000078588.11	ENSMUST00000164853.8	3990	7	-1358	-6	-1030	6	multi-exon	FALSE	canonical	1	2	junction_3	2.14087209644419	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCCTGAATTCCTCA	NA	False	NA	NA	False	CATAAA	-21	NA	117730784	117723714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185
ES.24100.10	chr4	-	2484	8	NNC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.0313782397557	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740676	117730327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117731201_117733896_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.11	chr4	-	5166	7	NIC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	10	-1	intron_retention	FALSE	canonical	3	58	junction_1	9.15908777602272	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740663	117730328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.12	chr4	-	2299	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	12	1	1	-1	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740672	117730328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.13	chr4	-	2543	9	NNC	ENSMUSG00000028541.15	novel	2466	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	30.4340988859536	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740672	117730328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117731201_117731590_117731835_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.14	chr4	-	2232	7	ISM	ENSMUSG00000028541.15	ENSMUST00000084325.10	4093	13	-295	3872	26	-1	5prime_fragment	FALSE	canonical	2	4	junction_6	25.0044440494529	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740647	117730328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117740298
ES.24100.15	chr4	-	3567	7	ISM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	28	1	17	-1	intron_retention	FALSE	canonical	3	58	junction_2	8.87724932372385	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCCTTGTCTGTCTGTG	NA	False	NA	-10	True	AGTAAA	-16	NA	117740656	117730328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972
ES.24100.16	chr4	-	2294	8	NNC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	25.0411905565569	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCCCTTGTCTGTCTG	NA	False	NA	-12	True	AGTAAA	-14	NA	117740651	117730330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117731201_117734058_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.18	chr4	-	5892	6	NIC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	1	-397	intron_retention	FALSE	canonical	3	58	junction_1	9.54148835350125	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGCATTCACTTTGAG	NA	False	NA	NA	False	AATAGA	-16	NA	117740672	117730895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972
ES.24100.19	chr4	-	4589	7	NIC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	20	-397	intron_retention	FALSE	canonical	3	58	junction_1	9.15908777602272	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGCATTCACTTTGAG	NA	False	NA	NA	False	AATAGA	-16	NA	117740653	117730895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.2	chr4	-	5042	14	NIC	ENSMUSG00000028541.15	novel	4093	13	NA	NA	-13	562	intron_retention	FALSE	canonical	1	2	junction_3	33.2134926599802	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCCCCGGGGCCCTCAC	NA	False	NA	NA	False	AATAAA	-36	NA	117740697	117725894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.20	chr4	-	1745	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	-3	570	-3	-399	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCCAGCATTCACTTTG	NA	False	NA	NA	False	AATAGA	-14	NA	117740687	117730897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.3	chr4	-	7329	13	NIC	ENSMUSG00000028541.15	novel	4093	13	NA	NA	8	5	intron_retention	FALSE	canonical	1	2	junction_3	33.5818858248842	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCACACACTGGGCAG	NA	False	NA	NA	False	ATTAAA	-23	NA	117740665	117726451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.4	chr4	-	4455	14	NIC	ENSMUSG00000028541.15	novel	4093	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_3	33.2134926599802	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGTTCTGCACACACTG	NA	False	NA	NA	False	ATTAAA	-18	NA	117740672	117726456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.5	chr4	-	4167	14	NNC	ENSMUSG00000028541.15	novel	4093	13	NA	NA	14	-4	intron_retention	FALSE	canonical	0	0	junction_5	34.1186582420336	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTAGTTCTGCACAC	NA	False	NA	NA	False	ATTAAA	-14	NA	117740338	117726460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728441_117728943_117729058_117729185_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739011_117740298
ES.24100.6	chr4	-	1587	9	NNC	ENSMUSG00000078588.11	novel	1365	8	NA	NA	-10911	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.0308356041379	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTAGTTCTGCACAC	NA	False	NA	NA	False	ATTAAA	-14	NA	117740665	117726460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117727026_117727106_117727186_117727302_117727373_117727712_117727768_117728260_117728387_117728943_117729058_117729185_117729378_117738995_117739015_117740298
ES.24100.7	chr4	-	2414	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	20	-122	9	12	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGAGAAAGTTTTATCT	NA	False	NA	-6	True	AATAAA	-28	NA	117740664	117730205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.8	chr4	-	5286	7	NIC	ENSMUSG00000028541.15	novel	2466	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	58	junction_1	9.15908777602272	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCACTGTTACAGGGAG	NA	False	NA	-18	True	AATAAA	-16	NA	117740672	117730217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ES.24100.9	chr4	-	3713	7	ISM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	-8	-109	-8	-1	intron_retention	FALSE	canonical	3	58	junction_2	8.87724932372385	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCCACTGTTACAGGGA	NA	False	NA	-19	True	AATAAA	-15	NA	117740692	117730218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972
ES.24101.10	chr4	-	2171	4	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	2551	junction_2	44.5146667465405	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744516	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117743343_117743472_117743557_117743786
ES.24101.11	chr4	-	1882	5	ISM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	-1	-6	-1	-1	intron_retention	FALSE	canonical	3	2536	junction_3	94.6229359087954	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744518	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264
ES.24101.12	chr4	-	1728	6	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2536	junction_3	44.6739297577457	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744530	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472_117743557_117743786
ES.24101.13	chr4	-	1834	5	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	2551	junction_2	44.1439406940522	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744513	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117743343_117743472_117743557_117743786
ES.24101.15	chr4	-	2733	3	NIC	ENSMUSG00000033379.14	novel	872	6	NA	NA	6	1	intron_retention	FALSE	canonical	3	2536	junction_1	7.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGAGGCTTCTGTTGGC	NA	False	NA	-4	True	AATAAA	-18	NA	117744511	117741525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117742878_117743000_117743343_117743472
ES.24101.16	chr4	-	1862	5	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-6	1	intron_retention	FALSE	canonical	3	2536	junction_3	47.6471405228058	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGAGGCTTCTGTTGGC	NA	False	NA	-4	True	AATAAA	-18	NA	117744536	117741525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743557_117743786
ES.24101.17	chr4	-	1513	7	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_2	980.429398557364	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGAGGCTTCTGTTGGC	NA	False	NA	-4	True	AATAAA	-18	NA	117744513	117741525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117741839_117742300_117742486_117742821_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786
ES.24101.18	chr4	-	979	8	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	907.277065437779	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGAGGCTTCTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	117744492	117741527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743361_117743472_117743557_117743786_117743836_117744366
ES.24101.21	chr4	-	1305	6	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	5	-1	intron_retention	FALSE	canonical	3	2123	junction_5	189.455430114843	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGAGGCTTCTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	117744512	117741527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743557_117743786_117743836_117744366
ES.24101.22	chr4	-	1423	5	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	10	-1	intron_retention	FALSE	canonical	3	2123	junction_4	210.397688913163	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGAGGCTTCTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	117744507	117741527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117743557_117743786_117743836_117744366
ES.24101.23	chr4	-	2407	3	NIC	ENSMUSG00000033379.14	novel	779	4	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	2551	junction_1	54	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGAGGCTTCTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	117744498	117741527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117742492_117742825_117743557_117743786
ES.24101.24	chr4	-	1053	8	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1161.30233016248	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGAGGCTTCTGTT	NA	False	NA	-7	True	AATAAA	-15	NA	117744511	117741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743361_117743472_117743557_117743786_117743892_117744366
ES.24101.25	chr4	-	2358	3	Fusion	ENSMUSG00000028540.7_ENSMUSG00000033379.14	novel	935	7	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1296	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCAGTGAGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	117749194	117741529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_117741839_117742300_117744172_117749016
ES.24101.26	chr4	-	1220	7	NIC	ENSMUSG00000033379.14	novel	935	7	NA	NA	14	0	intron_retention	FALSE	canonical	3	113	junction_6	919.481556820654	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCAGTGAGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	117744503	117741529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472_117743557_117743786_117743892_117744366
ES.24101.27	chr4	-	1488	7	NNC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	10	-9	intron_retention	FALSE	non_canonical	0	0	junction_5	980.429398557364	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCCCAGTCAGTGA	NA	False	NA	-17	True	AATAAA	-5	NA	117744507	117741538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743331_117743468_117743557_117743786
ES.24101.28	chr4	-	2728	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	-10	13	intron_retention	TRUE	canonical	3	66	junction_1	6.32455532033676	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAGACTCAGTCAACA	NA	False	NA	NA	False	AATAAA	-26	NA	117749193	117745826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748625_117748906
ES.24101.29	chr4	-	2574	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	-21	2	-21	-2	multi-exon	FALSE	canonical	3	66	junction_1	6.70522184569608	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAACATTTGGGCCTAAACA	NA	False	NA	NA	False	AATAAA	-11	NA	117749250	117745841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ES.24101.3	chr4	-	1060	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	-61	1	-57	-1	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744587	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ES.24101.30	chr4	-	2330	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1	224	1	40	multi-exon	FALSE	canonical	3	66	junction_1	6.70522184569608	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGTGGATATGTG	NA	False	NA	33	True	ACTAAA	-17	NA	117749228	117746063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ES.24101.31	chr4	-	2766	3	NIC	ENSMUSG00000028540.7	novel	2558	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_1	8	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749229	117746103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117746874_117746951_117748625_117748906
ES.24101.32	chr4	-	2450	5	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	11	0	intron_retention	FALSE	canonical	2	6	junction_4	30.7926533445885	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749206	117746103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117746874_117746951_117747129_117747214_117748316_117748511_117748625_117748917
ES.24101.33	chr4	-	2192	6	NNC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.8181764548132	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTTCTCTTTATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	117749170	117746104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117746874_117746951_117747090_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ES.24101.34	chr4	-	2529	4	NIC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	78	junction_1	2.16024689946929	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTTCTCTTTATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	117749197	117746104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117747129_117747214_117748316_117748511_117748625_117748906
ES.24101.35	chr4	-	2841	2	FSM	ENSMUSG00000028540.7	ENSMUST00000126554.2	627	2	-45	-2169	1	-2	multi-exon	FALSE	canonical	3	82	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749228	117746105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117748625_117748906
ES.24101.36	chr4	-	2201	6	NNC	ENSMUSG00000028540.7	novel	2555	6	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.2892720282281	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTTTCTCTTTATTC	NA	False	NA	-9	True	AATAAA	-13	NA	117749193	117746105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748958
ES.24101.4	chr4	-	2198	3	FSM	ENSMUSG00000033379.14	ENSMUST00000152356.2	560	3	-1520	-118	0	-1	multi-exon	FALSE	canonical	3	2551	junction_2	20.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744517	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117741839_117742300_117742492_117742825
ES.24101.5	chr4	-	1968	4	NIC	ENSMUSG00000033379.14	novel	935	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2551	junction_2	44.5146667465405	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744517	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117743557_117743786
ES.24101.6	chr4	-	2298	3	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	2592	junction_1	33.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744513	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117743557_117743786
ES.24101.7	chr4	-	1054	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744525	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
ES.24101.8	chr4	-	1975	5	NIC	ENSMUSG00000033379.14	novel	935	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	2536	junction_3	20.8386659841747	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744547	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472
ES.24101.9	chr4	-	3020	1	Genic_Genomic	ENSMUSG00000033379.14	novel	NA	NA	NA	NA	-13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	587	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGCTTCTGTTGGCCC	NA	False	NA	-2	True	AATAAA	-20	NA	117744543	117741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_117741500_117744500
ES.24102.1	chr4	-	4861	1	Genic_Genomic	ENSMUSG00000033365.15	novel	NA	NA	NA	NA	-2143	1311	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGTAGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	117755232	117750371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_117750400_117755200
ES.24102.10	chr4	-	5292	19	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	0	-6	intron_retention	FALSE	canonical	1	2	junction_13	19.1199107648106	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTCTGCCTCCTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	117772196	117751688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761102_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
ES.24102.13	chr4	-	5435	19	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	-12	-7	intron_retention	FALSE	canonical	0	0	junction_7	19.423798563033	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTCTGCCTCCTT	NA	False	NA	-7	True	AGTAAA	-12	NA	117772208	117751689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117758000_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
ES.24102.14	chr4	-	3445	19	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	2	-7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_17	19.7218309820349	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTCTGCCTCCTT	NA	False	NA	-7	True	AGTAAA	-12	NA	117772194	117751689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117768969_117769707_117771484
ES.24102.15	chr4	-	3597	20	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	-30	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	19.5670592091449	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTCTGCCTCCTT	NA	False	NA	-7	True	AGTAAA	-12	NA	117772226	117751689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762248_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.16	chr4	-	4497	4	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	15520	7	1183	-7	intron_retention	FALSE	canonical	3	69	junction_1	6.48074069840786	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTCTGCCTCCTT	8884	False	NA	-7	True	AGTAAA	-12	NA	117756676	117751689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616
ES.24102.17	chr4	-	3656	20	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.5211370632903	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTCTGCCTCCTT	NA	False	NA	-7	True	AGTAAA	-12	NA	117772207	117751689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117758000_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.18	chr4	-	3518	20	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	-11	-8	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	17.6376266140367	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGCCTCTGCCTCCT	NA	False	NA	-8	True	AGTAAA	-11	NA	117772207	117751690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117751855_117751940_117752043_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.2	chr4	-	4809	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	4	-1218	4	1218	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCTGAGTTTATATC	NA	False	NA	NA	False	ATTAAA	-17	NA	117772192	117750464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.3	chr4	-	4252	16	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	8	1	intron_retention	FALSE	canonical	3	46	junction_15	12.1899776683781	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTCCTTTCTCTGTC	NA	False	NA	1	True	AGTAAA	-20	NA	117772188	117751681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.4	chr4	-	3821	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	-226	0	-226	0	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCCTTTCTCTGT	NA	False	NA	0	True	AGTAAA	-19	NA	117772422	117751682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24102.5	chr4	-	5368	19	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	4	1	4	-1	intron_retention	FALSE	canonical	3	50	junction_14	10.6920993099728	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTCCTTTCTCTG	NA	False	NA	-1	True	AGTAAA	-18	NA	117772192	117751683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969
ES.24102.7	chr4	-	4610	4	NIC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	1277	-2	intron_retention	FALSE	canonical	3	69	junction_1	7.07106781186548	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGCCTCCTTTCTCT	8978	False	NA	-2	True	AGTAAA	-17	NA	117756582	117751684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117751855_117751940_117752499_117752616_117752676_117752759
ES.24102.8	chr4	-	3484	20	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	18.9853420642452	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGCCTCCTTTCTCT	NA	False	NA	-2	True	AGTAAA	-17	NA	117772174	117751684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769620_117771484
ES.24102.9	chr4	-	3527	20	NNC	ENSMUSG00000033365.15	novel	3595	20	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	19.2130495819437	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTCTGCCTCCTTTC	NA	False	NA	-5	True	AGTAAA	-14	NA	117772208	117751687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761102_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ES.24103.1	chr4	-	1829	5	NIC	ENSMUSG00000028539.15	novel	1568	6	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTCAGATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	117786695	117783357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117784266_117784357_117784497_117784820_117785340_117786215_117786366_117786582
ES.24103.2	chr4	-	2033	4	NIC	ENSMUSG00000028539.15	novel	2177	5	NA	NA	-29	1	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTCAGATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	117786723	117783357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117784497_117784820_117785340_117786215_117786450_117786582
ES.24104.1	chr4	-	1911	8	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	3746	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	28.784916685157	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTGTTTTCTCTGAC	3794	False	NA	1	True	AATAAA	-20	NA	117821899	117789348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117821709
ES.24104.10	chr4	-	2638	12	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1006575804725	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGTTGTTTTCTCT	1851	False	NA	-2	True	AATAAA	-17	NA	117992122	117789351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117796602_117796706_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
ES.24104.11	chr4	-	2646	13	NNC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	33.6819272343823	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1873	False	NA	-5	True	AATAAA	-14	NA	117992100	117789354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117798935_117799002_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
ES.24104.12	chr4	-	2331	10	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.8817258699156	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1849	False	NA	-7	True	AATAAA	-12	NA	117992124	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
ES.24104.13	chr4	-	2216	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	7	2	7	0	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1869	False	NA	-7	True	AATAAA	-12	NA	117992104	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
ES.24104.14	chr4	-	2614	12	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.3545438866066	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1851	False	NA	-7	True	AATAAA	-12	NA	117992122	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
ES.24104.15	chr4	-	3762	3	ISM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	191891	0	25457	0	3prime_fragment	FALSE	canonical	3	79	junction_2	5.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	NA	False	NA	-7	True	AATAAA	-12	NA	117800188	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117790334_117797206_117797354_117797550
ES.24104.16	chr4	-	2578	12	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.6187457972192	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1838	False	NA	-7	True	AATAAA	-12	NA	117992135	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991599
ES.24104.17	chr4	-	1969	11	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	3690	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.4645410463621	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	3738	False	NA	-7	True	AATAAA	-12	NA	117821955	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117789849_117789994_117790334_117797206_117797354_117797550_117797698_117798929_117799002_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117821709
ES.24104.18	chr4	-	2798	14	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.2747216455933	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1847	False	NA	-7	True	AATAAA	-12	NA	117992126	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117890703_117890850_117911846_117911895_117964745_117964891_117991600
ES.24104.19	chr4	-	2619	13	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	26.6691405102518	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1880	False	NA	-7	True	AATAAA	-12	NA	117992093	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
ES.24104.2	chr4	-	2502	11	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	21.0437639218843	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTGTTTTCTCTGAC	1887	False	NA	1	True	AATAAA	-20	NA	117992086	117789348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
ES.24104.20	chr4	-	2617	12	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	29.2667978184402	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1834	False	NA	-7	True	AATAAA	-12	NA	117992139	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991600
ES.24104.21	chr4	-	2729	14	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	31.0715913171863	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1850	False	NA	-7	True	AATAAA	-12	NA	117992123	117789356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117953439_117953506_117964745_117964891_117991586
ES.24104.23	chr4	-	2798	14	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.596382086352	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGCCTCCTGTTGT	1859	False	NA	-9	True	AATAAA	-10	NA	117992114	117789358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117890703_117890850_117911846_117911895_117964745_117964891_117991586
ES.24104.25	chr4	-	1472	7	ISM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	170108	591	3674	-591	3prime_fragment	FALSE	canonical	3	57	junction_3	12.0473602456675	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTGGTGTATTATCAT	3722	False	NA	NA	False	NA	NA	NA	117821971	117789947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526
ES.24104.26	chr4	-	169	1	Intergenic	novelGene_19793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTTTCTTTCTTC	8485	False	NA	NA	False	NA	NA	NA	117918280	117918111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117918100_117918300
ES.24104.27	chr4	-	175	1	Intergenic	novelGene_19796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAAAACAAAA	984	False	NA	NA	False	NA	NA	NA	117952595	117952420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_117952400_117952600
ES.24104.28	chr4	-	1930	1	NIC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	1	-192514	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGTTCAAGGTCATCT	1887	False	NA	NA	False	AATAAA	-30	NA	117992086	117990156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117990200_117992100
ES.24104.3	chr4	-	1921	8	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	3678	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	28.4626500695138	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTGTTTTCTCTGAC	3726	False	NA	1	True	AATAAA	-20	NA	117821967	117789348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117789849_117789994_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526
ES.24104.5	chr4	-	2111	10	NIC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	28.7380678405817	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1890	False	NA	0	True	AATAAA	-19	NA	117992083	117789349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117964745_117964891_117991930
ES.24104.6	chr4	-	2460	10	NNC	ENSMUSG00000028538.13	novel	2143	11	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.8049611783375	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1871	False	NA	0	True	AATAAA	-19	NA	117992102	117789349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117964745_117964891_117991600
ES.24104.7	chr4	-	2592	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	-42	-1	-18	1	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1844	False	NA	0	True	AATAAA	-19	NA	117992129	117789349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
ES.24104.8	chr4	-	2218	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	-68	-7	-36	1	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTTGTTTTCTCTGA	1826	False	NA	0	True	AATAAA	-19	NA	117992147	117789349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
ES.24104.9	chr4	-	2686	13	NNC	ENSMUSG00000028538.13	novel	2549	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.2061206086154	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1895	False	NA	-1	True	AATAAA	-18	NA	117992078	117789350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117890703_117890850_117911846_117911895_117964745_117964891_117991586
ES.24105.1	chr4	+	3449	4	Antisense	novelGene_ENSMUSG00000033326.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTGTCATAGCATCT	9335	False	NA	NA	False	AATACA	-19	NA	117992308	118000081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_117994187_117995252_117996070_117996155_117996316_117999487
ES.24106.1	chr4	+	5417	3	Antisense	novelGene_ENSMUSG00000033326.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	5635	False	NA	NA	False	NA	NA	NA	118004266	118015488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_118004404_118005885_118006064_118010386
ES.24106.2	chr4	+	2746	11	Intergenic	novelGene_19797	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTGGGAGGGGAGG	5637	False	NA	NA	False	NA	NA	NA	118004268	118028125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118004404_118005885_118006064_118010386_118010506_118017328_118017697_118018846_118019052_118019591_118019843_118021578_118021709_118022038_118022150_118023583_118023628_118025577_118025776_118027118
ES.24106.3	chr4	+	4069	10	Intergenic	novelGene_19798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTGGGAGGGGAGG	5796	False	NA	NA	False	NA	NA	NA	118004427	118028125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118006064_118010386_118010506_118017328_118017697_118018846_118019052_118019591_118019843_118021578_118021709_118022038_118022150_118023583_118023628_118025577_118025776_118027118
ES.24106.4	chr4	+	4787	1	Antisense	novelGene_ENSMUSG00000033326.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTGGGAGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	118023338	118028125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_118023300_118028100
ES.24106.5	chr4	+	182	1	Intergenic	novelGene_19799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118025320	118025502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118025300_118025500
ES.24107.1	chr4	+	1453	1	Antisense	novelGene_ENSMUSG00000033326.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCGAGGAAACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	118033634	118035087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_118033600_118035100
ES.24108.1	chr4	-	4681	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	-16	-2	-16	2	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGTGGTCTGCCCCAT	NA	False	NA	1	True	AATAAA	-18	NA	118037256	117994151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
ES.24108.10	chr4	-	4871	21	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	-21	4	intron_retention	FALSE	canonical	3	25	junction_20	15.0079978678037	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGCATTACCTTGTCCT	NA	False	NA	-6	True	TATAAA	-18	NA	118036872	117994198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
ES.24108.11	chr4	-	5084	22	NIC	ENSMUSG00000033326.16	novel	4663	22	NA	NA	24	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	19.7275087929166	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGCATTACCTTGTCCT	NA	False	NA	-6	True	TATAAA	-18	NA	118037216	117994198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006554_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
ES.24108.14	chr4	-	4573	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106403.8	4536	22	-39	2	26	-2	multi-exon	FALSE	canonical	1	1	junction_21	18.9977919709961	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCGGTGCATTACCT	NA	False	NA	-12	True	TATAAA	-12	NA	118037214	117994204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034761_118037089
ES.24108.2	chr4	-	6730	22	NNC	ENSMUSG00000033326.16	novel	4663	22	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_18	24.8869553022801	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGACTGTGGTCTGCCCC	NA	False	NA	-1	True	AATAAA	-16	NA	118037184	117994153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118025776_118027118_118027234_118029507_118029681_118032750_118032927_118034591_118034774_118037089
ES.24108.3	chr4	-	6425	20	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	25	junction_19	15.0783732783156	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGACTGTGGTCTGCCC	NA	False	NA	-2	True	AATAAA	-15	NA	118036868	117994154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
ES.24108.5	chr4	-	4594	22	NIC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_21	14.8531740730846	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGACTGTGGTCTGCCC	NA	False	NA	-2	True	AATAAA	-15	NA	118036881	117994154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
ES.24108.6	chr4	-	4807	22	NNC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	18.6340823477656	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGACTGTGGTCTGCC	NA	False	NA	-3	True	AATAAA	-14	NA	118036838	117994155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036541
ES.24108.9	chr4	-	5049	23	NNC	ENSMUSG00000033326.16	novel	4550	22	NA	NA	21	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.0078359319434	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGCATTACCTTGTCCT	NA	False	NA	-6	True	TATAAA	-18	NA	118036830	117994198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118004565_118004626_118005881_118006554_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118036798
ES.24109.1	chr4	-	172	1	Intergenic	novelGene_19800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118054869	118054697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118054700_118054900
ES.2411.1	chr10	-	198	1	Antisense	novelGene_ENSMUSG00000020009.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAGAGACTAGAGAGAAA	NA	False	NA	NA	False	AATAAA	-10	NA	19473702	19473504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_19473500_19473700
ES.24110.1	chr4	+	177	1	Intergenic	novelGene_19801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATCATGACCC	NA	False	NA	NA	False	NA	NA	NA	118057567	118057744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118057600_118057700
ES.24111.1	chr4	+	1235	1	Intergenic	novelGene_19802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118062751	118063986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118062800_118064000
ES.24112.1	chr4	+	5584	30	Antisense	novelGene_ENSMUSG00000033295.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTCTGCCGCCGCCGCC	NA	False	NA	NA	False	NA	NA	NA	118068239	118148537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_118068326_118068554_118068687_118068902_118069078_118069162_118069447_118069523_118069679_118069916_118070036_118070653_118070827_118070934_118071062_118074288_118074384_118077686_118077805_118080421_118080578_118080914_118081133_118081691_118081792_118081876_118082129_118082225_118082326_118082998_118083575_118083650_118083768_118087890_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095208_118106097_118106209_118114687_118114875_118126372_118126517_118126677_118126821_118134544_118134684_118141970_118142049_118148375
ES.24113.1	chr4	-	6306	1	Genic_Genomic	ENSMUSG00000033295.15	novel	NA	NA	NA	NA	1065	4842	mono-exon	FALSE	NA	NA	NA	NA	NA	666	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGTTTT	9924	False	NA	NA	False	AATAAA	-18	NA	118066873	118060567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_118060600_118066900
ES.24113.11	chr4	-	7441	32	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	90.4450437078867	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTCTGTCTCAGCTCCT	NA	False	NA	-3	True	AATAAA	-29	NA	118148577	118065410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.12	chr4	-	7652	34	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	110.857091635313	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTCTGTCTCAGCTCCT	NA	False	NA	-3	True	AATAAA	-29	NA	118148572	118065410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085043_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.14	chr4	-	11481	32	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	30	-1	intron_retention	TRUE	non_canonical	0	0	junction_12	90.038331529638	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTCTGTCTCAGCTCCT	NA	False	NA	-3	True	AATAAA	-29	NA	118148572	118065410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118077316_118077359_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.16	chr4	-	8111	26	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	51910	2	-3050	-2	3prime_fragment	FALSE	canonical	3	357	junction_20	54.0711531225292	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCCTCTGTCTCAGCTCC	NA	False	NA	-4	True	AATAAA	-28	NA	118096692	118065411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935
ES.24113.2	chr4	-	7993	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	31	-368	31	368	multi-exon	TRUE	canonical	3	357	junction_20	50.8611774834205	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGGGTATTGGACGC	NA	False	NA	NA	False	AGTAAA	-18	NA	118148571	118065041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.20	chr4	-	7674	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	89.192115113599	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCTCTGTCTCAGCTC	NA	False	NA	-5	True	AATAAA	-27	NA	118148627	118065412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126506_118126670_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.21	chr4	-	7324	32	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	135.180505216672	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCCTCTGTCTCAGCTC	NA	False	NA	-5	True	AATAAA	-27	NA	118148574	118065412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080418_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126674_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.24	chr4	-	5554	19	NIC	ENSMUSG00000033295.15	novel	4808	25	NA	NA	4525	-4	intron_retention	FALSE	canonical	3	364	junction_15	48.431477622424	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	8002	False	NA	-6	True	AATAAA	-26	NA	118083772	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650
ES.24113.26	chr4	-	5117	21	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	108.689224396901	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	-6	True	AATAAA	-26	NA	118148557	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083561_118141969_118142050_118148376
ES.24113.29	chr4	-	5514	23	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	2033	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	135.763383432322	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	594	False	NA	-6	True	AATAAA	-26	NA	118091180	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074384_118077686_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118091154
ES.24113.30	chr4	-	7649	34	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	36	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	110.674192382435	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	-6	True	AATAAA	-26	NA	118148566	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118075208_118075242_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.31	chr4	-	8216	32	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	33	-4	intron_retention	FALSE	canonical	3	357	junction_20	51.3202590663254	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	-6	True	AATAAA	-26	NA	118148569	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.32	chr4	-	7112	29	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	36	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	95.0442431884504	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	NA	False	NA	-6	True	AATAAA	-26	NA	118148566	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118148376
ES.24113.33	chr4	-	4500	16	NIC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	-350	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	123.769570843025	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCCTCTGTCTCAGCT	3127	False	NA	-6	True	AATAAA	-26	NA	118088647	118065413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118083650_118083769_118087891
ES.24113.34	chr4	-	7600	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.0434409431711	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148557	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070022_118070644_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.35	chr4	-	6051	25	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-163	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.80911646615	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118093376	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067717_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109
ES.24113.38	chr4	-	7558	32	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	13	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_31	90.3180644032202	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148589	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118148376
ES.24113.39	chr4	-	5629	23	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	910	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	105.159471579168	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118092303	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083569_118083650_118083769_118087891_118088086_118088682_118088989_118092155
ES.24113.4	chr4	-	7662	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	-5	-1	-5	1	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCTCAGCTCCTGT	NA	False	NA	-1	True	AATAAA	-31	NA	118148607	118065408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.40	chr4	-	7612	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	36	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	113.819068145182	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148566	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074295_118074387_118077689_118077806_118080418_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.42	chr4	-	6630	27	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	97.9846926820715	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148499	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095142_118148426
ES.24113.43	chr4	-	7563	34	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.8620882774466	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148574	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118065924_118065983_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.45	chr4	-	5673	10	NIC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	-1537	-5	intron_retention	FALSE	canonical	3	420	junction_5	39.3587488509367	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	383	False	NA	-7	True	AATAAA	-25	NA	118076414	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118069076_118069160_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288
ES.24113.46	chr4	-	8392	16	NNC	ENSMUSG00000033295.15	novel	4808	25	NA	NA	5137	-5	intron_retention	TRUE	non_canonical	0	0	junction_10	117.099843438552	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	8614	False	NA	-7	True	AATAAA	-25	NA	118083160	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118077316_118077357_118077806_118080422_118080578_118080914_118081134_118081695_118082129_118082225_118082324_118082995
ES.24113.47	chr4	-	7619	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	89.1257396094837	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTAGGCCTCTGTCTCAGC	NA	False	NA	-7	True	AATAAA	-25	NA	118148572	118065414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106196_118114676_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.49	chr4	-	6532	27	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	21767	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	98.1536954423728	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	8211	False	NA	-8	True	AATAAA	-24	NA	118126704	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081081_118083055_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675
ES.24113.5	chr4	-	3222	12	NNC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	-2842	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	181.158895598713	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCTCAGCTCCTGT	NA	False	NA	-1	True	AATAAA	-31	NA	118077719	118065408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067040_118067798_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074384_118077686
ES.24113.50	chr4	-	5856	22	NNC	ENSMUSG00000033295.15	novel	4808	25	NA	NA	2053	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	162.286021685378	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	5530	False	NA	-8	True	AATAAA	-24	NA	118086244	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069443_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085225_118085579
ES.24113.51	chr4	-	7054	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	88.9982388782919	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118148568	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092794_118093582_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.53	chr4	-	4514	18	NNC	ENSMUSG00000033295.15	novel	4808	25	NA	NA	5164	-6	intron_retention	FALSE	canonical	0	0	junction_17	116.736535348284	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	8641	False	NA	-8	True	AATAAA	-24	NA	118083133	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118082129_118082225_118082324_118082993
ES.24113.54	chr4	-	6907	28	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-12934	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	96.6725980867923	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118106576	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118106400
ES.24113.55	chr4	-	6831	28	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-13199	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	96.6725980867923	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118106841	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118106741
ES.24113.56	chr4	-	7642	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	88.9969221290124	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118148570	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082153_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.60	chr4	-	4333	20	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	57	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	110.641343652397	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118148545	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081027_118126448_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.61	chr4	-	6534	25	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-1401	-6	intron_retention	FALSE	canonical	3	357	junction_19	55.1248582764618	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGGCCTCTGTCTCAG	NA	False	NA	-8	True	AATAAA	-24	NA	118095043	118065415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935
ES.24113.62	chr4	-	7689	34	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	131.130998787378	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	False	NA	-10	True	AATAAA	-22	NA	118148562	118065417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082993_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118145303_118145383_118148376
ES.24113.63	chr4	-	7532	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	44	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	88.7832189151616	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	False	NA	-10	True	AATAAA	-22	NA	118148558	118065417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106167_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.64	chr4	-	7004	29	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-27071	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.0442431884504	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	False	NA	-10	True	AATAAA	-22	NA	118120713	118065417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118120627
ES.24113.66	chr4	-	7371	32	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	46	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	115.262095575166	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	False	NA	-10	True	AATAAA	-22	NA	118148556	118065417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074384_118077686_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106165_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.67	chr4	-	7610	33	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	113.291585735382	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	False	NA	-10	True	AATAAA	-22	NA	118148576	118065417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074384_118077686_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082237_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.68	chr4	-	4104	13	NIC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	-5704	-9	intron_retention	FALSE	canonical	3	396	junction_12	40.4957988218806	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACACTAGGCCTCTGTCT	NA	False	NA	-11	True	AATAAA	-21	NA	118080581	118065418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422
ES.24113.69	chr4	-	7381	32	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	49	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.299599149926	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACACACTAGGCCTCTGT	NA	False	NA	-13	True	AATAAA	-19	NA	118148553	118065420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067088_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070043_118070983_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.70	chr4	-	7311	31	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	43	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	117.170625822155	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACACACTAGGCCTC	NA	False	NA	-16	True	AATAAA	-16	NA	118148559	118065423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074384_118077686_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118134545_118134682_118141969_118142050_118148376
ES.24113.71	chr4	-	4142	17	NNC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	6199	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.849107605147	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTTACACACTAGGCC	9676	False	NA	-18	True	AATAAA	-14	NA	118082098	118065425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067960_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874
ES.24113.73	chr4	-	3677	15	NNC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	17	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	126.984110367062	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTCTTACACACTAGGC	NA	False	NA	-19	True	AATAAA	-13	NA	118148585	118065426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080561_118148504
ES.24113.74	chr4	-	7451	34	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	25	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	87.8620882774467	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTCTTACACACTAGG	NA	False	NA	-20	True	AATAAA	-12	NA	118148577	118065427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083098_118083259_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.75	chr4	-	5400	21	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	8	-20	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	151.791600558134	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATTTCTTACACACTA	NA	False	NA	-22	True	AATAAA	-10	NA	118148463	118065429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067899_118082048_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118139303_118139426_118141969_118142050_118148376
ES.24113.76	chr4	-	7502	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	26	128	26	-128	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGCTAGTGCTGTAGA	NA	False	NA	NA	False	NA	NA	NA	118148576	118065537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.77	chr4	-	6986	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	9	661	9	115	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGAGTCTCGCTATCAT	NA	False	NA	NA	False	GGGGCT	-11	NA	118148593	118066070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.8	chr4	-	7052	32	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	90.5950498609787	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGTCTCAGCTCCTG	NA	False	NA	-2	True	AATAAA	-30	NA	118148577	118065409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.80	chr4	-	4802	23	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	2038	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	104.669846945069	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTCGAAGTGGGAGGC	599	False	NA	NA	False	AATAAA	-23	NA	118091175	118066120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118091154
ES.24113.87	chr4	-	7662	15	NIC	ENSMUSG00000033295.15	novel	4690	25	NA	NA	6021	56	intron_retention	FALSE	canonical	3	364	junction_13	54.1445533092778	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTACTTCAGATTCGAA	9498	False	NA	NA	False	AATAAA	-14	NA	118082276	118066129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118069076_118069160_118069447_118069523_118069679_118069916_118070830_118070937_118071062_118074288_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225
ES.24113.9	chr4	-	7670	31	NNC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_15	117.244928817128	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGTCTCAGCTCCTG	NA	False	NA	-2	True	AATAAA	-30	NA	118148576	118065409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081872_118082129_118082225_118082324_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.90	chr4	-	6826	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	34	796	34	1	multi-exon	FALSE	canonical	3	357	junction_20	50.8611774834205	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118148568	118066205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.91	chr4	-	6143	29	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	-21218	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	120.063094594773	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAATCAAAAAA	2845	False	NA	NA	False	NA	NA	NA	118114860	118066205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085043_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685
ES.24113.92	chr4	-	2166	11	ISM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	-18	26762	-18	1398	5prime_fragment	FALSE	canonical	3	357	junction_1	22.5745431847468	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAGCACAGTCCAGTAA	NA	False	NA	NA	False	NA	NA	NA	118148620	118092171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ES.24113.93	chr4	-	3897	1	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	6096	-44909	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAACAA	2110	False	NA	NA	False	NA	NA	NA	118142375	118138478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118138500_118142400
ES.24114.1	chr4	-	198	1	Intergenic	novelGene_19803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAACCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	118186768	118186570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118186600_118186800
ES.24115.1	chr4	+	1729	1	FSM	ENSMUSG00000006395.17	ENSMUST00000179719.2	1296	1	-401	-32	-392	32	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTCAAGCATGCTTA	NA	False	NA	NA	False	AATACA	-44	NA	118216794	118218523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118216800_118218500
ES.24115.2	chr4	+	955	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	16	junction_1	6.43333157097011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	118217167	118219941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
ES.24116.1	chr4	+	1020	1	Antisense	novelGene_ENSMUSG00000033253.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAATCCTAAAGCCAATAC	5200	False	NA	NA	False	NA	NA	NA	118234980	118236000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_118235000_118236000
ES.24117.1	chr4	-	6149	11	ISM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	37365	-4001	1917	4001	3prime_fragment	FALSE	canonical	3	24	junction_4	6.19354502688081	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGAGATGGTCCTTCGT	2681	False	NA	NA	False	NA	NA	NA	118229105	118215938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016
ES.24117.10	chr4	-	10966	72	FSM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	-2	1	-2	-1	multi-exon	FALSE	canonical	1	1	junction_33	9.15204721689447	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTCAGTGTGATTTTAAT	3261	False	NA	-6	True	AATATA	-12	NA	118266472	118219940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
ES.24117.11	chr4	-	6193	32	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	6902	-2	intron_retention	FALSE	canonical	1	1	junction_31	8.97806321801769	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTCAGTGTGATTTTAA	8701	False	NA	-7	True	AATATA	-11	NA	118240228	118219941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231074_118231155_118231254_118231369_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154
ES.24117.12	chr4	-	6025	17	NNC	ENSMUSG00000033253.19	novel	3652	21	NA	NA	272	-2	intron_retention	TRUE	non_canonical	0	0	junction_7	12.1177491206082	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTCAGTGTGATTTTAA	1036	False	NA	-7	True	AATATA	-11	NA	118230750	118219941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118224119_118224195_118224440_118224509_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118230329_118230400_118230502_118230621
ES.24117.13	chr4	-	2124	10	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.4127858189084	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTCAGTGTGATTTTAA	1804	False	NA	-7	True	AATATA	-11	NA	118247125	118219941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223436_118246377_118246446_118246569_118246739_118246971
ES.24117.14	chr4	-	10879	72	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_33	9.30373112331379	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGCTCAGTGTGATTTTA	3276	False	NA	-8	True	AATATA	-10	NA	118266457	118219942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245842_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
ES.24117.15	chr4	-	12025	72	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	4352	1	intron_retention	TRUE	canonical	0	0	junction_69	9.80799604159353	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGCTCAGTGTGATTTTA	7615	False	NA	-8	True	AATATA	-10	NA	118262118	118219942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118260292_118260889_118260950_118261319_118261864
ES.24117.16	chr4	-	9803	35	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	4459	1	intron_retention	FALSE	canonical	1	1	junction_27	9.0063414798247	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGCTCAGTGTGATTTTA	6258	False	NA	-8	True	AATATA	-10	NA	118242671	118219942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231254_118231369_118232322_118232654_118232823_118232925_118233091_118233239_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608
ES.24117.19	chr4	-	7267	43	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	4033	-2	intron_retention	FALSE	canonical	1	1	junction_32	9.07264708726555	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACGCTCAGTGTGATT	5832	False	NA	-11	True	AATATA	-7	NA	118243097	118219945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051
ES.24117.2	chr4	-	10741	71	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	3796	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_49	9.42446880438882	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATTTTAATTCAGAGG	7059	False	NA	1	True	AATATA	-19	NA	118262674	118219933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245293_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622
ES.24117.21	chr4	-	6731	19	NNC	ENSMUSG00000033253.19	novel	3652	21	NA	NA	-312	-3	intron_retention	TRUE	non_canonical	0	0	junction_7	11.6978419451128	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAACGCTCAGTGTGAT	3	True	NA	-12	True	AATATA	-6	NA	118231783	118219946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118224116_118224205_118224360_118224452_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231074_118231155_118231254_118231369
ES.24117.22	chr4	-	4134	24	ISM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	19731	16680	391	-6750	internal_fragment	FALSE	canonical	1	1	junction_3	4.89009646921826	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTCCCTATTTTTAATA	2190	False	NA	NA	False	NA	NA	NA	118246739	118236619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569
ES.24117.23	chr4	-	5642	2	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	4743	-6761	intron_retention	FALSE	canonical	3	21	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAAACCAGAGATTCCC	6542	False	NA	NA	False	NA	NA	NA	118242387	118236630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118241777_118241891
ES.24117.3	chr4	-	4431	22	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	-1878	5	intron_retention	FALSE	canonical	3	18	junction_20	7.45082137948729	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGATTTTAATTCAGAG	NA	False	NA	0	True	AATATA	-18	NA	118233349	118219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239
ES.24117.4	chr4	-	8515	54	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	77	4	intron_retention	FALSE	canonical	0	0	junction_22	9.59392681993524	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGATTTTAATTCAGA	1876	False	NA	-1	True	AATATA	-17	NA	118247053	118219935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232846_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971
ES.24117.5	chr4	-	3639	8	NNC	ENSMUSG00000033253.19	novel	3652	21	NA	NA	1437	3	intron_retention	TRUE	non_canonical	0	0	junction_6	17.2603119133734	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTGATTTTAATTCAG	6387	False	NA	-2	True	AATATA	-16	NA	118225399	118219936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118222443_118222545_118222669_118222824_118222979_118223298_118224105_118224195_118224360_118224452
ES.24117.6	chr4	-	3824	18	NIC	ENSMUSG00000033253.19	novel	3652	21	NA	NA	-76	3	intron_retention	FALSE	canonical	3	21	junction_17	6.54608364387932	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTGATTTTAATTCAG	239	False	NA	-2	True	AATATA	-16	NA	118231547	118219936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231074_118231155_118231254_118231369
ES.24117.7	chr4	-	11719	71	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	21	0	intron_retention	FALSE	canonical	1	1	junction_33	9.11070238561132	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCAGTGTGATTTTAATT	3284	False	NA	-5	True	AATATA	-13	NA	118266449	118219939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
ES.24117.8	chr4	-	5721	35	NIC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	6532	0	intron_retention	FALSE	canonical	1	1	junction_32	8.90783256291103	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCAGTGTGATTTTAATT	8331	False	NA	-5	True	AATATA	-13	NA	118240598	118219939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507
ES.24117.9	chr4	-	3946	23	NNC	ENSMUSG00000033253.19	novel	10965	72	NA	NA	-1536	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	9.90700561878202	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCAGTGTGATTTTAATT	NA	False	NA	-5	True	AATATA	-13	NA	118233007	118219939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118220669_118220812_118220882_118221798_118221916_118222014_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925
ES.24118.1	chr4	+	1204	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-61	2	-32	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266501	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.10	chr4	+	3369	3	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	450	junction_1	101.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266560	118272308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118266584_118268081_118269943_118270823
ES.24118.11	chr4	+	1820	6	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	7	junction_2	263.19620058048	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGCCATTCCTTGT	NA	False	NA	28	True	NA	NA	NA	118266564	118272304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118266584_118268081_118268201_118268722_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.12	chr4	+	1119	7	NNC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	250.334054592836	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGCCATTCCTTGT	NA	False	NA	28	True	NA	NA	NA	118266566	118272304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118266584_118268081_118268201_118268872_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.13	chr4	+	2867	5	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	5	2	5	0	intron_retention	FALSE	canonical	3	450	junction_1	106.862937915818	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266567	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860
ES.24118.14	chr4	+	2339	5	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	450	junction_1	104.030043737374	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCCTGCCATTCCTTGT	NA	False	NA	28	True	NA	NA	NA	118266567	118272304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118266584_118268081_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.15	chr4	+	4610	2	NIC	ENSMUSG00000006392.17	novel	1052	8	NA	NA	218	0	intron_retention	FALSE	canonical	3	653	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266815	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118269943_118270823
ES.24118.16	chr4	+	4563	1	NIC	ENSMUSG00000006392.17	novel	1134	7	NA	NA	199	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118267743	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118267700_118272300
ES.24118.17	chr4	+	1088	6	ISM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	1542	2	531	0	3prime_fragment	FALSE	canonical	3	157	junction_1	211.736628857645	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118268075	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.18	chr4	+	1115	6	NNC	ENSMUSG00000006392.17	novel	1052	8	NA	NA	531	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.898955659416	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118268075	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271060_118271920
ES.24118.19	chr4	+	2525	4	NIC	ENSMUSG00000006392.17	novel	1052	8	NA	NA	531	0	intron_retention	FALSE	canonical	3	642	junction_1	38.6810318143431	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118268075	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118268201_118268854_118269690_118269860_118269943_118270823
ES.24118.2	chr4	+	1133	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	-1	2	-1	0	multi-exon	FALSE	canonical	3	157	junction_2	198.998673920763	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266532	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.20	chr4	+	1128	6	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	1513	2	531	0	3prime_fragment	FALSE	canonical	3	642	junction_1	31.4388294947506	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118268075	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.21	chr4	+	1986	5	NIC	ENSMUSG00000006392.17	novel	775	6	NA	NA	531	0	intron_retention	FALSE	canonical	3	46	junction_2	298.562702794572	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118268075	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118268201_118268894_118269050_118269548_118269690_118269860_118269943_118270823
ES.24118.22	chr4	+	3023	1	NIC	ENSMUSG00000006392.17	novel	1743	8	NA	NA	1129	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCCTGGCTCAGGGTT	NA	False	NA	NA	False	AATAAA	-13	NA	118269953	118272976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118270000_118273000
ES.24118.23	chr4	+	1465	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	10	336	10	4	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTGTGTGTGTGTAAA	NA	False	NA	5	True	ATTAAA	-18	NA	118285299	118289814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ES.24118.24	chr4	+	1821	5	NIC	ENSMUSG00000006390.16	novel	1811	8	NA	NA	-9	2	intron_retention	FALSE	canonical	3	120	junction_3	8.74642784226795	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	False	NA	3	True	ATTAAA	-16	NA	118285306	118289812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118285413_118287692_118287753_118287911_118288712_118288793_118288931_118289094
ES.24118.25	chr4	+	4497	1	NIC	ENSMUSG00000006390.16	novel	1811	8	NA	NA	-2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGATTGTGTGTGTGTG	NA	False	NA	1	True	ATTAAA	-14	NA	118285313	118289810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118285300_118289800
ES.24118.26	chr4	+	1243	7	FSM	ENSMUSG00000006390.16	ENSMUST00000102673.11	1248	7	5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.4376862673853	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGATTGTGTGTGTGTG	NA	False	NA	1	True	ATTAAA	-14	NA	118285326	118289810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118285413_118287692_118287753_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ES.24118.27	chr4	+	1824	7	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	321	-343	321	2	3prime_fragment	FALSE	canonical	3	108	junction_4	11.1952370824978	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTGTGTGTGTGTA	NA	False	NA	3	True	ATTAAA	-16	NA	118287218	118289812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ES.24118.3	chr4	+	3223	4	NIC	ENSMUSG00000006392.17	novel	1134	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	450	junction_1	117.769077246769	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266533	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118266584_118268081_118269690_118269860_118269943_118270823
ES.24118.4	chr4	+	1842	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	-26	-671	3	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGGCTCAGGGTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	118266536	118272979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.5	chr4	+	1209	8	NIC	ENSMUSG00000006392.17	novel	1743	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	294.193050598426	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCTGCCATTCCTTGTC	NA	False	NA	29	True	NA	NA	NA	118266543	118272305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118266584_118268081_118268201_118268722_118268771_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ES.24118.6	chr4	+	1970	6	ISM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	10	2	-2	0	intron_retention	FALSE	canonical	3	157	junction_2	212.168423663843	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266543	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823
ES.24118.8	chr4	+	4347	16	Fusion	ENSMUSG00000006390.16_ENSMUSG00000006392.17	novel	1137	8	NA	NA	2	6	intron_retention	FALSE	canonical	0	0	junction_7	281.787579570144	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGTGTGTGTAAATG	NA	False	NA	7	True	ATTAAA	-20	NA	118266554	118289816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920_118271982_118274182_118274254_118284931_118287028_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ES.24118.9	chr4	+	3852	4	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	653	junction_2	34.7083083233203	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	False	NA	30	True	NA	NA	NA	118266554	118272306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118269690_118269860_118269943_118270823_118271073_118271920
ES.24119.1	chr4	-	156	1	Intergenic	novelGene_19804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	118279825	118279669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118279700_118279800
ES.2412.1	chr10	+	139	1	Intergenic	novelGene_1833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19758524	19758663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_19758500_19758700
ES.24120.1	chr4	-	9522	5	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	64	6032	intron_retention	TRUE	canonical	3	1488	junction_1	14.9749791318719	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCAGCAGAGAATTTACT	NA	False	NA	NA	False	NA	NA	NA	118294485	118284065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118292074_118292669_118293363_118293456_118293586_118293706_118293804_118293890
ES.24120.10	chr4	-	2739	7	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	63	-1	intron_retention	FALSE	canonical	3	1508	junction_5	119.859292505838	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294486	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290796_118291947_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.11	chr4	-	3145	7	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	1488	junction_2	126.479247309588	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294577	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890
ES.24120.12	chr4	-	1808	9	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	59	-1	intron_retention	FALSE	canonical	3	1488	junction_3	110.596606525698	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294490	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.13	chr4	-	2114	6	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	59	-1	intron_retention	FALSE	canonical	3	1488	junction_3	127.022202783608	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294490	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118293069_118293165_118293363_118293456
ES.24120.15	chr4	-	3176	6	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	62	-1	intron_retention	FALSE	canonical	3	1488	junction_2	134.606983474113	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294487	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118292074_118292669_118293069_118293165_118293363_118293456_118293804_118293890
ES.24120.16	chr4	-	3486	7	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	59	-1	intron_retention	FALSE	canonical	1	13	junction_6	604.456068617802	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294490	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118290339_118290677_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118293970_118294137
ES.24120.17	chr4	-	2181	6	ISM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	11	1	11	-1	intron_retention	FALSE	canonical	3	1043	junction_4	268.192915640962	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294538	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165
ES.24120.18	chr4	-	3225	8	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	58	-1	intron_retention	FALSE	canonical	3	1043	junction_2	220.88966679761	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294491	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.19	chr4	-	2176	8	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	30	-1	intron_retention	FALSE	canonical	3	1488	junction_2	117.979936032032	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294519	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290796_118291947_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.2	chr4	-	1862	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	-60	-9	-60	9	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCCTACATGCTTCCC	NA	False	NA	-2	True	AATAAA	-26	NA	118294609	118290088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.20	chr4	-	2378	6	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	13	-1	intron_retention	FALSE	canonical	3	1488	junction_2	133.994925277042	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294536	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290796_118291947_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706
ES.24120.21	chr4	-	3577	4	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	59	-2	intron_retention	FALSE	canonical	3	1488	junction_1	166.121107094259	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCCAGCATCCTTCCT	NA	False	NA	-13	True	AATAAA	-15	NA	118294490	118290099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118292074_118292669_118293069_118293165_118293586_118293706
ES.24120.22	chr4	-	3599	4	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	62	-3	intron_retention	FALSE	canonical	3	1488	junction_1	36.790699307781	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCCAGCATCCTTCC	NA	False	NA	-14	True	AATAAA	-14	NA	118294487	118290100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118292074_118292669_118293363_118293456_118294040_118294137
ES.24120.23	chr4	-	3932	6	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	20	-3	intron_retention	FALSE	canonical	3	1508	junction_4	130.655883908839	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCCAGCATCCTTCC	NA	False	NA	-14	True	AATAAA	-14	NA	118294529	118290100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.25	chr4	-	1865	9	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	11	-4	intron_retention	FALSE	canonical	3	1043	junction_4	212.79787945372	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTCCCAGCATCCTTC	NA	False	NA	-15	True	AATAAA	-13	NA	118294538	118290101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118294040_118294137
ES.24120.3	chr4	-	3350	7	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	11	2	intron_retention	FALSE	canonical	3	1488	junction_1	126.023807274657	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCATCCTTCCTACAT	NA	False	NA	-9	True	AATAAA	-19	NA	118294538	118290095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.4	chr4	-	4199	3	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	62	0	intron_retention	FALSE	canonical	3	1529	junction_2	162.5	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294487	118290097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118293069_118293165_118293363_118293456
ES.24120.6	chr4	-	1905	8	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	59	-1	intron_retention	FALSE	canonical	3	1488	junction_3	50.0285632699675	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294490	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ES.24120.7	chr4	-	4292	2	NIC	ENSMUSG00000006398.16	novel	771	7	NA	NA	62	-1	intron_retention	FALSE	canonical	3	1854	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294487	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118293069_118293165
ES.24120.8	chr4	-	1737	10	NNC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	514.67443862871	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	False	NA	-12	True	AATAAA	-16	NA	118294564	118290098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118293970_118294137
ES.24121.1	chr4	-	176	1	Intergenic	novelGene_19805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTCAAGGTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	118296839	118296663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118296700_118296800
ES.24122.1	chr4	-	814	6	ISM	ENSMUSG00000033191.15	ENSMUST00000184261.8	4234	22	15353	0	15353	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTGTGTCTGCACT	NA	False	NA	NA	False	AATAAA	-14	NA	118331599	118328387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_118328790_118329768_118329869_118329988_118330086_118330164_118330206_118331306_118331378_118331496
ES.24123.1	chr4	-	156	1	Intergenic	novelGene_19806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	118360574	118360418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118360400_118360600
ES.24124.1	chr4	+	883	3	FSM	ENSMUSG00000028536.13	ENSMUST00000030261.6	958	3	24	51	24	-51	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTTCACAGTTATTA	8964	False	NA	NA	False	NA	NA	NA	118384463	118387374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118384535_118386395_118386509_118386675
ES.24125.1	chr4	-	147	1	Intergenic	novelGene_19807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	118387877	118387730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118387700_118387900
ES.24126.1	chr4	-	2452	4	FSM	ENSMUSG00000050854.10	ENSMUST00000128098.8	929	4	30	-1553	30	635	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAAGCTAAAGGAGCTA	8039	False	NA	NA	False	AATAAA	-23	NA	118401211	118397502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118401129
ES.24126.2	chr4	-	1858	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	5	1	5	-1	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTCTGCACCATGGC	8330	False	NA	NA	False	AATAAA	-22	NA	118400920	118398138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
ES.24126.3	chr4	-	2019	1	NIC	ENSMUSG00000050854.10	novel	1864	4	NA	NA	-4	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTAGTTCTGTCTGCAC	9087	False	NA	NA	False	AATAAA	-16	NA	118400163	118398144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_118398100_118400200
ES.24126.4	chr4	-	1904	4	FSM	ENSMUSG00000050854.10	ENSMUST00000128098.8	929	4	-92	-883	-92	-35	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAATAAATTATGGG	7917	False	NA	NA	False	ATTAAA	-15	NA	118401333	118398172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118401129
ES.24127.1	chr4	-	180	1	Intergenic	novelGene_19808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	2084	False	NA	NA	False	NA	NA	NA	118407166	118406986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118407000_118407200
ES.24128.1	chr4	-	174	1	Intergenic	novelGene_19809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATAAAAAGA	8201	False	NA	NA	False	NA	NA	NA	118449311	118449137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_118449100_118449300
ES.24129.10	chr4	+	4204	8	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	2261	junction_5	115.990675205785	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118478041	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118482883_118483016
ES.24129.11	chr4	+	1102	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-2	357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	808.266818569215	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118478042	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479276_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.12	chr4	+	2406	8	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-1	358	intron_retention	FALSE	canonical	3	2261	junction_5	115.990675205785	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATACTCTTGGGTTA	NA	False	NA	14	True	AATAAA	-14	NA	118478043	118483173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118482883_118483016
ES.24129.13	chr4	+	4397	7	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	2261	junction_4	120.066185451562	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118478043	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118482883_118483016
ES.24129.14	chr4	+	2287	10	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	762.341195768294	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAGGTTGGTCATGA	NA	False	NA	-2	True	NA	NA	NA	118478045	118484965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016_118484204_118484818
ES.24129.15	chr4	+	1837	7	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	2	357	intron_retention	FALSE	canonical	3	2261	junction_3	111.218628535571	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118478048	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.16	chr4	+	1098	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	4	357	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	792.354156532923	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118478050	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478284_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.2	chr4	+	2958	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	0	2	0	-2	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTCATGATGTCTG	NA	False	NA	4	True	NA	NA	NA	118477995	118484971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.20	chr4	+	2934	7	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	11	364	intron_retention	FALSE	canonical	3	2261	junction_4	112.965579811827	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTGGGTTAAAACCA	NA	False	NA	20	True	AATAAA	-20	NA	118478057	118483179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478363_118478557_118479391_118480494_118480585_118480807_118480884_118481331_118482883_118483016
ES.24129.21	chr4	+	5637	7	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	15	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	914.287275544302	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGGTTGGTCATGATGT	NA	False	NA	1	True	NA	NA	NA	118478061	118484968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478278_118478363_118478557_118479585_118479770_118480585_118480807_118480884_118481331_118482883_118483016
ES.24129.22	chr4	+	1029	7	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	416	1794	-11	364	3prime_fragment	FALSE	canonical	3	2261	junction_3	107.131798371082	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTGGGTTAAAACCA	NA	False	NA	20	True	AATAAA	-20	NA	118478411	118483179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.23	chr4	+	2288	4	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	2810	4	2383	-4	3prime_fragment	FALSE	canonical	3	2339	junction_3	93.1104481546274	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118480805	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.24	chr4	+	3389	1	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	3158	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118481580	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118481600_118485000
ES.24129.25	chr4	+	1145	1	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	3605	357	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	474	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118482027	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118482000_118483200
ES.24129.26	chr4	+	1015	2	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	4895	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118483317	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118484204_118484840
ES.24129.3	chr4	+	1159	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	10	1791	10	367	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGGGTTAAAACCAGAT	NA	False	NA	23	True	AATAAA	-23	NA	118478005	118483182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.4	chr4	+	1681	8	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	14	357	intron_retention	FALSE	canonical	3	2261	junction_4	105.413084421939	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118478009	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478363_118478557_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.5	chr4	+	1092	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-13	357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	801.059991121139	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGATACTCTTGGGTT	NA	False	NA	13	True	AATAAA	-13	NA	118478031	118483172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481395_118482719_118482883_118483016
ES.24129.6	chr4	+	3453	8	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	2261	junction_4	105.413084421939	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTTGGTCATGATGTC	NA	False	NA	2	True	NA	NA	NA	118478034	118484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118478195_118478278_118478363_118478557_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.7	chr4	+	2031	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	45	884	-4	-884	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACAGATTCAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	118478040	118484089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ES.24129.8	chr4	+	2699	7	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	-4	354	intron_retention	FALSE	non_canonical	0	0	junction_3	922.025924557198	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAAAGATACTCTTGG	NA	False	NA	10	True	AATAAA	-10	NA	118478040	118483169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118478195_118478278_118478363_118478557_118479585_118479770_118480585_118480807_118480884_118481331_118481426_118482719
ES.2413.1	chr10	-	2127	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	8	5964	8	925	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTAATACTTACTT	NA	False	NA	NA	False	NA	NA	NA	19783427	19735609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
ES.2413.2	chr10	-	1863	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	39	6197	1	692	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCCTGTTGAGCCA	NA	False	NA	NA	False	AATAAA	-16	NA	19783396	19735842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
ES.2413.3	chr10	-	1482	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	0	6617	0	272	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATGTCAATGAGGTTG	NA	False	NA	-1	True	AATAAA	-27	NA	19783435	19736262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
ES.2413.4	chr10	-	801	1	NIC	ENSMUSG00000020003.17	novel	8099	10	NA	NA	8353	268	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGACATGTCAATGAG	NA	False	NA	-5	True	AATAAA	-23	NA	19737067	19736266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_19736300_19737100
ES.2413.5	chr10	-	5777	3	Fusion	ENSMUSG00000020003.17_ENSMUSG00000111067.2	novel	587	2	NA	NA	-368	263	multi-exon	TRUE	non_canonical	0	0	junction_2	71.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTTATGACATGTCA	NA	False	NA	-10	True	AATAAA	-18	NA	19750561	19736271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_19736741_19745039_19748206_19748419
ES.2413.6	chr10	-	1547	11	NNC	ENSMUSG00000020003.17	novel	8099	10	NA	NA	-10	263	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	58.9901686724152	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTTATGACATGTCA	NA	False	NA	-10	True	AATAAA	-18	NA	19783407	19736271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19781840_19781943_19783204
ES.24130.1	chr4	-	1320	4	NNC	ENSMUSG00000087238.2	novel	326	2	NA	NA	-46	86533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	118854441	118754721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_118755555_118762700_118762801_118798636_118798845_118854262
ES.24131.1	chr4	+	175	1	Intergenic	novelGene_19810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	118873235	118873410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118873200_118873400
ES.24132.1	chr4	+	467	3	Intergenic	novelGene_19811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGGAGCTTGTATAAT	NA	False	NA	NA	False	NA	NA	NA	118930214	118941588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118930271_118930792_118930857_118941241
ES.24132.2	chr4	+	525	3	Intergenic	novelGene_19812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACAGGAGCTTGTATAA	NA	False	NA	NA	False	NA	NA	NA	118930377	118941587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_118930493_118930792_118930857_118941241
ES.24133.1	chr4	+	2909	12	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-2750	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	266.104714366853	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTGTGGATTGGGGC	1165	False	NA	45	True	TATAAA	-27	NA	118963157	118994536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118963361_118965225_118965286_118965877_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.11	chr4	+	1823	7	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	255.372712368065	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTGGTTTCAAATGC	665	False	NA	31	True	TATAAA	-13	NA	118965996	118994522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118966051_118990366_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.12	chr4	+	2508	10	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-4	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	221.045495568471	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTGGTTTCAAATGC	665	False	NA	31	True	TATAAA	-13	NA	118965996	118994522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118966174_118977596_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.13	chr4	+	2607	9	NIC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	565	junction_3	56.7735358683956	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	665	False	NA	33	True	TATAAA	-15	NA	118965996	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.15	chr4	+	2505	10	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	216.910518047203	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	669	False	NA	33	True	TATAAA	-15	NA	118966000	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993448
ES.24133.16	chr4	+	2348	9	FSM	ENSMUSG00000028645.12	ENSMUST00000174372.3	2241	9	-110	3	0	-3	multi-exon	FALSE	canonical	1	8	junction_4	226.359779996359	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	669	False	NA	33	True	TATAAA	-15	NA	118966000	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.18	chr4	+	2591	11	NIC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	3	-34	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	273.7542693731	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAAGCAGATATAAATGG	672	False	NA	2	True	AATACA	-22	NA	118966003	118994493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118966170_118973203_118973318_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.2	chr4	+	2689	13	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-2668	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	321.094179676652	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	1247	False	NA	33	True	TATAAA	-15	NA	118963239	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118963361_118965225_118965286_118966117_118966170_118973203_118973318_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.20	chr4	+	7301	9	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	18119	-3	intron_retention	TRUE	canonical	0	0	junction_1	230.569946003377	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	NA	False	NA	33	True	TATAAA	-15	NA	118984229	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118988300_118988334_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.21	chr4	+	3646	8	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	21862	-5	intron_retention	TRUE	canonical	0	0	junction_1	246.350422391042	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTGGTTTCAAATGC	502	False	NA	31	True	TATAAA	-13	NA	118987972	118994522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118988298_118988334_118989481_118989639_118989881_118990293_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.22	chr4	+	2520	5	NIC	ENSMUSG00000028645.12	novel	2241	9	NA	NA	23599	-3	intron_retention	FALSE	canonical	3	663	junction_3	32.9725264424793	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	2239	False	NA	33	True	TATAAA	-15	NA	118989709	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.3	chr4	+	2556	12	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-2649	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	265.725795411562	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	1266	False	NA	33	True	TATAAA	-15	NA	118963258	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118963361_118965225_118965286_118966117_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.5	chr4	+	1926	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	37	1297	37	-644	multi-exon	FALSE	canonical	3	565	junction_3	58.8236535946402	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGATTTTGTTATTT	613	False	NA	NA	False	NA	NA	NA	118965944	118993883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ES.24133.8	chr4	+	2564	10	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	221.55009466133	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	628	False	NA	33	True	TATAAA	-15	NA	118965959	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992913_118993130_118993442
ES.24133.9	chr4	+	2524	10	NNC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	220.929350195436	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTTCAAATGCTT	665	False	NA	33	True	TATAAA	-15	NA	118965996	118994524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991173_118991572_118991668_118992925_118993130_118993442
ES.24134.1	chr4	+	175	1	Intergenic	novelGene_19813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	119012820	119012995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119012800_119013000
ES.24135.1	chr4	-	158	1	Intergenic	novelGene_19814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	119014876	119014718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119014700_119014900
ES.24136.1	chr4	-	1572	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	9	7	9	-4	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACCTGTGTACTTAT	NA	False	NA	-5	True	AGTAAA	-12	NA	119031383	119026716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119028240_119031334
ES.24136.2	chr4	-	2055	2	FSM	ENSMUSG00000045268.14	ENSMUST00000179290.8	1721	2	-338	4	1	-4	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACCTGTGTACTTAT	NA	False	NA	-5	True	AGTAAA	-12	NA	119031391	119026716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119028240_119030859
ES.24137.1	chr4	+	763	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	-30	0	-30	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052472	119058495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119052684_119053068_119053219_119058093
ES.24137.2	chr4	+	726	4	FSM	ENSMUSG00000028643.12	ENSMUST00000106345.3	684	4	-42	0	-42	0	multi-exon	FALSE	canonical	0	0	junction_2	208.740668454105	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052561	119058495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119052684_119053068_119053219_119055955_119056008_119058093
ES.24137.3	chr4	+	783	3	FSM	ENSMUSG00000028643.12	ENSMUST00000097908.4	832	3	21	28	21	-28	multi-exon	FALSE	canonical	2	48	junction_1	197.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAAAATAATAAAATTCA	NA	False	NA	-17	True	NA	NA	NA	119052713	119058467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119052973_119053068_119053219_119058093
ES.24137.4	chr4	+	4658	1	NIC	ENSMUSG00000028643.12	novel	733	3	NA	NA	732	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTTGTTCTTGCTTTAGA	NA	False	NA	10	True	AATAAA	-13	NA	119053836	119058494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119053800_119058500
ES.24138.1	chr4	+	324	1	Antisense	novelGene_ENSMUSG00000078584.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGCAGATGTACTCAAA	NA	False	NA	NA	False	AATAAA	-6	NA	119061116	119061440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119061100_119061400
ES.24139.1	chr4	+	4963	2	NNC	ENSMUSG00000085626.2	novel	642	2	NA	NA	-2628	896	intron_retention	FALSE	canonical	3	41	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAGGATGGACACATA	5659	False	NA	NA	False	NA	NA	NA	119077742	119082908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119079097_119079299
ES.24139.3	chr4	+	6669	3	NNC	ENSMUSG00000085626.2	novel	642	2	NA	NA	-2522	2981	intron_retention	FALSE	non_canonical	0	0	junction_2	20.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCATAGGGTTAACCTG	5765	False	NA	NA	False	NA	NA	NA	119077848	119084993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119079097_119079299_119083724_119083996
ES.2414.1	chr10	-	175	1	Intergenic	novelGene_1834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	19807192	19807017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_19807000_19807200
ES.24140.1	chr4	+	2728	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-138	598	-138	2	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119089973	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.10	chr4	+	5028	14	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-14	3	intron_retention	FALSE	canonical	1	1	junction_8	106.859471950605	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTTGTTCCAAGAGAGA	NA	False	NA	11	True	AATAAA	-23	NA	119090097	119105572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119099100_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641
ES.24140.11	chr4	+	3884	16	NNC	ENSMUSG00000028641.17	novel	2977	16	NA	NA	-13	1	intron_retention	FALSE	canonical	0	0	junction_2	161.871004884205	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGTTTGTTCCAAG	NA	False	NA	6	True	AATAAA	-18	NA	119090098	119105567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119093779_119093970_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119099967_119100067_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.12	chr4	+	3351	16	NNC	ENSMUSG00000028641.17	novel	2977	16	NA	NA	-10	1	intron_retention	FALSE	canonical	0	0	junction_5	160.861762599652	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGTGGTTTGTGTA	NA	False	NA	3	True	NA	NA	NA	119090101	119106171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119096284_119096371_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104262_119104404_119104641_119104783_119105087
ES.24140.13	chr4	+	2585	15	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-3	2	intron_retention	FALSE	canonical	1	3	junction_14	103.700928891988	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090108	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104775_119105087
ES.24140.16	chr4	+	884	2	ISM	ENSMUSG00000028641.17	ENSMUST00000153940.8	2278	17	-28	12751	3	-1316	5prime_fragment	FALSE	canonical	3	383	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTGAGTACACTGTC	NA	False	NA	NA	False	NA	NA	NA	119090114	119092813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_119090628_119092442
ES.24140.17	chr4	+	2907	14	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_2	168.346044006221	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGTTTGTTCCAAG	NA	False	NA	6	True	AATAAA	-18	NA	119090114	119105567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119099085_119099222_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.19	chr4	+	3359	15	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_3	108.792842839321	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTAGTGGTTTGTTCCA	NA	False	NA	4	True	AATAAA	-16	NA	119090114	119105565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094394_119094513_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.2	chr4	+	3248	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	-52	-8	-52	5	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGTGTATCTCTA	NA	False	NA	9	True	NA	NA	NA	119090059	119106177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.20	chr4	+	2265	13	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_2	117.199971558586	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090114	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.22	chr4	+	2724	14	NIC	ENSMUSG00000028641.17	novel	2750	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	347	junction_5	38.9010275035044	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTTTGTTCCAAGAG	NA	False	NA	8	True	AATAAA	-20	NA	119090123	119105569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.23	chr4	+	4104	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-12	1	intron_retention	FALSE	canonical	2	3	junction_2	112.165821878294	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGTTTGTTCCAAG	NA	False	NA	6	True	AATAAA	-18	NA	119090123	119105567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093970_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.24	chr4	+	2420	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-7	2	intron_retention	FALSE	canonical	0	0	junction_1	112.839887613762	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090128	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.25	chr4	+	2920	13	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_3	117.091933254744	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGTTTGTGTATC	NA	False	NA	5	True	NA	NA	NA	119090128	119106173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119098296_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.26	chr4	+	2749	13	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_2	114.902494896035	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTTAGTGGTTTGTTC	NA	False	NA	2	True	AATAAA	-14	NA	119090132	119105563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.27	chr4	+	2931	14	NIC	ENSMUSG00000028641.17	novel	2278	17	NA	NA	2	0	intron_retention	FALSE	canonical	2	3	junction_2	109.737772431487	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTAGTGGTTTGTTCC	NA	False	NA	3	True	AATAAA	-15	NA	119090144	119105564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093970_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.28	chr4	+	3655	15	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_9	139.951759181366	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGGTTTGTGT	NA	False	NA	2	True	NA	NA	NA	119090144	119106170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119099100_119099222_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.29	chr4	+	3933	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	347	junction_4	39.0946355980508	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTTTGTTCCAAGAG	NA	False	NA	8	True	AATAAA	-20	NA	119090144	119105569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.3	chr4	+	2651	15	FSM	ENSMUSG00000028641.17	ENSMUST00000030393.13	3188	15	-64	601	-40	2	multi-exon	FALSE	canonical	1	2	junction_7	108.340567524028	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090071	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098858_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.30	chr4	+	2637	13	NIC	ENSMUSG00000028641.17	novel	2750	15	NA	NA	-406	2	intron_retention	FALSE	canonical	3	347	junction_5	37.3147275065608	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090590	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.31	chr4	+	2286	12	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	3474	603	-636	1	3prime_fragment	FALSE	canonical	3	347	junction_2	41.8440631372565	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGTTTGTTCCAAG	NA	False	NA	6	True	AATAAA	-18	NA	119094502	119105567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.4	chr4	+	2486	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-28	2	intron_retention	FALSE	canonical	2	3	junction_3	111.878685354657	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090083	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.5	chr4	+	2752	16	NNC	ENSMUSG00000028641.17	novel	2977	16	NA	NA	-28	1	intron_retention	FALSE	canonical	0	0	junction_7	161.833659457275	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGGTTTGTTCCAAG	NA	False	NA	6	True	AATAAA	-18	NA	119090083	119105567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098862_119099002_119099100_119099222_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.6	chr4	+	2474	15	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_9	108.71665569033	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGTGGTTTGTTCCAA	NA	False	NA	5	True	AATAAA	-17	NA	119090083	119105566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101266_119101639_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24140.7	chr4	+	3407	13	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-27	1	intron_retention	FALSE	canonical	0	0	junction_2	114.902494896035	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGTTTGTGTATC	NA	False	NA	5	True	NA	NA	NA	119090084	119106173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.8	chr4	+	3594	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	-27	0	intron_retention	FALSE	canonical	3	347	junction_5	36.3414119820911	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGGTTTGTGT	NA	False	NA	2	True	NA	NA	NA	119090084	119106170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119104404_119104641_119104783_119105087
ES.24140.9	chr4	+	2665	14	NNC	ENSMUSG00000028641.17	novel	2750	15	NA	NA	-18	2	intron_retention	FALSE	canonical	0	0	junction_2	172.124456142545	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTTGTTCCAAGAGAG	NA	False	NA	10	True	AATAAA	-22	NA	119090093	119105571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119090628_119092442_119092596_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119099002_119099967_119100067_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ES.24141.1	chr4	-	3415	6	Fusion	ENSMUSG00000028642.8_ENSMUSG00000078584.10	novel	657	6	NA	NA	-6	-144	multi-exon	FALSE	canonical	1	1	junction_1	151.321644188794	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTACGTCTCTGGGTTGT	NA	False	NA	NA	False	CATAAA	-4	NA	119089888	119060910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_119062993_119082835_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.11	chr4	-	7087	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	12	junction_4	164.079820514285	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTTGTTCCCCGACT	NA	False	NA	NA	False	NA	NA	NA	119089887	119077038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
ES.24141.12	chr4	-	7007	4	NIC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	29	junction_3	165.023903992388	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGCTTGTTCCCCGA	NA	False	NA	NA	False	NA	NA	NA	119089883	119077040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089779
ES.24141.13	chr4	-	6818	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-1	-5	intron_retention	TRUE	non_canonical	0	0	junction_1	151.713414041079	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGTTTTGCTTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	119089883	119077043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119077927_119078228_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.14	chr4	-	6693	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-1	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	169.259231653697	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAAGTTTTGCTTGTTCC	NA	False	NA	NA	False	NA	NA	NA	119089883	119077044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119078566_119079104_119083725_119083997_119084130_119085223_119085311_119089550
ES.24141.15	chr4	-	6979	4	NIC	ENSMUSG00000078584.10	novel	441	5	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	9	junction_3	174.450247603404	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAAGTTTTGCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	119089913	119077045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089832
ES.24141.16	chr4	-	6425	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	29	697	2	-697	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTCACATCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	119089880	119077735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.17	chr4	-	4953	4	NIC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-6	-2061	intron_retention	FALSE	canonical	3	29	junction_3	165.023903992388	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGCTGGCTCTGCCGG	NA	False	NA	NA	False	NA	NA	NA	119089888	119079099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089779
ES.24141.18	chr4	-	6100	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	-1015	2066	-1015	-2066	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCAACCTTGCTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	119090924	119079104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.19	chr4	-	5016	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-1	-2067	intron_retention	FALSE	canonical	3	12	junction_4	164.079820514285	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCAACCTTGCTGGCTC	NA	False	NA	NA	False	NA	NA	NA	119089883	119079105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
ES.24141.2	chr4	-	1836	6	NIC	ENSMUSG00000078584.10	novel	3689	5	NA	NA	3	-1684	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	186.939134479648	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTCTACCCAATGCC	NA	False	NA	NA	False	AATAAA	-14	NA	119089902	119062450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119062993_119082835_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
ES.24141.20	chr4	-	4162	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	28	2961	1	-2961	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGCCGCTGAGTCATC	NA	False	NA	NA	False	NA	NA	NA	119089881	119079999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.21	chr4	-	6009	4	ISM	ENSMUSG00000078584.10	ENSMUST00000046260.13	657	6	1868	-3498	1868	-3042	3prime_fragment	FALSE	canonical	3	23	junction_3	167.851786473133	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCCTGTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119088007	119080080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_119083725_119083997_119084130_119085223_119085311_119085861
ES.24141.22	chr4	-	3921	4	NIC	ENSMUSG00000078584.10	novel	441	5	NA	NA	-10	-3044	intron_retention	FALSE	canonical	3	9	junction_3	174.450247603404	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGTCCTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	119089892	119080082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089832
ES.24141.23	chr4	-	4024	5	FSM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-1	-3582	-1	-3048	multi-exon	FALSE	canonical	3	17	junction_4	161.922049147113	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCAGTGTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	119089883	119080086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
ES.24141.24	chr4	-	3740	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	46	3365	12	3175	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTAAGACTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	119089863	119080403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.25	chr4	-	111	2	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	8338	2432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTACGCCCACTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	119081537	119081146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119081208_119081487
ES.24141.26	chr4	-	2107	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	19	5025	-8	1515	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGGACGTGCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	119089890	119082063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.27	chr4	-	1181	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	-2	637	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	164.079820514285	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGCTGTTTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	119089884	119082941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
ES.24141.28	chr4	-	1223	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	5903	-2	637	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGCTGTTTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	119089884	119082941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.29	chr4	-	1064	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	7	6080	3	460	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAGCAAACGAAACC	NA	False	NA	82	True	NA	NA	NA	119089902	119083118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.3	chr4	-	908	6	Fusion	ENSMUSG00000028642.8_ENSMUSG00000078584.10	novel	657	6	NA	NA	1	-404	multi-exon	FALSE	canonical	0	0	junction_1	151.713414041079	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTGCTTCTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	119089881	119062707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_119062993_119083538_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.30	chr4	-	1067	6	FSM	ENSMUSG00000078584.10	ENSMUST00000046260.13	657	6	-35	-375	-1	375	multi-exon	FALSE	canonical	1	5	junction_4	170.314532556679	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTTTCTTTGTGTCT	NA	False	NA	-3	True	NA	NA	NA	119089910	119083203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119085861_119085942_119089550_119089667_119089779
ES.24141.31	chr4	-	1069	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	7	372	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	171.331725024877	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTGTCTTTCTTTGTG	NA	False	NA	-6	True	NA	NA	NA	119089898	119083206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119085861_119085959_119089550_119089667_119089779
ES.24141.32	chr4	-	928	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	25	6198	-2	342	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGTGGTGAGTCGTTC	NA	False	NA	-36	True	NA	NA	NA	119089884	119083236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.33	chr4	-	1795	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	-998	6354	-998	186	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGTTTTGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	119090907	119083392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.34	chr4	-	709	5	FSM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	6	-274	-1	184	multi-exon	FALSE	canonical	3	17	junction_4	161.922049147113	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTGCTGGTTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	119089876	119083394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
ES.24141.35	chr4	-	617	4	NIC	ENSMUSG00000078584.10	novel	441	5	NA	NA	-2	173	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	174.450247603404	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGATGATGTAGCTGCT	NA	False	NA	NA	False	NA	NA	NA	119089911	119083405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089832
ES.24141.36	chr4	-	4444	5	NIC	ENSMUSG00000078584.10	novel	657	6	NA	NA	1	172	intron_retention	FALSE	canonical	3	23	junction_3	147.420317459976	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGATGTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	119089881	119083406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119083725_119083997_119084130_119085223_119085311_119085861_119089667_119089779
ES.24141.37	chr4	-	854	6	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-2	171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	171.331725024877	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTTGATGATGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	119089884	119083407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119085861_119085959_119089550_119089667_119089779
ES.24141.4	chr4	-	1628	6	Fusion	ENSMUSG00000028642.8_ENSMUSG00000078584.10	novel	657	6	NA	NA	3	-408	multi-exon	FALSE	canonical	1	1	junction_1	151.321644188794	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAACCTTTGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	119089902	119062711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_119062993_119082835_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.5	chr4	-	3919	1	NIC	ENSMUSG00000028642.8	novel	1504	7	NA	NA	1273	-7919	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGACTTGATTCTTT	NA	False	NA	NA	False	GATAAA	-37	NA	119074141	119070222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119070200_119074100
ES.24141.6	chr4	-	7169	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	1	-19	1	19	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTCATGACTTAATGACA	NA	False	NA	NA	False	NA	NA	NA	119089908	119077019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.7	chr4	-	6803	7	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-11	4	intron_retention	TRUE	non_canonical	0	0	junction_2	167.376239519101	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTCCCCGACTAGCT	NA	False	NA	NA	False	NA	NA	NA	119089893	119077034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119077467_119077600_119079104_119079305_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24141.8	chr4	-	7077	5	FSM	ENSMUSG00000078584.10	ENSMUST00000144309.2	441	5	-4	-6632	-4	2	multi-exon	FALSE	canonical	3	17	junction_4	161.922049147113	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTCCCCGACTAG	NA	False	NA	NA	False	NA	NA	NA	119089886	119077036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089832
ES.24141.9	chr4	-	6785	7	NNC	ENSMUSG00000078584.10	novel	657	6	NA	NA	-3	2	intron_retention	TRUE	non_canonical	0	0	junction_1	177.337405968272	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTCCCCGACTAG	NA	False	NA	NA	False	NA	NA	NA	119089878	119077036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119077439_119077572_119079104_119079306_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ES.24142.1	chr4	-	1351	2	Antisense	novelGene_ENSMUSG00000028641.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCGAAAAACCAAAATAAGTA	5751	False	NA	NA	False	NA	NA	NA	119102237	119100788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_119101994_119102091
ES.24143.1	chr4	+	4590	1	Genic_Genomic	ENSMUSG00000066058.12	novel	NA	NA	NA	NA	-153	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTGACATCATCCT	3152	False	NA	NA	False	NA	NA	NA	119112457	119117047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_119112500_119117000
ES.24143.2	chr4	+	561	5	NNC	ENSMUSG00000066058.12	novel	924	5	NA	NA	1188	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22474487139159	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGTGTGACATCATCC	4588	False	NA	NA	False	NA	NA	NA	119113893	119117046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119113919_119114082_119114248_119114348_119114434_119116004_119116158_119116913
ES.24143.3	chr4	+	1466	3	ISM	ENSMUSG00000066058.12	ENSMUST00000084309.12	924	5	1302	2	1207	-2	intron_retention	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGACATCATCCTATC	4607	False	NA	NA	False	NA	NA	NA	119113912	119117050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_119114248_119114348_119114434_119116004
ES.24144.1	chr4	+	897	1	Genic_Genomic	ENSMUSG00000066058.12	novel	NA	NA	NA	NA	6041	8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGGTTTGCTGGCTGT	9441	False	NA	NA	False	AATAAA	-16	NA	119118746	119119643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_119118700_119119600
ES.24145.1	chr4	-	257	1	Intergenic	novelGene_19815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGGAAAATAAAATTG	3905	False	NA	NA	False	NA	NA	NA	119123445	119123188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119123200_119123400
ES.24146.1	chr4	+	177	1	Intergenic	novelGene_19816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTATT	4170	False	NA	NA	False	NA	NA	NA	119124606	119124783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119124600_119124800
ES.24147.1	chr4	-	3787	1	Intergenic	novelGene_19817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	119132346	119128559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119128600_119132300
ES.24148.1	chr4	+	1987	1	Antisense	novelGene_ENSMUSG00000028639.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACCAACACAGAGCACT	2477	False	NA	NA	False	AAAAAG	-4	NA	119135935	119137922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119135900_119137900
ES.24148.2	chr4	+	9006	2	Antisense	novelGene_ENSMUSG00000028639.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAACCCAAACAACCAA	420	False	NA	NA	False	NA	NA	NA	119137483	119146706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119137699_119137915
ES.24148.3	chr4	+	5903	2	Antisense	novelGene_ENSMUSG00000028639.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCCCACAAACCAAAACC	480	False	NA	NA	False	AATGAA	-45	NA	119137543	119143663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119137703_119137919
ES.24149.1	chr4	-	3595	1	Genic_Genomic	ENSMUSG00000028639.15	novel	NA	NA	NA	NA	-74	2051	mono-exon	FALSE	NA	NA	NA	NA	NA	3123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACACAAACCATTCCCAG	NA	False	NA	NA	False	NA	NA	NA	119136721	119133126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_119133100_119136700
ES.24149.11	chr4	-	1534	8	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	262	junction_2	3531.96674123986	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTAGTTTTGTCATAA	NA	False	NA	NA	False	AATAAA	-14	NA	119151697	119135179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.14	chr4	-	1518	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3590.17206113738	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTCTAGTTTTGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	119151695	119135182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138837_119139328_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.18	chr4	-	1506	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4852.94959849735	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140083_119150938_119151003_119151400
ES.24149.19	chr4	-	1437	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3405.52756329691	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400_119151452_119151527
ES.24149.2	chr4	-	5943	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	2051	intron_retention	FALSE	canonical	3	10083	junction_6	305.596138719062	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACACAAACCATTCCCAG	NA	False	NA	NA	False	NA	NA	NA	119151695	119133126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.20	chr4	-	3576	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4866.23296012657	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137702_119137918_119138850_119139342_119139646_119142305_119142340_119150938_119151003_119151400
ES.24149.21	chr4	-	1406	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3405.52756329691	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151697	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400_119151429_119151537
ES.24149.22	chr4	-	5904	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	3867.88532519889	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137702_119137918_119138850_119139342_119139646_119139977_119142340_119150938_119151003_119151400
ES.24149.23	chr4	-	1510	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3623.36046526212	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151697	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136389_119138763_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.26	chr4	-	1512	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	4345.326510675	3128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138685_119138737_119138818_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.27	chr4	-	1426	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_4	3779.60040877339	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151698	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119142305_119142340_119150938_119151003_119151400
ES.24149.28	chr4	-	1457	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3852.6583030422	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151658	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140083_119150938_119151003_119151400
ES.24149.3	chr4	-	2140	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	104	-616	0	616	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	119151697	119134561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.30	chr4	-	1279	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4421.67886667496	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135217_119135462_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.31	chr4	-	1504	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3852.6583030422	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140080_119150925_119151003_119151400
ES.24149.32	chr4	-	4011	7	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	4911.09538584712	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137702_119137918_119138850_119139342_119140081_119142305_119142340_119150938_119151003_119151400
ES.24149.33	chr4	-	1572	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4461.47396993135	3128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151697	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119148988_119149046_119150938_119151003_119151400
ES.24149.34	chr4	-	1286	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	690	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	4671.72307503301	3128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119150987	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119145534_119145618_119150938
ES.24149.39	chr4	-	3882	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	10083	junction_6	305.596138719062	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151694	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.4	chr4	-	1580	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	52	-4	-52	4	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTCATAATTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	119151749	119135173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.41	chr4	-	4070	5	NNC	ENSMUSG00000028639.15	novel	1054	5	NA	NA	-870	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4562.3359422559	3124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119140859	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137712_119137923_119138850_119139342_119139646_119139977
ES.24149.42	chr4	-	6946	4	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	10083	junction_3	399.871090338985	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119142340_119150938_119151003_119151400
ES.24149.43	chr4	-	1348	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3612.9610898451	3128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151695	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151565
ES.24149.46	chr4	-	1462	9	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3405.52756329691	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119151697	119135186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400_119151430_119151482
ES.24149.49	chr4	-	1391	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	104	133	0	53	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTCATATCTGGTC	NA	False	NA	62	True	AATACA	-16	NA	119151697	119135310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.5	chr4	-	3763	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	9851	junction_2	353.068336161712	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTTGTCATAATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119151696	119135175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119142340_119150938_119151003_119151400
ES.24149.50	chr4	-	2698	1	Intergenic	novelGene_19818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2948	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTTCCAGCAAGTCGA	NA	False	NA	NA	False	AATAAA	-16	NA	119146314	119143616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119143600_119146300
ES.24149.51	chr4	-	3317	2	FSM	ENSMUSG00000028639.15	ENSMUST00000152733.2	479	2	2	-2840	2	2840	multi-exon	FALSE	canonical	3	10083	junction_1	0	2950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGGATGTATGTATCT	NA	False	NA	NA	False	NA	NA	NA	119151695	119147980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119151003_119151400
ES.24149.52	chr4	-	3715	1	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	2840	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2950	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGGATGTATGTATCT	NA	False	NA	NA	False	NA	NA	NA	119151695	119147980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119148000_119151700
ES.24149.6	chr4	-	6249	6	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	2	intron_retention	FALSE	canonical	3	33	junction_2	4158.70152812149	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTTGTCATAATTGA	NA	False	NA	NA	False	AATAAA	-18	NA	119151697	119135175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137712_119137928_119138850_119139342_119142340_119150938_119151003_119151400
ES.24149.7	chr4	-	3677	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	3623.36046526212	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119135565_119136130_119137702_119137918_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ES.24149.8	chr4	-	6462	5	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	10083	junction_4	348.549494333301	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151695	119135177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119138850_119139342_119142340_119150938_119151003_119151400
ES.24149.9	chr4	-	4094	6	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	9851	junction_2	381.446510011561	3128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119142340_119150938_119151003_119151400
ES.2415.1	chr10	+	5784	29	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-781	-441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	7.21773255706431	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCGAGAATTCTTACTCT	NA	False	NA	16	True	AGTAAA	-29	NA	19809436	20018058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.10	chr10	+	177	1	Intergenic	novelGene_1835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTTATAAAACC	NA	False	NA	NA	False	NA	NA	NA	19883092	19883269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_19883100_19883300
ES.2415.11	chr10	+	3770	23	NNC	ENSMUSG00000071369.12	novel	513	4	NA	NA	-68535	-446	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.42664151476728	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTCCCGAGAATTCTT	NA	False	NA	11	True	AGTAAA	-24	NA	19906735	20018053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19906916_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.12	chr10	+	182	1	Intergenic	novelGene_1836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTCTACGGCT	NA	False	NA	NA	False	NA	NA	NA	19954380	19954562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_19954400_19954600
ES.2415.13	chr10	+	159	1	Intergenic	novelGene_1837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2123	False	NA	NA	False	NA	NA	NA	19959243	19959402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_19959200_19959400
ES.2415.14	chr10	+	208	1	Intergenic	novelGene_1838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCTAGCTAGAGTTAG	4188	False	NA	NA	False	NA	NA	NA	19961308	19961516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_19961300_19961500
ES.2415.15	chr10	+	1304	1	Intergenic	novelGene_1840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20005716	20007020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20005700_20007000
ES.2415.16	chr10	+	4371	4	ISM	ENSMUSG00000071369.12	ENSMUST00000120259.8	4289	29	198866	-418	8591	418	3prime_fragment	FALSE	canonical	3	27	junction_2	1.24721912892465	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAGAGTAATGGCT	NA	False	NA	NA	False	TATAAA	-25	NA	20009137	20017834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.2	chr10	+	3876	8	ISM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	-780	94694	-780	24360	5prime_fragment	FALSE	canonical	3	18	junction_4	3.79580864445326	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCAGAAATGATACTAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	19809437	19923805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117
ES.2415.3	chr10	+	5318	29	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-540	417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	7.21773255706431	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGAGAGTAATGGC	NA	False	NA	NA	False	TATAAA	-24	NA	19809677	20017833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.4	chr10	+	4135	18	ISM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	-283	37312	-283	4	5prime_fragment	FALSE	canonical	3	18	junction_4	4.23202488202469	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGCGCCTCTTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	19809934	19981187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905
ES.2415.5	chr10	+	5163	28	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-279	-452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	8.74670229843189	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGACAAAGTCCCGAGA	NA	False	NA	5	True	AGTAAA	-18	NA	19809938	20018047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.6	chr10	+	5246	29	NIC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-264	-447	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	7.21773255706431	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGTCCCGAGAATTCT	NA	False	NA	10	True	AGTAAA	-23	NA	19809953	20018052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993890_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ES.2415.7	chr10	+	4050	23	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-223	-8537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	9.06405123514802	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCAATATGGTTCACT	NA	False	NA	NA	False	AATACA	-14	NA	19809994	19994893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160_19994330_19994440
ES.2415.8	chr10	+	4148	22	NNC	ENSMUSG00000071369.12	novel	5450	30	NA	NA	-210	-8537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	7.64282005628148	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCAATATGGTTCACT	NA	False	NA	NA	False	AATACA	-14	NA	19810007	19994893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19993875_19994069_19994160
ES.2415.9	chr10	+	3328	19	ISM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	52	33901	-2	3415	5prime_fragment	FALSE	canonical	3	18	junction_4	5.05402907357518	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCTGTTCTTTCAGTCG	NA	False	NA	NA	False	AATAAA	-16	NA	19810269	19984598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894
ES.24150.1	chr4	+	191	1	Intergenic	novelGene_19819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTTTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	119155210	119155401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119155200_119155400
ES.24151.1	chr4	+	358	2	Antisense	novelGene_ENSMUSG00000060288.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119159201	119166147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119159502_119166089
ES.24151.2	chr4	+	2265	1	Antisense	novelGene_ENSMUSG00000060288.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATCTTTCCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	119163920	119166185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_119163900_119166200
ES.24152.1	chr4	+	230	1	Intergenic	novelGene_19821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGACAGCAGCTGACA	NA	False	NA	2	True	NA	NA	NA	119227055	119227285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119227100_119227300
ES.24153.1	chr4	+	174	1	Intergenic	novelGene_19822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAGAAC	4957	False	NA	NA	False	NA	NA	NA	119241860	119242034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119241900_119242000
ES.24154.1	chr4	-	768	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-11	0	2	0	multi-exon	TRUE	canonical	2	32	junction_8	169.629516415942	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9633	False	NA	-3	True	AATAAA	-19	NA	119177692	119157206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ES.24154.10	chr4	-	3529	24	Fusion	ENSMUSG00000028637.17_ENSMUSG00000060288.14	novel	1288	10	NA	NA	10	-23	multi-exon	FALSE	canonical	0	0	junction_10	150.03186807033	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCAGGGCCTGGTTCTC	9793	False	NA	-25	True	NA	NA	NA	119272648	119164379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605_119177835_119181737_119181806_119188319_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.11	chr4	-	604	9	FSM	ENSMUSG00000060288.14	ENSMUST00000106317.2	613	9	2	7	0	-7	multi-exon	FALSE	canonical	2	4	junction_1	164.818413337224	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCATTTGGAATCCTT	9631	False	NA	NA	False	AATAAA	-14	NA	119177694	119168517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119168634_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ES.24154.12	chr4	-	2553	15	FSM	ENSMUSG00000028637.17	ENSMUST00000238759.2	3909	15	4	1352	-3	21	multi-exon	FALSE	canonical	2	5	junction_1	6.79285338741071	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGTTTTCAATTCTTT	9727	False	NA	NA	False	ATTAAA	-39	NA	119272714	119181014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119181391_119181737_119181806_119188319_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.13	chr4	-	1943	1	FSM	ENSMUSG00000028637.17	ENSMUST00000238511.2	1963	1	1722	-1702	1722	1702	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTCATCTCTGT	3087	False	NA	NA	False	AGTAAA	-14	NA	119186923	119184980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119185000_119186900
ES.24154.14	chr4	-	3706	13	ISM	ENSMUSG00000028637.17	ENSMUST00000238293.2	2458	15	-41	5654	0	-10	5prime_fragment	FALSE	canonical	1	2	junction_8	7.60847480700888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	9742	False	NA	NA	False	NA	NA	NA	119272699	119186692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250753_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.15	chr4	-	1717	10	ISM	ENSMUSG00000028637.17	ENSMUST00000063642.10	2523	15	-2	15913	-2	-24	5prime_fragment	FALSE	canonical	0	0	junction_8	7.5293663760433	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	9721	False	NA	NA	False	NA	NA	NA	119272720	119196955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258342_119261270_119261462_119272332
ES.24154.16	chr4	-	1694	10	ISM	ENSMUSG00000028637.17	ENSMUST00000238759.2	3909	15	25	17295	6	-26	5prime_fragment	FALSE	canonical	3	7	junction_2	6.12825877028341	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAATAAATAAATAAATA	9748	False	NA	NA	False	NA	NA	NA	119272693	119196957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.17	chr4	-	1858	9	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTAGTAATTT	9732	False	NA	NA	False	NA	NA	NA	119272709	119209443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.18	chr4	-	1914	9	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.15454401062709	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTAGTAATTT	9726	False	NA	NA	False	NA	NA	NA	119272715	119209443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119209900_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.19	chr4	-	889	3	NIC	ENSMUSG00000028637.17	novel	1128	4	NA	NA	1	-6	intron_retention	TRUE	canonical	0	0	junction_2	6	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATTTCTGGTGTTAG	2128	False	NA	NA	False	NA	NA	NA	119217088	119209449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119209850_119210266_119210422_119216754
ES.24154.2	chr4	-	752	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	47	1	0	-1	multi-exon	FALSE	canonical	2	32	junction_8	163.771144144263	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTCTGTAGTTACTAT	9629	False	NA	-4	True	AATAAA	-18	NA	119177696	119157207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ES.24154.20	chr4	-	1802	10	NNC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	153	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.60838111516821	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTATTTCTGGTGTTA	9936	False	NA	NA	False	NA	NA	NA	119272505	119209450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250753_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119268639_119268810_119272332
ES.24154.21	chr4	-	1181	6	NIC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.84081444212014	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGAGTTTGTCCTTTTT	9742	False	NA	NA	False	NA	NA	NA	119272699	119230678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119230963_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.22	chr4	-	3041	6	NNC	ENSMUSG00000028637.17	novel	1789	5	NA	NA	-7873	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0119928086271	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGACTACCCGTTTGTT	NA	False	NA	NA	False	TATAAA	-28	NA	119258347	119231327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119233789_119234407_119234543_119238431_119238538_119250738_119250855_119255364_119255437_119258196
ES.24154.23	chr4	-	4810	5	FSM	ENSMUSG00000028637.17	ENSMUST00000238287.2	1789	5	0	-3021	0	869	multi-exon	FALSE	canonical	3	15	junction_4	3.96074487943871	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTGGGTTTTG	9742	False	NA	NA	False	NA	NA	NA	119272699	119246825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ES.24154.24	chr4	-	2967	1	FSM	ENSMUSG00000028637.17	ENSMUST00000135997.3	2780	1	310	-497	310	497	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTATGGAGATGGTT	6999	False	NA	NA	False	NA	NA	NA	119250164	119247197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119247200_119250200
ES.24154.3	chr4	-	752	9	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	186.66208606731	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTCTGTAGTTACTAT	9630	False	NA	-4	True	AATAAA	-18	NA	119177695	119157207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176770_119177344_119177431_119177609
ES.24154.4	chr4	-	782	10	NNC	ENSMUSG00000060288.14	novel	800	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	183.28106999165	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTCTGTAGTTACTAT	9646	False	NA	-4	True	AATAAA	-18	NA	119177679	119157207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177558
ES.24154.5	chr4	-	1281	2	NNC	ENSMUSG00000060288.14	novel	622	8	NA	NA	18807	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGGGTTCTGTAGTT	NA	False	NA	-9	True	AATAAA	-13	NA	119158807	119157212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119157516_119157829
ES.24154.6	chr4	-	229	1	Intergenic	novelGene_19820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCCCTCTCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	119157651	119157422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119157400_119157700
ES.24154.7	chr4	-	2376	10	NNC	ENSMUSG00000060288.14	novel	1288	10	NA	NA	-1	296	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	176.390209968806	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTTCGGGATATG	9643	False	NA	NA	False	AATAAA	-10	NA	119177682	119163485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177267_119177365_119177431_119177605
ES.24154.8	chr4	-	4717	9	ISM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	-11	6607	2	-32	5prime_fragment	FALSE	canonical	2	32	junction_7	168.83794004903	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTAAGAAATATCATATA	9633	False	NA	NA	False	NA	NA	NA	119177692	119163813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ES.24154.9	chr4	-	1263	9	NNC	ENSMUSG00000060288.14	novel	1288	10	NA	NA	4	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.232623256876	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGGGCCTGGTTCTCA	9648	False	NA	-24	True	NA	NA	NA	119177677	119164378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176770_119177348_119177431_119177605
ES.24155.1	chr4	-	1452	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	-6	-3	-6	3	multi-exon	FALSE	canonical	3	273	junction_2	22	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTTCTGGTTTTTTGTT	5499	False	NA	-1	True	AATAAA	-33	NA	119279623	119275723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119276491_119278776_119278881_119279042
ES.24155.2	chr4	-	1598	3	NNC	ENSMUSG00000028636.15	novel	1443	3	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	132	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTTCTGGTTTTTTGTT	5565	False	NA	-1	True	AATAAA	-33	NA	119279557	119275723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119276491_119278564_119278881_119279042
ES.24155.3	chr4	-	1133	3	NNC	ENSMUSG00000028636.15	novel	1443	3	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGGTTTCTGGTTTTTTG	5521	False	NA	-3	True	AATAAA	-31	NA	119279601	119275725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119276491_119278776_119278881_119279337
ES.24155.5	chr4	-	1418	3	NNC	ENSMUSG00000028636.15	novel	954	3	NA	NA	-353	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGCGGGTTTCTGGTTT	5152	False	NA	-7	True	AATAAA	-27	NA	119279970	119275729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119276491_119278564_119278881_119279629
ES.24155.6	chr4	-	1432	3	NNC	ENSMUSG00000028636.15	novel	1443	3	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.5	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGCGGGTTTCTGGTTT	5499	False	NA	-7	True	AATAAA	-27	NA	119279623	119275729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119276491_119278790_119278881_119279042
ES.24156.1	chr4	-	4118	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	-17	-4	-17	4	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATGTCTTGTCTGATT	9956	False	NA	0	True	AATATA	-28	NA	119349842	119322475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
ES.24156.4	chr4	-	4209	7	NNC	ENSMUSG00000048899.9	novel	4097	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.4914511175199	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCTATGTCTTGTCT	9997	False	NA	-4	True	AATATA	-24	NA	119349801	119322479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119338188_119338250_119345566_119345642_119349493
ES.24156.5	chr4	-	3880	5	NNC	ENSMUSG00000048899.9	novel	4097	5	NA	NA	-15754	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.2916164657906	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGTCTTCCTATGTCT	NA	False	NA	-9	True	AATATA	-19	NA	119365579	119322484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119365459
ES.24156.6	chr4	-	4060	5	NNC	ENSMUSG00000048899.9	novel	4097	5	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17.9722007556114	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGTCTTCCTATGTCT	9999	False	NA	-9	True	AATATA	-19	NA	119349799	119322484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119325723_119327663_119327868_119331721_119331803_119334987_119335219_119349493
ES.24156.7	chr4	-	3676	6	NNC	ENSMUSG00000048899.9	novel	4097	5	NA	NA	-15750	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3328735577513	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAACGTCTTCCTATGT	NA	False	NA	-11	True	AATATA	-17	NA	119365575	119322486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_119325142_119325597_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119365201
ES.24157.1	chr4	-	213	1	Intergenic	novelGene_19823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCATTGCTAGATCGC	NA	False	NA	NA	False	AAAACA	-13	NA	119367501	119367288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119367300_119367500
ES.24158.1	chr4	-	176	1	Intergenic	novelGene_19824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTGCCA	1166	False	NA	NA	False	NA	NA	NA	119382667	119382491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119382500_119382700
ES.24159.1	chr4	+	236	1	Intergenic	novelGene_19825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATGTCCTATTTCTTTT	NA	False	NA	NA	False	AAAAAG	-39	NA	119390222	119390458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_119390200_119390500
ES.2416.1	chr10	-	6629	1	Antisense	novelGene_ENSMUSG00000071369.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	19981006	19974377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_19974400_19981000
ES.24160.1	chr4	+	5057	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-397	0	-370	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396487	119486316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.11	chr4	+	5081	12	NIC	ENSMUSG00000032998.17	novel	367	3	NA	NA	198	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	40.3314777707631	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCAGCCTGATGGTCT	NA	False	NA	21	True	AATAAA	-17	NA	119397173	119486314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119397755_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.12	chr4	+	4604	12	ISM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	20940	2	20079	-2	3prime_fragment	FALSE	canonical	3	55	junction_5	29.4011862356966	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCAGCCTGATGGTCT	NA	False	NA	21	True	AATAAA	-17	NA	119417797	119486314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.13	chr4	+	4088	9	NNC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	-35571	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	40.7106788815908	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119442967	119486315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119443022_119459605_119459690_119473704_119473828_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.14	chr4	+	5480	7	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	-18880	-26	intron_retention	FALSE	canonical	3	63	junction_1	21.4139103284654	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATATTATGATA	NA	False	NA	-3	True	NA	NA	NA	119459658	119486290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119480610_119482093_119482202_119483485
ES.24160.15	chr4	+	4701	3	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	274	-1	intron_retention	FALSE	canonical	3	105	junction_1	9	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119478812	119486315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119478900_119480417_119482202_119483485
ES.24160.16	chr4	+	6122	2	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	371	-1	intron_retention	FALSE	canonical	3	123	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119478909	119486315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119482202_119483485
ES.24160.2	chr4	+	5077	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	-287	-1	-287	1	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGCCTGATGGTCTGTG	NA	False	NA	24	True	AATAAA	-20	NA	119396570	119486317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.3	chr4	+	2955	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	-112	1817	-85	-1817	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCATTGGTCCTTCTCT	NA	False	NA	NA	False	GATAAA	-21	NA	119396772	119484499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.4	chr4	+	3023	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	-53	1819	-53	-1819	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCATTGGTCCTTCT	NA	False	NA	NA	False	GATAAA	-19	NA	119396804	119484497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.5	chr4	+	4697	13	NNC	ENSMUSG00000032998.17	novel	4789	13	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	40.6407020936729	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCAGCCTGATGGTC	NA	False	NA	20	True	AATAAA	-16	NA	119396857	119486313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480506_119480610_119482093_119482202_119483485
ES.24160.6	chr4	+	4618	11	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.5662735167213	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396865	119486316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119397043_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.7	chr4	+	4588	11	NIC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	40.7486196085217	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGCAGCCTGATGGT	NA	False	NA	19	True	AATAAA	-15	NA	119396877	119486312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_119397043_119417799_119417861_119430672_119430998_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ES.24160.8	chr4	+	4566	12	NNC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	39.2175538365873	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCAGCCTGATGGTC	NA	False	NA	20	True	AATAAA	-16	NA	119396886	119486313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480506_119480610_119482093_119482202_119483485
ES.24160.9	chr4	+	4490	11	NNC	ENSMUSG00000032998.17	novel	4660	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.5858850883999	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGCCTGATGGTCTG	NA	False	NA	22	True	AATAAA	-18	NA	119396889	119486315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119397043_119417799_119417861_119430672_119430998_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480506_119480610_119482093_119482202_119483485
ES.24161.1	chr4	-	2197	4	NIC	ENSMUSG00000087385.9	novel	1909	4	NA	NA	-102	30	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAACTGAGGTCCTCT	7980	False	NA	NA	False	AAAAAG	-30	NA	119396828	119387474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_119388946_119390509_119390747_119390937_119391007_119396408
ES.24162.1	chr4	-	1864	1	Antisense	novelGene_ENSMUSG00000032998.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACAGCAGCCTACCAAA	3456	False	NA	NA	False	NA	NA	NA	119401352	119399488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_119399500_119401400
ES.24163.1	chr4	-	2900	1	FSM	ENSMUSG00000081678.2	ENSMUST00000119396.2	403	1	-1991	-506	-1991	506	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGAGTCTAGTGTAAT	9140	False	NA	NA	False	NA	NA	NA	119413246	119410346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_119410300_119413200
ES.24164.1	chr4	+	1400	3	NNC	ENSMUSG00000028634.18	novel	1359	3	NA	NA	-18	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGCCAAGCAATGCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	119671509	119730523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_119671988_119729233_119729480_119729847
ES.24165.1	chr4	-	3821	1	Intergenic	novelGene_19826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	119787500	119783679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_119783700_119787500
ES.24166.1	chr4	-	2927	3	NNC	ENSMUSG00000052135.9	novel	2615	2	NA	NA	-388	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.5	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTTGGGTTAGGAGGG	NA	False	NA	2	True	AATAAA	-19	NA	120144934	120124272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120126380_120144035_120144789_120144867
ES.24166.2	chr4	-	3014	2	FSM	ENSMUSG00000052135.9	ENSMUST00000102656.4	2615	2	-399	0	-399	0	multi-exon	FALSE	canonical	3	61	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCTTGGGTTAGGA	NA	False	NA	-1	True	AATAAA	-16	NA	120144945	120124275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120126380_120144035
ES.24166.3	chr4	-	2205	2	NNC	ENSMUSG00000052135.9	novel	2615	2	NA	NA	4729	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCTTGGGTTAGGA	NA	False	NA	-1	True	AATAAA	-16	NA	120139817	120124275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120126380_120139716
ES.24166.5	chr4	-	2176	2	NNC	ENSMUSG00000052135.9	novel	2615	2	NA	NA	4042	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCCCGAGCCTTGG	NA	False	NA	-8	True	AATAAA	-9	NA	120140504	120124282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120126380_120140425
ES.24167.1	chr4	-	178	1	Intergenic	novelGene_19827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCAGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	120205193	120205015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120205000_120205200
ES.24168.1	chr4	+	3500	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	-144	-3	-118	1	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262359	120387384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.10	chr4	+	3033	14	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_3	18.4368424564325	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCGTGTCTTTTTAA	NA	False	NA	8	True	AATAAA	-10	NA	120262475	120387377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120325537_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.11	chr4	+	3470	18	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_4	25.3759278896945	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAATACAAAT	NA	False	NA	-8	True	NA	NA	NA	120262481	120387361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385500_120386444
ES.24168.12	chr4	+	5658	16	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-24	1	intron_retention	FALSE	canonical	2	4	junction_13	17.3914410622646	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262538	120387384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374264_120379651_120382261_120385352_120385496_120386330
ES.24168.13	chr4	+	3165	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_16	17.5316677757708	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTGTCTTTTTAACCA	NA	False	NA	11	True	AATAAA	-13	NA	120262580	120387380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385500_120386444
ES.24168.14	chr4	+	179	1	Intergenic	novelGene_19828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGATGAAGAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	120273826	120274005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120273800_120274000
ES.24168.15	chr4	+	4795	1	Intergenic	novelGene_19829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCTGAGAAGTTATCAA	NA	False	NA	NA	False	NA	NA	NA	120275348	120280143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120275300_120280100
ES.24168.16	chr4	+	177	1	Intergenic	novelGene_19831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGACATGAATT	788	False	NA	NA	False	NA	NA	NA	120292136	120292313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120292100_120292300
ES.24168.17	chr4	+	4997	13	FSM	ENSMUSG00000000085.17	ENSMUST00000106298.10	1995	13	-2075	-927	-2075	0	multi-exon	FALSE	canonical	3	47	junction_9	9.9537123169644	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTCTTTTTAACCAGTT	NA	False	NA	14	True	AATAAA	-16	NA	120317201	120387383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.18	chr4	+	1548	5	FSM	ENSMUSG00000000085.17	ENSMUST00000136801.8	1536	5	-32	20	-32	2	multi-exon	FALSE	canonical	3	10	junction_1	26.8735464723211	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAATACAAAT	NA	False	NA	-8	True	NA	NA	NA	120374790	120387361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120374904_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.19	chr4	+	5266	2	FSM	ENSMUSG00000000085.17	ENSMUST00000133290.2	557	2	-3744	-965	-3744	1	multi-exon	FALSE	canonical	3	78	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTCTTTTTAACCAGT	NA	False	NA	13	True	AATAAA	-15	NA	120381281	120387382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120385496_120386330
ES.24168.2	chr4	+	3519	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-110	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	18.0441082835922	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGTGTCTTTTTAACCA	NA	False	NA	11	True	AATAAA	-13	NA	120262367	120387380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310409_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.3	chr4	+	3707	18	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-100	1	intron_retention	FALSE	canonical	0	0	junction_4	22.223308316404	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262377	120387384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.4	chr4	+	3309	16	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-88	-4	intron_retention	FALSE	canonical	2	3	junction_4	22.6338978820117	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCGTGTCTTTTTAA	NA	False	NA	8	True	AATAAA	-10	NA	120262389	120387377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374264_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.5	chr4	+	3677	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-85	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	22.7801139977393	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCGTGTCTTTTTAA	NA	False	NA	8	True	AATAAA	-10	NA	120262392	120387377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120313465_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.6	chr4	+	3536	17	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-79	-4	intron_retention	FALSE	canonical	0	0	junction_4	23.1374122094499	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCGTGTCTTTTTAA	NA	False	NA	8	True	AATAAA	-10	NA	120262398	120387377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.7	chr4	+	3498	17	NNC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-68	1	intron_retention	FALSE	canonical	2	2	junction_3	17.5880596925869	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262409	120387384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310900_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24168.9	chr4	+	3247	16	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	-8	1	intron_retention	FALSE	canonical	2	3	junction_4	17.8574603146385	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTAACCAGTTG	NA	False	NA	15	True	AATAAA	-17	NA	120262469	120387384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ES.24169.1	chr4	-	247	1	Intergenic	novelGene_19830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120289285	120289038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120289000_120289300
ES.2417.1	chr10	-	178	1	Intergenic	novelGene_1839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	19982687	19982509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_19982500_19982700
ES.24170.1	chr4	-	173	1	Intergenic	novelGene_19832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120338765	120338592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120338600_120338800
ES.24171.1	chr4	-	260	1	Intergenic	novelGene_19833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCCCAACTTTTCATA	NA	False	NA	NA	False	NA	NA	NA	120368972	120368712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120368700_120369000
ES.24172.1	chr4	+	210	1	Intergenic	novelGene_19835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATCATA	NA	False	NA	NA	False	NA	NA	NA	120419739	120419949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120419700_120419900
ES.24173.1	chr4	-	3632	2	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	3470	2347	intron_retention	FALSE	non_canonical	0	0	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTGGGGTTCCAGGAA	NA	False	NA	NA	False	AAGAAA	-9	NA	120398794	120394717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120395341_120395785
ES.24173.10	chr4	-	2714	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.014680765515	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427462	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397872_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.11	chr4	-	5833	17	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	49	0	intron_retention	FALSE	canonical	3	663	junction_7	49.1851968965257	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427424	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120404566_120405251_120405347_120406660_120406750_120410076_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.12	chr4	-	10018	14	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	67	0	intron_retention	FALSE	canonical	3	663	junction_5	57.983572454241	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427406	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120399205_120399727_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120410210_120411142_120411295_120415475_120415557_120415982_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.13	chr4	-	5003	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	300	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	184.474194387892	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427173	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120424749
ES.24173.14	chr4	-	5934	17	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	196.355186778959	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427472	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.17	chr4	-	5996	18	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-17	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	256.342574635846	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427490	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404567_120405251_120405347_120406660_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422518_120422637_120424446_120424625_120427347
ES.24173.18	chr4	-	6025	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	6	-1	intron_retention	FALSE	canonical	3	663	junction_8	52.7869649423044	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427467	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.19	chr4	-	2668	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	185.670099376472	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427490	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422518_120422637_120424446_120424625_120427347
ES.24173.2	chr4	-	2725	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-18	-2	-18	2	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTTTCTCTTGTCAC	NA	False	NA	-16	True	AATAAA	-16	NA	120427491	120397062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.20	chr4	-	4904	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	44	-1	intron_retention	FALSE	canonical	3	663	junction_7	51.1297284849831	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427429	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.22	chr4	-	5153	16	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-17	-1	intron_retention	FALSE	canonical	2	22	junction_15	196.74003151367	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427490	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120418712_120419974_120420076_120422465_120422637_120427347
ES.24173.23	chr4	-	3969	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	49	-1	intron_retention	FALSE	canonical	3	663	junction_8	53.4273105129813	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427424	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.24	chr4	-	2526	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	22	junction_17	184.81942931761	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427473	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120427347
ES.24173.26	chr4	-	3431	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	336	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	245.847017823767	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427137	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404554_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
ES.24173.27	chr4	-	2573	17	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	197.190887451094	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427495	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.28	chr4	-	3124	16	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_9	200.207625562398	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427482	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120399205_120399727_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.29	chr4	-	3469	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	303	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	291.84828736778	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGCTTTCTCTTGT	NA	False	NA	-19	True	AATAAA	-13	NA	120427170	120397065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402225_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419970_120420076_120422465_120422637_120424446_120424625_120426272
ES.24173.3	chr4	-	2943	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	302	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	245.724583604601	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTTTCTCTTGTCAC	NA	False	NA	-16	True	AATAAA	-16	NA	120427171	120397062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419989_120420076_120422465_120422637_120424446_120424625_120426794
ES.24173.30	chr4	-	5016	18	ISM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	410	2	410	-2	3prime_fragment	FALSE	canonical	3	663	junction_8	50.4764839556595	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTGTGCTTTCTCTTG	NA	False	NA	-20	True	AATAAA	-12	NA	120427063	120397066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ES.24173.33	chr4	-	2768	20	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	309	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	242.993656084901	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTGGTGTGCTTTCTC	NA	False	NA	-23	True	AATAAA	-9	NA	120427164	120397069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120424749_120424847_120427067
ES.24173.34	chr4	-	2456	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-32	281	-32	-281	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGTCTCTGGCTACAC	NA	False	NA	-13	True	TATAAA	-15	NA	120427505	120397345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.35	chr4	-	4716	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	304	-283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	184.474194387892	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGGGTCTCTGGCTAC	NA	False	NA	-15	True	TATAAA	-13	NA	120427169	120397347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120424749
ES.24173.36	chr4	-	4959	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-10	-284	intron_retention	FALSE	canonical	3	663	junction_8	52.9063938025482	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCGGGTCTCTGGCTA	NA	False	NA	-16	True	TATAAA	-12	NA	120427483	120397348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.37	chr4	-	2334	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-15	-285	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	189.418633415831	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCCGGGTCTCTGGCT	NA	False	NA	-17	True	TATAAA	-11	NA	120427488	120397349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120422465_120422637_120424446_120424625_120427347
ES.24173.42	chr4	-	2733	20	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	336	-286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	242.993656084901	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCCGGGTCTCTGGC	NA	False	NA	-18	True	TATAAA	-10	NA	120427137	120397350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120424749_120424847_120426794
ES.24173.43	chr4	-	3084	18	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	309	-286	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	249.878807995238	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCCGGGTCTCTGGC	NA	False	NA	-18	True	TATAAA	-10	NA	120427164	120397350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120422465_120422637_120424446_120424625_120426272
ES.24173.45	chr4	-	2878	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	304	-598	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_18	179.180610999139	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGCAGTTTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	120427169	120397662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
ES.24173.46	chr4	-	2137	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	-32	600	-32	-600	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTTTGCAGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	120427505	120397664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.47	chr4	-	2533	2	ISM	ENSMUSG00000028633.8	ENSMUST00000140891.2	525	6	-766	3680	-766	-3680	5prime_fragment	FALSE	canonical	3	663	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGTAAGATGATTTTGGT	NA	False	NA	NA	False	AAAAAG	-4	NA	120406064	120402845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_120404566_120405251
ES.24173.48	chr4	-	131	1	Intergenic	novelGene_19834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	120413906	120413775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120413800_120413900
ES.24173.5	chr4	-	3490	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	292	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_18	179.180610999139	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCTTTCTCTTGTCAC	NA	False	NA	-16	True	AATAAA	-16	NA	120427181	120397062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
ES.24173.7	chr4	-	2736	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	251.037138809636	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGCTTTCTCTTGTCA	NA	False	NA	-17	True	AATAAA	-15	NA	120427477	120397063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404562_120405251_120405377_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ES.24173.9	chr4	-	2560	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	44	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	189.418633415831	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427429	120397064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120422465_120422637_120424446_120424625_120427347
ES.24174.1	chr4	-	172	1	Intergenic	novelGene_19836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	120457532	120457360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120457400_120457500
ES.24175.1	chr4	+	156	1	Intergenic	novelGene_19837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8423	False	NA	NA	False	NA	NA	NA	120491723	120491879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120491700_120491900
ES.24176.1	chr4	+	1249	1	FSM	ENSMUSG00000070803.7	ENSMUST00000094814.6	1249	1	-2	2	-2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAGTTTCCATTTCC	6117	False	NA	7	True	AATAAA	-16	NA	120523766	120525015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120523800_120525000
ES.24177.1	chr4	+	189	1	Intergenic	novelGene_19838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAATAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	120528975	120529164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120529000_120529200
ES.24178.1	chr4	-	160	1	Intergenic	novelGene_19839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	120548367	120548207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120548200_120548400
ES.24179.1	chr4	-	4151	14	FSM	ENSMUSG00000028631.8	ENSMUST00000030376.8	3919	14	-228	-4	-228	4	multi-exon	TRUE	canonical	0	0	junction_9	1.49159380228195	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTTGGTTGTGCTCGG	9203	False	NA	NA	False	ATTAAA	-19	NA	120604673	120553330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120568419_120568582_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ES.2418.1	chr10	-	268	1	Intergenic	novelGene_1841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATATATTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	20019121	20018853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20018900_20019100
ES.24180.1	chr4	+	177	1	Intergenic	novelGene_19840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	120660588	120660765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120660600_120660800
ES.24181.1	chr4	+	3225	1	Intergenic	novelGene_19841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120664163	120667388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120664200_120667400
ES.24181.2	chr4	+	3475	1	Intergenic	novelGene_19842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGTTTGGAATCACAG	NA	False	NA	NA	False	NA	NA	NA	120664163	120667638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120664200_120667600
ES.24182.1	chr4	+	1493	1	Intergenic	novelGene_19843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAAGTCAGATTATTTT	6861	False	NA	NA	False	NA	NA	NA	120674026	120675519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120674000_120675500
ES.24183.1	chr4	-	2210	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	16	-294	-6	294	multi-exon	TRUE	canonical	3	393	junction_8	23.5424491839793	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCTTCGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	120682887	120614340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.10	chr4	-	1865	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	140.402768847341	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682897	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.12	chr4	-	1780	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	141.70297941469	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682865	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120682726
ES.24183.13	chr4	-	5289	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	393	junction_7	13.7658998979362	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682908	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.14	chr4	-	1903	10	NNC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170.418077056556	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATCTGTGTCTGGGACA	NA	False	NA	-3	True	AATAAA	-18	NA	120682885	120614636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618828_120618933_120622410_120622557_120625914_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.15	chr4	-	2015	10	NNC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-65	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	133.1523772058	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682969	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682706
ES.24183.16	chr4	-	1795	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	139.781749524035	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682865	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.17	chr4	-	8032	9	NNC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	82	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	137.028053697044	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682799	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120619682_120620305_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.19	chr4	-	2072	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	478	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	131.604720542752	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682403	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682083
ES.24183.2	chr4	-	1968	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-35	-1	-34	1	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTCTGGGACATTC	NA	False	NA	0	True	AATAAA	-21	NA	120682938	120614633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.20	chr4	-	2036	10	FSM	ENSMUSG00000032897.18	ENSMUST00000120779.8	2006	10	-33	3	-33	-3	multi-exon	FALSE	canonical	0	0	junction_9	134.081235740792	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120672942	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ES.24183.21	chr4	-	3216	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	527	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.081235740792	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120682354	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120680890
ES.24183.22	chr4	-	6434	8	NIC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	-43	-3	intron_retention	FALSE	canonical	0	0	junction_7	145.224948663395	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATCTGTGTCTGGGAC	NA	False	NA	-4	True	AATAAA	-17	NA	120672952	120614637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120616589_120618824_120618933_120622410_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ES.24183.24	chr4	-	5404	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	393	junction_7	24.5305931440722	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGAGAATCTGTGTCT	NA	False	NA	-9	True	AATAAA	-12	NA	120682905	120614642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.25	chr4	-	1669	7	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-44	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	162.118697941423	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTTGAGAATCTGTGTC	NA	False	NA	-10	True	AATAAA	-11	NA	120682948	120614643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120682726
ES.24183.26	chr4	-	1819	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	484	-61	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	130.985815837507	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTTGCTGCATGGACTCC	NA	False	NA	-62	True	ATTAAA	-14	NA	120682397	120614695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682272
ES.24183.27	chr4	-	1641	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	484	88	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	131.604720542752	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAATTCTCTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	120682397	120615062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682083
ES.24183.28	chr4	-	1525	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	-34	441	-33	75	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTGTGGTTGAAGAAAT	NA	False	NA	NA	False	ATTAAA	-25	NA	120682937	120615075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.3	chr4	-	1500	6	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	16	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	173.662891833575	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTCTGGGACATTC	NA	False	NA	0	True	AATAAA	-21	NA	120682865	120614633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120682726
ES.24183.30	chr4	-	1514	10	NNC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-4	73	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	133.1523772058	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGTGTGGTTGAAGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	120682908	120615077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682706
ES.24183.6	chr4	-	2958	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	393	junction_7	24.8139955468683	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682895	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ES.24183.7	chr4	-	1811	8	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-65	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	146.72367475869	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682969	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120647573_120647687_120682726
ES.24183.8	chr4	-	1840	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	133.008399640775	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682884	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120647573_120647687_120682726
ES.24183.9	chr4	-	1938	10	NNC	ENSMUSG00000032897.18	novel	2006	10	NA	NA	476	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.081235740792	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTCTGGGACAT	NA	False	NA	-2	True	AATAAA	-19	NA	120682405	120614635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682221
ES.24184.1	chr4	+	168	1	Intergenic	novelGene_19844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATTGGCATAAA	NA	False	NA	NA	False	NA	NA	NA	120683456	120683624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120683500_120683600
ES.24185.1	chr4	+	6536	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-28	-3	-25	3	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTCTGAGGATGTT	NA	False	NA	19	True	AATAAA	-24	NA	120711987	120753779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.10	chr4	+	2078	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	22	-1	19	1	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACAACTTTTTCCTCCA	NA	False	NA	NA	False	NA	NA	NA	120712034	120741642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
ES.24185.12	chr4	+	2317	4	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	8549	-1183	8549	1183	3prime_fragment	FALSE	canonical	3	28	junction_2	4.18993502999218	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGGCTCTGGACTGCT	NA	False	NA	NA	False	NA	NA	NA	120743614	120749940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.13	chr4	+	1466	1	NIC	ENSMUSG00000032890.18	novel	6505	8	NA	NA	13423	1197	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCATCTGTTCTCCC	NA	False	NA	NA	False	NA	NA	NA	120748488	120749954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120748500_120750000
ES.24185.2	chr4	+	1858	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	-21	4668	-18	351	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTTGTCTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	120711994	120749108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.3	chr4	+	1541	8	NNC	ENSMUSG00000032890.18	novel	6505	8	NA	NA	-11	230	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7135922166671	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGCATCGTATGGACA	NA	False	NA	NA	False	NA	NA	NA	120712001	120748987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120712131_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.4	chr4	+	10212	7	NIC	ENSMUSG00000032890.18	novel	6505	8	NA	NA	5	-5	intron_retention	FALSE	canonical	3	28	junction_5	7.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGTATGGCTTTCTG	NA	False	NA	11	True	AATAAA	-16	NA	120712020	120753771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.5	chr4	+	6450	8	NNC	ENSMUSG00000032890.18	novel	6505	8	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8300671419788	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATGGCTTTCTGA	NA	False	NA	12	True	AATAAA	-17	NA	120712028	120753772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120712320_120729707_120729848_120735034_120735283_120740271_120740410_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.6	chr4	+	1836	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	21	242	18	-242	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACCTGTACACATCCT	NA	False	NA	NA	False	NA	NA	NA	120712033	120741399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
ES.24185.7	chr4	+	1715	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	18	4772	18	247	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCTTGCCCATGGAAT	NA	False	NA	NA	False	NA	NA	NA	120712033	120749004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.8	chr4	+	6148	7	NNC	ENSMUSG00000032890.18	novel	6505	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4183525025881	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGGCTTTCTGAGGAT	NA	False	NA	16	True	AATAAA	-21	NA	120712034	120753776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120712297_120735175_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24185.9	chr4	+	1935	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	19	4551	19	468	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCACACTGGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	120712034	120749225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ES.24186.1	chr4	-	200	1	Intergenic	novelGene_19845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTACCCAGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	120755301	120755101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120755100_120755300
ES.24187.1	chr4	+	170	1	Intergenic	novelGene_19846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGATGTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	120761218	120761388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120761200_120761400
ES.24188.1	chr4	-	823	3	NNC	ENSMUSG00000028629.10	novel	1996	2	NA	NA	-2	19315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATTGCATTCTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	120782204	120759077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120759250_120772333_120772488_120781707
ES.24188.2	chr4	-	2009	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	-11	-2	1	2	multi-exon	FALSE	canonical	3	95	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGATGTTTGTGTGTT	NA	False	NA	-7	True	AATAAA	-24	NA	120782213	120778390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120779894_120781707
ES.24188.3	chr4	-	1980	2	FSM	ENSMUSG00000028629.10	ENSMUST00000177880.2	1969	2	-11	0	1	0	multi-exon	FALSE	canonical	3	24	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTGACTTGATGTT	NA	False	NA	-15	True	AATAAA	-16	NA	120782213	120778398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120779873_120781707
ES.24189.1	chr4	-	3936	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	-52	-1522	-52	1522	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGGTGTACCACTAT	6784	False	NA	NA	False	AGTAAA	-17	NA	120808948	120785811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
ES.24189.2	chr4	-	2393	6	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	-27	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.3476589707709	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACAGATTAGTATTTGG	6809	False	NA	NA	False	NA	NA	NA	120808923	120787326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804485_120804767_120806528_120806758_120808640
ES.24189.3	chr4	-	2320	6	NNC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.91758912354	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTACAGATTAGTAT	6800	False	NA	NA	False	NA	NA	NA	120808932	120787330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804563_120804767_120806528_120806758_120808640
ES.24189.6	chr4	-	1712	1	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	2835	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCACTGATTTACAGAT	8776	False	NA	NA	False	NA	NA	NA	120789048	120787336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120787300_120789000
ES.24189.7	chr4	-	2282	6	NIC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	-35	104	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	13.3476589707709	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTACTACTGTCTGAC	6801	False	NA	NA	False	AATAAA	-7	NA	120808931	120787445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120788704_120791529_120791626_120792263_120792391_120804485_120804767_120806528_120806758_120808640
ES.24189.8	chr4	-	889	4	NNC	ENSMUSG00000064141.15	novel	2362	6	NA	NA	60	-3626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.9241115365405	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATCCTTGTTTGCTTG	6896	False	NA	NA	False	NA	NA	NA	120808836	120792129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120792391_120804563_120804767_120806528_120806758_120808640
ES.2419.1	chr10	+	4525	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	-206	-67	-206	-1	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTCCTGTGGTTTCACT	NA	False	NA	14	True	AATAAA	-23	NA	20024010	20157335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.12	chr10	+	2003	7	NNC	ENSMUSG00000019996.18	novel	1008	7	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	110.886453435736	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGATGTATCTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	20024690	20127637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20126340
ES.2419.13	chr10	+	3360	11	ISM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	474	10118	-39	2006	5prime_fragment	FALSE	canonical	3	237	junction_6	27.5914841934971	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGTCCTAAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	20024690	20147150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105
ES.2419.14	chr10	+	8336	17	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-39	-3	intron_retention	FALSE	canonical	3	234	junction_10	29.5591964327517	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTCTATTTATTTA	NA	False	NA	11	True	ATTAAA	-16	NA	20024690	20157265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.17	chr10	+	3652	17	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-32	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	73.8609335169818	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTGTTCTATTTATT	NA	False	NA	9	True	ATTAAA	-14	NA	20024697	20157263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.2	chr10	+	2084	11	ISM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	410	11458	-103	666	5prime_fragment	FALSE	canonical	3	237	junction_6	27.5914841934971	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTCCCTTCAGCTTG	NA	False	NA	NA	False	AATATA	-14	NA	20024626	20145810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105
ES.2419.20	chr10	+	10613	15	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	234	junction_9	31.2409987036266	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20024723	20157268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20137730_20142481_20142598_20142868_20145335_20149025_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.21	chr10	+	4065	17	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	234	junction_11	29.9467626589253	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20024727	20157268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.22	chr10	+	2488	11	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	1	-500	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	89.0985970708855	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCCAGCCAGAGTCCT	NA	False	NA	NA	False	AATAAA	-27	NA	20024730	20144644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20143431
ES.2419.23	chr10	+	3835	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	70.4666109061246	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTTCCTGTGGTTTCAC	NA	False	NA	13	True	AATAAA	-22	NA	20024731	20157334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133076_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.24	chr10	+	3251	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	515	486	2	-486	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAAGAATTTGGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	20024731	20156782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.25	chr10	+	3568	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	516	168	3	-168	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATGTGAGACTATTT	NA	False	NA	NA	False	NA	NA	NA	20024732	20157100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.26	chr10	+	3726	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.1446209732374	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTCTATTTATTTA	NA	False	NA	11	True	ATTAAA	-16	NA	20024733	20157265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106535_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.27	chr10	+	6246	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	5	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.025653570777	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATGTGAGACTATTT	NA	False	NA	NA	False	NA	NA	NA	20024734	20157100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20125150_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153878_20154092_20155741
ES.2419.3	chr10	+	4146	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	413	-307	-100	239	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTAAGTTGTCTTTT	NA	False	NA	NA	False	TTTAAA	-20	NA	20024629	20157575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.30	chr10	+	3811	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	71.6832227865471	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTTCCTGTGGTTTCAC	NA	False	NA	13	True	AATAAA	-22	NA	20024744	20157334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126094_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.31	chr10	+	3807	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.382800037737	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTTCCTGTGGTTTCAC	NA	False	NA	13	True	AATAAA	-22	NA	20024746	20157334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126094_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151924_20152031_20153878_20154092_20155741
ES.2419.32	chr10	+	3844	19	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.1020944984591	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	NA	False	NA	9	True	AATAAA	-18	NA	20024761	20157330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20109467_20109543_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.33	chr10	+	5496	2	Intergenic	novelGene_1843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	331	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGAATTTTTTTTCGGAT	NA	False	NA	NA	False	AATAAA	-1	NA	20030767	20036428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20036097_20036261
ES.2419.34	chr10	+	3848	19	NNC	ENSMUSG00000019996.18	novel	628	4	NA	NA	-9671	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.6773057799024	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20036854	20157268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20036971_20037307_20037398_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.35	chr10	+	4106	18	NNC	ENSMUSG00000019996.18	novel	628	4	NA	NA	-9597	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.1446209732374	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTGTTCTATTTATT	NA	False	NA	9	True	ATTAAA	-14	NA	20036928	20157263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20037398_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.36	chr10	+	3957	1	Intergenic	novelGene_1844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAATAACTTTTTTT	NA	False	NA	NA	False	ATTAAA	-5	NA	20041670	20045627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20041700_20045600
ES.2419.37	chr10	+	3687	18	NNC	ENSMUSG00000019996.18	novel	628	4	NA	NA	14880	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.1446209732374	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTCTATTTATTTA	NA	False	NA	11	True	ATTAAA	-16	NA	20062632	20157265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20062681_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.39	chr10	+	1988	1	Intergenic	novelGene_1845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGGGCAGATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20092964	20094952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20093000_20095000
ES.2419.4	chr10	+	3795	18	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-95	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	70.6095556037606	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAACTTGTTCTATTTAT	NA	False	NA	8	True	ATTAAA	-13	NA	20024634	20157262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151954_20152022_20153870_20154092_20155741
ES.2419.40	chr10	+	5079	2	Intergenic	novelGene_1846	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTGTGGAGCCATTTT	NA	False	NA	NA	False	AAAAAG	-43	NA	20093512	20098631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20097193_20097232
ES.2419.43	chr10	+	5199	1	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-15073	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATGATGTATCTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	20122437	20127636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20122400_20127600
ES.2419.44	chr10	+	4139	12	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-12027	0	intron_retention	FALSE	canonical	3	234	junction_6	30.2091880281863	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20125483	20157268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.45	chr10	+	5005	10	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-1629	0	intron_retention	FALSE	canonical	3	234	junction_4	29.7097066068763	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20135881	20157268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.46	chr10	+	2622	6	NIC	ENSMUSG00000019996.18	novel	3831	18	NA	NA	3777	-6	intron_retention	FALSE	canonical	3	250	junction_1	28.1822639260937	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	27	False	NA	9	True	AATAAA	-18	NA	20149023	20157330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.47	chr10	+	5481	2	ISM	ENSMUSG00000019996.18	ENSMUST00000116259.5	3831	18	126880	-1603	6363	1603	intron_retention	FALSE	canonical	3	312	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAGCCAGTAAGTTC	2613	False	NA	NA	False	NA	NA	NA	20151609	20158939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20152022_20153870
ES.2419.5	chr10	+	2685	11	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-94	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.6324445218157	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	NA	False	NA	9	True	AATAAA	-18	NA	20024635	20157330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121088_20149076_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.6	chr10	+	3751	19	NNC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	-88	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	70.4563607166315	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAACTTGTTCTATTTAT	NA	False	NA	8	True	ATTAAA	-13	NA	20024641	20157262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741_20155879_20155948
ES.2419.8	chr10	+	2454	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	426	1372	-87	-1372	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGTAGCTTTCCTGA	NA	False	NA	7	True	ATTAAA	-17	NA	20024642	20155896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ES.2419.9	chr10	+	1878	11	ISM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	427	11647	-86	477	5prime_fragment	FALSE	canonical	3	237	junction_6	27.5914841934971	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCCCCTTCTGTTCT	NA	False	NA	NA	False	TTTAAA	-42	NA	20024643	20145621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105
ES.24190.1	chr4	+	220	1	Intergenic	novelGene_19849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGTTACTAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	120865153	120865373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120865200_120865400
ES.24191.1	chr4	+	612	2	Intergenic	novelGene_19850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGTCTGCCATTTTCC	NA	False	NA	NA	False	NA	NA	NA	120874960	120878168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120875137_120877732
ES.24192.1	chr4	+	194	1	Intergenic	novelGene_19851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTCTGTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	120888505	120888699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120888500_120888700
ES.24193.1	chr4	+	4095	29	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	181	-5	intron_retention	FALSE	canonical	0	0	junction_25	13.2716899866611	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGACTTCTTGTGGA	NA	False	NA	16	True	AATAAA	-17	NA	120896762	120912514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910369_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.10	chr4	+	3163	30	ISM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	2194	-1	1831	1	3prime_fragment	FALSE	canonical	3	40	junction_15	8.24000854276135	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCTTGTGGATGAGGA	NA	False	NA	22	True	AATAAA	-23	NA	120898775	120912520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.11	chr4	+	2464	28	NNC	ENSMUSG00000028626.6	novel	752	5	NA	NA	3320	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.200054038215	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGACTTCTTGTGGA	NA	False	NA	16	True	AATAAA	-17	NA	120900264	120912514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120900440_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.12	chr4	+	1931	12	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-1996	-3	intron_retention	FALSE	canonical	3	51	junction_1	7.52077013816234	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTTGTGGATG	NA	False	NA	18	True	AATAAA	-19	NA	120908199	120912516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.13	chr4	+	1278	7	ISM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	13367	-3	-247	3	3prime_fragment	FALSE	canonical	3	61	junction_1	5.20949986936259	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTGGATGAGGATG	NA	False	NA	24	True	AATAAA	-25	NA	120909948	120912522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.2	chr4	+	2715	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	212	-3	-151	3	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTGGATGAGGATG	NA	False	NA	24	True	AATAAA	-25	NA	120896793	120912522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.3	chr4	+	2534	31	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-146	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	11.9436175424366	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGACTTCTTGTGGA	NA	False	NA	16	True	AATAAA	-17	NA	120896798	120912514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120911428_120911528_120911792
ES.24193.5	chr4	+	2690	31	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-137	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.1324872823933	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTTGTGGATG	NA	False	NA	18	True	AATAAA	-19	NA	120896807	120912516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901452_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.6	chr4	+	3467	29	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-137	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	16.6161266023495	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGACTTCTTGTGGA	NA	False	NA	16	True	AATAAA	-17	NA	120896807	120912514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898150_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901317_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.7	chr4	+	2793	32	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-136	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.9302941886243	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGACTTCTTGTGGA	NA	False	NA	16	True	AATAAA	-17	NA	120896808	120912514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901317_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.8	chr4	+	5487	29	NIC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-131	3	intron_retention	FALSE	canonical	3	42	junction_1	7.84438899950214	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTGGATGAGGATG	NA	False	NA	24	True	AATAAA	-25	NA	120896813	120912522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24193.9	chr4	+	3601	31	NNC	ENSMUSG00000028626.6	novel	2924	32	NA	NA	-94	-3	intron_retention	FALSE	canonical	0	0	junction_8	13.1182654679988	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTTCTTGTGGATG	NA	False	NA	18	True	AATAAA	-19	NA	120896850	120912516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901670_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ES.24194.1	chr4	+	175	1	Intergenic	novelGene_19853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAATTAAAA	3711	False	NA	NA	False	NA	NA	NA	120928855	120929030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_120928900_120929000
ES.24195.1	chr4	-	2953	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	-45	-3	-45	3	multi-exon	TRUE	canonical	3	186	junction_3	19.2841007882109	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGCTGTCACTGTGTTA	NA	False	NA	1	True	AATAAA	-24	NA	120874489	120825510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ES.24195.10	chr4	-	3446	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	-16	-1	-16	1	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGTGTTGGGTTTGAT	NA	False	NA	0	True	ATTAAA	-21	NA	120955454	120916432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.11	chr4	-	3353	11	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.5	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955280	120916433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120932703_120932786_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.12	chr4	-	3086	9	NIC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	225	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	92.6295545438927	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955213	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120944505_120944593_120952748_120952896_120955073
ES.24195.13	chr4	-	5321	4	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	20680	1	177	-1	3prime_fragment	FALSE	canonical	3	242	junction_3	12.2836838484589	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120934758	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669
ES.24195.14	chr4	-	3257	10	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	85.3971115826915	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955406	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955212
ES.24195.16	chr4	-	3487	11	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	110.505248744121	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955392	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120946053_120946159_120952748_120952896_120955073
ES.24195.18	chr4	-	3536	11	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.917405122114	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955395	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120919694_120919846_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.19	chr4	-	3409	10	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.566342406631	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955441	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918396_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.2	chr4	-	2873	10	NNC	ENSMUSG00000032870.9	novel	2905	10	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	70.9350250424836	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGCTCGGCTGTCAC	NA	False	NA	-6	True	AATAAA	-17	NA	120874422	120825517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832645_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ES.24195.20	chr4	-	3327	11	NIC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	158	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	109.30969764847	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTGGTGTTGGGTTTG	NA	False	NA	-2	True	ATTAAA	-19	NA	120955280	120916434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120946053_120946111_120952748_120952896_120955073
ES.24195.21	chr4	-	3274	10	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	174	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.5954605592533	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACGTCCTGGTGTTGGG	NA	False	NA	-6	True	ATTAAA	-15	NA	120955264	120916438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938535_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.22	chr4	-	3181	9	NNC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	46	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.8681449187502	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTACGTCCTGGTG	NA	False	NA	-11	True	ATTAAA	-10	NA	120955392	120916443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120940067_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.23	chr4	-	1949	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	216	1264	216	-1264	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTACTGAAATGAGTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	120955222	120917697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.24	chr4	-	1882	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	-7	1554	-7	-1554	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATAGTTTTATCTAGT	NA	False	NA	56	True	GATAAA	-22	NA	120955445	120917987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.25	chr4	-	1913	11	NIC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	9	-1564	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	109.30969764847	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTTTTAAAGCATAGT	NA	False	NA	46	True	GATAAA	-12	NA	120955429	120917997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120946053_120946111_120952748_120952896_120955073
ES.24195.26	chr4	-	1472	9	NIC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	171	-1633	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	95.7545690815848	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTATCTCATTTCAAAA	NA	False	NA	-23	True	CATAAA	-19	NA	120955267	120918066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ES.24195.27	chr4	-	187	1	Intergenic	novelGene_19854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTATAAGTGC	9324	False	NA	NA	False	NA	NA	NA	120970771	120970584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120970600_120970800
ES.24195.28	chr4	-	210	1	Intergenic	novelGene_19855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAACAAAAAA	8630	False	NA	NA	False	AAAAAG	-17	NA	120971465	120971255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120971300_120971500
ES.24195.5	chr4	-	2789	11	NNC	ENSMUSG00000032870.9	novel	2905	10	NA	NA	41	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.878494385188	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACCCTTTTTGCTCGGC	NA	False	NA	-12	True	AATAAA	-11	NA	120874403	120825523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_120826711_120826775_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ES.24195.6	chr4	-	1746	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	-35	1194	-35	-1194	multi-exon	FALSE	canonical	3	186	junction_3	19.2841007882109	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACCCTTGCTTTCCT	NA	False	NA	-6	True	AATAAA	-28	NA	120874479	120826707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ES.24195.7	chr4	-	206	1	Intergenic	novelGene_19847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATAAGGATGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	120856060	120855854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120855900_120856100
ES.24195.8	chr4	-	172	2	Intergenic	novelGene_19848	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8632	False	NA	NA	False	NA	NA	NA	120971463	120855880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120856017_120971427
ES.24195.9	chr4	-	259	1	Intergenic	novelGene_19852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACTGTTAAAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	120894230	120893971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_120894000_120894200
ES.24196.1	chr4	+	5087	2	Antisense	novelGene_ENSMUSG00000049878.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGAAGCTATAGCCAGA	4248	False	NA	NA	False	NA	NA	NA	121020334	121025957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_121023990_121024525
ES.24197.1	chr4	+	5386	1	Intergenic	novelGene_19856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTAGCCAGTGTCAG	6559	False	NA	NA	False	NA	NA	NA	121048324	121053710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_121048300_121053700
ES.24198.1	chr4	-	4879	1	Genic_Genomic	ENSMUSG00000049878.14	novel	NA	NA	NA	NA	42741	4458	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGCCATTATGAAAATA	5727	False	NA	NA	False	NA	NA	NA	121002990	120998111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_120998100_121003000
ES.24198.10	chr4	-	9319	8	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5136661475621	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6465	False	NA	-2	True	AATAAA	-17	NA	121072280	121003080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121008973_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.11	chr4	-	6217	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	64.4689847911381	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6429	False	NA	-2	True	AATAAA	-17	NA	121072316	121003080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031_121072199_121072257
ES.24198.12	chr4	-	5870	5	NIC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	72.2789734293453	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTTACTCATAGAGT	6464	False	NA	-3	True	AATAAA	-16	NA	121072281	121003081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121072031
ES.24198.13	chr4	-	8045	7	NIC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	142	junction_1	24.9760996866115	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGTTTACTCATAGAG	6465	False	NA	-4	True	AATAAA	-15	NA	121072280	121003082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121047456_121072031
ES.24198.14	chr4	-	6401	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	87.0933407328023	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGTTTACTCATAGAG	6441	False	NA	-4	True	AATAAA	-15	NA	121072304	121003082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047296_121047456_121067302_121067438_121072031
ES.24198.15	chr4	-	6384	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.3763440749214	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGTTTACTCATAGAG	6465	False	NA	-4	True	AATAAA	-15	NA	121072280	121003082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121046166_121046313_121047300_121047456_121072031
ES.24198.16	chr4	-	6092	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-32	182	-32	-182	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTGCATGATTGTATA	6432	False	NA	55	True	AATATA	-22	NA	121072313	121003261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.17	chr4	-	6126	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-32	-237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.2361099523518	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTTGGTGCTAATTA	6432	False	NA	0	True	NA	NA	NA	121072313	121003316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121028594_121028684_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.18	chr4	-	6091	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-10	-237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	82.6611116245118	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTTGGTGCTAATTA	6454	False	NA	0	True	NA	NA	NA	121072291	121003316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121026873_121026950_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.2	chr4	-	6377	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-13	-122	-13	122	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCCTGTCTTAATGTT	6451	False	NA	NA	False	ACTAAA	-18	NA	121072294	121002957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.20	chr4	-	5592	2	NNC	ENSMUSG00000049878.14	novel	6585	6	NA	NA	35445	-238	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGTTTGGTGCTAATT	6945	False	NA	-1	True	NA	NA	NA	121010286	121003317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121007494_121008870
ES.24198.21	chr4	-	6136	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	2	-239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.5164094699956	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTTTGGTGCTAAT	6466	False	NA	-2	True	NA	NA	NA	121072279	121003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121067302_121067438_121072031
ES.24198.22	chr4	-	5836	8	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-47	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.3756720402357	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTTTGGTGCTAAT	6417	False	NA	-2	True	NA	NA	NA	121072328	121003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121003434_121003492_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121072031
ES.24198.24	chr4	-	5665	5	NIC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-32	-239	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	72.2789734293453	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTTTGGTGCTAAT	6432	False	NA	-2	True	NA	NA	NA	121072313	121003318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121072031
ES.24198.25	chr4	-	1574	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	8	4660	8	-4660	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAGTCTAACAGATCA	6472	False	NA	NA	False	NA	NA	NA	121072273	121007739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.26	chr4	-	3757	8	NNC	ENSMUSG00000049878.14	novel	497	3	NA	NA	5	-6003	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.1735480451269	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATCTAATTCAGTCCTT	6469	False	NA	NA	False	AATATA	-17	NA	121072276	121009082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121011743_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.27	chr4	-	3349	7	ISM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	-44	6770	-44	-6770	5prime_fragment	FALSE	canonical	3	168	junction_3	17.3557547292598	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAGAAGGAAAGAATATG	6420	False	NA	NA	False	NA	NA	NA	121072325	121009849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.28	chr4	-	730	3	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-22	-6800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6442	False	NA	NA	False	NA	NA	NA	121072303	121009879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121009936_121047053_121047456_121072031
ES.24198.29	chr4	-	5072	6	NIC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	8	-6802	intron_retention	FALSE	canonical	3	168	junction_3	19.0094713235271	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	6472	False	NA	NA	False	NA	NA	NA	121072273	121009881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121047456_121072031
ES.24198.30	chr4	-	3138	6	NIC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	2	-6802	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	77.1372802216931	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	6466	False	NA	NA	False	NA	NA	NA	121072279	121009881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121012195_121016388_121016526_121027814_121028018_121045411_121045494_121047300_121047456_121072031
ES.24198.31	chr4	-	4274	3	ISM	ENSMUSG00000049878.14	ENSMUST00000168615.8	6585	6	16092	7313	16092	-6803	internal_fragment	FALSE	canonical	3	178	junction_1	0.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121029639	121009882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_121012195_121016388_121016526_121027814
ES.24198.32	chr4	-	1477	6	ISM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	1	12791	1	12103	5prime_fragment	FALSE	canonical	3	168	junction_2	18.02664694279	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAACAAATATAT	6465	False	NA	NA	False	NA	NA	NA	121072280	121015870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.33	chr4	-	3311	1	NIC	ENSMUSG00000049878.14	novel	6585	6	NA	NA	26524	12077	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	121019207	121015896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121015900_121019200
ES.24198.34	chr4	-	2749	1	FSM	ENSMUSG00000049878.14	ENSMUST00000222814.2	2752	1	2	1	2	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6466	False	NA	NA	False	NA	NA	NA	121072279	121069530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_121069500_121072300
ES.24198.4	chr4	-	6165	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.6611116245118	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6463	False	NA	-1	True	AATAAA	-18	NA	121072282	121003079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121007570_121007656_121008220_121012052_121012195_121016388_121016526_121027805_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.5	chr4	-	8652	1	NIC	ENSMUSG00000049878.14	novel	6585	6	NA	NA	34000	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	5500	False	NA	-1	True	AATAAA	-18	NA	121011731	121003079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_121003100_121011700
ES.24198.6	chr4	-	6241	8	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.5136661475621	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6474	False	NA	-1	True	AATAAA	-18	NA	121072271	121003079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027805_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.7	chr4	-	6355	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.2361099523518	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6464	False	NA	-1	True	AATAAA	-18	NA	121072281	121003079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121032861_121032975_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24198.8	chr4	-	6172	8	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.7886407069402	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6467	False	NA	-2	True	AATAAA	-17	NA	121072278	121003080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121028594_121028684_121039802_121039936_121045411_121045494_121072031
ES.24198.9	chr4	-	6329	9	NNC	ENSMUSG00000049878.14	novel	6242	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.2361099523518	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTTACTCATAGAGTC	6465	False	NA	-2	True	AATAAA	-17	NA	121072280	121003080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121028594_121028684_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ES.24199.1	chr4	-	657	1	Intergenic	novelGene_19857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121243862	121243205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_121243200_121243900
ES.242.1	chr1	+	151	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAATAAAATAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34613192	34613343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34613200_34613300
ES.2420.1	chr10	-	3125	1	Intergenic	novelGene_1842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAACCAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	20033439	20030314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20030300_20033400
ES.24200.1	chr4	-	3268	2	Intergenic	novelGene_19858	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAACAAAATAAATAACAG	NA	False	NA	NA	False	NA	NA	NA	122607580	122604100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_122606584_122606795
ES.24201.1	chr4	+	2306	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	-11	86	-11	-86	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTATCATTTTCAGTA	NA	False	NA	17	True	AATAAA	-15	NA	122730023	122752785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.10	chr4	+	3169	4	NNC	ENSMUSG00000028657.15	novel	1191	6	NA	NA	1	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.596027074428	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTATCATTTTCAGTA	NA	False	NA	17	True	AATAAA	-15	NA	122730043	122752785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122730173_122737787_122737898_122738210_122738314_122749958
ES.24201.11	chr4	+	1368	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	11	1002	-1	-1002	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATTTCTTAAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	122730045	122751869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.12	chr4	+	913	1	NIC	ENSMUSG00000028657.15	novel	2381	9	NA	NA	21255	-657	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGCAATGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	122751301	122752214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122751300_122752200
ES.24201.2	chr4	+	1376	10	NNC	ENSMUSG00000028657.15	novel	2573	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	96.4254973708193	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122730037	122752968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302_122751759_122752857
ES.24201.3	chr4	+	2501	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	4	-124	0	27	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAAGGAAAGGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	122730038	122752995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.4	chr4	+	1994	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	5	382	1	-382	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGTTAAAGAAGAAACCA	NA	False	NA	NA	False	ATTAAA	-15	NA	122730039	122752489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.5	chr4	+	2279	9	NNC	ENSMUSG00000028657.15	novel	2381	9	NA	NA	1	-90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.94173752715	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTGGTATCATTTTC	NA	False	NA	13	True	AATAAA	-11	NA	122730039	122752781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122730173_122737794_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.6	chr4	+	4520	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	5	-2144	1	2047	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTGCTCTTAACTTG	NA	False	NA	NA	False	NA	NA	NA	122730039	122755015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.7	chr4	+	3501	4	ISM	ENSMUSG00000028657.15	ENSMUST00000121870.8	986	5	1	-125	1	125	intron_retention	FALSE	canonical	3	268	junction_2	18.2391520270726	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	122730039	122742893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763
ES.24201.8	chr4	+	1714	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	8	659	0	-659	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACAGCAATGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	122730042	122752212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ES.24201.9	chr4	+	1641	8	NIC	ENSMUSG00000028657.15	novel	2381	9	NA	NA	1	-659	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	105.777008419619	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTACAGCAATGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	122730043	122752212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122751302
ES.24202.1	chr4	-	4190	1	Antisense	novelGene_ENSMUSG00000028657.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCCAAGCTTTAATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	122745383	122741193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_122741200_122745400
ES.24203.1	chr4	-	2770	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	-30	-3	-18	3	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATGTTTTCAGTACAG	NA	False	NA	-4	True	AATAAA	-28	NA	122779867	122752836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ES.24203.10	chr4	-	4038	12	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	18	-8	intron_retention	FALSE	canonical	3	217	junction_11	216.708853701752	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779635	122752847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ES.24203.12	chr4	-	2493	4	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	887	-9	intron_retention	FALSE	canonical	3	810	junction_3	72.3924489616608	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGTTATTCACCTGATG	NA	False	NA	-16	True	AATAAA	-16	NA	122757538	122752848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_122754011_122755726_122755871_122756197_122756540_122756693
ES.24203.15	chr4	-	2531	13	NNC	ENSMUSG00000028656.15	novel	2768	13	NA	NA	-6	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	293.060526550783	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTAGTTATTCACCTG	NA	False	NA	-19	True	AATAAA	-13	NA	122779663	122752851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761551_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ES.24203.16	chr4	-	2630	14	NNC	ENSMUSG00000028656.15	novel	2768	13	NA	NA	6	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	340.582671627635	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTAGTTATTCACCTG	NA	False	NA	-19	True	AATAAA	-13	NA	122779647	122752851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122776497_122776574_122779606
ES.24203.17	chr4	-	2510	13	NNC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	-10	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	325.185459904549	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122779667	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761551_122763486_122763565_122765189_122765291_122766124_122766247_122779625
ES.24203.18	chr4	-	2477	14	NNC	ENSMUSG00000028656.15	novel	2737	13	NA	NA	3	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	297.571333002445	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122779650	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122752956_122753013_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ES.24203.19	chr4	-	4565	13	NNC	ENSMUSG00000028656.15	novel	2768	13	NA	NA	4	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.837677877172	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122779649	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755722_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122760908_122761108_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ES.24203.22	chr4	-	2599	13	NNC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	381.668122267967	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122779703	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758958_122759069_122761277_122761364_122761454_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ES.24203.23	chr4	-	2753	14	NNC	ENSMUSG00000028656.15	novel	2737	13	NA	NA	-23	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	395.823940301716	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122779680	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758958_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122776389_122776574_122779625
ES.24203.24	chr4	-	1808	7	NNC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	-7773	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	362.151173161461	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTAGTTATTCAC	NA	False	NA	-22	True	AATAAA	-10	NA	122766198	122752854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756820_122765189_122765291_122766124
ES.24203.27	chr4	-	2342	12	NIC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	26	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	329.915215755165	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTGTTTAGTTATTCA	NA	False	NA	-23	True	AATAAA	-9	NA	122779627	122752855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ES.24203.30	chr4	-	1535	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	39	1046	-8	-1046	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATCTGTATGGAGACG	NA	False	NA	NA	False	AATACA	-33	NA	122779665	122753885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ES.24203.31	chr4	-	2340	2	NIC	ENSMUSG00000028656.15	novel	635	6	NA	NA	0	887	intron_retention	FALSE	canonical	3	137	junction_1	0	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGCCTGGGCTACACT	NA	False	NA	NA	False	AGTAAA	-15	NA	122779657	122763938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_122766247_122779625
ES.24203.4	chr4	-	2784	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	-17	1	-17	-1	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACCTGATGTTTTCAGT	NA	False	NA	-8	True	AATAAA	-24	NA	122779866	122752840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ES.24203.7	chr4	-	2529	13	NNC	ENSMUSG00000028656.15	novel	2737	13	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	299.816286341412	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779655	122752847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765273_122766124_122766250_122779625
ES.24203.8	chr4	-	2744	14	NNC	ENSMUSG00000028656.15	novel	2620	13	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	340.582671627635	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATTCACCTGATGT	NA	False	NA	-15	True	AATAAA	-17	NA	122779652	122752847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122776389_122776574_122779606
ES.24204.1	chr4	-	177	1	Intergenic	novelGene_19859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAATT	6999	False	NA	NA	False	NA	NA	NA	122862751	122862574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_122862600_122862800
ES.24205.1	chr4	+	177	1	Intergenic	novelGene_19860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGGA	1445	False	NA	NA	False	NA	NA	NA	122887710	122887887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_122887700_122887900
ES.24205.2	chr4	+	287	1	Intergenic	novelGene_19861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	1447	False	NA	NA	False	NA	NA	NA	122887712	122887999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_122887700_122888000
ES.24206.1	chr4	+	3739	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	-238	0	-83	0	multi-exon	FALSE	canonical	3	106	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3388	False	NA	NA	False	AATAAA	-18	NA	122889653	122896278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122890812_122893697
ES.24206.2	chr4	+	3351	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	-58	0	-58	0	multi-exon	FALSE	canonical	3	37	junction_1	34.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3413	False	NA	NA	False	AATAAA	-18	NA	122889678	122896278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122889944_122890306_122890812_122893697
ES.24206.3	chr4	+	3182	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	-25	136	-25	-136	multi-exon	FALSE	canonical	3	37	junction_1	34.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTTGCAAGGGTCTGG	3446	False	NA	NA	False	AAGAAA	-18	NA	122889711	122896142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122889944_122890306_122890812_122893697
ES.24206.4	chr4	+	3459	3	NNC	ENSMUSG00000028654.14	novel	3501	2	NA	NA	-56	-7	intron_retention	FALSE	canonical	0	0	junction_2	53	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTCAGAGTGGGG	3570	False	NA	NA	False	AATAAA	-11	NA	122889835	122896271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122890812_122893697_122893772_122893862
ES.24206.5	chr4	+	3128	3	NNC	ENSMUSG00000028654.14	novel	3293	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3606	False	NA	NA	False	AATAAA	-18	NA	122889871	122896278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122889944_122890336_122890812_122893697
ES.24206.6	chr4	+	2785	2	FSM	ENSMUSG00000028654.14	ENSMUST00000135925.2	728	2	-39	-2018	-39	0	multi-exon	FALSE	canonical	1	2	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	6368	False	NA	NA	False	AATAAA	-18	NA	122892633	122896278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122892838_122893697
ES.24207.1	chr4	+	1989	10	FSM	ENSMUSG00000028653.17	ENSMUST00000147165.8	1964	10	-48	23	-48	-23	multi-exon	FALSE	canonical	3	16	junction_8	29.573929126016	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACGCCCTATAGTTTCT	NA	False	NA	3	True	AATAAA	-7	NA	122910341	122948719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
ES.24207.10	chr4	+	3872	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	4	-17	intron_retention	FALSE	canonical	0	0	junction_5	33.9763897689027	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTATAGTTTCTATACAG	NA	False	NA	9	True	AATAAA	-13	NA	122910393	122948725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122942674_122942876_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.11	chr4	+	1833	9	NIC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	5	17	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	41.7522454485983	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTAGCTTTTTCTCT	NA	False	NA	43	True	AAAAAG	-44	NA	122910394	122948759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122942561_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
ES.24207.13	chr4	+	3649	10	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	6	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	41.1891151868615	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAGTTTCTATACAGCA	NA	False	NA	11	True	AATAAA	-15	NA	122910395	122948727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122938958_122940811_122942561_122942674_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.14	chr4	+	1881	9	NNC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	41	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.8682859838566	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTCTATACAGCATGC	NA	False	NA	14	True	AATAAA	-18	NA	122910430	122948730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938200_122938430_122940667_122940811_122942561_122942674_122943269_122943348_122946276_122946395_122947915
ES.24207.15	chr4	+	4248	10	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	49	-15	intron_retention	FALSE	canonical	3	89	junction_3	10.3601801786134	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAGTTTCTATACAGCA	NA	False	NA	11	True	AATAAA	-15	NA	122910438	122948727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.16	chr4	+	5093	5	NNC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	51	4350	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.6476151587624	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATATATTTTATT	NA	False	NA	NA	False	AATAAA	-10	NA	122910440	122953092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122943269_122943348_122946276_122946395_122947915_122952510_122952925
ES.24207.17	chr4	+	3954	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	57	-1937	57	1937	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTAATCCTCCCATCTG	NA	False	NA	NA	False	AAGAAA	-30	NA	122910446	122950679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.18	chr4	+	1600	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	63	411	63	335	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACAGATCGCACATTTT	NA	False	NA	NA	False	NA	NA	NA	122910452	122948331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.19	chr4	+	2082	12	NNC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	63	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	39.9505893170158	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910452	122948728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122938958_122939044_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.2	chr4	+	2105	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	-14	-17	-14	17	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTAGCTTTTTCTCT	NA	False	NA	43	True	AAAAAG	-44	NA	122910375	122948759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.21	chr4	+	3495	5	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	-1868	-15	intron_retention	FALSE	canonical	3	96	junction_3	6.22494979899437	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAGTTTCTATACAGCA	4155	False	NA	11	True	AATAAA	-15	NA	122940680	122948727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.22	chr4	+	4482	4	ISM	ENSMUSG00000028653.17	ENSMUST00000147165.8	1964	10	30459	0	-1700	0	intron_retention	FALSE	canonical	3	16	junction_3	40.1441845795323	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	4323	False	NA	26	True	AATAAA	-30	NA	122940848	122948742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_122942674_122942944_122943058_122943269_122943348_122946276
ES.24207.23	chr4	+	3419	3	NIC	ENSMUSG00000028653.17	novel	512	5	NA	NA	-1671	4	intron_retention	FALSE	canonical	3	16	junction_1	48	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCATTGTCAATTTGG	4352	False	NA	30	True	AATAAA	-34	NA	122940877	122948746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122943348_122946276_122946395_122947915
ES.24207.24	chr4	+	2949	4	NIC	ENSMUSG00000028653.17	novel	512	5	NA	NA	-1111	-16	intron_retention	FALSE	canonical	3	96	junction_2	7.11805216802087	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATAGTTTCTATACAGC	4912	False	NA	10	True	AATAAA	-14	NA	122941437	122948726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.25	chr4	+	4700	1	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	1480	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	7503	False	NA	12	True	AATAAA	-16	NA	122944028	122948728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122944000_122948700
ES.24207.26	chr4	+	207	1	Intergenic	novelGene_19864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACAATACATAGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	122952249	122952456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_122952200_122952500
ES.24207.3	chr4	+	5962	8	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	-11	1	intron_retention	FALSE	canonical	3	12	junction_4	34.1778063804509	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGCTGCATTGTCAATT	NA	False	NA	27	True	AATAAA	-31	NA	122910378	122948743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122942674_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.4	chr4	+	1546	7	NIC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	52.8890347803777	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATAGTTTCTATACAGC	NA	False	NA	10	True	AATAAA	-14	NA	122910389	122948726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122942561_122942674_122943269_122943348_122946276_122946395_122947915
ES.24207.5	chr4	+	6049	9	NIC	ENSMUSG00000028653.17	novel	2074	11	NA	NA	2	-12	intron_retention	FALSE	canonical	3	89	junction_3	10.917302780449	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTTCTATACAGCATGC	NA	False	NA	14	True	AATAAA	-18	NA	122910391	122948730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ES.24207.6	chr4	+	4072	8	NIC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	2	-15	intron_retention	FALSE	canonical	3	12	junction_5	43.4961879633944	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAGTTTCTATACAGCA	NA	False	NA	11	True	AATAAA	-15	NA	122910391	122948727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122940811_122942561_122942674_122943269_122943348_122946276_122946395_122947915
ES.24207.7	chr4	+	1835	9	NIC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	2	-14	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	40.8893323496484	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910391	122948728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122943269_122943348_122946276_122946395_122947915
ES.24207.8	chr4	+	3147	7	NNC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.228774331911	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTATAGTTTCTATACAG	NA	False	NA	9	True	AATAAA	-13	NA	122910391	122948725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933879_122941470_122942674_122942944_122943058_122943269_122943348_122946276_122946395_122947915
ES.24207.9	chr4	+	3544	9	NNC	ENSMUSG00000028653.17	novel	1964	10	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	47.7748626371652	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTTCTATACAGCAT	NA	False	NA	12	True	AATAAA	-16	NA	122910391	122948728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122938958_122940811_122942561_122942674_122943269_122943348_122946276_122946395_122947915
ES.24208.1	chr4	-	2871	1	Intergenic	novelGene_19862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6064	False	NA	NA	False	NA	NA	NA	122921396	122918525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_122918500_122921400
ES.24209.1	chr4	-	5074	1	Intergenic	novelGene_19863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGCAAAAGCGTCCCC	5625	False	NA	NA	False	NA	NA	NA	122928408	122923334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_122923300_122928400
ES.2421.1	chr10	-	169	1	Intergenic	novelGene_1847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTGAGTGGAGGTCC	7674	False	NA	NA	False	NA	NA	NA	20159265	20159096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20159100_20159300
ES.24210.1	chr4	-	154	1	Intergenic	novelGene_19865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8536	False	NA	NA	False	NA	NA	NA	122952915	122952761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_122952800_122952900
ES.24211.1	chr4	+	2134	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-14	820	-14	-820	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTATTGCGGATTT	102	False	NA	NA	False	ACTAAA	-38	NA	122998943	123019064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
ES.24211.2	chr4	+	3567	3	ISM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-13	8093	-13	-8093	5prime_fragment	FALSE	canonical	2	3	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTGTCCTGTCCC	103	False	NA	NA	False	ATTAAA	-12	NA	122998944	123011791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_122999469_123008360_123008551_123008938
ES.24211.3	chr4	+	4896	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	-4	-1952	-4	1952	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGAGCAAAATATTTATT	112	False	NA	NA	False	ATTAAA	-12	NA	122998953	123021836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
ES.24211.4	chr4	+	2901	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	40	-1	40	1	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGGTCATGGTGTTC	156	False	NA	NA	False	NA	NA	NA	122998997	123019885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
ES.24212.1	chr4	-	2381	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-2	5	intron_retention	TRUE	canonical	3	100	junction_8	324.369388198085	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTGCAAGTTGCTGAG	NA	False	NA	-9	True	AATAAA	-30	NA	123033746	123020902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.10	chr4	-	1178	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	309.335169215497	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033743	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.11	chr4	-	1212	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	423.720703264544	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033742	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123032658_123032758_123033694
ES.24212.12	chr4	-	2330	8	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	19	junction_6	363.290405003142	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033738	123020909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123032658_123032758_123033694
ES.24212.13	chr4	-	2465	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_3	492.253322318228	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033737	123020909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123024778_123024879_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.14	chr4	-	1242	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	402.767647382182	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGCCTCCTGCAAGT	NA	False	NA	-16	True	AATAAA	-23	NA	123033737	123020909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.15	chr4	-	1216	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	404.613944945604	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCTCCTGCAAG	NA	False	NA	-17	True	AATAAA	-22	NA	123033739	123020910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030620_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.16	chr4	-	2374	9	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-3	intron_retention	FALSE	canonical	3	832	junction_8	93.9161860384034	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCTCCTGCAAG	NA	False	NA	-17	True	AATAAA	-22	NA	123033739	123020910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123030692_123031318_123031363_123032658_123032758_123033694
ES.24212.18	chr4	-	1183	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	354.711832865779	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCTCCTGCAAG	NA	False	NA	-17	True	AATAAA	-22	NA	123033739	123020910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029501_123031318_123031363_123032658_123032758_123033694
ES.24212.2	chr4	-	1229	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	-40	-1	-40	1	multi-exon	FALSE	canonical	3	832	junction_9	90.3078411481501	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTCCTGCAAGTTGC	NA	False	NA	-13	True	AATAAA	-26	NA	123033784	123020906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ES.24212.20	chr4	-	1230	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_6	303.134000439116	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCTCCTGCAAG	NA	False	NA	-17	True	AATAAA	-22	NA	123033758	123020910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032758_123033694
ES.24212.22	chr4	-	5482	7	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	7	-4	intron_retention	FALSE	canonical	3	100	junction_6	364.745573425276	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTGCCTCCTGCAA	NA	False	NA	-18	True	AATAAA	-21	NA	123033737	123020911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123027151_123028847_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.23	chr4	-	3074	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	334.488664481574	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTGCCTCCTGCAA	NA	False	NA	-18	True	AATAAA	-21	NA	123033734	123020911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123023474_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ES.24212.24	chr4	-	1282	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	423.65843451512	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTGTTGCCTCCTGCA	NA	False	NA	-19	True	AATAAA	-20	NA	123033733	123020912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032837_123033694
ES.24212.25	chr4	-	4233	5	NIC	ENSMUSG00000028651.13	novel	861	7	NA	NA	629	-6	intron_retention	FALSE	canonical	3	964	junction_1	69.278423769598	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTGTTGCCTCCTGC	NA	False	NA	-20	True	AATAAA	-19	NA	123030062	123020913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123027151_123028847_123028949_123029388
ES.24212.26	chr4	-	4286	7	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-6	intron_retention	FALSE	canonical	3	100	junction_6	362.025206304754	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTGTTGCCTCCTGC	NA	False	NA	-20	True	AATAAA	-19	NA	123033739	123020913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123032758_123033702
ES.24212.27	chr4	-	3923	7	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	-9	-11	intron_retention	FALSE	canonical	3	964	junction_1	60.3013266852397	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTACTGTTGCCT	NA	False	NA	-25	True	AATAAA	-14	NA	123033732	123020918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123031363_123032658
ES.24212.3	chr4	-	5996	6	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	5	-1	intron_retention	FALSE	canonical	3	832	junction_5	111.478428406576	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033739	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123028949_123029388_123032758_123033694
ES.24212.4	chr4	-	1361	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	9	-1	intron_retention	FALSE	canonical	3	100	junction_8	328.099427574935	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033735	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.5	chr4	-	1187	9	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	354.711832865779	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033738	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029497_123031311_123031363_123032658_123032758_123033694
ES.24212.6	chr4	-	2812	8	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	100	junction_7	341.427615061422	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033743	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123030692_123031318_123031363_123032658_123032758_123033702
ES.24212.7	chr4	-	1256	10	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	304.035816603534	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123033742	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
ES.24212.9	chr4	-	4025	3	NIC	ENSMUSG00000028651.13	novel	861	7	NA	NA	1382	-1	intron_retention	FALSE	canonical	3	1037	junction_2	6	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	123029309	123020908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123024348_123027026_123027151_123028847
ES.24213.1	chr4	+	158	1	Intergenic	novelGene_19866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	123038307	123038465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123038300_123038500
ES.24213.2	chr4	+	305	1	Intergenic	novelGene_19867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGATTCATAGTTATCCCA	NA	False	NA	NA	False	NA	NA	NA	123038310	123038615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123038300_123038600
ES.24214.1	chr4	+	4839	6	NNC	ENSMUSG00000046093.10	novel	4931	5	NA	NA	-268	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAAGCTCTGTTCTTTGC	NA	False	NA	10	True	AATAAA	-11	NA	123076751	123088491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123076857_123077213_123077418_123077545_123077650_123082507_123082677_123082817_123083034_123084450
ES.24215.1	chr4	+	154	1	Intergenic	novelGene_19868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	123104843	123104997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123104800_123105000
ES.24216.1	chr4	-	162	1	Intergenic	novelGene_19869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	123148013	123147851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123147900_123148000
ES.24217.1	chr4	+	132	1	Intergenic	novelGene_19870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAACTCCAACTAT	NA	False	NA	NA	False	NA	NA	NA	123148824	123148956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123148800_123149000
ES.24218.1	chr4	+	176	1	Intergenic	novelGene_19871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGGGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	123152126	123152302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123152100_123152300
ES.24218.2	chr4	+	284	1	Intergenic	novelGene_19872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	123152126	123152410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123152100_123152400
ES.24219.1	chr4	-	178	1	Intergenic	novelGene_19873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	123162498	123162320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123162300_123162500
ES.2422.1	chr10	-	211	1	Intergenic	novelGene_1848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAAAAAGAAGGGCT	6714	False	NA	NA	False	NA	NA	NA	20164137	20163926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20163900_20164100
ES.24220.1	chr4	+	195	1	Intergenic	novelGene_19874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGTGCTCAGGAA	NA	False	NA	NA	False	NA	NA	NA	123163800	123163995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123163800_123164000
ES.24221.1	chr4	+	137	1	Intergenic	novelGene_19875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123172170	123172307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123172200_123172300
ES.24222.1	chr4	+	3328	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-229	-80	-143	-13	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGGTTTTTTGAGACA	NA	False	NA	-4	True	AATAAA	-10	NA	123176474	123192705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.10	chr4	+	3047	14	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_10	120.71542162355	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176546	123192625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.11	chr4	+	5278	12	NIC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	-41	0	intron_retention	FALSE	canonical	3	253	junction_1	60.8216468641941	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-2	True	AATAAA	-21	NA	123176576	123192615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123191566_123191653_123191887_123192305
ES.24222.12	chr4	+	3025	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	-125	119	-39	-109	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTATTATGGGTT	NA	False	NA	NA	False	AATATA	-36	NA	123176578	123192506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.13	chr4	+	3663	13	NIC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	-39	-2	intron_retention	FALSE	canonical	3	253	junction_1	64.5774190840386	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	False	NA	6	True	AATAAA	-29	NA	123176578	123192623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.15	chr4	+	2374	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.611931422652	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123176580	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123176846_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.16	chr4	+	3176	15	NNC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-37	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	145.705899618627	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATGGCTGAATTTGA	NA	False	NA	-7	True	AATAAA	-16	NA	123176580	123192610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.18	chr4	+	4579	12	NIC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	523	-4	intron_retention	FALSE	canonical	3	9	junction_3	117.004555961306	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	NA	False	NA	-6	True	AATAAA	-17	NA	123177410	123192611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123191566_123191653_123191887_123192305
ES.24222.19	chr4	+	2311	14	NIC	ENSMUSG00000011257.20	novel	3050	15	NA	NA	567	-2	intron_retention	FALSE	canonical	3	39	junction_10	107.492727151806	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	False	NA	6	True	AATAAA	-29	NA	123177454	123192623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.2	chr4	+	3201	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-140	-2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	False	NA	6	True	AATAAA	-29	NA	123176477	123192623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.20	chr4	+	2766	12	NIC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	3588	-3	intron_retention	FALSE	canonical	3	9	junction_2	118.928063540615	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123180475	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.21	chr4	+	1915	13	NNC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	3599	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	134.786533905365	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATATGGCTGAATTTG	NA	False	NA	-8	True	AATAAA	-15	NA	123180486	123192609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.22	chr4	+	1943	13	NNC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	3760	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	151.759586920307	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	NA	False	NA	-6	True	AATAAA	-17	NA	123180647	123192611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.23	chr4	+	2028	12	NIC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-5934	-3	intron_retention	FALSE	canonical	3	9	junction_1	149.678940148462	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123182822	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.24	chr4	+	4031	10	NNC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-5873	-4	intron_retention	FALSE	canonical	3	9	junction_1	146.690149635209	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGATGCCAGTTTTA	NA	False	NA	4	True	AATAAA	-27	NA	123182883	123192621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123191566_123191653_123191845_123192305
ES.24222.25	chr4	+	4567	9	NIC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	-5391	-3	intron_retention	FALSE	canonical	3	324	junction_1	40.1230529122598	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123183365	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123191566_123191653_123191887_123192305
ES.24222.26	chr4	+	1608	11	ISM	ENSMUSG00000011257.20	ENSMUST00000078734.12	2700	14	7160	13	-4709	-3	3prime_fragment	FALSE	canonical	3	6	junction_7	124.706214760933	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	317	False	NA	-5	True	AATAAA	-18	NA	123184047	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.27	chr4	+	178	1	Intergenic	novelGene_19876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	492	False	NA	NA	False	NA	NA	NA	123184222	123184400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123184200_123184400
ES.24222.28	chr4	+	2751	8	ISM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	10239	14	-1814	-4	3prime_fragment	FALSE	canonical	3	363	junction_3	32.1901239766586	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGCTGAATTTGAT	3212	False	NA	-6	True	AATAAA	-17	NA	123186942	123192611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.29	chr4	+	4505	5	NIC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	-1416	-4	intron_retention	FALSE	canonical	3	412	junction_1	12.7867118525444	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGATGCCAGTTTTA	3610	False	NA	4	True	AATAAA	-27	NA	123187340	123192621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123188638_123188785_123188874_123188994_123191566_123191653_123191887_123192305
ES.24222.3	chr4	+	3152	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	-137	96	-137	-3	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGATGCCAGTTTTAT	NA	False	NA	5	True	AATAAA	-28	NA	123176480	123192622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.30	chr4	+	1301	8	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	-394	-2	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_7	119.653922729219	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	4632	False	NA	6	True	AATAAA	-29	NA	123188362	123192623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.31	chr4	+	1242	8	NNC	ENSMUSG00000011257.20	novel	3050	15	NA	NA	-394	-3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	166.314675926604	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	4632	False	NA	-5	True	AATAAA	-18	NA	123188362	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.4	chr4	+	3192	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	-144	2	-137	-2	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	False	NA	6	True	AATAAA	-29	NA	123176480	123192623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.5	chr4	+	3329	15	NNC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	126.399290394546	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTGAATTTGATGCCA	NA	False	NA	-2	True	AATAAA	-21	NA	123176480	123192615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.6	chr4	+	3364	15	NIC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-123	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	108.96179821106	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGATGCCAGTTTTAT	NA	False	NA	5	True	AATAAA	-28	NA	123176494	123192622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24222.7	chr4	+	3121	15	NNC	ENSMUSG00000011257.20	novel	3050	15	NA	NA	-119	-3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_10	121.385370466401	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123176498	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.8	chr4	+	4704	13	NNC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-95	4	intron_retention	FALSE	canonical	3	86	junction_12	97.9952875851124	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAATTTGATGCCAGTTT	NA	False	NA	2	True	AATAAA	-25	NA	123176522	123192619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123177601_123180472_123180667_123182751_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
ES.24222.9	chr4	+	3736	14	NIC	ENSMUSG00000011257.20	novel	3166	15	NA	NA	-77	-3	intron_retention	FALSE	canonical	3	9	junction_3	113.008927751215	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGCTGAATTTGATG	NA	False	NA	-5	True	AATAAA	-18	NA	123176540	123192612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123177601_123180472_123180667_123182751_123183007_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ES.24223.1	chr4	-	5284	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-137	3261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCAGCAGTTTTGCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	123236733	123203176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
ES.24223.10	chr4	-	1598	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-147	466	-147	-466	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTCTGTCCTTCATGG	NA	False	NA	NA	False	NA	NA	NA	123236743	123206903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.11	chr4	-	3520	3	NNC	ENSMUSG00000032726.13	novel	2405	7	NA	NA	-109	-9233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGTATGTCCTGTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	123236705	123215670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123218472_123218891_123219082_123236176
ES.24223.12	chr4	-	161	1	Intergenic	novelGene_19877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	123225192	123225031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123225000_123225200
ES.24223.2	chr4	-	5619	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-441	-3261	8	3261	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGCAGCAGTTTTGCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	123237037	123203176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.3	chr4	-	5285	7	FSM	ENSMUSG00000032726.13	ENSMUST00000040496.6	2405	7	321	-3201	-128	3201	multi-exon	FALSE	canonical	0	0	junction_1	7.08676387515643	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTCTCTTCTTTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	123236724	123203236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209597_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.4	chr4	-	5588	7	NNC	ENSMUSG00000032726.13	novel	2405	7	NA	NA	-14	3200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.76863095864394	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTCTCTCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	123237059	123203237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123207210_123209597_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
ES.24223.5	chr4	-	3454	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-147	-1390	-147	1390	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCATTTGACACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	123236743	123205047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.6	chr4	-	3596	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-462	-1217	-13	1217	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGTAAACCTAA	NA	False	NA	NA	False	NA	NA	NA	123237058	123205220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.7	chr4	-	2904	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	199	1217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGTAAACCTAA	NA	False	NA	NA	False	NA	NA	NA	123236397	123205220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
ES.24223.8	chr4	-	2120	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	-147	-56	-147	56	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACATGTGTCCTGGGCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	123236743	123206381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ES.24223.9	chr4	-	2355	7	NNC	ENSMUSG00000032726.13	novel	1917	7	NA	NA	-7	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.28964257620968	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATCTGGCTAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	123237052	123206424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218472_123218891_123219082_123236176
ES.24224.1	chr4	+	2701	1	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCCCAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	123271092	123273793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123271100_123273800
ES.24224.2	chr4	+	2645	2	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAACCTTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	123271092	123273841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123272348_123272451
ES.24224.3	chr4	+	2468	3	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACAAACCCCAACTTTT	NA	False	NA	NA	False	NA	NA	NA	123271092	123273792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123272011_123272138_123272348_123272451
ES.24225.1	chr4	+	3317	1	Intergenic	novelGene_19879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123306222	123309539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123306200_123309500
ES.24226.1	chr4	+	204	1	Intergenic	novelGene_19880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTATGTGTATTTGCACA	NA	False	NA	NA	False	NA	NA	NA	123376615	123376819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123376600_123376800
ES.24227.1	chr4	+	181	1	Intergenic	novelGene_19882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123397740	123397921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123397700_123397900
ES.24227.2	chr4	+	182	2	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATCTCTCTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	123397741	123431038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123397891_123431005
ES.24227.3	chr4	+	2431	11	Antisense	novelGene_ENSMUSG00000028649.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123403656	123434760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123403847_123404441_123404595_123404740_123404832_123404909_123405037_123405596_123405694_123405838_123405959_123406553_123406662_123406762_123406878_123407629_123407795_123429994_123430086_123433586
ES.24228.1	chr4	+	177	1	Intergenic	novelGene_19885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	123474977	123475154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123475000_123475200
ES.24229.1	chr4	+	4106	1	Intergenic	novelGene_19888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACCAAAAGACTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	123501816	123505922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123501800_123505900
ES.2423.1	chr10	+	184	1	Intergenic	novelGene_1849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAAATTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	20184264	20184448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20184300_20184400
ES.24230.1	chr4	+	165	1	Intergenic	novelGene_19890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATCATAAAATG	NA	False	NA	NA	False	NA	NA	NA	123520222	123520387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123520200_123520400
ES.24231.1	chr4	+	166	1	Intergenic	novelGene_19894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	123553455	123553621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123553500_123553600
ES.24232.1	chr4	+	3442	5	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2631	6674	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.3923048454133	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGCTGCAGTCCAGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	123557042	123571684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561406_123561541_123564261_123564360_123564711_123565243_123569136
ES.24232.2	chr4	+	386	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2624	-168	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACACATGTTTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	123557049	123564835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561402_123561541_123564711
ES.24232.3	chr4	+	673	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2598	142	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	12.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCAAACCTCATTGG	NA	False	NA	NA	False	GATAAA	-22	NA	123557075	123565152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561406_123561541_123564711
ES.24232.4	chr4	+	328	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2591	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	11	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCGCCTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	123557082	123562522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561406_123561541_123562419
ES.24232.5	chr4	+	5223	3	NNC	ENSMUSG00000087307.2	novel	431	2	NA	NA	-2586	4700	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCCTCTCTTTTCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	123557087	123569710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561402_123561541_123564711
ES.24232.6	chr4	+	521	3	NNC	ENSMUSG00000087307.2	novel	678	3	NA	NA	-2585	-1	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGACCATTGTGGTTCA	NA	False	NA	8	True	NA	NA	NA	123557088	123565009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123557174_123561402_123561541_123564711
ES.24233.1	chr4	-	11452	52	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	24152	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	79.4219359257247	481	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTTTTTTTTCTTTATC	2153	False	NA	9	True	AAAACA	-45	NA	123348838	123243374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123288015_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786
ES.24233.10	chr4	-	7172	36	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-6760	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.685409626579	471	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCATAGAACTCAT	NA	False	NA	-9	True	AAAACA	-27	NA	123291091	123243392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288061_123288798_123289041_123289705_123289791_123290886
ES.24233.100	chr4	-	8123	50	NNC	ENSMUSG00000028649.22	novel	17268	94	NA	NA	-582	16820	intron_retention	FALSE	canonical	0	0	junction_5	14.0145696782065	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAAGGAAGCCCTGGC	6503	False	NA	NA	False	NA	NA	NA	123559127	123333321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343746_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123558258
ES.24233.101	chr4	-	3049	5	ISM	ENSMUSG00000028649.22	ENSMUST00000106224.8	23402	98	211459	113414	6296	-6785	internal_fragment	FALSE	canonical	2	7	junction_4	1.08972473588517	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCATAGTAAGACTCCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	123366694	123356926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799
ES.24233.102	chr4	-	6055	5	ISM	ENSMUSG00000028649.22	ENSMUST00000106224.8	23402	98	208258	113609	3095	-6980	internal_fragment	FALSE	canonical	2	7	junction_4	1.08972473588517	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTGTTTTCATTTT	NA	False	NA	NA	False	AATATA	-19	NA	123369895	123357121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799
ES.24233.103	chr4	-	4733	1	NIC	ENSMUSG00000028649.22	novel	23495	98	NA	NA	3963	505	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAATGTTATGATGTT	NA	False	NA	NA	False	NA	NA	NA	123369027	123364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123364300_123369000
ES.24233.104	chr4	-	10202	37	NIC	ENSMUSG00000028649.22	novel	23495	98	NA	NA	-11	198	combination_of_known_junctions	FALSE	canonical	1	2	junction_36	15.3027825679184	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTTTTAGTTTGT	6428	False	NA	NA	False	NA	NA	NA	123507547	123364601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123370131_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123507379
ES.24233.105	chr4	-	178	1	Intergenic	novelGene_19881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	8290	False	NA	NA	False	NA	NA	NA	123379066	123378888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123378900_123379100
ES.24233.106	chr4	-	5989	30	NNC	ENSMUSG00000028649.22	novel	5706	39	NA	NA	-47	-15512	intron_retention	FALSE	canonical	0	0	junction_2	16.1097602633671	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTATCTTTCTGTTTT	7038	False	NA	NA	False	AAAAAG	-13	NA	123558592	123380311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123382206_123383002_123383187_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.107	chr4	-	4015	30	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	97	31979	97	-17321	5prime_fragment	FALSE	canonical	2	9	junction_5	14.7965995386526	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGTACCATATCCCAGA	7182	False	NA	NA	False	NA	NA	NA	123558448	123382120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.108	chr4	-	1795	14	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-18	53513	-18	1944	5prime_fragment	FALSE	canonical	3	21	junction_11	9.57251984039075	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACTGAACTTGTATCTAT	7067	False	NA	NA	False	NA	NA	NA	123558563	123403654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.109	chr4	-	2657	1	Intergenic	novelGene_19883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAACAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123416068	123413411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123413400_123416100
ES.24233.110	chr4	-	4011	3	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-42	84863	-42	-2332	5prime_fragment	FALSE	canonical	3	50	junction_1	1	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTGATTCTTTTTT	7043	False	NA	NA	False	ATTAAA	-14	NA	123558587	123435004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123438625_123448096_123448159_123558258
ES.24233.111	chr4	-	1806	3	ISM	ENSMUSG00000028649.22	ENSMUST00000147030.2	5706	39	-20	87046	-20	-4515	5prime_fragment	FALSE	canonical	3	50	junction_1	1	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACAAACAGAATTGCC	7065	False	NA	NA	False	NA	NA	NA	123558565	123437187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123438625_123448096_123448159_123558258
ES.24233.112	chr4	-	175	1	Intergenic	novelGene_19884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGATGGCTAATAG	8	True	NA	NA	False	NA	NA	NA	123473136	123472961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123473000_123473100
ES.24233.113	chr4	-	178	1	Intergenic	novelGene_19886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATGAAGGG	8961	False	NA	NA	False	NA	NA	NA	123477457	123477279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123477300_123477500
ES.24233.114	chr4	-	4162	1	Intergenic	novelGene_19887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGATTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	123496793	123492631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123492600_123496800
ES.24233.115	chr4	-	1819	1	Intergenic	novelGene_19889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGATTCAACTATCAAA	8956	False	NA	NA	False	NA	NA	NA	123518741	123516922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123516900_123518700
ES.24233.116	chr4	-	511	1	Intergenic	novelGene_19891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1258	False	NA	NA	False	NA	NA	NA	123526439	123525928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123525900_123526400
ES.24233.117	chr4	-	174	1	Intergenic	novelGene_19892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTTAGCTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	123540419	123540245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123540200_123540400
ES.24233.118	chr4	-	179	1	Intergenic	novelGene_19893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTAAGACATGGC	NA	False	NA	NA	False	NA	NA	NA	123551187	123551008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123551000_123551200
ES.24233.12	chr4	-	6847	34	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-4684	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	64.0273701805049	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAAAATCATAGAACT	NA	False	NA	-12	True	AAAACA	-24	NA	123289015	123243395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798
ES.24233.14	chr4	-	12807	57	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	18089	0	intron_retention	FALSE	non_canonical	0	0	junction_4	78.6118220032678	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATCATTGAACAAGA	NA	False	NA	-42	True	TATAAA	-16	NA	123354901	123243425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281014_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877
ES.24233.15	chr4	-	17385	93	NNC	ENSMUSG00000028649.22	novel	17268	94	NA	NA	257	0	intron_retention	FALSE	non_canonical	0	0	junction_4	78.6356988477264	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	7342	False	NA	-8	True	ATTAAA	-18	NA	123558288	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391518_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123558258
ES.24233.16	chr4	-	4077	2	ISM	ENSMUSG00000028649.22	ENSMUST00000149022.8	2222	7	11981	0	11981	0	3prime_fragment	FALSE	canonical	3	282	junction_1	0	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123248261	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123244939_123245614
ES.24233.18	chr4	-	7656	30	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_4	60.3681925209964	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	2560	False	NA	-8	True	ATTAAA	-18	NA	123284337	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123281225_123282911_123283131_123284316
ES.24233.19	chr4	-	9999	43	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-26438	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	68.1214110540213	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123332459	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259
ES.24233.2	chr4	-	3545	15	NIC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-4098	40	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	91.3908404288182	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAACTCATTACTTTT	NA	False	NA	-2	True	AAAACA	-34	NA	123270258	123243385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123244939_123245614_123245745_123248271_123248374_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163
ES.24233.20	chr4	-	17555	93	NNC	ENSMUSG00000028649.22	novel	17268	94	NA	NA	-44	0	intron_retention	FALSE	non_canonical	0	0	junction_4	78.7324619652387	535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	6395	False	NA	-8	True	ATTAAA	-18	NA	123507580	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254838_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123507379
ES.24233.21	chr4	-	12369	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	269	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.7294874859705	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123305752	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
ES.24233.24	chr4	-	7351	38	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-7371	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	60.8109429427994	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123291702	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540
ES.24233.25	chr4	-	3780	4	ISM	ENSMUSG00000028649.22	ENSMUST00000154824.8	2808	13	9450	0	3532	0	3prime_fragment	FALSE	canonical	3	282	junction_1	9.03081145609604	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123256710	123243508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702
ES.24233.3	chr4	-	3150	4	ISM	ENSMUSG00000028649.22	ENSMUST00000154824.8	2808	13	10203	-123	4285	40	3prime_fragment	FALSE	canonical	3	282	junction_1	9.03081145609604	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAACTCATTACTTTT	NA	False	NA	-2	True	AAAACA	-34	NA	123255957	123243385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702
ES.24233.30	chr4	-	3599	3	ISM	ENSMUSG00000028649.22	ENSMUST00000154824.8	2808	13	15271	2	9353	0	3prime_fragment	FALSE	canonical	3	282	junction_1	11	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGTAATTCTTGGC	NA	False	NA	-10	True	ATTAAA	-16	NA	123250889	123243510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123244939_123245614_123245745_123248848
ES.24233.32	chr4	-	4184	10	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-22703	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.6740733260022	476	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTTGTAATTCTTGG	NA	False	NA	-11	True	ATTAAA	-15	NA	123328724	123243511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244678_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492
ES.24233.35	chr4	-	5085	25	NNC	ENSMUSG00000028649.22	novel	23402	98	NA	NA	7824	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.6524284511446	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTTGTAATTCTTG	NA	False	NA	-12	True	ATTAAA	-14	NA	123276507	123243512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248271_123248374_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405
ES.24233.36	chr4	-	17389	92	NNC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	137	0	intron_retention	FALSE	canonical	0	0	junction_28	77.8739440719308	555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTTGTAATTCTTG	7222	False	NA	-12	True	ATTAAA	-14	NA	123558408	123243512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281014_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.38	chr4	-	3292	14	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-4065	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.3909880592053	469	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTTTTGTAATTCTT	NA	False	NA	-13	True	ATTAAA	-13	NA	123270225	123243513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264384_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163
ES.24233.40	chr4	-	10129	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	2505	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.7294874859705	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTTTTGTAATTCTT	NA	False	NA	-13	True	ATTAAA	-13	NA	123303516	123243513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254838_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
ES.24233.41	chr4	-	5472	29	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	4958	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.869886194837	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTTTTGTAATTCTT	7524	False	NA	-13	True	ATTAAA	-13	NA	123279373	123243513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123243532_123243620_123244939_123245614_123245745_123248848_123249061_123254702_123254838_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247
ES.24233.49	chr4	-	5078	26	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	7218	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.515246578311	469	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATGTTTTGTAATTCT	9784	False	NA	-14	True	ATTAAA	-12	NA	123277113	123243514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272328_123272456_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093
ES.24233.5	chr4	-	7837	40	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	10418	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.134417328831	471	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAACTCATTACTTTT	NA	False	NA	-2	True	AAAACA	-34	NA	123295603	123243385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284394_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543
ES.24233.52	chr4	-	9072	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-21016	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.1351864259303	476	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATGTTTTGTAATTCT	NA	False	NA	-14	True	ATTAAA	-12	NA	123327037	123243514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245729_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790
ES.24233.55	chr4	-	12603	57	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	18022	-166	intron_retention	FALSE	canonical	0	0	junction_28	77.3507264684959	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGGGCTGTCTGGGGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	123354968	123243678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877
ES.24233.56	chr4	-	6437	34	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-4544	-171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.6542552636571	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGAGGGGCTGTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	123288875	123243683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281014_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798
ES.24233.57	chr4	-	3178	16	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-4735	-269	combination_of_known_junctions	FALSE	canonical	3	170	junction_15	33.8239888573513	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCTCATCCTTTAACG	NA	False	NA	NA	False	AATGAA	-35	NA	123270895	123243781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847
ES.24233.58	chr4	-	17659	62	NNC	ENSMUSG00000028649.22	novel	23495	98	NA	NA	3379	-747	intron_retention	FALSE	non_canonical	0	0	junction_4	82.8844806978581	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTCTTCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	123369611	123244259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799
ES.24233.59	chr4	-	16810	92	NNC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-18	-748	intron_retention	FALSE	non_canonical	0	0	junction_4	78.3825378747739	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAAGGAACTCTTCTT	7067	False	NA	NA	False	ATTAAA	-18	NA	123558563	123244260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.61	chr4	-	9034	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	2835	-749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	69.2115913341111	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTAAGGAACTCTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	123303186	123244261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
ES.24233.62	chr4	-	8311	30	NNC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	1265	-750	intron_retention	FALSE	canonical	0	0	junction_28	59.3279043773849	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	3831	False	NA	NA	False	ATTAAA	-16	NA	123283066	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911
ES.24233.63	chr4	-	11751	56	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	21249	-750	intron_retention	FALSE	non_canonical	0	0	junction_5	77.5928896802125	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	123351741	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248271_123248374_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281014_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579
ES.24233.64	chr4	-	5010	27	NIC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	5031	-750	intron_retention	FALSE	canonical	3	50	junction_4	54.2415837553074	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	7597	False	NA	NA	False	ATTAAA	-16	NA	123279300	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247
ES.24233.65	chr4	-	9207	59	NNC	ENSMUSG00000028649.22	novel	17268	94	NA	NA	2279	-750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.0132983305117	495	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	8564	False	NA	NA	False	ATTAAA	-16	NA	123436345	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123384438_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284
ES.24233.67	chr4	-	8179	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-20847	-750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.7977061754242	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	123326868	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281008_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790
ES.24233.70	chr4	-	12458	60	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-4984	-750	intron_retention	FALSE	canonical	0	0	junction_28	78.5688345583728	480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTAAGGAACTCTTC	9382	False	NA	NA	False	ATTAAA	-16	NA	123377974	123244262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819
ES.24233.71	chr4	-	13886	76	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-12927	-751	intron_retention	FALSE	non_canonical	0	0	junction_4	84.3253846056387	493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTTTAAGGAACTCTT	9112	False	NA	NA	False	ATTAAA	-15	NA	123406637	123244263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278510_123291626_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554
ES.24233.72	chr4	-	5871	34	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-4569	-751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5822222710312	464	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTTTAAGGAACTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	123288900	123244263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284955_123287862_123288070_123288798
ES.24233.73	chr4	-	11415	47	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	31028	-752	intron_retention	FALSE	non_canonical	0	0	junction_4	74.6867086056418	474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGTTTAAGGAACTCT	9029	False	NA	NA	False	ATTAAA	-14	NA	123341962	123244264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260241_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894
ES.24233.78	chr4	-	6361	10	NIC	ENSMUSG00000028649.22	novel	17608	92	NA	NA	-97	-752	intron_retention	FALSE	canonical	3	206	junction_6	33.1599192838822	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGTTTAAGGAACTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	123266257	123244264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142
ES.24233.80	chr4	-	11563	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	318	-753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.7294874859705	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTGTTTAAGGAACTC	NA	False	NA	NA	False	ATTAAA	-13	NA	123305703	123244265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
ES.24233.83	chr4	-	7360	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-20054	-768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.6315786534555	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGAATTCCGAA	NA	False	NA	NA	False	TATAAA	-35	NA	123326075	123244280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254831_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276401_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281014_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790
ES.24233.84	chr4	-	13086	61	NNC	ENSMUSG00000028649.22	novel	23495	98	NA	NA	7868	-768	intron_retention	FALSE	non_canonical	0	0	junction_4	83.9898059290531	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGAATTCCGAA	NA	False	NA	NA	False	TATAAA	-35	NA	123365122	123244280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799
ES.24233.86	chr4	-	4335	27	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	7222	-768	combination_of_known_junctions	FALSE	canonical	3	150	junction_26	40.5227126027662	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGAATTCCGAA	9788	False	NA	NA	False	TATAAA	-35	NA	123277109	123244280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093
ES.24233.89	chr4	-	1812	10	ISM	ENSMUSG00000028649.22	ENSMUST00000134458.8	14463	70	128017	885	467	-881	3prime_fragment	FALSE	canonical	3	50	junction_4	71.9765050829131	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGGTTTCATGTGGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	123265693	123244393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564
ES.24233.9	chr4	-	2799	10	NNC	ENSMUSG00000028649.22	novel	2808	13	NA	NA	-765	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.612462596549	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAACTCATTACTTTT	NA	False	NA	-2	True	AAAACA	-34	NA	123264489	123243385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248271_123248374_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378
ES.24233.90	chr4	-	11310	41	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	277	-1047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.7294874859705	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTATTTTTTTTTCC	NA	False	NA	2	True	NA	NA	NA	123305744	123244559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
ES.24233.92	chr4	-	16522	92	NNC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-41	-1059	intron_retention	FALSE	non_canonical	0	0	junction_4	78.3825378747739	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATGAAGCTGCCTT	7044	False	NA	-10	True	NA	NA	NA	123558586	123244571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123558258
ES.24233.93	chr4	-	6926	42	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-19813	-1059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.8071821576664	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATGAAGCTGCCTT	NA	False	NA	-10	True	NA	NA	NA	123325834	123244571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248271_123248374_123248848_123249061_123254702_123254837_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790
ES.24233.95	chr4	-	7294	42	NNC	ENSMUSG00000028649.22	novel	17175	90	NA	NA	-20287	-1069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	64.0289754455681	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGAATTGTGTTATG	NA	False	NA	-20	True	NA	NA	NA	123326308	123244581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790
ES.24233.96	chr4	-	5355	33	NNC	ENSMUSG00000028649.22	novel	14463	70	NA	NA	-3649	-1069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	64.4617664661581	462	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGAATTGTGTTATG	NA	False	NA	-20	True	NA	NA	NA	123287980	123244581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281016_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862
ES.24233.97	chr4	-	177	1	Intergenic	novelGene_19878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAGATGATGATGA	NA	False	NA	NA	False	NA	NA	NA	123266571	123266394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123266400_123266600
ES.24233.98	chr4	-	4931	1	NIC	ENSMUSG00000028649.22	novel	5597	6	NA	NA	3697	-6326	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	123302324	123297393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123297400_123302300
ES.24233.99	chr4	-	4197	3	ISM	ENSMUSG00000028649.22	ENSMUST00000134458.8	14463	70	61354	80150	-26335	26483	internal_fragment	FALSE	canonical	3	64	junction_1	3	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGATGTACTGTACATA	NA	False	NA	NA	False	NA	NA	NA	123332356	123323658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_123327263_123328492_123328989_123332259
ES.24234.1	chr4	-	1314	3	NNC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	-2926	-144397	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTATTTCCTTATA	NA	False	NA	NA	False	AATAAA	-14	NA	123581079	123577069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123578035_123579172_123579441_123580998
ES.24234.2	chr4	-	3633	1	Genic_Genomic	ENSMUSG00000028649.22	novel	NA	NA	NA	NA	-3002	-144850	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCTACTGCCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	123581155	123577522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_123577500_123581200
ES.24235.1	chr4	-	170	1	Intergenic	novelGene_19895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	123587076	123586906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123586900_123587100
ES.24236.1	chr4	-	182	1	Intergenic	novelGene_19896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	123590288	123590106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123590100_123590300
ES.24237.1	chr4	+	397	1	Intergenic	novelGene_19897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCAAGACAACAAG	NA	False	NA	NA	False	ATTAAA	-31	NA	123601519	123601916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123601500_123601900
ES.24238.1	chr4	-	158	1	Intergenic	novelGene_19898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	9454	False	NA	NA	False	NA	NA	NA	123604373	123604215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123604200_123604400
ES.24239.1	chr4	+	173	1	Intergenic	novelGene_19899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAACCTTGTGC	NA	False	NA	NA	False	NA	NA	NA	123605770	123605943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123605800_123605900
ES.2424.1	chr10	+	3367	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-136	-89	-68	86	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAACTCTGTGACAACTC	2722	False	NA	98	True	NA	NA	NA	20188146	20216098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.10	chr10	+	4341	11	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	294	junction_9	204.471122655499	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2788	False	NA	8	True	AATAAA	-16	NA	20188212	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.100	chr10	+	5563	14	NNC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	353.429102052328	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2795	False	NA	13	True	AATAAA	-14	NA	20188219	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208265_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.101	chr10	+	3754	13	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	2	-6	intron_retention	FALSE	canonical	3	11	junction_12	260.790291975926	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGAGCTTGGACAATTA	2795	False	NA	NA	False	ATTAAA	-7	NA	20188219	20220353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797_20215879_20219803
ES.2424.103	chr10	+	3198	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	264.454574969355	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2795	False	NA	9	True	AATAAA	-17	NA	20188219	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210257_20210392_20215454_20215668_20215797
ES.2424.104	chr10	+	2586	9	ISM	ENSMUSG00000037608.17	ENSMUST00000190156.7	3164	13	-55	7867	2	137	5prime_fragment	FALSE	canonical	3	221	junction_3	240.493632971852	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTATTTGTCTTTT	2795	False	NA	NA	False	ATTAAA	-17	NA	20188219	20208141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831
ES.2424.106	chr10	+	3372	14	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	323.935525764111	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2795	False	NA	8	True	AATAAA	-16	NA	20188219	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.107	chr10	+	5602	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	356.091139188107	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2795	False	NA	14	True	AATAAA	-15	NA	20188219	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20196350_20196512_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.108	chr10	+	3994	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	5	1308	2	927	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCTTTTTC	2795	False	NA	NA	False	TATAAA	-36	NA	20188219	20216939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.109	chr10	+	3337	13	FSM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	4	-110	4	110	multi-exon	FALSE	canonical	3	15	junction_10	359.421864094116	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCCTGTTAATAAG	2797	False	NA	122	True	NA	NA	NA	20188221	20216122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.11	chr10	+	5303	12	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2788	False	NA	16	True	AATAAA	-17	NA	20188212	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.110	chr10	+	7312	6	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	4	-1	intron_retention	FALSE	canonical	3	760	junction_3	110.278556392437	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTGCTGTTTTTGTTT	2797	False	NA	NA	False	ATTAAA	-18	NA	20188221	20209635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20205141_20207831
ES.2424.111	chr10	+	5465	11	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	5	22	intron_retention	FALSE	canonical	3	695	junction_9	120.95850528177	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTTGACTGTTTTT	2798	False	NA	34	True	AATAAA	-42	NA	20188222	20216034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.112	chr10	+	5459	13	FSM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	5	-2233	5	0	multi-exon	FALSE	canonical	3	15	junction_10	359.421864094116	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2798	False	NA	14	True	AATAAA	-15	NA	20188222	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.113	chr10	+	5328	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	255.51053429574	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2798	False	NA	13	True	AATAAA	-14	NA	20188222	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20198771_20198885_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.114	chr10	+	5550	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	320.241975819728	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2799	False	NA	14	True	AATAAA	-15	NA	20188223	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193157_20193265_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.116	chr10	+	5180	10	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	-5	1	intron_retention	FALSE	canonical	3	221	junction_3	288.12167354337	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTAACTATCAAC	2800	False	NA	10	True	AATAAA	-18	NA	20188224	20216010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.117	chr10	+	5326	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-58	-2126	-5	-110	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCAATGGGAATGAATGT	2800	False	NA	-96	True	ATTAAA	-20	NA	20188224	20218135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.118	chr10	+	3032	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-3	10	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_5	256.785727255668	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCAACTTTTAAAAACAT	2802	False	NA	22	True	AATAAA	-30	NA	20188226	20216022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201367_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.119	chr10	+	3134	1	FSM	ENSMUSG00000037608.17	ENSMUST00000216560.2	3064	1	-50	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	840	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGGTGATAAGTAGCT	2803	False	NA	NA	False	NA	NA	NA	20188227	20191361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188200_20191400
ES.2424.12	chr10	+	5471	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	262.85716442374	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2788	False	NA	16	True	AATAAA	-17	NA	20188212	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.120	chr10	+	5564	12	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-54	-2238	-1	0	intron_retention	FALSE	canonical	3	221	junction_3	211.31117628545	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2804	False	NA	16	True	AATAAA	-17	NA	20188228	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454
ES.2424.121	chr10	+	5397	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	264.259381731914	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2824	False	NA	14	True	AATAAA	-15	NA	20188248	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205076_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.122	chr10	+	3184	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	262.85716442374	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2836	False	NA	8	True	AATAAA	-16	NA	20188260	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.124	chr10	+	5246	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.366000578683	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2840	False	NA	13	True	AATAAA	-14	NA	20188264	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197756_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.127	chr10	+	8373	19	Fusion	ENSMUSG00000037608.17_ENSMUSG00000019992.9	novel	3231	13	NA	NA	1	369	intron_retention	FALSE	canonical	1	7	junction_14	385.863469745389	1153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGCCAATCTCAGTAC	2859	False	NA	35	True	AATAAA	-36	NA	20188283	20237419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797_20215879_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20233513_20236280
ES.2424.128	chr10	+	5566	13	NNC	ENSMUSG00000037608.17	novel	2383	10	NA	NA	377	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.320106562604	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	3235	False	NA	14	True	AATAAA	-15	NA	20188659	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188910_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.129	chr10	+	5549	12	NNC	ENSMUSG00000037608.17	novel	2383	10	NA	NA	378	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	298.670165514728	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	3236	False	NA	13	True	AATAAA	-14	NA	20188660	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20189042_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.13	chr10	+	3445	14	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	319.624187604404	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2788	False	NA	8	True	AATAAA	-16	NA	20188212	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.130	chr10	+	3346	13	NNC	ENSMUSG00000037608.17	novel	2383	10	NA	NA	407	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.320106562604	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGCATTGTATTTCTG	3265	False	NA	55	True	TTTAAA	-19	NA	20188689	20216055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188910_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.131	chr10	+	3481	13	NNC	ENSMUSG00000037608.17	novel	2383	10	NA	NA	409	48	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	252.548455196666	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTGTATTTCTGCTTTG	3267	False	NA	60	True	TTTAAA	-24	NA	20188691	20216060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20189042_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.132	chr10	+	3081	12	ISM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	5522	2237	2052	0	3prime_fragment	FALSE	canonical	3	695	junction_10	96.6688989957879	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	8327	False	NA	8	True	AATAAA	-16	NA	20193751	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.133	chr10	+	2977	11	ISM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	9518	2236	-1718	0	3prime_fragment	FALSE	canonical	3	695	junction_9	97.3100200390484	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	NA	False	NA	9	True	AATAAA	-17	NA	20197747	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.134	chr10	+	3928	9	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	-613	0	intron_retention	FALSE	canonical	3	21	junction_3	390.326766152412	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	NA	False	NA	8	True	AATAAA	-16	NA	20198852	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20209319_20215454_20215668_20215797
ES.2424.135	chr10	+	5461	7	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-306	-1	intron_retention	FALSE	canonical	3	695	junction_5	98.6955194299901	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATATTTGTAACTATC	NA	False	NA	7	True	AATAAA	-15	NA	20199159	20216007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20199615_20200885_20203954_20205055_20205141_20207831_20208008_20209137_20210392_20215454_20215668_20215797
ES.2424.136	chr10	+	4152	6	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	154	0	intron_retention	FALSE	canonical	3	695	junction_4	123.151289071613	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	NA	False	NA	8	True	AATAAA	-16	NA	20201944	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.137	chr10	+	4708	8	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	867	0	intron_retention	FALSE	canonical	3	15	junction_4	380.078133750288	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	NA	False	NA	14	True	AATAAA	-15	NA	20202657	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.138	chr10	+	5181	6	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1336	0	intron_retention	FALSE	canonical	3	695	junction_4	119.501631788022	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	NA	False	NA	16	True	AATAAA	-17	NA	20203126	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.139	chr10	+	8477	4	FSM	ENSMUSG00000037608.17	ENSMUST00000188546.2	834	4	-5350	-2293	-1145	0	multi-exon	FALSE	canonical	3	695	junction_2	151.932733653928	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	39	False	NA	14	True	AATAAA	-15	NA	20203649	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.14	chr10	+	5450	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-70	-2238	-2	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2788	False	NA	16	True	AATAAA	-17	NA	20188212	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.140	chr10	+	3357	7	ISM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	15616	1	-949	-1	3prime_fragment	FALSE	canonical	3	695	junction_5	112.953899150642	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	235	False	NA	13	True	AATAAA	-14	NA	20203845	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.141	chr10	+	4923	5	ISM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	17844	0	1279	0	3prime_fragment	FALSE	canonical	3	695	junction_3	133.539320052185	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	712	False	NA	14	True	AATAAA	-15	NA	20206073	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.142	chr10	+	3205	5	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1756	0	intron_retention	FALSE	canonical	3	34	junction_1	360.995412020707	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	1189	False	NA	8	True	AATAAA	-16	NA	20206550	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20208008_20208141_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.143	chr10	+	3125	3	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1824	0	intron_retention	FALSE	canonical	3	294	junction_1	365.5	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	1257	False	NA	9	True	AATAAA	-17	NA	20206618	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20209319_20215454_20215668_20215797
ES.2424.144	chr10	+	2868	4	FSM	ENSMUSG00000037608.17	ENSMUST00000188546.2	834	4	-1957	-77	-1957	17	multi-exon	FALSE	canonical	3	695	junction_2	151.932733653928	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	1681	False	NA	29	True	AATAAA	-37	NA	20207042	20216029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.145	chr10	+	4364	3	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	-1382	0	intron_retention	FALSE	canonical	3	294	junction_1	365.5	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2256	False	NA	16	True	AATAAA	-17	NA	20207617	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20209319_20215454_20215668_20215797
ES.2424.146	chr10	+	2072	4	NNC	ENSMUSG00000037608.17	novel	834	4	NA	NA	-442	-2	intron_retention	FALSE	canonical	0	0	junction_1	427.206689502348	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCATATTTGTAACTAT	117	False	NA	6	True	AATAAA	-14	NA	20208557	20216006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20208954_20209137_20210392_20215454_20215668_20215797
ES.2424.147	chr10	+	659	1	Intergenic	novelGene_1850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	969	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGTACATATGCTCACAC	4670	False	NA	NA	False	NA	NA	NA	20213110	20213769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20213100_20213800
ES.2424.148	chr10	+	2033	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	5	-47	5	47	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGGTTATTTTGTGAG	NA	False	NA	54	True	NA	NA	NA	20223520	20237097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ES.2424.149	chr10	+	2352	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	5	-366	5	366	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTTGGCCAATCTCAG	NA	False	NA	32	True	AATAAA	-33	NA	20223520	20237416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ES.2424.15	chr10	+	6437	11	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_9	204.615835164339	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2790	False	NA	16	True	AATAAA	-17	NA	20188214	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20209319_20215454_20215668_20215797
ES.2424.150	chr10	+	5512	5	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	18	0	intron_retention	FALSE	canonical	3	160	junction_4	12.1732288239399	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGAGTATTTAACAT	NA	False	NA	7	True	AATAAA	-14	NA	20223533	20237050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20233513_20236280
ES.2424.152	chr10	+	6266	5	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	22	1460	22	-1051	intron_retention	FALSE	canonical	3	174	junction_4	7.08431365765238	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTGTGTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	20223537	20235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775
ES.2424.153	chr10	+	5005	6	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	-24	50	intron_retention	FALSE	canonical	3	160	junction_5	11.0887330205033	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTATTTTGTGAGAAG	NA	False	NA	57	True	NA	NA	NA	20223540	20237100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20233513_20236280
ES.2424.154	chr10	+	6768	4	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	32	1498	-17	-1089	intron_retention	FALSE	canonical	3	179	junction_1	5.73488351136175	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20223547	20235552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112
ES.2424.155	chr10	+	2929	5	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	158	junction_3	14.396180048888	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGAGTATTTAACAT	NA	False	NA	7	True	AATAAA	-14	NA	20223565	20237050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20223670_20224080_20224182_20228569_20230012_20233000_20233513_20236280
ES.2424.156	chr10	+	3248	6	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	51	1460	2	-1051	5prime_fragment	FALSE	canonical	3	158	junction_5	11.7541482039321	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTGTGTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	20223566	20235590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000
ES.2424.157	chr10	+	5258	6	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	16	343	intron_retention	FALSE	canonical	3	160	junction_5	11.0887330205033	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGGGCCTCCATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	20223580	20237393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20233513_20236280
ES.2424.158	chr10	+	2189	6	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	564	-351	327	351	3prime_fragment	FALSE	canonical	3	158	junction_4	13.6674796506159	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTGAACGCACT	NA	False	NA	17	True	AATAAA	-18	NA	20224079	20237401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ES.2424.159	chr10	+	1836	6	ISM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	564	2	327	-2	3prime_fragment	FALSE	canonical	3	158	junction_4	13.6674796506159	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGTTGAGTATTTAAC	NA	False	NA	5	True	AATAAA	-12	NA	20224079	20237048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ES.2424.16	chr10	+	3650	14	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	297.194953249019	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTGGCTGTTCCAGTG	2790	False	NA	NA	False	ATTAAA	-28	NA	20188214	20220374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797_20215879_20219803
ES.2424.17	chr10	+	5070	11	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	294	junction_9	203.716862335939	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2791	False	NA	9	True	AATAAA	-17	NA	20188215	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.18	chr10	+	4195	11	NNC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	0	intron_retention	FALSE	canonical	2	49	junction_7	313.292658707478	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2791	False	NA	9	True	AATAAA	-17	NA	20188215	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205058_20205141_20207831_20209319_20215454_20215668_20215797
ES.2424.19	chr10	+	5673	14	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	347.991345196056	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2791	False	NA	14	True	AATAAA	-15	NA	20188215	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.2	chr10	+	5665	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-83	-145	-68	143	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAATTGCTTTCTTG	2722	False	NA	20	True	GATAAA	-20	NA	20188146	20218390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.21	chr10	+	3220	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-14	2231	1	2	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAACTATCAACTTTT	2791	False	NA	14	True	AATAAA	-22	NA	20188215	20216014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.22	chr10	+	4779	12	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	15	intron_retention	FALSE	canonical	3	11	junction_11	310.670668816369	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTGGCTGTTCCAGTG	2791	False	NA	NA	False	ATTAAA	-28	NA	20188215	20220374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797_20215879_20219803
ES.2424.23	chr10	+	6437	10	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	221	junction_3	236.823318004409	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2791	False	NA	9	True	AATAAA	-17	NA	20188215	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.24	chr10	+	6569	10	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	108	intron_retention	FALSE	canonical	3	15	junction_7	392.788448699932	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCTCCCTGTTAATA	2791	False	NA	120	True	NA	NA	NA	20188215	20216120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.25	chr10	+	5667	15	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	413.874155180691	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2792	False	NA	14	True	AATAAA	-15	NA	20188216	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201367_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208316_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.26	chr10	+	3086	12	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	-1	22	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTTGACTGTTTTT	2792	False	NA	34	True	AATAAA	-42	NA	20188216	20216034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.27	chr10	+	5265	12	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	298.670165514728	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2793	False	NA	14	True	AATAAA	-15	NA	20188217	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188314_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.29	chr10	+	2600	9	ISM	ENSMUSG00000037608.17	ENSMUST00000186100.7	3231	13	0	7865	0	143	intron_retention	FALSE	canonical	3	760	junction_3	88.238225135142	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGTCTTTTACACGG	2793	False	NA	NA	False	ATTAAA	-23	NA	20188217	20208147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831
ES.2424.3	chr10	+	4431	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	-68	14	intron_retention	FALSE	canonical	3	695	junction_10	115.762509810758	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTTTAAAAACATTTGA	2722	False	NA	26	True	AATAAA	-34	NA	20188146	20216026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.30	chr10	+	8432	8	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	12	intron_retention	FALSE	canonical	3	695	junction_6	136.209772192807	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTTTTAAAAACATTT	2793	False	NA	24	True	AATAAA	-32	NA	20188217	20216024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20199615_20200885_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.31	chr10	+	6573	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	221	junction_3	220.051346374709	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2793	False	NA	14	True	AATAAA	-15	NA	20188217	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.32	chr10	+	3349	14	NNC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	346.457149172907	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2793	False	NA	9	True	AATAAA	-17	NA	20188217	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20189148_20189291_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.33	chr10	+	9009	10	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	695	junction_8	126.246183171738	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTAACTATCAAC	2793	False	NA	10	True	AATAAA	-18	NA	20188217	20216010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.34	chr10	+	3716	12	NNC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	-1	intron_retention	FALSE	canonical	2	18	junction_5	308.302229091536	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATATTTGTAACTATC	2793	False	NA	7	True	AATAAA	-15	NA	20188217	20216007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20200927_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20209319_20215454_20215668_20215797
ES.2424.36	chr10	+	5737	13	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_9	332.744104213567	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2793	False	NA	16	True	AATAAA	-17	NA	20188217	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.37	chr10	+	4497	13	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	17	intron_retention	FALSE	canonical	3	15	junction_9	333.627401535838	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	2793	False	NA	29	True	AATAAA	-37	NA	20188217	20216029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.38	chr10	+	8697	10	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	221	junction_3	238.414567870421	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATAGCTGGTCTCTGTTT	2793	False	NA	12	True	AATAAA	-13	NA	20188217	20218243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.4	chr10	+	3248	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	-68	2127	-68	108	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCCTCCCTGTTAATA	2722	False	NA	120	True	NA	NA	NA	20188146	20216120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.40	chr10	+	7423	8	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_6	239.388165700711	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2793	False	NA	8	True	AATAAA	-16	NA	20188217	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20205141_20207831_20209319_20215454_20215668_20215797
ES.2424.42	chr10	+	2959	10	ISM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	3	8611	0	0	5prime_fragment	FALSE	canonical	3	760	junction_3	83.8212383587835	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTGCTGTTTTTGTTTT	2793	False	NA	NA	False	ATTAAA	-19	NA	20188217	20209636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137
ES.2424.43	chr10	+	3367	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	27	intron_retention	FALSE	canonical	3	695	junction_10	114.656367658443	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGACTGTTTTTGTTAC	2793	False	NA	39	True	TTTAAA	-3	NA	20188217	20216039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.44	chr10	+	5583	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-65	-2376	0	138	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTCTTAATTGCTT	2793	False	NA	15	True	GATAAA	-15	NA	20188217	20218385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.45	chr10	+	4057	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	695	junction_10	110.333454012734	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATATTTGTAACTATC	2793	False	NA	7	True	AATAAA	-15	NA	20188217	20216007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.47	chr10	+	3458	12	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	395	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTTTTTCTGAAAGC	2793	False	NA	NA	False	ATTAAA	-14	NA	20188217	20216407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.48	chr10	+	3498	13	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_9	332.744104213567	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2793	False	NA	8	True	AATAAA	-16	NA	20188217	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.49	chr10	+	3190	11	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_9	203.215255332861	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2793	False	NA	9	True	AATAAA	-17	NA	20188217	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.5	chr10	+	3369	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-59	2127	-44	106	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGCCTCCCTGTTAA	2746	False	NA	118	True	NA	NA	NA	20188170	20216118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.50	chr10	+	3630	15	NNC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_11	411.560742658917	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGACTGTTTTTGTTAC	2793	False	NA	39	True	TTTAAA	-3	NA	20188217	20216039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205058_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.52	chr10	+	3573	13	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	0	11	intron_retention	FALSE	canonical	3	21	junction_5	355.844642677422	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAACTTTTAAAAACATT	2793	False	NA	23	True	AATAAA	-31	NA	20188217	20216023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.53	chr10	+	3255	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_6	365.903599035295	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2793	False	NA	8	True	AATAAA	-16	NA	20188217	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201367_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.54	chr10	+	3455	14	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	415.676578305152	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2793	False	NA	8	True	AATAAA	-16	NA	20188217	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.55	chr10	+	5299	12	NNC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.354898693676	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2793	False	NA	13	True	AATAAA	-14	NA	20188217	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188344_20193748_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.56	chr10	+	3807	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	1641	1	592	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAACAAAACTACAAT	2794	False	NA	NA	False	AGTAAA	-33	NA	20188218	20216604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.58	chr10	+	5352	11	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	15	junction_8	380.701050694636	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2794	False	NA	8	True	AATAAA	-16	NA	20188218	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.59	chr10	+	5503	12	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	15	junction_8	342.7724108207	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTAACTATCAACTT	2794	False	NA	12	True	AATAAA	-20	NA	20188218	20216012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.6	chr10	+	5349	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	-40	-2	-40	2	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCTGTTTGCCTGA	2750	False	NA	18	True	AATAAA	-19	NA	20188174	20218249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.60	chr10	+	5838	15	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	393.101514904749	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.61	chr10	+	3069	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	2234	1	1	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTAACTATCAACTTT	2794	False	NA	13	True	AATAAA	-21	NA	20188218	20216013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.62	chr10	+	3338	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	252.805631859735	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188477_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.63	chr10	+	3617	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-64	-411	1	408	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAAACAATGGCTTG	2794	False	NA	NA	False	ATTAAA	-27	NA	20188218	20216420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.64	chr10	+	5610	14	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	323.935525764111	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.65	chr10	+	3562	13	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	21	junction_5	328.080613399952	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATATTTGTAACTATC	2794	False	NA	7	True	AATAAA	-15	NA	20188218	20216007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.66	chr10	+	4984	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	326.287599569975	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198708_20199615_20200885_20200927_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.67	chr10	+	4564	13	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	21	junction_6	358.798332013341	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.68	chr10	+	4969	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	251.158687666846	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20200927_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.69	chr10	+	5691	14	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	415.676578305152	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.7	chr10	+	4449	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-44	1032	-29	-1032	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAAGTGTTTATCATA	2761	False	NA	NA	False	ATTAAA	-17	NA	20188185	20217213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.70	chr10	+	5685	14	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	423.603588275642	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.71	chr10	+	3072	12	NNC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.619328194038	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATATTTGTAACTATC	2794	False	NA	7	True	AATAAA	-15	NA	20188218	20216007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.72	chr10	+	3345	12	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	12	intron_retention	FALSE	canonical	3	221	junction_3	218.250254418452	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTTTTAAAAACATTT	2794	False	NA	24	True	AATAAA	-32	NA	20188218	20216024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.73	chr10	+	4984	14	NNC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_11	391.60638673313	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20200927_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.74	chr10	+	5186	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	117	1	-115	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATCCAATGGGAATG	2794	False	NA	NA	False	ATTAAA	-15	NA	20188218	20218130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.75	chr10	+	5066	11	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1	2	intron_retention	FALSE	canonical	3	221	junction_3	276.913506351713	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAACTATCAACTTTT	2794	False	NA	14	True	AATAAA	-22	NA	20188218	20216014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.76	chr10	+	3275	14	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	332.275105239815	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATATTTGTAACTATCA	2794	False	NA	8	True	AATAAA	-16	NA	20188218	20216008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208251_20208316_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.77	chr10	+	3720	14	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	15	junction_10	408.774268229868	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.78	chr10	+	3434	14	NIC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	347.991345196056	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.79	chr10	+	3987	12	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	308.660475694894	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20198820_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.8	chr10	+	4588	13	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	-2	22	intron_retention	FALSE	canonical	3	15	junction_10	422.335857332632	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTTGACTGTTTTT	2788	False	NA	34	True	AATAAA	-42	NA	20188212	20216034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20215454_20215668_20215797
ES.2424.80	chr10	+	3053	12	NNC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	347.519997640899	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2794	False	NA	9	True	AATAAA	-17	NA	20188218	20216009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201681_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.81	chr10	+	9806	9	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	695	junction_7	132.634837052714	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2794	False	NA	14	True	AATAAA	-15	NA	20188218	20218245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.82	chr10	+	5020	13	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	265.606891539608	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2794	False	NA	16	True	AATAAA	-17	NA	20188218	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197852_20199127_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.83	chr10	+	3313	13	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	17	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	354.997994908265	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAAACATTTGACTG	2794	False	NA	29	True	AATAAA	-37	NA	20188218	20216029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.84	chr10	+	5215	12	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	695	junction_10	115.192974992416	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTAACTATCAAC	2794	False	NA	10	True	AATAAA	-18	NA	20188218	20216010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.85	chr10	+	4781	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.139078756753	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.86	chr10	+	5456	13	NNC	ENSMUSG00000037608.17	novel	3142	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	307.051965833509	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.87	chr10	+	3468	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	4	1835	1	400	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTCTGAAAGCAAACA	2794	False	NA	NA	False	ATTAAA	-19	NA	20188218	20216412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.88	chr10	+	7574	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-64	-4368	1	18	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGCTGTTCCAGTGAAG	2794	False	NA	NA	False	ATTAAA	-31	NA	20188218	20220377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.90	chr10	+	5294	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	303.715585745601	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215803
ES.2424.91	chr10	+	5009	14	NIC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	14	intron_retention	FALSE	canonical	3	11	junction_13	370.850677297576	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTTGGCTGTTCCAGT	2794	False	NA	NA	False	ATTAAA	-27	NA	20188218	20220373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831_20209319_20210244_20210392_20215454_20215668_20215797_20215879_20219803
ES.2424.92	chr10	+	5450	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	-2	1	0	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2794	False	NA	16	True	AATAAA	-17	NA	20188218	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.93	chr10	+	5122	11	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	325.416041399314	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203937_20207907_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.94	chr10	+	5426	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	298.89830770198	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTGGTCTCTGTTTG	2794	False	NA	13	True	AATAAA	-14	NA	20188218	20218244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188477_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.2424.95	chr10	+	2821	10	NIC	ENSMUSG00000037608.17	novel	3164	13	NA	NA	1	143	intron_retention	FALSE	canonical	3	21	junction_6	396.11505374382	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTGTCTTTTACACGG	2794	False	NA	NA	False	ATTAAA	-23	NA	20188218	20208147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20202909_20203138_20203847_20203954_20205055_20205141_20207831
ES.2424.96	chr10	+	5134	15	NNC	ENSMUSG00000037608.17	novel	5437	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_11	363.590856904419	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2794	False	NA	16	True	AATAAA	-17	NA	20188218	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20200927_20201404_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.97	chr10	+	7578	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	-11	-2130	1	16	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGGCTGTTCCAGTGA	2794	False	NA	NA	False	ATTAAA	-29	NA	20188218	20220375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ES.2424.99	chr10	+	5312	12	NNC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.619328194038	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2794	False	NA	16	True	AATAAA	-17	NA	20188218	20218247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20188351_20193753_20193873_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ES.24240.1	chr4	-	1403	3	NNC	ENSMUSG00000028648.14	novel	599	3	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1053	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGCTTTTGGGTC	1892	False	NA	-26	True	AATAAA	-16	NA	123611935	123606503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123606720_123609656_123609875_123610966
ES.24240.2	chr4	-	461	3	NNC	ENSMUSG00000028648.14	novel	525	3	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	1049	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGCTTTTGGGTC	1872	False	NA	-26	True	AATAAA	-16	NA	123611955	123606503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123606720_123609656_123609852_123611905
ES.24240.3	chr4	-	2531	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	-1852	1	3	-1	multi-exon	FALSE	canonical	3	2108	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTGCTTTTGGGTC	1856	False	NA	-26	True	AATAAA	-16	NA	123611971	123606503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123606720_123609656
ES.24240.4	chr4	-	564	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	27	8	22	-8	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTTAGTCTGTTTGCTT	1875	False	NA	-33	True	AATAAA	-9	NA	123611952	123606510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123606720_123609656_123609875_123611815
ES.24240.5	chr4	-	4552	1	NIC	ENSMUSG00000028648.14	novel	599	3	NA	NA	39	-722	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAAAGTGATTTCCAGT	1892	False	NA	NA	False	NA	NA	NA	123611935	123607383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123607400_123611900
ES.24241.1	chr4	+	2258	2	Antisense	novelGene_ENSMUSG00000023075.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7029	False	NA	NA	False	NA	NA	NA	123637282	123639605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_123637715_123637779
ES.24242.1	chr4	-	7728	5	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-44	2795	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	237.001054849973	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGTATGTGTGAATTG	NA	False	NA	NA	False	NA	NA	NA	123644068	123625556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123631319_123631523_123632814_123632863_123633071_123637225_123637367_123643740
ES.24242.10	chr4	-	4157	4	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-20	-801	intron_retention	TRUE	non_canonical	0	0	junction_1	223.447234636427	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGCCTTCTTGATGC	NA	False	NA	-15	True	AATAAA	-18	NA	123644044	123629152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123631307_123631512_123633071_123637225_123637367_123643740
ES.24242.11	chr4	-	2099	4	NIC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-35	-802	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	223.447234636427	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTTGCCTTCTTGATG	NA	False	NA	-16	True	AATAAA	-17	NA	123644059	123629153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_123630658_123632935_123633071_123637225_123637367_123643740
ES.24242.12	chr4	-	2162	5	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-38	-804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	217.240649971408	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACCTTGCCTTCTTGA	NA	False	NA	-18	True	AATAAA	-15	NA	123644062	123629155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123630658_123631801_123631864_123632935_123633071_123637225_123637367_123643740
ES.24242.15	chr4	-	1086	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	72	1894	-42	1361	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTGGCTGTGAATTTG	NA	False	NA	NA	False	NA	NA	NA	123644066	123630245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.16	chr4	-	868	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	62	2122	-52	1133	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCATATCTTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	123644076	123630473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.2	chr4	-	5760	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	84	-2792	-30	2792	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGGTGTATGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	123644054	123625559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.3	chr4	-	3014	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	41	-3	41	3	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATTGGAATGTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	123644097	123628348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.4	chr4	-	2388	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	29	635	29	-635	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTCATCGCTTCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	123644109	123628986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.5	chr4	-	4266	5	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-20	-642	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	237.001054849973	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACAGTTTGTTTCATC	NA	False	NA	NA	False	ATTAAA	-18	NA	123644044	123628993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123631318_123631523_123632814_123632863_123633071_123637225_123637367_123643740
ES.24242.6	chr4	-	2230	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	30	792	30	-792	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGATGCTGTGATGAT	NA	False	NA	-6	True	AATAAA	-27	NA	123644108	123629143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ES.24242.8	chr4	-	3199	5	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-48	-799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	217.240649971408	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCCTTCTTGATGCTG	NA	False	NA	-13	True	AATAAA	-20	NA	123644072	123629150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123630658_123631801_123632814_123632863_123633071_123637225_123637367_123643740
ES.24242.9	chr4	-	3130	5	NNC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	-56	-801	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	221.101079825495	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTGCCTTCTTGATGC	NA	False	NA	-15	True	AATAAA	-18	NA	123644080	123629152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_123631307_123631513_123631874_123632935_123633071_123637225_123637367_123643740
ES.24243.1	chr4	+	158	1	Intergenic	novelGene_19900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	123649128	123649286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123649100_123649300
ES.24244.1	chr4	-	175	1	Intergenic	novelGene_19901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTAGCCAG	NA	False	NA	NA	False	NA	NA	NA	123650525	123650350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123650400_123650500
ES.24245.1	chr4	-	177	1	Intergenic	novelGene_19902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTAAGTTACGC	NA	False	NA	NA	False	NA	NA	NA	123651236	123651059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123651100_123651200
ES.24246.1	chr4	-	173	1	Intergenic	novelGene_19903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	9989	False	NA	NA	False	NA	NA	NA	123655518	123655345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123655300_123655500
ES.24247.1	chr4	-	208	1	Intergenic	novelGene_19904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAGTTAATAATATCA	4914	False	NA	NA	False	AAAAAG	-8	NA	123660593	123660385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123660400_123660600
ES.24248.1	chr4	-	170	1	Intergenic	novelGene_19905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTATGG	NA	False	NA	NA	False	NA	NA	NA	123702173	123702003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123702000_123702200
ES.24249.1	chr4	+	5485	6	NIC	ENSMUSG00000043333.13	novel	1120	7	NA	NA	-9	290	intron_retention	FALSE	canonical	3	18	junction_5	3.54400902933387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTGTGCTGGACTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	123703697	123723987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ES.24249.2	chr4	+	1505	8	NNC	ENSMUSG00000043333.13	novel	1217	8	NA	NA	17	296	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	9.61928335401853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGGACTCTTGCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	123703723	123723993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123703970_123707423_123707530_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ES.24249.3	chr4	+	1385	7	FSM	ENSMUSG00000043333.13	ENSMUST00000106204.2	1120	7	26	-291	26	291	multi-exon	FALSE	canonical	3	17	junction_1	3.97562014729219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTGCTGGACTCTTG	NA	False	NA	NA	False	AATAAA	-13	NA	123703732	123723988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ES.2425.1	chr10	-	1695	1	Antisense	novelGene_ENSMUSG00000037608.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20190839	20189144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_20189100_20190800
ES.24250.1	chr4	-	177	1	Intergenic	novelGene_19906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5785	False	NA	NA	False	NA	NA	NA	123712418	123712241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_123712200_123712400
ES.24251.1	chr4	+	569	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	164	952	-45	75	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTCTTAAAGCAGGAG	NA	False	NA	11	True	AATAAA	-18	NA	123798788	123805110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.10	chr4	+	569	4	FSM	ENSMUSG00000028647.14	ENSMUST00000137685.2	500	4	-1	-68	-1	68	multi-exon	FALSE	canonical	3	284	junction_3	24.8596057893121	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTCTTTGGGTCTTAAA	NA	False	NA	4	True	AATAAA	-11	NA	123798927	123805103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.11	chr4	+	3295	4	FSM	ENSMUSG00000028647.14	ENSMUST00000137685.2	500	4	6	-2801	6	1774	multi-exon	FALSE	canonical	3	284	junction_3	24.8596057893121	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTGCAAACTATAAAGG	NA	False	NA	NA	False	NA	NA	NA	123798934	123807836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.12	chr4	+	1500	4	FSM	ENSMUSG00000028647.14	ENSMUST00000137685.2	500	4	8	-1008	8	-19	multi-exon	FALSE	canonical	3	284	junction_3	24.8596057893121	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTTGTTTTGTTAAT	NA	False	NA	21	True	NA	NA	NA	123798936	123806043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.13	chr4	+	2618	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	-26	1	-26	-1	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTTGTGTGATGTG	NA	False	NA	19	True	AATAAA	-19	NA	123811212	123830789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.14	chr4	+	2391	6	NIC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	214.756047644764	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811229	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123811561_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.15	chr4	+	2978	7	FSM	ENSMUSG00000028646.17	ENSMUST00000155757.8	2950	7	-28	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	186.947779399014	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811238	123830786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123811561_123813641_123814235_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.16	chr4	+	2936	7	NNC	ENSMUSG00000028646.17	novel	2950	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	240.050284084166	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811239	123830786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123813641_123814235_123814743_123814944_123817752_123817868_123818580_123818683_123823624_123823774_123829330
ES.24251.17	chr4	+	2664	8	NNC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	240.118083195646	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811239	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123812932_123813012_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.18	chr4	+	5050	7	NNC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	197.914473672061	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811243	123830786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123826240_123829330
ES.24251.19	chr4	+	2414	6	NIC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-7	-5	combination_of_known_splicesites	FALSE	canonical	2	17	junction_5	203.953524117628	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCAGTGTTTGTTGT	NA	False	NA	11	True	AATAAA	-11	NA	123811259	123830781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123829330
ES.24251.2	chr4	+	1517	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	166	2	-43	-2	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTTCTTTCTTTTTG	NA	False	NA	38	True	NA	NA	NA	123798790	123806060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.20	chr4	+	2562	7	NNC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.751272397256	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811259	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123813641_123813846_123814743_123814956_123817767_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.21	chr4	+	3462	6	NIC	ENSMUSG00000028646.17	novel	2950	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	488	junction_1	25.2697447553393	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811260	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123811561_123813641_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.22	chr4	+	2481	7	NNC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.7564813758	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811260	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123813724_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.23	chr4	+	4645	6	NIC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	506	junction_5	18.4564351920949	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811260	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.24	chr4	+	7509	6	NIC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	488	junction_1	23.6676995079792	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811260	123830786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123823774_123829330
ES.24251.25	chr4	+	2382	7	NNC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197.307219555922	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123811280	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123811561_123813641_123813684_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.26	chr4	+	1577	1	NIC	ENSMUSG00000028646.17	novel	2593	7	NA	NA	14132	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	False	NA	13	True	AATAAA	-13	NA	123829206	123830783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_123829200_123830800
ES.24251.3	chr4	+	2343	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	169	-827	-40	827	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTTTAATGTTATAT	NA	False	NA	NA	False	NA	NA	NA	123798793	123806889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.4	chr4	+	3288	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	171	-1774	-38	1774	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTGCAAACTATAAAGG	NA	False	NA	NA	False	NA	NA	NA	123798795	123807836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.5	chr4	+	2604	10	Fusion	ENSMUSG00000028647.14_ENSMUSG00000028646.17	novel	1685	5	NA	NA	-38	0	multi-exon	FALSE	canonical	2	5	junction_4	170.420250347179	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123798795	123830786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ES.24251.6	chr4	+	4249	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	175	-2739	-34	2739	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGACTGTTGCAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	123798799	123808801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.7	chr4	+	323	4	FSM	ENSMUSG00000028647.14	ENSMUST00000106202.4	1536	4	111	1102	-16	251	multi-exon	FALSE	canonical	3	305	junction_3	15.9652400197707	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATTGAAATTAA	NA	False	NA	NA	False	NA	NA	NA	123798817	123803767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629
ES.24251.8	chr4	+	1480	5	NNC	ENSMUSG00000028647.14	novel	1685	5	NA	NA	-5	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.377005026507	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTTGTTTTGTTAAT	NA	False	NA	21	True	NA	NA	NA	123798828	123806043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_123798881_123799008_123799100_123803426_123803476_123803629_123803760_123804885
ES.24251.9	chr4	+	4505	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	204	-3024	-5	3024	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATTTATTTTTATT	NA	False	NA	NA	False	AAGAAA	-7	NA	123798828	123809086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ES.24252.1	chr4	-	5888	1	FSM	ENSMUSG00000085875.4	ENSMUST00000238344.2	2706	1	755	-3937	1	3937	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGGCTCTTTAGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	123811061	123805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_123805200_123811100
ES.24253.1	chr4	-	6831	1	Antisense	novelGene_ENSMUSG00000082515.2_AS_novelGene_ENSMUSG00000028646.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATTTCTTACACAAAG	NA	False	NA	NA	False	NA	NA	NA	123822102	123815271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_123815300_123822100
ES.24254.1	chr4	+	177	1	Intergenic	novelGene_19907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAAATTTGA	4313	False	NA	NA	False	NA	NA	NA	123952294	123952471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_123952300_123952500
ES.24255.1	chr4	+	182	1	Intergenic	novelGene_19908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAACAATTGCCC	NA	False	NA	NA	False	NA	NA	NA	124180828	124181010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124180800_124181000
ES.24256.1	chr4	-	4626	2	Intergenic	novelGene_19909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCGTCTAGATTCCTC	NA	False	NA	NA	False	NA	NA	NA	124252234	124246937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247180_124247850
ES.24256.10	chr4	-	1430	1	Intergenic	novelGene_19918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTTAAAAATTATGG	NA	False	NA	NA	False	NA	NA	NA	124252214	124250784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124250800_124252200
ES.24256.11	chr4	-	917	1	Intergenic	novelGene_19919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACAATGGTAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	124252212	124251295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124251300_124252200
ES.24256.12	chr4	-	761	1	Intergenic	novelGene_19920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCGAGAGCTGCCAC	NA	False	NA	NA	False	NA	NA	NA	124252211	124251450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124251400_124252200
ES.24256.13	chr4	-	496	1	Intergenic	novelGene_19921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGGGTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	124252213	124251717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124251700_124252200
ES.24256.14	chr4	-	112	1	Intergenic	novelGene_19922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	124252310	124252198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124252200_124252300
ES.24256.2	chr4	-	5269	1	Intergenic	novelGene_19910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	124252229	124246960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247000_124252200
ES.24256.3	chr4	-	454	2	Intergenic	novelGene_19911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	373	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	124252214	124246963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247180_124251976
ES.24256.4	chr4	-	615	3	Intergenic	novelGene_19912	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_1	3	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252232	124246965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247180_124247850_124247996_124251976
ES.24256.5	chr4	-	469	3	Intergenic	novelGene_19913	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	124252214	124246966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247180_124248393_124248412_124251976
ES.24256.6	chr4	-	951	2	Intergenic	novelGene_19914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	124252215	124246966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247214_124251511
ES.24256.7	chr4	-	4095	2	Intergenic	novelGene_19915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	11	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAATTGCCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	124252214	124246967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124247180_124248331
ES.24256.8	chr4	-	3172	1	Intergenic	novelGene_19916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTACTTGTCATTTTTCC	NA	False	NA	NA	False	NA	NA	NA	124252214	124249042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124249000_124252200
ES.24256.9	chr4	-	2179	1	Intergenic	novelGene_19917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATGCTTCTTAAAGTT	NA	False	NA	NA	False	NA	NA	NA	124252215	124250036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124250000_124252200
ES.24257.1	chr4	+	1302	1	Intergenic	novelGene_19923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124290563	124291865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124290600_124291900
ES.24258.1	chr4	-	211	1	Intergenic	novelGene_19924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTCTCTCTCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	124372972	124372761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124372800_124373000
ES.24259.1	chr4	-	6060	8	NNC	ENSMUSG00000098760.2	novel	424	2	NA	NA	83395	5996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGATGTCCTGTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	124467567	124416720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124417375_124418083_124418401_124418531_124418770_124419145_124421766_124422245_124424086_124449837_124449880_124450965_124451178_124467430
ES.2426.1	chr10	-	136	1	Antisense	novelGene_ENSMUSG00000037608.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCACTGA	NA	False	NA	NA	False	NA	NA	NA	20191131	20190995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_20191000_20191100
ES.24260.1	chr4	+	127	1	Intergenic	novelGene_19925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTAAAGAAATGCATCC	NA	False	NA	NA	False	NA	NA	NA	124485121	124485248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124485100_124485200
ES.24261.1	chr4	+	3063	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	786	0	786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTGTTCTCTTTA	NA	False	NA	28	True	AGTAAA	-34	NA	124551385	124554448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124551400_124554400
ES.24261.2	chr4	+	1588	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	798	1463	798	-1463	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCAGAAACTTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	124551397	124552985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124551400_124553000
ES.24261.3	chr4	+	2196	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	848	805	848	-805	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124551447	124553643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124551400_124553600
ES.24261.4	chr4	+	2479	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	848	522	848	-522	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTTGCGCCTGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	124551447	124553926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124551400_124553900
ES.24261.5	chr4	+	2754	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	848	247	848	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGACCCATCTCTAT	NA	False	NA	NA	False	AAAAAG	-21	NA	124551447	124554201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124551400_124554200
ES.24262.1	chr4	+	225	1	Intergenic	novelGene_19926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTTTGAAAATAACACTG	NA	False	NA	NA	False	AAAAAG	-32	NA	124563524	124563749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124563500_124563700
ES.24263.1	chr4	+	230	1	Intergenic	novelGene_19927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGCACTGAGCCACAC	NA	False	NA	NA	False	NA	NA	NA	124584242	124584472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124584200_124584500
ES.24264.1	chr4	+	1506	5	NIC	ENSMUSG00000032643.13	novel	1664	6	NA	NA	5	-246	intron_retention	FALSE	canonical	1	2	junction_2	2.12132034355964	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCTAAGAAGTCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	124594517	124602158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124594645_124599405_124599583_124599676_124599852_124601046_124601524_124601608
ES.24265.1	chr4	+	1809	18	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-5565	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	483.288382748493	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCAGCCCTTGTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	124603003	124626211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124603030_124608551_124608784_124609061_124609110_124609444_124609498_124609602_124609701_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622028_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.10	chr4	+	2783	16	NIC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-51	-6	intron_retention	FALSE	canonical	3	1114	junction_11	90.0693559924178	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAGTTTATGAATTT	NA	False	NA	45	True	AATAAA	-32	NA	124608624	124626247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.11	chr4	+	1678	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-42	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493.370704788752	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCAGCCCTTGT	NA	False	NA	6	True	ATTAAA	-13	NA	124608633	124626208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124608784_124609061_124609110_124609461_124609498_124609602_124609727_124610273_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618554_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.13	chr4	+	3552	16	NIC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-38	-20	intron_retention	FALSE	canonical	3	1027	junction_12	101.749365272386	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTTCTGAAACCC	NA	False	NA	31	True	AATAAA	-18	NA	124608637	124626233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124625220_124625980
ES.24265.14	chr4	+	1669	16	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-27	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	326.022044244455	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTTCTGAAACCC	NA	False	NA	31	True	AATAAA	-18	NA	124608648	124626233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124608784_124609061_124609110_124609600_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.19	chr4	+	1617	16	NIC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-18	-45	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	330.712053336769	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCAGCCCTTGT	NA	False	NA	6	True	ATTAAA	-13	NA	124608657	124626208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.2	chr4	+	179	1	Intergenic	novelGene_19930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	124607865	124608044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124607900_124608000
ES.24265.20	chr4	+	2954	15	NIC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	-10	-46	intron_retention	FALSE	canonical	3	1027	junction_11	103.798986468254	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAAGCCAGCCCTTG	NA	False	NA	5	True	ATTAAA	-12	NA	124608665	124626207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618976_124620771_124620842_124621866_124622032_124622111_124623343_124625163_124625220_124625980
ES.24265.22	chr4	+	1712	16	ISM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	341	45	234	-45	3prime_fragment	FALSE	canonical	3	1027	junction_11	106.483467678738	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCAGCCCTTGT	NA	False	NA	6	True	ATTAAA	-13	NA	124608909	124626208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.23	chr4	+	1006	9	ISM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	8894	6	1937	-6	3prime_fragment	FALSE	canonical	3	1027	junction_4	134.988830556458	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAGTTTATGAATTT	NA	False	NA	45	True	AATAAA	-32	NA	124617462	124626247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.3	chr4	+	1818	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	3	-1	3	1	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATGAATTTTTTGTTT	NA	False	NA	52	True	AATAAA	-39	NA	124608571	124626254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.4	chr4	+	1754	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	18	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	318.074032017312	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAAGCCAGCCCTTG	NA	False	NA	5	True	ATTAAA	-12	NA	124608586	124626207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620846_124621872_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.5	chr4	+	3828	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	41	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	319.568941847843	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCAGCCCTTGT	NA	False	NA	6	True	ATTAAA	-13	NA	124608609	124626208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124614307_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ES.24265.9	chr4	+	2759	16	NIC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	53	-37	intron_retention	FALSE	canonical	3	1027	junction_12	104.605799711743	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCCTTGTTTTGGATG	NA	False	NA	14	True	AATAAA	-1	NA	124608621	124626216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124623343_124625163_124625220_124625980
ES.24266.1	chr4	-	2314	9	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	26	779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.029968342109	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATCTTCATCTTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	124587367	124571173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124571878_124571919_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.10	chr4	-	3618	7	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	18	290	intron_retention	FALSE	canonical	3	1259	junction_3	141.491656605218	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTGATGATTGA	NA	False	NA	NA	False	AGTAAA	-20	NA	124587375	124572299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.11	chr4	-	3586	6	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	-30	187	intron_retention	FALSE	canonical	3	1259	junction_2	154.706690223791	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	124587357	124572402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.12	chr4	-	1147	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	6	450	6	187	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	124587387	124572402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.13	chr4	-	1034	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	1	568	1	69	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGTGGTCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	124587392	124572520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.14	chr4	-	1082	7	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	6	33	intron_retention	FALSE	canonical	3	1259	junction_3	145.347189706425	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGATGTCTTTCTATG	NA	False	NA	NA	False	NA	NA	NA	124587387	124572556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124573606_124575985_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.15	chr4	-	3948	6	NNC	ENSMUSG00000028907.8	novel	4008	6	NA	NA	6	32	intron_retention	FALSE	non_canonical	0	0	junction_2	608.117291318048	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTGATGTCTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	124587387	124572557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124575644_124575884_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.16	chr4	-	3124	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	12	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	520.079507265525	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTTGATGTCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	124587381	124572558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124575644_124575884_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.17	chr4	-	973	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	-28	28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	512.374862771389	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGACTTGATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	124587355	124572561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124573606_124575985_124576134_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.18	chr4	-	931	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	515.414317192826	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTAATCATGACTTA	NA	False	NA	NA	False	NA	NA	NA	124587388	124572587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124573606_124575985_124576085_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.2	chr4	-	2374	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	7	-778	7	778	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGATCTTCATCTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	124587386	124571174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.20	chr4	-	1501	6	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	7414	-2	intron_retention	FALSE	canonical	3	1343	junction_1	137.389082535695	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTTGTAATCATGA	NA	False	NA	NA	False	NA	NA	NA	124579913	124572591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124577142_124577545_124577649_124579881
ES.24266.21	chr4	-	3329	7	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	5	-12	intron_retention	FALSE	canonical	3	1259	junction_3	141.491656605218	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTGGTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	124587388	124572601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.22	chr4	-	3411	6	NIC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	9	-15	intron_retention	FALSE	canonical	3	1259	junction_2	154.706690223791	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTTGGTCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	124587384	124572604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124572780_124573494_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.23	chr4	-	4289	5	NNC	ENSMUSG00000028907.8	novel	4008	6	NA	NA	22	-15	intron_retention	FALSE	non_canonical	0	0	junction_2	612.593054155856	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTTGGTCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	124587371	124572604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124575644_124575884_124577649_124579881_124579944_124587232
ES.24266.24	chr4	-	4024	6	FSM	ENSMUSG00000028907.8	ENSMUST00000153088.2	4008	6	-31	15	-31	-15	multi-exon	FALSE	canonical	3	1343	junction_1	127.692443002709	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTTGGTCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	124587358	124572604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124576117_124576205_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.25	chr4	-	870	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	42	691	-24	-54	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGTCTTTTGTAATAA	NA	False	NA	NA	False	NA	NA	NA	124587351	124572643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.26	chr4	-	232	1	ISM	ENSMUSG00000028907.8	ENSMUST00000153088.2	4008	6	11448	3058	11448	-3058	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTGACAGAGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	124575879	124575647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_124575600_124575900
ES.24266.27	chr4	-	159	2	NNC	ENSMUSG00000028907.8	novel	4008	6	NA	NA	-27795	-3128	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124615188	124575717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124575828_124615139
ES.24266.28	chr4	-	163	1	Intergenic	novelGene_19928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGACACACA	NA	False	NA	NA	False	NA	NA	NA	124596886	124596723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124596700_124596900
ES.24266.29	chr4	-	157	1	Intergenic	novelGene_19929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	124606085	124605928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124605900_124606100
ES.24266.3	chr4	-	4404	9	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	6	742	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	708.040253093	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGTCTTAAGAATTAAA	NA	False	NA	NA	False	AAAACA	-12	NA	124587387	124571210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124571878_124571919_124572780_124573494_124575644_124575884_124576085_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.30	chr4	-	159	1	Intergenic	novelGene_19931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	124615190	124615031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124615000_124615200
ES.24266.4	chr4	-	1989	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	141	-527	75	527	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	124587252	124571425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.5	chr4	-	2080	9	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	12	527	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.029968342109	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	124587381	124571425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124571878_124571915_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.6	chr4	-	1589	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	14	0	14	0	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	124587379	124571952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.8	chr4	-	1545	8	NNC	ENSMUSG00000028907.8	novel	1603	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	515.414317192826	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	124587367	124571952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124572780_124573494_124573606_124575985_124576085_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24266.9	chr4	-	1251	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	5	347	5	290	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTGATGATTGA	NA	False	NA	NA	False	AGTAAA	-20	NA	124587388	124572299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ES.24267.1	chr4	+	3855	24	FSM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	-46	0	-46	0	multi-exon	FALSE	non_canonical	1	6	junction_2	64.214933278441	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124635596	124695304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.10	chr4	+	3090	18	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9691	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.9671944391635	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124645361	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685229_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.11	chr4	+	3065	19	ISM	ENSMUSG00000028894.19	ENSMUST00000184454.8	3834	25	9708	-5	9702	-1	3prime_fragment	FALSE	canonical	0	0	junction_14	54.5519629955391	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	21	True	AATATA	-29	NA	124645372	124695303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124687394_124687448_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.12	chr4	+	4763	18	NIC	ENSMUSG00000028894.19	novel	3834	25	NA	NA	9706	0	intron_retention	FALSE	canonical	1	1	junction_13	43.767947381538	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645376	124695304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124687394_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.13	chr4	+	2984	18	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9708	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	43.9546006740503	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124645378	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693580_124693673_124694498
ES.24267.14	chr4	+	5209	16	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9709	3	intron_retention	FALSE	canonical	3	118	junction_11	23.1242056920641	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124645379	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124687203_124689148_124689263_124691617_124691703_124692044_124693673_124694498
ES.24267.15	chr4	+	2762	16	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9723	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	59.9749577370052	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	21	True	AATATA	-29	NA	124645393	124695303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124694498
ES.24267.16	chr4	+	2998	18	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9726	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	44.0426814064168	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124645396	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678953_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.17	chr4	+	5744	16	NIC	ENSMUSG00000028894.19	novel	3834	25	NA	NA	9730	1	intron_retention	FALSE	canonical	3	118	junction_11	24.3524126114847	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTATGGTTCTCTCTT	NA	False	NA	17	True	AATATA	-25	NA	124645400	124695299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.18	chr4	+	3185	20	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9737	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.7936824453532	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	21	True	AATATA	-29	NA	124645407	124695303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124645486_124669389_124669500_124671133_124671231_124672891_124672990_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.19	chr4	+	2919	18	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9737	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.2433503302237	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTATGGTTCTCTCTT	NA	False	NA	17	True	AATATA	-25	NA	124645407	124695299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680369_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.2	chr4	+	3822	24	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	74.6312421592873	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124635605	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124635710_124636234_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678953_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124693373_124693447_124693560_124693673_124694498
ES.24267.20	chr4	+	2761	16	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9738	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	43.9794901693455	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124645408	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124693560_124693673_124694498
ES.24267.21	chr4	+	4696	16	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9749	0	intron_retention	FALSE	canonical	3	118	junction_11	22.3870994597831	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645419	124695304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124693673_124694498
ES.24267.23	chr4	+	3068	19	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9757	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.9004711126878	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645427	124695304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124645486_124669389_124669500_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.27	chr4	+	3365	4	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	-2267	-2	intron_retention	FALSE	canonical	3	124	junction_3	29.044027881056	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGGTTCTCTCTTTTT	NA	False	NA	20	True	AATATA	-28	NA	124686810	124695302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124687203_124689148_124689263_124691617_124693673_124694498
ES.24267.28	chr4	+	4561	4	NIC	ENSMUSG00000028894.19	novel	3834	25	NA	NA	-1860	3	intron_retention	FALSE	canonical	3	124	junction_3	32.3144274623924	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124687217	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124689263_124691617_124691703_124692044_124693673_124694498
ES.24267.29	chr4	+	4560	3	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	-1515	-1	intron_retention	FALSE	canonical	3	124	junction_2	35	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	21	True	AATATA	-29	NA	124687562	124695303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124689263_124691617_124693673_124694498
ES.24267.4	chr4	+	3903	25	NNC	ENSMUSG00000028894.19	novel	3834	25	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_9	70.1152696754899	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124635643	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124672891_124672990_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.5	chr4	+	3818	24	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.0802132908857	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124635656	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124635710_124636234_124636384_124636725_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645487_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.6	chr4	+	5735	23	NNC	ENSMUSG00000028894.19	novel	3834	25	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	65.3436718783499	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTCTCTCTTTTTT	NA	False	NA	21	True	AATATA	-29	NA	124635657	124695303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124635710_124636256_124636384_124636732_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.7	chr4	+	3733	23	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	586	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	66.6699654831219	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGGTTCTCTCTTTTT	NA	False	NA	20	True	AATATA	-28	NA	124636256	124695302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676189_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ES.24267.8	chr4	+	5067	22	NIC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	646	3	intron_retention	FALSE	non_canonical	1	6	junction_1	63.0748754203847	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGGTTCTCTCTTTT	NA	False	NA	19	True	AATATA	-27	NA	124636316	124695301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124693673_124694498
ES.24267.9	chr4	+	2740	13	ISM	ENSMUSG00000028894.19	ENSMUST00000184454.8	3834	25	9697	7135	9691	-3524	intron_retention	FALSE	canonical	3	118	junction_11	20.2750188381883	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGAGGTCTCGAGTT	NA	False	NA	NA	False	NA	NA	NA	124645361	124688163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966
ES.24268.1	chr4	-	1558	1	Intergenic	novelGene_19932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124648461	124646903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124646900_124648500
ES.24269.1	chr4	-	261	1	Intergenic	novelGene_19933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTCCTCCATAAGTACT	NA	False	NA	NA	False	NA	NA	NA	124656472	124656211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124656200_124656500
ES.2427.1	chr10	-	231	1	Intergenic	novelGene_1851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20225203	20224972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20225000_20225200
ES.24270.11	chr4	+	2697	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-14	-4488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.2991467452552	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	338	False	NA	8	True	CATAAA	-12	NA	124696360	124738684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731496_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.12	chr4	+	2685	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-12	-4488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.668838871786	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	340	False	NA	8	True	CATAAA	-12	NA	124696362	124738684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732127_124732711_124736320_124736385_124737939
ES.24270.13	chr4	+	788	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	-10	3	-10	-3	multi-exon	FALSE	canonical	3	116	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAGTGAATTCATGTTT	342	False	NA	1	True	AATAAA	-12	NA	124696364	124699168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124696437_124698452
ES.24270.15	chr4	+	5709	10	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.1261868235227	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGGTAGTACATGT	346	False	NA	NA	False	ATTAAA	-30	NA	124696368	124743167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732306_124738939
ES.24270.16	chr4	+	2159	10	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-5	-10042	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	31.1261868235227	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAAAGT	347	False	NA	NA	False	AGTAAA	-44	NA	124696369	124733130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732801_124732946
ES.24270.17	chr4	+	2618	12	NNC	ENSMUSG00000028890.14	novel	7554	12	NA	NA	-5	-4488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.3306918230663	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	347	False	NA	8	True	CATAAA	-12	NA	124696369	124738684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698587_124698662_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.18	chr4	+	3626	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	-3	-3560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.3280576079717	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGCTCCTGGTTAT	349	False	NA	NA	False	TATAAA	-17	NA	124696371	124739612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698913_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718978_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.2	chr4	+	2747	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	-8	4892	-8	-4471	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGGTACTGCCCATC	311	False	NA	25	True	CATAAA	-29	NA	124696333	124738701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.21	chr4	+	2226	10	NNC	ENSMUSG00000028890.14	novel	7554	12	NA	NA	15382	-4472	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	28.5034111019093	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTTGGTACTGCCCAT	2673	False	NA	24	True	CATAAA	-28	NA	124711852	124738700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124711892_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.22	chr4	+	2212	7	ISM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	21329	4906	21200	-4485	3prime_fragment	FALSE	canonical	3	78	junction_1	7.28964257620968	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGTTTCCATCACTT	2826	False	NA	11	True	CATAAA	-15	NA	124717670	124738687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.23	chr4	+	1701	6	NNC	ENSMUSG00000028890.14	novel	7554	12	NA	NA	22571	-4490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.3056896807207	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGGTGTGGTTTCCAT	4197	False	NA	6	True	CATAAA	-10	NA	124719041	124738682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124719162_124724911_124724990_124731496_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.3	chr4	+	5488	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	-1	2144	-1	-1723	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTTACTTGGGTGCAA	318	False	NA	NA	False	AATAAA	-22	NA	124696340	124741449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.4	chr4	+	7004	9	NIC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.8899680753874	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACATGTGGCATTACTT	319	False	NA	NA	False	ATTAAA	-40	NA	124696341	124743177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.5	chr4	+	2617	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	1	5013	1	-4592	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGTTATAAGTGAACTG	320	False	NA	-96	True	NA	NA	NA	124696342	124738580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.6	chr4	+	2716	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	9	-4488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	29.7053867168903	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	328	False	NA	8	True	CATAAA	-12	NA	124696350	124738684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736317_124736385_124737939
ES.24270.7	chr4	+	7205	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	10	416	10	5	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACATGTGGCATTACTT	329	False	NA	NA	False	ATTAAA	-40	NA	124696351	124743177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.8	chr4	+	3494	10	NIC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	12	-4488	intron_retention	FALSE	canonical	3	78	junction_4	11.2150692275071	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGTGGTTTCCATCA	331	False	NA	8	True	CATAAA	-12	NA	124696353	124738684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124696437_124698452_124698909_124713997_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ES.24270.9	chr4	+	4257	7	ISM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	15	15543	15	14030	5prime_fragment	FALSE	canonical	3	78	junction_5	13.3124836984772	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAGAAAGAAA	334	False	NA	NA	False	NA	NA	NA	124696356	124728050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911
ES.24271.1	chr4	+	1573	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	66	-5	66	5	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTTATTTTTCTTTT	1600	False	NA	48	True	ATTAAA	-23	NA	124744537	124749040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ES.24271.10	chr4	+	1239	5	NNC	ENSMUSG00000028889.18	novel	724	4	NA	NA	-85	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.084768595538	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTAAATGGTTTATTTT	2121	False	NA	42	True	ATTAAA	-17	NA	124745058	124749034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124745153_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ES.24271.11	chr4	+	1529	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-38	-767	-38	3	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGGTTTATTTTTCTT	2168	False	NA	46	True	ATTAAA	-21	NA	124745105	124749038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
ES.24271.2	chr4	+	1407	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	68	159	68	-159	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTGGTATAGTTTTA	1602	False	NA	34	True	AATAAA	-31	NA	124744539	124748876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ES.24271.3	chr4	+	4491	1	NIC	ENSMUSG00000028889.18	novel	1634	5	NA	NA	68	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTGTAAATGGTTTA	1602	False	NA	38	True	ATTAAA	-13	NA	124744539	124749030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124744500_124749000
ES.24271.4	chr4	+	2010	3	FSM	ENSMUSG00000028889.18	ENSMUST00000173434.2	512	3	-1148	-350	68	-174	multi-exon	FALSE	canonical	3	545	junction_2	21	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGGTGACTTTCTAATTT	1602	False	NA	19	True	AATAAA	-16	NA	124744539	124748861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124745813_124747666_124747810_124748267
ES.24271.5	chr4	+	4024	2	NIC	ENSMUSG00000028889.18	novel	512	3	NA	NA	79	-3	intron_retention	FALSE	canonical	3	545	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGTAAATGGTTTATT	1613	False	NA	40	True	ATTAAA	-15	NA	124744550	124749032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124747810_124748267
ES.24271.7	chr4	+	1904	4	FSM	ENSMUSG00000028889.18	ENSMUST00000144851.3	724	4	-587	-593	85	-171	multi-exon	FALSE	canonical	3	495	junction_1	37.6061460697879	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGACTTTCTAATTTATT	1619	False	NA	22	True	AATAAA	-19	NA	124744556	124748864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124745601_124745692_124745813_124747666_124747810_124748267
ES.24271.9	chr4	+	3363	4	NIC	ENSMUSG00000028889.18	novel	1634	5	NA	NA	120	-5	intron_retention	FALSE	canonical	3	475	junction_1	29.4392028877595	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTGTAAATGGTTTA	1654	False	NA	38	True	ATTAAA	-13	NA	124744591	124749030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124744960_124745485_124745601_124745692_124747810_124748267
ES.24272.1	chr4	-	176	1	Intergenic	novelGene_19934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCCAGAACCACGGGG	NA	False	NA	NA	False	NA	NA	NA	124719766	124719590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124719600_124719800
ES.24273.1	chr4	-	3580	1	Intergenic	novelGene_19935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGACCAAACTGCCTAA	NA	False	NA	NA	False	NA	NA	NA	124723829	124720249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124720200_124723800
ES.24274.1	chr4	-	2284	1	Antisense	novelGene_ENSMUSG00000028890.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1294	False	NA	NA	False	NA	NA	NA	124737496	124735212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_124735200_124737500
ES.24275.1	chr4	-	1417	2	NIC	ENSMUSG00000078570.11	novel	762	3	NA	NA	24	5	intron_retention	FALSE	canonical	3	65	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTATTTGGGACT	7679	False	NA	NA	False	AATAAA	-22	NA	124744499	124742867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124744227_124744441
ES.24275.2	chr4	-	595	3	NNC	ENSMUSG00000078570.11	novel	968	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	27.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	7754	False	NA	-2	True	ATTAAA	-21	NA	124744424	124743277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124743619_124744024_124744227_124744372
ES.24275.3	chr4	-	1224	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	-3	2	-3	-2	multi-exon	FALSE	canonical	3	65	junction_2	68	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGTGACTGACCTTTC	7186	False	NA	-9	True	ATTAAA	-14	NA	124744992	124743284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124743756_124744024_124744227_124744441
ES.24275.4	chr4	-	752	3	FSM	ENSMUSG00000078570.11	ENSMUST00000125776.8	761	3	3	6	3	-2	multi-exon	FALSE	canonical	3	59	junction_2	71	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGTGACTGACCTTTC	7727	False	NA	-9	True	ATTAAA	-14	NA	124744451	124743284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124743756_124744024_124744227_124744372
ES.24275.6	chr4	-	637	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	154	177	6	-116	multi-exon	FALSE	canonical	3	24	junction_2	88.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACATCCAGTCTTGAG	7730	False	NA	NA	False	NA	NA	NA	124744448	124743454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124743756_124744024_124744227_124744314
ES.24276.1	chr4	-	3014	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-110	-177	-110	177	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGATTTTATTTTTCAA	NA	False	NA	NA	False	AATAAA	-25	NA	124756074	124748854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
ES.24276.10	chr4	-	5115	2	ISM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-73	0	-73	0	intron_retention	FALSE	canonical	3	86	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756037	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_124751033_124752923
ES.24276.11	chr4	-	3499	4	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.077702307171	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAGAAGCAATATTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	124756021	124749032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124751033_124752923_124753717_124754156_124754267_124755425
ES.24276.12	chr4	-	3952	3	NIC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-71	-2	intron_retention	FALSE	canonical	3	84	junction_2	1	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAGCAATATTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	124756035	124749033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124751033_124752923_124754267_124755425
ES.24276.13	chr4	-	1921	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	388	418	388	-418	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTTGGTAAAGTAAAACC	NA	False	NA	NA	False	AATAAA	-19	NA	124755576	124749449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
ES.24276.2	chr4	-	3163	4	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-129	177	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.0446910899164	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGATTTTATTTTTCAA	NA	False	NA	NA	False	AATAAA	-25	NA	124756093	124748854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124751033_124752923_124753001_124754156_124754397_124755425
ES.24276.3	chr4	-	2886	3	NIC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-67	169	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAGTCAAGATTTTA	NA	False	NA	NA	False	AATAAA	-42	NA	124756031	124748862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124751033_124754156_124754267_124755425
ES.24276.4	chr4	-	4148	3	NIC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-120	145	intron_retention	FALSE	canonical	3	84	junction_2	1	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAATTAGAAAGTCAC	NA	False	NA	NA	False	AATAAA	-18	NA	124756084	124748886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124751033_124752923_124754267_124755425
ES.24276.5	chr4	-	2613	3	NIC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124755927	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124751033_124754156_124754267_124755425
ES.24276.6	chr4	-	2845	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	-118	0	-118	0	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756082	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
ES.24276.7	chr4	-	3609	5	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.5058819459143	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756082	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124751033_124752923_124753287_124753445_124754267_124755425_124755765_124755997
ES.24276.8	chr4	-	2932	5	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5058819459143	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756052	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124751033_124752923_124753001_124753445_124753563_124754156_124754267_124755425
ES.24276.9	chr4	-	3247	5	NNC	ENSMUSG00000042763.10	novel	2727	4	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5058819459143	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124756081	124749031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124751033_124752923_124753287_124753445_124753563_124754156_124754267_124755425
ES.24277.1	chr4	+	210	1	Intergenic	novelGene_19936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAAGGTGTACACTTT	9222	False	NA	NA	False	AATAAA	-9	NA	124760850	124761060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124760800_124761100
ES.24278.1	chr4	+	245	1	Intergenic	novelGene_19937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAAAATGGCAGTACATA	9606	False	NA	NA	False	NA	NA	NA	124761234	124761479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124761200_124761500
ES.24279.1	chr4	+	213	1	Intergenic	novelGene_19938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCACACGAATGTTTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	124766017	124766230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124766000_124766200
ES.2428.1	chr10	-	3288	2	Antisense	novelGene_ENSMUSG00000019992.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGCAATGTTCTTCTT	NA	False	NA	NA	False	AAAACA	-32	NA	20232802	20228967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_20229223_20229769
ES.2428.2	chr10	-	3811	1	Antisense	novelGene_ENSMUSG00000019992.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-43	NA	20232802	20228991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_20229000_20232800
ES.24280.1	chr4	+	176	1	Intergenic	novelGene_19939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	124770441	124770617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124770400_124770600
ES.24281.1	chr4	+	4284	14	ISM	ENSMUSG00000028876.8	ENSMUST00000149146.2	4660	15	8253	2	-5350	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	2.01473859287828	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTGTCCTTGTT	NA	False	NA	17	True	AATAAA	-19	NA	124787844	124811591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124788041_124788496_124788848_124793608_124793743_124796345_124796518_124799716_124799826_124805799_124805859_124805975_124806102_124806912_124807099_124807445_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
ES.24281.2	chr4	+	184	1	Intergenic	novelGene_19940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCATTTACTTCATTT	NA	False	NA	NA	False	NA	NA	NA	124790824	124791008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124790800_124791000
ES.24281.3	chr4	+	178	1	Intergenic	novelGene_19941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAAGGGGAGGCCAACC	444	False	NA	NA	False	NA	NA	NA	124799299	124799477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124799300_124799500
ES.24281.4	chr4	+	3443	10	NNC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	7327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16595429884644	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTGTCCTTGTTGA	1666	False	NA	19	True	AATAAA	-21	NA	124800521	124811593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124800641_124805799_124805859_124805975_124806102_124806912_124807099_124807445_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
ES.24281.5	chr4	+	4644	7	NNC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	7337	-2	intron_retention	FALSE	canonical	0	0	junction_1	1.89296944860009	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTGTGTCCTTGTT	1676	False	NA	17	True	AATAAA	-19	NA	124800531	124811591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124800641_124805799_124805859_124805975_124807099_124807445_124807508_124807717_124808668_124809071_124809228_124809406
ES.24281.6	chr4	+	3504	10	NNC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	7572	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16595429884644	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTGTCCTTGTTGA	1911	False	NA	19	True	AATAAA	-21	NA	124800766	124811593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124800877_124805799_124805859_124805975_124806172_124806912_124807099_124807445_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
ES.24281.7	chr4	+	4448	8	NNC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	7579	0	intron_retention	FALSE	canonical	0	0	junction_1	2.24971653543195	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTGTCCTTGTTGA	1918	False	NA	19	True	AATAAA	-21	NA	124800773	124811593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124800877_124805799_124805859_124805975_124807099_124807445_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
ES.24281.8	chr4	+	3362	10	NNC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	7637	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16595429884644	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCCTCCTGTGTGTCC	1976	False	NA	12	True	AATAAA	-14	NA	124800831	124811586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124800877_124805799_124805859_124805975_124806102_124806912_124807099_124807445_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809071_124809228_124809406
ES.24281.9	chr4	+	3151	6	NIC	ENSMUSG00000028876.8	novel	4660	15	NA	NA	13542	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	2.0591260281974	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGTCCTCCTGTGTGTC	2180	False	NA	11	True	AATAAA	-13	NA	124806736	124811585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124807099_124807445_124807508_124807717_124807922_124808155_124808306_124808473_124808668_124809406
ES.24282.1	chr4	-	1641	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	-4	-11	-4	11	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTCACTCTGGTTA	NA	False	NA	1	True	AATAAA	-37	NA	124830714	124812246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.10	chr4	-	2898	11	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	614.437433755464	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830693	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124823487_124824906_124830147_124830277_124830381_124830522_124830609
ES.24282.11	chr4	-	3013	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1430	junction_4	135.357425555679	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830712	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.12	chr4	-	2319	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	1430	junction_5	130.355283744082	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830708	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.13	chr4	-	4975	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1555	junction_1	112.799080905215	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830668	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124815858_124817509_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.16	chr4	-	2164	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	21	0	intron_retention	FALSE	canonical	3	1430	junction_5	127.660132284907	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830689	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.17	chr4	-	4450	7	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	5	-2	intron_retention	FALSE	canonical	3	1430	junction_3	146.234305900573	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTCGGTCATCTGCA	NA	False	NA	-12	True	AATAAA	-24	NA	124830630	124812259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.18	chr4	-	3700	7	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	4	-2	intron_retention	FALSE	canonical	3	1430	junction_3	145.653412821899	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTCGGTCATCTGCA	NA	False	NA	-12	True	AATAAA	-24	NA	124830706	124812259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.19	chr4	-	3259	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	17	-2	intron_retention	FALSE	canonical	3	1430	junction_5	131.272617098921	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTCGGTCATCTGCA	NA	False	NA	-12	True	AATAAA	-24	NA	124830693	124812259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.2	chr4	-	2371	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	3	10	intron_retention	FALSE	canonical	3	207	junction_9	458.998211352388	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCATTCACTCTGGTT	NA	False	NA	0	True	AATAAA	-36	NA	124830707	124812247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830522_124830609
ES.24282.20	chr4	-	4278	9	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	1	junction_5	554.587684681151	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCCTCGGTCATCTGC	NA	False	NA	-13	True	AATAAA	-23	NA	124830669	124812260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124818320_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.21	chr4	-	5188	3	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	9338	-3	intron_retention	FALSE	canonical	3	1430	junction_2	62.5	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCCTCGGTCATCTGC	NA	False	NA	-13	True	AATAAA	-23	NA	124820862	124812260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124817626_124820457
ES.24282.22	chr4	-	4054	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	1	-5	intron_retention	FALSE	canonical	3	1430	junction_4	139.621938513565	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830665	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124815098_124815792_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.24	chr4	-	7474	6	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	16	-5	intron_retention	FALSE	canonical	3	1555	junction_1	124.702205273203	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830694	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815098_124815792_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.25	chr4	-	3088	7	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	5442	-5	intron_retention	FALSE	canonical	0	0	junction_6	574.742091917951	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124824758	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124823487
ES.24282.27	chr4	-	7231	6	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	15	-5	intron_retention	FALSE	canonical	3	1577	junction_1	120.802317858558	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830695	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124814179_124815004_124815098_124815792_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.28	chr4	-	4792	7	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	2	-5	intron_retention	FALSE	canonical	3	1430	junction_3	149.875133212803	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830708	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.29	chr4	-	2070	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-22	-5	intron_retention	FALSE	canonical	3	207	junction_9	460.123037758971	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830688	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830522_124830609
ES.24282.3	chr4	-	11785	5	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1555	junction_1	137.561577120939	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGGTCATCTGCATTC	NA	False	NA	-9	True	AATAAA	-27	NA	124830665	124812256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815098_124815792_124824906_124830147_124830277_124830381
ES.24282.30	chr4	-	1602	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	519.368443637957	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830697	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824900_124830147_124830277_124830381
ES.24282.32	chr4	-	4527	7	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	10	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	628.941814125564	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830700	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124814179_124815004_124817636_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.33	chr4	-	6665	7	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	1555	junction_1	119.282111912148	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830711	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.34	chr4	-	1314	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	522.560032584124	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	False	NA	-15	True	AATAAA	-21	NA	124830666	124812262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812594_124813438_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.35	chr4	-	1580	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	523.188609382557	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCAGTCCTCGGTCATC	NA	False	NA	-16	True	AATAAA	-20	NA	124830664	124812263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813499_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.36	chr4	-	4653	7	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	4	-6	intron_retention	FALSE	canonical	3	1430	junction_3	145.372414470177	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCAGTCCTCGGTCATC	NA	False	NA	-16	True	AATAAA	-20	NA	124830706	124812263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815098_124815792_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.37	chr4	-	2814	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	13	-9	intron_retention	FALSE	canonical	3	1430	junction_4	135.744958939738	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTCAGTCCTCGGTC	NA	False	NA	-19	True	AATAAA	-17	NA	124830653	124812266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.38	chr4	-	7307	6	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	4	-9	intron_retention	FALSE	canonical	3	1555	junction_1	130.664455763608	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTCAGTCCTCGGTC	NA	False	NA	-19	True	AATAAA	-17	NA	124830662	124812266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.39	chr4	-	1484	11	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	16	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	497.00866189635	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTCAGTCCTCGGT	NA	False	NA	-20	True	AATAAA	-16	NA	124830694	124812267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830413_124830528
ES.24282.4	chr4	-	3936	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1430	junction_4	139.256626999455	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGGTCATCTGCATTC	NA	False	NA	-9	True	AATAAA	-27	NA	124830672	124812256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.40	chr4	-	2205	10	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	18	-10	intron_retention	FALSE	canonical	3	207	junction_9	455.91221810485	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTCAGTCCTCGGT	NA	False	NA	-20	True	AATAAA	-16	NA	124830692	124812267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830522_124830609
ES.24282.42	chr4	-	3131	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	2	-14	intron_retention	FALSE	canonical	3	1430	junction_4	138.927965477929	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTAAGTCAGTCCT	NA	False	NA	-24	True	AATAAA	-12	NA	124830708	124812271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.43	chr4	-	1188	10	NNC	ENSMUSG00000028873.17	novel	1264	10	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	521.032545605595	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGCTTGAGTAGACT	NA	False	NA	NA	False	TTTAAA	-5	NA	124830653	124812901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124813087_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.44	chr4	-	1293	10	FSM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	-28	-1	16	1	multi-exon	FALSE	canonical	0	0	junction_1	522.560032584124	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGTGCTTGAGTAGAC	NA	False	NA	NA	False	TTTAAA	-4	NA	124830694	124812902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_124813152_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.5	chr4	-	4442	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	17	1	intron_retention	FALSE	canonical	3	1526	junction_2	112.880952224013	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGGTCATCTGCATTC	NA	False	NA	-9	True	AATAAA	-27	NA	124830693	124812256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.6	chr4	-	7990	6	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	1430	junction_3	159.472380053726	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830660	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124815858_124817509_124817626_124820457_124824906_124830147_124830277_124830381
ES.24282.7	chr4	-	3833	8	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	1430	junction_4	135.9660822051	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830706	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ES.24282.8	chr4	-	1541	11	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_10	436.918573649599	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830713	124812257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830522_124830609
ES.24283.1	chr4	+	2845	6	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-4	5	intron_retention	FALSE	non_canonical	2	3	junction_1	16.1616830806695	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGGTAAATATATTACT	NA	False	NA	10	True	AATAAA	-24	NA	124830846	124838454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124830881_124830971_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
ES.24283.10	chr4	+	2889	5	FSM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	20	2	20	-1	multi-exon	FALSE	non_canonical	3	27	junction_4	9.02773504263389	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGACATTTGGTAAATA	NA	False	NA	3	True	AATAAA	-17	NA	124830886	124838447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
ES.24283.11	chr4	+	4861	1	NIC	ENSMUSG00000044730.18	novel	4749	4	NA	NA	1017	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGACATTTGGTAAATAT	NA	False	NA	4	True	AATAAA	-18	NA	124833587	124838448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124833600_124838400
ES.24283.2	chr4	+	2767	5	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-1	-180	intron_retention	FALSE	non_canonical	2	3	junction_1	17.9304210770411	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAATTTAAATACA	NA	False	NA	NA	False	AAAAAG	-42	NA	124830849	124838268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124830881_124830971_124831127_124832232_124832511_124834158_124834339_124836145
ES.24283.3	chr4	+	817	3	FSM	ENSMUSG00000044730.18	ENSMUST00000233530.2	1203	3	-1	387	-1	-387	multi-exon	FALSE	canonical	3	26	junction_1	13	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	124830849	124832860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124830884_124830971_124831127_124832232
ES.24283.4	chr4	+	4761	4	FSM	ENSMUSG00000044730.18	ENSMUST00000233434.2	4749	4	-8	-4	-1	3	multi-exon	FALSE	canonical	3	26	junction_1	10.7806410858642	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTGGTAAATATATTA	NA	False	NA	8	True	AATAAA	-22	NA	124830849	124838452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158
ES.24283.7	chr4	+	2948	5	NNC	ENSMUSG00000044730.18	novel	4749	4	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_4	18.7932833746528	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTGGTAAATATATT	NA	False	NA	7	True	AATAAA	-21	NA	124830850	124838451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124830884_124830971_124831127_124832232_124832511_124834158_124834338_124836148
ES.24283.8	chr4	+	2550	5	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	13.9530462623758	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGACATTTGGTAAATAT	NA	False	NA	4	True	AATAAA	-18	NA	124830860	124838448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124830884_124830971_124831127_124834158_124834339_124836145_124836265_124836375
ES.24283.9	chr4	+	3076	5	NIC	ENSMUSG00000044730.18	novel	2911	5	NA	NA	-3	2	intron_retention	FALSE	non_canonical	0	0	junction_3	19.1049731745428	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTGGTAAATATATT	NA	False	NA	7	True	AATAAA	-21	NA	124830863	124838451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124830884_124830971_124831127_124832232_124832648_124834158_124834339_124836145
ES.24284.1	chr4	-	3799	3	Antisense	novelGene_ENSMUSG00000044730.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAAACAGAGTATCTGT	NA	False	NA	NA	False	NA	NA	NA	124840264	124833263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_124834344_124836149_124838074_124839469
ES.24285.1	chr4	+	2961	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	7	-1	intron_retention	FALSE	canonical	3	650	junction_4	52.8467653905601	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTTCGCTTTCT	NA	False	NA	27	True	ATTAAA	-21	NA	124923791	124949172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.10	chr4	+	3145	15	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-1	intron_retention	FALSE	canonical	0	0	junction_2	263.091364979033	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTTCGCTTTCT	NA	False	NA	27	True	ATTAAA	-21	NA	124923810	124949172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929013_124929103_124931314_124931455_124934729_124934915_124936406_124936683_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.11	chr4	+	3651	13	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	2	intron_retention	FALSE	canonical	0	0	junction_10	281.410176610584	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAACTGTGTTCGCTTTC	NA	False	NA	26	True	ATTAAA	-20	NA	124923810	124949171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124934729_124934915_124936406_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946230_124947328_124947934_124948021_124948976
ES.24285.12	chr4	+	4097	14	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-11	intron_retention	FALSE	canonical	3	12	junction_3	200.188225037805	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923810	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.13	chr4	+	3535	14	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-11	intron_retention	FALSE	canonical	3	650	junction_4	48.0141744357389	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923810	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124948021_124948976
ES.24285.14	chr4	+	2397	16	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-30	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	187.73309659076	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923820	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947856_124948021_124948976
ES.24285.15	chr4	+	2179	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-30	-11	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	194.018106140133	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923820	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.17	chr4	+	2971	17	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-30	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	292.48376023294	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCATTAGGAACTGTGT	NA	False	NA	18	True	ATTAAA	-12	NA	124923820	124949163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124935860_124936474_124936581_124936683_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.18	chr4	+	5333	15	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-30	1	intron_retention	TRUE	non_canonical	0	0	junction_2	196.371680073003	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAACTGTGTTCGCTTT	NA	False	NA	25	True	ATTAAA	-19	NA	124923820	124949170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124929897_124929998_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.19	chr4	+	3087	14	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-29	2	intron_retention	FALSE	canonical	3	12	junction_2	200.476798521829	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTTCGCTTTCTTGT	NA	False	NA	30	True	ATTAAA	-24	NA	124923821	124949175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124929103_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.2	chr4	+	2363	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	10	-7	10	3	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTCGCTTTCTTGTG	NA	False	NA	31	True	ATTAAA	-25	NA	124923794	124949176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.20	chr4	+	4833	14	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	650	junction_4	54.1543924797617	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGGAACTGTGTTCGC	NA	False	NA	22	True	ATTAAA	-16	NA	124923822	124949167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.21	chr4	+	5713	13	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-28	-6	intron_retention	FALSE	canonical	3	650	junction_4	51.9716803226099	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCATTAGGAACTGTGT	NA	False	NA	18	True	ATTAAA	-12	NA	124923822	124949163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.22	chr4	+	3116	17	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-28	0	intron_retention	FALSE	canonical	1	3	junction_9	285.61358702581	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923822	124949173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124938292_124938394_124939039_124939124_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.23	chr4	+	4753	15	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-25	-11	intron_retention	FALSE	canonical	0	0	junction_7	264.195129263449	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923825	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124937517_124938016_124938131_124939039_124939103_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.26	chr4	+	4421	16	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	-12	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	255.923651809589	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTCGCTTTCTTGTG	NA	False	NA	31	True	ATTAAA	-25	NA	124923838	124949176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929915_124929999_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946221_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.3	chr4	+	2914	15	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	24	3	intron_retention	FALSE	canonical	0	0	junction_12	196.875750727432	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTCGCTTTCTTGTG	NA	False	NA	31	True	ATTAAA	-25	NA	124923808	124949176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946230_124947328_124947934_124948021_124948976
ES.24285.4	chr4	+	9331	12	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	25	-11	intron_retention	FALSE	canonical	3	650	junction_4	53.4726314487102	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	False	NA	13	True	ATTAAA	-7	NA	124923809	124949158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124947328_124947934_124948021_124948976
ES.24285.5	chr4	+	4255	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	25	2	intron_retention	FALSE	canonical	3	650	junction_4	52.6940050030865	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTTCGCTTTCTTGT	NA	False	NA	30	True	ATTAAA	-24	NA	124923809	124949175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.6	chr4	+	3034	16	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-6	intron_retention	FALSE	canonical	2	12	junction_8	245.815233231972	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCATTAGGAACTGTGT	NA	False	NA	18	True	ATTAAA	-12	NA	124923810	124949163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124938292_124938394_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
ES.24285.7	chr4	+	3443	17	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	245.484597276489	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTTCGCTTTCT	NA	False	NA	27	True	ATTAAA	-21	NA	124923810	124949172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124938292_124938394_124939039_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24285.8	chr4	+	4833	14	NNC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	26	-1	intron_retention	FALSE	canonical	2	12	junction_3	268.941668957741	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTGTGTTCGCTTTCT	NA	False	NA	27	True	ATTAAA	-21	NA	124923810	124949172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124923988_124928030_124928116_124929007_124929103_124934729_124934915_124936406_124937517_124938016_124938131_124938292_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ES.24286.1	chr4	+	2391	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	1	-47	1	47	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCTTCTAAAGGAATC	NA	False	NA	61	True	CATAAA	-18	NA	124960465	124967882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ES.24286.2	chr4	+	3275	3	ISM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	15	30	15	-30	intron_retention	FALSE	canonical	3	77	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATTTGTAAA	NA	False	NA	-16	True	NA	NA	NA	124960479	124967805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124960746_124961882_124961986_124964899
ES.24286.3	chr4	+	2316	4	NNC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.3016404408334	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTCATTTTAGAGGGTA	NA	False	NA	6	True	AATAAA	-12	NA	124960490	124967827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124960746_124961882_124962002_124964910_124965484_124966458
ES.24286.4	chr4	+	2427	4	NIC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	-2	27	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	40.7785346584314	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTTGTTCATAGGTG	NA	False	NA	41	True	AATATA	-34	NA	124960492	124967862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124960746_124961799_124961986_124964899_124965484_124966458
ES.24286.5	chr4	+	2375	5	NNC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	31	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5815394273152	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGCCTCATTTTAGA	NA	False	NA	1	True	AATAAA	-7	NA	124960525	124967822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124960746_124961882_124961986_124962202_124962307_124964899_124965484_124966458
ES.24287.1	chr4	-	7039	1	Antisense	novelGene_ENSMUSG00000028869.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACACAAAAAGATGCAGTA	NA	False	NA	NA	False	NA	NA	NA	124940667	124933628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_124933600_124940700
ES.24288.1	chr4	-	2299	5	Fusion	ENSMUSG00000086342.2_ENSMUSG00000042707.7	novel	2133	6	NA	NA	-86	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTGCTTCTGTCTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	124978826	124949131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_124950418_124952780_124952946_124953249_124953429_124957345_124957516_124978327
ES.24288.2	chr4	-	139	1	Intergenic	novelGene_19942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124956603	124956464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124956500_124956600
ES.24288.3	chr4	-	3782	1	Antisense	novelGene_ENSMUSG00000050213.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124966317	124962535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_124962500_124966300
ES.24288.4	chr4	-	5358	2	NNC	ENSMUSG00000086342.2	novel	620	2	NA	NA	-84	4943	intron_retention	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGACTTTGGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	124978824	124971706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124974424_124976183
ES.24288.5	chr4	-	3660	2	NNC	ENSMUSG00000086342.2	novel	620	2	NA	NA	-107	4465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	124978847	124972184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_124975325_124978327
ES.24288.6	chr4	-	1142	1	Genic_Genomic	ENSMUSG00000086342.2	novel	NA	NA	NA	NA	-96	-1045	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATGTCTATGAGTGT	NA	False	NA	NA	False	NA	NA	NA	124978836	124977694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_124977700_124978800
ES.24289.1	chr4	+	1233	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	-32	3349	-32	0	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978894	125003682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.10	chr4	+	4585	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-3	-3528	-3	4	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGATACTGAAATTGTG	NA	False	NA	NA	False	AAGAAA	-1	NA	124978953	125007035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
ES.24289.12	chr4	+	4208	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	11	-3347	-2	-2	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGCTGATACTGAA	NA	False	NA	NA	False	NA	NA	NA	124978954	125007029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ES.24289.13	chr4	+	1126	6	NIC	ENSMUSG00000028863.14	novel	4550	7	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	123.477285360507	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGGCAGCTGCCTCTT	NA	False	NA	39	True	ACTAAA	-15	NA	124978954	125003681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124996631_124996825_125002115_125002150_125003091
ES.24289.14	chr4	+	4345	6	NNC	ENSMUSG00000028863.14	novel	872	6	NA	NA	-2	4	intron_retention	TRUE	non_canonical	0	0	junction_5	132.062712375598	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGATACTGAAATTGTG	NA	False	NA	NA	False	AAGAAA	-1	NA	124978954	125007035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_125000100_125006513
ES.24289.16	chr4	+	2148	8	NNC	ENSMUSG00000028863.14	novel	1054	8	NA	NA	0	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	125.804513075661	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCATTCTGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	124978956	125004597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996829_125001444_125001503_125002115_125002150_125003091
ES.24289.17	chr4	+	1129	6	NIC	ENSMUSG00000028863.14	novel	1054	8	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	132.062712375598	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978964	125003682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003091
ES.24289.18	chr4	+	1316	7	NNC	ENSMUSG00000028863.14	novel	681	8	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	116.7895781119	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124979233	125003682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124979482_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.19	chr4	+	1506	7	NNC	ENSMUSG00000028863.14	novel	681	8	NA	NA	180	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	117.112481543742	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGGCAGCTGCCTCTT	NA	False	NA	39	True	ACTAAA	-15	NA	124979233	125003681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124979673_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.2	chr4	+	1089	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	-38	-179	-21	179	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTCATGTGCTCCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	124978905	125003861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ES.24289.20	chr4	+	772	4	ISM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	4900	3509	136	15	3prime_fragment	FALSE	canonical	3	173	junction_2	72.4292758489273	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTGTTGTAT	NA	False	NA	5	True	NA	NA	NA	124983826	125003522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.21	chr4	+	2251	1	Intergenic	novelGene_19945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCATCCCAGCCCAG	4334	False	NA	NA	False	NA	NA	NA	124990807	124993058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_124990800_124993100
ES.24289.22	chr4	+	4813	1	NIC	ENSMUSG00000028863.14	novel	4550	7	NA	NA	448	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGCTGATACTGAA	NA	False	NA	NA	False	NA	NA	NA	125002216	125007029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125002200_125007000
ES.24289.3	chr4	+	4569	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	-15	-4	-15	4	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGATACTGAAATTGTG	NA	False	NA	NA	False	AAGAAA	-1	NA	124978911	125007035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.4	chr4	+	1032	6	NIC	ENSMUSG00000028863.14	novel	872	6	NA	NA	-3	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	14	True	ATTAAA	-20	NA	124978923	124997675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
ES.24289.5	chr4	+	882	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	-10	0	7	0	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978933	125003682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ES.24289.6	chr4	+	1249	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	-12	-183	1	8	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCTCTTTGGCTTCTT	NA	False	NA	48	True	ACTAAA	-24	NA	124978944	125003690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
ES.24289.7	chr4	+	5413	6	NIC	ENSMUSG00000028863.14	novel	4550	7	NA	NA	2	4	intron_retention	FALSE	canonical	3	173	junction_4	63.9643650793158	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGATACTGAAATTGTG	NA	False	NA	NA	False	AAGAAA	-1	NA	124978945	125007035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.8	chr4	+	4544	7	NNC	ENSMUSG00000028863.14	novel	4550	7	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	119.471986488698	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCTGATACTGAAATT	NA	False	NA	NA	False	NA	NA	NA	124978948	125007032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_124979060_124979937_124980054_124983652_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.24289.9	chr4	+	1359	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	25	3166	-5	183	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGCTCCTTCTAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	124978951	125003865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ES.2429.1	chr10	+	212	1	Intergenic	novelGene_1852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGAATGTTTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	20247052	20247264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20247100_20247300
ES.24290.1	chr4	-	175	1	Intergenic	novelGene_19943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATGAACTT	NA	False	NA	NA	False	NA	NA	NA	124982414	124982239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124982200_124982400
ES.24291.1	chr4	-	174	1	Intergenic	novelGene_19944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACGAG	NA	False	NA	NA	False	NA	NA	NA	124989282	124989108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124989100_124989300
ES.24292.1	chr4	-	1856	1	Intergenic	novelGene_19946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACAAAAACAAAAAC	NA	False	NA	NA	False	AAAACA	-11	NA	124999627	124997771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_124997800_124999600
ES.24293.1	chr4	-	2836	6	FSM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	-81	0	-81	0	multi-exon	FALSE	canonical	2	13	junction_5	0.748331477354788	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGCCAGTCGTTTTGA	NA	False	NA	NA	False	AAGAAA	-7	NA	125021714	125012215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_125013938_125014118_125014226_125014664_125014900_125016046_125016187_125020398_125020876_125021559
ES.24293.2	chr4	-	3068	6	NNC	ENSMUSG00000042677.8	novel	2755	6	NA	NA	3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.63560112144215	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGCTATT	NA	False	NA	NA	False	NA	NA	NA	125021630	125012229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_125013938_125014118_125014226_125014664_125014900_125015716_125016187_125020398_125020876_125021559
ES.24293.3	chr4	-	3084	7	NNC	ENSMUSG00000042677.8	novel	2755	6	NA	NA	-43	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.6248689714506	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAGAAATTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	125021676	125012243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_125013938_125014118_125014226_125014664_125015027_125015716_125015904_125016046_125016187_125020398_125020876_125021559
ES.24293.4	chr4	-	811	2	ISM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	-70	7993	-70	-6322	5prime_fragment	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTTGCCAAGAGTCAC	NA	False	NA	NA	False	AAAACA	-5	NA	125021703	125020208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_125020876_125021559
ES.24294.1	chr4	-	164	1	Intergenic	novelGene_19947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	125031332	125031168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125031200_125031300
ES.24295.1	chr4	-	179	1	Intergenic	novelGene_19948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	125048485	125048306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125048300_125048500
ES.24296.1	chr4	+	2801	1	Intergenic	novelGene_19949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAAGTTTATGGCCT	3992	False	NA	NA	False	NA	NA	NA	125056755	125059556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125056800_125059600
ES.24297.1	chr4	+	5840	2	Intergenic	novelGene_19950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTCTTTGCAACAGGCT	7772	False	NA	NA	False	NA	NA	NA	125060535	125100085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125060672_125094381
ES.24298.1	chr4	-	373	1	Intergenic	novelGene_19951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATCCCATTACACTAA	NA	False	NA	NA	False	NA	NA	NA	125165828	125165455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125165500_125165800
ES.24298.2	chr4	-	189	1	Intergenic	novelGene_19952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCAGTGCTTGAG	NA	False	NA	NA	False	NA	NA	NA	125165828	125165639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125165600_125165800
ES.24299.1	chr4	+	160	1	Intergenic	novelGene_19953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	125173612	125173772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125173600_125173800
ES.243.1	chr1	-	3057	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAAGATCCGTGGAGCA	NA	False	NA	NA	False	NA	NA	NA	34616843	34613786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34613800_34616800
ES.2430.1	chr10	-	177	1	Intergenic	novelGene_1853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	20382251	20382074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20382100_20382300
ES.24300.1	chr4	-	3226	4	Intergenic	novelGene_19954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGTGCTCAAGGTTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	125310026	125298357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125299110_125299179_125301517_125301878_125301989_125309999
ES.24301.1	chr4	+	5307	4	Intergenic	novelGene_19955	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAAATGTAATCGATGGGA	NA	False	NA	NA	False	AATAAA	-29	NA	125345050	125363398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125345179_125355986_125356058_125357057_125361338_125362570
ES.24302.1	chr4	+	2205	9	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-410	-53526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.95736428867331	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGATGCCTGGACTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	125384082	125554440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125553844
ES.24302.10	chr4	+	7338	16	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-36	-1659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.29261422414639	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCACAGTGTATATATGAC	NA	False	NA	NA	False	NA	NA	NA	125384456	125606307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598337_125598747_125598999_125601689
ES.24302.11	chr4	+	4219	15	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	-4	7449	-4	-7449	5prime_fragment	FALSE	canonical	2	6	junction_13	6.1145527311522	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGATTTTAAACTCATA	NA	False	NA	NA	False	NA	NA	NA	125384488	125600517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747
ES.24302.12	chr4	+	904	1	Intergenic	novelGene_19956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTATGTCTCAGCTT	NA	False	NA	NA	False	NA	NA	NA	125396548	125397452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125396500_125397500
ES.24302.13	chr4	+	951	1	FSM	ENSMUSG00000082062.2	ENSMUST00000118517.2	552	1	-209	-190	-209	190	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAGGAAAAAAAAACCA	NA	False	NA	NA	False	AATAAA	-44	NA	125397871	125398822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125397900_125398800
ES.24302.14	chr4	+	321	2	Genic_Genomic	ENSMUSG00000119232.1	novel	109	1	NA	NA	-667	172	multi-exon	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAGGAAAAAAAAACCA	NA	False	NA	NA	False	AATAAA	-44	NA	125397874	125398822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_125398016_125398642
ES.24302.15	chr4	+	542	2	Genic_Genomic	ENSMUSG00000082062.2	novel	552	1	NA	NA	-205	190	multi-exon	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAGGAAAAAAAAACCA	NA	False	NA	NA	False	AATAAA	-44	NA	125397875	125398822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_125398177_125398581
ES.24302.16	chr4	+	1311	5	Intergenic	novelGene_19957	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTTGTAGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	125428931	125451036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125429472_125449547_125449770_125449983_125450025_125450429_125450660_125450758
ES.24302.17	chr4	+	178	1	Intergenic	novelGene_19958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4417	False	NA	NA	False	NA	NA	NA	125449773	125449951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125449800_125450000
ES.24302.18	chr4	+	2347	2	Intergenic	novelGene_19959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGTTGTTTTGTTTT	7963	False	NA	NA	False	NA	NA	NA	125498659	125501258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125499737_125499988
ES.24302.19	chr4	+	4281	15	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	118332	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.28817697392016	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCCCTTCCCAAGGTGT	NA	False	NA	7	True	AATAAA	-14	NA	125502824	125607962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125502881_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598272_125605859
ES.24302.2	chr4	+	4771	15	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-305	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	7.41379023943123	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCAAGGTGTGTTT	NA	False	NA	11	True	AATAAA	-18	NA	125384187	125607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598268_125605864
ES.24302.20	chr4	+	1975	10	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	118891	-53526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.17861174580595	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGATGCCTGGACTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	125503383	125554440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125503549_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125553841
ES.24302.21	chr4	+	7597	18	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	118897	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.33884477490322	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	125503389	125607964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125503549_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125603841_125604036_125604770_125605860
ES.24302.22	chr4	+	5061	17	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	118899	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.84991042942529	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCAAGGTGTGTTT	NA	False	NA	11	True	AATAAA	-18	NA	125503391	125607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125503549_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125602039_125605861
ES.24302.23	chr4	+	3209	3	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	118930	-82395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCTTTTAGGATGTT	NA	False	NA	NA	False	NA	NA	NA	125503422	125525571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125503549_125517273_125517451_125522665
ES.24302.24	chr4	+	3602	14	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	141579	4937	141579	-4937	3prime_fragment	FALSE	canonical	2	6	junction_11	6.21888705581777	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGACCTCCAGAGGCC	NA	False	NA	NA	False	AAGAAA	-20	NA	125526071	125603029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689
ES.24302.25	chr4	+	6750	13	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	158995	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	7.1816703411455	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGTCCCTTCCCAAG	NA	False	NA	3	True	AATAAA	-10	NA	125543487	125607958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125603805_125604001_125604770_125605854
ES.24302.26	chr4	+	4322	3	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	217844	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	125602336	125607964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125603805_125604021_125604770_125605858
ES.24302.27	chr4	+	3921	3	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	218273	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCAAGGTGTGTTT	NA	False	NA	11	True	AATAAA	-18	NA	125602765	125607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125603811_125603993_125604770_125605866
ES.24302.28	chr4	+	3135	2	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	218740	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCAAGGTGTGTTT	NA	False	NA	11	True	AATAAA	-18	NA	125603232	125607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125604282_125605880
ES.24302.29	chr4	+	3493	2	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	218888	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	125603380	125607964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125604770_125605860
ES.24302.3	chr4	+	7892	18	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-287	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	7.72225472210543	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	125384205	125607964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125603994_125604291_125604771_125605838
ES.24302.30	chr4	+	2848	1	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	220521	105	220521	-105	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTATTTTCCTTTTTA	NA	False	NA	-94	True	AATAAA	-13	NA	125605013	125607861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125605000_125607900
ES.24302.4	chr4	+	3529	15	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	-280	8415	-280	-8415	5prime_fragment	FALSE	canonical	2	6	junction_13	6.1145527311522	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCTGCTTTTTGCATA	NA	False	NA	NA	False	NA	NA	NA	125384212	125599551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747
ES.24302.5	chr4	+	2330	10	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-278	-53530	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.70441592149321	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCCGGATGCCTGGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	125384214	125554436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125553841
ES.24302.6	chr4	+	9245	16	FSM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	-272	0	-272	0	multi-exon	FALSE	canonical	2	6	junction_13	6.12100209660695	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCAAGGTGTGTTT	NA	False	NA	11	True	AATAAA	-18	NA	125384220	125607966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689
ES.24302.7	chr4	+	8012	17	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-262	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	7.07990112925315	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAAGGTGTGTTTTC	NA	False	NA	13	True	AATAAA	-20	NA	125384230	125607968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125602575_125603799
ES.24302.8	chr4	+	4956	17	NNC	ENSMUSG00000001985.10	novel	8973	16	NA	NA	-225	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	6.95043838545455	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTCCCAAGGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	125384267	125607964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481_125553596_125564345_125564550_125579786_125580011_125584887_125585007_125587754_125587973_125598125_125598349_125598747_125598999_125601689_125602938_125607177
ES.24302.9	chr4	+	2487	9	ISM	ENSMUSG00000001985.10	ENSMUST00000030676.8	8973	16	-187	53528	-187	-53528	5prime_fragment	FALSE	canonical	2	9	junction_1	5.3619026473818	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCGGATGCCTGGACTT	NA	False	NA	NA	False	ATTAAA	-13	NA	125384305	125554438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125384739_125517273_125517451_125526060_125526319_125533073_125533256_125535336_125535391_125543471_125543646_125544240_125544385_125550080_125550189_125553481
ES.24303.1	chr4	-	2939	1	Antisense	novelGene_ENSMUSG00000001985.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCTGAAGAGCAAATCT	NA	False	NA	NA	False	NA	NA	NA	125385957	125383018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_125383000_125386000
ES.24304.1	chr4	-	671	1	Intergenic	novelGene_19960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	125503632	125502961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125503000_125503600
ES.24305.1	chr4	-	3571	2	Antisense	novelGene_ENSMUSG00000001985.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCTTTGAACGCAACTA	NA	False	NA	NA	False	TATAAA	-10	NA	125599184	125594120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_125594289_125595781
ES.24306.1	chr4	-	243	1	Intergenic	novelGene_19961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGATTCCATGCTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	125617611	125617368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125617400_125617600
ES.24307.1	chr4	-	1455	5	NIC	ENSMUSG00000085562.8	novel	3623	7	NA	NA	-42	339	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	1.4790199457749	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTTGAATGCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	125816145	125783868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_125784527_125785276_125785384_125786974_125787070_125812280_125812600_125815869
ES.24307.2	chr4	-	2877	5	NNC	ENSMUSG00000085562.8	novel	3623	7	NA	NA	-37	250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.87082869338697	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTATGAGATGTTTGA	NA	False	NA	NA	False	NA	NA	NA	125816140	125783957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_125784527_125785276_125785592_125785666_125787070_125812280_125812600_125815869
ES.24307.3	chr4	-	1257	6	NNC	ENSMUSG00000085562.8	novel	3623	7	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.83303027798234	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGTTCCTTTCAGGC	NA	False	NA	NA	False	ATTAAA	-18	NA	125816137	125784206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_125784527_125785276_125785404_125786974_125787070_125787635_125787764_125812280_125812600_125815869
ES.24308.1	chr4	+	2610	2	Intergenic	novelGene_19962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGTGTTGCAATATAAT	NA	False	NA	NA	False	NA	NA	NA	125902834	125906424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125904372_125905351
ES.24308.2	chr4	+	181	1	Intergenic	novelGene_19963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAGAAAATGTAG	NA	False	NA	NA	False	NA	NA	NA	125905295	125905476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125905300_125905500
ES.24309.1	chr4	+	177	1	Intergenic	novelGene_19964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	125906615	125906792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_125906600_125906800
ES.2431.1	chr10	+	1839	1	Antisense	novelGene_ENSMUSG00000092051.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTAAGTTAGTTTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	20394232	20396071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_20394200_20396100
ES.24310.1	chr4	+	3421	16	NNC	ENSMUSG00000028859.15	novel	3160	15	NA	NA	-1153	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.29983164553722	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGTACTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	125917189	125938227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125917419_125921109_125921194_125923555_125923856_125925590_125925781_125925888_125926093_125927962_125928133_125928234_125928369_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
ES.24310.2	chr4	+	3021	14	NNC	ENSMUSG00000028859.15	novel	3160	15	NA	NA	-1137	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.09226942188335	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTACTTGTTTTGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	125917205	125938229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125917419_125921109_125921194_125923555_125923856_125925590_125925715_125925904_125926093_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
ES.24310.3	chr4	+	3328	16	NNC	ENSMUSG00000028859.15	novel	3160	15	NA	NA	-1122	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2.99332590941915	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGTACTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	125917220	125938227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125917419_125921109_125921194_125923555_125923856_125925590_125925715_125925904_125926093_125927962_125928133_125928214_125928369_125929091_125929172_125929558_125929773_125931312_125931502_125931820_125931923_125933298_125933446_125933554_125933690_125936452_125936544_125936696_125936779_125937157
ES.24311.1	chr4	-	229	1	Intergenic	novelGene_19965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	125940313	125940084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125940100_125940300
ES.24312.1	chr4	+	956	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	-7	-12	-7	12	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGCCTTCTTTTTAA	NA	False	NA	39	True	AATAAA	-24	NA	125940710	125949337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ES.24312.10	chr4	+	441	4	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	658.634952003005	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAAGAATGATGGAAGAT	NA	False	NA	25	True	AATAAA	-10	NA	125940781	125949323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125940993_125941226_125941272_125942427_125942462_125949172
ES.24312.11	chr4	+	995	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	88	-146	36	146	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGGTGGCCGTAGCTG	NA	False	NA	NA	False	AATACA	-18	NA	125940805	125949471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ES.24312.12	chr4	+	1066	7	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	55	2	intron_retention	FALSE	canonical	3	1282	junction_6	41.2542927059314	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125940824	125949327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ES.24312.13	chr4	+	2588	3	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	4084	2	intron_retention	FALSE	canonical	3	1282	junction_2	29	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125945110	125949327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125947352_125948753_125948946_125949172
ES.24312.2	chr4	+	728	8	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	469.234591692488	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125940767	125949327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125940832_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ES.24312.3	chr4	+	2409	2	ISM	ENSMUSG00000028861.14	ENSMUST00000124614.2	328	3	-257	-58	0	58	intron_retention	FALSE	canonical	3	1350	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCACCCTAAGTCTTCT	NA	False	NA	30	True	NA	NA	NA	125940769	125944334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125941272_125942427
ES.24312.4	chr4	+	962	8	NNC	ENSMUSG00000028861.14	novel	937	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	470.280897388975	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125940770	125949327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125941069_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ES.24312.5	chr4	+	825	7	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_5	502.611071196098	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	False	NA	27	True	AATAAA	-12	NA	125940770	125949325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125948753_125948946_125949172
ES.24312.6	chr4	+	3223	6	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	1	15	intron_retention	FALSE	canonical	3	1282	junction_5	27.9427987145168	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTTCTTTTTAACCT	NA	False	NA	42	True	AATAAA	-27	NA	125940770	125949340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125941272_125942427_125942507_125944272_125944322_125945117_125947352_125948753_125948946_125949172
ES.24312.7	chr4	+	2976	7	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	1282	junction_6	49.8745648825353	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATGGAAGATGGCC	NA	False	NA	29	True	AATAAA	-14	NA	125940770	125949327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125947352_125948753_125948946_125949172
ES.24312.8	chr4	+	4377	6	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	4	4	intron_retention	FALSE	canonical	3	1282	junction_5	54.5967031971712	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGGAAGATGGCCTT	NA	False	NA	31	True	AATAAA	-16	NA	125940773	125949329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125948946_125949172
ES.24312.9	chr4	+	4734	6	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	8	1	intron_retention	FALSE	canonical	3	1282	junction_5	50.5790470451945	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGATGGAAGATGGC	NA	False	NA	28	True	AATAAA	-13	NA	125940777	125949326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125940993_125941226_125941272_125942427_125944322_125945117_125947352_125948753_125948946_125949172
ES.24313.1	chr4	-	163	1	Intergenic	novelGene_19966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAAATCCAAAACC	NA	False	NA	NA	False	NA	NA	NA	125951022	125950859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125950900_125951000
ES.24314.1	chr4	+	1464	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	18	3531	18	0	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTCCCCATTATTCTC	2381	False	NA	7	True	AATATA	-17	NA	125952375	125982457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ES.24314.2	chr4	+	2463	9	NIC	ENSMUSG00000042616.9	novel	5013	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	16	junction_2	3.96862696659689	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGACCTTCCCCATTA	2400	False	NA	2	True	AATATA	-12	NA	125952394	125982452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125981563_125982114
ES.24314.3	chr4	+	546	3	ISM	ENSMUSG00000042616.9	ENSMUST00000143712.3	1473	11	27935	5	-1140	0	3prime_fragment	FALSE	canonical	3	15	junction_1	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGACCTTCCCCATTA	NA	False	NA	2	True	AATATA	-12	NA	125980331	125982452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125980476_125981498_125981563_125982114
ES.24315.1	chr4	-	179	1	Intergenic	novelGene_19967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	125974066	125973887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125973900_125974100
ES.24316.1	chr4	-	179	1	Intergenic	novelGene_19968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACG	NA	False	NA	NA	False	NA	NA	NA	125990022	125989843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_125989800_125990000
ES.24317.1	chr4	+	775	2	NNC	ENSMUSG00000050188.9	novel	943	2	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGTCTGTGCCTGATG	NA	False	NA	25	True	CATAAA	-16	NA	125990407	125992372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125990432_125991621
ES.24317.10	chr4	+	9354	11	NNC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	-5315	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.306232507645	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125992434	126034820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125998474_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.11	chr4	+	3304	12	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	104.66830726373	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGTAGCCTGCCT	NA	False	NA	19	True	AATAAA	-20	NA	125997743	126034819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602_126033738_126033943
ES.24317.12	chr4	+	3492	13	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	151.952295145549	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGTAGCCTGCCT	NA	False	NA	19	True	AATAAA	-20	NA	125997745	126034819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126012066_126012256_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602_126033733_126033937
ES.24317.13	chr4	+	3367	13	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	152.232734835697	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125997745	126034820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126012066_126012134_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602_126033732_126033940
ES.24317.15	chr4	+	3511	11	FSM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	-17	-2	-2	2	multi-exon	FALSE	canonical	3	325	junction_5	16.9944108459223	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGCCTGCCTCTGTG	NA	False	NA	24	True	AATAAA	-25	NA	125997747	126034824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.17	chr4	+	3567	12	NIC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	134.390389758733	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125997754	126034820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125997940_126012066_126012134_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.18	chr4	+	3290	12	NNC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	104.66830726373	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997757	126034822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602_126033732_126033940
ES.24317.19	chr4	+	3686	12	NIC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	134.010422685811	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997759	126034822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125997940_126012066_126012256_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.2	chr4	+	1948	1	NIC	ENSMUSG00000050188.9	novel	943	2	NA	NA	9	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGTCTGTGCCTGATG	NA	False	NA	25	True	CATAAA	-16	NA	125990424	125992372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125990400_125992400
ES.24317.22	chr4	+	3476	13	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.370524875216	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCACCATGGTCTGTAG	NA	False	NA	12	True	AATAAA	-13	NA	125997761	126034812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_125998277_125998474_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602_126033733_126033937
ES.24317.23	chr4	+	3681	12	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.605570350659	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCACCATGGTCTGTAG	NA	False	NA	12	True	AATAAA	-13	NA	125997761	126034812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_125998277_125998474_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.24	chr4	+	3688	12	NNC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.605570350659	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCATGGTCTGTAGCC	NA	False	NA	14	True	AATAAA	-15	NA	125997763	126034814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126007467_126007671_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.25	chr4	+	4447	10	ISM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	0	9	0	-8	intron_retention	FALSE	canonical	3	325	junction_5	17.9078574381385	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCACCATGGTCTGTAGC	NA	False	NA	13	True	AATAAA	-14	NA	125997764	126034813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553
ES.24317.26	chr4	+	3495	11	NNC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.466077646424	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCACCATGGTCTGTAGC	NA	False	NA	13	True	AATAAA	-14	NA	125997764	126034813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126017508_126017629_126018875_126018962_126019455_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.27	chr4	+	3618	12	NNC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.605570350659	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997764	126034822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_125998277_125998404_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.28	chr4	+	1407	4	NNC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.38268528188	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125997764	126034820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125997940_126017508_126017629_126018875_126018944_126033776
ES.24317.3	chr4	+	3858	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	33	-2948	3	2948	multi-exon	FALSE	canonical	3	289	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTTGTGTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	125990448	125995325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125990603_125991621
ES.24317.30	chr4	+	3997	10	NIC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	325	junction_4	16.7199149386459	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997765	126034822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125997940_126017508_126017629_126018875_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.32	chr4	+	3248	10	NIC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	112.040116272347	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATGGTCTGTAGCCT	NA	False	NA	15	True	AATAAA	-16	NA	125997773	126034815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.34	chr4	+	3315	10	ISM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	19743	3	-5104	-2	3prime_fragment	FALSE	canonical	3	325	junction_4	16.2754074876449	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGTAGCCTGCCT	NA	False	NA	19	True	AATAAA	-20	NA	126017507	126034819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.4	chr4	+	3754	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	5	-2951	-2	2948	multi-exon	FALSE	canonical	3	54	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTTGTGTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	125990450	125995325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125990501_125991621
ES.24317.5	chr4	+	788	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	18	2	11	-2	multi-exon	FALSE	canonical	3	54	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGTCTGTGCCTGATG	NA	False	NA	25	True	CATAAA	-16	NA	125990463	125992372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125990501_125991621
ES.24317.6	chr4	+	865	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	75	3	38	0	multi-exon	FALSE	canonical	3	289	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTCTGTGCCTGATGCC	NA	False	NA	27	True	CATAAA	-18	NA	125990490	125992374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125990603_125991621
ES.24317.7	chr4	+	3974	12	Fusion	ENSMUSG00000050188.9_ENSMUSG00000042608.16	novel	413	3	NA	NA	55	-1	multi-exon	TRUE	canonical	0	0	junction_2	103.69033682274	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGTAGCCTGCCTC	NA	False	NA	20	True	AATAAA	-21	NA	125990507	126034820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_125990603_125991621_125992186_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ES.24317.8	chr4	+	1478	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	98	-633	61	633	multi-exon	FALSE	canonical	3	289	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAGATGCTGCACCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	125990513	125993010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_125990603_125991621
ES.24317.9	chr4	+	1390	2	NNC	ENSMUSG00000050188.9	novel	943	2	NA	NA	61	635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGATGCTGCACCTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	125990513	125993012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_125990603_125991711
ES.24318.10	chr4	+	1369	1	NIC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-36	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGCGACTCAGTCTC	7094	False	NA	10	True	AATGAA	-5	NA	126042288	126043657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126042300_126043700
ES.24318.11	chr4	+	633	2	NIC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-27	-124	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTTTGGTGCTATTG	7103	False	NA	NA	False	NA	NA	NA	126042297	126043534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126042425_126043028
ES.24318.12	chr4	+	4704	1	Genic_Genomic	ENSMUSG00000050212.5	novel	NA	NA	NA	NA	-27	3333	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTACTTCTAAACAAT	7103	False	NA	NA	False	NA	NA	NA	126042297	126047001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_126042300_126047000
ES.24318.13	chr4	+	841	3	NNC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-25	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	169.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGCGACTCAGTCTC	7105	False	NA	10	True	AATGAA	-5	NA	126042299	126043657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126042425_126042751_126042839_126043028
ES.24318.2	chr4	+	1171	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	193	0	193	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	6794	False	NA	21	True	AATGAA	-16	NA	126041988	126043668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126042425_126042743_126042839_126043028
ES.24318.3	chr4	+	776	2	NNC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGCGACTCAGTCTC	7001	False	NA	10	True	AATGAA	-5	NA	126042195	126043657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126042425_126043110
ES.24318.4	chr4	+	1252	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	-99	-9	-99	0	multi-exon	FALSE	canonical	3	339	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	7031	False	NA	20	True	AATGAA	-15	NA	126042225	126043667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126042839_126043028
ES.24318.5	chr4	+	767	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	461	136	-68	-126	multi-exon	FALSE	canonical	3	244	junction_1	47.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTCTTTGGTGCTAT	7062	False	NA	NA	False	NA	NA	NA	126042256	126043532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126042425_126042743_126042839_126043028
ES.24318.6	chr4	+	957	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	1	-57	-1	multi-exon	FALSE	canonical	3	53	junction_1	143	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7073	False	NA	19	True	AATGAA	-14	NA	126042267	126043666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126042425_126042676_126042839_126043028
ES.24318.7	chr4	+	3456	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	-2564	-57	2564	multi-exon	FALSE	canonical	3	244	junction_1	47.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAAGATGAGTTGTGT	7073	False	NA	NA	False	NA	NA	NA	126042267	126046232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126042425_126042743_126042839_126043028
ES.24318.8	chr4	+	1138	2	ISM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	10	-57	-1	intron_retention	FALSE	canonical	3	53	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGCGACTCAGTCTC	7073	False	NA	10	True	AATGAA	-5	NA	126042267	126043657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126042425_126042676
ES.24318.9	chr4	+	793	2	NIC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-55	-1	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGTCTCTCACTGGTT	7075	False	NA	19	True	AATGAA	-14	NA	126042269	126043666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126042425_126043028
ES.24319.1	chr4	-	2278	15	NIC	ENSMUSG00000073758.11	novel	2384	16	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	4.14839531306617	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCAGTCTGGTCCTTGTG	1152	False	NA	-1	True	AGTAAA	-20	NA	126057270	126044395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126056245_126056365_126056594_126056659_126056758_126056917_126057017
ES.24319.3	chr4	-	2367	16	FSM	ENSMUSG00000073758.11	ENSMUST00000097891.4	2384	16	16	1	16	-1	multi-exon	FALSE	canonical	2	5	junction_2	4.1505019776729	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCAGTCTGGTCCTTGTG	1154	False	NA	-1	True	AGTAAA	-20	NA	126057268	126044395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126044590_126044669_126044728_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126055968_126056060_126056245_126056365_126056594_126056659_126056758_126056917_126057017
ES.24319.4	chr4	-	2370	9	NIC	ENSMUSG00000073758.11	novel	2071	12	NA	NA	2	3	intron_retention	FALSE	canonical	3	8	junction_8	3.87298334620742	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCAGTCTGGTCCTTG	2005	False	NA	-3	True	AGTAAA	-18	NA	126056417	126044397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055574_126055760_126056060_126056245
ES.24319.5	chr4	-	2691	15	NNC	ENSMUSG00000073758.11	novel	2384	16	NA	NA	13	-8	intron_retention	FALSE	canonical	0	0	junction_5	5.51620987894509	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGAACACTCAGGCCAG	1151	False	NA	-14	True	AGTAAA	-7	NA	126057271	126044408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126044590_126044669_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126050592_126050693_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126056060_126056245_126056365_126056594_126056659_126056758_126056917_126057017
ES.24319.6	chr4	-	2096	14	NIC	ENSMUSG00000073758.11	novel	2384	16	NA	NA	116	-17	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	4.71432413724448	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTCTGAACAC	1254	False	NA	-23	True	NA	NA	NA	126057168	126044417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126044590_126044809_126045667_126045816_126045912_126045998_126046052_126046133_126046228_126054260_126054304_126055127_126055215_126055315_126055417_126055527_126055574_126055760_126055817_126056245_126056365_126056594_126056659_126056758_126056917_126057017
ES.2432.1	chr10	-	3273	1	Intergenic	novelGene_1854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTGTGTTTGTGTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	20409323	20406050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20406000_20409300
ES.24320.1	chr4	+	5178	1	Antisense	novelGene_ENSMUSG00000043962.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTATTTATTCTTACTA	5071	False	NA	NA	False	NA	NA	NA	126063726	126068904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126063700_126068900
ES.24321.1	chr4	+	1597	1	Intergenic	novelGene_19969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAATCTATCCATTCC	NA	False	NA	NA	False	NA	NA	NA	126091697	126093294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126091700_126093300
ES.24322.1	chr4	-	3890	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-22	5	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	237.221554913761	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGTTGCTTGTGTGA	6742	False	NA	2	True	AATAAA	-33	NA	126096485	126057869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.10	chr4	-	4567	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	297.926445060969	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGTGTTTGTTGCTTGT	6767	False	NA	-2	True	AATAAA	-29	NA	126096460	126057873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.100	chr4	-	3435	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-22	684	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	266.682376620578	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6742	False	NA	NA	False	AATAAA	-19	NA	126096485	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065586_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.101	chr4	-	2569	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-491	684	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	260.962521255448	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	126074431	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704
ES.24322.102	chr4	-	3301	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	684	combination_of_known_splicesites	FALSE	canonical	2	64	junction_9	248.262604891785	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6822	False	NA	NA	False	AATAAA	-19	NA	126096405	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126096362
ES.24322.103	chr4	-	5294	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	684	intron_retention	FALSE	canonical	2	34	junction_4	330.552347089938	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6768	False	NA	NA	False	AATAAA	-19	NA	126096459	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126078723_126080382_126088109_126088198_126096362
ES.24322.104	chr4	-	5068	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	684	intron_retention	FALSE	canonical	3	34	junction_4	309.511665489978	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6844	False	NA	NA	False	AATAAA	-19	NA	126096383	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.105	chr4	-	6547	10	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	684	intron_retention	FALSE	canonical	0	0	junction_9	396.87066027568	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6786	False	NA	NA	False	AATAAA	-19	NA	126096441	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126074608_126080227_126080382_126096358
ES.24322.106	chr4	-	5998	7	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	684	intron_retention	FALSE	canonical	2	5	junction_2	395.132748438912	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6788	False	NA	NA	False	AATAAA	-19	NA	126096439	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126074608_126096362
ES.24322.107	chr4	-	3612	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	5	684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	254.886168078391	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6816	False	NA	NA	False	AATAAA	-19	NA	126096411	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080445_126088109_126088198_126096362
ES.24322.108	chr4	-	3452	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	2	684	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	274.47231190049	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6777	False	NA	NA	False	AATAAA	-19	NA	126096450	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060836_126061278_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.109	chr4	-	4900	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	29	682	combination_of_known_junctions	FALSE	canonical	1	17	junction_11	242.126973041791	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	7087	False	NA	NA	False	AATAAA	-17	NA	126096140	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126094738
ES.24322.11	chr4	-	3772	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	257.145950775041	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6767	False	NA	-3	True	AATAAA	-28	NA	126096460	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.110	chr4	-	2789	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	682	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	277.897263190714	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	6790	False	NA	NA	False	AATAAA	-17	NA	126096437	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126096362
ES.24322.111	chr4	-	3723	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	218	682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	246.767498563136	1200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	7276	False	NA	NA	False	AATAAA	-17	NA	126095951	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095726
ES.24322.112	chr4	-	4911	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-5	682	intron_retention	FALSE	canonical	3	517	junction_10	120.4044849663	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	6806	False	NA	NA	False	AATAAA	-17	NA	126096421	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.113	chr4	-	3699	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	5	682	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	315.480088041089	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	6769	False	NA	NA	False	AATAAA	-17	NA	126096458	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.114	chr4	-	3992	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	6	682	combination_of_known_junctions	FALSE	canonical	1	38	junction_10	247.168950315366	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	7050	False	NA	NA	False	AATAAA	-17	NA	126096177	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126095595
ES.24322.115	chr4	-	7848	10	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-10	682	intron_retention	FALSE	non_canonical	0	0	junction_3	270.497666633783	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	6801	False	NA	NA	False	AATAAA	-17	NA	126096426	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126062259_126064916_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.116	chr4	-	2877	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	682	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	255.6	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGGACCAAACTGC	6790	False	NA	NA	False	AATAAA	-17	NA	126096437	126058651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.117	chr4	-	3421	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.870677295078	1198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTCCTGAGTTTTATT	6788	False	NA	NA	False	ACTAAA	-23	NA	126096439	126058799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074602_126080227_126080382_126088109_126088198_126096362
ES.24322.118	chr4	-	2181	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	186	534	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	349.226198186791	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTCCTGAGTTTTATT	NA	False	NA	NA	False	ACTAAA	-23	NA	126072133	126058799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ES.24322.119	chr4	-	3364	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	87	927	-3	532	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGTCCTGAGTTTTA	6761	False	NA	NA	False	ACTAAA	-21	NA	126096466	126058801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.12	chr4	-	4146	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	248.776011971073	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6814	False	NA	-3	True	AATAAA	-28	NA	126096413	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059274_126060766_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.120	chr4	-	3446	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	532	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGTCCTGAGTTTTA	6767	False	NA	NA	False	ACTAAA	-21	NA	126096460	126058801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.121	chr4	-	3893	14	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	31	492	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	350.919131263017	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTCATTTGGAACTAAA	7089	False	NA	NA	False	NA	NA	NA	126096138	126058841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088206_126094738_126094797_126095314_126095422_126095726
ES.24322.122	chr4	-	3276	8	NIC	ENSMUSG00000043962.17	novel	2744	7	NA	NA	0	374	intron_retention	FALSE	canonical	3	517	junction_7	124.559632469016	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGTCAATATTATTG	6775	False	NA	NA	False	AATAAA	-19	NA	126096452	126066261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.123	chr4	-	5659	5	NIC	ENSMUSG00000043962.17	novel	2744	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	431	junction_4	190.984783425277	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTATTGACCATCAT	6788	False	NA	NA	False	AATAAA	-22	NA	126096439	126066636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126067322_126069128_126069241_126069976_126074608_126080227_126080382_126096362
ES.24322.124	chr4	-	4058	1	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-743	-1467	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126074683	126070625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126070600_126074700
ES.24322.125	chr4	-	4231	2	FSM	ENSMUSG00000043962.17	ENSMUST00000124327.2	590	2	11	-3652	0	3652	multi-exon	FALSE	canonical	3	517	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	6775	False	NA	NA	False	NA	NA	NA	126096452	126084056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126088198_126096362
ES.24322.13	chr4	-	5619	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	431	junction_9	144.685695966408	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6787	False	NA	-3	True	AATAAA	-28	NA	126096440	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126096362
ES.24322.14	chr4	-	4371	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	353.385047413635	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6774	False	NA	-3	True	AATAAA	-28	NA	126096453	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065586_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.15	chr4	-	3676	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	255.6	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6768	False	NA	-3	True	AATAAA	-28	NA	126096459	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.16	chr4	-	4276	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	271.40147383535	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6768	False	NA	-3	True	AATAAA	-28	NA	126096459	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069136_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.17	chr4	-	3464	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	258.54786790844	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6773	False	NA	-3	True	AATAAA	-28	NA	126096454	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126080227_126080382_126088109_126088198_126096362
ES.24322.18	chr4	-	4857	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_11	233.690725900496	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	7050	False	NA	-3	True	AATAAA	-28	NA	126096177	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095595
ES.24322.19	chr4	-	3406	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	330.167366649098	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6795	False	NA	-3	True	AATAAA	-28	NA	126096432	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074334_126080291_126080382_126096362
ES.24322.2	chr4	-	4395	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	-13	-4	-13	4	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTGTTGCTTGTGTG	6661	False	NA	1	True	AATAAA	-32	NA	126096566	126057870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.20	chr4	-	4168	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	259.738406863521	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6776	False	NA	-3	True	AATAAA	-28	NA	126096451	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.21	chr4	-	3415	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	42	junction_7	350.413327372119	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6787	False	NA	-3	True	AATAAA	-28	NA	126096440	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126096362
ES.24322.22	chr4	-	4372	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.870677295078	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6750	False	NA	-3	True	AATAAA	-28	NA	126096477	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074590_126080227_126080382_126088109_126088198_126096362
ES.24322.23	chr4	-	4388	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	309.37773567814	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6814	False	NA	-3	True	AATAAA	-28	NA	126096413	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126094738_126094801_126096362
ES.24322.24	chr4	-	5368	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-2114	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	415.65269155871	1205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	False	NA	-3	True	AATAAA	-28	NA	126076054	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126072586_126072795_126073704
ES.24322.25	chr4	-	3592	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	277.897263190714	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126096362
ES.24322.26	chr4	-	4222	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	37	junction_9	251.976586213878	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126088109_126088198_126096362
ES.24322.27	chr4	-	4081	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	262.396425847458	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6768	False	NA	-3	True	AATAAA	-28	NA	126096459	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058875_126059077_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.28	chr4	-	5776	7	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-661	0	intron_retention	FALSE	canonical	3	676	junction_6	75.7351012117602	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	False	NA	-3	True	AATAAA	-28	NA	126074601	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ES.24322.29	chr4	-	6747	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	68	junction_6	258.435463682694	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6796	False	NA	-3	True	AATAAA	-28	NA	126096431	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126067322_126069128_126069241_126069976_126070150_126072167_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.3	chr4	-	4522	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-52	4	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTGTTGCTTGTGTG	6622	False	NA	1	True	AATAAA	-32	NA	126096605	126057870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.30	chr4	-	5738	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	517	junction_10	120.4044849663	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6756	False	NA	-3	True	AATAAA	-28	NA	126096471	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.31	chr4	-	4234	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	247.106093586547	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6806	False	NA	-3	True	AATAAA	-28	NA	126096421	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065586_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.32	chr4	-	5470	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	7	junction_8	253.091105015598	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6788	False	NA	-3	True	AATAAA	-28	NA	126096439	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126072586_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.33	chr4	-	3645	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.28978693347	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6806	False	NA	-3	True	AATAAA	-28	NA	126096421	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058504_126059192_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.34	chr4	-	4177	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	266.682376620578	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6775	False	NA	-3	True	AATAAA	-28	NA	126096452	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065586_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.35	chr4	-	4867	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	291.313807388184	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6844	False	NA	-3	True	AATAAA	-28	NA	126096383	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126080227_126080382_126096362
ES.24322.38	chr4	-	4155	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	64	junction_9	248.262604891785	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6743	False	NA	-3	True	AATAAA	-28	NA	126096484	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126096362
ES.24322.4	chr4	-	4508	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-24	3	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	315.480088041089	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTGTTGCTTGTGT	6740	False	NA	0	True	AATAAA	-31	NA	126096487	126057871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.40	chr4	-	7156	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	517	junction_9	120.242450547135	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6843	False	NA	-3	True	AATAAA	-28	NA	126096384	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.41	chr4	-	5903	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	517	junction_10	118.764009699909	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6799	False	NA	-3	True	AATAAA	-28	NA	126096428	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.42	chr4	-	6028	8	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	62	0	intron_retention	FALSE	non_canonical	0	0	junction_3	296.503295228961	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	False	NA	-3	True	AATAAA	-28	NA	126073878	126057874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126062259_126064916_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ES.24322.43	chr4	-	3744	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248.776011971073	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGACTGTGTTTGTTGCTT	6787	False	NA	-4	True	AATAAA	-27	NA	126096440	126057875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058865_126060785_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.48	chr4	-	5802	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	7	1	intron_retention	FALSE	canonical	3	34	junction_4	328.77293075921	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6794	False	NA	-6	True	AATAAA	-25	NA	126096433	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126096362
ES.24322.49	chr4	-	4006	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	339.373524142484	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6811	False	NA	-6	True	AATAAA	-25	NA	126096416	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.5	chr4	-	5108	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	3	intron_retention	FALSE	canonical	3	68	junction_7	270.845088063998	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTGTTGCTTGTGT	6788	False	NA	0	True	AATAAA	-31	NA	126096439	126057871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126074608_126080227_126080382_126096362
ES.24322.50	chr4	-	12828	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	517	junction_8	123.72190337608	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6788	False	NA	-6	True	AATAAA	-25	NA	126096439	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126080382_126088109_126088198_126096362
ES.24322.51	chr4	-	5932	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	1	intron_retention	FALSE	canonical	3	34	junction_4	276.290149867092	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6778	False	NA	-6	True	AATAAA	-25	NA	126096449	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126096362
ES.24322.52	chr4	-	4765	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	38	junction_10	247.168950315366	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	7051	False	NA	-6	True	AATAAA	-25	NA	126096176	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126095595
ES.24322.53	chr4	-	5980	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	1	intron_retention	FALSE	canonical	2	4	junction_9	309.265111338006	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6765	False	NA	-6	True	AATAAA	-25	NA	126096462	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126078723_126078978_126080227_126080382_126088109_126088198_126096362
ES.24322.54	chr4	-	2635	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	294.331764340854	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6815	False	NA	-6	True	AATAAA	-25	NA	126096412	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126080227_126080382_126096362
ES.24322.55	chr4	-	2767	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	269.519233606714	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6771	False	NA	-6	True	AATAAA	-25	NA	126096456	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126080227_126080382_126088109_126088198_126096362
ES.24322.56	chr4	-	4774	14	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	353.926295272345	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6768	False	NA	-6	True	AATAAA	-25	NA	126096459	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126078723_126078936_126080227_126080382_126088109_126088198_126096362
ES.24322.59	chr4	-	4323	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.870677295078	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6808	False	NA	-6	True	AATAAA	-25	NA	126096419	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074602_126080227_126080382_126088109_126088198_126096362
ES.24322.6	chr4	-	4529	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	246.221059045231	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTGTTGCTTGTGT	7061	False	NA	0	True	AATAAA	-31	NA	126096166	126057871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095915
ES.24322.60	chr4	-	2529	8	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	301.499314650455	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6767	False	NA	-6	True	AATAAA	-25	NA	126096460	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126096362
ES.24322.62	chr4	-	5381	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	1	intron_retention	FALSE	canonical	3	34	junction_4	351.188466272706	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6790	False	NA	-6	True	AATAAA	-25	NA	126096437	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.63	chr4	-	7276	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	2	1	intron_retention	FALSE	canonical	3	517	junction_9	124.947198724645	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6777	False	NA	-6	True	AATAAA	-25	NA	126096450	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.64	chr4	-	1778	5	NNC	ENSMUSG00000043962.17	novel	378	4	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	325.07797141609	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6780	False	NA	-6	True	AATAAA	-25	NA	126096447	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126088109_126088198_126096362
ES.24322.65	chr4	-	4251	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	1	intron_retention	FALSE	canonical	3	68	junction_6	248.341075941939	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6768	False	NA	-6	True	AATAAA	-25	NA	126096459	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.66	chr4	-	4314	8	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-30	1	intron_retention	FALSE	canonical	1	1	junction_7	302.19408549163	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	NA	False	NA	-6	True	AATAAA	-25	NA	126073970	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072087
ES.24322.67	chr4	-	3772	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.28978693347	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	6768	False	NA	-6	True	AATAAA	-25	NA	126096459	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058465_126059061_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.68	chr4	-	4923	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	312.803041953808	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGACTGTGTTTGTTGC	7088	False	NA	-6	True	AATAAA	-25	NA	126096139	126057877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095314_126095422_126095595
ES.24322.69	chr4	-	5477	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	68	junction_6	286.592017291131	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6807	False	NA	-7	True	AATAAA	-24	NA	126096420	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126074608_126080227_126080382_126096362
ES.24322.7	chr4	-	4074	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	281.463152424681	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTGTTGCTTGTGT	6785	False	NA	0	True	AATAAA	-31	NA	126096442	126057871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.70	chr4	-	2661	10	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	337.77127186717	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6742	False	NA	-7	True	AATAAA	-24	NA	126096485	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059332_126060778_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126080227_126080382_126088109_126088198_126096362
ES.24322.71	chr4	-	3458	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	268.317889824738	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6808	False	NA	-7	True	AATAAA	-24	NA	126096419	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058704_126060798_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.72	chr4	-	4442	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	316.000219760824	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6741	False	NA	-7	True	AATAAA	-24	NA	126096486	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126083615_126083663_126088109_126088198_126096362
ES.24322.73	chr4	-	4428	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	257.861668341768	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	7067	False	NA	-7	True	AATAAA	-24	NA	126096160	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126095915
ES.24322.74	chr4	-	2833	6	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	34	junction_3	413.83523291281	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	1078	False	NA	-7	True	AATAAA	-24	NA	126069228	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128
ES.24322.75	chr4	-	4202	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	319.59726723353	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6767	False	NA	-7	True	AATAAA	-24	NA	126096460	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065586_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080315_126088109_126088198_126096362
ES.24322.76	chr4	-	6671	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1762	0	intron_retention	FALSE	canonical	3	34	junction_4	349.226198186791	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	NA	False	NA	-7	True	AATAAA	-24	NA	126075702	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ES.24322.79	chr4	-	4398	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	312.079617245343	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6808	False	NA	-7	True	AATAAA	-24	NA	126096419	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095351_126095422_126096362
ES.24322.80	chr4	-	4334	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	254.886168078391	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6808	False	NA	-7	True	AATAAA	-24	NA	126096419	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072357_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.81	chr4	-	4616	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	297.799837232252	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGGACTGTGTTTGTTG	6774	False	NA	-7	True	AATAAA	-24	NA	126096453	126057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126078723_126078978_126080227_126080382_126088109_126088198_126096362
ES.24322.82	chr4	-	4736	14	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	386.287090097937	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACGGACTGTGTTTGTT	6777	False	NA	-8	True	AATAAA	-23	NA	126096450	126057879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072795_126073704_126074608_126078723_126078978_126080227_126080382_126088109_126088198_126096362
ES.24322.83	chr4	-	4465	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	312.079617245343	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACGGACTGTGTTTGTT	6777	False	NA	-8	True	AATAAA	-23	NA	126096450	126057879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126095314_126095422_126096362
ES.24322.84	chr4	-	5869	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	34	junction_4	309.511665489978	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACGGACTGTGTTTGTT	6813	False	NA	-8	True	AATAAA	-23	NA	126096414	126057879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.85	chr4	-	1702	4	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	360.371413344005	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAACGGACTGTGTTTGT	6765	False	NA	-9	True	AATAAA	-22	NA	126096462	126057880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126096362
ES.24322.86	chr4	-	4208	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	244.28978693347	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAACGGACTGTGTTTGT	6796	False	NA	-9	True	AATAAA	-22	NA	126096431	126057880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126058267_126058396_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.87	chr4	-	3951	13	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	356.460571296306	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTAAACGGACTGTGTT	6771	False	NA	-12	True	AATAAA	-19	NA	126096456	126057883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126087703_126087808_126088109_126088198_126096362
ES.24322.89	chr4	-	5563	6	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	589	-10	intron_retention	FALSE	canonical	3	779	junction_2	42.9371633902381	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCAGATGTAAACGGACT	NA	False	NA	-17	True	AATAAA	-14	NA	126071730	126057888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126067322_126069128_126069241_126069976
ES.24322.9	chr4	-	4319	12	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	253.332858488753	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTTTGTTGCTTGTG	6756	False	NA	-1	True	AATAAA	-30	NA	126096471	126057872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080315_126088109_126088198_126096362
ES.24322.91	chr4	-	4357	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	4	-30	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	325.951499713208	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAATAAATGAA	6768	False	NA	-37	True	AAAACA	-31	NA	126096459	126057908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126095314_126095422_126096362
ES.24322.92	chr4	-	2904	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-1	-30	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	321.747665104193	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAATAAATGAA	6786	False	NA	-37	True	AAAACA	-31	NA	126096441	126057908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126080227_126080382_126088109_126088198_126096362
ES.24322.93	chr4	-	5364	11	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-19	-34	intron_retention	FALSE	canonical	2	4	junction_9	368.479375270856	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGCAAATAAAAACAATAAA	6745	False	NA	-41	True	AAAACA	-27	NA	126096482	126057912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126074608_126078723_126078978_126080227_126080382_126096362
ES.24322.94	chr4	-	3886	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-12	-451	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTTCAATATTTTT	6799	False	NA	NA	False	AATACA	-11	NA	126096428	126058329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.95	chr4	-	3616	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-8	691	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACTGCTTGGATCTT	6756	False	NA	NA	False	AATAAA	-26	NA	126096471	126058642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24322.97	chr4	-	3581	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	23	774	23	685	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGACCAAACTGCTTG	6697	False	NA	NA	False	AATAAA	-20	NA	126096530	126058648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ES.24322.98	chr4	-	3815	8	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	-382	685	intron_retention	FALSE	canonical	3	68	junction_7	278.933098554811	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGACCAAACTGCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	126074322	126058648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167
ES.24322.99	chr4	-	3768	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	3	684	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	297.926445060969	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGGACCAAACTGCTT	6790	False	NA	NA	False	AATAAA	-19	NA	126096437	126058649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
ES.24323.1	chr4	+	175	1	Intergenic	novelGene_19970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATACTAGTT	123	False	NA	NA	False	NA	NA	NA	126104103	126104278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126104100_126104300
ES.24324.1	chr4	-	175	1	Intergenic	novelGene_19971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	126113382	126113207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126113200_126113400
ES.24325.1	chr4	-	119	1	Intergenic	novelGene_19972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	126116425	126116306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126116300_126116400
ES.24326.1	chr4	+	175	1	Intergenic	novelGene_19973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	126116735	126116910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126116700_126116900
ES.24327.1	chr4	+	160	1	Intergenic	novelGene_19974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	1782	False	NA	NA	False	NA	NA	NA	126118938	126119098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126118900_126119100
ES.24328.1	chr4	-	325	1	Intergenic	novelGene_19975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGGGAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126123173	126122848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126122800_126123200
ES.24328.10	chr4	-	3318	18	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_13	63.2753635019	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150148	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.11	chr4	-	3367	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-163	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150299	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.12	chr4	-	3137	18	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	83.3835511896473	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150075	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136053_126149809
ES.24328.13	chr4	-	3154	17	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	77.2501769819979	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150092	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130560_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.14	chr4	-	3392	17	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	10	0	intron_retention	FALSE	canonical	3	52	junction_12	62.4189474438652	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150126	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.17	chr4	-	4690	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	46	junction_11	62.7767118886897	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150094	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.18	chr4	-	3556	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	-205	0	-145	0	multi-exon	FALSE	canonical	3	86	junction_12	56.4079726191254	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150281	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.19	chr4	-	3098	17	NNC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	82.1150108080124	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150096	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130833_126130985_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.2	chr4	-	3935	6	ISM	ENSMUSG00000028849.18	ENSMUST00000125981.8	2363	12	6190	-2924	-373	2924	3prime_fragment	FALSE	canonical	3	247	junction_5	22.2261107708929	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	126127714	126123035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685
ES.24328.22	chr4	-	3543	14	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-20	0	intron_retention	FALSE	canonical	3	98	junction_9	49.958207385845	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150096	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.24	chr4	-	3372	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-19	0	intron_retention	FALSE	canonical	3	86	junction_12	57.8520472844307	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150095	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.25	chr4	-	3252	16	NNC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-18	0	intron_retention	FALSE	canonical	1	2	junction_10	77.6131145848146	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150094	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130560_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.29	chr4	-	3252	18	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	91.6175290340095	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150094	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126557_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128011_126128111_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.3	chr4	-	5043	15	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	1	1410	intron_retention	FALSE	canonical	3	86	junction_10	58.221252869672	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCAAGCGATTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	126150075	126124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.30	chr4	-	3444	14	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-21	-3	intron_retention	FALSE	canonical	3	98	junction_9	51.5187103370504	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150097	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.31	chr4	-	3366	17	NNC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-20	-3	intron_retention	FALSE	canonical	0	0	junction_10	80.6959716699043	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150096	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130560_126130684_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.32	chr4	-	1972	12	NNC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	79.1099245688507	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150094	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130714_126150035
ES.24328.35	chr4	-	3567	14	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	98	junction_9	51.4251337256232	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150135	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127440_126127685_126127791_126127890_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.36	chr4	-	3353	15	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	98	junction_10	48.3203595067042	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150094	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.38	chr4	-	3237	16	NNC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_14	83.7744591149355	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150091	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135635_126135807_126136161_126149809
ES.24328.39	chr4	-	3441	15	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	98	junction_10	49.7126436510422	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150095	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.4	chr4	-	4678	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	23	1410	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTCCAAGCGATTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	126150113	126124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.40	chr4	-	3084	17	NNC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.8249431479079	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150097	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128820_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.41	chr4	-	3186	16	NNC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-18	-3	intron_retention	FALSE	canonical	0	0	junction_9	78.0784221152041	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	False	NA	-3	True	AATAAA	-18	NA	126150094	126125962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128820_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.43	chr4	-	3254	16	NNC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	-17	-4	intron_retention	FALSE	non_canonical	0	0	junction_15	84.7525548615235	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTACGTGTCCTTGGA	NA	False	NA	-4	True	AATAAA	-17	NA	126150093	126125963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136171_126149809
ES.24328.44	chr4	-	3265	18	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	79.5190560609003	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTACGTGTCCTTGGA	NA	False	NA	-4	True	AATAAA	-17	NA	126150096	126125963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130560_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.45	chr4	-	3330	17	NNC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	30	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	72.4607652457521	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCTACGTGTCCTTGG	NA	False	NA	-5	True	AATAAA	-16	NA	126150106	126125964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132416_126133851_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.47	chr4	-	3341	15	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-20	-5	intron_retention	FALSE	canonical	3	98	junction_10	49.6447070570017	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCTACGTGTCCTTGG	NA	False	NA	-5	True	AATAAA	-16	NA	126150096	126125964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.48	chr4	-	3264	18	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	79.8502491150593	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCTACGTGTCCTTGG	NA	False	NA	-5	True	AATAAA	-16	NA	126150094	126125964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134663_126135569_126135643_126135809_126136161_126149809
ES.24328.5	chr4	-	3319	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	-70	0	-4	0	multi-exon	FALSE	canonical	3	86	junction_13	57.8802606030247	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150140	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.50	chr4	-	3343	16	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	98	junction_11	52.7318583864526	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAACCTACGTGTCCTTG	NA	False	NA	-6	True	AATAAA	-15	NA	126150096	126125965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.51	chr4	-	3430	15	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	98	junction_10	52.7620766715439	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAACCTACGTGTCCTT	NA	False	NA	-7	True	AATAAA	-14	NA	126150086	126125966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.52	chr4	-	1614	7	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	-21	-2909	intron_retention	FALSE	canonical	3	98	junction_2	61.1846022750459	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTCTCCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	126150097	126130321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.6	chr4	-	3203	18	NNC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.8550590121064	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150093	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128820_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.7	chr4	-	3299	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150135	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.8	chr4	-	3207	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	-12	0	-12	0	multi-exon	FALSE	canonical	3	46	junction_12	60.9301598143317	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150148	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24328.9	chr4	-	3267	16	NIC	ENSMUSG00000028849.18	novel	3195	17	NA	NA	24	0	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150112	126125959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ES.24329.1	chr4	+	1231	5	NNC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	162.187391618461	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTCCTGTTTTCCTT	7654	False	NA	43	True	AATAAA	-23	NA	126156146	126169674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126156257_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ES.24329.2	chr4	+	1302	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	32	2	32	-2	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTCCTGTTTTCCTT	7657	False	NA	43	True	AATAAA	-23	NA	126156149	126169674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ES.24329.3	chr4	+	1506	5	NNC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.193483427327	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCCTGTCCTGTTTTCC	7663	False	NA	41	True	AATAAA	-21	NA	126156155	126169672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126168078_126168934
ES.24329.4	chr4	+	2029	4	NNC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	-35	-8	intron_retention	FALSE	canonical	2	3	junction_1	182.43050427187	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAATCCTGTCCTGTT	7665	False	NA	37	True	AATAAA	-17	NA	126156157	126169668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126156257_126166470_126166569_126166767_126167866_126168934
ES.24329.7	chr4	+	2093	4	NIC	ENSMUSG00000028847.9	novel	1336	5	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	373	junction_3	14.0554457615387	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTCCTGTTTTCCTT	7681	False	NA	43	True	AATAAA	-23	NA	126156173	126169674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126156331_126166470_126166569_126166767_126167866_126168934
ES.24329.8	chr4	+	1494	1	Intergenic	novelGene_19976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126160395	126161889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126160400_126161900
ES.24329.9	chr4	+	3436	4	ISM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	8033	7	7958	-7	3prime_fragment	FALSE	canonical	3	345	junction_2	24.5130350811336	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAATCCTGTCCTGTTT	NA	False	NA	38	True	AATAAA	-18	NA	126164150	126169669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126166569_126166767_126166868_126167682_126167866_126168934
ES.2433.1	chr10	+	213	1	Intergenic	novelGene_1855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAACACCAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20753686	20753899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_20753700_20753900
ES.24330.1	chr4	-	3022	5	Antisense	novelGene_ENSMUSG00000028847.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAAAAGTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	126172911	126165296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126167929_126168101_126168212_126168874_126168974_126172273_126172378_126172834
ES.24331.11	chr4	-	2688	2	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	15	-3	intron_retention	FALSE	canonical	3	386	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7091	False	NA	NA	False	AATAAA	-12	NA	126215481	126209847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126212289_126215234
ES.24331.12	chr4	-	1722	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	21	-3	intron_retention	FALSE	canonical	3	306	junction_2	36.0416425818802	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7097	False	NA	NA	False	AATAAA	-12	NA	126215475	126209847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126210659_126211095_126211197_126211512_126211985_126212191_126212289_126215234
ES.24331.13	chr4	-	3211	7	NNC	ENSMUSG00000042558.17	novel	1710	6	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	157.411350713134	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7389	False	NA	NA	False	AATAAA	-12	NA	126215183	126209847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126212410_126212614_126213577
ES.24331.14	chr4	-	2161	4	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	26	-3	intron_retention	FALSE	canonical	3	286	junction_2	40.9226913419275	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7102	False	NA	NA	False	AATAAA	-12	NA	126215470	126209847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126210659_126211095_126211698_126211776_126212289_126215234
ES.24331.15	chr4	-	1933	4	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	17	-3	intron_retention	FALSE	canonical	3	306	junction_2	33.5194802399374	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAGCATGTCCTGTT	7093	False	NA	NA	False	AATAAA	-12	NA	126215479	126209847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126210659_126211095_126211197_126211512_126212289_126215234
ES.24331.16	chr4	-	2087	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	12	-5	intron_retention	FALSE	canonical	3	286	junction_2	46.5617869072913	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATCCCAGCATGTCCTG	7088	False	NA	NA	False	AATAAA	-10	NA	126215484	126209849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ES.24331.17	chr4	-	1430	1	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	14	-2109	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTACGAACATTGCAA	7090	False	NA	NA	False	NA	NA	NA	126215482	126214052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126214100_126215500
ES.24331.3	chr4	-	2489	3	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	14	-1	intron_retention	FALSE	canonical	3	386	junction_2	2	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7090	False	NA	NA	False	AATAAA	-19	NA	126215482	126209840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126211985_126212191_126212289_126215234
ES.24331.4	chr4	-	2052	4	FSM	ENSMUSG00000042558.17	ENSMUST00000128188.8	1826	4	-222	-4	14	-1	multi-exon	FALSE	canonical	3	330	junction_1	27.3901847788988	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7090	False	NA	NA	False	AATAAA	-19	NA	126215482	126209840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126210659_126211095_126211985_126212191_126212289_126215234
ES.24331.5	chr4	-	2247	3	NIC	ENSMUSG00000042558.17	novel	1826	4	NA	NA	26	-1	intron_retention	FALSE	canonical	3	330	junction_1	28	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7102	False	NA	NA	False	AATAAA	-19	NA	126215470	126209840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126210659_126211095_126212289_126215234
ES.24331.6	chr4	-	2816	4	NIC	ENSMUSG00000042558.17	novel	1710	6	NA	NA	1538	-1	intron_retention	FALSE	canonical	3	306	junction_2	35.3270434653114	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	8956	False	NA	NA	False	AATAAA	-19	NA	126213616	126209840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126210659_126211095_126211197_126211512_126211985_126212191
ES.24331.8	chr4	-	1685	6	NNC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	144.401662040296	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTCCTGTTCCTGTCT	7090	False	NA	NA	False	AATAAA	-19	NA	126215482	126209840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126210659_126211095_126211197_126211484_126211698_126211776_126211985_126212191_126212289_126215234
ES.24331.9	chr4	-	4499	3	ISM	ENSMUSG00000042558.17	ENSMUST00000151191.8	1710	6	68	3	60	2	intron_retention	FALSE	canonical	3	306	junction_2	12	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATGTCCTGTTCCTGT	7478	False	NA	NA	False	AATAAA	-17	NA	126215094	126209842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126210659_126211095_126211197_126211512
ES.24332.2	chr4	-	1376	7	ISM	ENSMUSG00000028845.16	ENSMUST00000030658.13	1492	10	480	2	480	-2	intron_retention	FALSE	canonical	3	6	junction_6	3.0368111930481	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCAGGCTCTTTTCTG	4060	False	NA	NA	False	AATAAA	-11	NA	126218512	126215917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022
ES.24333.1	chr4	+	179	1	Intergenic	novelGene_19978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTTTTAAAAAGGT	6274	False	NA	NA	False	NA	NA	NA	126280295	126280474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126280300_126280500
ES.24334.1	chr4	+	232	1	Intergenic	novelGene_19979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-10	NA	126306985	126307217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126307000_126307200
ES.24335.1	chr4	+	4538	2	Antisense	novelGene_ENSMUSG00000041530.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAGGCATGATGGCAC	NA	False	NA	NA	False	TTTAAA	-7	NA	126336013	126340751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126339365_126339564
ES.24336.1	chr4	+	178	1	Intergenic	novelGene_19982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGTTCAATGTTAT	NA	False	NA	NA	False	NA	NA	NA	126351919	126352097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126351900_126352100
ES.24337.1	chr4	-	3041	20	NNC	ENSMUSG00000028842.16	novel	682	4	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.8085838463946	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCATCCTGTGAGCTA	2395	False	NA	NA	False	AATAAA	-12	NA	126323318	126225503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126225742_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126286263_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.10	chr4	-	5685	20	NNC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	3	2818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	10.4960090027662	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTTAATGCCAACAAAC	2382	False	NA	NA	False	AATAAA	-10	NA	126323331	126236551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126269129_126269270_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301651_126311020_126311193_126323060
ES.24337.11	chr4	-	4920	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	38	10637	23	2208	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGATTTTCATGTGGT	2402	False	NA	NA	False	TTTAAA	-15	NA	126323311	126237161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.12	chr4	-	3723	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	8	11864	-7	981	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGTCGGACATCTTT	2372	False	NA	NA	False	NA	NA	NA	126323341	126238388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.13	chr4	-	2958	18	ISM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	9	13676	-6	-831	5prime_fragment	FALSE	canonical	2	3	junction_5	10.554849325815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACAGAGTGTGATTTC	2373	False	NA	NA	False	AATAAA	-37	NA	126323340	126240200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.14	chr4	-	3500	5	NIC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	33	1393	intron_retention	FALSE	canonical	1	1	junction_1	14.7309198626562	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATACTCTTAAAGAAAAAT	2412	False	NA	NA	False	NA	NA	NA	126323301	126268077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126270835_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.15	chr4	-	3756	7	NNC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	4	1393	intron_retention	FALSE	canonical	2	6	junction_1	13.1582251420505	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATACTCTTAAAGAAAAAT	2383	False	NA	NA	False	NA	NA	NA	126323330	126268077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126270835_126286263_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.16	chr4	-	1365	8	NNC	ENSMUSG00000028842.16	novel	625	4	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	12.2690917449051	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTGTCCTTTCATAA	2415	False	NA	NA	False	ATTAAA	-18	NA	126323298	126269470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126269734_126270699_126270835_126286263_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.17	chr4	-	969	5	NIC	ENSMUSG00000028842.16	novel	613	3	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.9499163877261	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTGTCCTTTCATAA	2375	False	NA	NA	False	ATTAAA	-18	NA	126323338	126269470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126269734_126270699_126270835_126301534_126301656_126311020_126311193_126323060
ES.24337.18	chr4	-	1194	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	33	-84	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTTTTGTCACTA	2412	False	NA	NA	False	AATAAA	-16	NA	126323301	126269554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.19	chr4	-	157	1	Intergenic	novelGene_19977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	126272515	126272358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126272400_126272500
ES.24337.2	chr4	-	6868	1	ISM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	89957	0	10721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTCAGTATTTC	8919	False	NA	2	True	AATAAA	-15	NA	126233392	126226524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126226500_126233400
ES.24337.20	chr4	-	1955	4	NIC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	5	4675	intron_retention	FALSE	canonical	3	31	junction_1	3.39934634239519	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAATTTGTAAATCCT	2384	False	NA	NA	False	AATAAA	-18	NA	126323329	126296813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.21	chr4	-	357	2	ISM	ENSMUSG00000028842.16	ENSMUST00000123233.2	613	3	0	9621	0	-9621	5prime_fragment	FALSE	canonical	3	39	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTTTCAAGTTGAAAT	2379	False	NA	NA	False	ATTAAA	-10	NA	126323334	126311109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126311193_126323060
ES.24337.22	chr4	-	6685	1	Genic_Genomic	ENSMUSG00000028842.16_ENSMUSG00000041530.18	novel	NA	NA	NA	NA	-5733	6407	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTCTTGAGAAAGGAAGC	9532	False	NA	NA	False	NA	NA	NA	126329082	126322397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_126322400_126329100
ES.24337.23	chr4	-	1737	1	Intergenic	novelGene_19980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAATATATGTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	126325866	126324129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126324100_126325900
ES.24337.24	chr4	-	6542	1	Genic_Genomic	ENSMUSG00000041530.18	novel	NA	NA	NA	NA	5192	3384	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTAGTTCATGCTTTT	6652	False	NA	NA	False	NA	NA	NA	126331962	126325420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_126325400_126332000
ES.24337.25	chr4	-	7347	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-67	-53	-67	53	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCATAGGTTTTAGGG	NA	False	NA	33	True	AATAAA	-18	NA	126362443	126328751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ES.24337.27	chr4	-	7088	19	NNC	ENSMUSG00000041530.18	novel	7065	19	NA	NA	548	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.94131331123066	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGTCTGTTTTTTTTTT	NA	False	NA	-20	True	TATAAA	-26	NA	126361666	126328804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347609_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126361627
ES.24337.29	chr4	-	7927	19	NNC	ENSMUSG00000041530.18	novel	7065	19	NA	NA	-3109	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	3.49955905511636	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAAGTGCAGTCTGT	NA	False	NA	-29	True	TATAAA	-17	NA	126358684	126328813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126357788
ES.24337.3	chr4	-	7372	1	ISM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	88602	851	9366	-851	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGGCAGTCTGACCAT	7564	False	NA	NA	False	AATAAA	-37	NA	126234747	126227375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126227400_126234700
ES.24337.30	chr4	-	9627	20	Fusion	ENSMUSG00000041530.18_ENSMUSG00000082381.2	novel	7065	19	NA	NA	-5803	-10	multi-exon	FALSE	canonical	0	0	junction_18	3.90539083349245	127	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTAAAGTGCAGTCTG	NA	False	NA	-30	True	TATAAA	-16	NA	126376895	126328814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126370075_126372585_126376807
ES.24337.31	chr4	-	5362	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-58	1923	-58	1386	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGCCCATGTCTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	126362434	126330727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ES.24337.32	chr4	-	3128	19	NNC	ENSMUSG00000041530.18	novel	7227	19	NA	NA	-24	353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4.10810701051915	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGTGGTCAAATGCTG	NA	False	NA	NA	False	NA	NA	NA	126362400	126332942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337054_126342564_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ES.24337.33	chr4	-	3100	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-54	4181	-54	310	multi-exon	FALSE	canonical	2	5	junction_8	3.48364786813131	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAAGACTCATGCTCAA	NA	False	NA	NA	False	NA	NA	NA	126362430	126332985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ES.24337.34	chr4	-	2785	18	ISM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	-43	4715	-43	-224	5prime_fragment	FALSE	canonical	2	5	junction_7	3.58292760772731	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCGGTGTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	126362419	126333519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ES.24337.35	chr4	-	176	1	Intergenic	novelGene_19981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	126339558	126339382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126339400_126339600
ES.24337.36	chr4	-	4317	1	Intergenic	novelGene_19983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGAGGTTCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	126376932	126372615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126372600_126376900
ES.24337.4	chr4	-	5085	1	NIC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	4086	4427	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATCCTGACTTGAGTAT	9472	False	NA	NA	False	NA	NA	NA	126240027	126234942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126234900_126240000
ES.24337.5	chr4	-	7147	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	1	8447	1	4398	multi-exon	FALSE	canonical	2	3	junction_6	10.4927958825138	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGTGAGGTCTTCCT	2365	False	NA	NA	False	AATAAA	-17	NA	126323348	126234971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.6	chr4	-	6760	17	NIC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	26	4397	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	9.9339616342122	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGAGTGAGGTCTTCC	2405	False	NA	NA	False	AATAAA	-16	NA	126323308	126234972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126301534_126301656_126311020_126311193_126323060
ES.24337.7	chr4	-	7050	19	NIC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	23	4396	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	11.0214437449103	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGAGTGAGGTCTTC	2402	False	NA	NA	False	AATAAA	-15	NA	126323311	126234973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126239376_126240423_126240566_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ES.24337.8	chr4	-	5577	19	NNC	ENSMUSG00000028842.16	novel	15595	19	NA	NA	-6	2837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.5264217830921	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGCTTAGAATTTTAA	2373	False	NA	NA	False	AATAAA	-29	NA	126323340	126236532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264051_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301651_126311020_126311193_126323060
ES.24338.1	chr4	-	6467	18	NNC	ENSMUSG00000042500.12	novel	6537	18	NA	NA	75	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.78155068647927	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTCTCATCAGTGG	2317	False	NA	NA	False	AATAAA	-21	NA	126427190	126383333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126387125_126390541_126390742_126391003_126391106_126400536_126400672_126400803_126401120_126402140_126402301_126403743_126403929_126405192_126405327_126405518_126405648_126405791_126405912_126406312_126406461_126409679_126409768_126410629_126410765_126410862_126411000_126411168_126411351_126413983_126414110_126419790_126419957_126426977
ES.24338.3	chr4	-	3457	18	FSM	ENSMUSG00000042500.12	ENSMUST00000084289.5	6537	18	21	3059	21	-3059	multi-exon	FALSE	canonical	0	0	junction_1	2.71991247569339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGACTGGCTTTTGTG	2263	False	NA	NA	False	NA	NA	NA	126427244	126386392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126387125_126390541_126390742_126391003_126391106_126400536_126400672_126400803_126401120_126402140_126402301_126403743_126403929_126405192_126405327_126405518_126405648_126405791_126405912_126406312_126406461_126409679_126409768_126410629_126410765_126410862_126411000_126411168_126411351_126413983_126414105_126419790_126419957_126426977
ES.24338.4	chr4	-	7373	2	FSM	ENSMUSG00000042500.12	ENSMUST00000122951.2	574	2	-2932	-3867	-2932	3867	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAAAAATGGTCTTAGA	NA	False	NA	NA	False	AATAAA	-20	NA	126413637	126405402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126409768_126410629
ES.24338.5	chr4	-	1835	9	NIC	ENSMUSG00000042500.12	novel	6537	18	NA	NA	-63	3865	intron_retention	FALSE	canonical	1	2	junction_4	2.82566363886433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACATAAAAATGGTCTTA	2179	False	NA	NA	False	AATAAA	-18	NA	126427328	126405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126405912_126406312_126406461_126409679_126409768_126410629_126410765_126410862_126411000_126411168_126411351_126413983_126414105_126419790_126419957_126426977
ES.24339.1	chr4	+	179	1	Intergenic	novelGene_19984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATATTTATATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	126440755	126440934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126440800_126440900
ES.2434.1	chr10	-	180	1	Intergenic	novelGene_1856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	20802985	20802805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20802800_20803000
ES.24340.1	chr4	+	182	1	Intergenic	novelGene_19985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATCTAATTCC	NA	False	NA	NA	False	NA	NA	NA	126443659	126443841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126443700_126443800
ES.24341.1	chr4	+	5303	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	15	11	intron_retention	FALSE	canonical	1	26	junction_4	21.999842171151	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	41	True	AATAAA	-34	NA	126450742	126487707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.10	chr4	+	5340	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	29	-383	intron_retention	FALSE	canonical	1	26	junction_4	23.4034660301038	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTATTAGTCGCTT	NA	False	NA	9	True	AATAAA	-11	NA	126450756	126487313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.11	chr4	+	4222	1	FSM	ENSMUSG00000098831.3	ENSMUST00000185054.3	59	1	-2894	-1269	-2894	1269	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTTAAGCAGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	126450758	126454980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126450800_126455000
ES.24341.12	chr4	+	3566	18	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-29	4086	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	15.4034553261974	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCACTTCTTGTTTTG	NA	False	NA	NA	False	TTTAAA	-8	NA	126450758	126475627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224
ES.24341.14	chr4	+	4857	25	ISM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	32	379	-28	-379	intron_retention	FALSE	canonical	1	1	junction_10	26.4354231519418	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTAGTCGCTTTCTT	NA	False	NA	13	True	AATAAA	-15	NA	126450759	126487317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.15	chr4	+	5017	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.0542331921584	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGTCCAGCTCTAGT	NA	False	NA	29	True	AATAAA	-22	NA	126450767	126487695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455717_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.16	chr4	+	4663	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-20	642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	26.1905631860027	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCTATTTTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	126450767	126488338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126487840
ES.24341.17	chr4	+	5236	25	ISM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	40	-8	-20	8	intron_retention	FALSE	canonical	1	1	junction_10	26.4354231519418	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCTAGTGGTCATTTC	NA	False	NA	38	True	AATAAA	-31	NA	126450767	126487704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.18	chr4	+	5227	25	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_21	28.9323924578202	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGTCCAGCTCTAGT	NA	False	NA	29	True	AATAAA	-22	NA	126450770	126487695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455698_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484341_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.19	chr4	+	4853	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-16	-383	intron_retention	FALSE	canonical	2	10	junction_4	26.6215438549725	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTATTAGTCGCTT	NA	False	NA	9	True	AATAAA	-11	NA	126450771	126487313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455698_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.2	chr4	+	5170	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	15	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	25.9699518674949	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCTCTAGTGGTCAT	NA	False	NA	35	True	AATAAA	-28	NA	126450742	126487701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486721
ES.24341.21	chr4	+	5259	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-13	11	intron_retention	FALSE	canonical	1	13	junction_1	25.1900760331436	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	41	True	AATAAA	-34	NA	126450774	126487707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.22	chr4	+	4722	24	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-13	-379	intron_retention	FALSE	canonical	0	0	junction_6	27.2375255434771	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTAGTCGCTTTCTT	NA	False	NA	13	True	AATAAA	-15	NA	126450774	126487317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459813_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.23	chr4	+	5150	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_6	27.2375255434771	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGTCCAGCTCTAGT	NA	False	NA	29	True	AATAAA	-22	NA	126450774	126487695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.25	chr4	+	5256	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-11	13	intron_retention	FALSE	canonical	2	10	junction_4	23.6806003583806	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGTCATTTCTTCGG	NA	False	NA	43	True	AATAAA	-36	NA	126450776	126487709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455698_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.26	chr4	+	4626	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-11	-379	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	25.7776337160725	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTAGTCGCTTTCTT	NA	False	NA	13	True	AATAAA	-15	NA	126450776	126487317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.27	chr4	+	5153	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	26.0797546000724	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTGTCCAGCTCTAG	NA	False	NA	28	True	AATAAA	-21	NA	126450778	126487694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486695
ES.24341.29	chr4	+	5389	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-6	3	intron_retention	FALSE	canonical	1	1	junction_9	26.927403628322	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCAGCTCTAGTGGTC	NA	False	NA	33	True	AATAAA	-26	NA	126450781	126487699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.3	chr4	+	4670	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	17	-379	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	22.9307130285999	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTAGTCGCTTTCTT	NA	False	NA	13	True	AATAAA	-15	NA	126450744	126487317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.30	chr4	+	5689	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-6	3	intron_retention	FALSE	canonical	1	13	junction_1	26.307179786768	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCAGCTCTAGTGGTC	NA	False	NA	33	True	AATAAA	-26	NA	126450781	126487699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.31	chr4	+	458	1	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-5	-2839	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126450782	126451240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450800_126451200
ES.24341.32	chr4	+	4973	26	FSM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	64	-10	4	10	multi-exon	FALSE	canonical	1	1	junction_10	26.925794324402	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTAGTGGTCATTTCTT	NA	False	NA	40	True	AATAAA	-33	NA	126450791	126487706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.33	chr4	+	5932	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	4	5	intron_retention	FALSE	canonical	1	26	junction_4	22.4721629942654	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCTCTAGTGGTCAT	NA	False	NA	35	True	AATAAA	-28	NA	126450791	126487701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.35	chr4	+	5102	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	27.2832842597808	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCTCTAGTGGTCATT	NA	False	NA	36	True	AATAAA	-29	NA	126450796	126487702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455698_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486721
ES.24341.36	chr4	+	4575	26	FSM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	71	381	1	-381	multi-exon	FALSE	canonical	1	1	junction_10	26.925794324402	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTATTAGTCGCTTTC	NA	False	NA	11	True	AATAAA	-13	NA	126450798	126487315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.37	chr4	+	5117	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1072	11	intron_retention	FALSE	canonical	1	26	junction_3	22.215817182388	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	NA	False	NA	41	True	AATAAA	-34	NA	126452998	126487707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.38	chr4	+	4549	25	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1060	-379	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	29.97681395679	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATTAGTCGCTTTCTT	NA	False	NA	13	True	AATAAA	-15	NA	126453010	126487317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486721
ES.24341.39	chr4	+	5594	23	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-316	642	intron_retention	FALSE	canonical	1	26	junction_2	22.458823663108	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCTATTTTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	126453754	126488338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.40	chr4	+	4223	24	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-111	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	27.0385847662664	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATTTTCTTACTCTTGC	NA	False	NA	NA	False	AATAAA	-30	NA	126453959	126488342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126487764
ES.24341.41	chr4	+	4990	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	47	642	combination_of_known_junctions	FALSE	canonical	1	26	junction_2	23.5258776396239	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCTATTTTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	126454117	126488338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.42	chr4	+	4566	22	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	1478	3	intron_retention	FALSE	canonical	1	26	junction_1	22.929152442819	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCAGCTCTAGTGGTC	NA	False	NA	33	True	AATAAA	-26	NA	126455548	126487699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.43	chr4	+	4324	20	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1625	0	intron_retention	FALSE	canonical	3	53	junction_4	20.0246385631423	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126458722	126487696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.44	chr4	+	5550	16	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-1011	-1	intron_retention	FALSE	canonical	3	53	junction_2	21.763782351012	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTGTCCAGCTCTAGT	NA	False	NA	29	True	AATAAA	-22	NA	126459336	126487695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.45	chr4	+	3636	18	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-192	7	intron_retention	FALSE	canonical	2	4	junction_1	27.1520134411803	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTCTAGTGGTCATTT	NA	False	NA	37	True	AATAAA	-30	NA	126460155	126487703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126460257_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.46	chr4	+	135	1	Intergenic	novelGene_19986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	126462840	126462975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126462800_126463000
ES.24341.47	chr4	+	4653	15	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	-84	11	intron_retention	FALSE	canonical	3	53	junction_1	20.4200781545207	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAGTGGTCATTTCTTC	-15	True	NA	41	True	AATAAA	-34	NA	126466123	126487707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126466264_126466928_126467141_126468433_126468610_126468887_126469836_126470134_126470290_126471405_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.48	chr4	+	2895	16	ISM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	17704	-10	2224	10	3prime_fragment	FALSE	canonical	3	36	junction_15	21.6846079563875	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTAGTGGTCATTTCTT	2293	False	NA	40	True	AATAAA	-33	NA	126468431	126487706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.49	chr4	+	4425	3	ISM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	33555	-1880	9171	1880	intron_retention	FALSE	canonical	3	89	junction_1	1	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGAGCTACAACAAACAT	NA	False	NA	NA	False	NA	NA	NA	126484282	126489576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126484436_126484976_126485060_126485387
ES.24341.5	chr4	+	5055	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	12	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	22.9307130285999	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTGGTCATTTCTTCG	NA	False	NA	42	True	AATAAA	-35	NA	126450750	126487708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24341.6	chr4	+	4907	25	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	-378	intron_retention	FALSE	non_canonical	0	0	junction_4	24.8825016605825	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTAGTCGCTTTCTTT	NA	False	NA	14	True	AATAAA	-16	NA	126450750	126487318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455714_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.7	chr4	+	7046	25	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	1880	intron_retention	FALSE	canonical	1	4	junction_8	26.014385710389	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGAGCTACAACAAACAT	NA	False	NA	NA	False	NA	NA	NA	126450750	126489576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460257_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.8	chr4	+	4890	25	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	-381	intron_retention	FALSE	non_canonical	0	0	junction_4	27.6666352911469	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTATTAGTCGCTTTC	NA	False	NA	11	True	AATAAA	-13	NA	126450750	126487315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455712_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
ES.24341.9	chr4	+	5650	24	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	23	-378	intron_retention	FALSE	canonical	1	26	junction_4	23.6727851370232	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTAGTCGCTTTCTTT	NA	False	NA	14	True	AATAAA	-16	NA	126450750	126487318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ES.24342.1	chr4	-	183	1	Intergenic	novelGene_19987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	126498884	126498701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126498700_126498900
ES.24343.1	chr4	+	254	1	Intergenic	novelGene_19988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGGTGCCGAGCTGGA	7260	False	NA	NA	False	AATAGA	-31	NA	126503108	126503362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126503100_126503400
ES.24344.1	chr4	+	183	1	Intergenic	novelGene_19989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	126534837	126535020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126534800_126535000
ES.24345.1	chr4	-	175	1	Intergenic	novelGene_19990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGGAAATAAAATC	NA	False	NA	NA	False	NA	NA	NA	126549199	126549024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126549000_126549200
ES.24346.1	chr4	+	211	1	Intergenic	novelGene_19991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1139	False	NA	NA	False	NA	NA	NA	126567181	126567392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126567200_126567400
ES.24347.1	chr4	+	865	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	-5	-1	-5	1	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGGGTTTGGCCTTAG	5375	False	NA	20	True	AATAAA	-22	NA	126571417	126603508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.10	chr4	+	742	5	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-7	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	1535.00999589579	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATCTTTCTGGGTTT	5419	False	NA	12	True	AATAAA	-14	NA	126571461	126603500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126577914_126578038_126599850_126600014_126601346_126601397_126603271
ES.24347.11	chr4	+	659	5	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1531.06374377424	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGGTTTGGCCTTAGT	5419	False	NA	21	True	AATAAA	-23	NA	126571461	126603509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126577914_126578038_126580821_126580893_126601346_126601397_126603271
ES.24347.12	chr4	+	2376	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1426.83467858053	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATCTTTCTGGGTTT	5419	False	NA	12	True	AATAAA	-14	NA	126571461	126603500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126602960_126603271
ES.24347.13	chr4	+	3954	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	39	-3134	-10	3134	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAATCAGTTTCTT	5419	False	NA	NA	False	NA	NA	NA	126571461	126606641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.14	chr4	+	5474	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1408.10354732882	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGATCTTTCTGGGT	5419	False	NA	10	True	AATAAA	-12	NA	126571461	126603498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126576302_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.15	chr4	+	3825	2	NIC	ENSMUSG00000028837.9	novel	708	5	NA	NA	-10	-9	intron_retention	FALSE	canonical	1	13	junction_1	0	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGATCTTTCTGGGT	5419	False	NA	10	True	AATAAA	-12	NA	126571461	126603498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126599850
ES.24347.18	chr4	+	5448	5	ISM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	1683	4	1609	-4	3prime_fragment	FALSE	canonical	3	3349	junction_2	140.309256644029	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATCTTTCTGGGTTTGGC	7063	False	NA	15	True	AATAAA	-17	NA	126573105	126603503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.19	chr4	+	6003	3	NIC	ENSMUSG00000028837.9	novel	708	5	NA	NA	5709	-8	intron_retention	FALSE	canonical	3	3349	junction_1	164	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGATCTTTCTGGGTT	NA	False	NA	11	True	AATAAA	-13	NA	126577205	126603499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126580893_126599850_126600014_126601346
ES.24347.2	chr4	+	1341	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	37	-519	-12	519	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGGTTTATGAGGCA	5417	False	NA	NA	False	NA	NA	NA	126571459	126604026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.3	chr4	+	2690	5	FSM	ENSMUSG00000028837.9	ENSMUST00000150372.2	708	5	-37	-1945	-12	-7	multi-exon	FALSE	canonical	3	3349	junction_3	124.252515065088	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATCTTTCTGGGTTT	5417	False	NA	12	True	AATAAA	-14	NA	126571459	126603500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346
ES.24347.4	chr4	+	812	6	NNC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1426.83467858053	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTGGGTTTGGCCTT	5417	False	NA	18	True	AATAAA	-20	NA	126571459	126603506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603280
ES.24347.5	chr4	+	1958	3	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	13	junction_1	1689.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTCTGGGTTTGGCCTT	5419	False	NA	18	True	AATAAA	-20	NA	126571461	126603506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126599850_126601397_126603271
ES.24347.6	chr4	+	690	5	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-7	combination_of_known_splicesites	FALSE	canonical	3	136	junction_1	1450.30695026949	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATCTTTCTGGGTTT	5419	False	NA	12	True	AATAAA	-14	NA	126571461	126603500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ES.24347.8	chr4	+	1641	1	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-7976	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAGAATACTAT	5419	False	NA	NA	False	NA	NA	NA	126571461	126573102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571500_126573100
ES.24347.9	chr4	+	623	4	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	1	13	junction_1	1664.12345962939	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTTCTGGGTTTGGCC	5419	False	NA	16	True	AATAAA	-18	NA	126571461	126603504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126571639_126599850_126600014_126601346_126601397_126603271
ES.24348.1	chr4	-	2123	7	FSM	ENSMUSG00000042477.8	ENSMUST00000048194.8	2085	7	-42	4	-42	-4	multi-exon	TRUE	canonical	0	0	junction_4	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAAAAGTCCAGA	NA	False	NA	NA	False	ATTAAA	-5	NA	126630075	126609802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126610589_126613204_126613347_126614278_126614398_126615647_126615871_126628392_126628445_126628962_126629446_126629757
ES.24349.1	chr4	+	194	1	Intergenic	novelGene_19992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTCATGTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	126631230	126631424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126631200_126631400
ES.2435.1	chr10	+	4883	24	FSM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	-32	0	-32	0	multi-exon	FALSE	canonical	3	12	junction_5	6.91700734047638	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGTTTCTTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	20828413	20956328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ES.2435.10	chr10	+	4711	24	NNC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.31674467360719	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGCTCCTGGTTTCTTT	NA	False	NA	11	True	AATAAA	-16	NA	20828544	20956323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846783_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ES.2435.11	chr10	+	3416	3	ISM	ENSMUSG00000019986.18	ENSMUST00000163505.3	2067	7	29813	1	788	-1	3prime_fragment	FALSE	canonical	3	20	junction_1	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTCCTGGTTTCTTTCTT	NA	False	NA	14	True	AATAAA	-19	NA	20946531	20956326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20948501_20950273_20950377_20954982
ES.2435.12	chr10	+	3355	2	NIC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	2624	0	intron_retention	FALSE	canonical	3	21	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGTTTCTTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	20948367	20956328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20950377_20954982
ES.2435.2	chr10	+	4836	23	NIC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	8.20048375916308	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTGGTTTCTTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	20828432	20956327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ES.2435.3	chr10	+	4558	21	NIC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	9.38829057922687	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGCTCCTGGTTTCTTTC	NA	False	NA	12	True	AATAAA	-17	NA	20828446	20956324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20893811_20893933_20917084_20917141_20948441_20948501_20950273_20950377_20954982
ES.2435.5	chr10	+	3598	17	NIC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	-21	-51779	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	8.16911102874725	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCACTAATTATTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	20828502	20894588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20893811
ES.2435.6	chr10	+	3619	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	66	61737	-12	-51776	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAATTATTTTTCATTA	NA	False	NA	NA	False	AATAAA	-23	NA	20828511	20894591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
ES.2435.7	chr10	+	3240	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	78	62104	0	-52143	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGTGATTTTATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	20828523	20894224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
ES.2435.8	chr10	+	4716	24	NNC	ENSMUSG00000019986.18	novel	4851	24	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.28166718373511	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTGGTTTCTTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	20828528	20956327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844937_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ES.24350.1	chr4	+	259	1	Intergenic	novelGene_19993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATAATTACAGTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	126634511	126634770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126634500_126634800
ES.24351.1	chr4	+	4292	21	ISM	ENSMUSG00000028830.15	ENSMUST00000102608.10	4073	24	-26	15734	-15	0	5prime_fragment	FALSE	canonical	2	17	junction_1	12.2363188909083	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647321	126748129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126647456_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.10	chr4	+	4360	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	26	-2	2	2	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTATGAGGTTGTGCT	NA	False	NA	20	True	ATTAAA	-20	NA	126647588	126748131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.13	chr4	+	4050	20	NNC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.0501292268768	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647593	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733480_126734986_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.17	chr4	+	4265	22	NNC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	15.3060982615077	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647620	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740212_126740270_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.18	chr4	+	143	1	Intergenic	novelGene_19995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	855	False	NA	NA	False	NA	NA	NA	126678554	126678697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126678600_126678700
ES.24351.19	chr4	+	3989	19	ISM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	38003	1	-24490	-1	3prime_fragment	FALSE	canonical	2	43	junction_13	7.96210158993184	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGCTATGAGGTTGT	7866	False	NA	17	True	ATTAAA	-17	NA	126685565	126748128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.20	chr4	+	3827	17	NNC	ENSMUSG00000028830.15	novel	827	4	NA	NA	-8313	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.5544247061308	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126720758	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126720846_126720949_126721672_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.21	chr4	+	2783	13	NNC	ENSMUSG00000028830.15	novel	827	4	NA	NA	-829	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7693556439169	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126728242	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126728322_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.22	chr4	+	1838	6	ISM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	88648	0	7139	0	3prime_fragment	FALSE	canonical	2	50	junction_4	5.98665181883831	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126736210	126748129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.3	chr4	+	4380	21	NIC	ENSMUSG00000028830.15	novel	4073	24	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	14.5995719115322	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647336	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126647561_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.4	chr4	+	4216	21	NIC	ENSMUSG00000028830.15	novel	4073	24	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	13.383198421902	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGCTATGAGGTTGT	NA	False	NA	17	True	ATTAAA	-17	NA	126647337	126748128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126647397_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.5	chr4	+	4470	21	ISM	ENSMUSG00000028830.15	ENSMUST00000102608.10	4073	24	1	15529	1	205	intron_retention	FALSE	canonical	2	17	junction_1	12.2363188909083	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTACAGCATTTGTTCCG	NA	False	NA	NA	False	NA	NA	NA	126647348	126748334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126647456_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.8	chr4	+	4560	23	NNC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.052760183243	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647571	126748129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126647639_126650691_126650862_126681769_126681991_126682073_126682188_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24351.9	chr4	+	4209	21	NIC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.138031576133	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGGCTATGAGGTTG	NA	False	NA	16	True	ATTAAA	-16	NA	126647585	126748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126647639_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ES.24352.1	chr4	-	4242	7	NNC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	3	-4	intron_retention	FALSE	canonical	1	1	junction_5	81.8548851457396	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTTGTGGTCTGCCTT	NA	False	NA	-5	True	NA	NA	NA	126647228	126637546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126645186_126645733_126645875_126646763
ES.24352.10	chr4	-	3745	7	NNC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	-1	-12	intron_retention	FALSE	canonical	0	0	junction_3	81.9079768195178	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAAGCCTCCTTTGTGG	NA	False	NA	-13	True	NA	NA	NA	126647221	126637554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641171_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ES.24352.11	chr4	-	3862	7	NNC	ENSMUSG00000028833.14	novel	2375	7	NA	NA	-8	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	92.5300251570027	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAAGCCTCCTTTGTGG	NA	False	NA	-13	True	NA	NA	NA	126647210	126637554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126645186_126645733_126645875_126647117
ES.24352.12	chr4	-	5654	5	ISM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-9	12	-9	-12	intron_retention	FALSE	canonical	3	197	junction_3	17.4427635425124	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAAGCCTCCTTTGTGG	NA	False	NA	-13	True	NA	NA	NA	126647211	126637554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677
ES.24352.13	chr4	-	3431	8	NNC	ENSMUSG00000028833.14	novel	2434	8	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.549224014559	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAAGCCTCCTTTGTG	NA	False	NA	-14	True	NA	NA	NA	126647200	126637555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645066_126645186_126645733_126645875_126647117
ES.24352.14	chr4	-	4647	5	NIC	ENSMUSG00000028833.14	novel	2375	7	NA	NA	-255	-13	intron_retention	TRUE	canonical	0	0	junction_1	96.4650195666802	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAAGCCTCCTTTGTG	NA	False	NA	-14	True	NA	NA	NA	126647486	126637555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126640482_126642270_126642513_126643677_126644647_126645733_126645875_126647117
ES.24352.15	chr4	-	3663	7	NNC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	-6	-14	intron_retention	FALSE	canonical	0	0	junction_4	77.6604074731062	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGAAGCCTCCTTTGT	NA	False	NA	-15	True	NA	NA	NA	126647208	126637556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642503_126643677_126644647_126645733_126645875_126646763
ES.24352.16	chr4	-	4269	7	NNC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	12	-14	intron_retention	FALSE	canonical	0	0	junction_6	81.6076317237276	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGAAGCCTCCTTTGT	NA	False	NA	-15	True	NA	NA	NA	126647190	126637556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646149
ES.24352.17	chr4	-	3509	7	NNC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	12	-14	intron_retention	FALSE	canonical	1	3	junction_3	80.8743881996437	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGAAGCCTCCTTTGT	NA	False	NA	-15	True	NA	NA	NA	126647190	126637556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642416_126642513_126643677_126644647_126645733_126645875_126646763
ES.24352.18	chr4	-	4633	2	NIC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	6	-2953	intron_retention	FALSE	canonical	3	191	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCATCCACACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	126647196	126641476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126644647_126645733
ES.24352.2	chr4	-	4049	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-373	5	-344	-5	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTGTGGTCTGCCT	NA	False	NA	-6	True	NA	NA	NA	126647575	126637547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ES.24352.3	chr4	-	3787	8	NNC	ENSMUSG00000028833.14	novel	2434	8	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_5	96.7019405499313	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTGTGGTCTGCCT	NA	False	NA	-6	True	NA	NA	NA	126647200	126637547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645473_126645587_126645733_126645875_126646763
ES.24352.4	chr4	-	3376	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	-27	-974	-27	-7	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTTGTGGTCTGC	NA	False	NA	-8	True	NA	NA	NA	126647258	126637549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
ES.24352.5	chr4	-	3551	8	NNC	ENSMUSG00000028833.14	novel	2434	8	NA	NA	46	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	76.4401860333707	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCCTCCTTTGTGGTCTG	NA	False	NA	-9	True	NA	NA	NA	126647156	126637550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126638555_126638630_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ES.24352.6	chr4	-	4945	6	NIC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	1	-9	intron_retention	FALSE	canonical	3	145	junction_5	29.8368899183544	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	-10	True	NA	NA	NA	126647201	126637551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ES.24352.7	chr4	-	4584	6	ISM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	-23	9	-5	-9	intron_retention	FALSE	canonical	3	191	junction_5	19.3225257148231	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	-10	True	NA	NA	NA	126647225	126637551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733
ES.24352.8	chr4	-	3396	8	FSM	ENSMUSG00000028833.14	ENSMUST00000106116.2	2434	8	10	-972	-8	-9	multi-exon	FALSE	canonical	1	7	junction_7	74.1771184258271	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCTCCTTTGTGGTCT	NA	False	NA	-10	True	NA	NA	NA	126647210	126637551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763_126646834_126647117
ES.24352.9	chr4	-	5193	3	NIC	ENSMUSG00000028833.14	novel	3681	7	NA	NA	2018	-10	intron_retention	FALSE	canonical	3	236	junction_1	0.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGCCTCCTTTGTGGTC	NA	False	NA	-11	True	NA	NA	NA	126645184	126637552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126639065_126640338_126642513_126643677
ES.24353.1	chr4	-	181	1	Intergenic	novelGene_19994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	126655280	126655099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126655100_126655300
ES.24354.1	chr4	-	169	1	Intergenic	novelGene_19996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	126690133	126689964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126690000_126690100
ES.24355.1	chr4	+	4094	1	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCTACATACAGGATG	1045	False	NA	NA	False	NA	NA	NA	126754920	126759014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126754900_126759000
ES.24356.1	chr4	+	6030	1	Intergenic	novelGene_19997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAATACTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	126777173	126783203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126777200_126783200
ES.24356.2	chr4	+	3350	2	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAATACTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	126777173	126783203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126778550_126781229
ES.24357.1	chr4	+	192	1	Intergenic	novelGene_19998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTATATAC	NA	False	NA	NA	False	NA	NA	NA	126793008	126793200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126793000_126793200
ES.24358.1	chr4	+	6997	1	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGTAATAACTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	126807929	126814926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126807900_126814900
ES.24358.2	chr4	+	176	1	Intergenic	novelGene_20000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGT	4186	False	NA	NA	False	NA	NA	NA	126812772	126812948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126812800_126812900
ES.24359.1	chr4	+	9196	3	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAAAATAAAGTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	126818859	126830595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126820489_126820530_126825599_126828096
ES.24359.2	chr4	+	296	1	Intergenic	novelGene_20001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAATATTAATAA	NA	False	NA	NA	False	NA	NA	NA	126822900	126823196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126822900_126823200
ES.2436.1	chr10	-	158	1	Intergenic	novelGene_1857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20859022	20858864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20858900_20859000
ES.24360.1	chr4	+	159	1	Intergenic	novelGene_20002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	9487	False	NA	NA	False	NA	NA	NA	126859885	126860044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126859900_126860000
ES.24361.1	chr4	+	1656	1	Antisense	novelGene_ENSMUSG00000042446.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGAGTTGTTATTCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	126861513	126863169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126861500_126863200
ES.24362.1	chr4	-	9734	30	Fusion	ENSMUSG00000042446.17_ENSMUSG00000088984.3	novel	7102	30	NA	NA	-21	1590	multi-exon	FALSE	canonical	0	0	junction_9	61.1143253337449	536	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTACCCATTTCAT	NA	False	NA	NA	False	NA	NA	NA	126861949	126753182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126784034_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.10	chr4	-	7040	28	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-89	116	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	65.0008124883271	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCCTTGGTTTTTAT	NA	False	NA	NA	False	AAAAAG	-15	NA	126862017	126755615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.100	chr4	-	5302	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-37	-1683	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_20	60.6413427372745	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861965	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.101	chr4	-	5147	29	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	6	-1683	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	65.3057955986719	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861710	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.104	chr4	-	5539	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	61	-1689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	78.9692556209905	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATAGTGGTCTGGA	NA	False	NA	NA	False	AATAAA	-18	NA	126861867	126757420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126825235_126825423_126842226_126842273_126861608
ES.24362.106	chr4	-	848	1	NIC	ENSMUSG00000042446.17	novel	5799	24	NA	NA	5998	-1689	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATAGTGGTCTGGA	NA	False	NA	NA	False	AATAAA	-18	NA	126758268	126757420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126757400_126758300
ES.24362.107	chr4	-	5597	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-75	-1690	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	74.3	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATAGTGGTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	126862003	126757421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126811545_126811659_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.108	chr4	-	4969	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-82	-1690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	61.8433154291174	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATAGTGGTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	126862010	126757421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126842226_126842273_126861608
ES.24362.109	chr4	-	5313	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-55	-1690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.7923097222974	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATAGTGGTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	126861983	126757421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.111	chr4	-	5095	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	35	-1691	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	66.4436522820008	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAAGATAGTGGTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	126861657	126757422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819818_126861608
ES.24362.112	chr4	-	5429	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-83	-1692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	89.3442220397637	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAAGATAGTGGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	126862011	126757423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126807299_126807390_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.114	chr4	-	5440	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-30	766	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_13	36.3868107973205	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126861958	126761689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.115	chr4	-	5012	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-30	338	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_13	36.3868107973205	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGTGTTTCCCCCTC	NA	False	NA	NA	False	NA	NA	NA	126861958	126762117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.116	chr4	-	4843	2	ISM	ENSMUSG00000042446.17	ENSMUST00000135003.2	5799	24	38864	17374	-13811	-10650	internal_fragment	FALSE	canonical	3	296	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATAGAGGGGGCGGGT	NA	False	NA	NA	False	NA	NA	NA	126778077	126773105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126776104_126776232
ES.24362.117	chr4	-	7066	25	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-80	-10650	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_24	67.1263190435267	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATAGAGGGGGCGGGT	NA	False	NA	NA	False	NA	NA	NA	126862008	126773105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861604
ES.24362.118	chr4	-	7635	21	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-50	-10671	intron_retention	FALSE	canonical	0	0	junction_1	82.3233107934806	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126861978	126773126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126776405_126783788_126783969_126784807_126784862_126787087_126787260_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.120	chr4	-	1908	10	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-5	45245	-5	-1902	5prime_fragment	FALSE	canonical	3	222	junction_6	30.9479850358271	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGATTGAGAATACCA	NA	False	NA	NA	False	NA	NA	NA	126861933	126800976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.121	chr4	-	2729	8	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-69	759	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	98.1005315261558	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTTCTATGCTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	126861997	126803516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126804796_126804902_126805078_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.122	chr4	-	3979	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-106	50722	-106	-2178	5prime_fragment	FALSE	canonical	3	222	junction_3	34.4141443789226	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGATACCTAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	126862034	126806453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.123	chr4	-	3225	7	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-91	51461	-91	1548	5prime_fragment	FALSE	canonical	3	222	junction_3	34.4141443789226	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACATCACTAATTCATT	NA	False	NA	NA	False	NA	NA	NA	126862019	126807192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.125	chr4	-	6286	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-97	56057	-97	-3048	5prime_fragment	FALSE	canonical	3	222	junction_1	26.3818119165458	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTTCATTTATTTACA	NA	False	NA	NA	False	NA	NA	NA	126862025	126811788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.126	chr4	-	1184	1	Intergenic	novelGene_19999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126813140	126811956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126812000_126813100
ES.24362.127	chr4	-	4485	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	261	57500	25	3396	5prime_fragment	FALSE	canonical	3	222	junction_1	26.3818119165458	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACGTTTGGGAATTG	NA	False	NA	NA	False	AATACA	-20	NA	126861667	126813231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.128	chr4	-	4449	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-114	57911	-114	2985	5prime_fragment	FALSE	canonical	3	222	junction_1	26.3818119165458	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTGCCTAATTAGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	126862042	126813642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.129	chr4	-	4333	5	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-26	2948	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	108.314357312408	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTCTTCTATTGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	126861954	126813679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.13	chr4	-	9423	18	NNC	ENSMUSG00000042446.17	novel	5799	24	NA	NA	9077	113	intron_retention	FALSE	canonical	3	165	junction_14	37.548768749482	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAAGTTCCTTGGTTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	126799834	126755618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664
ES.24362.130	chr4	-	3733	5	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-65	58578	-65	2318	5prime_fragment	FALSE	canonical	3	222	junction_1	26.3818119165458	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGATCATCAGTTAAT	NA	False	NA	NA	False	CATAAA	-16	NA	126861993	126814309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.131	chr4	-	2920	2	ISM	ENSMUSG00000042446.17	ENSMUST00000123597.2	711	4	-295	20370	-83	-20370	5prime_fragment	FALSE	canonical	3	258	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGATATTTCTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	126862011	126839755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126842273_126861608
ES.24362.14	chr4	-	4627	17	NNC	ENSMUSG00000042446.17	novel	5799	24	NA	NA	10580	111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0721636590741	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAAAGTTCCTTGGTT	NA	False	NA	NA	False	AAAAAG	-10	NA	126798331	126755620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759398_126762498_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189
ES.24362.15	chr4	-	6811	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0714963965161	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861735	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758013_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.16	chr4	-	7192	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862021	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.17	chr4	-	7006	29	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	65.3304395097003	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861983	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.18	chr4	-	6885	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.3515411007667	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861978	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.19	chr4	-	7924	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	19421	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	61.8956082976055	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126842271	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126785941_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226
ES.24362.2	chr4	-	7907	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-82	-723	-82	723	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTCCTCTGTGAAATGA	NA	False	NA	NA	False	AGTAAA	-18	NA	126862010	126755008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.20	chr4	-	7122	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	61.0516437982118	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861973	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804604_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.21	chr4	-	6781	27	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_18	80.1100297335192	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861986	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.22	chr4	-	7201	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_29	64.2608203503864	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862018	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.24	chr4	-	6972	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.7344433143794	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861679	126755731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758116_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793877_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.28	chr4	-	7040	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-58	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	59.6943746708761	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGAGTTCTTTTTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	126861986	126755732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.29	chr4	-	6359	27	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	79.2980390305009	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGAGTTCTTTTTCTT	NA	False	NA	-11	True	AATAAA	-19	NA	126861978	126755732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126842226_126842273_126861608
ES.24362.3	chr4	-	7129	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	102	120	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_29	64.2608203503864	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGGTTTTTATTCAC	NA	False	NA	NA	False	AAAAAG	-19	NA	126861826	126755611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.31	chr4	-	6826	29	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-50	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	63.1534715545215	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTGAGTTCTTTTTCT	NA	False	NA	-12	True	AATAAA	-18	NA	126861766	126755733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.33	chr4	-	6784	28	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	48	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	65.0008124883271	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126861880	126755734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.35	chr4	-	6852	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	188	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_29	64.798948186587	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126861504	126755734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861431
ES.24362.36	chr4	-	7199	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-80	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	78.6324855034902	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126862008	126755734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819833_126842226_126842273_126861604
ES.24362.37	chr4	-	7054	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-65	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.9268693341989	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126861993	126755734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126771421_126771574_126776007_126776104_126776232_126776405_126783311_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.38	chr4	-	7093	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-74	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	60.7651763655763	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGAGTTCTTTTTC	NA	False	NA	-13	True	AATAAA	-17	NA	126862002	126755734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798286_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.4	chr4	-	7296	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-74	-120	-74	120	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGGTTTTTATTCAC	NA	False	NA	NA	False	AAAAAG	-19	NA	126862002	126755611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.40	chr4	-	12501	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	165	junction_13	36.7194905691013	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGGGTGAGTTCTTT	NA	False	NA	-16	True	AATAAA	-14	NA	126861723	126755737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126759420_126762509_126762759_126763975_126764088_126771421_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.42	chr4	-	6825	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	18781	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	65.6130877869784	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGGGTGAGTTCTT	NA	False	NA	-17	True	AATAAA	-13	NA	126842911	126755738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126842861
ES.24362.43	chr4	-	7057	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	61.9432240862879	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGGGTGAGTTCTT	NA	False	NA	-17	True	AATAAA	-13	NA	126861935	126755738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126861604
ES.24362.47	chr4	-	3749	25	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.7931343129267	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGATGGGTGAGTTCT	NA	False	NA	-18	True	AATAAA	-12	NA	126808985	126755739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126755866_126757869_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864
ES.24362.48	chr4	-	6596	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	172	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_27	81.1291879061753	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGATGGGTGAGTTCT	NA	False	NA	-18	True	AATAAA	-12	NA	126861520	126755739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861431
ES.24362.49	chr4	-	6889	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-20	-230	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTGAGTGTAGCTGT	NA	False	NA	NA	False	GGGGCT	-44	NA	126861948	126755961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.5	chr4	-	7281	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-69	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	89.0620566826691	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGGTTTTTATTCAC	NA	False	NA	NA	False	AAAAAG	-19	NA	126861997	126755611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126826969_126827114_126842226_126842273_126861608
ES.24362.50	chr4	-	6842	31	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-55	-459	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	79.1789043173047	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTTCTGATTTGTGTG	NA	False	NA	9	True	AATAAA	-31	NA	126861983	126756190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126826969_126827114_126842226_126842273_126861608
ES.24362.51	chr4	-	6727	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-92	-464	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTATCAGTTCTGATTT	NA	False	NA	4	True	AATAAA	-26	NA	126862020	126756195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.53	chr4	-	6543	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	39	-468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	75.7210157236564	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCTGTATCAGTTCTG	NA	False	NA	0	True	AATAAA	-22	NA	126861653	126756199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126825235_126825423_126842226_126842273_126861608
ES.24362.58	chr4	-	6571	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	-470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.7923097222974	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGCTGTATCAGTTC	NA	False	NA	-2	True	AATAAA	-20	NA	126862021	126756201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.59	chr4	-	6635	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	4	-472	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_29	64.2608203503864	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCCTGCTGTATCAGT	NA	False	NA	-4	True	AATAAA	-18	NA	126861924	126756203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.60	chr4	-	6669	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-88	-472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	61.9432240862879	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCCTGCTGTATCAGT	NA	False	NA	-4	True	AATAAA	-18	NA	126862016	126756203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126861608
ES.24362.61	chr4	-	5082	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-51	-473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.146866548105	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATCCTGCTGTATCAG	NA	False	NA	-5	True	AATAAA	-17	NA	126861979	126756204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126756275_126757869_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.62	chr4	-	6441	28	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-80	-474	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	65.0008124883271	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCATCCTGCTGTATCA	NA	False	NA	-6	True	AATAAA	-16	NA	126862008	126756205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.63	chr4	-	4871	21	NNC	ENSMUSG00000042446.17	novel	5799	24	NA	NA	4	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.2788054971294	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCATCCTGCTGTATCA	NA	False	NA	-6	True	AATAAA	-16	NA	126809019	126756205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864
ES.24362.65	chr4	-	5866	27	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	4	-474	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	61.7453253866282	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCATCCTGCTGTATCA	NA	False	NA	-6	True	AATAAA	-16	NA	126861924	126756205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126842226_126842273_126861608
ES.24362.68	chr4	-	6642	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-56	-475	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	87.5398057919796	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCATCCTGCTGTATC	NA	False	NA	-7	True	AATAAA	-15	NA	126861984	126756206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126811545_126811659_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.71	chr4	-	8341	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-80	-476	intron_retention	FALSE	non_canonical	0	0	junction_24	77.0696334172009	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCATCCTGCTGTAT	NA	False	NA	-8	True	AATAAA	-14	NA	126862008	126756207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817033_126817374_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.73	chr4	-	6393	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	11	-477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	79.4509248839981	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTCATCCTGCTGTA	NA	False	NA	-9	True	AATAAA	-13	NA	126861705	126756208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800322_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809456_126816853_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.75	chr4	-	6471	31	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	204	-478	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	86.2986094905358	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTCATCCTGCTGT	NA	False	NA	-10	True	AATAAA	-12	NA	126861488	126756209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126811545_126811659_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861431
ES.24362.76	chr4	-	6666	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-26	-478	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	65.1517573540868	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTCATCCTGCTGT	NA	False	NA	-10	True	AATAAA	-12	NA	126861954	126756209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819833_126842226_126842273_126861608
ES.24362.77	chr4	-	5788	26	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-74	-479	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	79.9227226763453	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGTGTCATCCTGCTG	NA	False	NA	-11	True	AATAAA	-11	NA	126862002	126756210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126842226_126842273_126861608
ES.24362.80	chr4	-	8898	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-56	-483	intron_retention	FALSE	canonical	3	165	junction_14	35.7498394459075	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCAGGTGTCATCCT	NA	False	NA	-15	True	AATAAA	-7	NA	126861984	126756214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.81	chr4	-	6608	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-10	-483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	60.8676269807582	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCAGGTGTCATCCT	NA	False	NA	-15	True	AATAAA	-7	NA	126861938	126756214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819799_126842226_126842273_126861608
ES.24362.82	chr4	-	6383	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-1	-483	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	65.6052222334808	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCAGGTGTCATCCT	NA	False	NA	-15	True	AATAAA	-7	NA	126861717	126756214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793748_126794407_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.83	chr4	-	6772	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	-483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	61.1143253337449	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCAGGTGTCATCCT	NA	False	NA	-15	True	AATAAA	-7	NA	126862019	126756214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126784034_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.84	chr4	-	6598	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.8284267672003	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTGTGCTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	126862019	126756320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776101_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.86	chr4	-	6489	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	-703	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTTTGACGTTGTGTA	NA	False	NA	-3	True	AATAAA	-30	NA	126862021	126756434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.87	chr4	-	5436	27	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-8	-707	combination_of_known_splicesites	FALSE	canonical	1	4	junction_25	66.5792227305808	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGGCCTTTGACGTTG	NA	False	NA	-7	True	AATAAA	-26	NA	126861724	126756438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126842226_126842273_126861608
ES.24362.88	chr4	-	6308	29	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-88	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	60.550577610619	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGGGCCTTTGACGTT	NA	False	NA	-8	True	AATAAA	-25	NA	126862016	126756439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.89	chr4	-	6173	27	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-91	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	79.3335498397589	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGGGCCTTTGACGTT	NA	False	NA	-8	True	AATAAA	-25	NA	126862019	126756439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126861604
ES.24362.9	chr4	-	6970	27	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-68	116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	79.3335498397589	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCCTTGGTTTTTAT	NA	False	NA	NA	False	AAAAAG	-15	NA	126861996	126755615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126861608
ES.24362.91	chr4	-	5779	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-80	1403	-80	-1403	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGCTGTCTCCTGGCC	NA	False	NA	NA	False	ACTAAA	-16	NA	126862008	126757134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.92	chr4	-	5221	28	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-72	-1683	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_19	60.0295080617394	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126862000	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.93	chr4	-	5510	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-91	1683	-91	-1683	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126862019	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.94	chr4	-	5495	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-67	-1683	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_29	64.2608203503864	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861995	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861599
ES.24362.96	chr4	-	5484	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-49	-1683	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	65.1517573540868	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861977	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819833_126842226_126842273_126861608
ES.24362.98	chr4	-	5115	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	49	-1683	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	61.105608275047	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861643	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809113_126809381_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ES.24362.99	chr4	-	4445	27	NIC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	7	-1683	combination_of_known_splicesites	FALSE	canonical	1	4	junction_25	66.5792227305808	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGTCTGGATTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	126861709	126757414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126842226_126842273_126861608
ES.24363.1	chr4	+	303	1	Intergenic	novelGene_20003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGGTGTGTTCCAAGT	NA	False	NA	NA	False	NA	NA	NA	126877811	126878114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126877800_126878100
ES.24363.2	chr4	+	467	1	Intergenic	novelGene_20004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	126877836	126878303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126877800_126878300
ES.24364.1	chr4	+	177	1	Intergenic	novelGene_20005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAATAAATACA	NA	False	NA	NA	False	NA	NA	NA	126882850	126883027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126882800_126883000
ES.24365.1	chr4	+	157	1	Intergenic	novelGene_20009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126891162	126891319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126891200_126891300
ES.24366.1	chr4	-	3474	3	Intergenic	novelGene_20006	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTGTGTCTGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	126893222	126885920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126888823_126891972_126892463_126893140
ES.24366.2	chr4	-	156	1	Intergenic	novelGene_20007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	126886967	126886811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126886800_126887000
ES.24366.3	chr4	-	2434	2	Intergenic	novelGene_20008	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCGGCTGTATTAGTTAT	NA	False	NA	NA	False	NA	NA	NA	126893220	126890108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126892463_126893140
ES.24367.1	chr4	+	384	1	Intergenic	novelGene_20010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAACAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	126895351	126895735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126895400_126895700
ES.24368.1	chr4	-	1120	3	Intergenic	novelGene_20011	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGCTGAAGTCCAGCA	NA	False	NA	NA	False	NA	NA	NA	126899906	126898595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126899358_126899439_126899501_126899609
ES.24369.1	chr4	+	176	1	Intergenic	novelGene_20012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	126912754	126912930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126912800_126912900
ES.2437.1	chr10	-	176	1	Intergenic	novelGene_1858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCACATTTATGT	NA	False	NA	NA	False	NA	NA	NA	20964784	20964608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_20964600_20964800
ES.24370.1	chr4	+	3080	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-50	435	-50	-435	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTATTACTTCAAGTG	NA	False	NA	22	True	ATTAAA	-22	NA	126915066	126924594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.10	chr4	+	2265	11	NNC	ENSMUSG00000028820.14	novel	3465	10	NA	NA	-2	-958	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	285.68914925142	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATACTGATCTTCAACTT	NA	False	NA	7	True	AATAAA	-15	NA	126915114	126924071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126915533_126915776_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.11	chr4	+	4660	10	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	3465	10	NA	NA	-2	-5	multi-exon	FALSE	canonical	0	0	junction_1	406.93106159261	998	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTCTTTGTTCAAG	NA	False	NA	13	True	AATAAA	-14	NA	126915114	126930801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126916014_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619_126926599_126929600_126929648_126930355_126930443_126930724
ES.24370.12	chr4	+	11103	10	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	3465	10	NA	NA	-1	1	intron_retention	FALSE	canonical	3	313	junction_9	234.957416682941	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTCAAGTAGGAC	NA	False	NA	19	True	AATAAA	-20	NA	126915115	126930807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920680_126921060_126921110_126921189_126929648_126930355_126930443_126930724
ES.24370.13	chr4	+	5250	13	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	3465	10	NA	NA	-1	-1	multi-exon	FALSE	canonical	3	45	junction_10	302.369071757605	998	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTTCAAGTAGG	NA	False	NA	17	True	AATAAA	-18	NA	126915115	126930805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619_126926599_126929600_126929648_126930355_126930443_126930724
ES.24370.14	chr4	+	11802	9	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	3465	10	NA	NA	1	-6	intron_retention	FALSE	canonical	3	313	junction_8	204.157873960325	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126915117	126930800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920680_126921060_126921110_126921189_126930443_126930724
ES.24370.15	chr4	+	4355	9	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	1	1417	1	-1417	5prime_fragment	FALSE	canonical	3	697	junction_1	107.230403221288	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATAGCGTACTGAGCGCT	NA	False	NA	NA	False	AATGAA	-16	NA	126915117	126923612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189
ES.24370.16	chr4	+	2872	10	NNC	ENSMUSG00000028820.14	novel	3465	10	NA	NA	1	-442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.875553618821	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCATGTATTACT	NA	False	NA	15	True	ATTAAA	-15	NA	126915117	126924587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126916014_126916608_126916798_126917209_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.17	chr4	+	2015	13	NNC	ENSMUSG00000028820.14	novel	925	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.511335134302	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126915118	126930800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126915525_126915772_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ES.24370.18	chr4	+	4501	9	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	2	1270	2	-1270	intron_retention	FALSE	canonical	3	697	junction_1	107.230403221288	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGGCTTTCATTCTAGT	NA	False	NA	7	True	AATAAA	-18	NA	126915118	126923759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189
ES.24370.19	chr4	+	2202	12	NNC	ENSMUSG00000028820.14	novel	925	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	347.266849069717	998	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126915118	126930800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126916014_126916608_126916737_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ES.24370.2	chr4	+	2556	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-36	945	-36	-945	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTTGCTATTCATGCT	NA	False	NA	20	True	AATAAA	-28	NA	126915080	126924084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.21	chr4	+	2746	11	NNC	ENSMUSG00000028820.14	novel	3465	10	NA	NA	33	-442	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	285.68914925142	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCATGTATTACT	NA	False	NA	15	True	ATTAAA	-15	NA	126915149	126924587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126915533_126915776_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.22	chr4	+	1571	9	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	3465	10	NA	NA	107	-6	multi-exon	FALSE	canonical	0	0	junction_1	390.747920659855	998	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126915223	126930800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126916014_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ES.24370.23	chr4	+	2885	9	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	1493	-318	-566	318	3prime_fragment	FALSE	canonical	3	746	junction_1	113.608978518425	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATGACTGACAGGT	NA	False	NA	NA	False	AGTAAA	-34	NA	126916609	126925347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.24	chr4	+	3021	3	FSM	ENSMUSG00000028820.14	ENSMUST00000125453.2	644	3	331	-2708	331	-979	multi-exon	FALSE	canonical	3	958	junction_1	46	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAGAAAAAATAGT	NA	False	NA	-14	True	NA	NA	NA	126920568	126924050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126920680_126921060_126921110_126921189
ES.24370.25	chr4	+	1092	2	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	6071	442	950	-442	3prime_fragment	FALSE	canonical	3	1068	junction_1	0	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTCATGTATTACT	NA	False	NA	15	True	ATTAAA	-15	NA	126921187	126924587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126921312_126923619
ES.24370.26	chr4	+	6267	4	NIC	ENSMUSG00000085334.8	novel	574	3	NA	NA	-6282	0	intron_retention	FALSE	canonical	3	313	junction_3	348.612806547449	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126921241	126930806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126921312_126923619_126929648_126930355_126930443_126930724
ES.24370.27	chr4	+	4272	4	Fusion	ENSMUSG00000085334.8_ENSMUSG00000028820.14	novel	574	3	NA	NA	2300	-5	multi-exon	FALSE	canonical	3	45	junction_1	134.514765814844	995	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTCTTTGTTCAAG	NA	False	NA	13	True	AATAAA	-14	NA	126922537	126930801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126926599_126929600_126929648_126930355_126930443_126930724
ES.24370.28	chr4	+	2592	1	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	7970	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTGTCTTTGTTCA	NA	False	NA	11	True	AATAAA	-12	NA	126928207	126930799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126928200_126930800
ES.24370.29	chr4	+	1502	2	FSM	ENSMUSG00000085334.8	ENSMUST00000137457.2	462	2	-984	-56	-652	-6	multi-exon	FALSE	canonical	3	345	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGTCTTTGTTCAA	NA	False	NA	12	True	AATAAA	-13	NA	126928590	126930800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126929648_126930355
ES.24370.3	chr4	+	2217	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-4	1252	-4	-1252	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTGTCTTTTCTT	NA	False	NA	25	True	AATAAA	-36	NA	126915112	126923777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.30	chr4	+	158	1	Intergenic	novelGene_20013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	126929722	126929880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126929700_126929900
ES.24370.4	chr4	+	2269	12	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	77	junction_9	288.88503246702	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTCTTTGTTCAAG	NA	False	NA	13	True	AATAAA	-14	NA	126915113	126930801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ES.24370.5	chr4	+	2717	11	NNC	ENSMUSG00000028820.14	novel	3465	10	NA	NA	-2	-444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	285.68914925142	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCTTTTCATGTATTA	NA	False	NA	13	True	ATTAAA	-13	NA	126915114	126924585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126915482_126915787_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24370.7	chr4	+	5335	9	ISM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-2	440	-2	-440	intron_retention	FALSE	canonical	3	697	junction_1	107.230403221288	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTCATGTATTACTTC	NA	False	NA	17	True	ATTAAA	-17	NA	126915114	126924589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189
ES.24370.8	chr4	+	3040	10	NNC	ENSMUSG00000028820.14	novel	3465	10	NA	NA	-2	-444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	294.732312111294	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCTTTTCATGTATTA	NA	False	NA	13	True	ATTAAA	-13	NA	126915114	126924585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920697_126921060_126921110_126921189_126921312_126923619
ES.24370.9	chr4	+	3530	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	-2	-63	-2	63	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGGCTCTGTTCTTAG	NA	False	NA	89	True	NA	NA	NA	126915114	126925092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ES.24371.1	chr4	+	4374	1	Antisense	novelGene_ENSMUSG00000043872.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGGTGTTAAGACC	NA	False	NA	NA	False	NA	NA	NA	126945193	126949567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_126945200_126949600
ES.24372.1	chr4	+	293	1	Intergenic	novelGene_20016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGGCAGCCACCGCC	NA	False	NA	NA	False	NA	NA	NA	126954079	126954372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126954100_126954400
ES.24372.2	chr4	+	167	1	Intergenic	novelGene_20017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAAAGTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	126954080	126954247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126954100_126954200
ES.24373.1	chr4	-	3573	3	Antisense	novelGene_ENSMUSG00000085334.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAACTTTATGCAGGG	NA	False	NA	NA	False	NA	NA	NA	126933999	126929436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126929646_126930353_126930441_126930722
ES.24373.10	chr4	-	7171	6	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	-7	8318	intron_retention	FALSE	canonical	3	6	junction_1	170.953326963824	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTCTAAATCTCTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	126954886	126932568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126933872_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126953453_126954788
ES.24373.11	chr4	-	3156	1	Intergenic	novelGene_20014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTTAGCTGTTTTAT	NA	False	NA	-4	True	NA	NA	NA	126936340	126933184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126933200_126936300
ES.24373.12	chr4	-	3495	2	Antisense	novelGene_ENSMUSG00000085334.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTTTAGCTGTTTT	NA	False	NA	-6	True	NA	NA	NA	126936841	126933186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126936269_126936428
ES.24373.13	chr4	-	1709	8	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	14	7699	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	145.548084487427	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCTTTTAGCTGTTT	NA	False	NA	-7	True	NA	NA	NA	126954931	126933187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126933872_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.14	chr4	-	1098	5	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-6	7698	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	206.723244943572	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGCTTTTAGCTGTT	NA	False	NA	-8	True	NA	NA	NA	126954885	126933188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126933872_126944356_126944395_126944536_126944666_126945067_126945219_126954788
ES.24373.15	chr4	-	209	1	Intergenic	novelGene_20015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATCCTTTTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	126934819	126934610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126934600_126934800
ES.24373.16	chr4	-	3779	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	42	31	14	-31	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTGGGAAGAGAATAGT	NA	False	NA	NA	False	AATAAA	-17	NA	126954903	126940917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.17	chr4	-	4425	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	18	-38	intron_retention	FALSE	canonical	3	376	junction_5	28.9333525345558	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCATTGCTGGGAAGA	NA	False	NA	NA	False	AATAAA	-10	NA	126954899	126940924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.18	chr4	-	3388	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	-21	485	-21	14	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGTTGGAGGTTC	NA	False	NA	NA	False	ATTAAA	-34	NA	126954966	126941371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.19	chr4	-	3214	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	1	12	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	141.739981029427	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGTTTGTTGGAGGT	NA	False	NA	NA	False	ATTAAA	-32	NA	126954944	126941373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
ES.24373.2	chr4	-	861	1	Antisense	novelGene_ENSMUSG00000085334.8_AS_novelGene_ENSMUSG00000028820.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAACTTTATGCAGGG	NA	False	NA	NA	False	NA	NA	NA	126930297	126929436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126929400_126930300
ES.24373.20	chr4	-	3235	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-1	10	combination_of_known_splicesites	FALSE	canonical	2	18	junction_2	149.812568082773	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954946	126941375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.21	chr4	-	4049	7	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	14	10	intron_retention	FALSE	canonical	3	14	junction_4	196.752594222626	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954931	126941375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126954788
ES.24373.22	chr4	-	3553	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	3	10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTTTGTTTGTTGGAG	NA	False	NA	NA	False	ATTAAA	-30	NA	126954942	126941375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.23	chr4	-	2971	6	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	1	8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	165.85704688074	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954944	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126954788
ES.24373.24	chr4	-	4022	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-4	8	intron_retention	FALSE	canonical	3	376	junction_5	28.9333525345558	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954949	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.25	chr4	-	4702	5	ISM	ENSMUSG00000043872.15	ENSMUST00000055013.10	3001	6	2717	-8	1304	8	3prime_fragment	FALSE	canonical	3	404	junction_3	10.3198837202751	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126950062	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000
ES.24373.26	chr4	-	3491	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-13	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	178.434862064564	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954930	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126947768_126947914_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.27	chr4	-	4694	8	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-7	8	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	143.635309171583	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954886	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126952825_126953302_126953453_126954788
ES.24373.28	chr4	-	3013	7	NNC	ENSMUSG00000043872.15	novel	2982	8	NA	NA	14	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	197.291451073448	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954931	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943406_126944536_126944666_126945067_126945219_126948000_126948174_126952585_126952825_126953302_126953453_126954788
ES.24373.29	chr4	-	3605	6	NNC	ENSMUSG00000043872.15	novel	3001	6	NA	NA	882	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.055200457813	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126950484	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126949694
ES.24373.3	chr4	-	5065	8	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	19	10117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.612288631747	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTTCGTCTTGACTC	NA	False	NA	NA	False	AATAAA	-24	NA	126954898	126930769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126934739_126944252_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.30	chr4	-	3497	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-10	8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	177.349892514769	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAAGTTTTGTTTGTTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	126954927	126941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126947768_126947923_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.31	chr4	-	3168	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-11	7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	157.153233784383	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAAGTTTTGTTTGTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	126954928	126941378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126952585_126952825_126953302_126953453_126954788
ES.24373.32	chr4	-	3076	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	-39	-55	-11	6	multi-exon	FALSE	canonical	3	10	junction_1	144.172515708488	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGAAGTTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	126954956	126941379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.33	chr4	-	3427	8	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	2	13	junction_7	138.51633661848	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGAAGTTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	126954929	126941380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954703
ES.24373.34	chr4	-	3337	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	203.311663839194	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	126954924	126941381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126945067_126945219_126948000_126948176_126951193_126951324_126952585_126952825_126953302_126953453_126954788
ES.24373.35	chr4	-	3849	6	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-13	4	intron_retention	FALSE	canonical	3	33	junction_5	152.235869623424	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	126954930	126941381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126954788
ES.24373.36	chr4	-	3394	9	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	177.349892514769	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATGAAGTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	126954928	126941381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126947768_126947823_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.37	chr4	-	3087	8	NIC	ENSMUSG00000043872.15	novel	2982	8	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	178.479976582294	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954886	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954703
ES.24373.39	chr4	-	4679	7	ISM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	12	497	12	2	intron_retention	FALSE	canonical	3	376	junction_6	18.4157239577729	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954933	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302
ES.24373.4	chr4	-	3853	9	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	23	10117	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	180.087088307296	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTTCGTCTTGACTC	NA	False	NA	NA	False	AATAAA	-24	NA	126954830	126930769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126932690_126932862_126933872_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.41	chr4	-	3147	7	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	193.50165086864	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954933	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126954788
ES.24373.42	chr4	-	3294	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.612288631747	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954895	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943689_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.43	chr4	-	3069	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	19	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	159.799527186062	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126954898	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126953302_126953453_126954788
ES.24373.44	chr4	-	6377	3	NIC	ENSMUSG00000043872.15	novel	1878	7	NA	NA	3062	2	intron_retention	FALSE	canonical	3	404	junction_2	13.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126948304	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067
ES.24373.45	chr4	-	3717	4	ISM	ENSMUSG00000043872.15	ENSMUST00000055013.10	3001	6	6478	-2	5065	2	3prime_fragment	FALSE	canonical	3	404	junction_3	11.4406682011537	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAATGAAGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	126946301	126941383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067
ES.24373.46	chr4	-	3396	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	198.228892640682	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126954924	126941385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.47	chr4	-	2950	7	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	153.992875015552	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCCTAATGAAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	126954898	126941386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952620_126954788
ES.24373.48	chr4	-	3234	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	147.423034226026	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCCTAATGAAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	126954885	126941386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952767_126953302_126953453_126954788
ES.24373.49	chr4	-	3832	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	391	junction_5	23.5419247773461	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATCCTAATGAAGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	126954948	126941387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126953453_126954788
ES.24373.5	chr4	-	5060	8	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	-17	10113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.612288631747	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCCTCTTTCGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	126954962	126930773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126934704_126944282_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.50	chr4	-	3282	8	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	147.423034226026	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAATCCTAATGAAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	126954885	126941388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952817_126953302_126953453_126954788
ES.24373.51	chr4	-	4484	6	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	391	junction_4	25.350345165303	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAATCCTAATGAAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	126954944	126941388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126953453_126954788
ES.24373.53	chr4	-	3555	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	175.651465977372	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTAGAATCCTAATGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	126954929	126941391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951162_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.54	chr4	-	3580	10	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-10	-53	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	201.274335235994	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGGGGGGAATTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	126954927	126941487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126947768_126947923_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.55	chr4	-	3235	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	15	602	-13	-54	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTGGGGGGAATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	126954930	126941488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.56	chr4	-	3847	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-7	-55	intron_retention	FALSE	canonical	3	376	junction_5	28.9333525345558	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACTGGGGGGAATTG	NA	False	NA	NA	False	AATAAA	-12	NA	126954886	126941489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.57	chr4	-	3014	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	64	774	-2	-226	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGCATATTGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	126954881	126941660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.58	chr4	-	2587	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	122	1143	30	428	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTGGCAACTCAGAGC	NA	False	NA	NA	False	AAAAAG	-22	NA	126954823	126942029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.59	chr4	-	2482	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	175.651465977372	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACACACGTCACAGTC	NA	False	NA	NA	False	AATAAA	-7	NA	126954928	126942463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951162_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.6	chr4	-	3519	10	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	6	10113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.851646704103	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCCTCTTTCGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	126954873	126930773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126931031_126940243_126940349_126941509_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24373.60	chr4	-	1682	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	-12	-738	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCATTGAGAACATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	126954891	126943195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
ES.24373.7	chr4	-	4534	2	Antisense	novelGene_ENSMUSG00000085334.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCATTCCTCTTTCGTC	NA	False	NA	NA	False	AATAAA	-17	NA	126935483	126930776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126932690_126932862
ES.24373.8	chr4	-	2414	2	Antisense	novelGene_ENSMUSG00000085334.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCCATCTTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	126934007	126931420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126932690_126932862
ES.24373.9	chr4	-	2152	9	NNC	ENSMUSG00000043872.15	novel	621	4	NA	NA	-10	8319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.087088307296	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTCTAAATCTCTAATC	NA	False	NA	NA	False	AATAAA	-14	NA	126954927	126932567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_126932690_126932862_126933872_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ES.24374.1	chr4	+	2418	4	NNC	ENSMUSG00000042408.14	novel	404	3	NA	NA	-14895	1907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5933826558939	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGTAACTGTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	126956280	126984252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126956362_126972200_126972340_126980767_126980835_126982121
ES.24374.10	chr4	+	5272	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-8	-9	intron_retention	FALSE	canonical	1	1	junction_4	29.0703755513044	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAAATGTAGCCTTTA	2736	False	NA	8	True	NA	NA	NA	126971167	127018154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126984699_126984956_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.11	chr4	+	3060	3	FSM	ENSMUSG00000042408.14	ENSMUST00000129926.2	404	3	-915	-1741	-7	1598	multi-exon	FALSE	canonical	3	75	junction_1	0.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGAAGCT	2737	False	NA	NA	False	NA	NA	NA	126971168	126983943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126972340_126980767_126980835_126982121
ES.24374.12	chr4	+	4033	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-7	-76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.4758706756993	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGTACAGGGATTT	2737	False	NA	-59	True	ATTAAA	-16	NA	126971168	127018087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000409_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.13	chr4	+	4765	13	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-7	-108	intron_retention	FALSE	canonical	0	0	junction_4	24.118198523107	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCAGTGATTAAATGT	2737	False	NA	29	True	AATACA	-18	NA	126971168	127018055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.14	chr4	+	4357	17	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-7	5272	intron_retention	FALSE	canonical	1	1	junction_16	31.1983948906029	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	2737	False	NA	7	True	TTTAAA	-4	NA	126971168	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127022646
ES.24374.15	chr4	+	5194	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-6	1	intron_retention	FALSE	canonical	3	10	junction_2	25.7004923322968	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATGTTGGTGATTG	2738	False	NA	20	True	NA	NA	NA	126971169	127018166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.16	chr4	+	4941	13	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_1	24.1315837303177	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTAGCCTTTATGTTG	2741	False	NA	13	True	NA	NA	NA	126971172	127018159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126982129_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.17	chr4	+	4980	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-3	-78	intron_retention	FALSE	non_canonical	0	0	junction_2	30.4735795937143	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTGTTGTACAGGGAT	2741	False	NA	59	True	ATTAAA	-14	NA	126971172	127018085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126984691_126984956_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.18	chr4	+	4909	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-2	-8	intron_retention	FALSE	canonical	0	0	junction_9	23.15882900638	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAATGTAGCCTTTAT	2742	False	NA	9	True	NA	NA	NA	126971173	127018155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000470_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.19	chr4	+	3436	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-2	-1272	intron_retention	FALSE	canonical	0	0	junction_14	22.3429895867467	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCTCTGAATTGGAAC	2742	False	NA	NA	False	NA	NA	NA	126971173	127016891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127016649
ES.24374.2	chr4	+	168	1	Intergenic	novelGene_20018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTAGCCATTCT	NA	False	NA	NA	False	NA	NA	NA	126959863	126960031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126959900_126960000
ES.24374.20	chr4	+	5079	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-1	-107	intron_retention	FALSE	canonical	3	10	junction_2	25.7004923322968	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAGTGATTAAATGTT	2743	False	NA	30	True	AATACA	-19	NA	126971174	127018056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.21	chr4	+	4119	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.6244815978484	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGGAGAAAATGTAGCCT	2748	False	NA	5	True	NA	NA	NA	126971179	127018151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971394_126972200_126972340_126982129_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.22	chr4	+	4199	15	FSM	ENSMUSG00000042408.14	ENSMUST00000046751.13	4210	15	13	-2	-1	0	multi-exon	FALSE	canonical	2	12	junction_1	19.4952898550038	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTTATGTTGGTGATT	2757	False	NA	19	True	NA	NA	NA	126971188	127018165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.23	chr4	+	4957	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-1	1	intron_retention	FALSE	non_canonical	0	0	junction_3	32.6929411703331	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATGTTGGTGATTG	2757	False	NA	20	True	NA	NA	NA	126971188	127018166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126986696_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.24	chr4	+	4355	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	28.9085915718263	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAAATGTAGCCTTTA	2758	False	NA	8	True	NA	NA	NA	126971189	127018154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971394_126972200_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.25	chr4	+	4296	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	3	5273	intron_retention	FALSE	canonical	1	1	junction_11	35.161848011098	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTACTTCGTCCACTT	2761	False	NA	8	True	TTTAAA	-5	NA	126971192	127023438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127022646
ES.24374.26	chr4	+	5424	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_5	34.3941855551196	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCCTTTATGTTGGTGA	2761	False	NA	17	True	NA	NA	NA	126971192	127018163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126984699_126984956_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.27	chr4	+	4811	13	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	4	-113	intron_retention	FALSE	canonical	0	0	junction_1	24.1315837303177	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTATTTTCAGTGATTA	2762	False	NA	24	True	AATACA	-13	NA	126971193	127018050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126982129_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.29	chr4	+	3867	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	14	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	26.7104640335747	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACACAAGGGAGAAAAT	2772	False	NA	-2	True	NA	NA	NA	126971203	127018144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127016634
ES.24374.3	chr4	+	3642	1	Intergenic	novelGene_20019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAACCTCATCAATC	NA	False	NA	NA	False	NA	NA	NA	126965918	126969560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126965900_126969600
ES.24374.30	chr4	+	4503	18	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	16	5274	intron_retention	FALSE	canonical	0	0	junction_16	31.2990929260431	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTACTTCGTCCACTTC	2774	False	NA	9	True	TTTAAA	-6	NA	126971205	127023439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127021611_127021793_127022646
ES.24374.32	chr4	+	3753	5	NNC	ENSMUSG00000042408.14	novel	3922	14	NA	NA	21	6522	intron_retention	FALSE	canonical	3	10	junction_2	30.6186217847897	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATAAAAATAAAGGAA	2779	False	NA	NA	False	NA	NA	NA	126971210	126988867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126986704
ES.24374.33	chr4	+	4794	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	21	4	intron_retention	FALSE	non_canonical	0	0	junction_1	35.5795633115949	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGTTGGTGATTGTTC	2779	False	NA	23	True	NA	NA	NA	126971210	127018169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126982129_126982348_126986704_126986877_126994225_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127016634
ES.24374.34	chr4	+	4893	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	21	-63	intron_retention	FALSE	non_canonical	0	0	junction_3	34.4792898501612	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTTAAGAATTGTGGAA	2779	False	NA	-46	True	ATTAAA	-29	NA	126971210	127018100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126982917_126982952_126986766_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000366_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.35	chr4	+	4672	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	22	-13	intron_retention	FALSE	canonical	0	0	junction_14	22.3429895867467	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGGGAGAAAATGTAGCC	2780	False	NA	4	True	NA	NA	NA	126971211	127018150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127016634
ES.24374.36	chr4	+	3256	4	NNC	ENSMUSG00000042408.14	novel	404	3	NA	NA	-20	6522	intron_retention	FALSE	non_canonical	0	0	junction_3	35.5933826558939	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGATAAAAATAAAGGAA	2783	False	NA	NA	False	NA	NA	NA	126971214	126988867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126983553_126988234
ES.24374.38	chr4	+	4862	12	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-17	-15	intron_retention	FALSE	canonical	0	0	junction_10	36.8562093179597	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAGGGAGAAAATGTAG	2786	False	NA	2	True	NA	NA	NA	126971217	127018148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126984699_126984956_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127014220_127014366_127016141
ES.24374.39	chr4	+	4939	14	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-17	-13	intron_retention	FALSE	canonical	1	1	junction_7	22.9228187904929	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGGGAGAAAATGTAGCC	2786	False	NA	4	True	NA	NA	NA	126971217	127018150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998086_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.4	chr4	+	5336	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-290	27	intron_retention	TRUE	canonical	3	69	junction_3	8.41103811251486	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTCAAGAGGAAATGTC	2454	False	NA	46	True	NA	NA	NA	126970885	127018192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.40	chr4	+	4802	13	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_8	22.9787039089095	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCCTTTATGTTGGTGA	2786	False	NA	17	True	NA	NA	NA	126971217	127018163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.41	chr4	+	3902	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-16	-776	intron_retention	FALSE	canonical	0	0	junction_14	22.3429895867467	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGACTACTTTTTTCA	2787	False	NA	NA	False	NA	NA	NA	126971218	127017387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127016634
ES.24374.42	chr4	+	4056	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	1	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.3429895867467	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTACAGGGATTTA	2804	False	NA	-58	True	ATTAAA	-17	NA	126971235	127018088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971375_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.43	chr4	+	1880	11	ISM	ENSMUSG00000042408.14	ENSMUST00000046751.13	4210	15	61	17543	2	-695	5prime_fragment	FALSE	canonical	2	12	junction_1	21.2275764042907	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTCCTCAAAGTTTTC	2805	False	NA	NA	False	AATAAA	-24	NA	126971236	127000620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368
ES.24374.44	chr4	+	4990	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	2	-77	intron_retention	FALSE	canonical	0	0	junction_1	29.5476094547392	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTTGTACAGGGATT	2805	False	NA	60	True	ATTAAA	-15	NA	126971236	127018086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126973049_126973161_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.45	chr4	+	4416	18	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	2	5272	intron_retention	FALSE	canonical	0	0	junction_14	31.7913831332091	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	2805	False	NA	7	True	TTTAAA	-4	NA	126971236	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018155_127018274_127018375_127018571_127021611_127021793_127022646
ES.24374.46	chr4	+	4247	17	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	7	5272	intron_retention	FALSE	non_canonical	0	0	junction_2	36.1087225438674	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	2810	False	NA	7	True	TTTAAA	-4	NA	126971241	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126986696_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127021611_127021793_127022646
ES.24374.47	chr4	+	3820	18	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-210	5272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	34.8845847912135	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	3442	False	NA	7	True	TTTAAA	-4	NA	126971873	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126972487_126972656_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127022646
ES.24374.48	chr4	+	7299	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	76	5027	intron_retention	FALSE	canonical	3	4	junction_14	21.3862677664802	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCAATGTTCATGGCT	3728	False	NA	NA	False	NA	NA	NA	126972159	127023192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101
ES.24374.49	chr4	+	3855	13	Fusion	ENSMUSG00000070737.11_ENSMUSG00000042408.14	novel	2637	2	NA	NA	425	-107	multi-exon	FALSE	canonical	1	1	junction_11	29.3636207273937	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAGTGATTAAATGTT	4077	False	NA	30	True	AATACA	-19	NA	126972508	127018056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_126972656_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127014220_127014366_127016141
ES.24374.5	chr4	+	4998	13	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-274	-75	intron_retention	FALSE	non_canonical	0	0	junction_2	24.0641503763032	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTACAGGGATTTA	2470	False	NA	-58	True	ATTAAA	-17	NA	126970901	127018088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126986696_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.50	chr4	+	211	1	Intergenic	novelGene_20022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	506	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAGAAATACTATAAGAAT	NA	False	NA	NA	False	NA	NA	NA	126993288	126993499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_126993300_126993500
ES.24374.51	chr4	+	4373	13	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-3409	5272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.7998983738263	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	126994417	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127018020_127018101_127018274_127021611_127021793_127022646
ES.24374.52	chr4	+	2574	6	NNC	ENSMUSG00000042408.14	novel	3922	14	NA	NA	1277	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.1419976666097	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTGTACAGGGATTTA	NA	False	NA	-58	True	ATTAAA	-17	NA	126999103	127018088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126999240_127000376_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.53	chr4	+	4007	4	ISM	ENSMUSG00000042408.14	ENSMUST00000094713.4	3922	14	29520	-1	2883	1	3prime_fragment	FALSE	canonical	3	79	junction_1	7.34846922834953	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATGTTGGTGATTG	NA	False	NA	20	True	NA	NA	NA	127000709	127018166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.54	chr4	+	1982	1	Intergenic	novelGene_20023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127008454	127010436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127008500_127010400
ES.24374.55	chr4	+	2595	2	ISM	ENSMUSG00000042408.14	ENSMUST00000094713.4	3922	14	42523	82	15886	-80	3prime_fragment	FALSE	canonical	3	97	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTTGTTGTACAGGG	NA	False	NA	57	True	ATTAAA	-12	NA	127013712	127018083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127014366_127016141
ES.24374.56	chr4	+	3896	1	Genic_Genomic	ENSMUSG00000070737.11	novel	NA	NA	NA	NA	-295	2	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTACTTCGTCCACTTC	NA	False	NA	9	True	TTTAAA	-6	NA	127019543	127023439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_127019500_127023400
ES.24374.57	chr4	+	1136	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	-14	-2	-14	2	multi-exon	FALSE	canonical	3	98	junction_2	3.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTACTTCGTCCACTTC	NA	False	NA	9	True	TTTAAA	-6	NA	127019824	127023439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127019987_127021611_127021793_127022646
ES.24374.58	chr4	+	1031	3	NNC	ENSMUSG00000070737.11	novel	1120	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019834	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127019894_127021611_127021793_127022646
ES.24374.59	chr4	+	1967	2	ISM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	7	0	7	0	intron_retention	FALSE	canonical	3	105	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019845	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127019987_127021611
ES.24374.6	chr4	+	4415	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-21	1240	intron_retention	FALSE	canonical	2	4	junction_14	27.1088341484633	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTCTGTTTGCCAGT	2723	False	NA	NA	False	NA	NA	NA	126971154	127019405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375
ES.24374.60	chr4	+	781	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	21	318	21	-318	multi-exon	FALSE	canonical	3	98	junction_2	3.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAATGAGACAGTATA	NA	False	NA	NA	False	TATAAA	-16	NA	127019859	127023119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127019987_127021611_127021793_127022646
ES.24374.7	chr4	+	4124	15	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-18	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.3429895867467	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCAGTGATTAAATGT	2726	False	NA	29	True	AATACA	-18	NA	126971157	127018055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126971398_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24374.8	chr4	+	4144	16	NNC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-12	5272	intron_retention	FALSE	non_canonical	0	0	junction_2	36.0156755995065	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	2732	False	NA	7	True	TTTAAA	-4	NA	126971163	127023437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_126972340_126980767_126980835_126986696_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141_127016339_127018101_127018274_127018375_127018571_127022646
ES.24374.9	chr4	+	4919	14	NIC	ENSMUSG00000042408.14	novel	4210	15	NA	NA	-8	-106	intron_retention	FALSE	canonical	3	69	junction_3	8.41103811251486	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTGATTAAATGTTT	2736	False	NA	31	True	AATACA	-20	NA	126971167	127018057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ES.24375.1	chr4	+	210	1	Intergenic	novelGene_20025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTTTCTACAGATGT	424	False	NA	NA	False	NA	NA	NA	127030596	127030806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127030600_127030800
ES.24376.1	chr4	+	244	1	Intergenic	novelGene_20026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCTCTTCTGAGAAAG	5907	False	NA	NA	False	NA	NA	NA	127041580	127041824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127041600_127041800
ES.24377.1	chr4	+	3899	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-912	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.4106189336543	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127062084	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127062263_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.10	chr4	+	3859	12	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4106189336543	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127063013	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063159_127086874_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.11	chr4	+	6910	8	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	38	-7	intron_retention	FALSE	canonical	0	0	junction_2	80.6951936964915	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGAGCCAAATCTCTCC	NA	False	NA	10	True	AATAAA	-13	NA	127063034	127130808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063159_127086867_127086951_127088357_127093672_127094056_127094130_127108098_127108313_127128760_127128853_127129177_127129322_127129942
ES.24377.12	chr4	+	7775	11	NIC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	68	0	intron_retention	FALSE	canonical	3	99	junction_1	30.1801259109368	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	17	True	AATAAA	-20	NA	127063064	127130815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_127063159_127086867_127086951_127088354_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.13	chr4	+	3972	13	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	347	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	74.1147758547511	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAGCCAAATCTCTCCA	NA	False	NA	11	True	AATAAA	-14	NA	127063343	127130809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063552_127086867_127086951_127088354_127089507_127092169_127092218_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.14	chr4	+	4564	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	364	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.6541586062275	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAGCCAAATCTCTCCA	NA	False	NA	11	True	AATAAA	-14	NA	127063360	127130809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063552_127086867_127086951_127088354_127090164_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.15	chr4	+	3912	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	364	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	52.1746906757236	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127063360	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063552_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.16	chr4	+	3856	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	381	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	60.6781238235313	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGAGCCAAATCTCTCC	NA	False	NA	10	True	AATAAA	-13	NA	127063377	127130808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063552_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129210_127129322_127129942
ES.24377.17	chr4	+	3808	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	940	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.1626227984466	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGAGCCAAATCTCTCC	NA	False	NA	10	True	AATAAA	-13	NA	127063936	127130808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127064030_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.18	chr4	+	3795	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	1996	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.9150262212918	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127068668	127130810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127068747_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.19	chr4	+	4253	11	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	6083	-5	intron_retention	FALSE	canonical	0	0	junction_1	55.8946330160598	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	NA	False	NA	12	True	AATAAA	-15	NA	127072755	127130810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127073129_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.2	chr4	+	4797	12	FSM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	-907	-6	-907	6	multi-exon	FALSE	canonical	3	99	junction_1	32.2174943493246	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCAGAAGAGGCCACC	NA	False	NA	23	True	AATAAA	-26	NA	127062089	127130821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.20	chr4	+	3827	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	6344	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4106189336543	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGAGCCAAATCTCTCC	NA	False	NA	10	True	AATAAA	-13	NA	127073016	127130808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127073129_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.21	chr4	+	3852	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-1880	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4106189336543	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAGCCAAATCTCTCCAG	9108	False	NA	12	True	AATAAA	-15	NA	127086525	127130810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127086661_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.22	chr4	+	3789	11	ISM	ENSMUSG00000042388.15	ENSMUST00000106094.9	4207	12	20124	4	-1609	-4	3prime_fragment	FALSE	canonical	3	109	junction_1	28.2672955904876	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGCCAAATCTCTCCAGA	9379	False	NA	13	True	AATAAA	-16	NA	127086796	127130811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.23	chr4	+	5119	8	NIC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	2816	3	intron_retention	FALSE	canonical	3	155	junction_3	14.059639731791	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTCCAGAAGAGGCC	NA	False	NA	20	True	AATAAA	-23	NA	127091221	127130818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.24	chr4	+	2657	10	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-4082	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.8430339831607	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAGCCAAATCTCTCCA	NA	False	NA	11	True	AATAAA	-14	NA	127093016	127130809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127093193_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.25	chr4	+	2501	9	ISM	ENSMUSG00000042388.15	ENSMUST00000106092.2	2901	10	5011	-652	-3682	-2	3prime_fragment	FALSE	canonical	3	28	junction_7	49.2975658628294	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAATCTCTCCAGAAG	NA	False	NA	15	True	AATAAA	-18	NA	127093416	127130813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129210_127129322_127129942
ES.24377.26	chr4	+	609	3	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-3678	-13976	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	82.5	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGTAATCTTGGCACT	NA	False	NA	NA	False	NA	NA	NA	127093420	127094571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127093672_127094056_127094130_127094286
ES.24377.28	chr4	+	2306	9	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-3213	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.8446046804633	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAGCCAAATCTCTCCA	NA	False	NA	11	True	AATAAA	-14	NA	127093885	127130809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127093917_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.29	chr4	+	2306	9	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-3198	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.8446046804633	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127093900	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127093927_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.3	chr4	+	3780	12	NNC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	-658	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.4952095024908	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127062338	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127062365_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109057_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24377.30	chr4	+	3421	1	Intergenic	novelGene_20027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATGAATTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	127098292	127101713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127098300_127101700
ES.24377.31	chr4	+	1502	4	NIC	ENSMUSG00000042388.15	novel	2901	10	NA	NA	12039	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.7509535600773	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGAGCCAAATCTCTCCA	NA	False	NA	11	True	AATAAA	-14	NA	127109137	127130809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_127109177_127127327_127127813_127129210_127129322_127129942
ES.24377.32	chr4	+	4295	1	Intergenic	novelGene_20028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTACAGCGTATGCAGAAAA	4952	False	NA	NA	False	NA	NA	NA	127114762	127119057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127114800_127119100
ES.24377.4	chr4	+	2164	3	ISM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	-528	41070	-528	-18802	5prime_fragment	FALSE	canonical	3	99	junction_1	5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTGCTGACCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	127062468	127089745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_127063159_127086867_127086951_127088354
ES.24377.5	chr4	+	3916	12	NIC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	47.2956238256549	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127062930	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129210_127129322_127129942
ES.24377.7	chr4	+	4853	11	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-30	-9	intron_retention	FALSE	non_canonical	0	0	junction_3	55.6797988502114	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCGGAGCCAAATCTCT	NA	False	NA	8	True	AATAAA	-11	NA	127062966	127130806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063159_127086867_127086951_127088354_127089502_127093460_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127128853_127129177_127129322_127129942
ES.24377.8	chr4	+	4005	13	NNC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.1093097968503	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAATCTCTCCAGAAGA	NA	False	NA	16	True	AATAAA	-19	NA	127062982	127130814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127063159_127081251_127081360_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ES.24378.1	chr4	+	1042	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	-19	-1	-19	1	multi-exon	FALSE	canonical	3	445	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGAGTCCTGCTCTCTG	NA	False	NA	30	True	ATTAAA	-19	NA	127137557	127141603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127137692_127140695
ES.24378.2	chr4	+	838	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	-7	191	-7	-191	multi-exon	FALSE	canonical	3	445	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCTGTGTGCATTCTT	NA	False	NA	27	True	NA	NA	NA	127137569	127141411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127137692_127140695
ES.24378.3	chr4	+	1997	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	28	-1003	28	1003	multi-exon	FALSE	canonical	3	445	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGTGTTTTGCCTGTA	NA	False	NA	NA	False	NA	NA	NA	127137604	127142605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_127137692_127140695
ES.24378.5	chr4	+	908	1	NIC	ENSMUSG00000042380.9	novel	1022	2	NA	NA	3115	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGATGGAGTCCTGCTC	NA	False	NA	26	True	ATTAAA	-15	NA	127140691	127141599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_127140700_127141600
ES.24379.1	chr4	-	179	1	Intergenic	novelGene_20020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	126970727	126970548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126970500_126970700
ES.24379.2	chr4	-	180	2	Intergenic	novelGene_20021	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	127170001	126970548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_126970679_127169951
ES.24379.3	chr4	-	178	2	Antisense	novelGene_ENSMUSG00000042408.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	126985554	126970548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_126970707_126985534
ES.24379.4	chr4	-	148	1	Intergenic	novelGene_20024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAATAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	127027434	127027286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127027300_127027400
ES.24379.5	chr4	-	3968	12	Antisense	novelGene_ENSMUSG00000042388.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGGGCCCCACCCGTG	NA	False	NA	NA	False	NA	NA	NA	127130204	127062300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_127063156_127086864_127086950_127088353_127089501_127093459_127093672_127094057_127094127_127108095_127108313_127108475_127108787_127109087_127109175_127127325_127127813_127128760_127128852_127129176_127129320_127129940
ES.24379.6	chr4	-	5429	3	Antisense	novelGene_ENSMUSG00000042388.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACAATCCCACCGTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	127092416	127084360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_127089686_127090683_127090730_127092358
ES.24379.7	chr4	-	180	1	Intergenic	novelGene_20029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGAAGATAGACAACGT	8793	False	NA	NA	False	NA	NA	NA	127132704	127132524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127132500_127132700
ES.2438.1	chr10	+	191	1	Intergenic	novelGene_1859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGAACAAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	21003253	21003444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_21003300_21003400
ES.24380.1	chr4	-	5117	1	Genic_Genomic	ENSMUSG00000050234.8	novel	NA	NA	NA	NA	-2494	4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCACTGATGTTGTCA	NA	False	NA	4	True	AATAAA	-21	NA	127210326	127205209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_127205200_127210300
ES.24380.2	chr4	-	1647	2	FSM	ENSMUSG00000050234.8	ENSMUST00000053753.8	1685	2	36	2	36	-2	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGGTGTGCACTGATG	NA	False	NA	-2	True	AATAAA	-15	NA	127207796	127205215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127206779_127207712
ES.24381.1	chr4	+	1734	1	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAAGCTGGGCAGTGGTG	4334	False	NA	NA	False	NA	NA	NA	127219095	127220829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127219100_127220800
ES.24382.1	chr4	+	5049	1	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCTGAGACAGGGTC	8404	False	NA	NA	False	NA	NA	NA	127223165	127228214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127223200_127228200
ES.24382.2	chr4	+	1654	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	21.4165045389453	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGGTTTTATCT	8423	False	NA	NA	False	AATATA	-16	NA	127223184	127237406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127236890
ES.24382.3	chr4	+	1375	5	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	27.233940221716	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTATACATTTAGTG	8454	False	NA	1	True	AATATA	-45	NA	127223215	127237044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127224096_127225680_127225785_127225878_127225993_127226134_127226258_127236890
ES.24382.4	chr4	+	1335	5	Antisense	novelGene_ENSMUSG00000046623.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	38.2581690623062	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGGTGTGGCTTGGCCTC	8465	False	NA	NA	False	ACTAAA	-16	NA	127223226	127246597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127223320_127223858_127223929_127225680_127225785_127226134_127226258_127245652
ES.24382.5	chr4	+	417	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	31.7104959840674	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGCGTGTGTTTGTGT	9272	False	NA	NA	False	AATAAA	-19	NA	127224033	127232835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127232707
ES.24382.6	chr4	+	5730	2	Intergenic	novelGene_20030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTATACATTTAGTGT	NA	False	NA	2	True	AATATA	-14	NA	127230424	127237045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127231301_127232191
ES.24382.7	chr4	+	290	2	Intergenic	novelGene_20032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTGTTTTTATTTTGT	NA	False	NA	13	True	AATATA	-25	NA	127235268	127237056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127235393_127236890
ES.24382.8	chr4	+	276	2	Intergenic	novelGene_20033	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGTGTTTTTATTTT	NA	False	NA	11	True	AATATA	-23	NA	127236026	127237054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127236139_127236890
ES.24382.9	chr4	+	7380	2	Antisense	novelGene_ENSMUSG00000046623.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCGGTGTGGCTTGGCC	NA	False	NA	NA	False	ACTAAA	-14	NA	127239109	127246595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127245547_127245652
ES.24383.1	chr4	-	3784	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	-60	-2101	-60	2101	multi-exon	FALSE	canonical	3	984	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGCCAATGCCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	127223014	127216926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127220565_127222868
ES.24383.10	chr4	-	2121	2	NNC	ENSMUSG00000042367.13	novel	1880	2	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127224639	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220806_127224294
ES.24383.11	chr4	-	1556	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	1734	-2	at_least_one_novel_splicesite	FALSE	canonical	2	50	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127221220	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127221199
ES.24383.12	chr4	-	1840	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222932	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220806_127222868
ES.24383.13	chr4	-	1599	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	83	-2	at_least_one_novel_splicesite	FALSE	canonical	2	56	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222871	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127222807
ES.24383.14	chr4	-	1429	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222912	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220415_127222868
ES.24383.15	chr4	-	1107	3	NNC	ENSMUSG00000042367.13	novel	1880	2	NA	NA	214	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	468	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127224423	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127219156_127219712_127220565_127224294
ES.24383.17	chr4	-	2542	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	-13886	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127238523	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127235292_127236174_127238397
ES.24383.18	chr4	-	1734	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222959	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127220693_127220802_127222868
ES.24383.19	chr4	-	427	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	492	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222925	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127219188_127220352_127220565_127222868
ES.24383.2	chr4	-	1687	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	-61	-3	-61	3	multi-exon	FALSE	canonical	3	984	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTTCCCTCCATTCTCC	NA	False	NA	-2	True	AATAAA	-20	NA	127223015	127219024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127220565_127222868
ES.24383.20	chr4	-	1629	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	1474	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127221480	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127221386
ES.24383.22	chr4	-	1024	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	470	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTCGGTTCTTCCCTCC	NA	False	NA	-9	True	AATAAA	-13	NA	127222916	127219031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127219156_127219712_127220565_127222868
ES.24383.23	chr4	-	2448	3	NNC	ENSMUSG00000046623.9	novel	1445	2	NA	NA	2	9984	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCAAGTTGTGCTTCTT	4506	False	NA	NA	False	AATAAA	-19	NA	127247872	127234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127236174_127245152_127246275_127247825
ES.24383.24	chr4	-	1489	1	Intergenic	novelGene_20031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACCCAAGTTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	127236387	127234898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127234900_127236400
ES.24383.25	chr4	-	3451	1	Intergenic	novelGene_20034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127241628	127238177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127238200_127241600
ES.24383.26	chr4	-	2358	1	Intergenic	novelGene_20035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	127241628	127239270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127239300_127241600
ES.24383.27	chr4	-	2405	3	NNC	ENSMUSG00000046623.9	novel	1445	2	NA	NA	-1	1301	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	27.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTGTGAGCCTCGT	4503	False	NA	NA	False	NA	NA	NA	127247875	127243577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127244422_127244763_127246275_127247825
ES.24383.28	chr4	-	2915	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	-169	-1301	-169	1301	multi-exon	FALSE	canonical	3	55	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTGTGAGCCTCGT	4335	False	NA	NA	False	NA	NA	NA	127248043	127243577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127246275_127247825
ES.24383.29	chr4	-	5440	2	FSM	ENSMUSG00000046623.9_ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	4	-3723	4	0	multi-exon	FALSE	canonical	3	573	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	408	False	NA	-10	True	AATAAA	-17	NA	127251970	127244878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127250167_127251818
ES.24383.3	chr4	-	1952	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	-73	1	-73	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCTTCCCTCCATT	NA	False	NA	-6	True	AATAAA	-16	NA	127224710	127219028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127220565_127224294
ES.24383.30	chr4	-	1966	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	-522	1	-522	-1	multi-exon	FALSE	canonical	3	55	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGTCAGGCGGAGA	3982	False	NA	-11	True	AATAAA	-16	NA	127248396	127244879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127246275_127247825
ES.24383.31	chr4	-	1643	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	-310	388	-310	-388	multi-exon	FALSE	canonical	3	573	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTTTGGGTCT	94	False	NA	-8	True	AATAAA	-20	NA	127252284	127248989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_127250167_127251818
ES.24383.32	chr4	-	2975	1	NIC	ENSMUSG00000042357.3	novel	1721	2	NA	NA	9	-389	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGGTGTCCTTTGGGTC	413	False	NA	-9	True	AATAAA	-19	NA	127251965	127248990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_127249000_127252000
ES.24383.34	chr4	-	1370	3	NNC	ENSMUSG00000042357.3	novel	1721	2	NA	NA	-7148	-390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGGTGTCCTTTGGGT	NA	False	NA	-10	True	AATAAA	-18	NA	127259122	127248991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127250164_127255873_127256000_127259050
ES.24383.35	chr4	-	1288	2	NNC	ENSMUSG00000042357.3	novel	1721	2	NA	NA	31	-390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGGTGTCCTTTGGGT	435	False	NA	-10	True	AATAAA	-18	NA	127251943	127248991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127250167_127251830
ES.24383.4	chr4	-	1600	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222927	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127222862
ES.24383.5	chr4	-	1606	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222927	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127222856
ES.24383.6	chr4	-	1147	3	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	492	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222925	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127219434_127219878_127220565_127222868
ES.24383.7	chr4	-	1803	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	632	-2	at_least_one_novel_splicesite	FALSE	canonical	3	106	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127224005	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127223737
ES.24383.8	chr4	-	2285	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	661	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127222293	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127220565_127221543
ES.24383.9	chr4	-	5394	1	NIC	ENSMUSG00000042367.13	novel	1880	2	NA	NA	214	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	814	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGGTTCTTCCCTCCAT	NA	False	NA	-7	True	AATAAA	-15	NA	127224423	127219029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_127219000_127224400
ES.24384.1	chr4	-	182	1	Intergenic	novelGene_20036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATATATATATAA	NA	False	NA	NA	False	NA	NA	NA	127287088	127286906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127286900_127287100
ES.24385.1	chr4	+	2653	3	NNC	ENSMUSG00000087470.3	novel	880	5	NA	NA	-66198	-2	intron_retention	FALSE	canonical	0	0	junction_2	0.5	100	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCTTGCTTATATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	127302442	127426682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127302541_127311191_127311321_127424256
ES.24385.2	chr4	+	1846	4	Antisense	novelGene_ENSMUSG00000079998.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTTTTGTCAGAAT	NA	False	NA	2	True	NA	NA	NA	127302473	127323121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127302541_127311191_127311321_127318586_127319254_127322138
ES.24385.3	chr4	+	455	4	Antisense	novelGene_ENSMUSG00000079998.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGAGGCTAGCGCTCT	NA	False	NA	NA	False	NA	NA	NA	127302521	127308262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_127302541_127302789_127302970_127303602_127303687_127308090
ES.24385.4	chr4	+	2806	1	Intergenic	novelGene_20037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTAGTCGTATATGTT	NA	False	NA	NA	False	NA	NA	NA	127304111	127306917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127304100_127306900
ES.24385.5	chr4	+	4121	1	Intergenic	novelGene_20038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTGCTTTTGTCAGAA	NA	False	NA	1	True	NA	NA	NA	127318999	127323120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127319000_127323100
ES.24385.6	chr4	+	3663	1	Intergenic	novelGene_20039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGCATTGCAAATGT	NA	False	NA	NA	False	NA	NA	NA	127319997	127323660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127320000_127323700
ES.24385.7	chr4	+	197	1	Intergenic	novelGene_20040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACTGACTAAG	NA	False	NA	NA	False	NA	NA	NA	127343300	127343497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_127343300_127343500
ES.24386.1	chr4	-	177	1	Intergenic	novelGene_20041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	127394590	127394413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_127394400_127394600
ES.24387.1	chr4	+	2142	3	NNC	ENSMUSG00000028804.21	novel	3034	13	NA	NA	43	-278281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	127881692	127955169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_127882065_127952754_127952972_127953616
ES.24388.1	chr4	-	2110	7	NNC	ENSMUSG00000028813.3	novel	2319	7	NA	NA	-17288	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCGTGTGCCTGTTCA	NA	False	NA	NA	False	GATAAA	-16	NA	127882032	127821386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_127821872_127829599_127829797_127833827_127833906_127838976_127839153_127840440_127840702_127844738_127845428_127881808
ES.24389.1	chr4	+	177	1	Intergenic	novelGene_20042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128006105	128006282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128006100_128006300
ES.2439.1	chr10	-	3233	15	NNC	ENSMUSG00000019982.16	novel	3074	15	NA	NA	1788	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.13541127657677	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGTCTCTCGATTCTG	NA	False	NA	-1	True	AATAAA	-25	NA	21034961	21000830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21034857
ES.2439.2	chr10	-	3538	15	FSM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	-122	-342	-122	1	multi-exon	FALSE	canonical	2	3	junction_10	4.58257569495584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATGTCTCTCGATTC	NA	False	NA	-3	True	AATAAA	-23	NA	21037005	21000832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ES.2439.3	chr10	-	4152	16	FSM	ENSMUSG00000019982.16	ENSMUST00000188495.8	3693	16	-458	-1	-379	1	multi-exon	FALSE	canonical	2	3	junction_11	4.59951688284276	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATGTCTCTCGATTC	NA	False	NA	-3	True	AATAAA	-23	NA	21037262	21000832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21020867_21021225_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ES.2439.4	chr10	-	2200	7	NIC	ENSMUSG00000019982.16	novel	3074	15	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.21966296705739	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGATGTCTCTCGAT	NA	False	NA	-5	True	AATAAA	-21	NA	21036862	21000834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21032238_21032357_21036594
ES.2439.5	chr10	-	3253	15	NNC	ENSMUSG00000019982.16	novel	3074	15	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.25327885948483	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGATGTCTCTCGAT	NA	False	NA	-5	True	AATAAA	-21	NA	21036760	21000834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_21002189_21015191_21015260_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024338_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ES.24390.1	chr4	+	2313	11	ISM	ENSMUSG00000028804.21	ENSMUST00000129619.8	3034	13	125885	-2	125698	2	3prime_fragment	FALSE	canonical	0	0	junction_1	1.24899959967968	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGTTTTCTATGACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	128007534	128233452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_128007557_128090994_128091190_128103509_128103718_128170943_128171057_128185171_128185250_128190187_128190276_128190978_128191104_128200155_128200278_128215040_128215145_128215811_128215925_128232307
ES.24391.1	chr4	+	160	1	Intergenic	novelGene_20043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACATATTTT	NA	False	NA	NA	False	NA	NA	NA	128361016	128361176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128361000_128361200
ES.24392.1	chr4	-	1511	6	Antisense	novelGene_ENSMUSG00000028804.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGGTCTTGTGGCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	128437964	128390292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_128391174_128391758_128391842_128400115_128400219_128403178_128403324_128404013_128404163_128437814
ES.24393.1	chr4	+	1576	1	Antisense	novelGene_ENSMUSG00000061894.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATACATACATA	NA	False	NA	NA	False	NA	NA	NA	128497586	128499162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_128497600_128499200
ES.24394.1	chr4	-	3737	2	Intergenic	novelGene_20044	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAACCCACCCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	128476268	128472052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128475461_128475939
ES.24394.10	chr4	-	3550	8	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	-6	15	intron_retention	FALSE	canonical	1	2	junction_7	7.34846922834953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTCACTTGAGAACTTA	NA	False	NA	NA	False	AATACA	-31	NA	128503794	128479152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503690
ES.24394.12	chr4	-	3547	8	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	2	4	junction_2	6.72794962246664	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATGTCTTTACAAATGCT	NA	False	NA	NA	False	AATACA	-15	NA	128503906	128479168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ES.24394.13	chr4	-	3589	9	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	13	-3	intron_retention	FALSE	canonical	1	1	junction_8	8.30286095270781	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGATGTCTTTACAAATG	NA	False	NA	NA	False	AATACA	-13	NA	128503814	128479170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128502822_128502956_128503786
ES.24394.14	chr4	-	3346	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	64	1954	0	-126	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTAGAGGTGCCATCT	NA	False	NA	NA	False	AAGAAA	-24	NA	128503827	128479293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ES.24394.15	chr4	-	3292	2	FSM	ENSMUSG00000061894.16	ENSMUST00000151226.2	3323	2	24	7	-15	-7	multi-exon	FALSE	canonical	3	16	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128503803	128495230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128498506_128503786
ES.24394.2	chr4	-	10083	9	NNC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	18	5274	intron_retention	TRUE	non_canonical	0	0	junction_1	8.19203118890547	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAACCCACCCC	NA	False	NA	NA	False	NA	NA	NA	128503809	128472057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_128475453_128475930_128480638_128481808_128482235_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ES.24394.3	chr4	-	10167	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	65	-4868	1	4860	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTTTCACAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	128503826	128472471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ES.24394.4	chr4	-	5313	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	59	-8	3	0	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTATTTCTTTCTGT	NA	False	NA	2	True	NA	NA	NA	128503832	128477331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ES.24394.6	chr4	-	6362	7	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	5	3	intron_retention	FALSE	canonical	1	2	junction_6	7.82623792124926	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACATTTTGTATTTCTT	NA	False	NA	-3	True	NA	NA	NA	128503783	128477336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128480638_128481808_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503690
ES.24394.7	chr4	-	5323	8	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	27	2	intron_retention	FALSE	canonical	2	2	junction_7	7.34846922834953	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACATTTTGTATTTCT	NA	False	NA	-4	True	NA	NA	NA	128503864	128477337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503802
ES.24394.8	chr4	-	5393	8	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	818	0	intron_retention	FALSE	canonical	1	3	junction_7	7.0797209676365	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	False	NA	-6	True	NA	NA	NA	128502956	128477339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128502822
ES.24395.1	chr4	+	180	1	Intergenic	novelGene_20045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTCTCAGC	NA	False	NA	NA	False	NA	NA	NA	128505767	128505947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128505800_128505900
ES.24395.2	chr4	+	303	1	Intergenic	novelGene_20046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTTGCCTTGGTGTA	NA	False	NA	NA	False	NA	NA	NA	128505769	128506072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128505800_128506100
ES.24396.1	chr4	+	1817	1	Genic_Genomic	ENSMUSG00000028796.18	novel	NA	NA	NA	NA	-4	-49149	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAAAAGAAAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	128548490	128550307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_128548500_128550300
ES.24396.10	chr4	+	2445	7	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	50.0513625078168	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGTGGCTTTCTCCC	NA	False	NA	14	True	AATAAA	-15	NA	128621366	128646668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.11	chr4	+	2613	8	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-7	-7	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	86.6015977606296	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621366	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128621664_128635708_128635878_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.12	chr4	+	2594	8	NNC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.3755210340572	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621384	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640436_128640605_128640893_128641036_128641800_128642078_128645292
ES.24396.13	chr4	+	2680	8	NNC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.6279418200713	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTCTGTGGCTTTCTC	NA	False	NA	12	True	AATAAA	-13	NA	128621389	128646666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640439_128640605_128640893_128641036_128641800_128642078_128645292
ES.24396.14	chr4	+	2497	7	NNC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	23	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.7092896507992	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTCTGTGGCTTTCT	NA	False	NA	11	True	AATAAA	-12	NA	128621400	128646665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128621664_128637152_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.15	chr4	+	5622	6	FSM	ENSMUSG00000028796.18	ENSMUST00000138445.2	894	6	-71	-4657	26	-7	multi-exon	FALSE	canonical	3	61	junction_2	54.6574789027083	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621403	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800
ES.24396.17	chr4	+	3336	8	NNC	ENSMUSG00000028796.18	novel	3949	15	NA	NA	9455	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.0091064227101	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCCTCTTCTGTGG	NA	False	NA	5	True	AATAAA	-6	NA	128631229	128646659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128631706_128635708_128635878_128637146_128637350_128638794_128638925_128639582_128639698_128640436_128641036_128641800_128642078_128645292
ES.24396.2	chr4	+	4101	16	NNC	ENSMUSG00000028796.18	novel	3949	15	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.7412127016848	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128548497	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128548610_128598790_128599028_128601729_128601889_128602223_128602386_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.3	chr4	+	3873	15	FSM	ENSMUSG00000028796.18	ENSMUST00000030588.13	3949	15	67	9	31	-9	multi-exon	FALSE	canonical	1	2	junction_6	86.1216806475061	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTCTGTGGCTTTCT	NA	False	NA	11	True	AATAAA	-12	NA	128548561	128646665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.4	chr4	+	3044	7	FSM	ENSMUSG00000028796.18	ENSMUST00000136377.8	941	7	50	-2153	50	2153	multi-exon	FALSE	canonical	1	2	junction_6	4.53382350291181	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTTTCGTGTTG	NA	False	NA	NA	False	NA	NA	NA	128548580	128608140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851
ES.24396.5	chr4	+	2168	7	NIC	ENSMUSG00000028796.18	novel	3949	15	NA	NA	58	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.7948759145738	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128548588	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128548610_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.6	chr4	+	3827	14	ISM	ENSMUSG00000028796.18	ENSMUST00000106080.8	3885	15	16201	9	-5168	-9	3prime_fragment	FALSE	canonical	1	2	junction_5	87.8347695708376	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTCTGTGGCTTTCT	NA	False	NA	11	True	AATAAA	-12	NA	128598788	128646665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.7	chr4	+	2574	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	-39	0	-35	0	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621338	128646674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.8	chr4	+	2671	8	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-26	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	85.4345435084064	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621347	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128621664_128621879_128621993_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ES.24396.9	chr4	+	3002	7	NNC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	69.9134385428788	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCTGTGGCTTTCTCC	NA	False	NA	13	True	AATAAA	-14	NA	128621360	128646667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640436_128641036_128641800_128642078_128645292
ES.24397.1	chr4	-	3188	9	FSM	ENSMUSG00000028799.16	ENSMUST00000106072.9	2812	9	-377	1	-377	-1	multi-exon	FALSE	canonical	3	13	junction_4	3.19912097301743	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCGGCTTTTCAGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	128700215	128666881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643_128688770_128699804
ES.24397.2	chr4	-	3245	10	NNC	ENSMUSG00000028799.16	novel	2812	9	NA	NA	-397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.39369100427294	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	128700235	128666896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128687113_128687166_128688643_128688770_128699804
ES.24397.4	chr4	-	2964	8	NIC	ENSMUSG00000028799.16	novel	2674	8	NA	NA	-294	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	5.03457433905889	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	128700132	128666896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128699804
ES.24397.5	chr4	-	2163	9	FSM	ENSMUSG00000028799.16	ENSMUST00000106072.9	2812	9	-396	1045	-396	-1029	multi-exon	FALSE	canonical	3	13	junction_4	3.19912097301743	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGGGCAGCGTGGGA	NA	False	NA	NA	False	ATTAAA	-25	NA	128700234	128667925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643_128688770_128699804
ES.24398.1	chr4	+	1894	1	Intergenic	novelGene_20047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTTTCCCCACTGAGC	NA	False	NA	NA	False	NA	NA	NA	128705435	128707329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128705400_128707300
ES.24399.1	chr4	-	207	1	Intergenic	novelGene_20048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACTATATACATGATC	3473	False	NA	NA	False	NA	NA	NA	128741633	128741426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128741400_128741600
ES.244.1	chr1	+	4479	2	NNC	ENSMUSG00000045174.11	novel	4392	2	NA	NA	-660	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTGTCAAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	34618077	34630023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34618277_34625743
ES.2440.1	chr10	-	170	1	Intergenic	novelGene_1860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACATGGCTTATTACC	6954	False	NA	NA	False	NA	NA	NA	21146004	21145834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21145800_21146000
ES.24400.1	chr4	+	3812	5	FSM	ENSMUSG00000041000.9	ENSMUST00000035667.9	3752	5	-60	0	-52	0	multi-exon	TRUE	canonical	1	1	junction_4	1.78535710713571	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACGTTCCATTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	128777320	128805121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802828
ES.24400.2	chr4	+	3766	5	NNC	ENSMUSG00000041000.9	novel	3752	5	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.12132034355964	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGGTGTACGTTCCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	128777356	128805117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802834
ES.24401.1	chr4	+	4825	1	Antisense	novelGene_ENSMUSG00000028789.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGAGCTTGAGTTCGAG	4706	False	NA	NA	False	NA	NA	NA	128850870	128855695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_128850900_128855700
ES.24402.1	chr4	-	2474	9	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	-1	781	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTTATTATTTATT	NA	False	NA	NA	False	CATAAA	-19	NA	128856233	128825033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855998_128856093
ES.24402.10	chr4	-	1569	9	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	-1	-124	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGTCTGCCTCTGCAG	NA	False	NA	NA	False	CATAAA	-14	NA	128856233	128825938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855998_128856093
ES.24402.11	chr4	-	1764	10	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	1	-124	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.90831211236775	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGTCTGCCTCTGCAG	NA	False	NA	NA	False	CATAAA	-14	NA	128856231	128825938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855155_128855353_128855876_128855998_128856093
ES.24402.12	chr4	-	4481	2	Antisense	novelGene_ENSMUSG00000085961.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAGAAAAAGAAATGAT	NA	False	NA	NA	False	NA	NA	NA	128833283	128828752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_128832815_128832864
ES.24402.13	chr4	-	4854	6	NIC	ENSMUSG00000028789.17	novel	1490	8	NA	NA	1	23	intron_retention	FALSE	canonical	0	0	junction_5	9.2217135067188	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGTTTTAAAAAAATGGA	NA	False	NA	NA	False	NA	NA	NA	128856231	128839466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
ES.24402.2	chr4	-	2349	8	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	3	781	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.7411763090162	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTTATTATTTATT	NA	False	NA	NA	False	CATAAA	-19	NA	128856229	128825033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128856093
ES.24402.3	chr4	-	4533	7	ISM	ENSMUSG00000028789.17	ENSMUST00000119354.8	1921	9	-20	1010	-1	779	intron_retention	FALSE	canonical	3	9	junction_6	5.87130498460285	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAACTGTTATTATTTA	NA	False	NA	NA	False	CATAAA	-17	NA	128856233	128825035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876
ES.24402.4	chr4	-	2113	12	NNC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.5493723130027	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCAGTGGAATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	128856232	128825807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855516_128855560_128855876_128855998_128856093
ES.24402.5	chr4	-	1795	8	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	-1	6	intron_retention	FALSE	canonical	3	9	junction_7	5.93845991166472	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCTTCAGTGGAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	128856233	128825808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876
ES.24402.6	chr4	-	1883	10	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.90831211236775	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCTTCAGTGGAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	128856220	128825808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855155_128855353_128855876_128855998_128856093
ES.24402.7	chr4	-	2073	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	-5	-5	-2	5	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTTCAGTGGAATC	NA	False	NA	NA	False	AATAAA	-23	NA	128856237	128825809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
ES.24402.8	chr4	-	1575	8	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.7411763090162	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTTCAGTGGAATC	NA	False	NA	NA	False	AATAAA	-23	NA	128856231	128825809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128856093
ES.24402.9	chr4	-	1691	9	NIC	ENSMUSG00000028789.17	novel	2049	11	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.93028554974588	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACCCTTCAGTGGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	128856230	128825810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855876_128855995_128856093
ES.24403.1	chr4	+	1858	7	NNC	ENSMUSG00000028792.15	novel	356	3	NA	NA	-2847	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	794.617727799559	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	NA	False	NA	29	True	AATAAA	-19	NA	128882903	128905322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128883194_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.11	chr4	+	1738	7	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	804.416230705362	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTGTTGTGGAGTTTT	2933	False	NA	27	True	AATAAA	-17	NA	128887080	128905320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128887230_128892926_128893053_128895943_128896055_128896143_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.13	chr4	+	902	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	81	3	-48	-3	multi-exon	FALSE	canonical	3	1917	junction_3	119.822535443046	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGCAGCACTCATCTA	2950	False	NA	19	True	ATTAAA	-23	NA	128887097	128902191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ES.24403.18	chr4	+	4572	6	NIC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	1917	junction_2	114.412586720168	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTGTTGTGGAGTTTT	2967	False	NA	27	True	AATAAA	-17	NA	128887114	128905320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128887230_128892926_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.19	chr4	+	1907	8	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	927.485496888644	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2970	False	NA	28	True	AATAAA	-18	NA	128887117	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128887230_128892926_128893053_128895288_128895517_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.2	chr4	+	1799	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	-16	-2	-16	2	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTGGAGTTTTTTGA	2853	False	NA	31	True	AATAAA	-21	NA	128887000	128905324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.20	chr4	+	1743	8	NIC	ENSMUSG00000028792.15	novel	749	7	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	920.647265653411	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2970	False	NA	28	True	AATAAA	-18	NA	128887117	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128887230_128892926_128893053_128895288_128895353_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.3	chr4	+	3342	7	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	803.298564254495	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2865	False	NA	28	True	AATAAA	-18	NA	128887012	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128903581_128904355
ES.24403.4	chr4	+	4175	7	FSM	ENSMUSG00000028792.15	ENSMUST00000152762.2	749	7	-127	-3299	2	-1	multi-exon	FALSE	canonical	3	46	junction_3	971.101207678971	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2871	False	NA	28	True	AATAAA	-18	NA	128887018	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128887230_128892926_128893053_128895288_128895353_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ES.24403.5	chr4	+	4106	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	6	-3126	6	-2	multi-exon	FALSE	canonical	3	1917	junction_3	119.822535443046	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTGTTGTGGAGTTTT	2875	False	NA	27	True	AATAAA	-17	NA	128887022	128905320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ES.24403.6	chr4	+	1624	6	NIC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	29	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	835.681374687745	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTGTTGTGGAGTTTT	2898	False	NA	27	True	AATAAA	-17	NA	128887045	128905320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128887230_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.7	chr4	+	2403	7	NIC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	32	-1	intron_retention	FALSE	canonical	3	74	junction_2	757.28867606012	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2901	False	NA	28	True	AATAAA	-18	NA	128887048	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128887230_128892926_128893053_128895288_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.8	chr4	+	3331	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	37	-1587	37	1587	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGTTCTCTTTATTTG	2906	False	NA	NA	False	NA	NA	NA	128887053	128906909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ES.24403.9	chr4	+	1490	8	NNC	ENSMUSG00000028792.15	novel	1781	7	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_7	740.74314587667	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTTGTGGAGTTTTT	2910	False	NA	28	True	AATAAA	-18	NA	128887057	128905321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355_128904425_128904673
ES.24404.1	chr4	+	179	1	Intergenic	novelGene_20049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	128912239	128912418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128912200_128912400
ES.24405.1	chr4	-	159	1	Intergenic	novelGene_20050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAGATA	4206	False	NA	NA	False	NA	NA	NA	128931703	128931544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128931500_128931700
ES.24406.1	chr4	-	981	2	FSM	ENSMUSG00000085085.3	ENSMUST00000149472.3	1009	2	46	-18	46	18	multi-exon	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTGGCTCTTTTTGCT	NA	False	NA	0	True	AATAAA	-34	NA	128951730	128943871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_128944703_128951580
ES.24406.2	chr4	-	1155	3	NNC	ENSMUSG00000085085.3	novel	1009	2	NA	NA	7	16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTCTTGGCTCTTTTTG	NA	False	NA	-2	True	AATAAA	-32	NA	128951769	128943873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_128944703_128944860_128944998_128951580
ES.24406.3	chr4	-	5190	1	Genic_Genomic	ENSMUSG00000085085.3	novel	NA	NA	NA	NA	2711	14	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACACTTCTTGGCTCTTTT	NA	False	NA	-4	True	AATAAA	-30	NA	128949065	128943875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_128943900_128949100
ES.24406.4	chr4	-	5443	1	NIC	ENSMUSG00000085085.3	novel	1009	2	NA	NA	16	-2428	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGTCATGAAAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	128951760	128946317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_128946300_128951800
ES.24407.1	chr4	+	2721	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-188	-1	-188	1	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTCACTGTCCTTGGC	NA	False	NA	17	True	AATAAA	-20	NA	128951875	128978320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.10	chr4	+	2360	10	NNC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-130	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.6012728333778	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	15	True	AATAAA	-18	NA	128951933	128978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128951951_128952251_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.11	chr4	+	4001	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-128	-1341	-128	-19	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTGGTCTAGAGTCAAAC	NA	False	NA	NA	False	GATAAA	-22	NA	128951935	128979660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.12	chr4	+	2537	10	NNC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-124	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.6012728333778	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	15	True	AATAAA	-18	NA	128951939	128978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128952134_128952251_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.15	chr4	+	1396	5	ISM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	17346	1	-2811	-1	3prime_fragment	FALSE	canonical	3	150	junction_2	17.2970373185699	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	7354	False	NA	15	True	AATAAA	-18	NA	128969952	128978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.2	chr4	+	4248	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	-187	-1529	-187	169	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGGTAATGCTATAGAA	NA	False	NA	NA	False	NA	NA	NA	128951876	128979848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.4	chr4	+	2413	10	NNC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-182	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.6012728333778	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCTCATGTCACTGT	NA	False	NA	10	True	AATAAA	-13	NA	128951881	128978313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128951951_128952245_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.6	chr4	+	2396	10	NNC	ENSMUSG00000028793.16	novel	2414	10	NA	NA	-170	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.3092645153547	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCATGTCACTGTCCTT	NA	False	NA	14	True	AATAAA	-17	NA	128951893	128978317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128951951_128952257_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.7	chr4	+	2491	8	NIC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-166	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	56.7371310590897	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	15	True	AATAAA	-18	NA	128951897	128978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128952690_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ES.24407.8	chr4	+	3983	8	NIC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-158	-1	intron_retention	FALSE	canonical	3	132	junction_2	18.2343027264101	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATGTCACTGTCCTTG	NA	False	NA	15	True	AATAAA	-18	NA	128951905	128978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128974343_128976539_128976672_128977520
ES.24407.9	chr4	+	3773	7	NNC	ENSMUSG00000028793.16	novel	2532	9	NA	NA	-138	-3	intron_retention	TRUE	canonical	1	1	junction_6	72.5597454975324	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCATGTCACTGTCCT	NA	False	NA	13	True	AATAAA	-16	NA	128951925	128978316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_128952690_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128974343_128976539_128976672_128977502
ES.24408.1	chr4	+	204	1	Intergenic	novelGene_20054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGAGGACAGTCCTTTA	3370	False	NA	NA	False	NA	NA	NA	128996683	128996887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_128996700_128996900
ES.24409.1	chr4	+	274	1	Intergenic	novelGene_20055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAATAAATATT	7098	False	NA	NA	False	AATATA	-18	NA	129017860	129018134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129017900_129018100
ES.2441.1	chr10	+	6117	16	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	-30	0	intron_retention	FALSE	canonical	3	828	junction_13	101.605030496635	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171847	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21243686_21244187
ES.2441.10	chr10	+	2664	17	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	253.84047032536	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171910	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.11	chr10	+	2537	17	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_7	337.223590515254	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171910	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218352_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.12	chr10	+	2721	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	251.145169560897	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21171910	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240644_21243540_21243686_21244187
ES.2441.14	chr10	+	5588	15	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	4	intron_retention	FALSE	canonical	3	32	junction_13	268.433513221446	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171910	21244786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21243540_21243686_21244187
ES.2441.15	chr10	+	2814	18	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171910	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
ES.2441.18	chr10	+	4886	5	NNC	ENSMUSG00000019977.17	novel	2625	5	NA	NA	3	2334	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	565.708129250411	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACAATTCTGAGGTTT	NA	False	NA	NA	False	TATAAA	-15	NA	21171910	21189442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183587_21183679_21184992
ES.2441.19	chr10	+	2980	19	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	306.115592828656	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATTTCTT	NA	False	NA	22	True	AATAAA	-24	NA	21171910	21244792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.2	chr10	+	2421	15	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	256.472459435667	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATTTCTT	NA	False	NA	22	True	AATAAA	-24	NA	21171878	21244792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.20	chr10	+	2883	19	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	323.566434684318	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171910	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21232001_21232116_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.22	chr10	+	6151	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	4	-103	intron_retention	FALSE	canonical	3	31	junction_5	324.120323915363	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTTCTGGAGTGT	NA	False	NA	-91	True	AATAAA	-11	NA	21171911	21244679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21243686_21244187
ES.2441.23	chr10	+	5625	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	4	6	intron_retention	FALSE	canonical	3	828	junction_14	100.045595074196	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171911	21244788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21243686_21244187
ES.2441.24	chr10	+	3452	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-20	-699	4	684	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGTTGAAACTTACTA	NA	False	NA	NA	False	AATAAA	-19	NA	21171911	21245481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.25	chr10	+	2833	19	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	323.566434684318	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAAAATGTGTTTTATT	NA	False	NA	18	True	AATAAA	-20	NA	21171912	21244788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21232001_21232077_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.26	chr10	+	2443	16	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	250.794417800716	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171912	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.27	chr10	+	4335	5	FSM	ENSMUSG00000019977.17	ENSMUST00000061324.6	1998	5	-4	-2333	-4	2330	multi-exon	FALSE	canonical	0	0	junction_4	490.144366488079	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATTACAATTCTGAG	NA	False	NA	NA	False	TATAAA	-11	NA	21171912	21189438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21185641
ES.2441.28	chr10	+	2654	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-19	98	-4	-98	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGGAGTGTAATGC	NA	False	NA	-86	True	AATAAA	-16	NA	21171912	21244684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.29	chr10	+	2591	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-4	5	combination_of_known_splicesites	FALSE	canonical	1	18	junction_6	254.847963254565	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAAAATGTGTTTTAT	NA	False	NA	17	True	AATAAA	-19	NA	21171912	21244787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.3	chr10	+	5718	16	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	1	-5	intron_retention	FALSE	canonical	3	89	junction_4	245.906070595168	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATTTCTT	NA	False	NA	22	True	AATAAA	-24	NA	21171878	21244792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.30	chr10	+	2637	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-23	11	-3	-8	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAGTATGTTTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	21171913	21187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
ES.2441.31	chr10	+	5481	18	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	2	intron_retention	FALSE	canonical	3	31	junction_5	314.947889356923	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171913	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.32	chr10	+	5686	16	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	4	intron_retention	FALSE	canonical	3	828	junction_12	99.7626962123396	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171913	21244786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.33	chr10	+	3306	5	NNC	ENSMUSG00000019977.17	novel	1998	5	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	489.713372800866	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGAAGTATGTTTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	21171913	21187096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21184993_21185641
ES.2441.34	chr10	+	2990	19	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	323.438208459294	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171913	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21241974_21242199_21243540_21243686_21244187
ES.2441.35	chr10	+	4484	17	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	0	intron_retention	FALSE	canonical	2	9	junction_4	256.187728714218	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171913	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21184993_21212865_21212975_21217612_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.36	chr10	+	5902	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	4	intron_retention	FALSE	canonical	3	31	junction_5	324.560995567474	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171913	21244786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.37	chr10	+	5716	16	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	5	junction_1	263.827384645508	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171913	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175057_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.38	chr10	+	5580	16	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-2	-101	intron_retention	FALSE	canonical	3	828	junction_12	99.7626962123396	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTTCTGGAGTGTAA	NA	False	NA	-89	True	AATAAA	-13	NA	21171914	21244681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.4	chr10	+	2790	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-42	-15	12	0	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171889	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.40	chr10	+	2791	19	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	314.687700372023	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21171916	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21175574_21175620_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.41	chr10	+	2643	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	39	111	0	-96	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGAGTGTAATGCGA	NA	False	NA	-84	True	AATAAA	-18	NA	21171916	21244686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.42	chr10	+	2031	15	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-15	9919	0	-6202	5prime_fragment	FALSE	canonical	3	828	junction_14	103.252612755399	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGGTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21171916	21234863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630
ES.2441.43	chr10	+	5261	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	1	2	intron_retention	FALSE	canonical	3	828	junction_13	98.4351785440551	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171917	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.45	chr10	+	3232	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	4	intron_retention	FALSE	non_canonical	0	0	junction_4	331.794147629798	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171918	21244786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184929_21184993_21212865_21212975_21217612_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.46	chr10	+	8678	15	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	828	junction_11	101.339498111798	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171918	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.47	chr10	+	2763	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	247.848639489681	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21171918	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175057_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.48	chr10	+	2908	19	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	314.687700372023	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171918	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21176706_21176869_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.49	chr10	+	5723	16	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	3	2	intron_retention	FALSE	canonical	3	88	junction_15	243.917709256398	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171919	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
ES.2441.5	chr10	+	5055	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	-41	-2389	-12	2389	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTTCTATAGGAGTTT	NA	False	NA	NA	False	TATAAA	-18	NA	21171895	21189497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
ES.2441.50	chr10	+	2679	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	246.476981366922	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTGCAAAAATGTGTT	NA	False	NA	13	True	AATAAA	-15	NA	21171920	21244783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.51	chr10	+	2649	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	249.905573862911	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171920	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217782_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.52	chr10	+	3246	17	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_7	258.903147612674	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171920	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220972_21221094_21223160_21223308_21225210_21225286_21227825_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.53	chr10	+	2815	19	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	322.544269140773	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATTTCTT	NA	False	NA	22	True	AATAAA	-24	NA	21171922	21244792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184929_21184993_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.54	chr10	+	2201	14	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	352.769599785107	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171922	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21212865_21212975_21217612_21217879_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.55	chr10	+	1253	6	FSM	ENSMUSG00000019977.17	ENSMUST00000218785.2	948	6	-5	-300	-5	300	multi-exon	FALSE	canonical	3	31	junction_5	524.818216147268	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	21171923	21213375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865
ES.2441.56	chr10	+	2808	19	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	318.713468010622	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATGTGTTTTATTTCT	NA	False	NA	21	True	AATAAA	-23	NA	21171923	21244791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21182263_21182322_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.57	chr10	+	2269	15	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-5	-97	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	256.472459435667	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGTAATGCG	NA	False	NA	-85	True	AATAAA	-17	NA	21171923	21244685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.59	chr10	+	2867	19	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	322.386624726382	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171923	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21241551_21241663_21243540_21243686_21244187
ES.2441.6	chr10	+	2770	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	23	0	-7	0	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171900	21244797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.60	chr10	+	5627	4	NIC	ENSMUSG00000019977.17	novel	2625	5	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	88	junction_3	505.406986716866	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAGTATGTTTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	21171924	21187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21175143_21180428_21180543_21183483_21183679_21184997
ES.2441.61	chr10	+	2639	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_15	251.148735812068	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171924	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21243540_21243686_21244187
ES.2441.62	chr10	+	4054	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	248.583989830399	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171924	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21184993_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.63	chr10	+	2640	17	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	257.923370100016	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATTTCTT	NA	False	NA	22	True	AATAAA	-24	NA	21171925	21244792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.64	chr10	+	5787	16	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-3	2	intron_retention	FALSE	canonical	3	31	junction_5	393.564192138123	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171925	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21243540_21243686_21244187
ES.2441.66	chr10	+	3162	17	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-2	5	intron_retention	FALSE	canonical	3	828	junction_13	98.7249968346416	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAAAATGTGTTTTAT	NA	False	NA	17	True	AATAAA	-19	NA	21171926	21244787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.67	chr10	+	2700	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	248.762167374693	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCAAAAATGTGTTTTA	NA	False	NA	16	True	AATAAA	-18	NA	21171930	21244786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225248_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.68	chr10	+	2515	5	NNC	ENSMUSG00000019977.17	novel	2625	5	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	545.630999394279	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGAAGTATGTTTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	21171930	21187096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183587_21183679_21184997
ES.2441.69	chr10	+	5818	18	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-1	2	intron_retention	FALSE	canonical	3	31	junction_5	314.536589979586	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	False	NA	14	True	AATAAA	-16	NA	21171930	21244784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21243686_21244187
ES.2441.7	chr10	+	2663	18	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	388.495572289545	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171909	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184918_21184993_21212865_21212975_21217612_21217879_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.70	chr10	+	2849	19	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-1	-101	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	306.115592828656	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTTCTGGAGTGTAA	NA	False	NA	-89	True	AATAAA	-13	NA	21171930	21244681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.71	chr10	+	1633	12	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	3132	-2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	287.506291702625	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21175088	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21175125_21221049_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.73	chr10	+	2523	16	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	8495	2	8470	-2	3prime_fragment	FALSE	canonical	3	828	junction_12	82.7067107313548	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21180426	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.74	chr10	+	6054	15	NNC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	8511	3	intron_retention	FALSE	non_canonical	0	0	junction_5	263.228231846085	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGCAAAAATGTGTTTT	NA	False	NA	15	True	AATAAA	-17	NA	21180467	21244785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220977_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.76	chr10	+	3800	1	Genic_Genomic	ENSMUSG00000019977.17	novel	NA	NA	NA	NA	14862	3510	mono-exon	FALSE	NA	NA	NA	NA	NA	770	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	21186818	21190618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_21186800_21190600
ES.2441.77	chr10	+	2106	13	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	45680	0	-2959	0	3prime_fragment	FALSE	canonical	3	828	junction_9	70.4526535262434	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21217611	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.78	chr10	+	2770	5	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-1307	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	478.769255487443	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21219263	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21221094_21234211_21234303_21234630_21234740_21243540_21243686_21244187
ES.2441.79	chr10	+	819	6	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	49041	13956	402	2323	internal_fragment	FALSE	canonical	3	939	junction_2	55.9270954010666	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTCTATGCGTACACA	NA	False	NA	NA	False	ATTAAA	-21	NA	21220972	21230826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537
ES.2441.80	chr10	+	6305	5	NIC	ENSMUSG00000019977.17	novel	2733	18	NA	NA	-1601	0	intron_retention	FALSE	canonical	3	828	junction_1	92.0991313748398	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21228947	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ES.2441.81	chr10	+	6929	4	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	639	-2	intron_retention	FALSE	canonical	3	828	junction_1	106.116288413545	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATTGCAAAAATGT	NA	False	NA	10	True	AATAAA	-12	NA	21231187	21244780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21234303_21234630_21234740_21240573_21243686_21244187
ES.2441.82	chr10	+	2067	3	NNC	ENSMUSG00000019977.17	novel	641	2	NA	NA	-4482	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	542	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	3335	False	NA	12	True	AATAAA	-14	NA	21238817	21244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21239082_21242477_21243686_21244187
ES.2441.9	chr10	+	1898	13	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	-21	13955	3	2324	5prime_fragment	FALSE	canonical	3	854	junction_4	101.440013746494	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTCTATGCGTACACAT	NA	False	NA	NA	False	ATTAAA	-22	NA	21171910	21230827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537
ES.24410.1	chr4	+	1607	6	FSM	ENSMUSG00000001334.10_ENSMUSG00000087416.2	ENSMUST00000102600.4	2763	6	-108	1264	-108	-1264	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATAAGCCACAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	129030683	129037122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129030957_129032483_129032600_129033135_129033335_129033633_129033724_129035854_129035989_129036327
ES.24410.2	chr4	+	2744	5	ISM	ENSMUSG00000001334.10	ENSMUST00000102600.4	2763	6	252	1294	252	-1294	3prime_fragment	FALSE	canonical	0	0	junction_4	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129031043	129037092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129032600_129033135_129033335_129033633_129033724_129035854_129035989_129036327
ES.24411.1	chr4	+	179	1	Intergenic	novelGene_20056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5255	False	NA	NA	False	NA	NA	NA	129040916	129041095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129040900_129041100
ES.24412.1	chr4	+	176	1	Intergenic	novelGene_20057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACAC	3024	False	NA	NA	False	NA	NA	NA	129061354	129061530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129061400_129061500
ES.24413.1	chr4	+	2544	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	58	307	58	-307	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTTACCTAACCTGGGAT	771	False	NA	89	True	NA	NA	NA	129083610	129113093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.11	chr4	+	5758	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	-13	-361	intron_retention	FALSE	non_canonical	0	0	junction_3	581.926844260519	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCGTGAGCTGCATCA	842	False	NA	35	True	AATAAA	-25	NA	129083681	129113039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535_129092812_129092871_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.12	chr4	+	1496	4	NNC	ENSMUSG00000028811.13	novel	647	3	NA	NA	-7	100114	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	863.960390038545	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATAAATCTT	848	False	NA	NA	False	NA	NA	NA	129083687	129213514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091926_129213363
ES.24413.13	chr4	+	4019	12	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	-5	-371	intron_retention	FALSE	canonical	3	1466	junction_8	130.155469654532	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	850	False	NA	25	True	AATAAA	-15	NA	129083689	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.14	chr4	+	1851	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	-2	-371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	437.599462911951	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	853	False	NA	25	True	AATAAA	-15	NA	129083692	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223_129112386_129112932
ES.24413.16	chr4	+	5790	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	5	-371	intron_retention	FALSE	non_canonical	0	0	junction_3	453.729789877436	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	860	False	NA	25	True	AATAAA	-15	NA	129083699	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.17	chr4	+	4289	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	147	-1527	5	1527	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCACCGCTGTGGCC	860	False	NA	NA	False	AATAAA	-42	NA	129083699	129114927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.18	chr4	+	5831	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	6	-373	intron_retention	FALSE	non_canonical	0	0	junction_3	603.995699947902	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGCACGGAGTCTCG	861	False	NA	23	True	AATAAA	-13	NA	129083700	129113027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108593_129109018_129109213_129110470_129110613_129112223
ES.24413.2	chr4	+	5853	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	68	-371	intron_retention	TRUE	non_canonical	0	0	junction_3	678.970426628941	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	781	False	NA	25	True	AATAAA	-15	NA	129083620	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535_129092812_129092871_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108593_129109018_129109213_129110470_129110613_129112223
ES.24413.20	chr4	+	5180	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	10	-373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	581.926844260519	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGCACGGAGTCTCG	865	False	NA	23	True	AATAAA	-13	NA	129083704	129113027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129092860_129093032_129093504_129093971_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.21	chr4	+	3427	11	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	10	-373	intron_retention	FALSE	canonical	3	1470	junction_10	127.172953099313	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGCACGGAGTCTCG	865	False	NA	23	True	AATAAA	-13	NA	129083704	129113027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129109213_129110470_129110613_129112223
ES.24413.22	chr4	+	5750	9	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	19	-371	intron_retention	FALSE	canonical	0	0	junction_6	550.533136491347	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	874	False	NA	25	True	AATAAA	-15	NA	129083713	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129101827_129103444_129103581_129107741_129107878_129108450_129110613_129112223
ES.24413.23	chr4	+	4808	12	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	19	-374	intron_retention	FALSE	canonical	0	0	junction_3	626.837095106578	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCTGCACGGAGTCTC	874	False	NA	22	True	AATAAA	-12	NA	129083713	129113026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091086_129093840_129093948_129094518_129094649_129099921_129100003_129101733_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.24	chr4	+	2909	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	165	-165	23	165	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCACAAGGTCA	878	False	NA	NA	False	ATTAAA	-19	NA	129083717	129113565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.25	chr4	+	2363	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	28	-371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	454.547821711008	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	883	False	NA	25	True	AATAAA	-15	NA	129083722	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094641_129099918_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.26	chr4	+	2933	12	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	29	-378	intron_retention	FALSE	canonical	3	1470	junction_11	125.590506036928	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTTTCTGCACGGAG	884	False	NA	18	True	AATAAA	-8	NA	129083723	129113022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.27	chr4	+	4558	11	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	30	-370	intron_retention	FALSE	canonical	3	1470	junction_10	130.965682527905	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCACGGAGTCTCGTGA	885	False	NA	26	True	AATAAA	-16	NA	129083724	129113030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.28	chr4	+	2804	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	584.225781110017	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACAGCTTTGTCATG	885	False	NA	NA	False	AAAACA	-44	NA	129083724	129113402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129111100_129111166_129112223
ES.24413.3	chr4	+	2341	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	69	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	451.593313539221	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	782	False	NA	25	True	AATAAA	-15	NA	129083621	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109085_129110470_129110613_129112223
ES.24413.30	chr4	+	5767	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	30	-371	intron_retention	TRUE	non_canonical	0	0	junction_3	453.729789877436	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	885	False	NA	25	True	AATAAA	-15	NA	129083724	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091517_129091552_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.32	chr4	+	4749	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	41	146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	676.909440422088	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGTCCCTGTAATTG	896	False	NA	13	True	AATAGA	-19	NA	129083735	129112602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129092860_129093032_129093504_129093971_129094649_129099921_129100003_129101733_129101827_129103419_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.35	chr4	+	1420	4	NNC	ENSMUSG00000028811.13	novel	647	3	NA	NA	46	857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	863.960390038545	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGGAGCAAGTGGGGTT	901	False	NA	NA	False	NA	NA	NA	129083740	129092091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535
ES.24413.36	chr4	+	1591	8	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	188	8412	46	343	5prime_fragment	FALSE	canonical	3	1488	junction_7	138.160066884873	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATTTATATACATAT	901	False	NA	NA	False	NA	NA	NA	129083740	129104988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285
ES.24413.37	chr4	+	1521	4	NNC	ENSMUSG00000028811.13	novel	647	3	NA	NA	46	958	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	863.960390038545	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	901	False	NA	NA	False	NA	NA	NA	129083740	129092192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535
ES.24413.38	chr4	+	2727	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	189	-7	47	7	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTTTGTCATGTGTCT	902	False	NA	NA	False	AATGAA	-2	NA	129083741	129113407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.39	chr4	+	5612	7	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	48	951	intron_retention	TRUE	non_canonical	0	0	junction_3	801.95261705415	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATATACTGTGTGT	903	False	NA	NA	False	NA	NA	NA	129083742	129103359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535_129092858_129092927_129094649_129099921_129100003_129101733
ES.24413.4	chr4	+	1762	6	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	82	10670	-60	322	5prime_fragment	FALSE	canonical	3	1502	junction_5	142.862171340072	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGGTAGCACACACTA	795	False	NA	NA	False	NA	NA	NA	129083634	129102730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733
ES.24413.41	chr4	+	2300	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	190	419	48	-419	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTAACCGCCACTGT	903	False	NA	-23	True	CATAAA	-12	NA	129083742	129112981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.42	chr4	+	1374	9	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	48	1138	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	548.468036899143	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCAGAGTTGTAGGC	903	False	NA	NA	False	NA	NA	NA	129083742	129105783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129105381
ES.24413.44	chr4	+	2329	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	50	-364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	451.593313539221	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAGTCTCGTGAGCTGCA	905	False	NA	32	True	AATAAA	-22	NA	129083744	129113036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109221_129110502_129110613_129112223
ES.24413.45	chr4	+	7025	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	50	1504	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	581.926844260519	1078	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATAAACGCGTATTCT	905	False	NA	NA	False	AATAAA	-19	NA	129083744	129114904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129092868_129093032_129093504_129093971_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.46	chr4	+	3024	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	50	-371	intron_retention	FALSE	canonical	0	0	junction_3	453.729789877436	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	905	False	NA	25	True	AATAAA	-15	NA	129083744	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129093840_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.47	chr4	+	1199	8	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	194	8798	52	-43	5prime_fragment	FALSE	canonical	3	1488	junction_7	138.160066884873	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGCTCAGGATAGACTC	907	False	NA	NA	False	AATAAA	-16	NA	129083746	129104602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285
ES.24413.48	chr4	+	5149	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	52	-365	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	581.926844260519	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGAGTCTCGTGAGCTGC	907	False	NA	31	True	AATAAA	-21	NA	129083746	129113035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129092830_129092999_129093504_129093971_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.5	chr4	+	2293	7	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	-59	951	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	632.606886006011	1025	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATATACTGTGTGT	796	False	NA	NA	False	NA	NA	NA	129083635	129103359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129101923
ES.24413.50	chr4	+	7260	12	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	53	-371	intron_retention	TRUE	non_canonical	0	0	junction_3	626.890647798737	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	908	False	NA	25	True	AATAAA	-15	NA	129083747	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091516_129091552_129093948_129094518_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129107878_129108450_129109213_129110470_129110613_129112223
ES.24413.53	chr4	+	2335	13	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	57	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	687.583989819102	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	912	False	NA	25	True	AATAAA	-15	NA	129083751	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083877_129090632_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103447_129103581_129104285_129104372_129107741_129107878_129108452_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.55	chr4	+	5823	12	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	76	1514	intron_retention	FALSE	canonical	3	1466	junction_8	130.155469654532	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTATTCTGCTCCCCTCC	931	False	NA	NA	False	AATAAA	-29	NA	129083770	129114914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.56	chr4	+	2914	12	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	87	-364	intron_retention	FALSE	canonical	0	0	junction_6	474.868559456541	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAGTCTCGTGAGCTGCA	942	False	NA	32	True	AATAAA	-22	NA	129083781	129113036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103419_129103581_129104285_129104372_129107741_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.57	chr4	+	1722	6	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	237	10555	95	437	5prime_fragment	FALSE	canonical	3	1502	junction_5	142.862171340072	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAACAAACAAACAAATAA	950	False	NA	NA	False	NA	NA	NA	129083789	129102845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733
ES.24413.58	chr4	+	2191	14	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	103	-371	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_13	435.293806784397	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	958	False	NA	25	True	AATAAA	-15	NA	129083797	129113029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223_129112303_129112404
ES.24413.59	chr4	+	4718	9	NNC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	2340	-369	intron_retention	FALSE	canonical	0	0	junction_6	507.011202415686	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGAGTCTCGTGAG	9310	False	NA	27	True	AATAAA	-17	NA	129093366	129113031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129107878_129108450_129108593_129109018_129109213_129110470_129110613_129112223
ES.24413.6	chr4	+	2207	4	NNC	ENSMUSG00000028811.13	novel	647	3	NA	NA	-22	1576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	863.960390038545	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGGAAGAAAGGAA	833	False	NA	NA	False	NA	NA	NA	129083672	129092810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129083866_129090622_129090770_129090905_129091498_129091535
ES.24413.61	chr4	+	1323	1	Intergenic	novelGene_20061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129121801	129123124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129121800_129123100
ES.24413.62	chr4	+	2884	1	Intergenic	novelGene_20062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGCTGTGCCCTCTAG	NA	False	NA	NA	False	NA	NA	NA	129127789	129130673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129127800_129130700
ES.24413.63	chr4	+	670	1	Intergenic	novelGene_20064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8710	False	NA	NA	False	NA	NA	NA	129145670	129146340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129145700_129146300
ES.24413.64	chr4	+	2107	4	NNC	ENSMUSG00000087575.8	novel	412	2	NA	NA	-9257	30	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAGTTAGAATCACACC	9540	False	NA	NA	False	NA	NA	NA	129146500	129158833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129146584_129153889_129154064_129155723_129155906_129157165
ES.24413.65	chr4	+	179	1	Intergenic	novelGene_20066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCAATACT	NA	False	NA	NA	False	NA	NA	NA	129156425	129156604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129156400_129156600
ES.24413.66	chr4	+	227	1	Intergenic	novelGene_20067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129172917	129173144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129172900_129173100
ES.24413.67	chr4	+	2750	5	FSM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	116	-824	102	824	multi-exon	FALSE	canonical	1	1	junction_1	3.8405728739343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTCTATTATGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	129181525	129203176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129200420_129200498_129201834
ES.24413.68	chr4	+	2749	3	NIC	ENSMUSG00000001333.10	novel	2042	5	NA	NA	5464	824	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTCTATTATGTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	129186887	129203176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129188170_129200134_129200260_129201834
ES.24413.69	chr4	+	3883	5	NNC	ENSMUSG00000001333.10	novel	2042	5	NA	NA	5507	2071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.14578098794425	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCAATTTTTCGTTTT	NA	False	NA	NA	False	GATAAA	-29	NA	129186930	129204423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129188170_129200134_129200260_129200420_129200498_129201834_129203646_129203792
ES.24413.7	chr4	+	2008	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	124	777	-18	167	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTGGTTCCCAAGT	837	False	NA	34	True	AATAGA	-40	NA	129083676	129112623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ES.24413.71	chr4	+	177	1	Intergenic	novelGene_20070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	617	False	NA	NA	False	NA	NA	NA	129213357	129213534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129213400_129213500
ES.24413.72	chr4	+	159	2	Intergenic	novelGene_20071	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	617	False	NA	NA	False	NA	NA	NA	129213357	129314455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129213484_129314422
ES.24413.73	chr4	+	3220	2	Antisense	novelGene_ENSMUSG00000057236.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTTCATAATTTGTAAGA	852	False	NA	NA	False	NA	NA	NA	129213592	129216910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129215774_129215871
ES.24413.74	chr4	+	216	1	Intergenic	novelGene_20072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGAGCTCACCAATTA	NA	False	NA	NA	False	AAAAAG	-19	NA	129222770	129222986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129222800_129223000
ES.24413.75	chr4	+	4044	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-185	-26	-185	26	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTGTTTCTGTGGT	NA	False	NA	NA	False	ATTAAA	-45	NA	129229302	129243690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.76	chr4	+	1283	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-173	2723	-173	115	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGCCATTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	129229314	129240941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.77	chr4	+	2789	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	-84	1128	-84	-1128	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTGCGGTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	129229403	129242536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.78	chr4	+	5664	6	NIC	ENSMUSG00000057572.16	novel	618	6	NA	NA	-81	0	intron_retention	FALSE	canonical	3	561	junction_3	62.6597159265824	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229406	129240826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.79	chr4	+	706	7	NNC	ENSMUSG00000057572.16	novel	3833	7	NA	NA	-4	94	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	238.614053791194	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTTGTTTGTTTTTT	NA	False	NA	111	True	NA	NA	NA	129229483	129240920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129229546_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.80	chr4	+	2192	6	FSM	ENSMUSG00000057572.16	ENSMUST00000106047.4	618	6	-92	-1482	-57	-1356	multi-exon	FALSE	canonical	3	22	junction_1	246.415421595321	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGACTCTCCTGGACT	NA	False	NA	NA	False	NA	NA	NA	129229747	129242308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.81	chr4	+	4997	6	NNC	ENSMUSG00000057572.16	novel	3833	7	NA	NA	-17	-5	intron_retention	FALSE	canonical	2	5	junction_1	253.013517425453	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCAGTGTGTAGCAGT	NA	False	NA	12	True	TTTAAA	-19	NA	129229787	129240821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129233516_129234520_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.82	chr4	+	673	7	NNC	ENSMUSG00000057572.16	novel	3833	7	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	244.423641791596	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGTGTAGCAGTG	NA	False	NA	13	True	TTTAAA	-20	NA	129229798	129240822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240603
ES.24413.83	chr4	+	652	6	FSM	ENSMUSG00000057572.16	ENSMUST00000106047.4	618	6	-41	7	-6	-7	multi-exon	FALSE	canonical	3	22	junction_1	246.415421595321	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACCAGTGTGTAGCA	NA	False	NA	10	True	TTTAAA	-17	NA	129229798	129240819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.84	chr4	+	667	6	NNC	ENSMUSG00000057572.16	novel	618	6	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.956153093037	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGTGTAGCAGTG	NA	False	NA	13	True	TTTAAA	-20	NA	129229802	129240822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129229949_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.85	chr4	+	1899	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	318	1616	1	1222	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGACATGTAATTTTAT	NA	False	NA	NA	False	NA	NA	NA	129229805	129242048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.86	chr4	+	6549	5	NIC	ENSMUSG00000057572.16	novel	618	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	571	junction_4	59.3438075960753	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229818	129240826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129234546_129235269_129235392_129235533_129236967_129238004_129238042_129240596
ES.24413.87	chr4	+	658	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	333	2842	16	-4	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGTGTAGCAGTG	NA	False	NA	13	True	TTTAAA	-20	NA	129229820	129240822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.88	chr4	+	1544	6	NNC	ENSMUSG00000057572.16	novel	618	6	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	254.956153093037	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCAGTGTGTAGCAGT	NA	False	NA	12	True	TTTAAA	-19	NA	129229836	129240821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129230360_129234768_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ES.24413.89	chr4	+	159	2	Intergenic	novelGene_20074	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129230436	129281601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129230507_129281512
ES.24413.9	chr4	+	2344	6	ISM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	129	10041	-13	951	5prime_fragment	FALSE	canonical	3	1502	junction_5	142.862171340072	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATATACTGTGTGT	842	False	NA	NA	False	NA	NA	NA	129083681	129103359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733
ES.24413.90	chr4	+	177	1	Intergenic	novelGene_20076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	129250520	129250697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129250500_129250700
ES.24413.91	chr4	+	179	2	Intergenic	novelGene_20077	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAATG	NA	False	NA	NA	False	NA	NA	NA	129250522	129279148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129250647_129279093
ES.24413.92	chr4	+	177	1	Intergenic	novelGene_20078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4868	False	NA	NA	False	NA	NA	NA	129260485	129260662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129260500_129260700
ES.24413.93	chr4	+	3170	1	Antisense	novelGene_ENSMUSG00000028807.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTTCTCTTCTG	NA	False	NA	NA	False	TATAAA	-11	NA	129269076	129272246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129269100_129272200
ES.24413.94	chr4	+	1688	2	Antisense	novelGene_ENSMUSG00000028807.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTTCTCTTCTG	NA	False	NA	NA	False	TATAAA	-11	NA	129269134	129272246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129269298_129270721
ES.24413.95	chr4	+	4732	1	FSM	ENSMUSG00000082468.2	ENSMUST00000118912.2	336	1	-1332	-3064	-1332	3064	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGGAGGAGCTTA	NA	False	NA	NA	False	AAAAAG	-9	NA	129272304	129277036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129272300_129277000
ES.24413.96	chr4	+	177	1	Intergenic	novelGene_20079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	129273132	129273309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129273100_129273300
ES.24413.97	chr4	+	5434	3	Intergenic	novelGene_20080	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATATGTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	129276218	129292515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129276733_129286836_129287020_129287778
ES.24413.98	chr4	+	210	1	Intergenic	novelGene_20088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAGGTTGTATTTTAC	NA	False	NA	NA	False	AATAAA	-11	NA	129298672	129298882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129298700_129298900
ES.24413.99	chr4	+	158	1	Intergenic	novelGene_20092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	1721	False	NA	NA	False	NA	NA	NA	129314297	129314455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129314300_129314500
ES.24414.1	chr4	-	218	1	Intergenic	novelGene_20051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAACACAGCAAAGCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	128964218	128964000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128964000_128964200
ES.24414.11	chr4	-	4265	6	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	3	3	intron_retention	FALSE	canonical	2	7	junction_5	75.8762149820351	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1235	False	NA	-2	True	AATAAA	-18	NA	129083288	129041794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083164
ES.24414.12	chr4	-	4010	9	FSM	ENSMUSG00000040928.16	ENSMUST00000106059.8	4084	9	77	-3	20	3	multi-exon	FALSE	canonical	3	25	junction_6	66.0793793478722	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1080	False	NA	-2	True	AATAAA	-18	NA	129083443	129041794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
ES.24414.13	chr4	-	4448	7	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_5	73.1634395643677	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1111	False	NA	-2	True	AATAAA	-18	NA	129083412	129041794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077281_129077511_129083334
ES.24414.14	chr4	-	3711	8	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.3370269183624	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTACTGTGGCCGTCTGT	1152	False	NA	-2	True	AATAAA	-18	NA	129083371	129041794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075785_129075894_129077393_129077511_129083334
ES.24414.15	chr4	-	5800	6	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	3	2	intron_retention	FALSE	canonical	3	119	junction_5	29.1986301048525	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1116	False	NA	-3	True	AATAAA	-17	NA	129083407	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129076326_129077393_129077511_129083334
ES.24414.16	chr4	-	4094	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	-33	-2	-3	2	multi-exon	FALSE	canonical	3	18	junction_6	67.6456761367643	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1118	False	NA	-3	True	AATAAA	-17	NA	129083405	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
ES.24414.18	chr4	-	10790	2	NNC	ENSMUSG00000040928.16	novel	666	3	NA	NA	19327	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	5864	False	NA	-3	True	AATAAA	-17	NA	129052774	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129047585_129047773
ES.24414.19	chr4	-	5454	8	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_5	65.3527320916022	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1105	False	NA	-3	True	AATAAA	-17	NA	129083418	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
ES.24414.2	chr4	-	154	2	Intergenic	novelGene_20052	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	129065783	128964043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128964059_129065644
ES.24414.20	chr4	-	4126	5	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	-2	2	intron_retention	FALSE	canonical	1	1	junction_2	87.2711292467331	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1111	False	NA	-3	True	AATAAA	-17	NA	129083412	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129073981_129074065_129075534_129076326_129083334
ES.24414.21	chr4	-	3663	7	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	82.2469182131194	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1108	False	NA	-3	True	AATAAA	-17	NA	129083415	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129083334
ES.24414.22	chr4	-	4244	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	16	2	intron_retention	FALSE	canonical	3	49	junction_5	52.6272995037863	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTACTGTGGCCGTCTG	1076	False	NA	-3	True	AATAAA	-17	NA	129083447	129041795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083334
ES.24414.24	chr4	-	3252	3	FSM	ENSMUSG00000040928.16	ENSMUST00000148920.8	666	3	-43	-2543	-3	1	multi-exon	FALSE	canonical	0	0	junction_2	92.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1110	False	NA	-4	True	AATAAA	-16	NA	129083413	129041796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129044885_129049217_129049303_129083334
ES.24414.27	chr4	-	4126	7	FSM	ENSMUSG00000040928.16	ENSMUST00000117497.8	1053	7	-45	-3028	16	1	multi-exon	FALSE	canonical	3	49	junction_5	68.8226383943216	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1076	False	NA	-4	True	AATAAA	-16	NA	129083447	129041796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129083334
ES.24414.28	chr4	-	4366	7	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	6	junction_6	69.6291765154681	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1097	False	NA	-4	True	AATAAA	-16	NA	129083426	129041796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083316
ES.24414.29	chr4	-	4224	8	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_7	76.4156197303634	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1119	False	NA	-4	True	AATAAA	-16	NA	129083404	129041796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083310
ES.24414.3	chr4	-	2580	1	Antisense	novelGene_ENSMUSG00000028793.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAGCAACATAGCAGAT	NA	False	NA	NA	False	NA	NA	NA	128968508	128965928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_128965900_128968500
ES.24414.30	chr4	-	4332	7	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-14	1	intron_retention	FALSE	canonical	0	0	junction_6	71.8091606660011	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCCGTCT	1137	False	NA	-4	True	AATAAA	-16	NA	129083386	129041796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083310
ES.24414.32	chr4	-	4345	8	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-12022	0	intron_retention	FALSE	non_canonical	0	0	junction_7	79.5171653911074	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	NA	False	NA	-5	True	AATAAA	-15	NA	129095542	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164_129083238_129095525
ES.24414.33	chr4	-	3996	7	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_5	74.8546740172063	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1100	False	NA	-5	True	AATAAA	-15	NA	129083423	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075894_129076124_129076326_129083334
ES.24414.34	chr4	-	3985	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	78.1544781121312	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1108	False	NA	-5	True	AATAAA	-15	NA	129083415	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129083334
ES.24414.35	chr4	-	3818	8	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	76.7620229232223	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1152	False	NA	-5	True	AATAAA	-15	NA	129083371	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129083334
ES.24414.36	chr4	-	3301	3	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-2	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	92.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1230	False	NA	-5	True	AATAAA	-15	NA	129083293	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129083164
ES.24414.37	chr4	-	5720	5	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	17	0	intron_retention	FALSE	canonical	3	52	junction_4	60.6521846267717	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1077	False	NA	-5	True	AATAAA	-15	NA	129083446	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129076326_129083334
ES.24414.38	chr4	-	3954	8	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	86.6729720364581	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1157	False	NA	-5	True	AATAAA	-15	NA	129083366	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129083316
ES.24414.39	chr4	-	4251	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	32	junction_7	68.3591953714841	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1237	False	NA	-5	True	AATAAA	-15	NA	129083286	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083164
ES.24414.4	chr4	-	178	1	Intergenic	novelGene_20053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128995772	128995594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_128995600_128995800
ES.24414.40	chr4	-	4229	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	18	junction_5	62.0907827791086	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1107	False	NA	-5	True	AATAAA	-15	NA	129083416	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075894_129076001_129076326_129077393_129077511_129083334
ES.24414.41	chr4	-	4289	7	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_5	91.1404593653847	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1141	False	NA	-5	True	AATAAA	-15	NA	129083382	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076294_129077393_129077511_129083316
ES.24414.42	chr4	-	5566	7	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	25	junction_4	60.3213616115109	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1117	False	NA	-5	True	AATAAA	-15	NA	129083406	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129075894_129076124_129076326_129077393_129077511_129083334
ES.24414.43	chr4	-	4109	9	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	81.1602388796386	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1119	False	NA	-5	True	AATAAA	-15	NA	129083404	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083316
ES.24414.44	chr4	-	4225	6	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_5	77.8665525113318	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1120	False	NA	-5	True	AATAAA	-15	NA	129083403	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083316
ES.24414.45	chr4	-	3956	9	NNC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.2344199243991	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1257	False	NA	-5	True	AATAAA	-15	NA	129083266	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074042_129075530_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083189
ES.24414.46	chr4	-	4265	6	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	25	0	intron_retention	FALSE	canonical	1	1	junction_2	83.8870669412157	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1257	False	NA	-5	True	AATAAA	-15	NA	129083266	129041797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129073981_129074065_129075534_129076326_129077393_129077511_129083164
ES.24414.47	chr4	-	4344	7	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	84	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	80.2945964696394	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTACTGTGGCCG	1316	False	NA	-7	True	AATAAA	-13	NA	129083207	129041799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074113_129075534_129076326_129077393_129077511_129083164
ES.24414.48	chr4	-	4058	9	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	75.4084710095623	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTACTGTGGCCG	1197	False	NA	-7	True	AATAAA	-13	NA	129083326	129041799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083164
ES.24414.49	chr4	-	4240	6	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	1	1	junction_2	72.8285658241325	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTACTGTGGCCG	1110	False	NA	-7	True	AATAAA	-13	NA	129083413	129041799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ES.24414.5	chr4	-	1442	3	FSM	ENSMUSG00000028785.14	ENSMUST00000095807.10	1666	3	217	7	217	-1	multi-exon	FALSE	canonical	2	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTACTCGGTGGCCAGG	NA	False	NA	-7	True	AATAAA	-15	NA	129012543	129005369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129006319_129006467_129006574_129012156
ES.24414.50	chr4	-	3995	9	NNC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	80.0140612642553	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTACTGTGGCCG	1108	False	NA	-7	True	AATAAA	-13	NA	129083415	129041799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083316
ES.24414.51	chr4	-	4104	8	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	3	-2	intron_retention	FALSE	canonical	3	25	junction_5	59.9128618946563	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTACTGTGGCCG	1107	False	NA	-7	True	AATAAA	-13	NA	129083416	129041799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075894_129076124_129076326_129077393_129077511_129083334
ES.24414.52	chr4	-	4366	7	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	68.8026566024565	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATATGTACTGTGGC	1122	False	NA	-9	True	AATAAA	-11	NA	129083401	129041801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074113_129075534_129076326_129077393_129077511_129083334
ES.24414.53	chr4	-	4175	8	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	6	junction_7	74.8435102090232	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCAGTGGCATATGTACT	1152	False	NA	-14	True	AATAAA	-6	NA	129083371	129041806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083316
ES.24414.54	chr4	-	4917	7	NNC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	25	-12	intron_retention	FALSE	canonical	0	0	junction_5	92.5342279015356	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGTCAGTGGCATATGT	1257	False	NA	-17	True	AATAAA	-3	NA	129083266	129041809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129080830_129081520_129083164
ES.24414.55	chr4	-	4103	9	NNC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	19	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	83.227756037274	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATAAAAGTTCTC	1251	False	NA	-32	True	NA	NA	NA	129083272	129041824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072127_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083164
ES.24414.56	chr4	-	2907	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	32	junction_7	68.3591953714841	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTGGACTGAAAAAGT	1213	False	NA	NA	False	NA	NA	NA	129083310	129043165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083164
ES.24414.57	chr4	-	2137	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	20	315	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTCTGTGGTCTTGTGA	1080	False	NA	NA	False	NA	NA	NA	129083443	129044024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ES.24414.58	chr4	-	1645	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	-13	113	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTTGTTGTTGTTGC	1091	False	NA	NA	False	NA	NA	NA	129083432	129044505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ES.24414.59	chr4	-	1520	7	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTCTTGAATTTTTG	1104	False	NA	NA	False	TTTAAA	-27	NA	129083419	129044617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ES.24414.6	chr4	-	4260	6	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	16	9	intron_retention	FALSE	canonical	3	52	junction_5	57.9931030382062	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCCGTCTGTTCCGGG	1076	False	NA	4	True	AATAAA	-24	NA	129083447	129041788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083334
ES.24414.60	chr4	-	1179	9	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	75.4084710095623	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTGTCTTGAATTTTT	1257	False	NA	NA	False	TTTAAA	-26	NA	129083266	129044618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083164
ES.24414.61	chr4	-	1244	7	NNC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_5	81.7076427813757	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTACTGTCTTGAATTT	1108	False	NA	NA	False	TTTAAA	-24	NA	129083415	129044620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075785_129076326_129083334
ES.24414.62	chr4	-	1379	6	NIC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	52	junction_5	57.9931030382062	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCATTACTGTCTTG	1120	False	NA	NA	False	TTTAAA	-19	NA	129083403	129044625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083334
ES.24414.63	chr4	-	3772	1	NIC	ENSMUSG00000040928.16	novel	2795	7	NA	NA	11109	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTCTATCTTTCTATT	NA	False	NA	NA	False	AATAAA	-19	NA	129060992	129057220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129057200_129061000
ES.24414.64	chr4	-	2163	6	NNC	ENSMUSG00000040928.16	novel	2241	5	NA	NA	102	1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.5835199120017	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTATAAGCCTTTTAT	8302	False	NA	NA	False	NA	NA	NA	129076221	129060911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129062447_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001
ES.24414.65	chr4	-	138	1	Intergenic	novelGene_20058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	129065783	129065645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129065600_129065800
ES.24414.66	chr4	-	4037	1	Intergenic	novelGene_20059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCTATAAAAGAAGCCAA	2111	False	NA	NA	False	NA	NA	NA	129082412	129078375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129078400_129082400
ES.24414.67	chr4	-	179	1	Intergenic	novelGene_20060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAGATAATTA	NA	False	NA	NA	False	NA	NA	NA	129086801	129086622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129086600_129086800
ES.24414.7	chr4	-	4475	7	NIC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	-29	5	intron_retention	FALSE	canonical	3	119	junction_6	30.1482448355898	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGGCCGTCTGTTC	974	False	NA	0	True	AATAAA	-20	NA	129083549	129041792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083334
ES.24414.8	chr4	-	4166	8	NNC	ENSMUSG00000040928.16	novel	4084	9	NA	NA	1	5	intron_retention	FALSE	canonical	0	0	junction_6	93.285823670905	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGGCCGTCTGTTC	1189	False	NA	0	True	AATAAA	-20	NA	129083334	129041792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075894_129076124_129076326_129080830_129080915_129083164
ES.24414.9	chr4	-	4109	7	NNC	ENSMUSG00000040928.16	novel	1053	7	NA	NA	1	4	intron_retention	FALSE	canonical	1	2	junction_6	81.6863921756045	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTGGCCGTCTGTT	1114	False	NA	-1	True	AATAAA	-19	NA	129083409	129041793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129083316
ES.24415.1	chr4	-	5596	8	NNC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	115.259777574532	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGCTGTTTTCCAG	NA	False	NA	1	True	ATTAAA	-29	NA	129133015	129113369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129125845_129126360_129132798
ES.24415.10	chr4	-	4917	7	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	94.222549789787	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	455	False	NA	0	True	ATTAAA	-28	NA	129121624	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121571
ES.24415.11	chr4	-	3687	1	NIC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	4214	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	5020	False	NA	-2	True	ATTAAA	-26	NA	129117059	129113372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129113400_129117100
ES.24415.12	chr4	-	5042	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	5	2	5	-2	multi-exon	FALSE	canonical	3	23	junction_6	86.8210164009204	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	17	True	NA	-2	True	ATTAAA	-26	NA	129121699	129113372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ES.24415.13	chr4	-	5256	7	NNC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.3998893546994	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	NA	False	NA	-2	True	ATTAAA	-26	NA	129142234	129113372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119339_129119499_129119556_129119635_129119807_129141913
ES.24415.14	chr4	-	5095	7	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	649	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.3334790208677	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTGACTGCTGTTTTC	1455	False	NA	-2	True	ATTAAA	-26	NA	129120624	129113372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129120391
ES.24415.15	chr4	-	5192	7	NNC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.0432650019044	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTGACTGCTGTTT	NA	False	NA	-4	True	ATTAAA	-24	NA	129142256	129113374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115618_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.16	chr4	-	2466	4	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	102.112138793039	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTGACTGCTGTTT	NA	False	NA	-4	True	ATTAAA	-24	NA	129142256	129113374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129119499_129119556_129119635_129119807_129141913
ES.24415.17	chr4	-	5912	6	NIC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-43	-4	intron_retention	FALSE	canonical	3	123	junction_5	52.1252338124252	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTGACTGCTGTTT	NA	False	NA	-4	True	ATTAAA	-24	NA	129133010	129113374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129118190_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.18	chr4	-	5318	7	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	-3588	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	92.371382052139	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	False	NA	-7	True	ATTAAA	-21	NA	129125292	129113377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129124831
ES.24415.19	chr4	-	6227	3	NIC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	50	-7	intron_retention	FALSE	canonical	3	23	junction_2	119.5	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	0	True	NA	-7	True	ATTAAA	-21	NA	129121654	129113377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129119807_129121519
ES.24415.2	chr4	-	5373	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-185	-1	-185	1	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGACTGCTGTTTTCCAG	NA	False	NA	1	True	ATTAAA	-29	NA	129142421	129113369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.21	chr4	-	5309	6	NIC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-49	-7	intron_retention	FALSE	canonical	3	123	junction_5	53.2428398942055	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	False	NA	-7	True	ATTAAA	-21	NA	129133016	129113377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119556_129119635_129119807_129132798
ES.24415.22	chr4	-	4702	8	NNC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	123	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.575681473689	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGGCTGTGACTGC	NA	False	NA	-9	True	ATTAAA	-19	NA	129132844	129113379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129114494_129114692_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.23	chr4	-	4679	6	NNC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-43	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.310406058635	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACTTGGCTGTGACTG	NA	False	NA	-10	True	ATTAAA	-18	NA	129133010	129113380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129117837_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.24	chr4	-	5189	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-68	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	100.817855561403	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACTTGGCTGTGACTG	NA	False	NA	-10	True	ATTAAA	-18	NA	129142304	129113380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119635_129119807_129141913
ES.24415.25	chr4	-	5908	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	103	-16	intron_retention	FALSE	canonical	3	145	junction_5	43.5127567501761	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTGAAACTTGGCTG	NA	False	NA	-16	True	ATTAAA	-12	NA	129142133	129113386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129118190_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.28	chr4	-	4962	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-48	119	-48	-119	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGATATGTCTCTAT	NA	False	NA	4	True	CATAAA	-44	NA	129133015	129113489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.29	chr4	-	5191	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-46	-123	intron_retention	FALSE	canonical	3	145	junction_5	46.0764581972182	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCTTTGATATGTCT	NA	False	NA	0	True	CATAAA	-40	NA	129142282	129113493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.3	chr4	-	5110	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-77	0	-77	0	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129133044	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.30	chr4	-	5133	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-70	124	-70	-124	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTCTTTGATATGTC	NA	False	NA	-1	True	CATAAA	-39	NA	129142306	129113494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.31	chr4	-	6466	8	NNC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-40	-124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	113.479657441593	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTCTTTGATATGTC	NA	False	NA	-1	True	CATAAA	-39	NA	129133007	129113494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129124831_129126349_129132798
ES.24415.32	chr4	-	4885	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	39	125	39	-125	multi-exon	FALSE	canonical	3	23	junction_6	86.8210164009204	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTCTTTGATATGT	414	False	NA	-2	True	CATAAA	-38	NA	129121665	129113495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ES.24415.33	chr4	-	4661	8	NNC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-5	-125	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	91.307509135283	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTCTTTGATATGT	NA	False	NA	-2	True	CATAAA	-38	NA	129142241	129113495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129114688_129115093_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.34	chr4	-	5143	7	NNC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-68	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.6268405716379	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTCTTTGATATG	NA	False	NA	-3	True	CATAAA	-37	NA	129142304	129113496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118176_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.35	chr4	-	4870	7	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	39	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.3334790208677	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTGAGTCTTTGATAT	414	False	NA	-4	True	CATAAA	-36	NA	129121665	129113497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121532
ES.24415.36	chr4	-	5114	8	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	-3746	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.479657441593	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTGAGTCTTTGATAT	NA	False	NA	-4	True	CATAAA	-36	NA	129125450	129113497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129124831_129125157_129125398
ES.24415.37	chr4	-	6104	4	NIC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-49	-133	intron_retention	FALSE	canonical	3	123	junction_3	62.686167178697	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTACTTTGAGTCTT	NA	False	NA	-10	True	CATAAA	-30	NA	129133016	129113503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129119556_129119635_129119807_129132798
ES.24415.38	chr4	-	4977	7	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	633	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.3334790208677	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCCTTACTTTGAGT	1439	False	NA	-13	True	CATAAA	-27	NA	129120640	129113506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129120391
ES.24415.39	chr4	-	5332	5	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	23	-147	intron_retention	FALSE	canonical	3	145	junction_4	49.9418411755113	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATCTATATTTCC	NA	False	NA	-24	True	CATAAA	-16	NA	129142213	129113517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118305_129119144_129119556_129119635_129119807_129141913
ES.24415.4	chr4	-	5163	6	NIC	ENSMUSG00000050390.13	novel	5033	7	NA	NA	-49	0	intron_retention	FALSE	canonical	3	123	junction_5	54.8160560420029	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129133016	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.40	chr4	-	3786	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-78	1479	-78	-1479	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGTCCATCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	129142314	129114849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.41	chr4	-	3577	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	-22	1494	-22	-1494	multi-exon	FALSE	canonical	3	23	junction_6	86.8210164009204	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCAAAGTGGCTGC	-10	True	NA	NA	False	NA	NA	NA	129121726	129114864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ES.24415.42	chr4	-	3547	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-44	1530	-44	-1530	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGAATCATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	129133011	129114900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.43	chr4	-	3268	6	ISM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	39	2079	39	-2079	5prime_fragment	FALSE	canonical	3	23	junction_5	92.3592983949099	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTATCTCACTTAGGTT	414	False	NA	NA	False	AATAAA	-20	NA	129121665	129115449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ES.24415.44	chr4	-	3339	6	ISM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	-50	2081	-50	-2081	5prime_fragment	FALSE	canonical	3	123	junction_5	52.8605713173817	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTATCTCACTTAGG	NA	False	NA	NA	False	AATAAA	-18	NA	129133017	129115451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ES.24415.45	chr4	-	3493	6	ISM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	-50	2081	-50	-2081	5prime_fragment	FALSE	canonical	3	145	junction_5	44.2917599560008	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTATCTCACTTAGG	NA	False	NA	NA	False	AATAAA	-18	NA	129142286	129115451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.46	chr4	-	1607	1	Intergenic	novelGene_20063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	129136447	129134840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129134800_129136400
ES.24415.5	chr4	-	5314	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-46	0	intron_retention	FALSE	canonical	3	145	junction_5	46.0764581972182	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142282	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.6	chr4	-	5119	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.297581412391	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142282	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ES.24415.8	chr4	-	3542	3	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	2	True	NA	0	True	ATTAAA	-28	NA	129121652	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129115271_129115607_129117117_129121519
ES.24415.9	chr4	-	5491	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	-70	0	intron_retention	FALSE	canonical	3	145	junction_5	44.6882534901511	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142306	129113370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119556_129119635_129119807_129141913
ES.24416.1	chr4	-	182	1	Intergenic	novelGene_20065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	129149792	129149610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129149600_129149800
ES.24417.1	chr4	-	173	2	Antisense	novelGene_ENSMUSG00000001333.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAATCT	NA	False	NA	NA	False	NA	NA	NA	129194189	129183014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_129183030_129194031
ES.24417.10	chr4	-	2088	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	30	2289	30	128	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAACCATAGATAAAAGAG	2522	False	NA	99	True	AATAAA	-12	NA	129229133	129203181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.11	chr4	-	1699	12	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	11	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.162062349697	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	2503	False	NA	-22	True	AATAAA	-21	NA	129229152	129203302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203674_129211450_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.13	chr4	-	1986	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	11	2410	11	7	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	2503	False	NA	-22	True	AATAAA	-21	NA	129229152	129203302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.14	chr4	-	887	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-5	7	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	10011	False	NA	-22	True	AATAAA	-21	NA	129229168	129203302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.15	chr4	-	1802	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	21	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	2513	False	NA	-22	True	AATAAA	-21	NA	129229142	129203302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203843_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.16	chr4	-	1059	7	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	11773	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.127471256764	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGGTTTTATTTA	6586	False	NA	-22	True	AATAAA	-21	NA	129216664	129203302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129212279_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488
ES.24417.18	chr4	-	1351	8	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	365.178904994608	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGCTGGTGGGTTTTA	2521	False	NA	-26	True	AATAAA	-17	NA	129229134	129203306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129215654_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.19	chr4	-	6565	4	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	30	2	intron_retention	FALSE	canonical	3	143	junction_1	457.997816588682	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2522	False	NA	-27	True	AATAAA	-16	NA	129229133	129203307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129216594_129222527_129228289_129228438_129229010
ES.24417.2	chr4	-	4228	12	NNC	ENSMUSG00000057236.11	novel	392	3	NA	NA	-47	16028	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	304.747910995627	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAATGTATATTCTTTT	2566	False	NA	NA	False	AATAAA	-22	NA	129229089	129184864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129187818_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.20	chr4	-	4806	9	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	22	2	intron_retention	TRUE	non_canonical	0	0	junction_1	424.43668550209	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGCTGGTGGGTTTT	2514	False	NA	-27	True	AATAAA	-16	NA	129229141	129203307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129211984_129213347_129213567_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.22	chr4	-	1743	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-33	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	9983	False	NA	-28	True	AATAAA	-15	NA	129229196	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.25	chr4	-	3522	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	351.340251355039	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2514	False	NA	-28	True	AATAAA	-15	NA	129229141	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203843_129203951_129211440_129211552_129211654_129211713_129212236_129213347_129213567_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.26	chr4	-	2573	5	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	14218	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	254.776740500384	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	9031	False	NA	-28	True	AATAAA	-15	NA	129214219	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129213347_129213567
ES.24417.27	chr4	-	1022	6	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	53	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	430.118402303366	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2545	False	NA	-28	True	AATAAA	-15	NA	129229110	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203679_129216177_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.28	chr4	-	1297	8	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	21	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	365.178904994608	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2513	False	NA	-28	True	AATAAA	-15	NA	129229142	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203665_129215709_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.29	chr4	-	3489	10	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.980375419276	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2523	False	NA	-28	True	AATAAA	-15	NA	129229132	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129211984_129213347_129213567_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.3	chr4	-	3533	12	NNC	ENSMUSG00000057236.11	novel	392	3	NA	NA	52	15311	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	304.747910995627	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGCCTGAGTGTGGG	2544	False	NA	NA	False	NA	NA	NA	129229111	129185581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129187818_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.31	chr4	-	3397	12	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	363.861975466086	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2532	False	NA	-28	True	AATAAA	-15	NA	129229123	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129213347_129213567_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.32	chr4	-	1883	11	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	319.46425465144	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2522	False	NA	-28	True	AATAAA	-15	NA	129229133	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.33	chr4	-	1742	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.671860066294	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2520	False	NA	-28	True	AATAAA	-15	NA	129229135	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129225654_129225715_129228289_129228438_129229010
ES.24417.35	chr4	-	1824	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2522	False	NA	-28	True	AATAAA	-15	NA	129229133	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203673_129203809_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.37	chr4	-	3548	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	351.340251355039	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2523	False	NA	-28	True	AATAAA	-15	NA	129229132	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203808_129203951_129211440_129211552_129211654_129211713_129212236_129213347_129213567_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.38	chr4	-	1718	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2512	False	NA	-28	True	AATAAA	-15	NA	129229143	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203922_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.39	chr4	-	1955	12	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.162062349697	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGCTGGTGGGTTT	2523	False	NA	-28	True	AATAAA	-15	NA	129229132	129203308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203942_129211436_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.4	chr4	-	176	1	Intergenic	novelGene_20068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGCAGCACAGA	NA	False	NA	NA	False	NA	NA	NA	129194190	129194014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129194000_129194200
ES.24417.41	chr4	-	1701	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	295.245378174381	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCCCATGCTGGTGGGT	2623	False	NA	-30	True	AATAAA	-13	NA	129229032	129203310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203660_129203816_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.42	chr4	-	1541	12	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	40	-122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.162062349697	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTGACCACTATAGTT	2532	False	NA	4	True	ATTAAA	-35	NA	129229123	129203431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203674_129211450_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.44	chr4	-	1508	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-57	-137	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTAGGGGTTAGTCT	2556	False	NA	-11	True	ATTAAA	-20	NA	129229099	129203446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.46	chr4	-	1844	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	2	2561	2	-144	multi-exon	FALSE	canonical	3	482	junction_1	226.647613038099	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTTTAGGGG	2494	False	NA	-18	True	ATTAAA	-13	NA	129229161	129203453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.47	chr4	-	1632	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	40	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTTTAGGGG	2532	False	NA	-18	True	ATTAAA	-13	NA	129229123	129203453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203843_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.48	chr4	-	687	5	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	44	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	474.874983548302	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTTTAGGGG	2536	False	NA	-18	True	ATTAAA	-13	NA	129229119	129203453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203666_129216590_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.49	chr4	-	1275	4	NNC	ENSMUSG00000057236.11	novel	722	4	NA	NA	-59	-144	intron_retention	FALSE	non_canonical	0	0	junction_1	553.900311929462	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTTTAGGGG	2554	False	NA	-18	True	ATTAAA	-13	NA	129229101	129203453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203672_129216594_129216663_129222349_129222527_129228289
ES.24417.5	chr4	-	3259	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	42	9	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTTTGAGTGAATGTT	2534	False	NA	1	True	AATAAA	-16	NA	129229121	129200883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.51	chr4	-	4386	1	Intergenic	novelGene_20069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	129210435	129206049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129206000_129210400
ES.24417.52	chr4	-	2491	2	Genic_Genomic	ENSMUSG00000057236.11	novel	4407	12	NA	NA	12812	5703	multi-exon	FALSE	non_canonical	0	0	junction_1	0	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7625	False	NA	NA	False	NA	NA	NA	129215625	129212913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_129213347_129213567
ES.24417.53	chr4	-	4224	3	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	-2	17713	-2	11	5prime_fragment	FALSE	canonical	3	1040	junction_2	67.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAAAGAATTTTTTTACT	2490	False	NA	NA	False	NA	NA	NA	129229165	129218605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129222527_129228289_129228438_129229010
ES.24417.54	chr4	-	170	1	Intergenic	novelGene_20073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAGAATGA	4441	False	NA	NA	False	NA	NA	NA	129227214	129227044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129227000_129227200
ES.24417.6	chr4	-	4433	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	-18	-8	-18	8	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTTTGAGTGAATGT	9998	False	NA	0	True	AATAAA	-15	NA	129229181	129200884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.7	chr4	-	4175	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-57	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGTTTGAGTGAAT	2556	False	NA	-2	True	AATAAA	-13	NA	129229099	129200886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203670_129203843_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.8	chr4	-	4130	13	NNC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.072173866219	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGTTTGAGTGAAT	2614	False	NA	-2	True	AATAAA	-13	NA	129229041	129200886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129203656_129203816_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ES.24417.9	chr4	-	2932	3	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	16739	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	315	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTATGTTTGA	NA	False	NA	-8	True	AATAAA	-7	NA	129211698	129200892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129203670_129211440_129211552_129211654
ES.24418.1	chr4	-	5280	1	Antisense	novelGene_ENSMUSG00000057572.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAACTTGTGTGGCCAG	3571	False	NA	NA	False	NA	NA	NA	129244893	129239613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_129239600_129244900
ES.24418.2	chr4	-	998	1	Intergenic	novelGene_20075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATATTGAAAAA	2906	False	NA	NA	False	NA	NA	NA	129245558	129244560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129244600_129245600
ES.24419.1	chr4	-	2015	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3799	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	63.2509881345738	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTCGTGACACTTT	689	False	NA	-2	True	AATAAA	-22	NA	129268110	129247422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268037
ES.24419.2	chr4	-	2365	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	-46	2	-46	-2	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTCGTGACACTTT	NA	False	NA	-2	True	AATAAA	-22	NA	129271955	129247422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ES.24419.3	chr4	-	2225	6	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.4128905386238	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTTTTTCGTGACACT	NA	False	NA	-4	True	AATAAA	-20	NA	129271923	129247424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532_129271662_129271767
ES.24419.4	chr4	-	2027	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	3227	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	62.8191849676514	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAATCTTTTTCGTGAC	117	False	NA	-7	True	AATAAA	-17	NA	129268682	129247427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129268592
ES.24419.5	chr4	-	1922	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	355	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.5994209238392	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAATCTTTTTCGTGAC	NA	False	NA	-7	True	AATAAA	-17	NA	129271554	129247427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254457_129263021_129263116_129271532
ES.24419.6	chr4	-	2210	6	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	219	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.3380126626081	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACAATCTTTTTCGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	129271690	129247428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129261061_129261178_129263021_129263116_129271532
ES.24419.7	chr4	-	2013	5	NNC	ENSMUSG00000028807.3	novel	2321	5	NA	NA	-74	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.6828077270467	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACAATCTTTTTCGTGA	NA	False	NA	-8	True	AATAAA	-16	NA	129271983	129247428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271906
ES.2442.1	chr10	+	1315	2	FSM	ENSMUSG00000037535.6	ENSMUST00000187763.2	485	2	-22	-808	-22	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACAGTTCAGCTG	6208	False	NA	NA	False	NA	NA	NA	21295353	21302453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21295418_21301202
ES.24420.1	chr4	-	223	1	Intergenic	novelGene_20081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAGTTCACAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	129277901	129277678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129277700_129277900
ES.24420.2	chr4	-	178	2	Intergenic	novelGene_20083	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	129281278	129277721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129277766_129281144
ES.24420.3	chr4	-	174	2	Intergenic	novelGene_20082	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	129281275	129277721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129277841_129281220
ES.24420.4	chr4	-	180	2	Intergenic	novelGene_20084	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	129281278	129277721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129277870_129281246
ES.24420.5	chr4	-	174	2	Intergenic	novelGene_20085	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	129281275	129277722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129277819_129281197
ES.24420.6	chr4	-	168	1	Intergenic	novelGene_20086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCTACAGCT	NA	False	NA	NA	False	NA	NA	NA	129280458	129280290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129280300_129280500
ES.24420.7	chr4	-	210	1	Intergenic	novelGene_20087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGTAGTAGAAAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	129281281	129281071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129281100_129281300
ES.24421.1	chr4	-	179	1	Intergenic	novelGene_20089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATTGGTAATAA	927	False	NA	NA	False	NA	NA	NA	129308952	129308773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129308800_129309000
ES.24422.1	chr4	-	321	1	Intergenic	novelGene_20090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	129311261	129310940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129310900_129311300
ES.24423.1	chr4	-	231	1	Intergenic	novelGene_20091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAGGAGGCTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	129312856	129312625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129312600_129312900
ES.24424.1	chr4	-	1819	2	ISM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	12375	260	4086	244	3prime_fragment	FALSE	canonical	3	12	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTCTGCAAGAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	129322236	129319817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129321621_129322220
ES.24424.2	chr4	-	2772	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	11	505	11	-1	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGCTTGTATTTT	750	False	NA	-1	True	ATTAAA	-14	NA	129334600	129320062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
ES.24424.3	chr4	-	1699	2	NNC	ENSMUSG00000048485.13	novel	516	2	NA	NA	-224	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGCTTGTATTTT	8804	False	NA	-1	True	ATTAAA	-14	NA	129326546	129320062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129321429_129326213
ES.24424.4	chr4	-	2817	4	NNC	ENSMUSG00000048485.13	novel	3288	4	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.62466929133727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTGCTTGTATTTT	757	False	NA	-1	True	ATTAAA	-14	NA	129334593	129320062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129321621_129322168_129322400_129326103_129327105_129334566
ES.24425.1	chr4	-	176	1	Intergenic	novelGene_20093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	129344521	129344345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129344300_129344500
ES.24426.1	chr4	-	148	1	Intergenic	novelGene_20094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129344882	129344734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129344700_129344900
ES.24427.1	chr4	+	172	1	Intergenic	novelGene_20095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCTTATTTTATT	9738	False	NA	4	True	NA	NA	NA	129345766	129345938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129345800_129345900
ES.24428.1	chr4	-	172	1	Intergenic	novelGene_20096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAACAAGGCCG	NA	False	NA	NA	False	NA	NA	NA	129352717	129352545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129352500_129352700
ES.24429.1	chr4	+	2735	11	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	40	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8068776811839	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCGGAAGTGTCCGGGG	NA	False	NA	60	True	ATTAAA	-11	NA	129355413	129382287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129355455_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.10	chr4	+	2499	11	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-130	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	36.7662889070953	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAGTAAAG	NA	False	NA	-66	True	TTTAAA	-37	NA	129355476	129382161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.11	chr4	+	4156	10	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-40	intron_retention	FALSE	canonical	3	105	junction_4	12.0840676660645	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATTTGCCATAACAGC	NA	False	NA	24	True	AATAAA	-20	NA	129355476	129382251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129355499_129355734_129355796_129359022_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.12	chr4	+	2665	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	2	-74	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	47.3480169673852	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAACAAAAATAAAAAGTT	NA	False	NA	-10	True	ATTAAA	-2	NA	129355481	129382217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360112_129360228_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.13	chr4	+	2837	10	ISM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	216	6	-39	-6	3prime_fragment	FALSE	canonical	3	95	junction_2	13.9920612412102	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGCGGAAGTGTCCGG	NA	False	NA	58	True	ATTAAA	-9	NA	129355589	129382285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.15	chr4	+	2656	10	NNC	ENSMUSG00000040859.15	novel	456	4	NA	NA	521	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1842260463582	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCCTGAACCTTTTAC	NA	False	NA	7	True	AATAAA	-3	NA	129356149	129382234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129356226_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.17	chr4	+	6770	2	ISM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	18241	7	7949	-7	3prime_fragment	FALSE	canonical	3	123	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGCGGAAGTGTCCG	NA	False	NA	57	True	ATTAAA	-8	NA	129373614	129382284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129378934_129380833
ES.24429.2	chr4	+	2777	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	44	2	44	-2	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGAAGTGTCCGGGGAT	NA	False	NA	62	True	ATTAAA	-13	NA	129355417	129382289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.3	chr4	+	2643	11	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	36.7662889070953	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGAAGTGTCCGGGGAT	NA	False	NA	62	True	ATTAAA	-13	NA	129355460	129382289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.4	chr4	+	2846	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	-4	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.1608816746525	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTACAGATTTGCCATA	NA	False	NA	19	True	AATAAA	-15	NA	129355460	129382246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129359735_129359891_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.5	chr4	+	4548	9	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	2	-39	intron_retention	FALSE	canonical	3	105	junction_4	12.7812117970089	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTTGCCATAACAGCA	NA	False	NA	25	True	AATAAA	-21	NA	129355466	129382252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129355499_129355734_129355796_129359022_129360784_129362786_129362842_129365719_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.6	chr4	+	2600	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	93	130	2	-130	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAGTAAAG	NA	False	NA	-66	True	TTTAAA	-37	NA	129355466	129382161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.7	chr4	+	2800	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	2	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.3480169673852	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTACAGATTTGCCATA	NA	False	NA	19	True	AATAAA	-15	NA	129355466	129382246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360112_129360228_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.24429.9	chr4	+	2752	11	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.6224666921243	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGAAGTGTCCGGGGAT	NA	False	NA	62	True	ATTAAA	-13	NA	129355476	129382289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360581_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ES.2443.1	chr10	-	246	1	Intergenic	novelGene_1861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGCAAAGTGAAGGTAT	3358	False	NA	NA	False	NA	NA	NA	21407225	21406979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21407000_21407200
ES.24430.1	chr4	-	105	1	Intergenic	novelGene_20097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAAAAAAACCTA	7793	False	NA	NA	False	NA	NA	NA	129371208	129371103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129371100_129371200
ES.24431.1	chr4	+	169	1	Intergenic	novelGene_20098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3358	False	NA	NA	False	NA	NA	NA	129386102	129386271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129386100_129386300
ES.24432.1	chr4	+	1655	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	-52	2	-52	-2	multi-exon	FALSE	canonical	3	8029	junction_1	0	2874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGAGTGGTCTTCTGGG	NA	False	NA	22	True	AATAAA	-22	NA	129407321	129409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24432.11	chr4	+	5980	4	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	51	4685	intron_retention	FALSE	non_canonical	0	0	junction_2	3784.90689743119	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	129407424	129414463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129407710_129408509_129412076_129412124_129413258_129413467
ES.24432.12	chr4	+	1307	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	51	247	51	-247	multi-exon	FALSE	canonical	3	8029	junction_1	0	2867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTGAAATCAACCATGT	NA	False	NA	NA	False	TATAAA	-26	NA	129407424	129409531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24432.13	chr4	+	3883	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	51	-2329	51	2329	multi-exon	FALSE	canonical	3	8029	junction_1	0	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTCTTCTTCTTCTTT	NA	False	NA	NA	False	GATAAA	-17	NA	129407424	129412107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24432.14	chr4	+	1707	4	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	51	50998	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3784.90689743119	2881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAATATAGGAAGGCCG	NA	False	NA	NA	False	NA	NA	NA	129407424	129460776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129407710_129408509_129409769_129439780_129439913_129460745
ES.24432.15	chr4	+	1443	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	52	110	52	-110	multi-exon	FALSE	canonical	3	8029	junction_1	0	2874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCCAGATTTGTACTTT	NA	False	NA	-86	True	NA	NA	NA	129407425	129409668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24432.16	chr4	+	1748	2	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	395	-11	at_least_one_novel_splicesite	FALSE	canonical	1	89	junction_1	0	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTTTCATTGAGTGG	NA	False	NA	13	True	AATAAA	-13	NA	129407768	129409767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129408259_129408509
ES.24432.17	chr4	+	2914	6	Antisense	novelGene_ENSMUSG00000028800.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	129409873	129414477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129410742_129411148_129411302_129411585_129411915_129412623_129412764_129412843_129413258_129413467
ES.24432.18	chr4	+	4073	3	Antisense	novelGene_ENSMUSG00000028800.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	129410147	129414477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129412076_129412122_129413258_129413467
ES.24432.19	chr4	+	156	1	Intergenic	novelGene_20099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAACAAAAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	129431074	129431230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129431100_129431200
ES.24432.2	chr4	+	2351	1	NIC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	43	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2874	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTTTCATTGAGTGG	NA	False	NA	13	True	AATAAA	-13	NA	129407416	129409767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129407400_129409800
ES.24432.3	chr4	+	4899	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	45	-3339	45	3339	multi-exon	FALSE	canonical	3	8029	junction_1	0	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTGAGCTTTGATTGGT	NA	False	NA	NA	False	AGTAAA	-17	NA	129407418	129413117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24432.5	chr4	+	1373	3	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	50	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4014.5	2874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTTTCATTGAGTGG	NA	False	NA	13	True	AATAAA	-13	NA	129407423	129409767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129407710_129408509_129408954_129409124
ES.24432.6	chr4	+	1643	4	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	50	19312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3784.90689743119	2876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATTAATTAATTAAACAA	NA	False	NA	NA	False	NA	NA	NA	129407423	129429090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129407710_129408509_129409769_129414498_129414567_129429060
ES.24432.8	chr4	+	4842	3	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	51	3337	intron_retention	TRUE	non_canonical	0	0	junction_2	4014.5	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAACTGAGCTTTGATTG	NA	False	NA	NA	False	AGTAAA	-15	NA	129407424	129413115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129407710_129408509_129412076_129412124
ES.24432.9	chr4	+	490	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	51	1064	51	-1064	multi-exon	FALSE	canonical	3	8029	junction_1	0	2829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTGAGTGGCCTGTCC	NA	False	NA	NA	False	AAGAAA	-20	NA	129407424	129408714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129407710_129408509
ES.24433.1	chr4	-	2056	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	-12	-6	-12	6	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTTTAAGTTCTTCCC	8796	False	NA	1	True	AATAAA	-28	NA	129436518	129409890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.10	chr4	-	7892	11	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	37	-3	intron_retention	FALSE	canonical	3	1463	junction_8	218.903837335027	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCCCTGGTTGGTTTAA	8867	False	NA	-8	True	AATAAA	-19	NA	129436447	129409899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129416895_129418038_129422838_129428406_129428520_129436373
ES.24433.11	chr4	-	2119	15	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	43	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	664.707746122386	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8873	False	NA	-11	True	AATAAA	-16	NA	129436441	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129429922_129430075_129436373
ES.24433.13	chr4	-	1836	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	531.809014969065	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8863	False	NA	-11	True	AATAAA	-16	NA	129436451	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411840_129412689_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.14	chr4	-	2757	9	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	-278	-6	intron_retention	FALSE	canonical	3	1463	junction_8	203.804708912724	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	NA	False	NA	-11	True	AATAAA	-16	NA	129418655	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416895_129418038
ES.24433.15	chr4	-	1963	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	523.063687615356	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8862	False	NA	-11	True	AATAAA	-16	NA	129436452	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436388
ES.24433.16	chr4	-	1981	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	531.636749234	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8841	False	NA	-11	True	AATAAA	-16	NA	129436473	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411823_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.18	chr4	-	2068	13	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	31	-6	intron_retention	FALSE	canonical	3	1463	junction_9	210.239744101823	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8861	False	NA	-11	True	AATAAA	-16	NA	129436453	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.2	chr4	-	3387	10	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	-990	1	intron_retention	FALSE	canonical	3	1463	junction_9	192.17931441466	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGTTGGTTTAAGTTC	NA	False	NA	-4	True	AATAAA	-23	NA	129419367	129409895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416895_129418038
ES.24433.20	chr4	-	2304	13	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	1463	junction_9	190.91728502737	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	8799	False	NA	-11	True	AATAAA	-16	NA	129436515	129409902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.23	chr4	-	1414	12	ISM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	14	1280	-8	699	5prime_fragment	FALSE	canonical	3	1463	junction_8	194.952590125636	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAAGATCCTGAAGA	8822	False	NA	NA	False	AAAAAG	-27	NA	129436492	129411176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.4	chr4	-	6621	13	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	1463	junction_10	202.273793408835	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8831	False	NA	-5	True	AATAAA	-22	NA	129436483	129409896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129422838_129428406_129428520_129436373
ES.24433.5	chr4	-	1967	14	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	531.636749234	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8867	False	NA	-5	True	AATAAA	-22	NA	129436447	129409896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411701_129411801_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ES.24433.6	chr4	-	6667	13	NNC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	-4	0	intron_retention	FALSE	canonical	1	6	junction_5	551.678971413629	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8804	False	NA	-5	True	AATAAA	-22	NA	129436510	129409896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412604_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129422838_129428406_129428520_129436373
ES.24433.8	chr4	-	1877	13	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	524.926099296103	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCCTGGTTGGTTTAAG	8854	False	NA	-7	True	AATAAA	-20	NA	129436460	129409898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129436373
ES.24433.9	chr4	-	4149	9	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	-1471	-2	intron_retention	FALSE	canonical	3	1463	junction_8	202.99568960941	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCCTGGTTGGTTTAAG	NA	False	NA	-7	True	AATAAA	-20	NA	129419848	129409898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129410430_129410692_129410742_129411148_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416895_129418038
ES.24434.11	chr4	-	1810	7	NNC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-92	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	50.9825678268781	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTTCTACTGCATA	NA	False	NA	-3	True	NA	NA	NA	129450344	129442144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129449879
ES.24434.12	chr4	-	1464	7	NNC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-65	-10	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	49.1813537385416	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTGTACATTTTTCTA	NA	False	NA	-10	True	NA	NA	NA	129450089	129442151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129449963
ES.24434.2	chr4	-	2091	13	NNC	ENSMUSG00000000409.15	novel	2074	13	NA	NA	-243	-1	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_12	60.3522069926932	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	-1	True	NA	NA	NA	129452427	129442142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873_129451984_129452319
ES.24434.4	chr4	-	1716	6	NIC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-63	-1	intron_retention	FALSE	canonical	3	108	junction_2	14.4166570327521	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTCTACTGCATACT	NA	False	NA	-1	True	NA	NA	NA	129450315	129442142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449799_129450080
ES.24434.9	chr4	-	1680	6	NIC	ENSMUSG00000000409.15	novel	2185	12	NA	NA	-85	-2	intron_retention	FALSE	canonical	3	108	junction_2	14.4166570327521	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTTCTACTGCATAC	NA	False	NA	-2	True	NA	NA	NA	129450337	129442143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129442794_129445297_129445430_129445509_129445818_129449331_129449512_129449645_129449799_129450080
ES.24435.1	chr4	+	200	1	Intergenic	novelGene_20100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTTTCCCTAGTCTGG	435	False	NA	NA	False	NA	NA	NA	129474511	129474711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129474500_129474700
ES.24436.1	chr4	+	181	1	Intergenic	novelGene_20101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCGAGACAGGGTT	3401	False	NA	NA	False	NA	NA	NA	129477477	129477658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129477500_129477700
ES.24437.1	chr4	-	1101	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	2	20	2	-20	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTCCTTGTCAGGC	6379	False	NA	-20	True	AATAAA	-12	NA	129494439	129485772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ES.24437.10	chr4	-	1186	12	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-5	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	542.61052497918	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6404	False	NA	-21	True	AATAAA	-11	NA	129494414	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490003_129490115_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ES.24437.11	chr4	-	4728	7	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	1306	22	1257	-22	intron_retention	FALSE	canonical	3	1341	junction_3	44.5224662389675	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGTTCCTTGTCAG	7683	False	NA	-22	True	AATAAA	-10	NA	129493135	129485774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056
ES.24437.12	chr4	-	997	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-15	-22	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_7	428.58488074126	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGTTCCTTGTCAG	6394	False	NA	-22	True	AATAAA	-10	NA	129494424	129485774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489120_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ES.24437.13	chr4	-	1241	10	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-11	-25	intron_retention	FALSE	canonical	3	822	junction_9	189.384056846542	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAAATAGTTCCTTGT	6366	False	NA	-25	True	AATAAA	-7	NA	129494452	129485777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ES.24437.14	chr4	-	176	1	Intergenic	novelGene_20102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTTCCAGC	2777	False	NA	NA	False	NA	NA	NA	129488353	129488177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129488200_129488400
ES.24437.2	chr4	-	2414	9	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	146	21	97	-21	intron_retention	FALSE	canonical	3	1341	junction_3	44.9047603267181	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6523	False	NA	-21	True	AATAAA	-11	NA	129494295	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747
ES.24437.4	chr4	-	3090	10	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-5	-21	intron_retention	FALSE	canonical	3	822	junction_9	184.406020094013	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6404	False	NA	-21	True	AATAAA	-11	NA	129494414	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129492836_129494201_129494295_129494386
ES.24437.6	chr4	-	989	8	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	2	-21	intron_retention	FALSE	canonical	0	0	junction_7	492.849440933609	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6428	False	NA	-21	True	AATAAA	-11	NA	129494390	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129494201
ES.24437.8	chr4	-	1079	11	NNC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	1	-21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	438.959041369465	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6378	False	NA	-21	True	AATAAA	-11	NA	129494440	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129485928_129486059_129486153_129486811_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ES.24437.9	chr4	-	2611	8	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	-6	-21	intron_retention	FALSE	canonical	3	1341	junction_3	47.5815090134813	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTCCTTGTCAGG	6403	False	NA	-21	True	AATAAA	-11	NA	129494415	129485773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129489207_129490666_129490733_129492747
ES.24438.1	chr4	+	1562	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-32	-11	0	4	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3164	False	NA	20	True	AATAAA	-20	NA	129494460	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
ES.24438.10	chr4	+	1494	5	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	290.074451649917	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTTAGCAAATGTTTT	3175	False	NA	12	True	AATAAA	-12	NA	129494471	129502317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129495327_129500879_129500973_129501248
ES.24438.11	chr4	+	1202	4	ISM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-21	614	-1	30	intron_retention	FALSE	canonical	3	284	junction_2	192.698382625975	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3175	False	NA	NA	False	NA	NA	NA	129494471	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879
ES.24438.12	chr4	+	1144	5	NNC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	258.860362937241	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTAAAAGGATTTAGCA	3176	False	NA	NA	False	AAGAAA	-1	NA	129494472	129501922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501251
ES.24438.13	chr4	+	2334	5	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_2	278.30502600564	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	16	True	AATAAA	-16	NA	129494472	129502321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129495037_129495199_129496055_129500879_129500973_129501248
ES.24438.14	chr4	+	1476	4	FSM	ENSMUSG00000028797.21	ENSMUST00000173937.8	756	4	-6	-714	-2	2	multi-exon	FALSE	canonical	3	12	junction_2	291.296336323606	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAAATGTTTTATTTGT	3181	False	NA	18	True	AATAAA	-18	NA	129494477	129502323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129495037_129500879_129500973_129501248
ES.24438.15	chr4	+	2219	5	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	74	junction_2	271.708023436924	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3182	False	NA	16	True	AATAAA	-16	NA	129494478	129502321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129496055_129500879_129500973_129501248
ES.24438.16	chr4	+	1363	4	FSM	ENSMUSG00000028797.21	ENSMUST00000174819.8	652	4	-4	-707	0	4	multi-exon	FALSE	canonical	3	97	junction_2	255.064697674923	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3187	False	NA	20	True	AATAAA	-20	NA	129494483	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129494928_129500879_129500973_129501248
ES.24438.17	chr4	+	914	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	-9	614	0	30	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3187	False	NA	NA	False	NA	NA	NA	129494483	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
ES.24438.18	chr4	+	726	6	NNC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	271.450621660736	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3188	False	NA	9	True	AATAAA	-9	NA	129494484	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248_129501308_129501999
ES.24438.19	chr4	+	831	6	NNC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	273.029375708915	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3189	False	NA	9	True	AATAAA	-9	NA	129494485	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501251_129501308_129501999
ES.24438.2	chr4	+	1671	6	NIC	ENSMUSG00000028797.21	novel	769	5	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	295.098220936691	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3165	False	NA	20	True	AATAAA	-20	NA	129494461	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129495419_129495987_129496055_129500879_129500973_129501248
ES.24438.20	chr4	+	1863	4	NIC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	2	30	intron_retention	FALSE	canonical	3	436	junction_1	140.878986683213	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3189	False	NA	NA	False	NA	NA	NA	129494485	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129496055_129500879_129500973_129501248
ES.24438.21	chr4	+	1387	5	FSM	ENSMUSG00000028797.21	ENSMUST00000173758.8	453	5	7	-941	-2	2	multi-exon	FALSE	canonical	0	0	junction_2	300.683388300717	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGCTTAGCAAATGTTT	3194	False	NA	11	True	AATAAA	-11	NA	129494490	129502316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129494928_129496014_129496055_129500879_129500973_129501248
ES.24438.22	chr4	+	1657	4	NNC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_3	293.476858826495	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3197	False	NA	9	True	AATAAA	-9	NA	129494493	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494928_129495987_129496055_129500879_129500973_129501251
ES.24438.23	chr4	+	1123	6	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	0	30	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	299.030834530488	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3197	False	NA	NA	False	NA	NA	NA	129494493	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129495987_129496055_129500879_129500973_129501248
ES.24438.24	chr4	+	1656	6	FSM	ENSMUSG00000028797.21	ENSMUST00000151969.8	875	6	14	-795	0	4	multi-exon	FALSE	canonical	3	29	junction_3	309.843831631356	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3197	False	NA	20	True	AATAAA	-20	NA	129494493	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129495037_129495199_129495327_129495987_129496055_129500879_129500973_129501248
ES.24438.25	chr4	+	1046	4	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	30	intron_retention	FALSE	canonical	3	325	junction_1	193.096406549221	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3197	False	NA	NA	False	NA	NA	NA	129494493	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494928_129495987_129496055_129500879_129500973_129501248
ES.24438.26	chr4	+	898	5	NIC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	0	30	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	268.921340729961	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3197	False	NA	NA	False	NA	NA	NA	129494493	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501254
ES.24438.28	chr4	+	1764	7	NNC	ENSMUSG00000028797.21	novel	769	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	267.610880446467	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3197	False	NA	9	True	AATAAA	-9	NA	129494493	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129494928_129495199_129495419_129495987_129496055_129500135_129500272_129500879_129500973_129501248
ES.24438.29	chr4	+	1737	6	NIC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	299.030834530488	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3197	False	NA	9	True	AATAAA	-9	NA	129494493	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129495987_129496055_129500879_129500973_129501248
ES.24438.3	chr4	+	1615	5	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	30	intron_retention	FALSE	canonical	3	74	junction_2	271.708023436924	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3165	False	NA	NA	False	NA	NA	NA	129494461	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129496055_129500879_129500973_129501248
ES.24438.30	chr4	+	1720	6	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	314.184404450635	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3198	False	NA	20	True	AATAAA	-20	NA	129494494	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129496014_129496055_129500879_129500973_129501248
ES.24438.31	chr4	+	940	3	NIC	ENSMUSG00000028797.21	novel	1124	4	NA	NA	0	-8	intron_retention	FALSE	canonical	3	97	junction_1	312	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	3198	False	NA	NA	False	NA	NA	NA	129494494	129501662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494928_129500879_129500973_129501248
ES.24438.32	chr4	+	1765	6	NNC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	273.969633353772	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3198	False	NA	20	True	AATAAA	-20	NA	129494494	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495987_129496055_129496409_129496647_129500879_129500973_129501248
ES.24438.33	chr4	+	1384	7	NNC	ENSMUSG00000028797.21	novel	1366	7	NA	NA	0	-3	intron_retention	FALSE	canonical	1	7	junction_3	320.768045305153	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTAGCAAATGTTTTA	3198	False	NA	13	True	AATAAA	-13	NA	129494494	129502318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495199_129495755_129495987_129496055_129500879_129500973_129501248_129501308_129501999
ES.24438.34	chr4	+	758	4	NNC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	3	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	296.490959202619	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3206	False	NA	NA	False	NA	NA	NA	129494502	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129494960_129500872_129500973_129501248
ES.24438.35	chr4	+	5054	8	NNC	ENSMUSG00000028797.21	novel	1575	5	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_6	272.680571140577	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGATTTAAAATCATTT	3207	False	NA	NA	False	ACTAAA	-21	NA	129494503	129517852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129512276_129512481_129512693_129513376_129513991_129517547_129517681
ES.24438.36	chr4	+	674	4	NIC	ENSMUSG00000028797.21	novel	449	5	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	186.279956576713	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	3207	False	NA	NA	False	NA	NA	NA	129494503	129501662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129500879_129500973_129501254
ES.24438.37	chr4	+	823	5	NNC	ENSMUSG00000028797.21	novel	1519	5	NA	NA	4	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	300.683388300717	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3207	False	NA	NA	False	NA	NA	NA	129494503	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129494960_129495981_129496055_129500879_129500973_129501248
ES.24438.38	chr4	+	158	1	Intergenic	novelGene_20103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8226	False	NA	NA	False	NA	NA	NA	129499522	129499680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129499500_129499700
ES.24438.4	chr4	+	1810	7	NNC	ENSMUSG00000028797.21	novel	1366	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	273.883440333454	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3168	False	NA	9	True	AATAAA	-9	NA	129494464	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129494525_129494775_129495037_129495199_129495327_129495987_129496055_129500135_129500272_129500879_129500973_129501248
ES.24438.5	chr4	+	1524	6	NIC	ENSMUSG00000028797.21	novel	1366	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	321.507324955436	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3174	False	NA	9	True	AATAAA	-9	NA	129494470	129502314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495662_129495755_129495987_129496055_129500879_129500973_129501248
ES.24438.6	chr4	+	1563	6	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	306.154601467951	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTAGCAAATGTTTTA	3174	False	NA	13	True	AATAAA	-13	NA	129494470	129502318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129495327_129495987_129496055_129500879_129500973_129501248
ES.24438.7	chr4	+	818	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	-2	621	-2	30	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3174	False	NA	NA	False	NA	NA	NA	129494470	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ES.24438.8	chr4	+	1443	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	-2	-4	-2	4	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTATTTGTGT	3174	False	NA	20	True	AATAAA	-20	NA	129494470	129502325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ES.24438.9	chr4	+	1373	6	NIC	ENSMUSG00000028797.21	novel	1366	7	NA	NA	-2	30	intron_retention	FALSE	canonical	1	7	junction_3	311.58498038256	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACGAAGGGCAGCACTG	3174	False	NA	NA	False	NA	NA	NA	129494470	129501700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129494525_129494775_129494928_129495199_129495755_129495987_129496055_129500879_129500973_129501248
ES.24439.1	chr4	+	6801	1	Antisense	novelGene_ENSMUSG00000053841.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGATAAATAGATATAGATA	4138	False	NA	NA	False	NA	NA	NA	129520031	129526832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129520000_129526800
ES.2444.1	chr10	+	1090	3	FSM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	-28	0	-28	0	multi-exon	TRUE	canonical	3	7	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGACTCTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	21469015	21498275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21469134_21469230_21469472_21497544
ES.24440.1	chr4	+	161	1	Intergenic	novelGene_20104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	129531516	129531677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129531500_129531700
ES.24441.1	chr4	-	4194	2	NNC	ENSMUSG00000078552.11	novel	1023	9	NA	NA	1484	3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTGTAGATTTATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	129506563	129502318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129504607_129504657
ES.24442.1	chr4	-	2575	6	NNC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-1	35	intron_retention	TRUE	non_canonical	0	0	junction_1	51.0505631702531	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGTATGTATATAAGT	NA	False	NA	NA	False	NA	NA	NA	129512874	129508883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129509268_129509348_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ES.24442.10	chr4	-	2243	5	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	13	133	intron_retention	FALSE	canonical	1	3	junction_4	49.8967684324346	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACATTTCACGCCTT	NA	False	NA	-27	True	NA	NA	NA	129512856	129509418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512666
ES.24442.12	chr4	-	1955	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	15	669	-4	-36	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTGTTTACATGAATTA	NA	False	NA	NA	False	NA	NA	NA	129512877	129509587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ES.24442.13	chr4	-	501	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	-11	1	-8	-1	multi-exon	FALSE	canonical	3	28	junction_1	58	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGACTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	129512900	129511892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129512156_129512284_129512429_129512806
ES.24442.14	chr4	-	983	1	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGACTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	129512875	129511892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129511900_129512900
ES.24442.2	chr4	-	1448	2	NNC	ENSMUSG00000040795.13	novel	402	2	NA	NA	417	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCATATGTGTATGTAT	NA	False	NA	NA	False	NA	NA	NA	129510409	129508889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129509270_129509341
ES.24442.3	chr4	-	3071	5	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	28	junction_3	44.9186765165671	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTACAAATATATGTA	NA	False	NA	NA	False	NA	NA	NA	129512878	129508918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129510974_129511150_129511252_129511456_129512156_129512284_129512429_129512806
ES.24442.4	chr4	-	2647	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	-11	3	-11	-3	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATATGTACAAATATAT	NA	False	NA	NA	False	NA	NA	NA	129512903	129508921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ES.24442.7	chr4	-	2354	4	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	186	intron_retention	FALSE	canonical	3	111	junction_2	13.5236418500672	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGTTCGAGGCCAG	NA	False	NA	26	True	NA	NA	NA	129512877	129509365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129511252_129511456_129511710_129512284_129512429_129512806
ES.24442.8	chr4	-	1281	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	-4	163	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	35.7960891718635	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGGAGGCAGAGGCAGG	NA	False	NA	3	True	NA	NA	NA	129512877	129509388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ES.24442.9	chr4	-	2161	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	-22	500	-22	133	multi-exon	FALSE	canonical	3	109	junction_1	14.396180048888	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACATTTCACGCCTT	NA	False	NA	-27	True	NA	NA	NA	129512914	129509418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ES.24443.1	chr4	-	4206	3	NNC	ENSMUSG00000028795.16	novel	428	3	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	43.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTCGGTGCTCTCCTTG	NA	False	NA	-3	True	ATTAAA	-15	NA	129517678	129513067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129513366_129513567_129514273_129514475
ES.24443.10	chr4	-	4758	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	-10	-179	-10	179	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGTGTACAGCTGCAA	7850	False	NA	NA	False	AGTAAA	-19	NA	129534868	129519691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.12	chr4	-	4591	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	-21	-1	-21	1	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGCCAATCGAATTATT	7839	False	NA	-4	True	ATTAAA	-23	NA	129534879	129519869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.13	chr4	-	4814	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGCCAATCGAATTAT	7851	False	NA	-5	True	ATTAAA	-22	NA	129534867	129519870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.14	chr4	-	4697	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	4	junction_10	100.747009881187	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGCCAATCGAATTA	7914	False	NA	-6	True	ATTAAA	-21	NA	129534804	129519871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534404_129534763
ES.24443.15	chr4	-	4527	11	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	101.622094054394	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCTCAGCCAATCGAAT	7939	False	NA	-8	True	ATTAAA	-19	NA	129534779	129519873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534723
ES.24443.17	chr4	-	4554	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.0475138506767	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7862	False	NA	-10	True	ATTAAA	-17	NA	129534856	129519875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530973_129533021_129533361_129534048_129534221_129534763
ES.24443.18	chr4	-	4613	11	NIC	ENSMUSG00000053841.16	novel	4847	10	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	101.038655968891	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	8228	False	NA	-10	True	ATTAAA	-17	NA	129534490	129519875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534346
ES.24443.19	chr4	-	4536	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.04038416235	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7845	False	NA	-10	True	ATTAAA	-17	NA	129534873	129519875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523386_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.2	chr4	-	840	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	38	1	-10	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTCGGTGCTCTCCTTG	NA	False	NA	-3	True	ATTAAA	-15	NA	129517702	129513067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ES.24443.20	chr4	-	4531	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	101.913885216883	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7902	False	NA	-10	True	ATTAAA	-17	NA	129534816	129519875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534230_129534763
ES.24443.21	chr4	-	4521	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	101.569729742675	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATCTCAGCCAATCG	7904	False	NA	-11	True	ATTAAA	-16	NA	129534814	129519876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534046_129534221_129534763
ES.24443.23	chr4	-	4496	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.459839644188	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTATCTCAGCCAATC	7851	False	NA	-12	True	ATTAAA	-15	NA	129534867	129519877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.24	chr4	-	4449	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	103.515967635701	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGTATCTCAGCCAAT	7880	False	NA	-13	True	ATTAAA	-14	NA	129534838	129519878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129533021_129533361_129534048_129534221_129534763
ES.24443.25	chr4	-	4952	10	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	30	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	140.256114938985	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGTATCTCAGCCAAT	7890	False	NA	-13	True	ATTAAA	-14	NA	129534828	129519878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522994_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534404_129534763
ES.24443.26	chr4	-	4499	11	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	101.038655968891	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGTATCTCAGCCAAT	7937	False	NA	-13	True	ATTAAA	-14	NA	129534781	129519878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534748
ES.24443.27	chr4	-	3386	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	-9	1192	-9	-1187	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTCTACCATTTCAAAT	7851	False	NA	NA	False	TTTAAA	-39	NA	129534867	129521062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.28	chr4	-	3453	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	42	-1252	intron_retention	FALSE	canonical	3	4	junction_10	100.747009881187	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCTGATGATCATGT	7902	False	NA	NA	False	AGTAAA	-17	NA	129534816	129521127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534404_129534763
ES.24443.29	chr4	-	3178	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	42	-1252	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	103.515967635701	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCTGATGATCATGT	7902	False	NA	NA	False	AGTAAA	-17	NA	129534816	129521127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129533021_129533361_129534048_129534221_129534763
ES.24443.3	chr4	-	6620	5	ISM	ENSMUSG00000028795.16_ENSMUSG00000053841.16	ENSMUST00000151838.8	744	6	-4852	2	-4742	-2	intron_retention	FALSE	canonical	1	5	junction_3	37.2046704057434	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACTACTCGGTGCTCTCC	NA	False	NA	-6	True	ATTAAA	-12	NA	129522482	129513070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129513240_129514249_129514273_129514475_129514647_129514776_129514944_129516392
ES.24443.32	chr4	-	3671	10	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-36	-1261	intron_retention	FALSE	canonical	3	4	junction_9	105.432208633244	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACATCTCGTGCTGA	7911	False	NA	NA	False	AGTAAA	-8	NA	129534807	129521136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534404_129534763
ES.24443.34	chr4	-	3518	10	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-43	-1261	intron_retention	FALSE	canonical	0	0	junction_6	106.035633423654	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACATCTCGTGCTGA	7904	False	NA	NA	False	AGTAAA	-8	NA	129534814	129521136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528362_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.35	chr4	-	3267	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-42	-1261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	101.913885216883	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACATCTCGTGCTGA	7905	False	NA	NA	False	AGTAAA	-8	NA	129534813	129521136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534230_129534763
ES.24443.37	chr4	-	3524	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	14	-1262	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAACATCTCGTGCTG	7874	False	NA	NA	False	AGTAAA	-7	NA	129534844	129521137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.38	chr4	-	3425	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	29	1393	29	-1393	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCCTCTAAGCCCCCA	8149	False	NA	NA	False	NA	NA	NA	129534569	129521268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
ES.24443.39	chr4	-	2520	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	5	2044	5	-2039	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTCCTCAGGTGCC	7865	False	NA	0	True	ATTAAA	-31	NA	129534853	129521914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.4	chr4	-	2785	16	Fusion	ENSMUSG00000028795.16_ENSMUSG00000053841.16	novel	4569	11	NA	NA	42	-6	multi-exon	FALSE	canonical	0	0	junction_5	135.427454954878	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGACTACTCGGTGCT	7902	False	NA	-10	True	ATTAAA	-8	NA	129534816	129513074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129522372_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528362_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.43	chr4	-	3437	9	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	43	2055	43	-2055	intron_retention	FALSE	canonical	3	289	junction_1	26.3818119165458	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGATACTCTAGCA	8163	False	NA	-16	True	ATTAAA	-15	NA	129534555	129521930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021
ES.24443.44	chr4	-	2742	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	1	-2057	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAGGGATACTCTAG	7861	False	NA	-18	True	ATTAAA	-13	NA	129534857	129521932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.45	chr4	-	2370	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	-42	-2057	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	103.515967635701	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAGGGATACTCTAG	7905	False	NA	-18	True	ATTAAA	-13	NA	129534813	129521932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129533021_129533361_129534048_129534221_129534763
ES.24443.46	chr4	-	2417	11	NNC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	38	-2058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	147.911460002259	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAACAGGGATACTCTA	7898	False	NA	-19	True	ATTAAA	-12	NA	129534820	129521933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530901_129530976_129533021_129533361_129534081_129534221_129534763
ES.24443.7	chr4	-	6366	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	26	-1823	26	1823	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTACTGATTGTCTT	7886	False	NA	-8	True	CATAAA	-14	NA	129534832	129518047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.8	chr4	-	6609	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	19	1823	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTACTGATTGTCTT	7879	False	NA	-8	True	CATAAA	-14	NA	129534839	129518047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24443.9	chr4	-	5071	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	0	-502	0	502	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCATGCACTGGTGCTCA	7860	False	NA	NA	False	NA	NA	NA	129534858	129519368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ES.24444.1	chr4	+	164	1	Intergenic	novelGene_20105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACTTTATAAATA	6919	False	NA	NA	False	NA	NA	NA	129563733	129563897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129563700_129563900
ES.24445.1	chr4	-	5904	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	-194	0	-194	0	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCTTTGGTTTGGAG	8640	False	NA	3	True	AATAAA	-22	NA	129566754	129537772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.10	chr4	-	3308	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	1	2401	1	1103	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGACCTGTTTTCAG	8835	False	NA	NA	False	AATAAA	-17	NA	129566559	129540173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.11	chr4	-	9089	9	NIC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	35	8	intron_retention	FALSE	canonical	3	124	junction_2	10.9658560997307	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTATGCTTGGATTATT	8869	False	NA	-21	True	NA	NA	NA	129566525	129541268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129547310_129547634_129547799_129548080_129548181_129548657_129549355_129550100_129555233_129566469
ES.24445.12	chr4	-	2179	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	28	3503	28	1	multi-exon	FALSE	canonical	3	106	junction_4	15.2943505832485	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAATCTTGTATGCTTG	8862	False	NA	-28	True	NA	NA	NA	129566532	129541275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.13	chr4	-	2770	2	FSM	ENSMUSG00000003731.14	ENSMUST00000146361.2	534	2	9	-2245	9	-1305	multi-exon	FALSE	canonical	3	152	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCCAGGCCAGAGAC	8843	False	NA	NA	False	NA	NA	NA	129566551	129552544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129555233_129566469
ES.24445.2	chr4	-	8199	11	NIC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	35	-1	intron_retention	FALSE	canonical	3	124	junction_2	12.9726635661301	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTTCTTTGGTTTGGA	8869	False	NA	2	True	AATAAA	-21	NA	129566525	129537773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129547799_129548080_129548181_129548657_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.3	chr4	-	5570	15	NNC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9330272679238	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCTTCTTTGGTTTG	8865	False	NA	0	True	AATAAA	-19	NA	129566529	129537775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129537966_129538071_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.4	chr4	-	5443	12	NIC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	21	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	42.7090870389719	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCTTCTTTGGTTTG	8855	False	NA	0	True	AATAAA	-19	NA	129566539	129537775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24445.5	chr4	-	7999	11	NNC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	35	-5	intron_retention	FALSE	canonical	1	3	junction_10	43.9846564156184	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	8869	False	NA	-2	True	AATAAA	-17	NA	129566525	129537777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555231_129566469
ES.24445.6	chr4	-	5471	13	NIC	ENSMUSG00000003731.14	novel	5710	14	NA	NA	55	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41.893714723492	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGTT	8889	False	NA	-2	True	AATAAA	-17	NA	129566505	129537777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129541973_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ES.24446.1	chr4	+	167	1	Intergenic	novelGene_20106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACAAACCACAG	NA	False	NA	NA	False	NA	NA	NA	129567830	129567997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129567800_129568000
ES.24446.2	chr4	+	329	1	Intergenic	novelGene_20107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	129567832	129568161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129567800_129568200
ES.24447.1	chr4	+	3730	1	Antisense	novelGene_ENSMUSG00000028790.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCAGTTTACTTTCAA	NA	False	NA	NA	False	NA	NA	NA	129597297	129601027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_129597300_129601000
ES.24448.1	chr4	+	1375	1	Intergenic	novelGene_20110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATCTTTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	129626964	129628339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129627000_129628300
ES.24449.10	chr4	-	1746	5	NNC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	-8903	-1039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	303.77407312014	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGATGAATTGT	7381	False	NA	NA	False	AATAAA	-21	NA	129616516	129608650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129609980_129612875_129612935_129613822_129613900_129614444_129614647_129616437
ES.24449.12	chr4	-	2645	10	NNC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	5	-1040	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.812020819489	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAATGTGATGAATTG	4986	False	NA	NA	False	AATAAA	-20	NA	129636084	129608651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129609108_129609155_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.13	chr4	-	3557	8	NIC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	38	-1040	intron_retention	FALSE	canonical	3	582	junction_7	66.8397413251141	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAATGTGATGAATTG	5019	False	NA	NA	False	AATAAA	-20	NA	129636051	129608651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129609980_129612875_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.14	chr4	-	4512	8	NIC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	18	-1040	intron_retention	FALSE	canonical	3	582	junction_7	66.005874815838	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAATGTGATGAATTG	4999	False	NA	NA	False	AATAAA	-20	NA	129636071	129608651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129621465_129623993_129624119_129635571
ES.24449.17	chr4	-	2010	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	3	1725	3	-1725	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACATGGCTGTTGAA	4984	False	NA	-92	True	AAAACA	-9	NA	129636086	129609336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.18	chr4	-	1770	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	3	1965	3	-1965	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCACAAACATG	4984	False	NA	NA	False	AATAAA	-14	NA	129636086	129609576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.19	chr4	-	180	1	Intergenic	novelGene_20109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAAAGGAAT	8216	False	NA	NA	False	NA	NA	NA	129610877	129610697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129610700_129610900
ES.24449.20	chr4	-	4530	1	NIC	ENSMUSG00000028790.14	novel	2600	12	NA	NA	-11072	-6544	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCAGGGCTATACAGAG	5212	False	NA	NA	False	NA	NA	NA	129618685	129614155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129614200_129618700
ES.24449.21	chr4	-	1872	4	ISM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	28	10764	28	4352	5prime_fragment	FALSE	canonical	3	582	junction_3	4.18993502999218	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTTCTGTATCC	5009	False	NA	NA	False	NA	NA	NA	129636061	129618375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.3	chr4	-	1791	10	NIC	ENSMUSG00000053730.16	novel	1851	10	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	10.3899286467209	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTGTCCTGTGA	4604	False	NA	NA	False	AAAAAG	-19	NA	129590576	129570149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586428_129586467_129586858_129587079_129587678_129587806_129590507
ES.24449.4	chr4	-	172	1	Intergenic	novelGene_20108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGGGGGAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	129584155	129583983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129584000_129584200
ES.24449.5	chr4	-	2810	10	NNC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	-77	12713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.812020819489	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAACAACAACAAAATATAT	4897	False	NA	NA	False	AAAACA	-3	NA	129636173	129584243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129584269_129608648_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.6	chr4	-	5592	2	NNC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	-82	-3805	intron_retention	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTCTAGCAACAGGAACA	6575	False	NA	NA	False	NA	NA	NA	129607695	129601423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129601499_129602178
ES.24449.7	chr4	-	3756	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	-6	-12	1	12	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATGCTGCCGCATAAAT	4975	False	NA	NA	False	AATAAA	-22	NA	129636095	129607599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.8	chr4	-	2790	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	-84	1032	-77	-1032	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGAATTGTCATTTTT	4897	False	NA	NA	False	AATAAA	-28	NA	129636173	129608643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ES.24449.9	chr4	-	2744	10	NNC	ENSMUSG00000028790.14	novel	3738	9	NA	NA	5	-1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	280.578546912722	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4986	False	NA	NA	False	AATAAA	-23	NA	129636084	129608648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129624703_129624752_129635571
ES.2445.1	chr10	+	3093	1	Intergenic	novelGene_1862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCCTGTGAAGAAACCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21628783	21631876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_21628800_21631900
ES.24450.1	chr4	-	155	1	Intergenic	novelGene_20111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	5693	False	NA	NA	False	NA	NA	NA	129656770	129656615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129656600_129656800
ES.24451.1	chr4	-	206	1	Intergenic	novelGene_20112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTTAAAGTCCTA	4851	False	NA	NA	False	NA	NA	NA	129667936	129667730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129667700_129667900
ES.24452.1	chr4	+	159	1	Intergenic	novelGene_20113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129674907	129675066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129674900_129675100
ES.24453.1	chr4	-	211	1	Intergenic	novelGene_20114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATAGCTTCTTCCTGT	4582	False	NA	NA	False	NA	NA	NA	129680158	129679947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129679900_129680200
ES.24454.1	chr4	-	152	1	Intergenic	novelGene_20115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1393	False	NA	NA	False	NA	NA	NA	129683347	129683195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129683200_129683300
ES.24455.1	chr4	-	298	1	Intergenic	novelGene_20116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAGAAAAAGAA	1906	False	NA	NA	False	NA	NA	NA	129694948	129694650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129694600_129694900
ES.24456.1	chr4	-	2071	3	Intergenic	novelGene_20117	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTCTCTTCAAGAAG	NA	False	NA	NA	False	AAAACA	-4	NA	129697354	129694989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129696026_129696244_129696689_129696763
ES.24456.2	chr4	-	170	1	Intergenic	novelGene_20118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	614	False	NA	NA	False	NA	NA	NA	129696240	129696070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129696100_129696200
ES.24457.1	chr4	-	175	1	Intergenic	novelGene_20119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	129699971	129699796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129699800_129700000
ES.24458.1	chr4	-	184	1	Intergenic	novelGene_20120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATTAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	129704534	129704350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129704400_129704500
ES.24459.1	chr4	+	3688	7	NIC	ENSMUSG00000028788.15	novel	658	3	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1284.07095684866	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACAGTTCATGTTTGCT	NA	False	NA	39	True	AATAAA	-40	NA	129704981	129743795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129705201_129705917_129706098_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.10	chr4	+	1538	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-23	1500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129713990	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714135_129714288_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.11	chr4	+	3544	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-22	124	-22	-124	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATTGCTAACTGAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	129713991	129743647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.12	chr4	+	3535	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	1221.62934231296	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	14	True	AATAAA	-15	NA	129713992	129743770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129740257_129740333_129741506
ES.24459.13	chr4	+	3368	6	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1321.60644671551	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129713997	129743768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714106_129714321_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129741506
ES.24459.14	chr4	+	1467	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-14	1500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1184.54867167017	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129713999	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714106_129714321_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.16	chr4	+	3477	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	1183.22235395081	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714001	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714110_129714290_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.17	chr4	+	1494	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	1500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714002	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714132_129714317_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.18	chr4	+	3463	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	1182.69223243694	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714002	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714097_129714290_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.19	chr4	+	1856	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	-1606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	-56	True	NA	NA	NA	129714002	129742165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714094_129714288_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.2	chr4	+	3582	8	NNC	ENSMUSG00000028788.15	novel	658	3	NA	NA	445	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1347.56094103232	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGTGAATTTCTTCC	NA	False	NA	13	True	AATAAA	-14	NA	129705459	129743769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129705501_129705917_129706098_129716609_129716708_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.20	chr4	+	3333	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	-130	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_1	1182.69223243694	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGAAGTATTGCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	129714002	129743641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714097_129714290_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.21	chr4	+	1567	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	1518	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	1221.62934231296	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGGGATTAATTTAGT	NA	False	NA	NA	False	AATAAA	-25	NA	129714002	129741812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129740257_129740333_129741506
ES.24459.22	chr4	+	3484	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129714002	129743768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714119_129714288_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.23	chr4	+	1854	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-10	1500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1285.00929525389	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714003	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714395_129732436_129732612_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.24	chr4	+	3103	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-10	-478	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	1307.86973739742	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAGACTCAAGATCAAA	NA	False	NA	NA	False	AATAGA	-8	NA	129714003	129743293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129741506
ES.24459.25	chr4	+	3549	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-8	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTCCCCACTCCTAA	NA	False	NA	23	True	AATAAA	-24	NA	129714005	129743779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714132_129714244_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.26	chr4	+	3281	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-7	372	-7	-372	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	129714006	129743399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.27	chr4	+	1912	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-7	-1610	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	1221.62934231296	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGGAAAAAAAAAAAAAAAC	NA	False	NA	-60	True	NA	NA	NA	129714006	129742161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129740257_129740333_129741506
ES.24459.28	chr4	+	3488	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129714006	129743768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714128_129714289_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.29	chr4	+	1846	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-5	-1606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	-56	True	NA	NA	NA	129714008	129742165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714107_129714305_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.3	chr4	+	3857	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-182	-29	-182	4	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCATGTTTGCTCTCCT	NA	False	NA	44	True	AATAAA	-45	NA	129713831	129743800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.30	chr4	+	3216	2	ISM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-2	8168	-2	2444	5prime_fragment	FALSE	canonical	3	460	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-18	NA	129714011	129735603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129714395_129732770
ES.24459.31	chr4	+	3530	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTGTGAATTTCTT	NA	False	NA	11	True	AATAAA	-12	NA	129714011	129743767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714143_129714256_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.32	chr4	+	3569	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	1307.86973739742	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129714012	129743768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129741506
ES.24459.33	chr4	+	3325	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	2	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGTATTGCTAACTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	129714015	129743645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714107_129714299_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.35	chr4	+	1655	2	NNC	ENSMUSG00000028788.15	novel	339	2	NA	NA	2	9549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGGGTGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	129714015	129715863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714106_129714298
ES.24459.37	chr4	+	1724	2	NNC	ENSMUSG00000028788.15	novel	339	2	NA	NA	6	9532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	129714019	129715846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714132_129714234
ES.24459.38	chr4	+	1495	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	6	1500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714019	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714128_129714295_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.39	chr4	+	1893	9	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	6	1500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1360.80895058785	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714019	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714395_129717864_129717928_129718972_129719006_129727372_129727507_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.4	chr4	+	1773	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-58	1931	-58	1546	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTCCTAGTTTTGAT	NA	False	NA	NA	False	AAAAAG	-32	NA	129713955	129741840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.40	chr4	+	3422	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGTGAATTTCTTCC	NA	False	NA	13	True	AATAAA	-14	NA	129714019	129743769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714106_129714321_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.43	chr4	+	1798	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	8	1503	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1284.30518396351	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAGAAAGGAAA	NA	False	NA	NA	False	AATAAA	-10	NA	129714021	129741797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714395_129727372_129727507_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.47	chr4	+	3563	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	14	True	AATAAA	-15	NA	129714030	129743770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714186_129714250_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.48	chr4	+	3321	6	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	28	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1093.4003109566	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTAATGTTAATTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	129714041	129743567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714399_129732867_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.49	chr4	+	3541	6	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1092.20866138298	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTGAATTTCTTC	NA	False	NA	12	True	AATAAA	-13	NA	129714042	129743768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714322_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.5	chr4	+	1897	1	Genic_Genomic	ENSMUSG00000028788.15	novel	NA	NA	NA	NA	-47	9549	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGGGTGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	129713966	129715863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_129714000_129715900
ES.24459.50	chr4	+	3379	4	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1079.0135412599	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714056	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714395_129732770_129733472_129740257_129740333_129741506
ES.24459.51	chr4	+	1814	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	43	-1606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	-56	True	NA	NA	NA	129714056	129742165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714106_129714288_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.52	chr4	+	1402	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	208	1500	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1184.54867167017	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714221	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714263_129714321_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.53	chr4	+	3357	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	-2	27	-2	-2	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGTGAATTTCTTCC	NA	False	NA	13	True	AATAAA	-14	NA	129714498	129743769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.54	chr4	+	1360	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	20	2002	7	1500	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129714520	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.55	chr4	+	1731	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	20	1631	7	-1606	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	-56	True	NA	NA	NA	129714520	129742165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.56	chr4	+	3052	5	NIC	ENSMUSG00000028788.15	novel	3382	6	NA	NA	35	-126	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	1324.17660736776	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGTATTGCTAACTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	129714548	129743645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129714593_129732770_129733472_129736462_129736556_129740257_129740333_129741506
ES.24459.57	chr4	+	3373	6	NNC	ENSMUSG00000028788.15	novel	658	3	NA	NA	191	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1093.4003109566	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTTTTTGTGAATTTC	NA	False	NA	9	True	AATAAA	-10	NA	129714704	129743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714819_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.58	chr4	+	7468	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	12090	2002	-6353	1500	3prime_fragment	FALSE	canonical	3	2484	junction_4	143.886239786854	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129726590	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.59	chr4	+	147	1	Intergenic	novelGene_20123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAACCCAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	129727749	129727896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129727700_129727900
ES.24459.6	chr4	+	2142	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-41	1545	-41	-1545	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGGCGCATATATTCT	NA	False	NA	5	True	NA	NA	NA	129713972	129742226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.60	chr4	+	5585	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	15950	25	-2493	0	3prime_fragment	FALSE	canonical	3	2484	junction_4	143.886239786854	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129730450	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.61	chr4	+	1320	1	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-1179	59	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTAGTTGGATTTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	129731764	129733084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129731800_129733100
ES.24459.62	chr4	+	2565	4	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	21960	26	3517	-1	3prime_fragment	FALSE	canonical	3	2484	junction_3	144.68893837778	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGAATTTCTTCCC	NA	False	NA	14	True	AATAAA	-15	NA	129736460	129743770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.63	chr4	+	2342	2	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	25755	25	7312	0	3prime_fragment	FALSE	canonical	3	2484	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129740255	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129740333_129741506
ES.24459.64	chr4	+	2910	1	Genic_Genomic	ENSMUSG00000028788.15	novel	NA	NA	NA	NA	9060	1117	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCATAAAGTAGCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	129742003	129744913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_129742000_129744900
ES.24459.7	chr4	+	1505	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-35	1500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1184.54867167017	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAGAAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	129713978	129741794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714110_129714308_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.8	chr4	+	3469	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-29	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1184.54867167017	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGTGAATTTCTTCC	NA	False	NA	13	True	AATAAA	-14	NA	129713984	129743769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714018_129714221_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.24459.9	chr4	+	3707	7	NNC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1284.77461274558	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129713985	129743771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129714395_129718972_129719006_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ES.2446.1	chr10	+	2701	1	Antisense	novelGene_ENSMUSG00000097107.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTGTCAATGCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	21705479	21708180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_21705500_21708200
ES.24460.1	chr4	-	6277	1	Intergenic	novelGene_20121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACGCTTCCGAATACTT	NA	False	NA	NA	False	ATTAAA	-43	NA	129721297	129715020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129715000_129721300
ES.24460.2	chr4	-	6337	1	Intergenic	novelGene_20122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAGGAAAAGCATGAAAC	NA	False	NA	NA	False	NA	NA	NA	129727410	129721073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129721100_129727400
ES.24461.1	chr4	-	2671	1	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTGGAGGCTACAGAA	8856	False	NA	NA	False	NA	NA	NA	129733437	129730766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_129730800_129733400
ES.24461.2	chr4	-	4949	2	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTACTTCTGAGGCCA	2407	False	NA	NA	False	ATTAAA	-32	NA	129739886	129732943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_129735600_129737593
ES.24462.1	chr4	+	1298	1	Intergenic	novelGene_20124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	129744980	129746278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129745000_129746300
ES.24463.1	chr4	+	777	2	Intergenic	novelGene_20125	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	5408	False	NA	NA	False	NA	NA	NA	129777963	129779186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129778259_129778704
ES.24463.2	chr4	+	293	1	Intergenic	novelGene_20126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTGTATGACT	6452	False	NA	NA	False	NA	NA	NA	129779007	129779300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_129779000_129779300
ES.24464.1	chr4	-	311	1	Intergenic	novelGene_20127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	129780013	129779702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129779700_129780000
ES.24465.1	chr4	-	183	1	Intergenic	novelGene_20128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAAGGAGGAGG	6328	False	NA	0	True	NA	NA	NA	129817009	129816826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_129816800_129817000
ES.24466.1	chr4	+	1924	3	ISM	ENSMUSG00000085389.8	ENSMUST00000147634.8	564	4	352	-1610	-82	1473	3prime_fragment	FALSE	canonical	2	2	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACATTTAGTGACCCT	5342	False	NA	12	True	AATAAA	-14	NA	129854518	129858923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129854602_129854991_129855074_129857164
ES.24466.2	chr4	+	749	2	ISM	ENSMUSG00000085389.8	ENSMUST00000147634.8	564	4	397	1611	-37	-1611	internal_fragment	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTCCAGTGTAGAATA	5387	False	NA	NA	False	AATAAA	-10	NA	129854563	129855702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_129854602_129854991
ES.24467.1	chr4	+	5452	27	NIC	ENSMUSG00000028782.15	novel	5170	28	NA	NA	-104	-1	intron_retention	TRUE	canonical	2	10	junction_2	6.9810605999799	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	NA	False	NA	8	True	AATAAA	-14	NA	129878558	129916425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.10	chr4	+	5075	29	NIC	ENSMUSG00000028782.15	novel	4982	29	NA	NA	-104	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_21	8.5913459067713	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGCTGCCCGGATT	NA	False	NA	5	True	AATAAA	-11	NA	129878852	129916422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129908727_129908827_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.11	chr4	+	4973	28	NNC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-101	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	8.19431366290281	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	NA	False	NA	8	True	AATAAA	-14	NA	129878855	129916425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129879101_129885846_129886673_129898817_129898902_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915358_129915455_129915942
ES.24467.12	chr4	+	5194	30	FSM	ENSMUSG00000028782.15	ENSMUST00000106017.8	5104	30	-92	2	-92	-2	multi-exon	FALSE	canonical	0	0	junction_22	9.28438270365195	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	NA	False	NA	7	True	AATAAA	-13	NA	129878864	129916424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910426_129910490_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.14	chr4	+	5178	30	NIC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_22	8.82367909224655	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878918	129916426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129908727_129908827_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.16	chr4	+	3867	25	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3170	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	5.46055934253382	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	1453	False	NA	8	True	AATAAA	-14	NA	129900498	129916425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.20	chr4	+	4120	24	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3127	0	intron_retention	FALSE	canonical	2	12	junction_13	5.57031016977723	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1496	False	NA	9	True	AATAAA	-15	NA	129900541	129916426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.21	chr4	+	5761	24	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3126	-1	intron_retention	FALSE	canonical	2	12	junction_14	5.57641536451333	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	1497	False	NA	8	True	AATAAA	-14	NA	129900542	129916425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129915048_129915355_129915455_129915942
ES.24467.23	chr4	+	3352	23	NNC	ENSMUSG00000028782.15	novel	5170	28	NA	NA	-2050	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.68813618613308	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	2573	False	NA	7	True	AATAAA	-13	NA	129901618	129916424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903972_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.24	chr4	+	3481	11	NNC	ENSMUSG00000028782.15	novel	5170	28	NA	NA	-140	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	9.4847245611035	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTGCCCGGATTGTT	1064	False	NA	8	True	AATAAA	-14	NA	129907288	129916425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129914638_129915011_129915048_129915355_129915455_129915942
ES.24467.3	chr4	+	5662	28	NNC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	-38	-3	intron_retention	FALSE	canonical	2	5	junction_4	8.10493592094218	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGCTGCCCGGATTG	NA	False	NA	6	True	AATAAA	-12	NA	129878624	129916423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915358_129915455_129915942
ES.24467.5	chr4	+	5073	27	NNC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	10.5850318567439	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	NA	False	NA	7	True	AATAAA	-13	NA	129878661	129916424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129879101_129885846_129886673_129898817_129898902_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908177_129908343_129908430_129910854_129911027_129911321_129911418_129912453_129913074_129915011_129915048_129915358_129915455_129915989
ES.24467.6	chr4	+	5170	28	FSM	ENSMUSG00000028782.15	ENSMUST00000120204.8	5170	28	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	6.85835527200487	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878662	129916426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.7	chr4	+	5335	29	NIC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	7.28527659749723	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878662	129916426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24467.9	chr4	+	5150	29	NNC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	-123	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.31544849502836	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGCTGCCCGGATTGT	NA	False	NA	7	True	AATAAA	-13	NA	129878833	129916424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899194_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ES.24468.1	chr4	+	2110	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	-193	-2	-193	2	multi-exon	FALSE	canonical	0	0	junction_1	92.1767866656242	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGACTGTGTGTCCG	4087	False	NA	28	True	AATAAA	-35	NA	129996157	130021930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.10	chr4	+	2449	1	NIC	ENSMUSG00000028779.17	novel	1915	6	NA	NA	18112	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATGTTTTCCACCAT	NA	False	NA	7	True	AATAAA	-14	NA	130019460	130021909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130019500_130021900
ES.24468.2	chr4	+	2007	7	NNC	ENSMUSG00000028779.17	novel	1915	6	NA	NA	53	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.061357733892	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCATGTTTTCCACCA	4333	False	NA	6	True	AATAAA	-13	NA	129996403	130021908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129996521_129996902_129997068_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.3	chr4	+	1988	7	NNC	ENSMUSG00000028779.17	novel	1915	6	NA	NA	98	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	104.338258669686	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGACTGTGTGTCCG	4378	False	NA	28	True	AATAAA	-35	NA	129996448	130021930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129996521_130000150_130000320_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.4	chr4	+	1854	7	NNC	ENSMUSG00000028779.17	novel	1915	6	NA	NA	111	-18	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	105.484069360681	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATGTTTTCCACCAT	4391	False	NA	7	True	AATAAA	-14	NA	129996461	130021909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129996521_130000150_130000320_130001255_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.5	chr4	+	1894	6	NNC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	469	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.1767866656242	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTGACTGTGTGTCC	4749	False	NA	27	True	AATAAA	-34	NA	129996819	130021929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_129997068_130001255_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.6	chr4	+	4314	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	-2782	19	2216	-19	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCCATGTTTTCCACCA	6496	False	NA	6	True	AATAAA	-13	NA	129998566	130021908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ES.24468.7	chr4	+	5540	3	NIC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	50	-17	intron_retention	FALSE	canonical	3	185	junction_1	32.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATGTTTTCCACCATG	9328	False	NA	8	True	AATAAA	-15	NA	130001398	130021910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130001444_130014960_130019591_130021045
ES.24468.8	chr4	+	1923	4	NIC	ENSMUSG00000028779.17	novel	1551	5	NA	NA	62	-1	intron_retention	FALSE	canonical	3	185	junction_1	28.7556757682529	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTTCTTGACTGTGTG	9340	False	NA	24	True	AATAAA	-31	NA	130001410	130021926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130001444_130014960_130015235_130018855_130019591_130021045
ES.24468.9	chr4	+	3260	3	ISM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	15416	13	15416	-13	3prime_fragment	FALSE	canonical	3	218	junction_1	16	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTCCACCATGACTT	NA	False	NA	12	True	AATAAA	-19	NA	130016764	130021914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130019012_130019446_130019591_130021045
ES.24469.1	chr4	-	1509	5	ISM	ENSMUSG00000028778.16	ENSMUST00000164887.3	1251	7	1704	-620	1704	-4	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTCTCTTTCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	130029717	130024013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_130024798_130026426_130026549_130027487_130027715_130029062_130029179_130029457
ES.2447.1	chr10	-	2238	1	Intergenic	novelGene_1863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTTAACTAGGATTTAA	NA	False	NA	NA	False	NA	NA	NA	21705362	21703124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21703100_21705400
ES.2447.2	chr10	-	3300	4	NNC	ENSMUSG00000097107.2	novel	1818	5	NA	NA	-814	1855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGTAGCCTACTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	21721564	21704542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_21707333_21720324_21720372_21720744_21720881_21721237
ES.2447.3	chr10	-	1716	6	NNC	ENSMUSG00000097107.2	novel	1818	5	NA	NA	-2766	-3525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.894427190999916	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAGAAGCATCCTGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	21723516	21709922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_21711009_21712281_21712342_21720324_21720372_21720744_21720881_21721237_21721340_21723231
ES.24470.1	chr4	-	7033	6	NIC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	0	3	intron_retention	FALSE	canonical	3	185	junction_5	30.8843002187195	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGGAGTCTTCAAGG	NA	False	NA	NA	False	AATAAA	-22	NA	130068595	130059391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130060142_130060694_130061095_130061197_130061388_130061490_130066789_130067685_130068001_130068515
ES.24470.10	chr4	-	5421	11	NIC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	45	-2	intron_retention	FALSE	canonical	3	185	junction_10	28.2214457460988	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130068540	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130066789_130067685_130068001_130068515
ES.24470.11	chr4	-	2198	9	NIC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	21	-2	intron_retention	FALSE	canonical	3	185	junction_8	30.6448914992369	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130068564	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130060142_130060694_130060819_130061048_130061095_130061197_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ES.24470.12	chr4	-	1593	11	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	1077	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	78.2777746234523	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130067407	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067367
ES.24470.13	chr4	-	2069	12	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	73.2912225698625	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130068564	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060294_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ES.24470.14	chr4	-	1865	11	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	477	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.3430915907714	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130068007	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063113_130063197_130066724_130066789_130067685
ES.24470.15	chr4	-	1946	12	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	74.8282882823918	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACAGTGTCTGGGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	130068509	130059399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068430
ES.24470.17	chr4	-	4141	8	NIC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	-2475	-3	intron_retention	FALSE	canonical	3	223	junction_5	20.4090816119907	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACAGTGTCTGGGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	130065752	130059399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103
ES.24470.18	chr4	-	1367	8	NNC	ENSMUSG00000028776.15	novel	1847	11	NA	NA	1117	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	91.9547359812846	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACAGTGTCTGGGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	130062160	130059399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062073
ES.24470.2	chr4	-	1985	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	-31	-2	-13	2	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTGGGAGTCTTCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	130068626	130059392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ES.24470.20	chr4	-	2094	13	NNC	ENSMUSG00000028776.15	novel	1976	12	NA	NA	-305	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	93.0792299901302	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACAGTGTCTGGGAG	NA	False	NA	NA	False	AATAAA	-13	NA	130069220	130059400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694_130068867_130069164
ES.24470.3	chr4	-	2212	13	NNC	ENSMUSG00000028776.15	novel	1976	12	NA	NA	-592	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	92.7093352005791	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGGGAGTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	130069507	130059394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694_130068867_130069339
ES.24470.4	chr4	-	1902	12	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.5598389106167	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTCTGGGAGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	130068595	130059396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061383_130061533_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ES.24470.7	chr4	-	1677	10	NNC	ENSMUSG00000028776.15	novel	1952	12	NA	NA	-2521	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.2611019187616	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130065798	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130065610
ES.24470.8	chr4	-	1386	6	NIC	ENSMUSG00000028776.15	novel	1847	11	NA	NA	1429	-2	intron_retention	FALSE	canonical	3	223	junction_5	24.3885218904303	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACAGTGTCTGGGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	130061848	130059398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061642_130061722
ES.24471.1	chr4	-	315	1	Intergenic	novelGene_20129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	130114979	130114664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130114700_130115000
ES.24472.1	chr4	-	179	1	Intergenic	novelGene_20130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCAACAAC	6753	False	NA	NA	False	NA	NA	NA	130132402	130132223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130132200_130132400
ES.24473.1	chr4	+	194	1	Intergenic	novelGene_20131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	130149684	130149878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130149700_130149900
ES.24474.1	chr4	-	1643	9	NNC	ENSMUSG00000023232.18	novel	1881	10	NA	NA	10340	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4.18330013267038	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTCCCATGTCTTG	9385	False	NA	-3	True	AATAAA	-15	NA	130158671	130147289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158613
ES.24474.2	chr4	-	1865	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	9	4	9	-4	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCCTCCCATGTCT	7805	False	NA	-5	True	AATAAA	-13	NA	130169370	130147291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
ES.24474.3	chr4	-	2050	12	NIC	ENSMUSG00000023232.18	novel	1878	10	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	5.08603662934522	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCCTCCCATGTCT	7822	False	NA	-5	True	AATAAA	-13	NA	130169353	130147291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130166670_130166717_130168607_130168764_130169250
ES.24474.4	chr4	-	163	1	Intergenic	novelGene_20132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAAATCTT	9918	False	NA	NA	False	NA	NA	NA	130167257	130167094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130167100_130167300
ES.24475.1	chr4	+	180	1	Intergenic	novelGene_20133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTATCCTCAG	NA	False	NA	NA	False	NA	NA	NA	130192276	130192456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130192300_130192500
ES.24476.1	chr4	-	1573	3	Genic_Genomic	ENSMUSG00000073752.3	novel	2118	1	NA	NA	1221	16382	multi-exon	FALSE	canonical	2	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTTCCAG	NA	False	NA	NA	False	NA	NA	NA	130201245	130183966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_130185283_130190503_130190628_130201112
ES.24477.1	chr4	+	619	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	-613	-1	at_least_one_novel_splicesite	FALSE	canonical	1	74	junction_1	2063.1543810389	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130201774	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130201828_130206083_130206257_130207746_130207849_130208964
ES.24477.10	chr4	+	6720	1	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTCTGTCTTTGGT	NA	False	NA	27	True	AATAAA	-16	NA	130202532	130209252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130202500_130209300
ES.24477.11	chr4	+	574	3	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	146	-1	combination_of_known_splicesites	FALSE	canonical	2	36	junction_2	2332	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130202533	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130202644_130206083_130206257_130208964
ES.24477.12	chr4	+	5601	2	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	146	-6	intron_retention	FALSE	canonical	3	4337	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGTTGTCTGTCTTTG	NA	False	NA	25	True	AATAAA	-14	NA	130202533	130209250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130207849_130208964
ES.24477.2	chr4	+	1030	5	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	-51	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	2159.9895109699	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTTGTCTGTCTTTGG	NA	False	NA	26	True	AATAAA	-15	NA	130202336	130209251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130202644_130203234_130203396_130206083_130206257_130207746_130207849_130208964
ES.24477.3	chr4	+	798	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	27	-2	27	2	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTTGGTCCTCCT	NA	False	NA	33	True	AATAAA	-22	NA	130202414	130209258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ES.24477.4	chr4	+	4119	3	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	143	-1	intron_retention	FALSE	canonical	3	4337	junction_2	109.5	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130202530	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130206257_130207746_130207849_130208964
ES.24477.5	chr4	+	3285	2	ISM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	143	1	143	-1	intron_retention	FALSE	canonical	3	4700	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130202530	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130202644_130206083
ES.24477.6	chr4	+	5229	2	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	143	-7	intron_retention	FALSE	canonical	3	4556	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCAGTTGTCTGTCTTT	NA	False	NA	24	True	AATAAA	-13	NA	130202530	130209249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130206257_130207746
ES.24477.7	chr4	+	1793	3	ISM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	145	1	145	-1	intron_retention	FALSE	canonical	3	4556	junction_2	72	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130202532	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130202644_130206083_130206257_130207746
ES.24477.8	chr4	+	664	4	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2182.45203587362	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCCAGTTGTCTGTCTT	NA	False	NA	23	True	AATAAA	-12	NA	130202532	130209248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130202644_130206083_130206257_130207746_130207849_130208970
ES.24477.9	chr4	+	2167	3	NIC	ENSMUSG00000028773.9	novel	823	4	NA	NA	145	-1	intron_retention	FALSE	canonical	3	4337	junction_2	181.5	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTCTTTGGTCCT	NA	False	NA	30	True	AATAAA	-19	NA	130202532	130209255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130202644_130206083_130207849_130208964
ES.24478.1	chr4	+	6472	2	Antisense	novelGene_ENSMUSG00000028772.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	130220028	130228735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_130221134_130223368
ES.24479.1	chr4	+	157	1	Intergenic	novelGene_20135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	130235071	130235228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130235100_130235200
ES.2448.1	chr10	+	2937	14	FSM	ENSMUSG00000019970.16	ENSMUST00000120509.8	3096	14	166	-7	-19	2	multi-exon	FALSE	canonical	0	0	junction_1	401.990785610785	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21758248	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21758607_21804240_21804451_21845347_21845424_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.11	chr10	+	3470	12	NNC	ENSMUSG00000019970.16	novel	859	8	NA	NA	6350	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	277.858487081059	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCATAAATTGTGTCA	NA	False	NA	6	True	AATAAA	-12	NA	21860920	21875790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21862107_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.12	chr10	+	3206	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	-725	-5	-725	0	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21867396	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.13	chr10	+	3026	10	NIC	ENSMUSG00000019970.16	novel	2476	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_1	292.175408164004	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21868121	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21868307_21870864_21871449_21871692_21871798_21871924_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.14	chr10	+	3231	12	FSM	ENSMUSG00000019970.16	ENSMUST00000092673.11	2576	12	-647	-8	-647	1	multi-exon	FALSE	canonical	3	12	junction_1	274.769775907151	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	14	True	AATAAA	-20	NA	21869141	21875798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21870081_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.15	chr10	+	2817	12	NNC	ENSMUSG00000019970.16	novel	2576	12	NA	NA	-234	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	370.322307686491	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21869554	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21870081_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872865_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.16	chr10	+	4700	3	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	-21	0	intron_retention	FALSE	canonical	3	881	junction_2	26.5	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870543	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870941_21871372_21871798_21871924
ES.2448.17	chr10	+	2439	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870581	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.18	chr10	+	3412	9	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	3	0	2	intron_retention	FALSE	canonical	3	717	junction_1	92.9548781667751	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240
ES.2448.2	chr10	+	2807	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	-200	-5	-200	0	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21854370	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.20	chr10	+	2298	11	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	9	junction_7	286.665379842073	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870581	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.22	chr10	+	4071	6	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	717	junction_1	94.058705072949	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872254_21872457
ES.2448.23	chr10	+	5209	1	NIC	ENSMUSG00000019970.16	novel	3096	14	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCATAAATTGTGTCA	NA	False	NA	6	True	AATAAA	-12	NA	21870581	21875790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870600_21875800
ES.2448.24	chr10	+	2793	10	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	717	junction_1	97.3424653250346	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871798_21871924_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.26	chr10	+	2758	10	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	-5	intron_retention	FALSE	canonical	1	9	junction_7	300.105578129916	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870581	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21873240_21873953_21874058_21874149_21874558
ES.2448.27	chr10	+	2846	11	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	3	0	2	intron_retention	FALSE	canonical	3	717	junction_1	91.1539357351069	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058
ES.2448.28	chr10	+	2576	11	ISM	ENSMUSG00000019970.16	ENSMUST00000092673.11	2576	12	793	-9	0	2	3prime_fragment	FALSE	canonical	3	813	junction_6	62.1450722101117	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870581	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.29	chr10	+	2899	11	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	717	junction_1	92.6728115468609	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870581	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873953_21874058_21874149_21874558
ES.2448.3	chr10	+	1840	1	Genic_Genomic	ENSMUSG00000019970.16	novel	NA	NA	NA	NA	-55	-9946	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21854515	21856355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_21854500_21856400
ES.2448.30	chr10	+	4393	4	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	17	12	0	0	intron_retention	FALSE	canonical	3	717	junction_1	98.9489206049712	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCATAAATTGTGTCA	NA	False	NA	6	True	AATAAA	-12	NA	21870581	21875790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692
ES.2448.31	chr10	+	3500	8	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	717	junction_1	83.105293428989	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870582	21875802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21873337_21873796
ES.2448.32	chr10	+	4629	3	FSM	ENSMUSG00000019970.16	ENSMUST00000141218.8	347	3	3	-4285	3	-5	multi-exon	FALSE	canonical	3	717	junction_1	108.5	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870584	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21870725_21870864_21870941_21871372
ES.2448.33	chr10	+	4432	4	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	717	junction_1	119.9342412417	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAAATTGTGTCATG	NA	False	NA	8	True	AATAAA	-14	NA	21870584	21875792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21872254_21872457
ES.2448.35	chr10	+	2322	11	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	286.437008782036	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870585	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873796_21873953_21874058_21874149_21874558
ES.2448.36	chr10	+	4271	5	FSM	ENSMUSG00000019970.16	ENSMUST00000126560.2	688	5	-24	-3559	4	2	multi-exon	FALSE	canonical	3	717	junction_1	86.3376366366372	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870585	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924
ES.2448.37	chr10	+	4372	6	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	4	-5	intron_retention	FALSE	canonical	3	717	junction_1	95.771394476639	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870585	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457
ES.2448.38	chr10	+	4032	6	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	4	-5	intron_retention	FALSE	canonical	3	717	junction_1	101.57361862216	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870585	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21872009_21872121_21873002_21873240
ES.2448.39	chr10	+	2538	11	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	4	2	intron_retention	FALSE	canonical	3	717	junction_1	86.156601604288	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21870585	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21874149_21874558
ES.2448.40	chr10	+	3650	7	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	717	junction_1	91.7024172709386	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAAATTGTGTCATG	NA	False	NA	8	True	AATAAA	-14	NA	21870585	21875792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872254_21872457_21874149_21874558
ES.2448.41	chr10	+	4322	4	NIC	ENSMUSG00000019970.16	novel	859	8	NA	NA	7	-5	intron_retention	FALSE	canonical	3	934	junction_1	36.3532055746884	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21870588	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870941_21871372_21872254_21872457_21873002_21873240
ES.2448.42	chr10	+	2434	13	NNC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	7	18549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	269.1893695276	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAGACAAACCAGAATAAA	NA	False	NA	NA	False	NA	NA	NA	21870588	21894351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558_21875785_21894331
ES.2448.43	chr10	+	2790	9	NIC	ENSMUSG00000019970.16	novel	2456	12	NA	NA	81	1	intron_retention	FALSE	canonical	3	813	junction_5	68.464292700648	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	14	True	AATAAA	-20	NA	21870889	21875798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21870941_21871372_21871449_21871692_21871798_21871924_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058
ES.2448.44	chr10	+	2281	9	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	988	3	744	2	3prime_fragment	FALSE	canonical	3	813	junction_4	68.5784222623997	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTCATGTGTTAAC	NA	False	NA	15	True	AATAAA	-21	NA	21871552	21875799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.45	chr10	+	1584	4	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	2674	4	749	1	3prime_fragment	FALSE	canonical	3	935	junction_1	38.0555150040335	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGTCATGTGTTAA	NA	False	NA	14	True	AATAAA	-20	NA	21873238	21875798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21873337_21873796_21873953_21874058_21874149_21874558
ES.2448.46	chr10	+	2151	2	ISM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	2964	17	1039	-5	intron_retention	FALSE	canonical	3	1028	junction_1	0	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21873528	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_21873953_21874058
ES.2448.7	chr10	+	2694	11	NIC	ENSMUSG00000019970.16	novel	2602	12	NA	NA	2	-5	intron_retention	FALSE	canonical	3	251	junction_1	212.946096465749	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21854572	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21874149_21874558
ES.2448.8	chr10	+	3175	10	NIC	ENSMUSG00000019970.16	novel	2602	12	NA	NA	2	-5	intron_retention	FALSE	canonical	3	251	junction_1	229.434624487195	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTGCATAAATTG	NA	False	NA	1	True	AATAAA	-7	NA	21854572	21875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873953_21874058_21874149_21874558
ES.24480.1	chr4	-	2004	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	108.196837086652	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCCAGGCTGATGC	NA	False	NA	NA	False	AATAAA	-17	NA	130253748	130209175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130253668
ES.24480.10	chr4	-	1452	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-21	682	-21	214	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTCCTGGGCGACTTA	NA	False	NA	8	True	AAAAAG	-14	NA	130253757	130209857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.11	chr4	-	1375	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-22	194	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGGCTTTATTCCTAT	NA	False	NA	-12	True	CATAAA	-28	NA	130253758	130209877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
ES.24480.12	chr4	-	1300	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-10	194	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	108.196837086652	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGGCTTTATTCCTAT	NA	False	NA	-12	True	CATAAA	-28	NA	130253746	130209877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130253668
ES.24480.13	chr4	-	1517	9	NNC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-14	193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	122.276326408672	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGGCTTTATTCCTA	NA	False	NA	-13	True	CATAAA	-27	NA	130253750	130209878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130252271_130252365_130253668
ES.24480.14	chr4	-	1304	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	11	190	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	104.381378713936	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAAAAAGGCTTTATTC	NA	False	NA	-16	True	CATAAA	-24	NA	130253725	130209881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.15	chr4	-	1228	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-4	186	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTCCAAAAAGGCTTT	NA	False	NA	-20	True	CATAAA	-20	NA	130253740	130209885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
ES.24480.17	chr4	-	1297	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	11	805	11	91	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCTGCTTCCTGTCTG	NA	False	NA	-115	True	NA	NA	NA	130253725	130209980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.18	chr4	-	1007	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-14	-166	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGCGCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	130253750	130210237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
ES.24480.19	chr4	-	1018	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	2	1093	2	-197	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTGCAAGCGACCCCT	NA	False	NA	NA	False	NA	NA	NA	130253734	130210268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.2	chr4	-	2034	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	-6	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAACTGGGTCCAGGC	NA	False	NA	NA	False	AATAAA	-11	NA	130253721	130209181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
ES.24480.20	chr4	-	3151	2	Intergenic	novelGene_20134	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGGCTTATTATTTGG	4445	False	NA	NA	False	NA	NA	NA	130217892	130214615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130215228_130215353
ES.24480.21	chr4	-	1559	6	NIC	ENSMUSG00000028772.20	novel	286	3	NA	NA	3	1033	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	100.550484832247	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAGTGACATTATTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	130253733	130229615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130230738_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.22	chr4	-	1188	6	NIC	ENSMUSG00000028772.20	novel	286	3	NA	NA	1	660	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	100.550484832247	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACTGGCTGTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	130253735	130229988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130230738_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.23	chr4	-	1131	5	NIC	ENSMUSG00000028772.20	novel	286	3	NA	NA	0	660	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	121.442115841252	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACTGGCTGTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	130253736	130229988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130230738_130230870_130230963_130232276_130232378_130247928_130248050_130253668
ES.24480.24	chr4	-	5705	1	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	4853	2809	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGCAACATTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	130248856	130243151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130243200_130248900
ES.24480.3	chr4	-	2116	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-10	7	-10	-7	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGAACTGGGTCCAGG	NA	False	NA	NA	False	AATAAA	-10	NA	130253746	130209182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.4	chr4	-	1475	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-3	376	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	108.196837086652	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCGCTTTCCCTTGTAT	NA	False	NA	-2	True	CATAAA	-18	NA	130253739	130209695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130253668
ES.24480.5	chr4	-	1322	5	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	0	376	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	144.612413021843	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCGCTTTCCCTTGTAT	NA	False	NA	-2	True	CATAAA	-18	NA	130253736	130209695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130232276_130232378_130253668
ES.24480.6	chr4	-	1424	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-12	374	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACCGCTTTCCCTTGT	NA	False	NA	-4	True	CATAAA	-16	NA	130253748	130209697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
ES.24480.7	chr4	-	1542	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-9	374	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACCGCTTTCCCTTGT	NA	False	NA	-4	True	CATAAA	-16	NA	130253745	130209697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
ES.24480.8	chr4	-	1650	9	NNC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	-5	372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.186269175386	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGACCGCTTTCCCTT	NA	False	NA	-6	True	CATAAA	-14	NA	130253714	130209699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_130210602_130218006_130218090_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24480.9	chr4	-	1597	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	-10	526	-10	370	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGATGACCGCTTTCCC	NA	False	NA	-8	True	CATAAA	-12	NA	130253746	130209701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ES.24481.1	chr4	+	1607	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	-20	-3	-20	3	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTGTGACTTGGATT	NA	False	NA	25	True	ATTAAA	-26	NA	130253904	130283822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.10	chr4	+	2329	6	NNC	ENSMUSG00000074088.7	novel	1752	6	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	544.826063987398	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTTGTTAGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	130253956	130269368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130267134_130267212_130267692
ES.24481.11	chr4	+	3659	5	NNC	ENSMUSG00000074088.7	novel	1752	6	NA	NA	-25	-3039	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	481.853906801636	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130253961	130266330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130264953_130266047
ES.24481.13	chr4	+	3005	6	FSM	ENSMUSG00000074088.7	ENSMUST00000180577.2	1752	6	-24	-1229	-24	1229	multi-exon	FALSE	canonical	1	1	junction_4	544.581086707939	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTGTTTGTATTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	130253962	130270598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130267134_130267212_130268240
ES.24481.15	chr4	+	1631	11	NNC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	454.453352941751	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130253965	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130273707_130273794_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.16	chr4	+	1411	9	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	383.24060246143	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130253969	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.18	chr4	+	7602	8	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	1067	junction_6	53.4025910859565	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	False	NA	22	True	ATTAAA	-23	NA	130253996	130283819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130277308_130278274_130278358_130279746_130279809_130282367
ES.24481.19	chr4	+	220	1	Intergenic	novelGene_20136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTTTACGTTTTTATT	NA	False	NA	NA	False	AAAAAG	-4	NA	130259269	130259489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130259300_130259500
ES.24481.2	chr4	+	3412	8	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	6	2	intron_retention	FALSE	canonical	3	1067	junction_6	38.4240570901266	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130253930	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130278358_130279746_130279809_130282367
ES.24481.20	chr4	+	6810	4	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-6194	2	intron_retention	FALSE	canonical	3	1085	junction_2	61.8223260642949	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130272620	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130277308_130278274_130279809_130282367_130282472_130283336
ES.24481.3	chr4	+	1468	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	7	109	7	-109	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTCTGTTTTATTT	NA	False	NA	7	True	ATTAAA	-14	NA	130253931	130283710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.4	chr4	+	2433	9	ISM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	18	-2	18	2	intron_retention	FALSE	canonical	3	1067	junction_7	52.6045090747932	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130253942	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367
ES.24481.5	chr4	+	1535	11	NNC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	19	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	450.56507854027	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTCTGTTTTATTT	NA	False	NA	7	True	ATTAAA	-14	NA	130253943	130283710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130270810_130270890_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.6	chr4	+	2953	9	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	22	2	intron_retention	FALSE	canonical	3	1085	junction_7	47.6753342935317	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGACTTGGAT	NA	False	NA	24	True	ATTAAA	-25	NA	130253946	130283821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130279809_130282367_130282472_130283336
ES.24481.7	chr4	+	1629	11	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	443.970956257276	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAACCTTGTGACTTG	NA	False	NA	21	True	ATTAAA	-22	NA	130253955	130283818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130267134_130267212_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.8	chr4	+	1808	11	NNC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	457.616706425803	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	False	NA	22	True	ATTAAA	-23	NA	130253956	130283819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261291_130261548_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24481.9	chr4	+	6784	9	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	-30	7	intron_retention	FALSE	canonical	3	1067	junction_6	52.7091073724456	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGACTTGGATTTATT	NA	False	NA	29	True	ATTAAA	-30	NA	130253956	130283826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ES.24482.1	chr4	-	4130	2	Antisense	novelGene_ENSMUSG00000074088.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACCACAAACAAAACCAA	7882	False	NA	NA	False	NA	NA	NA	130267684	130262459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130264946_130266040
ES.24483.1	chr4	-	751	1	Intergenic	novelGene_20137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAACAAATAA	1546	False	NA	NA	False	NA	NA	NA	130293888	130293137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130293100_130293900
ES.24483.2	chr4	-	230	1	Intergenic	novelGene_20138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGCTTCCCTGGGGTTG	1546	False	NA	NA	False	NA	NA	NA	130293888	130293658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130293700_130293900
ES.24484.1	chr4	+	2731	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-42	-1487	-42	1471	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTGCCCTCTTGG	NA	False	NA	19	True	ATTAAA	-25	NA	130297154	130341115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.10	chr4	+	1279	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	0	-77	0	61	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCATCTCACCTCTCA	NA	False	NA	NA	False	NA	NA	NA	130297196	130339705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.100	chr4	+	4811	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_3	193.384420134139	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.101	chr4	+	5126	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.477721489857	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396373_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.102	chr4	+	6660	15	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_3	198.955435477703	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130501916_130507082
ES.24484.103	chr4	+	4999	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_13	190.137285927826	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.104	chr4	+	3794	22	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	1	-140	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	132.783492130283	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTGCCCTGCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	130390678	130507425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.106	chr4	+	5105	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	-130	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	156.141634422085	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATGTGTATAATTAACA	NA	False	NA	NA	False	AATGAA	-23	NA	130390678	130508743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.107	chr4	+	5396	23	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	198.07766758697	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.108	chr4	+	4968	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	171.601944919048	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.109	chr4	+	5120	22	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.882106115002	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390678	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.11	chr4	+	173	1	Intergenic	novelGene_20142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	157	False	NA	NA	False	NA	NA	NA	130360340	130360513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130360300_130360500
ES.24484.111	chr4	+	5303	23	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	237.934274555526	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130492834_130493048_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.112	chr4	+	4806	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-18	-771	1	-525	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGGAAAAAAAAATAG	NA	False	NA	NA	False	AATAAA	-28	NA	130390678	130508348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.113	chr4	+	5038	23	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	181.700848504093	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396336_130396553_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.114	chr4	+	4505	17	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	203.898785782922	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.116	chr4	+	5155	21	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	183.792620907369	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.117	chr4	+	5092	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_11	183.367792973575	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.118	chr4	+	4787	19	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	193.118055430696	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390679	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.119	chr4	+	5602	24	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	237.727091708802	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390679	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130473385_130473499_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.12	chr4	+	830	1	Intergenic	novelGene_20144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTTTTAGTGGA	2469	False	NA	NA	False	NA	NA	NA	130362652	130363482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130362700_130363500
ES.24484.120	chr4	+	6967	15	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-10799	intron_retention	FALSE	canonical	3	103	junction_12	155.062396920645	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGCAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	130390679	130496766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130478881_130479886_130480184_130490064_130490333_130491375_130493361_130496126
ES.24484.121	chr4	+	4375	17	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	200.90349634526	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.122	chr4	+	4969	20	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	185.219073702354	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390679	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.124	chr4	+	5278	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	182.117564381462	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390679	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.125	chr4	+	4624	18	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	227.294452563387	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390679	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499314_130499939_130500062_130501722_130501916_130507082
ES.24484.126	chr4	+	4515	18	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	195.73004147281	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTGTACTGCTCTCA	NA	False	NA	19	True	AATACA	-13	NA	130390679	130508870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.128	chr4	+	5412	23	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	198.552182078829	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390679	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130473321_130473499_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.129	chr4	+	4612	18	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	163.478197651144	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.13	chr4	+	1021	1	Intergenic	novelGene_20149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-10	NA	130381626	130382647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130381600_130382600
ES.24484.131	chr4	+	8098	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	368	junction_8	90.7959250186923	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.133	chr4	+	4868	19	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	196.700130549079	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390679	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.134	chr4	+	5274	21	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	186.965264153532	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390679	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.135	chr4	+	5065	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	187.697655745348	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390679	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.136	chr4	+	4926	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	236.610506647435	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390679	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130491690_130491839_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.137	chr4	+	4867	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	222.254589363358	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390679	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.138	chr4	+	4705	22	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	-552	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	146.36081281663	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTATACAGCCTAGT	NA	False	NA	NA	False	AATAAA	-1	NA	130390679	130508321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.14	chr4	+	5351	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-1893	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	204.152229877582	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130388738	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130389136_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.140	chr4	+	4545	18	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_4	225.628027781159	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396610_130428352_130428422_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.141	chr4	+	5047	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	205.783537402602	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.142	chr4	+	4825	19	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	216.339239775559	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.143	chr4	+	5510	23	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	191.143562722494	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130473321_130473499_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.144	chr4	+	4594	18	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	189.012842609385	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.146	chr4	+	5947	14	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-10765	intron_retention	FALSE	canonical	3	32	junction_3	177.639386058638	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACACACACACAAACA	NA	False	NA	NA	False	NA	NA	NA	130390680	130496800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231
ES.24484.147	chr4	+	4626	18	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_4	199.669276728304	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.148	chr4	+	5229	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	150.052082624667	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.149	chr4	+	4898	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	174.463752991942	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.15	chr4	+	5266	21	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	210.019493142899	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390431	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455472_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.151	chr4	+	4883	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_12	198.88811426141	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.153	chr4	+	5359	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	169.847443887188	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490041_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.154	chr4	+	5166	21	NIC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	160.16073176656	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.155	chr4	+	5128	21	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	235.572197001259	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470384_130470477_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.156	chr4	+	4928	19	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_17	201.597233226164	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130501722_130501916_130507082
ES.24484.157	chr4	+	4966	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	202.566141176769	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390680	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.158	chr4	+	6767	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-2	intron_retention	FALSE	canonical	3	17	junction_5	171.833539892824	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.16	chr4	+	5161	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	197.928295096987	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390448	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.160	chr4	+	4960	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	166.734549509092	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.161	chr4	+	5187	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	156.039546269527	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.163	chr4	+	5495	23	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	190.083110356957	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.164	chr4	+	5249	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	162.103225699901	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.166	chr4	+	4887	19	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	191.913826147744	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.167	chr4	+	5164	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	154.214225997474	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.168	chr4	+	2918	14	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-10767	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	217.109276332962	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACACACACACAAA	NA	False	NA	NA	False	NA	NA	NA	130390680	130496798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126
ES.24484.169	chr4	+	4782	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	258.047602385593	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390680	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130496536_130496678_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.17	chr4	+	5487	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-174	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	152.038081516745	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390457	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.170	chr4	+	5274	23	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.585000544425	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390680	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396373_130396610_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.171	chr4	+	4830	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	200.748419614799	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390680	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.173	chr4	+	5338	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	175.082992954109	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390681	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.174	chr4	+	4656	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	200.434042905779	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390681	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.175	chr4	+	5019	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	193.859614154161	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390681	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.177	chr4	+	4450	17	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.57979452189	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390682	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.178	chr4	+	4366	17	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	195.46319186742	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390682	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.18	chr4	+	5325	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	159.256546176288	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390458	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.180	chr4	+	5601	13	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	6	-10764	intron_retention	FALSE	canonical	3	41	junction_1	220.186221690237	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACACACACACACAAACAA	NA	False	NA	NA	False	NA	NA	NA	130390683	130496801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231
ES.24484.181	chr4	+	9551	19	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	3	junction_4	223.852850697578	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390687	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130501916_130507082
ES.24484.182	chr4	+	4036	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-9	-10	-9	10	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTAACTCATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	130390687	130507587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.183	chr4	+	5360	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	165.398974790287	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390690	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499907_130500062_130501722_130501916_130507082
ES.24484.184	chr4	+	4905	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	263.914333872317	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390696	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130434002_130434161_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.185	chr4	+	5315	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_11	154.801533387848	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390696	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.186	chr4	+	6803	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	103	junction_13	157.224912562208	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390696	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.187	chr4	+	4787	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	181.254538581059	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390697	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.188	chr4	+	3705	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	-10	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130390698	130507555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.189	chr4	+	4647	19	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-47	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	207.387065801434	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTGATCTTTATTTT	NA	False	NA	-25	True	NA	NA	NA	130390698	130508826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.19	chr4	+	3649	11	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	252.288109113371	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390458	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130501722_130501916_130507082
ES.24484.190	chr4	+	4397	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	30	187	3	-187	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCCAGAGCCTTGTG	NA	False	NA	NA	False	AATATA	-21	NA	130390699	130508686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.191	chr4	+	7765	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_13	177.818607192026	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390699	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490041_130490333_130491375_130491506_130493231_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.193	chr4	+	5183	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	202.911433881879	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390699	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130434002_130434161_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.194	chr4	+	5086	21	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	172.973870859156	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390699	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.195	chr4	+	4787	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	3	-140	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	168.416726918134	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGTAACCATATGTGT	NA	False	NA	NA	False	AATGAA	-13	NA	130390699	130508733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.196	chr4	+	4258	17	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	216.364420596363	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390699	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.198	chr4	+	4699	19	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	226.18465225028	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390699	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130468773_130468860_130470988_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.199	chr4	+	4893	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	194.891332744551	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390701	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.2	chr4	+	3098	8	NNC	ENSMUSG00000078532.10	novel	1202	7	NA	NA	-33	1471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3072668153078	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTGCCCTCTTGG	NA	False	NA	19	True	ATTAAA	-25	NA	130297163	130341115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130297542_130330901_130331278_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.20	chr4	+	5386	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	216.731471208602	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390460	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471115_130474294_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.200	chr4	+	4916	18	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	213.383518462784	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390701	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491839_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.202	chr4	+	5451	23	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	187.783856759584	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390701	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130464839_130464984_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.203	chr4	+	5505	23	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	213.095005584267	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390702	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130473321_130473499_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.205	chr4	+	7966	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	9	-2	intron_retention	FALSE	canonical	3	15	junction_8	150.057625126902	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390705	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.206	chr4	+	4587	19	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	186.663392828434	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATTTGTACTGCTCTC	NA	False	NA	18	True	AATACA	-12	NA	130390712	130508869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.207	chr4	+	5374	23	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	204.648681023426	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390714	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130482120_130482209_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.208	chr4	+	4504	18	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	208.582910253518	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390716	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.209	chr4	+	4840	19	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	155.91087395459	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390716	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.21	chr4	+	5479	22	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-171	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	146.36081281663	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGCTCTCACTTCTC	NA	False	NA	25	True	AATACA	-19	NA	130390460	130508876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.210	chr4	+	5589	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	163.745530135805	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390717	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130391073_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.212	chr4	+	5045	21	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_11	169.737267563726	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390720	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.214	chr4	+	5156	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	168.942416225174	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390734	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.215	chr4	+	4992	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	189.898369086513	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390735	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496120_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.216	chr4	+	5319	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	273	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	158.318044374617	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390989	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130391073_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.217	chr4	+	4925	21	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	5571	-2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_13	175.653522594908	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130396287	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.219	chr4	+	7083	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	5788	-1	intron_retention	FALSE	canonical	3	218	junction_6	127.03246253378	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130396504	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.22	chr4	+	5543	23	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	223.388499004768	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390461	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130434002_130434161_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.220	chr4	+	4311	17	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	5811	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_5	225.967010520894	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130396527	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.221	chr4	+	4703	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	5831	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	183.461560127241	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130396547	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.222	chr4	+	4704	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	37627	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	172.765808803009	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130428343	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.223	chr4	+	4792	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	54746	-1	combination_of_known_junctions	FALSE	canonical	3	218	junction_5	118.641018867948	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130445462	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.224	chr4	+	4465	17	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	54800	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	208.134271565257	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130445516	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.225	chr4	+	4450	17	NIC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	55765	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_9	160.382927999678	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130446481	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.226	chr4	+	4496	18	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	55869	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.020594835425	907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130446585	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130446663_130455308_130455476_130457588_130457860_130466501_130466660_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.227	chr4	+	6511	17	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	62586	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_3	121.005165179012	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130453302	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.228	chr4	+	12755	2	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	73884	-10766	intron_retention	FALSE	non_canonical	0	0	junction_1	0	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACACACACACAAAC	NA	False	NA	NA	False	NA	NA	NA	130464600	130496799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130476326_130495769
ES.24484.229	chr4	+	6958	15	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	75164	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	127.267695533983	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130465880	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.23	chr4	+	5491	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-169	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	177.811717281851	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390462	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.230	chr4	+	4438	13	ISM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	83044	9	82997	-9	3prime_fragment	FALSE	canonical	3	304	junction_8	106.437873115416	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCTGAATTTGTACTG	NA	False	NA	13	True	AATACA	-7	NA	130473713	130508864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.232	chr4	+	1137	1	Intergenic	novelGene_20154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	771	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAACATTT	NA	False	NA	NA	False	NA	NA	NA	130475370	130476507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130475400_130476500
ES.24484.233	chr4	+	3582	11	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	86226	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	256.552704136986	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130476942	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130477074_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.234	chr4	+	3842	13	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	86229	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	268.890880387483	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130476945	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130477074_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130496536_130496678_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.235	chr4	+	3467	11	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	86232	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	248.704322439317	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130476948	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130477074_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.236	chr4	+	3698	12	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	86232	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	192.153992997266	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130476948	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130477074_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.237	chr4	+	5916	8	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	89212	-2	intron_retention	FALSE	canonical	3	103	junction_1	201.356015301156	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130479928	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130480184_130490064_130490333_130491375_130491506_130493231_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.238	chr4	+	3142	9	ISM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	90581	0	90534	0	3prime_fragment	FALSE	canonical	3	304	junction_4	125.855509911168	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130481250	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.239	chr4	+	3106	1	NIC	ENSMUSG00000087449.2	novel	511	2	NA	NA	569	-142	mono-exon	FALSE	NA	NA	NA	NA	NA	802	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGTGTGCTCGCTTTG	NA	False	NA	NA	False	NA	NA	NA	130486442	130489548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130486400_130489500
ES.24484.24	chr4	+	5148	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-169	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	215.029410779084	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390462	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.240	chr4	+	3103	3	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	99177	-10766	intron_retention	FALSE	canonical	3	304	junction_2	198	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACACACACACAAAC	NA	False	NA	NA	False	NA	NA	NA	130489893	130496799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130490333_130491375_130493367_130496126
ES.24484.241	chr4	+	3361	2	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	99929	-10799	intron_retention	FALSE	canonical	3	304	junction_1	0	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGCAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	130490645	130496766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130493367_130496126
ES.24484.242	chr4	+	4721	1	FSM	ENSMUSG00000119649.1	ENSMUST00000083856.3	83	1	-1558	-3080	-1558	3080	mono-exon	FALSE	NA	NA	NA	NA	NA	843	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	130492083	130496804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130492100_130496800
ES.24484.243	chr4	+	2235	4	ISM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	108510	0	108463	0	3prime_fragment	FALSE	canonical	3	663	junction_3	16.9377946878833	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130499179	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.244	chr4	+	5552	1	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	112607	0	mono-exon	FALSE	NA	NA	NA	NA	NA	884	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130503323	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130503300_130508900
ES.24484.25	chr4	+	5554	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-253	-1310	-168	0	multi-exon	FALSE	canonical	3	304	junction_17	105.62885866236	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390463	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.26	chr4	+	5389	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	177.531102956656	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390463	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.27	chr4	+	4269	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-160	79	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	182.117564381462	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	130390471	130507656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.28	chr4	+	5122	21	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-160	-2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	205.822593511985	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390471	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.29	chr4	+	5439	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-154	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	126.002609482391	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390477	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.3	chr4	+	2731	7	FSM	ENSMUSG00000078532.10	ENSMUST00000180884.8	1028	7	-238	-1465	-31	1465	multi-exon	TRUE	canonical	3	9	junction_3	30.3790863735052	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTATCTGTCTTGCCC	NA	False	NA	13	True	ATTAAA	-19	NA	130297165	130341109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.30	chr4	+	4720	18	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	-142	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_4	215.354427425499	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390489	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.31	chr4	+	5002	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-135	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	192.248166026936	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390496	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.32	chr4	+	5233	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	187.021623081397	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390523	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.33	chr4	+	5505	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-104	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	148.559630178662	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390527	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.34	chr4	+	5316	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	173.445058184477	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390528	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.36	chr4	+	4882	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-103	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	215.860103973695	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390528	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.38	chr4	+	5028	19	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-97	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	175.260758110118	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390534	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.4	chr4	+	1502	7	FSM	ENSMUSG00000078532.10	ENSMUST00000180884.8	1028	7	-232	-242	-25	242	multi-exon	FALSE	canonical	3	9	junction_3	30.3790863735052	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTCTAGCACTCTCGT	NA	False	NA	17	True	NA	NA	NA	130297171	130339886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.43	chr4	+	5199	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	140.971131796549	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390573	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.44	chr4	+	5326	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	132.783492130283	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390596	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.45	chr4	+	4689	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	-73	-2	-35	0	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390596	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.47	chr4	+	5172	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	188.45930595224	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390599	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.49	chr4	+	4884	21	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	-32	-197	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_13	185.667013763889	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACGGTGTACATTTCCA	NA	False	NA	NA	False	AATATA	-11	NA	130390599	130508676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.5	chr4	+	1483	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	-24	-257	-24	241	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTTCTAGCACTCTCG	NA	False	NA	16	True	NA	NA	NA	130297172	130339885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
ES.24484.51	chr4	+	5069	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_13	175.703841733754	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390619	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.53	chr4	+	5225	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.949084033617	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390627	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.55	chr4	+	5369	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_11	137.291602536295	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390633	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.58	chr4	+	4640	19	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	181.643975817029	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390655	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.59	chr4	+	4363	17	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	239.172760520507	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390655	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.6	chr4	+	2702	8	NNC	ENSMUSG00000078532.10	novel	1202	7	NA	NA	-11	115017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.0009874760433	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATTGGACAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	130297185	130454661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331_130341099_130454642
ES.24484.60	chr4	+	5068	20	FSM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	-10	0	-10	0	multi-exon	FALSE	canonical	3	63	junction_3	153.52394310997	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390659	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.61	chr4	+	4527	18	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	190.715135675642	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390666	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.63	chr4	+	5342	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-27	-1298	0	0	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390669	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.64	chr4	+	7642	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	218	junction_8	119.615751378484	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390670	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130501916_130507082
ES.24484.65	chr4	+	4309	17	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	238.587379171657	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390671	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.69	chr4	+	4961	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	173.705517034432	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390671	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.7	chr4	+	2692	7	NNC	ENSMUSG00000078532.10	novel	1202	7	NA	NA	-9	1471	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	31.3975405972435	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTGCCCTCTTGG	NA	False	NA	19	True	ATTAAA	-25	NA	130297187	130341115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339171_130339331
ES.24484.71	chr4	+	4970	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	198.494067258551	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390671	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.72	chr4	+	7392	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	-1	intron_retention	FALSE	canonical	2	18	junction_14	198.0664988082	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACTGCTCTCACT	NA	False	NA	21	True	AATACA	-15	NA	130390671	130508872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130501916_130507082
ES.24484.73	chr4	+	4942	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	191.369130332772	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390671	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.75	chr4	+	4983	20	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	189.845614489037	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390673	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.76	chr4	+	4927	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	201.412436381386	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390675	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.77	chr4	+	4649	19	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	232.38200244797	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390676	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390706_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.79	chr4	+	4799	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	209.463779189252	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390676	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130428352_130428422_130445464_130445574_130446483_130446663_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.8	chr4	+	2639	8	NNC	ENSMUSG00000078532.10	novel	1202	7	NA	NA	-8	1462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.0009874760433	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTGTATCTGTCTTG	NA	False	NA	10	True	ATTAAA	-16	NA	130297188	130341106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331_130340543_130340591
ES.24484.80	chr4	+	5047	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390676	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.81	chr4	+	5350	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	142.356790432747	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390676	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.84	chr4	+	5174	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_14	162.212522618727	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490227_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.85	chr4	+	5215	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	160.282999722366	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130501722_130501916_130507082
ES.24484.86	chr4	+	4784	19	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	177.648077687806	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.87	chr4	+	5449	23	NNC	ENSMUSG00000028580.16	novel	3991	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	191.551414024737	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130484940_130485053_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.89	chr4	+	4745	19	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	1	-196	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	191.035934826571	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGGTGTACATTTCCAG	NA	False	NA	NA	False	AATATA	-12	NA	130390678	130508677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.9	chr4	+	2701	7	NNC	ENSMUSG00000078532.10	novel	1028	7	NA	NA	-1	1471	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	38.655530005421	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTTGCCCTCTTGG	NA	False	NA	19	True	ATTAAA	-25	NA	130297195	130341115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130297542_130332055_130332194_130333903_130333985_130337183_130337399_130338581_130338643_130339094_130339171_130339331
ES.24484.90	chr4	+	5060	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	183.889987492522	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390678	130508873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.91	chr4	+	4810	19	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	63	junction_3	188.126303777115	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.93	chr4	+	2268	4	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	302.915096282037	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396515_130501815_130501916_130507082
ES.24484.94	chr4	+	5191	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	184.35316650386	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.95	chr4	+	5329	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	155.139714663137	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468859_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.96	chr4	+	5056	20	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	182.647944056713	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTACTGCTCTCAC	NA	False	NA	20	True	AATACA	-14	NA	130390678	130508871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.97	chr4	+	3688	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	1	91	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	156.67976409369	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAAATTTGAATTTTA	NA	False	NA	NA	False	ATTAAA	-10	NA	130390678	130507668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24484.99	chr4	+	5285	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	191.318654344003	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390678	130508875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130390779_130396235_130396610_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ES.24485.1	chr4	-	216	1	Intergenic	novelGene_20139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCTCAGTAGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	130312685	130312469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130312500_130312700
ES.24486.1	chr4	-	175	2	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGGGCAA	NA	False	NA	NA	False	NA	NA	NA	130427154	130317660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130317787_130427105
ES.24486.10	chr4	-	352	2	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTGAGAGTTAACAAT	NA	False	NA	NA	False	NA	NA	NA	130398244	130369316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130369597_130398172
ES.24486.11	chr4	-	169	1	Intergenic	novelGene_20147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATCAGTCTGGCC	NA	False	NA	NA	False	NA	NA	NA	130373810	130373641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130373600_130373800
ES.24486.12	chr4	-	90	1	Intergenic	novelGene_20148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTATGTC	NA	False	NA	-13	True	NA	NA	NA	130375867	130375777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130375800_130375900
ES.24486.13	chr4	-	1595	2	Intergenic	novelGene_20150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGGTGTCCAATTTGTA	NA	False	NA	NA	False	NA	NA	NA	130387562	130385088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130386516_130387394
ES.24486.14	chr4	-	5119	22	Antisense	novelGene_ENSMUSG00000119144.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCCCGCTGGGGCGAGC	NA	False	NA	NA	False	NA	NA	NA	130508545	130390492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130390704_130396233_130396607_130428349_130428420_130445462_130445572_130446481_130446663_130455308_130455471_130457583_130457857_130468770_130468867_130471002_130471102_130474284_130474438_130476719_130476858_130478732_130478879_130479884_130480182_130481250_130481488_130490062_130490329_130491369_130491506_130493231_130493359_130496124_130496262_130499179_130499312_130499941_130500060_130501720_130501914_130507080
ES.24486.15	chr4	-	172	2	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTAGT	NA	False	NA	NA	False	NA	NA	NA	130410800	130394088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130394098_130410637
ES.24486.16	chr4	-	6395	2	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTACTCCTAGGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	130423409	130410577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130411739_130418175
ES.24486.17	chr4	-	2174	1	Intergenic	novelGene_20151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTATAGCTTGATCA	NA	False	NA	NA	False	NA	NA	NA	130416317	130414143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130414100_130416300
ES.24486.18	chr4	-	224	1	Intergenic	novelGene_20152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCAATTGTCAATATAG	NA	False	NA	NA	False	NA	NA	NA	130427155	130426931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130426900_130427200
ES.24486.19	chr4	-	5929	1	Intergenic	novelGene_20153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCTCCCCAACAGCATA	NA	False	NA	NA	False	NA	NA	NA	130453083	130447154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130447200_130453100
ES.24486.2	chr4	-	1967	1	Antisense	novelGene_ENSMUSG00000078532.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATTCTGTCTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	130337420	130335453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130335500_130337400
ES.24486.20	chr4	-	6339	16	Antisense	novelGene_ENSMUSG00000119144.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAGGGAGGGAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	130508214	130454926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130457857_130468770_130468867_130471002_130471102_130474284_130474438_130476719_130476858_130478732_130478879_130479884_130480182_130481250_130481488_130490062_130490329_130491369_130491506_130493231_130493359_130496124_130496262_130499179_130499312_130499941_130500060_130501720_130501914_130507080
ES.24486.21	chr4	-	4091	9	Antisense	novelGene_ENSMUSG00000119649.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130494258	130454952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130455471_130457583_130457857_130468770_130468867_130474287_130474438_130476719_130476858_130478732_130478879_130479884_130480185_130490062_130491506_130493231
ES.24486.22	chr4	-	6319	16	Antisense	novelGene_ENSMUSG00000119144.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130508214	130454953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130457857_130468770_130468867_130470999_130471107_130474290_130474438_130476719_130476861_130478736_130478879_130479884_130480182_130481250_130481488_130490062_130490329_130491369_130491506_130493231_130493367_130496126_130496262_130499179_130499312_130499941_130500060_130501720_130501914_130507080
ES.24486.23	chr4	-	2020	13	Antisense	novelGene_ENSMUSG00000119649.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTTATGCAACTTATG	NA	False	NA	NA	False	NA	NA	NA	130499200	130464816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130464984_130468773_130468867_130470999_130471102_130474284_130474438_130476719_130476858_130478732_130478879_130479884_130480182_130481250_130481488_130490062_130490329_130491369_130491506_130493231_130493359_130496124_130496262_130499179
ES.24486.24	chr4	-	6465	8	Antisense	novelGene_ENSMUSG00000065196.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130492702	130464836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130468867_130470999_130471102_130474284_130474438_130476719_130476858_130478732_130478879_130479884_130480182_130490062_130490329_130491369
ES.24486.25	chr4	-	8395	2	Antisense	novelGene_ENSMUSG00000119649.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130495090	130482972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130485758_130489480
ES.24486.26	chr4	-	1887	4	Antisense	novelGene_ENSMUSG00000119144.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAAAGTGTCAAGCAATTG	NA	False	NA	NA	False	NA	NA	NA	130508214	130498869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130499312_130499941_130500060_130501720_130501914_130507080
ES.24486.27	chr4	-	2280	1	Antisense	novelGene_ENSMUSG00000028580.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	130508214	130505934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130505900_130508200
ES.24486.3	chr4	-	1874	1	Antisense	novelGene_ENSMUSG00000078532.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAACTTTTGGGAGTT	NA	False	NA	NA	False	NA	NA	NA	130338201	130336327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130336300_130338200
ES.24486.4	chr4	-	1308	6	Antisense	novelGene_ENSMUSG00000078532.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	1.6	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGTGTGTGTGTGTGT	8601	False	NA	NA	False	NA	NA	NA	130351339	130336477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130337093_130338468_130338624_130339078_130339185_130339312_130339487_130340389_130340439_130351130
ES.24486.5	chr4	-	174	1	Intergenic	novelGene_20140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTTATTTAAA	4932	False	NA	NA	False	NA	NA	NA	130355008	130354834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130354800_130355000
ES.24486.6	chr4	-	387	2	Intergenic	novelGene_20141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCAGGGTTGGCAACA	NA	False	NA	NA	False	NA	NA	NA	130362533	130359839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130360111_130362417
ES.24486.7	chr4	-	150	1	Intergenic	novelGene_20143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	130360671	130360521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130360500_130360700
ES.24486.8	chr4	-	252	1	Intergenic	novelGene_20145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTTTTCATCCCGAG	NA	False	NA	NA	False	NA	NA	NA	130364766	130364514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130364500_130364800
ES.24486.9	chr4	-	361	1	Intergenic	novelGene_20146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTGAGAGTTAACAAT	NA	False	NA	NA	False	NA	NA	NA	130369677	130369316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_130369300_130369700
ES.24487.1	chr4	+	1910	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	-34	3097	-34	972	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACCCAGATGCTGTG	NA	False	NA	NA	False	AATACA	-24	NA	130519813	130550533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
ES.24487.2	chr4	+	5020	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	-30	-17	-30	17	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATATGAGTAGGGGACTG	NA	False	NA	27	True	AATAAA	-35	NA	130519817	130553647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
ES.24487.3	chr4	+	5096	6	NNC	ENSMUSG00000025743.15	novel	4973	5	NA	NA	-27	-2	intron_retention	FALSE	canonical	0	0	junction_1	33.4867137832305	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGTGGTGGCCCACGTG	NA	False	NA	8	True	AATAAA	-16	NA	130519820	130553628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130520114_130543624_130543723_130544155_130544274_130545892_130546516_130548678_130548968_130549953
ES.24487.5	chr4	+	1821	4	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	70	4068	70	1	5prime_fragment	FALSE	canonical	3	62	junction_1	7.58653778449403	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTATGTTTAGT	NA	False	NA	NA	False	NA	NA	NA	130519917	130549562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678
ES.24488.1	chr4	+	122	1	Intergenic	novelGene_20155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAATAAACACACAA	NA	False	NA	NA	False	NA	NA	NA	130580976	130581098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130581000_130581100
ES.24489.1	chr4	+	1228	5	Intergenic	novelGene_20156	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGCCTTAAGCAACGT	NA	False	NA	NA	False	AATAAA	-42	NA	130585210	130600727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130585416_130588127_130588201_130598489_130598588_130599382_130599498_130599990
ES.24489.2	chr4	+	1849	4	Intergenic	novelGene_20157	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTATTTTTATTATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	130587878	130598342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130587900_130588095_130588201_130594661_130594839_130596796
ES.2449.1	chr10	-	1015	1	Antisense	novelGene_ENSMUSG00000019970.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGATTGCATTGCAC	NA	False	NA	NA	False	NA	NA	NA	21870436	21869421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_21869400_21870400
ES.24490.1	chr4	-	6102	1	FSM	ENSMUSG00000077381.3	ENSMUST00000104193.3	130	1	-1750	-4222	-1750	4222	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGATAGCTAATATTTA	NA	False	NA	NA	False	NA	NA	NA	130586941	130580839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_130580800_130586900
ES.24491.1	chr4	+	2600	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-7010	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCATGTGGTTCTT	NA	False	NA	21	True	AATAAA	-17	NA	130633425	130663451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130633504_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.10	chr4	+	2749	8	FSM	ENSMUSG00000028581.18	ENSMUST00000151698.8	2600	8	-151	2	-151	-2	multi-exon	FALSE	canonical	3	425	junction_4	26.2071808199702	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640284	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.11	chr4	+	2577	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-16	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640419	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662505_130662541
ES.24491.12	chr4	+	2544	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640438	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662469_130662519
ES.24491.14	chr4	+	2381	7	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-84	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.729992064795	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTCTCATGTGGTTC	NA	False	NA	19	True	AATAAA	-15	NA	130640534	130663449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654168_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.15	chr4	+	2456	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-78	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640540	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662721_130662757
ES.24491.16	chr4	+	2497	8	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	167.235505457765	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640558	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661749
ES.24491.17	chr4	+	2432	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-54	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640564	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662757_130662793
ES.24491.18	chr4	+	2411	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-33	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640585	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662469_130662505
ES.24491.19	chr4	+	2387	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640608	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662446_130662483
ES.24491.2	chr4	+	2825	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-2977	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130637458	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130637763_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.20	chr4	+	2353	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTGTCTCATGTGGTT	NA	False	NA	18	True	AATAAA	-14	NA	130640626	130663448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662422_130662473
ES.24491.21	chr4	+	2363	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTCTCATGTGGTTC	NA	False	NA	19	True	AATAAA	-15	NA	130640626	130663449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662477_130662519
ES.24491.22	chr4	+	2360	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640626	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662589_130662635
ES.24491.23	chr4	+	2326	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640626	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662565_130662645
ES.24491.24	chr4	+	2337	8	NNC	ENSMUSG00000028581.18	novel	397	2	NA	NA	958	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	165.980574226047	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130641626	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130641676_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.25	chr4	+	2425	1	NIC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	1683	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130661025	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_130661000_130663400
ES.24491.26	chr4	+	2351	2	NNC	ENSMUSG00000028581.18	novel	397	2	NA	NA	1719	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130661061	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130662734_130662771
ES.24491.27	chr4	+	1231	2	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	2841	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130662183	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130662639_130662674
ES.24491.3	chr4	+	2610	10	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-2253	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	199.060261364043	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCATGTGGTTCTT	NA	False	NA	21	True	AATAAA	-17	NA	130638182	130663451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130638308_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
ES.24491.4	chr4	+	2560	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-398	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTGTCTCATGTGGTT	NA	False	NA	18	True	AATAAA	-14	NA	130640037	130663448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640079_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.5	chr4	+	2576	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-273	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	154.279778324964	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640162	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640218_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.6	chr4	+	2556	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-241	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	206.916310074871	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640194	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640218_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656086_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.7	chr4	+	1165	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-241	-318	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	154.279778324964	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCGTCTCCATCAGCAG	NA	False	NA	NA	False	NA	NA	NA	130640194	130662071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640218_130640512_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ES.24491.8	chr4	+	2779	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-218	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640217	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662433_130662469
ES.24491.9	chr4	+	2760	9	NNC	ENSMUSG00000028581.18	novel	2600	8	NA	NA	-199	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	159.179487921654	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTCATGTGGTTCT	NA	False	NA	20	True	AATAAA	-16	NA	130640236	130663450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130640746_130653415_130653510_130654081_130654159_130655947_130656074_130656730_130656854_130658081_130658178_130659327_130659421_130661771_130662649_130662685
ES.24492.1	chr4	+	2053	8	NNC	ENSMUSG00000040533.8	novel	2001	8	NA	NA	-68	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.36808406515884	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTGTACACCCTGGATG	1423	False	NA	NA	False	AATAAA	-16	NA	130671627	130682770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681727_130682276
ES.24493.1	chr4	-	287	2	Antisense	novelGene_ENSMUSG00000085804.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCACGTTCCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	130703007	130697046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130697195_130702868
ES.24494.1	chr4	+	4452	2	Intergenic	novelGene_20158	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTATCCAGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	130776224	130781867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130776844_130778034
ES.24495.1	chr4	+	194	1	Intergenic	novelGene_20159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTATAATATGCAACATA	8114	False	NA	NA	False	AATGAA	-30	NA	130803475	130803669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130803500_130803700
ES.24496.1	chr4	+	296	1	Intergenic	novelGene_20160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTTTTGAAATCATC	NA	False	NA	NA	False	NA	NA	NA	130865812	130866108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130865800_130866100
ES.24497.1	chr4	+	3853	3	Intergenic	novelGene_20161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATAATCTGCTGATAT	NA	False	NA	NA	False	AATAAA	-11	NA	130882840	130887192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130886032_130886317_130886398_130886610
ES.24498.1	chr4	+	178	1	Intergenic	novelGene_20162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	790	False	NA	NA	False	NA	NA	NA	130906042	130906220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_130906000_130906200
ES.24499.1	chr4	-	2110	2	Antisense	novelGene_ENSMUSG00000088041.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCAAACTCTAAGCCTC	NA	False	NA	NA	False	TTTAAA	-30	NA	130968340	130966075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_130968126_130968280
ES.245.1	chr1	-	121	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGTGTTGCGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	34639259	34639138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34639100_34639300
ES.2450.1	chr10	-	5249	1	Antisense	novelGene_ENSMUSG00000019970.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGAAAATAACCCAGTT	NA	False	NA	NA	False	AAAACA	-38	NA	21876476	21871227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_21871200_21876500
ES.24500.1	chr4	-	3930	5	Intergenic	novelGene_20163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCCGTGTATGACTCT	NA	False	NA	NA	False	TATAAA	-25	NA	131093437	131080232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131081748_131081792_131083941_131084333_131084398_131092209_131092337_131093361
ES.24501.1	chr4	+	1732	3	Intergenic	novelGene_20164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCGTGATTCTTCGTG	NA	False	NA	NA	False	NA	NA	NA	131171051	131175672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131171168_131173918_131174039_131174176
ES.24502.1	chr4	-	5774	5	Intergenic	novelGene_20165	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGATCTGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	131477280	131467823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131472722_131473357_131473812_131474978_131475030_131476481_131476683_131477110
ES.24503.1	chr4	-	5495	30	FSM	ENSMUSG00000028909.18	ENSMUST00000105987.9	5484	30	-11	0	-11	0	multi-exon	FALSE	canonical	1	1	junction_25	2.06954015008602	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGGCTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	131565610	131495767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507385_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142_131551275_131565394
ES.24503.2	chr4	-	5688	29	NIC	ENSMUSG00000028909.18	novel	5484	30	NA	NA	-12	0	intron_retention	FALSE	canonical	1	1	junction_24	2.10199128136602	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGGCTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	131565611	131495767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507385_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142_131551275_131565394
ES.24503.3	chr4	-	3828	22	NNC	ENSMUSG00000028909.18	novel	5484	30	NA	NA	311	0	intron_retention	TRUE	canonical	0	0	junction_10	2.46149485396573	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGGCTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	131530620	131495767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530572
ES.24503.4	chr4	-	4930	27	NNC	ENSMUSG00000028909.18	novel	5484	30	NA	NA	707	0	intron_retention	FALSE	canonical	0	0	junction_10	2.45823095096535	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	131548120	131495768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018
ES.24503.5	chr4	-	4765	25	NNC	ENSMUSG00000028909.18	novel	5484	30	NA	NA	1713	-2	intron_retention	FALSE	canonical	0	0	junction_10	2.21382963813087	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGTGGCTCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	131547114	131495770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839
ES.24503.6	chr4	-	3612	17	NNC	ENSMUSG00000028909.18	novel	4292	26	NA	NA	-13	1323	intron_retention	FALSE	canonical	0	0	junction_9	2.65753645318366	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCGTTTGGTACCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	131565612	131514519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142_131551275_131557530_131557668_131565394
ES.24504.1	chr4	+	1343	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	-1	-5	-1	5	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTGTGGAGGAATGCTG	NA	False	NA	38	True	AATAAA	-38	NA	131570779	131595102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.10	chr4	+	1472	10	NNC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	-194	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.7884605508704	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCATGCGTGTGGAGGA	7880	False	NA	32	True	AATAAA	-32	NA	131580802	131595096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131581125_131581895_131582028_131585067_131585212_131588071_131588240_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.2	chr4	+	1394	11	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	55.4697214703662	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGCGTGTGGAGGAAT	NA	False	NA	34	True	AATAAA	-34	NA	131570780	131595098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.3	chr4	+	7607	5	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	2	0	2	0	intron_retention	FALSE	canonical	3	123	junction_4	11.0113577727726	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	33	True	AATAAA	-33	NA	131570782	131595097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071
ES.24504.4	chr4	+	4226	10	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	9	-8	intron_retention	FALSE	canonical	1	1	junction_4	58.3205276949488	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGGATGAAGAGTACA	NA	False	NA	15	True	AATAAA	-15	NA	131570789	131595079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.5	chr4	+	5081	8	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	9	-9	intron_retention	FALSE	canonical	3	105	junction_4	17.2662227768436	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAGGATGAAGAGTAC	NA	False	NA	14	True	AATAAA	-14	NA	131570789	131595078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.6	chr4	+	1453	12	NNC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.546323889006	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGGATGAAGAGTACA	NA	False	NA	15	True	AATAAA	-15	NA	131570819	131595079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131570990_131576127_131576245_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.7	chr4	+	7495	10	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	3898	-2	intron_retention	FALSE	canonical	1	1	junction_4	57.5817186352375	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCATGCGTGTGGAGG	1791	False	NA	31	True	AATAAA	-31	NA	131574713	131595095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131588487_131588544_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ES.24504.8	chr4	+	4769	1	NIC	ENSMUSG00000028910.13	novel	765	6	NA	NA	-5018	-4735	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCACCACATGATTTTT	3056	False	NA	NA	False	NA	NA	NA	131575978	131580747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131576000_131580700
ES.24504.9	chr4	+	2294	1	NIC	ENSMUSG00000028910.13	novel	765	6	NA	NA	-3020	-5212	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACTAAGACGCCACCT	5054	False	NA	NA	False	AAAAAG	-4	NA	131577976	131580270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131578000_131580300
ES.24505.1	chr4	+	2405	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-129	-19	-129	19	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCATTTCCTGGTGTG	NA	False	NA	41	True	AATAAA	-41	NA	131600798	131629036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.10	chr4	+	5633	9	NNC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.09106447559	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCACCGCGCTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	131600927	131629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131616431_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.11	chr4	+	4262	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	0	1457	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	176.699603847886	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCGTTCTTTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	131600927	131630474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601165_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.12	chr4	+	2218	6	NNC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	160.128698239885	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCACCGCGCTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	131600945	131629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601165_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.13	chr4	+	2584	8	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	176.6374125439	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600958	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.14	chr4	+	2628	10	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	178.567827829658	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600962	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601182_131611586_131611794_131612666_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575_131628156_131628267
ES.24505.15	chr4	+	2886	10	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	182.709916480324	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131600967	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131616320_131616431_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.16	chr4	+	3600	8	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	40	-8	intron_retention	FALSE	canonical	3	56	junction_2	164.118299791737	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAATTTCACCGCGCT	NA	False	NA	14	True	AATAAA	-14	NA	131600967	131629009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131611586_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.17	chr4	+	3513	8	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	40	0	intron_retention	FALSE	canonical	3	56	junction_3	166.248032058323	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600967	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.18	chr4	+	2384	7	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	41	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	170.546181428961	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131600968	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.19	chr4	+	3616	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	41	-1400	41	1400	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATTCTTGGTAAGTCA	NA	False	NA	NA	False	CATAAA	-16	NA	131600968	131630417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.2	chr4	+	2907	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600842	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.21	chr4	+	7714	6	Fusion	ENSMUSG00000028911.17_ENSMUSG00000102602.2	novel	3100	6	NA	NA	1148	-6	intron_retention	FALSE	canonical	3	56	junction_1	140.111955235804	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131607086	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_131612804_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.22	chr4	+	8164	6	FSM	ENSMUSG00000028911.17_ENSMUSG00000102602.2	ENSMUST00000030743.10	3100	6	-5070	6	1510	-6	multi-exon	FALSE	canonical	3	90	junction_1	126.835326309353	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131607448	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.23	chr4	+	6015	7	Fusion	ENSMUSG00000028911.17_ENSMUSG00000102602.2	novel	3100	6	NA	NA	-2644	-4	intron_retention	FALSE	canonical	3	56	junction_1	156.117921955026	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCACCGCGCTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	131608961	131629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.24	chr4	+	2585	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	192.538794792115	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCACCGCGCTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	131611623	131629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131611794_131612666_131612804_131613441_131613616_131616325_131616431_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.26	chr4	+	7402	4	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	1323	-8	intron_retention	FALSE	canonical	3	361	junction_3	37.2588542795162	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAATTTCACCGCGCT	NA	False	NA	14	True	AATAAA	-14	NA	131613841	131629009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.27	chr4	+	3899	5	ISM	ENSMUSG00000028911.17	ENSMUST00000030743.10	3100	6	4107	-4	4107	4	3prime_fragment	FALSE	canonical	3	361	junction_4	32.3061526647789	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCGCTTGAATCTAAATG	NA	False	NA	26	True	AATAAA	-26	NA	131616625	131629021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.28	chr4	+	5855	10	NNC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	6947	16261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.396768194363	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTCACGAGCAGGCATA	NA	False	NA	NA	False	NA	NA	NA	131619465	131645278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131619505_131624967_131625183_131627372_131627463_131627575_131630430_131631451_131631679_131638538_131638644_131639376_131639573_131639692_131639741_131642808_131642942_131643330
ES.24505.29	chr4	+	2139	3	ISM	ENSMUSG00000028911.17	ENSMUST00000030743.10	3100	6	12051	6	12051	-6	3prime_fragment	FALSE	canonical	3	361	junction_2	13.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131624569	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_131625183_131627372_131627463_131627575
ES.24505.3	chr4	+	2878	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	176.699603847886	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600854	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601165_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.30	chr4	+	174	1	Intergenic	novelGene_20167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	131634169	131634343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131634200_131634300
ES.24505.4	chr4	+	2919	9	NIC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.465051719709	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600854	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613417_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.5	chr4	+	2843	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	173.501035659733	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600859	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601182_131611586_131611794_131612666_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.6	chr4	+	2707	8	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	-63	-4	combination_of_known_splicesites	FALSE	canonical	3	56	junction_3	169.115707280488	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCACCGCGCTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	131600864	131629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.7	chr4	+	5095	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	-21	-2817	-21	2817	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTAACAATTGAGATTC	NA	False	NA	NA	False	CATAAA	-22	NA	131600906	131631834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.8	chr4	+	3009	5	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	354	junction_1	37.8442531964894	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600906	131629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_131601182_131618517_131619505_131624967_131625183_131627372_131627463_131627575
ES.24505.9	chr4	+	2831	9	NNC	ENSMUSG00000028911.17	novel	3100	6	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	170.333817473219	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	False	NA	16	True	AATAAA	-16	NA	131600920	131629011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618669_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ES.24506.1	chr4	+	2461	3	NNC	ENSMUSG00000070720.5	novel	961	2	NA	NA	-1309	815	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTGTGCCTGAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	131647201	131651266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_131647372_131648510_131648597_131649061
ES.24506.2	chr4	+	3890	1	FSM	ENSMUSG00000070720.5	ENSMUST00000094666.4	1370	1	-1705	-815	-1134	815	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTGTGCCTGAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	131647376	131651266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131647400_131651300
ES.24506.3	chr4	+	3268	2	FSM	ENSMUSG00000070720.5	ENSMUST00000238733.2	961	2	-977	-1330	-977	815	multi-exon	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTGTGCCTGAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	131647533	131651266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_131648597_131649061
ES.24507.1	chr4	+	171	1	Intergenic	novelGene_20169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	131667870	131668041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131667900_131668000
ES.24508.1	chr4	+	1160	1	Intergenic	novelGene_20170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131688124	131689284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131688100_131689300
ES.24509.1	chr4	-	229	1	Intergenic	novelGene_20166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAGCTCCCCAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	131625651	131625422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131625400_131625700
ES.2451.1	chr10	-	180	1	Intergenic	novelGene_1864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATCTTGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	21885347	21885167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21885200_21885300
ES.24510.1	chr4	-	5389	21	NNC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-68	19978	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	50.2745213801186	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCCCCCAAAACAAAACAT	NA	False	NA	NA	False	NA	NA	NA	131776470	131630745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131630777_131650723_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.10	chr4	-	7225	7	ISM	ENSMUSG00000028906.18	ENSMUST00000146443.8	3278	9	812	0	812	0	intron_retention	FALSE	canonical	3	43	junction_6	41.3709506242672	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131694344	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234
ES.24510.11	chr4	-	5755	20	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	38.5763982786771	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776474	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.12	chr4	-	5220	19	NNC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.04151699284	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5282	False	NA	NA	False	AATAAA	-21	NA	131802659	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131728618_131728741_131730895_131731106_131734268_131734733_131802490
ES.24510.13	chr4	-	5306	19	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	34.6963903911176	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776475	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.14	chr4	-	5230	18	FSM	ENSMUSG00000028906.18	ENSMUST00000084253.10	5141	18	-73	-16	-60	0	multi-exon	FALSE	canonical	3	49	junction_17	28.8854077694417	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776462	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.18	chr4	-	5807	21	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	47.7414652058355	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776469	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.19	chr4	-	5160	20	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	44.2651291882206	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5343	False	NA	NA	False	AATAAA	-21	NA	131802598	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.2	chr4	-	5562	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-37	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	31.5264439267525	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGTGAGGATTGATC	5272	False	NA	NA	False	AATAAA	-22	NA	131802669	131650722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.22	chr4	-	5420	20	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	52.4978300567254	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131734668	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663164_131664325_131664776_131684953_131685131_131690234_131690298_131691441_131691499_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ES.24510.23	chr4	-	5158	18	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	-17590	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	36.9099718336555	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131752339	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131752130
ES.24510.24	chr4	-	3720	20	NNC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.9889181324927	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5343	False	NA	NA	False	AATAAA	-21	NA	131802598	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131651425_131653194_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.25	chr4	-	4973	17	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	35.789095755551	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5308	False	NA	NA	False	AATAAA	-21	NA	131802633	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.28	chr4	-	5687	19	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	34.7035060668707	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776469	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.29	chr4	-	5164	20	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.0399080167837	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5318	False	NA	NA	False	AATAAA	-21	NA	131802623	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131682853_131682890_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.3	chr4	-	5154	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	31.5274229054918	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGTGAGGATTGATC	5293	False	NA	NA	False	AATAAA	-22	NA	131802648	131650722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.31	chr4	-	5594	21	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	48.3548084475577	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5373	False	NA	NA	False	AATAAA	-21	NA	131802568	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131797938_131797993_131802490
ES.24510.32	chr4	-	5259	20	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	47.6785752450314	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776392	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131682853_131682890_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.33	chr4	-	3834	9	NNC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	50.8447391575569	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776448	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695225_131734423_131734750_131776181
ES.24510.34	chr4	-	4819	16	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	46.661714022907	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGACTGTGAGGATT	NA	False	NA	NA	False	AATAAA	-18	NA	131776380	131650726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131776181
ES.24510.36	chr4	-	4254	11	NNC	ENSMUSG00000028906.18	novel	4844	16	NA	NA	-11088	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.8339837354156	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCTGACTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	131706275	131650729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131662968_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120
ES.24510.38	chr4	-	5346	18	NNC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.9330755017835	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131734670	131650739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684911_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ES.24510.4	chr4	-	5125	19	NNC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	40.6509152858856	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5302	False	NA	NA	False	AATAAA	-21	NA	131802639	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717226_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.40	chr4	-	5546	7	ISM	ENSMUSG00000028906.18	ENSMUST00000135579.8	3654	8	8060	16	8029	0	3prime_fragment	FALSE	canonical	3	36	junction_5	45.3887528897731	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131687127	131650739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953
ES.24510.41	chr4	-	5019	18	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	41.2636891409686	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5329	False	NA	NA	False	AATAAA	-4	NA	131802612	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663164_131684953_131685131_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.42	chr4	-	5122	20	NNC	ENSMUSG00000028906.18	novel	6565	21	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	46.7308554724349	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5392	False	NA	NA	False	AATAAA	-4	NA	131802549	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131797938_131798007_131802490
ES.24510.43	chr4	-	5570	21	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	47.757303106436	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5392	False	NA	NA	False	AATAAA	-4	NA	131802549	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131732929_131733013_131734268_131734733_131802490
ES.24510.44	chr4	-	5206	20	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	46.2545049090003	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5306	False	NA	NA	False	AATAAA	-4	NA	131802635	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131732929_131733013_131734268_131734733_131802490
ES.24510.45	chr4	-	5251	18	NIC	ENSMUSG00000028906.18	novel	5059	19	NA	NA	85	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	43.2147610306277	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATAAA	-4	NA	131734657	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ES.24510.46	chr4	-	5619	21	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	46.321809118384	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5317	False	NA	NA	False	AATAAA	-4	NA	131802624	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.47	chr4	-	5335	21	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.8902588600203	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	5296	False	NA	NA	False	AATAAA	-4	NA	131802645	131650740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695284_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131728618_131728741_131730895_131731106_131732929_131733013_131734268_131734733_131802490
ES.24510.48	chr4	-	4450	15	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	179	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	44.3860614267541	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-3	NA	131734563	131650741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131734268
ES.24510.50	chr4	-	5205	20	NNC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	46.1742454386453	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTTAAAAAAAAAAAAAAA	5342	False	NA	NA	False	NA	NA	NA	131802599	131650744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131728618_131728741_131730895_131731106_131734268_131734733_131802490
ES.24510.51	chr4	-	3975	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	31	1068	2	-352	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTGCATTTTCTTT	5340	False	NA	NA	False	NA	NA	NA	131802601	131651791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.52	chr4	-	3116	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	33	1925	4	1172	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTGATACTGTGAACAT	5342	False	NA	NA	False	AAGAAA	-16	NA	131802599	131652648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.53	chr4	-	176	1	Intergenic	novelGene_20168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	131660877	131660701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131660700_131660900
ES.24510.54	chr4	-	3544	1	Genic_Genomic	ENSMUSG00000028906.18	novel	NA	NA	NA	NA	-10818	2435	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131675516	131671972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_131672000_131675500
ES.24510.55	chr4	-	187	1	ISM	ENSMUSG00000028906.18	ENSMUST00000212761.2	8302	10	42474	1529	-11425	-1529	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAATAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	131676123	131675936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131675900_131676100
ES.24510.56	chr4	-	3772	7	ISM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	-1	63790	-1	2348	5prime_fragment	FALSE	canonical	3	94	junction_6	13.8373488147919	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGTAGTCTTTAATA	5308	False	NA	NA	False	NA	NA	NA	131802633	131714513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.57	chr4	-	3845	7	ISM	ENSMUSG00000028906.18	ENSMUST00000238852.2	2375	15	-7	29612	-7	2319	5prime_fragment	FALSE	canonical	3	49	junction_6	30.3351647798759	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	131776409	131714542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.58	chr4	-	2846	7	ISM	ENSMUSG00000028906.18	ENSMUST00000238852.2	2375	15	-49	30653	-49	1278	5prime_fragment	FALSE	canonical	3	49	junction_6	30.3351647798759	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAACATTTGGATGGA	NA	False	NA	NA	False	NA	NA	NA	131776451	131715583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.59	chr4	-	2647	7	NNC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	1	1273	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	47.5899732670187	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTGTCAACATTTGG	5339	False	NA	NA	False	NA	NA	NA	131802602	131715588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131717226_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.6	chr4	-	5613	20	NIC	ENSMUSG00000028906.18	novel	5235	21	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	36.2164162896367	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5283	False	NA	NA	False	AATAAA	-21	NA	131802658	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.60	chr4	-	1382	7	ISM	ENSMUSG00000028906.18	ENSMUST00000238852.2	2375	15	-18	32086	-18	-155	5prime_fragment	FALSE	canonical	3	49	junction_6	30.3351647798759	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGATATTCTGTATTT	NA	False	NA	NA	False	CATAAA	-18	NA	131776420	131717016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24510.61	chr4	-	159	1	Intergenic	novelGene_20171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAACCAAACATAA	NA	False	NA	NA	False	NA	NA	NA	131745326	131745167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131745200_131745300
ES.24510.62	chr4	-	171	1	Intergenic	novelGene_20172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	131760798	131760627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131760600_131760800
ES.24510.63	chr4	-	6946	2	Intergenic	novelGene_20173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131796225	131789157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131791144_131791265
ES.24510.7	chr4	-	5101	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	-27	0	-27	0	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5282	False	NA	NA	False	AATAAA	-21	NA	131802659	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ES.24510.9	chr4	-	5601	19	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	39.7198522991547	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776398	131650723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663164_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ES.24511.1	chr4	+	187	1	Intergenic	novelGene_20174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGATAATAGATTACA	NA	False	NA	NA	False	NA	NA	NA	131888784	131888971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131888800_131889000
ES.24512.1	chr4	+	175	1	Intergenic	novelGene_20175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACTAATTGG	NA	False	NA	NA	False	NA	NA	NA	131889196	131889371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131889200_131889400
ES.24513.1	chr4	+	158	1	Intergenic	novelGene_20176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAGCAAATA	NA	False	NA	NA	False	NA	NA	NA	131891907	131892065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131891900_131892100
ES.24514.1	chr4	+	173	1	Intergenic	novelGene_20177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	131905149	131905322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131905100_131905300
ES.24514.10	chr4	+	1116	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	-4	2675	-4	379	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACAGGGTGCATAGCT	NA	False	NA	21	True	AATAAA	-15	NA	132001681	132020402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.11	chr4	+	917	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	0	2870	0	184	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTTTGCCTGTGGTT	NA	False	NA	4	True	NA	NA	NA	132001685	132020207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.12	chr4	+	1348	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	0	2439	0	615	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGTGTCCATAGGAC	NA	False	NA	24	True	AATAAA	-20	NA	132001685	132020638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.13	chr4	+	1412	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	1	377	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	224.974813405116	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACACAGGGTGCATAG	NA	False	NA	19	True	AATAAA	-13	NA	132001686	132020400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132010104_132010357_132010730_132011034_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.14	chr4	+	1509	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	1	615	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGTGTCCATAGGAC	NA	False	NA	24	True	AATAAA	-20	NA	132001686	132020638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.15	chr4	+	2579	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	4	1204	4	-1204	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTGTGGCTTCATT	NA	False	NA	NA	False	AATAAA	-28	NA	132001689	132021873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.16	chr4	+	2753	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	11	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232.163316558744	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTGTGGCTTCATT	NA	False	NA	NA	False	AATAAA	-28	NA	132001696	132021873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132007432_132007614_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.17	chr4	+	1304	6	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	-19	615	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	194.272591993827	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTAGTGTCCATAGGAC	NA	False	NA	24	True	AATAAA	-20	NA	132001704	132020638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016716_132019173_132019263_132019937
ES.24514.18	chr4	+	3767	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	19	1	-19	-1	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGACTTGGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	132001704	132023076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.19	chr4	+	1151	6	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	-7	379	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	196.673333220343	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACAGGGTGCATAGCT	NA	False	NA	21	True	AATAAA	-15	NA	132001716	132020402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001869_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.2	chr4	+	302	2	Antisense	novelGene_ENSMUSG00000077323.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	239	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	131905149	132031320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_131905221_132031089
ES.24514.20	chr4	+	1385	6	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	-6	614	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	196.673333220343	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTAGTGTCCATAGGA	NA	False	NA	23	True	AATAAA	-19	NA	132001717	132020637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001869_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.21	chr4	+	3913	7	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGACTTGGGTGGAATTG	NA	False	NA	NA	False	NA	NA	NA	132001721	132023077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.22	chr4	+	2940	6	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	0	359	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	231.588773475745	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGGAGTTATTAATTG	NA	False	NA	1	True	NA	NA	NA	132001726	132020382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132002064_132010104_132010357_132010730_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.23	chr4	+	896	6	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	0	134	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	196.673333220343	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCCCTTTTCCCTGC	NA	False	NA	-46	True	AATAAA	-15	NA	132001726	132020157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001869_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.25	chr4	+	5709	5	ISM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	3709	2675	3668	379	3prime_fragment	FALSE	canonical	3	439	junction_2	36.1317035302793	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACACAGGGTGCATAGCT	NA	False	NA	21	True	AATAAA	-15	NA	132005394	132020402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24514.26	chr4	+	205	1	Intergenic	novelGene_20190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAAACCCATCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	132015464	132015669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132015500_132015700
ES.24514.27	chr4	+	168	1	Intergenic	novelGene_20191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAGAGAGAGATAAT	NA	False	NA	NA	False	NA	NA	NA	132026852	132027020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132026900_132027000
ES.24514.28	chr4	+	331	1	Intergenic	novelGene_20192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACTTAGATTCAGCT	NA	False	NA	NA	False	NA	NA	NA	132031017	132031348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132031000_132031300
ES.24514.29	chr4	+	208	1	Intergenic	novelGene_20193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCAGAGGCAGGTGG	NA	False	NA	40	True	NA	NA	NA	132031018	132031226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132031000_132031200
ES.24514.3	chr4	+	2944	1	Intergenic	novelGene_20179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGCTAAGACAGCCCC	NA	False	NA	NA	False	NA	NA	NA	131916681	131919625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131916700_131919600
ES.24514.4	chr4	+	168	1	Intergenic	novelGene_20180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACAACAACAACAAAA	25	False	NA	NA	False	NA	NA	NA	131921180	131921348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131921200_131921300
ES.24514.5	chr4	+	202	1	Intergenic	novelGene_20184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACCAAGAGATAGCT	6990	False	NA	NA	False	AAGAAA	-11	NA	131930419	131930621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_131930400_131930600
ES.24514.6	chr4	+	1416	1	Antisense	novelGene_ENSMUSG00000040025.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCCTGACAGTTGCTCT	8930	False	NA	NA	False	NA	NA	NA	131932359	131933775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_131932400_131933800
ES.24514.7	chr4	+	196	1	Antisense	novelGene_ENSMUSG00000028901.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACCA	NA	False	NA	NA	False	NA	NA	NA	131949569	131949765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_131949600_131949800
ES.24514.8	chr4	+	1776	1	Antisense	novelGene_ENSMUSG00000028901.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTAAGATAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	131959315	131961091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_131959300_131961100
ES.24514.9	chr4	+	1277	7	NNC	ENSMUSG00000028899.12	novel	777	7	NA	NA	-5	377	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACACAGGGTGCATAG	NA	False	NA	19	True	AATAAA	-13	NA	132001680	132020400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ES.24515.1	chr4	-	881	1	Intergenic	novelGene_20178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTATTACATTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	131908855	131907974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131908000_131908900
ES.24516.1	chr4	-	5274	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	16	-1161	16	1161	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCCTGTTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	131939598	131911061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.10	chr4	-	3805	3	ISM	ENSMUSG00000040025.18	ENSMUST00000102570.5	2536	4	14	-683	0	223	intron_retention	FALSE	canonical	3	871	junction_2	56	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCAGTACCACTTAGT	NA	False	NA	-17	True	AATAAA	-20	NA	131939402	131913377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131914259_131931442_131933027_131938062
ES.24516.11	chr4	-	2330	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	8	1791	8	-15	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTAGGTAGTTTAGG	NA	False	NA	NA	False	NA	NA	NA	131939606	131914013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.13	chr4	-	2260	7	NNC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	24	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	451.048192793433	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAACAAAAATTCCCTCT	NA	False	NA	NA	False	NA	NA	NA	131939378	131914025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131914259_131917896_131918004_131930896_131930960_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.14	chr4	-	2106	4	NIC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	-3	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	439.377590082456	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAACAAAAATTCCCTCT	NA	False	NA	NA	False	NA	NA	NA	131939419	131914025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131914259_131931442_131933027_131938062_131938143_131939210
ES.24516.16	chr4	-	2162	5	NNC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	409.263362640733	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTAAACAAAAATTCCCT	NA	False	NA	NA	False	NA	NA	NA	131939415	131914027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938805_131939210
ES.24516.17	chr4	-	6073	2	NNC	ENSMUSG00000040025.18	novel	520	3	NA	NA	17798	28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAACCTAAACAAAAAT	9449	False	NA	NA	False	NA	NA	NA	131920322	131914032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131918341_131918557
ES.24516.18	chr4	-	474	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	24	457	24	3	multi-exon	FALSE	canonical	3	30	junction_1	419.072255769283	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	131939378	131914057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ES.24516.2	chr4	-	4086	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	45	-2	45	2	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCCTGCATGTATATT	NA	False	NA	NA	False	ATTAAA	-21	NA	131939569	131912220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.20	chr4	-	2089	4	NNC	ENSMUSG00000040025.18	novel	2536	4	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	439.377590082456	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGGAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	131939429	131914064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131914259_131931442_131933027_131938062_131938143_131939198
ES.24516.22	chr4	-	2120	1	Intergenic	novelGene_20181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	561	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAACCAAA	3538	False	NA	NA	False	NA	NA	NA	131926233	131924113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131924100_131926200
ES.24516.23	chr4	-	1844	2	Intergenic	novelGene_20182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAACCAAA	5733	False	NA	NA	False	NA	NA	NA	131931441	131924113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131925063_131930546
ES.24516.24	chr4	-	1230	1	Intergenic	novelGene_20183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	561	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGCTAATCCAA	3533	False	NA	NA	False	NA	NA	NA	131926238	131925008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131925000_131926200
ES.24516.25	chr4	-	5329	4	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	209	15775	-3	-13937	5prime_fragment	FALSE	canonical	3	863	junction_3	46.783187863448	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCCCTTGCCTTTTGATG	NA	False	NA	NA	False	ATTAAA	-18	NA	131939405	131927997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.26	chr4	-	1955	4	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	241	19117	29	-17279	5prime_fragment	FALSE	canonical	3	863	junction_3	46.783187863448	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGGTGTGATTTAGC	NA	False	NA	NA	False	AATAAA	-9	NA	131939373	131931339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.3	chr4	-	3363	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	185	581	-13	-581	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGTCTTTACTCTTAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	131939429	131912803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.4	chr4	-	2975	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	13	1141	13	237	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTATTATTTGAGTCTC	NA	False	NA	-3	True	AATAAA	-34	NA	131939601	131913363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24516.5	chr4	-	1215	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	-27	-233	-13	233	multi-exon	FALSE	canonical	3	30	junction_1	419.072255769283	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTAGTATTATTTGAG	NA	False	NA	-7	True	AATAAA	-30	NA	131939429	131913367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ES.24516.6	chr4	-	2759	5	NNC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	-19	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	409.263362640733	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACTTAGTATTATTTG	NA	False	NA	-9	True	AATAAA	-28	NA	131939435	131913369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939254
ES.24516.8	chr4	-	2821	5	NNC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	-4	226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	409.263362640733	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939420	131913374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938806_131939210
ES.24516.9	chr4	-	2721	6	NNC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	-3	223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.47199086876	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCAGTACCACTTAGT	NA	False	NA	-17	True	AATAAA	-20	NA	131939405	131913377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131913995_131914038_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ES.24517.1	chr4	-	4979	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-29	-318	-29	318	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATGTCATTGGTTTC	1964	False	NA	NA	False	NA	NA	NA	131988861	131949938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
ES.24517.11	chr4	-	4046	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	2	62	intron_retention	FALSE	canonical	3	10	junction_8	19.3245310421754	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGGCTGTCATGGAG	1914	False	NA	NA	False	TATAAA	-15	NA	131988911	131952267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ES.24517.12	chr4	-	1914	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	46	-35	-35	35	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAAATCTCGTTGTAAC	1958	False	NA	-23	True	NA	NA	NA	131988867	131952946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ES.24517.15	chr4	-	1923	11	NNC	ENSMUSG00000028901.14	novel	4632	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.4057080200494	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1974	False	NA	-58	True	NA	NA	NA	131988851	131952981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979141_131979741_131979805_131988801
ES.24517.16	chr4	-	1831	9	NNC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	24.3794867665421	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1920	False	NA	-58	True	NA	NA	NA	131988905	131952981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131978985_131979141_131988801
ES.24517.20	chr4	-	3296	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	38	0	intron_retention	FALSE	canonical	3	10	junction_8	19.3245310421754	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1950	False	NA	-58	True	NA	NA	NA	131988875	131952981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ES.24517.22	chr4	-	177	1	Intergenic	novelGene_20185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATAATAGTACTGCT	1396	False	NA	NA	False	NA	NA	NA	131966679	131966502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131966500_131966700
ES.24517.23	chr4	-	3411	1	Intergenic	novelGene_20186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCCAGGCAGTGGTGG	2828	False	NA	NA	False	NA	NA	NA	131987997	131984586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131984600_131988000
ES.24517.4	chr4	-	4702	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-82	12	-1	-12	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1911	False	NA	NA	False	AATAAA	-18	NA	131988914	131950268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
ES.24517.5	chr4	-	4409	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	-10	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	26.5094322836231	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATAAGTACTAAACGC	1983	False	NA	NA	False	AATAAA	-18	NA	131988842	131950268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ES.24517.7	chr4	-	4703	1	NIC	ENSMUSG00000028901.14	novel	6523	10	NA	NA	7242	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATGTATAAGTACTAA	5361	False	NA	NA	False	AATAAA	-14	NA	131954975	131950272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131950300_131955000
ES.24517.8	chr4	-	4524	9	NIC	ENSMUSG00000028901.14	novel	1925	10	NA	NA	27	-16	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	25.6795151823394	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATGTATAAGTACTAA	1939	False	NA	NA	False	AATAAA	-14	NA	131988886	131950272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131978985_131979144_131988801
ES.24517.9	chr4	-	5327	4	ISM	ENSMUSG00000028901.14	ENSMUST00000030733.9	2485	9	18273	-2054	1327	-19	3prime_fragment	FALSE	canonical	3	57	junction_3	2.05480466765633	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTCTATGTATAAGTAC	7185	False	NA	NA	False	AATAAA	-11	NA	131960890	131950275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322
ES.24518.1	chr4	-	179	1	Intergenic	novelGene_20187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACAAAACAAGGGCT	325	False	NA	NA	False	NA	NA	NA	131990500	131990321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131990300_131990500
ES.24519.1	chr4	-	153	1	Intergenic	novelGene_20188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAAACACACCCTCT	NA	False	NA	NA	False	NA	NA	NA	131992518	131992365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131992400_131992500
ES.2452.1	chr10	-	679	3	Intergenic	novelGene_1865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTGGTGTCAGTGGCT	NA	False	NA	-25	True	AGTAAA	-12	NA	21934530	21930761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21931017_21933427_21933570_21934248
ES.2452.2	chr10	-	240	1	Intergenic	novelGene_1866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTCTACTTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	21932980	21932740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_21932700_21933000
ES.24520.1	chr4	-	178	1	Intergenic	novelGene_20189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAGTTGAAGAC	NA	False	NA	NA	False	NA	NA	NA	131996948	131996770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_131996800_131996900
ES.24521.1	chr4	-	2911	1	Genic_Genomic	ENSMUSG00000089687.3	novel	NA	NA	NA	NA	32	1754	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGTTGTGTTTTGAGA	NA	False	NA	NA	False	AATAAA	-21	NA	132030664	132027753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_132027800_132030700
ES.24521.2	chr4	-	2510	2	FSM	ENSMUSG00000089687.3	ENSMUST00000040411.7	761	2	-1	-1748	-1	1748	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGTATGTTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	132030697	132027759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132029994_132030421
ES.24522.1	chr4	-	175	1	Intergenic	novelGene_20194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132033873	132033698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132033700_132033900
ES.24523.1	chr4	+	618	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	-10	-2	-8	2	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTATTTATTTATT	NA	False	NA	29	True	AATAAA	-18	NA	132035978	132038337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ES.24523.2	chr4	+	450	2	FSM	ENSMUSG00000086290.10	ENSMUST00000182826.2	509	2	53	6	53	-4	multi-exon	FALSE	canonical	3	202	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTCCTCTTTTTTATT	NA	False	NA	21	True	AATAAA	-10	NA	132037550	132038329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132037816_132038144
ES.24523.3	chr4	+	575	1	FSM	ENSMUSG00000080615.3	ENSMUST00000116965.3	74	1	-239	-262	-239	262	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTATTTATTTATT	NA	False	NA	29	True	AATAAA	-18	NA	132037762	132038337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132037800_132038300
ES.24524.1	chr4	-	4208	7	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	451	junction_6	38.2524509018703	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2346	False	NA	0	True	AATAAA	-17	NA	132056819	132039073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132055878_132056663
ES.24524.10	chr4	-	1017	8	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	235.327995160207	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2367	False	NA	-2	True	AATAAA	-15	NA	132056798	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132056663
ES.24524.11	chr4	-	1208	10	NNC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	214.496712110402	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2357	False	NA	-2	True	AATAAA	-15	NA	132056808	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056001_132056123_132056663
ES.24524.12	chr4	-	1685	7	NIC	ENSMUSG00000028898.16	novel	1791	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	46	junction_6	181.154630081596	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2346	False	NA	-2	True	AATAAA	-15	NA	132056819	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132053357_132056663
ES.24524.13	chr4	-	1168	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	220.972813655888	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2314	False	NA	-2	True	AATAAA	-15	NA	132056851	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132055779_132055878_132056663
ES.24524.14	chr4	-	8332	5	NIC	ENSMUSG00000028898.16	novel	1791	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	451	junction_4	35.7936796096741	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2310	False	NA	-2	True	AATAAA	-15	NA	132056855	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132041338_132041515_132041679_132046765_132049122_132052518_132055878_132056663
ES.24524.15	chr4	-	1262	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	451	junction_7	38.4872096432367	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2358	False	NA	-4	True	AATAAA	-13	NA	132056807	132039077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ES.24524.16	chr4	-	898	7	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	188.905399605199	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2346	False	NA	-4	True	AATAAA	-13	NA	132056819	132039077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132056663
ES.24524.17	chr4	-	1703	5	NNC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.302895635585	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2326	False	NA	-4	True	AATAAA	-13	NA	132056839	132039077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132039860_132052024_132052572_132053256_132053357_132055779_132055878_132056663
ES.24524.18	chr4	-	4990	6	ISM	ENSMUSG00000028898.16	ENSMUST00000146166.8	1791	8	8	2	-4	-2	intron_retention	FALSE	canonical	3	478	junction_3	28.0741874325865	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGGCTTCTTCAACT	2346	False	NA	-4	True	AATAAA	-13	NA	132056819	132039077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518
ES.24524.19	chr4	-	1009	9	NNC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	167.226595896107	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTGGGCTTCTTCAAC	2357	False	NA	-5	True	AATAAA	-12	NA	132056808	132039078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132049064_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ES.24524.2	chr4	-	1035	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2311	False	NA	-2	True	AATAAA	-15	NA	132056854	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
ES.24524.20	chr4	-	3584	1	NIC	ENSMUSG00000028898.16	novel	961	8	NA	NA	-1080	-1094	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCTGGTCACTATTTTA	5498	False	NA	NA	False	NA	NA	NA	132053667	132050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132050100_132053700
ES.24524.3	chr4	-	1137	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	-9	2	-9	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2307	False	NA	-2	True	AATAAA	-15	NA	132056858	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ES.24524.4	chr4	-	825	7	NIC	ENSMUSG00000028898.16	novel	961	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	186.504393752235	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2367	False	NA	-2	True	AATAAA	-15	NA	132056798	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ES.24524.5	chr4	-	1236	10	FSM	ENSMUSG00000028898.16	ENSMUST00000147652.8	1017	10	-119	-100	-4	0	multi-exon	FALSE	canonical	3	16	junction_6	205.952229868128	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2346	False	NA	-2	True	AATAAA	-15	NA	132056819	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132055779_132055878_132056663
ES.24524.6	chr4	-	1099	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	242.984792476813	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2385	False	NA	-2	True	AATAAA	-15	NA	132056780	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132056663
ES.24524.7	chr4	-	998	8	NIC	ENSMUSG00000028898.16	novel	1791	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	176.968693184266	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2346	False	NA	-2	True	AATAAA	-15	NA	132056819	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132055779_132055878_132056663
ES.24524.8	chr4	-	1603	8	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	16	junction_6	225.555097572226	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2337	False	NA	-2	True	AATAAA	-15	NA	132056828	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132053357_132056663
ES.24524.9	chr4	-	1303	9	NIC	ENSMUSG00000028898.16	novel	1017	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	21	junction_6	164.953734043822	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2370	False	NA	-2	True	AATAAA	-15	NA	132056795	132039075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052801_132053256_132053357_132055779_132055878_132056663
ES.24525.1	chr4	+	391	1	Intergenic	novelGene_20195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGCCTGGTCTACAA	NA	False	NA	NA	False	NA	NA	NA	132063617	132064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132063600_132064000
ES.24526.1	chr4	+	436	1	Intergenic	novelGene_20196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACATTT	NA	False	NA	NA	False	TTTAAA	-15	NA	132074350	132074786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132074400_132074800
ES.24527.1	chr4	-	2298	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	-3	-10	-3	10	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGTGTCCATGGAGTTGC	5436	False	NA	0	True	AATAAA	-31	NA	132073061	132059219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ES.24527.10	chr4	-	3821	11	Fusion	ENSMUSG00000028896.14_ENSMUSG00000065353.3_ENSMUSG00000064387.3	novel	2326	11	NA	NA	94	0	intron_retention	FALSE	canonical	1	2	junction_6	190.14373510584	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132080822	132059233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063256_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432
ES.24527.11	chr4	-	2537	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-29	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_11	255.960107026249	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCTTTGTTTTTATGC	NA	False	NA	-16	True	AATAAA	-15	NA	132080945	132059235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079930_132080010_132080907
ES.24527.12	chr4	-	4068	8	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	372	junction_7	26.2888196923393	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5475	False	NA	-17	True	AATAAA	-14	NA	132073022	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132067318_132072956
ES.24527.13	chr4	-	2507	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-43	-3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	False	NA	-17	True	AATAAA	-14	NA	132080959	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
ES.24527.14	chr4	-	2967	7	NIC	ENSMUSG00000028896.14	novel	2285	10	NA	NA	1	-3	intron_retention	FALSE	canonical	2	12	junction_5	146.160585202259	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5486	False	NA	-17	True	AATAAA	-14	NA	132073011	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132067235_132067318_132072956
ES.24527.15	chr4	-	2899	10	NNC	ENSMUSG00000028896.14	novel	2285	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.208466625289	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5492	False	NA	-17	True	AATAAA	-14	NA	132073005	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063447_132064689_132065222_132065361_132065550_132067235_132067318_132072956
ES.24527.17	chr4	-	2048	9	NIC	ENSMUSG00000028896.14	novel	2285	10	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	138.533163899479	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5489	False	NA	-17	True	AATAAA	-14	NA	132073008	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065361_132065550_132067235_132067318_132072956
ES.24527.18	chr4	-	5587	5	NNC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_3	179.928284324616	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5482	False	NA	-17	True	AATAAA	-14	NA	132073015	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132061417_132061571_132061795_132063455_132064678_132067318_132072956
ES.24527.19	chr4	-	2538	10	NNC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	4	-3	intron_retention	FALSE	canonical	1	2	junction_5	176.700905137872	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	5489	False	NA	-17	True	AATAAA	-14	NA	132073008	132059236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132061417_132061571_132061795_132062212_132062729_132062853_132063027_132063256_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
ES.24527.2	chr4	-	1652	6	NNC	ENSMUSG00000028896.14	novel	2285	10	NA	NA	5101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	194.176620631836	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTATGCGTGTCC	NA	False	NA	-10	True	AATAAA	-21	NA	132062142	132059229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132060928_132061052_132061151_132061237_132061417_132061571_132061795_132061916_132062055
ES.24527.22	chr4	-	3906	9	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	2	-4	intron_retention	FALSE	canonical	3	372	junction_8	35.7762141652803	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGGCTTTGTTTTTAT	5496	False	NA	-18	True	AATAAA	-13	NA	132073001	132059237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132067318_132072956
ES.24527.24	chr4	-	4591	7	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	372	junction_6	28.009918878061	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGGGCTTTGTTTTTA	5468	False	NA	-19	True	AATAAA	-12	NA	132073029	132059238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062853_132063027_132063125_132065041_132067318_132072956
ES.24527.25	chr4	-	813	2	ISM	ENSMUSG00000028896.14	ENSMUST00000155129.2	507	6	-29	14101	-29	-12433	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTGTGTGTGTGAG	NA	False	NA	0	True	ATTAAA	-24	NA	132080945	132079234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132080010_132080907
ES.24527.26	chr4	-	445	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	1	-9	1	9	multi-exon	FALSE	canonical	3	959	junction_1	21	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTGTGTGTGTGAG	NA	False	NA	0	True	ATTAAA	-24	NA	132080996	132079234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132079555_132079973_132080010_132080907
ES.24527.27	chr4	-	1743	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-1150	-388	-1150	388	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080987	132079244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132079200_132081000
ES.24527.28	chr4	-	396	3	NNC	ENSMUSG00000085241.8	novel	426	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	475.5	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132079555_132079973_132080023_132080907
ES.24527.29	chr4	-	427	3	NNC	ENSMUSG00000085241.8	novel	437	3	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	497.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCCTGTGATTTAATG	NA	False	NA	-12	True	ATTAAA	-12	NA	132080949	132079246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132079596_132079973_132080010_132080907
ES.24527.3	chr4	-	2637	6	NNC	ENSMUSG00000028896.14	novel	2285	10	NA	NA	2113	0	intron_retention	FALSE	non_canonical	0	0	junction_5	170.577137975756	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTATGCGTGTCC	NA	False	NA	-10	True	AATAAA	-21	NA	132065130	132059229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132061417_132061571_132061795_132062212_132062729_132062853_132063027_132063446_132064687
ES.24527.30	chr4	-	411	2	ISM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	-1	392	-1	-322	5prime_fragment	FALSE	canonical	3	1001	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTAAATTCCTAAGG	NA	False	NA	NA	False	NA	NA	NA	132080945	132079636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132080010_132080907
ES.24527.4	chr4	-	2332	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	-51	-3	-9	-1	multi-exon	FALSE	canonical	3	61	junction_9	136.55039362814	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTTATGCGTGTC	5430	False	NA	-11	True	AATAAA	-20	NA	132073067	132059230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
ES.24527.5	chr4	-	6385	6	NNC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	171.175932887775	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTTATGCGTGTC	5495	False	NA	-11	True	AATAAA	-20	NA	132073002	132059230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132061571_132061795_132061916_132062055_132063447_132064689_132065222_132065361_132067318_132072956
ES.24527.6	chr4	-	6690	5	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	-13	2	intron_retention	FALSE	canonical	3	372	junction_4	29.9614335438076	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGTTTTTATGCGTGT	5468	False	NA	-12	True	AATAAA	-19	NA	132073029	132059231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132067318_132072956
ES.24527.7	chr4	-	2926	11	NNC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	25	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	198.572304211841	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5519	False	NA	-14	True	AATAAA	-17	NA	132072978	132059233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132060314_132061151_132061237_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072316
ES.24527.8	chr4	-	3227	10	NIC	ENSMUSG00000028896.14	novel	2278	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	61	junction_8	119.037290557245	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5496	False	NA	-14	True	AATAAA	-17	NA	132073001	132059233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132066553_132067235_132067318_132072956
ES.24527.9	chr4	-	2536	14	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	296.744127023732	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132080946	132059233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
ES.24528.1	chr4	+	342	1	Intergenic	novelGene_20198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	NA	False	NA	NA	False	NA	NA	NA	132100164	132100506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132100200_132100500
ES.24529.1	chr4	+	2082	2	Intergenic	novelGene_20199	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATGCTGGGATACA	NA	False	NA	NA	False	NA	NA	NA	132110938	132229069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132112952_132229000
ES.24529.2	chr4	+	197	1	Intergenic	novelGene_20200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	132113754	132113951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132113800_132114000
ES.24529.3	chr4	+	285	1	Intergenic	novelGene_20201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAAAGTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	132122704	132122989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132122700_132123000
ES.24529.4	chr4	+	169	1	Intergenic	novelGene_20204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGAGTT	NA	False	NA	NA	False	NA	NA	NA	132143791	132143960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132143800_132144000
ES.24529.5	chr4	+	5853	2	Intergenic	novelGene_20207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCCGGCGTAGTGGCA	NA	False	NA	NA	False	NA	NA	NA	132211728	132217790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132214249_132214457
ES.24529.6	chr4	+	177	1	Intergenic	novelGene_20208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGACA	NA	False	NA	NA	False	NA	NA	NA	132212857	132213034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132212900_132213000
ES.24529.7	chr4	+	283	1	Intergenic	novelGene_20209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAACAGGAAAATGAGC	NA	False	NA	NA	False	AATAAA	-45	NA	132212858	132213141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132212900_132213100
ES.2453.1	chr10	+	1360	2	Intergenic	novelGene_1867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGGTCTGGGAAAGAG	NA	False	NA	NA	False	AATAAA	-12	NA	21934776	21941276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_21934897_21940036
ES.2453.2	chr10	+	229	1	Intergenic	novelGene_1868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGCAGGAGTCCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	21936472	21936701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_21936500_21936700
ES.24530.1	chr4	-	4688	14	FSM	ENSMUSG00000066043.14	ENSMUST00000102568.10	4614	14	-72	-2	-72	2	multi-exon	FALSE	canonical	2	21	junction_11	24.1391430016078	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTGTTACTTTTTAC	NA	False	NA	NA	False	ATTAAA	-25	NA	132149872	132083231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
ES.24530.11	chr4	-	5120	13	NIC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	47	-2	intron_retention	FALSE	canonical	2	21	junction_10	24.1223732018408	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAACTGAATTTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	132149705	132083242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
ES.24530.12	chr4	-	3802	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	6	675	1	-675	multi-exon	FALSE	canonical	3	61	junction_10	11.8591268181468	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTCTGTCAAGTCTGT	NA	False	NA	NA	False	AGTAAA	-13	NA	132149751	132083915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
ES.24530.13	chr4	-	761	5	ISM	ENSMUSG00000066043.14	ENSMUST00000084249.11	2349	13	32584	-395	4904	395	3prime_fragment	FALSE	canonical	3	78	junction_4	8.49632273398321	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCGGACACACCAGCCCT	NA	False	NA	NA	False	NA	NA	NA	132092938	132085164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885
ES.24530.14	chr4	-	208	1	Intergenic	novelGene_20197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCAGAGGTCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	132090070	132089862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132089900_132090100
ES.24530.15	chr4	-	170	1	Intergenic	novelGene_20202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTC	NA	False	NA	NA	False	NA	NA	NA	132127113	132126943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132126900_132127100
ES.24530.16	chr4	-	153	1	Intergenic	novelGene_20203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	7042	False	NA	NA	False	NA	NA	NA	132141882	132141729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132141700_132141900
ES.24530.17	chr4	-	2617	1	NIC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	20	-42344	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAGAAGATGATTAAAGG	NA	False	NA	NA	False	NA	NA	NA	132149732	132147115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132147100_132149700
ES.24530.18	chr4	-	178	1	Intergenic	novelGene_20205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTGAACACA	NA	False	NA	NA	False	NA	NA	NA	132156147	132155969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132156000_132156100
ES.24530.2	chr4	-	4637	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	-147	-7	-104	0	multi-exon	FALSE	canonical	3	61	junction_10	11.8591268181468	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132149904	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
ES.24530.3	chr4	-	5073	12	NIC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	22	0	intron_retention	FALSE	canonical	3	61	junction_9	11.2917727674358	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132149730	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
ES.24530.4	chr4	-	4450	13	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.220618477323	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132149732	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105860_132114202_132114377_132140380_132140435_132149655
ES.24530.5	chr4	-	4503	13	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	-16780	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.6462161166146	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132166580	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132166465
ES.24530.6	chr4	-	4707	15	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.3955031983516	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132149741	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132099986_132100139_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
ES.24530.7	chr4	-	4555	14	NNC	ENSMUSG00000066043.14	novel	4614	14	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.2453671640098	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTTGTGTTACTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	132149695	132083233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132085596_132087785_132087863_132087946_132088074_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
ES.24530.8	chr4	-	4696	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084249.11	2349	13	-28	-2319	-28	0	multi-exon	FALSE	canonical	0	0	junction_12	31.9820913429167	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGAATTTGTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	132125550	132083240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132125262
ES.24531.1	chr4	-	183	1	Intergenic	novelGene_20206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	9531	False	NA	NA	False	NA	NA	NA	132177061	132176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132176900_132177100
ES.24532.1	chr4	-	1726	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	-49	-2	-49	2	multi-exon	FALSE	canonical	3	250	junction_2	8.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGATTCTGATTCTTA	998	False	NA	-13	True	AATAAA	-15	NA	132191281	132186039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132187425_132190175_132190320_132191084
ES.24532.2	chr4	-	4364	2	NIC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	64	2	intron_retention	FALSE	canonical	3	250	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGATTCTGATTCTTA	1111	False	NA	-13	True	AATAAA	-15	NA	132191168	132186039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132190320_132191084
ES.24532.3	chr4	-	1623	4	NNC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.055542912051	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGATTCTGATTCTTA	1061	False	NA	-13	True	AATAAA	-15	NA	132191218	132186039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132186356_132186395_132187425_132190175_132190320_132191084
ES.24532.4	chr4	-	4564	1	NIC	ENSMUSG00000066042.5	novel	1675	3	NA	NA	37	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1674	False	NA	-15	True	AATAAA	-13	NA	132190605	132186041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132186000_132190600
ES.24532.6	chr4	-	1207	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	30	438	30	-438	multi-exon	FALSE	canonical	3	250	junction_2	8.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAACAACTCATAATA	1077	False	NA	NA	False	AATAAA	-21	NA	132191202	132186479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132187425_132190175_132190320_132191084
ES.24533.1	chr4	-	3456	11	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	37	5086	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	310.094324359541	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCCTCTTCAAGGTG	NA	False	NA	NA	False	AATAAA	-1	NA	132237775	132214256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132214281_132219345_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229937_132237374
ES.24533.10	chr4	-	3396	11	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.200104079911	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237772	132219342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132219591_132219629_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.11	chr4	-	5536	8	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_5	278.505633255599	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTAATGGGATGT	NA	False	NA	-32	True	AATAAA	-21	NA	132237781	132219343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132227076_132227275_132229873_132229940_132237374
ES.24533.13	chr4	-	4501	10	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	246.883238259168	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTAATGGGATGT	NA	False	NA	-32	True	AATAAA	-21	NA	132237815	132219343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132221114_132221774_132221920_132223171_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.15	chr4	-	3438	10	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	252.909489494845	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTAATGGGATGT	NA	False	NA	-32	True	AATAAA	-21	NA	132237782	132219343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225269_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.17	chr4	-	5296	1	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	13173	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	838	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTAATGGGATGT	NA	False	NA	-32	True	AATAAA	-21	NA	132224639	132219343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132219300_132224600
ES.24533.19	chr4	-	5843	8	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	666	junction_3	61.7169311602313	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGCTAATGGGATG	NA	False	NA	-33	True	AATAAA	-20	NA	132237811	132219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132224387_132224682_132224802_132225263_132225415_132226247_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.2	chr4	-	177	1	Intergenic	novelGene_20210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAATAA	6015	False	NA	NA	False	NA	NA	NA	132214454	132214277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132214300_132214500
ES.24533.20	chr4	-	6180	8	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	31	-2	intron_retention	FALSE	canonical	3	731	junction_5	45.7896699873565	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGCTAATGGGATG	NA	False	NA	-33	True	AATAAA	-20	NA	132237781	132219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132224387_132224682_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.22	chr4	-	5748	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	666	junction_3	57.9125148391952	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGCTAATGGGATG	NA	False	NA	-33	True	AATAAA	-20	NA	132237811	132219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.23	chr4	-	3430	10	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	252.402578688085	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGCTAATGGGATG	NA	False	NA	-33	True	AATAAA	-20	NA	132237777	132219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229932_132237374
ES.24533.24	chr4	-	4232	8	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	666	junction_3	62.2385142260098	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGCTAATGGGATG	NA	False	NA	-33	True	AATAAA	-20	NA	132237815	132219344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.25	chr4	-	3532	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	35	-3	intron_retention	FALSE	canonical	3	666	junction_4	63.1169549328863	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCTTTGCTAATGGGAT	NA	False	NA	-34	True	AATAAA	-19	NA	132237777	132219345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.26	chr4	-	2696	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	15	764	15	-764	multi-exon	FALSE	canonical	3	666	junction_4	59.9637750728526	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCCTTTCTTAGGTGA	NA	False	NA	NA	False	NA	NA	NA	132237797	132220106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.27	chr4	-	2498	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	-3	980	-3	-980	multi-exon	FALSE	canonical	3	666	junction_4	59.9637750728526	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGGAGCCCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	132237815	132220322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.28	chr4	-	2383	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	0	1092	0	-1092	multi-exon	FALSE	canonical	3	666	junction_4	59.9637750728526	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGGTTCAGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	132237812	132220434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.29	chr4	-	3503	8	ISM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	40	2869	40	-2869	5prime_fragment	FALSE	canonical	3	666	junction_2	53.7871845748576	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTATATGACTGGAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	132237772	132222211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.3	chr4	-	3511	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	-22	-14	-22	14	multi-exon	FALSE	canonical	3	666	junction_4	59.9637750728526	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGTCCATTTCCTGA	NA	False	NA	-17	True	AATAAA	-36	NA	132237834	132219328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.30	chr4	-	2075	9	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	32	-4113	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	255.128276559067	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATCTTGTTAAATC	NA	False	NA	NA	False	AATAAA	-17	NA	132237780	132223455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132224004_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.31	chr4	-	1590	9	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	39	-4591	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	255.128276559067	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGCACTCTTTGTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	132237773	132223933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132224004_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.32	chr4	-	1867	2	Genic_Genomic	ENSMUSG00000086997.2	novel	622	2	NA	NA	-813	-778	multi-exon	FALSE	non_canonical	0	0	junction_1	0	735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	132237773	132231649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_132231708_132235964
ES.24533.4	chr4	-	3785	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	39	11	intron_retention	FALSE	canonical	3	666	junction_4	61.1223158919883	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGTTTGTCCATTTCC	NA	False	NA	-20	True	AATAAA	-33	NA	132237773	132219331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132227275_132229873_132229940_132237374
ES.24533.5	chr4	-	3418	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	266.922712362586	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGATGTTTGTCCATTT	NA	False	NA	-22	True	AATAAA	-31	NA	132237812	132219333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132237374
ES.24533.7	chr4	-	4136	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	7	7	intron_retention	FALSE	canonical	3	666	junction_3	58.4101874675985	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGGGATGTTTGTCCAT	NA	False	NA	-24	True	AATAAA	-29	NA	132237805	132219335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.8	chr4	-	3508	10	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	252.097178989216	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237815	132219342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226491_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24533.9	chr4	-	4296	9	NNC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	42	0	intron_retention	FALSE	canonical	1	1	junction_5	262.02501669688	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237770	132219342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132226491_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ES.24534.1	chr4	-	192	1	Intergenic	novelGene_20211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGACAGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	132240471	132240279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132240300_132240500
ES.24535.1	chr4	+	201	1	Intergenic	novelGene_20212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAGAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	132246100	132246301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132246100_132246300
ES.24536.1	chr4	+	178	1	Intergenic	novelGene_20213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGTGATAGG	NA	False	NA	NA	False	NA	NA	NA	132252852	132253030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132252900_132253000
ES.24537.1	chr4	+	235	1	Intergenic	novelGene_20214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTTTTGGGTTAA	NA	False	NA	NA	False	AAAAAG	-23	NA	132254928	132255163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132254900_132255200
ES.24538.1	chr4	-	3667	1	Genic_Genomic	ENSMUSG00000054428.13	novel	NA	NA	NA	NA	11	637	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAAAAAAAAGTTGGT	9316	False	NA	NA	False	NA	NA	NA	132260895	132257228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_132257200_132260900
ES.24538.10	chr4	-	394	2	NIC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-18	-7	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCCTGATGCCTTCT	9287	False	NA	-27	True	AATAAA	-12	NA	132260924	132257872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132258135_132260792
ES.24538.11	chr4	-	1290	4	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-1844	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3849.40887236815	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTGCCTGATGCCTTC	7397	False	NA	-28	True	AATAAA	-11	NA	132262814	132257873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132258135_132260606_132260699_132260792_132260965_132262049
ES.24538.13	chr4	-	585	4	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	3701.94195284343	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAACTTGCCTGATGCCT	9304	False	NA	-30	True	AATAAA	-9	NA	132260907	132257875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132258135_132260373_132260493_132260606_132260699_132260792
ES.24538.14	chr4	-	2164	1	NIC	ENSMUSG00000054428.13	novel	539	3	NA	NA	21	-920	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCACGGTGTTGCACA	9262	False	NA	NA	False	NA	NA	NA	132260949	132258785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132258800_132260900
ES.24538.15	chr4	-	2026	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	1	-1013	1	-920	multi-exon	FALSE	canonical	3	7869	junction_1	0	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATCACGGTGTTGCACA	9306	False	NA	NA	False	NA	NA	NA	132260905	132258785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132260699_132260792
ES.24538.16	chr4	-	1642	2	NNC	ENSMUSG00000054428.13	novel	1014	2	NA	NA	0	-955	intron_retention	TRUE	non_canonical	0	0	junction_1	0	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATGTAAAAAAAAAAA	9305	False	NA	NA	False	NA	NA	NA	132260906	132258820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132259274_132259717
ES.24538.17	chr4	-	135	1	Intergenic	novelGene_20215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTTAAAAAAAG	2288	False	NA	NA	False	NA	NA	NA	132259321	132259186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132259200_132259300
ES.24538.18	chr4	-	1058	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	-21	-23	-21	23	multi-exon	FALSE	canonical	3	7869	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTATCAGGGGGCTGGTG	9284	False	NA	NA	False	NA	NA	NA	132260927	132259775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132260699_132260792
ES.24538.6	chr4	-	2993	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	-50	-1929	14	-4	multi-exon	FALSE	canonical	3	7869	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGATGCCTTCTACT	9255	False	NA	-24	True	AATAAA	-15	NA	132260956	132257869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132260699_132260792
ES.24538.7	chr4	-	3066	1	NIC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-29	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGATGCCTTCTACT	9276	False	NA	-24	True	AATAAA	-15	NA	132260935	132257869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132257900_132260900
ES.24538.8	chr4	-	454	3	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	3917.5	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTGATGCCTTCTA	9311	False	NA	-26	True	AATAAA	-13	NA	132260900	132257871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132258135_132260615_132260699_132260792
ES.24538.9	chr4	-	577	4	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3708.30368527474	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCCTGATGCCTTCT	9301	False	NA	-27	True	AATAAA	-12	NA	132260910	132257872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132258135_132260067_132260173_132260606_132260699_132260792
ES.24539.1	chr4	+	1416	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	-14	-1	-14	1	multi-exon	FALSE	canonical	3	2684	junction_8	233.065676097962	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTCTCCTCCTCGGGTG	2317	False	NA	20	True	AATAAA	-20	NA	132262846	132281054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.10	chr4	+	1287	8	FSM	ENSMUSG00000054405.15	ENSMUST00000138334.8	613	8	-78	-596	-5	-7	multi-exon	FALSE	canonical	3	13	junction_4	1070.81689206256	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2343	False	NA	12	True	AATAAA	-12	NA	132262872	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.14	chr4	+	5549	6	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	-5	46	intron_retention	FALSE	canonical	3	2684	junction_5	217.073628062001	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGTAATCCTTTGTACA	2343	False	NA	19	True	AATACA	-13	NA	132262872	132280577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.15	chr4	+	1108	9	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	-4	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1036.12335625397	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTGCCCCGACTCC	2344	False	NA	13	True	ATTAAA	-13	NA	132262873	132280782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132262975_132265497_132265604_132269105_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.16	chr4	+	1863	9	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	40	junction_1	1008.37169951115	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2345	False	NA	12	True	AATAAA	-12	NA	132262874	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132263458_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.18	chr4	+	3593	8	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	3	-5	intron_retention	FALSE	canonical	3	2684	junction_7	243.214778686306	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGATGGTCTCCTCCT	2351	False	NA	14	True	AATAAA	-14	NA	132262880	132281048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.19	chr4	+	3498	7	NIC	ENSMUSG00000054405.15	novel	613	8	NA	NA	3	-5	intron_retention	FALSE	canonical	3	13	junction_3	1126.21297571404	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGATGGTCTCCTCCT	2351	False	NA	14	True	AATAAA	-14	NA	132262880	132281048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132271434_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.2	chr4	+	1192	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	-14	223	-14	61	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGAGGCCCTTGCTCC	2317	False	NA	61	True	NA	NA	NA	132262846	132280830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.20	chr4	+	998	6	ISM	ENSMUSG00000054405.15	ENSMUST00000150207.8	932	8	-86	6236	-3	576	5prime_fragment	FALSE	canonical	3	2894	junction_4	181.8960142499	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTCCAG	2354	False	NA	NA	False	AATAAA	-11	NA	132262883	132274533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947
ES.24539.21	chr4	+	1532	10	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	1257.77332154688	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2357	False	NA	12	True	AATAAA	-12	NA	132262886	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132263293_132263458_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.22	chr4	+	1477	10	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	1298.89284287964	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2357	False	NA	12	True	AATAAA	-12	NA	132262886	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132279351_132279461_132280327
ES.24539.23	chr4	+	1270	10	NNC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1441.58090517766	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTGCCCCGACTCC	2357	False	NA	13	True	ATTAAA	-13	NA	132262886	132280782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132262975_132263293_132263458_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278843_132278922_132280327
ES.24539.24	chr4	+	1636	8	FSM	ENSMUSG00000054405.15	ENSMUST00000142281.8	1837	8	11	190	1	13	multi-exon	FALSE	canonical	3	2684	junction_7	240.501516818162	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTGCCCCGACTCC	2359	False	NA	13	True	ATTAAA	-13	NA	132262888	132280782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.26	chr4	+	3844	7	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	-1	-7	intron_retention	FALSE	canonical	2	136	junction_2	1092.03464536006	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2361	False	NA	12	True	AATAAA	-12	NA	132262890	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269031_132269150_132271366_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.27	chr4	+	1425	9	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	2	136	junction_2	992.348910099165	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2361	False	NA	12	True	AATAAA	-12	NA	132262890	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269031_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.29	chr4	+	3069	6	NIC	ENSMUSG00000054405.15	novel	746	8	NA	NA	-4877	-1	intron_retention	FALSE	canonical	3	2684	junction_5	180.076206090644	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGGTCTCCTCCTCGGG	8563	False	NA	18	True	AATAAA	-18	NA	132269092	132281052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132269150_132271366_132271434_132271967_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.3	chr4	+	6038	6	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2684	junction_5	217.073628062001	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2330	False	NA	19	True	AATAAA	-19	NA	132262859	132281053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.30	chr4	+	1903	5	ISM	ENSMUSG00000054405.15	ENSMUST00000142281.8	1837	8	8241	-74	-2851	-7	3prime_fragment	FALSE	canonical	3	2684	junction_4	280.828239320763	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	NA	False	NA	12	True	AATAAA	-12	NA	132271118	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.4	chr4	+	3815	7	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	2684	junction_6	211.872341019041	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGGTCTCCTCCTCGG	2334	False	NA	17	True	AATAAA	-17	NA	132262863	132281051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.5	chr4	+	3541	7	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	8	13	intron_retention	FALSE	canonical	3	2684	junction_6	211.872341019041	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTGCCCCGACTCC	2339	False	NA	13	True	ATTAAA	-13	NA	132262868	132280782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.6	chr4	+	1027	8	FSM	ENSMUSG00000054405.15	ENSMUST00000138334.8	613	8	-82	-332	8	13	multi-exon	FALSE	canonical	3	13	junction_4	1070.81689206256	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTTGCCCCGACTCC	2339	False	NA	13	True	ATTAAA	-13	NA	132262868	132280782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.8	chr4	+	918	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	11	472	-6	50	multi-exon	FALSE	canonical	3	2684	junction_8	233.065676097962	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATCCTTTGTACATTGA	2342	False	NA	23	True	AATACA	-17	NA	132262871	132280581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.24539.9	chr4	+	1770	8	NIC	ENSMUSG00000054405.15	novel	613	8	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	13	junction_4	1336.96125140376	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	2343	False	NA	12	True	AATAAA	-12	NA	132262872	132281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132263458_132265497_132265600_132269092_132269150_132271366_132271434_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ES.2454.1	chr10	-	572	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	-22	-2	-22	2	multi-exon	FALSE	canonical	3	41	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGCCTTGGTTTTAT	NA	False	NA	-6	True	NA	NA	NA	22024744	22020198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22020414_22024387
ES.2454.2	chr10	-	4553	1	FSM	ENSMUSG00000097327.8	ENSMUST00000180697.2	209	1	-155	-4189	-29	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGCCTTGGTTTTAT	NA	False	NA	-6	True	NA	NA	NA	22024751	22020198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22020200_22024800
ES.24540.1	chr4	-	1152	2	Antisense	novelGene_ENSMUSG00000054405.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACAAACAAA	5362	False	NA	NA	False	NA	NA	NA	132268940	132267568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132267902_132268121
ES.24541.1	chr4	+	3714	2	Genic_Genomic	ENSMUSG00000056529.8	novel	3637	2	NA	NA	-7520	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGGTCTTTTGTCTTG	9408	False	NA	NA	False	AATAAA	-14	NA	132283857	132309991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_132284125_132306544
ES.24541.2	chr4	+	343	1	Intergenic	novelGene_20216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	132284485	132284828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132284500_132284800
ES.24542.1	chr4	-	175	1	Intergenic	novelGene_20217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAACAACATATTAG	566	False	NA	NA	False	NA	NA	NA	132331988	132331813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132331800_132332000
ES.24543.1	chr4	-	175	1	Intergenic	novelGene_20218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGCTTATGAG	NA	False	NA	NA	False	NA	NA	NA	132332964	132332789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132332800_132333000
ES.24544.1	chr4	-	177	1	Intergenic	novelGene_20219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATTATTGCTAT	NA	False	NA	NA	False	NA	NA	NA	132334936	132334759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132334800_132334900
ES.24545.1	chr4	+	183	1	Intergenic	novelGene_20220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACTTTTTTCTATG	2393	False	NA	NA	False	NA	NA	NA	132354165	132354348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132354200_132354300
ES.24546.1	chr4	+	183	1	Intergenic	novelGene_20221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTGGAAAAAAAAA	7258	False	NA	NA	False	NA	NA	NA	132359030	132359213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132359000_132359200
ES.24547.1	chr4	+	2522	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	10	2628	0	2	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGTTCTGTCCCAGGA	NA	False	NA	30	True	NA	NA	NA	132366366	132449448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24547.10	chr4	+	2952	1	Intergenic	novelGene_20222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132371369	132374321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132371400_132374300
ES.24547.11	chr4	+	1917	2	ISM	ENSMUSG00000028886.16	ENSMUST00000130833.2	766	5	-1117	13898	-1117	-4212	5prime_fragment	FALSE	canonical	3	84	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGATAATAGTTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	132430593	132435062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132431722_132434273
ES.24547.12	chr4	+	212	1	Intergenic	novelGene_20227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTATACACTAGC	NA	False	NA	NA	False	NA	NA	NA	132443295	132443507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132443300_132443500
ES.24547.2	chr4	+	2600	18	NNC	ENSMUSG00000028886.16	novel	5186	18	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	25.1584597478823	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTACTTCAGAAGTTC	NA	False	NA	20	True	NA	NA	NA	132366371	132449438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132439658_132439752_132446522_132446624_132448589
ES.24547.3	chr4	+	1207	1	NIC	ENSMUSG00000028886.16	novel	1138	10	NA	NA	3	-52827	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAACCGCGTTTATT	NA	False	NA	NA	False	ATTAAA	-10	NA	132366371	132367578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132366400_132367600
ES.24547.4	chr4	+	2516	17	NNC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.6353936444434	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGAAGTTCTGTCCCA	NA	False	NA	27	True	NA	NA	NA	132366375	132449445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132397499_132397567_132400206_132400344_132415443_132415530_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24547.5	chr4	+	2085	16	ISM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	24	5017	6	-1901	5prime_fragment	FALSE	canonical	3	62	junction_15	5.63165655518477	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTCCTGTAAT	NA	False	NA	NA	False	ATTAAA	-25	NA	132366380	132447059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522
ES.24547.6	chr4	+	2408	16	NIC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	-1	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.9973331555318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTGTACTTCAGAAGT	NA	False	NA	18	True	NA	NA	NA	132366388	132449436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132366467_132384003_132384100_132389205_132389250_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24547.7	chr4	+	5544	18	NNC	ENSMUSG00000028886.16	novel	5186	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.1650606360606	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAGAAGTTCTGTCCC	NA	False	NA	26	True	NA	NA	NA	132366390	132449444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132429302_132429411_132431582_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24547.8	chr4	+	2633	19	NNC	ENSMUSG00000028886.16	novel	5186	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.9806235821432	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366392	132449446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132430742_132430809_132431508_132431582_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24547.9	chr4	+	2623	18	NIC	ENSMUSG00000028886.16	novel	5186	18	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	22.5258021989425	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTACTTCAGAAGTTC	NA	False	NA	20	True	NA	NA	NA	132366393	132449438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ES.24548.1	chr4	+	1114	1	ISM	ENSMUSG00000028886.16	ENSMUST00000020197.14	4976	15	84603	0	19249	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTTTTCTCCTTTGTC	NA	False	NA	18	True	AATAAA	-14	NA	132450959	132452073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132451000_132452100
ES.24549.1	chr4	+	3320	2	Antisense	novelGene_ENSMUSG00000028885.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGACTAGCTTATCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	132464935	132470177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132467941_132469862
ES.2455.1	chr10	+	1501	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	-61	139	-61	-136	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22034406	22059677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.10	chr10	+	1168	8	Fusion	ENSMUSG00000053219.16_ENSMUSG00000078452.11	novel	1274	7	NA	NA	-34	-143	multi-exon	TRUE	non_canonical	0	0	junction_7	36.398026409829	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAAAAAGGAAAACACAT	NA	False	NA	NA	False	AATAAA	-15	NA	22049385	22249895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453_22059493_22249714
ES.2455.11	chr10	+	1168	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-30	136	-30	-136	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22049389	22059677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.12	chr10	+	1157	7	NNC	ENSMUSG00000053219.16	novel	1218	6	NA	NA	-28	-120	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	19.8046010366839	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACTGTCATGGCCAG	NA	False	NA	NA	False	AATAAA	-38	NA	22049391	22249918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22049414_22049774_22049866_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ES.2455.13	chr10	+	1155	7	NNC	ENSMUSG00000053219.16	novel	1274	7	NA	NA	-23	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.809831173034	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22049396	22059677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22049436_22049774_22049866_22050197_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.14	chr10	+	1295	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	-20	-1	-20	1	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGTGCTCCAGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	22049399	22059814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.15	chr10	+	1141	7	Fusion	ENSMUSG00000053219.16_ENSMUSG00000078452.11	novel	1274	7	NA	NA	-9	-139	multi-exon	FALSE	canonical	3	14	junction_5	20.6801031589948	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22049410	22249899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_22049436_22049774_22049866_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ES.2455.16	chr10	+	1187	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-33	-139	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22237759	22249899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ES.2455.17	chr10	+	3276	6	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	-3	562	intron_retention	FALSE	canonical	3	14	junction_5	14.1619207736804	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATAGACCATTTCTG	NA	False	NA	NA	False	NA	NA	NA	22237789	22250600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087
ES.2455.18	chr10	+	1288	7	NNC	ENSMUSG00000078452.11	novel	1271	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	16.5672032106274	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGTGCTCCAGAAGT	NA	False	NA	NA	False	AATAAA	-13	NA	22237795	22250036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22237831_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ES.2455.2	chr10	+	2742	9	NNC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	-40	1234	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	44.5980310664047	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACTCATGATATTTCA	NA	False	NA	NA	False	NA	NA	NA	22034427	22061050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057134_22057288_22057844_22058015_22059453
ES.2455.3	chr10	+	1287	7	NNC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	-14	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.3943268991366	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAAAACACATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	22034453	22059677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22034618_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057843_22058015_22059453
ES.2455.4	chr10	+	1442	2	NNC	ENSMUSG00000075297.11	novel	1029	6	NA	NA	-14	-126107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTGGATTCTTCAATC	NA	False	NA	NA	False	NA	NA	NA	22034470	22038641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22034618_22037346
ES.2455.5	chr10	+	1330	8	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	8	-140	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	37.3625371685793	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAAAAAGGAAAACACAT	NA	False	NA	NA	False	AATAAA	-15	NA	22034475	22059673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_22034618_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.6	chr10	+	1284	8	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	10	-212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43.5458941573047	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATACTCTGAATATTATT	NA	False	NA	NA	False	AATACA	-15	NA	22034477	22059601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_22034618_22047902_22048001_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.7	chr10	+	1775	10	NNC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.8718020380955	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGTGCTCCAGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	22034495	22059814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22034618_22041820_22042047_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.8	chr10	+	1525	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	55	-1	55	1	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGCTCCAGAAGTTTA	NA	False	NA	6	True	AATAAA	-16	NA	22034522	22059817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.2455.9	chr10	+	3026	7	NNC	ENSMUSG00000053219.16	novel	1274	7	NA	NA	-1517	0	intron_retention	FALSE	non_canonical	0	0	junction_1	38.4519902678074	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	2	True	AATAAA	-12	NA	22047902	22059813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_22048767_22048870_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ES.24550.1	chr4	-	4365	4	NNC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	-1	83559	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2339898266013	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCATCTTTTTTGT	4061	False	NA	NA	False	NA	NA	NA	132459840	132368648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132368827_132452248_132455882_132458186_132458384_132459483
ES.24550.10	chr4	-	2906	3	Antisense	novelGene_ENSMUSG00000028886.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTAATGCTAGTGTA	NA	False	NA	NA	False	NA	NA	NA	132449518	132443538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132443575_132444683_132446628_132448592
ES.24550.11	chr4	-	4833	1	Antisense	novelGene_ENSMUSG00000028886.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGGATTGCAGGCTTGT	NA	False	NA	NA	False	CATAAA	-13	NA	132449518	132444685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132444700_132449500
ES.24550.12	chr4	-	4219	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	27	-1	9	1	multi-exon	FALSE	canonical	3	48	junction_1	6.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTATTTTCCAGGAT	4071	False	NA	NA	False	AATAAA	-21	NA	132459830	132452206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132455882_132458186_132458384_132459483
ES.24550.13	chr4	-	3756	2	NIC	ENSMUSG00000037752.5	novel	376	3	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGTTTATTTTCCAGG	4093	False	NA	NA	False	AATAAA	-19	NA	132459808	132452208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132455882_132459725
ES.24550.14	chr4	-	4288	4	NNC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6274169979695	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATTGTTTATTTTCCA	4068	False	NA	NA	False	AATAAA	-17	NA	132459833	132452210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132455882_132458186_132458384_132458773_132458844_132459483
ES.24550.15	chr4	-	4281	3	NIC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAATTGTTTATTTTCC	4071	False	NA	NA	False	AATAAA	-16	NA	132459830	132452211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132455882_132458186_132458451_132459483
ES.24550.16	chr4	-	3953	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	22	-3599	22	-10	multi-exon	FALSE	canonical	3	5	junction_2	21.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAACTTACAATTGTTTA	4084	False	NA	NA	False	AATAAA	-10	NA	132459817	132452217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132455882_132458186_132458384_132459725
ES.24550.17	chr4	-	2918	2	ISM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	11	-1211	11	1211	intron_retention	FALSE	canonical	3	48	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACCACTAAGTGTAGTC	4073	False	NA	-4	True	ATTAAA	-26	NA	132459828	132454605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132455882_132458186
ES.24550.18	chr4	-	1595	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	-15	-1204	3	1204	multi-exon	FALSE	canonical	3	5	junction_2	21.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGTATGTACCACTAAG	4047	False	NA	-11	True	ATTAAA	-19	NA	132459854	132454612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132455882_132458186_132458384_132459725
ES.24550.19	chr4	-	1644	4	NNC	ENSMUSG00000037752.5	novel	376	3	NA	NA	10	1203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6274169979695	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGTATGTACCACTAA	4072	False	NA	-12	True	ATTAAA	-18	NA	132459829	132454613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132455882_132458186_132458384_132458773_132458849_132459725
ES.24550.20	chr4	-	1879	3	NIC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	9	1203	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGTATGTACCACTAA	4071	False	NA	-12	True	ATTAAA	-18	NA	132459830	132454613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132455882_132458186_132458451_132459483
ES.24550.21	chr4	-	2410	8	Fusion	ENSMUSG00000028885.9_ENSMUSG00000037752.5	novel	4245	3	NA	NA	70	1203	multi-exon	FALSE	canonical	0	0	junction_1	30.4483503792295	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGTATGTACCACTAA	NA	False	NA	-12	True	ATTAAA	-18	NA	132484493	132454613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_132455882_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ES.24550.22	chr4	-	1753	4	NNC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	-1	1203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.2339898266013	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAGTATGTACCACTAA	4061	False	NA	-12	True	ATTAAA	-18	NA	132459840	132454613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132455678_132455746_132455882_132458186_132458384_132459483
ES.24550.23	chr4	-	1896	8	NNC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	70	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.0781529862445	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACCGTGAGGGATCACA	NA	False	NA	-3	True	AATAAA	-29	NA	132484493	132460278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132461071_132465329_132465464_132465547_132465729_132466935_132467071_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ES.24550.24	chr4	-	1686	8	NNC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	77	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	35.2975688588738	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGTGCAACCGTGAGG	NA	False	NA	-10	True	AATAAA	-22	NA	132484486	132460285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132461071_132465329_132465464_132465635_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473934_132474003_132484295
ES.24550.25	chr4	-	1959	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	37	10	37	-10	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACAGTGCAACCGTGAG	NA	False	NA	-11	True	AATAAA	-21	NA	132484526	132460286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ES.24550.26	chr4	-	1745	7	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	107	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	32.4448249597169	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAACAGTGCAACCGTGAG	NA	False	NA	-11	True	AATAAA	-21	NA	132484456	132460286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132472398_132472497_132473788_132474003_132484295
ES.24550.27	chr4	-	1721	8	NNC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	117	-22	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	28.4346727121115	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGGTTTTGCAACAG	NA	False	NA	-23	True	AATAAA	-9	NA	132484446	132460298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473934_132474003_132484295
ES.24550.28	chr4	-	3905	1	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	20360	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGGTTTTGCAACAG	NA	False	NA	-23	True	AATAAA	-9	NA	132464203	132460298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132460300_132464200
ES.24550.29	chr4	-	1340	6	NIC	ENSMUSG00000028885.9	novel	2006	8	NA	NA	136	-4873	intron_retention	FALSE	canonical	3	69	junction_3	10.1311401135312	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGCTTACAGGTTCAG	NA	False	NA	NA	False	NA	NA	NA	132484427	132465149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ES.24550.3	chr4	-	175	1	Intergenic	novelGene_20223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGGGAAT	7909	False	NA	NA	False	NA	NA	NA	132390301	132390126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132390100_132390300
ES.24550.30	chr4	-	207	1	Intergenic	novelGene_20228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGCACTCTGAAGACC	NA	False	NA	NA	False	NA	NA	NA	132469634	132469427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132469400_132469600
ES.24550.31	chr4	-	177	1	Intergenic	novelGene_20229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTCACT	NA	False	NA	NA	False	NA	NA	NA	132474316	132474139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132474100_132474300
ES.24550.32	chr4	-	186	1	Intergenic	novelGene_20230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAGAAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	132486492	132486306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132486300_132486500
ES.24550.4	chr4	-	159	2	Intergenic	novelGene_20224	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132486492	132390140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132390246_132486438
ES.24550.5	chr4	-	173	1	Intergenic	novelGene_20225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAATAAA	7181	False	NA	NA	False	NA	NA	NA	132391029	132390856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132390900_132391000
ES.24550.6	chr4	-	5542	1	Antisense	novelGene_ENSMUSG00000028886.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGGAG	1219	False	NA	NA	False	NA	NA	NA	132396991	132391449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132391400_132397000
ES.24550.7	chr4	-	92	1	Intergenic	novelGene_20226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAACAAAAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	132399472	132399380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132399400_132399500
ES.24550.8	chr4	-	8156	1	Antisense	novelGene_ENSMUSG00000028886.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTCCCACCCAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	132426105	132417949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132417900_132426100
ES.24550.9	chr4	-	6759	4	Antisense	novelGene_ENSMUSG00000028886.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAACAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	132449518	132431177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132431720_132434271_132437367_132439148_132439274_132446521
ES.24551.1	chr4	+	1572	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	-19	260	-16	-260	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGGTTTTATTTTTA	NA	False	NA	35	True	GATAAA	-25	NA	132495626	132505803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.10	chr4	+	3916	6	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	5	-262	intron_retention	FALSE	canonical	3	1317	junction_5	66.4487772648978	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTTGGTTTTATTTT	NA	False	NA	33	True	GATAAA	-23	NA	132495650	132505801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132502445_132503558_132503667_132503963
ES.24551.11	chr4	+	3089	6	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	5	-271	intron_retention	FALSE	canonical	3	1348	junction_3	54.3161117901493	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495650	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558
ES.24551.12	chr4	+	1743	8	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	12	-271	intron_retention	FALSE	canonical	3	1317	junction_6	60.4871381167188	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495657	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.13	chr4	+	1787	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	20	6	20	-6	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTGTCGCCCCTGGC	NA	False	NA	1	True	AGTAAA	-18	NA	132495665	132506057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.14	chr4	+	5346	8	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-19	2404	intron_retention	FALSE	non_canonical	0	0	junction_7	514.033549290237	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132495667	132508467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132507383_132507570
ES.24551.15	chr4	+	3391	8	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-19	-272	intron_retention	FALSE	canonical	3	1317	junction_6	95.2543319492717	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGCTTCTGAAATGTTG	NA	False	NA	23	True	GATAAA	-13	NA	132495667	132505791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.16	chr4	+	2635	8	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-19	-271	intron_retention	FALSE	canonical	3	1317	junction_6	97.6963224925659	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495667	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.17	chr4	+	7287	6	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-19	3017	intron_retention	FALSE	non_canonical	0	0	junction_5	573.243543356574	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACAAATAGTTCAAGG	NA	False	NA	NA	False	NA	NA	NA	132495667	132509080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132502445_132503558_132507383_132507570
ES.24551.18	chr4	+	2030	7	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-19	-271	intron_retention	FALSE	canonical	3	1345	junction_6	56.3076864695714	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495667	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132504059_132505100
ES.24551.19	chr4	+	1053	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	25	735	-16	-735	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTCTCTGTTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	132495670	132505328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.20	chr4	+	2558	8	ISM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	26	271	-15	-271	intron_retention	FALSE	canonical	3	1317	junction_7	94.8749983194859	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495671	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963
ES.24551.21	chr4	+	1807	8	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	-9	-271	intron_retention	FALSE	canonical	3	1345	junction_7	90.4787718929988	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495677	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132504059_132505100
ES.24551.23	chr4	+	1689	9	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	11	-271	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	481.136528830435	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495697	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504258_132505100
ES.24551.24	chr4	+	2825	1	Intergenic	novelGene_20232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132506219	132509044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132506200_132509000
ES.24551.3	chr4	+	5282	8	ISM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	-3	-2424	0	2424	intron_retention	FALSE	canonical	3	1317	junction_7	94.8749983194859	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGGGAACCAGGACAGG	NA	False	NA	NA	False	NA	NA	NA	132495642	132508487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963
ES.24551.5	chr4	+	2794	7	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	3	-271	intron_retention	FALSE	canonical	3	1317	junction_6	61.938141184034	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495648	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963
ES.24551.6	chr4	+	861	5	FSM	ENSMUSG00000028884.15	ENSMUST00000130090.8	823	5	-38	0	3	0	multi-exon	FALSE	canonical	3	1348	junction_4	96.0676844729798	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	132495648	132501546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137
ES.24551.7	chr4	+	1746	10	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	4	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	600.384321358689	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTCTGAAATGTTGG	NA	False	NA	24	True	GATAAA	-14	NA	132495649	132505792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132499607_132499816_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.8	chr4	+	1522	9	NNC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	4	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	480.70259451661	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATAGCTTCTGAAAT	NA	False	NA	19	True	GATAAA	-9	NA	132495649	132505787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502338_132502445_132503558_132503667_132503963_132504059_132505100
ES.24551.9	chr4	+	3704	7	NIC	ENSMUSG00000028884.15	novel	1813	9	NA	NA	5	-260	intron_retention	FALSE	canonical	3	1317	junction_6	102.101937080329	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGGTTTTATTTTTA	NA	False	NA	35	True	GATAAA	-25	NA	132495650	132505803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132503667_132503963
ES.24552.1	chr4	-	374	1	Intergenic	novelGene_20231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGACACCCAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	132497481	132497107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132497100_132497500
ES.24553.1	chr4	-	169	1	Intergenic	novelGene_20233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATATGCACATAC	7864	False	NA	NA	False	NA	NA	NA	132507567	132507398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132507400_132507600
ES.24554.1	chr4	-	2224	3	ISM	ENSMUSG00000037731.6	ENSMUST00000045154.6	3079	6	10291	4	10291	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGAAATGTCTTGTCT	2024	False	NA	NA	False	AATAAA	-19	NA	132513407	132509157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132510317_132510658_132510810_132512493
ES.24555.1	chr4	+	175	1	Intergenic	novelGene_20234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTGAAAAAAA	2971	False	NA	NA	False	NA	NA	NA	132518796	132518971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132518800_132519000
ES.24556.1	chr4	-	183	1	Intergenic	novelGene_20235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCGAGACAGGGTTT	9215	False	NA	NA	False	NA	NA	NA	132526216	132526033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132526000_132526200
ES.24557.1	chr4	+	236	1	Intergenic	novelGene_20236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCATTCAGGAGGC	95	False	NA	NA	False	NA	NA	NA	132530841	132531077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132530800_132531100
ES.24557.2	chr4	+	386	1	Intergenic	novelGene_20237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAAAATAGGGAATCT	95	False	NA	NA	False	NA	NA	NA	132530841	132531227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132530800_132531200
ES.24558.1	chr4	+	202	1	Intergenic	novelGene_20238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTTAAAAGTCTT	2208	False	NA	NA	False	NA	NA	NA	132546916	132547118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132546900_132547100
ES.24559.1	chr4	+	2704	2	Antisense	novelGene_ENSMUSG00000088990.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAGGAAAAAAAAATAC	8684	False	NA	NA	False	NA	NA	NA	132562057	132570279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132562829_132568346
ES.2456.1	chr10	-	290	1	Intergenic	novelGene_1869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	22449126	22448836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_22448800_22449100
ES.24560.1	chr4	+	179	1	Intergenic	novelGene_20239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAATT	9982	False	NA	NA	False	NA	NA	NA	132578800	132578979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132578800_132579000
ES.24561.1	chr4	+	242	1	Intergenic	novelGene_20240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGGTAATTCTGTGTA	6986	False	NA	NA	False	AATAAA	-22	NA	132588483	132588725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132588500_132588700
ES.24562.1	chr4	+	449	1	Intergenic	novelGene_20241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3015	False	NA	NA	False	NA	NA	NA	132591805	132592254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132591800_132592300
ES.24563.1	chr4	+	1638	1	Genic_Genomic	ENSMUSG00000083816.4	novel	NA	NA	NA	NA	-217	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAATTTAAAAA	229	False	NA	NA	False	NA	NA	NA	132611856	132613494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_132611900_132613500
ES.24564.1	chr4	-	2102	7	FSM	ENSMUSG00000028882.14	ENSMUST00000105919.2	1090	7	4	-1016	4	118	multi-exon	FALSE	canonical	3	27	junction_1	56.674509261219	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATTATCATTAGCGA	NA	False	NA	NA	False	AATAAA	-18	NA	132570430	132554121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132555515_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
ES.24564.10	chr4	-	2311	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.6436128232381	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGGGTATGGTCTTGA	NA	False	NA	-10	True	ATTAAA	-12	NA	132570445	132554243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132560953_132561267_132561947_132562102_132567954_132568016_132570367
ES.24564.11	chr4	-	4648	8	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	28	1	intron_retention	FALSE	canonical	3	172	junction_4	25.3473824273507	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGCACTTGATTGTC	6121	False	NA	-3	True	AATAAA	-15	NA	132611792	132580810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.12	chr4	-	2926	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	8	0	8	0	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCACTTGATTGT	6101	False	NA	-4	True	AATAAA	-14	NA	132611812	132580811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.13	chr4	-	4480	8	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	60	-135	intron_retention	FALSE	canonical	3	172	junction_4	25.3473824273507	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATTGGGACAACAAAGTG	6153	False	NA	NA	False	AATAAA	-22	NA	132611760	132580946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.14	chr4	-	2651	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	-278	561	-278	-561	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	5815	False	NA	-9	True	AATAAA	-15	NA	132612098	132581372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.15	chr4	-	2343	9	NNC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	22	-561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.9509972887452	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTATTTTTATGAGTT	6115	False	NA	-9	True	AATAAA	-15	NA	132611798	132581372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598961_132611558
ES.24564.16	chr4	-	4753	8	NNC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	107	-563	intron_retention	FALSE	canonical	0	0	junction_5	81.6515743377722	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6200	False	NA	-11	True	AATAAA	-13	NA	132611713	132581374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132591356_132595478_132595579_132598898_132598969_132611558
ES.24564.17	chr4	-	2349	10	NNC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	91	-563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.0003318724996	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6184	False	NA	-11	True	AATAAA	-13	NA	132611729	132581374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132582870_132584610_132584694_132585505_132585575_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.19	chr4	-	4119	8	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	-7	-563	intron_retention	FALSE	canonical	3	172	junction_4	25.3473824273507	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6086	False	NA	-11	True	AATAAA	-13	NA	132611827	132581374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.2	chr4	-	2032	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	10	-5	10	5	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCTTGAGTCTTACTG	NA	False	NA	-1	True	ATTAAA	-21	NA	132570470	132554234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
ES.24564.20	chr4	-	3317	8	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	90	-563	intron_retention	FALSE	canonical	3	172	junction_4	26.9216550420676	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6183	False	NA	-11	True	AATAAA	-13	NA	132611730	132581374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132582870_132584610_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.21	chr4	-	2329	9	NNC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	79	-563	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	75.0179145271315	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6172	False	NA	-11	True	AATAAA	-13	NA	132611741	132581374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587998_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.22	chr4	-	4187	1	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	5009	-564	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGTTATTTTTATGA	NA	False	NA	-12	True	AATAAA	-12	NA	132585562	132581375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132581400_132585600
ES.24564.23	chr4	-	2358	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	-278	854	-278	-854	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACTGCCCTTTTT	5815	False	NA	NA	False	AATAAA	-23	NA	132612098	132581665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.25	chr4	-	3111	3	ISM	ENSMUSG00000028879.5	ENSMUST00000137109.2	662	5	2699	-2683	2699	-862	3prime_fragment	FALSE	canonical	3	218	junction_1	2.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAAATGTTGTCTACTG	NA	False	NA	NA	False	AATAAA	-15	NA	132587872	132581673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_132584694_132585729_132585803_132587854
ES.24564.26	chr4	-	1228	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	91	1615	91	-1615	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAACTTTACCTTTTTAT	6184	False	NA	NA	False	CATAAA	-19	NA	132611729	132582426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.27	chr4	-	3609	1	NIC	ENSMUSG00000028879.5	novel	2934	9	NA	NA	10154	-13701	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9733	False	NA	NA	False	NA	NA	NA	132601666	132598057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132598100_132601700
ES.24564.3	chr4	-	3170	6	NIC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	165	junction_5	10.2176318195558	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	132570447	132554239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
ES.24564.4	chr4	-	4043	16	Fusion	ENSMUSG00000028879.5_ENSMUSG00000028882.14	novel	2037	7	NA	NA	56	0	multi-exon	FALSE	canonical	0	0	junction_8	82.4826985225117	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	6149	False	NA	-6	True	ATTAAA	-16	NA	132611764	132554239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570119_132570232_132570367_132571555_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ES.24564.6	chr4	-	5872	4	NIC	ENSMUSG00000028882.14	novel	883	5	NA	NA	0	-2	intron_retention	FALSE	canonical	3	165	junction_3	3.74165738677394	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGTATGGTCTTGAGT	NA	False	NA	-8	True	ATTAAA	-14	NA	132570445	132554241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132558081_132560207_132562102_132567954_132568016_132570367
ES.24564.9	chr4	-	2067	8	NNC	ENSMUSG00000028882.14	novel	2037	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	77.7027302333341	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGGGTATGGTCTTGA	NA	False	NA	-10	True	ATTAAA	-12	NA	132570445	132554243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132564450_132564520_132567954_132568016_132570367
ES.24565.1	chr4	+	224	1	Intergenic	novelGene_20242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGGGCATGGTGGCGC	6987	False	NA	NA	False	NA	NA	NA	132618614	132618838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132618600_132618800
ES.24566.1	chr4	+	268	1	Intergenic	novelGene_20243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATTAAATTTTGGGG	1630	False	NA	NA	False	NA	NA	NA	132625956	132626224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132626000_132626200
ES.24567.1	chr4	+	157	1	Intergenic	novelGene_20245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	132638974	132639131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132639000_132639100
ES.24568.1	chr4	+	2873	3	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5576	False	NA	NA	False	TTTAAA	-22	NA	132644649	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646687_132647187_132647387_132647844
ES.24568.2	chr4	+	3831	1	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5577	False	NA	NA	False	TTTAAA	-22	NA	132644650	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132644600_132648500
ES.24568.3	chr4	+	2755	3	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5578	False	NA	NA	False	ATTAAA	-27	NA	132644651	132648457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646700_132647197_132647399_132647951
ES.24568.4	chr4	+	2408	1	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTTTCTCTGTATAT	5578	False	NA	NA	False	NA	NA	NA	132644651	132647059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132644700_132647100
ES.24568.5	chr4	+	3329	2	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646687_132647187
ES.24568.6	chr4	+	1390	2	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132644754_132647193
ES.24568.7	chr4	+	3292	2	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5578	False	NA	NA	False	ATTAAA	-27	NA	132644651	132648457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646730_132647243
ES.24568.8	chr4	+	3001	2	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646604_132647432
ES.24568.9	chr4	+	2789	3	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_132646687_132647187_132647350_132647889
ES.24569.1	chr4	-	3201	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-301	-1037	-236	-1	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTGATTCAGTT	NA	False	NA	-1	True	AATAAA	-18	NA	132650105	132626524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ES.24569.10	chr4	-	1483	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	12	1558	12	-520	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTTGGGTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	132649857	132628081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ES.24569.11	chr4	-	175	1	Intergenic	novelGene_20244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7820	False	NA	NA	False	NA	NA	NA	132631074	132630899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132630900_132631100
ES.24569.12	chr4	-	3439	1	NIC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	9513	5783	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAGAAAAAAAAAGAGAAA	187	False	NA	NA	False	NA	NA	NA	132638707	132635268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132635300_132638700
ES.24569.2	chr4	-	3300	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	-248	1	-248	-1	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTGATTCAGTT	NA	False	NA	-1	True	AATAAA	-18	NA	132650117	132626524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ES.24569.3	chr4	-	3245	10	NNC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	48.4722142629729	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTTGTGATTCAGTT	NA	False	NA	-1	True	AATAAA	-18	NA	132649933	132626524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132628620_132629313_132629416_132631208_132631345_132636936_132637066_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ES.24569.5	chr4	-	3468	10	NNC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	-227	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.7311967233935	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCATGTTGTGATTC	NA	False	NA	-5	True	AATAAA	-14	NA	132650096	132626528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132648185_132648379_132649668
ES.24569.7	chr4	-	2774	1	NIC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	18914	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCAGATGCATGTTGTG	9588	False	NA	-9	True	AATAAA	-10	NA	132629306	132626532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132626500_132629300
ES.24569.8	chr4	-	3569	9	NNC	ENSMUSG00000028878.12	novel	3053	9	NA	NA	-18	-520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	42.093460002713	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTTGGGTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	132649822	132628081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132646602_132647430_132648103_132649668
ES.24569.9	chr4	-	1396	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	-53	520	12	-520	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTTGGGTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	132649857	132628081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ES.2457.1	chr10	-	3828	1	Intergenic	novelGene_1870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCCAAAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	22489352	22485524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_22485500_22489400
ES.24570.1	chr4	+	180	1	Intergenic	novelGene_20246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	132654046	132654226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132654000_132654200
ES.24571.1	chr4	+	165	1	Intergenic	novelGene_20247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	132684884	132685049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132684900_132685000
ES.24572.1	chr4	+	179	1	Intergenic	novelGene_20248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAGAT	NA	False	NA	NA	False	NA	NA	NA	132685517	132685696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132685500_132685700
ES.24573.1	chr4	-	181	1	Intergenic	novelGene_20249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAGATTT	NA	False	NA	-5	True	NA	NA	NA	132685890	132685709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132685700_132685900
ES.24574.1	chr4	+	3360	13	NNC	ENSMUSG00000028874.15	novel	3363	13	NA	NA	-149	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.46710734378579	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	AATAAA	-21	NA	132701256	132729188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132701456_132711462_132711526_132713463_132713664_132714499_132714603_132715993_132716093_132721957_132722062_132722228_132722379_132724431_132724588_132724702_132724883_132725278_132725356_132725651_132725806_132727218_132727351_132727445
ES.24574.2	chr4	+	3251	12	NIC	ENSMUSG00000028874.15	novel	3363	13	NA	NA	-68	-33	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	3.43775825476164	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	AATAAA	-21	NA	132701337	132729188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132701582_132711462_132711526_132713463_132713664_132714499_132714603_132715993_132716093_132721957_132722062_132722228_132722379_132724431_132724588_132724702_132724883_132725278_132725356_132727218_132727351_132727445
ES.24575.1	chr4	-	171	1	Intergenic	novelGene_20250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	132705842	132705671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132705700_132705800
ES.24576.1	chr4	-	183	1	Intergenic	novelGene_20251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGCCTGATACTTACT	8162	False	NA	NA	False	NA	NA	NA	132726684	132726501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132726500_132726700
ES.24577.1	chr4	-	207	1	Intergenic	novelGene_20252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAAATTCCCGCCC	1661	False	NA	NA	False	NA	NA	NA	132733185	132732978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132733000_132733200
ES.24578.1	chr4	+	178	1	Intergenic	novelGene_20253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	1751	False	NA	NA	False	NA	NA	NA	132733585	132733763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132733600_132733800
ES.24579.1	chr4	+	5930	7	FSM	ENSMUSG00000037692.15	ENSMUST00000105915.8	6341	7	-30	441	-30	180	multi-exon	FALSE	canonical	1	4	junction_1	40.1472982348197	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGCTGTGGTCCCGTG	1159	False	NA	16	True	NA	NA	NA	132738786	132804733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132738835_132739500_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.11	chr4	+	6211	8	NNC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	13	17	intron_retention	TRUE	canonical	0	0	junction_1	38.9463262263671	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	1202	False	NA	NA	False	NA	NA	NA	132738829	132804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738893_132739135_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.12	chr4	+	6451	7	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	16	17	intron_retention	FALSE	canonical	3	15	junction_1	35.6697817954264	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	1205	False	NA	NA	False	NA	NA	NA	132738832	132804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.13	chr4	+	5720	6	NNC	ENSMUSG00000037692.15	novel	938	5	NA	NA	-4	4844	intron_retention	FALSE	non_canonical	0	0	junction_1	23.0599219426259	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	1222	False	NA	NA	False	NA	NA	NA	132738849	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738886_132739500_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686
ES.24579.14	chr4	+	5937	8	NNC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	-4	172	intron_retention	FALSE	canonical	0	0	junction_1	42.3165910435968	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGTAAACCTGCTGTG	1222	False	NA	8	True	NA	NA	NA	132738849	132804725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738889_132739135_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788339_132788376_132788686_132793589_132804297
ES.24579.15	chr4	+	6120	8	NNC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	-2	-27	intron_retention	FALSE	canonical	1	1	junction_1	38.7619632619191	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAATGAAAAAAAGC	1224	False	NA	NA	False	NA	NA	NA	132738851	132804912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738885_132739135_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.16	chr4	+	6285	8	NNC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	-2	8	intron_retention	FALSE	canonical	0	0	junction_1	40.147686542239	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTGTGTCTT	1224	False	NA	NA	False	NA	NA	NA	132738851	132804964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738893_132739135_132739270_132739503_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.17	chr4	+	6097	6	NIC	ENSMUSG00000037692.15	novel	938	5	NA	NA	0	4844	intron_retention	FALSE	canonical	3	15	junction_1	17.8033704674143	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	1226	False	NA	NA	False	NA	NA	NA	132738853	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686
ES.24579.19	chr4	+	6170	7	NIC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	6	166	intron_retention	FALSE	canonical	3	15	junction_1	35.6697817954264	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCATTCTGTAAACCT	1232	False	NA	2	True	NA	NA	NA	132738859	132804719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739270_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.2	chr4	+	6150	7	NNC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-18	17	intron_retention	FALSE	non_canonical	0	0	junction_1	40.9827199357648	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	1171	False	NA	NA	False	NA	NA	NA	132738798	132804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738835_132739508_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.20	chr4	+	5938	7	NNC	ENSMUSG00000037692.15	novel	2579	9	NA	NA	-10	4843	intron_retention	FALSE	canonical	1	1	junction_1	23.1210582226103	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAGAAAAAAAAGAAA	1238	False	NA	NA	False	NA	NA	NA	132738865	132793930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738885_132739135_132739270_132739503_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686
ES.24579.21	chr4	+	6381	4	NIC	ENSMUSG00000037692.15	novel	938	5	NA	NA	62	4844	intron_retention	FALSE	canonical	3	37	junction_1	11.1455023315337	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	1310	False	NA	NA	False	NA	NA	NA	132738937	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739599_132782323_132782515_132788091_132788376_132788686
ES.24579.23	chr4	+	5918	7	NIC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	74	172	intron_retention	FALSE	canonical	3	15	junction_1	38.0569748316039	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGTAAACCTGCTGTG	1595	False	NA	8	True	NA	NA	NA	132739222	132804725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739270_132739503_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.24	chr4	+	5998	6	NIC	ENSMUSG00000037692.15	novel	6105	6	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_3	42.7017564041574	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	1873	False	NA	NA	False	NA	NA	NA	132739500	132804956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132739599_132782323_132782515_132788091_132788204_132788339_132788376_132788686_132793589_132804297
ES.24579.25	chr4	+	5662	5	NNC	ENSMUSG00000037692.15	novel	517	2	NA	NA	-5076	4808	intron_retention	FALSE	canonical	0	0	junction_1	25.6417628099162	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132761727	132793895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132761840_132782323_132782515_132788091_132788204_132788337_132788376_132788686
ES.24579.26	chr4	+	6029	6	NNC	ENSMUSG00000037692.15	novel	517	2	NA	NA	-2100	4	intron_retention	FALSE	canonical	1	1	junction_1	41.3888873974646	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTTGTG	NA	False	NA	NA	False	NA	NA	NA	132764703	132804960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132764827_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.27	chr4	+	5803	6	NNC	ENSMUSG00000037692.15	novel	517	2	NA	NA	-2024	152	intron_retention	FALSE	canonical	1	1	junction_1	43.9972726427446	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGGATTGTATATTG	NA	False	NA	-12	True	AATGAA	-36	NA	132764779	132804705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132764827_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.28	chr4	+	5751	5	NNC	ENSMUSG00000037692.15	novel	517	2	NA	NA	-1086	4808	intron_retention	FALSE	canonical	0	0	junction_1	30.5368629692049	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132765717	132793895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132765800_132782323_132782515_132787972_132788204_132788337_132788376_132788686
ES.24579.29	chr4	+	7033	6	FSM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	-717	-418	-717	15	multi-exon	FALSE	canonical	3	23	junction_2	36.5217743271052	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTGTCTTGTAAAAC	NA	False	NA	NA	False	NA	NA	NA	132766086	132804971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.3	chr4	+	6044	7	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-18	11	intron_retention	FALSE	canonical	3	7	junction_1	37.3972666856223	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCTTGTGTCTTGTA	1171	False	NA	NA	False	NA	NA	NA	132738798	132804967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132738835_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.30	chr4	+	6261	6	FSM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	-180	-183	-180	183	multi-exon	FALSE	canonical	3	23	junction_2	36.5217743271052	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGGTCCCGTGGTG	NA	False	NA	19	True	NA	NA	NA	132766623	132804736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.31	chr4	+	6375	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-162	17	intron_retention	FALSE	canonical	3	39	junction_1	32.2204903749152	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	NA	False	NA	NA	False	NA	NA	NA	132766641	132804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.32	chr4	+	6606	5	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-147	-4983	intron_retention	FALSE	canonical	2	3	junction_2	24.3657033553312	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGCCTCTCAATGCTT	NA	False	NA	NA	False	NA	NA	NA	132766656	132794391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132787972_132788204_132788337_132788376_132788686
ES.24579.33	chr4	+	5993	5	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-113	4844	intron_retention	FALSE	canonical	3	39	junction_1	10.2072278312968	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	132766690	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686
ES.24579.34	chr4	+	5945	6	NNC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-96	620	intron_retention	FALSE	non_canonical	0	0	junction_5	22.9904327927945	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGGTGAAGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	132766707	132799994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793881_132799974
ES.24579.35	chr4	+	6058	5	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-95	4808	intron_retention	FALSE	canonical	2	3	junction_2	24.3657033553312	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132766708	132793895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132787972_132788204_132788337_132788376_132788686
ES.24579.36	chr4	+	6221	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-90	1	intron_retention	FALSE	canonical	0	0	junction_5	23.9716499223562	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATGCTTCACACCTTT	NA	False	NA	12	True	ATTAAA	-18	NA	132766713	132799375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132798886
ES.24579.37	chr4	+	6092	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-60	7	intron_retention	FALSE	canonical	0	0	junction_5	22.9904327927945	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCACACCTTTTGATTG	NA	False	NA	18	True	ATTAAA	-24	NA	132766743	132799381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132798886
ES.24579.38	chr4	+	6032	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-58	181	intron_retention	FALSE	canonical	3	39	junction_1	32.2204903749152	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGTGGTCCCGTGG	NA	False	NA	17	True	NA	NA	NA	132766745	132804734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.39	chr4	+	6369	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-42	12	intron_retention	FALSE	canonical	2	3	junction_2	41.4854191252782	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGTCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	132766761	132804968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132767098_132782323_132782515_132787972_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.4	chr4	+	5842	6	ISM	ENSMUSG00000037692.15	ENSMUST00000105915.8	6341	7	-15	11223	-15	4864	5prime_fragment	FALSE	canonical	1	4	junction_1	22.745549015137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGCAGTCTTGAAAAGG	1174	False	NA	NA	False	NA	NA	NA	132738801	132793951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132738835_132739500_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686
ES.24579.40	chr4	+	6020	5	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	-35	10622	-35	4844	5prime_fragment	FALSE	canonical	3	23	junction_2	16.768646337734	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	132766768	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686
ES.24579.41	chr4	+	5246	1	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-4874	4844	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	132788685	132793931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132788700_132793900
ES.24579.42	chr4	+	4251	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	23411	-621	-3345	0	3prime_fragment	FALSE	canonical	3	130	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTGTACCAATGTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	132790214	132805174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132793589_132804297
ES.24579.43	chr4	+	2680	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	24361	0	-2395	0	3prime_fragment	FALSE	canonical	3	130	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGCGAGAGAGCGAGC	NA	False	NA	NA	False	AAAAAG	-12	NA	132791164	132804553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132793589_132804297
ES.24579.44	chr4	+	3341	1	Genic_Genomic	ENSMUSG00000037692.15	novel	NA	NA	NA	NA	2480	6	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCACACCTTTTGATT	750	False	NA	17	True	ATTAAA	-23	NA	132796039	132799380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_132796000_132799400
ES.24579.45	chr4	+	8043	1	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	3362	8	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTGTGTCTT	1632	False	NA	NA	False	NA	NA	NA	132796921	132804964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132796900_132805000
ES.24579.46	chr4	+	6074	1	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	5093	173	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAAACCTGCTGTGG	3363	False	NA	9	True	NA	NA	NA	132798652	132804726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132798700_132804700
ES.24579.5	chr4	+	6155	7	FSM	ENSMUSG00000037692.15	ENSMUST00000105915.8	6341	7	-15	201	-15	17	multi-exon	FALSE	canonical	1	4	junction_1	40.1472982348197	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	1174	False	NA	NA	False	NA	NA	NA	132738801	132804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132738835_132739500_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.6	chr4	+	6125	8	NNC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	-15	-27	intron_retention	FALSE	canonical	0	0	junction_2	44.0217942313457	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAATGAAAAAAAGC	1174	False	NA	NA	False	NA	NA	NA	132738801	132804912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132738835_132739500_132739599_132764231_132764368_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ES.24579.8	chr4	+	6926	6	NIC	ENSMUSG00000037692.15	novel	6602	7	NA	NA	-13	-4348	intron_retention	FALSE	canonical	2	3	junction_3	25.796123739818	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAAACAAAAAGAACT	1176	False	NA	NA	False	NA	NA	NA	132738803	132795026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132738835_132739503_132739599_132782323_132782515_132787972_132788204_132788337_132788376_132788686
ES.24579.9	chr4	+	6090	7	NIC	ENSMUSG00000037692.15	novel	6602	7	NA	NA	0	-27	intron_retention	FALSE	canonical	2	3	junction_3	42.7070121746873	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAATGAAAAAAAGC	1189	False	NA	NA	False	NA	NA	NA	132738816	132804912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132738835_132739503_132739599_132782323_132782515_132787972_132788204_132788337_132788376_132788686_132793589_132804297
ES.2458.1	chr10	+	3771	5	FSM	ENSMUSG00000037490.6	ENSMUST00000042261.5	4167	5	-14	410	-14	-410	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATGTATATATTCACA	NA	False	NA	NA	False	AATAAA	-19	NA	22520895	22579774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22521213_22540261_22541606_22568033_22568157_22569892_22570026_22577920
ES.2458.2	chr10	+	2530	5	FSM	ENSMUSG00000037490.6	ENSMUST00000042261.5	4167	5	21	1616	21	-1616	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTTTGTAAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	22520930	22578568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_22521213_22540261_22541606_22568033_22568157_22569892_22570026_22577920
ES.2458.3	chr10	+	178	1	Intergenic	novelGene_1871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGATCTGGCC	NA	False	NA	NA	False	NA	NA	NA	22545630	22545808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_22545600_22545800
ES.24580.1	chr4	-	574	1	Intergenic	novelGene_20254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	AGTAAA	-37	NA	132767753	132767179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132767200_132767800
ES.24581.1	chr4	-	6346	1	Antisense	novelGene_ENSMUSG00000037692.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGAGCCATTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	132801893	132795547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132795500_132801900
ES.24582.1	chr4	+	3403	3	Intergenic	novelGene_20255	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGGTGTAACTCAGT	NA	False	NA	NA	False	NA	NA	NA	132811942	132816484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132812070_132812736_132815709_132816180
ES.24582.2	chr4	+	5940	2	Intergenic	novelGene_20256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCCTCCATTGACAAA	NA	False	NA	NA	False	AATAAA	-18	NA	132813898	132820310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132815709_132816180
ES.24583.1	chr4	-	159	1	Intergenic	novelGene_20257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTAATTAATTAATT	4092	False	NA	NA	False	NA	NA	NA	132839055	132838896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132838900_132839100
ES.24584.1	chr4	+	5539	9	NNC	ENSMUSG00000028868.14	novel	2236	8	NA	NA	-14278	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.453360138462	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132843537	132927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132843659_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.10	chr4	+	4511	3	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTTGGTGTCTGTGTGT	NA	False	NA	42	True	GATAAA	-20	NA	132857840	132927065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132857885_132921789_132922219_132923027
ES.24584.11	chr4	+	1744	6	NIC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	-7	1898	intron_retention	FALSE	canonical	3	446	junction_4	33.0611554547024	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTGTGTCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132857843	132919758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132858040_132903751_132903924_132912279_132913064_132916388_132916507_132917439_132917571_132919415
ES.24584.12	chr4	+	5289	7	NIC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	178.782689318625	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGTCACCTTTGGTGT	NA	False	NA	34	True	GATAAA	-12	NA	132857851	132927057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132858040_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.13	chr4	+	5724	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	198.353655977162	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132857852	132927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132882432_132882552_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.14	chr4	+	5686	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	198.764020392196	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTGGTGTCTGTGTG	NA	False	NA	41	True	GATAAA	-19	NA	132857853	132927064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132891901_132891987_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.16	chr4	+	5746	10	NIC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	198.567089138379	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTGGTGTCTGTGTG	NA	False	NA	41	True	GATAAA	-19	NA	132857853	132927064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132858040_132887696_132887842_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.17	chr4	+	5168	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	38	436	3	-436	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTCTTGGTGTTTCCCA	NA	False	NA	NA	False	AATATA	-21	NA	132857853	132926631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.18	chr4	+	4544	2	NNC	ENSMUSG00000028868.14	novel	483	3	NA	NA	4	-33587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAGGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	132857854	132870284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132860220_132868105
ES.24584.2	chr4	+	1809	10	NNC	ENSMUSG00000028868.14	novel	2236	8	NA	NA	-13329	-513	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	198.353655977162	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTATCCGAGTGCTT	NA	False	NA	25	True	AAGAAA	-34	NA	132844486	132923302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132844547_132853128_132853225_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.20	chr4	+	1242	7	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	43	7301	8	1906	5prime_fragment	FALSE	canonical	3	442	junction_3	34.6362045649731	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	132857858	132919766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415
ES.24584.21	chr4	+	6033	11	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	11	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	215.919637828522	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATAAAGTCTTTGTAG	NA	False	NA	13	True	TTTAAA	-18	NA	132857861	132927036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132904132_132904359_132908669_132908912_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.22	chr4	+	5822	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.243675686412	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132857861	132927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132904132_132904359_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.23	chr4	+	5245	8	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	11	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	169.704785688896	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAAGTCTTTGTAGTCA	NA	False	NA	16	True	TTTAAA	-21	NA	132857861	132927039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917575_132921877_132922219_132923027
ES.24584.24	chr4	+	3699	8	NIC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	13	-488	intron_retention	FALSE	canonical	3	420	junction_7	39.4311593353608	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCATATGCTTCTTC	NA	False	NA	50	True	NA	NA	NA	132857863	132923327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132919572_132921706_132922219_132923027
ES.24584.25	chr4	+	5900	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	14	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	194.606218417895	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTAGTCACTCAGTC	NA	False	NA	23	True	GATAAA	-1	NA	132857864	132927046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132904030_132904359_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.26	chr4	+	5737	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	199.381698579371	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGGTGTCTGTGTGTG	NA	False	NA	43	True	GATAAA	-21	NA	132857864	132927066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132882432_132882578_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.27	chr4	+	3355	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	49	2238	14	1014	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTCTGCTGCCTGCA	NA	False	NA	NA	False	CATAAA	-26	NA	132857864	132924829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.28	chr4	+	2608	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	51	2983	16	269	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCACCTGTGTTTCCTGG	NA	False	NA	NA	False	NA	NA	NA	132857866	132924084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.29	chr4	+	4457	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	22	-1354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.243675686412	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGTGTGTTTGTGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	132857872	132925713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132904132_132904359_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.3	chr4	+	5465	9	NNC	ENSMUSG00000028868.14	novel	2236	8	NA	NA	-13321	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.453360138462	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCTTTGGTGTCTGTG	NA	False	NA	39	True	GATAAA	-17	NA	132844494	132927062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132844547_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.30	chr4	+	3174	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	60	2408	25	844	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGGTTTCTTCTCTACT	NA	False	NA	NA	False	NA	NA	NA	132857875	132924659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.31	chr4	+	5280	8	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	172.59590649484	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCTTTGGTGTCTGTG	NA	False	NA	39	True	GATAAA	-17	NA	132857878	132927062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916466_132919537_132919572_132921706_132922219_132923027
ES.24584.32	chr4	+	4371	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	-21	-1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	196.243675686412	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGTGTGTTTGTGGAAT	NA	False	NA	NA	False	AATAAA	-13	NA	132857918	132925714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858040_132903751_132903924_132910235_132910421_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.34	chr4	+	5662	10	NNC	ENSMUSG00000028868.14	novel	5642	9	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.604703119294	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTGGTGTCTGTGTG	NA	False	NA	41	True	GATAAA	-19	NA	132857961	132927064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132858045_132868009_132868174_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.35	chr4	+	4197	2	Intergenic	novelGene_20264	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGAGTGAAGTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	132880956	132885301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132881824_132881971
ES.24584.4	chr4	+	3313	3	NNC	ENSMUSG00000028868.14	novel	2236	8	NA	NA	-13320	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTTGTAGTCACTC	NA	False	NA	19	True	TTTAAA	-24	NA	132844495	132927042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132844547_132903751_132903818_132923846
ES.24584.5	chr4	+	5553	10	NNC	ENSMUSG00000028868.14	novel	2236	8	NA	NA	-13308	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	198.353655977162	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132844507	132927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132844547_132853128_132853225_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.6	chr4	+	172	1	Intergenic	novelGene_20259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGGAC	NA	False	NA	NA	False	NA	NA	NA	132851205	132851377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_132851200_132851400
ES.24584.7	chr4	+	5744	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	-101	-1	-101	1	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTGTCTGTGTGTGTG	NA	False	NA	45	True	GATAAA	-23	NA	132857714	132927068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.8	chr4	+	1919	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	-10	3733	-10	-481	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCTTCTTCCTCGTGT	NA	False	NA	57	True	NA	NA	NA	132857805	132923334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24584.9	chr4	+	4289	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	25	1328	-10	-1328	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCGTAGAATACCAAGTTT	NA	False	NA	NA	False	AATAAA	-38	NA	132857840	132925739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ES.24585.1	chr4	-	2149	1	Intergenic	novelGene_20258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	9334	False	NA	NA	False	NA	NA	NA	132844075	132841926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132841900_132844100
ES.24586.1	chr4	-	155	1	Intergenic	novelGene_20260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAGAAAAAAATAAAA	779	False	NA	NA	False	NA	NA	NA	132852630	132852475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132852500_132852600
ES.24587.1	chr4	-	4135	8	Antisense	novelGene_ENSMUSG00000099202.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAGCCACACCCCGCCAA	NA	False	NA	NA	False	NA	NA	NA	132925734	132857854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132858038_132903749_132903924_132912909_132913061_132916385_132916506_132917438_132917570_132919414_132919567_132921701_132922217_132923025
ES.24587.2	chr4	-	166	1	Intergenic	novelGene_20261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATCTTTAAGGGCT	NA	False	NA	NA	False	NA	NA	NA	132861162	132860996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132861000_132861200
ES.24587.3	chr4	-	6821	1	Intergenic	novelGene_20262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACACACCACCACCATCA	9620	False	NA	NA	False	NA	NA	NA	132872819	132865998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132866000_132872800
ES.24587.4	chr4	-	157	1	Intergenic	novelGene_20263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	9798	False	NA	NA	False	NA	NA	NA	132874721	132874564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132874600_132874700
ES.24587.5	chr4	-	212	1	Intergenic	novelGene_20265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	AAGAAA	-34	NA	132889196	132888984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132889000_132889200
ES.24587.6	chr4	-	165	1	Intergenic	novelGene_20266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTACAC	7687	False	NA	NA	False	NA	NA	NA	132914942	132914777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_132914800_132914900
ES.24588.1	chr4	-	2124	2	FSM	ENSMUSG00000049649.9	ENSMUST00000052090.9	1116	2	20	-1028	20	1	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTGTGTCTGTGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	132939827	132936649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132938676_132939729
ES.24589.1	chr4	+	929	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	54	3	54	-3	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTGACCTATGTCTT	NA	False	NA	17	True	AATAAA	-19	NA	132948174	132951863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ES.24589.2	chr4	+	3733	2	NIC	ENSMUSG00000028865.15	novel	828	4	NA	NA	64	443	intron_retention	FALSE	canonical	3	46	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	132948184	132952309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132949088_132949479
ES.24589.3	chr4	+	1280	5	NIC	ENSMUSG00000028865.15	novel	986	6	NA	NA	76	-5	intron_retention	FALSE	canonical	3	38	junction_4	6.80073525436772	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTCCTGACCTATGTC	NA	False	NA	15	True	AATAAA	-17	NA	132948196	132951861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ES.24589.4	chr4	+	1785	4	FSM	ENSMUSG00000028865.15	ENSMUST00000134713.2	828	4	-648	-309	76	-4	multi-exon	FALSE	canonical	3	45	junction_3	5.43650214343336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTCCTGACCTATGTCT	NA	False	NA	16	True	AATAAA	-18	NA	132948196	132951862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132948916_132949015_132949088_132949479_132949525_132950913
ES.2459.1	chr10	-	2967	1	Genic_Genomic	ENSMUSG00000071359.14	novel	NA	NA	NA	NA	-141	319	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACATTGATAACCTGCC	NA	False	NA	NA	False	TTTAAA	-37	NA	22582425	22579458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_22579500_22582400
ES.2459.10	chr10	-	4044	7	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	49	-6	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	98.589496848746	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCAAGTTTTAAGTATT	NA	False	NA	-13	True	AATAAA	-15	NA	22607211	22579783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22581795_22582175_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ES.2459.11	chr10	-	1259	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	127	1487	41	15	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCATTCTGTAACTTTT	NA	False	NA	0	True	AATAAA	-23	NA	22607219	22581264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ES.2459.12	chr10	-	6972	4	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	-7888	6	intron_retention	FALSE	canonical	3	232	junction_1	22.0454076850486	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTCATATCCATTCT	NA	False	NA	-9	True	AATAAA	-14	NA	22590172	22581273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22581795_22583487_22583583_22583669_22585109_22585255
ES.2459.13	chr10	-	2717	5	ISM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	20647	-4	-4906	4	3prime_fragment	FALSE	canonical	3	232	junction_1	20.6215906273013	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCTTCATATCCATT	NA	False	NA	-11	True	AATAAA	-12	NA	22587190	22581275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255
ES.2459.14	chr10	-	2892	6	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_4	129.550916631261	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	False	NA	-15	True	AATAAA	-8	NA	22607277	22581279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_22583583_22583669_22583774_22585044_22585109_22585255_22585335_22587806_22587886_22607014
ES.2459.15	chr10	-	1064	6	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	107.001682229767	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	False	NA	-15	True	AATAAA	-8	NA	22607217	22581279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22607014
ES.2459.16	chr10	-	2552	7	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	98.589496848746	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	False	NA	-15	True	AATAAA	-8	NA	22607215	22581279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22581795_22582175_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ES.2459.17	chr10	-	5487	1	FSM	ENSMUSG00000098714.3	ENSMUST00000183950.3	61	1	-1910	-3516	-1910	3516	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGCTAACTTAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	22607241	22601754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22601800_22607200
ES.2459.2	chr10	-	2792	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	83	-2	-3	2	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTATTCCCCCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	22607263	22579775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ES.2459.3	chr10	-	5014	2	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	-2592	2	intron_retention	FALSE	canonical	3	286	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTATTCCCCCTTT	NA	False	NA	-5	True	AATAAA	-23	NA	22584876	22579775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22583583_22583669
ES.2459.4	chr10	-	2651	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	98.0284822555839	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607216	22579777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587899_22607014
ES.2459.5	chr10	-	2630	8	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.3948934007211	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607216	22579777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_22581479_22581591_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ES.2459.6	chr10	-	6043	4	NIC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	-5463	0	intron_retention	FALSE	canonical	3	232	junction_1	22.0454076850486	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22587747	22579777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_22581795_22583487_22583583_22583669_22585109_22585255
ES.2459.7	chr10	-	2637	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTAAGTATTCCCCC	NA	False	NA	-8	True	AATAAA	-20	NA	22607216	22579778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
ES.24590.2	chr4	+	4370	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	-37	1	-37	0	multi-exon	TRUE	canonical	2	4	junction_2	5.06727697273075	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTCTTGGCAACTTC	8412	False	NA	17	True	ATTAAA	-17	NA	132968091	132980239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ES.24590.4	chr4	+	4372	29	NNC	ENSMUSG00000028862.7	novel	4334	29	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.30306034093445	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTCTTGGCAACTTC	8434	False	NA	17	True	ATTAAA	-17	NA	132968113	132980239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132968743_132970128_132970269_132970339_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ES.24590.5	chr4	+	4516	25	NIC	ENSMUSG00000028862.7	novel	4334	29	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_8	5.41794856626257	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	8434	False	NA	18	True	ATTAAA	-18	NA	132968113	132980240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132974185_132974294_132974390_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979283_132979365_132979440_132979710_132979788_132979962
ES.24590.7	chr4	+	4409	28	NIC	ENSMUSG00000028862.7	novel	4334	29	NA	NA	-5	-1	intron_retention	FALSE	canonical	2	4	junction_2	5.15626857564098	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTGTCTTGGCAACTT	8444	False	NA	16	True	ATTAAA	-16	NA	132968123	132980238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ES.24590.8	chr4	+	3832	29	NNC	ENSMUSG00000028862.7	novel	1062	7	NA	NA	725	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.58914308352929	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	9174	False	NA	18	True	ATTAAA	-18	NA	132968853	132980240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_132968966_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ES.24591.1	chr4	-	1522	1	Antisense	novelGene_ENSMUSG00000028862.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATATGTTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	132968744	132967222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_132967200_132968700
ES.24592.1	chr4	-	1938	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	4	9	4	-1	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACTGACTGCTTAAC	NA	False	NA	-5	True	AATAAA	-11	NA	132990420	132980409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
ES.24593.1	chr4	-	2573	1	Genic_Genomic	ENSMUSG00000028857.17	novel	NA	NA	NA	NA	3279	1780	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132994148	132991575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_132991600_132994100
ES.24593.10	chr4	-	2802	4	NIC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	666	junction_2	42.9055810925442	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133005070	132993358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132994233_132995506_132997121_132998273_132998359_133004841
ES.24593.11	chr4	-	3588	5	NNC	ENSMUSG00000028857.17	novel	613	7	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	11	junction_3	328.433402686146	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133004938	132993358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132994233_132995506_132995638_132995719_132998121_132998273_132998359_133004841
ES.24593.12	chr4	-	2603	5	NIC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	9	-3	intron_retention	FALSE	canonical	3	744	junction_4	28.4341344162259	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133005072	132993358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132998359_133004841
ES.24593.2	chr4	-	1483	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	1	0	-1	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGTCTGTCATTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	133005103	132993356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ES.24593.4	chr4	-	1397	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	-22	-829	0	-2	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTCTGTCATTTTC	NA	False	NA	-14	True	AATAAA	-12	NA	133005103	132993357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
ES.24593.5	chr4	-	2872	6	NNC	ENSMUSG00000028857.17	novel	613	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	11	junction_4	366.496602985621	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTCTGTCATTTTC	NA	False	NA	-14	True	AATAAA	-12	NA	133005079	132993357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_132995638_132995719_132995817_132997088_132997121_132997980_132998121_132998273_132998359_133004841
ES.24593.6	chr4	-	2721	5	NIC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	666	junction_3	47.8611272328599	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTCTGTCATTTTC	NA	False	NA	-14	True	AATAAA	-12	NA	133005070	132993357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132994233_132995506_132995638_132995719_132997121_132998273_132998359_133004841
ES.24593.8	chr4	-	1582	5	NIC	ENSMUSG00000028857.17	novel	1484	6	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	666	junction_3	55.0062496449267	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTCTGTCATTTTC	NA	False	NA	-14	True	AATAAA	-12	NA	133005121	132993357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_132994233_132995506_132995817_132997088_132997121_132998273_132998359_133004841
ES.24593.9	chr4	-	1593	7	FSM	ENSMUSG00000028857.17	ENSMUST00000134781.8	613	7	-141	-839	-8	-3	multi-exon	FALSE	canonical	3	22	junction_5	347.535609686259	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGTCTGTCATTTT	NA	False	NA	-15	True	AATAAA	-11	NA	133005070	132993358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132997980_132998126_132998273_132998359_133004841
ES.24594.1	chr4	+	2689	2	Intergenic	novelGene_20267	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGACAAACAA	NA	False	NA	NA	False	NA	NA	NA	133005217	133008095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133007736_133007924
ES.24595.1	chr4	+	2173	2	Antisense	novelGene_ENSMUSG00000037622.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	8157	False	NA	NA	False	NA	NA	NA	133076428	133079235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_133078164_133078797
ES.24595.2	chr4	+	2807	1	Intergenic	novelGene_20271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	8157	False	NA	NA	False	NA	NA	NA	133076428	133079235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133076400_133079200
ES.24596.1	chr4	-	3396	1	Intergenic	novelGene_20268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTCTTGGCTACCTT	NA	False	NA	NA	False	NA	NA	NA	133019503	133016107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133016100_133019500
ES.24596.12	chr4	-	9274	12	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-15	-7	intron_retention	FALSE	canonical	3	469	junction_1	28.1031159120647	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8975	False	NA	-6	True	ATTAAA	-15	NA	133080204	133019776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133028046_133029029_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.15	chr4	-	3821	17	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-56	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	156.362759313079	774	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGGTGGCATTTG	8934	False	NA	-6	True	ATTAAA	-15	NA	133080245	133019776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133020535_133020714_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.2	chr4	-	3555	1	Genic_Genomic	ENSMUSG00000037622.15	novel	NA	NA	NA	NA	29766	3549	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTCTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	133019775	133016220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133016200_133019800
ES.24596.21	chr4	-	3502	14	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	31	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	138.045228845841	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTGGTGGCATTT	9021	False	NA	-7	True	ATTAAA	-14	NA	133080158	133019777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133022702_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.26	chr4	-	1402	3	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	235.5	774	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTGGTGGCATTT	8975	False	NA	-7	True	ATTAAA	-14	NA	133080204	133019777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133020939_133051152_133051286_133080096
ES.24596.27	chr4	-	3906	8	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	17998	-8	intron_retention	FALSE	canonical	3	428	junction_5	34.4122664413818	670	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTGGTGGCATTT	NA	False	NA	-7	True	ATTAAA	-14	NA	133031543	133019777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133022702_133023726_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461
ES.24596.3	chr4	-	4285	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-15	315	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCGTGTTCACCCTTCC	8975	False	NA	NA	False	NA	NA	NA	133080204	133019454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.31	chr4	-	4093	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.233511777209	766	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTGGTGGCATTT	4345	False	NA	-7	True	ATTAAA	-14	NA	133066554	133019777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024739_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066306
ES.24596.35	chr4	-	3496	14	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-229	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.27346091441	766	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGACTGGTGGCATT	4035	False	NA	-8	True	ATTAAA	-13	NA	133066864	133019778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133021697_133022508_133022702_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066807
ES.24596.36	chr4	-	3949	16	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	129.859513834502	774	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGACTGGTGGCATT	8980	False	NA	-8	True	ATTAAA	-13	NA	133080199	133019778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028039_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.39	chr4	-	5814	14	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-17	-9	intron_retention	FALSE	canonical	3	428	junction_4	34.8986698853024	774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGACTGGTGGCATT	8973	False	NA	-8	True	ATTAAA	-13	NA	133080206	133019778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.4	chr4	-	1962	1	Genic_Genomic	ENSMUSG00000037622.15	novel	NA	NA	NA	NA	28017	207	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAGTTTTCAGATTCTT	NA	False	NA	NA	False	AATGAA	-13	NA	133021524	133019562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133019600_133021500
ES.24596.46	chr4	-	2395	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-10	-1547	combination_of_known_junctions	FALSE	canonical	3	428	junction_6	32.7350305059003	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTCGGGCTGATTGTC	8980	False	NA	NA	False	NA	NA	NA	133080199	133021339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096
ES.24596.47	chr4	-	179	1	Intergenic	novelGene_20269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	133033632	133033453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133033500_133033600
ES.24596.48	chr4	-	2088	1	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	13075	1724	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTACTATGCCTCCTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	133036466	133034378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133034400_133036500
ES.24596.49	chr4	-	162	1	Intergenic	novelGene_20270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAATCTAAA	3948	False	NA	NA	False	NA	NA	NA	133052228	133052066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133052100_133052200
ES.24596.50	chr4	-	151	1	Intergenic	novelGene_20272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATCATGTTTGAGCTG	NA	False	NA	NA	False	AATAAA	-8	NA	133076835	133076684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133076700_133076800
ES.24596.8	chr4	-	4281	17	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	-66	-3	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	112.020575676971	775	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTGGCATTTGTTGG	8321	False	NA	-2	True	ATTAAA	-19	NA	133080858	133019772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
ES.24597.1	chr4	+	207	1	Intergenic	novelGene_20273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGCCCTTAAGTTCTG	4684	False	NA	NA	False	AAAAAG	-11	NA	133082209	133082416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133082200_133082400
ES.24598.1	chr4	+	4655	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	22	-1	22	1	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGGCTGCTTCCTGGGC	179	False	NA	23	True	AATAAA	-24	NA	133097038	133151014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.10	chr4	+	3578	13	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	99	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.315900802915	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGGGCTGCTTCCTGG	1194	False	NA	21	True	AATAAA	-22	NA	133098053	133151012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297_133150183_133150242
ES.24598.11	chr4	+	177	1	Intergenic	novelGene_20274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	7663	False	NA	NA	False	NA	NA	NA	133104522	133104699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133104500_133104700
ES.24598.12	chr4	+	3750	14	NNC	ENSMUSG00000028854.10	novel	760	6	NA	NA	9410	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.6993759353882	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGAGTCCAGGGCTGC	2833	False	NA	14	True	AATAAA	-15	NA	133107364	133151005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133107404_133112206_133112356_133113882_133113979_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.13	chr4	+	4808	3	Intergenic	novelGene_20276	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	6476	False	NA	NA	False	NA	NA	NA	133111007	133201132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133115476_133115549_133115874_133201116
ES.24598.14	chr4	+	2917	2	Intergenic	novelGene_20277	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATAGGGACTCCTGTG	8444	False	NA	NA	False	NA	NA	NA	133112975	133119968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133115835_133119910
ES.24598.15	chr4	+	1636	1	Intergenic	novelGene_20278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATAGGGACTCCTGTG	1137	False	NA	NA	False	NA	NA	NA	133118332	133119968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133118300_133120000
ES.24598.16	chr4	+	4643	9	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	-1913	-7	intron_retention	FALSE	canonical	3	45	junction_3	11.2888219048756	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGAGTCCAGGGCTGCT	8840	False	NA	15	True	AATAAA	-16	NA	133141703	133151006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.17	chr4	+	4000	7	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	1481	-8	intron_retention	FALSE	canonical	3	45	junction_1	12.5432584814845	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGAGTCCAGGGCTGC	NA	False	NA	14	True	AATAAA	-15	NA	133145097	133151005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.18	chr4	+	178	1	Intergenic	novelGene_20279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	133172148	133172326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133172100_133172300
ES.24598.19	chr4	+	158	1	Intergenic	novelGene_20280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1348	False	NA	NA	False	NA	NA	NA	133187041	133187199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133187000_133187200
ES.24598.2	chr4	+	4181	11	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	27	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.9037684873996	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGAGTCCAGGGCTGCT	184	False	NA	15	True	AATAAA	-16	NA	133097043	133151006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133098219_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.3	chr4	+	4318	13	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.315900802915	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCCAGGGCTGCTTCC	188	False	NA	18	True	AATAAA	-19	NA	133097047	133151009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297_133149544_133149866
ES.24598.4	chr4	+	4131	11	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.2489175016123	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTGCTTCCTGGG	188	False	NA	22	True	AATAAA	-23	NA	133097047	133151013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133139147_133139609_133142811_133142863_133145306_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.5	chr4	+	5366	11	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	33	-6	intron_retention	FALSE	canonical	3	41	junction_2	11.438531374263	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTCCAGGGCTGCTT	190	False	NA	16	True	AATAAA	-17	NA	133097049	133151007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133098219_133139147_133139609_133142611_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.6	chr4	+	4449	12	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	66	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.9967374319342	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGAGTCCAGGGCTGC	223	False	NA	14	True	AATAAA	-15	NA	133097082	133151005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147434_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.7	chr4	+	5009	13	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	71	-7	intron_retention	FALSE	canonical	0	0	junction_1	25.6584131751491	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGAGTCCAGGGCTGCT	228	False	NA	15	True	AATAAA	-16	NA	133097087	133151006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133112206_133112356_133113882_133113979_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133148199_133148812_133148886_133149297
ES.24598.8	chr4	+	4392	12	NNC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	82	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	18.5485737127376	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCAGGGCTGCTTCCTG	239	False	NA	20	True	AATAAA	-21	NA	133097098	133151011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133098219_133139147_133139609_133142811_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ES.24598.9	chr4	+	3969	11	NIC	ENSMUSG00000028854.10	novel	4676	12	NA	NA	-73	-8	intron_retention	FALSE	canonical	3	38	junction_3	12.1967208707915	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGAGTCCAGGGCTGC	1022	False	NA	14	True	AATAAA	-15	NA	133097881	133151005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133148199_133148812_133148886_133149297
ES.24599.1	chr4	-	179	1	Intergenic	novelGene_20275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTCACGTCATTA	NA	False	NA	NA	False	NA	NA	NA	133109348	133109169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133109200_133109300
ES.246.1	chr1	+	178	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAGA	2467	False	NA	NA	False	NA	NA	NA	34680661	34680839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34680700_34680800
ES.2460.1	chr10	+	1162	1	Antisense	novelGene_ENSMUSG00000071359.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAACCGATAACCAGAA	NA	False	NA	NA	False	NA	NA	NA	22607407	22608569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_22607400_22608600
ES.24600.1	chr4	+	2304	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	-16	-1	-16	1	multi-exon	TRUE	canonical	3	34	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGTATCTTTCTCCTG	NA	False	NA	14	True	AATAAA	-18	NA	133207426	133215250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133207875_133213394
ES.24601.1	chr4	-	1651	2	FSM	ENSMUSG00000056596.9	ENSMUST00000125541.2	1654	2	3	0	3	0	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACGTGTGGTTTTAAGG	NA	False	NA	-4	True	AATAAA	-18	NA	133225858	133218410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133219142_133224938
ES.24601.2	chr4	-	2909	1	Genic_Genomic	ENSMUSG00000056596.9	novel	NA	NA	NA	NA	-4	-4528	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGCCAGGGCACACAG	NA	False	NA	NA	False	NA	NA	NA	133225865	133222956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133223000_133225900
ES.24602.1	chr4	+	602	3	Intergenic	novelGene_20281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	4	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATTTTGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	133238399	133239722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133238502_133238583_133238667_133239305
ES.24602.2	chr4	+	645	3	Intergenic	novelGene_20282	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	3	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTAGAATTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	133238400	133239713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133238502_133238583_133238667_133239252
ES.24602.3	chr4	+	3494	1	Intergenic	novelGene_20283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACTTATTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	133238400	133241894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133238400_133241900
ES.24602.4	chr4	+	185	1	Intergenic	novelGene_20284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATTAATTAA	NA	False	NA	NA	False	NA	NA	NA	133239984	133240169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133240000_133240200
ES.24603.1	chr4	+	2317	3	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	24	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCTGCCTGGTCATCA	5471	False	NA	6	True	NA	NA	NA	133246273	133258098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133246364_133255050_133256321_133257141
ES.24603.2	chr4	+	1927	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCTGCCTGGTCATCA	5480	False	NA	6	True	NA	NA	NA	133246282	133258098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
ES.24603.3	chr4	+	1677	4	FSM	ENSMUSG00000037600.17	ENSMUST00000042919.16	1708	4	32	-1	1	1	multi-exon	FALSE	canonical	2	6	junction_1	34.6698716467194	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCTGGTCATCAGTTA	5532	False	NA	10	True	NA	NA	NA	133246334	133258102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133246364_133255252_133256321_133257141_133257217_133257597
ES.24603.4	chr4	+	1898	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCTGGTCATCAGTTA	5572	False	NA	10	True	NA	NA	NA	133246374	133258102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
ES.24603.5	chr4	+	1751	2	FSM	ENSMUSG00000037600.17	ENSMUST00000153811.2	841	2	43	-953	11	676	multi-exon	FALSE	canonical	3	33	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACTAGCCACATATAA	5574	False	NA	NA	False	NA	NA	NA	133246376	133256755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133246423_133255050
ES.24603.6	chr4	+	5149	4	NNC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	4912	521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.4966665185054	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTCTTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	133251305	133258622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133252780_133253745_133256321_133257141_133257217_133257597
ES.24604.1	chr4	-	4522	2	NNC	ENSMUSG00000028851.7	novel	204	2	NA	NA	-653	3011	intron_retention	FALSE	canonical	0	0	junction_1	0	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGTGTATATGTATAG	1687	False	NA	NA	False	NA	NA	NA	133261401	133256841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133258749_133258786
ES.24604.10	chr4	-	1341	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	1308.07754248089	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4501	False	NA	NA	False	ATTAAA	-17	NA	133273266	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268596_133273115
ES.24604.11	chr4	-	1299	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_5	1324.36905270212	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4469	False	NA	NA	False	ATTAAA	-17	NA	133273298	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262881_133262978_133263183_133268449_133268528_133273115
ES.24604.12	chr4	-	1692	7	NIC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	17	-2	intron_retention	FALSE	canonical	3	2323	junction_3	549.080342228915	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4477	False	NA	NA	False	ATTAAA	-17	NA	133273290	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.13	chr4	-	2966	7	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	8	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	1403.45807046579	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4468	False	NA	NA	False	ATTAAA	-17	NA	133273299	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133262407_133262451_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.14	chr4	-	2218	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	18	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	1312.60131193049	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4478	False	NA	NA	False	ATTAAA	-17	NA	133273289	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133262398_133262442_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.15	chr4	-	4315	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	1241	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1313.2672140544	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	5701	False	NA	NA	False	ATTAAA	-17	NA	133272066	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133270504_133270849
ES.24604.16	chr4	-	5664	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1313.2672140544	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4478	False	NA	NA	False	ATTAAA	-17	NA	133273289	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133270352_133270571
ES.24604.17	chr4	-	2990	7	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	1403.45807046579	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4453	False	NA	NA	False	ATTAAA	-17	NA	133273314	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133262398_133262433_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.18	chr4	-	2328	7	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	1403.64684740223	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTGTCCCTCGTCTA	4459	False	NA	NA	False	ATTAAA	-16	NA	133273308	133259855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133262407_133262451_133263183_133268449_133268528_133273115
ES.24604.19	chr4	-	1254	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	3	291	junction_6	1233.6345835434	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTCCCTCGTCT	4485	False	NA	NA	False	ATTAAA	-15	NA	133273282	133259856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263150_133268449_133268528_133273115
ES.24604.2	chr4	-	1373	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	-55	-2	-55	2	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCCTCGTCTAGACCC	4405	False	NA	NA	False	ATTAAA	-21	NA	133273362	133259850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.20	chr4	-	1286	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1301.50547052093	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACCTGTGTCCCTCGTC	4478	False	NA	NA	False	ATTAAA	-14	NA	133273289	133259857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260618_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.22	chr4	-	175	2	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	50	8642	50	-6956	5prime_fragment	FALSE	canonical	3	3853	junction_1	0	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGACTTTTTCATTGG	4510	False	NA	NA	False	NA	NA	NA	133273257	133268494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133268528_133273115
ES.24604.4	chr4	-	6252	7	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	4836	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1384.07654733721	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCCTCGTCTAGA	9296	False	NA	NA	False	ATTAAA	-18	NA	133268471	133259853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133265099_133265180
ES.24604.5	chr4	-	1222	7	NIC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	2	65	junction_6	1361.68001829439	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCCTCGTCTAGA	4475	False	NA	NA	False	ATTAAA	-18	NA	133273292	133259853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133273115
ES.24604.6	chr4	-	1287	8	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1312.60131193049	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	4480	False	NA	NA	False	ATTAAA	-17	NA	133273287	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262827_133262887_133262978_133263183_133268449_133268528_133273115
ES.24604.7	chr4	-	4133	6	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	3438	-2	intron_retention	TRUE	non_canonical	0	0	junction_3	1495.51120356887	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	7898	False	NA	NA	False	ATTAAA	-17	NA	133269869	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133260625_133260716_133262398_133262433_133262887_133262978_133263183_133268449
ES.24604.8	chr4	-	4676	4	NNC	ENSMUSG00000028851.7	novel	1316	8	NA	NA	-1824	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	1707.6270735211	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTCCCTCGTCTAG	NA	False	NA	NA	False	ATTAAA	-17	NA	133265062	133259854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133260111_133260505_133262407_133262451_133262887_133262978
ES.24605.1	chr4	+	151	1	Intergenic	novelGene_20285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	133301053	133301204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133301100_133301200
ES.24606.1	chr4	+	1755	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	-20	269	-20	-269	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCCCTCCGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	133302035	133311285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ES.24606.2	chr4	+	2016	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	-13	1	-13	-1	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTTAGTGAAGCC	NA	False	NA	12	True	AATAAA	-19	NA	133302042	133311553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ES.24606.3	chr4	+	3488	11	Fusion	ENSMUSG00000028850.3_ENSMUSG00000028848.14	novel	2004	7	NA	NA	0	-4	multi-exon	FALSE	canonical	0	0	junction_9	58.5217908133372	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTTTTTTAGTGT	NA	False	NA	37	True	NA	NA	NA	133302055	133319042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312181_133313220_133313378_133315810_133315975_133317077_133317209_133318636
ES.24606.4	chr4	+	4473	11	Fusion	ENSMUSG00000028850.3_ENSMUSG00000028848.14	novel	2004	7	NA	NA	5	-6	multi-exon	TRUE	canonical	0	0	junction_7	54.459159009298	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAACGTTTTTTTAGT	NA	False	NA	35	True	NA	NA	NA	133302060	133319040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312970_133313014_133313378_133315810_133315972_133317077_133317209_133318636
ES.24606.5	chr4	+	4860	10	Fusion	ENSMUSG00000028850.3_ENSMUSG00000028848.14	novel	2004	7	NA	NA	5	-6	intron_retention	FALSE	canonical	3	9	junction_6	54.6269051423573	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAACGTTTTTTTAGT	NA	False	NA	35	True	NA	NA	NA	133302060	133319040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_133302522_133305217_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929_133312112_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ES.24606.7	chr4	+	1331	5	NNC	ENSMUSG00000028848.14	novel	1367	5	NA	NA	-17	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.902864125924	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTTTAAATAACGTTT	NA	False	NA	28	True	AAGAAA	-39	NA	133311655	133319033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133312181_133313260_133313378_133315810_133315972_133317077_133317209_133318636
ES.24606.8	chr4	+	3813	4	NIC	ENSMUSG00000028848.14	novel	1367	5	NA	NA	-17	-4	intron_retention	FALSE	canonical	3	134	junction_2	16.0485374896143	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTTTTTTAGTGT	NA	False	NA	37	True	NA	NA	NA	133311655	133319042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133312181_133313220_133315972_133317077_133317209_133318636
ES.24606.9	chr4	+	2619	4	NNC	ENSMUSG00000028848.14	novel	1367	5	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	70.9005563369491	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTTTTTTAGTGT	NA	False	NA	37	True	NA	NA	NA	133311703	133319042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133312181_133313220_133313378_133315810_133315972_133317218
ES.24607.1	chr4	+	183	1	Intergenic	novelGene_20287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	133354749	133354932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133354700_133354900
ES.24608.1	chr4	+	184	1	Intergenic	novelGene_20292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAGAGAGAGGGTAG	7086	False	NA	NA	False	NA	NA	NA	133385845	133386029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133385800_133386000
ES.24609.1	chr4	+	6142	1	Antisense	novelGene_ENSMUSG00000007880.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTACACACACAAAAAAACAA	223	False	NA	NA	False	NA	NA	NA	133404166	133410308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_133404200_133410300
ES.2461.1	chr10	-	2958	20	FSM	ENSMUSG00000010461.17	ENSMUST00000220299.2	3615	20	-49	706	-49	0	multi-exon	FALSE	canonical	0	0	junction_1	0.223296878269436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACAAAATCAAACAAAC	NA	False	NA	NA	False	ACTAAA	-17	NA	23226733	22981367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_22982188_22985869_22985971_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23039291_23039385_23048896_23049022_23102699_23102750_23198945_23199045_23225659_23225789_23226560
ES.24610.1	chr4	+	222	1	Intergenic	novelGene_20295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTCAGTAGTTATGAG	NA	False	NA	NA	False	NA	NA	NA	133529428	133529650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133529400_133529600
ES.24611.1	chr4	+	188	1	Intergenic	novelGene_20297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	133535970	133536158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133536000_133536200
ES.24612.1	chr4	+	135	1	Intergenic	novelGene_20298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133552196	133552331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133552200_133552300
ES.24613.1	chr4	+	3203	2	Antisense	novelGene_ENSMUSG00000003644.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGGTAGACATGTATAC	6887	False	NA	NA	False	AAAAAG	-4	NA	133591309	133595234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_133593713_133594434
ES.24614.1	chr4	+	7109	1	Genic_Genomic	ENSMUSG00000085009.2	novel	NA	NA	NA	NA	-2647	-242	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGAGGTGCAGAGACG	NA	False	NA	NA	False	NA	NA	NA	133596493	133603602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_133596500_133603600
ES.24615.1	chr4	+	395	1	Intergenic	novelGene_20300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCCCTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	133618035	133618430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133618000_133618400
ES.24615.2	chr4	+	217	1	Intergenic	novelGene_20301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATCTGGCAAATTCAC	NA	False	NA	NA	False	NA	NA	NA	133618036	133618253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133618000_133618300
ES.24616.1	chr4	+	160	1	Intergenic	novelGene_20302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	133618451	133618611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133618500_133618600
ES.24617.1	chr4	+	163	1	Intergenic	novelGene_20304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTTTTTTTTTTT	3471	False	NA	3	True	NA	NA	NA	133629469	133629632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133629500_133629600
ES.24618.1	chr4	+	174	1	Intergenic	novelGene_20305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAAACGTATAAA	405	False	NA	NA	False	NA	NA	NA	133633500	133633674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133633500_133633700
ES.24619.1	chr4	+	5591	1	Intergenic	novelGene_20310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAAGCAAGCTACATA	NA	False	NA	NA	False	NA	NA	NA	133683943	133689534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133683900_133689500
ES.2462.1	chr10	+	3806	1	Intergenic	novelGene_1872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	23335449	23339255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_23335400_23339300
ES.24620.1	chr4	+	4629	1	Intergenic	novelGene_20312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACTGGCTTTGATTTTG	NA	False	NA	NA	False	NA	NA	NA	133702148	133706777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133702100_133706800
ES.24621.1	chr4	+	2178	2	Antisense	novelGene_ENSMUSG00000012117.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCACAGAATGAGG	NA	False	NA	NA	False	NA	NA	NA	133709781	133712174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_133711123_133711337
ES.24622.1	chr4	-	8570	21	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-3	129857	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.6872582451761	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCCTAGTGTATATAG	NA	False	NA	NA	False	NA	NA	NA	133481296	133276461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133276471_133406318_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.10	chr4	-	3922	4	NIC	ENSMUSG00000037553.15	novel	896	6	NA	NA	-1046	1676	intron_retention	FALSE	canonical	3	285	junction_3	26.4196896272458	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTGCTTTAGTTTT	NA	False	NA	-15	True	AATAAA	-20	NA	133341391	133334303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133337794_133340233_133340337_133340949_133340999_133341111
ES.24622.101	chr4	-	6792	21	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	100	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	41.6872582451761	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133480822	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779_133480348_133480719
ES.24622.102	chr4	-	5558	1	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	35288	10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	4369	False	NA	NA	False	NA	NA	NA	133412799	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133407200_133412800
ES.24622.104	chr4	-	7562	21	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-14	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	41.6872582451761	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133481307	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779_133480958_133481044
ES.24622.106	chr4	-	6927	21	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	373	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	48.4050358950389	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133480549	133407272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422379_133422447_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.108	chr4	-	3984	1	Intergenic	novelGene_20293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTAGCCCCTGGGACT	1182	False	NA	NA	False	ATTAAA	-11	NA	133431816	133427832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133427800_133431800
ES.24622.109	chr4	-	1516	1	Intergenic	novelGene_20294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTGT	NA	False	NA	NA	False	NA	NA	NA	133522387	133520871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133520900_133522400
ES.24622.110	chr4	-	1908	2	Genic_Genomic	ENSMUSG00000084555.3	novel	138	1	NA	NA	-680	1342	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAGGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	133525710	133523550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133525303_133525554
ES.24622.111	chr4	-	175	1	Intergenic	novelGene_20296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	3284	False	NA	NA	False	NA	NA	NA	133533492	133533317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133533300_133533500
ES.24622.112	chr4	-	4927	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	0	-1792	0	1792	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	7964	False	NA	NA	False	NA	NA	NA	133615108	133572808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.113	chr4	-	4063	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	6	-934	6	934	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGGGGCTGGAGAGATGG	7970	False	NA	NA	False	AATAAA	-22	NA	133615102	133573666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.114	chr4	-	3511	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	-370	-6	-370	6	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCCTTCTGCTCTTTA	7594	False	NA	1	True	AATAAA	-24	NA	133615478	133574594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.115	chr4	-	3796	21	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_3	363.397203484011	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCGCTCTTCCTTCTGCT	7968	False	NA	-4	True	AATAAA	-19	NA	133615104	133574599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578181_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.116	chr4	-	3079	22	FSM	ENSMUSG00000003644.18	ENSMUST00000003741.16	3085	22	11	-5	11	1	multi-exon	FALSE	canonical	3	18	junction_13	262.602024229159	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCGCTCTTCCTTCTGCT	7988	False	NA	-4	True	AATAAA	-19	NA	133615084	133574599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592710_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.117	chr4	-	3193	23	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	345.154331273264	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7973	False	NA	-5	True	AATAAA	-18	NA	133615099	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133612893_133612961_133614880
ES.24622.118	chr4	-	3089	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	266.06961222348	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	8001	False	NA	-5	True	AATAAA	-18	NA	133615071	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596585_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.119	chr4	-	3073	21	FSM	ENSMUSG00000003644.18	ENSMUST00000137486.3	2296	21	-15	-762	-15	0	multi-exon	FALSE	canonical	2	35	junction_20	252.994486105923	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	1533	False	NA	-5	True	AATAAA	-18	NA	133600365	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133600154
ES.24622.12	chr4	-	2779	7	NIC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-55	1675	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	122.239859838489	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTTTGCTTTAGTTT	NA	False	NA	-16	True	AATAAA	-19	NA	133360835	133334304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133360389
ES.24622.121	chr4	-	3025	21	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	272.331099032042	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7992	False	NA	-5	True	AATAAA	-18	NA	133615080	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593173_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.122	chr4	-	3956	20	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_10	279.232198176741	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7972	False	NA	-5	True	AATAAA	-18	NA	133615100	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.123	chr4	-	3041	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-306	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_21	263.446569987342	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7658	False	NA	-5	True	AATAAA	-18	NA	133615414	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133615280
ES.24622.124	chr4	-	3084	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	266.064243005135	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	8002	False	NA	-5	True	AATAAA	-18	NA	133615070	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588140_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.125	chr4	-	3583	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-502	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	260.971367053493	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	10004	False	NA	-5	True	AATAAA	-18	NA	133615610	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575432_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.126	chr4	-	4010	20	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	24	0	intron_retention	FALSE	canonical	1	2	junction_10	278.069094026344	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	8001	False	NA	-5	True	AATAAA	-18	NA	133615071	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.127	chr4	-	3091	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_20	253.826811034611	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7963	False	NA	-5	True	AATAAA	-18	NA	133615109	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133614880
ES.24622.129	chr4	-	5162	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-4	0	intron_retention	FALSE	canonical	3	996	junction_6	99.5390752418366	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7973	False	NA	-5	True	AATAAA	-18	NA	133615099	133574600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.13	chr4	-	3727	8	NNC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	41	1675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	116.925931552362	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTTTGCTTTAGTTT	NA	False	NA	-16	True	AATAAA	-19	NA	133360739	133334304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133353627_133354672_133360389
ES.24622.130	chr4	-	3120	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	265.306044130461	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7963	False	NA	-9	True	AATAAA	-14	NA	133615109	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578487_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.131	chr4	-	3618	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	996	junction_6	99.1992313478285	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7950	False	NA	-9	True	AATAAA	-14	NA	133615122	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.132	chr4	-	3375	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	3	0	intron_retention	FALSE	canonical	3	996	junction_6	98.1239012677339	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7967	False	NA	-9	True	AATAAA	-14	NA	133615105	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.133	chr4	-	2995	21	NNC	ENSMUSG00000003644.18	novel	2982	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	260.286087795718	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7980	False	NA	-9	True	AATAAA	-14	NA	133615092	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599258_133614898
ES.24622.134	chr4	-	4535	6	NNC	ENSMUSG00000003644.18	novel	2982	21	NA	NA	6243	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	486.186219467397	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	NA	False	NA	-9	True	AATAAA	-14	NA	133581998	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133579065_133579266
ES.24622.135	chr4	-	3829	20	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	9	0	intron_retention	FALSE	canonical	3	996	junction_6	100.138878632879	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7986	False	NA	-9	True	AATAAA	-14	NA	133615086	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.136	chr4	-	3097	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	265.92245643132	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7992	False	NA	-9	True	AATAAA	-14	NA	133615080	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591376_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.138	chr4	-	3119	22	NNC	ENSMUSG00000003644.18	novel	3085	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	266.169170286276	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7970	False	NA	-9	True	AATAAA	-14	NA	133615102	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592737_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.140	chr4	-	4303	19	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	996	junction_6	102.863207738106	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7968	False	NA	-9	True	AATAAA	-14	NA	133615104	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592743_133593073_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.141	chr4	-	3179	23	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	347.736173385789	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7968	False	NA	-9	True	AATAAA	-14	NA	133615104	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592584_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.142	chr4	-	2985	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	272.490385151477	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7967	False	NA	-9	True	AATAAA	-14	NA	133615105	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.143	chr4	-	3150	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	266.166904144144	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7966	False	NA	-9	True	AATAAA	-14	NA	133615106	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588275_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.145	chr4	-	3881	20	NIC	ENSMUSG00000003644.18	novel	3085	22	NA	NA	24	0	intron_retention	FALSE	canonical	3	996	junction_6	101.749107546094	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	8001	False	NA	-9	True	AATAAA	-14	NA	133615071	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.147	chr4	-	3319	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	15	0	intron_retention	FALSE	canonical	3	996	junction_6	97.5537159722786	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7992	False	NA	-9	True	AATAAA	-14	NA	133615080	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.148	chr4	-	3304	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	265.737351789421	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7931	False	NA	-9	True	AATAAA	-14	NA	133615141	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.149	chr4	-	3474	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	996	junction_5	96.5185344894959	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7968	False	NA	-9	True	AATAAA	-14	NA	133615104	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.15	chr4	-	4946	5	ISM	ENSMUSG00000037553.15	ENSMUST00000135999.8	896	6	-1134	-1675	-1134	1675	intron_retention	FALSE	canonical	3	285	junction_4	23.2096423927643	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTTTGCTTTAGTTT	9478	False	NA	-16	True	AATAAA	-19	NA	133344012	133334304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111
ES.24622.150	chr4	-	3029	22	NNC	ENSMUSG00000003644.18	novel	3085	22	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	351.654985781438	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7994	False	NA	-9	True	AATAAA	-14	NA	133615078	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575932_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592710_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.151	chr4	-	3058	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	264.83384599857	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7998	False	NA	-9	True	AATAAA	-14	NA	133615074	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575932_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.152	chr4	-	3215	23	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	461.316271639467	1077	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	8010	False	NA	-9	True	AATAAA	-14	NA	133615062	133574604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590962_133591144_133591316_133591382_133592335_133592425_133592531_133592584_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.153	chr4	-	3231	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	265.23028970305	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7940	False	NA	-10	True	AATAAA	-13	NA	133615132	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133576048_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.154	chr4	-	3770	20	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	36	-1	intron_retention	FALSE	canonical	3	996	junction_6	99.5347069857386	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	8013	False	NA	-10	True	AATAAA	-13	NA	133615059	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.156	chr4	-	4328	20	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	996	junction_6	99.0031197919129	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7962	False	NA	-10	True	AATAAA	-13	NA	133615110	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.157	chr4	-	3238	22	NNC	ENSMUSG00000003644.18	novel	3085	22	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	353.123002472628	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7963	False	NA	-10	True	AATAAA	-13	NA	133615109	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592710_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.159	chr4	-	3172	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	265.968541948333	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7988	False	NA	-10	True	AATAAA	-13	NA	133615084	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588320_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.16	chr4	-	2862	9	NNC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-25	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.478236992564	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTTTGCTTTAGTTT	NA	False	NA	-16	True	AATAAA	-19	NA	133360805	133334304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133335143_133335190_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.160	chr4	-	3944	20	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	6	-1	intron_retention	FALSE	canonical	3	996	junction_5	98.6855999902182	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7970	False	NA	-10	True	AATAAA	-13	NA	133615102	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.161	chr4	-	3150	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	256.922736473452	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7991	False	NA	-10	True	AATAAA	-13	NA	133615081	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599332_133608197_133608273_133614880
ES.24622.162	chr4	-	3240	21	NIC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	996	junction_5	99.5693225848203	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCGCCCGCTCTTCCT	7973	False	NA	-10	True	AATAAA	-13	NA	133615099	133574605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133575486_133575832_133575971_133578011_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.166	chr4	-	2604	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	-1	532	-1	3	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTACAAGATCCATT	7963	False	NA	NA	False	NA	NA	NA	133615109	133575132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.167	chr4	-	3272	22	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	35	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	265.036984541032	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTACAAGATCCATT	8012	False	NA	NA	False	NA	NA	NA	133615060	133575132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133589575_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.168	chr4	-	2588	23	NNC	ENSMUSG00000003644.18	novel	3135	22	NA	NA	24	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	347.736173385789	1076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAAAAAAATGGCGTC	8001	False	NA	NA	False	NA	NA	NA	133615071	133575162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592531_133592584_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.17	chr4	-	3252	2	ISM	ENSMUSG00000037553.15	ENSMUST00000142382.2	260	3	1192	-1744	1192	1674	3prime_fragment	FALSE	canonical	3	331	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTTGCTTTAGTT	155	False	NA	-17	True	AATAAA	-18	NA	133339153	133334305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133336085_133337680
ES.24622.170	chr4	-	2238	20	ISM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	23	3262	10	5	5prime_fragment	FALSE	canonical	3	996	junction_4	98.5276934226674	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCGCGCCTCCTCTGTTTG	7987	False	NA	NA	False	AATAAA	-13	NA	133615085	133577862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ES.24622.171	chr4	-	176	2	Intergenic	novelGene_20299	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	55	junction_1	0	1105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAGGA	9919	False	NA	NA	False	NA	NA	NA	133664172	133579086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133579215_133664124
ES.24622.172	chr4	-	4227	1	NIC	ENSMUSG00000003644.18	novel	228	4	NA	NA	-1923	-464	mono-exon	FALSE	NA	NA	NA	NA	NA	993	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCGGCTCTACCTCATTA	NA	False	NA	NA	False	NA	NA	NA	133603965	133599738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133599700_133604000
ES.24622.173	chr4	-	282	1	Intergenic	novelGene_20303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTACAAATGTCATG	6788	False	NA	NA	False	NA	NA	NA	133626836	133626554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133626600_133626800
ES.24622.174	chr4	-	832	2	Intergenic	novelGene_20306	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATGAGTACAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	133638323	133633875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133633965_133637580
ES.24622.175	chr4	-	2785	3	Intergenic	novelGene_20307	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	557	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTAGTTCAATCATGG	NA	False	NA	NA	False	AGTAAA	-4	NA	133702998	133659558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133659567_133677451_133677613_133700382
ES.24622.176	chr4	-	177	1	Intergenic	novelGene_20308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAGAAAA	9914	False	NA	NA	False	NA	NA	NA	133664177	133664000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133664000_133664200
ES.24622.177	chr4	-	183	1	Intergenic	novelGene_20309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	9071	False	NA	NA	False	NA	NA	NA	133677612	133677429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133677400_133677600
ES.24622.178	chr4	-	3479	6	FSM	ENSMUSG00000012117.14_ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	-2216	2	-1567	-2	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCTCTGATCTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	133697528	133692050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ES.24622.179	chr4	-	1834	4	NIC	ENSMUSG00000003038.16	novel	711	5	NA	NA	3	-3	intron_retention	FALSE	canonical	3	1835	junction_2	564.771536896902	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	133695216	133692051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133692885_133693261_133694107_133694267_133694313_133695105
ES.24622.18	chr4	-	4586	5	NIC	ENSMUSG00000037553.15	novel	896	6	NA	NA	-1403	1674	intron_retention	FALSE	canonical	3	285	junction_3	24.6322958735072	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTTGCTTTAGTT	9209	False	NA	-17	True	AATAAA	-18	NA	133344281	133334305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133336085_133337680_133337794_133340233_133340999_133341111_133341250_133342490
ES.24622.180	chr4	-	6274	13	Fusion	ENSMUSG00000012117.14_ENSMUSG00000003038.16	novel	3179	10	NA	NA	6	-4	intron_retention	FALSE	canonical	3	54	junction_12	1061.37571562676	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCCTCTGATCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	133728176	133692052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.181	chr4	-	3150	1	NIC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	-2	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAATGCTGCCTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	133695207	133692057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133692100_133695200
ES.24622.182	chr4	-	1107	5	NIC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	3	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1210.16845418314	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGAATGCTGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	133695216	133692059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133692885_133693261_133693358_133694076_133694107_133694267_133694313_133695105
ES.24622.183	chr4	-	1678	6	FSM	ENSMUSG00000003038.16	ENSMUST00000105893.8	973	6	-464	-241	3	-11	multi-exon	FALSE	canonical	3	9	junction_5	1060.38683507482	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGAATGCTGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	133695216	133692059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133694585
ES.24622.184	chr4	-	2023	3	NIC	ENSMUSG00000003038.16	novel	927	4	NA	NA	-37	-11	intron_retention	FALSE	canonical	3	2248	junction_1	186	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGAATGCTGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	133695257	133692059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133693358_133693739_133694313_133695105
ES.24622.185	chr4	-	1435	5	FSM	ENSMUSG00000003038.16	ENSMUST00000130809.8	711	5	13	-737	-2	-11	multi-exon	FALSE	canonical	3	1835	junction_3	507.001664198452	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGAATGCTGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	133695207	133692059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133692885_133693261_133693358_133693739_133694107_133694267_133694313_133695105
ES.24622.186	chr4	-	1074	4	NIC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	-2	-11	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	1346.45443872251	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGGAATGCTGCCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	133695207	133692059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133692885_133693261_133693358_133693739_133693791_133695105
ES.24622.187	chr4	-	1154	6	NNC	ENSMUSG00000003038.16	novel	1265	6	NA	NA	3	-12	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_2	1075.89802490757	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTTGGAATGCTGCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	133695216	133692060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133692885_133693261_133693355_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ES.24622.188	chr4	-	1706	3	FSM	ENSMUSG00000003038.16	ENSMUST00000145025.8	2159	3	2	451	2	0	multi-exon	FALSE	canonical	3	2248	junction_2	483	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTTTTAAGCTAT	NA	False	NA	NA	False	TATAAA	-19	NA	133695217	133692752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133692885_133693261_133693358_133693739
ES.24622.19	chr4	-	2884	8	NNC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-7	1671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.163238182032	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATTTGCTTTGCTTTA	NA	False	NA	-20	True	AATAAA	-15	NA	133360787	133334308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133336085_133337680_133337794_133340233_133340327_133340943_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.190	chr4	-	497	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	64	704	-28	0	multi-exon	FALSE	canonical	3	1307	junction_3	652.309558415328	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTTTTTTAAGCTAT	NA	False	NA	NA	False	TATAAA	-19	NA	133695248	133692752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ES.24622.191	chr4	-	840	5	NIC	ENSMUSG00000003038.16	novel	544	6	NA	NA	-35	-11	intron_retention	FALSE	canonical	0	0	junction_4	1166.0802663196	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCGTTTTACTTTTT	NA	False	NA	NA	False	TATAAA	-6	NA	133695996	133692765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133692885_133693261_133693358_133693739_133694107_133694267_133694313_133695783
ES.24622.192	chr4	-	3220	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	-4	3	-4	-3	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGAGAGAAGGTTTTGCT	NA	False	NA	NA	False	TTTAAA	-39	NA	133728205	133696341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.194	chr4	-	3093	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	44	-4	28	4	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTTGTGTGGTAACT	NA	False	NA	NA	False	AAAAAG	-25	NA	133728154	133696363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
ES.24622.195	chr4	-	3080	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	0	-2190	0	4	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTTGTGTGGTAACT	NA	False	NA	NA	False	AAAAAG	-25	NA	133728229	133696363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
ES.24622.196	chr4	-	2995	9	NIC	ENSMUSG00000012117.14	novel	3133	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	27.046256672597	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGAAATTAAGATGGG	NA	False	NA	NA	False	NA	NA	NA	133728175	133696485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
ES.24622.198	chr4	-	2508	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	62	649	43	-502	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCAATCAGTGCACCC	NA	False	NA	NA	False	AAAAAG	-17	NA	133728139	133696987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.199	chr4	-	2429	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	22	-1561	-6	-507	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAGAGCCAATCAGTG	NA	False	NA	NA	False	AAAAAG	-12	NA	133728207	133696992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
ES.24622.2	chr4	-	177	1	Intergenic	novelGene_20286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	133315022	133314845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133314800_133315000
ES.24622.200	chr4	-	1558	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105889.4	890	9	-1	-667	-1	345	multi-exon	FALSE	canonical	2	7	junction_8	21.5928228816892	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGATAGGCAGCCAACAT	NA	False	NA	NA	False	NA	NA	NA	133728230	133697886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728177
ES.24622.201	chr4	-	2404	11	NNC	ENSMUSG00000012117.14	novel	3179	10	NA	NA	-4	188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.4712567273695	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGCCCGTCCCTGTTTC	NA	False	NA	-12	True	AATACA	-32	NA	133728205	133698043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133722402_133722610_133723367_133724047_133724132_133724250_133727579_133727705_133728035
ES.24622.202	chr4	-	1495	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	8	1716	5	177	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATTAGCTATATGCCC	NA	False	NA	-23	True	AATACA	-21	NA	133728193	133698054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.203	chr4	-	1413	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	27	1693	11	171	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTAATTCATTAGCTAT	NA	False	NA	-29	True	AATACA	-15	NA	133728171	133698060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
ES.24622.204	chr4	-	1291	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	44	1884	25	9	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATTGGGCTCCCTCTGT	NA	False	NA	NA	False	NA	NA	NA	133728157	133698222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.205	chr4	-	3140	2	Intergenic	novelGene_20311	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCAATTTATGGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	133706195	133701296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133701524_133703282
ES.24622.206	chr4	-	1201	8	NNC	ENSMUSG00000012117.14	novel	3219	9	NA	NA	85	-1831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8366089242703	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGATGCTGGTACTTG	NA	False	NA	NA	False	AATAAA	-14	NA	133728097	133709335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133709756_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ES.24622.207	chr4	-	7712	2	NNC	ENSMUSG00000012117.14	novel	748	7	NA	NA	-4	-12757	intron_retention	TRUE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133728186	133720261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133724865_133725077
ES.24622.208	chr4	-	3383	1	Genic_Genomic	ENSMUSG00000012117.14	novel	NA	NA	NA	NA	-1165	-18507	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	133729394	133726011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133726000_133729400
ES.24622.21	chr4	-	2837	8	NNC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	45	1667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.163238182032	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGCTGATTTGCTTTGC	NA	False	NA	-24	True	AATAAA	-11	NA	133360735	133334312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133336085_133337680_133337794_133340233_133340344_133340951_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.22	chr4	-	5597	3	NNC	ENSMUSG00000037553.15	novel	316	2	NA	NA	-25	-5175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTGGTAACTTCTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	133360805	133345801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133348856_133352544_133354672_133360389
ES.24622.23	chr4	-	2632	2	ISM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	-19	19840	-19	2138	5prime_fragment	FALSE	canonical	3	336	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTAGTGTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	133360799	133352449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133354672_133360389
ES.24622.24	chr4	-	5499	2	NNC	ENSMUSG00000037553.15	novel	316	2	NA	NA	-7	2129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAAACACTTTAG	NA	False	NA	NA	False	NA	NA	NA	133360787	133352458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133354759_133357588
ES.24622.25	chr4	-	2828	1	Intergenic	novelGene_20288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133360143	133357315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133357300_133360100
ES.24622.26	chr4	-	184	1	Intergenic	novelGene_20289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAGCATAAACA	NA	False	NA	NA	False	NA	NA	NA	133363354	133363170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133363200_133363400
ES.24622.27	chr4	-	275	1	Intergenic	novelGene_20290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	133375389	133375114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133375100_133375400
ES.24622.28	chr4	-	221	1	Intergenic	novelGene_20291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCACAGCAAGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133382835	133382614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133382600_133382800
ES.24622.29	chr4	-	2536	5	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	27	4450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.945278472209	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTATATGAGTACTCA	NA	False	NA	NA	False	NA	NA	NA	133399931	133383247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133383316_133389181_133390103_133391968_133393091_133397048_133397172_133399629
ES.24622.3	chr4	-	1345	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	268	0	268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	9998	False	NA	-10	True	AATAAA	-18	NA	133329211	133327866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133327900_133329200
ES.24622.30	chr4	-	4968	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	39	-1028	39	1028	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGTGGTGCACACGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	133399919	133386669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ES.24622.31	chr4	-	3308	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	29	-2347	29	480	multi-exon	FALSE	canonical	3	52	junction_1	36	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGATGTCTTTTTGTTC	NA	False	NA	1	True	AATACA	-24	NA	133399929	133387217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133397048_133397172_133399629
ES.24622.32	chr4	-	4396	1	Genic_Genomic	ENSMUSG00000043257.16	novel	NA	NA	NA	NA	8344	479	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGATGTCTTTTTGTT	NA	False	NA	0	True	AATACA	-23	NA	133391614	133387218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133387200_133391600
ES.24622.33	chr4	-	4377	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	28	478	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.886537930254	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGGATGTCTTTTTGT	NA	False	NA	-1	True	AATACA	-22	NA	133399930	133387219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390051_133391968_133393091_133397048_133397172_133399629
ES.24622.34	chr4	-	4442	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	14	-477	14	477	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGGATGTCTTTTTG	NA	False	NA	-2	True	AATACA	-21	NA	133399944	133387220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ES.24622.35	chr4	-	4467	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	11	475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.0089592788206	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAAGTGGATGTCTTTT	NA	False	NA	-4	True	AATACA	-19	NA	133399947	133387222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133397048_133397172_133399605
ES.24622.36	chr4	-	4728	5	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	57	474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.0885679155544	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGAAGTGGATGTCTTT	NA	False	NA	-5	True	AATACA	-18	NA	133399901	133387223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133395936_133396269_133397048_133397172_133399629
ES.24622.37	chr4	-	2904	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	35	834	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	28.1937739383873	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAATCTTGGCTCCC	NA	False	NA	-7	True	NA	NA	NA	133399923	133388730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133397048_133397165_133399629
ES.24622.38	chr4	-	3801	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	-856	1034	-856	833	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGAATCTTGGCTCC	NA	False	NA	-8	True	NA	NA	NA	133400814	133388731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ES.24622.39	chr4	-	1667	2	NIC	ENSMUSG00000043257.16	novel	990	3	NA	NA	28	828	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGGTCTGAATCTTG	NA	False	NA	-13	True	AGTAAA	-45	NA	133399930	133388736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133390103_133399629
ES.24622.4	chr4	-	1174	2	Genic_Genomic	ENSMUSG00000047281.4	novel	1613	1	NA	NA	341	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	NA	False	NA	-10	True	AATAAA	-18	NA	133329138	133327866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133328289_133328386
ES.24622.40	chr4	-	1790	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	28	-828	28	828	multi-exon	FALSE	canonical	3	52	junction_1	36	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGGTCTGAATCTTG	NA	False	NA	-13	True	AGTAAA	-45	NA	133399930	133388736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133397048_133397172_133399629
ES.24622.43	chr4	-	1821	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	-832	828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.5130350811336	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGGTCTGAATCTTG	NA	False	NA	-13	True	AGTAAA	-45	NA	133400790	133388736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133397048_133397172_133400074_133400283_133400666
ES.24622.44	chr4	-	1780	3	NNC	ENSMUSG00000043257.16	novel	990	3	NA	NA	62	828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGGTCTGAATCTTG	NA	False	NA	-13	True	AGTAAA	-45	NA	133399896	133388736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133397048_133397172_133399605
ES.24622.45	chr4	-	3352	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	-857	828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.0089592788206	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGGTCTGAATCTTG	NA	False	NA	-13	True	AGTAAA	-45	NA	133400815	133388736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133397048_133397172_133400074
ES.24622.46	chr4	-	3876	1	NIC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	7345	827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGGGTCTGAATCTT	NA	False	NA	-14	True	AGTAAA	-44	NA	133392613	133388737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133388700_133392600
ES.24622.47	chr4	-	2881	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	6	827	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.886537930254	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGGGTCTGAATCTT	NA	False	NA	-14	True	AGTAAA	-44	NA	133399952	133388737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390051_133391968_133393091_133397048_133397172_133399629
ES.24622.48	chr4	-	3270	5	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	1	827	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.0885679155544	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGGGTCTGAATCTT	NA	False	NA	-14	True	AGTAAA	-44	NA	133399957	133388737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133395936_133396269_133397048_133397172_133399629
ES.24622.49	chr4	-	2880	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	38	826	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.886537930254	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGGGTCTGAATCT	NA	False	NA	-15	True	AGTAAA	-43	NA	133399920	133388738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391988_133393091_133397048_133397172_133399629
ES.24622.5	chr4	-	2567	10	NNC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	135.503177494519	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTGGAGTGTTTGAGC	NA	False	NA	NA	False	AATAAA	-23	NA	133360785	133332614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133333892_133334001_133334082_133335984_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.50	chr4	-	2932	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	30	826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.0089592788206	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGGGTCTGAATCT	NA	False	NA	-15	True	AGTAAA	-43	NA	133399928	133388738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133397048_133397172_133399605
ES.24622.51	chr4	-	2215	3	NNC	ENSMUSG00000043257.16	novel	990	3	NA	NA	-844	826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGGGTCTGAATCT	NA	False	NA	-15	True	AGTAAA	-43	NA	133400802	133388738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133397048_133397172_133400074
ES.24622.53	chr4	-	2135	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	27	1817	27	50	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCCTGGAACTCAC	NA	False	NA	48	True	NA	NA	NA	133399931	133389514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ES.24622.54	chr4	-	2076	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	57	41	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.886537930254	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTGCCCTGGTTGTCCT	NA	False	NA	39	True	NA	NA	NA	133399901	133389523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391988_133393091_133397048_133397172_133399629
ES.24622.55	chr4	-	1891	4	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	246	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.0089592788206	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTCTTCTTGTTTTT	NA	False	NA	-1	True	NA	NA	NA	133399712	133389563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133390103_133391968_133393091_133397048_133397172_133399605
ES.24622.56	chr4	-	2615	3	NNC	ENSMUSG00000043257.16	novel	653	3	NA	NA	2844	-1309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGCTTAAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	133397114	133390873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133393091_133395936_133396269_133397048
ES.24622.57	chr4	-	2633	3	ISM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	30	3182	30	-1315	5prime_fragment	FALSE	canonical	3	69	junction_1	27.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTGATCTGGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	133399928	133390879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133393091_133397048_133397172_133399629
ES.24622.58	chr4	-	5730	2	NNC	ENSMUSG00000043257.16	novel	3979	4	NA	NA	9	-1809	intron_retention	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTCAATACCATCCT	NA	False	NA	NA	False	NA	NA	NA	133399949	133391373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133393091_133395936
ES.24622.59	chr4	-	2142	3	ISM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	27	3676	27	-1809	5prime_fragment	FALSE	canonical	3	69	junction_1	27.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTCAATACCATCCT	NA	False	NA	NA	False	NA	NA	NA	133399931	133391373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133393091_133397048_133397172_133399629
ES.24622.6	chr4	-	3287	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	-387	1680	-387	-1680	multi-exon	FALSE	canonical	3	285	junction_4	22.238961949053	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTTGCTTTTATT	NA	False	NA	-1	True	AATAAA	-34	NA	133361167	133334289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.60	chr4	-	2160	1	Genic_Genomic	ENSMUSG00000007880.17	novel	NA	NA	NA	NA	41765	2156	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTCGCTTTCCTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	133406322	133404162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133404200_133406300
ES.24622.61	chr4	-	7149	20	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-30	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	40.3589846927467	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCTTTTTTTATTTTC	NA	False	NA	1	True	AATAAA	-27	NA	133481323	133406312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133481224
ES.24622.62	chr4	-	6367	9	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	30389	5	intron_retention	FALSE	non_canonical	0	0	junction_8	54.0403495084923	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGCTTTTTTTATTTT	NA	False	NA	0	True	AATAAA	-26	NA	133417698	133406313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133417385_133417442
ES.24622.63	chr4	-	6939	15	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	24540	0	intron_retention	FALSE	canonical	3	9	junction_7	43.0189801490136	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	9451	False	NA	-5	True	AATAAA	-21	NA	133423547	133406318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133422142_133422882_133422973_133423226
ES.24622.66	chr4	-	7664	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.0364389893387	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	-5	True	AATAAA	-21	NA	133484098	133406318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483481
ES.24622.69	chr4	-	7821	20	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	369	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	41.2861777893558	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	-5	True	AATAAA	-21	NA	133480553	133406318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.7	chr4	-	4561	6	FSM	ENSMUSG00000037553.15	ENSMUST00000135999.8	896	6	-1988	-1677	-1988	1677	multi-exon	FALSE	canonical	3	285	junction_4	22.3571017799714	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	8624	False	NA	-14	True	AATAAA	-21	NA	133344866	133334302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490
ES.24622.71	chr4	-	7414	20	FSM	ENSMUSG00000007880.17	ENSMUST00000008024.7	6486	20	5	-933	5	0	multi-exon	FALSE	canonical	2	10	junction_19	38.8360428873336	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	-5	True	AATAAA	-21	NA	133484075	133406318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483705
ES.24622.72	chr4	-	7916	19	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	523	-2	intron_retention	FALSE	canonical	3	56	junction_18	33.0418739192977	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	133480399	133406320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.73	chr4	-	8570	20	FSM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	-385	2	-14	-2	multi-exon	FALSE	canonical	3	56	junction_19	32.8919156684966	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	133481307	133406320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.74	chr4	-	10126	19	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	400	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	43.6215486448251	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	133480522	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133417385_133417442_133418591_133420109_133420220_133420315_133420462_133421068_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.76	chr4	-	4672	8	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	33200	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	58.2822127799778	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	2281	False	NA	-8	True	AATAAA	-18	NA	133414887	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413723_133413868_133413950_133414102_133414514_133414688_133414848
ES.24622.77	chr4	-	7309	21	Fusion	ENSMUSG00000003644.18_ENSMUSG00000007880.17	novel	8187	20	NA	NA	5	-3	multi-exon	FALSE	canonical	0	0	junction_19	253.206259796238	1450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	7969	False	NA	-8	True	AATAAA	-18	NA	133615103	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133608227_133608273_133614880
ES.24622.79	chr4	-	5542	13	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	26891	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.6480345201801	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	133421196	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413602_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068
ES.24622.80	chr4	-	7909	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	40.3589846927467	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	133484146	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483278
ES.24622.81	chr4	-	7032	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	40.3589846927467	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTGTGAAGCTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	133481293	133406321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450285_133481224
ES.24622.82	chr4	-	7097	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	823	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	39.2857984673703	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTTTGTGAAGCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	133483257	133406322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483200
ES.24622.83	chr4	-	4983	6	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	33141	-4	intron_retention	FALSE	canonical	3	132	junction_4	17.1347599924831	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTTTGTGAAGCTTT	2222	False	NA	-9	True	AATAAA	-17	NA	133414946	133406322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133414102_133414514
ES.24622.85	chr4	-	8384	19	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	106	-5	intron_retention	FALSE	canonical	3	56	junction_18	32.3942248320458	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGACTTTGTGAAGCTT	NA	False	NA	-10	True	AATAAA	-16	NA	133480816	133406323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.86	chr4	-	6578	1	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	35186	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGACTTTGTGAAGCTT	4267	False	NA	-10	True	AATAAA	-16	NA	133412901	133406323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133406300_133412900
ES.24622.87	chr4	-	8708	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	40.3589846927467	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGACTTTGTGAAGCTT	NA	False	NA	-10	True	AATAAA	-16	NA	133484067	133406323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133482398
ES.24622.89	chr4	-	4620	7	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	33400	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.8397256915432	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGACTTTGTGAAGCT	2481	False	NA	-11	True	AATAAA	-15	NA	133414687	133406324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413558_133413637_133413714_133413868_133413950_133414102_133414514
ES.24622.9	chr4	-	3550	7	NIC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	-51	1676	intron_retention	FALSE	canonical	3	285	junction_3	23.5259903558218	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTGCTTTAGTTTT	NA	False	NA	-15	True	AATAAA	-20	NA	133360831	133334303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133336085_133337680_133337794_133340233_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ES.24622.90	chr4	-	4401	7	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	33998	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.937244225282	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGACTTTGTGAAGCT	3079	False	NA	-11	True	AATAAA	-15	NA	133414089	133406324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133407884_133407936_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950
ES.24622.91	chr4	-	7742	15	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	25140	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	44.3149672969598	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGACTTTGTGAAGCT	9981	False	NA	-11	True	AATAAA	-15	NA	133422947	133406324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133417385_133417442_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882
ES.24622.97	chr4	-	7185	19	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	157	10	intron_retention	FALSE	canonical	3	56	junction_18	33.7108712362373	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133480765	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ES.24622.98	chr4	-	6190	20	NNC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	811	10	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	39.2857984673703	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133483269	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483200
ES.24622.99	chr4	-	6219	20	NIC	ENSMUSG00000007880.17	novel	8187	20	NA	NA	-29	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	40.3589846927467	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAAAACCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133481322	133407241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133481224
ES.24623.1	chr4	-	3538	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	-43	10	-43	-10	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTACTGGTCTCTCTGA	8207	False	NA	-1	True	AATAAA	-20	NA	133746195	133730650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
ES.24623.4	chr4	-	3630	4	NNC	ENSMUSG00000050966.10	novel	3505	4	NA	NA	152	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	34.0293990543471	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGGTACTGGTCTCT	8402	False	NA	-5	True	AATAAA	-16	NA	133746000	133730654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133733633_133735221_133735407_133745363_133745561_133745730
ES.24623.5	chr4	-	3353	3	FSM	ENSMUSG00000050966.10	ENSMUST00000176113.8	394	3	-60	-2899	-60	-15	multi-exon	FALSE	canonical	0	0	junction_2	35	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTTGGTACTGGTCTC	NA	False	NA	-6	True	AATAAA	-15	NA	133739757	133730655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133733633_133735221_133735407_133739566
ES.24623.7	chr4	-	2465	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	24	1016	24	-1016	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTTTGGGGTTTTAT	8274	False	NA	-6	True	TATAAA	-14	NA	133746128	133731656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
ES.24623.8	chr4	-	2306	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	24	1175	24	-1175	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGATCTTGGT	8274	False	NA	NA	False	AATAGA	-18	NA	133746128	133731815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
ES.24624.1	chr4	-	160	1	Intergenic	novelGene_20313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGAGAGAGAGAG	NA	False	NA	-8	True	NA	NA	NA	133768815	133768655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133768700_133768800
ES.24625.1	chr4	+	1492	1	Genic_Genomic	ENSMUSG00000049410.9	novel	NA	NA	NA	NA	4725	1058	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCAATTTTAGCCTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	133785873	133787365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_133785900_133787400
ES.24626.1	chr4	+	6036	22	FSM	ENSMUSG00000012123.18	ENSMUST00000227683.2	5578	22	-457	-1	-457	1	multi-exon	FALSE	canonical	1	2	junction_1	46.1690672034849	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGTCTCGTCTCTG	NA	False	NA	18	True	NA	NA	NA	133787668	133819816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133788242_133790613_133790684_133792549_133793266_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.11	chr4	+	1856	15	NNC	ENSMUSG00000012123.18	novel	2714	6	NA	NA	801	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	44.8184546537586	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133807030	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133807152_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.12	chr4	+	2101	14	NNC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	975	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.5797629754632	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133807204	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809103_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.13	chr4	+	1172	9	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13501	3	-359	0	3prime_fragment	FALSE	canonical	3	45	junction_1	25.936219847927	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133809263	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.14	chr4	+	2897	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-71	-1	intron_retention	FALSE	canonical	3	103	junction_1	10.4947076609541	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809551	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133818548_133819360_133819521_133819629
ES.24626.15	chr4	+	1160	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13849	-1	-11	1	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGTCTCGTCTCTG	NA	False	NA	18	True	NA	NA	NA	133809611	133819816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.16	chr4	+	1020	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	40.2478432824529	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809616	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133809759_133809885_133809999_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.17	chr4	+	1038	7	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133809616	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.18	chr4	+	4091	4	FSM	ENSMUSG00000012123.18	ENSMUST00000149080.2	606	4	-42	-3443	-4	-1	multi-exon	FALSE	canonical	3	103	junction_1	14.1656862405839	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809618	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103
ES.24626.19	chr4	+	1072	7	NNC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.7933929720341	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133809631	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819579
ES.24626.2	chr4	+	6725	23	NNC	ENSMUSG00000012123.18	novel	5578	22	NA	NA	-298	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.9354766050716	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGGTGGTCTCGTCTC	NA	False	NA	16	True	NA	NA	NA	133787827	133819814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133788242_133790613_133790684_133792549_133793266_133794221_133794285_133798876_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809103_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.20	chr4	+	761	5	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	20340	9	-2023	-1	3prime_fragment	FALSE	canonical	3	106	junction_2	7.15454401062709	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTATGCTGCTGGTGGT	2555	False	NA	8	True	NA	NA	NA	133816102	133819806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.3	chr4	+	5823	23	NNC	ENSMUSG00000012123.18	novel	880	9	NA	NA	1633	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.8969328853134	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133789758	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133790060_133790613_133790684_133792549_133793266_133794221_133794285_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.4	chr4	+	4722	20	NNC	ENSMUSG00000012123.18	novel	5578	22	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.7077310298846	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133793256	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133793306_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.5	chr4	+	6796	18	NIC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-17	0	intron_retention	FALSE	canonical	2	3	junction_1	43.5226544834664	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133795745	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133795848_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133818548_133819360_133819521_133819629
ES.24626.6	chr4	+	3643	19	NNC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	5013	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	44.0990747642366	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133800775	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133802247_133802621_133802670_133802751_133802865_133803000_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809995_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24626.7	chr4	+	3934	14	NNC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-4310	0	intron_retention	FALSE	non_canonical	0	0	junction_13	44.5759772913538	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133801838	133819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809999_133814796_133814927_133816103_133816244_133816582_133817059_133818849
ES.24626.8	chr4	+	4390	17	NNC	ENSMUSG00000012123.18	novel	4761	20	NA	NA	-4182	-1	intron_retention	FALSE	canonical	0	0	junction_10	44.8650755042271	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGCTGGTGGTCTCGT	NA	False	NA	13	True	NA	NA	NA	133801966	133819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809103_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133818548_133819360_133819521_133819629
ES.24626.9	chr4	+	1975	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10291	-1	-95	1	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGTCTCGTCTCTG	NA	False	NA	18	True	NA	NA	NA	133806053	133819816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ES.24627.1	chr4	-	195	1	Intergenic	novelGene_20314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGAAGATTCTAATTCA	NA	False	NA	NA	False	NA	NA	NA	133797970	133797775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133797800_133798000
ES.24628.1	chr4	-	159	1	Intergenic	novelGene_20315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	3815	False	NA	NA	False	NA	NA	NA	133811995	133811836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133811800_133812000
ES.24629.1	chr4	+	2625	1	Antisense	novelGene_ENSMUSG00000000682.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	3566	False	NA	NA	False	NA	NA	NA	133820048	133822673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_133820000_133822700
ES.2463.1	chr10	-	210	1	Intergenic	novelGene_1873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAGTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	23647907	23647697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_23647700_23647900
ES.24630.1	chr4	-	466	2	FSM	ENSMUSG00000000682.8	ENSMUST00000000696.7	514	2	45	3	1	-3	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGGTCCCACGTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	133822348	133820849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133821212_133822244
ES.24631.1	chr4	-	174	1	Intergenic	novelGene_20316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	133827107	133826933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133826900_133827100
ES.24632.1	chr4	+	2724	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	10	9	intron_retention	FALSE	canonical	3	35	junction_2	26.1709126066835	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTCTCCAGAGAGGG	NA	False	NA	24	True	AATAAA	-24	NA	133829903	133854096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.10	chr4	+	2483	10	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	1239	0	intron_retention	FALSE	canonical	2	5	junction_1	32.7067026014811	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133836898	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133836957_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.11	chr4	+	1834	10	NNC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	38.9485257015075	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133839857	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133839921_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133851496_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.12	chr4	+	1742	6	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	3510	0	intron_retention	FALSE	canonical	1	2	junction_1	40.5364033925063	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133843347	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133843469_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.13	chr4	+	776	7	NNC	ENSMUSG00000012126.17	novel	685	3	NA	NA	-5374	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	36.6776498701866	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133845405	133854087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133845473_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.14	chr4	+	1246	8	NNC	ENSMUSG00000012126.17	novel	399	4	NA	NA	-4868	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	33.0583899011604	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133845911	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133846239_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.15	chr4	+	2957	3	FSM	ENSMUSG00000012126.17	ENSMUST00000151407.2	685	3	-2269	-3	189	2	multi-exon	FALSE	canonical	3	96	junction_1	9	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCACAAGGCTCTCCA	NA	False	NA	17	True	AATAAA	-17	NA	133850968	133854089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_133853592_133853676_133853818_133853896
ES.24632.16	chr4	+	5835	1	Genic_Genomic	ENSMUSG00000012126.17	novel	NA	NA	NA	NA	429	4597	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGCCACACGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	133853666	133859501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_133853700_133859500
ES.24632.2	chr4	+	2736	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	10	0	intron_retention	TRUE	canonical	3	43	junction_1	23.4503020591775	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829903	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133829960_133835562_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.3	chr4	+	2419	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	-9	0	intron_retention	FALSE	canonical	1	5	junction_5	31.2235443571389	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829904	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.4	chr4	+	2531	14	NNC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	31.44357207526	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829913	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836804_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.5	chr4	+	2656	12	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	1	7	intron_retention	FALSE	canonical	1	5	junction_5	31.9718367803202	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGCTCTCCAGAGAG	NA	False	NA	22	True	AATAAA	-22	NA	133829914	133854094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.6	chr4	+	1614	15	NNC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.4470936249108	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829916	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836804_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.7	chr4	+	1538	15	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	29.805577481062	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTCACAAGGCTCTCC	NA	False	NA	16	True	AATAAA	-16	NA	133829916	133854088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836957_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24632.8	chr4	+	2407	14	NNC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	5	junction_12	29.7850286048895	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGCTTCACAAGGCTC	NA	False	NA	13	True	AATAAA	-13	NA	133829916	133854085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853731_133853818_133853896
ES.24632.9	chr4	+	1604	14	ISM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	5572	0	-194	0	3prime_fragment	FALSE	canonical	3	35	junction_1	24.5612385247532	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133835465	133854087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ES.24633.1	chr4	+	245	1	Intergenic	novelGene_20321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTGAAAAAAGACTAGA	NA	False	NA	NA	False	AATGAA	-22	NA	133916415	133916660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133916400_133916700
ES.24634.1	chr4	+	181	1	Intergenic	novelGene_20322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	133931539	133931720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133931500_133931700
ES.24635.1	chr4	-	178	1	Intergenic	novelGene_20317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGCAAGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	133832321	133832143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133832100_133832300
ES.24636.1	chr4	-	4898	1	Antisense	novelGene_ENSMUSG00000012126.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTGACCTGGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	133852978	133848080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_133848100_133853000
ES.24637.1	chr4	-	754	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	-6	-5	-6	5	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTCCGGGTCCCTGC	9220	False	NA	0	True	ATTAAA	-27	NA	133856106	133854711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133855118_133855228_133855397_133855926
ES.24637.10	chr4	-	5080	13	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	315	junction_4	47.1298442838741	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914397	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.11	chr4	-	3579	13	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.274016823458	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914340	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879523_133881608_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.12	chr4	-	3876	15	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-23507	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	111.12387370013	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133937930	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253_133914386_133937909
ES.24637.13	chr4	-	3699	13	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	119.580836210862	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914382	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133900123_133900192_133914253
ES.24637.14	chr4	-	3938	15	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	140.299479249037	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914367	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133903922_133904024_133914253
ES.24637.16	chr4	-	3495	5	ISM	ENSMUSG00000037443.14	ENSMUST00000121566.8	3748	14	46618	-7	-1086	-1	3prime_fragment	FALSE	canonical	3	319	junction_4	31.0433165109658	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGGTTTCCTAGTGCCT	7593	False	NA	NA	False	AATAAA	-14	NA	133867674	133857169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145
ES.24637.17	chr4	-	4006	15	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	140.631610955716	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGGTTTCCTAGTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	133914362	133857169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133911635_133911811_133914253
ES.24637.18	chr4	-	4780	16	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	158.404741792101	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGGTTTCCTAGTGCC	NA	False	NA	NA	False	AATAAA	-13	NA	133914374	133857170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133903041_133903158_133903201_133904024_133914253
ES.24637.19	chr4	-	3898	14	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	114.534612736905	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCGGTTTCCTAGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	133914417	133857171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866254_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.20	chr4	-	3802	14	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	108.118497341831	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCGGTTTCCTAGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	133914344	133857171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875928_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.24	chr4	-	7242	13	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	13	3	intron_retention	FALSE	canonical	3	315	junction_4	50.4917485007864	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTCCGGTTTCCTAGT	NA	False	NA	NA	False	AATAAA	-10	NA	133914383	133857173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133858751_133859542_133859769_133861379_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.26	chr4	-	3664	15	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.12387370013	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACACTCCGGTTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	133914384	133857176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858365_133858546_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.27	chr4	-	3698	12	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	123.560337587728	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACACTCCGGTTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	133914381	133857176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133858751_133859542_133859769_133861379_133861488_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.28	chr4	-	3763	14	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	115.105405771709	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACACTCCGGTTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	133914382	133857176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859762_133861453_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.29	chr4	-	3705	14	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-17	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.816344217225	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTGTTAAGTCGACTG	NA	False	NA	NA	False	TATAAA	-13	NA	133914309	133857234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858743_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.3	chr4	-	788	2	FSM	ENSMUSG00000028843.9	ENSMUST00000136408.2	368	2	8	-428	8	1	multi-exon	FALSE	canonical	3	1437	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	9286	False	NA	-11	True	ATTAAA	-16	NA	133856040	133854722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133855397_133855926
ES.24637.30	chr4	-	1281	8	ISM	ENSMUSG00000037443.14	ENSMUST00000121566.8	3748	14	34757	1201	2259	31	3prime_fragment	FALSE	canonical	3	315	junction_5	58.467154567888	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTTTGCAGATTTCAA	8288	False	NA	NA	False	NA	NA	NA	133879535	133858377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414
ES.24637.31	chr4	-	3089	1	Intergenic	novelGene_20318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5556	False	NA	NA	False	NA	NA	NA	133869711	133866622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133866600_133869700
ES.24637.32	chr4	-	4228	9	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	28	15728	1	6659	5prime_fragment	FALSE	canonical	3	365	junction_5	45.0692175991552	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACGACAGAAACATTC	NA	False	NA	NA	False	NA	NA	NA	133914395	133872896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.33	chr4	-	1966	10	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	4	4333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	171.47076200397	385	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTTGTGTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	133914358	133875222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133903922_133904024_133914253
ES.24637.34	chr4	-	1886	9	ISM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	35	18063	8	4324	5prime_fragment	FALSE	canonical	3	365	junction_5	45.0692175991552	385	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTCTAAGAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	133914388	133875231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.35	chr4	-	175	1	Intergenic	novelGene_20319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGTAAATTAAGGA	4011	False	NA	NA	False	NA	NA	NA	133895470	133895295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133895300_133895500
ES.24637.36	chr4	-	181	1	Intergenic	novelGene_20320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGTATGACTGT	NA	False	NA	NA	False	NA	NA	NA	133915821	133915640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133915600_133915800
ES.24637.4	chr4	-	6201	15	Fusion	ENSMUSG00000037443.14_ENSMUSG00000028843.9	novel	3893	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	315	junction_6	295.569572941769	590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	NA	False	NA	-11	True	ATTAAA	-16	NA	133914396	133854722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_133855118_133855228_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24637.5	chr4	-	511	2	FSM	ENSMUSG00000028843.9	ENSMUST00000105879.2	518	2	8	-1	6	1	multi-exon	FALSE	canonical	3	16	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTGTGGTGTC	9284	False	NA	-11	True	ATTAAA	-16	NA	133856042	133854722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133855118_133855926
ES.24637.6	chr4	-	789	3	NNC	ENSMUSG00000028843.9	novel	743	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	761	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACTGCTTGTGGTGT	9274	False	NA	-12	True	ATTAAA	-15	NA	133856052	133854723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133855118_133855228_133855397_133855825
ES.24637.8	chr4	-	4922	14	NNC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	115.31464545157	416	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914309	133857168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133882851_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ES.24638.1	chr4	+	176	1	Intergenic	novelGene_20323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTACAAGTG	2322	False	NA	NA	False	NA	NA	NA	133958961	133959137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_133959000_133959100
ES.24639.1	chr4	-	4867	16	NIC	ENSMUSG00000028841.15	novel	2468	21	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCATGTGTCTTTGCTT	2976	False	NA	NA	False	AATAAA	-18	NA	133965640	133955354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_133955896_133956249_133956432_133956516_133956602_133956692_133956755_133956896_133956974_133957490_133957563_133957722_133959980_133960057_133960165_133960304_133960364_133960450_133960513_133960596_133961239_133961799_133962023_133962419_133962505_133963181_133963364_133963470_133963629_133965567
ES.2464.1	chr10	-	215	1	Intergenic	novelGene_1874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGTTTAAGGAGATA	NA	False	NA	NA	False	NA	NA	NA	23652967	23652752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_23652800_23653000
ES.24640.1	chr4	-	218	1	Intergenic	novelGene_20324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTTCAGGAGGCAGCTG	1783	False	NA	NA	False	NA	NA	NA	133966833	133966615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133966600_133966800
ES.24640.2	chr4	-	175	2	Intergenic	novelGene_20325	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133969819	133966660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_133966805_133969788
ES.24640.3	chr4	-	3086	3	NNC	ENSMUSG00000028840.11	novel	1994	3	NA	NA	8	2123	intron_retention	FALSE	non_canonical	0	0	junction_1	334	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCCTAATACCACTGA	7676	False	NA	NA	False	NA	NA	NA	133972895	133968476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133969302_133970540_133972242_133972335
ES.24640.4	chr4	-	1980	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	-4	18	-4	0	multi-exon	FALSE	canonical	3	614	junction_2	27	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAGTGTGCATGTAT	7664	False	NA	-11	True	NA	NA	NA	133972907	133970617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133972242_133972335_133972399_133972614
ES.24640.5	chr4	-	1964	3	NNC	ENSMUSG00000028840.11	novel	1994	3	NA	NA	-5	0	intron_retention	FALSE	canonical	3	7	junction_2	330.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAGTGTGCATGTAT	7713	False	NA	-11	True	NA	NA	NA	133972858	133970617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_133972242_133972335_133972399_133972581
ES.24640.6	chr4	-	667	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	-2	1329	-2	-1311	multi-exon	FALSE	canonical	3	614	junction_2	27	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTTTCTGGGCCAAGAT	7666	False	NA	2	True	NA	NA	NA	133972905	133971928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133972242_133972335_133972399_133972614
ES.24641.1	chr4	-	2980	1	Genic_Genomic	ENSMUSG00000050105.6	novel	NA	NA	NA	NA	19	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCATGAGTTTGGCT	3433	False	NA	-21	True	AATAAA	-20	NA	133981398	133978418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_133978400_133981400
ES.24641.2	chr4	-	1224	2	FSM	ENSMUSG00000050105.6	ENSMUST00000060050.6	1226	2	0	2	0	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGACCATGAGTTT	3414	False	NA	-25	True	AATAAA	-16	NA	133981417	133978422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_133979570_133981340
ES.24642.1	chr4	+	3836	1	Antisense	novelGene_ENSMUSG00000050890.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCGGCCTCCAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	134010712	134014548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134010700_134014500
ES.24643.1	chr4	-	4557	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	-43	-5	-43	4	multi-exon	FALSE	canonical	3	58	junction_1	10	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTCTCTTGCTACTTT	4248	False	NA	NA	False	AATAAA	-23	NA	134014607	134002308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014471
ES.24643.10	chr4	-	1593	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	-35	2951	-35	591	multi-exon	FALSE	canonical	3	58	junction_1	10	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGTATGTGAATGTGT	4256	False	NA	NA	False	NA	NA	NA	134014599	134005264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014471
ES.24643.11	chr4	-	5703	1	NIC	ENSMUSG00000050890.16	novel	4674	4	NA	NA	-4	2047	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATTTAGGCC	4315	False	NA	NA	False	AAAAAG	-12	NA	134014540	134008837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134008800_134014500
ES.24643.2	chr4	-	4715	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	-29	0	-29	0	multi-exon	FALSE	canonical	3	10	junction_2	24	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	3620	False	NA	NA	False	AATAAA	-19	NA	134015235	134002312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014937
ES.24643.3	chr4	-	4426	2	NNC	ENSMUSG00000050890.16	novel	4686	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	3622	False	NA	NA	False	AATAAA	-19	NA	134015233	134002312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134006428_134014922
ES.24643.4	chr4	-	4322	3	NNC	ENSMUSG00000050890.16	novel	4509	3	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAACCTTGAAAGTT	4314	False	NA	NA	False	AATAAA	-10	NA	134014541	134002321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134006272_134011556_134011859_134014471
ES.24643.5	chr4	-	4239	2	NNC	ENSMUSG00000050890.16	novel	4509	3	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAACCTTGAAAGTT	4273	False	NA	NA	False	AATAAA	-10	NA	134014582	134002321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134006428_134014449
ES.24643.6	chr4	-	4323	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	25	161	-3	-161	multi-exon	FALSE	canonical	3	58	junction_1	10	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCATCAGCACATCAGA	4316	False	NA	NA	False	NA	NA	NA	134014539	134002474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014471
ES.24643.7	chr4	-	3973	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	7	529	4	-529	multi-exon	FALSE	canonical	3	58	junction_1	10	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGCCATGGTTTCT	4298	False	NA	NA	False	NA	NA	NA	134014557	134002842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014471
ES.24643.8	chr4	-	1793	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	75	2818	75	725	multi-exon	FALSE	canonical	3	10	junction_2	24	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTCGTCCCTACTCCT	3724	False	NA	NA	False	GATAAA	-19	NA	134015131	134005130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014937
ES.24643.9	chr4	-	1662	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	25	2822	-3	720	multi-exon	FALSE	canonical	3	58	junction_1	10	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTCATCTTCGTCCCTA	4316	False	NA	NA	False	GATAAA	-14	NA	134014539	134005135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134006428_134011556_134011859_134014471
ES.24644.2	chr4	+	2021	9	FSM	ENSMUSG00000028834.14	ENSMUST00000105875.8	1886	9	-134	-1	-134	1	multi-exon	FALSE	canonical	1	4	junction_7	6.8545149354276	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATGAAAGAAGTGTGAT	NA	False	NA	NA	False	AATAAA	-29	NA	134042296	134056941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050549_134052355_134052379_134052894_134053020_134055015_134055094_134056215
ES.24644.3	chr4	+	1880	8	NNC	ENSMUSG00000028834.14	novel	1886	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.89622712968015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATGAAAGAAGTGTGAT	NA	False	NA	NA	False	AATAAA	-29	NA	134042432	134056941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050567_134052894_134053020_134055015_134055094_134056215
ES.24645.1	chr4	-	154	1	Intergenic	novelGene_20326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	134051210	134051056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134051100_134051200
ES.24646.1	chr4	-	236	1	Intergenic	novelGene_20327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACAGGCTGGGGAGATG	NA	False	NA	NA	False	NA	NA	NA	134051454	134051218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134051200_134051500
ES.24647.1	chr4	+	3806	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-653	0	-628	0	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTTGCAGA	1428	False	NA	16	True	AATAAA	-21	NA	134069863	134081795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.10	chr4	+	3438	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	1	-286	1	286	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGGTTATTATT	2082	False	NA	NA	False	NA	NA	NA	134070517	134082081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.11	chr4	+	1518	9	NNC	ENSMUSG00000028836.15	novel	3153	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.8098975883136	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2083	False	NA	9	True	AATAAA	-14	NA	134070518	134081788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693_134079874_134081499
ES.24647.12	chr4	+	1467	8	NNC	ENSMUSG00000028836.15	novel	3153	8	NA	NA	49	172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.1172753059766	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACGTGACCGGGTTGTCC	2130	False	NA	-77	True	NA	NA	NA	134070565	134080160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134070648_134071318_134071503_134073190_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.13	chr4	+	3302	8	NNC	ENSMUSG00000028836.15	novel	3102	8	NA	NA	-121	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.8937106795314	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTTGCCTTGCA	2220	False	NA	14	True	AATAAA	-19	NA	134070655	134081793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134070938_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.14	chr4	+	3107	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105872.8	3102	8	-6	1	-6	-1	multi-exon	FALSE	canonical	1	1	junction_1	95.9345014654716	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATGAGTGTTTTGC	2335	False	NA	8	True	AATAAA	-13	NA	134070770	134081787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070864_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.15	chr4	+	3404	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	-79	-1302	-79	4	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGCCTTGCAGATATA	2505	False	NA	20	True	AATAAA	-25	NA	134070940	134081799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.16	chr4	+	1600	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	177	246	177	-246	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAGGCTATTTTAT	2761	False	NA	14	True	GATAAA	-26	NA	134071196	134080251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.17	chr4	+	3431	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	189	-1597	189	299	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTGTGTGTCTGTGCA	2773	False	NA	NA	False	TTTAAA	-8	NA	134071208	134082094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.18	chr4	+	2973	6	ISM	ENSMUSG00000028836.15	ENSMUST00000105873.8	1224	7	722	-1800	194	0	3prime_fragment	FALSE	canonical	1	1	junction_1	110.960533524312	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2778	False	NA	9	True	AATAAA	-14	NA	134071213	134081788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134071528_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.19	chr4	+	3253	2	NIC	ENSMUSG00000028836.15	novel	2023	7	NA	NA	5678	-250	intron_retention	FALSE	canonical	3	295	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGATCTGAGGCTATT	8262	False	NA	10	True	GATAAA	-22	NA	134076697	134080247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134079397_134079693
ES.24647.2	chr4	+	1789	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-180	1544	-155	-246	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAGGCTATTTTAT	1901	False	NA	14	True	GATAAA	-26	NA	134070336	134080251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.20	chr4	+	851	3	NNC	ENSMUSG00000028836.15	novel	1224	7	NA	NA	7862	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.5	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAGGCTATTTTAT	NA	False	NA	14	True	GATAAA	-26	NA	134078881	134080251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134079040_134079261_134079397_134079693
ES.24647.21	chr4	+	2354	2	ISM	ENSMUSG00000028836.15	ENSMUST00000105872.8	3102	8	8364	-3	8121	3	3prime_fragment	FALSE	canonical	3	295	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGAGTGTTTTGCCTTG	NA	False	NA	12	True	AATAAA	-17	NA	134079140	134081791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134079397_134079693
ES.24647.3	chr4	+	2133	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-82	1102	-57	196	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTGCAGAGAGGTC	1999	False	NA	NA	False	AATGAA	-5	NA	134070434	134080693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.4	chr4	+	3237	8	NNC	ENSMUSG00000028836.15	novel	3153	8	NA	NA	-57	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	94.3328886314366	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGAGTGTTTTGCCTTG	1999	False	NA	12	True	AATAAA	-17	NA	134070434	134081791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079687
ES.24647.5	chr4	+	3056	7	FSM	ENSMUSG00000028836.15	ENSMUST00000105873.8	1224	7	-32	-1800	-32	0	multi-exon	FALSE	canonical	1	1	junction_2	102.834278763887	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2024	False	NA	9	True	AATAAA	-14	NA	134070459	134081788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134070648_134071318_134071528_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ES.24647.7	chr4	+	3479	7	ISM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	-31	2	-6	-2	intron_retention	FALSE	canonical	3	255	junction_4	9.10585891976516	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTTGCCTTGCA	2050	False	NA	14	True	AATAAA	-19	NA	134070485	134081793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261
ES.24647.8	chr4	+	3155	8	NNC	ENSMUSG00000028836.15	novel	3153	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	91.8934609385527	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGAGTGTTTTGCC	2082	False	NA	9	True	AATAAA	-14	NA	134070517	134081788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079407_134079693
ES.24648.1	chr4	-	1024	1	Antisense	novelGene_ENSMUSG00000028836.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	134071236	134070212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_134070200_134071200
ES.24649.1	chr4	-	7578	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-20	-3432	-20	3432	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGTCCAGCTCCAGG	7003	False	NA	NA	False	AATAAA	-17	NA	134099889	134080250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ES.24649.10	chr4	-	3719	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-24	431	-24	-431	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGCCTCTTGAACTT	6999	False	NA	-1	True	NA	NA	NA	134099893	134084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ES.24649.11	chr4	-	1694	7	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	2654	-595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.6874869954173	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTTGTTTGTTTGT	8590	False	NA	NA	False	NA	NA	NA	134090081	134084277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089865
ES.24649.12	chr4	-	2766	6	ISM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-17	5340	-17	993	5prime_fragment	FALSE	canonical	3	42	junction_3	5.19230199429887	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTGGAGAAATGGCTC	7006	False	NA	NA	False	AATAAA	-15	NA	134099886	134089022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ES.24649.2	chr4	-	7489	10	NIC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	-20	3430	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.2617478902006	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTGAGTCCAGCTCCA	7003	False	NA	NA	False	AATAAA	-15	NA	134099889	134080252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ES.24649.3	chr4	-	4162	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	-25	-11	-25	11	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACGCTTACAGCAGCTG	6998	False	NA	11	True	AATAAA	-34	NA	134099894	134083671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ES.24649.4	chr4	-	3403	12	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	13.8879816048932	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	7003	False	NA	-1	True	AATAAA	-22	NA	134099889	134083683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268_134099050_134099791
ES.24649.5	chr4	-	3560	5	ISM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	10342	1	3208	-1	3prime_fragment	FALSE	canonical	3	37	junction_3	3.53553390593274	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCGGGCTATAAATACGC	9144	False	NA	-1	True	AATAAA	-22	NA	134089527	134083683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842
ES.24649.6	chr4	-	3994	12	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	14.4032824541681	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCGGGCTATAAATACG	7035	False	NA	-2	True	AATAAA	-21	NA	134099857	134083684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268_134099674_134099791
ES.24649.7	chr4	-	3339	14	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.4768125096001	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGCCCGGGCTATAAAT	7009	False	NA	-5	True	AATAAA	-18	NA	134099883	134083687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134090662_134090936_134091077_134091178_134091891_134092000_134092208_134092300_134098268_134098623_134099791
ES.24649.8	chr4	-	2573	11	NIC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	15.1973681932103	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACGCCCGGGCTATAAA	5948	False	NA	-6	True	AATAAA	-17	NA	134092723	134083688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134092669
ES.24649.9	chr4	-	2966	12	NNC	ENSMUSG00000028838.12	novel	4126	11	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	14.4032824541681	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCACGCCCGGGCTATA	7006	False	NA	-8	True	AATAAA	-15	NA	134099886	134083690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268_134098623_134099791
ES.2465.1	chr10	-	2820	1	FSM	ENSMUSG00000070063.3	ENSMUST00000093556.3	129	1	-144	-2547	-144	2547	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTTAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	23661517	23658697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_23658700_23661500
ES.2465.12	chr10	-	187	1	FSM	ENSMUSG00000070063.3	ENSMUST00000093556.3	129	1	-56	-2	-56	2	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGGAAGACTGAATCAAA	NA	False	NA	-6	True	NA	NA	NA	23661429	23661242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_23661200_23661400
ES.2465.2	chr10	-	674	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	-49	-41	-49	41	multi-exon	FALSE	canonical	3	2594	junction_5	774.773670177298	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTGGATTGGAAGTAC	NA	False	NA	-18	True	TATAAA	-21	NA	23663222	23661039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ES.2465.4	chr10	-	495	6	NNC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1703.54308428052	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTTTGCTGGTATA	NA	False	NA	-4	True	AATAAA	-27	NA	23663098	23661081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_23661159_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ES.2465.6	chr10	-	1490	4	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2594	junction_3	461.374757292449	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGTTTGCTGGTAT	NA	False	NA	-5	True	AATAAA	-26	NA	23663098	23661082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_23661172_23661473_23662779_23662891_23662943_23663053
ES.2465.7	chr10	-	646	6	NIC	ENSMUSG00000061983.8	novel	490	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	98	junction_3	1551.61727239677	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGTTTGCTGGTAT	NA	False	NA	-5	True	AATAAA	-26	NA	23663098	23661082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662779_23662891_23662943_23663053
ES.2465.8	chr10	-	633	1	FSM	ENSMUSG00000070063.3	ENSMUST00000093556.3	129	1	-349	-155	-349	155	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTCTTGTTTG	NA	False	NA	-12	True	AATAAA	-19	NA	23661722	23661089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_23661100_23661700
ES.2465.9	chr10	-	1291	5	NIC	ENSMUSG00000061983.8	novel	584	6	NA	NA	-18	3	intron_retention	FALSE	canonical	3	2594	junction_4	786.689066594929	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTGTATTTCTTGT	NA	False	NA	-15	True	AATAAA	-16	NA	23663133	23661092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_23661172_23661473_23661576_23661799_23662779_23662891_23662943_23663053
ES.24650.1	chr4	+	98	1	Intergenic	novelGene_20328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTAGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	134114190	134114288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134114200_134114300
ES.24651.1	chr4	-	184	1	Intergenic	novelGene_20329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAACTTAAAAATCG	9946	False	NA	NA	False	NA	NA	NA	134119661	134119477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134119500_134119700
ES.24652.1	chr4	+	178	1	Intergenic	novelGene_20330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATCTTAAAAAAAAAA	119	False	NA	NA	False	NA	NA	NA	134121970	134122148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134122000_134122100
ES.24653.1	chr4	+	3222	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	-54	-920	-54	-1	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGGCTGGCTTTCTTC	1725	False	NA	19	True	ATTAAA	-21	NA	134123576	134154723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.10	chr4	+	3155	10	NNC	ENSMUSG00000037366.15	novel	875	7	NA	NA	-1271	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.3652920101283	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCGCTGGCTGGC	1014	False	NA	12	True	ATTAAA	-14	NA	134128951	134154716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134129148_134130280_134130416_134131403_134131555_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.11	chr4	+	3963	10	NNC	ENSMUSG00000037366.15	novel	875	7	NA	NA	-1241	-10	intron_retention	FALSE	non_canonical	0	0	junction_1	14.4820024534499	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGAAGTCGCTGGCTG	1044	False	NA	10	True	ATTAAA	-12	NA	134128981	134154714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134129129_134130280_134130416_134131403_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.12	chr4	+	2965	9	NIC	ENSMUSG00000037366.15	novel	3180	11	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	14.6543508897528	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGCTGGCTGGCTTTCT	2342	False	NA	17	True	ATTAAA	-19	NA	134130279	134154721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134130416_134131403_134131555_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.13	chr4	+	3062	10	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	5498	3	-1	-3	3prime_fragment	FALSE	canonical	3	35	junction_3	4.88636298384356	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGCTGGCTGGCTTTCT	2342	False	NA	17	True	ATTAAA	-19	NA	134130279	134154721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.14	chr4	+	8244	7	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	7869	1	2370	-1	3prime_fragment	FALSE	canonical	3	40	junction_6	2.92498812913071	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGGCTGGCTTTCTTC	4713	False	NA	19	True	ATTAAA	-21	NA	134132650	134154723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.15	chr4	+	2452	5	NNC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	13468	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9274932307477	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCGCTGGCTGGCTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	134143748	134154720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134143846_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.16	chr4	+	3922	4	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	19000	8	13501	-8	3prime_fragment	FALSE	canonical	3	40	junction_3	2.86744175568088	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCGCTGGCTGGC	NA	False	NA	12	True	ATTAAA	-14	NA	134143781	134154716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.17	chr4	+	3390	3	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	21271	4	15772	-4	3prime_fragment	FALSE	canonical	3	40	junction_2	3.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCGCTGGCTGGCTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	134146052	134154720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134147351_134149688_134149844_134152783
ES.24653.18	chr4	+	3913	2	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	23085	5	17586	-5	3prime_fragment	FALSE	canonical	3	40	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCGCTGGCTGGCTTT	NA	False	NA	15	True	ATTAAA	-17	NA	134147866	134154719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134149844_134152783
ES.24653.2	chr4	+	3878	10	NNC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	1	junction_6	14.1656862405839	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGCTGGCTGGCTTTCT	1824	False	NA	17	True	ATTAAA	-19	NA	134123675	134154721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134123736_134130280_134130416_134131403_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145357_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.3	chr4	+	2995	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	48	-795	-2	-126	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACATGCTTTCTAATCG	1827	False	NA	NA	False	ATTAAA	-20	NA	134123678	134154598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.4	chr4	+	3014	10	NIC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	13.8171480504087	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCGCTGGCTGGCT	1830	False	NA	13	True	ATTAAA	-15	NA	134123681	134154717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134123736_134130280_134130416_134131403_134131555_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.5	chr4	+	2862	9	NIC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	11.6270159542335	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCGCTGGCTGGCT	1831	False	NA	13	True	ATTAAA	-15	NA	134123682	134154717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134123736_134130280_134130416_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.7	chr4	+	3205	11	NNC	ENSMUSG00000037366.15	novel	875	7	NA	NA	-1296	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.4287119432275	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCGCTGGCTGGC	989	False	NA	12	True	ATTAAA	-14	NA	134128926	134154716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134129148_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149760_134149844_134152783
ES.24653.8	chr4	+	3281	11	NNC	ENSMUSG00000037366.15	novel	875	7	NA	NA	-1290	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.4569684550422	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGCTTTCTTCTTC	995	False	NA	22	True	ATTAAA	-24	NA	134128932	134154726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134129148_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24653.9	chr4	+	3337	11	NNC	ENSMUSG00000037366.15	novel	875	7	NA	NA	-1287	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.1417476898108	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTCGCTGGCTGGC	998	False	NA	12	True	ATTAAA	-14	NA	134128935	134154716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134129129_134130280_134130416_134131403_134131555_134132219_134132414_134138214_134138284_134139077_134139217_134140661_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ES.24654.1	chr4	-	919	2	Intergenic	novelGene_20331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCAGTGCTCTTGTCAT	NA	False	NA	NA	False	AAAAAG	-27	NA	134164104	134160993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134161794_134163985
ES.24654.2	chr4	-	879	2	Intergenic	novelGene_20333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTGTGGCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	134163626	134161025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134161794_134163515
ES.24654.3	chr4	-	880	2	Intergenic	novelGene_20334	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTGTGGCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	134163659	134161025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134161794_134163547
ES.24654.4	chr4	-	743	2	Intergenic	novelGene_20332	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATTGTGGCTTGCAT	NA	False	NA	NA	False	NA	NA	NA	134163617	134161025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134161667_134163515
ES.24655.1	chr4	-	180	1	Intergenic	novelGene_20335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	134166005	134165825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134165800_134166000
ES.24656.1	chr4	+	1733	1	Antisense	novelGene_ENSMUSG00000087343.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGAGGCCTGTTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	134174832	134176565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134174800_134176600
ES.24657.1	chr4	+	1457	4	NIC	ENSMUSG00000028832.12	novel	1060	5	NA	NA	1	-7	intron_retention	FALSE	canonical	3	455	junction_1	267.265577448516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGACTTCTTTCTGTTC	NA	False	NA	4	True	AATAAA	-20	NA	134195717	134201147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134195741_134197413_134198151_134200114_134200307_134200642
ES.24657.2	chr4	+	735	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	93	232	4	-53	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTATTTTTCTCGTTGCA	NA	False	NA	NA	False	TTTAAA	-19	NA	134195723	134200922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ES.24657.3	chr4	+	1140	5	NNC	ENSMUSG00000028832.12	novel	967	4	NA	NA	434	-11	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	434.652159778368	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTCT	NA	False	NA	0	True	AATAAA	-16	NA	134196153	134201143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134196355_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ES.24658.1	chr4	-	2624	1	Intergenic	novelGene_20336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134205365	134202741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134202700_134205400
ES.24659.1	chr4	+	2155	3	FSM	ENSMUSG00000037348.16	ENSMUST00000136171.8	890	3	-2	-1263	-2	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTTGTTTTGACTC	NA	False	NA	15	True	AATAAA	-16	NA	134224283	134236120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134224348_134227910_134227995_134234113
ES.24659.2	chr4	+	2038	2	FSM	ENSMUSG00000037348.16	ENSMUST00000081525.4	2351	2	310	3	3	-3	multi-exon	FALSE	canonical	1	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTTGTTTTGACTCC	NA	False	NA	16	True	AATAAA	-17	NA	134224317	134236121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134224348_134234113
ES.24659.3	chr4	+	5476	2	ISM	ENSMUSG00000037348.16	ENSMUST00000125330.8	650	4	28	1228	5	-948	5prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAATAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	134224319	134233358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134224348_134227910
ES.2466.1	chr10	+	2621	13	NNC	ENSMUSG00000037455.17	novel	916	4	NA	NA	-5216	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	34.4217106876847	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23667667	23703866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23667807_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.10	chr10	+	2781	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	35.8894908790241	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATTCATTGTATTCAT	NA	False	NA	19	True	AATAAA	-12	NA	23672901	23703861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673206_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.11	chr10	+	2691	13	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.7898961533373	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672901	23703866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701815_23701939_23702040_23702094_23702491
ES.2466.12	chr10	+	1833	5	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	47.2460315793824	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGCTATTCATTGTAT	NA	False	NA	15	True	AATAAA	-8	NA	23672901	23703857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23701844_23701939_23702040_23702094_23702491
ES.2466.13	chr10	+	3972	13	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.8564560381833	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672901	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23673082_23674643_23674784_23679659_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23693642_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.14	chr10	+	2656	13	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.6323191763322	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCATTGTATTCATT	NA	False	NA	20	True	AATAAA	-13	NA	23672901	23703862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23673082_23674641_23674784_23679659_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.16	chr10	+	4339	10	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	18	-5	intron_retention	FALSE	canonical	3	15	junction_2	36.7023395493402	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATTCATTGTATTCAT	NA	False	NA	19	True	AATAAA	-12	NA	23672901	23703861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23673082_23674643_23674784_23679659_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583
ES.2466.17	chr10	+	2925	15	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.5510545926754	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672902	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.18	chr10	+	4287	12	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	19	-5	intron_retention	FALSE	canonical	3	35	junction_4	24.1541194748081	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATTCATTGTATTCAT	NA	False	NA	19	True	AATAAA	-12	NA	23672902	23703861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.19	chr10	+	3846	12	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	19	-1	intron_retention	FALSE	canonical	3	35	junction_5	23.812976530448	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672902	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23701939_23702040_23702094_23702491
ES.2466.2	chr10	+	2901	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	-114	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672769	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.21	chr10	+	5512	11	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	20	-1	intron_retention	FALSE	canonical	3	35	junction_5	23.7623652021427	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672903	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23701939_23702040_23702094_23702491
ES.2466.3	chr10	+	2857	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	-21	1	-21	-1	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672862	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.4	chr10	+	1927	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	-5	915	-5	-35	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGGTTTTGAAAGATGG	NA	False	NA	NA	False	TATAAA	-21	NA	23672878	23702951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.5	chr10	+	3077	12	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	35	junction_5	24.0306278399081	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672883	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040
ES.2466.6	chr10	+	3025	15	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	36.0269881831804	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCATTGTATTCATTCA	NA	False	NA	22	True	AATAAA	-15	NA	23672884	23703864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681127_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.7	chr10	+	3557	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_4	36.2884853178893	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTATTCATTGTATTCAT	NA	False	NA	19	True	AATAAA	-12	NA	23672885	23703861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ES.2466.8	chr10	+	4020	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	72	junction_6	15.0911581913237	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATTGTATTCATTCAA	NA	False	NA	23	True	AATAAA	-16	NA	23672885	23703865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23701939_23702040_23702094_23702491
ES.2466.9	chr10	+	6068	11	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	16	-4	intron_retention	FALSE	canonical	3	72	junction_6	14.8421696527159	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCATTGTATTCATT	NA	False	NA	20	True	AATAAA	-13	NA	23672899	23703862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23701939_23702040
ES.24660.1	chr4	+	1270	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	4	1	4	-1	multi-exon	FALSE	canonical	3	435	junction_2	7.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTGGTGTCGTGCTTC	NA	False	NA	19	True	AATAAA	-19	NA	134238313	134251237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134238481_134248782_134248913_134250264
ES.24660.2	chr4	+	4938	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	24	-3687	24	3687	multi-exon	FALSE	canonical	3	435	junction_2	7.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGATCAGGGTCAACCAA	NA	False	NA	NA	False	NA	NA	NA	134238333	134254925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134238481_134248782_134248913_134250264
ES.24660.3	chr4	+	2385	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	24	3687	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	203.032017179557	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGATCAGGGTCAACCAA	NA	False	NA	NA	False	NA	NA	NA	134238333	134254925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134238481_134248782_134248913_134250264_134251057_134253609
ES.24660.4	chr4	+	2616	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	25	4063	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	208.215166487832	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134238334	134255301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134238481_134248782_134248913_134250264_134251057_134253753
ES.24660.5	chr4	+	1200	3	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	224	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTGGTGTCGTGCT	NA	False	NA	17	True	AATAAA	-17	NA	134238336	134251235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134238481_134248782_134248913_134250309
ES.24660.6	chr4	+	2779	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	27	4084	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	203.032017179557	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGGCCCTCTGTAGAG	NA	False	NA	NA	False	NA	NA	NA	134238336	134255322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134238481_134248782_134248913_134250264_134251057_134253609
ES.24660.7	chr4	+	4021	4	NNC	ENSMUSG00000078521.3	novel	1275	3	NA	NA	71	3687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	208.686367547092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGATCAGGGTCAACCAA	NA	False	NA	NA	False	NA	NA	NA	134238380	134254925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134238481_134248782_134248913_134250264_134251057_134251926
ES.24660.8	chr4	+	7427	1	Antisense	novelGene_ENSMUSG00000046671.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGGCAACTGGCAAGAT	4994	False	NA	NA	False	NA	NA	NA	134251949	134259376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134251900_134259400
ES.24660.9	chr4	+	2874	1	Antisense	novelGene_ENSMUSG00000046671.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTAGGACCCAGCCT	9971	False	NA	NA	False	NA	NA	NA	134256926	134259800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134256900_134259800
ES.24661.1	chr4	-	1917	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	52	0	-37	0	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTTGGTTCATC	NA	False	NA	0	True	ATTAAA	-23	NA	134262646	134252867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.10	chr4	-	1995	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262387	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
ES.24661.11	chr4	-	1894	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	178.015604809117	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262570	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262499
ES.24661.12	chr4	-	1798	7	NNC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	200.422609059513	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262577	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259979_134260064_134262560
ES.24661.13	chr4	-	2057	6	NIC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	7	-2	intron_retention	FALSE	canonical	3	259	junction_5	107.800927639794	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262602	134252876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134253824_134256399_134256722_134257585_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.14	chr4	-	1896	8	NNC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	234.803782606947	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTGAATTTTTTTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	134262577	134252876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256722_134257340_134257398_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.16	chr4	-	1383	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	39	547	39	-540	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTCTCCATAATTGG	NA	False	NA	-1	True	AATGAA	-19	NA	134262659	134253414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.17	chr4	-	1458	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	12	555	2	-541	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262567	134253415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ES.24661.18	chr4	-	5523	4	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	8	555	-2	-541	intron_retention	FALSE	canonical	3	505	junction_1	18.8325958557674	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262571	134253415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990
ES.24661.19	chr4	-	1147	7	NNC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	5	-543	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	199.902267787703	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATTAGTCTCCATAAT	NA	False	NA	-4	True	AATGAA	-16	NA	134262604	134253417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256544_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.2	chr4	-	2038	8	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.23310308939	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTTGGTTCATC	NA	False	NA	0	True	ATTAAA	-23	NA	134262542	134252867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256722_134257340_134257398_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ES.24661.20	chr4	-	3787	6	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	10	557	0	-543	intron_retention	FALSE	canonical	3	505	junction_1	21.3297913726318	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATTAGTCTCCATAAT	NA	False	NA	-4	True	AATGAA	-16	NA	134262569	134253417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ES.24661.21	chr4	-	2142	5	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	2290	-548	intron_retention	FALSE	canonical	3	505	junction_1	23.6959912221456	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGCATTAGTCTCC	NA	False	NA	-9	True	AATGAA	-11	NA	134260065	134253422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134253824_134256399_134257798_134257990_134258101_134259454_134259560_134259937
ES.24661.22	chr4	-	1029	6	NNC	ENSMUSG00000046671.19	novel	1014	6	NA	NA	2290	974	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	214.702584986767	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTGCCTCTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	134260065	134254721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134254874_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ES.24661.23	chr4	-	1607	6	FSM	ENSMUSG00000046671.19	ENSMUST00000146808.2	925	6	86	-768	-3	-24	multi-exon	FALSE	canonical	3	259	junction_5	112.150969679268	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATAAATCTGGCTGCT	NA	False	NA	NA	False	TATAAA	-16	NA	134262612	134255719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24661.3	chr4	-	4470	3	ISM	ENSMUSG00000046671.19	ENSMUST00000130187.8	4085	5	4170	-2823	3956	2	3prime_fragment	FALSE	canonical	3	525	junction_1	13	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	-5	True	ATTAAA	-18	NA	134258399	134252872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134256722_134257585_134257798_134257990
ES.24661.4	chr4	-	4471	5	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	54	2	intron_retention	FALSE	canonical	3	505	junction_1	20.6942020865749	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	-5	True	ATTAAA	-18	NA	134262515	134252872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134253824_134256399_134256722_134257585_134258101_134259454_134259560_134259937
ES.24661.5	chr4	-	4331	6	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	11	12	1	2	intron_retention	FALSE	canonical	3	505	junction_1	21.3297913726318	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAATTTTTTTCTTGGT	NA	False	NA	-5	True	ATTAAA	-18	NA	134262568	134252872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ES.24661.7	chr4	-	1999	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	11	15	1	-1	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262568	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ES.24661.8	chr4	-	1925	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	197.660834652582	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262417	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262315
ES.24661.9	chr4	-	2714	6	NIC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	259	junction_5	110.845117168056	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	False	NA	-8	True	ATTAAA	-15	NA	134262587	134252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134253824_134256399_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ES.24662.1	chr4	-	3472	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	-28	1	-28	-1	multi-exon	FALSE	canonical	3	9	junction_3	3.13603423830188	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGTGCTTTTCCTTTG	8341	False	NA	0	True	AATAAA	-18	NA	134279505	134265203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ES.24662.3	chr4	-	199	1	Intergenic	novelGene_20337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	134268883	134268684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134268700_134268900
ES.24663.2	chr4	-	4090	13	NNC	ENSMUSG00000037306.14	novel	4285	13	NA	NA	-62	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	11.2792828771258	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGTATAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	134431663	134289000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255_134430921_134431607
ES.24663.3	chr4	-	4676	12	NNC	ENSMUSG00000037306.14	novel	4715	12	NA	NA	13	0	intron_retention	TRUE	canonical	0	0	junction_1	11.6448832448043	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGTATAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	134431588	134289000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134291118_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ES.24663.4	chr4	-	3434	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	-30	1311	-30	-1311	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGACTCATTGGCCACC	NA	False	NA	NA	False	AATAAA	-24	NA	134431631	134290311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ES.24663.5	chr4	-	3534	13	NNC	ENSMUSG00000037306.14	novel	4285	13	NA	NA	-1	-1314	intron_retention	FALSE	canonical	0	0	junction_10	13.9552857369529	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTGGACTCATTGGCC	NA	False	NA	NA	False	AATAAA	-21	NA	134431602	134290314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134325420_134325553_134367597_134367695_134430255
ES.24663.6	chr4	-	3492	13	NNC	ENSMUSG00000037306.14	novel	4285	13	NA	NA	-11	-1314	intron_retention	FALSE	canonical	0	0	junction_3	12.49749974995	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTGGACTCATTGGCC	NA	False	NA	NA	False	AATAAA	-21	NA	134431612	134290314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134291144_134291815_134291932_134293138_134293312_134293741_134293822_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ES.24664.1	chr4	-	193	1	Intergenic	novelGene_20338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	134446597	134446404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134446400_134446600
ES.24665.1	chr4	-	7552	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	66	-1069	66	1069	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATAAAGAGCACCTGC	NA	False	NA	NA	False	TTTAAA	-5	NA	134495269	134467795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.2	chr4	-	6534	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	15	0	15	0	multi-exon	FALSE	canonical	3	50	junction_1	8.8175960442742	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	134495320	134468864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.3	chr4	-	3189	7	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	10386	3193	-6788	1829	3prime_fragment	FALSE	canonical	3	50	junction_1	9.58152156786987	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTCAGAGCAAAAGGTC	NA	False	NA	NA	False	AATACA	-19	NA	134484949	134472057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651
ES.24665.4	chr4	-	2700	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	-9	3858	-9	1164	multi-exon	FALSE	canonical	3	50	junction_1	8.8175960442742	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAGTATTGCTGGTAA	NA	False	NA	-1	True	AATAAA	-26	NA	134495344	134472722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.5	chr4	-	2685	9	NNC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	4	1156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.5166604983954	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATCACTTGGAGTATT	NA	False	NA	-9	True	AATAAA	-18	NA	134495331	134472730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482497_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.6	chr4	-	2655	9	NNC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	32	1154	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	22.2808774513034	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCATCACTTGGAGTA	NA	False	NA	-11	True	AATAAA	-16	NA	134495303	134472732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495120
ES.24665.7	chr4	-	3730	8	NIC	ENSMUSG00000037295.8	novel	6549	9	NA	NA	25	1146	intron_retention	FALSE	canonical	3	53	junction_1	7.68778516975641	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTGTGAGCATCAC	NA	False	NA	-19	True	AATAAA	-8	NA	134495310	134472740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.8	chr4	-	1269	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	78	5202	78	-180	multi-exon	FALSE	canonical	3	50	junction_1	8.8175960442742	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGTTGATGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	134495257	134474066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ES.24665.9	chr4	-	191	1	Intergenic	novelGene_20339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134485575	134485384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134485400_134485600
ES.24666.1	chr4	-	174	1	Intergenic	novelGene_20340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAGGAGGAGAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	134498422	134498248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134498200_134498400
ES.24667.1	chr4	+	177	1	Intergenic	novelGene_20341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	134521550	134521727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134521600_134521700
ES.24668.1	chr4	+	200	1	Intergenic	novelGene_20342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACTGTACCATGTA	8704	False	NA	NA	False	NA	NA	NA	134557068	134557268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134557100_134557300
ES.24669.10	chr4	-	3760	11	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	62.1835991238847	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTAGTTTCCTGCCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134580607	134530073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580361
ES.24669.11	chr4	-	3852	11	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	62.3583194128899	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTAGTTTCCTGCCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134580659	134530073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555847_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ES.24669.13	chr4	-	3817	12	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-608	-6	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_11	55.9266047956332	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTAGTTTCCTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	134581264	134530075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348_134580605_134581215
ES.24669.15	chr4	-	3673	12	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-585	-127	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_11	55.9266047956332	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGATGAGGTTTCCC	NA	False	NA	NA	False	AAAACA	-14	NA	134581241	134530196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348_134580605_134581215
ES.24669.16	chr4	-	2654	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	43	1129	15	-1129	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAAGAGGGATCGGCC	NA	False	NA	NA	False	ATTAAA	-19	NA	134580613	134531198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ES.24669.17	chr4	-	2575	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	-23	1274	-23	-1274	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTATTTTGTTCTTAAA	NA	False	NA	57	True	AAAAAG	-20	NA	134580679	134531343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ES.24669.18	chr4	-	3760	8	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	16188	-1349	intron_retention	FALSE	canonical	3	158	junction_7	25.7895723271311	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATTTTGCCTTTTTATG	NA	False	NA	-18	True	ATTAAA	-22	NA	134564272	134531418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633
ES.24669.19	chr4	-	2271	10	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-2	-1350	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	65.6742804384724	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTTTGCCTTTTTAT	NA	False	NA	-19	True	ATTAAA	-21	NA	134580630	134531419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ES.24669.2	chr4	-	3667	10	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	63.9318696005152	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580624	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134565159_134565302_134580348
ES.24669.20	chr4	-	4241	4	ISM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	38717	1354	-3415	-1354	intron_retention	FALSE	canonical	3	186	junction_2	18.6964048831735	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCCAATTTTGCCTTT	6282	False	NA	-23	True	ATTAAA	-17	NA	134541939	134531423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446
ES.24669.21	chr4	-	2272	11	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-945	-1354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	62.1835991238847	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCCAATTTTGCCTTT	NA	False	NA	-23	True	ATTAAA	-17	NA	134581601	134531423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134581493
ES.24669.22	chr4	-	3833	10	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	10	-1354	intron_retention	FALSE	canonical	3	158	junction_8	23.6397865086138	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCCAATTTTGCCTTT	NA	False	NA	-23	True	ATTAAA	-17	NA	134580618	134531423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134565302_134580348
ES.24669.23	chr4	-	2341	11	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	7	-1447	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	60.6857479149759	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATCAGTTGTTCTTGGA	NA	False	NA	-116	True	TTTAAA	-34	NA	134580621	134531516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555817_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ES.24669.3	chr4	-	3514	9	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_8	62.8743787245647	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580613	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134580348
ES.24669.4	chr4	-	4106	12	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	71.6409781624045	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580668	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134580348
ES.24669.7	chr4	-	5831	10	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-606	0	intron_retention	FALSE	canonical	3	158	junction_8	23.6397865086138	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134581262	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134565302_134580348
ES.24669.8	chr4	-	3933	12	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	73.5085310166882	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580668	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564250_134564346_134565159_134565302_134580348
ES.24669.9	chr4	-	3872	12	NNC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	-923	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	84.3557990089969	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134581579	134530069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134581493
ES.2467.1	chr10	-	172	1	Intergenic	novelGene_1875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	23690529	23690357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_23690400_23690500
ES.24670.1	chr4	-	176	1	Intergenic	novelGene_20343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	134605204	134605028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134605000_134605200
ES.24671.1	chr4	+	1277	9	NNC	ENSMUSG00000028825.8	novel	701	5	NA	NA	-236	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.16145667145271	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAAGGTCTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	134606884	134623482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134607046_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ES.24671.2	chr4	+	1432	8	ISM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	15038	1	-236	-1	3prime_fragment	FALSE	canonical	3	9	junction_1	5.80288457473997	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAAGGTCTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	134606884	134623482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ES.24671.3	chr4	+	1004	8	NNC	ENSMUSG00000028825.8	novel	1514	10	NA	NA	3696	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.23630588879976	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAAGGTCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	134610816	134623481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134610857_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ES.24671.4	chr4	+	1014	8	NNC	ENSMUSG00000028825.8	novel	1514	10	NA	NA	3756	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.95295054191449	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAAGGTCTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	134610876	134623482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134610989_134611324_134611425_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ES.24671.5	chr4	+	1017	8	NNC	ENSMUSG00000028825.8	novel	1514	10	NA	NA	3815	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.23630588879976	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAAGGTCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	134610935	134623481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134610989_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ES.24671.6	chr4	+	263	1	Intergenic	novelGene_20344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGCCCAAATTATCACT	NA	False	NA	NA	False	NA	NA	NA	134614864	134615127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134614900_134615100
ES.24671.7	chr4	+	157	1	Intergenic	novelGene_20345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	134614867	134615024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134614900_134615000
ES.24672.1	chr4	+	150	1	Intergenic	novelGene_20346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGTAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134638074	134638224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134638100_134638200
ES.24673.1	chr4	-	2152	2	Antisense	novelGene_ENSMUSG00000028825.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGAGCTGCCATGCA	NA	False	NA	NA	False	NA	NA	NA	134624727	134622529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_134624647_134624692
ES.24673.2	chr4	-	3468	6	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	1	2337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	269.910059093766	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGCTTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	134642325	134622822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134625786_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ES.24673.3	chr4	-	1202	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	5	-3	-4	3	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCGTTATACCTTATA	NA	False	NA	-17	True	ATTAAA	-22	NA	134642330	134625156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ES.24673.4	chr4	-	1115	8	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.444071662083	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTTTCTCGTTATAC	NA	False	NA	-23	True	ATTAAA	-16	NA	134642299	134625162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134625620_134625669_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ES.24673.5	chr4	-	1252	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	6	-539	6	-3	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTTTCTCGTTATAC	NA	False	NA	-23	True	ATTAAA	-16	NA	134642320	134625162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
ES.24673.6	chr4	-	1145	7	NNC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	239.191287931275	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTTTCTCGTTATAC	NA	False	NA	-23	True	ATTAAA	-16	NA	134642307	134625162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640479_134642199
ES.24673.7	chr4	-	1062	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	21	-364	21	-178	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134642305	134625337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
ES.24673.8	chr4	-	2792	1	NIC	ENSMUSG00000028822.12	novel	1204	7	NA	NA	75	-13758	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAGGATTAACGAGA	NA	False	NA	NA	False	NA	NA	NA	134642251	134639459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134639500_134642300
ES.24674.1	chr4	+	1501	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	-46	294	-46	5	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTTGAATGTGTCTG	NA	False	NA	26	True	AATAAA	-26	NA	134650856	134654688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
ES.24674.10	chr4	+	3667	2	NIC	ENSMUSG00000037266.19	novel	734	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	913	junction_1	0	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650904	134654683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134654130_134654241
ES.24674.11	chr4	+	2141	5	NIC	ENSMUSG00000037266.19	novel	1749	5	NA	NA	-3	4	intron_retention	FALSE	canonical	3	56	junction_3	350.79659348403	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATGTTGAATGTGTCT	NA	False	NA	25	True	AATAAA	-25	NA	134650933	134654687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134653462_134654045_134654130_134654241
ES.24674.12	chr4	+	3528	3	NIC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	860	junction_1	26.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATGGATGTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	134650933	134654680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134654130_134654241
ES.24674.13	chr4	+	2831	3	ISM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-20	0	-1	0	intron_retention	FALSE	canonical	3	813	junction_2	23.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650935	134654683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134651079_134651185_134651794_134652603
ES.24674.14	chr4	+	2627	5	NNC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_3	374.929660069726	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATGGATGTTGAA	NA	False	NA	18	True	AATAAA	-18	NA	134650935	134654680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651185_134651794_134652603_134652744_134652832_134654130_134654241
ES.24674.15	chr4	+	2125	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650935	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
ES.24674.16	chr4	+	2379	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	5	intron_retention	FALSE	canonical	3	141	junction_3	314.200075588788	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTTGAATGTGTCTG	NA	False	NA	26	True	AATAAA	-26	NA	134650936	134654688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134654130_134654241
ES.24674.17	chr4	+	1452	6	NNC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	423.475808045749	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651185_134651794_134652603_134652738_134653336_134653381_134654045_134654130_134654241
ES.24674.18	chr4	+	1462	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	2	intron_retention	FALSE	canonical	3	31	junction_4	383.058011272444	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGATGTTGAATGTGT	NA	False	NA	23	True	AATAAA	-23	NA	134650937	134654685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134654045_134654130_134654241
ES.24674.19	chr4	+	2823	3	NIC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	813	junction_1	50	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651794_134652603_134654130_134654241
ES.24674.2	chr4	+	2800	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	-43	294	-43	5	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTTGAATGTGTCTG	NA	False	NA	26	True	AATAAA	-26	NA	134650859	134654688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
ES.24674.20	chr4	+	2736	4	NNC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	408.865367680963	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651165_134651794_134652603_134654130_134654241
ES.24674.21	chr4	+	2479	4	NIC	ENSMUSG00000037266.19	novel	734	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	141	junction_2	342.793750753358	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651794_134652603_134652744_134653087_134654130_134654241
ES.24674.23	chr4	+	2512	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	46	junction_3	355.1049140747	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134653133_134653336_134654130_134654241
ES.24674.25	chr4	+	1590	7	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	5	intron_retention	FALSE	canonical	3	46	junction_4	392.724988594648	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTTGAATGTGTCTG	NA	False	NA	26	True	AATAAA	-26	NA	134650937	134654688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134653462_134654045_134654130_134654241
ES.24674.26	chr4	+	2415	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	-8	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGCATTAGTTGTG	NA	False	NA	1	True	NA	NA	NA	134650937	134654974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
ES.24674.27	chr4	+	1788	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	56	junction_4	376.334213166967	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653462_134654045_134654130_134654241
ES.24674.28	chr4	+	2343	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	35	673	1	45	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAGATAAGAAAAAAA	NA	False	NA	NA	False	ACTAAA	-33	NA	134650937	134654309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
ES.24674.29	chr4	+	2168	6	FSM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-18	1	1	-1	multi-exon	FALSE	canonical	3	46	junction_4	379.006385170488	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650937	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134654130_134654241
ES.24674.3	chr4	+	1975	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	46	junction_3	398.577771582912	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650890	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134653133_134653336_134653462_134654045_134654130_134654241
ES.24674.30	chr4	+	738	2	ISM	ENSMUSG00000037266.19	ENSMUST00000151178.2	618	4	1	862	1	-862	intron_retention	FALSE	canonical	3	860	junction_1	0	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGAAAGGTGCGTTTT	NA	False	NA	NA	False	NA	NA	NA	134650937	134651782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134651079_134651185
ES.24674.31	chr4	+	3746	1	NIC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650937	134654683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134650900_134654700
ES.24674.32	chr4	+	2778	6	NNC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	2	40116	intron_retention	FALSE	non_canonical	0	0	junction_4	423.475808045749	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAATAAAGAAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	134650938	134695098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241_134654683_134666461_134666494_134695067
ES.24674.33	chr4	+	2605	4	NNC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	3	-1	intron_retention	FALSE	canonical	1	12	junction_1	403.237178620997	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650939	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651294_134651794_134652603_134654130_134654241
ES.24674.34	chr4	+	1321	4	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	235	300	182	-1	3prime_fragment	FALSE	canonical	3	162	junction_2	332.9667984783	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134651137	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134651794_134652603_134652744_134654045_134654130_134654241
ES.24674.35	chr4	+	1665	5	FSM	ENSMUSG00000037266.19	ENSMUST00000154837.8	734	5	-633	-298	182	-1	multi-exon	FALSE	canonical	3	31	junction_3	392.039219976777	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTAGTTGTGAATGGTA	NA	False	NA	8	True	NA	NA	NA	134651137	134654981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651794_134652603_134652744_134653087_134653133_134654045_134654130_134654241
ES.24674.36	chr4	+	1362	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	4	3	0	-3	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTGTCTGTAACTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	134658212	134664856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ES.24674.37	chr4	+	1020	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	55	294	51	-294	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTATTTTTCTATGTA	NA	False	NA	109	True	TATAAA	-5	NA	134658263	134664565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ES.24674.39	chr4	+	4082	6	NIC	ENSMUSG00000028821.9	novel	1369	7	NA	NA	-33	-379	intron_retention	FALSE	canonical	3	670	junction_4	36.5874295352926	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCACATTTTTGTGC	NA	False	NA	24	True	AATAAA	-30	NA	134658287	134664480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134658330_134658490_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ES.24674.4	chr4	+	3063	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	-12	0	-12	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTTGTGAATGGTAG	NA	False	NA	9	True	NA	NA	NA	134650890	134654982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
ES.24674.40	chr4	+	1626	6	NIC	ENSMUSG00000028821.9	novel	1369	7	NA	NA	-28	-9	intron_retention	FALSE	canonical	3	670	junction_4	33.3550595862157	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCGAACAGTGTCTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	134658292	134664850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134658330_134658490_134658596_134661766_134662361_134662684_134662776_134663293_134663393_134664150
ES.24674.41	chr4	+	1241	6	NIC	ENSMUSG00000028821.9	novel	1369	7	NA	NA	-26	-392	intron_retention	FALSE	canonical	3	670	junction_4	33.3550595862157	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCACATGCATATGTT	NA	False	NA	11	True	AATAAA	-17	NA	134658294	134664467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134658330_134658490_134658596_134661766_134662361_134662684_134662776_134663293_134663393_134664150
ES.24674.5	chr4	+	1758	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	-12	3	-12	-3	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCATTAGTTGTGAATGG	NA	False	NA	6	True	NA	NA	NA	134650890	134654979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
ES.24674.6	chr4	+	3860	3	NIC	ENSMUSG00000037266.19	novel	3051	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	860	junction_1	26.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTAGTTGTGAATGGT	NA	False	NA	7	True	NA	NA	NA	134650901	134654980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134654130_134654241
ES.24674.7	chr4	+	1572	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	19	junction_3	405.32722583118	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650904	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134653462_134654045_134654130_134654241
ES.24674.8	chr4	+	2084	5	NNC	ENSMUSG00000037266.19	novel	1749	5	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	374.929660069726	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATGTTGAATG	NA	False	NA	20	True	AATAAA	-20	NA	134650904	134654682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_134651079_134651185_134651794_134652603_134653381_134654045_134654130_134654241
ES.24674.9	chr4	+	3670	2	ISM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	-51	2	1	-2	intron_retention	FALSE	canonical	3	860	junction_1	0	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTATGGATGTTGAAT	NA	False	NA	19	True	AATAAA	-19	NA	134650904	134654681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_134651079_134651185
ES.24675.1	chr4	-	3723	1	Antisense	novelGene_ENSMUSG00000037266.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTATCTGAGTCTGTGGT	9968	False	NA	NA	False	NA	NA	NA	134651619	134647896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_134647900_134651600
ES.24675.2	chr4	-	177	1	Intergenic	novelGene_20347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	134649629	134649452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134649500_134649600
ES.24676.1	chr4	-	2642	2	Intergenic	novelGene_20348	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCAAACGCTGCTTCAA	7510	False	NA	NA	False	NA	NA	NA	134696755	134693806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134694089_134694395
ES.24677.1	chr4	+	573	3	Intergenic	novelGene_20349	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAATAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134697545	134710969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134697650_134701540_134701704_134710663
ES.24677.2	chr4	+	4027	3	Intergenic	novelGene_20350	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAATAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134699890	134710969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134700315_134700509_134701328_134708184
ES.24678.1	chr4	+	3710	5	FSM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	-46	-1809	-46	0	multi-exon	FALSE	canonical	1	2	junction_2	2.04633819296811	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGCTTCTGGAGTTGTG	6116	False	NA	NA	False	AATATA	-23	NA	134879760	134905301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ES.24679.1	chr4	+	185	1	Intergenic	novelGene_20351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTATC	1920	False	NA	NA	False	NA	NA	NA	134928636	134928821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134928600_134928800
ES.2468.1	chr10	-	543	1	Antisense	novelGene_ENSMUSG00000037455.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCTCAGGTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	23692332	23691789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_23691800_23692300
ES.24680.1	chr4	+	1196	5	Antisense	novelGene_ENSMUSG00000037242.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAGAACACATTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	134942628	134959284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134942715_134944342_134944419_134952205_134952295_134954214_134954333_134958457
ES.24680.2	chr4	+	156	1	Intergenic	novelGene_20352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAAAATC	NA	False	NA	NA	False	NA	NA	NA	134954949	134955105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_134954900_134955100
ES.24681.1	chr4	+	3609	1	Antisense	novelGene_ENSMUSG00000037242.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134963694	134967303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_134963700_134967300
ES.24682.1	chr4	-	4336	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	-154	-63	-154	63	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGATTCGGTTCAGT	NA	False	NA	63	True	TATAAA	-16	NA	135000279	134941216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.10	chr4	-	3541	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	517.136802231501	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATTCTTTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	135000073	134941281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134942447_134942970_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.11	chr4	-	2469	2	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	56257	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	134943868	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134941716_134941832
ES.24682.12	chr4	-	4238	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	633.715498732147	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135000117	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134996410_134996541_134999828
ES.24682.14	chr4	-	7326	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	556.477133402622	1410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135000073	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134949263_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.15	chr4	-	5306	5	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	-3	intron_retention	FALSE	canonical	3	1314	junction_2	72.1959140118054	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135000073	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.16	chr4	-	3471	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_1	505.318628853782	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135000122	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134943767_134944408_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.18	chr4	-	3338	3	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	54215	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	649.5	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	134945910	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134942474_134942521_134944577_134945818
ES.24682.19	chr4	-	4426	8	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	665.063354355149	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135000073	134941282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134988778_134989098_134989836_134989880_134999828
ES.24682.2	chr4	-	3896	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	19378	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	538.208509780364	1391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	134980747	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134980673
ES.24682.20	chr4	-	4630	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	19429	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	538.208509780364	1391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATTCTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	134980696	134941284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134979883
ES.24682.21	chr4	-	4147	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	561.127935501343	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATTCTTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	135000076	134941284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945736_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.22	chr4	-	4222	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	633.715498732147	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAGGATTCTTTTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	135000075	134941285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134989836_134989996_134999828
ES.24682.24	chr4	-	3792	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	51	276	51	-276	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGAGAGCGTTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	135000074	134941555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.25	chr4	-	3648	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	52	419	52	-419	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTTAGGAAATATCTAC	NA	False	NA	NA	False	TTTAAA	-11	NA	135000073	134941698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.26	chr4	-	3523	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	4	592	4	-592	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTAGCTTTCGTAGCA	NA	False	NA	NA	False	AATACA	-16	NA	135000121	134941871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.27	chr4	-	2652	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	-3	1470	-3	-1470	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCATGGCAGCTC	NA	False	NA	-6	True	AATAAA	-19	NA	135000128	134942749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.29	chr4	-	2676	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	51	-1474	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	561.127935501343	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTCTGACTCATGGCA	NA	False	NA	-10	True	AATAAA	-15	NA	135000074	134942753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945736_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.3	chr4	-	4061	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	557.269988425718	1410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000075	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134945993_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.30	chr4	-	2550	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	-7	1576	-7	-1576	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTCTTAAAGTCGTC	NA	False	NA	-112	True	AAGAAA	-1	NA	135000132	134942855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.31	chr4	-	1844	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	51	-1582	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_1	505.318628853782	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGCTCTTTCTTAAA	NA	False	NA	NA	False	TTTAAA	-10	NA	135000074	134942861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134943767_134944408_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.32	chr4	-	1557	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	2562	0	-2562	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTCATTTGTATAA	NA	False	NA	89	True	NA	NA	NA	135000125	134943841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.33	chr4	-	1369	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	74	2676	74	-2676	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTACTACTGTGTCAGA	NA	False	NA	-25	True	NA	NA	NA	135000051	134943955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24682.34	chr4	-	155	2	NNC	ENSMUSG00000037242.9	novel	3093	3	NA	NA	46981	-3797	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAATAAATCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134953144	134945076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134945182_134953094
ES.24682.35	chr4	-	178	1	ISM	ENSMUSG00000037242.9	ENSMUST00000143370.2	3093	3	46980	2193	46980	-2193	mono-exon	FALSE	NA	NA	NA	NA	NA	1209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134953145	134952967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_134953000_134953100
ES.24682.36	chr4	-	176	1	Intergenic	novelGene_20353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	134976361	134976185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_134976200_134976400
ES.24682.37	chr4	-	1003	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	11	-48337	mono-exon	FALSE	NA	NA	NA	NA	NA	1181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGAAAAGAAGGGTGGATG	NA	False	NA	NA	False	NA	NA	NA	135000114	134999111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134999100_135000100
ES.24682.4	chr4	-	4199	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	633.480180344175	1410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000073	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134966934_134967067_134999828
ES.24682.5	chr4	-	3958	5	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	569.910738624918	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000074	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134999828
ES.24682.6	chr4	-	4111	6	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	552.345326765783	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000075	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953503_134966172_134966283_134999828
ES.24682.7	chr4	-	3296	3	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	54251	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	649.5	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	134945874	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134942096_134942152_134944577_134945818
ES.24682.9	chr4	-	4141	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	653.943783686505	1410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000075	134941279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_134944577_134945818_134946001_134949190_134949263_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ES.24683.1	chr4	-	170	2	Intergenic	novelGene_20354	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	135017536	135012584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135012592_135017373
ES.24683.2	chr4	-	158	1	Intergenic	novelGene_20355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135012754	135012596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135012600_135012800
ES.24684.1	chr4	-	178	1	Intergenic	novelGene_20356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGGTAGGAGA	NA	False	NA	NA	False	NA	NA	NA	135031524	135031346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135031300_135031500
ES.24685.1	chr4	+	1368	2	Antisense	novelGene_ENSMUSG00000028809.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAACTAGTCATAACTA	NA	False	NA	NA	False	NA	NA	NA	135051240	135053317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_135051420_135052128
ES.24686.1	chr4	+	172	1	Intergenic	novelGene_20358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGAAATATAT	NA	False	NA	NA	False	NA	NA	NA	135055024	135055196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135055000_135055200
ES.24687.1	chr4	-	3811	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-6	16041	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.011533508551	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGGCCAAGCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	135080561	135031753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135031797_135047794_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.10	chr4	-	3942	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_16	359.875887384787	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080605	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.100	chr4	-	3234	15	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-2102	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	468.560632497578	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	1641	False	NA	-7	True	AATAAA	-12	NA	135071931	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065120_135065390_135067813_135067919_135068157_135068347_135069680_135069795_135071174_135071291_135071809
ES.24687.102	chr4	-	3964	20	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	435.013643241329	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080491	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135072645_135072789_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.104	chr4	-	3357	17	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	415.495708273563	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059552_135065252_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071842_135074425_135074516_135080407
ES.24687.105	chr4	-	5428	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_14	369.883089637794	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080554	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073697_135074045_135074169_135074425_135074516_135080407
ES.24687.107	chr4	-	3448	16	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	373.965773834986	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080484	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071927_135074442_135074516_135080407
ES.24687.109	chr4	-	3570	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	409.528778072072	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080442	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.11	chr4	-	5513	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-17	0	intron_retention	FALSE	canonical	3	160	junction_14	341.999269005067	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080572	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.110	chr4	-	3683	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	334.306222674708	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080476	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059461_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.112	chr4	-	3672	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	389.421521114674	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080476	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068352_135069686_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.115	chr4	-	3472	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	338.314382037994	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080476	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.116	chr4	-	4984	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	426.006634154622	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135074823	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135072645_135073757_135074045_135074169_135074425
ES.24687.117	chr4	-	6603	15	NIC	ENSMUSG00000028809.17	novel	2940	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	940	junction_3	114.201955914485	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080461	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135049811_135051224_135051421_135052129_135052592_135054402_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.122	chr4	-	3860	20	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	435.9437242901	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080470	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135072645_135072706_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.123	chr4	-	3545	16	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	318.466575954212	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080512	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135056676_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.126	chr4	-	3486	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	406.092298643179	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080512	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059552_135065252_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.127	chr4	-	5414	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	7	junction_9	475.641850082783	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080442	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065859_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.128	chr4	-	2218	10	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	400.426377690853	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080451	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052274_135069724_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.13	chr4	-	6256	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-14	0	intron_retention	FALSE	canonical	3	12	junction_10	336.906092025285	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080476	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.131	chr4	-	3599	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	368.923772614344	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080449	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068349_135069690_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.133	chr4	-	3861	20	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_16	508.387342240828	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080452	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065859_135065898_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073567_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.136	chr4	-	3712	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	448.895657952263	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080477	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135065859_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.138	chr4	-	3441	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	430.748668279907	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080481	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048482_135048664_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.14	chr4	-	5845	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	663	junction_5	199.914981929819	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080573	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.140	chr4	-	6421	16	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	663	junction_4	205.461042536049	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080447	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.142	chr4	-	3653	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	392.360419718832	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074508_135080405
ES.24687.144	chr4	-	3650	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	332.330785310437	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080405	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080362
ES.24687.146	chr4	-	5346	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	84	junction_13	379.410770632533	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080460	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.147	chr4	-	3912	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	466.107075204352	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080481	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135072645_135072789_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.149	chr4	-	5922	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	160	junction_13	346.476486295326	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080470	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.15	chr4	-	3656	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	371.032927910381	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080497	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065120_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.150	chr4	-	5616	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	3	-1	intron_retention	FALSE	canonical	3	84	junction_13	323.1588654884	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080442	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.152	chr4	-	5811	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	58	junction_11	324.87456714092	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080562	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.154	chr4	-	4140	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	12	junction_10	414.133973608645	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080481	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.157	chr4	-	3808	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	416.851653514847	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080462	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073567_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.160	chr4	-	3543	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	440.854691905394	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080449	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.161	chr4	-	3730	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	424.717974689901	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080481	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056763_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.163	chr4	-	5378	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	17	-1	intron_retention	FALSE	canonical	3	21	junction_3	454.233381472289	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080496	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.165	chr4	-	3728	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	467.743311609643	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080462	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.166	chr4	-	3622	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	325.011533508551	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080561	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052302_135052439_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.169	chr4	-	7854	15	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	940	junction_4	116.197601752623	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGCCACTCACA	NA	False	NA	-8	True	AATAAA	-11	NA	135080483	135047802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.170	chr4	-	3541	17	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	330.602858426844	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAACATTGCCACTCAC	NA	False	NA	-9	True	AATAAA	-10	NA	135080605	135047803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071842_135074425_135074516_135080407
ES.24687.175	chr4	-	7533	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	-3	intron_retention	FALSE	canonical	3	160	junction_13	282.619146949074	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAACATTGCCACTCA	NA	False	NA	-10	True	AATAAA	-9	NA	135080453	135047804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.176	chr4	-	8682	14	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	27	-4	intron_retention	FALSE	canonical	3	940	junction_3	113.674038294804	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGAACATTGCCACTC	NA	False	NA	-11	True	AATAAA	-8	NA	135080605	135047805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135052592_135054402_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.177	chr4	-	3581	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	373.826241178639	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGAACATTGCCACTC	NA	False	NA	-11	True	AATAAA	-8	NA	135080443	135047805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049795_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.180	chr4	-	5850	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	6	-6	intron_retention	FALSE	canonical	3	940	junction_4	114.540162776595	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGAACATTGCCAC	NA	False	NA	-13	True	AATAAA	-6	NA	135080549	135047807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.181	chr4	-	5652	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	-6	intron_retention	FALSE	canonical	3	42	junction_10	370.046459545585	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGAACATTGCCAC	NA	False	NA	-13	True	AATAAA	-6	NA	135080453	135047807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.183	chr4	-	3320	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	7	-182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	333.963634760674	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGGCTCCCGTCATGT	NA	False	NA	-125	True	NA	NA	NA	135080438	135047983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059552_135065252_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.184	chr4	-	3462	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	93	185	0	-185	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCGGTGGCTCCCGTCA	NA	False	NA	-128	True	NA	NA	NA	135080462	135047986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.185	chr4	-	3599	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	-29	-418	-29	-185	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCGGTGGCTCCCGTCA	NA	False	NA	-128	True	NA	NA	NA	135080584	135047986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.186	chr4	-	3267	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	96	-211	3	211	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTGTGGAGTCT	NA	False	NA	NA	False	AATGAA	-15	NA	135080459	135048193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.188	chr4	-	3148	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	1	135	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	299.84422387925	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTGTAAGCTTGCCCA	NA	False	NA	NA	False	CATAAA	-20	NA	135080461	135048269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.19	chr4	-	3574	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	320.271770408219	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080447	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056763_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.190	chr4	-	3134	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	1	133	combination_of_known_junctions	FALSE	canonical	3	58	junction_10	359.952118126495	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTTTGTAAGCTTGCC	NA	False	NA	NA	False	CATAAA	-18	NA	135080461	135048271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.191	chr4	-	3264	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-19	59	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_8	410.529904476076	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGTTTTGTTTTGTTT	NA	False	NA	43	True	TTTAAA	-19	NA	135080481	135048345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.192	chr4	-	3006	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	3	57	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTTGTTTTGTTTTGT	NA	False	NA	41	True	TTTAAA	-17	NA	135080442	135048347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.193	chr4	-	3203	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	6	-57	6	57	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTTGTTTTGTTTTGT	NA	False	NA	41	True	TTTAAA	-17	NA	135080549	135048347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.194	chr4	-	3131	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	77	589	0	21	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTGGTTCCTTTAAA	NA	False	NA	5	True	AAAAAG	-21	NA	135080555	135048383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.195	chr4	-	5232	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	15	intron_retention	FALSE	canonical	3	663	junction_5	199.914981929819	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCATTCTTGTGGTTCC	NA	False	NA	-1	True	AAAAAG	-15	NA	135080555	135048389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.197	chr4	-	3083	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	58	599	16	4	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTATTGTTGGCATT	NA	False	NA	-12	True	AAAAAG	-4	NA	135080497	135048400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.198	chr4	-	4935	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-7	0	intron_retention	FALSE	canonical	3	160	junction_15	300.677366778302	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTTGACTATTGTTGG	NA	False	NA	-16	True	TTTAAA	-4	NA	135080562	135048404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.199	chr4	-	3234	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_15	395.582510345629	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080555	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.2	chr4	-	2842	3	Intergenic	novelGene_20357	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCCCTACAAATGAGCCAC	9988	False	NA	NA	False	NA	NA	NA	135063584	135039128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135039156_135060686_135062523_135062605
ES.24687.20	chr4	-	3612	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	414.362711579366	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCACTCACATTTATTC	NA	False	NA	-1	True	AATAAA	-18	NA	135080479	135047795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052201_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069681_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.200	chr4	-	4099	13	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	2067	-6	intron_retention	FALSE	canonical	3	663	junction_5	175.571981914351	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	1124	False	NA	-22	True	NA	NA	NA	135072448	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174
ES.24687.201	chr4	-	3086	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	498.864565459685	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080484	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.203	chr4	-	3988	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	3	-6	intron_retention	FALSE	canonical	3	8	junction_15	381.543098224131	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080459	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135072789_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.204	chr4	-	1467	7	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	437.973267829594	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080555	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054445_135074461_135074516_135080407
ES.24687.205	chr4	-	3148	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	27	-6	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	330.400312926618	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080605	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.206	chr4	-	3078	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	405.223532277077	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	False	NA	-22	True	NA	NA	NA	135080462	135048410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.207	chr4	-	1287	6	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	479.775614219814	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGGGGGTTTGACTA	NA	False	NA	-23	True	NA	NA	NA	135080462	135048411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052503_135074416_135074516_135080407
ES.24687.208	chr4	-	3020	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	325.718975822829	1849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGGGGGTTTGACT	NA	False	NA	-24	True	NA	NA	NA	135080455	135048412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.21	chr4	-	3728	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	429.095330281204	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCACTCACATTTATTC	NA	False	NA	-1	True	AATAAA	-18	NA	135080455	135047795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073697_135074045_135074169_135074425_135074516_135080407
ES.24687.210	chr4	-	2435	14	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-1418	-52	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	333.695056200334	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAGAGTGAAATATTT	2325	False	NA	-68	True	NA	NA	NA	135071247	135048456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174
ES.24687.211	chr4	-	3053	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	47	697	-30	-87	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTCCACGGTGTATTAGT	NA	False	NA	77	True	TTTAAA	-32	NA	135080585	135048491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.212	chr4	-	3100	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	-41	93	36	-93	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGCGTCCACGGTGT	NA	False	NA	71	True	TTTAAA	-26	NA	135080596	135048497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.213	chr4	-	2764	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-19	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	455.690518761241	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACATTTGTTGTAATAA	NA	False	NA	-3	True	NA	NA	NA	135080481	135048571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.215	chr4	-	4971	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-8	-170	intron_retention	FALSE	canonical	3	283	junction_5	254.753388375678	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATAACATTTGTTGTAA	NA	False	NA	-6	True	NA	NA	NA	135080521	135048574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.216	chr4	-	3102	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	1	-176	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	419.825831024083	1846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAGACTATAACATTTG	NA	False	NA	-12	True	NA	NA	NA	135080554	135048580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065387_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.217	chr4	-	2716	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-14	-183	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	315.117727559435	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGAGCTTTAGACTATA	NA	False	NA	-19	True	NA	NA	NA	135080476	135048587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.218	chr4	-	2896	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	56	788	14	-185	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGCTTTAGACTA	NA	False	NA	-21	True	NA	NA	NA	135080499	135048589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.219	chr4	-	4647	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	-185	intron_retention	FALSE	canonical	3	155	junction_8	370.575219192521	1845	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGCTTTAGACTA	NA	False	NA	-21	True	NA	NA	NA	135080462	135048589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.22	chr4	-	4515	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	12	junction_9	329.080822139486	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCACTCACATTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	135080475	135047796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056829_135059031_135059119_135059468_135059550_135065114_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.221	chr4	-	3602	12	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_9	422.428926977199	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTCCTGATGGTACT	NA	False	NA	NA	False	NA	NA	NA	135080462	135057070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.222	chr4	-	5769	5	NNC	ENSMUSG00000028809.17	novel	619	6	NA	NA	-694	-1206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	612.126212475826	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAACGCTCGGCCAGG	3049	False	NA	NA	False	NA	NA	NA	135070523	135060674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135062523_135062605_135065390_135067813_135067919_135068157_135068347_135069680
ES.24687.223	chr4	-	6007	2	NNC	ENSMUSG00000028809.17	novel	776	4	NA	NA	-1380	-1206	intron_retention	FALSE	canonical	0	0	junction_1	0	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACAACGCTCGGCCAGG	6808	False	NA	NA	False	NA	NA	NA	135066764	135060674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135062523_135062605
ES.24687.224	chr4	-	3502	9	ISM	ENSMUSG00000028809.17	ENSMUST00000030613.11	2940	17	-15	13612	0	2624	5prime_fragment	FALSE	canonical	3	1177	junction_4	63.7689922689704	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGCTTTTTCTTGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	135080462	135062955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.225	chr4	-	3466	9	ISM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	112	15156	2	2622	5prime_fragment	FALSE	canonical	3	58	junction_2	405.999826816466	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAATGCTTTTTCTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	135080443	135062957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.226	chr4	-	6003	6	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	2	-679	intron_retention	FALSE	canonical	3	1177	junction_2	66.7634630617676	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTACTTTAATAACAGCAA	NA	False	NA	NA	False	NA	NA	NA	135080443	135066258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135067934_135068157_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.227	chr4	-	3261	3	NIC	ENSMUSG00000028809.17	novel	2847	4	NA	NA	26	13	intron_retention	FALSE	canonical	3	1232	junction_2	51.5	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGCCAGATCATTTGA	NA	False	NA	NA	False	NA	NA	NA	135080606	135070934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135071291_135071809_135074516_135080407
ES.24687.228	chr4	-	2879	4	FSM	ENSMUSG00000028809.17	ENSMUST00000134854.8	2847	4	-19	-13	-19	13	multi-exon	FALSE	canonical	3	1232	junction_3	55.3955473541571	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGCCAGATCATTTGA	NA	False	NA	NA	False	NA	NA	NA	135080481	135070934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.23	chr4	-	5130	14	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-2102	-2	intron_retention	FALSE	canonical	3	724	junction_5	165.097890990368	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCACTCACATTTATT	1641	False	NA	-2	True	AATAAA	-17	NA	135071931	135047796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809
ES.24687.24	chr4	-	3757	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	439.441876281446	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCACTCACATTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	135080569	135047796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.27	chr4	-	3629	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_13	331.696613788287	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCACTCACATTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	135080451	135047796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069858_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.3	chr4	-	3951	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	175	-329	-4	329	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAAAGCCTAAGGGTGT	NA	False	NA	NA	False	AATACA	-20	NA	135080457	135047465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.30	chr4	-	3650	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	435.669503943834	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCACTCACATTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	135080465	135047796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135073626_135073697_135074045_135074169_135074425_135074516_135080407
ES.24687.31	chr4	-	3833	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	331.761211913183	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCACTCACATTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	135080584	135047797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135058986_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.33	chr4	-	3689	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_6	365.535202648117	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCACTCACATTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	135080551	135047797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.34	chr4	-	3832	17	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	368.923772614344	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCACTCACATTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	135080555	135047797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068462_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.35	chr4	-	3673	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	333.963634760674	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCACTCACATTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	135080605	135047797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059552_135065252_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.38	chr4	-	3378	16	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_14	372.473509870911	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGCCACTCACATTTA	NA	False	NA	-4	True	AATAAA	-15	NA	135080479	135047798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071842_135074425_135074516_135080407
ES.24687.41	chr4	-	5816	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-35	3	intron_retention	FALSE	canonical	3	283	junction_5	254.753388375678	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGCCACTCACATTTA	NA	False	NA	-4	True	AATAAA	-15	NA	135080590	135047798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.42	chr4	-	5507	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-15	3	intron_retention	FALSE	canonical	3	160	junction_15	300.677366778302	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGCCACTCACATTTA	NA	False	NA	-4	True	AATAAA	-15	NA	135080528	135047798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.43	chr4	-	4276	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-10	3	intron_retention	FALSE	canonical	3	12	junction_10	331.208440625943	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGCCACTCACATTTA	NA	False	NA	-4	True	AATAAA	-15	NA	135080565	135047798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.44	chr4	-	3690	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080578	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.45	chr4	-	3740	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	325.718975822829	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080562	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.47	chr4	-	3931	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	425.346949886534	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080554	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135058986_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.49	chr4	-	3753	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_10	484.547875445364	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080481	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.5	chr4	-	3768	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	30	-1	30	1	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTCACATTTATTCGC	NA	False	NA	1	True	AATAAA	-20	NA	135080602	135047793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.50	chr4	-	3624	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	358.141360882822	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080554	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.51	chr4	-	3521	17	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	323.116459026386	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080451	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.52	chr4	-	3712	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	415.714817739976	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080481	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.53	chr4	-	3586	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	373.368764594737	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080562	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059552_135065252_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.54	chr4	-	3866	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	477.680765344646	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080584	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054529_135056310_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.56	chr4	-	3749	18	NIC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	37	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	330.400312926618	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080595	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.57	chr4	-	3655	18	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	395.918921482092	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080462	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065120_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.58	chr4	-	4497	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_1	477.010857344664	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080450	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048763_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135072789_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.59	chr4	-	3354	16	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	318.466575954212	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080481	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052532_135056778_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.6	chr4	-	3887	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	-124	-611	-47	1	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTCACATTTATTCGC	NA	False	NA	1	True	AATAAA	-20	NA	135080679	135047793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.60	chr4	-	3787	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	426.474247699222	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080461	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065120_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.62	chr4	-	3611	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	369.883089637794	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080457	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074051_135074169_135074425_135074516_135080407
ES.24687.63	chr4	-	3573	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_6	437.54328357318	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGCCACTCACATTT	NA	False	NA	-5	True	AATAAA	-14	NA	135080455	135047799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.64	chr4	-	3571	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	396.16724300359	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080478	135047800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.65	chr4	-	3803	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_13	417.266253779538	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080562	135047800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.67	chr4	-	3878	19	NNC	ENSMUSG00000028809.17	novel	3152	18	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	380.807657777811	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGCCACTCACATT	NA	False	NA	-6	True	AATAAA	-13	NA	135080606	135047800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.69	chr4	-	3586	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	370.012584245455	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080476	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.7	chr4	-	3880	18	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_15	395.582510345629	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080585	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.71	chr4	-	4008	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	0	intron_retention	FALSE	canonical	3	663	junction_5	171.951471624264	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080481	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.74	chr4	-	3637	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_10	362.778379101828	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080497	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.76	chr4	-	3585	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	406.864038741151	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080451	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.79	chr4	-	3630	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	506.924630803119	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080540	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135059031_135059116_135059468_135059550_135065114_135065390_135065859_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.8	chr4	-	3747	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	0	-7	0	0	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080555	135047794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.80	chr4	-	3768	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	470.903836084934	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080515	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.81	chr4	-	5524	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_9	390.435955432024	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080554	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065120_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.82	chr4	-	5715	17	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	13	junction_9	337.28798896492	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080456	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065120_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ES.24687.83	chr4	-	3614	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	447.236597780709	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080459	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056805_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.85	chr4	-	3687	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	406.882866027394	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080481	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067832_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.86	chr4	-	3753	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	405.223532277077	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080528	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.87	chr4	-	3805	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	454.805317188805	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080595	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.88	chr4	-	3631	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	434.292130162392	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080450	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.89	chr4	-	3867	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	519.687349622852	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080454	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135072645_135072789_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.90	chr4	-	3613	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	415.850635282732	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080470	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067822_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.92	chr4	-	3771	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_11	457.647365458506	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
ES.24687.93	chr4	-	6233	17	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	-16	0	intron_retention	FALSE	canonical	1	2	junction_8	420.063667049413	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080478	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135059119_135059468_135059550_135065114_135065390_135065872_135065898_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.94	chr4	-	3707	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	407.160022534896	1854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080447	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065387_135066273_135066337_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24687.98	chr4	-	5957	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	663	junction_5	202.173878984774	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080554	135047801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ES.24688.1	chr4	+	178	1	Intergenic	novelGene_20359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTCCGAGACAG	NA	False	NA	NA	False	NA	NA	NA	135082292	135082470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135082300_135082500
ES.24689.1	chr4	+	151	1	Intergenic	novelGene_20360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135102171	135102322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135102200_135102300
ES.2469.1	chr10	-	221	1	Intergenic	novelGene_1876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAGGGGTGCAAGCACA	NA	False	NA	NA	False	NA	NA	NA	23714876	23714655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_23714700_23714900
ES.24690.1	chr4	+	309	1	Intergenic	novelGene_20361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	135109151	135109460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135109200_135109500
ES.24691.1	chr4	+	180	1	Intergenic	novelGene_20362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	135111794	135111974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135111800_135112000
ES.24692.1	chr4	-	3917	5	NNC	ENSMUSG00000043924.17	novel	1801	5	NA	NA	4132	2273	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	7.44983221287567	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGCTGCGTTC	NA	False	NA	NA	False	NA	NA	NA	135108824	135094613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135098022_135099187_135099273_135104301_135104388_135107962_135108150_135108673
ES.24692.2	chr4	-	4093	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	7	2271	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	5705	False	NA	NA	False	NA	NA	NA	135125525	135094615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
ES.24692.3	chr4	-	1806	5	NIC	ENSMUSG00000043924.17	novel	2000	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.8309518948453	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTTTGTCACCTTGC	5720	False	NA	-1	True	ATTAAA	-16	NA	135125510	135096887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135098022_135099187_135099273_135104301_135104385_135107962_135108150_135125193
ES.24693.1	chr4	+	3440	2	Antisense	novelGene_ENSMUSG00000081136.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8468	False	NA	NA	False	NA	NA	NA	135129396	135132879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_135130009_135130051
ES.24693.2	chr4	+	3512	1	Antisense	novelGene_ENSMUSG00000081136.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTATGTGTATGT	8468	False	NA	NA	False	NA	NA	NA	135129396	135132908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_135129400_135132900
ES.24694.1	chr4	-	5759	1	Genic_Genomic	ENSMUSG00000059713.13	novel	NA	NA	NA	NA	10152	2951	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGCCAGAGAGAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	135142426	135136667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_135136700_135142400
ES.24694.10	chr4	-	5657	2	ISM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	14102	6	5516	-6	3prime_fragment	FALSE	canonical	3	66	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135147062	135139624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135143910_135145690
ES.24694.11	chr4	-	991	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	31.244999599936	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135161161	135139624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135139802_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.12	chr4	-	2104	5	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1304883272325	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135161094	135139624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135140982_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.14	chr4	-	1090	5	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.9476604409844	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135161140	135139624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135139919_135145690_135145863_135147556_135147731_135152524_135152757_135160922
ES.24694.15	chr4	-	5030	5	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	41.2492424172857	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	135161098	135139624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135143910_135145690_135145857_135147556_135147731_135152524_135152754_135160922
ES.24694.16	chr4	-	6875	4	FSM	ENSMUSG00000059713.13_ENSMUSG00000076123.3	ENSMUST00000156635.2	724	4	-23	-6128	7	-7	multi-exon	FALSE	canonical	3	97	junction_1	5.43650214343336	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGCTCATTGAGCAG	NA	False	NA	-11	True	AATAAA	-15	NA	135161157	135139625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.18	chr4	-	3790	5	FSM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	29	1292	-1	-1292	multi-exon	FALSE	canonical	3	12	junction_4	34.9311823447189	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGTCTGGGTGTGGTGG	NA	False	NA	NA	False	AATACA	-17	NA	135161135	135140910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152757_135160922
ES.24694.19	chr4	-	3671	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-6	-1413	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGATGCCTTGGGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	135161140	135141031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.2	chr4	-	5112	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGAGCAGTCTCTTCA	NA	False	NA	-3	True	AATAAA	-23	NA	135161167	135139617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.20	chr4	-	1387	5	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-12	2432	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.0078105935821	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTGTTCAGTAGACAT	NA	False	NA	NA	False	AATATA	-14	NA	135161146	135143321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.21	chr4	-	178	1	Intergenic	novelGene_20363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTTG	NA	False	NA	NA	False	NA	NA	NA	135150020	135149842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135149800_135150000
ES.24694.3	chr4	-	1941	5	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1304883272325	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161139	135139618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135140768_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.4	chr4	-	4699	6	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6736688497547	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161140	135139618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135141597_135141981_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24694.6	chr4	-	4904	4	NIC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.996598521394	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCATTGAGCAGTCTC	NA	False	NA	-7	True	AATAAA	-19	NA	135161135	135139621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135143910_135147556_135147731_135152524_135152754_135160922
ES.24694.8	chr4	-	7001	1	FSM	ENSMUSG00000076123.3	ENSMUST00000102169.3	79	1	-2679	-4243	-2679	4243	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTCATTGAGCAGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	135146623	135139622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135139600_135146600
ES.24694.9	chr4	-	4984	6	NNC	ENSMUSG00000059713.13	novel	5111	5	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6736688497547	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTCATTGAGCAGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	135161130	135139622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135141268_135141353_135143910_135145690_135145863_135147556_135147731_135152524_135152754_135160922
ES.24695.1	chr4	-	3916	2	NNC	ENSMUSG00000028803.19	novel	2624	12	NA	NA	6179	643	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135176195	135172087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135174765_135174956
ES.24695.10	chr4	-	3636	12	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	3303	-1276	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	21.7734389710973	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGATCGCTGGTAGGG	7608	False	NA	-9	True	ATTAAA	-14	NA	135218514	135177478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
ES.24695.11	chr4	-	3794	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	83	1276	-34	-1276	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGATCGCTGGTAGGG	4271	False	NA	-9	True	ATTAAA	-14	NA	135221851	135177478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.12	chr4	-	3084	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	70	1999	-47	995	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCCCGGGTGCTTTTCT	4258	False	NA	NA	False	NA	NA	NA	135221864	135178201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.13	chr4	-	2354	11	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	3469	2477	3352	517	3prime_fragment	FALSE	canonical	2	39	junction_10	10.406248123123	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTAAGTTCCTTGCGC	7657	False	NA	NA	False	NA	NA	NA	135218465	135178679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
ES.24695.16	chr4	-	2464	13	NNC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-15	374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	25.8403216354252	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGCAGCTTTCTTCCT	4290	False	NA	-2	True	NA	NA	NA	135221832	135178822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218242_135218594_135221740
ES.24695.18	chr4	-	4365	2	NNC	ENSMUSG00000028803.19	novel	769	2	NA	NA	-7619	374	intron_retention	FALSE	canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGCAGCTTTCTTCCT	NA	False	NA	-2	True	NA	NA	NA	135190265	135178822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135183114_135190191
ES.24695.19	chr4	-	2442	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	91	2620	-26	374	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGCAGCTTTCTTCCT	4279	False	NA	-2	True	NA	NA	NA	135221843	135178822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.2	chr4	-	2664	13	NNC	ENSMUSG00000028803.19	novel	2624	12	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5140032677522	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	3784	False	NA	NA	False	NA	NA	NA	135222338	135173445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135222033_135222112_135222301
ES.24695.20	chr4	-	2334	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	84	2735	-33	259	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCTGAAGATCCACTT	4272	False	NA	NA	False	NA	NA	NA	135221850	135178937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.21	chr4	-	2177	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	92	2884	-25	110	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATTCCATTGCTTCCT	4280	False	NA	NA	False	NA	NA	NA	135221842	135179086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.22	chr4	-	2122	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	28	128	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	25.815047291583	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCCTCTTTGCAA	3801	False	NA	-24	True	AGTAAA	-15	NA	135222321	135179359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135222033
ES.24695.23	chr4	-	2102	13	NNC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	55	128	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	22.2560853101648	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCCTCTTTGCAA	4360	False	NA	-24	True	AGTAAA	-15	NA	135221762	135179359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135179884_135182183_135182462_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.25	chr4	-	6039	12	NNC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	128	intron_retention	FALSE	canonical	0	0	junction_1	20.8825919039783	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCCTCTTTGCAA	4280	False	NA	-24	True	AGTAAA	-15	NA	135221842	135179359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135183114_135190191_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.26	chr4	-	1999	13	NNC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	25	128	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	25.5533211583587	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCCTCTTTGCAA	4213	False	NA	-24	True	AGTAAA	-15	NA	135221909	135179359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204747_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.28	chr4	-	2012	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	-16	3157	-16	128	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCCTCTTTGCAA	4172	False	NA	-24	True	AGTAAA	-15	NA	135221950	135179359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.3	chr4	-	1857	12	FSM	ENSMUSG00000028803.19	ENSMUST00000105856.9	2624	12	-113	880	4	-880	multi-exon	FALSE	canonical	0	0	junction_1	20.8825919039783	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCTCTCTTTTTTAAT	4192	False	NA	NA	False	NA	NA	NA	135221930	135174327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.30	chr4	-	2974	6	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	92	23357	-25	7311	5prime_fragment	FALSE	canonical	2	39	junction_4	11.3736537664903	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGCCTTTTGTCTGC	4280	False	NA	NA	False	AAAAAG	-9	NA	135221842	135199559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.4	chr4	-	5154	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	1	-2	1	2	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGTCCTGTGTTGCACTA	4189	False	NA	-1	True	ATTAAA	-24	NA	135221933	135176200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.5	chr4	-	5098	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGGGTCCTGTGTTGC	4273	False	NA	-5	True	ATTAAA	-20	NA	135221849	135176204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24695.8	chr4	-	5336	13	NNC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	22.2560853101648	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTCGGGTCCTGTGTTG	4280	False	NA	-6	True	ATTAAA	-19	NA	135221842	135176205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135179884_135182183_135182462_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ES.24696.1	chr4	-	283	1	Antisense	novelGene_ENSMUSG00000028801.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTCCACTTTCATGA	NA	False	NA	NA	False	NA	NA	NA	135247009	135246726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_135246700_135247000
ES.24697.1	chr4	+	1692	5	NNC	ENSMUSG00000028801.15	novel	1507	9	NA	NA	24732	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.11951543294907	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGGGTTCTTTGTGATC	NA	False	NA	10	True	ATTAAA	-22	NA	135248029	135265013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135248127_135252730_135252843_135256802_135256969_135260949_135261141_135263887
ES.24697.2	chr4	+	1668	5	NNC	ENSMUSG00000028801.15	novel	1507	9	NA	NA	28925	-105	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.02079728939615	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAAGCCGGGTTCTTTGT	NA	False	NA	6	True	ATTAAA	-18	NA	135252222	135265009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135252300_135252730_135252843_135256802_135256969_135260949_135261141_135263887
ES.24697.3	chr4	+	1917	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29107	105	29107	-105	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAAGCCGGGTTCTTTGT	NA	False	NA	6	True	ATTAAA	-18	NA	135252404	135265009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
ES.24697.4	chr4	+	1703	4	NNC	ENSMUSG00000028801.15	novel	1507	9	NA	NA	32063	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.2192186706253	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCGGGTTCTTTGTGA	NA	False	NA	8	True	ATTAAA	-20	NA	135255360	135265011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135255583_135256802_135256969_135260949_135261141_135263887
ES.24697.5	chr4	+	1358	2	NNC	ENSMUSG00000028801.15	novel	2380	9	NA	NA	39379	-103	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCGGGTTCTTTGTGA	NA	False	NA	8	True	ATTAAA	-20	NA	135262676	135265011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135262911_135263887
ES.24698.1	chr4	+	3767	2	Antisense	novelGene_ENSMUSG00000037188.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTCAGTTTCTAATCC	NA	False	NA	NA	False	NA	NA	NA	135285251	135290680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_135287391_135289052
ES.24699.1	chr4	-	3422	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	-2	634	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_11	58.2178285025778	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGTCCCTCAGAGCC	NA	False	NA	NA	False	AATAAA	-22	NA	135300943	135268564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.11	chr4	-	1067	4	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	24847	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	128.232427862673	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135276094	135269198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276064
ES.24699.12	chr4	-	1494	6	ISM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	21552	0	21552	0	intron_retention	FALSE	canonical	3	144	junction_4	61.2927401900095	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135279389	135269198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056
ES.24699.14	chr4	-	8659	12	NIC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	98	-1	intron_retention	FALSE	canonical	3	83	junction_7	51.1883574056083	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGTTTTCATGCGCTT	10	False	NA	-3	True	AATAAA	-19	NA	135300843	135269199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135273619_135275723_135275810_135276549_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.16	chr4	-	2694	16	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	4250	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	66.9877600760019	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGGTTTTCATGCGCT	4162	False	NA	-4	True	AATAAA	-18	NA	135296691	135269200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135296558
ES.24699.17	chr4	-	6200	15	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	53	-2	intron_retention	FALSE	canonical	3	83	junction_10	46.7461664913034	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGGTTTTCATGCGCT	NA	False	NA	-4	True	AATAAA	-18	NA	135300888	135269200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.18	chr4	-	1761	11	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	17612	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.2852508568097	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGGTTTTCATGCGCT	NA	False	NA	-4	True	AATAAA	-18	NA	135283329	135269200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283306
ES.24699.19	chr4	-	4060	15	NIC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	142	-2	intron_retention	FALSE	canonical	3	38	junction_5	64.4125732434028	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCGGTTTTCATGCGCT	54	False	NA	-4	True	AATAAA	-18	NA	135300799	135269200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.21	chr4	-	926	1	Intergenic	novelGene_20364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGGGGGTGTGCCCCG	9960	False	NA	NA	False	NA	NA	NA	135290893	135289967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135290000_135290900
ES.24699.3	chr4	-	2702	15	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	87	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	72.0572334881043	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTTTTCATGCGCTTCT	-1	True	NA	-1	True	AATAAA	-21	NA	135300854	135269197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276673_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.6	chr4	-	2909	5	ISM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	21552	0	21552	0	intron_retention	FALSE	canonical	3	144	junction_4	63.2905008670337	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135279389	135269198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606
ES.24699.7	chr4	-	3439	15	NNC	ENSMUSG00000037188.8	novel	2789	16	NA	NA	87	0	intron_retention	FALSE	canonical	3	83	junction_10	60.1090845115472	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	-1	True	NA	-2	True	AATAAA	-20	NA	135300854	135269198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135270085_135273553_135273619_135275723_135276639_135277606_135277642_135279056_135279191_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.24699.9	chr4	-	2840	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	-51	0	-51	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135300992	135269198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ES.247.1	chr1	+	6543	14	FSM	ENSMUSG00000037509.22	ENSMUST00000159747.9	6514	14	-32	3	-32	-3	multi-exon	FALSE	canonical	0	0	junction_3	9.13281358748051	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTGCTGGTCAGC	NA	False	NA	7	True	CATAAA	-16	NA	34717236	34851817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34717344_34760784_34764241_34771189_34771490_34784398_34784526_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.10	chr1	+	4287	2	ISM	ENSMUSG00000037509.22	ENSMUST00000160855.2	2339	6	-14	-14	5	14	intron_retention	FALSE	canonical	3	33	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTGATACACCTGCC	NA	False	NA	NA	False	NA	NA	NA	34840807	34848006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34841083_34843994
ES.247.11	chr1	+	2653	10	NNC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	8.22522467703189	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTGCTGGTCAGC	NA	False	NA	7	True	CATAAA	-16	NA	34840823	34851817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849614_34850166_34850245_34850758
ES.247.12	chr1	+	3523	4	FSM	ENSMUSG00000037509.22	ENSMUST00000159059.2	1024	4	21	-2520	2	0	multi-exon	FALSE	canonical	3	18	junction_2	6.64997911442	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGTGGAAAGTCATTA	NA	False	NA	NA	False	AATAAA	-26	NA	34840823	34848299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395
ES.247.13	chr1	+	3737	9	NIC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	2	7	intron_retention	FALSE	canonical	3	11	junction_6	6.35904867098845	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCATCTACTCATCAGA	NA	False	NA	NA	False	AATAAA	-25	NA	34840823	34852397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34849636_34850166_34850245_34850758
ES.247.15	chr1	+	6158	5	NIC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	22	0	intron_retention	FALSE	canonical	3	18	junction_2	5.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTGGTCAGCTGG	NA	False	NA	10	True	CATAAA	-19	NA	34840843	34851820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34841083_34843994_34844175_34845036_34849636_34850166_34850245_34850758
ES.247.16	chr1	+	5472	7	NNC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	24	-1	intron_retention	FALSE	canonical	2	3	junction_5	9.26312882106017	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGCTGGTCAGCTG	NA	False	NA	9	True	CATAAA	-18	NA	34840845	34851819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34848910_34849391_34849614_34850166_34850245_34850758
ES.247.17	chr1	+	3189	9	NNC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	32	-1	intron_retention	FALSE	canonical	2	3	junction_7	8.5110222652746	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGCTGGTCAGCTG	NA	False	NA	9	True	CATAAA	-18	NA	34840853	34851819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34846373_34846722_34846853_34848777_34848910_34849391_34849614_34850166_34850245_34850758
ES.247.18	chr1	+	3632	4	NIC	ENSMUSG00000037509.22	novel	6514	14	NA	NA	5840	0	intron_retention	FALSE	canonical	3	14	junction_1	4.64279609239471	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGCTGGTCAGCTGG	NA	False	NA	10	True	CATAAA	-19	NA	34846661	34851820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.2	chr1	+	7089	14	FSM	ENSMUSG00000037509.22	ENSMUST00000159747.9	6514	14	3	-578	3	8	multi-exon	FALSE	canonical	0	0	junction_3	9.13281358748051	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCATCTACTCATCAGAT	NA	False	NA	NA	False	AATAAA	-26	NA	34717271	34852398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34717344_34760784_34764241_34771189_34771490_34784398_34784526_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.3	chr1	+	2930	7	NIC	ENSMUSG00000037509.22	novel	1206	6	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.01233722306385	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGAAAGTCATTAAGACA	NA	False	NA	NA	False	AATAAA	-31	NA	34789666	34848304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34790105_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722
ES.247.4	chr1	+	2972	11	NIC	ENSMUSG00000037509.22	novel	1206	6	NA	NA	19	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.28009661779378	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGACCTGGCTGCTGG	NA	False	NA	2	True	CATAAA	-11	NA	34789680	34851812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34790105_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.5	chr1	+	272	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34835608	34835880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34835600_34835900
ES.247.6	chr1	+	3678	8	NIC	ENSMUSG00000037509.22	novel	3287	10	NA	NA	-33	14	intron_retention	FALSE	canonical	3	11	junction_4	6.73704349860091	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGTGTGTGTCAAT	NA	False	NA	24	True	CATAAA	-33	NA	34840751	34851834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.7	chr1	+	3276	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	11	0	-6	0	multi-exon	FALSE	canonical	3	11	junction_6	6.35959467611297	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGAGCCCATCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	34840795	34852390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.247.8	chr1	+	3242	4	FSM	ENSMUSG00000037509.22	ENSMUST00000159059.2	1024	4	-7	-2211	-6	-2	multi-exon	FALSE	canonical	3	18	junction_2	6.64997911442	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAAGGCG	NA	False	NA	NA	False	NA	NA	NA	34840795	34847990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395
ES.247.9	chr1	+	2698	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	18	571	0	-1	multi-exon	FALSE	canonical	3	11	junction_6	6.35959467611297	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGCTGGTCAGCTG	NA	False	NA	9	True	CATAAA	-18	NA	34840802	34851819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ES.2470.1	chr10	+	2392	7	FSM	ENSMUSG00000037440.9	ENSMUST00000041416.8	2416	7	15	9	15	-9	multi-exon	FALSE	canonical	0	0	junction_4	1.59861050777091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTCCAGTCTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	23770600	23781232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_23770990_23773190_23773322_23774305_23774499_23775291_23775584_23776482_23776842_23779283_23779455_23780375
ES.24700.1	chr4	+	5898	2	Genic_Genomic	ENSMUSG00002075369.1	novel	101	1	NA	NA	-6194	407	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCGTGTGTCTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	135304864	135311566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_135305168_135305971
ES.24700.2	chr4	+	3096	2	Genic_Genomic	ENSMUSG00002075369.1	novel	101	1	NA	NA	-6161	408	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGTGTGTCTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	135304897	135311567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_135305515_135309088
ES.24701.1	chr4	+	2745	3	NNC	ENSMUSG00000086788.3	novel	2963	3	NA	NA	-8275	0	intron_retention	FALSE	canonical	1	2	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGCAATCATTAAGA	7889	False	NA	NA	False	NA	NA	NA	135345690	135357509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135345812_135354175_135354357_135355066
ES.24701.2	chr4	+	2797	2	FSM	ENSMUSG00000086788.3	ENSMUST00000134416.2	1002	2	-84	-1711	35	-2	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGTGCAATCATTAA	NA	False	NA	NA	False	NA	NA	NA	135354000	135357507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135354357_135355066
ES.24702.1	chr4	-	178	1	Intergenic	novelGene_20365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGAGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	135360507	135360329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135360300_135360500
ES.24703.1	chr4	+	176	1	Intergenic	novelGene_20366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATTATAT	9219	False	NA	NA	False	NA	NA	NA	135366948	135367124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135366900_135367100
ES.24704.1	chr4	-	4188	4	Intergenic	novelGene_20367	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTATTTTATCATGTC	6030	False	NA	NA	False	AATAAA	-21	NA	135392185	135384974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135388708_135389364_135389481_135390862_135390996_135391979
ES.24705.1	chr4	-	1970	2	Intergenic	novelGene_20368	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTGGAGTCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	135400985	135396141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135397637_135400510
ES.24706.1	chr4	+	1541	1	Intergenic	novelGene_20369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGACTGCTGCTGTGT	4223	False	NA	NA	False	AATAAA	-19	NA	135402547	135404088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135402500_135404100
ES.24706.2	chr4	+	2747	5	Intergenic	novelGene_20370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.707106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTCACTACTGTCTT	4228	False	NA	NA	False	AATAAA	-21	NA	135402552	135411749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135402699_135403406_135403690_135407638_135407807_135408179_135408385_135409804
ES.24707.1	chr4	+	4276	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	-94	0	-94	0	multi-exon	TRUE	canonical	3	21	junction_5	3.02305952453618	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135413503	135435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
ES.24707.10	chr4	+	3880	7	NNC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	233	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.62057979310787	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTAATGTGCACGCAG	NA	False	NA	3	True	AATAAA	-17	NA	135413830	135435488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431546_135432363
ES.24707.11	chr4	+	2599	1	Intergenic	novelGene_20371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	135418149	135420748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135418100_135420700
ES.24707.12	chr4	+	3805	2	NIC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	17337	0	intron_retention	FALSE	canonical	3	21	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135430934	135435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135431611_135432363
ES.24707.2	chr4	+	4204	7	NNC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	-76	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.62057979310787	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTAATGTGCACGCAGT	NA	False	NA	4	True	AATAAA	-18	NA	135413521	135435489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431530_135431611_135432363
ES.24707.3	chr4	+	4211	7	NNC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.4339811320566	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135413535	135435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428649_135431020_135431181_135431479_135431611_135432363
ES.24707.5	chr4	+	6305	6	NIC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	208	-8	intron_retention	FALSE	canonical	3	21	junction_4	3.286335345031	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAAAGCTAATGTGCAC	NA	False	NA	-1	True	AATAAA	-13	NA	135413805	135435484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135431181_135431479_135431611_135432363
ES.24707.6	chr4	+	3328	8	NNC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.90768986749708	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135413805	135435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363_135433170_135433815
ES.24707.7	chr4	+	3783	6	NIC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	212	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.23904756996088	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTAATGTGCACGCA	NA	False	NA	2	True	AATAAA	-16	NA	135413809	135435487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135413911_135417832_135417957_135428538_135428682_135431020_135431181_135431479_135431611_135432363
ES.24707.8	chr4	+	3714	6	NNC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	217	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.9243955371228	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135413814	135435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428649_135431020_135431181_135432450
ES.24707.9	chr4	+	3790	6	NIC	ENSMUSG00000062157.7	novel	4182	7	NA	NA	230	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.3227903204512	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCACGCAGTT	NA	False	NA	5	True	AATAAA	-19	NA	135413827	135435490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431479_135431611_135432363
ES.24708.1	chr4	-	178	1	Intergenic	novelGene_20372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAAATCTTTTTTTA	9259	False	NA	NA	False	NA	NA	NA	135485362	135485184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135485200_135485400
ES.24709.1	chr4	+	5448	34	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	4855	-6	4855	6	3prime_fragment	FALSE	canonical	0	0	junction_1	3.80662030241023	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGTGGTCTCTGAAATGA	NA	False	NA	NA	False	AATAAA	-35	NA	135491880	135542881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135492260_135492854_135493013_135497981_135498078_135498842_135498932_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.11	chr4	+	4304	27	NNC	ENSMUSG00000037139.16	novel	2551	13	NA	NA	17380	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.38636318508541	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCAGCACCCGTGGTC	8408	False	NA	NA	False	AATAAA	-25	NA	135504405	135542871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135504484_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.12	chr4	+	4317	28	NNC	ENSMUSG00000037139.16	novel	2551	13	NA	NA	17380	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.78140711647414	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCACCCGTGGTCTCTGA	8408	False	NA	NA	False	AATAAA	-30	NA	135504405	135542876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135504447_135505196_135505254_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510498_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.13	chr4	+	4297	28	NNC	ENSMUSG00000037139.16	novel	2551	13	NA	NA	18091	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	3.4751715868859	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCAGCACCCGTGGTC	9119	False	NA	NA	False	AATAAA	-25	NA	135505116	135542871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135505254_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525640_135525705_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.14	chr4	+	4349	27	NNC	ENSMUSG00000037139.16	novel	2551	13	NA	NA	18112	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.14092098203451	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCCGTGGTCTCTGAAA	9140	False	NA	NA	False	AATAAA	-32	NA	135505137	135542878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135505254_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.15	chr4	+	4434	26	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	18115	3	18115	-3	3prime_fragment	FALSE	canonical	2	3	junction_6	3.00026665481587	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCAGCACCCGTGGTCT	9143	False	NA	NA	False	AATAAA	-26	NA	135505140	135542872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.16	chr4	+	2490	13	FSM	ENSMUSG00000037139.16	ENSMUST00000145304.8	2551	13	54	7	54	-7	multi-exon	FALSE	canonical	2	6	junction_3	2.62466929133727	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGAGGCAGCACCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	135525554	135542868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.17	chr4	+	2087	9	ISM	ENSMUSG00000037139.16	ENSMUST00000145304.8	2551	13	4960	7	2506	-7	3prime_fragment	FALSE	canonical	2	7	junction_3	2.3418742493994	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGAGGCAGCACCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	135530460	135542868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.18	chr4	+	4080	7	NIC	ENSMUSG00000037139.16	novel	2551	13	NA	NA	4764	7	intron_retention	FALSE	canonical	2	7	junction_2	2.47767812455308	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGTCTCTGAAATGAC	NA	False	NA	NA	False	AATAAA	-36	NA	135532718	135542882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135533437_135534194_135534234_135534479_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.2	chr4	+	5161	33	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	5729	2	5729	-2	3prime_fragment	FALSE	canonical	1	1	junction_3	3.626616019101	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGCACCCGTGGTCTC	NA	False	NA	NA	False	AATAAA	-27	NA	135492754	135542873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135493013_135497981_135498078_135498842_135498932_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.3	chr4	+	2835	16	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	5730	25306	5730	-15854	internal_fragment	FALSE	canonical	1	1	junction_3	3.17630113321909	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTGTGTATCTGCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	135492755	135517569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135493013_135497981_135498078_135498842_135498932_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844
ES.24709.4	chr4	+	4995	34	NNC	ENSMUSG00000037139.16	novel	5575	37	NA	NA	5829	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	3.80662030241023	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGCACCCGTGGTCTC	NA	False	NA	NA	False	AATAAA	-27	NA	135492854	135542873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135493013_135497981_135498078_135498842_135498932_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525639_135525704_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.5	chr4	+	4984	32	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	10873	4	10873	-4	3prime_fragment	FALSE	canonical	1	1	junction_2	3.53546032485684	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCAGCACCCGTGGTC	1901	False	NA	NA	False	AATAAA	-25	NA	135497898	135542871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135498078_135498842_135498932_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.6	chr4	+	4892	31	NIC	ENSMUSG00000037139.16	novel	5575	37	NA	NA	10873	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.54964786985977	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGAGGCAGCACCCGTG	1901	False	NA	NA	False	AATAAA	-22	NA	135497898	135542868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135498078_135501075_135501121_135501591_135501733_135502855_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.7	chr4	+	3274	12	NNC	ENSMUSG00000037139.16	novel	5575	37	NA	NA	15692	-13984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.14130046239473	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGGGCTATGGTGGTA	6720	False	NA	NA	False	NA	NA	NA	135502717	135519439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135517964
ES.24709.8	chr4	+	4663	28	ISM	ENSMUSG00000037139.16	ENSMUST00000105854.2	5575	37	15699	2	15699	-2	3prime_fragment	FALSE	canonical	2	3	junction_8	2.88793906512858	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGCACCCGTGGTCTC	6727	False	NA	NA	False	AATAAA	-27	NA	135502724	135542873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.24709.9	chr4	+	4569	29	NNC	ENSMUSG00000037139.16	novel	5575	37	NA	NA	15723	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	3.26702760743693	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGGCAGCACCCGTGG	6751	False	NA	NA	False	AATAAA	-23	NA	135502748	135542869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135503018_135503645_135503788_135505347_135505548_135506663_135506718_135507110_135507239_135510325_135510510_135513124_135513300_135514709_135514832_135515205_135515394_135515598_135515726_135516844_135517024_135522392_135522508_135523591_135523749_135524274_135524385_135524764_135524810_135525605_135525640_135525705_135525743_135528312_135528458_135528652_135528713_135529026_135529095_135530518_135530630_135533348_135533437_135534194_135534234_135534479_135534589_135536106_135536271_135538059_135538097_135538245_135538269_135539754_135539811_135541466
ES.2471.1	chr10	+	198	1	FSM	ENSMUSG00000056379.4	ENSMUST00000051532.5	1114	1	1101	-185	1101	185	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGAGCCAACTAT	293	False	NA	NA	False	NA	NA	NA	23797354	23797552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_23797400_23797600
ES.24710.1	chr4	-	158	1	Intergenic	novelGene_20373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	135550418	135550260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135550300_135550400
ES.24711.1	chr4	-	176	1	Intergenic	novelGene_20374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	135562498	135562322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135562300_135562500
ES.24712.1	chr4	+	202	1	Intergenic	novelGene_20375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135564268	135564470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135564300_135564500
ES.24713.1	chr4	-	744	1	Antisense	novelGene_ENSMUSG00000028676.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGTGTGTGGTTTT	NA	False	NA	NA	False	AATACA	-18	NA	135583191	135582447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_135582400_135583200
ES.24714.1	chr4	+	3288	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	565.56856839428	1083	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4506	False	NA	NA	False	AATAAA	-17	NA	135583242	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.100	chr4	+	698	5	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	6	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	682.022864352802	1037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAATTGTATCTCTCCT	4712	False	NA	NA	False	AATATA	-14	NA	135583448	135591007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836
ES.24714.101	chr4	+	1265	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	6	-997	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGGAAACTAATCCC	4712	False	NA	NA	False	NA	NA	NA	135583448	135594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.102	chr4	+	4710	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	618.285712451956	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTGGTTT	4712	False	NA	12	True	AATAAA	-17	NA	135583448	135597208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135589417_135590514_135590833_135590888_135594436
ES.24714.103	chr4	+	6045	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	6	396	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	565.56856839428	1108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAGCGTTTATTTCG	4712	False	NA	2	True	AATAAA	-13	NA	135583448	135596089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.106	chr4	+	8372	5	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	7	-7	intron_retention	FALSE	canonical	3	381	junction_2	490.211433975178	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAATGTTTTGGATTCC	4713	False	NA	7	True	AATAAA	-14	NA	135583449	135595686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833
ES.24714.107	chr4	+	3832	8	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	656.050893993907	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4713	False	NA	23	True	AATAAA	-28	NA	135583449	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585721_135586147_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.11	chr4	+	3461	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-70	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	623.730198082472	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTCTGTAGACTT	4616	False	NA	24	True	AATAAA	-29	NA	135583352	135597220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.110	chr4	+	9095	4	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	9	398	intron_retention	FALSE	canonical	3	381	junction_2	558.131605348496	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCGTTTATTTCGAG	4715	False	NA	4	True	AATAAA	-15	NA	135583451	135596091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350
ES.24714.111	chr4	+	4696	4	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	14	-22	intron_retention	FALSE	canonical	3	216	junction_3	675.354886131893	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4720	False	NA	NA	False	NA	NA	NA	135583456	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081
ES.24714.112	chr4	+	3132	4	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_2	730.12571215891	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4720	False	NA	NA	False	AATAAA	-17	NA	135583456	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350
ES.24714.113	chr4	+	5595	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	14	-22	intron_retention	FALSE	non_canonical	0	0	junction_2	578.7306800231	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4720	False	NA	NA	False	NA	NA	NA	135583456	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585720_135586125_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.114	chr4	+	4654	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	14	-997	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGGAAACTAATCCC	4720	False	NA	NA	False	NA	NA	NA	135583456	135594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.115	chr4	+	3026	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	14	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	619.475494986597	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4720	False	NA	NA	False	NA	NA	NA	135583456	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585720_135586125_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.117	chr4	+	3705	6	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	14	-11	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	682.941695900902	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTGGTTT	4720	False	NA	12	True	AATAAA	-17	NA	135583456	135597208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135594436
ES.24714.118	chr4	+	3302	5	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	764.492437830486	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4720	False	NA	23	True	AATAAA	-28	NA	135583456	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135594436
ES.24714.119	chr4	+	2720	4	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_1	531.097605593046	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4721	False	NA	NA	False	AATAAA	-17	NA	135583457	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135589066_135589189_135590350_135590514_135590836
ES.24714.12	chr4	+	5026	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-70	-3	intron_retention	FALSE	canonical	3	29	junction_6	581.823474565573	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGGATTCCTTAG	4616	False	NA	11	True	AATAAA	-18	NA	135583352	135595690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.120	chr4	+	6195	6	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	17	398	intron_retention	FALSE	canonical	3	216	junction_3	591.260822311101	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCGTTTATTTCGAG	4723	False	NA	4	True	AATAAA	-15	NA	135583459	135596091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836
ES.24714.121	chr4	+	3778	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	18	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	611.515171974952	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTGGTTT	4724	False	NA	12	True	AATAAA	-17	NA	135583460	135597208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590820_135590888_135594436
ES.24714.122	chr4	+	3730	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	655.560765045214	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4724	False	NA	23	True	AATAAA	-28	NA	135583460	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585720_135586125_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.125	chr4	+	6079	4	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	38	-22	intron_retention	FALSE	canonical	3	381	junction_2	558.131605348496	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4744	False	NA	NA	False	NA	NA	NA	135583480	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350
ES.24714.126	chr4	+	3288	7	NNC	ENSMUSG00000028676.18	novel	522	3	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	476.040847920521	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4927	False	NA	NA	False	AATAAA	-17	NA	135583663	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135584027_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.127	chr4	+	3262	7	NNC	ENSMUSG00000028676.18	novel	394	3	NA	NA	238	-22	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	524.223446845162	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4944	False	NA	NA	False	NA	NA	NA	135583680	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135584027_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.128	chr4	+	3293	7	NNC	ENSMUSG00000028676.18	novel	522	3	NA	NA	244	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	464.697302911619	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4950	False	NA	NA	False	AATAAA	-17	NA	135583686	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135584045_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.129	chr4	+	3681	6	NNC	ENSMUSG00000028676.18	novel	394	3	NA	NA	278	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	607.563461705853	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4984	False	NA	NA	False	NA	NA	NA	135583720	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135584910_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.131	chr4	+	3131	6	NNC	ENSMUSG00000028676.18	novel	394	3	NA	NA	543	0	intron_retention	FALSE	canonical	1	35	junction_1	542.286787594904	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	5249	False	NA	NA	False	AATAAA	-17	NA	135583985	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135584027_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833
ES.24714.132	chr4	+	3358	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	2260	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	520.483989507202	1081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAATGATTAACTGGA	6966	False	NA	NA	False	AATAAA	-12	NA	135585702	135593121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135585783_135586152_135586513_135589081_135589189_135589797_135590235_135590275_135590514_135590833_135590888_135591039
ES.24714.133	chr4	+	6785	5	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	2789	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_1	446.785742834303	1114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	7495	False	NA	23	True	AATAAA	-28	NA	135586231	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.134	chr4	+	6785	4	ISM	ENSMUSG00000028676.18	ENSMUST00000105853.10	3058	6	4217	-2567	-1824	0	3prime_fragment	FALSE	canonical	3	1107	junction_3	89.9592500339274	1102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	8538	False	NA	14	True	AATAAA	-21	NA	135587274	135595693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.135	chr4	+	3298	1	Genic_Genomic	ENSMUSG00000028676.18	novel	NA	NA	NA	NA	507	-1283	mono-exon	FALSE	NA	NA	NA	NA	NA	1077	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAACATCCTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	135591112	135594410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_135591100_135594400
ES.24714.14	chr4	+	3072	5	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-58	0	intron_retention	FALSE	non_canonical	0	0	junction_2	634.023806729684	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4628	False	NA	NA	False	AATAAA	-17	NA	135583364	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590888_135591039
ES.24714.15	chr4	+	1302	5	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-52	-188	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	623.711221239445	1036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAGACATTTGTCACT	4634	False	NA	NA	False	ATTAAA	-35	NA	135583370	135590786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350
ES.24714.16	chr4	+	1903	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	623.730198082472	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTGGATTCCTTAG	4644	False	NA	11	True	AATAAA	-18	NA	135583380	135595690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.17	chr4	+	1122	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-40	334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1053	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTAAGAGTCCAGTTTG	4646	False	NA	8	True	ATTAAA	-22	NA	135583382	135591514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.18	chr4	+	2323	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-40	-5	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTTTTGGATTCCTT	4646	False	NA	9	True	AATAAA	-16	NA	135583382	135595688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.19	chr4	+	2898	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-38	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	589.701454598474	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTATTATAGTTCTGA	4648	False	NA	NA	False	AATAAA	-28	NA	135583384	135593137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586229_135589066_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.2	chr4	+	3288	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4516	False	NA	NA	False	AATAAA	-17	NA	135583252	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.20	chr4	+	3954	8	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	600.067547218219	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4648	False	NA	23	True	AATAAA	-28	NA	135583384	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.22	chr4	+	5716	6	NIC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	381	junction_2	439.264567202956	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4657	False	NA	NA	False	AATAAA	-17	NA	135583393	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.23	chr4	+	891	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-25	-998	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	623.730198082472	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTGTGGAAACTAATCC	4661	False	NA	NA	False	NA	NA	NA	135583397	135594695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.25	chr4	+	2600	5	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	-19	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	517.151090108104	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4667	False	NA	NA	False	NA	NA	NA	135583403	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135589066_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.26	chr4	+	1523	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-19	332	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1053	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTTAAGAGTCCAGTT	4667	False	NA	6	True	ATTAAA	-20	NA	135583403	135591512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.27	chr4	+	2868	5	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-19	3	intron_retention	FALSE	non_canonical	0	0	junction_2	646.91281290449	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAACTGGAATTATTAT	4667	False	NA	NA	False	AATAAA	-20	NA	135583403	135593129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833
ES.24714.28	chr4	+	5280	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	4667	False	NA	14	True	AATAAA	-21	NA	135583403	135595693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.3	chr4	+	6193	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-110	398	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCGTTTATTTCGAG	4576	False	NA	4	True	AATAAA	-15	NA	135583312	135596091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.30	chr4	+	3849	5	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-15	-22	intron_retention	FALSE	non_canonical	0	0	junction_2	638.263464409487	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4671	False	NA	NA	False	NA	NA	NA	135583407	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135590514_135590833_135590888_135591039
ES.24714.31	chr4	+	2277	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-15	398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	623.730198082472	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCGTTTATTTCGAG	4671	False	NA	4	True	AATAAA	-15	NA	135583407	135596091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.32	chr4	+	3875	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-15	-997	intron_retention	FALSE	canonical	3	381	junction_2	515.448154521868	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTGGAAACTAATCCC	4671	False	NA	NA	False	NA	NA	NA	135583407	135594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.34	chr4	+	2221	5	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-12	399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	764.492437830486	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGCGTTTATTTCGAGA	4674	False	NA	5	True	AATAAA	-16	NA	135583410	135596092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135594436
ES.24714.35	chr4	+	3569	5	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-11	-22	intron_retention	FALSE	canonical	3	90	junction_3	659.549609582175	1083	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4675	False	NA	NA	False	NA	NA	NA	135583411	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350
ES.24714.37	chr4	+	2683	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-11	397	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	573.463744858092	1108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGCGTTTATTTCGA	4675	False	NA	3	True	AATAAA	-14	NA	135583411	135596090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590836_135590888_135594436
ES.24714.38	chr4	+	3183	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-8	481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCTGGTAATTTATTAT	4678	False	NA	NA	False	NA	NA	NA	135583414	135593607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.39	chr4	+	5415	5	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-8	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	646.91281290449	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAATGTTTTGGATTCCT	4678	False	NA	8	True	AATAAA	-15	NA	135583414	135595687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833
ES.24714.40	chr4	+	5669	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-8	400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCGTTTATTTCGAGAT	4678	False	NA	6	True	AATAAA	-17	NA	135583414	135596093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.42	chr4	+	5361	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-6	396	intron_retention	FALSE	canonical	3	29	junction_6	581.823474565573	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAGCGTTTATTTCG	4680	False	NA	2	True	AATAAA	-13	NA	135583416	135596089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.43	chr4	+	2712	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	700.070853556981	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4681	False	NA	NA	False	AATAAA	-17	NA	135583417	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590820_135590888_135591039
ES.24714.44	chr4	+	6388	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	381	junction_2	515.448154521868	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4681	False	NA	23	True	AATAAA	-28	NA	135583417	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.45	chr4	+	4851	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	381	junction_2	544.642782014046	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTTTTGGATTCCTT	4684	False	NA	9	True	AATAAA	-16	NA	135583420	135595688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590836_135590888_135594436
ES.24714.46	chr4	+	6938	5	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	682.022864352802	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4684	False	NA	23	True	AATAAA	-28	NA	135583420	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836
ES.24714.47	chr4	+	3905	8	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	620.759837223869	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4687	False	NA	23	True	AATAAA	-28	NA	135583423	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.48	chr4	+	3125	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	594.895719153085	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4687	False	NA	NA	False	NA	NA	NA	135583423	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589048_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.49	chr4	+	3489	7	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	658.554836154304	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4689	False	NA	23	True	AATAAA	-28	NA	135583425	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.5	chr4	+	3906	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	588.409437948328	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4584	False	NA	23	True	AATAAA	-28	NA	135583320	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.51	chr4	+	6051	5	NIC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	1107	junction_4	226.840252159973	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4692	False	NA	NA	False	AATAAA	-17	NA	135583428	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.52	chr4	+	2249	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	6	397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	692.771361994706	1108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGCGTTTATTTCGA	4692	False	NA	3	True	AATAAA	-14	NA	135583428	135596090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590839_135590888_135594436
ES.24714.54	chr4	+	2654	6	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	7	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	540.182561732605	1083	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4693	False	NA	NA	False	NA	NA	NA	135583429	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585623_135585719_135589081_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.57	chr4	+	1953	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	658.554836154304	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTTTTGGATTCCTT	4694	False	NA	9	True	AATAAA	-16	NA	135583430	135595688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039_135591142_135594436
ES.24714.58	chr4	+	2756	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	578.356084086612	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGAAATAATGATTAAC	4694	False	NA	NA	False	AATAAA	-8	NA	135583430	135593117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135589066_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.59	chr4	+	3551	8	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	9	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	670.079191177416	1083	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4695	False	NA	NA	False	NA	NA	NA	135583431	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589086_135589189_135589801_135589970_135590049_135590514_135590833_135590888_135591039
ES.24714.67	chr4	+	3426	6	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	216	junction_3	564.049146794852	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4698	False	NA	NA	False	AATAAA	-17	NA	135583434	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590888_135591039
ES.24714.68	chr4	+	3258	6	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	216	junction_3	582.181071488931	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4698	False	NA	NA	False	AATAAA	-17	NA	135583434	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833
ES.24714.69	chr4	+	3802	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4698	False	NA	23	True	AATAAA	-28	NA	135583434	135597219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.7	chr4	+	2808	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-100	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTATAGTTCTGAATG	4586	False	NA	NA	False	AATAAA	-31	NA	135583322	135593140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.70	chr4	+	3072	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	589.701454598474	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4698	False	NA	NA	False	NA	NA	NA	135583434	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586501_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.71	chr4	+	5245	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	400	intron_retention	FALSE	canonical	3	381	junction_2	515.448154521868	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCGTTTATTTCGAGAT	4698	False	NA	6	True	AATAAA	-17	NA	135583434	135596093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.72	chr4	+	5673	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	4698	False	NA	14	True	AATAAA	-21	NA	135583434	135595693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.75	chr4	+	2152	5	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	-7	389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	552.044099234835	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAACTGAATTTAGCGTT	4699	False	NA	-5	True	AATAAA	-6	NA	135583435	135596082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135589066_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.79	chr4	+	6763	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-7	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	578.7306800231	1116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTGGTTT	4699	False	NA	12	True	AATAAA	-17	NA	135583435	135597208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.8	chr4	+	3215	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	659.776393097608	1083	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4597	False	NA	NA	False	AATAAA	-17	NA	135583333	135593126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589086_135589189_135590350_135590514_135590820_135590888_135591039
ES.24714.81	chr4	+	4060	6	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-7	332	intron_retention	FALSE	canonical	3	381	junction_2	439.264567202956	1053	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTTAAGAGTCCAGTT	4699	False	NA	6	True	ATTAAA	-20	NA	135583435	135591512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590514_135590833_135590888_135591039
ES.24714.88	chr4	+	4260	6	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	-6	-984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	618.505101029894	1087	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCCCTAAATATGAACAG	4700	False	NA	NA	False	NA	NA	NA	135583436	135594709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.89	chr4	+	687	4	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	-6	-313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	730.12571215891	1036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCTTTAAAGGAGATAT	4700	False	NA	NA	False	NA	NA	NA	135583436	135590661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350
ES.24714.9	chr4	+	2772	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	-86	398	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	1108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCGTTTATTTCGAG	4600	False	NA	4	True	AATAAA	-15	NA	135583336	135596091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ES.24714.93	chr4	+	2098	6	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	2	-571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	618.505101029894	1079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTAGTGTCTCTAAGAT	4708	False	NA	NA	False	AATAAA	-35	NA	135583444	135592555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836_135590888_135591039
ES.24714.94	chr4	+	5703	4	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	3	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	730.12571215891	1105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAATGTTTTGGATTCC	4709	False	NA	7	True	AATAAA	-14	NA	135583445	135595686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350
ES.24714.96	chr4	+	5961	5	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	4	-22	intron_retention	FALSE	canonical	3	381	junction_2	483.428640028702	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4710	False	NA	NA	False	NA	NA	NA	135583446	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135585783_135586152_135589189_135590350_135590888_135591039
ES.24714.98	chr4	+	6482	3	NIC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	5	-22	intron_retention	FALSE	canonical	3	1274	junction_2	225	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4711	False	NA	NA	False	NA	NA	NA	135583447	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135583603_135585615_135589189_135590350
ES.24714.99	chr4	+	2669	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	6	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	700.070853556981	1083	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAGGA	4712	False	NA	NA	False	NA	NA	NA	135583448	135593104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135583603_135585615_135585716_135589081_135589189_135590350_135590514_135590807_135590888_135591039
ES.24715.1	chr4	-	6900	2	Antisense	novelGene_ENSMUSG00000028676.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCACGCCTTTGATCCCAG	NA	False	NA	NA	False	NA	NA	NA	135593233	135585171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_135589189_135590350
ES.24716.1	chr4	-	3130	4	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	-18	1146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.978925926868	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTATCCCCCCCACC	NA	False	NA	NA	False	AATAAA	-15	NA	135600899	135597082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135597518_135597600_135599766_135600205_135600411_135600574
ES.24716.11	chr4	-	2004	3	FSM	ENSMUSG00000028675.13	ENSMUST00000142585.2	630	3	-3	-1371	-3	-35	multi-exon	FALSE	canonical	1	2	junction_2	185.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTCATAAATA	NA	False	NA	-37	True	NA	NA	NA	135600884	135598263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600587
ES.24716.13	chr4	-	2032	4	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	-14658	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	175.833886255055	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTCATAAATA	NA	False	NA	-37	True	NA	NA	NA	135615819	135598263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135599766_135600205_135600411_135614375_135614472_135615590
ES.24716.14	chr4	-	1616	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	26	277	26	-277	multi-exon	FALSE	canonical	3	336	junction_2	18.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAAGACTCATTTTG	NA	False	NA	NA	False	TATAAA	-34	NA	135601135	135598505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600984
ES.24716.16	chr4	-	1330	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	21	568	21	-568	multi-exon	FALSE	canonical	3	336	junction_2	18.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATGTTTTCTTAGCCT	NA	False	NA	NA	False	AATACA	-20	NA	135601140	135598796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600984
ES.24716.2	chr4	-	3723	1	Genic_Genomic	ENSMUSG00000028675.13	novel	NA	NA	NA	NA	-243	547	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGCAGCCAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	135601404	135597681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_135597700_135601400
ES.24716.3	chr4	-	2444	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	21	-546	21	546	multi-exon	FALSE	canonical	3	336	junction_2	18.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAGCCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	135601140	135597682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600984
ES.24716.4	chr4	-	2894	2	NIC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	11	546	intron_retention	FALSE	canonical	3	336	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAGCCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	135601150	135597682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135600411_135600984
ES.24716.6	chr4	-	2317	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	27	-425	27	425	multi-exon	FALSE	canonical	3	336	junction_2	18.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGACTAAGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	135601134	135597803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600984
ES.24716.7	chr4	-	1933	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	-12	-2	-12	2	multi-exon	FALSE	canonical	3	336	junction_2	18.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTTTTATGTAAGTG	NA	False	NA	0	True	AATAAA	-29	NA	135601173	135598226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135599766_135600205_135600411_135600984
ES.24716.8	chr4	-	2906	1	Genic_Genomic	ENSMUSG00000028675.13	novel	NA	NA	NA	NA	28	1	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTTTTTATGTAAGT	NA	False	NA	-1	True	AATAAA	-28	NA	135601133	135598227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_135598200_135601100
ES.24716.9	chr4	-	1795	3	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	186.5	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATTCTTTTTATGTAA	NA	False	NA	-3	True	AATAAA	-26	NA	135601168	135598229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135599766_135600205_135600411_135601114
ES.24717.1	chr4	+	176	1	Intergenic	novelGene_20376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAATTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	135617913	135618089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135617900_135618100
ES.24718.1	chr4	-	218	1	Intergenic	novelGene_20377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGCAGTGACCTGGAC	NA	False	NA	NA	False	NA	NA	NA	135626461	135626243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135626200_135626500
ES.24719.1	chr4	+	1891	2	ISM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	-27	15897	-27	-10306	5prime_fragment	FALSE	canonical	3	268	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGATTGCTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	135648018	135651725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135648462_135650277
ES.24719.10	chr4	+	4643	3	ISM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	10647	24	-5056	5prime_fragment	FALSE	canonical	3	268	junction_1	26	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTATCTCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	135648069	135656975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135648462_135650277_135650413_135652859
ES.24719.11	chr4	+	2441	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	24	60	24	-60	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGATAGGTTTCTT	NA	False	NA	NA	False	AGTAAA	-27	NA	135648069	135667562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ES.24719.12	chr4	+	3838	2	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	24	-5056	intron_retention	FALSE	non_canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTATCTCTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	135648069	135656975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135651564_135656631
ES.24719.13	chr4	+	1244	7	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	123.783412997596	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGGTCAATCTCCCA	NA	False	NA	19	True	AATAAA	-19	NA	135648073	135666599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135664272_135664334_135666384
ES.24719.14	chr4	+	1577	8	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	116.029201109911	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGGTCAATCTCCCA	NA	False	NA	19	True	AATAAA	-19	NA	135648103	135666599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666251
ES.24719.16	chr4	+	230	1	Intergenic	novelGene_20378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGCCAATAGATTGGG	NA	False	NA	NA	False	NA	NA	NA	135649711	135649941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135649700_135649900
ES.24719.17	chr4	+	3290	4	NIC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	-374	-3	intron_retention	FALSE	canonical	3	334	junction_1	19.3964487013015	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAGTGGTCAATCTCC	NA	False	NA	17	True	AATAAA	-17	NA	135656772	135666597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135657316_135660209_135660411_135662000_135664334_135666384
ES.24719.18	chr4	+	1425	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	-6	-1	-6	1	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACGTGTGTTTATGGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	135673752	135689929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.19	chr4	+	1384	9	NNC	ENSMUSG00000028672.14	novel	1418	9	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.178777115896	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAACATTCAAACGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	135673770	135689919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135673852_135677860_135677945_135679681_135679777_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.2	chr4	+	3565	7	NIC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	-20	0	intron_retention	FALSE	canonical	3	268	junction_1	37.1995370341562	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	20	True	AATAAA	-20	NA	135648025	135666600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135664334_135666384
ES.24719.20	chr4	+	4388	8	NIC	ENSMUSG00000028672.14	novel	1418	9	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	659	junction_3	78.7196005465226	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	135673771	135689924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.21	chr4	+	1535	10	NNC	ENSMUSG00000028672.14	novel	1418	9	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	331.749384808755	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATATAACATTCAAACGT	NA	False	NA	NA	False	ATTAAA	-12	NA	135673777	135689917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135673852_135676011_135676159_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.22	chr4	+	852	7	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	24	2359	7	-650	5prime_fragment	FALSE	canonical	3	659	junction_3	76.8889892420668	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGCCACAGATGGCGG	NA	False	NA	NA	False	AATAAA	-18	NA	135673782	135687569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287
ES.24719.23	chr4	+	1185	7	NIC	ENSMUSG00000028672.14	novel	1418	9	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	304.184520023985	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	135673783	135689924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135673852_135677860_135677945_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.3	chr4	+	1510	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	-6	1021	-6	1	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGGTCAATCTCCCAAG	NA	False	NA	21	True	AATAAA	-21	NA	135648039	135666601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ES.24719.4	chr4	+	3686	1	Genic_Genomic	ENSMUSG00000028673.11	novel	NA	NA	NA	NA	-6	-10306	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGATTGCTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	135648039	135651725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_135648000_135651700
ES.24719.5	chr4	+	2739	16	Fusion	ENSMUSG00000028672.14_ENSMUSG00000028673.11	novel	2525	8	NA	NA	1	-4	multi-exon	FALSE	canonical	2	13	junction_8	263.348404632005	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCAAACGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	135648046	135689924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384_135666517_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ES.24719.6	chr4	+	3510	7	NNC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	6	-1	intron_retention	FALSE	canonical	3	9	junction_2	126.255032902983	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGGTCAATCTCCCA	NA	False	NA	19	True	AATAAA	-19	NA	135648051	135666599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135648462_135650277_135650385_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135664334_135666384
ES.24719.7	chr4	+	3134	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	6	-615	6	615	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTATTTTTGTTCT	NA	False	NA	NA	False	AATATA	-15	NA	135648051	135668237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ES.24719.8	chr4	+	1439	8	NIC	ENSMUSG00000028673.11	novel	2525	8	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	120.781806982505	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGGTCAATCTCCCA	NA	False	NA	19	True	AATAAA	-19	NA	135648058	135666599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664283_135664334_135666384
ES.2472.1	chr10	-	160	1	Intergenic	novelGene_1877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	23812641	23812481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_23812500_23812600
ES.24720.1	chr4	-	5024	1	Antisense	novelGene_ENSMUSG00000028673.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	135664844	135659820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_135659800_135664800
ES.24721.1	chr4	-	174	1	Intergenic	novelGene_20379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135684710	135684536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135684500_135684700
ES.24722.1	chr4	+	1468	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	-36	-2	-36	2	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTCACAGATGGCCA	4526	False	NA	13	True	AATAAA	-21	NA	135691001	135695491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ES.24722.2	chr4	+	1508	11	NIC	ENSMUSG00000028671.17	novel	1430	11	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	48.5469875481476	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGCAGATTCTCACAGA	4588	False	NA	7	True	AATAAA	-15	NA	135691063	135695485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135691100_135692536_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ES.24722.3	chr4	+	1667	10	NIC	ENSMUSG00000028671.17	novel	1430	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	107	junction_1	19.5959179422654	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAGATTCTCACAGAT	4588	False	NA	8	True	AATAAA	-16	NA	135691063	135695486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ES.24722.5	chr4	+	1810	11	NNC	ENSMUSG00000028671.17	novel	1430	11	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_2	71.6827036320478	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAGATTCTCACAGAT	4590	False	NA	8	True	AATAAA	-16	NA	135691065	135695486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135691100_135692536_135692566_135692644_135692768_135692876_135692993_135693313_135693428_135693564_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ES.24722.8	chr4	+	1482	11	NNC	ENSMUSG00000028671.17	novel	1537	10	NA	NA	-464	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.1350180624776	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGATTCTCACAGATGG	5536	False	NA	10	True	AATAAA	-18	NA	135692011	135695488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135692127_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ES.24722.9	chr4	+	2205	5	NIC	ENSMUSG00000028671.17	novel	1537	10	NA	NA	169	-3	intron_retention	FALSE	canonical	3	149	junction_4	8.20060973342836	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAGATTCTCACAGAT	6199	False	NA	8	True	AATAAA	-16	NA	135692674	135695486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135692768_135692876_135692993_135693313_135694238_135694322_135694390_135694481
ES.24723.1	chr4	-	4361	10	NNC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	0	2735	intron_retention	TRUE	canonical	1	1	junction_6	143.724358958475	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCACTGATTCGTACCC	NA	False	NA	NA	False	NA	NA	NA	135699914	135692799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697341_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.10	chr4	-	2016	7	NIC	ENSMUSG00000028670.15	novel	1119	9	NA	NA	-2	-8	intron_retention	FALSE	canonical	3	407	junction_1	27.3780122645081	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	False	NA	-19	True	ATTAAA	-12	NA	135699916	135695542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696379_135696454_135696629_135696738_135697185_135697269_135697318_135697764_135697831_135697918_135698277_135699828
ES.24723.11	chr4	-	1460	11	NNC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.42037694607	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTCAGGGCTCCCTTA	NA	False	NA	-20	True	ATTAAA	-11	NA	135699900	135695543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135696086_135696205_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.12	chr4	-	1713	9	NNC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-7	-10	intron_retention	FALSE	canonical	0	0	junction_1	153.378973053675	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGGGCTCCCTT	NA	False	NA	-21	True	ATTAAA	-10	NA	135699921	135695544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135696666_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.13	chr4	-	1908	7	NIC	ENSMUSG00000028670.15	novel	1119	9	NA	NA	-17	-10	intron_retention	FALSE	canonical	3	430	junction_1	19.2844208854943	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGGGCTCCCTT	NA	False	NA	-21	True	ATTAAA	-10	NA	135699954	135695544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696629_135696738_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.3	chr4	-	1627	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	-2	1	-2	-1	multi-exon	FALSE	canonical	3	407	junction_1	24.7476149243608	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTCCCTTATGTGGTAC	NA	False	NA	-12	True	ATTAAA	-19	NA	135699939	135695535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.4	chr4	-	1688	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	-10	-1	intron_retention	TRUE	canonical	3	428	junction_2	20.3127884594902	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTCCCTTATGTGGTAC	NA	False	NA	-12	True	ATTAAA	-19	NA	135699924	135695535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.5	chr4	-	1613	10	NNC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	144.651134172131	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGGGCTCCCTTATGTG	NA	False	NA	-16	True	ATTAAA	-15	NA	135699907	135695539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135696379_135696454_135696629_135696738_135696863_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.6	chr4	-	1717	9	NIC	ENSMUSG00000028670.15	novel	1626	10	NA	NA	6	-8	intron_retention	FALSE	canonical	3	407	junction_1	26.2485118625799	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	False	NA	-19	True	ATTAAA	-12	NA	135699908	135695542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.7	chr4	-	1797	8	NIC	ENSMUSG00000028670.15	novel	1119	9	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	407	junction_1	26.4235516468293	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	False	NA	-19	True	ATTAAA	-12	NA	135699917	135695542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696379_135696454_135696629_135696738_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24723.8	chr4	-	1761	8	NIC	ENSMUSG00000028670.15	novel	1119	9	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	407	junction_1	21.8958574033668	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	False	NA	-19	True	ATTAAA	-12	NA	135699921	135695542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697951_135698170_135698277_135699828
ES.24723.9	chr4	-	1666	9	FSM	ENSMUSG00000028670.15	ENSMUST00000145350.2	1119	9	-15	-532	0	-8	multi-exon	FALSE	canonical	3	407	junction_1	24.7474746186353	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	False	NA	-19	True	ATTAAA	-12	NA	135699914	135695542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ES.24724.1	chr4	+	178	1	Intergenic	novelGene_20380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTTATTATGTG	NA	False	NA	NA	False	NA	NA	NA	135711295	135711473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135711300_135711500
ES.24725.1	chr4	-	1648	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	55	-3	55	3	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTCAGCCTCTGCATT	2170	False	NA	0	True	AATAAA	-22	NA	135714520	135702767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ES.24725.2	chr4	-	1602	6	NIC	ENSMUSG00000028669.16	novel	1700	6	NA	NA	30	-138	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	215.572168890142	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTCTTCTGTGCTCT	2145	False	NA	3	True	AATAAA	-20	NA	135714545	135702908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714178
ES.24725.3	chr4	-	1569	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	-13	144	-13	-144	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTCTTTTCTTCTG	2102	False	NA	-3	True	AATAAA	-14	NA	135714588	135702914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ES.24725.4	chr4	-	1520	6	NNC	ENSMUSG00000028669.16	novel	1700	6	NA	NA	30	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	218.350727042527	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTCTTTTCTTCTG	2145	False	NA	-3	True	AATAAA	-14	NA	135714545	135702914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713741_135714248
ES.24725.5	chr4	-	3248	7	NNC	ENSMUSG00000028669.16	novel	1700	6	NA	NA	48	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	250.0004999995	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTCTTTTCTTCTG	2163	False	NA	-3	True	AATAAA	-14	NA	135714527	135702914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135703808_135704459_135704569_135706107_135707295_135711783_135712379_135713188_135713330_135713702_135713747_135714248
ES.24725.7	chr4	-	1090	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	30	580	30	26	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGGAATCCTTCTGAAAC	2145	False	NA	NA	False	AAAAAG	-15	NA	135714545	135703350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ES.24725.8	chr4	-	2832	3	ISM	ENSMUSG00000028669.16	ENSMUST00000133438.2	626	4	-157	4990	26	2882	5prime_fragment	FALSE	canonical	3	496	junction_1	1.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTGTCTCTGTGGAA	2141	False	NA	NA	False	NA	NA	NA	135714549	135710842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135713330_135713702_135713747_135714248
ES.24726.1	chr4	+	178	1	Intergenic	novelGene_20381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7647	False	NA	NA	False	NA	NA	NA	135735800	135735978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135735800_135736000
ES.24727.1	chr4	+	168	1	Intergenic	novelGene_20382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTCTAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135744698	135744866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135744700_135744900
ES.24728.1	chr4	-	5080	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	104	-476	104	476	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTTTAATTGCTTCT	7808	False	NA	NA	False	NA	NA	NA	135748970	135730202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24728.2	chr4	-	4730	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	-21	-1	-21	1	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGCCTTTCCTCATT	7683	False	NA	0	True	AATAAA	-18	NA	135749095	135730677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24728.3	chr4	-	2648	10	NIC	ENSMUSG00000028668.6	novel	4708	11	NA	NA	136	-1809	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	47.6929479477901	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTCCTGGGTCAGCT	7840	False	NA	NA	False	ATTAAA	-24	NA	135748938	135732487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24728.4	chr4	-	2894	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	2	1812	2	-1812	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTCTTGTCCTGGGTCA	7706	False	NA	NA	False	ATTAAA	-21	NA	135749072	135732490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24728.5	chr4	-	2747	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	34	1927	34	-1927	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCAGGGTTTTTTGTTT	7738	False	NA	-11	True	AATAAA	-26	NA	135749040	135732605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24728.7	chr4	-	3544	11	NNC	ENSMUSG00000028668.6	novel	4708	11	NA	NA	112	-1943	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.9242855143115	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGTATTTATAATAACC	7816	False	NA	-27	True	AATAAA	-10	NA	135748962	135732621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735762_135735955_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ES.24729.1	chr4	+	173	1	Intergenic	novelGene_20383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGAGAGGGGGA	1249	False	NA	NA	False	NA	NA	NA	135761005	135761178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135761000_135761200
ES.2473.1	chr10	+	2203	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-31	1263	-6	-2	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGTCCCAAGAACT	NA	False	NA	21	True	AATAAA	-23	NA	24025193	24064857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.10	chr10	+	3689	2	NIC	ENSMUSG00000019998.7	novel	2502	10	NA	NA	29591	-677	intron_retention	FALSE	canonical	3	203	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGTGTATGTATATA	8546	False	NA	14	True	AATAAA	-15	NA	24057935	24064182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24060968_24063525
ES.2473.11	chr10	+	2926	1	NIC	ENSMUSG00000019998.7	novel	2502	10	NA	NA	32908	-681	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTGATGTGTATGTA	NA	False	NA	10	True	AATAAA	-11	NA	24061252	24064178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24061300_24064200
ES.2473.2	chr10	+	2177	10	NNC	ENSMUSG00000019998.7	novel	2502	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	68.0834636654993	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGTCCCAAGAACT	NA	False	NA	21	True	AATAAA	-23	NA	24025213	24064857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24025301_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.3	chr10	+	1502	10	NNC	ENSMUSG00000019998.7	novel	2502	10	NA	NA	-1	-677	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	68.0834636654993	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGTGTATGTATATA	NA	False	NA	14	True	AATAAA	-15	NA	24025213	24064182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24025301_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.4	chr10	+	1330	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-9	2114	1	-853	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAGCCCAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	24025215	24064006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.5	chr10	+	1506	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	-9	1938	1	-677	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGTGTATGTATATA	NA	False	NA	14	True	AATAAA	-15	NA	24025215	24064182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.6	chr10	+	3351	2	FSM	ENSMUSG00000019998.7	ENSMUST00000218050.2	723	2	32	-2660	7	2660	multi-exon	FALSE	canonical	3	218	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAGATGGTCCTTCGT	NA	False	NA	NA	False	NA	NA	NA	24025231	24034408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24025307_24031132
ES.2473.7	chr10	+	2285	10	NNC	ENSMUSG00000019998.7	novel	3435	10	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.0996910071514	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGTCCCAAGAACT	NA	False	NA	21	True	AATAAA	-23	NA	24025237	24064857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24025307_24031132_24031283_24052933_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060888_24060968_24063525
ES.2473.8	chr10	+	3421	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	13	1	-13	-1	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTAGAATTGCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	24025237	24066119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ES.2473.9	chr10	+	3627	9	NIC	ENSMUSG00000019998.7	novel	3435	10	NA	NA	-11	-677	intron_retention	FALSE	canonical	3	188	junction_6	15.003645390371	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGTGTATGTATATA	NA	False	NA	14	True	AATAAA	-15	NA	24025239	24064182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24060968_24063525
ES.24730.1	chr4	+	182	1	Intergenic	novelGene_20384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTGTTTG	4845	False	NA	NA	False	NA	NA	NA	135764601	135764783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135764600_135764800
ES.24731.1	chr4	+	177	1	Intergenic	novelGene_20385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAATTATTTAT	6562	False	NA	NA	False	NA	NA	NA	135766318	135766495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135766300_135766500
ES.24732.1	chr4	+	173	1	Intergenic	novelGene_20386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCAGCATGAA	NA	False	NA	NA	False	NA	NA	NA	135769828	135770001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135769800_135770000
ES.24733.1	chr4	-	889	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	-6	-50	-6	50	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCAGGTGTCCCTTGTTTG	NA	False	NA	-9	True	NA	NA	NA	135780710	135776991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ES.24733.11	chr4	-	3474	1	Genic_Genomic	ENSMUSG00000059291.16	novel	NA	NA	NA	NA	4	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTACAGTTGTGTGT	NA	False	NA	-8	True	AATAAA	-36	NA	135780735	135777261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_135777300_135780700
ES.24733.12	chr4	-	584	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	22	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	3931.64614887963	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTTACAGTTGTG	NA	False	NA	-11	True	AATAAA	-33	NA	135780682	135777264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135777328_135777590_135777702_135778481_135778605_135778915_135779028_135779877_135780029_135780658
ES.24733.13	chr4	-	1666	4	NIC	ENSMUSG00000059291.16	novel	807	5	NA	NA	-43	-7	intron_retention	FALSE	canonical	3	383	junction_1	4956.68574307022	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTTACAGTTGTG	NA	False	NA	-11	True	AATAAA	-33	NA	135780350	135777264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135777328_135777590_135778614_135778924_135779032_135779877
ES.24733.15	chr4	-	3110	2	ISM	ENSMUSG00000059291.16	ENSMUST00000128733.2	397	4	54	-1287	19	-7	intron_retention	FALSE	canonical	3	10574	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATGTTACAGTTGTG	NA	False	NA	-11	True	AATAAA	-33	NA	135780685	135777264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_135778614_135778924
ES.24733.16	chr4	-	1446	5	NIC	ENSMUSG00000059291.16	novel	833	6	NA	NA	9	-8	intron_retention	FALSE	canonical	3	383	junction_1	3906.64007652356	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCATGTTACAGTTGT	NA	False	NA	-12	True	AATAAA	-32	NA	135780695	135777265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135780029_135780658
ES.24733.17	chr4	-	467	5	NIC	ENSMUSG00000059291.16	novel	833	6	NA	NA	9	-9	combination_of_known_splicesites	FALSE	canonical	3	383	junction_1	4521.87916551294	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCATGTTACAGTTG	NA	False	NA	-13	True	AATAAA	-31	NA	135780695	135777266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135777328_135777590_135777702_135778924_135779032_135779877_135780029_135780658
ES.24733.18	chr4	-	575	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	21	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4821.82436843152	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCATGTTACAGTTG	NA	False	NA	-13	True	AATAAA	-31	NA	135780683	135777266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135777328_135777590_135777686_135778477_135778614_135778924_135779032_135779877_135780029_135780658
ES.24733.2	chr4	-	719	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	-98	212	-63	4	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTGTGTTTGTGAAA	NA	False	NA	0	True	AATAAA	-44	NA	135780802	135777253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ES.24733.4	chr4	-	701	6	NIC	ENSMUSG00000059291.16	novel	622	5	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	4990.53135447519	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACAGTTGTGTGTTTG	NA	False	NA	-5	True	AATAAA	-39	NA	135780411	135777258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780280
ES.24733.6	chr4	-	772	6	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5002.5285446462	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACAGTTGTGTGTTTG	NA	False	NA	-5	True	AATAAA	-39	NA	135780667	135777258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780465
ES.24734.1	chr4	-	172	1	Intergenic	novelGene_20387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	135787858	135787686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135787700_135787900
ES.24735.1	chr4	+	199	1	Intergenic	novelGene_20388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTAAATTTAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	135829290	135829489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135829300_135829500
ES.24736.1	chr4	+	2055	1	Genic_Genomic	ENSMUSG00000007872.4	novel	NA	NA	NA	NA	-40	123	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCTCTTGAGTTTGAAA	732	False	NA	NA	False	NA	NA	NA	135871134	135873189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_135871100_135873200
ES.24736.2	chr4	+	949	3	FSM	ENSMUSG00000007872.4	ENSMUST00000008016.3	1278	3	327	2	-40	-2	multi-exon	FALSE	canonical	3	22	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGACATCTTGCGCC	732	False	NA	9	True	AATAAA	-17	NA	135871134	135872701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135871490_135871604_135871688_135872190
ES.24737.1	chr4	-	152	1	Intergenic	novelGene_20389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAACAAAGGAG	6522	False	NA	NA	False	NA	NA	NA	135891967	135891815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135891800_135892000
ES.24738.1	chr4	+	4891	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-149	-3	-149	3	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTGATTTCTTT	907	False	NA	19	True	ATTAAA	-23	NA	135899555	135923371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.12	chr4	+	1534	6	NIC	ENSMUSG00000018983.10	novel	4739	7	NA	NA	402	-2697	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.3632189562997	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAGTTCAGATGTGTT	1458	False	NA	NA	False	NA	NA	NA	135900106	135920671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135900350_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.13	chr4	+	2691	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	417	1631	417	-1631	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGAAGTTGGCTATG	1473	False	NA	NA	False	ATTAAA	-8	NA	135900121	135921737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.14	chr4	+	3744	6	ISM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	4771	1621	-3618	-1621	3prime_fragment	FALSE	canonical	1	25	junction_3	13.1666244725062	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCTATGCCAGGTAGGT	5827	False	NA	NA	False	ATTAAA	-18	NA	135904475	135921747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.15	chr4	+	4386	6	ISM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	5747	3	-2642	-3	3prime_fragment	FALSE	canonical	1	25	junction_3	13.1666244725062	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTCTTGGTGTGAT	6803	False	NA	13	True	ATTAAA	-17	NA	135905451	135923365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.16	chr4	+	3919	2	ISM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	13977	3	5588	-3	3prime_fragment	FALSE	canonical	3	57	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTCTTGGTGTGAT	1814	False	NA	13	True	ATTAAA	-17	NA	135913681	135923365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135914303_135920067
ES.24738.4	chr4	+	4814	7	NNC	ENSMUSG00000018983.10	novel	4739	7	NA	NA	-119	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.4294708805939	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAACTTTGTCTTGGTGTG	937	False	NA	11	True	ATTAAA	-15	NA	135899585	135923363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135900350_135905746_135905853_135907668_135907889_135908635_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.5	chr4	+	2161	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-119	2697	-119	-2697	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAGTTCAGATGTGTT	937	False	NA	NA	False	NA	NA	NA	135899585	135920671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.6	chr4	+	3515	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-119	1343	-119	-1343	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCTCAT	937	False	NA	NA	False	NA	NA	NA	135899585	135922025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.7	chr4	+	4749	6	NIC	ENSMUSG00000018983.10	novel	4739	7	NA	NA	-119	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.3632189562997	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTCTTGGTGTGAT	937	False	NA	13	True	ATTAAA	-17	NA	135899585	135923365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135900350_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.8	chr4	+	4142	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-119	716	-119	-716	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGAGTGGTATGTCT	937	False	NA	NA	False	TTTAAA	-28	NA	135899585	135922652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ES.24738.9	chr4	+	4287	6	ISM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	-119	6336	-119	2914	5prime_fragment	FALSE	canonical	1	25	junction_4	12.5123938556936	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCAGAGGGCAACTGC	937	False	NA	NA	False	NA	NA	NA	135899585	135917032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109
ES.24739.1	chr4	+	3918	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	0	307	0	-307	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCATCTCATTCTT	1322	False	NA	14	True	AAAACA	-26	NA	135933675	135972220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.10	chr4	+	4195	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	31	-1	31	1	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTGGTGATTGGAAAGT	1353	False	NA	NA	False	NA	NA	NA	135933706	135972528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.11	chr4	+	4294	26	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3560556532627	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTAGGGTTCTGGTGAT	1355	False	NA	NA	False	NA	NA	NA	135933708	135972520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135934630_135934740_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.12	chr4	+	3879	25	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	38	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.49085817452189	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAACTTGTGTTCATCT	1360	False	NA	7	True	AAAACA	-19	NA	135933713	135972213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961888_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.13	chr4	+	3860	24	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	56	-309	intron_retention	FALSE	canonical	1	2	junction_21	9.26382888010399	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTTCATCTCATTC	1378	False	NA	12	True	AAAACA	-24	NA	135933731	135972218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968577_135968683_135968799_135969966_135970193_135970758_135970853_135971099
ES.24739.14	chr4	+	4484	23	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	56	-2	intron_retention	FALSE	canonical	0	0	junction_18	9.71377568283975	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTTCTGGTGATTGGAA	1378	False	NA	NA	False	NA	NA	NA	135933731	135972525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968249_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.15	chr4	+	3485	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	56	684	56	-684	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGGATGGTCTGGGTT	1378	False	NA	NA	False	NA	NA	NA	135933731	135971843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.16	chr4	+	3830	25	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	57	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.46695642162194	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAACTTGTGTTCATCT	1379	False	NA	7	True	AAAACA	-19	NA	135933732	135972213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135954996_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.17	chr4	+	4648	22	NIC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	57	-309	intron_retention	FALSE	canonical	3	23	junction_9	6.72828665187812	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTTCATCTCATTC	1379	False	NA	12	True	AAAACA	-24	NA	135933732	135972218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.18	chr4	+	4023	24	NIC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	60	-311	intron_retention	FALSE	canonical	3	23	junction_9	6.65856470509577	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGTGTTCATCTCAT	1382	False	NA	10	True	AAAACA	-22	NA	135933735	135972216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.19	chr4	+	3894	25	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	60	-307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.49085817452189	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCATCTCATTCTT	1382	False	NA	14	True	AAAACA	-26	NA	135933735	135972220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961858_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.2	chr4	+	3168	24	NIC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	2	-1136	intron_retention	FALSE	canonical	3	23	junction_10	6.51158630010133	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAGGATTGTGTTTCTC	1324	False	NA	NA	False	NA	NA	NA	135933677	135971391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.20	chr4	+	3658	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	77	490	77	-490	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACAGCTCTGTTTCACA	1399	False	NA	NA	False	NA	NA	NA	135933752	135972037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.21	chr4	+	3715	25	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	117	-312	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	9.24201983094364	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTTGTGTTCATCTCA	1439	False	NA	9	True	AAAACA	-21	NA	135933792	135972215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968799_135969966_135970193_135970758_135970853_135971099
ES.24739.22	chr4	+	180	1	Intergenic	novelGene_20392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAGAAATACCTC	5340	False	NA	NA	False	NA	NA	NA	135953761	135953941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135953800_135953900
ES.24739.23	chr4	+	3421	22	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	22627	-309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0984247770595	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTTCATCTCATTC	7881	False	NA	12	True	AAAACA	-24	NA	135956302	135972218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135956414_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135961976_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.24	chr4	+	156	1	Intergenic	novelGene_20393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	8604	False	NA	NA	False	NA	NA	NA	135957025	135957181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_135957000_135957200
ES.24739.25	chr4	+	2976	16	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	29702	-307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.145341380124	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCATCTCATTCTT	4791	False	NA	14	True	AAAACA	-26	NA	135963377	135972220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135963438_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967332_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.26	chr4	+	2948	16	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	29769	-311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5291130786131	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGTGTTCATCTCAT	4858	False	NA	10	True	AAAACA	-22	NA	135963444	135972216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135963577_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.3	chr4	+	4290	25	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	6	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	9.42035326065618	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAAGAGTTTTCTTTG	1328	False	NA	NA	False	NA	NA	NA	135933681	135972502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967332_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.5	chr4	+	4148	24	ISM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	11	313	11	-313	intron_retention	FALSE	canonical	3	23	junction_10	6.45677791908691	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAACTTGTGTTCATCTC	1333	False	NA	8	True	AAAACA	-20	NA	135933686	135972214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758
ES.24739.6	chr4	+	3980	24	NNC	ENSMUSG00000036995.8	novel	4225	25	NA	NA	22	-311	intron_retention	FALSE	canonical	1	2	junction_21	9.39110305742412	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGTGTTCATCTCAT	1344	False	NA	10	True	AAAACA	-22	NA	135933697	135972216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968799_135969966_135970193_135970758_135970853_135971099
ES.24739.7	chr4	+	3086	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	26	1113	26	-1113	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCGTGGGACCCGTTCT	1348	False	NA	NA	False	NA	NA	NA	135933701	135971414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.24739.9	chr4	+	5555	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	28	-1358	28	1358	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTCCTTCAAGCTTCT	1350	False	NA	NA	False	AATAAA	-16	NA	135933703	135973885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ES.2474.1	chr10	+	649	1	NIC	ENSMUSG00000020000.8	novel	3090	12	NA	NA	-11	-7017	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGCTTTTGAGACCTA	NA	False	NA	NA	False	NA	NA	NA	24099431	24100080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24099400_24100100
ES.2474.2	chr10	+	2960	12	NNC	ENSMUSG00000020000.8	novel	3090	12	NA	NA	1	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.22643068756655	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCCACTTTAAGCCC	NA	False	NA	NA	False	AATAAA	-17	NA	24099443	24178599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24099766_24120137_24120285_24128360_24128529_24128829_24128914_24155263_24155444_24155740_24155844_24157315_24157483_24158460_24158653_24160653_24160702_24162904_24163048_24176053_24176223_24177362
ES.24740.1	chr4	-	181	1	Intergenic	novelGene_20390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAACACAGA	4743	False	NA	NA	False	NA	NA	NA	135941630	135941449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135941400_135941600
ES.24741.1	chr4	-	176	1	Intergenic	novelGene_20391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	135953102	135952926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135952900_135953100
ES.24742.1	chr4	+	1280	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCTGAGCCCTGGA	6574	False	NA	14	True	AATAAA	-25	NA	135975233	136002208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.10	chr4	+	1277	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	-8	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	302.350392756484	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6616	False	NA	-19	True	NA	NA	NA	135975275	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981954_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.11	chr4	+	4176	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	-4	2947	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	301.395836069445	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTATAGTGTTGTGTT	6620	False	NA	NA	False	NA	NA	NA	135975279	136005156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000960_136001027_136002090
ES.24742.12	chr4	+	4174	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	1	2944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGTTATAGTGTTGT	6625	False	NA	NA	False	NA	NA	NA	135975284	136005153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.13	chr4	+	1851	10	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	2	-34	intron_retention	FALSE	non_canonical	0	0	junction_6	241.906675199699	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6626	False	NA	-19	True	NA	NA	NA	135975285	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.14	chr4	+	7335	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	5	-34	intron_retention	FALSE	non_canonical	0	0	junction_1	350.079762339956	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6629	False	NA	-19	True	NA	NA	NA	135975288	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135978228_135978330_135980737_135980774_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.15	chr4	+	1311	12	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	12	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	338.008680019604	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6636	False	NA	-19	True	NA	NA	NA	135975295	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135978566_135978693_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.17	chr4	+	1259	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	307.780457469281	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCTGAGCCCTGGA	6637	False	NA	14	True	AATAAA	-25	NA	135975296	136002208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975471_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.19	chr4	+	1571	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	13	4876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.967104466882	261	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTAAAAAAAAAACCTAGG	6637	False	NA	NA	False	NA	NA	NA	135975296	136007085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975471_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136006655
ES.24742.20	chr4	+	3858	10	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	13	5	intron_retention	FALSE	non_canonical	0	0	junction_6	244.176519836585	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	6637	False	NA	20	True	AATAAA	-31	NA	135975296	136002214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.22	chr4	+	1337	11	NNC	ENSMUSG00000001604.15	novel	896	9	NA	NA	439	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	307.780457469281	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	7063	False	NA	-19	True	NA	NA	NA	135975722	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135976008_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.23	chr4	+	2519	8	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	7230	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	270.70580461649	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGCCCTGGATGAGGC	NA	False	NA	20	True	AATAAA	-31	NA	135982513	136002214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135982600_135985234_135985298_135991757_135991922_135992182_135993495_135994923_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.3	chr4	+	1314	12	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	-9	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	340.50366195043	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6594	False	NA	-19	True	NA	NA	NA	135975253	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135990482_135990570_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.4	chr4	+	1306	7	ISM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	-8	9430	-8	984	5prime_fragment	FALSE	canonical	3	647	junction_4	43.1972221329104	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGGCTTGCCAGAACT	6595	False	NA	NA	False	TATAAA	-35	NA	135975254	135992779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182
ES.24742.5	chr4	+	1252	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCTGAGCCCTGGA	6600	False	NA	14	True	AATAAA	-25	NA	135975259	136002208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992245_135995325_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.6	chr4	+	1211	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	1	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	301.395836069445	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	6604	False	NA	-19	True	NA	NA	NA	135975263	136002175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000960_136001027_136002090
ES.24742.7	chr4	+	2161	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	2	911	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCATGTGTGGCA	6605	False	NA	NA	False	NA	NA	NA	135975264	136003120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24742.9	chr4	+	4296	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	8	3052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.929816970565	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	6611	False	NA	NA	False	TTTAAA	-22	NA	135975270	136005261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ES.24743.1	chr4	-	183	1	Intergenic	novelGene_20394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTGTGGTGT	7531	False	NA	NA	False	NA	NA	NA	135980565	135980382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135980400_135980600
ES.24744.1	chr4	-	1869	1	Intergenic	novelGene_20395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3536	False	NA	NA	False	NA	NA	NA	135984560	135982691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_135982700_135984600
ES.24745.1	chr4	-	180	1	Intergenic	novelGene_20396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	993	False	NA	NA	False	NA	NA	NA	136009546	136009366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136009400_136009500
ES.24746.1	chr4	+	4451	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	-56	-3604	-19	-90	multi-exon	FALSE	canonical	3	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTATCTTGGTAA	NA	False	NA	17	True	ATTAAA	-23	NA	136013358	136021163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014499_136014627_136017273
ES.24746.2	chr4	+	4544	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	1	94	1	-94	multi-exon	FALSE	canonical	2	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACTGAGTTATCTTG	NA	False	NA	13	True	ATTAAA	-19	NA	136013378	136021159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014382_136014627_136017273
ES.24746.3	chr4	+	3702	4	NNC	ENSMUSG00000051351.15	novel	791	3	NA	NA	1	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.36357401145817	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTATCTTGGTAA	NA	False	NA	17	True	ATTAAA	-23	NA	136013378	136021163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136013793_136014499_136014627_136017273_136019888_136020616
ES.24746.4	chr4	+	3435	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	-15	-2629	-15	-1065	multi-exon	FALSE	canonical	3	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAAGCCCAGTGCTTTC	NA	False	NA	NA	False	AAGAAA	-33	NA	136013399	136020188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014499_136014627_136017273
ES.24746.5	chr4	+	2924	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	23	1692	-14	-1692	multi-exon	FALSE	canonical	2	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGAAGTCATAATCAG	NA	False	NA	NA	False	AGTAAA	-19	NA	136013400	136019561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014382_136014627_136017273
ES.24746.6	chr4	+	3520	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	23	1096	-14	-1096	multi-exon	FALSE	canonical	2	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTTGTTAAAGTTCTT	NA	False	NA	NA	False	AAGAAA	-2	NA	136013400	136020157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014382_136014627_136017273
ES.24746.7	chr4	+	2800	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	-4	-2005	-4	-1689	multi-exon	FALSE	canonical	3	10	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGTCATAATCAGCAT	NA	False	NA	NA	False	AGTAAA	-22	NA	136013410	136019564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136013793_136014499_136014627_136017273
ES.24747.1	chr4	-	178	1	Intergenic	novelGene_20397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGTAGGGGC	94	False	NA	NA	False	NA	NA	NA	136028778	136028600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136028600_136028800
ES.24748.1	chr4	+	173	1	Intergenic	novelGene_20398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAATTCAA	NA	False	NA	NA	False	NA	NA	NA	136031947	136032120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136031900_136032100
ES.24749.1	chr4	+	3248	10	NIC	ENSMUSG00000066037.15	novel	2647	10	NA	NA	-43	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	209.106033708579	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTCAAATTCAATTG	NA	False	NA	31	True	AATAAA	-25	NA	136038209	136067991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136039059_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.10	chr4	+	3446	12	NNC	ENSMUSG00000066037.15	novel	21452	11	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	233.891229929676	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACCTATTTCAAATTC	NA	False	NA	26	True	AATAAA	-20	NA	136038280	136067986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136039059_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136049250_136049361_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.11	chr4	+	2549	10	NNC	ENSMUSG00000066037.15	novel	2543	10	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	188.110487627765	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	False	NA	23	True	AATAAA	-17	NA	136038281	136067983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136043671_136043791_136044350_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.12	chr4	+	2691	11	NNC	ENSMUSG00000066037.15	novel	21452	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	201.022411685862	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTCAAATTCAATTG	NA	False	NA	31	True	AATAAA	-25	NA	136038281	136067991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059699_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.13	chr4	+	3337	11	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	170.449083306423	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTCAAATTCAATTG	NA	False	NA	31	True	AATAAA	-25	NA	136038281	136067991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136039059_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.17	chr4	+	4630	10	NIC	ENSMUSG00000066037.15	novel	21452	11	NA	NA	9	-5	intron_retention	FALSE	canonical	3	84	junction_3	189.050714993375	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACCTATTTCAAATTCA	NA	False	NA	27	True	AATAAA	-21	NA	136038287	136067987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136038401_136041397_136041567_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.18	chr4	+	2617	11	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	213.458286323113	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTCAAATTCAATTG	NA	False	NA	31	True	AATAAA	-25	NA	136038287	136067991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136049250_136049361_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.2	chr4	+	2710	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	-24	18766	2	0	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038254	136067992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.21	chr4	+	4455	9	NIC	ENSMUSG00000066037.15	novel	2543	10	NA	NA	9	-6	intron_retention	FALSE	canonical	3	289	junction_1	103.204817595886	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACCTATTTCAAATTC	NA	False	NA	26	True	AATAAA	-20	NA	136038287	136067986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.23	chr4	+	5399	9	NIC	ENSMUSG00000066037.15	novel	2543	10	NA	NA	9	-5	intron_retention	FALSE	canonical	3	289	junction_1	101.319729075832	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACCTATTTCAAATTCA	NA	False	NA	27	True	AATAAA	-21	NA	136038287	136067987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.25	chr4	+	2792	12	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	211.878805214617	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACCTATTTCAAATTC	NA	False	NA	26	True	AATAAA	-20	NA	136038291	136067986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136040346_136040475_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.26	chr4	+	5278	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	15	-2610	15	325	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGTTTGTAAATTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	136038293	136070602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.27	chr4	+	2781	12	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	227.860911613472	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTATTTCAAATTCAATTG	NA	False	NA	31	True	AATAAA	-25	NA	136038294	136067991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136041400_136041567_136043671_136043796_136044394_136044503_136046704_136046819_136049250_136049361_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.29	chr4	+	3511	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	18	-846	18	664	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCTGTTCCTGTTTGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	136038296	136068838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.30	chr4	+	2210	8	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	23	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	204.384691307388	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	False	NA	23	True	AATAAA	-17	NA	136038301	136067983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136041400_136041567_136043671_136043749_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.31	chr4	+	3320	11	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	216.738759800826	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	29	True	AATAAA	-23	NA	136038303	136067989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136039059_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054731_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.32	chr4	+	3321	11	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	222.028128848576	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038307	136067992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136039059_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059699_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.35	chr4	+	3908	10	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	-23	-3	intron_retention	FALSE	canonical	1	8	junction_1	178.87246301399	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	29	True	AATAAA	-23	NA	136038312	136067989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136039059_136041400_136041567_136043671_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.38	chr4	+	3036	11	NNC	ENSMUSG00000066037.15	novel	980	7	NA	NA	184	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	239.853309337186	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACCTATTTCAAATTCA	NA	False	NA	27	True	AATAAA	-21	NA	136038522	136067987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136039059_136043671_136043791_136044394_136044503_136046704_136046819_136049250_136049361_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.4	chr4	+	2538	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	17	-12	-9	12	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGTGTCTAAAACATT	NA	False	NA	44	True	AATAAA	-38	NA	136038269	136068004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.40	chr4	+	2386	9	ISM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	5391	11	4674	-11	3prime_fragment	FALSE	canonical	3	458	junction_5	59.9842427225684	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACATCACCTATTTCA	NA	False	NA	21	True	AATAAA	-15	NA	136043669	136067981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.41	chr4	+	2446	1	Intergenic	novelGene_20400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136051597	136054043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136051600_136054000
ES.24749.42	chr4	+	662	1	Intergenic	novelGene_20399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	136051597	136052259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136051600_136052300
ES.24749.43	chr4	+	2047	6	ISM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	16266	9	-8839	-9	3prime_fragment	FALSE	canonical	3	458	junction_2	57.3515474943789	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	False	NA	23	True	AATAAA	-17	NA	136054544	136067983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.44	chr4	+	11277	4	ISM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	21576	9084	-3529	7397	3prime_fragment	FALSE	canonical	3	464	junction_1	59.2527542725981	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAACTCAAG	NA	False	NA	NA	False	NA	NA	NA	136059854	136077674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.45	chr4	+	5028	4	NNC	ENSMUSG00000066037.15	novel	2543	10	NA	NA	-3479	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	277.169422716303	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	False	NA	23	True	AATAAA	-17	NA	136059904	136067983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136061021_136061222_136063759_136066486_136066609_136066729
ES.24749.46	chr4	+	3190	1	FSM	ENSMUSG00000066037.15	ENSMUST00000182327.2	3948	1	3773	-3015	3773	3015	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTGGTGATTTGGG	NA	False	NA	NA	False	NA	NA	NA	136070102	136073292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136070100_136073300
ES.24749.47	chr4	+	1643	1	ISM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	37447	9390	-7359	7091	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAAATCAGAG	NA	False	NA	NA	False	NA	NA	NA	136075725	136077368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136075700_136077400
ES.24749.6	chr4	+	7527	9	NIC	ENSMUSG00000066037.15	novel	21452	11	NA	NA	0	-8	intron_retention	FALSE	canonical	3	130	junction_1	153.05472877373	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCACCTATTTCAAAT	NA	False	NA	24	True	AATAAA	-18	NA	136038278	136067984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.7	chr4	+	3366	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	27	-850	1	668	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCCTGTTTGGTGTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	136038279	136068842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.8	chr4	+	7362	8	NIC	ENSMUSG00000066037.15	novel	2543	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	289	junction_1	108.202191686279	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTATTTCAAATTCAAT	NA	False	NA	29	True	AATAAA	-23	NA	136038279	136067989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136059915_136063608_136063759_136066486_136066609_136066729
ES.24749.9	chr4	+	2525	10	NNC	ENSMUSG00000066037.15	novel	2647	10	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	221.644359779856	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACCTATTTCAAATTCA	NA	False	NA	27	True	AATAAA	-21	NA	136038279	136067987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059699_136059915_136063608_136063759_136066486_136066609_136066729
ES.2475.1	chr10	+	142	1	Intergenic	novelGene_1878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACTAAGAAAAGAAAAG	2112	False	NA	NA	False	NA	NA	NA	24191203	24191345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_24191200_24191300
ES.24750.1	chr4	-	178	1	Intergenic	novelGene_20401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	784	False	NA	NA	False	NA	NA	NA	136052595	136052417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136052400_136052600
ES.24751.1	chr4	-	6557	1	Antisense	novelGene_ENSMUSG00000066037.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAACAA	NA	False	NA	NA	False	AAGAAA	-4	NA	136059535	136052978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_136053000_136059500
ES.24752.1	chr4	-	4705	2	Antisense	novelGene_ENSMUSG00000066037.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACAAAAGTAGTCTTGA	NA	False	NA	NA	False	TTTAAA	-14	NA	136069149	136064323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_136066609_136066729
ES.24752.2	chr4	-	4809	1	Antisense	novelGene_ENSMUSG00000066037.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	136069149	136064340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_136064300_136069100
ES.24753.1	chr4	+	3353	2	NNC	ENSMUSG00000066037.15	novel	1919	2	NA	NA	-98	148874	intron_retention	FALSE	canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	990	False	NA	NA	False	NA	NA	NA	136082986	136235632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136086176_136235468
ES.24753.10	chr4	+	8897	4	Fusion	ENSMUSG00000066178.5_ENSMUSG00000001089.15	novel	3775	4	NA	NA	336	121	intron_retention	FALSE	canonical	0	0	junction_1	59.1063072400531	265	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAACTCTTTGCTCTATT	396	False	NA	NA	False	AATACA	-15	NA	136189896	136276751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_136190094_136248651_136248755_136266435_136270830_136272548
ES.24753.11	chr4	+	7622	5	NNC	ENSMUSG00000001089.15	novel	3775	4	NA	NA	-993	119	intron_retention	FALSE	canonical	0	0	junction_1	51.4805788623244	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTAACTCTTTGCTCTA	3164	False	NA	NA	False	AATACA	-13	NA	136196078	136276749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136196142_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.12	chr4	+	7459	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	-13	-8	-13	8	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGATGCCAATTTTGT	4144	False	NA	23	True	AATAAA	-29	NA	136197058	136276638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ES.24753.13	chr4	+	7531	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	1	-6	1	2	multi-exon	FALSE	canonical	3	55	junction_3	50.5488624995657	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTCAGTGATGCCAA	4158	False	NA	17	True	AATAAA	-23	NA	136197072	136276632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.14	chr4	+	7556	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	3	-121	3	121	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAACTCTTTGCTCTATT	4160	False	NA	NA	False	AATACA	-15	NA	136197074	136276751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ES.24753.16	chr4	+	9244	4	ISM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	3	-2	3	-1	intron_retention	FALSE	canonical	3	55	junction_3	52.8225541054408	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTTGAGTCAGTGATG	4160	False	NA	13	True	AATAAA	-19	NA	136197074	136276628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666
ES.24753.17	chr4	+	5170	5	NNC	ENSMUSG00000001089.15	novel	7526	5	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	61.328521097447	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCCTTTGAGTCAG	4160	False	NA	8	True	AATAAA	-14	NA	136197074	136276623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136268869_136272937
ES.24753.18	chr4	+	7648	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	3	-125	3	121	multi-exon	FALSE	canonical	3	55	junction_3	50.5488624995657	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAACTCTTTGCTCTATT	4160	False	NA	NA	False	AATACA	-15	NA	136197074	136276751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.19	chr4	+	4700	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	3	2735	3	190	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGGAGTTAAGAACTGT	4160	False	NA	NA	False	AATAAA	-30	NA	136197074	136273895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ES.24753.2	chr4	+	197	1	Intergenic	novelGene_20402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCACACTTGAGCTTATG	NA	False	NA	NA	False	NA	NA	NA	136098435	136098632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136098400_136098600
ES.24753.20	chr4	+	9148	3	ISM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	6	3	6	1	intron_retention	FALSE	canonical	3	86	junction_2	41.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTTTGAGTCAGTGAT	4163	False	NA	12	True	AATAAA	-18	NA	136197077	136276627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136197162_136248651_136248755_136267666
ES.24753.21	chr4	+	1396	2	FSM	ENSMUSG00000001089.15	ENSMUST00000142248.2	418	2	-36	-942	6	942	multi-exon	FALSE	canonical	3	169	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4163	False	NA	NA	False	NA	NA	NA	136197077	136249963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651
ES.24753.22	chr4	+	4097	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	9	3420	9	-499	multi-exon	FALSE	canonical	3	55	junction_3	50.5488624995657	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGCTTACATTCCTTTG	4166	False	NA	NA	False	NA	NA	NA	136197080	136273206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.23	chr4	+	7416	4	NIC	ENSMUSG00000001089.15	novel	7526	5	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_1	59.3314606446042	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTTGAGTCAGTGATG	4166	False	NA	13	True	AATAAA	-19	NA	136197080	136276628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_136197162_136266435_136266528_136267666_136270830_136272548
ES.24753.25	chr4	+	7574	6	NNC	ENSMUSG00000001089.15	novel	7526	5	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	52.7810572080552	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTTGAGTCAGTGA	4194	False	NA	11	True	AATAAA	-17	NA	136197108	136276626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_136197162_136242312_136242398_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.26	chr4	+	3966	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	42	3430	0	-505	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTAAGAGGCTTACATT	4199	False	NA	NA	False	NA	NA	NA	136197113	136273200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ES.24753.27	chr4	+	9870	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	51	-2483	9	2483	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTTCTTCCCTAAGC	4208	False	NA	NA	False	AATAAA	-23	NA	136197122	136279113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ES.24753.29	chr4	+	3244	2	Intergenic	novelGene_20412	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATGAAAGGACAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	136217769	136221216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136220246_136220448
ES.24753.3	chr4	+	177	1	Intergenic	novelGene_20403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	136112285	136112462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136112300_136112500
ES.24753.30	chr4	+	3133	1	Intergenic	novelGene_20414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	136226219	136229352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136226200_136229400
ES.24753.31	chr4	+	7344	3	ISM	ENSMUSG00000001089.15	ENSMUST00000063021.7	3775	4	-56	-2919	-56	-2	intron_retention	FALSE	canonical	3	86	junction_1	29	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	627	False	NA	9	True	AATAAA	-15	NA	136248649	136276624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136248755_136267666_136270830_136272548
ES.24753.32	chr4	+	7434	4	ISM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	51578	4	-56	-4	3prime_fragment	FALSE	canonical	3	55	junction_2	41.0446910899164	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATGCTCCTTTGAGTCA	627	False	NA	7	True	AATAAA	-13	NA	136248649	136276622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_136248755_136266435_136266528_136267666_136270830_136272548
ES.24753.33	chr4	+	5396	2	Intergenic	novelGene_20415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGAATCTAAATACCGT	3744	False	NA	NA	False	NA	NA	NA	136251766	136257244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136253884_136253965
ES.24753.34	chr4	+	6147	1	Genic_Genomic	ENSMUSG00000001089.15	novel	NA	NA	NA	NA	4189	820	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	5743	False	NA	NA	False	NA	NA	NA	136276764	136282911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_136276800_136282900
ES.24753.4	chr4	+	177	2	Intergenic	novelGene_20404	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAACCTAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	136112285	136133455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136112444_136133436
ES.24753.5	chr4	+	189	1	Intergenic	novelGene_20405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGGGGGATGGGG	NA	False	NA	NA	False	NA	NA	NA	136117736	136117925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136117700_136117900
ES.24753.6	chr4	+	174	1	Intergenic	novelGene_20406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	136130957	136131131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136131000_136131100
ES.24753.7	chr4	+	175	1	Intergenic	novelGene_20407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	136133121	136133296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136133100_136133300
ES.24753.8	chr4	+	144	1	Intergenic	novelGene_20408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAACCTAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	136133311	136133455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136133300_136133500
ES.24753.9	chr4	+	174	1	Intergenic	novelGene_20409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTC	3410	False	NA	NA	False	NA	NA	NA	136184563	136184737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136184600_136184700
ES.24754.1	chr4	+	797	1	Antisense	novelGene_ENSMUSG00000036940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAAAAAAAATAAATGAG	378	False	NA	NA	False	NA	NA	NA	136285090	136285887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_136285100_136285900
ES.24754.2	chr4	+	1858	1	Antisense	novelGene_ENSMUSG00000036940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATCTTAACTTCACAATC	378	False	NA	NA	False	NA	NA	NA	136285090	136286948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_136285100_136286900
ES.24755.1	chr4	+	3805	1	Intergenic	novelGene_20416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATATGAAGTTCTGACAC	4460	False	NA	NA	False	NA	NA	NA	136315482	136319287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136315500_136319300
ES.24756.1	chr4	+	181	1	Intergenic	novelGene_20417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCCTCTACAGT	NA	False	NA	NA	False	NA	NA	NA	136326143	136326324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136326100_136326300
ES.24757.1	chr4	-	177	1	Intergenic	novelGene_20410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACACTCATCCAC	NA	False	NA	NA	False	NA	NA	NA	136195361	136195184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136195200_136195400
ES.24758.1	chr4	-	156	1	Intergenic	novelGene_20411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136208676	136208520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136208500_136208700
ES.24759.1	chr4	-	370	1	Intergenic	novelGene_20413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	136220439	136220069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136220100_136220400
ES.2476.1	chr10	-	5043	1	Intergenic	novelGene_1879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	24207003	24201960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_24202000_24207000
ES.24760.1	chr4	-	3797	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-61	681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	403.717503602063	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGCTATAGTGGTGTG	NA	False	NA	NA	False	AATATA	-36	NA	136330095	136277169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297781_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.10	chr4	-	3071	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	396.376915674688	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136330051	136277854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286493_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.13	chr4	-	6192	18	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	10	-4	intron_retention	FALSE	canonical	1	1	junction_11	422.906478164329	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTATTTTTAATTGTG	NA	False	NA	-13	True	AATAAA	-22	NA	136330024	136277858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136293540_136295979_136297768_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.14	chr4	-	4366	16	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-1298	-4	intron_retention	FALSE	canonical	3	1388	junction_10	115.248986498315	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTATTTTTAATTGTG	NA	False	NA	-13	True	AATAAA	-22	NA	136305767	136277858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381
ES.24760.16	chr4	-	5557	17	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	6	-9	intron_retention	FALSE	canonical	3	991	junction_15	224.623156642409	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	136330028	136277863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.18	chr4	-	3865	18	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-11	-9	intron_retention	FALSE	canonical	3	907	junction_16	212.667715211843	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	136330045	136277863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.19	chr4	-	3054	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-17	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	388.003833833188	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	136330015	136277863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281730_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.2	chr4	-	3771	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-60	-683	-24	679	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCACTGCTATAGTGGTG	NA	False	NA	NA	False	AATATA	-34	NA	136330058	136277171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.20	chr4	-	3036	19	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-23	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	398.892513911105	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	136330057	136277863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281730_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.23	chr4	-	2776	21	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-21	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	393.708200955987	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	136330055	136277863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542_136329590_136329889
ES.24760.3	chr4	-	3161	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-124	-9	-88	5	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGTGTGTGTGTCT	NA	False	NA	0	True	AATAAA	-35	NA	136330122	136277845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.30	chr4	-	11325	16	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-10	-13	intron_retention	TRUE	non_canonical	0	0	junction_5	620.507090119758	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGAAAATTTATTT	NA	False	NA	-22	True	AATAAA	-13	NA	136330044	136277867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279900_136281106_136281222_136281523_136281712_136282483_136282714_136282944_136285883_136286483_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136304516_136309350_136309411_136320275_136320442_136322195_136322328_136329542
ES.24760.33	chr4	-	4676	17	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-23	-13	intron_retention	FALSE	canonical	1	55	junction_2	426.058016699311	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGAAAATTTATTT	NA	False	NA	-22	True	AATAAA	-13	NA	136330057	136277867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.34	chr4	-	4766	7	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	39	-15	intron_retention	FALSE	canonical	3	1426	junction_5	131.805938999559	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATATGAAAATTTAT	NA	False	NA	-24	True	AATAAA	-11	NA	136288773	136277869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328
ES.24760.36	chr4	-	2956	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-18	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	402.767407429567	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTTATATGAAAATTT	NA	False	NA	-26	True	AATAAA	-9	NA	136330016	136277871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279257_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.37	chr4	-	4055	19	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	4	-20	intron_retention	FALSE	canonical	3	991	junction_17	213.199473339168	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330030	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.39	chr4	-	5676	18	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	17	-20	intron_retention	FALSE	canonical	3	991	junction_16	218.725990279	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330017	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.4	chr4	-	3074	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	-66	0	-66	0	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-30	NA	136330100	136277850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.40	chr4	-	2994	19	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	1	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	414.397584482211	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330033	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295990_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.41	chr4	-	3009	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	9	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	515.164600003681	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330025	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301342_136301415_136304400_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.42	chr4	-	1823	12	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-61	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	492.402694167224	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136295979	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279780_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883
ES.24760.44	chr4	-	2839	18	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	17	-20	combination_of_known_splicesites	FALSE	canonical	1	55	junction_2	413.562704709508	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330017	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.45	chr4	-	3042	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-8	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	403.887748043179	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330042	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297841_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.46	chr4	-	3013	19	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-23	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	414.438073379687	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330057	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299522_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.47	chr4	-	2936	19	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-7	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	413.085876493042	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330041	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.48	chr4	-	4183	3	NNC	ENSMUSG00000036940.16	novel	828	2	NA	NA	-491	-20	intron_retention	FALSE	non_canonical	0	0	junction_2	870.5	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136283126	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136282714_136282944
ES.24760.49	chr4	-	3012	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-17	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	403.923685230644	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330015	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300396_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.5	chr4	-	3067	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	396.376915674688	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAATTGTGTGTGTGT	NA	False	NA	-6	True	AATAAA	-29	NA	136330043	136277851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285874_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.50	chr4	-	2980	19	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	11	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	390.709077618288	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330023	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320268_136320442_136329542
ES.24760.51	chr4	-	3011	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	8	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	403.717503602063	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330026	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295954_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.52	chr4	-	2912	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-9	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	403.484099169408	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330043	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542_136329725_136329805
ES.24760.53	chr4	-	3162	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-46	-20	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_19	487.64173307234	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330080	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136322195_136322328_136329542
ES.24760.54	chr4	-	3012	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	11	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	388.049808323123	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330023	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320296_136320442_136329542
ES.24760.55	chr4	-	3835	6	NNC	ENSMUSG00000036940.16	novel	2051	17	NA	NA	-2094	-20	intron_retention	FALSE	non_canonical	0	0	junction_5	652.871932311384	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136284729	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136282714_136282944
ES.24760.56	chr4	-	7798	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-18	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	397.609219476539	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330016	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136307603_136307665_136309411_136320275_136320442_136329542
ES.24760.57	chr4	-	2801	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-17	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	403.484099169408	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330015	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542_136329659_136329822
ES.24760.58	chr4	-	4045	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-10	-20	intron_retention	FALSE	canonical	2	62	junction_19	481.822509590329	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330044	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136322195_136322328_136329542
ES.24760.59	chr4	-	2914	19	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	27	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	414.472757448142	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136329971	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282602_136284944_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.6	chr4	-	4870	19	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	991	junction_17	215.072461231667	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATTGTGTGTGTG	NA	False	NA	-7	True	AATAAA	-28	NA	136330048	136277852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.60	chr4	-	3095	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-10	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	521.408809682388	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330044	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136293540_136293642_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ES.24760.61	chr4	-	3106	14	NNC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-3687	-20	intron_retention	FALSE	canonical	1	1	junction_10	603.94644928956	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136299605	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136287725_136288328_136288472_136293540_136293642_136295883_136295979_136297768_136297851_136299528
ES.24760.64	chr4	-	3046	20	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-9	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	388.049808323123	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTTTATATGAAAA	NA	False	NA	-29	True	AATAAA	-6	NA	136330043	136277874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320282_136320442_136329542
ES.24760.65	chr4	-	7265	11	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	-42	-813	intron_retention	FALSE	canonical	3	907	junction_9	233.112955452931	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGCTTCCTGATCA	NA	False	NA	NA	False	AATAAA	-11	NA	136330076	136283358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136304516_136320275_136320442_136329542
ES.24760.66	chr4	-	1719	13	ISM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	85	7865	85	123	5prime_fragment	FALSE	canonical	3	991	junction_11	213.392228198582	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAGCGTATTGAATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	136329913	136285719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ES.24760.67	chr4	-	555	2	ISM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	-8	42496	-8	-34508	5prime_fragment	FALSE	canonical	3	1672	junction_1	0	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTTCCCCCACCA	NA	False	NA	1	True	AAGAAA	-22	NA	136330006	136320350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_136320442_136329542
ES.24760.68	chr4	-	175	1	Intergenic	novelGene_20418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTCATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	136327238	136327063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136327100_136327200
ES.24760.69	chr4	-	821	1	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	9	-43362	mono-exon	FALSE	NA	NA	NA	NA	NA	1411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAATATACAAA	NA	False	NA	NA	False	NA	NA	NA	136330025	136329204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136329200_136330000
ES.24760.7	chr4	-	3206	21	NNC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_20	474.190214998159	1518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136330044	136277854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136322195_136322328_136329542
ES.24760.8	chr4	-	9101	14	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-9	0	intron_retention	FALSE	canonical	1	55	junction_2	468.3966356455	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136330007	136277854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136304516_136320275_136320442_136329542
ES.24760.9	chr4	-	6046	19	NIC	ENSMUSG00000036940.16	novel	3028	20	NA	NA	-15	0	intron_retention	FALSE	canonical	3	991	junction_17	215.120846026278	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136330049	136277854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136304516_136309350_136309411_136320275_136320442_136329542
ES.24761.1	chr4	+	178	1	Intergenic	novelGene_20419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTCAGTTAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	136331051	136331229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136331100_136331200
ES.24762.1	chr4	-	178	1	Antisense	novelGene_ENSMUSG00000103119.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATATTT	NA	False	NA	NA	False	NA	NA	NA	136368922	136368744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_136368700_136368900
ES.24763.1	chr4	-	10927	16	NNC	ENSMUSG00000028664.15	novel	3653	16	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.82423307722061	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGACTCAATATTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	136563289	136374844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386423_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399822_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.10	chr4	-	4109	16	NNC	ENSMUSG00000028664.15	novel	10902	16	NA	NA	-24	269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.09004875689194	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTACCTTTTGAGGACTT	NA	False	NA	-4	True	AATGAA	-16	NA	136563323	136381687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136382763_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.11	chr4	-	4072	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-20	6850	-20	257	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGACATTTCCTACC	NA	False	NA	-16	True	AATGAA	-4	NA	136563319	136381699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.12	chr4	-	1787	5	NNC	ENSMUSG00000028664.15	novel	2519	3	NA	NA	0	42742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5217186218029	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTAGGTTTTGTTTGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	136563299	136453960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136454646_136454718_136454852_136498266_136498952_136501890_136501956_136563080
ES.24763.13	chr4	-	155	1	Intergenic	novelGene_20420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	136487488	136487333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136487300_136487500
ES.24763.14	chr4	-	257	1	Intergenic	novelGene_20421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGGACCCGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	136512675	136512418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136512400_136512700
ES.24763.2	chr4	-	4877	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-41	6066	-41	3	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTACTCTGTAAGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	136563340	136380915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.3	chr4	-	4736	16	NNC	ENSMUSG00000028664.15	novel	10902	16	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	6.92627846201215	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACCCCTGTACTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	136563299	136380922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402749_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.5	chr4	-	4184	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105845.9	10902	16	-26	6744	-26	363	multi-exon	FALSE	canonical	3	19	junction_7	4.97728172131469	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTGGATTTTTTTATA	NA	False	NA	-1	True	AATACA	-24	NA	136563325	136381593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24763.6	chr4	-	3485	14	NNC	ENSMUSG00000028664.15	novel	10902	16	NA	NA	-52495	363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.79348871534969	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTGGATTTTTTTATA	NA	False	NA	-1	True	AATACA	-24	NA	136473846	136381593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136473550
ES.24763.7	chr4	-	4057	16	NNC	ENSMUSG00000028664.15	novel	10902	16	NA	NA	7	362	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	6.92627846201215	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGGATTTTTTTAT	NA	False	NA	-2	True	AATACA	-23	NA	136563292	136381594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402749_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ES.24764.1	chr4	+	175	1	Intergenic	novelGene_20422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	136587588	136587763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136587600_136587800
ES.24765.1	chr4	-	176	1	Intergenic	novelGene_20423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAATACAGAGAG	2796	False	NA	NA	False	NA	NA	NA	136599991	136599815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136599800_136600000
ES.24766.1	chr4	-	171	1	Intergenic	novelGene_20424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAAAAAAAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	136646018	136645847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136645800_136646000
ES.24767.1	chr4	-	5554	1	Intergenic	novelGene_20425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTTTATGCTTGGGT	NA	False	NA	NA	False	AATACA	-18	NA	136706013	136700459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136700500_136706000
ES.24768.11	chr4	-	7171	20	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	7.70509059340846	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGCTTGTGTGTTT	9678	False	NA	-1	True	AATAAA	-17	NA	136776112	136707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136745666_136745790_136746083_136775956
ES.24768.12	chr4	-	7222	20	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.60376055088766	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGGCTTGTGTGTTT	9651	False	NA	-1	True	AATAAA	-17	NA	136776139	136707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136709496_136709595_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716077_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.13	chr4	-	7751	3	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	2394	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	13	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGTGGCTTGTGTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	136716579	136707046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136715527_136715739
ES.24768.17	chr4	-	7313	6	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	648	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5565145763173	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAACTGTGGCTTGTGT	NA	False	NA	-5	True	AATAAA	-13	NA	136718325	136707049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136709489_136709588_136710556_136712124_136712352_136713793_136713881_136714519_136715527_136715739
ES.24768.18	chr4	-	3943	10	NIC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	-11381	-3355	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	4.79454422453143	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGGGCTGAGGGGG	7818	False	NA	NA	False	NA	NA	NA	136730354	136715530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511
ES.24768.19	chr4	-	3691	13	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	29978	10959	-27055	-5826	internal_fragment	FALSE	canonical	3	15	junction_1	4.65698400254929	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTGTTGGAAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	136746028	136718001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334
ES.24768.2	chr4	-	7322	19	NIC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_6	4.22697101369495	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTGTTTCAG	9651	False	NA	2	True	AATAAA	-20	NA	136776139	136707042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.20	chr4	-	3935	5	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	-104	24709	2	10037	5prime_fragment	FALSE	canonical	3	17	junction_3	2.06155281280883	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTATTGGGCTGGAGA	9680	False	NA	NA	False	NA	NA	NA	136776110	136731751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.22	chr4	-	3832	5	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	-105	24813	1	9933	5prime_fragment	FALSE	canonical	3	17	junction_3	2.06155281280883	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	9679	False	NA	NA	False	NA	NA	NA	136776111	136731855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.3	chr4	-	7983	18	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	15	0	intron_retention	TRUE	non_canonical	0	0	junction_17	6.55506354900453	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTGTTTCAG	9693	False	NA	2	True	AATAAA	-20	NA	136776097	136707042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746083_136775956
ES.24768.5	chr4	-	10337	17	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_16	6.65676347784717	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTGTTTCAG	9651	False	NA	2	True	AATAAA	-20	NA	136776139	136707042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746083_136775956
ES.24768.6	chr4	-	7400	20	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.73164881198057	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGCTTGTGTGTTTC	9697	False	NA	0	True	AATAAA	-18	NA	136776093	136707044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136727112_136727239_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.7	chr4	-	7199	20	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.68149877916432	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGCTTGTGTGTTTC	9679	False	NA	0	True	AATAAA	-18	NA	136776111	136707044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136709490_136709589_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716077_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746083_136775956
ES.24768.8	chr4	-	7222	19	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_5	5.95352369983058	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGCTTGTGTGTTTC	9693	False	NA	0	True	AATAAA	-18	NA	136776097	136707044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716018_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ES.24768.9	chr4	-	6133	12	NNC	ENSMUSG00000060862.11	novel	7192	19	NA	NA	-6995	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.8330684434663	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGCTTGTGTGTTTC	NA	False	NA	0	True	AATAAA	-18	NA	136725968	136707044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716074_136718808_136718974_136721366_136721455_136721655_136721863_136722017_136723024_136723335_136723505_136725131_136725266_136725807
ES.24769.1	chr4	-	216	1	Intergenic	novelGene_20426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTCACCCTGTCTGTG	NA	False	NA	NA	False	CATAAA	-15	NA	136791134	136790918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136790900_136791100
ES.2477.1	chr10	+	2388	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	12	-2	12	2	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTGGCTGTTCATTC	NA	False	NA	7	True	AATAAA	-23	NA	24471351	24474578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
ES.2477.2	chr10	+	2841	3	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	60	1	60	-1	intron_retention	FALSE	canonical	3	27	junction_1	5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAGGCTTGGCTGTTCA	NA	False	NA	4	True	AATAAA	-20	NA	24471399	24474575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_24471687_24471773_24471997_24472244
ES.2477.4	chr10	+	2706	4	FSM	ENSMUSG00000019997.12	ENSMUST00000176228.2	2490	4	-222	6	62	-1	multi-exon	FALSE	canonical	3	27	junction_1	4.32049379893857	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAGGCTTGGCTGTTCA	NA	False	NA	4	True	AATAAA	-20	NA	24471401	24474575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629
ES.2477.5	chr10	+	2054	4	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	433	-2	95	2	3prime_fragment	FALSE	canonical	3	24	junction_3	5.35412613473634	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTGGCTGTTCATTC	NA	False	NA	7	True	AATAAA	-23	NA	24471772	24474578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_24471997_24472244_24472497_24472629_24472842_24473212
ES.24770.1	chr4	-	217	1	Intergenic	novelGene_20427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGAAGTGTGATGTA	8799	False	NA	NA	False	AATACA	-6	NA	136810876	136810659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_136810700_136810900
ES.24771.1	chr4	+	2172	5	Intergenic	novelGene_20428	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTTTGGGCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	136814843	136821299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_136816091_136817576_136817650_136819021_136819125_136820149_136820320_136820720
ES.24772.1	chr4	+	1797	1	Intergenic	novelGene_20429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCCCTTTTAATGG	NA	False	NA	NA	False	NA	NA	NA	137081847	137083644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137081800_137083600
ES.24773.10	chr4	-	1626	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	-33	515	-33	-515	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTTTCTTACATGCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	137085064	137047521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.13	chr4	-	958	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	-5	1155	-5	911	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAAAATCC	NA	False	NA	10	True	NA	NA	NA	137085036	137048161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.16	chr4	-	795	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	5	1308	5	758	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGACAAACGCCCTGC	NA	False	NA	-15	True	NA	NA	NA	137085026	137048314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.17	chr4	-	2443	5	ISM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	19851	1330	19830	736	3prime_fragment	FALSE	canonical	3	1798	junction_1	43.0203440246588	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAAATTTGTTTCT	NA	False	NA	-37	True	NA	NA	NA	137065180	137048336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285
ES.24773.19	chr4	-	1864	1	NIC	ENSMUSG00000006699.18	novel	1448	6	NA	NA	34071	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGGTGAAGCTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	137050939	137049075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137049100_137050900
ES.24773.2	chr4	-	2150	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	-43	1	-43	-1	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAAGGTTATTTTCCT	NA	False	NA	-2	True	ATTAAA	-23	NA	137085074	137047007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.20	chr4	-	1457	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	-14	5	7	-5	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACGCCTGGTGAAGCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	137085024	137049077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.21	chr4	-	789	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	-18	677	3	-677	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTGCGTCTTCTTA	NA	False	NA	-23	True	AATAAA	-14	NA	137085028	137049749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.4	chr4	-	1988	7	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	682.342146987533	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCCTGAAGGTTATT	NA	False	NA	-7	True	ATTAAA	-18	NA	137085021	137047012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137048162_137048265_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ES.24773.5	chr4	-	2015	5	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	21568	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	921.525365901558	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCCTGAAGGTTATT	NA	False	NA	-7	True	ATTAAA	-18	NA	137063442	137047012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137048504_137056023_137056214_137056325_137056430_137059717_137059791_137063285
ES.24773.7	chr4	-	4682	1	NIC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	33314	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	738	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAGCCTGAAGGTTA	NA	False	NA	-9	True	ATTAAA	-16	NA	137051696	137047014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137047000_137051700
ES.24773.9	chr4	-	2063	6	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	724.061765321164	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTGAGCCTGAAGGT	NA	False	NA	-11	True	ATTAAA	-14	NA	137085005	137047016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063294_137063441_137084956
ES.24774.1	chr4	+	219	1	Intergenic	novelGene_20430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCAGCCCTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	137090671	137090890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137090700_137090900
ES.24774.3	chr4	+	205	2	Intergenic	novelGene_20431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	52	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAACTTC	NA	False	NA	NA	False	NA	NA	NA	137090672	137091048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137090850_137091020
ES.24775.1	chr4	+	160	1	Intergenic	novelGene_20432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTAAGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	137100188	137100348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137100200_137100300
ES.24776.1	chr4	+	93	1	Intergenic	novelGene_20433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTCT	NA	False	NA	NA	False	NA	NA	NA	137108908	137109001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137108900_137109000
ES.24777.1	chr4	-	182	1	Intergenic	novelGene_20434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	137119738	137119556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137119600_137119700
ES.24778.1	chr4	-	171	1	Intergenic	novelGene_20435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGCCTTCCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	137123391	137123220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137123200_137123400
ES.24779.1	chr4	+	181	1	Intergenic	novelGene_20436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	137125912	137126093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137125900_137126100
ES.2478.1	chr10	+	2118	1	Intergenic	novelGene_1880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	24565338	24567456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_24565300_24567500
ES.24780.1	chr4	+	176	1	Intergenic	novelGene_20437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACTTAGC	NA	False	NA	NA	False	NA	NA	NA	137174412	137174588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137174400_137174600
ES.24781.1	chr4	+	177	1	Intergenic	novelGene_20438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACATCTGGA	NA	False	NA	NA	False	NA	NA	NA	137190085	137190262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137190100_137190300
ES.24782.1	chr4	+	2403	14	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-5	-15428	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	9.74952585707991	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAATAAATCATA	NA	False	NA	NA	False	NA	NA	NA	137196074	137240780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240287_137240328
ES.24782.11	chr4	+	14244	98	NIC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	16.2093790300788	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137196122	137297939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137253648_137253733_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.12	chr4	+	6828	1	Intergenic	novelGene_20439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTTGCTTGCCGTACT	NA	False	NA	NA	False	NA	NA	NA	137200455	137207283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137200500_137207300
ES.24782.13	chr4	+	13110	89	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-11186	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_65	16.1651471837121	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137238583	137297939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280659_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286229_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295688_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.14	chr4	+	11919	81	NIC	ENSMUSG00000028763.19	novel	14176	97	NA	NA	-6602	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_11	16.5539836595304	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTCCTGTTTCAATG	NA	False	NA	28	True	AATAAA	-17	NA	137243167	137297940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.15	chr4	+	203	1	Intergenic	novelGene_20441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	137255509	137255712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137255500_137255700
ES.24782.17	chr4	+	8729	38	NIC	ENSMUSG00000028763.19	novel	14176	97	NA	NA	21060	0	intron_retention	FALSE	canonical	3	24	junction_6	13.7743475914647	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTCCTGTTTCAATG	NA	False	NA	28	True	AATAAA	-17	NA	137270829	137297940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072
ES.24782.18	chr4	+	5021	35	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	79311	874	-21091	-361	3prime_fragment	FALSE	canonical	3	28	junction_9	13.7493629924794	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGGCAAGGCCACGCT	NA	False	NA	NA	False	NA	NA	NA	137275390	137297067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.19	chr4	+	5407	35	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-20743	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	15.8418055400313	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTCCTGTTTCAATGA	NA	False	NA	29	True	AATAAA	-18	NA	137275738	137297941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802_137297071_137297383
ES.24782.2	chr4	+	1861	13	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	3	57737	3	-16004	5prime_fragment	FALSE	canonical	3	21	junction_4	6.15708715402196	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGATCTCTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	137196082	137240204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940
ES.24782.20	chr4	+	5147	30	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-18296	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8498668215836	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATGTCTCCTGTTTCA	597	False	NA	25	True	AATAAA	-14	NA	137278185	137297937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137278258_137278381_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280677_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.21	chr4	+	4633	27	NNC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	-16326	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	19.3455038887608	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGATGTCTCCTGTTTCA	2567	False	NA	25	True	AATAAA	-14	NA	137280155	137297937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137294359_137294446_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.22	chr4	+	4624	25	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	84094	1	-16274	-1	intron_retention	FALSE	canonical	3	30	junction_1	13.7648909266373	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	2619	False	NA	27	True	AATAAA	-16	NA	137280207	137297939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571
ES.24782.25	chr4	+	3305	19	NNC	ENSMUSG00000028763.19	novel	14176	97	NA	NA	-10083	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.8311698237651	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTCCTGTTTCAATG	8810	False	NA	28	True	AATAAA	-17	NA	137286398	137297940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295695_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.26	chr4	+	2686	14	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	93357	2	-7011	-2	3prime_fragment	FALSE	canonical	3	34	junction_2	13.248199609736	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTCTCCTGTTTCAA	NA	False	NA	26	True	AATAAA	-15	NA	137289470	137297938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.27	chr4	+	2578	13	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	93576	1	-6792	-1	3prime_fragment	FALSE	canonical	3	34	junction_1	13.3757138957972	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137289689	137297939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.3	chr4	+	1410	10	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	3	58547	3	-16814	5prime_fragment	FALSE	canonical	3	21	junction_4	6.76227735764575	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCGTCCCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	137196082	137239394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152
ES.24782.4	chr4	+	14201	97	NIC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	2	11	junction_14	15.6605394434458	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTCCTGTTTCAATGA	NA	False	NA	29	True	AATAAA	-18	NA	137196083	137297941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.5	chr4	+	2555	18	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	4	53732	4	-11999	5prime_fragment	FALSE	canonical	2	11	junction_14	7.47915210855989	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGTCAGAGCTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	137196083	137244209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086
ES.24782.6	chr4	+	9371	62	ISM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	-20	22802	14	18930	5prime_fragment	FALSE	canonical	2	11	junction_14	7.26575427366479	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAATATGGAATTGGG	NA	False	NA	NA	False	AATAAA	-31	NA	137196093	137275138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865
ES.24782.7	chr4	+	14442	96	NIC	ENSMUSG00000028763.19	novel	14187	97	NA	NA	16	-1	intron_retention	FALSE	canonical	2	11	junction_14	15.5061385396227	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCCTGTTTCAAT	NA	False	NA	27	True	AATAAA	-16	NA	137196095	137297939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ES.24782.8	chr4	+	2424	13	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	16	57161	16	-15428	5prime_fragment	FALSE	canonical	3	21	junction_4	6.15708715402196	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAATAAATCATA	NA	False	NA	NA	False	NA	NA	NA	137196095	137240780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940
ES.24783.1	chr4	-	9140	68	Antisense	novelGene_ENSMUSG00000099134.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCTCGCCTCTTTCCC	940	False	NA	NA	False	NA	NA	NA	137278258	137196101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_137196235_137228368_137228504_137229584_137229631_137235110_137235220_137235318_137235380_137235614_137235774_137237850_137237982_137238215_137238471_137238554_137238677_137239152_137239285_137239413_137239556_137239646_137239805_137239942_137240087_137241920_137242084_137242602_137242783_137242866_137243064_137243168_137243316_137244082_137244213_137244509_137244597_137244673_137244735_137244893_137244959_137245691_137245831_137245939_137246119_137246224_137246405_137246494_137246612_137246972_137247095_137247195_137247303_137247393_137247526_137247820_137247906_137248751_137248804_137249049_137249143_137249341_137249482_137249766_137249960_137256113_137256208_137256472_137256553_137256651_137256882_137258931_137259048_137260741_137260871_137260975_137261063_137262435_137262494_137262651_137262815_137262925_137263039_137265493_137265597_137265681_137265862_137266411_137266536_137266608_137266764_137266846_137266989_137267274_137267416_137267503_137267655_137267963_137268117_137268703_137268862_137268948_137269085_137269539_137269691_137269819_137269959_137270048_137270198_137270830_137270962_137271148_137271309_137271679_137271815_137271898_137272048_137272585_137272724_137272828_137272985_137273866_137274002_137275326_137275481_137275653_137275799_137276837_137276988_137277289_137277429_137277648_137277808_137278117
ES.24783.2	chr4	-	2558	3	Antisense	novelGene_ENSMUSG00000028763.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGCAGTGGTGGCGC	NA	False	NA	NA	False	AATGAA	-38	NA	137237255	137234532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_137235220_137235318_137236555_137236620
ES.24783.3	chr4	-	785	1	Antisense	novelGene_ENSMUSG00000028763.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-12	NA	137235343	137234558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_137234600_137235300
ES.24783.4	chr4	-	174	1	Intergenic	novelGene_20440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAGA	6733	False	NA	NA	False	NA	NA	NA	137242384	137242210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137242200_137242400
ES.24784.1	chr4	+	145	1	Intergenic	novelGene_20442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACATCTGGC	4226	False	NA	NA	False	NA	NA	NA	137301121	137301266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137301100_137301300
ES.24785.1	chr4	-	370	1	Intergenic	novelGene_20443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAGAAAG	8521	False	NA	NA	False	NA	NA	NA	137317034	137316664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137316700_137317000
ES.24786.1	chr4	+	303	1	Intergenic	novelGene_20444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	137319504	137319807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137319500_137319800
ES.24787.1	chr4	+	5700	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_1	399.829040969692	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	98	False	NA	22	True	ATTAAA	-32	NA	137321045	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321163_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343823_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.10	chr4	+	3500	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	12	10	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	323.532283622444	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	130	False	NA	18	True	AATAAA	-30	NA	137321077	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.101	chr4	+	5701	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	7	junction_11	439.246858234792	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	555	False	NA	22	True	ATTAAA	-32	NA	137321502	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.102	chr4	+	3500	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	371.279900873855	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAAGGACGTGTTTC	555	False	NA	11	True	AATAAA	-23	NA	137321502	137383645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341189_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.104	chr4	+	5746	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-14	0	intron_retention	FALSE	canonical	3	7	junction_11	452.409123809547	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	556	False	NA	17	True	ATTAAA	-27	NA	137321503	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.106	chr4	+	5152	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-14	-1	intron_retention	FALSE	canonical	2	4	junction_1	358.631481128189	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	556	False	NA	15	True	ATTAAA	-25	NA	137321503	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.107	chr4	+	4364	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-14	12	intron_retention	FALSE	canonical	1	7	junction_21	335.453883108107	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	556	False	NA	20	True	AATAAA	-32	NA	137321503	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366475_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.109	chr4	+	3646	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-14	10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	447.565871334794	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	556	False	NA	18	True	AATAAA	-30	NA	137321503	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137363987_137364122_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.11	chr4	+	5693	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_6	438.281044933981	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGGAGTGAGTTCTTTG	147	False	NA	21	True	ATTAAA	-31	NA	137321094	137385846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321192_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335492_137336288_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.110	chr4	+	5319	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	-470	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_11	408.010891711364	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATGAATCTCCAGGCTT	557	False	NA	-8	True	ATTAAA	-4	NA	137321504	137385371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.111	chr4	+	8102	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	10	intron_retention	FALSE	canonical	3	555	junction_18	269.566856161562	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	557	False	NA	18	True	AATAAA	-30	NA	137321504	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.112	chr4	+	5770	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	3	junction_18	402.09589790386	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	557	False	NA	14	True	ATTAAA	-24	NA	137321504	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137361465_137361558_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.113	chr4	+	3510	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	9	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	350.759743706732	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACGTGTTTCAGATTT	557	False	NA	17	True	AATAAA	-29	NA	137321504	137383651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.115	chr4	+	3043	11	ISM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	-11	7378	-11	-5457	5prime_fragment	FALSE	canonical	3	659	junction_9	186.595846684753	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATATGTAAGTACAC	559	False	NA	NA	False	NA	NA	NA	137321506	137345224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668
ES.24787.116	chr4	+	5868	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	5	junction_20	393.351019109769	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	559	False	NA	15	True	ATTAAA	-25	NA	137321506	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137363987_137364122_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.118	chr4	+	5671	26	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_25	326.465444419467	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	559	False	NA	17	True	ATTAAA	-27	NA	137321506	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380328_137383426
ES.24787.119	chr4	+	3424	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	429.591487524888	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGACTTGAAGGACG	559	False	NA	5	True	AATAAA	-17	NA	137321506	137383639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361209_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.12	chr4	+	6166	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	29	0	intron_retention	FALSE	canonical	2	3	junction_9	383.008010102229	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	147	False	NA	16	True	ATTAAA	-26	NA	137321094	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341189_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.120	chr4	+	5451	25	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-11	0	intron_retention	FALSE	canonical	1	17	junction_4	392.257001920368	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	559	False	NA	17	True	ATTAAA	-27	NA	137321506	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.121	chr4	+	5560	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-11	0	intron_retention	FALSE	canonical	3	45	junction_1	331.616226382244	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	559	False	NA	16	True	ATTAAA	-26	NA	137321506	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.124	chr4	+	5721	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-9	0	intron_retention	FALSE	canonical	3	67	junction_22	345.931881937781	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	561	False	NA	16	True	ATTAAA	-26	NA	137321508	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.125	chr4	+	4568	18	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-9	-4	intron_retention	FALSE	canonical	0	0	junction_9	450.090702123926	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTTTATCCGGAGTG	561	False	NA	12	True	ATTAAA	-22	NA	137321508	137385837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.127	chr4	+	10220	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_24	456.09957946581	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGGAGTGAGTTCTTTG	562	False	NA	21	True	ATTAAA	-31	NA	137321509	137385846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362212_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380340_137383432
ES.24787.128	chr4	+	3500	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	399.609562534652	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACGTGTTTCAGATTT	562	False	NA	17	True	AATAAA	-29	NA	137321509	137383651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.129	chr4	+	5726	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_26	348.28802990506	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	562	False	NA	15	True	ATTAAA	-25	NA	137321509	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380340_137383432
ES.24787.131	chr4	+	5655	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	8	junction_11	386.297561748735	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	562	False	NA	15	True	ATTAAA	-25	NA	137321509	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343802_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.132	chr4	+	4822	20	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-8	0	intron_retention	TRUE	canonical	0	0	junction_1	446.473432933909	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	562	False	NA	17	True	ATTAAA	-27	NA	137321509	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.133	chr4	+	5269	23	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	2	junction_18	409.281036626605	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	562	False	NA	15	True	ATTAAA	-25	NA	137321509	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.135	chr4	+	3532	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	392.951163459157	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGACCTTTATCCGGAGT	563	False	NA	11	True	ATTAAA	-21	NA	137321510	137385836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371747_137377603_137377730_137380268_137380318_137382533_137382561_137385506
ES.24787.137	chr4	+	4550	11	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-4	39101	-4	-3940	5prime_fragment	FALSE	canonical	3	584	junction_9	208.215657432384	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGGATTTTGTATCAG	566	False	NA	NA	False	ATTAAA	-17	NA	137321513	137346741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668
ES.24787.139	chr4	+	3990	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-4	12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	492.857256728765	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	566	False	NA	20	True	AATAAA	-32	NA	137321513	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361558_137362208_137362320_137363987_137364122_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.14	chr4	+	3388	25	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-75	12	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	347.316578290694	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	428	False	NA	20	True	AATAAA	-32	NA	137321375	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.142	chr4	+	10278	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	555	junction_18	269.566856161562	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	570	False	NA	16	True	ATTAAA	-26	NA	137321517	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.143	chr4	+	2897	17	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	0	24553	0	355	intron_retention	FALSE	canonical	3	584	junction_9	184.509781244789	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTCTTGGTTATTTTAC	570	False	NA	NA	False	AATGAA	-14	NA	137321517	137361289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653
ES.24787.144	chr4	+	9187	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_20	400.289648216308	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	570	False	NA	17	True	ATTAAA	-27	NA	137321517	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.145	chr4	+	3469	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	384.607715308152	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	570	False	NA	20	True	AATAAA	-32	NA	137321517	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137334013_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.148	chr4	+	3947	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	4	-4803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	400.518301357406	1738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATAATATCTGTCCTCTG	574	False	NA	NA	False	AATAAA	-7	NA	137321521	137375348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137374510
ES.24787.15	chr4	+	3668	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-64	12	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	439	False	NA	20	True	AATAAA	-32	NA	137321386	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.151	chr4	+	3476	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	332.948849510751	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAAGGACGTGTTTCA	574	False	NA	12	True	AATAAA	-24	NA	137321521	137383646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352462_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.153	chr4	+	5536	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_9	317.882806077963	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	575	False	NA	16	True	ATTAAA	-26	NA	137321522	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.155	chr4	+	3322	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	5	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	328.609910988698	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	575	False	NA	20	True	AATAAA	-32	NA	137321522	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.157	chr4	+	3454	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	8	9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	360.425258360045	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACGTGTTTCAGATTT	578	False	NA	17	True	AATAAA	-29	NA	137321525	137383651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.158	chr4	+	5846	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	9	0	intron_retention	FALSE	canonical	3	10	junction_26	346.576927289588	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	579	False	NA	17	True	ATTAAA	-27	NA	137321526	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.159	chr4	+	5588	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	-2	intron_retention	FALSE	canonical	1	8	junction_17	396.010496830576	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	580	False	NA	14	True	ATTAAA	-24	NA	137321527	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.160	chr4	+	3129	26	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	343.740367137757	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGACGTGTTTCAG	580	False	NA	13	True	AATAAA	-25	NA	137321527	137383647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331865_137334086_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.162	chr4	+	3560	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_11	451.344177237871	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	580	False	NA	9	True	AATAAA	-21	NA	137321527	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.163	chr4	+	7825	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	13	intron_retention	FALSE	non_canonical	1	3	junction_11	403.290634749702	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGTTTCAGATTTTCTA	580	False	NA	21	True	AATAAA	-33	NA	137321527	137383655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.165	chr4	+	3462	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	10	10	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_21	318.140392235248	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	580	False	NA	18	True	AATAAA	-30	NA	137321527	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.166	chr4	+	8005	26	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	10	intron_retention	FALSE	non_canonical	0	0	junction_18	325.400145052211	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	580	False	NA	18	True	AATAAA	-30	NA	137321527	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362303_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.167	chr4	+	5320	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	352.438580189687	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGACCTTTATCCGGAGT	580	False	NA	11	True	ATTAAA	-21	NA	137321527	137385836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137384987_137385372
ES.24787.169	chr4	+	6491	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	-2	intron_retention	FALSE	canonical	3	555	junction_19	237.055972343387	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGGAGTGAGTTCTTTG	580	False	NA	21	True	ATTAAA	-31	NA	137321527	137385846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.170	chr4	+	3318	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	30726	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	428.951853134699	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATGACTCTTGGAGTT	580	False	NA	NA	False	NA	NA	NA	137321527	137416574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137383648_137416539
ES.24787.172	chr4	+	7954	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	12	intron_retention	FALSE	non_canonical	1	3	junction_11	452.723367176832	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	580	False	NA	20	True	AATAAA	-32	NA	137321527	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.173	chr4	+	6061	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	0	intron_retention	FALSE	canonical	2	3	junction_9	411.213863720542	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	580	False	NA	17	True	ATTAAA	-27	NA	137321527	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341189_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.175	chr4	+	3647	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_27	457.38274955647	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGACGTGTTTCAG	581	False	NA	13	True	AATAAA	-25	NA	137321528	137383647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380434_137382533_137382561_137383432
ES.24787.176	chr4	+	9964	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-10	0	intron_retention	FALSE	non_canonical	1	3	junction_11	379.617730489206	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	581	False	NA	16	True	ATTAAA	-26	NA	137321528	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.179	chr4	+	3759	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	12	intron_retention	FALSE	canonical	2	5	junction_19	441.860966656476	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	581	False	NA	20	True	AATAAA	-32	NA	137321528	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360777_137361143_137361206_137362208_137362320_137363987_137364122_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.18	chr4	+	3586	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-36	12	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	223.123509724359	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	467	False	NA	20	True	AATAAA	-32	NA	137321414	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.180	chr4	+	3361	26	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	8	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_17	456.583952411821	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	581	False	NA	16	True	AATAAA	-28	NA	137321528	137383650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.182	chr4	+	5691	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10	30727	intron_retention	FALSE	non_canonical	0	0	junction_27	325.763254859622	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGACTCTTGGAGTTA	581	False	NA	NA	False	NA	NA	NA	137321528	137416575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.183	chr4	+	3424	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	328.037280046936	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	581	False	NA	9	True	AATAAA	-21	NA	137321528	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.185	chr4	+	5623	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	27	junction_11	376.722631160384	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	581	False	NA	14	True	ATTAAA	-24	NA	137321528	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.186	chr4	+	3513	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-9	9	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_22	341.310019619195	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACGTGTTTCAGATTT	582	False	NA	17	True	AATAAA	-29	NA	137321529	137383651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.187	chr4	+	4968	25	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-9	-459	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	392.257001920368	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTCTTTATGTTTC	582	False	NA	3	True	ATTAAA	-15	NA	137321529	137385382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.188	chr4	+	5018	22	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-9	0	intron_retention	FALSE	canonical	2	4	junction_1	366.940800430271	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	582	False	NA	16	True	ATTAAA	-26	NA	137321529	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.193	chr4	+	2426	12	NNC	ENSMUSG00000043411.16	novel	2071	14	NA	NA	-7	-1666	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	492.51840591524	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAACTCTGTGCTCCA	584	False	NA	NA	False	NA	NA	NA	137321531	137363067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338004_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137344587_137363017
ES.24787.194	chr4	+	5076	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-7	-459	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	331.616226382244	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTCTTTATGTTTC	584	False	NA	3	True	ATTAAA	-15	NA	137321531	137385382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.195	chr4	+	6665	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_11	443.025487969256	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	584	False	NA	9	True	AATAAA	-21	NA	137321531	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137345263_137345514_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.196	chr4	+	3064	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	415.611657183454	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGCATCAGACTTGAAGG	584	False	NA	2	True	AATAAA	-14	NA	137321531	137383636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.199	chr4	+	3488	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_14	330.81255753803	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAAGGACGTGTTTCA	584	False	NA	12	True	AATAAA	-24	NA	137321531	137383646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352626_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.2	chr4	+	5726	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	16	junction_1	323.532283622444	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGGAGTGAGTTCTTTG	98	False	NA	21	True	ATTAAA	-31	NA	137321045	137385846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.200	chr4	+	5738	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-7	30726	intron_retention	FALSE	non_canonical	0	0	junction_28	352.438580189687	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATGACTCTTGGAGTT	584	False	NA	NA	False	NA	NA	NA	137321531	137416574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.201	chr4	+	2019	14	NNC	ENSMUSG00000043411.16	novel	2071	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	352.917292555374	1638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTCCGTGCTTCCA	585	False	NA	NA	False	AATAAA	-6	NA	137321532	137352602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470
ES.24787.202	chr4	+	3320	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	397.267768639743	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	585	False	NA	8	True	AATAAA	-20	NA	137321532	137383642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.203	chr4	+	3569	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	353.066651436599	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGACGTGTTTCAGAT	585	False	NA	15	True	AATAAA	-27	NA	137321532	137383649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335546_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.205	chr4	+	4589	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_26	326.867805282468	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	585	False	NA	16	True	ATTAAA	-26	NA	137321532	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137384498
ES.24787.21	chr4	+	3841	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	-23	1923	-23	277	multi-exon	FALSE	canonical	3	237	junction_13	294.548307788895	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGACTTGCCAACGAGG	480	False	NA	NA	False	AATAAA	-10	NA	137321427	137383919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.210	chr4	+	5545	26	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	-4	intron_retention	FALSE	non_canonical	0	0	junction_17	402.376607669979	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTTTATCCGGAGTG	585	False	NA	12	True	ATTAAA	-22	NA	137321532	137385837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361141_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.213	chr4	+	3152	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-6	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	418.162420498728	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGGACGTGTTTCAGA	585	False	NA	14	True	AATAAA	-26	NA	137321532	137383648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137383432
ES.24787.214	chr4	+	7814	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	0	intron_retention	FALSE	canonical	3	27	junction_11	348.370170998705	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	585	False	NA	16	True	ATTAAA	-26	NA	137321532	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.215	chr4	+	5379	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6	-2	intron_retention	FALSE	canonical	2	8	junction_9	518.271640219254	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	585	False	NA	14	True	ATTAAA	-24	NA	137321532	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137333062_137333220_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343802_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.216	chr4	+	2703	9	NIC	ENSMUSG00000043411.16	novel	2071	14	NA	NA	-5	-5532	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	540.044080955435	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTGCTGCTTAATTTG	586	False	NA	NA	False	NA	NA	NA	137321533	137345149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137338000_137338135_137339016_137339100_137340992_137341173_137343668
ES.24787.217	chr4	+	4835	25	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-5	10	intron_retention	FALSE	canonical	3	659	junction_9	230.73532440993	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	586	False	NA	18	True	AATAAA	-30	NA	137321533	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.219	chr4	+	5779	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	5	junction_19	454.24461784319	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	586	False	NA	15	True	ATTAAA	-25	NA	137321533	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137363987_137364122_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.220	chr4	+	5280	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-5	30724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	348.000813686593	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCATGACTCTTGGAG	586	False	NA	NA	False	NA	NA	NA	137321533	137416572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385381_137416539
ES.24787.221	chr4	+	5178	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-5	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	337.076220902966	1813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTTTATGTTTCCT	586	False	NA	5	True	ATTAAA	-17	NA	137321533	137385384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338016_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.223	chr4	+	4193	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-3	7	intron_retention	FALSE	canonical	3	9	junction_17	424.571486025101	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGACGTGTTTCAGAT	588	False	NA	15	True	AATAAA	-27	NA	137321535	137383649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137361558_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.224	chr4	+	10006	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-3	0	intron_retention	FALSE	non_canonical	1	3	junction_11	358.260582144886	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	588	False	NA	17	True	ATTAAA	-27	NA	137321535	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.225	chr4	+	5762	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-3	-2	intron_retention	FALSE	non_canonical	0	0	junction_23	458.382452995624	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	588	False	NA	14	True	ATTAAA	-24	NA	137321535	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366507_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.23	chr4	+	5762	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	659	junction_9	223.123509724359	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	484	False	NA	22	True	ATTAAA	-32	NA	137321431	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.230	chr4	+	5660	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_21	327.61716364861	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	589	False	NA	16	True	ATTAAA	-26	NA	137321536	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366507_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.232	chr4	+	5132	22	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_17	333.533504523093	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	589	False	NA	16	True	ATTAAA	-26	NA	137321536	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.233	chr4	+	3351	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_21	324.512025046839	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAAGGACGTGTTTCA	589	False	NA	12	True	AATAAA	-24	NA	137321536	137383646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.236	chr4	+	5553	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_10	365.136782346678	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	589	False	NA	17	True	ATTAAA	-27	NA	137321536	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.237	chr4	+	5598	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	7	junction_22	346.497199370497	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	589	False	NA	14	True	ATTAAA	-24	NA	137321536	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.24	chr4	+	3725	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_27	341.118293244855	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	490	False	NA	14	True	ATTAAA	-24	NA	137321437	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137385506
ES.24787.240	chr4	+	9796	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	1	-455	intron_retention	FALSE	canonical	3	26	junction_19	337.111619620031	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTTATGTTTCCTTT	592	False	NA	7	True	ATTAAA	-19	NA	137321539	137385386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.244	chr4	+	5727	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_21	391.937829257069	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	593	False	NA	15	True	ATTAAA	-25	NA	137321540	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365442_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.247	chr4	+	9542	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	7	-456	intron_retention	FALSE	non_canonical	1	3	junction_11	353.75270166728	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTTTATGTTTCCTT	598	False	NA	6	True	ATTAAA	-18	NA	137321545	137385385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.248	chr4	+	3454	26	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	7	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	496.244317247059	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	598	False	NA	16	True	AATAAA	-28	NA	137321545	137383650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362212_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380434_137382533_137382561_137383432
ES.24787.251	chr4	+	7695	26	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	8	10	intron_retention	FALSE	non_canonical	1	3	junction_11	448.536168441297	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	599	False	NA	18	True	AATAAA	-30	NA	137321546	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137345263_137345514_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.252	chr4	+	3109	24	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	8	10	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	315.518327113975	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	599	False	NA	18	True	AATAAA	-30	NA	137321546	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.253	chr4	+	5408	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	8	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	460.654740484189	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACCTTTATCCGGAGTGA	599	False	NA	13	True	ATTAAA	-23	NA	137321546	137385838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355482_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137371651_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.254	chr4	+	3444	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	8	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	331.620496722012	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	599	False	NA	18	True	AATAAA	-30	NA	137321546	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321820_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.255	chr4	+	3872	24	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	9	-4798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	331.830724149532	1738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTGTCCTCTGTTGTC	600	False	NA	NA	False	AATAAA	-12	NA	137321547	137375353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137374510
ES.24787.256	chr4	+	3488	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	9	10	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	353.126463239136	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	600	False	NA	18	True	AATAAA	-30	NA	137321547	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343802_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.258	chr4	+	3738	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	13	289	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	399.609562534652	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGAGGAACGTGTCTTCA	604	False	NA	NA	False	AATAAA	-22	NA	137321551	137383931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.260	chr4	+	3550	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_26	318.136437553777	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	612	False	NA	15	True	ATTAAA	-25	NA	137321559	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137385506
ES.24787.263	chr4	+	3565	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	23	8	combination_of_known_junctions	FALSE	canonical	3	10	junction_25	324.351718019573	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	614	False	NA	16	True	AATAAA	-28	NA	137321561	137383650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.265	chr4	+	5718	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_1	403.358340210394	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	615	False	NA	16	True	ATTAAA	-26	NA	137321562	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137321914_137322011_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.269	chr4	+	3382	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	26	12	combination_of_known_splicesites	FALSE	canonical	3	7	junction_22	351.081052358916	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	617	False	NA	20	True	AATAAA	-32	NA	137321564	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.27	chr4	+	5802	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	555	junction_19	264.570952206992	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	498	False	NA	22	True	ATTAAA	-32	NA	137321445	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.272	chr4	+	5736	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_26	347.841448831759	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	621	False	NA	15	True	ATTAAA	-25	NA	137321568	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382469_137382561_137383432
ES.24787.273	chr4	+	7726	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	30	8	intron_retention	FALSE	non_canonical	0	0	junction_11	337.083209662965	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	621	False	NA	16	True	AATAAA	-28	NA	137321568	137383650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137345263_137345515_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.274	chr4	+	5323	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	30	-2	intron_retention	FALSE	canonical	2	2	junction_20	454.015416328442	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	621	False	NA	14	True	ATTAAA	-24	NA	137321568	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.276	chr4	+	5554	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	31	2	intron_retention	FALSE	canonical	3	45	junction_1	354.847414912132	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCGGAGTGAGTTCTT	622	False	NA	19	True	ATTAAA	-29	NA	137321569	137385844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.279	chr4	+	2278	11	ISM	ENSMUSG00000043411.16	ENSMUST00000105839.8	2071	14	63	8069	42	-6148	5prime_fragment	FALSE	canonical	3	659	junction_9	186.595846684753	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTACACTGTAGCTGTA	633	False	NA	NA	False	TTTAAA	-29	NA	137321580	137344533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668
ES.24787.28	chr4	+	5788	28	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	0	-1	intron_retention	FALSE	canonical	3	19	junction_11	394.370384283607	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	503	False	NA	15	True	ATTAAA	-25	NA	137321450	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.280	chr4	+	3288	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	42	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	317.882806077963	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGACGTGTTTCAGATTT	633	False	NA	17	True	AATAAA	-29	NA	137321580	137383651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.281	chr4	+	3065	23	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	42	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	393.524162573184	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	633	False	NA	20	True	AATAAA	-32	NA	137321580	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137383417
ES.24787.282	chr4	+	3337	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	42	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	391.512071844535	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	633	False	NA	9	True	AATAAA	-21	NA	137321580	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.286	chr4	+	5353	26	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	94	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	343.740367137757	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	685	False	NA	14	True	ATTAAA	-24	NA	137321632	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331911_137333995_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.288	chr4	+	4539	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	127	-452	intron_retention	FALSE	canonical	2	4	junction_1	358.631481128189	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTATGTTTCCTTTTTC	718	False	NA	10	True	ATTAAA	-22	NA	137321665	137385389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.289	chr4	+	10046	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	159	0	intron_retention	FALSE	canonical	3	67	junction_18	369.066381021084	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGAGTGAGTTCTTTGTC	750	False	NA	23	True	ATTAAA	-33	NA	137321697	137385848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.29	chr4	+	5727	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	4	0	intron_retention	FALSE	canonical	3	67	junction_21	367.5961493189	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	507	False	NA	16	True	ATTAAA	-26	NA	137321454	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.291	chr4	+	5537	27	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	290	-2	intron_retention	FALSE	canonical	0	0	junction_1	336.833938419225	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	881	False	NA	14	True	ATTAAA	-24	NA	137321828	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322011_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.292	chr4	+	5239	28	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	705	-455	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	395.448761419344	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTTATGTTTCCTTT	1296	False	NA	7	True	ATTAAA	-19	NA	137322243	137385386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322521_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.293	chr4	+	3471	28	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	731	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	399.2914128467	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGACGTGTTTCAG	1322	False	NA	13	True	AATAAA	-25	NA	137322269	137383647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322521_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.294	chr4	+	3421	27	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	734	12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	331.193799519612	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	1325	False	NA	20	True	AATAAA	-32	NA	137322272	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322521_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.295	chr4	+	5648	28	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	743	-2	intron_retention	FALSE	canonical	2	3	junction_1	357.937844724291	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	1334	False	NA	14	True	ATTAAA	-24	NA	137322281	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322521_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.296	chr4	+	3337	27	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	810	10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	432.120848276027	1770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	1401	False	NA	18	True	AATAAA	-30	NA	137322348	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137322521_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.297	chr4	+	3356	29	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	3309	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	412.604915538497	1770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGGACGTGTTTCAG	3900	False	NA	13	True	AATAAA	-25	NA	137324847	137383647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137324889_137326855_137326951_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.298	chr4	+	6018	27	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	4754	0	intron_retention	FALSE	canonical	0	0	junction_1	331.620496722012	1814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	5345	False	NA	16	True	ATTAAA	-26	NA	137326292	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137326951_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.299	chr4	+	5363	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10293	3	intron_retention	FALSE	canonical	3	584	junction_8	235.922685640868	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCGGAGTGAGTTCTTT	NA	False	NA	20	True	ATTAAA	-30	NA	137331831	137385845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.3	chr4	+	3444	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-20	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	484.528319407331	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	98	False	NA	18	True	AATAAA	-30	NA	137321045	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.30	chr4	+	3478	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	5	12	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	354.847414912132	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	508	False	NA	20	True	AATAAA	-32	NA	137321455	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.302	chr4	+	3104	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	11522	8	combination_of_known_junctions	FALSE	canonical	3	555	junction_17	274.460343219198	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACGTGTTTCAGATT	NA	False	NA	16	True	AATAAA	-28	NA	137333060	137383650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.303	chr4	+	5296	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	11522	-2	intron_retention	FALSE	canonical	3	237	junction_11	334.717877622334	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	NA	False	NA	14	True	ATTAAA	-24	NA	137333060	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.306	chr4	+	5132	25	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-11784	0	intron_retention	FALSE	canonical	3	19	junction_8	463.549797681496	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	NA	False	NA	17	True	ATTAAA	-27	NA	137333997	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.307	chr4	+	2881	23	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-10415	-1	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_22	398.594537559035	1793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	NA	False	NA	15	True	ATTAAA	-25	NA	137335366	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137385506
ES.24787.308	chr4	+	5079	23	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10415	-4	intron_retention	FALSE	canonical	3	10	junction_21	357.725516918413	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTTTATCCGGAGTG	NA	False	NA	12	True	ATTAAA	-22	NA	137335366	137385837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.309	chr4	+	7470	23	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-10380	10	intron_retention	FALSE	canonical	3	10	junction_21	382.589785821415	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	NA	False	NA	18	True	AATAAA	-30	NA	137335401	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.310	chr4	+	9246	20	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-7768	-2	intron_retention	FALSE	canonical	1	8	junction_10	472.324715761428	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	NA	False	NA	14	True	ATTAAA	-24	NA	137338013	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.311	chr4	+	5392	21	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-6726	30723	intron_retention	FALSE	non_canonical	0	0	junction_20	498.343546160678	1844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCATGACTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	137339055	137416571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.313	chr4	+	2478	18	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-4783	288	combination_of_known_splicesites	FALSE	canonical	3	7	junction_13	395.751687202816	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAGGAACGTGTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	137340998	137383930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.314	chr4	+	5334	18	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-4652	-456	intron_retention	FALSE	canonical	3	555	junction_9	328.186017806574	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTTTATGTTTCCTT	NA	False	NA	6	True	ATTAAA	-18	NA	137341129	137385385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.315	chr4	+	2134	18	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-2760	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	378.350682243769	1749	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	NA	False	NA	18	True	AATAAA	-30	NA	137343021	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366518_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.316	chr4	+	4147	18	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-2020	-1	intron_retention	FALSE	canonical	1	8	junction_8	592.076353441428	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	NA	False	NA	15	True	ATTAAA	-25	NA	137343761	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.317	chr4	+	5993	17	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	-1691	-7	intron_retention	FALSE	non_canonical	1	3	junction_1	474.982166606021	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGGACCTTTATCCGGA	NA	False	NA	9	True	ATTAAA	-19	NA	137344090	137385834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137385506
ES.24787.318	chr4	+	6697	17	NNC	ENSMUSG00000043411.16	novel	3392	11	NA	NA	-1675	12	intron_retention	FALSE	non_canonical	1	3	junction_1	406.841065213125	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	NA	False	NA	20	True	AATAAA	-32	NA	137344106	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137345263_137345514_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.32	chr4	+	5413	25	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	8	30725	intron_retention	FALSE	non_canonical	0	0	junction_24	397.218818701425	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATGACTCTTGGAGT	511	False	NA	NA	False	NA	NA	NA	137321458	137416573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.320	chr4	+	6027	16	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-759	6	intron_retention	FALSE	canonical	3	555	junction_8	259.659726051872	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGGACGTGTTTCAGA	NA	False	NA	14	True	AATAAA	-26	NA	137345022	137383648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.321	chr4	+	7121	16	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-490	0	intron_retention	FALSE	canonical	3	67	junction_8	363.735227267796	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	NA	False	NA	17	True	ATTAAA	-27	NA	137345291	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.322	chr4	+	6992	17	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-308	0	intron_retention	FALSE	canonical	3	26	junction_9	402.478648502004	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	137345473	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.324	chr4	+	5808	17	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-260	0	intron_retention	FALSE	canonical	1	4	junction_15	425.839299941891	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	137346778	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380434_137382533_137382561_137383432
ES.24787.325	chr4	+	8943	14	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-95	0	intron_retention	FALSE	canonical	3	9	junction_6	403.424219143715	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	137346943	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137361558_137362208_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.326	chr4	+	5090	18	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	19	-457	intron_retention	FALSE	canonical	2	5	junction_9	483.456556698255	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTTTATGTTTCCT	NA	False	NA	5	True	ATTAAA	-17	NA	137347057	137385384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137363987_137364122_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.327	chr4	+	3998	15	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	125	1	intron_retention	FALSE	canonical	3	682	junction_8	239.308069318225	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	NA	False	NA	9	True	AATAAA	-21	NA	137347163	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.328	chr4	+	4606	16	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	25904	460	316	-459	3prime_fragment	FALSE	canonical	3	237	junction_2	351.948796780946	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTCTTTATGTTTC	NA	False	NA	3	True	ATTAAA	-15	NA	137347354	137385382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.329	chr4	+	5091	17	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	316	30724	intron_retention	FALSE	non_canonical	0	0	junction_16	395.005849442448	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCATGACTCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	137347354	137416572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.330	chr4	+	5028	17	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	527	-2	intron_retention	FALSE	canonical	3	10	junction_15	491.885081694647	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	NA	False	NA	14	True	ATTAAA	-24	NA	137347565	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.331	chr4	+	5360	15	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-694	0	intron_retention	FALSE	canonical	3	9	junction_6	417.976692300088	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	137347775	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137361558_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.332	chr4	+	5420	15	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-595	-1	intron_retention	FALSE	canonical	3	682	junction_8	238.065642208194	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	NA	False	NA	22	True	ATTAAA	-32	NA	137347874	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533
ES.24787.333	chr4	+	2214	16	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-340	10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	399.250275168624	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	NA	False	NA	18	True	AATAAA	-30	NA	137348129	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380434_137382533_137382561_137383432
ES.24787.334	chr4	+	4116	16	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-174	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	485.809153200445	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	NA	False	NA	14	True	ATTAAA	-24	NA	137348295	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362206_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.336	chr4	+	4863	16	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	56	-1	intron_retention	FALSE	canonical	0	0	junction_8	504.285166239191	1754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	NA	False	NA	15	True	ATTAAA	-25	NA	137348525	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137361758_137361860_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533
ES.24787.337	chr4	+	3488	14	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-97	12	intron_retention	FALSE	canonical	3	555	junction_6	276.98448037185	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	NA	False	NA	20	True	AATAAA	-32	NA	137350584	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.338	chr4	+	2869	13	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	94	10	intron_retention	FALSE	canonical	3	555	junction_4	337.921958446029	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	NA	False	NA	18	True	AATAAA	-30	NA	137352567	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137352599_137355484_137355557_137360424_137360550_137360653_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.339	chr4	+	3659	14	ISM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	33965	1	3009	0	3prime_fragment	FALSE	canonical	3	555	junction_5	324.645806084545	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	137355482	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.34	chr4	+	5326	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	11	-454	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTTATGTTTCCTTTT	514	False	NA	8	True	ATTAAA	-20	NA	137321461	137385387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.340	chr4	+	3763	14	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	3014	30728	intron_retention	FALSE	non_canonical	0	0	junction_13	537.104630975553	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGACTCTTGGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	137355487	137416576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432_137385838_137416539
ES.24787.341	chr4	+	156	1	Intergenic	novelGene_20448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1587	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	137357333	137357489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137357300_137357500
ES.24787.342	chr4	+	3465	13	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-28	30725	intron_retention	FALSE	non_canonical	0	0	junction_12	646.177392224629	1801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATGACTCTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	137360716	137416573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137360777_137361143_137361206_137361465_137361558_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.343	chr4	+	4384	9	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-102	0	intron_retention	FALSE	canonical	3	682	junction_1	277.147523892962	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	NA	False	NA	17	True	ATTAAA	-27	NA	137361046	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.345	chr4	+	3515	9	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	1136	-456	intron_retention	FALSE	canonical	3	555	junction_1	318.488397551622	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTTTATGTTTCCTT	NA	False	NA	6	True	ATTAAA	-18	NA	137362284	137385385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.346	chr4	+	6248	1	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	1526	-456	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1740	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTTTATGTTTCCTT	NA	False	NA	6	True	ATTAAA	-18	NA	137379137	137385385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137379100_137385400
ES.24787.347	chr4	+	4101	1	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-2967	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1743	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	NA	False	NA	14	True	ATTAAA	-24	NA	137381738	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137381700_137385800
ES.24787.348	chr4	+	3122	2	ISM	ENSMUSG00000043411.16	ENSMUST00000157012.3	468	4	4235	-2198	-2859	-1	3prime_fragment	FALSE	canonical	3	1520	junction_1	0	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	NA	False	NA	15	True	ATTAAA	-25	NA	137381846	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137382561_137383432
ES.24787.349	chr4	+	171	1	Intergenic	novelGene_20449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACTGAATTCAAG	1609	False	NA	NA	False	NA	NA	NA	137390308	137390479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137390300_137390500
ES.24787.350	chr4	+	3281	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	41.4733385102208	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGAACAGCTTTGTGT	3334	False	NA	16	True	AATAAA	-26	NA	137392033	137457177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.351	chr4	+	3297	24	NNC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	41.8717548752462	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	3337	False	NA	9	True	AATAAA	-19	NA	137392036	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455781_137455880_137456185
ES.24787.352	chr4	+	7199	20	NIC	ENSMUSG00000041351.17	novel	756	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_1	40.7190223502902	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	3338	False	NA	9	True	AATAAA	-19	NA	137392037	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446711_137447220_137447308_137447604_137447743_137449136_137452113_137452860_137452975_137454262_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.353	chr4	+	4442	1	NIC	ENSMUSG00000041351.17	novel	756	9	NA	NA	5	-42670	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTATGGGGGACTGGA	3342	False	NA	NA	False	NA	NA	NA	137392041	137396483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392000_137396500
ES.24787.354	chr4	+	3304	25	NNC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.234094042977	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3343	False	NA	10	True	AATAAA	-20	NA	137392042	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137392156_137403246_137403340_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455675_137455838_137455880_137456185
ES.24787.355	chr4	+	3271	25	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	42.7395008224892	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3343	False	NA	10	True	AATAAA	-20	NA	137392042	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137410771_137410808_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.356	chr4	+	3233	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	40.9493208845687	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3345	False	NA	10	True	AATAAA	-20	NA	137392044	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.358	chr4	+	3257	25	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	41.8223549671704	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	3345	False	NA	9	True	AATAAA	-19	NA	137392044	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137455040_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.359	chr4	+	3210	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_20	42.0630097162509	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3346	False	NA	10	True	AATAAA	-20	NA	137392045	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137455040_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.361	chr4	+	3300	25	NNC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.8906069747989	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	3354	False	NA	10	True	AATAAA	-20	NA	137392053	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137392160_137431390_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.362	chr4	+	206	1	Intergenic	novelGene_20450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAGATAAATA	8726	False	NA	NA	False	NA	NA	NA	137397425	137397631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137397400_137397600
ES.24787.363	chr4	+	3706	22	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-59	0	intron_retention	FALSE	canonical	3	26	junction_1	41.4923974677175	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	9891	False	NA	10	True	AATAAA	-20	NA	137434773	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455675_137455838_137455880_137456185
ES.24787.364	chr4	+	3565	21	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-58	-2	intron_retention	FALSE	canonical	0	0	junction_4	48.5081436461961	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCGGAGTTAAGAACAG	9892	False	NA	8	True	AATAAA	-18	NA	137434774	137457169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439411_137439512_137443052_137443157_137443830_137443912_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455675_137455838_137455880_137456185
ES.24787.365	chr4	+	3228	23	FSM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	-54	-6	-54	6	multi-exon	FALSE	canonical	3	26	junction_1	40.603123480388	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAACAGCTTTGTGTA	9896	False	NA	17	True	AATAAA	-27	NA	137434778	137457178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.366	chr4	+	3252	23	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	41.2645416392114	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9897	False	NA	11	True	AATAAA	-21	NA	137434779	137457172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.367	chr4	+	3182	23	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	43.2237117355549	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACCCGGAGTTAAGAACA	9901	False	NA	7	True	AATAAA	-17	NA	137434783	137457168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455060_137455570_137455675_137455838_137455880_137456185
ES.24787.368	chr4	+	3184	23	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	43.0809347873135	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	9908	False	NA	9	True	AATAAA	-19	NA	137434790	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455675_137455838_137455880_137456185
ES.24787.369	chr4	+	5367	16	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-2775	-1	intron_retention	FALSE	canonical	3	31	junction_2	43.2679506743219	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137443407	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.370	chr4	+	2563	15	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	9794	2	-1556	-1	3prime_fragment	FALSE	canonical	3	33	junction_2	41.2145332995782	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137444626	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.371	chr4	+	2565	15	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	-1526	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	43.5771073582711	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137444656	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.372	chr4	+	2376	14	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	-1182	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	46.6476151587624	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCGGAGTTAAGAACAG	NA	False	NA	8	True	AATAAA	-18	NA	137445000	137457169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455675_137455838_137455880_137456185
ES.24787.373	chr4	+	2351	13	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	10339	1	-1011	0	3prime_fragment	FALSE	canonical	3	34	junction_1	36.9128101823142	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137445171	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.374	chr4	+	2597	12	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	7	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	44.3684796164019	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137446189	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455151_137455195_137455675_137455838_137455880_137456185
ES.24787.375	chr4	+	2087	11	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	11730	1	380	0	3prime_fragment	FALSE	canonical	3	50	junction_1	27.2552747188503	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137446562	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.376	chr4	+	2080	10	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	12247	1	897	0	3prime_fragment	FALSE	canonical	3	83	junction_7	18.9326290948839	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447079	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.377	chr4	+	3158	8	NNC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	901	-1	intron_retention	FALSE	canonical	0	0	junction_4	56.2820883531142	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137447083	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452117_137452860_137452975_137454264_137455675_137455838_137455880_137456185
ES.24787.378	chr4	+	2437	10	NNC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	971	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.7638578134505	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447153	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452864_137452975_137454262_137454387_137454987_137455151_137455195_137455675_137455838_137455880_137456185
ES.24787.379	chr4	+	1992	10	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	1016	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	31.0304509939654	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447198	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
ES.24787.38	chr4	+	5751	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	16	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	383.354524374012	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	519	False	NA	14	True	ATTAAA	-24	NA	137321466	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341148_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.383	chr4	+	2559	8	NIC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	1062	0	intron_retention	FALSE	canonical	3	96	junction_1	16.115653437397	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	False	NA	10	True	AATAAA	-20	NA	137447244	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455880_137456185
ES.24787.385	chr4	+	3339	7	NNC	ENSMUSG00000041351.17	novel	2317	7	NA	NA	-620	-1	intron_retention	FALSE	canonical	0	0	junction_4	48.9344800047301	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137450679	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137452113_137452860_137452975_137454262_137454387_137454987_137455151_137455195_137455675_137455838_137455880_137456185
ES.24787.386	chr4	+	1805	7	ISM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	16946	2	479	-1	3prime_fragment	FALSE	canonical	3	83	junction_4	20.1218510303821	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCGGAGTTAAGAACAGC	NA	False	NA	9	True	AATAAA	-19	NA	137451778	137457170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ES.24787.387	chr4	+	3793	3	NNC	ENSMUSG00000041351.17	novel	2317	7	NA	NA	-593	0	intron_retention	FALSE	canonical	0	0	junction_2	71.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	NA	False	NA	11	True	AATAAA	-21	NA	137452046	137457172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137452975_137454262_137455151_137455195
ES.24787.388	chr4	+	2408	4	NNC	ENSMUSG00000041351.17	novel	3247	25	NA	NA	-824	0	intron_retention	FALSE	canonical	0	0	junction_1	62.2914297654358	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	921	False	NA	10	True	AATAAA	-20	NA	137454248	137457171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137455151_137455195_137455675_137455838_137455880_137456185
ES.24787.39	chr4	+	5758	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	17	0	intron_retention	FALSE	canonical	2	8	junction_11	399.124652633976	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	520	False	NA	17	True	ATTAAA	-27	NA	137321467	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343802_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.4	chr4	+	3588	29	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-20	12	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	346.032431829086	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	98	False	NA	20	True	AATAAA	-32	NA	137321045	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.40	chr4	+	3343	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	19	1	combination_of_known_splicesites	FALSE	canonical	1	17	junction_4	408.44333560483	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTGAAGGACGTGTT	522	False	NA	9	True	AATAAA	-21	NA	137321469	137383643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.41	chr4	+	8082	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	19	12	intron_retention	FALSE	canonical	3	584	junction_9	236.010521799347	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	522	False	NA	20	True	AATAAA	-32	NA	137321469	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.47	chr4	+	3448	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	25	7423	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	220.070593482415	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGGTTATTCATATGAA	528	False	NA	NA	False	NA	NA	NA	137321475	137372156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653
ES.24787.48	chr4	+	5695	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	25	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	409.162185186977	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTATCCGGAGTGAG	528	False	NA	14	True	ATTAAA	-24	NA	137321475	137385839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343814_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360543_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.49	chr4	+	3000	22	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	384.066834461573	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	528	False	NA	8	True	AATAAA	-20	NA	137321475	137383642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.5	chr4	+	5237	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	9	-455	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	323.532283622444	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTTATGTTTCCTTT	127	False	NA	7	True	ATTAAA	-19	NA	137321074	137385386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.50	chr4	+	3842	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	-42	1922	25	278	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACTTGCCAACGAGGA	528	False	NA	NA	False	AATAAA	-11	NA	137321475	137383920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.51	chr4	+	5242	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	25	-458	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_21	323.528237886678	1813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTCTTTATGTTTCC	528	False	NA	4	True	ATTAAA	-16	NA	137321475	137385383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.52	chr4	+	5705	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	25	0	intron_retention	FALSE	non_canonical	0	0	junction_2	380.221994094107	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	528	False	NA	17	True	ATTAAA	-27	NA	137321475	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333073_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.53	chr4	+	3572	28	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	25	4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_11	431.512957046211	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAAGGACGTGTTTCA	528	False	NA	12	True	AATAAA	-24	NA	137321475	137383646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.54	chr4	+	5688	26	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	26	-1	intron_retention	FALSE	non_canonical	0	0	junction_25	326.465444419467	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	529	False	NA	15	True	ATTAAA	-25	NA	137321476	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380323_137383432
ES.24787.55	chr4	+	5253	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	26	-455	combination_of_known_junctions	FALSE	canonical	3	584	junction_9	231.427832630339	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTTTATGTTTCCTTT	529	False	NA	7	True	ATTAAA	-19	NA	137321476	137385386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.57	chr4	+	5630	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	26	30724	intron_retention	FALSE	non_canonical	0	0	junction_5	459.978931347894	1867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCATGACTCTTGGAG	529	False	NA	NA	False	NA	NA	NA	137321476	137416572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335486_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.6	chr4	+	5717	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_1	352.438580189687	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGAGTGAGTTCTTTGT	128	False	NA	22	True	ATTAAA	-32	NA	137321075	137385847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321163_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.61	chr4	+	5660	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_17	389.83958163363	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	532	False	NA	16	True	ATTAAA	-26	NA	137321479	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361183_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.64	chr4	+	5365	24	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	30	0	intron_retention	FALSE	canonical	2	2	junction_19	315.518327113975	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	533	False	NA	17	True	ATTAAA	-27	NA	137321480	137385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.66	chr4	+	8892	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-31	10	intron_retention	FALSE	canonical	3	237	junction_12	316.710729846654	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	539	False	NA	18	True	AATAAA	-30	NA	137321486	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.67	chr4	+	3457	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-31	-99	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAACTCTTACCTGGCT	539	False	NA	-91	True	ATTAAA	-18	NA	137321486	137383543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.68	chr4	+	3331	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-31	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.000813686593	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	539	False	NA	20	True	AATAAA	-32	NA	137321486	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321520_137321756_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.69	chr4	+	5045	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-30	-457	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	433.331533124466	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTTTATGTTTCCT	540	False	NA	5	True	ATTAAA	-17	NA	137321487	137385384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137333062_137333220_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.70	chr4	+	6413	1	NIC	ENSMUSG00000043411.16	novel	619	4	NA	NA	-30	-5319	mono-exon	FALSE	NA	NA	NA	NA	NA	1404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGGGGAGGAGGGTGG	540	False	NA	NA	False	NA	NA	NA	137321487	137327900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321500_137327900
ES.24787.71	chr4	+	5808	29	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-29	0	intron_retention	FALSE	canonical	3	19	junction_11	441.332182899985	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	541	False	NA	16	True	ATTAAA	-26	NA	137321488	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137347233_137347286_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.73	chr4	+	5712	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-28	-3	intron_retention	FALSE	canonical	3	27	junction_11	397.084605359416	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACCTTTATCCGGAGTGA	542	False	NA	13	True	ATTAAA	-23	NA	137321489	137385838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343782_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.75	chr4	+	4325	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-25	3	intron_retention	FALSE	canonical	3	555	junction_19	237.055972343387	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAAGGACGTGTTTC	545	False	NA	11	True	AATAAA	-23	NA	137321492	137383645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.76	chr4	+	9792	26	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-25	-457	intron_retention	FALSE	canonical	3	659	junction_9	227.539724883371	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTTTATGTTTCCT	545	False	NA	5	True	ATTAAA	-17	NA	137321492	137385384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.77	chr4	+	3581	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-23	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	354.514277729198	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	547	False	NA	20	True	AATAAA	-32	NA	137321494	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365442_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.78	chr4	+	3546	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-23	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	334.442081940714	1772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAAGGACGTGTTTCA	547	False	NA	12	True	AATAAA	-24	NA	137321494	137383646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364293_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.8	chr4	+	5745	29	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	10	0	intron_retention	FALSE	canonical	3	16	junction_1	346.032431829086	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	128	False	NA	16	True	ATTAAA	-26	NA	137321075	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.80	chr4	+	5363	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-20	-457	combination_of_known_junctions	FALSE	canonical	3	10	junction_25	324.351718019573	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTTTATGTTTCCT	550	False	NA	5	True	ATTAAA	-17	NA	137321497	137385384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382403_137382561_137383432
ES.24787.81	chr4	+	3614	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-20	10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	330.446425667893	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	550	False	NA	18	True	AATAAA	-30	NA	137321497	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380434_137382533_137382561_137383432
ES.24787.87	chr4	+	5571	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_12	339.508925361322	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCCGGAGTGAGTT	551	False	NA	16	True	ATTAAA	-26	NA	137321498	137385841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.89	chr4	+	7386	26	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	555	junction_19	236.414733889409	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTATCCGGAGTGAGT	551	False	NA	15	True	ATTAAA	-25	NA	137321498	137385840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533
ES.24787.9	chr4	+	5776	30	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	11	30727	intron_retention	FALSE	non_canonical	0	0	junction_29	404.776458029651	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGACTCTTGGAGTTA	129	False	NA	NA	False	NA	NA	NA	137321076	137416575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432_137385838_137416539
ES.24787.92	chr4	+	3393	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-19	-97	combination_of_known_junctions	FALSE	canonical	3	659	junction_9	223.123509724359	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTCTTACCTGGCTCT	551	False	NA	-89	True	ATTAAA	-20	NA	137321498	137383545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.96	chr4	+	4285	27	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	-15	10	intron_retention	FALSE	canonical	1	3	junction_9	448.591512040248	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGTGTTTCAGATTTT	555	False	NA	18	True	AATAAA	-30	NA	137321502	137383652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341189_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137361558_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.97	chr4	+	2970	23	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-15	12	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	410.730713495186	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTGTTTCAGATTTTCT	555	False	NA	20	True	AATAAA	-32	NA	137321502	137383654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137321828_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24787.99	chr4	+	5355	24	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	-15	-3	intron_retention	FALSE	canonical	2	2	junction_19	386.253856405217	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACCTTTATCCGGAGTGA	555	False	NA	13	True	ATTAAA	-23	NA	137321502	137385838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341189_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ES.24788.1	chr4	-	4522	1	Intergenic	novelGene_20445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGAGGATATTCCAC	7488	False	NA	NA	False	NA	NA	NA	137328653	137324131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137324100_137328700
ES.24789.1	chr4	-	151	1	Intergenic	novelGene_20446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	2757	False	NA	NA	False	NA	NA	NA	137342500	137342349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137342300_137342500
ES.2479.1	chr10	-	3119	25	FSM	ENSMUSG00000037370.14	ENSMUST00000105520.8	6777	25	161	3497	0	24	multi-exon	FALSE	canonical	0	0	junction_2	1.10554159678513	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGGAAAATGGTT	7908	False	NA	NA	False	AATAAA	-38	NA	24587895	24517308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24533736_24533769_24536047_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906_24545017_24545577_24545698_24545840_24545921_24547912_24548011_24550512_24550574_24551875_24552002_24553810_24553928_24555085_24555159_24587703
ES.24790.1	chr4	-	180	1	Intergenic	novelGene_20447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	137345391	137345211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137345200_137345400
ES.24791.1	chr4	-	3476	2	Antisense	novelGene_ENSMUSG00000043411.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGACACCTGGTTGACA	NA	False	NA	NA	False	NA	NA	NA	137366211	137362471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_137365199_137365462
ES.24792.1	chr4	-	185	1	Intergenic	novelGene_20451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGTGGATAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	137453616	137453431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137453400_137453600
ES.24793.1	chr4	+	1376	3	Antisense	novelGene_ENSMUSG00000028766.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTTTCTTTCTTT	NA	False	NA	NA	False	ATTAAA	-3	NA	137466712	137469122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_137466988_137467934_137468018_137468104
ES.24794.1	chr4	+	175	1	Intergenic	novelGene_20454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTCAGGGCCA	8479	False	NA	NA	False	NA	NA	NA	137519563	137519738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137519600_137519700
ES.24795.1	chr4	-	2592	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	-68	-2	-68	2	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTCTTTGTGGTCAG	NA	False	NA	0	True	AATAAA	-26	NA	137523763	137469041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.10	chr4	-	7044	9	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	41	-9	intron_retention	FALSE	canonical	3	1320	junction_8	112.149453855112	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523654	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137471138_137473703_137475140_137476859_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.11	chr4	-	1892	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	69	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	462.896682687374	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523626	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137469462_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.13	chr4	-	2439	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	67	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	462.91114403601	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523628	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485889_137486044_137523552
ES.24795.15	chr4	-	2319	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	33	-9	combination_of_known_splicesites	FALSE	canonical	2	49	junction_10	469.73486138459	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523662	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137523552
ES.24795.16	chr4	-	2527	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	461.672901271663	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523705	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471135_137473696_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.17	chr4	-	2742	13	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	54	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	596.151564201588	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523641	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137512606_137512890_137523552
ES.24795.2	chr4	-	2598	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	104	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	462.517312608739	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523437	137469043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523218
ES.24795.20	chr4	-	2434	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	69	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	463.737742926836	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137523626	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470505_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.21	chr4	-	2618	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	2242	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	462.517312608739	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137521299	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137521051
ES.24795.22	chr4	-	2230	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	7835	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	462.517312608739	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGCCAGAGCTGAGTC	NA	False	NA	-11	True	AATAAA	-15	NA	137485951	137469052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137469838_137469885_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882
ES.24795.23	chr4	-	6742	9	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	49	-10	intron_retention	FALSE	canonical	3	1320	junction_8	114.163739317701	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCCAGAGCTGAGT	NA	False	NA	-12	True	AATAAA	-14	NA	137523646	137469053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.24	chr4	-	2961	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	328	-10	intron_retention	FALSE	canonical	3	28	junction_10	476.678508011427	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCCAGAGCTGAGT	NA	False	NA	-12	True	AATAAA	-14	NA	137523213	137469053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523103
ES.24795.25	chr4	-	2902	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-22	-12	intron_retention	FALSE	canonical	3	26	junction_10	477.272626493496	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAGGCCAGAGCTGA	NA	False	NA	-14	True	AATAAA	-12	NA	137509524	137469055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137509471
ES.24795.27	chr4	-	2424	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	65	-16	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	457.851991675248	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTGAGGCCAGAG	NA	False	NA	-18	True	AATAAA	-8	NA	137523630	137469059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137469997_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.28	chr4	-	2582	12	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-51	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	462.517312608739	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTGAGGCCAGAG	NA	False	NA	-18	True	AATAAA	-8	NA	137493837	137469059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137493618
ES.24795.29	chr4	-	2442	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	52	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	610.306846005345	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTGAGGCCAGAG	NA	False	NA	-18	True	AATAAA	-8	NA	137523643	137469059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471131_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482507_137482940_137483061_137485882_137486044_137523552
ES.24795.3	chr4	-	2930	12	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	454.571581067327	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523654	137469043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523103
ES.24795.30	chr4	-	2433	12	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	67	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	458.398163208643	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTGAGGCCAGAG	NA	False	NA	-18	True	AATAAA	-8	NA	137523628	137469059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476865_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.31	chr4	-	2794	10	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	33	-16	intron_retention	FALSE	canonical	2	49	junction_9	495.011510029543	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTCTGAGGCCAGAG	NA	False	NA	-18	True	AATAAA	-8	NA	137523662	137469059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137523552
ES.24795.34	chr4	-	5093	10	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	68	-409	intron_retention	FALSE	canonical	3	1320	junction_9	113.329411696856	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCATGGAACATTCCAGA	NA	False	NA	NA	False	AATATA	-18	NA	137523627	137469452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.35	chr4	-	1326	3	ISM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	46790	3585	-2447	1102	internal_fragment	FALSE	canonical	3	1660	junction_2	6.5	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	137476905	137472628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_137473839_137475069_137475140_137476859
ES.24795.36	chr4	-	3744	1	Intergenic	novelGene_20452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGCTCAGGGGAACTG	NA	False	NA	NA	False	NA	NA	NA	137519157	137515413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137515400_137519200
ES.24795.37	chr4	-	3650	2	Intergenic	novelGene_20453	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACGGCT	NA	False	NA	NA	False	NA	NA	NA	137519158	137515424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137517133_137517216
ES.24795.38	chr4	-	5151	1	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-70	-32474	mono-exon	FALSE	NA	NA	NA	NA	NA	1143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCACTGTGTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	137523611	137518460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137518500_137523600
ES.24795.4	chr4	-	3029	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-25	0	intron_retention	FALSE	canonical	3	1320	junction_10	107.525624852869	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523720	137469043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ES.24795.6	chr4	-	1983	10	NNC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-7984	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	507.126204858634	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGAGCTGAGTCTTTG	NA	False	NA	-7	True	AATAAA	-19	NA	137482442	137469048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137469323_137469363_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395
ES.24795.8	chr4	-	2434	12	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	-32	-8	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	455.139012457905	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCCAGAGCTGAGTCT	NA	False	NA	-10	True	AATAAA	-16	NA	137509534	137469051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137509471
ES.24796.1	chr4	+	4607	3	Intergenic	novelGene_20455	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAAAGACAGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	137527762	137542083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137527939_137536696_137536758_137537713
ES.24796.2	chr4	+	5474	2	Intergenic	novelGene_20456	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137527871	137542062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137527939_137536655
ES.24797.1	chr4	-	162	1	Intergenic	novelGene_20457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATTAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	137538318	137538156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137538200_137538300
ES.24798.1	chr4	+	155	1	Intergenic	novelGene_20458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	137542469	137542624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137542500_137542600
ES.24799.1	chr4	+	4752	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	-20	2	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTGTGTGTCTGTC	NA	False	NA	18	True	AATAAA	-18	NA	137589527	137692542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.10	chr4	+	4757	19	NNC	ENSMUSG00000057530.15	novel	321	3	NA	NA	-5080	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1609123761019	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGTGTGTCTGTCC	8865	False	NA	19	True	AATAAA	-19	NA	137635701	137692543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137635871_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.11	chr4	+	2844	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	24	-1876	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAAGAT	480	False	NA	NA	False	AATACA	-44	NA	137640805	137690664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.12	chr4	+	4720	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	480	False	NA	16	True	AATAAA	-16	NA	137640805	137692540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.2	chr4	+	4633	18	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	-18	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	18.66699620734	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCAGTGTGTCTGTGTG	NA	False	NA	12	True	AATAAA	-12	NA	137589529	137692536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.3	chr4	+	2759	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	5	-1966	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATATTTTTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	137589552	137690574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.4	chr4	+	4786	20	FSM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	28	2	28	-2	multi-exon	FALSE	canonical	1	1	junction_1	20.7320325707644	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGTGTGTCTGTGTGTC	NA	False	NA	14	True	AATAAA	-14	NA	137589575	137692538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137589693_137632380_137632467_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.6	chr4	+	4539	18	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	18.4022715613023	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCAGTGTGTCTGTGTG	NA	False	NA	12	True	AATAAA	-12	NA	137589592	137692536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137589693_137641078_137641166_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.7	chr4	+	4422	17	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.5016740270752	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTGTCTGTGTGTCT	NA	False	NA	15	True	AATAAA	-15	NA	137589625	137692539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137589693_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.8	chr4	+	4806	19	NNC	ENSMUSG00000057530.15	novel	321	3	NA	NA	7929	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.1609123761019	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCAGTGTGTCTGT	2582	False	NA	9	True	AATAAA	-9	NA	137597536	137692533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137597765_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ES.24799.9	chr4	+	158	1	Intergenic	novelGene_20459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATATT	8822	False	NA	NA	False	NA	NA	NA	137603776	137603934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137603800_137603900
ES.248.1	chr1	-	1006	4	NNC	ENSMUSG00000037503.13	novel	525	3	NA	NA	3	10208	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	220.768355220278	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCATCACAAATGGA	NA	False	NA	NA	False	AGTAAA	-14	NA	34882112	34842091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34842732_34867847_34867929_34875813_34875895_34881908
ES.248.10	chr1	-	6469	6	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	412	junction_2	26.7686383665662	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882120	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.11	chr1	-	4974	7	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	209.276266106684	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882115	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859045_34867847_34867929_34875813_34875895_34881908
ES.248.12	chr1	-	5638	7	NNC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_5	222.673902078054	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882099	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34876687_34876751_34881908
ES.248.13	chr1	-	4888	7	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	172.840003085705	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882093	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859002_34867847_34867929_34875813_34875895_34881908
ES.248.14	chr1	-	4893	7	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	214.404925834791	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882077	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859002_34867847_34867929_34875813_34875895_34881908
ES.248.16	chr1	-	5576	6	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	412	junction_2	30.3868392564939	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882101	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.17	chr1	-	5038	8	FSM	ENSMUSG00000037503.13	ENSMUST00000167518.8	5058	8	12	8	-4	-1	multi-exon	FALSE	canonical	0	0	junction_4	208.281990952415	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882119	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ES.248.18	chr1	-	5006	8	NNC	ENSMUSG00000037503.13	novel	5058	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	208.729294463779	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882086	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867659_34867697_34867847_34867929_34875813_34875895_34881908
ES.248.19	chr1	-	5687	5	NIC	ENSMUSG00000037503.13	novel	844	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	459	junction_4	14.2126704035519	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882115	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34857208_34858672_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.2	chr1	-	5060	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	-21	-9	-21	2	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCGTGGGAGTGTTTTC	NA	False	NA	2	True	AATAAA	-27	NA	34882167	34852297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.20	chr1	-	5607	7	FSM	ENSMUSG00000037503.13	ENSMUST00000191307.7	844	7	19	-4782	-2	-1	multi-exon	FALSE	canonical	0	0	junction_3	218.505275807143	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882096	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ES.248.21	chr1	-	5041	8	NIC	ENSMUSG00000037503.13	novel	5058	8	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	227.592815782745	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	False	NA	-8	True	AATAAA	-17	NA	34882101	34852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ES.248.22	chr1	-	4872	6	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	185.797093626354	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGACCTTTTCGTG	NA	False	NA	-9	True	AATAAA	-16	NA	34882120	34852308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.23	chr1	-	4877	7	NNC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	172.353077527886	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGACCTTTTCGTG	NA	False	NA	-9	True	AATAAA	-16	NA	34882100	34852308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34856486_34857077_34857172_34858741_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.25	chr1	-	4917	6	NIC	ENSMUSG00000037503.13	novel	941	7	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	2	34	junction_4	213.281972984123	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTCTGACCTTTTCGT	NA	False	NA	-10	True	AATAAA	-15	NA	34882096	34852309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34875813_34875895_34881908
ES.248.26	chr1	-	7010	5	NIC	ENSMUSG00000037503.13	novel	941	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	35	junction_1	191.119726872974	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTCTGACCTTTTCGT	NA	False	NA	-10	True	AATAAA	-15	NA	34882051	34852309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.28	chr1	-	6502	7	NIC	ENSMUSG00000037503.13	novel	5058	8	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_3	225.441542065541	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATTCTGACCTTTTCGT	NA	False	NA	-10	True	AATAAA	-15	NA	34882099	34852309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34858872_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ES.248.29	chr1	-	6170	4	ISM	ENSMUSG00000037503.13	ENSMUST00000167518.8	5058	8	21497	11	21411	-4	3prime_fragment	FALSE	canonical	3	412	junction_3	34.7658836600865	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATTCTGACCTTTTCG	NA	False	NA	-11	True	AATAAA	-14	NA	34860634	34852310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947
ES.248.30	chr1	-	1734	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	22	3274	7	735	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGTGTTGTCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	34882124	34855580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.31	chr1	-	1743	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	-69	-733	1	733	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGTGTTGTCTTTTG	NA	False	NA	NA	False	AGTAAA	-44	NA	34882114	34855582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.32	chr1	-	2285	6	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	-9	715	intron_retention	FALSE	canonical	3	412	junction_2	30.3868392564939	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGCAGCCACACTG	NA	False	NA	NA	False	AGTAAA	-26	NA	34882103	34855600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.33	chr1	-	1164	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	7	3859	7	150	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTGATGCAAAACCAT	NA	False	NA	0	True	TATAAA	-36	NA	34882139	34856165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.34	chr1	-	875	5	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	7	84	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	198.023988445845	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATCTAGTTGAATGC	NA	False	NA	-7	True	GATAAA	-23	NA	34882078	34856231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34881908
ES.248.35	chr1	-	996	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	49	3985	-3	24	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTGGCAAATTTTTTA	NA	False	NA	-67	True	TTTAAA	-19	NA	34882097	34856291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.4	chr1	-	5000	7	FSM	ENSMUSG00000037503.13	ENSMUST00000185469.7	778	7	-91	-4131	-11	-2	multi-exon	TRUE	canonical	3	22	junction_4	165.108802511152	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTTTCGTGGGAGTGT	NA	False	NA	-2	True	AATAAA	-23	NA	34882157	34852301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859045_34867847_34867929_34875813_34875895_34881908
ES.248.5	chr1	-	7034	5	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	3	2	intron_retention	FALSE	canonical	3	412	junction_1	29.608909132219	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTTTTCGTGGGAG	NA	False	NA	-5	True	AATAAA	-20	NA	34882091	34852304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.6	chr1	-	4866	5	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	198.023988445845	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACCTTTTCGTGGGA	NA	False	NA	-6	True	AATAAA	-19	NA	34882143	34852305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34881908
ES.248.7	chr1	-	4678	6	NNC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	21	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	189.201479909646	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACCTTTTCGTGGGA	NA	False	NA	-6	True	AATAAA	-19	NA	34882024	34852305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_34856486_34857077_34857208_34858672_34858817_34867901_34867929_34875813_34875895_34881908
ES.248.8	chr1	-	5052	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	-102	-4009	-1	0	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882147	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ES.248.9	chr1	-	5086	6	NIC	ENSMUSG00000037503.13	novel	5030	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	450	junction_1	17.7583783043385	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882105	34852306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_34856486_34857077_34857208_34858672_34859091_34867847_34867929_34875813_34875895_34881908
ES.2480.1	chr10	+	161	1	Intergenic	novelGene_1881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	24590366	24590527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_24590400_24590500
ES.24800.1	chr4	-	877	3	FSM	ENSMUSG00000085823.8	ENSMUST00000155349.8	849	3	-29	1	-18	-1	multi-exon	FALSE	canonical	2	3	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGTTTTGCCTTCATG	NA	False	NA	NA	False	ATTAAA	-15	NA	137611266	137609681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_137610210_137610538_137610721_137611099
ES.24800.2	chr4	-	809	3	NNC	ENSMUSG00000085823.8	novel	849	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	4.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGTTTTGCCTTCATG	NA	False	NA	NA	False	ATTAAA	-15	NA	137611241	137609681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_137610167_137610538_137610721_137611099
ES.24801.1	chr4	-	169	1	Intergenic	novelGene_20460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	137694503	137694334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137694300_137694500
ES.24802.1	chr4	+	6481	34	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	33	347	intron_retention	FALSE	canonical	1	1	junction_4	6.40907299947351	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAACAGTT	660	False	NA	NA	False	NA	NA	NA	137720365	137933812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.10	chr4	+	6963	33	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	83	-13	intron_retention	FALSE	canonical	1	1	junction_8	5.89814258368683	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTCCTTTTGACAGCC	710	False	NA	NA	False	AATAAA	-27	NA	137720415	137934377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.11	chr4	+	6065	35	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	93	345	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	6.41742869095249	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	720	False	NA	NA	False	NA	NA	NA	137720425	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.12	chr4	+	3463	11	NIC	ENSMUSG00000028760.17	novel	3252	13	NA	NA	111	1	intron_retention	FALSE	canonical	0	0	junction_10	4.29068759058499	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATGTGTATGAGCGTT	738	False	NA	NA	False	ATTAAA	-14	NA	137720443	137854746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137854043
ES.24802.13	chr4	+	6382	33	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	115	-22	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.99601104381071	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAAGACTTCTCCTT	742	False	NA	NA	False	AATAAA	-18	NA	137720447	137934368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.14	chr4	+	6261	33	NIC	ENSMUSG00000028760.17	novel	6235	36	NA	NA	161	345	intron_retention	FALSE	canonical	1	1	junction_8	5.91310779117039	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	788	False	NA	NA	False	NA	NA	NA	137720493	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.15	chr4	+	6161	33	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	-119	345	intron_retention	FALSE	canonical	1	1	junction_8	5.89814258368683	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	942	False	NA	NA	False	NA	NA	NA	137720647	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.16	chr4	+	5403	32	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	1	345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	6.49741804158205	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	1062	False	NA	NA	False	NA	NA	NA	137720767	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137832624_137832748_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.17	chr4	+	5796	35	NNC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	-10	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	6.74703574538337	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGAAAAAAAAAAC	1071	False	NA	NA	False	NA	NA	NA	137720776	137933808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137811567_137811682_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853117_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.18	chr4	+	5599	34	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	-6	282	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	6.53323775721399	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAATAAAAAAAA	1075	False	NA	NA	False	TTTAAA	-17	NA	137720780	137933747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137811567_137811682_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.19	chr4	+	2901	12	NNC	ENSMUSG00000028760.17	novel	3252	13	NA	NA	-6	2	intron_retention	TRUE	canonical	0	0	junction_11	4.49977042573258	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGTGTATGAGCGTTT	1075	False	NA	NA	False	ATTAAA	-15	NA	137720780	137854747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853123
ES.24802.2	chr4	+	5969	34	NIC	ENSMUSG00000028760.17	novel	6235	36	NA	NA	33	282	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	5.95622229454531	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAATAAAAAAAA	660	False	NA	NA	False	TTTAAA	-17	NA	137720365	137933747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.20	chr4	+	5317	34	FSM	ENSMUSG00000028760.17	ENSMUST00000203828.3	5289	34	3	-31	3	31	multi-exon	FALSE	canonical	1	1	junction_9	5.94294884337772	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTAAGTATTTTTTTAA	1121	False	NA	NA	False	AATACA	-19	NA	137720826	137933496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.21	chr4	+	5442	33	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	6	345	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.99601104381071	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	1124	False	NA	NA	False	NA	NA	NA	137720829	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.22	chr4	+	5690	33	ISM	ENSMUSG00000028760.17	ENSMUST00000203828.3	5289	34	189	-236	189	236	3prime_fragment	FALSE	canonical	1	1	junction_8	5.89814258368683	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTTTTAATCTTT	1307	False	NA	NA	False	AATACA	-19	NA	137721012	137933701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.23	chr4	+	5619	32	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	236	344	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	5.92881813646846	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAGAAAAAAAAAACA	1354	False	NA	NA	False	NA	NA	NA	137721059	137933809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.24	chr4	+	5504	33	NNC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	597	-446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.13256866553486	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCACCGCACATTTGTG	1715	False	NA	NA	False	AATAAA	-15	NA	137721420	137933944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137721456_137772653_137772730_137785259_137785389_137810224_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.26	chr4	+	4875	29	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	53266	345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	6.34991563498513	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	137785328	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.27	chr4	+	5633	31	NNC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	53295	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.04060335470629	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATAAAAAAGGAATT	NA	False	NA	NA	False	AATACA	-15	NA	137785357	137934282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137785389_137810224_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.28	chr4	+	159	1	Intergenic	novelGene_20469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	137787610	137787769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137787600_137787800
ES.24802.29	chr4	+	4454	26	NNC	ENSMUSG00000028760.17	novel	5363	22	NA	NA	-31673	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.82326368971902	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTCTGTTTTAAT	NA	False	NA	NA	False	AATACA	-15	NA	137847324	137933697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137847413_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.3	chr4	+	6273	32	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	34	359	intron_retention	FALSE	canonical	1	1	junction_2	5.94529343664943	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTGAACTTTAATTT	661	False	NA	NA	False	NA	NA	NA	137720366	137933824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.30	chr4	+	4517	25	ISM	ENSMUSG00000028760.17	ENSMUST00000203828.3	5289	34	126541	-31	-31633	31	3prime_fragment	FALSE	canonical	2	7	junction_1	5.06194269909181	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTAAGTATTTTTTTAA	NA	False	NA	NA	False	AATACA	-19	NA	137847364	137933496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.31	chr4	+	174	2	Intergenic	novelGene_20471	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	137855508	137910041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_137855634_137909992
ES.24802.32	chr4	+	3351	22	NNC	ENSMUSG00000028760.17	novel	5363	22	NA	NA	-107	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	5.72894943929553	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTCTGTTTTAAT	NA	False	NA	NA	False	AATACA	-15	NA	137878890	137933697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925386_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.33	chr4	+	1970	13	ISM	ENSMUSG00000028760.17	ENSMUST00000140796.2	5363	22	25248	2009	-982	345	3prime_fragment	FALSE	canonical	3	10	junction_2	5.08469927003227	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	984	False	NA	NA	False	NA	NA	NA	137904245	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.4	chr4	+	5756	33	NNC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	49	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.06217782649107	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTCTGTTTTAAT	676	False	NA	NA	False	AATACA	-15	NA	137720381	137933697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810224_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.5	chr4	+	5912	33	NNC	ENSMUSG00000028760.17	novel	6235	36	NA	NA	51	345	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.43104955955869	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAAAACAG	678	False	NA	NA	False	NA	NA	NA	137720383	137933810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915534_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.6	chr4	+	3152	12	NIC	ENSMUSG00000028760.17	novel	3252	13	NA	NA	71	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	4.09595648220684	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATGTGTATGAGCGTT	698	False	NA	NA	False	ATTAAA	-14	NA	137720403	137854746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137854043
ES.24802.7	chr4	+	5812	33	NIC	ENSMUSG00000028760.17	novel	8134	34	NA	NA	77	238	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.98141653373179	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTTTAATCTTTTC	704	False	NA	NA	False	AATACA	-21	NA	137720409	137933703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137720939_137721292_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.8	chr4	+	6107	32	NIC	ENSMUSG00000028760.17	novel	6139	35	NA	NA	79	238	intron_retention	FALSE	canonical	1	1	junction_2	5.94529343664943	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTTTAATCTTTTC	706	False	NA	NA	False	AATACA	-21	NA	137720411	137933703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137721456_137772653_137772730_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907857_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24802.9	chr4	+	5933	34	FSM	ENSMUSG00000028760.17	ENSMUST00000203828.3	5289	34	-408	-236	83	236	multi-exon	FALSE	canonical	1	1	junction_9	5.94294884337772	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTTTTAATCTTT	710	False	NA	NA	False	AATACA	-19	NA	137720415	137933701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ES.24803.1	chr4	-	333	1	Intergenic	novelGene_20461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAACCTACTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	137725005	137724672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137724700_137725000
ES.24804.1	chr4	-	160	1	Intergenic	novelGene_20462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	137728752	137728592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137728600_137728800
ES.24805.1	chr4	-	171	1	Intergenic	novelGene_20463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTCTG	6447	False	NA	NA	False	NA	NA	NA	137735982	137735811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137735800_137736000
ES.24806.1	chr4	-	170	1	Intergenic	novelGene_20464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	2267	False	NA	NA	False	NA	NA	NA	137740162	137739992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137740000_137740200
ES.24807.1	chr4	-	625	1	Intergenic	novelGene_20465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACAGCTTGTCAA	920	False	NA	NA	False	NA	NA	NA	137741509	137740884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137740900_137741500
ES.24807.2	chr4	-	316	1	Intergenic	novelGene_20466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTGCACCTATCATCT	920	False	NA	NA	False	NA	NA	NA	137741509	137741193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137741200_137741500
ES.24807.3	chr4	-	212	1	Intergenic	novelGene_20467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATCCTTGCACTC	920	False	NA	NA	False	NA	NA	NA	137741509	137741297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137741300_137741500
ES.24807.4	chr4	-	180	2	Antisense	novelGene_ENSMUSG00000028760.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3837	False	NA	NA	False	NA	NA	NA	137781835	137741327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_137741460_137781787
ES.24807.5	chr4	-	4030	1	Intergenic	novelGene_20468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGGAAGAAAGAAAAAAAAA	8545	False	NA	NA	False	NA	NA	NA	137777127	137773097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137773100_137777100
ES.24808.1	chr4	-	3128	1	Intergenic	novelGene_20470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAAATTTTTGTCAA	559	False	NA	NA	False	AAAAAG	-7	NA	137795796	137792668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137792700_137795800
ES.24809.1	chr4	-	1920	1	Intergenic	novelGene_20472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAACTATCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	137888794	137886874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137886900_137888800
ES.2481.1	chr10	+	178	1	Intergenic	novelGene_1882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCATACAG	2109	False	NA	NA	False	NA	NA	NA	24642868	24643046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_24642900_24643000
ES.24810.1	chr4	+	3509	13	NNC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	32.7350474771816	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGCTTAGTGAAAAG	4527	False	NA	25	True	AATAAA	-23	NA	137943899	137970464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968226_137968756
ES.24810.10	chr4	+	6080	12	NIC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	0	2	intron_retention	FALSE	canonical	3	12	junction_3	31.8412903098326	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCAGTACCTGTCCTGC	4573	False	NA	44	True	AATAAA	-42	NA	137943945	137970483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.11	chr4	+	3230	13	NIC	ENSMUSG00000028759.14	novel	5155	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	41.5979433252281	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAACTACAGCTTAGTG	4584	False	NA	20	True	AATAAA	-18	NA	137943956	137970459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944052_137948836_137949030_137949399_137949500_137950839_137950961_137953199_137953364_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.13	chr4	+	8286	11	NNC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	136	-6	intron_retention	FALSE	canonical	0	0	junction_5	31.528558482747	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGCTGAACTACAGC	4709	False	NA	14	True	AATAAA	-12	NA	137944081	137970453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957677_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.14	chr4	+	3367	13	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	-56	7	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	33.1821571865898	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGCTTAGTGAAAAGTT	5009	False	NA	27	True	AATAAA	-25	NA	137944381	137970466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944606_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.15	chr4	+	3155	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.9615581863273	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAGTGAAAAGTTTCCA	5066	False	NA	31	True	AATAAA	-29	NA	137944438	137970470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.16	chr4	+	3136	12	NNC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.4902742208833	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTACAGCTTAGTGAA	5104	False	NA	22	True	AATAAA	-20	NA	137944476	137970461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968728
ES.24810.17	chr4	+	3035	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	65	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	34.8035810829625	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTGAACTACAGCTTAG	5134	False	NA	18	True	AATAAA	-16	NA	137944506	137970457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944606_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.19	chr4	+	3207	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	132	22	-5	0	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAACTACAGCTTAGTG	5201	False	NA	20	True	AATAAA	-18	NA	137944573	137970459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.2	chr4	+	3156	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	-33	-10	-6	10	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTCCTGCAATCTCTC	4532	False	NA	52	True	TTTAAA	-36	NA	137943904	137970491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.20	chr4	+	3567	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	21	junction_1	24.8961479313203	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACTACAGCTTAGTGA	5207	False	NA	21	True	AATAAA	-19	NA	137944579	137970460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944606_137948836_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.21	chr4	+	4643	14	NNC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5220645146797	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGCTGAACTACAGC	5224	False	NA	14	True	AATAAA	-12	NA	137944596	137970453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137945948_137946712_137946836_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.22	chr4	+	3849	5	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	15446	22	2920	0	3prime_fragment	FALSE	canonical	3	85	junction_4	12.6589889011722	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAACTACAGCTTAGTG	NA	False	NA	20	True	AATAAA	-18	NA	137959887	137970459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.3	chr4	+	5884	12	NIC	ENSMUSG00000028759.14	novel	5155	13	NA	NA	0	-10	intron_retention	FALSE	canonical	3	12	junction_3	31.6115367579361	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGTGAAAAGTTTCCAG	4538	False	NA	32	True	AATAAA	-30	NA	137943910	137970471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.4	chr4	+	2957	11	NIC	ENSMUSG00000028759.14	novel	3113	12	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	34.6994236263371	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAACTACAGCTTAGT	4546	False	NA	19	True	AATAAA	-17	NA	137943918	137970458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.5	chr4	+	3323	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	-17	5	10	-5	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGTTTCCAGTACCT	4548	False	NA	37	True	AATAAA	-35	NA	137943920	137970476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.6	chr4	+	5916	11	NIC	ENSMUSG00000028759.14	novel	3113	12	NA	NA	-5	5	intron_retention	FALSE	canonical	3	37	junction_1	21.9034243898072	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGCTTAGTGAAAAG	4559	False	NA	25	True	AATAAA	-23	NA	137943931	137970464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137964619_137966847_137966960_137967931_137968049_137968756
ES.24810.7	chr4	+	3274	13	NNC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	32.3131380229295	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCTTAGTGAAAAGTTT	4559	False	NA	28	True	AATAAA	-26	NA	137943931	137970467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967960_137968049_137968756
ES.24810.9	chr4	+	3230	13	NNC	ENSMUSG00000028759.14	novel	3311	13	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.6935744597876	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGCTGAACTACAGC	4572	False	NA	14	True	AATAAA	-12	NA	137943944	137970453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137944052_137948836_137949035_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956997_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ES.24811.1	chr4	-	173	1	Intergenic	novelGene_20473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	137958200	137958027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_137958000_137958200
ES.24812.1	chr4	+	3135	9	NIC	ENSMUSG00000045349.16	novel	3512	10	NA	NA	-61	-363	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.3418742493994	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGTTTTCCTGTTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	137977652	137988280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137977820_137981141_137981270_137981583_137981665_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
ES.24812.2	chr4	+	2383	11	FSM	ENSMUSG00000045349.16	ENSMUST00000105823.2	3529	11	-46	1192	-5	1029	multi-exon	FALSE	canonical	1	1	junction_1	2.68328157299975	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	137977728	137987451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137977820_137980922_137981001_137981141_137981270_137981583_137981665_137982008_137982084_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
ES.24812.3	chr4	+	3197	11	FSM	ENSMUSG00000045349.16	ENSMUST00000105823.2	3529	11	-33	365	8	-365	multi-exon	FALSE	canonical	1	1	junction_1	2.68328157299975	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTCGTTTTCCTGTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	137977741	137988278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_137977820_137980922_137981001_137981141_137981270_137981583_137981665_137982008_137982084_137982862_137983010_137984023_137984276_137984425_137984601_137984915_137985025_137985479_137985640_137986364
ES.24812.4	chr4	+	5651	7	NIC	ENSMUSG00000045349.16	novel	3529	11	NA	NA	1217	-369	intron_retention	FALSE	canonical	1	2	junction_5	2.5603819159562	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAAGTCGTTTTCCTG	NA	False	NA	NA	False	AATAAA	-18	NA	137978991	137988274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_137981665_137982008_137982084_137982862_137983010_137984023_137984601_137984915_137985025_137985479_137985640_137986364
ES.24813.1	chr4	+	3415	15	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.49182336321606	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCGCCCTTTCCCAAC	NA	False	NA	NA	False	AATAAA	-12	NA	137989782	138029278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005382_138005560_138008667_138008778_138013742_138013897_138015239_138015797_138016551_138016636_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025516_138025638_138028559
ES.24813.2	chr4	+	3681	15	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.42015347801392	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCGCCCTTTCCCAAC	NA	False	NA	NA	False	AATAAA	-12	NA	137989795	138029278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015797_138016548_138016636_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025516_138025638_138028559
ES.24813.3	chr4	+	3030	13	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.46503324295817	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTTTCCCAACCCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	137989800	138029284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138016551_138016701_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025516_138025638_138028559
ES.24813.4	chr4	+	1454	4	NNC	ENSMUSG00000028758.13	novel	1968	7	NA	NA	-4	-11292	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.2659863237109	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAGAGAGAGAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	137989805	138003181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990107_137996255_137996403_137997156_137997259_138002277
ES.24813.5	chr4	+	2807	13	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.6718699236469	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCGCCCTTTCCCAAC	NA	False	NA	NA	False	AATAAA	-12	NA	137989806	138029278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990107_137996255_137996403_137997156_137997259_138002277_138002468_138005382_138005560_138008667_138008778_138016548_138016701_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025516_138025638_138028559
ES.24813.6	chr4	+	3463	15	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.63027894850314	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCCTTTCCCAACCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	137989806	138029282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005382_138005560_138008667_138008778_138013742_138013897_138015239_138015797_138016548_138016701_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025516_138025638_138028559
ES.24813.8	chr4	+	3251	8	NNC	ENSMUSG00000028758.13	novel	3453	15	NA	NA	24369	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.8070158058105	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTTTCCCAACCCTCTG	161	False	NA	NA	False	AATAAA	-18	NA	138014178	138029284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138015797_138016548_138016636_138018679_138018818_138019424_138019657_138021022_138021282_138023502_138023574_138025516_138025638_138028559
ES.24814.1	chr4	+	1800	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	-32	352	-32	-352	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGCCAGAGCCTCCG	NA	False	NA	82	True	NA	NA	NA	138032008	138039587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.10	chr4	+	1607	11	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	97	-403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	702.39804242324	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCACCTGGCCCCATG	NA	False	NA	31	True	AATAAA	-17	NA	138032137	138039536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038963_138039058_138039144
ES.24814.11	chr4	+	1469	10	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	99	-396	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	735.676257300421	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCCCATGACACTGA	NA	False	NA	38	True	AATAAA	-24	NA	138032139	138039543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038728_138038842_138038950_138039058_138039144
ES.24814.13	chr4	+	1693	10	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	117	397	117	-397	intron_retention	FALSE	canonical	3	2240	junction_8	71.4002801114954	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGCCCCATGACACTG	NA	False	NA	37	True	AATAAA	-23	NA	138032157	138039542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950
ES.24814.14	chr4	+	1600	11	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	118	-396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	693.687400779342	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCCCATGACACTGA	NA	False	NA	38	True	AATAAA	-24	NA	138032158	138039543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036906_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.16	chr4	+	1712	10	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	121	-396	intron_retention	FALSE	canonical	3	2240	junction_8	67.9544146405206	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCCCATGACACTGA	NA	False	NA	38	True	AATAAA	-24	NA	138032161	138039543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138039058_138039144
ES.24814.19	chr4	+	2098	9	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	129	-403	intron_retention	FALSE	canonical	3	2261	junction_7	68.9524292537979	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCACCTGGCCCCATG	NA	False	NA	31	True	AATAAA	-17	NA	138032169	138039536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038842_138038950_138039058_138039144
ES.24814.2	chr4	+	1766	11	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	-23	-398	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	699.108181900341	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGGCCCCATGACACT	NA	False	NA	36	True	AATAAA	-22	NA	138032017	138039541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038130_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.22	chr4	+	1777	12	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	131	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	671.341595009636	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGGTAGTCTGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	138032171	138039794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144_138039624_138039690
ES.24814.24	chr4	+	1396	10	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	132	-396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	735.674008589117	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCCCATGACACTGA	NA	False	NA	38	True	AATAAA	-24	NA	138032172	138039543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036960_138037979_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.25	chr4	+	1626	12	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	132	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	671.341595009636	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGGTCCTATCAGTGT	NA	False	NA	26	True	NA	NA	NA	138032172	138039928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144_138039522_138039872
ES.24814.28	chr4	+	1484	10	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	146	-403	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	735.730643813967	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCACCTGGCCCCATG	NA	False	NA	31	True	AATAAA	-17	NA	138032186	138039536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138032350_138032465_138032577_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.3	chr4	+	1712	11	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	-4	-405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	700.003971417306	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTCACCTGGCCCCA	NA	False	NA	29	True	AATAAA	-15	NA	138032036	138039534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038056_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.30	chr4	+	2066	10	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	147	-16	intron_retention	FALSE	canonical	3	2240	junction_8	67.9544146405206	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTAGGTCCTATC	NA	False	NA	21	True	NA	NA	NA	138032187	138039923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138039058_138039144
ES.24814.32	chr4	+	1796	10	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	424	16	424	-16	3prime_fragment	FALSE	canonical	3	2240	junction_7	64.8801363960144	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTAGGTCCTATC	NA	False	NA	21	True	NA	NA	NA	138032464	138039923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.33	chr4	+	1788	3	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	5303	-396	intron_retention	FALSE	canonical	3	2313	junction_2	6.5	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCCCCATGACACTGA	1451	False	NA	38	True	AATAAA	-24	NA	138037343	138039543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138037589_138037913_138039058_138039144
ES.24814.34	chr4	+	1400	2	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	6374	16	6374	-16	intron_retention	FALSE	canonical	3	2261	junction_1	0	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTAGGTCCTATC	2522	False	NA	21	True	NA	NA	NA	138038414	138039923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138038842_138038950
ES.24814.4	chr4	+	2119	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	1	0	1	0	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTGTTCTTTTAGTTC	NA	False	NA	37	True	NA	NA	NA	138032041	138039939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.8	chr4	+	2945	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	94	-919	94	919	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGGTTGGGAAAAATGA	NA	False	NA	NA	False	ATTAAA	-19	NA	138032134	138040858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ES.24814.9	chr4	+	1879	12	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	94	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	671.341595009636	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTCCTATCAGTGTTC	NA	False	NA	28	True	NA	NA	NA	138032134	138039930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144_138039739_138039876
ES.24815.1	chr4	-	4217	5	NIC	ENSMUSG00000028756.13	novel	2375	8	NA	NA	-30	6	intron_retention	FALSE	canonical	3	101	junction_4	11.8400802362146	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGGAGCCAAGTGTTC	NA	False	NA	0	True	ATTAAA	-25	NA	138053581	138040713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138041525_138042807_138045390_138047299_138047401_138048048_138048334_138053143
ES.24815.2	chr4	-	2341	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	34	0	-33	0	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTGTACACTGGAGC	NA	False	NA	-9	True	ATTAAA	-16	NA	138053584	138040722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ES.24815.4	chr4	-	2395	9	NNC	ENSMUSG00000028756.13	novel	2375	8	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_1	62.5658403204177	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTGTACACTGGAGC	NA	False	NA	-9	True	ATTAAA	-16	NA	138053604	138040722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138041523_138042807_138043045_138043314_138043443_138044215_138044252_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ES.24815.5	chr4	-	1861	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	30	484	30	23	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACGAAGGCTGAAGAAGG	NA	False	NA	NA	False	ACTAAA	-37	NA	138053588	138041206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ES.24815.6	chr4	-	877	3	ISM	ENSMUSG00000028756.13	ENSMUST00000105817.4	1711	9	-19	6006	-19	-6006	intron_retention	FALSE	canonical	3	101	junction_2	15.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGCTGCACAGTTATCG	NA	False	NA	NA	False	AATAAA	-16	NA	138053570	138047235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_138047401_138048048_138048334_138053143
ES.24816.1	chr4	+	157	1	Intergenic	novelGene_20474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	138071666	138071823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138071700_138071800
ES.24817.1	chr4	-	204	1	Intergenic	novelGene_20475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAGAAAAACCTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	138086144	138085940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138085900_138086100
ES.24818.1	chr4	-	167	1	Intergenic	novelGene_20476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGTGAGCAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	138087954	138087787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138087800_138088000
ES.24819.1	chr4	-	2358	1	FSM	ENSMUSG00000078235.4	ENSMUST00000105032.4	2437	1	70	9	70	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGTCACCCCTCCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	138123769	138121411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138121400_138123800
ES.2482.1	chr10	+	189	1	Intergenic	novelGene_1883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTATTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	24670124	24670313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_24670100_24670300
ES.24820.1	chr4	+	180	1	Intergenic	novelGene_20477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAACCATTATCTTCT	4103	False	NA	NA	False	NA	NA	NA	138130606	138130786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138130600_138130800
ES.24821.1	chr4	+	352	1	FSM	ENSMUSG00000083326.5	ENSMUST00000117723.2	215	1	-68	-69	-68	69	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCCACACCACCACCAC	5563	False	NA	NA	False	ATTAAA	-43	NA	138153030	138153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138153000_138153400
ES.24822.1	chr4	-	155	1	Intergenic	novelGene_20478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAATAAATTAT	NA	False	NA	NA	False	NA	NA	NA	138158442	138158287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138158300_138158400
ES.24823.1	chr4	+	1391	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	-11	2353	-11	901	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTCTCCGACTCTTGCT	NA	False	NA	23	True	NA	NA	NA	138161970	138167223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ES.24823.10	chr4	+	1956	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	42	1735	-10	1519	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCACTTTTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	138162023	138167841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ES.24823.11	chr4	+	3639	2	ISM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	3347	21	3295	-18	3prime_fragment	FALSE	canonical	3	201	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTTTCTTTCATGAG	NA	False	NA	3	True	NA	NA	NA	138165328	138169555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138165674_138166261
ES.24823.12	chr4	+	1944	1	ISM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	4352	1299	4300	-1296	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGATATTGTCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	138166333	138168277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138166300_138168300
ES.24823.2	chr4	+	3664	5	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	1	-18	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	87.7638877899105	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTTTCTTTCATGAG	NA	False	NA	3	True	NA	NA	NA	138161988	138169555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261_138169100_138169140
ES.24823.3	chr4	+	4441	5	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	7	761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.7638877899105	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGACGGTTGCCACC	NA	False	NA	NA	False	ATTAAA	-12	NA	138161994	138170337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261_138169095_138169134
ES.24823.4	chr4	+	4481	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	14	-762	8	762	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGACGGTTGCCACCT	NA	False	NA	NA	False	ATTAAA	-13	NA	138161995	138170338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ES.24823.5	chr4	+	3691	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	22	20	16	-17	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTTTCTTTCATGAGT	NA	False	NA	4	True	NA	NA	NA	138162003	138169556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ES.24823.6	chr4	+	3907	5	NIC	ENSMUSG00000041241.13	novel	3944	5	NA	NA	17	-20	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	95.7584852637091	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGGGTTTCTTTCATG	NA	False	NA	1	True	NA	NA	NA	138162004	138169553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138162191_138163490_138163711_138164938_138165027_138165552_138165674_138166261
ES.24823.7	chr4	+	6955	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	25	-3247	19	3247	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCATTACCTTTCATG	NA	False	NA	NA	False	NA	NA	NA	138162006	138172823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ES.24823.8	chr4	+	4430	5	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	20	764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.7638877899105	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACGGTTGCCACCTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	138162007	138170340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261_138169100_138169140
ES.24823.9	chr4	+	3559	4	NNC	ENSMUSG00000041241.13	novel	3733	4	NA	NA	20	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.2689306080631	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTTTCTTTCATGAGT	NA	False	NA	4	True	NA	NA	NA	138162007	138169556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138162191_138165552_138165674_138166261_138169095_138169134
ES.24824.1	chr4	+	1804	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	-329	2969	-329	-2969	multi-exon	FALSE	canonical	3	239	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTTGCAGCTATTTG	5415	False	NA	NA	False	TATAAA	-9	NA	138181295	138184465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138182663_138184028
ES.24824.2	chr4	+	2550	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	-86	1980	-86	-1980	multi-exon	FALSE	canonical	3	239	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTCGTTAGCCTTGTT	5658	False	NA	18	True	AATAAA	-18	NA	138181538	138185454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138182663_138184028
ES.24824.3	chr4	+	4499	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	-55	0	-55	0	multi-exon	FALSE	canonical	3	239	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTATTGGGTGAGCAT	5689	False	NA	NA	False	AATAAA	-14	NA	138181569	138187434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138182663_138184028
ES.24824.4	chr4	+	4403	3	NNC	ENSMUSG00000046447.4	novel	4444	2	NA	NA	-55	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	118	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATTGGGTGAGCATT	5689	False	NA	NA	False	AATAAA	-15	NA	138181569	138187435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138182663_138184028_138186348_138186444
ES.24824.5	chr4	+	1248	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	71	3125	71	-3125	multi-exon	FALSE	canonical	3	239	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGGTGGTGGAGGTGGT	5815	False	NA	NA	False	NA	NA	NA	138181695	138184309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138182663_138184028
ES.24824.6	chr4	+	1262	1	NIC	ENSMUSG00000046447.4	novel	4444	2	NA	NA	1488	-3060	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAGTTAAAAAAA	7232	False	NA	NA	False	NA	NA	NA	138183112	138184374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138183100_138184400
ES.24825.1	chr4	-	1146	1	Antisense	novelGene_ENSMUSG00000046447.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGGGAGGGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	138185151	138184005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_138184000_138185200
ES.24826.1	chr4	-	163	1	Intergenic	novelGene_20479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTCAGGAAGAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	138214363	138214200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138214200_138214400
ES.24827.1	chr4	+	680	3	Intergenic	novelGene_20480	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTCTGAGACTCTAAT	4287	False	NA	12	True	NA	NA	NA	138225888	138255992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138226002_138226562_138226737_138255599
ES.24828.1	chr4	+	958	2	Intergenic	novelGene_20481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGTGTAGTAGTAAAT	8817	False	NA	NA	False	NA	NA	NA	138259290	138260538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138259476_138259765
ES.24829.1	chr4	+	1287	1	Intergenic	novelGene_20482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138276275	138277562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138276300_138277600
ES.2483.1	chr10	-	4195	15	NIC	ENSMUSG00000019989.9	novel	4253	25	NA	NA	-8270	410	intron_retention	FALSE	canonical	1	2	junction_4	3.28881840949181	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGACATGAATCTCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	24681939	24648978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766
ES.2483.2	chr10	-	2683	16	ISM	ENSMUSG00000019989.9	ENSMUST00000020169.9	4253	25	30179	678	-8275	407	3prime_fragment	FALSE	canonical	1	2	junction_4	3.29983164553722	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCTTGACATGAATCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	24681944	24648981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766
ES.2483.3	chr10	-	2094	19	NNC	ENSMUSG00000019989.9	novel	4253	25	NA	NA	-10611	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	3.60897372642483	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTTTAGAGTCATACT	8172	False	NA	NA	False	AATAAA	-16	NA	24684280	24649713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766_24681833_24683343_24683454_24683975_24684096_24684255
ES.2483.5	chr10	-	4338	24	NIC	ENSMUSG00000019989.9	novel	4253	25	NA	NA	19	15	intron_retention	FALSE	canonical	1	1	junction_15	3.44275354692681	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTTTAGAGTCATACT	35	False	NA	NA	False	AATAAA	-16	NA	24712104	24649713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766_24681833_24683343_24683454_24683975_24684096_24685751_24685832_24693764_24693863_24696469_24696531_24700700_24700827_24702073_24702197_24707628_24707705_24711913
ES.2483.6	chr10	-	2051	17	NNC	ENSMUSG00000019989.9	novel	4253	25	NA	NA	-8270	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.96074487943871	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAACCTTTAGAGTCATA	NA	False	NA	NA	False	AATAAA	-14	NA	24681939	24649715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_24649971_24650680_24650838_24652658_24652792_24653787_24653870_24654590_24654724_24660295_24660399_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766
ES.2483.7	chr10	-	130	1	Intergenic	novelGene_1884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2059	False	NA	NA	False	NA	NA	NA	24690393	24690263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_24690300_24690400
ES.24830.1	chr4	-	186	1	Intergenic	novelGene_20483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAGGGTAGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	138277008	138276822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138276800_138277000
ES.24831.1	chr4	+	819	3	Intergenic	novelGene_20484	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	1910	False	NA	11	True	NA	NA	NA	138427648	138429266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138427767_138427865_138427991_138428690
ES.24832.1	chr4	-	4097	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	32	-1203	-12	1203	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTTGCCTTGTTCATGG	7381	False	NA	NA	False	NA	NA	NA	138452544	138444645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138448690_138452491
ES.24832.2	chr4	-	2887	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	44	-5	0	5	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGAAGGCGTCCAA	7393	False	NA	NA	False	AATAAA	-18	NA	138452532	138445843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138448690_138452491
ES.24832.3	chr4	-	3017	3	NIC	ENSMUSG00000043621.14	novel	2757	3	NA	NA	18	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGAAGGCGTCCAA	7411	False	NA	NA	False	AATAAA	-18	NA	138452514	138445843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138448690_138448810_138448959_138452491
ES.24832.4	chr4	-	1812	3	NIC	ENSMUSG00000043621.14	novel	2757	3	NA	NA	-13	-931	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCTACGCTTCTGCAC	7380	False	NA	NA	False	AGTAAA	-28	NA	138452545	138447079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138448690_138448810_138448959_138452491
ES.24833.1	chr4	-	2423	5	FSM	ENSMUSG00000028749.8	ENSMUST00000030526.7	2465	5	36	6	36	-6	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCACTGCTGGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	138484901	138477849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138479735_138480573_138480684_138481436_138481582_138484017_138484071_138484671
ES.24834.1	chr4	+	4009	2	Intergenic	novelGene_20486	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCTAGAGAGATGGCT	NA	False	NA	NA	False	AATAAA	-44	NA	138509800	138513856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138512875_138512921
ES.24835.1	chr4	+	3893	1	Intergenic	novelGene_20487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTCTCTAGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	138518773	138522666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138518800_138522700
ES.24836.1	chr4	+	179	1	Intergenic	novelGene_20488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	138548682	138548861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138548700_138548900
ES.24837.1	chr4	+	208	1	Intergenic	novelGene_20489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCGATAATAATAATAAATA	NA	False	NA	35	True	NA	NA	NA	138551716	138551924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138551700_138551900
ES.24838.1	chr4	+	176	1	Intergenic	novelGene_20490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGATTAA	NA	False	NA	NA	False	NA	NA	NA	138570549	138570725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138570500_138570700
ES.24839.1	chr4	+	2976	1	Intergenic	novelGene_20491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCCTGGTCAGTATCAAT	NA	False	NA	NA	False	NA	NA	NA	138581808	138584784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138581800_138584800
ES.2484.10	chr10	+	5138	28	NIC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	19	-9	intron_retention	FALSE	canonical	2	39	junction_6	9.75178925582307	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCTGATTGCCTGACTG	NA	False	NA	4	True	AATAAA	-11	NA	24745902	24789349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.12	chr10	+	4746	29	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	14.6908186654531	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24745913	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768491_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.13	chr10	+	4608	29	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	-18	-212	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.4478301456782	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGACGTTTCATACT	NA	False	NA	8	True	AATAAA	-21	NA	24745916	24789146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746039_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.15	chr10	+	5289	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-25	-466	-15	245	multi-exon	FALSE	canonical	2	39	junction_7	9.84419439392103	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTCTCCAGAAACTTTA	NA	False	NA	NA	False	AATAAA	-8	NA	24745919	24789824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.16	chr10	+	5063	28	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	-12	-204	intron_retention	FALSE	canonical	0	0	junction_12	14.7732750960805	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCATACTCTTGTCTT	NA	False	NA	16	True	AATAAA	-29	NA	24745922	24789154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768393_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.17	chr10	+	4828	30	FSM	ENSMUSG00000019984.17	ENSMUST00000092646.13	5098	30	39	231	-12	-10	multi-exon	FALSE	canonical	2	4	junction_10	16.8422067632588	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTCTGATTGCCTGACT	NA	False	NA	3	True	AATAAA	-10	NA	24745922	24789348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.19	chr10	+	5444	30	NNC	ENSMUSG00000019984.17	novel	5098	30	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	21.7756368241279	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCTGACTGCTTTGTAA	NA	False	NA	12	True	AATAAA	-19	NA	24745934	24789357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24772294_24772359_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781955_24783076_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.2	chr10	+	5221	28	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	4	-3	intron_retention	TRUE	canonical	1	1	junction_24	14.1927742971435	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24745887	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783968_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.20	chr10	+	4998	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	8	-208	8	-13	multi-exon	FALSE	canonical	2	39	junction_7	9.84419439392103	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACTATGATCTCCTA	NA	False	NA	NA	False	AATAAA	-13	NA	24745952	24789566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.21	chr10	+	5511	1	NIC	ENSMUSG00000019984.17	novel	5098	30	NA	NA	5724	-4405	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAATGGAAGTGGAAGACA	NA	False	NA	NA	False	AAAACA	-5	NA	24758567	24764078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24758600_24764100
ES.2484.22	chr10	+	5901	17	NIC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	-321	-3	intron_retention	FALSE	canonical	2	41	junction_15	9.74659395635214	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24764027	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.23	chr10	+	7209	15	NIC	ENSMUSG00000019984.17	novel	3226	18	NA	NA	-376	-3	intron_retention	FALSE	canonical	2	41	junction_13	9.54687682663064	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24766488	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.24	chr10	+	6053	13	NIC	ENSMUSG00000019984.17	novel	3226	18	NA	NA	2781	-7	intron_retention	FALSE	canonical	2	41	junction_11	9.90335240657874	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGATTGCCTGACTGCT	NA	False	NA	6	True	AATAAA	-13	NA	24769645	24789351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24769759_24771603_24771747_24773082_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.25	chr10	+	5745	9	NIC	ENSMUSG00000019984.17	novel	3226	18	NA	NA	7540	-3	intron_retention	FALSE	canonical	2	41	junction_7	11.2583302491977	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24774404	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24774472_24776593_24778372_24779558_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.26	chr10	+	4118	10	ISM	ENSMUSG00000019984.17	ENSMUST00000176285.2	3226	18	13907	-2312	11391	1651	3prime_fragment	FALSE	canonical	2	41	junction_8	10.2173901622868	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGGTGCATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	24778255	24791230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.27	chr10	+	3497	7	NIC	ENSMUSG00000019984.17	novel	3226	18	NA	NA	12894	-206	intron_retention	FALSE	canonical	2	41	junction_5	12.2020034784821	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTTTCATACTCTTGTC	NA	False	NA	14	True	AATAAA	-27	NA	24779758	24789152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.28	chr10	+	5330	1	Genic_Genomic	ENSMUSG00000019984.17	novel	NA	NA	NA	NA	20412	3027	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTCTTAACAGATTTGA	NA	False	NA	NA	False	NA	NA	NA	24787276	24792606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_24787300_24792600
ES.2484.3	chr10	+	3957	22	NIC	ENSMUSG00000019984.17	novel	3953	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	14.0743087858855	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCAGACTTACTCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	24745891	24782663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719
ES.2484.4	chr10	+	4846	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-43	-5	18	5	multi-exon	FALSE	canonical	2	39	junction_7	9.84419439392103	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTTTGTAACTGAAT	NA	False	NA	18	True	AATAAA	-25	NA	24745901	24789363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.5	chr10	+	4651	29	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	18	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	17.6014551810297	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGTTTCATACTCTTGTC	NA	False	NA	14	True	AATAAA	-27	NA	24745901	24789152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768393_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784532_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.6	chr10	+	4646	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	-42	194	19	-194	multi-exon	FALSE	canonical	2	39	junction_7	9.84419439392103	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTCTTTGGTTTTTTT	NA	False	NA	26	True	AATAAA	-39	NA	24745902	24789164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.7	chr10	+	4734	28	NIC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	19	-10	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	14.8286046931859	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTCTGATTGCCTGACT	NA	False	NA	3	True	AATAAA	-10	NA	24745902	24789348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.8	chr10	+	5270	28	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	19	-3	intron_retention	FALSE	canonical	0	0	junction_2	14.7857121556798	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	False	NA	10	True	AATAAA	-17	NA	24745902	24789355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746351_24746388_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.2484.9	chr10	+	4822	29	NNC	ENSMUSG00000019984.17	novel	4798	29	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0417245996776	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGATTGCCTGACTGC	NA	False	NA	5	True	AATAAA	-12	NA	24745902	24789350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_24746045_24746358_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773255_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ES.24840.1	chr4	-	279	2	Intergenic	novelGene_20485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	138500563	138488551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138488767_138500499
ES.24840.2	chr4	-	631	3	NNC	ENSMUSG00000041193.16	novel	1976	5	NA	NA	0	38003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	138590780	138488551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138488767_138546310_138546427_138590480
ES.24840.4	chr4	-	1715	5	NNC	ENSMUSG00000041193.16	novel	2131	6	NA	NA	-159	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.5169084012467	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAATTCACATGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	138546727	138526565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138527973_138528662_138528770_138533495_138533546_138546310_138546427_138546692
ES.24840.5	chr4	-	1713	4	NNC	ENSMUSG00000041193.16	novel	1976	5	NA	NA	193	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.7453700787218	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAATTCACATGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	138546346	138526565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138527973_138528662_138528770_138531817_138531981_138546310
ES.24840.6	chr4	-	2147	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	-22	6	-9	-6	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAATTCACATGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	138590802	138526565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
ES.24840.8	chr4	-	2839	5	NIC	ENSMUSG00000041193.16	novel	2131	6	NA	NA	-15	-10	intron_retention	FALSE	canonical	3	70	junction_1	9.48683298050514	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACCCTGAATTCACATG	NA	False	NA	-15	True	AATAAA	-14	NA	138590808	138526569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
ES.24840.9	chr4	-	675	3	ISM	ENSMUSG00000041193.16	ENSMUST00000102511.2	690	5	7623	-223	5281	223	3prime_fragment	FALSE	canonical	3	70	junction_2	7	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAACACCACCCCAGC	NA	False	NA	NA	False	AATAAA	-16	NA	138531853	138527440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_138527973_138528662_138528770_138531817
ES.24841.1	chr4	+	821	4	FSM	ENSMUSG00000028751.14	ENSMUST00000105804.2	786	4	-37	2	-37	-2	multi-exon	FALSE	canonical	3	8	junction_1	6.79869268479038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTTCCATTATTTCT	NA	False	NA	NA	False	NA	NA	NA	138606633	138610126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138606808_138607661_138607801_138607980_138608088_138609725
ES.24841.2	chr4	+	835	4	NNC	ENSMUSG00000028751.14	novel	786	4	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4986771653491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTCTTCCATTATTTC	NA	False	NA	NA	False	NA	NA	NA	138606633	138610125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138606808_138607646_138607801_138607980_138608088_138609725
ES.24842.1	chr4	-	6006	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	-22	-4316	-22	4316	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGGTCAGCTTGTTGAC	NA	False	NA	-4	True	AATAAA	-19	NA	138641278	138618373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
ES.24842.2	chr4	-	2332	7	NNC	ENSMUSG00000041161.9	novel	1668	8	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_6	9.65516557197349	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTTTCTCTCTCATT	NA	False	NA	0	True	NA	NA	NA	138641275	138622689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138623226_138624026_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640934
ES.24842.3	chr4	-	1476	7	NNC	ENSMUSG00000041161.9	novel	1668	8	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.6428327977153	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTTTCTCTCTCAT	NA	False	NA	-1	True	NA	NA	NA	138641240	138622690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138636792_138636942_138640982
ES.24843.1	chr4	+	166	1	Intergenic	novelGene_20492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	138688646	138688812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138688600_138688800
ES.24844.1	chr4	+	3952	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	-630	-4	-613	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTCTTCTTTTCACCT	NA	False	NA	28	True	AATAAA	-19	NA	138699585	138786482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.10	chr4	+	987	2	NNC	ENSMUSG00000041143.17	novel	1992	13	NA	NA	281	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTAAGGGTTCTTCTT	NA	False	NA	21	True	AATAAA	-12	NA	138700500	138786475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700545_138785532
ES.24844.11	chr4	+	3029	16	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	286	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.8837378597447	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTTCTTTTCACCTTC	NA	False	NA	30	True	AATAAA	-21	NA	138700505	138786484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723898_138737770_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.12	chr4	+	2899	16	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	297	-3	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	19.2879928107273	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTAAGGGTTCTTCTT	NA	False	NA	21	True	AATAAA	-12	NA	138700516	138786475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138700599_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.13	chr4	+	1918	15	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	319	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23.7327810835389	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACAGGCCTGAGCCTC	NA	False	NA	12	True	NA	NA	NA	138700538	138763945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700599_138704518_138704634_138710973_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138763688
ES.24844.14	chr4	+	3232	18	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	331	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.8819182805998	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTAAGGGTTCTTCTT	NA	False	NA	21	True	AATAAA	-12	NA	138700550	138786475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138719098_138719351_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.16	chr4	+	177	1	Intergenic	novelGene_20493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	138702062	138702239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138702100_138702200
ES.24844.17	chr4	+	4000	16	NNC	ENSMUSG00000041143.17	novel	660	5	NA	NA	8354	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2879928107273	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAAGGGTTCTTCTTTT	1685	False	NA	23	True	AATAAA	-14	NA	138708573	138786477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138709755_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.18	chr4	+	2401	11	NNC	ENSMUSG00000041143.17	novel	2922	16	NA	NA	35946	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.7747667386518	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAAGGGTTCTTCTTTT	NA	False	NA	23	True	AATAAA	-14	NA	138736165	138786477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138736394_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.19	chr4	+	3094	9	ISM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	45614	1	45610	-1	3prime_fragment	FALSE	canonical	3	62	junction_5	8.80252094572913	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAAGGGTTCTTCTTTT	NA	False	NA	23	True	AATAAA	-14	NA	138745829	138786477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.2	chr4	+	2957	16	NNC	ENSMUSG00000041143.17	novel	660	5	NA	NA	-577	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.2879928107273	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTAAGGGTTCTTCTT	NA	False	NA	21	True	AATAAA	-12	NA	138699621	138786475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138699762_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.20	chr4	+	169	1	Intergenic	novelGene_20495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1508	False	NA	NA	False	NA	NA	NA	138777313	138777482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138777300_138777500
ES.24844.4	chr4	+	3459	18	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.1439006740071	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138700173	138786478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717560_138717660_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.5	chr4	+	1289	7	ISM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	-38	61009	-21	7438	5prime_fragment	FALSE	canonical	3	56	junction_1	8.09835374217089	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTTGTTTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	138700177	138725469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334
ES.24844.6	chr4	+	3049	17	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.3561048337465	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTAAGGGTTCTTCTT	NA	False	NA	21	True	AATAAA	-12	NA	138700183	138786475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.7	chr4	+	3307	17	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18.4204370197886	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTTCTTCTTTTCACC	NA	False	NA	27	True	AATAAA	-18	NA	138700187	138786481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700599_138704518_138704634_138710973_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.8	chr4	+	3117	18	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.7048457948616	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAAGGGTTCTTCTTTT	NA	False	NA	23	True	AATAAA	-14	NA	138700216	138786477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717560_138717660_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ES.24844.9	chr4	+	6653	16	NNC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	1	4435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.1083967616271	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAACTATTCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	138700216	138768380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138719098_138719333_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138763688
ES.24845.1	chr4	-	3778	1	Intergenic	novelGene_20494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCCCTTTCTAGAATAC	NA	False	NA	NA	False	AATAAA	-45	NA	138737518	138733740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138733700_138737500
ES.24846.1	chr4	-	3192	5	NNC	ENSMUSG00000028747.11	novel	2341	4	NA	NA	106	1401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.73205080756888	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGATGTGTGGTGGACT	7063	False	NA	NA	False	AATAAA	-14	NA	138802775	138787017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138787871_138788314_138789175_138789384_138789544_138801352_138802641_138802743
ES.24846.2	chr4	-	1518	2	ISM	ENSMUSG00000028747.11	ENSMUST00000105802.8	2341	4	-30	12872	-30	-12571	5prime_fragment	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACTGGGTGACTGCCT	6927	False	NA	NA	False	AATAAA	-12	NA	138802911	138801290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_138802641_138802743
ES.24847.1	chr4	+	176	1	Intergenic	novelGene_20497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATATATGAT	NA	False	NA	NA	False	NA	NA	NA	138860710	138860886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138860700_138860900
ES.24848.1	chr4	-	2413	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	118	18	-1	-18	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGGAGTCCATGGAGC	5297	False	NA	NA	False	AATAAA	-20	NA	138858306	138829142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ES.24848.10	chr4	-	174	1	Intergenic	novelGene_20498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	138865877	138865703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138865700_138865900
ES.24848.2	chr4	-	1576	10	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	-34053	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1261.68691700565	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATGCCTTTATTCCTT	NA	False	NA	-13	True	AATAAA	-23	NA	138892477	138831094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232_138858508_138861814_138861899_138868156_138868253_138876288_138876438_138877947_138878054_138881255_138881401_138892143
ES.24848.3	chr4	-	338	2	NIC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	-36	7	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATGCCTTTATTCCTT	5262	False	NA	-13	True	AATAAA	-23	NA	138858341	138831094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138831324_138858232
ES.24848.4	chr4	-	436	3	NIC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	-24	7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	1286.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATGCCTTTATTCCTT	5274	False	NA	-13	True	AATAAA	-23	NA	138858329	138831094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_138831324_138832300_138832411_138858232
ES.24848.7	chr4	-	503	4	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	-54	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1282.69403990196	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGCAATGCCTTTAT	5244	False	NA	-18	True	AATAAA	-18	NA	138858359	138831099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138831318_138832300_138832411_138833166_138833215_138858232
ES.24848.8	chr4	-	499	4	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_3	1222.86257972386	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCAAGCAATGCCTTT	5473	False	NA	-20	True	AATAAA	-16	NA	138858130	138831101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_138831324_138832300_138832411_138833166_138833215_138858011
ES.24848.9	chr4	-	175	1	Intergenic	novelGene_20496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAATTCCCTGTAA	3176	False	NA	NA	False	NA	NA	NA	138860427	138860252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138860300_138860400
ES.24849.1	chr4	+	1523	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	-121	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	550.173836164534	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	-53	True	NA	NA	NA	138920088	139019068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138920129_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.24849.10	chr4	+	1593	6	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	14	10257	-1	1414	5prime_fragment	FALSE	canonical	3	1402	junction_1	117.937949787166	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTTGGGTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	138920248	139008812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778
ES.24849.12	chr4	+	5402	7	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	17	1	2	-1	intron_retention	FALSE	canonical	3	1402	junction_1	114.200724846892	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	-53	True	NA	NA	NA	138920251	139019068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339
ES.24849.13	chr4	+	3214	9	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	22	495	7	-177	intron_retention	FALSE	canonical	1	1	junction_8	540.124855357537	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGGCTCCAAGGCCT	NA	False	NA	15	True	AATAAA	-15	NA	138920256	139018574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171
ES.24849.14	chr4	+	4889	7	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	39	492	-6	-174	intron_retention	FALSE	canonical	3	1402	junction_1	114.200724846892	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCAAGGCCTGCT	NA	False	NA	18	True	AATAAA	-18	NA	138920273	139018577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339
ES.24849.15	chr4	+	7664	8	NIC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	7	1	intron_retention	FALSE	canonical	3	1402	junction_1	115.723103720449	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGTGTGTGAGAGAAG	NA	False	NA	11	True	AAAACA	-16	NA	138920286	139018752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139014406_139015066_139015144_139018313
ES.24849.16	chr4	+	1653	9	NNC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	1831	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	547.887747969418	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	-53	True	NA	NA	NA	138956102	139019068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138956273_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.24849.17	chr4	+	176	1	Intergenic	novelGene_20500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAAAAGAAGAAGA	9182	False	NA	NA	False	NA	NA	NA	138982430	138982606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_138982400_138982600
ES.24849.18	chr4	+	8851	2	ISM	ENSMUSG00000028745.19	ENSMUST00000042675.9	1604	9	48895	-6	-6668	6	intron_retention	FALSE	canonical	3	1735	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAAGAAACT	NA	False	NA	-21	True	NA	NA	NA	139009588	139019100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139014406_139015066
ES.24849.19	chr4	+	5203	2	ISM	ENSMUSG00000028745.19	ENSMUST00000042675.9	1604	9	52020	517	-3543	-174	intron_retention	FALSE	canonical	3	1735	junction_1	0	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCAAGGCCTGCT	NA	False	NA	18	True	AATAAA	-18	NA	139012713	139018577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139014406_139015066
ES.24849.2	chr4	+	1665	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	-6	15	-6	-11	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGGGACACAATCGGC	NA	False	NA	-7	True	NA	NA	NA	138920203	139019114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.24849.3	chr4	+	1162	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	-3	515	-3	-137	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACCGTGTGGTTTTGTT	NA	False	NA	55	True	NA	NA	NA	138920206	139018614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.24849.4	chr4	+	1327	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	3	344	3	34	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGTGTGTGTGGGAG	NA	False	NA	44	True	AAGAAA	-11	NA	138920212	139018785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.24849.5	chr4	+	4820	8	ISM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	24	0	1	0	intron_retention	FALSE	canonical	3	1402	junction_1	119.448050359534	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	False	NA	8	True	NA	NA	NA	138920233	139019129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066
ES.24849.6	chr4	+	4263	8	ISM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	4	492	4	-174	intron_retention	FALSE	canonical	3	1402	junction_1	119.448050359534	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCAAGGCCTGCT	NA	False	NA	18	True	AATAAA	-18	NA	138920238	139018577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066
ES.24849.8	chr4	+	8080	8	NIC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1402	junction_1	115.723103720449	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	False	NA	8	True	NA	NA	NA	138920247	139019129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139014406_139015066_139015144_139018313
ES.24849.9	chr4	+	1683	10	NNC	ENSMUSG00000028745.19	novel	1702	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	686.619595653811	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	-53	True	NA	NA	NA	138920248	139019068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_138920340_138932552_138932662_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ES.2485.1	chr10	-	4739	6	Antisense	novelGene_ENSMUSG00000019984.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	24758580	24748156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_24749482_24750450_24750582_24751494_24751591_24752835_24752939_24754285_24754359_24755569
ES.24850.1	chr4	-	5936	1	Intergenic	novelGene_20499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCCTTTAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	138940688	138934752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138934800_138940700
ES.24851.1	chr4	-	3086	1	Intergenic	novelGene_20501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAGGAAATCAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	139001079	138997993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_138998000_139001100
ES.24852.1	chr4	-	179	1	Intergenic	novelGene_20502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAATCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	139006965	139006786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_139006800_139007000
ES.24853.1	chr4	+	171	1	Intergenic	novelGene_20503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	139020469	139020640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_139020500_139020600
ES.24854.1	chr4	-	5996	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	34	-4498	4	-1	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGAATTCTTTGA	NA	False	NA	NA	False	AATAAA	-17	NA	139037985	139021340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.2	chr4	-	1426	9	NNC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.7922893498553	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTCTGCTGCTCCTT	NA	False	NA	0	True	AGTAAA	-18	NA	139037977	139025835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139033935_139035039_139035162_139037939
ES.24854.3	chr4	-	1506	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	28	-2	-2	2	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTGCTCCT	NA	False	NA	-1	True	AGTAAA	-17	NA	139037991	139025836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.4	chr4	-	2669	8	NIC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	14	junction_6	47.5570548855557	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTGTTTCTGCTGCTC	NA	False	NA	-3	True	AGTAAA	-15	NA	139037982	139025838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139033920_139035039_139035162_139037939
ES.24854.5	chr4	-	3358	7	NIC	ENSMUSG00000028744.16	novel	2756	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	103	junction_6	19.9784606236038	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGCCTGTTTCTGCTGC	NA	False	NA	-5	True	AGTAAA	-13	NA	139037991	139025840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.6	chr4	-	2439	7	NIC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	4	-1	intron_retention	FALSE	canonical	3	103	junction_6	14.7958327466441	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	False	NA	-6	True	AGTAAA	-12	NA	139037985	139025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.7	chr4	-	1694	9	NNC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	47.6963048883244	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	False	NA	-6	True	AGTAAA	-12	NA	139038010	139025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028878_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.8	chr4	-	1913	8	NNC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_2	50.9677769351802	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	False	NA	-6	True	AGTAAA	-12	NA	139037992	139025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139026281_139027536_139027737_139028322_139028416_139028560_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ES.24854.9	chr4	-	1052	6	NNC	ENSMUSG00000028744.16	novel	1532	9	NA	NA	8273	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	55.3664158131985	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	False	NA	-6	True	AGTAAA	-12	NA	139029675	139025841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029572
ES.24855.1	chr4	+	1328	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	-33	-7	-33	7	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGCTGCCCAACACCT	NA	False	NA	36	True	NA	NA	NA	139038021	139045744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ES.24855.2	chr4	+	1828	6	NNC	ENSMUSG00000028743.8	novel	1288	7	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_3	120.712219762541	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTCTCCTCTGCTGCC	NA	False	NA	28	True	AATAAA	-39	NA	139038069	139045736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139038388_139041414_139041603_139041777_139041883_139044000_139044118_139044244_139045011_139045402
ES.24855.3	chr4	+	1933	5	NIC	ENSMUSG00000028743.8	novel	1288	7	NA	NA	17	-1	intron_retention	FALSE	canonical	3	272	junction_1	31.7204586978184	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTCTCCTCTGCTGCC	NA	False	NA	28	True	AATAAA	-39	NA	139038071	139045736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139045011_139045402
ES.24855.4	chr4	+	1628	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	20	-360	20	360	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGATCAGGATTCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	139038074	139046097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ES.24856.1	chr4	-	3266	5	Antisense	novelGene_ENSMUSG00000028743.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGGGAAGAGACACGGGG	NA	False	NA	NA	False	NA	NA	NA	139047354	139039861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139040204_139043841_139045008_139045399_139046310_139046372_139046487_139046620
ES.24856.2	chr4	-	1698	1	Antisense	novelGene_ENSMUSG00000028743.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	139041572	139039874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139039900_139041600
ES.24856.3	chr4	-	3053	4	Antisense	novelGene_ENSMUSG00000028743.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAGTACAGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	139047354	139043711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139045008_139045399_139046310_139046372_139046482_139046616
ES.24856.4	chr4	-	861	1	Intergenic	novelGene_20504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGCCACTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	139047355	139046494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_139046500_139047400
ES.24857.1	chr4	-	170	1	Intergenic	novelGene_20505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATGTATATA	NA	False	NA	NA	False	NA	NA	NA	139051728	139051558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_139051600_139051700
ES.24858.1	chr4	+	5860	22	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	-203	221	intron_retention	FALSE	canonical	3	332	junction_13	35.438618647035	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139079694	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.11	chr4	+	4949	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	1	1276	1	218	multi-exon	FALSE	non_canonical	0	0	junction_13	89.6176912139138	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTTGTTTTGTGTCT	NA	False	NA	14	True	AATAAA	-16	NA	139079904	139104765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.12	chr4	+	8514	21	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	3	222	intron_retention	FALSE	canonical	3	332	junction_13	32.7091348097133	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTGTCTTCAG	NA	False	NA	18	True	AATAAA	-20	NA	139079906	139104769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.13	chr4	+	4784	24	NNC	ENSMUSG00000078517.13	novel	6232	24	NA	NA	5	217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	88.3072056566647	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139079908	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656_139103622_139103772
ES.24858.14	chr4	+	6350	22	NIC	ENSMUSG00000078517.13	novel	6226	23	NA	NA	5	217	intron_retention	FALSE	canonical	3	332	junction_16	32.0361190716052	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139079908	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.15	chr4	+	4657	24	NNC	ENSMUSG00000078517.13	novel	6232	24	NA	NA	5	221	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	88.3072056566647	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139079908	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656_139103684_139103965
ES.24858.16	chr4	+	3415	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	7	2804	7	-1	multi-exon	FALSE	non_canonical	0	0	junction_13	89.6176912139138	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTGTCTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	139079910	139103237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.19	chr4	+	4948	23	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	-3	215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	87.8083116041805	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTTGTTTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	139079916	139104762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102633
ES.24858.2	chr4	+	5153	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-220	-227	-197	227	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTCTTCAGAGTTC	NA	False	NA	23	True	AATAAA	-25	NA	139079700	139104774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.21	chr4	+	7888	20	NNC	ENSMUSG00000078517.13	novel	6226	23	NA	NA	0	224	intron_retention	FALSE	canonical	0	0	junction_16	93.9919251556209	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTGTCTTCAGAG	NA	False	NA	20	True	AATAAA	-22	NA	139079919	139104771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097052_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.23	chr4	+	5518	21	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	-1	intron_retention	FALSE	canonical	3	332	junction_15	32.8272371667187	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTGTCTCTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	139079920	139103237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139092706_139092828_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.24	chr4	+	4896	23	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	89.4485516284627	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTTGTTTTGTGTCTT	NA	False	NA	15	True	AATAAA	-17	NA	139079920	139104766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102419_139102521_139102656
ES.24858.25	chr4	+	4221	20	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	221	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	90.9380173067884	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139079920	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098385_139102912
ES.24858.26	chr4	+	7426	16	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	215	intron_retention	FALSE	non_canonical	0	0	junction_15	100.895897945468	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTTGTTTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	139079920	139104762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139092706_139092828_139093848_139094404_139096940_139103950
ES.24858.27	chr4	+	4982	24	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	117.646453795842	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139079920	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097052_139097112_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.3	chr4	+	6381	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	-150	-5	-144	5	multi-exon	FALSE	non_canonical	0	0	junction_13	89.6176912139138	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTATATTGTGT	NA	False	NA	31	True	NA	NA	NA	139079753	139106046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.30	chr4	+	7290	21	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	222	intron_retention	FALSE	canonical	3	332	junction_15	32.6733454056973	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTGTCTTCAG	NA	False	NA	18	True	AATAAA	-20	NA	139079920	139104769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139090574_139090967_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.31	chr4	+	5027	24	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.108255941375	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139079920	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139081756_139081868_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102397_139102521_139102656
ES.24858.34	chr4	+	4005	16	NNC	ENSMUSG00000078517.13	novel	6226	23	NA	NA	6	216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	107.863782408905	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCTTTGTTTTGTGT	NA	False	NA	12	True	AATAAA	-14	NA	139079926	139104763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087946_139093778_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.35	chr4	+	4874	23	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	28	215	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	90.0929730980885	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTTGTTTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	139079948	139104762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086569_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.36	chr4	+	4902	22	ISM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	1464	-217	1464	217	3prime_fragment	FALSE	canonical	3	332	junction_12	35.1002451684366	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139081384	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.37	chr4	+	3772	15	NNC	ENSMUSG00000078517.13	novel	6226	23	NA	NA	2207	215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	111.03678835119	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTTGTTTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	139082127	139104762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088217_139093794_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.38	chr4	+	5886	20	ISM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	2480	-1477	2480	-17	3prime_fragment	FALSE	canonical	3	332	junction_10	36.5704268758741	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTTCATATTATTT	NA	False	NA	9	True	NA	NA	NA	139082400	139106024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.39	chr4	+	5410	18	NNC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	-1698	221	intron_retention	FALSE	canonical	0	0	junction_17	98.5822685264448	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139084859	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139093848_139094404_139094525_139097185_139097324_139098234_139099118_139101119_139101205_139102390_139102521_139102656_139103592_139103874
ES.24858.4	chr4	+	6377	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-166	-1505	-143	11	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATATTGTGTTTTGCC	NA	False	NA	37	True	NA	NA	NA	139079754	139106052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.41	chr4	+	3823	13	ISM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	9484	-217	2847	217	3prime_fragment	FALSE	canonical	3	332	junction_3	44.1023903358234	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139089404	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.42	chr4	+	5152	10	NNC	ENSMUSG00000078517.13	novel	3149	19	NA	NA	5667	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.383406171756	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTTCATATTATTT	NA	False	NA	9	True	NA	NA	NA	139092224	139106024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097052_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.43	chr4	+	2414	3	ISM	ENSMUSG00000078517.13	ENSMUST00000155700.2	3149	19	14475	-1530	14475	221	3prime_fragment	FALSE	canonical	3	439	junction_1	20	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139101032	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139101205_139102390_139102521_139102656
ES.24858.44	chr4	+	3621	3	ISM	ENSMUSG00000078517.13	ENSMUST00000155700.2	3149	19	14524	-2786	14524	-17	3prime_fragment	FALSE	canonical	3	439	junction_1	20	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTTCATATTATTT	NA	False	NA	9	True	NA	NA	NA	139101081	139106024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139101205_139102390_139102521_139102656
ES.24858.45	chr4	+	2794	2	ISM	ENSMUSG00000078517.13	ENSMUST00000155700.2	3149	19	15281	-1530	15281	221	3prime_fragment	FALSE	canonical	3	479	junction_1	0	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTTGTGTCTTCA	NA	False	NA	17	True	AATAAA	-19	NA	139101838	139104768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139102521_139102656
ES.24858.6	chr4	+	3434	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-37	1309	-14	0	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCTCTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	139079883	139103238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.7	chr4	+	6058	22	NIC	ENSMUSG00000078517.13	novel	6232	24	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	92.165654863989	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTATTTGTGTATAT	NA	False	NA	26	True	NA	NA	NA	139079900	139106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.8	chr4	+	4771	22	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	1	217	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	92.4112615964162	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTTTGTTTTGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	139079904	139104764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24858.9	chr4	+	5558	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	-16	-836	1	-658	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCTGCTCTAGTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	139079904	139105383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ES.24859.1	chr4	-	5097	4	FSM	ENSMUSG00000080708.2_ENSMUSG00000028741.14	ENSMUST00000139749.2	756	4	19	-4360	19	900	multi-exon	FALSE	canonical	3	786	junction_1	88.4282508905132	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAATAAAGAAAAAAGAAAA	5758	False	NA	NA	False	AATAAA	-7	NA	139079825	139071710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.10	chr4	-	1916	7	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	15	2	intron_retention	FALSE	canonical	3	786	junction_5	123.767254689329	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5711	False	NA	-10	True	AATAAA	-36	NA	139079872	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077806_139079579
ES.24859.11	chr4	-	1172	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	363.817738625779	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5729	False	NA	-10	True	AATAAA	-36	NA	139079854	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139076000_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.12	chr4	-	2259	4	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	908	junction_2	47.6724938163158	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5964	False	NA	-10	True	AATAAA	-36	NA	139079619	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139077029_139077746_139077806_139079579
ES.24859.13	chr4	-	947	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	362.89386765785	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTCTTTCTTTTTTTTT	5983	False	NA	-11	True	AATAAA	-35	NA	139079600	139074754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077051_139077746_139077806_139079579
ES.24859.14	chr4	-	3064	3	NNC	ENSMUSG00000028741.14	novel	662	2	NA	NA	-8	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	501	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5953	False	NA	-13	True	AATAAA	-33	NA	139079630	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139077673_139077708_139077806_139079579
ES.24859.15	chr4	-	2415	5	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	983	junction_3	91.2123209879016	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5944	False	NA	-13	True	AATAAA	-33	NA	139079639	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139075309_139075631_139076061_139076316_139077806_139079579
ES.24859.17	chr4	-	2429	6	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	983	junction_4	81.6098033326879	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5721	False	NA	-13	True	AATAAA	-33	NA	139079862	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139077806_139079579
ES.24859.18	chr4	-	1432	6	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	786	junction_3	139.204884971757	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5939	False	NA	-13	True	AATAAA	-33	NA	139079644	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139075309_139075631_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.19	chr4	-	2720	4	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	786	junction_2	105.021690881244	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5692	False	NA	-13	True	AATAAA	-33	NA	139079891	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139076399_139076924_139077806_139079579
ES.24859.2	chr4	-	1232	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	-10	-1	-10	1	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTGTTGTTTT	5686	False	NA	-1	True	AATAAA	-45	NA	139079897	139074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.20	chr4	-	996	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	369.873668449438	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTCTTTCTTTTTTT	5965	False	NA	-13	True	AATAAA	-33	NA	139079618	139074756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077084_139077746_139077806_139079579
ES.24859.22	chr4	-	934	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	460.331380194569	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCAGGAGACTCTTTC	5979	False	NA	-20	True	AATAAA	-26	NA	139079604	139074763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139076000_139076061_139076316_139076399_139076924_139077051_139077746_139077806_139079579
ES.24859.3	chr4	-	3216	3	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-12	4	intron_retention	FALSE	canonical	3	1002	junction_2	6.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTCTTTTTTTTTTTG	5727	False	NA	-8	True	AATAAA	-38	NA	139079856	139074751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139077806_139079579
ES.24859.5	chr4	-	3336	2	FSM	ENSMUSG00000028741.14	ENSMUST00000123968.2	662	2	-241	-2433	-18	3	multi-exon	FALSE	canonical	3	1002	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5721	False	NA	-9	True	AATAAA	-37	NA	139079862	139074752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139077806_139079579
ES.24859.6	chr4	-	1713	6	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-10	3	intron_retention	FALSE	canonical	3	786	junction_3	84.9126610111825	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTTTCTTTTTTTTTTT	5729	False	NA	-9	True	AATAAA	-37	NA	139079854	139074752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.7	chr4	-	2419	5	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	786	junction_3	93.3608590363221	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5740	False	NA	-10	True	AATAAA	-36	NA	139079843	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139076061_139076316_139076399_139076924_139077806_139079579
ES.24859.8	chr4	-	1179	7	NIC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-22	2	intron_retention	FALSE	canonical	3	786	junction_4	127.076639167953	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5939	False	NA	-10	True	AATAAA	-36	NA	139079644	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139075117_139075231_139075309_139075631_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ES.24859.9	chr4	-	1019	8	NNC	ENSMUSG00000028741.14	novel	1221	8	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	474.325944937462	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTTTCTTTTTTTTTT	5920	False	NA	-10	True	AATAAA	-36	NA	139079663	139074753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076829_139076964_139077746_139077806_139079579
ES.2486.1	chr10	-	2627	3	Antisense	novelGene_ENSMUSG00000019984.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2642	False	NA	NA	False	AAAAAG	-19	NA	24785129	24780095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_24781957_24783079_24783248_24784531
ES.24860.1	chr4	-	3050	1	Antisense	novelGene_ENSMUSG00000078517.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTATGTAGCCCAAG	4203	False	NA	NA	False	NA	NA	NA	139088848	139085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139085800_139088800
ES.24861.1	chr4	-	172	1	Intergenic	novelGene_20506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATGACAAAGGG	8859	False	NA	NA	False	NA	NA	NA	139100434	139100262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_139100300_139100400
ES.24862.1	chr4	-	2851	1	Antisense	novelGene_ENSMUSG00000078517.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAAGATTTTAGCCTT	2890	False	NA	NA	False	NA	NA	NA	139106403	139103552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139103600_139106400
ES.24863.1	chr4	+	15998	106	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-50	26	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_69	98.5220092357788	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTTCTCTGGGGTCT	NA	False	NA	106	True	NA	NA	NA	139107919	139216925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139170002_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.10	chr4	+	15710	107	NIC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-11	-255	combination_of_known_junctions	FALSE	canonical	0	0	junction_53	99.0528462899202	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCATCTCTCCGTGTGC	NA	False	NA	28	True	NA	NA	NA	139107958	139216586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163259_139163344_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.13	chr4	+	2023	11	FSM	ENSMUSG00000066036.15	ENSMUST00000133220.2	1626	11	4	-401	4	401	multi-exon	FALSE	canonical	3	89	junction_4	10.1370607179793	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAAGCAAAACA	NA	False	NA	NA	False	NA	NA	NA	139107983	139125410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604
ES.24863.14	chr4	+	4515	17	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	15	84380	5	7452	5prime_fragment	FALSE	canonical	3	88	junction_15	10.936607106411	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGCATATGGTCTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	139107984	139132461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057
ES.24863.15	chr4	+	15933	107	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	100.742569139064	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTCTAGCTGCTGCT	NA	False	NA	22	True	AATAAA	-23	NA	139107986	139216841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143968_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163259_139163344_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139170002_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.19	chr4	+	12346	82	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-4796	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_48	91.475258447808	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAGGGGTCTAGCTG	5845	False	NA	17	True	AATAAA	-18	NA	139136984	139216836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139216635
ES.24863.2	chr4	+	15662	106	FSM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	-44	310	-44	-252	multi-exon	FALSE	canonical	0	0	junction_69	97.5331440845179	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCTCCGTGTGCACT	NA	False	NA	31	True	NA	NA	NA	139107925	139216589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.20	chr4	+	12303	82	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	29961	311	-3850	-253	3prime_fragment	FALSE	canonical	0	0	junction_45	102.521561778375	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATCTCTCCGTGTGCAC	6791	False	NA	30	True	NA	NA	NA	139137930	139216588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.21	chr4	+	12433	82	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-3850	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_45	103.302116322473	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTCTAGCTGCTGCT	6791	False	NA	22	True	AATAAA	-23	NA	139137930	139216841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167724_139167853_139167955_139168134_139168502_139168608_139170002_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213409_139213459_139216477
ES.24863.24	chr4	+	12377	82	NIC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-1814	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	104.858294868568	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGGTCTAGCTGCTGC	8827	False	NA	21	True	AATAAA	-22	NA	139139966	139216840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163259_139163344_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.25	chr4	+	11805	77	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	35891	-8	338	8	3prime_fragment	FALSE	canonical	0	0	junction_40	101.242491428437	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACTGCTGGAGTTGAA	NA	False	NA	88	True	NA	NA	NA	139143860	139216907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.26	chr4	+	11334	74	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	37741	60	2188	-2	3prime_fragment	FALSE	canonical	0	0	junction_37	99.8493498365839	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGGGTCTAGCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	139145710	139216839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.29	chr4	+	9933	65	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	8999	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	97.2886682041516	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGGGTCTAGCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	139152521	139216839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213463_139216477
ES.24863.3	chr4	+	15981	106	FSM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	-41	-12	-41	12	multi-exon	FALSE	canonical	0	0	junction_69	97.5331440845179	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTGGAGTTGAATTGT	NA	False	NA	92	True	NA	NA	NA	139107928	139216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.30	chr4	+	9513	63	NIC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-8158	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	98.3954478211522	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139154162	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206724_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.31	chr4	+	8387	57	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-1362	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	98.1455587458272	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139160958	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194529_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.32	chr4	+	8348	56	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	53333	66	-1018	-8	3prime_fragment	FALSE	canonical	0	0	junction_19	93.2979126018786	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGGAAAGGGGTCTAG	NA	False	NA	14	True	AATAAA	-15	NA	139161302	139216833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.33	chr4	+	7685	51	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	5400	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.1500504329977	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATTGGAAAGGGGTCTA	NA	False	NA	13	True	AATAAA	-14	NA	139167720	139216832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139167853_139167928_139168134_139168502_139168608_139170002_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.34	chr4	+	7676	51	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	59751	55	5400	3	3prime_fragment	FALSE	canonical	0	0	junction_14	89.6645414865877	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139167720	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.36	chr4	+	7356	49	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	60531	67	6180	-9	3prime_fragment	FALSE	canonical	0	0	junction_12	87.9429043589267	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATTGGAAAGGGGTCTA	NA	False	NA	13	True	AATAAA	-14	NA	139168500	139216832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.37	chr4	+	7113	49	ISM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	60531	310	6180	-252	3prime_fragment	FALSE	canonical	0	0	junction_12	87.9429043589267	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCTCCGTGTGCACT	NA	False	NA	31	True	NA	NA	NA	139168500	139216589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.38	chr4	+	7255	48	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	62023	7	7672	-7	3prime_fragment	FALSE	canonical	0	0	junction_11	87.5006719239544	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAAAGGGGTCTAGC	NA	False	NA	15	True	AATAAA	-16	NA	139169992	139216834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.39	chr4	+	7007	47	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	8388	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	89.2406556031295	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTCTAGCTGCTGCT	NA	False	NA	22	True	AATAAA	-23	NA	139170708	139216841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213409_139213459_139216477
ES.24863.4	chr4	+	2279	11	FSM	ENSMUSG00000066036.15	ENSMUST00000133220.2	1626	11	-47	-606	-37	606	multi-exon	FALSE	canonical	3	89	junction_4	10.1370607179793	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGCCAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	139107932	139125615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604
ES.24863.40	chr4	+	7104	47	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	8422	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.2719984498091	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139170742	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139170885_139171905_139172003_139172576_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206724_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.42	chr4	+	6745	44	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	65198	-3	10847	3	3prime_fragment	FALSE	canonical	0	0	junction_7	85.2790602545641	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139173167	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.43	chr4	+	6750	44	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	10854	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	93.4297918977756	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139173174	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191418_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.46	chr4	+	6372	41	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-12832	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.1801996175417	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	NA	False	NA	25	True	AATAAA	-26	NA	139177737	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191634_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.47	chr4	+	6452	40	NIC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-12777	-253	intron_retention	FALSE	canonical	0	0	junction_4	81.8447159439273	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATCTCTCCGTGTGCAC	NA	False	NA	30	True	NA	NA	NA	139177792	139216588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139213459_139216477
ES.24863.48	chr4	+	6058	40	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-12009	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.1879511998021	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGGGTCTAGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	139178560	139216838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192574_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.5	chr4	+	1685	11	FSM	ENSMUSG00000066036.15	ENSMUST00000133220.2	1626	11	-45	-14	-35	14	multi-exon	FALSE	canonical	3	89	junction_4	10.1370607179793	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTTTCCTCGCTCCA	NA	False	NA	NA	False	NA	NA	NA	139107934	139125023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604
ES.24863.51	chr4	+	5412	37	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-10079	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_35	89.6113349862878	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAAAGGGGTCTAGCT	NA	False	NA	16	True	AATAAA	-17	NA	139180490	139216835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206724_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213409_139213459_139216477
ES.24863.54	chr4	+	5171	34	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-7798	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	85.01940576838	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCATCTCTCCGTGTG	NA	False	NA	27	True	NA	NA	NA	139182771	139216585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191634_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.55	chr4	+	4788	32	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	77433	3	-5167	-3	3prime_fragment	FALSE	canonical	3	197	junction_2	67.7508903451448	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGGGTCTAGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	139185402	139216838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.56	chr4	+	4154	30	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-3208	-253	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_28	95.7574224156088	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATCTCTCCGTGTGCAC	NA	False	NA	30	True	NA	NA	NA	139187361	139216588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139215217_139215283_139216477
ES.24863.57	chr4	+	4679	28	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-2945	-7	intron_retention	FALSE	non_canonical	0	0	junction_25	80.7249219977949	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAAAGGGGTCTAGC	NA	False	NA	15	True	AATAAA	-16	NA	139187624	139216834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208146_139209768_139209994_139212595_139213459_139216477
ES.24863.58	chr4	+	3786	28	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-1363	-118	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_26	94.9664585940084	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGTCTGTAGCTCAA	988	False	NA	-96	True	NA	NA	NA	139189206	139216723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206724_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213409_139213459_139216477
ES.24863.59	chr4	+	3743	25	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	82619	5	19	-5	3prime_fragment	FALSE	canonical	3	210	junction_1	62.3590493967529	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAGGGGTCTAGCTG	2370	False	NA	17	True	AATAAA	-18	NA	139190588	139216836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.60	chr4	+	3211	21	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	84298	-3	1698	3	3prime_fragment	FALSE	canonical	3	233	junction_1	55.8967798714738	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	4049	False	NA	25	True	AATAAA	-26	NA	139192267	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.62	chr4	+	3158	15	NIC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	6415	-2	intron_retention	FALSE	canonical	3	267	junction_6	47.5304413733226	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGGGTCTAGCTGCTG	2875	False	NA	20	True	AATAAA	-21	NA	139196984	139216839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139213459_139216477
ES.24863.63	chr4	+	2107	12	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	91811	0	-4583	0	3prime_fragment	FALSE	canonical	3	267	junction_2	50.4513512502411	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTCTAGCTGCTGCT	500	False	NA	22	True	AATAAA	-23	NA	139199780	139216841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.64	chr4	+	4354	10	NIC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-4561	3	intron_retention	FALSE	canonical	3	17	junction_6	114.744159861068	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTAGCTGCTGCTTGC	522	False	NA	25	True	AATAAA	-26	NA	139199802	139216844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206724_139206887_139207952_139209994_139212595_139213459_139216477
ES.24863.66	chr4	+	1651	11	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-3863	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.246138978534	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAGGGGTCTAGCTG	-1	True	NA	17	True	AATAAA	-18	NA	139200500	139216836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139200556_139200872_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213409_139213459_139216477
ES.24863.67	chr4	+	3440	10	NIC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-3843	-14	intron_retention	FALSE	canonical	3	267	junction_1	52.9970882032654	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTTGCAGTGACACAC	19	False	NA	66	True	NA	NA	NA	139200520	139216885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.68	chr4	+	1782	7	NNC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	74	-253	intron_retention	FALSE	canonical	0	0	junction_5	140.069030600391	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATCTCTCCGTGTGCAC	3936	False	NA	30	True	NA	NA	NA	139204437	139216588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209998_139212595_139213459_139216477
ES.24863.69	chr4	+	1449	6	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	98501	5	33	-5	3prime_fragment	FALSE	canonical	3	353	junction_1	29.2205407205274	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAGGGGTCTAGCTG	1266	False	NA	17	True	AATAAA	-18	NA	139206470	139216836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.7	chr4	+	15780	105	NIC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	-24	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_57	99.1058154092331	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATTGGAAAGGGGTCTA	NA	False	NA	13	True	AATAAA	-14	NA	139107945	139216832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24863.70	chr4	+	1897	5	NIC	ENSMUSG00000066036.15	novel	15798	106	NA	NA	194	-5	intron_retention	FALSE	canonical	3	353	junction_1	29.8872882677569	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAGGGGTCTAGCTG	1427	False	NA	17	True	AATAAA	-18	NA	139206631	139216836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139206887_139207952_139208148_139209768_139209994_139212595_139213459_139216477
ES.24863.71	chr4	+	4359	2	ISM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	101908	3	2187	-3	intron_retention	FALSE	canonical	3	430	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGGGTCTAGCTGCT	2421	False	NA	19	True	AATAAA	-20	NA	139209877	139216838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139209994_139212595
ES.24863.9	chr4	+	15943	106	NNC	ENSMUSG00000066036.15	novel	15928	106	NA	NA	-15	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	99.7353759476521	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGACTGCTGGAGTTGA	NA	False	NA	87	True	NA	NA	NA	139107954	139216906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130066_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190723_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ES.24864.1	chr4	-	2154	2	Antisense	novelGene_ENSMUSG00000066036.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGGGTACCAACCAG	9299	False	NA	NA	False	NA	NA	NA	139177273	139174869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139175189_139175438
ES.24864.2	chr4	-	2404	1	Antisense	novelGene_ENSMUSG00000066036.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGGGTACCAACCAG	9299	False	NA	NA	False	NA	NA	NA	139177273	139174869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139174900_139177300
ES.24865.1	chr4	+	176	1	Intergenic	novelGene_20507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	139222622	139222798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_139222600_139222800
ES.24866.1	chr4	-	182	1	Intergenic	novelGene_20508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139267863	139267681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_139267700_139267900
ES.24867.1	chr4	+	3553	1	Genic_Genomic	ENSMUSG00000041025.16	novel	NA	NA	NA	NA	-85	-38895	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAAAAGGAAAATCTCTG	NA	False	NA	NA	False	AAGAAA	-24	NA	139301945	139305498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_139301900_139305500
ES.24868.1	chr4	+	1586	9	NNC	ENSMUSG00000094439.2	novel	4402	30	NA	NA	-325	-45621	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.79843682124227	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	TTTAAA	-7	NA	139330171	139344381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139330232_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
ES.24869.1	chr4	-	3744	1	Antisense	novelGene_ENSMUSG00000094439.2_AS_novelGene_ENSMUSG00000041025.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAATCTCTCTCTCTC	8451	False	NA	NA	False	NA	NA	NA	139344111	139340367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_139340400_139344100
ES.2487.1	chr10	-	161	1	Intergenic	novelGene_1885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAACAAATAAATAA	9728	False	NA	NA	False	NA	NA	NA	24914543	24914382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_24914400_24914500
ES.24870.1	chr4	+	3401	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	-17	-2	-17	2	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGATCGTGTGTGTCCT	NA	False	NA	28	True	NA	NA	NA	139350159	139377003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.10	chr4	+	3124	15	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-8	-6	intron_retention	TRUE	canonical	0	0	junction_9	61.0403011734619	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	NA	False	NA	17	True	NA	NA	NA	139350411	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369401_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.11	chr4	+	2989	14	NIC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	2	junction_11	60.1107459207414	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATATTTTGATCGTGT	NA	False	NA	21	True	NA	NA	NA	139350411	139376996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139371422_139371545_139372289_139372409_139375468
ES.24870.12	chr4	+	2627	13	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	1	3	junction_12	60.2381846413792	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATATTTTGATCGTGT	NA	False	NA	21	True	NA	NA	NA	139350411	139376996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370760_139375648
ES.24870.13	chr4	+	4041	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	242	-901	-1	901	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGGACCCTGGACTC	NA	False	NA	NA	False	ATTAAA	-16	NA	139350418	139377902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.15	chr4	+	2954	16	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	11	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	59.242102145912	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGATCGTGTGTGT	NA	False	NA	25	True	NA	NA	NA	139350430	139377000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468_139376569_139376741
ES.24870.17	chr4	+	3102	15	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	81.0093532014819	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGATCGTGTGTGT	NA	False	NA	25	True	NA	NA	NA	139350439	139377000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361288_139361971_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375474
ES.24870.18	chr4	+	3010	13	ISM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	10968	9	10725	-6	3prime_fragment	FALSE	canonical	3	190	junction_1	22.7961985134949	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	1038	False	NA	17	True	NA	NA	NA	139361144	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.19	chr4	+	2339	8	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	15346	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	83.8049241162024	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	2158	False	NA	17	True	NA	NA	NA	139365765	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370848_139371422_139371545_139372289_139372409_139375468
ES.24870.2	chr4	+	3151	14	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-39	-6	intron_retention	FALSE	canonical	0	0	junction_10	62.3137698840293	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	NA	False	NA	17	True	NA	NA	NA	139350380	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369576_139370661_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.20	chr4	+	2261	7	NNC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	18760	-6	intron_retention	FALSE	canonical	3	14	junction_1	86.9471423081607	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	5572	False	NA	17	True	NA	NA	NA	139369179	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139369278_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.21	chr4	+	3140	3	NIC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	19810	0	intron_retention	FALSE	canonical	3	214	junction_2	21.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	6622	False	NA	23	True	NA	NA	NA	139370229	139376998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139370854_139371422_139372409_139375468
ES.24870.22	chr4	+	3784	1	NIC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	22793	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATATTTTGATCGTGT	9605	False	NA	21	True	NA	NA	NA	139373212	139376996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139373200_139377000
ES.24870.3	chr4	+	2620	13	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-11	-6	intron_retention	FALSE	non_canonical	0	0	junction_12	61.0388651234241	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	NA	False	NA	17	True	NA	NA	NA	139350408	139376992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370751_139375645
ES.24870.5	chr4	+	3410	16	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_1	77.9593626335043	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATATTTTGATCGTGT	NA	False	NA	21	True	NA	NA	NA	139350409	139376996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139354827_139355094_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24870.6	chr4	+	3987	15	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_8	90.5891149923767	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	23	True	NA	NA	NA	139350409	139376998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364328_139364420_139364496_139364572_139365685_139365874_139366047_139366203_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139372409_139375468
ES.24870.7	chr4	+	3149	15	NNC	ENSMUSG00000028737.16	novel	3382	15	NA	NA	-10	-7	intron_retention	FALSE	non_canonical	0	0	junction_14	61.2794285820857	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACTTATATTTTGAT	NA	False	NA	16	True	NA	NA	NA	139350409	139376991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372413_139375462
ES.24870.8	chr4	+	5521	12	NIC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	-10	0	intron_retention	FALSE	canonical	3	190	junction_3	20.3697231162996	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATTTTGATCGTGTGT	NA	False	NA	23	True	NA	NA	NA	139350409	139376998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139369873_139370700_139370854_139371422_139372409_139375468
ES.24870.9	chr4	+	4543	14	ISM	ENSMUSG00000028737.16	ENSMUST00000146309.8	4142	15	207	-9	-8	6	intron_retention	FALSE	canonical	3	190	junction_3	23.5665995719496	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCGTGTGTGTCCTTTGC	NA	False	NA	32	True	NA	NA	NA	139350411	139377007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ES.24871.1	chr4	-	3756	6	NNC	ENSMUSG00000028736.14	novel	5854	9	NA	NA	43066	-995	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACAGTTTGTGTCGTG	NA	False	NA	NA	False	AAGAAA	-1	NA	139517252	139465367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139468214_139476242_139476490_139506886_139507090_139508071_139508238_139511793_139511994_139517158
ES.24872.1	chr4	+	4810	1	Antisense	novelGene_ENSMUSG00000078234.7_AS_novelGene_ENSMUSG00000089294.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGGGCGTCTGTTGAA	NA	False	NA	NA	False	NA	NA	NA	139692909	139697719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_139692900_139697700
ES.24872.2	chr4	+	633	2	Antisense	novelGene_ENSMUSG00000089294.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATGAGACCTTAGAGA	NA	False	NA	NA	False	AATACA	-17	NA	139694368	139695606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_139694737_139695341
ES.24873.1	chr4	-	4064	2	Genic_Genomic	ENSMUSG00000078234.7	novel	7807	1	NA	NA	4108	803	multi-exon	FALSE	canonical	2	2	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAAGAAAATACAACAATG	NA	False	NA	NA	False	NA	NA	NA	139691229	139686727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_139688684_139689121
ES.24873.2	chr4	-	6435	2	Genic_Genomic	ENSMUSG00000078234.7	novel	7807	1	NA	NA	933	-1	multi-exon	FALSE	canonical	2	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGTCTGGGTTGCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	139694404	139687531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_139688684_139689121
ES.24873.3	chr4	-	6300	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	300	1207	300	-1207	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	139695037	139688737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139688700_139695000
ES.24873.4	chr4	-	5490	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	370	1947	370	-1947	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAGGCCTCCTCCAAAA	NA	False	NA	NA	False	AATAAA	-27	NA	139694967	139689477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139689500_139695000
ES.24873.5	chr4	-	5081	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	401	2325	401	-2325	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATGTATTTTTAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	139694936	139689855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139689900_139694900
ES.24873.6	chr4	-	4145	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	370	3292	370	-3292	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTGTGAGTGTGATC	NA	False	NA	NA	False	NA	NA	NA	139694967	139690822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139690800_139695000
ES.24874.1	chr4	+	1333	5	NNC	ENSMUSG00000086164.2	novel	594	3	NA	NA	-4579	358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTTGGAAGCACCTG	NA	False	NA	NA	False	NA	NA	NA	139865604	139872302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_139866032_139868790_139868906_139870344_139870589_139870791_139870952_139871915
ES.24874.2	chr4	+	2243	2	ISM	ENSMUSG00000086164.2	ENSMUST00000137283.2	594	3	-327	-358	-327	358	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTTGGAAGCACCTG	NA	False	NA	NA	False	NA	NA	NA	139869856	139872302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_139870589_139870791
ES.24875.1	chr4	+	176	1	Intergenic	novelGene_20509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATTCTA	4793	False	NA	NA	False	NA	NA	NA	139928250	139928426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_139928200_139928400
ES.24876.1	chr4	-	2190	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-213	2	-213	-2	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGCCCTATATTTT	NA	False	NA	-1	True	ATTAAA	-26	NA	139974308	139754158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ES.24876.2	chr4	-	1245	7	NNC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	203685	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	31.0250794609064	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATGTCTGGCCCTAT	NA	False	NA	-6	True	ATTAAA	-21	NA	139770410	139754163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139770300
ES.24876.3	chr4	-	2056	11	NNC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.9418810029384	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATGTCTGGCCCTAT	NA	False	NA	-6	True	ATTAAA	-21	NA	139974083	139754163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139756427_139756488_139761625_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ES.24876.4	chr4	-	1175	7	NIC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	13	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.6205622908313	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATGTCTGGCCCTAT	NA	False	NA	-6	True	ATTAAA	-21	NA	139974082	139754163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_139754390_139755034_139755074_139756008_139756095_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ES.24876.7	chr4	-	1754	7	NNC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	5	-2892	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	22.5979350089044	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTTGACTGAATCACTG	NA	False	NA	NA	False	NA	NA	NA	139974090	139757048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139757380_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ES.24876.8	chr4	-	1613	6	ISM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	-2	7322	-2	-7322	5prime_fragment	FALSE	canonical	3	57	junction_2	3.57770876399966	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGGTGTTTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	139974097	139761478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ES.24876.9	chr4	-	1089	4	NNC	ENSMUSG00000040972.9	novel	1979	10	NA	NA	-33	-65565	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.7993288515027	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAATATCCCTGGCC	NA	False	NA	NA	False	AATAAA	-15	NA	139974128	139819721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_139820060_139834565_139834688_139884771_139884885_139973612
ES.24877.1	chr4	-	176	1	Intergenic	novelGene_20510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAGAAACTGCA	NA	False	NA	NA	False	NA	NA	NA	140027712	140027536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140027500_140027700
ES.24878.1	chr4	-	174	1	Intergenic	novelGene_20511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGAAGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	140086754	140086580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140086600_140086800
ES.24879.1	chr4	+	974	2	NIC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	-158	-776	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCGGTCTTGTCCCTA	NA	False	NA	NA	False	AATACA	-13	NA	140107782	140112109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140108031_140111383
ES.24879.2	chr4	+	636	2	ISM	ENSMUSG00000087084.2	ENSMUST00000126252.2	1720	3	-151	3090	-151	-3090	5prime_fragment	FALSE	canonical	3	28	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTTTTTTTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	140107789	140109795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140108031_140109400
ES.24879.3	chr4	+	787	2	NNC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	3284	-776	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCGGTCTTGTCCCTA	NA	False	NA	NA	False	AATACA	-13	NA	140111224	140112109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140111286_140111383
ES.24879.4	chr4	+	928	2	NNC	ENSMUSG00000087084.2	novel	1720	3	NA	NA	3285	-634	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGGGAGTGTGATGAT	NA	False	NA	NA	False	AATACA	-22	NA	140111225	140112251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140111286_140111383
ES.2488.1	chr10	-	204	1	Intergenic	novelGene_1886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGCGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	24933158	24932954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_24933000_24933200
ES.24880.1	chr4	-	3250	1	Intergenic	novelGene_20512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTGGTTATGGTG	NA	False	NA	NA	False	NA	NA	NA	140129783	140126533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140126500_140129800
ES.24881.1	chr4	-	215	1	Intergenic	novelGene_20513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGCCACACCCACAGG	NA	False	NA	NA	False	AATACA	-18	NA	140132062	140131847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140131800_140132100
ES.24882.1	chr4	+	4751	1	Intergenic	novelGene_20514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCATAGAGAAATTACCCA	1852	False	NA	NA	False	AATAAA	-35	NA	140133725	140138476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140133700_140138500
ES.24883.1	chr4	+	178	1	Intergenic	novelGene_20515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAATAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	140204585	140204763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140204600_140204800
ES.24884.1	chr4	+	1748	1	Intergenic	novelGene_20516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	140227674	140229422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140227700_140229400
ES.24885.1	chr4	+	3827	3	Antisense	novelGene_ENSMUSG00000040964.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGCCAAGTTCATGCC	NA	False	NA	NA	False	AAAACA	-12	NA	140380075	140384154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_140380256_140380432_140381321_140381395
ES.24886.1	chr4	-	5300	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-41	-877	-41	877	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTATAGAGTCATTCAT	NA	False	NA	NA	False	AGTAAA	-18	NA	140376108	140240918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.10	chr4	-	4004	22	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-330	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	49.1805411070554	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140319681	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140319460
ES.24886.11	chr4	-	2878	14	NNC	ENSMUSG00000040964.17	novel	3043	16	NA	NA	1721	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.7480756102434	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140302684	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292592_140295649_140295832_140297567_140297714_140302594
ES.24886.12	chr4	-	4596	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-103	0	-97	0	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376164	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.15	chr4	-	4390	26	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.2958143548092	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376080	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269947_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140338505_140338724_140344223_140344304_140375944
ES.24886.16	chr4	-	4727	29	NIC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	60.6741884400372	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376170	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.17	chr4	-	4585	28	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	54.7729319470309	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376096	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.18	chr4	-	4484	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.127685679657	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376059	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291619_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.19	chr4	-	4683	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	55.1323883657654	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376046	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321251_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.2	chr4	-	5390	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-20	-877	-14	877	multi-exon	TRUE	canonical	3	51	junction_21	42.1702734351014	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTATAGAGTCATTCAT	NA	False	NA	NA	False	AGTAAA	-18	NA	140376081	140240918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.20	chr4	-	5523	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-7642	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	62.7195226417434	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140352018	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140350829_140351930_140351971
ES.24886.21	chr4	-	4727	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	61.3518104285207	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376121	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.22	chr4	-	5063	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	14708	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.6229596800067	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140361353	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279956_140290020_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140330045_140330165_140337841_140337876_140338537_140338724_140344223_140344304_140360666
ES.24886.23	chr4	-	5222	20	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	63	-1	intron_retention	FALSE	canonical	3	130	junction_19	25.8586612203881	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140319288	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128
ES.24886.24	chr4	-	4421	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	576	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	54.1711963917959	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140375485	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375439
ES.24886.25	chr4	-	3581	3	ISM	ENSMUSG00000040964.17	ENSMUST00000105797.9	3507	18	58242	1	44805	-1	3prime_fragment	FALSE	canonical	3	229	junction_1	5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140250887	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140242843_140244056_140244180_140248475
ES.24886.26	chr4	-	4687	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	8688	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	67.1494202719364	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140367373	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.27	chr4	-	4151	24	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	8682	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	47.0466124488379	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140367379	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140367186
ES.24886.28	chr4	-	4551	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	8699	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_27	52.3586869465367	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140367362	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.29	chr4	-	6380	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_25	63.5553613050645	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376075	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140343995_140344134_140344223_140344304_140375944
ES.24886.3	chr4	-	5614	30	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-54	874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.2953209158263	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCTATAGAGTCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	140376121	140240921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248042_140248185_140248475_140248651_140264079_140264229_140269944_140270100_140270286_140270324_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.30	chr4	-	4473	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	8697	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.2443253006313	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140367364	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140270286_140270324_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.31	chr4	-	4703	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	71.4310267435143	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376030	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140308916_140309102_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.33	chr4	-	4326	27	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	64.6120420380858	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376057	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.34	chr4	-	4455	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.3041246647167	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376076	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.35	chr4	-	4530	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_22	53.6994634341336	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTGTGGGGTTTATGGG	NA	False	NA	-3	True	AATAAA	-17	NA	140376141	140241796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319257_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.4	chr4	-	4505	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-122	-1	-122	1	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGGGTTTATGGGAT	NA	False	NA	-1	True	AATAAA	-19	NA	140376189	140241794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.40	chr4	-	4347	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_21	44.3520244296235	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGTGGGGTTTATGG	NA	False	NA	-4	True	AATAAA	-16	NA	140376076	140241797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319257_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.41	chr4	-	4554	4	ISM	ENSMUSG00000040964.17	ENSMUST00000105797.9	3507	18	41838	3	28401	-3	3prime_fragment	FALSE	canonical	3	215	junction_3	9.84321537348893	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTGTGGGGTTTATG	NA	False	NA	-5	True	AATAAA	-15	NA	140267291	140241798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079
ES.24886.42	chr4	-	3754	5	NNC	ENSMUSG00000040964.17	novel	3043	16	NA	NA	-81	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	98.9504295089213	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTGTGGGGTTTATG	NA	False	NA	-5	True	AATAAA	-15	NA	140295773	140241798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140265803_140295084
ES.24886.43	chr4	-	4428	28	NNC	ENSMUSG00000040964.17	novel	4531	28	NA	NA	8718	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	64.884851049745	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTGTGGGGTTTATG	NA	False	NA	-5	True	AATAAA	-15	NA	140367343	140241798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140296066_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.44	chr4	-	5425	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-7665	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	56.2522976211134	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCCTGTGGGGTTTAT	NA	False	NA	-6	True	AATAAA	-14	NA	140352041	140241799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140350829_140351930_140351971
ES.24886.46	chr4	-	4221	25	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-64	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	47.2098594928362	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCCCTGTGGGGTTTA	NA	False	NA	-7	True	AATAAA	-13	NA	140376131	140241800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140344223_140344304_140375944
ES.24886.47	chr4	-	4381	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	45.5270255910882	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGCCCTGTGGGGTTT	NA	False	NA	-8	True	AATAAA	-12	NA	140376029	140241801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344180_140344304_140375944
ES.24886.5	chr4	-	4460	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	8674	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_26	42.3527033291848	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140367387	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.50	chr4	-	4708	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	60.9024395476663	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGGCCCTGTGGGGTT	NA	False	NA	-9	True	AATAAA	-11	NA	140376050	140241802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140312832_140313066_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.52	chr4	-	6262	27	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	8718	-7	intron_retention	FALSE	canonical	3	17	junction_26	53.2667314048479	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGGCCCTGTGGGGTT	NA	False	NA	-9	True	AATAAA	-11	NA	140367343	140241802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.53	chr4	-	4343	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.122254976916	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGGCCCTGTGGGGTT	NA	False	NA	-9	True	AATAAA	-11	NA	140376040	140241802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140270286_140270324_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319257_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.54	chr4	-	4260	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-11400	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	45.0730012733452	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACGATGTATATTATAT	NA	False	NA	-91	True	NA	NA	NA	140355776	140241884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140355686
ES.24886.55	chr4	-	4275	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	7856	-89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	45.0730012733452	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACGATGTATATTATAT	NA	False	NA	-91	True	NA	NA	NA	140368205	140241884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140368100
ES.24886.56	chr4	-	5171	21	NNC	ENSMUSG00000040964.17	novel	3839	22	NA	NA	-1070	-97	intron_retention	FALSE	canonical	3	7	junction_8	60.5432696507217	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACGTATATACGATGTA	NA	False	NA	-99	True	NA	NA	NA	140312724	140241892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134
ES.24886.57	chr4	-	4397	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	579	-99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	56.7221466487205	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATACGTATATACGATG	NA	False	NA	-101	True	NA	NA	NA	140375482	140241894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140351704_140351899_140375439
ES.24886.58	chr4	-	4388	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	-98	203	-92	-203	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAACCTTTTGTTGGGGCT	NA	False	NA	50	True	CATAAA	-24	NA	140376159	140241998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.59	chr4	-	4260	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-8	-205	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_22	53.6994634341336	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAACCTTTTGTTGGGG	NA	False	NA	48	True	CATAAA	-22	NA	140376075	140242000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319257_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.6	chr4	-	4408	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	54.3202918025015	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376087	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306648_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.60	chr4	-	4273	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-96	205	-96	-205	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAACCTTTTGTTGGGG	NA	False	NA	48	True	CATAAA	-22	NA	140376163	140242000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.61	chr4	-	4364	28	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-13	-205	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	54.7729319470309	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAACCTTTTGTTGGGG	NA	False	NA	48	True	CATAAA	-22	NA	140376080	140242000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.62	chr4	-	4050	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	10	-205	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	45.3399388968666	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGAACCTTTTGTTGGGG	NA	False	NA	48	True	CATAAA	-22	NA	140376051	140242000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306648_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.64	chr4	-	4175	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	14680	-207	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	56.1318504637816	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAGAACCTTTTGTTGG	NA	False	NA	46	True	CATAAA	-20	NA	140361381	140242002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140360666_140360762_140361353
ES.24886.65	chr4	-	1393	5	NNC	ENSMUSG00000040964.17	novel	3043	16	NA	NA	26219	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.9504295089213	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAGAACCTTTTGTTGG	NA	False	NA	46	True	CATAAA	-20	NA	140269473	140242002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269367
ES.24886.69	chr4	-	4583	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-17831	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	65.3394980084788	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTAGAACCTTTTGTT	NA	False	NA	44	True	CATAAA	-18	NA	140411154	140242004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140401735_140401917_140409977_140410102_140410926
ES.24886.7	chr4	-	4649	27	NIC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_12	46.2052918406847	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376084	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.71	chr4	-	4198	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-72	-214	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_21	44.3520244296235	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGAACCTAGAACCTT	NA	False	NA	39	True	CATAAA	-13	NA	140376139	140242009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319257_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.72	chr4	-	4356	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	-83	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	48.8724158554707	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGCTGAACCTAGAACC	NA	False	NA	37	True	CATAAA	-11	NA	140376150	140242011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314202_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.73	chr4	-	4260	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	8695	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.2443253006313	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGCTGAACCTAGAACC	NA	False	NA	37	True	CATAAA	-11	NA	140367366	140242011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140270286_140270324_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.75	chr4	-	4197	28	NNC	ENSMUSG00000040964.17	novel	4493	28	NA	NA	580	-221	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	54.1711963917959	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGCCTGCTGAACCTA	NA	False	NA	32	True	CATAAA	-6	NA	140375481	140242016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375439
ES.24886.76	chr4	-	4229	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	8682	-223	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_26	42.3527033291848	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACTGCCTGCTGAACC	NA	False	NA	30	True	CATAAA	-4	NA	140367379	140242018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.78	chr4	-	5714	15	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-20	9090	intron_retention	FALSE	canonical	3	130	junction_8	27.6453487249202	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAGAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140376087	140293646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.79	chr4	-	4041	16	ISM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	-103	51871	-103	9070	5prime_fragment	FALSE	canonical	3	130	junction_9	26.8998141257519	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140376170	140293666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.8	chr4	-	4931	27	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	14723	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	44.1043846523464	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140361338	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140360666
ES.24886.80	chr4	-	5238	2	NIC	ENSMUSG00000040964.17	novel	3839	22	NA	NA	597	9047	intron_retention	FALSE	canonical	3	188	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140303808	140293689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140297714_140302594
ES.24886.81	chr4	-	3812	16	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	4	9046	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	52.9080544172834	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	140376667	140293690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140376646
ES.24886.82	chr4	-	3978	16	NNC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	8688	9046	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_15	49.1317503137115	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	140367373	140293690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140367186
ES.24886.83	chr4	-	1242	10	ISM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	33	65692	27	688	5prime_fragment	FALSE	canonical	3	130	junction_3	29.0095769627128	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCGAGCACGGAAGCCA	NA	False	NA	NA	False	AGTAAA	-15	NA	140376034	140307487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24886.84	chr4	-	2921	2	Intergenic	novelGene_20518	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140327550	140324588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140327420_140327460
ES.24886.85	chr4	-	2957	1	Intergenic	novelGene_20517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140327545	140324588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140324600_140327500
ES.24886.86	chr4	-	1995	1	Intergenic	novelGene_20519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGTTGAGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	140372172	140370177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140370200_140372200
ES.24886.87	chr4	-	610	3	Antisense	novelGene_ENSMUSG00000086159.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATAATAATA	NA	False	NA	NA	False	NA	NA	NA	140412336	140410757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_140411134_140411591_140411714_140412224
ES.24886.9	chr4	-	4579	28	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	53.9528321154549	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376139	140241795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ES.24887.1	chr4	+	159	1	Intergenic	novelGene_20520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAACCAATAA	NA	False	NA	NA	False	NA	NA	NA	140419027	140419186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140419000_140419200
ES.24888.1	chr4	+	4764	14	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-825	1	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	1232.37672907551	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTTTCATGATTCCTC	624	False	NA	29	True	AATAAA	-22	NA	140427026	140450532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428061_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.10	chr4	+	3914	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-47	-5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	1243.44524246382	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTGGCTTTCATGA	1402	False	NA	23	True	AATAAA	-16	NA	140427804	140450526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140427995_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.100	chr4	+	5482	10	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	4839	-1745	intron_retention	FALSE	canonical	3	3941	junction_8	344.75609556917	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	7220	False	NA	18	True	NA	NA	NA	140433622	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.101	chr4	+	4561	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	4951	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1331.00141880447	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTGGCTTTCATGA	7332	False	NA	23	True	AATAAA	-16	NA	140433734	140450526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434083_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.102	chr4	+	7084	10	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	5375	-1751	intron_retention	FALSE	non_canonical	0	0	junction_4	1460.42794337063	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	7756	False	NA	12	True	NA	NA	NA	140434158	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.103	chr4	+	4036	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	5625	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1330.16576360906	3901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTGGCTTTCATGA	8006	False	NA	23	True	AATAAA	-16	NA	140434408	140450526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140435150_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.104	chr4	+	6369	10	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	5691	-6	intron_retention	FALSE	canonical	3	3941	junction_8	344.75609556917	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	8072	False	NA	22	True	AATAAA	-15	NA	140434474	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.105	chr4	+	8022	9	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	5692	-6	intron_retention	FALSE	canonical	3	3941	junction_7	355.988324949007	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	8073	False	NA	22	True	AATAAA	-15	NA	140434475	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.106	chr4	+	4380	11	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	5739	-1803	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1386.13529281957	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCCTTTCTACGAGAT	8120	False	NA	29	True	ATTAAA	-17	NA	140434522	140448728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.107	chr4	+	3224	11	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-6333	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	1373.19051846421	3901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	8926	False	NA	28	True	AATAAA	-21	NA	140435328	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444503_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.109	chr4	+	5426	9	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-5519	-1748	intron_retention	FALSE	non_canonical	0	0	junction_3	1534.16426760631	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	9740	False	NA	15	True	NA	NA	NA	140436142	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140437788_140439441_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.11	chr4	+	5218	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-23	-8	intron_retention	FALSE	non_canonical	0	0	junction_8	1618.57541278246	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGCGTTGGCTTTCA	1426	False	NA	20	True	AATAAA	-13	NA	140427828	140450523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140441276_140441781_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.110	chr4	+	5571	9	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-2591	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1545.3091064169	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	NA	False	NA	22	True	AATAAA	-15	NA	140439070	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.111	chr4	+	3650	9	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-2196	-1748	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1981.29173457621	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	NA	False	NA	15	True	NA	NA	NA	140439465	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444668_140444875_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.112	chr4	+	4823	5	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-1741	2575	intron_retention	FALSE	non_canonical	0	0	junction_2	2107.76101586494	3760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTCTTTTGACAGCCT	NA	False	NA	NA	False	NA	NA	NA	140439920	140447086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935
ES.24888.113	chr4	+	3751	6	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-918	-1809	intron_retention	FALSE	non_canonical	0	0	junction_1	1901.26494734427	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCAGCCTGCCTTTCTA	NA	False	NA	23	True	ATTAAA	-11	NA	140440743	140448722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140442253_140442460_140443344_140444330_140444512_140444935_140445724_140447855_140447934_140448410
ES.24888.114	chr4	+	2458	8	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-889	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1637.88826211792	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	NA	False	NA	22	True	AATAAA	-15	NA	140440772	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410_140449398_140449711
ES.24888.116	chr4	+	2322	2	Genic_Genomic	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2868	2575	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTCTTTTGACAGCCT	NA	False	NA	NA	False	NA	NA	NA	140444556	140447086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_140444668_140444875
ES.24888.117	chr4	+	2372	4	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	16151	7	3246	-7	3prime_fragment	FALSE	canonical	3	3941	junction_2	287.305876491705	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCGTTGGCTTTCAT	NA	False	NA	21	True	AATAAA	-14	NA	140444934	140450524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.13	chr4	+	4721	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	-954	0	-22	0	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	1427	False	NA	28	True	AATAAA	-21	NA	140427829	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.14	chr4	+	3116	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	27	-1751	intron_retention	FALSE	canonical	1	1	junction_5	1626.06757285154	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	1476	False	NA	12	True	NA	NA	NA	140427878	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439141_140439337_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.15	chr4	+	6074	15	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	64	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	1809.26356790913	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTGGCTTTCATGA	1513	False	NA	23	True	AATAAA	-16	NA	140427915	140450526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.16	chr4	+	4331	15	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	67	-1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1809.26356790913	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	1516	False	NA	18	True	NA	NA	NA	140427918	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.17	chr4	+	3974	15	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	1820.12093257115	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	1520	False	NA	28	True	AATAAA	-21	NA	140427922	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445604_140445724_140447855_140447934_140448410
ES.24888.18	chr4	+	2105	14	ISM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	479	1809	-453	-1809	3prime_fragment	FALSE	canonical	3	52	junction_1	1232.37672907551	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCAGCCTGCCTTTCTA	1928	False	NA	23	True	ATTAAA	-11	NA	140428330	140448722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.19	chr4	+	4634	12	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-322	-1743	intron_retention	FALSE	canonical	3	3313	junction_2	515.138334947256	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATTTCTTTTCTCCCT	2059	False	NA	20	True	NA	NA	NA	140428461	140448788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.2	chr4	+	3235	14	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-668	-1738	intron_retention	FALSE	canonical	3	24	junction_1	1239.26178636635	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTCTCCCTGCTCT	781	False	NA	25	True	NA	NA	NA	140427183	140448793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428061_140428454_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.21	chr4	+	2102	14	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-214	-1748	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1239.01577660438	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	2167	False	NA	15	True	NA	NA	NA	140428569	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428691_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.23	chr4	+	3776	14	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-146	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1603.97556386232	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTGGCTTTCATGATTC	2235	False	NA	26	True	AATAAA	-19	NA	140428637	140450529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428691_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444508_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.26	chr4	+	3057	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	-37	747	-37	-747	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	3886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTCTGTCGCTTTCCT	2344	False	NA	12	True	NA	NA	NA	140428746	140449784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.27	chr4	+	3507	12	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-35	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1330.72286327506	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	2346	False	NA	22	True	AATAAA	-15	NA	140428748	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428962_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.3	chr4	+	2860	14	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-667	-1745	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	1232.37672907551	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	782	False	NA	18	True	NA	NA	NA	140427184	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428061_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.30	chr4	+	5286	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-23	-1748	intron_retention	FALSE	non_canonical	0	0	junction_6	1339.06759221815	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	2358	False	NA	15	True	NA	NA	NA	140428760	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140441781_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.32	chr4	+	3344	15	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-19	-1751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1818.90508105221	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	2362	False	NA	12	True	NA	NA	NA	140428764	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140441276_140442253_140442460_140442794_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.34	chr4	+	4175	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-16	-1752	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1283.77056134134	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAGTTGTATTTCT	2365	False	NA	11	True	NA	NA	NA	140428767	140448779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.38	chr4	+	6446	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	3	-1750	intron_retention	FALSE	non_canonical	0	0	junction_6	1339.06759221815	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	2384	False	NA	13	True	NA	NA	NA	140428786	140448781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.39	chr4	+	2841	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	11	-1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1295.00008580008	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	2392	False	NA	25	True	ATTAAA	-13	NA	140428794	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140436248_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.4	chr4	+	3585	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-585	-1745	intron_retention	FALSE	canonical	3	36	junction_10	1285.62115067214	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	864	False	NA	18	True	NA	NA	NA	140427266	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445604_140445724_140447855_140447934_140448410
ES.24888.41	chr4	+	1806	11	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	11	-1746	combination_of_known_splicesites	FALSE	canonical	1	41	junction_5	1362.92639566486	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTATTTCTTTTCTC	2392	False	NA	17	True	NA	NA	NA	140428794	140448785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.42	chr4	+	4227	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	11	6	11	-6	intron_retention	FALSE	canonical	3	3313	junction_2	508.095097495709	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	2392	False	NA	22	True	AATAAA	-15	NA	140428794	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855
ES.24888.43	chr4	+	1991	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	11	-1751	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	1282.74857619185	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	2392	False	NA	12	True	NA	NA	NA	140428794	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440811_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.47	chr4	+	1721	7	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1548.20427341557	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2393	False	NA	28	True	AATAAA	-21	NA	140428795	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439924_140449662
ES.24888.48	chr4	+	1698	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	19	-1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1348.61749841265	3824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	2400	False	NA	25	True	ATTAAA	-13	NA	140428802	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140439540_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.49	chr4	+	1987	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	24	-1748	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1291.77458420147	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	2405	False	NA	15	True	NA	NA	NA	140428807	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428954_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.5	chr4	+	2834	15	FSM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	-583	1748	-583	-1748	multi-exon	FALSE	canonical	3	24	junction_1	1566.2974279022	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	866	False	NA	15	True	NA	NA	NA	140427268	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.50	chr4	+	1568	11	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	25	-1748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1395.72856960084	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTGTATTTCTTTTC	2406	False	NA	15	True	NA	NA	NA	140428808	140448783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140437686_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.51	chr4	+	8174	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	25	0	intron_retention	FALSE	non_canonical	0	0	junction_6	1339.06759221815	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2406	False	NA	28	True	AATAAA	-21	NA	140428808	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.52	chr4	+	356	1	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	44	-8598	mono-exon	FALSE	NA	NA	NA	NA	NA	2970	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATCAATAAAAAAAAAAA	2425	False	NA	NA	False	NA	NA	NA	140428827	140429183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428800_140429200
ES.24888.53	chr4	+	4048	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	56	-1807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1899.25654131353	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	2437	False	NA	25	True	ATTAAA	-13	NA	140428839	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444516_140444941_140445042_140445648_140445724_140447855_140447934_140448410
ES.24888.55	chr4	+	1968	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	57	-1752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1281.37434897934	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAGTTGTATTTCT	2438	False	NA	11	True	NA	NA	NA	140428840	140448779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447944_140448410
ES.24888.58	chr4	+	1945	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	62	-1753	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1281.37434897934	3825	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTAAGTTGTATTTC	2443	False	NA	10	True	NA	NA	NA	140428845	140448778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447927_140448410
ES.24888.59	chr4	+	3590	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	62	-1807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1618.57541278246	3824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	2443	False	NA	25	True	ATTAAA	-13	NA	140428845	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140441276_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.6	chr4	+	5390	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-582	-7	intron_retention	FALSE	canonical	0	0	junction_11	1637.15478044928	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCGTTGGCTTTCAT	867	False	NA	21	True	AATAAA	-14	NA	140427269	140450524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140446109_140446226_140447855_140447934_140448410
ES.24888.60	chr4	+	1986	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	62	-1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1887.34740438852	3824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	2443	False	NA	25	True	ATTAAA	-13	NA	140428845	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429747_140430718_140430821_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440811_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.63	chr4	+	3647	14	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1245.16854684784	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2443	False	NA	28	True	AATAAA	-21	NA	140428845	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429457_140429515_140429572_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.67	chr4	+	1875	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	62	-1812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1291.77458420147	3824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATAGCCAGCCTGCCTTT	2443	False	NA	20	True	ATTAAA	-8	NA	140428845	140448719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140429475_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.69	chr4	+	5991	12	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	64	0	intron_retention	FALSE	canonical	3	3313	junction_2	515.138334947256	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2445	False	NA	28	True	AATAAA	-21	NA	140428847	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.7	chr4	+	3882	14	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-285	-6	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	1241.47625427989	3904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	1164	False	NA	22	True	AATAAA	-15	NA	140427566	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140427726_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.71	chr4	+	7694	10	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	101	-1769	intron_retention	FALSE	non_canonical	0	0	junction_4	1919.70478054425	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGTAGGTTTTTTTAT	2482	False	NA	-6	True	NA	NA	NA	140428884	140448762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428962_140435261_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.72	chr4	+	4161	12	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	102	0	intron_retention	FALSE	canonical	3	3313	junction_1	471.181177976518	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2483	False	NA	28	True	AATAAA	-21	NA	140428885	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.74	chr4	+	2183	13	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	170	-1745	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	1255.58957764868	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	2551	False	NA	18	True	NA	NA	NA	140428953	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429293_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.75	chr4	+	3770	13	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	329	1	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	1255.58957764868	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTTTCATGATTCCTC	2710	False	NA	29	True	AATAAA	-22	NA	140429112	140450532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429293_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.77	chr4	+	5874	13	NNC	ENSMUSG00000040945.14	novel	430	3	NA	NA	366	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1660.31326528727	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTGGCTTTCATGATTC	2747	False	NA	26	True	AATAAA	-19	NA	140429149	140450529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429293_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.78	chr4	+	2080	12	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	436	1747	436	-1747	3prime_fragment	FALSE	canonical	3	3313	junction_1	471.181177976518	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTGTATTTCTTTTCT	2817	False	NA	16	True	NA	NA	NA	140429219	140448784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.8	chr4	+	3224	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	-1202	1745	-270	-1745	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	1179	False	NA	18	True	NA	NA	NA	140427581	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.81	chr4	+	6262	11	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	626	-1807	intron_retention	FALSE	non_canonical	0	0	junction_5	1401.36824567991	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	3007	False	NA	25	True	ATTAAA	-13	NA	140429409	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.82	chr4	+	7554	10	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	646	-5	intron_retention	FALSE	canonical	3	3313	junction_1	513.768382267033	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGTTGGCTTTCATGA	3027	False	NA	23	True	AATAAA	-16	NA	140429429	140450526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140429747_140435261_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.83	chr4	+	1886	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	671	-1752	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	1338.60988089254	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAGTTGTATTTCT	3052	False	NA	11	True	NA	NA	NA	140429454	140448779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445604_140445724_140447855_140447934_140448410
ES.24888.84	chr4	+	1764	12	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	692	-1801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1295.99600805425	3821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTTTCTACGAGATAG	3073	False	NA	31	True	ATTAAA	-19	NA	140429475	140448730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443338_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.85	chr4	+	4332	10	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	791	-1751	intron_retention	FALSE	canonical	3	3313	junction_1	510.98034559095	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	3172	False	NA	12	True	NA	NA	NA	140429574	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140429747_140435261_140437788_140439441_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.87	chr4	+	5398	13	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	1324	-1766	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1701.32730047258	3821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGGTTTTTTTATTTT	3705	False	NA	-3	True	NA	NA	NA	140430107	140448765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434085_140434235_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.88	chr4	+	3827	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	1332	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1330.72286327506	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	3713	False	NA	28	True	AATAAA	-21	NA	140430115	140450531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140430643_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.89	chr4	+	5693	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2167	-1806	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1330.16576360906	3821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGCCTTTCTACGA	4548	False	NA	26	True	ATTAAA	-14	NA	140430950	140448725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140435150_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.9	chr4	+	4172	15	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	-175	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1824.90628358761	3904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	1274	False	NA	22	True	AATAAA	-15	NA	140427676	140450525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445046_140445650_140445724_140447855_140447934_140448410
ES.24888.90	chr4	+	3381	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2397	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	3901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTGGCTTTCATGATTCC	4778	False	NA	27	True	AATAAA	-20	NA	140431180	140450530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.91	chr4	+	1580	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2403	-1751	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1330.72286327506	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	4784	False	NA	12	True	NA	NA	NA	140431186	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140431218_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.92	chr4	+	3663	12	NNC	ENSMUSG00000040945.14	novel	430	3	NA	NA	2408	-1807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1757.0598516596	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCCTGCCTTTCTACG	4789	False	NA	25	True	ATTAAA	-13	NA	140431191	140448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140431218_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.93	chr4	+	1624	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2410	-1745	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	4791	False	NA	18	True	NA	NA	NA	140431193	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.94	chr4	+	5343	11	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	2690	1745	2690	-1745	3prime_fragment	FALSE	canonical	3	3941	junction_9	345.088046735902	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	5071	False	NA	18	True	NA	NA	NA	140431473	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.95	chr4	+	4928	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2842	-1745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1331.00141880447	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTATTTCTTTTCTCC	5223	False	NA	18	True	NA	NA	NA	140431625	140448786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434085_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.97	chr4	+	6177	11	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	3875	-1751	intron_retention	FALSE	non_canonical	0	0	junction_1	1395.72856960084	3822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGTTGTATTTCTT	6256	False	NA	12	True	NA	NA	NA	140432658	140448780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434085_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.98	chr4	+	9761	10	NNC	ENSMUSG00000040945.14	novel	430	3	NA	NA	4032	-1808	intron_retention	FALSE	non_canonical	0	0	junction_1	1919.90943716457	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGCCTGCCTTTCTAC	6413	False	NA	24	True	ATTAAA	-12	NA	140432815	140448723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434085_140439574_140439896_140439986_140440709_140442253_140442460_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24888.99	chr4	+	4134	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	4636	-745	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1331.00141880447	3883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTGTCGCTTTCCTCC	7017	False	NA	14	True	NA	NA	NA	140433419	140449786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140433823_140434085_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ES.24889.1	chr4	+	4912	1	Antisense	novelGene_ENSMUSG00000040935.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTTCCCAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	140450688	140455600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_140450700_140455600
ES.2489.1	chr10	+	5384	1	Antisense	novelGene_ENSMUSG00000039166.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	25093244	25098628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_25093200_25098600
ES.24890.1	chr4	-	827	5	ISM	ENSMUSG00000040935.13	ENSMUST00000038749.11	2333	16	11502	5	1902	-5	3prime_fragment	FALSE	canonical	1	2	junction_4	8.15475321515004	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTTTTTACGCCGC	NA	False	NA	NA	False	AATAAA	-14	NA	140458452	140454670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140455121_140456177_140456340_140457019_140457091_140458222_140458347_140458432
ES.24891.1	chr4	+	176	1	Intergenic	novelGene_20521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGCTACATACA	NA	False	NA	NA	False	NA	NA	NA	140465943	140466119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140465900_140466100
ES.24892.1	chr4	+	940	1	Intergenic	novelGene_20522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCCCACTGGAGGCAAT	NA	False	NA	NA	False	NA	NA	NA	140481161	140482101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140481200_140482100
ES.24893.1	chr4	-	1280	5	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	7345	414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.8567278340919	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCCTGAGTTCAAATC	NA	False	NA	NA	False	NA	NA	NA	140477891	140472761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475536_140475768_140475837_140477659_140477766_140477831
ES.24893.11	chr4	-	2582	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	4096	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.5492056670828	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140497451	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496917_140497314
ES.24893.12	chr4	-	2692	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	-78	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.9056454579332	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140501625	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490795_140492881_140492949_140496621_140496917_140501399
ES.24893.13	chr4	-	2526	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	-534	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.5492056670828	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140502081	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501886
ES.24893.15	chr4	-	2373	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-57	0	-57	0	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTTTACCACGGAG	NA	False	NA	-11	True	AATAAA	-14	NA	140501604	140473175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ES.24893.16	chr4	-	1784	10	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-68	10003	-68	35	5prime_fragment	FALSE	canonical	3	81	junction_8	13.5810325249756	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTCAGATGCAAGCTC	NA	False	NA	NA	False	AATAAA	-27	NA	140501615	140483178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ES.24893.2	chr4	-	2772	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-88	-368	-88	368	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	140501635	140472807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ES.24893.3	chr4	-	2444	5	ISM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	22373	-356	6062	356	3prime_fragment	FALSE	canonical	3	76	junction_4	19.8415599185145	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAAAGGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	140479174	140472819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891
ES.24893.4	chr4	-	2618	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-113	-189	-113	189	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCTGGCAAGATGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	140501660	140472986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ES.24893.5	chr4	-	2583	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	-57	189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.4524852752512	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCTGGCAAGATGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	140501604	140472986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490795_140492881_140492949_140496621_140496803_140501399
ES.24893.7	chr4	-	2409	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	34	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	29.5115796482217	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140501513	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496657_140496803_140501399
ES.24893.8	chr4	-	2654	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	-58	163	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	36.8996236054275	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140501605	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477766_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496917_140501399
ES.24893.9	chr4	-	3797	16	NNC	ENSMUSG00000025330.7	novel	2316	16	NA	NA	-79	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.077696200756	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140501626	140473012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478894_140479455_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492885_140492949_140496621_140496803_140501399
ES.24894.1	chr4	-	3119	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	-47	0	-47	0	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTTGGCCTTTC	NA	False	NA	0	True	AATAAA	-14	NA	140538006	140512675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
ES.24894.2	chr4	-	1459	3	NNC	ENSMUSG00000025328.10	novel	3310	15	NA	NA	14841	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACAGAAGCACA	3341	False	NA	-23	True	NA	NA	NA	140516492	140512698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140513946_140516147_140516274_140516406
ES.24894.3	chr4	-	4308	14	NIC	ENSMUSG00000025328.10	novel	3072	16	NA	NA	7	-19	intron_retention	FALSE	canonical	0	0	junction_7	7.02320751416205	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACAGAAGCACA	NA	False	NA	-23	True	NA	NA	NA	140537952	140512698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140513946_140516147_140516274_140517023_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
ES.24895.1	chr4	+	3161	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3411	1921	intron_retention	FALSE	canonical	3	10	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTGTGTGAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	140541714	140546743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140542139_140544006
ES.24895.2	chr4	+	1044	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3413	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTTAAATTGTATGT	NA	False	NA	NA	False	NA	NA	NA	140541716	140544807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140541960_140544006
ES.24895.3	chr4	+	1218	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3427	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATGTGTATGGGTG	NA	False	NA	NA	False	NA	NA	NA	140541730	140544816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140542139_140544006
ES.24896.1	chr4	+	179	1	Intergenic	novelGene_20523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140564444	140564623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140564400_140564600
ES.24897.1	chr4	-	158	1	Intergenic	novelGene_20524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9243	False	NA	NA	False	NA	NA	NA	140601343	140601185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140601200_140601300
ES.24898.1	chr4	+	180	1	Intergenic	novelGene_20525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	140620442	140620622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140620400_140620600
ES.24899.1	chr4	+	4776	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	-3	1	-3	-1	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGGCTCTGGGTGACATT	NA	False	NA	7	True	AATAAA	-32	NA	140633651	140679896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
ES.24899.3	chr4	+	3522	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	39	1213	39	-1213	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATTCTACTTTGAAAG	NA	False	NA	NA	False	AATAAA	-32	NA	140633693	140678684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
ES.24899.4	chr4	+	2310	15	ISM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	11298	2189	-6517	662	3prime_fragment	FALSE	canonical	3	23	junction_6	9.35387074740632	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACACGTTGCGTCCCCAC	NA	False	NA	NA	False	NA	NA	NA	140644952	140677708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
ES.249.1	chr1	+	3344	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-60	-5	-44	5	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGACTTCTGTCG	NA	False	NA	23	True	ATTAAA	-23	NA	34889012	34918666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.10	chr1	+	3267	8	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	96.2789315118382	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCGTGTCTCATTGTG	NA	False	NA	13	True	ATTAAA	-13	NA	34889073	34918656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34900953_34900993_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.12	chr1	+	3241	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8152	0	intron_retention	FALSE	canonical	0	0	junction_1	97.0125176017434	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34899069	34918661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34899104_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.13	chr1	+	1021	8	NNC	ENSMUSG00000026123.12	novel	5176	7	NA	NA	8615	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	85.0965837823621	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTAATAATTGTGACTG	NA	False	NA	NA	False	TTTAAA	-19	NA	34899532	34916250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34899758_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.14	chr1	+	3426	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8618	0	intron_retention	FALSE	canonical	3	35	junction_1	85.0965837823621	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTCTCATTGTGAC	NA	False	NA	15	True	ATTAAA	-15	NA	34899535	34918658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34899758_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.15	chr1	+	3314	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8856	-1	intron_retention	FALSE	canonical	3	27	junction_1	87.8121836184293	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGTGTCTCATTGTGA	NA	False	NA	14	True	ATTAAA	-14	NA	34899773	34918657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34899885_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.16	chr1	+	3620	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	9065	-2	intron_retention	FALSE	canonical	0	0	junction_1	97.0125176017434	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCGTGTCTCATTGTG	NA	False	NA	13	True	ATTAAA	-13	NA	34899982	34918656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34900401_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.17	chr1	+	3257	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	9879	0	intron_retention	FALSE	non_canonical	0	0	junction_1	97.0125176017434	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34900796	34918661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34900847_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.18	chr1	+	3276	7	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	11812	0	9967	0	3prime_fragment	FALSE	canonical	3	235	junction_3	22.6764684689266	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34900884	34918661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.19	chr1	+	5307	1	NIC	ENSMUSG00000026123.12	novel	5176	7	NA	NA	-11421	-2415	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAACAAATGGAAGA	NA	False	NA	NA	False	NA	NA	NA	34905315	34910622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34905300_34910600
ES.249.2	chr1	+	897	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	-36	2418	-20	-2415	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGGTAATCTAATAATT	NA	False	NA	NA	False	TTTAAA	-12	NA	34889036	34916243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.20	chr1	+	2179	1	ISM	ENSMUSG00000026123.12	ENSMUST00000156687.8	5176	7	21802	0	-5878	0	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34910858	34913037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_34910900_34913000
ES.249.21	chr1	+	2855	1	NIC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	-933	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTCTCATTGTGAC	NA	False	NA	15	True	ATTAAA	-15	NA	34915803	34918658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34915800_34918700
ES.249.3	chr1	+	3297	8	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_3	96.0025509865148	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGTGTCTCATTGTGA	NA	False	NA	14	True	ATTAAA	-14	NA	34889042	34918657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34900953_34900999_34902086_34902240_34902559_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.4	chr1	+	3419	9	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_2	118.410039692587	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34889044	34918661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34891305_34891418_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.5	chr1	+	2807	7	FSM	ENSMUSG00000026123.12	ENSMUST00000156687.8	5176	7	-12	2381	-12	-2381	multi-exon	FALSE	canonical	3	235	junction_4	21.2733531808118	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTTTATGAATACTTG	NA	False	NA	NA	False	AATAAA	-29	NA	34889044	34910656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380
ES.249.6	chr1	+	3300	8	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_5	98.1805916229301	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCGTGTCTCATTGTG	NA	False	NA	13	True	ATTAAA	-13	NA	34889064	34918656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905203_34905312_34908380_34908487_34915991
ES.249.7	chr1	+	3339	9	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	111.712731481242	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTCTCATTGTGAC	NA	False	NA	15	True	ATTAAA	-15	NA	34889065	34918658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34899701_34899758_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.249.8	chr1	+	2899	5	NNC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_4	125.21855892798	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTCTCATTGTGAC	NA	False	NA	15	True	ATTAAA	-15	NA	34889066	34918658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902624_34916107
ES.249.9	chr1	+	3587	7	NIC	ENSMUSG00000026123.12	novel	3279	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	235	junction_3	20.9973543306982	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTCTCATTGTGAC	NA	False	NA	15	True	ATTAAA	-15	NA	34889073	34918658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_34889145_34900953_34900999_34902086_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ES.2490.1	chr10	+	2765	1	Intergenic	novelGene_1887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATTTGACTGTAACAT	9325	False	NA	NA	False	NA	NA	NA	25137914	25140679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_25137900_25140700
ES.24900.1	chr4	-	1643	4	Antisense	novelGene_ENSMUSG00000028927.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGTGACTCAAGAGTATT	5650	False	NA	NA	False	ATTAAA	-24	NA	140660252	140656498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_140657770_140657865_140657970_140659377_140659613_140660219
ES.24901.1	chr4	+	158	1	Intergenic	novelGene_20526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	140681935	140682093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140681900_140682100
ES.24902.1	chr4	+	992	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-1170	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1124.30457417472	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140687343	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140687477_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ES.24902.10	chr4	+	1032	9	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1354.66333455955	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688683	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140703943_140704007_140704688_140704812_140706335
ES.24902.11	chr4	+	2120	5	FSM	ENSMUSG00000009863.15	ENSMUST00000125780.2	1065	5	-22	-1033	-20	1033	multi-exon	FALSE	canonical	3	2820	junction_2	248.862788500009	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCATTTCTCTG	NA	False	NA	NA	False	AATATA	-16	NA	140688691	140702641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974
ES.24902.13	chr4	+	954	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_1	1023.38288563579	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688692	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ES.24902.14	chr4	+	2114	7	NIC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	2820	junction_2	217.490038086039	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688699	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140704812_140706335
ES.24902.15	chr4	+	999	6	FSM	ENSMUSG00000009863.15	ENSMUST00000129181.8	1232	6	-11	244	-11	-244	multi-exon	FALSE	canonical	3	2820	junction_2	227.940694041235	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTTCGGATATGTG	NA	False	NA	NA	False	NA	NA	NA	140688700	140703863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425
ES.24902.16	chr4	+	935	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-8	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1108.68734666409	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688703	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701085_140703432_140703528_140704688_140704812_140706335
ES.24902.17	chr4	+	3854	7	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-4	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	1163.75971173893	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAATAGGCGTTACTC	NA	False	NA	NA	False	AATAAA	-6	NA	140688707	140706496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140701409_140701472_140703528_140704688_140704812_140706335
ES.24902.18	chr4	+	3272	7	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	293	junction_1	1084.36920987887	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688708	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140703528_140704688_140704812_140706335
ES.24902.19	chr4	+	3287	7	NIC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-3	6	intron_retention	FALSE	canonical	3	2820	junction_2	217.107052446995	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCTCCATTATTACCAA	NA	False	NA	NA	False	AATAAA	-20	NA	140688708	140706510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140703528_140704688_140704812_140706335
ES.24902.2	chr4	+	996	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-1168	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1124.30457417472	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140687345	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140687477_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ES.24902.21	chr4	+	978	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1108.34322025154	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688721	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701139_140703425_140703528_140704688_140704812_140706335
ES.24902.22	chr4	+	4036	4	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	11526	3	intron_retention	FALSE	non_canonical	0	0	junction_2	1487.96064762778	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTACTCTCCATTATTAC	247	False	NA	NA	False	AATAAA	-17	NA	140700239	140706507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140700331_140700974_140701410_140701473_140704812_140706335
ES.24902.3	chr4	+	1027	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1124.30457417472	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688470	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688639_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ES.24902.4	chr4	+	1172	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	-25	-5	-25	5	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTCTCCATTATTACCA	NA	False	NA	NA	False	AATAAA	-19	NA	140688488	140706509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ES.24902.6	chr4	+	5114	6	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	94	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	1448.42653938679	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGCGTTACTCTCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	140688607	140706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693811_140693940_140698447_140698534_140700193_140701410_140701473_140704812_140706335
ES.24902.7	chr4	+	903	7	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1171.00668942012	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTCTCCATTATTACCA	NA	False	NA	NA	False	AATAAA	-19	NA	140688680	140706509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701117_140704688_140704812_140706335
ES.24902.8	chr4	+	2067	6	NNC	ENSMUSG00000009863.15	novel	1065	5	NA	NA	-31	1039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1503.4633883138	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATTTCTCTGTGTGTG	NA	False	NA	NA	False	AATATA	-22	NA	140688680	140702647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140688788_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140701410_140701473
ES.24902.9	chr4	+	3957	6	NIC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	-31	4	intron_retention	FALSE	canonical	3	2820	junction_2	217.763541484795	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTCTCCATTATTACC	NA	False	NA	NA	False	AATAAA	-18	NA	140688680	140706508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140703528_140704688_140704812_140706335
ES.24903.1	chr4	+	3894	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	-12	0	-12	0	multi-exon	FALSE	canonical	3	40	junction_19	21.6883068279021	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1390	False	NA	12	True	AATAAA	-17	NA	140714171	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ES.24903.10	chr4	+	6059	29	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	-5	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	26.8640521127839	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1424	False	NA	11	True	AATAAA	-16	NA	140714205	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140725708_140725909_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.11	chr4	+	3754	28	NIC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	28.7431270487002	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1424	False	NA	11	True	AATAAA	-16	NA	140714205	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ES.24903.12	chr4	+	3915	29	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6637910437981	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTCGGCACTGGTCT	1424	False	NA	9	True	AATAAA	-14	NA	140714205	140734638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719446_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731690_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.14	chr4	+	4020	28	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_23	26.5310336700147	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1430	False	NA	11	True	AATAAA	-16	NA	140714211	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732394_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
ES.24903.17	chr4	+	4293	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	31	-368	4	368	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACATTGGTTGTTTGTCC	1433	False	NA	NA	False	NA	NA	NA	140714214	140735009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.18	chr4	+	3941	29	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	26.834598250492	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1434	False	NA	11	True	AATAAA	-16	NA	140714215	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729916_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.19	chr4	+	4058	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	5	-1	intron_retention	FALSE	canonical	3	40	junction_19	18.6927360582743	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1434	False	NA	11	True	AATAAA	-16	NA	140714215	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.2	chr4	+	4199	28	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	27.2664543644325	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1404	False	NA	12	True	AATAAA	-17	NA	140714185	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719446_140719538_140719648_140719832_140721106_140721166_140721258_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.20	chr4	+	3472	27	NIC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_25	27.1751115248959	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTCGGCACTGGTCTT	1434	False	NA	10	True	AATAAA	-15	NA	140714215	140734639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140734063_140734160_140734251
ES.24903.23	chr4	+	6599	20	NIC	ENSMUSG00000036622.16	novel	4266	26	NA	NA	17	-1	intron_retention	FALSE	canonical	3	40	junction_13	20.9486907807949	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1446	False	NA	11	True	AATAAA	-16	NA	140714227	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140734160_140734251
ES.24903.24	chr4	+	5519	25	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	18	-6	intron_retention	FALSE	canonical	3	40	junction_18	19.3821223468088	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGTGTCGGCACTGG	1447	False	NA	6	True	AATAAA	-11	NA	140714228	140734635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140734160_140734251
ES.24903.25	chr4	+	4158	27	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	19	-1	intron_retention	FALSE	canonical	3	11	junction_5	25.9755517735587	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1448	False	NA	11	True	AATAAA	-16	NA	140714229	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
ES.24903.26	chr4	+	4023	28	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	21	2	intron_retention	FALSE	canonical	0	0	junction_27	32.4917632276336	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCACTGGTCTTGTCT	1450	False	NA	14	True	AATAAA	-19	NA	140714231	140734643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729994_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734253
ES.24903.27	chr4	+	3699	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.8736310143558	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1451	False	NA	11	True	AATAAA	-16	NA	140714232	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.28	chr4	+	3435	27	ISM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	50	738	23	-131	5prime_fragment	FALSE	canonical	3	40	junction_19	18.2567568751307	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTGGTTGTGTGCG	1452	False	NA	NA	False	NA	NA	NA	140714233	140733903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662
ES.24903.29	chr4	+	5444	25	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_11	28.2664652115463	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTCGGCACTGGTCT	1452	False	NA	9	True	AATAAA	-14	NA	140714233	140734638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727680_140727853_140727901_140727995_140728185_140729194_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.30	chr4	+	7232	22	NIC	ENSMUSG00000036622.16	novel	4266	26	NA	NA	23	-1	intron_retention	FALSE	canonical	3	40	junction_15	19.8142164771453	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1452	False	NA	11	True	AATAAA	-16	NA	140714233	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140734160_140734251
ES.24903.31	chr4	+	1830	15	NNC	ENSMUSG00000036622.16	novel	4266	26	NA	NA	23	155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	28.6200479184984	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTGTTGAAGAACCA	1452	False	NA	NA	False	GATAAA	-13	NA	140714233	140728339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722632_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995
ES.24903.32	chr4	+	3678	28	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	31.9331864219925	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	1452	False	NA	11	True	AATAAA	-16	NA	140714233	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733662_140733815_140733989_140734160_140734251
ES.24903.34	chr4	+	3901	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	15	0	intron_retention	FALSE	canonical	3	40	junction_18	18.9645543313745	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	16	False	NA	12	True	AATAAA	-17	NA	140714315	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.37	chr4	+	1956	12	NIC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	1820	-1	intron_retention	FALSE	canonical	3	40	junction_2	30.8793975019372	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	8661	False	NA	11	True	AATAAA	-16	NA	140729841	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ES.24903.38	chr4	+	2181	2	ISM	ENSMUSG00000036622.16	ENSMUST00000137630.3	877	5	621	-606	621	-1	intron_retention	FALSE	canonical	3	103	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	NA	False	NA	11	True	AATAAA	-16	NA	140732348	140734640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140732466_140732576
ES.24903.4	chr4	+	5101	24	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	9	0	intron_retention	FALSE	canonical	3	40	junction_17	19.2872035111797	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1411	False	NA	12	True	AATAAA	-17	NA	140714192	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
ES.24903.6	chr4	+	3879	29	NNC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	33.116368725315	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTCGGCACTGGTCT	1417	False	NA	9	True	AATAAA	-14	NA	140714198	140734638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729916_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ES.24903.7	chr4	+	4883	26	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	-12	2	intron_retention	FALSE	canonical	3	40	junction_19	19.0066935577969	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCACTGGTCTTGTCT	1417	False	NA	14	True	AATAAA	-19	NA	140714198	140734643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140734160_140734251
ES.24903.8	chr4	+	3940	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	16	0	-11	0	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1418	False	NA	12	True	AATAAA	-17	NA	140714199	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ES.24903.9	chr4	+	4115	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	-11	0	intron_retention	FALSE	canonical	3	40	junction_19	18.4710502737861	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1418	False	NA	12	True	AATAAA	-17	NA	140714199	140734641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
ES.24904.1	chr4	-	6942	35	FSM	ENSMUSG00000040860.17	ENSMUST00000168157.8	6244	35	0	-698	0	695	multi-exon	TRUE	canonical	2	5	junction_32	18.8695210201375	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGTCCATGCCTGG	NA	False	NA	NA	False	TATAAA	-2	NA	140785510	140743252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140785372
ES.24904.11	chr4	-	6361	36	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	19.1062763488433	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140785510	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140780260_140780403_140785372
ES.24904.12	chr4	-	6488	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.6861482044954	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140787858	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746129_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ES.24904.13	chr4	-	4678	7	NIC	ENSMUSG00000040860.17	novel	3407	13	NA	NA	-1485	-1	intron_retention	FALSE	canonical	3	74	junction_4	12.5088857306405	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140751342	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140747801_140748964_140749129_140749354_140749476_140749578
ES.24904.14	chr4	-	3829	20	NNC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-5327	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.3376755737819	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140761813	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749087_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669
ES.24904.15	chr4	-	6468	36	NNC	ENSMUSG00000040860.17	novel	6273	36	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.567613442456	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140787860	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747461_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768545_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ES.24904.16	chr4	-	4078	15	NNC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-1093	-1	intron_retention	FALSE	canonical	0	0	junction_5	24.0107331442097	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140757579	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747461_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459
ES.24904.17	chr4	-	6484	37	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	53	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	20.2818679284396	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140787803	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.18	chr4	-	4549	24	NIC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-11922	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.6242832263605	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	5796	False	NA	NA	False	NA	NA	NA	140768408	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270
ES.24904.19	chr4	-	4001	16	NIC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-1747	-1	intron_retention	FALSE	canonical	3	61	junction_14	12.5209158344481	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140758233	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202
ES.24904.2	chr4	-	6664	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	53	15	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_37	17.8135379120419	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTTCCTCTATCTGGG	NA	False	NA	NA	False	NA	NA	NA	140787803	140743932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.20	chr4	-	6550	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.6766118848276	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTCCACTCAAAT	NA	False	NA	NA	False	NA	NA	NA	140787801	140743948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749653_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.22	chr4	-	6401	37	NNC	ENSMUSG00000040860.17	novel	6273	36	NA	NA	84	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	25.6498862895465	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCTGTCCACTCAAA	NA	False	NA	NA	False	NA	NA	NA	140787772	140743949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770331_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774113_140774167_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.23	chr4	-	5596	14	NIC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-3669	0	intron_retention	FALSE	canonical	3	61	junction_11	14.2421991520408	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	False	NA	NA	False	NA	NA	NA	140760155	140743950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112
ES.24904.24	chr4	-	5520	4	NIC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	-1486	0	intron_retention	FALSE	canonical	2	4	junction_2	40.9254063985795	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	False	NA	NA	False	NA	NA	NA	140751343	140743950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140745345_140745560_140747801_140749354_140749476_140749578
ES.24904.26	chr4	-	6575	38	NIC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_37	17.566278538987	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	False	NA	NA	False	NA	NA	NA	140787896	140743950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ES.24904.3	chr4	-	6581	37	FSM	ENSMUSG00000040860.17	ENSMUST00000102491.10	6582	37	11	-10	11	10	multi-exon	FALSE	canonical	2	3	junction_36	18.7163690158055	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAAATGCTTCCTCTAT	NA	False	NA	NA	False	NA	NA	NA	140781022	140743937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140780830
ES.24904.30	chr4	-	6458	36	NNC	ENSMUSG00000040860.17	novel	6273	36	NA	NA	-1147	-36	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_35	21.6052525737495	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGTTTGTGCTTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	140786657	140743986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140785372_140785509_140786405
ES.24904.31	chr4	-	6422	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-15	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.472968513067	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCGTTTGTGCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	140787876	140743987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749653_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ES.24904.32	chr4	-	5609	31	NNC	ENSMUSG00000040860.17	novel	6248	35	NA	NA	7214	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.4239782826189	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCGTTTGTGCTTTTTGT	446	False	NA	NA	False	NA	NA	NA	140773758	140743987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761660_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702
ES.24904.34	chr4	-	6653	39	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-2	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_38	21.0472361507274	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCGTTTGTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	140787858	140743988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140786501_140786656_140787833
ES.24904.35	chr4	-	6659	39	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	52	-40	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_37	21.2782808388522	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGAGCGTTTGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	140787804	140743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140786603_140786656_140787669
ES.24904.36	chr4	-	6198	35	NNC	ENSMUSG00000040860.17	novel	6273	36	NA	NA	49	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	23.7941176470588	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGAGCGTTTGTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	140787807	140743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140785372_140785509_140787669
ES.24904.37	chr4	-	6664	39	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	-14	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.4799525498914	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGAGAGCGTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	140787875	140743994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749653_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140786405_140786656_140787833
ES.24904.38	chr4	-	6561	39	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	0	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	22.8043588193888	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGAGAGCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	140787856	140743995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140775477_140775549_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ES.24904.39	chr4	-	6507	38	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	75	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.004345765988	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGAGAGCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	140787781	140743995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745236_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.4	chr4	-	6774	39	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	86	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_38	20.9670794593008	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCCACTCAAATGCTTC	NA	False	NA	NA	False	NA	NA	NA	140787770	140743943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140786501_140786656_140787669
ES.24904.40	chr4	-	6469	37	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	35	-45	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	20.9456969858303	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGAGAGCGTTTGTG	NA	False	NA	NA	False	NA	NA	NA	140787821	140743995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.41	chr4	-	6437	37	NNC	ENSMUSG00000040860.17	novel	6582	37	NA	NA	0	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	19.1370947393205	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGAGAGCGTTTGT	NA	False	NA	NA	False	NA	NA	NA	140785510	140743996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774113_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140785372
ES.24904.43	chr4	-	1953	2	ISM	ENSMUSG00000040860.17	ENSMUST00000040222.14	6248	35	19223	14844	-5263	-9946	intron_retention	FALSE	canonical	3	65	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAACATTCGGGTTG	NA	False	NA	NA	False	NA	NA	NA	140761749	140758794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140760283_140761284
ES.24904.44	chr4	-	4834	3	NNC	ENSMUSG00000040860.17	novel	542	5	NA	NA	53	-4467	intron_retention	FALSE	non_canonical	0	0	junction_1	6	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGAGCTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	140787803	140778820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140783362_140785349_140785509_140787669
ES.24904.5	chr4	-	6429	37	NNC	ENSMUSG00000040860.17	novel	6273	36	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_33	20.8679712052279	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140787769	140743947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140778351_140778507_140780260_140780403_140785372_140785509_140787669
ES.24904.8	chr4	-	6269	35	FSM	ENSMUSG00000040860.17	ENSMUST00000040222.14	6248	35	-18	-3	-18	0	multi-exon	FALSE	canonical	2	3	junction_34	21.7150466864604	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140780990	140743947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140780830
ES.24905.1	chr4	-	4174	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	19	7	intron_retention	TRUE	canonical	3	431	junction_1	26.7810048770061	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATGTTTTTGGCAGCG	8519	False	NA	-3	True	AATAAA	-29	NA	140805634	140793815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.10	chr4	-	1896	8	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-21	-4	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_4	222.571795341711	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCTCAGATGGATATGT	8527	False	NA	-14	True	AATAAA	-18	NA	140805626	140793826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140805523
ES.24905.11	chr4	-	3820	1	NIC	ENSMUSG00000028923.15	novel	1874	8	NA	NA	1437	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCTCAGATGGATATG	NA	False	NA	-15	True	AATAAA	-17	NA	140797647	140793827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140793800_140797600
ES.24905.12	chr4	-	3632	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	362	junction_2	49.1101369938586	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCTCAGATGGATATG	8530	False	NA	-15	True	AATAAA	-17	NA	140805623	140793827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.13	chr4	-	1989	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	200.893628569947	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8511	False	NA	-16	True	AATAAA	-16	NA	140805642	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.14	chr4	-	2075	10	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	220.312404452304	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8511	False	NA	-16	True	AATAAA	-16	NA	140805642	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798165_140798252_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.15	chr4	-	2009	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	13	-6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	200.893628569947	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8513	False	NA	-16	True	AATAAA	-16	NA	140805640	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.16	chr4	-	2805	8	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	22	junction_3	159.292056247867	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8528	False	NA	-16	True	AATAAA	-16	NA	140805625	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.17	chr4	-	6484	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	15	-6	intron_retention	FALSE	canonical	0	0	junction_3	174.829122923563	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8515	False	NA	-16	True	AATAAA	-16	NA	140805638	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270
ES.24905.19	chr4	-	1769	10	NNC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	218.790502423248	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8511	False	NA	-16	True	AATAAA	-16	NA	140805642	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140794514_140794733_140794924_140795505_140795591_140797366_140797545_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.2	chr4	-	1899	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	11	-4	-4	4	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGATATGTTTTTGGCA	8496	False	NA	-6	True	AATAAA	-26	NA	140805657	140793818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.20	chr4	-	2097	10	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	11	-6	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	220.312404452304	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	8511	False	NA	-16	True	AATAAA	-16	NA	140805642	140793828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798165_140798252_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.21	chr4	-	5227	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-16	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	222.866972654092	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACATCTCAGATGGATA	8532	False	NA	-17	True	AATAAA	-15	NA	140805621	140793829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798165_140798252_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270
ES.24905.22	chr4	-	2451	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	15	-7	intron_retention	FALSE	canonical	3	362	junction_2	48.1020327590795	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACATCTCAGATGGATA	8515	False	NA	-17	True	AATAAA	-15	NA	140805638	140793829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.23	chr4	-	3439	5	NIC	ENSMUSG00000028923.15	novel	1008	6	NA	NA	115	-8	intron_retention	FALSE	canonical	0	0	junction_3	214.216012473391	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCACATCTCAGATGGAT	9746	False	NA	-18	True	AATAAA	-14	NA	140800901	140793830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140797545_140798891_140799007_140799839_140799949_140800818
ES.24905.24	chr4	-	3717	6	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-21	-8	intron_retention	FALSE	canonical	3	362	junction_2	52.4038166548964	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCACATCTCAGATGGAT	8527	False	NA	-18	True	AATAAA	-14	NA	140805626	140793830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140797545_140799839_140799949_140800818_140801091_140802270_140802372_140805523
ES.24905.25	chr4	-	1704	10	NNC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	212.7288890746	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCACATCTCAGATGGA	8532	False	NA	-19	True	AATAAA	-13	NA	140805621	140793831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140794514_140794733_140794924_140795505_140795591_140797121_140797196_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.26	chr4	-	3419	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-23	93	intron_retention	FALSE	canonical	3	431	junction_1	26.7810048770061	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGATTCAATTTGTGGC	8525	False	NA	-6	True	ATTAAA	-19	NA	140805628	140794564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.27	chr4	-	4937	4	NIC	ENSMUSG00000028923.15	novel	621	7	NA	NA	-23	92	intron_retention	FALSE	canonical	3	431	junction_1	19.9555060627944	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGATTCAATTTGTGG	9608	False	NA	-7	True	ATTAAA	-18	NA	140801039	140794565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140799949_140800818_140800901_140800985
ES.24905.28	chr4	-	1236	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-21	92	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	200.893628569947	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGATTCAATTTGTGG	8527	False	NA	-7	True	ATTAAA	-18	NA	140805626	140794565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.3	chr4	-	5031	7	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	27	0	12	0	intron_retention	FALSE	canonical	3	362	junction_3	44.5795169706148	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8512	False	NA	-10	True	AATAAA	-22	NA	140805641	140793822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270
ES.24905.30	chr4	-	4093	8	NNC	ENSMUSG00000028923.15	novel	1874	8	NA	NA	-21	90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	199.202286684687	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGATTCAATTTGT	8527	False	NA	-9	True	ATTAAA	-16	NA	140805626	140794567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801074_140802270_140803712_140803872
ES.24905.4	chr4	-	4672	8	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	7	junction_3	210.444330706557	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8529	False	NA	-10	True	AATAAA	-22	NA	140805624	140793822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140797545_140798165_140798252_140798891_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.5	chr4	-	3852	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_4	226.774357842768	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGATGGATATGTTTT	8515	False	NA	-11	True	AATAAA	-21	NA	140805638	140793823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140797545_140798165_140798252_140798891_140799007_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.6	chr4	-	5941	6	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	20	-1	intron_retention	FALSE	canonical	3	431	junction_1	29.2479059079449	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGATGGATATGTTTT	8520	False	NA	-11	True	AATAAA	-21	NA	140805633	140793823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_140794924_140795505_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.7	chr4	-	5114	6	FSM	ENSMUSG00000028923.15	ENSMUST00000149178.8	1008	6	-3274	-832	11	-3	multi-exon	FALSE	canonical	3	362	junction_3	46.412929233135	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCAGATGGATATGTT	8511	False	NA	-13	True	AATAAA	-19	NA	140805642	140793825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140801091_140802270
ES.24905.8	chr4	-	1931	9	NNC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	195.920742903859	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCAGATGGATATGTT	8531	False	NA	-13	True	AATAAA	-19	NA	140805622	140793825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140794924_140795505_140795591_140797121_140797196_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ES.24905.9	chr4	-	2029	9	NNC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	197.581905484789	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTCAGATGGATATGTT	8528	False	NA	-13	True	AATAAA	-19	NA	140805625	140793825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140804931_140805101_140805523
ES.24906.1	chr4	+	2393	14	ISM	ENSMUSG00000045004.4	ENSMUST00000051907.3	2526	15	549	1	549	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	0.745796901140974	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGTACTGGATGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	140816192	140840070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140816392_140817732_140817900_140819422_140819566_140822464_140822637_140824179_140824431_140825297_140825359_140830284_140830743_140831265_140831355_140832140_140832279_140834454_140834527_140834637_140834756_140838578_140838755_140839290_140839475_140839905
ES.24907.1	chr4	+	180	1	Intergenic	novelGene_20527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGGAGAAGAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	140854034	140854214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140854000_140854200
ES.24908.1	chr4	+	176	1	Intergenic	novelGene_20528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	140860995	140861171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140861000_140861200
ES.24909.1	chr4	-	5192	1	Genic_Genomic	ENSMUSG00000040842.18	novel	NA	NA	NA	NA	24326	2791	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3065	False	NA	NA	False	NA	NA	NA	140842712	140837520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_140837500_140842700
ES.24909.10	chr4	-	978	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	-4	2229	-4	1337	multi-exon	FALSE	canonical	3	212	junction_2	123	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAGTTTAATGAATTT	NA	False	NA	64	True	AAAAAG	-15	NA	140867090	140842540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140867002
ES.24909.13	chr4	-	1107	5	NNC	ENSMUSG00000040842.18	novel	3244	4	NA	NA	5	1330	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	87.0470418796641	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTTTCAGCAGTTTAA	NA	False	NA	57	True	AAAAAG	-8	NA	140867072	140842547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140843176_140843847_140843952_140845837_140846093_140847634_140847685_140867002
ES.24909.2	chr4	-	3227	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	-27	3	-27	-3	multi-exon	FALSE	canonical	3	212	junction_2	123	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCTGGCTTCCTGTCT	NA	False	NA	-3	True	TATAAA	-44	NA	140867113	140840314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140867002
ES.24909.3	chr4	-	3239	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	-10	15	-1	-15	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTCCTCATTTCT	NA	False	NA	-15	True	TATAAA	-32	NA	140867087	140840326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ES.24909.4	chr4	-	3336	5	NNC	ENSMUSG00000040842.18	novel	3244	4	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	87.0470418796641	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTCCTCATTTCT	NA	False	NA	-15	True	TATAAA	-32	NA	140867080	140840326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140843176_140843847_140843952_140845837_140846093_140847634_140847685_140867002
ES.24909.6	chr4	-	3239	4	NNC	ENSMUSG00000040842.18	novel	3244	4	NA	NA	413	-17	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	184.717802787567	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACATTTGTCCTCATTT	NA	False	NA	-17	True	TATAAA	-30	NA	140866625	140840328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_140843176_140845837_140846093_140847634_140847685_140866538
ES.24909.7	chr4	-	2491	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	17	695	8	-695	multi-exon	FALSE	canonical	3	212	junction_2	123	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCCTTTTTTCTTC	NA	False	NA	NA	False	TATAAA	-17	NA	140867069	140841006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140867002
ES.24909.8	chr4	-	2539	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	9	696	9	-696	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCCTTTTTTCTT	NA	False	NA	NA	False	TATAAA	-16	NA	140867068	140841007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ES.24909.9	chr4	-	1024	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	-3	2223	-3	1343	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAATGAATTTTTAATT	NA	False	NA	70	True	AAAAAG	-21	NA	140867080	140842534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ES.2491.1	chr10	-	2319	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172991	25044987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.10	chr10	-	1712	3	NNC	ENSMUSG00000039166.17	novel	2391	3	NA	NA	-578	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25115193	25044989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25096508_25096657_25114940
ES.2491.11	chr10	-	2248	2	NNC	ENSMUSG00000039166.17	novel	2321	2	NA	NA	8930	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25067126	25044989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25067035
ES.2491.12	chr10	-	3254	9	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.6612742532322	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25172976	25044989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25096508_25096657_25114940_25115047_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.14	chr10	-	3452	9	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.3724604383804	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTTTCTTCTTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	25172952	25044992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25170358_25170506_25171795
ES.2491.15	chr10	-	1282	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-20	-5	combination_of_known_junctions	FALSE	canonical	3	110	junction_5	10.3430939199417	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAGTGTTCTTACAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	25172991	25046024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.16	chr10	-	1344	9	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	55.1582949337631	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAGTGTTCTTACAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	25172976	25046024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25170358_25170436_25172825
ES.2491.17	chr10	-	1125	7	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.2320778459039	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAGTGTTCTTACAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	25172971	25046024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25159790_25159940_25165496_25165629_25172825
ES.2491.18	chr10	-	2000	8	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	53.3502099148559	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGAGTGTTCTTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	25172961	25046025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165518_25172811
ES.2491.19	chr10	-	943	6	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	21040	-6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	50.2736511504784	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGAGTGTTCTTACAG	NA	False	NA	NA	False	ATTAAA	-16	NA	25150958	25046025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25150849
ES.2491.2	chr10	-	5596	8	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.0952167414008	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172955	25044987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25170358
ES.2491.20	chr10	-	3031	8	NNC	ENSMUSG00000039166.17	novel	720	5	NA	NA	22	-40772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59.4714817610688	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGGTTTTCTTTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	25172949	25086791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25088860_25096508_25096658_25115523_25115635_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.22	chr10	-	1085	7	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-5	46853	combination_of_known_junctions	FALSE	canonical	3	110	junction_4	10.7186234605424	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACTGCAGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	25172976	25096414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.23	chr10	-	2277	1	Intergenic	novelGene_1888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATATAAAGATGCATTT	NA	False	NA	NA	False	NA	NA	NA	25154902	25152625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25152600_25154900
ES.2491.24	chr10	-	1806	1	Genic_Genomic	ENSMUSG00000039166.17	novel	NA	NA	NA	NA	16087	1121	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGACAAATGGGACCT	NA	False	NA	NA	False	NA	NA	NA	25155911	25154105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_25154100_25155900
ES.2491.25	chr10	-	3539	4	Fusion	ENSMUSG00002076559.1_ENSMUSG00000039166.17	novel	397	3	NA	NA	-3	912	multi-exon	FALSE	canonical	3	4	junction_2	55.0413985610427	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAATGTCATTAGTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	25172974	25156585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_25159940_25165496_25165518_25165613_25165629_25172825
ES.2491.26	chr10	-	2514	3	FSM	ENSMUSG00002076559.1_ENSMUSG00000039166.17	ENSMUST00000177124.2	397	3	41	-2158	41	-165	multi-exon	FALSE	canonical	3	116	junction_2	4.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGGAGGGCCGGTCTT	NA	False	NA	NA	False	NA	NA	NA	25172930	25157662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_25159940_25165496_25165629_25172825
ES.2491.3	chr10	-	3155	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	36.4848305072513	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172981	25044987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172825
ES.2491.4	chr10	-	3683	8	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.3502099148559	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25172991	25044987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25172307
ES.2491.5	chr10	-	2261	2	NNC	ENSMUSG00000039166.17	novel	2321	2	NA	NA	8925	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25067131	25044987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25047147_25067029
ES.2491.6	chr10	-	2027	3	NNC	ENSMUSG00000039166.17	novel	2391	3	NA	NA	8914	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	3.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTCTTTTCTTTC	NA	False	NA	-1	True	AATAAA	-18	NA	25067142	25044988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25046538_25047147_25067035
ES.2491.7	chr10	-	2005	6	NNC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	21015	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	50.2736511504784	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTCTTTTCTTTC	NA	False	NA	-1	True	AATAAA	-18	NA	25150983	25044988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25046301_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25150849
ES.2491.8	chr10	-	2332	2	FSM	ENSMUSG00000039166.17	ENSMUST00000100012.3	2321	2	-13	2	-13	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25076069	25044989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_25047147_25075894
ES.2491.9	chr10	-	4172	8	NIC	ENSMUSG00000039166.17	novel	2092	8	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	53.0952167414008	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTCTTCTTTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	25172970	25044989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25171795
ES.24910.1	chr4	-	2430	3	Intergenic	novelGene_20529	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTTCACGGGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	140875120	140871920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140872498_140872736_140873543_140874073
ES.24910.2	chr4	-	262	1	Intergenic	novelGene_20530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140875133	140874871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140874900_140875100
ES.24911.1	chr4	+	5959	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	-21	-4	-21	4	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTATTAGTATAGTAA	NA	False	NA	19	True	AATAAA	-23	NA	140875202	140931377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.10	chr4	+	2493	11	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	8	-3267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	60.7833036285459	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGTTGTGGTCTT	NA	False	NA	4	True	AATAAA	-23	NA	140875240	140928106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759_140926904_140927060
ES.24911.11	chr4	+	2877	9	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	8	-2886	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	66.8856299962854	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCATCCGTCTGTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	140875240	140928487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.12	chr4	+	1560	1	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	8	-45723	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAGCTGTTTGCTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	140875240	140876800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875200_140876800
ES.24911.13	chr4	+	5932	10	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.0711410161479	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTTTTATTAGTA	NA	False	NA	13	True	AATAAA	-17	NA	140875242	140931371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895308_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.14	chr4	+	5395	7	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.2731446809879	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTTTTATTAGTA	NA	False	NA	13	True	AATAAA	-17	NA	140875243	140931371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.15	chr4	+	5422	7	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	103.411260938492	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTCTTAACTGTTTT	NA	False	NA	6	True	AATAAA	-10	NA	140875243	140931364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140907708_140907844_140922491_140922603_140924793_140924944_140925352_140925410_140926240_140926358_140926759
ES.24911.16	chr4	+	3047	9	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	20	3269	11	-3269	intron_retention	FALSE	canonical	3	178	junction_2	9.24662100445346	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCAGCTGTTGTGGTC	NA	False	NA	2	True	AATAAA	-21	NA	140875243	140928104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240
ES.24911.17	chr4	+	4399	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	21	1514	12	-1514	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAATCTCTACTTTGT	NA	False	NA	NA	False	NA	NA	NA	140875244	140929859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.18	chr4	+	5784	9	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	19	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.8968657229478	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAACTGTTTTATTA	NA	False	NA	10	True	AATAAA	-14	NA	140875251	140931368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140895023_140895289_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.19	chr4	+	2479	9	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	25	-3267	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	66.8856299962854	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCAGCTGTTGTGGTCTT	NA	False	NA	4	True	AATAAA	-23	NA	140875257	140928106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.2	chr4	+	2686	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	-14	3262	-14	-3262	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTGTGGTCTTAGTGG	NA	False	NA	9	True	AATAAA	-28	NA	140875209	140928111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.21	chr4	+	5950	10	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	62.5592065246008	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140875260	140931373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924944_140925352_140925410_140926240_140926358_140926759
ES.24911.22	chr4	+	3270	2	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	37	33310	28	-24460	5prime_fragment	FALSE	canonical	3	204	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATTTGTAATGATTTT	NA	False	NA	NA	False	NA	NA	NA	140875260	140898063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140875491_140895023
ES.24911.23	chr4	+	4795	3	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	36	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.5	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTCTTAACTGTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	140875268	140931365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875395_140926294_140926358_140926759
ES.24911.24	chr4	+	2764	11	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	38	-3266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.9467948075469	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGCTGTTGTGGTCTTA	NA	False	NA	5	True	AATAAA	-24	NA	140875270	140928107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140875994_140876138_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.26	chr4	+	2997	10	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	46	-3268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	63.4807251780869	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCAGCTGTTGTGGTCT	NA	False	NA	3	True	AATAAA	-22	NA	140875278	140928105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140925018_140925093_140925410_140926240_140926358_140926759
ES.24911.27	chr4	+	5528	8	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	63	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	90.138668682407	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAACTGTTTTATTA	NA	False	NA	10	True	AATAAA	-14	NA	140875295	140931368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924944_140925352_140925410_140926240_140926358_140926759
ES.24911.29	chr4	+	2774	1	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	18003	-26514	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGCAAATGAAGTATG	NA	False	NA	NA	False	NA	NA	NA	140893235	140896009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140893200_140896000
ES.24911.3	chr4	+	4552	11	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	60.7833036285459	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTGTTTTATTAGTAT	NA	False	NA	14	True	AATAAA	-18	NA	140875209	140931372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759_140929433_140930827
ES.24911.30	chr4	+	5663	9	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	19799	5	19790	-5	3prime_fragment	FALSE	canonical	3	178	junction_1	14.0706920583175	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAACTGTTTTATTA	NA	False	NA	10	True	AATAAA	-14	NA	140895022	140931368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.31	chr4	+	5406	8	ISM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	22909	-2	22900	2	3prime_fragment	FALSE	canonical	3	186	junction_1	12.8444381674223	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTTTATTAGTATAGT	NA	False	NA	17	True	AATAAA	-21	NA	140898132	140931375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.4	chr4	+	2753	10	NNC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	-9	-3262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.4232107915143	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTGTGGTCTTAGTGG	NA	False	NA	9	True	AATAAA	-28	NA	140875214	140928111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140875491_140895023_140895308_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924944_140925352_140925410_140926240_140926358_140926759
ES.24911.5	chr4	+	5665	9	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	65.646306065155	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140875227	140931373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.7	chr4	+	5537	8	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	69.7113582523519	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTTTTATTAGTATAG	NA	False	NA	16	True	AATAAA	-20	NA	140875239	140931374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.8	chr4	+	3035	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	16	2883	7	-2883	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGTCTGTCTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	140875239	140928490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24911.9	chr4	+	2388	9	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	8	-3264	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	65.646306065155	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGTTGTGGTCTTAGT	NA	False	NA	7	True	AATAAA	-26	NA	140875240	140928109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140875491_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ES.24912.1	chr4	-	4153	9	Antisense	novelGene_ENSMUSG00000028920.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATAGTCCTGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	140927094	140892259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_140895287_140898132_140898252_140907708_140907842_140920973_140921127_140922487_140922601_140924791_140924886_140925347_140925408_140926238_140926357_140926758
ES.24912.2	chr4	-	4233	2	Antisense	novelGene_ENSMUSG00000028920.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	140918133	140909864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_140913036_140917071
ES.24912.3	chr4	-	2500	1	Intergenic	novelGene_20531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACACTGGACATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	140918133	140915633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_140915600_140918100
ES.24913.1	chr4	+	188	1	Intergenic	novelGene_20532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTCCCAATAGT	1882	False	NA	NA	False	NA	NA	NA	140951952	140952140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_140952000_140952100
ES.24914.1	chr4	-	3448	1	Antisense	novelGene_ENSMUSG00000073733.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCATACAAATCAACTTCC	4388	False	NA	NA	False	NA	NA	NA	140953464	140950016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_140950000_140953500
ES.24915.1	chr4	+	3294	18	NNC	ENSMUSG00000028919.12	novel	663	4	NA	NA	57	-400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.6052030920267	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGACTCTGTGAGTTTT	354	False	NA	-13	True	NA	NA	NA	140966866	140984475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978044_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.10	chr4	+	4137	19	NNC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-70	351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.4301384550143	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCAGATATTTTTTTTT	378	False	NA	NA	False	NA	NA	NA	140966890	140985226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973256_140973364_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978035_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.12	chr4	+	3753	17	NNC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-67	-33	intron_retention	FALSE	canonical	0	0	junction_3	21.1415430787348	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTATTTGTTTAAAAAAA	381	False	NA	-19	True	NA	NA	NA	140966893	140984842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976370_140976459_140976537_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.13	chr4	+	2860	16	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-57	-372	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.3149337732923	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAAGCAACCACCGAC	391	False	NA	15	True	ATTAAA	-26	NA	140966903	140984503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.14	chr4	+	3348	16	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	18.9689805266973	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	396	False	NA	14	True	TTTAAA	-18	NA	140966908	140984875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.15	chr4	+	3855	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-46	352	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGATATTTTTTTTTC	402	False	NA	NA	False	NA	NA	NA	140966914	140985227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.16	chr4	+	1783	10	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	5910	382	1853	-382	3prime_fragment	FALSE	canonical	3	47	junction_2	10.3279555898864	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTTGCCAAGAAAGC	4101	False	NA	5	True	ATTAAA	-16	NA	140976089	140984493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.17	chr4	+	1165	4	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	11062	381	7005	-381	3prime_fragment	FALSE	canonical	3	67	junction_2	3.85861230093008	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTTGCCAAGAAAGCA	3839	False	NA	6	True	ATTAAA	-17	NA	140981241	140984494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.18	chr4	+	1404	4	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	11137	67	7080	-67	3prime_fragment	FALSE	canonical	3	67	junction_2	3.85861230093008	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATCTTCCCTGTT	3914	False	NA	0	True	NA	NA	NA	140981316	140984808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.19	chr4	+	1035	3	ISM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	11824	1	7767	-1	3prime_fragment	FALSE	canonical	3	67	junction_1	4.5	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTAGCATCTGCTT	4601	False	NA	13	True	TTTAAA	-17	NA	140982003	140984874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_140982092_140983614_140983720_140984032
ES.24915.2	chr4	+	3154	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	74	-380	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTTGCCAAGAAAGCAA	371	False	NA	7	True	ATTAAA	-18	NA	140966883	140984495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.3	chr4	+	3794	19	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	74	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.9109126974241	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCATCTGCTTCTGTG	371	False	NA	18	True	TTTAAA	-22	NA	140966883	140984879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973256_140973364_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.4	chr4	+	4100	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	74	417	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTTCCTGTGCAC	371	False	NA	NA	False	AATAGA	-22	NA	140966883	140985292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.5	chr4	+	3462	19	NNC	ENSMUSG00000028919.12	novel	663	4	NA	NA	74	-381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.1354556099875	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGTTGCCAAGAAAGCA	371	False	NA	6	True	ATTAAA	-17	NA	140966883	140984494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140967182_140967942_140968056_140969537_140969698_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.6	chr4	+	3892	17	NNC	ENSMUSG00000028919.12	novel	663	4	NA	NA	75	380	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	18.3931670396917	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGTCAGAATAGAGATG	372	False	NA	NA	False	NA	NA	NA	140966884	140985255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974521_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.7	chr4	+	3539	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-75	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATCTGCTTCTGTGCAC	373	False	NA	21	True	TTTAAA	-25	NA	140966885	140984882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.8	chr4	+	3318	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-74	-362	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGACTGGGGGGCCT	374	False	NA	25	True	ATTAAA	-36	NA	140966886	140984513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24915.9	chr4	+	3686	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-73	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATCTGCTTCTGTGCAC	375	False	NA	21	True	TTTAAA	-25	NA	140966887	140984882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ES.24916.1	chr4	+	3945	18	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-17839	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1818317897297	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	27	False	NA	8	True	AATAAA	-22	NA	141010711	141056695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141010822_141017302_141017420_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.10	chr4	+	3653	16	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5177	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	44.1857694537758	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGCTTTCATTCCTG	9564	False	NA	6	True	AATAAA	-20	NA	141023373	141056693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141023467_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141055723
ES.24916.11	chr4	+	160	1	Intergenic	novelGene_20536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATACATCT	NA	False	NA	-21	True	NA	NA	NA	141025787	141025947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141025800_141025900
ES.24916.12	chr4	+	3967	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	-54	0	-54	0	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028496	141056695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.13	chr4	+	3920	17	NNC	ENSMUSG00000006445.4	novel	3913	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.9021565334173	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028549	141056695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141028752_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.14	chr4	+	3163	15	NIC	ENSMUSG00000006445.4	novel	3913	17	NA	NA	-1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.2829723373465	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATTTTGGCTTTCAT	NA	False	NA	1	True	AATAAA	-15	NA	141028549	141056688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141028746_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.15	chr4	+	4083	16	NIC	ENSMUSG00000006445.4	novel	3913	17	NA	NA	0	-3	intron_retention	FALSE	canonical	3	98	junction_7	18.0903903280781	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGCTTTCATTCCT	NA	False	NA	5	True	AATAAA	-19	NA	141028550	141056692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.18	chr4	+	3562	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	59	292	59	-292	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTGGAAAGAATGAGT	NA	False	NA	NA	False	ATTAAA	-12	NA	141028609	141056403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.19	chr4	+	3848	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-280	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.6894154477206	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141029437	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141029569_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.2	chr4	+	5323	1	Intergenic	novelGene_20534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACGAGAAGCAGGCTAT	3141	False	NA	NA	False	NA	NA	NA	141016950	141022273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141017000_141022300
ES.24916.20	chr4	+	3820	17	NIC	ENSMUSG00000006445.4	novel	969	4	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	35.477050240261	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141029723	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141029827_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.21	chr4	+	3255	15	NNC	ENSMUSG00000006445.4	novel	3913	17	NA	NA	-121	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.2953079664454	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141036083	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048846_141048982_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.23	chr4	+	2612	9	NIC	ENSMUSG00000006445.4	novel	3913	17	NA	NA	2036	-1	intron_retention	FALSE	canonical	3	98	junction_1	18.6643878817389	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	NA	False	NA	7	True	AATAAA	-21	NA	141046259	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141046388_141047804_141047905_141048527_141048902_141049012_141049202_141049373_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.24	chr4	+	2751	1	Genic_Genomic	ENSMUSG00000006445.4	novel	NA	NA	NA	NA	9722	1	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTCATTCCTGGAT	NA	False	NA	9	True	AATAAA	-23	NA	141053945	141056696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_141053900_141056700
ES.24916.3	chr4	+	3944	19	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-11599	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.2182753360074	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTTGGCTTTCATTCC	3142	False	NA	4	True	AATAAA	-18	NA	141016951	141056691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141017027_141017302_141017405_141017538_141017592_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.4	chr4	+	3883	18	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-11596	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7355164940136	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGATTTTGGCTTTC	3145	False	NA	-1	True	AATAAA	-13	NA	141016954	141056686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141017027_141017302_141017405_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.5	chr4	+	1883	4	Intergenic	novelGene_20535	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTATGCAGTCACTT	3157	False	NA	NA	False	NA	NA	NA	141016966	141024622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141017027_141017302_141017405_141021851_141021987_141023036
ES.24916.6	chr4	+	4168	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-11582	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.9021565334173	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	3159	False	NA	7	True	AATAAA	-21	NA	141016968	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141017420_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.7	chr4	+	3999	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-11428	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	35.2650677016222	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTTTCATTCCTGG	3313	False	NA	7	True	AATAAA	-21	NA	141017122	141056694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141017405_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.8	chr4	+	3753	16	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5189	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0585122924995	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGCTTTCATTCCTG	9552	False	NA	6	True	AATAAA	-20	NA	141023361	141056693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141023467_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24916.9	chr4	+	3818	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5187	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5838502855167	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGCTTTCATTCCT	9554	False	NA	5	True	AATAAA	-19	NA	141023363	141056692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141023467_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ES.24917.1	chr4	-	123	1	Intergenic	novelGene_20533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141012369	141012246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141012200_141012400
ES.24918.1	chr4	-	1627	3	Intergenic	novelGene_20537	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCTATGAAGACAATTT	959	False	NA	NA	False	NA	NA	NA	141066305	141064379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141064787_141064828_141065813_141066069
ES.24918.2	chr4	-	2922	2	Intergenic	novelGene_20538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGCT	NA	False	NA	NA	False	NA	NA	NA	141067680	141064392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141065704_141066069
ES.24919.1	chr4	-	199	1	Intergenic	novelGene_20539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTAAAAAAAAAGAAAAG	4894	False	NA	NA	False	NA	NA	NA	141073426	141073227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141073200_141073400
ES.2492.1	chr10	-	178	1	Intergenic	novelGene_1889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	25177425	25177247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25177200_25177400
ES.24920.1	chr4	-	491	3	Antisense	novelGene_ENSMUSG00000085836.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGTACTTTTAAAATT	7335	False	NA	NA	False	AATAAA	-19	NA	141080884	141078148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_141078287_141078773_141078963_141080720
ES.24920.2	chr4	-	3284	1	Intergenic	novelGene_20540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTTTTTTTTTAAT	6770	False	NA	NA	False	AATAAA	-2	NA	141081449	141078165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141078200_141081400
ES.24920.3	chr4	-	1092	2	Intergenic	novelGene_20541	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGAGTCTACTTGGT	7001	False	NA	NA	False	NA	NA	NA	141081218	141078368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141078963_141080720
ES.24921.1	chr4	-	177	1	Intergenic	novelGene_20542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATATTTTAAACAA	4962	False	NA	NA	False	NA	NA	NA	141083257	141083080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141083100_141083300
ES.24922.1	chr4	+	1533	7	FSM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	-97	-3	-97	3	multi-exon	FALSE	canonical	3	37	junction_5	7.90393713425292	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGACCTGGTCTTCCTG	7089	False	NA	16	True	ATTAAA	-22	NA	141095433	141111489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141095636_141106988_141107105_141107629_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
ES.24922.2	chr4	+	1290	1	Genic_Genomic	ENSMUSG00000006218.5	novel	NA	NA	NA	NA	-86	-14752	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGGCCATTGTCCCA	7100	False	NA	NA	False	NA	NA	NA	141095444	141096734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_141095400_141096700
ES.24922.3	chr4	+	3347	5	NIC	ENSMUSG00000006218.5	novel	1433	7	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	37	junction_3	6.65206734782504	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAACTTGACCTGGTCT	7148	False	NA	11	True	ATTAAA	-17	NA	141095492	141111484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141095636_141106988_141107105_141107629_141109821_141110054_141110166_141110698
ES.24923.1	chr4	+	183	1	Intergenic	novelGene_20543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGGTTTTTTTTTTTT	5930	False	NA	NA	False	NA	NA	NA	141113032	141113215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141113000_141113200
ES.24924.1	chr4	-	1738	13	ISM	ENSMUSG00000033770.14	ENSMUST00000105790.8	2511	19	3627	1	250	-1	3prime_fragment	FALSE	canonical	1	1	junction_10	15.3539263888934	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTTCACCCATCTT	NA	False	NA	0	True	AATAAA	-19	NA	141121888	141111921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117387_141117499_141117652_141117723_141118656_141118831_141119083_141119169_141119835_141119938_141120051_141120137_141121723
ES.24924.2	chr4	-	1202	7	NNC	ENSMUSG00000033770.14	novel	2511	19	NA	NA	4936	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.4215829501922	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTTCACCCATCTT	NA	False	NA	0	True	AATAAA	-19	NA	141117202	141111921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141116946
ES.24924.4	chr4	-	969	7	NNC	ENSMUSG00000033770.14	novel	2511	19	NA	NA	4751	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	13.4215829501922	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTTCACCCATCTT	NA	False	NA	0	True	AATAAA	-19	NA	141117387	141111921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141112260_141112587_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117364
ES.24924.5	chr4	-	242	1	Intergenic	novelGene_20544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACACGTACAAATTTGC	NA	False	NA	NA	False	NA	NA	NA	141118258	141118016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141118000_141118300
ES.24925.1	chr4	-	916	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2955	-2	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	35.5387112878337	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGTGTCCCCTCTCCTC	4180	False	NA	-6	True	AATAAA	-16	NA	141135623	141131665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
ES.24925.10	chr4	-	1967	11	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	4198	-6	intron_retention	TRUE	canonical	1	1	junction_6	46.6244571013969	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTAGTGTCCCCTCT	729	False	NA	-10	True	AATAAA	-12	NA	141139074	141131669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616_141135728_141135886_141135957_141137052_141137138_141137826_141137929_141138004_141138090_141138693_141138820_141138900
ES.24925.11	chr4	-	908	7	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7681	8	-2976	-8	3prime_fragment	FALSE	canonical	3	53	junction_6	23.8146780135464	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCATTAGTGTCCCCT	4159	False	NA	-12	True	AATAAA	-10	NA	141135644	141131671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135616
ES.24925.12	chr4	-	811	6	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2943	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.8541873868184	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCATTAGTGTCCCCT	4192	False	NA	-12	True	AATAAA	-10	NA	141135611	141131671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141131944_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
ES.24925.13	chr4	-	824	6	NIC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2976	-8	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	42.4235783497809	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCATTAGTGTCCCCT	4159	False	NA	-12	True	AATAAA	-10	NA	141135644	141131671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141131944_141132063_141132151_141132582_141132672_141134399_141134534_141135114_141135329_141135616
ES.24925.14	chr4	-	1075	2	ISM	ENSMUSG00000006216.11	ENSMUST00000006378.9	2370	20	7993	2013	-2664	-2013	internal_fragment	FALSE	canonical	3	126	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACCTTGTGGTTCTCT	4471	False	NA	NA	False	AATAAA	-15	NA	141135332	141133676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141134534_141135114
ES.24925.2	chr4	-	3377	2	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2957	-4	intron_retention	FALSE	canonical	3	126	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTAGTGTCCCCTCTCC	4178	False	NA	-8	True	AATAAA	-14	NA	141135625	141131667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141134534_141135114
ES.24925.3	chr4	-	1007	5	ISM	ENSMUSG00000006216.11	ENSMUST00000105788.2	2490	19	7993	5	-2664	-5	3prime_fragment	FALSE	canonical	3	74	junction_2	21.7298757474588	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTAGTGTCCCCTCTC	4471	False	NA	-9	True	AATAAA	-13	NA	141135332	141131668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114
ES.24925.4	chr4	-	1761	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2976	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.7510117598044	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTAGTGTCCCCTCTC	4159	False	NA	-9	True	AATAAA	-13	NA	141135644	141131668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141133522_141134399_141134534_141135114_141135329_141135616
ES.24925.5	chr4	-	627	3	NIC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2664	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	62	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTAGTGTCCCCTCTC	4471	False	NA	-9	True	AATAAA	-13	NA	141135332	141131668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141131944_141134399_141134534_141135114
ES.24925.6	chr4	-	1299	3	NIC	ENSMUSG00000006216.11	novel	2490	19	NA	NA	-2608	-5	intron_retention	FALSE	canonical	3	108	junction_1	9	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTAGTGTCCCCTCTC	4527	False	NA	-9	True	AATAAA	-13	NA	141135276	141131668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141132672_141134399_141134534_141135114
ES.24926.1	chr4	+	3372	2	NIC	ENSMUSG00000006221.8	novel	2769	3	NA	NA	-82	1	intron_retention	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGGAGACCCCACC	66	False	NA	NA	False	AATAAA	-14	NA	141148007	141152623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141149946_141151189
ES.24926.2	chr4	+	2690	3	FSM	ENSMUSG00000006221.8	ENSMUST00000102486.5	2769	3	78	1	78	-1	multi-exon	FALSE	canonical	3	12	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACTTGTGGAGACCCCA	226	False	NA	NA	False	AATAAA	-12	NA	141148167	141152621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141149292_141149811_141149946_141151189
ES.24927.1	chr4	+	384	1	Intergenic	novelGene_20545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	141162618	141163002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141162600_141163000
ES.24927.10	chr4	+	3436	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	2	-716	2	11	multi-exon	FALSE	canonical	3	129	junction_3	19.5436832648187	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCGCTGAGAAAAACAGTT	NA	False	NA	NA	False	AATAAA	-32	NA	141171966	141195252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.11	chr4	+	2786	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	44.2053792603972	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCCTGTGGTCCCT	NA	False	NA	2	True	AATAAA	-12	NA	141171972	141194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190908_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.12	chr4	+	2965	13	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	9	-2	intron_retention	FALSE	canonical	3	129	junction_3	21.2529409729571	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171973	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192401_141192659_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.13	chr4	+	2703	15	NNC	ENSMUSG00000006215.13	novel	3478	15	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_3	46.035977501187	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171977	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189930_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.14	chr4	+	3150	15	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	13	0	intron_retention	FALSE	canonical	3	129	junction_3	18.7258688253791	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	5	True	AATAAA	-15	NA	141171977	141194536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.15	chr4	+	3471	13	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-13	4	intron_retention	FALSE	canonical	3	129	junction_3	18.6406068093885	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171981	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141193154_141193287_141193869_141193984_141194075_141194153
ES.24927.16	chr4	+	3909	10	NIC	ENSMUSG00000006215.13	novel	2973	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	135	junction_4	18.098495947331	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171981	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141190035_141190577_141191107_141191547_141192401_141192659_141192748_141192834_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.17	chr4	+	2699	15	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	2	junction_11	58.7454296963098	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171983	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191783_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192878_141193032_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.18	chr4	+	2682	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	42.4261973575552	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTGCCTGTGGTCCC	NA	False	NA	1	True	AATAAA	-11	NA	141171983	141194532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189096_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.19	chr4	+	2776	15	ISM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	29	-4	-1	4	intron_retention	FALSE	canonical	3	129	junction_3	18.407102666401	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171993	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.2	chr4	+	174	2	Intergenic	novelGene_20546	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGATCCTGTA	NA	False	NA	NA	False	NA	NA	NA	141162619	141292435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141162690_141292331
ES.24927.20	chr4	+	2859	14	NIC	ENSMUSG00000006215.13	novel	3478	15	NA	NA	-1	4	intron_retention	FALSE	canonical	3	129	junction_3	19.3812573403965	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171993	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.21	chr4	+	2865	14	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-1	4	intron_retention	FALSE	canonical	3	129	junction_3	20.6998842291591	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171993	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.22	chr4	+	3137	13	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	1	4	intron_retention	FALSE	canonical	3	129	junction_3	19.3728045351094	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171995	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141194075_141194153
ES.24927.23	chr4	+	3033	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	1	4	intron_retention	FALSE	canonical	2	3	junction_3	65.4562109776876	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171995	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141175353_141175538_141189079_141189287_141189845_141190035_141190577_141190719_141190908_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.25	chr4	+	2767	15	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	129	junction_3	20.2161786090008	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTGCCTGTGGTCCC	NA	False	NA	1	True	AATAAA	-11	NA	141172002	141194532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.26	chr4	+	2789	17	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.6541304393714	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTGGTCCCTGTGTC	NA	False	NA	7	True	AATAAA	-17	NA	141172002	141194538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141175353_141175542_141189079_141189287_141189930_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.27	chr4	+	242	2	NNC	ENSMUSG00000006215.13	novel	338	3	NA	NA	-5	-13919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGAGGGGTTACGT	NA	False	NA	NA	False	NA	NA	NA	141172004	141172721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141172588
ES.24927.28	chr4	+	2691	16	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.4744121190301	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141172014	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190556_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.29	chr4	+	3696	9	NNC	ENSMUSG00000006215.13	novel	3478	15	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_2	54.8771354937555	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141172019	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141188996_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192952_141193032_141193154_141193287
ES.24927.3	chr4	+	2899	16	NNC	ENSMUSG00000006215.13	novel	867	7	NA	NA	-3565	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	44.5622660505001	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141168399	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141168722_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.30	chr4	+	2724	15	NNC	ENSMUSG00000006215.13	novel	3478	15	NA	NA	7	-3	intron_retention	FALSE	canonical	2	12	junction_2	43.7063484857656	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCCTGTGGTCCCT	NA	False	NA	2	True	AATAAA	-12	NA	141172023	141194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189096_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.31	chr4	+	2689	15	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	41	-2	intron_retention	FALSE	canonical	2	12	junction_2	42.5316808691006	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141172057	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141172114_141174561_141174649_141189096_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.32	chr4	+	2786	14	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	41	-3	intron_retention	FALSE	canonical	3	129	junction_3	18.9052448813463	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCCTGTGGTCCCT	NA	False	NA	2	True	AATAAA	-12	NA	141172057	141194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.33	chr4	+	3436	17	NNC	ENSMUSG00000006215.13	novel	867	7	NA	NA	378	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.948988396664	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141172394	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141173070_141174561_141174649_141175353_141175538_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.34	chr4	+	2561	15	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	2542	2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	43.3434904370346	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTGGTCCCTGTGTC	NA	False	NA	7	True	AATAAA	-17	NA	141174558	141194538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141174649_141189096_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.35	chr4	+	4267	2	NIC	ENSMUSG00000006215.13	novel	867	7	NA	NA	-543	-3	intron_retention	FALSE	canonical	3	182	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCCTGTGGTCCCT	9946	False	NA	2	True	AATAAA	-12	NA	141190150	141194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141193869_141193984
ES.24927.36	chr4	+	2213	7	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-563	-2	intron_retention	FALSE	canonical	3	138	junction_1	17.5562587763516	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141191565	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141191790_141191870_141192401_141192659_141192748_141192834_141193154_141193287_141193869_141193984_141194075_141194153
ES.24927.37	chr4	+	1954	8	NNC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-499	-2	intron_retention	FALSE	canonical	0	0	junction_5	60.9693800700192	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141191629	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141193419_141193661_141193869_141193984_141194075_141194153
ES.24927.38	chr4	+	4244	1	Antisense	novelGene_ENSMUSG00000040761.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCGAGGGCTGTCATA	6447	False	NA	NA	False	AATAAA	-4	NA	141200119	141204363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141200100_141204400
ES.24927.39	chr4	+	8185	2	Antisense	novelGene_ENSMUSG00000040761.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGCTGGCGAGATGGC	1311	False	NA	NA	False	NA	NA	NA	141224032	141232273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141227955_141228010
ES.24927.4	chr4	+	2939	17	NNC	ENSMUSG00000006215.13	novel	867	7	NA	NA	-3428	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.948988396664	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCCTGTGGTCCCT	NA	False	NA	2	True	AATAAA	-12	NA	141168536	141194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141168722_141174561_141174649_141175353_141175538_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.40	chr4	+	3014	1	Antisense	novelGene_ENSMUSG00000040761.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACTTTTTGTTTCGTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	141263741	141266755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141263700_141266800
ES.24927.41	chr4	+	1129	1	Genic_Genomic	ENSMUSG00000048406.6	novel	NA	NA	NA	NA	-45	-620	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAAATAC	NA	False	NA	NA	False	AAAAAG	-14	NA	141273454	141274583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_141273500_141274600
ES.24927.42	chr4	+	278	1	Intergenic	novelGene_20551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	774	False	NA	NA	False	NA	NA	NA	141283700	141283978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141283700_141284000
ES.24927.43	chr4	+	176	1	Intergenic	novelGene_20550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	774	False	NA	NA	False	NA	NA	NA	141283700	141283876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141283700_141283900
ES.24927.44	chr4	+	182	1	Intergenic	novelGene_20552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATGCCTCCAT	1602	False	NA	NA	False	NA	NA	NA	141284528	141284710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141284500_141284700
ES.24927.45	chr4	+	249	1	Intergenic	novelGene_20553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAACAAACCCAAGAA	4103	False	NA	NA	False	AGTAAA	-8	NA	141288914	141289163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141288900_141289200
ES.24927.46	chr4	+	354	1	Intergenic	novelGene_20554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTCGAAAATCCAAAAAA	4104	False	NA	4	True	NA	NA	NA	141288915	141289269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141288900_141289300
ES.24927.47	chr4	+	175	1	Intergenic	novelGene_20555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAGATCCTGTA	7449	False	NA	NA	False	NA	NA	NA	141292260	141292435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141292300_141292400
ES.24927.48	chr4	+	401	1	Intergenic	novelGene_20556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTTTTCAATGTGGGTT	7452	False	NA	NA	False	NA	NA	NA	141292263	141292664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141292300_141292700
ES.24927.5	chr4	+	2781	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	-55	-4	-55	4	multi-exon	FALSE	canonical	3	129	junction_3	19.5436832648187	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171909	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.7	chr4	+	2822	15	FSM	ENSMUSG00000006215.13	ENSMUST00000142438.8	3478	15	-45	701	-15	4	multi-exon	FALSE	canonical	3	129	junction_3	19.043987749097	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTCCCTGTGTCAC	NA	False	NA	9	True	AATAAA	-19	NA	141171949	141194540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ES.24927.8	chr4	+	3238	12	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	129	junction_3	19.9855319569759	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171957	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984
ES.24927.9	chr4	+	2836	12	NIC	ENSMUSG00000006215.13	novel	2722	16	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_5	66.3084452943618	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTGTGGTCCCTG	NA	False	NA	3	True	AATAAA	-13	NA	141171964	141194534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141191547_141191783_141191870_141192401_141192659_141192748_141192834_141193154_141193287_141193419_141193658_141193869_141193984
ES.24928.1	chr4	+	3858	1	Antisense	novelGene_ENSMUSG00000006219.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	141317277	141321135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141317300_141321100
ES.24928.2	chr4	+	202	1	Intergenic	novelGene_20561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAGCAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	141319736	141319938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141319700_141319900
ES.24928.3	chr4	+	349	1	Intergenic	novelGene_20562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	141319740	141320089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141319700_141320100
ES.24928.4	chr4	+	177	1	Intergenic	novelGene_20563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGTGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	141320842	141321019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141320800_141321000
ES.24929.1	chr4	+	178	1	Intergenic	novelGene_20564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTGTTAACTCAGG	NA	False	NA	NA	False	NA	NA	NA	141339629	141339807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141339600_141339800
ES.2493.1	chr10	+	3433	2	Intergenic	novelGene_1890	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCATAAAGTAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	25203646	25215360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_25203742_25212022
ES.24930.1	chr4	-	931	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	-33	7	-33	-7	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAGCGAAGGGAGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	141163449	141159989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141160768_141163296
ES.24931.1	chr4	-	173	1	Intergenic	novelGene_20547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAATAGCGGCT	NA	False	NA	NA	False	NA	NA	NA	141184417	141184244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141184200_141184400
ES.24932.1	chr4	-	13444	16	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-56	24	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	25.7117353232592	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGGCGCCTCGGTTT	NA	False	NA	-3	True	ATTAAA	-37	NA	141265816	141195176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141248169_141249704_141265474
ES.24932.10	chr4	-	1877	2	NIC	ENSMUSG00000040761.17	novel	12082	15	NA	NA	1438	-15	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAACACCTCA	NA	False	NA	-42	True	NA	NA	NA	141197366	141195215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141196853_141197126
ES.24932.100	chr4	-	2548	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	-68	-2	-68	2	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345360	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
ES.24932.101	chr4	-	1291	5	NNC	ENSMUSG00000043085.15	novel	2898	6	NA	NA	-67	2	intron_retention	FALSE	non_canonical	0	0	junction_1	45.6124982872019	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345359	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141342021_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ES.24932.102	chr4	-	2343	5	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	2	intron_retention	FALSE	canonical	1	1	junction_2	45.1573637405905	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345343	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141342018_141342255_141343745_141344605_141344781_141344950_141345024_141345209
ES.24932.103	chr4	-	3442	3	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	2	intron_retention	FALSE	canonical	3	109	junction_2	2.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345343	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141344781_141344950_141345024_141345209
ES.24932.104	chr4	-	1418	3	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	1416	0	intron_retention	FALSE	canonical	0	0	junction_2	38.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141343876	141341547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141342018_141342255_141342842_141343514
ES.24932.105	chr4	-	3357	3	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-36	0	intron_retention	FALSE	canonical	3	77	junction_1	16	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345328	141341547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141345024_141345209
ES.24932.106	chr4	-	1378	5	NIC	ENSMUSG00000043085.15	novel	2898	6	NA	NA	-66	0	intron_retention	FALSE	canonical	2	2	junction_4	33.7379608156747	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345358	141341547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141342422_141343514_141343933_141344605_141344781_141345209
ES.24932.107	chr4	-	3442	3	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-30	-1	intron_retention	FALSE	canonical	0	0	junction_1	54.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACCTGCGTTGAGGATC	NA	False	NA	-9	True	AATAAA	-11	NA	141345322	141341548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141344805_141344950_141345024_141345209
ES.24932.108	chr4	-	1630	5	NIC	ENSMUSG00000043085.15	novel	1671	6	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	57	junction_2	19.2613602842582	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACCTGCGTTGAGGATC	NA	False	NA	-9	True	AATAAA	-11	NA	141345343	141341548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141345024_141345209
ES.24932.11	chr4	-	11889	15	FSM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	-44	237	-44	-237	multi-exon	FALSE	canonical	3	15	junction_6	23.4699112630167	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTACCGTCACTCAT	NA	False	NA	NA	False	AAGAAA	-20	NA	141265804	141195437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.12	chr4	-	11955	16	FSM	ENSMUSG00000040761.17	ENSMUST00000105786.3	12299	16	29	315	29	259	multi-exon	FALSE	canonical	2	5	junction_5	24.6816170909084	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTTCCCTGACATACA	NA	False	NA	NA	False	NA	NA	NA	141265879	141195515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.13	chr4	-	2615	2	ISM	ENSMUSG00000040761.17	ENSMUST00000147227.2	481	3	-721	377	-721	-377	5prime_fragment	FALSE	canonical	3	63	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACCGTGGACAACCCA	8330	False	NA	NA	False	NA	NA	NA	141199525	141196151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141197922_141198680
ES.24932.14	chr4	-	3555	3	NIC	ENSMUSG00000040761.17	novel	12082	15	NA	NA	-1760	-377	intron_retention	FALSE	canonical	3	63	junction_2	1.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACCGTGGACAACCCA	9800	False	NA	NA	False	NA	NA	NA	141200564	141196151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141197322_141197420_141197922_141198680
ES.24932.15	chr4	-	12455	16	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-43	-377	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	26.7711287272938	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACCGTGGACAACCCA	NA	False	NA	NA	False	NA	NA	NA	141265803	141196151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208126_141211035_141211134_141212867_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141248169_141249704_141265474
ES.24932.16	chr4	-	11261	15	FSM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	-130	951	18	-377	multi-exon	FALSE	canonical	3	15	junction_6	23.4699112630167	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACCGTGGACAACCCA	NA	False	NA	NA	False	NA	NA	NA	141265890	141196151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.17	chr4	-	2986	6	NNC	ENSMUSG00000040761.17	novel	12082	15	NA	NA	-3653	-377	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	39.0466387797977	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACCGTGGACAACCCA	7907	False	NA	NA	False	NA	NA	NA	141202457	141196151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197540_141198671_141198928_141200397
ES.24932.18	chr4	-	1851	6	NIC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-61	-394	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.1720375481566	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	141265969	141196168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141249382_141249704_141265474
ES.24932.19	chr4	-	11295	16	FSM	ENSMUSG00000040761.17	ENSMUST00000105786.3	12299	16	36	968	36	-394	multi-exon	FALSE	canonical	2	5	junction_5	24.6816170909084	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	141265872	141196168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.2	chr4	-	7303	5	NNC	ENSMUSG00000040761.17	novel	12082	15	NA	NA	-5171	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	32.4268407341819	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGTGAAGGTGGTTGT	6389	False	NA	-25	True	ATTAAA	-15	NA	141203975	141195198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197325_141197420_141197922_141198680
ES.24932.20	chr4	-	3328	7	NNC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-51	142276	intron_retention	TRUE	non_canonical	0	0	junction_1	46.3204418516634	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACAGGTGGACTATC	NA	False	NA	NA	False	NA	NA	NA	141345343	141198410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141198489_141340534_141340808_141341099_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
ES.24932.21	chr4	-	3188	2	Intergenic	novelGene_20548	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCGGAGTGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	141243641	141240411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141240731_141240772
ES.24932.22	chr4	-	5988	2	FSM	ENSMUSG00000040761.17	ENSMUST00000152081.2	680	2	-196	-5112	0	5112	multi-exon	FALSE	canonical	3	40	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCTTGGATTTTTGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	141265760	141244001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141249704_141265474
ES.24932.23	chr4	-	2474	3	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-33	5105	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	16.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGTAATCTTGGATT	NA	False	NA	NA	False	AATAAA	-17	NA	141265793	141244008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141244630_141248169_141249704_141265474
ES.24932.24	chr4	-	2462	1	Intergenic	novelGene_20549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141254252	141251790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141251800_141254300
ES.24932.25	chr4	-	1139	2	Intergenic	novelGene_20558	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1325	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141324959	141299058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141299115_141323876
ES.24932.26	chr4	-	364	1	Intergenic	novelGene_20557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141299422	141299058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141299100_141299400
ES.24932.27	chr4	-	2604	2	Intergenic	novelGene_20559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACACCAGCACTCAGG	NA	False	NA	NA	False	NA	NA	NA	141302345	141299170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141301732_141302302
ES.24932.28	chr4	-	2998	2	Intergenic	novelGene_20560	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACACCAGCACTCAGG	NA	False	NA	NA	False	NA	NA	NA	141302797	141299170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141301732_141302360
ES.24932.29	chr4	-	3300	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	54	-318	18	318	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAATTAATTAAAGGGA	NA	False	NA	NA	False	TATAAA	-10	NA	141327181	141303054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.3	chr4	-	4308	16	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	26.4773278275752	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGTGAAGGTGGTTGT	NA	False	NA	-25	True	ATTAAA	-15	NA	141265792	141195198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141206554_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221707_141244146_141244630_141249382_141249704_141265474
ES.24932.30	chr4	-	3021	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-264	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	527.600405136311	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTTTTGTCTGGGG	NA	False	NA	0	True	AATAAA	-18	NA	141324044	141303368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323288_141324014
ES.24932.31	chr4	-	3160	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-120	-4	-12	4	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTTTTGTCTGGGG	NA	False	NA	0	True	AATAAA	-18	NA	141327355	141303368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.32	chr4	-	3155	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-1728	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	527.600405136311	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTTTTTGTCTGG	NA	False	NA	-2	True	AATAAA	-16	NA	141329071	141303370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141328877
ES.24932.33	chr4	-	3088	8	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	541.948073421905	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTTGTCTG	NA	False	NA	-3	True	AATAAA	-15	NA	141325561	141303371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322801_141325389
ES.24932.34	chr4	-	3053	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTTGTCTG	NA	False	NA	-3	True	AATAAA	-15	NA	141327349	141303371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ES.24932.35	chr4	-	3021	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-325	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	520.417485654546	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTGTTTTTGTCTG	NA	False	NA	-3	True	AATAAA	-15	NA	141324105	141303371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141324044
ES.24932.36	chr4	-	3016	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	802	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	527.600405136311	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141324715	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141324658
ES.24932.37	chr4	-	5197	8	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	692.538336078787	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327238	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141310560_141312006_141312177_141316608_141316727_141317254_141317626_141322534_141322791_141323205_141323260_141327158
ES.24932.38	chr4	-	3133	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325598	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ES.24932.39	chr4	-	2956	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	517.29825475735	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327190	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323225_141327158
ES.24932.4	chr4	-	12005	18	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	27.0534521522929	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGAAGGTGGTT	NA	False	NA	-27	True	ATTAAA	-13	NA	141265780	141195200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197204_141197420_141197922_141198680_141201860_141202678_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221707_141244146_141244630_141248169_141248944_141249382_141249704_141265474
ES.24932.40	chr4	-	3138	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	-37	0	-37	0	multi-exon	FALSE	canonical	3	19	junction_8	521.665826343839	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325572	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ES.24932.41	chr4	-	4471	8	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	38	0	intron_retention	FALSE	canonical	3	77	junction_7	531.110081214193	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327305	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ES.24932.42	chr4	-	3017	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	653.978772113438	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327318	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305247_141308289_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ES.24932.43	chr4	-	3091	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	523.226767281644	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325932	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325800
ES.24932.44	chr4	-	4984	8	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	1168	junction_4	209.984644725295	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327230	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.45	chr4	-	3417	9	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	519.761709223563	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327231	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305492_141308145_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.47	chr4	-	3232	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	525.413036929043	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325564	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325291
ES.24932.49	chr4	-	5086	8	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	149	0	131	0	3prime_fragment	FALSE	canonical	3	1168	junction_5	184.331002187226	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325386	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
ES.24932.5	chr4	-	13475	15	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	24.7810823172905	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGAAGGTGGTT	NA	False	NA	-27	True	ATTAAA	-13	NA	141265940	141195200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141248169_141249704_141265474
ES.24932.51	chr4	-	3041	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-881	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	527.600405136311	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141328224	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141328142
ES.24932.52	chr4	-	3024	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	521.977968883745	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327195	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323288_141327158
ES.24932.53	chr4	-	3102	10	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-853	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	644.3437852422	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141328196	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327738_141327828_141328142
ES.24932.55	chr4	-	2952	8	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	518	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	556.470693435927	1318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141323262	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310534_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
ES.24932.56	chr4	-	3031	10	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	620.49092471552	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327180	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141315359_141315410_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.57	chr4	-	3086	10	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	634.044065143118	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327207	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141311734_141311813_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.58	chr4	-	3095	10	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	699.695489322161	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327342	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141315359_141315410_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ES.24932.59	chr4	-	2711	7	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	571.330732199446	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327234	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317415_141327150
ES.24932.6	chr4	-	11540	15	NNC	ENSMUSG00000040761.17	novel	12082	15	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.6130254216779	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTGTGAAGGTGGT	NA	False	NA	-28	True	ATTAAA	-12	NA	141265592	141195201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197540_141198671_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.60	chr4	-	3766	13	NNC	ENSMUSG00000006219.13	novel	3091	9	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	755.084997974842	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141333611	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327738_141327828_141328877_141329021_141329293_141329402_141329490_141329578_141333231
ES.24932.61	chr4	-	2962	9	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	665.0091634707	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327229	141303372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317419_141322549_141322791_141323205_141323225_141327158
ES.24932.66	chr4	-	2990	8	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-40	-2	combination_of_known_splicesites	FALSE	canonical	3	77	junction_7	675.679431296788	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTCTTGTTTTTGT	NA	False	NA	-6	True	AATAAA	-12	NA	141325575	141303374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ES.24932.67	chr4	-	2996	9	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	521.535713062874	1319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTCTTGTTTTTGT	NA	False	NA	-6	True	AATAAA	-12	NA	141327230	141303374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317419_141322549_141322791_141323205_141323260_141327158
ES.24932.68	chr4	-	7329	5	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	3945	2	2190	-2	intron_retention	FALSE	canonical	3	1308	junction_2	140.321728538384	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTGTCTTGTTTTTGT	NA	False	NA	-6	True	AATAAA	-12	NA	141321590	141303374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608
ES.24932.69	chr4	-	2483	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	55	498	19	-498	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTCGAGGCTGAGCC	NA	False	NA	NA	False	GGGGCT	-37	NA	141327180	141303870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.7	chr4	-	4482	4	ISM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	65359	1	-1597	-1	intron_retention	FALSE	canonical	3	66	junction_3	11.323525167642	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTGTGAAGGTGGT	9963	False	NA	-28	True	ATTAAA	-12	NA	141200401	141195201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420
ES.24932.70	chr4	-	2415	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-24	645	-24	-645	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGCCTTCCTTCCTGT	NA	False	NA	6	True	AATAAA	-31	NA	141327259	141304017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.72	chr4	-	1643	10	NNC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	17	-655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.603571239299	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGCGGCGACCCAGCCT	NA	False	NA	-4	True	AATAAA	-21	NA	141327182	141304027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141304380_141305064_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.73	chr4	-	2478	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-64	-656	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGCGGCGACCCAGCC	NA	False	NA	-5	True	AATAAA	-20	NA	141325599	141304028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ES.24932.74	chr4	-	2303	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	1	-661	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	517.29825475735	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGAGGTAGCGGCGACC	NA	False	NA	-10	True	AATAAA	-15	NA	141327198	141304033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323225_141327158
ES.24932.75	chr4	-	2430	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	10	661	-8	-661	multi-exon	FALSE	canonical	3	19	junction_8	521.665826343839	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGAGGTAGCGGCGACC	NA	False	NA	-10	True	AATAAA	-15	NA	141325525	141304033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ES.24932.76	chr4	-	2631	9	NNC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	122	-663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	527.600405136311	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGTGAGGTAGCGGCGA	NA	False	NA	-12	True	AATAAA	-13	NA	141327024	141304035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141326689
ES.24932.77	chr4	-	2440	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-1680	-665	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	527.600405136311	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAACGTGAGGTAGCGGC	NA	False	NA	-14	True	AATAAA	-11	NA	141329023	141304037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141328877
ES.24932.78	chr4	-	2129	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-19	926	-19	-926	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTAGCCATGTCTAATG	NA	False	NA	NA	False	NA	NA	NA	141327254	141304298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.79	chr4	-	2152	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-21	-939	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAATTTA	NA	False	NA	NA	False	NA	NA	NA	141325556	141304311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ES.24932.8	chr4	-	12236	15	FSM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	-157	3	-9	-3	multi-exon	FALSE	canonical	3	15	junction_6	23.4699112630167	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTCAGGTGTGAAGGTG	NA	False	NA	-30	True	ATTAAA	-10	NA	141265917	141195203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.80	chr4	-	1890	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-6	1152	-6	-1152	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGGGGCTGCGAAGATG	NA	False	NA	53	True	AGTAAA	-13	NA	141327241	141304524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.81	chr4	-	5649	8	ISM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	70	1216	-19	-1216	intron_retention	FALSE	canonical	3	1168	junction_5	184.331002187226	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGAATTTTTCTCT	NA	False	NA	-11	True	NA	NA	NA	141327165	141304588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
ES.24932.82	chr4	-	1908	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-1699	-1216	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	527.600405136311	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGAATTTTTCTCT	NA	False	NA	-11	True	NA	NA	NA	141329042	141304588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141328877
ES.24932.83	chr4	-	1866	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-42	-1246	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATATTCTTTGGATT	NA	False	NA	-41	True	NA	NA	NA	141325577	141304618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
ES.24932.84	chr4	-	1853	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	2	1246	2	-1246	multi-exon	FALSE	canonical	3	19	junction_8	521.665826343839	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATATTCTTTGGATT	NA	False	NA	-41	True	NA	NA	NA	141325533	141304618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ES.24932.85	chr4	-	1787	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	-5	-1246	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	521.977968883745	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATATTCTTTGGATT	NA	False	NA	-41	True	NA	NA	NA	141327204	141304618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323288_141327158
ES.24932.86	chr4	-	1802	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	-2	-1246	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATATTCTTTGGATT	NA	False	NA	-41	True	NA	NA	NA	141327345	141304618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
ES.24932.87	chr4	-	1667	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	32	1337	-4	-1337	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATAGCACACACCTTT	NA	False	NA	-132	True	AATATA	-13	NA	141327203	141304709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.88	chr4	-	1425	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	-24	1635	-24	-1635	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGGGCTTTGGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	141327259	141305007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.89	chr4	-	1281	1	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	14500	-4627	mono-exon	FALSE	NA	NA	NA	NA	NA	1262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATAGGTGGCAAACTGG	NA	False	NA	NA	False	NA	NA	NA	141309280	141307999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141308000_141309300
ES.24932.9	chr4	-	12196	16	NNC	ENSMUSG00000040761.17	novel	12299	16	NA	NA	-61	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.5261086384553	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAACACCTCA	NA	False	NA	-42	True	NA	NA	NA	141265821	141195215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208121_141211031_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ES.24932.90	chr4	-	1190	8	NNC	ENSMUSG00000006219.13	novel	956	7	NA	NA	2	-5349	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	554.119047107521	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAATT	NA	False	NA	NA	False	AATAAA	-13	NA	141327233	141308721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141308878_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.91	chr4	-	1866	6	ISM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	41	7584	5	5652	5prime_fragment	FALSE	canonical	3	1168	junction_2	241.947597632215	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTAATGTGTAAGGATT	NA	False	NA	NA	False	AATAAA	-29	NA	141327194	141310956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.92	chr4	-	1804	5	ISM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	54	12065	18	1171	5prime_fragment	FALSE	canonical	3	1168	junction_1	236.277908404489	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTATTTGTTTACTT	NA	False	NA	NA	False	AATAAA	-19	NA	141327181	141315437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ES.24932.93	chr4	-	4241	4	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-45	184	intron_retention	FALSE	canonical	3	77	junction_1	16.391054470859	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGTTGTCTTGTACTC	NA	False	NA	NA	False	NA	NA	NA	141345337	141340502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141344781_141344950_141345024_141345209
ES.24932.94	chr4	-	3217	4	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	-58	4	intron_retention	FALSE	canonical	3	77	junction_1	16.391054470859	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGAGGATCACAGTGGCA	NA	False	NA	0	True	AATAAA	-20	NA	141345350	141341539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141344781_141344950_141345024_141345209
ES.24932.95	chr4	-	2708	4	NIC	ENSMUSG00000043085.15	novel	1671	6	NA	NA	-56	0	intron_retention	FALSE	canonical	3	69	junction_2	17.2819751957543	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345348	141341543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141342018_141342255_141343933_141344605_141345024_141345209
ES.24932.96	chr4	-	3629	2	NIC	ENSMUSG00000043085.15	novel	1671	6	NA	NA	-66	0	intron_retention	FALSE	canonical	3	109	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345358	141341543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141345024_141345209
ES.24932.97	chr4	-	1471	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	199	1	-58	-1	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCGTTGAGGATCACAG	NA	False	NA	-5	True	AATAAA	-15	NA	141345350	141341544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ES.24932.98	chr4	-	2666	4	NIC	ENSMUSG00000043085.15	novel	2478	5	NA	NA	52	2	intron_retention	FALSE	canonical	3	69	junction_1	20.138409955991	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345240	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141343933_141344605_141344781_141344950_141345024_141345209
ES.24932.99	chr4	-	1420	6	FSM	ENSMUSG00000043085.15	ENSMUST00000143154.8	2898	6	619	859	-33	2	multi-exon	FALSE	canonical	3	10	junction_2	37.2526509123847	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGTTGAGGATCACA	NA	False	NA	-6	True	AATAAA	-14	NA	141345325	141341545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141342018_141342255_141342422_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ES.24933.1	chr4	-	2678	5	FSM	ENSMUSG00000040740.8	ENSMUST00000038661.8	2670	5	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCAATTGCCCTCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	141351140	141346134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141347906_141348688_141348824_141349514_141349668_141349752_141349819_141350587
ES.24934.1	chr4	+	2888	2	Antisense	novelGene_ENSMUSG00000028917.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	141382122	141385405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141382623_141383017
ES.24935.1	chr4	-	3876	19	NNC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	-732	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	9.24044384589484	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCGCTGACCCTCTTT	5798	False	NA	0	True	AATAAA	-21	NA	141392942	141353043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141392885
ES.24935.12	chr4	-	4207	11	NIC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	-3246	-3	intron_retention	FALSE	canonical	3	22	junction_3	5.11468474101777	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	NA	False	NA	-4	True	AATAAA	-17	NA	141361604	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141356458_141356760_141356952_141357220_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563
ES.24935.13	chr4	-	2175	6	NIC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	352	-3	intron_retention	FALSE	canonical	3	32	junction_5	2.99332590941915	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	NA	False	NA	-4	True	AATAAA	-17	NA	141358006	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141354019_141355061_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882
ES.24935.14	chr4	-	4602	17	NNC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-26	-3	intron_retention	FALSE	canonical	1	1	junction_4	10.1519702521235	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	7285	False	NA	-4	True	AATAAA	-17	NA	141391455	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355691_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.15	chr4	-	3989	18	NIC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	9.75548820782489	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	7285	False	NA	-4	True	AATAAA	-17	NA	141391455	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369960_141370068_141391171
ES.24935.16	chr4	-	5712	19	NIC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	-25	-3	intron_retention	FALSE	canonical	2	5	junction_14	10.0235833025033	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	7286	False	NA	-4	True	AATAAA	-17	NA	141391454	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141364735_141364796_141366986_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.17	chr4	-	4187	18	NIC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-33	-3	intron_retention	FALSE	canonical	3	16	junction_17	6.7521622834267	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	7278	False	NA	-4	True	AATAAA	-17	NA	141391462	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141354019_141355061_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.18	chr4	-	4062	19	NNC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-17	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	9.24044384589484	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTGATGTTATATT	7294	False	NA	-26	True	NA	NA	NA	141391446	141353069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370062_141391171
ES.24935.19	chr4	-	3647	1	NIC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	-17	2751	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	141369523	141365876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141365900_141369500
ES.24935.2	chr4	-	3574	16	NNC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.75841517187431	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCGCTGACCCTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	141369103	141353044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369030
ES.24935.20	chr4	-	166	1	Intergenic	novelGene_20565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTTTTTTAAATTTAA	9173	False	NA	NA	False	NA	NA	NA	141389567	141389401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141389400_141389600
ES.24935.4	chr4	-	4434	19	ISM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	422	1	-359	-1	3prime_fragment	FALSE	canonical	3	16	junction_18	6.60363723196225	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCGCTGACCCTCT	6952	False	NA	-2	True	AATAAA	-19	NA	141391788	141353045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.5	chr4	-	3994	18	NNC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	-9606	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.9699739689194	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	NA	False	NA	-3	True	AATAAA	-18	NA	141379679	141353046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141379436
ES.24935.7	chr4	-	4713	20	FSM	ENSMUSG00000028917.15	ENSMUST00000084203.11	4136	20	-579	2	202	-2	multi-exon	FALSE	canonical	2	5	junction_14	9.89893527949294	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	6732	False	NA	-3	True	AATAAA	-18	NA	141392008	141353046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141364735_141364796_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.8	chr4	-	4448	18	NNC	ENSMUSG00000028917.15	novel	4154	20	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_4	11.9904806533174	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	7291	False	NA	-3	True	AATAAA	-18	NA	141391449	141353046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355440_141355591_141355752_141356391_141356553_141356760_141356952_141357220_141357354_141357704_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ES.24935.9	chr4	-	5676	13	NNC	ENSMUSG00000028917.15	novel	4136	20	NA	NA	5301	-3	intron_retention	FALSE	canonical	0	0	junction_12	10.2262597702625	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGTCGCTGACCCT	NA	False	NA	-4	True	AATAAA	-17	NA	141364205	141353047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141354019_141355061_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141362814_141362857
ES.24936.1	chr4	-	169	1	Intergenic	novelGene_20566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAGTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	141402042	141401873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141401900_141402000
ES.24937.1	chr4	+	2147	1	Antisense	novelGene_ENSMUSG00000078515.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCATGGTGGCACAC	450	False	NA	NA	False	NA	NA	NA	141421227	141423374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_141421200_141423400
ES.24938.1	chr4	+	1653	1	Intergenic	novelGene_20569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAACAAAAAAAA	1366	False	NA	NA	False	AGTAAA	-4	NA	141427780	141429433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141427800_141429400
ES.24939.1	chr4	-	4833	1	ISM	ENSMUSG00000078515.5	ENSMUST00000102484.5	9553	10	41036	2	41036	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTGATCTGCTTCT	6338	False	NA	-1	True	AATAAA	-14	NA	141409694	141404861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141404900_141409700
ES.24939.10	chr4	-	6374	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-2	-2833	-2	2833	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGTTATTGATAACTA	NA	False	NA	NA	False	AATAAA	-18	NA	141450732	141408040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.11	chr4	-	5929	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-2	-2388	-2	2388	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATTTTCTTGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	141450732	141408485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.12	chr4	-	5429	8	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-44	2103	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	76.2297815281976	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTTTTGTCTGAAGTT	NA	False	NA	NA	False	TTTAAA	-10	NA	141450774	141408770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141422717_141422817_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.13	chr4	-	5583	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-41	-2003	-41	2003	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACATACCGTTCATTCT	NA	False	NA	NA	False	NA	NA	NA	141450771	141408870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.14	chr4	-	4669	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-43	-1087	-43	1087	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTGCCTAAAAGTCAC	NA	False	NA	NA	False	ATTAAA	-40	NA	141450773	141409786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.16	chr4	-	4323	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-58	-726	-58	726	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTGGTGCAGTCTTC	NA	False	NA	NA	False	AATACA	-19	NA	141450788	141410147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.18	chr4	-	3596	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-54	-3	-54	3	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGAATGAGTGAGTGC	NA	False	NA	-3	True	AATAAA	-27	NA	141450784	141410870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.2	chr4	-	1204	2	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	44608	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTTTGATCTGCTT	9910	False	NA	-3	True	AATAAA	-12	NA	141406122	141404863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141405269_141405323
ES.24939.20	chr4	-	3714	11	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	81.4371536830702	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGAATGAGTGA	NA	False	NA	-7	True	AATAAA	-23	NA	141450757	141410874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141436576_141436726_141440707_141440838_141450367
ES.24939.21	chr4	-	3503	9	NIC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	67.453571995855	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGAATGAGTGA	NA	False	NA	-7	True	AATAAA	-23	NA	141450757	141410874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141412943_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.23	chr4	-	3563	10	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.9479252207118	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATTTTAGAATGAGTGA	NA	False	NA	-7	True	AATAAA	-23	NA	141450771	141410874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430535_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.24	chr4	-	3495	10	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	62.8366488957236	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	NA	False	NA	-8	True	AATAAA	-22	NA	141450760	141410875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416580_141416643_141419565_141419684_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.25	chr4	-	6370	3	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	29695	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	116.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	4550	False	NA	-8	True	AATAAA	-22	NA	141421035	141410875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416580_141416696_141416847
ES.24939.26	chr4	-	4876	5	ISM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	22237	2	22237	-2	3prime_fragment	FALSE	canonical	3	179	junction_2	22.0836477965032	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	7582	False	NA	-8	True	AATAAA	-22	NA	141428493	141410875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040
ES.24939.28	chr4	-	3753	11	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-14	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	78.7004447255541	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	NA	False	NA	-8	True	AATAAA	-22	NA	141450744	141410875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141413487_141413690_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.29	chr4	-	8653	10	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-4	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	82.3804783299814	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTTAGAATGAGTG	NA	False	NA	-8	True	AATAAA	-22	NA	141450734	141410875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412241_141412861_141412943_141416580_141416696_141416847_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.3	chr4	-	6806	10	FSM	ENSMUSG00000078515.5	ENSMUST00000102484.5	9553	10	-2	2749	-2	-2749	multi-exon	TRUE	canonical	3	149	junction_7	26.8842971285984	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTGTAATTTCCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	141450732	141407608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.30	chr4	-	3490	11	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5125971756785	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACCATTTTAGAATGAGT	NA	False	NA	-9	True	AATAAA	-21	NA	141450758	141410876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367_141450581_141450654
ES.24939.31	chr4	-	6825	3	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	32471	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACCATTTTAGAATGAG	7326	False	NA	-10	True	AATAAA	-20	NA	141418259	141410877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141414843_141415247_141416696_141416847
ES.24939.32	chr4	-	3702	10	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-47	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.7146416105086	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACCATTTTAGAATGAG	NA	False	NA	-10	True	AATAAA	-20	NA	141450777	141410877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141416460_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.33	chr4	-	3433	9	NIC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-27	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	68.7527272186347	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACCATTTTAGAATGAG	NA	False	NA	-10	True	AATAAA	-20	NA	141450757	141410877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.34	chr4	-	3663	10	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.343294020829	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATACCATTTTAGAATGAG	NA	False	NA	-10	True	AATAAA	-20	NA	141450771	141410877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412943_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141436576_141436726_141440707_141440838_141450367
ES.24939.35	chr4	-	3428	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-17	128	-17	-128	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTCTATTCTACTTG	NA	False	NA	NA	False	NA	NA	NA	141450747	141411001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.36	chr4	-	176	1	Intergenic	novelGene_20567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9527	False	NA	NA	False	NA	NA	NA	141415052	141414876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141414900_141415100
ES.24939.37	chr4	-	133	1	Intergenic	novelGene_20568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9331	False	NA	NA	False	NA	NA	NA	141415248	141415115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141415100_141415200
ES.24939.4	chr4	-	6546	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	-31	-2976	-31	2976	multi-exon	FALSE	canonical	3	149	junction_7	26.8842971285984	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGGGTTTTTT	NA	False	NA	1	True	AATAAA	-44	NA	141450761	141407897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.24939.6	chr4	-	6663	11	NNC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-2	2975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.971006513358	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTGTGGGTTTTT	NA	False	NA	0	True	AATAAA	-43	NA	141450732	141407898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141412941_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141436576_141436726_141440707_141440838_141450367
ES.24939.7	chr4	-	6270	8	NIC	ENSMUSG00000078515.5	novel	9553	10	NA	NA	-13	2970	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	64.2599948550847	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATTTTGTTTTGTGGG	NA	False	NA	-5	True	AATAAA	-38	NA	141450743	141407903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141412943_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ES.2494.1	chr10	-	266	1	Intergenic	novelGene_1891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAGATTAACCAGAGGG	NA	False	NA	NA	False	NA	NA	NA	25224214	25223948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25223900_25224200
ES.24940.1	chr4	+	172	1	Intergenic	novelGene_20570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9233	False	NA	NA	False	NA	NA	NA	141453918	141454090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141453900_141454100
ES.24941.1	chr4	+	1374	7	FSM	ENSMUSG00000040706.5	ENSMUST00000038161.5	1407	7	32	1	32	-1	multi-exon	FALSE	canonical	1	3	junction_5	1.49071198499986	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGCCTGTGGAGTTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	141474014	141486573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141474411_141476885_141477089_141482135_141482185_141483109_141483306_141484696_141484877_141485649_141485735_141486308
ES.24942.1	chr4	-	175	1	Intergenic	novelGene_20571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTGTA	NA	False	NA	NA	False	NA	NA	NA	141480922	141480747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141480700_141480900
ES.24943.1	chr4	-	5781	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	189	-1	189	1	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGGGGCACCTCTG	NA	False	NA	-11	True	AATAAA	-16	NA	141518013	141487498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.10	chr4	-	2559	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	215	3195	215	-3195	multi-exon	FALSE	canonical	3	44	junction_12	6.2974727681274	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAACATCTTCCTTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	141517987	141490694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.11	chr4	-	2981	13	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	5202	204	4685	5prime_fragment	FALSE	canonical	3	44	junction_10	6.54896090146283	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAGAACACACTCTC	NA	False	NA	NA	False	NA	NA	NA	141517998	141492701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.12	chr4	-	4963	9	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	242	4685	intron_retention	FALSE	canonical	3	44	junction_6	6.87272689694564	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAGAACACACTCTC	NA	False	NA	NA	False	NA	NA	NA	141517960	141492701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141495385_141497163_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.13	chr4	-	1482	3	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	6710	4685	intron_retention	FALSE	canonical	3	45	junction_1	1.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAGAACACACTCTC	NA	False	NA	NA	False	NA	NA	NA	141495254	141492701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141494054_141495018_141495096_141495201
ES.24943.14	chr4	-	3981	11	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	215	4652	intron_retention	FALSE	canonical	3	44	junction_8	6.61513416341649	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141517987	141492734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.15	chr4	-	5413	4	ISM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	232	17827	232	5050	5prime_fragment	FALSE	canonical	3	44	junction_1	8.9566858950296	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTTCCCAAGGGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	141517970	141505326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.2	chr4	-	4254	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	242	1473	242	-1473	multi-exon	FALSE	canonical	3	44	junction_12	6.2974727681274	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAGATGTTTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	141517960	141488972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.3	chr4	-	4201	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	-30	1798	10	-1798	multi-exon	FALSE	canonical	3	44	junction_12	6.2974727681274	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCTTCATTCTTCCA	NA	False	NA	NA	False	ATTAAA	-16	NA	141518232	141489297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.4	chr4	-	5698	14	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	215	-1801	intron_retention	FALSE	canonical	3	44	junction_11	6.45054009022665	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCAGGCTTCATTCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	141517987	141489300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141491206_141491878_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.6	chr4	-	3877	14	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	224	-1801	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	14.568345355274	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCAGGCTTCATTCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	141517978	141489300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141516199_141516385_141517900
ES.24943.7	chr4	-	3923	15	NNC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	250	-1806	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.9366007115517	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACACTGCCAGGCTTCA	NA	False	NA	NA	False	ATTAAA	-8	NA	141517952	141489305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495008_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.8	chr4	-	4006	14	NIC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	226	-1816	intron_retention	FALSE	canonical	3	44	junction_11	6.53438787126009	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAAGAAAACACTG	NA	False	NA	NA	False	NA	NA	NA	141517976	141489315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141491206_141491878_141492050_141493794_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24943.9	chr4	-	3947	15	NNC	ENSMUSG00000040697.11	novel	5969	15	NA	NA	205	-1816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.977023218577	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAAGAAAACACTG	NA	False	NA	NA	False	NA	NA	NA	141517997	141489315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141491197_141491870_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ES.24944.1	chr4	-	365	1	Intergenic	novelGene_20572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTAATTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	141520254	141519889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141519900_141520300
ES.24944.2	chr4	-	174	1	Intergenic	novelGene_20573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGTAATTGAACAAG	NA	False	NA	NA	False	NA	NA	NA	141520254	141520080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141520100_141520300
ES.24945.1	chr4	+	3555	9	NNC	ENSMUSG00000028914.14	novel	854	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.2912076025952	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141520878	141543287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141520919_141523752_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.10	chr4	+	2213	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-42	657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.5389492289435	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATTTAGCCTGTATTG	NA	False	NA	5	True	AATAAA	-15	NA	141521112	141541655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141521298_141521680_141521819_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.11	chr4	+	3161	10	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-42	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	59.4165043372153	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141521112	141543285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905_141542536_141543079
ES.24945.12	chr4	+	4394	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	194	-691	-38	691	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	141521116	141543978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.13	chr4	+	1417	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	195	2285	-37	4	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCTGCTCTCTGCCTCA	NA	False	NA	NA	False	AAAAAG	-26	NA	141521117	141541002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.15	chr4	+	2980	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.6357267460751	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTCCCATGTTGGCA	NA	False	NA	30	True	AATAAA	-43	NA	141521144	141543278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905_141542394_141543079
ES.24945.17	chr4	+	5532	6	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	9075	2	8843	-2	intron_retention	FALSE	canonical	3	179	junction_4	10.5565145763173	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGGCATTTTTCC	NA	False	NA	37	True	AATAAA	-19	NA	141529997	141543285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517
ES.24945.18	chr4	+	4063	2	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	17814	0	-3332	0	intron_retention	FALSE	canonical	3	198	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141538736	141543287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_141539030_141539517
ES.24945.3	chr4	+	3920	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	-23	0	-23	0	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141520899	141543287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.5	chr4	+	2187	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	84	1626	-14	663	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTGTATTGTCCCTA	NA	False	NA	11	True	AATAAA	-21	NA	141521006	141541661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.6	chr4	+	3932	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.5389492289435	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCATGTTGGCATTTTT	NA	False	NA	35	True	AATAAA	-17	NA	141521021	141543283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141521298_141521680_141521819_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.8	chr4	+	3020	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	119	758	21	-758	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGTATGTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	141521041	141542529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ES.24945.9	chr4	+	3095	10	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	-42	2298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.1451695853446	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTATTTAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141521112	141545585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905_141542536_141545442
ES.24946.1	chr4	-	864	5	ISM	ENSMUSG00000058579.6	ENSMUST00000102481.4	1070	8	4124	1	-2834	-1	3prime_fragment	FALSE	canonical	3	8	junction_3	47.6622229863442	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGAATGAGTCTGTCT	NA	False	NA	-3	True	AATAAA	-17	NA	141549347	141542273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141542367_141545175_141545329_141546292_141546439_141548635_141548773_141549012
ES.24947.1	chr4	-	2409	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-21	-7	-21	7	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGAGCACTGTTTTTGA	3855	False	NA	-6	True	NA	NA	NA	141602252	141585445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ES.24947.10	chr4	-	172	1	Intergenic	novelGene_20575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAGAAAAAAG	9836	False	NA	NA	False	NA	NA	NA	141596271	141596099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141596100_141596300
ES.24947.2	chr4	-	2501	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-311	191	-311	-191	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTGGTTTTTGAT	3565	False	NA	-1	True	GATAAA	-14	NA	141602542	141585643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ES.24947.3	chr4	-	2826	2	ISM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	13093	191	13093	-191	intron_retention	FALSE	canonical	3	551	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTGGTTTTTGAT	9099	False	NA	-1	True	GATAAA	-14	NA	141589138	141585643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141587190_141587858
ES.24947.4	chr4	-	2194	4	NNC	ENSMUSG00000040659.4	novel	2381	4	NA	NA	-10	-191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.312014512977	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTGGTTTTTGAT	3866	False	NA	-1	True	GATAAA	-14	NA	141602241	141585643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141587184_141587858_141587994_141589115_141589264_141601870
ES.24947.5	chr4	-	2081	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-22	322	-22	-322	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGCATTTTATTTTT	3854	False	NA	-29	True	TATAAA	-16	NA	141602253	141585774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ES.24947.6	chr4	-	1844	5	NNC	ENSMUSG00000040659.4	novel	2381	4	NA	NA	2	-322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	221.584492914103	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGCATTTTATTTTT	3878	False	NA	-29	True	TATAAA	-16	NA	141602229	141585774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870_141601915_141602127
ES.24947.7	chr4	-	1837	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	-9	553	-9	-553	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCGTGTCACTGCTTGT	3867	False	NA	NA	False	NA	NA	NA	141602240	141586005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ES.24947.8	chr4	-	895	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	15	1471	15	-1471	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCCGATCTCATTCA	3891	False	NA	NA	False	ACTAAA	-14	NA	141602216	141586923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ES.24947.9	chr4	-	134	1	Intergenic	novelGene_20574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	9412	False	NA	NA	False	NA	NA	NA	141592295	141592161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141592200_141592300
ES.24948.1	chr4	+	173	1	Intergenic	novelGene_20576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141687849	141688022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141687800_141688000
ES.24949.1	chr4	-	2816	12	NIC	ENSMUSG00000051435.12	novel	4263	32	NA	NA	-20	625	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.63782972135042	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCATTTCTGTTGGTGT	3696	False	NA	NA	False	AATAAA	-21	NA	141660420	141617123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141618273_141636289_141636418_141637043_141637174_141643243_141643371_141643703_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141655690_141655796_141656840_141656949_141660103
ES.24949.10	chr4	-	7115	19	ISM	ENSMUSG00000051435.12	ENSMUST00000105780.8	4809	33	-42	33414	-27	4536	5prime_fragment	FALSE	canonical	0	0	junction_3	3.23560439523579	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	1077	False	NA	NA	False	NA	NA	NA	141742420	141651162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141655796_141656840_141656949_141660103_141660212_141666331_141666470_141667367_141667439_141678792_141678989_141681352_141681503_141682603_141682688_141684885_141684994_141690723_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.11	chr4	-	1868	3	ISM	ENSMUSG00000051435.12	ENSMUST00000036701.8	1366	8	7	10726	7	1373	5prime_fragment	FALSE	canonical	3	9	junction_2	1	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGACAAGCTAGTAAT	3723	False	NA	NA	False	NA	NA	NA	141660393	141654325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141655796_141656840_141656949_141660103
ES.24949.12	chr4	-	2768	10	ISM	ENSMUSG00000051435.12	ENSMUST00000105780.8	4809	33	-17	71701	-2	736	5prime_fragment	FALSE	canonical	0	0	junction_4	2.48451997499977	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCACAGTCATGGCAATA	1102	False	NA	NA	False	AATAAA	-30	NA	141742395	141689449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.13	chr4	-	2501	10	ISM	ENSMUSG00000051435.12	ENSMUST00000105780.8	4809	33	-17	71968	-2	469	5prime_fragment	FALSE	canonical	0	0	junction_4	2.48451997499977	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1102	False	NA	NA	False	NA	NA	NA	141742395	141689716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.2	chr4	-	1053	7	NNC	ENSMUSG00000051435.12	novel	4263	32	NA	NA	1657	7613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.96818165345562	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCCAAAGTCTGCTGT	4387	False	NA	NA	False	NA	NA	NA	141648080	141635986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141636418_141637043_141637174_141643243_141643371_141643723_141643864_141645584_141645692_141646058_141646144_141648047
ES.24949.4	chr4	-	1239	7	NIC	ENSMUSG00000051435.12	novel	1366	8	NA	NA	-54	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	5.16397779494322	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAATGATAGTGTTTCA	3662	False	NA	NA	False	AGTAAA	-22	NA	141660454	141643606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141655690_141655796_141656840_141656949_141660103
ES.24949.6	chr4	-	3498	24	NNC	ENSMUSG00000051435.12	novel	4809	33	NA	NA	14	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	4.64302228668261	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATGAATGATAGTGTTT	1133	False	NA	NA	False	AGTAAA	-20	NA	141742364	141643608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141655690_141655796_141656840_141656949_141660103_141660212_141666331_141666470_141667367_141667439_141678792_141678989_141681352_141681623_141682603_141682688_141684885_141684994_141690723_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.7	chr4	-	3194	22	NIC	ENSMUSG00000051435.12	novel	4809	33	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4.43087497693452	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATGAATGATAGTGTTT	1104	False	NA	NA	False	AGTAAA	-20	NA	141742393	141643608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141660103_141660212_141666331_141666470_141667367_141667439_141678792_141678989_141681352_141681503_141682603_141682688_141684885_141684994_141690723_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.8	chr4	-	3380	24	NNC	ENSMUSG00000051435.12	novel	4809	33	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4.54425830624484	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATACATGAATGATAGT	1123	False	NA	NA	False	AGTAAA	-16	NA	141742374	141643612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141655690_141655796_141656840_141656949_141660103_141660185_141666308_141666470_141667367_141667439_141678792_141678989_141681352_141681503_141682603_141682688_141684885_141684994_141690723_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.24949.9	chr4	-	3406	24	ISM	ENSMUSG00000051435.12	ENSMUST00000105780.8	4809	33	-19	25865	-4	-14	5prime_fragment	FALSE	canonical	0	0	junction_8	4.54425830624484	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGATACATGAATGATAG	1100	False	NA	NA	False	AGTAAA	-15	NA	141742397	141643613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141643864_141645584_141645692_141646058_141646144_141648047_141648274_141649554_141649729_141655690_141655796_141656840_141656949_141660103_141660212_141666331_141666470_141667367_141667439_141678792_141678989_141681352_141681503_141682603_141682688_141684885_141684994_141690723_141690829_141691895_141691986_141700099_141700231_141701590_141701715_141709458_141709702_141712786_141712897_141718410_141718652_141729701_141729909_141738855_141738963_141742259
ES.2495.1	chr10	+	4398	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	-9	-4	-9	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235686	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.11	chr10	+	4043	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	8	1	intron_retention	FALSE	canonical	2	17	junction_13	85.6535308306085	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235703	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.12	chr10	+	4055	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	14	1	intron_retention	FALSE	canonical	0	0	junction_3	91.4610572866944	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235709	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.13	chr10	+	3999	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	18	0	intron_retention	FALSE	canonical	1	5	junction_15	133.243951522326	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235713	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378037_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.14	chr10	+	4053	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	27	0	intron_retention	FALSE	canonical	1	7	junction_14	86.6349200669107	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235722	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25383674_25383756_25388870_25388980_25398194
ES.2495.15	chr10	+	4053	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	85.5897658875835	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235722	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25377810_25377903_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.16	chr10	+	4586	20	NNC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.985416731554	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235722	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25344619_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25377810_25377903_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.17	chr10	+	4198	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-28	1	intron_retention	FALSE	canonical	2	7	junction_12	107.189243633012	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235725	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.18	chr10	+	4136	18	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-27	1	intron_retention	FALSE	canonical	0	0	junction_13	88.3718551071918	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235726	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380041_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.2	chr10	+	4250	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	-67	-68	-9	62	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGCATTTTTACAAAATA	NA	False	NA	NA	False	AATAAA	-28	NA	25235686	25399479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.20	chr10	+	3652	18	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-24	1	intron_retention	FALSE	canonical	0	0	junction_1	140.898820110924	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235729	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.21	chr10	+	4303	22	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_16	140.004616056067	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235735	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377475_25377530_25377721_25377810_25377903_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.23	chr10	+	3595	18	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	133.179614388169	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25235767	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347537_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.24	chr10	+	3640	14	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	14	1	intron_retention	FALSE	canonical	0	0	junction_1	152.357878289648	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235767	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25268160_25268230_25317470_25317956_25319639_25319853_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.26	chr10	+	4528	22	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_14	141.669507774632	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235772	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25375673_25375842_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.27	chr10	+	3727	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	19	0	intron_retention	FALSE	canonical	1	5	junction_13	88.2535188746035	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25235772	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378037_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.28	chr10	+	3611	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	20	1	intron_retention	FALSE	canonical	0	0	junction_1	91.0953312469964	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235773	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.29	chr10	+	3736	21	NNC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_20	131.0007156469	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235773	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194_25398237_25398811
ES.2495.3	chr10	+	4451	21	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-8	0	intron_retention	FALSE	canonical	3	14	junction_14	130.463203624624	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235687	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.30	chr10	+	3292	17	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	21	-3438	intron_retention	FALSE	canonical	0	0	junction_16	87.8037584616968	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGATTCTATTTATTT	NA	False	NA	NA	False	AATATA	-45	NA	25235774	25385797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25385273
ES.2495.31	chr10	+	4084	18	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_1	88.3862630044357	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25235781	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317476_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.34	chr10	+	4277	19	NNC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	39	0	intron_retention	FALSE	canonical	0	0	junction_1	113.139117357982	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25235792	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25306803_25307002_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.35	chr10	+	4143	19	NNC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	47	0	intron_retention	FALSE	canonical	0	0	junction_1	112.693071637354	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235800	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25268160_25268230_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.36	chr10	+	4041	18	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_7	88.5544424258682	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235801	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347510_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.37	chr10	+	4506	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	173	1	intron_retention	FALSE	canonical	0	0	junction_1	128.033512202523	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235926	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25236389_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.38	chr10	+	4448	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	176	0	intron_retention	FALSE	canonical	0	0	junction_1	88.3862630044357	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235929	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25236389_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.39	chr10	+	4105	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	17726	1	intron_retention	FALSE	canonical	0	0	junction_1	88.3862630044357	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25253479	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25253595_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.4	chr10	+	4383	20	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-7	0	intron_retention	FALSE	canonical	2	9	junction_12	122.754512585529	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235688	25399413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.40	chr10	+	4219	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16522	0	intron_retention	FALSE	canonical	3	32	junction_1	81.6001306057711	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25258034	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.41	chr10	+	4044	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16505	0	intron_retention	FALSE	canonical	1	6	junction_1	87.1045587340246	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25258051	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25258107_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.42	chr10	+	4371	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16478	1	intron_retention	FALSE	canonical	2	9	junction_12	135.67592151399	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25258078	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.43	chr10	+	4056	17	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16468	0	intron_retention	FALSE	canonical	1	7	junction_14	127.521796543767	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25258088	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25383674_25383756_25388870_25388980_25398198
ES.2495.44	chr10	+	4346	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16444	1	intron_retention	FALSE	canonical	3	27	junction_12	131.056267123532	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25258112	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.45	chr10	+	4501	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14855	0	intron_retention	FALSE	canonical	1	3	junction_1	109.178187121833	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25259701	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25259900_25260309_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.46	chr10	+	4082	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14824	20	intron_retention	FALSE	canonical	3	44	junction_1	79.0900236054462	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTGAAATAAACTGGG	NA	False	NA	NA	False	AATAAA	-40	NA	25259732	25399437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.47	chr10	+	3934	17	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14824	1	intron_retention	TRUE	canonical	2	17	junction_13	107.465692199883	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25259732	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.48	chr10	+	4255	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14816	0	intron_retention	FALSE	canonical	2	9	junction_12	134.553576020649	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25259740	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.49	chr10	+	7707	16	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14815	1	intron_retention	TRUE	canonical	0	0	junction_1	91.691996500361	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25259741	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259795_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.5	chr10	+	4333	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-7	0	intron_retention	FALSE	canonical	2	9	junction_12	105.482562481456	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235688	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.50	chr10	+	4257	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14815	0	intron_retention	FALSE	canonical	3	27	junction_12	129.882239439747	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25259741	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.51	chr10	+	4477	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14814	0	intron_retention	FALSE	canonical	1	1	junction_1	109.486173657783	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25259742	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25259800_25259877_25260309_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.52	chr10	+	4620	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14666	0	intron_retention	FALSE	canonical	3	24	junction_1	131.863397797381	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25259890	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25260309_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.53	chr10	+	4080	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14474	1	intron_retention	FALSE	canonical	0	0	junction_1	88.3862630044357	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25260082	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25260173_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.54	chr10	+	4339	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14445	0	intron_retention	FALSE	canonical	2	9	junction_12	123.707191124051	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25260111	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25260309_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.55	chr10	+	4054	18	NIC	ENSMUSG00000019978.17	novel	4280	20	NA	NA	6	-4	intron_retention	FALSE	canonical	1	1	junction_1	88.1723697198103	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATAAATGTGTCACTT	NA	False	NA	NA	False	AATAAA	-10	NA	25284271	25399407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25284341_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.56	chr10	+	4048	18	NNC	ENSMUSG00000019978.17	novel	4280	20	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_1	88.3862630044357	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25284333	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25284393_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.57	chr10	+	4467	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-177	0	intron_retention	FALSE	non_canonical	0	0	junction_1	88.3862630044357	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTCACTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	25308319	25399414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308792_25317467_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.58	chr10	+	4391	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-115	0	intron_retention	FALSE	canonical	3	30	junction_1	82.0204633087627	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25308381	25399413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25308782_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.59	chr10	+	4136	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-44	0	intron_retention	FALSE	canonical	1	10	junction_1	86.2523456378299	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308452	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308594_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.6	chr10	+	4071	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_16	87.8037584616968	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25235689	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25398194
ES.2495.60	chr10	+	4283	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-24	0	intron_retention	FALSE	canonical	3	29	junction_1	82.230833843529	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308472	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25308761_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.62	chr10	+	4170	17	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-13	0	intron_retention	FALSE	canonical	2	17	junction_13	109.570682096079	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308483	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25308782_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.63	chr10	+	4003	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_13	110.908481902985	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25308485	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308594_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25377810_25377903_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.64	chr10	+	3992	17	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-10	1	intron_retention	FALSE	canonical	0	0	junction_3	118.165651074033	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25308486	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308594_25317470_25317956_25319639_25319853_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.65	chr10	+	4135	19	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-6	0	intron_retention	FALSE	canonical	1	7	junction_12	126.787174644445	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308507	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308594_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.66	chr10	+	4209	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	12	0	intron_retention	FALSE	canonical	2	14	junction_1	85.4020007382954	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308525	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25308740_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.67	chr10	+	4096	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	1922	1	intron_retention	FALSE	canonical	1	1	junction_1	88.1723697198103	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25310435	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25310542_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.68	chr10	+	3736	4	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	1993	14649	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.680042801775	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTTATTCATCATTG	NA	False	NA	NA	False	AATAAA	-15	NA	25310506	25332566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25310673_25317470_25317956_25319639_25319853_25329694
ES.2495.7	chr10	+	3860	18	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-5	0	intron_retention	FALSE	canonical	1	5	junction_14	127.439896953976	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235690	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25378037_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.70	chr10	+	4186	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	3673	1	intron_retention	FALSE	canonical	2	17	junction_1	84.765501894454	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25312186	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25312383_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.71	chr10	+	3109	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	3684	25	intron_retention	FALSE	canonical	2	17	junction_1	84.765501894454	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTAACAGCTCTGGTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	25312197	25398346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25312383_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.72	chr10	+	6035	18	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-2373	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	129.053970631051	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25315097	25399413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25377810_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.73	chr10	+	7654	15	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	276	junction_4	38.0303986895983	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25317469	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.74	chr10	+	3535	17	NNC	ENSMUSG00000019978.17	novel	4280	20	NA	NA	402	1	intron_retention	FALSE	canonical	0	0	junction_8	90.921304399739	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25317910	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355045_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.75	chr10	+	3435	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	2224	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	141.278116397549	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25319732	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25377475_25377530_25377721_25377810_25377903_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.76	chr10	+	3501	16	NNC	ENSMUSG00000019978.17	novel	523	5	NA	NA	7882	1	intron_retention	FALSE	non_canonical	0	0	junction_1	94.0459934760056	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25325390	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25325600_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.77	chr10	+	4164	6	NIC	ENSMUSG00000019978.17	novel	4280	20	NA	NA	-1745	1	intron_retention	FALSE	canonical	3	276	junction_1	45.2212339504353	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	5068	False	NA	NA	False	AATAAA	-15	NA	25364936	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25364992_25377721_25378286_25380034_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.78	chr10	+	8356	5	NIC	ENSMUSG00000019978.17	novel	4280	20	NA	NA	2101	0	intron_retention	FALSE	canonical	3	365	junction_1	15.9902313929474	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25373479	25399417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25378286_25380034_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.79	chr10	+	8858	4	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-940	0	intron_retention	FALSE	canonical	3	10	junction_3	183.021553072005	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25374716	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25382172_25383674_25383756_25388870_25388980_25398198
ES.2495.8	chr10	+	3525	18	NNC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	-5	-3436	intron_retention	FALSE	canonical	0	0	junction_17	125.285998079909	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATTCTATTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	25235690	25385799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25385273
ES.2495.80	chr10	+	8400	5	NNC	ENSMUSG00000019978.17	novel	523	5	NA	NA	-558	1	intron_retention	FALSE	non_canonical	0	0	junction_1	169.014792252039	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	25375098	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25379298_25379378_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.81	chr10	+	7356	4	NIC	ENSMUSG00000019978.17	novel	523	5	NA	NA	567	1	intron_retention	FALSE	canonical	3	372	junction_3	13.8884444373331	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	966	False	NA	NA	False	AATAAA	-15	NA	25376223	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.82	chr10	+	3319	6	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	92331	5	940	1	3prime_fragment	FALSE	canonical	3	365	junction_1	14.319217855735	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	1339	False	NA	NA	False	AATAAA	-15	NA	25376596	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.83	chr10	+	1886	4	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-82	0	intron_retention	FALSE	canonical	0	0	junction_1	183.900939517871	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	220	False	NA	NA	False	AATAAA	-14	NA	25377806	25399411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_25378286_25383674_25383756_25388870_25388980_25398194
ES.2495.84	chr10	+	2094	5	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	95305	5	1392	1	3prime_fragment	FALSE	canonical	3	372	junction_4	12.1732288239399	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTGTCACTTCTCTT	1984	False	NA	NA	False	AATAAA	-15	NA	25379570	25399412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ES.2495.9	chr10	+	3712	5	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	-5	14650	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	150.715792138714	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTATTCATCATTGT	NA	False	NA	NA	False	AATAAA	-16	NA	25235690	25332567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25329694_25330858_25330905
ES.24950.1	chr4	+	634	2	FSM	ENSMUSG00000085761.2	ENSMUST00000126231.2	630	2	-1	-3	-1	3	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGTAAAGTTCTGTTA	NA	False	NA	NA	False	CATAAA	-15	NA	141745207	141756310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141745442_141755910
ES.24951.1	chr4	+	2286	3	NIC	ENSMUSG00000073728.11	novel	675	4	NA	NA	-20	1	intron_retention	FALSE	canonical	3	10	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCCCCAAAACCTCAC	NA	False	NA	NA	False	NA	NA	NA	141811262	141815389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141813043_141813690_141813870_141815062
ES.24951.2	chr4	+	3819	2	NNC	ENSMUSG00000073728.11	novel	3440	2	NA	NA	-19	21	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATCTATTGCCACTGG	NA	False	NA	NA	False	AAAAAG	-13	NA	141811263	141815431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141813136_141813484
ES.24951.3	chr4	+	3475	2	FSM	ENSMUSG00000073728.11	ENSMUST00000153023.2	3440	2	-16	-19	-16	1	multi-exon	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACCCCCAAAACCTCAC	NA	False	NA	NA	False	NA	NA	NA	141811266	141815389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_141813043_141813690
ES.24951.5	chr4	+	2324	3	NIC	ENSMUSG00000073728.11	novel	1667	5	NA	NA	-9	-7	intron_retention	FALSE	canonical	0	0	junction_1	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141811273	141815356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_141813125_141813690_141813870_141815062
ES.24951.6	chr4	+	2519	3	NNC	ENSMUSG00000073728.11	novel	675	4	NA	NA	-9	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141811273	141815356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141813134_141813504_141813870_141815062
ES.24951.7	chr4	+	1535	4	NNC	ENSMUSG00000073728.11	novel	675	4	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.24933858267454	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAACTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141811273	141815356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_141812286_141812991_141813042_141813690_141813870_141815062
ES.24952.1	chr4	-	6033	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	72	-4230	72	4230	multi-exon	FALSE	canonical	3	173	junction_2	4	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCAATCAATCAATCAA	9872	False	NA	NA	False	NA	NA	NA	141811543	141754072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141759406_141764715_141765245_141811372
ES.24952.2	chr4	-	4414	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-370	2592	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGTTCCTGATAAATT	9830	False	NA	NA	False	ATTAAA	-23	NA	141811985	141755710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141759406_141764715_141765245_141811795
ES.24952.3	chr4	-	4388	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	74	-2587	74	2587	multi-exon	FALSE	canonical	3	173	junction_2	4	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCTCTTGTTCCTGAT	9874	False	NA	NA	False	ATTAAA	-18	NA	141811541	141755715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141759406_141764715_141765245_141811372
ES.24952.4	chr4	-	2672	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	71	-868	71	868	multi-exon	FALSE	canonical	3	173	junction_2	4	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAGGAAGCCAGAAAGC	9871	False	NA	NA	False	NA	NA	NA	141811544	141757434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141759406_141764715_141765245_141811372
ES.24952.5	chr4	-	2046	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	-170	-1	-170	1	multi-exon	FALSE	canonical	3	173	junction_2	4	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACCTCATTCAGTCAT	9977	False	NA	-5	True	AATAAA	-19	NA	141811785	141758301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141759406_141764715_141765245_141811372
ES.24952.6	chr4	-	1754	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	8032	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGACCTCATTCAGTC	NA	False	NA	-7	True	AATAAA	-17	NA	141803583	141758303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141759406_141764715_141765245_141803460
ES.24952.7	chr4	-	2035	3	NNC	ENSMUSG00000040616.4	novel	1875	3	NA	NA	-584	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	75.5	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGACCTCATTCAGTC	9616	False	NA	-7	True	AATAAA	-17	NA	141812199	141758303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141759406_141764715_141765245_141811795
ES.24952.8	chr4	-	3973	2	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	44026	4	44026	-4	3prime_fragment	FALSE	canonical	3	181	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACCTGACCTCATTCA	NA	False	NA	-10	True	AATAAA	-14	NA	141767589	141758306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_141759406_141764715
ES.24953.1	chr4	+	202	1	Intergenic	novelGene_20577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTGT	1939	False	NA	NA	False	NA	NA	NA	141821032	141821234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141821000_141821200
ES.24954.1	chr4	+	180	1	Intergenic	novelGene_20578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	141855444	141855624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_141855400_141855600
ES.24955.10	chr4	-	3958	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	99.3915866660755	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTATGTGATTTGA	NA	False	NA	-3	True	AATAAA	-19	NA	141966720	141866550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874116_141874224_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.11	chr4	-	5376	7	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-36	0	intron_retention	FALSE	canonical	3	169	junction_2	30.5104717906638	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTATGTGATTTGA	NA	False	NA	-3	True	AATAAA	-19	NA	141966748	141866550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.13	chr4	-	3588	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.3864624791807	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTCTATGTGATTTG	NA	False	NA	-4	True	AATAAA	-18	NA	141966740	141866551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141868218_141868499_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.14	chr4	-	3816	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	87	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.5582358132823	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTCTATGTGATTTG	NA	False	NA	-4	True	AATAAA	-18	NA	141966625	141866551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141892210_141892272_141937325_141937518_141966295
ES.24955.15	chr4	-	3951	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.470439045074	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTCTATGTGATTTG	NA	False	NA	-4	True	AATAAA	-18	NA	141966658	141866551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141873571_141873735_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.16	chr4	-	3624	10	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.692742982801	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTCTATGTGATTTG	NA	False	NA	-4	True	AATAAA	-18	NA	141966720	141866551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141868218_141868499_141869108_141870604_141870656_141874333_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141892210_141892272_141937325_141937518_141966295
ES.24955.17	chr4	-	3923	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	96.9290977983392	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAATTCTATGTGATTT	NA	False	NA	-5	True	AATAAA	-17	NA	141966722	141866552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141920042_141920115_141937325_141937518_141966295
ES.24955.18	chr4	-	3683	8	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	83.1246911916928	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAATTCTATGTGATT	NA	False	NA	-6	True	AATAAA	-16	NA	141966673	141866553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874328_141874465_141878282_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.2	chr4	-	4992	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	104.248232011632	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966788	141829700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.20	chr4	-	4574	2	FSM	ENSMUSG00000040606.15	ENSMUST00000148812.2	5725	2	1152	-1	1152	0	multi-exon	FALSE	canonical	3	222	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAATTCTATGTGATT	2692	False	NA	-6	True	AATAAA	-16	NA	141872624	141866553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604
ES.24955.21	chr4	-	4555	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.606648246992	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGGAATTCTATGTGA	NA	False	NA	-8	True	AATAAA	-14	NA	141966674	141866555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141873468_141874224_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.22	chr4	-	3699	8	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.5472818901615	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGGAATTCTATGTGA	NA	False	NA	-8	True	AATAAA	-14	NA	141966717	141866555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881884_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.23	chr4	-	3820	8	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.791285894398	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGATGGAATTCTAT	NA	False	NA	-12	True	AATAAA	-10	NA	141966704	141866559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870650_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.24	chr4	-	3888	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.606648246992	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGATGGAATTCTAT	NA	False	NA	-12	True	AATAAA	-10	NA	141966685	141866559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874142_141874224_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.25	chr4	-	11492	1	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	3846	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGATGGAATTCTAT	NA	False	NA	-12	True	AATAAA	-10	NA	141878051	141866559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141866600_141878100
ES.24955.28	chr4	-	2641	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	-24	339	combination_of_known_junctions	FALSE	canonical	3	79	junction_3	56.4110280143223	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGATCGTGACTTAAGT	NA	False	NA	NA	False	NA	NA	NA	141966736	141867779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.29	chr4	-	2327	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-5	1521	-5	47	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTATTACATAAATATT	NA	False	NA	17	True	NA	NA	NA	141966717	141868071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.3	chr4	-	4676	14	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	96.4839870823838	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966664	141829700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141966295
ES.24955.31	chr4	-	2285	9	NNC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	37	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	108.273958087806	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAGAGAAAGAAA	NA	False	NA	-51	True	TTTAAA	-27	NA	141966675	141868139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886350_141886492_141892210_141892272_141937325_141937518_141966295
ES.24955.34	chr4	-	1913	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-11	1941	-11	360	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACAAAAGTAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	141966723	141868491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.37	chr4	-	1718	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	28	2097	28	204	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCGTTTGTTTTTGTTTT	NA	False	NA	-8	True	NA	NA	NA	141966684	141868647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.4	chr4	-	5604	16	NNC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	103.952040223685	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	141966752	141829700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141873578_141874224_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.41	chr4	-	184	1	Intergenic	novelGene_20579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGAGCTTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	141893267	141893083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141893100_141893300
ES.24955.5	chr4	-	3352	15	NIC	ENSMUSG00000040606.15	novel	4898	15	NA	NA	-21	-1585	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	104.248232011632	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGCCTTTCTAGCCGC	NA	False	NA	NA	False	AAAACA	-20	NA	141966733	141831285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.6	chr4	-	5161	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	24	-1342	24	1342	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGGGCCACACTAACCC	NA	False	NA	NA	False	NA	NA	NA	141966688	141865208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24955.7	chr4	-	3891	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	-40	-8	-40	8	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATTTGATTGTTTCT	NA	False	NA	5	True	AATAAA	-27	NA	141966752	141866542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ES.24956.1	chr4	-	175	1	Intergenic	novelGene_20580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	141989701	141989526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_141989500_141989700
ES.24957.1	chr4	+	175	1	Intergenic	novelGene_20581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGACATAGGTT	NA	False	NA	NA	False	NA	NA	NA	142003851	142004026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142003900_142004000
ES.24958.1	chr4	+	2823	3	Antisense	novelGene_ENSMUSG00000085816.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATACAAACAATCA	NA	False	NA	NA	False	AGTAAA	-19	NA	142071664	142075920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_142071708_142071812_142071992_142073319
ES.24959.1	chr4	-	195	1	Intergenic	novelGene_20582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATCATAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	142097233	142097038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142097000_142097200
ES.2496.1	chr10	-	597	3	Antisense	novelGene_ENSMUSG00000019978.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTATCATGTTT	NA	False	NA	NA	False	AATACA	-24	NA	25259596	25250972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_25251250_25258875_25258958_25259358
ES.2496.2	chr10	-	4103	1	Intergenic	novelGene_1892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGCTGCTCTTCCAGAG	NA	False	NA	NA	False	AATAAA	-14	NA	25257317	25253214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25253200_25257300
ES.2496.3	chr10	-	1230	1	Intergenic	novelGene_1893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCCCCCCCCCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25259584	25258354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25258400_25259600
ES.24960.1	chr4	-	162	1	Intergenic	novelGene_20583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATGAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	142109599	142109437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142109400_142109600
ES.24961.1	chr4	-	155	1	Intergenic	novelGene_20584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAAAAGAATGTTC	NA	False	NA	NA	False	NA	NA	NA	142383131	142382976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142383000_142383100
ES.24962.1	chr4	+	127	1	Intergenic	novelGene_20585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTTTTTTTATAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	142821712	142821839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142821700_142821800
ES.24963.1	chr4	+	97	1	Intergenic	novelGene_20588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142899642	142899739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142899600_142899700
ES.24964.1	chr4	+	3287	1	Intergenic	novelGene_20589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATGTAAATGTGCCAT	NA	False	NA	NA	False	AAGAAA	-29	NA	142902159	142905446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142902200_142905400
ES.24965.1	chr4	+	159	1	Intergenic	novelGene_20591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	142934007	142934166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142934000_142934200
ES.24966.1	chr4	-	3626	9	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.238457439055	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGCACGCTCATTCT	NA	False	NA	6	True	AATAAA	-25	NA	142939278	142833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142834228_142860092_142862665_142868689_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.10	chr4	-	5723	11	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-12	-1654	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	11.6365802536656	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCGTGCTTCTTGAGC	NA	False	NA	-4	True	TTTAAA	-15	NA	142939291	142835614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.11	chr4	-	5605	10	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	1	-1655	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	14.3819159423506	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTCGTGCTTCTTGAG	NA	False	NA	-5	True	TTTAAA	-14	NA	142939278	142835615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142907446_142907562_142921230_142921305_142939184
ES.24966.12	chr4	-	2587	1	Intergenic	novelGene_20586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCACTTCTGTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	142852185	142849598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142849600_142852200
ES.24966.13	chr4	-	6684	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-3	-20072	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGCATTTTGTCCATAA	NA	False	NA	3	True	AATAAA	-23	NA	142939282	142854032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.14	chr4	-	6633	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20075	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	15.352117117844	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTGCATTTTGTCCA	NA	False	NA	0	True	AATAAA	-20	NA	142939281	142854035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142907446_142907562_142921230_142921305_142939184
ES.24966.15	chr4	-	9415	8	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-6	20075	-2	-20075	5prime_fragment	FALSE	canonical	3	22	junction_5	9.80420567815628	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTGCATTTTGTCCA	NA	False	NA	0	True	AATAAA	-20	NA	142939281	142854035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.16	chr4	-	6600	8	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	-2	-20077	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	15.9616888268153	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGGACTGCATTTTGTC	NA	False	NA	-2	True	AATAAA	-18	NA	142939277	142854037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.17	chr4	-	4223	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5874717256661	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGACTGCATTTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	142939277	142854038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142860196_142868726_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.18	chr4	-	6663	9	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	-5	-20078	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	15.4469859519584	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGACTGCATTTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	142939284	142854038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.2	chr4	-	6901	6	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	42541	-5	24571	5	3prime_fragment	FALSE	canonical	3	14	junction_1	15.509996776273	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGCACGCTCATTCT	NA	False	NA	6	True	AATAAA	-25	NA	142896734	142833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625_142888753_142896605
ES.24966.20	chr4	-	7469	9	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	37	-20080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3297097167559	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAAGGACTGCATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	142939238	142854040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142859692_142861589_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.21	chr4	-	6741	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-11	-20080	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.2447518622887	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAAGGACTGCATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	142939290	142854040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.23	chr4	-	6454	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-3	-20302	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTTCATTGTTTTTA	NA	False	NA	3	True	ATTAAA	-23	NA	142939282	142854262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.24	chr4	-	9195	8	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-13	20302	-9	-20302	5prime_fragment	FALSE	canonical	3	22	junction_5	9.80420567815628	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTTCATTGTTTTTA	NA	False	NA	3	True	ATTAAA	-23	NA	142939288	142854262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.25	chr4	-	6329	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.8980071581387	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTTCATTGTTTTTA	NA	False	NA	3	True	ATTAAA	-23	NA	142939281	142854262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142860136_142860259_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.26	chr4	-	9242	9	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	1	-20302	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	11.1439445440113	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTTCATTGTTTTTA	NA	False	NA	3	True	ATTAAA	-23	NA	142939278	142854262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.27	chr4	-	5902	4	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	32574	-20305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9768406778059	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGATTGTTCATTGTTT	NA	False	NA	0	True	ATTAAA	-20	NA	142888731	142854265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855561_142858279_142862670_142868693_142868805_142888625
ES.24966.28	chr4	-	1418	2	Intergenic	novelGene_20587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGATTGTTCATTGTT	NA	False	NA	-1	True	ATTAAA	-19	NA	142857465	142854266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142855545_142857325
ES.24966.29	chr4	-	6358	8	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	11	-20306	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	15.9616888268153	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGATTGTTCATTGTT	NA	False	NA	-1	True	ATTAAA	-19	NA	142939264	142854266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.3	chr4	-	3533	9	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.3297097167559	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGTGTGCGCACGCTC	NA	False	NA	1	True	AATAAA	-20	NA	142939259	142833960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142834220_142860154_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.30	chr4	-	6428	9	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	-2	-20306	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	15.4469859519584	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGATTGTTCATTGTT	NA	False	NA	-1	True	ATTAAA	-19	NA	142939277	142854266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.31	chr4	-	5870	4	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-2	-20308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.4568161143456	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGGGATTGTTCATTG	NA	False	NA	-3	True	ATTAAA	-17	NA	142939277	142854268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142939184
ES.24966.32	chr4	-	6197	4	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	32656	-20308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.4568161143456	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGGGATTGTTCATTG	NA	False	NA	-3	True	ATTAAA	-17	NA	142888649	142854268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888229
ES.24966.33	chr4	-	7687	1	NIC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	59180	-20478	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGCTTCAATTGTATT	NA	False	NA	5	True	AATAAA	-25	NA	142862125	142854438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_142854400_142862100
ES.24966.34	chr4	-	6169	8	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-2	-20478	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	15.6008895612411	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGCTTCAATTGTATT	NA	False	NA	5	True	AATAAA	-25	NA	142939277	142854438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142907446_142907562_142921230_142921305_142939184
ES.24966.35	chr4	-	6199	8	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	-9	-20489	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	15.9616888268153	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAATTGTTTTGGGTGCT	NA	False	NA	-6	True	AATAAA	-14	NA	142939288	142854449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.37	chr4	-	6268	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-4	-20489	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAATTGTTTTGGGTGCT	NA	False	NA	-6	True	AATAAA	-14	NA	142939283	142854449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.38	chr4	-	6300	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	-1	-20511	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.2447518622887	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATATTTAAAAT	NA	False	NA	-28	True	TATAAA	-17	NA	142939280	142854471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.4	chr4	-	7363	11	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	11.6365802536656	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCCGAGTGTGCGCAC	NA	False	NA	-3	True	AATAAA	-16	NA	142939281	142833964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.40	chr4	-	5924	5	NNC	ENSMUSG00000057637.14	novel	574	5	NA	NA	32617	-20511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.5836277955704	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATATTTAAAAT	NA	False	NA	-28	True	TATAAA	-17	NA	142888688	142854471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142855545_142858279_142862415_142862519_142862670_142868693_142868805_142888233
ES.24966.41	chr4	-	5272	7	NIC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-9	-24151	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	16.7473049241429	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTACCATTTCTTTAATT	NA	False	NA	3	True	AATAAA	-31	NA	142939288	142858111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.42	chr4	-	5338	8	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-10	24156	-6	-24156	5prime_fragment	FALSE	canonical	3	22	junction_5	9.80420567815628	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGGTACCATTTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	142939285	142858116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.43	chr4	-	5046	3	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	32684	-24162	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	24.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCACAAAGTGGTACCA	NA	False	NA	-8	True	AATAAA	-20	NA	142888621	142858122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142862670_142868693_142868805_142888233
ES.24966.44	chr4	-	5271	8	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	34	-24162	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	15.3808786670797	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCACAAAGTGGTACCA	NA	False	NA	-8	True	AATAAA	-20	NA	142939241	142858122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939184
ES.24966.45	chr4	-	5226	7	NIC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-9	-24167	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	16.4215305823381	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGTGCTCACAAAGTGG	NA	False	NA	-13	True	AATAAA	-15	NA	142939288	142858127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142907446_142907562_142921230_142921305_142939184
ES.24966.46	chr4	-	5258	7	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	0	-24167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.6468827043885	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGTGCTCACAAAGTGG	NA	False	NA	-13	True	AATAAA	-15	NA	142939565	142858127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142862670_142868693_142868800_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939454
ES.24966.47	chr4	-	3799	9	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-2	-24167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.580904176062	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGTGCTCACAAAGTGG	NA	False	NA	-13	True	AATAAA	-15	NA	142939281	142858127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142858796_142860292_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905884_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.48	chr4	-	2400	1	Intergenic	novelGene_20590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	142928208	142925808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142925800_142928200
ES.24966.5	chr4	-	5152	5	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	32608	-1067	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	8.4372685153431	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGGATTTGAACGGGT	NA	False	NA	NA	False	AATAAA	-44	NA	142888697	142835027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142860072_142860453_142862670_142888625
ES.24966.6	chr4	-	5666	5	ISM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	50544	1080	32574	-1080	3prime_fragment	FALSE	canonical	3	14	junction_1	17.2699160391705	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAACCAGGAG	NA	False	NA	NA	False	AATAAA	-31	NA	142888731	142835040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625
ES.24966.7	chr4	-	3418	7	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	-3	-1125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.0817668065862	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	142939282	142835085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142860320_142905884_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.8	chr4	-	5659	10	FSM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	-5	1650	-1	-1650	multi-exon	FALSE	canonical	3	14	junction_1	12.2393818935354	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGCTTCTTGAGCTGTG	NA	False	NA	0	True	TTTAAA	-19	NA	142939280	142835610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ES.24966.9	chr4	-	5093	5	NNC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	32626	-1654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.8793234291311	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCGTGCTTCTTGAGC	NA	False	NA	-4	True	TTTAAA	-15	NA	142888679	142835614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888572
ES.24967.1	chr4	+	172	1	Intergenic	novelGene_20592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	142943128	142943300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142943100_142943300
ES.24967.2	chr4	+	279	1	Intergenic	novelGene_20593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTCTCATAACCTCA	NA	False	NA	NA	False	NA	NA	NA	142943130	142943409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142943100_142943400
ES.24968.1	chr4	+	595	1	Intergenic	novelGene_20595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	142993135	142993730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_142993100_142993700
ES.24969.1	chr4	+	1095	3	Antisense	novelGene_ENSMUSG00000028583.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGGGGCACCAGCATC	NA	False	NA	NA	False	NA	NA	NA	143013079	143016364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_143013138_143013642_143013773_143015457
ES.2497.1	chr10	-	1590	1	Intergenic	novelGene_1894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCACAGCACATCGTT	NA	False	NA	NA	False	NA	NA	NA	25282032	25280442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25280400_25282000
ES.24970.1	chr4	+	177	1	Intergenic	novelGene_20599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	143019451	143019628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143019500_143019600
ES.24971.1	chr4	-	2809	7	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	-7	32074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.253797300659	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGAAAAACTTAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	143026040	142961926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142962095_142993082_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ES.24971.10	chr4	-	1725	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	-18	110	-18	-110	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGGACTCAGTGTTGC	NA	False	NA	-133	True	AATAGA	-21	NA	143026152	142994110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ES.24971.11	chr4	-	3722	2	ISM	ENSMUSG00000028583.15	ENSMUST00000119654.2	762	5	20033	5349	20033	-5349	internal_fragment	FALSE	canonical	3	609	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGATAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	143006000	143000264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_143000627_143002640
ES.24971.12	chr4	-	4230	1	Intergenic	novelGene_20596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	143011763	143007533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143007500_143011800
ES.24971.13	chr4	-	1722	1	Intergenic	novelGene_20597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGCTAGAATTTCCT	NA	False	NA	NA	False	NA	NA	NA	143011900	143010178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143010200_143011900
ES.24971.14	chr4	-	1026	1	Intergenic	novelGene_20598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143013302	143012276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143012300_143013300
ES.24971.2	chr4	-	159	1	Intergenic	novelGene_20594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	142974472	142974313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_142974300_142974500
ES.24971.3	chr4	-	4764	8	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	36	3971	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	239.106329348877	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGGGGTCTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	143026098	142990029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142992327_142992497_142992869_142993685_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ES.24971.4	chr4	-	1895	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	-58	-20	-58	20	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGACTTTAGATGTCA	NA	False	NA	-3	True	AATAAA	-40	NA	143026192	142993980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ES.24971.5	chr4	-	1713	6	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	207.997499984976	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGGCCAACATTTGACA	NA	False	NA	-25	True	AATAAA	-18	NA	143026041	142994002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002769_143025758
ES.24971.6	chr4	-	5058	5	NIC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	463	junction_2	63.5255853967518	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGGCCAACATTTGAC	NA	False	NA	-26	True	AATAAA	-17	NA	143026040	142994003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_142994997_142995757_142995870_142997092_143000627_143002640_143002778_143025758
ES.24971.7	chr4	-	2072	6	NNC	ENSMUSG00000028583.15	novel	1817	6	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	218.823581910177	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGGCCAACATTTG	NA	False	NA	-28	True	AATAAA	-15	NA	143026040	142994005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_142994997_142995757_142996224_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ES.24971.8	chr4	-	6321	4	NIC	ENSMUSG00000028583.15	novel	762	5	NA	NA	-49	-5	intron_retention	FALSE	canonical	3	464	junction_1	60.5988632089928	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGGCCAACATTTG	NA	False	NA	-28	True	AATAAA	-15	NA	143026082	142994005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_142994997_142995757_143000627_143002640_143002778_143025758
ES.24971.9	chr4	-	1679	5	FSM	ENSMUSG00000028583.15	ENSMUST00000119654.2	762	5	-7	-910	-7	-5	multi-exon	FALSE	canonical	1	7	junction_2	239.080530365816	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGGCCAACATTTG	NA	False	NA	-28	True	AATAAA	-15	NA	143026040	142994005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_142994997_142995757_142995870_143000469_143000627_143002640_143002778_143025758
ES.24972.1	chr4	+	3251	1	Intergenic	novelGene_20600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143026468	143029719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143026500_143029700
ES.24973.1	chr4	+	175	1	Intergenic	novelGene_20601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATCTCTTCTCATC	NA	False	NA	NA	False	NA	NA	NA	143055169	143055344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143055200_143055300
ES.24974.1	chr4	+	144	1	Intergenic	novelGene_20602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAAATCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	143069891	143070035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143069900_143070000
ES.24975.1	chr4	+	2469	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	-149	4	-149	-4	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGCCTGTAGTCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	143076177	143097598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143077382_143096333
ES.24976.1	chr4	-	3267	1	Antisense	novelGene_ENSMUSG00000028584.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAAGAGACTCTAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	143077235	143073968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_143074000_143077200
ES.24977.1	chr4	-	185	1	Intergenic	novelGene_20603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTTTTTAAAG	2568	False	NA	NA	False	NA	NA	NA	143134074	143133889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143133900_143134100
ES.24978.1	chr4	+	3825	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-557	-8	4	8	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTTTGTATATGTG	NA	False	NA	18	True	AATAAA	-25	NA	143138999	143147669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ES.24978.10	chr4	+	3356	5	NNC	ENSMUSG00000046862.15	novel	3886	5	NA	NA	7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.7208720542134	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTTTCACTTCCTT	NA	False	NA	8	True	AATAAA	-15	NA	143139548	143147659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_143139662_143141893_143141984_143143209_143143523_143143942_143144531_143145407
ES.24978.11	chr4	+	3519	5	NNC	ENSMUSG00000046862.15	novel	3886	5	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.3338842125551	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTTTCACTTCCTT	NA	False	NA	8	True	AATAAA	-15	NA	143139563	143147659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_143139662_143141918_143142167_143143189_143143523_143143942_143144531_143145407
ES.24978.12	chr4	+	4116	3	ISM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	21	0	-1	0	intron_retention	FALSE	canonical	3	80	junction_1	47	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139577	143147661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_143139662_143143209_143143523_143143942
ES.24978.13	chr4	+	2521	3	NNC	ENSMUSG00000046862.15	novel	3260	4	NA	NA	4637	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	74	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGTTTCACTTCCT	NA	False	NA	7	True	AATAAA	-14	NA	143144216	143147658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_143144531_143145407_143146369_143146412
ES.24978.2	chr4	+	3590	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	296	0	-250	0	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139291	143147661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ES.24978.3	chr4	+	3543	4	NIC	ENSMUSG00000046862.15	novel	3260	4	NA	NA	-248	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	75.7011668778406	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139293	143147661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_143139662_143143189_143143523_143143942_143144531_143145407
ES.24978.5	chr4	+	2282	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-242	1220	-227	-1220	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATGAATGACTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	143139314	143146441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ES.24978.6	chr4	+	2197	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	473	1216	-73	-1216	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGACTTTCTCCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	143139468	143146445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ES.24978.7	chr4	+	4802	6	NNC	ENSMUSG00000046862.15	novel	3886	5	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0260227590138	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGTTTCACTTCCT	NA	False	NA	7	True	AATAAA	-14	NA	143139520	143147658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_143139662_143140338_143141783_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ES.24978.8	chr4	+	4370	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	-33	-1077	-18	1077	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTAGTGGCTAGGTTTT	NA	False	NA	NA	False	TATAAA	-23	NA	143139523	143148738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ES.24979.1	chr4	-	495	1	Antisense	novelGene_ENSMUSG00000046862.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143140833	143140338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_143140300_143140800
ES.2498.1	chr10	-	1836	1	Intergenic	novelGene_1895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAATTTGTATTCATA	NA	False	NA	NA	False	NA	NA	NA	25303621	25301785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25301800_25303600
ES.24980.1	chr4	+	177	1	Intergenic	novelGene_20604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	143193039	143193216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143193000_143193200
ES.24981.1	chr4	+	2371	3	Fusion	ENSMUSG00000096154.3_ENSMUSG00000095409.2_ENSMUSG00000070618.11	novel	2056	3	NA	NA	-38	-20	intron_retention	TRUE	canonical	1	2	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAATAATACCA	NA	False	NA	NA	False	NA	NA	NA	143237874	143300348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_143237929_143281992_143282307_143298345
ES.24981.2	chr4	+	2110	4	Fusion	ENSMUSG00000096154.3_ENSMUSG00000095409.2_ENSMUSG00000070618.11	novel	2056	3	NA	NA	-36	1	multi-exon	FALSE	canonical	1	2	junction_1	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTGTTATTTTTCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	143237876	143300369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_143237929_143281992_143282307_143298345_143298937_143299216
ES.24982.1	chr4	+	176	1	Intergenic	novelGene_20605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACTTTATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	143380140	143380316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143380100_143380300
ES.24983.1	chr4	+	2429	1	Intergenic	novelGene_20606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTCTCAGTGTCTTC	9221	False	NA	NA	False	NA	NA	NA	143403634	143406063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143403600_143406100
ES.24984.1	chr4	-	2173	4	NNC	ENSMUSG00000078511.4	novel	1684	3	NA	NA	-8742	401	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCTTGTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	143686328	143674748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_143675908_143676185_143676777_143677251_143677566_143686219
ES.24984.2	chr4	-	6280	1	Intergenic	novelGene_20607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGTTCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	143686326	143680046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143680000_143686300
ES.24985.1	chr4	+	173	2	Intergenic	novelGene_20608	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGG	NA	False	NA	NA	False	NA	NA	NA	143702042	143707162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143702100_143707046
ES.24986.1	chr4	-	3876	3	Intergenic	novelGene_20609	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	143714725	143710575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710710_143712480_143712695
ES.24986.10	chr4	-	1804	3	Intergenic	novelGene_20615	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	4	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	143715105	143710579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710710_143712141_143714804
ES.24986.2	chr4	-	4517	3	Intergenic	novelGene_20612	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143715180	143710577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710695_143715106_143715148
ES.24986.3	chr4	-	4481	2	Intergenic	novelGene_20610	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143715103	143710577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710645_143710689
ES.24986.4	chr4	-	4598	1	Intergenic	novelGene_20611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143715175	143710577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710600_143715200
ES.24986.5	chr4	-	4510	3	Intergenic	novelGene_20613	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143715207	143710577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710712_143715081_143715140
ES.24986.7	chr4	-	4341	3	Intergenic	novelGene_20614	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	143715103	143710578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710710_143711837_143711962
ES.24986.8	chr4	-	1822	3	Intergenic	novelGene_20616	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	143715106	143710579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710712_143712141_143714785
ES.24986.9	chr4	-	4474	3	Intergenic	novelGene_20617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	143715173	143710579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143710653_143710712_143715106_143715165
ES.24987.1	chr4	-	2462	4	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3303	787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.9602610609146	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTATTTTTTTTCCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	143724242	143716901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_143718582_143719503_143719863_143720652_143720966_143724132
ES.24987.2	chr4	-	3590	3	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3299	783	intron_retention	FALSE	canonical	3	18	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTATTTTTTTTC	NA	False	NA	-11	True	AATAAA	-13	NA	143724238	143716905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_143720077_143720652_143720966_143724132
ES.24987.3	chr4	-	2639	4	NNC	ENSMUSG00000078509.2	novel	1753	3	NA	NA	-3273	780	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	11.4406682011537	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTTGAGTATTTTTT	NA	False	NA	-14	True	AATAAA	-10	NA	143724212	143716908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_143718582_143719503_143720077_143720652_143720966_143724132
ES.24988.1	chr4	+	159	1	Intergenic	novelGene_20618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTGGGTAAATCTTTA	8979	False	NA	NA	False	NA	NA	NA	143728429	143728588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143728400_143728600
ES.24989.1	chr4	+	2158	2	Intergenic	novelGene_20619	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAATAGCAA	NA	False	NA	NA	False	NA	NA	NA	143743990	143754938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143745277_143754066
ES.2499.1	chr10	-	673	1	Intergenic	novelGene_1896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCTATATCCTGATT	NA	False	NA	NA	False	NA	NA	NA	25315341	25314668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25314700_25315300
ES.24990.1	chr4	-	176	1	Intergenic	novelGene_20620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	143882161	143881985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143882000_143882200
ES.24991.1	chr4	-	207	1	Intergenic	novelGene_20621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGATTTGTTTCCACAT	NA	False	NA	NA	False	NA	NA	NA	143954844	143954637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143954600_143954800
ES.24992.1	chr4	+	187	1	Intergenic	novelGene_20622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	143975149	143975336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_143975100_143975300
ES.24993.1	chr4	-	159	1	Intergenic	novelGene_20623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	143985731	143985572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_143985600_143985700
ES.24994.1	chr4	-	2196	5	NNC	ENSMUSG00000080943.2	novel	1166	2	NA	NA	-7638	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTTCTTGAGATGATC	NA	False	NA	NA	False	NA	NA	NA	144039149	144030080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144031481_144031773_144031964_144034313_144034501_144037343_144037703_144039089
ES.24995.1	chr4	+	178	1	Intergenic	novelGene_20624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTATAAGTTTTGGC	NA	False	NA	NA	False	NA	NA	NA	144042177	144042355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_144042200_144042400
ES.24996.1	chr4	-	178	1	Intergenic	novelGene_20625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144049181	144049003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_144049000_144049200
ES.24997.1	chr4	+	2679	4	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3308	791	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	5.90668171555645	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATTTTTTTTCCTTTGTT	NA	False	NA	NA	False	AATGAA	-20	NA	144053510	144060826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150
ES.24997.2	chr4	+	2308	5	NNC	ENSMUSG00000078508.2	novel	1745	3	NA	NA	-3254	780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.7221976835301	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTTTTGAGTATTTTT	NA	False	NA	NA	False	AATGAA	-9	NA	144053564	144060815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_144053628_144056792_144057106_144057681_144058255_144059150_144060264_144060569
ES.24998.1	chr4	+	1573	2	ISM	ENSMUSG00000070619.6	ENSMUST00000094526.5	2094	4	4653	-26	4653	26	3prime_fragment	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCATTATTATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	144089164	144091015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_144089562_144089839
ES.24999.1	chr4	-	1635	4	NNC	ENSMUSG00000073721.6	novel	1434	3	NA	NA	-4211	194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTCTCCCTTTTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	144108714	144099135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144099901_144103261_144103832_144104367_144104531_144108577
ES.24999.2	chr4	-	1255	3	NNC	ENSMUSG00000073721.6	novel	1434	3	NA	NA	-4211	-3547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	144108714	144102876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144103832_144104367_144104531_144108577
ES.25.1	chr1	-	1260	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTACAAGGGTCAACT	NA	False	NA	NA	False	NA	NA	NA	5210839	5209579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_5209600_5210800
ES.250.1	chr1	-	178	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34943292	34943114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_34943100_34943300
ES.2500.1	chr10	-	539	2	Antisense	novelGene_ENSMUSG00000019978.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAGTAAACTTATGAT	NA	False	NA	NA	False	NA	NA	NA	25378018	25371247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_25371488_25377719
ES.25000.1	chr4	+	187	1	Intergenic	novelGene_20627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGTGTGTGTCTGGTC	NA	False	NA	3	True	NA	NA	NA	144130317	144130504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_144130300_144130500
ES.25001.1	chr4	+	498	2	NNC	ENSMUSG00000028590.7	novel	767	2	NA	NA	-791	-15	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAAGCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	144130646	144132856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_144130877_144132588
ES.25001.2	chr4	+	993	2	NNC	ENSMUSG00000028590.7	novel	767	2	NA	NA	-749	522	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCACTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	144130688	144133393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_144130877_144132588
ES.25001.3	chr4	+	2435	1	Antisense	novelGene_ENSMUSG00000028591.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAATCACAGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	144132976	144135411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_144133000_144135400
ES.25002.1	chr4	-	2453	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	7	0	7	0	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	144135027	144118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
ES.25002.2	chr4	-	2532	5	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	43.6369969177532	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144134994	144118244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907_144130021_144134926
ES.25002.4	chr4	-	2387	4	NNC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	11949	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.2673390921357	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144123038	144118244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144119688_144121144_144121730_144122249_144122573_144123002
ES.25002.5	chr4	-	2985	5	NNC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	3792	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.3396901180412	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTGTTGGTTTTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	144131195	144118244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144119688_144121144_144121730_144122249_144122573_144129907_144130072_144130725
ES.25002.6	chr4	-	3907	3	NIC	ENSMUSG00000028591.12	novel	2460	4	NA	NA	7	-3	intron_retention	FALSE	canonical	3	80	junction_2	5.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTTGTTGGTTTTG	NA	False	NA	-7	True	AATAAA	-12	NA	144135027	144118246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144121730_144122249_144122573_144134926
ES.25002.7	chr4	-	171	1	Intergenic	novelGene_20626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	144129121	144128950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_144129000_144129100
ES.25003.1	chr4	+	1696	1	FSM	ENSMUSG00000070610.5	ENSMUST00000118978.2	1389	1	33	-340	33	340	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAACAGGCCAATTGG	NA	False	NA	NA	False	AATAAA	-44	NA	144313846	144315542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_144313800_144315500
ES.25004.1	chr4	-	1729	6	NNC	ENSMUSG00000041735.9	novel	1227	4	NA	NA	-170965	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.4	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTCTTTTATGATGA	NA	False	NA	NA	False	AATAAA	-16	NA	144618939	144429716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144430536_144441861_144442082_144472607_144472753_144597611_144597778_144614106_144614201_144618654
ES.25005.1	chr4	+	2341	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	-566	562	-316	2	multi-exon	FALSE	canonical	3	137	junction_1	25.4982352330509	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTCACGTGTTTGGGA	5380	False	NA	14	True	AATAAA	-21	NA	144619080	144654217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ES.25005.2	chr4	+	1418	7	NNC	ENSMUSG00000066026.15	novel	1349	7	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	82.3279350456993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCCTTCGTTCACGT	5629	False	NA	6	True	AATAAA	-13	NA	144619329	144654209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_144619481_144620154_144620280_144645220_144645365_144645954_144646075_144646410_144646658_144650475_144650602_144653704
ES.25005.3	chr4	+	1541	7	NIC	ENSMUSG00000066026.15	novel	1349	7	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	82.6997581616778	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCGTTCACGTGTTTG	5658	False	NA	11	True	AATAAA	-18	NA	144619358	144654214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_144619481_144620154_144620280_144645220_144645365_144645799_144646075_144646410_144646650_144650475_144650602_144653704
ES.25005.4	chr4	+	1471	5	NIC	ENSMUSG00000066026.15	novel	1349	7	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_3	77.8540300819425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGTTCACGTGTTTGG	6009	False	NA	12	True	AATAAA	-19	NA	144619709	144654215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_144620280_144645220_144645365_144645954_144646075_144650475_144650602_144653704
ES.25005.5	chr4	+	876	3	NIC	ENSMUSG00000066026.15	novel	1780	6	NA	NA	385	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTCGTTCACGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	144645833	144654213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_144646075_144650475_144650602_144653704
ES.25006.1	chr4	-	209	1	Antisense	novelGene_ENSMUSG00000066026.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAAACTCTGCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	144620063	144619854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_144619900_144620100
ES.25007.1	chr4	+	172	1	Intergenic	novelGene_20628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144734711	144734883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_144734700_144734900
ES.25008.1	chr4	+	4571	3	Antisense	novelGene_ENSMUSG00000020220.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGACTGCCATGCAAT	NA	False	NA	NA	False	NA	NA	NA	144831709	144839951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_144833648_144835081_144835163_144837399
ES.25009.1	chr4	-	14790	62	NIC	ENSMUSG00000020220.17	novel	15665	68	NA	NA	-16617	1	combination_of_known_splicesites	TRUE	canonical	1	4	junction_30	10.6710860458788	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTGGTTTCTTTCTC	5300	False	NA	-3	True	AATAAA	-19	NA	144898673	144699194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826638_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647
ES.25009.11	chr4	-	13451	69	NNC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	-4	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	10.6982337739625	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGCTGTTGTGAAGG	NA	False	NA	-2	True	AATACA	-17	NA	144921579	144701361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853036_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065_144917237_144921488
ES.25009.13	chr4	-	13557	69	NNC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	12	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	10.7886566567274	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGTGCTGTTGTGAAG	NA	False	NA	-3	True	AATACA	-16	NA	144921553	144701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813382_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832487_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065_144917237_144921488
ES.25009.14	chr4	-	6335	40	NNC	ENSMUSG00000020220.17	novel	10176	52	NA	NA	-30686	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	11.432044884014	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGTGCTGTTGTGAAG	NA	False	NA	-3	True	AATACA	-16	NA	144849206	144701362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144806536_144806654_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826638_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013
ES.25009.17	chr4	-	4990	32	NIC	ENSMUSG00000020220.17	novel	15665	68	NA	NA	-18934	131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.0184013837099	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGCTGTGCTGTTGTGA	NA	False	NA	-5	True	AATACA	-14	NA	144837454	144701364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144837401
ES.25009.18	chr4	-	3643	2	ISM	ENSMUSG00000020220.17	ENSMUST00000147511.2	802	4	4264	-130	4264	130	3prime_fragment	FALSE	canonical	3	45	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGGCTGTGCTGTTGTG	NA	False	NA	-6	True	AATACA	-13	NA	144706267	144701365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_144701839_144703097
ES.25009.20	chr4	-	5287	34	NNC	ENSMUSG00000020220.17	novel	15665	68	NA	NA	-18072	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	10.5639858076036	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCAGGGCTGTGCTGTTG	NA	False	NA	-8	True	AATACA	-11	NA	144836592	144701367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144836542
ES.25009.22	chr4	-	3061	21	NNC	ENSMUSG00000020220.17	novel	3811	6	NA	NA	5164	-533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.9538805909139	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAGGTCTGCTAAGGC	NA	False	NA	NA	False	ATTAAA	-30	NA	144813356	144707400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144707580_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273
ES.25009.23	chr4	-	3716	2	Genic_Genomic	ENSMUSG00000020220.17	novel	689	5	NA	NA	-1336	4565	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTGGTGTCGTTAAAG	7618	False	NA	NA	False	NA	NA	NA	144778940	144774986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_144775740_144775977
ES.25009.24	chr4	-	5012	1	NIC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	-4427	-4632	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCAGCTTGTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	144789195	144784183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144784200_144789200
ES.25009.25	chr4	-	3795	1	NIC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	7278	-10910	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	144811242	144807447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144807400_144811200
ES.25009.26	chr4	-	1859	12	ISM	ENSMUSG00000020220.17	ENSMUST00000036579.14	15849	70	-3	195216	-3	8522	5prime_fragment	FALSE	canonical	1	4	junction_1	2.40522846460417	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCAGAGGCCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	144921578	144894407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065_144917237_144921488
ES.25009.3	chr4	-	9218	44	NNC	ENSMUSG00000020220.17	novel	15665	68	NA	NA	20977	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_22	10.1649989618296	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACAGGTTTGGTTTCTTT	NA	False	NA	-6	True	AATAAA	-16	NA	144861079	144699197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813382_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007
ES.25009.4	chr4	-	3171	5	ISM	ENSMUSG00000020220.17	ENSMUST00000185113.2	10176	52	135245	-1824	30793	-146	3prime_fragment	FALSE	canonical	3	34	junction_2	4.63680924774785	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAGATATAAAA	NA	False	NA	NA	False	NA	NA	NA	144746811	144699341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706
ES.25009.5	chr4	-	13628	69	NIC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	-25	136	combination_of_known_splicesites	FALSE	canonical	1	4	junction_30	10.5921867626673	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGTTGTGAAGGTT	NA	False	NA	0	True	AATACA	-19	NA	144921600	144701359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826638_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065_144917237_144921488
ES.25009.9	chr4	-	12892	64	NIC	ENSMUSG00000020220.17	novel	15849	70	NA	NA	17564	134	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	10.9544511501033	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTGCTGTTGTGAAGG	4301	False	NA	-2	True	AATACA	-17	NA	144899672	144701361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826638_144830183_144830259_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623
ES.2501.1	chr10	-	180	1	Intergenic	novelGene_1897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCAGACAAA	NA	False	NA	NA	False	NA	NA	NA	25406880	25406700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25406700_25406900
ES.25010.1	chr4	-	1182	1	Intergenic	novelGene_20629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	144934232	144933050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_144933000_144934200
ES.25011.1	chr4	-	4958	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	-42	-1098	-42	1098	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGGTAAACGTCTTC	9981	False	NA	NA	False	AATAAA	-39	NA	144973482	144938934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.10	chr4	-	3680	9	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	22.6215466977835	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTATTTTTGCTTATC	7833	False	NA	NA	False	AATAAA	-30	NA	144973439	144940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144955573_144955677_144973293
ES.25011.12	chr4	-	4903	8	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	2	-8	intron_retention	FALSE	canonical	3	41	junction_5	10.1840210974981	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTATTTTTGCTTATC	7834	False	NA	NA	False	AATAAA	-30	NA	144973438	144940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144951055_144951381_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.13	chr4	-	4334	10	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	25	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.5673204128732	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAATTGATTTTATCT	7857	False	NA	NA	False	AATAAA	-7	NA	144973415	144940063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955001_144955677_144973293
ES.25011.14	chr4	-	3302	12	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-3053	-788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	28.3371088069547	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTCTGGCCTCCTC	6970	False	NA	NA	False	NA	NA	NA	144976493	144940820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144975363_144975473_144976007_144976141_144976316
ES.25011.15	chr4	-	2924	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	99	795	99	-795	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTGCTCTGAGTCTGG	7931	False	NA	NA	False	NA	NA	NA	144973341	144940827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.16	chr4	-	2879	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	2	937	2	-937	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGAGCCCTGGCTGAGC	7834	False	NA	-7	True	TATAAA	-22	NA	144973438	144940969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.17	chr4	-	3125	13	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-18009	-938	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	30.9026248435666	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGAGCCCTGGCTGAG	6886	False	NA	-8	True	TATAAA	-21	NA	144991449	144940970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955644_144955677_144975363_144975473_144976007_144976141_144988062_144988174_144991339
ES.25011.18	chr4	-	2707	9	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	32	-976	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	22.7362595868362	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCCTGCTTATAAATG	7864	False	NA	-46	True	NA	NA	NA	144973408	144941008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144973293
ES.25011.19	chr4	-	137	1	Intergenic	novelGene_20630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	144968741	144968604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_144968600_144968700
ES.25011.2	chr4	-	3759	10	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	21.7414663264622	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	7820	False	NA	NA	False	AATAAA	-38	NA	144973452	144940032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955644_144955677_144973293
ES.25011.20	chr4	-	1128	3	Intergenic	novelGene_20631	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAATAAATAAATA	6956	False	NA	NA	False	NA	NA	NA	144991379	144986320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_144987298_144988062_144988174_144991339
ES.25011.21	chr4	-	7446	13	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9388	4140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.81028989655394	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATTTATAATTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	145032329	144989566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145032311
ES.25011.22	chr4	-	2483	4	NIC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	29684	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.25718035235908	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGGTATTTGTAGAAT	7479	False	NA	NA	False	AATAAA	-21	NA	145012033	144993700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011895
ES.25011.23	chr4	-	3506	13	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9419	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.81028989655394	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGGTATTTGTAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	145032298	144993701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145032085
ES.25011.24	chr4	-	3466	13	FSM	ENSMUSG00000028602.13	ENSMUST00000030339.13	3414	13	-48	-4	-31	4	multi-exon	FALSE	canonical	2	5	junction_11	3.685557397916	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTGGTATTTGTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	145041765	144993702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145041591
ES.25011.25	chr4	-	3317	13	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9378	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.81028989655394	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTTTGGTATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	145032339	144993705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145032311
ES.25011.26	chr4	-	3453	14	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9330	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.87597661284322	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTTTGGTATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	145032387	144993705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145029994_145030083_145032311
ES.25011.28	chr4	-	3604	14	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9404	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.87597661284322	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCCTTTGGTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	145032313	144993706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145029994_145030083_145032085
ES.25011.29	chr4	-	3422	14	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	9867	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.87597661284322	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCCTTTGGTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	145031850	144993706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145029994_145030083_145031804
ES.25011.3	chr4	-	3982	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	-164	0	-164	0	multi-exon	FALSE	canonical	3	41	junction_7	11.2546286774228	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	9859	False	NA	NA	False	AATAAA	-38	NA	144973604	144940032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.30	chr4	-	3074	10	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	20403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.94413232473044	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGCTGCCTTTGGTATT	3430	False	NA	NA	False	AATAAA	-13	NA	145021314	144993708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145021177
ES.25011.31	chr4	-	3613	14	NNC	ENSMUSG00000028602.13	novel	3414	13	NA	NA	-8695	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.44906484566918	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGCTGCCTTTGGTATT	3824	False	NA	NA	False	AATAAA	-13	NA	145050429	144993708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145048153_145048364_145050312
ES.25011.34	chr4	-	175	1	Intergenic	novelGene_20632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145002215	145002040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145002000_145002200
ES.25011.4	chr4	-	3757	9	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-43	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	22.7362595868362	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTATCTGTTTGT	9980	False	NA	NA	False	AATAAA	-37	NA	144973483	144940033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144973293
ES.25011.5	chr4	-	3818	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-17936	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.8505319094211	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTATCTGTTTGT	6959	False	NA	NA	False	AATAAA	-37	NA	144991376	144940033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144988062_144988174_144991339
ES.25011.6	chr4	-	3888	13	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-17933	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.0845271961265	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTATCTGTTTGT	6962	False	NA	NA	False	AATAAA	-37	NA	144991373	144940033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144940551_144940586_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144975363_144975473_144988062_144988174_144991339
ES.25011.7	chr4	-	3581	8	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	24.1745354301857	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGCTTATCTGTTT	7834	False	NA	NA	False	AATAAA	-35	NA	144973438	144940035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144973293
ES.25011.8	chr4	-	3765	11	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.4466780644462	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTATTTTTGCTTATC	7841	False	NA	NA	False	AATAAA	-30	NA	144973431	144940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144940551_144940586_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ES.25011.9	chr4	-	4133	13	NNC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	-18016	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	29.0816618430852	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTATTTTTGCTTATC	6879	False	NA	NA	False	AATAAA	-30	NA	144991456	144940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144975363_144975473_144976007_144976141_144988062_144988174_144991339
ES.25012.1	chr4	+	178	1	Intergenic	novelGene_20633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGACTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	145078038	145078216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145078000_145078200
ES.25013.1	chr4	+	2308	1	Intergenic	novelGene_20634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATATAGGGAGGAGAATG	NA	False	NA	NA	False	NA	NA	NA	145131570	145133878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145131600_145133900
ES.25014.1	chr4	+	5834	5	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-166	5187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.3070735290587	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGTCTCTCTTTTT	NA	False	NA	22	True	NA	NA	NA	145136648	145181513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136743_145136881_145136997_145138756_145138851_145173287_145173342_145176036
ES.25014.10	chr4	+	2385	5	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	2	1623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.6402098962939	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTGGTAACACTCT	NA	False	NA	NA	False	AATAAA	-16	NA	145136816	145177949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173287_145173342_145174429_145174574_145176036
ES.25014.100	chr4	+	174	1	Intergenic	novelGene_20639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGACAGTATA	2157	False	NA	NA	False	NA	NA	NA	145260604	145260778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145260600_145260800
ES.25014.101	chr4	+	2598	1	NIC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	21706	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1025	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	4712	False	NA	NA	False	NA	NA	NA	145263159	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145263200_145265800
ES.25014.102	chr4	+	1538	2	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	22393	-290	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAACTGTTGGCATTT	5399	False	NA	-16	True	AATACA	-15	NA	145263846	145265468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145263869_145263952
ES.25014.103	chr4	+	1298	2	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	22572	-267	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTTAATTTAAATAAACC	5578	False	NA	7	True	AATAAA	-17	NA	145264025	145265491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145264037_145264204
ES.25014.104	chr4	+	775	2	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	22611	-751	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCCTATTTCCTA	5617	False	NA	NA	False	NA	NA	NA	145264064	145265007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145264076_145264243
ES.25014.105	chr4	+	6775	1	Genic_Genomic	ENSMUSG00000078503.10	novel	NA	NA	NA	NA	24199	6669	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGAGCCTCGGTT	7205	False	NA	NA	False	AATAAA	-12	NA	145265652	145272427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145265700_145272400
ES.25014.106	chr4	+	3648	1	Intergenic	novelGene_20640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGCCTTTTTGTCTT	7784	False	NA	NA	False	NA	NA	NA	145266231	145269879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145266200_145269900
ES.25014.107	chr4	+	4788	1	Intergenic	novelGene_20641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAAAAGGCTCTGAAGT	2553	False	NA	NA	False	TATAAA	-21	NA	145270601	145275389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145270600_145275400
ES.25014.108	chr4	+	3272	1	Intergenic	novelGene_20642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTGAGTCCAGAAGAC	2563	False	NA	NA	False	AATAAA	-38	NA	145270611	145273883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145270600_145273900
ES.25014.109	chr4	+	732	1	Intergenic	novelGene_20643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGATCTGAGTGT	2679	False	NA	NA	False	NA	NA	NA	145270727	145271459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145270700_145271500
ES.25014.11	chr4	+	2746	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	3	1907	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	44.8503685108111	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136817	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173065_145173342_145176036
ES.25014.110	chr4	+	179	2	Intergenic	novelGene_20644	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTTAAAAAAAATAA	1875	False	NA	NA	False	NA	NA	NA	145276516	145277264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145276575_145277143
ES.25014.113	chr4	+	4183	2	Genic_Genomic	ENSMUSG00000080732.2	novel	138	1	NA	NA	-2132	2996	multi-exon	FALSE	canonical	1	2	junction_1	0	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTAGGGAGGAGAATG	NA	False	NA	NA	False	NA	NA	NA	145303473	145308739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145304523_145305605
ES.25014.114	chr4	+	2717	2	Genic_Genomic	ENSMUSG00000080732.2	novel	138	1	NA	NA	-1835	1827	multi-exon	FALSE	canonical	1	2	junction_1	0	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTAGTCCCTCAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	145303770	145307570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145304523_145305605
ES.25014.115	chr4	+	3854	7	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	-11	-2	intron_retention	FALSE	canonical	2	11	junction_1	34.6766812457914	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	145311724	145351913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145311995_145312083_145314001_145314095_145319501_145319572_145343640_145343746_145347127_145347255_145348721
ES.25014.116	chr4	+	3798	7	NNC	ENSMUSG00000078502.11	novel	2498	5	NA	NA	-7	-3	intron_retention	TRUE	canonical	0	0	junction_4	37.9945171483115	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAAGTTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	145311728	145351908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145311995_145312083_145314001_145314095_145319501_145319572_145343687_145343746_145347127_145347255_145348721
ES.25014.117	chr4	+	3666	5	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	15	junction_2	40.4436336151934	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	145311755	145351913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145314001_145314095_145343640_145343746_145347127_145347255_145348721
ES.25014.118	chr4	+	3630	5	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	19.4983973700404	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	145311765	145351915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311877_145314001_145314095_145343640_145343746_145347127_145347255_145348721
ES.25014.119	chr4	+	3895	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	-6	1177	multi-exon	FALSE	canonical	2	3	junction_4	97.8885080078351	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	NA	False	NA	NA	False	NA	NA	NA	145311766	145557689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.12	chr4	+	2469	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-17	-1907	4	1907	multi-exon	FALSE	canonical	3	82	junction_2	10.5	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136818	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.120	chr4	+	3851	5	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	-5	1180	multi-exon	FALSE	canonical	2	3	junction_3	37.0700350687722	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCCATCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	145311767	145557692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145551778_145551837_145552678_145552806_145554256
ES.25014.121	chr4	+	3402	3	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	4	-18647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCCTCAAATGACTCAT	NA	False	NA	NA	False	NA	NA	NA	145311776	145331138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145314001_145314120_145327982
ES.25014.122	chr4	+	665	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	5	-2029	multi-exon	FALSE	non_canonical	0	0	junction_4	98.4873595950262	1175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145311777	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.123	chr4	+	3952	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	6	1177	multi-exon	FALSE	non_canonical	0	0	junction_5	75.5544321811912	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	NA	False	NA	NA	False	NA	NA	NA	145311778	145557689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.124	chr4	+	757	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	6	-2023	multi-exon	FALSE	non_canonical	0	0	junction_5	95.6991814663706	1175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	145311778	145554489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145311995_145312083_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.125	chr4	+	778	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	9	-2004	multi-exon	FALSE	canonical	2	3	junction_5	31.9304800395415	1175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTTTTCTACCATT	NA	False	NA	NA	False	AATACA	-19	NA	145311781	145554508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516048_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.126	chr4	+	3723	6	NNC	ENSMUSG00000078502.11	novel	3595	4	NA	NA	10	-1	intron_retention	FALSE	canonical	3	11	junction_1	38.7659644533707	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	145311782	145351910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145311995_145312083_145314001_145314095_145343640_145343746_145347127_145347255_145348721
ES.25014.127	chr4	+	3592	5	NNC	ENSMUSG00000078502.11	novel	2498	5	NA	NA	12	0	intron_retention	FALSE	canonical	2	7	junction_2	42.6226172354538	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	145311784	145351915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145311905_145314001_145314095_145343687_145343746_145347127_145347255_145348721
ES.25014.128	chr4	+	3176	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	13	312	multi-exon	FALSE	non_canonical	0	0	junction_4	98.5446091879206	1201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	145311785	145556824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145312083_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.129	chr4	+	835	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	13	-2029	multi-exon	FALSE	non_canonical	0	0	junction_4	98.5446091879206	1175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145311785	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145312083_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.13	chr4	+	4723	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	4	4046	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	39.2371705854991	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTATCCTGATTTTT	NA	False	NA	21	True	ATTAAA	-17	NA	145136818	145180372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145159036_145159152_145176036
ES.25014.130	chr4	+	846	8	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	13	-2023	multi-exon	TRUE	canonical	0	0	junction_3	80.2735120366231	1175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	145311785	145554489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145519593_145519682_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.131	chr4	+	826	8	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	13	-2029	multi-exon	FALSE	non_canonical	0	0	junction_6	75.3988036499037	1175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145311785	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145311995_145312083_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.133	chr4	+	3954	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	13	1173	multi-exon	FALSE	canonical	2	3	junction_5	74.9525776000325	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATGCAATTATGTCCAT	NA	False	NA	NA	False	NA	NA	NA	145311785	145557685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.134	chr4	+	3906	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	13	1184	multi-exon	FALSE	non_canonical	0	0	junction_4	87.2894037097287	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCATCCGCTACGGCT	NA	False	NA	NA	False	NA	NA	NA	145311785	145557696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145551778_145551841_145552695_145552806_145554256
ES.25014.135	chr4	+	3892	8	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	13	1183	multi-exon	TRUE	non_canonical	0	0	junction_7	76.545837941213	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145311785	145557695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145555717_145555788
ES.25014.136	chr4	+	6559	8	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	13	3980	multi-exon	TRUE	non_canonical	0	0	junction_5	93.3488082409197	1203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATGTTTTGTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	145311785	145560492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145311995_145312083_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256_145558916_145559109
ES.25014.137	chr4	+	734	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	15	-2032	multi-exon	FALSE	non_canonical	0	0	junction_5	75.5544321811912	1175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATACAATGACTCTGT	NA	False	NA	NA	False	AAAAAG	-29	NA	145311787	145554480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.138	chr4	+	775	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	17	-2025	multi-exon	FALSE	canonical	2	3	junction_5	75.0631215859174	1175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	145311789	145554487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.139	chr4	+	3799	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	17	1176	multi-exon	FALSE	non_canonical	0	0	junction_6	96.7908684857317	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAATTATGTCCATCCG	NA	False	NA	NA	False	NA	NA	NA	145311789	145557688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145555717_145555788
ES.25014.14	chr4	+	4611	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-17	-4049	4	4049	multi-exon	FALSE	canonical	3	82	junction_2	10.5	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATCCTGATTTTTTTA	NA	False	NA	24	True	ATTAAA	-20	NA	145136818	145180375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.140	chr4	+	3893	6	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2498	5	NA	NA	17	1170	multi-exon	FALSE	non_canonical	0	0	junction_4	35.9855526565871	1201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTATGCAATTATGTC	NA	False	NA	NA	False	NA	NA	NA	145311789	145557682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145311995_145312083_145510590_145510684_145551778_145551841_145552695_145552806_145554256
ES.25014.141	chr4	+	2729	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078502.11	novel	2413	3	NA	NA	76	11	multi-exon	FALSE	canonical	2	3	junction_5	74.9525776000325	1201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCCAATTGAGAAAAATT	NA	False	NA	NA	False	AATAAA	-31	NA	145311848	145556523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.142	chr4	+	4024	2	NNC	ENSMUSG00000078502.11	novel	1221	3	NA	NA	3835	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	145347550	145351910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145349326_145349661
ES.25014.143	chr4	+	2057	2	NNC	ENSMUSG00000078502.11	novel	1221	3	NA	NA	5970	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	145349685	145351910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145349917_145350084
ES.25014.144	chr4	+	2497	5	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	2498	5	NA	NA	6893	3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145350608	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145350693_145428011_145428369_145428789_145429340_145429423_145429542_145429626
ES.25014.145	chr4	+	2365	4	Fusion	ENSMUSG00000078502.11_ENSMUSG00000058186.14	novel	3595	4	NA	NA	7081	58	multi-exon	TRUE	non_canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAACTATTTCTCATAA	NA	False	NA	NA	False	AATAAA	-13	NA	145350796	145431069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145350852_145428002_145428402_145428822_145429340_145429675
ES.25014.146	chr4	+	1277	1	Genic_Genomic	ENSMUSG00000081885.2	novel	NA	NA	NA	NA	-620	-2386	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTCAACTGGAGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	145367306	145368583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145367300_145368600
ES.25014.147	chr4	+	2428	1	Genic_Genomic	ENSMUSG00000081885.2	novel	NA	NA	NA	NA	-620	-1235	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAACGTGCTGAGATG	NA	False	NA	NA	False	NA	NA	NA	145367306	145369734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145367300_145369700
ES.25014.148	chr4	+	4072	1	Genic_Genomic	ENSMUSG00000081885.2	novel	NA	NA	NA	NA	-578	451	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATACGTTGTTAGA	NA	False	NA	NA	False	GATAAA	-9	NA	145367348	145371420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145367300_145371400
ES.25014.149	chr4	+	3910	1	Genic_Genomic	ENSMUSG00000081885.2	novel	NA	NA	NA	NA	-575	292	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATTTGAGAAG	NA	False	NA	NA	False	AATAAA	-18	NA	145367351	145371261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145367400_145371300
ES.25014.150	chr4	+	5185	1	Genic_Genomic	ENSMUSG00000081885.2	novel	NA	NA	NA	NA	-438	1704	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTAGCCACTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	145367488	145372673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145367500_145372700
ES.25014.151	chr4	+	3905	6	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	-378	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	205.595330686278	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145396876	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397188_145399301_145399395_145422720_145422806_145425813_145425941_145427474_145427955_145428205
ES.25014.152	chr4	+	4082	5	FSM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	-73	-3	-73	3	multi-exon	FALSE	canonical	3	18	junction_2	173.168992605489	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397181	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
ES.25014.153	chr4	+	4139	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-50	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	187.784344395373	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397204	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145406465_145406546_145422720_145422806_145425813_145425941_145427474
ES.25014.156	chr4	+	4068	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	146.654355543911	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397208	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422720_145422806_145425800_145425941_145427474
ES.25014.157	chr4	+	854	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-46	-1394	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	171.762918000365	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGTTTCTAGACAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	145397208	145427816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422723_145422806_145425813_145425941_145427474
ES.25014.158	chr4	+	2922	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-39	665	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	146.654355543911	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	145397215	145429875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422720_145422806_145425800_145425941_145427474
ES.25014.159	chr4	+	3804	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-37	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	150.393616885824	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397217	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422720_145422798_145425796_145425941_145427474_145427955_145428205
ES.25014.16	chr4	+	6209	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-15	-5649	6	5649	multi-exon	FALSE	canonical	3	82	junction_2	10.5	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTCGTTATAGCTTT	NA	False	NA	NA	False	NA	NA	NA	145136820	145181975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.160	chr4	+	4095	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-33	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	147.422657688701	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145397221	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145406465_145406546_145422720_145422806_145425831_145425941_145427474
ES.25014.161	chr4	+	3866	7	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	188.257801963159	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	145397221	145431009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145406465_145406546_145422720_145422806_145425813_145425941_145427474_145427955_145428205
ES.25014.162	chr4	+	924	1	Genic_Genomic	ENSMUSG00000058186.14	novel	NA	NA	NA	NA	-32	-31064	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	TATAAA	-33	NA	145397222	145398146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145397200_145398100
ES.25014.163	chr4	+	3776	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	187.01080182706	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	145397234	145431012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474_145427955_145428205
ES.25014.164	chr4	+	4378	3	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-19	-20505	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	89.5	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTGTCCCTGTGTCTC	NA	False	NA	NA	False	CATAAA	-22	NA	145397235	145408705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145404603
ES.25014.165	chr4	+	8565	3	ISM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	-14	-3	-14	3	intron_retention	FALSE	canonical	3	18	junction_2	83.5	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145397240	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145397419_145399301_145399395_145422720
ES.25014.166	chr4	+	3849	7	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.453307058905	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	145397244	145431008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145404603_145404691_145422720_145422806_145425813_145425941_145427474_145427955_145428205
ES.25014.167	chr4	+	10184	3	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_2	9	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	145397245	145431006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145399395_145422720_145427955_145428205
ES.25014.168	chr4	+	2542	3	ISM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	1	6005	1	-4204	5prime_fragment	FALSE	canonical	3	18	junction_2	83.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGTTACATGTGCC	NA	False	NA	NA	False	AATAAA	-24	NA	145397255	145425006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145397419_145399301_145399395_145422720
ES.25014.169	chr4	+	4111	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.05593537579	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145397255	145431011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145402842_145402936_145422720_145422806_145425800_145425941_145427474
ES.25014.17	chr4	+	3204	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	6	5183	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	42.5910788780937	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTTTTGAAGTCTCTCT	NA	False	NA	18	True	NA	NA	NA	145136820	145181509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145176036_145177478_145180016
ES.25014.170	chr4	+	3765	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	144.677019598829	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	145397255	145431012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422723_145422806_145425800_145425941_145427474_145427955_145428205
ES.25014.171	chr4	+	4026	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000058186.14	novel	4006	5	NA	NA	5	1182	multi-exon	FALSE	non_canonical	0	0	junction_2	66.0187262996055	877	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	145397259	145557694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145397419_145399301_145399395_145422700_145422806_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.173	chr4	+	3973	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	149.374320082135	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145397263	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422720_145422806_145425831_145425941_145427474
ES.25014.174	chr4	+	1442	3	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	9	-23413	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	89.5	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGTAGCCACTTTTC	NA	False	NA	NA	False	AATATA	-15	NA	145397263	145405797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145404603
ES.25014.175	chr4	+	4192	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	9	62	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	182.804376315229	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTATTTCTCATAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	145397263	145431073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145401077_145401211_145422720_145422806_145425813_145425941_145427474
ES.25014.176	chr4	+	4046	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.514537700937	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	145397264	145431013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145404603_145404655_145422723_145422806_145425813_145425941_145427474
ES.25014.177	chr4	+	5521	4	ISM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	15	4	15	-4	intron_retention	FALSE	canonical	3	18	junction_2	182.669708003878	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	145397269	145431007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813
ES.25014.178	chr4	+	4029	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	146.280005468964	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145397273	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145398000_145398036_145399301_145399395_145422720_145422806_145425800_145425941_145427474
ES.25014.179	chr4	+	471	3	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	27	-6246	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	81.5	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATAGCTTTATATTTT	NA	False	NA	NA	False	AATATA	-20	NA	145397281	145422964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422723
ES.25014.18	chr4	+	4466	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	13	4043	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	42.8096562315871	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACTTATCCTGATT	NA	False	NA	18	True	ATTAAA	-14	NA	145136848	145180369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145160315_145160385_145176036_145176411_145176494
ES.25014.180	chr4	+	5745	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000058186.14	novel	2413	3	NA	NA	35	3237	multi-exon	FALSE	non_canonical	0	0	junction_1	101.39526616169	879	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTATTGCTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	145397289	145559749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145397412_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145558916_145559109
ES.25014.181	chr4	+	3633	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	79	-304	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	145.720623111487	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCTAATAAAACTGG	NA	False	NA	NA	False	AATAAA	-19	NA	145397333	145430707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145397419_145399301_145399395_145422723_145422806_145425800_145425941_145427474
ES.25014.182	chr4	+	4055	7	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	1454	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	198.666946308528	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145398708	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145398752_145399301_145399395_145404603_145404691_145406465_145406546_145422720_145422806_145425813_145425941_145427474
ES.25014.183	chr4	+	3566	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	2047	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	159.914821076722	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	145399301	145431007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145399395_145422723_145422806_145425831_145425941_145427474_145427955_145428205
ES.25014.184	chr4	+	3944	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3762	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	187.21289129402	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	145401016	145431012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145422720_145422806_145425813_145425941_145427474
ES.25014.185	chr4	+	3998	5	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3783	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	211.514036177271	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145401037	145431010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145406465_145406546_145422723_145422806_145425813_145425941_145427474
ES.25014.186	chr4	+	3731	5	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3783	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	205.60520421429	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACTATTTCTCATAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	145401037	145431071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145422720_145422806_145425813_145425941_145427474_145427955_145428205
ES.25014.187	chr4	+	3921	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3796	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	165.009764020867	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145401050	145431010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145422720_145422806_145425800_145425941_145427474
ES.25014.19	chr4	+	8057	3	FSM	ENSMUSG00000083081.2_ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	13	-7525	13	902	multi-exon	FALSE	canonical	3	82	junction_2	10.5	754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	145136848	145183851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.190	chr4	+	3950	5	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3824	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.98262211161084	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	145401078	145431010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145406465_145406546_145422720_145422806_145425831_145425949_145427474
ES.25014.192	chr4	+	6767	5	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3844	2829	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	211.514036177271	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTCAGCTCAATGGTT	NA	False	NA	NA	False	TATAAA	-26	NA	145401098	145433840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145406465_145406546_145422723_145422806_145425813_145425941_145427474
ES.25014.193	chr4	+	3832	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3846	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	173.349358233597	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145401100	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145401211_145422723_145422806_145425831_145425941_145427474
ES.25014.194	chr4	+	6871	4	Fusion	ENSMUSG00000082615.2_ENSMUSG00000058186.14	novel	1938	3	NA	NA	-711	3	multi-exon	FALSE	non_canonical	0	0	junction_1	201.633881632582	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	5402	False	NA	NA	False	AATAAA	-22	NA	145415700	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145417501_145421401_145422806_145425813_145425941_145427474
ES.25014.195	chr4	+	13319	1	Genic_Genomic	ENSMUSG00000058186.14	novel	NA	NA	NA	NA	-5036	2	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	7396	False	NA	NA	False	AATAAA	-21	NA	145417694	145431013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145417700_145431000
ES.25014.196	chr4	+	3498	4	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	201.633881632582	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145422721	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145422806_145425813_145425941_145427474_145427949_145428201
ES.25014.197	chr4	+	5555	3	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	943	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	145423673	145431013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145425941_145427474_145427955_145428205
ES.25014.198	chr4	+	5510	3	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	982	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145423712	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145425941_145427474_145428121_145428369
ES.25014.199	chr4	+	2009	2	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	5008	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	145427738	145431005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145427952_145429209
ES.25014.2	chr4	+	2491	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-157	1907	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	43.0529389885935	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136657	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136743_145136881_145136997_145138756_145138851_145176036
ES.25014.20	chr4	+	4383	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	13	4043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.8096562315871	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACTTATCCTGATT	NA	False	NA	18	True	ATTAAA	-14	NA	145136848	145180369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145160315_145160385_145176036_145176318_145176484
ES.25014.200	chr4	+	2385	3	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	5226	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	145427956	145431013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145428621_145428873_145429371_145429789
ES.25014.201	chr4	+	1624	2	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	5990	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	145428720	145431013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145428766_145429434
ES.25014.202	chr4	+	1582	2	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	6286	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145429016	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145429066_145429481
ES.25014.203	chr4	+	1224	2	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	6809	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	145429539	145431014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145429551_145429801
ES.25014.204	chr4	+	2897	1	Intergenic	novelGene_20648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAATAAAAAATTT	2915	False	NA	NA	False	NA	NA	NA	145437621	145440518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145437600_145440500
ES.25014.205	chr4	+	3035	1	Intergenic	novelGene_20649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAATCAATAACAA	3285	False	NA	NA	False	NA	NA	NA	145437991	145441026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145438000_145441000
ES.25014.206	chr4	+	217	1	NIC	ENSMUSG00000082334.2	novel	1446	2	NA	NA	481	-958	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGGAGAGTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	145472796	145473013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145472800_145473000
ES.25014.207	chr4	+	178	1	Intergenic	novelGene_20650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTGTTAGGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	145481669	145481847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145481700_145481800
ES.25014.208	chr4	+	3104	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-371	-1	multi-exon	FALSE	canonical	2	3	junction_5	88.7231962654387	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATTCAAATGAGCCAA	NA	False	NA	NA	False	AATAAA	-19	NA	145500917	145556511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.209	chr4	+	2079	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-362	-2029	multi-exon	FALSE	canonical	1	1	junction_1	54.2121757541606	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145500926	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145507284_145508425_145510590_145510684_145551778_145551837_145552678_145552806_145554256
ES.25014.21	chr4	+	2069	5	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	34	4043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.0662817013884	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACTTATCCTGATT	NA	False	NA	18	True	ATTAAA	-14	NA	145136869	145180369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173287_145173342_145176036_145177478_145180016
ES.25014.210	chr4	+	964	8	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-259	-807	multi-exon	TRUE	non_canonical	0	0	junction_7	91.2905207766582	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145501029	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.211	chr4	+	4490	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-109	1729	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAACATCCAGATAATGC	NA	False	NA	NA	False	AATAAA	-20	NA	145501179	145558241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.212	chr4	+	724	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-101	-807	multi-exon	FALSE	non_canonical	0	0	junction_6	109.620050882836	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145501187	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.213	chr4	+	5528	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-96	2974	multi-exon	FALSE	non_canonical	0	0	junction_6	109.620050882836	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGTTCTGAGGATTG	NA	False	NA	NA	False	NA	NA	NA	145501192	145559486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145558916_145559109
ES.25014.214	chr4	+	3835	5	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-95	1181	multi-exon	FALSE	canonical	2	3	junction_3	26.5176827796095	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	145501193	145557693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.215	chr4	+	2609	4	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-90	6	multi-exon	FALSE	canonical	0	0	junction_1	35.1409858838492	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATGAGCCAATTGAGAA	NA	False	NA	NA	False	AATAAA	-26	NA	145501198	145556518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145551778_145551837_145552678_145552806_145554256
ES.25014.216	chr4	+	720	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-87	-2019	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGTAAACAGTTTAACT	NA	False	NA	NA	False	AATACA	-4	NA	145501201	145554493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.217	chr4	+	5224	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-85	2405	multi-exon	FALSE	canonical	2	3	junction_5	88.7231962654387	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	145501203	145558917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.218	chr4	+	6268	8	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-84	3621	multi-exon	FALSE	non_canonical	0	0	junction_7	91.3765476990007	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTAAGATTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	145501204	145560133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145516045_145516128_145541336_145541406_145551778_145551837_145552678_145552806_145554256_145558916_145559109
ES.25014.219	chr4	+	3778	4	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-84	1181	multi-exon	FALSE	canonical	0	0	junction_1	35.1409858838492	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	145501204	145557693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145551778_145551837_145552678_145552806_145554256
ES.25014.22	chr4	+	5744	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	42	5187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.2040487905669	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGTCTCTCTTTTT	NA	False	NA	22	True	NA	NA	NA	145136877	145181513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173287_145173342_145176036
ES.25014.220	chr4	+	786	8	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-79	-803	multi-exon	FALSE	canonical	0	0	junction_7	69.0412476534935	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	145501209	145625729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145516048_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554395_145625635
ES.25014.221	chr4	+	5136	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-79	2405	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	145501209	145558917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.222	chr4	+	3913	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-78	1183	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145501210	145557695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.223	chr4	+	3486	5	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-73	1177	multi-exon	FALSE	canonical	0	0	junction_4	119.05329688841	322	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	NA	False	NA	NA	False	NA	NA	NA	145501215	145557689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551822_145554530
ES.25014.224	chr4	+	2636	6	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-54	-70	multi-exon	FALSE	canonical	2	3	junction_4	108.584713472938	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAACTATTTAAGGT	NA	False	NA	NA	False	NA	NA	NA	145501234	145556442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.225	chr4	+	769	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-53	-2029	multi-exon	FALSE	canonical	1	2	junction_2	77.2040945949256	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145501235	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145526487_145526581_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.226	chr4	+	5492	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-32	2979	multi-exon	FALSE	non_canonical	0	0	junction_6	109.714401971665	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGAGGATTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	145501256	145559491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256_145558916_145559109
ES.25014.227	chr4	+	559	5	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2	novel	2413	3	NA	NA	-29	-2029	multi-exon	FALSE	canonical	2	3	junction_3	26.5176827796095	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145501259	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.228	chr4	+	675	7	Fusion	ENSMUSG00000094417.2_ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-28	-807	multi-exon	FALSE	canonical	0	0	junction_6	109.714401971665	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145501260	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145501361_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256_145554395_145625635
ES.25014.229	chr4	+	6969	8	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-44035	4185	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	154.438945072485	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATAATTCTCAG	NA	False	NA	NA	False	NA	NA	NA	145507771	145560697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145507819_145507882_145508210_145510590_145510684_145516045_145516128_145551778_145551841_145552695_145552806_145554256_145558916_145559108
ES.25014.23	chr4	+	3447	4	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14362	4035	multi-exon	FALSE	canonical	0	0	junction_3	40.7621829095984	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGATCCATTCCAACTAA	NA	False	NA	2	True	NA	NA	NA	145158947	145181493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145176036_145177734_145180016
ES.25014.230	chr4	+	4808	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43794	2031	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGATGCCAGTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	145508012	145558543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.231	chr4	+	2756	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43789	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.921200581255	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	145508017	145556509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.232	chr4	+	4496	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43789	1724	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCGATGTAACATCCAGAT	NA	False	NA	NA	False	AATAAA	-15	NA	145508017	145558236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.233	chr4	+	4030	7	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43782	1183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	146.064673651396	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145508024	145557695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.234	chr4	+	2712	5	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43782	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	174.308634324293	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATGAGCCAATTGAGAA	NA	False	NA	NA	False	AATAAA	-26	NA	145508024	145556518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145551778_145551841_145552695_145552806_145554256
ES.25014.235	chr4	+	968	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43776	-2029	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.2258030957674	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508030	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508425_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.236	chr4	+	3929	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43763	1183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145508043	145557695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.237	chr4	+	3873	5	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43763	1173	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	173.748920859958	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATGCAATTATGTCCAT	NA	False	NA	NA	False	NA	NA	NA	145508043	145557685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145551778_145551837_145552678_145552806_145554256
ES.25014.238	chr4	+	4135	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43752	1185	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.0898582096069	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	145508054	145557697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508425_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.239	chr4	+	4085	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43746	1185	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	111.708549359483	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	145508060	145557697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508381_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.24	chr4	+	4398	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14340	2914	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTATCCTGATTTTT	NA	False	NA	21	True	ATTAAA	-17	NA	145158969	145180372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145159032_145176036
ES.25014.240	chr4	+	893	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-43745	-807	multi-exon	FALSE	non_canonical	0	0	junction_6	112.83567205848	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508061	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145508381_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.241	chr4	+	696	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-43742	-807	multi-exon	FALSE	non_canonical	0	0	junction_6	161.611416675927	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508064	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.242	chr4	+	3249	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43736	315	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.0898582096069	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-25	NA	145508070	145556827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508425_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.243	chr4	+	2745	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43736	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.466693855354	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	145508070	145556515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.244	chr4	+	5388	7	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43736	2587	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	146.064673651396	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAACAAATGTAAACGCAA	NA	False	NA	NA	False	NA	NA	NA	145508070	145559099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.245	chr4	+	257	3	Intergenic	novelGene_20652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	244	junction_2	92.5	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145508071	145516071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145508210_145510590_145510684_145516045
ES.25014.246	chr4	+	752	6	NNC	ENSMUSG00000078500.4	novel	1427	4	NA	NA	-87292	-790	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	136.957511659638	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTAAGTTTGTTTT	NA	False	NA	NA	False	AATACA	-11	NA	145508071	145625742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145618982_145619087_145623213_145623341_145625498
ES.25014.247	chr4	+	1999	6	NNC	ENSMUSG00000078500.4	novel	1427	4	NA	NA	-87292	-4187	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_5	102.947753739458	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGTATACAAT	NA	False	NA	NA	False	NA	NA	NA	145508071	145622345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508131_145510590_145510684_145541336_145541383_145598857_145598909_145618982_145619087_145620699
ES.25014.248	chr4	+	3480	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43735	762	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTTATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	145508071	145557274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.249	chr4	+	462	3	Intergenic	novelGene_20653	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	111	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGGGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145508072	145516062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145508381_145510590_145510684_145516001
ES.25014.25	chr4	+	2500	4	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14338	775	multi-exon	FALSE	non_canonical	0	0	junction_2	40.7621829095984	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145158971	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145173287_145173342_145176036
ES.25014.250	chr4	+	3121	7	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43733	312	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	152.648834475297	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	145508073	145556824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145526487_145526581_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.251	chr4	+	858	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-43733	-807	multi-exon	FALSE	non_canonical	0	0	junction_6	112.739744544681	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508073	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145508381_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.252	chr4	+	889	7	Fusion	ENSMUSG00000084350.2_ENSMUSG00000078500.4	novel	2413	3	NA	NA	-43724	-807	multi-exon	FALSE	non_canonical	0	0	junction_1	101.39526616169	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508082	145625725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145508421_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256_145554420_145625661
ES.25014.253	chr4	+	413	3	Intergenic	novelGene_20654	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	237	junction_1	3.5	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	145508086	145516071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145508381_145510590_145510684_145516045
ES.25014.254	chr4	+	3018	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43720	315	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-25	NA	145508086	145556827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.255	chr4	+	2813	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43720	110	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTTCGAGTATTCAGT	NA	False	NA	NA	False	NA	NA	NA	145508086	145556622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.256	chr4	+	696	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43719	-2029	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.466693855354	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508087	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.257	chr4	+	888	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43719	-2029	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.0898582096069	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	145508087	145554483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508425_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
ES.25014.258	chr4	+	3687	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43719	747	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	99.2258030957674	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACGAACATACAAAAACTTCA	NA	False	NA	NA	False	AATAAA	-35	NA	145508087	145557259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508425_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.259	chr4	+	2972	7	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43717	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	92.4026514771086	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTAATTCAAATGAGC	NA	False	NA	NA	False	AATAAA	-16	NA	145508089	145556508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508381_145510590_145510684_145516045_145516128_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.26	chr4	+	2375	2	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14338	773	multi-exon	FALSE	canonical	3	59	junction_1	0	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	NA	False	NA	17	True	NA	NA	NA	145158971	145178231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036
ES.25014.260	chr4	+	3038	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43717	315	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.466693855354	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-25	NA	145508089	145556827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145508210_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
ES.25014.261	chr4	+	3727	3	Genic_Genomic	ENSMUSG00000096233.2	novel	780	1	NA	NA	-229	8421	multi-exon	FALSE	canonical	0	0	junction_2	8	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGAGCACTGGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	145563559	145572989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145565060_145569569_145570051_145571243
ES.25014.27	chr4	+	4516	2	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14338	2914	multi-exon	FALSE	canonical	3	59	junction_1	0	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTATCCTGATTTTT	NA	False	NA	21	True	ATTAAA	-17	NA	145158971	145180372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036
ES.25014.28	chr4	+	3728	3	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14338	2914	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	16.5	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTATCCTGATTTTT	NA	False	NA	21	True	ATTAAA	-17	NA	145158971	145180372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145159032_145176036_145176495_145177162
ES.25014.29	chr4	+	4710	6	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14338	91942	multi-exon	FALSE	non_canonical	0	0	junction_2	23.6	1668	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAATGTGTTCTTATT	NA	False	NA	20	True	NA	NA	NA	145158971	145269400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036_145176318_145176484_145180385_145262466_145262552_145268910_145268959_145269184
ES.25014.3	chr4	+	2672	5	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-15	1907	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	41.9665045006133	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136799	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145159036_145159152_145160315_145160385_145176036
ES.25014.30	chr4	+	4564	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14336	2910	multi-exon	FALSE	non_canonical	0	0	junction_1	48.5	723	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACTTATCCTGAT	NA	False	NA	17	True	ATTAAA	-13	NA	145158973	145180368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145173287_145173342_145176036
ES.25014.31	chr4	+	2427	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14334	775	multi-exon	FALSE	non_canonical	0	0	junction_1	48.5	688	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145158975	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145173287_145173342_145176036
ES.25014.32	chr4	+	4568	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14314	2921	multi-exon	FALSE	canonical	3	28	junction_1	34.5	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGATTTTTTTAATTC	NA	False	NA	28	True	ATTAAA	-24	NA	145158995	145180379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145176036
ES.25014.33	chr4	+	2247	4	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14313	768	multi-exon	FALSE	non_canonical	0	0	junction_3	40.7621829095984	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACAAGTTTGCTTTGG	NA	False	NA	12	True	NA	NA	NA	145158996	145178226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145176036_145176318_145176484
ES.25014.34	chr4	+	5690	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14304	4053	multi-exon	FALSE	canonical	3	28	junction_1	34.5	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAAGTCTCTCTTT	NA	False	NA	20	True	NA	NA	NA	145159005	145181511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145176036
ES.25014.35	chr4	+	2233	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	775	multi-exon	FALSE	non_canonical	0	0	junction_1	0	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145159006	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159210_145176036_145176318_145176484
ES.25014.36	chr4	+	2411	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	775	multi-exon	FALSE	canonical	3	28	junction_1	34.5	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145159006	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145160315_145160385_145176036
ES.25014.37	chr4	+	3572	2	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	772	multi-exon	FALSE	canonical	3	97	junction_1	0	688	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGTTTGCTTTGGTTGT	NA	False	NA	16	True	NA	NA	NA	145159006	145178230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145160385_145176036
ES.25014.38	chr4	+	5620	2	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	4053	multi-exon	FALSE	canonical	3	59	junction_1	0	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAAGTCTCTCTTT	NA	False	NA	20	True	NA	NA	NA	145159006	145181511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036
ES.25014.39	chr4	+	5674	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14303	4053	multi-exon	FALSE	non_canonical	0	0	junction_1	48.5	739	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAAGTCTCTCTTT	NA	False	NA	20	True	NA	NA	NA	145159006	145181511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145173287_145173342_145176036
ES.25014.4	chr4	+	4685	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-12	4054	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.2040487905669	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATTTTTTTAATTCA	NA	False	NA	29	True	ATTAAA	-25	NA	145136802	145180380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173288_145173342_145176036
ES.25014.40	chr4	+	2526	4	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14303	775	multi-exon	TRUE	non_canonical	0	0	junction_1	45.7262385167301	688	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145159006	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145173065_145173196_145173287_145173342_145176036
ES.25014.41	chr4	+	4404	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	2921	multi-exon	FALSE	non_canonical	0	0	junction_2	29.5	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGATTTTTTTAATTC	NA	False	NA	28	True	ATTAAA	-24	NA	145159006	145180379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036_145176411_145176494
ES.25014.42	chr4	+	3080	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	4052	multi-exon	FALSE	canonical	2	4	junction_2	27.5	739	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTGAAGTCTCTCTT	NA	False	NA	19	True	NA	NA	NA	145159006	145181510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036_145177478_145180016
ES.25014.43	chr4	+	4311	3	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	375	3	NA	NA	-14303	2911	multi-exon	FALSE	non_canonical	0	0	junction_2	29.5	723	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACTTATCCTGATT	NA	False	NA	18	True	ATTAAA	-14	NA	145159006	145180369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145176036_145176318_145176484
ES.25014.44	chr4	+	466	4	Fusion	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	1575	3	NA	NA	-14286	-136	multi-exon	FALSE	non_canonical	0	0	junction_1	45.7262385167301	590	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAATGTGACAAATGCT	NA	False	NA	-69	True	NA	NA	NA	145159023	145176190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145159152_145173065_145173196_145173287_145173342_145176036
ES.25014.45	chr4	+	8239	1	Genic_Genomic	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	NA	NA	NA	NA	-3315	775	mono-exon	FALSE	NA	NA	NA	NA	NA	680	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145169994	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145170000_145178200
ES.25014.46	chr4	+	10177	1	Genic_Genomic	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	NA	NA	NA	NA	-3117	2911	mono-exon	FALSE	NA	NA	NA	NA	NA	715	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACTTATCCTGATT	NA	False	NA	18	True	ATTAAA	-14	NA	145170192	145180369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145170200_145180400
ES.25014.47	chr4	+	4434	4	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	-2963	777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7262385167301	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	21	True	NA	NA	NA	145170346	145178235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145173196_145173287_145173342_145176036_145176495_145177162
ES.25014.48	chr4	+	7754	1	Genic_Genomic	ENSMUSG00000085101.8_ENSMUSG00000082082.2	novel	NA	NA	NA	NA	447	4052	mono-exon	FALSE	NA	NA	NA	NA	NA	731	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTGAAGTCTCTCTT	NA	False	NA	19	True	NA	NA	NA	145173756	145181510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145173800_145181500
ES.25014.49	chr4	+	9236	1	FSM	ENSMUSG00000083081.2	ENSMUST00000118609.2	747	1	-7591	-898	-7591	898	mono-exon	FALSE	NA	NA	NA	NA	NA	746	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTGCGGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	145174611	145183847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145174600_145183800
ES.25014.5	chr4	+	2538	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-11	1907	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.2040487905669	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	19	True	NA	NA	NA	145136803	145178233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136997_145138756_145138851_145173287_145173342_145176036
ES.25014.50	chr4	+	2064	2	NNC	ENSMUSG00000082082.2	novel	1575	3	NA	NA	2768	768	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	680	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACAAGTTTGCTTTGG	NA	False	NA	12	True	NA	NA	NA	145176077	145178226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145176445_145176529
ES.25014.51	chr4	+	1944	3	Fusion	ENSMUSG00000078503.10_ENSMUSG00000082082.2	novel	1575	3	NA	NA	3012	-206	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACCCAGACAGCATATT	NA	False	NA	68	True	AATAAA	-44	NA	145176321	145265552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145176592_145177259_145177343_145263961
ES.25014.53	chr4	+	9658	1	FSM	ENSMUSG00000083081.2	ENSMUST00000118609.2	747	1	-4791	-4120	-4791	4120	mono-exon	FALSE	NA	NA	NA	NA	NA	751	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGTTGTCCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	145177411	145187069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145177400_145187100
ES.25014.54	chr4	+	3622	4	Genic_Genomic	ENSMUSG00000083562.2	novel	747	1	NA	NA	-178154	4118	multi-exon	TRUE	non_canonical	0	0	junction_1	2.35702260395516	1610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTTGTCCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	145180919	145363938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145181074_145357955_145360312_145360765_145360887_145362947
ES.25014.55	chr4	+	3254	1	FSM	ENSMUSG00000083081.2	ENSMUST00000118609.2	747	1	-1170	-1337	-1170	1337	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCAGCGGAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	145181032	145184286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145181000_145184300
ES.25014.56	chr4	+	5119	1	FSM	ENSMUSG00000052912.8	ENSMUST00000121843.2	3123	1	-376	-1620	-282	1620	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTGAAAATTCTCTG	NA	False	NA	NA	False	NA	NA	NA	145190491	145195610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145190500_145195600
ES.25014.57	chr4	+	3444	2	Genic_Genomic	ENSMUSG00000052912.8	novel	1284	1	NA	NA	-110	221	multi-exon	FALSE	canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAGAATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	145190663	145194211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145193935_145194038
ES.25014.58	chr4	+	7422	3	Genic_Genomic	ENSMUSG00000052912.8	novel	1284	1	NA	NA	-108	18270	multi-exon	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTGGCATCGTTCT	NA	False	NA	NA	False	NA	NA	NA	145190665	145212260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145193935_145207902_145208055_145208259
ES.25014.59	chr4	+	5405	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-33	-2376	-33	2376	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTTTTCCTGTTTTT	861	False	NA	NA	False	NA	NA	NA	145237295	145268134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.6	chr4	+	5764	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-32	-5187	-11	5187	multi-exon	FALSE	canonical	3	82	junction_2	10.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGTCTCTCTTTTT	NA	False	NA	22	True	NA	NA	NA	145136803	145181513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.60	chr4	+	5219	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	-23	-1	intron_retention	FALSE	canonical	2	3	junction_2	216.361965234188	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	871	False	NA	NA	False	NA	NA	NA	145237305	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145247375_145247456_145255260_145257486_145261385_145261513_145263160
ES.25014.61	chr4	+	3118	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-23	-99	-23	99	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAAACCTGTA	871	False	NA	NA	False	AATAAA	-19	NA	145237305	145265857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.62	chr4	+	3098	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	211.475028076603	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	871	False	NA	NA	False	NA	NA	NA	145237305	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.63	chr4	+	6664	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-22	-3646	-22	3646	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTTCTTATTACCA	872	False	NA	24	True	NA	NA	NA	145237306	145269404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.64	chr4	+	2679	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-22	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	204.063715540024	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	872	False	NA	NA	False	NA	NA	NA	145237306	145265755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160_145264374_145264709
ES.25014.65	chr4	+	1089	1	Genic_Genomic	ENSMUSG00000078503.10	novel	NA	NA	NA	NA	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATACAAAAAAAGAAAAAA	881	False	NA	NA	False	NA	NA	NA	145237315	145238404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145237300_145238400
ES.25014.67	chr4	+	2774	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	-12	234	-12	-234	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	882	False	NA	40	True	AATAAA	-16	NA	145237316	145265524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.68	chr4	+	3121	4	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-9	99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	226.004916367371	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAAACCTGTA	885	False	NA	NA	False	AATAAA	-19	NA	145237319	145265857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145257381_145257486_145261368_145261513_145263160
ES.25014.69	chr4	+	3123	4	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-9	89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.962960031426	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCATGAATATTTTTG	885	False	NA	NA	False	AATAAA	-9	NA	145237319	145265847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237525_145257381_145257486_145261385_145261513_145263160
ES.25014.7	chr4	+	462	4	NNC	ENSMUSG00000085101.8	novel	545	3	NA	NA	-6	-59	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	35.5058680596133	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGCAGTGGATGTGAC	NA	False	NA	8	True	NA	NA	NA	145136808	145176267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145136877_145138756_145138851_145160315_145160385_145176036
ES.25014.70	chr4	+	2981	4	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	223.290543164431	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	890	False	NA	NA	False	NA	NA	NA	145237324	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145257381_145257486_145261403_145261513_145263160
ES.25014.71	chr4	+	2868	3	NIC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	77.5	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	894	False	NA	NA	False	NA	NA	NA	145237328	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145257381_145257486_145263160
ES.25014.72	chr4	+	2477	6	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	0	-234	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	208.877380297628	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	894	False	NA	40	True	AATAAA	-16	NA	145237328	145265524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145245504_145245556_145257381_145257486_145261385_145261513_145263160_145263972_145264307
ES.25014.73	chr4	+	3142	6	NNC	ENSMUSG00000078503.10	novel	597	5	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	205.412365742669	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	902	False	NA	NA	False	NA	NA	NA	145237336	145265755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145239562_145239640_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.74	chr4	+	2235	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	11	750	-7	-750	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGGCCTATTTCCTAA	905	False	NA	NA	False	NA	NA	NA	145237339	145265008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.76	chr4	+	2855	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-7	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.443251190051	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	905	False	NA	40	True	AATAAA	-16	NA	145237339	145265524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145239546_145239651_145257381_145257486_145261385_145261513_145263160
ES.25014.77	chr4	+	6696	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	1	3639	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	211.475028076603	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGGAAAATGTGTTCTT	913	False	NA	17	True	NA	NA	NA	145237347	145269397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.78	chr4	+	2974	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	19	3	1	-3	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTGATTGTTTCC	913	False	NA	NA	False	NA	NA	NA	145237347	145265755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ES.25014.79	chr4	+	3150	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	222.264903887231	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	913	False	NA	NA	False	NA	NA	NA	145237347	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145255260_145255435_145257381_145257486_145261385_145261513_145263160
ES.25014.8	chr4	+	5336	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	-21	-4770	0	4770	multi-exon	FALSE	canonical	3	82	junction_2	10.5	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAGATCAACAGGCTC	NA	False	NA	NA	False	NA	NA	NA	145136814	145181096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145136997_145138756_145138851_145176036
ES.25014.80	chr4	+	6689	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	1	3635	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	221.20281982832	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAGTGGAAAATGTGT	913	False	NA	13	True	NA	NA	NA	145237347	145269393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145239562_145239640_145257381_145257486_145261385_145261513_145263160
ES.25014.81	chr4	+	2331	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	1	-750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.443251190051	1018	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGGCCTATTTCCTAA	913	False	NA	NA	False	NA	NA	NA	145237347	145265008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145239546_145239651_145257381_145257486_145261385_145261513_145263160
ES.25014.82	chr4	+	3158	5	NIC	ENSMUSG00000078503.10	novel	597	5	NA	NA	1	101	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	211.475028076603	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGCAAACCTGTATC	913	False	NA	NA	False	AATAAA	-21	NA	145237347	145265859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145237496_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.83	chr4	+	2794	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	1	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.443251190051	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	913	False	NA	40	True	AATAAA	-16	NA	145237347	145265524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237496_145245504_145245556_145257381_145257486_145261385_145261513_145263160
ES.25014.84	chr4	+	2869	5	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	-6	-263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.443251190051	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTTAAATAAACCAATT	920	False	NA	11	True	AATAAA	-21	NA	145237354	145265495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145237555_145239547_145239651_145257381_145257486_145261385_145261513_145263160
ES.25014.85	chr4	+	4040	8	Fusion	ENSMUSG00000078503.10_ENSMUSG00000084350.2	novel	597	5	NA	NA	15	1183	multi-exon	TRUE	non_canonical	0	0	junction_1	81.3646365544187	2221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	941	False	NA	NA	False	NA	NA	NA	145237375	145557695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145237496_145311995_145312084_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551841_145552695_145552806_145554256
ES.25014.86	chr4	+	3031	4	NIC	ENSMUSG00000078503.10	novel	3044	5	NA	NA	-68	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	226.592634969061	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	4951	False	NA	NA	False	NA	NA	NA	145241385	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145241589_145257381_145257486_145261385_145261513_145263160
ES.25014.87	chr4	+	2822	4	NNC	ENSMUSG00000078503.10	novel	3044	5	NA	NA	-41	-242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.962960031426	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAATATCCTTAAAAG	4978	False	NA	32	True	AATAAA	-42	NA	145241412	145265516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145241648_145257381_145257486_145261385_145261513_145263160
ES.25014.88	chr4	+	2738	4	NIC	ENSMUSG00000078503.10	novel	3044	5	NA	NA	-14	-240	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	226.592634969061	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATCCTTAAAAGAG	5005	False	NA	34	True	AATAAA	-44	NA	145241439	145265518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145241589_145257381_145257486_145261385_145261513_145263160
ES.25014.89	chr4	+	6613	4	NIC	ENSMUSG00000078503.10	novel	3044	5	NA	NA	-13	3636	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	226.592634969061	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTGGAAAATGTGTT	5006	False	NA	14	True	NA	NA	NA	145241440	145269394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_145241589_145257381_145257486_145261385_145261513_145263160
ES.25014.90	chr4	+	6686	5	FSM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	-4	-3638	-4	3638	multi-exon	FALSE	canonical	2	9	junction_1	215.70972972956	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGAAAATGTGTTCT	5015	False	NA	16	True	NA	NA	NA	145241449	145269396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145241589_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.91	chr4	+	2587	6	Fusion	ENSMUSG00000078503.10_ENSMUSG00000078502.11	novel	1221	3	NA	NA	8	4	multi-exon	TRUE	canonical	0	0	junction_1	22.0544780033444	1496	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTTGTTTTCAATTT	5027	False	NA	NA	False	NA	NA	NA	145241461	145351919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145241589_145245504_145245591_145343687_145343746_145347127_145347255_145348721_145349454_145350462
ES.25014.92	chr4	+	2529	5	Fusion	ENSMUSG00000078503.10_ENSMUSG00000078502.11	novel	1221	3	NA	NA	9	-9	multi-exon	TRUE	non_canonical	0	0	junction_4	21.5580611373101	1496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTCAACAAGTTTGCT	5028	False	NA	NA	False	NA	NA	NA	145241462	145351902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145241589_145343640_145343746_145347127_145347255_145348721_145349460_145350469
ES.25014.93	chr4	+	2544	6	Fusion	ENSMUSG00000078503.10_ENSMUSG00000078502.11	novel	1221	3	NA	NA	13	1	multi-exon	FALSE	canonical	0	0	junction_1	22.0544780033444	1496	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	5032	False	NA	NA	False	NA	NA	NA	145241466	145351916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145241589_145245504_145245556_145343687_145343746_145347127_145347255_145348721_145349454_145350462
ES.25014.94	chr4	+	2534	5	Fusion	ENSMUSG00000078503.10_ENSMUSG00000078502.11	novel	1221	3	NA	NA	20	2	multi-exon	FALSE	canonical	0	0	junction_4	21.5580611373101	1496	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	5039	False	NA	NA	False	NA	NA	NA	145241473	145351917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_145241589_145343640_145343746_145347127_145347255_145348721_145349454_145350462
ES.25014.95	chr4	+	5984	4	ISM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	2846	1	2846	-1	3prime_fragment	FALSE	canonical	3	30	junction_1	225.163644193877	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	2339	False	NA	NA	False	NA	NA	NA	145244299	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145247456_145257381_145257486_145261385_145261513_145263160
ES.25014.96	chr4	+	4955	4	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	17403	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	253.615632185575	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	409	False	NA	NA	False	NA	NA	NA	145258856	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145261513_145263160_145264705_145264788_145265498_145265711
ES.25014.97	chr4	+	4774	2	ISM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	17649	234	17649	-234	3prime_fragment	FALSE	canonical	3	538	junction_1	0	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTTAAAAGAGTATCTG	655	False	NA	40	True	AATAAA	-16	NA	145259102	145265524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145261513_145263160
ES.25014.98	chr4	+	3669	3	NNC	ENSMUSG00000078503.10	novel	2996	4	NA	NA	18040	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATTTGCTTTGATTGT	1046	False	NA	NA	False	NA	NA	NA	145259493	145265751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_145259777_145260717_145261513_145263160
ES.25014.99	chr4	+	3539	2	ISM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	19117	1	19117	-1	3prime_fragment	FALSE	canonical	3	538	junction_1	0	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGATTGTTTCCAA	2123	False	NA	NA	False	NA	NA	NA	145260570	145265757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_145261513_145263160
ES.25015.1	chr4	-	174	1	Intergenic	novelGene_20635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATAGGGTACTCAG	NA	False	NA	NA	False	NA	NA	NA	145152583	145152409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145152400_145152600
ES.25016.1	chr4	-	902	1	Intergenic	novelGene_20636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAAAAAAAGCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	145165551	145164649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145164600_145165600
ES.25016.2	chr4	-	160	1	Intergenic	novelGene_20637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	145165551	145165391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145165400_145165600
ES.25017.1	chr4	-	10289	2	Antisense	novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	221	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAAATTCTCGCTAA	NA	False	NA	NA	False	NA	NA	NA	145180284	145169911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145176433_145176516
ES.25017.2	chr4	-	4963	5	Antisense	novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAAATTCTCGCTAA	NA	False	NA	NA	False	NA	NA	NA	145180284	145169911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145173196_145173287_145173339_145176033_145176404_145176487_145177476_145180014
ES.25017.3	chr4	-	7594	3	Antisense	novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAAATTCTCGCTAA	NA	False	NA	NA	False	NA	NA	NA	145180284	145169911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145173339_145176033_145176404_145176487
ES.25017.4	chr4	-	10275	2	Antisense	novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	145180284	145169927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145176420_145176501
ES.25017.5	chr4	-	5075	2	Antisense	novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	145175659	145169927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145170402_145171058
ES.25017.6	chr4	-	7394	1	Antisense	novelGene_ENSMUSG00000085101.8_AS_novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGGTCGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	145180284	145172890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145172900_145180300
ES.25017.7	chr4	-	4264	1	Antisense	novelGene_ENSMUSG00000085101.8_AS_novelGene_ENSMUSG00000082082.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTGGGGGGCAATTAGAG	NA	False	NA	NA	False	NA	NA	NA	145180285	145176021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145176000_145180300
ES.25018.1	chr4	-	13275	2	Intergenic	novelGene_20638	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCATGAATGAATTTGA	NA	False	NA	NA	False	NA	NA	NA	145604165	145237790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145238205_145591304
ES.25018.2	chr4	-	223	1	Intergenic	novelGene_20645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	145303319	145303096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145303100_145303300
ES.25018.3	chr4	-	266	1	Intergenic	novelGene_20646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAACAAGACATA	NA	False	NA	NA	False	NA	NA	NA	145323072	145322806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145322800_145323100
ES.25018.4	chr4	-	154	1	Intergenic	novelGene_20647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	145323072	145322918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145322900_145323100
ES.25018.5	chr4	-	173	1	Intergenic	novelGene_20651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	145491830	145491657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145491700_145491800
ES.25018.6	chr4	-	819	2	Antisense	novelGene_ENSMUSG00000094417.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTTCTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	145501695	145500692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_145501467_145501650
ES.25018.7	chr4	-	2338	1	Intergenic	novelGene_20655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTAAGAATGTATGACA	NA	False	NA	NA	False	NA	NA	NA	145517811	145515473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145515500_145517800
ES.25018.8	chr4	-	189	1	Intergenic	novelGene_20656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGCAAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	145519081	145518892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145518900_145519100
ES.25018.9	chr4	-	1881	1	Intergenic	novelGene_20657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	145525044	145523163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_145523200_145525000
ES.25019.1	chr4	+	3054	1	Intergenic	novelGene_20658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGATTTTTTTATTCA	NA	False	NA	22	True	ATTAAA	-24	NA	145986558	145989612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145986600_145989600
ES.25019.2	chr4	+	724	1	Intergenic	novelGene_20659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTTGTTTTCAACT	NA	False	NA	26	True	NA	NA	NA	145986754	145987478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145986800_145987500
ES.25019.3	chr4	+	3560	1	Intergenic	novelGene_20660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCATTGTAAAATTAGGA	NA	False	NA	17	True	AATAAA	-19	NA	145988934	145992494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145988900_145992500
ES.25019.4	chr4	+	5434	1	Intergenic	novelGene_20661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCCACTCGTTATAGT	NA	False	NA	NA	False	NA	NA	NA	145989669	145995103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145989700_145995100
ES.25019.5	chr4	+	823	1	Intergenic	novelGene_20662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGACCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	145989919	145990742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145989900_145990700
ES.25019.6	chr4	+	7974	2	Genic_Genomic	ENSMUSG00000081595.2	novel	748	1	NA	NA	-3099	4463	multi-exon	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCGGTTGTCCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	145992246	146000556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145998462_145998797
ES.25019.7	chr4	+	1882	1	Intergenic	novelGene_20663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAAATAAGATCAACAG	NA	False	NA	NA	False	NA	NA	NA	145992335	145994217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_145992300_145994200
ES.25019.8	chr4	+	5256	1	FSM	ENSMUSG00000081595.2	ENSMUST00000117799.2	748	1	-47	-4461	-47	4461	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	145995298	146000554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_145995300_146000600
ES.25019.9	chr4	+	1033	2	Genic_Genomic	ENSMUSG00000081595.2	novel	748	1	NA	NA	616	4461	multi-exon	TRUE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	145995961	146000554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_145996781_146000340
ES.2502.1	chr10	-	4098	4	NNC	ENSMUSG00000112803.2	novel	542	3	NA	NA	27	3424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTACTTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	25583814	25573883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25577665_25581610_25581746_25581862_25582022_25583791
ES.2502.2	chr10	-	4134	3	FSM	ENSMUSG00000112803.2	ENSMUST00000217933.2	542	3	-172	-3420	-172	3420	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCCAGTCTACTTGTCA	NA	False	NA	NA	False	NA	NA	NA	25584013	25573887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_25577665_25581610_25581746_25583791
ES.25020.1	chr4	+	3832	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-426	-229	-426	229	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGAGAAGTTTAATCA	NA	False	NA	NA	False	AATAAA	-25	NA	146003895	146007727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146003900_146007700
ES.25020.2	chr4	+	5239	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-416	-1646	-416	1646	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTCTGGCAATCATT	NA	False	NA	NA	False	NA	NA	NA	146003905	146009144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146003900_146009100
ES.25020.4	chr4	+	4225	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	-370	-678	-370	678	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCCACAAAG	NA	False	NA	NA	False	NA	NA	NA	146003951	146008176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146004000_146008200
ES.25020.5	chr4	+	1747	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	1810	-380	1810	380	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATATACATTGTTAGA	NA	False	NA	NA	False	GATAAA	-9	NA	146006131	146007878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146006100_146007900
ES.25021.1	chr4	-	197	1	Intergenic	novelGene_20664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTTACACTAACACAAC	NA	False	NA	NA	False	NA	NA	NA	146029565	146029368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146029400_146029600
ES.25022.1	chr4	+	3059	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-258	-3	-211	3	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033656	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ES.25022.10	chr4	+	2834	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-30	86	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGACTGAAGTCATGAAC	NA	False	NA	NA	False	AATAAA	-2	NA	146033837	146063277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146034017_146054375_146054480_146060726
ES.25022.100	chr4	+	3984	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	190.233190234161	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093399	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132079_146132161_146132791_146132961
ES.25022.101	chr4	+	6291	8	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	2631	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	50.8495178874663	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGGTTTCTAACTCTT	NA	False	NA	NA	False	NA	NA	NA	146093399	146137956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146102109_146102186_146126781_146126867_146129863_146130004_146131535_146132094_146132514_146133333_146133584
ES.25022.102	chr4	+	4039	8	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.2289959374238	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093399	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146102109_146102186_146126784_146126867_146129894_146130004_146131535_146132094_146132178_146132766_146132934
ES.25022.103	chr4	+	3990	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	190.233190234161	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146093399	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132158_146132243_146132766_146132934
ES.25022.104	chr4	+	2757	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	258230	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.3457826043393	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146093399	146393555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392570_146392651
ES.25022.106	chr4	+	4153	8	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	173.875512587457	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146093399	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146102109_146102186_146126781_146126867_146129876_146130004_146131535_146132073_146132156_146132940_146133023
ES.25022.107	chr4	+	4053	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.0898989771738	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093400	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129894_146130004_146131535_146133864_146134026
ES.25022.108	chr4	+	4084	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	39.3425977789978	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146093400	146135324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129863_146130004_146131535_146133824_146133991
ES.25022.109	chr4	+	4252	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	34.5931712914558	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146093405	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129863_146130004_146131535
ES.25022.11	chr4	+	4643	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.2663752908187	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033838	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146041696_146043631_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.110	chr4	+	4711	2	FSM	ENSMUSG00000066007.16	ENSMUST00000151278.8	724	2	16	-4003	16	4003	multi-exon	FALSE	canonical	3	50	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAATATGAACTAACC	NA	False	NA	NA	False	NA	NA	NA	146093409	146099500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146093548_146094927
ES.25022.111	chr4	+	3979	7	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	17	41590	multi-exon	FALSE	canonical	0	0	junction_1	87.0780301415537	1174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146093410	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.112	chr4	+	3985	7	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	26	41582	multi-exon	FALSE	canonical	0	0	junction_1	87.8173609765682	1174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCAATTATGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	146093419	146256586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.113	chr4	+	3915	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	32	297	32	-297	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTAATAAAACTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	146093425	146135022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ES.25022.114	chr4	+	5376	7	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	33	43002	multi-exon	FALSE	canonical	0	0	junction_1	36.0462665658086	1175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146093426	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146093548_146209452_146209546_146214925_146215005_146240246_146240293_146250678_146250741_146251579_146251707_146253158
ES.25022.115	chr4	+	4284	6	NIC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	35	-1	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	180.816592159016	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146093428	146135318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146093548_146094927_146095022_146102109_146102186_146126781_146126867_146129876_146130004_146131535
ES.25022.116	chr4	+	678	6	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	44	38398	multi-exon	FALSE	canonical	0	0	junction_1	39.9699887415546	1122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTAACTTTGTTTT	NA	False	NA	NA	False	AATACA	-11	NA	146093437	146253402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146093548_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.117	chr4	+	2871	7	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066007.16	novel	4244	5	NA	NA	51	40516	multi-exon	FALSE	canonical	0	0	junction_1	87.0780301415537	1166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTGCTTCGAGTATT	NA	False	NA	NA	False	TATAAA	-15	NA	146093444	146255520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146093548_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.118	chr4	+	2331	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-1781	-1130	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	196.66758474362	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTCAATGTGACAAATGA	NA	False	NA	NA	False	NA	NA	NA	146096697	146134189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146096839_146126781_146126867_146129876_146130004_146131535_146132094_146132178_146132883_146133051_146133402_146133823
ES.25022.119	chr4	+	3943	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-1750	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	221.107439947189	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146096728	146135327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146096839_146126784_146126867_146129876_146130004_146131535_146133847_146134014
ES.25022.12	chr4	+	8532	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-75	-5659	-28	5659	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTCTGTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	146033839	146068850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ES.25022.120	chr4	+	4304	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-1746	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.035711144616	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146096732	146135327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146096839_146101991_146102186_146126781_146126867_146129876_146130004_146131535
ES.25022.121	chr4	+	5537	1	Antisense	novelGene_ENSMUSG00000086654.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	1422	False	NA	NA	False	NA	NA	NA	146103123	146108660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_146103100_146108700
ES.25022.122	chr4	+	13375	3	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	23248	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146121726	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146124514_146124562_146132682_146132850
ES.25022.123	chr4	+	9214	2	NIC	ENSMUSG00000066007.16	novel	4154	5	NA	NA	26100	-1	intron_retention	FALSE	canonical	3	118	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146124578	146135324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146130004_146131535
ES.25022.124	chr4	+	4900	3	ISM	ENSMUSG00000066007.16	ENSMUST00000131932.2	569	5	27410	-3591	27410	5	3prime_fragment	FALSE	canonical	3	118	junction_2	210.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTTTCAGTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	146125888	146135330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_146126867_146129876_146130004_146131535
ES.25022.125	chr4	+	5950	3	NNC	ENSMUSG00000066007.16	novel	4154	5	NA	NA	29196	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146127674	146135324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146130004_146131535_146133824_146133991
ES.25022.126	chr4	+	4961	1	Genic_Genomic	ENSMUSG00000066007.16	novel	NA	NA	NA	NA	31887	1	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146130365	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146130400_146135300
ES.25022.127	chr4	+	3436	4	NNC	ENSMUSG00000066007.16	novel	4154	5	NA	NA	32738	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146131216	146135327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146132071_146132154_146132766_146132934_146133402_146133823
ES.25022.129	chr4	+	2712	2	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	33702	-259	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAATGAAGAAATTGACA	NA	False	NA	NA	False	AATAAA	-25	NA	146132180	146135060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146133459_146133626
ES.25022.13	chr4	+	3033	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.2663752908187	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146033843	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146041696_146041784_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.130	chr4	+	4366	1	Genic_Genomic	ENSMUSG00000084127.2	novel	NA	NA	NA	NA	-599	2087	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCGTCAAGTTGACATAG	NA	False	NA	NA	False	NA	NA	NA	146175924	146180290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146175900_146180300
ES.25022.131	chr4	+	2172	2	NNC	ENSMUSG00000084127.2	novel	1459	2	NA	NA	-550	15	intron_retention	FALSE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGGTAGTTTTGTAC	NA	False	NA	NA	False	AATAAA	-15	NA	146175973	146178218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146176003_146176075
ES.25022.132	chr4	+	2233	1	Genic_Genomic	ENSMUSG00000084127.2	novel	NA	NA	NA	NA	-536	17	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGTAGTTTTGTACAC	NA	False	NA	NA	False	AATAAA	-17	NA	146175987	146178220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146176000_146178200
ES.25022.133	chr4	+	849	1	Genic_Genomic	ENSMUSG00000084127.2	novel	NA	NA	NA	NA	-173	-1004	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	146176350	146177199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146176400_146177200
ES.25022.134	chr4	+	290	1	NIC	ENSMUSG00000084127.2	novel	1459	2	NA	NA	518	-872	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAGTGAAGATCCACGG	NA	False	NA	NA	False	NA	NA	NA	146177041	146177331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146177000_146177300
ES.25022.135	chr4	+	160	1	Intergenic	novelGene_20668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	146185977	146186137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146186000_146186100
ES.25022.136	chr4	+	4186	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-7070	41574	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.2250933299282	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146199830	146256578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.137	chr4	+	4220	7	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-7008	41588	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	83.0020080078388	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146199892	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.138	chr4	+	5623	7	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6997	43002	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	83.0020080078388	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146199903	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.139	chr4	+	3284	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6981	40725	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	92.7844814610719	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146199919	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.14	chr4	+	3558	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-19	821	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146033848	146064012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146034017_146054375_146054480_146060726
ES.25022.140	chr4	+	5345	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6801	43002	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.2250933299282	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146200099	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.141	chr4	+	3078	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6787	40726	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	51.6	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGGAATCTTAATATTTT	NA	False	NA	NA	False	AATAAA	-26	NA	146200113	146255730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.142	chr4	+	738	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6784	38389	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	51.6	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146200116	146253393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.143	chr4	+	3927	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6779	41583	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	51.6	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAATTATGTCCATCCG	NA	False	NA	NA	False	NA	NA	NA	146200121	146256587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.144	chr4	+	4013	7	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6776	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	84.1039370197509	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146200124	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.145	chr4	+	3919	6	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6753	41588	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	92.7844814610719	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146200147	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.146	chr4	+	419	4	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6732	25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	116.287956766335	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGAGTTCTTCTCTGG	NA	False	NA	2	True	NA	NA	NA	146200168	146214973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146207051_146207223_146209452_146209546_146214922
ES.25022.147	chr4	+	773	7	Fusion	ENSMUSG00000070605.5_ENSMUSG00000085525.8	novel	4550	4	NA	NA	-6731	-4075	multi-exon	FALSE	canonical	3	35	junction_5	252.774603154668	2690	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGTAAACAGTTTAACT	NA	False	NA	NA	False	AATACA	-4	NA	146200169	146550674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146200273_146209452_146209546_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.148	chr4	+	3817	5	NNC	ENSMUSG00000085525.8	novel	280	2	NA	NA	-6729	41592	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	54.7973539507155	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146200171	146256596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146200273_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.149	chr4	+	676	6	Fusion	ENSMUSG00000070605.5_ENSMUSG00000085525.8	novel	4550	4	NA	NA	-6727	-4082	multi-exon	FALSE	canonical	3	35	junction_4	271.011881658351	2690	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGACTCTGTAAACAG	NA	False	NA	NA	False	AAAAAG	-35	NA	146200173	146550667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146200273_146209452_146209546_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.15	chr4	+	8390	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-18	5654	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCGGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	146033849	146068845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146034017_146054375_146054480_146060726
ES.25022.150	chr4	+	3005	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-55	40722	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.2565782966318	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-22	NA	146206845	146255726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.151	chr4	+	4205	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-41	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	98.9316542984207	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206859	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.152	chr4	+	5446	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-41	43002	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	153.60302369709	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146206859	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.153	chr4	+	3027	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-30	40722	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-22	NA	146206870	146255726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.154	chr4	+	2838	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-28	40407	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	153.60302369709	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	146206872	146255411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.155	chr4	+	5387	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-28	43002	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146206872	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.156	chr4	+	3941	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-28	41592	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146206872	146256596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.157	chr4	+	2054	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-28	41592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	153.781952416039	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146206872	146256596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158_146253508_146255417
ES.25022.159	chr4	+	3963	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-27	41592	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	160.36159141141	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146206873	146256596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.16	chr4	+	4855	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-17	1913	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.6131270582936	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-32	NA	146033850	146065104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.161	chr4	+	292	3	FSM	ENSMUSG00000085525.8	ENSMUST00000144166.8	326	3	-23	57	-23	-1	multi-exon	FALSE	canonical	3	253	junction_2	93	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAGAA	NA	False	NA	19	True	NA	NA	NA	146206877	146214947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146207052_146209452_146209546_146214922
ES.25022.162	chr4	+	3155	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-16	40725	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	158.120910135953	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146206884	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146225375_146225469_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.163	chr4	+	3868	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-16	41590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.045464699329	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206884	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146250678_146250741_146251596_146251707_146253158
ES.25022.164	chr4	+	777	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-15	38405	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTTTTCTACCAT	NA	False	NA	NA	False	AATACA	-18	NA	146206885	146253409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.165	chr4	+	3231	4	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-15	172327	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_3	28.9942523039768	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGATATATGTTGCTTAAA	NA	False	NA	NA	False	AATAAA	-18	NA	146206885	146387331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146206973_146209452_146209546_146240246_146240293_146384326
ES.25022.166	chr4	+	4070	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-15	41579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.310875600299	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATGCAATTATGTCCA	NA	False	NA	NA	False	NA	NA	NA	146206885	146256583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146221283_146221349_146240156_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.167	chr4	+	4006	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-5	41588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	155.040854830805	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206895	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250741_146251596_146251707_146253158
ES.25022.168	chr4	+	3993	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	0	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	153.60302369709	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206900	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.169	chr4	+	4034	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	0	41588	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	94.4996693115907	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206900	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.170	chr4	+	1655	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	2	172330	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	31.0805405358401	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATGTTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	146206902	146387334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146206973_146209452_146209546_146240246_146240293_146373510_146373562_146384326_146384431_146386043
ES.25022.171	chr4	+	5474	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	4	42986	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	84.2368090563739	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAACAAATGTA	NA	False	NA	NA	False	NA	NA	NA	146206904	146257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.172	chr4	+	3981	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	6	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	52.3696795229199	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206906	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146207190_146207267_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.173	chr4	+	3858	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	6	41589	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	146206906	146256593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.174	chr4	+	4073	8	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	12	41588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	145.361056458372	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206912	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146210015_146210123_146214922_146215005_146240246_146240293_146250678_146250741_146251596_146251707_146253158
ES.25022.175	chr4	+	5303	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	12	42994	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAATGTAAACGCAAA	NA	False	NA	NA	False	NA	NA	NA	146206912	146257998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.176	chr4	+	2909	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	12	40406	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	85.3955502353606	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTAATTCAAATGAGC	NA	False	NA	NA	False	AATAAA	-16	NA	146206912	146255410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.177	chr4	+	3034	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	12	40725	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146206912	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.179	chr4	+	5520	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	43382	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	153.781952416039	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGAGGATTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	146206913	146258386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158_146257815_146258007
ES.25022.18	chr4	+	5663	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-59	-2806	-12	2806	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAACCTGGACACAGCC	NA	False	NA	NA	False	NA	NA	NA	146033855	146065997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ES.25022.180	chr4	+	3885	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	159.875451523991	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206913	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250741_146251596_146251707_146253158
ES.25022.181	chr4	+	4134	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41588	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	53.3516635167077	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206913	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.182	chr4	+	2826	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	40518	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCTTCGAGTATTCA	NA	False	NA	NA	False	TATAAA	-17	NA	146206913	146255522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.183	chr4	+	4155	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.3205101100449	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGCAATTATGTCCATC	NA	False	NA	NA	False	NA	NA	NA	146206913	146256585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146208866_146209085_146209452_146209546_146210015_146210123_146250678_146250741_146251596_146251707_146253158
ES.25022.184	chr4	+	3065	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	13	40721	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTACGGAATCTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	146206913	146255725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.185	chr4	+	6117	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	43640	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	56.9912273951	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTATTGCTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	146206913	146258644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.186	chr4	+	1267	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	37292	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	57.6281181368956	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGAGATATTTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	146206913	146252296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146240246_146240293_146250678_146250737_146251579
ES.25022.188	chr4	+	5270	5	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	43008	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	177.47957628978	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAAGAATCATCTATATA	NA	False	NA	NA	False	NA	NA	NA	146206913	146258012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146250678_146250737_146251579_146251707_146253158
ES.25022.189	chr4	+	3824	7	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	41588	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	153.109710120989	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206913	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158_146254619_146254690
ES.25022.19	chr4	+	2924	5	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	83.7059585692679	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAATTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	146033860	146063186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146034017_146036319_146036397_146054375_146054480_146058453_146058581_146060726
ES.25022.190	chr4	+	3034	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	13	40519	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	109.482418679896	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCTTCGAGTATTCAG	NA	False	NA	NA	False	TATAAA	-18	NA	146206913	146255523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.191	chr4	+	5952	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	13	43644	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGCTATTTTATAATA	NA	False	NA	NA	False	NA	NA	NA	146206913	146258648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.192	chr4	+	4937	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	14	42436	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	85.3955502353606	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGGATGCCAGTGCCT	NA	False	NA	NA	False	NA	NA	NA	146206914	146257440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.193	chr4	+	3999	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	14	41587	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	154.576572179185	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCCATCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	146206914	146256591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.194	chr4	+	3927	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	14	41584	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	NA	False	NA	NA	False	NA	NA	NA	146206914	146256588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.195	chr4	+	3104	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-17	40556	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	93.372372787672	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGTTCACATTAT	NA	False	NA	NA	False	NA	NA	NA	146206924	146255560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.196	chr4	+	3894	8	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-17	41587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	151.186464138743	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCCATCCGCTAC	NA	False	NA	NA	False	NA	NA	NA	146206924	146256591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158_146254619_146254690
ES.25022.197	chr4	+	5385	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-16	42984	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	154.576572179185	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATCAACAAATG	NA	False	NA	NA	False	NA	NA	NA	146206925	146257988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.199	chr4	+	5848	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-13	43384	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	84.2368090563739	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGGATTGTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	146206928	146258388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.2	chr4	+	3024	6	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.4314799056394	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033819	146063191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146033897_146035050_146035222_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.20	chr4	+	4764	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	-53	-1913	-6	1913	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-32	NA	146033861	146065104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ES.25022.200	chr4	+	5672	8	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-13	42994	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	89.1739872384318	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAATGTAAACGCAAA	NA	False	NA	NA	False	NA	NA	NA	146206928	146257998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146214922_146215005_146218468_146218557_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.201	chr4	+	3036	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-12	40721	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	160.36159141141	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTACGGAATCTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	146206929	146255725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.202	chr4	+	4084	6	NNC	ENSMUSG00000085525.8	novel	282	3	NA	NA	-12	41588	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	86.4740423479786	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206929	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214925_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.203	chr4	+	5750	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-12	43376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	153.60302369709	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAAGTTCTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	146206929	146258380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.204	chr4	+	5528	7	NNC	ENSMUSG00000085525.8	novel	282	3	NA	NA	-12	42986	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	77.2278375256545	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAACAAATGTA	NA	False	NA	NA	False	NA	NA	NA	146206929	146257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214925_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.205	chr4	+	5495	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-12	42996	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	109.482418679896	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAATGTAAACGCAAAGA	NA	False	NA	NA	False	NA	NA	NA	146206929	146258000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.206	chr4	+	5670	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-12	43378	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	159.401882046606	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTTCTGAGGATTGT	NA	False	NA	NA	False	NA	NA	NA	146206929	146258382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.208	chr4	+	4076	6	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-12	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	85.3955502353606	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206929	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.209	chr4	+	2644	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-10	40272	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	153.60302369709	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGTTGGGAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	146206931	146255276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.21	chr4	+	3023	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	85.5584595466749	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033863	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146035050_146035222_146054375_146054480_146058453_146058581_146060726
ES.25022.210	chr4	+	4155	7	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-10	41589	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	100.054429631521	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	146206931	146256593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.211	chr4	+	3999	8	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-9	41588	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	145.441060367478	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146206932	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214397_146214438_146214922_146215005_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.212	chr4	+	3792	4	NNC	ENSMUSG00000085525.8	novel	314	3	NA	NA	-9	172685	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_3	88.54753902095	1509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGTATACAAT	NA	False	NA	NA	False	NA	NA	NA	146206932	146387689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146240246_146240293_146384326
ES.25022.213	chr4	+	4456	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	-4	42136	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	167.233489469065	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAACATCCAGATAATGC	NA	False	NA	NA	False	AATAAA	-20	NA	146206937	146257140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207052_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.214	chr4	+	4120	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	1	41590	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	93.372372787672	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146206942	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207267_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.216	chr4	+	2883	6	NNC	ENSMUSG00000085525.8	novel	326	3	NA	NA	11	40407	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	109.482418679896	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	146206952	146255411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146207223_146209452_146209546_146214922_146215005_146250678_146250737_146251579_146251707_146253158
ES.25022.217	chr4	+	2777	5	Intergenic	novelGene_20672	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCTTCGAGTATTCA	NA	False	NA	NA	False	TATAAA	-17	NA	146223532	146255522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.218	chr4	+	5258	5	Intergenic	novelGene_20673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146223535	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.219	chr4	+	3827	5	Intergenic	novelGene_20674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCCGCTACGGCTCC	NA	False	NA	NA	False	NA	NA	NA	146223557	146256597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.22	chr4	+	2930	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.6131270582936	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033865	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.220	chr4	+	5604	5	Intergenic	novelGene_20675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAAGTTCTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	146223563	146258380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.221	chr4	+	2654	5	Intergenic	novelGene_20676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	31.0523751104485	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTAATTCAAATGAGC	NA	False	NA	NA	False	AATAAA	-16	NA	146223566	146255410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.222	chr4	+	3714	5	Intergenic	novelGene_20677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	34.9383385409209	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146223566	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146250678_146250737_146251562_146251707_146253158_146254619_146254690
ES.25022.223	chr4	+	6403	7	Intergenic	novelGene_20678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	30.0758300892187	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTTCCTCTATTCTAT	NA	False	NA	NA	False	NA	NA	NA	146223567	146259260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146225375_146225469_146240246_146240316_146250678_146250737_146251579_146251707_146253158_146257815_146258007
ES.25022.224	chr4	+	3738	6	Intergenic	novelGene_20680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	29.982661656364	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146223569	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158_146254619_146254690
ES.25022.225	chr4	+	5335	7	Intergenic	novelGene_20682	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	29.0100557278564	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTTCTGAGGATTGT	NA	False	NA	NA	False	NA	NA	NA	146223569	146258382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158_146254619_146254690_146257815_146258007
ES.25022.226	chr4	+	5231	5	Intergenic	novelGene_20681	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	31.0523751104485	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAACAAATGTA	NA	False	NA	NA	False	NA	NA	NA	146223569	146257990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.227	chr4	+	6823	5	Intergenic	novelGene_20684	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAATTCTCAG	NA	False	NA	NA	False	NA	NA	NA	146223569	146259605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.228	chr4	+	5435	6	Intergenic	novelGene_20683	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	30.3354578010618	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGAGGATTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	146223569	146258387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240316_146250678_146250737_146251579_146251707_146253158_146257815_146258007
ES.25022.229	chr4	+	2947	5	Intergenic	novelGene_20679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146223569	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.230	chr4	+	3055	6	Intergenic	novelGene_20685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	31.9186465878489	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATCTACGGAATCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	146223572	146255724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146225375_146225469_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.231	chr4	+	2620	5	Intergenic	novelGene_20686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	30.2603288151335	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATATTTAATTCAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	146223575	146255408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.232	chr4	+	5253	5	Intergenic	novelGene_20688	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	33.0633860939862	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAATGTAAACGCAAA	NA	False	NA	NA	False	NA	NA	NA	146223576	146257998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223759_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.233	chr4	+	3831	5	Intergenic	novelGene_20687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	31.0523751104485	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCCGCTACGGCTCC	NA	False	NA	NA	False	NA	NA	NA	146223576	146256597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.234	chr4	+	5147	4	Intergenic	novelGene_20689	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	36.5908306668336	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAATGTAAACGCAAA	NA	False	NA	NA	False	NA	NA	NA	146223592	146257998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146250678_146250737_146251579_146251707_146253158
ES.25022.235	chr4	+	2830	4	Intergenic	novelGene_20690	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	37.3838943337309	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146223627	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146223715_146250678_146250741_146251596_146251707_146253158
ES.25022.236	chr4	+	4406	6	Intergenic	novelGene_20691	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	31.7779797973377	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	146223947	146256594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146224594_146225375_146225469_146240246_146240293_146250678_146250737_146251579_146251707_146253158
ES.25022.237	chr4	+	7427	1	Intergenic	novelGene_20692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	693	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGTTAAAATATCAACCA	NA	False	NA	NA	False	NA	NA	NA	146229565	146236992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146229600_146237000
ES.25022.238	chr4	+	7260	3	Intergenic	novelGene_20693	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	40	777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATTCAAATGAGCCAA	NA	False	NA	NA	False	AATAAA	-19	NA	146245858	146255413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146250737_146251579_146251707_146253158
ES.25022.239	chr4	+	4942	2	Intergenic	novelGene_20694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	83	junction_1	0	778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACGGAATCTTAATATTT	NA	False	NA	NA	False	AATAAA	-25	NA	146249335	146255729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146251707_146253158
ES.25022.24	chr4	+	2935	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.8322853723112	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033867	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146041696_146041784_146054375_146054480_146058453_146058581_146060726
ES.25022.240	chr4	+	6674	3	Intergenic	novelGene_20695	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	40	787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTTCTGAGGATTGT	NA	False	NA	NA	False	NA	NA	NA	146249413	146258382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146250737_146251579_146251707_146253158
ES.25022.241	chr4	+	2828	3	Intergenic	novelGene_20696	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	40	778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCTTCGAGTATTCA	NA	False	NA	NA	False	TATAAA	-17	NA	146250399	146255522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146250737_146251579_146251707_146253158
ES.25022.243	chr4	+	2305	2	Intergenic	novelGene_20698	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	2145	False	NA	NA	False	NA	NA	NA	146254189	146256578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146254198_146254281
ES.25022.244	chr4	+	5699	2	Intergenic	novelGene_20699	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAAGTCTGTCTTTGCTT	2150	False	NA	NA	False	NA	NA	NA	146254194	146259977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146254203_146254286
ES.25022.245	chr4	+	4197	2	Intergenic	novelGene_20700	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGGCTGGAAATATG	NA	False	NA	NA	False	AATAAA	-19	NA	146262216	146272603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146263967_146270156
ES.25022.246	chr4	+	3383	1	Intergenic	novelGene_20701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTATATCAAG	131	False	NA	NA	False	AATAAA	-13	NA	146270663	146274046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146270700_146274000
ES.25022.247	chr4	+	6359	3	Intergenic	novelGene_20703	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	146281131	146434252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146281139_146289382_146289548_146428065
ES.25022.248	chr4	+	2172	4	Intergenic	novelGene_20704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	282.733089680002	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	2262	False	NA	NA	False	NA	NA	NA	146289320	146319731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146312866_146312976_146317966
ES.25022.249	chr4	+	1747	4	Intergenic	novelGene_20705	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	9.89949493661167	1132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTTGCTTAAATTTG	2266	False	NA	NA	False	AATAAA	-22	NA	146289324	146387335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146368115_146368256_146384316_146384431_146386043
ES.25022.25	chr4	+	2982	7	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.4295378607759	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033867	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146035050_146035222_146036265_146036397_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.251	chr4	+	1480	3	Intergenic	novelGene_20706	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGTAGCCACTTTTC	2280	False	NA	NA	False	NA	NA	NA	146289338	146296875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.252	chr4	+	7377	3	Intergenic	novelGene_20708	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGAAGTGTTGTGTA	2283	False	NA	NA	False	AATAAA	-25	NA	146289341	146302775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.253	chr4	+	930	1	Intergenic	novelGene_20707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACCCTGAAAAGAAAAT	2283	False	NA	NA	False	NA	NA	NA	146289341	146290271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289300_146290300
ES.25022.254	chr4	+	2091	4	Intergenic	novelGene_20711	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_2	238.174072663019	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTTGTTTTCAATT	2293	False	NA	NA	False	NA	NA	NA	146289351	146319732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146312913_146312972_146317966
ES.25022.255	chr4	+	7675	2	Intergenic	novelGene_20712	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATGAAAAAAAAA	2293	False	NA	NA	False	AATGAA	-28	NA	146289351	146434222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289519_146426714
ES.25022.256	chr4	+	4410	3	Intergenic	novelGene_20709	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTTTGTATGTGTAT	2293	False	NA	NA	False	CATAAA	-20	NA	146289351	146299818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.257	chr4	+	4940	3	Intergenic	novelGene_20710	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCCTTCTCACCGCTC	2293	False	NA	NA	False	AATAAA	-28	NA	146289351	146300348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.258	chr4	+	3022	6	Intergenic	novelGene_20713	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	48.2062236645851	1166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	2294	False	NA	NA	False	NA	NA	NA	146289352	146393556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146368115_146368209_146384326_146384431_146388423_146388614_146390758_146391379_146391714
ES.25022.259	chr4	+	2199	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-244125	-2053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9742549587184	2334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	2296	False	NA	NA	False	AATAAA	-23	NA	146289354	146552696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146289526_146384374_146384431_146388486_146388614_146550437_146550587_146551000
ES.25022.26	chr4	+	2895	5	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5949623246064	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146033897_146035050_146035222_146054375_146054480_146058453_146058581_146060726
ES.25022.260	chr4	+	889	6	Intergenic	novelGene_20714	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	233.229157696888	1146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTTCTACCATTA	2304	False	NA	NA	False	AATACA	-20	NA	146289362	146391011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146293423_146293573_146384326_146384431_146388486_146388614_146390758
ES.25022.261	chr4	+	3046	7	Intergenic	novelGene_20720	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_6	217.780024081386	1166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	2312	False	NA	NA	False	NA	NA	NA	146289370	146393558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146312866_146312972_146384326_146384431_146388486_146388614_146390758_146391393_146391730
ES.25022.262	chr4	+	2986	3	Intergenic	novelGene_20715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCCAGTGCCATGTCT	2312	False	NA	NA	False	TATAAA	-17	NA	146289370	146298413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.263	chr4	+	1128	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297113	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.746988765039	3038	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	2312	False	NA	NA	False	NA	NA	NA	146289370	146627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146289526_146597241_146597335_146603539_146603615_146616526_146616611_146619877_146620005_146621233_146621333_146626770
ES.25022.264	chr4	+	4674	3	Intergenic	novelGene_20717	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTGTATGTGTATA	2312	False	NA	NA	False	NA	NA	NA	146289370	146300101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.265	chr4	+	2198	5	Intergenic	novelGene_20718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	239.358909380871	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	2312	False	NA	NA	False	NA	NA	NA	146289370	146319724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675_146295763_146312866_146312972_146317966
ES.25022.266	chr4	+	4289	3	Intergenic	novelGene_20716	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCATGGTCATGACATT	2312	False	NA	NA	False	CATAAA	-19	NA	146289370	146299716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.267	chr4	+	4221	9	Intergenic	novelGene_20721	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_6	147.764117345856	3668	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTCTCATAAAGTAT	2312	False	NA	NA	False	AATAAA	-18	NA	146289370	146806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146802611_146802693_146803281_146803449_146803953_146804037
ES.25022.268	chr4	+	3868	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297113	182151	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	149.782888142294	3667	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	2312	False	NA	NA	False	AATAAA	-14	NA	146289370	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146289526_146597241_146597335_146603534_146603615_146613823_146613960_146616529_146616611_146800390_146800518_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.269	chr4	+	511	5	Intergenic	novelGene_20719	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_4	239.773200128788	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	2312	False	NA	NA	False	NA	NA	NA	146289370	146319724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146312913_146312972_146317966_146318083_146319635
ES.25022.27	chr4	+	2804	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.3373223065525	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146036265_146036397_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.270	chr4	+	3483	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297113	182151	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	141.954603218776	3667	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	2312	False	NA	NA	False	AATAAA	-14	NA	146289370	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146289526_146597241_146597335_146616529_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803680_146803931_146804170_146804673
ES.25022.271	chr4	+	6027	3	Intergenic	novelGene_20722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATATTTCTGTATCAGT	2313	False	NA	NA	False	NA	NA	NA	146289371	146301455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.272	chr4	+	1305	3	Intergenic	novelGene_20723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCTCATGAAAATTTTA	2318	False	NA	NA	False	NA	NA	NA	146289376	146296738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.273	chr4	+	3639	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-297101	182157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	137.18231538475	3667	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	2324	False	NA	NA	False	AATAAA	-20	NA	146289382	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146289526_146597241_146597335_146603539_146603615_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.274	chr4	+	556	5	Intergenic	novelGene_20724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	49.6109866864186	1144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTAGCAATGTCATT	2337	False	NA	NA	False	NA	NA	NA	146289395	146390860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146368115_146368209_146384326_146384431_146388486_146388614_146390758
ES.25022.275	chr4	+	4781	3	Intergenic	novelGene_20725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_2	262.5	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCATAAAATCGCATATAG	2341	False	NA	NA	False	CATAAA	-20	NA	146289399	146300237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289526_146291416_146291510_146295675
ES.25022.276	chr4	+	4427	6	Intergenic	novelGene_20726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	157.887808269036	3667	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	2375	False	NA	NA	False	AATAAA	-21	NA	146289433	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146289519_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050
ES.25022.277	chr4	+	2845	3	Intergenic	novelGene_20727	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	33	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	3427	False	NA	NA	False	NA	NA	NA	146290485	146319729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146291510_146312913_146312972_146317966
ES.25022.278	chr4	+	919	2	Intergenic	novelGene_20731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_1	0	678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGAGTTTCATTGTGA	4356	False	NA	NA	False	NA	NA	NA	146291414	146296499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146291510_146295675
ES.25022.279	chr4	+	3876	8	Intergenic	novelGene_20732	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_5	157.438164084202	3663	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTATTTCTCATAAAGTA	4382	False	NA	NA	False	AATAAA	-17	NA	146291440	146806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146291510_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.28	chr4	+	1544	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	1	-1162	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_2	78.5	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATGTTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	146033868	146057385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146056093
ES.25022.280	chr4	+	6217	3	Intergenic	novelGene_20733	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATGAAAAAAAAA	4424	False	NA	NA	False	AATGAA	-28	NA	146291482	146434222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146291631_146368327_146369371_146429196
ES.25022.281	chr4	+	5414	2	Intergenic	novelGene_20734	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	5361	False	NA	NA	False	NA	NA	NA	146292419	146434252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146292823_146429241
ES.25022.282	chr4	+	2728	6	Intergenic	novelGene_20737	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_4	47.9608173408252	1160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	6392	False	NA	NA	False	NA	NA	NA	146293450	146393555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146293573_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392589_146392673
ES.25022.283	chr4	+	5771	4	Intergenic	novelGene_20738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	71.6534871602368	678	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACAAGTTTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	146307480	146319720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146308563_146308795_146309773_146311013_146312972_146317966
ES.25022.284	chr4	+	4052	1	Intergenic	novelGene_20740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	676	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146315672	146319724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146315700_146319700
ES.25022.285	chr4	+	3935	2	Intergenic	novelGene_20741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCCGGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	146325808	146331781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146328729_146330766
ES.25022.286	chr4	+	2088	3	Intergenic	novelGene_20742	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	146327188	146331785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146328160_146328607_146328729_146330789
ES.25022.287	chr4	+	3168	1	Intergenic	novelGene_20743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTTGTCCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	146328621	146331789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146328600_146331800
ES.25022.288	chr4	+	2908	7	Intergenic	novelGene_20744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	45.8354544963709	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146365087	146393555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146368077_146368209_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392589_146392673
ES.25022.289	chr4	+	3116	8	Intergenic	novelGene_20745	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	157.644912278662	3413	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146365090	146804873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803953_146804037
ES.25022.29	chr4	+	2826	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	81.1760774831819	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146058471_146058581_146060726
ES.25022.290	chr4	+	3069	3	Intergenic	novelGene_20746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	23.5	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146365091	146393556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146384326_146384431_146390758
ES.25022.291	chr4	+	2928	7	Intergenic	novelGene_20747	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	45.8354544963709	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146365108	146393556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146366540_146366712_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392589_146392673
ES.25022.292	chr4	+	4159	7	Intergenic	novelGene_20748	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	170.268415548314	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146365109	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.293	chr4	+	6032	5	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-330307	63392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.5446323172289	3426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146365110	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146365259_146370075_146370163_146697966_146698060_146797295_146797381_146800390
ES.25022.294	chr4	+	2760	6	Intergenic	novelGene_20749	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	46.9084214187602	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146365110	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146384326_146384431_146388486_146388614_146390758_146391620_146391956_146392589_146392673
ES.25022.295	chr4	+	4317	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-221373	182161	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	158.012459951739	3426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTTTCAGTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	146365110	146806013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146365259_146370084_146370163_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.296	chr4	+	3135	7	Intergenic	novelGene_20750	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	160.063181969565	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146365111	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146804540_146805885
ES.25022.297	chr4	+	7329	5	Intergenic	novelGene_20755	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	196.372732322998	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146365121	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365260_146428065_146428160_146797295_146800518_146802050_146803962_146804045
ES.25022.298	chr4	+	4215	8	Intergenic	novelGene_20752	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	157.644912278662	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146365121	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.299	chr4	+	7230	7	Intergenic	novelGene_20754	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	165.403546918841	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146365121	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146800518_146802050_146803197_146803365_146803953_146804037
ES.25022.3	chr4	+	3026	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-47	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	84.3474955170573	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033820	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146036265_146036397_146054375_146054480_146058453_146058581_146060726
ES.25022.30	chr4	+	2996	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.0579272079396	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033868	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146041696_146041784_146043550_146043631_146054375_146054480_146058471_146058581_146060726
ES.25022.300	chr4	+	5994	5	Intergenic	novelGene_20756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	66.4981202741852	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146365121	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797295_146797381_146800408
ES.25022.301	chr4	+	4315	6	Intergenic	novelGene_20753	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	179.332763320036	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146365121	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146803869_146803953
ES.25022.302	chr4	+	1827	5	Intergenic	novelGene_20751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	176.085916529403	3297	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATGCAGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	146365121	146803437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146797298_146797381_146800390_146800518_146802050
ES.25022.303	chr4	+	4178	8	Intergenic	novelGene_20759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	158.069604921376	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146365140	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800408_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.304	chr4	+	3893	8	Intergenic	novelGene_20757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	157.644912278662	3423	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAAAATGTCTAATAAA	NA	False	NA	NA	False	AATAAA	-14	NA	146365140	146805699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.305	chr4	+	4205	8	Intergenic	novelGene_20758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	155.13627978691	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACAAGGTTGACTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	146365140	146805998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800377_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.306	chr4	+	4117	7	Intergenic	novelGene_20760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	170.268415548314	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146365142	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803953_146804037
ES.25022.307	chr4	+	4117	8	Intergenic	novelGene_20761	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	157.644912278662	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146365219	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146365259_146428065_146428160_146435241_146435318_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803848_146803931
ES.25022.308	chr4	+	2855	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-168253	-1720	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	301.546430919021	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	17	True	AATAAA	-25	NA	146365226	146553029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146365259_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.309	chr4	+	3834	13	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-221242	182152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.229571580678	3426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	146365241	146806004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146365259_146502756_146502850_146508052_146508145_146597241_146597335_146603534_146603615_146613823_146613960_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.31	chr4	+	4085	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	1913	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	82.8322853723112	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-32	NA	146033868	146065104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726_146061783_146062454
ES.25022.310	chr4	+	3096	3	Intergenic	novelGene_20762	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	3.5	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146369973	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146384326_146384431_146390758
ES.25022.311	chr4	+	4512	5	Intergenic	novelGene_20763	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	181.743638127996	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCTGAAGTCATGAAT	NA	False	NA	NA	False	AATAAA	-35	NA	146369994	146806088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800390_146800518_146802050
ES.25022.312	chr4	+	1563	3	Intergenic	novelGene_20764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	9.5	889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTTGCTTAAATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	146369995	146387335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146384326_146384431_146386043
ES.25022.313	chr4	+	3478	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-216479	182152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.911468551086	3425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	146370004	146806004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146370163_146616529_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.314	chr4	+	2016	5	Intergenic	novelGene_20765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	181.743638127996	3324	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAATGCAGTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	146370007	146803605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800390_146800518_146802050
ES.25022.315	chr4	+	7232	3	Intergenic	novelGene_20766	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	40.5	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146370014	146393555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146384326_146388614_146390758
ES.25022.316	chr4	+	3176	4	Intergenic	novelGene_20767	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	34.5864456430872	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146370014	146393555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146384326_146384431_146388486_146388614_146390758
ES.25022.317	chr4	+	4212	7	Intergenic	novelGene_20768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	169.646118598557	3425	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTGGAACTATTTCTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	146370014	146806064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.318	chr4	+	4155	7	Intergenic	novelGene_20769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	169.646118598557	3425	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146370017	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803869_146803953
ES.25022.319	chr4	+	462	3	Intergenic	novelGene_20770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	9.5	889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTATAAATGATCTGGA	NA	False	NA	NA	False	AATAAA	-10	NA	146370024	146386263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146384326_146384431_146386043
ES.25022.32	chr4	+	3803	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.9279290633338	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAATTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146056093_146057226_146058453_146058581_146060726_146061347_146061514
ES.25022.320	chr4	+	2580	6	Intergenic	novelGene_20771	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	43.2601433192263	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370024	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146375377_146375458_146384326_146384431_146388486_146388614_146390758_146391379_146392050
ES.25022.321	chr4	+	5927	4	Intergenic	novelGene_20772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	88.0946460726568	3425	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146370030	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800390
ES.25022.322	chr4	+	4123	7	Intergenic	novelGene_20773	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	170.093764991222	3425	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146370030	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800408_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.323	chr4	+	3244	5	Intergenic	novelGene_20774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	40.3887360535088	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370032	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146375377_146375458_146384326_146384431_146388486_146388614_146390758
ES.25022.324	chr4	+	4308	6	Intergenic	novelGene_20775	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	178.524620150835	3425	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146370036	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146803953_146804037
ES.25022.325	chr4	+	4210	7	Intergenic	novelGene_20776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	167.002411825565	3426	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTCTCATAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	146370036	146806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146370163_146428065_146428160_146797298_146797381_146800377_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.326	chr4	+	2047	2	Intergenic	novelGene_20777	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	146372394	146434252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146372594_146432404
ES.25022.327	chr4	+	3072	2	Intergenic	novelGene_20778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTTGCTTAAATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	146375394	146387335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146375458_146384326
ES.25022.328	chr4	+	5621	4	Intergenic	novelGene_20779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	49.4031038161234	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	146381608	146393558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146383393_146383520_146384431_146388486_146388614_146390758
ES.25022.329	chr4	+	7225	4	Intergenic	novelGene_20780	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146385626	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146388207_146388411_146391620_146391956_146392219_146392386
ES.25022.33	chr4	+	2750	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	80.9187246562871	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146036319_146036397_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.330	chr4	+	3612	1	Intergenic	novelGene_20782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	910	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTAAAAAAAATGCTG	NA	False	NA	NA	False	NA	NA	NA	146390777	146394389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146390800_146394400
ES.25022.331	chr4	+	4129	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159973	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426510	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802661_146802742_146803303_146803469_146803953_146804037
ES.25022.332	chr4	+	3700	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159972	182150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	158.229609665827	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426511	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802588_146803007_146804043_146804377_146804540_146804624
ES.25022.333	chr4	+	4127	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159972	182156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426511	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802590_146802671_146803320_146803488_146803953_146804037
ES.25022.334	chr4	+	3704	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159971	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.939320939055	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426512	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.335	chr4	+	3627	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159970	182155	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	175.200837136508	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426513	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804243_146804657
ES.25022.336	chr4	+	3703	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159966	182155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.939320939055	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426517	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804243_146804657
ES.25022.337	chr4	+	3628	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159966	182153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169.465253731325	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426517	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800377_146800518_146802050_146802609_146803029_146804185_146804602
ES.25022.338	chr4	+	3698	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159964	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	158.229609665827	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426519	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802587_146803007_146804043_146804377_146804573_146804657
ES.25022.339	chr4	+	4124	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159959	182153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.713079360552	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426524	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.34	chr4	+	5194	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	80.5744376337806	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033868	146063191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146043550_146043631_146054375_146054480_146056093_146057906_146057995_146058581_146060726
ES.25022.340	chr4	+	4516	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159959	182219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.146107546521	3218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTCTCATAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	146426524	146806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050
ES.25022.341	chr4	+	6377	2	Intergenic	novelGene_20783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	1131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	146426524	146434252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065
ES.25022.342	chr4	+	8229	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159958	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.8	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426525	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146802609_146803029_146804243_146804657
ES.25022.343	chr4	+	3612	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159958	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426525	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804006_146804339_146804553_146804636
ES.25022.344	chr4	+	6626	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159958	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.303642705695	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426525	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.345	chr4	+	4116	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159958	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426525	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803350_146803516_146803953_146804037
ES.25022.346	chr4	+	4113	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159956	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426527	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802674_146802755_146803281_146803449_146803953_146804037
ES.25022.347	chr4	+	4105	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159955	182154	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146426528	146806006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803398_146803566_146803953_146804037
ES.25022.348	chr4	+	4109	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159952	182158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426531	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.349	chr4	+	4106	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159947	182160	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146426536	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802606_146802690_146803294_146803459_146803953_146804037
ES.25022.35	chr4	+	2890	7	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.0805494196776	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033868	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146036265_146036397_146043550_146043631_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.350	chr4	+	3694	8	Intergenic	novelGene_20784	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_6	154.809428600694	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426537	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146435241_146435318_146797295_146797381_146800377_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.351	chr4	+	4445	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159942	182155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.419301266791	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426541	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800377_146800518_146802050
ES.25022.352	chr4	+	7103	7	Intergenic	novelGene_20786	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_4	170.09482649393	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426543	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146800518_146802050_146802609_146802693_146803365_146803533_146803953_146804037
ES.25022.353	chr4	+	4102	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159940	182157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426543	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803959_146804037
ES.25022.354	chr4	+	4076	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159940	182158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.961572665889	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426543	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800408_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.355	chr4	+	4105	8	Intergenic	novelGene_20785	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	159.452379174755	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAAGGTTGACTTGGCT	NA	False	NA	NA	False	AATAAA	-11	NA	146426543	146806000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426716_146428065_146428160_146797295_146797381_146800377_146800518_146802050_146802588_146802671_146803290_146803456_146803953_146804037
ES.25022.356	chr4	+	4163	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159940	182148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAAGGTTGACTTGGCT	NA	False	NA	NA	False	AATAAA	-11	NA	146426543	146806000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.357	chr4	+	4094	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159940	182158	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426543	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802587_146802671_146803281_146803449_146803953_146804037
ES.25022.358	chr4	+	3424	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159936	181905	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.939320939055	3215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACACAGATTGTACTTGA	NA	False	NA	NA	False	AATAAA	-39	NA	146426547	146805757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.359	chr4	+	3593	8	Intergenic	novelGene_20787	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426547	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802588_146803007_146804043_146804377_146804540_146804624
ES.25022.36	chr4	+	6741	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.2761555814333	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146033874	146063189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146057865_146057933_146058581_146060726
ES.25022.360	chr4	+	4098	8	Intergenic	novelGene_20788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	160.493371978346	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426547	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797385_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.362	chr4	+	4094	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159935	182161	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTTTTCAGTTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	146426548	146806013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803334_146803500_146803953_146804037
ES.25022.363	chr4	+	4090	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159935	182156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426548	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803298_146803466_146803959_146804043
ES.25022.364	chr4	+	4092	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159935	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426548	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802674_146802755_146803298_146803466_146803953_146804037
ES.25022.365	chr4	+	3584	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159932	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	175.200837136508	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426551	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804170_146804589
ES.25022.366	chr4	+	3943	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159927	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.35813073151	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426556	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146802958_146803103_146803320_146803488_146803953_146804037
ES.25022.369	chr4	+	3792	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159925	181868	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGCATTTTGTATATT	NA	False	NA	NA	False	AATAAA	-35	NA	146426558	146805720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.37	chr4	+	8872	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	7	-3	intron_retention	TRUE	non_canonical	0	0	junction_2	86	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146033888	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146057913_146057981
ES.25022.370	chr4	+	5607	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159925	182150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6358412177171	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426558	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.372	chr4	+	4400	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159923	182157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.014218244604	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426560	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800408_146800518_146802050
ES.25022.374	chr4	+	4064	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159920	182150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426563	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803310_146803478_146803953_146804042
ES.25022.375	chr4	+	3914	7	Intergenic	novelGene_20789	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	171.638832694961	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426563	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803850_146803931_146804170_146804421
ES.25022.378	chr4	+	3650	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159920	181731	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTATATGATGAAGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	146426563	146805583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.379	chr4	+	4163	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159920	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.292710911663	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426563	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803281_146803449_146803953_146804037
ES.25022.38	chr4	+	4033	7	Fusion	ENSMUSG00000066009.9_ENSMUSG00000066007.16	novel	410	4	NA	NA	8	60	multi-exon	TRUE	non_canonical	0	0	junction_1	196.044212700435	872	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACTATTTCTCATAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	146033889	146135385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146034021_146036301_146036397_146126784_146126867_146129876_146130004_146131535_146132073_146132156_146133612_146133779
ES.25022.381	chr4	+	4075	8	Intergenic	novelGene_20790	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426564	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803346_146803511_146803953_146804037
ES.25022.382	chr4	+	3930	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159918	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.200837136508	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426565	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146803992_146804111_146804871_146805231
ES.25022.383	chr4	+	4412	5	Intergenic	novelGene_20791	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	178.831624720014	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426565	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050
ES.25022.384	chr4	+	4093	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.576575364174	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800363_146800518_146802050_146802609_146802693_146803281_146803449_146803953_146804037
ES.25022.385	chr4	+	4074	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426566	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146803953_146804037
ES.25022.386	chr4	+	4111	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.713079360552	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426744_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802579_146802662_146803290_146803459_146803948_146804029
ES.25022.387	chr4	+	5938	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.6806010326093	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390
ES.25022.388	chr4	+	3968	8	Intergenic	novelGene_20793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	163.51096823973	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146802588_146802671_146803848_146803931_146804170_146804421
ES.25022.389	chr4	+	3568	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.843559942074	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146426566	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.39	chr4	+	5399	7	Fusion	ENSMUSG00000066009.9_ENSMUSG00000085525.8	novel	410	4	NA	NA	13	43002	multi-exon	TRUE	canonical	2	3	junction_5	83.9801563862956	1598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACGCAAAGAATCATC	NA	False	NA	NA	False	NA	NA	NA	146033894	146258006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146034017_146209452_146209546_146214922_146215005_146240246_146240316_146250678_146250737_146251579_146251707_146253158
ES.25022.390	chr4	+	4419	5	Intergenic	novelGene_20795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	182.934926954915	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426566	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797298_146797381_146800377_146800518_146802050
ES.25022.391	chr4	+	4053	8	Intergenic	novelGene_20794	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	160.493371978346	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800408_146800518_146802050_146802588_146802671_146803299_146803464_146803953_146804037
ES.25022.393	chr4	+	3577	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-268851	63393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.617917802495	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426566	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146697966_146698060_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804243_146804657
ES.25022.397	chr4	+	4074	8	Intergenic	novelGene_20797	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426566	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803298_146803466_146803953_146804037
ES.25022.398	chr4	+	2451	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	181021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.465253731325	3204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146426566	146804873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800377_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.399	chr4	+	4080	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.713079360552	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802588_146802671_146803281_146803449_146803953_146804037
ES.25022.4	chr4	+	3068	5	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-46	100	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	83.7059585692679	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATTTTTGCAAACCT	NA	False	NA	NA	False	AATAAA	-16	NA	146033821	146063291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146034017_146036319_146036397_146054375_146054480_146058453_146058581_146060726
ES.25022.40	chr4	+	3459	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-9	820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.8322853723112	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAACCTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	146033905	146064011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.400	chr4	+	1981	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.422677155621	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426566	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802588_146803007_146803869_146805885
ES.25022.401	chr4	+	4056	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.576575364174	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146426566	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800408_146800518_146802050_146802588_146802671_146803320_146803488_146803953_146804037
ES.25022.402	chr4	+	6662	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.063016328941	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426566	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.403	chr4	+	4148	9	Intergenic	novelGene_20796	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_6	152.624078621297	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426566	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803298_146803466_146803959_146804044
ES.25022.404	chr4	+	3555	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.946764448871	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146426566	146806006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800408_146800518_146802050_146802609_146803029_146804243_146804657
ES.25022.405	chr4	+	4104	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426566	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426744_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.406	chr4	+	4068	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182149	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146426566	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803362_146803527_146803953_146804037
ES.25022.408	chr4	+	5315	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	181856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.2506830448126	3214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAATAAAACTGGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	146426566	146805708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426698_146597227_146597335_146797295_146797381_146800377_146802587_146802671_146803281_146803449_146803953_146804037
ES.25022.409	chr4	+	3645	8	Intergenic	novelGene_20792	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_6	155.931696192759	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146426566	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146435241_146435318_146797295_146797381_146800390_146800518_146802050_146802592_146803012_146804243_146804657
ES.25022.41	chr4	+	3160	8	Fusion	ENSMUSG00000085525.8_ENSMUSG00000066009.9	novel	282	3	NA	NA	1	40722	multi-exon	TRUE	non_canonical	0	0	junction_1	148.344056785816	1589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTACGGAATCTTAATA	NA	False	NA	NA	False	AATAAA	-22	NA	146033915	146255726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146033925_146206959_146207052_146209452_146209546_146214925_146215005_146221283_146221388_146250648_146250737_146251579_146251707_146253158
ES.25022.410	chr4	+	3573	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.939320939055	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146426566	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804201_146804686
ES.25022.411	chr4	+	4087	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	182159	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	160.713079360552	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426566	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802589_146802674_146803320_146803488_146803953_146804037
ES.25022.412	chr4	+	5532	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	181022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.063016328941	3204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATGTGACAAATGATTT	NA	False	NA	NA	False	NA	NA	NA	146426566	146804874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.413	chr4	+	6323	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159917	184907	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	3222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAATCTCAAGCAATAT	NA	False	NA	NA	False	TTTAAA	-31	NA	146426566	146808759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802588_146803007_146804043_146804377_146804601_146804684
ES.25022.414	chr4	+	3638	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159916	182149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.939320939055	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146426567	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804170_146804589
ES.25022.415	chr4	+	3563	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159916	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426567	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804043_146804377_146804540_146804624
ES.25022.418	chr4	+	4068	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159915	182156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	166.291359747073	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426568	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802640_146802723_146803320_146803488_146803953_146804037
ES.25022.419	chr4	+	7078	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159911	182158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.946764448871	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426572	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.42	chr4	+	3977	7	Fusion	ENSMUSG00000066009.9_ENSMUSG00000066007.16	novel	410	4	NA	NA	53	1	multi-exon	TRUE	non_canonical	0	0	junction_5	194.104782699105	872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146033967	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146034017_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132073_146132156_146133051_146133135
ES.25022.420	chr4	+	4078	8	Intergenic	novelGene_20798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	158.3519716921	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146426573	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803320_146803488_146803959_146804037
ES.25022.423	chr4	+	3135	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159907	181728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.843559942074	3210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAATATTATATGATGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	146426576	146805580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797298_146797381_146800390_146800518_146802050_146802588_146803007_146804243_146804657
ES.25022.424	chr4	+	4045	8	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-268833	63385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.449592775175	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426584	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146697966_146698060_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803298_146803466_146803953_146804037
ES.25022.425	chr4	+	3544	7	Intergenic	novelGene_20799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	170.683918398893	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426587	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146803029_146804170_146804589
ES.25022.427	chr4	+	4045	8	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-268826	63385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	168.367552257141	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426591	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146697966_146698060_146797295_146797381_146800390_146800518_146802050_146802594_146802676_146803293_146803459_146803953_146804037
ES.25022.428	chr4	+	5405	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159892	181999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.96284793999944	3216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGAGTATCCAGTATTC	NA	False	NA	NA	False	NA	NA	NA	146426591	146805851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146797295_146797381_146800408_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.429	chr4	+	4048	8	Intergenic	novelGene_20800	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426591	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802592_146802676_146803332_146803500_146803953_146804037
ES.25022.43	chr4	+	4421	3	Fusion	ENSMUSG00000066009.9_ENSMUSG00000066007.16	novel	266	2	NA	NA	73	13161	multi-exon	FALSE	non_canonical	0	0	junction_2	1	746	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	146033987	146108658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146034017_146094927_146095022_146104360
ES.25022.430	chr4	+	5162	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159892	182155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.1186619958172	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426591	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146802609_146803029_146804243_146804657
ES.25022.431	chr4	+	3780	4	Intergenic	novelGene_20801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	205.426385841741	2922	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGTTTCTAGACAAAAC	NA	False	NA	108	True	AATAAA	-14	NA	146426592	146802392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146800518_146802050
ES.25022.432	chr4	+	4050	8	Intergenic	novelGene_20805	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426592	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803311_146803479_146803953_146804037
ES.25022.433	chr4	+	4044	8	Intergenic	novelGene_20803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146426592	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802594_146802676_146803320_146803488_146803953_146804037
ES.25022.434	chr4	+	2876	9	Intergenic	novelGene_20802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	150.56975127827	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426592	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803320_146803488_146803869_146803953_146804708_146805885
ES.25022.435	chr4	+	4063	8	Intergenic	novelGene_20806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	158.3519716921	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146426592	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.436	chr4	+	3638	9	Intergenic	novelGene_20804	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_6	149.345185309068	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146426592	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146435241_146435318_146797295_146797381_146800377_146800518_146802050_146802609_146803029_146804003_146804337_146804575_146804657
ES.25022.437	chr4	+	4044	8	Intergenic	novelGene_20807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	163.964655225647	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146426594	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803398_146803566_146803953_146804037
ES.25022.438	chr4	+	4041	8	Intergenic	novelGene_20808	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	162.436800897193	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146426596	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146802589_146802671_146803303_146803469_146803953_146804037
ES.25022.439	chr4	+	4037	8	Intergenic	novelGene_20809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	162.436800897193	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146426599	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426715_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803292_146803460_146803953_146804037
ES.25022.44	chr4	+	2909	6	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	1264	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.4314799056394	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146035178	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146035222_146041696_146041784_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.440	chr4	+	3460	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-159872	182151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.911468551086	3217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146426611	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146426715_146616526_146616611_146619877_146620005_146802015_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.441	chr4	+	3959	8	Intergenic	novelGene_20810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	165.401428812031	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146426951	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146426992_146428065_146428160_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803320_146803488_146803953_146804037
ES.25022.442	chr4	+	3997	8	Intergenic	novelGene_20811	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	163.973741053566	3217	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146427383	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146427461_146428065_146428160_146797298_146797381_146800390_146800518_146802050_146802693_146802773_146803320_146803488_146803953_146804037
ES.25022.443	chr4	+	3457	7	Intergenic	novelGene_20812	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_4	81.1144595960274	3215	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146429830	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146429973_146797298_146797381_146800390_146800514_146802050_146802609_146802693_146803281_146803449_146803869_146804456
ES.25022.444	chr4	+	3473	7	Intergenic	novelGene_20813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	171.638832694961	3215	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146429839	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146429973_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803281_146803449_146803869_146804456
ES.25022.445	chr4	+	3529	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-156643	182150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.133474836543	3215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146429840	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146429973_146435241_146435318_146616526_146616611_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146803869_146804456
ES.25022.446	chr4	+	4057	5	Intergenic	novelGene_20814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	168.025295714663	3212	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAATAAAACTGGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	146429861	146805708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146429973_146435241_146435318_146797295_146797381_146800390_146800518_146802050
ES.25022.447	chr4	+	3018	7	Intergenic	novelGene_20815	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	176.831998109945	3215	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146429865	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146429973_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146803742_146804746
ES.25022.448	chr4	+	8051	7	Intergenic	novelGene_20816	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	174.040624248734	3215	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	2851	False	NA	NA	False	AATAAA	-19	NA	146433950	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146434783_146603074_146603615_146797295_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.449	chr4	+	3224	1	Intergenic	novelGene_20817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATACAAGTCAAATGTC	4049	False	NA	NA	False	CATAAA	-14	NA	146435148	146438372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146435100_146438400
ES.25022.45	chr4	+	2904	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4233	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038147	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
ES.25022.450	chr4	+	6877	6	NNC	ENSMUSG00000063245.12	novel	387	3	NA	NA	-240813	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.8781778291715	2742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146454604	146742061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146458881_146531342_146531351_146726780_146728962_146739355_146739414_146740256_146740384_146741834
ES.25022.451	chr4	+	4249	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40611	-850	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	296.255970403973	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATCCACTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146492868	146553899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.452	chr4	+	1801	2	Intergenic	novelGene_20818	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGGCTCAGAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	146492883	146494897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146493354_146493566
ES.25022.453	chr4	+	4132	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40591	-854	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	313.418550025361	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCCATCCACTACG	NA	False	NA	NA	False	NA	NA	NA	146492888	146553895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.454	chr4	+	4086	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40591	-854	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	370.477469700326	1852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCCATCCACTACG	NA	False	NA	NA	False	NA	NA	NA	146492888	146553895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146547961_146548020_146548860_146548988_146550437
ES.25022.455	chr4	+	1064	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40574	-4081	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	282.234339197452	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	146492905	146550668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146508055_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.456	chr4	+	890	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40574	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	313.418550025361	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146492905	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.457	chr4	+	4108	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40532	-866	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	340.648187284183	1852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCTATGCAATTATGT	NA	False	NA	NA	False	NA	NA	NA	146492947	146553883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.458	chr4	+	2983	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40520	-2048	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	294.401494561424	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGCCAATTGAGAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	146492959	146552701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.459	chr4	+	696	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40463	-4085	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.2825245151302	1829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146493016	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146547961_146548020_146548860_146548970_146550450
ES.25022.46	chr4	+	2775	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4235	3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	19.5	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038149	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146060726
ES.25022.460	chr4	+	3179	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40409	-1718	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	296.255970403973	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGGAATCTTAATATT	NA	False	NA	19	True	AATAAA	-27	NA	146493070	146553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.461	chr4	+	939	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40401	-4085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.532813339007	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146493078	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146506477_146506590_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.463	chr4	+	648	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40315	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	316.700568360715	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146493164	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.464	chr4	+	715	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40308	-4081	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	296.255970403973	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	146493171	146550668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.465	chr4	+	3026	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40308	-1724	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	340.648187284183	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCATCTACGGAATCTT	NA	False	NA	13	True	AATAAA	-21	NA	146493171	146553025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.466	chr4	+	2779	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40307	-2056	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	306.600456620665	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAATGAGCCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	146493172	146552693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.467	chr4	+	5509	2	Intergenic	novelGene_20819	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	1614	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146493175	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146493332_146502756
ES.25022.468	chr4	+	4010	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40304	-868	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.858235832581	1852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146493175	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.469	chr4	+	3155	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40299	-1718	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.858235832581	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGGAATCTTAATATT	NA	False	NA	19	True	AATAAA	-27	NA	146493180	146553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.47	chr4	+	8415	3	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4249	5657	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	19.5	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCGGTCTGTCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	146038163	146068848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146060726
ES.25022.470	chr4	+	4063	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40299	-841	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	286.377033917798	1852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTACGGCTCCTGTTTTAG	NA	False	NA	NA	False	NA	NA	NA	146493180	146553908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.471	chr4	+	4530	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40273	-16889	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	44.9172077889483	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTCTCAAGGTTAGACA	NA	False	NA	NA	False	NA	NA	NA	146493206	146537860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533486_146535754_146535815
ES.25022.472	chr4	+	526	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40262	-4085	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	370.477469700326	1829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146493217	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146547961_146548020_146548860_146548988_146550437
ES.25022.474	chr4	+	2671	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-40247	-2057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.797740469488	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATTCAAATGAGCCAA	NA	False	NA	NA	False	AATAAA	-19	NA	146493232	146552692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146493332_146502756_146502850_146533493_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.475	chr4	+	5553	2	Intergenic	novelGene_20820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	234	junction_1	0	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500172	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500373_146502756
ES.25022.476	chr4	+	3230	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33299	-1723	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	325.843904346851	1848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146500180	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.477	chr4	+	728	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33297	-4085	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	279.646491127638	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500182	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548024_146548877_146548988_146550437
ES.25022.478	chr4	+	1024	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33294	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146500185	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.479	chr4	+	826	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33292	-4081	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.355308018716	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	NA	False	NA	NA	False	AAAAAG	-36	NA	146500187	146550668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.480	chr4	+	5701	3	Intergenic	novelGene_20821	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	75.5	2728	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500191	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500544_146502756_146508057_146703613
ES.25022.481	chr4	+	736	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146500193	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.482	chr4	+	770	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-4068	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	275.60595058888	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTAACTTTGTTTT	NA	False	NA	NA	False	AATACA	-11	NA	146500193	146550681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.483	chr4	+	987	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	259.684049482358	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500193	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.484	chr4	+	4150	8	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-868	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_5	259.139628267804	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146500193	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.485	chr4	+	4076	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-848	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATCCACTACGGCTCCT	NA	False	NA	NA	False	NA	NA	NA	146500193	146553901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.487	chr4	+	4134	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33286	-852	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	NA	False	NA	NA	False	NA	NA	NA	146500193	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.488	chr4	+	7914	1	Intergenic	novelGene_20822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1612	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500195	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500200_146508100
ES.25022.489	chr4	+	2085	3	Intergenic	novelGene_20823	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	38.5	1611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	146500197	146508079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500588_146502756_146502850_146506477
ES.25022.49	chr4	+	2854	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4260	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	87.0517087712815	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146038174	146063189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146058471_146058581_146060726
ES.25022.490	chr4	+	2861	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33282	-2059	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	146500197	146552690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.491	chr4	+	3057	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33282	-2051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	276.404293261399	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATGAGCCAATTGAGA	NA	False	NA	NA	False	AATAAA	-25	NA	146500197	146552698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500584_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.492	chr4	+	5743	2	Intergenic	novelGene_20824	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	79	junction_1	0	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500197	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500588_146502756
ES.25022.493	chr4	+	845	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33275	-4068	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTTTAACTTTGTTTT	NA	False	NA	NA	False	AATACA	-11	NA	146500204	146550681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.494	chr4	+	781	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33263	-4085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	300.481347174829	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500216	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547914_146548020_146548833_146548988_146550437
ES.25022.495	chr4	+	3865	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33263	-858	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.0579755982	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATTATGTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	146500216	146553891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500374_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.496	chr4	+	2787	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33263	-2053	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	278.838513600017	1848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	146500216	146552696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.497	chr4	+	3890	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33262	-855	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	321.524785203256	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTATGTCCATCCACTAC	NA	False	NA	NA	False	NA	NA	NA	146500217	146553894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.498	chr4	+	902	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33258	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	279.837810168676	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146500221	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.499	chr4	+	923	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33254	-4075	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	287.112800132631	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGTAAACAGTTTAACT	NA	False	NA	NA	False	AATACA	-4	NA	146500225	146550674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.50	chr4	+	7363	5	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55219	3	intron_retention	FALSE	canonical	3	10	junction_1	50.9086191130736	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146038174	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126781_146130004_146131535
ES.25022.500	chr4	+	3932	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33253	-850	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATCCACTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	146500226	146553899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.501	chr4	+	3276	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33252	-1720	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	287.112800132631	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	17	True	AATAAA	-25	NA	146500227	146553029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.502	chr4	+	945	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	300.483210845465	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500233	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.503	chr4	+	3223	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-1723	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146500233	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.504	chr4	+	1039	8	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33246	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	261.914614533291	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500233	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.505	chr4	+	2815	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-2045	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.355308018716	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCCAATTGAGAAAAATT	NA	False	NA	NA	False	AATAAA	-31	NA	146500234	146552704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.506	chr4	+	2649	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-2053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.906437923559	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	146500234	146552696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146533486_146533533_146547961_146548020_146548860_146548988_146550416
ES.25022.507	chr4	+	858	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	332.70444842232	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500234	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.508	chr4	+	4041	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-858	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	325.843904346851	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATTATGTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	146500234	146553891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.509	chr4	+	990	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	266.307727179584	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500234	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.51	chr4	+	1106	3	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55196	9720	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCATAAAATTGCATATG	NA	False	NA	NA	False	AATATA	-14	NA	146038197	146105217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146104360
ES.25022.510	chr4	+	7296	2	Intergenic	novelGene_20825	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500234	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146507290_146507868
ES.25022.511	chr4	+	5662	2	Intergenic	novelGene_20826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	151	junction_1	0	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500234	146508109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146500544_146502756
ES.25022.512	chr4	+	2645	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-2059	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	323.502221785261	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	146500234	146552690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.513	chr4	+	860	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500234	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.515	chr4	+	3962	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-852	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	293.616348318686	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	NA	False	NA	NA	False	NA	NA	NA	146500234	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.516	chr4	+	4143	8	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33245	-852	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	260.557878720382	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	NA	False	NA	NA	False	NA	NA	NA	146500234	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146506477_146506590_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.517	chr4	+	3261	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33244	-1723	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	295.700794723315	1848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146500235	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.518	chr4	+	642	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33244	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	321.524785203256	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500235	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.519	chr4	+	793	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33244	-4085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	290.214127843563	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500235	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533381_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.52	chr4	+	6843	5	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	92.2317055030427	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146038204	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146041696_146041784_146054375_146057923_146057981_146058581_146060726
ES.25022.520	chr4	+	3164	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33244	-1718	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGGAATCTTAATATT	NA	False	NA	19	True	AATAAA	-27	NA	146500235	146553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.522	chr4	+	4069	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33243	-868	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	343.345580283189	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146500236	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500584_146502756_146502850_146547961_146548020_146548860_146548988_146550437
ES.25022.523	chr4	+	6942	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33243	1959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.280871423484	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTCAGGAGGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	146500236	146556708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500584_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.525	chr4	+	795	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33234	-4085	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_4	278.624847340569	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500245	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.526	chr4	+	756	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	279.850356837761	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146500249	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146500511_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.527	chr4	+	998	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	264.165352257508	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500249	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.528	chr4	+	2723	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-2059	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	275.60595058888	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTCAAATGAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	146500249	146552690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.529	chr4	+	3678	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	-1292	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	295.700794723315	1848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACACAAACATACAAAAAC	NA	False	NA	NA	False	AATAAA	-31	NA	146500249	146553457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.53	chr4	+	1837	7	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55189	1603	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	190.749763360855	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAATGCAGTGAATGTG	NA	False	NA	NA	False	NA	NA	NA	146038204	146133342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146126784_146126867_146129876_146130004_146131535_146132682_146132850_146133070_146133321
ES.25022.530	chr4	+	5668	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33230	738	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTCTGAGGATTGTTC	NA	False	NA	NA	False	NA	NA	NA	146500249	146555487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.531	chr4	+	887	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	303.837193246647	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	NA	False	NA	NA	False	AAAAAG	-38	NA	146500250	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508055_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.532	chr4	+	4778	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-16903	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	68.0638487010542	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAAATCAGGT	NA	False	NA	NA	False	NA	NA	NA	146500250	146537846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146535762_146535815
ES.25022.533	chr4	+	3320	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-1718	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGGAATCTTAATATT	NA	False	NA	19	True	AATAAA	-27	NA	146500250	146553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.534	chr4	+	4448	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-310	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGATGTAACATCCAGATA	NA	False	NA	NA	False	AATAAA	-16	NA	146500250	146554439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.535	chr4	+	4180	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-858	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	258.749557165483	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATTATGTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	146500250	146553891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.536	chr4	+	3121	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-1723	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.355308018716	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146500250	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.537	chr4	+	3308	2	Genic_Genomic	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-852	multi-exon	FALSE	canonical	0	0	junction_1	0	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	NA	False	NA	NA	False	NA	NA	NA	146500250	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146500373_146550711
ES.25022.538	chr4	+	4127	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-846	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	287.112800132631	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCACTACGGCTCCTGT	NA	False	NA	NA	False	NA	NA	NA	146500250	146553903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.539	chr4	+	3581	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-1286	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	255.877846290417	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATACAAAAACTTCAGT	NA	False	NA	NA	False	AATAAA	-37	NA	146500250	146553463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146508052_146508139_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.54	chr4	+	4133	7	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55189	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.9601276470522	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146038204	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126784_146126867_146129894_146130004_146131535_146132682_146132850
ES.25022.540	chr4	+	2678	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33229	-2251	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	278.693810480247	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAAGCTTTTCATGAT	NA	False	NA	NA	False	AAGAAA	-18	NA	146500250	146552498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.542	chr4	+	2696	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33227	-2060	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	272.465337244942	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTAATTCAAATGAGC	NA	False	NA	NA	False	AATAAA	-16	NA	146500252	146552689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.543	chr4	+	841	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33227	-4085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	284.296011618563	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500252	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146543851_146544022_146547961_146548020_146548860_146548988_146550437
ES.25022.544	chr4	+	3030	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33227	-1724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	296.20573930969	1848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCATCTACGGAATCTT	NA	False	NA	13	True	AATAAA	-21	NA	146500252	146553025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533533_146547963_146548020_146548860_146548988_146550437
ES.25022.545	chr4	+	4353	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33227	-854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	287.467486084175	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCCATCCACTACG	NA	False	NA	NA	False	NA	NA	NA	146500252	146553895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146514367_146514534_146547931_146548020_146548860_146548988_146550437
ES.25022.546	chr4	+	576	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33227	-4085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	343.046917345135	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500252	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146533486_146533533_146547963_146548020_146548860_146548988_146550437
ES.25022.547	chr4	+	4144	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33226	-868	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	259.684049482358	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146500253	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508052_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.548	chr4	+	7015	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33226	1959	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	270.882303265131	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTCAGGAGGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	146500253	146556708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146508008_146508139_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.549	chr4	+	889	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33226	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	279.090586648055	1827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146500253	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.55	chr4	+	8967	2	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	3	intron_retention	FALSE	canonical	3	33	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038204	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375
ES.25022.550	chr4	+	4081	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33226	-868	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	279.837810168676	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146500253	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500544_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.551	chr4	+	4191	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33222	-859	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	308.873695869363	1850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCAATTATGTCCATCCA	NA	False	NA	NA	False	NA	NA	NA	146500257	146553890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508008_146508139_146547961_146548020_146548860_146548988_146550437
ES.25022.553	chr4	+	3821	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33129	-860	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	275.60595058888	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCAATTATGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	146500350	146553889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500373_146502756_146502850_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.554	chr4	+	3316	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-33124	-1720	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	277.674869826805	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	NA	False	NA	17	True	AATAAA	-25	NA	146500355	146553029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146500588_146502756_146502850_146508052_146508139_146533486_146533585_146547931_146548020_146548860_146548988_146550437
ES.25022.555	chr4	+	3162	8	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16690	-1729	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	277.359929716325	1797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAATCATCTACGGA	1804	False	NA	8	True	AATAAA	-16	NA	146516789	146553020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146527888_146527996_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437_146551898_146551969
ES.25022.556	chr4	+	674	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16687	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	1807	False	NA	NA	False	AAAAAG	-32	NA	146516792	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.557	chr4	+	627	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16676	-4085	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	371.977000483752	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	1818	False	NA	NA	False	AAAAAG	-32	NA	146516803	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516998_146547940_146548020_146548860_146548988_146550437
ES.25022.558	chr4	+	652	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16674	-4081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	307.038576566529	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGACTCTGTAAACAGT	1820	False	NA	NA	False	AAAAAG	-36	NA	146516805	146550668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548024_146548877_146548988_146550437
ES.25022.559	chr4	+	644	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16674	-4079	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	1820	False	NA	NA	False	AAAAAG	-38	NA	146516805	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.56	chr4	+	4964	6	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4290	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	81.3127296307288	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146038204	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146056093_146057908_146057981_146058581_146060726_146061381_146061549
ES.25022.560	chr4	+	4411	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16674	-312	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCGATGTAACATCCAGA	1820	False	NA	NA	False	AATAAA	-14	NA	146516805	146554437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.561	chr4	+	3948	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16673	-854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	309.343175130792	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCCATCCACTACG	1821	False	NA	NA	False	NA	NA	NA	146516806	146553895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548024_146548877_146548988_146550437
ES.25022.563	chr4	+	4452	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16670	-865	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	311.851631389031	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTATGCAATTATGTC	1824	False	NA	NA	False	NA	NA	NA	146516809	146553884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146529559_146530158_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.564	chr4	+	3873	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16670	-856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	307.038576566529	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTATGTCCATCCACTA	1824	False	NA	NA	False	NA	NA	NA	146516809	146553893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548024_146548877_146548988_146550437
ES.25022.565	chr4	+	3844	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16645	-850	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATCCACTACGGCTC	1849	False	NA	NA	False	NA	NA	NA	146516834	146553899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.566	chr4	+	3890	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16645	-852	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	302.101572322952	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1849	False	NA	NA	False	NA	NA	NA	146516834	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.567	chr4	+	2694	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16645	-2117	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_3	301.855197073034	1797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTAAGGTCTTTAATGC	1849	False	NA	NA	False	NA	NA	NA	146516834	146552632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146541048_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.568	chr4	+	692	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-4079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	309.343175130792	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTCTGTAAACAGTTT	1852	False	NA	NA	False	AAAAAG	-38	NA	146516837	146550670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548024_146548877_146548988_146550437
ES.25022.569	chr4	+	2640	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-2051	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATGAGCCAATTGAGA	1852	False	NA	NA	False	AATAAA	-25	NA	146516837	146552698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.57	chr4	+	2874	3	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55187	9246	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	29	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAATTCTTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	146038206	146104743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146102109
ES.25022.570	chr4	+	3769	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16642	-863	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	376.009160644909	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATGCAATTATGTCCA	1852	False	NA	NA	False	NA	NA	NA	146516837	146553886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146547961_146548024_146548877_146548988_146550437
ES.25022.572	chr4	+	3909	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-850	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	304.669919749226	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATCCACTACGGCTC	1855	False	NA	NA	False	NA	NA	NA	146516840	146553899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146541117_146541166_146547961_146548020_146548860_146548988_146550437
ES.25022.573	chr4	+	2586	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	292.780463829129	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	1855	False	NA	NA	False	AATAAA	-23	NA	146516840	146552696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437_146551898_146551969
ES.25022.575	chr4	+	2663	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2048	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGCCAATTGAGAAAA	1855	False	NA	NA	False	AATAAA	-28	NA	146516840	146552701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.576	chr4	+	3031	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-1724	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	321.224512607615	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCATCTACGGAATCTT	1855	False	NA	13	True	AATAAA	-21	NA	146516840	146553025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146517030_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.577	chr4	+	2581	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2061	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	367.768949205884	1797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATTTAATTCAAATGAG	1855	False	NA	NA	False	AATAAA	-15	NA	146516840	146552688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437
ES.25022.578	chr4	+	3790	4	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-852	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	367.768949205884	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1855	False	NA	NA	False	NA	NA	NA	146516840	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437
ES.25022.579	chr4	+	3823	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	300.651376181783	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1855	False	NA	NA	False	NA	NA	NA	146516840	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548024_146548877_146548988_146550437
ES.25022.58	chr4	+	2251	3	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55178	10883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATATTTCAGTATCGA	NA	False	NA	NA	False	NA	NA	NA	146038215	146106380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146104360
ES.25022.580	chr4	+	2968	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-1720	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTACGGAATCTTAATA	1855	False	NA	17	True	AATAAA	-25	NA	146516840	146553029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.581	chr4	+	2437	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-2251	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAAGCTTTTCATGAT	1855	False	NA	NA	False	AAGAAA	-18	NA	146516840	146552498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.582	chr4	+	3760	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16637	-854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	293.581062059527	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCCATCCACTACG	1857	False	NA	NA	False	NA	NA	NA	146516842	146553895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437_146551898_146551969
ES.25022.583	chr4	+	3948	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16634	-851	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	300.952222121718	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCATCCACTACGGCT	1860	False	NA	NA	False	NA	NA	NA	146516845	146553898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.584	chr4	+	641	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-4085	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	318.789115247055	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	1861	False	NA	NA	False	AAAAAG	-32	NA	146516846	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146517030_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.585	chr4	+	3842	7	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16633	-861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	292.640089909469	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGCAATTATGTCCATC	1861	False	NA	NA	False	NA	NA	NA	146516846	146553888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437_146551898_146551969
ES.25022.586	chr4	+	3852	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16632	-852	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1862	False	NA	NA	False	NA	NA	NA	146516847	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.587	chr4	+	3043	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16632	-1718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	309.343175130792	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGGAATCTTAATATT	1862	False	NA	19	True	AATAAA	-27	NA	146516847	146553031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548024_146548877_146548988_146550437
ES.25022.588	chr4	+	3711	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16632	-852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	341.726864615587	1799	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCCATCCACTACGGC	1862	False	NA	NA	False	NA	NA	NA	146516847	146553897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146547961_146548020_146548860_146548988_146550437_146551898_146551969
ES.25022.589	chr4	+	2510	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16631	-2263	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	304.163114134505	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGTAAAAATGTAGAAA	1863	False	NA	NA	False	AAGAAA	-6	NA	146516848	146552486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.59	chr4	+	7074	5	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55178	2841	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	214.304106353565	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCTGGACTTCAGCTCA	NA	False	NA	NA	False	TATAAA	-20	NA	146038215	146138166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ES.25022.591	chr4	+	7311	5	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-178551	63394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	193.8001547987	3131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	1881	False	NA	NA	False	AATAAA	-22	NA	146516866	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146697966_146698060_146797295_146800518_146802050_146803919_146804002
ES.25022.592	chr4	+	3865	6	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16588	-865	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	304.163114134505	1799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTATGCAATTATGTC	1906	False	NA	NA	False	NA	NA	NA	146516891	146553884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146518646_146518740_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.593	chr4	+	2683	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16583	-1949	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGCTTCGAGTATTC	1911	False	NA	NA	False	TATAAA	-16	NA	146516896	146552800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.594	chr4	+	2399	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16575	-2248	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCTTTTCATGATACC	1919	False	NA	NA	False	AAGAAA	-21	NA	146516904	146552501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
ES.25022.595	chr4	+	4289	5	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-178463	63386	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	178.237727487757	3131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	1969	False	NA	NA	False	AATAAA	-14	NA	146516954	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146516986_146697966_146698060_146797295_146797381_146800390_146800518_146802050
ES.25022.596	chr4	+	4941	4	FSM	ENSMUSG00000070605.5	ENSMUST00000105733.3	4550	4	-4468	4077	-4468	-4077	multi-exon	FALSE	canonical	3	35	junction_2	316.872564641091	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	NA	False	NA	NA	False	AATACA	-2	NA	146529011	146550672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146533533_146547961_146548020_146548860_146548988_146550437
ES.25022.597	chr4	+	6820	2	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-2497	-16889	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTCTCAAGGTTAGACA	NA	False	NA	NA	False	NA	NA	NA	146530982	146537860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146535758_146535815
ES.25022.598	chr4	+	5633	2	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-1324	-16901	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCAGGTCT	NA	False	NA	NA	False	NA	NA	NA	146532155	146537848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146535756_146535815
ES.25022.599	chr4	+	1975	3	Genic_Genomic	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-163127	-8679	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2679	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCTGCATCAGGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	146532290	146733385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146532388_146727671_146729353_146733188
ES.25022.6	chr4	+	2594	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-41	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	70.528166162337	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033826	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146060726_146061347_146061514
ES.25022.60	chr4	+	7330	7	NNC	ENSMUSG00000066007.16	novel	724	2	NA	NA	-55178	3069	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	183.633390815021	877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTAGTCTCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	146038215	146138394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146094927_146095022_146102109_146102186_146126784_146126867_146129876_146130004_146131535_146138301_146138345
ES.25022.601	chr4	+	3062	2	Intergenic	novelGene_20831	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTCTCAAGGTTAGACA	NA	False	NA	NA	False	NA	NA	NA	146534759	146537860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146535767_146535805
ES.25022.602	chr4	+	2053	1	Intergenic	novelGene_20832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1740	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCAGGTCT	NA	False	NA	NA	False	NA	NA	NA	146535795	146537848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146535800_146537800
ES.25022.603	chr4	+	1432	3	ISM	ENSMUSG00000070605.5	ENSMUST00000105733.3	4550	4	13462	4085	13462	-4085	3prime_fragment	FALSE	canonical	3	35	junction_1	385.5	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146546941	146550664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_146548020_146548860_146548988_146550437
ES.25022.604	chr4	+	4477	2	NIC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	13620	-1723	intron_retention	FALSE	canonical	3	806	junction_1	0	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146547099	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146548988_146550437
ES.25022.605	chr4	+	3336	3	ISM	ENSMUSG00000070605.5	ENSMUST00000105733.3	4550	4	13920	1723	13920	-1723	3prime_fragment	FALSE	canonical	3	35	junction_1	385.5	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATCTACGGAATCTTA	NA	False	NA	14	True	AATAAA	-22	NA	146547399	146553026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_146548020_146548860_146548988_146550437
ES.25022.606	chr4	+	4793	2	NIC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	14159	-868	intron_retention	FALSE	canonical	3	806	junction_1	0	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCCTATGCAATTAT	NA	False	NA	NA	False	NA	NA	NA	146547638	146553881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146548988_146550437
ES.25022.607	chr4	+	2548	3	Fusion	ENSMUSG00000070605.5_ENSMUSG00000056300.15	novel	4550	4	NA	NA	18016	60	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTCTCATAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	146551495	146623912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146551938_146621722_146622134_146622217
ES.25022.608	chr4	+	1291	1	Intergenic	novelGene_20834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	841	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGTTTTGTGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	146555202	146556493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146555200_146556500
ES.25022.609	chr4	+	4534	2	Genic_Genomic	ENSMUSG00000073716.7	novel	780	1	NA	NA	-506	3335	multi-exon	FALSE	non_canonical	0	0	junction_1	0	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGTTGCCAGAGTGAAA	NA	False	NA	NA	False	CATAAA	-15	NA	146559282	146563903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146562273_146562359
ES.25022.61	chr4	+	8482	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4311	5659	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.4852927038918	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTCTGTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	146038225	146068850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146054375_146054480_146058453_146058581_146060726
ES.25022.610	chr4	+	2669	2	Genic_Genomic	ENSMUSG00000081998.2_ENSMUSG00000073716.7	novel	780	1	NA	NA	-493	167	multi-exon	FALSE	canonical	3	12	junction_1	0	932	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGTGAAAATTCTCT	NA	False	NA	NA	False	NA	NA	NA	146559295	146565550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146561061_146564646
ES.25022.611	chr4	+	4604	1	FSM	ENSMUSG00000073716.7	ENSMUST00000094493.5	780	1	-489	-3335	-489	3335	mono-exon	FALSE	NA	NA	NA	NA	NA	926	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGTTGCCAGAGTGAAA	NA	False	NA	NA	False	CATAAA	-15	NA	146559299	146563903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146559300_146563900
ES.25022.612	chr4	+	3854	2	Genic_Genomic	ENSMUSG00000081998.2_ENSMUSG00000073716.7	novel	780	1	NA	NA	-447	1398	multi-exon	FALSE	canonical	3	12	junction_1	0	933	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCACAGGACTCTTAATT	NA	False	NA	11	True	AATAAA	-29	NA	146559341	146566781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146561061_146564646
ES.25022.613	chr4	+	3122	2	Genic_Genomic	ENSMUSG00000073716.7	novel	780	1	NA	NA	-290	2139	multi-exon	FALSE	non_canonical	0	0	junction_1	0	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGGTGAAGTAGAATG	NA	False	NA	NA	False	NA	NA	NA	146559498	146562707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146562273_146562359
ES.25022.614	chr4	+	7228	1	FSM	ENSMUSG00000073716.7	ENSMUST00000094493.5	780	1	-233	-6215	-233	6215	mono-exon	FALSE	NA	NA	NA	NA	NA	933	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAGGACTCTTAATTTA	NA	False	NA	13	True	AATAAA	-31	NA	146559555	146566783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146559600_146566800
ES.25022.615	chr4	+	2092	5	Fusion	ENSMUSG00000073716.7_ENSMUSG00000056300.15	novel	3038	5	NA	NA	-145	-1232	multi-exon	FALSE	canonical	0	0	junction_1	172.993316344881	1445	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTATTGTAACTTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	146559643	146620245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146561061_146575046_146575177_146597241_146597335_146616526_146616611_146619877
ES.25022.616	chr4	+	4122	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-87	182160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.134269833162	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146586396	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599350_146599500_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.617	chr4	+	4045	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-87	182153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146586396	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804237_146804573
ES.25022.618	chr4	+	4092	11	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-87	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.147113430554	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586396	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146611174_146611250_146613735_146613960_146616529_146616611_146619877_146620005_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.62	chr4	+	2895	5	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	4316	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.0832905104375	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146038230	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146038353_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.621	chr4	+	4049	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-85	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586398	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603621_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.622	chr4	+	3985	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-85	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.713079360552	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586398	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.623	chr4	+	3845	11	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-85	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.709768942205	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586398	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146613823_146613960_146616526_146616611_146800390_146800518_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.624	chr4	+	4170	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-83	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.309413382887	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586400	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599350_146599500_146603534_146603615_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.625	chr4	+	4046	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-82	182153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146586401	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803848_146803931_146804170_146804421
ES.25022.626	chr4	+	3624	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-80	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.709839880816	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586403	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.627	chr4	+	4058	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-79	182159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.292710911663	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146586404	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603611_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.628	chr4	+	4208	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-79	181897	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.146107546521	2097	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAATTGACACAGATT	NA	False	NA	NA	False	AATAAA	-31	NA	146586404	146805749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050
ES.25022.629	chr4	+	4123	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-77	182235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGCTGAAGTCATGAA	NA	False	NA	NA	False	AATAAA	-34	NA	146586406	146806087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.63	chr4	+	2639	5	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	12391	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.9854638877991	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAATTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	146046305	146063186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146046422_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.630	chr4	+	3773	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-75	182150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	133.149410183068	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586408	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146616529_146616611_146619877_146620005_146621233_146621402_146802221_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.632	chr4	+	4043	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-69	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	160.012499511757	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586414	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797298_146797381_146800377_146800518_146802050_146802589_146802674_146803848_146803931_146804111_146804363
ES.25022.633	chr4	+	4030	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-68	182150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586415	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802588_146802671_146803902_146804153_146804373_146804456
ES.25022.634	chr4	+	3689	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-62	182153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.035815421923	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146586421	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.635	chr4	+	4060	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-59	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	160.944672170283	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586424	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599380_146599500_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804189_146804523
ES.25022.636	chr4	+	3941	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-59	182154	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146586424	146806006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146803079_146803162_146803281_146803449_146804243_146804573
ES.25022.637	chr4	+	3945	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-55	182159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146586428	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.638	chr4	+	4144	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-55	182159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.114515703801	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146586428	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599380_146599500_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.639	chr4	+	3674	11	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-53	182158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.14448876171	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146586430	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146616529_146616611_146619877_146620005_146621233_146621402_146802221_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.64	chr4	+	6889	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	16103	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.9886356298357	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146050017	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.640	chr4	+	4277	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-53	181912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.263400618299	2097	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTACTTGATAGTGTA	NA	False	NA	NA	False	NA	NA	NA	146586430	146805764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050
ES.25022.641	chr4	+	3998	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-49	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.895389073706	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586434	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.642	chr4	+	4113	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-49	182152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.763940806275	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGACTTGGCTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	146586434	146806004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599380_146599500_146603534_146603615_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.643	chr4	+	3758	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-49	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.176356244394	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586434	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.644	chr4	+	3930	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-49	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586434	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.645	chr4	+	3929	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-48	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586435	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804579
ES.25022.646	chr4	+	3676	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-48	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	136.176356244394	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146586435	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146616526_146616611_146619877_146620005_146802050_146802617_146802784_146803647_146803814_146804170_146804673
ES.25022.647	chr4	+	3994	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	182153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	164.939320939055	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146586445	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146803281_146803449_146804170_146804505
ES.25022.648	chr4	+	3902	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.576575364174	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586445	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.649	chr4	+	3589	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.770487066006	2099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586445	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146616526_146616611_146619877_146620005_146621233_146621601_146802405_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.65	chr4	+	8734	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	18305	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.5	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146052219	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057903_146057991_146058581_146060726
ES.25022.650	chr4	+	3911	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	182160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.576575364174	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146586445	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.651	chr4	+	3748	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	181908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2097	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGATTGTACTTGATAG	NA	False	NA	NA	False	AATAAA	-42	NA	146586445	146805760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.652	chr4	+	3670	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	181888	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.713079360552	2097	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTCAAATGAAGAAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	146586445	146805740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.653	chr4	+	3705	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	181856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2096	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAATAAAACTGGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	146586445	146805708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.654	chr4	+	7014	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-38	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.295140810192	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586445	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.656	chr4	+	3989	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-30	182151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.939320939055	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146586453	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603611_146797295_146797381_146800390_146800518_146802050_146803281_146803449_146804243_146804573
ES.25022.657	chr4	+	2782	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-30	181021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.29163097991	2086	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146586453	146804873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.658	chr4	+	4044	13	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-30	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.039123779695	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586453	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146587190_146587370_146597241_146597335_146603534_146603615_146611174_146611250_146613823_146613960_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.659	chr4	+	3436	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-30	181456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.948821793538	2088	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGACTTCATTTCAG	NA	False	NA	NA	False	NA	NA	NA	146586453	146805308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146795673_146795816_146797298_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.66	chr4	+	3544	4	NNC	ENSMUSG00000066009.9	novel	410	4	NA	NA	20510	193401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5854581808798	1595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCCATCCGCTACG	NA	False	NA	NA	False	NA	NA	NA	146054424	146256592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146054480_146251579_146251707_146253158_146254617_146254688
ES.25022.660	chr4	+	3991	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-30	182149	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.29163097991	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146586453	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803854_146803936_146804170_146804421
ES.25022.661	chr4	+	3992	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-29	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586454	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802583_146802671_146803365_146803449_146804243_146804573
ES.25022.662	chr4	+	3823	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-26	181854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.715179649366	2096	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCTAATAAAACTGGCA	NA	False	NA	NA	False	AATAAA	-21	NA	146586457	146805706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146599380_146599500_146603534_146603615_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.663	chr4	+	4073	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-24	182158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146586459	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803848_146803931_146804170_146804421
ES.25022.664	chr4	+	6922	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-24	182157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.946764448871	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146586459	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797295_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.665	chr4	+	4068	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-23	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	162.313503656929	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146586460	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802587_146802671_146803281_146803449_146803955_146804037
ES.25022.666	chr4	+	8524	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-20	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.242645786248	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586463	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.667	chr4	+	837	1	Genic_Genomic	ENSMUSG00000056300.15	novel	NA	NA	NA	NA	-19	-34176	mono-exon	FALSE	NA	NA	NA	NA	NA	1240	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATACAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	146586464	146587301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146586500_146587300
ES.25022.668	chr4	+	972	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-12	3413	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	175.040709550664	1470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586471	146627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146613823_146613960_146616526_146616611_146619877_146620005_146626770
ES.25022.669	chr4	+	3539	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-10	182151	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	140.168425474498	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146586473	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146603534_146603615_146616526_146616611_146619877_146620005_146621233_146621801_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.67	chr4	+	6128	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	20923	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.5	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146054837	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057873_146057949_146058581_146060726
ES.25022.670	chr4	+	3671	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-9	182157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.446745541988	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146586474	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146603534_146603615_146613823_146613960_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.671	chr4	+	3693	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-9	182218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.397777001426	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTATTTCTCATAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	146586474	146806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146616529_146616611_146619877_146620005_146802050_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.672	chr4	+	3905	10	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-8	182150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.356639979506	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146586475	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800377_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573_146805393_146805469
ES.25022.673	chr4	+	3634	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-8	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.153186722403	2099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586475	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146616526_146616611_146619877_146620005_146621233_146621402_146802221_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.674	chr4	+	1007	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-4	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.180398301415	1470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146586479	146627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146603534_146603615_146616526_146616611_146619877_146620005_146621233_146621333_146626770
ES.25022.675	chr4	+	3974	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-4	182156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.229609665827	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146586479	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146603534_146603615_146797295_146797381_146800390_146800518_146802050_146802590_146802671_146803365_146803449_146804243_146804573
ES.25022.676	chr4	+	3830	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-4	182155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.961572665889	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146586479	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586609_146597241_146597335_146797298_146797381_146800363_146800518_146802050_146802609_146802693_146803281_146803449_146804243_146804573
ES.25022.677	chr4	+	3674	8	Fusion	ENSMUSG00000063245.12_ENSMUSG00000056300.15	novel	3038	5	NA	NA	-4	63395	multi-exon	FALSE	non_canonical	0	0	junction_3	5.20204041600946	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146586479	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146586602_146613823_146613960_146616526_146616611_146740256_146740384_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.678	chr4	+	3682	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	3	182159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.445732783395	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146586486	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146603534_146603615_146611174_146611250_146616529_146616611_146800390_146800518_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.679	chr4	+	2400	7	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	4	181020	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	156.377392512118	2086	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAATGTGACAAATGAT	NA	False	NA	NA	False	NA	NA	NA	146586487	146804872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146616526_146616611_146619877_146620005_146621233_146621767_146802658_146803769_146803936_146804170_146804673
ES.25022.68	chr4	+	5529	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	21541	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.5	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146055455	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057865_146057928_146058581_146060726
ES.25022.680	chr4	+	3664	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	4	182214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.554954906933	2099	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAACTATTTCTCATAA	NA	False	NA	NA	False	AATAAA	-13	NA	146586487	146806066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146586602_146603534_146603615_146616526_146616611_146619877_146620005_146802050_146802609_146802693_146803647_146803814_146804170_146804673
ES.25022.682	chr4	+	4210	8	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-2708	182151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	167.206337151657	2098	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGTTGACTTGGCTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	146596668	146806003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146597122_146597241_146597335_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.683	chr4	+	4139	9	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	-2701	182156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.842187811481	2098	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146596675	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146596991_146597241_146597335_146603534_146603615_146797295_146797381_146800408_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.684	chr4	+	3846	7	NNC	ENSMUSG00000056300.15	novel	578	4	NA	NA	-61	182154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.831998109945	2087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146599315	146806006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146599500_146797295_146797381_146800390_146800518_146802050_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.685	chr4	+	1089	6	NNC	ENSMUSG00000056300.15	novel	578	4	NA	NA	-44	3413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.57799362995	1458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	146599332	146627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146599500_146603534_146603615_146613823_146613960_146616526_146616611_146619877_146620005_146626770
ES.25022.686	chr4	+	4155	7	Fusion	ENSMUSG00000063245.12_ENSMUSG00000056300.15	novel	578	4	NA	NA	-32	63385	multi-exon	TRUE	non_canonical	0	0	junction_1	176.724597420204	2087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146599344	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146599500_146697966_146698060_146797298_146797381_146800390_146800518_146802050_146803178_146803346_146803953_146804037
ES.25022.687	chr4	+	4148	7	Fusion	ENSMUSG00000063245.12_ENSMUSG00000056300.15	novel	578	4	NA	NA	-25	63385	multi-exon	FALSE	canonical	0	0	junction_1	176.724597420204	2087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146599351	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146599500_146697966_146698060_146797298_146797381_146800390_146800518_146802050_146803197_146803365_146803953_146804037
ES.25022.688	chr4	+	4294	6	Fusion	ENSMUSG00000063245.12_ENSMUSG00000056300.15	novel	578	4	NA	NA	-3	63381	multi-exon	FALSE	canonical	0	0	junction_1	185.140595224278	2087	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACAAGGTTGACTTGG	NA	False	NA	NA	False	AATAAA	-9	NA	146599373	146805998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146599500_146697966_146698060_146797295_146797381_146800390_146800518_146802050_146803953_146804037
ES.25022.689	chr4	+	4409	4	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	13377	3413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.482428469283	1456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTCTGATCTTTTT	1574	False	NA	NA	False	NA	NA	NA	146612753	146627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146614573_146614642_146616611_146619877_146620005_146626770
ES.25022.69	chr4	+	5546	2	ISM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	21582	3	21582	-3	3prime_fragment	FALSE	canonical	3	213	junction_1	0	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146055496	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_146058581_146060726
ES.25022.691	chr4	+	4269	6	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	20703	182160	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.4	2084	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	8900	False	NA	NA	False	AATAAA	-23	NA	146620079	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621372_146802193_146802609_146802693_146803236_146803320_146803647_146803814_146804170_146804673
ES.25022.692	chr4	+	3375	5	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	21743	182218	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2080	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTATTTCTCATAAAGTA	9940	False	NA	NA	False	AATAAA	-17	NA	146621119	146806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621402_146802221_146802609_146802693_146803647_146803814_146804173_146804675
ES.25022.693	chr4	+	3210	4	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22115	182158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146621491	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621801_146802693_146803365_146803449_146804243_146804573
ES.25022.694	chr4	+	2778	4	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22115	181731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2072	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTATATGATGAAGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	146621491	146805583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621801_146802693_146803281_146803449_146804170_146804421
ES.25022.695	chr4	+	2866	3	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22116	182155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146621492	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621801_146803029_146804170_146804589
ES.25022.696	chr4	+	2864	4	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22117	182155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146621493	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621801_146802693_146803281_146803449_146803869_146804456
ES.25022.697	chr4	+	2844	4	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22134	182150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146621510	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621780_146803007_146804043_146804377_146804540_146804624
ES.25022.698	chr4	+	521	2	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22322	-1126	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146621698	146622723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621767_146622270
ES.25022.699	chr4	+	1704	2	NNC	ENSMUSG00000056300.15	novel	3038	5	NA	NA	22349	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	146621725	146623849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146621758_146622177
ES.25022.7	chr4	+	2798	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	78.4831192040683	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	146033827	146063192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146043550_146043631_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.70	chr4	+	4945	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	22133	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.5	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146056047	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057870_146057919_146058581_146060726
ES.25022.700	chr4	+	3549	4	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22360	182157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146621736	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146622019_146622354_146622373_146802676_146803596_146803679
ES.25022.701	chr4	+	3367	3	NNC	ENSMUSG00000056300.15	novel	2953	4	NA	NA	22627	182160	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146622003	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146622137_146802693_146803953_146804037
ES.25022.702	chr4	+	3182	5	Fusion	ENSMUSG00000063245.12_ENSMUSG00000056300.15	novel	3038	5	NA	NA	22718	63385	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146622094	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146622126_146622461_146622586_146742602_146742741_146802945_146803293_146803460
ES.25022.703	chr4	+	870	1	Intergenic	novelGene_20837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTCTTCAGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	146625925	146626795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146625900_146626800
ES.25022.704	chr4	+	5684	1	Antisense	novelGene_ENSMUSG00000086046.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAATCAATAACAA	345	False	NA	NA	False	NA	NA	NA	146628130	146633814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_146628100_146633800
ES.25022.705	chr4	+	2326	1	Genic_Genomic	ENSMUSG00000083038.2	novel	NA	NA	NA	NA	-625	17	mono-exon	FALSE	NA	NA	NA	NA	NA	1333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGTAGTTTTGTACAC	NA	False	NA	NA	False	AATAAA	-17	NA	146664460	146666786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146664500_146666800
ES.25022.706	chr4	+	157	1	Intergenic	novelGene_20838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	146665573	146665730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146665600_146665700
ES.25022.707	chr4	+	510	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-24	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	52.5	1335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695393	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695757_146697966_146698060_146703608
ES.25022.708	chr4	+	808	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-19	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	127.839417499716	1343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146695398	146742061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146728915_146728962_146739355_146739418_146740273_146740384_146741834
ES.25022.71	chr4	+	3780	4	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	23116	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.40916292849	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146057030	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057870_146057939_146058581_146060726_146061347_146061514
ES.25022.711	chr4	+	741	6	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	141.920259300778	1343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146695419	146742061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146739355_146739418_146740273_146740384_146741834
ES.25022.712	chr4	+	302	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	13	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	137	1335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695430	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695586_146697966_146698060_146703608
ES.25022.713	chr4	+	217	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	19	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	43.5	1335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695436	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695507_146697966_146698060_146703608
ES.25022.714	chr4	+	802	7	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	129.569372238281	1343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	146695440	146742061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695586_146697966_146698060_146703608_146703692_146728915_146728985_146739355_146739414_146740256_146740384_146741834
ES.25022.715	chr4	+	501	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	29	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_2	9	1335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695446	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695801_146697966_146698060_146703608
ES.25022.716	chr4	+	526	3	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	48	-38402	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	60	1335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146695465	146703662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146695801_146697966_146698060_146703564
ES.25022.718	chr4	+	2220	2	Intergenic	novelGene_20839	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146701223	146703631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146702896_146703083
ES.25022.719	chr4	+	550	1	Intergenic	novelGene_20840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146703081	146703631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146703100_146703600
ES.25022.72	chr4	+	672	1	Intergenic	novelGene_20665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGACAGTATACA	NA	False	NA	NA	False	NA	NA	NA	146057067	146057739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146057100_146057700
ES.25022.720	chr4	+	2426	2	Intergenic	novelGene_20842	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146742708	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146742804_146803679
ES.25022.721	chr4	+	8193	5	Intergenic	novelGene_20843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	202.216931783666	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146795778	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146800518_146802050_146802609_146802693_146803365_146803449_146804170_146804505
ES.25022.722	chr4	+	5076	6	Intergenic	novelGene_20844	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	185.435056016925	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146795973	146806012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146797381_146800390_146800518_146802050_146802588_146802671_146803923_146804006_146804170_146804421
ES.25022.723	chr4	+	4861	6	Intergenic	novelGene_20845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	185.435056016925	1697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATTTCTCATAAAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	146796166	146806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146797381_146800390_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.724	chr4	+	5546	4	Intergenic	novelGene_20846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	103.237590053236	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146797193	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146797381_146800390_146803197_146803365_146803919_146804002
ES.25022.725	chr4	+	3661	4	Intergenic	novelGene_20847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	190.774445062458	1689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATATTATATGATGAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	146797293	146805581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146797381_146800390_146800518_146802050_146803919_146804002
ES.25022.726	chr4	+	3299	6	Intergenic	novelGene_20848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	185.435056016925	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146797329	146806010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146797381_146800390_146800518_146802050_146802588_146803007_146804043_146804377_146804601_146804684
ES.25022.727	chr4	+	6451	6	Intergenic	novelGene_20849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	186.8	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146797365	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146799868_146800024_146800518_146802050_146802609_146802693_146803365_146803449_146804243_146804573
ES.25022.728	chr4	+	6145	4	Intergenic	novelGene_20850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	220.145911209412	1694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146798076	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146800518_146802050_146803197_146803365_146803919_146804002
ES.25022.729	chr4	+	5822	5	Intergenic	novelGene_20851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	202.216931783666	1694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146798137	146806009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146800518_146802050_146802609_146802693_146803365_146803449_146804159_146804505
ES.25022.73	chr4	+	3765	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	23292	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.5	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146057206	146063189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057917_146057988_146058581_146060726
ES.25022.730	chr4	+	6122	2	Intergenic	novelGene_20852	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	467	junction_1	0	1694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146798347	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146800518_146802050
ES.25022.731	chr4	+	7064	4	Intergenic	novelGene_20853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146798438	146806008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802609_146802693_146803281_146803449_146804170_146804421
ES.25022.732	chr4	+	6685	1	Intergenic	novelGene_20854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTAATAAAACTGGCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	146799023	146805708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146799000_146805700
ES.25022.733	chr4	+	3854	2	Intergenic	novelGene_20855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	467	junction_1	0	1681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAATGTGACAAATGAT	NA	False	NA	NA	False	NA	NA	NA	146799485	146804872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146800518_146802050
ES.25022.735	chr4	+	4102	4	Intergenic	novelGene_20856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146801561	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802579_146802662_146803320_146803488_146803953_146804037
ES.25022.736	chr4	+	2992	3	Intergenic	novelGene_20857	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTTTGACTTCATTT	NA	False	NA	NA	False	NA	NA	NA	146802060	146805305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803197_146803365_146803919_146804002
ES.25022.738	chr4	+	3353	4	Intergenic	novelGene_20858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146802313	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802594_146802676_146803320_146803488_146803919_146804002
ES.25022.739	chr4	+	2690	5	Intergenic	novelGene_20859	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146802480	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802609_146802693_146803398_146803566_146803764_146803931_146804100_146804518
ES.25022.74	chr4	+	3427	3	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	23652	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146057566	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146057927_146057981_146058581_146060726
ES.25022.740	chr4	+	2598	5	Intergenic	novelGene_20860	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146802574	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802586_146802669_146803398_146803566_146803782_146803948_146804100_146804518
ES.25022.741	chr4	+	2743	6	Intergenic	novelGene_20861	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.4	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146802671	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802827_146802994_146803236_146803320_146803455_146803538_146804003_146804169_146804373_146804456
ES.25022.742	chr4	+	2576	2	Intergenic	novelGene_20862	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146802678	146806011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146802861_146803617
ES.25022.743	chr4	+	2741	3	Intergenic	novelGene_20863	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146802926	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803742_146803824_146804170_146804421
ES.25022.744	chr4	+	2636	2	Intergenic	novelGene_20864	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	146803119	146806007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146804351_146804602
ES.25022.745	chr4	+	2039	4	Intergenic	novelGene_20865	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGGTTGACTTGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	146803121	146806001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803165_146803332_146803455_146803540_146804201_146804787
ES.25022.746	chr4	+	2322	3	Intergenic	novelGene_20866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146803176	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803281_146803449_146804189_146804523
ES.25022.747	chr4	+	1554	2	Intergenic	novelGene_20867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146803236	146804873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146804672_146804754
ES.25022.748	chr4	+	2521	3	Intergenic	novelGene_20868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGACTTGGCTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	146803314	146806005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803365_146803449_146803953_146804037
ES.25022.749	chr4	+	1842	3	Intergenic	novelGene_20869	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146803490	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146803576_146803658_146804201_146804787
ES.25022.75	chr4	+	5295	2	Genic_Genomic	ENSMUSG00000066009.9	novel	410	4	NA	NA	23905	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146057819	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_146057908_146057981
ES.25022.750	chr4	+	1474	2	Intergenic	novelGene_20870	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146803606	146806002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146804019_146804940
ES.25022.752	chr4	+	4083	1	Intergenic	novelGene_20871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCTTGGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	146808042	146812125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146808000_146812100
ES.25022.76	chr4	+	7261	2	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	27591	5659	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTCTGTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	146061505	146068850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146061513_146061596
ES.25022.77	chr4	+	1493	2	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	27613	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146061527	146063188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146061756_146061923
ES.25022.78	chr4	+	3144	3	Fusion	ENSMUSG00000066009.9_ENSMUSG00000066007.16	novel	2798	4	NA	NA	28229	3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146062143	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_146062227_146132015_146132162_146132413
ES.25022.79	chr4	+	2398	1	Intergenic	novelGene_20666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAGGAAAATAGAAAG	NA	False	NA	NA	False	NA	NA	NA	146064111	146066509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_146064100_146066500
ES.25022.8	chr4	+	2720	5	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-40	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.8322853723112	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033827	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726_146061347_146061514
ES.25022.80	chr4	+	4283	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	35.7805813256297	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146093344	146135327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129894_146130004_146131535
ES.25022.81	chr4	+	4209	4	NIC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-49	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	231.34534070663	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	146093344	146135329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_146093548_146126781_146126867_146129876_146130004_146131535
ES.25022.82	chr4	+	4126	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-49	81	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	190.233190234161	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGAAGTCATGAATA	NA	False	NA	NA	False	AATAAA	-36	NA	146093344	146135406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132094_146132178_146132766_146132934
ES.25022.83	chr4	+	3175	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-49	-1128	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	30.67164814613	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATGTGACAAATGATT	NA	False	NA	NA	False	NA	NA	NA	146093344	146134191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129863_146130004_146131535
ES.25022.84	chr4	+	4144	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-46	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	38.9748636944377	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146093347	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129863_146130004_146131535_146133847_146134014
ES.25022.85	chr4	+	4124	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-43	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	194.988820192338	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	146093350	146135327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129876_146130004_146131535_146133824_146133991
ES.25022.86	chr4	+	4115	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-36	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	194.988820192338	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146093357	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126784_146126867_146129876_146130004_146131535_146133836_146134004
ES.25022.88	chr4	+	3393	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-28	258236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.1058382793471	1897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146093365	146393561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146368115_146368209_146375377_146375458_146384326_146384435_146388486_146388614_146390758
ES.25022.9	chr4	+	3045	6	NNC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	-40	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.4831192040683	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	146033827	146063194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146034017_146036319_146036397_146043550_146043631_146054375_146054480_146058453_146058581_146060726
ES.25022.90	chr4	+	4274	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	-23	-7	-23	1	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	146093370	146135326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ES.25022.91	chr4	+	3096	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-18	-998	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	199.487944497907	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGATAATTTATACAT	NA	False	NA	NA	False	NA	NA	NA	146093375	146134321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146133824_146133991
ES.25022.92	chr4	+	3757	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	190.233190234161	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093376	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132913_146133248_146133824_146133991
ES.25022.93	chr4	+	5634	5	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-4	3	intron_retention	FALSE	non_canonical	0	0	junction_4	18.4712614620659	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146093389	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129863_146133824_146133991
ES.25022.94	chr4	+	4160	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	-2	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	179.446990006024	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146093391	146135328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146102109_146102186_146126784_146126867_146129876_146130004_146131535_146133840_146134007
ES.25022.95	chr4	+	4081	6	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	199.487944497907	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	146093395	146135325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146133855_146134021
ES.25022.97	chr4	+	6344	2	FSM	ENSMUSG00000066007.16	ENSMUST00000151278.8	724	2	3	-5623	3	5623	multi-exon	FALSE	canonical	3	50	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	146093396	146101120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_146093548_146094927
ES.25022.98	chr4	+	3971	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.8525058462102	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACTTGGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	146093398	146135323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129894_146130004_146131535_146132094_146132178_146132766_146132934
ES.25022.99	chr4	+	3397	7	NNC	ENSMUSG00000066007.16	novel	4244	5	NA	NA	6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	190.233190234161	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093399	146135319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535_146132094_146132178_146132682_146133437
ES.25023.1	chr4	-	297	2	Antisense	novelGene_ENSMUSG00000066007.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	171	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	146100483	146041689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_146041823_146100319
ES.25024.1	chr4	-	163	1	Intergenic	novelGene_20667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146111542	146111379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146111400_146111500
ES.25025.1	chr4	-	173	1	Intergenic	novelGene_20669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146190729	146190556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146190600_146190700
ES.25026.1	chr4	-	2308	1	Antisense	novelGene_ENSMUSG00000085525.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGGAAAAAAAAAAA	8124	False	NA	NA	False	AATGAA	-27	NA	146216690	146214382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_146214400_146216700
ES.25027.1	chr4	-	190	1	Intergenic	novelGene_20670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGCAAAGCTTCT	6857	False	NA	NA	False	NA	NA	NA	146217957	146217767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146217800_146218000
ES.25028.1	chr4	-	1896	1	Intergenic	novelGene_20671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCACAAGTTAATTGATTC	882	False	NA	NA	False	NA	NA	NA	146223932	146222036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146222000_146223900
ES.25029.1	chr4	-	3832	2	Intergenic	novelGene_20697	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCCAAAAAAAAAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	146256681	146251397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146251706_146253157
ES.2503.1	chr10	-	1810	3	Intergenic	novelGene_1898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAATTTCTGCTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	25759194	25744147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25745696_25747828_25747949_25759052
ES.2503.2	chr10	-	179	1	Intergenic	novelGene_1899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATGTTTTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	25751734	25751555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_25751600_25751700
ES.25030.1	chr4	-	196	1	Intergenic	novelGene_20702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATACTTGTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	146275748	146275552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146275600_146275700
ES.25031.1	chr4	-	5846	2	Intergenic	novelGene_20728	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	146321962	146290920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146291008_146316203
ES.25031.2	chr4	-	5185	1	Intergenic	novelGene_20729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAATAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	146296112	146290927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146290900_146296100
ES.25031.3	chr4	-	1752	3	Intergenic	novelGene_20730	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAATAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	146385497	146290927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146291460_146368159_146368206_146384323
ES.25031.4	chr4	-	4736	2	Intergenic	novelGene_20736	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	146433765	146292610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146292852_146429270
ES.25031.5	chr4	-	4587	2	Intergenic	novelGene_20735	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	146433616	146292610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146292811_146429229
ES.25031.6	chr4	-	217	1	Intergenic	novelGene_20739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAACCACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146308791	146308574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146308600_146308800
ES.25031.7	chr4	-	178	1	Intergenic	novelGene_20781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATATCC	NA	False	NA	NA	False	NA	NA	NA	146388403	146388225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146388200_146388400
ES.25032.1	chr4	-	2341	1	Intergenic	novelGene_20827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAGAAAAAGGAA	NA	False	NA	NA	False	AATGAA	-19	NA	146509861	146507520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146507500_146509900
ES.25032.2	chr4	-	1307	1	Intergenic	novelGene_20828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	146511107	146509800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146509800_146511100
ES.25032.3	chr4	-	158	1	Intergenic	novelGene_20829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAATAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146511108	146510950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146511000_146511100
ES.25033.1	chr4	-	3404	2	Intergenic	novelGene_20830	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTAAGAAGGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	146519182	146515595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146515762_146515944
ES.25034.1	chr4	-	776	1	Intergenic	novelGene_20833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	146536863	146536087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146536100_146536900
ES.25035.1	chr4	-	178	1	Intergenic	novelGene_20835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAGAAAAATATT	NA	False	NA	NA	False	NA	NA	NA	146571838	146571660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146571700_146571800
ES.25036.1	chr4	-	798	1	Antisense	novelGene_ENSMUSG00000056300.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146597530	146596732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_146596700_146597500
ES.25037.1	chr4	-	6102	1	Intergenic	novelGene_20836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCATTCTAAACATGGA	NA	False	NA	NA	False	NA	NA	NA	146610625	146604523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146604500_146610600
ES.25038.1	chr4	-	164	1	Intergenic	novelGene_20841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	146706647	146706483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146706500_146706600
ES.25039.1	chr4	-	179	1	Intergenic	novelGene_20872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146825645	146825466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146825500_146825600
ES.2504.1	chr10	+	402	1	Genic_Genomic	ENSMUSG00000112324.2	novel	NA	NA	NA	NA	4259	23	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAAGGTGTTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	25779435	25779837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_25779400_25779800
ES.25040.1	chr4	-	178	1	Intergenic	novelGene_20873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAATAAAG	8934	False	NA	NA	False	NA	NA	NA	146896029	146895851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146895900_146896000
ES.25041.1	chr4	-	6010	1	Intergenic	novelGene_20874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGTCTGTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	146912711	146906701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146906700_146912700
ES.25041.10	chr4	-	3038	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	9	63800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.201572947855	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994038	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.11	chr4	-	3109	9	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	18	63800	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	103.675877136391	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994029	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913403_146913790_146914042_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146983728_146983809_146991977_146992072_146993875
ES.25041.12	chr4	-	6288	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	12041	63800	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.306974320474	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146981943	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914279_146976154_146977116_146978205
ES.25041.14	chr4	-	2581	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-20	63797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	146994004	146912355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913192_146913275_146913622_146914378_146914412_146976203_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.15	chr4	-	2795	6	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	11779	63797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.700616267955	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	146982205	146912355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913403_146913874_146914042_146914284_146976159_146977116_146978205_146978333_146982168
ES.25041.16	chr4	-	1357	3	Intergenic	novelGene_20875	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	146914132	146912355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146913192_146913275_146913515_146913850
ES.25041.17	chr4	-	3170	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	7	63797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.667916557158	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	146994040	146912355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146989292_146989426_146991977_146992072_146993875
ES.25041.2	chr4	-	3341	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-24	64131	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.201572947855	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTTTACATATGGTGC	NA	False	NA	NA	False	ATTAAA	-11	NA	146994008	146912021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913739_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.20	chr4	-	2584	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-25	63795	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	146994009	146912357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913170_146913253_146913622_146914378_146914412_146976203_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.21	chr4	-	3002	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-25	63794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994009	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913325_146913409_146913790_146914042_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.23	chr4	-	5807	3	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	13691	63794	intron_retention	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146980293	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914368_146976158
ES.25041.24	chr4	-	2616	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	6	63794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994041	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913178_146913261_146913634_146914389_146914400_146976191_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.25	chr4	-	3206	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	63794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.652691749052	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994047	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146983728_146983809_146991977_146992072_146993875
ES.25041.26	chr4	-	6870	6	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	9	63794	intron_retention	FALSE	non_canonical	0	0	junction_1	121.6	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994038	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913739_146914368_146976158_146977116_146978205_146982273_146991977_146992072_146993875
ES.25041.27	chr4	-	2608	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	17	63794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.377840258012	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994030	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913178_146913597_146913948_146914367_146914412_146976203_146977116_146978205_146978333_146982164_146982273_146991978_146992072_146993875
ES.25041.28	chr4	-	2603	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	17	63794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994030	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913184_146913267_146913622_146914378_146914412_146976203_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993876
ES.25041.29	chr4	-	3322	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	15671	63794	intron_retention	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146978313	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913181_146913264_146913622_146914378_146914412_146976203
ES.25041.3	chr4	-	2885	6	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	9	63920	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.9567929777165	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGTTAATAGTGGTG	NA	False	NA	NA	False	AATAAA	-39	NA	146994038	146912232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913493_146914904_146917069_146917197_146921032_146921137_146983728_146983809_146993882
ES.25041.30	chr4	-	3104	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	17	63794	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.834128686216	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994030	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913328_146913874_146914042_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.31	chr4	-	3108	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	63794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.485060736477	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994047	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914368_146976158_146977116_146978205_146978315_146982168_146982273_146991977_146992072_146993875
ES.25041.32	chr4	-	3025	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	63794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.485060736477	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	146994047	146912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913739_146914368_146976158_146977116_146978205_146978315_146982168_146982273_146991977_146992072_146993875
ES.25041.33	chr4	-	3207	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	9	63792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.667916557158	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAATTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	146994038	146912360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913739_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993135_146993311_146993875
ES.25041.34	chr4	-	9800	9	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	435	63753	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.528405230349	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTCCTGTAACTAAC	NA	False	NA	NA	False	AATAAA	-22	NA	146993549	146912399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913276_146913359_146913958_146914042_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146985661_146988801_146989007_146990751_146991618
ES.25041.35	chr4	-	739	6	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	17	61546	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	111.745424962278	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAAAAACACAACCGA	NA	False	NA	NA	False	NA	NA	NA	146994030	146914606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146914767_146976977_146977116_146978205_146978315_146982168_146982273_146983728_146983809_146993882
ES.25041.36	chr4	-	649	5	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	61501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.527393833689	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGTTTTCTACCATT	NA	False	NA	NA	False	AATACA	-19	NA	146994047	146914651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146914767_146976977_146977116_146978205_146978333_146982168_146982273_146993882
ES.25041.37	chr4	-	695	5	FSM	ENSMUSG00000045699.5	ENSMUST00000049821.4	750	5	29	26	29	-26	multi-exon	FALSE	non_canonical	0	0	junction_3	126.107840755442	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCACTTTGTAAA	NA	False	NA	-28	True	AAAAAG	-32	NA	146994018	146976888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.38	chr4	-	4448	5	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	4000	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.798385750804	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCTTAGCAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	146989984	146977014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146977116_146978205_146978333_146982168_146982273_146985661_146988801_146989007
ES.25041.39	chr4	-	1618	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	-25	-2413	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	3.77123616632825	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACGTTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	146994009	146979275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146980562_146982168_146982273_146991977_146992072_146993875
ES.25041.4	chr4	-	3132	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	63800	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.201572947855	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994047	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913571_146914284_146976159_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.40	chr4	-	531	4	NNC	ENSMUSG00000045699.5	novel	1296	4	NA	NA	4560	-3484	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.9405520948643	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTATAAATGATCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	146989424	146980346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146980562_146982168_146982273_146983728_146983809_146989292
ES.25041.41	chr4	-	2015	1	Intergenic	novelGene_20876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCTCAACTGTACTGT	NA	False	NA	NA	False	NA	NA	NA	146987354	146985339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146985300_146987400
ES.25041.42	chr4	-	5938	2	Genic_Genomic	ENSMUSG00000045699.5	novel	1296	4	NA	NA	-2537	-12914	multi-exon	TRUE	non_canonical	0	0	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTGCAGAGTAGGTCC	NA	False	NA	NA	False	NA	NA	NA	146996584	146989776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_146990751_146991620
ES.25041.43	chr4	-	5142	1	Genic_Genomic	ENSMUSG00000045699.5	novel	NA	NA	NA	NA	-4258	-16301	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACCCTGAAAAGAAAAT	NA	False	NA	NA	False	TATAAA	-34	NA	146998305	146993163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_146993200_146998300
ES.25041.44	chr4	-	268	1	Intergenic	novelGene_20877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTTCTTAACTCCCCT	NA	False	NA	NA	False	AATAAA	-14	NA	146993875	146993607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_146993600_146993900
ES.25041.5	chr4	-	7922	5	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-12	63800	intron_retention	TRUE	non_canonical	0	0	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146993996	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914284_146976159_146982273_146991977_146992072_146993875
ES.25041.6	chr4	-	3049	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	0	63800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.201572947855	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994047	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913320_146913739_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.7	chr4	-	6524	8	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	19	63800	intron_retention	TRUE	non_canonical	0	0	junction_1	105.009814895989	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994028	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913181_146913264_146913622_146914378_146914412_146976203_146977116_146978205_146982273_146983728_146983809_146991977_146992072_146993875
ES.25041.8	chr4	-	3160	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	-28	63800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.201572947855	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994075	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913241_146913577_146914368_146976158_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ES.25041.9	chr4	-	6440	7	NNC	ENSMUSG00000045699.5	novel	750	5	NA	NA	23	63800	intron_retention	TRUE	non_canonical	0	0	junction_1	113.294110859989	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146994024	146912352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_146913178_146913261_146913622_146914378_146914412_146976203_146977116_146978205_146982273_146991977_146992072_146993875
ES.25042.1	chr4	-	135	1	Intergenic	novelGene_20878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAACAGTGA	NA	False	NA	NA	False	NA	NA	NA	147012234	147012099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147012100_147012200
ES.25043.1	chr4	+	329	1	Intergenic	novelGene_20879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	1509	False	NA	10	True	AATAAA	-18	NA	147014695	147015024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147014700_147015000
ES.25044.1	chr4	+	790	5	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-71	-3277	multi-exon	FALSE	canonical	3	25	junction_2	192.803494522273	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGTCTTCTATCATTA	NA	False	NA	NA	False	TATAAA	-18	NA	147056361	147141974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140042_147140183_147141715
ES.25044.10	chr4	+	1186	3	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	-20	38802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	168.5	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	147056412	147114014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147056575_147058404_147058498_147113083
ES.25044.100	chr4	+	6660	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71329	3836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1810708480496	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGGAAAATGTGTTCT	8171	False	NA	16	True	NA	NA	NA	147318801	147422027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147409230_147409335_147413438_147413566_147415724
ES.25044.101	chr4	+	7299	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71325	4606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	8175	False	NA	12	True	NA	NA	NA	147318805	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147409230_147409335_147415724
ES.25044.102	chr4	+	364	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	1173	3	NA	NA	4076	-3340	multi-exon	TRUE	non_canonical	0	0	junction_3	24.2807651352991	1203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTTTACTTTCTTTG	8186	False	NA	NA	False	AATGAA	-11	NA	147318816	147413586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147318928_147337753_147337859_147341252_147341274_147413459
ES.25044.103	chr4	+	4617	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	1173	3	NA	NA	5712	2604	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATTGTTGTCTGGATA	NA	False	NA	NA	False	NA	NA	NA	147343465	147420795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147343632_147416344
ES.25044.104	chr4	+	5759	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	1173	3	NA	NA	5716	3834	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAGTGGAAAATGTGTT	NA	False	NA	14	True	NA	NA	NA	147343469	147422025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147343548_147416344
ES.25044.105	chr4	+	603	1	Intergenic	novelGene_20889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147344004	147344607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147344000_147344600
ES.25044.106	chr4	+	4025	1	Intergenic	novelGene_20890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	803	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTTGTCCTGAGTGTG	720	False	NA	NA	False	NA	NA	NA	147352675	147356700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147352700_147356700
ES.25044.107	chr4	+	5186	1	FSM	ENSMUSG00000082925.2	ENSMUST00000117628.2	3121	1	-418	-1647	-418	1647	mono-exon	FALSE	NA	NA	NA	NA	NA	805	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCACTGTGAAAATTCTC	8059	False	NA	NA	False	NA	NA	NA	147360014	147365200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147360000_147365200
ES.25044.108	chr4	+	1231	1	FSM	ENSMUSG00000082925.2	ENSMUST00000117628.2	3121	1	-372	2262	-372	-2262	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCAAAAAAATTCAGCTG	8105	False	NA	NA	False	ATTAAA	-12	NA	147360060	147361291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147360100_147361300
ES.25044.109	chr4	+	3590	1	FSM	ENSMUSG00000082925.2	ENSMUST00000117628.2	3121	1	-231	-238	-231	238	mono-exon	FALSE	NA	NA	NA	NA	NA	804	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGAGAAGTTTAATCA	8246	False	NA	NA	False	AATAAA	-27	NA	147360201	147363791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147360200_147363800
ES.25044.11	chr4	+	580	5	FSM	ENSMUSG00000086147.3	ENSMUST00000146688.3	2295	5	-13	1728	-13	-1728	multi-exon	FALSE	canonical	3	7	junction_3	133.103343308874	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCTTAGCAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	147056419	147073484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147056575_147058404_147058498_147067150_147067255_147071090_147071218_147073383
ES.25044.110	chr4	+	1389	1	FSM	ENSMUSG00000082925.2	ENSMUST00000117628.2	3121	1	-197	1929	-197	-1929	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAGTAAAAATCT	8280	False	NA	NA	False	ATTAAA	-27	NA	147360235	147361624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147360200_147361600
ES.25044.111	chr4	+	3094	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-368	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.333151382607	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147389762	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390008_147393099_147393241_147409220_147409335_147413438_147413566_147415724
ES.25044.112	chr4	+	6558	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-93	3833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.8562793538911	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGGAAAATGTGT	NA	False	NA	13	True	NA	NA	NA	147390037	147422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416721_147416888
ES.25044.113	chr4	+	6596	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-87	3836	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGGAAAATGTGTTCT	NA	False	NA	16	True	NA	NA	NA	147390043	147422027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147390233_147409230_147409335_147415724
ES.25044.114	chr4	+	7661	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-87	4607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.793035873962	1430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAAAGTGCCTGGTGT	NA	False	NA	13	True	NA	NA	NA	147390043	147422798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147398491_147398579_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.115	chr4	+	6882	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-84	3831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.793035873962	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATAGTGGAAAATGT	NA	False	NA	11	True	NA	NA	NA	147390046	147422022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147398491_147398579_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.116	chr4	+	6684	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-74	3723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.333151382607	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTACTTCATTGT	NA	False	NA	-97	True	NA	NA	NA	147390056	147421914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147398491_147398579_147409230_147409335_147413438_147413566_147415724
ES.25044.117	chr4	+	7490	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-74	-4616	-74	4616	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGGTGTCTCTTCGTG	NA	False	NA	22	True	NA	NA	NA	147390056	147422807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ES.25044.118	chr4	+	7363	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-74	4616	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGGTGTCTCTTCGTG	NA	False	NA	22	True	NA	NA	NA	147390056	147422807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147390233_147409230_147409335_147415724
ES.25044.119	chr4	+	7306	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-74	4607	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	73.2731874562585	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAAAGTGCCTGGTGT	NA	False	NA	13	True	NA	NA	NA	147390056	147422798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147393116_147393194_147409230_147409335_147413438_147413566_147415724_147416849_147417100
ES.25044.12	chr4	+	2611	4	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-13	-6002	multi-exon	FALSE	canonical	3	31	junction_2	125.619354488957	410	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTGGTTACATGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	147056419	147139249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147115003_147115080_147136962
ES.25044.120	chr4	+	5348	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-69	2647	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	73.8562793538911	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCTTGTTGGTTGCAAA	NA	False	NA	-64	True	NA	NA	NA	147390061	147420838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416849_147417016
ES.25044.121	chr4	+	6408	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-69	3834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5356882927706	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAGTGGAAAATGTGTT	NA	False	NA	14	True	NA	NA	NA	147390061	147422025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147415724_147416849_147417016
ES.25044.122	chr4	+	6607	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-67	3831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.2731874562585	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATAGTGGAAAATGT	NA	False	NA	11	True	NA	NA	NA	147390063	147422022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147393116_147393194_147409230_147409335_147413438_147413566_147415724_147416721_147416888
ES.25044.123	chr4	+	7302	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-64	4606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.8562793538911	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147390066	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416721_147416888
ES.25044.124	chr4	+	6759	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-64	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	84.9941174435031	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147390066	147418185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147413161_147413363_147413566_147415724
ES.25044.125	chr4	+	5456	3	NIC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-64	2719	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	22.5	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTTTGTAACGCTGC	NA	False	NA	8	True	TTTAAA	-21	NA	147390066	147420910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147390233_147409230_147409335_147415724
ES.25044.126	chr4	+	6691	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-59	-3832	-59	3832	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATAGTGGAAAATGTG	NA	False	NA	12	True	NA	NA	NA	147390071	147422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ES.25044.127	chr4	+	6760	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-51	3829	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	73.8190354854356	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGAACATAGTGGAAAAT	NA	False	NA	9	True	NA	NA	NA	147390079	147422020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.128	chr4	+	7623	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	4606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.333151382607	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147390084	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147391519_147391691_147409230_147409335_147413438_147413566_147415724
ES.25044.129	chr4	+	7618	7	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	4606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.7129698253701	1430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147390084	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147391519_147391691_147400358_147400439_147409230_147409335_147413438_147413566_147415724_147417219_147417303
ES.25044.13	chr4	+	3311	4	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-13	-5302	multi-exon	FALSE	canonical	3	31	junction_2	125.619354488957	410	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATATTCTTGCCTCATT	NA	False	NA	NA	False	CATAAA	-15	NA	147056419	147139949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147115003_147115080_147136962
ES.25044.130	chr4	+	2841	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	71.6396538238426	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147390084	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147400358_147400439_147409230_147409335_147413438_147413566_147415724_147417219_147417303
ES.25044.131	chr4	+	5423	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-46	-2577	-46	2577	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAACTTTTCCTGATTTT	NA	False	NA	NA	False	NA	NA	NA	147390084	147420768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ES.25044.132	chr4	+	7754	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	4606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.2731874562585	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147390084	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147391519_147391691_147393062_147393194_147409230_147409335_147413438_147413566_147415724
ES.25044.133	chr4	+	3013	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.793035873962	1293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147390084	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147398491_147398579_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.134	chr4	+	5620	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	2687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.333151382607	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGTTTAAAATTGGTAC	NA	False	NA	-24	True	NA	NA	NA	147390084	147420878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147398491_147398579_147409230_147409335_147413438_147413566_147415724
ES.25044.135	chr4	+	7283	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	4605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.8562793538911	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGAAAAGTGCCTGGT	NA	False	NA	11	True	NA	NA	NA	147390084	147422796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416849_147417016
ES.25044.136	chr4	+	6431	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	3838	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	73.8562793538911	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGAAAATGTGTTCTTA	NA	False	NA	18	True	NA	NA	NA	147390084	147422029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724_147416379_147416631
ES.25044.137	chr4	+	6382	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-46	3831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5356882927706	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATAGTGGAAAATGT	NA	False	NA	11	True	NA	NA	NA	147390084	147422022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147390233_147409230_147409335_147415724_147416721_147416888
ES.25044.138	chr4	+	8220	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-46	-5374	-46	5374	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-27	NA	147390084	147423565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ES.25044.139	chr4	+	5534	4	FSM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	-46	-2688	-46	2688	multi-exon	FALSE	canonical	2	12	junction_1	71.5976411777806	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTTTAAAATTGGTACA	NA	False	NA	-23	True	NA	NA	NA	147390084	147420879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147390233_147409230_147409335_147413438_147413566_147415724
ES.25044.14	chr4	+	885	7	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-13	-3280	multi-exon	FALSE	canonical	0	0	junction_2	238.401214109511	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGGGTCTTCTATCA	NA	False	NA	NA	False	TATAAA	-15	NA	147056419	147141971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147111352_147111446_147115003_147115080_147136962_147137048_147140055_147140183_147141715
ES.25044.140	chr4	+	7507	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4816	4609	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7935793234933	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAAGTGCCTGGTGTCT	NA	False	NA	15	True	NA	NA	NA	147394946	147422800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724
ES.25044.141	chr4	+	1013	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181884	-675	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	134.040313173148	2570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAGTGACTGTGACAA	NA	False	NA	NA	False	NA	NA	NA	147394989	147597202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147395730_147395794_147446258_147446261_147449822_147450031_147592042_147592098_147595209_147595337_147596801
ES.25044.142	chr4	+	7329	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4864	4606	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147394994	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147415724
ES.25044.143	chr4	+	6552	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	3833	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGGAAAATGTGT	NA	False	NA	13	True	NA	NA	NA	147394998	147422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147415724
ES.25044.144	chr4	+	6511	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	3833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	76.1162761832185	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGGAAAATGTGT	NA	False	NA	13	True	NA	NA	NA	147394998	147422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724_147416721_147416888
ES.25044.145	chr4	+	727	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181875	-679	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	137.652541648246	2570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAATGTAGTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	147394998	147597198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147592042_147592098_147595209_147595337_147596801
ES.25044.146	chr4	+	5396	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	2718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	76.1162761832185	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGTTTGTAACGCTG	NA	False	NA	7	True	TTTAAA	-20	NA	147394998	147420909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724_147416721_147416888
ES.25044.147	chr4	+	608	4	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-181875	-845	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	137.215969268239	2548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGCAGTGAATGTGAC	NA	False	NA	12	True	NA	NA	NA	147394998	147597032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147591995_147592098_147595209_147595337_147596801
ES.25044.148	chr4	+	6773	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	3840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.333151382607	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAATGTGTTCTTATT	NA	False	NA	20	True	NA	NA	NA	147394998	147422031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147398491_147398579_147409230_147409335_147413438_147413566_147415724
ES.25044.149	chr4	+	7186	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4868	27336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5407823836161	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAATCAGTCAATCAAA	NA	False	NA	NA	False	AAAACA	-3	NA	147394998	147445527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147415724_147416721_147416888_147422791_147445491
ES.25044.150	chr4	+	7520	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4878	4604	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	72.9057610892308	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAAAAGTGCCTGG	NA	False	NA	10	True	NA	NA	NA	147395008	147422795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.151	chr4	+	6852	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4884	4317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.6374840320094	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGACCTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	147395014	147422508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147415724_147416849_147417016
ES.25044.152	chr4	+	7143	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4888	4317	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7935793234933	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGACCTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	147395018	147422508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724
ES.25044.153	chr4	+	8072	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4889	5374	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-27	NA	147395019	147423565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147415724
ES.25044.154	chr4	+	7316	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	4914	4601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.1162761832185	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGGAAAAGTGCC	NA	False	NA	7	True	NA	NA	NA	147395044	147422792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147395147_147409230_147409335_147413438_147413566_147415724_147417219_147417303
ES.25044.155	chr4	+	7220	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-7636	4604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.1810708480496	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAAAAGTGCCTGG	NA	False	NA	10	True	NA	NA	NA	147409227	147422795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147409335_147413438_147413566_147415724_147417219_147417303
ES.25044.156	chr4	+	7532	2	Genic_Genomic	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-6410	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	147410453	147418188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147413161_147413363
ES.25044.157	chr4	+	724	1	Intergenic	novelGene_20892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1088	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATGTTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	147411514	147412238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147411500_147412200
ES.25044.158	chr4	+	10372	2	Genic_Genomic	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-4644	4604	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAAAAGTGCCTGG	NA	False	NA	10	True	NA	NA	NA	147412219	147422795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147413152_147413355
ES.25044.159	chr4	+	5200	3	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-4242	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147412621	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147413155_147413356_147416849_147417016
ES.25044.16	chr4	+	630	5	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	4	-6136	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	136.916945627632	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTATAAATGATCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	147056436	147069076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147056575_147058404_147058498_147065612_147065693_147067150_147067255_147068861
ES.25044.160	chr4	+	5263	2	ISM	ENSMUSG00000078498.6	ENSMUST00000148762.4	2800	4	23304	-2665	-3429	2665	3prime_fragment	FALSE	canonical	3	186	junction_1	0	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTTATATTTCTCTT	NA	False	NA	-46	True	NA	NA	NA	147413434	147420856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147413566_147415724
ES.25044.161	chr4	+	8543	1	FSM	ENSMUSG00000078498.6	ENSMUST00000166764.2	63	1	-3383	-5097	-3383	3832	mono-exon	FALSE	NA	NA	NA	NA	NA	1419	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATAGTGGAAAATGTG	NA	False	NA	12	True	NA	NA	NA	147413480	147422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147413500_147422000
ES.25044.162	chr4	+	5504	2	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-580	4604	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAAAAGTGCCTGG	NA	False	NA	10	True	NA	NA	NA	147416283	147422795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147416291_147417298
ES.25044.163	chr4	+	5659	2	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-397	4606	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	NA	False	NA	12	True	NA	NA	NA	147416466	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147416783_147417454
ES.25044.164	chr4	+	5214	2	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-132	3836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGGAAAATGTGTTCT	NA	False	NA	16	True	NA	NA	NA	147416731	147422027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147417177_147417258
ES.25044.165	chr4	+	4681	2	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	312	3833	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATAGTGGAAAATGTGT	NA	False	NA	13	True	NA	NA	NA	147417175	147422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147417287_147417454
ES.25044.166	chr4	+	4105	1	Intergenic	novelGene_20893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTTGTTTAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	147418266	147422371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147418300_147422400
ES.25044.167	chr4	+	3166	1	Intergenic	novelGene_20894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAACCTGGACACAGA	NA	False	NA	NA	False	NA	NA	NA	147421254	147424420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147421300_147424400
ES.25044.168	chr4	+	2836	1	Intergenic	novelGene_20895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTTGTTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	147421282	147424118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147421300_147424100
ES.25044.169	chr4	+	4457	1	Intergenic	novelGene_20896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	812	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	147422986	147427443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147423000_147427400
ES.25044.17	chr4	+	672	6	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-6	-6	multi-exon	FALSE	non_canonical	0	0	junction_5	249.753158138191	469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	147056452	147145245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141715_147141799_147145083
ES.25044.170	chr4	+	177	1	Intergenic	novelGene_20897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	784	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTGCATAG	NA	False	NA	NA	False	NA	NA	NA	147435337	147435514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147435300_147435500
ES.25044.171	chr4	+	821	5	NNC	ENSMUSG00000078497.10	novel	1250	5	NA	NA	-13	252	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	85.0216884094876	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGTTTCTAAACATAAA	2356	False	NA	86	True	AATAAA	-14	NA	147445746	147474998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147445910_147447267_147447362_147469676_147469759_147472765_147472906_147474656
ES.25044.172	chr4	+	634	4	NNC	ENSMUSG00000078497.10	novel	1250	5	NA	NA	-1	168	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	98.6813052203912	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGGTCTTCTATCATT	2368	False	NA	2	True	TATAAA	-17	NA	147445758	147474914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147445910_147469673_147469759_147472765_147472906_147474656
ES.25044.173	chr4	+	558	5	FSM	ENSMUSG00000078497.10	ENSMUST00000154154.2	1250	5	-6	698	2	17	multi-exon	FALSE	canonical	3	18	junction_1	206.815739246316	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGTCTAGCAATATAAT	2371	False	NA	NA	False	TTTAAA	-4	NA	147445761	147474763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147445910_147447267_147447362_147469676_147469759_147472778_147472906_147474656
ES.25044.174	chr4	+	2790	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	-127842	1	multi-exon	TRUE	non_canonical	0	0	junction_1	47.136397825884	2273	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	5641	False	NA	NA	False	NA	NA	NA	147449031	147669656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147449067_147576884_147577009_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.175	chr4	+	5048	2	NNC	ENSMUSG00000078497.10	novel	1250	5	NA	NA	23764	49	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAGTACACCTCATAAAA	8402	False	NA	NA	False	AATATA	-15	NA	147469531	147474795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147473235_147473450
ES.25044.176	chr4	+	1961	2	Intergenic	novelGene_20898	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTTTTCAGTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	147475575	147477620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147475584_147475667
ES.25044.177	chr4	+	1496	2	Intergenic	novelGene_20899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1982	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147475708	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147475778_147599092
ES.25044.178	chr4	+	1662	2	Intergenic	novelGene_20900	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	147475872	147477619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147476156_147476240
ES.25044.179	chr4	+	168	1	Intergenic	novelGene_20901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	724	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAGTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	147486807	147486975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147486800_147487000
ES.25044.18	chr4	+	642	5	Fusion	ENSMUSG00000086147.3_ENSMUSG00000078497.10	novel	2295	5	NA	NA	15	146	multi-exon	FALSE	canonical	3	25	junction_2	112.144995430024	2224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGACTGTGTAAACTG	NA	False	NA	-20	True	CATAAA	-28	NA	147056473	147474892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147472778_147472906_147474656
ES.25044.180	chr4	+	7128	2	Intergenic	novelGene_20902	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTCTTTTCTAAGCA	NA	False	NA	NA	False	AAGAAA	-3	NA	147487825	147496234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147490779_147492059
ES.25044.181	chr4	+	4430	5	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-374	3335	multi-exon	TRUE	canonical	0	0	junction_4	143.695859369712	1594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTTTTTTTTTTTT	NA	False	NA	10	True	AATAGA	-18	NA	147527553	147601278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147592042_147592098_147595209_147595337_147596801_147597042_147597713
ES.25044.182	chr4	+	2896	7	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-374	2577	multi-exon	FALSE	non_canonical	0	0	junction_5	122.494557702237	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147527553	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752_147599561_147600430
ES.25044.183	chr4	+	4520	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-369	3335	multi-exon	FALSE	non_canonical	0	0	junction_5	127.798904533646	1594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTTTTTTTTTTTT	NA	False	NA	10	True	AATAGA	-18	NA	147527558	147601278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.184	chr4	+	5745	2	Genic_Genomic	ENSMUSG00000082248.2	novel	559	1	NA	NA	-335	13025	multi-exon	FALSE	canonical	3	49	junction_1	0	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCTCTGGTAAAACT	NA	False	NA	NA	False	NA	NA	NA	147527592	147541511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147527997_147536170
ES.25044.185	chr4	+	3554	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-155	2583	multi-exon	FALSE	non_canonical	0	0	junction_5	127.798904533646	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAC	NA	False	NA	13	True	NA	NA	NA	147527772	147600526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.186	chr4	+	3234	3	Genic_Genomic	ENSMUSG00000082248.2	novel	559	1	NA	NA	-102	14379	multi-exon	FALSE	canonical	0	0	junction_2	24.5	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATTACATTGCTTGAT	NA	False	NA	NA	False	TATAAA	-23	NA	147527825	147542865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147527997_147536170_147536264_147539895
ES.25044.187	chr4	+	3489	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-93	2581	multi-exon	FALSE	non_canonical	0	0	junction_5	127.798904533646	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTTGGTTGTTTTCA	NA	False	NA	11	True	NA	NA	NA	147527834	147600524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.188	chr4	+	3477	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-82	2578	multi-exon	FALSE	non_canonical	0	0	junction_1	139.87651697122	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGCTTTGGTTGTTT	NA	False	NA	8	True	NA	NA	NA	147527845	147600521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147578832_147578927_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.189	chr4	+	3678	7	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-82	2576	multi-exon	FALSE	non_canonical	0	0	junction_1	130.419408916856	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147527845	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147535629_147535835_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.19	chr4	+	553	4	ISM	ENSMUSG00000086147.3	ENSMUST00000146688.3	2295	5	1970	1602	1944	-1602	3prime_fragment	FALSE	canonical	3	7	junction_2	17.7451088722749	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	147058402	147073610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147058498_147067150_147067255_147071090_147071218_147073383
ES.25044.190	chr4	+	3618	7	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-56	2577	multi-exon	FALSE	non_canonical	0	0	junction_1	129.137416042843	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147527871	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147533785_147533956_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.191	chr4	+	4174	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-34	3325	multi-exon	FALSE	non_canonical	0	0	junction_5	127.798904533646	1594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTGTGTGTGGGTT	NA	False	NA	0	True	AATAGA	-8	NA	147527893	147601268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.192	chr4	+	3578	7	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-33	2577	multi-exon	FALSE	non_canonical	0	0	junction_6	128.417288555708	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147527894	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147578832_147578938_147591995_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.193	chr4	+	13616	1	FSM	ENSMUSG00000082248.2	ENSMUST00000120609.2	559	1	-32	-13025	-32	13025	mono-exon	FALSE	NA	NA	NA	NA	NA	1006	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCTCTGGTAAAACT	NA	False	NA	NA	False	NA	NA	NA	147527895	147541511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147527900_147541500
ES.25044.194	chr4	+	3469	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082248.2	novel	1244	3	NA	NA	-30	2577	multi-exon	FALSE	non_canonical	0	0	junction_5	133.081328517565	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147527897	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147527997_147536170_147536264_147591995_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.195	chr4	+	3507	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43274	2576	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	127.559554718571	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533599	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597165_147597836
ES.25044.196	chr4	+	3676	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43269	2578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	132.859324098838	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGCTTTGGTTGTTT	NA	False	NA	8	True	NA	NA	NA	147533604	147600521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.197	chr4	+	3674	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43267	2579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	132.859324098838	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGCTTTGGTTGTTTT	NA	False	NA	9	True	NA	NA	NA	147533606	147600522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.198	chr4	+	3673	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43267	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.150321546466	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147533606	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147590351_147590522_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.199	chr4	+	5518	2	Intergenic	novelGene_20903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	1006	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCTCTGGTAAAACT	NA	False	NA	NA	False	NA	NA	NA	147533608	147541511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147533786_147536170
ES.25044.2	chr4	+	1204	3	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	309	2	NA	NA	-68	5715	multi-exon	FALSE	non_canonical	0	0	junction_2	42	406	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATGAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-28	NA	147056364	147113983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147107818_147107913_147113083
ES.25044.20	chr4	+	5925	1	Intergenic	novelGene_20880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCGAGACTGTATTCCT	NA	False	NA	NA	False	AATGAA	-9	NA	147058664	147064589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147058700_147064600
ES.25044.200	chr4	+	3501	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43265	2578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	127.559554718571	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTGCTTTGGTTGTTT	NA	False	NA	8	True	NA	NA	NA	147533608	147600521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.201	chr4	+	3837	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43263	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	132.299428906133	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533610	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147590351_147590522_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.202	chr4	+	2798	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43263	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	126.138482100692	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533610	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711_147599561_147600430
ES.25044.203	chr4	+	2666	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43254	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	126.251952680169	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533619	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147591995_147592098_147595209_147595337_147596801_147597042_147597711_147599561_147600430
ES.25044.204	chr4	+	3818	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43245	2914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	127.559554718571	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTTACATATGGTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	147533628	147600857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.205	chr4	+	4496	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43244	14854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.640691391497	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTTTGATTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	147533629	147612797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752_147599561_147610820
ES.25044.206	chr4	+	3468	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43232	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.87651697122	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533641	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147578832_147578927_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.207	chr4	+	4216	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43227	3331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	127.559554718571	1594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGGGTTTTTTTT	NA	False	NA	6	True	AATAGA	-14	NA	147533646	147601274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.208	chr4	+	3486	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43227	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	133.228525474089	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147533646	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592019_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.209	chr4	+	3510	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43226	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.87651697122	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147533647	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147578832_147578927_147591995_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.21	chr4	+	1623	4	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	3724	-5044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8174071805952	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTATGCATATGTG	NA	False	NA	NA	False	AATAAA	-42	NA	147060182	147070168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147060315_147065612_147065693_147067150_147067255_147068861
ES.25044.210	chr4	+	3680	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43226	2579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	137.603197637264	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGCTTTGGTTGTTTT	NA	False	NA	9	True	NA	NA	NA	147533647	147600522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147591995_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.212	chr4	+	2931	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43226	13137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	129.137416042843	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGCTGAGTTAAAGTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	147533647	147611080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533956_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752_147599561_147610820
ES.25044.213	chr4	+	3462	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43226	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	127.559554718571	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147533647	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.214	chr4	+	1975	3	Intergenic	novelGene_20904	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	6.5	1006	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147533654	147541476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147533956_147536170_147536264_147539895
ES.25044.215	chr4	+	2673	4	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	-104076	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4386032649185	1857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147533657	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147661528_147661587_147665698_147665826_147667290
ES.25044.216	chr4	+	3328	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43211	3329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	122.33208446229	1594	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGTGTGGGTTTTTT	NA	False	NA	4	True	AATAGA	-12	NA	147533662	147601272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597082_147597752_147599561_147600430
ES.25044.217	chr4	+	3492	6	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43211	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	132.871366366121	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533662	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147591995_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.218	chr4	+	3643	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43203	2576	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	130.419408916856	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533670	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147535629_147535835_147536170_147536264_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.219	chr4	+	4376	8	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43192	3335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.048048623696	1594	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTTTTTTTTTTTT	NA	False	NA	10	True	AATAGA	-18	NA	147533681	147601278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147578832_147578938_147582657_147582743_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.22	chr4	+	2789	2	Intergenic	novelGene_20881	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGCGAGACTGT	NA	False	NA	NA	False	NA	NA	NA	147061819	147114014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147062018_147111423
ES.25044.220	chr4	+	3506	7	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-43167	2576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	126.671162200926	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147533706	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147533786_147536170_147536264_147578832_147578938_147592042_147592098_147595209_147595337_147596801_147597082_147597752
ES.25044.221	chr4	+	3299	5	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	-40677	2577	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	136.210315321564	1591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147536196	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147536264_147592042_147592098_147595209_147595337_147596801_147597191_147597859
ES.25044.222	chr4	+	2699	4	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	-92145	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.6118565998942	1817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147545588	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147545711_147661481_147661572_147665698_147665826_147667290
ES.25044.223	chr4	+	535	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-31285	-845	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	124.355086345513	1432	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGCAGTGAATGTGAC	NA	False	NA	12	True	NA	NA	NA	147545588	147597032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147545596_147576893_147577009_147592042_147592098_147595209_147595337_147596801
ES.25044.224	chr4	+	3756	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-363	2576	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	143.459706886638	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGGTTGCTTTGGTTGT	NA	False	NA	6	True	NA	NA	NA	147576510	147600519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147577038_147592042_147592098_147595209_147595337_147596801_147597132_147597802
ES.25044.225	chr4	+	3457	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-62	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	143.459706886638	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147576811	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147577038_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.226	chr4	+	3547	6	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-47	2577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	136.980874577439	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147576826	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147577038_147578832_147578938_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.227	chr4	+	3461	5	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-21	2575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	143.695859369712	1545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAAGGTTGCTTTGGTTG	NA	False	NA	5	True	NA	NA	NA	147576852	147600518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147577038_147591995_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.229	chr4	+	657	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	-7	-13	multi-exon	FALSE	non_canonical	0	0	junction_1	45.145985425063	1811	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCAACAAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	147576866	147669642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147577009_147641551_147641685_147661528_147661587_147665698_147665826_147667290_147667407_147669561
ES.25044.23	chr4	+	2796	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000086147.3	novel	2295	5	NA	NA	10698	0	multi-exon	FALSE	canonical	2	7	junction_1	73.4892282356174	1833	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147067156	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147067255_147409230_147409335_147413438_147413566_147415724
ES.25044.230	chr4	+	1222	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	-6	-3801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.3954360429878	1368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCATCCGTTATTTCTGC	NA	False	NA	12	True	AAGAAA	-15	NA	147576867	147594076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147577009_147580452_147580533_147591995_147592098_147593177
ES.25044.231	chr4	+	2765	5	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	-5	-5	multi-exon	FALSE	canonical	0	0	junction_1	48.1300322044355	1811	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147576868	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147577009_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.232	chr4	+	6766	3	Fusion	ENSMUSG00000078496.10_ENSMUSG00000065999.14	novel	1488	4	NA	NA	31	0	intron_retention	FALSE	canonical	3	27	junction_1	37	1811	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147576904	147669655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147577009_147661528_147665826_147667290
ES.25044.233	chr4	+	1667	6	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	3189	1774	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	134.8	1494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTGGCATATGTTTT	NA	False	NA	NA	False	AAAACA	-37	NA	147595245	147599717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147595337_147596801_147597378_147597462_147597596_147597930_147598133_147598801_147599093_147599343
ES.25044.235	chr4	+	2261	3	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	5029	3329	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGTGTGGGTTTTTT	NA	False	NA	4	True	AATAGA	-12	NA	147597085	147601272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147597093_147597344_147597429_147599102
ES.25044.236	chr4	+	8968	2	NNC	ENSMUSG00000078496.10	novel	1244	3	NA	NA	5803	36441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGGCTACATTCTTT	NA	False	NA	NA	False	NA	NA	NA	147597859	147634384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147599561_147627117
ES.25044.237	chr4	+	1478	2	Intergenic	novelGene_20909	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTTGCTTTGGTTGTT	NA	False	NA	7	True	NA	NA	NA	147597953	147600520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147598049_147599137
ES.25044.238	chr4	+	6156	1	FSM	ENSMUSG00000096440.2	ENSMUST00000179853.2	382	1	-4539	-1235	-4539	1235	mono-exon	FALSE	NA	NA	NA	NA	NA	612	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTACTTTTTCTTGCACTG	NA	False	NA	NA	False	NA	NA	NA	147601448	147607604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147601400_147607600
ES.25044.239	chr4	+	232	1	Intergenic	novelGene_20910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTGTGGGACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	147603179	147603411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147603200_147603400
ES.25044.24	chr4	+	7373	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000086147.3	novel	2295	5	NA	NA	10716	4616	multi-exon	TRUE	non_canonical	0	0	junction_3	16.5586080332859	1970	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTGGTGTCTCTTCGTG	NA	False	NA	22	True	NA	NA	NA	147067174	147422807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147067255_147071090_147071218_147073383_147074256_147074339_147075046_147417219
ES.25044.240	chr4	+	3455	1	Intergenic	novelGene_20911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	587	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTATTTGTCTAGTATT	NA	False	NA	NA	False	NA	NA	NA	147614048	147617503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147614000_147617500
ES.25044.241	chr4	+	176	1	Intergenic	novelGene_20912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATATATTCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	147624015	147624191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147624000_147624200
ES.25044.242	chr4	+	630	1	Intergenic	novelGene_20914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	147628588	147629218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147628600_147629200
ES.25044.243	chr4	+	2812	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1731944953718	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637680	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665716_147665826_147667290
ES.25044.244	chr4	+	2036	3	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	-45	-2419	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_2	25.5	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTGCTTTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	147637688	147664979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661528_147661587_147663196
ES.25044.245	chr4	+	2890	6	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.094756681683	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637694	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147639766_147639861_147646898_147646979_147661528_147661587_147665716_147665826_147667290
ES.25044.246	chr4	+	2850	5	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1731944953718	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	147637694	147669657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147661481_147661587_147665716_147665826_147667290
ES.25044.247	chr4	+	2711	4	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	19.9053315024448	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	147637703	147669654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661528_147661587_147665716_147665826_147667290
ES.25044.248	chr4	+	2730	4	FSM	ENSMUSG00000065999.14	ENSMUST00000139784.8	628	4	-30	-2072	-30	0	multi-exon	FALSE	canonical	3	55	junction_1	19.7540431867054	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637703	147669655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290
ES.25044.249	chr4	+	2764	4	NIC	ENSMUSG00000065999.14	novel	552	6	NA	NA	-22	-5	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	33.2498955721	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637711	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147637884_147661481_147661587_147665698_147665826_147667290
ES.25044.25	chr4	+	1062	3	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	17315	716	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAATTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147073773	147075928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147073782_147074117_147074290_147075046
ES.25044.251	chr4	+	2802	5	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.4104998699585	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637711	147669655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.252	chr4	+	2892	6	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.1397728320398	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	147637716	147669656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147639766_147639861_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.253	chr4	+	2810	5	NIC	ENSMUSG00000065999.14	novel	552	6	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	45.8986655579441	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	147637716	147669657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147637884_147647371_147647416_147661481_147661587_147665698_147665826_147667290
ES.25044.254	chr4	+	2941	6	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.1397728320398	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTTGTTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	147637717	147669659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147639766_147639861_147646898_147646979_147661481_147661587_147665698_147665826_147667290
ES.25044.255	chr4	+	2810	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	44.3452364972835	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637717	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147641585_147641685_147661528_147661587_147665698_147665826_147667290
ES.25044.256	chr4	+	2691	4	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.2876091178294	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	147637725	147669653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661528_147661572_147665698_147665826_147667290
ES.25044.257	chr4	+	2880	6	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.4904291225624	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAAGTTTGCTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	147637725	147669648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147641585_147641685_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.258	chr4	+	2843	6	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	38.3583107031579	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637726	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147647356_147647416_147661528_147661587_147665698_147665826_147667290
ES.25044.259	chr4	+	2872	6	FSM	ENSMUSG00000065999.14	ENSMUST00000143885.8	552	6	-68	-2252	-6	-5	multi-exon	FALSE	canonical	2	6	junction_3	37.9420610931984	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637727	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661481_147661587_147665698_147665826_147667290
ES.25044.26	chr4	+	5570	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000086147.3	novel	2295	5	NA	NA	18422	4601	multi-exon	TRUE	canonical	0	0	junction_1	0	1962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGGAAAAGTGCC	NA	False	NA	7	True	NA	NA	NA	147074880	147422792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147075046_147417387
ES.25044.260	chr4	+	2826	6	FSM	ENSMUSG00000065999.14	ENSMUST00000081742.7	2762	6	-67	3	-5	-3	multi-exon	FALSE	canonical	3	18	junction_2	34.5913283931103	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637728	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
ES.25044.261	chr4	+	2967	7	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.1615183545096	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637732	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147639766_147639861_147641589_147641685_147646898_147646979_147661528_147661587_147665698_147665826_147667290
ES.25044.262	chr4	+	2839	6	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	37.3876985116763	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637734	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147647371_147647416_147661481_147661561_147665698_147665826_147667290
ES.25044.263	chr4	+	2899	6	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.094756681683	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637734	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147639766_147639861_147646898_147646979_147661481_147661587_147665716_147665826_147667290
ES.25044.264	chr4	+	913	1	NIC	ENSMUSG00000065999.14	novel	628	4	NA	NA	1	-28751	mono-exon	FALSE	NA	NA	NA	NA	NA	720	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACCCTGAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	147637734	147638647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147637700_147638600
ES.25044.265	chr4	+	2820	5	NIC	ENSMUSG00000065999.14	novel	552	6	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.4104998699585	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637735	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147637884_147646898_147646979_147661481_147661587_147665698_147665826_147667290
ES.25044.266	chr4	+	2786	5	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.2048575403353	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	147637738	147669652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147661481_147661572_147665716_147665826_147667290
ES.25044.267	chr4	+	2715	4	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	30.6195289897731	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	147637745	147669653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661481_147661587_147665716_147665826_147667290
ES.25044.268	chr4	+	2263	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	12	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	39.5434887181189	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637745	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290_147667905_147668324
ES.25044.269	chr4	+	2783	5	NNC	ENSMUSG00000065999.14	novel	552	6	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.7552391922259	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637746	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147646898_147646979_147661481_147661561_147665698_147665826_147667290
ES.25044.27	chr4	+	4698	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000086147.3	novel	2295	5	NA	NA	18618	3840	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAATGTGTTCTTATT	NA	False	NA	20	True	NA	NA	NA	147075076	147422031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147075198_147417454
ES.25044.270	chr4	+	2637	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.5434887181189	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147637746	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290_147668501_147668545
ES.25044.272	chr4	+	2724	4	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	3710	-5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	38.870154217457	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147641505	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147641685_147661528_147661587_147665698_147665826_147667290
ES.25044.273	chr4	+	2801	6	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	3757	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.0979318214433	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147641552	147669650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147641685_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
ES.25044.274	chr4	+	2351	4	ISM	ENSMUSG00000065999.14	ENSMUST00000143885.8	552	6	9599	-1990	9599	-267	3prime_fragment	FALSE	canonical	2	6	junction_1	42.6223728418147	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATTTAAATGATCC	NA	False	NA	NA	False	AATAAA	-17	NA	147647394	147669388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147647416_147661481_147661587_147665698_147665826_147667290
ES.25044.275	chr4	+	10448	3	NNC	ENSMUSG00000065999.14	novel	628	4	NA	NA	19738	1	intron_retention	FALSE	non_canonical	0	0	junction_1	50.5	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	147657533	147669656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147657605_147657814_147665826_147667290
ES.25044.276	chr4	+	8288	1	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	23572	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	819	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147661367	147669655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147661400_147669700
ES.25044.277	chr4	+	3568	3	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	31783	10205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATGGAGCATGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	147669578	147679860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147672013_147678310_147679014_147679429
ES.25044.278	chr4	+	944	1	Intergenic	novelGene_20915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATGTGTAGTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	147671061	147672005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147671100_147672000
ES.25044.28	chr4	+	2383	1	Intergenic	novelGene_20882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTCGGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	147079197	147081580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147079200_147081600
ES.25044.29	chr4	+	179	1	Intergenic	novelGene_20883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	147092210	147092389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147092200_147092400
ES.25044.3	chr4	+	923	6	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-62	-3195	multi-exon	FALSE	canonical	3	31	junction_2	223.318248246757	421	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGTTTCTAGACAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	147056370	147142056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147115003_147115080_147136965_147137048_147140055_147140183_147141715
ES.25044.30	chr4	+	3614	9	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	-46	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	237.070367981745	361	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	2237	False	NA	NA	False	AATAAA	-22	NA	147106260	147145254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147106458_147107818_147107913_147115003_147115080_147136962_147137048_147140055_147140183_147141715_147142355_147142438_147142757_147142924_147143596_147143847
ES.25044.31	chr4	+	947	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	-15	-3194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	273.70158932677	313	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGTTTCTAGACAAAAC	2268	False	NA	NA	False	AATAAA	-14	NA	147106291	147142057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147106458_147107818_147107913_147109596_147109730_147136962_147137048_147140055_147140183_147141715
ES.25044.32	chr4	+	3908	5	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	2	-3167	intron_retention	FALSE	canonical	2	6	junction_2	191.782428809315	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACACTTACACTTGT	2285	False	NA	NA	False	AATAAA	-41	NA	147106308	147142084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147106458_147107818_147107913_147115003_147115080_147136962_147140183_147141715
ES.25044.33	chr4	+	834	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	13	-3278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.061984976748	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGGTCTTCTATCATT	2296	False	NA	NA	False	TATAAA	-17	NA	147106319	147141973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147106517_147107818_147107913_147115003_147115080_147136965_147137048_147140055_147140183_147141715
ES.25044.34	chr4	+	597	6	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	4	-3437	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	257.898894918144	309	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGTAATGAGCTTAGA	2315	False	NA	NA	False	NA	NA	NA	147106338	147141814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147106458_147107818_147107913_147115003_147115080_147136965_147137048_147140055_147140183_147141715
ES.25044.35	chr4	+	2863	5	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	33766	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	208.279109610157	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGGCTGTTTTCAGT	7860	False	NA	NA	False	AATAAA	-20	NA	147140100	147145252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147140183_147141715_147142355_147142438_147142901_147143153_147143614_147144032
ES.25044.36	chr4	+	2852	4	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	35645	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTTGGCTGTTTTCA	9739	False	NA	NA	False	AATAAA	-18	NA	147141979	147145250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147142366_147142449_147143082_147143165_147143513_147143763
ES.25044.37	chr4	+	1734	2	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	36002	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	147142336	147145245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147142779_147143953
ES.25044.38	chr4	+	2597	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000078497.10_ENSMUSG00000067919.9	novel	3993	5	NA	NA	36821	2158	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	147143155	147477619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147143332_147264313_147264322_147416688_147416692_147475209
ES.25044.39	chr4	+	1989	2	NNC	ENSMUSG00000067919.9	novel	3993	5	NA	NA	36839	332367	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	2142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTTTCAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	147143173	147477618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147143366_147475821
ES.25044.4	chr4	+	3914	5	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-41	-3194	intron_retention	FALSE	canonical	3	31	junction_2	171.552287947436	421	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGTTTCTAGACAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	147056391	147142057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147115003_147115080_147136962_147140183_147141715
ES.25044.41	chr4	+	745	1	ISM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	37933	267	37905	-267	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCAAATGAAGAAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	147144239	147144984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147144200_147145000
ES.25044.42	chr4	+	6008	5	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082779.2	novel	1244	3	NA	NA	-88	5194	multi-exon	TRUE	non_canonical	0	0	junction_1	143.932927087585	2899	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTTGCCTGGATTC	NA	False	NA	NA	False	NA	NA	NA	147209624	147603137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147209785_147592042_147592098_147595209_147595337_147596801_147597042_147597711
ES.25044.43	chr4	+	3381	5	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082779.2	novel	1244	3	NA	NA	-75	2579	multi-exon	TRUE	non_canonical	0	0	junction_1	143.932927087585	2892	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGCTTTGGTTGTTTT	NA	False	NA	9	True	NA	NA	NA	147209637	147600522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147209785_147592042_147592098_147595209_147595337_147596801_147597042_147597710
ES.25044.45	chr4	+	2777	6	Fusion	ENSMUSG00000078496.10_ENSMUSG00000082779.2	novel	1244	3	NA	NA	-32	1923	multi-exon	FALSE	non_canonical	0	0	junction_3	129.208978016235	2881	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCAAGCCTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	147209680	147599866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147209785_147536170_147536264_147592042_147592102_147595209_147595337_147596801_147597082_147597752
ES.25044.46	chr4	+	6578	6	Fusion	ENSMUSG00000067916.10_ENSMUSG00000082779.2	novel	454	2	NA	NA	-7	4187	multi-exon	TRUE	non_canonical	0	0	junction_1	35.0314144732981	694	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAATTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	147209705	147269223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147209785_147249797_147249867_147260303_147260362_147261203_147261331_147262781_147267440_147267636
ES.25044.47	chr4	+	3962	6	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-16	1182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.5593202461581	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	147216478	147266218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147216647_147219028_147219122_147224497_147224577_147260303_147260362_147261203_147261331_147262781
ES.25044.48	chr4	+	5515	3	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-15	-36682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	147216479	147224547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147216647_147219028_147219975_147220145
ES.25044.49	chr4	+	3705	3	NIC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	14	1185	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.5	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	NA	False	NA	NA	False	NA	NA	NA	147216508	147266221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147216647_147261203_147261331_147262781
ES.25044.5	chr4	+	1309	4	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	-41	38771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.394023456274	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATGAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-28	NA	147056391	147113983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147056575_147058404_147058498_147060181_147060315_147113083
ES.25044.50	chr4	+	6908	7	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	16	4196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53.4740331583678	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTCAGGAGGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	147216510	147269232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147216818_147219028_147219122_147249797_147249867_147260303_147260362_147261203_147261331_147262781_147267440_147267636
ES.25044.51	chr4	+	3954	7	FSM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	33	-1174	33	1174	multi-exon	TRUE	canonical	1	2	junction_5	76.9805170156709	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGCAATTATGTCCATC	NA	False	NA	NA	False	NA	NA	NA	147216527	147266210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_147216647_147219028_147219122_147224494_147224577_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.52	chr4	+	5136	5	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	8023	-2591	8023	2591	3prime_fragment	FALSE	canonical	1	2	junction_3	34.8173807171074	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAATGTAAACGCAAA	NA	False	NA	NA	False	NA	NA	NA	147224517	147267627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147224577_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.53	chr4	+	3959	6	NNC	ENSMUSG00000067916.10	novel	234	4	NA	NA	-1852	1177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.0314144732981	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATTATGTCCATCCGC	2730	False	NA	NA	False	NA	NA	NA	147233098	147266213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147234938_147235032_147249797_147249867_147260303_147260362_147261203_147261331_147262781
ES.25044.54	chr4	+	3806	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1820	1172	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATGCAATTATGTCCA	2762	False	NA	NA	False	NA	NA	NA	147233130	147266208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.55	chr4	+	3840	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1820	1183	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	35.8503835404867	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	2762	False	NA	NA	False	NA	NA	NA	147233130	147266219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249867_147260303_147260362_147261203_147261331_147262781
ES.25044.56	chr4	+	5039	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1820	2405	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGTGAGATGGCTCAG	2762	False	NA	NA	False	NA	NA	NA	147233130	147267441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.57	chr4	+	3860	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	1185	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	35.7840746701658	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCATCCGCTACGGCTC	2765	False	NA	NA	False	NA	NA	NA	147233133	147266221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233323_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.58	chr4	+	2634	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	2765	False	NA	NA	False	AATAAA	-23	NA	147233133	147265039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.59	chr4	+	3674	4	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	1170	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.40870359029762	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTATGCAATTATGTC	2765	False	NA	NA	False	NA	NA	NA	147233133	147266206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147262781
ES.25044.60	chr4	+	4025	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1817	1371	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	35.8503835404867	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTCATGATATTCCC	2765	False	NA	NA	False	NA	NA	NA	147233133	147266407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249867_147260303_147260362_147261203_147261331_147262781
ES.25044.61	chr4	+	3391	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1815	762	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTTATTGTGTTTG	2767	False	NA	NA	False	NA	NA	NA	147233135	147265798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.62	chr4	+	2497	5	NNC	ENSMUSG00000067916.10	novel	234	4	NA	NA	-1811	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.2581690623062	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTACTTGTTCACCC	2771	False	NA	NA	False	AAGAAA	-38	NA	147233139	147264861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147234938_147235032_147260303_147260362_147261203_147261331_147262781
ES.25044.63	chr4	+	3762	4	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1810	1184	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	39.2626483512709	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCATCCGCTACGGCT	2772	False	NA	NA	False	NA	NA	NA	147233140	147266220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147260303_147260362_147261203_147261331_147262781
ES.25044.64	chr4	+	3939	6	NNC	ENSMUSG00000067916.10	novel	234	4	NA	NA	-1810	1178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2718543414272	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTATGTCCATCCGCT	2772	False	NA	NA	False	NA	NA	NA	147233140	147266214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233323_147234938_147235032_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.65	chr4	+	4653	5	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1810	2029	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	34.022051672408	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGGATGCCAGTGCCT	2772	False	NA	NA	False	NA	NA	NA	147233140	147267065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.66	chr4	+	5128	3	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	-1799	1719	intron_retention	FALSE	canonical	3	10	junction_1	39.5	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCTCGATGTAACATC	2783	False	NA	NA	False	AATAAA	-10	NA	147233151	147266755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147260303_147261331_147262781
ES.25044.67	chr4	+	2431	6	NNC	ENSMUSG00000067916.10	novel	234	4	NA	NA	-1704	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2718543414272	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACCTTTTTACTTGTT	2878	False	NA	NA	False	AAGAAA	-33	NA	147233246	147264856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147233279_147234938_147235032_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ES.25044.68	chr4	+	4554	2	NIC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	24084	3	intron_retention	FALSE	canonical	3	89	junction_1	0	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATGAGCCAATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	147259034	147265039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147261331_147262781
ES.25044.69	chr4	+	4647	3	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	42784	-1182	24328	1182	3prime_fragment	FALSE	canonical	1	2	junction_1	43.5	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCCATCCGCTACGG	NA	False	NA	NA	False	NA	NA	NA	147259278	147266218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147260362_147261203_147261331_147262781
ES.25044.7	chr4	+	737	5	Fusion	ENSMUSG00000086147.3_ENSMUSG00000067919.9	novel	2295	5	NA	NA	-32	-3278	multi-exon	FALSE	canonical	3	25	junction_2	225.088316000631	418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGGTCTTCTATCATT	NA	False	NA	NA	False	TATAAA	-17	NA	147056400	147141973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147058404_147058498_147136962_147137048_147140055_147140183_147141715
ES.25044.70	chr4	+	5185	2	NIC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	24633	1183	intron_retention	FALSE	canonical	3	89	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	147259583	147266219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_147261331_147262781
ES.25044.71	chr4	+	3426	1	Genic_Genomic	ENSMUSG00000067916.10	novel	NA	NA	NA	NA	27830	1170	mono-exon	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTATGCAATTATGTC	NA	False	NA	NA	False	NA	NA	NA	147262780	147266206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147262800_147266200
ES.25044.72	chr4	+	209	1	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	46305	2028	27849	1779	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	147262799	147263008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_147262800_147263000
ES.25044.73	chr4	+	4675	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000067916.10	novel	2813	7	NA	NA	28448	3832	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATAGTGGAAAATGTG	NA	False	NA	12	True	NA	NA	NA	147263398	147422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147263505_147417454
ES.25044.74	chr4	+	4065	3	NNC	ENSMUSG00000067916.10	novel	2813	7	NA	NA	28735	2982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGGATTGTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	147263685	147268018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147264596_147264666_147267440_147267636
ES.25044.75	chr4	+	6629	2	Fusion	ENSMUSG00000078498.6_ENSMUSG00000067916.10	novel	2813	7	NA	NA	28952	4607	multi-exon	FALSE	canonical	0	0	junction_1	0	1616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAAAGTGCCTGGTGT	NA	False	NA	13	True	NA	NA	NA	147263902	147422798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147263973_147416239
ES.25044.76	chr4	+	4894	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000067916.10	novel	2813	7	NA	NA	29213	2718	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGTTTGTAACGCTG	NA	False	NA	7	True	TTTAAA	-20	NA	147264163	147420909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147264327_147343463_147343665_147416295_147416849_147416932
ES.25044.77	chr4	+	5650	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-16979	2652	multi-exon	TRUE	non_canonical	0	0	junction_1	73.2731874562585	1483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGTTGCAAACATGG	NA	False	NA	-59	True	NA	NA	NA	147297761	147420843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147297769_147314749_147314893_147393100_147393241_147409220_147409335_147413438_147413566_147415724
ES.25044.78	chr4	+	3348	7	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-75788	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.7654801619126	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGCTTTGGTTGTT	3712	False	NA	NA	False	NA	NA	NA	147314342	147418186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147314564_147389911_147390013_147394997_147395153_147396767_147396930_147409214_147409335_147413438_147413566_147415724
ES.25044.79	chr4	+	734	6	NNC	ENSMUSG00000087207.9	novel	585	4	NA	NA	-58	813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3953265925061	835	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	4052	False	NA	NA	False	NA	NA	NA	147314682	147344608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147314886_147316807_147316901_147337753_147337859_147341252_147341380_147342850_147342967_147344518
ES.25044.8	chr4	+	585	5	Fusion	ENSMUSG00000086147.3_ENSMUSG00000078497.10	novel	2295	5	NA	NA	-21	49	multi-exon	FALSE	canonical	2	5	junction_1	85.6077537376142	2220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAGTACACCTCATAAAA	NA	False	NA	NA	False	AATATA	-15	NA	147056411	147474795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147056575_147136962_147137048_147472778_147472906_147474017_147474089_147474656
ES.25044.80	chr4	+	3100	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-52	0	multi-exon	FALSE	canonical	0	0	junction_3	204.124079912195	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4058	False	NA	NA	False	NA	NA	NA	147314688	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
ES.25044.81	chr4	+	3052	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-52	0	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4058	False	NA	NA	False	NA	NA	NA	147314688	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393241_147409220_147409335_147413438_147413566_147415724
ES.25044.82	chr4	+	7604	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-42	4619	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	1513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTCTCTTCGTGATG	4068	False	NA	25	True	NA	NA	NA	147314698	147422810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393194_147409230_147409335_147413438_147413566_147415724
ES.25044.83	chr4	+	3044	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-22	0	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4088	False	NA	NA	False	NA	NA	NA	147314718	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314915_147393100_147393241_147409220_147409335_147413438_147413566_147415724
ES.25044.84	chr4	+	5778	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-13	2922	multi-exon	FALSE	non_canonical	0	0	junction_1	76.1810708480496	1490	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTATTTTTCCAATTT	4097	False	NA	NA	False	TATAAA	-19	NA	147314727	147421113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314886_147409230_147409335_147413438_147413566_147415724
ES.25044.85	chr4	+	7628	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-11	4617	multi-exon	FALSE	non_canonical	0	0	junction_1	76.333151382607	1513	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTGTCTCTTCGTGA	4099	False	NA	23	True	NA	NA	NA	147314729	147422808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393241_147409220_147409335_147413438_147413566_147415724
ES.25044.86	chr4	+	3172	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-11	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	72.9865741078453	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTGGTTGTTTCC	4099	False	NA	NA	False	NA	NA	NA	147314729	147418189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393194_147394997_147395206_147409218_147409335_147413438_147413566_147415724
ES.25044.87	chr4	+	5041	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	2490	multi-exon	FALSE	non_canonical	0	0	junction_1	26.8700576850888	1479	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTACTCTGCTGCTCAT	4107	False	NA	NA	False	NA	NA	NA	147314737	147420681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314886_147409230_147409335_147415724_147416721_147416888
ES.25044.88	chr4	+	6642	4	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	3836	multi-exon	FALSE	non_canonical	0	0	junction_1	26.8700576850888	1506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGGAAAATGTGTTCT	4107	False	NA	16	True	NA	NA	NA	147314737	147422027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393181_147409230_147409335_147415724
ES.25044.89	chr4	+	5511	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	-3	2577	multi-exon	FALSE	canonical	0	0	junction_1	76.333151382607	1480	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAACTTTTCCTGATTTT	4107	False	NA	NA	False	NA	NA	NA	147314737	147420768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147337777_147337859_147409230_147409335_147413438_147413566_147415724
ES.25044.9	chr4	+	1995	4	NNC	ENSMUSG00000086147.3	novel	2295	5	NA	NA	-21	-4716	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_3	147.137879404168	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGACAGTATACAA	NA	False	NA	NA	False	NA	NA	NA	147056411	147070496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147056575_147058404_147058498_147067150_147067255_147068861
ES.25044.90	chr4	+	7512	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	9	4601	multi-exon	FALSE	non_canonical	0	0	junction_1	73.0941174103635	1513	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGGAAAAGTGCC	4119	False	NA	7	True	NA	NA	NA	147314749	147422792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314886_147316823_147316901_147409230_147409335_147413438_147413566_147415724
ES.25044.91	chr4	+	7260	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	15	4601	multi-exon	TRUE	non_canonical	0	0	junction_1	76.333151382607	1513	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTTGGAAAAGTGCC	4125	False	NA	7	True	NA	NA	NA	147314755	147422792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314886_147409230_147409335_147413438_147413566_147415724_147416693_147416861
ES.25044.92	chr4	+	2899	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	22	0	multi-exon	FALSE	canonical	0	0	junction_3	230.538906694727	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4132	False	NA	NA	False	NA	NA	NA	147314762	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147415724
ES.25044.93	chr4	+	3061	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	23	0	multi-exon	FALSE	non_canonical	0	0	junction_1	72.8461392250818	1376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4133	False	NA	NA	False	NA	NA	NA	147314763	147418191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147314893_147393100_147393194_147400358_147400453_147409183_147409335_147413438_147413566_147415724
ES.25044.94	chr4	+	527	6	NNC	ENSMUSG00000087207.9	novel	585	4	NA	NA	23	819	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	216.01981390604	835	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	4133	False	NA	NA	False	NA	NA	NA	147314763	147344614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147314893_147316807_147316901_147336485_147336521_147337800_147337859_147342850_147342967_147344518
ES.25044.95	chr4	+	6732	5	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	2065	3834	multi-exon	FALSE	canonical	0	0	junction_2	69.9477483554689	1506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAGTGGAAAATGTGTT	6175	False	NA	14	True	NA	NA	NA	147316805	147422025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
ES.25044.96	chr4	+	5485	5	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71330	2580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.0519243504178	1478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTGATTTTTTT	8170	False	NA	NA	False	NA	NA	NA	147318800	147420771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147400358_147400439_147409230_147409335_147413438_147413566_147415724
ES.25044.97	chr4	+	6568	6	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71330	3832	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.793035873962	1504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATAGTGGAAAATGTG	8170	False	NA	12	True	NA	NA	NA	147318800	147422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147400358_147400439_147409230_147409335_147413438_147413566_147415724_147416715_147416883
ES.25044.98	chr4	+	7431	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71330	4606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1810708480496	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAAGTGCCTGGTG	8170	False	NA	12	True	NA	NA	NA	147318800	147422797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147409230_147409335_147413438_147413566_147415724
ES.25044.99	chr4	+	3657	4	NNC	ENSMUSG00000078498.6	novel	2800	4	NA	NA	-71329	833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1810708480496	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATGCTGACTGT	8171	False	NA	NA	False	NA	NA	NA	147318801	147419024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_147318928_147409230_147409335_147413438_147413566_147415724
ES.25045.1	chr4	-	166	1	Intergenic	novelGene_20884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	147227543	147227377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147227400_147227500
ES.25046.1	chr4	-	177	1	Intergenic	novelGene_20885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGAAAAATATTCT	NA	False	NA	NA	False	NA	NA	NA	147298263	147298086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147298100_147298300
ES.25047.1	chr4	-	224	1	Intergenic	novelGene_20886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTATTTTTAGATTAA	NA	False	NA	NA	False	NA	NA	NA	147300840	147300616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147300600_147300800
ES.25048.1	chr4	-	179	1	Intergenic	novelGene_20887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147319215	147319036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147319000_147319200
ES.25049.1	chr4	-	4514	2	Intergenic	novelGene_20888	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGATTGGATTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	147420681	147343454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147343622_147416334
ES.25049.2	chr4	-	195	1	Intergenic	novelGene_20891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTATTTACATTAACACA	NA	False	NA	NA	False	NA	NA	NA	147385717	147385522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147385500_147385700
ES.25049.3	chr4	-	5217	3	Antisense	novelGene_ENSMUSG00000078498.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGACTTCCTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	147420681	147394990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_147395144_147409227_147409332_147415721
ES.2505.1	chr10	+	6398	1	Antisense	novelGene_ENSMUSG00000049420.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAAACTGTTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	25905605	25912003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_25905600_25912000
ES.25050.1	chr4	-	5791	1	Intergenic	novelGene_20905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACAAAATTACAATAC	NA	False	NA	NA	False	NA	NA	NA	147550275	147544484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147544500_147550300
ES.25050.2	chr4	-	6047	1	Intergenic	novelGene_20906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGAACCTGTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	147550786	147544739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147544700_147550800
ES.25051.1	chr4	-	6115	1	Intergenic	novelGene_20907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAGCACCAGCTAATAG	NA	False	NA	NA	False	NA	NA	NA	147571747	147565632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147565600_147571700
ES.25052.1	chr4	-	5795	2	Intergenic	novelGene_20908	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCCTTTTTTATTCAGA	6535	False	NA	NA	False	NA	NA	NA	147645307	147594974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147595122_147639659
ES.25052.2	chr4	-	3930	1	FSM	ENSMUSG00000081301.2	ENSMUST00000118377.2	400	1	108	-3638	108	3638	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACACACAAGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	147605216	147601286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147601300_147605200
ES.25052.3	chr4	-	176	1	Intergenic	novelGene_20913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTGAATTTAAG	NA	False	NA	NA	False	NA	NA	NA	147624765	147624589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147624600_147624800
ES.25053.1	chr4	-	2920	1	Antisense	novelGene_ENSMUSG00000065999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTCGTAATTGAAAGGT	NA	False	NA	NA	False	AATATA	-37	NA	147663730	147660810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_147660800_147663700
ES.25054.1	chr4	-	3053	1	Antisense	novelGene_ENSMUSG00000065999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTCATACCTACAATATA	NA	False	NA	NA	False	NA	NA	NA	147671930	147668877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_147668900_147671900
ES.25055.1	chr4	+	4563	2	Antisense	novelGene_ENSMUSG00000062518.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAAATTTCAGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	147719912	147783739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147724298_147783561
ES.25056.1	chr4	-	3328	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-5	722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	233.592058940367	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTACAGAATGCTACTA	NA	False	NA	NA	False	NA	NA	NA	147726958	147695671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702962_147725321_147725463_147726820
ES.25056.11	chr4	-	2691	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	226.990748710162	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726968	147696393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726820
ES.25056.12	chr4	-	5646	4	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_2	210.220519138039	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726988	147696393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147702962_147725321_147725463_147726820
ES.25056.14	chr4	-	2640	6	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2594	5	NA	NA	-96	0	multi-exon	TRUE	non_canonical	0	0	junction_5	209.665829357099	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787106	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791_147726879_147786966
ES.25056.15	chr4	-	2615	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	178.0028089666	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147727009	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699877_147702873_147702956_147725368_147725463_147726820
ES.25056.16	chr4	-	2541	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	182.225649950823	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726991	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699821_147702873_147702956_147725368_147725463_147726820
ES.25056.17	chr4	-	5650	4	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	210.003703671044	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726971	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147702956_147725321_147725463_147726791
ES.25056.18	chr4	-	5463	4	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-55883	0	intron_retention	FALSE	canonical	3	26	junction_3	177.315161976258	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147782853	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147702956_147725368_147725463_147782813
ES.25056.19	chr4	-	2732	7	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2594	5	NA	NA	-55	0	multi-exon	TRUE	non_canonical	0	0	junction_6	219.398736449314	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787065	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147723554_147723688_147725368_147725463_147726791_147726914_147787001
ES.25056.2	chr4	-	2897	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	23	-362	11	360	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTACTAGGTTAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	147726942	147696033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ES.25056.20	chr4	-	2700	5	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2558	5	NA	NA	-103	0	multi-exon	FALSE	non_canonical	0	0	junction_3	235.506369340619	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787113	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702962_147725321_147725463_147786879
ES.25056.21	chr4	-	2619	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	172.821989341634	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726958	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147700636_147700676_147702873_147702956_147725368_147725463_147726791
ES.25056.22	chr4	-	2436	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-55866	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	193.526483975708	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147782836	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147782813
ES.25056.23	chr4	-	5590	4	NIC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	23	junction_3	178.44513629311	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726987	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147698506_147699736_147702956_147725368_147725463_147726820
ES.25056.24	chr4	-	2722	6	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2558	5	NA	NA	-20	0	multi-exon	FALSE	canonical	0	0	junction_4	224.548792025252	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787030	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706577_147725343_147725463_147786908
ES.25056.25	chr4	-	2615	6	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2558	5	NA	NA	-101	0	multi-exon	TRUE	canonical	0	0	junction_5	209.867196102678	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787111	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820_147726908_147786996
ES.25056.26	chr4	-	2587	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	179.762343108895	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726983	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699846_147702873_147702956_147725368_147725463_147726791
ES.25056.27	chr4	-	4613	2	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	24751	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	453	False	NA	-7	True	AATAAA	-16	NA	147702202	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698543_147699736
ES.25056.28	chr4	-	2593	6	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2594	5	NA	NA	-36	0	multi-exon	TRUE	non_canonical	0	0	junction_5	173.625574153118	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787046	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147699877_147702873_147702956_147725368_147725463_147726791_147726841_147786928
ES.25056.29	chr4	-	5651	4	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2558	5	NA	NA	-97	0	intron_retention	FALSE	canonical	2	15	junction_3	181.477883562219	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147787107	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147702956_147725368_147725463_147786879
ES.25056.3	chr4	-	2444	2	ISM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	27152	-257	27140	255	3prime_fragment	FALSE	canonical	3	457	junction_1	0	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAGTGTTTAGCATTAC	2842	False	NA	NA	False	NA	NA	NA	147699813	147696138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_147698506_147699736
ES.25056.31	chr4	-	2684	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	233.355281705814	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147727009	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702962_147725321_147725463_147726791
ES.25056.32	chr4	-	2617	6	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-9355	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	210.829409713161	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	2480	False	NA	-7	True	AATAAA	-16	NA	147736325	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147735985_147736078_147736213
ES.25056.33	chr4	-	754	6	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	208.977127935092	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147727015	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147696547_147698400_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ES.25056.34	chr4	-	2588	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	3258	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	236.476743042524	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147723695	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147723554
ES.25056.35	chr4	-	2675	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	191.61484806768	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726987	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699877_147702873_147702962_147725321_147725463_147726791
ES.25056.36	chr4	-	5647	4	NIC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-45	0	intron_retention	FALSE	canonical	3	24	junction_3	178.068026951	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147727015	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147698506_147699736_147702956_147725368_147725463_147726791
ES.25056.37	chr4	-	2493	4	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	3277	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	225.71712877454	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147723676	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702979_147723525
ES.25056.38	chr4	-	5507	3	NIC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-28	0	intron_retention	FALSE	canonical	3	8	junction_2	224.5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726998	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147698506_147699736_147702956_147726820
ES.25056.40	chr4	-	2640	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	198.757861479741	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726988	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726761
ES.25056.41	chr4	-	2420	4	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.0108550060789	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726950	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147702869_147702956_147725368_147725463_147726820
ES.25056.42	chr4	-	5353	6	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2558	5	NA	NA	27	0	intron_retention	TRUE	non_canonical	0	0	junction_1	182.70041050857	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147786983	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147697432_147697683_147698506_147699736_147702959_147777544_147777621_147784759_147784853_147786879
ES.25056.43	chr4	-	5335	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	54	0	intron_retention	TRUE	non_canonical	0	0	junction_1	194.669431344523	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726899	147696395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147697425_147697673_147698506_147699736_147702962_147725321_147725463_147726791
ES.25056.44	chr4	-	2592	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	179.968573645512	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGACTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	147727018	147696396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699846_147702873_147702956_147725368_147725463_147726820
ES.25056.45	chr4	-	3336	5	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.64069186617	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGACTTGCTTGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	147726983	147696396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726059
ES.25056.46	chr4	-	2682	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.538847051858	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTGACTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	147726969	147696397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147721837_147721931_147725368_147725463_147726791
ES.25056.48	chr4	-	2489	4	NIC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	221.956452185258	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTGACTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	147726992	147696397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147698506_147699736_147699864_147702873_147702956_147726820
ES.25056.49	chr4	-	2557	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	193.006476575269	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTTGACTTGCTTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	147726931	147696397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699846_147702873_147702962_147725321_147725463_147726820
ES.25056.5	chr4	-	2696	5	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	-74	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	233.592058940367	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTTGTTTTTAGTTT	NA	False	NA	-1	True	AATAAA	-22	NA	147727044	147696389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702962_147725321_147725463_147726820
ES.25056.50	chr4	-	733	5	FSM	ENSMUSG00000066000.13	ENSMUST00000133006.2	574	5	-38	-121	-21	121	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGTCTTCTACCATTA	NA	False	NA	NA	False	TATAAA	-18	NA	147726991	147698246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ES.25056.51	chr4	-	1801	1	Intergenic	novelGene_20916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	465	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	147717178	147715377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147715400_147717200
ES.25056.52	chr4	-	176	1	Intergenic	novelGene_20917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCTGCATAG	1435	False	NA	NA	False	NA	NA	NA	147737370	147737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147737200_147737400
ES.25056.53	chr4	-	180	1	Intergenic	novelGene_20918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	147741750	147741570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147741600_147741800
ES.25056.54	chr4	-	3306	1	Genic_Genomic	ENSMUSG00000086130.2_ENSMUSG00000062518.8	novel	NA	NA	NA	NA	-3151	-2182	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAACCTGGACACAGCC	NA	False	NA	NA	False	AAAAAG	-15	NA	147758462	147755156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_147755200_147758500
ES.25056.55	chr4	-	2951	1	Genic_Genomic	ENSMUSG00000062518.8	novel	NA	NA	NA	NA	28613	2512	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTTGGCTCTATTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	147758397	147755446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_147755400_147758400
ES.25056.56	chr4	-	184	1	Intergenic	novelGene_20919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATGCTGACCGT	NA	False	NA	NA	False	NA	NA	NA	147757312	147757128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_147757100_147757300
ES.25056.57	chr4	-	6705	5	NNC	ENSMUSG00000062518.8	novel	2885	4	NA	NA	-69	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	150.007499812509	153	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	147787079	147757961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147758799_147758882_147759520_147759604_147760511_147762673_147766828_147786908
ES.25056.6	chr4	-	5608	4	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	11	2	intron_retention	FALSE	canonical	2	11	junction_3	183.004553677406	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGCTTGTTTTTAGT	NA	False	NA	-3	True	AATAAA	-20	NA	147726942	147696391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147702956_147725368_147725463_147726761
ES.25056.7	chr4	-	4553	6	NNC	ENSMUSG00000066000.13	novel	2558	5	NA	NA	104	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	230.518892935048	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGCTTGTTTTTAG	NA	False	NA	-4	True	AATAAA	-19	NA	147726849	147696392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147715404_147717466_147725321_147725463_147726820
ES.25056.8	chr4	-	5628	4	Fusion	ENSMUSG00000062518.8_ENSMUSG00000066000.13	novel	2594	5	NA	NA	-101	0	intron_retention	FALSE	canonical	3	53	junction_3	167.339973307834	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147787111	147696393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147698506_147699736_147702956_147725368_147725463_147786908
ES.25056.9	chr4	-	2761	7	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	-60127	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	220.102564475948	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147787097	147696393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726791_147726952_147787039
ES.25057.1	chr4	+	237	1	Intergenic	novelGene_20920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCCATAAAACATATT	NA	False	NA	NA	False	NA	NA	NA	147791369	147791606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147791400_147791600
ES.25058.1	chr4	-	5181	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	-592	-1639	-592	1639	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGCCACTGTGAAAATT	NA	False	NA	NA	False	NA	NA	NA	147823475	147818294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147818300_147823500
ES.25058.2	chr4	-	3941	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	-602	-389	-602	389	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGTTGTTAGAGTGAAA	NA	False	NA	NA	False	GATAAA	-15	NA	147823485	147819544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147819500_147823500
ES.25058.3	chr4	-	3922	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	-686	-286	-686	286	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGGGATCAAGGTGACC	NA	False	NA	NA	False	AAAAAG	-25	NA	147823569	147819647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147819600_147823600
ES.25059.1	chr4	-	5477	1	FSM	ENSMUSG00000083642.2	ENSMUST00000118892.2	745	1	-640	-4092	-640	4092	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGGTTGTCCTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	147831658	147826181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147826200_147831700
ES.25059.2	chr4	-	4270	2	Genic_Genomic	ENSMUSG00000083642.2	novel	745	1	NA	NA	147	4089	multi-exon	FALSE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGCGGTTGTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	147830871	147826184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_147829363_147829779
ES.2506.1	chr10	-	4057	4	NNC	ENSMUSG00000049420.10	novel	232	3	NA	NA	87	-62	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTGTGTTCTTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	25954774	25867145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_25870284_25913525_25913595_25926275_25926387_25954035
ES.25060.1	chr4	+	3902	1	Antisense	novelGene_ENSMUSG00000078495.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCAGCTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	147858910	147862812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147858900_147862800
ES.25061.1	chr4	+	10397	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	147867803	147878278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147877594_147877671
ES.25061.2	chr4	+	3625	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAAAAAGAATA	5740	False	NA	NA	False	NA	NA	NA	147874603	147878297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147877628_147877696
ES.25061.3	chr4	+	2977	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAAAAAGAATA	6382	False	NA	NA	False	NA	NA	NA	147875245	147878297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147877585_147877659
ES.25061.4	chr4	+	2973	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAAAAAGAATA	6382	False	NA	NA	False	NA	NA	NA	147875245	147878297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147877628_147877706
ES.25061.5	chr4	+	2978	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAAAAAAAGAATA	6382	False	NA	NA	False	NA	NA	NA	147875245	147878297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147877603_147877676
ES.25062.1	chr4	+	205	1	Intergenic	novelGene_20921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTCTTAGTCATCAGG	9523	False	NA	NA	False	NA	NA	NA	147878386	147878591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147878400_147878600
ES.25063.1	chr4	+	220	2	Antisense	novelGene_ENSMUSG00000093594.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAAATCTGCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	147891906	147900790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_147891958_147900621
ES.25063.2	chr4	+	196	1	Intergenic	novelGene_20922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	147898840	147899036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_147898800_147899000
ES.25064.1	chr4	-	7377	2	NNC	ENSMUSG00000078495.11	novel	2405	4	NA	NA	20255	6001	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTCTTTTAGTTGCCTT	8356	False	NA	NA	False	TATAAA	-15	NA	147840035	147832429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147835891_147836119
ES.25064.11	chr4	-	2931	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.146692406689	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	9506	False	NA	NA	False	NA	NA	NA	147894262	147838431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845799_147860095_147860286_147891546_147891641_147894124
ES.25064.12	chr4	-	3048	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	107.13430823037	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	9521	False	NA	NA	False	NA	NA	NA	147894247	147838431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147868857_147869021_147891542_147891641_147893953
ES.25064.13	chr4	-	2966	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	297	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.911926369325	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGCTTTGGTTGTTTTC	9820	False	NA	NA	False	NA	NA	NA	147893948	147838431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845799_147860095_147860286_147891546_147891641_147893775
ES.25064.14	chr4	-	3264	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.051839055244	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	9478	False	NA	NA	False	NA	NA	NA	147894290	147838432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845799_147860095_147860286_147891546_147891641_147893153_147893289_147893953
ES.25064.15	chr4	-	3181	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.051839055244	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	9525	False	NA	NA	False	NA	NA	NA	147894243	147838432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845801_147860133_147860286_147891546_147891641_147893153_147893289_147893953
ES.25064.16	chr4	-	3291	8	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.6749820206471	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCTTTGGTTGTTTT	9506	False	NA	NA	False	NA	NA	NA	147894262	147838432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147868857_147868955_147889671_147889825_147891535_147891641_147893153_147893289_147893953
ES.25064.17	chr4	-	2852	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	145	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.849621037466	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTGCTTTGGTTGTTT	9668	False	NA	NA	False	NA	NA	NA	147894100	147838433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147889671_147889792_147891499_147891641_147893953
ES.25064.19	chr4	-	3064	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.051839055244	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	9506	False	NA	NA	False	NA	NA	NA	147894262	147838434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845800_147860095_147860286_147891546_147891641_147893153_147893289_147894124
ES.25064.2	chr4	-	2477	4	NIC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	2672	3	combination_of_known_splicesites	FALSE	canonical	2	14	junction_3	99.9544340631714	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTTGTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	147891573	147838427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147891546
ES.25064.20	chr4	-	2943	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-35	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.162887242101	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9488	False	NA	NA	False	NA	NA	NA	147894280	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845816_147891546_147891641_147893953
ES.25064.21	chr4	-	2550	4	Fusion	ENSMUSG00000078495.11_ENSMUSG00000093594.2	novel	2405	4	NA	NA	2638	-5	multi-exon	FALSE	canonical	3	29	junction_3	93.09970760188	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	147891607	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147840693_147842158_147842286_147845677_147845783_147891546
ES.25064.22	chr4	-	2891	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.146692406689	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9506	False	NA	NA	False	NA	NA	NA	147894262	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845801_147860133_147860286_147891546_147891641_147894124
ES.25064.23	chr4	-	3081	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-73	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.327032338759	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9450	False	NA	NA	False	NA	NA	NA	147894318	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147889671_147889780_147891546_147891713_147893953
ES.25064.24	chr4	-	3213	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-52	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	106.911926369325	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9471	False	NA	NA	False	NA	NA	NA	147894297	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147889671_147889780_147891546_147891641_147893775
ES.25064.25	chr4	-	3052	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.849621037466	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9513	False	NA	NA	False	NA	NA	NA	147894255	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147889671_147889792_147891499_147891641_147893953
ES.25064.26	chr4	-	3151	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.9112733716435	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9495	False	NA	NA	False	NA	NA	NA	147894273	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147880114_147880185_147891546_147891641_147893775
ES.25064.27	chr4	-	2635	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	94	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.9014935294369	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9617	False	NA	NA	False	NA	NA	NA	147894151	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147891521_147891641_147894124
ES.25064.28	chr4	-	3236	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-52	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	103.345698184943	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGTTTGCTTTGGTTGT	9471	False	NA	NA	False	NA	NA	NA	147894297	147838435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845736_147880114_147880188_147889674_147889780_147891546_147891641_147893775
ES.25064.29	chr4	-	3193	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	103.845103666738	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAAGTTTGCTTTGGTT	9505	False	NA	NA	False	NA	NA	NA	147894263	147838437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147868857_147869021_147891542_147891641_147893153_147893289_147893953
ES.25064.3	chr4	-	3174	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	97.770343151694	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGTTGTTTTCAAT	9506	False	NA	NA	False	NA	NA	NA	147894262	147838428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147868857_147868955_147891546_147891641_147893775
ES.25064.30	chr4	-	2262	5	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-26	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	111.895040104555	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAACAAGTTTGCTTT	8347	False	NA	NA	False	NA	NA	NA	147860316	147838441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147839600_147839935_147840693_147842158_147842286_147845677_147845736_147860154
ES.25064.31	chr4	-	198	1	ISM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	53576	2041	19621	-1816	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATGACTCTGTAAA	7722	False	NA	NA	False	AAAAAG	-32	NA	147840669	147840471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_147840500_147840700
ES.25064.32	chr4	-	5673	6	Fusion	ENSMUSG00000080059.5_ENSMUSG00000059423.14	novel	509	5	NA	NA	-51	43714	multi-exon	FALSE	non_canonical	0	0	junction_1	23.549097647256	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATTTCTCTTGTTATC	3890	False	NA	NA	False	NA	NA	NA	147932874	147862519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147862647_147906010_147909382_147909556_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.34	chr4	-	2235	3	NNC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	24	-428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGTGTGCGTCTGTTT	9495	False	NA	-3	True	NA	NA	NA	147894273	147867203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147869021_147891542_147891641_147893953
ES.25064.35	chr4	-	7196	2	NNC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	19637	-429	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTGCGTCTGTT	NA	False	NA	-4	True	NA	NA	NA	147874660	147867204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147868955_147869214
ES.25064.36	chr4	-	6045	1	NIC	ENSMUSG00000093594.2	novel	2516	4	NA	NA	21044	-433	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTCTCCTGTGTGCGTC	NA	False	NA	-8	True	NA	NA	NA	147873253	147867208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147867200_147873300
ES.25064.37	chr4	-	5372	5	Fusion	ENSMUSG00000080059.5_ENSMUSG00000059423.14	novel	509	5	NA	NA	-37	63	multi-exon	FALSE	non_canonical	0	0	junction_1	21.0876148485314	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTTTTTATTTTTT	3904	False	NA	NA	False	AATAAA	-40	NA	147932860	147906170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_147909382_147909556_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.38	chr4	-	4132	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0876148485314	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGCGTCAGTGTCCTC	3871	False	NA	NA	False	ATTAAA	-14	NA	147932893	147907443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909382_147909556_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.39	chr4	-	3841	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-26	-248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0876148485314	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGGATGTCTCTACT	3915	False	NA	NA	False	NA	NA	NA	147932849	147907690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909382_147909556_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.4	chr4	-	7567	2	ISM	ENSMUSG00000078495.11	ENSMUST00000122309.2	2405	4	12828	-226	12828	1	intron_retention	FALSE	canonical	3	249	junction_1	0	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTTCAA	929	False	NA	NA	False	NA	NA	NA	147847462	147838429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_147840693_147842158
ES.25064.40	chr4	-	2974	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-50	-1139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0876148485314	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTTCTTTTGGGCTGTG	3891	False	NA	NA	False	NA	NA	NA	147932873	147908581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909382_147909556_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.41	chr4	-	2947	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-28	-1142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0876148485314	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGGCTTCTTTTGGGCT	3913	False	NA	NA	False	NA	NA	NA	147932851	147908584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909386_147909562_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.42	chr4	-	3009	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-61	-1143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9949994999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGGCTTCTTTTGGGC	3880	False	NA	NA	False	NA	NA	NA	147932884	147908585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909382_147909556_147911432_147912866_147912928_147913126_147913254_147932734
ES.25064.43	chr4	-	2969	5	NNC	ENSMUSG00000059423.14	novel	509	5	NA	NA	-50	-1143	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.0876148485314	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGGCTTCTTTTGGGC	3891	False	NA	NA	False	NA	NA	NA	147932873	147908585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147909374_147909549_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.44	chr4	-	526	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	-50	3762	-50	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGTAATCAGTGTGG	3891	False	NA	NA	False	NA	NA	NA	147932873	147911204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
ES.25064.5	chr4	-	6847	1	NIC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	15013	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	3114	False	NA	NA	False	NA	NA	NA	147845277	147838430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147838400_147845300
ES.25064.6	chr4	-	3024	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.849621037466	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9487	False	NA	NA	False	NA	NA	NA	147894281	147838430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147889671_147889780_147891546_147891641_147893953
ES.25064.7	chr4	-	6069	4	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	381	0	intron_retention	FALSE	canonical	3	16	junction_3	106.904942199445	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9904	False	NA	NA	False	NA	NA	NA	147893864	147838430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147845783_147891546_147891641_147893775
ES.25064.8	chr4	-	3104	6	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.849621037466	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9505	False	NA	NA	False	NA	NA	NA	147894263	147838430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845799_147860095_147860286_147891546_147891641_147893953
ES.25064.9	chr4	-	3167	7	NNC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.051839055244	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9500	False	NA	NA	False	NA	NA	NA	147894268	147838430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147840693_147842158_147842286_147845677_147845783_147859985_147860286_147891546_147891641_147893153_147893289_147894124
ES.25065.1	chr4	-	1834	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	19	junction_4	85.7195236494807	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAAGCCTCTCTTTTTTT	NA	False	NA	0	True	AATAAA	-28	NA	147952978	147945235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.10	chr4	-	2031	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	219	junction_7	24.6915667665654	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147953001	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.11	chr4	-	1839	9	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	28	junction_1	78.0940938867979	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952959	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.12	chr4	-	1952	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	-44	1	-20	-1	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147953000	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.13	chr4	-	2154	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	2	junction_10	97.9021960938569	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952959	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525
ES.25065.14	chr4	-	1806	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	55	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	100.893012642105	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147953068	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952525_147952641_147952825
ES.25065.15	chr4	-	1754	8	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	19	junction_4	107.346853418139	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952983	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.17	chr4	-	1481	9	NIC	ENSMUSG00000029022.19	novel	1813	10	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	80.2534072485399	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952967	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.18	chr4	-	1873	9	NNC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_7	87.4113836980058	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952991	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950402_147950691_147950877_147952825
ES.25065.19	chr4	-	1503	9	NIC	ENSMUSG00000029022.19	novel	1813	10	NA	NA	58	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	87.5263353225759	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147953065	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147952825
ES.25065.2	chr4	-	1931	9	NNC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-20	0	intron_retention	FALSE	canonical	2	11	junction_8	83.8581391398593	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTCTCCATGTAAGCC	NA	False	NA	-11	True	AATAAA	-17	NA	147953000	147945246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952848
ES.25065.20	chr4	-	1531	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952980	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.21	chr4	-	1748	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_7	115.291467372827	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCCTGTCTCCATGTA	NA	False	NA	-15	True	AATAAA	-13	NA	147952959	147945250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952877
ES.25065.3	chr4	-	1897	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	96.0689856301189	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTCTCCATGTAAGCC	NA	False	NA	-11	True	AATAAA	-17	NA	147953000	147945246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952825
ES.25065.4	chr4	-	1854	9	NNC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1	junction_7	107.542942004578	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952991	147945247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950709_147950877_147952825
ES.25065.5	chr4	-	4042	7	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	219	junction_6	26.5622957508487	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952959	147945247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.7	chr4	-	1691	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	108	14	55	-1	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147953068	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.8	chr4	-	4303	6	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	219	junction_5	28.9648062310108	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952953	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945949_147946702_147946800_147946894_147949728_147950111_147950472_147950691_147950877_147952825
ES.25065.9	chr4	-	1425	9	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	100.660242275687	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	False	NA	-13	True	AATAAA	-15	NA	147952983	147945248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ES.25066.1	chr4	+	2479	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-138	1937	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGGTTAAATCTGGGC	NA	False	NA	NA	False	NA	NA	NA	147953297	147956752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147953925_147954900
ES.25066.2	chr4	+	2882	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-124	1925	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAAAAACCTGTTGG	NA	False	NA	NA	False	NA	NA	NA	147953311	147956740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147954824_147955370
ES.25066.3	chr4	+	2880	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-124	1916	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACACACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147953311	147956731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147954835_147955374
ES.25066.4	chr4	+	1056	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-123	529	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTGGTGATAACC	NA	False	NA	NA	False	NA	NA	NA	147953312	147955344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147953925_147954900
ES.25066.5	chr4	+	2313	2	Genic_Genomic	ENSMUSG00000070583.2	novel	1380	1	NA	NA	-123	1786	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGGTCCAAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	147953312	147956601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_147953925_147954900
ES.25067.1	chr4	-	6793	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-10	-2542	1	2542	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGTGGCCTCCGAG	NA	False	NA	NA	False	NA	NA	NA	147989154	147955513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.10	chr4	-	6975	15	NIC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	-212	0	intron_retention	FALSE	canonical	2	51	junction_4	9.97982659045287	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989373	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147971771_147971871_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.14	chr4	-	4329	18	NIC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	-209	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	19.7907741254462	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGCTCTCTGCCTGC	NA	False	NA	-6	True	AATAAA	-17	NA	147989370	147958057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147982920_147983100_147987811_147987955_147989114
ES.25067.18	chr4	-	4230	19	NNC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6022957839127	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGCTCTCTGCCTG	NA	False	NA	-7	True	AATAAA	-16	NA	147989149	147958058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147959916_147961407_147961530_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.19	chr4	-	5453	17	NIC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	1	-6	intron_retention	FALSE	canonical	2	51	junction_4	10.0278907926842	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGAGCTCTCTGC	NA	False	NA	-10	True	AATAAA	-13	NA	147989160	147958061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970206_147970727_147970882_147971662_147971771_147971871_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.2	chr4	-	4477	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-231	-5	-214	5	multi-exon	FALSE	canonical	2	51	junction_4	9.87139526330723	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTGCCTGCAGTAGTC	NA	False	NA	1	True	AATAAA	-24	NA	147989375	147958050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.22	chr4	-	4267	19	NNC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.6129209111409	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGTGTGAGCTCTCTG	NA	False	NA	-11	True	AATAAA	-12	NA	147989159	147958062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970050_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.23	chr4	-	4197	18	NNC	ENSMUSG00000029020.14	novel	4241	19	NA	NA	-212	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	19.8635483646104	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTGTGTGAGCTCTCT	NA	False	NA	-12	True	AATAAA	-11	NA	147989373	147958063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983086_147989222
ES.25067.24	chr4	-	4246	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	-212	207	-195	-207	multi-exon	FALSE	canonical	2	51	junction_4	9.87139526330723	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGAGAGCCTGTATCTG	NA	False	NA	NA	False	AGTAAA	-16	NA	147989356	147958262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.3	chr4	-	4923	10	NNC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.52752085471	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989149	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147965645_147972372_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.5	chr4	-	4376	18	NIC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	-166	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_12	19.6992965289886	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989327	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971832_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ES.25067.7	chr4	-	4469	19	NIC	ENSMUSG00000029020.14	novel	4241	19	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	19.6362759537885	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989103	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147988845
ES.25067.8	chr4	-	5225	18	NNC	ENSMUSG00000029020.14	novel	4341	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	25.1420875719191	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989154	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966576_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987952_147989114
ES.25067.9	chr4	-	3566	4	NIC	ENSMUSG00000029020.14	novel	4241	19	NA	NA	5320	0	intron_retention	FALSE	canonical	2	51	junction_3	13.2748718344933	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147966660	147958055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147959916_147961407_147961543_147963170_147964555_147966473
ES.25068.1	chr4	-	3200	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	42	1	0	-1	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGGTCTGGTTATACTT	NA	False	NA	NA	False	AATAAA	-38	NA	148021182	147994210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ES.25068.2	chr4	-	2979	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	-42	306	-42	-306	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAGAGATGCCTGGGGT	NA	False	NA	-2	True	ATTAAA	-17	NA	148021266	147994515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ES.25068.4	chr4	-	2785	18	NIC	ENSMUSG00000019055.16	novel	3243	19	NA	NA	0	-307	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	23.4207786371913	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	-3	True	ATTAAA	-16	NA	148021199	147994516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ES.25068.7	chr4	-	1833	15	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	5017	5935	4958	109	internal_fragment	FALSE	canonical	3	68	junction_1	11.260595917098	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGACTGTGCCTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	148016207	148000144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083
ES.25068.8	chr4	-	1490	7	NNC	ENSMUSG00000019055.16	novel	1059	7	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.7004206070939	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGCGACGGAGTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	148021183	148012073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148012753_148012798_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ES.25069.1	chr4	+	3916	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-45	-1	-45	1	intron_retention	FALSE	canonical	3	503	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGTCTGTGTGTGGT	NA	False	NA	22	True	AATAAA	-17	NA	148025306	148031772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148026515_148029064
ES.25069.10	chr4	+	1892	2	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-10	-4452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGTAGACCAGGCTGG	NA	False	NA	NA	False	AAAACA	-18	NA	148025341	148027319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026822_148026907
ES.25069.11	chr4	+	2645	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.223262776313	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025346	148031771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148025447_148025537_148026515_148029064_148029919_148031057
ES.25069.12	chr4	+	2850	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.886487187458	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025358	148031771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026515_148029064_148029919_148030448_148030575_148031057
ES.25069.14	chr4	+	5082	3	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025364	148031771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148027222_148027407_148029919_148031057
ES.25069.17	chr4	+	2810	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	85	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	232.425376315831	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTCTGTGTGTGGTT	NA	False	NA	23	True	AATAAA	-18	NA	148025436	148031773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026515_148029064_148029919_148030412_148030575_148031057
ES.25069.2	chr4	+	2772	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-38	-3	-38	3	multi-exon	FALSE	canonical	3	503	junction_1	12.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTCTGTGTGTGGTTA	NA	False	NA	24	True	AATAAA	-19	NA	148025313	148031774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148026515_148029064_148029919_148031057
ES.25069.3	chr4	+	2667	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.223262776313	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGTCTGTGTGTGGT	NA	False	NA	22	True	AATAAA	-17	NA	148025318	148031772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026154_148026251_148026515_148029064_148029919_148031057
ES.25069.4	chr4	+	2669	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.223262776313	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTACTGGTCTGTGTGT	NA	False	NA	19	True	AATAAA	-14	NA	148025331	148031769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148025458_148025537_148026515_148029064_148029919_148031057
ES.25069.5	chr4	+	2359	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	-20	392	-20	-392	multi-exon	FALSE	canonical	3	503	junction_1	12.5	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAATTGTGTTCTTTTCC	NA	False	NA	NA	False	AATAGA	-23	NA	148025331	148031379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148026515_148029064_148029919_148031057
ES.25069.6	chr4	+	5215	3	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025331	148031771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026822_148026907_148029919_148031057
ES.25069.7	chr4	+	2863	3	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	251.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025337	148031771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026515_148029064_148029919_148030939
ES.25069.8	chr4	+	2633	4	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	243.223262776313	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTACTGGTCTGTGTGT	NA	False	NA	19	True	AATAAA	-14	NA	148025338	148031769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026515_148029064_148029421_148029529_148029919_148031057
ES.25069.9	chr4	+	3403	3	NNC	ENSMUSG00000044496.7	novel	2731	3	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	244.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTCTGTGTGTGGTTA	NA	False	NA	24	True	AATAAA	-19	NA	148025338	148031774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148026515_148029064_148030575_148031057
ES.2507.1	chr10	-	4897	25	NNC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-92413	8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	11	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGTATGATTTTTAAG	NA	False	NA	0	True	AATAAA	-23	NA	26344380	26150357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906_26252202_26334187_26334367_26344152_26344179_26344310
ES.2507.10	chr10	-	4712	23	NNC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-92431	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	9.70260253064963	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTTTTATATATGTA	NA	False	NA	-11	True	AATAAA	-12	NA	26344398	26150368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26334187_26334338_26344152
ES.2507.13	chr10	-	4857	25	NNC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-92413	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	10.9067225701501	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTTTTATATATGTA	NA	False	NA	-11	True	AATAAA	-12	NA	26344380	26150368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906_26252202_26334187_26334338_26344152_26344179_26344310
ES.2507.14	chr10	-	4434	21	NNC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	-156	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.55758860801196	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATTCTTTTTATATATG	NA	False	NA	-13	True	AATAAA	-10	NA	26250108	26150370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_26152086_26155988_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
ES.2507.15	chr10	-	3795	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	-138	915	-138	66	multi-exon	FALSE	canonical	2	5	junction_21	7.32838422979453	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGCGTATCGGGACAG	NA	False	NA	NA	False	AATAAA	-27	NA	26250090	26151283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
ES.2507.16	chr10	-	6848	1	NIC	ENSMUSG00000039089.16	novel	4500	21	NA	NA	-24400	31	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAACTGAGCTCTCAT	NA	False	NA	NA	False	NA	NA	NA	26216572	26209724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_26209700_26216600
ES.2507.17	chr10	-	3366	9	FSM	ENSMUSG00000039089.16	ENSMUST00000217699.2	3315	9	-21	-30	-21	30	multi-exon	FALSE	canonical	3	15	junction_8	5.66651347832157	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAAAACTGAGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	26251988	26209725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906
ES.2507.18	chr10	-	177	1	Intergenic	novelGene_1900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	26271686	26271509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_26271500_26271700
ES.2507.2	chr10	-	4331	21	NIC	ENSMUSG00000039089.16	novel	3411	22	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	9.78468190591805	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTATATATGTATGAT	NA	False	NA	-7	True	AATAAA	-16	NA	26251191	26150364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220509_26220622_26228156_26228274_26251105
ES.2507.3	chr10	-	5667	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	-1092	-3	137	0	multi-exon	FALSE	canonical	2	5	junction_21	7.32838422979453	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTATATATGTATGA	NA	False	NA	-8	True	AATAAA	-15	NA	26251044	26150365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
ES.2507.4	chr10	-	4425	22	FSM	ENSMUSG00000039089.16	ENSMUST00000174766.2	3411	22	-32	-982	-32	1	multi-exon	FALSE	canonical	2	4	junction_21	7.47998084079664	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	-10	True	AATAAA	-13	NA	26251213	26150367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251105
ES.2507.5	chr10	-	3899	21	NIC	ENSMUSG00000039089.16	novel	4572	22	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.76698351772147	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTTTTATATATGTAT	NA	False	NA	-10	True	AATAAA	-13	NA	26251964	26150367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_26152162_26155514_26155578_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251906
ES.25070.1	chr4	+	1249	3	Intergenic	novelGene_20923	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACACCACCAACAA	3162	False	NA	NA	False	NA	NA	NA	148047455	148049819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148047760_148048737_148049283_148049419
ES.25071.1	chr4	+	776	4	NNC	ENSMUSG00000029019.9	novel	781	3	NA	NA	-386	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.85861230093008	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATTTGTGTCCGTGA	NA	False	NA	NA	False	AATAAA	-23	NA	148069858	148071655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148069918_148070301_148070559_148070752_148070976_148071418
ES.25072.1	chr4	+	156	1	Intergenic	novelGene_20927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	148121445	148121601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148121400_148121600
ES.25073.1	chr4	+	163	1	Intergenic	novelGene_20928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAAAATAAGAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	148121736	148121899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148121700_148121900
ES.25074.1	chr4	+	3063	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-461	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	40.2770785379917	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123072	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.10	chr4	+	5925	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	18	1	intron_retention	FALSE	non_canonical	0	0	junction_12	40.2770785379917	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123551	148144006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.12	chr4	+	5364	10	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	32	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	52.216311722263	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATAGCTGTTTTTAAAT	NA	False	NA	12	True	ATTAAA	-16	NA	148123565	148144003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.13	chr4	+	3866	11	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	33	0	intron_retention	FALSE	non_canonical	0	0	junction_10	37.0174283277485	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123566	148140663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.14	chr4	+	3338	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	33	-9	intron_retention	FALSE	non_canonical	0	0	junction_11	41.5978384689548	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCCTCAATGGAGGC	NA	False	NA	9	True	AAGAAA	-23	NA	148123566	148140654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.15	chr4	+	3598	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	2	intron_retention	FALSE	non_canonical	0	0	junction_6	44.327854422315	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123574	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136575_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.16	chr4	+	6235	12	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	2	intron_retention	FALSE	canonical	3	54	junction_1	21.8151513046846	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTTAAATGCTTAGC	NA	False	NA	19	True	ATTAAA	-23	NA	148123574	148144010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.17	chr4	+	6157	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	41	0	intron_retention	FALSE	non_canonical	0	0	junction_12	41.0063511341028	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTGTTTTTAAATGC	NA	False	NA	14	True	ATTAAA	-18	NA	148123574	148144005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.18	chr4	+	6180	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-40	0	intron_retention	FALSE	non_canonical	0	0	junction_12	34.6228689677149	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTTTTTAAATGCTTA	NA	False	NA	17	True	ATTAAA	-21	NA	148123575	148144008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.2	chr4	+	6363	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-425	14	intron_retention	FALSE	non_canonical	0	0	junction_12	45.2906508625738	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGCGTAATTTATTTT	NA	False	NA	31	True	ATTAAA	-35	NA	148123108	148144022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.20	chr4	+	2837	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-38	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	34.6228689677149	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGCTTGCTCTTGGCCT	NA	False	NA	22	True	AAGAAA	-36	NA	148123577	148140667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.21	chr4	+	6953	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-36	1	intron_retention	TRUE	non_canonical	0	0	junction_11	35.3915524309273	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123579	148144006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140088_148140140
ES.25074.22	chr4	+	2811	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	41.0063511341028	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123580	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.23	chr4	+	3664	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-35	2	intron_retention	FALSE	canonical	3	54	junction_1	20.2852162916741	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123580	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.24	chr4	+	4781	9	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-35	2	intron_retention	FALSE	canonical	3	54	junction_1	22.0269721024021	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123580	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148138139_148139441_148139562_148139829
ES.25074.25	chr4	+	6997	11	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-35	14	intron_retention	FALSE	canonical	3	11	junction_4	38.7738313814872	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGCGTAATTTATTTT	NA	False	NA	31	True	ATTAAA	-35	NA	148123580	148144022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126043_148126287_148127881_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.27	chr4	+	10350	9	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	54	junction_1	22.6205106043166	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATAGCTGTTTTTAAATG	NA	False	NA	13	True	ATTAAA	-17	NA	148123580	148144004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.28	chr4	+	7003	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	54	junction_1	20.2852162916741	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	16	True	ATTAAA	-20	NA	148123583	148144007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.29	chr4	+	4683	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-29	1	intron_retention	FALSE	canonical	0	0	junction_11	45.2501534681253	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123586	148144006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126043_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140391_148141459_148141591_148142834
ES.25074.3	chr4	+	6429	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	35.3915524309273	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTTTTTAAATGCTTA	NA	False	NA	17	True	ATTAAA	-21	NA	148123526	148144008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128269_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.30	chr4	+	6923	12	NNC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	-26	0	intron_retention	TRUE	non_canonical	0	0	junction_11	42.5229155527633	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTGTTTTTAAATGC	NA	False	NA	14	True	ATTAAA	-18	NA	148123589	148144005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140078_148140128
ES.25074.31	chr4	+	2812	13	NNC	ENSMUSG00000029009.18	novel	847	4	NA	NA	-14	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	34.6228689677149	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123601	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140084_148140134
ES.25074.32	chr4	+	3391	10	NIC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	-13	2	intron_retention	FALSE	canonical	0	0	junction_4	38.9608857353622	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123602	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.34	chr4	+	2863	12	NIC	ENSMUSG00000029009.18	novel	847	4	NA	NA	-9	7	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	21.8151513046846	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTCTTGGCCTTGT	NA	False	NA	25	True	AAGAAA	-39	NA	148123606	148140670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.35	chr4	+	3492	12	NNC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	11	-69	intron_retention	FALSE	non_canonical	0	0	junction_11	39.2891379854072	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGTTGGTTGTGTCTGT	NA	False	NA	-51	True	NA	NA	NA	148123626	148140594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126043_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.36	chr4	+	6473	12	NNC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_3	43.898831852528	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTGTTTTTAAATGC	NA	False	NA	14	True	ATTAAA	-18	NA	148123627	148144005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128269_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137302_148138036_148138139_148139441_148139562_148139829
ES.25074.37	chr4	+	3542	12	NNC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	14	2	intron_retention	FALSE	non_canonical	0	0	junction_11	42.5229155527633	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123629	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.4	chr4	+	6852	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-7	68	intron_retention	FALSE	canonical	3	10	junction_1	31.903134642226	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTGTGTATGTGTGTG	NA	False	NA	85	True	NA	NA	NA	148123526	148144076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123590_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.40	chr4	+	3284	13	NNC	ENSMUSG00000029009.18	novel	847	4	NA	NA	78	567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	34.6228689677149	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAGGCTGCTGCTAGTT	NA	False	NA	NA	False	NA	NA	NA	148123693	148141230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.43	chr4	+	2669	13	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	13	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	40.7662714616984	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTCTTGGCCTTGT	NA	False	NA	25	True	AAGAAA	-39	NA	148125660	148140670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.44	chr4	+	3446	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	15	6	intron_retention	FALSE	non_canonical	0	0	junction_11	42.1261388006061	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGCTCTTGGCCTTG	NA	False	NA	24	True	AAGAAA	-38	NA	148125662	148140669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148125779_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.45	chr4	+	6782	12	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_11	42.1261388006061	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTTTTTAAATGCTTA	NA	False	NA	17	True	ATTAAA	-21	NA	148125665	148144008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148125779_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.46	chr4	+	3498	10	NIC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	-138	2	intron_retention	FALSE	canonical	3	98	junction_9	12.6325075465475	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148125920	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.47	chr4	+	3653	9	NIC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	57	7	intron_retention	FALSE	canonical	3	68	junction_2	18.9699598049126	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGCTCTTGGCCTTGT	NA	False	NA	25	True	AAGAAA	-39	NA	148126115	148140670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136457_148136555_148136737_148136970_148138139_148139441_148139562_148139829
ES.25074.48	chr4	+	7181	7	NNC	ENSMUSG00000029009.18	novel	6072	12	NA	NA	-3148	1	intron_retention	FALSE	non_canonical	0	0	junction_6	44.335839528159	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	3097	False	NA	15	True	ATTAAA	-19	NA	148133986	148144006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.5	chr4	+	7023	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-7	14	intron_retention	FALSE	non_canonical	0	0	junction_11	35.3915524309273	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGCGTAATTTATTTT	NA	False	NA	31	True	ATTAAA	-35	NA	148123526	148144022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25074.50	chr4	+	3361	7	NNC	ENSMUSG00000029009.18	novel	4666	14	NA	NA	-550	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.1654302534536	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATAGCTGTTTTTAAAT	5695	False	NA	12	True	ATTAAA	-16	NA	148136584	148144003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140391_148141459_148141591_148141891
ES.25074.51	chr4	+	2832	1	ISM	ENSMUSG00000029009.18	ENSMUST00000069604.15	6072	12	14955	574	3468	-571	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTACTGGTGAAATT	71	False	NA	NA	False	AATGAA	-23	NA	148140602	148143434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148140600_148143400
ES.25074.6	chr4	+	6007	12	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_1	42.9235337788738	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	16	True	ATTAAA	-20	NA	148123528	148144007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126043_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136746_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.7	chr4	+	5999	12	FSM	ENSMUSG00000029009.18	ENSMUST00000097788.11	2652	12	-3	-3344	-3	-1	multi-exon	FALSE	canonical	3	10	junction_1	31.6729151439997	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTTTTTAAATGCTT	NA	False	NA	16	True	ATTAAA	-20	NA	148123530	148144007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148123590_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.8	chr4	+	3423	11	NIC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	11	2	intron_retention	FALSE	canonical	3	10	junction_1	31.903134642226	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGGCTTGCTCTTGGC	NA	False	NA	20	True	AAGAAA	-34	NA	148123544	148140665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148123590_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ES.25074.9	chr4	+	6055	13	NNC	ENSMUSG00000029009.18	novel	2652	12	NA	NA	11	1	intron_retention	FALSE	non_canonical	0	0	junction_12	50.3454731496951	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTTTTTAAATGCT	NA	False	NA	15	True	ATTAAA	-19	NA	148123544	148144006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148123590_148126040_148126287_148127881_148128265_148128900_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140077_148140128
ES.25075.1	chr4	-	6984	1	Intergenic	novelGene_20924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGAATTTCAAAAGCATC	4446	False	NA	NA	False	NA	NA	NA	148084767	148077783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148077800_148084800
ES.25075.10	chr4	-	6166	24	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	40.3806556843393	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7470	False	NA	-1	True	AATAAA	-22	NA	148123222	148088715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148109710_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.11	chr4	-	5012	22	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	25.583795892027	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7424	False	NA	-1	True	AATAAA	-22	NA	148123268	148088715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.12	chr4	-	6518	24	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	42.1040209746127	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7688	False	NA	-2	True	AATAAA	-21	NA	148123004	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148109708_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148122602
ES.25075.13	chr4	-	4659	18	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	30.9555994118689	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7456	False	NA	-2	True	AATAAA	-21	NA	148123236	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107862_148123169
ES.25075.14	chr4	-	5944	23	NNC	ENSMUSG00000029016.14	novel	2783	23	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.5697630648342	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7449	False	NA	-2	True	AATAAA	-21	NA	148123243	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108585_148109697_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.17	chr4	-	5911	21	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	107	junction_8	10.1058151576209	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7448	False	NA	-2	True	AATAAA	-21	NA	148123244	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.18	chr4	-	5060	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.1249526987836	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7513	False	NA	-2	True	AATAAA	-21	NA	148123179	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122365_148122431_148123137
ES.25075.19	chr4	-	5659	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	4	-1	intron_retention	FALSE	canonical	3	23	junction_4	24.3772318589822	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7426	False	NA	-2	True	AATAAA	-21	NA	148123266	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.2	chr4	-	6168	1	Genic_Genomic	ENSMUSG00000086806.2	novel	NA	NA	NA	NA	1593	4837	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGATTTTTATTT	2335	False	NA	NA	False	NA	NA	NA	148086878	148080710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_148080700_148086900
ES.25075.21	chr4	-	5299	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.7674656368699	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7450	False	NA	-2	True	AATAAA	-21	NA	148123242	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111238_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.22	chr4	-	5183	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	36.9096506898885	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7441	False	NA	-2	True	AATAAA	-21	NA	148123251	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098511_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122426_148123137
ES.25075.24	chr4	-	7291	21	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_11	36.6614238676023	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	7396	False	NA	-2	True	AATAAA	-21	NA	148123296	148088716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148101436_148102359_148102502_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.25	chr4	-	6082	23	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.8152652065934	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTTGTCTCCACGGTG	7468	False	NA	-3	True	AATAAA	-20	NA	148123224	148088717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098511_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148109697_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.26	chr4	-	5083	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.1232472015981	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTTGTCTCCACGGTG	7428	False	NA	-3	True	AATAAA	-20	NA	148123264	148088717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148111126_148111238_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.27	chr4	-	7089	22	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	35.9641418795693	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTTGTCTCCACGGTG	7450	False	NA	-3	True	AATAAA	-20	NA	148123242	148088717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.28	chr4	-	6381	23	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.1114600646328	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTTGTCTCCACGGTG	7677	False	NA	-3	True	AATAAA	-20	NA	148123015	148088717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148109697_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148122602
ES.25075.3	chr4	-	3376	25	Fusion	ENSMUSG00000086806.2_ENSMUSG00000029016.14	novel	3306	23	NA	NA	21	97	multi-exon	FALSE	canonical	0	0	junction_1	44.8788299201305	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTCCCAGTCTGTG	7443	False	NA	NA	False	AATAAA	-45	NA	148123249	148085450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148085852_148086099_148086470_148091199_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102083_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.30	chr4	-	5003	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	32.5614019655049	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCTTGTCTCCACGGT	7396	False	NA	-4	True	AATAAA	-19	NA	148123296	148088718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.31	chr4	-	5689	23	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	28.3066151775502	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGACCTTGTCTCCACG	7446	False	NA	-6	True	AATAAA	-17	NA	148123246	148088720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148109210_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.32	chr4	-	5161	21	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	8	-6	intron_retention	FALSE	canonical	3	13	junction_10	26.1264234061993	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7430	False	NA	-7	True	AATAAA	-16	NA	148123262	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.33	chr4	-	7260	23	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	28.3066151775502	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7442	False	NA	-7	True	AATAAA	-16	NA	148123250	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.35	chr4	-	5288	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_21	35.0527946489066	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7677	False	NA	-7	True	AATAAA	-16	NA	148123015	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148122602
ES.25075.36	chr4	-	6000	8	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	22192	-6	intron_retention	FALSE	canonical	3	107	junction_7	7.10848874549985	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	35	False	NA	-7	True	AATAAA	-16	NA	148100827	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588
ES.25075.37	chr4	-	5359	24	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-54	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	36.3875900655024	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7360	False	NA	-7	True	AATAAA	-16	NA	148123332	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108325_148108448_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.38	chr4	-	5335	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	28.0042794840626	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7443	False	NA	-7	True	AATAAA	-16	NA	148123249	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111238_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.39	chr4	-	6228	24	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.8867590531086	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7462	False	NA	-7	True	AATAAA	-16	NA	148123230	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098953_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148109697_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.4	chr4	-	7147	24	Fusion	ENSMUSG00000086806.2_ENSMUSG00000029016.14	novel	3306	23	NA	NA	6	-1134	multi-exon	TRUE	non_canonical	0	0	junction_1	27.6853096516979	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCATTTTGAGGACTA	7428	False	NA	NA	False	NA	NA	NA	148123264	148086681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148087999_148088060_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.40	chr4	-	5747	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	36.8303010356984	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGACCTTGTCTCCAC	7448	False	NA	-7	True	AATAAA	-16	NA	148123244	148088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148108448_148108565_148108673_148110989_148111158_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.41	chr4	-	5500	8	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	24349	-7	intron_retention	FALSE	canonical	3	107	junction_7	8	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAGACCTTGTCTCCA	2192	False	NA	-8	True	AATAAA	-15	NA	148098670	148088722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588
ES.25075.42	chr4	-	5168	23	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-19	-85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	37.1942633095548	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTTTTATTTGGCCCT	7446	False	NA	-86	True	GATAAA	-25	NA	148123246	148088800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107964_148109019_148109210_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.45	chr4	-	3331	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	21	-46	21	46	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACGCTCTCCTCCCATT	7443	False	NA	NA	False	NA	NA	NA	148123249	148090544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.47	chr4	-	2690	18	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-18	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	30.6383074329007	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCCTTCTGTTTC	7447	False	NA	NA	False	NA	NA	NA	148123245	148090753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148122365_148122431_148123137
ES.25075.48	chr4	-	3138	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	3	165	3	-165	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTCTCCTTCTGTT	7425	False	NA	NA	False	NA	NA	NA	148123267	148090755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.49	chr4	-	4211	24	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	19	-165	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	36.4267916940141	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTTCTCCTTCTGTT	7441	False	NA	NA	False	NA	NA	NA	148123251	148090755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148109697_148110178_148110389_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.5	chr4	-	5313	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	-130	-1877	-122	2	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCACGGTGCTCG	7292	False	NA	1	True	AATAAA	-24	NA	148123400	148088713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.50	chr4	-	4191	24	NNC	ENSMUSG00000029016.14	novel	2783	23	NA	NA	20	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.3179483883016	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGCCCAACTTTCTTC	7442	False	NA	NA	False	NA	NA	NA	148123250	148090765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148109697_148110178_148110389_148111082_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.51	chr4	-	3263	23	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	2	-188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.7674656368699	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGCCTCTTCATTGG	7424	False	NA	NA	False	NA	NA	NA	148123268	148090778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111238_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.52	chr4	-	4023	10	ISM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	21896	279	21645	176	intron_retention	FALSE	canonical	3	107	junction_8	7.39369100427294	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATGTTCATTACTAGG	NA	False	NA	NA	False	NA	NA	NA	148101374	148090869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957
ES.25075.53	chr4	-	3715	11	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	21	-8759	intron_retention	FALSE	non_canonical	0	0	junction_7	39.7996231137934	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTGGTTTCATTTTC	7443	False	NA	NA	False	AATAAA	-21	NA	148123249	148099804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111238_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.54	chr4	-	1955	13	ISM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	29	10028	-14	8273	5prime_fragment	FALSE	canonical	3	89	junction_2	15.3939021116227	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGATGCATTGACTTTCT	7451	False	NA	NA	False	ACTAAA	-21	NA	148123241	148100618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.55	chr4	-	163	1	Intergenic	novelGene_20925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	148110389	148110226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148110200_148110400
ES.25075.56	chr4	-	172	1	Intergenic	novelGene_20926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTATCACCA	NA	False	NA	NA	False	NA	NA	NA	148114924	148114752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148114800_148114900
ES.25075.57	chr4	-	4293	1	Antisense	novelGene_ENSMUSG00000083473.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAGGTTAGCCACAA	NA	False	NA	NA	False	NA	NA	NA	148119707	148115414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_148115400_148119700
ES.25075.6	chr4	-	5279	19	NNC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	12408	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	48.1708635874989	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCACGGTGCTCG	NA	False	NA	1	True	AATAAA	-24	NA	148110611	148088713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148109710_148110178_148110389
ES.25075.7	chr4	-	5203	21	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	45.8173275082692	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTCCACGGTGCTC	7667	False	NA	0	True	AATAAA	-23	NA	148123025	148088714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095234_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148122602
ES.25075.8	chr4	-	4965	23	NNC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.3067611582944	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7367	False	NA	-1	True	AATAAA	-22	NA	148123325	148088715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148091094_148093183_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ES.25075.9	chr4	-	5265	14	NIC	ENSMUSG00000029016.14	novel	5198	23	NA	NA	15175	0	intron_retention	FALSE	canonical	0	0	junction_13	33.6232168309216	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	NA	False	NA	-1	True	AATAAA	-22	NA	148107844	148088715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148102474_148103297_148103431_148104174_148104234_148107823
ES.25076.1	chr4	-	2558	2	Antisense	novelGene_ENSMUSG00000029009.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAGAAAC	8193	False	NA	NA	False	NA	NA	NA	148141497	148138889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_148140070_148140119
ES.25076.2	chr4	-	4649	2	Antisense	novelGene_ENSMUSG00000029009.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAGAAAC	8575	False	NA	NA	False	NA	NA	NA	148143590	148138889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_148140073_148140124
ES.25077.1	chr4	+	1865	1	Intergenic	novelGene_20929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATAGTGGCTGGGAG	5439	False	NA	NA	False	NA	NA	NA	148146432	148148297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148146400_148148300
ES.25078.1	chr4	-	1959	6	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.591605606472	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTGTGATTAATCAC	NA	False	NA	0	True	AATAAA	-21	NA	148172504	148161514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148161655_148163710_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ES.25078.10	chr4	-	3458	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-16	-507	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCTGAGATTTCTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	148172504	148162024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
ES.25078.11	chr4	-	3676	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	49	-508	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACCCTGAGATTTCTGT	NA	False	NA	-10	True	AATAAA	-16	NA	148172439	148162025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
ES.25078.13	chr4	-	1717	2	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	72	-510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTACCCTGAGATTTCT	NA	False	NA	-12	True	AATAAA	-14	NA	148172416	148162027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148163597_148172268
ES.25078.14	chr4	-	1148	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	11	2837	11	619	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGCCTTTGAGTCA	NA	False	NA	-2	True	NA	NA	NA	148172477	148164354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ES.25078.15	chr4	-	1052	4	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	57	604	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	557.437191280078	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTTGGTATGATT	NA	False	NA	-17	True	NA	NA	NA	148172431	148164369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148165062_148166019_148166216_148166727_148166834_148172373
ES.25078.16	chr4	-	1253	4	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	91	602	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	555.551577763537	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTGTCTTGGTATGA	NA	False	NA	-19	True	NA	NA	NA	148172397	148164371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148172136
ES.25078.17	chr4	-	1102	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-7	602	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTGTCTTGGTATGA	NA	False	NA	-19	True	NA	NA	NA	148172495	148164371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
ES.25078.18	chr4	-	1379	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	0	602	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTGTCTTGGTATGA	NA	False	NA	-19	True	NA	NA	NA	148172488	148164371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
ES.25078.2	chr4	-	4184	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTGTGTGATTAAT	NA	False	NA	-3	True	AATAAA	-18	NA	148172439	148161517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
ES.25078.20	chr4	-	2637	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	497	596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	593.25094816612	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACCCTGCTGTCTTG	NA	False	NA	-25	True	NA	NA	NA	148168736	148164377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148167814_148167857_148168451_148168658
ES.25078.21	chr4	-	1143	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	452	595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	512.132307123853	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCCACCCTGCTGTCTT	NA	False	NA	-26	True	NA	NA	NA	148168781	148164378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148168658
ES.25078.22	chr4	-	805	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-16	3207	-16	249	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGGTTGGTTTTTTCC	NA	False	NA	-1	True	NA	NA	NA	148172504	148164724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ES.25078.24	chr4	-	753	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-16	244	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGAGCTGTGGTTGGTTT	NA	False	NA	-6	True	NA	NA	NA	148172504	148164729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
ES.25078.25	chr4	-	976	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	45	244	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGAGCTGTGGTTGGTTT	NA	False	NA	-6	True	NA	NA	NA	148172443	148164729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
ES.25078.26	chr4	-	703	4	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	45	243	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	557.437191280078	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGAGCTGTGGTTGGTT	NA	False	NA	-7	True	NA	NA	NA	148172443	148164730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148165062_148166019_148166216_148166727_148166834_148172373
ES.25078.28	chr4	-	3146	1	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	27	-944	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGGGAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	148172461	148169315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148169300_148172500
ES.25078.3	chr4	-	4032	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-41	5	-41	-5	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGCATTGCTGTGTGA	NA	False	NA	-8	True	AATAAA	-13	NA	148172529	148161522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ES.25078.4	chr4	-	1940	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	592.252638238109	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATGCATTGCTGTGTG	NA	False	NA	-9	True	AATAAA	-12	NA	148172461	148161523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148161637_148163624_148165062_148166019_148166216_148166727_148166834_148172373
ES.25078.5	chr4	-	3973	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	-32	-8	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTATGCATTGCTGTG	NA	False	NA	-11	True	AATAAA	-10	NA	148172520	148161525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
ES.25078.6	chr4	-	3352	4	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	31	-507	combination_of_known_splicesites	FALSE	canonical	2	19	junction_2	526.85819302309	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCTGAGATTTCTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	148172457	148162024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148165062_148166019_148166216_148168415_148168451_148172373
ES.25078.7	chr4	-	3534	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	-45	507	-45	-507	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCTGAGATTTCTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	148172533	148162024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ES.25078.8	chr4	-	3600	4	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	91	-507	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	555.551577763537	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCTGAGATTTCTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	148172397	148162024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148172136
ES.25078.9	chr4	-	3404	4	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	50	-507	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	557.437191280078	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCCTGAGATTTCTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	148172438	148162024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148165062_148166019_148166216_148166727_148166834_148172373
ES.25079.1	chr4	+	157	1	Intergenic	novelGene_20930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	148177939	148178096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148177900_148178100
ES.2508.1	chr10	+	2284	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	8	1359	8	-1169	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGGCTTAATTAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	26648480	26793285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
ES.2508.2	chr10	+	3638	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	15	-2	15	2	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCTATTTACTACTACT	NA	False	NA	105	True	AATAAA	-22	NA	26648487	26794646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
ES.2508.3	chr10	+	3871	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	24	-244	24	244	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCTTGAAACAGTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	26648496	26794888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
ES.2508.4	chr10	+	3461	14	NIC	ENSMUSG00000039031.17	novel	3651	15	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	4.48666663735929	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAGTCCTATTTACTA	NA	False	NA	100	True	AATAAA	-17	NA	26648534	26794641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26792388_26792451_26793000
ES.2508.5	chr10	+	205	1	Intergenic	novelGene_1902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGCTACTCGACAACAT	4406	False	NA	NA	False	NA	NA	NA	26782911	26783116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_26782900_26783100
ES.25080.1	chr4	+	173	1	Intergenic	novelGene_20931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	148187943	148188116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148187900_148188100
ES.25081.1	chr4	-	3598	1	NIC	ENSMUSG00000029005.5	novel	5200	7	NA	NA	20567	-8097	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTAAATGAATACATAAA	NA	False	NA	NA	False	NA	NA	NA	148194588	148190990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148191000_148194600
ES.25082.1	chr4	-	155	1	Intergenic	novelGene_20932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	148196444	148196289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148196300_148196400
ES.25083.1	chr4	+	633	2	Antisense	novelGene_ENSMUSG00000029005.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAAATTTTA	3747	False	NA	NA	False	NA	NA	NA	148196799	148202125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_148197039_148201731
ES.25084.1	chr4	-	309	1	Intergenic	novelGene_20933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGTTAAAATCAGAAAT	NA	False	NA	NA	False	AATAAA	-30	NA	148200943	148200634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148200600_148200900
ES.25085.1	chr4	+	1290	10	FSM	ENSMUSG00000029003.12	ENSMUST00000084129.9	1162	10	-131	3	-131	0	multi-exon	FALSE	canonical	3	16	junction_1	269.730638385688	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148215240	148230153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148215424_148224299_148224478_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ES.25085.10	chr4	+	2235	6	NNC	ENSMUSG00000029003.12	novel	949	8	NA	NA	-24	0	intron_retention	FALSE	canonical	2	3	junction_3	333.857814046639	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148225156	148230153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148225292_148225371_148225491_148227442_148227515_148227601_148227651_148227998_148228816_148229110
ES.25085.11	chr4	+	1077	9	NNC	ENSMUSG00000029003.12	novel	1535	8	NA	NA	-7	-4	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	288.6865731204	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACAGGATGAACATG	NA	False	NA	23	True	AATAAA	-31	NA	148225173	148230149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148228916_148229001_148229110_148229185_148229560_148229654_148229828
ES.25085.2	chr4	+	1232	10	NIC	ENSMUSG00000029003.12	novel	1162	10	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	301.466456992081	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148215276	148230153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148215424_148224299_148224478_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
ES.25085.3	chr4	+	1220	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-271	0	-252	0	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148224928	148230153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
ES.25085.4	chr4	+	1243	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	290	2	-252	1	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGATGAACATGTGTAT	NA	False	NA	28	True	AATAAA	-36	NA	148224928	148230154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ES.25085.5	chr4	+	1125	7	NIC	ENSMUSG00000029003.12	novel	1535	8	NA	NA	-236	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	247.779079468429	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148224944	148230153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148225292_148225371_148225491_148227442_148227515_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ES.25085.6	chr4	+	1042	9	NNC	ENSMUSG00000029003.12	novel	1535	8	NA	NA	-233	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	221.403336695724	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTCATTAACCAAACAGG	NA	False	NA	14	True	AATAAA	-22	NA	148224947	148230140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148225074_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ES.25085.9	chr4	+	987	8	NNC	ENSMUSG00000029003.12	novel	1535	8	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	236.116712752012	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACAGGATGAACATG	NA	False	NA	23	True	AATAAA	-31	NA	148225148	148230149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228751_148228816_148229110_148229185_148229560_148229654_148229828
ES.25086.1	chr4	+	1865	2	Antisense	novelGene_ENSMUSG00000029001.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTATTCAGCCTAAATC	NA	False	NA	NA	False	NA	NA	NA	148234330	148238953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_148235430_148238187
ES.25087.1	chr4	-	1311	6	NNC	ENSMUSG00000055401.15	novel	1938	6	NA	NA	876	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	318.08426556496	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTCATCCTGTTTGGT	NA	False	NA	56	True	NA	NA	NA	148235227	148230170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148235035
ES.25087.10	chr4	-	1920	11	Fusion	ENSMUSG00000029001.16_ENSMUSG00000055401.15	novel	1163	6	NA	NA	-46	0	multi-exon	FALSE	canonical	0	0	junction_5	382.354142124811	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148244380	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148238012_148238102_148238614_148238699_148240602_148240739_148241065_148241164_148242993_148243281_148244199
ES.25087.11	chr4	-	1240	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	-99	-330	35	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236481	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
ES.25087.12	chr4	-	1829	10	Fusion	ENSMUSG00000029001.16_ENSMUSG00000055401.15	novel	1163	6	NA	NA	-3	0	multi-exon	FALSE	canonical	2	18	junction_5	377.157824645543	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148244337	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ES.25087.13	chr4	-	1204	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	-41	0	35	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236557	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ES.25087.14	chr4	-	1161	6	NNC	ENSMUSG00000055401.15	novel	1240	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	339.307530125696	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGTTTGAGGGCTTA	NA	False	NA	-19	True	AATAAA	-15	NA	148236588	148230245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231877_148233835_148234124_148236469
ES.25087.15	chr4	-	3070	5	NIC	ENSMUSG00000055401.15	novel	811	6	NA	NA	6	-5	intron_retention	FALSE	canonical	3	174	junction_4	267.985074211233	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGCCTGGTTTGAGGG	NA	False	NA	-23	True	AATAAA	-11	NA	148236359	148230249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148234124_148236286
ES.25087.16	chr4	-	1081	6	NNC	ENSMUSG00000055401.15	novel	811	6	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	346.367665927407	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGCCTGGTTTGAGG	NA	False	NA	-24	True	AATAAA	-10	NA	148236359	148230250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
ES.25087.17	chr4	-	1032	6	NNC	ENSMUSG00000055401.15	novel	1163	6	NA	NA	-42	-8	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	353.763762983152	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACCCAGCCTGGTTTGA	NA	False	NA	-26	True	AATAAA	-8	NA	148236424	148230252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ES.25087.18	chr4	-	1742	7	NIC	ENSMUSG00000029001.16	novel	1633	7	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	18.9362967164473	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244367	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148238102_148238614_148238699_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ES.25087.19	chr4	-	1505	5	FSM	ENSMUSG00000029001.16	ENSMUST00000105705.9	1034	5	-5	-466	-5	-1	multi-exon	FALSE	canonical	2	6	junction_2	15.4979837398289	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244339	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243281_148244199
ES.25087.2	chr4	-	2131	11	Fusion	ENSMUSG00000029001.16_ENSMUSG00000055401.15	novel	1938	6	NA	NA	-2	0	multi-exon	FALSE	canonical	1	3	junction_9	377.335606589148	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTCATCCTGTTTG	NA	False	NA	54	True	NA	NA	NA	148244336	148230172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148240602_148240739_148240851_148240948_148241036_148241164_148242384_148242616_148242993_148243281_148244199
ES.25087.20	chr4	-	1822	6	FSM	ENSMUSG00000029001.16	ENSMUST00000057907.10	1829	6	9	-2	9	-1	multi-exon	FALSE	canonical	3	37	junction_4	3.00665927567458	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244531	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ES.25087.21	chr4	-	3859	7	NNC	ENSMUSG00000029001.16	novel	1633	7	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	1	junction_1	19.6447618124188	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244349	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148238102_148238614_148240739_148240851_148240948_148241036_148241164_148242384_148242616_148242993_148243281_148244199
ES.25087.22	chr4	-	1612	6	FSM	ENSMUSG00000029001.16	ENSMUST00000172472.8	823	6	-18	-771	-16	-1	multi-exon	FALSE	canonical	3	7	junction_3	13.905394636615	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244350	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241065_148241164_148242993_148243281_148244199
ES.25087.23	chr4	-	2423	6	NIC	ENSMUSG00000029001.16	novel	793	5	NA	NA	23	-1	intron_retention	TRUE	canonical	1	1	junction_5	17.9510445378535	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244916	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148238891_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244772
ES.25087.24	chr4	-	3928	6	NNC	ENSMUSG00000029001.16	novel	1829	6	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_1	19.9439213797087	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCCTGCGGCTTTTG	NA	False	NA	-4	True	AATAAA	-15	NA	148244329	148237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148238102_148238614_148240739_148240851_148241164_148242384_148242616_148242993_148243281_148244199
ES.25087.25	chr4	-	2390	6	NIC	ENSMUSG00000029001.16	novel	1829	6	NA	NA	-4	0	intron_retention	FALSE	canonical	2	4	junction_1	15.0013332740793	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	148244312	148237259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148238891_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244199
ES.25087.26	chr4	-	1517	6	NIC	ENSMUSG00000029001.16	novel	1633	7	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	15.7556339129849	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCCCTGCGGCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	148244519	148237259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148244490
ES.25087.3	chr4	-	3473	5	FSM	ENSMUSG00000055401.15	ENSMUST00000126615.8	794	5	-2305	-374	35	-2	multi-exon	FALSE	canonical	3	782	junction_1	8.18535277187245	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGTTCATCCTGTT	NA	False	NA	52	True	NA	NA	NA	148236481	148230174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835
ES.25087.4	chr4	-	1774	9	Fusion	ENSMUSG00000029001.16_ENSMUSG00000055401.15	novel	1938	6	NA	NA	-3	-2	multi-exon	FALSE	canonical	2	6	junction_6	384.328452466117	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGTTCATCCTGTT	NA	False	NA	52	True	NA	NA	NA	148244337	148230174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148240602_148240739_148241065_148241164_148242993_148243281_148244199
ES.25087.5	chr4	-	1226	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	162	-42	-105	-29	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCCCTTCTCAGGGC	NA	False	NA	25	True	NA	NA	NA	148236208	148230201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ES.25087.6	chr4	-	3602	12	Fusion	ENSMUSG00000029001.16_ENSMUSG00000055401.15	novel	1633	7	NA	NA	20	17	multi-exon	FALSE	canonical	0	0	junction_11	362.836620565153	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGGGTTGCTGGCACT	NA	False	NA	0	True	AATAAA	-34	NA	148244520	148230226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242384_148242616_148242993_148243281_148244490
ES.25087.7	chr4	-	1063	6	NNC	ENSMUSG00000055401.15	novel	1240	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	318.08426556496	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236585	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234026_148236469
ES.25087.8	chr4	-	1130	6	NNC	ENSMUSG00000055401.15	novel	1240	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	335.767538633502	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236585	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ES.25087.9	chr4	-	1066	6	NNC	ENSMUSG00000055401.15	novel	1163	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	294.890895078163	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236572	148230244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236551
ES.25088.1	chr4	+	1384	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	-105	9	-105	-9	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGACGCACAGATGA	NA	False	NA	14	True	NA	NA	NA	148244972	148250872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ES.25088.2	chr4	+	1284	6	NNC	ENSMUSG00000041556.9	novel	1288	6	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.1825336294822	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATGGACGCACAGATG	NA	False	NA	13	True	NA	NA	NA	148245078	148250871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148245169_148248524_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ES.25089.1	chr4	-	1304	1	Intergenic	novelGene_20934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	148269710	148268406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148268400_148269700
ES.2509.1	chr10	-	161	1	Intergenic	novelGene_1901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	26657978	26657817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_26657800_26658000
ES.25090.1	chr4	+	187	1	Intergenic	novelGene_20935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATCTTTGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	148273603	148273790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148273600_148273800
ES.25091.1	chr4	+	175	1	Intergenic	novelGene_20936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	148511293	148511468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148511300_148511500
ES.25092.1	chr4	+	4245	1	Antisense	novelGene_ENSMUSG00000047719.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGACCAGCCAGCATA	8059	False	NA	NA	False	NA	NA	NA	148519546	148523791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_148519500_148523800
ES.25093.1	chr4	-	4124	2	NNC	ENSMUSG00000047719.3	novel	2992	2	NA	NA	-42	36839	intron_retention	FALSE	canonical	0	0	junction_1	0	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	148529270	148482112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148485351_148528384
ES.25093.2	chr4	-	3000	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	93	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529236	148518951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148521100_148528384
ES.25093.3	chr4	-	2470	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTGGCTTTGTTTCT	NA	False	NA	-1	True	ATTAAA	-15	NA	148529222	148518952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148521100_148528384_148528587_148529101
ES.25093.4	chr4	-	2576	3	FSM	ENSMUSG00000047719.3	ENSMUST00000156686.2	576	3	-7	-1993	3	-1	multi-exon	FALSE	canonical	2	6	junction_2	43.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTGGCTTTGTTTCT	NA	False	NA	-1	True	ATTAAA	-15	NA	148529225	148518952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148521100_148528384_148528587_148528998
ES.25093.5	chr4	-	973	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	26	526	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCTAGTGTCGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	148529192	148520419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148521100_148528384_148528587_148529101
ES.25093.6	chr4	-	1723	1	FSM	ENSMUSG00000064648.5	ENSMUST00000082714.5	152	1	-1268	-303	-1268	303	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGAATGGGCTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	148529210	148527487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148527500_148529200
ES.25094.1	chr4	+	8409	57	NIC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-57	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	29.2904177407659	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGACTGGCTTTCTG	NA	False	NA	38	True	AATAAA	-27	NA	148533010	148642144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.10	chr4	+	8655	59	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	32.6276738531902	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTATGACTGGCT	NA	False	NA	33	True	AATAAA	-22	NA	148533050	148642139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148607395_148607471_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.14	chr4	+	8189	58	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	28.7487390492545	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGTGTATGACTGG	NA	False	NA	31	True	AATAAA	-20	NA	148533056	148642137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641684
ES.25094.15	chr4	+	8673	59	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	32.7202679300247	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533057	148642140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628292_148628392_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.16	chr4	+	8563	58	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	28.7250473834901	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	NA	False	NA	27	True	AATAAA	-16	NA	148533059	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571384_148573938_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.18	chr4	+	8345	56	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	33.0600555463428	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533073	148642140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624434_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.2	chr4	+	8618	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	-53	-1	-53	1	multi-exon	FALSE	canonical	2	74	junction_19	24.6853638803358	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTATGACTGGCTTT	NA	False	NA	35	True	AATAAA	-24	NA	148533014	148642141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.21	chr4	+	4865	28	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	13	65383	-1	37327	5prime_fragment	FALSE	canonical	2	74	junction_19	28.3613272503584	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTACAAGCAACCGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	148533080	148576757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077
ES.25094.23	chr4	+	10071	58	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	29.1289678539488	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533080	148642140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148607395_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.24	chr4	+	8802	57	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.6292872465038	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTATGACTGGCT	NA	False	NA	33	True	AATAAA	-22	NA	148533081	148642139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533483_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543362_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.26	chr4	+	6041	38	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	15	22057	1	-12162	5prime_fragment	FALSE	canonical	2	74	junction_19	25.3493919602391	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCTTCACACTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	148533082	148620083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364
ES.25094.27	chr4	+	8356	56	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	4487	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	28.9777914392076	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATATGTGTATGACTGGC	1218	False	NA	32	True	AATAAA	-21	NA	148537568	148642138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619227_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.28	chr4	+	8194	55	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	5132	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	28.1356941259784	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	1863	False	NA	27	True	AATAAA	-16	NA	148538213	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622321_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.29	chr4	+	6136	44	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	20376	7	20362	-7	3prime_fragment	FALSE	canonical	2	74	junction_5	20.3764994703512	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	NA	False	NA	27	True	AATAAA	-16	NA	148553443	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.3	chr4	+	5363	29	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-32	40305	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	34.3042360685222	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAATTACAATATTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	148533035	148579735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148578748
ES.25094.30	chr4	+	4829	33	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	38240	-7	intron_retention	FALSE	canonical	0	0	junction_17	28.3261556472106	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	NA	False	NA	27	True	AATAAA	-16	NA	148571321	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148571380_148573932_148574076_148575791_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622815_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.31	chr4	+	3849	29	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	40887	6353	40873	3542	internal_fragment	FALSE	canonical	3	80	junction_5	15.7533200258464	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGCTTTCTATGACCTT	NA	False	NA	NA	False	AATAAA	-20	NA	148573954	148635787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415
ES.25094.32	chr4	+	176	1	Intergenic	novelGene_20938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCCAGGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	148583104	148583280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148583100_148583300
ES.25094.33	chr4	+	3944	30	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-29485	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	28.2500302526329	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	4859	False	NA	27	True	AATAAA	-16	NA	148599384	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301_148641594_148641684
ES.25094.34	chr4	+	3929	27	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-18644	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.3708624592308	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGTGTATGACTGG	6467	False	NA	31	True	AATAAA	-20	NA	148610225	148642137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148615615_148615806_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.35	chr4	+	3707	25	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	77386	3	-18416	-3	3prime_fragment	FALSE	canonical	3	113	junction_1	12.2779584576952	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGTGTATGACTGG	6695	False	NA	31	True	AATAAA	-20	NA	148610453	148642137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.36	chr4	+	3604	24	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	81868	0	-13934	0	3prime_fragment	FALSE	canonical	3	114	junction_3	11.8123321544171	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148614935	148642140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.37	chr4	+	3424	22	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-10464	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.5260752446375	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCATATATGTGTATG	NA	False	NA	26	True	AATAAA	-15	NA	148618405	148642132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630291_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.38	chr4	+	5653	15	NIC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-5888	-3	intron_retention	FALSE	canonical	3	119	junction_4	11.1073151112045	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATATGTGTATGACTGG	NA	False	NA	31	True	AATAAA	-20	NA	148622981	148642137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148640830_148641301
ES.25094.4	chr4	+	1047	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	-46	2	-32	2	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGGCCTCTGACTAT	NA	False	NA	14	True	AATAAA	-20	NA	148533035	148539428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
ES.25094.5	chr4	+	6096	19	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	-32	82576	-32	20134	5prime_fragment	FALSE	canonical	3	80	junction_8	31.1790923932871	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTGTGTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	148533035	148559564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370
ES.25094.6	chr4	+	6472	48	NNC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26.6598886059161	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533044	148642140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148533145_148536713_148536788_148550520_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.8	chr4	+	8488	57	NIC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	-21	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	28.995667339963	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	NA	False	NA	27	True	AATAAA	-16	NA	148533046	148642133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ES.25094.9	chr4	+	4601	4	NIC	ENSMUSG00000028991.16	novel	1003	5	NA	NA	-17	2	intron_retention	FALSE	canonical	3	159	junction_1	14.3836326735943	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGGCCTCTGACTAT	NA	False	NA	14	True	AATAAA	-20	NA	148533050	148539428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148536890_148537478_148537588_148538214_148538448_148539008
ES.25095.1	chr4	-	179	1	Intergenic	novelGene_20937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	148574769	148574590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148574600_148574800
ES.25096.1	chr4	-	177	1	Intergenic	novelGene_20939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATACTA	NA	False	NA	NA	False	NA	NA	NA	148606763	148606586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148606600_148606800
ES.25097.1	chr4	+	2811	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	-21	0	-21	0	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642864	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.11	chr4	+	2837	25	FSM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	-13	-8	11	0	multi-exon	FALSE	canonical	3	17	junction_15	122.740912483256	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642898	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.12	chr4	+	2789	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	12	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	124.806454326956	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642899	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646888_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.14	chr4	+	2701	19	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-7	193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	137.048349132706	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAACATTTGTATATG	NA	False	NA	7	True	AATAAA	-17	NA	148642904	148661263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654901_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
ES.25097.15	chr4	+	2879	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	126.106656798477	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGTTCTTGGTTGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	148642904	148666855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657953_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.17	chr4	+	2877	26	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	161.135748982031	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642908	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648043_148648154_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.18	chr4	+	2758	19	ISM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	22	5580	-2	197	5prime_fragment	FALSE	canonical	3	466	junction_4	45.4584670025532	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTTGTATATGTGTA	NA	False	NA	11	True	AATAAA	-21	NA	148642909	148661267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
ES.25097.19	chr4	+	4511	24	NIC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	17	junction_14	124.164550249869	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642909	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.2	chr4	+	3101	25	NIC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	0	2	intron_retention	FALSE	canonical	2	9	junction_6	163.472087109356	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642885	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648043_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.20	chr4	+	5188	24	NNC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	-2	1	intron_retention	FALSE	canonical	2	4	junction_13	167.372647181595	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGATGGTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	148642909	148666851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654898_148654956_148657375_148657487_148657567_148657647_148657734_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.21	chr4	+	2894	13	ISM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	-2	12450	-2	5772	5prime_fragment	FALSE	canonical	3	466	junction_4	47.0926981837123	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTGGAAATCATCTT	NA	False	NA	NA	False	CATAAA	-8	NA	148642909	148654400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107
ES.25097.22	chr4	+	2908	24	NIC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	-2	2	intron_retention	FALSE	canonical	3	17	junction_15	125.365461969477	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642909	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.23	chr4	+	2609	19	ISM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	-2	5792	-2	-12	5prime_fragment	FALSE	canonical	3	17	junction_15	135.214975155021	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	148642909	148661058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606
ES.25097.25	chr4	+	3329	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	126.106656798477	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAAGATGGTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	148642909	148666851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148659695_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.26	chr4	+	5798	22	NIC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	466	junction_4	48.3001293407281	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642909	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148662963_148663837_148663915_148664815_148664988_148665558_148666292_148666740
ES.25097.27	chr4	+	2959	24	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	466	junction_4	49.9468905083748	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642909	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.29	chr4	+	2744	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	125.68733251826	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAAAGATGGTTCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	148642915	148666849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650742_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.3	chr4	+	2715	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	-33	0	0	0	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642885	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.30	chr4	+	2751	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	126.197259335886	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642915	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649190_148649652_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.31	chr4	+	3211	24	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	466	junction_4	50.5285111079142	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAAAGATGGTTCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	148642915	148666849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.32	chr4	+	4435	24	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_14	127.383676875083	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148642915	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148654956_148657375_148657427_148657569_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.33	chr4	+	5191	23	NIC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	-2	2	intron_retention	FALSE	canonical	3	466	junction_4	47.1908381639018	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642916	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.34	chr4	+	2549	20	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-2	613	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	135.207627347997	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTATGACAGTGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	148642916	148661683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148661299
ES.25097.35	chr4	+	2469	23	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.791791307883	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642916	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644085_148647173_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.37	chr4	+	3164	19	NIC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	0	197	intron_retention	FALSE	canonical	2	9	junction_6	213.274073077141	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTTGTATATGTGTA	NA	False	NA	11	True	AATAAA	-21	NA	148642918	148661267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648043_148648154_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265
ES.25097.39	chr4	+	2696	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	124.285953606548	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642918	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654898_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.40	chr4	+	1927	13	NNC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	0	4820	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	164.774150986535	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTTTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	148642918	148653448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648366_148648564_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107
ES.25097.41	chr4	+	2995	18	ISM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	1	5589	1	199	5prime_fragment	FALSE	canonical	3	466	junction_4	46.038196868842	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGTATATGTGTATA	NA	False	NA	13	True	AATAAA	-23	NA	148642919	148661269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265
ES.25097.42	chr4	+	1932	13	ISM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	8	13402	1	4820	5prime_fragment	FALSE	canonical	3	466	junction_4	47.0926981837123	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTTTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	148642919	148653448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107
ES.25097.43	chr4	+	2730	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.233222207503	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642919	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643007_148644001_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.44	chr4	+	3051	18	NNC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	1	197	intron_retention	FALSE	canonical	0	0	junction_15	142.935802368112	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTTGTATATGTGTA	NA	False	NA	11	True	AATAAA	-21	NA	148642919	148661267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657569_148657647_148657734_148657842_148660265
ES.25097.45	chr4	+	4424	18	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	1	188	intron_retention	FALSE	canonical	3	466	junction_4	43.5077847705458	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGTTTATAACATTTGT	NA	False	NA	2	True	AATAAA	-12	NA	148642919	148661258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606
ES.25097.46	chr4	+	5177	24	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	1	-3	intron_retention	FALSE	canonical	3	466	junction_4	50.5215146294496	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGTTCTTGGTTGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	148642919	148666855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.47	chr4	+	2670	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	125.583796449047	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148642930	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664914_148665551_148665621_148666214_148666292_148666740
ES.25097.48	chr4	+	2709	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	126.202707038672	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148642951	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660613_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.49	chr4	+	3018	25	NNC	ENSMUSG00000017264.17	novel	1188	9	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.233222207503	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148643122	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643501_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.5	chr4	+	2745	25	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	124.9045677374	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642885	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649101_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.50	chr4	+	3880	24	NNC	ENSMUSG00000017264.17	novel	1188	9	NA	NA	243	0	intron_retention	FALSE	canonical	0	0	junction_1	127.847942526728	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148643161	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643501_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.51	chr4	+	3799	23	NNC	ENSMUSG00000017264.17	novel	1188	9	NA	NA	256	-3	intron_retention	FALSE	canonical	0	0	junction_1	131.544637806097	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGTTCTTGGTTGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	148643174	148666855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643501_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.52	chr4	+	2728	25	NNC	ENSMUSG00000017264.17	novel	1188	9	NA	NA	908	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.233222207503	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	534	False	NA	NA	False	ATTAAA	-14	NA	148643826	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148643923_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.53	chr4	+	2827	26	NNC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	1098	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	215.425138737335	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	724	False	NA	NA	False	ATTAAA	-22	NA	148644016	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148647931_148647961_148648043_148648154_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.54	chr4	+	2225	20	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-186	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	139.116722948315	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	4053	False	NA	NA	False	ATTAAA	-16	NA	148647345	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653116_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.55	chr4	+	2126	20	NNC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-123	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	137.971533456439	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	4116	False	NA	NA	False	ATTAAA	-16	NA	148647408	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148647593_148648300_148648377_148648569_148648681_148649101_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.56	chr4	+	2397	14	NNC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	-55	193	intron_retention	FALSE	canonical	2	4	junction_9	238.749776170161	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATAACATTTGTATATG	4184	False	NA	7	True	AATAAA	-17	NA	148647476	148661263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148647593_148648043_148648154_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654898_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265
ES.25097.57	chr4	+	6100	3	NIC	ENSMUSG00000017264.17	novel	2682	24	NA	NA	-2888	2	intron_retention	FALSE	canonical	3	585	junction_2	1	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148657734	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148657842_148660265_148665621_148666214
ES.25097.58	chr4	+	3162	7	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	-561	0	intron_retention	FALSE	canonical	3	540	junction_1	39.3082547169025	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148660061	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148660362_148660606_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.59	chr4	+	5989	1	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	239	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148660861	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148660900_148666800
ES.25097.6	chr4	+	3028	24	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	1	2	intron_retention	FALSE	canonical	3	466	junction_4	49.7863488247588	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGATGGTTCTTGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148642886	148666852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.60	chr4	+	5371	2	NIC	ENSMUSG00000017264.17	novel	401	6	NA	NA	411	3	intron_retention	FALSE	canonical	3	663	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGATGGTTCTTGGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	148661033	148666853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148666292_148666740
ES.25097.61	chr4	+	3588	4	NIC	ENSMUSG00000017264.17	novel	2816	25	NA	NA	1026	0	intron_retention	FALSE	canonical	3	585	junction_2	31.8991466273873	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148661648	148666850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148664988_148665558_148665621_148666214_148666292_148666740
ES.25097.8	chr4	+	5092	25	NIC	ENSMUSG00000017264.17	novel	2790	25	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_6	164.272618094299	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642886	148666858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648043_148648154_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ES.25098.1	chr4	-	193	1	Intergenic	novelGene_20940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGAAGCCGGGAG	NA	False	NA	NA	False	NA	NA	NA	148675029	148674836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148674800_148675000
ES.25099.1	chr4	+	1369	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	-30	-1	-30	1	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATTTTTGTTCCTAC	8686	False	NA	29	True	AATACA	-37	NA	148675929	148679077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.10	chr4	+	2844	2	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	1	15	1	-15	intron_retention	FALSE	canonical	3	3366	junction_1	0	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8717	False	NA	13	True	AATACA	-21	NA	148675960	148679061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148676244_148676500
ES.25099.11	chr4	+	2053	9	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	1	4824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1393.82295773172	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8717	False	NA	NA	False	NA	NA	NA	148675960	148684274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148683143_148683266_148684070
ES.25099.12	chr4	+	3385	9	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	1	3	intron_retention	FALSE	canonical	3	7	junction_7	1386.70742565799	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTGTGTCTCTTGC	8717	False	NA	8	True	AATAAA	-18	NA	148675960	148688877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148687124_148687354_148687448
ES.25099.13	chr4	+	3961	8	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	1	4824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1129.14329091952	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8717	False	NA	NA	False	NA	NA	NA	148675960	148684274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148680193_148682766
ES.25099.14	chr4	+	3040	9	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_7	1385.84806503996	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGGCTGTGTGTCTCT	8717	False	NA	5	True	AATAAA	-15	NA	148675960	148688874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148687124_148688276_148688712
ES.25099.15	chr4	+	2349	5	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	4	-15	intron_retention	FALSE	canonical	3	3072	junction_4	137.364478668978	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8720	False	NA	13	True	AATACA	-21	NA	148675963	148679061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.16	chr4	+	2917	8	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	4	1	intron_retention	FALSE	canonical	1	6	junction_1	1568.39630820524	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	8720	False	NA	6	True	AATAAA	-16	NA	148675963	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148687124_148688276_148688712
ES.25099.17	chr4	+	5201	16	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	4	-2535	intron_retention	FALSE	canonical	0	0	junction_14	1571.75163432395	928	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCGTTTATACATTTATA	8720	False	NA	NA	False	ATTAAA	-20	NA	148675963	148697421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679172_148679315_148679467_148687124_148687354_148687448_148688276_148690036_148690234_148690485_148690634_148692397_148692517_148694573_148696229_148696491_148696624_148697107
ES.25099.18	chr4	+	1716	5	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	5	-24	intron_retention	FALSE	canonical	3	3092	junction_4	98.1885940422817	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8721	False	NA	4	True	AATACA	-12	NA	148675964	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148678455_148678539
ES.25099.19	chr4	+	1318	7	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1202.77646394591	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGACCTTTTCATTTT	8722	False	NA	20	True	AATACA	-28	NA	148675965	148679068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676622_148676938_148677026_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.2	chr4	+	2443	4	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	-9	-15	intron_retention	FALSE	canonical	3	3092	junction_3	124.718349358331	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8707	False	NA	13	True	AATACA	-21	NA	148675950	148679061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148677899_148678224_148678455_148678539
ES.25099.21	chr4	+	2744	3	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	7	-24	intron_retention	FALSE	canonical	3	3092	junction_2	137	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8723	False	NA	4	True	AATACA	-12	NA	148675966	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148678455_148678539
ES.25099.23	chr4	+	2936	10	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	11	1	intron_retention	FALSE	canonical	3	7	junction_7	1506.29305429989	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	8727	False	NA	6	True	AATAAA	-16	NA	148675970	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148687124_148687354_148687448_148688276_148688712
ES.25099.24	chr4	+	2419	11	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	11	1	multi-exon	FALSE	canonical	3	7	junction_7	1564.4890667563	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	8727	False	NA	6	True	AATAAA	-16	NA	148675970	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ES.25099.25	chr4	+	1370	7	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	12	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1204.36520854579	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8728	False	NA	4	True	AATACA	-12	NA	148675971	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676690_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.27	chr4	+	5536	15	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	15	-2452	intron_retention	FALSE	canonical	1	3	junction_10	1587.29517720928	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATTTCCCTAAGCAAT	8731	False	NA	NA	False	ATTAAA	-18	NA	148675974	148697504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679172_148679315_148679467_148687124_148687354_148687448_148688276_148690036_148690234_148690485_148690634_148692397_148692517_148694573_148696624_148697107
ES.25099.29	chr4	+	2292	12	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	34	1	multi-exon	FALSE	canonical	0	0	junction_7	1592.289795668	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	8750	False	NA	6	True	AATAAA	-16	NA	148675993	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679212_148679315_148679467_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ES.25099.3	chr4	+	2117	5	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	-5	-20	intron_retention	FALSE	canonical	3	3092	junction_4	113.166912125409	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTCATGACCTCTGA	8711	False	NA	8	True	AATACA	-16	NA	148675954	148679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148676938_148677899_148678224_148678455_148678539
ES.25099.30	chr4	+	3063	1	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	34	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTCATGACCTCTGA	8750	False	NA	8	True	AATACA	-16	NA	148675993	148679056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676000_148679100
ES.25099.31	chr4	+	2000	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	36	-15	intron_retention	FALSE	canonical	3	3072	junction_5	123.408913778544	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8752	False	NA	13	True	AATACA	-21	NA	148675995	148679061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148676938_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.32	chr4	+	2223	8	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	38	6411	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	1128.44643069079	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTGTCTGTATAATT	8754	False	NA	NA	False	NA	NA	NA	148675997	148685861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148685328
ES.25099.35	chr4	+	5109	3	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-3745	1	intron_retention	TRUE	canonical	0	0	junction_1	17	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	NA	False	NA	6	True	AATAAA	-16	NA	148683265	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148684264_148684327_148688276_148688712
ES.25099.36	chr4	+	2402	8	NNC	ENSMUSG00000028979.18	novel	1181	7	NA	NA	-3633	-304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.13635691430002	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCTGACCTTAAAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	148683377	148699652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148683507_148687124_148687354_148688143_148688276_148690485_148690634_148692397_148692517_148696491_148696624_148697107_148697183_148698214
ES.25099.37	chr4	+	4738	2	NNC	ENSMUSG00000028979.18	novel	794	4	NA	NA	-2937	1	intron_retention	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTGTGTGTCTCTT	NA	False	NA	6	True	AATAAA	-16	NA	148684073	148688875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148684264_148684327
ES.25099.38	chr4	+	2691	11	NNC	ENSMUSG00000028979.18	novel	1181	7	NA	NA	-27	-304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.18822850156	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCTGACCTTAAAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	148686983	148699652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148687005_148687124_148687354_148687448_148687627_148688143_148688276_148690036_148690234_148690485_148690634_148692397_148692517_148694573_148694653_148696548_148696624_148697107_148697183_148698214
ES.25099.39	chr4	+	2785	11	FSM	ENSMUSG00000028979.18	ENSMUST00000052060.7	3058	11	-29	302	-19	-302	multi-exon	FALSE	canonical	0	0	junction_8	9.81019877474458	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGACCTTAAAGGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	148686991	148699654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148690036_148690234_148690485_148690634_148692397_148692517_148694573_148694653_148696491_148696624_148697107_148697183_148698214
ES.25099.4	chr4	+	1289	7	NNC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	-5	-24	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_5	1202.67291434076	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8711	False	NA	4	True	AATACA	-12	NA	148675954	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678569_148678663_148678743
ES.25099.40	chr4	+	731	5	FSM	ENSMUSG00000028979.18	ENSMUST00000105701.9	738	5	6	1	-4	-1	multi-exon	FALSE	canonical	2	14	junction_1	7.49583217528247	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGGCTGTGTGTCTC	NA	False	NA	4	True	AATAAA	-14	NA	148687016	148688873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148687048_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ES.25099.41	chr4	+	2353	2	NIC	ENSMUSG00000028979.18	novel	1181	7	NA	NA	2	2266	intron_retention	FALSE	canonical	2	3	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGCCAAAAGTACTAAAT	NA	False	NA	NA	False	NA	NA	NA	148687026	148691140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148688276_148690036
ES.25099.42	chr4	+	7613	6	NIC	ENSMUSG00000028979.18	novel	3058	11	NA	NA	91	-304	intron_retention	FALSE	canonical	1	4	junction_5	10.9105453575887	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCTGACCTTAAAGGT	NA	False	NA	NA	False	AATAAA	-14	NA	148687122	148699652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148687354_148687448_148687627_148688143_148690634_148692397_148692517_148694573_148696624_148697107
ES.25099.43	chr4	+	7269	3	NIC	ENSMUSG00000028979.18	novel	3058	11	NA	NA	3103	-305	intron_retention	FALSE	canonical	1	4	junction_2	3	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGCTGACCTTAAAGG	NA	False	NA	NA	False	AATAAA	-13	NA	148690134	148699651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148690634_148692397_148696624_148697107
ES.25099.44	chr4	+	3130	1	NIC	ENSMUSG00000028979.18	novel	3058	11	NA	NA	7255	-2540	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAAACCGTTTATACAT	NA	False	NA	NA	False	ATTAAA	-15	NA	148694286	148697416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148694300_148697400
ES.25099.45	chr4	+	11014	1	Genic_Genomic	ENSMUSG00000028979.18	novel	NA	NA	NA	NA	8165	6254	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGCAAACAAGCAACACT	NA	False	NA	NA	False	NA	NA	NA	148695196	148706210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_148695200_148706200
ES.25099.46	chr4	+	10621	2	NNC	ENSMUSG00000028979.18	novel	3058	11	NA	NA	8166	6254	intron_retention	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGCAAACAAGCAACACT	NA	False	NA	NA	False	NA	NA	NA	148695197	148706210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148703251_148703642
ES.25099.5	chr4	+	1645	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	-5	-24	intron_retention	FALSE	canonical	3	3072	junction_5	104.807633309793	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8711	False	NA	4	True	AATACA	-12	NA	148675954	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148678455_148678539_148678663_148678743
ES.25099.6	chr4	+	1235	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	-5	-15	combination_of_known_splicesites	FALSE	canonical	3	136	junction_2	1239.30522471262	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGACCTCTGACCTTT	8711	False	NA	13	True	AATACA	-21	NA	148675954	148679061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ES.25099.7	chr4	+	1725	5	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	0	-24	intron_retention	FALSE	canonical	3	3072	junction_4	104.623133197205	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTCAGTCATGACCT	8716	False	NA	4	True	AATACA	-12	NA	148675959	148679052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148678663_148678743
ES.25099.8	chr4	+	1405	6	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	14	0	-14	intron_retention	FALSE	canonical	3	3092	junction_5	102.267101259398	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGACCTCTGACCTTTT	8716	False	NA	14	True	AATACA	-22	NA	148675959	148679062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
ES.25099.9	chr4	+	2498	12	Fusion	ENSMUSG00000028979.18_ENSMUSG00000006442.11	novel	1338	7	NA	NA	1	5	multi-exon	FALSE	non_canonical	0	0	junction_2	1596.77748311357	917	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTCTCTTGCCG	8717	False	NA	10	True	AATAAA	-20	NA	148675960	148688879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_148676244_148676500_148676624_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743_148679467_148679557_148679621_148687124_148687354_148687448_148687627_148688143_148688276_148688712
ES.251.1	chr1	+	199	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGGATGGTTTTTACT	NA	False	NA	NA	False	NA	NA	NA	34985329	34985528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_34985300_34985500
ES.2510.1	chr10	-	2839	3	Intergenic	novelGene_1903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAAGGTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	26807045	26803054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_26805571_26805963_26806098_26806856
ES.25100.1	chr4	+	176	1	Intergenic	novelGene_20942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	148710013	148710189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148710000_148710200
ES.25101.1	chr4	-	3064	3	Intergenic	novelGene_20941	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148684480	148681152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148681615_148681813_148684268_148684332
ES.25102.1	chr4	-	7221	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	2	0	-2	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTAGTAGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	148711222	148696840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.10	chr4	-	1494	2	NNC	ENSMUSG00000041459.16	novel	731	2	NA	NA	274	-5	intron_retention	FALSE	canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTGTGTGTTTGTAG	NA	False	NA	NA	False	ATTAAA	-9	NA	148701163	148696849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148697380_148700199
ES.25102.11	chr4	-	4920	5	ISM	ENSMUSG00000041459.16	ENSMUST00000190552.7	741	6	1360	-4323	-18	-5	3prime_fragment	FALSE	canonical	3	168	junction_2	404.77794838652	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATTGTGTGTTTGTAG	NA	False	NA	NA	False	ATTAAA	-9	NA	148705087	148696849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048
ES.25102.12	chr4	-	3616	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	40	junction_1	394.331255277703	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGTGTCTGGAGTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	148711222	148699923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.13	chr4	-	4141	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	250	3086	1	-2	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTAGTGTCTGGAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	148711226	148699924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.14	chr4	-	3807	6	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	409	junction_1	273.041095807939	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTAGTGTCTGGAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	148711221	148699924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.15	chr4	-	2644	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	-4	intron_retention	FALSE	canonical	3	40	junction_1	449.793240482417	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTAGTGTCTGGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	148711221	148699926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.17	chr4	-	2565	8	FSM	ENSMUSG00000041459.16	ENSMUST00000191450.7	1304	8	-6	-1255	1	-4	multi-exon	FALSE	canonical	3	29	junction_2	409.46231542732	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTAGTGTCTGGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	148711221	148699926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148701302_148702022_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.18	chr4	-	3140	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	19	-1255	15	-5	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGTTTAGTGTCTGGAG	NA	False	NA	NA	False	AATAAA	-16	NA	148711196	148699927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.2	chr4	-	5496	8	NNC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	417.754444034057	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTAGTAGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	148711221	148696840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701302_148702022_148702191_148703193_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.20	chr4	-	4033	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	3189	1	39	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTGAAAGTCTGG	NA	False	NA	0	True	AATAAA	-14	NA	148711221	148700027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.21	chr4	-	3310	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	36	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGGTTTTGAAAGTC	NA	False	NA	-3	True	AATAAA	-11	NA	148711222	148700030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.22	chr4	-	1718	9	NIC	ENSMUSG00000041459.16	novel	1773	10	NA	NA	1	35	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	474.017783817232	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGGTTTTGAAAGT	NA	False	NA	-4	True	AATAAA	-10	NA	148711221	148700031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148700287_148701028_148701302_148702022_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.23	chr4	-	3943	7	NNC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	35	intron_retention	FALSE	canonical	0	0	junction_1	409.190834316812	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGGTTTTGAAAGT	NA	False	NA	-4	True	AATAAA	-10	NA	148711222	148700031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702890_148702976_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.24	chr4	-	3841	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	258	3378	1	-1	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCAGGAGTCCTGGGGTA	NA	False	NA	NA	False	ATTAAA	-25	NA	148711218	148700216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.25	chr4	-	3689	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	255	3533	1	4	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCGTGAGTTATTGTAAG	NA	False	NA	NA	False	NA	NA	NA	148711221	148700371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.26	chr4	-	1996	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATCGTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	148711221	148700375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.27	chr4	-	2416	7	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	-11	6	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCACCTGTCATGCAT	NA	False	NA	4	True	AATAAA	-32	NA	148711464	148701166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.28	chr4	-	3173	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	-30	4334	-30	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711506	148701172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.3	chr4	-	5467	8	NIC	ENSMUSG00000041459.16	novel	1773	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	41	junction_2	406.055741624377	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	148711221	148696843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.30	chr4	-	1209	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	797	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711222	148701172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.31	chr4	-	1133	8	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	407.75718064474	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGATTCATCACCTGTC	NA	False	NA	-2	True	AATAAA	-26	NA	148711225	148701172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.32	chr4	-	1238	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	-35	-2	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGATTCATCACCTG	NA	False	NA	-4	True	AATAAA	-24	NA	148711262	148701174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.33	chr4	-	1881	7	NNC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	516.829033627175	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAATGGATTCATCAC	NA	False	NA	-7	True	AATAAA	-21	NA	148711221	148701177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702191_148703193_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709835_148711137
ES.25102.34	chr4	-	2146	7	NNC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	443.486721585012	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAGTCAAATGGATTCA	NA	False	NA	-11	True	AATAAA	-17	NA	148711219	148701181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701302_148702022_148703249_148703640_148703802_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.35	chr4	-	2132	7	NNC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_5	432.799190027995	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711221	148701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709606_148709834_148711137
ES.25102.36	chr4	-	1146	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	414.885772329725	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711221	148701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702093_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.38	chr4	-	1128	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	406.055741624377	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711221	148701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.39	chr4	-	1817	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_7	453.895474796584	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711204	148701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148710501
ES.25102.4	chr4	-	6258	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	231	6	0	0	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	148711222	148696844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.41	chr4	-	1318	8	NIC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	409.746860629729	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711221	148701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.42	chr4	-	2075	8	NNC	ENSMUSG00000041459.16	novel	1304	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	417.754444034057	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCAAGTCAAATGGATT	NA	False	NA	-13	True	AATAAA	-15	NA	148711220	148701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701302_148702022_148703054_148703133_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.43	chr4	-	1050	2	ISM	ENSMUSG00000041459.16	ENSMUST00000189048.7	1096	6	6627	-724	36	-1	3prime_fragment	FALSE	canonical	3	205	junction_1	0	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCAAGTCAAATGGATT	NA	False	NA	-13	True	AATAAA	-15	NA	148703192	148701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148702163_148703121
ES.25102.44	chr4	-	2838	7	NNC	ENSMUSG00000041459.16	novel	7477	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	409.190834316812	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711476	148701319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702895_148703052_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.45	chr4	-	3050	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	-55	4482	-55	-1	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCTTTGTTTTGCAGC	NA	False	NA	NA	False	AATAAA	-16	NA	148711531	148701320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.46	chr4	-	2670	7	NNC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_1	409.190834316812	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	148711220	148701321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148703054_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.48	chr4	-	1767	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	-4	141	0	-4	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTGTCTTTGTTTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	148711219	148701323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.49	chr4	-	1892	7	ISM	ENSMUSG00000041459.16	ENSMUST00000191450.7	1304	8	-13	146	-1	-8	5prime_fragment	FALSE	canonical	3	29	junction_1	398.417285434924	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711228	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_148702283_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.5	chr4	-	6494	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	148711220	148696844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.51	chr4	-	1184	8	NIC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	477.117792327117	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711223	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.52	chr4	-	2143	4	NNC	ENSMUSG00000041459.16	novel	1411	5	NA	NA	-44	-8	intron_retention	FALSE	canonical	0	0	junction_1	509.213118448455	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148705191	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148703054_148703145_148703249_148703640_148703812_148705048
ES.25102.53	chr4	-	1646	7	NNC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_1	409.190834316812	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711218	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702038_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.54	chr4	-	1284	8	NIC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	468.447893123054	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148702195_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.55	chr4	-	2213	7	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	40	junction_1	394.331255277703	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711223	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.56	chr4	-	1894	7	NIC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	1	-8	intron_retention	FALSE	canonical	3	28	junction_1	398.788756388921	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.57	chr4	-	2531	7	NNC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	1	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	409.190834316812	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702883_148703084_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.58	chr4	-	2976	7	NNC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_4	513.230833922602	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711222	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148707042_148707285_148709581_148709834_148711137
ES.25102.59	chr4	-	2917	7	NNC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	-20	-8	intron_retention	FALSE	non_canonical	2	9	junction_5	405.847125022328	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711496	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709627_148709717_148709834_148711137
ES.25102.6	chr4	-	5661	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	28	junction_2	409.746860629729	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	148711226	148696844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701302_148702022_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.61	chr4	-	1772	7	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	15	-8	intron_retention	FALSE	canonical	2	50	junction_1	390.616926583236	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711196	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148702195_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.64	chr4	-	1247	8	NNC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	480.063048580335	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701566_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.65	chr4	-	1775	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	231	4489	0	-8	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711222	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.68	chr4	-	1238	8	NNC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	481.405891793049	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711221	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148701566_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.69	chr4	-	1720	7	NIC	ENSMUSG00000041459.16	novel	6513	7	NA	NA	0	-8	intron_retention	FALSE	canonical	2	10	junction_1	405.475612364322	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711219	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148702093_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.7	chr4	-	5677	3	FSM	ENSMUSG00000041459.16	ENSMUST00000190630.7	748	3	-10	-4919	-10	-1	multi-exon	FALSE	canonical	3	28	junction_1	548.5	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTGTTTGTAGTAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	148703753	148696845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702283_148703121_148703249_148703640
ES.25102.70	chr4	-	1174	8	NIC	ENSMUSG00000041459.16	novel	6425	7	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	478.472228524695	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711222	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148701501_148702022_148702093_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.71	chr4	-	2926	6	NIC	ENSMUSG00000041459.16	novel	7477	6	NA	NA	2	-8	intron_retention	FALSE	canonical	3	3	junction_5	437.909579707958	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148710778	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148710501
ES.25102.72	chr4	-	2615	7	NNC	ENSMUSG00000041459.16	novel	6495	7	NA	NA	-1	-8	intron_retention	TRUE	canonical	0	0	junction_1	409.190834316812	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATATGTGTCTTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	148711223	148701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148703002_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.73	chr4	-	2491	7	NNC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	1	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	409.190834316812	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAACTGATTTAAATA	NA	False	NA	NA	False	NA	NA	NA	148711221	148701342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_148702853_148703079_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.8	chr4	-	5535	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	1	-3530	1	-1	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTGTTTGTAGTAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	148711221	148696845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25102.9	chr4	-	6237	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	2	-4335	-2	-3	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTGTTTGTAGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	148711213	148696847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ES.25103.1	chr4	-	176	1	Intergenic	novelGene_20943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGTTTAAAATT	7414	False	NA	NA	False	NA	NA	NA	148715943	148715767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148715800_148715900
ES.25104.1	chr4	+	159	1	Intergenic	novelGene_20944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	148716401	148716560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_148716400_148716600
ES.25105.1	chr4	-	178	1	Intergenic	novelGene_20945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTATGAGCTTGCCTAT	NA	False	NA	NA	False	NA	NA	NA	148876538	148876360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148876400_148876500
ES.25106.1	chr4	+	4235	11	ISM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	-34	4608	-34	10	5prime_fragment	FALSE	canonical	1	2	junction_1	4.17612260356422	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTAGTGCCTTGGGGC	NA	False	NA	NA	False	AATAAA	-33	NA	148888851	149024978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
ES.25106.10	chr4	+	4308	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141396	0	-1177	0	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149030281	149039346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
ES.25106.11	chr4	+	4157	4	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	142315	0	-258	0	3prime_fragment	FALSE	canonical	2	3	junction_2	2.05480466765633	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149031200	149039346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149031619_149032980_149033133_149033249_149033392_149035901
ES.25106.12	chr4	+	3741	3	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	144093	0	1520	0	3prime_fragment	FALSE	canonical	2	3	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149032978	149039346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149033133_149033249_149033392_149035901
ES.25106.2	chr4	+	4356	16	FSM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	-7	0	-7	0	multi-exon	FALSE	canonical	1	2	junction_1	4.01441845795323	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACAGCTGTCCTCCCTC	NA	False	NA	22	True	AATAAA	-32	NA	148888878	149029586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714
ES.25106.3	chr4	+	6287	21	FSM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	-4	1643	-4	675	multi-exon	FALSE	canonical	0	0	junction_16	3.87653195524041	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTACAGTATTTTTCCTG	NA	False	NA	NA	False	AAGAAA	-1	NA	148888881	149037703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714_149029054_149030479_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
ES.25106.4	chr4	+	4176	17	NNC	ENSMUSG00000028977.18	novel	4349	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.22742164327146	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACAGCTGTCCTCCCT	NA	False	NA	21	True	AATAAA	-31	NA	148888884	149029585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013604_149013776_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714
ES.25106.5	chr4	+	7303	21	FSM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	33	590	-3	-590	multi-exon	FALSE	canonical	0	0	junction_16	3.87653195524041	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	148888918	149038756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714_149029054_149030479_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
ES.25106.6	chr4	+	4052	9	NIC	ENSMUSG00000028977.18	novel	3014	6	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.29389100932942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGCTCTCTGTAAGCT	NA	False	NA	NA	False	AATAAA	-18	NA	148985608	149024963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_148985771_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
ES.25106.7	chr4	+	3943	8	NNC	ENSMUSG00000028977.18	novel	3014	6	NA	NA	7291	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.83325938999964	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTGCAGCTCTCT	NA	False	NA	NA	False	AATAAA	-11	NA	148992896	149024956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148992996_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
ES.25106.8	chr4	+	4047	8	NNC	ENSMUSG00000028977.18	novel	3014	6	NA	NA	9459	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.32364170012045	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGCAGCTCTCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	148995064	149024958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_148995266_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
ES.25106.9	chr4	+	7594	17	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	124565	0	-4120	0	3prime_fragment	FALSE	canonical	0	0	junction_12	3.6721077053921	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149013450	149039346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714_149029054_149030479_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
ES.25107.1	chr4	+	158	1	Intergenic	novelGene_20948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	149077177	149077335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149077200_149077300
ES.25108.1	chr4	+	2293	1	Intergenic	novelGene_20949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGCTGTGGTACTGAAT	NA	False	NA	NA	False	NA	NA	NA	149083772	149086065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149083800_149086100
ES.25109.1	chr4	+	186	1	Intergenic	novelGene_20951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGATCTTCACAGAAC	2550	False	NA	NA	False	NA	NA	NA	149152544	149152730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149152500_149152700
ES.2511.1	chr10	+	181	1	Intergenic	novelGene_1904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAACATAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	27449060	27449241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_27449100_27449200
ES.25110.1	chr4	+	151	1	Intergenic	novelGene_20952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACATATATTATTT	NA	False	NA	NA	False	NA	NA	NA	149164415	149164566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149164400_149164600
ES.25111.1	chr4	+	2569	7	NNC	ENSMUSG00000028974.14	novel	2457	6	NA	NA	-14835	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7464592033326	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	6941	False	NA	8	True	AATAAA	-18	NA	149173767	149205106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149173901_149188625_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ES.25111.2	chr4	+	162	1	Intergenic	novelGene_20953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	149177114	149177276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149177100_149177300
ES.25111.3	chr4	+	3610	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	5	-1780	5	3	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCTTTGTTTGTCAGA	NA	False	NA	9	True	AATAAA	-19	NA	149188607	149205107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
ES.25111.4	chr4	+	2442	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	17	-2	17	2	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	8	True	AATAAA	-18	NA	149188619	149205106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ES.25111.5	chr4	+	2506	6	NNC	ENSMUSG00000028974.14	novel	2457	6	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.7608139294157	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTTTGTTTGTCAG	NA	False	NA	8	True	AATAAA	-18	NA	149188627	149205106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202453_149203535
ES.25111.6	chr4	+	2359	7	NNC	ENSMUSG00000028974.14	novel	2457	6	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.7464592033326	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGCTGCCTTTGTTTGT	NA	False	NA	5	True	AATAAA	-15	NA	149188628	149205103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149188844_149190608_149190651_149190721_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ES.25112.1	chr4	+	125	1	Antisense	novelGene_ENSMUSG00000073705.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	149211772	149211897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_149211800_149211900
ES.25113.1	chr4	+	158	1	Intergenic	novelGene_20960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	149260205	149260363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149260200_149260400
ES.25114.1	chr4	+	157	1	Intergenic	novelGene_20961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	149273346	149273503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149273300_149273500
ES.25115.1	chr4	+	199	2	Antisense	novelGene_ENSMUSG00000063077.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTACTGACTCATTCT	NA	False	NA	7	True	NA	NA	NA	149279717	149293441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_149279758_149293282
ES.25115.2	chr4	+	151	1	Intergenic	novelGene_20963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149292035	149292186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149292000_149292200
ES.25115.3	chr4	+	200	1	Intergenic	novelGene_20964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTACTGACTCATTCTC	NA	False	NA	8	True	NA	NA	NA	149293242	149293442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149293200_149293400
ES.25116.1	chr4	+	176	1	Intergenic	novelGene_20965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTAACTTCCTAAG	4715	False	NA	NA	False	NA	NA	NA	149328702	149328878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149328700_149328900
ES.25117.1	chr4	+	178	1	Intergenic	novelGene_20966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAGAAACAGT	1807	False	NA	NA	False	NA	NA	NA	149336471	149336649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149336500_149336600
ES.25118.1	chr4	+	153	1	Intergenic	novelGene_20967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATATATAT	NA	False	NA	NA	False	NA	NA	NA	149364546	149364699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149364500_149364700
ES.25119.1	chr4	+	183	1	Intergenic	novelGene_20968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	149378364	149378547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149378400_149378500
ES.2512.1	chr10	+	162	1	Intergenic	novelGene_1905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	27751749	27751911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_27751700_27751900
ES.25120.1	chr4	-	190	1	Intergenic	novelGene_20946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	148924637	148924447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148924400_148924600
ES.25121.1	chr4	-	190	1	Intergenic	novelGene_20947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	148953391	148953201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_148953200_148953400
ES.25122.1	chr4	-	1512	11	Fusion	ENSMUSG00000086606.2_ENSMUSG00000028975.17	novel	2006	9	NA	NA	-11	1	multi-exon	FALSE	canonical	3	45	junction_1	151.923796687682	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTCGTTGTGGACAAA	NA	False	NA	-3	True	AATAAA	-15	NA	149184296	149031947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149032363_149033223_149033365_149046004_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ES.25122.10	chr4	-	1903	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	149.853125371723	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTGGCTCTGACCTC	NA	False	NA	-15	True	AATAAA	-17	NA	149184281	149044994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149184228
ES.25122.11	chr4	-	4537	5	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	126337	6	126270	-6	3prime_fragment	FALSE	canonical	3	414	junction_1	11.6054943884352	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTCCTGGCTCTGAC	NA	False	NA	-18	True	AATAAA	-14	NA	149057996	149044997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006
ES.25122.12	chr4	-	178	1	Antisense	novelGene_ENSMUSG00000086740.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGGTGGGTTCT	NA	False	NA	NA	False	NA	NA	NA	149067680	149067502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_149067500_149067700
ES.25122.13	chr4	-	5118	1	Intergenic	novelGene_20950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGGAAAGAAA	6705	False	NA	NA	False	TATAAA	-33	NA	149151368	149146250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149146200_149151400
ES.25122.2	chr4	-	1626	12	Fusion	ENSMUSG00000086606.2_ENSMUSG00000028975.17	novel	2006	9	NA	NA	-1	-2	multi-exon	FALSE	canonical	0	0	junction_10	195.178917707204	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACAGCTCGTTGTGGAC	NA	False	NA	-6	True	AATAAA	-12	NA	149184274	149031950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149032363_149033223_149033365_149046004_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149176098_149176238_149184228
ES.25122.3	chr4	-	6381	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	74	-4449	7	4449	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGTTTTATCCCATA	NA	False	NA	NA	False	AATAAA	-16	NA	149184259	149040542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ES.25122.4	chr4	-	3604	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	391	junction_5	18.9951658726796	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184284	149044991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ES.25122.5	chr4	-	2013	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	-9	2	-9	-2	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGCTCTGACCTCG	NA	False	NA	-14	True	AATAAA	-18	NA	149184342	149044993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ES.25122.6	chr4	-	1869	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	146.864785793336	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGCTCTGACCTCG	NA	False	NA	-14	True	AATAAA	-18	NA	149184284	149044993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ES.25123.1	chr4	-	224	2	Intergenic	novelGene_20954	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	504	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTGTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	149284786	149187248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149187374_149284687
ES.25123.10	chr4	-	2353	5	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	412	5	NA	NA	2	-154	intron_retention	FALSE	canonical	3	10	junction_2	186.097420723663	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCTTCTTATGTCAG	NA	False	NA	-1	True	AATAAA	-18	NA	149222032	149209644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149211603_149211738_149211895_149216095_149216130_149216734_149216840_149221932
ES.25123.11	chr4	-	5505	2	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	677	2	NA	NA	-619	-155	intron_retention	FALSE	canonical	2	5	junction_1	0	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTTCTTCTTATGTCA	NA	False	NA	-2	True	AATAAA	-17	NA	149215532	149209645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312
ES.25123.12	chr4	-	3662	6	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	689	5	NA	NA	2	-157	intron_retention	FALSE	canonical	2	5	junction_1	189.385321500902	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTTTCTTCTTATGT	NA	False	NA	-4	True	AATAAA	-15	NA	149222032	149209647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
ES.25123.13	chr4	-	3527	7	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	6	-159	multi-exon	FALSE	canonical	2	5	junction_1	181.474209982821	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGAGCTTTCTTCTTAT	NA	False	NA	-6	True	AATAAA	-13	NA	149222016	149209649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149211603_149211738_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.14	chr4	-	3505	8	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	10	-159	multi-exon	TRUE	canonical	0	0	junction_3	192.016899766449	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGAGCTTTCTTCTTAT	NA	False	NA	-6	True	AATAAA	-13	NA	149222076	149209649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149211603_149211738_149212784_149212865_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.15	chr4	-	1984	6	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	412	5	NA	NA	2	-160	multi-exon	FALSE	canonical	2	5	junction_1	192.971915055015	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGGAGCTTTCTTCTTA	NA	False	NA	-7	True	AATAAA	-12	NA	149222032	149209650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149211603_149211738_149211895_149216095_149216130_149216715_149216840_149221932
ES.25123.16	chr4	-	970	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	32	108	-20	-108	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGGTCCCTGGGAATG	NA	False	NA	90	True	NA	NA	NA	149222054	149212762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.17	chr4	-	882	5	NNC	ENSMUSG00000073705.11	novel	689	5	NA	NA	0	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	181.213099692048	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCTGCTGTGGCTTCAGG	NA	False	NA	50	True	AATAAA	-21	NA	149222034	149212802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216831_149221932
ES.25123.18	chr4	-	2324	4	NIC	ENSMUSG00000073705.11	novel	1110	5	NA	NA	2	-151	intron_retention	FALSE	canonical	3	344	junction_2	45.3455865793158	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTGCTGTGGCTTC	NA	False	NA	47	True	AATAAA	-18	NA	149222032	149212805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149213386_149214609_149216130_149216715_149216840_149221932
ES.25123.19	chr4	-	890	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	-10	-191	-2	-151	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTGCTGTGGCTTC	NA	False	NA	47	True	AATAAA	-18	NA	149222036	149212805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
ES.25123.2	chr4	-	178	1	Intergenic	novelGene_20955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	149197422	149197244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149197200_149197400
ES.25123.20	chr4	-	2844	3	NIC	ENSMUSG00000073705.11	novel	1110	5	NA	NA	-4	119	intron_retention	FALSE	canonical	3	396	junction_1	29.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTTCAGGTCTCAGC	NA	False	NA	-25	True	AATAAA	-28	NA	149222038	149212877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149213386_149214609_149216840_149221932
ES.25123.21	chr4	-	832	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	48	230	-4	112	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTGTGGCTTCAGG	NA	False	NA	-32	True	AATAAA	-21	NA	149222038	149212884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.22	chr4	-	873	5	FSM	ENSMUSG00000073705.11	ENSMUST00000176124.8	518	5	-10	-345	2	109	multi-exon	FALSE	canonical	3	8	junction_4	158.113883008419	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGCTGCTGTGGCTTC	NA	False	NA	-35	True	AATAAA	-18	NA	149222032	149212887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216890_149221932
ES.25123.23	chr4	-	901	5	NIC	ENSMUSG00000073705.11	novel	689	5	NA	NA	7	109	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	178.983763230076	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGCTGCTGTGGCTTC	NA	False	NA	-35	True	AATAAA	-18	NA	149222079	149212887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216890_149221932
ES.25123.24	chr4	-	2223	4	NIC	ENSMUSG00000073705.11	novel	689	5	NA	NA	2	109	intron_retention	FALSE	canonical	3	47	junction_2	180.045056089364	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGCTGCTGTGGCTTC	NA	False	NA	-35	True	AATAAA	-18	NA	149222032	149212887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149213386_149214609_149216130_149216734_149216840_149221932
ES.25123.25	chr4	-	875	5	NNC	ENSMUSG00000073705.11	novel	689	5	NA	NA	0	107	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	178.663090760235	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCAGCTGCTGTGGCT	NA	False	NA	-37	True	AATAAA	-16	NA	149222026	149212889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149213386_149214609_149214677_149216095_149216130_149216655_149216840_149221932
ES.25123.26	chr4	-	981	5	NNC	ENSMUSG00000073705.11	novel	1110	5	NA	NA	-616	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	161.554944214035	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCAGCTGCTGTGGCT	NA	False	NA	-37	True	AATAAA	-16	NA	149217708	149212889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149217448
ES.25123.27	chr4	-	3507	3	FSM	ENSMUSG00000073705.11	ENSMUST00000105695.2	544	3	-41	-2922	11	107	multi-exon	FALSE	canonical	3	344	junction_1	55.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCAGCTGCTGTGGCT	NA	False	NA	-37	True	AATAAA	-16	NA	149222075	149212889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149216130_149216715_149216840_149221932
ES.25123.28	chr4	-	2229	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	-12	1	-12	-1	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCTTTGTTTCTTCTC	NA	False	NA	-9	True	AATAAA	-15	NA	149251176	149234448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.29	chr4	-	2268	13	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	98.9776910891204	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251139	149234449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244438_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.3	chr4	-	341	2	Intergenic	novelGene_20956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	356	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACCACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	149254506	149197552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149197696_149254308
ES.25123.30	chr4	-	5525	10	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	318	junction_7	23.1745923026719	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251129	149234449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.31	chr4	-	2922	4	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	10916	2	4208	-2	intron_retention	FALSE	canonical	3	359	junction_3	11.8977121983832	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	7073	False	NA	-10	True	AATAAA	-14	NA	149240248	149234449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320
ES.25123.33	chr4	-	2590	13	NNC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	116.67321410199	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTCTTTGTTTCTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	149251128	149234449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244996_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.34	chr4	-	4863	11	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	21	-3	intron_retention	FALSE	canonical	3	318	junction_8	22.1801713248568	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTTGTTTCTTC	NA	False	NA	-11	True	AATAAA	-13	NA	149251143	149234450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.37	chr4	-	4173	12	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	4	-4	intron_retention	FALSE	canonical	3	293	junction_7	27.4361768774896	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTTTGTTTCTT	NA	False	NA	-12	True	AATAAA	-12	NA	149251160	149234451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.38	chr4	-	4477	12	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	0	-4	intron_retention	FALSE	canonical	1	98	junction_6	75.3457046327896	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTTTGTTTCTT	NA	False	NA	-12	True	AATAAA	-12	NA	149251117	149234451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.4	chr4	-	173	1	Intergenic	novelGene_20957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7001	False	NA	NA	False	NA	NA	NA	149207176	149207003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149207000_149207200
ES.25123.41	chr4	-	4804	11	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	293	junction_7	28.7548256819616	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGGCTTCTTTGTTTC	NA	False	NA	-14	True	AATAAA	-10	NA	149251118	149234453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149244586_149245291_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.42	chr4	-	1674	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	37	507	-10	-507	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCCACCTCCGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	149251127	149234954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ES.25123.43	chr4	-	3734	1	NIC	ENSMUSG00000028961.16	novel	2218	13	NA	NA	4	-1070	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTCAGTAAGAAAAGTT	2869	False	NA	NA	False	AAAACA	-17	NA	149244452	149240718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149240700_149244500
ES.25123.44	chr4	-	9937	47	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-61	8721	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8328880954771	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAAAGAAAGCA	7178	False	NA	NA	False	NA	NA	NA	149392211	149252054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149252086_149260778_149265268_149265940_149266060_149266264_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.45	chr4	-	548	1	Intergenic	novelGene_20958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	149253809	149253261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149253300_149253800
ES.25123.46	chr4	-	332	1	Intergenic	novelGene_20959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAACTATGGCTGAAGA	NA	False	NA	NA	False	AAAACA	-5	NA	149254506	149254174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149254200_149254500
ES.25123.47	chr4	-	9938	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-88	3	combination_of_known_splicesites	FALSE	canonical	3	47	junction_22	22.5611268434102	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTTTAGTCTTTTGT	7151	False	NA	1	True	AATAAA	-24	NA	149392238	149260772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.48	chr4	-	10186	47	FSM	ENSMUSG00000063077.16	ENSMUST00000055647.15	5992	47	-277	-3917	-90	0	multi-exon	FALSE	canonical	2	6	junction_23	26.5390624108764	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGTGCTTTAGTCTTT	7149	False	NA	-2	True	AATAAA	-21	NA	149392240	149260775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.5	chr4	-	4138	6	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_1	160.911901362205	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGGGCTTCCGTCCCCT	NA	False	NA	NA	False	AATAAA	-32	NA	149222032	149209490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149212760_149212841_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.50	chr4	-	9963	46	NIC	ENSMUSG00000063077.16	novel	10233	49	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_34	25.0304900491134	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGTGCTTTAGTCTTT	7201	False	NA	-2	True	AATAAA	-21	NA	149392188	149260775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.51	chr4	-	7225	25	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	108	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.0644859343003	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCGTGCTTTAGTCTT	6147	False	NA	-3	True	AATAAA	-20	NA	149307867	149260776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149264890_149264958_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686
ES.25123.53	chr4	-	9925	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	28.9770790645143	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCGTGCTTTAGTCTT	7290	False	NA	-3	True	AATAAA	-20	NA	149392099	149260776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149265268_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.54	chr4	-	9597	45	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_40	24.215831768999	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCGTGCTTTAGTCT	7235	False	NA	-4	True	AATAAA	-19	NA	149392154	149260777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354358_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.55	chr4	-	9881	46	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_41	27.7093022665452	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCGTGCTTTAGTCT	7200	False	NA	-4	True	AATAAA	-19	NA	149392189	149260777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354358_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.57	chr4	-	10211	47	NIC	ENSMUSG00000063077.16	novel	10233	49	NA	NA	-40	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_23	28.4870215532517	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGCGTGCTTTAGTC	7199	False	NA	-5	True	AATAAA	-18	NA	149392190	149260778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.6	chr4	-	4161	6	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	-21	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	160.911901362205	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATTGGGCTTCCGTCCC	NA	False	NA	NA	False	AATAAA	-30	NA	149222055	149209492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149212768_149212847_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.63	chr4	-	5730	47	FSM	ENSMUSG00000063077.16	ENSMUST00000055647.15	5992	47	-217	479	-30	-479	multi-exon	FALSE	canonical	2	6	junction_23	26.5390624108764	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTTTGTGATTCTTGA	7209	False	NA	NA	False	GATAAA	-17	NA	149392180	149265171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.67	chr4	-	172	1	Intergenic	novelGene_20962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149275076	149274904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149274900_149275100
ES.25123.68	chr4	-	5911	28	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	-40	-4064	combination_of_known_splicesites	FALSE	canonical	3	47	junction_4	24.6206332776068	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAATAAAACCT	7199	False	NA	NA	False	NA	NA	NA	149392190	149295250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.69	chr4	-	4526	27	NNC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	2	3088	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	28.8181659095532	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTGGGTTGTTT	7242	False	NA	NA	False	AATAAA	-13	NA	149392147	149296340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354358_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.7	chr4	-	3758	7	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	186.512734149709	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCATTGGGCTTCCGTC	NA	False	NA	NA	False	AATAAA	-28	NA	149222038	149209494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149212760_149212841_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25123.70	chr4	-	3213	27	NIC	ENSMUSG00000063077.16	novel	10233	49	NA	NA	-39	1239	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	28.5815556862076	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTCGTTCTGGTCTGT	7200	False	NA	NA	False	NA	NA	NA	149392189	149298189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.71	chr4	-	7164	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-170	-3	-100	3	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCATGATCTTTAAGTGT	7139	False	NA	NA	False	AATAAA	-19	NA	149392250	149318187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.72	chr4	-	7232	21	NIC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-91	2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	27.3957569707427	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATGATCTTTAAGTG	7148	False	NA	NA	False	AATAAA	-18	NA	149392241	149318188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.73	chr4	-	7143	22	NIC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-39	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	34.8829594741903	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCATGATCTTTAAGT	7200	False	NA	NA	False	AATAAA	-17	NA	149392189	149318189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149345616_149345659_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.74	chr4	-	7130	21	NNC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.7923600977759	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7199	False	NA	NA	False	AATAAA	-16	NA	149392190	149318190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350679_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.76	chr4	-	7125	21	NNC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-39	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8795285892151	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCCTTGGCATGATC	7200	False	NA	NA	False	AATAAA	-10	NA	149392189	149318196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149322972_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.78	chr4	-	7020	22	NNC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	28.2561975221844	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCCTTGGCATGATC	7210	False	NA	NA	False	AATAAA	-10	NA	149392179	149318196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885_149391982_149392045
ES.25123.79	chr4	-	2929	1	ISM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	70143	818	10499	-818	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATATTCCTAGGTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	149321937	149319008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149319000_149321900
ES.25123.8	chr4	-	3235	1	Genic_Genomic	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	NA	NA	NA	NA	-1657	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTCTTATGTCAGCT	1300	False	NA	1	True	AATAAA	-20	NA	149212877	149209642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_149209600_149212900
ES.25123.80	chr4	-	5905	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-79	1165	-9	-1165	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCTAGCAGTATCTTTT	7230	False	NA	NA	False	ATTAAA	-42	NA	149392159	149319355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.81	chr4	-	5344	21	NNC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-42	-1758	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	28.2685337433691	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCCAACATGTTTTTT	7197	False	NA	NA	False	AAGAAA	-24	NA	149392192	149319948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355348_149358233_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.82	chr4	-	4958	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	-99	2132	-29	-2132	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGACAAGGTGGATTT	7210	False	NA	NA	False	AATAAA	-38	NA	149392179	149320322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.83	chr4	-	3077	1	NIC	ENSMUSG00000063077.16	novel	10434	50	NA	NA	-10229	9338	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATAGTGGTATGTAATT	9049	False	NA	NA	False	NA	NA	NA	149342665	149339588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149339600_149342700
ES.25123.84	chr4	-	2491	5	NIC	ENSMUSG00000063077.16	novel	10233	49	NA	NA	0	-5766	intron_retention	FALSE	canonical	3	111	junction_2	6.37867541108654	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGTCAAAAAAAAAAA	7240	False	NA	NA	False	NA	NA	NA	149392149	149354692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149355353_149358237_149359553_149361303_149361381_149375758_149375934_149391885
ES.25123.85	chr4	-	3582	3	NNC	ENSMUSG00000063077.16	novel	587	2	NA	NA	-64	3124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAGGAAGGCTGTTA	7175	False	NA	NA	False	NA	NA	NA	149392214	149372458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149372962_149373183_149375934_149391885
ES.25123.9	chr4	-	3575	7	Fusion	ENSMUSG00000073705.11_ENSMUSG00000028971.5	novel	1110	5	NA	NA	2	-152	multi-exon	FALSE	canonical	1	1	junction_3	193.500574216776	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTCTTATGTCAGCT	NA	False	NA	1	True	AATAAA	-20	NA	149222032	149209642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149209931_149210312_149211603_149211738_149213411_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ES.25124.1	chr4	+	220	1	Intergenic	novelGene_20969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAATTTTATAA	NA	False	NA	NA	False	NA	NA	NA	149401220	149401440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149401200_149401400
ES.25125.1	chr4	+	242	1	Intergenic	novelGene_20972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATGTTCCGTACT	8210	False	NA	NA	False	NA	NA	NA	149454909	149455151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149454900_149455200
ES.25126.1	chr4	+	356	1	Intergenic	novelGene_20973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGTAAAAAAAAAAATAAATA	343	False	NA	NA	False	AAAAAG	-17	NA	149497718	149498074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149497700_149498100
ES.25127.10	chr4	-	5390	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_8	57.2322813075684	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCCTGTGAGTCGTC	NA	False	NA	-5	True	AATAAA	-20	NA	149511051	149412875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432607_149435179_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.11	chr4	-	5449	28	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	14	-3	intron_retention	FALSE	non_canonical	0	0	junction_8	56.2215878556902	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCCTGTGAGTCGTC	NA	False	NA	-5	True	AATAAA	-20	NA	149511074	149412875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432535_149432576_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.14	chr4	-	3750	19	NNC	ENSMUSG00000028960.21	novel	3407	26	NA	NA	-14133	1	intron_retention	FALSE	canonical	0	0	junction_18	65.3019813285332	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGCCTCCTGTGAGTCG	4682	False	NA	-7	True	AATAAA	-18	NA	149450296	149412877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149450156
ES.25127.15	chr4	-	4453	12	NIC	ENSMUSG00000028960.21	novel	3407	26	NA	NA	-5940	1	intron_retention	FALSE	canonical	3	223	junction_4	25.5779476299151	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGCCTCCTGTGAGTCG	4169	False	NA	-7	True	AATAAA	-18	NA	149442103	149412877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081
ES.25127.23	chr4	-	5559	28	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_5	73.325326910485	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAGCCTCCTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	149511083	149412879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149420162_149420226_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.24	chr4	-	5608	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_1	57.1646252388505	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAGCCTCCTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	149511074	149412879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414526_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.26	chr4	-	5382	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	131	113	13	-107	multi-exon	FALSE	canonical	3	203	junction_22	27.7325828917206	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCAGAAACAGACTT	NA	False	NA	-115	True	CATAAA	-17	NA	149511075	149412985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.27	chr4	-	5230	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	120	276	2	45	multi-exon	FALSE	canonical	3	203	junction_22	27.7325828917206	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAATCTGTCTGCTTG	NA	False	NA	NA	False	AAGAAA	-1	NA	149511086	149413148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.28	chr4	-	4667	26	NIC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	1	-332	combination_of_known_junctions	FALSE	canonical	1	2	junction_25	58.0073650496211	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTTTTTTCTTTT	NA	False	NA	1	True	AATAAA	-28	NA	149511087	149413525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149510338
ES.25127.29	chr4	-	4879	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	94	653	-24	-332	multi-exon	FALSE	canonical	3	203	junction_22	27.7325828917206	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTTTTTTCTTTT	NA	False	NA	1	True	AATAAA	-28	NA	149511112	149413525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.30	chr4	-	4961	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	15	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.1646252388505	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTTTTTTCTTTT	NA	False	NA	1	True	AATAAA	-28	NA	149511073	149413525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414526_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.31	chr4	-	4338	25	NNC	ENSMUSG00000028960.21	novel	4943	29	NA	NA	3778	-332	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	91.1539353541884	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTTTTTTTTCTTTT	NA	False	NA	1	True	AATAAA	-28	NA	149468341	149413525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149464490_149464892_149464987_149465229_149465639_149465869_149468194
ES.25127.32	chr4	-	4827	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	14	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	56.891727334062	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCAGTTTTTTTTTC	NA	False	NA	-3	True	AATAAA	-24	NA	149511074	149413529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469660_149471537_149471674_149483055_149483243_149510338
ES.25127.34	chr4	-	4612	26	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	13	-340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.7975778039184	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTTCAGTTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	149511075	149413533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427447_149432444_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.36	chr4	-	4822	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	14	-340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	74.2766697465567	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTTCAGTTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	149511074	149413533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415780_149415955_149419568_149419761_149421841_149421977_149427345_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.38	chr4	-	6691	26	NIC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	-191	-340	intron_retention	FALSE	canonical	3	203	junction_21	27.3392318838697	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTTCAGTTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	149510864	149413533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.39	chr4	-	4355	15	NIC	ENSMUSG00000028960.21	novel	3407	26	NA	NA	-8650	-340	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	72.7506574765157	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTTCAGTTTTTT	1459	False	NA	-7	True	AATAAA	-20	NA	149444813	149413533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149420162_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734
ES.25127.4	chr4	-	4914	26	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	-186	0	intron_retention	TRUE	non_canonical	0	0	junction_8	75.8213690195581	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTGAGTCGTCTTT	NA	False	NA	-2	True	AATAAA	-23	NA	149510859	149412872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432476_149435148_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149510338
ES.25127.41	chr4	-	4478	26	NIC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	-183	-342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	57.9430617071621	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGAATTTCAGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	149510856	149413535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.42	chr4	-	4381	25	NIC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	17	-342	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	77.1428936562965	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGAATTTCAGTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	149511040	149413535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149468194_149468340_149469581_149469670_149471537_149471674_149510338
ES.25127.43	chr4	-	4580	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	188	-343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.0215364691427	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTTGAATTTCAGTTT	NA	False	NA	-10	True	AATAAA	-17	NA	149510869	149413536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419716_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.44	chr4	-	4654	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	108	864	-10	219	multi-exon	FALSE	canonical	3	203	junction_22	27.7325828917206	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTACTTGCACTGCTGTG	NA	False	NA	NA	False	AATAGA	-41	NA	149511098	149413736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.45	chr4	-	182	1	Intergenic	novelGene_20970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGGTTGGTTTTTTT	9505	False	NA	0	True	NA	NA	NA	149417115	149416933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149416900_149417100
ES.25127.46	chr4	-	4289	4	NNC	ENSMUSG00000028960.21	novel	277	2	NA	NA	132	4270	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.322534718549	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAACCCAAAAAT	9563	False	NA	NA	False	NA	NA	NA	149436031	149430915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149432916_149432999_149434801_149434842_149435214_149435914
ES.25127.47	chr4	-	162	1	Intergenic	novelGene_20971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	4943	False	NA	NA	False	NA	NA	NA	149431887	149431725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149431700_149431900
ES.25127.48	chr4	-	2812	10	FSM	ENSMUSG00000028960.21	ENSMUST00000084123.11	2030	10	17	-799	-14	799	multi-exon	FALSE	canonical	3	203	junction_5	30.8796948747159	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCCCCAACAGATCA	NA	False	NA	NA	False	NA	NA	NA	149511071	149449058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.49	chr4	-	1876	2	FSM	ENSMUSG00000028960.21	ENSMUST00000173005.2	621	2	-400	-855	15	855	multi-exon	FALSE	canonical	3	264	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTTGTCTTTCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	149511073	149482101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149483243_149510338
ES.25127.5	chr4	-	5951	30	NNC	ENSMUSG00000028960.21	novel	5081	30	NA	NA	167	-1	intron_retention	TRUE	non_canonical	0	0	junction_21	93.7781301435594	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTGTGAGTCGTCTT	NA	False	NA	-3	True	AATAAA	-22	NA	149510890	149412873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149464490_149464796_149464843_149465061_149465108_149465229_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.50	chr4	-	1045	2	FSM	ENSMUSG00000028960.21	ENSMUST00000173005.2	621	2	-411	-13	4	13	multi-exon	FALSE	canonical	3	264	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTGTTCATTTGATA	NA	False	NA	NA	False	ATTAAA	-43	NA	149511084	149482943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149483243_149510338
ES.25127.6	chr4	-	5856	29	NNC	ENSMUSG00000028960.21	novel	4943	29	NA	NA	166	-2	intron_retention	TRUE	non_canonical	0	0	junction_8	84.843756459766	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTGTGAGTCGTCT	NA	False	NA	-4	True	AATAAA	-21	NA	149510891	149412874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149434434_149434801_149434842_149435024_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ES.25127.7	chr4	-	4878	28	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_25	73.4811641271522	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTGTGAGTCGTCT	NA	False	NA	-4	True	AATAAA	-21	NA	149511072	149412874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471671_149483055_149483243_149510338_149510408_149511016
ES.25127.9	chr4	-	5482	27	NNC	ENSMUSG00000028960.21	novel	5626	27	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_23	57.2694244972701	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCCTGTGAGTCGTC	NA	False	NA	-5	True	AATAAA	-20	NA	149511074	149412875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468327_149469577_149469670_149471537_149471674_149483055_149483243_149510338
ES.25128.1	chr4	-	156	1	Intergenic	novelGene_20974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATTAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	149514910	149514754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149514800_149514900
ES.25129.1	chr4	-	153	1	Intergenic	novelGene_20975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAGTGCACCAAACC	NA	False	NA	NA	False	NA	NA	NA	149528460	149528307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149528300_149528500
ES.2513.1	chr10	+	176	1	Intergenic	novelGene_1906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27787271	27787447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_27787300_27787400
ES.25130.1	chr4	+	210	1	Intergenic	novelGene_20976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149534798	149535008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149534800_149535000
ES.25131.1	chr4	-	174	1	Intergenic	novelGene_20977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	149540212	149540038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149540000_149540200
ES.25132.1	chr4	+	599	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-32	-189	-32	189	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTAGCTACTTCCTAA	1882	False	NA	NA	False	ATTAAA	-35	NA	149541753	149542352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149541800_149542400
ES.25133.1	chr4	+	228	1	Antisense	novelGene_ENSMUSG00000028992.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTGTGCGGCAGAGC	7614	False	NA	NA	False	NA	NA	NA	149552733	149552961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_149552700_149553000
ES.25134.1	chr4	+	172	1	Antisense	novelGene_ENSMUSG00000028992.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAACAACAACAAA	650	False	NA	NA	False	NA	NA	NA	149553841	149554013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_149553800_149554000
ES.25135.1	chr4	+	177	1	Intergenic	novelGene_20978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAGAAAAAAAA	2534	False	NA	NA	False	NA	NA	NA	149555725	149555902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149555700_149555900
ES.25136.1	chr4	+	4530	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-22	3210	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTCTGATTGCAG	NA	False	NA	19	True	AATAAA	-20	NA	149569663	149584335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.10	chr4	+	1753	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	20	-3	intron_retention	FALSE	canonical	1	1	junction_1	68.8257189707215	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569716	149581122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149569731_149569825_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.12	chr4	+	5058	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-29	-3212	25	3212	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGTCTGATTGCAGTA	NA	False	NA	21	True	AATAAA	-22	NA	149569721	149584337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.13	chr4	+	4417	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	26	2949	intron_retention	FALSE	non_canonical	0	0	junction_8	78.423131154016	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGGCTAAAGCAAAAATA	NA	False	NA	NA	False	AATAAA	-21	NA	149569722	149584074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581614_149581725
ES.25136.14	chr4	+	4668	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-26	3211	intron_retention	FALSE	non_canonical	0	0	junction_8	82.5468616907996	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGATTGCAGT	NA	False	NA	20	True	AATAAA	-21	NA	149569724	149584336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581613_149581729
ES.25136.15	chr4	+	3252	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-26	1804	intron_retention	FALSE	non_canonical	0	0	junction_8	78.423131154016	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149569724	149582929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581596_149581725
ES.25136.16	chr4	+	3035	6	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	163	junction_2	15.2236657871881	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569724	149581122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149570457_149571208_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.17	chr4	+	3268	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-26	1806	intron_retention	FALSE	non_canonical	0	0	junction_8	78.423131154016	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149569724	149582931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581610_149581725
ES.25136.18	chr4	+	3696	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-26	-1853	-26	1853	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTGAATTCCTATTT	NA	False	NA	NA	False	NA	NA	NA	149569724	149582978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.19	chr4	+	5060	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-26	3603	intron_retention	FALSE	non_canonical	0	0	junction_8	82.5468616907996	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCTCCATTGTGATG	NA	False	NA	NA	False	NA	NA	NA	149569724	149584728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581612_149581728
ES.25136.2	chr4	+	4394	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-7	3207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	74.7185343472421	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACATGGTGTCTGATTG	NA	False	NA	16	True	AATAAA	-17	NA	149569678	149584332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581608_149581725
ES.25136.20	chr4	+	1574	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	32	junction_1	58.2405287035881	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569725	149581122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149570050_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.22	chr4	+	4930	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-20	3211	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGATTGCAGT	NA	False	NA	20	True	AATAAA	-21	NA	149569730	149584336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581608_149581725
ES.25136.23	chr4	+	4786	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-20	-2949	-20	2949	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGGCTAAAGCAAAAATA	NA	False	NA	NA	False	AATAAA	-21	NA	149569730	149584074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.24	chr4	+	3556	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-20	1833	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569730	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581612_149581725
ES.25136.26	chr4	+	5260	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-16	-3427	-16	3427	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATTCCCAAGAACAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	149569734	149584552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.27	chr4	+	3365	3	ISM	ENSMUSG00000028990.14	ENSMUST00000124413.8	359	4	49	-2467	-16	2439	3prime_fragment	FALSE	canonical	3	198	junction_1	4	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	149569734	149575046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149570457_149571208_149571318_149572512
ES.25136.28	chr4	+	3543	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	1	1833	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569751	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581620_149581725
ES.25136.3	chr4	+	3020	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-7	1833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	74.7185343472421	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569678	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581608_149581725
ES.25136.30	chr4	+	3510	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	10	1833	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569760	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581596_149581725
ES.25136.31	chr4	+	3252	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	11	1566	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTGAGTGATGCTT	NA	False	NA	NA	False	NA	NA	NA	149569761	149582691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581606_149581725
ES.25136.32	chr4	+	1962	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-11	732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.8539185895383	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTCTTCTTAACT	NA	False	NA	NA	False	NA	NA	NA	149569778	149581857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149569874_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581608_149581725
ES.25136.33	chr4	+	2791	4	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-9	2443	intron_retention	FALSE	non_canonical	0	0	junction_3	95.2797051959242	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	149569780	149575050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149573260_149573791
ES.25136.35	chr4	+	4906	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	-6	3511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.5468616907996	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTTCAATGTTTCA	NA	False	NA	NA	False	AAAAAG	-16	NA	149569783	149584636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570050_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581606_149581725
ES.25136.36	chr4	+	4477	2	ISM	ENSMUSG00000028990.14	ENSMUST00000124413.8	359	4	98	-2433	-6	2405	intron_retention	FALSE	canonical	3	198	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149569783	149575012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149570457_149571208
ES.25136.37	chr4	+	5730	7	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	25	1833	intron_retention	FALSE	non_canonical	0	0	junction_6	73.0045660672445	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569814	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149581602_149581723
ES.25136.38	chr4	+	3395	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	94	1833	intron_retention	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569883	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581602_149581723
ES.25136.39	chr4	+	2976	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	523	1833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	69.1685312427965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149570312	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581614_149581725
ES.25136.41	chr4	+	2943	9	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	526	23396	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	84.8539185895383	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAATAATATAA	NA	False	NA	NA	False	NA	NA	NA	149570315	149604521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581612_149581725_149582862_149604452
ES.25136.42	chr4	+	2719	6	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	2721	1833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.2388503280571	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149572510	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536_149581608_149581725
ES.25136.43	chr4	+	2407	4	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	7890	1804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.9386377963656	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149577679	149582929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149577752_149578188_149578271_149580536_149581586_149581725
ES.25136.45	chr4	+	904	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-144	1914	-144	15	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGACTCTTTATTTTT	NA	False	NA	32	True	AAGAAA	-45	NA	149602548	149648980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ES.25136.46	chr4	+	1162	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-115	1627	-115	302	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGAGCTTTGCAATAT	NA	False	NA	NA	False	NA	NA	NA	149602577	149649267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ES.25136.47	chr4	+	1407	6	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	-111	280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.5960661724897	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAACA	-30	NA	149602581	149649245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149602837_149619932_149620204_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ES.25136.48	chr4	+	2788	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	-107	-7	-107	7	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGAGCTGGTTTTTCTC	NA	False	NA	16	True	AATAAA	-23	NA	149602585	149650901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ES.25136.49	chr4	+	1268	6	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	-84	280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.8827870465487	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAACA	-30	NA	149602608	149649245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149633157_149633317_149648661
ES.25136.5	chr4	+	4709	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	3	3425	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGATTCCCAAGAACAA	NA	False	NA	NA	False	ATTAAA	-14	NA	149569699	149584550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.50	chr4	+	1045	5	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	-59	280	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	83.2676407735922	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAACA	-30	NA	149602633	149649245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149602837_149624285_149624371_149630167_149630250_149630858_149630950_149648661
ES.25136.51	chr4	+	1206	6	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	-54	302	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	98.5993914788524	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGAGCTTTGCAATAT	NA	False	NA	NA	False	NA	NA	NA	149602638	149649267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149602837_149624285_149624371_149625801_149625907_149630167_149630289_149630858_149630950_149648661
ES.25136.52	chr4	+	7439	1	FSM	ENSMUSG00000093403.3	ENSMUST00000177217.3	60	1	-4262	-3117	-4262	3117	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTGAACCAGACATG	3933	False	NA	NA	False	NA	NA	NA	149618057	149625496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149618100_149625500
ES.25136.53	chr4	+	2377	3	NNC	ENSMUSG00000028988.14	novel	2674	5	NA	NA	1145	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.5	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGAGCTGAGCTGGTTT	1381	False	NA	11	True	AATAAA	-18	NA	149630718	149650896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149630770_149630858_149630950_149648661
ES.25136.6	chr4	+	1857	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	-43	3	11	-3	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569707	149581122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.7	chr4	+	1273	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	False	NA	24	True	NA	NA	NA	149569707	149581122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.8	chr4	+	3109	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	11	1833	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACATTTCTGCACAAA	NA	False	NA	NA	False	NA	NA	NA	149569707	149582958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25136.9	chr4	+	4587	8	NNC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	11	3211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.672783035564	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGTCTGATTGCAGT	NA	False	NA	20	True	AATAAA	-21	NA	149569707	149584336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149569731_149570314_149570557_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ES.25137.1	chr4	-	2241	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	-13	-990	-9	3	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGACTACCCTCTGTT	1639	False	NA	-4	True	AATAAA	-20	NA	149569668	149552025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
ES.25137.2	chr4	-	2623	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	34	0	4	0	multi-exon	FALSE	canonical	3	41	junction_1	4.98887651569859	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGACGACTACCCTCT	1682	False	NA	-7	True	AATAAA	-17	NA	149569625	149552028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
ES.25137.3	chr4	-	1172	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	23	43	-3	-3	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATAACAGCTCAGTCAC	1675	False	NA	-9	True	ATTAAA	-22	NA	149569632	149553058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
ES.25137.4	chr4	-	6824	1	NIC	ENSMUSG00000028992.14	novel	2657	4	NA	NA	-11	-3928	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAACCAAACCACAGA	1667	False	NA	NA	False	NA	NA	NA	149569640	149562816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149562800_149569600
ES.25138.1	chr4	-	177	1	Intergenic	novelGene_20979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	149595086	149594909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149594900_149595100
ES.25139.1	chr4	-	178	1	Intergenic	novelGene_20980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTTAAATGCAC	NA	False	NA	NA	False	NA	NA	NA	149598331	149598153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149598200_149598300
ES.2514.1	chr10	+	171	1	Intergenic	novelGene_1907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAGGTCAAAATAC	NA	False	NA	NA	False	NA	NA	NA	27929085	27929256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_27929100_27929300
ES.25140.1	chr4	-	186	1	Intergenic	novelGene_20981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	149628953	149628767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149628800_149629000
ES.25141.1	chr4	-	5537	1	Genic_Genomic	ENSMUSG00000086949.2	novel	NA	NA	NA	NA	-2274	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATAAAAGGTTTC	8673	False	NA	NA	False	AATAAA	-8	NA	149654521	149648984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_149649000_149654500
ES.25142.1	chr4	+	4645	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	-182	-4	-182	4	multi-exon	FALSE	canonical	3	455	junction_9	51.7981175594149	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGGTCCATTCTGTCA	NA	False	NA	28	True	AATAAA	-23	NA	149670742	149733360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.10	chr4	+	4603	17	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_5	138.636609072063	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGAGTGGGGTCCATT	NA	False	NA	22	True	AATAAA	-17	NA	149670905	149733354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716546_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.11	chr4	+	4465	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.667012115993	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670906	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671219_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.13	chr4	+	616	3	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-16	-11266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	238.5	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGTGTGTACACTGTC	NA	False	NA	NA	False	NA	NA	NA	149670908	149700516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149700344
ES.25142.15	chr4	+	4702	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-15	0	intron_retention	FALSE	canonical	3	455	junction_9	53.3315103855122	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670909	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.16	chr4	+	3586	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-14	170	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAGGACAGGAATGTAAA	NA	False	NA	40	True	AATAAA	-31	NA	149670910	149732526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.17	chr4	+	4441	18	NIC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	198.134971996434	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670914	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.19	chr4	+	6044	17	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_11	138.462751647329	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670915	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149727810_149728037_149728283_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.2	chr4	+	3737	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	-110	832	-110	168	multi-exon	FALSE	canonical	3	455	junction_9	51.7981175594149	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCCAGGACAGGAATGTA	NA	False	NA	38	True	AATAAA	-29	NA	149670814	149732524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.20	chr4	+	6172	16	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	455	junction_9	52.9798284465156	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670918	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.21	chr4	+	4634	16	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	47	junction_9	131.787438281837	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670919	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.22	chr4	+	5944	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	455	junction_9	51.413610795197	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670919	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.23	chr4	+	6824	15	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	148.15911193369	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670921	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711787_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149728187_149728428_149728656_149729326_149729498_149729778_149730834_149731222_149731408_149731829
ES.25142.24	chr4	+	1372	4	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	1	18848	1	-2122	5prime_fragment	FALSE	canonical	3	456	junction_3	22.6617641757114	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTATATAAATGAACAT	NA	False	NA	NA	False	NA	NA	NA	149670925	149714508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759
ES.25142.25	chr4	+	4452	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	134.72619934121	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670925	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729919_149730697_149730834_149731222_149731408_149731829
ES.25142.26	chr4	+	3472	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	1	157	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	133.869765768269	841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTAGTAGTCCAGG	NA	False	NA	27	True	AATAAA	-18	NA	149670925	149732513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711811_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.27	chr4	+	4333	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	138.781696829949	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGAGTGGGGTCCATT	NA	False	NA	22	True	AATAAA	-17	NA	149670925	149733354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.28	chr4	+	4513	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_18	172.770882320424	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGAGTGGGGTCCAT	NA	False	NA	21	True	AATAAA	-16	NA	149670925	149733353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731586_149731645_149731829
ES.25142.3	chr4	+	4463	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-58	3	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGGGTCCATTCTGTC	NA	False	NA	27	True	AATAAA	-22	NA	149670866	149733359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.30	chr4	+	4514	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.884211864684	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670928	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149683644_149683705_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.31	chr4	+	4467	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	134.46716582542	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670928	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728416_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.32	chr4	+	4526	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	173.837345928619	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670928	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149723388_149723461_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.33	chr4	+	3851	15	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	145.24237308298	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGAGTGGGGTCCAT	NA	False	NA	21	True	AATAAA	-16	NA	149670930	149733353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713971_149719706_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.34	chr4	+	1741	9	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	7	10459	7	6267	5prime_fragment	FALSE	canonical	3	456	junction_3	36.8711862434612	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTCAGAGCCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	149670931	149722897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689
ES.25142.36	chr4	+	4234	17	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.466588366111	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670933	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149713778_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.37	chr4	+	4337	19	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.977191492863	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670933	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671024_149671136_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.38	chr4	+	3578	18	NIC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	9	155	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	198.134971996434	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTGCTAGTAGTCCA	NA	False	NA	25	True	AATAAA	-16	NA	149670933	149732511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.4	chr4	+	4533	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	-214	-1000	-44	0	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670880	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.40	chr4	+	3669	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	9	153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	170.938910465438	841	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGTGCTAGTAGTC	NA	False	NA	23	True	AATAAA	-14	NA	149670933	149732509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729162_149729229_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.41	chr4	+	3643	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	-155	-169	15	169	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAGGACAGGAATGTAA	NA	False	NA	39	True	AATAAA	-30	NA	149670939	149732525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.42	chr4	+	4243	17	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	176.150226635534	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670939	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711811_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.44	chr4	+	7988	1	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	16	-32854	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCATTTTTAATACCTCC	NA	False	NA	NA	False	NA	NA	NA	149670940	149678928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149670900_149678900
ES.25142.46	chr4	+	4319	19	NNC	ENSMUSG00000039953.14	novel	3319	19	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.884211864684	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670958	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698504_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149732659_149732765
ES.25142.48	chr4	+	4400	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	134.753806014131	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670974	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731400_149731829
ES.25142.49	chr4	+	3091	2	Intergenic	novelGene_20982	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAAATAAAATCATAGGT	NA	False	NA	NA	False	NA	NA	NA	149678301	149681428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149679129_149679164
ES.25142.5	chr4	+	4300	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-38	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	138.466588366111	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149670886	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.50	chr4	+	4384	18	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	13081	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	133.140142623683	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149684785	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149685016_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.51	chr4	+	4319	17	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	13089	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	175.874955579241	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149684793	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149685016_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.52	chr4	+	3458	17	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	13105	155	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	175.874955579241	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTGCTAGTAGTCCA	NA	False	NA	25	True	AATAAA	-16	NA	149684809	149732511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149685016_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.53	chr4	+	4312	18	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	18651	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	134.448714190225	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGAGTGGGGTCCATT	NA	False	NA	22	True	AATAAA	-17	NA	149690355	149733354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149690516_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.54	chr4	+	4455	19	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	-19352	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.884211864684	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149692234	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149692371_149698023_149698190_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.55	chr4	+	4671	21	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	-19330	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	234.569307455174	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149692256	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149692371_149692833_149693054_149694476_149694603_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731586_149731645_149731829
ES.25142.56	chr4	+	4299	18	NNC	ENSMUSG00000039953.14	novel	822	4	NA	NA	-19219	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.667012115993	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149692367	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149692514_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.57	chr4	+	159	1	Intergenic	novelGene_20984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	3849	False	NA	NA	False	NA	NA	NA	149706763	149706922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149706800_149706900
ES.25142.58	chr4	+	4033	16	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	40741	1	79	-1	3prime_fragment	FALSE	canonical	3	455	junction_7	53.1862137525631	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	8751	False	NA	23	True	AATAAA	-18	NA	149711665	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.59	chr4	+	2919	14	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	4631	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	203.307794173262	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149716217	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727654_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149732101_149732998
ES.25142.6	chr4	+	9458	15	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-29	0	intron_retention	FALSE	canonical	3	456	junction_3	50.5020205698015	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670895	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.60	chr4	+	3521	13	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	4637	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	203.336885214879	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGAGTGGGGTCCAT	NA	False	NA	21	True	AATAAA	-16	NA	149716223	149733353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730703_149730834_149731222_149731408_149731829
ES.25142.61	chr4	+	3642	12	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	47850	1	7188	-1	3prime_fragment	FALSE	canonical	3	455	junction_3	55.7139981223468	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149718774	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.62	chr4	+	3233	11	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	7540	-1	combination_of_known_splicesites	FALSE	canonical	3	47	junction_3	158.68361604148	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149719126	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.63	chr4	+	2904	12	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	7697	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	164.283065529697	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGAGTGGGGTCCATT	NA	False	NA	22	True	AATAAA	-17	NA	149719283	149733354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728098_149728567_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.64	chr4	+	4794	8	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	14255	-1	intron_retention	FALSE	canonical	1	2	junction_7	262.177615445744	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149725841	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731586_149731645_149731829
ES.25142.65	chr4	+	2167	5	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	58399	1	17737	-1	3prime_fragment	FALSE	canonical	3	508	junction_4	61.8763888733013	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149729323	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.66	chr4	+	1997	4	ISM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	58850	1	18188	-1	3prime_fragment	FALSE	canonical	3	508	junction_3	23.4236347876812	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGTGGGGTCCATTC	NA	False	NA	23	True	AATAAA	-18	NA	149729774	149733355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.7	chr4	+	4344	18	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	133.869765768269	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670896	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711811_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ES.25142.8	chr4	+	3589	19	NNC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	130.977191492863	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670896	149733356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829_149732101_149732998
ES.25143.1	chr4	+	174	1	Intergenic	novelGene_20985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	149755502	149755676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149755500_149755700
ES.25144.1	chr4	-	1993	1	Intergenic	novelGene_20983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAGAAAA	8729	False	NA	NA	False	NA	NA	NA	149680796	149678803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149678800_149680800
ES.25145.1	chr4	-	4534	1	Antisense	novelGene_ENSMUSG00000039953.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149726392	149721858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_149721900_149726400
ES.25145.2	chr4	-	2233	1	Antisense	novelGene_ENSMUSG00000039953.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGAAATTCAAATTCTCC	NA	False	NA	NA	False	NA	NA	NA	149726392	149724159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_149724200_149726400
ES.25146.1	chr4	-	6075	24	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	27	1211	combination_of_known_junctions	TRUE	canonical	2	7	junction_23	5.23547590382274	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGAAAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149760474	149732413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
ES.25146.10	chr4	-	4873	25	NNC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	6.94609702558846	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783063	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149781505_149781571_149783011
ES.25146.11	chr4	-	4984	25	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	7.6412622575651	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783067	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739958_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149781505_149781681_149783011
ES.25146.15	chr4	-	4519	21	ISM	ENSMUSG00000039936.19	ENSMUST00000122059.8	4832	24	41293	0	2987	0	3prime_fragment	FALSE	canonical	0	0	junction_16	6.01227910197123	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	4704	False	NA	-2	True	AATAAA	-18	NA	149744754	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741913_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458
ES.25146.16	chr4	-	4800	23	NNC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	2128	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	5.73448319560369	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCTTGGCTCAAATAA	NA	False	NA	-3	True	AATAAA	-17	NA	149756523	149733627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149756359
ES.25146.17	chr4	-	4924	23	NNC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	-43	0	intron_retention	FALSE	canonical	0	0	junction_12	7.3379180509402	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCTTGGCTCAAATAA	NA	False	NA	-3	True	AATAAA	-17	NA	149783105	149733627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740833_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743590_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
ES.25146.18	chr4	-	4259	19	NIC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	3425	-1	intron_retention	FALSE	canonical	3	10	junction_10	3.64471543707927	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTGGCTCAAATA	5142	False	NA	-4	True	AATAAA	-16	NA	149744316	149733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149
ES.25146.19	chr4	-	4585	17	NIC	ENSMUSG00000039936.19	novel	4765	23	NA	NA	3462	-1	intron_retention	FALSE	canonical	3	15	junction_9	3.38135974868099	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTGGCTCAAATA	5179	False	NA	-4	True	AATAAA	-16	NA	149744279	149733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149
ES.25146.2	chr4	-	4919	24	NNC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	6.09068208968259	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTGGCTCAAATAACAA	NA	False	NA	0	True	AATAAA	-20	NA	149760547	149733624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743590_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
ES.25146.21	chr4	-	4874	24	NIC	ENSMUSG00000039936.19	novel	4894	24	NA	NA	-5	-28	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	5.92326482293092	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATAAAAACGTTTT	NA	False	NA	-31	True	GGGGCT	-45	NA	149760506	149733655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739715_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
ES.25146.3	chr4	-	4948	24	NIC	ENSMUSG00000039936.19	novel	4905	24	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_23	5.23547590382274	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTGGCTCAAATAACAA	NA	False	NA	0	True	AATAAA	-20	NA	149760558	149733624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149760368
ES.25146.5	chr4	-	4938	24	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	5.81211823146122	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783193	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
ES.25146.6	chr4	-	4665	23	NIC	ENSMUSG00000039936.19	novel	4335	25	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.07413517186038	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783044	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739706_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
ES.25146.7	chr4	-	4241	19	NIC	ENSMUSG00000039936.19	novel	4765	23	NA	NA	3446	0	intron_retention	FALSE	canonical	2	3	junction_7	4.84353967086158	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	5163	False	NA	-2	True	AATAAA	-18	NA	149744295	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738596_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149
ES.25146.9	chr4	-	4863	24	FSM	ENSMUSG00000039936.19	ENSMUST00000105690.9	4921	24	56	2	46	0	multi-exon	FALSE	canonical	1	2	junction_23	6.4283163750526	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149783109	149733626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739715_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532_149758652_149783011
ES.25147.1	chr4	+	175	1	Intergenic	novelGene_20986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAGATCTTAAATGG	NA	False	NA	NA	False	NA	NA	NA	149791440	149791615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149791400_149791600
ES.25148.1	chr4	+	3742	1	Antisense	novelGene_ENSMUSG00000044700.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAACCACGACATGG	NA	False	NA	NA	False	NA	NA	NA	149811257	149814999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_149811300_149815000
ES.25149.1	chr4	-	3737	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	-40	0	-40	0	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822541	149799831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.11	chr4	-	5093	9	NIC	ENSMUSG00000044700.16	novel	4631	10	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	194	junction_1	66.3226017282193	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	149822464	149799833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.12	chr4	-	4692	10	NNC	ENSMUSG00000044700.16	novel	4631	10	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_7	107.807899570841	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	149822495	149799833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814231_149815519_149815715_149816292_149816414_149822291
ES.25149.13	chr4	-	3551	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	111.240258277875	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGGCTGTGTTTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	149822495	149799833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.14	chr4	-	3721	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.302795862922	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCAGGCTGTGTTTTCT	NA	False	NA	-5	True	AATAAA	-21	NA	149822496	149799835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806930_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.15	chr4	-	4200	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-16	2	intron_retention	FALSE	canonical	3	194	junction_2	66.5782747348312	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822517	149799837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.17	chr4	-	4252	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	6	2	intron_retention	FALSE	canonical	3	203	junction_2	65.2635681933905	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822495	149799837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149802615_149803107_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.18	chr4	-	5442	9	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	4	2	intron_retention	FALSE	canonical	3	194	junction_3	66.1149567042133	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATCAGGCTGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	149822497	149799837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.2	chr4	-	4656	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	-17	-8	-17	0	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822518	149799831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.20	chr4	-	3568	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	101.909545949119	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822501	149799839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149822291
ES.25149.23	chr4	-	5887	9	NNC	ENSMUSG00000044700.16	novel	4631	10	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_6	136.606185804304	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822473	149799839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815523_149815715_149816292_149816414_149821496
ES.25149.24	chr4	-	3988	13	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	135.933884051525	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTATCAGGCTGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	149822495	149799840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149809322_149809508_149809638_149809760_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.26	chr4	-	3567	12	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.424493454955	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTATCAGGCTGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	149822456	149799840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149800960_149801035_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.27	chr4	-	7225	4	ISM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	11753	1	4396	-1	3prime_fragment	FALSE	canonical	3	194	junction_2	4.49691252107735	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTATCAGGCTGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	149810748	149799840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663
ES.25149.29	chr4	-	3644	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.302795862922	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTGTATCAGGCTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	149822497	149799841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806858_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.3	chr4	-	3663	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	103.549022206876	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822521	149799831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803348_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.30	chr4	-	3191	4	NNC	ENSMUSG00000044700.16	novel	4631	10	NA	NA	8374	-3	intron_retention	FALSE	canonical	3	9	junction_2	91.6890881669618	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTGTATCAGGCTGT	NA	False	NA	-12	True	AATAAA	-14	NA	149806770	149799842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149802615_149803107_149803348_149803968_149804041_149806663
ES.25149.31	chr4	-	3128	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-22	-1076	intron_retention	FALSE	canonical	3	194	junction_2	66.5782747348312	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTTTGTGACTTTCCC	NA	False	NA	NA	False	AATAAA	-22	NA	149822523	149800915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.32	chr4	-	2618	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	-6	1085	-6	-1077	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTTTGTGACTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	149822507	149800916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.33	chr4	-	4735	5	ISM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	12224	1086	4867	-1078	3prime_fragment	FALSE	canonical	3	194	junction_3	9.36416040016402	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCTGTTTGTGACTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	149810277	149800917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663
ES.25149.34	chr4	-	3574	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	-21	1078	-21	-1078	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACCTGTTTGTGACTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	149822522	149800917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.35	chr4	-	2366	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-84	-1079	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	103.549022206876	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACCTGTTTGTGACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	149822311	149800918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803348_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.36	chr4	-	3659	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	-31	-8	-31	8	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTTTCATGTTCTT	NA	False	NA	0	True	NA	NA	NA	149822532	149809312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.39	chr4	-	3472	5	NIC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	147.845358398565	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	False	NA	-8	True	AATAAA	-39	NA	149822474	149809320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149822291
ES.25149.4	chr4	-	3691	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	99.479696420928	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822521	149799831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816318_149816414_149822291
ES.25149.40	chr4	-	3399	7	NNC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.874184985029	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCGCGTCTTTTTTTCT	NA	False	NA	-11	True	AATAAA	-36	NA	149822501	149809323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149809786_149810003_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.43	chr4	-	3549	6	NNC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	-19	-18	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	134.049244682691	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTTGGCACCAGGTAC	NA	False	NA	-26	True	AATAAA	-21	NA	149822474	149809338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816318_149816414_149822291
ES.25149.44	chr4	-	4367	6	NNC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	-19	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	140.351843593164	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCGGTTGGCACCAGG	NA	False	NA	-29	True	AATAAA	-18	NA	149822474	149809341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149821496
ES.25149.45	chr4	-	3282	4	NIC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	1	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	161.361567777323	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCGGTTGGCACCAGG	NA	False	NA	-29	True	AATAAA	-18	NA	149822500	149809341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149811888_149812358_149812709_149813992_149814170_149822291
ES.25149.46	chr4	-	3344	5	NNC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	-18	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	143.903613575198	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCGGTTGGCACCAGG	NA	False	NA	-29	True	AATAAA	-18	NA	149822473	149809341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149811888_149812358_149812709_149813992_149814125_149816279_149816414_149822291
ES.25149.5	chr4	-	5171	10	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_8	135.98402230037	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822432	149799831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149818701_149818810_149822291
ES.25149.6	chr4	-	4697	10	NNC	ENSMUSG00000044700.16	novel	4631	10	NA	NA	-26	-1	intron_retention	FALSE	canonical	0	0	junction_4	112.514800123866	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGGCTGTGTTTTCTTTG	NA	False	NA	-2	True	AATAAA	-24	NA	149822527	149799832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806930_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.25149.8	chr4	-	3732	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.974643137912	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGGCTGTGTTTTCTTTG	NA	False	NA	-2	True	AATAAA	-24	NA	149822517	149799832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812712_149813991_149814170_149815519_149815715_149816318_149816456_149822291
ES.25149.9	chr4	-	3352	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	102.834278763887	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGGCTGTGTTTTCTTTG	NA	False	NA	-2	True	AATAAA	-24	NA	149822507	149799832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ES.2515.1	chr10	-	157	1	Intergenic	novelGene_1908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	27936639	27936482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_27936500_27936600
ES.25150.1	chr4	-	180	1	Intergenic	novelGene_20987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGACACTCAT	NA	False	NA	NA	False	NA	NA	NA	149823836	149823656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149823700_149823800
ES.25151.1	chr4	+	644	1	Intergenic	novelGene_20988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACATACTCTT	NA	False	NA	NA	False	NA	NA	NA	149826465	149827109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149826500_149827100
ES.25152.1	chr4	+	4105	3	NNC	ENSMUSG00000085403.2	novel	876	2	NA	NA	-2145	1165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTGTTTACTTGCTCA	NA	False	NA	NA	False	ACTAAA	-14	NA	149830829	149835229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149833068_149833281_149833405_149833485
ES.25152.2	chr4	+	152	1	Intergenic	novelGene_20989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	149830829	149830981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149830800_149831000
ES.25152.3	chr4	+	4408	1	Genic_Genomic	ENSMUSG00000085403.2	novel	NA	NA	NA	NA	-2143	1175	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCTCAAACCTTTTTG	NA	False	NA	NA	False	ACTAAA	-24	NA	149830831	149835239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_149830800_149835200
ES.25152.4	chr4	+	1987	3	NNC	ENSMUSG00000085403.2	novel	876	2	NA	NA	-2141	1169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTACTTGCTCAAACC	NA	False	NA	NA	False	ACTAAA	-18	NA	149830833	149835233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_149830950_149833281_149833405_149833485
ES.25152.5	chr4	+	2725	1	Genic_Genomic	ENSMUSG00000085403.2	novel	NA	NA	NA	NA	-1224	411	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATTTGTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	149831750	149834475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_149831800_149834500
ES.25153.1	chr4	+	237	1	Intergenic	novelGene_20990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTGGTTTACTTTG	NA	False	NA	NA	False	NA	NA	NA	149845270	149845507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149845300_149845500
ES.25154.1	chr4	+	450	1	Intergenic	novelGene_20991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	149848729	149849179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_149848700_149849200
ES.25155.1	chr4	-	4720	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-16	-2817	-16	2817	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACTATAAGTAAATTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	149858750	149825675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.10	chr4	-	3397	4	NNC	ENSMUSG00000028982.10	novel	1887	7	NA	NA	-19	-443	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	222.181607399593	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAAGTTCGTGCTGGGC	NA	False	NA	-10	True	ATTAAA	-12	NA	149858753	149828935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149829395_149833505_149834541_149845397_149847004_149858456
ES.25155.11	chr4	-	5015	6	NNC	ENSMUSG00000028982.10	novel	1887	7	NA	NA	13428	-596	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	188.089978467754	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGGCTCATGTCACC	9163	False	NA	56	True	NA	NA	NA	149845306	149829088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149841124
ES.25155.12	chr4	-	1252	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-17	652	-17	-652	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTCTTTTCCGTTGAT	NA	False	NA	0	True	AATAAA	-15	NA	149858751	149829144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.2	chr4	-	5986	6	NIC	ENSMUSG00000028982.10	novel	1887	7	NA	NA	15	3	intron_retention	FALSE	canonical	3	394	junction_4	33.3550595862157	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTCCTGCATTTATC	NA	False	NA	NA	False	AATAAA	-23	NA	149858719	149828489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.3	chr4	-	1905	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-16	-2	-16	2	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTCCTGCATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	149858750	149828490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.4	chr4	-	1471	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	-17	433	-17	-433	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGGCTGTGTTCTCC	NA	False	NA	0	True	ATTAAA	-22	NA	149858751	149828925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.5	chr4	-	1286	6	NIC	ENSMUSG00000028982.10	novel	1887	7	NA	NA	-16	-437	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	188.886209131318	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGTGCTGGGCTGTGTT	NA	False	NA	-4	True	ATTAAA	-18	NA	149858750	149828929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149858456
ES.25155.6	chr4	-	1423	7	NNC	ENSMUSG00000028982.10	novel	1887	7	NA	NA	24	-438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.225046302972	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCGTGCTGGGCTGTGT	NA	False	NA	-5	True	ATTAAA	-17	NA	149858710	149828930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149829395_149833505_149833781_149836856_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ES.25155.7	chr4	-	2992	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	22701	438	22701	-438	3prime_fragment	FALSE	canonical	3	481	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCGTGCTGGGCTGTGT	NA	False	NA	-5	True	ATTAAA	-17	NA	149836033	149828930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_149829395_149833505
ES.25156.1	chr4	-	4951	1	Genic_Genomic	ENSMUSG00000084807.2	novel	NA	NA	NA	NA	-758	3502	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTAAAAATCTATGTCAG	NA	False	NA	NA	False	NA	NA	NA	149865929	149860978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_149861000_149865900
ES.25156.2	chr4	-	1232	2	NNC	ENSMUSG00000084807.2	novel	486	2	NA	NA	63	769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTGTCTCTCTATGT	NA	False	NA	NA	False	ATTAAA	-33	NA	149865108	149863711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149864773_149864937
ES.25157.1	chr4	-	177	1	Intergenic	novelGene_20992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTTAACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	149878258	149878081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149878100_149878300
ES.25158.1	chr4	-	175	1	Intergenic	novelGene_20993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGGATTTAG	NA	False	NA	NA	False	NA	NA	NA	149880187	149880012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_149880000_149880200
ES.25159.1	chr4	+	164	1	Intergenic	novelGene_20994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATTAATTAAAAAAAA	7447	False	NA	NA	False	NA	NA	NA	150041008	150041172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150041000_150041200
ES.2516.1	chr10	+	5146	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-363	91	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCATGCCACCTA	NA	False	NA	49	True	AATAAA	-37	NA	27950452	28472053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.10	chr10	+	1643	3	FSM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-188	9	2	-9	multi-exon	FALSE	canonical	3	159	junction_2	6	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTGCTTTTTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	27950817	28140660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27951174_28082129_28082253_28139496
ES.2516.12	chr10	+	4681	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	16	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	40.2360750574474	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGCATCCACATTTCA	NA	False	NA	40	True	AATAAA	-28	NA	27950831	28472044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359249_28368945_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.14	chr10	+	746	3	FSM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-172	890	-16	-890	multi-exon	FALSE	canonical	3	159	junction_2	6	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTTCTGGTTTGTGCT	NA	False	NA	NA	False	AATGAA	-18	NA	27950833	28139779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27951174_28082129_28082253_28139496
ES.2516.16	chr10	+	5297	28	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-13	-607	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	41.6033922854503	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGCAATTGTCTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	27950836	28472786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.17	chr10	+	4729	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-8	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	40.2710790735771	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGACTGTATGAGAG	NA	False	NA	27	True	AATAAA	-15	NA	27950841	28472031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461924_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.18	chr10	+	6035	31	FSM	ENSMUSG00000019889.11	ENSMUST00000218359.2	4669	31	-8	-1358	-8	-80	multi-exon	FALSE	canonical	0	0	junction_18	49.2190229710243	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTACTGATTGAACA	NA	False	NA	14	True	AATAAA	-14	NA	27950841	28473313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28446169_28446188_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.19	chr10	+	4726	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-7	70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	40.2448510750126	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGACTGTATGAGAGC	NA	False	NA	28	True	AATAAA	-16	NA	27950842	28472032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456397_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.2	chr10	+	6310	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-185	2	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAGAATGTCACAAAAAT	NA	False	NA	96	True	AATAAA	-20	NA	27950630	28473395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.20	chr10	+	4476	29	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-7	83	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.8890983924437	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950842	28472045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.22	chr10	+	4627	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-5	70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	47.5395323321954	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGACTGTATGAGAGC	NA	False	NA	28	True	AATAAA	-16	NA	27950844	28472032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28462021_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.23	chr10	+	3934	13	ISM	ENSMUSG00000019889.11	ENSMUST00000218584.2	2470	14	-73	6	-5	-6	intron_retention	FALSE	canonical	3	130	junction_6	13.8072042386896	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGCAGTACTTGGAACA	NA	False	NA	NA	False	NA	NA	NA	27950844	28374452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904
ES.2516.25	chr10	+	4736	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-2	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	38.8500884142863	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGCATCCACATTTCA	NA	False	NA	40	True	AATAAA	-28	NA	27950847	28472044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461561_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.26	chr10	+	6048	31	NIC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	-2	-79	combination_of_known_splicesites	FALSE	canonical	3	10	junction_16	47.0358728348197	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTACTGATTGAACAT	NA	False	NA	15	True	AATAAA	-15	NA	27950847	28473314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.27	chr10	+	3775	15	FSM	ENSMUSG00000019889.11	ENSMUST00000219478.2	3960	15	-5	190	-2	-190	multi-exon	FALSE	canonical	3	130	junction_6	12.851784597749	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACTATAAGCATAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	27950847	28437216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000
ES.2516.29	chr10	+	4723	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-2	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	40.1135427743799	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGACTGTATGAGAG	NA	False	NA	27	True	AATAAA	-15	NA	27950847	28472031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450820_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.3	chr10	+	4851	29	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-172	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	40.9908370796425	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	27950643	28472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28427660_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.30	chr10	+	4730	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-1	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.4811183449439	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950848	28472043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349047_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.31	chr10	+	4822	31	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	0	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.3160893286021	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950852	28472045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28132025_28132110_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.32	chr10	+	5562	31	NIC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	1	-559	combination_of_known_splicesites	FALSE	canonical	3	10	junction_16	47.0358728348197	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTAGTTCTCCCCCA	NA	False	NA	NA	False	ATTAAA	-11	NA	27950853	28472834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.33	chr10	+	6023	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	40.2448510750126	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTACTGATTGAACA	NA	False	NA	14	True	AATAAA	-14	NA	27950853	28473313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464905_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.34	chr10	+	5427	31	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	-612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.6069017554601	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTTGGCAATTGTC	NA	False	NA	NA	False	ATTAAA	-8	NA	27950853	28472781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436053_28436098_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.35	chr10	+	1105	3	FSM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	-152	511	1	-511	multi-exon	FALSE	canonical	3	159	junction_2	6	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATATGGTCTTTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	27950853	28140158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27951174_28082129_28082253_28139496
ES.2516.37	chr10	+	5496	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	-607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	40.2448510750126	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGCAATTGTCTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	27950853	28472786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464905_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.38	chr10	+	6104	31	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.2600920286053	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTACTGATTGAACA	NA	False	NA	14	True	AATAAA	-14	NA	27950853	28473313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_27965922_27966022_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.39	chr10	+	4718	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	37.6109693817629	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	27950853	28472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465049_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.4	chr10	+	5707	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-138	-554	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTCTCCCCCAGTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	27950677	28472839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.40	chr10	+	4944	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	4	293	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTGCAAAGTCATGG	NA	False	NA	NA	False	AATAAA	-32	NA	27950856	28472255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.41	chr10	+	4683	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-4	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.5029005935828	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGACTGTATGAG	NA	False	NA	25	True	AATAAA	-13	NA	27950858	28472029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342038_28348954_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.45	chr10	+	4337	29	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	30	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.8677757745009	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTATGAGAGCATCCA	NA	False	NA	33	True	AATAAA	-21	NA	27950947	28472037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139774_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.46	chr10	+	5449	1	Intergenic	novelGene_1909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGGCAGGCTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	27971478	27976927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_27971500_27976900
ES.2516.47	chr10	+	4419	29	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	131122	83	combination_of_known_splicesites	FALSE	canonical	3	130	junction_5	26.3018923428777	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	7195	False	NA	41	True	AATAAA	-29	NA	28082127	28472045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.48	chr10	+	5222	12	NNC	ENSMUSG00000019889.11	novel	2986	14	NA	NA	188685	2862	intron_retention	FALSE	non_canonical	0	0	junction_3	47.6101593436451	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTATATCAAGTCTGTAC	NA	False	NA	NA	False	NA	NA	NA	28139690	28431056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_28139769_28210471_28210554_28212417_28212534_28230598_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613
ES.2516.49	chr10	+	3054	1	Intergenic	novelGene_1911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACTTCTTACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	28161204	28164258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_28161200_28164300
ES.2516.5	chr10	+	2577	1	FSM	ENSMUSG00000019889.11	ENSMUST00000219107.2	2364	1	-199	-14	-114	14	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTGACTAGGGACAAGAA	NA	False	NA	NA	False	ATTAAA	-33	NA	27950701	27953278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_27950700_27953300
ES.2516.50	chr10	+	3838	25	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-223679	68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	43.8937914807499	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTGACTGTATGAGA	NA	False	NA	26	True	AATAAA	-14	NA	28212467	28472030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.51	chr10	+	6557	1	Intergenic	novelGene_1913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	28222603	28229160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_28222600_28229200
ES.2516.52	chr10	+	1862	1	Intergenic	novelGene_1914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	28239076	28240938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_28239100_28240900
ES.2516.53	chr10	+	3680	25	NNC	ENSMUSG00000019889.11	novel	846	7	NA	NA	-179350	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.5037514346624	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	9008	False	NA	29	True	AATAAA	-17	NA	28256796	28472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_28256840_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.54	chr10	+	3966	1	Intergenic	novelGene_1916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28315037	28319003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_28315000_28319000
ES.2516.55	chr10	+	3237	2	Intergenic	novelGene_1917	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGGAAGGAAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	28333189	28336512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_28335117_28335202
ES.2516.56	chr10	+	3085	22	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-94326	82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	46.2064773462859	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGCATCCACATTTCA	NA	False	NA	40	True	AATAAA	-28	NA	28341820	28472044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_28342057_28348943_28349054_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.57	chr10	+	2607	20	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	-76889	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	54.7356275168888	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGCATCCACATTTCA	NA	False	NA	40	True	AATAAA	-28	NA	28359257	28472044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465079_28465332_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.58	chr10	+	10873	13	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	608	70	intron_retention	FALSE	canonical	0	0	junction_8	59.5655567887647	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGACTGTATGAGAGC	NA	False	NA	28	True	AATAAA	-16	NA	28436754	28472032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464925_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.59	chr10	+	5224	15	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	3154	94	intron_retention	FALSE	canonical	3	141	junction_1	30.4781621386024	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCATGCCACCTAATT	NA	False	NA	52	True	AATAAA	-40	NA	28439300	28472056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.6	chr10	+	4816	31	NIC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	-7	81	combination_of_known_splicesites	FALSE	canonical	3	10	junction_16	47.0358728348197	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950808	28472043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.60	chr10	+	3360	3	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	2068	71	intron_retention	FALSE	canonical	3	199	junction_2	8.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	28465056	28472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_28468045_28468765_28468902_28471797
ES.2516.7	chr10	+	4738	30	NNC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	0	69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	38.9516911692739	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGACTGTATGAGAG	NA	False	NA	27	True	AATAAA	-15	NA	27950815	28472031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465364_28467886_28468045_28468765_28468902_28471797
ES.2516.8	chr10	+	4763	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	1	81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	47.5753360896463	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGCATCCACATTTC	NA	False	NA	39	True	AATAAA	-27	NA	27950816	28472043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450907_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.2516.9	chr10	+	4638	29	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	2	71	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.9638342234429	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGACTGTATGAGAGCA	NA	False	NA	29	True	AATAAA	-17	NA	27950817	28472033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_27951174_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ES.25160.1	chr4	+	2825	1	Intergenic	novelGene_20995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGGAAAGAAAA	729	False	NA	NA	False	NA	NA	NA	150049911	150052736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150049900_150052700
ES.25161.1	chr4	-	3129	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	-37	0	-37	0	multi-exon	FALSE	canonical	3	59	junction_1	6.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	3	True	AATAAA	-24	NA	150039537	149980739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149982799_149990872_149991715_150039309
ES.25161.10	chr4	-	4803	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-27	-31	-27	31	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCCAGCCTCCTGCC	NA	False	NA	31	True	GATAAA	-17	NA	150093507	150063900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ES.25161.11	chr4	-	4339	6	NNC	ENSMUSG00000028980.15	novel	4745	5	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7315704567917	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACATTGAGTTGATAAAC	NA	False	NA	-4	True	ATTAAA	-22	NA	150093462	150063935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150066578_150066961_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ES.25161.12	chr4	-	5277	5	NIC	ENSMUSG00000028980.15	novel	4571	5	NA	NA	-668	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	29.2489316044193	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACATTGAGTTGATAAAC	NA	False	NA	-4	True	ATTAAA	-22	NA	150086415	150063935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150085606
ES.25161.13	chr4	-	3997	3	NIC	ENSMUSG00000028980.15	novel	4745	5	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAACATTGAGTTGATAA	NA	False	NA	-6	True	ATTAAA	-20	NA	150093493	150063937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150067379_150068359_150068630_150093207
ES.25161.14	chr4	-	5172	6	NNC	ENSMUSG00000028980.15	novel	4571	5	NA	NA	-315	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.688836014762	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAACATTGAGTTGATAA	NA	False	NA	-6	True	ATTAAA	-20	NA	150086062	150063937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150084233_150084484_150085606
ES.25161.15	chr4	-	4509	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	-39	275	-39	-275	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGACATTGTCTGTGT	NA	False	NA	-6	True	AATAAA	-19	NA	150093519	150064206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ES.25161.16	chr4	-	4431	5	NNC	ENSMUSG00000028980.15	novel	4571	5	NA	NA	2195	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.2489316044193	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGACATTGTCTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	150083527	150064207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150083292
ES.25161.17	chr4	-	4514	5	NNC	ENSMUSG00000028980.15	novel	4571	5	NA	NA	1171	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.2489316044193	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGGGACATTGTCTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	150084551	150064207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150084233
ES.25161.18	chr4	-	4559	6	NNC	ENSMUSG00000028980.15	novel	4745	5	NA	NA	14	-284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.8915918776324	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTTGGTGGGGGACAT	NA	False	NA	-15	True	AATAAA	-10	NA	150093466	150064215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150067379_150068359_150068630_150073776_150073889_150078925_150079044_150080201_150080839_150093207
ES.25161.19	chr4	-	1227	2	FSM	ENSMUSG00000028980.15	ENSMUST00000153394.2	650	2	-88	-489	-63	489	multi-exon	FALSE	canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGAATGCTGTCTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	150085810	150079815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150080839_150085606
ES.25161.2	chr4	-	3321	4	NNC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.8128667266709	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	3	True	AATAAA	-24	NA	150039466	149980739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149982799_149990872_149991715_150011252_150011516_150039309
ES.25161.3	chr4	-	3911	5	Fusion	ENSMUSG00000039911.14_ENSMUSG00000028980.15	novel	3092	3	NA	NA	18	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5726313579245	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	3	True	AATAAA	-24	NA	150093462	149980739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_149982799_149990872_149991715_150078925_150079044_150080201_150080839_150093207
ES.25161.4	chr4	-	3352	3	NNC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	-5496	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	28.5	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCATCCGAGTCCTTTC	NA	False	NA	-1	True	AATAAA	-20	NA	150021509	149980743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149982799_149990872_149991715_150021054
ES.25161.5	chr4	-	2987	3	NNC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	-5395	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.5	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCATCCGAGTCCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	150021408	149980744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149982799_149990872_149991715_150021317
ES.25161.6	chr4	-	2870	4	NNC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.3297870333578	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAACCATCCGAGTCCT	NA	False	NA	-4	True	AATAAA	-17	NA	150039492	149980746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149981523_149981729_149982799_149990872_149991715_150039309
ES.25161.7	chr4	-	3503	4	NNC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	-5513	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.8128667266709	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAAACCATCCGAG	NA	False	NA	-8	True	AATAAA	-13	NA	150021526	149980750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_149982799_149990872_149991715_149993185_149993327_150021054
ES.25161.8	chr4	-	3083	3	NIC	ENSMUSG00000039911.14	novel	3092	3	NA	NA	39	-11	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	29	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAAACCATCCGAG	NA	False	NA	-8	True	AATAAA	-13	NA	150030516	149980750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_149982799_149990872_149991715_150030323
ES.25161.9	chr4	-	1409	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	1	1682	1	2	multi-exon	FALSE	canonical	3	59	junction_1	6.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGGCGCCTTCTGCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	150039499	149982421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_149982799_149990872_149991715_150039309
ES.25162.1	chr4	-	179	1	Intergenic	novelGene_20996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATAGTTC	NA	False	NA	NA	False	NA	NA	NA	150096174	150095995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150096000_150096200
ES.25163.1	chr4	+	174	1	Intergenic	novelGene_20997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAAGAAA	2642	False	NA	NA	False	NA	NA	NA	150106247	150106421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150106200_150106400
ES.25164.1	chr4	+	803	4	NNC	ENSMUSG00000086665.2	novel	404	2	NA	NA	-751	494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAGCACACAGAGAGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	150132718	150141927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150132829_150133455_150133723_150141282_150141434_150141652
ES.25165.1	chr4	-	3093	2	Antisense	novelGene_ENSMUSG00000086665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGTGTGTGTT	NA	False	NA	NA	False	TATAAA	-15	NA	150133556	150128019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150129480_150131923
ES.25166.1	chr4	+	2163	2	Genic_Genomic	ENSMUSG00000102813.2	novel	2459	1	NA	NA	1	794	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAAAATGAGTATCA	4086	False	NA	-3	True	AATAAA	-10	NA	150152996	150156248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150153108_150154196
ES.25166.2	chr4	+	3252	1	FSM	ENSMUSG00000102813.2	ENSMUST00000194216.2	2459	1	1	-794	1	794	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAAAATGAGTATCA	4086	False	NA	-3	True	AATAAA	-10	NA	150152996	150156248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150153000_150156200
ES.25166.3	chr4	+	1493	2	Genic_Genomic	ENSMUSG00000102813.2	novel	2459	1	NA	NA	1	794	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAAAATGAGTATCA	4086	False	NA	-3	True	AATAAA	-10	NA	150152996	150156248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150154196_150155954
ES.25166.4	chr4	+	3072	2	Genic_Genomic	ENSMUSG00000102813.2	novel	2459	1	NA	NA	1	794	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAAAAATGAGTATCA	4086	False	NA	-3	True	AATAAA	-10	NA	150152996	150156248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150154057_150154236
ES.25166.5	chr4	+	3080	2	Genic_Genomic	ENSMUSG00000102813.2	novel	2459	1	NA	NA	1	805	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCAGTGCATTTGTA	4086	False	NA	8	True	AATAAA	-21	NA	150152996	150156259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150154047_150154229
ES.25166.6	chr4	+	2543	2	Genic_Genomic	ENSMUSG00000102813.2	novel	2459	1	NA	NA	544	805	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCAGTGCATTTGTA	4629	False	NA	8	True	AATAAA	-21	NA	150153539	150156259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150154064_150154240
ES.25167.1	chr4	+	4072	5	NNC	ENSMUSG00000047875.7	novel	4900	4	NA	NA	20	-248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.57071421427143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCATATGTGTTTGTT	NA	False	NA	12	True	AATAAA	-32	NA	150171841	150190136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668_150189492_150190051
ES.25167.2	chr4	+	1809	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	186	2905	186	-2905	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTCCAGAGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	150172007	150187479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
ES.25167.3	chr4	+	4718	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	255	-73	255	73	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTGTTTGCTGAGCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	150172076	150190457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
ES.25167.4	chr4	+	4618	5	NNC	ENSMUSG00000047875.7	novel	4900	4	NA	NA	257	71	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	3.57071421427143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCGTGTTTGCTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	150172078	150190455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668_150189965_150190060
ES.25167.5	chr4	+	4131	5	NNC	ENSMUSG00000047875.7	novel	4900	4	NA	NA	260	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.57071421427143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTGTGATGTTAACTC	NA	False	NA	NA	False	ATTAAA	-18	NA	150172081	150190384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668_150189504_150190012
ES.25167.6	chr4	+	1451	4	FSM	ENSMUSG00000047875.7	ENSMUST00000094451.4	4900	4	297	3152	297	-3152	multi-exon	FALSE	canonical	2	6	junction_2	1.88561808316413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCAGACATCGCAGTATG	NA	False	NA	NA	False	AATGAA	-12	NA	150172118	150187232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150172594_150183214_150183429_150186036_150186235_150186668
ES.25167.7	chr4	+	5238	4	NNC	ENSMUSG00000047875.7	novel	4900	4	NA	NA	2013	1007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGGCTGAGCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	150173834	150191391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150173938_150183214_150183429_150186036_150186235_150186668
ES.25168.1	chr4	-	173	1	Intergenic	novelGene_20998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAGAAAATATAG	7971	False	NA	NA	False	NA	NA	NA	150193162	150192989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150193000_150193200
ES.25169.1	chr4	+	177	1	Intergenic	novelGene_20999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATCCTGAATTT	6087	False	NA	NA	False	NA	NA	NA	150195288	150195465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150195300_150195500
ES.2517.1	chr10	-	4443	1	Antisense	novelGene_ENSMUSG00000019889.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	28142002	28137559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_28137600_28142000
ES.25170.1	chr4	+	2245	1	Antisense	novelGene_ENSMUSG00000087094.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	520	False	NA	NA	False	NA	NA	NA	150198634	150200879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_150198600_150200900
ES.25171.1	chr4	+	2463	13	ISM	ENSMUSG00000028976.11	ENSMUST00000030826.4	3158	14	388	411	388	-411	3prime_fragment	FALSE	canonical	1	2	junction_6	1.53432938662683	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATAGCAGTTCTCTAC	6013	False	NA	NA	False	AATAAA	-23	NA	150204127	150228215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150204506_150205140_150205223_150210046_150210146_150210582_150210744_150213499_150213625_150220000_150220154_150223877_150224004_150224087_150224276_150224386_150224498_150225215_150225318_150226634_150226711_150227256_150227385_150227481
ES.25171.2	chr4	+	88	1	Intergenic	novelGene_21000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTTT	7457	False	NA	NA	False	NA	NA	NA	150205571	150205659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150205600_150205700
ES.25172.1	chr4	+	1882	10	NNC	ENSMUSG00000062064.7	novel	1578	12	NA	NA	-65	561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.25219761227873	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGGCTCCAGCCCAAGAT	2221	False	NA	NA	False	NA	NA	NA	150233363	150253500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150233480_150233937_150234037_150241894_150242048_150242538_150242665_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
ES.25172.2	chr4	+	1471	7	NIC	ENSMUSG00000062064.7	novel	1578	12	NA	NA	-376	505	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.32006375199925	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACGAACAAA	986	False	NA	NA	False	NA	NA	NA	150241908	150253444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150242048_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
ES.25172.3	chr4	+	3802	8	NNC	ENSMUSG00000062064.7	novel	1578	12	NA	NA	23	2951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.88684045325369	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTTCAATTATATG	1385	False	NA	NA	False	NA	NA	NA	150242307	150255890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150242665_150242931_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720_150255000_150255332
ES.25172.4	chr4	+	1461	6	ISM	ENSMUSG00000062064.7	ENSMUST00000059893.8	1578	12	9374	-505	518	505	3prime_fragment	FALSE	canonical	3	15	junction_5	2.57681974534502	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACGAACAAA	1880	False	NA	NA	False	NA	NA	NA	150242802	150253444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150243123_150244475_150244587_150247654_150247757_150249565_150249642_150250811_150250940_150252720
ES.25173.1	chr4	-	1601	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	-144	3	-144	-3	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTTACTATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	150283071	150271474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
ES.25174.1	chr4	+	260	1	Intergenic	novelGene_21001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCAGCAAGCACATGGT	2248	False	NA	NA	False	NA	NA	NA	150296256	150296516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150296300_150296500
ES.25175.1	chr4	-	159	1	Intergenic	novelGene_21002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATAGTGCACAC	8194	False	NA	NA	False	NA	NA	NA	150307345	150307186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150307200_150307300
ES.25176.1	chr4	+	2331	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	-224	-80	7	80	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGCTTCAGGTTTCCG	NA	False	NA	85	True	NA	NA	NA	150321184	150333416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.10	chr4	+	2890	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	8073	junction_9	2899.0964109529	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGTGCTGGGCATCT	NA	False	NA	-3	True	AATAAA	-14	NA	150321696	150333328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ES.25176.12	chr4	+	1722	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	4590.93915561713	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321696	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332100_150332287_150332397_150332517_150332577_150332942
ES.25176.13	chr4	+	3556	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2891	junction_8	4097.31336853797	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321696	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.17	chr4	+	4901	9	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	2891	junction_7	4147.89747191273	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321698	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517
ES.25176.18	chr4	+	3727	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2891	junction_7	4154.19931522517	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCATCTCATTTGTG	NA	False	NA	5	True	AATAAA	-22	NA	150321698	150333336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.19	chr4	+	2413	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	2891	junction_8	4128.62425149105	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321698	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.2	chr4	+	2132	13	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	5488.47514494387	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321442	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150322144_150322291_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.21	chr4	+	1908	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	8073	junction_10	2945.65562141945	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321698	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ES.25176.22	chr4	+	1726	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5183.00895568498	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGCTGGGCATC	NA	False	NA	-4	True	AATAAA	-13	NA	150321698	150333327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328836_150329577_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.23	chr4	+	1723	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5148.78065802601	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321698	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332949
ES.25176.24	chr4	+	5752	11	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	290	-3649	-1	3649	intron_retention	FALSE	canonical	3	2891	junction_9	3977.34052351568	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	150321698	150336985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517
ES.25176.25	chr4	+	2096	11	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	290	7	-1	-1	intron_retention	FALSE	canonical	3	2891	junction_9	3977.34052351568	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321698	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517
ES.25176.28	chr4	+	2695	1	NIC	ENSMUSG00000063524.14	novel	519	6	NA	NA	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	837	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCCCAACCTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	150321698	150324393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321700_150324400
ES.25176.3	chr4	+	5040	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	91	-3	intron_retention	FALSE	canonical	3	2891	junction_7	3767.88667557823	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGCTGGGCATC	NA	False	NA	-4	True	AATAAA	-13	NA	150321499	150333327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150324024_150325501_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.30	chr4	+	1711	12	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	5207.93534065052	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGCTGGGCATC	NA	False	NA	-4	True	AATAAA	-13	NA	150321700	150333327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332532_150332577_150332942
ES.25176.31	chr4	+	3729	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	8073	junction_9	3072.2284347938	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGTGCTGGGCATCT	NA	False	NA	-3	True	AATAAA	-14	NA	150321700	150333328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ES.25176.34	chr4	+	4697	9	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	2891	junction_6	4048.04316151644	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321703	150333330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.35	chr4	+	2254	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	17	-3	intron_retention	FALSE	canonical	3	9094	junction_7	2659.7602973776	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGCTGGGCATC	NA	False	NA	-4	True	AATAAA	-13	NA	150321716	150333327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517
ES.25176.36	chr4	+	1914	12	NNC	ENSMUSG00000063524.14	novel	1902	8	NA	NA	151	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	4918.63222605702	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGTGCTGGGCATCT	NA	False	NA	-3	True	AATAAA	-14	NA	150322307	150333328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150322592_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.37	chr4	+	4285	7	NIC	ENSMUSG00000063524.14	novel	1902	8	NA	NA	-2205	0	intron_retention	FALSE	canonical	3	8073	junction_6	2315.54121943205	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150325737	150333330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ES.25176.38	chr4	+	2841	6	NIC	ENSMUSG00000063524.14	novel	1902	8	NA	NA	-596	-1	intron_retention	FALSE	canonical	3	8073	junction_5	1541.96998673774	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150327346	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
ES.25176.39	chr4	+	4105	1	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	533	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	900	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150329224	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150329200_150333300
ES.25176.40	chr4	+	1997	5	ISM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	2041	2	-870	-2	3prime_fragment	FALSE	canonical	3	2891	junction_2	2902.05866584396	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGTGTGCTGGGCATCT	NA	False	NA	-3	True	AATAAA	-14	NA	150329983	150333328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.41	chr4	+	449	2	ISM	ENSMUSG00000063524.14	ENSMUST00000136310.2	578	3	493	-243	493	-1	3prime_fragment	FALSE	canonical	3	8073	junction_1	0	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150332514	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150332577_150332942
ES.25176.6	chr4	+	4569	10	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	2891	junction_7	4050.42165157599	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321664	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150321798_150323929_150324024_150325501_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.7	chr4	+	3886	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	2891	junction_8	3877.08334318467	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321674	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ES.25176.8	chr4	+	1873	11	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_8	4796.55342511683	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	150321674	150333329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331166_150331907_150332397_150332517_150332577_150332942
ES.25177.10	chr4	+	5903	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-100	1925	-100	213	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACTATTCTGATCTATT	NA	False	NA	NA	False	AATAAA	-31	NA	150366002	150704498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.11	chr4	+	7936	24	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-98	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.6798038520977	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150366004	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150390054_150390165_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.13	chr4	+	7763	23	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.1330648448463	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150366012	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491071_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.14	chr4	+	7820	23	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	35.5587048077304	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366019	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698175_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.15	chr4	+	7701	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	32.5570143544132	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150366023	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.17	chr4	+	942	2	FSM	ENSMUSG00000039852.18	ENSMUST00000129188.2	417	2	-238	-287	-72	287	multi-exon	FALSE	canonical	2	3	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATCCTCTGTCTCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	150366030	150367210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150366533_150366770
ES.25177.19	chr4	+	5470	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-68	2326	-68	-188	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTTGTTTGTTGA	NA	False	NA	NA	False	ACTAAA	-12	NA	150366034	150704097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.2	chr4	+	7849	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	-116	-5	-116	5	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGGCCAGTGCACTGT	NA	False	NA	24	True	AATAAA	-25	NA	150365986	150706428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.20	chr4	+	7775	23	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-68	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.1591135909923	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	150366034	150706422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554824_150561815_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.21	chr4	+	7647	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-68	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	32.8316671423633	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGTGTGTTGGCCAGT	NA	False	NA	17	True	AATAAA	-18	NA	150366034	150706421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150703481_150703663_150703912
ES.25177.23	chr4	+	7601	23	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	34.097363025449	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150366041	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912_150705291_150705349
ES.25177.24	chr4	+	1159	1	Genic_Genomic	ENSMUSG00000039852.18	novel	NA	NA	NA	NA	-58	280	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTCATTATCCTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	150366044	150367203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150366000_150367200
ES.25177.25	chr4	+	3284	9	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-58	20051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.1765263505661	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGAATGTCTGTCTCT	NA	False	NA	NA	False	AATACA	-15	NA	150366044	150574889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150513865_150515452_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150574653
ES.25177.26	chr4	+	8763	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-58	-1	intron_retention	FALSE	canonical	3	64	junction_3	25.8006486233923	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	150366044	150706422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.27	chr4	+	7995	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-47	1	intron_retention	FALSE	canonical	3	64	junction_3	25.4885150429163	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150366055	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.28	chr4	+	7932	25	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.6305313271439	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150366072	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150444659_150444726_150445819_150445931_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.29	chr4	+	9191	21	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-26	-4	intron_retention	FALSE	canonical	3	64	junction_3	26.3466791076219	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCACCCTGTGTGTTG	NA	False	NA	11	True	AATAAA	-12	NA	150366076	150706415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.3	chr4	+	5393	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-116	-187	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	25.5941638755752	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTTGTTTGTTGAG	NA	False	NA	NA	False	ACTAAA	-13	NA	150365986	150704098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.30	chr4	+	6401	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-17	-184	intron_retention	FALSE	canonical	3	64	junction_3	25.8006486233923	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGTTTGTTGAGAGG	NA	False	NA	NA	False	ACTAAA	-16	NA	150366085	150704101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.31	chr4	+	4349	4	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-15	10683	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.2040487905669	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTGTTGGAAGTAGCAT	NA	False	NA	NA	False	TTTAAA	-8	NA	150366087	150565521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150553151_150553258_150554751_150554849_150561820
ES.25177.32	chr4	+	8281	2	Intergenic	novelGene_21007	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAACGTTTTGAATTT	NA	False	NA	NA	False	NA	NA	NA	150368284	150376776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150369237_150369447
ES.25177.33	chr4	+	176	1	Intergenic	novelGene_21009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	150384364	150384540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150384400_150384500
ES.25177.34	chr4	+	175	1	Intergenic	novelGene_21010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTGAATGACAA	NA	False	NA	NA	False	NA	NA	NA	150384704	150384879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150384700_150384900
ES.25177.35	chr4	+	1627	1	Intergenic	novelGene_21012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAACAACATAACACTT	NA	False	NA	NA	False	NA	NA	NA	150395503	150397130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150395500_150397100
ES.25177.36	chr4	+	3221	1	FSM	ENSMUSG00002075295.1	ENSMUST00020183602.1	110	1	-873	-2238	-873	2238	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTAAGATATTTTTCG	NA	False	NA	NA	False	NA	NA	NA	150404776	150407997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150404800_150408000
ES.25177.37	chr4	+	5395	23	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-34513	-182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.5958144931634	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTGTTGAGAGGAT	NA	False	NA	NA	False	ACTAAA	-18	NA	150456337	150704103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150456734_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698599_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.38	chr4	+	7472	23	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-34276	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.7863898247423	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCACCCTGTGTGTTGGC	NA	False	NA	13	True	AATAAA	-14	NA	150456574	150706417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150456734_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619400_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.39	chr4	+	7289	22	NNC	ENSMUSG00000039852.18	novel	535	4	NA	NA	-34247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.5762163810476	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150456603	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150456721_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.4	chr4	+	7866	23	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-105	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	40.3967922791684	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150365997	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698172_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.40	chr4	+	189	1	Intergenic	novelGene_21015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTACTTA	NA	False	NA	NA	False	NA	NA	NA	150465957	150466146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150466000_150466100
ES.25177.41	chr4	+	7301	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-200	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	29.8359079951607	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGTGTGTTGGCCAGT	2244	False	NA	17	True	AATAAA	-18	NA	150490650	150706421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.43	chr4	+	6692	20	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	40497	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.7610964624822	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150531347	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150531411_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.44	chr4	+	1528	1	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-11408	8131	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150561441	150562969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150561400_150563000
ES.25177.45	chr4	+	179	1	Intergenic	novelGene_21018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	5033	False	NA	NA	False	NA	NA	NA	150578548	150578727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150578500_150578700
ES.25177.46	chr4	+	160	1	Intergenic	novelGene_21019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	150604141	150604301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150604100_150604300
ES.25177.47	chr4	+	5991	13	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-758	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.8353897881816	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150653286	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150653330_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.48	chr4	+	6434	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-384	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	28.7347785792757	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150653660	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.49	chr4	+	6956	12	NIC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-356	1	intron_retention	FALSE	canonical	3	13	junction_10	37.4732962772732	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150653688	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.5	chr4	+	7713	22	NNC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	33.3338095204082	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150365997	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698175_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.51	chr4	+	6165	13	NIC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	41.3604581696093	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150653949	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.53	chr4	+	7669	11	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-52	-2	intron_retention	FALSE	canonical	3	44	junction_1	30.9433353082695	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCACCCTGTGTGTTGGC	NA	False	NA	13	True	AATAAA	-14	NA	150653992	150706417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150698344_150698596_150698711_150698933_150700289_150700397_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.54	chr4	+	6089	13	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-44	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.6440443996545	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGGCCAGTGCACT	NA	False	NA	22	True	AATAAA	-23	NA	150654000	150706426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654144_150654672_150654743_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.55	chr4	+	7533	11	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	44	junction_1	31.4548883323403	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	150654005	150706422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.56	chr4	+	5993	12	NIC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-37	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	45.554798533431	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	150654007	150706422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.57	chr4	+	6087	13	NNC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	42.3083916026124	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150654010	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698175_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.58	chr4	+	6137	13	NNC	ENSMUSG00000039852.18	novel	939	4	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.337129054142	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150654010	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654201_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.59	chr4	+	3763	13	NNC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-27	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.3768583335454	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTGTTTGTTGAGAG	NA	False	NA	NA	False	ACTAAA	-15	NA	150654017	150704100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698172_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.6	chr4	+	7856	23	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_21	31.85300042953	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150365998	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.60	chr4	+	3748	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-27	-194	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	37.0730322771448	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATAATAGTGTTTGTT	NA	False	NA	NA	False	ACTAAA	-6	NA	150654017	150704091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.62	chr4	+	4134	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-20	199	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	37.0730322771448	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTCCACAGACGAC	NA	False	NA	NA	False	AATAAA	-17	NA	150654024	150704484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.63	chr4	+	6438	13	NNC	ENSMUSG00000039852.18	novel	496	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.8862939512931	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTGTTGGCCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	150654024	150706422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654144_150654672_150654743_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150702317_150702862_150703010_150703481_150703663_150703912
ES.25177.65	chr4	+	5953	12	NNC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	558	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	38.4780714624716	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACCCTGTGTGTTGGCC	NA	False	NA	14	True	AATAAA	-15	NA	150654671	150706418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698175_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.66	chr4	+	186	1	Intergenic	novelGene_21022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	5307	False	NA	NA	False	NA	NA	NA	150683446	150683632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150683400_150683600
ES.25177.67	chr4	+	181	2	Intergenic	novelGene_21023	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	281	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAAAAAATTACAGTTA	5310	False	NA	NA	False	NA	NA	NA	150683449	150707109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150683601_150707079
ES.25177.68	chr4	+	2440	1	Intergenic	novelGene_21024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	150688517	150690957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_150688500_150691000
ES.25177.69	chr4	+	7118	6	NIC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-2722	0	intron_retention	FALSE	canonical	3	13	junction_4	51.2663632414081	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150697149	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150697204_150698181_150698344_150698596_150698711_150698933_150703010_150703457_150703663_150703912
ES.25177.70	chr4	+	5251	7	NIC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-1277	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	41.4061857965959	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCACCCTGTGTGTTGGC	NA	False	NA	13	True	AATAAA	-14	NA	150698594	150706417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25177.71	chr4	+	2727	6	NIC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-430	208	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	60.6280463152162	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGACGACTATTCTGAT	NA	False	NA	NA	False	AATAAA	-26	NA	150699441	150704493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703457_150703663_150703912
ES.25177.72	chr4	+	4544	3	NIC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-569	0	intron_retention	FALSE	canonical	3	133	junction_1	16.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150701153	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150703010_150703481_150703663_150703912
ES.25177.73	chr4	+	3501	4	NNC	ENSMUSG00000039852.18	novel	6503	17	NA	NA	-454	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.7511130382116	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCTGTGTGTTGGCCA	NA	False	NA	15	True	AATAAA	-16	NA	150701268	150706419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150701941_150702868_150703010_150703481_150703663_150703912
ES.25177.74	chr4	+	4880	1	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-186	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCACCCTGTGTGTTGG	NA	False	NA	12	True	AATAAA	-13	NA	150701536	150706416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150701500_150706400
ES.25177.75	chr4	+	3774	2	ISM	ENSMUSG00000039852.18	ENSMUST00000136646.2	939	4	-2	-2135	-2	1	intron_retention	FALSE	canonical	3	150	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCTGTGTGTTGGCCAG	NA	False	NA	16	True	AATAAA	-17	NA	150701720	150706420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150701937_150702862
ES.25177.76	chr4	+	3493	1	Genic_Genomic	ENSMUSG00000039852.18	novel	NA	NA	NA	NA	1898	690	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAGTTACGAA	NA	False	NA	NA	False	NA	NA	NA	150703620	150707113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_150703600_150707100
ES.25177.8	chr4	+	7706	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	30.0910937471953	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366001	150706423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
ES.25178.1	chr4	-	176	1	Intergenic	novelGene_21003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	150317302	150317126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150317100_150317300
ES.25178.2	chr4	-	178	2	Antisense	novelGene_ENSMUSG00000039852.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	150369445	150317126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150317207_150369347
ES.25178.3	chr4	-	3808	1	Antisense	novelGene_ENSMUSG00000063524.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTATCCCCCCACCCCA	NA	False	NA	NA	False	NA	NA	NA	150329156	150325348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150325300_150329200
ES.25178.4	chr4	-	190	1	Intergenic	novelGene_21004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	150338143	150337953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150338000_150338100
ES.25178.5	chr4	-	3718	1	Intergenic	novelGene_21005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150343749	150340031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150340000_150343700
ES.25178.6	chr4	-	176	2	Antisense	novelGene_ENSMUSG00000039852.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150369443	150358279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150358292_150369279
ES.25178.7	chr4	-	175	2	Antisense	novelGene_ENSMUSG00000039852.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150369444	150358281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150358334_150369321
ES.25178.8	chr4	-	178	1	Intergenic	novelGene_21006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150363911	150363733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150363700_150363900
ES.25179.1	chr4	-	170	1	Intergenic	novelGene_21008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTTGCAGCATTCA	NA	False	NA	NA	False	NA	NA	NA	150383229	150383059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150383100_150383200
ES.2518.1	chr10	-	1577	1	Intergenic	novelGene_1910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCACCAAGGCAGATTCA	NA	False	NA	NA	False	NA	NA	NA	28154818	28153241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_28153200_28154800
ES.25180.1	chr4	-	172	1	Intergenic	novelGene_21011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTACTCCC	NA	False	NA	NA	False	NA	NA	NA	150392153	150391981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150392000_150392200
ES.25180.2	chr4	-	163	2	Antisense	novelGene_ENSMUSG00002075295.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150423072	150391992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150392075_150422991
ES.25180.3	chr4	-	5298	1	Intergenic	novelGene_21013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150413813	150408515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150408500_150413800
ES.25181.1	chr4	-	178	1	Intergenic	novelGene_21014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	150451869	150451691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150451700_150451900
ES.25182.1	chr4	-	154	1	Intergenic	novelGene_21016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAATCAAGCTT	NA	False	NA	NA	False	NA	NA	NA	150468351	150468197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150468200_150468400
ES.25183.1	chr4	-	2661	1	Intergenic	novelGene_21017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCTCCCCATAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	150488783	150486122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150486100_150488800
ES.25184.1	chr4	-	7428	1	Intergenic	novelGene_21020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	150617125	150609697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150609700_150617100
ES.25185.1	chr4	-	173	1	Intergenic	novelGene_21021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	150623196	150623023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150623000_150623200
ES.25186.1	chr4	-	2822	1	Genic_Genomic	ENSMUSG00000085213.2	novel	NA	NA	NA	NA	-1556	-410	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGCTTAACCCTGCAGG	NA	False	NA	NA	False	NA	NA	NA	150654557	150651735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_150651700_150654600
ES.25187.1	chr4	-	1962	7	ISM	ENSMUSG00000039838.12	ENSMUST00000037827.10	3387	9	8824	825	739	650	3prime_fragment	FALSE	canonical	0	0	junction_5	1.21335164821342	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGGGTTCGAGGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	150727807	150713853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_150714255_150715374_150715581_150717769_150717947_150719343_150719498_150722430_150723168_150726902_150727128_150727745
ES.25188.1	chr4	-	177	1	Intergenic	novelGene_21025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGTGGGCGC	NA	False	NA	NA	False	NA	NA	NA	150764399	150764222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150764200_150764400
ES.25189.1	chr4	-	161	1	Intergenic	novelGene_21026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCCA	2484	False	NA	NA	False	NA	NA	NA	150797117	150796956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150797000_150797100
ES.2519.1	chr10	-	175	1	Intergenic	novelGene_1912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28181712	28181537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_28181500_28181700
ES.25190.1	chr4	+	1179	2	Antisense	novelGene_ENSMUSG00000078492.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	150908182	150916058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_150908260_150914956
ES.25191.1	chr4	+	3048	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	-3	-2	-3	2	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTCTTGTCTAAACT	3778	False	NA	NA	False	AATAAA	-30	NA	150939526	150953346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
ES.25191.10	chr4	+	5449	3	ISM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	7399	-2	7399	2	3prime_fragment	FALSE	canonical	3	303	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTCTTGTCTAAACT	1594	False	NA	NA	False	AATAAA	-30	NA	150946928	150953346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150949727_150949820_150949898_150950772
ES.25191.11	chr4	+	3859	1	NIC	ENSMUSG00000028967.11	novel	3036	4	NA	NA	9945	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCGTTAATAATGTG	4140	False	NA	NA	False	AATAAA	-17	NA	150949474	150953333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150949500_150953300
ES.25191.2	chr4	+	2770	2	NIC	ENSMUSG00000028967.11	novel	3043	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3782	False	NA	NA	False	AATAAA	-28	NA	150939530	150953344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150939729_150950772
ES.25191.3	chr4	+	453	2	FSM	ENSMUSG00000028967.11	ENSMUST00000128640.8	546	2	1	92	1	-92	multi-exon	FALSE	canonical	2	4	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGAGTTGTTCCGTGGCC	3782	False	NA	NA	False	TTTAAA	-22	NA	150939530	150940179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_150939729_150939924
ES.25191.4	chr4	+	4329	1	NIC	ENSMUSG00000028967.11	novel	3043	4	NA	NA	1	3588	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCATCATTAGCCCAT	3782	False	NA	NA	False	AATAAA	-20	NA	150939530	150943859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_150939500_150943900
ES.25191.5	chr4	+	3126	5	NNC	ENSMUSG00000028967.11	novel	3043	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.5	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAATGTGTCTTGTCTA	3782	False	NA	NA	False	AATAAA	-26	NA	150939530	150953342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150939729_150940212_150940299_150949531_150949727_150949820_150949898_150950772
ES.25191.6	chr4	+	3116	5	NNC	ENSMUSG00000028967.11	novel	3043	4	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.5	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAATGTGTCTTGTCTA	3783	False	NA	NA	False	AATAAA	-26	NA	150939531	150953342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150939729_150947929_150948007_150949531_150949727_150949820_150949898_150950772
ES.25191.7	chr4	+	3914	3	ISM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	4	0	4	0	intron_retention	FALSE	canonical	3	303	junction_2	20.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3785	False	NA	NA	False	AATAAA	-28	NA	150939533	150953344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_150939729_150949531_150949727_150949820
ES.25191.8	chr4	+	3261	4	NNC	ENSMUSG00000028967.11	novel	3043	4	NA	NA	196	0	intron_retention	FALSE	canonical	1	2	junction_1	141.892760758101	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3977	False	NA	NA	False	AATAAA	-28	NA	150939725	150953344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150940143_150949531_150949727_150949820_150949898_150950772
ES.25191.9	chr4	+	3160	4	NNC	ENSMUSG00000028967.11	novel	546	2	NA	NA	246	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	142.364165278892	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCGTTAATAATGTGTC	4027	False	NA	NA	False	AATAAA	-19	NA	150939775	150953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_150940101_150949531_150949727_150949820_150949898_150950772
ES.25192.1	chr4	-	1252	4	Antisense	novelGene_ENSMUSG00000028967.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGACGCCGGCGCAGCCGA	NA	False	NA	NA	False	NA	NA	NA	150951556	150939532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150939728_150949530_150949727_150949820_150949897_150950771
ES.25192.2	chr4	-	2123	3	Antisense	novelGene_ENSMUSG00000028967.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCGACGCCGGCGCAG	NA	False	NA	NA	False	NA	NA	NA	150951556	150939536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150939728_150949530_150949727_150949820
ES.25192.3	chr4	-	10758	2	Antisense	novelGene_ENSMUSG00000028967.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATTTATACCTCACCTT	NA	False	NA	NA	False	NA	NA	NA	150951556	150940587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150946135_150946345
ES.25193.1	chr4	-	3627	3	Antisense	novelGene_ENSMUSG00000028967.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAATTGGTTATCCTGC	NA	False	NA	NA	False	AATACA	-15	NA	150964056	150952274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_150955306_150956892_150957159_150963726
ES.25194.1	chr4	-	160	1	Intergenic	novelGene_21027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	150971245	150971085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_150971100_150971200
ES.25195.1	chr4	-	904	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	6	-2	6	2	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCTGGGGTCTTTTG	NA	False	NA	1	True	AATAAA	-28	NA	150994377	150981587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.10	chr4	-	574	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2141.87587175354	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994300	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981675_150985460_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.11	chr4	-	832	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_6	2147.49225842609	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994287	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994218
ES.25195.12	chr4	-	725	5	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	170	junction_2	2381.02061887334	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994331	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150991496_150991599_150992774_150992881_150994239
ES.25195.13	chr4	-	1176	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105673.8	919	7	-152	-105	25	-1	multi-exon	FALSE	canonical	3	11	junction_6	2143.40985477709	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994260	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993847
ES.25195.15	chr4	-	1063	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	26	-1	intron_retention	FALSE	canonical	0	0	junction_3	2159.91996379496	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994259	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989426_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.16	chr4	-	2172	6	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	17	-1	intron_retention	FALSE	canonical	3	153	junction_5	2271.67062753384	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994308	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150989767_150991496_150991599_150992774_150992881_150994264
ES.25195.17	chr4	-	825	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	153	junction_6	2090.71572673092	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994326	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994264
ES.25195.18	chr4	-	2137	6	ISM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	129	1	31	-1	intron_retention	FALSE	canonical	3	5402	junction_3	214.153776525188	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994254	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774
ES.25195.2	chr4	-	598	4	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-4	1	intron_retention	FALSE	canonical	1	2	junction_1	2661.84351322329	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGGGGTCTTTT	NA	False	NA	0	True	AATAAA	-27	NA	150994289	150981588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150991496_150991599_150992774_150992881_150994239
ES.25195.20	chr4	-	818	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	29	-1	intron_retention	FALSE	canonical	3	51	junction_3	2289.39637459309	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994354	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150991496_150991599_150992774_150992881_150994239
ES.25195.21	chr4	-	1030	8	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	5	-1	intron_retention	FALSE	canonical	3	96	junction_2	2436.39795181162	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994320	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150987897_150988084_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.22	chr4	-	1425	7	NIC	ENSMUSG00000028964.15	novel	919	7	NA	NA	15	-1	intron_retention	FALSE	canonical	3	277	junction_6	2044.71068994016	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994310	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993648
ES.25195.23	chr4	-	825	6	NIC	ENSMUSG00000028964.15	novel	882	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	51	junction_3	2764.57384781091	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	5725	False	NA	-2	True	AATAAA	-25	NA	150998898	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150991496_150991599_150992774_150992881_150998776
ES.25195.24	chr4	-	3382	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	450	junction_2	1944.55321917972	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994326	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150988084_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.26	chr4	-	8425	4	FSM	ENSMUSG00000028964.15	ENSMUST00000134751.8	478	4	44	-7991	4	-2	multi-exon	FALSE	canonical	3	5627	junction_3	104.487107125978	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTGTGTCTGGGGTCT	NA	False	NA	-3	True	AATAAA	-24	NA	150994281	150981591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.27	chr4	-	4928	5	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	5627	junction_4	90.6724875582445	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTGTGTCTGGGGTCT	NA	False	NA	-3	True	AATAAA	-24	NA	150994320	150981591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.29	chr4	-	3467	5	NIC	ENSMUSG00000028964.15	novel	919	7	NA	NA	65	-2	intron_retention	FALSE	canonical	3	5670	junction_4	148.200033738188	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTGTGTCTGGGGTCT	NA	False	NA	-3	True	AATAAA	-24	NA	150994220	150981591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150989767_150991496_150991599_150992774
ES.25195.3	chr4	-	7041	5	FSM	ENSMUSG00000028964.15	ENSMUST00000148626.2	640	5	25	-6426	25	0	multi-exon	FALSE	canonical	3	5402	junction_1	165.252080168451	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994260	150981589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.31	chr4	-	761	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-22	-5	intron_retention	FALSE	canonical	3	66	junction_5	2285.59791739492	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	False	NA	-6	True	AATAAA	-21	NA	150994347	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150994239
ES.25195.32	chr4	-	877	7	NNC	ENSMUSG00000028964.15	novel	882	7	NA	NA	1	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	2628.42637755411	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	5730	False	NA	-6	True	AATAAA	-21	NA	150998893	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991495_150991599_150992774_150992881_150998776
ES.25195.33	chr4	-	743	6	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	17	-5	intron_retention	FALSE	canonical	3	51	junction_3	2798.42717253817	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	False	NA	-6	True	AATAAA	-21	NA	150994308	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150991496_150991599_150992774_150992881_150994264
ES.25195.34	chr4	-	806	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-8	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	2129.06622724611	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	False	NA	-6	True	AATAAA	-21	NA	150994293	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989760_150991496_150991599_150992774_150992881_150994239
ES.25195.35	chr4	-	3524	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	1	-5	intron_retention	FALSE	canonical	3	5402	junction_2	150.180424822944	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	False	NA	-6	True	AATAAA	-21	NA	150994284	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.36	chr4	-	4389	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	5402	junction_2	218.852827260696	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	False	NA	-6	True	AATAAA	-21	NA	150994333	150981594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.4	chr4	-	5702	5	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	5627	junction_4	166.825320320388	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994276	150981589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150985552_150988271_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.42	chr4	-	2182	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-14	5	intron_retention	FALSE	canonical	3	5627	junction_5	153.902046770015	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTACCTTTGTGTCTGG	NA	False	NA	-8	True	AATAAA	-19	NA	150994299	150981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.43	chr4	-	1200	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-2	5	intron_retention	FALSE	canonical	3	17	junction_3	2153.59789396463	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTACCTTTGTGTCTGG	NA	False	NA	-8	True	AATAAA	-19	NA	150994327	150981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989351_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.44	chr4	-	3824	4	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	8	5	intron_retention	FALSE	canonical	3	66	junction_3	2742.54897657068	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTACCTTTGTGTCTGG	NA	False	NA	-8	True	AATAAA	-19	NA	150994317	150981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150991599_150994239
ES.25195.45	chr4	-	3860	5	NIC	ENSMUSG00000028964.15	novel	919	7	NA	NA	30	3	intron_retention	FALSE	canonical	3	5402	junction_3	228.383859981392	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCTACCTTTGTGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	150994255	150981598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150991599_150992774
ES.25195.46	chr4	-	2002	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	14	2	intron_retention	FALSE	canonical	3	5402	junction_3	217.564151458828	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGCTACCTTTGTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	150994311	150981599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150992881_150994239
ES.25195.47	chr4	-	640	4	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	22	2	intron_retention	FALSE	canonical	3	66	junction_3	2635.49329137619	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGCTACCTTTGTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	150994361	150981599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150991496_150991599_150994239
ES.25195.48	chr4	-	832	7	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_4	2129.06622724611	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCAGCTACCTTTGTG	NA	False	NA	-13	True	AATAAA	-14	NA	150994308	150981601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991485_150991599_150992774_150992881_150994239
ES.25195.49	chr4	-	3220	5	NNC	ENSMUSG00000028964.15	novel	640	5	NA	NA	-14	-1160	intron_retention	FALSE	canonical	3	450	junction_1	2284.34722623335	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTCCTGTGTCACGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	150994299	150986626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150988084_150988271_150989767_150991496_150991599_150992774_150992881_150994239
ES.25195.5	chr4	-	6649	4	NNC	ENSMUSG00000028964.15	novel	908	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	153	junction_3	2609.74153679802	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994334	150981589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_150981929_150985464_150991599_150992774_150992881_150994264
ES.25195.7	chr4	-	2538	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	5402	junction_3	206.717778625836	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994284	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150991599_150992774_150992881_150994239
ES.25195.8	chr4	-	3939	5	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	5	-1	intron_retention	FALSE	canonical	3	5627	junction_4	165.599667874063	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTGTGTCTGGGGTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	150994320	150981590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_150981929_150985464_150985552_150988271_150991599_150992774_150992881_150994239
ES.25196.1	chr4	+	171	1	Intergenic	novelGene_21028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	151012991	151013162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151013000_151013200
ES.25197.1	chr4	-	205	1	Intergenic	novelGene_21029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGTGAAGCAGAACT	2130	False	NA	NA	False	NA	NA	NA	151042497	151042292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151042300_151042500
ES.25198.1	chr4	+	435	1	Antisense	novelGene_ENSMUSG00000028957.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151088646	151089081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_151088600_151089100
ES.25199.1	chr4	-	2161	12	FSM	ENSMUSG00000028957.13	ENSMUST00000128283.2	2139	12	-17	-5	-17	5	multi-exon	FALSE	canonical	0	0	junction_1	1.23315090602278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTAGTCTGTTTCCT	304	False	NA	NA	False	AATAAA	-23	NA	151129139	151108641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151108997_151109528_151109658_151110569_151110676_151113205_151113363_151113592_151113700_151116369_151116449_151118313_151118454_151122345_151122395_151125728_151125931_151127132_151127249_151128015_151128162_151128564
ES.25199.2	chr4	-	4056	6	NIC	ENSMUSG00000028957.13	novel	2139	12	NA	NA	-62	-6884	intron_retention	FALSE	canonical	1	1	junction_2	1.46969384566991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAGGAAAAAAAAAAA	259	False	NA	NA	False	NA	NA	NA	151129184	151115530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151118454_151122345_151122395_151125728_151125931_151127132_151127249_151128015_151128162_151128564
ES.252.1	chr1	+	156	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35113221	35113377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_35113200_35113400
ES.2520.1	chr10	-	179	1	Intergenic	novelGene_1915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	28244858	28244679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_28244700_28244900
ES.25200.1	chr4	+	172	1	Intergenic	novelGene_21030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACCTG	NA	False	NA	NA	False	NA	NA	NA	151130589	151130761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151130600_151130800
ES.25201.1	chr4	-	3922	3	FSM	ENSMUSG00000028955.4	ENSMUST00000155446.2	822	3	5	-3105	5	-4	multi-exon	FALSE	canonical	3	150	junction_2	38.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCGTGTTTCTTGG	NA	False	NA	-1	True	AATAAA	-18	NA	151142398	151131760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151135533_151140618_151140701_151142330
ES.25201.2	chr4	-	2248	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	-133	5	-123	-5	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGTCGTGTTTCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	151142543	151131761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ES.25201.3	chr4	-	2153	5	NNC	ENSMUSG00000028955.4	novel	2120	5	NA	NA	103	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	94.3239100122551	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGTCGTGTTTCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	151142300	151131761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142182
ES.25202.1	chr4	-	5207	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	45	-291	45	2	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTTTTGCTTTAA	NA	False	NA	0	True	ATTAAA	-22	NA	151192988	151143979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.10	chr4	-	5176	12	NIC	ENSMUSG00000014592.22	novel	8533	23	NA	NA	41	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	7.20881003694509	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCCTTTCTGGCTGCA	NA	False	NA	NA	False	AATAAA	-11	NA	151192719	151144272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192627
ES.25202.11	chr4	-	3475	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	159	1327	-114	-1327	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGGACAAAATGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	151192874	151145597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.12	chr4	-	3164	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	61	1736	61	-1736	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTAGTGGCTATGGTCTG	NA	False	NA	NA	False	ATTAAA	-42	NA	151192972	151146006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.13	chr4	-	2409	1	Intergenic	novelGene_21031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCGTGGAAGGGGTTC	NA	False	NA	NA	False	TATAAA	-35	NA	151192067	151189658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151189700_151192100
ES.25202.3	chr4	-	4720	3	ISM	ENSMUSG00000014592.22	ENSMUST00000140030.8	3983	6	3389	-2	3389	1	3prime_fragment	FALSE	canonical	3	17	junction_2	1	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTGTTTTGCTTTA	NA	False	NA	-1	True	ATTAAA	-21	NA	151160861	151143980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_151147313_151158444_151158520_151159548
ES.25202.4	chr4	-	5234	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	38	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTGTTTTGCTTTA	NA	False	NA	-1	True	ATTAAA	-21	NA	151192995	151143980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.5	chr4	-	5539	12	NIC	ENSMUSG00000014592.22	novel	8533	23	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	5.03541179059136	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATCTGTGTTTTGCTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	151192983	151143981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.6	chr4	-	6469	12	NIC	ENSMUSG00000014592.22	novel	4961	12	NA	NA	65	-2	intron_retention	FALSE	canonical	1	1	junction_3	7.04882617272005	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATTATCTGTGTTTTGC	NA	False	NA	-5	True	ATTAAA	-17	NA	151192968	151143984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.7	chr4	-	5561	13	NIC	ENSMUSG00000014592.22	novel	8423	24	NA	NA	45	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.29114319955671	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATATTATCTGTGTTTTG	NA	False	NA	-6	True	ATTAAA	-16	NA	151192988	151143985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.8	chr4	-	4913	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	50	-2	50	2	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCTGGCTGCACGGT	NA	False	NA	NA	False	AATAAA	-15	NA	151192983	151144268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25202.9	chr4	-	4926	13	NIC	ENSMUSG00000014592.22	novel	4962	14	NA	NA	55	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.16624148553054	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCCTTTCTGGCTGCAC	NA	False	NA	NA	False	AATAAA	-12	NA	151192978	151144271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ES.25203.1	chr4	+	172	1	Intergenic	novelGene_21032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAACACCGGATACC	NA	False	NA	10	True	NA	NA	NA	151196845	151197017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151196800_151197000
ES.25204.1	chr4	+	3774	1	Intergenic	novelGene_21033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151204485	151208259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151204500_151208300
ES.25205.1	chr4	-	198	1	Intergenic	novelGene_21034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAACAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	151274175	151273977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151274000_151274200
ES.25206.1	chr4	-	6426	1	Intergenic	novelGene_21035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGAGCGTGCTTCGT	NA	False	NA	NA	False	AATAAA	-18	NA	151530186	151523760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151523800_151530200
ES.25207.1	chr4	-	6370	1	Intergenic	novelGene_21036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAACAACAACACCAAA	NA	False	NA	NA	False	NA	NA	NA	151551997	151545627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151545600_151552000
ES.25208.1	chr4	-	1023	5	NIC	ENSMUSG00000014592.22	novel	1814	8	NA	NA	2	141823	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	492.638305453403	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCCTGGCTCCTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	151946201	151723086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151723606_151724052_151724248_151914874_151914994_151920270_151920341_151946081
ES.25208.10	chr4	-	2926	7	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	498.975505967533	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151866931_151866978_151867221_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.11	chr4	-	1020	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	484.496852414956	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151865390_151874864_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.12	chr4	-	10494	5	NIC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	29	junction_1	424.464662840147	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGAGTGGGCCACTAGT	NA	False	NA	NA	False	NA	NA	NA	151946203	151864911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.13	chr4	-	12240	3	NIC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	0	-2	intron_retention	FALSE	canonical	1	5	junction_1	498.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGAGTGGGCCACTAGT	NA	False	NA	NA	False	NA	NA	NA	151946203	151864911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151876960_151920270_151920341_151946081
ES.25208.14	chr4	-	934	5	ISM	ENSMUSG00000014592.22	ENSMUST00000153938.3	2178	6	-30	9550	4	571	5prime_fragment	FALSE	canonical	3	29	junction_1	424.464662840147	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTGTTTGCCTGGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	151946191	151874459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.15	chr4	-	1209	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-41	1030	1	626	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACACCACTCCCTAGA	NA	False	NA	NA	False	AATAAA	-28	NA	151946202	151876060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.16	chr4	-	1050	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-52	1200	-10	456	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCACAATGTTTTTTGT	NA	False	NA	NA	False	CATAAA	-19	NA	151946213	151876230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.17	chr4	-	1095	5	NNC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	0	369	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	499.788705354573	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTTATCTCATTA	NA	False	NA	NA	False	ATTAAA	-9	NA	151946203	151876317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151876960_151914874_151914994_151915132_151915275_151920270_151920341_151946081
ES.25208.18	chr4	-	622	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-64	1640	-22	16	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAGTTTAATGAGT	NA	False	NA	-7	True	AATAAA	-26	NA	151946225	151876670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.19	chr4	-	740	5	NNC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	499.788705354573	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTAAGTTTAATGAG	NA	False	NA	-8	True	AATAAA	-25	NA	151946202	151876671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151876960_151914874_151914994_151915132_151915275_151920270_151920341_151946081
ES.25208.2	chr4	-	1902	1	Intergenic	novelGene_21037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGGAGTTCTGAGACT	NA	False	NA	NA	False	AATAAA	-13	NA	151826465	151824563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_151824600_151826500
ES.25208.21	chr4	-	533	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	-14	-13	-6	13	multi-exon	FALSE	canonical	3	63	junction_2	493.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTTAAGTTTAATG	NA	False	NA	-10	True	AATAAA	-23	NA	151946209	151876673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151876960_151914874_151914994_151946081
ES.25208.22	chr4	-	777	5	NNC	ENSMUSG00000014592.22	novel	2198	4	NA	NA	-34	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	492.388756471957	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATTTAAGTTTAA	NA	False	NA	-12	True	AATAAA	-21	NA	151946237	151876675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151876960_151899141_151899290_151914874_151914994_151920270_151920341_151946081
ES.25208.23	chr4	-	4286	4	NNC	ENSMUSG00000014592.22	novel	5208	25	NA	NA	1	-34146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	464.764456472308	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAACTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151946202	151910832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151912703_151912768_151914994_151920270_151920341_151946081
ES.25208.24	chr4	-	4278	2	ISM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	-7	34150	1	-34150	5prime_fragment	FALSE	canonical	3	63	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	151946202	151910836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_151914994_151946081
ES.25208.25	chr4	-	4214	3	NNC	ENSMUSG00000014592.22	novel	5208	25	NA	NA	1	-34150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	151946202	151910836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151912705_151912768_151914994_151946081
ES.25208.26	chr4	-	7172	2	Genic_Genomic	ENSMUSG00000014592.22	novel	5208	25	NA	NA	28053	-34150	multi-exon	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAACTTAA	3693	False	NA	NA	False	NA	NA	NA	151918054	151910836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_151912761_151912806
ES.25208.3	chr4	-	5434	1	Genic_Genomic	ENSMUSG00000014592.22	novel	NA	NA	NA	NA	78310	2546	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151867797	151862363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_151862400_151867800
ES.25208.4	chr4	-	2257	6	FSM	ENSMUSG00000014592.22	ENSMUST00000153938.3	2178	6	-64	-15	-22	15	multi-exon	FALSE	canonical	1	1	junction_1	486.741574143816	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGCGTTTTTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	151946225	151864894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_151866589_151874864_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.5	chr4	-	10436	4	NIC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	1	11	intron_retention	FALSE	canonical	3	29	junction_1	473.493634827568	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTAGTGTTGCGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	151946202	151864898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_151875011_151876875_151876960_151914874_151914994_151946081
ES.25208.6	chr4	-	2337	7	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	499.3144188674	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTAGTGTTGCGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	151946173	151864899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151866589_151866707_151866845_151874864_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.7	chr4	-	2275	5	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	440.984693611921	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCCACTAGTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	151946201	151864905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151946081
ES.25208.8	chr4	-	10452	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	486.991991720603	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946204	151864909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151866972_151867016_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25208.9	chr4	-	2335	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	485.492492217954	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946195	151864909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ES.25209.1	chr4	+	1137	1	Intergenic	novelGene_21038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATGTTTTGTATTGT	NA	False	NA	NA	False	AATAAA	-9	NA	151946624	151947761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151946600_151947800
ES.25209.2	chr4	+	782	2	Intergenic	novelGene_21039	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATGTTTTGTATTGT	NA	False	NA	NA	False	AATAAA	-9	NA	151946673	151947761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_151947315_151947620
ES.2521.1	chr10	-	223	1	Intergenic	novelGene_1918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAGAAGTATAATCCACT	NA	False	NA	NA	False	NA	NA	NA	28608705	28608482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_28608500_28608700
ES.25210.1	chr4	-	194	1	Intergenic	novelGene_21040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	152003209	152003015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152003000_152003200
ES.25211.1	chr4	+	180	1	Intergenic	novelGene_21041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	1156	False	NA	NA	False	NA	NA	NA	152010233	152010413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152010200_152010400
ES.25212.1	chr4	+	179	1	Intergenic	novelGene_21042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAATGGT	6166	False	NA	NA	False	NA	NA	NA	152015243	152015422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152015200_152015400
ES.25213.1	chr4	+	3010	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	-37	178	-37	-178	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTCCATCTGTGTGT	9033	False	NA	22	True	NA	NA	NA	152018110	152066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.10	chr4	+	2998	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	216.086445759137	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTCTGGCTATGTGGC	9098	False	NA	NA	False	NA	NA	NA	152018175	152066592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.11	chr4	+	2847	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-7	-185	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	228.73748432361	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACTTCTGTCCATC	9103	False	NA	15	True	NA	NA	NA	152018180	152066409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.12	chr4	+	3283	14	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	57	junction_5	224.018041327561	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9103	False	NA	28	True	TATAAA	-20	NA	152018180	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.13	chr4	+	1874	13	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	246.916469794049	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9104	False	NA	26	True	TATAAA	-18	NA	152018181	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.14	chr4	+	3054	17	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	288.537015606317	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGGAAACTAGTCTC	9105	False	NA	31	True	TATAAA	-23	NA	152018182	152065682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152056665_152057516_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.16	chr4	+	3362	16	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	222.145557886915	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9106	False	NA	26	True	TATAAA	-18	NA	152018183	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152056772_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.17	chr4	+	5145	14	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_7	237.722975367867	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9106	False	NA	24	True	TATAAA	-16	NA	152018183	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152056235_152056275_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.18	chr4	+	5187	14	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	755	junction_7	73.8374994928793	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9106	False	NA	28	True	TATAAA	-20	NA	152018183	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.19	chr4	+	3397	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	2	intron_retention	FALSE	canonical	3	755	junction_7	68.3096192467258	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9110	False	NA	26	True	TATAAA	-18	NA	152018187	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.2	chr4	+	2323	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	-31	859	-31	51	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCCAGGCCCTGACTT	9039	False	NA	84	True	NA	NA	NA	152018116	152065735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.20	chr4	+	3963	7	NNC	ENSMUSG00000039768.17	novel	5607	12	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	334.1087647259	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9111	False	NA	24	True	TATAAA	-16	NA	152018188	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054741_152063241_152064505_152065159
ES.25213.21	chr4	+	3039	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	-183	intron_retention	FALSE	canonical	3	755	junction_7	71.3067890404925	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACTTCTGTCCATCTG	9113	False	NA	17	True	NA	NA	NA	152018190	152066411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152064044_152064374_152064505_152065159
ES.25213.22	chr4	+	4148	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	-178	intron_retention	FALSE	canonical	3	755	junction_6	70.225620361105	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTCCATCTGTGTGT	9113	False	NA	22	True	NA	NA	NA	152018190	152066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.23	chr4	+	1045	8	NNC	ENSMUSG00000039768.17	novel	3841	9	NA	NA	0	1095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	305.021176916205	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTAGGGTAT	9113	False	NA	NA	False	NA	NA	NA	152018190	152057094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152056772
ES.25213.24	chr4	+	4313	4	FSM	ENSMUSG00000039768.17	ENSMUST00000133959.8	688	4	1	-3626	1	3626	multi-exon	FALSE	canonical	3	865	junction_1	56.0079359456219	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATTAAATTAAATTAA	9114	False	NA	NA	False	NA	NA	NA	152018191	152045578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559
ES.25213.25	chr4	+	4085	9	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_5	393.010814100579	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9114	False	NA	26	True	TATAAA	-18	NA	152018191	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053977_152061907_152063787_152063900_152064044_152064374_152064503_152065159
ES.25213.26	chr4	+	2063	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	216.086445759137	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAATGGGTTTGGAAA	9115	False	NA	23	True	TATAAA	-15	NA	152018192	152065674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.27	chr4	+	5918	15	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_6	229.935394653119	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTTTGGAAACTAGTC	9115	False	NA	29	True	TATAAA	-21	NA	152018192	152065680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152056235_152056275_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.29	chr4	+	3082	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	46	23	-2	-23	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTCATGTTTGCATTT	9116	False	NA	NA	False	NA	NA	NA	152018193	152066571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.3	chr4	+	6322	14	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-15	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	237.947038013522	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACAATGGGTTTGGAA	9055	False	NA	22	True	TATAAA	-14	NA	152018132	152065673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152056235_152056275_152058127_152058216_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.30	chr4	+	3503	14	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	755	junction_7	70.3853299669485	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9116	False	NA	24	True	TATAAA	-16	NA	152018193	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152064044_152064374_152064505_152065159
ES.25213.31	chr4	+	8096	11	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-2	-182	intron_retention	FALSE	canonical	3	755	junction_7	78.4798700304734	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTCTGTCCATCTGT	9116	False	NA	18	True	NA	NA	NA	152018193	152066412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.33	chr4	+	4823	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-1	2	intron_retention	FALSE	canonical	3	755	junction_7	71.1996331107264	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9117	False	NA	26	True	TATAAA	-18	NA	152018194	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.34	chr4	+	3829	13	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	755	junction_7	73.3985978521843	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9117	False	NA	24	True	TATAAA	-16	NA	152018194	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058771_152061406_152061563_152062455_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.36	chr4	+	4697	16	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	222.145557886915	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9117	False	NA	28	True	TATAAA	-20	NA	152018194	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152056235_152056275_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.37	chr4	+	2790	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-1	-191	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	216.086445759137	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGAGGCCACTTCTG	9117	False	NA	9	True	NA	NA	NA	152018194	152066403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.39	chr4	+	7278	11	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	763	junction_7	70.7604409257037	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAATGGGTTTGGAAA	9119	False	NA	23	True	TATAAA	-15	NA	152018196	152065674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.4	chr4	+	2602	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-15	0	intron_retention	FALSE	canonical	3	755	junction_7	71.8878094175719	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9055	False	NA	28	True	TATAAA	-20	NA	152018132	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.40	chr4	+	3401	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	755	junction_6	70.225620361105	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9119	False	NA	24	True	TATAAA	-16	NA	152018196	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.41	chr4	+	4770	9	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	-183	intron_retention	FALSE	non_canonical	0	0	junction_5	302.410704795647	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACTTCTGTCCATCTG	9119	False	NA	17	True	NA	NA	NA	152018196	152066411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053929_152061905_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.42	chr4	+	2153	16	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	222.181067300224	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	9119	False	NA	26	True	TATAAA	-18	NA	152018196	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058248_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.43	chr4	+	4117	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	-184	intron_retention	FALSE	canonical	3	755	junction_7	68.3096192467258	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCACTTCTGTCCATCT	9123	False	NA	16	True	NA	NA	NA	152018200	152066410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.44	chr4	+	3075	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	755	junction_7	71.8321456094494	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9124	False	NA	28	True	TATAAA	-20	NA	152018201	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.45	chr4	+	3434	13	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	4060	2	intron_retention	FALSE	canonical	3	755	junction_5	75.0744075345698	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	7035	False	NA	26	True	TATAAA	-18	NA	152034848	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152064044_152064374_152064505_152065159
ES.25213.46	chr4	+	2867	1	Intergenic	novelGene_21044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTTAGGATCCTAG	9759	False	NA	NA	False	NA	NA	NA	152037572	152040439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152037600_152040400
ES.25213.47	chr4	+	3282	13	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	22026	917	-1426	2	3prime_fragment	FALSE	canonical	3	755	junction_4	61.9327592366646	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	811	False	NA	26	True	TATAAA	-18	NA	152040173	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.48	chr4	+	1913	13	NNC	ENSMUSG00000039768.17	novel	786	6	NA	NA	2480	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.671736154442	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	4717	False	NA	26	True	TATAAA	-18	NA	152044079	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152044199_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.49	chr4	+	5081	12	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	32253	185	-1894	-185	3prime_fragment	FALSE	canonical	3	755	junction_3	63.8464066049424	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACTTCTGTCCATC	NA	False	NA	15	True	NA	NA	NA	152050400	152066409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.5	chr4	+	4332	14	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	10	0	intron_retention	FALSE	canonical	3	755	junction_5	69.3391459405386	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGGTTTGGAAACTAGT	9080	False	NA	28	True	TATAAA	-20	NA	152018157	152065679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.50	chr4	+	1918	13	NIC	ENSMUSG00000039768.17	novel	823	7	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	237.671736154442	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGGGTTTGGAAACTA	NA	False	NA	26	True	TATAAA	-18	NA	152052303	152065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152052428_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.51	chr4	+	3769	9	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-294	-185	intron_retention	FALSE	canonical	3	755	junction_1	68.8367634335026	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACTTCTGTCCATC	NA	False	NA	15	True	NA	NA	NA	152053908	152066409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152055388_152057936_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.52	chr4	+	158	1	ISM	ENSMUSG00000039768.17	ENSMUST00000128582.8	5607	12	36545	10777	469	-1098	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	152054740	152054898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152054700_152054900
ES.25213.53	chr4	+	4357	5	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	3942	-3	intron_retention	FALSE	canonical	3	763	junction_3	44.9798566027061	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAACAATGGGTTTGGA	141	False	NA	21	True	TATAAA	-13	NA	152058213	152065672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152058303_152058653_152061563_152062455_152062526_152063728_152064505_152065159
ES.25213.55	chr4	+	2014	8	NNC	ENSMUSG00000039768.17	novel	653	4	NA	NA	4169	-191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	306.773731680174	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGAGGCCACTTCTG	368	False	NA	9	True	NA	NA	NA	152058440	152066403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152058537_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ES.25213.7	chr4	+	9035	12	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_6	257.023650710967	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	9094	False	NA	24	True	TATAAA	-16	NA	152018171	152065675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152056235_152056275_152058127_152058216_152061563_152062455_152062526_152063728_152064044_152064374_152064505_152065159
ES.25213.8	chr4	+	826	1	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-14	-22953	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACGTGTATACCTCGCA	9096	False	NA	NA	False	AATAAA	-27	NA	152018173	152018999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152018200_152019000
ES.25213.9	chr4	+	4374	17	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	-13	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	339.925451386036	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGGTTTGGAAACTAG	9097	False	NA	27	True	TATAAA	-19	NA	152018174	152065678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152056235_152056275_152057516_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063649_152063787_152063900_152064044_152064374_152064505_152065159
ES.25214.1	chr4	-	173	1	Intergenic	novelGene_21043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACCATCAGGCT	8978	False	NA	NA	False	NA	NA	NA	152024778	152024605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152024600_152024800
ES.25215.1	chr4	-	176	1	Intergenic	novelGene_21045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152050311	152050135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152050100_152050300
ES.25216.1	chr4	-	1960	1	Antisense	novelGene_ENSMUSG00000039768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTTTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	152054103	152052143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_152052100_152054100
ES.25217.1	chr4	+	1135	1	Intergenic	novelGene_21047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTCCACTGTTCTTT	4582	False	NA	NA	False	AATAAA	-20	NA	152080842	152081977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152080800_152082000
ES.25217.2	chr4	+	2428	2	Intergenic	novelGene_21048	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGCTCTGTTG	4584	False	NA	NA	False	NA	NA	NA	152080844	152083672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152080901_152081300
ES.25218.1	chr4	+	160	1	Intergenic	novelGene_21049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	8079	False	NA	NA	False	NA	NA	NA	152084339	152084499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152084300_152084500
ES.25219.1	chr4	+	3923	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	63	0	63	0	multi-exon	FALSE	canonical	3	100	junction_1	3.39934634239519	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6461	False	NA	13	True	AATAAA	-13	NA	152093322	152102137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
ES.25219.10	chr4	+	3783	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	111	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6509	False	NA	13	True	AATAAA	-13	NA	152093370	152102137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101371_152101462
ES.25219.11	chr4	+	3750	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	111	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6509	False	NA	13	True	AATAAA	-13	NA	152093370	152102137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101563_152101687
ES.25219.13	chr4	+	3780	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	114	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6512	False	NA	12	True	AATAAA	-12	NA	152093373	152102136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101389_152101479
ES.25219.15	chr4	+	3740	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	152	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGGGTGTCATGGCCT	6550	False	NA	11	True	AATAAA	-11	NA	152093411	152102135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101365_152101456
ES.25219.2	chr4	+	3824	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	64	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGGGTGTCATGGCC	6462	False	NA	10	True	AATAAA	-10	NA	152093323	152102134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101405_152101499
ES.25219.3	chr4	+	3782	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	109	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6507	False	NA	13	True	AATAAA	-13	NA	152093368	152102137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101437_152101531
ES.25219.5	chr4	+	3756	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	110	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6508	False	NA	12	True	AATAAA	-12	NA	152093369	152102136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101556_152101674
ES.25219.6	chr4	+	3774	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	110	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATATGCTGGGTGTCAT	6508	False	NA	6	True	AATAAA	-6	NA	152093369	152102130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101431_152101525
ES.25219.8	chr4	+	3787	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	111	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6509	False	NA	12	True	AATAAA	-12	NA	152093370	152102136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101429_152101515
ES.25219.9	chr4	+	3775	5	NNC	ENSMUSG00000073700.4	novel	3986	4	NA	NA	111	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	45.4175076374739	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGGTGTCATGGCCTT	6509	False	NA	12	True	AATAAA	-12	NA	152093370	152102136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791_152101413_152101511
ES.2522.1	chr10	-	6652	1	Genic_Genomic	ENSMUSG00000111542.2	novel	NA	NA	NA	NA	5241	5567	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAATCCTACAGCAACT	NA	False	NA	NA	False	NA	NA	NA	28906208	28899556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_28899600_28906200
ES.25220.1	chr4	-	1038	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	-43	-163	-16	0	multi-exon	FALSE	canonical	3	60	junction_1	59.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	-3	True	AATAAA	-16	NA	152073470	152067095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152067810_152070125_152070319_152073339
ES.25220.12	chr4	-	3316	4	NNC	ENSMUSG00000047777.10	novel	3205	4	NA	NA	882	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.1343297903115	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGCCTCCTTAGGT	NA	False	NA	-4	True	AATAAA	-16	NA	152079833	152074088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152076237_152076526_152077050_152078446_152078549_152079290
ES.25220.13	chr4	-	1553	4	NNC	ENSMUSG00000047777.10	novel	3205	4	NA	NA	71	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.2242156073964	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTGTGCCTCCTTAG	NA	False	NA	-6	True	AATAAA	-14	NA	152080644	152074090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152074692_152076561_152077050_152078446_152078549_152080282
ES.25220.14	chr4	-	2832	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	40	333	40	-333	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACATCTGTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	152080675	152074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
ES.25220.15	chr4	-	1619	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	69	1517	69	-1517	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGCCCTTTTGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	152080646	152075606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
ES.25220.16	chr4	-	3071	9	ISM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	-1	-1	-1	1	intron_retention	FALSE	canonical	3	32	junction_7	9.0958438311132	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTCTGTTCCTTGGT	8678	False	NA	0	True	AATAAA	-19	NA	152112119	152104229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234
ES.25220.17	chr4	-	3527	7	NIC	ENSMUSG00000028952.13	novel	2709	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	16	junction_5	12.1883368658548	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8671	False	NA	-1	True	AATAAA	-18	NA	152112126	152104230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104578_152104646_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234
ES.25220.18	chr4	-	2248	11	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	57	0	intron_retention	FALSE	canonical	1	1	junction_3	18.3128370276154	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8760	False	NA	-1	True	AATAAA	-18	NA	152112037	152104230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104578_152104646_152104736_152105000_152105162_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.19	chr4	-	2325	10	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_7	18.3787316694536	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8674	False	NA	-1	True	AATAAA	-18	NA	152112123	152104230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107298_152110234_152110477_152110844_152111517_152111999
ES.25220.2	chr4	-	1123	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	1	0	1	0	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	-3	True	AATAAA	-16	NA	152073453	152067095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
ES.25220.20	chr4	-	2167	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	17.1816762860904	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTGTCTGTTCCTTG	8696	False	NA	-2	True	AATAAA	-17	NA	152112101	152104231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152104578_152104646_152104736_152105000_152105133_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.21	chr4	-	2282	9	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	27	0	intron_retention	FALSE	canonical	2	3	junction_8	17.244111313721	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCAGTGTCTGTTCCTT	8730	False	NA	-3	True	AATAAA	-16	NA	152112067	152104232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112021
ES.25220.22	chr4	-	2268	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_4	17.4859943955155	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8676	False	NA	-5	True	AATAAA	-14	NA	152112121	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105424_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.23	chr4	-	2564	10	NNC	ENSMUSG00000028952.13	novel	2709	10	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_8	19.5151096889779	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8683	False	NA	-5	True	AATAAA	-14	NA	152112114	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152104578_152104646_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110675_152111517_152111999
ES.25220.24	chr4	-	2163	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	51	4	27	-2	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8730	False	NA	-5	True	AATAAA	-14	NA	152112067	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.25	chr4	-	2820	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	16	junction_7	12.9109007441267	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8671	False	NA	-5	True	AATAAA	-14	NA	152112126	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844
ES.25220.26	chr4	-	2187	11	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	3	-2	intron_retention	FALSE	canonical	1	1	junction_10	16.4745257898369	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8682	False	NA	-5	True	AATAAA	-14	NA	152112115	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152112023
ES.25220.27	chr4	-	3391	6	NIC	ENSMUSG00000028952.13	novel	2312	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	3	junction_5	20.6533290294809	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCAGTGTCTGTTCC	8666	False	NA	-5	True	AATAAA	-14	NA	152112131	152104234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104736_152105000_152106086_152106483_152107265_152110234_152110477_152110844_152111517_152112021
ES.25220.28	chr4	-	2413	10	NIC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	16	junction_6	14.204850501775	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTTCAGTGTCTGTTC	8664	False	NA	-6	True	AATAAA	-13	NA	152112133	152104235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104578_152104646_152104736_152105000_152105373_152105745_152105901_152105998_152106086_152106483_152106692_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.29	chr4	-	1948	1	NIC	ENSMUSG00000028952.13	novel	2312	10	NA	NA	380	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTTCAGTGTCTGTTC	NA	False	NA	-6	True	AATAAA	-13	NA	152106183	152104235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152104200_152106200
ES.25220.3	chr4	-	871	3	NNC	ENSMUSG00000039759.11	novel	1124	4	NA	NA	4891	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	83	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGCTGTCACTCGGT	NA	False	NA	-4	True	AATAAA	-15	NA	152068536	152067096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152067810_152068091_152068194_152068480
ES.25220.4	chr4	-	144	1	Intergenic	novelGene_21046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	152069301	152069157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152069200_152069300
ES.25220.5	chr4	-	843	2	FSM	ENSMUSG00000039759.11	ENSMUST00000146471.2	501	2	8	-350	-2	350	multi-exon	FALSE	canonical	3	179	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGATCATGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	152073429	152069565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152070319_152073339
ES.25220.6	chr4	-	1236	1	NIC	ENSMUSG00000039759.11	novel	1124	4	NA	NA	0	-2286	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCCTCCCTTAATGCAT	NA	False	NA	NA	False	NA	NA	NA	152073437	152072201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152072200_152073400
ES.25220.7	chr4	-	2223	12	NNC	ENSMUSG00000028952.13	novel	2218	11	NA	NA	-5	32029	intron_retention	FALSE	non_canonical	0	0	junction_1	16.8223582038069	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCCTCCCTTAATGCAT	8698	False	NA	NA	False	NA	NA	NA	152112099	152072201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152072226_152104230_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ES.25220.8	chr4	-	3245	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	-23	-17	-23	17	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGTCCTGTGCTGAAAAA	NA	False	NA	12	True	AATAAA	-32	NA	152080738	152074072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
ES.25220.9	chr4	-	3442	3	NIC	ENSMUSG00000047777.10	novel	3205	4	NA	NA	54	1	intron_retention	FALSE	canonical	3	148	junction_2	3	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGTGCCTCCTTAGGT	NA	False	NA	-4	True	AATAAA	-16	NA	152080661	152074088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152077050_152078446_152078549_152080282
ES.25221.1	chr4	-	1154	2	NNC	ENSMUSG00000028950.4	novel	2863	6	NA	NA	7641	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGCTTCTTGGCTG	5413	False	NA	0	True	AATAAA	-14	NA	152115384	152112370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152113455_152115314
ES.25221.2	chr4	-	186	1	Intergenic	novelGene_21050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGGTCACACTTATC	6988	False	NA	NA	False	NA	NA	NA	152113809	152113623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152113600_152113800
ES.25221.3	chr4	-	578	2	Intergenic	novelGene_21051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTAAAAGCTGGTC	6298	False	NA	NA	False	NA	NA	NA	152114499	152113632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152113687_152113975
ES.25222.1	chr4	+	3610	1	Antisense	novelGene_ENSMUSG00000028950.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTTATTAGTATGCAA	62	False	NA	NA	False	NA	NA	NA	152116386	152119996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_152116400_152120000
ES.25223.1	chr4	+	3857	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	-104	-31	-98	13	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCACTACATTTTCCT	7241	False	NA	NA	False	AATACA	-1	NA	152123679	152144512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.10	chr4	+	4367	10	NIC	ENSMUSG00000028948.17	novel	3616	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	620	junction_2	38.1433294331645	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7346	False	NA	NA	False	NA	NA	NA	152123784	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.11	chr4	+	3522	10	NIC	ENSMUSG00000028948.17	novel	3616	11	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	218.674006200221	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7354	False	NA	NA	False	NA	NA	NA	152123792	152144476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.13	chr4	+	2269	12	FSM	ENSMUSG00000028948.17	ENSMUST00000103197.5	2271	12	2	0	2	0	multi-exon	FALSE	canonical	2	5	junction_11	194.972004771526	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTTCCTAGCCGTCTCT	7356	False	NA	NA	False	AATAAA	-17	NA	152123794	152145951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152145709
ES.25223.14	chr4	+	1921	10	NIC	ENSMUSG00000028948.17	novel	2271	12	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	284.944828967917	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTTCCTAGCCGTCTCT	7356	False	NA	NA	False	AATAAA	-17	NA	152123794	152145951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152145709
ES.25223.15	chr4	+	5237	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	11	-1526	2	56	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGTGTACTTCAGTG	7356	False	NA	NA	False	ATTAAA	-14	NA	152123794	152146007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.16	chr4	+	1638	1	NIC	ENSMUSG00000028948.17	novel	2419	6	NA	NA	2	-11254	mono-exon	FALSE	NA	NA	NA	NA	NA	697	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAAAGTCCTTTTGA	7356	False	NA	NA	False	NA	NA	NA	152123794	152125432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152123800_152125400
ES.25223.17	chr4	+	3508	9	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	218.910334098233	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7357	False	NA	NA	False	NA	NA	NA	152123795	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152138334_152144393
ES.25223.19	chr4	+	4169	7	NNC	ENSMUSG00000028948.17	novel	3616	11	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_6	247.857093682809	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7357	False	NA	NA	False	NA	NA	NA	152123795	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152131102_152134991_152135154_152136214_152138333_152144377
ES.25223.20	chr4	+	3671	13	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.509120032325	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7357	False	NA	NA	False	NA	NA	NA	152123795	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152123905_152123961_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.21	chr4	+	7340	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	-24	-3700	3	2248	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAAGG	7357	False	NA	NA	False	NA	NA	NA	152123795	152148199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.22	chr4	+	3618	13	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.509120032325	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7357	False	NA	NA	False	NA	NA	NA	152123795	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152123901_152124010_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.25	chr4	+	4142	11	ISM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	14	-18	5	0	intron_retention	FALSE	canonical	3	617	junction_5	36.0310976796433	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7359	False	NA	NA	False	NA	NA	NA	152123797	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247
ES.25223.26	chr4	+	3598	13	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	5	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	191.509120032325	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7359	False	NA	NA	False	NA	NA	NA	152123797	152144476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152123869_152123973_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.28	chr4	+	4751	9	NIC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	620	junction_2	34.4782540161186	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7360	False	NA	NA	False	NA	NA	NA	152123798	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247
ES.25223.29	chr4	+	3812	12	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.972022836584	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7360	False	NA	NA	False	NA	NA	NA	152123798	152144476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126212_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.3	chr4	+	3435	11	NIC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	206.357069178645	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7331	False	NA	NA	False	NA	NA	NA	152123769	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.31	chr4	+	3975	11	NIC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	617	junction_4	36.9579490772959	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7360	False	NA	NA	False	NA	NA	NA	152123798	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.32	chr4	+	3642	10	NIC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_8	215.516491305634	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7364	False	NA	NA	False	NA	NA	NA	152123802	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152142247_152142382_152142797
ES.25223.33	chr4	+	2886	13	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	191.509120032325	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7364	False	NA	NA	False	NA	NA	NA	152123802	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797_152143356_152144172
ES.25223.35	chr4	+	4266	11	NNC	ENSMUSG00000028948.17	novel	3616	11	NA	NA	11	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	209.12123278137	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7365	False	NA	NA	False	NA	NA	NA	152123803	152144476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124025_152124083_152124265_152125503_152125724_152125973_152126102_152130151_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.36	chr4	+	2769	10	NNC	ENSMUSG00000028948.17	novel	2064	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	211.386837484571	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7365	False	NA	NA	False	NA	NA	NA	152123803	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137150_152143419
ES.25223.37	chr4	+	3694	12	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	196.387077725396	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7367	False	NA	NA	False	NA	NA	NA	152123805	152144481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142803
ES.25223.38	chr4	+	3778	12	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	200.023304427383	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACAGCTCTTCACTAC	7369	False	NA	NA	False	NA	NA	NA	152123807	152144504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152124265_152125503_152125724_152125916_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.39	chr4	+	3808	10	NIC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	406	-5	intron_retention	FALSE	canonical	3	617	junction_4	37.9798517085371	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAGAAAATAATAAC	7787	False	NA	NA	False	NA	NA	NA	152124225	152144476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247
ES.25223.40	chr4	+	2411	5	ISM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	12392	19	12392	-1	3prime_fragment	FALSE	canonical	3	683	junction_3	21.8974884404582	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAAAATAATAACAAAG	7165	False	NA	NA	False	NA	NA	NA	152136211	152144480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.41	chr4	+	2017	3	ISM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	16682	0	16682	0	3prime_fragment	FALSE	canonical	3	683	junction_1	30	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	152140501	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152140683_152142247_152142382_152142797
ES.25223.6	chr4	+	3862	11	NIC	ENSMUSG00000028948.17	novel	3616	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	617	junction_4	41.7712820009154	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7340	False	NA	NA	False	NA	NA	NA	152123778	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.7	chr4	+	3530	13	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.509120032325	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTGTGAATACAGCTC	7340	False	NA	NA	False	NA	NA	NA	152123778	152144496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152123845_152124056_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25223.8	chr4	+	3657	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	-41	0	1	0	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7340	False	NA	NA	False	NA	NA	NA	152123778	152144499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ES.25224.1	chr4	+	166	1	Intergenic	novelGene_21054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	152150650	152150816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152150600_152150800
ES.25225.1	chr4	+	4088	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-243	-27	-243	17	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCTCTCTTCCCTGTTCC	NA	False	NA	55	True	TATAAA	-44	NA	152171071	152199874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.10	chr4	+	4124	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-12	1	intron_retention	FALSE	canonical	2	10	junction_12	32.8123071422904	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAGAGTCATGCGCTT	NA	False	NA	29	True	TATAAA	-18	NA	152171302	152199848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191998_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.12	chr4	+	3715	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-12	115	-12	-115	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAATGAGTCCCTGTCC	NA	False	NA	-87	True	NA	NA	NA	152171302	152199732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.13	chr4	+	4060	23	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.0853792221075	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171302	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152185163_152185394_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.14	chr4	+	4192	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	104	junction_1	15.3931803081754	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171303	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.16	chr4	+	7142	28	Fusion	ENSMUSG00000024793.15_ENSMUSG00000039713.18	novel	3818	22	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	1	junction_24	59.4700417946401	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTTGGTATTTCAG	NA	False	NA	NA	False	ATTAAA	-14	NA	152171303	152204565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286_152201181_152201387_152201523_152201834_152202000_152202096_152202957_152203146_152203185_152203616_152203801_152203967
ES.25225.17	chr4	+	4555	19	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	104	junction_1	15.4236470683457	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTGGAAAGAGTCATGCG	NA	False	NA	26	True	TATAAA	-15	NA	152171306	152199845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.18	chr4	+	4276	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	104	junction_1	14.6574213284602	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171307	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.19	chr4	+	4619	19	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-6	1	intron_retention	FALSE	canonical	3	104	junction_1	15.3459086919037	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCATGCGCTTCTGG	NA	False	NA	33	True	TATAAA	-22	NA	152171308	152199852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.20	chr4	+	4096	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-5	1	intron_retention	FALSE	canonical	3	104	junction_1	15.3022874107109	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCGCTTCTGGAACGCC	NA	False	NA	39	True	TATAAA	-28	NA	152171309	152199858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.22	chr4	+	4017	23	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.1508261989605	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171312	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152181164_152181365_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.24	chr4	+	3807	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.4386092648776	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171312	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172109_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.25	chr4	+	4607	19	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	104	junction_1	15.1246875286568	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTGGAAAGAGTCATGCG	NA	False	NA	26	True	TATAAA	-15	NA	152171312	152199845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.26	chr4	+	3853	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_12	32.3308435818186	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAGAGTCATGCGCTT	NA	False	NA	29	True	TATAAA	-18	NA	152171312	152199848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191998_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.27	chr4	+	4051	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	149	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTACCTGGCCCTGTCCT	NA	False	NA	NA	False	GATAAA	-31	NA	152171312	152200006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.28	chr4	+	2225	18	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-2	2276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	35.5989774745263	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATGTGTATATCTTTT	NA	False	NA	NA	False	TTTAAA	-27	NA	152171312	152194942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152194774
ES.25225.29	chr4	+	4798	19	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	104	junction_1	15.0599624546611	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171313	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.3	chr4	+	4120	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	104	junction_1	15.2396686315681	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCGCTTCTGGAAC	NA	False	NA	36	True	TATAAA	-25	NA	152171296	152199855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.30	chr4	+	7143	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-1	-5	intron_retention	TRUE	non_canonical	0	0	junction_16	34.4317803780171	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171313	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152196437_152196489_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.31	chr4	+	4003	20	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	131	intron_retention	FALSE	non_canonical	0	0	junction_11	35.7565638163915	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGCCTGAAAGCCACT	NA	False	NA	NA	False	GATAAA	-13	NA	152171314	152199988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191465_152192151_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.32	chr4	+	4074	14	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	1834	intron_retention	FALSE	canonical	3	104	junction_1	14.7258979694251	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATGACCCTCAGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	152171314	152194500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152192544_152192637_152192788_152192859_152192998_152193134
ES.25225.33	chr4	+	3766	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.0792061270422	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171314	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190872_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.34	chr4	+	3297	17	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	0	5351	0	1830	5prime_fragment	FALSE	canonical	3	104	junction_1	13.9860421492286	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTCTTATGACCCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	152171314	152194496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134
ES.25225.35	chr4	+	3818	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.1033509900836	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCGCTTCTGGAAC	NA	False	NA	36	True	TATAAA	-25	NA	152171314	152199855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187454_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.37	chr4	+	5838	19	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	5	-3	intron_retention	FALSE	canonical	3	104	junction_1	14.9216058448028	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171319	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.38	chr4	+	2167	17	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	6	2273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.609269338157	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGAATGTGTATATCT	NA	False	NA	NA	False	TTTAAA	-24	NA	152171320	152194939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191016_152191362_152191465_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152194774
ES.25225.39	chr4	+	4337	20	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	6	2	intron_retention	FALSE	canonical	3	104	junction_1	15.3601275387133	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGAGTCATGCGCTTC	NA	False	NA	30	True	TATAAA	-19	NA	152171320	152199849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.4	chr4	+	3911	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-16	1	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCATGCGCTTCTGG	NA	False	NA	33	True	TATAAA	-22	NA	152171298	152199852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.41	chr4	+	4333	20	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	7	-6	intron_retention	FALSE	canonical	3	104	junction_1	15.016888000107	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCGTGGAAAGAGTCA	NA	False	NA	22	True	TATAAA	-11	NA	152171321	152199841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.42	chr4	+	3914	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	8	0	intron_retention	FALSE	canonical	2	10	junction_12	33.0340733183179	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171322	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191998_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.43	chr4	+	4292	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	9	-5	intron_retention	FALSE	canonical	2	10	junction_11	32.9725264424793	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171323	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191998_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.44	chr4	+	7523	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	9	1	intron_retention	FALSE	non_canonical	0	0	junction_16	34.4254266494985	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAGAGTCATGCGCTT	NA	False	NA	29	True	TATAAA	-18	NA	152171323	152199848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152196437_152196489_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.45	chr4	+	4022	20	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	9	-3	intron_retention	FALSE	canonical	0	0	junction_11	35.5432708078898	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171323	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191465_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.46	chr4	+	4023	20	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_10	45.708276464948	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171324	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191365_152191459_152191914_152191998_152192168_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.47	chr4	+	3870	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	32.8429230789813	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCGCTTCTGGAAC	NA	False	NA	36	True	TATAAA	-25	NA	152171324	152199855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171460_152172104_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.48	chr4	+	2763	17	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	10	5875	10	1306	5prime_fragment	FALSE	canonical	3	104	junction_1	13.9860421492286	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGTACACTGACATT	NA	False	NA	NA	False	NA	NA	NA	152171324	152193972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134
ES.25225.49	chr4	+	3752	22	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	34.2019479361978	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171324	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192910_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.5	chr4	+	4164	20	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	104	junction_1	15.4313778977353	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171298	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.50	chr4	+	4309	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	13	-3	intron_retention	FALSE	canonical	1	1	junction_1	33.8007026554183	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171327	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171649_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.51	chr4	+	3751	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	34.9383385409209	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	NA	False	NA	25	True	TATAAA	-14	NA	152171327	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.53	chr4	+	4086	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	30	-5	intron_retention	FALSE	canonical	1	4	junction_19	43.6852377812002	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171344	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172104_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198404_152199026_152199286
ES.25225.54	chr4	+	4509	20	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	30	0	intron_retention	FALSE	canonical	3	104	junction_1	14.7522475868684	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	NA	False	NA	32	True	TATAAA	-21	NA	152171344	152199851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.55	chr4	+	4263	20	NIC	ENSMUSG00000039713.18	novel	3842	21	NA	NA	30	-5	intron_retention	FALSE	canonical	1	7	junction_1	33.4779044012987	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	2957	False	NA	23	True	TATAAA	-12	NA	152181205	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152181365_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.56	chr4	+	3816	21	NNC	ENSMUSG00000039713.18	novel	2792	7	NA	NA	477	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2496715312717	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	3404	False	NA	28	True	TATAAA	-17	NA	152181652	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152181816_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.57	chr4	+	3659	20	ISM	ENSMUSG00000039713.18	ENSMUST00000105661.10	3842	21	5323	-4	-2458	0	3prime_fragment	FALSE	canonical	3	121	junction_7	12.5775158841949	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTCATGCGCTTCTG	306	False	NA	32	True	TATAAA	-21	NA	152186498	152199851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.58	chr4	+	3983	14	NIC	ENSMUSG00000039713.18	novel	3842	21	NA	NA	-292	-3	intron_retention	FALSE	canonical	3	121	junction_2	12.9665021310604	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTGGAAAGAGTCATGC	2472	False	NA	25	True	TATAAA	-14	NA	152188664	152199844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.59	chr4	+	2767	13	ISM	ENSMUSG00000039713.18	ENSMUST00000105661.10	3842	21	9649	5	-1268	-5	3prime_fragment	FALSE	canonical	3	124	junction_2	11.8283440185946	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	307	False	NA	23	True	TATAAA	-12	NA	152190824	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.6	chr4	+	4098	21	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	-16	-3	-16	-1	intron_retention	FALSE	canonical	3	104	junction_1	15.0860863049367	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCATGCGCTTCT	NA	False	NA	31	True	TATAAA	-20	NA	152171298	152199850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ES.25225.60	chr4	+	4501	6	NNC	ENSMUSG00000039713.18	novel	3933	22	NA	NA	1441	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.2034119971016	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCATGCGCTTCT	3109	False	NA	31	True	TATAAA	-20	NA	152193626	152199850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152196437_152196489_152196698_152196779_152196896_152196975_152197158_152198404_152199026_152199286
ES.25225.61	chr4	+	2720	6	NIC	ENSMUSG00000024793.15	novel	1661	10	NA	NA	-1	-10	intron_retention	FALSE	canonical	0	0	junction_2	3.84707681233427	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGCAGCTGCTTGGT	837	False	NA	NA	False	ATTAAA	-7	NA	152200854	152204558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152202000_152202096_152202760_152202857_152202957_152203146_152203185_152203616_152203801_152203967
ES.25225.62	chr4	+	1192	2	ISM	ENSMUSG00000024793.15	ENSMUST00000035275.8	1603	7	2398	12	770	-12	3prime_fragment	FALSE	canonical	3	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAAGCAGCTGCTTG	3180	False	NA	NA	False	ATTAAA	-5	NA	152203197	152204556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152203801_152203967
ES.25225.8	chr4	+	4165	20	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-13	0	intron_retention	FALSE	canonical	3	104	junction_1	15.6591109655908	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171301	152199847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25225.9	chr4	+	3798	21	NNC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.1001898043815	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	False	NA	23	True	TATAAA	-12	NA	152171302	152199842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152192168_152192319_152192408_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ES.25226.1	chr4	+	160	1	Intergenic	novelGene_21055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	4849	False	NA	NA	False	NA	NA	NA	152222099	152222259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152222100_152222300
ES.25227.1	chr4	+	172	1	Intergenic	novelGene_21056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGATGGCT	2890	False	NA	NA	False	NA	NA	NA	152227252	152227424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152227300_152227400
ES.25228.1	chr4	+	161	1	Intergenic	novelGene_21058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152237169	152237330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152237200_152237300
ES.25229.1	chr4	+	177	1	Intergenic	novelGene_21060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	152241187	152241364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152241200_152241400
ES.2523.1	chr10	-	176	1	Intergenic	novelGene_1919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACACTC	NA	False	NA	NA	False	NA	NA	NA	28919016	28918840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_28918800_28919000
ES.25230.1	chr4	+	2906	5	NNC	ENSMUSG00000028940.3	novel	2521	5	NA	NA	7	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.707106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTACTTTGGTCTGTT	1312	False	NA	NA	False	NA	NA	NA	152243330	152246924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152243781_152244061_152244171_152244261_152244358_152244585_152244686_152244773
ES.25231.1	chr4	+	179	1	Intergenic	novelGene_21061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	152252178	152252357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152252200_152252400
ES.25232.1	chr4	+	1771	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	-312	-2	-312	-1	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGGTGGTCATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	152262278	152356311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.10	chr4	+	1395	9	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	-161	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	162.251300071833	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGAAGCCTAGGTGGTC	NA	False	NA	13	True	AATAAA	-18	NA	152270060	152356305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152270210_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.11	chr4	+	1379	9	NIC	ENSMUSG00000028937.15	novel	311	3	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	162.572099389778	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCTAGGTGGTCATT	NA	False	NA	16	True	AATAAA	-21	NA	152270223	152356308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152270354_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.12	chr4	+	1626	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	-127	6	-127	2	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAAGCCTAGGTGGTCA	NA	False	NA	14	True	AATAAA	-19	NA	152270463	152356306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.15	chr4	+	1298	9	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	1039	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	162.251300071833	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGAAGCCTAGGTGG	NA	False	NA	11	True	AATAAA	-16	NA	152271701	152356303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152271756_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.16	chr4	+	1310	9	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	3867	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.572099389778	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGAAGCCTAGGTGG	318	False	NA	11	True	AATAAA	-16	NA	152274529	152356303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152274596_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.17	chr4	+	1478	10	NNC	ENSMUSG00000028937.15	novel	1393	9	NA	NA	4243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.712360908324	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	694	False	NA	12	True	AATAAA	-17	NA	152274905	152356304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152275025_152284300_152284415_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.18	chr4	+	3664	2	Genic_Genomic	ENSMUSG00000028937.15	novel	1457	9	NA	NA	2504	-9943	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAAAAAAGAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	152286828	152292310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_152287872_152289689
ES.25232.2	chr4	+	1287	8	NIC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	85	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	168.490295245265	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTAGGTGGTCATTTGT	NA	False	NA	19	True	AATAAA	-24	NA	152262675	152356311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152337605_152337723_152345302_152345488_152355930
ES.25232.3	chr4	+	1387	9	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.605422816605	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTAGGTGGTCATTT	NA	False	NA	17	True	AATAAA	-22	NA	152262675	152356309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314216_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.4	chr4	+	1262	8	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	161.236041952442	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	False	NA	12	True	AATAAA	-17	NA	152262676	152356304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152262798_152291220_152291339_152302192_152302350_152314243_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ES.25232.5	chr4	+	876	6	ISM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	86	33900	86	20076	5prime_fragment	FALSE	canonical	3	360	junction_1	51.0505631702531	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATTACTGAAATACCA	NA	False	NA	NA	False	TATAAA	-24	NA	152262676	152322409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136
ES.25232.8	chr4	+	1340	9	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	97	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	160.766085898115	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCCATGAAGCCTAGGT	NA	False	NA	9	True	AATAAA	-14	NA	152262687	152356301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345480_152355934
ES.25232.9	chr4	+	173	1	Intergenic	novelGene_21062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAACTATGCGTGAG	NA	False	NA	NA	False	NA	NA	NA	152269369	152269542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152269400_152269500
ES.25233.1	chr4	-	207	2	Intergenic	novelGene_21052	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAACAGGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	152293091	152120047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152120080_152292916
ES.25233.10	chr4	-	2535	10	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	4.36597393430856	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGTTGAGATTCTGCA	NA	False	NA	-2	True	NA	NA	NA	152236848	152212250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152212790_152212864_152213011_152215225_152215419_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ES.25233.11	chr4	-	3429	4	NIC	ENSMUSG00000028943.19	novel	1190	5	NA	NA	-15	0	intron_retention	FALSE	canonical	2	5	junction_3	4.78423336480244	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGTTGAGATTCTGCA	NA	False	NA	-2	True	NA	NA	NA	152216338	152212250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152212790_152212864_152215419_152215508_152215752_152216245
ES.25233.12	chr4	-	1458	3	NIC	ENSMUSG00000028943.19	novel	4618	12	NA	NA	-50	-6777	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	152236878	152219375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152220132_152233315_152233510_152236370
ES.25233.13	chr4	-	176	1	Intergenic	novelGene_21057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTTTGACCATAGCCT	NA	False	NA	NA	False	NA	NA	NA	152228883	152228707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152228700_152228900
ES.25233.14	chr4	-	842	2	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	-155	24396	-6	-20533	5prime_fragment	FALSE	canonical	3	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATATTTTCCTTTTC	NA	False	NA	NA	False	AGTAAA	-23	NA	152236834	152233131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_152233510_152236370
ES.25233.15	chr4	-	198	1	Intergenic	novelGene_21059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGACTGTGAAATGGC	NA	False	NA	NA	False	NA	NA	NA	152239773	152239575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152239600_152239800
ES.25233.16	chr4	-	5611	2	Antisense	novelGene_ENSMUSG00000028937.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGGATTCTGGGATAC	8696	False	NA	NA	False	NA	NA	NA	152282971	152272793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_152276223_152280789
ES.25233.17	chr4	-	2315	1	Intergenic	novelGene_21063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAAACCCTCTGGAA	8695	False	NA	NA	False	NA	NA	NA	152282972	152280657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152280700_152283000
ES.25233.18	chr4	-	178	1	Intergenic	novelGene_21064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCATTC	NA	False	NA	NA	False	NA	NA	NA	152293093	152292915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152292900_152293100
ES.25233.2	chr4	-	203	1	Intergenic	novelGene_21053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTAGTCCTGGCTGTC	9898	False	NA	NA	False	AATAAA	-20	NA	152120999	152120796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152120800_152121000
ES.25233.3	chr4	-	3542	13	NNC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-21	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.46198986939131	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCACTCTCACTCGCCG	NA	False	NA	NA	False	ATTAAA	-24	NA	152236849	152204777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ES.25233.5	chr4	-	3283	12	NNC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.69616370829838	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGCTCTCATTCACT	NA	False	NA	NA	False	ATTAAA	-13	NA	152236844	152204788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ES.25233.6	chr4	-	3558	14	NNC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.12102060833638	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGCTCTCATTCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	152236844	152204789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152217380_152217414_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ES.25233.7	chr4	-	1966	7	NNC	ENSMUSG00000028943.19	novel	1411	8	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.66874967458085	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGCTCTCATTCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	152216339	152204789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152213011_152215225_152215419_152215508_152215752_152216245
ES.25233.8	chr4	-	4116	6	NNC	ENSMUSG00000028943.19	novel	1411	8	NA	NA	24	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	7.05974503788912	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGGCTCTCATTCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	152216274	152204789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_152205723_152208157_152208251_152212525_152212790_152212864_152215419_152215508_152215752_152216245
ES.25233.9	chr4	-	5053	11	NIC	ENSMUSG00000028943.19	novel	3406	16	NA	NA	-45	2	intron_retention	FALSE	canonical	2	4	junction_3	3.3166247903554	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGAGATTCTGCATT	NA	False	NA	0	True	NA	NA	NA	152236873	152212248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152212790_152212864_152215419_152215508_152215752_152217380_152217414_152218617_152218899_152219929_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ES.25234.1	chr4	+	4031	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105651.8	3777	6	-255	1	-125	0	multi-exon	TRUE	canonical	0	0	junction_3	1.85472369909914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCTTCTGAGGCTGG	4966	False	NA	NA	False	AATAAA	-19	NA	152358563	152369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367314
ES.25234.2	chr4	+	1251	3	ISM	ENSMUSG00000042804.14	ENSMUST00000105650.8	3838	6	-104	4965	-104	-4964	5prime_fragment	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAGCACTCCCATTTT	4987	False	NA	NA	False	GATAAA	-17	NA	152358584	152364829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152358840_152363469_152363938_152364301
ES.25234.3	chr4	+	3930	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105650.8	3838	6	-93	1	-93	0	multi-exon	FALSE	canonical	0	0	junction_3	1.74355957741627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCTTCTGAGGCTGG	4998	False	NA	NA	False	AATAAA	-19	NA	152358595	152369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367383
ES.25234.4	chr4	+	2720	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105651.8	3777	6	-189	1246	-59	-1245	multi-exon	FALSE	canonical	0	0	junction_3	1.85472369909914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTATCTCTAAGAGTGAAT	5032	False	NA	NA	False	NA	NA	NA	152358629	152368548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367314
ES.25234.5	chr4	+	2666	1	NIC	ENSMUSG00000042804.14	novel	3838	6	NA	NA	299	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACATCCTTCTGAGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	152367125	152369791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152367100_152369800
ES.25235.1	chr4	+	4942	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	-16	-7	-16	7	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGTATCAGGTGTCCT	4519	False	NA	10	True	AATAAA	-25	NA	152381667	152391585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ES.25235.10	chr4	+	2794	7	Fusion	ENSMUSG00000028936.16_ENSMUSG00000039662.17	novel	4950	6	NA	NA	-19	11	multi-exon	FALSE	canonical	1	30	junction_4	2642.04229190644	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTTTTTCTTCTCA	4593	False	NA	40	True	ATTAAA	-30	NA	152381741	152418539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152411937_152412043_152414460_152414586_152416736
ES.25235.13	chr4	+	5018	7	NNC	ENSMUSG00000039662.17	novel	4950	6	NA	NA	30	-3	intron_retention	FALSE	canonical	0	0	junction_5	55.5507775723157	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATGAGGAGTCCTGTA	4642	False	NA	-1	True	AATAAA	-14	NA	152381790	152391574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152386091_152386193_152387478
ES.25235.14	chr4	+	4755	1	Genic_Genomic	ENSMUSG00000039662.17	novel	NA	NA	NA	NA	-3016	4	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCCTGTATCAGGTGT	9679	False	NA	7	True	AATAAA	-22	NA	152386827	152391582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_152386800_152391600
ES.25235.15	chr4	+	2408	4	NIC	ENSMUSG00000028936.16	novel	581	4	NA	NA	-356	3	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	2643.56039377873	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTATCCTTGCATCTC	NA	False	NA	19	True	AATAAA	-18	NA	152409842	152416940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152411817_152411937_152412043_152414460_152414586_152416736
ES.25235.16	chr4	+	643	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	-49	-13	-49	9	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTGCATCTCTGCAGT	NA	False	NA	25	True	AATAAA	-24	NA	152410149	152416946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ES.25235.17	chr4	+	3693	3	NIC	ENSMUSG00000028936.16	novel	2051	4	NA	NA	-32	11	intron_retention	FALSE	canonical	3	5596	junction_2	103	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTTTTTCTTCTCA	NA	False	NA	40	True	ATTAAA	-30	NA	152410277	152418539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152412043_152414460_152414586_152416736
ES.25235.18	chr4	+	553	5	NNC	ENSMUSG00000028936.16	novel	581	4	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2501.17717285281	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152410278	152416930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152410353_152411937_152412043_152413716_152413772_152414460_152414586_152416736
ES.25235.19	chr4	+	2093	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	-37	-5	-23	5	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCAAGGCTTTTTTTC	NA	False	NA	34	True	ATTAAA	-24	NA	152410286	152418533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ES.25235.2	chr4	+	4846	4	NIC	ENSMUSG00000039662.17	novel	4919	5	NA	NA	-11	5	intron_retention	FALSE	canonical	1	2	junction_1	59.2021020647822	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCCTGTATCAGGTGTC	4524	False	NA	8	True	AATAAA	-23	NA	152381672	152391583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152382026_152384127_152384298_152384993_152385212_152387478
ES.25235.20	chr4	+	1038	4	NNC	ENSMUSG00000028936.16	novel	581	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2383.03088990097	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152410286	152416930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152410353_152411937_152412043_152413912_152414586_152416736
ES.25235.21	chr4	+	4233	2	FSM	ENSMUSG00000028936.16	ENSMUST00000127659.2	732	2	-1296	-2205	-23	0	multi-exon	FALSE	canonical	3	5802	junction_1	0	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410286	152416937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152412043_152414460
ES.25235.22	chr4	+	654	5	NNC	ENSMUSG00000028936.16	novel	581	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2570.78417024845	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152410308	152416930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152410353_152411937_152412043_152414460_152414586_152414916_152415103_152416736
ES.25235.24	chr4	+	2884	3	NIC	ENSMUSG00000028936.16	novel	474	4	NA	NA	-6	0	intron_retention	FALSE	canonical	3	4243	junction_1	676.5	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410317	152416937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152410353_152411937_152414586_152416736
ES.25235.25	chr4	+	614	5	NIC	ENSMUSG00000028936.16	novel	581	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	2499.4547780466	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCGGTGGTTTATCC	NA	False	NA	10	True	AATAAA	-9	NA	152410317	152416931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152410353_152411937_152412043_152413716_152413871_152414460_152414586_152416736
ES.25235.27	chr4	+	2603	4	NNC	ENSMUSG00000028936.16	novel	2051	4	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2637.50842020773	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTCACTGTGCAAGG	NA	False	NA	25	True	ATTAAA	-15	NA	152410319	152418524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152410357_152411937_152412043_152413912_152414586_152416736
ES.25235.29	chr4	+	2026	3	NIC	ENSMUSG00000028936.16	novel	581	4	NA	NA	10	0	intron_retention	FALSE	canonical	3	5596	junction_2	103	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152410335	152416930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152412043_152414460_152414586_152416736
ES.25235.3	chr4	+	1579	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	-11	3351	-11	3016	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACTCTGAGCCTCCAT	4524	False	NA	NA	False	TATAAA	-19	NA	152381672	152388227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ES.25235.30	chr4	+	6591	1	NIC	ENSMUSG00000028936.16	novel	474	4	NA	NA	18	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGGTGGTTTATCCTTG	NA	False	NA	13	True	AATAAA	-12	NA	152410343	152416934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152410300_152416900
ES.25235.31	chr4	+	3420	4	NIC	ENSMUSG00000028936.16	novel	441	3	NA	NA	31	-61	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	2643.56039377873	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCTTGTATTTGAATGA	NA	False	NA	-33	True	AATAAA	-30	NA	152410356	152418466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152411817_152411937_152412043_152414460_152414586_152416736
ES.25235.32	chr4	+	4648	2	FSM	ENSMUSG00000028936.16	ENSMUST00000127659.2	732	2	-120	-3796	-61	0	multi-exon	FALSE	canonical	3	5802	junction_1	0	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	False	NA	29	True	ATTAAA	-19	NA	152411462	152418528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152412043_152414460
ES.25235.33	chr4	+	5026	2	NNC	ENSMUSG00000028936.16	novel	369	3	NA	NA	158	0	intron_retention	FALSE	canonical	0	0	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCGGTGGTTTATCC	NA	False	NA	10	True	AATAAA	-9	NA	152411740	152416931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152413090_152413254
ES.25235.4	chr4	+	4838	6	NNC	ENSMUSG00000039662.17	novel	4919	5	NA	NA	36	0	intron_retention	FALSE	non_canonical	0	0	junction_5	50.9603767646983	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	4571	False	NA	3	True	AATAAA	-18	NA	152381719	152391578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478_152388465_152388509
ES.25235.5	chr4	+	4991	6	FSM	ENSMUSG00000039662.17	ENSMUST00000151372.8	4950	6	-32	-9	-32	8	multi-exon	FALSE	canonical	3	25	junction_2	50.2274825170444	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTATCAGGTGTCCTG	4580	False	NA	11	True	AATAAA	-26	NA	152381728	152391586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152387478
ES.25235.6	chr4	+	4853	5	NNC	ENSMUSG00000039662.17	novel	4919	5	NA	NA	-21	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	53.260562332743	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGAGGAGTCCTGTATC	4591	False	NA	1	True	AATAAA	-16	NA	152381739	152391576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387486
ES.25235.7	chr4	+	3497	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	56	1366	-21	-1313	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCAGCTCGCAAGTAA	4591	False	NA	NA	False	AAAACA	-1	NA	152381739	152390212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ES.25235.8	chr4	+	4760	6	NNC	ENSMUSG00000039662.17	novel	4950	6	NA	NA	-20	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	50.9603767646983	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGAGGAGTCCTGTATC	4592	False	NA	1	True	AATAAA	-16	NA	152381740	152391576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385076_152385175_152385212_152387478
ES.25236.1	chr4	-	4530	3	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-152	1	intron_retention	FALSE	canonical	0	0	junction_2	14	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTACAGTGATCACTC	NA	False	NA	NA	False	AATAAA	-19	NA	152398012	152391474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152397034_152397820
ES.25236.10	chr4	-	3082	13	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	10	-5	intron_retention	FALSE	canonical	0	0	junction_7	8.6421930087218	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAGTACAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152400412	152391480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152398492_152399546_152399848_152399975_152400059_152400136_152400207_152400290_152400375
ES.25236.11	chr4	-	2092	13	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-6	-5	intron_retention	FALSE	canonical	0	0	junction_7	8.6421930087218	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAGTACAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152400428	152391480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152399498_152399546_152399848_152399975_152400059_152400136_152400207_152400290_152400375
ES.25236.12	chr4	-	1560	7	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-155	82	intron_retention	FALSE	canonical	3	8	junction_6	5.99305153212173	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGAAATTACTTCATT	NA	False	NA	NA	False	NA	NA	NA	152398015	152391685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820
ES.25236.2	chr4	-	2641	12	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	345	1	intron_retention	TRUE	canonical	0	0	junction_8	8.12708968677346	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTACAGTGATCACTC	NA	False	NA	NA	False	AATAAA	-19	NA	152400077	152391474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152398492_152399546_152399848_152399975_152400059
ES.25236.3	chr4	-	2628	5	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-155	1	intron_retention	FALSE	canonical	3	8	junction_4	7.1239034243875	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTACAGTGATCACTC	NA	False	NA	NA	False	AATAAA	-19	NA	152398015	152391474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152396714_152396846_152397742_152397820
ES.25236.4	chr4	-	4470	3	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	25	-4	intron_retention	FALSE	canonical	3	14	junction_2	7	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAGTACAGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	152397780	152391479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152397034_152397643
ES.25236.6	chr4	-	1528	6	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	22	-4	intron_retention	FALSE	canonical	3	14	junction_5	5.23832034148352	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAGTACAGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	152397835	152391479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152397034_152397643
ES.25236.7	chr4	-	1906	5	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	14	junction_4	5.3851648071345	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAGTACAGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	152397829	152391479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152396714_152396846_152397034_152397643
ES.25236.8	chr4	-	1437	7	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	-148	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.64098759787715	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAGTACAGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	152398008	152391479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152395959_152396527_152396714_152396846_152397034_152397643_152397742_152397820
ES.25236.9	chr4	-	1974	4	NIC	ENSMUSG00000058498.13	novel	2466	17	NA	NA	40	-5	intron_retention	FALSE	canonical	3	14	junction_3	6.18241233033047	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAGTACAGTGA	NA	False	NA	NA	False	AATAAA	-13	NA	152397765	152391480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152392074_152393294_152393361_152395840_152397034_152397643
ES.25237.1	chr4	-	202	1	Intergenic	novelGene_21065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	152404046	152403844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152403800_152404000
ES.25238.1	chr4	-	3637	1	Antisense	novelGene_ENSMUSG00000028936.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAAGGCTGCGG	392	False	NA	NA	False	NA	NA	NA	152418412	152414775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_152414800_152418400
ES.25239.1	chr4	+	9321	42	FSM	ENSMUSG00000005045.17	ENSMUST00000030775.12	9486	42	158	7	-78	6	multi-exon	TRUE	canonical	0	0	junction_1	3.33816821676597	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTAGTTCTTAGCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152423265	152474644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152423488_152432392_152432521_152437997_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.10	chr4	+	7939	32	NIC	ENSMUSG00000005045.17	novel	9375	41	NA	NA	-11257	-1	intron_retention	FALSE	canonical	0	0	junction_15	3.15173011305142	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCGCTGTAGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	152445341	152474637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470460_152471371
ES.25239.11	chr4	+	4941	33	NNC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	-11257	-2955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	3.57385799067338	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTGGATGACGTGT	NA	False	NA	NA	False	NA	NA	NA	152445341	152471683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462257_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152471371
ES.25239.12	chr4	+	6451	25	NNC	ENSMUSG00000005045.17	novel	9375	41	NA	NA	-1375	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.71347957521723	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCGCTGTAGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	152455223	152474638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461425_152461599_152462072_152462257_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.13	chr4	+	5980	22	ISM	ENSMUSG00000005045.17	ENSMUST00000005175.5	9122	41	34624	-6	1369	6	3prime_fragment	FALSE	canonical	0	0	junction_20	3.53857908631606	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTGTAGTTCTTAGCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152457967	152474644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470405_152470460_152471371
ES.25239.14	chr4	+	5150	15	NIC	ENSMUSG00000005045.17	novel	9375	41	NA	NA	6101	0	intron_retention	FALSE	canonical	2	4	junction_13	3.13065814297302	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCGCTGTAGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	152462699	152474638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470296_152470405_152470460_152471371
ES.25239.15	chr4	+	4260	9	ISM	ENSMUSG00000005045.17	ENSMUST00000030775.12	9486	42	43682	9	10191	4	3prime_fragment	FALSE	canonical	2	4	junction_7	3.93700393700591	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGCTGTAGTTCTTAGCC	NA	False	NA	NA	False	AATAAA	-19	NA	152466789	152474642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.16	chr4	+	3996	3	NIC	ENSMUSG00000005045.17	novel	6245	24	NA	NA	12381	1	intron_retention	FALSE	canonical	3	9	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATCGCTGTAGTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	152468979	152474639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152469138_152469889_152470460_152471371
ES.25239.17	chr4	+	4586	2	NIC	ENSMUSG00000005045.17	novel	6245	24	NA	NA	12542	0	intron_retention	FALSE	canonical	3	9	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCGCTGTAGTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	152469140	152474638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152470460_152471371
ES.25239.2	chr4	+	6498	40	NNC	ENSMUSG00000005045.17	novel	6245	24	NA	NA	3791	-2933	intron_retention	FALSE	canonical	0	0	junction_26	3.50935633044628	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCAGATTCACGACAC	NA	False	NA	NA	False	GATAAA	-19	NA	152429842	152471705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152429935_152432392_152432521_152437997_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462257_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470460_152471371
ES.25239.3	chr4	+	6083	41	NNC	ENSMUSG00000005045.17	novel	6245	24	NA	NA	3829	-2949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	3.46689702760264	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGATGACGTGTGGAAGA	NA	False	NA	NA	False	GATAAA	-3	NA	152429880	152471689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152429935_152432392_152432521_152437997_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470405_152470460_152471371
ES.25239.4	chr4	+	6066	41	NNC	ENSMUSG00000005045.17	novel	6245	24	NA	NA	8490	-2931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.29545141065682	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGATTCACGACACTC	NA	False	NA	NA	False	GATAAA	-21	NA	152434541	152471707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152434574_152437997_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.5	chr4	+	5983	39	NIC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	11943	-2931	combination_of_known_splicesites	FALSE	canonical	1	1	junction_38	3.25891064850794	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGATTCACGACACTC	NA	False	NA	NA	False	GATAAA	-21	NA	152437994	152471707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152471371
ES.25239.6	chr4	+	5930	40	NNC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	12066	-2924	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	3.33491086931059	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACGACACTCCTGTCTG	NA	False	NA	NA	False	GATAAA	-28	NA	152438117	152471714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152438187_152440537_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462257_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.7	chr4	+	7243	37	NNC	ENSMUSG00000005045.17	novel	9486	42	NA	NA	14523	-2937	intron_retention	TRUE	canonical	0	0	junction_26	3.24275069944722	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGATTCAGATTCACG	NA	False	NA	NA	False	GATAAA	-15	NA	152440574	152471701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462248_152462634_152462728_152462914_152463004_152463186_152463768_152463807_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152470054_152470180_152470296_152470405_152470460_152471371
ES.25239.8	chr4	+	5700	38	NNC	ENSMUSG00000005045.17	novel	9122	41	NA	NA	14525	-2931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	3.51663063390793	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGATTCACGACACTC	NA	False	NA	NA	False	GATAAA	-21	NA	152440576	152471707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152440657_152441076_152441316_152442954_152443077_152444144_152444269_152445020_152445188_152445277_152445500_152447341_152447549_152447731_152447944_152450583_152450716_152450817_152450927_152451738_152451931_152452285_152452487_152454961_152455100_152455184_152455307_152456034_152456209_152456540_152456683_152457902_152458035_152458788_152458907_152459533_152459659_152460592_152460825_152461036_152461148_152461425_152461599_152462072_152462257_152462634_152462728_152462914_152463004_152463186_152463321_152463821_152463967_152464276_152464437_152464904_152464985_152465603_152465737_152466791_152466870_152467348_152467487_152467726_152467836_152468580_152468714_152468941_152469138_152469889_152470054_152470405_152470460_152471371
ES.2524.1	chr10	+	4299	7	FSM	ENSMUSG00000038916.8	ENSMUST00000092629.4	4105	7	-156	-38	-156	38	multi-exon	FALSE	canonical	0	0	junction_1	2.91070819942883	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTCTGTCTCCAGAGA	NA	False	NA	NA	False	AGTAAA	-17	NA	29019678	29075664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_29020432_29022559_29023750_29024180_29024406_29026239_29026399_29056957_29057030_29072260_29073437_29074940
ES.2524.2	chr10	+	5530	12	Fusion	ENSMUSG00000038916.8_ENSMUSG00000004360.10	novel	4105	7	NA	NA	-623	-368	multi-exon	FALSE	canonical	0	0	junction_8	2.46630181204555	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTCTTTGTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	29022707	29103803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_29023750_29024180_29024406_29026239_29026399_29056957_29057030_29072260_29073437_29074940_29075277_29094050_29094293_29097781_29098127_29098216_29098297_29099329_29099402_29100230_29101411_29103202
ES.2524.4	chr10	+	2145	1	Intergenic	novelGene_1920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAACATGAAATTATGG	NA	False	NA	NA	False	NA	NA	NA	29084788	29086933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_29084800_29086900
ES.25240.1	chr4	+	156	1	Intergenic	novelGene_21066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	4023	False	NA	NA	False	NA	NA	NA	152482202	152482358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_152482200_152482400
ES.25241.1	chr4	-	3555	15	FSM	ENSMUSG00000028931.13	ENSMUST00000030768.10	3597	15	42	0	-3	0	multi-exon	FALSE	canonical	1	4	junction_13	3.43748840443313	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCTGATCTCTCCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	152562004	152475201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152561857
ES.25241.2	chr4	-	5720	14	NIC	ENSMUSG00000028931.13	novel	3961	16	NA	NA	3574	0	intron_retention	TRUE	canonical	1	1	junction_13	4.3582201459124	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCTGATCTCTCCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	152558322	152475201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_152478288_152478746_152478868_152479385_152479481_152479581_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152558179
ES.25241.3	chr4	-	3596	16	FSM	ENSMUSG00000028931.13	ENSMUST00000160884.9	3961	16	364	1	-2	0	multi-exon	FALSE	canonical	1	3	junction_13	3.63684845252956	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCTGATCTCTCCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	152562003	152475201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152561857
ES.25241.4	chr4	-	1431	16	FSM	ENSMUSG00000028931.13	ENSMUST00000105648.10	1799	16	14	354	-2	122	multi-exon	FALSE	canonical	1	3	junction_13	3.92371705854991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAAGGGAAATCACTAT	NA	False	NA	NA	False	NA	NA	NA	152533299	152477385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152533134
ES.25241.5	chr4	-	1293	16	FSM	ENSMUSG00000028931.13	ENSMUST00000105648.10	1799	16	23	483	7	-7	multi-exon	FALSE	canonical	1	3	junction_13	3.92371705854991	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAGGACTATAGATCC	NA	False	NA	NA	False	AATAAA	-8	NA	152533290	152477514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152533134
ES.25242.10	chr4	+	4325	26	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-415	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.81835016690686	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTATACTGGGATTC	NA	False	NA	NA	False	AATATA	-17	NA	152562183	152647568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.12	chr4	+	3080	17	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-409	21542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.0349426151519	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTCCTCCTTTTGTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	152562189	152624256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622665_152623279_152623468_152623545
ES.25242.13	chr4	+	1454	9	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-403	9347	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	5.42563360355268	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCCATGGCCTCTTTCT	NA	False	NA	NA	False	TTTAAA	-17	NA	152562195	152592045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813
ES.25242.14	chr4	+	4728	29	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-398	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	9.64755176726411	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTCTTCTGATGTTT	NA	False	NA	NA	False	AATGAA	-18	NA	152562200	152647639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152646034_152646211_152646462_152646607_152647094
ES.25242.15	chr4	+	4766	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-359	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	8.66361725675035	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTATGTTTTTCTTA	NA	False	NA	NA	False	TATAAA	-13	NA	152562239	152647504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583581_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.16	chr4	+	4603	29	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-357	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.3935360971342	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTTTCTTACTATAT	NA	False	NA	NA	False	TATAAA	-19	NA	152562241	152647510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.17	chr4	+	4648	28	NNC	ENSMUSG00000039577.18	novel	5027	30	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6351720692447	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTCTTCTGATGTTT	NA	False	NA	NA	False	AATGAA	-18	NA	152562603	152647639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562897_152568659_152568725_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152646462_152646607_152647094
ES.25242.18	chr4	+	5019	30	FSM	ENSMUSG00000039577.18	ENSMUST00000081393.10	5027	30	7	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_1	9.48470199522204	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTCTTCTGATGTTT	NA	False	NA	NA	False	AATGAA	-18	NA	152562605	152647639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_152562897_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.19	chr4	+	3252	20	NNC	ENSMUSG00000039577.18	novel	4465	29	NA	NA	27191	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.8023543541143	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCATGTATTTTATTAT	NA	False	NA	NA	False	AATATA	-7	NA	152614561	152647558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152614649_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646034_152646211_152646462_152646607_152647094
ES.25242.2	chr4	+	4939	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-432	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_14	7.38929392329869	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152562166	152647640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.20	chr4	+	5627	19	NNC	ENSMUSG00000039577.18	novel	5027	30	NA	NA	34268	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.0645359184868	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152621638	152647640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636872_152636979_152638899_152638945_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.21	chr4	+	3166	1	NIC	ENSMUSG00000039577.18	novel	4465	29	NA	NA	47485	-9483	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152634855	152638021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152634900_152638000
ES.25242.22	chr4	+	885	2	ISM	ENSMUSG00000039577.18	ENSMUST00000056567.6	4583	29	77385	-80	58841	-56	3prime_fragment	FALSE	canonical	3	33	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTGTATCTTTTTTT	NA	False	NA	NA	False	AATATA	-33	NA	152646211	152647584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_152646607_152647094
ES.25242.23	chr4	+	1046	1	NIC	ENSMUSG00000039577.18	novel	5027	30	NA	NA	59222	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTCTCTTCTGATGTT	NA	False	NA	NA	False	AATGAA	-17	NA	152646592	152647638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_152646600_152647600
ES.25242.3	chr4	+	4857	31	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-422	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.35835930539584	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTCTTCTGATGTTT	NA	False	NA	NA	False	AATGAA	-18	NA	152562176	152647639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568849_152568919_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.4	chr4	+	4488	19	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-421	-9483	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_14	6.19039478985961	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	152562177	152638021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260
ES.25242.5	chr4	+	4744	29	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-420	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	11.5429543843146	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152562178	152647640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583581_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623337_152623468_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.6	chr4	+	4962	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-420	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	8.66361725675035	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTCTCTTCTGATGTTT	NA	False	NA	NA	False	AATGAA	-18	NA	152562178	152647639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583581_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.7	chr4	+	4205	2	NNC	ENSMUSG00000039577.18	novel	1273	6	NA	NA	-420	-8476	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAGAAAAACAAAACAAAAC	NA	False	NA	NA	False	AAAACA	-28	NA	152562178	152566426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152566129_152566171
ES.25242.8	chr4	+	4576	28	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-417	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.3855008510662	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTAGTGTCTCTTCTGATG	NA	False	NA	NA	False	AATGAA	-15	NA	152562181	152647636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591939_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25242.9	chr4	+	8970	33	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-416	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.7793720375785	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152562182	152647640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152603773_152605827_152607898_152608175_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152637213_152638899_152638945_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ES.25243.1	chr4	-	2908	1	Intergenic	novelGene_21067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTTGTTTTAAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	152668183	152665275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152665300_152668200
ES.25243.2	chr4	-	518	2	Intergenic	novelGene_21068	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTTGTTTTAAAGC	NA	False	NA	NA	False	AATAAA	-22	NA	152668186	152665275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_152665662_152668054
ES.25244.1	chr4	+	177	1	Intergenic	novelGene_21069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAGAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	153151147	153151324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_153151100_153151300
ES.25245.1	chr4	-	1795	2	Intergenic	novelGene_21070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGGTTGGTTTTTTTT	NA	False	NA	0	True	NA	NA	NA	153174317	153169842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153171301_153173980
ES.25245.2	chr4	-	1595	2	Intergenic	novelGene_21071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTAATTTTGGTTGGTTT	NA	False	NA	-5	True	NA	NA	NA	153174174	153169847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153171301_153174032
ES.25246.1	chr4	+	176	1	Intergenic	novelGene_21072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAACTGTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	153175300	153175476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_153175300_153175500
ES.25247.1	chr4	-	177	1	Intergenic	novelGene_21073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	153194119	153193942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153193900_153194100
ES.25248.1	chr4	+	2420	1	Antisense	novelGene_ENSMUSG00000039546.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTATGTTCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	153567143	153569563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_153567100_153569600
ES.25249.1	chr4	-	1791	3	Intergenic	novelGene_21074	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	153632476	153603233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153604694_153605481_153605624_153632287
ES.2525.1	chr10	+	2277	7	NNC	ENSMUSG00000019883.12	novel	1845	6	NA	NA	10	388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.8358681142889	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCACGACCTATGGAT	NA	False	NA	9	True	AATAAA	-25	NA	29189171	29221944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_29189294_29192241_29192296_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ES.2525.2	chr10	+	1870	6	FSM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	67	-92	-48	92	multi-exon	FALSE	canonical	3	12	junction_1	32.6643536596088	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATCACCTTTTTGTT	NA	False	NA	94	True	NA	NA	NA	29189228	29221648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_29189294_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ES.2525.3	chr10	+	2399	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	-64	1521	-64	388	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCACGACCTATGGAT	NA	False	NA	9	True	AATAAA	-25	NA	29189431	29221944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ES.2525.4	chr10	+	1910	6	FSM	ENSMUSG00000019883.12	ENSMUST00000161426.2	634	6	-129	-1147	34	1147	multi-exon	FALSE	canonical	0	0	junction_5	38.0683595653924	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTGTTTGACATTC	NA	False	NA	NA	False	AATAAA	-26	NA	29189529	29211678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29210461
ES.2525.5	chr10	+	2035	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	81	1740	81	169	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACAGGACCCCACTTT	NA	False	NA	NA	False	AATACA	-18	NA	29189576	29221725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ES.2525.6	chr10	+	2103	5	ISM	ENSMUSG00000019883.12	ENSMUST00000160399.8	1845	6	4339	-388	3842	388	3prime_fragment	FALSE	canonical	3	81	junction_4	6.75925291729789	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCACGACCTATGGAT	NA	False	NA	9	True	AATAAA	-25	NA	29193500	29221944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ES.2525.7	chr10	+	8018	1	NIC	ENSMUSG00000019883.12	novel	3856	6	NA	NA	23883	3	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATGTCCATTCCAGAAT	1751	False	NA	5	True	AATAGA	-16	NA	29213541	29221559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_29213500_29221600
ES.2525.8	chr10	+	5423	1	NIC	ENSMUSG00000019883.12	novel	3856	6	NA	NA	26863	388	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCACGACCTATGGAT	503	False	NA	9	True	AATAAA	-25	NA	29216521	29221944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_29216500_29221900
ES.25250.1	chr4	-	2583	2	Intergenic	novelGene_21075	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGCAAGAGAGTGTTGA	NA	False	NA	NA	False	AATAAA	-45	NA	153643929	153638638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153639557_153642264
ES.25251.1	chr4	+	171	1	Intergenic	novelGene_21076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTGGCATTG	1431	False	NA	NA	False	NA	NA	NA	153699004	153699175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_153699000_153699200
ES.25252.1	chr4	-	4026	2	Intergenic	novelGene_21077	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTACCCTATGTGTGTGT	NA	False	NA	NA	False	AAAAAG	-15	NA	153716682	153707676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153711535_153716514
ES.25253.1	chr4	-	3597	4	Intergenic	novelGene_21078	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCCTCTGGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	153912368	153819013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_153821880_153822240_153822356_153911447_153911654_153911958
ES.25254.1	chr4	+	5280	3	NIC	ENSMUSG00000047613.11	novel	1098	4	NA	NA	-1756	0	intron_retention	FALSE	canonical	3	801	junction_2	23	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154039937	154046382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154044320_154044987_154045450_154045946
ES.25254.2	chr4	+	1207	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	-112	3	-112	-3	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGTGTTCACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	154041581	154046379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ES.25254.3	chr4	+	1108	4	FSM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	-49	-119	-20	-3	multi-exon	FALSE	canonical	3	119	junction_1	332.870345129551	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTGTGTTCACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	154041673	154046379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154041780_154044212_154044320_154044987_154045450_154045946
ES.25254.4	chr4	+	957	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	20	0	2	0	multi-exon	FALSE	canonical	3	25	junction_1	388	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACTGTGTTCACA	NA	False	NA	NA	False	AATAAA	-22	NA	154041713	154046375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154041780_154044987_154045450_154045946
ES.25254.5	chr4	+	1443	2	ISM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	20	11	2	-11	intron_retention	FALSE	canonical	3	25	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACTTTTAAAGAAATA	NA	False	NA	NA	False	AATAAA	-11	NA	154041713	154046364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154041780_154044987
ES.25254.6	chr4	+	4644	1	NIC	ENSMUSG00000047613.11	novel	977	3	NA	NA	8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAATACTGTGTTCAC	NA	False	NA	NA	False	AATAAA	-21	NA	154041730	154046374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154041700_154046400
ES.25254.7	chr4	+	1516	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	40	39	11	-32	intron_retention	FALSE	canonical	3	743	junction_1	52	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATAAAATATATTTT	NA	False	NA	NA	False	NA	NA	NA	154041733	154046343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154041780_154044205_154044320_154044987
ES.25254.8	chr4	+	1183	4	NIC	ENSMUSG00000047613.11	novel	1098	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	1	25	junction_1	377.120081082346	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACTGTGTTCACA	NA	False	NA	NA	False	AATAAA	-22	NA	154041760	154046375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154041939_154044205_154044320_154044987_154045450_154045946
ES.25255.1	chr4	-	5064	1	Genic_Genomic	ENSMUSG00000029027.10	novel	NA	NA	NA	NA	2899	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAAATTTTTTGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	154053967	154048903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_154048900_154054000
ES.25255.2	chr4	-	2046	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	48	-1	3	1	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTCAAAATTTTTTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	154059535	154048904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
ES.25255.3	chr4	-	4254	4	NNC	ENSMUSG00000029027.10	novel	2093	7	NA	NA	787	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6607133363712	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCAAAATTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	154056079	154048905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154052846_154053549_154053651_154054397_154054569_154056037
ES.25255.4	chr4	-	6291	3	NNC	ENSMUSG00000029027.10	novel	704	3	NA	NA	1420	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACATGTCAAAATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	154055446	154048908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154052429_154052580_154053101_154053195
ES.25255.5	chr4	-	2284	9	NNC	ENSMUSG00000029027.10	novel	1634	8	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	16.1767580188368	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGACATGTCAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	154059534	154048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154056342_154056518_154057064_154057136_154057236_154057426_154059025_154059153_154059323
ES.25255.8	chr4	-	1979	7	NNC	ENSMUSG00000029027.10	novel	2093	7	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	13.1497781983829	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGACATGTCAAAATT	NA	False	NA	NA	False	AATAAA	-9	NA	154059503	154048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057398_154059025_154059153_154059323
ES.25255.9	chr4	-	1420	7	NNC	ENSMUSG00000029027.10	novel	704	3	NA	NA	2	1583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4246870437348	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTAGCTGAGGACCCC	NA	False	NA	NA	False	ATTAAA	-14	NA	154059506	154052885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154053101_154053195_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
ES.25256.1	chr4	+	5258	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-85	-22	-85	22	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTAGCCTGGCTTTGC	NA	False	NA	35	True	AGTAAA	-32	NA	154059565	154093211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.12	chr4	+	4709	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-11	-440	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	21.7721659667649	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAATCCTTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	154059639	154092749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071419_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.13	chr4	+	5032	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	2	117	2	-117	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTTTTCTATTTGTC	NA	False	NA	NA	False	AATACA	-45	NA	154059652	154093072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.14	chr4	+	3633	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	8	-1504	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	19.8388061962538	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGAGCAGGTCCCTC	NA	False	NA	NA	False	AATAAA	-23	NA	154059658	154091685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.15	chr4	+	2641	12	ISM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	11	18231	11	425	5prime_fragment	FALSE	canonical	3	75	junction_10	10.7963875194935	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATAAGTACCAGGTA	NA	False	NA	NA	False	NA	NA	NA	154059661	154074958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231
ES.25256.16	chr4	+	5112	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	19	-12	intron_retention	FALSE	non_canonical	0	0	junction_8	27.6912848426328	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCGTTCAGTGTCATG	NA	False	NA	1	True	AATACA	-3	NA	154059669	154093177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069929_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081323_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.17	chr4	+	5153	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	19	-1	intron_retention	FALSE	canonical	0	0	junction_7	20.9191294590445	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCATGTCACTTTTATT	NA	False	NA	12	True	AGTAAA	-9	NA	154059669	154093188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069749_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.19	chr4	+	3241	23	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	26.4739073163566	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGTTCAGTGTCATGTCA	NA	False	NA	4	True	AGTAAA	-1	NA	154059670	154093180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146_154091228_154093102
ES.25256.20	chr4	+	3455	21	NIC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	46	-1511	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	21.8226373291589	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCTATTCTAAGAGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	154059696	154091678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154060055_154063400_154063553_154065627_154065802_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.22	chr4	+	4529	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	182	-434	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	19.8388061962538	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTCGTTTTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	154059832	154092755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.23	chr4	+	3445	24	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	200	-3	intron_retention	FALSE	canonical	0	0	junction_4	31.6968151513246	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCATGTCACTTTTA	NA	False	NA	10	True	AGTAAA	-7	NA	154059850	154093186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067125_154067191_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146_154091228_154092795
ES.25256.24	chr4	+	3469	21	NNC	ENSMUSG00000039523.17	novel	1787	15	NA	NA	5482	-1507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2429202219493	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTCTAAGAGCAGGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	154065132	154091682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154065514_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.25	chr4	+	4422	19	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	6439	6	intron_retention	FALSE	canonical	2	9	junction_11	21.1578430135885	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACTTTTATTACCCATC	NA	False	NA	19	True	AGTAAA	-16	NA	154066089	154093195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.26	chr4	+	4676	17	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-4870	471	intron_retention	FALSE	canonical	2	9	junction_9	22.3997767846021	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTATGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	154068053	154093660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.3	chr4	+	3705	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-61	1507	-61	-1507	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTCTAAGAGCAGGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	154059589	154091682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.4	chr4	+	4740	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-46	-434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.7450700749011	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTCGTTTTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	154059604	154092755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063530_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.5	chr4	+	3535	22	NIC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-42	-9	intron_retention	FALSE	canonical	0	0	junction_21	21.7931941361884	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGTTCAGTGTCATGTCA	NA	False	NA	4	True	AGTAAA	-1	NA	154059608	154093180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154092795
ES.25256.6	chr4	+	3863	22	NIC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-33	0	intron_retention	FALSE	canonical	1	1	junction_21	20.7279101335229	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTCACTTTTATTA	NA	False	NA	13	True	AGTAAA	-10	NA	154059617	154093189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146_154091228_154092795
ES.25256.7	chr4	+	5169	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-28	-3	intron_retention	FALSE	canonical	0	0	junction_13	21.8075482573748	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCATGTCACTTTTA	NA	False	NA	10	True	AGTAAA	-7	NA	154059622	154093186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077933_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.8	chr4	+	5172	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	-27	0	intron_retention	FALSE	canonical	2	9	junction_14	19.8388061962538	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTCACTTTTATTA	NA	False	NA	13	True	AGTAAA	-10	NA	154059623	154093189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25256.9	chr4	+	4747	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	-27	431	-27	-431	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGTTTTTAGCTCTCG	NA	False	NA	NA	False	AAAAAG	-3	NA	154059623	154092758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ES.25257.11	chr4	+	4167	6	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	53	junction_5	149.769956933959	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCATCAGCAGCC	NA	False	NA	13	True	AATAAA	-15	NA	154096244	154105967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154103941_154104087_154104449_154104494
ES.25257.12	chr4	+	3227	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096244	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104443_154104625
ES.25257.13	chr4	+	3322	7	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	0	intron_retention	FALSE	canonical	2	5	junction_6	155.40377515792	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096244	154105970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154103490_154103850_154103941_154104087_154104343_154104875
ES.25257.14	chr4	+	2335	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	-184	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCCTGTCTCCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	154096244	154104940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.15	chr4	+	3359	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTGCATCAGCAGCCT	NA	False	NA	14	True	AATAAA	-16	NA	154096244	154105968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104466_154104515
ES.25257.16	chr4	+	3346	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096244	154105970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104413_154104477
ES.25257.17	chr4	+	6208	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	199.586306838798	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096244	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154100004_154100045_154100233_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.18	chr4	+	6627	6	NIC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	350	junction_5	41.1698919114442	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096247	154105970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ES.25257.19	chr4	+	3332	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCATCAGCAGCC	NA	False	NA	13	True	AATAAA	-15	NA	154096249	154105967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104716_154104786
ES.25257.2	chr4	+	3432	7	FSM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	-29	-8	-29	7	multi-exon	FALSE	canonical	3	350	junction_6	37.5972812255827	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCAGCCTTAGCACATG	NA	False	NA	23	True	AATAAA	-25	NA	154096230	154105977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ES.25257.20	chr4	+	2570	7	FSM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	-5	830	-5	15	multi-exon	FALSE	canonical	3	350	junction_6	37.5972812255827	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGAGCTTGTTT	NA	False	NA	55	True	TTTAAA	-43	NA	154096254	154105139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ES.25257.21	chr4	+	3796	7	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	53	junction_6	138.066409141881	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCATCAGCAGCC	NA	False	NA	13	True	AATAAA	-15	NA	154096254	154105967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.24	chr4	+	3355	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096259	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104455_154104494
ES.25257.25	chr4	+	3352	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104716_154104759
ES.25257.26	chr4	+	3375	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	172.945786008099	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096260	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102799_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.27	chr4	+	3294	6	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	170.34013032753	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCATCAGCAGCC	NA	False	NA	13	True	AATAAA	-15	NA	154096262	154105967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102947_154103847_154103941_154104087
ES.25257.28	chr4	+	3287	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTGCATCAGCAGCC	NA	False	NA	13	True	AATAAA	-15	NA	154096263	154105967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104443_154104544
ES.25257.29	chr4	+	3037	9	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.000317950288	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096263	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096391_154096698_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.3	chr4	+	2528	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCATGTTGTGAGTGTA	NA	False	NA	36	True	AATAGA	-37	NA	154096231	154105120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.30	chr4	+	3246	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTGCATCAGCAGCCT	NA	False	NA	14	True	AATAAA	-16	NA	154096272	154105968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104466_154104600
ES.25257.31	chr4	+	3336	6	ISM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	2376	902	2376	-57	3prime_fragment	FALSE	canonical	3	350	junction_5	41.1698919114442	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACATGTTAATAGAATT	NA	False	NA	-17	True	NA	NA	NA	154098635	154105067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ES.25257.32	chr4	+	1318	2	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	331	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154104426	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154104528_154104752
ES.25257.4	chr4	+	3374	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	149.446598202454	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096231	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104457_154104505
ES.25257.5	chr4	+	3378	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096231	154105970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
ES.25257.7	chr4	+	3361	7	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	-24	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	158.527337284983	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTCTGCATCAGCAGC	NA	False	NA	12	True	AATAAA	-14	NA	154096235	154105966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154096894_154100112_154100566_154101929_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ES.25257.9	chr4	+	2863	8	NIC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	148.085744604611	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096240	154105969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104343_154104893
ES.25258.1	chr4	-	3039	5	NNC	ENSMUSG00000078350.12	novel	3373	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.1492574075431	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCGTTCAACCTGACT	NA	False	NA	NA	False	AATAAA	-16	NA	154110423	154105042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154106246_154106454_154107911_154108144_154108349_154109960_154110079_154110365
ES.25258.2	chr4	-	3244	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	184	-2721	0	-2	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCCTGCGTTCAACCT	NA	False	NA	NA	False	AATAAA	-12	NA	154110423	154105046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
ES.25258.3	chr4	-	3337	4	NIC	ENSMUSG00000078350.12	novel	707	4	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.613540144522	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCCTGCGTTCAACCT	NA	False	NA	NA	False	AATAAA	-12	NA	154110422	154105046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154107911_154108050_154108349_154109960_154110079_154110365
ES.25258.4	chr4	-	520	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	211	-24	-3	23	multi-exon	FALSE	canonical	3	33	junction_2	2.35702260395516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGCCATTTGTGCAGA	NA	False	NA	1	True	AATAAA	-40	NA	154110396	154107743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
ES.25258.5	chr4	-	2092	3	NIC	ENSMUSG00000078350.12	novel	842	4	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	16.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGGGGATTCCCTCCC	NA	False	NA	-23	True	AATAAA	-16	NA	154110395	154107767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154108275_154108523_154110079_154110365
ES.25259.1	chr4	+	7732	1	Antisense	novelGene_ENSMUSG00000029026.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTCGGTTGTCAC	NA	False	NA	NA	False	AATAAA	-16	NA	154165652	154173384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_154165700_154173400
ES.2526.1	chr10	+	1599	1	Antisense	novelGene_ENSMUSG00000038876.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCAGAAAATAAGACAGTG	NA	False	NA	NA	False	AAAACA	-44	NA	29235766	29237365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_29235800_29237400
ES.25260.1	chr4	-	4716	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3214	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATTGTAACTAACCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	154166565	154140704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
ES.25260.4	chr4	-	5117	11	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	32	-2	intron_retention	TRUE	canonical	0	0	junction_8	7.98498591107085	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTGACTATTGTAACT	NA	False	NA	NA	False	AATAAA	-14	NA	154181592	154140711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151578_154152033_154152221_154165785_154166029_154181350
ES.25260.5	chr4	-	2693	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3214	241	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTGCTTTTTCCCCCC	NA	False	NA	9	True	GATAAA	-26	NA	154166565	154142727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
ES.25260.7	chr4	-	2489	12	FSM	ENSMUSG00000029026.18	ENSMUST00000133533.8	4752	12	25	2238	19	21	multi-exon	FALSE	canonical	1	1	junction_11	6.38697020736374	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCCTTGTCTCCCGAGTC	NA	False	NA	NA	False	NA	NA	NA	154181605	154142947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154181350
ES.25261.1	chr4	-	158	1	Intergenic	novelGene_21079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	154217420	154217262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_154217300_154217400
ES.25262.1	chr4	+	4884	8	NNC	ENSMUSG00000029029.15	novel	3959	10	NA	NA	1	-1	intron_retention	TRUE	canonical	0	0	junction_6	21.7677912222136	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAACAGTGGTGGTTGTT	NA	False	NA	24	True	TATAAA	-29	NA	154226829	154241272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236933_154237017_154237153_154237249
ES.25262.2	chr4	+	1600	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	1	-3	1	3	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGGTGGTTGTTTTCT	NA	False	NA	28	True	TATAAA	-33	NA	154226829	154241276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ES.25262.3	chr4	+	3273	11	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	16	-1452	16	1452	intron_retention	FALSE	canonical	3	51	junction_4	7.11407056473296	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTCTAATCGGATAC	NA	False	NA	NA	False	AATATA	-12	NA	154226844	154242725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557
ES.25262.4	chr4	+	1811	11	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	20	6	-17	-6	intron_retention	FALSE	canonical	3	51	junction_4	7.11407056473296	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTGAACAGTGGTGG	NA	False	NA	19	True	TATAAA	-24	NA	154226848	154241267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557
ES.25262.5	chr4	+	4031	9	NNC	ENSMUSG00000029029.15	novel	1598	12	NA	NA	-6	5	intron_retention	FALSE	non_canonical	0	0	junction_2	21.7198066289735	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTGGTTGTTTTCTTC	NA	False	NA	30	True	TATAAA	-35	NA	154226859	154241278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154226971_154229699_154230439_154230647_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991
ES.25262.6	chr4	+	3017	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	33	-1452	-4	1452	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTCTAATCGGATAC	NA	False	NA	NA	False	AATATA	-12	NA	154226861	154242725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ES.25262.7	chr4	+	3128	9	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	37	6	0	-6	intron_retention	FALSE	canonical	3	51	junction_4	7.24568837309472	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTGAACAGTGGTGG	NA	False	NA	19	True	TATAAA	-24	NA	154226865	154241267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991
ES.25262.8	chr4	+	1465	11	NIC	ENSMUSG00000029029.15	novel	1598	12	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	19.4085032910835	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAACAGTGGTGGTTG	NA	False	NA	22	True	TATAAA	-27	NA	154226871	154241270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ES.25262.9	chr4	+	1558	12	NNC	ENSMUSG00000029029.15	novel	399	5	NA	NA	268	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9584146911947	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTGGTGGTTGTTTTC	NA	False	NA	27	True	TATAAA	-32	NA	154227133	154241275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154227234_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ES.25263.1	chr4	-	233	1	Intergenic	novelGene_21080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTTTGTTTT	NA	False	NA	NA	False	AAGAAA	-36	NA	154230643	154230410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_154230400_154230600
ES.25264.1	chr4	-	2742	1	Antisense	novelGene_ENSMUSG00000029029.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTGCTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	154237254	154234512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_154234500_154237300
ES.25265.1	chr4	-	1597	3	FSM	ENSMUSG00000029030.15	ENSMUST00000134492.2	915	3	-25	-657	-25	2	multi-exon	FALSE	canonical	3	8	junction_1	369	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTCCTTTTTGAAGT	NA	False	NA	-1	True	AGTAAA	-18	NA	154245148	154241939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154244541_154244719_154244811
ES.25265.10	chr4	-	2390	3	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	665	junction_1	40.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	154245130	154241944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154243023_154243725_154244719_154244811
ES.25265.11	chr4	-	2448	3	NNC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-20	-3	intron_retention	FALSE	canonical	0	0	junction_1	373	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	154245143	154241944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154243880_154244537_154244719_154244811
ES.25265.13	chr4	-	1789	4	NNC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	332.33951849811	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGGAGTTGCTCC	NA	False	NA	-11	True	AGTAAA	-8	NA	154245122	154241949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154243023_154243725_154243880_154244467_154244719_154244811
ES.25265.14	chr4	-	1421	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	71	232	11	-232	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCACTGAGCACTGCT	NA	False	NA	NA	False	TATAAA	-15	NA	154245052	154242173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ES.25265.15	chr4	-	1305	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-31	450	-31	205	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCTGTGAATGTGTC	NA	False	NA	NA	False	AAGAAA	-31	NA	154245154	154242391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ES.25265.16	chr4	-	2645	2	FSM	ENSMUSG00000029030.15	ENSMUST00000133165.2	947	2	-70	-1628	-10	201	multi-exon	FALSE	canonical	3	746	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTTTCTGTGAATG	NA	False	NA	NA	False	AAGAAA	-27	NA	154245133	154242395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154244719_154244811
ES.25265.17	chr4	-	1324	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-10	201	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTTTCTGTGAATG	NA	False	NA	NA	False	AAGAAA	-27	NA	154245133	154242395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
ES.25265.18	chr4	-	1176	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-24	572	-24	83	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTAACTCTCAAGTGC	NA	False	NA	NA	False	NA	NA	NA	154245147	154242513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ES.25265.19	chr4	-	1055	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-37	706	-37	-51	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGTTCCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	154245160	154242647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ES.25265.2	chr4	-	1770	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-44	-2	-44	2	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTCCTTTTTGAAGT	NA	False	NA	-1	True	AGTAAA	-18	NA	154245167	154241939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ES.25265.3	chr4	-	3190	1	Genic_Genomic	ENSMUSG00000029030.15	novel	NA	NA	NA	NA	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245131	154241941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_154241900_154245100
ES.25265.4	chr4	-	3094	2	FSM	ENSMUSG00000029030.15	ENSMUST00000133165.2	947	2	-65	-2082	-5	0	multi-exon	FALSE	canonical	3	746	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245128	154241941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154244719_154244811
ES.25265.5	chr4	-	2497	2	ISM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	-18	0	-18	0	intron_retention	FALSE	canonical	3	665	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245141	154241941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_154243023_154243725
ES.25265.6	chr4	-	3063	2	NNC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-24	0	intron_retention	FALSE	canonical	2	3	junction_1	0	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245147	154241941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154244719_154244861
ES.25265.7	chr4	-	1715	4	NNC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	322.68285083379	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	154245167	154241944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154243023_154243725_154243880_154244541_154244719_154244861
ES.25265.8	chr4	-	1635	3	NIC	ENSMUSG00000029030.15	novel	915	3	NA	NA	-24	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	370.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	154245147	154241944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154243023_154244497_154244719_154244811
ES.25265.9	chr4	-	1789	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGAGTTGCTCCTTTTT	NA	False	NA	-6	True	AGTAAA	-13	NA	154245147	154241944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
ES.25266.1	chr4	+	5626	37	FSM	ENSMUSG00000057751.15	ENSMUST00000030897.15	6851	37	-37	1262	-37	323	multi-exon	FALSE	canonical	0	0	junction_13	2.35636778449428	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGGTTTCTGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	154255149	154358908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154255600_154261495_154261631_154267114_154267225_154308557_154308681_154326858_154326982_154333883_154334010_154335278_154335402_154336585_154336709_154336880_154337019_154337482_154337603_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ES.25266.2	chr4	+	5739	37	FSM	ENSMUSG00000057751.15	ENSMUST00000030897.15	6851	37	-18	1130	-18	455	multi-exon	FALSE	canonical	0	0	junction_13	2.35636778449428	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTTCCTGACTTCCAG	NA	False	NA	NA	False	NA	NA	NA	154255168	154359040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154255600_154261495_154261631_154267114_154267225_154308557_154308681_154326858_154326982_154333883_154334010_154335278_154335402_154336585_154336709_154336880_154337019_154337482_154337603_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ES.25266.3	chr4	+	6872	37	FSM	ENSMUSG00000057751.15	ENSMUST00000030897.15	6851	37	-17	-4	-17	4	multi-exon	FALSE	canonical	0	0	junction_13	2.35636778449428	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCACAGGATCTAGCCT	NA	False	NA	NA	False	AATAAA	-24	NA	154255169	154360174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154255600_154261495_154261631_154267114_154267225_154308557_154308681_154326858_154326982_154333883_154334010_154335278_154335402_154336585_154336709_154336880_154337019_154337482_154337603_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ES.25266.4	chr4	+	234	1	Intergenic	novelGene_21081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATAGGGCCAGAAAGCA	NA	False	NA	NA	False	GGGGCT	-31	NA	154280621	154280855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_154280600_154280900
ES.25266.5	chr4	+	4334	29	NNC	ENSMUSG00000057751.15	novel	995	8	NA	NA	3492	450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.55026009077746	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGGGTTCTTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	154337244	154359035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154337359_154337482_154337521_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ES.25266.6	chr4	+	5515	24	NIC	ENSMUSG00000057751.15	novel	6851	37	NA	NA	4813	451	intron_retention	FALSE	canonical	0	0	junction_2	2.38932724591897	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGGTTCTTCCTGACTT	NA	False	NA	NA	False	NA	NA	NA	154338565	154359036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ES.25267.1	chr4	+	415	2	Antisense	novelGene_ENSMUSG00000029032.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACAGCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	154384052	154385689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_154384183_154385404
ES.25268.1	chr4	-	4475	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-16	1650	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGGTGTCAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	154384365	154361292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
ES.25268.2	chr4	-	3129	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-142	16	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCTCATGTTCTGT	NA	False	NA	50	True	AATATA	-20	NA	154384653	154362926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
ES.25268.3	chr4	-	2753	15	NNC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-17	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	9.16654297999424	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCTCATGTTCTG	NA	False	NA	49	True	AATATA	-19	NA	154384366	154362927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371569_154372424_154372471_154375392_154376011_154384281
ES.25268.4	chr4	-	3263	14	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	3	-34	intron_retention	FALSE	canonical	3	21	junction_11	5.0920520502878	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGAGCCACCTGTTTC	NA	False	NA	0	True	CATAAA	-25	NA	154384346	154362976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
ES.25268.5	chr4	-	2845	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	-28	43	-28	-43	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACATGTGAGCC	NA	False	NA	-9	True	CATAAA	-16	NA	154384539	154362985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
ES.25268.6	chr4	-	3448	16	NNC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	1670	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.90488095166553	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACATGTGAGCC	NA	False	NA	-9	True	CATAAA	-16	NA	154382679	154362985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154381929
ES.25268.7	chr4	-	5457	10	NIC	ENSMUSG00000029032.13	novel	4123	14	NA	NA	-8	-43	intron_retention	FALSE	canonical	2	9	junction_9	9.94180598145224	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACATGTGAGCC	NA	False	NA	-9	True	CATAAA	-16	NA	154384357	154362985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154363553_154364154_154365927_154366280_154366374_154366462_154367370_154369441_154369603_154370070_154370128_154371375_154372471_154375392_154376011_154377288_154377400_154384281
ES.25268.8	chr4	-	2708	16	NNC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	10	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.90488095166553	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGTTTTACATGTG	NA	False	NA	-13	True	CATAAA	-12	NA	154384339	154362989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377356_154384281
ES.25268.9	chr4	-	2761	16	NNC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	-7	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.7715675120507	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGTTTTACATGTG	NA	False	NA	-13	True	CATAAA	-12	NA	154384356	154362989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371538_154372424_154372471_154375392_154376011_154377288_154377400_154384281
ES.25269.1	chr4	+	576	3	NNC	ENSMUSG00000097871.2	novel	876	4	NA	NA	11219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGCTGTGCTGTGCTGT	NA	False	NA	NA	False	CATAAA	-16	NA	154431802	154434375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154431906_154432140_154432200_154433961
ES.2527.1	chr10	-	3914	1	Antisense	novelGene_ENSMUSG00000019883.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGGTAAACAGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	29213037	29209123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_29209100_29213000
ES.25270.1	chr4	+	2391	2	Antisense	novelGene_ENSMUSG00000039410.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTACGTCACCACACGG	NA	False	NA	NA	False	AATAAA	-22	NA	154439495	154443207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_154440091_154441411
ES.25271.1	chr4	+	162	1	Intergenic	novelGene_21082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAACTG	NA	False	NA	NA	False	NA	NA	NA	154554399	154554561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_154554400_154554600
ES.25272.1	chr4	+	4314	2	FSM	ENSMUSG00000084987.2	ENSMUST00000132106.2	738	2	-108	-3468	10	1970	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTTCCTGTGTGTCT	2936	False	NA	NA	False	NA	NA	NA	154685663	154690629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154685865_154686516
ES.25272.2	chr4	+	2344	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	11	-1968	11	1968	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAATCTTCCTGTGTGT	2937	False	NA	NA	False	NA	NA	NA	154685664	154690627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_154685865_154688483
ES.25272.3	chr4	+	2334	2	NNC	ENSMUSG00000084987.2	novel	387	2	NA	NA	326	1970	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTTCCTGTGTGTCT	3370	False	NA	NA	False	NA	NA	NA	154686097	154690629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154686286_154688483
ES.25273.1	chr4	-	8577	17	NIC	ENSMUSG00000039410.17	novel	8601	17	NA	NA	28	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	7.82998044378145	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCGGTGCCTGCAAGC	NA	False	NA	NA	False	AATAAA	-16	NA	154721295	154400580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422188_154425177_154426595_154429778_154429933_154430451_154430600_154432380_154432592_154439703_154439807_154451634_154451773_154561095_154561147_154613038_154613389_154721179
ES.25273.11	chr4	-	3177	6	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-3	-2354	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.87022561492707	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAAGGTGTGTGCTTTT	NA	False	NA	-5	True	NA	NA	NA	154419382	154402935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154413120_154413291_154418831_154418910_154419306
ES.25273.12	chr4	-	5919	14	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-9096	-2356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.03247845058868	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	-7	True	NA	NA	NA	154442010	154402937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422185_154425177_154426595_154429778_154429933_154430451_154430600_154432380_154432592_154439703_154439807_154441653
ES.25273.13	chr4	-	3447	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5233	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	-7	True	NA	NA	NA	154414076	154402937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
ES.25273.14	chr4	-	6217	17	NIC	ENSMUSG00000039410.17	novel	8601	17	NA	NA	27	-2360	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	7.82998044378145	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGAGCAAGGTGTGT	NA	False	NA	-11	True	NA	NA	NA	154721296	154402941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422188_154425177_154426595_154429778_154429933_154430451_154430600_154432380_154432592_154439703_154439807_154451634_154451773_154561095_154561147_154613038_154613389_154721179
ES.25273.15	chr4	-	2535	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	-4	-2997	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGTGTTCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	154419383	154403578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
ES.25273.16	chr4	-	5081	14	NNC	ENSMUSG00000039410.17	novel	8601	17	NA	NA	-9060	-3161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.96664644761532	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGATAAGGTTGTGTG	NA	False	NA	NA	False	AATATA	-22	NA	154441974	154403742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422188_154425177_154426595_154429778_154429933_154430451_154430600_154432380_154432592_154439703_154439807_154441653
ES.25273.17	chr4	-	2642	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5233	-3161	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGATAAGGTTGTGTG	NA	False	NA	NA	False	AATATA	-22	NA	154414076	154403742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
ES.25273.18	chr4	-	3749	8	ISM	ENSMUSG00000039410.17	ENSMUST00000070313.14	8429	16	294944	3166	6535	-3166	3prime_fragment	FALSE	canonical	2	4	junction_7	8.11901270764733	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACCGTGTGATAAGGTT	NA	False	NA	NA	False	AATATA	-17	NA	154426379	154403747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422188_154425177
ES.25273.2	chr4	-	3275	5	NNC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	5234	-2352	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	9.73396116696589	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGTGTGTGCTTTTTT	NA	False	NA	-3	True	NA	NA	NA	154414075	154402933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154413825
ES.25273.20	chr4	-	2348	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	13	-3167	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAACCGTGTGATAAGGT	NA	False	NA	NA	False	AATATA	-16	NA	154419366	154403748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
ES.25273.21	chr4	-	2524	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	8	-3171	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	6.36177822799744	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACCAAACCGTGTGATA	NA	False	NA	NA	False	AATATA	-12	NA	154419371	154403752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
ES.25273.22	chr4	-	1587	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	-5	3055	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.81816307401944	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCAAAATGTTTTTTT	NA	False	NA	NA	False	AATAGA	-35	NA	154419314	154404732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
ES.25273.23	chr4	-	4745	1	Intergenic	novelGene_21083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTTCAGTTCCTCG	NA	False	NA	NA	False	AATAAA	-12	NA	154719894	154715149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_154715100_154719900
ES.25273.3	chr4	-	6340	16	FSM	ENSMUSG00000039410.17	ENSMUST00000070313.14	8429	16	-264	2353	-257	-2353	multi-exon	FALSE	canonical	0	0	junction_13	7.69299825960088	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154721587	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422188_154425177_154426595_154429778_154429933_154430451_154430600_154432380_154432592_154439703_154439807_154451634_154451773_154561095_154561147_154613038_154613389_154721179
ES.25273.4	chr4	-	3375	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-25	-2353	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	6.36177822799744	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154419404	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
ES.25273.6	chr4	-	6212	17	NNC	ENSMUSG00000039410.17	novel	8602	17	NA	NA	27	-2353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.99609279585974	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154721296	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419549_154419720_154422099_154422185_154425177_154426595_154429778_154429933_154430451_154430600_154432386_154432592_154439703_154439807_154451634_154451770_154561095_154561147_154613038_154613389_154721179
ES.25273.7	chr4	-	3164	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	11	-2353	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.38093073590279	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154419368	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419306
ES.25273.8	chr4	-	3573	7	NIC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	-18	-2353	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	6.91415617089718	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154419327	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
ES.25273.9	chr4	-	3450	6	NIC	ENSMUSG00000039410.17	novel	8429	16	NA	NA	0	-2353	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.81816307401944	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGGTGTGTGCTTTTT	NA	False	NA	-4	True	NA	NA	NA	154419379	154402934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
ES.25274.1	chr4	-	3834	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	-391	-29	-391	29	multi-exon	FALSE	canonical	3	15	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAAGTCACAAGTTTA	NA	False	NA	7	True	ATTAAA	-27	NA	154740166	154730181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154733095_154739245
ES.25274.2	chr4	-	3346	1	Genic_Genomic	ENSMUSG00000086810.2	novel	NA	NA	NA	NA	6236	17	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAATAGTGATTTGTAA	NA	False	NA	-5	True	ATTAAA	-15	NA	154733539	154730193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_154730200_154733500
ES.25274.3	chr4	-	4673	2	NNC	ENSMUSG00000086810.2	novel	3414	2	NA	NA	598	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCAAATGC	NA	False	NA	-22	True	NA	NA	NA	154739177	154730210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_154733095_154737388
ES.25274.4	chr4	-	2230	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	307	877	307	-877	multi-exon	FALSE	canonical	3	15	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGCCTCTTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	154739468	154731087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154733095_154739245
ES.25275.1	chr4	+	2581	1	Intergenic	novelGene_21084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAATCAAAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	154740278	154742859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_154740300_154742900
ES.25276.1	chr4	+	980	3	Intergenic	novelGene_21085	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAGCAGTGATGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	154766198	154767519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_154766350_154766491_154766562_154766760
ES.25277.1	chr4	+	3165	2	Intergenic	novelGene_21086	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	154796025	154799235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_154797543_154797587
ES.25278.1	chr4	+	2621	7	NNC	ENSMUSG00000046637.4	novel	3200	7	NA	NA	1166	-245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGCGCCTGCTTCTCAC	NA	False	NA	NA	False	AATAAA	-14	NA	154923081	154945849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154923164_154923247_154924068_154940095_154940901_154942417_154942644_154943766_154943972_154945017_154945270_154945618
ES.25278.2	chr4	+	1180	5	NNC	ENSMUSG00000046637.4	novel	3200	7	NA	NA	168	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTTTGTTTGTTTCG	3632	False	NA	NA	False	NA	NA	NA	154940824	154946039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154940901_154942417_154942644_154943766_154943972_154945017_154945270_154945618
ES.25279.1	chr4	+	2336	20	NNC	ENSMUSG00000058183.15	novel	2592	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.2358791892504	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGACTTTGTTTTGTA	1585	False	NA	3	True	AGTAAA	-7	NA	154966671	154979978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_154966787_154967629_154967792_154968080_154968162_154969402_154969499_154970611_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
ES.25279.2	chr4	+	2459	21	ISM	ENSMUSG00000058183.15	ENSMUST00000163732.8	2935	24	12630	7	6	0	3prime_fragment	FALSE	canonical	1	1	junction_4	3.09838667696593	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGACTTTGTTTTGTA	1585	False	NA	3	True	AGTAAA	-7	NA	154966671	154979978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_154966787_154967629_154967792_154968080_154968162_154969402_154969499_154969960_154970080_154970607_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
ES.25279.3	chr4	+	2040	16	NIC	ENSMUSG00000058183.15	novel	2592	22	NA	NA	2544	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.53647658929996	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGACTTTGTTTTGTA	4123	False	NA	3	True	AGTAAA	-7	NA	154969209	154979978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154969499_154970607_154970674_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
ES.25279.4	chr4	+	2157	17	NIC	ENSMUSG00000058183.15	novel	2935	24	NA	NA	2564	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.15980616494113	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTTTGTTTTGTACA	4143	False	NA	5	True	AGTAAA	-9	NA	154969229	154979980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_154969499_154970607_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
ES.2528.1	chr10	-	6940	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	360	-2977	-35	2977	multi-exon	FALSE	canonical	3	77	junction_2	74.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTTGTGTATTAAC	NA	False	NA	NA	False	ATTAAA	-24	NA	29238078	29217194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.11	chr10	-	2120	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	404	1799	9	201	multi-exon	FALSE	canonical	3	77	junction_2	74.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	AATAAA	-10	NA	29238034	29221970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.12	chr10	-	2186	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-37	-201	-37	201	multi-exon	FALSE	canonical	3	93	junction_2	66.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	AATAAA	-10	NA	29238080	29221970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237959
ES.2528.13	chr10	-	2230	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-41	-1244	-20	201	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCCATAGGTCGTG	NA	False	NA	NA	False	AATAAA	-10	NA	29238063	29221970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
ES.2528.14	chr10	-	2023	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	-33	-1045	-12	2	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGTTTGAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	29238055	29222169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
ES.2528.15	chr10	-	1941	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	384	1998	-11	2	multi-exon	FALSE	canonical	3	77	junction_2	74.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGTTTGAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	29238054	29222169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.16	chr10	-	1948	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	2	-2	2	2	multi-exon	FALSE	canonical	3	93	junction_2	66.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTGTTTGAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	29238041	29222169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237959
ES.2528.17	chr10	-	1878	3	NNC	ENSMUSG00000038876.13	novel	4323	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAATTTGTTTGAGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	29238038	29222170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_29223880_29230333_29230444_29237979
ES.2528.18	chr10	-	1910	3	NNC	ENSMUSG00000038876.13	novel	1948	3	NA	NA	-30	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATACTAGAGTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	29238073	29222193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_29223880_29230333_29230444_29237959
ES.2528.19	chr10	-	1939	4	NNC	ENSMUSG00000038876.13	novel	781	4	NA	NA	5	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.309036546325	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATACTAGAGTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	29238017	29222193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_29223880_29230287_29230444_29237280_29237340_29237979
ES.2528.2	chr10	-	7591	3	ISM	ENSMUSG00000038876.13	ENSMUST00000037548.11	4402	4	404	-2975	9	2973	intron_retention	FALSE	canonical	3	41	junction_2	92.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAATAAGCTTTGTGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	29238034	29217198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_29223880_29230287_29230444_29237280
ES.2528.20	chr10	-	1788	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	347	2188	-48	-188	multi-exon	FALSE	canonical	3	77	junction_2	74.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTGGTCTTCTTGAGA	NA	False	NA	50	True	AATAGA	-12	NA	29238091	29222359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.21	chr10	-	1741	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-35	242	-35	240	multi-exon	FALSE	canonical	3	93	junction_2	66.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGCAGGAAGCTTGATG	NA	False	NA	-4	True	AATAAA	-31	NA	29238078	29222413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237959
ES.2528.22	chr10	-	1736	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	-5	-950	-5	224	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTGATATCATTATG	NA	False	NA	-20	True	AATAAA	-15	NA	29238048	29222429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
ES.2528.23	chr10	-	7848	2	NIC	ENSMUSG00000038876.13	novel	4323	3	NA	NA	5	-1	intron_retention	FALSE	canonical	3	77	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGCTGAAATTTATTT	NA	False	NA	NA	False	ATTAAA	-12	NA	29238038	29222654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_29230444_29237979
ES.2528.24	chr10	-	1440	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	25	483	4	-1	multi-exon	FALSE	canonical	3	93	junction_2	66.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGCTGAAATTTATTT	NA	False	NA	NA	False	ATTAAA	-12	NA	29238018	29222654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237959
ES.2528.3	chr10	-	5712	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	374	-1763	-21	1763	multi-exon	FALSE	canonical	3	77	junction_2	74.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTGGCGATAACAAAAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	29238064	29218408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.4	chr10	-	4004	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	-56	-2000	-56	0	multi-exon	FALSE	canonical	3	93	junction_2	66.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTCAACTTTTC	NA	False	NA	2	True	AATAAA	-20	NA	29238099	29220171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237959
ES.2528.5	chr10	-	3962	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	360	1	-35	-1	multi-exon	FALSE	canonical	3	77	junction_2	74.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTGTTTCAACTTTT	NA	False	NA	1	True	AATAAA	-19	NA	29238078	29220172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237979
ES.2528.6	chr10	-	3971	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	16	-3206	-5	0	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTTGTTTCAACTTT	NA	False	NA	0	True	AATAAA	-18	NA	29238027	29220173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
ES.2528.7	chr10	-	4011	4	FSM	ENSMUSG00000038876.13	ENSMUST00000037548.11	4402	4	390	1	-5	-1	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTTGTTTCAACTT	NA	False	NA	-1	True	AATAAA	-17	NA	29238048	29220174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
ES.2528.8	chr10	-	3684	5	NNC	ENSMUSG00000038876.13	novel	781	4	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.7534059313331	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTTGTTTCAACTT	NA	False	NA	-1	True	AATAAA	-17	NA	29238054	29220174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_29223415_29223727_29223880_29230287_29230444_29237280_29237342_29237979
ES.2528.9	chr10	-	2586	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	9	-1814	9	606	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTTTGGGTTATGTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	29238034	29221565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
ES.25280.1	chr4	-	259	1	Intergenic	novelGene_21087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGACGGGAAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	154969127	154968868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_154968900_154969100
ES.25281.1	chr4	-	1157	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	68	-342	-4	342	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATCTGAATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	154983499	154980513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
ES.25281.2	chr4	-	869	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	11	3	11	-3	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCCCGTCCTTCCCACA	NA	False	NA	-9	True	ATTAAA	-42	NA	154983556	154980858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
ES.25282.1	chr4	-	4882	8	FSM	ENSMUSG00000042333.17	ENSMUST00000219534.3	1173	8	-108	-3601	17	3601	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGTCTTGTGTC	6776	False	NA	NA	False	AATAAA	-16	NA	155012642	155002788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155006785_155006936_155006969_155007654_155007819_155008870_155008962_155009719_155009876_155011055_155011182_155011595_155011705_155012434
ES.25283.1	chr4	+	4479	14	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	67	junction_10	32.5472801288676	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048576	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054635_155054903_155055485_155055829_155056012_155056605_155057027_155059086_155059243_155060718_155061128_155061659_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.10	chr4	+	4795	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	67	junction_13	31.8077722420166	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCATCTGGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	155048585	155065387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.11	chr4	+	5515	15	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-3	-21	intron_retention	FALSE	canonical	3	107	junction_12	22.5149610123525	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATACATACACATGT	NA	False	NA	NA	False	NA	NA	NA	155048586	155065370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155064050_155064182_155064252_155064951
ES.25283.12	chr4	+	4593	18	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	67	junction_14	31.3139035195745	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048586	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.13	chr4	+	2811	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	19	junction_8	38.7676960374919	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048589	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.14	chr4	+	4977	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	-4	intron_retention	FALSE	canonical	3	88	junction_7	27.1221196627402	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCATCTGGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	155048589	155065387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.15	chr4	+	5413	16	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	-6	intron_retention	FALSE	canonical	3	67	junction_12	28.8070978907784	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCATCTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	155048589	155065385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.16	chr4	+	5979	16	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	-14	intron_retention	FALSE	canonical	0	0	junction_3	49.0195425881919	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATGTGCTCATC	NA	False	NA	NA	False	NA	NA	NA	155048589	155065377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054434_155054635_155054903_155054997_155055330_155055485_155055829_155056688_155056925_155059243_155060718_155060832_155061039_155061128_155061659_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.17	chr4	+	4857	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	107	junction_13	22.2541253198143	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCTGGTGAGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	155048590	155065390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.18	chr4	+	3389	17	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	45.4970809503203	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155048590	155065389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056688_155056925_155057027_155059086_155059243_155060689_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.19	chr4	+	1826	15	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	57.0302909130986	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCTGGTGAGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	155048590	155065390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054132_155056617_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.2	chr4	+	4634	18	NIC	ENSMUSG00000029056.14	novel	2508	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	88	junction_8	26.3816807573887	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048579	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.20	chr4	+	3361	16	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-6	intron_retention	FALSE	canonical	3	67	junction_12	30.9982078335005	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCATCTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	155048590	155065385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155055485_155055829_155056012_155056605_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.21	chr4	+	4949	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	67	junction_13	32.2487887369433	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048590	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.22	chr4	+	3027	18	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	1	intron_retention	FALSE	canonical	3	88	junction_8	27.811899074026	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155048590	155065392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155064050_155064182_155064252_155064951
ES.25283.23	chr4	+	5491	15	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	107	junction_11	23.4813212784032	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048590	155065395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.24	chr4	+	2893	18	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	88	junction_7	27.9534957362301	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCTGGTGAGAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	155048591	155065391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.25	chr4	+	5028	16	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	3	-2	intron_retention	FALSE	canonical	3	67	junction_12	28.7467099566774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155048592	155065389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.26	chr4	+	12700	5	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	1744	intron_retention	FALSE	canonical	3	126	junction_3	14.7394029729837	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGAGGTCTTGCTGGACT	NA	False	NA	NA	False	NA	NA	NA	155048593	155067139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155056012_155056605_155062664_155062849
ES.25283.27	chr4	+	7224	11	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	1	intron_retention	FALSE	canonical	3	107	junction_8	26.309884074241	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155048593	155065392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155064050_155064182_155064252_155064951
ES.25283.28	chr4	+	7735	11	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	0	intron_retention	FALSE	canonical	3	141	junction_2	16.6685332288117	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048593	155065395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155055485_155055829_155059243_155060718_155061128_155061659_155062664_155062849_155064050_155064182_155064252_155064951
ES.25283.29	chr4	+	5388	15	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-1	intron_retention	FALSE	canonical	3	67	junction_11	29.6108260676423	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCTGGTGAGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	155048593	155065390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.3	chr4	+	2575	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	0	-67	0	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048579	155065395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.30	chr4	+	5426	15	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	2	intron_retention	FALSE	canonical	3	67	junction_11	30.3785638708801	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGTGAGAAGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	155048593	155065393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.31	chr4	+	3065	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-1	intron_retention	FALSE	canonical	3	19	junction_8	38.8010630182922	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048593	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155064050_155064182_155064252_155064951
ES.25283.32	chr4	+	5175	16	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-6	intron_retention	FALSE	canonical	3	67	junction_12	29.4094467060425	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCTCATCTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	155048593	155065385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.33	chr4	+	4830	17	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	0	intron_retention	FALSE	canonical	3	19	junction_8	42.4848778243506	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCTGGTGAGAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	155048593	155065391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.34	chr4	+	5423	17	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	1	intron_retention	FALSE	canonical	3	19	junction_8	42.6636554927025	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAGAAGCAGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	155048593	155065396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155059243_155060718_155060832_155061039_155061128_155061659_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.35	chr4	+	4388	14	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_7	51.2196800195176	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCATCTGGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	155048593	155065387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155055485_155055829_155057027_155059086_155059243_155060689_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155064050_155064182_155064252_155064951
ES.25283.36	chr4	+	307	2	Intergenic	novelGene_21088	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTTCCAGCTTTAT	NA	False	NA	NA	False	AGTAAA	-17	NA	155048862	155049762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155048890_155049482
ES.25283.37	chr4	+	2452	19	NNC	ENSMUSG00000029056.14	novel	2042	16	NA	NA	276	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.7453403401077	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCTGGTGAGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	155048865	155065390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048890_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.38	chr4	+	731	1	Intergenic	novelGene_21089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTCCAGCTTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	155049030	155049761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155049000_155049800
ES.25283.39	chr4	+	5218	14	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-766	0	intron_retention	FALSE	canonical	3	67	junction_10	31.335557435018	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155053689	155065395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155054245_155054450_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.4	chr4	+	5635	15	NIC	ENSMUSG00000029056.14	novel	2508	19	NA	NA	0	-2	intron_retention	FALSE	canonical	3	67	junction_11	28.9006037646134	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155048579	155065389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.40	chr4	+	5843	13	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-563	1	intron_retention	FALSE	canonical	3	67	junction_9	36.2950869035099	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155053892	155065392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155054245_155054450_155054635_155054903_155055485_155055829_155056012_155056605_155056688_155056925_155059243_155060718_155061128_155061659_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.41	chr4	+	3912	17	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	-377	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.7005224683126	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155054078	155065395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155058677_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.42	chr4	+	3933	11	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1432	-11	intron_retention	FALSE	canonical	3	19	junction_2	47.9613385968323	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGTGCTCATCTGG	NA	False	NA	NA	False	NA	NA	NA	155055887	155065380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155056012_155056605_155056688_155056886_155059243_155060718_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.43	chr4	+	5733	7	NIC	ENSMUSG00000029056.14	novel	2042	16	NA	NA	1728	-2	intron_retention	FALSE	canonical	3	67	junction_3	41.7149719991383	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155056183	155065389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155059243_155060718_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.44	chr4	+	3403	8	NIC	ENSMUSG00000029056.14	novel	1431	10	NA	NA	-991	-1	intron_retention	FALSE	canonical	3	107	junction_4	29.9353043909627	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155057998	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155059243_155060718_155060832_155061039_155061128_155061659_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.45	chr4	+	3930	5	NIC	ENSMUSG00000029056.14	novel	1532	7	NA	NA	-819	-2	intron_retention	FALSE	canonical	3	145	junction_2	19.0180834996589	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCATCTGGTGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	155059908	155065389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155061128_155061659_155062664_155062849_155064050_155064182_155064252_155064951
ES.25283.5	chr4	+	2604	19	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	37.9167785916134	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTCATCTGGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	155048580	155065386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.6	chr4	+	4837	17	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	67	junction_13	28.5689270668326	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048580	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.7	chr4	+	2539	19	NIC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	31.6079377434698	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGAGAAGCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	155048580	155065394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.8	chr4	+	3372	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	1	1	intron_retention	FALSE	canonical	3	19	junction_8	42.1447497417632	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGGTGAGAAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	155048580	155065392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25283.9	chr4	+	4642	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	3	5	intron_retention	FALSE	canonical	3	19	junction_8	41.4409990394064	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCAGTGTCTAGCAC	NA	False	NA	NA	False	NA	NA	NA	155048582	155065400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ES.25284.1	chr4	-	3274	2	Antisense	novelGene_ENSMUSG00000029056.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8953	False	NA	NA	False	NA	NA	NA	155055103	155051623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_155054245_155054450
ES.25285.1	chr4	-	3779	17	ISM	ENSMUSG00000029055.18	ENSMUST00000105631.9	5053	22	10061	262	-4763	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0.484122918275927	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTACAGTCAAATGGC	945	False	NA	NA	False	CATAAA	-24	NA	155085380	155067833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155069423_155071175_155071474_155073574_155073655_155073876_155074024_155074186_155074272_155074349_155074475_155075145_155075254_155075471_155075655_155075741_155075840_155076989_155077073_155077381_155077481_155080588_155080748_155082909_155083018_155083307_155083480_155084521_155084643_155084904_155085109_155085260
ES.25286.1	chr4	+	176	1	Intergenic	novelGene_21090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCTGGTGAGATGGGT	NA	False	NA	NA	False	NA	NA	NA	155149657	155149833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155149700_155149800
ES.25287.1	chr4	+	1635	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	-18	71	-18	-71	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCATCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	155151454	155156819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ES.25287.2	chr4	+	1107	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	5	576	5	-324	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTCACATAAGCTACT	NA	False	NA	NA	False	TATAAA	-15	NA	155151477	155156314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ES.25287.3	chr4	+	768	3	FSM	ENSMUSG00000029047.14	ENSMUST00000134341.2	651	3	-34	-83	9	83	multi-exon	FALSE	canonical	3	93	junction_1	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCGGAGTTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	155151481	155153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155151632_155152279_155152361_155153119
ES.25287.4	chr4	+	1574	6	NNC	ENSMUSG00000029047.14	novel	1688	6	NA	NA	9	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.7783006499763	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAGAAAA	NA	False	NA	NA	False	NA	NA	NA	155151481	155156799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155111_155155234_155156161
ES.25287.6	chr4	+	3673	4	NIC	ENSMUSG00000029047.14	novel	1688	6	NA	NA	-18	-71	intron_retention	FALSE	canonical	3	86	junction_3	9.62635271879577	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCATCTTGGCC	NA	False	NA	NA	False	NA	NA	NA	155151492	155156819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155151632_155152279_155155020_155155097_155155234_155156161
ES.25287.7	chr4	+	2889	5	NIC	ENSMUSG00000029047.14	novel	1688	6	NA	NA	-13	-91	intron_retention	FALSE	canonical	3	86	junction_4	8.33666600026653	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAGAAAA	NA	False	NA	NA	False	NA	NA	NA	155151497	155156799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155151632_155152279_155152361_155153119_155155020_155155097_155155234_155156161
ES.25288.1	chr4	+	1598	3	ISM	ENSMUSG00000029049.15	ENSMUST00000155775.8	389	5	-175	2352	-163	-2352	5prime_fragment	FALSE	canonical	3	34	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	155170870	155175200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155171139_155171877_155171950_155173942
ES.25288.2	chr4	+	3879	13	ISM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	-134	635	-134	-635	5prime_fragment	TRUE	canonical	3	16	junction_9	6.61385330617149	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATGTAGTCAAGTA	NA	False	NA	NA	False	AATGAA	-13	NA	155170899	155229327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858
ES.25288.3	chr4	+	1680	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	-23	2	-23	-2	multi-exon	FALSE	canonical	3	16	junction_9	6.41927570616156	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTAGCACCTTTTGTG	NA	False	NA	15	True	AATAAA	-16	NA	155171010	155229960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
ES.25288.4	chr4	+	4185	1	NIC	ENSMUSG00000029049.15	novel	1662	10	NA	NA	1	-2321	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	155171046	155175231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155171000_155175200
ES.25288.5	chr4	+	1520	13	NIC	ENSMUSG00000029049.15	novel	1659	14	NA	NA	-5	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	9.1874763794103	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCTGAGTAGCACCTT	NA	False	NA	10	True	AATAAA	-11	NA	155171054	155229955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155171139_155171877_155171950_155173942_155174042_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
ES.25288.6	chr4	+	1483	1	Intergenic	novelGene_21092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTTGAGTACACTAT	NA	False	NA	NA	False	NA	NA	NA	155202603	155204086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155202600_155204100
ES.25288.7	chr4	+	3050	1	NIC	ENSMUSG00000029049.15	novel	1659	14	NA	NA	31761	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTAGCACCTTTT	5228	False	NA	12	True	AATAAA	-13	NA	155226907	155229957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155226900_155230000
ES.25289.1	chr4	-	1361	7	NNC	ENSMUSG00000029048.4	novel	373	3	NA	NA	33	721	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	594.907835999269	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTGTGTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	155170795	155157845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155158565_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.10	chr4	-	1612	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	24	-63	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	682.550349492136	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTACTAAGTGACT	NA	False	NA	-18	True	GATAAA	-14	NA	155170804	155158629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167694_155170661
ES.25289.11	chr4	-	4555	7	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	-125	260	-114	-260	intron_retention	FALSE	canonical	3	376	junction_6	458.230897643923	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACACTTTCCTTTGAT	NA	False	NA	-20	True	TATAAA	-31	NA	155170953	155158826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565
ES.25289.12	chr4	-	1552	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	-10	261	1	-261	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACACTTTCCTTTGA	NA	False	NA	-21	True	TATAAA	-30	NA	155170838	155158827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ES.25289.13	chr4	-	1332	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	2	262	0	-262	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGACACTTTCCTTTG	NA	False	NA	-22	True	TATAAA	-29	NA	155170828	155158828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.14	chr4	-	2010	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	46	-263	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	591.74318754	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGACACTTTCCTTT	NA	False	NA	-23	True	TATAAA	-28	NA	155170782	155158829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160907_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.15	chr4	-	3861	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	27	-265	intron_retention	FALSE	canonical	0	0	junction_6	742.122406794638	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTTGACACTTTCCT	NA	False	NA	-25	True	TATAAA	-26	NA	155170801	155158831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155168537_155170037
ES.25289.16	chr4	-	2896	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	27	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	640.858098209593	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATTTTGACACTTTCC	NA	False	NA	-26	True	TATAAA	-25	NA	155170801	155158832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155168537_155170037
ES.25289.17	chr4	-	1319	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	1	-266	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	577.796580890618	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATTTTGACACTTTCC	NA	False	NA	-26	True	TATAAA	-25	NA	155170827	155158832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160174_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.19	chr4	-	1375	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	25	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	703.057085382206	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	-28	True	TATAAA	-23	NA	155170803	155158834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167663_155170661
ES.25289.2	chr4	-	1605	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	2	-11	0	11	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGAGTCACCTCACTGAA	NA	False	NA	-2	True	ATTAAA	-33	NA	155170828	155158555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.20	chr4	-	4749	6	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	27	268	27	-268	intron_retention	FALSE	canonical	3	1459	junction_1	116.481758228488	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	-28	True	TATAAA	-23	NA	155170801	155158834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123
ES.25289.21	chr4	-	2179	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	79	-270	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	699.471578976529	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACTATTTTGACACT	NA	False	NA	-30	True	TATAAA	-21	NA	155170749	155158836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160907_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ES.25289.22	chr4	-	1295	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	18	-275	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGAGACTATTTTG	NA	False	NA	-35	True	TATAAA	-16	NA	155170810	155158841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ES.25289.23	chr4	-	1447	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-275	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGAGACTATTTTG	NA	False	NA	-35	True	TATAAA	-16	NA	155170828	155158841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
ES.25289.24	chr4	-	4939	6	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	36	-275	intron_retention	FALSE	canonical	3	376	junction_5	500.181806946234	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGAGACTATTTTG	NA	False	NA	-35	True	TATAAA	-16	NA	155170792	155158841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565
ES.25289.25	chr4	-	1320	7	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	27	-275	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	705.310983420316	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGAGACTATTTTG	NA	False	NA	-35	True	TATAAA	-16	NA	155170801	155158841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123_155167212_155167565_155167694_155170661
ES.25289.27	chr4	-	5447	6	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	46	-276	intron_retention	FALSE	canonical	2	4	junction_2	644.20946903938	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTGAGACTATTTT	NA	False	NA	-36	True	TATAAA	-15	NA	155170782	155158842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160907_155161168_155161248_155162950_155163051_155165255_155165361_155167123
ES.25289.28	chr4	-	1456	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	47	-277	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTGAGACTATTT	NA	False	NA	-37	True	TATAAA	-14	NA	155170781	155158843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
ES.25289.3	chr4	-	4644	7	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	46	0	46	0	intron_retention	FALSE	canonical	3	376	junction_6	458.230897643923	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170782	155158566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565
ES.25289.30	chr4	-	939	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	19	638	17	-638	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTTCATGTGTTT	NA	False	NA	17	True	AAGAAA	-35	NA	155170811	155159204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.31	chr4	-	1042	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	33	-647	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTTCAGTGATGTT	NA	False	NA	8	True	AAGAAA	-26	NA	155170795	155159213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
ES.25289.32	chr4	-	1156	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	647	0	-647	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTTCAGTGATGTT	NA	False	NA	8	True	AAGAAA	-26	NA	155170828	155159213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ES.25289.33	chr4	-	3962	7	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	70	658	70	-658	intron_retention	FALSE	canonical	3	376	junction_6	458.230897643923	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCATTGATTTCTTTT	NA	False	NA	-3	True	AAGAAA	-15	NA	155170758	155159224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565
ES.25289.36	chr4	-	926	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	4	-658	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCATTGATTTCTTTT	NA	False	NA	-3	True	AAGAAA	-15	NA	155170824	155159224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ES.25289.38	chr4	-	1127	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	-3	-658	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCATTGATTTCTTTT	NA	False	NA	-3	True	AAGAAA	-15	NA	155170833	155159224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
ES.25289.39	chr4	-	839	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	18	739	16	-739	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAATTTTCTTTTTAA	NA	False	NA	-18	True	CATAAA	-17	NA	155170812	155159305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.4	chr4	-	1698	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170804	155158566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
ES.25289.40	chr4	-	2952	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	75	-740	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	640.333714016467	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGAATTTTCTTTTTA	NA	False	NA	-19	True	CATAAA	-16	NA	155170753	155159306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167772_155168694
ES.25289.41	chr4	-	952	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	80	-742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	667.569089904497	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTTGAATTTTCTTTT	NA	False	NA	-21	True	CATAAA	-14	NA	155170748	155159308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155167588_155167775_155170661
ES.25289.44	chr4	-	1008	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	46	749	46	-749	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGGAAGTTGAATT	NA	False	NA	-28	True	CATAAA	-7	NA	155170782	155159315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ES.25289.45	chr4	-	3810	5	ISM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	842	952	842	-952	intron_retention	FALSE	canonical	3	1481	junction_2	113.884535824668	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAAGTTTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	155169986	155159518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123
ES.25289.5	chr4	-	1770	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	33	0	33	0	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170795	155158566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ES.25289.6	chr4	-	2108	6	NIC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	44	-2	intron_retention	FALSE	canonical	3	1097	junction_5	225.604609881979	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCGTCTACACGAG	NA	False	NA	-15	True	ATTAAA	-20	NA	155170784	155158568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ES.25289.7	chr4	-	1572	7	NNC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCGTCTACACGAG	NA	False	NA	-15	True	ATTAAA	-20	NA	155170814	155158568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
ES.25289.8	chr4	-	1762	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	8	-10	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGTGCAGCCTTCGTC	NA	False	NA	-23	True	ATTAAA	-12	NA	155170820	155158576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
ES.2529.1	chr10	-	635	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAATAGACT	NA	False	NA	-7	True	AATAAA	-22	NA	29575375	29574740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_29574700_29575400
ES.25290.1	chr4	-	176	1	Intergenic	novelGene_21091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	155172810	155172634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155172600_155172800
ES.25291.1	chr4	-	2790	1	Antisense	novelGene_ENSMUSG00000029049.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGATGTATTTAGGGACA	NA	False	NA	NA	False	NA	NA	NA	155179160	155176370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_155176400_155179200
ES.25291.2	chr4	-	2087	2	Antisense	novelGene_ENSMUSG00000029049.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGATGTATTTAGGGAC	NA	False	NA	NA	False	NA	NA	NA	155179160	155176371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_155176817_155177518
ES.25292.1	chr4	-	184	1	Intergenic	novelGene_21093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	155204247	155204063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155204100_155204200
ES.25293.1	chr4	-	6133	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-606	-5	-606	5	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTGCAGCCCCCATGC	NA	False	NA	-16	True	AATAAA	-20	NA	155307655	155238526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.10	chr4	-	4667	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-551	1406	-551	-1406	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTGTGTTGGTGTGCT	NA	False	NA	0	True	ACTAAA	-22	NA	155307600	155239937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.11	chr4	-	3154	7	NNC	ENSMUSG00000029050.16	novel	4521	7	NA	NA	14387	-1408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.4872486561196	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTAAGTGTGTTGGTGTG	NA	False	NA	-2	True	ACTAAA	-20	NA	155292605	155239939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155292524
ES.25293.12	chr4	-	3102	6	NNC	ENSMUSG00000029050.16	novel	4521	7	NA	NA	-7111	-1408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.031994881638	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTAAGTGTGTTGGTGTG	NA	False	NA	-2	True	ACTAAA	-20	NA	155279864	155239939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155279712
ES.25293.13	chr4	-	4543	8	NNC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-1408	intron_retention	FALSE	non_canonical	0	0	junction_1	84.700914386795	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTAAGTGTGTTGGTGTG	NA	False	NA	-2	True	ACTAAA	-20	NA	155307534	155239939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241104_155241159_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.14	chr4	-	4066	6	NNC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-1410	intron_retention	FALSE	non_canonical	0	0	junction_2	95.3758879381996	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTAAGTGTGTTGGTG	NA	False	NA	-4	True	ACTAAA	-18	NA	155307534	155239941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242523_155244279_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.15	chr4	-	4366	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-1410	intron_retention	FALSE	canonical	0	0	junction_1	87.6114147814085	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTAAGTGTGTTGGTG	NA	False	NA	-4	True	ACTAAA	-18	NA	155307534	155239941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.16	chr4	-	4538	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-550	-1411	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTAAGTGTGTTGGT	NA	False	NA	-5	True	ACTAAA	-17	NA	155307599	155239942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
ES.25293.17	chr4	-	4734	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-1411	intron_retention	FALSE	canonical	3	196	junction_5	30.7141661127239	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTAAGTGTGTTGGT	NA	False	NA	-5	True	ACTAAA	-17	NA	155307534	155239942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245414_155306008
ES.25293.18	chr4	-	3818	8	NNC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-479	-1411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	84.700914386795	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTAAGTGTGTTGGT	NA	False	NA	-5	True	ACTAAA	-17	NA	155307528	155239942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008_155306725_155307496
ES.25293.19	chr4	-	3377	7	NNC	ENSMUSG00000029050.16	novel	4521	7	NA	NA	-5300	-1413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.4872486561196	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTAAGTGTGTTG	NA	False	NA	-7	True	ACTAAA	-15	NA	155278053	155239944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155277744
ES.25293.2	chr4	-	5886	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-487	0	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGTGCCTGCAGCCCC	NA	False	NA	-21	True	AATAAA	-15	NA	155307536	155238531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
ES.25293.20	chr4	-	4054	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-526	1994	-526	-1994	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTATGCAAATTGTATA	NA	False	NA	NA	False	NA	NA	NA	155307575	155240525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.21	chr4	-	3558	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-172	-2013	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCGTTTACTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	155307221	155240544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
ES.25293.3	chr4	-	5967	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	-541	96	-541	-96	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTCTCTGTGTACC	NA	False	NA	-7	True	NA	NA	NA	155307590	155238627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.4	chr4	-	5204	6	NIC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	30	-108	intron_retention	FALSE	canonical	3	19	junction_5	92.6809581305675	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATATTTATCTATT	NA	False	NA	-19	True	TATAAA	-40	NA	155306962	155238639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155306008
ES.25293.5	chr4	-	5838	8	NNC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-485	-108	intron_retention	FALSE	non_canonical	0	0	junction_7	84.700914386795	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATATTTATCTATT	NA	False	NA	-19	True	TATAAA	-40	NA	155307534	155238639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008_155306080_155306140
ES.25293.6	chr4	-	4519	7	NNC	ENSMUSG00000029050.16	novel	4521	7	NA	NA	10308	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.4872486561196	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAAAC	NA	False	NA	-48	True	TATAAA	-11	NA	155262445	155238668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155262270
ES.25293.7	chr4	-	5292	7	NNC	ENSMUSG00000029050.16	novel	5522	7	NA	NA	-18	-137	intron_retention	FALSE	canonical	0	0	junction_1	82.7318291563504	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAAAC	NA	False	NA	-48	True	TATAAA	-11	NA	155307010	155238668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242456_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ES.25293.8	chr4	-	4456	7	NNC	ENSMUSG00000029050.16	novel	4521	7	NA	NA	14799	-137	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	91.1293342209607	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAAAC	NA	False	NA	-48	True	TATAAA	-11	NA	155257954	155238668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155257842
ES.25294.1	chr4	+	176	1	Intergenic	novelGene_21094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	155314458	155314634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155314500_155314600
ES.25295.1	chr4	+	179	1	Intergenic	novelGene_21096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGGTTGTTCGG	NA	False	NA	NA	False	NA	NA	NA	155317509	155317688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155317500_155317700
ES.25296.1	chr4	-	3482	1	Intergenic	novelGene_21095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	8287	False	NA	NA	False	NA	NA	NA	155320381	155316899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155316900_155320400
ES.25297.1	chr4	+	1166	4	NNC	ENSMUSG00000073684.14	novel	1479	3	NA	NA	-3007	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.7697348898953	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTTTCCTTCATA	NA	False	NA	4	True	NA	NA	NA	155331251	155341140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155331443_155334962_155335108_155335212_155335494_155340591
ES.25297.2	chr4	+	1224	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	-150	2	14	1	multi-exon	FALSE	canonical	3	113	junction_1	46.5784881201135	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTCCTTCATAGC	NA	False	NA	6	True	NA	NA	NA	155334272	155341142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
ES.25297.3	chr4	+	4902	1	NIC	ENSMUSG00000073684.14	novel	839	4	NA	NA	-7	-1592	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGTCAGACATAGTG	NA	False	NA	NA	False	NA	NA	NA	155334346	155339248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155334300_155339200
ES.25297.4	chr4	+	1007	4	FSM	ENSMUSG00000073684.14	ENSMUST00000105627.8	710	4	1	-298	1	-2	multi-exon	FALSE	canonical	2	17	junction_1	91.7617688485909	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATTTTGTTTCCTTCA	NA	False	NA	2	True	NA	NA	NA	155334446	155341138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155334520_155335001_155335108_155335212_155335494_155340591
ES.25297.5	chr4	+	1494	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	-13	-2	1	-1	multi-exon	FALSE	canonical	3	207	junction_2	4.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTCCTTCATAGCA	NA	False	NA	7	True	NA	NA	NA	155334446	155341143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155335108_155335212_155335494_155340591
ES.25297.8	chr4	+	4101	3	NNC	ENSMUSG00000073684.14	novel	1071	4	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_2	108	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTTTCCTTCATA	NA	False	NA	4	True	NA	NA	NA	155334562	155341140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155335108_155335212_155338220_155340591
ES.25297.9	chr4	+	6461	2	ISM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	110	6	110	-5	intron_retention	FALSE	canonical	3	216	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTATTTTGTTTCCT	NA	False	NA	-1	True	NA	NA	NA	155334569	155341135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155335108_155335212
ES.25298.1	chr4	-	153	1	Intergenic	novelGene_21097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAAATAAATAAATA	5834	False	NA	NA	False	NA	NA	NA	155339913	155339760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155339800_155339900
ES.25299.1	chr4	-	172	1	Intergenic	novelGene_21098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACATGATTGGGGGG	3893	False	NA	NA	False	NA	NA	NA	155341854	155341682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155341700_155341900
ES.253.1	chr1	+	3558	4	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	35259247	35313696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_35259296_35267779_35267844_35301060_35301245_35310434
ES.2530.1	chr10	+	196	1	Intergenic	novelGene_1921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTATGAAATTACCC	NA	False	NA	NA	False	NA	NA	NA	30034796	30034992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30034800_30035000
ES.25300.1	chr4	+	231	1	Intergenic	novelGene_21099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTCCCAACAA	NA	False	NA	NA	False	NA	NA	NA	155372649	155372880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155372600_155372900
ES.25301.1	chr4	-	4328	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-84	-1603	-84	11	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTTATTATTTGTAT	NA	False	NA	0	True	ATTAAA	-19	NA	155445902	155344574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.11	chr4	-	2298	18	NNC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-36	26	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_16	49.1238108143834	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGCTTCCTCTGATGCC	NA	False	NA	-10	True	AATAAA	-15	NA	155445854	155346530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440948_155441937_155442060_155445608
ES.25301.12	chr4	-	2515	18	NNC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-21	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	49.3868985050148	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGCTTCCTCTGATGCC	NA	False	NA	-10	True	AATAAA	-15	NA	155445839	155346530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445402
ES.25301.13	chr4	-	2232	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-34	26	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGCTTCCTCTGATGCC	NA	False	NA	-10	True	AATAAA	-15	NA	155445852	155346530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
ES.25301.14	chr4	-	2153	16	ISM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-30	5565	-30	3847	5prime_fragment	FALSE	canonical	3	142	junction_12	27.3232501727009	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGGACTGTTTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	155445848	155351742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.15	chr4	-	1388	11	NNC	ENSMUSG00000029053.17	novel	837	5	NA	NA	-28	5975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5585556789957	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTGGTTGTGAGCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	155445846	155368983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155369231_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.16	chr4	-	6653	1	NIC	ENSMUSG00000029053.17	novel	4083	15	NA	NA	2026	1785	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155383602	155376949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155376900_155383600
ES.25301.17	chr4	-	1454	7	NNC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-42	1785	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	73.6329108181631	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155445860	155376949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440948_155441937_155442060_155445608
ES.25301.18	chr4	-	268	1	Intergenic	novelGene_21100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTAGCTCCCCTCCAC	3385	False	NA	NA	False	NA	NA	NA	155394684	155394416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155394400_155394700
ES.25301.19	chr4	-	3012	3	Intergenic	novelGene_21101	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTCACCTCTAAGAAA	376	False	NA	NA	False	NA	NA	NA	155414505	155411223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155412856_155412922_155413121_155413323
ES.25301.2	chr4	-	4185	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-35	7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCTGTTATTATTT	NA	False	NA	-4	True	ATTAAA	-15	NA	155445853	155344578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
ES.25301.20	chr4	-	8435	1	Genic_Genomic	ENSMUSG00000029053.17	novel	NA	NA	NA	NA	-1714	17082	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTAGTCCTTGGCCAC	NA	False	NA	NA	False	NA	NA	NA	155431943	155423508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_155423500_155431900
ES.25301.21	chr4	-	575	4	ISM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-61	92892	-61	1521	5prime_fragment	FALSE	canonical	3	200	junction_1	19.2584757675391	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGAGTGTTTTGCCTGT	NA	False	NA	-1	True	ATTAAA	-25	NA	155445879	155439069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.22	chr4	-	417	4	NNC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	47	1518	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	102.920681433163	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATGAGTGTTTTGCC	NA	False	NA	-4	True	ATTAAA	-22	NA	155445750	155439072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155439162_155440883_155440948_155441937_155442060_155445608
ES.25301.23	chr4	-	586	1	Genic_Genomic	ENSMUSG00000029053.17	novel	NA	NA	NA	NA	-31	-4673	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAACAACAAACCCAACA	NA	False	NA	NA	False	NA	NA	NA	155445849	155445263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_155445300_155445800
ES.25301.3	chr4	-	4061	16	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-31	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.8329925178342	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTCCTGTTATTATTT	NA	False	NA	-4	True	ATTAAA	-15	NA	155445849	155344578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
ES.25301.5	chr4	-	2254	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-76	36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	53.6137444481357	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGATGCCTTTTTTCTGT	NA	False	NA	0	True	AATAAA	-25	NA	155445894	155346520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.6	chr4	-	2373	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	-76	344	-76	35	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGATGCCTTTTTTCTG	NA	False	NA	-1	True	AATAAA	-24	NA	155445894	155346521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.7	chr4	-	2148	15	FSM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	-7	1942	-7	29	multi-exon	FALSE	canonical	1	1	junction_14	50.8262847795291	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCTCTGATGCCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	155430236	155346527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155429906
ES.25301.8	chr4	-	2335	18	NNC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	-77	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.3642785477288	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCTCTGATGCCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	155445895	155346527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155346989_155347158_155347242_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ES.25301.9	chr4	-	1223	9	NNC	ENSMUSG00000029053.17	novel	4083	15	NA	NA	11481	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.5979321016815	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCTCTGATGCCTTT	NA	False	NA	-7	True	AATAAA	-18	NA	155374147	155346527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155346989_155347158_155347252_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087
ES.25302.1	chr4	+	176	1	Intergenic	novelGene_21102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	155447883	155448059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155447900_155448100
ES.25303.1	chr4	+	160	1	Intergenic	novelGene_21103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATGTATATATTA	NA	False	NA	NA	False	AATAAA	-6	NA	155448278	155448438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155448300_155448400
ES.25304.1	chr4	-	174	1	Intergenic	novelGene_21104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	155457921	155457747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155457700_155457900
ES.25305.1	chr4	-	233	1	Intergenic	novelGene_21105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAAGGTGCTCCAGGGC	4469	False	NA	NA	False	NA	NA	NA	155486757	155486524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155486500_155486800
ES.25306.1	chr4	+	2347	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	17	1	17	-1	multi-exon	FALSE	canonical	2	6	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTTGCG	2349	False	NA	NA	False	NA	NA	NA	155493731	155506448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ES.25307.1	chr4	-	1604	3	NIC	ENSMUSG00000084803.9	novel	2757	5	NA	NA	5	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTGCCTCAAATATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	155506147	155492766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155494155_155499177_155499336_155506089
ES.25308.1	chr4	+	179	1	Intergenic	novelGene_21106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGAAGATTTC	1150	False	NA	NA	False	NA	NA	NA	155523757	155523936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155523800_155523900
ES.25309.1	chr4	+	901	4	ISM	ENSMUSG00000023153.10	ENSMUST00000178238.8	968	5	155	4	122	-3	3prime_fragment	FALSE	canonical	1	1	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCGGTCTTTGCGGAA	299	False	NA	NA	False	AATAAA	-14	NA	155553725	155555311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155553804_155553900_155553961_155554445_155554625_155554727
ES.2531.1	chr10	+	2335	1	Intergenic	novelGene_1922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30058016	30060351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30058000_30060400
ES.25310.1	chr4	+	1605	12	NNC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	-9787	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1447.1921459979	2365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	2199	False	NA	8	True	AATAAA	-18	NA	155566030	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155566135_155566897_155566981_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.10	chr4	+	3238	11	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_10	1201.40280089569	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	25	True	AATAAA	-17	NA	155575766	155643724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
ES.25310.100	chr4	+	7848	4	NIC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	4874	-3	intron_retention	FALSE	canonical	3	731	junction_3	1381.4471478208	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	1705	False	NA	22	True	AATAAA	-14	NA	155632258	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.101	chr4	+	2930	3	ISM	ENSMUSG00000029064.16	ENSMUST00000176308.2	812	4	989	-1612	989	-2	3prime_fragment	FALSE	canonical	3	3030	junction_2	300	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTCTGGTGTGATGGTT	85	False	NA	23	True	AATAAA	-15	NA	155638669	155643722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155639689_155641627_155641744_155641927
ES.25310.102	chr4	+	3054	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9508	False	NA	34	True	AATAAA	-20	NA	155648092	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
ES.25310.103	chr4	+	3199	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	-47	0	-47	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTAACAGCTTTCTTC	9525	False	NA	38	True	AATAAA	-24	NA	155648109	155675458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.108	chr4	+	1905	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	105	1142	-21	239	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCTTTTAACTGCAG	9677	False	NA	13	True	AATAAA	-13	NA	155648261	155674316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.109	chr4	+	3677	11	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	106	4	-20	0	intron_retention	FALSE	canonical	3	675	junction_7	31.7464958696232	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9678	False	NA	34	True	AATAAA	-20	NA	155648262	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066
ES.25310.11	chr4	+	3115	13	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1191.61012394994	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	NA	False	NA	25	True	AATAAA	-17	NA	155575787	155643724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927_155642360_155642412
ES.25310.110	chr4	+	3851	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-14	-8	intron_retention	FALSE	canonical	3	675	junction_7	33.42801368262	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9684	False	NA	26	True	AATAAA	-12	NA	155648268	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155672242_155672317_155672476_155673066
ES.25310.111	chr4	+	3293	12	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-14	-8	intron_retention	FALSE	canonical	2	5	junction_1	208.386640012111	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9684	False	NA	26	True	AATAAA	-12	NA	155648268	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661184_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.112	chr4	+	8011	7	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-13	-3	intron_retention	FALSE	canonical	0	0	junction_6	276.182709250396	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAGTTAAGTAACAGC	9685	False	NA	31	True	AATAAA	-17	NA	155648269	155675451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155673066
ES.25310.113	chr4	+	1975	3	NNC	ENSMUSG00000029063.17	novel	408	4	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	360.5	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATTGAGTTAAGT	9687	False	NA	25	True	AATAAA	-11	NA	155648271	155675445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661627_155673812
ES.25310.114	chr4	+	2828	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9687	False	NA	34	True	AATAAA	-20	NA	155648271	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.115	chr4	+	4515	8	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	115	12	-11	-8	intron_retention	FALSE	canonical	3	675	junction_7	35.8318066436363	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9687	False	NA	26	True	AATAAA	-12	NA	155648271	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813
ES.25310.116	chr4	+	1735	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-11	237	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTTCTTTTAACTGC	9687	False	NA	11	True	AATAAA	-11	NA	155648271	155674314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
ES.25310.117	chr4	+	3814	9	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	678	junction_6	32.7414110874898	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9687	False	NA	26	True	AATAAA	-12	NA	155648271	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155672476_155673066_155673150_155673784
ES.25310.119	chr4	+	6637	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-8	242	intron_retention	FALSE	canonical	3	675	junction_6	33.6661551116251	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTTAACTGCAGTGC	9690	False	NA	16	True	AATAAA	-16	NA	155648274	155674319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.12	chr4	+	1192	6	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-29	158	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1431.66621808297	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAACCCTGAGTGTGAT	NA	False	NA	3	True	AATAAA	-13	NA	155575788	155642268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.121	chr4	+	4445	8	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	678	junction_6	31.8363160621351	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9691	False	NA	26	True	AATAAA	-12	NA	155648275	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155672476_155673066
ES.25310.122	chr4	+	1686	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	239	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTCTTTTAACTGCAG	9691	False	NA	13	True	AATAAA	-13	NA	155648275	155674316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.123	chr4	+	1597	11	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	280.375623048795	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9691	False	NA	26	True	AATAAA	-12	NA	155648275	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155675050
ES.25310.124	chr4	+	3686	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	675	junction_7	33.8362067745321	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9693	False	NA	26	True	AATAAA	-12	NA	155648277	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155673150_155673784
ES.25310.125	chr4	+	3091	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	675	junction_7	32.7713289324678	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9697	False	NA	26	True	AATAAA	-12	NA	155648281	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672476_155673066_155673150_155673784
ES.25310.126	chr4	+	3444	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	-8	intron_retention	FALSE	canonical	3	33	junction_1	218.986611011882	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9698	False	NA	26	True	AATAAA	-12	NA	155648282	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066
ES.25310.127	chr4	+	9530	7	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	276.182709250396	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9698	False	NA	34	True	AATAAA	-20	NA	155648282	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155667681_155667929_155668724_155669608_155669718_155669820_155669907_155671185
ES.25310.128	chr4	+	4299	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	675	junction_6	30.5163890393343	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9700	False	NA	34	True	AATAAA	-20	NA	155648284	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.129	chr4	+	3611	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	675	junction_7	32.8974163119233	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9700	False	NA	34	True	AATAAA	-20	NA	155648284	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155673150_155673784
ES.25310.13	chr4	+	4897	9	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	1867	junction_1	654.431241613663	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGGTGTGATGGTTA	NA	False	NA	24	True	AATAAA	-16	NA	155575788	155643723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627
ES.25310.130	chr4	+	1739	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	206.229111138539	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9707	False	NA	26	True	AATAAA	-12	NA	155648291	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155675050
ES.25310.131	chr4	+	4307	9	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	135	12	-7	-8	intron_retention	FALSE	canonical	3	675	junction_7	33.5475408934843	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9707	False	NA	26	True	AATAAA	-12	NA	155648291	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141
ES.25310.134	chr4	+	3529	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	678	junction_6	30.0293190065975	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9708	False	NA	26	True	AATAAA	-12	NA	155648292	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.135	chr4	+	3067	13	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	268.86524660754	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9708	False	NA	34	True	AATAAA	-20	NA	155648292	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661184_155661240_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.137	chr4	+	2990	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	209.238801451972	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9715	False	NA	26	True	AATAAA	-12	NA	155648299	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661456_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.138	chr4	+	2642	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	284.418488399066	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9715	False	NA	34	True	AATAAA	-20	NA	155648299	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
ES.25310.142	chr4	+	1878	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	7	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	207.737596719778	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTTCTTTTAACTGCA	9721	False	NA	12	True	AATAAA	-12	NA	155648305	155674315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669736_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.145	chr4	+	4332	9	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	14	-8	intron_retention	FALSE	canonical	3	678	junction_6	30.2974833938398	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9728	False	NA	26	True	AATAAA	-12	NA	155648312	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155672242_155672317_155672476_155673066
ES.25310.146	chr4	+	1701	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	17	228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	210.495558540529	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGCCAGAAATCTTCT	9731	False	NA	2	True	AATAAA	-2	NA	155648315	155674305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673923
ES.25310.147	chr4	+	1804	11	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	26	251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	220.365174199555	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCAGTGCTTTTCCACA	9740	False	NA	25	True	AATAAA	-25	NA	155648324	155674328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672509_155673784
ES.25310.148	chr4	+	3712	11	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	26	-8	intron_retention	FALSE	canonical	1	2	junction_8	218.942206986227	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9740	False	NA	26	True	AATAAA	-12	NA	155648324	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155672059_155672141_155672242_155672317_155672476_155673066
ES.25310.149	chr4	+	2699	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	228.772570228358	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9763	False	NA	34	True	AATAAA	-20	NA	155648347	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155673066_155673150_155673784
ES.25310.15	chr4	+	3265	10	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-29	165	intron_retention	FALSE	canonical	3	1867	junction_1	637.798547861565	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	NA	False	NA	10	True	AATAAA	-20	NA	155575788	155642275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.150	chr4	+	2923	12	NIC	ENSMUSG00000029063.17	novel	671	5	NA	NA	35	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	208.954738267951	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	9979	False	NA	26	True	AATAAA	-12	NA	155648563	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155648627_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.151	chr4	+	4852	8	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	18790	13	-5	-9	intron_retention	FALSE	canonical	3	675	junction_4	36.6956595331305	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATTGAGTTAAGT	NA	False	NA	25	True	AATAAA	-11	NA	155666946	155675445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066
ES.25310.152	chr4	+	4972	6	NIC	ENSMUSG00000029063.17	novel	2737	10	NA	NA	140	-8	intron_retention	FALSE	canonical	3	675	junction_4	41.8310889172156	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	NA	False	NA	26	True	AATAAA	-12	NA	155667091	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155672476_155673066
ES.25310.153	chr4	+	5869	3	NIC	ENSMUSG00000029063.17	novel	2737	10	NA	NA	461	-9	intron_retention	FALSE	canonical	3	678	junction_2	42.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATTGAGTTAAGT	NA	False	NA	25	True	AATAAA	-11	NA	155667412	155675445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155668724_155669608_155669907_155671185
ES.25310.154	chr4	+	4868	3	NIC	ENSMUSG00000029063.17	novel	2737	10	NA	NA	-1322	-8	intron_retention	FALSE	canonical	3	699	junction_2	23	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	241	False	NA	26	True	AATAAA	-12	NA	155669911	155675446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155672242_155672317_155672476_155673066
ES.25310.155	chr4	+	5335	2	NIC	ENSMUSG00000029063.17	novel	2946	12	NA	NA	-1190	0	intron_retention	FALSE	canonical	3	745	junction_1	0	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	373	False	NA	34	True	AATAAA	-20	NA	155670043	155675454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155672242_155672317
ES.25310.18	chr4	+	1567	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	-24	158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1164.87785334907	2363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAACCCTGAGTGTGAT	NA	False	NA	3	True	AATAAA	-13	NA	155575793	155642268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155575910_155575999_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.19	chr4	+	4759	11	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	-24	1	intron_retention	FALSE	canonical	3	1763	junction_1	813.751245774776	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575793	155643725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.2	chr4	+	3229	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-97	-1	-88	1	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTGATGGTTATTTG	NA	False	NA	28	True	AATAAA	-20	NA	155575729	155643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.20	chr4	+	4711	10	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	1867	junction_1	637.798547861565	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575793	155643726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.21	chr4	+	1747	12	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	-20	158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1371.81109703574	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAACCCTGAGTGTGAT	NA	False	NA	3	True	AATAAA	-13	NA	155575797	155642268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576057_155600064_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.22	chr4	+	3256	12	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_11	1228.25489318978	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575798	155643725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
ES.25310.24	chr4	+	3292	10	ISM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-20	0	-17	0	intron_retention	FALSE	canonical	3	1867	junction_1	619.886269935317	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575800	155643726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627
ES.25310.25	chr4	+	3446	11	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	-13	313	intron_retention	FALSE	canonical	3	1763	junction_1	813.751245774776	2369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAAGCATTCTTTCTT	NA	False	NA	30	True	AATATA	-18	NA	155575804	155642423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.26	chr4	+	1793	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-12	1307	-9	309	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTGGAAGCATTCTT	NA	False	NA	26	True	AATATA	-14	NA	155575808	155642419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.27	chr4	+	2001	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	-9	1151	-9	465	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGATGACTGTTTCGC	NA	False	NA	NA	False	NA	NA	NA	155575808	155642575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.3	chr4	+	3172	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-84	0	-81	0	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575736	155643726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.30	chr4	+	1873	11	ISM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	-4	1455	-4	161	intron_retention	FALSE	canonical	3	1763	junction_1	817.368099450914	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGAGTGTGATTGT	NA	False	NA	6	True	AATAAA	-16	NA	155575813	155642271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627
ES.25310.37	chr4	+	3125	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1212.42652669951	2392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575821	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625018_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.38	chr4	+	1614	10	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	1	156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1266.69763120047	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTAACCCTGAGTGTG	NA	False	NA	1	True	AATAAA	-11	NA	155575821	155642266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611983_155619804_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.39	chr4	+	3378	10	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	1	311	intron_retention	FALSE	canonical	3	1867	junction_1	637.798547861565	2369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGAAGCATTCTTTC	NA	False	NA	28	True	AATATA	-16	NA	155575821	155642421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.4	chr4	+	1766	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-87	1452	-78	164	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTGTGATTGTGAG	NA	False	NA	9	True	AATAAA	-19	NA	155575739	155642274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.41	chr4	+	1511	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	4	1573	-2	43	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATTGTTTTTGGTTTAT	NA	False	NA	0	True	ACTAAA	-22	NA	155575824	155642153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.42	chr4	+	2508	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-2	625	-2	-623	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGCGGCTTTGTCCA	NA	False	NA	NA	False	AAGAAA	-18	NA	155575824	155643101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.43	chr4	+	1598	11	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	3	163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1213.08146470054	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	NA	False	NA	8	True	AATAAA	-18	NA	155575829	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639653_155641619_155641744_155641927
ES.25310.44	chr4	+	2976	10	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1193.20077889911	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575830	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.45	chr4	+	1770	12	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	5	162	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_11	1228.25489318978	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTGAGTGTGATTGTG	NA	False	NA	7	True	AATAAA	-17	NA	155575831	155642272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
ES.25310.46	chr4	+	1719	11	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	8	163	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_10	1201.40280089569	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	NA	False	NA	8	True	AATAAA	-18	NA	155575834	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
ES.25310.47	chr4	+	1552	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	9	1570	9	46	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTTTGGTTTATTTT	NA	False	NA	3	True	ACTAAA	-25	NA	155575835	155642156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.48	chr4	+	3911	10	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	9	-756	intron_retention	FALSE	canonical	3	1867	junction_1	637.798547861565	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTTGATTGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	155575835	155642968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.49	chr4	+	2990	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1164.87785334907	2392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575835	155643725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155575867_155575948_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.5	chr4	+	1714	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	-78	1452	-75	164	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTGTGATTGTGAG	NA	False	NA	9	True	AATAAA	-19	NA	155575742	155642274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.51	chr4	+	1576	13	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	9	163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1191.61012394994	2364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	NA	False	NA	8	True	AATAAA	-18	NA	155575835	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155575894_155575986_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.53	chr4	+	4126	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	15	-1010	15	1010	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACACACATTTTGCAAG	NA	False	NA	NA	False	AATAAA	-10	NA	155575841	155644736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.57	chr4	+	3055	11	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1394.01918566424	2392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575847	155643725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625020_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.58	chr4	+	3242	12	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1389.53179581118	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGACTCTGGTGTGATGG	NA	False	NA	21	True	AATAAA	-13	NA	155575854	155643720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637632_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.6	chr4	+	3394	11	ISM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	-71	1	-71	1	intron_retention	FALSE	canonical	3	1763	junction_1	817.368099450914	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGTGTGATGGTTATT	NA	False	NA	26	True	AATAAA	-18	NA	155575746	155643725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627
ES.25310.62	chr4	+	3040	10	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1266.69763120047	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575863	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611971_155619779_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.65	chr4	+	5499	11	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	38	-3	intron_retention	FALSE	canonical	3	1763	junction_1	802.912629119757	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575864	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.67	chr4	+	3043	11	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1220.54686104221	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGACTCTGGTGTGATG	NA	False	NA	20	True	AATAAA	-12	NA	155575865	155643719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641920
ES.25310.71	chr4	+	1770	10	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	39	163	intron_retention	FALSE	non_canonical	0	0	junction_8	1275.30854170401	2364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	NA	False	NA	8	True	AATAAA	-18	NA	155575865	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639475_155639689_155641627
ES.25310.73	chr4	+	2295	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	45	748	39	-746	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGCCATATTGGGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	155575865	155642978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.74	chr4	+	4119	21	Fusion	ENSMUSG00000029063.17_ENSMUSG00000029064.16	novel	3143	12	NA	NA	39	3	multi-exon	FALSE	canonical	0	0	junction_10	1514.00963999573	3061	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAACAGCTTTCTTCTGG	NA	False	NA	41	True	AATAAA	-27	NA	155575865	155675461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ES.25310.77	chr4	+	2564	6	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	43	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1431.66621808297	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575869	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.79	chr4	+	3143	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	46	-3	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_5	1205.94912382579	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575872	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619985_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.80	chr4	+	3223	11	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	46	158	intron_retention	FALSE	canonical	3	1763	junction_1	813.751245774776	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAACCCTGAGTGTGAT	NA	False	NA	3	True	AATAAA	-13	NA	155575872	155642268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.84	chr4	+	1634	12	NNC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	50	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1491.38439762779	2363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGAAGGTAACCCTGAG	NA	False	NA	-3	True	AATAAA	-7	NA	155575876	155642262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600064_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641735_155641924
ES.25310.86	chr4	+	2384	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	79	625	73	-623	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGCGGCTTTGTCCA	NA	False	NA	NA	False	AAGAAA	-18	NA	155575899	155643101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.87	chr4	+	3018	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	103	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1231.82344178682	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155575929	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639693_155641636_155641744_155641927
ES.25310.88	chr4	+	3002	12	NNC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	-691	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1175.08965017586	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	False	NA	22	True	AATAAA	-14	NA	155576674	155643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155576762_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.89	chr4	+	3417	12	NNC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	-660	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1175.08965017586	2392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155576705	155643726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155577203_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.9	chr4	+	1890	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	-63	1304	-54	312	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	2369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAAGCATTCTTTCT	NA	False	NA	29	True	AATATA	-17	NA	155575763	155642422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.90	chr4	+	1928	12	NNC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	-629	158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1175.08965017586	2363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAACCCTGAGTGTGAT	NA	False	NA	3	True	AATAAA	-13	NA	155576736	155642268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155577203_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.91	chr4	+	3266	12	NNC	ENSMUSG00000029064.16	novel	2832	10	NA	NA	-9099	310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1371.81109703574	2368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGAAGCATTCTTT	8076	False	NA	27	True	AATATA	-15	NA	155597819	155642420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155599469_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.93	chr4	+	2872	10	FSM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	-42	2	-42	-2	multi-exon	FALSE	canonical	3	731	junction_9	969.739191105233	2391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTCTGGTGTGATGGTT	2337	False	NA	23	True	AATAAA	-15	NA	155611867	155643722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ES.25310.94	chr4	+	1566	10	ISM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	36041	1307	-42	309	3prime_fragment	FALSE	canonical	3	3030	junction_9	281.031433591808	2368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTGGAAGCATTCTT	2337	False	NA	26	True	AATATA	-14	NA	155611867	155642419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.95	chr4	+	1420	10	ISM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	36041	1453	-42	163	3prime_fragment	FALSE	canonical	3	3030	junction_9	281.031433591808	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTGTGATTGTGA	2337	False	NA	8	True	AATAAA	-18	NA	155611867	155642273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.96	chr4	+	1328	7	ISM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	49180	1306	-2378	310	3prime_fragment	FALSE	canonical	3	3030	junction_6	318.904592141425	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGAAGCATTCTTT	34	False	NA	27	True	AATATA	-15	NA	155625006	155642420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.97	chr4	+	3128	6	ISM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	49641	1456	-1917	160	3prime_fragment	FALSE	canonical	3	3030	junction_5	330.700105836088	2358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	232	False	NA	5	True	AATAAA	-15	NA	155625467	155642270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.98	chr4	+	6103	5	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-1846	-4	intron_retention	FALSE	canonical	3	3030	junction_4	364.789922421111	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGACTCTGGTGTGATGG	0	True	NA	21	True	AATAAA	-13	NA	155625538	155643720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25310.99	chr4	+	2849	5	NIC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	-37	165	intron_retention	FALSE	canonical	3	3030	junction_4	364.789922421111	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGTGTGATTGTGAGA	531	False	NA	10	True	AATAAA	-20	NA	155627347	155642275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
ES.25311.1	chr4	-	1407	1	Intergenic	novelGene_21107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGTCATAAAAGGAGGAA	5447	False	NA	NA	False	NA	NA	NA	155596369	155594962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155595000_155596400
ES.25312.1	chr4	-	206	1	Intergenic	novelGene_21108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTTCACTCAA	NA	False	NA	NA	False	NA	NA	NA	155635428	155635222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155635200_155635400
ES.25313.1	chr4	-	5240	2	Antisense	novelGene_ENSMUSG00000029063.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGCCAGGGACAAAAAAA	7191	False	NA	NA	False	NA	NA	NA	155647823	155642540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_155647593_155647635
ES.25314.1	chr4	+	5820	8	NNC	ENSMUSG00000042202.16	novel	6291	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.45325569185462	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCAGTAGCCTCCTC	NA	False	NA	12	True	AATAAA	-17	NA	155685867	155707795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686196_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155702071_155702218_155702968_155705556_155705902
ES.25314.10	chr4	+	3340	7	NIC	ENSMUSG00000042202.16	novel	6291	9	NA	NA	-243	-236	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	4.6785562825394	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATGTCTACATTTTAT	73	False	NA	NA	False	AAAAAG	-23	NA	155694416	155704311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155694777_155694957_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
ES.25314.11	chr4	+	2010	5	NIC	ENSMUSG00000042202.16	novel	6291	9	NA	NA	1433	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCAGACGTTGGATTA	1603	False	NA	NA	False	AATAAA	-16	NA	155696092	155704549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155696201_155697073_155697195_155700025_155700080_155702071_155702218_155702968
ES.25314.12	chr4	+	4974	2	ISM	ENSMUSG00000042202.16	ENSMUST00000105608.9	6291	9	16198	2	7411	-2	3prime_fragment	FALSE	canonical	3	9	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCAGTAGCCTCCTC	7581	False	NA	12	True	AATAAA	-17	NA	155702070	155707795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155702218_155702968
ES.25314.13	chr4	+	4283	3	NNC	ENSMUSG00000042202.16	novel	6291	9	NA	NA	7438	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCTGCAGTAGCCTCC	7608	False	NA	10	True	AATAAA	-15	NA	155702097	155707793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155702218_155703185_155706364_155706808
ES.25314.14	chr4	+	3526	3	NNC	ENSMUSG00000042202.16	novel	654	4	NA	NA	8808	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCAGTAGCCTCCTC	8978	False	NA	12	True	AATAAA	-17	NA	155703467	155707795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155705556_155705902_155706355_155706809
ES.25314.2	chr4	+	5743	10	NNC	ENSMUSG00000042202.16	novel	6291	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6.27162924074226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGTAGCCTCCTCAT	NA	False	NA	14	True	AATAAA	-19	NA	155686073	155707797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686196_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968_155705552_155705898
ES.25314.3	chr4	+	3545	9	FSM	ENSMUSG00000042202.16	ENSMUST00000118607.2	2166	9	-280	-1099	53	328	multi-exon	FALSE	canonical	2	8	junction_6	4.43705983732471	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTAAAGCTGCTTTG	NA	False	NA	NA	False	AAAACA	-20	NA	155686120	155704875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
ES.25314.4	chr4	+	3022	9	FSM	ENSMUSG00000042202.16	ENSMUST00000118607.2	2166	9	-80	-776	-80	5	multi-exon	FALSE	canonical	2	8	junction_6	4.43705983732471	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGACGTTGGATTAATC	NA	False	NA	NA	False	AATAAA	-19	NA	155686320	155704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968
ES.25314.5	chr4	+	5745	10	NNC	ENSMUSG00000042202.16	novel	2166	9	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.90249999346374	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCAGTAGCCTCCTC	NA	False	NA	12	True	AATAAA	-17	NA	155686350	155707795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968_155705482_155705971
ES.25314.6	chr4	+	5891	10	NNC	ENSMUSG00000042202.16	novel	2166	9	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.90249999346374	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGTAGCCTCCTCAT	NA	False	NA	14	True	AATAAA	-19	NA	155686353	155707797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968_155705556_155705898
ES.25314.8	chr4	+	5418	11	NNC	ENSMUSG00000042202.16	novel	2166	9	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6.62117814289874	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTGCAGTAGCCTCCT	NA	False	NA	11	True	AATAAA	-16	NA	155686373	155707794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968_155705552_155705898_155706363_155706808
ES.25314.9	chr4	+	5701	10	NNC	ENSMUSG00000042202.16	novel	2166	9	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.90249999346374	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGCCTCCTCATTCTTT	NA	False	NA	19	True	AATAAA	-24	NA	155686395	155707802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155686620_155694295_155694777_155694957_155695094_155696072_155696201_155697073_155697195_155700025_155700080_155700639_155700713_155702071_155702218_155702968_155705490_155705985
ES.25315.1	chr4	-	3931	3	FSM	ENSMUSG00000086682.2	ENSMUST00000137752.2	2490	3	230	-1671	-45	1671	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGATTACAGTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	155708982	155691085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155694749_155694870_155694972_155708815
ES.25315.2	chr4	-	4582	1	NIC	ENSMUSG00000073682.4	novel	237	3	NA	NA	26379	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAAGAGACGAGAAA	1484	False	NA	NA	False	NA	NA	NA	155703486	155698904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155698900_155703500
ES.25315.3	chr4	-	2489	1	Genic_Genomic	ENSMUSG00000086682.2	novel	NA	NA	NA	NA	-2	-6248	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155709214	155706725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_155706700_155709200
ES.25316.1	chr4	+	2691	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	-91	-5	-76	5	multi-exon	TRUE	canonical	3	247	junction_2	74.7943440763884	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGCCTCGTAAGAAAG	3871	False	NA	28	True	ATTAAA	-33	NA	155709234	155734400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.10	chr4	+	3310	19	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	5	-3	intron_retention	FALSE	canonical	3	183	junction_1	83.3520904816089	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3952	False	NA	20	True	ATTAAA	-25	NA	155709315	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.12	chr4	+	2796	22	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	155.880092297263	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3957	False	NA	17	True	ATTAAA	-22	NA	155709320	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.13	chr4	+	2366	18	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	159.040157275757	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3957	False	NA	17	True	ATTAAA	-22	NA	155709320	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.14	chr4	+	2620	21	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.074817609301	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3957	False	NA	17	True	ATTAAA	-22	NA	155709320	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710112_155710204_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.15	chr4	+	2613	20	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	165.438324868152	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3959	False	NA	20	True	ATTAAA	-25	NA	155709322	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.17	chr4	+	3261	15	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	7	junction_11	137.277705281473	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3960	False	NA	20	True	ATTAAA	-25	NA	155709323	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732425_155732739_155733618_155733878_155734069_155734148
ES.25316.18	chr4	+	2772	22	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	161.918108693569	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3960	False	NA	17	True	ATTAAA	-22	NA	155709323	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709641_155709797_155709987_155710112_155710204_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.2	chr4	+	2654	19	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-22	-6	intron_retention	FALSE	canonical	2	7	junction_11	129.882663095732	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3925	False	NA	17	True	ATTAAA	-22	NA	155709288	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.20	chr4	+	2442	19	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-5	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	125.94884323054	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAAGTGTCTAACTTG	3968	False	NA	15	True	ATTAAA	-20	NA	155709331	155734387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.21	chr4	+	3034	18	NIC	ENSMUSG00000029062.15	novel	3170	19	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	11	junction_4	126.161208455813	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3969	False	NA	17	True	ATTAAA	-22	NA	155709332	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.23	chr4	+	2557	19	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	-6	intron_retention	FALSE	canonical	3	11	junction_5	129.707565196236	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3976	False	NA	17	True	ATTAAA	-22	NA	155709339	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.24	chr4	+	2905	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_15	164.590127285934	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGTGTCTAACTTGC	3977	False	NA	16	True	ATTAAA	-21	NA	155709340	155734388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732681_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.26	chr4	+	3457	21	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	6	-10	intron_retention	FALSE	canonical	0	0	junction_4	176.029791512687	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	3982	False	NA	13	True	ATTAAA	-18	NA	155709345	155734385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155715938_155715999_155716862_155716987_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.28	chr4	+	2724	21	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	136.859882726824	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3985	False	NA	20	True	ATTAAA	-25	NA	155709348	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.29	chr4	+	2801	21	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-6	intron_retention	FALSE	canonical	0	0	junction_5	153.971783129247	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155715938_155716056_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.30	chr4	+	2340	18	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	122.475956259144	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155733468_155733618_155733878_155734069_155734148
ES.25316.31	chr4	+	2458	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	175.066967796031	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724056_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733902_155734069_155734148
ES.25316.32	chr4	+	2474	19	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	124.44275792508	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.33	chr4	+	2688	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-7	intron_retention	FALSE	canonical	3	49	junction_9	137.762893982555	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGTGTCTAACTTGC	3986	False	NA	16	True	ATTAAA	-21	NA	155709349	155734388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878
ES.25316.34	chr4	+	4182	17	NIC	ENSMUSG00000029062.15	novel	3170	19	NA	NA	10	-6	intron_retention	FALSE	canonical	2	7	junction_9	123.240047772629	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3986	False	NA	17	True	ATTAAA	-22	NA	155709349	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.35	chr4	+	2639	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	10	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	148.539514944677	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	3986	False	NA	13	True	ATTAAA	-18	NA	155709349	155734385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.36	chr4	+	2767	21	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.199167773993	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3987	False	NA	17	True	ATTAAA	-22	NA	155709350	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155715100_155715304_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.37	chr4	+	2409	19	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	149.324497506456	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGAAAGAAGTGTCTAAC	3997	False	NA	12	True	ATTAAA	-17	NA	155709360	155734384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.38	chr4	+	2640	19	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-6	-6	intron_retention	FALSE	canonical	1	1	junction_13	158.705965021272	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3997	False	NA	17	True	ATTAAA	-22	NA	155709360	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155731939_155732062_155732318_155732425_155732681_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.4	chr4	+	2736	20	FSM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	-66	3	-10	-3	multi-exon	FALSE	canonical	3	183	junction_2	84.1228490935262	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3937	False	NA	20	True	ATTAAA	-25	NA	155709300	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.41	chr4	+	2804	21	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	12	-6	intron_retention	FALSE	canonical	2	11	junction_8	164.666056004266	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	4015	False	NA	17	True	ATTAAA	-22	NA	155709378	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709641_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724056_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.42	chr4	+	2943	22	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	12	-6	intron_retention	FALSE	canonical	0	0	junction_7	180.787957879627	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	4015	False	NA	17	True	ATTAAA	-22	NA	155709378	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709641_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722753_155722887_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.43	chr4	+	2814	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_1	127.178022108693	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	4017	False	NA	20	True	ATTAAA	-25	NA	155709380	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709557_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.44	chr4	+	3054	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	14	-3	intron_retention	FALSE	canonical	3	58	junction_1	117.495046161854	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	4017	False	NA	20	True	ATTAAA	-25	NA	155709380	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.46	chr4	+	3157	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	27	-6	intron_retention	FALSE	canonical	3	57	junction_1	117.65666752353	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	4030	False	NA	17	True	ATTAAA	-22	NA	155709393	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.47	chr4	+	2906	20	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	30	-13	intron_retention	FALSE	canonical	3	49	junction_8	138.213412404227	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGGGAAAGAAGTGTCTA	4033	False	NA	10	True	ATTAAA	-15	NA	155709396	155734382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.48	chr4	+	2516	19	FSM	ENSMUSG00000029062.15	ENSMUST00000105600.8	3170	19	647	7	620	-7	multi-exon	FALSE	canonical	3	247	junction_1	73.1081770772296	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGTGTCTAACTTGC	4623	False	NA	16	True	ATTAAA	-21	NA	155709986	155734388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.5	chr4	+	2534	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-7	-6	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	123.771570491975	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	3940	False	NA	17	True	ATTAAA	-22	NA	155709303	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.51	chr4	+	2054	15	ISM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	9134	6	-124	-6	3prime_fragment	FALSE	canonical	3	333	junction_3	59.6005838212742	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	225	False	NA	17	True	ATTAAA	-22	NA	155718500	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.52	chr4	+	3662	15	NNC	ENSMUSG00000029062.15	novel	631	3	NA	NA	2002	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.499152865987	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	2351	False	NA	17	True	ATTAAA	-22	NA	155720626	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155721737_155722296_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.54	chr4	+	1797	12	NNC	ENSMUSG00000029062.15	novel	3170	19	NA	NA	5639	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.126334249033	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	2531	False	NA	17	True	ATTAAA	-22	NA	155724263	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155724399_155725203_155725270_155725971_155726322_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.55	chr4	+	1423	10	ISM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	16604	6	-5689	-6	3prime_fragment	FALSE	canonical	3	428	junction_3	43.6741582490771	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTGTCTAACTTGCC	4238	False	NA	17	True	ATTAAA	-22	NA	155725970	155734389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.56	chr4	+	178	1	Intergenic	novelGene_21110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAACATCCCTCAT	2657	False	NA	NA	False	NA	NA	NA	155731004	155731182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155731000_155731200
ES.25316.6	chr4	+	2881	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	-3	intron_retention	FALSE	canonical	3	40	junction_1	141.147538058586	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3947	False	NA	20	True	ATTAAA	-25	NA	155709310	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709641_155709797_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.7	chr4	+	2660	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.97994438695	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACTTGCCTCGTAAGAA	3947	False	NA	26	True	ATTAAA	-31	NA	155709310	155734398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ES.25316.9	chr4	+	2582	20	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	121.410957078078	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTAACTTGCCTCG	3948	False	NA	20	True	ATTAAA	-25	NA	155709311	155734392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733902_155734069_155734148
ES.25317.1	chr4	-	111	1	Intergenic	novelGene_21109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155714532	155714421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155714400_155714500
ES.25318.1	chr4	-	2156	5	NIC	ENSMUSG00000029061.3	novel	1434	8	NA	NA	2	1	intron_retention	FALSE	canonical	2	8	junction_3	2.04633819296811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTTGTTTCCTGGGA	NA	False	NA	NA	False	GATAAA	-17	NA	155737662	155735110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736819_155736905
ES.25318.2	chr4	-	660	1	NIC	ENSMUSG00000029061.3	novel	1434	8	NA	NA	710	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGTGTTGTTTCCTGG	209	False	NA	NA	False	GATAAA	-15	NA	155735772	155735112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155735100_155735800
ES.25318.3	chr4	-	1879	5	NIC	ENSMUSG00000029061.3	novel	1434	8	NA	NA	-42	1	intron_retention	FALSE	canonical	2	8	junction_2	1.78535710713571	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGTGTTGTTTCCTGG	NA	False	NA	NA	False	GATAAA	-15	NA	155737706	155735112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155735591_155735695_155735807_155735887_155736819_155736905_155737043_155737484
ES.25318.4	chr4	-	1206	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	227	1	50	1	multi-exon	FALSE	canonical	2	6	junction_5	2.50713268211203	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGTGTTGTTTCCTGG	NA	False	NA	NA	False	GATAAA	-15	NA	155737614	155735112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ES.25319.1	chr4	+	173	1	Intergenic	novelGene_21111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	155746929	155747102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155746900_155747100
ES.2532.1	chr10	+	178	1	Intergenic	novelGene_1923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTAATACACAAA	NA	False	NA	NA	False	NA	NA	NA	30062020	30062198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30062000_30062200
ES.25320.1	chr4	+	179	1	Intergenic	novelGene_21112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGTAAAAAAAGCATTTG	NA	False	NA	NA	False	NA	NA	NA	155751848	155752027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155751800_155752000
ES.25321.1	chr4	+	178	1	Intergenic	novelGene_21113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	155752168	155752346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155752200_155752300
ES.25322.1	chr4	-	4020	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	5	-383	0	378	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTCTTGACAGTTACG	7425	False	NA	NA	False	NA	NA	NA	155753650	155738755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.100	chr4	-	3713	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	118	junction_11	55.7439152109446	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7430	False	NA	-6	True	TATAAA	-12	NA	155753645	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.101	chr4	-	3526	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_16	100.602065700803	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.104	chr4	-	6456	10	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	391	0	intron_retention	FALSE	canonical	3	258	junction_7	34.0457208928099	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7816	False	NA	-6	True	TATAAA	-12	NA	155753259	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740763_155740850_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.106	chr4	-	4524	15	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_1	91.4966264572701	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7434	False	NA	-6	True	TATAAA	-12	NA	155753641	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739557_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155742218_155742311_155742417_155743350_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.108	chr4	-	3341	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_13	107.07733446232	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7458	False	NA	-6	True	TATAAA	-12	NA	155753617	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743478_155743579_155743723_155743844_155744040_155744134_155744242_155745779_155745832_155751470_155751627_155753030
ES.25322.11	chr4	-	5050	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	207	intron_retention	FALSE	canonical	3	51	junction_17	71.8021117558192	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7425	False	NA	NA	False	NA	NA	NA	155753650	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.110	chr4	-	3411	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_13	123.73158922781	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743478_155743579_155743761_155743844_155744040_155744134_155744242_155745779_155745832_155751470_155751627_155753030
ES.25322.111	chr4	-	3466	12	NNC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	58	0	intron_retention	FALSE	canonical	1	4	junction_11	99.4665939186877	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	155743982	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743892
ES.25322.112	chr4	-	3600	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_18	87.4819981481905	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7422	False	NA	-6	True	TATAAA	-12	NA	155753653	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745645_155745779_155745832_155751470_155751627_155753030
ES.25322.113	chr4	-	3838	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	236	0	intron_retention	FALSE	canonical	3	51	junction_16	79.716269316558	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7661	False	NA	-6	True	TATAAA	-12	NA	155753414	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155742218_155742311_155742417_155743350_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.114	chr4	-	3626	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_20	92.1797700149008	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753155_155753271
ES.25322.115	chr4	-	3845	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_18	116.242150936401	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7424	False	NA	-6	True	TATAAA	-12	NA	155753651	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745849_155753030
ES.25322.116	chr4	-	3388	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	88.896836276664	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7475	False	NA	-7	True	TATAAA	-11	NA	155753600	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753155_155753447
ES.25322.117	chr4	-	5133	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	36	-1	intron_retention	FALSE	canonical	3	258	junction_14	37.4202798459605	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7461	False	NA	-7	True	TATAAA	-11	NA	155753614	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.119	chr4	-	4413	16	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	173	junction_9	47.788236581355	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7425	False	NA	-7	True	TATAAA	-11	NA	155753650	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.12	chr4	-	3810	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	203	intron_retention	FALSE	canonical	1	2	junction_18	93.3590381270073	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTCACGTGGCTTTT	7436	False	NA	NA	False	NA	NA	NA	155753639	155738930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.120	chr4	-	3427	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	38	-1	intron_retention	FALSE	canonical	0	0	junction_2	86.6229949412692	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7463	False	NA	-7	True	TATAAA	-11	NA	155753612	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739960_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.121	chr4	-	4974	15	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-54	-1	intron_retention	FALSE	canonical	0	0	junction_1	79.7640973401555	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7366	False	NA	-7	True	TATAAA	-11	NA	155753709	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.122	chr4	-	2509	7	NIC	ENSMUSG00000029060.18	novel	2202	11	NA	NA	262	-1	intron_retention	FALSE	canonical	3	298	junction_6	33.1096662622866	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	NA	False	NA	-7	True	TATAAA	-11	NA	155742174	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155740763_155740850_155741527_155741622_155741772_155741845_155741980_155742054
ES.25322.123	chr4	-	3832	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	72	junction_12	72.017744726946	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7411	False	NA	-7	True	TATAAA	-11	NA	155753664	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.124	chr4	-	3691	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_11	114.082780849814	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7423	False	NA	-7	True	TATAAA	-11	NA	155753652	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742317_155742417_155743350_155743459_155743579_155743723_155743892_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.125	chr4	-	3880	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	65	-1	intron_retention	FALSE	canonical	0	0	junction_18	123.942567344718	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7490	False	NA	-7	True	TATAAA	-11	NA	155753585	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751283_155751375_155751470_155751627_155753030_155753188_155753447
ES.25322.127	chr4	-	3576	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	-1	intron_retention	FALSE	canonical	1	1	junction_18	98.4791135341354	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7436	False	NA	-7	True	TATAAA	-11	NA	155753639	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155753030
ES.25322.128	chr4	-	4817	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	100.713406810706	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7441	False	NA	-7	True	TATAAA	-11	NA	155753634	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741848_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.129	chr4	-	3572	4	NIC	ENSMUSG00000029060.18	novel	2202	11	NA	NA	-209	-1	intron_retention	FALSE	canonical	3	262	junction_3	20.757863302587	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	NA	False	NA	-7	True	TATAAA	-11	NA	155743005	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155740978_155741102_155741772_155741845_155742218_155742311
ES.25322.13	chr4	-	3974	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-28	203	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTCACGTGGCTTTT	7392	False	NA	NA	False	NA	NA	NA	155753683	155738930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.130	chr4	-	3394	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	203	-1	intron_retention	FALSE	canonical	2	8	junction_1	100.666973264188	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7628	False	NA	-7	True	TATAAA	-11	NA	155753447	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.133	chr4	-	4022	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	25	junction_15	81.8431278596723	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7421	False	NA	-7	True	TATAAA	-11	NA	155753654	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.134	chr4	-	3023	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	395	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_16	85.3864128897147	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7820	False	NA	-7	True	TATAAA	-11	NA	155753255	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.135	chr4	-	4068	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	38	-1	intron_retention	FALSE	canonical	0	0	junction_11	104.90193146417	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7463	False	NA	-7	True	TATAAA	-11	NA	155753612	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743501_155743696_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.136	chr4	-	3546	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	263	-1	intron_retention	FALSE	canonical	0	0	junction_17	93.6398571095993	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7688	False	NA	-7	True	TATAAA	-11	NA	155753387	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155744040_155744134_155744242_155745306_155745479_155745562_155745788_155751470_155751627_155753030
ES.25322.137	chr4	-	3938	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	-1	intron_retention	FALSE	canonical	3	173	junction_11	49.307873975524	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7426	False	NA	-7	True	TATAAA	-11	NA	155753649	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.138	chr4	-	4011	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_17	112.352507193103	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7422	False	NA	-7	True	TATAAA	-11	NA	155753653	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155748332_155748523_155751470_155751627_155753030
ES.25322.139	chr4	-	3796	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	56	-1	intron_retention	FALSE	canonical	3	118	junction_12	60.4295819528813	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7481	False	NA	-7	True	TATAAA	-11	NA	155753594	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.14	chr4	-	1979	5	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-402	202	intron_retention	FALSE	canonical	3	313	junction_3	27.0034719989856	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGGCTCACGTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	155741586	155738931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740158_155740528_155740763_155740850_155741264_155741369
ES.25322.141	chr4	-	3541	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	88.896836276664	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7462	False	NA	-7	True	TATAAA	-11	NA	155753613	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753295_155753447
ES.25322.142	chr4	-	5222	6	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-848	-1	intron_retention	FALSE	canonical	3	307	junction_3	26.4983018323816	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	NA	False	NA	-7	True	TATAAA	-11	NA	155744888	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622
ES.25322.143	chr4	-	3813	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	-1	intron_retention	FALSE	canonical	2	8	junction_1	89.2750120570016	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7436	False	NA	-7	True	TATAAA	-11	NA	155753639	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.144	chr4	-	3583	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	-1	intron_retention	FALSE	canonical	1	4	junction_13	89.3412966323559	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7429	False	NA	-7	True	TATAAA	-11	NA	155753646	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743892_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.145	chr4	-	3221	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	93.6298200888827	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7377	False	NA	-7	True	TATAAA	-11	NA	155753698	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745843_155753443
ES.25322.147	chr4	-	3397	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	111.516994220612	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7434	False	NA	-7	True	TATAAA	-11	NA	155753641	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745788_155751470_155751627_155753030_155753155_155753447
ES.25322.148	chr4	-	4595	14	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	78	-1	intron_retention	FALSE	canonical	3	173	junction_9	55.3471026806998	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7503	False	NA	-7	True	TATAAA	-11	NA	155753572	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.149	chr4	-	3834	17	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	-1	intron_retention	FALSE	canonical	1	2	junction_11	107.213499033471	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7433	False	NA	-7	True	TATAAA	-11	NA	155753642	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743761_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.150	chr4	-	3714	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	35	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	95.8975676975423	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7460	False	NA	-7	True	TATAAA	-11	NA	155753615	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741839_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.151	chr4	-	3838	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	-1	intron_retention	FALSE	canonical	3	119	junction_12	61.1135605569715	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7429	False	NA	-7	True	TATAAA	-11	NA	155753646	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.152	chr4	-	3402	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	212	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_20	87.3260986189123	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7637	False	NA	-7	True	TATAAA	-11	NA	155753438	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753155_155753271
ES.25322.153	chr4	-	3793	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	213	-1	intron_retention	FALSE	canonical	3	118	junction_11	58.541855017819	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7638	False	NA	-7	True	TATAAA	-11	NA	155753437	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.154	chr4	-	3257	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-297	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.215470377137	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7123	False	NA	-7	True	TATAAA	-11	NA	155753952	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739960_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753793
ES.25322.155	chr4	-	3632	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	2	junction_18	88.5806271145108	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7392	False	NA	-7	True	TATAAA	-11	NA	155753683	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.156	chr4	-	3541	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-33	-1	intron_retention	FALSE	canonical	1	2	junction_17	87.3113320140115	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7387	False	NA	-7	True	TATAAA	-11	NA	155753688	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.157	chr4	-	3426	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	92	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_19	85.9429689143747	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7517	False	NA	-7	True	TATAAA	-11	NA	155753558	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753155_155753271
ES.25322.158	chr4	-	3954	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	392	-1	intron_retention	FALSE	canonical	3	173	junction_10	46.7138897973611	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7817	False	NA	-7	True	TATAAA	-11	NA	155753258	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.159	chr4	-	3697	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	37	-1	intron_retention	FALSE	canonical	3	51	junction_19	88.5989751258546	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7462	False	NA	-7	True	TATAAA	-11	NA	155753613	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.16	chr4	-	3812	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	119	junction_12	64.3806437056249	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7424	False	NA	-2	True	TATAAA	-16	NA	155753651	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.160	chr4	-	3100	18	NNC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-4794	-1	intron_retention	FALSE	canonical	0	0	junction_17	100.740819942902	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	2626	False	NA	-7	True	TATAAA	-11	NA	155758449	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155758412
ES.25322.161	chr4	-	3904	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_16	109.32469478068	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7421	False	NA	-7	True	TATAAA	-11	NA	155753654	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155748332_155748523_155751470_155751627_155753030
ES.25322.162	chr4	-	3568	15	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	372	-1	intron_retention	FALSE	canonical	0	0	junction_10	111.004320563091	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7797	False	NA	-7	True	TATAAA	-11	NA	155753278	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739978_155740763_155740850_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155744171_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.163	chr4	-	3527	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	204	-1	intron_retention	FALSE	canonical	3	118	junction_11	58.541855017819	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7629	False	NA	-7	True	TATAAA	-11	NA	155753446	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.164	chr4	-	3626	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	2	junction_18	93.3590381270073	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7410	False	NA	-7	True	TATAAA	-11	NA	155753665	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.165	chr4	-	3709	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-56	-1	intron_retention	FALSE	canonical	1	2	junction_17	95.7715380475849	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7364	False	NA	-7	True	TATAAA	-11	NA	155753711	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.166	chr4	-	6352	15	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	-1	intron_retention	FALSE	canonical	3	258	junction_12	38.721467441412	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7429	False	NA	-7	True	TATAAA	-11	NA	155753646	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.167	chr4	-	5146	15	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	258	junction_12	38.7832806392504	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7399	False	NA	-7	True	TATAAA	-11	NA	155753676	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.168	chr4	-	3491	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	9	-1	intron_retention	FALSE	canonical	2	9	junction_17	86.1131768336109	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7434	False	NA	-7	True	TATAAA	-11	NA	155753641	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745645_155745779_155745832_155751470_155751627_155753030
ES.25322.169	chr4	-	3597	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	88.896836276664	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7443	False	NA	-7	True	TATAAA	-11	NA	155753632	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753332_155753447
ES.25322.17	chr4	-	3570	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	256	-2	intron_retention	FALSE	canonical	3	118	junction_10	57.371289368028	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7681	False	NA	-2	True	TATAAA	-16	NA	155753394	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.170	chr4	-	3731	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	93.1144709974839	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTCCTGTTCCTT	7428	False	NA	-7	True	TATAAA	-11	NA	155753647	155739140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739442_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.171	chr4	-	3494	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-248	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	125.380374170549	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7172	False	NA	-8	True	TATAAA	-10	NA	155753903	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155744037_155744130_155744242_155745306_155745471_155745560_155745832_155751470_155751627_155753030_155753188_155753793
ES.25322.173	chr4	-	3615	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-56	-2	intron_retention	FALSE	canonical	3	10	junction_2	90.8194518784724	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7364	False	NA	-8	True	TATAAA	-10	NA	155753711	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.174	chr4	-	3098	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	415	-2	intron_retention	FALSE	canonical	3	25	junction_15	87.3545850508819	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7840	False	NA	-8	True	TATAAA	-10	NA	155753235	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.175	chr4	-	5705	12	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-45	-2	intron_retention	FALSE	canonical	3	258	junction_9	32.4409189626388	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7375	False	NA	-8	True	TATAAA	-10	NA	155753700	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740763_155740850_155740978_155741102_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.176	chr4	-	3277	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	104.642856535087	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7460	False	NA	-8	True	TATAAA	-10	NA	155753615	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753155_155753447
ES.25322.177	chr4	-	3278	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_18	109.427240610619	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7434	False	NA	-8	True	TATAAA	-10	NA	155753641	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745724_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.178	chr4	-	3789	10	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	14	-2	intron_retention	FALSE	canonical	3	262	junction_9	35.1160334102406	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	NA	False	NA	-8	True	TATAAA	-10	NA	155744026	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311
ES.25322.18	chr4	-	3929	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	-2	intron_retention	FALSE	canonical	3	173	junction_12	47.9601171756927	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7365	False	NA	-2	True	TATAAA	-16	NA	155753710	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.180	chr4	-	3419	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	99.4723579694379	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7424	False	NA	-8	True	TATAAA	-10	NA	155753651	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.181	chr4	-	3527	22	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_18	102.41693719763	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7421	False	NA	-8	True	TATAAA	-10	NA	155753654	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745645_155745779_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.182	chr4	-	3172	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	98.6358341465097	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7422	False	NA	-8	True	TATAAA	-10	NA	155753653	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155753447
ES.25322.184	chr4	-	3641	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	212	-2	intron_retention	FALSE	canonical	0	0	junction_17	85.0500215922342	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7637	False	NA	-8	True	TATAAA	-10	NA	155753438	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751480_155751627_155753030
ES.25322.185	chr4	-	3628	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	18	-2	intron_retention	FALSE	canonical	3	25	junction_16	79.9818073450009	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTTTGCTTCCTGTTCCT	7443	False	NA	-8	True	TATAAA	-10	NA	155753632	155739141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.186	chr4	-	3483	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	87.6557734894786	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTTTGCTTCCTGTTCC	7422	False	NA	-9	True	TATAAA	-9	NA	155753653	155739142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753295_155753447
ES.25322.187	chr4	-	166	1	Intergenic	novelGene_21114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAAGTTCTTCCT	3792	False	NA	NA	False	NA	NA	NA	155757283	155757117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155757100_155757300
ES.25322.19	chr4	-	3600	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	-2	intron_retention	FALSE	canonical	2	8	junction_1	85.7795948281926	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7436	False	NA	-2	True	TATAAA	-16	NA	155753639	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.20	chr4	-	3890	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	-2	intron_retention	FALSE	canonical	1	1	junction_17	106.579506171375	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7365	False	NA	-2	True	TATAAA	-16	NA	155753710	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155748332_155748523_155751470_155751627_155753030
ES.25322.21	chr4	-	3781	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTTCCTTGCCTA	7392	False	NA	-2	True	TATAAA	-16	NA	155753683	155739135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.22	chr4	-	3748	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-38	1	intron_retention	FALSE	canonical	2	8	junction_1	86.902594563271	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7382	False	NA	-4	True	TATAAA	-14	NA	155753693	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.23	chr4	-	3614	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7365	False	NA	-4	True	TATAAA	-14	NA	155753710	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.24	chr4	-	3466	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	93.6566068144688	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7445	False	NA	-4	True	TATAAA	-14	NA	155753630	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.25	chr4	-	2924	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	111.229104016201	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7434	False	NA	-4	True	TATAAA	-14	NA	155753641	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155753447
ES.25322.26	chr4	-	3632	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	1	intron_retention	FALSE	canonical	1	6	junction_3	87.290707352087	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7426	False	NA	-4	True	TATAAA	-14	NA	155753649	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739796_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.27	chr4	-	3257	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	375	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	88.2823752386499	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7800	False	NA	-4	True	TATAAA	-14	NA	155753275	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740152_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.28	chr4	-	5358	15	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	1	intron_retention	FALSE	canonical	3	258	junction_12	38.7736103186543	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7436	False	NA	-4	True	TATAAA	-14	NA	155753639	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.3	chr4	-	3426	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	163	207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	87.6557734894786	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7588	False	NA	NA	False	NA	NA	NA	155753487	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.30	chr4	-	3701	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	16	1	intron_retention	FALSE	canonical	2	8	junction_1	91.8849696382894	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7441	False	NA	-4	True	TATAAA	-14	NA	155753634	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.31	chr4	-	3653	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_20	81.1806011310584	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7422	False	NA	-4	True	TATAAA	-14	NA	155753653	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.33	chr4	-	3598	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_16	89.7795138721029	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCCTGTTCCTTGCC	7426	False	NA	-4	True	TATAAA	-14	NA	155753649	155739137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745601_155745832_155751470_155751627_155753030
ES.25322.34	chr4	-	3911	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-39	0	intron_retention	FALSE	canonical	1	2	junction_13	92.6945235240897	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7381	False	NA	-5	True	TATAAA	-13	NA	155753694	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743761_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.35	chr4	-	3779	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_13	101.503981063528	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	-5	True	TATAAA	-13	NA	155753650	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742409_155743350_155743501_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.36	chr4	-	4236	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	173	junction_11	49.0503589819991	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7426	False	NA	-5	True	TATAAA	-13	NA	155753649	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.37	chr4	-	5515	13	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	37	0	intron_retention	FALSE	canonical	3	258	junction_10	31.2786535302699	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7462	False	NA	-5	True	TATAAA	-13	NA	155753613	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.38	chr4	-	3751	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-7	0	intron_retention	FALSE	canonical	1	7	junction_4	94.3392534252954	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7413	False	NA	-5	True	TATAAA	-13	NA	155753662	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740152_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.39	chr4	-	4165	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-56	0	intron_retention	FALSE	canonical	3	119	junction_12	63.9245552619031	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7364	False	NA	-5	True	TATAAA	-13	NA	155753711	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.4	chr4	-	3857	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	207	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_20	81.1806011310584	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7429	False	NA	NA	False	NA	NA	NA	155753646	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.40	chr4	-	4745	16	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	0	intron_retention	FALSE	canonical	3	25	junction_13	81.2298795600076	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7433	False	NA	-5	True	TATAAA	-13	NA	155753642	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.41	chr4	-	4942	2	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-114	0	intron_retention	FALSE	canonical	3	305	junction_1	0	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	NA	False	NA	-5	True	TATAAA	-13	NA	155744154	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155741772_155741845
ES.25322.42	chr4	-	4931	17	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	84.6123282610164	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	-5	True	TATAAA	-13	NA	155753651	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740520_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.43	chr4	-	3660	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_18	88.896836276664	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7429	False	NA	-5	True	TATAAA	-13	NA	155753646	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745724_155745832_155751470_155751627_155753030
ES.25322.44	chr4	-	3752	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	88	0	intron_retention	FALSE	non_canonical	0	0	junction_8	97.7738162076252	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7513	False	NA	-5	True	TATAAA	-13	NA	155753562	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741846_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.45	chr4	-	4612	7	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-283	0	intron_retention	FALSE	canonical	3	262	junction_6	41.9523539268061	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	NA	False	NA	-5	True	TATAAA	-13	NA	155744323	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155740763_155740850_155740978_155741102_155741772_155741845_155742218_155742311
ES.25322.46	chr4	-	3690	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_17	91.0376318645892	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7429	False	NA	-5	True	TATAAA	-13	NA	155753646	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745601_155745832_155751470_155751627_155753030
ES.25322.47	chr4	-	3628	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_18	81.3382663956327	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	-5	True	TATAAA	-13	NA	155753650	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.48	chr4	-	3438	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	87.6557734894786	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7364	False	NA	-5	True	TATAAA	-13	NA	155753711	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.49	chr4	-	3601	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-16	0	intron_retention	FALSE	canonical	1	2	junction_16	89.6665461929522	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7404	False	NA	-5	True	TATAAA	-13	NA	155753671	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.5	chr4	-	3919	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	207	intron_retention	FALSE	canonical	2	8	junction_1	86.902594563271	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7422	False	NA	NA	False	NA	NA	NA	155753653	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.50	chr4	-	3808	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	37	0	intron_retention	FALSE	canonical	1	1	junction_19	107.25716759266	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7462	False	NA	-5	True	TATAAA	-13	NA	155753613	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751283_155751396_155751470_155751627_155753030
ES.25322.51	chr4	-	3209	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	223	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_17	98.8794594443153	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7648	False	NA	-5	True	TATAAA	-13	NA	155753427	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.52	chr4	-	3554	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-33	0	intron_retention	FALSE	canonical	3	25	junction_17	87.0335051858234	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7387	False	NA	-5	True	TATAAA	-13	NA	155753688	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.53	chr4	-	3882	10	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	123	0	intron_retention	FALSE	canonical	3	262	junction_8	36.7708956299965	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	NA	False	NA	-5	True	TATAAA	-13	NA	155743917	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155743723_155743844
ES.25322.54	chr4	-	4107	17	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	10	0	intron_retention	FALSE	canonical	3	25	junction_14	98.9609889994537	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7435	False	NA	-5	True	TATAAA	-13	NA	155753640	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.55	chr4	-	5378	15	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	262	junction_10	35.7103569267619	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7424	False	NA	-5	True	TATAAA	-13	NA	155753651	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745832_155751470_155751627_155753030
ES.25322.56	chr4	-	3716	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	11	0	intron_retention	FALSE	canonical	1	7	junction_4	89.419395294576	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7436	False	NA	-5	True	TATAAA	-13	NA	155753639	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740152_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.57	chr4	-	3472	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	88.896836276664	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7426	False	NA	-5	True	TATAAA	-13	NA	155753649	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.58	chr4	-	3442	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	103.988208466153	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	-5	True	TATAAA	-13	NA	155753650	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739422_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753449
ES.25322.6	chr4	-	3932	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-3	207	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7417	False	NA	NA	False	NA	NA	NA	155753658	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.60	chr4	-	3887	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-53	0	intron_retention	FALSE	canonical	3	119	junction_12	63.9245552619031	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7367	False	NA	-5	True	TATAAA	-13	NA	155753708	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.61	chr4	-	5543	17	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	128.180475794873	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7425	False	NA	-5	True	TATAAA	-13	NA	155753650	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740846_155740978_155741102_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155749715_155749791_155751283_155751627_155753030
ES.25322.62	chr4	-	3571	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-38	0	intron_retention	FALSE	canonical	3	25	junction_17	92.2052690161958	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7382	False	NA	-5	True	TATAAA	-13	NA	155753693	155739138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.63	chr4	-	5782	11	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_8	33.9935287959341	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7425	False	NA	-6	True	TATAAA	-12	NA	155753650	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740763_155740850_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.64	chr4	-	4836	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	51	junction_17	71.8021117558192	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.65	chr4	-	4342	16	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	119	junction_9	62.0230781421095	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7424	False	NA	-6	True	TATAAA	-12	NA	155753651	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.66	chr4	-	3928	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_19	132.423646531368	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7430	False	NA	-6	True	TATAAA	-12	NA	155753645	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743534_155743696_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745779_155745832_155751283_155751424_155753030
ES.25322.67	chr4	-	2245	13	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	178	0	intron_retention	FALSE	non_canonical	0	0	junction_8	104.881944214542	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	155743862	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741846_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844
ES.25322.69	chr4	-	6427	3	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-1711	0	intron_retention	FALSE	canonical	3	305	junction_2	37.5	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	155745751	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155741772_155741845
ES.25322.7	chr4	-	3549	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-301	207	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	87.4834372927471	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7119	False	NA	NA	False	NA	NA	NA	155753956	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753793
ES.25322.71	chr4	-	3493	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	66	0	intron_retention	FALSE	canonical	0	0	junction_19	95.9877069691566	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7491	False	NA	-6	True	TATAAA	-12	NA	155753584	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.73	chr4	-	2014	13	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	415	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.429149458561	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	155743625	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739714_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579
ES.25322.76	chr4	-	4068	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-2	0	intron_retention	FALSE	canonical	3	51	junction_16	73.6887192435179	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7423	False	NA	-6	True	TATAAA	-12	NA	155753652	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.77	chr4	-	4126	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	51	junction_18	89.6506422415422	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.78	chr4	-	3653	21	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_20	86.4360312601174	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7432	False	NA	-6	True	TATAAA	-12	NA	155753643	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.79	chr4	-	3744	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	69	0	intron_retention	FALSE	canonical	0	0	junction_19	104.179740269154	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7494	False	NA	-6	True	TATAAA	-12	NA	155753581	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743534_155743696_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753447
ES.25322.8	chr4	-	3863	21	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	10	207	combination_of_known_junctions	FALSE	canonical	3	51	junction_20	86.4360312601174	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7435	False	NA	NA	False	NA	NA	NA	155753640	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.80	chr4	-	5432	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_17	95.7190959460009	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7425	False	NA	-6	True	TATAAA	-12	NA	155753650	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155752155_155752351
ES.25322.81	chr4	-	3658	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.646260120074	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7433	False	NA	-6	True	TATAAA	-12	NA	155753642	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739626_155739708_155739897_155739978_155740158_155740520_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.82	chr4	-	4338	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	20	0	intron_retention	FALSE	canonical	3	173	junction_11	50.2131394656817	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7445	False	NA	-6	True	TATAAA	-12	NA	155753630	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.83	chr4	-	4814	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-10	0	intron_retention	FALSE	canonical	3	258	junction_15	36.4699240926246	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7410	False	NA	-6	True	TATAAA	-12	NA	155753665	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.84	chr4	-	3093	9	NIC	ENSMUSG00000029060.18	novel	3282	17	NA	NA	-166	0	intron_retention	FALSE	canonical	3	262	junction_8	42.0652395095998	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	NA	False	NA	-6	True	TATAAA	-12	NA	155742962	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741772_155741845_155741980_155742054_155742218_155742311
ES.25322.85	chr4	-	5071	16	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	25	junction_13	81.1266225655234	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7429	False	NA	-6	True	TATAAA	-12	NA	155753646	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
ES.25322.86	chr4	-	4805	16	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	212	0	intron_retention	FALSE	canonical	3	258	junction_13	37.7420484635138	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7637	False	NA	-6	True	TATAAA	-12	NA	155753438	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.87	chr4	-	3878	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_17	85.0500215922342	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7429	False	NA	-6	True	TATAAA	-12	NA	155753646	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745849_155751470_155751627_155753030
ES.25322.88	chr4	-	3942	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_19	111.398597387938	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7421	False	NA	-6	True	TATAAA	-12	NA	155753654	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155748332_155748527_155751470_155751627_155753030
ES.25322.89	chr4	-	3740	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-39	0	intron_retention	FALSE	canonical	1	2	junction_17	90.2246196692446	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7381	False	NA	-6	True	TATAAA	-12	NA	155753694	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745656_155745787_155745832_155751470_155751627_155753030
ES.25322.9	chr4	-	5482	16	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	207	intron_retention	FALSE	canonical	3	258	junction_13	38.4451123898301	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCACGTGGCTTTTCTAT	7422	False	NA	NA	False	NA	NA	NA	155753653	155738926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.90	chr4	-	3522	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	335	0	intron_retention	FALSE	canonical	0	0	junction_17	97.9025718775912	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7760	False	NA	-6	True	TATAAA	-12	NA	155753315	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745849_155751470_155751627_155753030
ES.25322.91	chr4	-	5619	13	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	0	intron_retention	FALSE	canonical	1	2	junction_7	96.3832050837812	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7365	False	NA	-6	True	TATAAA	-12	NA	155753710	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740763_155740850_155740978_155741102_155742218_155742311_155743761_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.92	chr4	-	3442	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-311	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	88.7386049022634	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7109	False	NA	-6	True	TATAAA	-12	NA	155753966	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753793
ES.25322.93	chr4	-	4969	16	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	258	junction_13	38.4347065380584	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7426	False	NA	-6	True	TATAAA	-12	NA	155753649	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.95	chr4	-	3771	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-55	0	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7365	False	NA	-6	True	TATAAA	-12	NA	155753710	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25322.96	chr4	-	3477	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_17	92.4141048866834	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7428	False	NA	-6	True	TATAAA	-12	NA	155753647	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155753030
ES.25322.97	chr4	-	3303	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	61	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	97.3003495609926	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7486	False	NA	-6	True	TATAAA	-12	NA	155753589	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.98	chr4	-	4764	18	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_12	100.68894167573	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7414	False	NA	-6	True	TATAAA	-12	NA	155753661	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155743723_155743844_155744040_155744171_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
ES.25322.99	chr4	-	4509	17	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	386	0	intron_retention	FALSE	canonical	3	258	junction_14	37.4202798459605	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7811	False	NA	-6	True	TATAAA	-12	NA	155753264	155739139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ES.25323.1	chr4	-	221	1	Intergenic	novelGene_21115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACATTTACTGGTCA	1182	False	NA	NA	False	TTTAAA	-10	NA	155773386	155773165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155773200_155773400
ES.25324.1	chr4	+	2163	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	-23	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCACTGTCTTGTGTGT	NA	False	NA	8	True	NA	NA	NA	155778775	155780938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155778800_155780900
ES.25324.2	chr4	+	3397	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	12	-1269	12	1269	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAACAACAAAAATCCCC	NA	False	NA	NA	False	NA	NA	NA	155778810	155782207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155778800_155782200
ES.25325.1	chr4	+	1368	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	12	92	12	-92	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTCTGTTGTTGGCCC	NA	False	NA	25	True	AATAAA	-25	NA	155789268	155818244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ES.25325.12	chr4	+	5888	3	NNC	ENSMUSG00000029038.10	novel	1555	2	NA	NA	29	4590	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	837.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATAGTTATTCTTGTC	NA	False	NA	NA	False	GATAAA	-20	NA	155789620	155805725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155789919_155799918_155803172_155803388
ES.25325.13	chr4	+	4456	5	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	40	-98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	715.611975864015	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGCAAGTGTCTGTTGT	NA	False	NA	19	True	AATAAA	-19	NA	155789631	155818238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155789919_155799918_155800105_155812366_155815922_155816383_155816503_155817929
ES.25325.14	chr4	+	856	5	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	179	-96	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	746.318757301463	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAAGTGTCTGTTGTTG	NA	False	NA	21	True	AATAAA	-21	NA	155789770	155818240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817935
ES.25325.15	chr4	+	1517	2	FSM	ENSMUSG00000029038.10	ENSMUST00000140322.2	1555	2	227	-189	216	189	multi-exon	FALSE	canonical	3	1675	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTCTGGGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	155789807	155801324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155789919_155799918
ES.25325.16	chr4	+	4475	4	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	18664	-94	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	771.482123361693	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGTGTCTGTTGTTGGC	4635	False	NA	23	True	AATAAA	-23	NA	155808255	155818242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155810435_155814057_155815922_155816383_155816503_155817929
ES.25325.17	chr4	+	4699	1	NIC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	23949	-97	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCAAGTGTCTGTTGTT	421	False	NA	20	True	AATAAA	-20	NA	155813540	155818239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155813500_155818200
ES.25325.2	chr4	+	930	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	-87	31	-76	-31	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAAACCAAGAAGTACA	NA	False	NA	NA	False	AATAAA	-28	NA	155789504	155816615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
ES.25325.4	chr4	+	1748	1	NIC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	-29	-9836	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGGGG	NA	False	NA	NA	False	TATAAA	-29	NA	155789551	155791299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155789600_155791300
ES.25325.5	chr4	+	3715	3	NNC	ENSMUSG00000029038.10	novel	1555	2	NA	NA	-29	2345	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	837.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTCCCAGTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	155789551	155803480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155789919_155799918_155803164_155803377
ES.25325.6	chr4	+	2043	2	FSM	ENSMUSG00000029038.10	ENSMUST00000140322.2	1555	2	-28	-460	-28	460	multi-exon	FALSE	canonical	3	1675	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCGGCCATTGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	155789552	155801595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155789919_155799918
ES.25325.8	chr4	+	3257	4	NNC	ENSMUSG00000029038.10	novel	874	4	NA	NA	-28	-96	intron_retention	FALSE	canonical	0	0	junction_2	805.111586469023	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAAGTGTCTGTTGTTG	NA	False	NA	21	True	AATAAA	-21	NA	155789552	155818240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155789919_155799918_155800849_155815817_155815922_155816383
ES.25325.9	chr4	+	936	4	NIC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	-10	-103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	813.430185490228	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTACAGCAAGTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	155789570	155818233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155789919_155799918_155800063_155815781_155815922_155817929
ES.25326.1	chr4	-	180	1	Intergenic	novelGene_21116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATTAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	155799489	155799309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155799300_155799500
ES.25327.1	chr4	-	179	1	Intergenic	novelGene_21117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155803380	155803201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155803200_155803400
ES.25328.1	chr4	-	6524	1	Intergenic	novelGene_21118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155814084	155807560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155807600_155814100
ES.25328.2	chr4	-	160	1	Intergenic	novelGene_21119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	155812242	155812082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155812100_155812200
ES.25329.1	chr4	-	1550	2	Genic_Genomic	ENSMUSG00000096221.4	novel	2183	1	NA	NA	-21	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAGGGAAAGGCACA	NA	False	NA	NA	False	NA	NA	NA	155819105	155817009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_155818296_155818841
ES.2533.1	chr10	-	2467	4	NNC	ENSMUSG00000075266.6	novel	1532	3	NA	NA	-20	16506	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1025.53043185791	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAGAGTTACATTTAT	NA	False	NA	NA	False	NA	NA	NA	30076508	30054058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30054067_30071029_30073223_30074461_30074576_30076356
ES.2533.2	chr10	-	2500	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	19	-987	19	-453	multi-exon	FALSE	canonical	3	2101	junction_1	71	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTAGTCATGG	NA	False	NA	NA	False	NA	NA	NA	30076537	30071017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30073223_30074461_30074576_30076356
ES.2533.3	chr10	-	3270	2	ISM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	41	2	-27	-2	intron_retention	FALSE	canonical	3	2101	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGAGTGATTGTACTA	NA	False	NA	NA	False	NA	NA	NA	30076515	30072006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_30073223_30074461
ES.2533.4	chr10	-	1535	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	-7	4	-7	-4	multi-exon	FALSE	canonical	3	2101	junction_1	71	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATAGAGTGATTGTAC	NA	False	NA	NA	False	NA	NA	NA	30076563	30072008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30073223_30074461_30074576_30076356
ES.2533.5	chr10	-	1428	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	-23	127	-23	-127	multi-exon	FALSE	canonical	3	2101	junction_1	71	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTAAGTTTTCA	NA	False	NA	-11	True	NA	NA	NA	30076579	30072131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30073223_30074461_30074576_30076356
ES.2533.6	chr10	-	458	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	-9	1083	-9	-1083	multi-exon	FALSE	canonical	3	2101	junction_1	71	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCTGAGTTTCTTT	NA	False	NA	-1	True	ATTAAA	-28	NA	30076565	30073087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30073223_30074461_30074576_30076356
ES.2533.7	chr10	-	3473	1	Genic_Genomic	ENSMUSG00000075266.6	novel	NA	NA	NA	NA	-7	-1086	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGGCTTCTGAGTTTC	NA	False	NA	-4	True	ATTAAA	-25	NA	30076563	30073090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_30073100_30076600
ES.2533.8	chr10	-	2172	2	ISM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	55	1086	-13	-1086	intron_retention	FALSE	canonical	3	2101	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGGCTTCTGAGTTTC	NA	False	NA	-4	True	ATTAAA	-25	NA	30076501	30073090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_30073223_30074461
ES.25330.1	chr4	-	2433	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	-18	-2	-18	2	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGATGGCTGAGGTG	NA	False	NA	-7	True	AATAAA	-21	NA	155845568	155825095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.10	chr4	-	4289	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	684	junction_3	52.173588465174	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGCTTGATGGCTGAG	NA	False	NA	-10	True	AATAAA	-18	NA	155845567	155825098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.11	chr4	-	3837	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	684	junction_4	52.3389047148062	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGCTTGATGGCTGAG	NA	False	NA	-10	True	AATAAA	-18	NA	155845530	155825098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.12	chr4	-	3693	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	13	junction_12	265.173603512869	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845543	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839500_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.13	chr4	-	3329	14	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_9	289.77348835981	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845563	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838534_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.14	chr4	-	3178	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-2	intron_retention	FALSE	canonical	1	2	junction_9	216.131206041266	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845542	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838596_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.15	chr4	-	2916	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_10	210.030221343384	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845549	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838596_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.16	chr4	-	4360	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	684	junction_4	53.3820090375858	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845542	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.17	chr4	-	2590	15	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	3	junction_3	205.111977878884	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845554	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831845_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.18	chr4	-	3587	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	684	junction_4	51.7986683305307	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845550	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.19	chr4	-	3321	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	684	junction_4	54.1676118867612	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845533	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.2	chr4	-	3189	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	684	junction_5	54.7744163491546	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTGATGGCTGAGGT	NA	False	NA	-8	True	AATAAA	-20	NA	155845544	155825096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.20	chr4	-	4324	13	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	13	junction_9	291.910505216163	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGCTTGATGGCTGA	NA	False	NA	-11	True	AATAAA	-17	NA	155845527	155825099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839500_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.21	chr4	-	6941	9	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	4	-3	intron_retention	FALSE	canonical	3	751	junction_3	39.9216028611077	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTTGCTTGATGGCTG	NA	False	NA	-12	True	AATAAA	-16	NA	155845521	155825100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155835382_155835893_155836050_155838023_155838094_155838338_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.22	chr4	-	2620	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	198.358665048946	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTTGCTTGATGGCT	NA	False	NA	-13	True	AATAAA	-15	NA	155845542	155825101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839503_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.23	chr4	-	2505	17	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	257.051969149723	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGATTTTGCTTGATGGC	NA	False	NA	-14	True	AATAAA	-14	NA	155845531	155825102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839503_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.25	chr4	-	5918	10	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-5	intron_retention	FALSE	canonical	3	759	junction_5	38.5441866043072	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGATTTTGCTTGATGGC	NA	False	NA	-14	True	AATAAA	-14	NA	155845549	155825102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.26	chr4	-	2419	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	202.99655169485	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845544	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834570_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.27	chr4	-	2674	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	3	-6	intron_retention	FALSE	canonical	2	5	junction_11	205.073667699374	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845522	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839310_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.28	chr4	-	2278	15	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	208.849130196114	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845532	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835947_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.29	chr4	-	4778	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	684	junction_3	52.9799587868644	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.3	chr4	-	3092	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	684	junction_4	53.8171350377242	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTGATGGCTGAGGT	NA	False	NA	-8	True	AATAAA	-20	NA	155845544	155825096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.31	chr4	-	6284	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	684	junction_2	48.2078831727758	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845526	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.32	chr4	-	3997	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	684	junction_3	51.3320781628867	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.33	chr4	-	3608	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	684	junction_4	55.0274552685597	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845555	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.34	chr4	-	4049	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	684	junction_4	53.1232842860203	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845531	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.35	chr4	-	4893	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	3	-6	intron_retention	FALSE	canonical	3	747	junction_3	41.8139895516109	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845522	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.36	chr4	-	4694	9	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-6	intron_retention	FALSE	canonical	1	2	junction_6	351.268927425982	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845523	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155833666_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840194_155840517_155840620_155841548_155841626_155845258
ES.25330.37	chr4	-	3105	15	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-6	intron_retention	FALSE	canonical	1	6	junction_2	209.027058594072	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845544	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.4	chr4	-	7131	9	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-17	1	intron_retention	FALSE	canonical	3	759	junction_4	37.0453691437945	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTGATGGCTGAGGT	NA	False	NA	-8	True	AATAAA	-20	NA	155845567	155825096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.40	chr4	-	2885	15	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-17	-6	intron_retention	FALSE	canonical	1	6	junction_2	207.403542862307	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845567	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.41	chr4	-	2385	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	203.418932801798	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845581	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831823_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.42	chr4	-	3765	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	29	-6	intron_retention	FALSE	canonical	3	684	junction_4	55.9502435389348	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845496	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.43	chr4	-	5965	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	684	junction_2	51.3766483920468	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845547	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.44	chr4	-	2513	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	203.418932801798	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845517	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831823_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.46	chr4	-	2386	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	202.343228753082	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845517	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840505_155840620_155841548_155841626_155845258
ES.25330.47	chr4	-	3308	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	1	1	junction_4	348.981947957197	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831770_155831939_155833127_155833284_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839500_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.48	chr4	-	2950	14	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-1042	-6	intron_retention	FALSE	canonical	3	13	junction_11	279.290076346372	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155841566	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839500_155840135_155840196_155840517_155840620_155841548
ES.25330.49	chr4	-	4410	4	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-1794	-6	intron_retention	FALSE	canonical	3	747	junction_3	47.7237420531496	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	5505	False	NA	-15	True	AATAAA	-13	NA	155835594	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155834714_155834929
ES.25330.5	chr4	-	2702	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-20	0	intron_retention	FALSE	canonical	3	684	junction_5	53.4872195301011	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845570	155825097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.50	chr4	-	5035	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-6	intron_retention	FALSE	canonical	3	684	junction_3	50.0163862038121	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845544	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.51	chr4	-	3399	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	684	junction_5	55.8795206970616	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845545	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.52	chr4	-	4482	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	684	junction_3	52.6607731123783	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.53	chr4	-	2859	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	8	-6	intron_retention	FALSE	canonical	3	684	junction_5	54.5731147367548	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845517	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.55	chr4	-	3552	14	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	12	junction_10	212.97567714003	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839503_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.57	chr4	-	2809	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	7	-6	intron_retention	FALSE	canonical	3	684	junction_4	53.2623943609487	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845537	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.58	chr4	-	4946	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	684	junction_4	52.0797998801412	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845549	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.59	chr4	-	5184	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	684	junction_2	49.8118682868071	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATTTTGCTTGATGG	NA	False	NA	-15	True	AATAAA	-13	NA	155845547	155825103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.6	chr4	-	5401	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	751	junction_3	41.0098768591177	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845539	155825097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.60	chr4	-	1928	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	233.314245578967	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTTTGCTTGATG	NA	False	NA	-16	True	AATAAA	-12	NA	155845536	155825104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.61	chr4	-	2790	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1	-7	intron_retention	FALSE	canonical	3	12	junction_12	262.559673640531	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTTTGCTTGATG	NA	False	NA	-16	True	AATAAA	-12	NA	155845549	155825104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155839386_155839503_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.62	chr4	-	2404	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	203.205927297628	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTTTGCTTGATG	NA	False	NA	-16	True	AATAAA	-12	NA	155845554	155825104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836044_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.64	chr4	-	3032	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_4	273.961522034675	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTTTGCTTGATG	NA	False	NA	-16	True	AATAAA	-12	NA	155845544	155825104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833325_155833446_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.65	chr4	-	4676	1	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	1022	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	674	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTTTGCTTGATG	NA	False	NA	-16	True	AATAAA	-12	NA	155829780	155825104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825100_155829800
ES.25330.66	chr4	-	4210	12	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	3	-10	intron_retention	FALSE	canonical	2	3	junction_3	229.176535224531	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845522	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831845_155833127_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840620_155841548_155841626_155845258
ES.25330.67	chr4	-	2592	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-3	-10	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	201.968600419856	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845547	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830787_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.69	chr4	-	4202	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-10	intron_retention	FALSE	canonical	3	684	junction_3	51.4705957049481	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845542	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.7	chr4	-	3117	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	0	intron_retention	FALSE	canonical	1	5	junction_4	244.683468996171	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845542	155825097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.70	chr4	-	5815	10	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	3	-10	intron_retention	FALSE	canonical	3	684	junction_3	53.3897849387172	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845522	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155836050_155838023_155838094_155838338_155838505_155839213_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.71	chr4	-	5620	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	23	-10	intron_retention	FALSE	canonical	3	684	junction_2	51.0642732250249	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845502	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155833666_155834588_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.72	chr4	-	2386	16	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	200.48082202545	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845539	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838344_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.73	chr4	-	6088	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	747	junction_2	40.0804975142741	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845532	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.74	chr4	-	5803	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-6	-10	intron_retention	FALSE	canonical	3	684	junction_4	54.3728767146104	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845531	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.75	chr4	-	4748	11	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-10	-10	intron_retention	FALSE	canonical	3	718	junction_2	46.3404790652837	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGATTTTGCTTG	NA	False	NA	-19	True	AATAAA	-9	NA	155845560	155825107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.76	chr4	-	3741	10	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	2	-340	intron_retention	FALSE	canonical	3	684	junction_1	51.9850405832721	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGGCCCTTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	155845542	155831998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.77	chr4	-	3139	12	NNC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	-340	intron_retention	FALSE	canonical	1	1	junction_1	301.605511052966	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGGCCCTTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	155845544	155831998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155833284_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838089_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25330.78	chr4	-	3195	1	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-1419	-366	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5880	False	NA	NA	False	NA	NA	NA	155835219	155832024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155832000_155835200
ES.25330.9	chr4	-	4513	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	684	junction_3	51.7901749584052	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845547	155825097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ES.25331.1	chr4	-	177	1	Intergenic	novelGene_21120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATATGTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	155848367	155848190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155848200_155848400
ES.25332.1	chr4	+	231	1	Intergenic	novelGene_21121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACATTC	NA	False	NA	NA	False	AATAAA	-29	NA	155862759	155862990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_155862800_155863000
ES.25333.1	chr4	+	2352	3	ISM	ENSMUSG00000078487.9	ENSMUST00000165000.8	1140	5	790	-1171	57	1171	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGTAGTCCACTAGCT	6104	False	NA	NA	False	NA	NA	NA	155875685	155878801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155875966_155876054_155876590_155877264
ES.25333.10	chr4	+	746	3	ISM	ENSMUSG00000029066.13	ENSMUST00000130188.2	442	4	-19	45	-14	-45	intron_retention	FALSE	canonical	3	1338	junction_1	30	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCATCTTGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	155888089	155891889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155888200_155888289_155888401_155891364
ES.25333.100	chr4	+	5004	8	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	41	intron_retention	FALSE	canonical	3	294	junction_5	251.778490271241	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4644	False	NA	9	True	AATAAA	-14	NA	155896964	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.102	chr4	+	4031	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	52	intron_retention	FALSE	non_canonical	0	0	junction_9	329.194714416863	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4644	False	NA	20	True	AATAAA	-25	NA	155896964	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906455_155906555_155907799
ES.25333.105	chr4	+	1665	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	7	5013	7	-2342	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAATATTAAAGATGT	4644	False	NA	NA	False	TATAAA	-13	NA	155896964	155903987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
ES.25333.106	chr4	+	3809	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-141	intron_retention	FALSE	non_canonical	0	0	junction_8	370.001297295023	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACGAGAACTCAGAATTT	4644	False	NA	13	True	AATAAA	-25	NA	155896964	155908619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.108	chr4	+	3998	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	41	intron_retention	FALSE	non_canonical	0	0	junction_8	297.048497723857	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4644	False	NA	9	True	AATAAA	-14	NA	155896964	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905556_155906268_155906378_155906461_155906555_155907799
ES.25333.109	chr4	+	3990	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	40	intron_retention	FALSE	non_canonical	0	0	junction_8	370.001297295023	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTATGTAAGACTTT	4644	False	NA	8	True	AATAAA	-13	NA	155896964	155908800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.11	chr4	+	2241	14	Fusion	ENSMUSG00000029068.17_ENSMUSG00000029066.13	novel	1894	10	NA	NA	-9	52	multi-exon	FALSE	canonical	0	0	junction_3	420.071267551692	1129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	NA	False	NA	20	True	AATAAA	-25	NA	155888094	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155888200_155888289_155888401_155891364_155891443_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.110	chr4	+	3676	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-143	intron_retention	FALSE	canonical	3	31	junction_5	320.677657469304	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACGAGAACTCAGAAT	4644	False	NA	11	True	AATAAA	-23	NA	155896964	155908617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.113	chr4	+	2208	11	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	-9	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	379.007123943601	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTTTGTGGGCTGTC	4646	False	NA	18	True	AATAAA	-23	NA	155896966	155908810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.115	chr4	+	8801	8	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-7	48	intron_retention	FALSE	canonical	3	294	junction_5	236.460205048183	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGACTTTGTGGGCTG	4648	False	NA	16	True	AATAAA	-21	NA	155896968	155908808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.116	chr4	+	2318	10	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	-7	52	intron_retention	FALSE	non_canonical	0	0	junction_7	329.037466439595	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4648	False	NA	20	True	AATAAA	-25	NA	155896968	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.117	chr4	+	5265	10	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	12	188	-6	52	intron_retention	FALSE	canonical	3	294	junction_8	236.893318699461	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4649	False	NA	20	True	AATAAA	-25	NA	155896969	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461
ES.25333.118	chr4	+	5338	9	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-6	41	intron_retention	FALSE	canonical	3	294	junction_7	248.15893974427	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4649	False	NA	9	True	AATAAA	-14	NA	155896969	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905572_155906268_155906378_155906461
ES.25333.12	chr4	+	4016	13	Fusion	ENSMUSG00000029068.17_ENSMUSG00000029066.13	novel	1894	10	NA	NA	-8	52	intron_retention	FALSE	non_canonical	0	0	junction_3	475.916367536239	1129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	NA	False	NA	20	True	AATAAA	-25	NA	155888095	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155888200_155888289_155888401_155891364_155891443_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906552_155907799
ES.25333.120	chr4	+	2817	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-4	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	384.731504530773	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4651	False	NA	9	True	AATAAA	-14	NA	155896971	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.121	chr4	+	3887	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-2	41	intron_retention	FALSE	non_canonical	0	0	junction_7	369.981013860555	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4653	False	NA	9	True	AATAAA	-14	NA	155896973	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.122	chr4	+	3504	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	354.514544107109	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTGCCATCCTGA	4653	False	NA	NA	False	ATTAAA	-17	NA	155896973	155909002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.123	chr4	+	3455	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-2	-158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	405.944261939558	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAGTAAAAGCTATAT	4653	False	NA	-4	True	AATAAA	-8	NA	155896973	155908602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904424_155904785_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.124	chr4	+	3996	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-2	50	intron_retention	FALSE	canonical	3	36	junction_7	383.427124757756	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTTTGTGGGCTGTC	4653	False	NA	18	True	AATAAA	-23	NA	155896973	155908810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907825
ES.25333.125	chr4	+	2339	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-1	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	354.687523983325	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTTGTTATGTAAGAC	4654	False	NA	5	True	AATAAA	-10	NA	155896974	155908797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.126	chr4	+	4475	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-1	52	intron_retention	FALSE	non_canonical	0	0	junction_5	418.975368458577	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4654	False	NA	20	True	AATAAA	-25	NA	155896974	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905418_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.13	chr4	+	3605	3	NIC	ENSMUSG00000029066.13	novel	764	4	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	1236	junction_2	51	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGTGAGTTATTTCC	NA	False	NA	18	True	AATAAA	-14	NA	155888096	155893284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155888200_155888289_155891443_155892935
ES.25333.130	chr4	+	3770	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-1	-153	intron_retention	FALSE	canonical	3	11	junction_2	302.943295024003	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAGCTATATACGAG	4654	False	NA	1	True	AATAAA	-13	NA	155896974	155908607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.132	chr4	+	8394	7	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	-142	intron_retention	FALSE	non_canonical	0	0	junction_5	322.890805416045	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACGAGAACTCAGAATT	4655	False	NA	12	True	AATAAA	-24	NA	155896975	155908618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155898026_155899699_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461
ES.25333.134	chr4	+	4008	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	40	intron_retention	FALSE	canonical	0	0	junction_8	297.048497723857	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTATGTAAGACTTT	4655	False	NA	8	True	AATAAA	-13	NA	155896975	155908800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905578_155906268_155906378_155906461_155906555_155907799
ES.25333.136	chr4	+	7083	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	49	intron_retention	FALSE	non_canonical	0	0	junction_6	363.349005778191	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGACTTTGTGGGCTGT	4656	False	NA	17	True	AATAAA	-22	NA	155896976	155908809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.137	chr4	+	6377	10	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	-143	intron_retention	FALSE	canonical	3	294	junction_7	219.358154623894	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACGAGAACTCAGAAT	4656	False	NA	11	True	AATAAA	-23	NA	155896976	155908617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.139	chr4	+	7209	8	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	52	intron_retention	FALSE	non_canonical	0	0	junction_5	331.007491129239	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4657	False	NA	20	True	AATAAA	-25	NA	155896977	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155904886_155905240_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.14	chr4	+	1355	3	NNC	ENSMUSG00000029066.13	novel	764	4	NA	NA	2179	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155890394	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155891258_155891301_155891443_155892935
ES.25333.140	chr4	+	5629	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	-130	intron_retention	FALSE	non_canonical	0	0	junction_7	326.053652601838	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTTGATTCTGTTA	4657	False	NA	24	True	AATAAA	-36	NA	155896977	155908630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461
ES.25333.141	chr4	+	2975	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	444.05319463936	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTATGTAAGACTTT	4657	False	NA	8	True	AATAAA	-13	NA	155896977	155908800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155903326_155903458_155904162_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.142	chr4	+	2602	13	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	2	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	428.803462815102	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTTGTTATGTAAGAC	4657	False	NA	5	True	AATAAA	-10	NA	155896977	155908797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155903326_155903458_155904162_155904424_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.147	chr4	+	2260	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-314	52	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	358.372930094885	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	5319	False	NA	20	True	AATAAA	-25	NA	155897639	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155903458_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.148	chr4	+	7385	6	NIC	ENSMUSG00000029068.17	novel	1894	10	NA	NA	1201	4	intron_retention	FALSE	canonical	3	294	junction_3	195.756583541908	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGTGCCATCCTGAAA	6834	False	NA	NA	False	ATTAAA	-19	NA	155899154	155909004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.149	chr4	+	3448	8	NNC	ENSMUSG00000029068.17	novel	1894	10	NA	NA	1777	41	intron_retention	FALSE	canonical	2	7	junction_2	332.500912995524	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	7410	False	NA	9	True	AATAAA	-14	NA	155899730	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155899821_155902379_155902445_155903043_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.15	chr4	+	4412	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-363	54	intron_retention	FALSE	non_canonical	0	0	junction_8	297.048497723857	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4262	False	NA	22	True	AATAAA	-27	NA	155896582	155908814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.150	chr4	+	3093	4	NNC	ENSMUSG00000029068.17	novel	1894	10	NA	NA	6441	-140	intron_retention	FALSE	non_canonical	0	0	junction_2	381.130773707223	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGAGAACTCAGAATTTT	NA	False	NA	14	True	AATAAA	-26	NA	155904394	155908620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155904886_155905240_155905572_155906265_155906378_155906461
ES.25333.151	chr4	+	1539	5	Fusion	ENSMUSG00000065990.13_ENSMUSG00000029068.17	novel	1029	3	NA	NA	8314	-1	intron_retention	FALSE	canonical	1	21	junction_3	897.090122284266	1227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTAGGCCGACCTAG	NA	False	NA	26	True	AATAAA	-16	NA	155906267	155917517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155906378_155906461_155906555_155907799_155908151_155916439_155917255_155917347
ES.25333.152	chr4	+	921	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	188	50	-80	19	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTGGCTTGGTGTG	NA	False	NA	46	True	AATAAA	-36	NA	155915995	155917537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
ES.25333.153	chr4	+	866	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	-44	-49	6	19	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTGGCTTGGTGTG	NA	False	NA	46	True	AATAAA	-36	NA	155916081	155917537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ES.25333.155	chr4	+	689	5	NNC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	984.660728372976	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTAGGCCGACCTAG	NA	False	NA	26	True	AATAAA	-16	NA	155916107	155917517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155916193_155916439_155916528_155916808_155916914_155917013_155917255_155917347
ES.25333.156	chr4	+	761	3	NNC	ENSMUSG00000065990.13	novel	1029	3	NA	NA	-1	2	intron_retention	FALSE	canonical	3	68	junction_1	1203.5	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGGCCGACCTAGAGT	NA	False	NA	29	True	AATAAA	-19	NA	155916120	155917520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155916528_155917073_155917255_155917347
ES.25333.157	chr4	+	1048	3	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	0	-9	intron_retention	FALSE	canonical	3	1785	junction_1	345	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916121	155917509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155916193_155916439_155917255_155917347
ES.25333.158	chr4	+	949	3	NNC	ENSMUSG00000065990.13	novel	1029	3	NA	NA	1	-9	intron_retention	FALSE	canonical	3	70	junction_1	1202.5	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCAATTATTCTAGGC	NA	False	NA	18	True	AATAAA	-8	NA	155916122	155917509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155916528_155916872_155917255_155917347
ES.25333.16	chr4	+	4731	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-131	54	intron_retention	FALSE	non_canonical	0	0	junction_7	307.454824544684	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4494	False	NA	22	True	AATAAA	-27	NA	155896814	155908814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.161	chr4	+	897	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	1112.8534894086	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGGCCGACCTAGAGT	NA	False	NA	29	True	AATAAA	-19	NA	155916123	155917520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155916224_155916349_155916528_155916808_155917255_155917347
ES.25333.162	chr4	+	877	4	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	2	13	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGTTTCTTTGGCTT	NA	False	NA	40	True	AATAAA	-30	NA	155916123	155917531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
ES.25333.163	chr4	+	1384	1	NIC	ENSMUSG00000065990.13	novel	1159	4	NA	NA	8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTAGGCCGACCTAG	NA	False	NA	26	True	AATAAA	-16	NA	155916133	155917517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155916100_155917500
ES.25333.164	chr4	+	989	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	17	44	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	1112.8534894086	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGACTAATCTGCCTCA	NA	False	NA	140	True	NA	NA	NA	155916142	155917631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155916224_155916349_155916528_155916808_155917255_155917347
ES.25333.17	chr4	+	3977	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-101	-124	intron_retention	FALSE	canonical	3	36	junction_7	322.213919624836	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATTCTGTTAGCTTAA	4524	False	NA	30	True	AATAAA	-42	NA	155896844	155908636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.19	chr4	+	3061	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-49	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	373.270424648612	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4576	False	NA	20	True	AATAAA	-25	NA	155896896	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902449_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.2	chr4	+	1184	5	Fusion	ENSMUSG00000029066.13_ENSMUSG00000078487.9	novel	810	5	NA	NA	63	-2	multi-exon	FALSE	canonical	0	0	junction_1	576.226517959734	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	6110	False	NA	20	True	AATAAA	-16	NA	155875691	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155875966_155887829_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.21	chr4	+	7179	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-20	54	intron_retention	FALSE	non_canonical	0	0	junction_6	310.40756977722	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4605	False	NA	22	True	AATAAA	-27	NA	155896925	155908814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.23	chr4	+	4819	10	NIC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	-17	41	intron_retention	FALSE	canonical	3	294	junction_7	242.274764943432	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4608	False	NA	9	True	AATAAA	-14	NA	155896928	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.24	chr4	+	1058	6	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-17	-2980	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	403.714453543591	887	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGGCATGGTGGAAAT	4608	False	NA	66	True	TATAAA	-13	NA	155896928	155903349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155903000
ES.25333.25	chr4	+	3149	13	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-13	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	391.412506187526	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTGTGGGCTGTCA	4612	False	NA	19	True	AATAAA	-24	NA	155896932	155908811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.26	chr4	+	2043	11	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	-13	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	379.007123943601	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTATATACGAGAACT	4612	False	NA	5	True	AATAAA	-17	NA	155896932	155908611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.27	chr4	+	2534	15	Fusion	ENSMUSG00000065990.13_ENSMUSG00000029068.17	novel	4220	11	NA	NA	-11	7	multi-exon	FALSE	canonical	1	7	junction_6	732.558784295827	1280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGACCTAGAGTTTCTT	4614	False	NA	34	True	AATAAA	-24	NA	155896934	155917525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155904785_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799_155908151_155916439_155916528_155916808_155917255_155917347
ES.25333.28	chr4	+	2280	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	-15	4420	-3	-1749	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACATTGTCTGACATTC	4622	False	NA	NA	False	AGTAAA	-23	NA	155896942	155904580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
ES.25333.29	chr4	+	2450	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	39	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	313.417473023911	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGTTATGTAAGACTT	4627	False	NA	7	True	AATAAA	-12	NA	155896947	155908799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.3	chr4	+	1461	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	-699	2	-56	-2	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155887278	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.31	chr4	+	6030	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	5	4	intron_retention	FALSE	non_canonical	0	0	junction_7	326.053652601838	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGTGCCATCCTGAAA	4630	False	NA	NA	False	ATTAAA	-19	NA	155896950	155909004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461
ES.25333.33	chr4	+	3858	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	-5	-130	intron_retention	FALSE	non_canonical	0	0	junction_8	297.048497723857	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTTGATTCTGTTA	4632	False	NA	24	True	AATAAA	-36	NA	155896952	155908630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.34	chr4	+	3512	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	48	intron_retention	FALSE	canonical	3	13	junction_6	371.139300216629	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGACTTTGTGGGCTG	4637	False	NA	16	True	AATAAA	-21	NA	155896957	155908808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155903458_155904162_155904424_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.37	chr4	+	6950	9	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	-140	intron_retention	FALSE	canonical	3	294	junction_6	223.795910094443	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGAGAACTCAGAATTTT	4637	False	NA	14	True	AATAAA	-26	NA	155896957	155908620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.38	chr4	+	4540	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	46	intron_retention	FALSE	non_canonical	0	0	junction_7	369.072444292178	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAAGACTTTGTGGGC	4637	False	NA	14	True	AATAAA	-19	NA	155896957	155908806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.39	chr4	+	2983	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	359.945037126595	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4637	False	NA	9	True	AATAAA	-14	NA	155896957	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.4	chr4	+	1141	5	NIC	ENSMUSG00000029066.13	novel	810	5	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	558.135064298956	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155887321	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155887553_155887829_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.40	chr4	+	2878	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	359.767693641925	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGACTTTGTGGGCTG	4637	False	NA	16	True	AATAAA	-21	NA	155896957	155908808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.41	chr4	+	4399	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	-143	intron_retention	FALSE	non_canonical	0	0	junction_7	389.31592426831	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACGAGAACTCAGAAT	4637	False	NA	11	True	AATAAA	-23	NA	155896957	155908617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.42	chr4	+	4043	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	52	intron_retention	FALSE	non_canonical	0	0	junction_8	370.908357953821	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4637	False	NA	20	True	AATAAA	-25	NA	155896957	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.43	chr4	+	5242	8	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	0	51	intron_retention	FALSE	non_canonical	0	0	junction_5	351.747010198628	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTGTGGGCTGTCA	4637	False	NA	19	True	AATAAA	-24	NA	155896957	155908811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155902445_155904785_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.44	chr4	+	1288	6	ISM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	1	5396	1	-2725	5prime_fragment	FALSE	canonical	3	604	junction_5	178.167786089405	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATGGTTGTGTTTCTAT	4638	False	NA	NA	False	AATATA	-37	NA	155896958	155903604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995
ES.25333.46	chr4	+	2244	11	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	1	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	312.668978314127	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4638	False	NA	20	True	AATAAA	-25	NA	155896958	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.47	chr4	+	4929	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	41	intron_retention	FALSE	non_canonical	0	0	junction_6	326.045985061923	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4638	False	NA	9	True	AATAAA	-14	NA	155896958	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.49	chr4	+	2251	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	48	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	303.907880779686	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGACTTTGTGGGCTG	4638	False	NA	16	True	AATAAA	-21	NA	155896958	155908808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.5	chr4	+	2550	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	-640	-1146	3	2	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCCTGAAGTTATTGT	NA	False	NA	NA	False	NA	NA	NA	155887337	155894434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.52	chr4	+	2433	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	13	-4	1	4	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGTGCCATCCTGAAA	4638	False	NA	NA	False	ATTAAA	-19	NA	155896958	155909004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.53	chr4	+	2684	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	-142	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	314.67763906723	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACGAGAACTCAGAATT	4638	False	NA	12	True	AATAAA	-24	NA	155896958	155908618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.54	chr4	+	3290	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	401.635849211572	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGTTATGTAAGACTT	4638	False	NA	7	True	AATAAA	-12	NA	155896958	155908799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.55	chr4	+	4387	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	42	intron_retention	FALSE	canonical	3	36	junction_6	328.708922232962	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTATGTAAGACTTTGT	4638	False	NA	10	True	AATAAA	-15	NA	155896958	155908802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.56	chr4	+	3495	10	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	1	58	intron_retention	FALSE	non_canonical	0	0	junction_8	329.490553265732	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGCTGTCATTCTGGT	4638	False	NA	26	True	AATAAA	-31	NA	155896958	155908818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461
ES.25333.58	chr4	+	3988	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	1	41	intron_retention	FALSE	canonical	3	11	junction_2	361.17308869848	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTATGTAAGACTTTG	4638	False	NA	9	True	AATAAA	-14	NA	155896958	155908801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.59	chr4	+	3007	13	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	390.043444873631	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTATATACGAGAACT	4639	False	NA	5	True	AATAAA	-17	NA	155896959	155908611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.6	chr4	+	979	5	NNC	ENSMUSG00000029066.13	novel	810	5	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	571.487696717961	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155887354	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155887424_155887829_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.60	chr4	+	2252	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	400.423742495021	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGTTATGTAAGACTT	4639	False	NA	7	True	AATAAA	-12	NA	155896959	155908799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904785_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.61	chr4	+	3874	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	50	intron_retention	FALSE	canonical	3	31	junction_5	320.677657469304	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTTTGTGGGCTGTC	4639	False	NA	18	True	AATAAA	-23	NA	155896959	155908810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.62	chr4	+	4588	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	51	intron_retention	FALSE	canonical	3	36	junction_6	336.47618373701	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTGTGGGCTGTCA	4639	False	NA	19	True	AATAAA	-24	NA	155896959	155908811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.64	chr4	+	3394	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	952	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	303.907880779686	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAACATG	4639	False	NA	NA	False	NA	NA	NA	155896959	155909952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.65	chr4	+	3669	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	357.650736874366	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTTTGTGGGCTGTC	4639	False	NA	18	True	AATAAA	-23	NA	155896959	155908810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904424_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.66	chr4	+	4227	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	4	intron_retention	FALSE	non_canonical	0	0	junction_8	297.048497723857	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGTGCCATCCTGAAA	4639	False	NA	NA	False	ATTAAA	-19	NA	155896959	155909004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906263_155906378_155906461_155906555_155907799
ES.25333.67	chr4	+	3840	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	56	intron_retention	FALSE	canonical	3	11	junction_2	362.567083448015	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGCTGTCATTCTG	4639	False	NA	24	True	AATAAA	-29	NA	155896959	155908816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.68	chr4	+	3995	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	2	54	intron_retention	FALSE	non_canonical	0	0	junction_8	350.684758722132	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4639	False	NA	22	True	AATAAA	-27	NA	155896959	155908814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897955_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.69	chr4	+	2054	11	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	3	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	312.668978314127	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTCAGAATTTTGATT	4640	False	NA	18	True	AATAAA	-30	NA	155896960	155908624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.7	chr4	+	1090	5	NNC	ENSMUSG00000029066.13	novel	810	5	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	576.226517959734	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	False	NA	20	True	AATAAA	-16	NA	155887354	155893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155887535_155887829_155888200_155888289_155888401_155891364_155891443_155892935
ES.25333.70	chr4	+	6591	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	52	intron_retention	FALSE	non_canonical	0	0	junction_7	296.636328036724	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4640	False	NA	20	True	AATAAA	-25	NA	155896960	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.71	chr4	+	7496	8	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	51	intron_retention	FALSE	non_canonical	0	0	junction_5	331.227155546505	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTGTGGGCTGTCA	4640	False	NA	19	True	AATAAA	-24	NA	155896960	155908811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.72	chr4	+	7106	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	59	intron_retention	TRUE	non_canonical	0	0	junction_4	326.98967401675	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCTGTCATTCTGGTT	4640	False	NA	27	True	AATAAA	-32	NA	155896960	155908819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155900469_155900508_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.74	chr4	+	4026	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	52	intron_retention	FALSE	non_canonical	0	0	junction_6	375.887070807177	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4640	False	NA	20	True	AATAAA	-25	NA	155896960	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905246_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.75	chr4	+	2917	13	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	-153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	391.412506187526	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAGCTATATACGAG	4640	False	NA	1	True	AATAAA	-13	NA	155896960	155908607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.76	chr4	+	5828	9	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	52	intron_retention	FALSE	non_canonical	0	0	junction_7	326.053652601838	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4640	False	NA	20	True	AATAAA	-25	NA	155896960	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461
ES.25333.77	chr4	+	2053	12	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	3	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	369.846517194622	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTATATACGAGAACT	4640	False	NA	5	True	AATAAA	-17	NA	155896960	155908611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902994_155903010_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.79	chr4	+	4776	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	5	intron_retention	FALSE	non_canonical	0	0	junction_7	307.454824544684	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTGCCATCCTGAAAC	4640	False	NA	NA	False	ATTAAA	-20	NA	155896960	155909005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.8	chr4	+	6822	13	Fusion	ENSMUSG00000029068.17_ENSMUSG00000029066.13	novel	1894	10	NA	NA	-22	52	intron_retention	FALSE	non_canonical	0	0	junction_4	434.746062534083	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	NA	False	NA	20	True	AATAAA	-25	NA	155888081	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935_155893166_155897624_155897700_155897915_155898026_155899699_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.80	chr4	+	3329	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	3	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	354.514544107109	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGGGCTGTCATTC	4640	False	NA	22	True	AATAAA	-27	NA	155896960	155908814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.83	chr4	+	3895	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	4	39	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	312.789053094154	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGTTATGTAAGACTT	4641	False	NA	7	True	AATAAA	-12	NA	155896961	155908799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.85	chr4	+	3521	12	NNC	ENSMUSG00000029068.17	novel	2442	11	NA	NA	6	52	intron_retention	FALSE	non_canonical	0	0	junction_9	442.73793154987	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4643	False	NA	20	True	AATAAA	-25	NA	155896963	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155903458_155904162_155904424_155904785_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.87	chr4	+	4550	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	6	40	intron_retention	FALSE	non_canonical	0	0	junction_7	442.634313855658	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTATGTAAGACTTT	4643	False	NA	8	True	AATAAA	-13	NA	155896963	155908800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905354_155905429_155905572_155906265_155906378_155906461_155906555_155907825
ES.25333.88	chr4	+	4385	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	6	-143	intron_retention	FALSE	non_canonical	0	0	junction_7	307.454824544684	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACGAGAACTCAGAAT	4643	False	NA	11	True	AATAAA	-23	NA	155896963	155908617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.9	chr4	+	5948	14	Fusion	ENSMUSG00000029068.17_ENSMUSG00000029066.13	novel	2442	11	NA	NA	-19	40	intron_retention	FALSE	non_canonical	0	0	junction_11	433.181146087227	1129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGTTATGTAAGACTTT	NA	False	NA	8	True	AATAAA	-13	NA	155888084	155908800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935_155893166_155894134_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.90	chr4	+	6239	10	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-142	intron_retention	FALSE	non_canonical	0	0	junction_7	371.302212938912	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACGAGAACTCAGAATT	4644	False	NA	12	True	AATAAA	-24	NA	155896964	155908618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.91	chr4	+	5372	7	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	48	intron_retention	FALSE	non_canonical	0	0	junction_4	366.248397797026	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGACTTTGTGGGCTG	4644	False	NA	16	True	AATAAA	-21	NA	155896964	155908808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897700_155897915_155898026_155899699_155899821_155902379_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.93	chr4	+	3713	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	358.178034128604	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACGAGAACTCAGAAT	4644	False	NA	11	True	AATAAA	-23	NA	155896964	155908617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799
ES.25333.94	chr4	+	4897	14	Fusion	ENSMUSG00000065990.13_ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	720.395354965328	1280	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTAGGCCGACCTAG	4644	False	NA	26	True	AATAAA	-16	NA	155896964	155917517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902441_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799_155908151_155915605_155916528_155916808_155917255_155917347
ES.25333.95	chr4	+	3471	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	-140	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	312.16175082429	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGAGAACTCAGAATTTT	4644	False	NA	14	True	AATAAA	-26	NA	155896964	155908620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904424_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.96	chr4	+	4109	10	NIC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	52	intron_retention	FALSE	canonical	3	294	junction_7	234.340735355408	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4644	False	NA	20	True	AATAAA	-25	NA	155896964	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.97	chr4	+	2335	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	52	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	366.689636145063	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTGGGCTGTCAT	4644	False	NA	20	True	AATAAA	-25	NA	155896964	155908812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907825
ES.25333.98	chr4	+	3192	13	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	44	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	356.394873076978	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATGTAAGACTTTGTGG	4644	False	NA	12	True	AATAAA	-17	NA	155896964	155908804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ES.25333.99	chr4	+	3018	16	Fusion	ENSMUSG00000065990.13_ENSMUSG00000029068.17	novel	4220	11	NA	NA	7	14	multi-exon	FALSE	non_canonical	0	0	junction_10	728.190988378431	1280	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGAGTTTCTTTGGCTTG	4644	False	NA	41	True	AATAAA	-31	NA	155896964	155917532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903458_155904162_155904424_155904785_155904886_155905240_155905346_155905429_155905572_155906265_155906378_155906461_155906555_155907799_155908151_155916439_155916528_155916808_155917255_155917347
ES.25334.1	chr4	-	167	1	Intergenic	novelGene_21122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155905809	155905642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_155905600_155905800
ES.25335.1	chr4	+	1692	6	NIC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	-909	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.0163514831363	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGACCTGCTGCTCT	NA	False	NA	17	True	AATAAA	-18	NA	155925851	155928550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927515_155927597_155927761
ES.25335.2	chr4	+	1906	5	NIC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	-903	-1	intron_retention	FALSE	canonical	3	23	junction_2	3.76662979332984	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAGTCTTGGACCTGC	NA	False	NA	11	True	AATAAA	-12	NA	155925857	155928544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155926004_155926118_155926590_155927013_155927439_155927515_155927597_155927761
ES.25335.3	chr4	+	1509	7	NNC	ENSMUSG00000029070.10	novel	2203	10	NA	NA	-903	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.5674351329738	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAGTCTTGGACCTG	NA	False	NA	10	True	AATAAA	-11	NA	155925857	155928543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155926004_155926118_155926414_155927084_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ES.25335.4	chr4	+	2467	4	NNC	ENSMUSG00000029070.10	novel	788	4	NA	NA	-887	5	intron_retention	FALSE	non_canonical	0	0	junction_1	15.3260852434302	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGACCTGCTGCTCT	NA	False	NA	17	True	AATAAA	-18	NA	155925873	155928550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155926692_155926747_155927173_155927249_155927439_155927515
ES.25335.5	chr4	+	1440	6	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	2113	-5	-465	5	3prime_fragment	FALSE	canonical	3	23	junction_1	4.12795348811006	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGACCTGCTGCTCT	NA	False	NA	17	True	AATAAA	-18	NA	155926295	155928550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ES.25336.1	chr4	+	3868	13	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-44	0	intron_retention	FALSE	canonical	3	98	junction_4	20.7382831712003	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931814	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.10	chr4	+	3216	12	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	43.6545416682441	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931856	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932342_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.11	chr4	+	3514	13	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	113	junction_6	17.1334630345285	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGTGTGGCTTGTTT	NA	False	NA	18	True	AAAAAG	-16	NA	155931856	155943758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.12	chr4	+	3654	13	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	15	-2	intron_retention	FALSE	canonical	3	113	junction_6	17.7544986474477	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931873	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.13	chr4	+	3835	12	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	20	0	intron_retention	FALSE	canonical	2	3	junction_10	54.9479092165728	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931878	155943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155941952_155941992_155942449
ES.25336.14	chr4	+	3686	15	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	25	0	intron_retention	FALSE	canonical	1	1	junction_13	49.3304145119253	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931883	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155941861_155941992_155942449
ES.25336.15	chr4	+	5311	8	NIC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	25	-5	intron_retention	FALSE	canonical	3	113	junction_4	21.4571238348784	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931883	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939483_155939560_155939797_155939923_155940077_155940588_155940987_155941070
ES.25336.16	chr4	+	3375	15	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	25	0	intron_retention	FALSE	canonical	2	5	junction_11	38.5097390279394	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931883	155943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940546_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.17	chr4	+	3621	13	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	26	-5	intron_retention	FALSE	canonical	3	113	junction_6	17.7849811795109	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931884	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.18	chr4	+	5742	8	NIC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	98	junction_4	23.7091216408283	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931885	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939117_155939187_155939638_155939728_155939797_155939923_155940987_155941070
ES.25336.19	chr4	+	3530	15	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	27	-1	intron_retention	FALSE	canonical	1	1	junction_13	49.2710640751957	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGTGTGGCTTGTTT	NA	False	NA	18	True	AAAAAG	-16	NA	155931885	155943758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155941861_155941992_155942449
ES.25336.2	chr4	+	3468	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-38	1	intron_retention	FALSE	canonical	3	113	junction_7	17.0970082853022	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGGCTTGTTTCTC	NA	False	NA	21	True	AAAAAG	-19	NA	155931820	155943761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.20	chr4	+	3207	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_2	40.8554965412628	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGTGTGGCTTGTTT	NA	False	NA	18	True	AAAAAG	-16	NA	155931885	155943758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.21	chr4	+	3364	16	NIC	ENSMUSG00000029071.17	novel	2776	16	NA	NA	28	-4	intron_retention	FALSE	canonical	2	3	junction_14	47.5628239512986	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTGATGTGTGGCTTG	NA	False	NA	15	True	AAAAAG	-13	NA	155931886	155943755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155941952_155941992_155942449
ES.25336.23	chr4	+	3440	16	NNC	ENSMUSG00000029071.17	novel	2776	16	NA	NA	29	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	49.4832856180302	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931887	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155934691_155934806_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.24	chr4	+	3547	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-29	-4	intron_retention	FALSE	canonical	3	98	junction_5	20.0224725816774	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTGATGTGTGGCTTG	NA	False	NA	15	True	AAAAAG	-13	NA	155931888	155943755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.25	chr4	+	5318	11	NNC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	-27	-5	intron_retention	FALSE	canonical	2	2	junction_7	45.5763096355991	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931890	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939643_155939728_155939797_155939923_155940721_155940818_155940987_155941070
ES.25336.26	chr4	+	4640	12	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	120	junction_1	16.4914202586909	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGACTGATGTGTGGCT	NA	False	NA	13	True	AAAAAG	-11	NA	155931890	155943753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.27	chr4	+	3473	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-27	-1	intron_retention	FALSE	canonical	0	0	junction_10	41.0449313622589	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGTGTGGCTTGTTT	NA	False	NA	18	True	AAAAAG	-16	NA	155931890	155943758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940002_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.29	chr4	+	4639	12	ISM	ENSMUSG00000029071.17	ENSMUST00000143457.8	3284	14	-222	0	-12	0	intron_retention	FALSE	canonical	3	113	junction_6	17.4687442248545	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931905	155943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.3	chr4	+	3906	12	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	113	junction_5	18.5365397468115	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931845	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.30	chr4	+	3543	12	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	120	junction_1	16.0185842483758	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931907	155943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.31	chr4	+	3383	13	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_9	41.9550023504018	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931913	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940002_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.32	chr4	+	3190	14	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	60.6053291151839	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931915	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932360_155937874_155937945_155938093_155938216_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939479_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.33	chr4	+	3487	12	NNC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-2	-5	intron_retention	FALSE	canonical	1	1	junction_9	43.5051056184907	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931915	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940650_155940987_155941070_155941278_155942449
ES.25336.34	chr4	+	4692	13	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	98	junction_5	20.6955443406438	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTGATGTGTGGCTTG	NA	False	NA	15	True	AAAAAG	-13	NA	155931915	155943755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.35	chr4	+	3612	13	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-2	-6	intron_retention	FALSE	canonical	0	0	junction_1	53.7819672380994	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGACTGATGTGTGGCT	NA	False	NA	13	True	AAAAAG	-11	NA	155931915	155943753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932366_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939643_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.37	chr4	+	4931	10	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	120	junction_1	16.7693135382224	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931915	155943760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.38	chr4	+	4011	15	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	9	junction_14	37.6503787551754	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931916	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941992_155942449
ES.25336.39	chr4	+	3447	13	NIC	ENSMUSG00000029071.17	novel	2776	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_1	16.2685791225499	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931917	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.40	chr4	+	3672	12	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	1	-5	intron_retention	FALSE	canonical	3	113	junction_5	17.8645037957333	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931918	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.41	chr4	+	4907	11	NNC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	2	-2	intron_retention	FALSE	canonical	2	5	junction_8	44.3797251005456	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155931919	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940546_155940721_155940818_155940987_155941070
ES.25336.42	chr4	+	3426	16	NNC	ENSMUSG00000029071.17	novel	2776	16	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_14	47.8857900518399	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931919	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155941861_155941992_155942449
ES.25336.43	chr4	+	4441	14	ISM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	84	5	20	-4	intron_retention	FALSE	canonical	3	98	junction_6	19.8836854417274	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTGATGTGTGGCTTG	NA	False	NA	15	True	AAAAAG	-13	NA	155931942	155943755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.44	chr4	+	3841	9	NNC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-28	-5	intron_retention	FALSE	canonical	1	1	junction_5	49.912266778819	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155932099	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939797_155939923_155940077_155940650_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.46	chr4	+	4640	9	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	8	-2	intron_retention	FALSE	canonical	3	120	junction_6	17.612140698961	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGATGTGTGGCTTGTT	NA	False	NA	17	True	AAAAAG	-15	NA	155937874	155943757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155937945_155938093_155938926_155939022_155939258_155939342_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.47	chr4	+	3603	9	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	31	0	intron_retention	FALSE	canonical	3	113	junction_2	19.7670021753426	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155937897	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.48	chr4	+	4481	8	NIC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	325	0	intron_retention	FALSE	canonical	3	113	junction_2	20.2887321698825	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155938191	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.5	chr4	+	3454	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	98	junction_6	19.6592270219506	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931846	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.50	chr4	+	4098	8	NNC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	-454	-5	intron_retention	FALSE	canonical	0	0	junction_5	55.0917601898535	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155938574	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155938926_155939022_155939117_155939187_155939638_155939728_155939797_155939923_155940077_155940590_155940721_155940818_155940987_155941070
ES.25336.51	chr4	+	2070	7	NNC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	731	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	73.5883822352415	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155939759	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155939797_155939923_155940077_155940650_155940721_155940818_155940987_155941070_155941278_155941861_155941992_155942449
ES.25336.6	chr4	+	3370	15	FSM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	-11	-1	-11	1	multi-exon	FALSE	canonical	3	98	junction_6	19.2953679542474	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGGCTTGTTTCTC	NA	False	NA	21	True	AAAAAG	-19	NA	155931847	155943761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.7	chr4	+	3984	11	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	113	junction_4	18.720042734994	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTGATGTGTGGCTTG	NA	False	NA	15	True	AAAAAG	-13	NA	155931850	155943755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ES.25336.8	chr4	+	5086	11	NIC	ENSMUSG00000029071.17	novel	4774	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	98	junction_4	22.1458799780004	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTGTGGCTTGTTTC	NA	False	NA	19	True	AAAAAG	-17	NA	155931853	155943759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939117_155939187_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070
ES.25336.9	chr4	+	4147	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	9	junction_13	38.8960076136873	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	False	NA	14	True	AAAAAG	-12	NA	155931855	155943754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941992_155942449
ES.25337.1	chr4	-	1527	2	Antisense	novelGene_ENSMUSG00000029071.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGATGTGATGACA	NA	False	NA	NA	False	AATAAA	-13	NA	155932379	155930127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_155931518_155932242
ES.25338.1	chr4	+	2187	1	Antisense	novelGene_ENSMUSG00000029072.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCATGTCTACATTCCCT	71	False	NA	NA	False	AATACA	-38	NA	155943924	155946111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_155943900_155946100
ES.25339.1	chr4	+	2271	17	NNC	ENSMUSG00000029034.10	novel	481	4	NA	NA	-507	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	236.490742088882	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9453	False	NA	31	True	AATAAA	-19	NA	155953495	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155953809_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.10	chr4	+	2265	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	intron_retention	FALSE	canonical	0	0	junction_8	247.445257694617	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970679_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.11	chr4	+	2433	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	774	junction_2	70.4630399571293	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCACTGTGTACCGTCA	9980	False	NA	21	True	AATAAA	-21	NA	155954022	155973560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.12	chr4	+	1849	15	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	335.382609713084	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155969554_155969654_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.13	chr4	+	2589	12	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	intron_retention	FALSE	canonical	2	16	junction_3	272.358659986095	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155972567_155972640_155972983_155973076
ES.25339.14	chr4	+	2182	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	intron_retention	FALSE	canonical	3	774	junction_2	74.2831220548936	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972983_155973076
ES.25339.15	chr4	+	1834	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	323.996296275127	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971304_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.16	chr4	+	1763	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	326.822275862586	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971935_155972363_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.17	chr4	+	2285	15	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	intron_retention	FALSE	canonical	3	774	junction_2	72.5354241395336	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.18	chr4	+	2346	13	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	135	intron_retention	FALSE	canonical	2	16	junction_3	261.126831678061	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9980	False	NA	31	True	AATAAA	-19	NA	155954022	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155972567_155972640_155972983_155973076
ES.25339.19	chr4	+	3685	9	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	132	intron_retention	FALSE	canonical	3	774	junction_2	84.9631353882376	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTTTTATTCCTAC	9980	False	NA	28	True	AATAAA	-16	NA	155954022	155973322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155970161_155970548_155971979_155972061_155972567_155972640_155972983_155973076
ES.25339.2	chr4	+	2177	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	-43	234	-43	136	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9917	False	NA	32	True	AATAAA	-20	NA	155953959	155973326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.21	chr4	+	2040	17	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	1	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	237.973204570914	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	9982	False	NA	30	True	AATAAA	-18	NA	155954024	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972922_155972983_155973076
ES.25339.23	chr4	+	2058	17	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	3	134	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	234.161803033714	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	9984	False	NA	30	True	AATAAA	-18	NA	155954026	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971304_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.24	chr4	+	1846	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	5	134	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	247.894457828775	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	9986	False	NA	30	True	AATAAA	-18	NA	155954028	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971934_155972363_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.25	chr4	+	2250	17	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_3	235.974434195211	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCACTGTGTACCGTCA	9987	False	NA	21	True	AATAAA	-21	NA	155954029	155973560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.26	chr4	+	2220	15	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	13	134	intron_retention	FALSE	canonical	3	24	junction_8	245.124302078329	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	9994	False	NA	30	True	AATAAA	-18	NA	155954036	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971304_155971445_155971572_155971657_155971888_155971979_155972061_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.28	chr4	+	1895	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-23	132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	323.213214801348	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTTTTATTCCTAC	NA	False	NA	28	True	AATAAA	-16	NA	155954048	155973322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.29	chr4	+	2412	15	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-23	134	intron_retention	FALSE	canonical	3	774	junction_2	79.1143901872085	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	NA	False	NA	30	True	AATAAA	-18	NA	155954048	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.3	chr4	+	2235	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-16	131	intron_retention	FALSE	canonical	3	774	junction_2	77.481868846847	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTCTTTTATTCCTA	9944	False	NA	27	True	AATAAA	-15	NA	155953986	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.30	chr4	+	2020	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-23	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	244.007340508892	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGTCTTTTATTCCT	NA	False	NA	26	True	AATAAA	-14	NA	155954048	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972640_155972784_155972852_155972983_155973076
ES.25339.31	chr4	+	2248	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-8	-5	intron_retention	FALSE	canonical	2	16	junction_3	322.233704009993	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATCTCCACTGTGTAC	NA	False	NA	16	True	AATAAA	-16	NA	155954063	155973555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971304_155971445_155971572_155971657_155971888_155971979_155972061_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.32	chr4	+	1958	16	ISM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	2580	236	2511	134	3prime_fragment	FALSE	canonical	3	774	junction_1	70.9430444480328	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	NA	False	NA	30	True	AATAAA	-18	NA	155956582	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.33	chr4	+	1893	13	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	5659	135	intron_retention	FALSE	canonical	3	829	junction_1	60.7652015731226	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	NA	False	NA	31	True	AATAAA	-19	NA	155959730	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155959824_155969554_155969654_155969743_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.34	chr4	+	1286	10	ISM	ENSMUSG00000029034.10	ENSMUST00000120794.8	1884	17	16544	-183	-1689	135	3prime_fragment	FALSE	canonical	3	892	junction_7	55.5277708298589	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	7988	False	NA	31	True	AATAAA	-19	NA	155970546	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.4	chr4	+	2379	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	-5	-6	-5	6	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTACCGTCATCTAGT	9955	False	NA	27	True	AATAAA	-27	NA	155953997	155973566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.5	chr4	+	2025	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-1	134	combination_of_known_splicesites	FALSE	canonical	3	8	junction_12	241.994673954247	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTTTTATTCCTACTC	9959	False	NA	30	True	AATAAA	-18	NA	155954001	155973324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ES.25339.7	chr4	+	2368	14	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	3	132	intron_retention	FALSE	canonical	3	774	junction_2	70.736112652139	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTTTTATTCCTAC	9963	False	NA	28	True	AATAAA	-16	NA	155954005	155973322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972567_155972640_155972983_155973076
ES.25339.8	chr4	+	2154	16	NNC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	10	135	intron_retention	FALSE	non_canonical	0	0	junction_3	417.994811238396	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTTATTCCTACTCT	9970	False	NA	31	True	AATAAA	-19	NA	155954012	155973325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959636_155959681_155959745_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971304_155971445_155971540_155971657_155971888_155971979_155972061_155972420_155972504_155972567_155972640_155972983_155973076
ES.25339.9	chr4	+	3723	10	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	-2	127	intron_retention	FALSE	canonical	3	774	junction_2	87.546953892197	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTATGTCTTTTATT	9979	False	NA	23	True	AATAAA	-11	NA	155954021	155973317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155971445_155971572_155971657_155971888_155972567_155972640_155972784_155972852_155972983_155973076
ES.2534.1	chr10	+	1877	1	Intergenic	novelGene_1924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTCTACTGTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30099548	30101425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30099500_30101400
ES.25340.1	chr4	+	4385	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	17.9093216413379	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976262	155991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.10	chr4	+	3679	22	NNC	ENSMUSG00000029033.17	novel	4101	22	NA	NA	-9	-485	intron_retention	FALSE	canonical	0	0	junction_9	18.3306738949275	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTCTTTTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	155976719	155991222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.11	chr4	+	3869	22	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2900283260133	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976719	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.12	chr4	+	3905	21	NNC	ENSMUSG00000029033.17	novel	4101	22	NA	NA	-8	-491	intron_retention	FALSE	non_canonical	0	0	junction_9	18.7810409722145	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTGCGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	155976720	155991216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984826_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.13	chr4	+	4516	21	NNC	ENSMUSG00000029033.17	novel	4101	22	NA	NA	-8	-1	intron_retention	TRUE	canonical	0	0	junction_8	23.3162496984399	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTGCCTGCTCATTGC	NA	False	NA	9	True	AATAAA	-14	NA	155976720	155991706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987771_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.14	chr4	+	4188	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_10	23.9453579068941	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976720	155991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980034_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989977_155990064_155990176_155990269
ES.25340.15	chr4	+	4233	21	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-7	-491	intron_retention	FALSE	canonical	0	0	junction_7	22.7298812139439	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTCTGCGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	155976721	155991216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987925_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.16	chr4	+	5027	19	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	23.7273608798153	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTGCCTGCTCATTGC	NA	False	NA	9	True	AATAAA	-14	NA	155976721	155991706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989378_155989469_155990176_155990269
ES.25340.17	chr4	+	4250	21	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_9	22.798026230356	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976721	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987771_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155990176_155990269
ES.25340.18	chr4	+	4010	24	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.6964100397353	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976721	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980034_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.19	chr4	+	4023	24	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.9010246476181	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGCTGCCTGCTCATTG	NA	False	NA	8	True	AATAAA	-13	NA	155976721	155991705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980049_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.2	chr4	+	3853	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-23	-485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.9093216413379	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTCTTTTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	155976308	155991222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.20	chr4	+	4163	22	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_9	18.3285708099816	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976724	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.21	chr4	+	3449	24	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-4	-499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.9010246476181	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGACTTTGTCTGCG	NA	False	NA	NA	False	NA	NA	NA	155976724	155991208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155979975_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.22	chr4	+	4114	22	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_9	22.2638272661092	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCGCTGCCTGCTCATT	NA	False	NA	7	True	AATAAA	-12	NA	155976724	155991704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155987925_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.23	chr4	+	4158	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5397000370467	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTGCCTGCTCATTGC	NA	False	NA	9	True	AATAAA	-14	NA	155976725	155991706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155977137_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.24	chr4	+	4024	21	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-3	-496	intron_retention	FALSE	canonical	0	0	junction_8	18.7656601269446	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGACTTTGTCTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	155976725	155991211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.25	chr4	+	4247	21	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_9	23.2561282246207	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACCGCTGCCTGCTCAT	NA	False	NA	6	True	AATAAA	-11	NA	155976725	155991703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987487_155987595_155987691_155987771_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.26	chr4	+	3455	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-3	-485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.9093216413379	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTCTTTTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	155976725	155991222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986097_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.27	chr4	+	4050	25	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0190902138325	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTGCCTGCTCATTGC	NA	False	NA	9	True	AATAAA	-14	NA	155976726	155991706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980034_155980106_155980153_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.28	chr4	+	3704	22	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.7113754966935	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976731	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155984415_155984461_155984545_155984642_155984743_155984819_155986097_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987925_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.29	chr4	+	4155	22	NNC	ENSMUSG00000029033.17	novel	4101	22	NA	NA	13	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	22.6833671969637	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTGCCTGCTCATTGC	NA	False	NA	9	True	AATAAA	-14	NA	155976741	155991706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983859_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.3	chr4	+	8530	19	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-95	-2	intron_retention	FALSE	canonical	0	0	junction_6	17.5594229214212	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGCTGCCTGCTCATTG	NA	False	NA	8	True	AATAAA	-13	NA	155976633	155991705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064
ES.25340.30	chr4	+	4099	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_2	23.8206105631931	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976742	155991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980055_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155990176_155990269
ES.25340.31	chr4	+	3998	22	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_9	17.8980483867494	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976743	155991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064
ES.25340.32	chr4	+	4241	20	NNC	ENSMUSG00000029033.17	novel	4101	22	NA	NA	17	-496	intron_retention	FALSE	canonical	0	0	junction_8	19.2528013574857	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGACTTTGTCTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	155976745	155991211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.33	chr4	+	7219	19	NIC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	2225	0	intron_retention	FALSE	canonical	3	47	junction_8	11.5737036977776	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155978993	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155986245_155986332_155986385_155986588_155986690_155986761_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.4	chr4	+	4242	22	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-14	-2	intron_retention	FALSE	canonical	0	0	junction_8	22.2656604929701	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGCTGCCTGCTCATTG	NA	False	NA	8	True	AATAAA	-13	NA	155976714	155991705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987925_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.5	chr4	+	4549	23	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_9	21.0491357471626	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976716	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.6	chr4	+	3957	24	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.9010246476181	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCTGCTCATTGCCT	NA	False	NA	11	True	AATAAA	-16	NA	155976716	155991708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155979948_155979975_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.7	chr4	+	3813	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.9990608364528	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCGCTGCCTGCTCATT	NA	False	NA	7	True	AATAAA	-12	NA	155976716	155991704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155983944_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.8	chr4	+	3421	23	NNC	ENSMUSG00000029033.17	novel	4301	23	NA	NA	-9	-497	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.9093216413379	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGACTTTGTCTGCGTC	NA	False	NA	NA	False	NA	NA	NA	155976719	155991210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986125_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ES.25340.9	chr4	+	4682	18	NNC	ENSMUSG00000029033.17	novel	4365	24	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	23.0741245752357	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976719	155991707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_155976901_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155987487_155987595_155987691_155987767_155988316_155989284_155989384_155989469_155989691_155989866
ES.25341.1	chr4	-	3946	2	ISM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	15	530	15	43	intron_retention	FALSE	canonical	3	76	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTGTCAGGTGCCTA	NA	False	NA	0	True	AATAAA	-41	NA	155953882	155949709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_155951343_155951569
ES.25341.2	chr4	-	2169	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	-37	530	-37	43	multi-exon	FALSE	canonical	3	76	junction_1	2.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTGTCAGGTGCCTA	NA	False	NA	0	True	AATAAA	-41	NA	155953934	155949709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155951343_155951569_155951795_155953623
ES.25341.3	chr4	-	2330	2	NIC	ENSMUSG00000029073.10	novel	2662	3	NA	NA	2	16	intron_retention	FALSE	canonical	3	81	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGTATAGCATTCTGGG	NA	False	NA	-27	True	AATAAA	-14	NA	155953895	155949736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155951795_155953623
ES.25341.4	chr4	-	2033	4	NNC	ENSMUSG00000029073.10	novel	2662	3	NA	NA	15	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0615104327327	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGTATAGCATTCTGGG	NA	False	NA	-27	True	AATAAA	-14	NA	155953882	155949736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155950853_155950909_155951343_155951569_155951795_155953623
ES.25342.1	chr4	-	7003	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	14	4496	intron_retention	FALSE	canonical	3	268	junction_3	39.1822663969301	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTGGCCTCTTTTC	9149	False	NA	NA	False	NA	NA	NA	155976169	155967839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975873_155976087
ES.25342.10	chr4	-	2031	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	293	junction_4	40.5679676592259	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9139	False	NA	NA	False	AATAAA	-14	NA	155976179	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.11	chr4	-	1217	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	24	2	-2	-2	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9104	False	NA	NA	False	AATAAA	-12	NA	155976214	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.12	chr4	-	2038	6	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	21	junction_2	128.530152104477	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9107	False	NA	NA	False	AATAAA	-12	NA	155976211	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155975127_155975232_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.13	chr4	-	1694	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	121.196248342285	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9089	False	NA	NA	False	AATAAA	-12	NA	155976229	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974643_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.14	chr4	-	1126	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	122.959923784715	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9145	False	NA	NA	False	AATAAA	-12	NA	155976173	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976137
ES.25342.15	chr4	-	2400	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	293	junction_4	34.3684084589322	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGGTCTGTTTATTA	9060	False	NA	NA	False	AATAAA	-12	NA	155976258	155973320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975697_155975814
ES.25342.16	chr4	-	1981	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	8	-3	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9114	False	NA	NA	False	AATAAA	-11	NA	155976204	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.17	chr4	-	2036	7	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_4	162.016460069134	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9108	False	NA	NA	False	AATAAA	-11	NA	155976210	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975350_155975508_155975697_155975814_155975873_155976028
ES.25342.18	chr4	-	2300	4	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	7	-3	intron_retention	FALSE	canonical	3	293	junction_2	29.7097066068763	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9099	False	NA	NA	False	AATAAA	-11	NA	155976219	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155975697_155975814_155975873_155976087
ES.25342.20	chr4	-	1347	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	157.979590518548	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9149	False	NA	NA	False	AATAAA	-11	NA	155976169	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975821_155975873_155976087
ES.25342.21	chr4	-	2275	5	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	1	-3	intron_retention	FALSE	canonical	3	293	junction_4	36.8917334913934	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9107	False	NA	NA	False	AATAAA	-11	NA	155976211	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814
ES.25342.22	chr4	-	2894	1	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-3	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9103	False	NA	NA	False	AATAAA	-11	NA	155976215	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973300_155976200
ES.25342.23	chr4	-	2157	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	293	junction_4	37.5126645281297	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9087	False	NA	NA	False	AATAAA	-11	NA	155976231	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975697_155975814_155975873_155976087
ES.25342.24	chr4	-	1386	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	118.182321962677	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9117	False	NA	NA	False	AATAAA	-11	NA	155976201	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.25	chr4	-	1607	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	153.267673016317	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAAGGTCTGTTTATT	9137	False	NA	NA	False	AATAAA	-11	NA	155976181	155973321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974643_155974955_155975127_155975209_155975360_155975508_155975659_155975814_155975873_155976087
ES.25342.3	chr4	-	1347	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	2	1	intron_retention	FALSE	canonical	1	7	junction_2	142.668286595165	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGTTTATTACTT	9137	False	NA	NA	False	AATAAA	-15	NA	155976181	155973317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974955_155975127_155975209_155975360_155975508_155975697_155975814
ES.25342.4	chr4	-	2209	5	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	3	0	intron_retention	FALSE	canonical	2	30	junction_4	149.504807615006	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9138	False	NA	NA	False	AATAAA	-14	NA	155976180	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975659_155975814
ES.25342.5	chr4	-	1705	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	155.150354988512	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9139	False	NA	NA	False	AATAAA	-14	NA	155976179	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155974643_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
ES.25342.6	chr4	-	2715	5	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-433	0	intron_retention	FALSE	canonical	3	21	junction_2	142.964156346967	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	8647	False	NA	NA	False	AATAAA	-14	NA	155976671	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155975127_155975232_155975360_155975508_155975697_155975814
ES.25342.7	chr4	-	1977	7	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	21	junction_3	121.92951060164	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9098	False	NA	NA	False	AATAAA	-14	NA	155976220	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975232_155975360_155975508_155975697_155975814_155975873_155976087
ES.25342.8	chr4	-	2072	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	21	junction_6	128.003146662711	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9085	False	NA	NA	False	AATAAA	-14	NA	155976233	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976028
ES.25342.9	chr4	-	2631	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	-398	0	intron_retention	FALSE	canonical	3	293	junction_5	33.0357382239296	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	8682	False	NA	NA	False	AATAAA	-14	NA	155976636	155973318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814
ES.25343.1	chr4	+	173	2	Intergenic	novelGene_21123	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	521	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGAAAG	-2	True	NA	NA	False	NA	NA	NA	156012811	156054241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156012894_156054150
ES.25343.10	chr4	+	5919	4	NIC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	344	junction_1	315.640090398331	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATACTCTGTGTGTGTT	758	False	NA	32	True	TATAAA	-14	NA	156028288	156042166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028471_156033463_156033595_156035928_156040906_156041537
ES.25343.11	chr4	+	1447	8	NNC	ENSMUSG00000023286.17	novel	1434	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	408.183682142423	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	762	False	NA	34	True	TATAAA	-16	NA	156028292	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
ES.25343.12	chr4	+	6055	4	NIC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	5	1	intron_retention	FALSE	canonical	3	339	junction_1	317.979384377178	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	762	False	NA	35	True	TATAAA	-17	NA	156028292	156042169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028608_156033463_156033595_156035928_156040906_156041537
ES.25343.14	chr4	+	2961	4	ISM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	5	1897	5	-4	intron_retention	FALSE	canonical	3	339	junction_1	369.542960966651	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAATACTCTGTGTGTG	762	False	NA	30	True	TATAAA	-12	NA	156028292	156042164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690
ES.25343.15	chr4	+	1817	14	Fusion	ENSMUSG00000023571.5_ENSMUSG00000023286.17	novel	1434	8	NA	NA	-9	0	multi-exon	FALSE	canonical	1	2	junction_7	491.872692433855	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGCACTCTGCTTAT	767	False	NA	10	True	AATAAA	-24	NA	156028297	156051086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537_156041792_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ES.25343.17	chr4	+	1364	7	NNC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	-9	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	417.124048961723	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTT	767	False	NA	23	True	AGTAAA	-14	NA	156028297	156042100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028608_156033463_156033595_156035928_156035974_156039698_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.18	chr4	+	5129	7	NNC	ENSMUSG00000023286.17	novel	1434	8	NA	NA	-8	-3	intron_retention	FALSE	canonical	1	2	junction_2	435.465906306746	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	768	False	NA	31	True	TATAAA	-13	NA	156028298	156042165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028471_156030711_156030825_156033463_156033595_156035928_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.2	chr4	+	199	1	Intergenic	novelGene_21124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTTCTTTCTTTCTTT	778	False	NA	NA	False	NA	NA	NA	156015479	156015678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156015500_156015700
ES.25343.20	chr4	+	2175	12	Fusion	ENSMUSG00000023571.5_ENSMUSG00000023286.17	novel	1434	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	2	junction_7	498.408525058751	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCGCTCTTGGGTGCAC	768	False	NA	1	True	AATAAA	-15	NA	156028298	156051077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537_156041792_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322
ES.25343.21	chr4	+	6591	4	NIC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	339	junction_1	353.782419009198	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	769	False	NA	31	True	TATAAA	-13	NA	156028299	156042165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028608_156033463_156033595_156035928_156039794_156039878
ES.25343.23	chr4	+	1409	7	NNC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	407.279865557934	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	771	False	NA	31	True	TATAAA	-13	NA	156028301	156042165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
ES.25343.24	chr4	+	2345	6	NIC	ENSMUSG00000023286.17	novel	1434	8	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	230	junction_1	367.266442790517	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAAATACTCTGTGTGT	771	False	NA	29	True	TATAAA	-11	NA	156028301	156042163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156040906_156041537
ES.25343.26	chr4	+	1539	8	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	437.933365539852	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAATACTCTGTGTGTG	773	False	NA	30	True	TATAAA	-12	NA	156028303	156042164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028608_156030711_156030825_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.27	chr4	+	1757	9	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	460.6231512853	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	776	False	NA	34	True	TATAAA	-16	NA	156028306	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028608_156029231_156029399_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.29	chr4	+	3755	6	NIC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	339	junction_1	298.165457422553	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	782	False	NA	34	True	TATAAA	-16	NA	156028312	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028608_156033463_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.3	chr4	+	177	2	Intergenic	novelGene_21125	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	521	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGGG	778	False	NA	NA	False	NA	NA	NA	156015479	156054243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156015498_156054084
ES.25343.30	chr4	+	2472	6	NIC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	207	junction_1	374.148312838639	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	783	False	NA	31	True	TATAAA	-13	NA	156028313	156042165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156040906_156041537
ES.25343.31	chr4	+	1293	7	NNC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	443.297116315156	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	783	False	NA	34	True	TATAAA	-16	NA	156028313	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040028_156040824_156040906_156041537
ES.25343.32	chr4	+	4978	6	NNC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	66	junction_3	395.456192264074	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCAAATACTCTGTGTG	783	False	NA	28	True	TATAAA	-10	NA	156028313	156042162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028471_156033463_156033595_156035928_156039794_156039898_156040018_156040824_156040906_156041537
ES.25343.33	chr4	+	1074	6	NIC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	-1	-67	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	453.438154548115	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTC	786	False	NA	24	True	AGTAAA	-15	NA	156028316	156042101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156040824_156040906_156041537
ES.25343.34	chr4	+	2089	15	Fusion	ENSMUSG00000023571.5_ENSMUSG00000023286.17	novel	3483	8	NA	NA	-1	-1	multi-exon	FALSE	canonical	1	2	junction_8	477.34756087944	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCGCTCTTGGGTGCAC	786	False	NA	1	True	AATAAA	-15	NA	156028316	156051077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537_156041792_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ES.25343.36	chr4	+	241	1	NIC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	1	-5001	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCGTTGGTTACGTCGC	796	False	NA	NA	False	NA	NA	NA	156028326	156028567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156028300_156028600
ES.25343.38	chr4	+	1465	8	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	19	-67	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	412.017980586443	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTC	814	False	NA	24	True	AGTAAA	-15	NA	156028344	156042101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
ES.25343.39	chr4	+	1301	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	11	3	11	-3	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTGCACTCTGCT	NA	False	NA	7	True	AATAAA	-21	NA	156046785	156051083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ES.25343.4	chr4	+	210	2	Antisense	novelGene_ENSMUSG00000088545.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	909	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACCATCATT	780	False	NA	NA	False	NA	NA	NA	156015481	156109391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_+_156015498_156109197
ES.25343.40	chr4	+	257	1	Intergenic	novelGene_21126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATTCTCAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	156054066	156054323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156054100_156054300
ES.25343.41	chr4	+	3737	1	Genic_Genomic	ENSMUSG00000029076.15	novel	NA	NA	NA	NA	-1181	-5558	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAACTGTGGTGGTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	156076147	156079884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_156076100_156079900
ES.25343.42	chr4	+	3040	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	-1188	3325	-1149	-33	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTTTCAGTTGTTA	NA	False	NA	103	True	NA	NA	NA	156076179	156094742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.43	chr4	+	1976	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-216	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	254.552749034098	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077112	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077339_156077392_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.44	chr4	+	1521	8	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	-105	-2	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_2	326.008263323343	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077223	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077320_156077389_156077464_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.45	chr4	+	1771	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	-103	2	-103	-2	multi-exon	FALSE	canonical	3	37	junction_1	241.738769445576	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077225	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.46	chr4	+	1720	9	NNC	ENSMUSG00000029076.15	novel	1670	8	NA	NA	-75	45	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	302.534192282459	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATGAGCTGAGCTGCAT	NA	False	NA	73	True	NA	NA	NA	156077253	156094712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077320_156077389_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.47	chr4	+	5221	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-69	6	intron_retention	FALSE	canonical	1	15	junction_1	249.356232350918	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACGTGTGTGTTTCTT	NA	False	NA	12	True	NA	NA	NA	156077259	156098073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077320_156077389_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.48	chr4	+	1803	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-61	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	254.552749034098	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGTCCTCTCCAGCA	NA	False	NA	24	True	ATTAAA	-15	NA	156077267	156094663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077289_156077358_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.49	chr4	+	5120	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	-52	-3398	-52	-2	multi-exon	FALSE	canonical	3	37	junction_1	241.738769445576	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTGTGCACGTGTG	NA	False	NA	4	True	NA	NA	NA	156077276	156098065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.5	chr4	+	1326	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	-17	0	-17	0	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	740	False	NA	34	True	TATAAA	-16	NA	156028270	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.50	chr4	+	1787	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-44	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	254.552749034098	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTCCTCTCCAGCAT	NA	False	NA	25	True	ATTAAA	-16	NA	156077284	156094664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077304_156077373_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.51	chr4	+	5242	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	-65	0	-26	0	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTGCACGTGTGTG	NA	False	NA	6	True	NA	NA	NA	156077302	156098067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.52	chr4	+	1769	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-25	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	254.552749034098	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077303	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077312_156077381_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.53	chr4	+	2720	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	-56	2513	-17	779	multi-exon	FALSE	canonical	3	674	junction_3	38.3521692853076	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCCAGCAATACATTGT	NA	False	NA	NA	False	NA	NA	NA	156077311	156095554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.54	chr4	+	5114	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	16	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	254.552749034098	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGCCTGTGTGCACGT	NA	False	NA	1	True	NA	NA	NA	156077344	156098062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156094779_156094859
ES.25343.55	chr4	+	1223	5	NNC	ENSMUSG00000029076.15	novel	973	5	NA	NA	-15	236	intron_retention	FALSE	canonical	0	0	junction_4	300.755714825172	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAACCCTAA	NA	False	NA	NA	False	NA	NA	NA	156077352	156087392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156087189
ES.25343.58	chr4	+	6590	12	Fusion	ENSMUSG00000029076.15_ENSMUSG00000029075.7	novel	5177	7	NA	NA	47	1	intron_retention	FALSE	canonical	0	0	junction_8	359.098204759028	336	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGGCTGAGGTGGCCTCC	NA	False	NA	NA	False	AATAAA	-32	NA	156077414	156101070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156098808_156099358_156099467_156099842_156099910_156100334_156100532_156100634_156100731_156100818
ES.25343.59	chr4	+	3897	3	NNC	ENSMUSG00000029076.15	novel	973	5	NA	NA	71	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	342	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGCCTGTGTGCACGT	NA	False	NA	1	True	NA	NA	NA	156077438	156098062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080762_156094634
ES.25343.6	chr4	+	2089	1	Genic_Genomic	ENSMUSG00000023286.17	novel	NA	NA	NA	NA	-17	-3209	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGAAAATGTATGTATT	740	False	NA	NA	False	NA	NA	NA	156028270	156030359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_+_156028300_156030400
ES.25343.60	chr4	+	4894	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-20	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	254.552749034098	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCCTGTGTGCACGTGT	NA	False	NA	3	True	NA	NA	NA	156077606	156098064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156095357_156095397
ES.25343.62	chr4	+	1365	6	NIC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	288.408044270613	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077618	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093600_156093777_156094230
ES.25343.63	chr4	+	1165	4	ISM	ENSMUSG00000029076.15	ENSMUST00000097734.11	973	5	-5	1502	-5	212	5prime_fragment	FALSE	canonical	3	674	junction_3	20.6774165590278	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTCGAGTCCAAGACC	NA	False	NA	NA	False	AATAAA	-15	NA	156077621	156085654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126
ES.25343.64	chr4	+	4876	8	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-5	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	254.552749034098	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAATGCCTGTGTGCACG	NA	False	NA	0	True	NA	NA	NA	156077621	156098061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156095369_156095409
ES.25343.65	chr4	+	1552	7	NNC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	265.438421400436	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGTCCTCTCCAGCA	NA	False	NA	24	True	ATTAAA	-15	NA	156077622	156094663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094196
ES.25343.66	chr4	+	7245	5	NIC	ENSMUSG00000029076.15	novel	1654	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	674	junction_1	42.4322990185543	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077630	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.67	chr4	+	3957	3	NIC	ENSMUSG00000029076.15	novel	973	5	NA	NA	82	212	intron_retention	FALSE	canonical	3	674	junction_2	5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTCGAGTCCAAGACC	NA	False	NA	NA	False	AATAAA	-15	NA	156077708	156085654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156077792_156080645_156083992_156085126
ES.25343.68	chr4	+	1569	7	FSM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	-25	110	-25	-2	multi-exon	FALSE	canonical	3	13	junction_1	268.571995313485	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156077808	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156078027_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ES.25343.69	chr4	+	1768	5	ISM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	2849	110	2849	-2	intron_retention	FALSE	canonical	3	674	junction_2	30.8585482484189	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCCTCTCCAGCATG	NA	False	NA	26	True	ATTAAA	-17	NA	156080682	156094665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600
ES.25343.7	chr4	+	1459	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	-13	1893	-13	0	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	744	False	NA	34	True	TATAAA	-16	NA	156028274	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.70	chr4	+	1734	12	Fusion	ENSMUSG00000029076.15_ENSMUSG00000029075.7	novel	1670	8	NA	NA	2951	0	multi-exon	FALSE	canonical	0	0	junction_8	362.292220303669	335	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGGCTGAGGTGGCCTC	NA	False	NA	NA	False	AATAAA	-31	NA	156080784	156101069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156094346_156098684_156098808_156099358_156099467_156099842_156099910_156100334_156100532_156100634_156100731_156100818
ES.25343.71	chr4	+	1980	3	FSM	ENSMUSG00000029076.15	ENSMUST00000149971.2	696	3	-919	-365	-919	12	multi-exon	FALSE	canonical	3	759	junction_1	10.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTGTCTGAGGCAGTA	NA	False	NA	40	True	ATTAAA	-31	NA	156092047	156094679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156093403_156093600_156093777_156094230
ES.25343.72	chr4	+	611	2	ISM	ENSMUSG00000029076.15	ENSMUST00000149971.2	696	3	633	-350	633	-3	3prime_fragment	FALSE	canonical	3	780	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGTCCTCTCCAGCAT	NA	False	NA	25	True	ATTAAA	-16	NA	156093599	156094664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156093777_156094230
ES.25343.73	chr4	+	4720	7	Fusion	ENSMUSG00000029076.15_ENSMUSG00000029075.7	novel	1030	7	NA	NA	1822	0	intron_retention	TRUE	non_canonical	0	0	junction_1	1.82574185835055	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGGCTGAGGTGGCCTC	NA	False	NA	NA	False	AATAAA	-31	NA	156094788	156101069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_+_156095349_156095390_156098808_156099358_156099467_156099842_156099910_156100334_156100532_156100610_156100731_156100818
ES.25343.75	chr4	+	179	1	Intergenic	novelGene_21127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	156102692	156102871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156102700_156102900
ES.25343.76	chr4	+	160	1	Intergenic	novelGene_21128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	156108406	156108566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156108400_156108600
ES.25343.77	chr4	+	183	1	Intergenic	novelGene_21129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	156109178	156109361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156109200_156109400
ES.25343.8	chr4	+	1484	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	-49	-1	-11	1	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCTGTGTGTGTTCTT	746	False	NA	35	True	TATAAA	-17	NA	156028276	156042169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25343.9	chr4	+	1613	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	-23	1893	-4	0	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	753	False	NA	34	True	TATAAA	-16	NA	156028283	156042168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ES.25344.1	chr4	-	163	1	Antisense	novelGene_ENSMUSG00000023286.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTTTAAAATCAAA	7160	False	NA	NA	False	NA	NA	NA	156043630	156043467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156043500_156043600
ES.25345.1	chr4	-	3258	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-72	-2	-72	2	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGATTCTTCCTTT	7138	False	NA	NA	False	TTTAAA	-22	NA	156077178	156073920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156073900_156077200
ES.25345.2	chr4	-	2063	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-80	1201	-80	-1201	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGTGAGCGTATG	7130	False	NA	NA	False	TTTAAA	-6	NA	156077186	156075123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156075100_156077200
ES.25345.3	chr4	-	1720	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	91	1373	91	-1373	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTATCTGTGGATTAA	7301	False	NA	0	True	ACTAAA	-19	NA	156077015	156075295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156075300_156077000
ES.25345.4	chr4	-	1582	2	Genic_Genomic	ENSMUSG00000050796.5	novel	3184	1	NA	NA	-232	-1700	multi-exon	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTGTTGTGTCTCCCG	6978	False	NA	NA	False	NA	NA	NA	156077338	156075622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr4_-_156077187_156077320
ES.25346.1	chr4	-	6472	1	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACCACCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	156086377	156079905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156079900_156086400
ES.25346.2	chr4	-	5337	2	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACCACCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	156086377	156079905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156083991_156085125
ES.25346.3	chr4	-	3596	2	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACCACCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	156086377	156079905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156080976_156083851
ES.25346.4	chr4	-	6372	2	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACCACCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	156086325	156079905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156086153_156086200
ES.25346.5	chr4	-	2439	3	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156086379	156079929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156080976_156083851_156083991_156085125
ES.25347.1	chr4	-	5231	3	NNC	ENSMUSG00000087381.9	novel	480	3	NA	NA	-2262	1584	intron_retention	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTGTGCGCGTGTGG	NA	False	NA	NA	False	NA	NA	NA	156110543	156104880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156107258_156107456_156109172_156109404
ES.25347.2	chr4	-	2474	7	Fusion	ENSMUSG00000087381.9_ENSMUSG00000103183.2	novel	352	4	NA	NA	-1	1572	multi-exon	FALSE	canonical	0	0	junction_1	2.42670329642684	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAAAGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	156116080	156104892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156106770_156107741_156107898_156108156_156108295_156110411_156110499_156112936_156113012_156114878_156114974_156116034
ES.25347.3	chr4	-	3691	5	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	7	535	intron_retention	FALSE	non_canonical	0	0	junction_1	2.59807621135332	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	156116093	156107648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156109172_156109404_156111344_156112936_156113012_156114878_156114974_156116034
ES.25347.4	chr4	-	1981	5	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	-6	1064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.59807621135332	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGGTGTTTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	156116085	156109689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156111344_156112936_156113012_156114621_156114728_156114878_156114974_156116034
ES.25347.5	chr4	-	4798	2	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	4	1063	intron_retention	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACAGGTGTTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	156116096	156109690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156113012_156114619
ES.25347.6	chr4	-	1891	4	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	-3	1062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.49443825784929	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACAGGTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	156116103	156109691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156111344_156112936_156113012_156114878_156114974_156116034
ES.25347.7	chr4	-	5218	3	NNC	ENSMUSG00000087381.9	novel	810	4	NA	NA	4	1062	intron_retention	TRUE	non_canonical	0	0	junction_1	3	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACAGGTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	156116075	156109691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156114385_156114489_156114974_156116034
ES.25348.1	chr4	-	3086	1	FSM	ENSMUSG00000065400.3	ENSMUST00000083466.3	90	1	-818	-2178	-818	2178	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATGTTGATCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	156140260	156137174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156137200_156140300
ES.25349.1	chr4	+	3371	4	Intergenic	novelGene_21130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTACAAGTTATTT	NA	False	NA	NA	False	TTTAAA	-3	NA	156153424	156170133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156153449_156156965_156157040_156157754_156157882_156166987
ES.2535.1	chr10	+	12508	1	Intergenic	novelGene_1925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	30444462	30456970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30444500_30457000
ES.25350.1	chr4	+	248	1	Intergenic	novelGene_21131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGACAGGTGTCCTCTG	1142	False	NA	NA	False	AAAAAG	-29	NA	156187325	156187573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156187300_156187600
ES.25351.1	chr4	+	179	1	Intergenic	novelGene_21132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4733	False	NA	NA	False	NA	NA	NA	156190916	156191095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156190900_156191100
ES.25352.1	chr4	+	2679	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	-154	3	-154	-1	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8101	False	NA	19	True	NA	NA	NA	156194284	156211719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.10	chr4	+	4090	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-4	-411	intron_retention	FALSE	canonical	3	88	junction_1	50.3550658132945	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGGAGCCCACCC	8251	False	NA	NA	False	NA	NA	NA	156194434	156210265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.11	chr4	+	4896	6	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	88	junction_1	47.3184953268804	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTAGTGTGGCTGG	8252	False	NA	NA	False	NA	NA	NA	156194435	156210676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208580_156209873
ES.25352.12	chr4	+	6297	8	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_3	93.3273807625608	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8253	False	NA	22	True	NA	NA	NA	156194436	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156200879_156201103_156201172_156201306_156201466_156201561_156203620_156206874_156207991_156208580_156209873
ES.25352.13	chr4	+	4033	9	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_4	73.4183219639349	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8254	False	NA	18	True	NA	NA	NA	156194437	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156205203_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.14	chr4	+	2834	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.6514187735622	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8255	False	NA	19	True	NA	NA	NA	156194438	156211719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156204320_156204630_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.15	chr4	+	9113	4	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	88	junction_1	55.0716704748357	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8255	False	NA	18	True	NA	NA	NA	156194438	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156208580_156209873
ES.25352.16	chr4	+	5936	6	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	88	junction_1	47.3184953268804	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8255	False	NA	19	True	NA	NA	NA	156194438	156211719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208580_156209873
ES.25352.17	chr4	+	5781	8	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	-3	intron_retention	FALSE	canonical	1	9	junction_3	83.6999012507647	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTTGAGGTCATG	8255	False	NA	17	True	NA	NA	NA	156194438	156211717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.18	chr4	+	2938	8	FSM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	-2	1	1	1	multi-exon	FALSE	canonical	3	88	junction_1	44.3313129302804	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8256	False	NA	21	True	NA	NA	NA	156194439	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.19	chr4	+	5317	8	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	79.1070058044605	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8256	False	NA	22	True	NA	NA	NA	156194439	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201459_156201561_156203620_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.2	chr4	+	5651	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	88	junction_1	43.7483333015861	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8237	False	NA	22	True	NA	NA	NA	156194420	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.20	chr4	+	2652	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.6970276827301	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8257	False	NA	18	True	NA	NA	NA	156194440	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156201821_156201952_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.21	chr4	+	2823	8	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	75.6228558474924	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8257	False	NA	18	True	NA	NA	NA	156194440	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206500_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.22	chr4	+	2765	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	9	junction_3	76.5216018883266	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8257	False	NA	18	True	NA	NA	NA	156194440	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.23	chr4	+	2440	7	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.3408668445362	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8257	False	NA	18	True	NA	NA	NA	156194440	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206736_156206874_156207991_156208127_156209873
ES.25352.24	chr4	+	4600	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	15	intron_retention	FALSE	canonical	3	88	junction_1	43.7483333015861	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGGTGTTGGCCATGT	8257	False	NA	NA	False	NA	NA	NA	156194440	156210691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.25	chr4	+	4982	9	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	4	225	intron_retention	FALSE	canonical	0	0	junction_2	93.4933152690608	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTCCCAAGGTCT	8262	False	NA	NA	False	NA	NA	NA	156194445	156210901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201058_156201103_156201172_156201306_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.26	chr4	+	4715	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	4	225	intron_retention	FALSE	canonical	3	88	junction_1	50.3550658132945	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTCCCAAGGTCT	8262	False	NA	NA	False	NA	NA	NA	156194445	156210901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.27	chr4	+	4710	6	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-5	-1160	intron_retention	FALSE	canonical	3	88	junction_1	45.6928878492047	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCGGGTGCAGTCTTG	8266	False	NA	NA	False	NA	NA	NA	156194449	156209516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432
ES.25352.28	chr4	+	5832	7	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	88	junction_1	52.9989517716048	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8268	False	NA	18	True	NA	NA	NA	156194451	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208459_156208548_156208580_156209873
ES.25352.29	chr4	+	5916	6	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-3	224	intron_retention	FALSE	canonical	3	88	junction_1	47.9232720084929	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGTTGTCCCAAGGTC	8268	False	NA	NA	False	NA	NA	NA	156194451	156210900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156208127_156208432_156208580_156209873
ES.25352.3	chr4	+	2693	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.1142257019795	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8239	False	NA	18	True	NA	NA	NA	156194422	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.30	chr4	+	3266	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_3	83.5983932741814	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8268	False	NA	21	True	NA	NA	NA	156194451	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156200879_156201103_156201172_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208580_156209873
ES.25352.31	chr4	+	7675	6	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	88	junction_1	44.6569143582492	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8269	False	NA	18	True	NA	NA	NA	156194452	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.32	chr4	+	3536	9	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	35	junction_4	68.5628133538874	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8269	False	NA	21	True	NA	NA	NA	156194452	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156204630_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.33	chr4	+	5293	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	69	junction_4	56.7266988934394	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8269	False	NA	18	True	NA	NA	NA	156194452	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.34	chr4	+	3854	8	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	35	junction_4	65.6089217427394	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8270	False	NA	18	True	NA	NA	NA	156194453	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156204630_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.35	chr4	+	2387	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	85.9665335927836	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8270	False	NA	18	True	NA	NA	NA	156194453	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208548_156208580_156209873
ES.25352.36	chr4	+	2927	12	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	85.6558557241401	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8270	False	NA	18	True	NA	NA	NA	156194453	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156204285_156204630_156205203_156205269_156206380_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.37	chr4	+	3277	10	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_3	87.7438753094539	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8270	False	NA	18	True	NA	NA	NA	156194453	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156200879_156201103_156201172_156201306_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.38	chr4	+	5204	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	69	junction_4	57.7990862817052	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8270	False	NA	20	True	NA	NA	NA	156194453	156211720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.39	chr4	+	3788	9	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_4	76.4198926981712	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8270	False	NA	21	True	NA	NA	NA	156194453	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156205203_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.4	chr4	+	3466	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	66.7432893006231	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8246	False	NA	18	True	NA	NA	NA	156194429	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156204630_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.40	chr4	+	6072	7	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	9	junction_3	85.8053352394567	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTTGAGGTCATG	8270	False	NA	17	True	NA	NA	NA	156194453	156211717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156206874_156207991_156208580_156209873
ES.25352.41	chr4	+	1485	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	2	118	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACAGTGTTAGGAGTTT	8274	False	NA	NA	False	NA	NA	NA	156194457	156210794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.42	chr4	+	4870	8	NNC	ENSMUSG00000059939.14	novel	1329	9	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	74.5169478052079	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTAGTGTGGCTGG	8283	False	NA	NA	False	NA	NA	NA	156194466	156210676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194850_156198313_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.43	chr4	+	2882	9	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	70.2618984585529	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8283	False	NA	22	True	NA	NA	NA	156194466	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194541_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.44	chr4	+	1596	4	ISM	ENSMUSG00000059939.14	ENSMUST00000127332.8	689	5	-6	1792	-6	855	5prime_fragment	FALSE	canonical	3	85	junction_1	58.2084377236	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGGAGATTGTTCTGT	8286	False	NA	NA	False	GATAAA	-2	NA	156194469	156204848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620
ES.25352.45	chr4	+	3411	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_3	87.854818512148	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8286	False	NA	18	True	NA	NA	NA	156194469	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156200879_156201103_156201172_156201306_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.46	chr4	+	3260	8	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-6	0	intron_retention	TRUE	canonical	2	6	junction_6	72.6473169020111	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8286	False	NA	20	True	NA	NA	NA	156194469	156211720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208330_156208432_156208580_156209873
ES.25352.47	chr4	+	3204	9	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	9	junction_3	78.5202999230135	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8290	False	NA	18	True	NA	NA	NA	156194473	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.48	chr4	+	5656	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	51.0613876243336	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8292	False	NA	22	True	NA	NA	NA	156194475	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.49	chr4	+	2630	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	23	junction_4	69.4132846192474	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8293	False	NA	18	True	NA	NA	NA	156194476	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.5	chr4	+	1712	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	-7	823	-7	223	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGTTGTCCCAAGGT	8248	False	NA	NA	False	NA	NA	NA	156194431	156210899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.50	chr4	+	2787	11	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.2636335435255	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	8293	False	NA	16	True	NA	NA	NA	156194476	156211716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.51	chr4	+	2880	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	3	1	intron_retention	FALSE	canonical	1	9	junction_3	76.6927491864634	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8295	False	NA	21	True	NA	NA	NA	156194478	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.52	chr4	+	3135	12	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	80.8140401842965	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8295	False	NA	22	True	NA	NA	NA	156194478	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156204285_156204630_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.53	chr4	+	3109	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-5	1	intron_retention	FALSE	canonical	1	9	junction_3	74.877348270025	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTGAGGTCATGATGT	8298	False	NA	21	True	NA	NA	NA	156194481	156211721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.54	chr4	+	2719	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	69	junction_5	54.8475158963467	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8300	False	NA	18	True	NA	NA	NA	156194483	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.55	chr4	+	4914	7	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-3	222	intron_retention	FALSE	canonical	3	85	junction_1	44.8293058909757	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTTGTTGTCCCAAGG	8300	False	NA	NA	False	NA	NA	NA	156194483	156210898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.56	chr4	+	2757	11	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.818797141606	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8302	False	NA	18	True	NA	NA	NA	156194485	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156201821_156201952_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.57	chr4	+	6335	8	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_2	94.0030394645377	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	8303	False	NA	16	True	NA	NA	NA	156194486	156211716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156200935_156201103_156201172_156201306_156201466_156201561_156203620_156206874_156207991_156208580_156209873
ES.25352.58	chr4	+	3653	9	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_4	68.9075467565056	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8303	False	NA	22	True	NA	NA	NA	156194486	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156204630_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.59	chr4	+	5645	7	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	79.9916662325937	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8303	False	NA	22	True	NA	NA	NA	156194486	156211722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208522_156208580_156209873
ES.25352.6	chr4	+	5550	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-5	2	intron_retention	FALSE	canonical	3	88	junction_1	50.3550658132945	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGGTCATGATGTCTC	8250	False	NA	24	True	NA	NA	NA	156194433	156211724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.60	chr4	+	3880	9	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	35	junction_4	65.3490627323759	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8304	False	NA	18	True	NA	NA	NA	156194487	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156204630_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.61	chr4	+	4090	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-4	-504	intron_retention	FALSE	canonical	3	85	junction_1	51.0613876243336	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGGACTCAAGAGCAAG	8308	False	NA	NA	False	NA	NA	NA	156194491	156210172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.62	chr4	+	2618	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	38	4	-3	-4	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	8309	False	NA	16	True	NA	NA	NA	156194492	156211716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.63	chr4	+	2831	9	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.7359096709331	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8309	False	NA	18	True	NA	NA	NA	156194492	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206500_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.64	chr4	+	2935	7	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_6	74.8927010239761	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8313	False	NA	18	True	NA	NA	NA	156194496	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156209819
ES.25352.65	chr4	+	2938	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	85	junction_1	49.4621067080649	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8313	False	NA	18	True	NA	NA	NA	156194496	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.66	chr4	+	3027	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	85	junction_1	45.1781055876604	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTTGAGGTCATG	8313	False	NA	17	True	NA	NA	NA	156194496	156211717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.67	chr4	+	2834	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	87.0223470660777	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8314	False	NA	18	True	NA	NA	NA	156194497	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206578_156206807_156206874_156207991_156208127_156208548_156208580_156209873
ES.25352.68	chr4	+	5397	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	69	junction_4	57.324710631451	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8317	False	NA	20	True	NA	NA	NA	156194500	156211720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.69	chr4	+	2741	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.5780111669169	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	8318	False	NA	16	True	NA	NA	NA	156194501	156211716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156204656_156204802_156206724_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.7	chr4	+	2625	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-5	2	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGGTCATGATGTCTC	8250	False	NA	24	True	NA	NA	NA	156194433	156211724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.70	chr4	+	5663	7	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	60	-1	intron_retention	FALSE	canonical	3	85	junction_1	44.8293058909757	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGTTGAGGTCATGAT	8372	False	NA	19	True	NA	NA	NA	156194555	156211719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.71	chr4	+	5817	8	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	60	0	intron_retention	FALSE	canonical	1	9	junction_3	83.9387531817949	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8372	False	NA	20	True	NA	NA	NA	156194555	156211720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.72	chr4	+	2074	7	ISM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	3903	825	-8	221	3prime_fragment	FALSE	canonical	3	131	junction_3	28.5696031162882	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTGTTGTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	156198344	156210897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.73	chr4	+	199	1	Intergenic	novelGene_21133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGCATAAACACTTTAC	NA	False	NA	NA	False	NA	NA	NA	156198637	156198836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156198600_156198800
ES.25352.74	chr4	+	5748	8	NNC	ENSMUSG00000059939.14	novel	422	3	NA	NA	2565	0	intron_retention	FALSE	canonical	0	0	junction_1	93.8048343038647	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	1388	False	NA	20	True	NA	NA	NA	156200917	156211720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156201103_156201172_156201306_156201466_156201561_156203620_156206874_156207991_156208171_156208432_156208459_156208548_156208580_156209873
ES.25352.75	chr4	+	6935	5	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	3123	1466	intron_retention	FALSE	canonical	3	183	junction_2	13.5161939909133	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGGTGATGTGCACAT	1946	False	NA	NA	False	AATACA	-13	NA	156201475	156213188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.76	chr4	+	3197	7	NNC	ENSMUSG00000059939.14	novel	1329	9	NA	NA	3123	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.6970280393245	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	1946	False	NA	18	True	NA	NA	NA	156201475	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156201561_156203620_156204630_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.77	chr4	+	5146	3	ISM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	10706	5	6795	-3	intron_retention	FALSE	canonical	3	183	junction_1	7.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGTTGAGGTCATG	1846	False	NA	17	True	NA	NA	NA	156205147	156211717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156206874_156207991_156208127_156208432
ES.25352.78	chr4	+	2650	5	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	7647	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	86.204335737827	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	2698	False	NA	18	True	NA	NA	NA	156205999	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156206092_156206442_156206874_156207991_156208127_156208432_156208580_156209873
ES.25352.79	chr4	+	3335	2	ISM	ENSMUSG00000059939.14	ENSMUST00000105576.2	1329	9	11993	-225	8096	225	intron_retention	FALSE	canonical	3	183	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTCCCAAGGTCT	3147	False	NA	NA	False	NA	NA	NA	156206448	156210901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156206874_156207991
ES.25352.8	chr4	+	2849	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	8250	False	NA	16	True	NA	NA	NA	156194433	156211716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ES.25352.9	chr4	+	5816	7	NNC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	79.7964424158259	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTTGAGGTCATGA	8250	False	NA	18	True	NA	NA	NA	156194433	156211718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156194481_156198345_156198629_156201454_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
ES.25353.1	chr4	-	176	1	Antisense	novelGene_ENSMUSG00000059939.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGTACCCTT	NA	False	NA	NA	False	NA	NA	NA	156201300	156201124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156201100_156201300
ES.25354.1	chr4	-	7349	35	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4885	537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	115.565886179456	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTTATGTTTTATTG	NA	False	NA	NA	False	AATAAA	-1	NA	156277060	156249209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156263958_156269544_156269593_156276982
ES.25354.10	chr4	-	4022	16	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	865	2	intron_retention	FALSE	canonical	1	3	junction_10	149.710327707284	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTGTTTGTACTTGA	NA	False	NA	-19	True	AATAAA	-20	NA	156257322	156249744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255590_156255724_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224
ES.25354.100	chr4	-	7017	34	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4892	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	116.443115218232	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAAATAGGGACTGTGT	NA	False	NA	-29	True	AATAAA	-10	NA	156277053	156249754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.101	chr4	-	7220	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	149	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	104.196071060716	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAATAGGGACTGTG	NA	False	NA	-30	True	AATAAA	-9	NA	156281796	156249755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264059_156269538_156269593_156279700_156279963_156281670
ES.25354.103	chr4	-	6619	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	3	269	3	-269	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTCCTGTGTGTGCT	NA	False	NA	NA	False	ATTAAA	-37	NA	156281942	156250503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.105	chr4	-	6498	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	18	375	18	-375	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAATTGGGTGAGAAC	NA	False	NA	NA	False	NA	NA	NA	156281927	156250609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.106	chr4	-	6256	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	-9	644	-9	-644	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGACTGCACGTTGG	NA	False	NA	NA	False	NA	NA	NA	156281954	156250878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.107	chr4	-	2874	17	ISM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	8831	6030	-3340	979	internal_fragment	FALSE	canonical	3	191	junction_7	49.5605690039975	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGATGGTAGCTGTAACT	NA	False	NA	NA	False	AATAGA	-13	NA	156261527	156255776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_-_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412
ES.25354.12	chr4	-	7528	35	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-45	0	intron_retention	FALSE	canonical	3	186	junction_31	91.1822768549719	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281990	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.14	chr4	-	7443	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_6	106.53313486202	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281928	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.15	chr4	-	7347	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	103.927431510685	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281898	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258153_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.16	chr4	-	7284	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	115.202005368033	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281950	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156263958_156269544_156269593_156279700_156279963_156281670
ES.25354.18	chr4	-	6057	14	NIC	ENSMUSG00000041936.19	novel	7262	38	NA	NA	58	0	intron_retention	FALSE	canonical	3	246	junction_12	71.9057568614814	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156258129	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251472_156251738_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459
ES.25354.19	chr4	-	7453	33	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4872	0	intron_retention	FALSE	canonical	0	0	junction_28	118.065457050051	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156277073	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263235_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.2	chr4	-	7466	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	-72	-503	-72	15	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGACAGCCGGGTGGCT	NA	False	NA	-6	True	AATAAA	-33	NA	156282017	156249731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.20	chr4	-	5393	24	NIC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-2732	0	intron_retention	FALSE	canonical	3	223	junction_23	80.7231727809216	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156260919	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860
ES.25354.21	chr4	-	8195	37	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	114.446318754878	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281948	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156270007_156270821_156279700_156279963_156281670
ES.25354.22	chr4	-	8502	30	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-14	0	intron_retention	FALSE	canonical	3	200	junction_24	87.5671171159585	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281959	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.23	chr4	-	7455	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.402465509677	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281995	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251966_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257612_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.24	chr4	-	7003	25	NIC	ENSMUSG00000041936.19	novel	7262	38	NA	NA	-3772	0	intron_retention	FALSE	canonical	3	223	junction_22	83.5533657643758	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156261959	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412
ES.25354.26	chr4	-	6918	35	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4887	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_34	104.741104452539	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156277058	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.27	chr4	-	5825	29	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-3410	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	120.411263796123	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156261597	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255590_156255724_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412
ES.25354.29	chr4	-	7399	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_18	105.254905613512	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281970	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258439_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.3	chr4	-	7587	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-9	5	intron_retention	FALSE	non_canonical	0	0	junction_5	104.392721108254	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTTTGTACTTGACAG	NA	False	NA	-16	True	AATAAA	-23	NA	156281954	156249741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.32	chr4	-	6765	30	NIC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-5593	0	intron_retention	FALSE	canonical	3	200	junction_27	87.9911491603494	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156263780	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554
ES.25354.33	chr4	-	7422	33	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	15	0	intron_retention	TRUE	canonical	1	3	junction_15	106.197762894281	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281930	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.34	chr4	-	9259	30	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	22	0	intron_retention	FALSE	canonical	3	200	junction_27	86.4131738976632	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281923	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156263093_156263239_156263465_156263554_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.36	chr4	-	7163	35	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	103.791429798678	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281954	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.37	chr4	-	7958	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-55	0	intron_retention	FALSE	non_canonical	0	0	junction_6	106.197781420781	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156282000	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.4	chr4	-	7571	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-4	4	intron_retention	FALSE	non_canonical	0	0	junction_6	105.507936675688	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTTGTACTTGACA	NA	False	NA	-17	True	AATAAA	-22	NA	156281949	156249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.41	chr4	-	7447	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	2	0	intron_retention	FALSE	canonical	2	4	junction_31	103.065924412904	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281943	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263746_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.42	chr4	-	4717	22	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-938	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	111.96466481797	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156259125	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257133_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027
ES.25354.43	chr4	-	5716	26	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.8335178004768	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281937	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251447_156256296_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.44	chr4	-	4228	15	NIC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	307	0	intron_retention	FALSE	canonical	1	1	junction_7	121.783619588186	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156257880	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459
ES.25354.45	chr4	-	5750	25	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-5593	0	intron_retention	FALSE	non_canonical	0	0	junction_4	101.711730108511	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156263780	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253272_156255365_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554
ES.25354.46	chr4	-	7395	33	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4892	0	intron_retention	FALSE	canonical	2	4	junction_30	116.540325471218	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156277053	156249746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263746_156263849_156264066_156269544_156269593_156276982
ES.25354.49	chr4	-	7311	37	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.626806567882	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281954	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156250028_156250108_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.5	chr4	-	7403	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	105.007638206145	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTTGTACTTGACA	NA	False	NA	-17	True	AATAAA	-22	NA	156281957	156249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.52	chr4	-	4973	20	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-690	0	intron_retention	FALSE	canonical	3	191	junction_17	84.7058132139924	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156258877	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258138_156258241_156258548_156258633_156258740_156258812
ES.25354.53	chr4	-	7957	33	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	16	0	intron_retention	FALSE	canonical	3	186	junction_29	91.6122731611327	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281929	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.54	chr4	-	8051	32	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_17	107.66535814473	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281964	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258546_156258633_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.56	chr4	-	8045	32	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-2	0	intron_retention	FALSE	canonical	3	200	junction_26	90.2139669536085	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281947	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.58	chr4	-	6127	23	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-2760	0	intron_retention	FALSE	canonical	3	223	junction_22	79.6941078527533	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156260947	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860
ES.25354.59	chr4	-	6862	35	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4893	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	115.565886179456	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156277052	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264020_156269544_156269593_156276982
ES.25354.6	chr4	-	7449	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	171	4	intron_retention	FALSE	canonical	1	3	junction_11	115.189334823771	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTTGTACTTGACA	NA	False	NA	-17	True	AATAAA	-22	NA	156281774	156249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255590_156255724_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.60	chr4	-	3844	9	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	1924	0	intron_retention	FALSE	canonical	3	284	junction_7	69.2689504756641	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156256263	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244
ES.25354.62	chr4	-	7528	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-9	0	intron_retention	FALSE	canonical	2	3	junction_10	104.884678803679	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281954	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255796_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.65	chr4	-	3231	13	NNC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	1748	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.24331059414	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156256439	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253272_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244
ES.25354.66	chr4	-	8775	24	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-4673	0	intron_retention	FALSE	canonical	3	223	junction_21	80.4874328271202	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156262860	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412
ES.25354.67	chr4	-	7945	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	106.700666069044	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281947	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255540_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.68	chr4	-	6946	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	2201	0	intron_retention	FALSE	canonical	1	4	junction_25	105.43258217817	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156279744	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261130_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700
ES.25354.69	chr4	-	7562	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_29	116.063446440439	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281926	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263849_156264066_156269544_156269593_156279700_156279806_156279890_156279963_156281670
ES.25354.7	chr4	-	8235	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	47	4	intron_retention	FALSE	canonical	0	0	junction_19	105.530629050622	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTTGTACTTGACA	NA	False	NA	-17	True	AATAAA	-22	NA	156281898	156249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258460_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.72	chr4	-	7394	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	104.776302041004	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281957	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261672_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.73	chr4	-	7432	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_17	116.306628503753	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281955	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257571_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261130_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.75	chr4	-	7571	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_30	103.322677847488	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281943	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263780_156263845_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.76	chr4	-	4887	21	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	127.130287500658	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156281994	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256743_156262951_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.77	chr4	-	5451	20	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-1211	0	intron_retention	FALSE	canonical	3	246	junction_14	77.4899510954525	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGACTGTGTTTGT	NA	False	NA	-25	True	AATAAA	-14	NA	156259398	156249750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312
ES.25354.8	chr4	-	7947	34	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-48	4	intron_retention	FALSE	canonical	3	186	junction_30	92.1086713952012	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTTGTACTTGACA	NA	False	NA	-17	True	AATAAA	-22	NA	156281993	156249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.80	chr4	-	3990	18	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	164	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	114.016996244095	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGGGACTGTGTTTG	NA	False	NA	-26	True	AATAAA	-13	NA	156258023	156249751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257160_156257224_156257340_156257459_156257588_156257999
ES.25354.81	chr4	-	6666	10	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	701	-1	intron_retention	FALSE	canonical	3	246	junction_8	67.4066341021984	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGGGACTGTGTTTG	NA	False	NA	-26	True	AATAAA	-13	NA	156257486	156249751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156253278_156253359_156253553_156253676_156254869_156255035_156255171_156255257_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459
ES.25354.83	chr4	-	7277	17	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-1290	-1	intron_retention	FALSE	canonical	3	246	junction_11	63.4427645598771	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGGGACTGTGTTTG	NA	False	NA	-26	True	AATAAA	-13	NA	156259477	156249751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312
ES.25354.86	chr4	-	7829	34	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	14	-2	intron_retention	FALSE	canonical	0	0	junction_31	105.126116922185	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156281931	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264020_156269544_156269593_156279700_156279963_156281670
ES.25354.87	chr4	-	6934	34	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4887	-2	intron_retention	FALSE	canonical	0	0	junction_11	117.026575902234	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156277058	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255940_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.88	chr4	-	7002	34	NIC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	289	-2	intron_retention	FALSE	canonical	0	0	junction_33	105.247314669682	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156270069	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156270007
ES.25354.9	chr4	-	6012	30	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	-4784	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	131.578372137174	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGTTTGTACTTGAC	NA	False	NA	-18	True	AATAAA	-21	NA	156262971	156249743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254681_156254767_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261682_156261899_156262885
ES.25354.90	chr4	-	7020	34	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4883	-2	intron_retention	FALSE	canonical	3	10	junction_33	104.368449190402	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156277062	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.91	chr4	-	6099	14	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-63	-2	intron_retention	FALSE	canonical	3	246	junction_12	76.1815023596617	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156258250	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156253553_156253676_156253794_156254226_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459
ES.25354.92	chr4	-	7215	35	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	230	-2	intron_retention	FALSE	canonical	3	186	junction_31	92.2681139088182	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156281715	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.93	chr4	-	7482	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	104.8613188634	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156281942	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.95	chr4	-	7379	36	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	104.196071060716	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156281939	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264078_156269544_156269593_156279700_156279963_156281670
ES.25354.96	chr4	-	7394	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_32	115.222051306451	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATAGGGACTGTGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	156281948	156249752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261130_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264020_156269544_156269593_156279700_156279963_156281670
ES.25354.97	chr4	-	6914	35	NNC	ENSMUSG00000041936.19	novel	7193	35	NA	NA	4892	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	116.132903223301	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAATAGGGACTGTGTT	NA	False	NA	-28	True	AATAAA	-11	NA	156277053	156249753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253802_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156276982
ES.25354.98	chr4	-	7446	35	NNC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	-25	-4	intron_retention	FALSE	canonical	0	0	junction_18	104.490446741353	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAAATAGGGACTGTGT	NA	False	NA	-29	True	AATAAA	-10	NA	156281970	156249754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258263_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ES.25354.99	chr4	-	6960	23	NIC	ENSMUSG00000041936.19	novel	8612	36	NA	NA	-3469	-4	intron_retention	FALSE	canonical	3	223	junction_20	86.0912090807867	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAAATAGGGACTGTGT	NA	False	NA	-29	True	AATAAA	-10	NA	156261656	156249754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412
ES.25355.1	chr4	-	178	1	Intergenic	novelGene_21134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156295743	156295565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156295600_156295700
ES.25356.1	chr4	-	180	1	Intergenic	novelGene_21135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTGGAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	156299684	156299504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156299500_156299700
ES.25357.1	chr4	+	3490	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	-1261	-178	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	572.773666582354	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTCG	NA	False	NA	27	True	GATAAA	-22	NA	156319114	156331882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156319424_156319884_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323943_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.10	chr4	+	4134	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	0	-27	intron_retention	FALSE	canonical	3	12	junction_4	596.927281945461	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATTGCTTTTCTTCTT	NA	False	NA	-14	True	NA	NA	NA	156320466	156332033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.100	chr4	+	3738	9	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	177	804	intron_retention	FALSE	canonical	0	0	junction_3	631.541516845884	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACTT	NA	False	NA	NA	False	AATAAA	-7	NA	156321852	156329402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496
ES.25357.101	chr4	+	3427	15	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	267	-182	intron_retention	FALSE	canonical	3	1505	junction_5	202.077134696994	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	23	True	GATAAA	-18	NA	156321942	156331878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156321975_156322056_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.103	chr4	+	1941	15	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	-1965	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	663.312270629262	1576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTTTTC	NA	False	NA	26	True	GATAAA	-21	NA	156323717	156331881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156323760_156323846_156323938_156324550_156324627_156324750_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.104	chr4	+	3353	9	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	-578	-183	intron_retention	FALSE	canonical	3	96	junction_1	614.999745934907	1576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	22	True	GATAAA	-17	NA	156325104	156331877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.105	chr4	+	1914	5	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	8277	45	2566	-32	3prime_fragment	FALSE	canonical	3	1549	junction_1	204.138433422029	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCTCATTGCTTTTC	NA	False	NA	-19	True	NA	NA	NA	156328743	156332028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.12	chr4	+	3259	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	1	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	588.290230296006	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320467	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156321005_156321353_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.13	chr4	+	2489	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	574.293597215282	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTTTCGAGACAGG	NA	False	NA	34	True	GATAAA	-29	NA	156320468	156331889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.14	chr4	+	3219	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-180	intron_retention	FALSE	canonical	0	0	junction_15	610.079013197266	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320468	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331136_156331221_156331475
ES.25357.16	chr4	+	2158	15	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	495.393128778364	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320468	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322159_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.17	chr4	+	2659	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	675.364693432965	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320468	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329444_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.18	chr4	+	3195	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-180	intron_retention	FALSE	non_canonical	0	0	junction_6	463.955783300663	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320468	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324544_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.2	chr4	+	4732	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	-1244	-184	intron_retention	TRUE	non_canonical	0	0	junction_1	688.149677319594	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156319131	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156319424_156319884_156320528_156320611_156320987_156321332_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.20	chr4	+	2668	18	FSM	ENSMUSG00000095567.9	ENSMUST00000179886.3	2945	18	93	184	2	-184	multi-exon	FALSE	canonical	0	0	junction_5	464.919288303549	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320468	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.21	chr4	+	2616	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	452.638591421947	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320468	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324524_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.22	chr4	+	4437	16	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-180	intron_retention	FALSE	canonical	0	0	junction_6	491.306403603924	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320468	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.23	chr4	+	2638	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	2	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	574.293597215282	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTTTCTTCTTAAGCC	NA	False	NA	-9	True	NA	NA	NA	156320468	156332038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.24	chr4	+	2800	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	3	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	728.436393206276	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCCAGCTCATTGCT	NA	False	NA	-23	True	NA	NA	NA	156320469	156332024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.25	chr4	+	5018	15	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	3	-29	intron_retention	FALSE	canonical	0	0	junction_5	497.05584727083	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCATTGCTTTTCTTC	NA	False	NA	-16	True	NA	NA	NA	156320469	156332031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.26	chr4	+	4005	16	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	3	-181	intron_retention	FALSE	canonical	3	96	junction_7	471.406378121185	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTTT	NA	False	NA	24	True	GATAAA	-19	NA	156320469	156331879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.28	chr4	+	2440	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	584.943418177464	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320471	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325916_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.29	chr4	+	3831	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-180	intron_retention	FALSE	non_canonical	0	0	junction_6	603.901763405067	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320471	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331479
ES.25357.30	chr4	+	3144	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	676.984419555567	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	23	True	GATAAA	-18	NA	156320471	156331878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320945_156321292_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.31	chr4	+	3419	18	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-180	intron_retention	FALSE	canonical	0	0	junction_6	465.58846196717	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320471	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.32	chr4	+	2647	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	5	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	728.436393206276	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	18	True	GATAAA	-13	NA	156320471	156331873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.33	chr4	+	3799	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-180	intron_retention	FALSE	canonical	3	96	junction_8	446.874283216208	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320472	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156331221_156331475
ES.25357.34	chr4	+	2663	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	588.166601072591	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTATGTTTTCCTTTTAA	NA	False	NA	8	True	NA	NA	NA	156320472	156332055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325867_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.35	chr4	+	3372	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-184	intron_retention	FALSE	canonical	3	12	junction_4	580.341906461236	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320472	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.36	chr4	+	2333	15	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	495.393128778364	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTATGTTTTCCTTTT	NA	False	NA	6	True	NA	NA	NA	156320472	156332053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322159_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.37	chr4	+	2161	15	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	642.839999771423	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCTCATTGCTTTTC	NA	False	NA	-19	True	NA	NA	NA	156320472	156332028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322159_156325056_156325171_156325916_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.39	chr4	+	5452	15	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-186	intron_retention	FALSE	canonical	0	0	junction_6	508.429233732961	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320472	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.4	chr4	+	2773	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	-8	20	-8	-7	multi-exon	FALSE	canonical	0	0	junction_6	452.638591421947	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTATGTTTTCCTTTT	NA	False	NA	6	True	NA	NA	NA	156320458	156332053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.40	chr4	+	3319	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	6	-34	intron_retention	FALSE	canonical	3	96	junction_7	453.803216576304	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCAGCTCATTGCTTT	NA	False	NA	-21	True	NA	NA	NA	156320472	156332026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.41	chr4	+	3592	17	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	7	-179	intron_retention	FALSE	canonical	0	0	junction_5	725.709391625704	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTTTTC	NA	False	NA	26	True	GATAAA	-21	NA	156320473	156331881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321642_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.43	chr4	+	3453	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	7	-34	intron_retention	FALSE	canonical	0	0	junction_6	590.08668063043	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCAGCTCATTGCTTT	NA	False	NA	-21	True	NA	NA	NA	156320473	156332026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.44	chr4	+	3184	18	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	7	-180	intron_retention	FALSE	canonical	0	0	junction_6	463.955783300663	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320473	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.45	chr4	+	4169	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	7	-186	intron_retention	TRUE	non_canonical	0	0	junction_1	705.992839392409	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320473	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320970_156321191_156321333_156321453_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.47	chr4	+	2665	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	10	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	587.431816374368	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGCTCATTGCTTTTC	NA	False	NA	-19	True	NA	NA	NA	156320476	156332028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.48	chr4	+	3847	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	11	-182	intron_retention	FALSE	non_canonical	0	0	junction_2	605.006174008361	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	23	True	GATAAA	-18	NA	156320477	156331878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320945_156321292_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.49	chr4	+	2691	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	12	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	572.773666582354	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATTGCTTTTCTTCTT	NA	False	NA	-14	True	NA	NA	NA	156320478	156332033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475_156331764_156331805
ES.25357.5	chr4	+	2591	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	-7	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	576.015123794077	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTTTTC	NA	False	NA	26	True	GATAAA	-21	NA	156320459	156331881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327975_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.50	chr4	+	3474	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	12	-34	intron_retention	FALSE	canonical	0	0	junction_5	677.185024268424	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCAGCTCATTGCTTT	NA	False	NA	-21	True	NA	NA	NA	156320478	156332026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323820_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.52	chr4	+	4842	16	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	13	-177	intron_retention	FALSE	canonical	0	0	junction_2	743.716511104123	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTTTTCGA	NA	False	NA	28	True	GATAAA	-23	NA	156320479	156331883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320906_156321503_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324621_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.53	chr4	+	4011	17	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	14	-178	intron_retention	FALSE	canonical	0	0	junction_6	478.116944376582	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTCG	NA	False	NA	27	True	GATAAA	-22	NA	156320480	156331882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.54	chr4	+	4618	16	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	14	-184	intron_retention	FALSE	canonical	3	1424	junction_1	226.085234664569	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320480	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.56	chr4	+	4152	18	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	14	-188	intron_retention	TRUE	non_canonical	0	0	junction_2	705.873186214989	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	17	True	GATAAA	-12	NA	156320480	156331872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320945_156321242_156321403_156321453_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.57	chr4	+	2531	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	14	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	585.007027498151	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320480	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322138_156323638_156323760_156323846_156323943_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.58	chr4	+	3162	17	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	14	-181	intron_retention	FALSE	canonical	3	96	junction_7	456.492739365863	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTTT	NA	False	NA	24	True	GATAAA	-19	NA	156320480	156331879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.59	chr4	+	3107	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	16	-182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	676.984419555567	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	23	True	GATAAA	-18	NA	156320482	156331878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156321005_156321378_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.60	chr4	+	4243	16	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	17	-25	intron_retention	FALSE	canonical	0	0	junction_5	492.772050073189	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTTTTCTTCTTAA	NA	False	NA	-12	True	NA	NA	NA	156320483	156332035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.61	chr4	+	3063	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	17	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	582.104218321474	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320483	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.64	chr4	+	2881	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	17	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	586.823232475368	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTCATTGCTTTTCT	NA	False	NA	-18	True	NA	NA	NA	156320483	156332029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321642_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.65	chr4	+	2516	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	21	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	587.153598954679	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	18	True	GATAAA	-13	NA	156320487	156331873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329671_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.66	chr4	+	2714	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	21	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	583.895348309762	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTTTTCTTCTTAA	NA	False	NA	-12	True	NA	NA	NA	156320487	156332035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327978_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.67	chr4	+	4933	14	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	22	-180	intron_retention	FALSE	canonical	3	1424	junction_1	227.186652662363	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320488	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.68	chr4	+	2920	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	661.626092194508	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTATGTTTTCCTTTT	NA	False	NA	6	True	NA	NA	NA	156320488	156332053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.69	chr4	+	3442	18	NNC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	22	-180	intron_retention	FALSE	canonical	3	12	junction_3	597.153913030594	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320488	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156322186_156322502_156322680_156323638_156323760_156323846_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.7	chr4	+	4222	17	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	478.116944376582	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACTCTCGGCATTTT	NA	False	NA	26	True	NA	NA	NA	156320460	156332073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.71	chr4	+	2468	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	23	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	588.166601072591	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	22	True	GATAAA	-17	NA	156320489	156331877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325867_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.72	chr4	+	3572	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	23	-186	intron_retention	FALSE	canonical	0	0	junction_7	677.50185640491	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320489	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.73	chr4	+	3128	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	24	-180	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	676.984419555567	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320490	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156321012_156321358_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.74	chr4	+	2502	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	26	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	678.324754245503	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320492	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322138_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327978_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.76	chr4	+	2723	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	26	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	586.823232475368	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320492	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321642_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.77	chr4	+	2652	18	NIC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	27	-180	intron_retention	FALSE	canonical	0	0	junction_6	465.711919211331	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320493	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.78	chr4	+	4070	16	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	27	-188	intron_retention	FALSE	canonical	0	0	junction_5	492.772050073189	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	17	True	GATAAA	-12	NA	156320493	156331872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_+_156320528_156320611_156320783_156321799_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.79	chr4	+	3981	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	27	-180	intron_retention	TRUE	non_canonical	0	0	junction_2	694.629611791676	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320493	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156321015_156321337_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.8	chr4	+	3296	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	-6	-186	intron_retention	FALSE	canonical	0	0	junction_6	694.366784800303	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320460	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329904_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.80	chr4	+	2526	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	27	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	587.431816374368	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320493	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324524_156324627_156324713_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.81	chr4	+	2651	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	27	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	686.366592110537	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320493	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321642_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.82	chr4	+	2746	20	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	28	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	661.626092194508	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGTTTTTTCGAGA	NA	False	NA	30	True	GATAAA	-25	NA	156320494	156331885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156322502_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.83	chr4	+	4681	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	30	-186	intron_retention	TRUE	non_canonical	0	0	junction_2	622.739458837924	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320496	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156321025_156321347_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.86	chr4	+	2509	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	57	-180	intron_retention	FALSE	canonical	0	0	junction_5	589.930680345121	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320523	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.87	chr4	+	2610	18	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	64	195	64	-182	3prime_fragment	FALSE	canonical	0	0	junction_5	462.655409221227	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	23	True	GATAAA	-18	NA	156320530	156331878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.88	chr4	+	2624	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	68	-186	intron_retention	FALSE	canonical	0	0	junction_5	622.002207466943	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	19	True	GATAAA	-14	NA	156320534	156331874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324825_156325056_156325171_156325834_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.89	chr4	+	2707	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	68	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	604.445589435671	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320534	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321700_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.9	chr4	+	2513	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	0	-184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	588.166601072591	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320466	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325844_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.90	chr4	+	2986	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	70	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	689.350885687845	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	21	True	GATAAA	-16	NA	156320536	156331876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321975_156322056_156322680_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.91	chr4	+	2590	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	79	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	604.620931318322	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320545	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320783_156321799_156321968_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.94	chr4	+	2663	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	282	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	603.533316120842	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCAGCTCATTGCTTT	NA	False	NA	-21	True	NA	NA	NA	156320748	156332026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320906_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.95	chr4	+	2508	18	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	291	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	603.533316120842	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	25	True	GATAAA	-20	NA	156320757	156331880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156320906_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.96	chr4	+	2470	19	NNC	ENSMUSG00000095567.9	novel	722	3	NA	NA	-398	-176	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	687.684262624737	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTCGAG	NA	False	NA	29	True	GATAAA	-24	NA	156321277	156331884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156321288_156321462_156321559_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.97	chr4	+	2474	18	NNC	ENSMUSG00000095567.9	novel	722	3	NA	NA	-238	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	603.989212534571	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	18	True	GATAAA	-13	NA	156321437	156331873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156321559_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.98	chr4	+	2768	16	ISM	ENSMUSG00000095567.9	ENSMUST00000179886.3	2945	18	1247	31	-53	-31	3prime_fragment	FALSE	canonical	0	0	junction_3	489.399695772507	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTCATTGCTTTTCT	NA	False	NA	-18	True	NA	NA	NA	156321622	156332029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr4_+_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25357.99	chr4	+	2345	17	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	123	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	609.875896699484	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	18	True	GATAAA	-13	NA	156321798	156331873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_+_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327975_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ES.25358.1	chr4	-	2178	16	NNC	ENSMUSG00000078485.5	novel	1982	16	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	5.75268053461457	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCAGGTTGTCAGGC	NA	False	NA	NA	False	AATACA	-9	NA	156312980	156305920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312772_156312865
ES.25358.10	chr4	-	5520	21	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	1982	16	NA	NA	-6	-2	intron_retention	FALSE	canonical	2	4	junction_14	23.1954198065049	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCATCAGGTCAAGGTT	9883	False	NA	-12	True	ATTAAA	-14	NA	156317679	156306124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312774_156312865_156315144_156315370_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ES.25358.11	chr4	-	3399	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-48	1	intron_retention	FALSE	canonical	0	0	junction_1	25.3497411229385	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCCCCTTTGTACC	8200	False	NA	1	True	AATAAA	-41	NA	156319362	156313790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.12	chr4	-	3995	7	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	19	1	intron_retention	FALSE	canonical	3	62	junction_2	9.68962790249909	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCCCCTTTGTACC	8267	False	NA	1	True	AATAAA	-41	NA	156319295	156313790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.13	chr4	-	4148	6	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	12	1	intron_retention	FALSE	canonical	3	62	junction_2	7.95989949685296	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCCCCTTTGTACC	8260	False	NA	1	True	AATAAA	-41	NA	156319302	156313790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.14	chr4	-	3078	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	24.8251888210342	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGGCCCCCTTTGTAC	8581	False	NA	0	True	AATAAA	-40	NA	156318981	156313791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156318902
ES.25358.15	chr4	-	2868	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_1	24.8908729367926	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGGCCCCCTTTGTAC	8271	False	NA	0	True	AATAAA	-40	NA	156319291	156313791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.16	chr4	-	2740	13	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.9861076647365	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8304	False	NA	-1	True	AATAAA	-39	NA	156319258	156313792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317318_156317460_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.17	chr4	-	2947	11	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	21	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	22.8702863996059	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGGCCCCCTTTGTA	8269	False	NA	-1	True	AATAAA	-39	NA	156319293	156313792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317081_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.18	chr4	-	2818	11	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	19	-2	intron_retention	FALSE	canonical	2	8	junction_2	29.7894276547906	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTTGGCCCCCTTTGT	8324	False	NA	-2	True	AATAAA	-38	NA	156319238	156313793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315370_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.19	chr4	-	3418	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	23	-2	intron_retention	FALSE	canonical	3	45	junction_2	11.6999525165228	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTTGGCCCCCTTTGT	8271	False	NA	-2	True	AATAAA	-38	NA	156319291	156313793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.2	chr4	-	5517	27	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	2004	16	NA	NA	11	0	intron_retention	TRUE	canonical	0	0	junction_3	28.4229468093202	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCTCTAGACTCTGAG	8316	False	NA	4	True	ATTAAA	-30	NA	156319246	156306108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306939_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312769_156312865_156314498_156314611_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.20	chr4	-	3186	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	12	2	intron_retention	FALSE	canonical	3	34	junction_1	15.2105226734652	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTTTGGCCCCCTTTG	8260	False	NA	-3	True	AATAAA	-37	NA	156319302	156313794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.21	chr4	-	3410	10	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-10	2	intron_retention	FALSE	canonical	2	4	junction_2	28.2960539062723	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATCTTTGGCCCCCTTTG	8295	False	NA	-3	True	AATAAA	-37	NA	156319267	156313794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315370_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.22	chr4	-	3479	5	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-385	0	intron_retention	FALSE	canonical	3	34	junction_1	14.6522182620926	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	9504	False	NA	-5	True	AATAAA	-35	NA	156318058	156313796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156316172_156316258_156316404_156316643
ES.25358.23	chr4	-	2724	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	-6	5	-6	0	multi-exon	FALSE	canonical	3	34	junction_1	16.0850014835956	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8242	False	NA	-5	True	AATAAA	-35	NA	156319320	156313796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.24	chr4	-	3253	9	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-26	0	intron_retention	FALSE	canonical	3	41	junction_5	13.3954283246188	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8279	False	NA	-5	True	AATAAA	-35	NA	156319283	156313796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.25	chr4	-	3011	10	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	10	junction_6	21.0226215606891	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8240	False	NA	-5	True	AATAAA	-35	NA	156319322	156313796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.26	chr4	-	3555	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	62	junction_4	8.67377512966528	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8241	False	NA	-5	True	AATAAA	-35	NA	156319321	156313796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.27	chr4	-	4031	6	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	36	-2	intron_retention	FALSE	canonical	3	34	junction_1	16.5166582576501	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8341	False	NA	-7	True	AATAAA	-33	NA	156319221	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.28	chr4	-	3730	8	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	62	junction_3	9.15624020512118	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8278	False	NA	-7	True	AATAAA	-33	NA	156319284	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.29	chr4	-	3528	9	NNC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	19	-2	intron_retention	FALSE	canonical	2	3	junction_4	30.1910582789011	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8267	False	NA	-7	True	AATAAA	-33	NA	156319295	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156315144_156315370_156315631_156316003_156316172_156316258_156316418_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.3	chr4	-	4440	13	NIC	ENSMUSG00000078485.5	novel	1982	16	NA	NA	243	-2	intron_retention	FALSE	canonical	3	7	junction_2	3.49106001094224	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTCTCTAGACTCTG	NA	False	NA	2	True	ATTAAA	-28	NA	156312714	156306110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309886_156309982
ES.25358.30	chr4	-	3443	10	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	25	-2	intron_retention	FALSE	canonical	2	3	junction_6	25.4053557102716	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8606	False	NA	-7	True	AATAAA	-33	NA	156318956	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316418_156316643_156316858_156317085_156317903_156318048_156318171_156318259
ES.25358.31	chr4	-	2702	12	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0984239739997	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8285	False	NA	-7	True	AATAAA	-33	NA	156319277	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314720_156314938_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.32	chr4	-	3921	7	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	34	junction_1	17.5309250564063	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8305	False	NA	-7	True	AATAAA	-33	NA	156319257	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.33	chr4	-	3119	11	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_1	33.2258935169545	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8332	False	NA	-7	True	AATAAA	-33	NA	156319230	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314720_156314938_156315144_156315357_156315432_156315541_156315631_156316000_156316155_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.34	chr4	-	2883	11	FSM	ENSMUSG00002076083.1	ENSMUST00020183325.1	2830	11	-38	-15	19	-2	multi-exon	FALSE	canonical	2	8	junction_2	26.227657158046	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8267	False	NA	-7	True	AATAAA	-33	NA	156319295	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156315144_156315357_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.35	chr4	-	3640	8	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_7	28.7075329657495	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8582	False	NA	-7	True	AATAAA	-33	NA	156318980	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156318902
ES.25358.36	chr4	-	2841	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	8	-2	intron_retention	FALSE	canonical	3	10	junction_2	20.9322717352895	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCCATCTTTGGCCCCC	8256	False	NA	-7	True	AATAAA	-33	NA	156319306	156313798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156318171_156318259_156318520_156319112
ES.25358.38	chr4	-	2946	11	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	9	-3	intron_retention	FALSE	canonical	2	8	junction_2	26.5601204816544	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCCATCTTTGGCCCC	8257	False	NA	-8	True	AATAAA	-32	NA	156319305	156313799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315370_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.39	chr4	-	3848	7	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-26	-4	intron_retention	FALSE	canonical	0	0	junction_1	27.2131504158478	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCCATCTTTGGCCC	8279	False	NA	-9	True	AATAAA	-31	NA	156319283	156313800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315541_156316172_156316258_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.4	chr4	-	7800	24	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	1982	16	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_16	26.9227698937602	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTCAAGGTTGTCTCTA	8256	False	NA	-5	True	ATTAAA	-21	NA	156319306	156306117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156312774_156312865_156314720_156315541_156315631_156316000_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.40	chr4	-	2876	11	NNC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-253	-4	intron_retention	FALSE	canonical	0	0	junction_10	28.5847861632722	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCCATCTTTGGCCC	7995	False	NA	-9	True	AATAAA	-31	NA	156319567	156313800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156315144_156315357_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319456
ES.25358.41	chr4	-	3493	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	11	-4	intron_retention	FALSE	canonical	2	2	junction_2	23.2109887768703	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCCATCTTTGGCCC	8316	False	NA	-9	True	AATAAA	-31	NA	156319246	156313800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.42	chr4	-	3519	9	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	21	-4	intron_retention	FALSE	canonical	2	4	junction_2	27.9240040108864	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCCATCTTTGGCCC	8326	False	NA	-9	True	AATAAA	-31	NA	156319236	156313800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315370_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.43	chr4	-	4199	5	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	62	junction_2	8.8140512819021	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGTCCATCTTTGGCC	8287	False	NA	-10	True	AATAAA	-30	NA	156319275	156313801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156316404_156316643_156316858_156317085_156318520_156319112
ES.25358.44	chr4	-	3835	8	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	45	junction_2	13.1986393856584	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGAATGTCCATCTTTGG	8304	False	NA	-12	True	AATAAA	-28	NA	156319258	156313803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315541_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.45	chr4	-	3413	10	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	23	4	intron_retention	FALSE	canonical	2	8	junction_2	21.6030404810224	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGCTGAATGTCCAT	8271	False	NA	-18	True	AATAAA	-22	NA	156319291	156313809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.46	chr4	-	3614	8	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	10	4	intron_retention	FALSE	canonical	3	62	junction_4	6.88387645894672	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGCTGAATGTCCAT	8315	False	NA	-18	True	AATAAA	-22	NA	156319247	156313809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.47	chr4	-	3326	10	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	23	4	intron_retention	FALSE	non_canonical	0	0	junction_9	24.6621617507919	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGCTGAATGTCCAT	8271	False	NA	-18	True	AATAAA	-22	NA	156319291	156313809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318489_156319157
ES.25358.48	chr4	-	3530	9	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-17	3	intron_retention	FALSE	canonical	3	45	junction_2	10.3312329854669	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGAGGCTGAATGTCCA	8288	False	NA	-19	True	AATAAA	-21	NA	156319274	156313810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156318171_156318259_156318520_156319112
ES.25358.49	chr4	-	3165	11	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	12	0	intron_retention	FALSE	canonical	2	8	junction_3	27.0445928052171	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCTGAGGCTGAATGT	8260	False	NA	-22	True	AATAAA	-18	NA	156319302	156313813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315370_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.5	chr4	-	4443	12	NNC	ENSMUSG00000078485.5	novel	2004	16	NA	NA	281	0	intron_retention	FALSE	canonical	0	0	junction_3	5.46665322849924	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTCAAGGTTGTCTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	156312676	156306118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156306340_156306424_156306474_156306707_156306832_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309886_156309982
ES.25358.50	chr4	-	3625	9	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	34	junction_1	16.8592519110428	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCTGAGGCTGAATGT	8262	False	NA	-22	True	AATAAA	-18	NA	156319300	156313813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.51	chr4	-	3276	10	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	12	0	intron_retention	TRUE	non_canonical	0	0	junction_8	25.4126438832287	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCTGAGGCTGAATGT	8260	False	NA	-22	True	AATAAA	-18	NA	156319302	156313813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314720_156314961_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318260_156318520_156319112
ES.25358.53	chr4	-	2817	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_10	24.204131878669	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCTGAGGCTGAATG	8583	False	NA	-23	True	AATAAA	-17	NA	156318979	156313814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156318902
ES.25358.54	chr4	-	2841	9	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-16	-3	intron_retention	FALSE	canonical	2	7	junction_2	24.2229230275786	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGCCTGAGGCTGAA	8289	False	NA	-25	True	AATAAA	-15	NA	156319273	156313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315631_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.56	chr4	-	2828	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	10	junction_7	20.8076908858239	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGCCTGAGGCTGAA	8293	False	NA	-25	True	AATAAA	-15	NA	156319269	156313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.57	chr4	-	3869	8	NNC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	-26	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	26.914831659613	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGCCTGAGGCTGAA	8279	False	NA	-25	True	AATAAA	-15	NA	156319283	156313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156315144_156315357_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318260_156318520_156319112
ES.25358.58	chr4	-	3709	8	NNC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-23	-3	intron_retention	TRUE	canonical	0	0	junction_1	26.9640728468419	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGCCTGAGGCTGAA	8282	False	NA	-25	True	AATAAA	-15	NA	156319280	156313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr4_-_156314717_156314961_156315144_156315357_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.59	chr4	-	3017	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-26	-5	intron_retention	FALSE	canonical	3	41	junction_6	12.629575323007	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATGGGCCTGAGGCTG	8279	False	NA	-27	True	AATAAA	-13	NA	156319283	156313818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.60	chr4	-	3425	10	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	20	-6	intron_retention	FALSE	canonical	2	4	junction_2	22.7715438623854	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCATGGGCCTGAGGCT	8268	False	NA	-28	True	AATAAA	-12	NA	156319294	156313819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.61	chr4	-	3113	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-8	-127	intron_retention	FALSE	canonical	3	34	junction_1	14.3767645186492	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCCCGTGTACACAG	8297	False	NA	NA	False	NA	NA	NA	156319265	156313940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156314961_156315144_156315357_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.62	chr4	-	2823	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	-13	49	intron_retention	FALSE	canonical	3	10	junction_1	21.8569987661099	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCGGTGTTCATTT	8292	False	NA	NA	False	NA	NA	NA	156319270	156314354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.63	chr4	-	3441	7	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	8	48	intron_retention	FALSE	canonical	3	62	junction_2	9.68962790249909	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCTCGGTGTTCATT	8256	False	NA	NA	False	NA	NA	NA	156319306	156314355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.64	chr4	-	2184	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	-31	570	-31	42	multi-exon	FALSE	canonical	3	34	junction_1	16.0850014835956	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTCTTGGTCTCGGTG	8217	False	NA	NA	False	NA	NA	NA	156319345	156314361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.65	chr4	-	1821	10	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	19	42	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	24.351337834316	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTCTTGGTCTCGGTG	8324	False	NA	NA	False	NA	NA	NA	156319238	156314361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156314720_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.66	chr4	-	3246	8	NIC	ENSMUSG00002076083.1	novel	2830	11	NA	NA	1	32	intron_retention	FALSE	canonical	2	2	junction_2	26.3051170625312	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTGTCCTTCGGTCTT	8306	False	NA	NA	False	NA	NA	NA	156319256	156314371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr4_-_156315144_156315357_156315432_156315560_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.7	chr4	-	5469	27	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	2004	16	NA	NA	10	0	multi-exon	TRUE	canonical	2	4	junction_14	27.198617481398	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTCAAGGTTGTCTCT	8258	False	NA	-6	True	ATTAAA	-20	NA	156319304	156306118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312774_156312865_156314720_156314961_156315144_156315357_156315462_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.8	chr4	-	5427	27	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	1982	16	NA	NA	48	-1	multi-exon	FALSE	canonical	0	0	junction_14	26.5462920443096	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGGTCAAGGTTGTCTC	8353	False	NA	-7	True	ATTAAA	-19	NA	156319209	156306119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310144_156312673_156312774_156312865_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316000_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ES.25358.9	chr4	-	4438	22	Fusion	ENSMUSG00002076083.1_ENSMUSG00000078485.5	novel	2004	16	NA	NA	-390	2	multi-exon	TRUE	canonical	0	0	junction_3	22.3363283604502	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGGTCAAGGTTGTCT	NA	False	NA	-8	True	ATTAAA	-18	NA	156316699	156306120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr4_-_156306340_156306424_156306474_156306707_156306939_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312774_156312865_156314720_156314959_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643
ES.25359.1	chr4	-	2925	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324823_156325054_156326258_156327022
ES.25359.10	chr4	-	3157	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156326258_156327022
ES.25359.12	chr4	-	2838	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156324823_156325054_156326258_156327022
ES.25359.13	chr4	-	2998	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156325957_156326115_156326258_156327022
ES.25359.14	chr4	-	3777	2	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324823_156325054
ES.25359.15	chr4	-	2092	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323937_156324523_156324625_156324711_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.16	chr4	-	2108	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.17	chr4	-	3070	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156326258_156327022
ES.25359.19	chr4	-	3244	2	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156326258_156327022
ES.25359.2	chr4	-	4049	1	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323200_156327200
ES.25359.20	chr4	-	3691	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	370	False	NA	NA	False	NA	NA	NA	156327192	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324823_156325054
ES.25359.22	chr4	-	3030	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325056
ES.25359.24	chr4	-	2769	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323765_156323848_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.25	chr4	-	2753	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324823_156325054_156325957_156327020
ES.25359.26	chr4	-	3618	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324823_156325054_156325957_156326115
ES.25359.27	chr4	-	1321	8	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	372	False	NA	NA	False	NA	NA	NA	156327190	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156325169_156325914_156325957_156326115_156326258_156327022
ES.25359.28	chr4	-	2267	6	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156326258_156327022
ES.25359.29	chr4	-	2056	6	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	372	False	NA	NA	False	NA	NA	NA	156327190	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324823_156325054_156325169_156325877_156325957_156326115_156326258_156327022
ES.25359.3	chr4	-	3962	2	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	331	False	NA	NA	False	NA	NA	NA	156327231	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843
ES.25359.30	chr4	-	2766	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.31	chr4	-	2850	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	374	False	NA	NA	False	NA	NA	NA	156327188	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.32	chr4	-	3444	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156324823_156325054_156325957_156326115
ES.25359.35	chr4	-	1970	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156324823_156325054_156325169_156325877_156325957_156326115_156326258_156327022
ES.25359.36	chr4	-	1404	8	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156325168_156325831_156325957_156326115_156326258_156327022
ES.25359.37	chr4	-	3079	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324823_156325054
ES.25359.38	chr4	-	2167	6	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324823_156325054_156325169_156325767_156325957_156326115_156326258_156327022
ES.25359.39	chr4	-	3065	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156325957_156326115
ES.25359.4	chr4	-	2679	6	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.42	chr4	-	2099	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324823_156325054_156325796_156325851_156325957_156326115_156326258_156327022
ES.25359.43	chr4	-	2156	6	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	370	False	NA	NA	False	NA	NA	NA	156327192	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.44	chr4	-	2924	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324627_156324714_156324823_156325054_156326258_156327022
ES.25359.46	chr4	-	3085	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156325957_156326115_156326258_156327022
ES.25359.47	chr4	-	2080	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156324625_156324711_156324823_156325054_156325169_156325767_156325957_156326115_156326258_156327022
ES.25359.48	chr4	-	3079	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323940_156324550_156324625_156324711_156324823_156325054
ES.25359.49	chr4	-	3691	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	370	False	NA	NA	False	NA	NA	NA	156327192	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324625_156324711_156324823_156325054
ES.25359.5	chr4	-	3012	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324823_156325054_156326258_156327022
ES.25359.50	chr4	-	3166	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323940_156324550_156324823_156325054
ES.25359.52	chr4	-	1555	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	372	False	NA	NA	False	NA	NA	NA	156327190	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323940_156324550_156324625_156324711_156324823_156325054_156325169_156325767_156325957_156326115_156326258_156327022
ES.25359.55	chr4	-	2056	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	371	False	NA	NA	False	NA	NA	NA	156327191	156323199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156325963_156326116_156326258_156327022
ES.25359.56	chr4	-	804	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	372	False	NA	NA	False	NA	NA	NA	156327190	156323199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323633_156325895_156325957_156326115_156326258_156327022
ES.25359.58	chr4	-	3294	3	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	371	False	NA	NA	False	NA	NA	NA	156327191	156323199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550
ES.25359.59	chr4	-	2078	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	371	False	NA	NA	False	NA	NA	NA	156327191	156323199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323765_156323824_156323940_156324550_156324625_156324711_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.6	chr4	-	2766	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324625_156324711_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.60	chr4	-	2045	7	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	370	False	NA	NA	False	NA	NA	NA	156327192	156323199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324718_156324823_156325054_156325957_156326115_156326258_156327022
ES.25359.61	chr4	-	2914	5	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATC	371	False	NA	NA	False	NA	NA	NA	156327191	156323200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324625_156324711_156324823_156325054_156325169_156325767_156325957_156326115
ES.25359.7	chr4	-	2547	4	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	370	False	NA	NA	False	NA	NA	NA	156327192	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323940_156324550_156324625_156324711_156326258_156327022
ES.25359.8	chr4	-	1359	8	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156323757_156323843_156323940_156324550_156324625_156324711_156324823_156325054_156325169_156325877_156325957_156326115_156326258_156327022
ES.25359.9	chr4	-	3922	2	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr4_-_156324625_156324711
ES.2536.1	chr10	+	131	1	Intergenic	novelGene_1926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	AAAAAG	-30	NA	30459266	30459397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30459300_30459400
ES.25360.1	chr4	+	181	1	Intergenic	novelGene_21136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156372633	156372814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156372600_156372800
ES.25361.1	chr4	-	177	1	Intergenic	novelGene_21137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	156374393	156374216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156374200_156374400
ES.25362.1	chr4	+	1371	7	Intergenic	novelGene_21140	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTGTGTGGGAGG	NA	False	NA	21	True	AATAAA	-31	NA	156390228	156409729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.10	chr4	+	1068	7	Intergenic	novelGene_21150	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	33.1963853453957	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTCACAACTGTGTGT	NA	False	NA	11	True	AATAAA	-21	NA	156390507	156409719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.11	chr4	+	1339	6	Intergenic	novelGene_21149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	36.3351069903475	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGCCTCAGCTCACAAC	NA	False	NA	4	True	AATAAA	-14	NA	156390507	156409712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156409051_156409451
ES.25362.12	chr4	+	2244	4	Intergenic	novelGene_21151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	48.3620604284897	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390508	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405347_156408304_156409051_156409451
ES.25362.13	chr4	+	1934	5	Intergenic	novelGene_21152	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_3	41.2878614122844	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390514	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156408356_156409051_156409451
ES.25362.14	chr4	+	1899	7	Intergenic	novelGene_21153	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	37.5011110946507	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390898	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156391152_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.15	chr4	+	1941	5	Intergenic	novelGene_21155	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_3	7.69334127671456	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156404900	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
ES.25362.16	chr4	+	1658	6	Intergenic	novelGene_21156	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_4	10.6282642044691	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156404905	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.2	chr4	+	3730	7	Intergenic	novelGene_21141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGCCACTTAATGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	156390350	156412210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.3	chr4	+	1910	7	Intergenic	novelGene_21142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390362	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.4	chr4	+	1807	6	Intergenic	novelGene_21143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_3	36.9778311965426	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390363	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156408356_156408565_156408842_156409051_156409451
ES.25362.5	chr4	+	1863	7	Intergenic	novelGene_21144	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	33.1963853453957	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390395	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
ES.25362.6	chr4	+	2133	6	Intergenic	novelGene_21145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390417	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
ES.25362.7	chr4	+	2108	6	Intergenic	novelGene_21146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_2	36.3351069903475	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390428	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405012_156405277_156405347_156405588_156405691_156408356_156409051_156409451
ES.25362.8	chr4	+	1373	6	Intergenic	novelGene_21147	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGCCTCAGCTCACAAC	NA	False	NA	4	True	AATAAA	-14	NA	156390487	156409712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
ES.25362.9	chr4	+	1717	6	Intergenic	novelGene_21148	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	38.9327625528937	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	156390505	156410402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156408304_156408565_156408842_156409051_156409451
ES.25363.1	chr4	-	6518	1	Intergenic	novelGene_21138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCTTTAAAAATAGCCAAAA	NA	False	NA	NA	False	AAAACA	-39	NA	156390587	156384069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156384100_156390600
ES.25363.2	chr4	-	1081	1	Intergenic	novelGene_21139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTGTGTTTTTAT	NA	False	NA	NA	False	TTTAAA	-38	NA	156390746	156389665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156389700_156390700
ES.25364.1	chr4	-	176	1	Intergenic	novelGene_21154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	156396846	156396670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr4_-_156396700_156396800
ES.25365.1	chr5	+	230	1	Intergenic	novelGene_21157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGGAAAAGAATTGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	3197041	3197271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3197000_3197300
ES.25366.1	chr5	+	499	2	Genic_Genomic	ENSMUSG00000062353.7	novel	438	1	NA	NA	-41	71	multi-exon	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGACCATGTTATTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	3286389	3286939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_3286695_3286745
ES.25366.2	chr5	+	533	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	-22	-73	-22	73	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACCATGTTATTATTAA	NA	False	NA	NA	False	NA	NA	NA	3286408	3286941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3286400_3286900
ES.25367.1	chr5	+	680	2	Intergenic	novelGene_21158	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGAACTTCTAC	29	False	NA	NA	False	NA	NA	NA	3343955	3348060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3344033_3347457
ES.25367.10	chr5	+	3710	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-280	677	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTTCTTTTTTCAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	3391204	3572902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.11	chr5	+	3297	8	NNC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-264	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.8784797075134	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGAGCTTTGAAAGAC	NA	False	NA	NA	False	AGTAAA	-17	NA	3391220	3572508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479156_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.12	chr5	+	1868	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-263	-1148	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTTCTAACCTT	NA	False	NA	27	True	NA	NA	NA	3391221	3571077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.13	chr5	+	3143	6	NNC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-196	-11189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.6295223889708	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	3391288	3561036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3559074
ES.25367.14	chr5	+	3015	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-154	108	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTTCTTTCAGTCCTT	NA	False	NA	NA	False	TATAAA	-13	NA	3391330	3572333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.15	chr5	+	2329	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-126	-550	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGAGATGTTATC	NA	False	NA	NA	False	TTTAAA	-18	NA	3391358	3571675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.16	chr5	+	4295	5	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-61	3297	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.224980739588	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	3391423	3526477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118
ES.25367.17	chr5	+	4320	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-29	1538	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGGCGTATTGTGGTG	NA	False	NA	NA	False	TTTAAA	-22	NA	3391455	3573763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.18	chr5	+	1669	9	NNC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-29	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.5156221947934	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCTGCCATTTCGTT	NA	False	NA	17	True	NA	NA	NA	3391455	3571067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3567455_3567501_3569358_3569495_3570644
ES.25367.2	chr5	+	3328	2	Intergenic	novelGene_21159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAATTTACTTTTCTA	37	False	NA	NA	False	NA	NA	NA	3343963	3350716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3344033_3347457
ES.25367.20	chr5	+	3887	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	9	1143	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGTCAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	3391493	3573368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.21	chr5	+	1603	8	NNC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-881	-1146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1775666198075	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGTTTTCTAACCTTGA	NA	False	NA	29	True	NA	NA	NA	3392850	3571079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3392937_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.22	chr5	+	2610	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	-1023	9938	-862	-1155	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGCCATTTCGTTTTC	NA	False	NA	20	True	NA	NA	NA	3392869	3571070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.23	chr5	+	1760	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-462	1172	-43	-1172	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGCTGACCAATTGT	NA	False	NA	3	True	NA	NA	NA	3393849	3571053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.24	chr5	+	3859	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	-17	7683	-17	1100	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCCCGTATTCTTTAG	NA	False	NA	NA	False	AATACA	-16	NA	3393875	3573325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.25	chr5	+	5778	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	-1	5748	-1	3035	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTGCCTTTAAGT	NA	False	NA	NA	False	CATAAA	-10	NA	3393891	3575260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.26	chr5	+	3863	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-399	-994	-3	994	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	GATAAA	-33	NA	3393912	3573219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.27	chr5	+	3536	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-395	-671	1	671	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGGATTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	3393916	3572896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.28	chr5	+	5146	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-80	-2596	-80	2596	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGATTTTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	3394231	3574821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.29	chr5	+	2794	1	Intergenic	novelGene_21166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAGAAGAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	3406728	3409522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3406700_3409500
ES.25367.3	chr5	+	2010	1	Intergenic	novelGene_21160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAAGCTTCGTATATTC	48	False	NA	NA	False	AATAAA	-22	NA	3343974	3345984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3344000_3346000
ES.25367.30	chr5	+	183	1	Intergenic	novelGene_21167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATAATCTGATGTT	NA	False	NA	NA	False	NA	NA	NA	3421645	3421828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3421600_3421800
ES.25367.31	chr5	+	2095	1	Intergenic	novelGene_21168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTCAATTTGATAT	NA	False	NA	NA	False	GATAAA	-21	NA	3443380	3445475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3443400_3445500
ES.25367.32	chr5	+	3046	5	NNC	ENSMUSG00000040274.12	novel	11525	8	NA	NA	2037	1143	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	42.6577953016796	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGTCAGCTGTCTT	723	False	NA	NA	False	NA	NA	NA	3522985	3573368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3523011_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.33	chr5	+	3009	4	ISM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	128699	-1023	2062	1023	3prime_fragment	FALSE	canonical	3	75	junction_2	17.1723291631883	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGGAAGAAAAAGAAAA	748	False	NA	NA	False	NA	NA	NA	3523010	3573248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.34	chr5	+	178	1	Intergenic	novelGene_21170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAGAAGGAGAAGA	4524	False	NA	NA	False	NA	NA	NA	3526786	3526964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3526800_3527000
ES.25367.35	chr5	+	4671	2	ISM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	173117	-1024	46480	1024	3prime_fragment	FALSE	canonical	3	117	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAGAAAAAGAAAAA	9682	False	NA	NA	False	NA	NA	NA	3567428	3573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3569495_3570644
ES.25367.36	chr5	+	2778	1	ISM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	179298	5040	52242	3743	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTCTTCTTCTTC	1506	False	NA	NA	False	AATAAA	-11	NA	3573190	3575968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3573200_3576000
ES.25367.37	chr5	+	6940	1	ISM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	180176	0	53120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGATTTCAGACTCCTTC	2384	False	NA	NA	False	AATAAA	-22	NA	3574068	3581008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3574100_3581000
ES.25367.4	chr5	+	919	3	Intergenic	novelGene_21161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	20	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAGAAGAGAAGAG	48	False	NA	NA	False	NA	NA	NA	3343974	3409522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3344033_3347457_3348287_3409490
ES.25367.5	chr5	+	6256	1	Intergenic	novelGene_21162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTCTAGGTTCAAA	251	False	NA	NA	False	NA	NA	NA	3344468	3350724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3344500_3350700
ES.25367.6	chr5	+	3144	4	Intergenic	novelGene_21163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGGGCTCAAACACAA	NA	False	NA	NA	False	AATAAA	-29	NA	3357015	3389959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3357123_3358482_3358551_3364411_3364475_3387053
ES.25367.7	chr5	+	174	1	Intergenic	novelGene_21164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAATCATG	NA	False	NA	NA	False	NA	NA	NA	3365593	3365767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3365600_3365800
ES.25367.8	chr5	+	4059	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-282	1024	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3391202	3573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25367.9	chr5	+	2259	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	-280	-774	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGGGGGGAACCACA	NA	False	NA	NA	False	AATAAA	-15	NA	3391204	3571451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ES.25368.1	chr5	-	4244	4	Antisense	novelGene_ENSMUSG00000040274.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATATTCTTATGGTTCA	NA	False	NA	NA	False	NA	NA	NA	3391569	3336559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_3340456_3364586_3364785_3380206_3380285_3391497
ES.25368.2	chr5	-	246	1	Intergenic	novelGene_21165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAAACGTTTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	3367756	3367510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3367500_3367800
ES.25369.1	chr5	-	170	1	Intergenic	novelGene_21169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAAGGTAATAG	NA	False	NA	NA	False	NA	NA	NA	3518921	3518751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3518800_3518900
ES.2537.1	chr10	+	5599	1	Antisense	novelGene_ENSMUSG00000019792.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCATGGCATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	30460232	30465831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_30460200_30465800
ES.25370.1	chr5	-	3536	1	Antisense	novelGene_ENSMUSG00000040274.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAGAAACACATCCTGC	NA	False	NA	NA	False	NA	NA	NA	3575765	3572229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_3572200_3575800
ES.25370.2	chr5	-	680	2	Antisense	novelGene_ENSMUSG00000040274.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3573331	3572261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_3572369_3572758
ES.25371.1	chr5	+	2016	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-23	-502	-18	4	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTTTGTGTATCAGTA	NA	False	NA	23	True	AGTAAA	-19	NA	3593814	3620242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.10	chr5	+	5228	10	ISM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-1	-500	1	2	intron_retention	FALSE	canonical	3	148	junction_9	23.3655861746276	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTCTTTGTGTATCAG	NA	False	NA	21	True	AGTAAA	-17	NA	3593836	3620240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702
ES.25371.11	chr5	+	5953	11	FSM	ENSMUSG00000008307.12_ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-1	-4461	1	3963	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACTTATATTCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	3593836	3624201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.12	chr5	+	2389	10	NNC	ENSMUSG00000058503.12	novel	1961	10	NA	NA	4	3	intron_retention	FALSE	canonical	2	38	junction_9	52.1514887398028	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	22	True	AGTAAA	-18	NA	3593847	3620241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615755_3618986
ES.25371.13	chr5	+	1918	11	NNC	ENSMUSG00000058503.12	novel	1491	11	NA	NA	11	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.8971116280957	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGCAAGACTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	3593854	3620090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609002_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.14	chr5	+	2041	12	NNC	ENSMUSG00000058503.12	novel	1450	11	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.8153293621404	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	22	True	AGTAAA	-18	NA	3593858	3620241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3612241_3612353_3614240_3614328_3615702_3615751_3618986
ES.25371.16	chr5	+	5351	12	Fusion	ENSMUSG00000008307.12_ENSMUSG00000058503.12	novel	1450	11	NA	NA	26	3328	multi-exon	FALSE	canonical	0	0	junction_8	89.8153293621404	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGCACAGGTT	NA	False	NA	NA	False	NA	NA	NA	3593869	3623566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3612245_3612353_3614240_3614328_3615702_3615751_3618986
ES.25371.17	chr5	+	1060	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	38	393	32	316	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTACTTAAGAATAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	3593875	3619347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.19	chr5	+	2263	5	NIC	ENSMUSG00000058503.12	novel	1961	10	NA	NA	-793	-5	intron_retention	FALSE	canonical	0	0	junction_4	82.9890806070293	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTTTGTTGTCTTTGT	NA	False	NA	14	True	AGTAAA	-10	NA	3608868	3620233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.2	chr5	+	2315	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-20	-804	-15	306	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTGTGCTCTTATC	NA	False	NA	4	True	AATAAA	-15	NA	3593817	3620544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.20	chr5	+	5602	1	FSM	ENSMUSG00000058503.12	ENSMUST00000200354.2	2196	1	-2196	-1210	-393	3	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	22	True	AGTAAA	-18	NA	3614639	3620241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3614600_3620200
ES.25371.21	chr5	+	3947	4	NIC	ENSMUSG00000008307.12	novel	773	6	NA	NA	479	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.35702260395516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATATTTCTACATTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	3622151	3634349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3625779_3627239_3627345_3632142_3632248_3634239
ES.25371.22	chr5	+	4880	2	NIC	ENSMUSG00000008307.12	novel	773	6	NA	NA	-738	0	intron_retention	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTACATTTGTTTCAAT	NA	False	NA	NA	False	ATTAAA	-33	NA	3627484	3634356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3632248_3634239
ES.25371.23	chr5	+	4860	1	FSM	ENSMUSG00000008307.12	ENSMUST00000198134.2	2227	1	1262	-3895	-1013	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATGACATATTTCTAC	NA	False	NA	NA	False	ATTAAA	-21	NA	3629484	3634344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3629500_3634300
ES.25371.3	chr5	+	3447	7	NIC	ENSMUSG00000058503.12	novel	1961	10	NA	NA	-8	350	intron_retention	FALSE	canonical	0	0	junction_6	75.904911274275	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATTCATCTTTTAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	3593824	3619381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.4	chr5	+	2706	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	-14	-731	-3	306	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTGTGCTCTTATC	NA	False	NA	4	True	AATAAA	-15	NA	3593829	3620544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.6	chr5	+	1539	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	-12	434	-1	348	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGATTCATCTTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	3593831	3619379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.7	chr5	+	2260	11	FSM	ENSMUSG00000058503.12	ENSMUST00000199666.5	1450	11	-6	-804	-1	306	multi-exon	FALSE	canonical	0	0	junction_10	76.7604064606227	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTGTGCTCTTATC	NA	False	NA	4	True	AATAAA	-15	NA	3593831	3620544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.8	chr5	+	1956	11	FSM	ENSMUSG00000058503.12	ENSMUST00000199666.5	1450	11	-5	-501	0	3	multi-exon	FALSE	canonical	0	0	junction_10	76.7604064606227	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTTTGTGTATCAGT	NA	False	NA	22	True	AGTAAA	-18	NA	3593832	3620241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25371.9	chr5	+	1566	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-5	-70	0	-3	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTTGTGTCATTTG	NA	False	NA	NA	False	NA	NA	NA	3593832	3619810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ES.25372.1	chr5	+	2383	1	Intergenic	novelGene_21174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCACCTTAGTTTCTCT	NA	False	NA	NA	False	AAAACA	-36	NA	3636799	3639182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3636800_3639200
ES.25373.1	chr5	+	4284	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	140	131	7	-129	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGACCTCATTTGTTTT	NA	False	NA	14	True	ATTAAA	-22	NA	3646205	3687101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.10	chr5	+	4366	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.136659066484	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	3646257	3687230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670589_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.13	chr5	+	4158	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-53	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.8689641258699	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTCAATGGTGGACCTCA	NA	False	NA	6	True	ATTAAA	-14	NA	3646317	3687093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660283_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.14	chr5	+	4137	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-52	133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	19.0096980522524	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCAATGGTGGACCTCAT	NA	False	NA	7	True	ATTAAA	-15	NA	3646318	3687094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681739_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.16	chr5	+	5574	20	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	253	3173	-52	-1852	intron_retention	FALSE	canonical	3	55	junction_8	11.6452646327016	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGCCAATTAGTCATTTT	NA	False	NA	5	True	AATAAA	-20	NA	3646318	3684059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588
ES.25373.17	chr5	+	3937	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-52	55	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	19.0479446817066	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTTTGTTTTAATG	NA	False	NA	NA	False	CATAAA	-18	NA	3646318	3686873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673946_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.19	chr5	+	6552	26	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-22	-132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5815077370982	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGGACCTCATTTGT	NA	False	NA	11	True	ATTAAA	-19	NA	3646348	3687098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646827_3649515_3649751_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3657879_3659750_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.2	chr5	+	3736	21	ISM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	143	3171	10	-1850	5prime_fragment	FALSE	canonical	3	55	junction_8	11.6275534829989	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATTAGTCATTTTTT	NA	False	NA	7	True	AATAAA	-22	NA	3646208	3684061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715
ES.25373.20	chr5	+	3769	23	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-19	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	19.2701542021647	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAGACTGGAAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	3646351	3686963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3685314_3685513_3685779_3685911_3686770
ES.25373.21	chr5	+	5005	23	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-10	134	intron_retention	FALSE	canonical	0	0	junction_17	19.2422572171229	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAATGGTGGACCTCATT	NA	False	NA	8	True	ATTAAA	-16	NA	3646360	3687095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677605_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779
ES.25373.23	chr5	+	4030	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_19	18.8686635729284	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACTGGAAAGTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	3646369	3686967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680337_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.24	chr5	+	3956	23	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	13	133	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	18.8008264281165	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCAATGGTGGACCTCAT	NA	False	NA	7	True	ATTAAA	-15	NA	3646383	3687094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.25	chr5	+	5720	25	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	13	1241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6665199525969	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCACGTGTT	NA	False	NA	NA	False	NA	NA	NA	3646383	3688473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3650619_3650862_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.26	chr5	+	2604	1	Intergenic	novelGene_21175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGTTTTTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	3650463	3653067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3650500_3653100
ES.25373.27	chr5	+	2938	1	Genic_Genomic	ENSMUSG00000005907.15	novel	NA	NA	NA	NA	-3689	29	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATTGACTGTAAGCCGG	7994	False	NA	NA	False	NA	NA	NA	3665208	3668146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_3665200_3668100
ES.25373.28	chr5	+	3031	8	NIC	ENSMUSG00000005907.15	novel	4433	23	NA	NA	-191	-131	intron_retention	FALSE	canonical	0	0	junction_4	28.5478474116129	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGGACCTCATTTGTT	NA	False	NA	12	True	ATTAAA	-20	NA	3669579	3687099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3681588_3681766_3683715_3683947_3685314_3685911_3686770
ES.25373.29	chr5	+	1546	10	ISM	ENSMUSG00000005907.15	ENSMUST00000006061.13	4433	23	28352	267	351	2	3prime_fragment	FALSE	canonical	3	71	junction_7	8.91939210683977	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAGACTGGAAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	3674417	3686963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.3	chr5	+	3994	24	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	12	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.7117222191902	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACTGGAAAGTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	3646210	3686967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.30	chr5	+	4351	3	NIC	ENSMUSG00000005907.15	novel	4433	23	NA	NA	483	-1848	intron_retention	FALSE	canonical	3	85	junction_2	6.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTAGTCATTTTTTAG	NA	False	NA	9	True	AATAAA	-24	NA	3677686	3684063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3680113_3680188_3681766_3683715
ES.25373.31	chr5	+	2046	5	ISM	ENSMUSG00000005907.15	ENSMUST00000006061.13	4433	23	34407	267	3269	2	3prime_fragment	FALSE	canonical	3	71	junction_2	7.17635004720366	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACAGACTGGAAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	3680472	3686963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.4	chr5	+	4126	24	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	14	-129	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.7117222191902	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGACCTCATTTGTTTT	NA	False	NA	14	True	ATTAAA	-22	NA	3646212	3687101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.5	chr5	+	4076	20	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	17	-131	intron_retention	FALSE	canonical	0	0	junction_16	23.7971575853351	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGGACCTCATTTGTT	NA	False	NA	12	True	ATTAAA	-20	NA	3646215	3687099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3681588_3681766_3683715_3683947_3685314_3685911_3686770
ES.25373.6	chr5	+	4089	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	18	-133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	22.9496860705597	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGTGGACCTCATTTG	NA	False	NA	10	True	ATTAAA	-18	NA	3646216	3687097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676113_3677524_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.7	chr5	+	4128	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	162	265	29	6	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACTGGAAAGTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	3646227	3686967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ES.25373.8	chr5	+	3998	24	NNC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	31	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	23.5073893381882	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACTGGAAAGTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	3646229	3686967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683844_3683947_3685314_3685513_3685779_3685915_3686773
ES.25373.9	chr5	+	3563	21	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	33	-1849	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	18.2909813842779	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATTAGTCATTTTTTA	NA	False	NA	8	True	AATAAA	-23	NA	3646231	3684062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715
ES.25374.1	chr5	-	179	1	Intergenic	novelGene_21171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGGTGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	3601075	3600896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3600900_3601100
ES.25375.1	chr5	-	175	1	Intergenic	novelGene_21172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	3621080	3620905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3620900_3621100
ES.25376.1	chr5	-	202	1	Intergenic	novelGene_21173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCAGTGGTAATTATTT	NA	False	NA	NA	False	AATAGA	-6	NA	3626209	3626007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3626000_3626200
ES.25377.1	chr5	-	3185	8	NNC	ENSMUSG00000040302.18	novel	2368	5	NA	NA	-23	5800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.7444794286556	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACAAATGACCTCAGA	1954	False	NA	NA	False	NA	NA	NA	3646105	3628177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3628817_3628902_3628953_3629344_3629478_3633502_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ES.25377.10	chr5	-	3092	4	ISM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	491	4200	-12	2601	5prime_fragment	FALSE	canonical	3	107	junction_1	32.6019767635168	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	1965	False	NA	NA	False	NA	NA	NA	3646094	3638177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_3640804_3641669_3641816_3645254_3645446_3645965
ES.25377.12	chr5	-	807	3	NNC	ENSMUSG00000040302.18	novel	2368	5	NA	NA	-40	-1135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGAAGTACTTAATT	1937	False	NA	NA	False	AATAAA	-18	NA	3646122	3643391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3643851_3645254_3645446_3645965
ES.25377.2	chr5	-	2420	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	-36	-16	-36	16	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTTCTCCTCCTTTGT	1438	False	NA	7	True	AATAAA	-37	NA	3646621	3633961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ES.25377.4	chr5	-	2022	6	NNC	ENSMUSG00000040302.18	novel	2368	5	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.1262282685078	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTGCTATCTGCGT	1968	False	NA	-12	True	AATAAA	-18	NA	3646091	3633980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3634808_3640222_3640804_3640891_3641043_3641669_3641816_3645254_3645446_3645965
ES.25377.7	chr5	-	2126	5	NNC	ENSMUSG00000040302.18	novel	2368	5	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.8435824215147	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTGCTATCTGCG	1951	False	NA	-13	True	AATAAA	-17	NA	3646108	3633981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3634808_3640222_3641043_3641669_3641816_3645254_3645446_3645965
ES.25377.9	chr5	-	1386	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	485	497	-18	301	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAAATGTTTCCATCT	1959	False	NA	NA	False	TTTAAA	-19	NA	3646100	3634474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ES.25378.1	chr5	-	2573	1	FSM	ENSMUSG00000104950.2	ENSMUST00000199632.2	1946	1	-558	-69	-558	69	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTCTCCTACCTT	NA	False	NA	NA	False	CATAAA	-11	NA	3682280	3679707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3679700_3682300
ES.25378.11	chr5	-	1276	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-29	1298	-29	31	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCATTTCTCTTTATAAA	NA	False	NA	-5	True	AATATA	-14	NA	3697963	3691258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.12	chr5	-	1249	5	NNC	ENSMUSG00000007415.16	novel	2545	5	NA	NA	-28	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	173.312578885665	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGATATGCCACACTCA	NA	False	NA	-19	True	AATAAA	-34	NA	3697962	3691272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3691581_3693557_3693730_3694880_3694941_3696783_3696910_3697379
ES.25378.13	chr5	-	1462	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-175	-9	-47	9	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATGCATACAATTTCA	NA	False	NA	1	True	NA	NA	NA	3697981	3693067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.14	chr5	-	1298	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	-157	137	-29	-137	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGATCCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	3697963	3693213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.15	chr5	-	1691	1	NIC	ENSMUSG00000007415.16	novel	2545	5	NA	NA	20	-3147	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTATGTCTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	3697914	3696223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3696200_3697900
ES.25378.2	chr5	-	3237	6	Fusion	ENSMUSG00000007415.16_ENSMUSG00000104950.2	novel	2545	5	NA	NA	-12	2	intron_retention	FALSE	canonical	0	0	junction_1	171.514897312158	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGCTACTTATTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	3697946	3679774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_3681848_3691353_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.3	chr5	-	3132	6	Fusion	ENSMUSG00000007415.16_ENSMUSG00000104950.2	novel	2545	5	NA	NA	38	-3	intron_retention	FALSE	canonical	0	0	junction_1	171.514897312158	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAATAGTGCTACTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	3697896	3679779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_3681798_3691353_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.4	chr5	-	3326	1	Genic_Genomic	ENSMUSG00000007415.16	novel	NA	NA	NA	NA	5588	306	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAAAACTTGCCTTGGGG	NA	False	NA	NA	False	AATAAA	-26	NA	3685951	3682625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_3682600_3686000
ES.25378.5	chr5	-	1947	1	Intergenic	novelGene_21176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGTAAATGTCATGT	NA	False	NA	NA	False	TTTAAA	-10	NA	3689232	3687285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3687300_3689200
ES.25378.6	chr5	-	2607	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-60	-2	-60	2	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTGGATTTTTAAAT	NA	False	NA	54	True	ATTAAA	-19	NA	3697994	3689958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.7	chr5	-	2507	5	NNC	ENSMUSG00000007415.16	novel	2545	5	NA	NA	-1	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.312578885665	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTTTCTAAATGCT	NA	False	NA	-6	True	AATAAA	-21	NA	3697935	3690018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3691581_3693557_3693761_3694880_3694941_3696783_3696910_3697379
ES.25378.8	chr5	-	1794	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-130	881	-130	448	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTAGATTTCTCTCT	NA	False	NA	NA	False	CATAAA	-31	NA	3698064	3690841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25378.9	chr5	-	1586	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	-32	991	-32	338	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGCAGATTCCAGGGA	NA	False	NA	0	True	AATAAA	-23	NA	3697966	3690951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ES.25379.1	chr5	+	112	1	Intergenic	novelGene_21177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3699903	3700015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3699900_3700000
ES.2538.1	chr10	-	2088	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-3	-128	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	55.0748551466228	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAATGTCCATCATGGAA	NA	False	NA	NA	False	NA	NA	NA	30476676	30410348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30473735_30473802_30476585
ES.2538.10	chr10	-	1713	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476676	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ES.2538.11	chr10	-	1810	13	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	78.5208305695586	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476662	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30443756_30443868_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ES.2538.12	chr10	-	1671	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	51.2211216763663	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476709	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ES.2538.13	chr10	-	1864	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	66.8425687274422	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476685	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30471570_30471631_30473735_30473802_30476585
ES.2538.15	chr10	-	1980	13	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	77.876460214596	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476722	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30475369_30475591_30476585
ES.2538.17	chr10	-	1635	11	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	57.934100493578	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476672	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30473735_30473802_30476585
ES.2538.18	chr10	-	3023	9	NIC	ENSMUSG00000019792.9	novel	1576	11	NA	NA	2867	-6	intron_retention	FALSE	canonical	3	12	junction_7	75.5926583736807	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTATGTGATACTCA	NA	False	NA	-8	True	AATAAA	-17	NA	30473779	30410716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30470110_30470185_30473735
ES.2538.19	chr10	-	1555	11	FSM	ENSMUSG00000019792.9	ENSMUST00000215595.2	1576	11	15	6	-3	-6	multi-exon	FALSE	canonical	3	12	junction_8	70.5592658691968	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTATGTGATACTCA	NA	False	NA	-8	True	AATAAA	-17	NA	30476676	30410716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ES.2538.2	chr10	-	1939	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.910343616217	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCAGTATTTCTCATGG	NA	False	NA	5	True	AATAAA	-30	NA	30476689	30410703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30475369_30475489_30476585
ES.2538.20	chr10	-	1893	13	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	173	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	78.6106792292808	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTATGTGATACTCA	NA	False	NA	-8	True	AATAAA	-17	NA	30476473	30410716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30475369_30475548_30476379
ES.2538.21	chr10	-	2444	18	Fusion	ENSMUSG00000019792.9_ENSMUSG00000019791.13	novel	2359	13	NA	NA	38	-8	multi-exon	FALSE	canonical	0	0	junction_13	74.8972075280629	171	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAAATTATGTGATACT	NA	False	NA	-10	True	AATAAA	-15	NA	30494437	30410718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30443756_30443865_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30484338_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.22	chr10	-	653	6	ISM	ENSMUSG00000019792.9	ENSMUST00000216790.2	1921	7	-15	22215	3	2541	5prime_fragment	FALSE	canonical	3	12	junction_3	73.6027173411417	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATAGATGTTGCTTAT	NA	False	NA	NA	False	TATAAA	-16	NA	30476688	30463409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
ES.2538.23	chr10	-	5803	5	FSM	ENSMUSG00000111080.2_ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	18	-4946	18	0	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTAGTGTACACTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	30494457	30479190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.24	chr10	-	3994	5	FSM	ENSMUSG00000111080.2_ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	121	-3240	7	-1706	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGATTGTACTTGGTT	NA	False	NA	NA	False	AATAAA	-40	NA	30494354	30480896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.25	chr10	-	3818	5	FSM	ENSMUSG00000111080.2_ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	-10	-2933	-10	-2013	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTATCACGATGATAG	NA	False	NA	NA	False	AATAAA	-20	NA	30494485	30481203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.26	chr10	-	5900	1	FSM	ENSMUSG00000111080.2	ENSMUST00000214634.2	3440	1	-4475	2015	-4475	-2015	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTCTTATCACGATGAT	NA	False	NA	NA	False	AATAAA	-18	NA	30487105	30481205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30481200_30487100
ES.2538.27	chr10	-	1732	6	FSM	ENSMUSG00000019791.13	ENSMUST00000216617.2	687	6	-12	-1033	-12	943	multi-exon	TRUE	canonical	2	5	junction_5	98.2148664917893	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGCATGTGTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	30505640	30483193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30505319_30505398_30505527
ES.2538.28	chr10	-	964	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	99	-188	-15	188	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATTTCATACTACAAT	NA	False	NA	NA	False	GATAAA	-10	NA	30494376	30483948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.29	chr10	-	671	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	-11	215	-11	-7	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTGGTTTGTT	NA	False	NA	-5	True	AATAAA	-35	NA	30494486	30484351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ES.2538.30	chr10	-	596	6	FSM	ENSMUSG00000019791.13	ENSMUST00000216617.2	687	6	-38	129	-38	-11	multi-exon	FALSE	canonical	2	5	junction_5	98.2148664917893	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGAAGAACTGTTGGTT	NA	False	NA	-9	True	AATAAA	-31	NA	30505666	30484355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30505319_30505398_30505527
ES.2538.5	chr10	-	1904	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	66.1414120693877	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476688	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30471580_30471678_30473735_30473802_30476585
ES.2538.6	chr10	-	1841	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	23	495	23	-5	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476722	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ES.2538.7	chr10	-	3530	2	ISM	ENSMUSG00000019792.9	ENSMUST00000215595.2	1576	11	50034	5	39448	-5	3prime_fragment	FALSE	canonical	3	180	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30426657	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_30411241_30423652
ES.2538.8	chr10	-	2027	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	66.0214238135385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476687	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30475369_30475591_30476585
ES.2538.9	chr10	-	1911	14	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	65.9269813043592	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTGATACTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	30476681	30410715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30443756_30443868_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ES.25380.1	chr5	+	167	1	Intergenic	novelGene_21178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTAACTATTATA	NA	False	NA	NA	False	NA	NA	NA	3763705	3763872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_3763700_3763900
ES.25381.1	chr5	+	3529	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-468	85	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGGTTTCCTTGCATC	7517	False	NA	8	True	ATTAAA	-15	NA	3852715	3891444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.11	chr5	+	3167	17	NNC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.8424654626357	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7976	False	NA	8	True	AATAAA	-21	NA	3853174	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853690_3856440_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.12	chr5	+	3515	16	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_1	74.1830768362225	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7976	False	NA	8	True	AATAAA	-21	NA	3853174	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853286_3856418_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.13	chr5	+	3103	17	NNC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_13	97.0501642193356	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7976	False	NA	8	True	AATAAA	-21	NA	3853174	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853286_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3863271_3863420_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881472_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.14	chr5	+	4570	15	NNC	ENSMUSG00000000600.16	novel	4293	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_14	63.7152866673457	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7976	False	NA	8	True	AATAAA	-21	NA	3853174	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886899_3890873
ES.25381.16	chr5	+	4452	16	NIC	ENSMUSG00000000600.16	novel	4293	16	NA	NA	-3	83	intron_retention	FALSE	canonical	0	0	junction_15	61.6151496522297	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATGGGTTTCCTTGCA	7982	False	NA	6	True	ATTAAA	-13	NA	3853180	3891442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.17	chr5	+	3146	18	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	81.2733437320262	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7983	False	NA	8	True	AATAAA	-21	NA	3853181	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3854256_3854427_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.18	chr5	+	5827	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-2	-2895	-2	-49	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCATATTGTCCCTGAT	7983	False	NA	NA	False	NA	NA	NA	3853181	3894254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.19	chr5	+	4262	11	ISM	ENSMUSG00000000600.16	ENSMUST00000199845.5	4293	16	0	16538	0	-325	5prime_fragment	FALSE	canonical	3	92	junction_1	41.4482810258761	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTGTAAGTAATCTA	7985	False	NA	NA	False	AATAAA	-14	NA	3853183	3874746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086
ES.25381.2	chr5	+	3415	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	-386	-99	-386	99	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCGGTCCTAGTGTCTT	7599	False	NA	22	True	ATTAAA	-29	NA	3852797	3891458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.20	chr5	+	4367	11	ISM	ENSMUSG00000000600.16	ENSMUST00000199845.5	4293	16	0	16433	0	-220	5prime_fragment	FALSE	canonical	3	92	junction_1	41.4482810258761	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCATGGTTAGAAAAG	7985	False	NA	NA	False	AATAAA	-14	NA	3853183	3874851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086
ES.25381.21	chr5	+	2927	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	1	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7986	False	NA	8	True	AATAAA	-21	NA	3853184	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.22	chr5	+	2930	12	ISM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	1	16508	0	-220	5prime_fragment	FALSE	canonical	3	75	junction_1	43.9285671091656	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCATGGTTAGAAAAG	7986	False	NA	NA	False	AATAAA	-14	NA	3853184	3874851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633
ES.25381.23	chr5	+	4071	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	1	-1142	0	1142	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAACCTAGCTACATAGC	7986	False	NA	NA	False	ATTAAA	-23	NA	3853184	3892501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.24	chr5	+	3122	16	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_15	63.5226643717728	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7986	False	NA	10	True	AATAAA	-23	NA	3853184	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.25	chr5	+	2932	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	75.0533143838432	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTCCTTGCATCGG	7986	False	NA	10	True	ATTAAA	-17	NA	3853184	3891446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882143_3886777_3886895_3890873
ES.25381.26	chr5	+	4113	17	NNC	ENSMUSG00000000600.16	novel	5582	16	NA	NA	0	1138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.7316590574044	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCTAACCTAGCTACA	7990	False	NA	NA	False	ATTAAA	-19	NA	3853188	3892497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886899_3890873
ES.25381.27	chr5	+	3157	18	NIC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	1	86	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	81.2383821877592	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTTTCCTTGCATCG	7992	False	NA	9	True	ATTAAA	-16	NA	3853190	3891445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3863271_3863420_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.28	chr5	+	3400	18	NNC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_17	95.025146917607	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGTGTGTTACT	7995	False	NA	-67	True	ATTAAA	-12	NA	3853193	3891282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3854256_3854427_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3863271_3863420_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.29	chr5	+	3518	11	ISM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	11	17300	5	-1012	intron_retention	FALSE	canonical	3	75	junction_1	45.7695313500149	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATGGTTTATACAGA	7996	False	NA	NA	False	AATAAA	-15	NA	3853194	3874059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086
ES.25381.3	chr5	+	3529	1	Genic_Genomic	ENSMUSG00000000600.16	novel	NA	NA	NA	NA	-338	-3335	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATATAATTTGCTTTTG	7647	False	NA	NA	False	AATAAA	-12	NA	3852845	3856374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_3852800_3856400
ES.25381.30	chr5	+	3081	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	84.1344719778998	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7999	False	NA	10	True	AATAAA	-23	NA	3853197	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853286_3854256_3854427_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.31	chr5	+	3273	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_16	83.7565062771245	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	8003	False	NA	8	True	AATAAA	-21	NA	3853201	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3854256_3854427_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.33	chr5	+	2700	16	NNC	ENSMUSG00000000600.16	novel	5582	16	NA	NA	14	1385	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	72.4214210176949	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTTAATGTTACAT	8005	False	NA	NA	False	AATAAA	-18	NA	3853203	3882403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3854256_3854427_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019
ES.25381.34	chr5	+	5518	15	NIC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	17	85	intron_retention	FALSE	canonical	0	0	junction_14	76.6091325082948	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGGTTTCCTTGCATC	8008	False	NA	8	True	ATTAAA	-15	NA	3853206	3891444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3854427_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.35	chr5	+	3961	15	NIC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	75	1385	intron_retention	FALSE	canonical	3	9	junction_8	75.60207318181	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTTAATGTTACAT	8066	False	NA	NA	False	AATAAA	-18	NA	3853264	3882403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3863271_3863420_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019
ES.25381.36	chr5	+	5799	17	NIC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	126	87	intron_retention	FALSE	canonical	0	0	junction_16	80.4496882762761	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTCCTTGCATCGG	8332	False	NA	10	True	ATTAAA	-17	NA	3853530	3891446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3863271_3863420_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.37	chr5	+	3466	16	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	347	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	74.0196970782477	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	NA	False	NA	10	True	AATAAA	-23	NA	3855639	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873622_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.38	chr5	+	6283	12	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	776	-2	intron_retention	FALSE	canonical	0	0	junction_11	64.7790905965219	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	NA	False	NA	8	True	AATAAA	-21	NA	3856068	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3857459_3859635_3859729_3861255_3862576_3862741_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.39	chr5	+	10227	7	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-1353	0	intron_retention	FALSE	canonical	0	0	junction_6	103.710199862673	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	NA	False	NA	10	True	AATAAA	-23	NA	3864337	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3868684_3869309_3869418_3872086_3872244_3880605_3880773_3881495_3881584_3882019_3886895_3890873
ES.25381.4	chr5	+	4345	16	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_15	63.5016710191332	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7960	False	NA	10	True	AATAAA	-23	NA	3853158	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.40	chr5	+	3806	1	FSM	ENSMUSG00000000600.16	ENSMUST00000197611.2	4262	1	-417	873	-417	510	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGAAACCTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	3865273	3869079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3865300_3869100
ES.25381.41	chr5	+	4252	5	ISM	ENSMUSG00000000600.16	ENSMUST00000200577.5	3188	18	24228	2	-121	-2	3prime_fragment	FALSE	canonical	0	0	junction_4	95.7793688640722	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	NA	False	NA	8	True	AATAAA	-21	NA	3877416	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.42	chr5	+	2146	4	ISM	ENSMUSG00000000600.16	ENSMUST00000171023.8	5582	16	26003	2944	1870	0	3prime_fragment	FALSE	canonical	3	79	junction_3	64.7199093530474	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	NA	False	NA	10	True	AATAAA	-23	NA	3879407	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_3880773_3881495_3881584_3882019_3882227_3890873
ES.25381.43	chr5	+	2180	3	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	3109	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	115	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	NA	False	NA	8	True	AATAAA	-21	NA	3880646	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3882227_3886777_3886894_3890873
ES.25381.5	chr5	+	2973	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	71.3704026540414	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCTATTATTTAAACCA	7962	False	NA	6	True	AATAAA	-19	NA	3853160	3891355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3856440_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25381.6	chr5	+	5409	17	NNC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-16	-439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	84.0129965764226	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTGGTCCTGTCTATT	7969	False	NA	NA	False	NA	NA	NA	3853167	3893864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873780_3880603_3880773_3881495_3881584_3882019_3882143_3886777_3886895_3890873
ES.25381.7	chr5	+	2824	16	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	48.5859604778536	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTATTATTTAAACCATT	7972	False	NA	8	True	AATAAA	-21	NA	3853170	3891357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3890873
ES.25381.8	chr5	+	3149	17	NNC	ENSMUSG00000000600.16	novel	3188	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.8424654626357	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7972	False	NA	10	True	AATAAA	-23	NA	3853170	3891359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3853690_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ES.25382.1	chr5	-	6644	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-194	6	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGCCTTCTGGTGAGC	NA	False	NA	1	True	AATAAA	-24	NA	3853119	3739993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.10	chr5	-	5288	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30995	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	25.1701353648667	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCATTCTCTGCCTTCT	NA	False	NA	-6	True	AATAAA	-17	NA	3783127	3740000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.12	chr5	-	6304	19	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-181	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.540150263628	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCATTCTCTGCCTTC	NA	False	NA	-7	True	AATAAA	-16	NA	3853106	3740001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3822516_3822788_3852596
ES.25382.13	chr5	-	5167	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30999	-144	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATTTCTATCAATTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	3783131	3740143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.14	chr5	-	6517	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-217	-144	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATTTCTATCAATTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	3853142	3740143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.15	chr5	-	5942	19	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	74	-144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	24.5747160037846	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATTTCTATCAATTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	3852713	3740143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.16	chr5	-	6476	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-183	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	27.1953026740764	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTTCTATCAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	3853108	3740144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779792_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.17	chr5	-	7683	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-1602	-147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	29.7218872502648	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTCATTTCTATCAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	3847092	3740146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763261_3772516_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3845428
ES.25382.18	chr5	-	6457	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-181	150	-181	-150	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATTTTCATTTCTATC	NA	False	NA	NA	False	ATTAAA	-14	NA	3853106	3740149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.19	chr5	-	5133	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30995	-156	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	25.1701353648667	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTGCTCATTTTCATT	NA	False	NA	NA	False	ATTAAA	-8	NA	3783127	3740155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.2	chr5	-	6616	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-184	-6	-184	6	multi-exon	TRUE	canonical	3	27	junction_3	19.1839036868105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGCCTTCTGGTGAGC	NA	False	NA	1	True	AATAAA	-24	NA	3853109	3739993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.20	chr5	-	4997	16	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30985	-191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	28.9178145785604	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATTTGATGACAAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	3783117	3740190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853_3782924_3783032
ES.25382.21	chr5	-	6354	21	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-188	-415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.386901844189	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTTTGTCTCATTAAA	NA	False	NA	-1	True	ATTAAA	-21	NA	3853113	3740414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3775986_3776124_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.22	chr5	-	4942	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31045	-415	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTTTGTCTCATTAAA	NA	False	NA	-1	True	ATTAAA	-21	NA	3783177	3740414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.23	chr5	-	6196	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-186	416	-186	-416	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTTTGTCTCATTAA	NA	False	NA	-2	True	ATTAAA	-20	NA	3853111	3740415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.24	chr5	-	6221	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-194	-417	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTTTTGTCTCATTA	NA	False	NA	-3	True	ATTAAA	-19	NA	3853119	3740416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.25	chr5	-	6066	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-182	-417	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	26.9584681087424	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTTTTGTCTCATTA	NA	False	NA	-3	True	ATTAAA	-19	NA	3853107	3740416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819605_3822516_3822788_3852596
ES.25382.26	chr5	-	4882	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30997	-418	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.1687765838704	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCATTTTTGTCTCATT	NA	False	NA	-4	True	ATTAAA	-18	NA	3783129	3740417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3775986_3776124_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.27	chr5	-	6204	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-165	-418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.9517166432209	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCATTTTTGTCTCATT	NA	False	NA	-4	True	ATTAAA	-18	NA	3853090	3740417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819769_3820711_3820850_3822516_3822788_3852596
ES.25382.28	chr5	-	7557	19	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-184	-418	intron_retention	FALSE	canonical	3	68	junction_18	12.6233420864721	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCATTTTTGTCTCATT	NA	False	NA	-4	True	ATTAAA	-18	NA	3853109	3740417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.29	chr5	-	5809	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-1492	-419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	27.0196399278054	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCATTTTTGTCTCAT	NA	False	NA	-5	True	ATTAAA	-17	NA	3846982	3740418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3846851
ES.25382.3	chr5	-	6594	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-165	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	23.2023496756452	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTCTGCCTTCTGGTG	NA	False	NA	-2	True	AATAAA	-21	NA	3853090	3739996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819712_3822516_3822788_3852596
ES.25382.31	chr5	-	6070	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-171	-420	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	23.5782424706665	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCCATTTTTGTCTCA	NA	False	NA	-6	True	ATTAAA	-16	NA	3853096	3740419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819605_3822516_3822788_3852596
ES.25382.32	chr5	-	6186	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-145	-423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.4278523541527	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTTCCATTTTTGTC	NA	False	NA	-9	True	ATTAAA	-13	NA	3853070	3740422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743926_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.33	chr5	-	6058	19	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-183	-423	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	24.5747160037846	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTTCCATTTTTGTC	NA	False	NA	-9	True	ATTAAA	-13	NA	3853108	3740422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.34	chr5	-	6015	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-184	-613	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGTAAACAAGTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	3853109	3740612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.35	chr5	-	5916	19	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-137	-613	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.5944889942623	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGTAAACAAGTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	3853062	3740612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.36	chr5	-	5995	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-183	-614	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	23.2023496756452	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTGTAAACAAGTTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	3853108	3740613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819712_3822516_3822788_3852596
ES.25382.37	chr5	-	5336	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	69	-901	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGACCAAGCTGTAAC	NA	False	NA	NA	False	ATTAAA	-41	NA	3852718	3740900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.38	chr5	-	4345	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30979	-946	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGATTTTTTATTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	3783111	3740945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.39	chr5	-	4335	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30987	-946	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	25.1701353648667	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGATTTTTTATTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	3783119	3740945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.4	chr5	-	5329	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31014	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTCTGCCTTCTGGTG	NA	False	NA	-2	True	AATAAA	-21	NA	3783146	3739996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.40	chr5	-	3823	14	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31016	-1359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.9899773834195	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACTTACATTATTGAA	NA	False	NA	NA	False	ATTAAA	-25	NA	3783148	3741358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.41	chr5	-	5239	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-181	1368	-181	-1368	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGACTCTTGTACTTAC	NA	False	NA	NA	False	ATTAAA	-16	NA	3853106	3741367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.42	chr5	-	3960	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31016	-1368	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGACTCTTGTACTTAC	NA	False	NA	NA	False	ATTAAA	-16	NA	3783148	3741367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.43	chr5	-	5235	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-161	-1370	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATGACTCTTGTACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	3853086	3741369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.44	chr5	-	4697	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-172	1546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.7519499126648	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCGGTGCTGTATTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	3853097	3741922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777484_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.45	chr5	-	6732	1	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-10686	-5536	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-21	NA	3762818	3756086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_3756100_3762800
ES.25382.46	chr5	-	3134	7	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-30983	-8707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.6724722631905	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATAGTTGCTAATGTCT	NA	False	NA	NA	False	AATAAA	-33	NA	3783115	3759257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3761509_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.47	chr5	-	2383	6	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-31003	-11077	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	30.3934203405935	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGACTCTTTTTCATTT	NA	False	NA	NA	False	AATAAA	-14	NA	3783135	3761627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.48	chr5	-	3722	11	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-211	21629	-211	-11078	5prime_fragment	FALSE	canonical	3	68	junction_5	16.4392822227736	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGACTCTTTTTCATT	NA	False	NA	NA	False	AATAAA	-13	NA	3853136	3761628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.49	chr5	-	2314	11	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-184	23010	-184	-12459	5prime_fragment	FALSE	canonical	3	68	junction_5	16.4392822227736	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAACTGAGTTCTT	NA	False	NA	NA	False	ATTAAA	-11	NA	3853109	3763009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.5	chr5	-	6485	20	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-183	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	26.9584681087424	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTCTCTGCCTTCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	3853108	3739998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819605_3822516_3822788_3852596
ES.25382.50	chr5	-	2481	10	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-183	32149	-183	11531	5prime_fragment	FALSE	canonical	3	68	junction_4	17.1269767715535	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGGAATTTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	3853108	3772148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.51	chr5	-	2087	10	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-1479	11531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.7474435907354	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGGAATTTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	3846969	3772148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3846851
ES.25382.52	chr5	-	1165	5	NNC	ENSMUSG00000040351.12	novel	2572	19	NA	NA	-30999	11531	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	33.9742549587184	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTGGAATTTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	3783131	3772148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
ES.25382.53	chr5	-	3808	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	-285	-1954	-147	1954	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTGTACACCATGGAA	NA	False	NA	NA	False	NA	NA	NA	3853072	3781725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.54	chr5	-	3104	6	NNC	ENSMUSG00000040351.12	novel	1569	6	NA	NA	-186	1229	intron_retention	FALSE	canonical	1	3	junction_4	38.2570254985931	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTGTATTGGTTTTTG	NA	False	NA	NA	False	AATGAA	-27	NA	3853111	3782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819712_3822516_3822788_3852596
ES.25382.55	chr5	-	1889	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	-320	0	-182	0	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTAGTTTATAGTATA	NA	False	NA	NA	False	AATAAA	-16	NA	3853107	3783679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25382.56	chr5	-	2938	1	Intergenic	novelGene_21179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACCCAACTTTAAAAGT	4941	False	NA	NA	False	AATAAA	-25	NA	3840092	3837154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3837200_3840100
ES.25382.57	chr5	-	2246	1	Intergenic	novelGene_21180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTTGCCATGGTCAT	NA	False	NA	NA	False	NA	NA	NA	3849066	3846820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_3846800_3849100
ES.25382.58	chr5	-	2651	1	Genic_Genomic	ENSMUSG00000040351.12	novel	NA	NA	NA	NA	-653	-67248	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCGTTTTGAGTAATTT	NA	False	NA	NA	False	AATAAA	-38	NA	3853578	3850927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_3850900_3853600
ES.25382.6	chr5	-	5117	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31018	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	29.4186009462152	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTCTCTGCCTTCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	3783150	3739998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783049
ES.25382.8	chr5	-	6739	21	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-188	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.421250823172	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTCTCTGCCTTCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	3853113	3739998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3802910_3803017_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ES.25383.1	chr5	-	4226	4	Antisense	novelGene_ENSMUSG00000000600.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACTTAATCATTTGG	NA	False	NA	NA	False	NA	NA	NA	3864134	3856038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_3857457_3859633_3859727_3861253_3862575_3862740
ES.25383.2	chr5	-	839	4	Antisense	novelGene_ENSMUSG00000000600.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3861333	3856060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_3856569_3857298_3857457_3859633_3859727_3861253
ES.25384.1	chr5	+	2287	1	Genic_Genomic	ENSMUSG00000040367.3_ENSMUSG00000000600.16	novel	NA	NA	NA	NA	-1	1894	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3895171	3897458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_3895200_3897500
ES.25385.1	chr5	+	1210	1	FSM	ENSMUSG00000104699.2	ENSMUST00000199852.2	793	1	-329	-88	-329	88	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATACA	NA	False	NA	NA	False	ATTAAA	-18	NA	3925032	3926242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3925000_3926200
ES.25386.1	chr5	-	1909	3	NNC	ENSMUSG00000040429.7	novel	2413	2	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	3943902	3940581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3941898_3942808_3943374_3943874
ES.25386.2	chr5	-	1402	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	-27	1	-27	-1	multi-exon	FALSE	canonical	3	112	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	3943960	3940581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3941898_3943874
ES.25386.3	chr5	-	3336	1	FSM	ENSMUSG00000040429.7	ENSMUST00000196417.2	1790	1	-21	-1525	-10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	3943917	3940581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_3940600_3943900
ES.25386.4	chr5	-	1934	3	NNC	ENSMUSG00000040429.7	novel	2413	2	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	3943918	3940581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3941898_3942808_3943383_3943874
ES.25386.5	chr5	-	1865	3	NNC	ENSMUSG00000040429.7	novel	1376	2	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTATTTTGTATGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	3943902	3940582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3941898_3942840_3943363_3943874
ES.25386.7	chr5	-	1449	3	NNC	ENSMUSG00000040429.7	novel	1376	2	NA	NA	3	-26	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATTTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	3943904	3940609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_3941898_3942840_3942972_3943874
ES.25387.1	chr5	+	11317	46	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	-211	-1568	intron_retention	TRUE	canonical	0	0	junction_33	18.6096218309604	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGCTCTTTTGTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	3977842	4129742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.10	chr5	+	10879	46	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	13	-1568	intron_retention	FALSE	canonical	0	0	junction_16	17.3313959031181	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGCTCTTTTGTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	3978286	4129742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.11	chr5	+	11455	48	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	13	-1568	intron_retention	FALSE	canonical	3	6	junction_18	16.8417661863368	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGCTCTTTTGTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	3978286	4129742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.12	chr5	+	11832	49	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	13	-1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9526090259069	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTGAACCTTCTTGAT	NA	False	NA	23	True	AATAAA	-25	NA	3978286	4130205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3978343_3978425_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084750_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.13	chr5	+	1915	8	FSM	ENSMUSG00000040407.19	ENSMUST00000143365.8	2010	8	110	-15	14	15	multi-exon	FALSE	canonical	3	19	junction_3	6.1145527311522	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGCTAGACAGAATGG	NA	False	NA	NA	False	AATAAA	-28	NA	3978287	4011004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111
ES.25387.15	chr5	+	9081	34	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	16	-9210	intron_retention	FALSE	canonical	3	19	junction_3	10.9861754684387	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTTTGTTGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	3978289	4101715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209
ES.25387.16	chr5	+	11854	48	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	-2611	-1108	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	16.1541633678437	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTAGTTGAACCTTCTT	3644	False	NA	20	True	AATAAA	-22	NA	3998678	4130202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.17	chr5	+	3590	17	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	33383	51113	6942	-2707	internal_fragment	FALSE	canonical	3	19	junction_11	7.47260622206202	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTAGTAGCCATTTT	6331	False	NA	NA	False	AATATA	-11	NA	4011656	4080197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839
ES.25387.18	chr5	+	8691	41	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	40304	1106	-3394	-1106	3prime_fragment	FALSE	canonical	3	19	junction_10	15.6159974065059	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTGAACCTTCTTGA	NA	False	NA	22	True	AATAAA	-24	NA	4018577	4130204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.19	chr5	+	8087	37	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	526	-1106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	19.8017956537055	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTGAACCTTCTTGA	2791	False	NA	22	True	AATAAA	-24	NA	4026141	4130204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4081110_4081150_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127963_4129658
ES.25387.2	chr5	+	12258	49	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	33	-1106	intron_retention	FALSE	canonical	3	19	junction_3	16.1909048328238	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTGAACCTTCTTGA	NA	False	NA	22	True	AATAAA	-24	NA	3978086	4130204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.20	chr5	+	7584	36	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	47875	1568	533	-1568	3prime_fragment	FALSE	canonical	3	19	junction_5	15.7653715076908	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGCTCTTTTGTGCTT	2798	False	NA	NA	False	ATTAAA	-19	NA	4026148	4129742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.21	chr5	+	6289	30	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	-14926	-1568	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	19.2782368532816	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGGCTCTTTTGTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	4058488	4129742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4081110_4081150_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.22	chr5	+	5968	26	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	101649	1313	-3836	-1313	3prime_fragment	FALSE	canonical	3	33	junction_1	13.6137577472203	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGCTGGACGAGTACC	NA	False	NA	NA	False	ATTAAA	-15	NA	4079922	4129997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.23	chr5	+	5112	23	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	4872	-1572	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.3827239208673	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCAATGGCTCTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	4088630	4129738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096926_4100150_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.24	chr5	+	3674	10	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	118435	15332	-12541	602	intron_retention	FALSE	canonical	3	48	junction_7	6.62952617341169	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTATTTTGTAAGAGT	NA	False	NA	NA	False	AATACA	-22	NA	4096708	4115978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070
ES.25387.26	chr5	+	1373	9	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	136905	1566	-117	-1566	3prime_fragment	FALSE	canonical	3	47	junction_1	14.2390308658981	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTCTTTTGTGCTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	4115178	4129744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.27	chr5	+	1430	1	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	11300	-1108	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTAGTTGAACCTTCTT	NA	False	NA	20	True	AATAAA	-22	NA	4128772	4130202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_4128800_4130200
ES.25387.3	chr5	+	11924	48	NNC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	4	-1106	intron_retention	FALSE	non_canonical	0	0	junction_12	18.0627897352393	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTGAACCTTCTTGA	NA	False	NA	22	True	AATAAA	-24	NA	3978277	4130204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022840_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.4	chr5	+	11711	48	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	5	-1107	intron_retention	FALSE	canonical	3	5	junction_16	17.2035453829661	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGTTGAACCTTCTTG	NA	False	NA	21	True	AATAAA	-23	NA	3978278	4130203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.5	chr5	+	11428	48	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	5	-1564	intron_retention	FALSE	canonical	3	7	junction_29	17.181401084668	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCTTTTGTGCTTTTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	3978278	4129746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.7	chr5	+	7622	35	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	11	-1107	intron_retention	FALSE	canonical	0	0	junction_4	18.4837205095574	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGTTGAACCTTCTTG	NA	False	NA	21	True	AATAAA	-23	NA	3978284	4130203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25387.9	chr5	+	11476	46	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	13	-971	intron_retention	FALSE	canonical	0	0	junction_16	17.3313959031181	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACACTAAGGTGGCACTG	NA	False	NA	NA	False	ATTAAA	-24	NA	3978286	4130339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ES.25388.1	chr5	-	2238	1	Antisense	novelGene_ENSMUSG00000040407.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGTATTTTGACCATC	NA	False	NA	NA	False	AAAAAG	-8	NA	4120468	4118230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_4118200_4120500
ES.25388.10	chr5	-	3744	11	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	42	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.58776800174	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTTTTGTCTTTAT	NA	False	NA	-3	True	ATTAAA	-41	NA	4154704	4131125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4131193_4131356_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.11	chr5	-	4519	9	NIC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	648	junction_6	53.6573329098642	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAACAGATTTTCTTTG	NA	False	NA	-27	True	ATTAAA	-17	NA	4154433	4131149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4151355_4152927_4153027_4154133
ES.25388.12	chr5	-	3820	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	-30	141	-30	-141	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTTTGTGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	4154776	4131285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.13	chr5	-	3377	10	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-33	-157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	230.647772722236	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTGCCAGTGTAGA	NA	False	NA	NA	False	ATTAAA	-31	NA	4154454	4131301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4141990_4142441_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.14	chr5	-	3333	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	326	272	1	-272	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTTGTCTCTTACTGA	NA	False	NA	NA	False	NA	NA	NA	4154420	4131416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.15	chr5	-	3481	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	-30	480	-30	-480	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTTTGTATTCATGAAT	NA	False	NA	0	True	ATTAAA	-19	NA	4154776	4131624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.16	chr5	-	2191	6	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	10888	-483	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.345437370844	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTTGTATTCATG	NA	False	NA	-3	True	ATTAAA	-16	NA	4142493	4131627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4133142_4133193_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387
ES.25388.17	chr5	-	2967	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	-5	969	-5	-969	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTACTGGCTGGTCT	NA	False	NA	-2	True	NA	NA	NA	4154751	4132113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.2	chr5	-	4809	1	Antisense	novelGene_ENSMUSG00000106535.2_AS_novelGene_ENSMUSG00000040407.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATATATATTGGC	NA	False	NA	NA	False	NA	NA	NA	4124662	4119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_4119900_4124700
ES.25388.20	chr5	-	5049	5	NIC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	4132	-973	intron_retention	FALSE	canonical	3	703	junction_4	32.5221078652661	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTACTGGCTG	NA	False	NA	-6	True	NA	NA	NA	4149249	4132117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123
ES.25388.22	chr5	-	2620	10	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-35	-973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	233.831267644845	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTACTGGCTG	NA	False	NA	-6	True	NA	NA	NA	4154456	4132117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4133304_4136459_4136629_4137777_4137850_4141868_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.23	chr5	-	2078	12	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-34	-973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.454298497816	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTACTGGCTG	NA	False	NA	-6	True	NA	NA	NA	4154455	4132117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4132264_4132740_4133304_4136459_4136629_4137777_4137874_4141844_4141900_4142011_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.24	chr5	-	2618	10	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-24	-973	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	235.05055931033	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGTACTGGCTG	NA	False	NA	-6	True	NA	NA	NA	4154445	4132117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149260_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.25	chr5	-	2602	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	70	1259	70	876	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTTTGAGATTAGTGA	NA	False	NA	NA	False	TTTAAA	-22	NA	4154676	4132403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.26	chr5	-	2544	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	7	1380	7	755	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCACAGTTTTGTGA	NA	False	NA	0	True	AATAAA	-34	NA	4154739	4132524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.27	chr5	-	2129	10	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-48	743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.002652992642	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGGTCCCAAATGGTC	NA	False	NA	-12	True	AATAAA	-22	NA	4154469	4132536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4133304_4136592_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.28	chr5	-	2980	1	NIC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	17863	741	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTACTGGTCCCAAATGG	NA	False	NA	-14	True	AATAAA	-20	NA	4135518	4132538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_4132500_4135500
ES.25388.3	chr5	-	11206	11	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-33	7731	intron_retention	FALSE	canonical	0	0	junction_1	223.58776800174	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTATTTGGAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	4154454	4123413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4131193_4131356_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.30	chr5	-	1505	3	FSM	ENSMUSG00000001467.6	ENSMUST00000199909.2	693	3	-70	-742	-70	742	multi-exon	FALSE	canonical	3	676	junction_2	72	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTCAGTATTTTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	4154491	4150306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4151355_4152927_4153027_4154133
ES.25388.4	chr5	-	6435	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	66	-2570	66	2570	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTGTGTAGGCGATA	NA	False	NA	NA	False	AATAAA	-16	NA	4154680	4128574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.5	chr5	-	4453	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	260	-782	-65	782	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCCACCTTAGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	4154486	4130362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.6	chr5	-	2928	3	NNC	ENSMUSG00000001467.6	novel	528	6	NA	NA	16764	777	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	353	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACCAGTGCCACCTT	NA	False	NA	NA	False	AATAAA	-14	NA	4136617	4130367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4131165_4131330_4133304_4136459
ES.25388.7	chr5	-	3958	11	NNC	ENSMUSG00000001467.6	novel	3931	10	NA	NA	-40	476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.58776800174	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCTTTGTGATTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	4154461	4130668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4131193_4131356_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.8	chr5	-	4142	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	263	-474	-62	474	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCACAGCTTTGTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	4154483	4130670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25388.9	chr5	-	3981	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	-30	-20	-30	20	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTTTTGTCTTTATT	NA	False	NA	-2	True	ATTAAA	-42	NA	4154776	4131124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ES.25389.1	chr5	+	3160	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	5	-1797	5	1797	multi-exon	FALSE	canonical	3	119	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACTTTATTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	4242371	4249448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_4242419_4246335
ES.25389.2	chr5	+	1356	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	12	0	12	0	multi-exon	FALSE	canonical	3	119	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	4242378	4247651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_4242419_4246335
ES.25389.3	chr5	+	1561	3	NNC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	4242379	4247651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_4242419_4245994_4246201_4246335
ES.25389.4	chr5	+	4328	2	Genic_Genomic	ENSMUSG00000053178.6	novel	1368	2	NA	NA	855	-12	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTAAGATTACATTTAT	NA	False	NA	NA	False	AATAAA	-10	NA	4243221	4247639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_4244447_4244536
ES.25389.5	chr5	+	3697	1	NIC	ENSMUSG00000053178.6	novel	1368	2	NA	NA	1560	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATTTTAAAGTAT	NA	False	NA	NA	False	ATTAAA	-8	NA	4243926	4247623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_4243900_4247600
ES.2539.1	chr10	+	174	1	Intergenic	novelGene_1927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	30610220	30610394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30610200_30610400
ES.25390.1	chr5	+	177	1	Intergenic	novelGene_21181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTTATATAATTCT	NA	False	NA	NA	False	NA	NA	NA	4465710	4465887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_4465700_4465900
ES.25391.1	chr5	+	170	1	Intergenic	novelGene_21182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4758474	4758644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_4758500_4758600
ES.25392.1	chr5	-	4216	1	FSM	ENSMUSG00000044674.7	ENSMUST00000054294.7	4197	1	-24	5	-24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATTTTTCTGTGTGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	4808059	4803843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4803800_4808100
ES.25393.1	chr5	-	5406	15	FSM	ENSMUSG00000028926.16	ENSMUST00000030763.13	4851	15	-551	-4	-497	4	multi-exon	FALSE	canonical	0	0	junction_5	2.34846888896766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTGGTATGTAGTCGT	NA	False	NA	-1	True	AATAAA	-22	NA	5430748	4853386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5423457_5423490_5430034
ES.25393.2	chr5	-	4972	15	NNC	ENSMUSG00000028926.16	novel	3446	11	NA	NA	-394	1540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.50305935256218	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTAGAGTAAATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	5430645	4933953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_4936968_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5423457_5423490_5430034
ES.25394.1	chr5	-	1152	10	Fusion	ENSMUSG00000046798.15_ENSMUSG00000079666.9	novel	710	7	NA	NA	-10	0	multi-exon	TRUE	canonical	0	0	junction_1	30.0053493173188	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTGCAGAGTATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	5564883	5487826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_5487918_5500607_5500655_5502008_5502068_5505896_5505991_5507284_5507379_5516624_5516672_5557995_5558455_5561070_5561123_5563161_5563252_5564764
ES.25394.10	chr5	-	3515	3	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	5564843	5555108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5558455_5563161_5563252_5564764
ES.25394.11	chr5	-	4129	1	NIC	ENSMUSG00000046798.15	novel	3752	5	NA	NA	5212	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	296	False	NA	-3	True	ATTAAA	-17	NA	5559237	5555108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5555100_5559200
ES.25394.12	chr5	-	3624	4	ISM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	422	94	82	0	3prime_fragment	FALSE	canonical	2	3	junction_3	30.169889330626	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	5564367	5555108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564231
ES.25394.13	chr5	-	3458	4	NNC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.3371209675842	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	5564830	5555108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5558359_5561070_5561123_5563161_5563252_5564764
ES.25394.14	chr5	-	3670	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115446.8	3519	4	-151	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	31.5841028929991	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564976	5555110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5558455_5561070_5561123_5563161_5563224_5564764
ES.25394.15	chr5	-	3672	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115445.8	3477	4	-83	-112	12	0	multi-exon	FALSE	canonical	3	7	junction_3	28.2842712474619	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564813	5555110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564627
ES.25394.16	chr5	-	654	2	NNC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	7292	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGTCTCTGTCCTT	2376	False	NA	-7	True	ATTAAA	-13	NA	5557157	5555112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5555681_5557071
ES.25394.17	chr5	-	2265	5	NNC	ENSMUSG00000046798.15	novel	359	5	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7893864631805	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGTCTCTGTCCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	5564945	5555112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5555677_5557076_5558455_5561070_5561123_5563161_5563252_5564764
ES.25394.2	chr5	-	157	1	Intergenic	novelGene_21183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5528608	5528451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_5528500_5528600
ES.25394.3	chr5	-	3664	1	Intergenic	novelGene_21184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5034	False	NA	NA	False	NA	NA	NA	5554499	5550835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_5550800_5554500
ES.25394.4	chr5	-	8546	1	NIC	ENSMUSG00000046798.15	novel	349	4	NA	NA	3327	2438	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	5561122	5552576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5552600_5561100
ES.25394.5	chr5	-	3727	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115445.8	3477	4	22	-272	22	64	multi-exon	FALSE	canonical	3	7	junction_3	28.2842712474619	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTCTTTACTTGTGGC	NA	False	NA	NA	False	NA	NA	NA	5564708	5554950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564627
ES.25394.6	chr5	-	3700	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	30	-133	-18	39	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGACACCAAGTCGGGTTC	NA	False	NA	NA	False	NA	NA	NA	5564843	5554975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
ES.25394.7	chr5	-	3843	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCTGCGTGCCCTGG	NA	False	NA	88	True	AATAAA	-13	NA	5564956	5555017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
ES.25394.8	chr5	-	4598	3	ISM	ENSMUSG00000046798.15	ENSMUST00000115446.8	3519	4	467	-5	91	3	3prime_fragment	FALSE	canonical	3	67	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCCTTTTCTCAG	NA	False	NA	0	True	ATTAAA	-20	NA	5564358	5555105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_5558455_5561070_5561123_5563161
ES.25394.9	chr5	-	3714	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	-114	-3	-29	3	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCCTTTTCTCAG	NA	False	NA	0	True	ATTAAA	-20	NA	5564987	5555105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
ES.25395.1	chr5	-	3723	1	Genic_Genomic	ENSMUSG00000040464.16	novel	NA	NA	NA	NA	3251	981	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	5590195	5586472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5586500_5590200
ES.25395.11	chr5	-	3625	9	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	193	junction_5	40.7729996443725	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609511	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5606157_5607212_5607407_5609432
ES.25395.13	chr5	-	3064	11	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	122.1327556391	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609501	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5604823_5604900_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.14	chr5	-	3009	11	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	110.515564514687	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609501	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5604823_5604900_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.17	chr5	-	2965	11	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	113.134477503544	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609500	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597573_5597607_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.19	chr5	-	7132	6	ISM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	6839	2	3055	-2	3prime_fragment	FALSE	canonical	3	193	junction_5	29.763064358362	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5602699	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926
ES.25395.20	chr5	-	3678	7	NNC	ENSMUSG00000040464.16	novel	941	8	NA	NA	-2083	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	93.3357142553458	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5599351	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598539_5598644
ES.25395.21	chr5	-	3321	1	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	2669	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTAGTTTCTGTTCCTA	NA	False	NA	NA	False	GATAAA	-16	NA	5590777	5587456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5587500_5590800
ES.25395.22	chr5	-	1580	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	37	1355	12	424	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGACTCTGTTTTAAAAC	NA	False	NA	NA	False	AATATA	-14	NA	5609501	5588808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.23	chr5	-	1574	10	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	4	417	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	88.1031942639208	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGATTTGACTCTGTT	NA	False	NA	NA	False	AATATA	-7	NA	5609478	5588815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605407_5606064_5606157_5607212_5607407_5609432
ES.25395.25	chr5	-	1608	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	1	417	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGATTTGACTCTGTT	NA	False	NA	NA	False	AATATA	-7	NA	5609481	5588815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.26	chr5	-	2252	9	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	14	416	intron_retention	FALSE	canonical	3	193	junction_5	40.7729996443725	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAGATTTGACTCTGT	NA	False	NA	NA	False	AATATA	-6	NA	5609499	5588816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5606157_5607212_5607407_5609432
ES.25395.3	chr5	-	2975	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	-1	-2	-1	2	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTGTTCCTAATGTT	NA	False	NA	NA	False	GATAAA	-21	NA	5609539	5587451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25395.4	chr5	-	5436	5	ISM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	10060	-2	-2210	2	intron_retention	FALSE	canonical	3	224	junction_3	20.7047699818182	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTGTTCCTAATGTT	NA	False	NA	NA	False	GATAAA	-21	NA	5599478	5587451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352
ES.25395.5	chr5	-	2960	10	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	88.1031942639208	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTGTTCCTAATGTT	NA	False	NA	NA	False	GATAAA	-21	NA	5609500	5587451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605407_5606064_5606157_5607212_5607407_5609432
ES.25395.6	chr5	-	4310	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	89.6157779317961	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609499	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5608053
ES.25395.7	chr5	-	2738	9	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	89.931571208336	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609500	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5609432
ES.25395.8	chr5	-	3011	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.095344960192	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609501	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606180_5607212_5607407_5609432
ES.25395.9	chr5	-	2998	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTTTCTGTTCCTAA	NA	False	NA	NA	False	GATAAA	-17	NA	5609511	5587455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ES.25396.1	chr5	-	4916	23	NNC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3.29819635157668	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTAGCTGGTTTTATTA	NA	False	NA	NA	False	AATAAA	-18	NA	5714202	5629281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643855_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.10	chr5	-	3553	23	NNC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	6	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.61385076550927	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTTGCTAAATGTATAT	NA	False	NA	-4	True	AATAAA	-13	NA	5714202	5631158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671464_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694561_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.12	chr5	-	4422	14	NNC	ENSMUSG00000040473.16	novel	2188	16	NA	NA	0	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.9374789341173	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAACCATGAACATTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	5714208	5642591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5644858_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671464_5672044_5676008_5676159_5690128_5690228_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.13	chr5	-	2429	4	NNC	ENSMUSG00000040473.16	novel	2920	5	NA	NA	5	-553	intron_retention	FALSE	canonical	0	0	junction_1	6.37704215656966	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCTAGAAGTACATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	5714203	5697382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5699390_5699789_5699856_5707787_5707848_5713907
ES.25396.2	chr5	-	5918	22	NNC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	5	-6	intron_retention	FALSE	canonical	1	1	junction_18	3.01545527599763	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCACTGTCTTTGAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	5714203	5631043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694561_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.3	chr5	-	3246	23	NNC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	2.95419578350399	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCACTGTCTTTGAA	NA	False	NA	NA	False	ATTAAA	-29	NA	5714238	5631046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694561_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.4	chr5	-	3243	24	NIC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	7	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	3.81569735615911	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCACTGTCTTTGAA	NA	False	NA	NA	False	ATTAAA	-29	NA	5714220	5631046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671464_5671540_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.5	chr5	-	3183	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	0	1773	0	-13	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAACACCACTGTCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	5714239	5631050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.6	chr5	-	12155	20	NIC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	-2	43	intron_retention	FALSE	canonical	2	4	junction_16	2.67335265246322	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAAGTTAGGATAA	NA	False	NA	70	True	AATAAA	-20	NA	5714241	5631084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.7	chr5	-	2479	19	NIC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	13444	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	3.21262939884466	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAAATGTATATTTAT	NA	False	NA	0	True	AATAAA	-17	NA	5699848	5631154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789
ES.25396.8	chr5	-	3497	23	NIC	ENSMUSG00000040473.16	novel	4956	23	NA	NA	6	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	3.33278232360425	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAAATGTATATTTAT	NA	False	NA	0	True	AATAAA	-17	NA	5714202	5631154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671464_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25396.9	chr5	-	3071	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	4	1881	-3	12	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTTGCTAAATGTATAT	NA	False	NA	-4	True	AATAAA	-13	NA	5714235	5631158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ES.25397.1	chr5	-	2431	6	NIC	ENSMUSG00000015653.14	novel	10408	6	NA	NA	-12	-1228	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.6879509058149	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTATTTGGAGACTGGC	4806	False	NA	NA	False	NA	NA	NA	5744545	5717181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_5718106_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.10	chr5	-	2842	5	NNC	ENSMUSG00000015653.14	novel	3285	5	NA	NA	400	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.7372826531895	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCACCATTGTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	5732663	5721722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5723697_5725840_5726006_5726464_5726510_5727316_5727845_5732533
ES.25397.11	chr5	-	3713	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	-290	234	-31	0	multi-exon	FALSE	canonical	3	20	junction_3	7.4565407529229	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTCCCACCATTGTCT	4994	False	NA	NA	False	AATAAA	-24	NA	5744357	5721724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ES.25397.12	chr5	-	4008	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115425.9	4550	6	-249	791	25	1	multi-exon	FALSE	canonical	1	2	junction_5	13.251415018782	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTCCCACCATT	5050	False	NA	NA	False	AATAAA	-20	NA	5744301	5721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743602
ES.25397.13	chr5	-	3241	7	NNC	ENSMUSG00000015653.14	novel	3657	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.7725834852973	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTCCCACCATT	5275	False	NA	NA	False	AATAAA	-20	NA	5744076	5721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5722443_5722629_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ES.25397.14	chr5	-	3505	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	3	6900	3	1	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTTCCCACCATT	4776	False	NA	NA	False	AATAAA	-20	NA	5744575	5721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.15	chr5	-	3502	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	-183	338	76	-99	multi-exon	FALSE	canonical	3	20	junction_3	7.4565407529229	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAATTGTGTGTATTCT	5101	False	NA	NA	False	AGTAAA	-13	NA	5744250	5721828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ES.25397.16	chr5	-	3383	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	24	7001	-21	-100	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTAATTGTGTGTATTC	4797	False	NA	NA	False	AGTAAA	-12	NA	5744554	5721829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.17	chr5	-	2342	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	-8	1323	-8	691	multi-exon	FALSE	canonical	3	20	junction_3	7.4565407529229	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTGCACTGGAGA	5276	False	NA	NA	False	ATTAAA	-17	NA	5744075	5722813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ES.25397.2	chr5	-	2850	7	NNC	ENSMUSG00000015653.14	novel	4550	6	NA	NA	0	-1249	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	14.4077525427574	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	5291	False	NA	NA	False	NA	NA	NA	5744060	5717202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5718106_5723548_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743602
ES.25397.3	chr5	-	1888	7	NNC	ENSMUSG00000015653.14	novel	10408	6	NA	NA	-21	-1928	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	13.2507861402006	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATTTTAAGAATGG	4797	False	NA	NA	False	AATAAA	-12	NA	5744554	5717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5718106_5723548_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.4	chr5	-	6691	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	20	3697	20	2412	multi-exon	FALSE	canonical	3	8	junction_5	11.3384302264467	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTTCTATCTTACT	4793	False	NA	NA	False	ATTAAA	-24	NA	5744558	5718525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.5	chr5	-	6659	7	NNC	ENSMUSG00000015653.14	novel	10408	6	NA	NA	9	2411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.9761701954911	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTTTTCTATCTTAC	4782	False	NA	NA	False	ATTAAA	-23	NA	5744569	5718526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5720025_5720066_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ES.25397.6	chr5	-	2158	2	NNC	ENSMUSG00000015653.14	novel	10089	4	NA	NA	6554	2407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTCTGCTTTTCTATC	NA	False	NA	NA	False	ATTAAA	-19	NA	5720731	5718530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5720025_5720067
ES.25397.7	chr5	-	6466	6	NNC	ENSMUSG00000015653.14	novel	3657	6	NA	NA	-18	2406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.6908728720999	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTCTGCTTTTCTAT	5266	False	NA	NA	False	ATTAAA	-18	NA	5744085	5718531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5720025_5720066_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5743957
ES.25397.8	chr5	-	6595	7	NNC	ENSMUSG00000015653.14	novel	3657	6	NA	NA	-21	2406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.7725834852973	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTCTGCTTTTCTAT	5263	False	NA	NA	False	ATTAAA	-18	NA	5744088	5718531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_5720025_5720066_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ES.25397.9	chr5	-	4087	5	FSM	ENSMUSG00000015653.14	ENSMUST00000115424.9	3285	5	-10	-792	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	12.5797456254091	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAAGTGCTGAAAGGC	5281	False	NA	NA	False	AATAAA	-18	NA	5744070	5720937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5743957
ES.25398.1	chr5	-	264	1	Intergenic	novelGene_21185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATTTCCTCAGCTACT	NA	False	NA	NA	False	NA	NA	NA	5751796	5751532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_5751500_5751800
ES.25398.2	chr5	-	178	2	Intergenic	novelGene_21186	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATTAGAAA	NA	False	NA	NA	False	NA	NA	NA	5752743	5751617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_5751650_5752597
ES.25398.3	chr5	-	178	1	Intergenic	novelGene_21187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGAGATTTAGG	NA	False	NA	NA	False	NA	NA	NA	5752744	5752566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_5752600_5752700
ES.25399.1	chr5	+	1058	1	Intergenic	novelGene_21188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATGAAGAAACCAGCTC	NA	False	NA	NA	False	NA	NA	NA	5797868	5798926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_5797900_5798900
ES.254.1	chr1	-	206	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAAAGAATATT	NA	False	NA	NA	False	NA	NA	NA	35771161	35770955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_35771000_35771200
ES.2540.1	chr10	-	5124	16	FSM	ENSMUSG00000039697.17	ENSMUST00000068567.5	5105	16	-17	-2	-17	0	multi-exon	FALSE	canonical	1	1	junction_15	2.09337579574768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCCTAAAGACTCAT	NA	False	NA	2	True	AATAAA	-24	NA	30679120	30521577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567784_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
ES.2540.2	chr10	-	3553	8	NNC	ENSMUSG00000039697.17	novel	2875	14	NA	NA	31262	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.44114392723358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCTTTCCTAAAG	NA	False	NA	-4	True	AATAAA	-18	NA	30567439	30521583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565899_30566752
ES.2540.3	chr10	-	3781	17	NNC	ENSMUSG00000039697.17	novel	5105	16	NA	NA	190	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.59130155520349	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGAATTTCTTTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	30678913	30521587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_30522481_30523573_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567751_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
ES.25400.1	chr5	-	1261	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	-32	1	-32	-1	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATCACAACTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	5799358	5786317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
ES.25401.1	chr5	-	2148	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	-83	-124	-83	124	mono-exon	FALSE	NA	NA	NA	NA	NA	5209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTACACGAGAAGCATC	NA	False	NA	44	True	NA	NA	NA	5833638	5831490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_5831500_5833600
ES.25401.10	chr5	-	1717	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	115	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833633	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832056_5832472
ES.25401.11	chr5	-	1462	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-79	114	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGTATTGGTTACAC	NA	False	NA	34	True	TTTAAA	-38	NA	5833634	5831500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5831852_5832523
ES.25401.12	chr5	-	2056	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-75	113	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTATTGGTTACA	NA	False	NA	33	True	TTTAAA	-37	NA	5833630	5831501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5831789_5831861
ES.25401.13	chr5	-	1973	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-74	113	multi-exon	FALSE	canonical	1	339	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATGTATTGGTTACA	NA	False	NA	33	True	TTTAAA	-37	NA	5833629	5831501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833326_5833480
ES.25401.14	chr5	-	2093	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	112	multi-exon	FALSE	canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGTATTGGTTAC	NA	False	NA	32	True	TTTAAA	-36	NA	5833633	5831502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833561_5833598
ES.25401.16	chr5	-	856	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	85	multi-exon	FALSE	canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5833633	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832082_5833329
ES.25401.17	chr5	-	770	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	1204	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5832351	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832070_5832121
ES.25401.18	chr5	-	1638	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	85	multi-exon	FALSE	canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5833633	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832082_5832547
ES.25401.19	chr5	-	1809	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5833633	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832558_5832852
ES.25401.2	chr5	-	1502	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	120	multi-exon	FALSE	canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGGTTACACGAGAAG	NA	False	NA	40	True	TTTAAA	-44	NA	5833633	5831494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832082_5832718
ES.25401.20	chr5	-	848	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-79	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5833634	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832193_5833449
ES.25401.21	chr5	-	1723	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	5	True	AATAAA	-19	NA	5833633	5831529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832789_5833169
ES.25401.22	chr5	-	2020	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-79	84	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	4	True	AATAAA	-18	NA	5833634	5831530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5831956_5832039
ES.25401.23	chr5	-	1955	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-80	83	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	3	True	AATAAA	-17	NA	5833635	5831531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833420_5833568
ES.25401.24	chr5	-	2026	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-75	82	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	2	True	AATAAA	-16	NA	5833630	5831532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833466_5833537
ES.25401.26	chr5	-	1820	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-81	81	multi-exon	FALSE	canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CACCAAAAAAAAAAAAAAAA	NA	False	NA	1	True	AATAAA	-15	NA	5833636	5831533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832436_5832718
ES.25401.27	chr5	-	1994	3	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-80	80	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCACCAAAAAAAAAAAAAAA	NA	False	NA	0	True	AATAAA	-14	NA	5833635	5831534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833410_5833462_5833537_5833590
ES.25401.3	chr5	-	2012	3	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833633	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832531_5832588_5832847_5832910
ES.25401.4	chr5	-	1921	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-75	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833630	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833351_5833560
ES.25401.5	chr5	-	1496	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-80	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833635	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832875_5833514
ES.25401.6	chr5	-	2066	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-81	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833636	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833490_5833560
ES.25401.7	chr5	-	2041	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-75	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833630	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833464_5833553
ES.25401.8	chr5	-	2084	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-79	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833634	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5833094_5833144
ES.25401.9	chr5	-	1963	2	Genic_Genomic	ENSMUSG00000100801.2	novel	1941	1	NA	NA	-78	115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTATTGGTTACACG	NA	False	NA	35	True	TTTAAA	-39	NA	5833633	5831499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_5832389_5832559
ES.25402.1	chr5	-	177	1	Intergenic	novelGene_21189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6679080	6678903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_6678900_6679100
ES.25403.1	chr5	-	177	1	Intergenic	novelGene_21190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGTAAAAA	9839	False	NA	NA	False	NA	NA	NA	8057827	8057650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_8057600_8057800
ES.25404.1	chr5	+	3323	3	FSM	ENSMUSG00000003161.16	ENSMUST00000144265.6	531	3	-42	-2750	-7	0	multi-exon	FALSE	canonical	3	504	junction_2	21	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8106519	8112471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537_8107622_8109352
ES.25404.12	chr5	+	817	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	37	1397	2	28	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAGTCTGTTATACC	NA	False	NA	17	True	AATAAA	-23	NA	8106563	8117754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ES.25404.13	chr5	+	1452	8	NNC	ENSMUSG00000003161.16	novel	2251	8	NA	NA	2	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	170.099490694987	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCTCCTGAGCCATTA	NA	False	NA	40	True	TATAAA	-21	NA	8106563	8117777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8113001_8113220_8113408_8113636_8113751_8114557_8114617_8117532
ES.25404.2	chr5	+	962	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	5	1284	5	141	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGTGATATATGA	NA	False	NA	12	True	TATAAA	-29	NA	8106531	8117867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ES.25404.3	chr5	+	5059	2	FSM	ENSMUSG00000003161.16	ENSMUST00000145119.2	400	2	-20	-4639	11	23	multi-exon	FALSE	canonical	3	546	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTCTAAAAATCTCATC	NA	False	NA	NA	False	NA	NA	NA	8106537	8112494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537
ES.25404.5	chr5	+	2331	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	19	-99	-12	99	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTTCATGAGTATTTA	NA	False	NA	83	True	NA	NA	NA	8106545	8119250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ES.25404.6	chr5	+	1591	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	19	641	-12	-641	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAGTAATAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	8106545	8118510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ES.25404.7	chr5	+	3356	6	NIC	ENSMUSG00000003161.16	novel	2251	8	NA	NA	-12	88	intron_retention	FALSE	canonical	3	437	junction_3	38.4967531098403	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATATTCAGTCACTTC	NA	False	NA	72	True	NA	NA	NA	8106545	8119239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8114617_8117532
ES.25404.9	chr5	+	1179	4	NNC	ENSMUSG00000003161.16	novel	531	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	248.080632053371	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8106557	8112471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8106640_8107537_8107622_8109352_8109984_8112089
ES.25405.1	chr5	-	2591	1	Antisense	novelGene_ENSMUSG00000003161.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGGCATCAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	8110100	8107509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_8107500_8110100
ES.25406.1	chr5	+	4306	1	Antisense	novelGene_ENSMUSG00000040537.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTCCAGGTATGAC	NA	False	NA	NA	False	NA	NA	NA	8124218	8128524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_8124200_8128500
ES.25407.1	chr5	+	1559	2	Antisense	novelGene_ENSMUSG00000106265.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGACCCCAGATTGCT	NA	False	NA	NA	False	NA	NA	NA	8378982	8417685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_8380057_8417200
ES.25408.1	chr5	-	9176	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-44	3	combination_of_known_junctions	TRUE	canonical	3	20	junction_18	5.47955383257448	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCTCTTTCATGTTTT	6017	False	NA	0	True	AATAAA	-22	NA	8418204	8122348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.10	chr5	-	3311	30	NIC	ENSMUSG00000040537.18	novel	9056	31	NA	NA	-90	339	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	8.29924856561511	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTAGCAGGTTTT	5971	False	NA	-4	True	AATAAA	-14	NA	8418250	8128346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8137981_8138069_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.11	chr5	-	8713	31	NNC	ENSMUSG00000040537.18	novel	9056	31	NA	NA	7	339	intron_retention	FALSE	canonical	0	0	junction_2	11.0556169735871	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTAGCAGGTTTT	6094	False	NA	-4	True	AATAAA	-14	NA	8418127	8128346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8128707_8132145_8132270_8136593_8142188_8142339_8142407_8142730_8142832_8157001_8157020_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.14	chr5	-	3431	31	NIC	ENSMUSG00000040537.18	novel	9077	31	NA	NA	-86	337	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	10.3238666313655	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAAGTTTAGCAGGTT	5975	False	NA	-6	True	AATAAA	-12	NA	8418246	8128348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8144985_8145181_8157001_8157020_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.15	chr5	-	3089	28	NNC	ENSMUSG00000040537.18	novel	2773	29	NA	NA	8	545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.79381063568815	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTTTTGGTGTTGTTTC	6095	False	NA	NA	False	NA	NA	NA	8418126	8141714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8142188_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.16	chr5	-	2743	27	ISM	ENSMUSG00000040537.18	ENSMUST00000115388.9	9161	30	-172	19988	-93	-17	5prime_fragment	FALSE	canonical	3	20	junction_16	5.25123259692258	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTACCTTTAATGG	5968	False	NA	NA	False	AAAAAG	-45	NA	8418253	8142339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.17	chr5	-	2046	6	NNC	ENSMUSG00000040537.18	novel	705	2	NA	NA	-91	5180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5692003648229	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGTGATCTATGTAT	5970	False	NA	NA	False	TATAAA	-12	NA	8418251	8268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8269923_8282609_8282677_8328124_8328214_8379979_8380057_8417200_8417362_8417875
ES.25408.18	chr5	-	1799	5	NNC	ENSMUSG00000040537.18	novel	705	2	NA	NA	3	5142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6656503687164	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGGAAAAAAAT	6090	False	NA	NA	False	NA	NA	NA	8418131	8268684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8269923_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.19	chr5	-	974	7	NNC	ENSMUSG00000040537.18	novel	1620	5	NA	NA	-2	-371	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0157324903656	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTTGGTCCTCCCTC	6138	False	NA	NA	False	AATAAA	-10	NA	8418083	8274197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8274500_8274812_8274883_8282609_8282677_8328124_8328214_8379979_8380057_8417200_8417362_8417875
ES.25408.20	chr5	-	3549	3	NNC	ENSMUSG00000040537.18	novel	705	2	NA	NA	3	20512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTTTTTGATTGAAC	6147	False	NA	NA	False	AATAAA	-13	NA	8418074	8396429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8399619_8417200_8417362_8417875
ES.25408.3	chr5	-	9043	30	FSM	ENSMUSG00000040537.18	ENSMUST00000050166.14	8969	30	-74	0	21	0	multi-exon	FALSE	canonical	2	4	junction_4	8.66814524415925	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCTCTCTTTCATGT	6165	False	NA	-3	True	AATAAA	-19	NA	8418056	8122351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8157001_8157020_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.4	chr5	-	8300	22	NIC	ENSMUSG00000040537.18	novel	8969	30	NA	NA	-37801	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	7.3654214479944	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACAGCTCTCTTTCATG	NA	False	NA	-4	True	AATAAA	-18	NA	8208896	8122352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826
ES.25408.5	chr5	-	5899	28	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-9	1513	intron_retention	FALSE	canonical	3	20	junction_18	5.46368482361967	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGAATCAGTTGCTCTG	6052	False	NA	NA	False	ATTAAA	-20	NA	8418169	8126325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.6	chr5	-	5249	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-98	1509	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	5.47955383257448	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGAGAATCAGTTGC	5963	False	NA	NA	False	ATTAAA	-16	NA	8418258	8126329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.7	chr5	-	3595	28	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	6.89207413418169	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCCAGTCTGGAAGAGG	6017	False	NA	NA	False	TTTAAA	-2	NA	8418204	8127838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.8	chr5	-	3236	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	-96	345	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	5.47955383257448	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGCAGGTTTTCCTGAG	5965	False	NA	2	True	AATAAA	-20	NA	8418256	8128340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25408.9	chr5	-	3289	30	FSM	ENSMUSG00000040537.18	ENSMUST00000115388.9	9161	30	-123	5995	-44	339	multi-exon	TRUE	canonical	1	2	junction_2	8.67774224460105	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTAGCAGGTTTT	6017	False	NA	-4	True	AATAAA	-14	NA	8418204	8128346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8128707_8132145_8132270_8140141_8140253_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ES.25409.1	chr5	+	5545	10	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-23	40	intron_retention	FALSE	canonical	3	29	junction_1	8.54328123855159	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCAGGCCTTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	8472826	8504837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.10	chr5	+	2658	11	NIC	ENSMUSG00000054099.12	novel	2784	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	15.2712147519443	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCCTGTGTTGGTTTAC	NA	False	NA	NA	False	AATAAA	-37	NA	8472850	8504754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8502745_8502827_8503191
ES.25409.11	chr5	+	4366	10	NIC	ENSMUSG00000054099.12	novel	2602	11	NA	NA	2	-2	intron_retention	FALSE	canonical	2	9	junction_1	13.2086765348565	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTATTTGTGATTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	8472851	8504795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.12	chr5	+	2784	12	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	16.2389186628557	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGTATTTGTGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	8472864	8504793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8474796_8474888_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.13	chr5	+	2777	13	NIC	ENSMUSG00000054099.12	novel	2749	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_5	15.4943986294689	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTGTTTTACATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	8472867	8504736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480430_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.14	chr5	+	394	1	NIC	ENSMUSG00000054099.12	novel	2784	12	NA	NA	-4	-5372	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCAGGGTTTTTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	8472868	8473262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8472900_8473300
ES.25409.15	chr5	+	1451	13	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	28	-1286	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCATAATTTGAATTATT	NA	False	NA	NA	False	AATGAA	-23	NA	8472926	8503450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.16	chr5	+	7635	7	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	1230	0	intron_retention	FALSE	canonical	3	36	junction_5	7.60847480700888	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCCTGTGTTGGTTTAC	NA	False	NA	NA	False	AATAAA	-37	NA	8476061	8504754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8478689_8480411_8480519_8490720_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.17	chr5	+	3465	3	ISM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	24956	1	4090	-1	3prime_fragment	FALSE	canonical	3	36	junction_1	12	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTTGTTTTACATTA	NA	False	NA	NA	False	AATAAA	-18	NA	8497854	8504735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8499695_8502745_8502827_8503191
ES.25409.2	chr5	+	2571	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	-11	224	-11	-163	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTTTTATGTGTATTCT	NA	False	NA	NA	False	TATAAA	-16	NA	8472838	8504573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.3	chr5	+	2763	12	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	17.9051680059784	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTTGGTTTACAT	NA	False	NA	NA	False	AATAAA	-39	NA	8472838	8504756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8502745_8502827_8503191
ES.25409.4	chr5	+	2718	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	-60	-56	-11	3	multi-exon	FALSE	canonical	2	9	junction_1	12.7342059037853	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	ATTAAA	-13	NA	8472838	8504792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.5	chr5	+	2881	13	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	ATTAAA	-13	NA	8472838	8504792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.6	chr5	+	6566	9	NIC	ENSMUSG00000054099.12	novel	4467	12	NA	NA	-11	4	intron_retention	FALSE	canonical	3	29	junction_1	9.05538513813742	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTTGGTTTACATTA	NA	False	NA	NA	False	AATAAA	-41	NA	8472838	8504758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8477195_8477268_8477407_8478689_8480411_8480519_8490720_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.7	chr5	+	5377	9	NIC	ENSMUSG00000054099.12	novel	2602	11	NA	NA	-8	2	intron_retention	FALSE	canonical	2	9	junction_1	14.0083680348569	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTTGGTTTACAT	NA	False	NA	NA	False	AATAAA	-39	NA	8472841	8504756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.8	chr5	+	2834	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	-8	-42	-8	42	multi-exon	FALSE	canonical	3	29	junction_1	8.37055050175789	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGCCTTCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	8472841	8504839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.25409.9	chr5	+	2760	12	FSM	ENSMUSG00000054099.12	ENSMUST00000196727.5	2749	12	-8	-3	0	3	multi-exon	FALSE	canonical	2	9	junction_4	12.5210566448736	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTATTTGTGATT	NA	False	NA	NA	False	ATTAAA	-13	NA	8472849	8504792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480430_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ES.2541.1	chr10	-	181	1	Intergenic	novelGene_1928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30705788	30705607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_30705600_30705800
ES.25410.1	chr5	-	6802	1	Genic_Genomic	ENSMUSG00000002297.17	novel	NA	NA	NA	NA	2943	6412	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAACTGAAA	NA	False	NA	NA	False	AATACA	-28	NA	8447362	8440560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_8440600_8447400
ES.25410.10	chr5	-	3554	11	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-4	1257	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	149.02714517832	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTAGTTTTTAATTT	NA	False	NA	-2	True	AATAAA	-15	NA	8472685	8445715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8449813_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.13	chr5	-	2473	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	-101	29	-65	9	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATGAATATCATTTG	NA	False	NA	NA	False	AATAAA	-31	NA	8472781	8447001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.15	chr5	-	2485	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-77	-6	-77	6	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAAATGAATATCAT	NA	False	NA	NA	False	AATAAA	-28	NA	8472793	8447004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.17	chr5	-	5689	11	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	396	junction_2	49.163095915534	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472736	8447010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.18	chr5	-	2261	11	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-40	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	143.002832139787	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472756	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8471220_8471394_8472466
ES.25410.19	chr5	-	4385	10	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	396	junction_3	48.9340700317942	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472685	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.2	chr5	-	8449	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	2	-6049	2	6011	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCAATTGTTCTTAGG	NA	False	NA	NA	False	NA	NA	NA	8472714	8440961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.20	chr5	-	2417	12	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	141.972643156908	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472734	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455837_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.21	chr5	-	2513	13	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	179.355075354882	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472744	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8456158_8456243_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.23	chr5	-	2589	13	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	174.672709819123	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472761	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8461852_8461996_8462120_8462301_8471220_8471394_8472466
ES.25410.24	chr5	-	5982	9	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-41	-1	intron_retention	FALSE	canonical	3	396	junction_2	51.8700298823897	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCCTGAGAATAAAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	8472757	8447011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8449813_8453079_8453192_8453611_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.27	chr5	-	7139	11	NNC	ENSMUSG00000002297.17	novel	2509	10	NA	NA	8	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	148.967781751626	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCCTGAGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8472708	8447013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8451090_8451133_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.30	chr5	-	1734	9	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-3922	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	152.361361161549	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCCTGAGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8476638	8447013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458544_8476629
ES.25410.31	chr5	-	2431	12	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.216921962761	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCCTGAGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8472780	8447013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448131_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.32	chr5	-	2421	12	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	142.087971818649	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCCTGAGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8472721	8447013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458328_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.33	chr5	-	2940	12	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	141.674635977435	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCCTGAGAATAAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8472750	8447013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448670_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.34	chr5	-	5639	11	NNC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	143.678425659526	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTCCTGAGAATAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	8472682	8447014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8448163_8449687_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460069_8462120_8462301_8471220_8471394_8472466
ES.25410.36	chr5	-	4694	1	NIC	ENSMUSG00000002297.17	novel	2401	12	NA	NA	-1406	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATTCCTGAGAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	8451711	8447017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8447000_8451700
ES.25410.37	chr5	-	2339	11	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-22	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	148.777552070196	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATATTCCTGAGAATA	NA	False	NA	NA	False	AATAAA	-14	NA	8472738	8447018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.38	chr5	-	8042	10	NIC	ENSMUSG00000002297.17	novel	2402	12	NA	NA	-10	-10	intron_retention	FALSE	canonical	3	396	junction_2	51.8218696385947	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATATTCCTGAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	8472704	8447020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8448163_8449687_8453192_8453611_8453741_8454870_8454917_8455801_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.4	chr5	-	6346	6	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	16878	-4745	-598	4707	3prime_fragment	FALSE	canonical	3	396	junction_3	38.484282505979	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGAACAGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	8455838	8442265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801
ES.25410.5	chr5	-	6212	1	Genic_Genomic	ENSMUSG00000002297.17	novel	NA	NA	NA	NA	1735	4614	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCTTGTATGTATACT	NA	False	NA	NA	False	TTTAAA	-26	NA	8448570	8442358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_8442400_8448600
ES.25410.6	chr5	-	4809	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-43	-2364	-43	2326	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAACTTTTTAAAGTCCA	NA	False	NA	NA	False	NA	NA	NA	8472759	8444646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.7	chr5	-	4412	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-37	-1973	-37	1935	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTTCTGAGTACT	NA	False	NA	NA	False	TATAAA	-10	NA	8472753	8445037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.8	chr5	-	4226	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	33	-1857	-2	1819	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACATTTTATTTTTTG	NA	False	NA	NA	False	AGTAAA	-13	NA	8472683	8445153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25410.9	chr5	-	3798	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	-99	-1297	-99	1259	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGTTTTTAATTTGA	NA	False	NA	0	True	AATAAA	-17	NA	8472815	8445713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ES.25411.1	chr5	-	6040	1	Antisense	novelGene_ENSMUSG00000054099.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	AAAACA	-37	NA	8494571	8488531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_8488500_8494600
ES.25412.1	chr5	+	5766	2	Intergenic	novelGene_21191	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	8509974	8518758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_8510551_8513568
ES.25413.1	chr5	+	2339	1	Intergenic	novelGene_21192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACTATATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	8548979	8551318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_8549000_8551300
ES.25414.1	chr5	-	3763	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	-86	0	-86	0	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCTTTTTCCTTGA	NA	False	NA	1	True	ATTAAA	-19	NA	8673038	8540333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.10	chr5	-	3554	9	NNC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.2365552524465	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTACTGGTCTTTTTCC	NA	False	NA	-3	True	ATTAAA	-15	NA	8672899	8540337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8609411_8609502_8619494_8619581_8629024_8629174_8653869_8653986_8672487
ES.25414.11	chr5	-	3422	9	NIC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	165	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	17.6351920885484	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTACTGGTCTTTTTCC	NA	False	NA	-3	True	ATTAAA	-15	NA	8672787	8540337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8629024_8629159_8653869_8653986_8672487
ES.25414.13	chr5	-	2597	8	ISM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	78	27216	78	-27216	5prime_fragment	FALSE	canonical	3	50	junction_3	4.76380914300945	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTTAAATATTCTG	NA	False	NA	NA	False	TATAAA	-17	NA	8672874	8569482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.14	chr5	-	1081	7	ISM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	153	36246	153	-36246	5prime_fragment	FALSE	canonical	3	50	junction_2	4.98887651569859	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCATTGCTACTTTCTT	NA	False	NA	NA	False	ACTAAA	-10	NA	8672799	8578512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.15	chr5	-	1566	1	Intergenic	novelGene_21193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTCACCTGAGGAATA	NA	False	NA	NA	False	NA	NA	NA	8648661	8647095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_8647100_8648700
ES.25414.2	chr5	-	3675	9	NIC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	-120	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.0398863632785	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCTTTTTCCTTGA	NA	False	NA	1	True	ATTAAA	-19	NA	8673072	8540333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8542590_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.3	chr5	-	3675	10	NIC	ENSMUSG00000040570.15	novel	1891	11	NA	NA	66	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	21.0138108612784	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	8672886	8540335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.4	chr5	-	4703	2	ISM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	125720	2	125720	-2	3prime_fragment	FALSE	canonical	3	35	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTACTGGTCTTTTTCCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	8547232	8540335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_8542590_8544783
ES.25414.5	chr5	-	3935	11	FSM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	-114	-1930	-114	-3	multi-exon	FALSE	canonical	3	15	junction_2	15.6920361967464	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTACTGGTCTTTTTCCT	NA	False	NA	-2	True	ATTAAA	-16	NA	8673066	8540336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.6	chr5	-	3609	10	NIC	ENSMUSG00000040570.15	novel	1891	11	NA	NA	90	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	19.436506316151	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTACTGGTCTTTTTCCT	NA	False	NA	-2	True	ATTAAA	-16	NA	8672862	8540336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_8542590_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.7	chr5	-	3801	12	NNC	ENSMUSG00000040570.15	novel	1891	11	NA	NA	68	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	21.7563517845986	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTACTGGTCTTTTTCCT	NA	False	NA	-2	True	ATTAAA	-16	NA	8672884	8540336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8611821_8611870_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25414.9	chr5	-	3764	11	NNC	ENSMUSG00000040570.15	novel	1891	11	NA	NA	50	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.6815416922694	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTACTGGTCTTTTTCC	NA	False	NA	-3	True	ATTAAA	-15	NA	8672902	8540337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_8542590_8544783_8544906_8562266_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ES.25415.1	chr5	+	4974	28	FSM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	-34	57	-34	-52	multi-exon	FALSE	canonical	0	0	junction_9	64.0965278576142	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8710042	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8710223_8710661_8710733_8714545_8714595_8724682_8724843_8733383_8733436_8735220_8735413_8736126_8736299_8744065_8744191_8748485_8748658_8751608_8751723_8751866_8751978_8752152_8752279_8752368_8752573_8752792_8752964_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.10	chr5	+	3233	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8469	-52	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	61.2864219073367	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8761349	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8761508_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.11	chr5	+	3498	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8257	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	59.5979728459529	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGATAATGGTTATGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	8761561	8798570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8761933_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.12	chr5	+	2510	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13284	52	-185	-52	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8783102	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.13	chr5	+	1909	6	ISM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	13298	639	-171	-639	3prime_fragment	FALSE	canonical	3	112	junction_1	56.9582303095874	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTCATATTTTTGAGT	NA	False	NA	NA	False	TATAAA	-18	NA	8783116	8797931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.14	chr5	+	1785	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	-139	-638	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCATATTTTTGAGTT	NA	False	NA	NA	False	TATAAA	-19	NA	8783148	8797932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.15	chr5	+	2366	7	NNC	ENSMUSG00000040584.9	novel	494	2	NA	NA	-134	-52	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	78.9460082728837	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8783153	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8783506_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.16	chr5	+	3066	3	NIC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	5561	-64	intron_retention	FALSE	canonical	3	131	junction_1	69.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAATATCCATA	NA	False	NA	NA	False	AATAAA	-9	NA	8788848	8798506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8790616_8796508_8796656_8797354
ES.25415.2	chr5	+	3351	20	ISM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	38445	643	-21297	-638	3prime_fragment	FALSE	canonical	0	0	junction_1	65.1752378925388	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCATATTTTTGAGTT	NA	False	NA	NA	False	TATAAA	-19	NA	8748521	8797932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8748658_8751608_8751723_8751866_8751978_8752152_8752279_8752368_8752573_8752792_8752964_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.3	chr5	+	4960	14	ISM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	50640	642	-9102	-637	3prime_fragment	FALSE	canonical	3	48	junction_7	59.5291187263121	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATATTTTTGAGTTA	NA	False	NA	NA	False	TATAAA	-20	NA	8760716	8797933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.4	chr5	+	4556	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-9102	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	59.4603280536266	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGATAATGGTTATGTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	8760716	8798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8762145_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.5	chr5	+	4079	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-9102	-52	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	62.7505589860459	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8760716	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8761721_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.6	chr5	+	4725	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8707	-52	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63.3926861164695	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8761111	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8761591_8762015_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.7	chr5	+	3499	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8684	-638	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	59.4603280536266	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCATATTTTTGAGTT	NA	False	NA	NA	False	TATAAA	-19	NA	8761134	8797932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8762145_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.8	chr5	+	3478	14	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8682	-637	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.2827155541425	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATATTTTTGAGTTA	NA	False	NA	NA	False	TATAAA	-20	NA	8761136	8797933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8762292_8763170_8763349_8764886_8765064_8765741_8765814_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25415.9	chr5	+	5374	14	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8678	-52	intron_retention	FALSE	non_canonical	0	0	junction_1	65.3152573311679	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8761140	8798518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8761591_8762015_8763349_8764886_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ES.25416.1	chr5	-	176	1	Intergenic	novelGene_21194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8805323	8805147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_8805100_8805300
ES.25417.1	chr5	+	4502	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-193	-3	-154	3	multi-exon	TRUE	canonical	3	66	junction_6	57.377196351684	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTATGTATATGAATT	NA	False	NA	13	True	ATTAAA	-20	NA	8847992	8916318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.10	chr5	+	3406	5	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	52777	1	-113	intron_retention	FALSE	canonical	3	110	junction_4	17.1955662890176	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTATTTGTAACACAAT	NA	False	NA	1	True	AATAAA	-19	NA	8848147	8863538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557
ES.25417.11	chr5	+	4197	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_26	54.3420026723148	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848147	8916315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8915749
ES.25417.13	chr5	+	4308	28	NNC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	61.1326785735318	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	9	True	ATTAAA	-16	NA	8848147	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901491_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.14	chr5	+	3581	22	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.5822837684927	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCATCTGTTATGTAT	NA	False	NA	6	True	ATTAAA	-13	NA	8848147	8916311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.15	chr5	+	4458	29	NNC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.82522617762	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848147	8916315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8879073_8879188_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.16	chr5	+	5090	21	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-38	26258	1	-9764	5prime_fragment	FALSE	canonical	3	66	junction_6	24.5731560854523	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTTTCCTTACTGTCA	NA	False	NA	NA	False	AATAAA	-13	NA	8848147	8890057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590
ES.25417.18	chr5	+	6048	26	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	0	intron_retention	FALSE	canonical	3	66	junction_11	57.7878880043215	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848147	8916315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.19	chr5	+	502	4	ISM	ENSMUSG00000028970.10	ENSMUST00000196580.5	690	6	-4	7403	2	-7403	5prime_fragment	FALSE	canonical	3	144	junction_1	3.74165738677394	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATGTGCAGTGTTGTG	NA	False	NA	NA	False	AATGAA	-18	NA	8848148	8856248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007
ES.25417.2	chr5	+	4210	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	-61	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	62.0952694269628	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCATCTGTTATGTAT	NA	False	NA	6	True	ATTAAA	-13	NA	8848085	8916311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.21	chr5	+	4440	28	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.8855530275474	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848358	8916315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8848597_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.22	chr5	+	4284	27	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	460	8	460	-8	3prime_fragment	FALSE	canonical	3	66	junction_5	58.3477257533806	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGAGCCATCTGTTAT	NA	False	NA	2	True	ATTAAA	-9	NA	8848645	8916307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.23	chr5	+	11470	21	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	8564	0	intron_retention	FALSE	canonical	3	66	junction_6	63.848472965295	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8856749	8916315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.24	chr5	+	4154	11	ISM	ENSMUSG00000028970.10	ENSMUST00000199955.5	3181	22	16577	18350	-10566	3712	internal_fragment	FALSE	canonical	3	66	junction_6	12.6051576745394	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	8864723	8881471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822
ES.25417.25	chr5	+	3436	21	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-4584	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.1094060168368	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	9	True	ATTAAA	-16	NA	8870705	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8870771_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.26	chr5	+	9610	2	NNC	ENSMUSG00000028970.10	novel	3181	22	NA	NA	-3564	3662	intron_retention	FALSE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	8871725	8881421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8874603_8874688
ES.25417.28	chr5	+	1444	7	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-321	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.0627805117549	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	5063	False	NA	9	True	ATTAAA	-16	NA	8899011	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8899041_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.29	chr5	+	1975	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50833	-66	-314	66	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGATTTTAAGAGCC	5070	False	NA	76	True	NA	NA	NA	8899018	8916381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.3	chr5	+	1511	4	ISM	ENSMUSG00000028970.10	ENSMUST00000196580.5	690	6	-64	6454	-58	-6454	5prime_fragment	FALSE	canonical	3	144	junction_1	3.74165738677394	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCGTTTGTTCCTAT	NA	False	NA	NA	False	AATAAA	-35	NA	8848088	8857197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007
ES.25417.30	chr5	+	1682	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	50967	93	-180	-93	3prime_fragment	FALSE	canonical	3	175	junction_1	34.1912269449343	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTACCCTACTTTCTT	5204	False	NA	21	True	AATAAA	-25	NA	8899152	8916222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.31	chr5	+	1582	5	NNC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	-139	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.012403992904	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATCTGTTATGTATAT	5245	False	NA	8	True	ATTAAA	-15	NA	8899193	8916313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8899650_8901456_8901614_8903428_8903627_8911423_8911631_8915749
ES.25417.32	chr5	+	1619	7	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-120	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	90.3119593409422	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCATCTGTTATGTATA	5264	False	NA	7	True	ATTAAA	-14	NA	8899212	8916312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8899419_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.33	chr5	+	1438	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-280	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	7158	False	NA	9	True	ATTAAA	-16	NA	8901106	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.34	chr5	+	1366	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-259	-100	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	99.6481811173691	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTAATTTCTACCCTA	7179	False	NA	14	True	AATAAA	-18	NA	8901127	8916215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8901319_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.4	chr5	+	4283	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-78	101	-39	-101	multi-exon	FALSE	canonical	3	66	junction_6	57.377196351684	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTAATTTCTACCCT	NA	False	NA	13	True	AATAAA	-17	NA	8848107	8916214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.5	chr5	+	1403	6	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	-73	52776	-34	-112	5prime_fragment	FALSE	canonical	3	110	junction_4	19.0850727009357	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATTTGTAACACAATT	NA	False	NA	2	True	AATAAA	-20	NA	8848112	8863539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654
ES.25417.6	chr5	+	4191	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	61.858076252282	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	9	True	ATTAAA	-16	NA	8848127	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.7	chr5	+	4497	28	NNC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	66.0299221359828	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	9	True	ATTAAA	-16	NA	8848146	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856310_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875536_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.8	chr5	+	4286	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	62.5254149509853	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	False	NA	9	True	ATTAAA	-16	NA	8848146	8916314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ES.25417.9	chr5	+	4404	22	NNC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	1	-9765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	32.0153024636147	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCTTTTCCTTACTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	8848147	8890056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8888479
ES.25418.1	chr5	+	4083	28	FSM	ENSMUSG00000042476.13	ENSMUST00000003717.13	4079	28	-5	1	-5	-1	multi-exon	FALSE	canonical	0	0	junction_4	1.68508343201146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCGTGTAAAAGAAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	8943711	9009225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_8943908_8944087_8944165_8946572_8946628_8949567_8949719_8955974_8956033_8957207_8957400_8959101_8959274_8960618_8960744_8964955_8965128_8968658_8968773_8970019_8970131_8970334_8970461_8977770_8977975_8978406_8978578_8980741_8980904_8984155_8984327_8985175_8985323_8986784_8986890_8988578_8988657_8989833_8989918_8990910_8991115_8996018_8996120_8997296_8997438_8999948_9000106_9000659_9000858_9005388_9005596_9008310_9008458_9008968
ES.25418.2	chr5	+	2804	17	NIC	ENSMUSG00000042476.13	novel	4079	28	NA	NA	1	-3835	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1.67588595972399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGTGTATCTTCAGCA	NA	False	NA	NA	False	NA	NA	NA	8943721	8987252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_8943908_8944087_8944165_8946572_8946628_8949567_8949719_8957207_8957400_8959101_8959274_8960618_8960744_8964955_8965128_8968658_8968773_8970019_8970131_8970334_8970461_8977770_8977975_8978406_8978578_8980741_8980904_8984155_8984327_8985175_8985323_8986784
ES.25418.3	chr5	+	6108	4	NNC	ENSMUSG00000042476.13	novel	4079	28	NA	NA	-10891	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCGTGTAAAAGAAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	8997660	9009224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_8997719_8999948_9005596_9008310_9008458_9008968
ES.25419.1	chr5	+	504	1	FSM	ENSMUSG00000078183.4	ENSMUST00000120584.2	195	1	-25	-284	-25	284	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGAAAGGCGAGTGA	NA	False	NA	NA	False	NA	NA	NA	9021922	9022426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9021900_9022400
ES.2542.1	chr10	-	2579	5	FSM	ENSMUSG00000019789.10	ENSMUST00000019924.9	2550	5	-30	1	-30	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGGAGGAGTTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	30718827	30708355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_30710424_30713470_30713553_30716386_30716471_30716599_30716679_30718561
ES.25420.1	chr5	+	4023	1	Antisense	novelGene_ENSMUSG00000003623.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTAAAATAGAGAGGACC	NA	False	NA	NA	False	NA	NA	NA	9041743	9045766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_9041700_9045800
ES.25420.2	chr5	+	136	1	Intergenic	novelGene_21195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	9042883	9043019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_9042900_9043000
ES.25421.10	chr5	-	3249	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	153	-406	-129	406	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCGCTCCCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	9047171	9015626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.13	chr5	-	4759	18	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-124	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	51.8564027405518	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGTTGAAAACAATGATTG	NA	False	NA	-12	True	AATAAA	-29	NA	9047166	9016033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9031766_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.14	chr5	-	3090	17	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	133	-1	intron_retention	FALSE	canonical	3	171	junction_8	19.5572077505967	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGTTGAAAACAATGATTG	NA	False	NA	-12	True	AATAAA	-29	NA	9047191	9016033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.17	chr5	-	2898	19	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-129	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	65.8299342769958	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTTTCACCTTACGGTT	NA	False	NA	-26	True	AATAAA	-15	NA	9047171	9016047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9045669_9045740_9046451_9046548_9047103
ES.25421.18	chr5	-	2735	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	126	135	126	-135	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCAGAACTTTACAATT	NA	False	NA	43	True	TTTAAA	-20	NA	9047198	9016167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.20	chr5	-	2808	18	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	24	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	52.090950538723	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTAGAGCTAGCAGCT	NA	False	NA	-2	True	ATTAAA	-19	NA	9047018	9016212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9046805
ES.25421.21	chr5	-	2863	17	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-104	-183	intron_retention	FALSE	canonical	3	171	junction_8	19.5572077505967	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGTTAGAGCTAGCA	NA	False	NA	-5	True	ATTAAA	-16	NA	9047146	9016215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.24	chr5	-	2553	18	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-104	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	51.6102642617012	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTAATTGTTAGAGCTA	NA	False	NA	-8	True	ATTAAA	-13	NA	9047146	9016218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037814_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.25	chr5	-	2590	18	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-117	-237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	52.0421043275286	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATGTTGCAATTCATT	NA	False	NA	-59	True	NA	NA	NA	9047159	9016269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037771_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.27	chr5	-	2369	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	158	469	-124	-469	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTTTAATACTTTCTA	NA	False	NA	NA	False	NA	NA	NA	9047166	9016501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.28	chr5	-	2256	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	152	588	-130	-588	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATCCTACTTAACAAGC	NA	False	NA	NA	False	AATAGA	-45	NA	9047172	9016620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.29	chr5	-	2125	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	85	786	85	-786	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAGAGTAGGATGGTGA	NA	False	NA	NA	False	AATACA	-17	NA	9047239	9016818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.30	chr5	-	2542	5	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-112	29	intron_retention	FALSE	canonical	3	180	junction_1	26.0324316958674	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCACTTACCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	9047154	9036151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.31	chr5	-	3902	4	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	130	29	intron_retention	FALSE	canonical	3	200	junction_3	19.1543438647449	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCACTTACCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	9047194	9036151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.32	chr5	-	6735	1	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	4155	28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGCACTTACCTCTTT	NA	False	NA	NA	False	NA	NA	NA	9042887	9036152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9036200_9042900
ES.25421.33	chr5	-	2292	6	ISM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	178	20150	-104	-2	5prime_fragment	FALSE	canonical	3	180	junction_2	23.4179418395383	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ACTAAA	-44	NA	9047146	9036182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.34	chr5	-	1652	7	NNC	ENSMUSG00000003623.5	novel	2746	5	NA	NA	-119	-86	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	82.5684900888684	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATAATCTGAATGAATT	NA	False	NA	NA	False	AATAAA	-20	NA	9047161	9036266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9037197_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.4	chr5	-	6766	19	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-124	4021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.6658138329784	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTTCTCTCACATAC	NA	False	NA	NA	False	NA	NA	NA	9047166	9012011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9015300_9015392_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.6	chr5	-	5457	19	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-123	2713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.6658138329784	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCAGTGGGTTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	9047165	9013319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9015300_9015392_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.8	chr5	-	5327	19	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-125	2579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.6658138329784	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCATAGTGCTCAAT	NA	False	NA	NA	False	AATATA	-14	NA	9047167	9013453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9015302_9015392_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25421.9	chr5	-	5433	20	NNC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-102	2575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.5873932763367	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATATTCATAGTGCT	NA	False	NA	NA	False	AATATA	-10	NA	9047144	9013457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9015298_9015389_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037062_9037197_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ES.25422.1	chr5	+	179	1	Genic_Genomic	ENSMUSG00000114430.2	novel	NA	NA	NA	NA	1043	91	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	9086166	9086345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_9086200_9086300
ES.25423.1	chr5	+	3568	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-69	-2459	10	2459	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTCTCCCTTTCCCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	9150677	9171504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
ES.25423.2	chr5	+	1088	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-48	0	31	0	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTCCTCCTTT	NA	False	NA	10	True	AATAAA	-21	NA	9150698	9169045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
ES.25423.3	chr5	+	526	3	NNC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	36	-14223	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	100	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTACGGCCATTTTGTAG	NA	False	NA	NA	False	AATAAA	-12	NA	9150703	9154760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_9150860_9151216_9151396_9154569
ES.25423.4	chr5	+	2189	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	-16	-1133	-16	1133	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTGATTCTCCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	9150730	9170178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
ES.25423.5	chr5	+	174	1	Intergenic	novelGene_21197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACTGA	NA	False	NA	NA	False	NA	NA	NA	9159154	9159328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_9159200_9159300
ES.25423.6	chr5	+	4832	1	NIC	ENSMUSG00000079659.6	novel	1040	5	NA	NA	963	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTTTTTTTTTCCTCC	2324	False	NA	7	True	AATAAA	-18	NA	9164210	9169042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_9164200_9169000
ES.25423.7	chr5	+	3382	1	Genic_Genomic	ENSMUSG00000079659.6	novel	NA	NA	NA	NA	4870	2454	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAACTGTCTCCCTTT	6231	False	NA	NA	False	ATTAAA	-23	NA	9168117	9171499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_9168100_9171500
ES.25424.1	chr5	+	182	1	FSM	ENSMUSG00000079659.6	ENSMUST00000200542.2	5254	1	3582	1490	3582	1416	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAACAAAAATACCAA	NA	False	NA	NA	False	NA	NA	NA	9209314	9209496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9209300_9209500
ES.25425.1	chr5	-	178	1	Intergenic	novelGene_21196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	8424	False	NA	NA	False	NA	NA	NA	9153303	9153125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_9153100_9153300
ES.25426.1	chr5	-	3833	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	-23	-4	-23	4	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATTCCTTGCTATTT	NA	False	NA	70	True	NA	NA	NA	9211799	9168796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.10	chr5	-	3758	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.7962672871899	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211762	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182482_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.11	chr5	-	6987	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	216	junction_7	20.6967522948784	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211745	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.12	chr5	-	3242	14	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	74.1362092016641	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211768	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179198_9187117_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.13	chr5	-	3678	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-4	-9	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	60.8953950225146	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCTTTCAAAAGTGAGAA	NA	False	NA	57	True	ATTAAA	-37	NA	9211763	9168809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176644_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.14	chr5	-	3759	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	90.8210148996632	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCTTTCAAAAGTGAG	NA	False	NA	55	True	ATTAAA	-35	NA	9211746	9168811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9202876_9202994_9211613
ES.25426.15	chr5	-	3615	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	1	27	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	61.258640972111	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	26	True	ATTAAA	-6	NA	9211748	9168840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ES.25426.16	chr5	-	8908	1	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-1172	26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	NA	False	NA	25	True	ATTAAA	-5	NA	9177749	9168841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9168800_9177700
ES.25426.17	chr5	-	3400	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	-8	25	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	69.8844761016351	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAACAAA	NA	False	NA	24	True	ATTAAA	-4	NA	9211767	9168842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.18	chr5	-	3816	19	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	80.8163594244215	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211736	9168867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9202876_9202994_9211613
ES.25426.19	chr5	-	3888	18	FSM	ENSMUSG00000042508.17	ENSMUST00000184888.8	3892	18	9	-5	-1	0	multi-exon	FALSE	canonical	3	5	junction_9	65.4104951209844	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211750	9168867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180653_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.2	chr5	-	3617	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	-55	-64	-28	-7	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211804	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.20	chr5	-	3688	17	NIC	ENSMUSG00000042508.17	novel	3892	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	67.2704139555422	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211760	9168867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180653_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.21	chr5	-	3627	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	66.9289502009407	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211759	9168867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.22	chr5	-	3409	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	63.215469274186	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGAGCCATGCAATT	NA	False	NA	-2	True	AATAAA	-23	NA	9211780	9168868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ES.25426.23	chr5	-	2898	11	NNC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.9910199967323	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211754	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176727_9177956_9178109_9179147_9179377_9180367_9180478_9201873_9201919_9211613
ES.25426.24	chr5	-	3709	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.3263301568725	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211750	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190475_9198895_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.25	chr5	-	3254	15	NNC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	90.0703806441816	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211777	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190475_9200375_9200493_9201797_9201919_9211613
ES.25426.26	chr5	-	7977	15	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	216	junction_6	20.5675839661367	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211758	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.28	chr5	-	3707	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	64.658485314639	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211761	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171923_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.29	chr5	-	3467	17	NNC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.7730588065789	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211743	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182482_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.3	chr5	-	3695	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	79.9925777806916	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211734	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179438_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ES.25426.30	chr5	-	3646	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	83.3899830516616	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211778	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9202876_9202994_9211613
ES.25426.31	chr5	-	3884	16	NIC	ENSMUSG00000042508.17	novel	3921	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	82.7767009624219	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTGAGCCATGCAAT	NA	False	NA	-3	True	AATAAA	-22	NA	9211732	9168869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9172462_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ES.25426.35	chr5	-	4560	17	NIC	ENSMUSG00000042508.17	novel	3926	18	NA	NA	0	1	intron_retention	FALSE	canonical	3	10	junction_6	62.2995535698291	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTTTGAGCCATGCAA	NA	False	NA	-4	True	AATAAA	-21	NA	9211749	9168870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176803_9177956_9178109_9179147_9179377_9180367_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.36	chr5	-	5893	16	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-1	1	intron_retention	FALSE	canonical	3	158	junction_5	29.664494302486	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTTTGAGCCATGCAA	NA	False	NA	-4	True	AATAAA	-21	NA	9211735	9168870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9178109_9179147_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.37	chr5	-	3680	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.3263301568725	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATTTTGAGCCATGC	NA	False	NA	-6	True	AATAAA	-19	NA	9211739	9168872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190464_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.38	chr5	-	4212	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	65.8127783892153	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATTTTGAGCCATGC	NA	False	NA	-6	True	AATAAA	-19	NA	9211730	9168872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9172462_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.39	chr5	-	4113	19	NNC	ENSMUSG00000042508.17	novel	3892	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.9845500242372	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATTTTGAGCCATGC	NA	False	NA	-6	True	AATAAA	-19	NA	9211749	9168872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9172230_9172462_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180653_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.4	chr5	-	5229	17	NNC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	7	-7	intron_retention	FALSE	canonical	0	0	junction_5	62.2172353532363	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211769	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176309_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.40	chr5	-	3414	16	NIC	ENSMUSG00000042508.17	novel	3926	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	63.5882588743132	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATTTTGAGCCATGC	NA	False	NA	-6	True	AATAAA	-19	NA	9211752	9168872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.41	chr5	-	3261	15	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	71.7788909337102	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGATTTTGAGCCATG	NA	False	NA	-7	True	AATAAA	-18	NA	9211732	9168873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9200375_9200493_9201797_9201919_9211613
ES.25426.42	chr5	-	3697	17	NIC	ENSMUSG00000042508.17	novel	3926	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	68.2814716815623	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAGATTTTGAGCCATG	NA	False	NA	-7	True	AATAAA	-18	NA	9211734	9168873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180694_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.43	chr5	-	5723	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	130	junction_5	33.9733351321297	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGATTTTGAGCCAT	NA	False	NA	-8	True	AATAAA	-17	NA	9211755	9168874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.44	chr5	-	5079	17	NIC	ENSMUSG00000042508.17	novel	3892	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_8	63.3810093304769	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9211743	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9178109_9179147_9179377_9180367_9180653_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.45	chr5	-	3648	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	66.2248973137856	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9211700	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199017_9200375_9200493_9201797_9201919_9211613
ES.25426.46	chr5	-	3521	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	67.3560676090135	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9211725	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.47	chr5	-	7880	15	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	216	junction_6	21.4182117815276	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9211716	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9178109_9179147_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.48	chr5	-	3524	17	NNC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.1750676108942	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9211786	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186129_9187117_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.5	chr5	-	3668	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-14	-7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	67.792854297116	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211790	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.50	chr5	-	7060	3	ISM	ENSMUSG00000042508.17	ENSMUST00000184401.8	5057	18	26411	0	-160	0	intron_retention	FALSE	canonical	3	217	junction_1	5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	False	NA	-10	True	AATAAA	-15	NA	9176737	9168876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_9170139_9170349_9170495_9171084
ES.25426.51	chr5	-	3481	17	FSM	ENSMUSG00000042508.17	ENSMUST00000184159.8	3453	17	-38	10	2	-1	multi-exon	FALSE	canonical	1	8	junction_6	77.1025848707422	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGCAAGATTTTGAGC	NA	False	NA	-11	True	AATAAA	-14	NA	9211757	9168877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176644_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
ES.25426.52	chr5	-	3733	18	NNC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.3759868197647	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGCAAGATTTTGAG	NA	False	NA	-12	True	AATAAA	-13	NA	9211737	9168878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201963_9211613
ES.25426.53	chr5	-	4144	4	ISM	ENSMUSG00000042508.17	ENSMUST00000184401.8	5057	18	29006	2	2435	-2	3prime_fragment	FALSE	canonical	3	217	junction_1	29.044027881056	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGCAAGATTTTGAG	NA	False	NA	-12	True	AATAAA	-13	NA	9174142	9168878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781
ES.25426.54	chr5	-	3642	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	46	118	4	-42	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTATATTCAGTTTAACA	NA	False	NA	-52	True	NA	NA	NA	9211730	9168918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.55	chr5	-	4834	2	NNC	ENSMUSG00000042508.17	novel	1145	5	NA	NA	7697	374	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9194348	9189443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9190538_9190608
ES.25426.56	chr5	-	1808	4	FSM	ENSMUSG00000042508.17	ENSMUST00000185193.8	3029	4	33	1188	0	-1188	multi-exon	FALSE	canonical	3	222	junction_3	21.853044537445	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCCTCTTTTTTTATT	NA	False	NA	NA	False	TATAAA	-25	NA	9211716	9197555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.6	chr5	-	5543	6	ISM	ENSMUSG00000042508.17	ENSMUST00000184401.8	5057	18	23162	-69	-3409	-7	intron_retention	FALSE	canonical	3	158	junction_5	40.9760905895133	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9179986	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539
ES.25426.7	chr5	-	4998	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	8	-7	intron_retention	FALSE	canonical	3	158	junction_5	28.7793328623163	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211768	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.8	chr5	-	3873	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	-21	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	60.4775688348989	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211797	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176803_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25426.9	chr5	-	3567	17	NNC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	66.5656395973178	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAAAGTGAGAATT	NA	False	NA	59	True	ATTAAA	-39	NA	9211769	9168807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171923_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ES.25427.1	chr5	+	3262	1	Intergenic	novelGene_21198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGCCTACAGAGCACCT	NA	False	NA	NA	False	NA	NA	NA	9211845	9215107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_9211800_9215100
ES.25428.1	chr5	-	170	1	Intergenic	novelGene_21199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	9234155	9233985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_9234000_9234200
ES.25429.1	chr5	+	232	1	Intergenic	novelGene_21200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAAGCAGCTGTGAGAA	6369	False	NA	NA	False	AAGAAA	-3	NA	9301774	9302006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_9301800_9302000
ES.2543.1	chr10	+	6650	2	Intergenic	novelGene_1929	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	30965069	30971767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_30971657_30971704
ES.25430.1	chr5	-	346	1	FSM	ENSMUSG00000080875.5	ENSMUST00000118351.3	454	1	396	-288	396	288	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCATGAAAGAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	9310992	9310646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_9310600_9311000
ES.25431.1	chr5	+	4140	21	FSM	ENSMUSG00000056004.17	ENSMUST00000134991.8	4115	21	-21	-4	-7	4	multi-exon	FALSE	canonical	0	0	junction_3	2.3685438564654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGTTTATTTCACAA	NA	False	NA	NA	False	AATAAA	-21	NA	9316110	9513987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868
ES.25431.2	chr5	+	8645	22	FSM	ENSMUSG00000056004.17	ENSMUST00000069538.14	4688	22	-9	-3948	-4	2840	multi-exon	FALSE	canonical	0	0	junction_3	2.48624332994412	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTGTGCTGGAACATCA	NA	False	NA	NA	False	AATAAA	-21	NA	9316122	9534665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868_9513035_9529195
ES.25431.3	chr5	+	3909	21	FSM	ENSMUSG00000056004.17	ENSMUST00000134991.8	4115	21	6	200	6	184	multi-exon	FALSE	canonical	0	0	junction_3	2.3685438564654	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTCTCTTTCTATATG	NA	False	NA	NA	False	AATAAA	-15	NA	9316137	9513783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868
ES.25432.1	chr5	-	221	1	Intergenic	novelGene_21201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGGATCCAACTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	9735480	9735259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_9735300_9735500
ES.25433.1	chr5	+	196	1	Intergenic	novelGene_21202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAAGGTTAATGGAA	NA	False	NA	NA	False	NA	NA	NA	9917142	9917338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_9917100_9917300
ES.25434.1	chr5	+	2285	3	FSM	ENSMUSG00000073226.10	ENSMUST00000189825.2	2287	3	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCACGTGGCCCTGGCT	3883	False	NA	NA	False	NA	NA	NA	10237840	10287722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_10237957_10283829_10284043_10285766
ES.25435.1	chr5	+	166	1	Intergenic	novelGene_21203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAGTAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	10812232	10812398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_10812200_10812400
ES.25436.1	chr5	+	159	1	Intergenic	novelGene_21204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11074539	11074698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_11074500_11074700
ES.25437.1	chr5	+	183	1	Intergenic	novelGene_21205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11162078	11162261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_11162100_11162300
ES.25438.1	chr5	+	240	1	Intergenic	novelGene_21206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTATTAAAATCTTTCTA	NA	False	NA	NA	False	AAAAAG	-25	NA	11629386	11629626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_11629400_11629600
ES.25439.1	chr5	+	230	1	Intergenic	novelGene_21207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTATTAAAATCTTTCT	NA	False	NA	NA	False	AAAAAG	-24	NA	11716445	11716675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_11716400_11716700
ES.2544.1	chr10	+	884	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	-25	-1	-25	1	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTCTGTTTTGCA	NA	False	NA	21	True	ATTAAA	-28	NA	31189353	31204201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.10	chr10	+	1755	5	ISM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	131	3	42	-1	3prime_fragment	FALSE	canonical	3	475	junction_3	17.4212513901843	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTCTGTCTTCTGTTT	NA	False	NA	17	True	ATTAAA	-24	NA	31189509	31204197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.11	chr10	+	1174	6	NNC	ENSMUSG00000000295.14	novel	631	3	NA	NA	252	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.207292574471	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTGTTA	NA	False	NA	-9	True	NA	NA	NA	31189719	31204171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_31190166_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.12	chr10	+	636	4	ISM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	2908	1	2819	1	3prime_fragment	FALSE	canonical	3	475	junction_2	11.2644968324772	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTGTCTTCTGTTTTG	NA	False	NA	19	True	ATTAAA	-26	NA	31192286	31204199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.2	chr10	+	4681	1	Genic_Genomic	ENSMUSG00000000295.14	novel	NA	NA	NA	NA	-9	211	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTTTGCTTGACAGAA	NA	False	NA	NA	False	NA	NA	NA	31189369	31194050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_31189400_31194000
ES.2544.3	chr10	+	6414	4	NIC	ENSMUSG00000000295.14	novel	858	6	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_2	233.581296815953	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTCTGTCTTCTGTTT	NA	False	NA	17	True	ATTAAA	-24	NA	31189401	31204197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_31189480_31190510_31190633_31196263_31202157_31203876
ES.2544.4	chr10	+	817	6	NNC	ENSMUSG00000000295.14	novel	858	6	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.6	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTGTCTTCTGTTTTG	NA	False	NA	19	True	ATTAAA	-26	NA	31189401	31204199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_31189480_31190512_31190633_31192288_31192386_31196263_31196328_31202017_31202153_31203876
ES.2544.5	chr10	+	1932	3	FSM	ENSMUSG00000000295.14	ENSMUST00000162076.2	941	3	1	-992	1	181	multi-exon	FALSE	canonical	3	497	junction_1	13.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31189401	31194020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_31189480_31190510_31190633_31192288
ES.2544.6	chr10	+	6508	5	NIC	ENSMUSG00000000295.14	novel	858	6	NA	NA	1	8	intron_retention	FALSE	canonical	3	496	junction_4	11.4127122105133	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACACTCCAGACTCTGT	NA	False	NA	8	True	ATTAAA	-15	NA	31189401	31204188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31202157_31203876
ES.2544.7	chr10	+	4798	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	24	-3964	0	3964	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCGCCTGTGGCTCTCT	NA	False	NA	NA	False	TATAAA	-21	NA	31189402	31208164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.8	chr10	+	963	7	NNC	ENSMUSG00000000295.14	novel	819	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.632339874652	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTGTTA	NA	False	NA	-9	True	NA	NA	NA	31189402	31204171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_31189513_31189569_31189695_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.2544.9	chr10	+	964	6	NNC	ENSMUSG00000000295.14	novel	631	3	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.023485765176	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTGTCTTCTGTTTTG	NA	False	NA	19	True	ATTAAA	-26	NA	31189486	31204199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_31189695_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ES.25440.1	chr5	+	102	1	Intergenic	novelGene_21208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAACAAACAGTCATATA	NA	False	NA	NA	False	NA	NA	NA	12205070	12205172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_12205100_12205200
ES.25441.1	chr5	+	182	1	Intergenic	novelGene_21209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12261199	12261381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_12261200_12261400
ES.25442.1	chr5	-	179	1	Intergenic	novelGene_21210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12387202	12387023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_12387000_12387200
ES.25443.1	chr5	-	2463	1	Intergenic	novelGene_21211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGACAGAAAGATTGTAAC	NA	False	NA	NA	False	NA	NA	NA	12428284	12425821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_12425800_12428300
ES.25444.1	chr5	+	6386	18	FSM	ENSMUSG00000040254.12	ENSMUST00000030868.11	6307	18	-79	0	-79	0	multi-exon	FALSE	canonical	0	0	junction_1	0.775935644604289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTTATGTGTAAAGAT	NA	False	NA	NA	False	AATAAA	-31	NA	12433272	12638915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_12433642_12497958_12498147_12513182_12513344_12534921_12534985_12547454_12547575_12555769_12555864_12558058_12558188_12574217_12574361_12590983_12591099_12592548_12592619_12603044_12603190_12613115_12613339_12615911_12616001_12618255_12618298_12620940_12621099_12623795_12623861_12627578_12627719_12634843
ES.25444.2	chr5	+	4068	1	NIC	ENSMUSG00000040254.12	novel	6307	18	NA	NA	9081	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTGTTGTTATGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	12634841	12638909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_12634800_12638900
ES.25445.1	chr5	+	3414	1	Intergenic	novelGene_21212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGAAAGGAAATG	NA	False	NA	NA	False	AATAAA	-11	NA	12738661	12742075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_12738700_12742100
ES.25446.1	chr5	-	177	1	Intergenic	novelGene_21213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12895862	12895685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_12895700_12895900
ES.25447.1	chr5	-	156	1	Intergenic	novelGene_21214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12909326	12909170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_12909200_12909300
ES.25448.1	chr5	-	159	1	Intergenic	novelGene_21215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	12926333	12926174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_12926200_12926300
ES.25449.1	chr5	+	147	1	Intergenic	novelGene_21216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	12975204	12975351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_12975200_12975400
ES.2545.1	chr10	+	7118	1	Intergenic	novelGene_1930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	31235399	31242517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_31235400_31242500
ES.25450.1	chr5	-	349	1	FSM	ENSMUSG00000096810.2	ENSMUST00000179228.2	1002	1	835	-182	835	182	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTCTACAAAC	NA	False	NA	NA	False	AATAAA	-16	NA	13092566	13092217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_13092200_13092600
ES.25451.1	chr5	-	527	1	FSM	ENSMUSG00000062038.6	ENSMUST00000078246.6	319	1	-65	-143	-65	143	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGGTACGGTCTTTAT	NA	False	NA	NA	False	AGTAAA	-14	NA	13171798	13171271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_13171300_13171800
ES.25451.2	chr5	-	256	1	FSM	ENSMUSG00000062038.6	ENSMUST00000078246.6	319	1	83	-20	83	20	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTCTCATGGCT	NA	False	NA	NA	False	AAAAAG	-37	NA	13171650	13171394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_13171400_13171600
ES.25452.1	chr5	-	182	1	Intergenic	novelGene_21217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGATAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	14014771	14014589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_14014600_14014800
ES.25453.1	chr5	+	174	1	Intergenic	novelGene_21218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTGTATTTACTAT	NA	False	NA	NA	False	NA	NA	NA	14019139	14019313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_14019100_14019300
ES.25454.1	chr5	+	6616	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	-4	249	-4	-249	multi-exon	FALSE	canonical	0	0	junction_1	1.82752393965168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGAGTGTCTTTGTCTC	NA	False	NA	NA	False	NA	NA	NA	14075285	14306454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ES.25454.2	chr5	+	4334	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	7	2520	7	-145	multi-exon	FALSE	canonical	0	0	junction_1	1.82752393965168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAATGGATTTCTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	14075296	14304183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ES.25454.3	chr5	+	4469	17	NNC	ENSMUSG00000063531.8	novel	6861	17	NA	NA	24	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.93548282090025	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACACGTTATTGACTGT	NA	False	NA	NA	False	AATAAA	-24	NA	14075313	14304333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_14076039_14193887_14194049_14212199_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ES.25454.4	chr5	+	3356	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	48	3457	48	-1082	multi-exon	FALSE	canonical	0	0	junction_1	1.82752393965168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTATCGTGTGAGCTTT	NA	False	NA	NA	False	AATATA	-19	NA	14075337	14303246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ES.25454.5	chr5	+	3093	18	NNC	ENSMUSG00000063531.8	novel	6861	17	NA	NA	186	-1161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.88235294117647	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTCTGGAGTTTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	14075475	14303167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_14075945_14075990_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ES.25455.1	chr5	-	1306	2	NIC	ENSMUSG00000085352.2	novel	461	4	NA	NA	9	825	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCAAATCACTGAGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	14124162	14105626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_14106883_14124112
ES.25456.1	chr5	-	163	1	Intergenic	novelGene_21219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	14272697	14272534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_14272500_14272700
ES.25457.1	chr5	+	5084	5	NNC	ENSMUSG00000061601.16	novel	16846	20	NA	NA	-26	-216555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTATACAGAGTTTATC	NA	False	NA	NA	False	AATAAA	-16	NA	14564980	14629452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_14565475_14570855_14572339_14589423_14590816_14626887_14627240_14628089
ES.25457.2	chr5	+	4829	1	NIC	ENSMUSG00000061601.16	novel	16846	20	NA	NA	250	-275922	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCATGGAGAATGTGAT	NA	False	NA	NA	False	AATAAA	-30	NA	14565256	14570085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_14565300_14570100
ES.25458.1	chr5	+	5377	13	NNC	ENSMUSG00000061601.16	novel	16846	20	NA	NA	31812	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.276385399196283	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGGGTTCTGAGCCATT	NA	False	NA	NA	False	AATAAA	-27	NA	14762688	14846021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_14764613_14768870_14769008_14773247_14773339_14800492_14800619_14815167_14815277_14815812_14815881_14816740_14816956_14820309_14820361_14825333_14825459_14838411_14838510_14840373_14840450_14841925_14842107_14843845
ES.25459.1	chr5	+	7388	38	FSM	ENSMUSG00000040118.16	ENSMUST00000199704.5	3861	38	-88	-3439	9	-3	multi-exon	TRUE	canonical	0	0	junction_1	1.00764064228688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGGAGTTTTGCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	16139697	16579506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_16140107_16217391_16217474_16230746_16230864_16367990_16368051_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16531324_16531382_16532970_16533043_16538761_16538824_16545704_16545782_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ES.25459.2	chr5	+	7496	39	NNC	ENSMUSG00000040118.16	novel	7311	38	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1.00449129915749	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACAGTTGGAGTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	16139705	16579502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_16140107_16214914_16215019_16217391_16217474_16230746_16230864_16367990_16368051_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16531324_16531382_16532970_16533043_16538761_16538824_16545704_16545798_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ES.25459.3	chr5	+	6842	35	NNC	ENSMUSG00000040118.16	novel	720	4	NA	NA	-144706	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.0394468851219	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACAGTTGGAGTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	16386276	16579502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_16386387_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16531324_16531382_16532970_16533043_16538761_16538824_16545704_16545798_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ES.25459.4	chr5	+	5199	23	NNC	ENSMUSG00000040118.16	novel	7311	38	NA	NA	-11060	1067	intron_retention	FALSE	non_canonical	0	0	junction_4	1.04446593573419	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCTTGGTGAAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	16519922	16577134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16529570_16529668_16531309_16531382_16532970_16533043_16538761_16538824_16545704_16545798_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16561870_16562286_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ES.2546.1	chr10	+	206	1	Intergenic	novelGene_1931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCCCTTCCGCTCCACT	NA	False	NA	NA	False	NA	NA	NA	31281182	31281388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_31281200_31281400
ES.25460.1	chr5	-	184	1	Intergenic	novelGene_21220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16297406	16297222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_16297200_16297400
ES.25461.1	chr5	+	1021	7	NNC	ENSMUSG00000028864.8	novel	1633	6	NA	NA	-227	-714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGACTACGCTGTTCAT	2536	False	NA	NA	False	ATTAAA	-23	NA	16758265	16777718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_16758340_16758464_16758643_16758870_16759017_16765956_16766123_16769784_16769898_16771744_16771860_16777489
ES.25462.1	chr5	-	329	1	Intergenic	novelGene_21221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	16934935	16934606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_16934600_16934900
ES.25463.1	chr5	-	3740	3	NNC	ENSMUSG00000091273.2	novel	700	5	NA	NA	-16574	3156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGGTTGTATGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	17449506	17425551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_17428823_17429514_17429699_17449221
ES.25464.1	chr5	+	131	1	Intergenic	novelGene_21222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17674440	17674571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_17674400_17674600
ES.25465.2	chr5	+	3479	18	FSM	ENSMUSG00000028780.14	ENSMUST00000030568.14	5491	18	316	1696	-52	-1693	multi-exon	FALSE	canonical	0	0	junction_1	1.78420598683566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTACTGTTTTGGTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	17779594	17933570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_17779964_17781827_17781969_17858705_17858867_17860000_17860064_17867917_17868038_17875447_17875539_17877426_17877547_17880039_17880183_17881308_17881424_17883309_17883380_17886936_17887082_17899640_17899864_17916383_17916473_17919408_17919451_17921908_17922067_17926851_17926920_17929078_17929210_17932340
ES.25465.3	chr5	+	3981	18	FSM	ENSMUSG00000028780.14	ENSMUST00000030568.14	5491	18	367	1143	-1	-1140	multi-exon	FALSE	canonical	0	0	junction_1	1.78420598683566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTTAATTATACAACT	NA	False	NA	NA	False	AATAAA	-21	NA	17779645	17934123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_17779964_17781827_17781969_17858705_17858867_17860000_17860064_17867917_17868038_17875447_17875539_17877426_17877547_17880039_17880183_17881308_17881424_17883309_17883380_17886936_17887082_17899640_17899864_17916383_17916473_17919408_17919451_17921908_17922067_17926851_17926920_17929078_17929210_17932340
ES.25465.4	chr5	+	5124	18	FSM	ENSMUSG00000028780.14	ENSMUST00000030568.14	5491	18	367	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	1.78420598683566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCACTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	17779645	17935266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_17779964_17781827_17781969_17858705_17858867_17860000_17860064_17867917_17868038_17875447_17875539_17877426_17877547_17880039_17880183_17881308_17881424_17883309_17883380_17886936_17887082_17899640_17899864_17916383_17916473_17919408_17919451_17921908_17922067_17926851_17926920_17929078_17929210_17932340
ES.25466.1	chr5	-	979	8	Antisense	novelGene_ENSMUSG00000028777.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.728431359084683	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTTTGTCTTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	18287068	18222880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_18223012_18225439_18225526_18225672_18225723_18232767_18232857_18233236_18233313_18234130_18234270_18234986_18235101_18286774
ES.25467.1	chr5	+	6301	1	Intergenic	novelGene_21223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGCCTGAAATCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	18503324	18509625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_18503300_18509600
ES.25468.1	chr5	-	4198	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-128	-935	-128	935	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCAGTCAAAGCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	18565481	18469197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ES.25468.10	chr5	-	3582	6	ISM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	49774	5621	49774	-5621	internal_fragment	FALSE	canonical	3	135	junction_2	13.4966662550424	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAACTGGTTGTTGGTGGG	NA	False	NA	NA	False	AATAAA	-19	NA	18515579	18475753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780
ES.25468.2	chr5	-	4573	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	-1432	-6	-1432	6	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGAATTTATTTTC	NA	False	NA	-1	True	AATAAA	-27	NA	18566785	18470126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ES.25468.3	chr5	-	3274	8	NNC	ENSMUSG00000057614.7	novel	3135	8	NA	NA	-131	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.9151479046333	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTGACTGAATTTATTT	NA	False	NA	-3	True	AATAAA	-25	NA	18565484	18470128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_18472208_18476823_18476978_18478439_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ES.25468.5	chr5	-	3228	8	NNC	ENSMUSG00000057614.7	novel	3135	8	NA	NA	-107	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.5093139392017	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTATTGACTGAATTTA	NA	False	NA	-6	True	AATAAA	-22	NA	18565460	18470131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513674_18513776_18513824_18565049
ES.25468.6	chr5	-	3230	8	NNC	ENSMUSG00000057614.7	novel	3135	8	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4504457482169	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTATTGACTGAATTTA	NA	False	NA	-6	True	AATAAA	-22	NA	18565414	18470131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_18472242_18476823_18476978_18478444_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ES.25469.1	chr5	-	155	1	Intergenic	novelGene_21224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAATAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20017088	20016933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20016900_20017100
ES.2547.1	chr10	+	3556	1	Antisense	novelGene_ENSMUSG00000110758.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGGTTTGAGCGAGAG	NA	False	NA	NA	False	NA	NA	NA	31302045	31305601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_31302000_31305600
ES.25470.1	chr5	+	177	1	Intergenic	novelGene_21225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4819	False	NA	NA	False	NA	NA	NA	20122375	20122552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_20122400_20122600
ES.25471.1	chr5	-	3728	1	Intergenic	novelGene_21226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	20174894	20171166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20171200_20174900
ES.25472.1	chr5	-	160	1	Intergenic	novelGene_21227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	20333057	20332897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20332900_20333100
ES.25473.1	chr5	-	3670	2	Antisense	novelGene_ENSMUSG00000040003.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGATTGTTCTCTCAT	2921	False	NA	NA	False	ATTAAA	-32	NA	20691805	20665336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_20665345_20688143
ES.25474.1	chr5	+	3926	8	NNC	ENSMUSG00000040003.19	novel	899	6	NA	NA	-33901	2	intron_retention	FALSE	canonical	1	1	junction_1	2.38190457150472	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCCAGCTATAT	NA	False	NA	10	True	AATAAA	-18	NA	20773593	20909773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_20773725_20774103_20774353_20805775_20805962_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
ES.25474.2	chr5	+	3556	6	NNC	ENSMUSG00000040003.19	novel	899	6	NA	NA	-860	-7	intron_retention	FALSE	canonical	0	0	junction_1	3.00665927567458	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAAATCTTTTCTTTTTC	NA	False	NA	1	True	AATAAA	-9	NA	20806634	20909764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_20806840_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
ES.25474.3	chr5	+	2394	6	NNC	ENSMUSG00000040003.19	novel	899	6	NA	NA	-742	797	intron_retention	FALSE	canonical	0	0	junction_1	3.00665927567458	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTTCTGCTTTCCTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	20806752	20908720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_20806840_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067
ES.25474.4	chr5	+	3644	2	Intergenic	novelGene_21229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	20858869	20862742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_20861497_20861725
ES.25474.5	chr5	+	105	1	Intergenic	novelGene_21231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAAAG	1290	False	NA	NA	False	NA	NA	NA	20883775	20883880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_20883800_20883900
ES.25475.1	chr5	-	4224	11	Antisense	novelGene_ENSMUSG00000106240.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTTTATATAGCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	20897324	20738159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_20740796_20741198_20741259_20741398_20741562_20742207_20742376_20773444_20773610_20774153_20774370_20775879_20776020_20777060_20777201_20892776_20892910_20896792_20897121_20897249
ES.25475.2	chr5	-	183	1	Intergenic	novelGene_21228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATAACATA	NA	False	NA	NA	False	NA	NA	NA	20835092	20834909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20834900_20835100
ES.25475.3	chr5	-	248	1	Intergenic	novelGene_21230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCTGTGAATAATTAA	NA	False	NA	NA	False	ATTAAA	-33	NA	20861722	20861474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20861500_20861700
ES.25476.1	chr5	-	174	1	Intergenic	novelGene_21232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAAGAAAAGGAGCC	998	False	NA	NA	False	NA	NA	NA	20950798	20950624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20950600_20950800
ES.25477.1	chr5	-	207	1	Intergenic	novelGene_21233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	20963451	20963244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_20963200_20963500
ES.25478.1	chr5	+	178	1	Intergenic	novelGene_21236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21052595	21052773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21052600_21052800
ES.25479.1	chr5	+	5311	1	Intergenic	novelGene_21238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCTGACTCCTAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	21079740	21085051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21079700_21085100
ES.2548.1	chr10	-	1252	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-140	-9	-36	8	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTATTTCTTTGTTGG	NA	False	NA	5	True	ATTAAA	-25	NA	31321990	31208363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.10	chr10	-	939	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-157	45	4	-45	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTGATGACCACTA	NA	False	NA	-20	True	AATAAA	-16	NA	31321950	31208697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.11	chr10	-	743	5	NNC	ENSMUSG00000000296.9	novel	1103	5	NA	NA	-13218	-45	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	197.42910119838	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGTTGATGACCACTA	NA	False	NA	-20	True	AATAAA	-16	NA	31335172	31208697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31335064
ES.2548.12	chr10	-	9342	1	NIC	ENSMUSG00000000296.9	novel	1308	7	NA	NA	102632	-1167	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTCAGAGGTAGGCTG	NA	False	NA	NA	False	NA	NA	NA	31219161	31209819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_31209800_31219200
ES.2548.13	chr10	-	3359	4	ISM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	-8	11144	-8	-11114	5prime_fragment	FALSE	canonical	3	467	junction_1	21.6692306175267	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACCATGGTCAGTCT	NA	False	NA	NA	False	TATAAA	-27	NA	31321859	31219766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.14	chr10	-	4817	1	FSM	ENSMUSG00000110960.2	ENSMUST00000214434.2	351	1	-4159	-307	-4159	307	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	31294320	31289503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31289500_31294300
ES.2548.15	chr10	-	188	1	Intergenic	novelGene_1932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	31334413	31334225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_31334200_31334400
ES.2548.2	chr10	-	1284	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	27	-3	27	3	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	0	True	ATTAAA	-20	NA	31321927	31208368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.3	chr10	-	1177	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-66	-284	-8	3	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGATCTTTTATTTCTTT	NA	False	NA	0	True	ATTAAA	-20	NA	31321859	31208368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.4	chr10	-	5592	2	ISM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	102777	-1	102616	1	intron_retention	FALSE	canonical	3	64	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGATCTTTTATTTCT	NA	False	NA	-2	True	ATTAAA	-18	NA	31219177	31208370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_31208966_31214180
ES.2548.6	chr10	-	2225	1	NIC	ENSMUSG00000000296.9	novel	1308	7	NA	NA	111196	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31210597	31208372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_31208400_31210600
ES.2548.7	chr10	-	1287	7	NNC	ENSMUSG00000000296.9	novel	1308	7	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	231.746568954585	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATGGCTGGATCTTTTA	NA	False	NA	-7	True	ATTAAA	-13	NA	31321928	31208375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_31208966_31214180_31214242_31217135_31217175_31222597_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.8	chr10	-	810	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	-13	306	-12	-26	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGGAGTATTTACAAAT	NA	False	NA	-1	True	AATAAA	-35	NA	31321863	31208678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ES.2548.9	chr10	-	9166	5	NIC	ENSMUSG00000000296.9	novel	827	6	NA	NA	4	-44	intron_retention	FALSE	canonical	3	64	junction_1	186.564332068056	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTGATGACCACTAC	NA	False	NA	-19	True	AATAAA	-17	NA	31321811	31208696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_31208966_31214180_31222709_31233867_31234017_31255210_31255327_31321707
ES.25480.1	chr5	-	4791	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	12	7	combination_of_known_junctions	TRUE	canonical	3	53	junction_9	51.0853143531539	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATAGTTTGTTTAAGT	NA	False	NA	3	True	AATAAA	-20	NA	21087110	20963653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.10	chr5	-	4508	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.7461794347497	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087107	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979074_20979240_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.11	chr5	-	4681	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-27	-106	combination_of_known_splicesites	FALSE	canonical	1	9	junction_16	53.3853546747608	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087149	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.12	chr5	-	4482	16	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-31	-106	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	74.6966011423694	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087153	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21012401_21012472_21018237_21018295_21086953
ES.25480.13	chr5	-	4489	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	1	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.1252925111665	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087042	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.14	chr5	-	4680	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	4	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	70.1595404140528	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087039	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21058121_21058151_21060119_21060200_21086953
ES.25480.15	chr5	-	4747	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-6	-106	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	69.6072092548388	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087082	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21045360_21045414_21060119_21060200_21086953
ES.25480.16	chr5	-	4800	20	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	13	-107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	85.4015770514859	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087109	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006901_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21045360_21045414_21058121_21058151_21060119_21060200_21086953
ES.25480.17	chr5	-	7135	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	22	-107	intron_retention	FALSE	canonical	3	159	junction_8	38.7725740698242	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087100	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.18	chr5	-	4640	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-107	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	66.6397119672096	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087107	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.19	chr5	-	4540	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-29	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.1807494977135	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087151	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20964162_20964383_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.2	chr5	-	4891	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	-45	-6	-45	6	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCATAGTTTGTTTAAG	NA	False	NA	2	True	AATAAA	-19	NA	21087167	20963654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.20	chr5	-	4509	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	14	-107	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	67.1548758002723	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087108	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.21	chr5	-	5055	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	1	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	75.5234558765901	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087042	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979283_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21007789_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.22	chr5	-	4565	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-1	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	68.9737268820527	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087077	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987447_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.23	chr5	-	4692	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-16	-107	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	68.5198428057996	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087092	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980843_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.25	chr5	-	4174	15	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-21	-107	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	74.0464898091815	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGTGTTTTTTTAA	NA	False	NA	-9	True	AATAAA	-15	NA	21087097	20963767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.26	chr5	-	4403	16	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	1	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.7695569890057	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087042	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969305_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.27	chr5	-	4675	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	1	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	78.9572473784405	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087042	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20981575_20981643_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.28	chr5	-	4675	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-9	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.7514079179556	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087131	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966722_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.29	chr5	-	5439	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	4	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.629283639196	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087071	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21007424_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.3	chr5	-	4812	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	58.5411457348132	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGCACTTCATAGTTT	NA	False	NA	-5	True	AATAAA	-12	NA	21087129	20963661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.30	chr5	-	4134	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-13	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1807494977135	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087089	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20964098_20964662_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.31	chr5	-	5230	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-1	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	88.7072960640781	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGTGTGTTTTTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	21087077	20963768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999288_20999480_21006899_21007065_21007424_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.32	chr5	-	4596	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	2	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.711976310594	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087120	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966795_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.33	chr5	-	8828	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-19	-109	intron_retention	FALSE	canonical	0	0	junction_6	89.0038622757462	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087095	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20981245_20981361_20987270_20987490_20994626_20994783_20999155_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.34	chr5	-	4297	16	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	2	-109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	76.0977149605836	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087073	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.36	chr5	-	4446	16	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-14	-109	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	76.5266547608667	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087057	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.38	chr5	-	4670	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-14	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	86.3801047194867	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087090	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20981575_20981643_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.39	chr5	-	4933	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	21	-109	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	56.9496833703767	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087101	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018518_21060119_21060200_21086953
ES.25480.4	chr5	-	6374	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	53	junction_8	52.6195068391942	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCAGCACTTCATAGTT	NA	False	NA	-6	True	AATAAA	-11	NA	21087099	20963662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.40	chr5	-	8369	15	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-109	intron_retention	FALSE	canonical	2	5	junction_6	64.8096112801621	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087107	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.41	chr5	-	4664	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	14	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.6652276979381	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087108	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966065_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.42	chr5	-	5415	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-16	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	68.550943348068	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087092	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21007424_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.43	chr5	-	4916	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-12	-109	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	60.2837006783264	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087134	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999119_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.44	chr5	-	4637	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	21	-109	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	80.3900403890308	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087101	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999155_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.45	chr5	-	4525	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-13	-109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	61.0244571872622	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087135	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.46	chr5	-	4174	4	NIC	ENSMUSG00000039987.16	novel	2282	7	NA	NA	1895	-109	intron_retention	FALSE	canonical	3	173	junction_2	29.0631496343164	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	20977216	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20970912_20977172
ES.25480.49	chr5	-	4377	15	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.5758594537392	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087107	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008343_21060166_21060200_21086953
ES.25480.5	chr5	-	4762	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	-27	105	-27	-105	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTGTTTTTTTAAGT	NA	False	NA	-7	True	AATAAA	-17	NA	21087149	20963765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.50	chr5	-	4604	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-15	-109	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	61.9464234237942	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087091	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.51	chr5	-	4415	16	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	10	-109	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	83.1075340882054	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087112	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.53	chr5	-	4533	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	11	-109	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	70.2233045363147	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087064	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.54	chr5	-	4691	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	14	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	65.2370179584469	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087108	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018313_21060119_21060200_21086953
ES.25480.55	chr5	-	3694	12	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	73.1714843070884	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087107	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.56	chr5	-	4710	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-13	-109	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	58.5411457348132	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087135	20963769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.58	chr5	-	4527	20	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-2	-112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.5183179758457	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGACTTGTGTGTGTTTT	NA	False	NA	-14	True	AATAAA	-10	NA	21087124	20963772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20964287_20964370_20965293_20965411_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.59	chr5	-	4081	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	300	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGGCTTTGTCTGATA	NA	False	NA	NA	False	NA	NA	NA	21087107	20964360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.60	chr5	-	3434	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	-12	1418	-12	-418	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCCAAATTTTCC	NA	False	NA	NA	False	AATAAA	-32	NA	21087134	20965078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.61	chr5	-	3546	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-15	-436	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	60.2837006783264	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGATTGCTAGTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	21087091	20965096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999119_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.62	chr5	-	3304	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	3	-436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.4083566253297	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGATTGCTAGTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	21087072	20965096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987440_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.63	chr5	-	3269	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-75	-436	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	67.1548758002723	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGATTGCTAGTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	21087197	20965096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.64	chr5	-	3345	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	13	-438	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCTGATTGCTAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	21087109	20965098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.65	chr5	-	3163	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	19	-439	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	61.0244571872622	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTCTGATTGCTAGT	NA	False	NA	NA	False	AATAAA	-11	NA	21087103	20965099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.66	chr5	-	3357	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	0	-445	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	74.992036614267	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAAGTTGTCTGATT	NA	False	NA	NA	False	AATAAA	-5	NA	21087075	20965105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21045360_21045414_21060119_21060200_21086953
ES.25480.67	chr5	-	3259	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-30	-445	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAAGTTGTCTGATT	NA	False	NA	NA	False	AATAAA	-5	NA	21087152	20965105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.68	chr5	-	3406	19	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-1	-502	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.4311637009052	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCCCATGGTACACTA	NA	False	NA	NA	False	AATAAA	-22	NA	21087123	20965162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20981575_20981643_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.69	chr5	-	3288	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	12	-506	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	58.5411457348132	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTCCCATGGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	21087110	20965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.7	chr5	-	4586	17	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	14	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.5338658248473	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087108	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966050_20969195_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.70	chr5	-	3300	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	13	-653	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	60.2837006783264	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTTTCTTTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	21087062	20965313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999119_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.71	chr5	-	3092	18	NNC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	15	-655	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	66.6397119672096	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGGTTTCTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	21087107	20965315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008315_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.72	chr5	-	3152	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	27	1661	-19	-661	multi-exon	FALSE	canonical	3	159	junction_9	38.2607155309617	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTAAAATGGTTTCT	NA	False	NA	NA	False	AAAACA	-44	NA	21087095	20965321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.73	chr5	-	3046	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-2	-706	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGCTGTTTGCACAGC	NA	False	NA	NA	False	AATAAA	-16	NA	21087078	20965366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.74	chr5	-	5250	10	NNC	ENSMUSG00000039987.16	novel	2044	9	NA	NA	16	-2915	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	80.2889842235803	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21087106	20990300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20991715_20991983_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.75	chr5	-	4976	10	NNC	ENSMUSG00000039987.16	novel	2044	9	NA	NA	-15	-3173	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	80.2889842235803	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTCAAATGAAAACTTCT	NA	False	NA	NA	False	NA	NA	NA	21087091	20990558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20991715_20991984_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.76	chr5	-	4160	9	NNC	ENSMUSG00000039987.16	novel	2044	9	NA	NA	9	2514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.202168097381	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAAAGACTGTAGGTA	NA	False	NA	NA	False	AATAAA	-10	NA	21087113	20991230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20991715_20991984_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.77	chr5	-	3620	9	NNC	ENSMUSG00000039987.16	novel	2044	9	NA	NA	15	1546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	84.717176534632	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATATGATGGTCTTTTC	NA	False	NA	NA	False	AATAAA	-7	NA	21087107	20992198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20994783_20999292_20999480_21006901_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.78	chr5	-	3146	9	FSM	ENSMUSG00000039987.16	ENSMUST00000139325.8	2044	9	32	-1134	0	1134	multi-exon	FALSE	canonical	3	161	junction_1	42.4352447854375	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTTTTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21087043	20992610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.79	chr5	-	2366	7	NIC	ENSMUSG00000039987.16	novel	2000	8	NA	NA	2	449	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	82.7071473466606	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGTGTTATGTGTA	NA	False	NA	1	True	TTTAAA	-16	NA	21087073	20997850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.8	chr5	-	4765	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-75	-106	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087197	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.80	chr5	-	2440	8	FSM	ENSMUSG00000039987.16	ENSMUST00000140147.2	2000	8	-9	-431	-9	431	multi-exon	FALSE	canonical	3	167	junction_2	38.2152870362805	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATGTGTAGTTTAA	NA	False	NA	-17	True	NA	NA	NA	21087085	20997868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.81	chr5	-	2297	7	NIC	ENSMUSG00000039987.16	novel	2000	8	NA	NA	14	431	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	87.7884135609908	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATGTGTAGTTTAA	NA	False	NA	-17	True	NA	NA	NA	21087108	20997868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.82	chr5	-	2695	8	NNC	ENSMUSG00000039987.16	novel	2000	8	NA	NA	5	431	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	84.5526040825642	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATGTGTAGTTTAA	NA	False	NA	-17	True	NA	NA	NA	21087117	20997868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018518_21060119_21060200_21086953
ES.25480.83	chr5	-	2067	7	NIC	ENSMUSG00000039987.16	novel	2000	8	NA	NA	-16	131	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	82.7071473466606	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAATGTACTACAAAA	NA	False	NA	NA	False	NA	NA	NA	21087092	20998168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21086953
ES.25480.84	chr5	-	1919	7	NIC	ENSMUSG00000039987.16	novel	2000	8	NA	NA	13	131	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	87.7884135609908	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAATGTACTACAAAA	NA	False	NA	NA	False	NA	NA	NA	21087030	20998168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25480.85	chr5	-	181	1	Intergenic	novelGene_21234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTACT	NA	False	NA	NA	False	NA	NA	NA	21015100	21014919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21014900_21015100
ES.25480.86	chr5	-	181	1	Intergenic	novelGene_21235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	21039569	21039388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21039400_21039600
ES.25480.87	chr5	-	162	1	Intergenic	novelGene_21237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2685	False	NA	NA	False	NA	NA	NA	21053327	21053165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21053200_21053300
ES.25480.9	chr5	-	4590	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	-22	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087144	20963766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ES.25481.1	chr5	+	986	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	160	1	-156	-1	multi-exon	FALSE	canonical	3	465	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCCACATGCCTCTTA	NA	False	NA	7	True	AATAAA	-17	NA	21087348	21091867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21087654_21091186
ES.25481.2	chr5	+	2896	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	296	-2045	-20	2045	multi-exon	FALSE	canonical	3	465	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTGTTCAAGCAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	21087484	21093913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21087654_21091186
ES.25481.3	chr5	+	2512	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	297	-1662	-19	1662	multi-exon	FALSE	canonical	3	465	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCGAGACAGGGTTTC	NA	False	NA	NA	False	AATAAA	-37	NA	21087485	21093530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21087654_21091186
ES.25481.4	chr5	+	6045	1	FSM	ENSMUSG00000045435.10	ENSMUST00000196723.2	2178	1	-19	-3848	-19	1662	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCGAGACAGGGTTTC	NA	False	NA	NA	False	AATAAA	-37	NA	21087485	21093530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21087500_21093500
ES.25482.1	chr5	+	5083	1	Antisense	novelGene_ENSMUSG00000039968.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGTTTCCTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	21106567	21111650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_21106600_21111600
ES.25483.1	chr5	+	175	1	Intergenic	novelGene_21239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	21138606	21138781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21138600_21138800
ES.25484.1	chr5	+	3012	1	Intergenic	novelGene_21240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCACAGAAAGCCAAACAT	NA	False	NA	NA	False	NA	NA	NA	21140513	21143525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21140500_21143500
ES.25485.1	chr5	+	560	1	Intergenic	novelGene_21242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21148327	21148887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21148300_21148900
ES.25486.1	chr5	+	217	1	Intergenic	novelGene_21243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGTAAAATATATTA	NA	False	NA	NA	False	NA	NA	NA	21150958	21151175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21151000_21151200
ES.25487.1	chr5	-	6281	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	11	-742	11	742	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACAGTCTTGTTCCTG	NA	False	NA	1	True	AATAAA	-23	NA	21156809	21097283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.10	chr5	-	4870	7	NNC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.6269780196281	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTTTTACCTTTGTT	NA	False	NA	-18	True	AATAAA	-18	NA	21156810	21098025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113211_21132617_21132729_21156254
ES.25487.11	chr5	-	4909	7	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	19.9144001499752	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTTTTACCTTTGTT	NA	False	NA	-18	True	AATAAA	-18	NA	21156817	21098025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21132617_21132729_21156254
ES.25487.12	chr5	-	4739	7	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	23	-150	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	19.9144001499752	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGCTTTTTTGAGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	21156797	21098175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21132617_21132729_21156254
ES.25487.13	chr5	-	5395	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	4	151	4	-151	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTGCTTTTTTGAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	21156816	21098176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.14	chr5	-	3343	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	10	2197	10	366	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGATGGTTTTATC	NA	False	NA	NA	False	AATAGA	-20	NA	21156810	21100222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.15	chr5	-	3165	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	-18	2403	-18	160	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGTGTGTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	21156838	21100428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.16	chr5	-	2976	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	11	2563	11	0	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACAATTCAGTTTGTT	NA	False	NA	NA	False	AATAAA	-43	NA	21156809	21100588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.17	chr5	-	2822	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	11	2717	11	-154	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATTTATACCAACTTT	NA	False	NA	NA	False	TATAAA	-13	NA	21156809	21100742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.18	chr5	-	2664	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	-38	2924	-38	-361	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCAGTGCCTGTCCAT	NA	False	NA	NA	False	AATATA	-20	NA	21156858	21100949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.19	chr5	-	157	1	Intergenic	novelGene_21241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	21142749	21142592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21142600_21142700
ES.25487.2	chr5	-	6276	8	NNC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	5	738	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8517308251004	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGGACAGTCTTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	21156815	21097287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21101703_21101797_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.20	chr5	-	1161	1	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	23	-30497	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGTGGCTTCAGAGTGT	NA	False	NA	NA	False	GATAAA	-29	NA	21156797	21155636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21155600_21156800
ES.25487.3	chr5	-	5195	7	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	455	738	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	19.9144001499752	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGGACAGTCTTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	21156365	21097287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21132617_21132729_21156254
ES.25487.4	chr5	-	5592	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	-38	-4	-38	4	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-22	NA	21156858	21098021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.5	chr5	-	5501	8	NNC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18.070158058105	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-22	NA	21156814	21098021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21101703_21101790_21101853_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.7	chr5	-	5428	7	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	-17	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	21.1377755583589	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-22	NA	21156837	21098021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21101703_21101790_21101900_21107285_21107454_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ES.25487.8	chr5	-	5365	7	NNC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.2306031107727	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-22	NA	21156806	21098021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21101703_21101790_21101900_21107285_21107454_21113104_21113211_21124522_21125161_21132617_21132729_21156254
ES.25487.9	chr5	-	4771	6	NIC	ENSMUSG00000039968.10	novel	5550	8	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	27.1411127258998	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTACCTTTGTTTTGT	NA	False	NA	-14	True	AATAAA	-22	NA	21156818	21098021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21101703_21101790_21101900_21107285_21107454_21113104_21113243_21132617_21132729_21156254
ES.25488.1	chr5	+	220	1	Intergenic	novelGene_21244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCCCAGTTAAACACCT	NA	False	NA	NA	False	NA	NA	NA	21171241	21171461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21171200_21171500
ES.25489.1	chr5	-	250	1	Intergenic	novelGene_21245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8867	False	NA	NA	False	NA	NA	NA	21179640	21179390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21179400_21179600
ES.2549.1	chr10	-	4710	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-514	6817	-514	-6817	multi-exon	FALSE	canonical	3	16	junction_4	4.8	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGTTTTCTTGGGAG	NA	False	NA	NA	False	TATAAA	-27	NA	31485694	31376005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ES.2549.2	chr10	-	2924	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-360	8449	-360	-8449	multi-exon	FALSE	canonical	3	16	junction_4	4.8	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTAAACTGTTAATTTA	NA	False	NA	NA	False	AATAAA	-29	NA	31485540	31377637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ES.2549.3	chr10	-	3011	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-692	8694	-692	-8694	multi-exon	FALSE	canonical	3	16	junction_4	4.8	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCCATGGTAACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	31485872	31377882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ES.2549.4	chr10	-	2684	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-558	8887	-558	-8887	multi-exon	FALSE	canonical	3	16	junction_4	4.8	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCATGAGTTACTG	NA	False	NA	NA	False	AAAAAG	-40	NA	31485738	31378075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ES.25490.1	chr5	+	222	1	Intergenic	novelGene_21246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAGAGATAGTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	21181535	21181757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21181500_21181800
ES.25491.1	chr5	+	185	1	Intergenic	novelGene_21247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTGT	3191	False	NA	NA	False	NA	NA	NA	21189573	21189758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21189600_21189800
ES.25491.2	chr5	+	330	1	Intergenic	novelGene_21248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	3191	False	NA	NA	False	NA	NA	NA	21189573	21189903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21189600_21189900
ES.25492.1	chr5	+	176	1	Intergenic	novelGene_21249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCAGAACT	4395	False	NA	NA	False	NA	NA	NA	21225045	21225221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21225000_21225200
ES.25493.1	chr5	+	201	1	Intergenic	novelGene_21250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	21232790	21232991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21232800_21233000
ES.25494.1	chr5	+	895	1	Intergenic	novelGene_21251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATGACTCATCATTAG	NA	False	NA	NA	False	NA	NA	NA	21239384	21240279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21239400_21240300
ES.25495.1	chr5	-	3574	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	-241	-53	-241	53	multi-exon	FALSE	canonical	3	41	junction_17	13.1951023733656	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGCATCTGTGGTG	NA	False	NA	52	True	AAAAAG	-18	NA	21261150	21191589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ES.25495.10	chr5	-	3250	19	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-130	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	19.5887502358489	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATATTGTATTGTTTTT	NA	False	NA	-4	True	ATTAAA	-22	NA	21261039	21191645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646_21260762_21260918
ES.25495.11	chr5	-	3415	18	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-114	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.1422278450164	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACATATTGTATTGTTT	NA	False	NA	-6	True	ATTAAA	-20	NA	21261023	21191647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214609_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ES.25495.2	chr5	-	3362	17	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-145	46	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	18.4483019205021	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATATTTGTGCATC	NA	False	NA	45	True	AAAAAG	-11	NA	21261054	21191596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
ES.25495.3	chr5	-	3238	18	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	445	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	19.3383639002657	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTATTGTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-25	NA	21260278	21191642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260057
ES.25495.4	chr5	-	7947	5	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	1587	0	intron_retention	FALSE	canonical	0	0	junction_4	34.3611335668659	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21204822	21191643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21197925
ES.25495.5	chr5	-	3288	18	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	19.0965494446521	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21260924	21191643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194101_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ES.25495.6	chr5	-	3310	18	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	19.484533836444	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21260859	21191643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220627_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ES.25495.7	chr5	-	3267	19	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	19.5887502358489	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21261080	21191643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646_21260757_21260939
ES.25495.8	chr5	-	3215	18	NNC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	19.5253362154217	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTGTATTGTTTTTT	NA	False	NA	-3	True	ATTAAA	-23	NA	21260857	21191644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234872_21260646
ES.25495.9	chr5	-	3140	16	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-73	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.3907864102276	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTGTATTGTTTTTT	NA	False	NA	-3	True	ATTAAA	-23	NA	21260982	21191644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21192493_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
ES.25496.1	chr5	+	2728	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	9	1051	9	-1051	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACAAAGAGCAAGATAC	NA	False	NA	NA	False	NA	NA	NA	21577648	21582321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21578307_21580251
ES.25496.2	chr5	+	3760	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	28	0	28	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCGATGTGGAAACAGC	NA	False	NA	NA	False	AATAAA	-19	NA	21577667	21583372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21578307_21580251
ES.25496.3	chr5	+	1460	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	65	2263	65	-2263	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGACTCCTATGTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	21577704	21581109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21578307_21580251
ES.25497.1	chr5	+	2447	8	NNC	ENSMUSG00000047221.6	novel	3027	8	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.8586625709852	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTGTCACTGTCCC	NA	False	NA	90	True	AATAAA	-12	NA	21629894	21687121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21629967_21634721_21634832_21638688_21638782_21652313_21652356_21660779_21660876_21664156_21664292_21685129_21685237_21685329
ES.25497.2	chr5	+	2842	7	NIC	ENSMUSG00000047221.6	novel	3027	8	NA	NA	-20	-66	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	19.9534179750961	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAATATTCCATTTCTG	NA	False	NA	25	True	AATAAA	-25	NA	21629935	21687056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21630575_21634721_21634832_21638688_21638782_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ES.25497.3	chr5	+	3064	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	-20	-17	-20	17	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCAGAATTTATATAAGC	NA	False	NA	108	True	AATAAA	-30	NA	21629935	21687139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ES.25497.4	chr5	+	1080	5	ISM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	2	34688	2	12842	5prime_fragment	FALSE	canonical	1	21	junction_1	15.7380907355371	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCTTACATGGTATGC	NA	False	NA	NA	False	ATTAAA	-17	NA	21629957	21652434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313
ES.25497.5	chr5	+	2527	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	355	145	312	-145	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGTTGGTTGGGTTGTGT	NA	False	NA	-54	True	ATTAAA	-21	NA	21630310	21686977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ES.25497.6	chr5	+	2227	7	NNC	ENSMUSG00000047221.6	novel	3027	8	NA	NA	513	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3629956194955	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGAGTCTCCTTTTTA	NA	False	NA	8	True	AATAAA	-8	NA	21630511	21687039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21630553_21634721_21634832_21638688_21638782_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ES.25498.1	chr5	+	158	1	Intergenic	novelGene_21252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	21827632	21827790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21827600_21827800
ES.25499.1	chr5	+	2262	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	-35	-6	31	6	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTGTTTTATTTGTGT	NA	False	NA	12	True	AGTAAA	-32	NA	21850841	21867698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.10	chr5	+	8059	1	NIC	ENSMUSG00000038525.17	novel	1167	6	NA	NA	9	2072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTATAGAAGCCCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21851023	21859082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21851000_21859100
ES.25499.11	chr5	+	4324	5	NIC	ENSMUSG00000038525.17	novel	2221	6	NA	NA	-5	-26	intron_retention	FALSE	canonical	3	325	junction_4	41.4487635521254	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGGAAAAATGCAA	NA	False	NA	-7	True	CATAAA	-15	NA	21851045	21867580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.12	chr5	+	1114	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	169	938	-5	140	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACGATGTTCAAAATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	21851045	21866754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.13	chr5	+	5707	1	NIC	ENSMUSG00000038525.17	novel	2221	6	NA	NA	8363	-26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGGAAAAATGCAA	NA	False	NA	-7	True	CATAAA	-15	NA	21861873	21867580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21861900_21867600
ES.25499.14	chr5	+	3738	2	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	12247	92	9613	-6	3prime_fragment	FALSE	canonical	3	325	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTACATAATTTCTTCCC	NA	False	NA	13	True	AATAAA	-15	NA	21863123	21867600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21865623_21866361
ES.25499.15	chr5	+	4438	1	Genic_Genomic	ENSMUSG00000038525.17	novel	NA	NA	NA	NA	13166	3422	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAACACGCTCCAGAAT	NA	False	NA	NA	False	NA	NA	NA	21866676	21871114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_21866700_21871100
ES.25499.2	chr5	+	2115	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	-6	112	-6	-26	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGGAAAAATGCAA	NA	False	NA	-7	True	CATAAA	-15	NA	21850870	21867580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.3	chr5	+	1077	5	NNC	ENSMUSG00000038525.17	novel	2700	5	NA	NA	4	-4303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.301656953007	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCATTGCTATGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	21851018	21862311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21861910
ES.25499.4	chr5	+	1921	6	FSM	ENSMUSG00000038525.17	ENSMUST00000148873.8	1167	6	212	-966	8	-26	multi-exon	FALSE	canonical	1	1	junction_1	154.901775328755	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGGAAAAATGCAA	NA	False	NA	-7	True	CATAAA	-15	NA	21851022	21867580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21851234_21853659_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.5	chr5	+	449	3	ISM	ENSMUSG00000038525.17	ENSMUST00000095495.3	2700	5	-28	10775	8	-179	5prime_fragment	FALSE	canonical	3	401	junction_2	7	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATAACCTGAGTGTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	21851022	21856831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21851234_21853617_21853767_21856742
ES.25499.6	chr5	+	3588	3	NIC	ENSMUSG00000038525.17	novel	2700	5	NA	NA	8	2072	intron_retention	FALSE	canonical	3	401	junction_1	15	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTATAGAAGCCCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21851022	21859082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21853767_21856742_21856878_21858373
ES.25499.7	chr5	+	1398	3	NNC	ENSMUSG00000038525.17	novel	2700	5	NA	NA	8	1254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.5	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTGGATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	21851022	21854915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21851234_21853617_21853767_21853877
ES.25499.8	chr5	+	994	6	NNC	ENSMUSG00000038525.17	novel	2221	6	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	150.245665494882	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGTTGCTCCTATTTTTA	NA	False	NA	3	True	AATAAA	-13	NA	21851023	21866615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21851234_21853620_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ES.25499.9	chr5	+	1177	4	ISM	ENSMUSG00000038525.17	ENSMUST00000095495.3	2700	5	-27	8550	9	2046	5prime_fragment	FALSE	canonical	3	401	junction_2	12.2565175405668	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21851023	21859056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373
ES.255.1	chr1	+	4091	2	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTATGGTGGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35813573	35820843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_35815401_35818579
ES.2550.1	chr10	+	4532	1	Intergenic	novelGene_1933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	31626298	31630830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_31626300_31630800
ES.25500.1	chr5	+	755	1	Antisense	novelGene_ENSMUSG00000044968.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTCAGCAGTTGA	NA	False	NA	NA	False	AATAAA	-32	NA	21880944	21881699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_21880900_21881700
ES.25501.1	chr5	+	158	1	Intergenic	novelGene_21253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATAAATAAATCTTTA	9079	False	NA	NA	False	NA	NA	NA	21910669	21910827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_21910700_21910800
ES.25502.1	chr5	-	4047	5	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	4	281	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	51.0710289694657	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTATGTACACCTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	21906388	21867617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906156
ES.25502.10	chr5	-	3263	4	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	24995	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.3127305053477	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTACTTGAAAAGATAC	NA	False	NA	NA	False	AATAAA	-12	NA	21881397	21867905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21881351
ES.25502.12	chr5	-	1702	6	NNC	ENSMUSG00000044968.17	novel	3724	5	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5760401704046	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTACTTGAAAAGATAC	NA	False	NA	NA	False	AATAAA	-12	NA	21906386	21867905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21868135_21870143_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ES.25502.14	chr5	-	3750	6	NNC	ENSMUSG00000044968.17	novel	3724	5	NA	NA	19	-70	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	58.9216428827303	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTCTTGTTAGTCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	21906373	21867970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21887225_21887343_21888153_21888464_21906202
ES.25502.15	chr5	-	2596	3	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	28055	-77	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	64	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTACTCTTGTT	NA	False	NA	NA	False	AATAAA	-6	NA	21878337	21867977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21878239
ES.25502.18	chr5	-	3786	7	NNC	ENSMUSG00000044968.17	novel	3724	5	NA	NA	37	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.2180773614878	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATTGAATGGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	21906355	21868054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21894807_21895010_21895112_21895166_21906202
ES.25502.2	chr5	-	4262	5	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	-478	210	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.6920851810221	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTATGTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	21906872	21867688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906354
ES.25502.20	chr5	-	1670	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	17	2037	15	-2037	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAAGTTCCATTTCTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	21906377	21869937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ES.25502.21	chr5	-	642	3	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	28048	-2038	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	64	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAAAGTTCCATTTCTT	NA	False	NA	NA	False	AGTAAA	-24	NA	21878344	21869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21878239
ES.25502.22	chr5	-	854	4	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	25772	-2040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.7401153701776	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTAAAGTTCCATTTC	NA	False	NA	NA	False	AGTAAA	-22	NA	21880620	21869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21870528_21870680_21875486_21875602_21880452
ES.25502.23	chr5	-	1504	5	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	17508	-2048	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	50.6920851810221	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAACTGACATTAAAGT	NA	False	NA	NA	False	AGTAAA	-14	NA	21888884	21869948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21888864
ES.25502.25	chr5	-	1491	5	NNC	ENSMUSG00000044968.17	novel	3954	5	NA	NA	18	-2259	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	51.0710289694657	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAATTTCTGCAAGTGT	NA	False	NA	NA	False	AAGAAA	-30	NA	21906374	21870159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906156
ES.25502.26	chr5	-	2792	3	ISM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	43	10866	41	-10866	5prime_fragment	FALSE	canonical	3	17	junction_2	25	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCACATGTAAGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	21906351	21878766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_21881100_21888153_21888464_21906202
ES.25502.3	chr5	-	4157	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	-2	-201	0	201	multi-exon	FALSE	canonical	3	8	junction_4	48.8108594474631	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTAAAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	21906394	21867697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
ES.25502.7	chr5	-	3732	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	-6	-2	-6	0	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	21906400	21867898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ES.25503.1	chr5	+	1635	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	-19	-1	-19	1	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTAGTCTGTTATATGTA	NA	False	NA	17	True	AATAAA	-19	NA	21942119	21962151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.10	chr5	+	4102	12	FSM	ENSMUSG00000029017.14	ENSMUST00000125693.8	4134	12	28	4	28	2	multi-exon	FALSE	canonical	3	306	junction_5	34.0400833243292	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCGTTAGTCTGTTAT	NA	False	NA	12	True	AATAAA	-14	NA	21942166	21962146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.11	chr5	+	3721	12	NIC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	31	0	intron_retention	FALSE	canonical	3	306	junction_4	35.3373353937061	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGCGTTAGTCTGTT	NA	False	NA	10	True	AATAAA	-12	NA	21942169	21962144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.13	chr5	+	3720	12	NNC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	36	0	intron_retention	FALSE	canonical	0	0	junction_6	113.188718300073	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGCGTTAGTCTGTT	NA	False	NA	10	True	AATAAA	-12	NA	21942174	21962144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21949717_21950975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.15	chr5	+	1608	13	NNC	ENSMUSG00000029017.14	novel	400	3	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	101.767163444579	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGCGTTAGTCTGTT	NA	False	NA	10	True	AATAAA	-12	NA	21942275	21962144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21942411_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.16	chr5	+	3861	6	NIC	ENSMUSG00000029017.14	novel	4134	12	NA	NA	1102	2	intron_retention	FALSE	canonical	3	348	junction_1	18.5321342537766	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCGTTAGTCTGTTAT	NA	False	NA	12	True	AATAAA	-14	NA	21948839	21962146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.2	chr5	+	1671	12	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	6	27	6	-21	intron_retention	FALSE	canonical	3	306	junction_5	35.0817227730805	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAATATATTTG	NA	False	NA	-11	True	TATAAA	-43	NA	21942144	21962123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812
ES.25503.3	chr5	+	1692	14	NNC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	137.284397937857	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTTGCGTTAGTCTGT	NA	False	NA	9	True	AATAAA	-11	NA	21942148	21962143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21955274_21955369_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25503.7	chr5	+	3744	12	NIC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	23	-2	intron_retention	FALSE	canonical	1	2	junction_10	110.361614479008	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGCGTTAGTCTG	NA	False	NA	8	True	AATAAA	-10	NA	21942161	21962142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961795_21961889_21961977
ES.25503.9	chr5	+	1558	13	NNC	ENSMUSG00000029017.14	novel	1615	13	NA	NA	24	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.274599463073	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAAAAAATAAAAATAT	NA	False	NA	-16	True	TATAAA	-38	NA	21942162	21962118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21942275_21943866_21944008_21945037_21945119_21945477_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ES.25504.1	chr5	-	157	1	Intergenic	novelGene_21254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	21946264	21946107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21946100_21946300
ES.25505.1	chr5	-	3376	1	FSM	ENSMUSG00000083006.2	ENSMUST00000118032.2	283	1	-1120	-1973	-1120	1973	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGTAAGATTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	21954631	21951255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21951300_21954600
ES.25506.1	chr5	-	205	1	Intergenic	novelGene_21255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGAAGTAGGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	21958163	21957958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21958000_21958200
ES.25507.1	chr5	+	1643	13	NNC	ENSMUSG00000028932.9	novel	3466	2	NA	NA	-1018	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	661.702454951536	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	20	True	AATAAA	-16	NA	21989262	22008784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21989361_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006209_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ES.25507.10	chr5	+	2968	10	NIC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1480	-3	intron_retention	FALSE	canonical	3	1482	junction_7	131.657805609002	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGTGCTTCCAGATCT	NA	False	NA	18	True	AATAAA	-14	NA	21991760	22008782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22005007_22005541_22005638_22006205_22007612_22008067_22008271_22008363_22008461_22008544
ES.25507.11	chr5	+	1213	11	NNC	ENSMUSG00000028932.9	novel	1775	13	NA	NA	1483	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	538.183249460628	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGATTTAAAAA	NA	False	NA	-4	True	NA	NA	NA	21991763	22008760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008172_22008544
ES.25507.13	chr5	+	3212	8	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1490	1	1490	-1	intron_retention	FALSE	canonical	3	1703	junction_4	66.7122973090037	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	20	True	AATAAA	-16	NA	21991770	22008784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205
ES.25507.14	chr5	+	1415	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1493	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	522.802318723636	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGCTTCCAGATCTC	NA	False	NA	19	True	AATAAA	-15	NA	21991773	22008783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21991876_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ES.25507.15	chr5	+	1283	11	NIC	ENSMUSG00000028932.9	novel	1775	13	NA	NA	1512	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	538.183249460628	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGATTTAAAAA	NA	False	NA	-4	True	NA	NA	NA	21991792	22008760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008544
ES.25507.4	chr5	+	1506	13	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1464	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	660.779442947662	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAGTGCTTCCAGATC	NA	False	NA	17	True	AATAAA	-13	NA	21991744	22008781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21991883_21992049_21992107_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ES.25507.5	chr5	+	1351	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1466	-1	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_10	474.994371432507	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	20	True	AATAAA	-16	NA	21991746	22008784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008172_22008363_22008461_22008544
ES.25507.8	chr5	+	3059	10	NIC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1466	-1	intron_retention	FALSE	canonical	3	1703	junction_4	77.2294960603032	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTCCAGATCTCT	NA	False	NA	20	True	AATAAA	-16	NA	21991746	22008784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22008271_22008363_22008461_22008544
ES.25507.9	chr5	+	1440	12	NNC	ENSMUSG00000028932.9	novel	1775	13	NA	NA	1468	-15	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	525.671565753106	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGATTTAAAAA	NA	False	NA	-4	True	NA	NA	NA	21991748	22008760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004404_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ES.25508.1	chr5	-	3857	16	FSM	ENSMUSG00000029014.15	ENSMUST00000132962.8	3758	16	-82	-17	-1	3	multi-exon	FALSE	canonical	3	849	junction_10	94.8326244847556	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTCATCATTTAAAAG	NA	False	NA	6	True	AATAAA	-33	NA	21990250	21962261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.10	chr5	-	4564	15	NIC	ENSMUSG00000029014.15	novel	3758	16	NA	NA	-4	4	intron_retention	FALSE	canonical	3	849	junction_9	96.8952727306705	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACTTGGAATTATAGT	NA	False	NA	-7	True	AATAAA	-20	NA	21990156	21962274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.11	chr5	-	2016	16	NNC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	355.618609686776	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCACTTGGAATTATAG	NA	False	NA	-8	True	AATAAA	-19	NA	21990234	21962275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980068_21981727_21981875_21988101_21988236_21989986
ES.25508.13	chr5	-	1165	10	NNC	ENSMUSG00000029014.15	novel	2416	16	NA	NA	9	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	308.731974532547	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCACTTGGAATTATAG	NA	False	NA	-8	True	AATAAA	-19	NA	21990240	21962275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21962377_21973493_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.15	chr5	-	2367	16	FSM	ENSMUSG00000029014.15	ENSMUST00000115193.8	2416	16	41	8	11	1	multi-exon	FALSE	canonical	3	849	junction_10	94.8316871561868	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCACTTGGAATTAT	NA	False	NA	-10	True	AATAAA	-17	NA	21990141	21962277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.16	chr5	-	1910	17	FSM	ENSMUSG00000029014.15	ENSMUST00000115195.8	1994	17	86	-2	24	1	multi-exon	FALSE	canonical	2	12	junction_16	257.325297228527	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCACTTGGAATTAT	NA	False	NA	-10	True	AATAAA	-17	NA	21990128	21962277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988147_21989986
ES.25508.18	chr5	-	4507	15	NIC	ENSMUSG00000029014.15	novel	1994	17	NA	NA	-8	1	intron_retention	FALSE	canonical	2	12	junction_14	272.483186150437	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCACTTGGAATTAT	NA	False	NA	-10	True	AATAAA	-17	NA	21990191	21962277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988147_21989986
ES.25508.2	chr5	-	2156	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	-21	-2	-21	2	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGTCATCATTTAAAA	NA	False	NA	5	True	AATAAA	-32	NA	21990270	21962262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.20	chr5	-	2030	17	NNC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	260.041034922856	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATTTTCACTTGGAAT	NA	False	NA	-13	True	AATAAA	-14	NA	21990179	21962280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21990003
ES.25508.21	chr5	-	4601	15	NNC	ENSMUSG00000029014.15	novel	3758	16	NA	NA	-1	-10	intron_retention	TRUE	non_canonical	0	0	junction_6	275.725656686319	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTGTACACATTTTC	NA	False	NA	-22	True	AATAAA	-5	NA	21990215	21962289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21968514_21968738_21968828_21971553_21971697_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.22	chr5	-	1595	13	NNC	ENSMUSG00000029014.15	novel	3758	16	NA	NA	-13	3337	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	279.47579899201	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAATGTGCATGTTTTA	NA	False	NA	NA	False	AATACA	-21	NA	21990227	21968078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21968255_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.23	chr5	-	1060	6	FSM	ENSMUSG00000029014.15	ENSMUST00000147987.2	1011	6	-50	1	12	-1	multi-exon	FALSE	canonical	3	855	junction_1	59.5449410109709	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCATTGAGCCATCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	21990202	21978520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.6	chr5	-	2129	17	NNC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	259.583914358633	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGGAATTATAGTCAT	NA	False	NA	-4	True	AATAAA	-23	NA	21990231	21962271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973578_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25508.8	chr5	-	3691	16	NIC	ENSMUSG00000029014.15	novel	1994	17	NA	NA	0	-2	intron_retention	FALSE	canonical	2	12	junction_15	265.314957487637	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGGAATTATAGTCAT	NA	False	NA	-4	True	AATAAA	-23	NA	21990183	21962271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988147_21989986
ES.25508.9	chr5	-	2033	16	NIC	ENSMUSG00000029014.15	novel	2133	17	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	266.688749085688	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTGGAATTATAGTCA	NA	False	NA	-5	True	AATAAA	-22	NA	21990238	21962272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ES.25509.1	chr5	-	2168	1	Intergenic	novelGene_21256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGTGGGGGGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	21997741	21995573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_21995600_21997700
ES.2551.1	chr10	+	181	1	Intergenic	novelGene_1934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	32410513	32410694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_32410500_32410700
ES.25510.1	chr5	+	194	1	Intergenic	novelGene_21257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCTTTCACTATTTTG	NA	False	NA	NA	False	NA	NA	NA	22056391	22056585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_22056400_22056600
ES.25511.1	chr5	-	157	1	Intergenic	novelGene_21258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	22175265	22175108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_22175100_22175300
ES.25512.1	chr5	-	202	1	Intergenic	novelGene_21259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATCATATTAACTATCAT	NA	False	NA	NA	False	NA	NA	NA	22241244	22241042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_22241000_22241200
ES.25513.1	chr5	-	877	1	Intergenic	novelGene_21260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGATTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	22677657	22676780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_22676800_22677700
ES.25514.1	chr5	+	182	1	Intergenic	novelGene_21261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22736607	22736789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_22736600_22736800
ES.25515.1	chr5	+	2871	4	NNC	ENSMUSG00000097207.8	novel	2380	5	NA	NA	-24	51112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTGTCTCATGTCATGG	9181	False	NA	NA	False	NA	NA	NA	22755405	22814280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_22755471_22758756_22758802_22787400_22787481_22811599
ES.25515.2	chr5	+	4277	1	FSM	ENSMUSG00000105156.2	ENSMUST00000198791.2	296	1	-3084	-897	-3084	897	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTTTTTCAGTTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	22765870	22770147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_22765900_22770100
ES.25516.1	chr5	-	8711	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	18	-6626	18	6622	multi-exon	TRUE	canonical	3	527	junction_10	41.6678895284064	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATTTAGCATGGAATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	22755355	22684860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.10	chr5	-	3692	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-2562	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	160.935063533576	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTGTGTTCTTTGGTT	NA	False	NA	-6	True	AATAAA	-15	NA	22757989	22691485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22756217
ES.25516.11	chr5	-	2172	15	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	210.114546019498	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTGTGTTCTTTGGTT	NA	False	NA	-6	True	AATAAA	-15	NA	22755308	22691485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22740469_22740603_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.12	chr5	-	6339	2	NNC	ENSMUSG00000029012.12	novel	2117	13	NA	NA	29549	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTGTGTTCTTTGGTT	NA	False	NA	-6	True	AATAAA	-15	NA	22698115	22691485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22697580_22697870
ES.25516.13	chr5	-	2084	13	NIC	ENSMUSG00000029012.12	novel	2117	13	NA	NA	5	-1	intron_retention	FALSE	canonical	3	46	junction_11	156.615306297522	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTAGCTGTGTTCTTTGG	NA	False	NA	-8	True	AATAAA	-13	NA	22755368	22691487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
ES.25516.14	chr5	-	2037	13	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	165.667588863966	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTAGCTGTGTTCTTTGG	NA	False	NA	-8	True	AATAAA	-13	NA	22755356	22691487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.15	chr5	-	1884	13	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	165.978642367692	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTAGCTGTGTTCTTTGG	NA	False	NA	-8	True	AATAAA	-13	NA	22755356	22691487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22752921_22753015_22755189
ES.25516.17	chr5	-	2193	15	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.267413290765	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTAGCTGTGTTCTTTG	NA	False	NA	-9	True	AATAAA	-12	NA	22755379	22691488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704330_22704417_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.18	chr5	-	2206	15	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	207.195806040606	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTAGCTGTGTTCTTT	NA	False	NA	-10	True	AATAAA	-11	NA	22755382	22691489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22754928_22755026_22755189
ES.25516.19	chr5	-	1945	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	18	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	160.935063533576	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCTTACATTAGCTGT	NA	False	NA	-17	True	AATAAA	-4	NA	22755355	22691496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755319
ES.25516.2	chr5	-	2234	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	7	-138	7	134	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTCATTCCATTTTAT	NA	False	NA	NA	False	TTTAAA	-41	NA	22755366	22691348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.20	chr5	-	1785	13	FSM	ENSMUSG00000029012.12	ENSMUST00000135906.8	2117	13	-52	384	19	-380	multi-exon	FALSE	canonical	3	527	junction_9	41.555434863164	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTAGGACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	22755354	22691866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.21	chr5	-	1686	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	37	380	-34	-380	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTTAGGACTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	22755336	22691866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.22	chr5	-	1836	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	18	-435	intron_retention	FALSE	canonical	0	0	junction_2	215.563442246444	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTGTTCTACTCTTAA	NA	False	NA	NA	False	TATAAA	-16	NA	22755355	22691921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22719828_22719934_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.23	chr5	-	1894	1	FSM	ENSMUSG00000029012.12	ENSMUST00000199943.2	3742	1	1841	7	1841	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22725823	22723929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22723900_22725800
ES.25516.24	chr5	-	2196	11	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	7	34849	7	2178	5prime_fragment	FALSE	canonical	3	527	junction_7	38.0132871506793	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGGTGGTTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	22755366	22726335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.25	chr5	-	2823	7	Fusion	ENSMUSG00000084235.3_ENSMUSG00000029012.12	novel	645	4	NA	NA	-34	1689	multi-exon	FALSE	canonical	1	82	junction_1	190.485928322511	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATAATTGTTTCCTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	22755336	22731629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_22733694_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.26	chr5	-	481	1	FSM	ENSMUSG00000084235.3	ENSMUST00000118224.2	399	1	4	-86	4	86	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTCCTAGAA	NA	False	NA	-11	True	AATAAA	-17	NA	22733713	22733232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22733200_22733700
ES.25516.3	chr5	-	2100	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	7	-4	7	0	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755366	22691482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.4	chr5	-	2170	13	FSM	ENSMUSG00000029012.12	ENSMUST00000135906.8	2117	13	-53	0	18	0	multi-exon	FALSE	canonical	3	527	junction_9	41.555434863164	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755355	22691482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.5	chr5	-	2025	14	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	150.475380832502	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755385	22691482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
ES.25516.6	chr5	-	3300	10	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	14755	-4	-12954	0	3prime_fragment	FALSE	canonical	3	546	junction_7	34.1915446915617	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22740618	22691482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760
ES.25516.8	chr5	-	4246	13	NNC	ENSMUSG00000029012.12	novel	2117	13	NA	NA	7	0	intron_retention	TRUE	non_canonical	0	0	junction_7	168.917858900578	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755366	22691482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22733215_22733720_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ES.25516.9	chr5	-	2249	15	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	208.053723929221	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTTCTTTGGTTC	NA	False	NA	-5	True	AATAAA	-16	NA	22755374	22691484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22754882_22755026_22755189
ES.25517.1	chr5	-	664	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-72	-37	-72	37	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	AATAAA	-37	NA	22818252	22817588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_22817600_22818300
ES.25518.1	chr5	+	188	1	Intergenic	novelGene_21262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGATAAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	22819761	22819949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_22819800_22819900
ES.25519.1	chr5	+	178	1	Intergenic	novelGene_21263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATGCAAACC	NA	False	NA	NA	False	NA	NA	NA	23277773	23277951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_23277800_23278000
ES.2552.1	chr10	-	181	1	Intergenic	novelGene_1935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTTCCTGATGCTA	NA	False	NA	NA	False	NA	NA	NA	32680281	32680100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_32680100_32680300
ES.25520.1	chr5	+	5213	1	Intergenic	novelGene_21264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATACAGAAGAACACTGC	NA	False	NA	NA	False	NA	NA	NA	23555722	23560935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_23555700_23560900
ES.25521.1	chr5	-	3822	1	Intergenic	novelGene_21265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	3464	False	NA	NA	False	NA	NA	NA	23613098	23609276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23609300_23613100
ES.25522.1	chr5	+	3578	1	Genic_Genomic	ENSMUSG00000029004.16	novel	NA	NA	NA	NA	-1312	-48745	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGTTTTATGCCATC	NA	False	NA	NA	False	AATAAA	-21	NA	23638126	23641704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_23638100_23641700
ES.25522.10	chr5	+	177	1	Intergenic	novelGene_21267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAAGA	2118	False	NA	NA	False	NA	NA	NA	23678239	23678416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_23678200_23678400
ES.25522.2	chr5	+	2646	1	Genic_Genomic	ENSMUSG00000029004.16	novel	NA	NA	NA	NA	-944	-49309	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATAAGACATTTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	23638494	23641140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_23638500_23641100
ES.25522.3	chr5	+	2643	13	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	-704	18765	-704	19	5prime_fragment	FALSE	canonical	3	18	junction_10	3.30298686376774	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGATACTTCAAAAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	23638734	23690468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344
ES.25522.4	chr5	+	4695	24	NIC	ENSMUSG00000029004.16	novel	7252	26	NA	NA	-8	684	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	7.54670398391205	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGTTTAATGAACAATT	NA	False	NA	NA	False	AGTAAA	-18	NA	23639430	23706212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23701401_23701547_23701969_23702221_23702536_23702594_23702725_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724
ES.25522.5	chr5	+	4949	24	NIC	ENSMUSG00000029004.16	novel	7252	26	NA	NA	2	956	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	7.54670398391205	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTCTCTCATACTTCT	NA	False	NA	NA	False	ATTAAA	-7	NA	23639448	23706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23701401_23701547_23701969_23702221_23702536_23702594_23702725_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724
ES.25522.6	chr5	+	1118	7	ISM	ENSMUSG00000029004.16	ENSMUST00000196889.5	2061	13	23	12792	15	-11843	5prime_fragment	FALSE	canonical	3	20	junction_1	3.28718048721934	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGGGGAGAAAGA	NA	False	NA	NA	False	GATAAA	-7	NA	23639461	23678606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478
ES.25522.7	chr5	+	2827	16	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	25	10529	17	-2502	5prime_fragment	FALSE	canonical	3	18	junction_10	3.53396220818629	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTAGTTCATGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	23639463	23698704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
ES.25522.8	chr5	+	5181	25	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	41	2741	33	964	5prime_fragment	FALSE	canonical	2	2	junction_16	7.81691541892751	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATACTTCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	23639479	23706492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23700983_23701239_23701401_23701547_23701969_23702221_23702536_23702594_23702725_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724
ES.25522.9	chr5	+	2842	17	ISM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	75	10529	75	-2502	5prime_fragment	FALSE	canonical	0	0	junction_1	8.41872912024137	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGTAGTTCATGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	23639521	23698704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23639782_23651523_23651597_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
ES.25523.1	chr5	+	982	1	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	68498	315	4670	-315	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTAGCTGCTACCTCAG	NA	False	NA	110	True	AGTAAA	-16	NA	23707936	23708918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_23707900_23708900
ES.25524.1	chr5	+	3559	1	Intergenic	novelGene_21268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCACAATGCCCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	23870632	23874191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_23870600_23874200
ES.25525.1	chr5	-	726	2	NIC	ENSMUSG00000073147.4	novel	719	3	NA	NA	-3	97	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	23638337	23627304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23627901_23638207
ES.25525.2	chr5	-	7679	2	NNC	ENSMUSG00000073147.4	novel	719	3	NA	NA	2654	96	intron_retention	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTGGGGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	23635653	23627305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23630308_23630976
ES.25525.3	chr5	-	2058	1	NIC	ENSMUSG00000073147.4	novel	719	3	NA	NA	8634	-214	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	23629673	23627615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23627600_23629700
ES.25525.4	chr5	-	1374	1	FSM	ENSMUSG00000073147.4	ENSMUST00000189045.2	1983	1	615	-6	265	6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTCGTTAAAGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	23638652	23637278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23637300_23638700
ES.25526.1	chr5	-	240	1	Intergenic	novelGene_21266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTACCAT	NA	False	NA	NA	False	AAAAAG	-41	NA	23655910	23655670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23655700_23655900
ES.25527.1	chr5	-	3708	18	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	7	19958	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.4864239379592	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGTAGGCAATTAATTAA	NA	False	NA	NA	False	NA	NA	NA	23881005	23688303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23688342_23688635_23688692_23711135_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.10	chr5	-	5333	14	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	15	-1088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	115.271688328824	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATTTGACGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	23880997	23709349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730489_23730744_23732876_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880855
ES.25527.11	chr5	-	5438	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-16	-1090	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATTCTATTTGACGTA	NA	False	NA	NA	False	AATAAA	-17	NA	23880981	23709351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.12	chr5	-	4749	11	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-3437	1092	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	84.4994674539432	362	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTCTTCATTCTATTT	NA	False	NA	NA	False	AATAAA	-11	NA	23750553	23709357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730527_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520
ES.25527.13	chr5	-	5421	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-14	1091	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	102.404860995734	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCTCTTCATTCTATT	NA	False	NA	NA	False	AATAAA	-10	NA	23880979	23709358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23732876_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.14	chr5	-	5305	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-10	916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	98.7344726716561	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGAGTTTGCTGTTTT	NA	False	NA	2	True	ATTAAA	-36	NA	23880975	23709533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23834329_23834476_23880717_23880773_23880855
ES.25527.15	chr5	-	5207	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	14	914	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTGAGTTTGCTGTT	NA	False	NA	0	True	ATTAAA	-34	NA	23880998	23709535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.16	chr5	-	5290	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	21	911	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	88.2397302806395	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23880991	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.17	chr5	-	5242	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	13	911	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_15	90.8021329251136	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23880999	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.18	chr5	-	5205	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-9	911	combination_of_known_junctions	FALSE	canonical	1	9	junction_15	70.0521710346415	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23881455	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23881311
ES.25527.19	chr5	-	5173	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	18	911	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	370	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23880994	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.2	chr5	-	187	1	Genic_Genomic	ENSMUSG00000062604.12	novel	NA	NA	NA	NA	38677	9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCATAAGGAAGTGTA	4431	False	NA	NA	False	AATAAA	-25	NA	23708439	23708252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_23708300_23708400
ES.25527.20	chr5	-	5503	1	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	32075	911	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23715041	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23709500_23715000
ES.25527.21	chr5	-	3567	5	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	17863	911	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	121.584075848772	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTCTTGAGTTTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	23729253	23709538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23719631_23719702_23723413_23723522_23723616_23723718_23729145
ES.25527.22	chr5	-	7141	12	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-11	908	intron_retention	FALSE	canonical	0	0	junction_1	79.769502654329	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAATTTCTTGAGTTT	NA	False	NA	-6	True	ATTAAA	-28	NA	23880976	23709541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.23	chr5	-	5244	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-12	908	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAATTTCTTGAGTTT	NA	False	NA	-6	True	ATTAAA	-28	NA	23880977	23709541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.24	chr5	-	4729	12	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	2316	908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	80.962495143336	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTAATTTCTTGAGTTT	NA	False	NA	-6	True	ATTAAA	-28	NA	23752052	23709541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729608_23730487_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977
ES.25527.26	chr5	-	4850	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	1	591	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTCAGTTTGCAGAAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	23880964	23709858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.27	chr5	-	4290	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	18	1	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGTGCACTCCTTT	NA	False	NA	NA	False	NA	NA	NA	23880994	23710448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.28	chr5	-	4248	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCACTCCTT	NA	False	NA	NA	False	NA	NA	NA	23880980	23710449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.29	chr5	-	4315	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGGTGTGGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	23880961	23710454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.3	chr5	-	6333	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-7	-95	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	372	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAACAATGAAATTTAAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	23880972	23708356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.30	chr5	-	4705	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	20	-686	intron_retention	FALSE	canonical	0	0	junction_8	102.002091481825	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGCTTATTACCCTG	NA	False	NA	-1	True	ATTAAA	-26	NA	23880945	23711135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23731814_23732921_23733061_23744492_23744627_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.31	chr5	-	3579	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	15	-686	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGCTTATTACCCTG	NA	False	NA	-1	True	ATTAAA	-26	NA	23880997	23711135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.32	chr5	-	3694	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	18	-688	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	88.2397302806395	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880994	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.33	chr5	-	3619	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-10	-688	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_15	90.8021329251136	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880975	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.34	chr5	-	8546	7	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	16589	-688	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	107.172757732551	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23730527	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23717324_23717463_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493
ES.25527.35	chr5	-	3456	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	20	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.4485627958442	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880945	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729239_23729334_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.36	chr5	-	3612	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	7	-688	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23881005	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.37	chr5	-	3455	15	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-3	-688	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	85.7361876779637	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23880968	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.38	chr5	-	3782	18	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-6	-688	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	106.813228319083	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23881018	23711137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.39	chr5	-	5714	14	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-18	-689	intron_retention	FALSE	canonical	3	228	junction_12	24.5901312768561	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880983	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.4	chr5	-	5934	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	12	-502	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATGTGACAGCGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	23880953	23708763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.40	chr5	-	3704	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-2	-689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	120.54330134852	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880967	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.41	chr5	-	3667	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	17	-689	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	96.322050954078	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880995	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.42	chr5	-	3527	15	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-11	-689	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	74.4824660917054	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880976	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880855
ES.25527.43	chr5	-	4033	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-689	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	69.400736467434	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880965	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.44	chr5	-	3485	15	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	4	-689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	86.3259426090844	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880961	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880855
ES.25527.45	chr5	-	3181	12	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-7	-689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.385322107505	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880972	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719038_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23770111_23770264_23880717_23880773_23880855
ES.25527.46	chr5	-	3583	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-1	-689	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	102.260104091913	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTTGCTTATTACC	NA	False	NA	-4	True	ATTAAA	-23	NA	23880966	23711138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.49	chr5	-	3589	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-10	-690	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	88.4312664666117	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23880975	23711139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880855
ES.25527.5	chr5	-	2655	1	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	109860	756	35444	-756	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCTTCTAAAGGAAAGGC	1198	False	NA	NA	False	NA	NA	NA	23711672	23709017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_23709000_23711700
ES.25527.51	chr5	-	3570	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	18	-690	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	101.310611487642	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23880994	23711139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.53	chr5	-	3741	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	12	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	115.212236220811	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880953	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23834329_23834476_23880855
ES.25527.54	chr5	-	3552	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-10	-691	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	100.243348352342	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880975	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718487_23718581_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.56	chr5	-	3659	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	21	-691	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880991	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.59	chr5	-	3530	18	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-23	-691	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	96.8048727647708	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880988	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729425_23729550_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.6	chr5	-	5428	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	20	-973	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	371	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGATTAGTGGAGCTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	23880945	23709234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.60	chr5	-	3404	15	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-10	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.412116408477	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880975	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729141_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23880717_23880773_23880855
ES.25527.61	chr5	-	3836	18	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	3	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	108.615285649933	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23880962	23711140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745502_23746106_23746277_23750506_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.62	chr5	-	4049	19	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	0	-693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	116.860579588364	367	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACATTGCCTTGCTTAT	NA	False	NA	-8	True	ATTAAA	-19	NA	23880965	23711142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23769354_23769627_23770111_23770264_23821324_23821389_23834329_23834476_23880717_23880773_23880855
ES.25527.63	chr5	-	4163	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-11	-693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7529762659615	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACATTGCCTTGCTTAT	NA	False	NA	-8	True	ATTAAA	-19	NA	23880976	23711142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718364_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.65	chr5	-	5570	14	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	17	-848	intron_retention	FALSE	non_canonical	0	0	junction_10	76.0581372154643	367	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCCTCGTTTTTCTTG	NA	False	NA	NA	False	TTTAAA	-15	NA	23880995	23711297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23733061_23745372_23745480_23750520_23750609_23751977_23752069_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.66	chr5	-	2887	15	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-11	-1232	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	74.3247493594626	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCAGTGTGTGGAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	23880976	23711681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23880717_23880773_23880855
ES.25527.67	chr5	-	3011	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	-10	-1232	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	364	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCAGTGTGTGGAATG	NA	False	NA	NA	False	ATTAAA	-15	NA	23880975	23711681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.68	chr5	-	3162	17	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	8	-1236	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	90.8420461226518	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGTTCAGTGTGTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	23880957	23711685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23834329_23834476_23880717_23880773_23880855
ES.25527.69	chr5	-	2733	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	17	-1557	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	361	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTACCCAGTCCTGAG	NA	False	NA	NA	False	CATAAA	-25	NA	23880995	23712006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.7	chr5	-	5320	15	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	13	-1080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	86.3259426090844	371	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGACGTATTTCAGAATA	NA	False	NA	NA	False	AATAAA	-27	NA	23880999	23709341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880855
ES.25527.70	chr5	-	3592	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	13	-1828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	91.5373685647015	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTTGTGTGACATTC	NA	False	NA	-1	True	NA	NA	NA	23880952	23712277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745576_23746106_23746274_23749610_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.71	chr5	-	2462	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	15	-1830	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTTGTGTGACAT	NA	False	NA	-3	True	NA	NA	NA	23880997	23712279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.72	chr5	-	2431	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	18	-1831	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	359	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGTGTTGTGTGACA	NA	False	NA	-4	True	NA	NA	NA	23880994	23712280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.73	chr5	-	2982	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	29	-1834	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7529762659615	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTCTTGTGTTGTGTG	NA	False	NA	-7	True	NA	NA	NA	23880936	23712283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718364_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.74	chr5	-	2494	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	-4	-1834	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTCTTGTGTTGTGTG	NA	False	NA	-7	True	NA	NA	NA	23880969	23712283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
ES.25527.75	chr5	-	2125	15	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	1	-2052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	86.3259426090844	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTCCCAGTACATTG	NA	False	NA	NA	False	AATATA	-16	NA	23880964	23712501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880855
ES.25527.76	chr5	-	6328	16	NNC	ENSMUSG00000062604.12	novel	946	9	NA	NA	8	-3978	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.2218235112228	353	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATTGAAAATGTCAGAG	NA	False	NA	NA	False	AATGAA	-2	NA	23880957	23714427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23717324_23717473_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.77	chr5	-	5082	16	NNC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-18	-5289	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72.7529762659615	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGGGTGTGAACATT	NA	False	NA	NA	False	AATAAA	-17	NA	23880983	23715738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23717324_23717461_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.78	chr5	-	2481	17	NNC	ENSMUSG00000062604.12	novel	946	9	NA	NA	-19	-5291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.5835034305364	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCTTGGGTGTGAACA	NA	False	NA	NA	False	AATAAA	-15	NA	23880984	23715740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23716119_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.79	chr5	-	2353	15	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	2	-8156	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_7	57.2884306445401	350	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGCAATGTTTCCCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	23881010	23718605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.8	chr5	-	5366	16	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	21	-1081	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	371	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACGTATTTCAGAAT	NA	False	NA	NA	False	AATAAA	-26	NA	23880991	23709342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25527.80	chr5	-	1631	2	ISM	ENSMUSG00000062604.12	ENSMUST00000197622.5	1963	6	-11	130103	-11	-59535	5prime_fragment	FALSE	canonical	3	283	junction_1	0	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	23880976	23879262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_23880773_23880855
ES.25527.81	chr5	-	1679	1	FSM	ENSMUSG00000105565.2	ENSMUST00000196851.2	808	1	-401	-470	-401	470	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	23880945	23879266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23879300_23880900
ES.25527.82	chr5	-	1175	2	ISM	ENSMUSG00000062604.12	ENSMUST00000197622.5	1963	6	-29	130577	18	-60009	5prime_fragment	FALSE	canonical	3	283	junction_1	0	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATCTTTATTTTGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	23880994	23879736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_23880773_23880855
ES.25527.9	chr5	-	5388	16	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	19	-1088	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATTTGACGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	23880993	23709349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ES.25528.1	chr5	+	3937	2	Antisense	novelGene_ENSMUSG00000057541.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAATAAATATATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	23964654	23970654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_23965297_23967359
ES.25529.1	chr5	+	2734	15	NNC	ENSMUSG00000028999.16	novel	3363	14	NA	NA	-17	-562	intron_retention	TRUE	canonical	0	0	junction_10	38.1322216311955	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGAAAAACAAACACAAACAA	NA	False	NA	NA	False	NA	NA	NA	23992691	24024733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24010482_24010568_24010719_24012038_24012194_24014781_24015193_24015894_24016033_24016711_24016841_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.10	chr5	+	2197	6	NNC	ENSMUSG00000028999.16	novel	3363	14	NA	NA	-5	-3147	intron_retention	FALSE	non_canonical	1	3	junction_5	30.6828942572242	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCTGTGTCAGAGATG	NA	False	NA	NA	False	TATAAA	-25	NA	23992703	24012021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24011668_24011834
ES.25529.11	chr5	+	3287	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	32.1479911243818	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTATTTCTTTGTGT	NA	False	NA	3	True	NA	NA	NA	23992703	24025366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016841_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.12	chr5	+	4588	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-3	1659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	23.3565267912419	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAACAAATC	NA	False	NA	NA	False	AATAAA	-24	NA	23992705	24027026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025887_24026118_24026282
ES.25529.13	chr5	+	3350	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	27.3848295391607	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAAGTATTTCTTTGTG	NA	False	NA	2	True	NA	NA	NA	23992706	24025365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.14	chr5	+	5893	18	NNC	ENSMUSG00000028999.16	novel	3363	14	NA	NA	-2	2914	intron_retention	FALSE	non_canonical	0	0	junction_7	35.7143608501434	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTCATCTTTGAATT	NA	False	NA	NA	False	ATTAAA	-5	NA	23992706	24028281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24010482_24010568_24010719_24012043_24012194_24014781_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025891_24026118_24026282_24026398_24026461
ES.25529.15	chr5	+	3462	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-2	1173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	22.034720077389	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCTTAGCTGGAAGATT	NA	False	NA	9	True	AATAAA	-34	NA	23992706	24026540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025383_24026393
ES.25529.16	chr5	+	4185	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-2	1174	intron_retention	FALSE	non_canonical	0	0	junction_14	23.7969185680275	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAGCTGGAAGATTT	NA	False	NA	10	True	AATAAA	-35	NA	23992706	24026541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025891_24026118_24026282
ES.25529.18	chr5	+	3279	15	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2742644579536	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGATGGTGGTTAAGCTA	NA	False	NA	-52	True	NA	NA	NA	23992720	24025311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992930_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.19	chr5	+	3913	18	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	2	1174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.8711723395544	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAGCTGGAAGATTT	NA	False	NA	10	True	AATAAA	-35	NA	23992720	24026541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016803_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025891_24026118_24026282_24026396_24026461
ES.25529.2	chr5	+	2770	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-17	-458	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	32.1479911243818	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCAGAATAGTTTCTTG	NA	False	NA	NA	False	GATAAA	-33	NA	23992691	24024837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016841_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.20	chr5	+	2433	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	13	852	3	-780	multi-exon	FALSE	canonical	2	56	junction_5	10.4591040315534	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAACAAGACGTTGAAAT	NA	False	NA	NA	False	AATGAA	-19	NA	23992721	24024515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.21	chr5	+	4450	14	NNC	ENSMUSG00000028999.16	novel	3048	14	NA	NA	3	0	intron_retention	TRUE	non_canonical	0	0	junction_5	22.5233606539506	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAATAGTTTTATGA	NA	False	NA	-68	True	NA	NA	NA	23992721	24025295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24011677_24011844_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.22	chr5	+	4075	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	4	1168	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	27.743735216261	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTGAGCTTAGCTGGA	NA	False	NA	4	True	AATAAA	-29	NA	23992722	24026535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025890_24026126_24026292
ES.25529.23	chr5	+	3917	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	4	1170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	29.6127600124601	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGCTTAGCTGGAAG	NA	False	NA	6	True	AATAAA	-31	NA	23992722	24026537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24016731_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025890_24026118_24026282
ES.25529.24	chr5	+	3283	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	14	1	4	0	multi-exon	FALSE	canonical	2	56	junction_5	10.4591040315534	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTATTTCTTTGTGT	NA	False	NA	3	True	NA	NA	NA	23992722	24025366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.28	chr5	+	4105	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	7	1198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	23.3565267912419	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAAAGTTTTATTCTC	NA	False	NA	34	True	AATAAA	-39	NA	23992725	24026565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025889_24026118_24026282
ES.25529.3	chr5	+	5473	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-12	2915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.8207342191642	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTCATCTTTGAATTT	NA	False	NA	NA	False	ATTAAA	-6	NA	23992696	24028282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016841_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025892_24026118_24026282_24026396_24026461
ES.25529.30	chr5	+	4382	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-3	1485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	23.3565267912419	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGGTGGCGCATGC	NA	False	NA	NA	False	NA	NA	NA	23992735	24026852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025889_24026118_24026282
ES.25529.31	chr5	+	4005	18	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-3	1176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	28.1256449368577	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAGCTGGAAGATTTCT	NA	False	NA	12	True	AATAAA	-37	NA	23992735	24026543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025891_24026118_24026282_24026396_24026461
ES.25529.32	chr5	+	6140	17	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-1	3244	intron_retention	FALSE	non_canonical	0	0	junction_15	23.3565267912419	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTGTCACAAGTGGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	23992737	24028611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025888_24026118_24026282
ES.25529.33	chr5	+	2156	7	NNC	ENSMUSG00000028999.16	novel	3363	14	NA	NA	-1	-3206	intron_retention	FALSE	non_canonical	1	2	junction_4	38.477987935384	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTATTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	23992737	24011962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24006091_24006144_24010307_24011668_24011834
ES.25529.34	chr5	+	2999	14	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-1	-36	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	23.3123884580989	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACAAAAAGACCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	23992737	24025259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24016731_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.35	chr5	+	3156	15	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	22.3498390625626	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCATATAAGTATTTCT	NA	False	NA	-3	True	NA	NA	NA	23992738	24025360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016803_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.36	chr5	+	3290	14	FSM	ENSMUSG00000028999.16	ENSMUST00000124680.8	3363	14	22	51	0	20	multi-exon	FALSE	canonical	2	56	junction_5	10.8529711253887	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGTTAAGCTATGGT	NA	False	NA	-48	True	NA	NA	NA	23992738	24025315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.37	chr5	+	3244	15	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.1451611704523	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTATTTCTTTGTGTG	NA	False	NA	4	True	NA	NA	NA	23992738	24025367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010777_24012118_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.38	chr5	+	3198	15	NIC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	22.5782087465787	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATAAGTATTTCTTTGT	NA	False	NA	1	True	NA	NA	NA	23992738	24025364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016841_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.4	chr5	+	2907	14	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	22.566142098967	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAAGTATTTCTTTGTG	NA	False	NA	2	True	NA	NA	NA	23992696	24025365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020693_24022080_24022152_24024385
ES.25529.40	chr5	+	5215	18	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	1	1177	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.7367121987956	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCTGGAAGATTTCTA	NA	False	NA	13	True	AATAAA	-38	NA	23992739	24026544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24011679_24011844_24012194_24014781_24014893_24014966_24015191_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24023572_24023677_24024385_24025681_24025891_24026119_24026282_24026400_24026461
ES.25529.41	chr5	+	3619	16	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	64	1174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	28.5801796122184	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAGCTGGAAGATTT	NA	False	NA	10	True	AATAAA	-35	NA	23992802	24026541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020704_24022074_24022152_24024385_24025681_24025890_24026118_24026282
ES.25529.42	chr5	+	3994	1	FSM	ENSMUSG00000104569.2	ENSMUST00000199495.2	884	1	326	-3436	326	3436	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGATTGTTTCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	23996025	24000019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23996000_2.4e+07
ES.25529.43	chr5	+	1679	2	NNC	ENSMUSG00000028999.16	novel	671	3	NA	NA	-423	-1910	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAAGAAAATTCTGC	NA	False	NA	NA	False	NA	NA	NA	24011412	24013258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24011668_24011834
ES.25529.6	chr5	+	2571	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	-12	739	-12	-667	multi-exon	FALSE	canonical	2	56	junction_5	10.4591040315534	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACTTGGGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	23992696	24024628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.25529.8	chr5	+	4057	18	NNC	ENSMUSG00000028999.16	novel	3298	15	NA	NA	-12	1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	28.1256449368577	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTGGAAGATTTCTACA	NA	False	NA	15	True	AATAAA	-40	NA	23992696	24026546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385_24025681_24025887_24026118_24026282_24026402_24026461
ES.25529.9	chr5	+	2781	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	-5	522	-5	-450	multi-exon	FALSE	canonical	2	56	junction_5	10.4591040315534	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTTCTTGTCTTGAGT	NA	False	NA	NA	False	GATAAA	-41	NA	23992703	24024845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ES.2553.1	chr10	+	4147	1	Intergenic	novelGene_1936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32711342	32715489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_32711300_32715500
ES.25530.1	chr5	-	179	2	Antisense	novelGene_ENSMUSG00000104569.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGGCAATAGGTT	4794	False	NA	NA	False	NA	NA	NA	24025884	23891098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_23891106_24025712
ES.25530.10	chr5	-	5186	3	NNC	ENSMUSG00000105987.5	novel	474	3	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTCTGAGGTCTTC	5259	False	NA	NA	False	NA	NA	NA	23917662	23903291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23903947_23904460_23905574_23914244
ES.25530.11	chr5	-	2285	4	NNC	ENSMUSG00000105987.5	novel	345	4	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_1	8.05536398239638	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTCTGAGGTCTTC	5258	False	NA	NA	False	NA	NA	NA	23917663	23903291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23905463_23915351_23915407_23916113_23916149_23917639
ES.25530.12	chr5	-	805	2	NNC	ENSMUSG00000105987.5	novel	503	3	NA	NA	-1004	203	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCAGATCTACGCCTAT	NA	False	NA	NA	False	NA	NA	NA	23905278	23903864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23904335_23904943
ES.25530.13	chr5	-	2039	4	NNC	ENSMUSG00000105987.5	novel	345	4	NA	NA	1	189	intron_retention	FALSE	non_canonical	0	0	junction_1	8.48528137423857	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTAGAATTTCAAGAGTC	5258	False	NA	NA	False	NA	NA	NA	23917663	23903878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23905463_23915351_23915407_23916113_23916490_23917639
ES.25530.14	chr5	-	993	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	-3	-645	1	-513	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAATAAAA	5258	False	NA	NA	False	NA	NA	NA	23917663	23904580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
ES.25530.15	chr5	-	177	1	Intergenic	novelGene_21270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAATTAGGGCAG	3692	False	NA	NA	False	NA	NA	NA	23919229	23919052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23919100_23919200
ES.25530.16	chr5	-	5909	15	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	-44	2779	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	99.7659761642214	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTGTTGCAGAAAATAT	NA	False	NA	NA	False	AATAAA	-26	NA	23983420	23942866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965294_23967356_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
ES.25530.17	chr5	-	174	1	Intergenic	novelGene_21271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTGAGCAAATGGAGTT	NA	False	NA	NA	False	NA	NA	NA	23943194	23943020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23943000_23943200
ES.25530.18	chr5	-	3466	15	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	1269	-477	89	469	3prime_fragment	FALSE	canonical	3	301	junction_13	30.0112223907617	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGGGAAAGTATAATTG	NA	False	NA	NA	False	NA	NA	NA	23983287	23945176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
ES.25530.19	chr5	-	3437	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	-17	-13	-17	13	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCTGGCTAACGGG	NA	False	NA	5	True	AATAAA	-37	NA	23988726	23945632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.2	chr5	-	870	1	Intergenic	novelGene_21269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23902197	23901327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23901300_23902200
ES.25530.20	chr5	-	3261	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.2920757834695	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988671	23945645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952884_23953753_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.21	chr5	-	4812	16	NIC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	54	0	intron_retention	FALSE	canonical	3	7	junction_5	123.577703850205	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988655	23945646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.23	chr5	-	7192	14	NIC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	54	0	intron_retention	FALSE	canonical	3	301	junction_11	31.0021949976862	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988655	23945646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23951526_23952791_23952919_23953680_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.24	chr5	-	3483	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.944311263256	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988696	23945646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23956234_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.26	chr5	-	4003	9	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	-1833	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	158.426984365038	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCATGTAAAAATCTTG	NA	False	NA	-10	True	AATAAA	-22	NA	23961407	23945647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946972_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23957259_23957386_23959455
ES.25530.27	chr5	-	4789	17	NIC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	122.996046049253	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCATGTAAAAATCTTG	NA	False	NA	-10	True	AATAAA	-22	NA	23988692	23945647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23954996_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.28	chr5	-	4283	15	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	9	-2	intron_retention	FALSE	canonical	3	7	junction_5	95.6895490422981	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCATGTAAAAATCTT	NA	False	NA	-11	True	AATAAA	-21	NA	23988700	23945648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.3	chr5	-	5703	2	Fusion	ENSMUSG00000118744.1_ENSMUSG00000105987.5	novel	503	3	NA	NA	1	4	intron_retention	FALSE	non_canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTCTGAGGTCTTCTT	5258	False	NA	NA	False	NA	NA	NA	23917663	23903289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_23905574_23914244
ES.25530.30	chr5	-	5069	8	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	1509	-2	intron_retention	FALSE	canonical	1	3	junction_7	134.672543146519	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCATGTAAAAATCTT	NA	False	NA	-11	True	AATAAA	-21	NA	23958065	23945648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23954996
ES.25530.32	chr5	-	3317	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_12	92.5211327211249	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCATGTAAAAATCTT	NA	False	NA	-11	True	AATAAA	-21	NA	23988686	23945648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973847_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.33	chr5	-	3360	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	90.9460401679052	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	-12	True	AATAAA	-20	NA	23988690	23945649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983474_23988509
ES.25530.34	chr5	-	4715	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	141.296881047495	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	-12	True	AATAAA	-20	NA	23988689	23945649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23954992_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.35	chr5	-	3745	15	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	25	-3	intron_retention	FALSE	canonical	3	301	junction_12	29.7818599767286	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	-12	True	AATAAA	-20	NA	23988684	23945649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.36	chr5	-	3605	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	125.070220276451	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	-12	True	AATAAA	-20	NA	23988703	23945649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23954123_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.37	chr5	-	3224	15	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	44	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	128.499265462841	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCATGTAAAAATCT	NA	False	NA	-12	True	AATAAA	-20	NA	23988665	23945649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.38	chr5	-	3380	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	94.2920757834695	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGTGCATGTAAAAA	NA	False	NA	-15	True	AATAAA	-17	NA	23988671	23945652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952937_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.40	chr5	-	3342	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	96.3470578458707	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988654	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959579_23965215_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.41	chr5	-	1857	6	NNC	ENSMUSG00000057541.15	novel	3645	16	NA	NA	1368	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	159.060994590126	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23953742	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948568_23951423_23951526_23952791_23952919_23953680
ES.25530.42	chr5	-	4711	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	157.43684249565	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988686	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23954996_23956398_23957259_23957386_23959455_23959583_23965219_23965298_23967360_23967473_23973765_23973847_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.46	chr5	-	3412	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	157.696256693049	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988684	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948541_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23954996_23955112_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.48	chr5	-	3632	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.117881915416	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988700	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23949854_23950097_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.49	chr5	-	3268	16	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	92.6118782878309	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988651	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.5	chr5	-	5420	3	Fusion	ENSMUSG00000118744.1_ENSMUSG00000105987.5	novel	503	3	NA	NA	1	3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCTGAGGTCTTCT	5258	False	NA	NA	False	NA	NA	NA	23917663	23903290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_23905574_23914244_23915432_23915713
ES.25530.50	chr5	-	3161	17	NNC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.3931332794333	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23988662	23945653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23945958_23946148_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.53	chr5	-	5203	15	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	212	-1	intron_retention	FALSE	canonical	1	3	junction_6	153.05702885406	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTGAGTGCATGTAAA	NA	False	NA	-17	True	AATAAA	-15	NA	23983164	23945654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948541_23951423_23951526_23952791_23952919_23953680_23953921_23954802_23954865_23954996_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070
ES.25530.54	chr5	-	5125	10	NIC	ENSMUSG00000057541.15	novel	3645	16	NA	NA	-1749	-1	intron_retention	FALSE	canonical	3	351	junction_9	20.6994960277411	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTGAGTGCATGTAAA	NA	False	NA	-17	True	AATAAA	-15	NA	23969197	23945654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360
ES.25530.56	chr5	-	3318	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	34	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.8882683126565	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTACTAATTATGTA	NA	False	NA	-57	True	AATAAA	-15	NA	23988675	23945694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951520_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.57	chr5	-	3142	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	23	242	23	-234	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGGGCTCCTACTTCC	NA	False	NA	NA	False	NA	NA	NA	23988686	23945887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.58	chr5	-	2250	3	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	-23386	-234	intron_retention	TRUE	non_canonical	0	0	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGGGCTCCTACTTCC	NA	False	NA	NA	False	NA	NA	NA	24012095	23945887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23946012_24009802_24011673_24011839
ES.25530.59	chr5	-	2355	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	1	1051	1	666	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTTGCAATATTTGT	NA	False	NA	9	True	AGTAAA	-37	NA	23988708	23946696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.6	chr5	-	2266	4	NIC	ENSMUSG00000105987.5	novel	345	4	NA	NA	1	3	intron_retention	FALSE	canonical	1	2	junction_1	7.54247233265651	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCTGAGGTCTTCT	5258	False	NA	NA	False	NA	NA	NA	23917663	23903290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23905455_23915363_23915407_23916113_23916149_23917639
ES.25530.60	chr5	-	3858	16	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	13	648	intron_retention	FALSE	canonical	3	7	junction_7	94.3860630013186	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTAATCAGCTTAA	NA	False	NA	-9	True	AGTAAA	-19	NA	23988696	23946714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.61	chr5	-	178	1	Intergenic	novelGene_21272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	23952234	23952056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_23952100_23952200
ES.25530.62	chr5	-	1814	10	NNC	ENSMUSG00000057541.15	novel	750	6	NA	NA	-8	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.888351599861	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAAGTTTCAGAATAT	NA	False	NA	NA	False	AGTAAA	-22	NA	23988717	23955805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23956208_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.63	chr5	-	1609	7	ISM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	6	19108	6	510	5prime_fragment	FALSE	canonical	3	301	junction_4	33.3254157263392	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTAGGAAACAGTGAATAA	NA	False	NA	NA	False	ATTAAA	-21	NA	23988703	23964753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ES.25530.64	chr5	-	1512	8	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	-1760	461	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	161.257304849569	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTCCTTTCTCTCA	NA	False	NA	NA	False	AAAAAG	-18	NA	23990469	23964802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988908_23988967_23990381
ES.25530.65	chr5	-	3880	2	Antisense	novelGene_ENSMUSG00000028999.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGCAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	24013693	24009646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24011673_24011839
ES.25530.66	chr5	-	3779	3	Antisense	novelGene_ENSMUSG00000028999.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	24013691	24009651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24010150_24010243_24011673_24011839
ES.25530.7	chr5	-	4910	3	NNC	ENSMUSG00000105987.5	novel	474	3	NA	NA	82	3	intron_retention	FALSE	non_canonical	0	0	junction_1	9	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCTGAGGTCTTCT	5343	False	NA	NA	False	NA	NA	NA	23917578	23903290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23905574_23914244_23915407_23916113
ES.25530.8	chr5	-	1676	5	NNC	ENSMUSG00000105987.5	novel	345	4	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.39509972887452	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGTCTGAGGTCTTCT	5259	False	NA	NA	False	NA	NA	NA	23917662	23903290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23904335_23904943_23905463_23915351_23915407_23916113_23916149_23917639
ES.25530.9	chr5	-	3776	3	NNC	ENSMUSG00000105987.5	novel	474	3	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_1	9	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTAGTCTGAGGTCTTC	5259	False	NA	NA	False	NA	NA	NA	23917662	23903291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_23905462_23915349_23915407_23916113
ES.25531.1	chr5	-	1066	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	52	7	52	-7	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTTTATTAGTGTA	NA	False	NA	NA	False	AATAAA	-8	NA	24049107	24043948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24044827_24046707_24046757_24048968
ES.25531.2	chr5	-	460	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	-20	685	-20	-685	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTATGTGTGTGTGTCT	NA	False	NA	-6	True	AATAAA	-41	NA	24049179	24044626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24044827_24046707_24046757_24048968
ES.25531.3	chr5	-	181	1	NIC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	4327	-710	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTGCCTTTCATACT	NA	False	NA	-31	True	AATAAA	-16	NA	24044832	24044651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24044700_24044800
ES.25532.1	chr5	+	2884	3	NIC	ENSMUSG00000097180.6	novel	1375	4	NA	NA	-16	-6	intron_retention	FALSE	canonical	0	0	junction_2	13.5	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAATCTGTCGTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	24055578	24060030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24057154_24057715_24057759_24058764
ES.25532.2	chr5	+	4438	1	FSM	ENSMUSG00000118905.1	ENSMUST00000175580.3	71	1	-1611	-2756	-1611	2756	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCGTCAGGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	24055596	24060034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24055600_24060000
ES.25532.3	chr5	+	3428	2	NIC	ENSMUSG00000097180.6	novel	1375	4	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTCGTCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	24055597	24060031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24057759_24058764
ES.25532.4	chr5	+	3877	2	NIC	ENSMUSG00000097180.6	novel	1375	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	27	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGTCAGGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	24055597	24060036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24057154_24057715
ES.25532.5	chr5	+	172	1	ISM	ENSMUSG00000097180.6	ENSMUST00000181574.6	1375	4	4156	114	4152	-114	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	24059750	24059922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24059800_24059900
ES.25533.1	chr5	+	3252	1	Intergenic	novelGene_21273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTTGCCTCTTTCATC	NA	False	NA	NA	False	NA	NA	NA	24060161	24063413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24060200_24063400
ES.25534.1	chr5	+	3828	5	Antisense	novelGene_ENSMUSG00000028995.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	24183987	24194000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24184644_24185482_24185573_24188147_24188265_24190741_24190837_24191130
ES.25535.1	chr5	+	175	1	Intergenic	novelGene_21276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	24221289	24221464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24221300_24221500
ES.25536.1	chr5	-	6053	13	NNC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.6874912095624	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235696	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192878_24193063_24196384_24196469_24196733_24196836_24204938_24205018_24235476
ES.25536.10	chr5	-	6150	13	NIC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	68	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	23.0265547188941	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACTAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24235235	24165951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234653_24234758_24234911
ES.25536.12	chr5	-	6150	14	NNC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-11	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	25.7796764133364	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACTAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24235699	24165951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234653_24234758_24234917_24235039_24235496
ES.25536.13	chr5	-	5783	13	NNC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	12	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.6042529583684	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACTAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24235634	24165951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24192923_24193019_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.16	chr5	-	5124	12	NIC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-49	-882	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.3033446430527	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTAAAGGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	24235737	24166810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.17	chr5	-	7674	1	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	15543	-882	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTAAAGGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	24174484	24166810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24166800_24174500
ES.25536.18	chr5	-	4765	11	FSM	ENSMUSG00000028995.15	ENSMUST00000030849.13	5659	11	12	882	12	-882	multi-exon	FALSE	canonical	3	6	junction_1	17.5795335546766	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTAAAGGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	24235676	24166810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24170357_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.19	chr5	-	5310	14	NNC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-10	-882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	25.6438972750949	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTAAAGGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	24235698	24166810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234653_24234758_24234917_24235039_24235476
ES.25536.2	chr5	-	5987	12	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.3033446430527	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235718	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.20	chr5	-	5698	12	NNC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-11	-882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3816293489087	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATTAAAGGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	24235699	24166810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24172042_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.22	chr5	-	4962	12	NIC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-11	-1006	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.3033446430527	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAGCAGGAATTCCAGA	NA	False	NA	NA	False	NA	NA	NA	24235699	24166934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.23	chr5	-	180	1	Intergenic	novelGene_21274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	24196263	24196083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24196100_24196300
ES.25536.24	chr5	-	3331	2	Intergenic	novelGene_21275	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	24224205	24220660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24221281_24221494
ES.25536.3	chr5	-	5797	11	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	16	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	19.2002604149006	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235630	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24204938_24205018_24235476
ES.25536.4	chr5	-	5989	12	NNC	ENSMUSG00000028995.15	novel	2195	11	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.2697871899741	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235740	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235496
ES.25536.5	chr5	-	6024	13	NNC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.8477752381569	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235634	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234917_24235039_24235476
ES.25536.6	chr5	-	5670	11	FSM	ENSMUSG00000028995.15	ENSMUST00000030849.13	5659	11	-11	0	-11	0	multi-exon	FALSE	canonical	3	6	junction_1	17.5795335546766	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235699	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24170357_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25536.7	chr5	-	6094	13	NNC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.8477752381569	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235698	24165928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234911_24235039_24235476
ES.25536.8	chr5	-	5504	11	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	591	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	24.0293570450813	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCTTCTAGATCATT	NA	False	NA	NA	False	AATAAA	-15	NA	24234712	24165930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24170357_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24234653
ES.25536.9	chr5	-	5947	12	NNC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	19	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3816293489087	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACTAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24235669	24165951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24170357_24171131_24171462_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ES.25537.1	chr5	+	153	1	Intergenic	novelGene_21277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAGAAAAT	2757	False	NA	NA	False	NA	NA	NA	24259519	24259672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24259500_24259700
ES.25538.1	chr5	-	2020	2	Intergenic	novelGene_21278	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGATTTCTTTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	24305472	24303244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24304184_24304391
ES.25539.1	chr5	+	3129	12	FSM	ENSMUSG00000028986.13	ENSMUST00000200116.5	3086	12	-19	-24	-18	16	multi-exon	FALSE	canonical	1	1	junction_8	21.6954883530201	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACGTGTGTTCATTAA	NA	False	NA	29	True	ATTAAA	-36	NA	24305584	24365806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24356716_24356839_24361887_24362090_24363536_24363635_24364444
ES.25539.10	chr5	+	3404	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	6	-444	5	437	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATATGCACTGTGT	NA	False	NA	15	True	NA	NA	NA	24305608	24366227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ES.25539.11	chr5	+	3876	5	NIC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	36185	439	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	23.0258007461196	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATATGCACTGTGTAC	NA	False	NA	17	True	NA	NA	NA	24341830	24366229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24343479_24346148_24346292_24361887_24362090_24363536_24363635_24364444
ES.25539.12	chr5	+	5708	5	NIC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	36821	3	intron_retention	FALSE	canonical	3	52	junction_2	1.11803398874989	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	9	True	ATTAAA	-16	NA	24342466	24365786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ES.25539.13	chr5	+	4071	1	FSM	ENSMUSG00000106665.2	ENSMUST00000196080.2	2595	1	-1476	0	-1476	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAAATTTCTGAGCC	NA	False	NA	NA	False	CATAAA	-37	NA	24356815	24360886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24356800_24360900
ES.25539.14	chr5	+	5310	3	ISM	ENSMUSG00000028986.13	ENSMUST00000200116.5	3086	12	52612	0	52570	0	3prime_fragment	FALSE	canonical	3	53	junction_2	0.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGATTTGCTTTGTTT	NA	False	NA	5	True	ATTAAA	-12	NA	24358215	24365782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24362090_24363536_24363635_24364444
ES.25539.2	chr5	+	2987	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	-18	-3	-18	3	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	9	True	ATTAAA	-16	NA	24305584	24365786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ES.25539.3	chr5	+	6909	10	NIC	ENSMUSG00000028986.13	novel	3086	12	NA	NA	-18	3	intron_retention	FALSE	canonical	1	1	junction_8	18.0123414481417	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	9	True	ATTAAA	-16	NA	24305584	24365786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24356839_24361887_24363635_24364444
ES.25539.4	chr5	+	8518	11	NNC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	-14	3	intron_retention	TRUE	canonical	0	0	junction_5	22.2432012084592	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	False	NA	9	True	ATTAAA	-16	NA	24305588	24365786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24341235_24341440_24343209_24343303_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ES.25539.5	chr5	+	4894	10	NNC	ENSMUSG00000028986.13	novel	3086	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	23.1612703547203	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGATTTGCTTTGTTT	NA	False	NA	5	True	ATTAAA	-12	NA	24305598	24365782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24345645_24346148_24346292_24361887_24362090_24363536_24363635_24364444
ES.25539.6	chr5	+	2985	11	NNC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.4025860147278	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTGCTTTGTTTA	NA	False	NA	6	True	ATTAAA	-13	NA	24305607	24365783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364420
ES.25539.7	chr5	+	5187	10	NNC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	23.0560240916247	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTGCTTTGTTTA	NA	False	NA	6	True	ATTAAA	-13	NA	24305608	24365783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24341317_24342014_24343479_24346148_24346292_24361887_24362090_24363536_24363635_24364444
ES.25539.9	chr5	+	2397	7	NIC	ENSMUSG00000028986.13	novel	2966	11	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.447537167423	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTGCTTTGTTTA	NA	False	NA	6	True	ATTAAA	-13	NA	24305608	24365783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24305873_24339961_24340138_24343303_24343479_24346148_24346292_24361887_24362090_24363536_24363635_24364444
ES.2554.1	chr10	+	2033	1	Antisense	novelGene_ENSMUSG00000069670.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATGGTAGATATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	32765788	32767821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_32765800_32767800
ES.25540.1	chr5	-	950	1	FSM	ENSMUSG00000106133.2	ENSMUST00000197957.2	349	1	-61	-540	-61	540	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGCTTAAAAGTCCAAAA	5854	False	NA	NA	False	AATAAA	-45	NA	24323723	24322773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24322800_24323700
ES.25541.1	chr5	-	192	1	Intergenic	novelGene_21279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATTCTAAAGTGTTTG	7413	False	NA	NA	False	NA	NA	NA	24337166	24336974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24337000_24337200
ES.25542.1	chr5	-	196	1	Intergenic	novelGene_21280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAGGAGGCAAAGTATA	5413	False	NA	NA	False	NA	NA	NA	24339166	24338970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24339000_24339200
ES.25543.1	chr5	+	1627	6	FSM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	-14	11	-14	-11	multi-exon	FALSE	canonical	2	3	junction_3	25.7013618316229	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTCAATAAGCAAGG	5169	False	NA	NA	False	AATAAA	-9	NA	24369983	24387824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24382997_24383085_24386078_24386164_24386905
ES.25543.10	chr5	+	4742	3	ISM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	9358	2	-3546	-2	3prime_fragment	FALSE	canonical	3	52	junction_1	7	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCAAGGGACTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	24379355	24387833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24383085_24386078_24386164_24386905
ES.25543.11	chr5	+	4368	3	ISM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	10942	5	-1999	-5	3prime_fragment	FALSE	canonical	3	52	junction_1	7	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGACTGTCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	24380902	24389006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24383085_24386078_24386164_24386905
ES.25543.12	chr5	+	2986	4	NNC	ENSMUSG00000048439.16	novel	2914	7	NA	NA	944	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.1126983722081	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATAAGCAAGGGACTC	291	False	NA	NA	False	AATAAA	-14	NA	24383845	24387829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24384195_24384238_24385395_24385606_24386164_24386905
ES.25543.2	chr5	+	1703	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	33	1178	-4	-2	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCAAGGGACTCTTTT	5179	False	NA	NA	False	AATAAA	-18	NA	24369993	24387833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ES.25543.3	chr5	+	2721	3	ISM	ENSMUSG00000048439.16	ENSMUST00000115101.4	1624	6	-4	11252	-4	1704	5prime_fragment	FALSE	canonical	3	61	junction_2	8	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAACTGTGTCTC	5179	False	NA	NA	False	NA	NA	NA	24369993	24376583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24370202_24372340_24372564_24374293
ES.25543.4	chr5	+	3619	6	ISM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	34	3	-3	-3	intron_retention	FALSE	canonical	3	52	junction_5	8.03492377064027	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGACTGTCTGTTATCT	5180	False	NA	NA	False	NA	NA	NA	24369994	24389008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078
ES.25543.5	chr5	+	2878	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	35	1	-2	-1	multi-exon	FALSE	canonical	3	52	junction_5	7.43116560320265	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTGTCTGTTATCTAC	5181	False	NA	NA	False	NA	NA	NA	24369995	24389010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ES.25543.6	chr5	+	4855	2	FSM	ENSMUSG00000048439.16	ENSMUST00000147392.2	644	2	-2503	-1708	5	1708	multi-exon	FALSE	canonical	3	61	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTGTGTCTCGAAA	5188	False	NA	NA	False	NA	NA	NA	24370002	24376587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24372564_24374293
ES.25543.7	chr5	+	3215	8	NNC	ENSMUSG00000048439.16	novel	2914	7	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.320188767942	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTGTCTGTTATCTA	5206	False	NA	NA	False	NA	NA	NA	24370020	24389009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24370202_24372340_24372564_24374293_24374389_24374775_24375139_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ES.25543.8	chr5	+	1410	7	NNC	ENSMUSG00000048439.16	novel	2914	7	NA	NA	28	18933	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	24.1712639305436	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAAAGAGTCCATTGACA	5211	False	NA	NA	False	GATAAA	-17	NA	24370025	24407944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24407277
ES.25543.9	chr5	+	3593	7	NNC	ENSMUSG00000048439.16	novel	2914	7	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.8327740429189	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGACTGTCTGTTAT	5212	False	NA	NA	False	NA	NA	NA	24370026	24389006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24370202_24372340_24372564_24374293_24375139_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ES.25544.1	chr5	-	4649	2	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGTCCTTAAATAGG	5901	False	NA	NA	False	AATAAA	-27	NA	24377713	24371723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372533_24373873
ES.25544.2	chr5	-	2448	6	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.86781592116274	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGTTGGTGTAAGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	24393605	24372127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372531_24373873_24375240_24376114_24376263_24388207_24388405_24388526_24388778_24393522
ES.25544.3	chr5	-	2347	6	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	4.53431361950185	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCAGGTGTGTTGGTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	24393613	24372133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372533_24373873_24375240_24376114_24376263_24388207_24388405_24388526_24388673_24393522
ES.25544.4	chr5	-	4015	3	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCAGGTGTGTTGGTGT	5250	False	NA	NA	False	ATTAAA	-11	NA	24378364	24372133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372533_24373873_24375240_24376114
ES.25544.5	chr5	-	1371	8	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.43547848464572	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCAGGTGTGTTGGTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	24393587	24372133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372533_24373877_24374121_24375157_24375240_24376114_24376263_24381816_24381908_24388207_24388405_24388526_24388673_24393522
ES.25544.6	chr5	-	1436	8	Antisense	novelGene_ENSMUSG00000048439.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	4.65109159888563	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCAGGTGTGTTGGTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	24393597	24372133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_24372533_24373873_24374121_24375106_24375240_24376114_24376263_24381816_24381908_24388207_24388405_24388526_24388673_24393522
ES.25545.1	chr5	+	335	1	Intergenic	novelGene_21281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	24462298	24462633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24462300_24462600
ES.25546.1	chr5	-	4438	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	-179	-38	-179	38	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAGTGGCAGTGCCAG	NA	False	NA	32	True	NA	NA	NA	24556781	24524548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.10	chr5	-	3660	14	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	7645	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.697690424395	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGGGTGCTGGTTAGC	6477	False	NA	-30	True	NA	NA	NA	24548957	24524610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24548866
ES.25546.11	chr5	-	3438	15	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-6428	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	9.14508901330241	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGGGTGCTGGTTAGC	NA	False	NA	-30	True	NA	NA	NA	24541017	24524610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24536793_24536963_24537111_24537889_24538055_24540977
ES.25546.12	chr5	-	4172	16	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-75	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.26146602890139	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCAGGGTGCTGGTTA	NA	False	NA	-32	True	NA	NA	NA	24556677	24524612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24536793_24536890_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.13	chr5	-	3963	15	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-75	-26	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.29830844253989	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCAGGGTGCTGGTTA	NA	False	NA	-32	True	NA	NA	NA	24556677	24524612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556512
ES.25546.15	chr5	-	7587	9	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-123	-27	intron_retention	FALSE	canonical	3	15	junction_3	4.31385848168435	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTCCAGGGTGCTGGTT	NA	False	NA	-33	True	NA	NA	NA	24556725	24524613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24527753_24528068_24529584_24529953_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.16	chr5	-	4619	14	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-88	-28	intron_retention	FALSE	canonical	3	15	junction_8	4.48930352658919	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTCCAGGGTGCTGGT	NA	False	NA	-34	True	NA	NA	NA	24556690	24524614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.17	chr5	-	4368	15	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-160	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.46830035577585	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGACTCCAGGGTGCT	NA	False	NA	-37	True	NA	NA	NA	24556762	24524617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537129_24537889_24538055_24553308_24553540_24556205
ES.25546.2	chr5	-	6706	11	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-146	33	intron_retention	FALSE	canonical	3	19	junction_4	4.00499687890016	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTACTTAAGTGGCAGT	NA	False	NA	27	True	NA	NA	NA	24556748	24524553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527753_24528068_24529584_24529953_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.3	chr5	-	3880	14	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-6422	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.697690424395	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTATCTCATGTTTA	NA	False	NA	1	True	NA	NA	NA	24541011	24524579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24540731
ES.25546.4	chr5	-	4037	14	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	12	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.24466749413606	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGTATCTCATGTTT	NA	False	NA	0	True	NA	NA	NA	24556590	24524580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.5	chr5	-	5559	12	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-75	4	intron_retention	FALSE	canonical	0	0	junction_3	7.97827629015087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGCTGTATCTCATGT	NA	False	NA	-2	True	NA	NA	NA	24556677	24524582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24527652_24527753_24528068_24529584_24529953_24530154_24530491_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.6	chr5	-	5073	12	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	3198	-22	intron_retention	FALSE	canonical	3	15	junction_7	4.59787949687338	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTGCTGGTTAGCTT	2030	False	NA	-28	True	NA	NA	NA	24553404	24524608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24529584_24529953_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308
ES.25546.7	chr5	-	5471	12	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-142	-22	intron_retention	FALSE	canonical	0	0	junction_3	7.97827629015087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTGCTGGTTAGCTT	NA	False	NA	-28	True	NA	NA	NA	24556744	24524608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24527652_24527753_24528068_24529584_24529953_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ES.25546.8	chr5	-	3918	14	NIC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	3063	-24	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	7.58150974020534	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGGGTGCTGGTTAGC	1895	False	NA	-30	True	NA	NA	NA	24553539	24524610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530272_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308
ES.25546.9	chr5	-	3982	16	NNC	ENSMUSG00000038319.15	novel	4221	15	NA	NA	-9282	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.66564096494503	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGGGTGCTGGTTAGC	NA	False	NA	-30	True	NA	NA	NA	24565884	24524610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24565005_24565125_24565821
ES.25547.2	chr5	+	4110	26	FSM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	-40	62	-40	-62	multi-exon	FALSE	canonical	1	2	junction_12	2.97079114042034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCCAGACACCTCTCT	NA	False	NA	NA	False	NA	NA	NA	24569767	24589410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
ES.25547.3	chr5	+	4003	26	NNC	ENSMUSG00000028978.13	novel	4132	26	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	3.11281223333499	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTGTGAGTTACAATG	NA	False	NA	NA	False	CATAAA	-24	NA	24569769	24589325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574916_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
ES.25547.4	chr5	+	5184	25	NIC	ENSMUSG00000028978.13	novel	4132	26	NA	NA	-21	3	intron_retention	FALSE	canonical	1	2	junction_11	2.90802290606904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGAGTTACAATGATT	NA	False	NA	NA	False	CATAAA	-27	NA	24569786	24589328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
ES.25547.6	chr5	+	1904	10	ISM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	14838	152	14838	-5	3prime_fragment	FALSE	canonical	2	4	junction_1	2.75322482074753	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAACCTTGTGAGTTA	6906	False	NA	NA	False	CATAAA	-19	NA	24584645	24589320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
ES.25548.1	chr5	+	2117	1	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGCAAAGGATGGGC	4908	False	NA	NA	False	NA	NA	NA	24592059	24594176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24592100_24594200
ES.25548.2	chr5	+	1972	2	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGCAAAGGATGGGC	4908	False	NA	NA	False	NA	NA	NA	24592059	24594176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24592544_24592688
ES.25548.3	chr5	+	1713	3	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGCAAAGGATGGGC	4908	False	NA	NA	False	NA	NA	NA	24592059	24594176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24592124_24592382_24592544_24592688
ES.25548.4	chr5	+	2538	8	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTATATTTTCTTTCTCT	4908	False	NA	NA	False	NA	NA	NA	24592059	24597514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24592124_24592382_24592544_24592688_24593441_24594777_24594920_24595458_24595621_24596013_24596080_24596201_24596244_24596365
ES.25549.1	chr5	-	3604	14	NNC	ENSMUSG00000038295.15	novel	3902	14	NA	NA	119	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	10.361512763374	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	9337	False	NA	NA	False	ATTAAA	-14	NA	24597022	24589357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686_24593442_24594778_24594921_24595459_24595622_24596014_24596078_24596199_24596246_24596367
ES.25549.2	chr5	-	2618	10	NNC	ENSMUSG00000038295.15	novel	3902	14	NA	NA	1191	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.25967446224258	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTCAATCATTGTAA	8676	False	NA	NA	False	ATTAAA	-14	NA	24594442	24589357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686_24593442_24594360
ES.2555.1	chr10	-	3115	1	Intergenic	novelGene_1937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAAGAATGACATAGA	NA	False	NA	NA	False	AATAAA	-18	NA	32723867	32720752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_32720800_32723900
ES.2555.2	chr10	-	3632	2	Intergenic	novelGene_1938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTACTATTTACTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	32836600	32721394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_32724632_32836205
ES.25550.1	chr5	+	2699	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.9732581967091	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCTGTAGCTTAG	NA	False	NA	29	True	AATAAA	-19	NA	24599381	24614943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605218_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608193_24611102_24611253_24611397_24611493_24611665_24611800_24612308_24612454_24613565_24613817_24614351
ES.25550.10	chr5	+	3121	14	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-3	-21	intron_retention	FALSE	canonical	0	0	junction_6	53.5730436499286	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599390	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607197_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24612454_24613565_24613817_24614351
ES.25550.11	chr5	+	4807	11	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	1	-21	intron_retention	FALSE	canonical	3	14	junction_3	56.2139662361588	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599394	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605679_24605754_24605798_24605972_24606079_24606760_24606923_24607042_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24613817_24614351
ES.25550.12	chr5	+	2903	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	1	-23	intron_retention	FALSE	canonical	3	14	junction_3	48.1987805756493	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAACAAAAAGAAAAACCTA	NA	False	NA	-15	True	NA	NA	NA	24599394	24614899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605679_24605754_24605798_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.13	chr5	+	3012	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	51.3581362908089	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	False	NA	30	True	AATAAA	-20	NA	24599395	24614944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605679_24605741_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.14	chr5	+	3372	14	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	156	junction_4	18.1971452341997	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCTGTAGCTTAG	NA	False	NA	29	True	AATAAA	-19	NA	24599398	24614943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24612454_24613565_24613817_24614351
ES.25550.15	chr5	+	3080	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	5	-21	intron_retention	FALSE	canonical	0	0	junction_12	51.8886169735576	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599398	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611927_24612305_24612454_24613565_24613817_24614351
ES.25550.16	chr5	+	1557	10	FSM	ENSMUSG00000028973.19	ENSMUST00000115074.6	1657	10	12	88	0	-88	multi-exon	FALSE	canonical	1	9	junction_9	57.8772647745017	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACATA	NA	False	NA	NA	False	NA	NA	NA	24599405	24608887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24608625
ES.25550.17	chr5	+	6363	13	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	0	4	intron_retention	FALSE	canonical	3	156	junction_3	17.0495601116275	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGTAGCTTAGTAGCAG	NA	False	NA	35	True	AATAAA	-25	NA	24599405	24614949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.18	chr5	+	3783	12	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	0	-7	intron_retention	FALSE	canonical	3	156	junction_4	16.7928556237467	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGGCCGAGGCTGT	NA	False	NA	22	True	AATAAA	-12	NA	24599405	24614936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24612454_24613565_24613817_24614351
ES.25550.19	chr5	+	6112	9	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	156	junction_3	17.8916006830021	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGGCCGAGGCTGTA	NA	False	NA	23	True	AATAAA	-13	NA	24599406	24614937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397
ES.25550.2	chr5	+	3597	13	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-12	-21	intron_retention	FALSE	canonical	3	14	junction_3	51.757178782808	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599381	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605679_24605754_24605798_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24612454_24613565_24613817_24614351
ES.25550.21	chr5	+	3608	13	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	1	2	intron_retention	FALSE	canonical	3	156	junction_3	18.7897726318217	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGCTGTAGCTTAGTAGC	NA	False	NA	33	True	AATAAA	-23	NA	24599406	24614947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24612454_24613565_24613817_24614351
ES.25550.22	chr5	+	2858	17	NNC	ENSMUSG00000028973.19	novel	3074	17	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	64.2660181880751	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAAATTTTCAAAGAG	NA	False	NA	11	True	AATAAA	-1	NA	24599407	24614925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24613959_24614152_24614351
ES.25550.24	chr5	+	8557	4	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	199	junction_2	2.44948974278318	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	False	NA	30	True	AATAAA	-20	NA	24599411	24614944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24612454_24613565_24613817_24614351
ES.25550.25	chr5	+	4596	13	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	6	-4	intron_retention	FALSE	canonical	3	156	junction_3	18.7932833746528	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGCCGAGGCTGTAGC	NA	False	NA	25	True	AATAAA	-15	NA	24599411	24614939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24613817_24614351
ES.25550.26	chr5	+	4243	10	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	6	-21	intron_retention	FALSE	canonical	0	0	junction_7	61.9529889473153	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599411	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24611115_24611253_24611397_24612454_24613565
ES.25550.27	chr5	+	2608	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	7	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.0478897991881	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599412	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605221_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611927_24612305_24612454_24613565_24613817_24614351
ES.25550.28	chr5	+	2390	14	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	53.1739358673147	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGCCGAGGCTGTAGC	NA	False	NA	25	True	AATAAA	-15	NA	24599415	24614939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24613565_24613817_24614351
ES.25550.29	chr5	+	3205	15	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	265	4	12	-4	intron_retention	FALSE	canonical	3	156	junction_4	17.2852715409651	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGCCGAGGCTGTAGC	NA	False	NA	25	True	AATAAA	-15	NA	24599417	24614939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565
ES.25550.3	chr5	+	2823	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	229	-113	-12	4	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGGCTCTGCCTCACC	NA	False	NA	NA	False	AATAAA	-24	NA	24599381	24615056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.30	chr5	+	3764	11	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	15	-21	intron_retention	FALSE	canonical	3	156	junction_3	19.8919581740964	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAGAAAAACCTAAA	NA	False	NA	-13	True	NA	NA	NA	24599420	24614901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605221_24605522_24605850_24605972_24606079_24606760_24606923_24607042_24607338_24608070_24608177_24610812_24611253_24611397_24612454_24613565_24613817_24614351
ES.25550.32	chr5	+	3610	10	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-390	0	intron_retention	FALSE	canonical	3	156	junction_2	20.9343476989432	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCTGTAGCTTAG	NA	False	NA	29	True	AATAAA	-19	NA	24605205	24614943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24612454_24613565_24613817_24614351
ES.25550.33	chr5	+	2861	6	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	136	0	intron_retention	FALSE	canonical	3	189	junction_2	6.11882341631134	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24607387	24614945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24608177_24610812_24610847_24611115_24611253_24611397_24612454_24613565_24613817_24614351
ES.25550.34	chr5	+	3962	4	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-1355	0	intron_retention	FALSE	canonical	3	189	junction_1	4.10960933531265	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24609457	24614945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24610847_24611115_24611253_24611397_24612454_24613565
ES.25550.35	chr5	+	1133	1	NIC	ENSMUSG00000028973.19	novel	3074	17	NA	NA	260	1089	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTTCTGGTTTCCTTG	NA	False	NA	NA	False	AAGAAA	-24	NA	24611665	24612798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24611700_24612800
ES.25550.4	chr5	+	2659	16	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	46.5873611854355	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24599382	24614945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605798_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.5	chr5	+	2708	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	231	0	-10	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCTGTAGCTTAG	NA	False	NA	29	True	AATAAA	-19	NA	24599383	24614943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.6	chr5	+	3013	15	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-10	1	intron_retention	FALSE	canonical	3	156	junction_3	17.6207206412895	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGGCTGTAGCTTAGTAG	NA	False	NA	32	True	AATAAA	-22	NA	24599383	24614946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.7	chr5	+	3085	14	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	156	junction_2	17.7177075199732	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGAGGCTGTAGCTTA	NA	False	NA	28	True	AATAAA	-18	NA	24599383	24614942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24599582_24604910_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25550.8	chr5	+	2818	15	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	-9	-4	intron_retention	FALSE	canonical	0	0	junction_5	51.2795957352972	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGCCGAGGCTGTAGC	NA	False	NA	25	True	AATAAA	-15	NA	24599384	24614939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606083_24606760_24606923_24607042_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ES.25551.1	chr5	-	2052	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-54	11	at_least_one_novel_splicesite	TRUE	non_canonical	2	2	junction_7	56.3574307434255	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGCCTATAATCTCAA	NA	False	NA	0	True	TATAAA	-16	NA	24628582	24623227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626034_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.10	chr5	-	1443	10	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-44	190	intron_retention	FALSE	canonical	0	0	junction_2	57.9290754093122	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGATGATATGGTGGTG	NA	False	NA	-10	True	CATAAA	-17	NA	24628572	24624183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24625019_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.11	chr5	-	1145	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-31	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.4982486917657	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTGATGATATGGTG	NA	False	NA	-13	True	CATAAA	-14	NA	24628559	24624186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625245_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.12	chr5	-	1477	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-29	186	intron_retention	FALSE	canonical	0	0	junction_3	55.0178152965019	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTCTGATGATATGGT	NA	False	NA	-14	True	CATAAA	-13	NA	24628557	24624187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624834_24625019_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.13	chr5	-	1127	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-32	186	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_7	53.7407305095723	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTCTGATGATATGGT	NA	False	NA	-14	True	CATAAA	-13	NA	24628560	24624187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626034_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.2	chr5	-	2625	10	NIC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-32	10	intron_retention	FALSE	canonical	3	157	junction_6	15.3075467549285	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCATGCCTATAATCTCA	NA	False	NA	-1	True	TATAAA	-15	NA	24628560	24623228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24624461_24624597_24624679_24624780_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.3	chr5	-	2049	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGGTCTGGGAAGCCA	NA	False	NA	-19	True	NA	NA	NA	24628526	24623246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.5	chr5	-	1710	10	NIC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-40	190	intron_retention	FALSE	canonical	3	152	junction_6	16.739839372653	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGATGATATGGTGGTG	NA	False	NA	-10	True	CATAAA	-17	NA	24628568	24624183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24624461_24624597_24624679_24624780_24625327_24625490_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.6	chr5	-	1166	12	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-52	190	at_least_one_novel_splicesite	FALSE	non_canonical	2	111	junction_3	23.9707121571787	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGATGATATGGTGGTG	NA	False	NA	-10	True	CATAAA	-17	NA	24628580	24624183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.7	chr5	-	1265	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-10	190	intron_retention	FALSE	non_canonical	2	111	junction_3	25.0710988989314	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGATGATATGGTGGTG	NA	False	NA	-10	True	CATAAA	-17	NA	24628538	24624183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ES.25551.8	chr5	-	1268	11	NNC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	-45	190	intron_retention	FALSE	non_canonical	2	111	junction_3	24.5277393984851	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGATGATATGGTGGTG	NA	False	NA	-10	True	CATAAA	-17	NA	24628573	24624183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24624461_24624597_24624679_24624780_24624841_24625255_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
ES.25552.1	chr5	+	4563	23	NIC	ENSMUSG00000028962.15	novel	966	4	NA	NA	-57	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.9707537579024	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTGGTCTTGTGTCTT	NA	False	NA	9	True	AGTAAA	-18	NA	24628777	24645947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24629367_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.10	chr5	+	4021	22	FSM	ENSMUSG00000028962.15	ENSMUST00000115049.9	3924	22	-99	2	-99	-2	multi-exon	FALSE	canonical	0	0	junction_1	10.8604840305893	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTAGGCTTGGTCTTGTG	NA	False	NA	5	True	AGTAAA	-14	NA	24633106	24645943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24633272_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.2	chr5	+	4152	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	24	3	-20	0	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24630253	24645945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.3	chr5	+	4132	23	NNC	ENSMUSG00000028962.15	novel	4179	23	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	10.3492723423692	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24630261	24645945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639490_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.4	chr5	+	4362	21	NIC	ENSMUSG00000028962.15	novel	4179	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	23	junction_2	8.45739321540627	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTAGGCTTGGTCTTGTG	NA	False	NA	5	True	AGTAAA	-14	NA	24630270	24645943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.6	chr5	+	4262	22	NIC	ENSMUSG00000028962.15	novel	4179	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_2	8.25363247180245	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24630274	24645945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.7	chr5	+	3079	18	NNC	ENSMUSG00000028962.15	novel	4179	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.9595627791534	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24630274	24645945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24630434_24632520_24632635_24637908_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25552.8	chr5	+	4634	22	ISM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	1629	3	30	0	3prime_fragment	FALSE	canonical	3	23	junction_1	7.88983099353693	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	False	NA	7	True	AGTAAA	-16	NA	24631858	24645945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ES.25553.1	chr5	-	4851	11	NNC	ENSMUSG00000028959.15	novel	3056	10	NA	NA	1	1681	intron_retention	FALSE	canonical	0	0	junction_1	372.420045110357	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTTTGAAAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	24650194	24641756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24644917_24646147_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.10	chr5	-	3273	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1095	junction_1	123.795255588098	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650297	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24648142_24648274_24648455_24648892
ES.25553.11	chr5	-	3331	6	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1099	junction_4	131.59331290001	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650183	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.12	chr5	-	3440	3	NIC	ENSMUSG00000028959.15	novel	3642	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1128	junction_2	23.5	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650184	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646822_24646921_24647394_24648001
ES.25553.13	chr5	-	4022	3	NIC	ENSMUSG00000028959.15	novel	430	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	73	junction_2	551	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650239	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646822_24646921_24647099_24647179
ES.25553.14	chr5	-	3467	5	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	147.332107838041	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650192	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24648455_24648892
ES.25553.15	chr5	-	1979	9	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_8	410.535911188047	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
ES.25553.17	chr5	-	1955	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	1073	junction_8	121.867179236249	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650280	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.18	chr5	-	2709	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650244	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.19	chr5	-	2890	5	NNC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-2	0	intron_retention	FALSE	canonical	1	15	junction_3	496.493391194687	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650208	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646822_24646921_24647394_24648001_24648140_24648274_24648455_24648892
ES.25553.2	chr5	-	5561	8	Fusion	ENSMUSG00000088696.3_ENSMUSG00000028959.15	novel	2552	9	NA	NA	3	593	intron_retention	FALSE	canonical	2	4	junction_7	440.938886968269	778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	24650181	24642844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648892
ES.25553.21	chr5	-	2791	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1099	junction_4	137.581394090916	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.22	chr5	-	1902	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	73	junction_4	384.450724248245	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650210	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.23	chr5	-	1808	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_5	369.485762100601	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.25	chr5	-	2744	7	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1095	junction_1	132.996762700785	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650211	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.26	chr5	-	1851	10	NNC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	2	0	intron_retention	FALSE	canonical	1	7	junction_9	390.447321813214	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650182	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650091
ES.25553.27	chr5	-	2665	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-113	0	-13	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650298	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.29	chr5	-	1881	10	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
ES.25553.3	chr5	-	1880	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	17	-4	17	4	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTCTGGGATAA	NA	False	NA	0	True	NA	NA	NA	24650268	24646032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.31	chr5	-	1639	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_8	385.13377505921	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650213	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24649073_24649304_24650063
ES.25553.32	chr5	-	2508	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1073	junction_7	131.796224900257	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650195	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.33	chr5	-	3348	7	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	1095	junction_1	131.722456534774	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650275	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.35	chr5	-	1933	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1073	junction_8	121.685044274142	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650193	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648455_24648892_24649304_24650063
ES.25553.36	chr5	-	1761	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	497.895348218657	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649257_24650063
ES.25553.37	chr5	-	3220	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	138.525087980481	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001
ES.25553.38	chr5	-	1780	10	NNC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	392.555382583224	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649288_24650058
ES.25553.39	chr5	-	1698	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	431.526999178972	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650183	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.4	chr5	-	3478	4	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	1099	junction_2	36.8057966449127	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTCTTGTTTCTGGGA	NA	False	NA	-3	True	NA	NA	NA	24650184	24646035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.41	chr5	-	1760	11	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_9	338.558414457535	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650237	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24648990_24649073_24649304_24650063
ES.25553.42	chr5	-	2740	7	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	73	junction_3	397.220516701855	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650211	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.43	chr5	-	3528	4	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1099	junction_2	164.495187366277	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650213	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24648142_24648274_24648455_24648892
ES.25553.44	chr5	-	1938	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	1073	junction_8	125.284675838668	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650233	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.45	chr5	-	3422	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	1095	junction_1	158.034015325815	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650181	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24648142_24648274_24648455_24648892
ES.25553.46	chr5	-	3232	7	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	1099	junction_5	124.234209817139	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650183	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24648142_24648274_24648455_24648892
ES.25553.47	chr5	-	1622	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	412.576489120502	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650195	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648892_24649304_24650063
ES.25553.48	chr5	-	2355	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	1073	junction_7	129.945514484702	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650177	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24649304_24650063
ES.25553.49	chr5	-	2098	8	NNC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-153	0	intron_retention	FALSE	canonical	3	119	junction_7	402.720189486954	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24649109	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24648892_24648990_24649073
ES.25553.5	chr5	-	3441	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	21	1	intron_retention	FALSE	canonical	3	1095	junction_1	149.521737550097	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTCTTGTTTCTGGGA	NA	False	NA	-3	True	NA	NA	NA	24650163	24646035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24647082_24647179_24648455_24648892
ES.25553.50	chr5	-	4059	2	ISM	ENSMUSG00000028959.15	ENSMUST00000139307.2	811	4	42	-1031	1	0	intron_retention	FALSE	canonical	3	1155	junction_1	0	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650194	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24647082_24647179
ES.25553.52	chr5	-	2834	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	1128	junction_4	46.366367121007	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650183	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648455_24648892
ES.25553.53	chr5	-	3081	4	FSM	ENSMUSG00000028959.15	ENSMUST00000132498.2	856	4	-1341	-884	-12	0	multi-exon	FALSE	canonical	3	1099	junction_2	33.0689515339624	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650297	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.54	chr5	-	2730	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-6	0	intron_retention	FALSE	canonical	1	3	junction_1	491.150371576771	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650212	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646525_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.55	chr5	-	3024	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_1	566.37408132788	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001
ES.25553.57	chr5	-	2895	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1099	junction_3	152.393200307625	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650188	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.58	chr5	-	1956	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	1073	junction_7	128.672817166451	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650177	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.59	chr5	-	2426	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_4	570.74091100954	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650181	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24647394_24648892
ES.25553.6	chr5	-	3622	2	ISM	ENSMUSG00000028959.15	ENSMUST00000132498.2	856	4	-1310	-885	19	0	intron_retention	FALSE	canonical	3	1128	junction_1	0	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650266	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24647394_24648001
ES.25553.60	chr5	-	1753	11	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	372.420045110357	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650184	24646037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649029_24649066_24649304_24650063
ES.25553.61	chr5	-	2873	4	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1073	junction_3	45.675181687895	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650183	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24648455_24648892_24649304_24650063
ES.25553.62	chr5	-	3536	4	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	4	-1	intron_retention	FALSE	canonical	3	1175	junction_2	41.9867704031745	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650180	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646662_24646729_24646822_24646921_24648455_24648892
ES.25553.63	chr5	-	3468	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1175	junction_3	124.230380744808	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650189	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24648455_24648892
ES.25553.64	chr5	-	3932	4	ISM	ENSMUSG00000028959.15	ENSMUST00000132109.8	828	5	-3008	2	15	-1	intron_retention	FALSE	canonical	3	1095	junction_1	166.343687052507	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650221	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921
ES.25553.65	chr5	-	2692	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1095	junction_1	126.599319726063	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650226	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.66	chr5	-	3761	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1095	junction_1	158.261650440023	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650183	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24648142_24648274
ES.25553.68	chr5	-	2960	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	1099	junction_3	63.4152978389284	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650245	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646662_24646729_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.69	chr5	-	3987	3	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	13	-1	intron_retention	FALSE	canonical	3	1155	junction_2	10	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAAGTCTTGTTTCTG	NA	False	NA	-6	True	NA	NA	NA	24650223	24646038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646822_24646921_24647082_24647179
ES.25553.7	chr5	-	3442	5	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	1099	junction_3	146.406113260342	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650226	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.70	chr5	-	3410	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	1099	junction_3	148.643028763545	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650195	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24647082_24647179_24648142_24648274_24648455_24648892
ES.25553.72	chr5	-	2997	8	ISM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	-9	2	1	1	intron_retention	FALSE	canonical	3	1095	junction_1	126.703736072358	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650194	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274
ES.25553.73	chr5	-	2313	8	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	1	intron_retention	FALSE	canonical	2	18	junction_6	433.441331387654	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24649073_24649304_24650063
ES.25553.74	chr5	-	1739	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	392.555382583224	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650181	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649257_24650063
ES.25553.75	chr5	-	1929	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-11	1	intron_retention	FALSE	canonical	3	14	junction_9	494.956813180282	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650217	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
ES.25553.76	chr5	-	3405	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	1099	junction_3	59.1243393197759	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646662_24646729_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.77	chr5	-	2028	7	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	1073	junction_6	135.914699556581	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ES.25553.78	chr5	-	2855	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	13	1	intron_retention	FALSE	canonical	3	1099	junction_3	29.8778764305631	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650171	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ES.25553.79	chr5	-	2407	9	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	1	intron_retention	FALSE	canonical	1	7	junction_8	383.626445907995	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24649521
ES.25553.8	chr5	-	4194	1	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	778	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650230	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646000_24650200
ES.25553.80	chr5	-	3213	8	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	13	1	intron_retention	FALSE	canonical	3	73	junction_5	418.089483635418	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650223	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24648142_24648274_24648455_24648892
ES.25553.81	chr5	-	3767	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	1099	junction_4	143.119486793378	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650184	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24648142_24648274
ES.25553.82	chr5	-	1881	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	164	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	392.555382583224	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650020	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24649807
ES.25553.83	chr5	-	1537	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	392.555382583224	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650194	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649042_24650063
ES.25553.84	chr5	-	2329	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	390.447321813214	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650182	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24649521
ES.25553.85	chr5	-	3296	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	-3	1	intron_retention	FALSE	canonical	3	1128	junction_4	135.555339253015	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650188	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001
ES.25553.86	chr5	-	4106	2	NNC	ENSMUSG00000028959.15	novel	474	2	NA	NA	10	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650226	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646445_24646525
ES.25553.87	chr5	-	3350	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	8	1	intron_retention	FALSE	canonical	3	1095	junction_1	135.375034626034	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650176	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24648455_24648892
ES.25553.88	chr5	-	3316	5	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	1095	junction_1	151.905398192428	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650182	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24647394_24648001
ES.25553.89	chr5	-	1837	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	391.952976519466	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650014
ES.25553.9	chr5	-	3408	6	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	19	0	intron_retention	FALSE	canonical	3	1095	junction_1	142.186356588809	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650266	24646036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24648142_24648274_24648455_24648892
ES.25553.90	chr5	-	3299	6	NIC	ENSMUSG00000028959.15	novel	2552	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	1099	junction_4	134.661650071578	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650184	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646822_24646921_24647082_24647179_24648142_24648274_24648455_24648892
ES.25553.91	chr5	-	1927	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	8	1	intron_retention	FALSE	canonical	2	14	junction_8	529.425145204683	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650176	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649257_24649372_24649394_24650063
ES.25553.92	chr5	-	3573	3	NIC	ENSMUSG00000028959.15	novel	856	4	NA	NA	1	1	intron_retention	FALSE	canonical	3	1099	junction_1	40	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTAAGTCTTGTTTCT	NA	False	NA	-7	True	NA	NA	NA	24650183	24646039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24648142_24648274_24648455_24648892
ES.25553.94	chr5	-	3824	5	ISM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	2	3	1	0	intron_retention	FALSE	canonical	3	1095	junction_1	144.217500671728	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCTAAGTCTTGTTTC	NA	False	NA	-8	True	NA	NA	NA	24650183	24646040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921
ES.25553.95	chr5	-	1617	10	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	390.519913025105	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCTAAGTCTTGTTTC	NA	False	NA	-8	True	NA	NA	NA	24650188	24646040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648461_24649073_24649304_24650063
ES.25554.1	chr5	-	1338	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	-11	6	-11	2	multi-exon	FALSE	canonical	3	68	junction_2	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTGTGTCTGTGTGTT	NA	False	NA	-2	True	ATTAAA	-20	NA	24652863	24650461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24651272_24651531_24651951_24652754
ES.25554.2	chr5	-	1080	3	NNC	ENSMUSG00000028958.16	novel	1333	3	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTGTGTCTGTGTGTT	NA	False	NA	-2	True	ATTAAA	-20	NA	24652787	24650461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24651172_24651613_24651951_24652754
ES.25555.1	chr5	+	3321	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-423	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656751	24707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.10	chr5	+	3000	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-308	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	45.1661861905563	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656866	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394_24706705_24706902
ES.25555.12	chr5	+	3295	17	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-267	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	49.616655469711	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656907	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.15	chr5	+	3479	18	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-251	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.8679618155175	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656923	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24682976_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704657_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.16	chr5	+	3238	15	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-233	0	intron_retention	FALSE	canonical	3	94	junction_11	25.0107119907794	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	False	NA	11	True	AATAAA	-17	NA	24656941	24707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705344_24706007_24706264_24706394
ES.25555.17	chr5	+	2269	10	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-232	7374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.9875637388166	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAATGTGGCTTAATCA	NA	False	NA	NA	False	ATTAAA	-16	NA	24656942	24695556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24694813
ES.25555.18	chr5	+	2954	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1661861905563	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	False	NA	11	True	AATAAA	-17	NA	24656944	24707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657118_24657281_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.2	chr5	+	3258	16	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-332	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.9001490755317	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656842	24707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681432_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24682976_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.20	chr5	+	4681	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.4299952642971	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTTGGTGCCTCAGT	NA	False	NA	18	True	AATAAA	-24	NA	24656944	24707042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24678624_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.21	chr5	+	2135	10	NNC	ENSMUSG00000023353.15	novel	1061	9	NA	NA	-222	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.7149824918578	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTCGTGTCTTGGTTCCT	NA	False	NA	10	True	AATAAA	-10	NA	24656952	24688177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657128_24657283_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
ES.25555.22	chr5	+	3119	18	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-216	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.2315846726843	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	False	NA	11	True	AATAAA	-17	NA	24656958	24707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657119_24657274_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.24	chr5	+	2808	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-213	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1661861905563	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTTCTCCTTTGGTGC	NA	False	NA	12	True	AATAAA	-18	NA	24656961	24707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24656982_24657275_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.25	chr5	+	7163	18	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-212	0	intron_retention	FALSE	canonical	0	0	junction_10	63.9695537441709	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656962	24707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24695056_24695195_24697955_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.26	chr5	+	3219	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-191	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.9368932007059	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656983	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24695056_24695195_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.29	chr5	+	2936	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-5	42663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.1661861905563	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAGAAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	24657169	24749708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394_24707041_24749670
ES.25555.3	chr5	+	3141	19	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-330	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	57.3690672448421	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656844	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24656905_24657292_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.30	chr5	+	3889	18	NIC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	-80	1	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	56.5819979441296	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTTCTCCTTTGGTGC	NA	False	NA	12	True	AATAAA	-18	NA	24679131	24707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.31	chr5	+	3534	15	NIC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	82	0	intron_retention	FALSE	canonical	2	13	junction_1	44.8878989192829	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	False	NA	11	True	AATAAA	-17	NA	24679293	24707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705344_24706007_24706264_24706394
ES.25555.33	chr5	+	2723	3	NIC	ENSMUSG00000023353.15	novel	2685	9	NA	NA	-1909	-4	intron_retention	FALSE	canonical	3	38	junction_2	68.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTCGTGTCTTGGTTCC	NA	False	NA	9	True	AATAAA	-9	NA	24682841	24688176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24682872_24683007_24684788_24687263
ES.25555.34	chr5	+	1947	10	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	7651	42656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.5815797534995	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAGAAAAAGAA	6841	False	NA	NA	False	NA	NA	NA	24692820	24749701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394_24707037_24749670
ES.25555.35	chr5	+	6324	5	ISM	ENSMUSG00000023353.15	ENSMUST00000197513.2	1770	9	14949	-2	14530	2	3prime_fragment	FALSE	canonical	3	144	junction_1	10.7092249953019	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	2614	False	NA	13	True	AATAAA	-19	NA	24699699	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.36	chr5	+	2957	6	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	16453	-2	intron_retention	FALSE	canonical	3	44	junction_1	47.8681522517843	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGTGCCTCAGTG	4537	False	NA	19	True	AATAAA	-25	NA	24701622	24707043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.37	chr5	+	4200	5	NNC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	16647	-3	intron_retention	FALSE	canonical	0	0	junction_3	69.5678625516122	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCCTTTCTCCTTTG	4731	False	NA	8	True	AATAAA	-14	NA	24701816	24707032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24704811_24704912_24705004_24705120_24705344_24706009_24706264_24706394
ES.25555.38	chr5	+	174	1	Intergenic	novelGene_21283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATGTAATTAAAGCA	2606	False	NA	NA	False	NA	NA	NA	24712185	24712359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24712200_24712400
ES.25555.4	chr5	+	3389	17	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-328	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	49.5961424281163	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656846	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.5	chr5	+	3526	18	FSM	ENSMUSG00000023353.15	ENSMUST00000024123.9	3207	18	-327	8	-327	2	multi-exon	FALSE	canonical	3	41	junction_12	48.4543090880899	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656847	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.7	chr5	+	3056	17	NNC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-324	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1661861905563	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTCTCCTTTGGTGCC	NA	False	NA	13	True	AATAAA	-19	NA	24656850	24707037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24657118_24657275_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ES.25555.9	chr5	+	2383	9	FSM	ENSMUSG00000023353.15	ENSMUST00000199647.2	1061	9	-467	-855	-310	1	multi-exon	FALSE	canonical	3	38	junction_8	47.1665930505904	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTCTTGGTTCCTTCCC	NA	False	NA	14	True	AATAAA	-14	NA	24656864	24688181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
ES.25556.1	chr5	-	179	1	Intergenic	novelGene_21282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAACACATAA	7871	False	NA	NA	False	NA	NA	NA	24677555	24677376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24677400_24677600
ES.25557.1	chr5	-	2711	1	NIC	ENSMUSG00000067724.6	novel	3475	2	NA	NA	21735	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCTCTCACTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	24710465	24707754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24707800_24710500
ES.25557.2	chr5	-	3132	2	FSM	ENSMUSG00000067724.6	ENSMUST00000088311.6	3475	2	321	22	321	-22	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAATCA	NA	False	NA	NA	False	NA	NA	NA	24731879	24707776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24710138_24731108
ES.25557.3	chr5	-	2511	2	NNC	ENSMUSG00000067724.6	novel	3475	2	NA	NA	14793	-22	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAATCA	NA	False	NA	NA	False	NA	NA	NA	24717407	24707776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24710135_24717254
ES.25557.4	chr5	-	1076	2	NNC	ENSMUSG00000067724.6	novel	3475	2	NA	NA	14799	-1454	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTATTTTGTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	24717401	24709208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24710138_24717254
ES.25557.5	chr5	-	3340	2	Intergenic	novelGene_21284	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAGAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24716627	24713235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24716297_24716348
ES.25557.6	chr5	-	3101	2	Intergenic	novelGene_21285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24718718	24713240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24714753_24717129
ES.25558.1	chr5	-	1106	2	ISM	ENSMUSG00000038204.14	ENSMUST00000048302.13	2327	6	6523	-10	6523	10	3prime_fragment	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTGTGTGCATACT	NA	False	NA	NA	False	NA	NA	NA	24738932	24737684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24738510_24738651
ES.25559.1	chr5	-	3004	15	NNC	ENSMUSG00000038199.13	novel	2613	19	NA	NA	968	1004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.479157423749955	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTTTGTCAAATTTG	1186	False	NA	NA	False	NA	NA	NA	24756663	24747425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24748645_24749126_24749372_24749916_24750095_24750348_24750436_24750721_24750922_24751586_24751695_24751844_24751928_24753087_24753147_24753240_24753325_24753931_24754039_24754410_24754487_24754625_24754761_24755120_24755206_24755597_24755804_24756531
ES.2556.1	chr10	-	156	1	Intergenic	novelGene_1939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	32979401	32979245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_32979200_32979400
ES.25560.1	chr5	+	4431	1	Antisense	novelGene_ENSMUSG00000028953.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	24770478	24774909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24770500_24774900
ES.25561.1	chr5	-	3525	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	-52	-904	-52	904	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTGTGACTCTAGAG	NA	False	NA	5	True	NA	NA	NA	24782517	24769438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.10	chr5	-	2548	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	110	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	415.303809804184	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782355	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782257
ES.25561.11	chr5	-	1875	13	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	423.535737374467	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782373	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24770673_24772252_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.12	chr5	-	3463	12	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	84	2	intron_retention	FALSE	canonical	3	1197	junction_11	118.63779170161	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782381	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.14	chr5	-	2761	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	131	2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_13	407.745207018003	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782334	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782023
ES.25561.16	chr5	-	2264	12	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	740	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	441.684248311632	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24781725	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772549_24773626_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516
ES.25561.18	chr5	-	2470	12	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	112	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	448.294546029728	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782353	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778752_24781888
ES.25561.19	chr5	-	2539	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	60	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	417.858728710749	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782405	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777125_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.2	chr5	-	3292	13	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	69	894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	425.623268474207	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTTTGT	NA	False	NA	-5	True	NA	NA	NA	24782396	24769448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773555_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.20	chr5	-	6358	9	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	58	2	intron_retention	FALSE	canonical	3	1197	junction_8	113.258277843167	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782407	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24772311_24772498_24773655_24773735_24773856_24774068_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.23	chr5	-	2490	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.31285340877	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782390	24770342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24770993_24771471_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.26	chr5	-	2729	13	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	91	0	intron_retention	FALSE	canonical	3	1197	junction_12	119.967356671166	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782374	24770342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.27	chr5	-	4232	10	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	92	0	intron_retention	FALSE	canonical	0	0	junction_7	467.014896529272	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782373	24770342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24772311_24772498_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778662_24779164_24779378_24781516_24781726_24782344
ES.25561.28	chr5	-	2659	4	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	8693	-1	intron_retention	FALSE	canonical	3	1440	junction_3	81.955272354295	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCCTGGGTCTCTGAG	NA	False	NA	-30	True	AATAAA	-20	NA	24773772	24770343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24771681_24772181_24772311_24772498_24773655_24773735
ES.25561.3	chr5	-	2918	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	-320	-29	-320	29	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCAGTCGGCATTCAC	NA	False	NA	0	True	NA	NA	NA	24782785	24770313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.31	chr5	-	2515	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	413.31285340877	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTCCTGGGTCTCTGA	NA	False	NA	-31	True	AATAAA	-19	NA	24782400	24770344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771015_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.33	chr5	-	2483	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	73	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	413.31285340877	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCTCCTTCCTGGGTCT	NA	False	NA	-35	True	AATAAA	-15	NA	24782392	24770348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771483_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.4	chr5	-	2525	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	58	5	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	405.416244569636	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCTCTGAGCCTTTT	NA	False	NA	-24	True	AATAAA	-26	NA	24782407	24770337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781507_24781726_24782344
ES.25561.6	chr5	-	2556	15	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	72	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	540.128919796006	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782393	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24775989_24776047_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.7	chr5	-	3260	13	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	67	2	intron_retention	FALSE	canonical	3	1197	junction_12	125.17742963046	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782398	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.8	chr5	-	3422	12	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	41	2	intron_retention	FALSE	canonical	3	1197	junction_11	122.477658613741	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782424	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25561.9	chr5	-	2390	13	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	101	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	562.828046318076	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGGTCTCTGAGCCT	NA	False	NA	-27	True	AATAAA	-23	NA	24782364	24770340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773564_24773655_24773735_24773856_24774068_24774196_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ES.25562.1	chr5	-	172	1	Intergenic	novelGene_21286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGACAAAT	NA	False	NA	NA	False	NA	NA	NA	24786384	24786212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24786200_24786400
ES.25563.1	chr5	-	497	1	FSM	ENSMUSG00000067719.6	ENSMUST00000088299.6	309	1	-43	-145	-43	145	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGACAAATA	NA	False	NA	NA	False	NA	NA	NA	24786903	24786406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24786400_24786900
ES.25564.1	chr5	+	157	1	Intergenic	novelGene_21287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	24787422	24787579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24787400_24787600
ES.25565.1	chr5	+	4394	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-22	1	intron_retention	FALSE	canonical	3	41	junction_1	2.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTTAGGTCTAGGG	NA	False	NA	4	True	ATTAAA	-15	NA	24791716	24797483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24793299_24794094_24795490_24796066
ES.25565.10	chr5	+	2626	1	FSM	ENSMUSG00000076387.3	ENSMUST00000102432.3	98	1	-2252	-276	-2252	276	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24794859	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24794900_24797500
ES.25565.11	chr5	+	3768	3	NIC	ENSMUSG00000038181.17	novel	404	2	NA	NA	-245	3383	intron_retention	FALSE	canonical	1	2	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAAGCATGTGTGTTT	NA	False	NA	NA	False	AATGAA	-45	NA	24798239	24802937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24798352_24798615_24798803_24799468
ES.25565.12	chr5	+	3684	1	Genic_Genomic	ENSMUSG00000038181.17	novel	NA	NA	NA	NA	521	3135	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTTAGGCTGGATAAG	NA	False	NA	NA	False	NA	NA	NA	24799005	24802689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_24799000_24802700
ES.25565.13	chr5	+	1827	2	Antisense	novelGene_ENSMUSG00000028949.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTTAGGCTGGATAAG	NA	False	NA	NA	False	NA	NA	NA	24800130	24802689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24801073_24801804
ES.25565.14	chr5	+	1681	3	Antisense	novelGene_ENSMUSG00000028949.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTTAGGCTGGATAAG	NA	False	NA	NA	False	NA	NA	NA	24800131	24802689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_24800245_24800389_24801073_24801804
ES.25565.2	chr5	+	5188	2	Fusion	ENSMUSG00000038181.17_ENSMUSG00000076387.3	novel	494	3	NA	NA	-18	3	intron_retention	FALSE	canonical	3	46	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24791720	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_24795490_24796066
ES.25565.3	chr5	+	7457	2	Fusion	ENSMUSG00000038181.17_ENSMUSG00000076387.3	novel	529	2	NA	NA	-3	-3	intron_retention	TRUE	canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATCTATCTACTGTGT	NA	False	NA	NA	False	NA	NA	NA	24791735	24799390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_24793428_24793625
ES.25565.4	chr5	+	4526	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	11.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24791735	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24794660_24795306_24795490_24796066
ES.25565.5	chr5	+	3726	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	-8	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_2	9.8770215933527	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24791739	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
ES.25565.6	chr5	+	5352	5	FSM	ENSMUSG00000038181.17	ENSMUST00000088295.9	5371	5	17	2	8	-2	multi-exon	FALSE	canonical	1	3	junction_4	16.9022927438854	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATCTATCTACTGTGTT	NA	False	NA	NA	False	NA	NA	NA	24791755	24799391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066_24798352_24798615
ES.25565.7	chr5	+	4936	3	Fusion	ENSMUSG00000038181.17_ENSMUSG00000076387.3	novel	494	3	NA	NA	-8	-10	intron_retention	FALSE	canonical	0	0	junction_1	23	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTGCCAAACTGTTTT	NA	False	NA	-7	True	ATTAAA	-4	NA	24791761	24797472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_24793428_24793625_24795490_24796066
ES.25565.8	chr5	+	3138	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-7	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24791762	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24793299_24795306_24795490_24796066
ES.25565.9	chr5	+	3163	4	NNC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	-3	3	intron_retention	FALSE	non_canonical	0	0	junction_3	20.6074420214316	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTAGGTCTAGGGAG	NA	False	NA	6	True	ATTAAA	-17	NA	24791766	24797485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24793299_24794094_24795490_24796066_24796122_24797304
ES.25566.1	chr5	+	131	1	Intergenic	novelGene_21288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	24830321	24830452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24830300_24830500
ES.25567.1	chr5	-	1989	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-82	-172	-82	172	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACAGTGGCAAGC	6903	False	NA	NA	False	AAAACA	-40	NA	24807092	24797447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.10	chr5	-	4137	9	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-1345	-1	intron_retention	FALSE	canonical	3	170	junction_4	17.3956711569287	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	8714	False	NA	-1	True	ATTAAA	-16	NA	24805281	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799992_24800140_24800243_24800387_24801073_24801804_24801848_24803589
ES.25567.11	chr5	-	1707	14	FSM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	4	1	4	-1	multi-exon	FALSE	canonical	3	4	junction_12	70.4408770513493	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	646	False	NA	-1	True	ATTAAA	-16	NA	24829405	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
ES.25567.12	chr5	-	3140	12	ISM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	1571	1	1459	-1	3prime_fragment	FALSE	canonical	3	153	junction_8	20.0610638050861	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	8556	False	NA	-1	True	ATTAAA	-16	NA	24805439	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.13	chr5	-	1283	12	NNC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	297	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	57.8474768551957	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	NA	False	NA	-1	True	ATTAAA	-16	NA	24803639	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799935_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.14	chr5	-	1729	14	NNC	ENSMUSG00000028949.14	novel	1712	14	NA	NA	-13887	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.6621759062708	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	NA	False	NA	-1	True	ATTAAA	-16	NA	24843296	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24843214
ES.25567.15	chr5	-	5864	9	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	153	junction_5	23.1395224669828	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	7005	False	NA	-1	True	ATTAAA	-16	NA	24806990	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24798117_24798222_24798346_24798634_24798771_24798919_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.16	chr5	-	2918	8	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	21	-3	intron_retention	FALSE	canonical	3	170	junction_4	18.5538378229191	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCCTTGTGGTCATT	NA	False	NA	-3	True	ATTAAA	-14	NA	24803915	24797622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24800243_24800387_24801073_24801804_24801848_24803589
ES.25567.17	chr5	-	2571	9	NNC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	194	-3	intron_retention	FALSE	canonical	0	0	junction_5	68.4634939219435	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCCTTGTGGTCATT	NA	False	NA	-3	True	ATTAAA	-14	NA	24803742	24797622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24800243_24800387_24800504_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.18	chr5	-	1745	14	NNC	ENSMUSG00000028949.14	novel	1712	14	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	83.0947986466673	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACAGCAGCCTTGTGG	621	False	NA	-8	True	ATTAAA	-9	NA	24829430	24797627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800504_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
ES.25567.19	chr5	-	1518	6	NIC	ENSMUSG00000028949.14	novel	3774	12	NA	NA	155	303	intron_retention	FALSE	canonical	3	190	junction_4	4.2614551505325	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTAGTTGGTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	24803781	24799389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24799992_24800140_24800243_24800387_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.2	chr5	-	1684	11	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	232	172	intron_retention	FALSE	canonical	3	153	junction_8	21.0401996188249	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACAGTGGCAAGC	NA	False	NA	NA	False	AAAACA	-40	NA	24803704	24797447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24801073_24801804_24801848_24803589
ES.25567.20	chr5	-	2044	6	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-168	303	intron_retention	FALSE	canonical	3	54	junction_5	57.052256747652	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTAGTTGGTATTT	6817	False	NA	NA	False	AATAAA	-21	NA	24807178	24799389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24799992_24800140_24800243_24800387_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.3	chr5	-	3010	10	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-77	0	intron_retention	FALSE	canonical	3	54	junction_9	48.3735464897913	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6908	False	NA	0	True	ATTAAA	-17	NA	24807087	24797619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24800243_24800387_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.4	chr5	-	1995	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	-261	1	-261	-1	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6724	False	NA	-1	True	ATTAAA	-16	NA	24807271	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.5	chr5	-	1286	11	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	189	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	61.6863842350968	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	NA	False	NA	-1	True	ATTAAA	-16	NA	24803747	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589
ES.25567.6	chr5	-	2749	11	NIC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-54	-1	intron_retention	FALSE	canonical	3	54	junction_10	46.7462297944979	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6931	False	NA	-1	True	ATTAAA	-16	NA	24807064	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.7	chr5	-	2048	12	NNC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-85	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	68.4601591323724	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6900	False	NA	-1	True	ATTAAA	-16	NA	24807095	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800148_24800243_24800387_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ES.25567.8	chr5	-	1894	14	NNC	ENSMUSG00000028949.14	novel	1735	13	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	72.1812314768513	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTTGTGGTCATTGT	6958	False	NA	-1	True	ATTAAA	-16	NA	24807037	24797620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806133_24806267_24806778
ES.25568.1	chr5	-	177	1	Intergenic	novelGene_21289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAATAGGGCAT	NA	False	NA	NA	False	NA	NA	NA	24848591	24848414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24848400_24848600
ES.25569.1	chr5	+	175	1	Intergenic	novelGene_21290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	6626	False	NA	NA	False	NA	NA	NA	24849620	24849795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24849600_24849800
ES.2557.1	chr10	+	170	1	Intergenic	novelGene_1940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	32979932	32980102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_32979900_32980100
ES.25570.1	chr5	+	1176	1	FSM	ENSMUSG00000038165.9	ENSMUST00000182745.2	1051	1	12	-137	12	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCAGTGTTGTTTCTTGTG	9699	False	NA	NA	False	AATACA	-31	NA	24852693	24853869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24852700_24853900
ES.25571.1	chr5	+	3394	3	Intergenic	novelGene_21291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGGGAAAAGAGTTCGA	NA	False	NA	NA	False	NA	NA	NA	24857935	24865675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24858571_24859308_24861379_24864986
ES.25572.1	chr5	+	165	1	Intergenic	novelGene_21292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTGTTTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	24874776	24874941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24874800_24874900
ES.25573.1	chr5	+	177	1	Intergenic	novelGene_21293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	24886186	24886363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24886200_24886400
ES.25574.1	chr5	+	171	1	Intergenic	novelGene_21294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTGATGAAATGTT	NA	False	NA	NA	False	NA	NA	NA	24888355	24888526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24888400_24888500
ES.25575.1	chr5	+	4159	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	-845	-45	-553	45	multi-exon	TRUE	canonical	3	384	junction_1	91.6660977100463	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTGTGTTGGGAGTG	NA	False	NA	56	True	NA	NA	NA	24889976	24915421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.10	chr5	+	3051	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.29999334426	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAATGTCTGGTCTGAC	NA	False	NA	4	True	AATAAA	-13	NA	24890972	24915369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24892431_24892503_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.12	chr5	+	5526	12	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	-4	-596	intron_retention	FALSE	canonical	1	1	junction_5	215.891310272645	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTAAGGTTGCAAAAT	NA	False	NA	1	True	AGTAAA	-10	NA	24890980	24914778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24901948_24902186_24902329_24902422_24903662_24903770_24906347_24908570_24911435_24912862_24913680_24913859_24913986
ES.25575.13	chr5	+	934	8	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	-4	-1162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	299.42121037844	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAATGCTTCTTTGCGT	NA	False	NA	21	True	TATAAA	-17	NA	24890980	24914212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902182_24902329_24902387_24913986
ES.25575.14	chr5	+	2977	14	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	188.184694621908	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24890980	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.15	chr5	+	6412	12	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-4	-1163	intron_retention	FALSE	canonical	3	384	junction_1	98.4572735288958	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAATGCTTCTTTGCG	NA	False	NA	20	True	TATAAA	-16	NA	24890980	24914211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24907483_24908416_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.16	chr5	+	4599	13	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-3	-507	intron_retention	FALSE	canonical	3	384	junction_1	99.0096445919397	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAGCAAGTTATTTTT	NA	False	NA	11	True	ATTAAA	-20	NA	24890981	24914867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.17	chr5	+	2008	16	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-3	-1157	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	238.834615023311	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTCTTTGCGTTCCTC	NA	False	NA	26	True	TATAAA	-22	NA	24890981	24914217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24892431_24892503_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.18	chr5	+	2524	14	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-3	-508	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	211.411318434303	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAAGTTATTTT	NA	False	NA	10	True	ATTAAA	-19	NA	24890981	24914866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894390_24894509_24897804_24897973_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.19	chr5	+	3107	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.751834250014	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTCTGGTCTGACGC	NA	False	NA	6	True	AATAAA	-15	NA	24890981	24915371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899694_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.2	chr5	+	1948	12	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	-45	-6078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	209.307990078601	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAGGTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24890776	24909296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24908851
ES.25575.20	chr5	+	538	4	NNC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-3	-17077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	294.555408860352	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAATAAAAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	24890981	24898297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24898097
ES.25575.21	chr5	+	1050	9	ISM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	160	8832	-3	-8830	5prime_fragment	FALSE	canonical	3	384	junction_1	107.507848550699	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTGTCTCAGCCTGCT	NA	False	NA	NA	False	CATAAA	-15	NA	24890981	24906544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347
ES.25575.22	chr5	+	3486	13	ISM	ENSMUSG00000028954.12	ENSMUST00000200337.2	3862	14	-3	507	-3	-507	intron_retention	FALSE	canonical	3	384	junction_1	96.0079206801883	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAGCAAGTTATTTTT	NA	False	NA	11	True	ATTAAA	-20	NA	24890981	24914867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680
ES.25575.23	chr5	+	2499	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	453	594	-2	-594	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAGGTTGCAAAATCA	NA	False	NA	3	True	AGTAAA	-12	NA	24890982	24914780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.24	chr5	+	7201	11	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-2	-501	intron_retention	FALSE	canonical	3	384	junction_1	106.026600435928	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTTATTTTTAATTAA	NA	False	NA	17	True	ATTAAA	-26	NA	24890982	24914873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24902186_24902329_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24912862_24913680_24913859_24913986
ES.25575.26	chr5	+	1645	12	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-1	-6155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	275.088896225286	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCAGCC	NA	False	NA	NA	False	NA	NA	NA	24890983	24909219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906526_24907374_24907483_24908416_24908570_24908851
ES.25575.27	chr5	+	3426	16	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	249.218904223219	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTCTGGTCTGACGC	NA	False	NA	6	True	AATAAA	-15	NA	24890983	24915371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24909807_24910145_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.28	chr5	+	3820	14	NNC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-1	-508	intron_retention	FALSE	canonical	0	0	junction_10	255.515513256618	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAAGTTATTTT	NA	False	NA	10	True	ATTAAA	-19	NA	24890983	24914866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24909807_24910145_24911435_24911583_24912765_24912862_24913680
ES.25575.29	chr5	+	3706	13	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-1	-1163	intron_retention	FALSE	canonical	3	299	junction_1	116.779945005791	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAATGCTTCTTTGCG	NA	False	NA	20	True	TATAAA	-16	NA	24890983	24914211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.3	chr5	+	2115	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	-5	1159	-5	-1157	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTCTTTGCGTTCCTC	NA	False	NA	26	True	TATAAA	-22	NA	24890816	24914217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.30	chr5	+	2665	16	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	0	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	239.168968630037	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAACCACAGCAAGTTATT	NA	False	NA	8	True	ATTAAA	-17	NA	24890984	24914864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24892431_24892503_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.31	chr5	+	1887	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	9	-1159	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_12	198.860388417685	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCTTCTTTGCGTTCC	NA	False	NA	24	True	TATAAA	-20	NA	24890993	24914215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912801_24912862_24913680_24913859_24913986
ES.25575.32	chr5	+	1833	8	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	13	-8830	intron_retention	FALSE	canonical	1	1	junction_4	263.307455888607	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTGTCTCAGCCTGCT	NA	False	NA	NA	False	CATAAA	-15	NA	24890997	24906544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24900589_24901948_24902186_24902329_24902422_24903662_24903770_24906347
ES.25575.33	chr5	+	3017	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	294.660726730847	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24890997	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907372_24907483_24908476_24908570_24911438_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.34	chr5	+	1865	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	13	-1166	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	194.584119577721	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTGAATGCTTCTTT	NA	False	NA	17	True	TATAAA	-13	NA	24890997	24914208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908476_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.35	chr5	+	2673	14	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	16	-1160	intron_retention	FALSE	canonical	3	299	junction_1	115.360612888096	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATGCTTCTTTGCGTTC	NA	False	NA	23	True	TATAAA	-19	NA	24891000	24914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.36	chr5	+	3897	13	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	18	-1202	intron_retention	FALSE	canonical	3	299	junction_1	115.163531071641	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTACGTTTCGGCTA	NA	False	NA	-19	True	NA	NA	NA	24891002	24914172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24907483_24908416_24908570_24911435_24912862_24913680_24913859_24913986
ES.25575.37	chr5	+	3200	14	ISM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	474	0	19	0	intron_retention	FALSE	canonical	3	299	junction_1	112.644699841434	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24891003	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680
ES.25575.38	chr5	+	5241	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	19	-508	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	203.359087250477	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAAGTTATTTT	NA	False	NA	10	True	ATTAAA	-19	NA	24891003	24914866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24911247_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.39	chr5	+	3133	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	174.893276495311	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTCTGGTCTGACGCA	NA	False	NA	7	True	AATAAA	-16	NA	24891012	24915372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891093_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.4	chr5	+	2074	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	315	1157	23	-1157	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTCTTTGCGTTCCTC	NA	False	NA	26	True	TATAAA	-22	NA	24890844	24914217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.40	chr5	+	1988	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	28	-1160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.10749965325	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATGCTTCTTTGCGTTC	NA	False	NA	23	True	TATAAA	-19	NA	24891012	24914214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891093_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.41	chr5	+	3147	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.10749965325	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24891013	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891093_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.43	chr5	+	2627	15	NNC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	41	-508	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.10749965325	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGCAAGTTATTTT	NA	False	NA	10	True	ATTAAA	-19	NA	24891025	24914866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24891093_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.44	chr5	+	3071	14	ISM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	3553	2	3390	0	3prime_fragment	FALSE	canonical	3	571	junction_8	47.4627228377344	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24894374	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.45	chr5	+	1909	14	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	3390	-1166	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	190.194979369895	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTGAATGCTTCTTT	NA	False	NA	17	True	TATAAA	-13	NA	24894374	24914208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903774_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.46	chr5	+	4672	12	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	3390	0	intron_retention	FALSE	canonical	3	651	junction_2	33.2274903611825	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24894374	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24894509_24897804_24897973_24899697_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.48	chr5	+	8055	6	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	11018	-4	intron_retention	FALSE	canonical	3	669	junction_2	38.6812616133445	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATGTCTGGTCTGACG	NA	False	NA	5	True	AATAAA	-14	NA	24902002	24915370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24902186_24902329_24902422_24903662_24907483_24908416_24908570_24911435_24913859_24913986
ES.25575.5	chr5	+	2693	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	73	503	73	-501	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTTATTTTTAATTAA	NA	False	NA	17	True	ATTAAA	-26	NA	24890894	24914873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.50	chr5	+	2015	3	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	17532	-1158	intron_retention	FALSE	canonical	3	695	junction_1	11	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTCTTTGCGTTCCT	NA	False	NA	25	True	TATAAA	-21	NA	24908516	24914216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24908570_24911435_24912862_24913680
ES.25575.51	chr5	+	3291	3	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	20152	0	intron_retention	FALSE	canonical	3	717	junction_1	17	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24911136	24915374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24912862_24913680_24913859_24913986
ES.25575.6	chr5	+	2669	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	396	481	-59	-481	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTAGACTGGAAGCTT	NA	False	NA	37	True	TTTAAA	-31	NA	24890925	24914893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.7	chr5	+	3147	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	401	-2	-54	0	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890930	24915376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.8	chr5	+	2488	14	NIC	ENSMUSG00000028954.12	novel	3546	15	NA	NA	-12	-507	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	210.787478154528	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAGCAAGTTATTTTT	NA	False	NA	11	True	ATTAAA	-20	NA	24890972	24914867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25575.9	chr5	+	4394	13	NIC	ENSMUSG00000028954.12	novel	3862	14	NA	NA	-12	-1205	intron_retention	FALSE	canonical	3	384	junction_1	98.8377950089045	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTGCTACGTTTCGG	NA	False	NA	-22	True	NA	NA	NA	24890972	24914169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_24891021_24894377_24894509_24897804_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ES.25576.1	chr5	-	1791	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	47	526	0	1	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTGGTTTTCTTTTG	NA	False	NA	0	True	AATACA	-19	NA	24935678	24917261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
ES.25576.2	chr5	-	2762	1	FSM	ENSMUSG00000055235.12	ENSMUST00000196443.2	1109	1	-1650	-3	554	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTTTGGTTTTCTTT	5388	False	NA	-2	True	AATACA	-17	NA	24920025	24917263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24917300_24920000
ES.25576.3	chr5	-	4374	5	FSM	ENSMUSG00000055235.12	ENSMUST00000142607.2	4362	5	-15	3	-15	1	multi-exon	FALSE	canonical	3	12	junction_2	3.16227766016838	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTCTTTGGTTTTCT	NA	False	NA	-4	True	AATACA	-15	NA	24935693	24917265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24917750_24917847_24920660_24922964_24923386_24927632_24927775_24935178
ES.25576.4	chr5	-	3211	2	NNC	ENSMUSG00000055235.12	novel	2364	6	NA	NA	32	-11254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCCAGGGGATCGCTA	NA	False	NA	NA	False	NA	NA	NA	24935646	24928889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24931633_24935178
ES.25577.1	chr5	-	609	4	FSM	ENSMUSG00000038135.5	ENSMUST00000047119.5	768	4	159	0	159	0	multi-exon	FALSE	canonical	2	2	junction_3	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGCGGGCCTCGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	24962847	24956000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24956188_24959131_24959278_24961034_24961284_24962820
ES.25577.2	chr5	-	674	3	NNC	ENSMUSG00000038135.5	novel	768	4	NA	NA	1615	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTGGCGGGCCTCGGA	NA	False	NA	NA	False	AATAAA	-14	NA	24961391	24956001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_24956188_24959146_24959278_24961034
ES.25577.3	chr5	-	193	1	NIC	ENSMUSG00000038135.5	novel	221	2	NA	NA	128	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTGGCGGGCCTCGGA	NA	False	NA	NA	False	AATAAA	-14	NA	24956194	24956001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_24956000_24956200
ES.25577.4	chr5	-	1022	2	FSM	ENSMUSG00000038135.5	ENSMUST00000123386.2	221	2	-803	2	-803	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCTGGCGGGCCTCGG	NA	False	NA	NA	False	AATAAA	-13	NA	24957125	24956002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_24956188_24956288
ES.25578.1	chr5	+	205	1	Intergenic	novelGene_21295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTCTCTCCGAGGCAGA	9752	False	NA	NA	False	NA	NA	NA	24995603	24995808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_24995600_24995800
ES.25579.1	chr5	-	190	1	Intergenic	novelGene_21296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTCTTTGATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	24997202	24997012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24997000_24997200
ES.25579.2	chr5	-	176	2	Intergenic	novelGene_21297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTAGCTTG	NA	False	NA	NA	False	NA	NA	NA	25007212	24997026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_24997165_25007174
ES.2558.1	chr10	-	220	1	Intergenic	novelGene_1941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTAGTATCAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	33236560	33236340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_33236300_33236600
ES.25580.1	chr5	+	174	1	Intergenic	novelGene_21298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	25038863	25039037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25038900_25039000
ES.25581.1	chr5	-	1675	7	NIC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	19	-418	intron_retention	FALSE	canonical	3	1533	junction_1	69.7376034384129	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACTTGGTGTGGTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	25047407	25008238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25008755_25011996_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ES.25581.12	chr5	-	1050	7	NIC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	38	416	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	607.351810915405	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTGAGCTACTTGG	NA	False	NA	-11	True	AATAAA	-15	NA	25047388	25008248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25047182
ES.25581.13	chr5	-	1316	9	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	53	416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	702.570892775242	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTGAGCTACTTGG	NA	False	NA	-11	True	AATAAA	-15	NA	25047554	25008248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25046580_25046609_25047182
ES.25581.14	chr5	-	973	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	9	414	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	560.802195110554	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCCTTTGAGCTACTT	NA	False	NA	-13	True	AATAAA	-13	NA	25047598	25008250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047539
ES.25581.15	chr5	-	983	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	219	582	23	262	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGCATTAATTTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	25047403	25008402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ES.25581.16	chr5	-	4997	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	8	225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	573.284770922295	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGTATTTCTTAATA	NA	False	NA	NA	False	TTTAAA	-19	NA	25047418	25008439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013934_25015259_25018864_25022757_25022830_25047182
ES.25581.17	chr5	-	910	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-186	224	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	565.331183412675	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTGTATTTCTTAAT	NA	False	NA	NA	False	TTTAAA	-18	NA	25047808	25008440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047622
ES.25581.18	chr5	-	3110	1	FSM	ENSMUSG00000028945.10	ENSMUST00000196039.2	2606	1	2488	-2992	2307	2992	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAAATGGGTGATTGGG	NA	False	NA	NA	False	NA	NA	NA	25045119	25042009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25042000_25045100
ES.25581.2	chr5	-	1388	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	-22	418	-22	-418	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACTTGGTGTGGTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	25047644	25008238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ES.25581.3	chr5	-	847	4	NNC	ENSMUSG00000028945.10	novel	4046	3	NA	NA	-19	-419	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	772.702184975988	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTACTTGGTGTGGTTTT	NA	False	NA	-2	True	AATAAA	-24	NA	25047445	25008239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008732_25018843_25018864_25022757_25022830_25047182
ES.25581.4	chr5	-	4568	7	NIC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	18	419	intron_retention	FALSE	canonical	3	1572	junction_1	59.8296191976293	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047589	25008245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ES.25581.5	chr5	-	5196	7	NIC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	42	419	intron_retention	FALSE	canonical	3	1533	junction_1	72.7476612835232	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047565	25008245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25022830_25047182
ES.25581.6	chr5	-	5537	4	NIC	ENSMUSG00000028945.10	novel	522	6	NA	NA	1290	419	intron_retention	FALSE	canonical	3	1533	junction_1	60.0351748745868	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	8261	False	NA	-8	True	AATAAA	-18	NA	25017667	25008245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25008755_25011996_25012651_25012745_25012803_25013350
ES.25581.7	chr5	-	936	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-19	417	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	565.331183412675	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTGAGCTACTTGGT	NA	False	NA	-10	True	AATAAA	-16	NA	25047641	25008247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047622
ES.25581.9	chr5	-	981	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-86	417	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_7	520.057061233453	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTGAGCTACTTGGT	NA	False	NA	-10	True	AATAAA	-16	NA	25047512	25008247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047448
ES.25582.1	chr5	+	197	1	Intergenic	novelGene_21299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGAGAATCATGAGTATA	NA	False	NA	NA	False	AAGAAA	-6	NA	25292683	25292880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25292700_25292900
ES.25583.1	chr5	+	5440	1	FSM	ENSMUSG00000043833.7	ENSMUST00000171190.2	2025	1	-138	-3277	-138	3277	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCATAACTGTTAGC	NA	False	NA	NA	False	NA	NA	NA	25305842	25311282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25305800_25311300
ES.25583.2	chr5	+	2088	1	FSM	ENSMUSG00000043833.7	ENSMUST00000171190.2	2025	1	-57	-6	-57	6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTGGAGTACAGACTT	NA	False	NA	NA	False	TTTAAA	-13	NA	25305923	25308011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25305900_25308000
ES.25583.3	chr5	+	3721	1	FSM	ENSMUSG00000043833.7	ENSMUST00000171190.2	2025	1	404	-2100	-71	2100	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTAGGCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	25306384	25310105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25306400_25310100
ES.25584.1	chr5	-	2374	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	15	-184	-2	180	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGACCCATCACGTG	NA	False	NA	NA	False	AATAAA	-9	NA	25113452	25067561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.10	chr5	-	1934	10	NIC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	63	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	52.9446484780958	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTAAAGTTTTTATG	NA	False	NA	-16	True	AATAAA	-12	NA	25113385	25067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.11	chr5	-	2237	12	NNC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.6030148494963	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTAAAGTTTTTATG	NA	False	NA	-16	True	AATAAA	-12	NA	25113458	25067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076491_25076658_25077325_25077412_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.13	chr5	-	5358	9	NIC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	30	-11	intron_retention	FALSE	canonical	3	116	junction_1	20.9448681065315	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTGCTAAAGTTTT	6938	False	NA	-20	True	AATAAA	-8	NA	25094120	25067756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079
ES.25584.14	chr5	-	2547	17	NNC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	26	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.7631344236401	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTACTACTTTTCATT	NA	False	NA	-7	True	ATTAAA	-16	NA	25305614	25068588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25077325_25077412_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ES.25584.18	chr5	-	1397	13	NNC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	71	183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.4782594816158	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGTACTACTTTTCA	NA	False	NA	-9	True	ATTAAA	-14	NA	25113377	25068590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25077284_25077412_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.19	chr5	-	2888	16	NNC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	-417	176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	68.4006497694933	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCCTGAAATAGTACTA	NA	False	NA	-16	True	ATTAAA	-7	NA	25306057	25068597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081990_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ES.25584.2	chr5	-	3554	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	-220	-3	-220	3	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATATGAGTACTGT	NA	False	NA	-2	True	AATAAA	-26	NA	25305860	25067738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ES.25584.20	chr5	-	1391	10	ISM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	-41	6004	-1	503	5prime_fragment	FALSE	canonical	3	123	junction_9	18.3726850393609	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTGTGTGATCTCAAA	NA	False	NA	NA	False	GATAAA	-16	NA	25113508	25073749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.21	chr5	-	4612	8	NIC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	89	499	intron_retention	FALSE	canonical	3	123	junction_7	18.7844920840874	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATGTGTGTGTGATCT	NA	False	NA	NA	False	GATAAA	-12	NA	25113359	25073753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25074276_25076052_25076091_25076491_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.22	chr5	-	3147	9	NIC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	11	494	intron_retention	FALSE	canonical	3	123	junction_8	19.3261480900877	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATATCATGTGTGTGT	NA	False	NA	NA	False	GATAAA	-7	NA	25113496	25073758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ES.25584.23	chr5	-	4947	2	NNC	ENSMUSG00000028944.15	novel	458	2	NA	NA	49	2894	intron_retention	TRUE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGGGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	25113399	25108334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25110803_25110920
ES.25584.24	chr5	-	5049	1	NIC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	64	2893	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGGGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25113384	25108335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25108300_25113400
ES.25584.25	chr5	-	4962	2	NNC	ENSMUSG00000028944.15	novel	458	2	NA	NA	0	2861	intron_retention	TRUE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25113448	25108367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25110824_25110942
ES.25584.26	chr5	-	2290	2	Antisense	novelGene_ENSMUSG00000086446.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25110775	25108367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_25110567_25110684
ES.25584.5	chr5	-	2311	13	NNC	ENSMUSG00000028944.15	novel	2838	14	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.4661045613142	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTATGTATATGAG	NA	False	NA	-8	True	AATAAA	-20	NA	25113442	25067744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25077284_25077412_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
ES.25584.7	chr5	-	2344	13	NNC	ENSMUSG00000028944.15	novel	2205	12	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	60.9498883418903	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	-9	True	AATAAA	-19	NA	25113378	25067745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25111330_25111559_25113320
ES.25584.9	chr5	-	3541	15	NIC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	-345	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	72.3717726008404	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTAAAGTTTTTATG	NA	False	NA	-16	True	AATAAA	-12	NA	25305985	25067752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ES.25585.1	chr5	-	6054	1	Intergenic	novelGene_21300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGTTCCTGGAGATACC	NA	False	NA	NA	False	NA	NA	NA	25362398	25356344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_25356300_25362400
ES.25586.1	chr5	+	2595	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	-44	1	-44	0	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGACTCTTCTATCTC	NA	False	NA	12	True	AATAAA	-26	NA	25427835	25470915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.10	chr5	+	4734	11	FSM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	-2249	8	-1259	-7	multi-exon	FALSE	canonical	3	184	junction_7	27.2288449993752	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	False	NA	5	True	AATAAA	-19	NA	25450111	25470908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.11	chr5	+	6473	5	NIC	ENSMUSG00000038072.15	novel	2493	11	NA	NA	7921	-7	intron_retention	FALSE	canonical	3	244	junction_1	15.8015030930605	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	False	NA	5	True	AATAAA	-19	NA	25460281	25470908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_25462509_25463809_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.2	chr5	+	3058	1	FSM	ENSMUSG00000038072.15	ENSMUST00000196213.2	4010	1	934	18	-44	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGTAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	25427835	25430893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25427800_25430900
ES.25586.3	chr5	+	2348	12	NNC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	-32	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.226066559547	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	False	NA	5	True	AATAAA	-19	NA	25427847	25470908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25428030_25452679_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.4	chr5	+	2450	11	NIC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	-32	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	77.503290252737	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	False	NA	5	True	AATAAA	-19	NA	25427847	25470908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.6	chr5	+	3793	11	NIC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	-24	-8	intron_retention	FALSE	canonical	3	184	junction_8	27.029798371427	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGGATGTTTGACTCT	NA	False	NA	4	True	AATAAA	-18	NA	25427855	25470907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25468483_25469959_25470098_25470247
ES.25586.7	chr5	+	2968	12	NNC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	74.2711138135644	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	False	NA	5	True	AATAAA	-19	NA	25427870	25470908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467567_25468377_25468483_25469959_25470098_25470247
ES.25586.8	chr5	+	2562	12	NNC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	75.2430771643281	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGTTTGACTCTTCTA	NA	False	NA	8	True	AATAAA	-22	NA	25427882	25470911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462372_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ES.25586.9	chr5	+	2439	12	NNC	ENSMUSG00000038072.15	novel	2552	12	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	76.4665972557153	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGGATGTTTGACTCT	NA	False	NA	4	True	AATAAA	-18	NA	25427919	25470907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25470023_25470098_25470247
ES.25587.1	chr5	+	8553	6	Antisense	novelGene_ENSMUSG00000038056.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAGGA	2976	False	NA	NA	False	AATGAA	-28	NA	25519057	25535632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_25520876_25523991_25524173_25525304_25525379_25528649_25528863_25529085_25534145_25534424
ES.25587.2	chr5	+	3235	7	Antisense	novelGene_ENSMUSG00000038056.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAACCCACTAGTGTTA	3553	False	NA	NA	False	NA	NA	NA	25519634	25535691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_25520876_25523991_25524173_25525304_25525379_25528649_25528864_25529085_25529220_25534020_25534145_25534424
ES.25588.1	chr5	+	4685	5	Genic_Genomic	ENSMUSG00000106457.2	novel	4020	1	NA	NA	-4355	5091	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTACCCCTCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	25569662	25583128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_25571200_25577766_25578468_25579487_25579566_25580339_25580454_25580873
ES.25589.1	chr5	+	176	1	Intergenic	novelGene_21301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAGGGAGCATGA	NA	False	NA	NA	False	NA	NA	NA	25689008	25689184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25689000_25689200
ES.2559.1	chr10	+	294	1	Intergenic	novelGene_1942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGGAAGAAAACACA	NA	False	NA	NA	False	NA	NA	NA	33254320	33254614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_33254300_33254600
ES.2559.2	chr10	+	177	1	Intergenic	novelGene_1943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33254322	33254499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_33254300_33254500
ES.2559.3	chr10	+	176	2	Antisense	novelGene_ENSMUSG00000111958.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTAACTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	33254322	33317276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_33254481_33317258
ES.25590.1	chr5	-	5311	3	NIC	ENSMUSG00000038056.16	novel	6443	18	NA	NA	4766	803	intron_retention	FALSE	canonical	3	56	junction_1	1	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGAAGCCCCTTCTTT	4098	False	NA	NA	False	AAAAAG	-26	NA	25481632	25475992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25480735_25480897_25480972_25481137
ES.25590.10	chr5	-	5226	17	NIC	ENSMUSG00000038056.16	novel	6443	18	NA	NA	-2232	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_15	15.7380907355371	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGTGCACTGTGTTC	NA	False	NA	-4	True	AATAAA	-14	NA	25500609	25476795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498175_25499554_25499720_25500395
ES.25590.11	chr5	-	6965	19	NNC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-2650	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.2312700247738	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGTGCACTGTGTTC	NA	False	NA	-4	True	AATAAA	-14	NA	25507723	25476795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486658_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499649_25500395_25500609_25503867_25505575_25507703
ES.25590.13	chr5	-	3266	4	ISM	ENSMUSG00000038056.16	ENSMUST00000174734.8	6443	18	22813	1	4138	-1	3prime_fragment	FALSE	canonical	3	56	junction_2	3.39934634239519	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAATGTGCACTGTGTT	3470	False	NA	-5	True	AATAAA	-13	NA	25482260	25476796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137
ES.25590.14	chr5	-	5983	17	NIC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	354	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_15	15.0425178660356	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGAATGTGCACTGTGTT	NA	False	NA	-5	True	AATAAA	-13	NA	25504719	25476796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25500395_25500609_25503867
ES.25590.16	chr5	-	5235	18	NNC	ENSMUSG00000038056.16	novel	6443	18	NA	NA	1036	-241	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	16.9436272737071	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCTCTTGATAAATAG	NA	False	NA	NA	False	AATAAA	-13	NA	25504037	25477036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486658_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499717_25500395_25500609_25503867
ES.25590.17	chr5	-	3430	9	ISM	ENSMUSG00000038056.16	ENSMUST00000174734.8	6443	18	12950	472	-5725	156	3prime_fragment	FALSE	canonical	2	6	junction_5	16.985287751463	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTGCTTGTAG	6670	False	NA	NA	False	AATAAA	-13	NA	25492123	25477267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486658_25486802_25488101_25488239_25489064_25490182_25492048
ES.25590.18	chr5	-	4159	8	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	184300	25876	-5895	-10365	internal_fragment	FALSE	canonical	3	11	junction_7	3.68117106477861	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGATGCAGAATCCGG	NA	False	NA	NA	False	NA	NA	NA	25519443	25504482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977
ES.25590.19	chr5	-	9570	36	NNC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	1	6453	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	4.45604382054444	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTGTTTGGTAAAGGT	9417	False	NA	NA	False	AATAAA	-45	NA	25703780	25514281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25516418_25518253_25518547_25518977_25520874_25523989_25524173_25525304_25525379_25528649_25528865_25529086_25529220_25534238_25534272_25534444_25534574_25543410_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387
ES.25590.2	chr5	-	2953	4	ISM	ENSMUSG00000038056.16	ENSMUST00000174734.8	6443	18	23331	-204	4656	204	3prime_fragment	FALSE	canonical	3	56	junction_2	3.39934634239519	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTGTTTAAACTCTG	3988	False	NA	NA	False	ATTAAA	-18	NA	25481742	25476591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137
ES.25590.21	chr5	-	9965	27	NNC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-3	-17165	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_25	3.41593897094993	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTGATCAAACAACT	9441	False	NA	NA	False	NA	NA	NA	25703756	25537899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387
ES.25590.22	chr5	-	4751	27	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	-58	64549	-20	-22421	5prime_fragment	FALSE	canonical	2	10	junction_15	3.10372938489723	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAGCCTTTTTTAATG	9396	False	NA	NA	False	NA	NA	NA	25703801	25543155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ES.25590.23	chr5	-	6486	14	ISM	ENSMUSG00000038056.16	ENSMUST00000173073.8	5301	34	-74	53283	7	3816	5prime_fragment	FALSE	canonical	3	10	junction_2	3.87069096166435	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTCTTATTTATGAA	9423	False	NA	NA	False	AATAAA	-12	NA	25703774	25574017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ES.25590.3	chr5	-	11086	23	NIC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-7284	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	16.92038967568	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCACTGTGTTCTCTG	8798	False	NA	0	True	AATAAA	-18	NA	25520832	25476791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977
ES.25590.4	chr5	-	16980	60	NNC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	13.5209414432653	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGCACTGTGTTCTCT	9417	False	NA	-1	True	AATAAA	-17	NA	25703780	25476792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486658_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499717_25500395_25500609_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977_25520874_25523989_25524173_25525304_25525379_25528649_25528865_25529086_25529220_25534020_25534141_25534238_25534272_25534444_25534574_25535793_25535899_25543410_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ES.25590.5	chr5	-	13436	40	NIC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-45891	3	combination_of_known_splicesites	FALSE	canonical	3	8	junction_32	15.1690452650712	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGCACTGTGTTCTCT	NA	False	NA	-1	True	AATAAA	-17	NA	25559439	25476792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499720_25500395_25500609_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977_25520874_25523989_25524173_25525304_25525379_25528649_25528865_25529086_25529220_25534020_25534141_25534238_25534272_25534444_25534574_25543410_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332
ES.25590.6	chr5	-	8122	20	NIC	ENSMUSG00000038056.16	novel	6486	20	NA	NA	-2198	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	17.4352780209433	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGCACTGTGTTCT	NA	False	NA	-3	True	AATAAA	-15	NA	25515746	25476794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597
ES.25590.8	chr5	-	12104	24	NNC	ENSMUSG00000038056.16	novel	14967	59	NA	NA	-6865	1	intron_retention	FALSE	canonical	0	0	junction_9	18.3531828158142	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGCACTGTGTTCT	9217	False	NA	-3	True	AATAAA	-15	NA	25520413	25476794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492078_25492703_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499717_25500395_25500609_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977
ES.25590.9	chr5	-	3729	1	NIC	ENSMUSG00000038056.16	novel	6443	18	NA	NA	5874	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATGTGCACTGTGTTC	5206	False	NA	-4	True	AATAAA	-14	NA	25480524	25476795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_25476800_25480500
ES.25591.1	chr5	+	5099	1	Intergenic	novelGene_21302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGTTTTAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	25704374	25709473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25704400_25709500
ES.25591.2	chr5	+	4586	2	Intergenic	novelGene_21303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGTTTTAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	25704800	25709473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25705488_25705574
ES.25592.1	chr5	+	168	1	Intergenic	novelGene_21304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	25719520	25719688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25719500_25719700
ES.25593.1	chr5	+	173	1	Intergenic	novelGene_21305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAGTTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	25728924	25729097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25728900_25729100
ES.25594.1	chr5	+	932	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-178	700	-178	-700	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCTGTATAGCCTT	NA	False	NA	NA	False	TATAAA	-13	NA	25734832	25735764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25734800_25735800
ES.25594.2	chr5	+	1600	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-162	16	-162	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTCTTTATACGTC	NA	False	NA	NA	False	NA	NA	NA	25734848	25736448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25734800_25736400
ES.25594.3	chr5	+	922	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	1	531	1	-531	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	25735011	25735933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25735000_25735900
ES.25595.1	chr5	-	132	1	Antisense	novelGene_ENSMUSG00000101856.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTCATTTGGTAATGT	4728	False	NA	NA	False	AAAAAG	-39	NA	25735804	25735672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_25735700_25735800
ES.25596.1	chr5	+	209	1	Intergenic	novelGene_21306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCTCAAATACGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	25738656	25738865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25738700_25738900
ES.25597.1	chr5	+	192	1	Intergenic	novelGene_21307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTAAAAAAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	25747665	25747857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25747700_25747900
ES.25598.1	chr5	-	1766	2	Intergenic	novelGene_21308	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAACAATGATAATTTT	NA	False	NA	NA	False	AATAAA	-2	NA	25757382	25755560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_25756478_25756533
ES.25599.1	chr5	+	177	1	Intergenic	novelGene_21309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	25800709	25800886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25800700_25800900
ES.256.1	chr1	+	772	3	NNC	ENSMUSG00000102531.2	novel	566	2	NA	NA	-4558	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCCTTTGTCAGCATA	NA	False	NA	NA	False	NA	NA	NA	35914367	35920201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_35914437_35918789_35919054_35919762
ES.2560.1	chr10	+	178	1	Intergenic	novelGene_1944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAATAACTTTTT	9897	False	NA	NA	False	NA	NA	NA	33374345	33374523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_33374300_33374500
ES.25600.1	chr5	+	1368	5	Intergenic	novelGene_21310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTCACCTCTGTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	25837732	25852830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25837852_25844599_25844776_25846327_25846628_25851682_25851954_25852328
ES.25601.1	chr5	+	2763	1	Intergenic	novelGene_21312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAAGAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	25868017	25870780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25868000_25870800
ES.25602.1	chr5	-	3513	1	Intergenic	novelGene_21311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25869793	25866280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_25866300_25869800
ES.25603.1	chr5	-	4778	1	Intergenic	novelGene_21313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAAGCGTCAAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	25889566	25884788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_25884800_25889600
ES.25604.1	chr5	+	6650	1	Antisense	novelGene_ENSMUSG00000028933.12_AS_novelGene_ENSMUSG00000106241.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25892580	25899230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_25892600_25899200
ES.25605.1	chr5	-	3172	1	FSM	ENSMUSG00000106241.2	ENSMUST00000196083.2	2023	1	-1794	645	-1794	-645	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGACTACATAGTTTT	NA	False	NA	NA	False	NA	NA	NA	25896187	25893015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25893000_25896200
ES.25605.10	chr5	-	3059	3	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	37.5	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	-18	True	AATACA	-5	NA	25910770	25894815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897698_25903248_25903331_25910675
ES.25605.11	chr5	-	3705	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.4216374224502	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	-18	True	AATACA	-5	NA	25910809	25894815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25900756_25901206_25903219_25903331_25910675
ES.25605.13	chr5	-	3181	3	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	-9921	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.5	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAACATTTCTATAT	NA	False	NA	-23	True	NA	NA	NA	25920744	25894820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25903248_25903331_25920651
ES.25605.14	chr5	-	3669	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	14	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.4216374224502	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTTAAAACATTTCTAT	NA	False	NA	-25	True	NA	NA	NA	25910809	25894822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25900756_25901206_25903248_25903331_25910675
ES.25605.15	chr5	-	1040	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	28	2179	-24	60	multi-exon	FALSE	canonical	3	77	junction_1	2.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTGTTCTGTCCCCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	25910795	25896988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25897827_25903248_25903331_25910675
ES.25605.16	chr5	-	3046	1	Antisense	novelGene_ENSMUSG00000104549.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATTATGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	25916254	25913208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_25913200_25916300
ES.25605.2	chr5	-	4795	3	Fusion	ENSMUSG00000106241.2_ENSMUSG00000028933.12	novel	3247	3	NA	NA	12	-810	multi-exon	FALSE	canonical	0	0	junction_2	38.5	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCAGAGAGTATGTAGT	NA	False	NA	NA	False	NA	NA	NA	25910811	25893180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_25897827_25903248_25903331_25910744
ES.25605.3	chr5	-	4857	3	FSM	ENSMUSG00000106241.2_ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	19	-1629	19	-810	multi-exon	FALSE	canonical	3	77	junction_1	2.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCAGAGAGTATGTAGT	NA	False	NA	NA	False	NA	NA	NA	25910804	25893180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25897827_25903248_25903331_25910675
ES.25605.4	chr5	-	3521	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	-8	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.9678226338508	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGGGTGTGGAGTTCAG	NA	False	NA	42	True	TTTAAA	-19	NA	25910831	25894755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25901377_25901590_25903248_25903331_25910675
ES.25605.5	chr5	-	8612	3	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	14	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	41	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTATATTTCATATTT	NA	False	NA	-14	True	AATACA	-9	NA	25910809	25894811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25899262_25899302_25903331_25910675
ES.25605.6	chr5	-	3241	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	4	2	4	-2	multi-exon	FALSE	canonical	3	77	junction_1	2.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTATATTTCATATTT	NA	False	NA	-14	True	AATACA	-9	NA	25910819	25894811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_25897827_25903248_25903331_25910675
ES.25605.7	chr5	-	3342	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	32.9679979508749	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTATATTTCATATTT	NA	False	NA	-14	True	AATACA	-9	NA	25910808	25894811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25903248_25903331_25908295_25908408_25910675
ES.25605.8	chr5	-	3280	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.6551707048646	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	-18	True	AATACA	-5	NA	25910766	25894815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25901859_25901956_25903248_25903331_25910675
ES.25605.9	chr5	-	3394	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.2981481009094	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCTATATTTCAT	NA	False	NA	-18	True	AATACA	-5	NA	25910809	25894815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_25897827_25903248_25903331_25909573_25909741_25910675
ES.25606.1	chr5	+	5196	1	Intergenic	novelGene_21314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25928212	25933408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_25928200_25933400
ES.25607.1	chr5	+	644	2	NNC	ENSMUSG00000056367.15	novel	428	2	NA	NA	-44	-9367	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTGTGAATTATTATTC	NA	False	NA	NA	False	NA	NA	NA	25964950	25972971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25965127_25972503
ES.25607.10	chr5	+	2016	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	13	2	13	-2	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACTGTTCCTTGTGGTC	NA	False	NA	8	True	AATAAA	-16	NA	25965007	26055684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.11	chr5	+	2307	13	NNC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	48.6040550434495	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTCCTTGTGGTCTCT	NA	False	NA	11	True	AATAAA	-19	NA	25965008	26055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25965127_25972503_25972737_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.12	chr5	+	1852	13	NNC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	71	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	48.6040550434495	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAATTGATGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	25965107	26055331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25965127_25972503_25972737_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.2	chr5	+	1764	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-55	3	-26	-3	multi-exon	TRUE	canonical	3	90	junction_4	20.0016528242663	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATGTTTATATTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	25964968	26055337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.3	chr5	+	2111	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	-52	-347	-23	1	multi-exon	FALSE	canonical	3	90	junction_4	20.0016528242663	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTCCTTGTGGTCTCT	NA	False	NA	11	True	AATAAA	-19	NA	25964971	26055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.5	chr5	+	1631	11	NIC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	-17	17	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	37.7095478625772	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTTGTATTTTATGG	NA	False	NA	NA	False	AATAAA	-41	NA	25964977	26055357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.6	chr5	+	1476	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	-16	571	-16	-225	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGACTGTTCGTGGTCCT	NA	False	NA	NA	False	AGTAAA	-13	NA	25964978	26055115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.7	chr5	+	451	2	FSM	ENSMUSG00000056367.15	ENSMUST00000198693.2	428	2	-58	35	-16	-35	multi-exon	FALSE	canonical	2	10	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAATTAATAATCCCTT	NA	False	NA	NA	False	NA	NA	NA	25964978	25982303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_25965127_25982000
ES.25607.8	chr5	+	2269	12	NNC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.0227627049887	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAACTGTTCCTTGTGGTC	NA	False	NA	8	True	AATAAA	-16	NA	25964987	26055684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_25965127_25972503_25972737_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25607.9	chr5	+	1940	11	NIC	ENSMUSG00000056367.15	novel	1712	12	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	37.7095478625772	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGTTCCTTGTGGTCT	NA	False	NA	9	True	AATAAA	-17	NA	25964996	26055685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ES.25608.1	chr5	-	2850	4	Antisense	novelGene_ENSMUSG00000056367.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25971137	25968114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_25970637_25970684_25970784_25970858_25971008_25971057
ES.25608.2	chr5	-	3261	2	Antisense	novelGene_ENSMUSG00000056367.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25971499	25968114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_25970696_25970819
ES.25609.1	chr5	+	174	1	Intergenic	novelGene_21315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATCCATGGAAG	NA	False	NA	NA	False	NA	NA	NA	26116957	26117131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_26117000_26117100
ES.2561.1	chr10	-	2278	6	FSM	ENSMUSG00000019785.15	ENSMUST00000019920.13	2717	6	439	0	-134	0	multi-exon	FALSE	canonical	0	0	junction_4	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGATGTCATGGAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	33500326	33388281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33389343_33404318_33404540_33419377_33419489_33471739_33471915_33498539_33499055_33500131
ES.25610.1	chr5	+	177	1	Intergenic	novelGene_21316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATCTATCTTTGT	NA	False	NA	NA	False	NA	NA	NA	26273974	26274151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_26274000_26274200
ES.25611.1	chr5	+	157	1	Intergenic	novelGene_21317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATGAATAAATC	NA	False	NA	NA	False	NA	NA	NA	26403787	26403944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_26403800_26403900
ES.25612.1	chr5	+	161	1	Intergenic	novelGene_21318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	26997006	26997167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_26997000_26997200
ES.25613.1	chr5	-	2579	2	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTAATTGTCTTCCT	NA	False	NA	NA	False	AATACA	-15	NA	27109920	27106674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27109180_27109846
ES.25614.1	chr5	+	5439	1	Intergenic	novelGene_21319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTAGGAAAGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	27141787	27147226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27141800_27147200
ES.25615.1	chr5	+	1711	1	Intergenic	novelGene_21320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCAGCAAGACCGTTT	NA	False	NA	NA	False	NA	NA	NA	27224696	27226407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27224700_27226400
ES.25616.1	chr5	+	3551	26	FSM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-77	1017	-77	23	multi-exon	TRUE	canonical	2	5	junction_22	2.910395162173	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTGTCTCTGTTAAA	NA	False	NA	NA	False	GATAAA	-15	NA	27466895	27931481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926155_27927670_27927730_27928369_27928443_27928538_27928613_27930602
ES.25616.10	chr5	+	190	1	Intergenic	novelGene_21323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCAAACTAACATGTAT	NA	False	NA	NA	False	NA	NA	NA	27829938	27830128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27829900_27830100
ES.25616.2	chr5	+	2044	17	ISM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	-41	30458	-41	17	5prime_fragment	FALSE	canonical	2	6	junction_2	2.78107443266087	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCTGGCTCCCTAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	27466931	27902040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847
ES.25616.3	chr5	+	4012	6	NNC	ENSMUSG00000061576.16	novel	4491	26	NA	NA	-41	51477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.98665181883831	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTCAGTGTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	27466931	27709269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27706069
ES.25616.4	chr5	+	1047	8	NNC	ENSMUSG00000061576.16	novel	4491	26	NA	NA	-38	-110736	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.31459292506808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATAGTTATGTAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	27466934	27791287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27791184
ES.25616.5	chr5	+	3451	26	NNC	ENSMUSG00000061576.16	novel	4491	26	NA	NA	-35	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	3.41853769907544	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCTGTCTCTGTTAA	NA	False	NA	NA	False	GATAAA	-14	NA	27466937	27931480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926098_27927670_27927730_27928369_27928443_27928538_27928613_27930602
ES.25616.6	chr5	+	4900	25	NIC	ENSMUSG00000061576.16	novel	4491	26	NA	NA	87	20	intron_retention	FALSE	canonical	2	6	junction_2	2.72813275581181	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACCTGCTGTCTCTGTT	NA	False	NA	NA	False	GATAAA	-12	NA	27467059	27931478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27927730_27928369_27928443_27928538_27928613_27930602
ES.25616.7	chr5	+	4192	25	NNC	ENSMUSG00000061576.16	novel	3826	26	NA	NA	62006	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.06693134384582	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTTTTTTTTTTTTT	NA	False	NA	5	True	AATAAA	-15	NA	27528978	27932499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_27529125_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926155_27928369_27928443_27928538_27928613_27930602
ES.25616.8	chr5	+	194	1	Intergenic	novelGene_21321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGAATTTTATCTGCTT	NA	False	NA	NA	False	AATAAA	-10	NA	27621488	27621682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27621500_27621700
ES.25616.9	chr5	+	5051	1	Intergenic	novelGene_21322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27783978	27789029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27784000_27789000
ES.25617.1	chr5	-	1143	3	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	27626118	27615158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27615883_27616487_27616626_27625837
ES.25617.2	chr5	-	3811	2	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACAAGTGTGATTTTT	NA	False	NA	NA	False	GGGGCT	-39	NA	27626118	27622208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27623022_27623120
ES.25617.3	chr5	-	3830	2	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACAAGTGTGATTTTT	NA	False	NA	NA	False	GGGGCT	-39	NA	27626118	27622208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27623011_27623090
ES.25617.4	chr5	-	3626	2	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-16	NA	27626118	27622231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27622980_27623240
ES.25617.5	chr5	-	3621	2	Antisense	novelGene_ENSMUSG00000061576.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GGGGCT	-16	NA	27626118	27622231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_27622989_27623254
ES.25618.1	chr5	+	2858	1	Intergenic	novelGene_21325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTCCAGAGCAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	27973210	27976068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27973200_27976100
ES.25618.2	chr5	+	2665	1	Intergenic	novelGene_21324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGGACTGGAGAGATGG	NA	False	NA	NA	False	ATTAAA	-18	NA	27973210	27975875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27973200_27975900
ES.25619.1	chr5	-	5920	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	20	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.455755979586	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAAATCAGTA	NA	False	NA	NA	False	NA	NA	NA	27996669	27945124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947503_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988732_27988772_27993640_27993776_27996196
ES.25619.10	chr5	-	5331	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1969	intron_retention	FALSE	non_canonical	0	0	junction_17	236.860443734479	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996409	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985306_27988727_27988772_27993640_27993776_27996196
ES.25619.102	chr5	-	3702	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.416880280754	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996404	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27965009_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.103	chr5	-	5240	18	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-14	-1972	intron_retention	FALSE	canonical	2	16	junction_16	187.357752269929	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996407	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27993640_27993776_27996196
ES.25619.107	chr5	-	3728	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-18	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.713157524347	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996411	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986464_27988727_27988772_27993640_27993776_27996196
ES.25619.108	chr5	-	3767	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_18	230.593121102951	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996409	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961971_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988678_27988772_27993640_27993776_27996196
ES.25619.112	chr5	-	5839	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1972	intron_retention	FALSE	non_canonical	0	0	junction_16	186.073462195267	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996409	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986492_27988727_27988772_27993640_27993776_27996196
ES.25619.113	chr5	-	3661	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	31	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.816288919852	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996658	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947494_27949110_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996524
ES.25619.114	chr5	-	3651	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	293	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	269.329166634436	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996088	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27995942
ES.25619.118	chr5	-	3930	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	3	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.713157524347	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996390	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986406_27986632_27988678_27988772_27993640_27993776_27996196
ES.25619.12	chr5	-	3746	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	30	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.569962752063	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996351	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986406_27986484_27988678_27988772_27993640_27993776_27996196
ES.25619.120	chr5	-	3718	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	-1972	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	176.58609090186	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996408	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986464_27988727_27988772_27993640_27993776_27996196
ES.25619.121	chr5	-	3591	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-18	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_15	176.400814907415	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996411	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971139_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.124	chr5	-	6958	19	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1972	intron_retention	FALSE	canonical	3	600	junction_12	76.0245249578169	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAATTGGGTGATTATTT	NA	False	NA	-6	True	AATAAA	-14	NA	27996405	27947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.127	chr5	-	3641	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	3	-1975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	180.711244853829	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAGAATTGGGTGATTA	NA	False	NA	-9	True	AATAAA	-11	NA	27996378	27947052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27988727_27988772_27993640_27993776_27996196
ES.25619.128	chr5	-	3882	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	228.130566903157	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAGAATTGGGTGATTA	NA	False	NA	-9	True	AATAAA	-11	NA	27996404	27947052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27983312_27983464_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.129	chr5	-	3879	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	31	1924	at_least_one_novel_splicesite	FALSE	non_canonical	3	600	junction_14	73.16930708979	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTGTTAAAGATATG	NA	False	NA	-41	True	AATAAA	-31	NA	27996658	27947158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.130	chr5	-	3686	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-4	1921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	298.120126756521	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGGCTGTTAAAGAT	NA	False	NA	-44	True	AATAAA	-28	NA	27996397	27947161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27979024_27979117_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.131	chr5	-	3474	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	1910	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_17	180.095588654002	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTCTAAATTATGG	NA	False	NA	-55	True	AATAAA	-17	NA	27996412	27947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980597_27988727_27988772_27993640_27993776_27996196
ES.25619.132	chr5	-	3632	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	1910	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	176.157770194789	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTCTAAATTATGG	NA	False	NA	-55	True	AATAAA	-17	NA	27996412	27947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986406_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.133	chr5	-	5231	20	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	1910	intron_retention	FALSE	canonical	3	600	junction_13	74.9808470465806	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTCTAAATTATGG	NA	False	NA	-55	True	AATAAA	-17	NA	27996413	27947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.134	chr5	-	3590	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	1910	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	231.153520414464	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTCTAAATTATGG	NA	False	NA	-55	True	AATAAA	-17	NA	27996404	27947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.136	chr5	-	3518	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-26	1910	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_17	182.126295889202	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTGTCTAAATTATGG	NA	False	NA	-55	True	AATAAA	-17	NA	27996419	27947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27993640_27993776_27996196
ES.25619.139	chr5	-	6208	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	21	1909	at_least_one_novel_splicesite	FALSE	non_canonical	1	11	junction_20	173.678582444699	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996668	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27993862
ES.25619.14	chr5	-	3610	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	172.204960661574	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996412	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.141	chr5	-	3462	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	1909	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	234.688194156533	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996405	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947466_27949080_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980597_27988727_27988772_27993640_27993776_27996196
ES.25619.142	chr5	-	3556	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	1909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305.136899604096	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996413	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947500_27949113_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27965009_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.143	chr5	-	3624	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-18	1909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	176.157770194789	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996411	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.145	chr5	-	3479	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	6	1909	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_16	179.206515141755	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996387	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.146	chr5	-	3614	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	1909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.542771021642	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCTGTCTAAATTATG	NA	False	NA	-56	True	AATAAA	-16	NA	27996409	27947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947503_27949114_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.148	chr5	-	3577	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-18	1908	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_11	176.193778266998	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCTGTCTAAATTAT	NA	False	NA	-57	True	AATAAA	-15	NA	27996411	27947174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27965009_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.151	chr5	-	3546	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-10	1906	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	172.343405539947	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTGCTGTCTAAATT	NA	False	NA	-59	True	AATAAA	-13	NA	27996403	27947176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971064_27971123_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.154	chr5	-	5722	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	1902	intron_retention	FALSE	non_canonical	0	0	junction_1	244.924074907176	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996405	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947494_27949110_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27959554_27961950_27961995_27963428_27963614_27964367_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986414_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.158	chr5	-	5245	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	1902	intron_retention	FALSE	non_canonical	3	600	junction_13	74.8115268052744	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996408	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.160	chr5	-	3866	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	1902	at_least_one_novel_splicesite	FALSE	non_canonical	2	22	junction_20	171.504365833643	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996413	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
ES.25619.161	chr5	-	5109	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	307	1902	intron_retention	FALSE	canonical	0	0	junction_5	240.266345264306	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996074	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956204_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
ES.25619.162	chr5	-	2265	16	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	1902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.944438663429	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996409	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947494_27949110_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971117_27996383
ES.25619.165	chr5	-	3710	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	28	1902	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_15	176.400814907415	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996661	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971139_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.166	chr5	-	4620	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	192	1902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	240.008693258195	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27995179	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957847_27963407_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27993862
ES.25619.167	chr5	-	5234	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-24	1902	intron_retention	FALSE	non_canonical	0	0	junction_16	180.690795102858	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996417	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.168	chr5	-	3613	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	1902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.4796083173	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTTGCTGTCTA	NA	False	NA	-63	True	AATAAA	-9	NA	27996404	27947180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947503_27949110_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.17	chr5	-	3920	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	268.78161312775	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996413	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27974618_27974786_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.170	chr5	-	2788	11	ISM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	135	18848	-20	804	5prime_fragment	FALSE	canonical	3	600	junction_4	48.4730853154614	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTTGCCTCTATTT	NA	False	NA	NA	False	NA	NA	NA	27996413	27963925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.171	chr5	-	3275	10	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-27	803	intron_retention	FALSE	canonical	3	600	junction_3	51.0881590977792	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGCTTTGCCTCTATT	NA	False	NA	NA	False	NA	NA	NA	27996420	27963926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.172	chr5	-	2764	11	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	281.377344503782	1013	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGGCTTTGCCTCTAT	NA	False	NA	NA	False	NA	NA	NA	27996412	27963927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.173	chr5	-	2717	11	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	66	802	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	276.714672541952	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGGCTTTGCCTCTAT	NA	False	NA	NA	False	NA	NA	NA	27996623	27963927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988678_27988772_27993640_27993776_27996524
ES.25619.174	chr5	-	3153	8	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	801	intron_retention	FALSE	canonical	2	16	junction_6	244.63308635337	1013	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTGGCTTTGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	27996408	27963928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27993640_27993776_27996196
ES.25619.175	chr5	-	2747	10	ISM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	-141	19646	0	6	5prime_fragment	FALSE	canonical	3	600	junction_3	51.0881590977792	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTGACCTGAAATCA	NA	False	NA	NA	False	AATAAA	-23	NA	27996689	27964723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.176	chr5	-	4683	9	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-2	4	intron_retention	FALSE	canonical	3	600	junction_3	54.1589097009901	1010	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACATAGTGACCTGAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	27996383	27964725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27988772_27993640_27993776_27996196
ES.25619.18	chr5	-	3926	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	20	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	168.19007187408	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996669	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.19	chr5	-	3753	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	176.157770194789	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996413	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.2	chr5	-	5139	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	-587	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	227.153398976697	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATCTGTTTTTAATT	NA	False	NA	NA	False	AATACA	-18	NA	27996413	27945664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985259_27985271_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.20	chr5	-	3837	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_17	226.502882002759	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996412	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27979024_27979117_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.21	chr5	-	5858	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1969	intron_retention	FALSE	non_canonical	0	0	junction_1	245.076688677918	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996405	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947503_27949114_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27962563_27963110_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.23	chr5	-	3495	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	32	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.66934904119	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996349	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947497_27949109_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.24	chr5	-	4294	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	10	-1969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.542771021642	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996371	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27948092_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.25	chr5	-	4219	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1969	intron_retention	FALSE	non_canonical	3	600	junction_13	74.3990513149536	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996405	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.27	chr5	-	4239	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	37	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	2	22	junction_20	171.504365833643	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996652	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
ES.25619.28	chr5	-	3716	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	6	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	180.974692526828	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996387	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27993600_27993776_27996196
ES.25619.29	chr5	-	3759	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	176.157770194789	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996413	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986406_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.3	chr5	-	5605	20	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	31	-1966	intron_retention	FALSE	canonical	3	600	junction_13	74.9808470465806	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGATTATTTAAAATT	NA	False	NA	0	True	AATAAA	-20	NA	27996658	27947043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.30	chr5	-	5602	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1969	intron_retention	FALSE	canonical	2	22	junction_19	175.883901521442	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996404	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
ES.25619.31	chr5	-	3987	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	20	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_17	180.300764421479	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996669	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27988678_27988772_27993640_27993776_27996196
ES.25619.32	chr5	-	3758	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	274.969721060338	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996409	27947046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949107_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986492_27988727_27988772_27993640_27993776_27996196
ES.25619.33	chr5	-	3628	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	2	16	junction_17	182.126295889202	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996404	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27993640_27993776_27996196
ES.25619.37	chr5	-	3734	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-10	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.542771021642	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996403	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947491_27949102_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.38	chr5	-	3695	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	66	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	3	29	junction_20	170.123896028747	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996623	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996456
ES.25619.39	chr5	-	5203	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1970	intron_retention	FALSE	canonical	1	3	junction_16	184.990056456163	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996405	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980597_27988727_27988772_27993640_27993776_27996196
ES.25619.4	chr5	-	4005	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	20	-1966	at_least_one_novel_splicesite	FALSE	non_canonical	3	600	junction_14	73.16930708979	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGATTATTTAAAATT	NA	False	NA	0	True	AATAAA	-20	NA	27996669	27947043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.41	chr5	-	3670	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	23	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	3	6	junction_20	174.668793721145	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996666	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996524
ES.25619.42	chr5	-	3737	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	230.376192346345	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996405	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949556_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970225_27970584_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.43	chr5	-	3609	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	238.575040315402	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996408	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.45	chr5	-	3765	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	176.58609090186	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996404	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986464_27988678_27988772_27993640_27993776_27996196
ES.25619.47	chr5	-	3789	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	228.130566903157	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996412	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27984777_27984823_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.5	chr5	-	7174	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	8	-1966	intron_retention	FALSE	non_canonical	3	600	junction_13	73.9639427014582	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGATTATTTAAAATT	NA	False	NA	0	True	AATAAA	-20	NA	27996373	27947043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.50	chr5	-	3724	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-3	-1970	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	170.612426276634	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996396	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947466_27949080_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.51	chr5	-	3734	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-31	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.916374554551	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996424	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947491_27949102_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.52	chr5	-	3820	19	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	40	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	243.696817560035	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996649	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986406_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.54	chr5	-	8253	18	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	-1970	intron_retention	FALSE	canonical	3	600	junction_12	78.1159638372873	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996408	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640
ES.25619.56	chr5	-	3696	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	172.343405539947	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996412	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971088_27971135_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.57	chr5	-	3715	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	231.153520414464	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996404	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985263_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.58	chr5	-	3751	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-18	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	176.58609090186	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996411	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986492_27988727_27988772_27993640_27993776_27996196
ES.25619.64	chr5	-	3822	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	3	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	267.486206650547	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996390	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27979024_27979117_27980563_27980678_27986419_27986492_27988727_27988772_27993640_27993776_27996196
ES.25619.65	chr5	-	4655	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-10	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	229.917593933131	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996403	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956127_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27987407_27988727_27988772_27993640_27993776_27996196
ES.25619.66	chr5	-	3793	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.569962752063	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996405	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986412_27986484_27988678_27988772_27993640_27993776_27996196
ES.25619.67	chr5	-	3717	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	12	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.698911621279	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996369	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947494_27949110_27949174_27949254_27949331_27949418_27949576_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.68	chr5	-	3812	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-20	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.713157524347	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996413	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27988409_27988541_27988727_27988772_27993640_27993776_27996196
ES.25619.70	chr5	-	3695	22	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	172.343405539947	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996405	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196_27996290_27996331
ES.25619.73	chr5	-	3739	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-15	-1970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.542771021642	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGGGTGATTATTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	27996408	27947047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947503_27949114_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.74	chr5	-	3771	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.713157524347	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996405	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27987877_27987977_27988727_27988772_27993640_27993776_27996196
ES.25619.75	chr5	-	6011	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-43	-1971	intron_retention	FALSE	non_canonical	3	600	junction_14	74.3341635255016	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996436	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27988772_27993640_27993776_27996196
ES.25619.76	chr5	-	5399	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1971	intron_retention	FALSE	canonical	0	0	junction_16	233.4796083173	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996412	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27984777_27984823_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.77	chr5	-	5329	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-3	-1971	intron_retention	FALSE	non_canonical	0	0	junction_17	277.121172132916	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996396	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953803_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27985259_27985307_27988727_27988772_27993640_27993776_27996196
ES.25619.79	chr5	-	3721	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-14	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	175.062124687209	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996407	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970605_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.8	chr5	-	3593	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-11	-1968	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_17	180.095588654002	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGGTGATTATTTAAAA	NA	False	NA	-2	True	AATAAA	-18	NA	27996404	27947045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980597_27988727_27988772_27993640_27993776_27996196
ES.25619.81	chr5	-	3719	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-16	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	2	12	junction_8	173.371018339283	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996409	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961971_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.82	chr5	-	3635	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-5	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_14	174.860344275081	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996398	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970682_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.83	chr5	-	3625	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	238.99248356845	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996405	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956204_27957741_27957845_27959482_27959554_27961950_27961995_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.88	chr5	-	4490	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-12	-1971	intron_retention	FALSE	non_canonical	3	600	junction_13	75.0023453003572	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996405	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.9	chr5	-	3707	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-19	-1968	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_11	176.193778266998	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGGTGATTATTTAAAA	NA	False	NA	-2	True	AATAAA	-18	NA	27996412	27947045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27965009_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.91	chr5	-	3722	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-7	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	176.401041663591	1042	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996400	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993649_27993776_27996196
ES.25619.94	chr5	-	3875	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	31	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_16	179.206515141755	1042	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27996658	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947498_27949108_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ES.25619.98	chr5	-	3315	11	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	4449	-1971	intron_retention	FALSE	non_canonical	0	0	junction_1	244.84983152945	1037	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27966286	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27947497_27949109_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367
ES.25619.99	chr5	-	4564	13	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	-205	-1971	intron_retention	FALSE	canonical	1	11	junction_2	215.120686411656	1040	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGGTGATTATTTA	NA	False	NA	-5	True	AATAAA	-15	NA	27970940	27947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_27949174_27949254_27949329_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588
ES.2562.1	chr10	+	191	1	Intergenic	novelGene_1945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGGCAGTGGTAACAC	NA	False	NA	NA	False	NA	NA	NA	33588534	33588725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_33588500_33588700
ES.25620.1	chr5	+	455	1	Intergenic	novelGene_21326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGCTTCAGGATCCCC	2265	False	NA	NA	False	NA	NA	NA	27996736	27997191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_27996700_27997200
ES.25621.1	chr5	-	180	1	Intergenic	novelGene_21327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATACCTAACTTTA	NA	False	NA	NA	False	NA	NA	NA	27998535	27998355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_27998400_27998500
ES.25622.1	chr5	+	3022	2	NNC	ENSMUSG00000039106.7	novel	5376	2	NA	NA	-11386	-1403	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATCATTTCTTTGTG	2851	False	NA	NA	False	AATAGA	-4	NA	28035760	28058683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28035851_28055751
ES.25622.2	chr5	+	3731	2	NNC	ENSMUSG00000039106.7	novel	5376	2	NA	NA	-11375	-683	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTAGTTTTTATTTTA	2862	False	NA	NA	False	AATAAA	-17	NA	28035771	28059403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28035851_28055751
ES.25622.3	chr5	+	7840	2	NNC	ENSMUSG00000039106.7	novel	5376	2	NA	NA	-11356	3445	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGAATGTAGTCATAT	2881	False	NA	NA	False	AATAAA	-19	NA	28035790	28063531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28035851_28055751
ES.25622.4	chr5	+	3345	2	FSM	ENSMUSG00000039106.7	ENSMUST00000036227.7	5376	2	628	1403	628	-1403	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATCATTTCTTTGTG	NA	False	NA	NA	False	AATAGA	-4	NA	28047774	28058683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28048188_28055751
ES.25623.1	chr5	+	154	1	Intergenic	novelGene_21328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	28262954	28263108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_28263000_28263100
ES.25624.1	chr5	+	2043	1	Intergenic	novelGene_21329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	28263183	28265226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_28263200_28265200
ES.25625.1	chr5	+	2818	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	-113	-8	-113	8	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGGTTTTCTTTTG	NA	False	NA	22	True	ATTAAA	-21	NA	28276247	28283668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.10	chr5	+	3918	3	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1139	junction_2	44.5	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTATTCCTGAGGT	NA	False	NA	13	True	ATTAAA	-12	NA	28276361	28283659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28276794_28278544_28280160_28281788
ES.25625.11	chr5	+	3782	4	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_2	558.148327557788	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276361	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28279923_28280059_28280160_28281788
ES.25625.12	chr5	+	4738	3	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	1	0	1	0	intron_retention	FALSE	canonical	3	1125	junction_2	51.5	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276361	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28276794_28278544_28278670_28279479
ES.25625.13	chr5	+	2603	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	470.18319833869	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276362	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788_28282235_28282319
ES.25625.14	chr5	+	2657	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	470.18319833869	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTATTCCTGAGGT	NA	False	NA	13	True	ATTAAA	-12	NA	28276362	28283659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788_28282226_28282262
ES.25625.15	chr5	+	2597	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	470.18319833869	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276362	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788_28283334_28283424
ES.25625.16	chr5	+	2340	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	2	355	2	-355	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGCTAAGACTGGAG	NA	False	NA	NA	False	AATAAA	-27	NA	28276362	28283305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.17	chr5	+	1868	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	2	827	2	784	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAGCTATTCCGGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	28276362	28282833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.18	chr5	+	2642	5	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	513.38508938223	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276362	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279525_28279647_28280059_28280160_28281788
ES.25625.19	chr5	+	7298	1	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	897	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276362	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28276400_28283700
ES.25625.2	chr5	+	2519	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	-26	204	-26	-204	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAATCTGAAGGATGCTT	NA	False	NA	NA	False	AATAAA	-26	NA	28276334	28283456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.20	chr5	+	2817	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	570.112480130018	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276362	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279479_28279647_28279800_28279923_28280059_28280160_28281788
ES.25625.21	chr5	+	6480	2	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	3	-7	intron_retention	FALSE	canonical	3	1125	junction_1	0	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276363	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28278670_28279479
ES.25625.22	chr5	+	2236	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	5	456	5	-456	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAACTACTTTGGCTAAA	NA	False	NA	NA	False	AGTAAA	-11	NA	28276365	28283204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.23	chr5	+	2399	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	470.18319833869	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276365	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788_28282987_28283272
ES.25625.24	chr5	+	2678	5	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	514.681637034002	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276365	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278670_28279486_28279647_28280059_28280160_28281788
ES.25625.25	chr5	+	3568	4	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	5	-210	intron_retention	FALSE	canonical	2	2	junction_2	558.148327557788	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTGAATCTGAAGG	NA	False	NA	NA	False	AATAAA	-20	NA	28276365	28283450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28279923_28280059_28280160_28281788
ES.25625.27	chr5	+	2509	4	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	559.089140179513	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276369	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276794_28278544_28278665_28280059_28280160_28281788
ES.25625.3	chr5	+	3117	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	-5	2	intron_retention	FALSE	canonical	3	1125	junction_2	45.6143252352445	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATTCCTGAGGTTTT	NA	False	NA	16	True	ATTAAA	-15	NA	28276355	28283662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28276794_28278544_28278670_28279479_28280160_28281788
ES.25625.4	chr5	+	4323	4	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	3	0	-3	intron_retention	FALSE	canonical	3	1125	junction_2	42.9444085093999	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTGTATTCCTGAG	NA	False	NA	11	True	ATTAAA	-10	NA	28276360	28283657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059
ES.25625.5	chr5	+	5549	2	ISM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	0	0	0	intron_retention	FALSE	canonical	3	1228	junction_1	0	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28276794_28278544
ES.25625.6	chr5	+	4853	3	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	-7	intron_retention	FALSE	canonical	3	1125	junction_1	7	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	False	NA	7	True	ATTAAA	-6	NA	28276361	28283653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28278670_28279479_28280160_28281788
ES.25625.7	chr5	+	2650	6	NNC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	470.18319833869	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTATTCCTGAGGT	NA	False	NA	13	True	ATTAAA	-12	NA	28276361	28283659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28276566_28276610_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ES.25625.8	chr5	+	3506	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	1139	junction_3	36.7362975210561	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276361	28283660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28276794_28278544_28279647_28280059_28280160_28281788
ES.25625.9	chr5	+	5669	2	FSM	ENSMUSG00000045294.12	ENSMUST00000199728.2	757	2	-3302	-1610	1	-1	multi-exon	FALSE	canonical	3	1139	junction_1	0	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTATTCCTGAGGT	NA	False	NA	13	True	ATTAAA	-12	NA	28276361	28283659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28280160_28281788
ES.25626.1	chr5	+	4094	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-327	-228	-327	228	multi-exon	FALSE	canonical	3	25	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTCAATGGATGAAATC	2102	False	NA	NA	False	ATTAAA	-24	NA	28370364	28377392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28372183_28375116
ES.25626.2	chr5	+	3909	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-324	-46	-324	46	multi-exon	FALSE	canonical	3	25	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTTTGTCCATGTCTGT	2105	False	NA	NA	False	AATAAA	-40	NA	28370367	28377210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28372183_28375116
ES.25626.3	chr5	+	2509	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-324	1354	-324	-1354	multi-exon	FALSE	canonical	3	25	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAATTTAAAAC	2105	False	NA	NA	False	NA	NA	NA	28370367	28375810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28372183_28375116
ES.25626.4	chr5	+	3056	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	-80	563	-80	-563	multi-exon	FALSE	canonical	3	25	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGTACTGTGTAAATT	2349	False	NA	NA	False	AATATA	-16	NA	28370611	28376601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28372183_28375116
ES.25626.5	chr5	+	1661	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	369	1509	369	-1509	multi-exon	FALSE	canonical	3	25	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTGTTTCAGAGGTT	2798	False	NA	NA	False	TATAAA	-16	NA	28371060	28375655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28372183_28375116
ES.25626.6	chr5	+	1738	2	NNC	ENSMUSG00000039095.9	novel	3539	2	NA	NA	2469	-446	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTCTTCTGTTTAGTG	70	False	NA	NA	False	AAAACA	-17	NA	28373160	28376718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28373297_28375116
ES.25627.1	chr5	-	3605	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	12	-1633	12	3	multi-exon	FALSE	canonical	3	175	junction_1	2	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGTGGTTTTGTTATA	NA	False	NA	NA	False	ATTAAA	-30	NA	28415008	28405813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.10	chr5	-	2169	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	57	-242	57	242	multi-exon	FALSE	canonical	3	175	junction_1	2	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGTGTCTGTGGTTAG	NA	False	NA	NA	False	NA	NA	NA	28414963	28407204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.11	chr5	-	1947	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	75	-38	75	38	multi-exon	FALSE	canonical	3	175	junction_1	2	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAGCTAAAATGGTTG	NA	False	NA	32	True	NA	NA	NA	28414945	28407408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.12	chr5	-	5861	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	122	-3322	-24	3	multi-exon	FALSE	canonical	3	179	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACTTGCATGAATAAC	NA	False	NA	-3	True	ATTAAA	-20	NA	28415044	28407443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28412382_28414121
ES.25627.13	chr5	-	1817	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	57	110	57	-110	multi-exon	FALSE	canonical	3	175	junction_1	2	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCTCATTGTCTCTGC	NA	False	NA	-116	True	NA	NA	NA	28414963	28407556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.14	chr5	-	1631	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	134	219	134	-219	multi-exon	FALSE	canonical	3	175	junction_1	2	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCACTCTTTTATGGG	NA	False	NA	NA	False	TATAAA	-16	NA	28414886	28407665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.15	chr5	-	1095	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	140	749	140	-749	multi-exon	FALSE	canonical	3	175	junction_1	2	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGGATGGAAGCTGGG	NA	False	NA	NA	False	TATAAA	-18	NA	28414880	28408195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.16	chr5	-	3517	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	205	-1061	59	753	multi-exon	FALSE	canonical	3	179	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTGGATATTTATTC	NA	False	NA	NA	False	NA	NA	NA	28414961	28409704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28412382_28414121
ES.25627.17	chr5	-	2722	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	252	-313	106	5	multi-exon	FALSE	canonical	3	179	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTCTCTAGTTCTAG	NA	False	NA	NA	False	AATAAA	-28	NA	28414914	28410452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28412382_28414121
ES.25627.2	chr5	-	7338	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	253	-4930	107	-19	multi-exon	FALSE	canonical	3	179	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACTATACTTGTAAG	NA	False	NA	NA	False	ATTAAA	-8	NA	28414913	28405835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28412382_28414121
ES.25627.3	chr5	-	3676	4	NNC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	98	-19	intron_retention	FALSE	canonical	1	1	junction_1	83.9100047008036	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACTATACTTGTAAG	NA	False	NA	NA	False	ATTAAA	-8	NA	28414922	28405835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_28408435_28409427_28409607_28412284_28412382_28414121
ES.25627.4	chr5	-	6517	3	NNC	ENSMUSG00000044681.20	novel	2661	2	NA	NA	91	-813	intron_retention	FALSE	non_canonical	0	0	junction_1	89.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCTCTCTGCCTGT	NA	False	NA	-1	True	ATTAAA	-28	NA	28414929	28406629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_28409001_28409043_28412382_28414121
ES.25627.5	chr5	-	2899	4	NNC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	-30	-814	intron_retention	FALSE	canonical	0	0	junction_3	83.4545784643759	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTGTCTCTCTGCCTG	NA	False	NA	-2	True	ATTAAA	-27	NA	28415391	28406630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_28408435_28412284_28412382_28414121_28415063_28415334
ES.25627.6	chr5	-	2235	4	NNC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	195	-814	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	81.5693297481079	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTGTCTCTCTGCCTG	NA	False	NA	-2	True	ATTAAA	-27	NA	28414825	28406630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_28408435_28412284_28412382_28414121_28414326_28414695
ES.25627.7	chr5	-	6513	2	FSM	ENSMUSG00000044681.20	ENSMUST00000117098.2	2661	2	282	-4134	136	815	multi-exon	FALSE	canonical	3	179	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCACTGTCTCTCTGCCT	NA	False	NA	-3	True	ATTAAA	-26	NA	28414884	28406631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28412382_28414121
ES.25627.8	chr5	-	3169	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	-371	-814	-30	814	multi-exon	FALSE	canonical	3	175	junction_1	2	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCACTGTCTCTCTGCC	NA	False	NA	-4	True	ATTAAA	-25	NA	28415391	28406632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_28408435_28412284_28412382_28414121
ES.25627.9	chr5	-	2874	4	NNC	ENSMUSG00000044681.20	novel	3018	4	NA	NA	97	808	intron_retention	FALSE	canonical	1	1	junction_1	83.9100047008036	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGAGCCACTGTCTC	NA	False	NA	-10	True	ATTAAA	-19	NA	28414923	28406638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_28408435_28409427_28409607_28412284_28412382_28414121
ES.25628.1	chr5	+	177	1	Intergenic	novelGene_21330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCCTTATCACTA	NA	False	NA	NA	False	NA	NA	NA	28424224	28424401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_28424200_28424400
ES.25629.1	chr5	+	6699	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-319	3130	-263	4	multi-exon	TRUE	canonical	3	71	junction_15	26.3991792801721	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCTGTGTATTATTT	NA	False	NA	11	True	CATAAA	-25	NA	28521855	28621107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.10	chr5	+	4136	6	FSM	ENSMUSG00000048271.15	ENSMUST00000090355.11	1032	6	-206	-2898	-206	14	multi-exon	FALSE	canonical	3	22	junction_5	51.3443278269372	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGAGTGTTTGCCTGA	NA	False	NA	NA	False	AATAAA	-30	NA	28521912	28560591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469
ES.25629.11	chr5	+	3900	13	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-176	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	42.2994450974898	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	False	NA	1	True	CATAAA	-15	NA	28521942	28621097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592959_28619477
ES.25629.12	chr5	+	6441	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-156	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	38.2290449337047	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	False	NA	1	True	CATAAA	-15	NA	28521962	28621097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596032_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.14	chr5	+	6459	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-200	3251	-144	-117	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTAGCTATTTGTTAGT	NA	False	NA	NA	False	ATTAAA	-35	NA	28521974	28620986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.15	chr5	+	9711	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	-195	-6	-139	6	multi-exon	FALSE	canonical	3	71	junction_15	26.3991792801721	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGAGTTTATTTTCTTT	NA	False	NA	10	True	AATAAA	-22	NA	28521979	28624243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.16	chr5	+	4204	8	NNC	ENSMUSG00000048271.15	novel	3955	7	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.3868772177258	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATTTTGTATGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	28522029	28560577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28534379_28534459_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ES.25629.18	chr5	+	5547	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-41	-1551	-16	1551	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGATTATTATGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	28522158	28562128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ES.25629.2	chr5	+	851	1	Genic_Genomic	ENSMUSG00000048271.15	novel	NA	NA	NA	NA	-262	-34986	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTGTTTGGCAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	28521856	28522707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_28521900_28522700
ES.25629.20	chr5	+	6261	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-14	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.2206887153026	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACATCTTAGCTATTT	NA	False	NA	NA	False	ATTAAA	-29	NA	28522160	28620980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592650_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.21	chr5	+	6371	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8739493482004	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATGCATTAACCCTCAT	NA	False	NA	-2	True	CATAAA	-12	NA	28522161	28621094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522400_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.22	chr5	+	6391	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.7374254843143	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTAACCCTCATCTGTG	NA	False	NA	3	True	CATAAA	-17	NA	28522161	28621099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547519_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.23	chr5	+	6502	20	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.3246051607242	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATTATTTGTTCAC	NA	False	NA	17	True	CATAAA	-31	NA	28522163	28621113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28582228_28582334_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.24	chr5	+	6509	20	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.3246051607242	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	False	NA	1	True	CATAAA	-15	NA	28522164	28621097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28582228_28582358_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.25	chr5	+	6266	18	NNC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	41.008565229051	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	6	True	CATAAA	-20	NA	28522164	28621102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618363_28618553
ES.25629.27	chr5	+	6054	17	NIC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	41.8180115948858	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAACCCTCATCTGTGTA	NA	False	NA	5	True	CATAAA	-19	NA	28522164	28621101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28615568_28615758_28618284_28618374_28618565
ES.25629.28	chr5	+	9402	18	NIC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-10	5	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	36.3348517719172	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGAGTTTATTTTCTT	NA	False	NA	9	True	AATAAA	-21	NA	28522164	28624242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.29	chr5	+	6163	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	41.8568990729127	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTAACCCTCATCTGTG	NA	False	NA	3	True	CATAAA	-17	NA	28522164	28621099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592833_28592928_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.30	chr5	+	5706	20	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-6	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	37.2132434056015	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	False	NA	1	True	CATAAA	-15	NA	28522168	28621097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565_28619869_28620535
ES.25629.31	chr5	+	6244	18	NNC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	40.6454839228394	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAATGCATTAACCCTC	NA	False	NA	-4	True	CATAAA	-10	NA	28522168	28621092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613256_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.33	chr5	+	6336	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	41.4610109874176	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	False	NA	1	True	CATAAA	-15	NA	28522190	28621097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563283_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592650_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.34	chr5	+	6351	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.7984012334182	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522190	28621103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592650_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.36	chr5	+	5912	17	NIC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	39.2601499615068	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTAACCCTCATCTGTG	NA	False	NA	3	True	CATAAA	-17	NA	28522198	28621099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.38	chr5	+	9207	18	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	22	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.167974801268	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGAGTTTATTTTCTT	NA	False	NA	9	True	AATAAA	-21	NA	28522221	28624242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596032_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.39	chr5	+	5568	16	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	22072	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.1192185487332	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCTGTGTATTATTT	5779	False	NA	11	True	CATAAA	-25	NA	28544271	28621107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592833_28592924_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.4	chr5	+	6651	19	NNC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	-248	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	34.8295674023106	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCTGTGTATTATTT	NA	False	NA	11	True	CATAAA	-25	NA	28521870	28621107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566976_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.40	chr5	+	5505	13	ISM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	35293	1	35268	-1	3prime_fragment	FALSE	canonical	3	71	junction_9	13.91317321422	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCCTCATCTGTGTAT	NA	False	NA	6	True	CATAAA	-20	NA	28557467	28621102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.41	chr5	+	5325	12	ISM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	41096	8	-35782	-8	3prime_fragment	FALSE	canonical	3	71	junction_8	14.3676634170667	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGCATTAACCCTCATC	NA	False	NA	-1	True	CATAAA	-13	NA	28563270	28621095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.42	chr5	+	5637	4	ISM	ENSMUSG00000048271.15	ENSMUST00000144967.8	1211	5	11577	-2419	-5029	-9	3prime_fragment	FALSE	canonical	3	107	junction_1	5.18544972870135	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATGCATTAACCCTCAT	NA	False	NA	-2	True	CATAAA	-12	NA	28610629	28621094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.43	chr5	+	6236	1	NIC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	2338	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGCTTTGAAGAGT	NA	False	NA	-1	True	AATAAA	-11	NA	28617996	28624232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_28618000_28624200
ES.25629.5	chr5	+	4285	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-318	-12	-237	12	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGAGTGTTTGCCT	NA	False	NA	NA	False	AATAAA	-28	NA	28521881	28560589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ES.25629.6	chr5	+	2373	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-316	1898	-235	986	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGGTGTTCTGCCTGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	28521883	28558679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ES.25629.7	chr5	+	6550	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	-290	-4	-234	4	multi-exon	FALSE	canonical	3	22	junction_5	33.4726040951925	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCTGTGTATTATTT	NA	False	NA	11	True	CATAAA	-25	NA	28521884	28621107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.25629.8	chr5	+	1381	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	-309	2883	-228	1	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTTTCCTTGATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	28521890	28557694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ES.25629.9	chr5	+	6393	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	-263	126	-207	-126	multi-exon	FALSE	canonical	3	22	junction_5	33.4726040951925	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCAACATCTTAGCTA	NA	False	NA	NA	False	ATTAAA	-26	NA	28521911	28620977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ES.2563.1	chr10	+	3572	6	FSM	ENSMUSG00000039552.15	ENSMUST00000169670.8	3650	6	-63	141	-63	-141	multi-exon	FALSE	canonical	1	2	junction_2	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATGTTTAGAGTTTTT	NA	False	NA	4	True	AATAAA	-14	NA	33781043	33791876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_33781835_33784062_33784298_33785008_33785747_33787501_33787647_33788957_33789076_33790331
ES.2563.2	chr10	+	3968	6	FSM	ENSMUSG00000039552.15	ENSMUST00000169670.8	3650	6	9	-327	9	327	multi-exon	FALSE	canonical	1	2	junction_2	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGAGAGGTGTGATACAA	NA	False	NA	NA	False	ATTAAA	-32	NA	33781115	33792344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_33781835_33784062_33784298_33785008_33785747_33787501_33787647_33788957_33789076_33790331
ES.2563.3	chr10	+	1309	3	ISM	ENSMUSG00000039552.15	ENSMUST00000169670.8	3650	6	96	6567	96	-6567	5prime_fragment	FALSE	canonical	1	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAAAATCAAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	33781202	33785450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_33781835_33784062_33784298_33785008
ES.25630.1	chr5	-	1634	1	Intergenic	novelGene_21331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28531078	28529444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_28529400_28531100
ES.25631.1	chr5	-	175	1	Intergenic	novelGene_21332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28860693	28860518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_28860500_28860700
ES.25632.1	chr5	+	2215	9	NNC	ENSMUSG00000029130.13	novel	1107	8	NA	NA	-116	-4	intron_retention	FALSE	canonical	0	0	junction_1	16.2307578381294	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATGTAGCTAGTGT	NA	False	NA	85	True	AATAAA	-15	NA	29400873	29430516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29400907_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411227_29411297_29411693_29411803_29429114
ES.25632.10	chr5	+	3344	6	NNC	ENSMUSG00000029130.13	novel	1738	8	NA	NA	-22	1849	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	15.7936696179197	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATGACTTTGTGGTGT	NA	False	NA	NA	False	TATAAA	-15	NA	29401033	29414498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29401111_29402923_29403019_29403571_29403837_29410666_29410700_29411227_29411297_29411693
ES.25632.11	chr5	+	900	5	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	-7	-42	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.71537451386	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29401048	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29411693_29411803_29430040
ES.25632.12	chr5	+	1449	10	FSM	ENSMUSG00000029130.13	ENSMUST00000001247.12	1600	10	64	87	3	-46	multi-exon	FALSE	canonical	3	8	junction_1	13.0421917418852	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAACTGTGGTCTTTATT	NA	False	NA	2	True	AATATA	-8	NA	29401058	29430433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ES.25632.13	chr5	+	1480	10	NNC	ENSMUSG00000029130.13	novel	1600	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	14.9054634113191	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAGCTAGTGTCTGA	NA	False	NA	89	True	AATAAA	-19	NA	29401058	29430520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411227_29411297_29411693_29411803_29429114_29429283_29430040
ES.25632.14	chr5	+	1710	9	NNC	ENSMUSG00000029130.13	novel	1600	10	NA	NA	1	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.5298026304006	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29401082	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29401514_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411227_29411297_29411693_29411803_29429114_29429283_29430040
ES.25632.15	chr5	+	2949	1	FSM	ENSMUSG00000089975.3	ENSMUST00000162836.3	842	1	-1367	-740	-1367	740	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCACCTTTAAGGTGAC	NA	False	NA	NA	False	AATAAA	-41	NA	29421354	29424303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29421400_29424300
ES.25632.16	chr5	+	3711	1	FSM	ENSMUSG00000029130.13	ENSMUST00000163050.5	4672	1	-2057	3018	-2057	-42	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29426726	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29426700_29430400
ES.25632.2	chr5	+	1515	10	NNC	ENSMUSG00000029130.13	novel	1107	8	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9145715474647	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTAGCTAGTGTCTGA	NA	False	NA	89	True	AATAAA	-19	NA	29400875	29430520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29400907_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ES.25632.3	chr5	+	1638	8	NNC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	-1	-6486	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.1017532130939	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTACCAGTGTATC	NA	False	NA	NA	False	AATAAA	-30	NA	29400988	29423803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29401083_29402923_29403019_29403622_29403837_29408052_29408196_29410666_29410700_29411227_29411297_29411693_29411803_29422922
ES.25632.4	chr5	+	4797	7	NNC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	0	3143	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	13.5943207096035	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAGAGAAGGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	29400989	29415792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411227_29411297_29411693
ES.25632.5	chr5	+	2297	7	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	0	-42	intron_retention	FALSE	canonical	3	13	junction_1	11.7957148528137	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29400989	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29411803_29429114_29429283_29430040
ES.25632.6	chr5	+	1123	6	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	1	-42	combination_of_known_splicesites	TRUE	canonical	2	3	junction_3	17.765134392962	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29400993	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29411693_29411803_29429114_29429283_29430040
ES.25632.7	chr5	+	1533	9	NIC	ENSMUSG00000029130.13	novel	1600	10	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	12.7646974112197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTAGCTAGTGTCTG	NA	False	NA	88	True	AATAAA	-18	NA	29400994	29430519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29401111_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ES.25632.8	chr5	+	998	5	NIC	ENSMUSG00000029130.13	novel	1565	10	NA	NA	6	-42	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	17.4266319178434	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGTCTTTATTGCAT	NA	False	NA	6	True	AATATA	-12	NA	29401009	29430437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29401083_29402923_29403019_29403571_29403837_29429114_29429283_29430040
ES.25632.9	chr5	+	3629	8	FSM	ENSMUSG00000029130.13	ENSMUST00000160887.6	1738	8	-44	-1847	8	1847	multi-exon	FALSE	canonical	3	8	junction_1	12.4605499927752	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATATGACTTTGTGGT	NA	False	NA	NA	False	TATAAA	-13	NA	29401011	29414496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693
ES.25633.1	chr5	+	3674	1	Intergenic	novelGene_21333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGAATACCCAAGATAC	8021	False	NA	NA	False	NA	NA	NA	29442728	29446402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29442700_29446400
ES.25634.1	chr5	-	4792	16	NNC	ENSMUSG00000010721.16	novel	4836	17	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.8497661784809	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTGTTTTATAAGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	29583333	29434801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497965_29551760_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.10	chr5	-	2564	16	NNC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	-3	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.0042956812004	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	-1	True	AGTAAA	-14	NA	29583303	29436972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459295_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.11	chr5	-	2755	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-4	2175	2	142	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTTGAATTTAGTT	NA	False	NA	-3	True	AGTAAA	-12	NA	29583386	29436974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.12	chr5	-	2851	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	-2	142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.1825656966364	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTTGAATTTAGTT	NA	False	NA	-3	True	AGTAAA	-12	NA	29583384	29436974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439810_29439909_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.13	chr5	-	2835	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	2	142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.0001017705075	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTTGAATTTAGTT	NA	False	NA	-3	True	AGTAAA	-12	NA	29583386	29436974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439810_29439909_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497838_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.14	chr5	-	2652	15	NNC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	4839	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	15.4635846096431	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAATTGTTGAATTTAGT	NA	False	NA	-4	True	AGTAAA	-11	NA	29561249	29436975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463756_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29560978
ES.25634.15	chr5	-	2633	16	NNC	ENSMUSG00000010721.16	novel	4836	17	NA	NA	26	140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.8497661784809	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAATTGTTGAATTTAG	NA	False	NA	-5	True	AGTAAA	-10	NA	29583356	29436976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497958_29551760_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.16	chr5	-	3607	17	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	2	-3	intron_retention	FALSE	canonical	2	5	junction_16	13.9955350022784	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCCACTCTGTGCTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	29583386	29437373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29570205_29583124
ES.25634.17	chr5	-	2329	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	18	2579	18	-8	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTACTCCACTCTGTG	NA	False	NA	NA	False	TTTAAA	-12	NA	29583364	29437378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.18	chr5	-	3506	1	FSM	ENSMUSG00000105741.2	ENSMUST00000199610.2	4296	1	1810	-1020	1810	1020	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCCTGGAGACACATAG	NA	False	NA	NA	False	AATAAA	-35	NA	29483485	29479979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_29480000_29483500
ES.25634.19	chr5	-	5809	9	NNC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	14	-18443	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.104414938018	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGGAGTTTGGGAAA	NA	False	NA	NA	False	GATAAA	-15	NA	29583368	29481517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29486432_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29568880_29568954_29583124
ES.25634.2	chr5	-	3136	17	NNC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	-23	576	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_11	13.3369786683491	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGTCTCTAATTTTC	NA	False	NA	NA	False	CATAAA	-15	NA	29583351	29436540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497838_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.20	chr5	-	1940	7	NIC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	9	-28083	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.1032059355937	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	29583373	29491157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_29492462_29496270_29496336_29497149_29497219_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.3	chr5	-	3006	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	-18	147	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	15.0406600017153	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTAGTTTCTTT	NA	False	NA	2	True	AGTAAA	-17	NA	29583346	29436969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29569918_29570205_29583124
ES.25634.4	chr5	-	2895	17	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	7	147	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	15.6922303625074	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTAGTTTCTTT	NA	False	NA	2	True	AGTAAA	-17	NA	29583375	29436969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29566045_29566086_29568880_29568954_29569918_29570205_29583124
ES.25634.5	chr5	-	2883	18	NNC	ENSMUSG00000010721.16	novel	3422	18	NA	NA	2	147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.6689364965927	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTAGTTTCTTT	NA	False	NA	2	True	AGTAAA	-17	NA	29583386	29436969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29553682_29553806_29566045_29566086_29568880_29568954_29583124
ES.25634.6	chr5	-	4393	3	ISM	ENSMUSG00000010721.16	ENSMUST00000196321.5	3422	18	122503	-144	36415	144	intron_retention	FALSE	canonical	3	26	junction_2	3	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	-1	True	AGTAAA	-14	NA	29460797	29436972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_29438147_29439975_29440138_29457740
ES.25634.7	chr5	-	2635	16	NIC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	-17	144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	14.8802628411672	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	-1	True	AGTAAA	-14	NA	29583345	29436972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.8	chr5	-	2736	17	NNC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	-1	144	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_11	13.3369786683491	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	-1	True	AGTAAA	-14	NA	29583383	29436972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497838_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ES.25634.9	chr5	-	2249	10	NIC	ENSMUSG00000010721.16	novel	4926	17	NA	NA	2	144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.1717384593979	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTGAATTTAGTTTC	NA	False	NA	-1	True	AGTAAA	-14	NA	29583386	29436972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_29438147_29439975_29440138_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29568880_29568954_29583124
ES.25635.1	chr5	+	3472	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	13	5734	13	-5734	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATGATTGTGTTAGGT	2972	False	NA	NA	False	NA	NA	NA	29639674	29657107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.10	chr5	+	2894	10	ISM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	28	7634	28	3854	5prime_fragment	FALSE	canonical	3	157	junction_8	16.0285239572118	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTTTATT	2987	False	NA	NA	False	NA	NA	NA	29639689	29655207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579
ES.25635.11	chr5	+	3281	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	31	5907	31	5581	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGCAGGCTCTTAAGTGA	2990	False	NA	NA	False	NA	NA	NA	29639692	29656934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.12	chr5	+	8659	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	32	528	32	-528	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGCTGTGTCCTTCT	2991	False	NA	NA	False	NA	NA	NA	29639693	29662313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.13	chr5	+	2821	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	32	6366	32	5122	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGGCACGTGTCTT	2991	False	NA	6	True	TTTAAA	-8	NA	29639693	29656475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.14	chr5	+	4222	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	32	4965	32	-4965	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTAACTTACCTTTT	2991	False	NA	NA	False	AAAAAG	-7	NA	29639693	29657876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.15	chr5	+	2219	10	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	32	2249	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	72.9748815232566	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAG	2991	False	NA	NA	False	NA	NA	NA	29639693	29653602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29653382
ES.25635.16	chr5	+	2557	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	32	5121	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	2991	False	NA	5	True	TTTAAA	-7	NA	29639693	29656474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.17	chr5	+	4596	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	33	4590	33	-4590	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCTGTCTGTGTGATG	2992	False	NA	NA	False	NA	NA	NA	29639694	29658251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.19	chr5	+	3321	12	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	42	5096	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	80.7499968016784	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGGTTAAAAGTTTAAAA	3001	False	NA	-20	True	CATAAA	-28	NA	29639703	29656449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29641244_29642044_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.2	chr5	+	2517	10	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	13	2265	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	56.5213823846044	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGATCTTCCTACTTC	2972	False	NA	NA	False	NA	NA	NA	29639674	29653618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29653382
ES.25635.20	chr5	+	3481	12	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	44	5574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.9252301269042	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGCGAGCAGGCTCT	3003	False	NA	NA	False	NA	NA	NA	29639705	29656927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29641244_29641346_29642594_29642791_29644823_29645200_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29655254_29655450_29656026
ES.25635.21	chr5	+	4776	9	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	45	5574	intron_retention	FALSE	canonical	3	16	junction_4	57.9849118305788	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAGCGAGCAGGCTCT	3004	False	NA	NA	False	NA	NA	NA	29639706	29656927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651944_29654579
ES.25635.22	chr5	+	4535	10	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	50	5578	intron_retention	FALSE	canonical	3	16	junction_3	55.4305259751028	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGAGCAGGCTCTTAAG	3009	False	NA	NA	False	NA	NA	NA	29639711	29656931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.23	chr5	+	4076	10	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5121	intron_retention	FALSE	canonical	3	16	junction_3	55.4305259751028	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	3011	False	NA	5	True	TTTAAA	-7	NA	29639713	29656474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.24	chr5	+	3525	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5121	intron_retention	FALSE	canonical	1	4	junction_9	73.4030653310882	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	3011	False	NA	5	True	TTTAAA	-7	NA	29639713	29656474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651944_29653382_29653666_29654579_29654690_29656026
ES.25635.25	chr5	+	4173	10	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5118	intron_retention	FALSE	canonical	2	10	junction_8	74.6673280393989	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCACATGGTGGCACGTG	3011	False	NA	2	True	TTTAAA	-4	NA	29639713	29656471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651944_29653382_29654690_29656026
ES.25635.26	chr5	+	2894	12	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	60	5122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.6702734693649	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGGCACGTGTCTT	3019	False	NA	6	True	TTTAAA	-8	NA	29639721	29656475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29641244_29641346_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.29	chr5	+	1748	9	ISM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	2930	6366	2930	5122	3prime_fragment	FALSE	canonical	3	157	junction_6	17.7125485179293	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGGCACGTGTCTT	5889	False	NA	6	True	TTTAAA	-8	NA	29642591	29656475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.3	chr5	+	2510	10	NIC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	13	5116	combination_of_known_splicesites	FALSE	canonical	2	24	junction_3	51.2445119012758	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCACATGGTGGCACG	2972	False	NA	0	True	TTTAAA	-2	NA	29639674	29656469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29640642_29640927_29641056_29642594_29642791_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.30	chr5	+	1549	8	ISM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	5160	6368	-1494	5120	3prime_fragment	FALSE	canonical	3	157	junction_5	15.3689323517495	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACATGGTGGCACGTGTC	8119	False	NA	4	True	TTTAAA	-6	NA	29644821	29656473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.31	chr5	+	7469	6	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	-283	5740	intron_retention	TRUE	non_canonical	0	0	junction_2	86.5364663017852	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAACAGATAACA	9330	False	NA	NA	False	NA	NA	NA	29646032	29657093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29646440_29647491_29647660_29648352_29649845_29649912_29651370_29651811_29654690_29656026
ES.25635.32	chr5	+	6675	3	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	2536	5578	intron_retention	FALSE	non_canonical	0	0	junction_1	98.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGAGCAGGCTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	29648851	29656931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29649845_29649912_29654690_29656026
ES.25635.33	chr5	+	3477	1	NIC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	5386	3825	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29651701	29655178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29651700_29655200
ES.25635.34	chr5	+	7427	2	ISM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	13892	524	7238	-524	3prime_fragment	FALSE	canonical	3	197	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTCCTTCTGACA	NA	False	NA	NA	False	NA	NA	NA	29653553	29662317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29654690_29656026
ES.25635.35	chr5	+	1860	1	NIC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	8919	5741	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAACAGATAACAT	NA	False	NA	NA	False	NA	NA	NA	29655234	29657094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29655200_29657100
ES.25635.4	chr5	+	3037	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	13	5582	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCAGGCTCTTAAGTGAG	2972	False	NA	NA	False	NA	NA	NA	29639674	29656935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.5	chr5	+	3193	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	16	5741	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAACAGATAACAT	2975	False	NA	NA	False	NA	NA	NA	29639677	29657094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.6	chr5	+	3005	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	17	6197	17	5291	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTGCTTAGGCTCTGA	2976	False	NA	NA	False	AAAAAG	-19	NA	29639678	29656644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.7	chr5	+	4860	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	19	4340	19	-4340	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAACTTTTAAGCTATT	2978	False	NA	NA	False	AATAAA	-22	NA	29639680	29658501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ES.25635.9	chr5	+	4172	9	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	27	3855	intron_retention	FALSE	canonical	3	16	junction_3	57.6405889976846	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAATTTTTATTT	2986	False	NA	NA	False	NA	NA	NA	29639688	29655208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29640642_29640927_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579
ES.25636.1	chr5	-	188	1	Intergenic	novelGene_21334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTGAATATGGA	NA	False	NA	NA	False	NA	NA	NA	29701647	29701459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29701500_29701600
ES.25637.1	chr5	+	5198	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-153	3	-153	-3	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACTGGTCAGTTGTGT	NA	False	NA	35	True	ATTAAA	-35	NA	29774086	29881087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.10	chr5	+	5249	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-29	-172	-29	172	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGATTCTCTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	29774210	29881262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.100	chr5	+	325	1	Intergenic	novelGene_21341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	29902755	29903080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29902800_29903100
ES.25637.11	chr5	+	4233	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-29	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.055390459254	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774210	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.12	chr5	+	4397	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-29	-754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.433590018897	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29774210	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29857588_29857663_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.16	chr5	+	4796	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-21	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	141.904460934313	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAGTCTTGATACATAG	NA	False	NA	4	True	AATAAA	-15	NA	29774218	29880823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824558_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.17	chr5	+	4426	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-20	-754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.456017605328	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29774219	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29861704_29861817_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.18	chr5	+	4949	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-19	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.055390459254	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774220	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.19	chr5	+	4221	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-19	-754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	144.085431498982	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29774220	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824292_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.2	chr5	+	4239	21	NIC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-71	-751	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	149.374186190252	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774168	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29774579_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.21	chr5	+	4949	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-19	118	-19	-118	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTTTGTATTTTTTT	NA	False	NA	8	True	GATAAA	-1	NA	29774220	29880972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.22	chr5	+	5031	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-19	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	143.451463269113	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774220	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840639_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.23	chr5	+	4705	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-19	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.055390459254	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774220	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.24	chr5	+	4320	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-18	-754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.861561093749	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29774221	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774587_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.26	chr5	+	4258	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-18	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	143.90863866006	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774221	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863264_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.27	chr5	+	4939	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-18	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.570831932411	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774221	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851587_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.28	chr5	+	4979	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-17	-269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	166.267452571148	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774222	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29797116_29797301_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812092_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.3	chr5	+	4358	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-61	751	-61	-751	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774178	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.33	chr5	+	4085	21	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.374186190252	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAAGTGGCGGGCTGCG	NA	False	NA	17	True	ATTAAA	-9	NA	29774223	29880332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774440_29795760_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.35	chr5	+	4435	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.786745653004	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774223	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29776906_29777029_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.36	chr5	+	4391	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	166.74318344374	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774223	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29850812_29850891_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.37	chr5	+	5133	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.433590018897	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCACTGGTCAGTTGT	NA	False	NA	33	True	ATTAAA	-33	NA	29774223	29881085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29857588_29857663_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.4	chr5	+	3347	22	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-56	-10030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	146.369364723993	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGATGACTCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	29774183	29871060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29870992
ES.25637.41	chr5	+	4211	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.570831932411	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774223	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851587_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.42	chr5	+	4958	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.570831932411	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774223	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851566_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.43	chr5	+	4692	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-15	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.570831932411	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774224	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851587_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.44	chr5	+	5236	11	ISM	ENSMUSG00000039000.9	ENSMUST00000199032.2	3171	14	-219	13960	-15	-13960	5prime_fragment	FALSE	canonical	0	0	junction_10	155.546423938321	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTGAAAGCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	29774224	29823522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905
ES.25637.45	chr5	+	4205	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-15	-754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.672527937264	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29774224	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836299_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851480_29851587_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.47	chr5	+	6750	9	ISM	ENSMUSG00000039000.9	ENSMUST00000199032.2	3171	14	-218	24817	-14	6943	intron_retention	FALSE	canonical	3	396	junction_1	49.8873731519309	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	29774225	29812665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193
ES.25637.49	chr5	+	5143	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-14	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	185.467385889631	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29774225	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29861704_29861817_29863207_29863417_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.5	chr5	+	4479	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-53	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.636627412652	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774186	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872451_29872581_29872911_29873043_29879396
ES.25637.50	chr5	+	3820	20	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-14	15038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	218.263113474543	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAACTGTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	29774225	29852520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29776906_29777029_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29850825_29850891_29851407
ES.25637.51	chr5	+	5102	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-14	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.633904782497	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774225	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29850825_29850891_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.6	chr5	+	4176	22	NIC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-36	-756	combination_of_known_splicesites	TRUE	canonical	0	0	junction_8	143.46657309761	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAAGTGGCGGGCTGCGTC	NA	False	NA	19	True	ATTAAA	-11	NA	29774203	29880334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.60	chr5	+	5044	25	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-11	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	181.880221383623	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774228	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851587_29851656_29861704_29861817_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.61	chr5	+	4705	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-7	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.570831932411	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774232	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851486_29851566_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.63	chr5	+	4728	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-6	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	143.90863866006	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774233	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863264_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.65	chr5	+	4794	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-3	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	184.610907439289	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTAGTCTTGATACAT	NA	False	NA	2	True	AATAAA	-13	NA	29774236	29880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812097_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29850825_29850891_29851407_29851656_29863264_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.66	chr5	+	5013	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-3	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	141.761738476458	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29774236	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811915_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.70	chr5	+	5164	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	3	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	185.590856384508	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29774242	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794889_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872434_29872585_29872911_29873043_29879396
ES.25637.72	chr5	+	4904	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	3	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	140.974692388882	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTGGAGTTTTGCC	NA	False	NA	13	True	ATTAAA	-13	NA	29774242	29881065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396_29880728_29880843
ES.25637.73	chr5	+	4285	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	3	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.861561093749	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774242	29880339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792281_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.76	chr5	+	3618	18	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	6	28565	6	15043	5prime_fragment	FALSE	canonical	0	0	junction_10	121.655478147603	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTGTGTATATGG	NA	False	NA	NA	False	AATAAA	-23	NA	29774245	29852525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407
ES.25637.78	chr5	+	3484	18	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	42	15038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	156.647136135697	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAACTGTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	29774281	29852520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407
ES.25637.8	chr5	+	5206	24	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-35	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	166.636627412652	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCACTGGTCAGTTGT	NA	False	NA	33	True	ATTAAA	-33	NA	29774204	29881085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872451_29872580_29872911_29873043_29879396
ES.25637.80	chr5	+	5090	24	NIC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-88	-26	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	166.267452571148	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGTTGGAGTTTTGC	NA	False	NA	12	True	ATTAAA	-12	NA	29774355	29881064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29797116_29797301_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.81	chr5	+	4562	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-66	-268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	144.079100462498	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAGTCTTGATACATA	NA	False	NA	3	True	AATAAA	-14	NA	29774377	29880822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806209_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.83	chr5	+	4424	22	NIC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-2	-268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	146.366978916034	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAGTCTTGATACATA	NA	False	NA	3	True	AATAAA	-14	NA	29774441	29880822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.84	chr5	+	5210	21	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	235	10028	-9	-10028	5prime_fragment	FALSE	canonical	0	0	junction_10	112.500433332499	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGACTCAGTGTATA	NA	False	NA	NA	False	NA	NA	NA	29774474	29871062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773
ES.25637.88	chr5	+	3562	18	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	29614	758	8027	-758	3prime_fragment	FALSE	canonical	0	0	junction_5	118.900120918043	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAAGTGGCGGGCTGCG	NA	False	NA	17	True	ATTAAA	-9	NA	29803853	29880332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.9	chr5	+	4858	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	-35	225	-35	-225	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTTTGTTTGGGG	NA	False	NA	46	True	AAGAAA	-16	NA	29774204	29880865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.90	chr5	+	4483	1	NIC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	-16871	-13960	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTGAAAGCAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	29819039	29823522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29819000_29823500
ES.25637.91	chr5	+	5987	6	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	73696	27	12025	-27	3prime_fragment	FALSE	canonical	3	448	junction_4	23.0529824534701	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29847935	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.92	chr5	+	4497	6	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	25194	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	240.200749374351	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29861104	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29863421_29868460_29868650_29868773_29868841_29872451_29872579_29872911_29873043_29879396
ES.25637.93	chr5	+	2743	5	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	87765	754	26094	-754	3prime_fragment	FALSE	canonical	3	448	junction_3	25.7038421252543	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29862004	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ES.25637.94	chr5	+	1868	3	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	94531	27	32860	-27	3prime_fragment	FALSE	canonical	3	448	junction_1	35.5	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTGTTGGAGTTTTG	NA	False	NA	11	True	ATTAAA	-11	NA	29868770	29881063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29868841_29872911_29873043_29879396
ES.25637.95	chr5	+	4102	3	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	33639	-754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.5	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCGGGCTGCGTCTC	NA	False	NA	21	True	ATTAAA	-13	NA	29869549	29880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29872581_29872911_29873043_29879396
ES.25637.96	chr5	+	177	2	Intergenic	novelGene_21337	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	844	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAATACAGCCA	NA	False	NA	NA	False	NA	NA	NA	29877737	29902928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29877759_29902772
ES.25637.97	chr5	+	153	1	Intergenic	novelGene_21338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	29882648	29882801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29882600_29882800
ES.25637.98	chr5	+	188	1	Intergenic	novelGene_21339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29888330	29888518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29888300_29888500
ES.25637.99	chr5	+	219	1	Intergenic	novelGene_21340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCAAGCACTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	29902750	29902969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29902800_29903000
ES.25638.1	chr5	+	181	1	Intergenic	novelGene_21342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATGCAGCATGG	NA	False	NA	NA	False	NA	NA	NA	29904029	29904210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29904000_29904200
ES.25639.1	chr5	+	156	1	Intergenic	novelGene_21343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATAAATAAATAAATCGA	NA	False	NA	NA	False	NA	NA	NA	29916184	29916340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_29916200_29916300
ES.2564.1	chr10	-	2795	11	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	12	junction_10	21.6185105869947	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTTTCTTGTCTATG	NA	False	NA	0	True	AATAAA	-21	NA	33827221	33795136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478
ES.2564.10	chr10	-	2237	12	NNC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	30.1971483520388	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTGGTTTTGGTTTC	NA	False	NA	-9	True	AATAAA	-12	NA	33827221	33795145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826690_33826862_33827198
ES.2564.11	chr10	-	813	5	NNC	ENSMUSG00000039531.9	novel	1872	9	NA	NA	3096	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	34.295590095521	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTGTTGGTTTTGG	3332	False	NA	-13	True	AATAAA	-8	NA	33806240	33795149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805853_33805983_33806151
ES.2564.12	chr10	-	5138	10	FSM	ENSMUSG00000039531.9	ENSMUST00000048222.6	2991	10	12	-2159	2	974	multi-exon	FALSE	canonical	3	35	junction_9	17.0301113137297	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAACAGGCTAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	33827206	33800155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.13	chr10	-	5020	10	NIC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	-8	175	intron_retention	FALSE	canonical	3	12	junction_9	22.7791327510265	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827239	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478
ES.2564.14	chr10	-	3623	1	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	4759	175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	4995	False	NA	NA	False	NA	NA	NA	33804577	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33801000_33804600
ES.2564.15	chr10	-	4095	11	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	2	175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.3901496774838	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827206	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803153_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.16	chr10	-	5148	3	NIC	ENSMUSG00000039531.9	novel	5512	7	NA	NA	2675	175	intron_retention	FALSE	canonical	3	83	junction_1	1.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	2911	False	NA	NA	False	NA	NA	NA	33806661	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33805983_33806151
ES.2564.17	chr10	-	4491	11	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	1	175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.6210373011386	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827254	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826685_33826862_33827198
ES.2564.18	chr10	-	4185	9	NIC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	0	175	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	27.6447892920167	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827221	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.19	chr10	-	4526	11	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	0	175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.6210373011386	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827221	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826689_33826862_33827126
ES.2564.2	chr10	-	2163	12	NIC	ENSMUSG00000039531.9	novel	2005	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.9005513782328	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827206	33795137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795367_33803494_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478_33826614_33827126
ES.2564.20	chr10	-	4487	11	NIC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	-1	175	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	29.3093841627558	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827219	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478_33826614_33827126
ES.2564.21	chr10	-	4026	8	NIC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	4	175	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	33.9651682324882	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827251	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33827198
ES.2564.22	chr10	-	4573	10	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	3	175	intron_retention	FALSE	canonical	0	0	junction_1	35.1750472724243	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827205	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803153_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478
ES.2564.23	chr10	-	4142	9	NIC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	5	175	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	32.7945784391262	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827250	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827198
ES.2564.24	chr10	-	4363	10	FSM	ENSMUSG00000039531.9	ENSMUST00000048222.6	2991	10	-12	-1360	1	175	multi-exon	FALSE	canonical	3	35	junction_9	17.0301113137297	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827230	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.25	chr10	-	4294	10	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	2	175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.6810146585522	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	NA	False	NA	NA	False	NA	NA	NA	33827206	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825788_33825861_33827126
ES.2564.26	chr10	-	5839	3	ISM	ENSMUSG00000039531.9	ENSMUST00000219457.2	5512	7	18368	-175	496	175	intron_retention	FALSE	canonical	3	80	junction_2	1.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGCAGAGGTCTATC	732	False	NA	NA	False	NA	NA	NA	33808840	33800954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_33803618_33804007_33804160_33805816
ES.2564.27	chr10	-	5549	2	NIC	ENSMUSG00000039531.9	novel	5512	7	NA	NA	1153	152	intron_retention	FALSE	canonical	3	80	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1389	False	NA	NA	False	NA	NA	NA	33808183	33800977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33804160_33805816
ES.2564.28	chr10	-	4527	12	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	0	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.3927156456634	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33827221	33800978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33811982_33812045_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478_33826614_33827126
ES.2564.29	chr10	-	4215	9	NNC	ENSMUSG00000039531.9	novel	2991	10	NA	NA	2	150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.205300361642	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33827206	33800979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33826674_33826862_33827126
ES.2564.3	chr10	-	5550	1	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	8649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	8885	False	NA	-1	True	AATAAA	-20	NA	33800687	33795137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795100_33800700
ES.2564.4	chr10	-	2129	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	51	0	4	0	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827204	33795137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.5	chr10	-	1977	10	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	26.0687599803593	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827221	33795137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.6	chr10	-	2306	12	NNC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.1971483520388	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGGTTTCTTGTCTA	NA	False	NA	-2	True	AATAAA	-19	NA	33827206	33795138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826685_33826862_33827126
ES.2564.7	chr10	-	6863	10	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	35	junction_9	17.0561889133216	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGGTTTCTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	33827196	33795139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ES.2564.8	chr10	-	2273	12	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	27.9766726912982	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTTTTGGTTTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	33827217	33795141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478_33826614_33827126
ES.2564.9	chr10	-	2616	10	NIC	ENSMUSG00000039531.9	novel	2180	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_5	29.6273147243853	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGTTTTGGTTTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	33827218	33795143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33826478
ES.25640.1	chr5	+	3898	6	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	15	1	intron_retention	FALSE	canonical	3	80	junction_5	773.776608589327	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTATTTGGTCAGAT	4309	False	NA	14	True	AATAAA	-22	NA	29940700	29962968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29961337_29962545
ES.25640.10	chr5	+	4227	8	NIC	ENSMUSG00000029131.15	novel	1605	8	NA	NA	-8	-23	intron_retention	FALSE	canonical	0	0	junction_5	698.239564759774	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCATGAGTGGGGTC	4587	False	NA	19	True	AATAAA	-19	NA	29940978	29972078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29961337_29969396_29969529_29970503_29970646_29971322
ES.25640.11	chr5	+	4826	5	ISM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	-13	1	-7	-1	intron_retention	FALSE	canonical	3	1920	junction_3	63.3378836084693	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4588	False	NA	12	True	AATAAA	-20	NA	29940979	29962966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539
ES.25640.12	chr5	+	1975	7	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	922.086522814186	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4588	False	NA	12	True	AATAAA	-20	NA	29940979	29962966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29959590_29961231_29961337_29962545
ES.25640.13	chr5	+	2523	10	NNC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	-4	-104	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	737.333149152746	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGCTCTCTTGTGGTC	4591	False	NA	3	True	AATAAA	-16	NA	29940982	29991372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29941121_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ES.25640.14	chr5	+	1429	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	297	4772	-4	-1	5prime_fragment	FALSE	canonical	3	694	junction_8	427.836252992894	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTATGGAGTATAT	4591	False	NA	NA	False	ATTAAA	-18	NA	29940982	29986704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ES.25640.15	chr5	+	3740	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	298	2460	-3	-1622	5prime_fragment	FALSE	canonical	3	694	junction_8	427.836252992894	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTCTGTGGCCTTAAAG	4592	False	NA	NA	False	TTTAAA	-13	NA	29940983	29989016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ES.25640.17	chr5	+	2489	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	46	-930	-3	930	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGGGTCTGCAGCCT	4592	False	NA	NA	False	AATAAA	-27	NA	29940983	29973031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.19	chr5	+	1032	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	-9	1	-3	-1	multi-exon	FALSE	canonical	3	30	junction_5	922.805580222015	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4592	False	NA	12	True	AATAAA	-20	NA	29940983	29962966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ES.25640.2	chr5	+	2858	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	61	-1	61	1	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTGTGTATGTGCA	4355	False	NA	34	True	AATAAA	-45	NA	29940746	29991477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ES.25640.20	chr5	+	1324	7	NNC	ENSMUSG00000029131.15	novel	1605	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	741.307047645501	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	4592	False	NA	42	True	AATAAA	-42	NA	29940983	29972101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958618_29970573_29970646_29971322
ES.25640.21	chr5	+	3180	6	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	33	junction_5	792.527349685801	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4592	False	NA	12	True	AATAAA	-20	NA	29940983	29962966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29959590_29961231
ES.25640.22	chr5	+	3746	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	46	-2187	-3	2187	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTAGCCTCTTGTTT	4592	False	NA	NA	False	NA	NA	NA	29940983	29974288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.24	chr5	+	6105	8	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	27	junction_1	727.779765969831	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTGTGTATGTGCA	4597	False	NA	34	True	AATAAA	-45	NA	29940988	29991477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ES.25640.25	chr5	+	3855	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	304	2339	-3	-1501	5prime_fragment	FALSE	canonical	3	694	junction_8	427.836252992894	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAGAAGAGTCATGAA	4598	False	NA	NA	False	ATTAAA	-13	NA	29940989	29989137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ES.25640.26	chr5	+	2501	9	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	-2	-21	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	736.838591127663	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACAGTTTTATACATT	4599	False	NA	12	True	AATAAA	-23	NA	29940990	29991455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ES.25640.27	chr5	+	1035	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	53	517	-2	-101	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGATTTTTGAGTTTGT	4599	False	NA	NA	False	TATAAA	-23	NA	29940990	29971584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.3	chr5	+	1662	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	-57	0	-57	0	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	4489	False	NA	42	True	AATAAA	-42	NA	29940880	29972101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.30	chr5	+	4021	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	55	-2471	0	2471	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGGATTCTCCCAAGT	4601	False	NA	NA	False	ATTAAA	-28	NA	29940992	29974572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.31	chr5	+	2268	9	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	1	-21	combination_of_known_splicesites	FALSE	canonical	1	10	junction_8	650.499219350031	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACAGTTTTATACATT	4602	False	NA	12	True	AATAAA	-23	NA	29940993	29991455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29990028
ES.25640.37	chr5	+	1419	7	NIC	ENSMUSG00000029131.15	novel	1605	8	NA	NA	-1	-12	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	707.616755187596	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTGCAGCCTTCT	4629	False	NA	30	True	AATAAA	-30	NA	29941020	29972089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.39	chr5	+	2718	11	NNC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	838.98626925594	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGTTTTATACATTT	4629	False	NA	13	True	AATAAA	-24	NA	29941020	29991456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29959434_29959590_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ES.25640.4	chr5	+	2536	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	282	100	-19	-100	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTCTTGTGGTCATTC	4576	False	NA	7	True	AATAAA	-20	NA	29940967	29991376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ES.25640.40	chr5	+	1216	5	ISM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	16456	12	1674	-12	3prime_fragment	FALSE	canonical	3	1788	junction_2	94.5039681706541	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTGCAGCCTTCT	NA	False	NA	30	True	AATAAA	-30	NA	29957393	29972089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ES.25640.41	chr5	+	4915	3	ISM	ENSMUSG00000029131.15	ENSMUST00000140376.2	847	4	-3953	14619	-3659	-15	5prime_fragment	FALSE	canonical	3	1856	junction_2	80	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGGGTCTGCAGCCT	NA	False	NA	27	True	AATAAA	-27	NA	29965519	29972086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29969529_29970503_29970646_29971322
ES.25640.42	chr5	+	4049	3	ISM	ENSMUSG00000029131.15	ENSMUST00000140376.2	847	4	-3608	15140	-3314	-120	5prime_fragment	FALSE	canonical	3	1856	junction_2	80	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGGAGCCTCCATCT	NA	False	NA	NA	False	TATAAA	-4	NA	29965864	29971565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29969529_29970503_29970646_29971322
ES.25640.43	chr5	+	4514	2	FSM	ENSMUSG00000029131.15	ENSMUST00000139126.2	821	2	-3277	-416	-2268	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	NA	False	NA	42	True	AATAAA	-42	NA	29966910	29972101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_29970646_29971322
ES.25640.44	chr5	+	766	1	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	1133	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	771	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGGGTCTGCAGCCT	NA	False	NA	27	True	AATAAA	-27	NA	29971320	29972086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29971300_29972100
ES.25640.45	chr5	+	9373	3	Genic_Genomic	ENSMUSG00000029131.15	novel	2918	10	NA	NA	5777	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	0	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATGTGTATGGAGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	29975964	29986702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_29976480_29977663_29984704_29984884
ES.25640.46	chr5	+	3034	3	NNC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	14474	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	309	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGTTTTATACATTT	NA	False	NA	13	True	AATAAA	-24	NA	29984661	29991456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29984704_29984884_29986449_29990028
ES.25640.47	chr5	+	4230	1	Genic_Genomic	ENSMUSG00000029131.15	novel	NA	NA	NA	NA	19552	2493	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTTTGCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	29989739	29993969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_29989700_29994000
ES.25640.5	chr5	+	940	6	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	803.699097921604	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCATGTTGTATTTGGT	4576	False	NA	9	True	AATAAA	-17	NA	29940967	29962963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29962545
ES.25640.6	chr5	+	2075	8	NNC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	981.254112171287	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTGTATTTGGTCAG	4576	False	NA	12	True	AATAAA	-20	NA	29940967	29962966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29959590_29959774_29959863_29961231_29961337_29962545
ES.25640.9	chr5	+	6192	9	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	286	20	-15	-20	intron_retention	FALSE	canonical	3	694	junction_8	427.836252992894	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAGTTTTATACATTT	4580	False	NA	13	True	AATAAA	-24	NA	29940971	29991456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127
ES.25641.1	chr5	-	175	1	Intergenic	novelGene_21335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	29781209	29781034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29781000_29781200
ES.25642.1	chr5	-	5532	1	Antisense	novelGene_ENSMUSG00000039000.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29799968	29794436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_29794400_29800000
ES.25643.1	chr5	-	3250	2	Intergenic	novelGene_21336	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAACAGTGTACTTATA	NA	False	NA	NA	False	NA	NA	NA	29968296	29847677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29847797_29965165
ES.25643.2	chr5	-	233	1	Intergenic	novelGene_21344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCCACACCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	29918464	29918231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29918200_29918500
ES.25643.3	chr5	-	176	2	Intergenic	novelGene_21345	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29933704	29918287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29918305_29933545
ES.25643.4	chr5	-	158	1	Intergenic	novelGene_21346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATCAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29922558	29922400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29922400_29922600
ES.25643.5	chr5	-	237	1	Intergenic	novelGene_21347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGGGTGTGAGCATA	NA	False	NA	NA	False	NA	NA	NA	29933705	29933468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_29933500_29933700
ES.25643.6	chr5	-	2311	2	Antisense	novelGene_ENSMUSG00000029131.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	TTTAAA	-23	NA	29945523	29941856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_29942509_29943864
ES.25643.7	chr5	-	6036	1	Antisense	novelGene_ENSMUSG00000029131.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTCTCTAAAAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	29965724	29959688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_29959700_29965700
ES.25643.8	chr5	-	4188	1	Antisense	novelGene_ENSMUSG00000029131.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	AAAACA	-23	NA	29965724	29961536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_29961500_29965700
ES.25644.1	chr5	-	176	1	Intergenic	novelGene_21348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAACAAAAAAAAACAA	8059	False	NA	NA	False	NA	NA	NA	30000781	30000605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30000600_30000800
ES.25645.1	chr5	+	173	1	Intergenic	novelGene_21349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAACTTAGAACGTT	NA	False	NA	NA	False	NA	NA	NA	30011099	30011272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30011100_30011300
ES.25646.1	chr5	+	159	1	Intergenic	novelGene_21350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	3570	False	NA	NA	False	NA	NA	NA	30147807	30147966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30147800_30148000
ES.25647.1	chr5	-	2588	1	Intergenic	novelGene_21351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAAATGAAT	NA	False	NA	NA	False	AAAACA	-33	NA	30234471	30231883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30231900_30234500
ES.25648.1	chr5	+	3162	1	Antisense	novelGene_ENSMUSG00000025747.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCCACAGTCTAAGCAG	NA	False	NA	NA	False	NA	NA	NA	30274230	30277392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_30274200_30277400
ES.25649.1	chr5	-	2461	8	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-8	19655	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	642.724970539578	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACGAATGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	30278623	30243544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30245047_30266036_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.10	chr5	-	3877	8	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	27	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	816.008178230326	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278594	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276224_30276308_30276631_30276706_30278358
ES.25649.11	chr5	-	5605	7	FSM	ENSMUSG00000025747.13	ENSMUST00000154751.6	2723	7	7	-2889	7	27	multi-exon	FALSE	canonical	3	21	junction_5	685.356030752549	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278605	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30276706_30278358
ES.25649.12	chr5	-	3833	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-18	-652	-18	27	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278633	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.13	chr5	-	3915	8	NNC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-7	27	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	880.680326074503	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278622	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276224_30276308_30276631_30276706_30278358
ES.25649.14	chr5	-	4411	3	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	9002	-652	8907	27	intron_retention	FALSE	canonical	3	1628	junction_1	133	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30269613	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_30266132_30266965_30267038_30268233
ES.25649.15	chr5	-	3284	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-2	-119	-2	119	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGATTCCGAGATCTGGA	NA	False	NA	NA	False	NA	NA	NA	30278617	30263705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.16	chr5	-	3171	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-2	-6	-2	6	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAGACTGCTACTTATA	NA	False	NA	NA	False	NA	NA	NA	30278617	30263818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.17	chr5	-	2602	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-16	577	-16	-577	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTCTATCTCATTCTT	NA	False	NA	4	True	NA	NA	NA	30278631	30264401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.18	chr5	-	4357	7	FSM	ENSMUSG00000025747.13	ENSMUST00000154751.6	2723	7	19	-1653	-9	-584	multi-exon	FALSE	canonical	3	21	junction_5	685.356030752549	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGAGCTATTCTATCT	NA	False	NA	-3	True	NA	NA	NA	30278593	30264408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30276706_30278358
ES.25649.19	chr5	-	2455	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	-585	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	669.869058514838	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGAGCTATTCTATC	NA	False	NA	-4	True	NA	NA	NA	30278594	30264409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273537_30276631_30276706_30278358
ES.25649.2	chr5	-	2510	9	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-6	19653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	800.505299404695	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCACGAATGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	30278621	30243546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30245047_30254135_30254189_30266036_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.20	chr5	-	2422	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-7	748	-7	-748	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTATAGTTCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	30278622	30264572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.21	chr5	-	2558	8	FSM	ENSMUSG00000025747.13	ENSMUST00000141630.8	3884	8	-52	1378	-16	-753	multi-exon	FALSE	canonical	3	21	junction_5	887.115366493777	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGCTCTATAGTTCT	NA	False	NA	NA	False	NA	NA	NA	30278631	30264577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30274954_30276631_30276706_30278358
ES.25649.22	chr5	-	1194	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-16	1985	-16	252	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCCTCTCTTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	30278631	30265809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.23	chr5	-	1129	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-6	252	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCCTCTCTTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	30278556	30265809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.24	chr5	-	1083	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-7	252	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	669.869058514838	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCCTCTCTTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	30278622	30265809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273537_30276631_30276706_30278358
ES.25649.25	chr5	-	1076	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	-38	2125	-38	112	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGTATTTTCCTCATT	NA	False	NA	23	True	NA	NA	NA	30278653	30265949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.26	chr5	-	1009	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-7	66	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278622	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.27	chr5	-	1957	7	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	1	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	687.513818042954	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278611	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267696_30267922_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.28	chr5	-	853	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	1	66	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	669.869058514838	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278578	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273537_30276631_30276706_30278358
ES.25649.29	chr5	-	1054	8	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	66	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	816.008178230326	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278594	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276224_30276308_30276631_30276706_30278358
ES.25649.3	chr5	-	3747	8	NNC	ENSMUSG00000025747.13	novel	2723	7	NA	NA	2	19061	intron_retention	FALSE	canonical	0	0	junction_1	831.944537986586	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATTATTTAAAAGCCT	NA	False	NA	NA	False	AATAAA	-17	NA	30278610	30244138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30245047_30265943_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30276706_30278358
ES.25649.30	chr5	-	2478	8	NNC	ENSMUSG00000025747.13	novel	2723	7	NA	NA	-10	66	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	813.242715482724	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278625	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30276308_30276631_30276706_30278358
ES.25649.31	chr5	-	965	7	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	689.256221509018	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278594	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278364
ES.25649.32	chr5	-	2781	7	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-10	66	intron_retention	FALSE	canonical	3	21	junction_5	843.372528733431	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278594	30265995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30276706_30278358
ES.25649.33	chr5	-	922	7	NNC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-1	65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	687.513818042954	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGCTTTCAGTGATGC	NA	False	NA	-24	True	ATTAAA	-16	NA	30278616	30265996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267048_30268313_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ES.25649.34	chr5	-	4425	6	ISM	ENSMUSG00000025747.13	ENSMUST00000154751.6	2723	7	16	-65	-12	65	intron_retention	FALSE	canonical	3	21	junction_5	732.466135735981	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTGCTTTCAGTGATGC	NA	False	NA	-24	True	ATTAAA	-16	NA	30278596	30265996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831
ES.25649.35	chr5	-	5599	5	NNC	ENSMUSG00000025747.13	novel	2723	7	NA	NA	-10	59	intron_retention	FALSE	non_canonical	0	0	junction_2	790.79074349666	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTAGAGTGCTTTCAG	NA	False	NA	-30	True	ATTAAA	-10	NA	30278594	30266002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267696_30267922_30269185_30273463_30276706_30278358
ES.25649.36	chr5	-	214	1	Intergenic	novelGene_21354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTAAGTGCTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	30267918	30267704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30267700_30267900
ES.25649.37	chr5	-	2091	2	ISM	ENSMUSG00000025747.13	ENSMUST00000138520.2	663	4	-111	1999	-16	-1999	5prime_fragment	FALSE	canonical	3	1874	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAAGGAAAGTCAGTTA	NA	False	NA	NA	False	AAAAAG	-16	NA	30278631	30274887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_30276706_30278358
ES.25649.38	chr5	-	3679	1	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	-2027	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30278594	30274915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30274900_30278600
ES.25649.4	chr5	-	176	1	Intergenic	novelGene_21352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGATTAGGA	NA	False	NA	NA	False	NA	NA	NA	30246191	30246015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30246000_30246200
ES.25649.5	chr5	-	8839	1	Intergenic	novelGene_21353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTTCTGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	30259868	30251029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30251000_30259900
ES.25649.6	chr5	-	4246	9	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-1	12170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	880.687621975011	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTTCTGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	30278575	30251029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30254189_30265943_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276224_30276308_30276631_30276706_30278358
ES.25649.7	chr5	-	3953	8	NIC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	-16	27	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	824.746516407636	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278631	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30274831_30274954_30276631_30276706_30278358
ES.25649.8	chr5	-	5819	8	NNC	ENSMUSG00000025747.13	novel	3884	8	NA	NA	1	27	intron_retention	FALSE	non_canonical	0	0	junction_1	924.412996314473	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278611	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30267696_30267922_30268410_30269082_30269185_30273463_30273639_30274831_30274954_30276224_30276308_30276631_30276706_30278358
ES.25649.9	chr5	-	7756	6	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	-10	27	intron_retention	TRUE	non_canonical	0	0	junction_2	738.507792782175	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGACCGAGCCCTTTCCC	NA	False	NA	NA	False	NA	NA	NA	30278594	30263172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30266132_30266965_30267696_30267922_30268410_30269082_30269185_30273463_30276706_30278358
ES.2565.1	chr10	+	157	1	Intergenic	novelGene_1946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	33833391	33833548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_33833400_33833500
ES.25650.1	chr5	+	179	1	Intergenic	novelGene_21355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTCAGCGGAAT	NA	False	NA	NA	False	NA	NA	NA	30293858	30294037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30293900_30294000
ES.25651.1	chr5	+	2279	2	FSM	ENSMUSG00000104667.2	ENSMUST00000197982.2	2249	2	-30	0	-30	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGCTCTGGAGCACCA	NA	False	NA	NA	False	AATAAA	-14	NA	30297907	30302684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30298047_30300544
ES.25652.1	chr5	+	3817	6	FSM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	47	1	47	-1	multi-exon	FALSE	canonical	1	1	junction_1	1.83303027798234	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCCTGGGTGTTGGCTG	NA	False	NA	NA	False	AATAAA	-28	NA	30310205	30323375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30310402_30313249_30313391_30318281_30318413_30318923_30319986_30320884_30321055_30321258
ES.25652.2	chr5	+	3512	5	NNC	ENSMUSG00000044576.7	novel	3865	6	NA	NA	6261	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.27760839478607	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGGTGTTGGCTGATT	NA	False	NA	NA	False	AATAAA	-31	NA	30316419	30323378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30316449_30318281_30318413_30318923_30319986_30320884_30321055_30321258
ES.25652.3	chr5	+	2371	3	ISM	ENSMUSG00000044576.7	ENSMUST00000058045.5	3865	6	9537	207	9537	-207	3prime_fragment	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGTGTCAGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	30319695	30323169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30319986_30320884_30321055_30321258
ES.25653.1	chr5	-	204	1	Intergenic	novelGene_21356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	30320567	30320363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30320400_30320600
ES.25654.1	chr5	+	178	1	Intergenic	novelGene_21357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGATGGCTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	30339457	30339635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30339500_30339600
ES.25655.1	chr5	+	2469	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	-33	-403	-33	403	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACTGTGCTACACAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	30360212	30389994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.11	chr5	+	1932	15	NIC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	147.714855622001	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGTTCGTAGTCTCGT	NA	False	NA	1	True	AATAAA	-16	NA	30360289	30389582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.15	chr5	+	4472	16	NNC	ENSMUSG00000059447.14	novel	2048	16	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.073342667754	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTGTTCGTAGTCTCG	NA	False	NA	0	True	AATAAA	-15	NA	30360309	30389581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30387018_30387514
ES.25655.17	chr5	+	7547	13	NIC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	10	0	intron_retention	FALSE	canonical	3	438	junction_6	51.407414078343	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTGTTCGTAGTCTC	NA	False	NA	-1	True	AATAAA	-14	NA	30360310	30389580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30382008_30383637_30383718_30383794_30384638_30385312_30385388_30385918
ES.25655.19	chr5	+	1932	15	ISM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	8395	0	8364	0	3prime_fragment	FALSE	canonical	3	438	junction_5	56.083438204307	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTGTTCGTAGTCTC	NA	False	NA	-1	True	AATAAA	-14	NA	30368664	30389580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.2	chr5	+	2028	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	-1	6	-1	-2	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCGTAGTCTCGTTAT	NA	False	NA	4	True	AATAAA	-19	NA	30360244	30389585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.20	chr5	+	196	1	ISM	ENSMUSG00000059447.14	ENSMUST00000127364.2	4388	3	12335	468	-7348	-468	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACAGGCAGTCACTAAC	NA	False	NA	NA	False	NA	NA	NA	30372607	30372803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30372600_30372800
ES.25655.21	chr5	+	4724	7	ISM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	19052	-1	-634	1	intron_retention	FALSE	canonical	3	516	junction_2	27.232027712481	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTGTTCGTAGTCTCG	NA	False	NA	0	True	AATAAA	-15	NA	30379321	30389581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918
ES.25655.22	chr5	+	4522	7	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	989	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	211.355677052267	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30380944	30389583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30387018_30387514
ES.25655.23	chr5	+	2211	5	NIC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	-1070	-1	intron_retention	FALSE	canonical	3	549	junction_2	38.2524509018703	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGACTGTTCGTAGTCT	NA	False	NA	-2	True	AATAAA	-13	NA	30382488	30389579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.3	chr5	+	4495	16	NNC	ENSMUSG00000059447.14	novel	2033	16	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	141.794154400745	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTCGTAGTCTCGTT	NA	False	NA	2	True	AATAAA	-17	NA	30360245	30389583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30387018_30387514
ES.25655.4	chr5	+	4989	15	ISM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	6	5	-4	-1	intron_retention	FALSE	canonical	3	438	junction_6	53.1993267565196	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCGTAGTCTCGTTATT	NA	False	NA	5	True	AATAAA	-20	NA	30360251	30389586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918
ES.25655.5	chr5	+	6640	11	NIC	ENSMUSG00000059447.14	novel	2048	16	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_1	169.443914024671	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGACTGTTCGTAGTCT	NA	False	NA	-2	True	AATAAA	-13	NA	30360253	30389579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30360381_30368666_30368742_30369023_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30386084_30389050
ES.25655.7	chr5	+	1651	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	24	358	0	-1	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCAGTGTTCGAGGTT	NA	False	NA	NA	False	NA	NA	NA	30360269	30389233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25655.9	chr5	+	2035	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	11	2	8	-2	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCGTAGTCTCGTTAT	NA	False	NA	4	True	AATAAA	-19	NA	30360280	30389585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ES.25656.11	chr5	-	1170	3	NIC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	-1324	-2	intron_retention	FALSE	canonical	3	432	junction_2	10.5	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGACTGGCCTGTTTTCTT	NA	False	NA	-5	True	AATAAA	-21	NA	30326627	30324425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30325189_30325685_30325801_30326335
ES.25656.12	chr5	-	6614	18	NNC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_14	141.310475616747	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGACTGGCCTGTTTTCT	NA	False	NA	-6	True	AATAAA	-20	NA	30359963	30324426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30328693_30331562_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30351799_30351924_30352343_30352415_30352977_30353020_30359879
ES.25656.15	chr5	-	10601	18	NIC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	0	-4	intron_retention	FALSE	canonical	3	340	junction_10	40.0118494559526	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGGCCTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	30359960	30324427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ES.25656.16	chr5	-	9297	16	NIC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	3	-4	intron_retention	FALSE	canonical	3	340	junction_8	44.287946692325	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGGCCTGTTTTC	NA	False	NA	-7	True	AATAAA	-19	NA	30359985	30324427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30333933_30334818_30334929_30337237_30337295_30339055_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ES.25656.18	chr5	-	1261	1	FSM	ENSMUSG00000025745.13	ENSMUST00000196156.2	1069	1	-161	-31	11	31	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGTGGACTGG	NA	False	NA	NA	False	NA	NA	NA	30360149	30358888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30358900_30360100
ES.25656.2	chr5	-	3178	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	-281	1120	-281	2	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCTGTTTTCTTCTGT	NA	False	NA	-1	True	AATAAA	-25	NA	30360441	30324421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ES.25656.3	chr5	-	2180	15	NNC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	-1770	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	116.699618767193	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCTGTTTTCTTCTGT	7456	False	NA	-1	True	AATAAA	-25	NA	30347795	30324421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337286_30339055_30339175_30339976_30340100_30345946_30346050_30347716
ES.25656.4	chr5	-	2535	19	NNC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.538053761205	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCTGTTTTCTTCTGT	NA	False	NA	-1	True	AATAAA	-25	NA	30359959	30324421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30324974_30325715_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ES.25656.9	chr5	-	4759	19	NIC	ENSMUSG00000025745.13	novel	4017	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	340	junction_10	41.1221081387832	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	30359962	30324424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ES.25657.1	chr5	-	1368	1	Intergenic	novelGene_21358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAAACACTGTAAGTG	NA	False	NA	NA	False	NA	NA	NA	30391077	30389709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30389700_30391100
ES.25658.1	chr5	-	261	1	Intergenic	novelGene_21359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAAAAAGTAAGCG	NA	False	NA	NA	False	NA	NA	NA	30396702	30396441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30396400_30396700
ES.25659.1	chr5	-	2746	3	NIC	ENSMUSG00000067642.12	novel	3099	14	NA	NA	-1995	-5	intron_retention	FALSE	canonical	2	4	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACAACAAAAGAGGTC	4675	False	NA	NA	False	AATAAA	-11	NA	30403411	30398437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_30398560_30400040_30402614_30403360
ES.25659.2	chr5	-	3497	2	ISM	ENSMUSG00000067642.12	ENSMUST00000125367.4	426	4	-1999	5	-1999	-5	intron_retention	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACAACAAAAGAGGTC	4671	False	NA	NA	False	AATAAA	-11	NA	30403415	30398437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_30398560_30400040
ES.2566.1	chr10	-	9694	10	Fusion	ENSMUSG00000112280.2_ENSMUSG00000019782.11	novel	1090	7	NA	NA	-2	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	626.053738868012	225	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAATTGAGATATATCT	NA	False	NA	NA	False	AATAAA	-12	NA	33895584	33863212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_33864822_33865271_33869046_33869257_33870437_33870472_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ES.2566.11	chr10	-	962	7	NNC	ENSMUSG00000019782.11	novel	1090	7	NA	NA	76	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	497.847617248491	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATAAAGTGTTTACT	NA	False	NA	-31	True	AATAAA	-15	NA	33895506	33872558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878558_33884988_33885120_33888067_33888134_33895361
ES.2566.2	chr10	-	3389	1	FSM	ENSMUSG00000112280.2	ENSMUST00000218182.2	7840	1	4450	1	-1310	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAATTGAGATATATCT	NA	False	NA	NA	False	AATAAA	-12	NA	33866601	33863212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33863200_33866600
ES.2566.3	chr10	-	1104	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	-14	0	-14	0	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTACTTCCTCTTA	NA	False	NA	-23	True	AATAAA	-23	NA	33895634	33872550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ES.2566.5	chr10	-	1022	7	NNC	ENSMUSG00000019782.11	novel	1090	7	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	504.035272134357	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGTGTTTACTTC	NA	False	NA	-29	True	AATAAA	-17	NA	33895566	33872556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33872845_33877132_33877188_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ES.2566.6	chr10	-	1140	8	NNC	ENSMUSG00000019782.11	novel	1090	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	591.85753939506	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGTGTTTACTTC	NA	False	NA	-29	True	AATAAA	-17	NA	33895595	33872556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33891971_33892053_33895361
ES.2566.7	chr10	-	927	7	NNC	ENSMUSG00000019782.11	novel	1090	7	NA	NA	113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	497.456754122629	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGTGTTTACTTC	NA	False	NA	-29	True	AATAAA	-17	NA	33895469	33872556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33872845_33877138_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ES.2566.9	chr10	-	1020	8	NNC	ENSMUSG00000019782.11	novel	1090	7	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	608.585915320533	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGTGTTTACTTC	NA	False	NA	-29	True	AATAAA	-17	NA	33895512	33872556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33872845_33877132_33877196_33877653_33877787_33878285_33878330_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ES.25660.1	chr5	-	176	1	Intergenic	novelGene_21360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30415065	30414889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30414900_30415100
ES.25661.1	chr5	-	4537	1	Intergenic	novelGene_21361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	30432632	30428095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30428100_30432600
ES.25662.1	chr5	-	3121	1	Intergenic	novelGene_21362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGGAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	30437381	30434260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30434300_30437400
ES.25663.1	chr5	+	3352	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	-2	3453	-2	1	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTTGTCACTGTTGAA	NA	False	NA	4	True	AGTAAA	-15	NA	30437576	30473972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.10	chr5	+	2918	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	86	3799	-7	-345	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGGTTGTGTGAGGATAA	NA	False	NA	NA	False	AATAAA	-26	NA	30437664	30473626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.13	chr5	+	6631	10	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	19.440952067323	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTGTTTTCAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	30437689	30477423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462760_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.14	chr5	+	3197	10	NNC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.7190138235369	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437724	30473971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471904
ES.25663.15	chr5	+	4753	1	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	12999	-651	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTGCTTTGGGATTA	NA	False	NA	NA	False	NA	NA	NA	30450670	30455423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30450700_30455400
ES.25663.2	chr5	+	6687	9	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	20.8851023459307	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTTTTCAAGTTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	30437586	30477426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30437814_30452460_30452530_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.3	chr5	+	6794	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	14	-5	14	5	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAAGTTGTCTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	30437592	30477430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.4	chr5	+	8008	8	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	18	-2	intron_retention	FALSE	canonical	3	44	junction_3	11.5687827663016	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTCCTGAGTCCATGGC	NA	False	NA	NA	False	ATTAAA	-16	NA	30437596	30472243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30469454_30470335_30470522_30471898
ES.25663.5	chr5	+	2685	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	25	4093	25	-639	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAATGGAACCATTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	30437603	30473332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.6	chr5	+	3115	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	25	3663	25	-209	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATTTGGACCACAGG	NA	False	NA	NA	False	TATAAA	-29	NA	30437603	30473762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.7	chr5	+	3155	11	NNC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.7147001044633	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437615	30473971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898_30472676_30472832
ES.25663.8	chr5	+	3250	10	NIC	ENSMUSG00000075703.17	novel	6803	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	19.440952067323	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437618	30473971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462760_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25663.9	chr5	+	1550	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	71	5182	2	-2	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTCCTGAGTCCATGGC	NA	False	NA	NA	False	ATTAAA	-16	NA	30437649	30472243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ES.25664.1	chr5	-	4035	1	Intergenic	novelGene_21363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAGAGGAGGGAGC	7026	False	NA	NA	False	AATAAA	-11	NA	30618460	30614425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30614400_30618500
ES.25665.1	chr5	+	3431	2	NNC	ENSMUSG00000029182.11	novel	660	2	NA	NA	-10	-11346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAAACCAAAA	121	False	NA	NA	False	NA	NA	NA	30623417	30626904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30624560_30624615
ES.25666.1	chr5	-	160	1	Intergenic	novelGene_21364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	30663722	30663562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30663600_30663700
ES.25667.1	chr5	-	4581	3	NNC	ENSMUSG00000053214.8	novel	4823	4	NA	NA	-23560	0	intron_retention	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	30769523	30731330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30735725_30736791_30736895_30769439
ES.25667.2	chr5	-	4688	4	NNC	ENSMUSG00000053214.8	novel	4823	4	NA	NA	-23543	-2	intron_retention	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	30769506	30731332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30735725_30736791_30736895_30751326_30751418_30769404
ES.25667.3	chr5	-	4886	6	NNC	ENSMUSG00000053214.8	novel	4823	4	NA	NA	-26947	-4	intron_retention	FALSE	canonical	0	0	junction_2	0.4	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCCTCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	30772910	30731334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_30735725_30736791_30736895_30740207_30740285_30751326_30751418_30772373_30772490_30772801
ES.25668.1	chr5	+	2006	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	-20	1102	-20	383	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGACTTCCTTGATGT	6658	False	NA	20	True	NA	NA	NA	30805256	30815971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.10	chr5	+	2581	7	NNC	ENSMUSG00000029175.18	novel	1972	7	NA	NA	3179	370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4709162899692	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTCCTTGATGTTTTG	9936	False	NA	7	True	NA	NA	NA	30808534	30815958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30809164_30810107_30810253_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.2	chr5	+	3032	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	8	48	0	-48	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTTGGAATTTATTT	6686	False	NA	6	True	AATAAA	-17	NA	30805284	30817025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.3	chr5	+	2040	7	NNC	ENSMUSG00000029175.18	novel	1972	7	NA	NA	3	373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.3248400751392	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTGATGTTTTGACT	6689	False	NA	10	True	NA	NA	NA	30805287	30815961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30805443_30807074_30807150_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.4	chr5	+	2024	7	NNC	ENSMUSG00000029175.18	novel	1972	7	NA	NA	-4	370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.6425251572029	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTCCTTGATGTTTTG	6694	False	NA	7	True	NA	NA	NA	30805292	30815958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30805443_30807074_30807150_30812091_30812165_30812838_30813003_30813231_30813445_30814090_30814202_30814720
ES.25668.5	chr5	+	3988	8	NNC	ENSMUSG00000029175.18	novel	1972	7	NA	NA	-4	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.677277085661	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGTTGTTTTGGAATT	6694	False	NA	1	True	AATAAA	-12	NA	30805292	30817020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30805443_30808411_30809164_30810107_30810325_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.6	chr5	+	3693	5	NIC	ENSMUSG00000029175.18	novel	3088	6	NA	NA	-3	-52	intron_retention	FALSE	canonical	3	97	junction_3	8.31790237980706	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTGTTTTGGAATTT	6695	False	NA	2	True	AATAAA	-13	NA	30805293	30817021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30805443_30812091_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.7	chr5	+	2832	4	NIC	ENSMUSG00000029175.18	novel	1299	5	NA	NA	-4	364	intron_retention	FALSE	canonical	3	97	junction_2	7.87400787401181	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCCAACACCTCCTTGAT	6708	False	NA	1	True	NA	NA	NA	30805306	30815952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30805443_30812091_30813445_30814090_30814202_30814720
ES.25668.8	chr5	+	3073	7	NNC	ENSMUSG00000029175.18	novel	1972	7	NA	NA	3	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.3248400751392	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGTTGTTTTGGAATT	6715	False	NA	1	True	AATAAA	-12	NA	30805313	30817020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30805443_30807074_30807150_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25668.9	chr5	+	6762	5	ISM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	1872	1103	1793	382	3prime_fragment	FALSE	canonical	3	97	junction_3	9.41740410091868	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGACTTCCTTGATG	8550	False	NA	19	True	NA	NA	NA	30807148	30815970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ES.25669.1	chr5	+	964	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	80	422	-40	-1	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9146	False	NA	39	True	AATAAA	-23	NA	30824200	30831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.10	chr5	+	6118	5	NNC	ENSMUSG00000029177.10	novel	827	5	NA	NA	-8	4	intron_retention	FALSE	non_canonical	0	0	junction_1	871.221089907723	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCGCTTGAATCTGTTG	9178	False	NA	13	True	AATATA	-18	NA	30824232	30831726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30829915_30830325_30830404_30830610_30830788_30831381
ES.25669.11	chr5	+	3482	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	730.376505646232	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGTGGCAGTCCCGCCA	9178	False	NA	38	True	AATAAA	-22	NA	30824232	30831751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.12	chr5	+	7233	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-8	6911	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_5	664.246761377125	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGATGTATATTTCA	9178	False	NA	NA	False	AATAAA	-19	NA	30824232	30839085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381_30831838_30832869
ES.25669.13	chr5	+	1325	5	FSM	ENSMUSG00000029177.10	ENSMUST00000199617.2	827	5	-102	-396	-1	-48	multi-exon	FALSE	canonical	3	33	junction_3	705.72033235553	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAATAAATAA	9185	False	NA	NA	False	NA	NA	NA	30824239	30832126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830610_30830788_30831381
ES.25669.14	chr5	+	3149	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	0	2978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	665.401953709185	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCCATTTTCTTAGTT	9186	False	NA	NA	False	NA	NA	NA	30824240	30835152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381_30832926_30834100
ES.25669.15	chr5	+	1157	4	FSM	ENSMUSG00000029177.10	ENSMUST00000150810.8	1120	4	-38	1	0	-1	multi-exon	FALSE	canonical	3	1270	junction_1	232.020592955788	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9186	False	NA	39	True	AATAAA	-23	NA	30824240	30831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30829807_30829915_30830325_30830788_30831381
ES.25669.16	chr5	+	3129	7	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	781.983944137531	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	9186	False	NA	35	True	AATAAA	-19	NA	30824240	30831748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.17	chr5	+	744	4	FSM	ENSMUSG00000029177.10	ENSMUST00000199320.5	369	4	-59	-316	1	2	multi-exon	FALSE	canonical	2	3	junction_3	727.263821915175	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9187	False	NA	11	True	AATATA	-16	NA	30824241	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30831381
ES.25669.18	chr5	+	1084	6	NIC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	705.748510448304	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGTGGCAGTCCCGCC	9187	False	NA	37	True	AATAAA	-21	NA	30824241	30831750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830610_30830788_30831381
ES.25669.19	chr5	+	1142	8	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	845.685858595597	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGAGCCGTGGCAGT	9187	False	NA	31	True	AATAAA	-15	NA	30824241	30831744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30826342_30826397_30827035_30827173_30827718_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.2	chr5	+	1093	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	-32	-30	-32	-1	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9154	False	NA	39	True	AATAAA	-23	NA	30824208	30831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.20	chr5	+	7340	2	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	1	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAGCCGTGGCAGTC	9187	False	NA	32	True	AATAAA	-16	NA	30824241	30831745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654
ES.25669.21	chr5	+	6340	4	NNC	ENSMUSG00000029177.10	novel	1120	4	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	829.279607048592	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGTGGCAGTCCCGCC	9187	False	NA	37	True	AATAAA	-21	NA	30824241	30831750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30829915_30830325_30830788_30831381
ES.25669.22	chr5	+	5767	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	831.582731903447	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9187	False	NA	39	True	AATAAA	-23	NA	30824241	30831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.23	chr5	+	4330	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	840.543490843871	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTGAATCTGTTGTATG	9187	False	NA	17	True	AATAAA	-1	NA	30824241	30831730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30827295_30829051_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.24	chr5	+	3738	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	1	2974	intron_retention	FALSE	non_canonical	0	0	junction_4	686.259927068454	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTTGTCCATTTTCTT	9187	False	NA	NA	False	NA	NA	NA	30824241	30835148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30832926_30834100
ES.25669.26	chr5	+	3997	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-7	9	intron_retention	FALSE	non_canonical	0	0	junction_1	850.424485510357	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTATGTGAGCCGTG	9194	False	NA	26	True	AATAAA	-10	NA	30824248	30831739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30828058_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.27	chr5	+	1379	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	128	-41	-7	41	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTAAGCTCATCATT	9194	False	NA	NA	False	AGTAAA	-32	NA	30824248	30832215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.28	chr5	+	4120	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-6	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	851.434753160152	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAATTGAAGTAAAGT	9195	False	NA	NA	False	NA	NA	NA	30824249	30832166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.3	chr5	+	3541	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-32	-48	intron_retention	FALSE	non_canonical	0	0	junction_1	789.276620288054	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAATAAATAA	9154	False	NA	NA	False	NA	NA	NA	30824208	30832126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826250_30826589_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.30	chr5	+	2967	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-2	2	intron_retention	FALSE	non_canonical	0	0	junction_2	787.288472473012	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9199	False	NA	11	True	AATATA	-16	NA	30824253	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30824924_30825491_30825654_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.31	chr5	+	3156	8	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	843.16444761048	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGGCAGTCCCGCCAT	9199	False	NA	39	True	AATAAA	-23	NA	30824253	30831752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30827173_30827718_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.32	chr5	+	1471	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	730.066188780168	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTACTGTAATAGATG	9200	False	NA	NA	False	AATGAA	-11	NA	30824254	30832180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824454_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.33	chr5	+	3365	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	-1	2975	intron_retention	FALSE	non_canonical	0	0	junction_4	719.429808945946	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGTCCATTTTCTTA	9200	False	NA	NA	False	NA	NA	NA	30824254	30835149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830788_30831381_30832926_30834100
ES.25669.35	chr5	+	4520	2	NNC	ENSMUSG00000029177.10	novel	346	3	NA	NA	9	839	intron_retention	FALSE	non_canonical	0	0	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTTCAGACATTCCAGA	9210	False	NA	NA	False	NA	NA	NA	30824264	30828948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654
ES.25669.37	chr5	+	7056	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	11	6911	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	665.401953709185	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGATGTATATTTCA	9212	False	NA	NA	False	AATAAA	-19	NA	30824266	30839085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381_30832926_30834100
ES.25669.38	chr5	+	3199	8	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	842.913266896544	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGTGGCAGTCCCGCCA	9217	False	NA	38	True	AATAAA	-22	NA	30824271	30831751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30827173_30827959_30828058_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.4	chr5	+	3164	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-32	1	intron_retention	TRUE	non_canonical	0	0	junction_1	784.48666867789	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGCGCTTGAATCTG	9154	False	NA	10	True	AATATA	-15	NA	30824208	30831723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826250_30826589_30827173_30829807_30829915_30830325_30830404_30830610_30830788_30831381
ES.25669.40	chr5	+	6078	5	NNC	ENSMUSG00000029177.10	novel	993	7	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	743.91565382105	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9219	False	NA	40	True	AATAAA	-24	NA	30824273	30831753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.41	chr5	+	1061	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	787.187186548833	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGTGGCAGTCCCGCC	9220	False	NA	37	True	AATAAA	-21	NA	30824274	30831750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30827035_30827173_30827718_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.42	chr5	+	1023	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	767.707861103428	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9220	False	NA	11	True	AATATA	-16	NA	30824274	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30830932_30831094_30831381
ES.25669.43	chr5	+	6254	3	NNC	ENSMUSG00000029177.10	novel	1120	4	NA	NA	-4	6909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	635	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATGGATGTATATTT	9220	False	NA	NA	False	AATAAA	-17	NA	30824274	30839083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30829842_30833046
ES.25669.44	chr5	+	6533	4	NNC	ENSMUSG00000029177.10	novel	1120	4	NA	NA	-4	2	intron_retention	FALSE	non_canonical	0	0	junction_1	802.708332251925	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9220	False	NA	11	True	AATATA	-16	NA	30824274	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30829915_30830325
ES.25669.45	chr5	+	784	4	NIC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	753.550853551961	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9220	False	NA	11	True	AATATA	-16	NA	30824274	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30824458_30829807_30829915_30830636_30830788_30831381
ES.25669.46	chr5	+	3675	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-4	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	851.434753160152	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGCCGTGGCAGTCC	9220	False	NA	33	True	AATAAA	-17	NA	30824274	30831746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.47	chr5	+	4492	3	NNC	ENSMUSG00000029177.10	novel	1120	4	NA	NA	-4	2974	intron_retention	FALSE	non_canonical	1	3	junction_2	633.5	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTTGTCCATTTTCTT	9220	False	NA	NA	False	NA	NA	NA	30824274	30835148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30829807_30831838_30832869
ES.25669.48	chr5	+	5915	5	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	-3	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	870.241740839866	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATATAAGGAAGAAAAAC	9221	False	NA	-12	True	NA	NA	NA	30824275	30831701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30829915_30830325_30830788_30831381
ES.25669.5	chr5	+	4084	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-31	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	840.543490843871	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	9155	False	NA	35	True	AATAAA	-19	NA	30824209	30831748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30827755_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.50	chr5	+	1709	3	ISM	ENSMUSG00000029177.10	ENSMUST00000150810.8	1120	4	-3	8	-3	-8	intron_retention	FALSE	canonical	3	1270	junction_1	225.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAGCCGTGGCAGTC	9221	False	NA	32	True	AATAAA	-16	NA	30824275	30831745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_30824458_30829807_30829915_30830325
ES.25669.51	chr5	+	6935	3	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	-3	2	intron_retention	FALSE	non_canonical	0	0	junction_1	18.5	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9229	False	NA	11	True	AATATA	-16	NA	30824283	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592
ES.25669.52	chr5	+	1456	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-1	-48	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	790.154415288556	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAATAAATAA	9231	False	NA	NA	False	NA	NA	NA	30824285	30832126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30827035_30827213_30829807_30829915_30830325_30830404_30830610_30830788_30831381
ES.25669.55	chr5	+	3534	5	NIC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	52	-10	intron_retention	FALSE	canonical	3	539	junction_1	511.708107713763	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGTGAGCCGTGGCAG	9339	False	NA	30	True	AATAAA	-14	NA	30824393	30831743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30824458_30827035_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.56	chr5	+	5953	4	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	439	2	intron_retention	FALSE	non_canonical	0	0	junction_1	808.087591511932	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9726	False	NA	11	True	AATATA	-16	NA	30824780	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30830404_30830636_30830788_30831381
ES.25669.57	chr5	+	5446	2	NIC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	1367	-5	intron_retention	FALSE	canonical	3	1795	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCGTGGCAGTCCCG	NA	False	NA	35	True	AATAAA	-19	NA	30825708	30831748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30830788_30831381
ES.25669.58	chr5	+	3850	2	NIC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	-1579	-11	intron_retention	FALSE	canonical	3	1795	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGAAAGAATTGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	30827719	30832163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30830788_30831381
ES.25669.59	chr5	+	1440	5	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	-733	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	743.91565382105	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	NA	False	NA	11	True	AATATA	-16	NA	30828565	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30828604_30829084_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.6	chr5	+	6217	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-30	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	831.582731903447	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAGTAAAGTTACTG	9156	False	NA	NA	False	AATGAA	-2	NA	30824210	30832171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30825491_30825654_30826251_30826592_30829915_30830325_30830404_30830636_30830788_30831381
ES.25669.60	chr5	+	1462	4	NNC	ENSMUSG00000029177.10	novel	1010	4	NA	NA	124	-48	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	819.857846756917	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	30829422	30832126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30829915_30830325_30830404_30830640_30830788_30831381
ES.25669.7	chr5	+	810	2	NNC	ENSMUSG00000029177.10	novel	346	3	NA	NA	-10	10747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTCTCTCCTTTTCTG	9176	False	NA	NA	False	NA	NA	NA	30824230	30842921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30842338
ES.25669.8	chr5	+	7230	7	NNC	ENSMUSG00000029177.10	novel	1007	7	NA	NA	-9	6909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	702.575658242979	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATGGATGTATATTT	9177	False	NA	NA	False	AATAAA	-17	NA	30824231	30839083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381_30832926_30834096
ES.25669.9	chr5	+	1081	6	NNC	ENSMUSG00000029177.10	novel	1031	6	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	726.885300442924	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGCTTGAATCTGT	9178	False	NA	11	True	AATATA	-16	NA	30824232	30831724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30824458_30827035_30827213_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ES.2567.1	chr10	-	4398	5	NNC	ENSMUSG00000039508.7	novel	3711	2	NA	NA	-22392	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTATTCTTTTGTT	8528	False	NA	NA	False	AATAAA	-17	NA	33942698	33914780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_33917889_33919704_33920616_33922818_33922991_33937667_33937817_33942640
ES.25670.1	chr5	+	203	1	Intergenic	novelGene_21365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGACAAAAAAAGTGAGT	6972	False	NA	NA	False	NA	NA	NA	30860800	30861003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30860800_30861000
ES.25671.1	chr5	+	4910	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	276	5	-54	1	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCCTCTGTTGTGTTTTT	NA	False	NA	6	True	ATTAAA	-18	NA	30869183	30956714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.10	chr5	+	5363	12	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	45	junction_9	9.33313655833498	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTGTGTTTTTTCAA	NA	False	NA	10	True	ATTAAA	-22	NA	30869219	30956718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30949672_30951277_30951447_30953580
ES.25671.11	chr5	+	4358	14	NNC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-7	-402	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	18.274047947906	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCTTTCTAGGTTTGT	NA	False	NA	8	True	AATAAA	-18	NA	30869230	30956311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30869347_30902565_30902681_30902782_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.13	chr5	+	3071	1	Intergenic	novelGene_21366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAAGA	6185	False	NA	NA	False	NA	NA	NA	30895604	30898675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30895600_30898700
ES.25671.14	chr5	+	6876	3	NIC	ENSMUSG00000029168.15	novel	1243	5	NA	NA	-483	-2	intron_retention	FALSE	canonical	3	45	junction_1	7	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCGGCCTCTGTTGTGTT	NA	False	NA	3	True	ATTAAA	-15	NA	30945050	30956711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30946185_30948835_30951447_30953580
ES.25671.2	chr5	+	4509	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	276	406	-54	-400	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTAGGTTTGTGG	NA	False	NA	10	True	AATAAA	-20	NA	30869183	30956313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.3	chr5	+	1344	3	NNC	ENSMUSG00000029168.15	novel	1309	3	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGCTGTCTGTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	30869205	30905357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30869347_30902565_30902831_30904419
ES.25671.4	chr5	+	2552	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	298	2341	-32	473	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTGGTTTGCGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	30869205	30954378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.5	chr5	+	5004	14	NNC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.4800683446078	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCTCTGTTGTGTTTT	NA	False	NA	5	True	ATTAAA	-17	NA	30869205	30956713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30869347_30897445_30897563_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.6	chr5	+	1421	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-31	98	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCCCTTATTTTATA	NA	False	NA	4	True	AATAAA	-13	NA	30869206	30944376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
ES.25671.7	chr5	+	6553	12	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	-30	-3	intron_retention	FALSE	canonical	3	45	junction_8	9.44229976189003	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCGGCCTCTGTTGTGT	NA	False	NA	2	True	ATTAAA	-14	NA	30869207	30956710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ES.25671.8	chr5	+	3032	4	NNC	ENSMUSG00000029168.15	novel	1309	3	NA	NA	-25	-13429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.169889330626	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAGAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	30869212	30930849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30869347_30902565_30902831_30928184_30929459_30929490
ES.25672.1	chr5	-	156	1	Intergenic	novelGene_21367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATATCCTGA	884	False	NA	NA	False	NA	NA	NA	30932993	30932837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_30932800_30933000
ES.25673.1	chr5	+	3622	5	NIC	ENSMUSG00000029166.15	novel	2442	6	NA	NA	-9	3	intron_retention	FALSE	canonical	2	5	junction_2	4.49305018890286	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTCCTCAATTGACCC	2289	False	NA	16	True	AATAAA	-16	NA	30972067	31023406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_30972243_31019150_31019279_31019841_31022073_31022158_31022312_31022471
ES.25673.10	chr5	+	2839	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1560	1711	-59	1	multi-exon	FALSE	canonical	3	358	junction_2	22.5422346662881	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCTGTCTGAATCTTC	NA	False	NA	20	True	AATAAA	-20	NA	31026915	31034813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.11	chr5	+	3244	15	NIC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	-46	0	intron_retention	FALSE	canonical	3	358	junction_2	22.8728740508695	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026928	31034807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.12	chr5	+	3379	14	NIC	ENSMUSG00000038828.14	novel	2220	16	NA	NA	-42	-3	intron_retention	FALSE	canonical	3	358	junction_2	23.9889027598451	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTAGCTTTCCTGTC	NA	False	NA	11	True	AATAAA	-11	NA	31026932	31034804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.14	chr5	+	3732	15	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	358	junction_1	21.9745910783619	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026935	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.15	chr5	+	4635	13	NIC	ENSMUSG00000038828.14	novel	2274	14	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	368	junction_4	20.3224014329016	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026937	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.16	chr5	+	2963	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	-34	0	intron_retention	FALSE	canonical	3	358	junction_2	22.4453905191145	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTGTCTGAATCTT	NA	False	NA	19	True	AATAAA	-19	NA	31026940	31034812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.17	chr5	+	3078	16	FSM	ENSMUSG00000038828.14	ENSMUST00000202951.4	3947	16	-33	902	-31	-1	multi-exon	FALSE	canonical	3	358	junction_2	23.0143916326768	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026943	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.18	chr5	+	3840	14	NIC	ENSMUSG00000038828.14	novel	3746	15	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	358	junction_2	19.6272965339287	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026958	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.19	chr5	+	2767	17	NNC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.0997578998032	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31026973	31034805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030036_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.2	chr5	+	1880	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	96	45	4	2	multi-exon	FALSE	canonical	2	2	junction_4	5.53774924194538	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTCCTCAATTGACC	2302	False	NA	15	True	AATAAA	-15	NA	30972080	31023405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ES.25673.20	chr5	+	2905	17	NIC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1	junction_7	98.4280947887848	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTAGCTTTCCTGTC	NA	False	NA	11	True	AATAAA	-11	NA	31026976	31034804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030249_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.21	chr5	+	3542	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_1	21.977159860991	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026976	31034807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.22	chr5	+	3138	15	NIC	ENSMUSG00000038828.14	novel	2220	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_2	23.1789841477673	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026976	31034807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.23	chr5	+	2673	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	99.7363190283927	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026977	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033390_31033560_31033706_31033853_31034007
ES.25673.24	chr5	+	2369	14	NNC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	108.735496890499	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCTAGCTTTCCTGT	NA	False	NA	10	True	AATAAA	-10	NA	31026977	31034803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029452_31030899_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.25	chr5	+	2975	17	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	1	5	intron_retention	FALSE	canonical	0	0	junction_6	133.447086892146	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCTGAATCTTCATAT	NA	False	NA	24	True	AATAAA	-24	NA	31026977	31034817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030204_31030249_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.26	chr5	+	4189	13	NIC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	1	3	intron_retention	FALSE	canonical	3	358	junction_1	23.3803098544243	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCTGAATCTTCAT	NA	False	NA	22	True	AATAAA	-22	NA	31026977	31034815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31028133_31028763_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.27	chr5	+	2847	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	0	-3	intron_retention	FALSE	canonical	3	358	junction_2	22.7346040700563	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTAGCTTTCCTGTC	NA	False	NA	11	True	AATAAA	-11	NA	31026978	31034804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.28	chr5	+	3524	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1623	963	0	-147	multi-exon	FALSE	canonical	3	358	junction_2	22.5422346662881	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTCTGTGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	31026978	31035561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.29	chr5	+	3281	14	NIC	ENSMUSG00000038828.14	novel	2220	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	358	junction_2	24.0369537988697	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026979	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033853_31034007
ES.25673.3	chr5	+	1828	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	-12	0	9	0	multi-exon	FALSE	canonical	2	5	junction_2	4.56131072780134	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	2307	False	NA	13	True	AATAAA	-13	NA	30972085	31023403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
ES.25673.30	chr5	+	3822	14	NIC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	368	junction_5	20.6303045895019	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31026979	31034805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.31	chr5	+	2748	17	NNC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	98.5183794718021	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGACTGGATTTCTAG	NA	False	NA	1	True	AATAAA	-1	NA	31026979	31034794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034015
ES.25673.32	chr5	+	3140	15	NNC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_13	105.181791122197	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31026979	31034805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31032313_31033133_31033231_31033390_31033560_31033683_31033853_31034007
ES.25673.33	chr5	+	3877	14	NNC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_9	109.247885982823	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCTAGCTTTCCTGT	NA	False	NA	10	True	AATAAA	-10	NA	31026979	31034803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31032052_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.34	chr5	+	3117	15	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	358	junction_2	23.1789841477673	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026980	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.35	chr5	+	3182	15	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	358	junction_2	21.2112792482429	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026980	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.36	chr5	+	1904	11	NNC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.199181666654	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026980	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027066_31030395_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.37	chr5	+	2915	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	358	junction_2	23.2793661616653	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31026980	31034807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033853_31034007
ES.25673.39	chr5	+	3228	15	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	9	-2	intron_retention	FALSE	canonical	3	358	junction_2	22.9204480491877	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31026987	31034805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.4	chr5	+	1599	6	NNC	ENSMUSG00000029166.15	novel	2021	7	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.58483105326173	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATGATTTCCTCAATT	2318	False	NA	11	True	AATAAA	-11	NA	30972096	31023401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_30972243_31019150_31019279_31019841_31019988_31021917_31022073_31022217_31022312_31022471
ES.25673.40	chr5	+	2763	17	NNC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	98.3059637051588	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31026990	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033384_31033560_31033706_31033853_31034007
ES.25673.42	chr5	+	2620	16	NNC	ENSMUSG00000038828.14	novel	2220	16	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.807530828192	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCTAGCTTTCCTGT	NA	False	NA	10	True	AATAAA	-10	NA	31026999	31034803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029405_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.43	chr5	+	2246	16	FSM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	25	-51	21	51	multi-exon	FALSE	canonical	2	5	junction_3	100.591230013136	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTGTCCCTGGTCA	NA	False	NA	NA	False	NA	NA	NA	31026999	31034439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.44	chr5	+	3463	14	NIC	ENSMUSG00000038828.14	novel	2220	16	NA	NA	22	-1	intron_retention	FALSE	canonical	3	358	junction_2	22.4349157294379	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31027000	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31029499_31029844_31029951_31030030_31030113_31030386_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.46	chr5	+	3772	16	NIC	ENSMUSG00000038828.14	novel	6110	17	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_7	134.763430581973	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGCTTTCCTGTCTGA	NA	False	NA	14	True	AATAAA	-14	NA	31027001	31034807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030204_31030249_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31033560_31033706_31033853_31034007
ES.25673.47	chr5	+	2386	15	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	3407	1718	-354	-1	3prime_fragment	FALSE	canonical	3	368	junction_6	20.4165798970806	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31028762	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.48	chr5	+	2994	11	NIC	ENSMUSG00000038828.14	novel	2274	14	NA	NA	-58	-2	intron_retention	FALSE	canonical	3	368	junction_3	19.5202459000905	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTAGCTTTCCTGTCT	NA	False	NA	12	True	AATAAA	-12	NA	31029058	31034805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.49	chr5	+	2287	8	NIC	ENSMUSG00000038828.14	novel	2274	14	NA	NA	1263	-1	intron_retention	FALSE	canonical	3	384	junction_1	20.0193783670743	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	31030424	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033853_31034007
ES.25673.5	chr5	+	8964	23	Fusion	ENSMUSG00000029166.15_ENSMUSG00000038828.14	novel	6110	17	NA	NA	36	-1	intron_retention	TRUE	canonical	0	0	junction_8	192.568271675783	427	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGCTTTCCTGTCTG	2361	False	NA	13	True	AATAAA	-13	NA	30972139	31034806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471_31028133_31028763_31028915_31029077_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030204_31030249_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ES.25673.6	chr5	+	159	1	FSM	ENSMUSG00000106229.2	ENSMUST00000198244.2	2858	1	2679	20	2679	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATGAAAAAAGATT	5864	False	NA	NA	False	NA	NA	NA	30975642	30975801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_30975600_30975800
ES.25673.7	chr5	+	179	1	Intergenic	novelGene_21368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAGTAA	NA	False	NA	NA	False	NA	NA	NA	30986978	30987157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_30987000_30987200
ES.25673.8	chr5	+	200	1	Intergenic	novelGene_21369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGAGAGACCTTTA	NA	False	NA	NA	False	NA	NA	NA	31000274	31000474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31000300_31000500
ES.25673.9	chr5	+	174	1	Intergenic	novelGene_21370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGAGCTAGCGGCGTT	NA	False	NA	NA	False	NA	NA	NA	31002243	31002417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31002200_31002400
ES.25674.1	chr5	+	3775	10	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	-102	-2	intron_retention	TRUE	canonical	3	35	junction_8	4.2716406192758	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGCTGCAGCCTGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	31045935	31053436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.10	chr5	+	3737	11	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	31	junction_10	5.53263047744922	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGATGACTACTCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	31046297	31060832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
ES.25674.11	chr5	+	3701	16	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	6.71118469422501	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046298	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.12	chr5	+	3316	13	NNC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	13.1495141439607	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31046301	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060456_31063448
ES.25674.13	chr5	+	3785	17	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	12.3888811036348	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046301	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.14	chr5	+	3175	17	NNC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.5633640277772	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046301	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459_31063576_31063655
ES.25674.15	chr5	+	3208	15	FSM	ENSMUSG00000029165.18	ENSMUST00000201168.4	3199	15	-11	2	2	-2	multi-exon	FALSE	canonical	2	6	junction_1	13.4651856463175	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046301	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ES.25674.16	chr5	+	3644	15	NNC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.3874945699382	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046301	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050799_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ES.25674.17	chr5	+	3202	16	NNC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.9608977743792	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31046301	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046426_31047463_31047725_31047942_31048115_31048451_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.18	chr5	+	3250	16	FSM	ENSMUSG00000029165.18	ENSMUST00000201917.4	3579	16	23	306	2	-7	multi-exon	FALSE	canonical	2	6	junction_1	10.2792131129879	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31046301	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.19	chr5	+	3273	15	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	2	-25	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	6.44165335602465	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTAGTCCCTGATTTTT	NA	False	NA	NA	False	ACTAAA	-15	NA	31046301	31063229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974
ES.25674.2	chr5	+	5626	6	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	-69	-1	intron_retention	FALSE	canonical	3	6	junction_1	18.3782480122562	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTGCAGCCTGTCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	31045968	31053437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31048115_31048217_31048305_31048403_31048568_31049156_31051855_31052340_31052544_31053109
ES.25674.20	chr5	+	4380	16	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	2	-2	intron_retention	FALSE	canonical	3	6	junction_2	12.5485722959493	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046301	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.21	chr5	+	3648	15	NIC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_13	11.0787993897519	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046304	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ES.25674.22	chr5	+	2430	8	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	17.2188790552221	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTGTCCTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	31046308	31051177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348
ES.25674.23	chr5	+	3768	15	NNC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.4647707149728	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046320	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31047005_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ES.25674.24	chr5	+	3607	9	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	4	-2	intron_retention	FALSE	canonical	3	35	junction_7	4.52596674755792	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGCTGCAGCCTGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	31046321	31053436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.25	chr5	+	3122	12	FSM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	4	-5	4	5	multi-exon	FALSE	canonical	3	26	junction_1	7.05585742252082	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGACTACTCTGCACAG	NA	False	NA	NA	False	AATAAA	-19	NA	31046321	31060836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
ES.25674.27	chr5	+	3850	14	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	5	-22	intron_retention	FALSE	canonical	3	31	junction_10	5.31827262075188	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCCCTGATTTTTATT	NA	False	NA	NA	False	ACTAAA	-18	NA	31046322	31063232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974
ES.25674.28	chr5	+	3190	13	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	14.1735277503129	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCTGGATGACTACTCT	NA	False	NA	NA	False	AATAAA	-13	NA	31046334	31060830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
ES.25674.29	chr5	+	1883	7	ISM	ENSMUSG00000029165.18	ENSMUST00000201918.4	2352	11	23	2241	-9	10	5prime_fragment	FALSE	canonical	2	6	junction_1	14.8408220796558	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCCCTTCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	31046335	31051187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348
ES.25674.3	chr5	+	4829	14	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	-62	-7	intron_retention	FALSE	canonical	0	0	junction_8	11.9975342634379	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31045975	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053112_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.30	chr5	+	6436	8	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	-142	-7	intron_retention	FALSE	canonical	0	0	junction_6	19.0370208610829	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31046527	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31048115_31048217_31048305_31048403_31048568_31049156_31051855_31052340_31052544_31053109_31053325_31062046_31062500_31062974
ES.25674.31	chr5	+	6039	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	244	3910	-108	2890	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64529909033446	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCAGGTGTGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	31046561	31056921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.32	chr5	+	6049	12	FSM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	249	-3177	-103	-2	multi-exon	FALSE	canonical	3	26	junction_1	7.05585742252082	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046566	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
ES.25674.33	chr5	+	3697	15	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	26	junction_1	6.44165335602465	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046656	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974
ES.25674.34	chr5	+	2479	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	341	7373	-11	-1	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64529909033446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTATGGTGTTCCCGCGGC	NA	False	NA	NA	False	AATAAA	-38	NA	31046658	31053458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.36	chr5	+	4613	12	NNC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	0	2898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	13.5847508091041	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTGCATGTATGTA	NA	False	NA	NA	False	NA	NA	NA	31046669	31056929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31054677_31056002
ES.25674.37	chr5	+	3214	15	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	17.3641960977884	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046669	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31062046_31062160_31062974_31063106_31063459
ES.25674.38	chr5	+	3459	16	NNC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5566238822398	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046676	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31047005_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.39	chr5	+	3243	16	NNC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.9109527030818	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046679	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046792_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.4	chr5	+	3217	16	NNC	ENSMUSG00000029165.18	novel	768	6	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8748856204753	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31045982	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31046047_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062430_31062500_31062974_31063106_31063459
ES.25674.40	chr5	+	3344	11	ISM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	362	6487	10	313	5prime_fragment	FALSE	canonical	3	26	junction_1	6.64529909033446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGATTAGTAATGATCA	NA	False	NA	NA	False	AATAAA	-26	NA	31046679	31054344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.41	chr5	+	3561	8	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	15	-3	intron_retention	FALSE	canonical	3	26	junction_1	7.69839633446142	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGCTGCAGCCTGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	31046684	31053435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31051855_31052340_31052544_31053109
ES.25674.42	chr5	+	2975	16	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	18	-24	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	12.7146459731375	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTCCCTGATTTTTA	NA	False	NA	NA	False	ACTAAA	-16	NA	31046687	31063230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974
ES.25674.43	chr5	+	3293	16	NIC	ENSMUSG00000029165.18	novel	3121	12	NA	NA	72	-7	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	14.6581793624659	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	False	NA	3	True	AATAAA	-11	NA	31046741	31064003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ES.25674.5	chr5	+	3203	16	NIC	ENSMUSG00000029165.18	novel	768	6	NA	NA	77	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.5566238822398	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	NA	False	NA	8	True	AATAAA	-16	NA	31046114	31064008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046187_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.6	chr5	+	4321	15	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	30	junction_14	5.87497286142234	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTAGTTGCTTTGTATG	NA	False	NA	11	True	AATAAA	-19	NA	31046276	31064011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ES.25674.7	chr5	+	6401	12	NIC	ENSMUSG00000029165.18	novel	3296	17	NA	NA	5	2893	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	14.7407345881522	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGTGGTGGTGCATGT	NA	False	NA	NA	False	NA	NA	NA	31046289	31056924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048217_31048305_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109
ES.25674.8	chr5	+	8668	5	Fusion	ENSMUSG00000107201.2_ENSMUSG00000029165.18	novel	2922	11	NA	NA	6	-36	intron_retention	FALSE	canonical	3	35	junction_3	5.58457697592217	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGACTTGTGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	31046290	31056888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_31048115_31048403_31048568_31049156_31051855_31052340_31052544_31053109
ES.25674.9	chr5	+	8952	11	Fusion	ENSMUSG00000107201.2_ENSMUSG00000029165.18	novel	2922	11	NA	NA	-3	-1786	intron_retention	FALSE	non_canonical	0	0	junction_9	17.6819116613561	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAACTGAGATT	NA	False	NA	NA	False	NA	NA	NA	31046296	31059045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053112_31054721_31054788
ES.25675.1	chr5	-	4715	2	Antisense	novelGene_ENSMUSG00000107201.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31059456	31054672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31054719_31054787
ES.25675.2	chr5	-	2841	1	Antisense	novelGene_ENSMUSG00000107201.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTTTTATGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	31058232	31055391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31055400_31058200
ES.25676.1	chr5	-	1067	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	72	5	9	-5	multi-exon	FALSE	canonical	3	823	junction_2	132.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTAATGAAAGTGCATT	NA	False	NA	NA	False	AATAAA	-14	NA	31065060	31063233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31064111_31064742_31064881_31065008
ES.25676.2	chr5	-	545	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	-31	630	-31	3	multi-exon	FALSE	canonical	3	823	junction_2	132.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTGGTCCCAAAATC	NA	False	NA	-2	True	NA	NA	NA	31065163	31063858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31064111_31064742_31064881_31065008
ES.25676.3	chr5	-	1209	1	NIC	ENSMUSG00000038803.8	novel	1144	3	NA	NA	-2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTGTGGTCCCAA	NA	False	NA	-6	True	NA	NA	NA	31065071	31063862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31063900_31065100
ES.25677.1	chr5	+	184	1	Intergenic	novelGene_21371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAGAGATTTCTCA	NA	False	NA	9	True	NA	NA	NA	31067425	31067609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31067400_31067600
ES.25678.1	chr5	+	3873	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	-22	1	-22	-1	multi-exon	TRUE	canonical	2	6	junction_1	4.70345075232981	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTATTCTGCTCTAGTA	NA	False	NA	21	True	AATAAA	-26	NA	31070723	31078620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
ES.25678.2	chr5	+	3688	7	NNC	ENSMUSG00000029163.10	novel	3852	8	NA	NA	159	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6.44635986860457	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTATTCTGCTCTAGT	NA	False	NA	20	True	AATAAA	-25	NA	31070904	31078619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076732_31077423_31077562_31077958
ES.25678.3	chr5	+	4198	6	ISM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	180	2	-157	-2	intron_retention	FALSE	canonical	2	6	junction_1	3.74165738677394	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTATTCTGCTCTAGT	NA	False	NA	20	True	AATAAA	-25	NA	31070925	31078619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274
ES.25678.4	chr5	+	2912	5	NNC	ENSMUSG00000029163.10	novel	3852	8	NA	NA	2514	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.347903928532	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAAACATAGCTATTCT	NA	False	NA	12	True	AATAAA	-17	NA	31073596	31078611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31073663_31074277_31076204_31076599_31076717_31077411_31077562_31077958
ES.25678.5	chr5	+	1837	4	NNC	ENSMUSG00000029163.10	novel	3852	8	NA	NA	-1972	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.33999733546453	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAGCTATTCTGCTC	428	False	NA	16	True	AATAAA	-21	NA	31075292	31078615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31076204_31076599_31076731_31077423_31077562_31077958
ES.25679.1	chr5	+	3296	7	NIC	ENSMUSG00000029162.16	novel	1257	9	NA	NA	-49	-6	intron_retention	FALSE	canonical	2	6	junction_2	7.76745346515403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCAGCTTTGTCTGTCT	1093	False	NA	0	True	AATAAA	-9	NA	31078884	31088583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31079352_31082082_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ES.25679.2	chr5	+	1468	8	NIC	ENSMUSG00000029162.16	novel	1257	9	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	9.11379309013519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	1095	False	NA	6	True	AATAAA	-15	NA	31078886	31088589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31079352_31082082_31082200_31084031_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ES.25679.3	chr5	+	996	7	FSM	ENSMUSG00000029162.16	ENSMUST00000201571.4	1087	7	290	-199	22	0	multi-exon	FALSE	canonical	3	16	junction_1	5.24933858267454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	1432	False	NA	6	True	AATAAA	-15	NA	31079223	31088589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31079352_31082082_31082200_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ES.25679.4	chr5	+	1073	8	NNC	ENSMUSG00000029162.16	novel	1257	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.034633902192	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	1432	False	NA	6	True	AATAAA	-15	NA	31079223	31088589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31079352_31082082_31082200_31084089_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ES.25679.5	chr5	+	3131	5	NIC	ENSMUSG00000029162.16	novel	789	7	NA	NA	24	0	intron_retention	FALSE	canonical	2	6	junction_2	7.8541390362025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTCTGTCTGTCTG	1434	False	NA	9	True	AATAAA	-18	NA	31079225	31088592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31079352_31082082_31084167_31085786_31085860_31086864_31087012_31087891
ES.2568.1	chr10	-	5266	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	58	-1	58	1	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTCTAGTTTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	33972457	33963809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33968512_33971893
ES.2568.2	chr10	-	1713	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	2	3608	2	-3608	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCCATTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	33972513	33967418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_33968512_33971893
ES.25680.1	chr5	-	2499	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	58	-1115	58	1115	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTGTGACAAGGAAGC	5354	False	NA	NA	False	ATTAAA	-14	NA	31102877	31089371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
ES.25680.2	chr5	-	1380	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	54	8	54	-8	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCACAGCCATGTGTCCT	5350	False	NA	-7	True	AATAAA	-17	NA	31102881	31090494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
ES.25681.1	chr5	+	182	1	Intergenic	novelGene_21372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATCAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	31105831	31106013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31105800_31106000
ES.25682.1	chr5	+	1416	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	-26	-38	-26	38	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGAACTCACTATGTGT	NA	False	NA	57	True	NA	NA	NA	31107383	31112473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
ES.25682.2	chr5	+	1629	7	NIC	ENSMUSG00000006638.16	novel	1309	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	61	junction_1	7.15114598430831	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGCTGAGGTTCCCTTT	NA	False	NA	17	True	ATTAAA	-19	NA	31107395	31112433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111610_31111748_31111798_31111877_31112044_31112159
ES.25682.3	chr5	+	4738	3	NIC	ENSMUSG00000006638.16	novel	1352	9	NA	NA	5	-1	intron_retention	FALSE	canonical	3	67	junction_2	6	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGAGCTGAGGTTCCCTT	NA	False	NA	16	True	ATTAAA	-18	NA	31107414	31112432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31110870_31111010_31111610_31111748
ES.25682.4	chr5	+	4246	6	NIC	ENSMUSG00000006638.16	novel	1309	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	67	junction_3	5.2687759489278	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGCTGAGGTTCCCTTT	NA	False	NA	17	True	ATTAAA	-19	NA	31107414	31112433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31110390_31110686_31110870_31111010_31111610_31111748_31111798_31111877_31112044_31112159
ES.25683.1	chr5	-	5961	7	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-15	-815	intron_retention	FALSE	canonical	0	0	junction_4	102.67207777948	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCTGTTCTATCTTACA	NA	False	NA	NA	False	CATAAA	-20	NA	31117639	31109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115484_31115702_31115814_31116757_31117314
ES.25683.10	chr5	-	2013	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	152	0	intron_retention	FALSE	canonical	3	205	junction_6	28.9573930498741	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117444	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31116281_31116566_31116757_31117314
ES.25683.12	chr5	-	1776	7	NIC	ENSMUSG00000045302.14	novel	1869	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	89.9981481290958	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117604	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.13	chr5	-	2441	8	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_4	95.0937239071571	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117658	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115484_31115702_31115814_31115896_31116059_31116757_31117314
ES.25683.14	chr5	-	2229	9	NNC	ENSMUSG00000045302.14	novel	1869	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	120.736735813919	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117604	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31116847_31117201_31117287
ES.25683.15	chr5	-	2114	8	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_7	94.2183742208298	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117596	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117487
ES.25683.16	chr5	-	2741	5	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	247	junction_4	20.920982290514	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCAGCAGTCCTCTTG	NA	False	NA	-10	True	AATAAA	-19	NA	31117604	31112388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31116757_31117314
ES.25683.18	chr5	-	1837	9	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.0490560028572	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCAGCAGTCCTCTTG	NA	False	NA	-10	True	AATAAA	-19	NA	31117624	31112388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117504
ES.25683.19	chr5	-	1937	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	86.5256833405609	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCAGCAGTCCTCTTG	NA	False	NA	-10	True	AATAAA	-19	NA	31117607	31112388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.2	chr5	-	5381	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	101	818	2	-818	multi-exon	TRUE	canonical	3	205	junction_7	28.1735691739616	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATCCTGTTCTATCTT	NA	False	NA	NA	False	CATAAA	-17	NA	31117604	31109014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.20	chr5	-	2488	7	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	239	junction_4	21.0666930379582	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCCAGCAGTCCTCTT	NA	False	NA	-11	True	AATAAA	-18	NA	31117636	31112389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31116757_31117314
ES.25683.21	chr5	-	2430	10	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	106.06915982823	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCCAGCAGTCCTCTT	NA	False	NA	-11	True	AATAAA	-18	NA	31117675	31112389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31116847_31117201_31117314
ES.25683.22	chr5	-	1740	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	97	4463	-2	51	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTGTTTCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	31117608	31112659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.3	chr5	-	5652	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	0	-825	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAACTTAGATCCTGTT	NA	False	NA	NA	False	CATAAA	-10	NA	31117596	31109021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
ES.25683.4	chr5	-	2669	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	106	3525	-3	620	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCCTGCACCTAACCC	NA	False	NA	NA	False	AATACA	-13	NA	31117599	31111721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.5	chr5	-	2085	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	28	4187	28	3	multi-exon	FALSE	canonical	3	205	junction_7	28.1735691739616	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCAGTCCTCTTGTCAGC	NA	False	NA	-5	True	AATAAA	-24	NA	31117677	31112383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.6	chr5	-	1519	7	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	101.345394019111	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117495	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115650_31116593_31116757_31117314
ES.25683.7	chr5	-	1848	8	FSM	ENSMUSG00000045302.14	ENSMUST00000202567.2	1869	8	21	0	3	0	multi-exon	FALSE	canonical	1	3	junction_1	89.9026684582742	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117603	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31113082_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ES.25683.8	chr5	-	2363	8	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	33	0	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117672	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
ES.25683.9	chr5	-	2104	8	NNC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_7	94.8995172134555	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117604	31112386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116745_31117493
ES.25684.1	chr5	+	161	1	Intergenic	novelGene_21373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	31167350	31167511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31167400_31167500
ES.25685.1	chr5	+	210	1	Intergenic	novelGene_21375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACAAGTAGGGGCCTAG	3176	False	NA	NA	False	NA	NA	NA	31183372	31183582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31183400_31183600
ES.25686.1	chr5	+	116	1	Intergenic	novelGene_21377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	9785	False	NA	NA	False	NA	NA	NA	31189981	31190097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31190000_31190100
ES.25687.1	chr5	+	1968	6	NIC	ENSMUSG00000013622.16	novel	966	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	250	junction_5	24.1859463325296	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGCTGCCGTACCTG	605	False	NA	6	True	AATAAA	-19	NA	31205675	31211961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ES.25687.10	chr5	+	651	4	NIC	ENSMUSG00000013622.16	novel	966	7	NA	NA	-1674	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	132.55020013397	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCCGTACCTGTGC	4469	False	NA	9	True	AATAAA	-22	NA	31209539	31211964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31209613_31210106_31210229_31211304_31211403_31211606
ES.25687.100	chr5	+	3245	18	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	17520	-595	-9	595	3prime_fragment	FALSE	canonical	3	560	junction_2	144.213293591274	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGTGTAGAATGTCTT	8872	False	NA	NA	False	NA	NA	NA	31229643	31236418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.101	chr5	+	2719	17	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	17624	0	95	0	3prime_fragment	FALSE	canonical	3	560	junction_1	145.04864485751	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	8976	False	NA	18	True	AATAAA	-14	NA	31229747	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.102	chr5	+	3318	10	NIC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	884	7	intron_retention	FALSE	canonical	3	655	junction_3	158.220739693429	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATGAGTACTATAGGCT	9765	False	NA	25	True	AATAAA	-21	NA	31230536	31235830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31234231_31234436_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.103	chr5	+	2104	14	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	18709	0	-628	0	3prime_fragment	FALSE	canonical	3	655	junction_4	139.669389851672	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31230832	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.104	chr5	+	2573	9	NIC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	-19	-8	intron_retention	FALSE	canonical	3	655	junction_3	166.056419252614	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGGTTCGTCA	NA	False	NA	10	True	AATAAA	-6	NA	31231441	31235815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.105	chr5	+	4749	1	Genic_Genomic	ENSMUSG00000013629.17	novel	NA	NA	NA	NA	791	1177	mono-exon	FALSE	NA	NA	NA	NA	NA	1003	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAACAGGTCATT	NA	False	NA	NA	False	NA	NA	NA	31232251	31237000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_31232300_31237000
ES.25687.106	chr5	+	3188	4	NIC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	271	1181	intron_retention	FALSE	canonical	3	921	junction_2	84.2707277502429	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAACAGGTCATTTCTG	NA	False	NA	NA	False	NA	NA	NA	31233427	31237004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.107	chr5	+	1156	7	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	21436	0	403	0	3prime_fragment	FALSE	canonical	3	761	junction_1	129.877720268806	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31233559	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.109	chr5	+	1754	3	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	22790	-1145	1757	1145	3prime_fragment	FALSE	canonical	3	921	junction_1	99.5	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31234913	31236968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31235041_31235232_31235328_31235436
ES.25687.11	chr5	+	7222	45	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	63	junction_35	184.37253850437	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCGTCATGAGTACTA	7020	False	NA	19	True	AATAAA	-15	NA	31212090	31235824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.110	chr5	+	1486	2	Intergenic	novelGene_21378	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAAGCCTGATATT	NA	False	NA	NA	False	AATAAA	-6	NA	31238495	31243071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31239206_31242295
ES.25687.111	chr5	+	172	1	Intergenic	novelGene_21379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATTTAATTAAATAA	6176	False	NA	NA	False	NA	NA	NA	31258092	31258264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31258100_31258300
ES.25687.112	chr5	+	2055	5	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	16	junction_4	4.32290411644765	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	3	True	AATAAA	-15	NA	31265662	31269868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31265766_31266230_31267053_31267521_31267664_31268456_31268524_31268947
ES.25687.113	chr5	+	2523	4	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	16	junction_3	4.98887651569859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	3	True	AATAAA	-15	NA	31265663	31269868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31265766_31266230_31267664_31268456_31268524_31268947
ES.25687.114	chr5	+	1348	5	FSM	ENSMUSG00000053856.8	ENSMUST00000202760.4	670	5	3	-681	1	-2	multi-exon	FALSE	canonical	3	9	junction_2	6.86931583201704	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGTGTGTGTGGGAC	NA	False	NA	3	True	AATAAA	-15	NA	31265663	31269868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31265766_31266230_31266347_31267521_31267664_31268456_31268524_31268947
ES.25687.115	chr5	+	1058	1	Intergenic	novelGene_21380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTGCTTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	31271466	31272524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31271500_31272500
ES.25687.116	chr5	+	1538	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	-104	0	-104	0	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGGCTCCTTTTGCTGT	NA	False	NA	6	True	AATAAA	-19	NA	31273951	31294972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ES.25687.117	chr5	+	4529	2	Antisense	novelGene_ENSMUSG00000101678.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAGAAAA	3241	False	NA	NA	False	NA	NA	NA	31301036	31306277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31302126_31302837
ES.25687.118	chr5	+	3078	9	Antisense	novelGene_ENSMUSG00000106864.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	31324988	31333275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31325148_31325331_31325448_31325597_31325823_31326394_31326496_31327181_31327262_31327525_31327619_31330125_31330408_31331111_31331436_31331577
ES.25687.119	chr5	+	178	1	Intergenic	novelGene_21383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	31329126	31329304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31329100_31329300
ES.25687.12	chr5	+	6986	44	FSM	ENSMUSG00000013629.17	ENSMUST00000202795.4	6559	44	-180	-247	-32	0	multi-exon	FALSE	canonical	2	10	junction_39	167.401038305453	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7021	False	NA	18	True	AATAAA	-14	NA	31212091	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234048_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.120	chr5	+	4670	1	Antisense	novelGene_ENSMUSG00000101678.4_AS_novelGene_ENSMUSG00000106864.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTTGGGATTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	31336748	31341418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31336700_31341400
ES.25687.121	chr5	+	5129	1	Intergenic	novelGene_21384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGTTCCTTTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	31337938	31343067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31337900_31343100
ES.25687.15	chr5	+	8788	41	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-7	1179	intron_retention	FALSE	canonical	3	481	junction_6	121.724648284561	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAACAGGTCATTTC	7046	False	NA	NA	False	NA	NA	NA	31212116	31237002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232
ES.25687.18	chr5	+	7184	45	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	207.236414033955	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7051	False	NA	18	True	AATAAA	-14	NA	31212121	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218806_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.19	chr5	+	7734	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	-1	-596	-1	596	multi-exon	FALSE	canonical	3	481	junction_6	136.90610173497	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTGTAGAATGTCTTA	7052	False	NA	NA	False	NA	NA	NA	31212122	31236419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.2	chr5	+	982	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	-18	2	-18	-2	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCGTACCTGTGCG	890	False	NA	10	True	AATAAA	-23	NA	31205960	31211965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ES.25687.22	chr5	+	6932	43	FSM	ENSMUSG00000013629.17	ENSMUST00000201182.4	6529	43	-149	-254	-1	7	multi-exon	FALSE	canonical	1	3	junction_38	169.127492867178	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATGAGTACTATAGGCT	7052	False	NA	25	True	AATAAA	-21	NA	31212122	31235830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.23	chr5	+	7100	44	NNC	ENSMUSG00000013629.17	novel	6559	44	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	216.312170510285	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	7052	False	NA	17	True	AATAAA	-13	NA	31212122	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219118_31219311_31219544_31219670_31219805_31219937_31223888_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234048_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.24	chr5	+	7723	42	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	1	0	intron_retention	FALSE	canonical	3	481	junction_6	137.587577431302	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7054	False	NA	18	True	AATAAA	-14	NA	31212124	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.26	chr5	+	7112	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	169.377976325882	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	7064	False	NA	16	True	AATAAA	-12	NA	31212134	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231625_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.28	chr5	+	7179	45	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	196.495719203471	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	7066	False	NA	16	True	AATAAA	-12	NA	31212136	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234857_31234938_31235041_31235232_31235328_31235436
ES.25687.3	chr5	+	860	7	NNC	ENSMUSG00000013622.16	novel	966	7	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	110.557300377074	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAATGCTGCCGTACCT	940	False	NA	5	True	AATAAA	-18	NA	31206010	31211960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210173_31210229_31211304_31211403_31211606
ES.25687.37	chr5	+	7263	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	169.824440893283	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	7069	False	NA	17	True	AATAAA	-13	NA	31212139	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31223888_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.38	chr5	+	2676	16	NNC	ENSMUSG00000013629.17	novel	3153	18	NA	NA	-15	110874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	149.783161789153	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAACAGAAACAGAAAAAG	7069	False	NA	NA	False	NA	NA	NA	31212139	31346697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31346467
ES.25687.4	chr5	+	1614	2	ISM	ENSMUSG00000013622.16	ENSMUST00000201773.4	455	5	19	3008	8	-1784	5prime_fragment	FALSE	canonical	3	287	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAGAAAGAAAAA	940	False	NA	NA	False	NA	NA	NA	31206010	31208329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31206101_31206805
ES.25687.40	chr5	+	7142	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	170.017283504068	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232411_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.45	chr5	+	7102	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	195.692347479628	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGGTTCGTCA	7069	False	NA	10	True	AATAAA	-6	NA	31212139	31235815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231527_31231613_31231755_31231937_31232040_31232432_31232530_31233157_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.46	chr5	+	7093	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	170.00272641214	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224562_31224763_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.47	chr5	+	7094	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	169.99838703781	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGTTCGTCATGAGT	7069	False	NA	15	True	AATAAA	-11	NA	31212139	31235820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230858_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.48	chr5	+	5666	37	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	185.024245575052	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224468_31227940_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.49	chr5	+	6205	38	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	181.688062975815	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230281_31233157_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.5	chr5	+	8015	50	Fusion	ENSMUSG00000013629.17_ENSMUSG00000013622.16	novel	7137	44	NA	NA	8	0	multi-exon	TRUE	non_canonical	0	0	junction_1	225.302671150733	1068	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	940	False	NA	18	True	AATAAA	-14	NA	31206010	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_31206101_31209522_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606_31211858_31211963_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226573_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.50	chr5	+	7495	43	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_34	171.208145323005	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7069	False	NA	18	True	AATAAA	-14	NA	31212139	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232439_31232530_31233152_31233198_31233298_31233469_31233561_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.52	chr5	+	7049	45	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.179417492395	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	7070	False	NA	16	True	AATAAA	-12	NA	31212140	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212271_31212335_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231033_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.53	chr5	+	7185	45	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	194.035657187875	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	7072	False	NA	17	True	AATAAA	-13	NA	31212142	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31228898_31228967_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.54	chr5	+	7110	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	169.404527674897	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7073	False	NA	18	True	AATAAA	-14	NA	31212143	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230168_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.58	chr5	+	7099	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	169.866052915045	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7115	False	NA	18	True	AATAAA	-14	NA	31212185	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224300_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.59	chr5	+	7066	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	169.735017610843	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7120	False	NA	18	True	AATAAA	-14	NA	31212190	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227025_31227636_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.6	chr5	+	875	7	FSM	ENSMUSG00000013622.16	ENSMUST00000200748.4	548	7	-54	-273	9	0	multi-exon	FALSE	canonical	2	19	junction_6	104.663614605183	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGCTGCCGTACCTG	941	False	NA	6	True	AATAAA	-19	NA	31206011	31211961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211658
ES.25687.60	chr5	+	7020	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	38	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.272471491862	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAGGCTAGCAGAGGA	7122	False	NA	34	True	AATAAA	-30	NA	31212192	31235839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218235_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.62	chr5	+	5851	36	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	185.052014750624	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7155	False	NA	18	True	AATAAA	-14	NA	31212225	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230044_31233383_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.63	chr5	+	7458	43	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-44	0	intron_retention	FALSE	canonical	0	0	junction_33	172.029240316318	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7157	False	NA	18	True	AATAAA	-14	NA	31212227	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232180_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.64	chr5	+	6952	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	170.017283504068	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7231	False	NA	18	True	AATAAA	-14	NA	31212301	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229907_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.65	chr5	+	6914	44	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	237.422059170243	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7247	False	NA	18	True	AATAAA	-14	NA	31212317	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31212381_31212586_31212727_31215418_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217976_31218181_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227923_31228017_31229208_31229449_31229645_31229728_31229900_31230062_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.66	chr5	+	6881	43	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	462	0	287	0	3prime_fragment	FALSE	canonical	3	481	junction_5	137.482862259141	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7515	False	NA	18	True	AATAAA	-14	NA	31212585	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.67	chr5	+	6668	42	ISM	ENSMUSG00000013629.17	ENSMUST00000201182.4	6529	43	314	-247	287	0	3prime_fragment	FALSE	canonical	1	3	junction_37	170.620671210666	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7515	False	NA	18	True	AATAAA	-14	NA	31212585	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.68	chr5	+	6742	42	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	3287	0	-607	0	3prime_fragment	FALSE	canonical	3	481	junction_4	138.431826588868	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31215410	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.69	chr5	+	7324	42	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-603	595	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_33	172.706602345578	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGTGTAGAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	31215414	31236418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232521_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.7	chr5	+	872	7	FSM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	248	-226	248	1	multi-exon	FALSE	canonical	3	6	junction_1	108.191830663051	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGCCGTACCTGTG	1306	False	NA	8	True	AATAAA	-21	NA	31206376	31211963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31206409_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ES.25687.70	chr5	+	6612	41	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	3895	0	1	0	3prime_fragment	FALSE	canonical	3	481	junction_3	138.705046771918	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31216018	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.71	chr5	+	6605	41	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	173.619539150984	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	NA	False	NA	17	True	AATAAA	-13	NA	31216018	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234023_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.72	chr5	+	7251	40	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	45	0	intron_retention	FALSE	canonical	3	63	junction_30	194.299493638402	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31216062	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.73	chr5	+	6553	39	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	427	0	intron_retention	FALSE	canonical	3	481	junction_2	139.878845479731	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31216444	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.74	chr5	+	6153	38	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	4997	2	1103	-2	3prime_fragment	FALSE	canonical	3	496	junction_3	137.079471812534	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	NA	False	NA	16	True	AATAAA	-12	NA	31217120	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.75	chr5	+	5856	36	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	5697	2	-1317	-2	3prime_fragment	FALSE	canonical	3	496	junction_1	135.118560183723	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	NA	False	NA	16	True	AATAAA	-12	NA	31217820	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.76	chr5	+	5674	36	ISM	ENSMUSG00000013629.17	ENSMUST00000202795.4	6559	44	5549	-246	-1317	-1	3prime_fragment	FALSE	canonical	2	10	junction_31	175.740197857113	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	NA	False	NA	17	True	AATAAA	-13	NA	31217820	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234048_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.77	chr5	+	6451	36	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	5698	-594	-1316	594	3prime_fragment	FALSE	canonical	3	496	junction_1	135.118560183723	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGTGTAGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	31217821	31236417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.78	chr5	+	5787	36	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-1256	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	199.079793252938	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31217881	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229652_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234941_31235041_31235232_31235328_31235436
ES.25687.8	chr5	+	8223	52	Fusion	ENSMUSG00000013629.17_ENSMUSG00000013622.16	novel	7137	44	NA	NA	249	7	multi-exon	FALSE	non_canonical	0	0	junction_1	224.319213562372	1068	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATGAGTACTATAGGCT	1307	False	NA	25	True	AATAAA	-21	NA	31206377	31235830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_31206430_31206473_31206607_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606_31211858_31211963_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.80	chr5	+	4720	29	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-609	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	193.224874280762	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	NA	False	NA	17	True	AATAAA	-13	NA	31218528	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31230851_31233323_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.81	chr5	+	5652	32	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-266	0	intron_retention	FALSE	canonical	3	519	junction_3	132.018311409238	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	NA	False	NA	18	True	AATAAA	-14	NA	31218871	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.82	chr5	+	5157	33	NNC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-163	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	179.45588061119	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	NA	False	NA	16	True	AATAAA	-12	NA	31218974	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232521_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.83	chr5	+	4887	29	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	405	0	intron_retention	FALSE	canonical	3	63	junction_19	214.847225621237	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	3272	False	NA	18	True	AATAAA	-14	NA	31224043	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.84	chr5	+	4911	27	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	12618	-592	1103	592	3prime_fragment	FALSE	canonical	3	560	junction_11	132.580532632571	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTGTGTGTAGAATGT	3970	False	NA	NA	False	NA	NA	NA	31224741	31236415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.86	chr5	+	4079	26	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	13317	0	1802	0	3prime_fragment	FALSE	canonical	3	560	junction_10	131.963607104383	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	4669	False	NA	18	True	AATAAA	-14	NA	31225440	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.87	chr5	+	3973	25	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	13581	0	-1995	0	3prime_fragment	FALSE	canonical	3	560	junction_9	133.797629110368	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	4933	False	NA	18	True	AATAAA	-14	NA	31225704	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.88	chr5	+	3839	26	NNC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	-1818	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	263.327580021539	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCGTCATGAGTA	5110	False	NA	16	True	AATAAA	-12	NA	31225881	31235821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31225932_31226017_31226201_31226358_31226578_31226862_31227025_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.89	chr5	+	3588	24	ISM	ENSMUSG00000013629.17	ENSMUST00000200953.4	6489	43	13748	-155	-1653	118	3prime_fragment	FALSE	canonical	3	560	junction_8	135.550156733765	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGAGAGTCTTTTCTAAC	5275	False	NA	NA	False	ACTAAA	-23	NA	31226046	31235694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.9	chr5	+	1009	8	NNC	ENSMUSG00000013622.16	novel	894	7	NA	NA	267	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.237726562924	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCGTACCTGTGCG	1325	False	NA	10	True	AATAAA	-23	NA	31206395	31211965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31206430_31206473_31206607_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ES.25687.90	chr5	+	3551	23	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	14233	14	-1343	-14	3prime_fragment	FALSE	canonical	3	560	junction_7	135.353233924736	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCAAACAGTTCCTGGT	5585	False	NA	4	True	NA	NA	NA	31226356	31235809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.91	chr5	+	4158	23	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	14233	-593	-1343	593	3prime_fragment	FALSE	canonical	3	560	junction_7	135.353233924736	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGTGTGTAGAATGTC	5585	False	NA	NA	False	NA	NA	NA	31226356	31236416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.92	chr5	+	3304	22	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	-1157	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	210.728054433125	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	5771	False	NA	18	True	AATAAA	-14	NA	31226542	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.95	chr5	+	3051	21	NNC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	217.190348542471	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCTGGTTCGTCATGA	6939	False	NA	13	True	AATAAA	-9	NA	31227710	31235818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231985_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.96	chr5	+	3046	21	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	251.151921155304	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7138	False	NA	18	True	AATAAA	-14	NA	31227909	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.97	chr5	+	3355	18	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	30	0	intron_retention	FALSE	canonical	3	560	junction_3	146.06757690953	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7157	False	NA	18	True	AATAAA	-14	NA	31227928	31235823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31228017_31229208_31229449_31229645_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.98	chr5	+	2145	15	NNC	ENSMUSG00000013629.17	novel	6489	43	NA	NA	-446	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	249.989632438089	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	8435	False	NA	17	True	AATAAA	-13	NA	31229206	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31229319_31230902_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25687.99	chr5	+	2649	18	ISM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	17520	1	-9	-1	3prime_fragment	FALSE	canonical	3	560	junction_2	144.213293591274	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCGTCATGAGTAC	8872	False	NA	17	True	AATAAA	-13	NA	31229643	31235822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ES.25688.1	chr5	+	2134	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	-116	0	-116	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350454	31356244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.10	chr5	+	2026	16	FSM	ENSMUSG00000029146.15	ENSMUST00000200730.4	2019	16	-2	-5	-2	0	multi-exon	FALSE	canonical	2	10	junction_3	132.900564332888	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350635	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.11	chr5	+	1904	15	NNC	ENSMUSG00000029146.15	novel	2018	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	104.974462394918	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTACCTTTGGTTCCCT	NA	False	NA	14	True	ATTAAA	-14	NA	31350635	31356237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353159_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.13	chr5	+	1957	15	NNC	ENSMUSG00000029146.15	novel	2018	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	103.056453718635	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350638	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31350818_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.14	chr5	+	4275	8	NIC	ENSMUSG00000029146.15	novel	2111	15	NA	NA	5	-1	intron_retention	FALSE	canonical	3	351	junction_2	25.7206341369758	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGGTTCCCTCTCAC	NA	False	NA	19	True	ATTAAA	-19	NA	31350642	31356242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
ES.25688.15	chr5	+	2113	15	NIC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	5	0	intron_retention	FALSE	canonical	2	10	junction_3	137.427995989291	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350642	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.16	chr5	+	4116	15	NNC	ENSMUSG00000029146.15	novel	2018	15	NA	NA	-5	1931	intron_retention	FALSE	non_canonical	0	0	junction_7	104.843153017705	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTTTTTTGTAAGCTC	NA	False	NA	NA	False	TATAAA	-7	NA	31350644	31358418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353607_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.17	chr5	+	1925	16	NNC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	156.109989715229	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350646	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31350720_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.18	chr5	+	1972	15	NNC	ENSMUSG00000029146.15	novel	2018	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	139.004349513508	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350649	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31350818_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353798_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.19	chr5	+	1745	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	88	185	9	-179	multi-exon	FALSE	canonical	3	351	junction_8	24.4791664857432	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGGCTACTTGC	NA	False	NA	NA	False	NA	NA	NA	31350658	31356059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.2	chr5	+	2941	13	NIC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	-67	0	intron_retention	FALSE	canonical	2	10	junction_3	147.944316664525	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350503	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.20	chr5	+	2215	15	FSM	ENSMUSG00000029146.15	ENSMUST00000202032.4	2111	15	-348	244	171	0	multi-exon	FALSE	canonical	2	10	junction_2	136.066535345089	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350849	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.21	chr5	+	1836	14	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	584	1	-43	0	3prime_fragment	FALSE	canonical	3	351	junction_7	24.4748391512445	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31351154	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.3	chr5	+	2144	14	NIC	ENSMUSG00000029146.15	novel	2018	15	NA	NA	7	-1	intron_retention	FALSE	canonical	3	351	junction_7	23.1478397524931	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGGTTCCCTCTCAC	NA	False	NA	19	True	ATTAAA	-19	NA	31350577	31356242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.4	chr5	+	2583	14	NIC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	5	0	intron_retention	FALSE	canonical	2	10	junction_3	141.458547674077	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350590	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
ES.25688.6	chr5	+	2058	14	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	39	1	24	0	intron_retention	FALSE	canonical	3	351	junction_8	24.9475188791361	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350609	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
ES.25688.7	chr5	+	2129	15	ISM	ENSMUSG00000029146.15	ENSMUST00000200730.4	2019	16	-25	-5	-25	0	intron_retention	FALSE	canonical	2	10	junction_3	136.340678494149	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350612	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579
ES.25688.8	chr5	+	3763	14	NIC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	-12	1056	intron_retention	FALSE	canonical	3	351	junction_7	24.4975545211107	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATGTCCCAAGATGCC	NA	False	NA	NA	False	NA	NA	NA	31350625	31357543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25688.9	chr5	+	2064	16	NIC	ENSMUSG00000029146.15	novel	2019	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	158.271861751299	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	False	NA	20	True	ATTAAA	-20	NA	31350635	31356243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353424_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ES.25689.1	chr5	-	176	2	Antisense	novelGene_ENSMUSG00000013629.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31225399	31179385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31179513_31225350
ES.25689.10	chr5	-	3959	16	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	63	junction_15	22.5867217630182	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	797	False	NA	-1	True	AATAAA	-19	NA	31205359	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197836_31198001_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.11	chr5	-	3184	19	NNC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	40.1371106872554	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	810	False	NA	-1	True	AATAAA	-19	NA	31205346	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204022_31204125_31204973_31205144_31205309
ES.25689.12	chr5	-	3080	18	NNC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	32.1922211154499	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	711	False	NA	-1	True	AATAAA	-19	NA	31205445	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205410
ES.25689.13	chr5	-	3942	17	NNC	ENSMUSG00000006641.13	novel	3248	17	NA	NA	-33	0	intron_retention	TRUE	non_canonical	0	0	junction_7	41.8014279062331	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	770	False	NA	-1	True	AATAAA	-19	NA	31205386	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31197005_31197041_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205145_31205309
ES.25689.14	chr5	-	4820	3	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	1569	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	7776	False	NA	-2	True	AATAAA	-18	NA	31198380	31193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31195929_31196071_31197005_31197041
ES.25689.15	chr5	-	3158	18	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.4165150783823	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	739	False	NA	-2	True	AATAAA	-18	NA	31205417	31193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194746_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.16	chr5	-	3298	19	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.2770114869635	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	803	False	NA	-2	True	AATAAA	-18	NA	31205353	31193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197409_31197620_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.17	chr5	-	3243	19	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	40.0045136342277	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	790	False	NA	-2	True	AATAAA	-18	NA	31205366	31193380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204422_31204565_31204973_31205144_31205309
ES.25689.19	chr5	-	4290	16	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	32	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	34.9370227059427	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTGGCCTCTGTGTTC	765	False	NA	-3	True	AATAAA	-17	NA	31205391	31193381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31197030_31197065_31197836_31198001_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.2	chr5	-	177	1	Intergenic	novelGene_21374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	572	False	NA	NA	False	NA	NA	NA	31179562	31179385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31179400_31179600
ES.25689.20	chr5	-	3056	17	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	33.869003159231	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGGCCTCTGTGTT	781	False	NA	-4	True	AATAAA	-16	NA	31205375	31193382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199548_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.21	chr5	-	3120	18	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.7869367274633	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCTGGCCTCTGTGTT	751	False	NA	-4	True	AATAAA	-16	NA	31205405	31193382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196336_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.22	chr5	-	6681	16	NIC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	30	-4	intron_retention	FALSE	canonical	3	63	junction_15	23.3479953933713	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCTGGCCTCTGTG	763	False	NA	-6	True	AATAAA	-14	NA	31205393	31193384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31205144_31205309
ES.25689.23	chr5	-	3111	18	NNC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.3827670006119	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCTGGCCTCTGT	781	False	NA	-7	True	AATAAA	-13	NA	31205375	31193385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205303
ES.25689.24	chr5	-	2621	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	320	495	-163	356	multi-exon	FALSE	canonical	3	19	junction_17	28.8754634169437	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGCATTTGATTAAGTG	570	False	NA	NA	False	AATAAA	-18	NA	31205586	31193874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
ES.25689.25	chr5	-	2739	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	-16	495	-16	356	multi-exon	FALSE	canonical	2	5	junction_17	31.4360998487793	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGCATTTGATTAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	31206284	31193874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
ES.25689.26	chr5	-	2644	18	NIC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	16	352	combination_of_known_junctions	FALSE	canonical	3	63	junction_17	22.1293773649543	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTGGCATTTGATTA	749	False	NA	NA	False	AATAAA	-14	NA	31205407	31193878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.28	chr5	-	3020	1	Antisense	novelGene_ENSMUSG00000013629.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCGGTGGTGGCGCA	3688	False	NA	NA	False	GATAAA	-18	NA	31216871	31213851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31213900_31216900
ES.25689.3	chr5	-	2664	19	NNC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	10	8217	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	32.9120132669509	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACTAACTTCTTAGTAAA	743	False	NA	NA	False	NA	NA	NA	31205413	31185162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31185173_31193874_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.4	chr5	-	156	1	Intergenic	novelGene_21376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	7716	False	NA	NA	False	NA	NA	NA	31185403	31185247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31185200_31185400
ES.25689.5	chr5	-	3234	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	-16	0	-16	0	multi-exon	FALSE	canonical	2	5	junction_17	31.4360998487793	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	31206284	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
ES.25689.6	chr5	-	3166	18	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_17	22.1293773649543	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	726	False	NA	-1	True	AATAAA	-19	NA	31205430	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.7	chr5	-	3024	17	NIC	ENSMUSG00000006641.13	novel	3436	18	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	34.5414153589571	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	781	False	NA	-1	True	AATAAA	-19	NA	31205375	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
ES.25689.8	chr5	-	3345	16	NIC	ENSMUSG00000006641.13	novel	3248	17	NA	NA	248	0	intron_retention	FALSE	canonical	3	71	junction_12	19.3432158650003	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	1058	False	NA	-1	True	AATAAA	-19	NA	31205098	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973
ES.25689.9	chr5	-	3136	18	FSM	ENSMUSG00000006641.13	ENSMUST00000114668.7	3436	18	300	0	-183	0	multi-exon	FALSE	canonical	3	19	junction_17	28.8754634169437	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	550	False	NA	-1	True	AATAAA	-19	NA	31205606	31193379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205515
ES.2569.1	chr10	-	830	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	277	-13	277	13	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTGAGACTTAATTCT	NA	False	NA	NA	False	AATAAA	-30	NA	34003703	34002049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34002563_34003386
ES.25690.1	chr5	-	2028	9	FSM	ENSMUSG00000029151.15	ENSMUST00000202740.4	1989	9	-40	1	-40	-1	multi-exon	FALSE	canonical	0	0	junction_7	11.1551557586616	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCAGTCCAATTCCT	NA	False	NA	-1	True	AATAAA	-18	NA	31265621	31243450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31251827_31251901_31265401
ES.25690.2	chr5	-	2007	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	80	2	-66	-2	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGCAGTCCAATTCC	3824	False	NA	-2	True	AATAAA	-17	NA	31250879	31243451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
ES.25690.3	chr5	-	6150	3	ISM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	107	2	-39	-2	intron_retention	FALSE	canonical	3	24	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGCAGTCCAATTCC	3851	False	NA	-2	True	AATAAA	-17	NA	31250852	31243451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31244263_31245300_31245436_31245648
ES.25691.1	chr5	-	282	1	Intergenic	novelGene_21381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACCAAAAGATGACAA	NA	False	NA	NA	False	NA	NA	NA	31275712	31275430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31275400_31275700
ES.25691.2	chr5	-	178	1	Intergenic	novelGene_21382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	31275710	31275532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31275500_31275700
ES.25692.1	chr5	-	4440	27	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	6	0	multi-exon	TRUE	canonical	2	5	junction_8	179.462762533331	979	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTAGCAGTTTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	31337247	31297997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.10	chr5	-	1672	8	NIC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	-11	-6	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	134.447015586066	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	31311583	31298012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302910_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ES.25692.102	chr5	-	3985	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-1	-86	intron_retention	FALSE	canonical	3	18	junction_17	168.950500052956	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337256	31313950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331293_31331410_31331434_31331575_31331840_31337227
ES.25692.103	chr5	-	3962	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	19	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	151.958896326735	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337234	31313950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336961
ES.25692.104	chr5	-	3982	19	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	-86	intron_retention	FALSE	canonical	2	13	junction_1	172.256448212011	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337252	31313950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314995_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
ES.25692.106	chr5	-	3579	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	2	-86	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	151.540199613058	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337251	31313950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331706_31337227
ES.25692.107	chr5	-	4783	16	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	114	-88	intron_retention	FALSE	canonical	3	503	junction_14	48.7872478784729	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCTTTTACAAGTCA	NA	False	NA	-22	True	NA	NA	NA	31332051	31313952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31331434_31331575
ES.25692.108	chr5	-	3680	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	-88	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	158.149649789037	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCTTTTACAAGTCA	NA	False	NA	-22	True	NA	NA	NA	31337253	31313952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315807_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.109	chr5	-	3918	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	2	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.927881670583	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCTTTTACAAGTCA	NA	False	NA	-22	True	NA	NA	NA	31337459	31313952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323381_31325035_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.11	chr5	-	1651	7	FSM	ENSMUSG00000107283.4	ENSMUST00000200744.4	1653	7	-4	6	2	-6	multi-exon	FALSE	canonical	3	7	junction_2	140.104722737434	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	31311570	31298012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ES.25692.111	chr5	-	3590	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	2	-90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	200.557475647412	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCATTCTTTTACAAGT	NA	False	NA	-24	True	NA	NA	NA	31337251	31313954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314995_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31325015_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.112	chr5	-	3720	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	568	-90	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCATTCTTTTACAAGT	NA	False	NA	-24	True	NA	NA	NA	31336625	31313954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.114	chr5	-	3888	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	58	606	31	-90	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCATTCTTTTACAAGT	NA	False	NA	-24	True	NA	NA	NA	31337430	31313954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.116	chr5	-	3598	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	208	746	-25	-230	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGTATACCTCTCTTA	NA	False	NA	NA	False	AGTAAA	-33	NA	31337280	31314094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.117	chr5	-	3931	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	-232	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTATACCTCTCT	NA	False	NA	NA	False	AGTAAA	-31	NA	31337486	31314096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.118	chr5	-	4300	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	20	-247	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	181.770090089017	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTCTTTATATCAAGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	31337233	31314111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336590
ES.25692.119	chr5	-	3551	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.927881670583	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTCTTTATATCAAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	31337252	31314112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323381_31325035_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.12	chr5	-	1756	8	FSM	ENSMUSG00000107283.4	ENSMUST00000200864.4	878	8	-6	-872	-5	-6	multi-exon	FALSE	canonical	3	9	junction_7	132.664376283514	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	31311542	31298012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311434
ES.25692.121	chr5	-	3758	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	25	-257	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	147.57426462716	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGATCTTCTTT	NA	False	NA	NA	False	AGTAAA	-6	NA	31337228	31314121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.122	chr5	-	3855	18	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-290	intron_retention	FALSE	canonical	3	356	junction_17	85.0569115398157	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337252	31314154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.123	chr5	-	3769	18	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	1653	-293	intron_retention	FALSE	canonical	1	1	junction_17	155.219478497998	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31335540	31314157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31335431
ES.25692.124	chr5	-	3915	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-20	-293	intron_retention	FALSE	canonical	3	214	junction_16	116.119258087388	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337275	31314157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
ES.25692.125	chr5	-	4816	18	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-293	intron_retention	FALSE	canonical	3	356	junction_17	84.0077439172264	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337252	31314157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.126	chr5	-	3579	19	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	5	-293	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	190.929443693569	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31331840	31314157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315807_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575
ES.25692.127	chr5	-	3285	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-9	-293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.979707388106	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31337497	31314157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314746_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.128	chr5	-	3136	20	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	155.625464878212	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGATGGTAGGGACAGTA	NA	False	NA	NA	False	NA	NA	NA	31337252	31314435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330228_31330320_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.129	chr5	-	3417	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	-6	1141	-6	298	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCGATGTTATTGCCT	NA	False	NA	62	True	NA	NA	NA	31337494	31314489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.13	chr5	-	1737	8	FSM	ENSMUSG00000107283.4	ENSMUST00000201353.4	846	8	-44	-847	-3	-6	multi-exon	FALSE	canonical	0	0	junction_7	135.765403906736	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	31311540	31298012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311451
ES.25692.130	chr5	-	3479	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-1	236	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337489	31314551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.131	chr5	-	3727	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	24	236	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337229	31314551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.132	chr5	-	3836	18	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-14	236	intron_retention	FALSE	canonical	3	356	junction_17	76.9143684184181	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337269	31314551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31331434_31331575_31331840_31337227
ES.25692.133	chr5	-	3330	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	22	235	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	147.57426462716	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337231	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.134	chr5	-	3473	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	20	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	218.740957866147	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337233	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316862_31317027_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336988
ES.25692.135	chr5	-	3859	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	20	235	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	181.770090089017	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337233	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336590
ES.25692.137	chr5	-	2996	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	235	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	155.41347678188	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337253	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314995_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.138	chr5	-	2642	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.981085569663	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337252	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316532_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.14	chr5	-	1723	7	NIC	ENSMUSG00000107283.4	novel	878	8	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	176.07826542636	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	False	NA	NA	False	NA	NA	NA	31311542	31298012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311434
ES.25692.140	chr5	-	8473	18	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	263	1204	28	235	3prime_fragment	FALSE	canonical	3	433	junction_16	63.3729554927753	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337225	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.142	chr5	-	3250	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	171.959071984217	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337252	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331102_31331434_31331575_31331840_31337227
ES.25692.144	chr5	-	3212	18	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	8	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	193.086243885614	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31331837	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31325015_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575
ES.25692.145	chr5	-	3528	18	ISM	ENSMUSG00000101678.4	ENSMUST00000101411.6	3223	21	-38	6067	-38	-6067	5prime_fragment	FALSE	canonical	3	356	junction_17	84.7556634765458	814	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337293	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.146	chr5	-	3296	18	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	0	235	intron_retention	FALSE	canonical	3	38	junction_10	155.772836112681	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337253	31314552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.15	chr5	-	1899	8	NNC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	135.765403906736	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31311527	31298013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311275
ES.25692.150	chr5	-	9197	17	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	14	234	intron_retention	FALSE	canonical	3	38	junction_11	148.237444135245	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGAGTGGGTGTTTG	NA	False	NA	-2	True	AGTAAA	-22	NA	31337239	31314553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31331434_31331575
ES.25692.151	chr5	-	3995	17	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	1	234	intron_retention	FALSE	canonical	3	356	junction_16	78.640002543235	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTGAGTGGGTGTTTG	NA	False	NA	-2	True	AGTAAA	-22	NA	31337252	31314553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31331434_31331575_31331840_31337227
ES.25692.152	chr5	-	3085	17	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	5	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	157.17803152397	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31331840	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323381_31325035_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.153	chr5	-	3624	7	ISM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	17743	690	-2993	233	3prime_fragment	FALSE	canonical	3	609	junction_2	19.4992877362796	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31319718	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291
ES.25692.154	chr5	-	3416	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	233	intron_retention	FALSE	canonical	3	165	junction_16	148.883426516715	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337251	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.155	chr5	-	2997	20	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	567	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	223.245402405718	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31336626	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327613_31330125_31330406_31331111_31331293_31331410_31331434_31331575_31331840_31336590
ES.25692.157	chr5	-	3495	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	233	intron_retention	FALSE	canonical	3	214	junction_16	116.119258087388	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337252	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
ES.25692.158	chr5	-	4439	18	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-17	233	intron_retention	FALSE	canonical	3	356	junction_17	84.0077439172264	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337272	31314554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.159	chr5	-	3530	17	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	2	232	intron_retention	FALSE	canonical	3	356	junction_16	88.0794208371059	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337251	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.16	chr5	-	4907	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	19	-7	multi-exon	FALSE	canonical	0	0	junction_8	184.381369991656	979	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31337234	31298013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311623_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.160	chr5	-	3202	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-15	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.236536923402	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337270	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325224_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.161	chr5	-	3282	18	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	1	232	intron_retention	FALSE	canonical	0	0	junction_13	203.293436818032	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337252	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327248_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.163	chr5	-	3120	21	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	232	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_18	184.896322299823	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337252	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331293_31331410_31331434_31331575_31331840_31337227
ES.25692.164	chr5	-	9381	16	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	232	intron_retention	FALSE	canonical	3	503	junction_14	48.7872478784729	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337252	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31331434_31331575
ES.25692.165	chr5	-	4455	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-1912	232	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	223.397897256476	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31334077	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331410_31331434_31331575_31332418_31333171
ES.25692.166	chr5	-	3566	21	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	20	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	217.510522733959	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337233	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31335431_31335540_31336988
ES.25692.167	chr5	-	3102	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	6	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.927881670583	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337247	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31325015_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.168	chr5	-	3247	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	192.254923678616	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337251	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326504_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.169	chr5	-	3126	18	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	5	232	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	195.839740993112	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31331840	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575
ES.25692.170	chr5	-	3351	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	25	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	151.958896326735	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337228	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336961
ES.25692.171	chr5	-	2941	18	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	232	intron_retention	FALSE	non_canonical	0	0	junction_1	228.185440279851	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337252	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314747_31315686_31315840_31316404_31316532_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.172	chr5	-	2913	15	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	-256	232	intron_retention	FALSE	canonical	0	0	junction_14	165.885871758205	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTGAGTGGGTGTT	NA	False	NA	-4	True	AGTAAA	-20	NA	31337744	31314555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31337227
ES.25692.173	chr5	-	3632	17	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	0	231	intron_retention	FALSE	canonical	3	356	junction_16	86.632823420168	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTGTGAGTGGGTGT	NA	False	NA	-5	True	AGTAAA	-19	NA	31337253	31314556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.174	chr5	-	3082	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	231	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	158.889860136892	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTGTGAGTGGGTGT	NA	False	NA	-5	True	AGTAAA	-19	NA	31337252	31314556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315569_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.175	chr5	-	4386	13	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	318	231	intron_retention	FALSE	canonical	3	503	junction_12	52.2977586092899	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTGTGAGTGGGTGT	NA	False	NA	-5	True	AGTAAA	-19	NA	31331527	31314556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291_31317437_31323229_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125
ES.25692.176	chr5	-	5313	16	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	-420	230	intron_retention	FALSE	canonical	1	3	junction_4	161.547846369633	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTTGTGAGTGGGTG	NA	False	NA	-6	True	AGTAAA	-18	NA	31332585	31314557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316532_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.177	chr5	-	3676	5	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	-2626	230	intron_retention	FALSE	canonical	3	609	junction_2	21.083168642308	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTTGTGAGTGGGTG	NA	False	NA	-6	True	AGTAAA	-18	NA	31319351	31314557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291
ES.25692.178	chr5	-	3017	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-15	230	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	159.279715525166	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTTGTGAGTGGGTG	NA	False	NA	-6	True	AGTAAA	-18	NA	31337270	31314557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316426_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.18	chr5	-	4145	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	1	-7	multi-exon	FALSE	canonical	0	0	junction_24	188.605196110818	979	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31337252	31298013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331589_31331840_31337227
ES.25692.181	chr5	-	3153	18	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	0	226	intron_retention	FALSE	canonical	1	2	junction_17	199.141757164003	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGAGCACTTGTGAGTG	NA	False	NA	-10	True	AGTAAA	-14	NA	31337253	31314561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331706_31337227
ES.25692.182	chr5	-	3042	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	237	1273	2	166	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCTCATATTGAGCAT	NA	False	NA	-70	True	AAGAAA	-30	NA	31337251	31314621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.183	chr5	-	2001	14	ISM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	224	3769	1	-279	5prime_fragment	FALSE	canonical	3	356	junction_13	93.0300581316401	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTACAGAGCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	31337252	31317117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.184	chr5	-	2618	14	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	20	-280	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	162.339880147764	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGAGTACAGAGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	31337233	31317118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.185	chr5	-	2781	12	ISM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	223	8869	0	2257	5prime_fragment	FALSE	canonical	3	356	junction_11	96.3072733966179	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAGAAGTTACTATCAA	NA	False	NA	NA	False	NA	NA	NA	31337253	31322217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.186	chr5	-	3342	11	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	24	2206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.018229353298	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCTGTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	31337229	31322268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31323381_31325035_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.187	chr5	-	2203	10	ISM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	223	11101	0	25	5prime_fragment	FALSE	canonical	3	356	junction_9	91.6878763341515	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCTAATGTGTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	31337253	31324449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.188	chr5	-	1166	1	NIC	ENSMUSG00000101678.4	novel	3223	21	NA	NA	-10118	-15964	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	771	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCTAATGTGTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	31325615	31324449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31324400_31325600
ES.25692.19	chr5	-	1690	8	NNC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.409281326605	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCAAACAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	31311583	31298013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31299195_31302049_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ES.25692.2	chr5	-	4517	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	3	4	multi-exon	FALSE	canonical	2	5	junction_8	162.264406448241	979	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTGTGTCTTTAGCAG	NA	False	NA	NA	False	TTTAAA	-8	NA	31337458	31298002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.20	chr5	-	3469	25	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	5	-19	multi-exon	FALSE	canonical	2	5	junction_8	162.819637559479	974	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGGAGTGTGTCAG	NA	False	NA	-8	True	NA	NA	NA	31331840	31298820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.21	chr5	-	3681	26	Fusion	ENSMUSG00000101678.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	0	471	multi-exon	FALSE	canonical	2	5	junction_7	182.324747634544	974	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGTGCAGTGATTAAGA	NA	False	NA	NA	False	NA	NA	NA	31337253	31301611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.22	chr5	-	2903	1	NIC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	105	-5869	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCCTTCCTATGATCA	NA	False	NA	NA	False	AATAAA	-18	NA	31311391	31308488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31308500_31311400
ES.25692.23	chr5	-	5313	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	223	-984	-10	984	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCCGGGTGTGGTGGCG	NA	False	NA	NA	False	AATATA	-29	NA	31337265	31312364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.24	chr5	-	6137	18	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-164	973	intron_retention	FALSE	canonical	1	3	junction_4	174.089544631988	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACATGACTAGAAGCCGG	NA	False	NA	NA	False	AATATA	-18	NA	31332329	31312375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316532_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575
ES.25692.25	chr5	-	5173	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	223	-844	-10	844	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGACGTATACATCT	NA	False	NA	NA	False	NA	NA	NA	31337265	31312504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.26	chr5	-	4997	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	221	-666	-12	666	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACTCCCTTATTAT	NA	False	NA	NA	False	AAAACA	-16	NA	31337267	31312682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.27	chr5	-	4839	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	236	-523	1	523	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGTTTGGGGTGCTTTT	NA	False	NA	NA	False	GATAAA	-16	NA	31337252	31312825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.28	chr5	-	5445	18	ISM	ENSMUSG00000101678.4	ENSMUST00000101411.6	3223	21	-231	4343	-231	-4343	5prime_fragment	FALSE	canonical	3	356	junction_17	84.7556634765458	821	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCGGTTTGGGGTGCT	NA	False	NA	NA	False	GATAAA	-13	NA	31337486	31312828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.29	chr5	-	4574	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	-17	-5	-17	5	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTGTCCTGCAGAG	NA	False	NA	-21	True	AATAAA	-24	NA	31337505	31313343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.3	chr5	-	4298	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	1	3	multi-exon	FALSE	canonical	0	0	junction_8	162.877946941874	979	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATTGTGTCTTTAGCA	NA	False	NA	NA	False	TTTAAA	-7	NA	31337252	31298003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311623_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.30	chr5	-	4786	18	NNC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	20	4	intron_retention	FALSE	canonical	2	5	junction_7	199.063117044504	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCTTGTCCTGCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	31337233	31313344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323636_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.31	chr5	-	6125	18	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	3819	-4	-1504	4	3prime_fragment	FALSE	canonical	3	433	junction_16	63.3729554927753	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCTTGTCCTGCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	31333669	31313344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.32	chr5	-	4948	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCTTGTCCTGCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	31337243	31313344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.33	chr5	-	4558	21	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_18	184.896322299823	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTGGCTTGTCCTGCA	NA	False	NA	-24	True	AATAAA	-21	NA	31337481	31313346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331293_31331410_31331434_31331575_31331840_31337227
ES.25692.34	chr5	-	4702	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	214	junction_16	116.119258087388	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337253	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
ES.25692.35	chr5	-	4687	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337494	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.36	chr5	-	4729	18	FSM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	-11	0	1	0	multi-exon	FALSE	canonical	3	356	junction_17	85.762849975885	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337487	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.39	chr5	-	10090	18	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	214	junction_16	105.550132400803	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337253	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575
ES.25692.4	chr5	-	4521	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	29	3	multi-exon	FALSE	canonical	2	5	junction_8	185.832595633812	979	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATTGTGTCTTTAGCA	NA	False	NA	NA	False	TTTAAA	-7	NA	31337224	31298003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.40	chr5	-	4092	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.979707388106	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337496	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.41	chr5	-	4029	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	159.804133585809	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337281	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331262_31331719_31331840_31337227
ES.25692.42	chr5	-	3977	19	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.805816332855	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337252	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.43	chr5	-	5116	7	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	-2083	0	intron_retention	FALSE	canonical	3	609	junction_2	19.7940788003775	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31325559	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291_31317437_31323229_31325149_31325332
ES.25692.44	chr5	-	4541	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	171.959071984217	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337252	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331015_31331434_31331575_31331840_31337227
ES.25692.45	chr5	-	4462	18	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.519619278693	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337229	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.46	chr5	-	4534	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197.14430385687	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337233	31313348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315593_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.48	chr5	-	6089	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	199.443709376547	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337232	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316532_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31335431
ES.25692.49	chr5	-	4623	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	165	junction_16	148.883426516715	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337253	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.5	chr5	-	3772	24	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	1724	8	NA	NA	1031	0	multi-exon	FALSE	canonical	0	0	junction_8	175.970503629012	977	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31330814	31298006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311623_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726
ES.25692.50	chr5	-	4390	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.236536923402	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337252	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325224_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.52	chr5	-	5292	13	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	839	-1	intron_retention	FALSE	canonical	3	503	junction_12	52.948809135701	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31331006	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125
ES.25692.53	chr5	-	4173	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_17	148.199023671831	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31331840	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331410_31331434_31331575
ES.25692.55	chr5	-	5061	13	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	850	-1	intron_retention	FALSE	canonical	3	503	junction_12	52.2977586092899	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31330995	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291_31317437_31323229_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125
ES.25692.56	chr5	-	4316	18	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	108	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	193.086243885614	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31331737	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323381_31325035_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575
ES.25692.59	chr5	-	4380	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.499165209802	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337251	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315593_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323636_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.6	chr5	-	1313	3	NIC	ENSMUSG00000107283.4	novel	1653	7	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	116.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31311584	31298006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31299195_31311011_31311087_31311534
ES.25692.60	chr5	-	4248	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	158.722844474337	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337252	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317110_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.61	chr5	-	4274	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	158.149649789037	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337244	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315807_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.62	chr5	-	9345	18	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	195.240141371512	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337233	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575
ES.25692.63	chr5	-	3993	18	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	161.13850991356	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337252	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331575_31331840_31337227
ES.25692.64	chr5	-	4411	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	190.0374799015	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGGCTTGTCCT	NA	False	NA	-27	True	AATAAA	-18	NA	31337252	31313349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315807_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.65	chr5	-	4580	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	-2	intron_retention	FALSE	canonical	3	18	junction_17	168.950500052956	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGAGCTTGGCTTGTCC	NA	False	NA	-28	True	AATAAA	-17	NA	31337251	31313350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331293_31331410_31331434_31331575_31331840_31337227
ES.25692.66	chr5	-	4290	17	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	157.17803152397	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGAGCTTGGCTTGTCC	NA	False	NA	-28	True	AATAAA	-17	NA	31331840	31313350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323365_31325018_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.69	chr5	-	4181	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	157.711057880473	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	-29	True	AATAAA	-16	NA	31337252	31313351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325691_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.70	chr5	-	4185	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_17	158.055194297576	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGGCTTGTC	NA	False	NA	-29	True	AATAAA	-16	NA	31337265	31313351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331575_31331840_31337227
ES.25692.71	chr5	-	5472	17	ISM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	4628	6	-683	-6	3prime_fragment	FALSE	canonical	3	433	junction_15	64.7144871242135	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGAGGAGCTTGGCTT	NA	False	NA	-32	True	AATAAA	-13	NA	31332848	31313354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575
ES.25692.72	chr5	-	3802	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	221.529848291851	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTCCTCTGTGGATA	NA	False	NA	98	True	NA	NA	NA	31337253	31313832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315569_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331706_31337227
ES.25692.73	chr5	-	4180	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATTGTTCGCTCAAT	NA	False	NA	81	True	ATTAAA	-39	NA	31337488	31313849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.74	chr5	-	4430	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	20	12	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAATGTATTGTTCGCTC	NA	False	NA	78	True	ATTAAA	-36	NA	31337233	31313852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
ES.25692.75	chr5	-	4045	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	2	505	2	11	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATAATGTATTGTTCGCT	NA	False	NA	77	True	ATTAAA	-35	NA	31337486	31313853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.77	chr5	-	3896	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	190.0374799015	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAGAACCCAATAATG	NA	False	NA	66	True	ATTAAA	-24	NA	31337252	31313864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315807_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.78	chr5	-	3976	18	FSM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	223	519	0	-3	multi-exon	FALSE	canonical	3	356	junction_17	85.762849975885	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATTTAGAACCCAATA	NA	False	NA	63	True	ATTAAA	-21	NA	31337253	31313867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.79	chr5	-	4181	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-5	intron_retention	FALSE	canonical	3	214	junction_16	116.119258087388	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTATTTAGAACCCAA	NA	False	NA	61	True	ATTAAA	-19	NA	31337253	31313869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
ES.25692.8	chr5	-	1763	7	NIC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	10	-2	intron_retention	FALSE	canonical	3	233	junction_6	60.8698520524643	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAAGAATTGTGTCTT	NA	False	NA	NA	False	TTTAAA	-2	NA	31311552	31298008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31303121_31303316_31303433_31311011_31311087_31311534
ES.25692.80	chr5	-	6920	6	ISM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	15324	522	1324	-6	3prime_fragment	FALSE	canonical	3	609	junction_2	21.3447885911292	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAGTATTTAGAACCCA	NA	False	NA	60	True	ATTAAA	-18	NA	31322152	31313870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291
ES.25692.81	chr5	-	2849	13	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	187.84228017734	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAGTATTTAGAACCCA	NA	False	NA	60	True	ATTAAA	-18	NA	31337252	31313870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325096_31331111_31331434_31331575_31331840_31337227
ES.25692.82	chr5	-	4105	19	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	-6	intron_retention	FALSE	canonical	1	3	junction_4	222.675101026774	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAGTATTTAGAACCCA	NA	False	NA	60	True	ATTAAA	-18	NA	31337253	31313870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316532_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325589_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.88	chr5	-	4147	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	14	-8	combination_of_known_junctions	FALSE	canonical	3	21	junction_19	184.702290965999	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31337239	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336988
ES.25692.89	chr5	-	4013	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	19	-8	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	147.57426462716	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31337234	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
ES.25692.9	chr5	-	1872	7	NIC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	4	-2	intron_retention	FALSE	canonical	3	233	junction_6	60.0712539868743	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAAGAATTGTGTCTT	NA	False	NA	NA	False	TTTAAA	-2	NA	31311558	31298008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303433_31311011_31311087_31311534
ES.25692.90	chr5	-	4540	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	181.770090089017	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31337234	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336590
ES.25692.92	chr5	-	3785	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	158.889860136892	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31337271	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315569_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.93	chr5	-	3238	17	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	1043	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	179.740742112077	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31330802	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317418_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726
ES.25692.94	chr5	-	3860	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	157.193018489144	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31337252	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323636_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ES.25692.95	chr5	-	5219	5	NIC	ENSMUSG00000106864.4	novel	4718	18	NA	NA	3267	-8	intron_retention	FALSE	canonical	3	609	junction_2	21.083168642308	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAGTATTTAGAACC	NA	False	NA	58	True	ATTAAA	-16	NA	31320209	31313872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31317206_31317291
ES.25692.96	chr5	-	3673	20	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_17	152.222846556785	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAGAAAGTATTTAGAA	NA	False	NA	56	True	ATTAAA	-14	NA	31337253	31313874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331410_31331434_31331575_31331840_31337227
ES.25692.97	chr5	-	3384	19	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	-3	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.805816332855	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTACAAGTCATGATT	NA	False	NA	-17	True	NA	NA	NA	31337258	31313947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31314745_31315679_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25692.99	chr5	-	4077	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	2	-86	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337486	31313950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
ES.25693.1	chr5	-	1777	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	103	-2	-22	1	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCCTTTGTATCTTT	NA	False	NA	1	True	AATAAA	-25	NA	31350380	31344900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
ES.25693.10	chr5	-	1592	13	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	181.197923553224	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350447	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347320_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.11	chr5	-	1658	13	NNC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	182.542746135437	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350423	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348498_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.12	chr5	-	2017	11	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	28	0	intron_retention	FALSE	canonical	3	556	junction_3	59.6167761624193	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350455	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.13	chr5	-	1908	2	ISM	ENSMUSG00000029145.13	ENSMUST00000200724.2	768	6	2059	-1	328	0	intron_retention	FALSE	canonical	3	730	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31346932	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31345145_31345257
ES.25693.14	chr5	-	1823	12	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-22	0	intron_retention	FALSE	canonical	1	3	junction_3	189.719627846153	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350380	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347219_31347353_31347702_31347806_31347925_31348003_31348180_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.15	chr5	-	1604	13	NNC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.955546259909	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350427	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31345145_31345257_31345375_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.16	chr5	-	2053	10	NIC	ENSMUSG00000029145.13	novel	1966	12	NA	NA	273	0	intron_retention	FALSE	canonical	3	556	junction_3	59.6789765907022	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350070	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
ES.25693.18	chr5	-	1753	12	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-35	0	intron_retention	FALSE	canonical	3	556	junction_3	58.0736209870321	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCATGACTCTGCTGC	NA	False	NA	-11	True	AATAAA	-13	NA	31350393	31344912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.2	chr5	-	1903	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	119	3	107	-2	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCTGCCTTTGTAT	NA	False	NA	-3	True	AATAAA	-21	NA	31350655	31344904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.20	chr5	-	1760	12	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	26	junction_6	183.353742916043	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCCCATGACTCTGCTG	NA	False	NA	-12	True	AATAAA	-12	NA	31350369	31344913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348270_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.21	chr5	-	850	7	NNC	ENSMUSG00000029145.13	novel	1966	12	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	300.308961275254	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTCCCATGACTCTGCT	NA	False	NA	-13	True	AATAAA	-11	NA	31348259	31344914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31345145_31345257_31345375_31346912_31347091_31347286_31347353_31347702_31347806_31347925_31348003_31348180
ES.25693.4	chr5	-	2205	12	NIC	ENSMUSG00000029145.13	novel	1878	13	NA	NA	-56	0	intron_retention	FALSE	canonical	3	32	junction_11	181.012989808298	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350414	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349633_31349925_31350115_31350336
ES.25693.6	chr5	-	1435	12	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	188.205927309371	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350401	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31349496_31349633_31349925_31349970_31350336
ES.25693.7	chr5	-	1593	13	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_7	175.710679970102	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350378	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348270_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ES.25693.8	chr5	-	1934	12	NIC	ENSMUSG00000029145.13	novel	2025	13	NA	NA	-42	0	intron_retention	FALSE	canonical	3	556	junction_3	47.686129452376	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350400	31344911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349970_31350336
ES.25694.1	chr5	-	5849	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	44	-3665	-34	3665	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACGGTGGCCTGCCACAC	NA	False	NA	NA	False	NA	NA	NA	31359603	31352659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
ES.25694.10	chr5	-	1974	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	16	junction_3	82.6935440177903	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359683	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359619
ES.25694.11	chr5	-	4537	13	Fusion	ENSMUSG00000043059.17_ENSMUSG00000029147.12	novel	2307	10	NA	NA	-58	-1	intron_retention	FALSE	canonical	1	1	junction_3	228.566729862419	578	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31377967	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31357492_31357578_31358167_31358926_31359083_31359627_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.13	chr5	-	1845	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-19	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	87.9406365428154	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359588	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357169_31357578_31358167_31358926_31359083_31359330
ES.25694.14	chr5	-	2093	5	NIC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_1	82.5692890849861	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359625	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31357203_31357314_31357492_31357578_31358167_31358926_31359083_31359330
ES.25694.15	chr5	-	2131	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-32	-1	intron_retention	FALSE	canonical	0	0	junction_2	91.2907443282176	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCATGTCTCTGCTGAA	NA	False	NA	-20	True	AATAAA	-13	NA	31359601	31356327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357492_31357578_31358167_31358974_31359083_31359330
ES.25694.16	chr5	-	2167	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	87.9406365428154	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCATGTCTCTGCTGAA	NA	False	NA	-20	True	AATAAA	-13	NA	31359580	31356327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357501_31357578_31358167_31358926_31359083_31359330
ES.25694.19	chr5	-	2089	5	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	81.704880515181	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGCCATGTCTCTGCT	NA	False	NA	-23	True	AATAAA	-10	NA	31359620	31356330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357492_31357578_31357890_31357995_31358167_31358926_31359083_31359330
ES.25694.2	chr5	-	5532	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	58	-3362	-20	3362	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCGGTACAGTAGAAGGT	NA	False	NA	NA	False	AATAAA	-20	NA	31359589	31352962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
ES.25694.20	chr5	-	2274	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	38	-5	38	1	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATAGTGTCCTGCTTTAC	NA	False	NA	0	True	ACTAAA	-23	NA	31377993	31360006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.21	chr5	-	4684	4	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	623	junction_2	15.5777619273972	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGCTCATAGTGTCCT	NA	False	NA	-7	True	ACTAAA	-16	NA	31377939	31360013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31363798_31364906_31365801_31377646
ES.25694.22	chr5	-	3998	6	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	8	-2	intron_retention	FALSE	canonical	3	614	junction_2	14.560219778561	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGCTCATAGTGTCCT	NA	False	NA	-7	True	ACTAAA	-16	NA	31377901	31360013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31363798_31364906_31365801_31377646
ES.25694.27	chr5	-	2484	9	NNC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_6	215.149221471982	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGCTCATAGTGTCCT	NA	False	NA	-7	True	ACTAAA	-16	NA	31377914	31360013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362474_31363381_31363798_31364906_31365040_31365370_31365443_31365730_31365801_31377646
ES.25694.28	chr5	-	2874	8	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	595	junction_6	41.8046965431065	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGTGCTCATAGTGTCC	NA	False	NA	-8	True	ACTAAA	-15	NA	31377936	31360014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31361504_31361796_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.30	chr5	-	3121	7	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	614	junction_2	40.6219015912462	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGTGCTCATAGTGTCC	NA	False	NA	-8	True	ACTAAA	-15	NA	31377933	31360014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362474_31363381_31363798_31364906_31365801_31377646
ES.25694.31	chr5	-	2085	10	NNC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	74	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	198.291031903446	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATCGTGCTCATAGT	NA	False	NA	-12	True	ACTAAA	-11	NA	31377835	31360018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363400_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.33	chr5	-	2473	9	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	54	-13	intron_retention	FALSE	canonical	3	595	junction_7	39.8557947480664	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAGCTAATCGTGCT	NA	False	NA	-18	True	ACTAAA	-5	NA	31377855	31360024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.34	chr5	-	3042	7	NIC	ENSMUSG00000029147.12	novel	2307	10	NA	NA	-30	-131	intron_retention	FALSE	canonical	3	595	junction_5	44.9904310813854	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGAACACTTTATTT	NA	False	NA	NA	False	NA	NA	NA	31377939	31360142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31360629_31360915_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ES.25694.35	chr5	-	5615	1	FSM	ENSMUSG00000106717.2	ENSMUST00000200853.2	3972	1	-1694	51	-1694	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGTGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	31373353	31367738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31367700_31373400
ES.25694.36	chr5	-	194	1	FSM	ENSMUSG00000106717.2	ENSMUST00000200853.2	3972	1	360	3418	360	-3418	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAATAATAATAGTGTTA	NA	False	NA	NA	False	NA	NA	NA	31371299	31371105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31371100_31371300
ES.25694.37	chr5	-	1852	1	FSM	ENSMUSG00000029147.12	ENSMUST00000200740.2	1797	1	-30	-25	-30	25	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGTGCACA	NA	False	NA	NA	False	NA	NA	NA	31377939	31376087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31376100_31377900
ES.25694.4	chr5	-	5349	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-51	3359	intron_retention	FALSE	canonical	3	16	junction_3	82.6935440177903	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGCGGTACAGTAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	31359698	31352965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357492_31357578_31358167_31358926_31359083_31359619
ES.25694.5	chr5	-	2203	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	27	-2	27	2	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTCTGCTGAATTGGC	NA	False	NA	-15	True	AATAAA	-18	NA	31359620	31356322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
ES.25694.6	chr5	-	1809	3	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_2	99	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359599	31356324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357492_31357578_31358167_31359545
ES.25694.7	chr5	-	1924	5	NIC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	38	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	78.2476037971771	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359609	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31357492_31357578_31357731_31357995_31358167_31358926_31359083_31359330
ES.25694.8	chr5	-	1890	4	NNC	ENSMUSG00000043059.17	novel	2228	4	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_1	82.9578206078246	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTCTCTGCTGAATT	NA	False	NA	-18	True	AATAAA	-15	NA	31359641	31356325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31357450_31357578_31358167_31358926_31359083_31359619
ES.25695.1	chr5	+	157	1	Intergenic	novelGene_21385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31389227	31389384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31389200_31389400
ES.25696.1	chr5	+	2206	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	-4	1	-4	-1	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTTGTGCTTGCGG	NA	False	NA	32	True	AATAAA	-20	NA	31398203	31408909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.10	chr5	+	2156	18	NNC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	122.076129177161	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398240	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408032_31408089_31408235_31408292_31408368
ES.25696.12	chr5	+	3564	17	NNC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	201.679200712419	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398245	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401261_31401336_31401509_31401633_31401801_31401900_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31407026_31407232_31407339_31407433_31407485_31407573_31407722_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.13	chr5	+	2381	16	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	39	7	0	-1	intron_retention	FALSE	canonical	3	461	junction_13	31.0959804476398	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTTGTGTTGTGC	NA	False	NA	26	True	AATAAA	-14	NA	31398246	31408903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024
ES.25696.14	chr5	+	2002	18	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	123.376459930782	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398247	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.15	chr5	+	2496	16	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	461	junction_12	30.6137224133231	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTTGTGCTTGCGG	NA	False	NA	32	True	AATAAA	-20	NA	31398248	31408909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235
ES.25696.16	chr5	+	2168	18	NNC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_14	122.261957121459	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398248	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407722_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.17	chr5	+	5081	16	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	461	junction_11	30.0998338865848	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTTGTGTTGTGC	NA	False	NA	26	True	AATAAA	-14	NA	31398251	31408903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31401336_31401509_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.18	chr5	+	4052	16	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	461	junction_11	32.7708542593703	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398251	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31403190_31404685_31404770_31405027_31405087_31405241_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.19	chr5	+	3784	17	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	6	-4	intron_retention	FALSE	canonical	3	51	junction_2	116.263641672709	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAAGCATCTTGTGTTG	NA	False	NA	23	True	AATAAA	-11	NA	31398252	31408900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.22	chr5	+	2127	18	NNC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	29	-4	intron_retention	FALSE	canonical	0	0	junction_6	124.260664744593	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAAGCATCTTGTGTTG	NA	False	NA	23	True	AATAAA	-11	NA	31398304	31408900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403063_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.23	chr5	+	1759	15	NNC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_3	136.609453761966	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTTGTGTTGTGC	NA	False	NA	26	True	AATAAA	-14	NA	31398305	31408903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401106_31401336_31401509_31401594_31403161_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.25	chr5	+	4571	1	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-433	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31404333	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31404300_31408900
ES.25696.4	chr5	+	2254	17	NNC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	126.5414334319	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398232	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31398347_31401106_31401341_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235
ES.25696.5	chr5	+	3722	17	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	461	junction_12	31.772076478411	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTTGTGTTGTGC	NA	False	NA	26	True	AATAAA	-14	NA	31398233	31408903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.6	chr5	+	2431	18	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-3	0	intron_retention	FALSE	canonical	3	51	junction_2	112.677602985389	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398235	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.7	chr5	+	2083	19	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	109.789191939219	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398236	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31398347_31401106_31401177_31401261_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.8	chr5	+	4928	17	NIC	ENSMUSG00000029148.16	novel	2221	19	NA	NA	-2	0	intron_retention	FALSE	canonical	3	461	junction_12	31.7460627480007	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	False	NA	27	True	AATAAA	-15	NA	31398236	31408904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ES.25696.9	chr5	+	2478	15	ISM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	29	3	-2	0	intron_retention	FALSE	canonical	3	461	junction_13	24.8839141550012	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGTGTTGTGCTTGC	NA	False	NA	30	True	AATAAA	-18	NA	31398236	31408907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887
ES.25697.1	chr5	+	1046	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	-19	0	-19	0	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409015	31410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
ES.25697.10	chr5	+	1258	1	NIC	ENSMUSG00000029149.15	novel	1027	6	NA	NA	13	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409283	31410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31409300_31410500
ES.25697.2	chr5	+	939	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	-32	-3	-17	1	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGATTACAGTTACT	NA	False	NA	7	True	AATAAA	-19	NA	31409017	31410544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
ES.25697.3	chr5	+	1227	4	NNC	ENSMUSG00000029149.15	novel	904	7	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	38.0263066836631	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409030	31410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31409448_31409535_31410134_31410234_31410347_31410441
ES.25697.4	chr5	+	1419	2	FSM	ENSMUSG00000029149.15	ENSMUST00000202384.2	773	2	-648	2	-3	0	multi-exon	FALSE	canonical	3	89	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409031	31410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31410347_31410437
ES.25697.6	chr5	+	1313	3	FSM	ENSMUSG00000029149.15	ENSMUST00000201565.2	522	3	-786	-5	3	0	multi-exon	FALSE	canonical	3	89	junction_2	4.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	9	True	AATAAA	-21	NA	31409037	31410546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31410134_31410238_31410347_31410437
ES.25697.7	chr5	+	1082	5	NIC	ENSMUSG00000029149.15	novel	904	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_4	24.701973605362	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATTACAGTTAC	NA	False	NA	6	True	AATAAA	-18	NA	31409060	31410543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410441
ES.25697.9	chr5	+	1323	2	ISM	ENSMUSG00000029149.15	ENSMUST00000201565.2	522	3	-710	0	8	0	intron_retention	FALSE	canonical	3	98	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409113	31410541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31410134_31410238
ES.25698.1	chr5	+	3972	12	Antisense	novelGene_ENSMUSG00000038564.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31418774	31426227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31418847_31419173_31420409_31420710_31420829_31420916_31421070_31421120_31421222_31421752_31421841_31422661_31422805_31422984_31423337_31423517_31423767_31423977_31424057_31424577_31424670_31424937
ES.25698.2	chr5	+	1431	1	Antisense	novelGene_ENSMUSG00000038564.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACATTACAGTACCATAAG	NA	False	NA	NA	False	NA	NA	NA	31424830	31426261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31424800_31426300
ES.25699.1	chr5	+	181	1	Intergenic	novelGene_21386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31428112	31428293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31428100_31428300
ES.257.1	chr1	-	2257	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACATTTCTGGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	35985068	35982811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_35982800_35985100
ES.2570.11	chr10	-	3924	6	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-261	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	89.7984409664221	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCTCCTGCTCTGGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	34083972	34027387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083802
ES.2570.12	chr10	-	3190	5	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-7704	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.20229538289	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	5345	False	NA	-10	True	AATAAA	-14	NA	34038964	34027388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34028665_34028737_34029971_34031904_34032113_34035964_34036205_34038731
ES.2570.13	chr10	-	4015	7	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.40577265678	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	False	NA	-10	True	AATAAA	-14	NA	34083219	34027388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34056046_34056165_34059687_34060157_34083075
ES.2570.14	chr10	-	3822	7	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-138	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.5404093837228	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	False	NA	-10	True	AATAAA	-14	NA	34083211	34027388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029797_34029863_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ES.2570.15	chr10	-	3828	6	NIC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	89.4091717890284	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	False	NA	-10	True	AATAAA	-14	NA	34083661	34027388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083586
ES.2570.16	chr10	-	3891	6	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.3851683263848	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATCTCTCCTGCTCTGGT	NA	False	NA	-11	True	AATAAA	-13	NA	34083229	34027389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036194_34038731_34038986_34059691_34060157_34083075
ES.2570.18	chr10	-	3737	7	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-119	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.5404093837228	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTCTCCTGCTCTGG	NA	False	NA	-12	True	AATAAA	-12	NA	34083192	34027390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34027958_34028088_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ES.2570.19	chr10	-	3827	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	467	95	-171	-95	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACATGGAACTAAAGT	NA	False	NA	-105	True	AATAAA	-28	NA	34083244	34027483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ES.2570.2	chr10	-	5857	5	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-167	9	intron_retention	FALSE	canonical	3	59	junction_3	74.6290828028859	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTGGTGTGCTTCTTC	NA	False	NA	-1	True	AATAAA	-23	NA	34083240	34027379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34032113_34035964_34036205_34038731_34038986_34059691_34060157_34083075
ES.2570.20	chr10	-	3742	7	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-140	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.5404093837228	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAATACCAAAGAACA	NA	False	NA	-117	True	AATAAA	-16	NA	34083213	34027495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34028542_34028583_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ES.2570.21	chr10	-	3986	1	Intergenic	novelGene_1947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAAGATAAGTATGTT	NA	False	NA	NA	False	AAGAAA	-2	NA	34048395	34044409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34044400_34048400
ES.2570.22	chr10	-	1715	3	NNC	ENSMUSG00000039497.9	novel	287	2	NA	NA	-152	9134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGCTGTCTCCCCATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	34083225	34050996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34052165_34059759_34060157_34083075
ES.2570.23	chr10	-	5111	2	ISM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	482	27811	-156	4931	5prime_fragment	FALSE	canonical	3	218	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAGCCACTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	34083229	34055199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_34060157_34083075
ES.2570.24	chr10	-	5833	1	FSM	ENSMUSG00000111361.2	ENSMUST00000213617.2	1694	1	-5214	1075	-5214	-1075	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	34061138	34055305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34055300_34061100
ES.2570.25	chr10	-	4079	1	FSM	ENSMUSG00000111361.2	ENSMUST00000213617.2	1694	1	-3657	1272	-3657	-1272	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34059581	34055502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34055500_34059600
ES.2570.26	chr10	-	3184	2	ISM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	195	30025	115	2717	5prime_fragment	FALSE	canonical	3	218	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACATTCACATAGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	34083516	34057413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_34060157_34083075
ES.2570.27	chr10	-	158	1	Intergenic	novelGene_1948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34063891	34063733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34063700_34063900
ES.2570.3	chr10	-	4445	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	-47	-9	-47	9	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTGGTGTGCTTCTTC	NA	False	NA	-1	True	AATAAA	-23	NA	34083758	34027379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ES.2570.5	chr10	-	3810	6	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-542	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	100.079168661615	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34084253	34027385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059691_34060157_34084195
ES.2570.6	chr10	-	3945	6	NIC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	72	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	89.7984409664221	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083001	34027385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34082812
ES.2570.7	chr10	-	4164	7	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	-134	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.40577265678	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTGCTCTGGTGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	34083207	34027385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34039733_34040010_34059687_34060157_34083075
ES.2570.8	chr10	-	3814	6	NNC	ENSMUSG00000039497.9	novel	4389	6	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	89.7984409664221	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCCTGCTCTGGTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	34083612	34027386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083553
ES.25700.1	chr5	-	5372	4	Antisense	novelGene_ENSMUSG00000029148.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAACCTGTGTGTGATTA	NA	False	NA	NA	False	AATGAA	-21	NA	31407164	31399910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31401334_31401507_31405081_31405236_31405339_31406890
ES.25700.10	chr5	-	6421	54	Fusion	ENSMUSG00000038552.15_ENSMUSG00000038564.12	novel	5403	48	NA	NA	5	-1	multi-exon	FALSE	canonical	0	0	junction_47	21.5634541776074	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCATTCTTTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	31453275	31410624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31450757_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ES.25700.12	chr5	-	5854	47	NIC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	-65	-1	intron_retention	FALSE	canonical	3	41	junction_37	14.3313475859561	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCATTCTTTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	31448525	31410624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ES.25700.13	chr5	-	5162	47	NNC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	17.1779852079166	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCATTCTTTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	31448448	31410624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31448407
ES.25700.14	chr5	-	6694	46	NIC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	41	junction_37	14.2567289722311	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGCTGCATTCTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	31448465	31410625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31442684_31442802_31442883_31443106_31443462_31443920_31444034_31444237_31444382_31448317
ES.25700.15	chr5	-	6471	43	NNC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_16	20.0593789736187	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGCTGCATTCTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	31448386	31410625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418848_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443462_31443920_31444382_31448250
ES.25700.16	chr5	-	5398	48	NNC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.7024447872029	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGCTGCATTCTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	31448445	31410625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31410769_31410896_31410989_31411152_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ES.25700.19	chr5	-	3793	20	NNC	ENSMUSG00000038564.12	novel	774	8	NA	NA	4906	1859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.5984941385565	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGTGTGAGAGTGAG	NA	False	NA	NA	False	NA	NA	NA	31429419	31415963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31416066_31416257_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330
ES.25700.2	chr5	-	5743	17	ISM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	29604	-3900	-259	3900	3prime_fragment	TRUE	canonical	3	55	junction_9	15.8221314540741	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAAGTCTGTCTGGTTTT	NA	False	NA	NA	False	TATAAA	-5	NA	31418847	31406720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782
ES.25700.20	chr5	-	2312	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	8	13	8	-13	multi-exon	FALSE	canonical	3	9	junction_5	5.32290647422377	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTATAATTTGAGT	NA	False	NA	NA	False	AATAAA	-26	NA	31453272	31449598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ES.25700.21	chr5	-	2569	4	NIC	ENSMUSG00000038552.15	novel	2333	7	NA	NA	18	1	intron_retention	FALSE	canonical	3	9	junction_2	7.07106781186548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGGTTCCTGTATG	NA	False	NA	NA	False	AATAAA	-18	NA	31453262	31450228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31450831_31451029_31452466_31452556_31452702_31452876
ES.25700.22	chr5	-	1716	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	-31	648	-31	-4	multi-exon	FALSE	canonical	3	9	junction_5	5.32290647422377	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAACTGACTGGTTCCT	NA	False	NA	NA	False	AATAAA	-13	NA	31453311	31450233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ES.25700.3	chr5	-	5475	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	-74	2	-65	1	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTGCATTCTTTGCTC	NA	False	NA	-1	True	ATTAAA	-18	NA	31448525	31410622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ES.25700.8	chr5	-	5645	47	NNC	ENSMUSG00000038564.12	novel	5403	48	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_21	17.1844216610885	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTGCATTCTTTGCT	NA	False	NA	-2	True	ATTAAA	-17	NA	31448427	31410623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421071_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443462_31443920_31444034_31444237_31444382_31448317
ES.25701.1	chr5	+	3239	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.740035228827	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7113	False	NA	16	True	AATAAA	-17	NA	31609745	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622795_31622978_31623575_31623676_31623958_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.10	chr5	+	3220	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	92.4749766248965	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7147	False	NA	16	True	AATAAA	-17	NA	31609779	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609844_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.11	chr5	+	3214	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	115.791569209507	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAAGTCTCTGGTCCTC	7149	False	NA	9	True	AATAAA	-10	NA	31609781	31639091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628493_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.12	chr5	+	3699	12	NIC	ENSMUSG00000062761.8	novel	3045	13	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_7	100.286202012289	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAAGTCTCTGGTCCTCC	7149	False	NA	10	True	AATAAA	-11	NA	31609781	31639092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.13	chr5	+	3228	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	92.8146300728261	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7149	False	NA	13	True	AATAAA	-14	NA	31609781	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.14	chr5	+	3222	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	114.338283420539	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7149	False	NA	13	True	AATAAA	-14	NA	31609781	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627713_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.15	chr5	+	3874	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	1	intron_retention	FALSE	canonical	3	284	junction_12	29.0684059112677	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTCCTCCTTGCTGC	7149	False	NA	17	True	AATAAA	-18	NA	31609781	31639099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.16	chr5	+	3135	12	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	115.733592628977	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7149	False	NA	16	True	AATAAA	-17	NA	31609781	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31633016_31633080_31634124_31634224_31637313
ES.25701.17	chr5	+	3196	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	124.372731693442	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7149	False	NA	16	True	AATAAA	-17	NA	31609781	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630831_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.18	chr5	+	3074	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	-158	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACGGTGTGTGTGTGCTG	7149	False	NA	NA	False	NA	NA	NA	31609781	31638935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.19	chr5	+	3249	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.5129524986154	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7149	False	NA	16	True	AATAAA	-17	NA	31609781	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609934_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.2	chr5	+	3255	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7131	False	NA	16	True	AATAAA	-17	NA	31609763	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.20	chr5	+	3072	12	NIC	ENSMUSG00000062761.8	novel	3045	13	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	120.216677656542	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTCCTCCTTGCTGCCA	7149	False	NA	19	True	AATAAA	-20	NA	31609781	31639101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.21	chr5	+	3714	12	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-1	2	intron_retention	FALSE	canonical	3	73	junction_1	80.8471673146927	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7160	False	NA	13	True	AATAAA	-14	NA	31609792	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.23	chr5	+	3152	12	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	115.360376771774	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7171	False	NA	16	True	AATAAA	-17	NA	31609803	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31634124_31634224_31637313
ES.25701.24	chr5	+	3229	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	93.7967082855635	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAAGTCTCTGGTCCTC	7174	False	NA	9	True	AATAAA	-10	NA	31609806	31639091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630831_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.25	chr5	+	3257	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	93.7481202967377	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7176	False	NA	16	True	AATAAA	-17	NA	31609808	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627713_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.27	chr5	+	2993	11	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	103.549215351928	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7185	False	NA	13	True	AATAAA	-14	NA	31609817	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31637313
ES.25701.28	chr5	+	3928	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_1	95.9837949285654	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7192	False	NA	16	True	AATAAA	-17	NA	31609824	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31610656_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.29	chr5	+	3345	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	95.2633223844097	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTCTCTGGTCCTCCT	7193	False	NA	11	True	AATAAA	-12	NA	31609825	31639093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610656_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.3	chr5	+	3313	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	-14	0	-10	0	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7132	False	NA	16	True	AATAAA	-17	NA	31609764	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.30	chr5	+	3815	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	8	junction_6	94.3780812594864	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGTCCTCCTTGC	7193	False	NA	14	True	AATAAA	-15	NA	31609825	31639096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627713_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.31	chr5	+	3378	12	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	3	2	intron_retention	FALSE	canonical	2	10	junction_4	95.2501708204364	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7194	False	NA	13	True	AATAAA	-14	NA	31609826	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31624020_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.32	chr5	+	3355	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.068008261917	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7195	False	NA	16	True	AATAAA	-17	NA	31609827	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622789_31622978_31623581_31623851_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.33	chr5	+	3168	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	124.275120420604	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7197	False	NA	13	True	AATAAA	-14	NA	31609829	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627713_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.34	chr5	+	1010	1	FSM	ENSMUSG00000062761.8	ENSMUST00000201859.2	3522	1	6	2506	6	70	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAATGGAGTGTGTGT	7197	False	NA	NA	False	AATAAA	-11	NA	31609829	31610839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31609800_31610800
ES.25701.35	chr5	+	3255	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	92.2209849175967	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7202	False	NA	16	True	AATAAA	-17	NA	31609834	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609934_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.36	chr5	+	2136	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	57	1106	12	-1101	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTTAAAGCGTTA	7203	False	NA	NA	False	TATAAA	-14	NA	31609835	31637992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.37	chr5	+	3140	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_10	94.2995743480437	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7203	False	NA	16	True	AATAAA	-17	NA	31609835	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31633016_31633080_31634124_31634224_31637313
ES.25701.38	chr5	+	3496	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	13	0	intron_retention	FALSE	canonical	3	217	junction_1	42.610314348628	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7204	False	NA	16	True	AATAAA	-17	NA	31609836	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.39	chr5	+	3132	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	123.365986668395	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7205	False	NA	16	True	AATAAA	-17	NA	31609837	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31633016_31633080_31634124_31634224_31637313
ES.25701.4	chr5	+	3286	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	95.5406911668481	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7143	False	NA	16	True	AATAAA	-17	NA	31609775	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628493_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.40	chr5	+	1229	2	NNC	ENSMUSG00000062761.8	novel	331	2	NA	NA	15	4999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGCCAAAAAAAAAAAA	7206	False	NA	NA	False	NA	NA	NA	31609838	31618344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31610163_31617439
ES.25701.41	chr5	+	3730	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	15	0	intron_retention	FALSE	canonical	3	217	junction_1	42.9143203242098	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7206	False	NA	16	True	AATAAA	-17	NA	31609838	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.43	chr5	+	3401	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_4	92.4721611714357	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7211	False	NA	13	True	AATAAA	-14	NA	31609843	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623851_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.44	chr5	+	5784	11	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	73	junction_1	82.336869019899	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7211	False	NA	16	True	AATAAA	-17	NA	31609843	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31633080_31634124_31634224_31637313
ES.25701.45	chr5	+	4572	11	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	217	junction_1	46.3254789505732	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7217	False	NA	16	True	AATAAA	-17	NA	31609849	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.47	chr5	+	3299	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.454005388795	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTCTCTGGTCCTCCT	7229	False	NA	11	True	AATAAA	-12	NA	31609861	31639093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31625497_31625585_31627701_31627801_31628340_31628493_31630113_31630306_31630451_31630681_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.48	chr5	+	1863	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	89	1347	6	-1342	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGTTCACTTTCTCCCC	7235	False	NA	NA	False	TATAAA	-16	NA	31609867	31637751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.49	chr5	+	3073	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	92.7086235950512	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTCTCTGGTCCTCCTT	7243	False	NA	12	True	AATAAA	-13	NA	31609875	31639094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.5	chr5	+	3938	13	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	2	2	intron_retention	FALSE	canonical	2	2	junction_1	126.557271839889	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	7144	False	NA	13	True	AATAAA	-14	NA	31609776	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31610656_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630831_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.50	chr5	+	6115	2	NNC	ENSMUSG00000062761.8	novel	331	2	NA	NA	-151	5007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7715	False	NA	NA	False	NA	NA	NA	31610347	31618352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31613666_31615555
ES.25701.51	chr5	+	209	1	FSM	ENSMUSG00000062761.8	ENSMUST00000201859.2	3522	1	1954	1359	1279	1217	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTAGCAGGAGCCAGGTC	9145	False	NA	NA	False	NA	NA	NA	31611777	31611986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31611800_31612000
ES.25701.52	chr5	+	3164	3	Genic_Genomic	ENSMUSG00000062761.8_ENSMUSG00000107120.2	novel	3522	1	NA	NA	1978	-1376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTTTGGTTTTTGT	9844	False	NA	NA	False	NA	NA	NA	31612476	31618377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_31613376_31613706_31614969_31617374
ES.25701.53	chr5	+	4788	1	FSM	ENSMUSG00000107120.2	ENSMUST00000202437.2	1388	1	243	-3643	243	3643	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAACAACAAAA	3713	False	NA	NA	False	NA	NA	NA	31618608	31623396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31618600_31623400
ES.25701.54	chr5	+	5577	12	ISM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	10528	3	-2640	2	3prime_fragment	FALSE	canonical	3	284	junction_11	29.0681729333983	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTGGTCCTCCTTG	5411	False	NA	13	True	AATAAA	-14	NA	31620306	31639095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.7	chr5	+	3114	12	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	113.745402232027	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7147	False	NA	16	True	AATAAA	-17	NA	31609779	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25701.8	chr5	+	3292	14	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	94.5426236800507	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7147	False	NA	16	True	AATAAA	-17	NA	31609779	31639098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31609922_31610498_31610558_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ES.25702.1	chr5	+	180	1	Intergenic	novelGene_21387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTATTAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	31639546	31639726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31639500_31639700
ES.25703.1	chr5	+	229	1	FSM	ENSMUSG00000029138.5	ENSMUST00000202441.2	2737	1	1139	1369	1020	-1369	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATTCAGTTCCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	31644222	31644451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31644200_31644500
ES.25704.1	chr5	-	3028	3	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1204	2516	intron_retention	FALSE	canonical	2	2	junction_1	46	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	718	False	NA	NA	False	NA	NA	NA	31646496	31641456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31641682_31642599_31645334_31646427
ES.25704.2	chr5	-	2491	1	Antisense	novelGene_ENSMUSG00000029138.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	3265	False	NA	NA	False	NA	NA	NA	31643949	31641458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31641500_31643900
ES.25704.3	chr5	-	815	3	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	720	False	NA	0	True	NA	NA	NA	31646494	31643974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31644122_31644604_31645206_31646427
ES.25704.4	chr5	-	1455	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1231	2	intron_retention	FALSE	canonical	3	94	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	691	False	NA	0	True	NA	NA	NA	31646523	31643974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31645334_31646427
ES.25704.5	chr5	-	463	3	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1190	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	59.5	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	732	False	NA	0	True	NA	NA	NA	31646482	31643974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31644119_31644941_31645206_31646427
ES.25704.6	chr5	-	1298	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1202	2	intron_retention	FALSE	canonical	3	124	junction_1	0	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	720	False	NA	0	True	NA	NA	NA	31646494	31643974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31645206_31646427
ES.25704.7	chr5	-	844	3	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1191	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGTTATGTCTTTTG	731	False	NA	0	True	NA	NA	NA	31646483	31643974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31644122_31644564_31645206_31646427
ES.25704.8	chr5	-	349	2	NNC	ENSMUSG00000107142.2	novel	1535	2	NA	NA	-1205	-950	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	0	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCACAGTTGCCCGTGTT	717	False	NA	NA	False	NA	NA	NA	31646497	31644926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31645206_31646427
ES.25704.9	chr5	-	493	2	NNC	ENSMUSG00000107142.2	novel	420	2	NA	NA	-1223	-952	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_1	0	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCACAGTTGCCCGTG	699	False	NA	NA	False	NA	NA	NA	31646515	31644928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31645334_31646427
ES.25705.1	chr5	+	178	1	Intergenic	novelGene_21388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAACATAACAGACACATT	NA	False	NA	NA	False	AAAAAG	-19	NA	31647800	31647978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31647800_31648000
ES.25706.1	chr5	+	179	1	Intergenic	novelGene_21389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	31651058	31651237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31651100_31651200
ES.25707.1	chr5	+	3654	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-41	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	269.32883928135	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGCTAAGATTCATTCA	NA	False	NA	NA	False	NA	NA	NA	31652043	31670250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652695_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.10	chr5	+	2125	13	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	556	intron_retention	FALSE	canonical	2	8	junction_10	284.590483072705	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652096	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663584_31664817_31664909_31666642_31666751_31668175
ES.25707.11	chr5	+	1785	15	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	556	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	349.268309528386	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652096	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31653922_31654065_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.12	chr5	+	3734	15	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	405.116996202634	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCGAAGATTGGCTAAGA	NA	False	NA	NA	False	NA	NA	NA	31652097	31670242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652695_31652861_31652956_31653922_31654065_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.13	chr5	+	1062	3	ISM	ENSMUSG00000064037.14	ENSMUST00000201881.4	4679	5	3	5342	2	-34	5prime_fragment	FALSE	canonical	3	18	junction_1	532.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGTAGGAGA	NA	False	NA	NA	False	NA	NA	NA	31652098	31655026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31652695_31652861_31652956_31654654
ES.25707.14	chr5	+	2115	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	556	intron_retention	FALSE	canonical	3	859	junction_7	68.3745302644844	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652099	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.15	chr5	+	2115	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	564	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	269.32883928135	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGCTTTCCTGTCATGG	NA	False	NA	32	True	GATAAA	-21	NA	31652099	31668767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652695_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.16	chr5	+	2107	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	562	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	366.812674892156	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTTTCCTGTCAT	NA	False	NA	30	True	GATAAA	-19	NA	31652099	31668765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652610_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660860_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.17	chr5	+	2227	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	20	897	-6	-897	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCTCACCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	31652104	31669351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.18	chr5	+	4610	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-6	556	intron_retention	FALSE	canonical	3	859	junction_7	68.4401167940036	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652104	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31666751_31668175
ES.25707.19	chr5	+	2163	15	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-6	556	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	405.526364929657	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652104	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652695_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.2	chr5	+	1664	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	1	1479	1	566	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTCCTGTCATGGTT	NA	False	NA	34	True	GATAAA	-23	NA	31652085	31668769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.20	chr5	+	1660	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-6	556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	274.807215911736	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652104	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660709_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.21	chr5	+	1595	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-6	556	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	284.201060968385	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652104	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31664817_31664909_31666642_31666751_31668175
ES.25707.22	chr5	+	2554	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-5	555	intron_retention	FALSE	canonical	2	3	junction_3	361.112809989429	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652105	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.23	chr5	+	1920	15	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-5	556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	356.153257541108	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652105	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31660859_31661146_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.24	chr5	+	1642	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-5	555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.672097431889	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652105	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31654917_31654994_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.25	chr5	+	2875	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-5	556	intron_retention	FALSE	canonical	3	859	junction_7	67.3065128101781	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652105	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31664909_31666642_31666751_31668175
ES.25707.26	chr5	+	2493	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	556	intron_retention	FALSE	canonical	3	859	junction_6	71.0756150557669	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652106	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.27	chr5	+	1625	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	366.247176211422	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652106	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652863_31652956_31654654_31654695_31655683_31655751_31656616_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.28	chr5	+	1904	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	768	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	271.240564420188	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGGTCCATTCCGTC	NA	False	NA	NA	False	AATACA	-18	NA	31652106	31668971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668116
ES.25707.29	chr5	+	1627	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	273.652373097284	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652106	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655689_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.3	chr5	+	3145	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	1	-2	1	2	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGCTAAGATTCATTCA	NA	False	NA	NA	False	NA	NA	NA	31652085	31670250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.30	chr5	+	2055	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	363.073761394317	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652106	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652695_31652861_31652956_31654654_31654695_31655683_31655707_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.31	chr5	+	3181	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	555	intron_retention	FALSE	canonical	3	859	junction_6	71.1818387418214	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652106	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.32	chr5	+	3964	11	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-4	563	intron_retention	FALSE	canonical	3	859	junction_5	73.6977611600244	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAGCTTTCCTGTCATG	NA	False	NA	31	True	GATAAA	-20	NA	31652106	31668766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.33	chr5	+	3369	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	22	-247	-4	247	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGGTTTCTATTTCCGT	NA	False	NA	NA	False	AATGAA	-15	NA	31652106	31670495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.34	chr5	+	3106	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-2	567	intron_retention	FALSE	canonical	3	859	junction_6	70.6116137756389	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCCTGTCATGGTTT	NA	False	NA	35	True	GATAAA	-24	NA	31652108	31668770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.35	chr5	+	1648	15	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-2	556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	409.877414476523	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652108	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652228_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31655707_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.36	chr5	+	3506	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-2	556	intron_retention	FALSE	canonical	3	859	junction_6	69.9252257063404	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652108	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31664909_31666642_31666751_31668175
ES.25707.37	chr5	+	3345	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-1	555	intron_retention	FALSE	canonical	3	859	junction_7	66.3243968674779	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652109	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31661403_31662296_31662380_31663536_31664909_31666642_31666751_31668175
ES.25707.38	chr5	+	1844	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	25	1275	-1	770	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTCCATTCCGTCCA	NA	False	NA	NA	False	AATACA	-20	NA	31652109	31668973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.39	chr5	+	2619	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-1	556	intron_retention	FALSE	canonical	3	859	junction_6	70.319311398474	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652109	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.4	chr5	+	6113	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	-3	intron_retention	FALSE	canonical	3	859	junction_7	68.4401167940036	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGATTGGCTAAGATTC	NA	False	NA	NA	False	NA	NA	NA	31652087	31670245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31666751_31668175
ES.25707.40	chr5	+	3176	15	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	349.787253125353	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAAGATTGGCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	31652109	31670244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.41	chr5	+	8121	9	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	1	555	intron_retention	FALSE	canonical	3	956	junction_7	40.7229588193196	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTGGTAAGCTTTC	NA	False	NA	23	True	GATAAA	-12	NA	31652111	31668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31656649_31658197_31658277_31658455_31661403_31662296_31662380_31663536_31666751_31668175
ES.25707.42	chr5	+	1802	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	2	771	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	284.201060968385	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTCCATTCCGTCCAT	NA	False	NA	NA	False	AATACA	-21	NA	31652112	31668974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31664817_31664909_31666642_31666751_31668175
ES.25707.43	chr5	+	1811	14	NIC	ENSMUSG00000064037.14	novel	4679	5	NA	NA	-34	556	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	273.456399389124	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652310	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652610_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.5	chr5	+	2204	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	3	556	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	270.876180801199	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTAAGCTTTCC	NA	False	NA	24	True	GATAAA	-13	NA	31652087	31668759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652780_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.6	chr5	+	2562	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	4	578	4	-578	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACACCTCTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	31652088	31669670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.7	chr5	+	3143	12	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	-2	559	intron_retention	FALSE	canonical	3	859	junction_5	73.713651919701	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTAAGCTTTCCTGT	NA	False	NA	27	True	GATAAA	-16	NA	31652093	31668762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31652956_31654654_31654695_31655683_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.8	chr5	+	3684	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	270.876180801199	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGGCTAAGATTCATT	NA	False	NA	NA	False	NA	NA	NA	31652096	31670248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652780_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25707.9	chr5	+	1873	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.972637168677	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGGATTTGGTCCATT	NA	False	NA	NA	False	AATACA	-13	NA	31652096	31668966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31652251_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ES.25708.1	chr5	-	5797	5	Antisense	novelGene_ENSMUSG00000064037.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAAAGCATCA	NA	False	NA	NA	False	NA	NA	NA	31665656	31656081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31656646_31658194_31658274_31658451_31661402_31662295_31662378_31663534
ES.25708.2	chr5	-	2562	1	Antisense	novelGene_ENSMUSG00000064037.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGGCTGCTGCTCGG	NA	False	NA	NA	False	NA	NA	NA	31665658	31663096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31663100_31665700
ES.25709.1	chr5	+	2735	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	-236	0	-219	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684119	31711386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
ES.25709.10	chr5	+	3602	5	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-9	1839	6	-7	intron_retention	FALSE	canonical	3	90	junction_1	12.4774797134678	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31684346	31692327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787
ES.25709.12	chr5	+	3325	7	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-7	1	-7	-1	intron_retention	FALSE	canonical	3	90	junction_1	11.13552872566	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTGTTTTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	31684348	31694165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201
ES.25709.13	chr5	+	1732	7	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-7	1594	-7	238	5prime_fragment	FALSE	canonical	3	90	junction_1	11.13552872566	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATACTTTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	31684348	31692572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201
ES.25709.15	chr5	+	2159	6	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-3	1815	-3	17	intron_retention	FALSE	canonical	3	90	junction_1	11.1713920350152	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	31684352	31692351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388
ES.25709.16	chr5	+	5042	2	NIC	ENSMUSG00000029141.17	novel	659	4	NA	NA	6	17	intron_retention	TRUE	canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	31684361	31692351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31685029_31687976
ES.25709.17	chr5	+	3185	10	ISM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	6	8905	6	8315	5prime_fragment	FALSE	canonical	3	90	junction_1	11.115554667022	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATGATTCTGTGACTA	NA	False	NA	NA	False	AATACA	-14	NA	31684361	31702481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013
ES.25709.18	chr5	+	4993	14	NNC	ENSMUSG00000029141.17	novel	2806	14	NA	NA	-264	1755	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	32.9904056341435	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTTGAATCAAACCATT	NA	False	NA	NA	False	TATAAA	-1	NA	31684680	31716031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082_31713638_31715376
ES.25709.19	chr5	+	4534	14	NNC	ENSMUSG00000029141.17	novel	2806	14	NA	NA	-89	1469	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	32.9904056341435	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTATACCTTCCTCATAT	NA	False	NA	NA	False	AATAAA	-16	NA	31684855	31715745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082_31713666_31715402
ES.25709.2	chr5	+	2940	15	NNC	ENSMUSG00000029141.17	novel	2499	14	NA	NA	-216	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	41.8081746718002	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGTGATGATCATTC	NA	False	NA	9	True	AGTAAA	-19	NA	31684122	31711384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703183_31703397_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ES.25709.20	chr5	+	4694	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	523	1842	-66	-10	intron_retention	FALSE	canonical	3	90	junction_1	13.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31684878	31692324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976
ES.25709.21	chr5	+	678	1	Intergenic	novelGene_21391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAACAACAACA	NA	False	NA	NA	False	AAAACA	-15	NA	31715044	31715722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31715000_31715700
ES.25709.3	chr5	+	2638	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	-211	-3	-211	2	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGTGATGATCATTC	NA	False	NA	9	True	AGTAAA	-19	NA	31684127	31711384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
ES.25709.6	chr5	+	2120	8	FSM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-17	6	0	-6	multi-exon	FALSE	canonical	3	90	junction_1	11.004637241469	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTGATTTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	31684338	31694160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
ES.25709.7	chr5	+	4693	14	NNC	ENSMUSG00000029141.17	novel	2424	13	NA	NA	0	1707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.9904056341435	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGACTGTTATGAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	31684338	31715983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082_31712605_31714937
ES.25709.9	chr5	+	1518	7	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	-14	1815	1	17	5prime_fragment	FALSE	canonical	3	90	junction_1	11.13552872566	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	31684341	31692351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201
ES.2571.1	chr10	+	268	1	Intergenic	novelGene_1949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGGTTCTGAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	34097784	34098052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_34097800_34098100
ES.25710.1	chr5	+	5693	1	Antisense	novelGene_ENSMUSG00000107352.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGGATGTACTTTAATA	NA	False	NA	NA	False	AGTAAA	-1	NA	31718805	31724498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_31718800_31724500
ES.25711.1	chr5	+	435	3	NIC	ENSMUSG00000105617.5	novel	338	3	NA	NA	20	-79312	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	1163	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTCTTAGAG	7695	False	NA	15	True	AATAAA	-18	NA	31754301	31779984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31754366_31773724_31773832_31779720
ES.25711.10	chr5	+	430	3	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1166.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCTCTTAGAGGTA	NA	False	NA	18	True	AATAAA	-21	NA	31771320	31779987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31771367_31773714_31773832_31779720
ES.25711.11	chr5	+	8664	1	NIC	ENSMUSG00000105617.5	novel	338	3	NA	NA	5	-79312	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTCTTAGAG	NA	False	NA	15	True	AATAAA	-18	NA	31771320	31779984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31771300_31780000
ES.25711.12	chr5	+	508	4	NNC	ENSMUSG00000106918.4	novel	638	4	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	962.363179308565	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATCAAAATA	NA	False	NA	-8	True	NA	NA	NA	31771359	31779961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31771501_31771946_31771966_31773724_31773832_31779720
ES.25711.13	chr5	+	146	1	Intergenic	novelGene_21393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	31789061	31789207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_31789100_31789200
ES.25711.14	chr5	+	3632	1	Genic_Genomic	ENSMUSG00000106918.4	novel	NA	NA	NA	NA	5871	614	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTTGGTAGAGTATGA	4383	False	NA	NA	False	NA	NA	NA	31818710	31822342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_31818700_31822300
ES.25711.15	chr5	+	1788	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	8	-17	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	219.40148130767	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCTTCTTTCAAGTC	5560	False	NA	18	True	AATAAA	-14	NA	31855035	32242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.16	chr5	+	1618	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	266	4	-20	-4	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCTTTGTCCTGAAGG	5818	False	NA	31	True	AATAAA	-27	NA	31855293	32242302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.17	chr5	+	1503	12	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-3	-22	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	202.37699049297	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCACACACCCTTCTTTC	5835	False	NA	13	True	AATAAA	-9	NA	31855310	32242284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31855342_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.18	chr5	+	731	6	NNC	ENSMUSG00000052139.19	novel	715	6	NA	NA	-3	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	300.514625268056	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAGAGAATACGA	5835	False	NA	NA	False	NA	NA	NA	31855310	31988541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978005_31988428
ES.25711.19	chr5	+	1440	3	FSM	ENSMUSG00000107151.2_ENSMUSG00000052139.19	ENSMUST00000201592.4	587	3	-22	-831	4	-7	multi-exon	FALSE	canonical	2	5	junction_2	417.5	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAACTCTACAATTTTA	5842	False	NA	NA	False	NA	NA	NA	31855317	31865964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31855422_31859169_31859322_31864780
ES.25711.2	chr5	+	1833	7	NIC	ENSMUSG00000106918.4	novel	2178	7	NA	NA	-6	666	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	39.7813468293314	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGAGACAGGGTCTGG	NA	False	NA	NA	False	CATAAA	-14	NA	31771276	31816140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31771367_31773724_31773832_31786959_31787065_31807646_31807829_31811811_31811996_31812711_31812865_31815128
ES.25711.20	chr5	+	747	6	FSM	ENSMUSG00000052139.19	ENSMUST00000201202.4	715	6	-32	0	12	0	multi-exon	FALSE	canonical	3	657	junction_3	63.9606128801155	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGATCGTTTAGCT	5850	False	NA	NA	False	AATAAA	-14	NA	31855325	31988560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428
ES.25711.21	chr5	+	2508	12	NNC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-3	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.37699049297	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTTTCCAGGGAAAAT	5861	False	NA	15	True	AATAAA	-15	NA	31855336	32242253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31856404_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.23	chr5	+	2039	8	FSM	ENSMUSG00000052139.19	ENSMUST00000201107.4	2034	8	-5	0	5	0	multi-exon	FALSE	canonical	3	656	junction_6	59.6452095344476	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5869	False	NA	NA	False	TTTAAA	-42	NA	31855344	32159962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704
ES.25711.25	chr5	+	1362	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-4	-13	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	217.028131817053	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTTTCAAGTCTTTG	5870	False	NA	22	True	AATAAA	-18	NA	31855345	32242293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.26	chr5	+	1469	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-3	-17	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	219.67942552729	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCTTCTTTCAAGTC	5871	False	NA	18	True	AATAAA	-14	NA	31855346	32242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32214854_32215009_32241924
ES.25711.27	chr5	+	5087	11	NNC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-1	8923	intron_retention	FALSE	canonical	0	0	junction_10	219.541704466372	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGAGTGCATATGTTT	5873	False	NA	NA	False	AATAAA	-16	NA	31855348	32168885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32164829
ES.25711.28	chr5	+	1630	13	NNC	ENSMUSG00000052139.19	novel	1497	13	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	269.495967296153	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCTTCTTTCAAGTC	5882	False	NA	18	True	AATAAA	-14	NA	31855357	32242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32219010_32219100_32241924
ES.25711.29	chr5	+	1511	12	NNC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	211.004210525535	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCTTCTTTCAAGTC	5884	False	NA	18	True	AATAAA	-14	NA	31855359	32242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241952
ES.25711.3	chr5	+	2216	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	-6	-20	intron_retention	FALSE	canonical	3	1273	junction_1	530	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATCAAAATA	NA	False	NA	-8	True	NA	NA	NA	31771276	31779961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31771367_31771946_31773832_31779720
ES.25711.30	chr5	+	3062	11	NNC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	6	-7031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	219.541704466372	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTGTTATTGCTTGA	5888	False	NA	NA	False	TATAAA	-15	NA	31855363	32207984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32205938
ES.25711.31	chr5	+	1528	12	NNC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-8	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	211.161643461642	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTTTCAAGTCTTTG	5890	False	NA	22	True	AATAAA	-18	NA	31855365	32242293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978008_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.32	chr5	+	1330	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-7	-45	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	219.541704466372	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGGGAAAATAAAATGTC	5911	False	NA	-10	True	AATAAA	-23	NA	31855386	32242261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32241924
ES.25711.33	chr5	+	3401	1	FSM	ENSMUSG00000107151.2	ENSMUST00000201018.2	232	1	-2894	-275	-2894	275	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGAGAAGGCCCAGGA	NA	False	NA	NA	False	NA	NA	NA	31862845	31866246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31862800_31866200
ES.25711.35	chr5	+	503	1	Intergenic	novelGene_21397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTCTCTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	32013783	32014286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32013800_32014300
ES.25711.36	chr5	+	209	1	Intergenic	novelGene_21398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGCTATCGTTAGTG	6930	False	NA	NA	False	NA	NA	NA	32062179	32062388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32062200_32062400
ES.25711.37	chr5	+	176	1	Intergenic	novelGene_21399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATTGTGATTTAT	NA	False	NA	NA	False	NA	NA	NA	32093496	32093672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32093500_32093700
ES.25711.38	chr5	+	6753	2	Intergenic	novelGene_21400	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACGATTCCATTTGTA	NA	False	NA	NA	False	NA	NA	NA	32105139	32112631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32105619_32106357
ES.25711.39	chr5	+	4833	1	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	-48163	29	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAGAAAAGAA	2178	False	NA	NA	False	NA	NA	NA	32155158	32159991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32155200_32160000
ES.25711.4	chr5	+	2806	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	-66	1	8	-1	multi-exon	FALSE	canonical	3	2333	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTTGTCTCTTAGAGG	NA	False	NA	16	True	AATAAA	-19	NA	31771290	31779985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31773832_31779720
ES.25711.5	chr5	+	5324	5	NIC	ENSMUSG00000106918.4	novel	2178	7	NA	NA	8	-841	intron_retention	FALSE	canonical	0	0	junction_3	47.4888144724629	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGCATGTGGCTTAC	NA	False	NA	NA	False	NA	NA	NA	31771290	31819934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31771367_31773724_31773832_31807646_31807829_31812711_31812865_31815128
ES.25711.6	chr5	+	2215	3	NNC	ENSMUSG00000106918.4	novel	773	3	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_1	1166.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCTCTTAGAGGTA	NA	False	NA	18	True	AATAAA	-21	NA	31771294	31779987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_31772240_31772828_31773832_31779720
ES.25711.7	chr5	+	399	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	-20	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATCAAAATA	NA	False	NA	-8	True	NA	NA	NA	31771315	31779961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_31771367_31773724_31773832_31779720
ES.25711.8	chr5	+	1555	12	Fusion	ENSMUSG00000052139.19_ENSMUSG00000106918.4	novel	842	7	NA	NA	5	-17	multi-exon	FALSE	canonical	1	7	junction_6	295.448223708592	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCTTCTTTCAAGTC	NA	False	NA	18	True	AATAAA	-14	NA	31771320	32242289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_31771367_31773724_31773832_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ES.25711.9	chr5	+	1019	3	FSM	ENSMUSG00000106918.4	ENSMUST00000201923.2	773	3	-175	-71	5	1	multi-exon	FALSE	canonical	3	1626	junction_1	353.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGTCTCTTAGAGGTA	NA	False	NA	18	True	AATAAA	-21	NA	31771320	31779987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_31771966_31773724_31773832_31779720
ES.25712.1	chr5	-	2881	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	-194	6	-194	0	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTTATTCCAATTCT	NA	False	NA	-1	True	AATAAA	-19	NA	31684311	31671913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
ES.25712.2	chr5	-	2523	5	NNC	ENSMUSG00000053134.14	novel	2548	5	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.007574888198	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCATCTGAGTTATT	NA	False	NA	-9	True	AATAAA	-11	NA	31684080	31671921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680487_31683958
ES.25712.3	chr5	-	2835	1	NIC	ENSMUSG00000053134.14	novel	2693	5	NA	NA	7854	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGTCATCTGAGTTA	NA	False	NA	-11	True	AATAAA	-9	NA	31674758	31671923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31671900_31674800
ES.25712.4	chr5	-	1950	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	19	724	-18	34	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTCTATTTTGTGTCGT	NA	False	NA	NA	False	AATATA	-38	NA	31684098	31672631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
ES.25712.5	chr5	-	1310	1	FSM	ENSMUSG00000053134.14	ENSMUST00000201692.2	1246	1	-34	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAAAGGAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	31684080	31682770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31682800_31684100
ES.25713.1	chr5	-	178	1	Intergenic	novelGene_21390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	31713872	31713694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31713700_31713900
ES.25714.1	chr5	-	1362	10	NNC	ENSMUSG00000029136.10	novel	412	5	NA	NA	15	67489	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2583040406369	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGGCCTATGCATTT	NA	False	NA	NA	False	NA	NA	NA	31854956	31714293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31714689_31735252_31735340_31736569_31736641_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25714.10	chr5	-	625	5	ISM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	13	35373	13	233	5prime_fragment	FALSE	canonical	3	45	junction_3	2.58602010819715	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTCGTTCCTCCAT	NA	False	NA	NA	False	ACTAAA	-15	NA	31854958	31817155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25714.11	chr5	-	1755	1	Genic_Genomic	ENSMUSG00000029136.10	novel	NA	NA	NA	NA	-291	-36119	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAGGAGACTGGG	NA	False	NA	NA	False	NA	NA	NA	31855262	31853507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_31853500_31855300
ES.25714.2	chr5	-	498	4	Antisense	novelGene_ENSMUSG00000107015.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAACTTATCTGTT	NA	False	NA	NA	False	NA	NA	NA	31754178	31714419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31714689_31735252_31735340_31736569_31736645_31754111
ES.25714.3	chr5	-	2597	1	Genic_Genomic	ENSMUSG00000107355.2_ENSMUSG00000107352.2	novel	NA	NA	NA	NA	-744	2375	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAGAATCATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	31727160	31724563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_31724600_31727200
ES.25714.4	chr5	-	1038	4	Antisense	novelGene_ENSMUSG00000107015.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGTGGAGCAGGCATGTC	NA	False	NA	NA	False	NA	NA	NA	31754253	31733153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_31733888_31735252_31735340_31736569_31736645_31754111
ES.25714.5	chr5	-	1246	1	Intergenic	novelGene_21392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATAAAATTGGCCCCAA	NA	False	NA	NA	False	NA	NA	NA	31777517	31776271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31776300_31777500
ES.25714.6	chr5	-	851	7	NIC	ENSMUSG00000029136.10	novel	1042	8	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	16.8695979007602	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACATGGGTGTGGCT	NA	False	NA	-38	True	AATAAA	-16	NA	31854952	31781789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_31782001_31805064_31805254_31809152_31809245_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25714.7	chr5	-	1022	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	13	7	13	-7	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCACATGGGTGTGGCT	NA	False	NA	-38	True	AATAAA	-16	NA	31854958	31781789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25714.8	chr5	-	13294	7	ISM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	24	10788	24	-10788	5prime_fragment	FALSE	canonical	3	39	junction_2	4.14996653266291	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGTGGGAAGCTGGGCAA	NA	False	NA	NA	False	AATAAA	-29	NA	31854947	31792570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25714.9	chr5	-	1518	8	NNC	ENSMUSG00000029136.10	novel	412	5	NA	NA	12	17492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7758329578168	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAATAGCTTCTGAGAGC	NA	False	NA	NA	False	AATAAA	-17	NA	31854959	31799896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_31800603_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ES.25715.1	chr5	-	179	1	Intergenic	novelGene_21394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	31902807	31902628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31902600_31902800
ES.25716.1	chr5	-	2577	1	Intergenic	novelGene_21395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGAGATCCTACACTAG	5056	False	NA	NA	False	NA	NA	NA	31993825	31991248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31991200_31993800
ES.25717.1	chr5	-	3244	1	Intergenic	novelGene_21396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCTCAAGTAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32000670	31997426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_31997400_32000700
ES.25718.1	chr5	-	196	2	Antisense	novelGene_ENSMUSG00000052139.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCAGTGCACTTTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	32072181	32069761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_32069925_32072148
ES.25719.1	chr5	+	6520	4	FSM	ENSMUSG00000029135.11	ENSMUST00000031017.11	6537	4	15	2	15	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGTGATGGTTCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	32293159	32315184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32294150_32304168_32304421_32307764_32307873_32310014
ES.2572.1	chr10	-	590	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-35	692	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	24.9131825880731	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTCGGTCTCTTTC	NA	False	NA	-2	True	NA	NA	NA	34109562	34106210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34106388_34106902_34107071_34107314_34107400_34109402
ES.2572.2	chr10	-	676	4	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-101	692	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	34.5671648951558	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTCGGTCTCTTTC	NA	False	NA	-2	True	NA	NA	NA	34109628	34106210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34106388_34106902_34107071_34107314_34107420_34109402
ES.2572.3	chr10	-	2701	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	-38	689	intron_retention	FALSE	canonical	0	0	junction_2	46.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTTGTCTCGGTCTCT	NA	False	NA	-5	True	NA	NA	NA	34109565	34106213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34106388_34106902_34107753_34107888
ES.25720.1	chr5	+	4766	59	FSM	ENSMUSG00000029134.15	ENSMUST00000202220.4	4771	59	-27	32	-21	-27	multi-exon	FALSE	canonical	0	0	junction_2	1.98365796695031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATAAAAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	32390030	32521666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32390136_32404698_32404905_32419705_32419768_32421017_32421091_32422244_32422304_32427146_32427194_32427694_32427739_32430390_32430482_32430786_32430839_32433411_32433499_32438442_32438506_32439078_32439159_32442228_32442302_32443146_32443246_32444147_32444205_32447182_32447255_32448553_32448629_32450555_32450620_32455862_32455922_32459979_32460054_32460650_32460695_32463919_32464029_32466507_32466560_32468181_32468263_32471007_32471074_32471338_32471440_32473934_32474017_32474367_32474473_32474571_32474668_32474808_32474881_32475876_32475916_32476333_32476395_32477623_32477683_32478611_32478686_32482736_32482781_32483442_32483552_32485334_32485387_32485755_32485837_32486371_32486438_32487191_32487293_32487907_32487990_32488585_32488691_32490134_32490231_32490773_32490846_32495413_32495480_32499245_32499307_32499822_32499882_32502187_32502256_32502719_32502764_32502980_32503081_32506965_32507018_32507881_32507963_32509036_32509103_32509511_32509607_32510969_32511049_32512129_32512235_32512660_32512757_32519870_32519946_32521338
ES.25720.2	chr5	+	4902	33	NNC	ENSMUSG00000029134.15	novel	4699	58	NA	NA	-36911	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.35165334126865	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCGGTCCCAGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	32474001	32523866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32474017_32474367_32474473_32474571_32474668_32474808_32474881_32475876_32475916_32476333_32476395_32477623_32477683_32478611_32478686_32482736_32482781_32483442_32483552_32485334_32485387_32485757_32485837_32486371_32486438_32487191_32487293_32487907_32487990_32488585_32488691_32490134_32490231_32490773_32490846_32495413_32495480_32499245_32499307_32499822_32499882_32502187_32502256_32502719_32502764_32502980_32503081_32506965_32507018_32507881_32507963_32509036_32509103_32509511_32509607_32510969_32511049_32512129_32512235_32512660_32512757_32519870_32519946_32521338
ES.25720.3	chr5	+	1441	16	NNC	ENSMUSG00000029134.15	novel	2938	5	NA	NA	-16793	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.21710521977545	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGTCCATGTTCT	1793	False	NA	NA	False	GATAAA	-16	NA	32494119	32521690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32494162_32495413_32495480_32499245_32499307_32499822_32499882_32502187_32502256_32502719_32502764_32502980_32503081_32506965_32507018_32507881_32507963_32509036_32509103_32509511_32509607_32510969_32511049_32512129_32512235_32512660_32512757_32519870_32519946_32521338
ES.25720.4	chr5	+	1372	13	NNC	ENSMUSG00000029134.15	novel	2938	5	NA	NA	-9579	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.17785572422866	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTCCATGTTCTTC	9007	False	NA	NA	False	GATAAA	-18	NA	32501333	32521692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32501491_32502187_32502256_32502719_32502764_32502980_32503081_32506965_32507018_32507881_32507963_32509036_32509103_32509511_32509607_32510969_32511049_32512129_32512235_32512660_32512757_32519870_32519946_32521338
ES.25721.1	chr5	+	158	1	Intergenic	novelGene_21401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32532953	32533111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32533000_32533100
ES.25722.1	chr5	+	1445	1	FSM	ENSMUSG00000107211.2	ENSMUST00000202263.2	970	1	-75	-400	-75	400	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTGTGGAGTACAGAC	NA	False	NA	NA	False	TTTAAA	-45	NA	32577271	32578716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32577300_32578700
ES.25723.1	chr5	+	3204	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	-5	2763	-5	4	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATTATTCTGTGTTG	2690	False	NA	27	True	AGTAAA	-24	NA	32616181	32650104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.10	chr5	+	3497	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-84	956	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTGTCACTGTTTTTG	2920	False	NA	9	True	AATAAA	-18	NA	32616411	32651056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.11	chr5	+	2544	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	229	3189	-80	-422	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTAACAAATGTCAAGGA	2924	False	NA	NA	False	NA	NA	NA	32616415	32649678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.12	chr5	+	5727	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	231	4	-78	-4	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTGGTCCTAATAAT	2926	False	NA	NA	False	AATAAA	-28	NA	32616417	32652863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.13	chr5	+	2726	7	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-78	-7	intron_retention	FALSE	canonical	0	0	junction_2	513.919065180069	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAACGTCTGAGTGATT	2926	False	NA	16	True	AGTAAA	-13	NA	32616417	32650093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32616752_32635409_32635542_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.14	chr5	+	4494	7	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-78	-6	intron_retention	FALSE	canonical	0	0	junction_3	511.719242684241	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	2926	False	NA	17	True	AGTAAA	-14	NA	32616417	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638033_32638263_32640703_32640809_32642602_32642675_32643224_32645050_32648297
ES.25723.15	chr5	+	2435	6	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-77	-6	intron_retention	FALSE	canonical	0	0	junction_1	676.584954015384	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	2927	False	NA	17	True	AGTAAA	-14	NA	32616418	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32644957_32648297
ES.25723.16	chr5	+	3308	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	232	2422	-77	345	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAAATTAGTATTGGTT	2927	False	NA	NA	False	ATTAAA	-16	NA	32616418	32650445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.17	chr5	+	6047	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-76	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	475.389378535627	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGTCTGAGTGATTATT	2928	False	NA	19	True	AGTAAA	-16	NA	32616419	32650096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616442_32616600_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914
ES.25723.19	chr5	+	2973	9	NNC	ENSMUSG00000014956.16	novel	2347	9	NA	NA	-75	955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	450.194055380566	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTTGTCACTGTTTTT	2929	False	NA	8	True	AATAAA	-17	NA	32616420	32651055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297_32648399_32649341
ES.25723.2	chr5	+	2966	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	121	2875	121	-108	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGTTCTTTAAAATGCA	2816	False	NA	-85	True	NA	NA	NA	32616307	32649992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.20	chr5	+	2454	5	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-75	-4	intron_retention	FALSE	canonical	0	0	junction_1	661.126831629151	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGTCTGAGTGATTATT	2929	False	NA	19	True	AGTAAA	-16	NA	32616420	32650096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32638117_32638265_32640703_32640809_32642602_32642675_32648297
ES.25723.21	chr5	+	3624	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-69	956	intron_retention	FALSE	canonical	3	48	junction_5	515.46545956058	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTGTCACTGTTTTTG	2935	False	NA	9	True	AATAAA	-18	NA	32616426	32651056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32648297
ES.25723.23	chr5	+	2228	4	FSM	ENSMUSG00000014956.16	ENSMUST00000202078.2	383	4	-130	-1715	-60	-2	multi-exon	FALSE	canonical	0	0	junction_1	632.928291532479	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2944	False	NA	21	True	AGTAAA	-18	NA	32616435	32650098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32640769_32640809_32642602_32642675_32648297
ES.25723.24	chr5	+	2647	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	48	junction_5	515.46545956058	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2954	False	NA	21	True	AGTAAA	-18	NA	32616445	32650098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32648297
ES.25723.25	chr5	+	1495	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	259	4208	-50	276	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATCACAGTTTTTAAAG	2954	False	NA	NA	False	ATTAAA	-37	NA	32616445	32648659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.26	chr5	+	2203	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	260	3499	-49	-732	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTGGATAGCTGGC	2955	False	NA	NA	False	NA	NA	NA	32616446	32649368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.27	chr5	+	2920	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-49	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	614.524172985631	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	2955	False	NA	17	True	AGTAAA	-14	NA	32616446	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616745_32635409_32635542_32638033_32638263_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.28	chr5	+	2497	6	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	8	-6	intron_retention	FALSE	canonical	0	0	junction_1	636.573200818256	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	3012	False	NA	17	True	AGTAAA	-14	NA	32616503	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635497_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32648297
ES.25723.29	chr5	+	3139	9	NNC	ENSMUSG00000014956.16	novel	2347	9	NA	NA	8	-6	intron_retention	FALSE	canonical	0	0	junction_7	586.805973043901	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	3012	False	NA	17	True	AGTAAA	-14	NA	32616503	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32645246_32645514_32648297
ES.25723.3	chr5	+	3988	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	164	1810	-145	957	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTCACTGTTTTTGT	2859	False	NA	10	True	AATAAA	-19	NA	32616350	32651057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.31	chr5	+	3327	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	17	-6	intron_retention	FALSE	canonical	0	0	junction_7	475.389378535627	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACGTCTGAGTGATTA	3021	False	NA	17	True	AGTAAA	-14	NA	32616512	32650094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645514_32648297
ES.25723.32	chr5	+	2827	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	475.641736209607	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	3039	False	NA	21	True	AGTAAA	-18	NA	32616530	32650098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640787_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.33	chr5	+	2663	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	24	-2	intron_retention	FALSE	canonical	0	0	junction_1	475.389378535627	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	3098	False	NA	21	True	AGTAAA	-18	NA	32616589	32650098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616625_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.38	chr5	+	2597	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	126	-5	intron_retention	FALSE	canonical	0	0	junction_1	475.389378535627	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGTCTGAGTGATTAT	3200	False	NA	18	True	AGTAAA	-15	NA	32616691	32650095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635497_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.39	chr5	+	1591	1	Intergenic	novelGene_21402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1042	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTAGCAAGGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	32630060	32631651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32630100_32631700
ES.25723.4	chr5	+	2550	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-95	-2	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTGAGTGATTATTCT	2909	False	NA	21	True	AGTAAA	-18	NA	32616400	32650098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.40	chr5	+	2627	7	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	19222	2771	-30	-4	3prime_fragment	FALSE	canonical	3	1274	junction_1	55.1956117418365	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGTCTGAGTGATTATT	NA	False	NA	19	True	AGTAAA	-16	NA	32635408	32650096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25723.5	chr5	+	6224	7	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	215	2771	-94	-4	intron_retention	FALSE	canonical	3	1274	junction_2	55.1956117418365	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGTCTGAGTGATTATT	2910	False	NA	19	True	AGTAAA	-16	NA	32616401	32650096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914
ES.25723.7	chr5	+	2926	8	NNC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-91	0	intron_retention	FALSE	canonical	1	9	junction_2	476.771198280899	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	2913	False	NA	23	True	AGTAAA	-20	NA	32616404	32650100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32616752_32635409_32635542_32638084_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ES.25724.1	chr5	+	3499	1	Antisense	novelGene_ENSMUSG00000085234.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTCATGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	32665354	32668853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_32665400_32668900
ES.25725.1	chr5	+	195	1	Intergenic	novelGene_21403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGTTAAAAATCATAAGGA	NA	False	NA	NA	False	NA	NA	NA	32669904	32670099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32669900_32670100
ES.25726.1	chr5	+	199	1	Intergenic	novelGene_21404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCCTTACAAGA	NA	False	NA	NA	False	NA	NA	NA	32694399	32694598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32694400_32694600
ES.25727.1	chr5	+	169	1	Intergenic	novelGene_21405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGCAACTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	32703299	32703468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32703300_32703500
ES.25728.1	chr5	-	177	1	Intergenic	novelGene_21406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	32712791	32712614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32712600_32712800
ES.25729.1	chr5	+	191	1	Intergenic	novelGene_21407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAACAATTCCAG	4336	False	NA	NA	False	NA	NA	NA	32750871	32751062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32750900_32751100
ES.2573.1	chr10	-	179	1	Intergenic	novelGene_1950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	34129969	34129790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34129800_34130000
ES.25730.1	chr5	+	172	1	Antisense	novelGene_ENSMUSG00000107277.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32766131	32766303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_32766100_32766300
ES.25731.1	chr5	+	4135	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-277	2	intron_retention	FALSE	canonical	1	5	junction_1	225.849104894879	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTCTTTTCTGTTGC	NA	False	NA	10	True	AATAAA	-20	NA	32768237	32844403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768439_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.10	chr5	+	4593	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-34	-1902	-34	422	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATTTTCGGTACTGTA	NA	False	NA	NA	False	AATAAA	-26	NA	32768480	32844823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.100	chr5	+	4384	15	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6085	-2	intron_retention	FALSE	canonical	0	0	junction_1	342.936605374991	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATGTATTCTTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	32774763	32844399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32792180_32792235_32792740_32792893_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.101	chr5	+	3555	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6088	-362	intron_retention	FALSE	canonical	1	1	junction_1	344.843670414281	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGCAGAAAAATTGATGG	NA	False	NA	NA	False	AATAAA	-33	NA	32774766	32844039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32775835_32775893_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.102	chr5	+	4442	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6104	418	intron_retention	FALSE	canonical	3	45	junction_1	214.878516514574	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTATCATTTTCGGTAC	NA	False	NA	NA	False	AATAAA	-22	NA	32774782	32844819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.103	chr5	+	4134	11	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6105	218	intron_retention	FALSE	non_canonical	0	0	junction_1	312.492175902054	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGCAAATACAGTTACT	NA	False	NA	NA	False	AGTAAA	-19	NA	32774783	32844619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774845_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32818095_32818250_32821612_32821745_32841894
ES.25731.104	chr5	+	3981	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6111	0	intron_retention	FALSE	canonical	0	0	junction_5	292.066249701803	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774789	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810375_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.105	chr5	+	4607	3	Intergenic	novelGene_21410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	797	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAGAAGATAGAGA	NA	False	NA	NA	False	NA	NA	NA	32777041	32782114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32778765_32778965_32781421_32781685
ES.25731.106	chr5	+	177	1	Intergenic	novelGene_21411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	792	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATATTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	32778779	32778956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32778800_32779000
ES.25731.107	chr5	+	6770	16	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-10970	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	387.383817708255	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32785904	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32786981_32788844_32789087_32790284_32791533_32792014_32792096_32793049_32793187_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32818095_32818250_32821612_32821745_32841894
ES.25731.108	chr5	+	6084	16	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-7057	0	intron_retention	FALSE	canonical	0	0	junction_2	372.843035188924	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32789817	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32791533_32792014_32792096_32792149_32792235_32793049_32793187_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.109	chr5	+	5792	15	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-6900	-1	intron_retention	FALSE	canonical	0	0	junction_2	342.823867432874	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32789974	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32791533_32792014_32792096_32792149_32792235_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.11	chr5	+	4354	11	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-26	2	intron_retention	FALSE	canonical	2	4	junction_1	237.141729773568	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTCTTTTCTGTTGC	NA	False	NA	10	True	AATAAA	-20	NA	32768488	32844403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32769182_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.110	chr5	+	5344	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-5918	-3	intron_retention	FALSE	canonical	0	0	junction_1	282.940806530271	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32790956	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32792235_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.111	chr5	+	4091	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-4802	-1	intron_retention	FALSE	canonical	0	0	junction_1	282.940806530271	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32792072	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32792096_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.112	chr5	+	4932	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-4690	-2	intron_retention	FALSE	canonical	3	33	junction_1	218.163976543235	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATGTATTCTTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	32792184	32844399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.113	chr5	+	4123	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-3770	-1	intron_retention	FALSE	canonical	0	0	junction_8	331.407184928484	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32793104	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816156_32816267_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.114	chr5	+	6777	11	ISM	ENSMUSG00000014932.16	ENSMUST00000168707.6	2259	13	26151	0	-2045	0	intron_retention	FALSE	canonical	3	692	junction_7	69.2445665738475	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32794829	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.115	chr5	+	6772	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-1909	0	intron_retention	FALSE	canonical	2	8	junction_8	297.869043275982	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32794965	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32815065_32815197_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.116	chr5	+	6244	10	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-1617	-1	intron_retention	FALSE	canonical	1	2	junction_3	248.491647274978	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32795257	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32797948_32802351_32802452_32809000_32809100_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.117	chr5	+	4187	11	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	568	-7	intron_retention	FALSE	canonical	1	2	junction_4	354.033910805166	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCATCTATGTATTCTT	NA	False	NA	1	True	AATAAA	-11	NA	32797442	32844394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.118	chr5	+	5837	11	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	990	0	intron_retention	FALSE	canonical	0	0	junction_1	238.294020067647	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32797864	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32800043_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.119	chr5	+	3886	1	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	3544	-6223	mono-exon	FALSE	NA	NA	NA	NA	NA	811	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAAGAACTGCTGT	NA	False	NA	NA	False	NA	NA	NA	32800418	32804304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32800400_32804300
ES.25731.12	chr5	+	4237	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-26	0	intron_retention	FALSE	canonical	2	2	junction_1	270.751872364512	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768488	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32769107_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.120	chr5	+	3656	10	ISM	ENSMUSG00000014932.16	ENSMUST00000168707.6	2259	13	33670	6	5474	-6	intron_retention	FALSE	canonical	3	692	junction_6	69.9530706886083	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATCTATGTATTCTTT	NA	False	NA	2	True	AATAAA	-12	NA	32802348	32844395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.121	chr5	+	3864	7	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	13116	-2	intron_retention	FALSE	canonical	3	692	junction_3	79.2064812162911	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATGTATTCTTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	32809990	32844399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.122	chr5	+	3159	6	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	13666	-1	intron_retention	FALSE	canonical	0	0	junction_1	313.893994845394	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32810540	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32810651_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.124	chr5	+	5537	3	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	18474	-3	intron_retention	FALSE	canonical	3	786	junction_1	45.5	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32815348	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32818250_32821612_32821745_32841894
ES.25731.125	chr5	+	9656	2	Genic_Genomic	ENSMUSG00000014932.16	novel	2657	12	NA	NA	31470	-1	multi-exon	TRUE	canonical	0	0	junction_1	0	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32828344	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_32831745_32838144
ES.25731.126	chr5	+	172	1	Intergenic	novelGene_21415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAATGGACTT	7545	False	NA	NA	False	NA	NA	NA	32845646	32845818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32845600_32845800
ES.25731.127	chr5	+	399	1	Intergenic	novelGene_21417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCAAAAAAAAAAAAAAAGA	9004	False	NA	NA	False	NA	NA	NA	32918348	32918747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32918300_32918700
ES.25731.128	chr5	+	171	1	Intergenic	novelGene_21418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	32924832	32925003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32924800_32925000
ES.25731.129	chr5	+	1801	1	Intergenic	novelGene_21419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGGAGACAGAAGCTCT	NA	False	NA	NA	False	NA	NA	NA	32927348	32929149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32927300_32929100
ES.25731.13	chr5	+	4125	12	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_5	228.312928649321	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768490	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810375_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.130	chr5	+	171	1	Intergenic	novelGene_21420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	32952042	32952213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32952000_32952200
ES.25731.131	chr5	+	177	1	Intergenic	novelGene_21423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	32964107	32964284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32964100_32964300
ES.25731.15	chr5	+	4711	11	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	102	junction_1	208.936952212863	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768491	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.16	chr5	+	4647	13	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	7	junction_9	317.263910473424	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768494	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32817128_32817158_32818095_32818250_32821612_32821745_32841894
ES.25731.17	chr5	+	4240	14	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-18	130587	intron_retention	FALSE	non_canonical	0	0	junction_12	277.65026317123	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCACAAAACCAAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	32768496	32974988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32844402_32943915_32943959_32974946
ES.25731.18	chr5	+	4049	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	287.982300767869	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768496	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812598_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32843586_32843683
ES.25731.19	chr5	+	4751	13	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	7	junction_3	318.971132445137	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768496	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.2	chr5	+	4069	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	-198	-3	intron_retention	FALSE	canonical	0	0	junction_1	227.224103889596	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32768316	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768457_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.21	chr5	+	4579	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	22	junction_8	303.568707214693	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768500	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32817158_32818095_32818250_32821612_32821745_32841894
ES.25731.22	chr5	+	4240	11	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	599	junction_1	83.6119608668521	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768500	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.23	chr5	+	4400	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-14	-1729	-14	249	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTTGGTGTTTTGAGT	NA	False	NA	NA	False	AATACA	-18	NA	32768500	32844650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.24	chr5	+	5030	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-26	-418	-13	418	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTATCATTTTCGGTAC	NA	False	NA	NA	False	AATAAA	-22	NA	32768501	32844819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.25	chr5	+	4024	12	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_7	228.489217062971	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768501	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812566_32812857_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.26	chr5	+	4283	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	7	junction_3	284.416495751487	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768501	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.27	chr5	+	5467	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-25	-856	-12	856	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGTTTATGCTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32768502	32845257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.28	chr5	+	4804	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_1	227.224103889596	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768504	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769377_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.29	chr5	+	4139	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	227.224103889596	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768504	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797681_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.3	chr5	+	4798	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-210	-2	-197	2	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTCTTTTCTGTTGC	NA	False	NA	10	True	AATAAA	-20	NA	32768317	32844403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.30	chr5	+	4060	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_1	227.224103889596	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768504	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768633_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.32	chr5	+	4168	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7	junction_9	282.524962024007	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768512	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32817128_32817158_32818095_32818250_32821612_32821745_32841894
ES.25731.33	chr5	+	10058	10	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	1	855	intron_retention	FALSE	canonical	3	599	junction_1	86.1249451253207	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATAGTTTATGCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32768515	32845256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32818250_32821612_32821745_32841894
ES.25731.34	chr5	+	3887	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	3	-3	intron_retention	FALSE	canonical	3	7	junction_8	338.898044104006	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32768517	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32817128_32817158_32818095_32818250_32821612_32821745_32841894
ES.25731.35	chr5	+	5774	11	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	599	junction_1	83.551421292519	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768517	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32818250_32821612_32821745_32841894
ES.25731.36	chr5	+	4165	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_2	297.45874080171	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32768517	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.37	chr5	+	4034	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	218.922677877119	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768517	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32842834_32842933
ES.25731.38	chr5	+	3717	10	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_5	367.192047844176	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTATTCTTTTCTGTTG	NA	False	NA	9	True	AATAAA	-19	NA	32768518	32844402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810500_32810651_32812449_32812566_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.39	chr5	+	4093	12	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_7	228.489217062971	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768518	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812566_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.4	chr5	+	4322	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-181	-1484	-181	4	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTTTTCTGTTGCTC	NA	False	NA	12	True	AATAAA	-22	NA	32768333	32844405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.40	chr5	+	4537	13	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	271.144219005311	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32768518	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32843056_32843110
ES.25731.41	chr5	+	4056	11	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	4	0	intron_retention	FALSE	canonical	2	9	junction_8	236.902279431837	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768518	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32818095_32818250_32821612_32821745_32841894
ES.25731.42	chr5	+	4003	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	227.224103889596	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768518	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768591_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.43	chr5	+	3727	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	218.922677877119	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768519	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32842717_32843121
ES.25731.44	chr5	+	4556	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_5	282.042637887921	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATGTATTCTTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	32768519	32844399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810375_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.45	chr5	+	4267	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_1	282.754445391914	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768520	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.46	chr5	+	4711	11	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-6	854	intron_retention	FALSE	canonical	3	32	junction_1	229.089414858042	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATAGTTTATGCTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	32768521	32845255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.47	chr5	+	2468	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	-4	2122	-4	-642	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGCATCTTACAGCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	32768523	32842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.5	chr5	+	3471	9	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-169	-1	intron_retention	FALSE	canonical	0	0	junction_1	345.427972774354	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768345	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768439_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.50	chr5	+	3764	9	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_8	252.015097514018	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768523	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32841894
ES.25731.51	chr5	+	4446	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	4	junction_1	344.701835463493	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32768525	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.52	chr5	+	4331	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	271.144219005311	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768529	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32768971_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.53	chr5	+	4007	11	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	7	junction_2	237.595138839161	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768543	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.54	chr5	+	2628	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	29	0	2	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATAAAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	32768543	32842921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.55	chr5	+	4132	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	7	-1	intron_retention	FALSE	canonical	1	2	junction_5	338.002909665211	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768548	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.56	chr5	+	3674	10	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	17	-6	intron_retention	FALSE	canonical	0	0	junction_5	328.464140140175	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATCTATGTATTCTTT	NA	False	NA	2	True	AATAAA	-12	NA	32768558	32844395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812566_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.57	chr5	+	3822	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	299.66005532992	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768558	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812857_32818141_32818182_32818233_32818250_32821612_32821745_32841894
ES.25731.58	chr5	+	4181	10	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_1	251.081660023188	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768559	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32769182_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.59	chr5	+	5372	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	19	855	intron_retention	FALSE	canonical	0	0	junction_5	282.042637887921	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATAGTTTATGCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32768560	32845256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810375_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.6	chr5	+	3977	11	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-113	0	intron_retention	FALSE	canonical	3	32	junction_1	229.089414858042	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768401	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.61	chr5	+	4025	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	218.922677877119	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTATGTATTCTTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	32768563	32844399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32843077_32843137
ES.25731.62	chr5	+	3856	10	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_8	249.369625007825	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768563	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32821612_32821745_32841894
ES.25731.63	chr5	+	4679	13	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	32	2	intron_retention	FALSE	canonical	2	3	junction_1	282.382165690399	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTCTTTTCTGTTGC	NA	False	NA	10	True	AATAAA	-20	NA	32768573	32844403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.64	chr5	+	3754	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	42	-1	intron_retention	FALSE	canonical	0	0	junction_6	308.250871856026	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768583	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812566_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.65	chr5	+	3895	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	43	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	299.66005532992	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768584	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812930_32818119_32818185_32818232_32818250_32821612_32821745_32841894
ES.25731.66	chr5	+	4164	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	54	-1	intron_retention	FALSE	canonical	1	5	junction_1	287.039619313355	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32768595	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32768720_32784744_32784854_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.67	chr5	+	4927	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	222	853	intron_retention	FALSE	canonical	2	4	junction_1	344.701835463493	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTATAGTTTATGCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	32768900	32845254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.68	chr5	+	3895	11	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	435	-1	intron_retention	FALSE	canonical	1	2	junction_4	291.738650164835	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32769113	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.69	chr5	+	4001	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1951	0	intron_retention	FALSE	canonical	2	22	junction_1	221.180043336301	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32770629	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770699_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.7	chr5	+	3847	10	NIC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	-83	0	intron_retention	FALSE	canonical	2	7	junction_1	248.962489117647	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768431	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_32768720_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.70	chr5	+	4045	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1952	-1	intron_retention	FALSE	canonical	1	5	junction_1	225.849104894879	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32770630	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770745_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.71	chr5	+	4294	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1953	249	intron_retention	FALSE	canonical	1	5	junction_1	225.849104894879	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTTGGTGTTTTGAGT	NA	False	NA	NA	False	AATACA	-18	NA	32770631	32844650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770745_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.72	chr5	+	3620	10	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	1953	-6	intron_retention	FALSE	canonical	0	0	junction_1	251.081660023188	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATCTATGTATTCTTT	NA	False	NA	2	True	AATAAA	-12	NA	32770631	32844395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770699_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.73	chr5	+	3726	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	1953	0	intron_retention	FALSE	canonical	1	2	junction_1	237.717815907853	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32770631	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770699_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.74	chr5	+	3849	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	1964	0	intron_retention	FALSE	canonical	1	2	junction_1	344.996562445445	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32770642	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770699_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.75	chr5	+	4120	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1966	-3	intron_retention	FALSE	canonical	0	0	junction_1	282.940806530271	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32770644	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770699_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.76	chr5	+	3756	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	1968	-1	intron_retention	FALSE	canonical	0	0	junction_1	238.294020067647	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32770646	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32770745_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.77	chr5	+	4218	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	4174	-3	intron_retention	FALSE	canonical	0	0	junction_1	227.224103889596	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32772852	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32773142_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.78	chr5	+	4086	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6042	0	intron_retention	FALSE	canonical	3	45	junction_1	214.878516514574	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774720	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.79	chr5	+	3789	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	6044	-1	intron_retention	FALSE	canonical	0	0	junction_1	238.294020067647	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774722	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774854_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.8	chr5	+	5069	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	-76	-2336	-76	856	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGTTTATGCTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32768438	32845257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.80	chr5	+	4155	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6044	-3	intron_retention	FALSE	canonical	0	0	junction_1	287.950323647828	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32774722	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32784744_32784854_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.81	chr5	+	4043	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6064	0	intron_retention	FALSE	canonical	2	18	junction_1	222.27780250759	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774742	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774854_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.82	chr5	+	2369	3	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6064	-6191	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	339.5	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACAGTGGGTGATTCA	NA	False	NA	NA	False	NA	NA	NA	32774742	32804336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774854_32797674_32797948_32802351
ES.25731.83	chr5	+	4878	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6070	855	intron_retention	FALSE	canonical	0	0	junction_1	227.224103889596	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATAGTTTATGCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32774748	32845256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.84	chr5	+	5075	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6070	-1	intron_retention	FALSE	canonical	1	9	junction_1	224.749667904405	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774748	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32775893_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.85	chr5	+	5263	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6071	-1	intron_retention	FALSE	canonical	0	0	junction_1	288.857555726001	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774749	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32775893_32788897_32789087_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.87	chr5	+	3745	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	6074	-1	intron_retention	FALSE	canonical	0	0	junction_1	238.294020067647	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774752	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.88	chr5	+	4153	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6074	-3	intron_retention	FALSE	canonical	0	0	junction_1	282.940806530271	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32774752	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.89	chr5	+	2824	1	Intergenic	novelGene_21408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	759	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCAACACACTCCCACT	NA	False	NA	NA	False	NA	NA	NA	32774752	32777576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32774800_32777600
ES.25731.9	chr5	+	2310	12	NNC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	-69	11784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	323.610826367334	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTTTCATGCCATT	NA	False	NA	NA	False	NA	NA	NA	32768445	32822311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812938_32816376_32816456_32818095_32818250_32821612_32821745_32822150
ES.25731.90	chr5	+	3952	11	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	-1	intron_retention	FALSE	canonical	3	7	junction_2	304.40251313023	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774753	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32797674_32797948_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.91	chr5	+	4017	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	-1	intron_retention	FALSE	canonical	0	0	junction_1	227.224103889596	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774753	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.92	chr5	+	6633	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	0	intron_retention	FALSE	canonical	0	0	junction_1	333.593315280747	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774753	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32777324_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32815065_32815197_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.93	chr5	+	4238	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	0	intron_retention	FALSE	canonical	0	0	junction_2	335.859180146812	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774753	32844401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32788897_32789087_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816382_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.94	chr5	+	3779	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	6075	-1	intron_retention	FALSE	canonical	1	4	junction_1	237.141729773568	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774753	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.95	chr5	+	4112	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	2	intron_retention	FALSE	canonical	1	1	junction_1	287.044264395271	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATTCTTTTCTGTTGC	NA	False	NA	10	True	AATAAA	-20	NA	32774753	32844403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32775835_32775893_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.96	chr5	+	3851	11	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	-1	intron_retention	FALSE	canonical	2	14	junction_7	308.291177298346	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774753	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774854_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25731.97	chr5	+	3943	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6077	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.857555726001	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32774755	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774840_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894_32843648_32843717
ES.25731.98	chr5	+	3806	12	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	6077	-1	intron_retention	FALSE	canonical	1	4	junction_1	342.96844661266	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTATTCTTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	32774755	32844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32817128_32817158_32818095_32818250_32821612_32821745_32841894
ES.25731.99	chr5	+	4180	13	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6082	-3	intron_retention	FALSE	canonical	2	2	junction_1	282.568231681404	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTATGTATTCTTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	32774760	32844398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_32774875_32793049_32793187_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ES.25732.1	chr5	+	1891	1	Intergenic	novelGene_21428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAACCAAAGATACTGG	527	False	NA	NA	False	NA	NA	NA	32979670	32981561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32979700_32981600
ES.25733.1	chr5	+	182	1	Intergenic	novelGene_21429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAAAAG	2538	False	NA	NA	False	NA	NA	NA	32981681	32981863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32981700_32981900
ES.25733.2	chr5	+	298	1	Intergenic	novelGene_21430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATTAGATCAAAA	2538	False	NA	NA	False	AATAGA	-10	NA	32981681	32981979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_32981700_32982000
ES.25734.1	chr5	+	1562	1	Antisense	novelGene_ENSMUSG00000054280.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTGGGGGGACTAGAG	NA	False	NA	NA	False	NA	NA	NA	33008736	33010298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_33008700_33010300
ES.25735.1	chr5	+	204	1	Intergenic	novelGene_21431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATATG	NA	False	NA	NA	False	NA	NA	NA	33012823	33013027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33012800_33013000
ES.25736.1	chr5	-	2617	1	FSM	ENSMUSG00000107277.2	ENSMUST00000202073.2	4786	1	116	2053	116	-2053	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCCTGGTAATGAGTTT	NA	False	NA	NA	False	AATAAA	-33	NA	32769033	32766416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32766400_32769000
ES.25737.1	chr5	-	1911	1	Intergenic	novelGene_21409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATACATTTTATTTTT	8056	False	NA	NA	False	AATAAA	-33	NA	32777572	32775661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32775700_32777600
ES.25738.1	chr5	-	178	2	Antisense	novelGene_ENSMUSG00000014932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAATGTTCCAA	1317	False	NA	NA	False	NA	NA	NA	32784311	32783109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_32783166_32784189
ES.25738.2	chr5	-	176	1	Intergenic	novelGene_21412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAATGTTCCAA	2343	False	NA	NA	False	NA	NA	NA	32783285	32783109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32783100_32783300
ES.25739.1	chr5	-	4638	1	Antisense	novelGene_ENSMUSG00000014932.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAATCCTAACAAGTT	NA	False	NA	NA	False	ACTAAA	-14	NA	32799230	32794592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_32794600_32799200
ES.25739.2	chr5	-	1076	1	Intergenic	novelGene_21413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAACTAAAAATTTGAG	NA	False	NA	NA	False	NA	NA	NA	32799229	32798153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32798200_32799200
ES.2574.1	chr10	-	174	1	Intergenic	novelGene_1951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	34141268	34141094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34141100_34141300
ES.25740.1	chr5	-	1018	1	Intergenic	novelGene_21414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTTCCTTTGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	32841525	32840507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32840500_32841500
ES.25741.1	chr5	-	2912	1	Intergenic	novelGene_21416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCTAATAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	32859292	32856380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32856400_32859300
ES.25742.1	chr5	-	2593	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	22	-432	2	432	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	32942968	32893212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.10	chr5	-	2695	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	685	junction_1	57.3953153334157	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942992	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.11	chr5	-	2289	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	2	32	junction_5	306.610909786328	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942951	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32922116_32922293_32931739_32931811_32942892
ES.25742.14	chr5	-	1902	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	280.261633716307	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942967	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32922116_32922293_32931739_32931811_32942892
ES.25742.16	chr5	-	1995	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	279.926428826496	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942984	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.17	chr5	-	3142	5	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	685	junction_1	61.4247507117449	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942982	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.18	chr5	-	2249	9	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	309.516937137534	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942986	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32941984_32942076_32942892
ES.25742.19	chr5	-	3848	4	NIC	ENSMUSG00000023452.20	novel	2491	9	NA	NA	-32	0	intron_retention	FALSE	canonical	3	10	junction_3	324.251274305729	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	7942	False	NA	NA	False	NA	NA	NA	32899711	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895879_32896125_32898134_32899553
ES.25742.2	chr5	-	3839	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	3	1	intron_retention	FALSE	canonical	1	2	junction_6	317.955160950408	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32942967	32893647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32898134_32899553_32899820_32922116_32922293_32931739_32931811_32942892
ES.25742.20	chr5	-	2406	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	319.447178732259	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942968	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32899553_32899820_32922116_32922293_32931739_32931811_32942892
ES.25742.21	chr5	-	2237	8	NIC	ENSMUSG00000023452.20	novel	2084	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_7	329.837931755112	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942970	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32922116_32922293_32942892
ES.25742.23	chr5	-	3317	3	NIC	ENSMUSG00000023452.20	novel	2084	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	16	junction_2	336.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942981	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32896718_32922116_32922293_32942892
ES.25742.24	chr5	-	2597	6	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	685	junction_2	57.0038595184572	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942968	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.25	chr5	-	1197	9	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.173917862402	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942966	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32893788_32894728_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.26	chr5	-	1730	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	-9	462	-9	-339	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTATCCTGGGCTCT	NA	False	NA	0	True	AGTAAA	-19	NA	32942999	32894106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.27	chr5	-	1669	8	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	2	-339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	261.052109896918	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTATCCTGGGCTCT	NA	False	NA	0	True	AGTAAA	-19	NA	32942968	32894106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896510_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.28	chr5	-	1856	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	8	-342	combination_of_known_splicesites	FALSE	canonical	2	32	junction_5	306.610909786328	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGTGTTATCCTGGGC	NA	False	NA	-3	True	AGTAAA	-16	NA	32942962	32894109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32922116_32922293_32931739_32931811_32942892
ES.25742.29	chr5	-	4555	1	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	4	-16835	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGCTGGAGGCC	NA	False	NA	NA	False	NA	NA	NA	32942966	32938411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32938400_32943000
ES.25742.3	chr5	-	2203	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	-23	3	-23	1	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32943013	32893647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.30	chr5	-	10466	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-10	614	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTCCATTCTTTTTAT	7043	False	NA	0	True	AATAAA	-33	NA	33011610	32946549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.31	chr5	-	9906	9	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-1	602	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	40.2670771226321	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATTGTATTAGAGTC	7070	False	NA	-12	True	AATAAA	-21	NA	33011583	32946561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
ES.25742.32	chr5	-	10562	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	-2	-601	-2	601	multi-exon	FALSE	canonical	3	28	junction_10	39.1414102965133	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTATTGTATTAGAGT	7051	False	NA	-13	True	AATAAA	-20	NA	33011602	32946562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.33	chr5	-	11084	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-94	599	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	44.2244276390323	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTTATTGTATTAGA	6959	False	NA	-15	True	AATAAA	-18	NA	33011694	32946564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011004
ES.25742.34	chr5	-	5188	6	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	9	597	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	50.1701106237568	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTTTTATTGTATTA	7062	False	NA	-17	True	AATAAA	-16	NA	33011591	32946566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_33011436
ES.25742.35	chr5	-	10798	12	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-132	595	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	50.2070094872508	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAGTTTTTATTGTAT	6921	False	NA	-19	True	AATAAA	-14	NA	33011732	32946568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33002023_33002136_33009225_33009343_33011436
ES.25742.36	chr5	-	9918	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAAGGCTATTTTGTTC	6977	False	NA	5	True	AATAAA	-26	NA	33011676	32947163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.37	chr5	-	10066	12	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.7068873801686	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7070	False	NA	0	True	AATAAA	-21	NA	33011583	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_32995457_32995587_33001387_33001909_33009225_33009343_33011436
ES.25742.38	chr5	-	9999	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	-45	5	-45	-5	multi-exon	FALSE	canonical	3	28	junction_10	39.1414102965133	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7008	False	NA	0	True	AATAAA	-21	NA	33011645	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.39	chr5	-	9925	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.3963561409139	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7073	False	NA	0	True	AATAAA	-21	NA	33011580	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33002023_33002132_33011436
ES.25742.4	chr5	-	2607	9	FSM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	4	-120	4	1	multi-exon	FALSE	canonical	0	0	junction_7	341.576286318298	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	4001	False	NA	NA	False	ATTAAA	-16	NA	32903652	32893647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32899553_32899820_32902812_32903027_32903526
ES.25742.41	chr5	-	9392	9	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-76	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	40.2670771226321	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	6977	False	NA	0	True	AATAAA	-21	NA	33011676	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
ES.25742.42	chr5	-	10457	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-132	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	57.4121938267473	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	6921	False	NA	0	True	AATAAA	-21	NA	33011732	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993555_32995457_32995587_33001387_33001909_33011599
ES.25742.43	chr5	-	10026	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.0088881574135	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTGTCAAGGCTATTT	7060	False	NA	0	True	AATAAA	-21	NA	33011593	32947168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979624_32984301_32988896_32989148_32989204_32989837_32989892_32992959_32993033_33001387_33001909_33011436
ES.25742.44	chr5	-	5108	7	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.9625451379224	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATTGTCAAGGCTATT	7060	False	NA	-1	True	AATAAA	-20	NA	33011593	32947169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_33001387_33001909_33011436
ES.25742.46	chr5	-	9484	10	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	40.4569577711766	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAATTGTCAAGGCTA	7019	False	NA	-3	True	AATAAA	-18	NA	33011634	32947171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001771_33001909_33011436
ES.25742.47	chr5	-	10266	10	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	39.9502777381838	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAATTGTCAAGGCT	7052	False	NA	-4	True	AATAAA	-17	NA	33011601	32947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011004
ES.25742.48	chr5	-	9623	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	50.4123992684339	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAATTGTCAAGGCT	7079	False	NA	-4	True	AATAAA	-17	NA	33011574	32947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32984851_32985036_32988896_32989148_32989205_32992959_32993033_33001387_33001909_33011436
ES.25742.49	chr5	-	10385	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	44.2244276390323	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAATTGTCAAGGCT	7050	False	NA	-4	True	AATAAA	-17	NA	33011603	32947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011004
ES.25742.5	chr5	-	5480	15	NNC	ENSMUSG00000093574.2	novel	1731	12	NA	NA	-2165	926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	311.200711202692	649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32986618	32893647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32899553_32899820_32922116_32922293_32931739_32931885_32951024_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301
ES.25742.51	chr5	-	7819	3	NNC	ENSMUSG00000054280.15	novel	2746	5	NA	NA	-6534	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.5	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATAATTGTCAAGGCT	NA	False	NA	-4	True	AATAAA	-17	NA	32959982	32947172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32956239
ES.25742.52	chr5	-	9995	12	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	8	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.988979591722	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGATAATTGTCAAGGC	7061	False	NA	-5	True	AATAAA	-16	NA	33011592	32947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32989837_32989892_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.53	chr5	-	9543	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.4498415712915	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGATAATTGTCAAGGC	7060	False	NA	-5	True	AATAAA	-16	NA	33011593	32947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32950369_32950650_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.54	chr5	-	10031	12	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-19	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.7639269398237	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGATAATTGTCAAGGC	7034	False	NA	-5	True	AATAAA	-16	NA	33011619	32947173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33003959_33004023_33009225_33009343_33011436
ES.25742.55	chr5	-	10062	10	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-2808	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.0945912754801	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAGATAATTGTCAAGG	4245	False	NA	-6	True	AATAAA	-15	NA	33014408	32947174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33014013
ES.25742.56	chr5	-	9229	8	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	8	-12	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	48.4022262938812	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCAGATAATTGTCAAG	7061	False	NA	-7	True	AATAAA	-14	NA	33011592	32947175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32984301_32988896_32989148_32989203_32992959_32993033_33011436
ES.25742.57	chr5	-	4246	3	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-9	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	62.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCAGATAATTGTCAAG	7044	False	NA	-7	True	AATAAA	-14	NA	33011609	32947175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_33011436
ES.25742.58	chr5	-	10035	12	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	50.2070094872508	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATTCAGATAATTGT	7073	False	NA	-11	True	AATAAA	-10	NA	33011580	32947179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33002023_33002136_33009225_33009343_33011436
ES.25742.59	chr5	-	10479	11	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	9	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.5078498913944	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATTCAGATAATTGT	7080	False	NA	-11	True	AATAAA	-10	NA	33011573	32947179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993555_33001387_33001909_33009225_33009384_33011436
ES.25742.6	chr5	-	5487	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	4	1	intron_retention	FALSE	canonical	1	2	junction_4	279.895615463257	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTAGCTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	32942979	32893647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32899820_32922116_32922293_32931739_32931811_32942892
ES.25742.60	chr5	-	7708	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-2	1186	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGTCCTTCACCTCCTC	7069	False	NA	NA	False	NA	NA	NA	33011584	32949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.61	chr5	-	7105	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-57	510	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAAGGTGGAGTGTGGG	6996	False	NA	NA	False	CATAAA	-30	NA	33011657	32949957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.62	chr5	-	6285	9	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-60	208	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	40.2670771226321	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTTTTTGTATTATT	6993	False	NA	NA	False	NA	NA	NA	33011660	32950259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
ES.25742.63	chr5	-	6532	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-3	9	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTTCTTGACTCT	7068	False	NA	NA	False	NA	NA	NA	33011585	32950458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.64	chr5	-	176	1	Intergenic	novelGene_21421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAATTAATTT	NA	False	NA	NA	False	NA	NA	NA	32956941	32956765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32956800_32956900
ES.25742.65	chr5	-	5010	1	FSM	ENSMUSG00000105429.2	ENSMUST00000198236.2	1062	1	-3793	-155	-3793	155	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32962102	32957092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32957100_32962100
ES.25742.66	chr5	-	4830	1	FSM	ENSMUSG00000105429.2	ENSMUST00000198236.2	1062	1	-3850	82	-3850	-82	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTCTGTTGAGATC	NA	False	NA	NA	False	NA	NA	NA	32962159	32957329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_32957300_32962200
ES.25742.67	chr5	-	5885	9	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	7	-6347	multi-exon	FALSE	canonical	0	0	junction_1	43.396248397759	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTCTGTTGAGATC	7060	False	NA	NA	False	NA	NA	NA	33011593	32957329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32957465_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.68	chr5	-	5321	8	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	5	-6374	multi-exon	FALSE	canonical	0	0	junction_1	56.0630111971324	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAGATTTAA	7076	False	NA	NA	False	NA	NA	NA	33011577	32957356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32957465_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33011436
ES.25742.69	chr5	-	5021	2	Intergenic	novelGene_21422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	32966302	32961038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32964102_32964344
ES.25742.7	chr5	-	2127	8	NNC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	261.052109896918	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942985	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896510_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.70	chr5	-	6516	7	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-904	-10532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.3459146661638	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTTTGAATCTATT	NA	False	NA	NA	False	NA	NA	NA	32986926	32961514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32964102_32964344_32965086_32965805_32966018_32977209_32977317_32977936_32978109_32979410_32979483_32984301
ES.25742.71	chr5	-	4816	6	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-82	-11198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.6402315657098	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCTCCATGATTTGT	NA	False	NA	NA	False	NA	NA	NA	32986104	32962180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32964102_32964344_32965086_32977209_32977317_32977936_32978109_32979410_32979483_32984301
ES.25742.72	chr5	-	8476	11	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	-3	-11264	multi-exon	FALSE	non_canonical	0	0	junction_1	54.2742111872665	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGGTGTCTGTGTTT	7050	False	NA	NA	False	ACTAAA	-19	NA	33011603	32962246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32964102_32964341_32965086_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.73	chr5	-	6973	10	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	7	-12637	multi-exon	FALSE	non_canonical	0	0	junction_1	51.0927503252905	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGAACTCCTGGATGAG	7060	False	NA	NA	False	NA	NA	NA	33011593	32963619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32964102_32964344_32965086_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.74	chr5	-	6768	11	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	-17	-12985	multi-exon	FALSE	canonical	0	0	junction_1	54.4128661255773	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGTTCCTGCTTAATAA	7036	False	NA	NA	False	TATAAA	-12	NA	33011617	32963967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32964102_32964345_32965089_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.75	chr5	-	6899	12	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	-20	-12985	multi-exon	FALSE	non_canonical	0	0	junction_1	61.1991735481388	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGTTCCTGCTTAATAA	7033	False	NA	NA	False	TATAAA	-12	NA	33011620	32963967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32964102_32964344_32965086_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001840_33009225_33009343_33011004_33011204_33011436
ES.25742.76	chr5	-	6275	9	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	-1	-13568	multi-exon	FALSE	canonical	3	4	junction_1	42.2327997532723	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTATTTATATGAATA	7070	False	NA	NA	False	NA	NA	NA	33011583	32964550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32965086_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.77	chr5	-	7198	9	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	1	-13575	multi-exon	FALSE	canonical	1	2	junction_1	42.8133667795468	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAATTATTTTATTTAT	7072	False	NA	NA	False	NA	NA	NA	33011581	32964557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32966018_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.78	chr5	-	6545	10	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	-8	-14354	multi-exon	FALSE	canonical	1	2	junction_1	50.4184955285064	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGAGTTTCTTGTGCT	7063	False	NA	NA	False	AGTAAA	-18	NA	33011590	32965336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32966018_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ES.25742.79	chr5	-	689	1	Intergenic	novelGene_21424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAATAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	32968223	32967534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32967500_32968200
ES.25742.8	chr5	-	2356	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	685	junction_2	55.9833804703582	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942968	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
ES.25742.80	chr5	-	7267	10	Fusion	ENSMUSG00000093574.2_ENSMUSG00000054280.15	novel	217	2	NA	NA	24	-16845	multi-exon	FALSE	canonical	0	0	junction_1	58.4036613092106	185	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	7095	False	NA	NA	False	NA	NA	NA	33011558	32967827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_32969272_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33002023_33002132_33011436
ES.25742.81	chr5	-	2026	1	Intergenic	novelGene_21425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAAGAAGGTGGAGG	NA	False	NA	NA	False	AAGAAA	-9	NA	32970390	32968364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32968400_32970400
ES.25742.82	chr5	-	2672	1	Intergenic	novelGene_21426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGTGTTGAAGCCAA	NA	False	NA	NA	False	TATAAA	-25	NA	32971260	32968588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32968600_32971300
ES.25742.83	chr5	-	3649	2	Intergenic	novelGene_21427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATAGTGAAGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	32974946	32968841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_32971372_32973827
ES.25742.84	chr5	-	5158	5	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	7	8419	combination_of_known_splicesites	FALSE	canonical	3	86	junction_4	14.456832294801	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGAACTTCTCCAGTAAT	7060	False	NA	NA	False	NA	NA	NA	33011593	32984542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
ES.25742.85	chr5	-	3280	4	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-63	-1582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2361043360417	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAAGTCTTGGCAGCTG	6990	False	NA	NA	False	AATAAA	-18	NA	33011663	32994543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_32996959_33001387_33001909_33009225_33009343_33011436
ES.25742.86	chr5	-	1434	3	NNC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	-48	-8274	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	14.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACTGCTGTGCTCTCA	7005	False	NA	NA	False	NA	NA	NA	33011648	33001235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33001909_33009225_33009343_33011004
ES.25742.87	chr5	-	1777	1	Genic_Genomic	ENSMUSG00000054280.15	novel	NA	NA	NA	NA	-75	-16937	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAACAAACCTTCCC	6978	False	NA	NA	False	NA	NA	NA	33011675	33009898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_33009900_33011700
ES.25742.9	chr5	-	2389	8	NIC	ENSMUSG00000023452.20	novel	2491	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	336.343968737545	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	3987	False	NA	NA	False	NA	NA	NA	32903666	32893665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32899553_32899820_32903526
ES.25743.1	chr5	+	155	1	Intergenic	novelGene_21432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAATAAACCTTA	NA	False	NA	NA	False	NA	NA	NA	33016863	33017018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33016900_33017000
ES.25744.1	chr5	+	5267	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-12	11	combination_of_known_junctions	TRUE	canonical	3	34	junction_7	34.5219929210486	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	1981	False	NA	18	True	AATAAA	-19	NA	33021032	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.10	chr5	+	5516	43	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.9392906121854	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCCCTCTC	2000	False	NA	12	True	AATAAA	-13	NA	33021051	33149010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022136_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.100	chr5	+	5547	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-9	-91	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	36.4349068030642	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTGTGTGTATGAGG	2043	False	NA	-91	True	NA	NA	NA	33021094	33148907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.101	chr5	+	6520	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-9	1151	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	31.4394642018125	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCCACTCCATTTAGA	2043	False	NA	NA	False	NA	NA	NA	33021094	33150156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.102	chr5	+	7026	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-8	-2249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.4718494066642	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTGCTGCTCCTTGTA	2044	False	NA	NA	False	AATAAA	-35	NA	33021095	33146749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33054612_33054695_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279
ES.25744.105	chr5	+	5525	44	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	41.255145376193	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2051	False	NA	16	True	AATAAA	-17	NA	33021102	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.107	chr5	+	5573	39	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	-6451	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	31.591927157042	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGATGTCAGAGAAATAT	2052	False	NA	NA	False	CATAAA	-15	NA	33021103	33142547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202
ES.25744.108	chr5	+	2674	25	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-3	3948	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.2548647671141	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTTGGTCAAGACATA	2059	False	NA	NA	False	TATAAA	-29	NA	33021110	33085472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021392_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188
ES.25744.109	chr5	+	5265	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	32.6487261900406	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2059	False	NA	16	True	AATAAA	-17	NA	33021110	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.110	chr5	+	6673	41	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-3	11	intron_retention	FALSE	non_canonical	0	0	junction_27	50.0916909277377	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2059	False	NA	18	True	AATAAA	-19	NA	33021110	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100571_33100696_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.111	chr5	+	5449	44	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	46.8984842019812	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2070	False	NA	18	True	AATAAA	-19	NA	33021121	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33147593_33147720_33148085_33148169_33148282
ES.25744.112	chr5	+	5588	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-148	11	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	27.1922691427874	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2299	False	NA	18	True	AATAAA	-19	NA	33021350	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.113	chr5	+	5242	42	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	28	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	37.4270180160385	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2475	False	NA	15	True	AATAAA	-16	NA	33021526	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33144274_33144341_33148085_33148169_33148282
ES.25744.114	chr5	+	5113	40	NNC	ENSMUSG00000037426.19	novel	5195	41	NA	NA	-14	13	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_34	44.187559719055	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2865	False	NA	20	True	AATAAA	-21	NA	33021916	33149018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132699_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.115	chr5	+	5283	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	42.6104332111445	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCT	2865	False	NA	11	True	AATAAA	-12	NA	33021916	33149009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095053_33095491_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.116	chr5	+	4906	39	NNC	ENSMUSG00000037426.19	novel	5195	41	NA	NA	-14	-4153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	47.8452028410691	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATGGATGGTTTTGA	2865	False	NA	NA	False	AGTAAA	-18	NA	33021916	33144845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032711_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075486_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279
ES.25744.117	chr5	+	5308	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.8849008976581	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCT	2865	False	NA	11	True	AATAAA	-12	NA	33021916	33149009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032713_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061119_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.118	chr5	+	5095	40	NIC	ENSMUSG00000037426.19	novel	5195	41	NA	NA	-12	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	38.4159901235529	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2867	False	NA	16	True	AATAAA	-17	NA	33021918	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.119	chr5	+	5156	41	ISM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	4239	2563	3386	7	3prime_fragment	FALSE	canonical	3	124	junction_23	20.7038039982994	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	6265	False	NA	14	True	AATAAA	-15	NA	33025316	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.12	chr5	+	5253	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	16	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	32.536676783431	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCTCTCCCTCCCCCG	2004	False	NA	23	True	AATAAA	-24	NA	33021055	33149021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.120	chr5	+	5091	40	ISM	ENSMUSG00000037426.19	ENSMUST00000120902.8	5195	41	3386	-8	3386	8	3prime_fragment	FALSE	canonical	3	49	junction_30	27.8366844171956	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	6265	False	NA	15	True	AATAAA	-16	NA	33025316	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.121	chr5	+	4817	37	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-17262	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	44.1587693848034	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	NA	False	NA	14	True	AATAAA	-15	NA	33044368	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33092884_33092948_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.122	chr5	+	5343	25	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	6217	8	intron_retention	FALSE	non_canonical	0	0	junction_7	42.0574177629689	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	5930	False	NA	15	True	AATAAA	-16	NA	33067847	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085286_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.123	chr5	+	158	1	Intergenic	novelGene_21438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAATGTTTAC	9255	False	NA	NA	False	NA	NA	NA	33071172	33071330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33071200_33071300
ES.25744.126	chr5	+	2451	14	ISM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	81181	2562	802	8	3prime_fragment	FALSE	canonical	3	129	junction_3	24.3013623695823	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	NA	False	NA	15	True	AATAAA	-16	NA	33102258	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.127	chr5	+	3511	11	NNC	ENSMUSG00000037426.19	novel	3359	21	NA	NA	2556	11	intron_retention	FALSE	canonical	1	2	junction_4	64.8003858013207	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	NA	False	NA	18	True	AATAAA	-19	NA	33104012	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125987_33126116_33131160_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.128	chr5	+	959	4	NNC	ENSMUSG00000037426.19	novel	3359	21	NA	NA	6163	-7243	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	91.2006335260647	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGCCTGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	33131225	33141755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33131270_33132696_33132889_33136728_33136899_33141202
ES.25744.129	chr5	+	2178	2	ISM	ENSMUSG00000037426.19	ENSMUST00000137169.8	3359	21	65075	-9	21660	9	3prime_fragment	FALSE	canonical	3	169	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	NA	False	NA	16	True	AATAAA	-17	NA	33146722	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33148169_33148282
ES.25744.13	chr5	+	5351	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	36.3321480940489	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2004	False	NA	16	True	AATAAA	-17	NA	33021055	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.14	chr5	+	5615	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	36.4349068030642	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2004	False	NA	16	True	AATAAA	-17	NA	33021055	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.15	chr5	+	5342	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	54.2458343489865	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2004	False	NA	18	True	AATAAA	-19	NA	33021055	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131178_33131270_33132699_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.16	chr5	+	5484	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	47.7789517600849	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2004	False	NA	18	True	AATAAA	-19	NA	33021055	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.17	chr5	+	5559	44	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.1071265836692	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2004	False	NA	16	True	AATAAA	-17	NA	33021055	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022136_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.18	chr5	+	5344	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	37.0983631546303	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2005	False	NA	16	True	AATAAA	-17	NA	33021056	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125949_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.2	chr5	+	5574	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-7	11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	43.1774078512459	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	1986	False	NA	18	True	AATAAA	-19	NA	33021037	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.20	chr5	+	5326	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	30.4982031048296	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2005	False	NA	19	True	AATAAA	-20	NA	33021056	33149017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.21	chr5	+	5548	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	40.6406532724647	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2005	False	NA	16	True	AATAAA	-17	NA	33021056	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.22	chr5	+	5177	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	39.1091341632617	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2005	False	NA	18	True	AATAAA	-19	NA	33021056	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.24	chr5	+	5102	41	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	52.3811750536393	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2006	False	NA	15	True	AATAAA	-16	NA	33021057	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075486_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33144274_33144341_33148085_33148169_33148282
ES.25744.25	chr5	+	5312	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	11	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	26.9931964217138	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2006	False	NA	18	True	AATAAA	-19	NA	33021057	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.26	chr5	+	5347	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_37	35.5154464814327	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2008	False	NA	16	True	AATAAA	-17	NA	33021059	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132699_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.27	chr5	+	5392	43	FSM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	-18	2555	3	15	multi-exon	FALSE	canonical	3	86	junction_1	24.5195673630974	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2008	False	NA	22	True	AATAAA	-23	NA	33021059	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.29	chr5	+	5305	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_38	52.0620783296249	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2009	False	NA	19	True	AATAAA	-20	NA	33021060	33149017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33144279_33144341_33148085_33148169_33148282
ES.25744.3	chr5	+	5436	33	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-1	4718	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	59.293949614927	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGGGAGAAGACTTCT	1997	False	NA	NA	False	NA	NA	NA	33021048	33107094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032711_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33105216
ES.25744.30	chr5	+	5398	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	11	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	40.7333010454463	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2009	False	NA	18	True	AATAAA	-19	NA	33021060	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.31	chr5	+	5438	42	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	4	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	57.0360625663759	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2009	False	NA	16	True	AATAAA	-17	NA	33021060	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034500_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.32	chr5	+	5735	45	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_42	48.827338526724	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2009	False	NA	15	True	AATAAA	-16	NA	33021060	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33147593_33147720_33148085_33148169_33148282
ES.25744.33	chr5	+	5383	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	44.7815876177828	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2009	False	NA	16	True	AATAAA	-17	NA	33021060	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.34	chr5	+	5493	44	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	4	13	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	41.165510355563	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2009	False	NA	20	True	AATAAA	-21	NA	33021060	33149018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.35	chr5	+	6189	38	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-3	-5837	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	51.1430626390261	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGGGTGTGTGTTTG	2010	False	NA	NA	False	AATAAA	-28	NA	33021061	33143161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202
ES.25744.37	chr5	+	5244	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-3	8	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	35.9017596701367	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2010	False	NA	15	True	AATAAA	-16	NA	33021061	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.38	chr5	+	5450	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-2	7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_33	51.6347785077207	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	2011	False	NA	14	True	AATAAA	-15	NA	33021062	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121800_33121846_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.39	chr5	+	5293	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.5518160531403	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCT	2011	False	NA	11	True	AATAAA	-12	NA	33021062	33149009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044379_33050711_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.4	chr5	+	5284	42	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	1	10	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	40.8530687980733	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCTCTCCCT	1999	False	NA	17	True	AATAAA	-18	NA	33021050	33149015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.40	chr5	+	5328	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-2	15	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	34.0963571440375	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2011	False	NA	22	True	AATAAA	-23	NA	33021062	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.41	chr5	+	5246	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	37.4541052489577	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2012	False	NA	16	True	AATAAA	-17	NA	33021063	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.43	chr5	+	5152	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	43.1529184992163	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2012	False	NA	16	True	AATAAA	-17	NA	33021063	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.44	chr5	+	5312	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_38	40.6367194852333	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCCCTCTCT	2013	False	NA	13	True	AATAAA	-14	NA	33021064	33149011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136743_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.45	chr5	+	5561	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	46.036248411447	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	2013	False	NA	14	True	AATAAA	-15	NA	33021064	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.46	chr5	+	5264	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	38.0218478788361	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2013	False	NA	16	True	AATAAA	-17	NA	33021064	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.47	chr5	+	5411	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	12	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	31.4394642018125	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2013	False	NA	19	True	AATAAA	-20	NA	33021064	33149017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.48	chr5	+	5858	40	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	-6453	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	47.7588039324395	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGATGTCAGAGAAAT	2013	False	NA	NA	False	CATAAA	-13	NA	33021064	33142545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202
ES.25744.49	chr5	+	4734	39	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	-7251	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	33.7260123023339	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGAGTGTTTTGCCT	2013	False	NA	NA	False	NA	NA	NA	33021064	33141747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202
ES.25744.5	chr5	+	7899	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	33.3637361350447	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGCCACCTACTTTC	2000	False	NA	NA	False	AATAAA	-16	NA	33021051	33151570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.50	chr5	+	5390	42	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	66.6272806519013	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	2014	False	NA	14	True	AATAAA	-15	NA	33021065	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33105216_33105359_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132699_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.51	chr5	+	5373	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	15	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	51.054309485163	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2016	False	NA	22	True	AATAAA	-23	NA	33021067	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136743_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.52	chr5	+	5303	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	39.9341516297649	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	2017	False	NA	14	True	AATAAA	-15	NA	33021068	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095644_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.53	chr5	+	3368	24	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	4	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.4181300420483	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2017	False	NA	18	True	AATAAA	-19	NA	33021068	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022001_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33095549_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.54	chr5	+	5389	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	5	6	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	43.2637589035803	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCCCTCTCT	2018	False	NA	13	True	AATAAA	-14	NA	33021069	33149011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.56	chr5	+	5360	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	5	9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	40.1498609943855	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2018	False	NA	16	True	AATAAA	-17	NA	33021069	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022001_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.57	chr5	+	5320	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	5	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.062368217495	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2018	False	NA	18	True	AATAAA	-19	NA	33021069	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032713_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.58	chr5	+	5417	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	5	7	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	47.1846435778544	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCCCTCTCTC	2018	False	NA	14	True	AATAAA	-15	NA	33021069	33149012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.59	chr5	+	5533	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	5	11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	42.0275258035739	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2018	False	NA	18	True	AATAAA	-19	NA	33021069	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.6	chr5	+	5477	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	2	15	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	36.5368450911651	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2000	False	NA	22	True	AATAAA	-23	NA	33021051	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.60	chr5	+	5174	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	5	12	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	40.380038385321	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCTCTCCCTCC	2018	False	NA	19	True	AATAAA	-20	NA	33021069	33149017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.62	chr5	+	5394	43	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	51.097390448609	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2018	False	NA	15	True	AATAAA	-16	NA	33021069	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136743_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.63	chr5	+	5101	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	5	-50	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	41.872238714929	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCACACCAGCTGT	2018	False	NA	-50	True	NA	NA	NA	33021069	33148948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.65	chr5	+	2636	24	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	6	27986	6	4134	5prime_fragment	FALSE	canonical	3	86	junction_1	24.279562690898	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATACACCTTTTCAATTC	2019	False	NA	NA	False	NA	NA	NA	33021070	33085658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188
ES.25744.66	chr5	+	7908	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	6	6	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	36.3321480940489	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGCGCTTACTGTGT	2019	False	NA	NA	False	AATAAA	-32	NA	33021070	33151586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.67	chr5	+	5209	40	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-6	14	combination_of_known_junctions	FALSE	canonical	3	20	junction_38	48.516181376509	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCTCTCCCTCCCC	2020	False	NA	21	True	AATAAA	-22	NA	33021071	33149019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.68	chr5	+	5705	44	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	-3	13	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	41.0762327340185	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2023	False	NA	20	True	AATAAA	-21	NA	33021074	33149018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.69	chr5	+	6190	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-1	9	intron_retention	FALSE	canonical	0	0	junction_2	43.5352667696745	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2025	False	NA	16	True	AATAAA	-17	NA	33021076	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022041_33025317_33025400_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.7	chr5	+	5626	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	42.0275258035739	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2000	False	NA	15	True	AATAAA	-16	NA	33021051	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.70	chr5	+	5412	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	43.4740680368329	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2026	False	NA	15	True	AATAAA	-16	NA	33021077	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121800_33121846_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.71	chr5	+	5634	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	44.8671508398939	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCCCTCTCTCCCTC	2026	False	NA	18	True	AATAAA	-19	NA	33021077	33149016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.72	chr5	+	6920	40	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	-2251	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	37.2281379306085	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTATTTGCTGCTCCTTG	2027	False	NA	NA	False	AATAAA	-33	NA	33021078	33146747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279
ES.25744.73	chr5	+	5057	41	ISM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	1	6730	1	-4153	5prime_fragment	FALSE	canonical	3	86	junction_1	25.0471555271252	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATGGATGGTTTTGA	2027	False	NA	NA	False	AGTAAA	-18	NA	33021078	33144845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279
ES.25744.74	chr5	+	5239	41	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	38.7718889790013	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2027	False	NA	15	True	AATAAA	-16	NA	33021078	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.75	chr5	+	7863	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_32	30.4982031048296	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTACTTTCTGAGCG	2027	False	NA	NA	False	AATAAA	-22	NA	33021078	33151576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.76	chr5	+	5459	43	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	43.3504741086205	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2028	False	NA	15	True	AATAAA	-16	NA	33021079	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.78	chr5	+	5567	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_37	47.6969184722245	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2028	False	NA	16	True	AATAAA	-17	NA	33021079	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132696_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.79	chr5	+	5530	44	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.1894735513111	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2029	False	NA	22	True	AATAAA	-23	NA	33021080	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021501_33021657_33021920_33022048_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.8	chr5	+	5340	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	33.3637361350447	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCCCTCTCT	2000	False	NA	13	True	AATAAA	-14	NA	33021051	33149011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.81	chr5	+	5668	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	36.4349068030642	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2029	False	NA	16	True	AATAAA	-17	NA	33021080	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.82	chr5	+	5163	41	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	45.5286722846164	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTCCCTCCCTCTCT	2029	False	NA	13	True	AATAAA	-14	NA	33021080	33149011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075331_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.83	chr5	+	5214	40	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	3	-4148	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	46.2993149136433	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGATGGTTTTGAAACAA	2029	False	NA	NA	False	AGTAAA	-23	NA	33021080	33144850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279
ES.25744.84	chr5	+	5261	41	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	20	junction_39	44.7721383786837	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2029	False	NA	16	True	AATAAA	-17	NA	33021080	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.85	chr5	+	5168	40	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	20	junction_38	44.4607103699538	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2029	False	NA	16	True	AATAAA	-17	NA	33021080	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
ES.25744.86	chr5	+	5519	42	NNC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.1139095085824	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2029	False	NA	15	True	AATAAA	-16	NA	33021080	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021392_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.87	chr5	+	5364	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	3	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.7757960366598	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCTCTCCCTCCC	2029	False	NA	20	True	AATAAA	-21	NA	33021080	33149018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021134_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.90	chr5	+	5282	42	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	10	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.2657192022245	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2036	False	NA	15	True	AATAAA	-16	NA	33021087	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021134_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.91	chr5	+	5595	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	10	9	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	40.6406532724647	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2036	False	NA	16	True	AATAAA	-17	NA	33021087	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.93	chr5	+	5243	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-13	15	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	35.7686066030315	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCCTCTCTCCCTCCCCC	2039	False	NA	22	True	AATAAA	-23	NA	33021090	33149020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.94	chr5	+	5344	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-13	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	49.2313019169245	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCTCCCTCTCTCCC	2039	False	NA	16	True	AATAAA	-17	NA	33021090	33149014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081502_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095053_33095491_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136743_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25744.98	chr5	+	5309	43	NNC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	-11	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	35.2754387068924	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCTCTCC	2041	False	NA	15	True	AATAAA	-16	NA	33021092	33149013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33021166_33021920_33022001_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ES.25745.1	chr5	-	6925	1	Antisense	novelGene_ENSMUSG00000037426.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGGAAGGACTTGGAT	NA	False	NA	NA	False	AGTAAA	-32	NA	33029398	33022473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_33022500_33029400
ES.25745.2	chr5	-	2644	1	Intergenic	novelGene_21433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTGGTACTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33029398	33026754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33026800_33029400
ES.25746.1	chr5	-	157	1	Intergenic	novelGene_21434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATATATATTAA	NA	False	NA	NA	False	NA	NA	NA	33048190	33048033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33048000_33048200
ES.25747.1	chr5	-	178	1	Intergenic	novelGene_21435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	33052059	33051881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33051900_33052100
ES.25748.1	chr5	-	215	1	Intergenic	novelGene_21436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAATCTGAACTGTAC	NA	False	NA	NA	False	NA	NA	NA	33052419	33052204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33052200_33052400
ES.25749.1	chr5	-	2343	1	Antisense	novelGene_ENSMUSG00000037426.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTCATTAAGTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	33060580	33058237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_33058200_33060600
ES.2575.1	chr10	+	2702	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	-4	388	-4	-388	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTTTTTTTTTTTTTA	NA	False	NA	18	True	AATAAA	-19	NA	34158181	34160883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_34158200_34160900
ES.2575.2	chr10	+	2449	2	Genic_Genomic	ENSMUSG00000047514.7	novel	3086	1	NA	NA	24	-391	multi-exon	FALSE	canonical	1	3	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGGCTTTTTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	34158209	34160880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_34159008_34159229
ES.2575.3	chr10	+	2512	2	Genic_Genomic	ENSMUSG00000047514.7	novel	3086	1	NA	NA	26	-390	multi-exon	FALSE	canonical	0	0	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCTTTTTTTTTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	34158211	34160881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_34158401_34158558
ES.2575.4	chr10	+	2358	2	Genic_Genomic	ENSMUSG00000047514.7	novel	3086	1	NA	NA	51	-391	multi-exon	FALSE	non_canonical	0	0	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGGCTTTTTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	34158236	34160880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_34158292_34158577
ES.25750.1	chr5	-	304	1	Intergenic	novelGene_21437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCCAACTTCAACATCA	NA	False	NA	NA	False	AGTAAA	-8	NA	33067098	33066794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33066800_33067100
ES.25751.1	chr5	-	177	1	Intergenic	novelGene_21439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	33115882	33115705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33115700_33115900
ES.25752.1	chr5	+	1811	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	-46	-1	-46	1	multi-exon	FALSE	canonical	3	1727	junction_1	0	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGGCCTTGATTTT	NA	False	NA	10	True	AATAAA	-21	NA	33176113	33185311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33176499_33183885
ES.25752.10	chr5	+	1619	2	NNC	ENSMUSG00000018965.12	novel	904	2	NA	NA	-193	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCCTGGCCTTGATT	NA	False	NA	8	True	AATAAA	-19	NA	33176911	33185309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33177107_33183885
ES.25752.2	chr5	+	1577	3	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	863.5	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCCTGGCCTTGATT	NA	False	NA	8	True	AATAAA	-19	NA	33176117	33185309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176136_33176363_33176499_33183885
ES.25752.3	chr5	+	9135	1	FSM	ENSMUSG00000018965.12	ENSMUST00000199651.2	2181	1	-47	-6907	15	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	581	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCCTGGCCTTGATT	NA	False	NA	8	True	AATAAA	-19	NA	33176174	33185309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33176200_33185300
ES.25752.4	chr5	+	1586	3	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	863.5	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCCTGGCCTTGATT	NA	False	NA	8	True	AATAAA	-19	NA	33176221	33185309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176336_33176450_33176499_33183885
ES.25752.5	chr5	+	1873	3	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGCCTGGCCTTGATT	NA	False	NA	8	True	AATAAA	-19	NA	33176221	33185309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176499_33178759_33178932_33183885
ES.25752.6	chr5	+	3934	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	154	-2324	92	2324	multi-exon	FALSE	canonical	3	1727	junction_1	0	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTGACTGAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	33176313	33187634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33176499_33183885
ES.25752.7	chr5	+	1568	2	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	120	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTATCTGTGCCTGGCC	NA	False	NA	2	True	AATAAA	-40	NA	33176341	33185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176499_33183892
ES.25752.8	chr5	+	875	2	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	141	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGCCTGGCCTTGAT	NA	False	NA	7	True	AATAAA	-45	NA	33176362	33185308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176400_33184470
ES.25752.9	chr5	+	1562	2	NNC	ENSMUSG00000018965.12	novel	1764	2	NA	NA	-375	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATCTGTGCCTGGCCTTG	NA	False	NA	5	True	AATAAA	-43	NA	33176729	33185306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33176871_33183885
ES.25753.1	chr5	-	2201	2	Antisense	novelGene_ENSMUSG00000018965.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTCATCTACAAACTAT	NA	False	NA	NA	False	NA	NA	NA	33182144	33178500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_33178575_33180017
ES.25753.2	chr5	-	5229	1	Antisense	novelGene_ENSMUSG00000018965.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTCATCTACAAACTAT	NA	False	NA	NA	False	NA	NA	NA	33183729	33178500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_33178500_33183700
ES.25754.1	chr5	-	180	1	Intergenic	novelGene_21440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATGCACTATCTCC	NA	False	NA	2	True	NA	NA	NA	33191147	33190967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33191000_33191100
ES.25755.1	chr5	+	3787	16	NNC	ENSMUSG00000011034.7	novel	4104	15	NA	NA	-59084	-175	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.27956636699969	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGTGTGCTTTCCCTG	NA	False	NA	NA	False	AATAAA	-11	NA	33202478	33320039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33202649_33225966_33226028_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25755.2	chr5	+	427	1	FSM	ENSMUSG00000093885.3	ENSMUST00000137013.2	333	1	-53	-41	-53	41	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACCC	NA	False	NA	NA	False	AATAAA	-22	NA	33233328	33233755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33233300_33233800
ES.25755.3	chr5	+	2630	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	-45	1519	-45	-1519	multi-exon	FALSE	canonical	0	0	junction_1	3.0572763655761	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTTCCTGTCATTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	33261517	33318695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25755.4	chr5	+	3959	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	-28	173	-28	-173	multi-exon	FALSE	canonical	0	0	junction_1	3.0572763655761	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGCTTTCCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	33261534	33320041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25755.5	chr5	+	3963	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	143	-2	143	2	multi-exon	FALSE	canonical	0	0	junction_1	3.0572763655761	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTTGAAATTGCAGGTA	NA	False	NA	NA	False	AATAAA	-17	NA	33261705	33320216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25755.6	chr5	+	3589	15	NNC	ENSMUSG00000011034.7	novel	4104	15	NA	NA	12325	-175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.0572763655761	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGTGTGCTTTCCCTG	NA	False	NA	NA	False	AATAAA	-11	NA	33273887	33320039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33273921_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25755.7	chr5	+	3636	14	NNC	ENSMUSG00000011034.7	novel	4104	15	NA	NA	17420	-171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.03432044974093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTTTCCCTGTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	33278982	33320043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33279131_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ES.25756.1	chr5	-	186	1	Intergenic	novelGene_21441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATCCATCACCT	NA	False	NA	NA	False	NA	NA	NA	33254706	33254520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33254500_33254700
ES.25757.1	chr5	-	216	1	Intergenic	novelGene_21442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGGTCTGCATAAGC	5884	False	NA	NA	False	NA	NA	NA	33269234	33269018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33269000_33269200
ES.25758.1	chr5	+	160	1	Intergenic	novelGene_21443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAAATTTAA	272	False	NA	NA	False	NA	NA	NA	33335827	33335987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33335800_33336000
ES.25759.1	chr5	+	193	1	Intergenic	novelGene_21444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	33356381	33356574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33356400_33356600
ES.2576.1	chr10	-	181	1	Intergenic	novelGene_1952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGAAGATTTC	9151	False	NA	NA	False	NA	NA	NA	34169427	34169246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34169200_34169400
ES.25760.1	chr5	-	2650	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-149	29	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGAGCACTGGTGGGT	NA	False	NA	15	True	NA	NA	NA	33432487	33405037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.10	chr5	-	2124	8	FSM	ENSMUSG00000037373.13	ENSMUST00000201575.4	2091	8	-3	-30	-1	-1	multi-exon	FALSE	canonical	1	4	junction_7	292.512270804882	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432339	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33432122
ES.25760.11	chr5	-	2530	10	NNC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	264.531918305654	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432334	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407651_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.12	chr5	-	3478	8	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	693	junction_6	76.6209860952212	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432327	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.15	chr5	-	2393	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-96	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	265.745817476349	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCCTGGCACCAGTTTTA	NA	False	NA	-16	True	AATAAA	-19	NA	33432030	33405068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33431891
ES.25760.19	chr5	-	2812	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	226	junction_1	204.512224573496	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCACGCCTGGCACCAGTT	NA	False	NA	-19	True	AATAAA	-16	NA	33432324	33405071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406028_33406450_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.2	chr5	-	2114	9	NIC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	3	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	282.801608906314	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAATGGCTTCATCAA	NA	False	NA	-3	True	AATAAA	-32	NA	33431931	33405055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33431891
ES.25760.21	chr5	-	3896	7	NNC	ENSMUSG00000037373.13	novel	3595	7	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	301.441905219268	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGCACGCCTGGCACCAG	NA	False	NA	-21	True	AATAAA	-14	NA	33432335	33405073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33407846_33408201_33408417_33416481_33416689_33418352_33418494_33424226_33424382_33426785_33426979_33432122
ES.25760.22	chr5	-	2423	10	NNC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	303.182665063591	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGCACGCCTGGCACC	NA	False	NA	-23	True	AATAAA	-12	NA	33432336	33405075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408382_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.23	chr5	-	2629	8	NIC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	1	-9	intron_retention	FALSE	canonical	3	123	junction_7	252.996007066983	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGCACGCCTGGCACC	NA	False	NA	-23	True	AATAAA	-12	NA	33432335	33405075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ES.25760.24	chr5	-	2236	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	2	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	275.583812115298	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCGGCACGCCTGGC	NA	False	NA	-26	True	AATAAA	-9	NA	33432321	33405078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.25	chr5	-	2201	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	99	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	272.243457221657	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCGGCACGCCTGGC	NA	False	NA	-26	True	AATAAA	-9	NA	33432224	33405078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33424226_33424382_33426785_33426979_33432122
ES.25760.27	chr5	-	2866	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-1	-12	intron_retention	FALSE	canonical	3	693	junction_7	73.586258907489	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCGGCACGCCTGGC	NA	False	NA	-26	True	AATAAA	-9	NA	33432324	33405078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.28	chr5	-	2523	11	NNC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	328.309853644389	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCGGCACGCCTGGC	NA	False	NA	-26	True	AATAAA	-9	NA	33432336	33405078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33413453_33413519_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.3	chr5	-	2230	9	NNC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	-6	11	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	342.960616361413	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAATGGCTTCATCAA	NA	False	NA	-3	True	AATAAA	-32	NA	33432344	33405055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406031_33406450_33406569_33406930_33406993_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ES.25760.30	chr5	-	2182	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-1	26	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACAAAGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	33432324	33405342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.31	chr5	-	2022	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATTCAGCAAGTCAGTT	NA	False	NA	80	True	AAAAAG	-12	NA	33432335	33405513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.32	chr5	-	1873	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-124	11	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	298.867759218019	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTTGTCTGTGTACA	NA	False	NA	0	True	NA	NA	NA	33432462	33405593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ES.25760.35	chr5	-	1930	10	NNC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	265.338265355241	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAATGTTCTTGTCTGTGT	NA	False	NA	-3	True	NA	NA	NA	33432334	33405596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418360_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.36	chr5	-	1820	10	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-55	4	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	265.745817476349	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACGAATGTTCTTGTCT	NA	False	NA	-7	True	NA	NA	NA	33431989	33405600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33431891
ES.25760.37	chr5	-	3808	2	ISM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	13	15710	0	-2373	5prime_fragment	FALSE	canonical	3	123	junction_1	0	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACACTATAAAAAATATTCA	NA	False	NA	NA	False	NA	NA	NA	33432325	33420776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33424382_33432122
ES.25760.4	chr5	-	3125	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	693	junction_7	78.351372036487	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432335	33405066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406031_33406450_33406569_33406930_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.5	chr5	-	2288	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	-10	1	-10	-1	multi-exon	FALSE	canonical	3	123	junction_8	242.929741643546	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432348	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ES.25760.7	chr5	-	2330	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	276.142965689876	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432318	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33406028_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25760.8	chr5	-	2601	10	NNC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	-148	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	303.862095101554	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGCACCAGTTTTAA	NA	False	NA	-15	True	AATAAA	-20	NA	33432486	33405067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33406028_33406450_33406569_33406930_33407059_33407729_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ES.25761.1	chr5	+	178	1	Intergenic	novelGene_21445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	33439562	33439740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33439600_33439700
ES.25761.2	chr5	+	377	1	Intergenic	novelGene_21446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGGAAGCTGCGGGCCAA	NA	False	NA	NA	False	NA	NA	NA	33439563	33439940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33439600_33439900
ES.25762.1	chr5	-	1914	7	NNC	ENSMUSG00000092275.2	novel	1932	7	NA	NA	45	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.06718737290547	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTGTTAGCATTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	33468449	33450954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33451198_33452077_33452148_33452269_33452443_33453001_33453146_33454329_33455323_33455485_33455604_33468276
ES.25762.2	chr5	-	1715	6	NIC	ENSMUSG00000092275.2	novel	1932	7	NA	NA	68	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.09544511501033	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTGGTGTTAGCATT	NA	False	NA	NA	False	AATAAA	-16	NA	33468426	33450957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33451198_33452077_33452148_33453001_33453146_33454329_33455323_33455485_33455604_33468276
ES.25762.3	chr5	-	2357	3	NNC	ENSMUSG00000092275.2	novel	1932	7	NA	NA	14177	-1	intron_retention	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAACTTGGTGTTAGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	33454317	33450958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33451198_33452077_33452148_33452269
ES.25763.1	chr5	+	2605	8	NNC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	11	-3	intron_retention	FALSE	canonical	1	4	junction_3	199.602053075204	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492863	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520069_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957
ES.25763.10	chr5	+	3830	8	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	507	junction_4	42.2876447435795	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492897	33530638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33527909_33528957_33529154_33529610
ES.25763.11	chr5	+	5505	7	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	534	junction_4	35.4655544938403	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492898	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33523143_33525981_33526091_33527774_33527909_33528957
ES.25763.12	chr5	+	7060	6	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	507	junction_2	15.7911367545215	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGTGAGGTGTTT	NA	False	NA	16	True	AATAAA	-17	NA	33492898	33530636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33520162_33523065_33523143_33525981_33526091_33527774_33529154_33529610
ES.25763.13	chr5	+	4741	7	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	507	junction_3	42.9068759058499	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492898	33530638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957
ES.25763.14	chr5	+	7187	7	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	534	junction_3	37.636049503398	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492898	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.16	chr5	+	3644	7	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	50	5	-2	-5	intron_retention	FALSE	canonical	3	507	junction_4	41.0179500002404	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33492902	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774
ES.25763.17	chr5	+	4276	8	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	1	-3	intron_retention	FALSE	canonical	3	507	junction_3	40.8321601941711	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492905	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.19	chr5	+	2025	9	NNC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	245.003794613471	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33492908	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528106_33528196_33529610
ES.25763.20	chr5	+	2172	9	NNC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	188.498632289468	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33492909	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33492990_33515783_33515967_33517695_33517900_33519997_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.21	chr5	+	3862	8	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	1	-3	intron_retention	FALSE	canonical	3	507	junction_3	31.7477301133001	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492909	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.22	chr5	+	2586	8	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	61	3	5	-3	intron_retention	FALSE	canonical	3	507	junction_4	40.9997511192048	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492913	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957
ES.25763.23	chr5	+	3157	8	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	24	-5	intron_retention	FALSE	canonical	3	507	junction_4	38.9568049647456	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33492932	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33529154_33529610
ES.25763.24	chr5	+	2244	9	NNC	ENSMUSG00000079562.8	novel	775	5	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	238.763186808603	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33493558	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33493756_33515783_33515967_33517699_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.26	chr5	+	1453	1	Intergenic	novelGene_21448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCACTGACTCCTGCT	NA	False	NA	NA	False	NA	NA	NA	33504152	33505605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33504200_33505600
ES.25763.27	chr5	+	226	1	Intergenic	novelGene_21449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATATTTCCTGGTGAC	NA	False	NA	NA	False	NA	NA	NA	33512882	33513108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33512900_33513100
ES.25763.28	chr5	+	4448	5	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-2657	-4	intron_retention	FALSE	canonical	3	507	junction_2	40.4134878474996	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGTGAGGTGTTT	NA	False	NA	16	True	AATAAA	-17	NA	33517257	33530636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33517900_33520038_33520162_33523065_33523143_33525981_33527909_33528957
ES.25763.29	chr5	+	703	5	NNC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-2096	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.695577367354	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGTGTGTGAGGTGT	NA	False	NA	14	True	AATAAA	-15	NA	33517818	33530634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33530321
ES.25763.3	chr5	+	2175	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	18	0	18	0	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGGTGTTTGTAA	NA	False	NA	20	True	AATAAA	-21	NA	33492870	33530640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.30	chr5	+	4009	3	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-3820	-5	intron_retention	FALSE	canonical	3	536	junction_2	34.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTGTGAGGTGTT	NA	False	NA	15	True	AATAAA	-16	NA	33525120	33530635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33527909_33528957_33529154_33529610
ES.25763.4	chr5	+	5067	8	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	534	junction_4	35.8557199490015	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492879	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.5	chr5	+	5397	6	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	507	junction_3	27.7315704567917	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492880	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774
ES.25763.6	chr5	+	8299	5	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	534	junction_3	21.821720830402	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGAGGTGTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	33492883	33530638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33517900_33520038_33523143_33525981_33526091_33527774
ES.25763.7	chr5	+	6020	7	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	507	junction_2	29.7400777104268	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492890	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ES.25763.8	chr5	+	5827	5	NIC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_2	244.794301404261	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	False	NA	17	True	AATAAA	-18	NA	33492897	33530637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33492990_33515783_33520162_33527774_33527909_33528957_33529154_33529610
ES.25763.9	chr5	+	2077	9	NNC	ENSMUSG00000079562.8	novel	2193	9	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	189.82586592717	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGTGTGTGAGGTGT	NA	False	NA	14	True	AATAAA	-15	NA	33492897	33530634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529089_33529610
ES.25764.1	chr5	-	6461	1	Intergenic	novelGene_21447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	33500835	33494374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33494400_33500800
ES.25765.1	chr5	+	2342	14	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	10	4388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.72181630968525	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATGCTGTGGTCCCCT	NA	False	NA	NA	False	AGTAAA	-16	NA	33535902	33572251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536073_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
ES.25765.2	chr5	+	3206	9	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	10	29	intron_retention	FALSE	canonical	0	0	junction_1	2.87228132326901	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGGAGGTGGGCAC	NA	False	NA	NA	False	NA	NA	NA	33535902	33567892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536073_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152
ES.25765.3	chr5	+	2499	9	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	11	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.53722289127305	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGGAGGTGGGCAC	NA	False	NA	NA	False	NA	NA	NA	33535903	33567892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536073_33536569_33536670_33545153_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33566152_33566325_33566770
ES.25765.4	chr5	+	2838	13	NIC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	13	4390	intron_retention	FALSE	canonical	1	2	junction_12	2.35702260395516	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCTGTGGTCCCCTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	33535905	33572253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
ES.25765.5	chr5	+	2482	14	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	16	4476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.72181630968525	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCAGAGCTTGTTTTTT	NA	False	NA	NA	False	AATAGA	-14	NA	33535908	33572339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536131_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
ES.25765.6	chr5	+	3144	9	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	-47	-1	intron_retention	FALSE	canonical	0	0	junction_1	2.87228132326901	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	33535992	33567862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536131_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152
ES.25765.7	chr5	+	3261	9	ISM	ENSMUSG00000037355.15	ENSMUST00000087864.12	7326	14	53	9235	-23	0	intron_retention	FALSE	canonical	1	3	junction_1	2.26039266500314	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	33536092	33567863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33536347_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152
ES.25765.8	chr5	+	4316	12	NNC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	-9	4541	intron_retention	FALSE	canonical	0	0	junction_3	2.95699199405284	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGGATATGGTTTAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	33536106	33572404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33536347_33536569_33536670_33544999_33545331_33546063_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33568387_33568904_33569017_33571242_33571418_33572141
ES.25765.9	chr5	+	3178	1	NIC	ENSMUSG00000037355.15	novel	7326	14	NA	NA	28599	29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTTGGAGGTGGGCAC	NA	False	NA	NA	False	NA	NA	NA	33564714	33567892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33564700_33567900
ES.25766.1	chr5	-	170	1	Intergenic	novelGene_21450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATATTGGGTTCT	NA	False	NA	NA	False	NA	NA	NA	33537640	33537470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33537500_33537600
ES.25767.1	chr5	+	1732	1	ISM	ENSMUSG00000037355.15	ENSMUST00000087864.12	7326	14	39326	1	39250	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGCTGTTGTTATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33575365	33577097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33575400_33577100
ES.25768.1	chr5	+	170	1	Intergenic	novelGene_21451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAAACCAATGATC	NA	False	NA	NA	False	NA	NA	NA	33604723	33604893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33604700_33604900
ES.25769.1	chr5	+	2253	1	Intergenic	novelGene_21456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGAGATGGCTCGA	NA	False	NA	NA	False	NA	NA	NA	33648521	33650774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33648500_33650800
ES.2577.1	chr10	+	3883	1	FSM	ENSMUSG00000039485.9	ENSMUST00000047935.8	3879	1	-6	2	-6	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCTGTCTGGGTGAAT	NA	False	NA	NA	False	AATAAA	-5	NA	34173431	34177314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_34173400_34177300
ES.2577.2	chr10	+	2306	2	FSM	ENSMUSG00000039485.9	ENSMUST00000213791.2	560	2	-1810	64	4	-64	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	34173441	34177248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_34175405_34176905
ES.25770.1	chr5	+	3677	1	Intergenic	novelGene_21460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGTATTGGGTGCACA	8053	False	NA	NA	False	NA	NA	NA	33669264	33672941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33669300_33672900
ES.25771.1	chr5	-	3149	4	Intergenic	novelGene_21452	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGATGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	33692821	33634394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33637277_33637599_33637662_33644643_33644786_33692758
ES.25771.10	chr5	-	3449	2	Intergenic	novelGene_21467	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692972	33689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689944_33690015
ES.25771.11	chr5	-	2330	3	Intergenic	novelGene_21463	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692802	33689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689998_33690067_33691265_33692215
ES.25771.12	chr5	-	3345	2	Intergenic	novelGene_21465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692866	33689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689998_33690067
ES.25771.13	chr5	-	3513	1	Intergenic	novelGene_21466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692964	33689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689500_33693000
ES.25771.14	chr5	-	2382	3	Intergenic	novelGene_21464	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	33692814	33689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689998_33690067_33691533_33692443
ES.25771.16	chr5	-	1837	3	Intergenic	novelGene_21468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGGGATGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	33692807	33689453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689998_33690067_33691312_33692758
ES.25771.17	chr5	-	3238	2	Intergenic	novelGene_21469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33692793	33689485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33690017_33690086
ES.25771.2	chr5	-	4687	5	Intergenic	novelGene_21453	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.79422863405995	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGTGATGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	33692869	33634396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33637277_33637464_33637571_33642296_33642377_33643280_33644791_33692758
ES.25771.3	chr5	-	2204	3	Intergenic	novelGene_21454	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGCGTCCATATTGT	7508	False	NA	NA	False	NA	NA	NA	33645049	33641264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33641417_33642093_33642377_33643280
ES.25771.4	chr5	-	3725	1	Intergenic	novelGene_21455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTACTAGACTGGTGGC	9767	False	NA	NA	False	AATACA	-17	NA	33645406	33641681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33641700_33645400
ES.25771.5	chr5	-	414	2	Intergenic	novelGene_21457	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTCACTGTATAGTCC	NA	False	NA	NA	False	CATAAA	-14	NA	33692821	33649411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33649763_33692758
ES.25771.6	chr5	-	672	1	Intergenic	novelGene_21458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTCATGTTTTCTCTTT	5889	False	NA	NA	False	ATTAAA	-15	NA	33652025	33651353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33651400_33652000
ES.25771.7	chr5	-	3690	1	Intergenic	novelGene_21459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTCTCAAGGACAGAG	NA	False	NA	NA	False	AAAAAG	-37	NA	33671379	33667689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33667700_33671400
ES.25771.8	chr5	-	3492	2	Intergenic	novelGene_21461	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTGTCTTCATCCTGC	NA	False	NA	NA	False	NA	NA	NA	33692814	33689254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689948_33690015
ES.25771.9	chr5	-	3506	2	Intergenic	novelGene_21462	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33692863	33689288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33689960_33690028
ES.25772.1	chr5	+	175	1	Intergenic	novelGene_21470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGACCAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	33740015	33740190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33740000_33740200
ES.25773.1	chr5	+	175	1	Intergenic	novelGene_21471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	33749633	33749808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_33749600_33749800
ES.25774.1	chr5	-	2082	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	-78	5	-78	4	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTAGATTCTTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	33787057	33757695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.10	chr5	-	2077	7	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	86.2259628340946	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786962	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33781049_33781142_33786196_33786322_33786680
ES.25774.11	chr5	-	1932	6	NIC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	85.7148761884423	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786978	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33786192_33786322_33786680
ES.25774.12	chr5	-	1524	4	NIC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	14236	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.7400787401181	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33772020	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33758225_33764807_33765572_33765674_33765834_33771946
ES.25774.13	chr5	-	2184	7	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	80.7907104120819	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786621
ES.25774.14	chr5	-	3817	2	ISM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	18835	-2	18159	2	intron_retention	FALSE	canonical	3	180	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33768097	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33758225_33764807
ES.25774.15	chr5	-	1923	6	NNC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.2632712549754	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786947	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786243_33786322_33786680
ES.25774.16	chr5	-	2217	8	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.517495099983	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786943	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33781049_33781142_33786196_33786322_33786680
ES.25774.17	chr5	-	1622	6	NNC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_5	76.6159252375118	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786984	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765034_33765293_33765572_33767775_33767831_33771946_33772179_33786680
ES.25774.2	chr5	-	2167	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	-52	-3	-5	3	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786984	33757696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.20	chr5	-	1956	5	NIC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	81.3956387038028	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786990	33757699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33758225_33764807_33765572_33771946_33772179_33786196_33786322_33786680
ES.25774.21	chr5	-	1902	8	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	84.4306260325298	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786978	33757699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765034_33765293_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786192_33786322_33786680
ES.25774.22	chr5	-	4071	6	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	75.948930209714	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATTCTGCCTAGATTC	NA	False	NA	-13	True	ATTAAA	-13	NA	33786943	33757700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33765667_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.23	chr5	-	1567	2	ISM	ENSMUSG00000037339.18	ENSMUST00000137705.8	706	5	-45	5345	-6	1255	5prime_fragment	FALSE	canonical	3	14	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGAGTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	33786972	33770903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33772179_33786680
ES.25774.24	chr5	-	6134	1	Intergenic	novelGene_21472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTATGTGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	33783940	33777806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33777800_33783900
ES.25774.25	chr5	-	946	1	Genic_Genomic	ENSMUSG00000037339.18	novel	NA	NA	NA	NA	-8	-13883	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAGGTATTTAATCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	33786987	33786041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_33786000_33787000
ES.25774.3	chr5	-	8570	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	3	3	intron_retention	FALSE	canonical	3	127	junction_1	29.6679540919154	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGCCTAGATTCTTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	33786963	33757696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.4	chr5	-	1725	7	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_2	63.6310982670162	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786962	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765034_33765293_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.7	chr5	-	1882	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	70.1248885917119	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786984	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786680
ES.25774.8	chr5	-	1244	5	NIC	ENSMUSG00000037339.18	novel	2009	6	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	76.423164027669	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786985	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33758225_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ES.25774.9	chr5	-	4201	7	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_5	91.8398364303615	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	False	NA	-10	True	ATTAAA	-16	NA	33786985	33757697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33758225_33764807_33765572_33765674_33767831_33771946_33772179_33781049_33781142_33786196_33786322_33786680
ES.25775.1	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000004642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6692	False	NA	NA	False	NA	NA	NA	33806274	33806450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_33806300_33806400
ES.25776.1	chr5	+	2599	15	NNC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-29	-3	intron_retention	TRUE	canonical	2	5	junction_5	335.329300532951	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815442	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33821807_33822095_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.10	chr5	+	2726	13	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	4	-3	intron_retention	FALSE	canonical	3	792	junction_6	79.6252943479646	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815901	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.12	chr5	+	2201	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	258.184527034445	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815902	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818984_33821168_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.13	chr5	+	2219	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	257.823583095108	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815903	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33828999_33829130_33829325
ES.25776.14	chr5	+	2599	13	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-12	4	intron_retention	FALSE	canonical	3	75	junction_1	255.698539408334	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCCTGTTGTTTATAAC	NA	False	NA	39	True	ACTAAA	-27	NA	33815917	33829549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.15	chr5	+	5244	10	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	792	junction_5	89.3532316147547	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAACCCAGGTCCTGTTG	NA	False	NA	31	True	ACTAAA	-19	NA	33815917	33829541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33824512_33825306_33825398_33825477_33825580_33826005_33826992_33828747_33828855_33829008
ES.25776.18	chr5	+	2408	14	ISM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	451	6	-7	-3	intron_retention	FALSE	canonical	3	29	junction_6	257.510613327551	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815922	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.19	chr5	+	2209	14	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	32	junction_12	255.634817196941	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815923	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069_33829130_33829325
ES.25776.2	chr5	+	2679	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-487	-5	-29	2	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCCTGTTGTTTATA	NA	False	NA	37	True	ACTAAA	-25	NA	33815442	33829547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.20	chr5	+	4458	12	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	792	junction_6	73.8820816130073	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815925	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33828855_33829008
ES.25776.21	chr5	+	2259	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	255.855268398653	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815926	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829202_33829325
ES.25776.22	chr5	+	3396	11	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	792	junction_6	85.064740051328	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815926	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826992_33828747_33828855_33829008
ES.25776.23	chr5	+	2094	12	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-3	2202	-3	-2202	5prime_fragment	FALSE	canonical	3	792	junction_7	82.8156371228654	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAGCACA	NA	False	NA	NA	False	NA	NA	NA	33815926	33827340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821
ES.25776.24	chr5	+	2533	14	NNC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_4	345.634944403629	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815926	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.25	chr5	+	3081	12	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	792	junction_7	90.3267713351624	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815926	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826992_33828747_33828855_33829008
ES.25776.26	chr5	+	3458	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-1	1138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.734636286941	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTGTGTGTCTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	33815928	33830683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.27	chr5	+	4136	13	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	intron_retention	FALSE	canonical	3	792	junction_7	79.3047480013369	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815929	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33828855_33829008
ES.25776.28	chr5	+	1936	16	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	249.236754913877	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCAACCCAGGTCCT	NA	False	NA	27	True	ACTAAA	-15	NA	33815929	33829537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33821807_33822052_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.29	chr5	+	2502	14	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	intron_retention	FALSE	canonical	3	792	junction_6	78.0077374405367	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815929	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.3	chr5	+	2676	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	329.496152156158	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815448	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.32	chr5	+	2174	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.097671750958	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCAACCCAGGTCCT	NA	False	NA	27	True	ACTAAA	-15	NA	33815929	33829537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816064_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.33	chr5	+	2212	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	326.370298018327	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGGTCGCCAAGATATA	NA	False	NA	NA	False	AATAAA	-20	NA	33815929	33836326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33835963
ES.25776.34	chr5	+	2063	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	239.805927059907	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815929	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.35	chr5	+	2018	3	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	0	8965	0	-1050	5prime_fragment	FALSE	canonical	3	853	junction_1	42.5	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33815929	33820577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33816072_33818565_33818729_33818864
ES.25776.36	chr5	+	2118	16	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	390.120460029121	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815929	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33817629_33817691_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824413_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.37	chr5	+	2909	12	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	285.613534184028	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.38	chr5	+	4156	14	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	394.411178232556	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822311_33822513_33824090_33824407_33824512_33825306_33825398_33825477_33825590_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.39	chr5	+	3204	12	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_4	282.395683950817	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815929	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826992_33828747_33828855_33829008
ES.25776.4	chr5	+	4607	14	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-6	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	348.86485404886	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815465	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822311_33822513_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.40	chr5	+	4465	13	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	419.996916324659	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822311_33822513_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829007
ES.25776.41	chr5	+	4538	12	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	792	junction_5	82.8289085958131	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.42	chr5	+	2613	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	1	295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.734636286941	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCTGTTATATAAATTT	NA	False	NA	NA	False	NA	NA	NA	33815930	33829840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.44	chr5	+	2316	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	340.527569383455	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815934	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829000_33829130_33829325
ES.25776.45	chr5	+	2821	13	NNC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_4	273.923600459852	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815935	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.47	chr5	+	1924	16	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	248.529273929652	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815943	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33821735_33821980_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.48	chr5	+	1948	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	325.288757122351	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCAACCCAGGTCCT	NA	False	NA	27	True	ACTAAA	-15	NA	33815981	33829537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069_33829130_33829325
ES.25776.49	chr5	+	2045	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	2633	3	2585	-3	3prime_fragment	FALSE	canonical	3	792	junction_6	82.9276436590371	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33818562	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.5	chr5	+	2844	14	ISM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	-458	-3	0	0	intron_retention	FALSE	canonical	3	792	junction_7	85.2006333837612	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815471	33829545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
ES.25776.50	chr5	+	1349	12	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-4216	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	288.790295388789	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	360	False	NA	29	True	ACTAAA	-17	NA	33821788	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33821836_33821980_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.51	chr5	+	4368	7	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-4129	-9	intron_retention	FALSE	canonical	3	792	junction_1	97.7258068952789	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAAAGTCAACCCAGG	447	False	NA	23	True	ACTAAA	-11	NA	33821875	33829533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826992_33828747_33828855_33829008
ES.25776.52	chr5	+	3619	5	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-1536	0	intron_retention	FALSE	canonical	3	792	junction_1	104.318023370844	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	3040	False	NA	32	True	ACTAAA	-20	NA	33824468	33829542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33824512_33825306_33825398_33825477_33825580_33826005_33828855_33829008
ES.25776.6	chr5	+	2766	14	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	32	junction_13	256.867405299554	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815482	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069
ES.25776.7	chr5	+	2490	15	NNC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	-124	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	337.174272144122	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815773	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.8	chr5	+	2443	15	NNC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	-50	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.734636286941	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGGTAGTTCAGCTTGT	NA	False	NA	77	True	NA	NA	NA	33815847	33829587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821481_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25776.9	chr5	+	2247	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	416	6	-10	-3	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCAACCCAGGTCCTGT	NA	False	NA	29	True	ACTAAA	-17	NA	33815887	33829539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ES.25777.1	chr5	-	5286	11	Fusion	ENSMUSG00000004642.14_ENSMUSG00000019295.9	novel	1906	8	NA	NA	-78	-1	multi-exon	FALSE	canonical	2	7	junction_10	512.2054275386	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCCTATACTGTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	33815321	33797399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538_33811959_33812056_33812217_33812666_33813142_33814615
ES.25777.10	chr5	-	1723	8	NNC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	402.083654611976	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	False	NA	-12	True	AATAAA	-14	NA	33809718	33797406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809281_33809424_33809538
ES.25777.11	chr5	-	2656	6	NNC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	10	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	474.193378275151	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	False	NA	-12	True	AATAAA	-14	NA	33809672	33797406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33798273_33799244_33800406_33803140_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.12	chr5	-	3694	5	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	4	-8	intron_retention	FALSE	canonical	3	27	junction_3	496.077614895089	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	False	NA	-12	True	AATAAA	-14	NA	33809693	33797406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33798273_33799244_33801231_33802843_33803414_33809306_33809424_33809538
ES.25777.14	chr5	-	1638	8	NNC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	411.201276500838	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTAACATTGCCCTA	NA	False	NA	-14	True	AATAAA	-12	NA	33809689	33797408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802953_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.15	chr5	-	520	4	ISM	ENSMUSG00000004642.14	ENSMUST00000139518.8	1191	6	-18	2674	-12	-267	5prime_fragment	FALSE	canonical	3	1123	junction_1	52.7720464724355	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTTGTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33809662	33803239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.16	chr5	-	487	4	NNC	ENSMUSG00000004642.14	novel	2922	2	NA	NA	3	-1888	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	567.295533405845	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCCTGGTTTCAGCTTA	NA	False	NA	NA	False	NA	NA	NA	33809694	33806548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33806658_33807086_33807192_33809306_33809424_33809538
ES.25777.17	chr5	-	2455	1	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	1	1727	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACGACAGGAATACTTA	NA	False	NA	NA	False	NA	NA	NA	33809696	33807241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33807200_33809700
ES.25777.18	chr5	-	3180	4	NIC	ENSMUSG00000019295.9	novel	2828	4	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	28.5773803324704	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTCATTTTGTTTAA	NA	False	NA	0	True	AATAAA	-18	NA	33815762	33810560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33811959_33812056_33812217_33812666_33813142_33814615
ES.25777.2	chr5	-	1575	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	419.837270062263	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGCCCTATACTGTTT	NA	False	NA	-6	True	AATAAA	-20	NA	33809694	33797400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33809306_33809424_33809538
ES.25777.20	chr5	-	2832	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	-5	1	-5	-1	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTCATTTTGTTTAA	NA	False	NA	0	True	AATAAA	-18	NA	33815765	33810560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
ES.25777.21	chr5	-	2764	3	NIC	ENSMUSG00000019295.9	novel	2828	4	NA	NA	-5	1	intron_retention	FALSE	canonical	3	50	junction_2	11	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTACTTCATTTTGTTTA	NA	False	NA	-1	True	AATAAA	-17	NA	33815248	33810561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33811959_33812056_33813142_33814966
ES.25777.22	chr5	-	4147	3	ISM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	-15	1	-15	-1	intron_retention	FALSE	canonical	3	62	junction_2	5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTACTTCATTTTGTT	NA	False	NA	-3	True	AATAAA	-15	NA	33815258	33810563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33811959_33812056_33812217_33812666
ES.25777.3	chr5	-	2060	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	1123	junction_4	42.0254552490379	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTGCCCTATACTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	33809703	33797401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.4	chr5	-	3421	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	1110	junction_3	45.6864312460494	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATTGCCCTATACTGT	NA	False	NA	-8	True	AATAAA	-18	NA	33809683	33797402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33798273_33799244_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.5	chr5	-	1615	7	FSM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	-43	6	4	-6	multi-exon	FALSE	canonical	2	22	junction_4	432.7992863005	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACATTGCCCTATACT	NA	False	NA	-10	True	AATAAA	-16	NA	33809693	33797404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33807086_33807192_33809306_33809424_33809538
ES.25777.6	chr5	-	4774	5	NIC	ENSMUSG00000004642.14	novel	1191	6	NA	NA	3	-6	intron_retention	FALSE	canonical	3	1123	junction_2	46.0298815988049	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACATTGCCCTATACT	NA	False	NA	-10	True	AATAAA	-16	NA	33809694	33797404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33801231_33802843_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.7	chr5	-	4371	6	FSM	ENSMUSG00000004642.14	ENSMUST00000139518.8	1191	6	-20	-3160	-14	-7	multi-exon	FALSE	canonical	3	1110	junction_2	48.586417855199	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAACATTGCCCTATAC	NA	False	NA	-11	True	AATAAA	-15	NA	33809664	33797405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.8	chr5	-	2614	7	ISM	ENSMUSG00000004642.14	ENSMUST00000075670.13	1027	8	27	5111	-12	-8	5prime_fragment	FALSE	canonical	3	1110	junction_3	45.8899650129403	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	False	NA	-12	True	AATAAA	-14	NA	33809662	33797406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ES.25777.9	chr5	-	3800	6	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	3	-8	intron_retention	FALSE	canonical	3	1123	junction_3	41.6960429777215	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	False	NA	-12	True	AATAAA	-14	NA	33809694	33797406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33798273_33799244_33801231_33802843_33803414_33807086_33807192_33809306_33809424_33809538
ES.25778.1	chr5	-	157	1	Intergenic	novelGene_21473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATACATA	NA	False	NA	NA	False	NA	NA	NA	33868742	33868585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33868600_33868700
ES.25779.1	chr5	+	4072	17	NIC	ENSMUSG00000054252.19	novel	4218	18	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	4.49305018890286	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTCGATTTCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	33879104	33894408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33879273_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892757
ES.25779.2	chr5	+	4197	18	FSM	ENSMUSG00000054252.19	ENSMUST00000169212.9	4245	18	47	1	-20	0	multi-exon	FALSE	canonical	1	2	junction_1	4.36564125065399	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCGATTTCTGTTCTG	NA	False	NA	13	True	AATAAA	-20	NA	33879114	33894411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33879299_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.25779.3	chr5	+	4158	18	FSM	ENSMUSG00000054252.19	ENSMUST00000067150.14	4218	18	58	2	-9	2	multi-exon	FALSE	canonical	2	4	junction_16	3.88235294117647	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTCGATTTCTGTTC	NA	False	NA	11	True	AATAAA	-18	NA	33879125	33894409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33879273_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.25779.4	chr5	+	4102	17	NNC	ENSMUSG00000054252.19	novel	2630	17	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5.01092556320686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTGCCTCGATTTCTG	NA	False	NA	8	True	AATAAA	-15	NA	33879130	33894406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33879273_33879649_33879856_33884990_33885261_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890263_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.25779.5	chr5	+	3680	16	NNC	ENSMUSG00000054252.19	novel	4218	18	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.75347825866024	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGAGTGCCTCGATT	NA	False	NA	4	True	AATAAA	-11	NA	33879133	33894402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33879270_33885519_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.25779.6	chr5	+	4095	17	FSM	ENSMUSG00000054252.19	ENSMUST00000087820.8	2630	17	-8	-1457	-1	1	multi-exon	FALSE	canonical	2	2	junction_3	4.39770892056307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTCGATTTCTGTT	NA	False	NA	10	True	AATAAA	-17	NA	33879133	33894408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33879273_33879649_33879856_33884990_33885261_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.25779.9	chr5	+	3083	11	NNC	ENSMUSG00000054252.19	novel	3960	16	NA	NA	-1226	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.93558507170123	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGCCTCGATTTCTGT	NA	False	NA	9	True	AATAAA	-16	NA	33889369	33894407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33889606_33890065_33890257_33890600_33890745_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ES.2578.1	chr10	+	174	1	Intergenic	novelGene_1953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAAAAGACTATGAAGG	NA	False	NA	NA	False	NA	NA	NA	34201657	34201831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_34201700_34201800
ES.25780.1	chr5	+	3162	1	Antisense	novelGene_ENSMUSG00000005299.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	33939871	33943033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_33939900_33943000
ES.25781.1	chr5	-	2831	15	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.413673920659	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTACAGTGGTGTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	33940042	33897016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33897462_33899783_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.10	chr5	-	2637	14	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	0	213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	112.349465360828	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAATTTTTAATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	33940081	33899664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904948_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.12	chr5	-	5926	11	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-2	213	intron_retention	FALSE	canonical	3	324	junction_5	33.4426374557988	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAATTTTTAATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	33940163	33899664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.14	chr5	-	3833	14	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-2	211	intron_retention	FALSE	non_canonical	0	0	junction_5	161.633415316096	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCAATTTTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	33940060	33899666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33899957_33900985_33902548_33903583_33903719_33904719_33904855_33905504_33905647_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33927560_33927637_33935951_33936013_33939817
ES.25781.15	chr5	-	2610	15	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	7	210	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	138.576362209669	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGCAATTTTTAATT	NA	False	NA	NA	False	AATAAA	-14	NA	33940074	33899667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33927560_33927637_33935951_33936013_33939817
ES.25781.16	chr5	-	3753	13	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	0	210	intron_retention	FALSE	canonical	3	324	junction_7	42.0891910114699	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGCAATTTTTAATT	NA	False	NA	NA	False	AATAAA	-14	NA	33940058	33899667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33899957_33900985_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.18	chr5	-	2482	14	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-5	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.398965796814	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAAGCAATTTTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	33940086	33899668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918208_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.19	chr5	-	3773	14	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-1187	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.724241952617	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAAGCAATTTTTAAT	7342	False	NA	NA	False	AATAAA	-13	NA	33928985	33899668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909119_33909253_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33927560
ES.25781.2	chr5	-	5213	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	55	4	-25	-4	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTGTACAGTGGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	33940106	33897020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.21	chr5	-	3993	12	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-2	207	intron_retention	FALSE	canonical	3	324	junction_6	49.2514210895365	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAATGAAGCAATTTTTA	NA	False	NA	NA	False	AATAAA	-11	NA	33940060	33899670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33899957_33900985_33901125_33902359_33903719_33904719_33904855_33905504_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.22	chr5	-	3609	6	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	103	18680	0	3359	5prime_fragment	FALSE	canonical	3	340	junction_1	33.0175710796539	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCCCTATTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	33940058	33915696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.3	chr5	-	3181	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	101	1990	-2	871	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATCTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	33940060	33899006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.4	chr5	-	2596	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	34	2642	34	219	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAATTTTCATCATT	NA	False	NA	NA	False	AATAAA	-23	NA	33940127	33899658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.5	chr5	-	3568	13	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-7	217	intron_retention	FALSE	canonical	3	324	junction_7	47.9493366887269	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	AATAAA	-21	NA	33940065	33899660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33899957_33900985_33901125_33902359_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ES.25781.7	chr5	-	3880	12	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	11347	2646	-1016	215	3prime_fragment	FALSE	canonical	3	324	junction_8	48.0321861785502	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATTTTTAATTTTCAT	7513	False	NA	NA	False	AATAAA	-19	NA	33928814	33899662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704
ES.25781.9	chr5	-	5296	11	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	-1198	214	intron_retention	FALSE	canonical	3	324	junction_7	42.6156074695645	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAATTTTTAATTTTCA	7331	False	NA	NA	False	AATAAA	-18	NA	33928996	33899663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_33899957_33900985_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704
ES.25782.1	chr5	-	182	1	Intergenic	novelGene_21474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTTTGTAGAGCC	NA	False	NA	NA	False	NA	NA	NA	33964389	33964207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33964200_33964400
ES.25783.1	chr5	+	5480	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-803	2465	-803	6	multi-exon	TRUE	canonical	3	189	junction_2	30.2485912519455	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTTTATCTTA	NA	False	NA	48	True	ATTAAA	-25	NA	33977265	34052845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.10	chr5	+	4954	10	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-346	26616	-346	-1152	5prime_fragment	FALSE	canonical	3	189	junction_2	35.8074411192167	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTCCCTTAGTAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	33977722	34028694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097
ES.25783.100	chr5	+	3659	19	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	11496	2473	-6461	-2	3prime_fragment	FALSE	canonical	3	219	junction_8	23.4384536843007	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	34011951	34052837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.102	chr5	+	5779	18	NNC	ENSMUSG00000057406.17	novel	4633	21	NA	NA	-5630	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.6773125843613	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTCTTACACTTATTT	NA	False	NA	10	True	ATTAAA	-13	NA	34012782	34055308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34013081_34018377_34018523_34021997_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.103	chr5	+	3017	17	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	17920	2465	-37	6	3prime_fragment	FALSE	canonical	3	219	junction_6	24.7297107494204	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTTTATCTTA	NA	False	NA	48	True	ATTAAA	-25	NA	34018375	34052845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.104	chr5	+	5772	2	NNC	ENSMUSG00000057406.17	novel	6323	5	NA	NA	-6752	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGACTGGTTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	34028806	34034625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34032004_34032050
ES.25783.105	chr5	+	6664	13	ISM	ENSMUSG00000057406.17	ENSMUST00000141416.5	4473	21	31733	0	-3286	0	3prime_fragment	FALSE	canonical	3	219	junction_2	25.3541581073664	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	34032272	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.106	chr5	+	6363	13	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	34588	1	-515	-1	3prime_fragment	FALSE	canonical	3	219	junction_2	25.3541581073664	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTACACTTATTTA	NA	False	NA	11	True	ATTAAA	-14	NA	34035043	34055309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.107	chr5	+	4780	13	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	35944	228	-95	-228	3prime_fragment	FALSE	canonical	3	219	junction_2	25.3541581073664	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGTCTAAACTTCATAC	NA	False	NA	6	True	ATTAAA	-19	NA	34036399	34055082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.108	chr5	+	2388	13	NNC	ENSMUSG00000057406.17	novel	6919	21	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.0501279831658	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	34036423	34052837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042873_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.109	chr5	+	4876	12	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	36937	1	898	-1	3prime_fragment	FALSE	canonical	3	219	junction_1	26.3896423458238	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTACACTTATTTA	NA	False	NA	11	True	ATTAAA	-14	NA	34037392	34055309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.11	chr5	+	7502	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-345	-15	-345	6	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATGTAACTGTGTCT	NA	False	NA	27	True	ATTAAA	-30	NA	33977723	34055325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.110	chr5	+	4749	11	ISM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	37874	2	1835	-2	3prime_fragment	FALSE	canonical	3	228	junction_5	23.3856793786283	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTCTTACACTTATTT	NA	False	NA	10	True	ATTAAA	-13	NA	34038329	34055308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.12	chr5	+	4944	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-343	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977725	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.13	chr5	+	8306	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-342	1	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_11	94.2457662858652	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGACTGGTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	33977726	34034627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750_34031995_34032043
ES.25783.14	chr5	+	5489	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-335	1988	-335	266	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGGAGGTAACCACAGTA	NA	False	NA	NA	False	TATAAA	-12	NA	33977733	34053322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.16	chr5	+	3619	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-331	16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	83.9163869574948	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAAGTATACATTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	33977737	34029862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028710
ES.25783.18	chr5	+	7175	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-331	-228	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGTCTAAACTTCATAC	NA	False	NA	6	True	ATTAAA	-19	NA	33977737	34055082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.19	chr5	+	7243	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-329	228	-329	-228	multi-exon	FALSE	canonical	3	189	junction_2	30.2485912519455	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGTCTAAACTTCATAC	NA	False	NA	6	True	ATTAAA	-19	NA	33977739	34055082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.2	chr5	+	5006	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-372	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	58.7572397508639	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977696	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979036_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.21	chr5	+	4995	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-325	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.1090510129431	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAACTGGCATGTGAAA	NA	False	NA	35	True	ATTAAA	-12	NA	33977743	34052832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34021997_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.23	chr5	+	8342	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-324	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	74.4366173331379	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTTTGTGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-27	NA	33977744	34034632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.24	chr5	+	2605	10	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-324	-881	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGACCAAGGTAAGAT	NA	False	NA	NA	False	AATAAA	-30	NA	33977744	34028965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.25	chr5	+	4895	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-323	6	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_13	59.1756210971326	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAATGCTTTTATCTTA	NA	False	NA	48	True	ATTAAA	-25	NA	33977745	34052845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039436_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.27	chr5	+	8199	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-305	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	111.349719353037	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGACTGGTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	33977763	34034627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750_34031995_34032043
ES.25783.28	chr5	+	4833	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-294	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	63.3385246708746	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977774	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.29	chr5	+	4899	24	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-285	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6278430237828	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977783	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33977821_33977877_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.3	chr5	+	3703	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-371	105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.735047573844	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTAGCTCTGTTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	33977697	34029951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979007_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.32	chr5	+	5166	18	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-197	10856	-197	-593	5prime_fragment	FALSE	canonical	3	189	junction_2	29.6131926085417	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGCAATCTTTATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	33977871	34044454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725
ES.25783.34	chr5	+	5122	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-91	213	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	51.8276841421399	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCAGCTAAACTGTATC	NA	False	NA	NA	False	AAAACA	-2	NA	33977977	34053269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.35	chr5	+	4589	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-88	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	62.8731941987429	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCATGTGAAATGCT	NA	False	NA	39	True	ATTAAA	-16	NA	33977980	34052836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.36	chr5	+	4904	23	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	-77	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	84.9883317222171	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33977991	34052837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750_34028979_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.38	chr5	+	5433	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-69	479	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	54.8431459815812	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTAGACTGTCTGTCCT	NA	False	NA	NA	False	TTTAAA	-15	NA	33977999	34053535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.39	chr5	+	7118	22	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.1751092593432	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTACACTTATTTA	NA	False	NA	11	True	ATTAAA	-14	NA	33978008	34055309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036521_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.4	chr5	+	7441	22	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	-358	5	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	69.2052388144502	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATATGTAACTGTGTC	NA	False	NA	26	True	ATTAAA	-29	NA	33977710	34055324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.40	chr5	+	5661	4	NNC	ENSMUSG00000057406.17	novel	5738	10	NA	NA	-59	4712	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	111.776562838549	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGATAGTCCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	33978009	34008238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979036_34000455_34001082_34003448
ES.25783.41	chr5	+	2395	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-55	-892	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	74.4366173331379	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGATAACAAATTTTAAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	33978013	34028954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.42	chr5	+	4643	24	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	60.6278430237828	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978016	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042793_34042872_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.44	chr5	+	3282	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	74.4366173331379	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATTCTATTTTTAACC	NA	False	NA	NA	False	AATAAA	-14	NA	33978018	34029846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.45	chr5	+	8008	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-47	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	98.124309757008	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGACTGGTTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	33978021	34034625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750_34032013_34032062
ES.25783.46	chr5	+	3241	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	100.480644902389	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATTCTATTTTTAACC	NA	False	NA	NA	False	AATAAA	-14	NA	33978022	34029846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979036_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.47	chr5	+	4531	9	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-42	-1201	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	76.663122653594	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGCCTGTGAAGGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	33978026	34028645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097
ES.25783.48	chr5	+	3305	10	NIC	ENSMUSG00000057406.17	novel	7786	9	NA	NA	-41	105	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	111.848221672756	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTAGCTCTGTTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	33978027	34029951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750
ES.25783.49	chr5	+	7335	23	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	93.8340807529109	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTACACTTATTTA	NA	False	NA	11	True	ATTAAA	-14	NA	33978029	34055309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750_34028979_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.5	chr5	+	2806	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-357	-899	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	124.794575003937	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAACAGATAACAAATT	NA	False	NA	NA	False	AATAAA	-12	NA	33977711	34028947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_33995425_33995538_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026093_34026223_34028750
ES.25783.50	chr5	+	5077	22	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-38	3399	-38	-528	5prime_fragment	FALSE	canonical	3	189	junction_2	30.6525403725779	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTCTTGTGTTAATTT	NA	False	NA	NA	False	AATGAA	-3	NA	33978030	34051911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748
ES.25783.51	chr5	+	6568	10	NIC	ENSMUSG00000057406.17	novel	7786	9	NA	NA	-32	-1403	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	111.848221672756	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGACATTCTGTGGACT	NA	False	NA	NA	False	ATTAAA	-13	NA	33978036	34033223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750
ES.25783.52	chr5	+	10497	9	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-27	0	intron_retention	FALSE	canonical	3	46	junction_1	76.663122653594	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33978041	34034626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097
ES.25783.54	chr5	+	3345	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-24	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	114.443316656206	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAATAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	33978044	34029827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_33995429_33995538_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.55	chr5	+	8002	10	NNC	ENSMUSG00000057406.17	novel	7786	9	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	117.841806495083	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33978045	34034626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028710
ES.25783.56	chr5	+	5798	10	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-23	25449	-23	15	5prime_fragment	FALSE	canonical	3	189	junction_2	35.8074411192167	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAAGTATACATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	33978045	34029861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097
ES.25783.57	chr5	+	5106	10	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-23	1921	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTGTGTTTATGTAC	NA	False	NA	NA	False	AATAAA	-36	NA	33978045	34031767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.59	chr5	+	6937	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-22	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.8335709454643	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTGGTGTCTAAACTT	NA	False	NA	1	True	ATTAAA	-14	NA	33978046	34055077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042441_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.6	chr5	+	5130	24	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	76.8662698487034	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977721	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_33995425_33995538_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.60	chr5	+	4567	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-22	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	62.2982730894844	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAACTGGCATGTGAAA	NA	False	NA	35	True	ATTAAA	-12	NA	33978046	34052832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.62	chr5	+	3904	21	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	62.5330912397588	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978046	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.63	chr5	+	5364	22	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-21	3095	-21	-224	5prime_fragment	FALSE	canonical	3	189	junction_2	30.6525403725779	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCATTTGCTGATAGT	NA	False	NA	NA	False	AATATA	-19	NA	33978047	34052215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748
ES.25783.65	chr5	+	7154	21	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-21	0	intron_retention	FALSE	canonical	3	189	junction_2	31.7147836190001	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978047	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.66	chr5	+	4920	24	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	74.1027233682137	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978047	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750_34028979_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.67	chr5	+	3793	6	ISM	ENSMUSG00000057406.17	ENSMUST00000114397.9	5738	10	-39	14655	-20	11665	5prime_fragment	FALSE	canonical	3	189	junction_2	40.6693988153255	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33978048	34015191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597
ES.25783.7	chr5	+	4893	24	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.6278430237828	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33977721	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33977991_33978115_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.71	chr5	+	4681	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	60.9540031160199	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGGCATGTGAAATGC	NA	False	NA	38	True	ATTAAA	-15	NA	33978048	34052835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049289_34049391_34050748_34050954_34052249
ES.25783.72	chr5	+	7137	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-18	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	58.7572397508639	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATATGTAACTGTGTC	NA	False	NA	26	True	ATTAAA	-29	NA	33978050	34055324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979036_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.73	chr5	+	4672	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.8402534127146	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGGCATGTGAAATGC	NA	False	NA	38	True	ATTAAA	-15	NA	33978050	34052835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012108_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.74	chr5	+	2385	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-12	-899	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	83.9163869574948	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAACAGATAACAAATT	NA	False	NA	NA	False	AATAAA	-12	NA	33978056	34028947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028710
ES.25783.75	chr5	+	8013	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	100.613982893627	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCAGGACTGGTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	33978056	34034624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028710_34031995_34032043
ES.25783.76	chr5	+	4269	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-12	-1155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.4653775223908	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTTGTTCCCTTAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	33978056	34028691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34026570
ES.25783.77	chr5	+	5041	21	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-12	-468	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	52.8388824635798	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATGCTGATATGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	33978056	34051971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748
ES.25783.78	chr5	+	4533	23	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.8335709454643	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978057	34052837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042872_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.79	chr5	+	5974	22	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	-11	2475	-11	-4	intron_retention	FALSE	canonical	3	189	junction_2	30.6525403725779	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGGCATGTGAAATGC	NA	False	NA	38	True	ATTAAA	-15	NA	33978057	34052835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748
ES.25783.8	chr5	+	3591	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-346	106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.383035890983	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTAGCTCTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	33977722	34029952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33977987_33978116_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028713
ES.25783.80	chr5	+	5201	11	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-11	1921	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	84.1907952213305	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTGTGTTTATGTAC	NA	False	NA	NA	False	AATAAA	-36	NA	33978057	34031767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028713
ES.25783.81	chr5	+	4201	10	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-11	-1152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	106.20885550487	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTCCCTTAGTAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	33978057	34028694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34026570
ES.25783.84	chr5	+	4505	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	74.1371224500255	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATGTGAAATGCTTTT	NA	False	NA	42	True	ATTAAA	-19	NA	33978060	34052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040246_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.85	chr5	+	5339	8	ISM	ENSMUSG00000057406.17	ENSMUST00000114397.9	5738	10	-20	4312	-1	-4312	intron_retention	FALSE	canonical	3	189	junction_2	39.9167501028767	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACCTTTTGACCTGTGT	NA	False	NA	NA	False	AGTAAA	-12	NA	33978067	34025534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003
ES.25783.86	chr5	+	5140	11	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	1	1909	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	74.4366173331379	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGATGCCT	NA	False	NA	NA	False	AATAAA	-24	NA	33978069	34031755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.87	chr5	+	7937	10	NIC	ENSMUSG00000057406.17	novel	7786	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33978073	34034626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.88	chr5	+	4306	9	NNC	ENSMUSG00000057406.17	novel	5738	10	NA	NA	6	1909	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	116.967677159119	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGATGCCT	NA	False	NA	NA	False	AATAAA	-24	NA	33978074	34031755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979036_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750
ES.25783.89	chr5	+	3798	20	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	62.9678280427478	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCATGTGAAATGCT	NA	False	NA	39	True	ATTAAA	-16	NA	33978079	34052836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.9	chr5	+	4783	24	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-346	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.8774341831103	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCATGTGAAATGCT	NA	False	NA	39	True	ATTAAA	-16	NA	33977722	34052836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33977992_33978117_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039436_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.90	chr5	+	5519	22	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	189	junction_2	30.9505493963598	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCATGTGAAATGCT	NA	False	NA	39	True	ATTAAA	-16	NA	33978079	34052836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.91	chr5	+	7006	10	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-8	-925	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACTCAATGTGTATCA	NA	False	NA	NA	False	NA	NA	NA	33978079	34033701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.92	chr5	+	7089	12	NNC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-8	-903	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	100.613982893627	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGAAGGGCAGGGGTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	33978079	34033723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028710_34031995_34032043
ES.25783.93	chr5	+	3112	10	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	12	-19	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	98.0088179454366	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAATAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	33978099	34029827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34028750
ES.25783.95	chr5	+	6908	22	NIC	ENSMUSG00000057406.17	novel	7153	22	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	85.5306233365844	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTACACTTATTTA	NA	False	NA	11	True	ATTAAA	-14	NA	33978124	34055309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_33978222_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040246_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.96	chr5	+	5121	22	ISM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	329	2473	225	-2	3prime_fragment	FALSE	canonical	3	189	junction_1	27.5207610768567	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATGTGAAATGCTT	NA	False	NA	40	True	ATTAAA	-17	NA	33978397	34052837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ES.25783.97	chr5	+	10234	9	NNC	ENSMUSG00000057406.17	novel	6919	21	NA	NA	3	-2	intron_retention	FALSE	canonical	3	20	junction_8	85.2158105928706	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCAGGACTGGTTTGTG	3701	False	NA	NA	False	AATAAA	-19	NA	34000487	34034624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34031995_34032043
ES.25783.98	chr5	+	5406	3	NIC	ENSMUSG00000057406.17	novel	7786	9	NA	NA	457	11695	intron_retention	FALSE	canonical	3	268	junction_2	6	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGACAAAAT	62	False	NA	NA	False	NA	NA	NA	34000996	34015221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34003612_34011953_34012121_34012597
ES.25783.99	chr5	+	3438	1	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	-6627	11697	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGACAAAATGG	NA	False	NA	NA	False	NA	NA	NA	34011785	34015223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34011800_34015200
ES.25784.1	chr5	+	5391	2	Antisense	novelGene_ENSMUSG00000029111.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGGGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34061237	34074780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_34061473_34069624
ES.25785.1	chr5	+	3528	1	Intergenic	novelGene_21476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATGTATGAATCTAGGA	NA	False	NA	NA	False	NA	NA	NA	34087082	34090610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34087100_34090600
ES.25785.2	chr5	+	3155	1	Intergenic	novelGene_21477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34088453	34091608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34088500_34091600
ES.25786.1	chr5	-	2184	1	Intergenic	novelGene_21475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGAGACCCCCTACT	NA	False	NA	NA	False	NA	NA	NA	33977954	33975770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_33975800_33978000
ES.25787.1	chr5	-	5759	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	157	-3336	-6	3336	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCCTGCTTTTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	34093600	34051923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.10	chr5	-	2254	10	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-1	-266	intron_retention	FALSE	canonical	3	561	junction_4	32.3434501164007	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCCCACAGAGCTG	NA	False	NA	-13	True	ATTAAA	-14	NA	34093595	34055525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.12	chr5	-	2278	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-62	-266	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	216.940407706512	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCCCACAGAGCTG	NA	False	NA	-13	True	ATTAAA	-14	NA	34093656	34055525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34085642_34085708_34093369
ES.25787.15	chr5	-	2350	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	1	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	235.116746101848	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCCCACAGAGCTG	NA	False	NA	-13	True	ATTAAA	-14	NA	34093593	34055525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34070294_34070495_34077835_34077998_34079189_34079362_34093369
ES.25787.16	chr5	-	2133	11	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-6	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	183.793062981169	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAAAGCCCACAGAGC	NA	False	NA	-15	True	ATTAAA	-12	NA	34093600	34055527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056876_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.17	chr5	-	3045	9	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	10	-323	intron_retention	FALSE	canonical	3	561	junction_3	33.8341543414343	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGTTCTTATTTTCA	NA	False	NA	-29	True	NA	NA	NA	34093584	34055582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34056456_34056625_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.18	chr5	-	1833	10	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	4	-490	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	190.607799770454	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTCTTTCTCTCTCC	NA	False	NA	NA	False	AAAAAG	-12	NA	34093590	34055749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34077835_34077998_34079189_34079362_34093369
ES.25787.19	chr5	-	1830	10	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	1	-502	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	195.321956437741	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGCTGAGAGGGCTTT	NA	False	NA	NA	False	TTTAAA	-13	NA	34093593	34055761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057874_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.2	chr5	-	3442	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	123	-985	-40	985	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGATTTTACTTAAGT	NA	False	NA	NA	False	TATAAA	-19	NA	34093634	34054274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.20	chr5	-	1983	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	95	502	-68	-502	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGCTGAGAGGGCTTT	NA	False	NA	NA	False	TTTAAA	-13	NA	34093662	34055761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.21	chr5	-	1448	9	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	31938	-517	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	198.228994788855	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTACT	NA	False	NA	NA	False	NA	NA	NA	34061656	34055776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34061549
ES.25787.22	chr5	-	2029	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-64	-517	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	216.940407706512	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTACT	NA	False	NA	NA	False	NA	NA	NA	34093658	34055776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34085642_34085708_34093369
ES.25787.23	chr5	-	1892	11	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	1	-518	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	181.519723446242	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	34093593	34055777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058618_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.3	chr5	-	3491	10	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	4	976	intron_retention	FALSE	canonical	3	561	junction_4	32.3434501164007	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAAATCCCAAGATTT	NA	False	NA	NA	False	TATAAA	-10	NA	34093590	34054283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.4	chr5	-	2564	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	12	4	12	-4	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGATTTTCCACTTTAAA	NA	False	NA	-4	True	AATAAA	-25	NA	34093745	34055263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.5	chr5	-	2398	11	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	182.618618985031	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGATTTTCCACTTTA	NA	False	NA	-6	True	AATAAA	-23	NA	34093587	34055265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079356_34093369
ES.25787.6	chr5	-	2358	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	-31	253	-31	-253	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTGTTTCAGGCGAG	NA	False	NA	0	True	ATTAAA	-27	NA	34093788	34055512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.7	chr5	-	3016	10	NIC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	1	-259	intron_retention	FALSE	canonical	3	561	junction_4	33.4468437677562	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	34093593	34055518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34056254_34056355_34056456_34056625_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ES.25787.8	chr5	-	2263	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	-43	-259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	233.427533129964	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACAGAGCTGTGTTTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	34093637	34055518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34087234_34087297_34093369
ES.25788.1	chr5	+	489	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	21	1	-19	-1	multi-exon	FALSE	canonical	3	25	junction_1	4.98887651569859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTGTCCTGTATTTT	NA	False	NA	4	True	AATAAA	-12	NA	34140834	34142352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
ES.25788.2	chr5	+	388	4	FSM	ENSMUSG00000070858.13	ENSMUST00000094869.12	477	4	84	5	7	-1	multi-exon	FALSE	canonical	3	9	junction_1	12.3648246606609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTGTCCTGTATTTT	NA	False	NA	4	True	AATAAA	-12	NA	34140860	34142352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34140909_34141100_34141241_34141395_34141485_34142241
ES.25789.1	chr5	+	7584	2	NIC	ENSMUSG00000048142.10	novel	6529	3	NA	NA	103	0	intron_retention	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCTGTGATTCTTTG	NA	False	NA	25	True	AATAAA	-17	NA	34153430	34163260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34155878_34158123
ES.25789.2	chr5	+	3063	3	FSM	ENSMUSG00000048142.10	ENSMUST00000056355.9	6529	3	626	2840	626	2233	multi-exon	FALSE	canonical	2	3	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTTTCTGTTTGGAT	NA	False	NA	18	True	AAAACA	-16	NA	34153953	34160420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34154555_34155712_34155878_34158123
ES.25789.3	chr5	+	5895	3	FSM	ENSMUSG00000048142.10	ENSMUST00000056355.9	6529	3	635	-1	635	1	multi-exon	FALSE	canonical	2	3	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCTGTGATTCTTTGA	NA	False	NA	26	True	AATAAA	-18	NA	34153962	34163261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34154555_34155712_34155878_34158123
ES.2579.1	chr10	+	1166	1	Intergenic	novelGene_1955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATCTCTGGTACACC	NA	False	NA	NA	False	NA	NA	NA	34276741	34277907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_34276700_34277900
ES.25790.1	chr5	-	2909	25	FSM	ENSMUSG00000045102.13	ENSMUST00000042954.11	2897	25	9	-21	9	2	multi-exon	FALSE	canonical	0	0	junction_3	1.41359962114061	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTGAGTGGGCTC	9414	False	NA	NA	False	AGTAAA	-23	NA	34326783	34164520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34164854_34166183_34166246_34166930_34166999_34170845_34170925_34171586_34171698_34181649_34181782_34190089_34190173_34234440_34234556_34236259_34236338_34237245_34237304_34261241_34261308_34262519_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703_34272773_34274152_34274311_34276229_34276343_34279949_34280141_34286446_34286948_34290454_34290535_34307060_34307206_34326733
ES.25790.11	chr5	-	2061	6	NNC	ENSMUSG00000079555.3	novel	2073	5	NA	NA	-3	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.912790338761	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTGAAGAGTTCTAA	9417	False	NA	-39	True	AATAAA	-12	NA	34326780	34311262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34311451_34312653_34312772_34320866_34321096_34323259_34323700_34324748_34325788_34326733
ES.25790.12	chr5	-	1762	5	NIC	ENSMUSG00000079555.3	novel	2073	5	NA	NA	-7	-39	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	205.717038672056	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTGAAGAGTTCTAA	9413	False	NA	-39	True	AATAAA	-12	NA	34326784	34311262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325603_34326733
ES.25790.13	chr5	-	4566	2	ISM	ENSMUSG00000079555.3	ENSMUST00000201069.2	3565	3	48	0	33	0	intron_retention	FALSE	canonical	3	526	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAGAA	9453	False	NA	NA	False	AAGAAA	-9	NA	34326744	34320014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34321096_34323259
ES.25790.2	chr5	-	2786	23	NIC	ENSMUSG00000045102.13	novel	2736	24	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.47499824905345	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTCATCCTTGTG	9406	False	NA	NA	False	AGTAAA	-12	NA	34326791	34164531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34164854_34166183_34166246_34166930_34166999_34170845_34170925_34171586_34171698_34181649_34181782_34190089_34190173_34234440_34234556_34236259_34236338_34237245_34237304_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703_34272773_34274152_34274311_34276229_34276343_34279949_34280141_34286446_34286948_34290454_34290535_34307060_34307206_34326733
ES.25790.3	chr5	-	3399	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	5871	-3038	56	3038	3prime_fragment	FALSE	canonical	3	463	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTCAAAGTTTTTTG	NA	False	NA	NA	False	TTTAAA	-6	NA	34321000	34308185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34311451_34320866
ES.25790.4	chr5	-	2066	6	NIC	ENSMUSG00000079555.3	novel	2073	5	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	227.84327947078	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTGCTGTGTTTTTGT	9413	False	NA	-4	True	NA	NA	NA	34326784	34311227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326114_34326199_34326733
ES.25790.5	chr5	-	2068	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	-1	6	-1	-6	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGCCTGCTGTGTTTTT	9953	False	NA	-6	True	AATAAA	-45	NA	34326872	34311229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
ES.25790.6	chr5	-	2930	4	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	78	11	-1	-11	intron_retention	FALSE	canonical	3	453	junction_3	32.3144274623924	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTATGCCTGCTGTG	9404	False	NA	-11	True	AATAAA	-40	NA	34326793	34311234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748
ES.25790.9	chr5	-	6110	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	87	35	-7	-35	intron_retention	FALSE	canonical	3	463	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAGAGTTCTAAAAAC	9413	False	NA	-35	True	AATAAA	-16	NA	34326784	34311258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34311451_34320866
ES.25791.1	chr5	-	3788	7	NNC	ENSMUSG00000037235.14	novel	3872	6	NA	NA	-2	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	2.6718699236469	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTGGTTTCTAGTTA	NA	False	NA	NA	False	TATAAA	-19	NA	34345056	34331231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34333823_34333907_34334494_34334941_34335105_34336153_34336269_34341657_34341688_34344672_34344773_34344853
ES.25792.1	chr5	+	215	1	Intergenic	novelGene_21478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCACTTGTCTCTGCTG	6332	False	NA	NA	False	NA	NA	NA	34416797	34417012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34416800_34417000
ES.25793.1	chr5	+	217	1	Intergenic	novelGene_21479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGCCCGATGGTGGT	7342	False	NA	NA	False	NA	NA	NA	34417807	34418024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34417800_34418000
ES.25794.1	chr5	-	6221	11	NNC	ENSMUSG00000037224.16	novel	3983	13	NA	NA	-1324	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.19756061276768	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGCGTCTTCTATGAA	NA	False	NA	1	True	CATAAA	-21	NA	34391686	34352233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34370873_34371410_34371553_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628
ES.25794.11	chr5	-	5985	9	Fusion	ENSMUSG00000037224.16_ENSMUSG00000086291.2	novel	712	4	NA	NA	46	-984	intron_retention	FALSE	canonical	2	11	junction_3	7.31009575860672	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTTCTGTATGCAGTC	NA	False	NA	NA	False	NA	NA	NA	34445735	34370137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_34371410_34371553_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.12	chr5	-	2770	6	NNC	ENSMUSG00000037224.16	novel	3983	13	NA	NA	-2932	1791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.1862652625975	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTTATACATTGTGG	NA	False	NA	NA	False	AAGAAA	-18	NA	34393294	34373155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393063
ES.25794.13	chr5	-	3288	8	ISM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-248	20925	-125	1785	5prime_fragment	FALSE	canonical	2	11	junction_2	7.32343178170074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGTGGTTTTATACA	NA	False	NA	NA	False	AAGAAA	-12	NA	34445918	34373161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.14	chr5	-	2284	8	NIC	ENSMUSG00000037224.16	novel	712	4	NA	NA	2	-520	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.6303613925986	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGTCACAATATTCT	NA	False	NA	NA	False	TTTAAA	-12	NA	34445779	34375551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34376735_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.15	chr5	-	1823	8	NIC	ENSMUSG00000037224.16	novel	712	4	NA	NA	-17	-1012	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.6303613925986	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTGTGTATTGATT	NA	False	NA	NA	False	AAAAAG	-18	NA	34445810	34376043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34376735_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.16	chr5	-	5904	6	ISM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-109	32356	2	-661	5prime_fragment	FALSE	canonical	3	25	junction_1	2.92574776766556	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGGTGTTTGTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	34445779	34384592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.18	chr5	-	1315	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	-14	-1320	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.97914491994847	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAAATTTTTTATTAG	NA	False	NA	NA	False	AATAAA	-15	NA	34445807	34385251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34385540_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.2	chr5	-	4110	13	NNC	ENSMUSG00000037224.16	novel	3983	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.8844945781705	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGGCGTCTTCTAT	NA	False	NA	-2	True	CATAAA	-18	NA	34445776	34352236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34353445_34353920_34354025_34354825_34354952_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.3	chr5	-	4144	13	FSM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	-161	0	-38	0	multi-exon	FALSE	canonical	2	8	junction_2	9.95685135416256	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGGCGTCTTCTAT	NA	False	NA	-2	True	CATAAA	-18	NA	34445831	34352236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.5	chr5	-	7125	9	Fusion	ENSMUSG00000037224.16_ENSMUSG00000086291.2	novel	712	4	NA	NA	-96	2	intron_retention	FALSE	canonical	2	11	junction_3	7.31009575860672	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTTTGATTATTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	34445889	34369151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_34371410_34371553_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.6	chr5	-	4716	9	Fusion	ENSMUSG00000037224.16_ENSMUSG00000086291.2	novel	712	4	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_1	10.9201648339208	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTTTTGATTATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	34445833	34369153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_34371410_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25794.7	chr5	-	4798	10	Fusion	ENSMUSG00000037224.16_ENSMUSG00000086291.2	novel	712	4	NA	NA	11	0	intron_retention	FALSE	canonical	2	2	junction_2	9.93062354289081	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTTTTGATTATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	34445770	34369153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_34371410_34371553_34371699_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ES.25795.1	chr5	+	136	1	Intergenic	novelGene_21480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAACAAAAAACAAAAC	8146	False	NA	NA	False	NA	NA	NA	34470335	34470471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34470300_34470500
ES.25796.1	chr5	+	148	1	Intergenic	novelGene_21484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	34489839	34489987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34489800_34490000
ES.25797.1	chr5	-	4151	3	Intergenic	novelGene_21481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCCTGTTGCAGCGTC	7274	False	NA	NA	False	NA	NA	NA	34493559	34488015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34488947_34489147_34489287_34490478
ES.25797.2	chr5	-	3716	2	Intergenic	novelGene_21482	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTCAA	7288	False	NA	NA	False	NA	NA	NA	34493545	34488960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34489287_34490155
ES.25797.3	chr5	-	3699	2	Intergenic	novelGene_21483	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTCAA	7268	False	NA	NA	False	NA	NA	NA	34493565	34488960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34489050_34489955
ES.25797.4	chr5	-	3213	1	Intergenic	novelGene_21485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTCATTTGTTCTTCT	7285	False	NA	NA	False	NA	NA	NA	34493548	34490335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34490300_34493500
ES.25797.5	chr5	-	3037	2	Intergenic	novelGene_21486	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	7314	False	NA	NA	False	NA	NA	NA	34493519	34490381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34491568_34491668
ES.25798.1	chr5	+	2839	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1051.07892979865	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493596	34510781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493641_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.10	chr5	+	5862	5	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2071	junction_1	100.245635815231	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493733	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34507416_34508133_34508183_34508574
ES.25798.100	chr5	+	3255	15	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	10	378	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.174375787011	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTGTCTATGTCTTGT	1453	False	NA	NA	False	AATAAA	-21	NA	34527286	34616815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341
ES.25798.101	chr5	+	6347	19	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	25.7816687676427	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCCTCTTTTCATCTG	1459	False	NA	NA	False	NA	NA	NA	34527292	34635033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600931_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069
ES.25798.104	chr5	+	5522	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.4387955275008	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGGAGACCCAGTCTG	1461	False	NA	7	True	ATTAAA	-38	NA	34527294	34643791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578302_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597942_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.105	chr5	+	5241	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	18	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9369287505993	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGGAATACATTAGTA	1461	False	NA	-12	True	ATTAAA	-19	NA	34527294	34643772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600931_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.106	chr5	+	5276	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7436537036046	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1463	False	NA	16	True	AATACA	-15	NA	34527296	34643800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.107	chr5	+	3323	13	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	23	-9	intron_retention	FALSE	canonical	0	0	junction_11	28.8042965545073	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGGAGACCCAGTCTG	1466	False	NA	7	True	ATTAAA	-38	NA	34527299	34643791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34527772_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34601103_34602005_34602258_34633069_34633152_34642997
ES.25798.11	chr5	+	2924	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1029.90511968606	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTATCTTTCATTTATT	NA	False	NA	21	True	AATAAA	-11	NA	34493733	34510776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504136_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.110	chr5	+	5503	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	21.8766427954565	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	1469	False	NA	15	True	AATACA	-14	NA	34527302	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600931_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.112	chr5	+	5181	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	92	-1129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	22.9365973936851	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAGTGTCTTAAATGT	1535	False	NA	NA	False	CATAAA	-21	NA	34527368	34633904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34633367
ES.25798.113	chr5	+	5115	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	289	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.0670219144128	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCACACCATCAAGTCTG	1732	False	NA	16	True	AAGAAA	-10	NA	34527565	34643659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578302_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.114	chr5	+	4924	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	359	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	25.5999480608891	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGACCCAGTCTGGTTGC	1802	False	NA	12	True	ATTAAA	-43	NA	34527635	34643796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600931_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.115	chr5	+	177	1	Intergenic	novelGene_21493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTAATGTATAG	1111	False	NA	NA	False	NA	NA	NA	34531760	34531937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34531800_34531900
ES.25798.116	chr5	+	4245	18	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-15671	7537	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	20.667913047954	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTGATTTGTGGTT	8555	False	NA	NA	False	TATAAA	-16	NA	34568009	34623974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600931_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ES.25798.117	chr5	+	4240	16	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	4794	-708	-88	-1	3prime_fragment	FALSE	canonical	3	56	junction_12	11.8088479069251	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	3492	False	NA	15	True	AATACA	-14	NA	34588474	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.118	chr5	+	3446	11	NNC	ENSMUSG00000037210.17	novel	3696	17	NA	NA	-126	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.70993918713	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	NA	False	NA	15	True	AATACA	-14	NA	34600939	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619140_34619226_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.119	chr5	+	3439	11	NNC	ENSMUSG00000037210.17	novel	3696	17	NA	NA	-103	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.6614022286654	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCAGTCTGGTTGCTT	NA	False	NA	14	True	ATTAAA	-45	NA	34600962	34643798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34639877_34639980_34642997
ES.25798.12	chr5	+	2939	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTATTCAGTTAT	NA	False	NA	28	True	AATAAA	-18	NA	34493733	34510783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507251_34507416_34508133_34508183_34508574
ES.25798.120	chr5	+	4230	6	NIC	ENSMUSG00000037210.17	novel	3696	17	NA	NA	-9839	-1128	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.45536520214	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTGTCTTAAATGTG	NA	False	NA	NA	False	CATAAA	-22	NA	34613633	34633905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34615448_34616341_34616633_34619427_34619612_34621317_34621549_34622917_34623792_34633069
ES.25798.121	chr5	+	3651	7	NIC	ENSMUSG00000037210.17	novel	3696	17	NA	NA	-8223	-1	intron_retention	FALSE	canonical	3	56	junction_3	15.1042672410445	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	NA	False	NA	15	True	AATACA	-14	NA	34615249	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34615448_34616341_34616633_34618438_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.122	chr5	+	5165	3	NIC	ENSMUSG00000037210.17	novel	3696	17	NA	NA	-3962	-1	intron_retention	FALSE	canonical	3	85	junction_2	5.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	NA	False	NA	15	True	AATACA	-14	NA	34619510	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34623792_34633069_34633152_34642997
ES.25798.123	chr5	+	1840	4	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	37234	-156	-2558	156	3prime_fragment	FALSE	canonical	3	70	junction_1	10.6562449087639	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGTTGTTAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	34620914	34643247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.124	chr5	+	6320	2	FSM	ENSMUSG00000037210.17	ENSMUST00000181379.2	2283	2	-1295	-2742	-1295	2742	multi-exon	FALSE	canonical	3	96	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAATGTTCACAGATAC	NA	False	NA	NA	False	AAGAAA	-14	NA	34622177	34637775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34623792_34633069
ES.25798.125	chr5	+	5670	1	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	8628	2737	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGGGAAATGTTCACA	NA	False	NA	NA	False	AAGAAA	-9	NA	34632100	34637770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34632100_34637800
ES.25798.126	chr5	+	3849	1	Genic_Genomic	ENSMUSG00000037210.17	novel	NA	NA	NA	NA	11364	3652	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCCTTTGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	34634836	34638685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_34634800_34638700
ES.25798.127	chr5	+	177	1	Intergenic	novelGene_21497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAGAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	34638351	34638528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34638400_34638500
ES.25798.128	chr5	+	1647	1	FSM	ENSMUSG00000106678.2	ENSMUST00000200867.2	2409	1	38	724	38	-724	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAAGCTTTGTAAGT	NA	False	NA	NA	False	CATAAA	-14	NA	34644695	34646342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34644700_34646300
ES.25798.15	chr5	+	646	5	NNC	ENSMUSG00000029110.14	novel	1205	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	917.122401863568	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTCCTCGAAGCACCAA	NA	False	NA	NA	False	NA	NA	NA	34493734	34507371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253
ES.25798.16	chr5	+	2782	6	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1079.41491559085	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTATCTTTCATTTAT	NA	False	NA	20	True	AATAAA	-10	NA	34493734	34510775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.19	chr5	+	2553	5	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1156.32399763215	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493743	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34506046_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.2	chr5	+	3032	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-16	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTCAGTTATTCTTT	NA	False	NA	33	True	AATAAA	-23	NA	34493655	34510788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.20	chr5	+	922	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-9	960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	981.947667761486	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGATGTAAACTGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	34493751	34508831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.21	chr5	+	4446	6	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	317	junction_4	748.439549997192	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493751	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506904_34507255_34508183_34508574
ES.25798.22	chr5	+	5200	6	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	5	junction_3	1051.12644339299	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493753	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34505425_34506007_34507416_34508133_34508183_34508574
ES.25798.23	chr5	+	6895	3	FSM	ENSMUSG00000029110.14	ENSMUST00000181999.8	586	3	-7	-6302	-7	0	multi-exon	FALSE	canonical	3	314	junction_1	973.5	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493753	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34493829_34499865_34500024_34504118
ES.25798.24	chr5	+	1683	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-7	-1231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGAGTGTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	34493753	34509537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.27	chr5	+	3642	6	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	873.711302433475	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493753	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34508183_34508574
ES.25798.28	chr5	+	4689	6	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-7	1	intron_retention	FALSE	non_canonical	0	0	junction_3	900.176560459113	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493753	34510781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.30	chr5	+	2917	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34493754	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507246_34507416_34508133_34508183_34508574
ES.25798.31	chr5	+	3724	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	317	junction_4	708.301175740628	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34493754	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506904_34507255_34507416_34508133_34508183_34508574
ES.25798.32	chr5	+	4012	6	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-6	2	intron_retention	FALSE	canonical	3	314	junction_1	771.206690842345	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACTAAGTATCTTTCA	NA	False	NA	15	True	AATAAA	-5	NA	34493754	34510770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34507416_34508133_34508183_34508574
ES.25798.33	chr5	+	2932	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1029.90511968606	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34493754	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504108_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.34	chr5	+	3096	8	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1109.08469340392	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493754	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34505251_34505425_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.35	chr5	+	3316	6	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	868.727114806485	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493755	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133
ES.25798.36	chr5	+	1789	5	NNC	ENSMUSG00000029110.14	novel	1205	6	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	917.122401863568	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34493755	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34509495
ES.25798.37	chr5	+	2907	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1051.31325282028	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACTAAGTATCTTTCA	NA	False	NA	15	True	AATAAA	-5	NA	34493755	34510770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493879_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.39	chr5	+	2848	7	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	314	junction_1	732.601623591491	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493758	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ES.25798.4	chr5	+	2911	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	981.947667761486	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCATTTATTCAGTTA	NA	False	NA	27	True	AATAAA	-17	NA	34493713	34510782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.41	chr5	+	6554	4	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	2071	junction_1	109.848380355227	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTTTCATTTATTCAG	NA	False	NA	24	True	AATAAA	-14	NA	34493758	34510779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34508183_34508574
ES.25798.43	chr5	+	3270	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_4	824.87387924862	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493758	34510781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34507416_34508133_34508183_34508574
ES.25798.44	chr5	+	5185	4	ISM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	126	3	-2	0	intron_retention	FALSE	canonical	3	1984	junction_3	115.661383164631	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493758	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007
ES.25798.46	chr5	+	2669	6	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	871.417833189108	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAACAATTTGAACTA	NA	False	NA	4	True	ATTAAA	-6	NA	34493760	34510759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493829_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ES.25798.47	chr5	+	1919	4	NNC	ENSMUSG00000029110.14	novel	586	3	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1000.08477418445	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493761	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504173_34509138
ES.25798.48	chr5	+	2943	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1058.76113400941	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCATTTATTCAGTTA	NA	False	NA	27	True	AATAAA	-17	NA	34493762	34510782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34505983_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.49	chr5	+	4403	5	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	314	junction_1	816.77823642651	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34493762	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34507416_34508133
ES.25798.50	chr5	+	2788	6	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1097.06470182939	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493762	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.51	chr5	+	5459	24	Fusion	ENSMUSG00000029110.14_ENSMUSG00000037210.17	novel	3696	17	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_4	689.368361066909	1818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	NA	False	NA	15	True	AATACA	-14	NA	34493762	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.52	chr5	+	6942	3	FSM	ENSMUSG00000029110.14	ENSMUST00000182772.8	928	3	-4	-6010	1	0	multi-exon	FALSE	canonical	3	2071	junction_1	95	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493763	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34493886_34499865_34500024_34504118
ES.25798.53	chr5	+	2939	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	2	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	1019.7031703175	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493764	34510781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508551
ES.25798.54	chr5	+	4448	5	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	2	intron_retention	FALSE	canonical	3	1984	junction_3	129.256527881574	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACTAAGTATCTTTCA	NA	False	NA	15	True	AATAAA	-5	NA	34493767	34510770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34507416_34508133
ES.25798.55	chr5	+	2720	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	1	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAAAAAGATGTGTTCT	NA	False	NA	NA	False	ATTAAA	-1	NA	34493768	34510589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.57	chr5	+	4435	1	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	8	-1762	mono-exon	FALSE	NA	NA	NA	NA	NA	1462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCGTTGTGTACACATA	NA	False	NA	NA	False	NA	NA	NA	34493775	34498210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493800_34498200
ES.25798.58	chr5	+	2915	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1050.37644045679	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAAGTATCTTTCATTT	NA	False	NA	18	True	AATAAA	-8	NA	34493777	34510773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499845_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.59	chr5	+	2855	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1100.50851882209	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493778	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34505994_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.60	chr5	+	1444	7	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	11	-1388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	981.947667761486	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGAAGCTGTAGCACT	NA	False	NA	NA	False	AATAAA	-26	NA	34493778	34509380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.63	chr5	+	4000	5	NNC	ENSMUSG00000029110.14	novel	1205	6	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	917.122401863568	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493787	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253
ES.25798.64	chr5	+	5750	5	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	314	junction_1	858.299772806681	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493788	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493829_34499865_34500024_34504118_34507416_34508133_34508183_34508574
ES.25798.65	chr5	+	6106	4	NIC	ENSMUSG00000029110.14	novel	1205	6	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_3	1024.00423176209	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493791	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34506088_34506893
ES.25798.66	chr5	+	5834	5	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	12	0	intron_retention	FALSE	canonical	1	317	junction_3	823.525158996372	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493801	34510780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34506904_34507255_34507416_34508133
ES.25798.67	chr5	+	2942	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1025.44387408034	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493802	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507483_34508133_34508183_34508574
ES.25798.68	chr5	+	6058	5	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	14	-2	intron_retention	FALSE	canonical	1	2	junction_1	993.351146372721	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493803	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34494154_34499865_34500024_34504118_34507416_34508133_34508183_34508574
ES.25798.69	chr5	+	910	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	14	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAATGTCTGATGTA	NA	False	NA	NA	False	AAAAAG	-7	NA	34493803	34508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507251_34507416_34508133_34508183_34508574
ES.25798.7	chr5	+	1009	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-9	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAATGTCTGATGTA	NA	False	NA	NA	False	AAAAAG	-7	NA	34493714	34508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.70	chr5	+	2999	8	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1102.25851629039	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAACTAAGTATCTTT	NA	False	NA	13	True	AATAAA	-3	NA	34493803	34510768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34495646_34495782_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.71	chr5	+	5675	7	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	16	608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	824.87387924862	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAACTGTATCA	NA	False	NA	NA	False	NA	NA	NA	34493805	34513581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.73	chr5	+	2988	7	NNC	ENSMUSG00000029110.14	novel	619	6	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1050.84468669521	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493957	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34494154_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.74	chr5	+	2927	7	NNC	ENSMUSG00000029110.14	novel	2944	8	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1050.37644045679	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34494304	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34494442_34499865_34500024_34504118_34504246_34506007_34506100_34507255_34507416_34508133_34508183_34508574
ES.25798.75	chr5	+	2993	8	NNC	ENSMUSG00000029110.14	novel	2944	8	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1102.25851629039	1608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTTTCATTTATTC	NA	False	NA	22	True	AATAAA	-12	NA	34494305	34510777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34494442_34495873_34495940_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.76	chr5	+	2731	7	NNC	ENSMUSG00000029110.14	novel	2944	8	NA	NA	33	-184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1050.37644045679	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATTGAGAAAAAGATGT	NA	False	NA	NA	False	CATAAA	-23	NA	34494308	34510584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34494442_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133_34508183_34508574
ES.25798.78	chr5	+	177	1	Intergenic	novelGene_21487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34500510	34500687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34500500_34500700
ES.25798.79	chr5	+	1446	1	Intergenic	novelGene_21489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAATGTGTACA	NA	False	NA	NA	False	NA	NA	NA	34501597	34503043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34501600_34503000
ES.25798.8	chr5	+	3279	6	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	1001.66733000533	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34493733	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506100_34507253_34507416_34508133
ES.25798.80	chr5	+	7756	2	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	-5829	-2	intron_retention	FALSE	canonical	3	2331	junction_1	0	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCTTTCATTTATTCA	NA	False	NA	23	True	AATAAA	-13	NA	34502630	34510778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34508183_34508574
ES.25798.81	chr5	+	5648	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-108	1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.252536045463	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTCTGGTTGCTTTCT	1335	False	NA	17	True	AATACA	-16	NA	34527168	34643801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.82	chr5	+	11302	22	Fusion	ENSMUSG00000106678.2_ENSMUSG00000037210.17	novel	5536	21	NA	NA	-102	2440	multi-exon	TRUE	non_canonical	0	0	junction_21	22.7007546799341	208	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTCATGATAAATCT	1341	False	NA	NA	False	NA	NA	NA	34527174	34649506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997_34647832_34647876
ES.25798.83	chr5	+	5389	20	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-97	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	21.9758114318594	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	1346	False	NA	15	True	AATACA	-14	NA	34527179	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.85	chr5	+	5584	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-95	-1129	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.4131799670565	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAGTGTCTTAAATGT	1348	False	NA	NA	False	CATAAA	-21	NA	34527181	34633904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069
ES.25798.87	chr5	+	5174	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-18	-140	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	22.0603553864935	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACACCATCAAGTCTGT	1425	False	NA	17	True	AAGAAA	-11	NA	34527258	34643660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.88	chr5	+	5995	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-18	438	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.252536045463	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTGGCTTGGTTAGTA	1425	False	NA	NA	False	AGTAAA	-19	NA	34527258	34644238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.89	chr5	+	5512	22	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-15	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	26.4039782613759	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCACACCATCAAGTCTG	1428	False	NA	16	True	AAGAAA	-10	NA	34527261	34643659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34639877_34639980_34642997
ES.25798.9	chr5	+	4101	6	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	1984	junction_3	135.88141889162	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTCATTTATTCAGTT	NA	False	NA	26	True	AATAAA	-16	NA	34493733	34510781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34507416_34508133_34508183_34508574
ES.25798.91	chr5	+	4594	18	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-3	7537	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.5657019546091	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTGATTTGTGGTT	1440	False	NA	NA	False	TATAAA	-16	NA	34527273	34623974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34527772_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917
ES.25798.93	chr5	+	5409	21	FSM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	-3	130	-3	-130	multi-exon	FALSE	canonical	3	34	junction_1	17.141980632354	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCTGTTCTAGAGCGT	1440	False	NA	27	True	AAGAAA	-21	NA	34527273	34643670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.94	chr5	+	5527	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.8318374324234	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCAGTCTGGTTGCTT	1441	False	NA	14	True	ATTAAA	-45	NA	34527274	34643798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578129_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618700_34619415_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.95	chr5	+	7365	19	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	3	-1	intron_retention	FALSE	canonical	3	33	junction_2	17.6062033119503	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCAGTCTGGTTGCTTT	1446	False	NA	15	True	AATACA	-14	NA	34527279	34643799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34621549_34622917_34623792_34633069_34633152_34642997
ES.25798.96	chr5	+	4399	10	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	3	43467	3	-639	5prime_fragment	FALSE	canonical	3	34	junction_1	18.043842354487	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGCATTTTTACTTCAG	1446	False	NA	NA	False	AATAAA	-17	NA	34527279	34600333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691
ES.25798.98	chr5	+	5482	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	4	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	27.1571353423	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGATGGAATACATTAG	1447	False	NA	-14	True	ATTAAA	-17	NA	34527280	34643770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616340_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34643018
ES.25798.99	chr5	+	5239	19	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	5	-1131	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	22.3245560419269	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGCAGTGTCTTAAAT	1448	False	NA	NA	False	CATAAA	-19	NA	34527281	34633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069
ES.25799.1	chr5	-	171	1	Intergenic	novelGene_21488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	3363	False	NA	NA	False	NA	NA	NA	34501099	34500928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34500900_34501100
ES.258.1	chr1	+	179	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	36019589	36019768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36019600_36019800
ES.2580.1	chr10	+	145	1	Intergenic	novelGene_1956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTAAAGCC	5402	False	NA	NA	False	NA	NA	NA	34290310	34290455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_34290300_34290500
ES.25800.1	chr5	-	3448	1	Intergenic	novelGene_21491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAGCTGAGCACCAGA	7699	False	NA	NA	False	NA	NA	NA	34518463	34515015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34515000_34518500
ES.25800.2	chr5	-	2991	2	Intergenic	novelGene_21490	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAGCTGAGCACCAGA	7700	False	NA	NA	False	NA	NA	NA	34518462	34515015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34515687_34516142
ES.25801.1	chr5	-	254	1	Intergenic	novelGene_21492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTCAATGTTTTGTT	4215	False	NA	NA	False	NA	NA	NA	34521947	34521693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34521700_34521900
ES.25802.1	chr5	-	127	1	Intergenic	novelGene_21494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34535546	34535419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34535400_34535500
ES.25803.1	chr5	-	158	1	Intergenic	novelGene_21495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34544255	34544097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34544100_34544300
ES.25804.1	chr5	-	1958	1	Intergenic	novelGene_21496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGGGGCTGGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	34548267	34546309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34546300_34548300
ES.25805.1	chr5	-	2553	1	Antisense	novelGene_ENSMUSG00000037210.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATGAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34568283	34565730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_34565700_34568300
ES.25806.1	chr5	-	5754	1	Antisense	novelGene_ENSMUSG00000037210.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTCTCAAGGAAGATT	NA	False	NA	NA	False	NA	NA	NA	34602146	34596392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_34596400_34602100
ES.25807.1	chr5	-	177	1	Antisense	novelGene_ENSMUSG00000037210.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAATTTTATGGT	2849	False	NA	NA	False	NA	NA	NA	34634360	34634183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_34634200_34634400
ES.25808.1	chr5	+	382	1	Intergenic	novelGene_21498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTACCCCCAATCTAACC	1067	False	NA	NA	False	NA	NA	NA	34661453	34661835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34661500_34661800
ES.25809.1	chr5	+	158	1	Intergenic	novelGene_21499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	8198	False	NA	NA	False	NA	NA	NA	34668584	34668742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34668600_34668700
ES.2581.10	chr10	-	2963	14	NNC	ENSMUSG00000039480.15	novel	2743	12	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.4798417986882	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTTGTATTATTGA	NA	False	NA	-4	True	AATAAA	-14	NA	34294508	34179607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34272188_34272291_34273076_34273238_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.11	chr10	-	3867	11	NNC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	9342	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.8935730202811	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTTGTATTATTGA	NA	False	NA	-4	True	AATAAA	-14	NA	34285122	34179607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34283708
ES.2581.12	chr10	-	2775	13	NNC	ENSMUSG00000039480.15	novel	2743	12	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.6856382190129	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATAGATGTTTGTATTA	NA	False	NA	-8	True	AATAAA	-10	NA	34294535	34179611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34283708_34283761_34287363_34287456_34294356
ES.2581.13	chr10	-	2477	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	66	200	-5	-200	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTTACTATCAGTATA	NA	False	NA	NA	False	ATTAAA	-16	NA	34294482	34179804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.15	chr10	-	1613	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-7	1137	-7	-481	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTCAGTCTGTCTTT	NA	False	NA	NA	False	AATGAA	-15	NA	34294555	34180741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.16	chr10	-	177	1	Intergenic	novelGene_1954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGACACTGTGAGAG	3656	False	NA	NA	False	NA	NA	NA	34229938	34229761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_34229800_34229900
ES.2581.17	chr10	-	3065	6	NNC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	10	20635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.8426906721923	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATGACCTCTTCATTC	NA	False	NA	NA	False	NA	NA	NA	34294514	34233088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34235615_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.18	chr10	-	1410	7	FSM	ENSMUSG00000039480.15	ENSMUST00000099973.4	761	7	-14	-635	-14	635	multi-exon	FALSE	canonical	2	4	junction_1	35.3714417134627	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGAGTTTTTGAAATG	NA	False	NA	NA	False	ATTAAA	-22	NA	34294491	34272428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34273238_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.2	chr10	-	5598	11	NNC	ENSMUSG00000039480.15	novel	2743	12	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.372870960667	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGTATTATTGAATAT	NA	False	NA	0	True	AATAAA	-18	NA	34294511	34179603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34189494_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34283530_34283603_34287363_34287456_34294356
ES.2581.3	chr10	-	2774	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	-32	1	-32	-1	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGTATTATTGAAT	NA	False	NA	-2	True	AATAAA	-16	NA	34294580	34179605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.4	chr10	-	2678	12	NNC	ENSMUSG00000039480.15	novel	2727	12	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	31.0448888541567	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGTATTATTGAAT	NA	False	NA	-2	True	AATAAA	-16	NA	34294514	34179605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279673_34279784_34283530_34283603_34287363_34287456_34294356
ES.2581.5	chr10	-	2608	11	NIC	ENSMUSG00000039480.15	novel	2743	12	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	27.8569560433296	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGTATTATTGAAT	NA	False	NA	-2	True	AATAAA	-16	NA	34294551	34179605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34283530_34283603_34287363_34287456_34294356
ES.2581.7	chr10	-	3591	11	NNC	ENSMUSG00000039480.15	novel	1978	11	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	36.2469309045607	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	NA	False	NA	-3	True	AATAAA	-15	NA	34294559	34179606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34293432
ES.2581.8	chr10	-	4531	2	NNC	ENSMUSG00000039480.15	novel	1978	11	NA	NA	4699	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	1510	False	NA	-3	True	AATAAA	-15	NA	34184980	34179606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34182007_34182849
ES.2581.9	chr10	-	2952	12	NNC	ENSMUSG00000039480.15	novel	2743	12	NA	NA	629	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	28.015639079947	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTTGTATTATTGAA	NA	False	NA	-3	True	AATAAA	-15	NA	34293835	34179606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34293432
ES.25810.1	chr5	-	3813	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-6	1685	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTATGTGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	34671288	34651745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.10	chr5	-	1702	6	NNC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	97	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.9476659725921	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGCTGGAATGTGT	NA	False	NA	-4	True	AATAAA	-25	NA	34670907	34653424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670825
ES.25810.13	chr5	-	4553	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-23	4	intron_retention	FALSE	canonical	3	112	junction_2	6.72681202353685	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCTGGGCTGGAATGT	NA	False	NA	-6	True	AATAAA	-23	NA	34671358	34653426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34661172_34670962
ES.25810.14	chr5	-	2053	7	FSM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	-27	-4	1	4	multi-exon	FALSE	canonical	1	1	junction_5	56.3661147223125	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCTGGGCTGGAATGT	NA	False	NA	-6	True	AATAAA	-23	NA	34671334	34653426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34658801_34658865_34660880_34661172_34670962
ES.25810.15	chr5	-	4583	5	NNC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	53.6027051556169	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGAGAGCTGGGCTGG	NA	False	NA	-11	True	AATAAA	-18	NA	34671335	34653431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34654295_34656523_34656758_34656887_34657081_34658251_34661172_34670962
ES.25810.16	chr5	-	4692	4	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	117	junction_3	5.31245915016974	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGAGAGCTGGGCTGG	NA	False	NA	-11	True	AATAAA	-18	NA	34671314	34653431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34657081_34658251_34661172_34670962
ES.25810.17	chr5	-	1992	6	NNC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.1819892300016	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGAGAGCTGGGCTG	NA	False	NA	-12	True	AATAAA	-17	NA	34671284	34653432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34654295_34656523_34656758_34656887_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.19	chr5	-	6817	1	NIC	ENSMUSG00000059866.14	novel	2022	7	NA	NA	-1288	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCTGAGAGCTGGGCT	329	False	NA	-13	True	AATAAA	-16	NA	34660250	34653433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34653400_34660200
ES.25810.2	chr5	-	3674	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-4	-1683	-4	1683	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTATGTATGTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	34671339	34651747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.3	chr5	-	3542	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	10	1683	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	50.9558632543891	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTATGTATGTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	34671297	34651747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34656644_34656831_34657081_34660880_34661172_34670962
ES.25810.5	chr5	-	2855	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	0	-868	0	868	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACAACAAAAAATAC	NA	False	NA	NA	False	AATAAA	-14	NA	34671335	34652562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.6	chr5	-	5911	3	NIC	ENSMUSG00000059866.14	novel	1642	5	NA	NA	-18	8	intron_retention	FALSE	canonical	3	117	junction_2	3	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTGGAATGTGTGC	NA	False	NA	-2	True	AATAAA	-27	NA	34671353	34653422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34661172_34670962
ES.25810.7	chr5	-	1952	6	NNC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	9	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5115521024168	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTGGAATGTGTGC	NA	False	NA	-2	True	AATAAA	-27	NA	34671298	34653422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34654295_34656529_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.8	chr5	-	2010	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	-17	-6	-17	6	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGCTGGAATGTGT	NA	False	NA	-4	True	AATAAA	-25	NA	34671352	34653424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ES.25810.9	chr5	-	2177	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	4	6	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGCTGGAATGTGT	NA	False	NA	-4	True	AATAAA	-25	NA	34671331	34653424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
ES.25811.1	chr5	+	2251	13	FSM	ENSMUSG00000054520.16	ENSMUST00000067638.14	2885	13	-74	708	-66	-692	multi-exon	FALSE	canonical	0	0	junction_5	1.59861050777091	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCAGGGTTTGATTGG	NA	False	NA	NA	False	AATAAA	-21	NA	34683115	34720277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34683246_34708904_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34718946_34719007_34719702
ES.25811.2	chr5	+	2834	12	NIC	ENSMUSG00000054520.16	novel	2885	13	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1.82725011293107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTTATGCATATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	34683164	34720969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34683246_34708904_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34719702
ES.25811.3	chr5	+	2873	13	FSM	ENSMUSG00000054520.16	ENSMUST00000067638.14	2885	13	-4	16	4	0	multi-exon	FALSE	canonical	0	0	junction_5	1.59861050777091	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTTATGCATATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	34683185	34720969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34683246_34708904_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34718946_34719007_34719702
ES.25811.5	chr5	+	177	1	Intergenic	novelGene_21500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	34719430	34719607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34719400_34719600
ES.25812.1	chr5	+	5700	14	NNC	ENSMUSG00000029106.15	novel	2337	15	NA	NA	-190	0	intron_retention	FALSE	canonical	0	0	junction_1	141.533068459126	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34730817	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34730845_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.10	chr5	+	13528	12	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-24	0	intron_retention	FALSE	canonical	3	496	junction_4	23.2499888918484	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731084	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34776796_34777388_34782780_34785758
ES.25812.11	chr5	+	6299	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-23	1	intron_retention	FALSE	canonical	1	1	junction_4	228.168884819995	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731085	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34755512_34755792_34758667_34758883_34761222_34761408_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.12	chr5	+	3836	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	193.321907708361	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCTTGTCTAAGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	34731086	34789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758756_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.14	chr5	+	4148	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	174.643942542153	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731097	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34755512_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.16	chr5	+	789	1	FSM	ENSMUSG00000099082.3	ENSMUST00000184791.3	63	1	-395	-331	-395	331	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAACTGCTGTTGTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34731099	34731888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34731100_34731900
ES.25812.17	chr5	+	3865	15	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	139.346799791904	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGTTGGGGGCAACTT	NA	False	NA	21	True	AATAAA	-22	NA	34731099	34789647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773914_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.19	chr5	+	3992	17	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	204.145322013511	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAAGGTTGGGGGCA	NA	False	NA	17	True	AATAAA	-18	NA	34731100	34789643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ES.25812.2	chr5	+	4295	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	38	276	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	159.558752676108	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTTGTTTGTTTTTTG	NA	False	NA	NA	False	ACTAAA	-15	NA	34731045	34789928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.20	chr5	+	4581	4	ISM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	95	22433	-6	3982	5prime_fragment	FALSE	canonical	3	508	junction_3	17.6131264181639	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTGTTTCATTATCCT	NA	False	NA	NA	False	NA	NA	NA	34731102	34767219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171
ES.25812.21	chr5	+	3558	13	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	149.337704549119	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34731102	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.22	chr5	+	4227	17	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	209.63029212163	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTTGTCTAAGGTTGG	NA	False	NA	12	True	AATAAA	-13	NA	34731102	34789638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34755512_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.23	chr5	+	5203	15	ISM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	101	0	0	0	intron_retention	FALSE	canonical	3	43	junction_14	126.575701314531	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731108	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479
ES.25812.24	chr5	+	5903	15	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	0	5	intron_retention	FALSE	canonical	3	50	junction_12	164.17922014229	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAAGGTTGGGGGCA	NA	False	NA	17	True	AATAAA	-18	NA	34731108	34789643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758
ES.25812.25	chr5	+	5811	14	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_12	142.342241128442	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34731109	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782633_34782780_34785758
ES.25812.26	chr5	+	3729	15	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.689713874872	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731109	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758756_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.28	chr5	+	5725	14	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_10	142.543629778859	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731116	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776772_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.29	chr5	+	3941	17	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	5	66176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	197.725780754559	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATCCCTCAAGTATACA	NA	False	NA	NA	False	NA	NA	NA	34731117	34855828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786482_34786517_34787813_34789654_34855782
ES.25812.3	chr5	+	3931	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	-170	0	39	0	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731046	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.31	chr5	+	4058	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	170.030114979671	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34731126	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34786031_34786479_34786517_34787813
ES.25812.32	chr5	+	3885	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	178.769000544153	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731126	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34774779_34774825_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.35	chr5	+	3904	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	170.030114979671	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731137	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786439_34786517_34787813
ES.25812.36	chr5	+	4198	16	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	204.539439283044	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731139	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34755512_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.38	chr5	+	4475	15	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	12	1	intron_retention	FALSE	canonical	3	61	junction_14	122.040307827758	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34731159	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34786517_34787813
ES.25812.39	chr5	+	4006	15	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	138.444658507968	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34731160	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34759074_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.4	chr5	+	5887	14	ISM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	39	0	39	0	intron_retention	FALSE	canonical	3	470	junction_10	26.6866542450135	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731046	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.40	chr5	+	2342	1	FSM	ENSMUSG00000107128.2	ENSMUST00000202995.2	469	1	-1263	-610	-1263	610	mono-exon	FALSE	NA	NA	NA	NA	NA	578	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCCAAAAAGGAATTAAGT	NA	False	NA	NA	False	NA	NA	NA	34731168	34733510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34731200_34733500
ES.25812.41	chr5	+	5931	15	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	23	2	intron_retention	FALSE	canonical	3	16	junction_10	199.711168992643	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731170	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758
ES.25812.43	chr5	+	3885	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	180.009925652263	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCTTGTCTAAGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	34731170	34789637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34762367_34762461_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.44	chr5	+	10896	13	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	23	3	intron_retention	FALSE	canonical	3	470	junction_10	27.7131887976345	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731170	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34782780_34785758
ES.25812.45	chr5	+	3961	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.777130031283	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34731171	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34737192_34737351_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.48	chr5	+	8277	13	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-26	3	intron_retention	FALSE	canonical	3	496	junction_4	22.4949068309547	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731180	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.49	chr5	+	4296	17	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.262088581641	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTCCTTGTCTAAGGT	NA	False	NA	9	True	AATAAA	-10	NA	34731182	34789635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34755007_34755233_34755512_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767521_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.5	chr5	+	4077	16	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	193.161647907193	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731068	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.50	chr5	+	3840	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	176.968873597088	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAAGGTTGGGGGCA	NA	False	NA	17	True	AATAAA	-18	NA	34731184	34789643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34755512_34755569_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.51	chr5	+	3964	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	178.341918796451	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731187	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34761222_34761408_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.52	chr5	+	3964	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	176.479901279312	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34731188	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34755613_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.53	chr5	+	5822	15	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-15	1	intron_retention	FALSE	canonical	0	0	junction_3	185.650112538922	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34731191	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34762367_34762461_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758
ES.25812.54	chr5	+	3905	16	FSM	ENSMUSG00000029106.15	ENSMUST00000001108.11	3898	16	-13	6	-13	5	multi-exon	FALSE	canonical	3	16	junction_10	196.706549628289	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTAAGGTTGGGGGCA	NA	False	NA	17	True	AATAAA	-18	NA	34731193	34789643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ES.25812.55	chr5	+	3520	14	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-13	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	144.590587071989	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731193	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.56	chr5	+	3688	14	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	142.005167003251	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34731196	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.57	chr5	+	4027	16	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.777130031283	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731196	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34750075_34750322_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.58	chr5	+	3905	17	NNC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-10	66176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	204.426704086697	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATCCCTCAAGTATACA	NA	False	NA	NA	False	NA	NA	NA	34731196	34855828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785760_34785858_34787813_34789642_34826174_34826266_34855782
ES.25812.59	chr5	+	4704	15	NNC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.689713874872	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTAAGGTTGGGGG	NA	False	NA	15	True	AATAAA	-16	NA	34731199	34789641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34731258_34758667_34759820_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.6	chr5	+	3942	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	63	2	-38	1	multi-exon	FALSE	canonical	3	43	junction_14	162.471932618803	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34731070	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ES.25812.60	chr5	+	4524	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	50	junction_12	187.063791852465	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731199	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34786517_34787813
ES.25812.63	chr5	+	191	1	Intergenic	novelGene_21501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTACTTTTT	NA	False	NA	NA	False	NA	NA	NA	34738578	34738769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34738600_34738800
ES.25812.64	chr5	+	3786	16	NNC	ENSMUSG00000029106.15	novel	4547	18	NA	NA	173	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	231.193098705149	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTTGGGGGCAACTTT	NA	False	NA	22	True	AATAAA	-23	NA	34758858	34789648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34758883_34761222_34761408_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776785_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.65	chr5	+	5163	2	ISM	ENSMUSG00000029106.15	ENSMUST00000052836.14	2337	15	2365	20972	2365	3951	internal_fragment	FALSE	canonical	3	508	junction_1	0	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34761050	34767188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34762197_34763171
ES.25812.66	chr5	+	4100	3	NIC	ENSMUSG00000029106.15	novel	2337	15	NA	NA	4576	1	intron_retention	FALSE	canonical	0	0	junction_1	264.5	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	1441	False	NA	13	True	AATAAA	-14	NA	34763261	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34763324_34782622_34782780_34785758
ES.25812.67	chr5	+	2959	9	NNC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	-960	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	174.235293497041	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	8810	False	NA	23	True	AATAAA	-24	NA	34770630	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34770776_34770862_34770962_34771527_34771705_34773906_34774161_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25812.68	chr5	+	8849	4	NIC	ENSMUSG00000029106.15	novel	2370	7	NA	NA	1153	2	intron_retention	FALSE	canonical	3	389	junction_3	65.0743164901996	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTCTAAGGTTGGGG	NA	False	NA	14	True	AATAAA	-15	NA	34775263	34789640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34776796_34777388_34782780_34785758_34785858_34787813
ES.25812.69	chr5	+	3289	6	ISM	ENSMUSG00000029106.15	ENSMUST00000052836.14	2337	15	17038	-1490	-974	1	3prime_fragment	FALSE	canonical	3	6	junction_4	240.949289270585	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	False	NA	24	True	AATAAA	-25	NA	34775723	34789650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786482_34786517_34787813
ES.25812.7	chr5	+	3989	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	159.558752676108	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731075	34789652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
ES.25812.70	chr5	+	4139	1	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	8186	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	722	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGTCTAAGGTTGGG	NA	False	NA	13	True	AATAAA	-14	NA	34785500	34789639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34785500_34789600
ES.25812.71	chr5	+	2705	2	Antisense	novelGene_ENSMUSG00000036693.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAAAAACCTCTAATGCA	NA	False	NA	NA	False	TATAAA	-15	NA	34797972	34801221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_34799643_34800186
ES.25812.72	chr5	+	3205	6	FSM	ENSMUSG00000052783.17	ENSMUST00000074651.11	3234	6	34	-5	34	5	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTACATGGTCATTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	34817756	34858431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34818349_34826453_34826547_34831877_34831991_34833453_34833529_34852090_34852198_34856206
ES.25812.73	chr5	+	182	1	Intergenic	novelGene_21504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGTTCAAACAAAA	842	False	NA	NA	False	NA	NA	NA	34821986	34822168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34822000_34822200
ES.25812.74	chr5	+	203	1	Intergenic	novelGene_21505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTATTTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	34838868	34839071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34838900_34839100
ES.25812.8	chr5	+	3992	15	NIC	ENSMUSG00000029106.15	novel	3898	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	135.779157427923	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	False	NA	23	True	AATAAA	-24	NA	34731075	34789649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ES.25813.1	chr5	-	206	1	Intergenic	novelGene_21502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAATGAAAAAGTA	NA	False	NA	NA	False	AAAACA	-30	NA	34739007	34738801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34738800_34739000
ES.25814.1	chr5	-	1063	1	Intergenic	novelGene_21503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34743359	34742296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_34742300_34743400
ES.25815.10	chr5	-	2496	9	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	5	1	intron_retention	FALSE	canonical	3	28	junction_8	123.263944444432	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794528	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792504_34792713_34792876_34792952_34793851_34793937_34794131_34794442
ES.25815.11	chr5	-	2059	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	174	junction_11	68.0427672998254	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794537	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.13	chr5	-	2169	10	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	1	1	intron_retention	TRUE	canonical	3	36	junction_9	114.17735824498	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794532	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ES.25815.16	chr5	-	1762	12	NNC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.715545918772	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794501	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34792198_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ES.25815.18	chr5	-	2074	12	NNC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	22	1	intron_retention	FALSE	canonical	1	1	junction_11	143.70136618915	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794511	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792876_34792952_34793087_34793364_34793469_34793753_34793851_34793937_34794131_34794266
ES.25815.21	chr5	-	3161	5	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	315	junction_4	36.1386219991853	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794468	34790989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791565_34791636_34791685_34791766_34791858_34791934_34793851_34793937
ES.25815.22	chr5	-	2798	6	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-17	0	intron_retention	FALSE	canonical	3	174	junction_5	95.6568868404152	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCCGTCTTACTAT	NA	False	NA	-5	True	AATAAA	-19	NA	34794501	34790990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791685_34791766_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.23	chr5	-	2233	9	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	28	junction_8	123.075942003301	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCCGTCTTACTAT	NA	False	NA	-5	True	AATAAA	-19	NA	34794475	34790990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792504_34792713_34793469_34793753_34793851_34793937_34794131_34794442
ES.25815.25	chr5	-	3074	5	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_4	145.102549943135	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCCGTCTTACTAT	NA	False	NA	-5	True	AATAAA	-19	NA	34794484	34790990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34792876_34792952_34793851_34793937_34794131_34794270
ES.25815.26	chr5	-	2704	8	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	36	junction_7	129.28421467165	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTTTCCGTCTTACTAT	NA	False	NA	-5	True	AATAAA	-19	NA	34794531	34790990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34793851_34793937_34794128_34794442
ES.25815.27	chr5	-	3421	2	ISM	ENSMUSG00000001082.13	ENSMUST00000137744.3	802	3	-96	-2380	-16	0	intron_retention	FALSE	canonical	3	315	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794500	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34793851_34793937
ES.25815.28	chr5	-	1894	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-32	0	intron_retention	FALSE	canonical	3	5	junction_5	121.545624532417	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794436	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792247_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.29	chr5	-	1581	13	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	135.4806259212	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794498	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793000_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ES.25815.3	chr5	-	1670	13	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	134.160429461646	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCGTCTTACTATTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	34794521	34790986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34791989_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
ES.25815.30	chr5	-	2544	10	NNC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	19	junction_7	129.392407280058	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794492	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792872_34792952_34793851_34793937_34794128_34794270
ES.25815.31	chr5	-	2297	10	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	28	junction_9	117.091607062353	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794485	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792876_34792952_34793469_34793753_34793851_34793937_34794131_34794442
ES.25815.32	chr5	-	2129	11	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	174	junction_10	71.0850898571564	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794534	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.35	chr5	-	2806	6	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	174	junction_5	84.8726104229156	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794467	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791565_34791636_34791685_34791766_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.36	chr5	-	2060	11	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-17	0	intron_retention	FALSE	canonical	3	28	junction_10	111.099099906345	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794501	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
ES.25815.37	chr5	-	2108	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	12	junction_7	125.867430258983	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794492	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792876_34792952_34793000_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.38	chr5	-	1796	13	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_6	116.855412797183	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794489	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792247_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.39	chr5	-	2539	9	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	69	junction_8	111.179753102802	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794467	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792876_34792952_34793469_34793753_34793851_34793937_34794131_34794270
ES.25815.4	chr5	-	1698	13	NIC	ENSMUSG00000001082.13	novel	1754	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_6	137.841973731597	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCGTCTTACTATTCT	NA	False	NA	-2	True	AATAAA	-22	NA	34794555	34790987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792247_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794442
ES.25815.40	chr5	-	2193	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	174	junction_10	71.3014025107501	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794465	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.41	chr5	-	1944	8	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	347	junction_5	36.4053147050745	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34793866	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792504_34792713_34792876_34792952_34793469_34793753
ES.25815.42	chr5	-	3245	4	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	21	0	intron_retention	FALSE	canonical	3	315	junction_3	60.7581727470104	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794512	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34793851_34793937
ES.25815.44	chr5	-	1702	13	NNC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	131.821849478757	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794476	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792737_34792957_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ES.25815.46	chr5	-	2131	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	22	0	intron_retention	FALSE	canonical	3	174	junction_11	68.0121525358666	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794511	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.50	chr5	-	1834	13	NNC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	131.834702900598	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794434	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792074_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ES.25815.51	chr5	-	1447	12	NIC	ENSMUSG00000001082.13	novel	1906	13	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	142.781749881326	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794104	34790992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34791989_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793000_34793364_34793469_34793753_34793851_34793937
ES.25815.52	chr5	-	3046	1	FSM	ENSMUSG00000001082.13	ENSMUST00000200717.2	414	1	-1195	-1437	111	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCCTTTCCGTCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	34794040	34790994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34791000_34794000
ES.25815.53	chr5	-	2775	7	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	4	-3	intron_retention	FALSE	canonical	3	174	junction_6	91.3061090812414	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGTGCCTTTCCGTCTT	NA	False	NA	-10	True	AATAAA	-14	NA	34794480	34790995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792504_34792713_34793851_34793937_34794128_34794270
ES.25815.55	chr5	-	3218	4	NIC	ENSMUSG00000001082.13	novel	1485	12	NA	NA	-16	-5	intron_retention	FALSE	canonical	3	315	junction_3	59.606114526019	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAAGTGCCTTTCCGTC	NA	False	NA	-12	True	AATAAA	-12	NA	34794500	34790997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791685_34791766_34793851_34793937
ES.25815.56	chr5	-	1829	10	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	28	-7	intron_retention	FALSE	canonical	2	34	junction_7	114.760405268036	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACCAAGTGCCTTTCCG	NA	False	NA	-14	True	AATAAA	-10	NA	34794123	34790999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34792307_34792394_34792504_34792713_34792876_34792952_34793087_34793364_34793469_34793753_34793851_34793937
ES.25815.6	chr5	-	2099	11	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	25	junction_5	122.316638279508	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794485	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34791989_34792194_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ES.25815.7	chr5	-	1373	11	NIC	ENSMUSG00000001082.13	novel	1485	12	NA	NA	26	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	118.339384821791	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34793840	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793044_34793364_34793469_34793753
ES.25815.8	chr5	-	1310	10	NNC	ENSMUSG00000001082.13	novel	1485	12	NA	NA	-52	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	160.21058672499	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794237	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792872_34792952_34793108_34794169
ES.25815.9	chr5	-	1872	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	38	-4	-14	1	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCGTCTTACTATTC	NA	False	NA	-3	True	AATAAA	-21	NA	34794498	34790988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ES.25816.1	chr5	-	2813	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	-109	-2	-109	2	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGTGGTGTGTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	34817601	34795877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.10	chr5	-	2684	18	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	162.171744581121	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817461	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806666_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.12	chr5	-	2651	18	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	161.993271678808	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817449	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809219_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.13	chr5	-	3501	17	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	31	-2	intron_retention	FALSE	canonical	1	2	junction_5	166.707453342675	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34817461	34795881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798800_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.15	chr5	-	6752	15	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	71	-2	intron_retention	FALSE	canonical	0	0	junction_4	167.38523329891	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34817421	34795881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798802_34800632_34801424_34802056_34804642_34805735_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.16	chr5	-	3791	10	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	-2101	-2	intron_retention	FALSE	canonical	3	29	junction_4	195.789569578044	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34807950	34795881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34799646_34800189_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669
ES.25816.2	chr5	-	2655	18	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	162.171744581121	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34817469	34795879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806704_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.20	chr5	-	2528	19	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	157.670356624271	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34817461	34795881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807694_34807834_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.21	chr5	-	6593	15	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	42	-2	intron_retention	FALSE	canonical	3	557	junction_7	62.8326656887245	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAAGGCTGTGTGGTGTG	NA	False	NA	-7	True	AATAAA	-14	NA	34817450	34795881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34802159_34804505_34804642_34805735_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.25	chr5	-	6614	11	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	-39	-1007	intron_retention	FALSE	canonical	3	557	junction_3	33.6881284728018	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	34817531	34799677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.26	chr5	-	6370	10	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	2235	-1044	intron_retention	FALSE	canonical	3	557	junction_3	44.7025836798537	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34815257	34799714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34801424_34802056_34804642_34805735_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218
ES.25816.27	chr5	-	940	7	ISM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	67	13306	67	-7793	5prime_fragment	FALSE	canonical	3	566	junction_2	34.2851603791235	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	34817425	34809185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.28	chr5	-	1212	1	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	19	-14869	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAAAAATAAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34817473	34816261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34816300_34817500
ES.25816.3	chr5	-	8025	4	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	68	0	intron_retention	TRUE	canonical	3	29	junction_2	286.49646109895	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34805781	34795879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34799646_34800189_34804642_34805735
ES.25816.4	chr5	-	4564	18	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	155.928738936405	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817456	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34799646_34800189_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.5	chr5	-	4330	1	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	4375	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34800210	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34795900_34800200
ES.25816.6	chr5	-	2731	19	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.414210903642	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817456	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34800632_34800699_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.7	chr5	-	3522	18	NNC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	212.710827636422	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817462	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798802_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34810350_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25816.8	chr5	-	2231	16	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	3278	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	168.332792078338	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34814214	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798802_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084
ES.25816.9	chr5	-	3491	17	NIC	ENSMUSG00000036693.13	novel	2702	18	NA	NA	69	-1	intron_retention	FALSE	canonical	3	557	junction_9	61.5090186476748	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGCTGTGTGGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	34817423	34795880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ES.25817.1	chr5	+	10110	67	FSM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	6	3099	6	-3099	multi-exon	FALSE	canonical	3	38	junction_2	19.3734266519568	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTGCTGCATGTGACA	1562	False	NA	51	True	NA	NA	NA	34919093	35066779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.10	chr5	+	11732	66	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-6	-3139	intron_retention	FALSE	canonical	1	1	junction_24	22.1152441467111	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	1567	False	NA	11	True	AGTAAA	-17	NA	34919098	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985902_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000077_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.11	chr5	+	11203	65	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-5	-3139	intron_retention	TRUE	canonical	0	0	junction_4	23.3399584855967	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	1568	False	NA	11	True	AGTAAA	-17	NA	34919099	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953117_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985902_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35042874_35043848_35043945_35046673_35046862_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.12	chr5	+	15565	61	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-2	-3138	intron_retention	FALSE	canonical	2	3	junction_28	20.176691723097	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	1571	False	NA	12	True	AGTAAA	-18	NA	34919102	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000077_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35064591_35064776_35064938_35065975
ES.25817.13	chr5	+	10110	67	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	0	-3141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	22.054944328419	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACTTTTCCTATGCCCG	1573	False	NA	9	True	AGTAAA	-15	NA	34919104	35066737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961849_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000077_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.14	chr5	+	10120	67	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	0	-3138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_53	20.5632576839089	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	1573	False	NA	12	True	AGTAAA	-18	NA	34919104	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048882_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.15	chr5	+	10065	67	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	0	-3139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	20.8836087586462	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	1573	False	NA	11	True	AGTAAA	-17	NA	34919104	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028047_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.16	chr5	+	13934	56	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	0	-3127	intron_retention	FALSE	canonical	0	0	junction_19	22.3849418099469	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGTAAAGTGTGTGA	1573	False	NA	23	True	AGTAAA	-29	NA	34919104	35066751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034776_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35053368_35054231_35054315_35055872_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35064591_35064776_35064938_35065975
ES.25817.17	chr5	+	9938	66	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	0	-3139	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	20.4610179228178	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	1573	False	NA	11	True	AGTAAA	-17	NA	34919104	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34919454_34940085_34940170_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.18	chr5	+	7278	52	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	19	23059	2	4497	5prime_fragment	FALSE	canonical	3	38	junction_2	13.6544097849154	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTCCCCCTAGTTAACAG	1575	False	NA	NA	False	NA	NA	NA	34919106	35046819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673
ES.25817.2	chr5	+	10127	9	NIC	ENSMUSG00000029104.16	novel	4382	18	NA	NA	7	25	intron_retention	FALSE	canonical	3	38	junction_2	5.52268050859363	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTTGTGACCACAC	1563	False	NA	NA	False	NA	NA	NA	34919094	34972078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34964122_34965212
ES.25817.21	chr5	+	8939	60	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-24	-3136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	22.6941747452006	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	NA	False	NA	14	True	AGTAAA	-20	NA	34964047	35066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34988959_34989122_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.22	chr5	+	179	1	Intergenic	novelGene_21506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAACATAATTGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	34972596	34972775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_34972600_34972800
ES.25817.23	chr5	+	7578	50	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	58456	3138	10191	-3138	3prime_fragment	FALSE	canonical	3	38	junction_13	19.5756310527154	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	2293	False	NA	12	True	AGTAAA	-18	NA	34977543	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.24	chr5	+	6829	43	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	66728	3138	18463	-3138	3prime_fragment	FALSE	canonical	3	38	junction_6	19.2186517727888	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	NA	False	NA	12	True	AGTAAA	-18	NA	34985815	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.25	chr5	+	6592	42	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	19762	-3138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	24.3621301385972	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	NA	False	NA	12	True	AGTAAA	-18	NA	34987114	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006078_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063428_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.26	chr5	+	7515	39	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	24309	-3136	intron_retention	FALSE	canonical	0	0	junction_31	24.7361702036409	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	1910	False	NA	14	True	AGTAAA	-20	NA	34991661	35066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34991733_35000077_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057182_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.27	chr5	+	6180	40	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	24351	-3138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	22.107352684911	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	1952	False	NA	12	True	AGTAAA	-18	NA	34991703	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057182_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.28	chr5	+	8574	33	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-28162	-3127	intron_retention	FALSE	canonical	3	47	junction_4	16.8856447907683	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGTAAAGTGTGTGA	7259	False	NA	23	True	AGTAAA	-29	NA	35006373	35066751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.29	chr5	+	5568	34	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	89473	3136	-25975	-3136	3prime_fragment	FALSE	canonical	3	47	junction_3	16.930311437263	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	9446	False	NA	14	True	AGTAAA	-20	NA	35008560	35066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.3	chr5	+	9895	66	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	7	-3136	combination_of_known_splicesites	FALSE	canonical	0	0	junction_43	21.0016623743266	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	1563	False	NA	14	True	AGTAAA	-20	NA	34919094	35066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.30	chr5	+	5753	31	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	92982	2556	-22466	-2556	3prime_fragment	FALSE	canonical	3	47	junction_3	16.0424437041244	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTCTCTGAGCTATG	NA	False	NA	NA	False	NA	NA	NA	35012069	35067322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.31	chr5	+	4779	29	Fusion	ENSMUSG00000051246.4_ENSMUSG00000029104.16	novel	13215	67	NA	NA	-315	12	multi-exon	FALSE	canonical	0	0	junction_24	34.5706906650883	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGCTTTCCTCTCTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	35034220	35081195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065411_35065692_35072361_35072448_35074994_35075260_35078747_35079024_35080667
ES.25817.32	chr5	+	3890	1	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	900	-2997	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTTTTGGCATGTG	NA	False	NA	NA	False	NA	NA	NA	35035435	35039325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35035400_35039300
ES.25817.33	chr5	+	3664	21	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	2673	-3130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.9111843586786	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGCCCGTGTAAAGTGTG	NA	False	NA	20	True	AGTAAA	-26	NA	35037208	35066748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057081_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.34	chr5	+	6574	20	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	121217	13	-3490	-13	3prime_fragment	FALSE	canonical	3	65	junction_1	10.0549735491841	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTTGAGGCT	NA	False	NA	4	True	ATTAAA	-18	NA	35040304	35069865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.35	chr5	+	6463	15	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-2200	-3138	intron_retention	FALSE	canonical	3	79	junction_3	5.70937288811216	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	27	True	NA	12	True	AGTAAA	-18	NA	35041594	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35064591_35064776_35064938_35065975
ES.25817.36	chr5	+	3122	18	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-1041	-3148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.6978041100606	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGTAACTTTTCCT	192	False	NA	2	True	AGTAAA	-8	NA	35042753	35066730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057125_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.37	chr5	+	3985	17	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-1006	-3139	intron_retention	FALSE	canonical	3	79	junction_3	6.30692823409304	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	227	False	NA	11	True	AGTAAA	-17	NA	35042788	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35064591_35064776_35064938_35065975
ES.25817.38	chr5	+	3595	12	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	8193	-3138	intron_retention	FALSE	canonical	3	87	junction_3	4.04724168900947	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCCTATGCCCGTGT	5499	False	NA	12	True	AGTAAA	-18	NA	35051987	35066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.39	chr5	+	4546	13	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	133671	1026	8964	-1026	3prime_fragment	FALSE	canonical	3	87	junction_4	4.18578945162479	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGCATGTTTCTTCTC	6270	False	NA	3	True	AATAAA	-26	NA	35052758	35068852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.40	chr5	+	1410	5	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	143785	3139	19078	-3139	3prime_fragment	FALSE	canonical	3	90	junction_4	2.1650635094611	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTCCTATGCCCGTG	5795	False	NA	11	True	AGTAAA	-17	NA	35062872	35066739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25817.41	chr5	+	5338	1	NIC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	20733	-13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCTGTTTGAGGCT	7450	False	NA	4	True	ATTAAA	-18	NA	35064527	35069865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35064500_35069900
ES.25817.42	chr5	+	6215	3	FSM	ENSMUSG00000051246.4_ENSMUSG00000029104.16	ENSMUST00000050535.2	2793	3	-3417	-5	-2590	5	multi-exon	FALSE	canonical	1	1	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGAAGCCAGCTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	35069841	35081188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35075260_35078747_35079024_35080667
ES.25817.5	chr5	+	9298	60	ISM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	7	11664	7	-2854	5prime_fragment	FALSE	canonical	3	38	junction_2	17.4343270543812	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTTTTAATCTCTG	1563	False	NA	NA	False	ATTAAA	-11	NA	34919094	35058214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115
ES.25817.6	chr5	+	5272	11	NIC	ENSMUSG00000029104.16	novel	4382	18	NA	NA	8	25	intron_retention	FALSE	canonical	3	38	junction_2	5.08330601085553	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTTGTGACCACAC	1564	False	NA	NA	False	NA	NA	NA	34919095	34972078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34964122_34965212_34965261_34968778_34968860_34970195
ES.25817.7	chr5	+	1058	1	NIC	ENSMUSG00000029104.16	novel	4382	18	NA	NA	-8	-35591	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAGAGTCGACTTAT	1565	False	NA	NA	False	AATAAA	-20	NA	34919096	34920154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_34919100_34920200
ES.25817.8	chr5	+	3378	12	ISM	ENSMUSG00000029104.16	ENSMUST00000148953.8	4382	18	14	7344	-7	25	5prime_fragment	FALSE	canonical	3	38	junction_2	5.29306422836714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTTGTGACCACAC	1566	False	NA	NA	False	NA	NA	NA	34919097	34972078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195
ES.25817.9	chr5	+	10063	67	NNC	ENSMUSG00000029104.16	novel	13215	67	NA	NA	-7	-3136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.8894505912796	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	1566	False	NA	14	True	AGTAAA	-20	NA	34919097	35066742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953310_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ES.25818.1	chr5	-	5161	14	Antisense	novelGene_ENSMUSG00000029104.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCAAAGAGATCCAACAT	NA	False	NA	NA	False	NA	NA	NA	35023196	34984817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_34987222_34989908_34990036_34991602_34991736_35000080_35000244_35003331_35003410_35004795_35005021_35006073_35006152_35006278_35006441_35008560_35008622_35009429_35009575_35010102_35010238_35012015_35012134_35021587_35021712_35021988
ES.25818.2	chr5	-	7902	13	Antisense	novelGene_ENSMUSG00000029104.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCAAAGAGATCCAACAT	NA	False	NA	NA	False	NA	NA	NA	35023247	34984817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_34990036_34991602_34991736_35000080_35000244_35003331_35003410_35004795_35005021_35006073_35006152_35006278_35006449_35008565_35008622_35009429_35009575_35010102_35010238_35012015_35012134_35021587_35021712_35021988
ES.25819.1	chr5	+	5390	17	NNC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	-57	10	intron_retention	TRUE	canonical	0	0	junction_1	6.60935653070706	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAAACTCCTTTCTT	8574	False	NA	22	True	AATAAA	-22	NA	35106731	35190796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35106873_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ES.25819.10	chr5	+	4687	18	NNC	ENSMUSG00000029101.17	novel	4713	17	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.67821706524621	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGTACTGCATTGTGC	8663	False	NA	NA	False	NA	NA	NA	35106820	35196983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180047_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214_35189779_35196506
ES.25819.13	chr5	+	3108	14	NIC	ENSMUSG00000029101.17	novel	3624	15	NA	NA	205	8	intron_retention	FALSE	canonical	2	2	junction_1	6.92393157117882	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTGGAAACTCCTTTC	NA	False	NA	20	True	AATAAA	-20	NA	35147097	35190794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35147213_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
ES.25819.14	chr5	+	3252	15	FSM	ENSMUSG00000029101.17	ENSMUST00000114284.8	3624	15	376	-4	211	4	multi-exon	FALSE	canonical	2	2	junction_1	6.71010508144855	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTGGCTGGAAACTCC	NA	False	NA	16	True	AATAAA	-16	NA	35147103	35190790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35147213_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ES.25819.15	chr5	+	3207	15	NNC	ENSMUSG00000029101.17	novel	3624	15	NA	NA	244	7	intron_retention	FALSE	canonical	0	0	junction_4	8.9511143987546	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGGAAACTCCTTT	NA	False	NA	19	True	AATAAA	-19	NA	35147136	35190793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35147213_35156551_35156574_35176686_35176857_35177657_35177751_35178470_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187815_35187966_35189214
ES.25819.3	chr5	+	5360	15	NNC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_1	8.4470137218029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTCTTGCCT	8594	False	NA	NA	False	TTTAAA	-16	NA	35106751	35190939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35106873_35122116_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
ES.25819.4	chr5	+	5348	16	NNC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	-22	2	intron_retention	FALSE	canonical	0	0	junction_1	8.14425496217357	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGACTGGCTGGAAACT	8609	False	NA	14	True	AATAAA	-14	NA	35106766	35190788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35106873_35122116_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ES.25819.5	chr5	+	5163	16	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	5	6	intron_retention	FALSE	canonical	2	7	junction_15	4.72534537244516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGCTGGAAACTCCTT	8639	False	NA	18	True	AATAAA	-18	NA	35106796	35190792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
ES.25819.6	chr5	+	2643	1	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	6	-23185	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAGACTTCAAACCCAT	8640	False	NA	NA	False	NA	NA	NA	35106797	35109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35106800_35109400
ES.25819.7	chr5	+	6943	14	NNC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	9	3	intron_retention	FALSE	canonical	0	0	junction_3	6.54434124773945	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGACTGGCTGGAAACTC	8643	False	NA	15	True	AATAAA	-15	NA	35106800	35190789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35106869_35122116_35124100_35132560_35132678_35176657_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354
ES.25819.8	chr5	+	3839	15	ISM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	15	3244	12	261	5prime_fragment	FALSE	canonical	3	13	junction_8	3.39342100577706	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCGTCTAGACTCACT	8646	False	NA	NA	False	CATAAA	-36	NA	35106803	35187695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354
ES.25819.9	chr5	+	5445	17	FSM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	23	4	20	0	multi-exon	FALSE	canonical	2	8	junction_15	4.70206071845101	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGTGTGTGTGTCTT	8654	False	NA	NA	False	AAGAAA	-45	NA	35106811	35190935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ES.2582.1	chr10	+	4887	9	NNC	ENSMUSG00000019779.16	novel	4696	9	NA	NA	-6	185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.10653744329409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATAGGCTGAATTTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	34359388	34487459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_34359585_34359740_34360366_34423288_34423411_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481871_34483799_34483968_34484355
ES.2582.2	chr10	+	4813	8	NNC	ENSMUSG00000019779.16	novel	3406	8	NA	NA	-27	-6	intron_retention	FALSE	canonical	0	0	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCACTGTGTTTGATTC	NA	False	NA	NA	False	TATAAA	-42	NA	34359429	34487268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_34360366_34423288_34423413_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481873_34483801_34483968_34484355
ES.2582.4	chr10	+	4569	9	FSM	ENSMUSG00000019779.16	ENSMUST00000019913.15	4696	9	81	46	19	-46	multi-exon	FALSE	canonical	0	0	junction_1	1.87082869338697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATCCGTTCCTGCTTT	NA	False	NA	NA	False	AATAAA	-33	NA	34359475	34487228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_34359585_34359740_34360366_34423288_34423411_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481873_34483801_34483968_34484355
ES.25820.1	chr5	-	184	1	Intergenic	novelGene_21507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGATTCATTACAA	NA	False	NA	NA	False	NA	NA	NA	35121148	35120964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_35121000_35121100
ES.25821.1	chr5	+	2772	7	FSM	ENSMUSG00000044716.13	ENSMUST00000114270.8	2779	7	5	2	5	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTGCCTTGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	35214210	35238306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35214333_35214435_35214482_35221677_35221909_35223793_35223995_35232646_35232767_35234491_35234612_35236374
ES.25822.1	chr5	-	10393	3	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-1	2251	intron_retention	FALSE	canonical	3	836	junction_2	105.5	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	35263041	35246593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35256623_35259738_35259884_35262822
ES.25822.10	chr5	-	1916	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	63	1002	-7	566	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGAGGTCTACAGTTT	NA	False	NA	NA	False	NA	NA	NA	35263047	35249846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.11	chr5	-	3869	6	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-7	98	intron_retention	FALSE	canonical	3	836	junction_5	76.9508934321103	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTGGTATCTCGA	NA	False	NA	0	True	AATACA	-23	NA	35263047	35250314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.12	chr5	-	1543	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	-33	1471	-33	97	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGCCTGGTATCTCG	NA	False	NA	-1	True	AATACA	-22	NA	35263143	35250315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.13	chr5	-	4532	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-8	97	intron_retention	FALSE	canonical	0	0	junction_6	397.703407076178	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGCCTGGTATCTCG	NA	False	NA	-1	True	AATACA	-22	NA	35263048	35250315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35257244_35257390_35259738
ES.25822.14	chr5	-	2852	6	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-7	90	intron_retention	FALSE	canonical	3	836	junction_5	68.3092965854575	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGAGTCCTTGCCTGG	NA	False	NA	-8	True	AATACA	-15	NA	35263047	35250322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35253403_35254874_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.16	chr5	-	4317	5	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-1	89	intron_retention	FALSE	canonical	3	836	junction_4	75.8596566034938	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263041	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.17	chr5	-	1431	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-12	89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	320.548509493923	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263052	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255605_35256500_35256623_35259738_35259884_35262822
ES.25822.18	chr5	-	2911	7	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-7	89	intron_retention	FALSE	canonical	3	809	junction_2	79.6249890982026	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263047	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35252371_35253319_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.2	chr5	-	2964	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	28	-11	28	11	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGTGTCCTACTTGTC	NA	False	NA	4	True	AATAAA	-32	NA	35263082	35248833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.20	chr5	-	1427	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-3	89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	324.217236319309	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263043	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255504_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.21	chr5	-	3738	5	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-7	89	intron_retention	FALSE	canonical	0	0	junction_3	374.561410185299	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263047	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35255034_35255496_35255618_35259738_35259884_35262822
ES.25822.22	chr5	-	5206	4	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-7	89	intron_retention	FALSE	canonical	3	836	junction_3	87.1818023825309	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263047	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35256623_35259738_35259884_35262822
ES.25822.23	chr5	-	2382	7	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-1	89	intron_retention	FALSE	canonical	3	836	junction_6	70.2487643228611	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263041	35250323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.24	chr5	-	1416	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-1	87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	320.681799181885	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTCGAGTCCTTGCC	NA	False	NA	-11	True	AATACA	-12	NA	35263041	35250325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252208_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.25	chr5	-	4249	5	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-1	87	intron_retention	FALSE	canonical	3	809	junction_2	92.3969020043421	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTCGAGTCCTTGCC	NA	False	NA	-11	True	AATACA	-12	NA	35263041	35250325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35252371_35253319_35256623_35259738_35259884_35262822
ES.25822.26	chr5	-	1466	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-20	87	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	316.596053709597	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTCGAGTCCTTGCC	NA	False	NA	-11	True	AATACA	-12	NA	35263060	35250325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250747_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.27	chr5	-	1070	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	241	1670	164	-102	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAAGGACTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	35262869	35250514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.28	chr5	-	8498	2	FSM	ENSMUSG00000029103.17	ENSMUST00000152028.2	630	2	-2	-7866	-2	-967	multi-exon	FALSE	canonical	3	836	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTCTGGGTTAGTGGAA	NA	False	NA	NA	False	NA	NA	NA	35263042	35251605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35259884_35262822
ES.25822.29	chr5	-	4401	3	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	2475	-998	intron_retention	FALSE	canonical	3	837	junction_1	39	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35257383	35251636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35255034_35255496_35255618_35256500
ES.25822.3	chr5	-	2862	9	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	303.960292431429	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCTGGGGAAAATGAC	NA	False	NA	-12	True	AATAAA	-16	NA	35263041	35248849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822_35262868_35262912
ES.25822.30	chr5	-	1140	8	NNC	ENSMUSG00000029103.17	novel	630	2	NA	NA	-7	-1015	at_least_one_novel_splicesite	FALSE	canonical	1	61	junction_1	299.94509701692	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	35263047	35251653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35251762_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.31	chr5	-	11161	1	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	219	-1015	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	35262814	35251653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35251700_35262800
ES.25822.4	chr5	-	3370	7	FSM	ENSMUSG00000029103.17	ENSMUST00000147028.3	1573	7	-9	-1788	-2	-6	multi-exon	FALSE	canonical	3	809	junction_2	75.6233356107021	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCTGGGGAAAATGA	NA	False	NA	-13	True	AATAAA	-15	NA	35263042	35248850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.5	chr5	-	5267	6	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	809	junction_2	86.5461726478993	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCTGGGGAAAATGA	NA	False	NA	-13	True	AATAAA	-15	NA	35263047	35248850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35252371_35253319_35255034_35255496_35256623_35259738_35259884_35262822
ES.25822.6	chr5	-	3338	7	NNC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	-1	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	345.280884047885	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCTGGGGAAAATGA	NA	False	NA	-13	True	AATAAA	-15	NA	35263041	35248850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254905_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.7	chr5	-	4394	7	NIC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	-17	-6	intron_retention	FALSE	canonical	3	809	junction_2	79.6249890982026	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCTGGGGAAAATGA	NA	False	NA	-13	True	AATAAA	-15	NA	35263057	35248850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35252371_35253319_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.8	chr5	-	5783	5	NIC	ENSMUSG00000029103.17	novel	1573	7	NA	NA	1	-11	intron_retention	FALSE	canonical	3	836	junction_4	75.8596566034938	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTCTTTCTGGGGAA	NA	False	NA	-18	True	AATAAA	-10	NA	35263039	35248855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35250731_35252193_35255618_35256500_35256623_35259738_35259884_35262822
ES.25822.9	chr5	-	2030	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	69	882	-1	686	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGGCACTCTCCCACTC	NA	False	NA	NA	False	AATAAA	-19	NA	35263041	35249726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ES.25823.1	chr5	+	168	1	Intergenic	novelGene_21508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35383423	35383591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_35383400_35383600
ES.25824.1	chr5	+	106	1	FSM	ENSMUSG00000045318.7	ENSMUST00000049545.7	3445	1	3337	2	3337	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCAGGTGCATTGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	35438999	35439105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35439000_35439100
ES.25825.1	chr5	+	1792	2	FSM	ENSMUSG00000067438.6	ENSMUST00000087674.6	1526	2	-267	1	-258	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCGCAGCTGTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35546193	35550233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35546834_35549081
ES.25826.1	chr5	+	176	1	Intergenic	novelGene_21509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	35639157	35639333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_35639200_35639300
ES.25827.1	chr5	+	180	1	Intergenic	novelGene_21510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACAATTAAG	NA	False	NA	NA	False	NA	NA	NA	35699579	35699759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_35699600_35699800
ES.25828.1	chr5	+	3266	1	Antisense	novelGene_ENSMUSG00000029097.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCGTTGGGATGACGCGA	725	False	NA	NA	False	NA	NA	NA	35729135	35732401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_35729100_35732400
ES.25829.1	chr5	-	7640	5	ISM	ENSMUSG00000029097.12_ENSMUSG00000106928.2	ENSMUST00000030980.12	3790	11	8540	-4944	8144	1	3prime_fragment	FALSE	canonical	3	72	junction_3	8.25757228245687	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTGTGGTTTCATCA	5427	False	NA	NA	False	NA	NA	NA	35723874	35708602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765
ES.25829.10	chr5	-	3053	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	-267	1004	-267	-1004	multi-exon	FALSE	canonical	3	72	junction_3	7.3	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAGGGCTTCACAGCAT	7359	False	NA	-4	True	AATAAA	-17	NA	35732681	35714550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.11	chr5	-	2740	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-5	-1007	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCAAGGGCTTCACAG	7640	False	NA	-7	True	AATAAA	-14	NA	35732400	35714553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
ES.25829.12	chr5	-	2416	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-628	-1007	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	31.2577990268029	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCAAGGGCTTCACAG	6998	False	NA	-7	True	AATAAA	-14	NA	35733042	35714553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35732868
ES.25829.13	chr5	-	2679	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1111	0	-1111	multi-exon	FALSE	canonical	3	72	junction_3	7.3	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAATGTCCTGGGATCA	7626	False	NA	0	True	AAAAAG	-19	NA	35732414	35714657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.15	chr5	-	5382	9	NIC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-1	-1137	intron_retention	FALSE	canonical	3	72	junction_3	8.0156097709407	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAGGAGCACTCACTA	7644	False	NA	-26	True	TTTAAA	-18	NA	35732396	35714683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35731539_35731902
ES.25829.16	chr5	-	2421	10	NIC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	9	-1140	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	27.9125618872778	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAAAAAGGAGCACTCA	7635	False	NA	-29	True	TTTAAA	-15	NA	35732405	35714686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35731423_35731539_35731902
ES.25829.17	chr5	-	2170	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	0	-1602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0276775759959	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGTTTCCCTTGTC	7626	False	NA	-3	True	NA	NA	NA	35732414	35715148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719935_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.18	chr5	-	2780	11	Fusion	ENSMUSG00000029097.12_ENSMUSG00000055061.6	novel	3790	11	NA	NA	5818	-1602	multi-exon	FALSE	canonical	0	0	junction_10	31.6924281177697	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGTTTCCCTTGTC	NA	False	NA	-3	True	NA	NA	NA	35740289	35715148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35739156
ES.25829.19	chr5	-	2214	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	-27	1603	-27	-1603	multi-exon	FALSE	canonical	3	72	junction_3	7.3	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGGTTTCCCTTGT	7599	False	NA	-4	True	NA	NA	NA	35732441	35715149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.2	chr5	-	4417	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	-625	-2	-625	2	multi-exon	FALSE	canonical	3	72	junction_3	7.3	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATAGAAATATTTATAC	7001	False	NA	NA	False	TATAAA	-23	NA	35733039	35713544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.20	chr5	-	1692	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-503	-1606	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	31.2577990268029	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGCTGTTGGTTTCCCT	7123	False	NA	-7	True	NA	NA	NA	35732917	35715152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35732868
ES.25829.22	chr5	-	2068	9	ISM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	4	7568	4	-7568	5prime_fragment	FALSE	canonical	3	72	junction_1	7.27044530960793	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGACAGAAGCATCTGA	7630	False	NA	NA	False	AATACA	-15	NA	35732410	35721114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ES.25829.23	chr5	-	176	1	Intergenic	novelGene_21511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAGAAAAGAA	3259	False	NA	NA	False	NA	NA	NA	35736781	35736605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_35736600_35736800
ES.25829.3	chr5	-	5971	10	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	4	1	intron_retention	FALSE	canonical	3	16	junction_8	22.0526866312094	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATAGAAATATTTATA	7649	False	NA	NA	False	TATAAA	-22	NA	35732391	35713545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
ES.25829.4	chr5	-	3757	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAATTTAATAGAAATAT	7626	False	NA	NA	False	TATAAA	-17	NA	35732414	35713550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
ES.25829.5	chr5	-	3823	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-608	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.6924281177697	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCAATTTAATAGAAAT	7018	False	NA	NA	False	TATAAA	-15	NA	35733022	35713552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35732442
ES.25829.6	chr5	-	6531	9	NIC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	72	junction_3	8.0156097709407	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTCCCAATTTAATAG	7622	False	NA	NA	False	TATAAA	-11	NA	35732418	35713556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35731539_35731902
ES.25829.7	chr5	-	3640	10	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	33.4058470523343	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAACAGTCCCAAT	7622	False	NA	NA	False	TATAAA	-4	NA	35732418	35713563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35728387_35728457_35730046_35730238_35731423_35731539_35731902
ES.25829.8	chr5	-	3562	10	NIC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	-9	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	27.9125618872778	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAACAGTCCCAAT	7617	False	NA	NA	False	TATAAA	-4	NA	35732423	35713563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35731423_35731539_35731902
ES.25829.9	chr5	-	3842	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.5226318452751	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAACAGTCCCAAT	7626	False	NA	NA	False	TATAAA	-4	NA	35732414	35713563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731325_35731539_35731902
ES.2583.1	chr10	-	2472	2	Antisense	novelGene_ENSMUSG00000019779.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTCACCTTCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	34439723	34437179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_34437733_34437804
ES.25830.1	chr5	+	4031	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.8490764427681	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740324	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.10	chr5	+	6000	19	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_15	22.3123173644702	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740405	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35764542_35765601_35765777_35766142_35766243_35766363_35766432_35767079_35767167_35769358
ES.25830.11	chr5	+	1326	1	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	12	-3031	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35740406	35741732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740400_35741700
ES.25830.12	chr5	+	6143	18	ISM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	23	2	12	-2	intron_retention	FALSE	canonical	3	46	junction_8	8.478754233754	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	22	True	AATAAA	-13	NA	35740406	35771143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079
ES.25830.13	chr5	+	2536	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	15.9436701321857	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAACGTACATCATCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35740414	35769209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35768831
ES.25830.14	chr5	+	5693	18	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	1	-4	intron_retention	FALSE	canonical	3	46	junction_8	8.97863669801921	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCCTGCTTTCTCCCC	NA	False	NA	20	True	AATAAA	-11	NA	35740423	35771141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.15	chr5	+	2240	18	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-4	6	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.9785556428439	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCACTCCTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	35740431	35767269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079
ES.25830.17	chr5	+	5978	20	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_15	24.9003554358372	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740433	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35764542_35765601_35765777_35766142_35766243_35766363_35766432_35766758_35766950_35767079_35767167_35769358
ES.25830.19	chr5	+	3678	19	NIC	ENSMUSG00000029098.18	novel	3501	19	NA	NA	-1	14	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	19.3333333333333	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGAAACGCGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	35740444	35772710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35771345
ES.25830.20	chr5	+	4373	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	18.112474386319	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740444	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35740941_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.21	chr5	+	2872	10	ISM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	55	11242	4	-6969	5prime_fragment	FALSE	canonical	3	8	junction_1	18.5618751713436	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATAGCGCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	35740449	35758709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035
ES.25830.22	chr5	+	6118	17	NNC	ENSMUSG00000029098.18	novel	2956	19	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_11	20.3926304090473	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATCATAACATTTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	35740449	35769219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760268_35760386_35761957_35762081_35762550_35764542_35765601_35765777_35766363_35766432_35767079
ES.25830.23	chr5	+	3819	18	NNC	ENSMUSG00000029098.18	novel	430	4	NA	NA	3023	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.42051211117	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35743889	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35743928_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.24	chr5	+	3776	17	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	4635	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.8035524517883	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	22	True	AATAAA	-13	NA	35745501	35771143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35745658_35745962_35746193_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.25	chr5	+	7343	13	NIC	ENSMUSG00000029098.18	novel	2825	18	NA	NA	5653	-2	intron_retention	FALSE	canonical	3	46	junction_4	7.05139860043539	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	22	True	AATAAA	-13	NA	35746519	35771143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35764542_35765601_35765777_35766363_35766432_35767079
ES.25830.26	chr5	+	2995	11	ISM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	15274	0	-6300	0	3prime_fragment	FALSE	canonical	3	47	junction_10	6.78306715284465	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35755657	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.27	chr5	+	2858	4	ISM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	24473	4	554	-4	3prime_fragment	FALSE	canonical	3	47	junction_3	7.54247233265651	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCCTGCTTTCTCCCC	6898	False	NA	20	True	AATAAA	-11	NA	35764856	35771141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.28	chr5	+	4408	1	FSM	ENSMUSG00000029098.18	ENSMUST00000201659.2	1789	1	-705	-1914	-705	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	8779	False	NA	24	True	AATAAA	-15	NA	35766737	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35766700_35771100
ES.25830.3	chr5	+	4262	18	ISM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	-26	1932	-26	0	5prime_fragment	FALSE	canonical	3	46	junction_8	8.478754233754	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTACATCATCATAACA	NA	False	NA	NA	False	AATAAA	-15	NA	35740357	35769213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079
ES.25830.4	chr5	+	4162	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	-12	-1194	-1	0	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740382	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.5	chr5	+	3995	19	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	16.0146537834094	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740385	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762529_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.6	chr5	+	4037	20	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	19.5296493111389	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740385	35771145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35752915_35752979_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25830.7	chr5	+	1928	14	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	3	-2847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	18.3873509390617	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTGCCCATGACTTG	NA	False	NA	NA	False	NA	NA	NA	35740386	35762831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762529
ES.25830.8	chr5	+	4080	19	NNC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.2703463447072	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTGCTTTCTCCCCTG	NA	False	NA	22	True	AATAAA	-13	NA	35740386	35771143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769245
ES.25830.9	chr5	+	2800	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	9	147	9	-147	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTCTCTGCTGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	35740403	35769804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ES.25831.1	chr5	-	4307	9	NNC	ENSMUSG00000029096.16	novel	2750	9	NA	NA	-25	-71	intron_retention	FALSE	canonical	0	0	junction_3	0.661437827766148	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTGTACTGTATGTTT	NA	False	NA	NA	False	NA	NA	NA	35836841	35809437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35810467_35811414_35811511_35812887_35812937_35819393_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
ES.25832.1	chr5	-	4363	18	FSM	ENSMUSG00000036553.17	ENSMUST00000201511.2	4246	18	-109	-8	-109	5	multi-exon	FALSE	canonical	3	51	junction_17	16.3400287573917	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTCTAGGTGTGTGATA	NA	False	NA	0	True	AGTAAA	-20	NA	35897440	35854518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.10	chr5	-	3705	16	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.3479085861869	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897362	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858036_35863381_35864886_35866988_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.11	chr5	-	3370	19	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.0652405445933	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897400	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35863330_35864276_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.12	chr5	-	4515	19	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.5034781540462	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35886418	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35862040_35862210_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
ES.25832.14	chr5	-	4485	19	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.4665011726541	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897376	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35880292_35880485_35881257_35881489_35897301
ES.25832.15	chr5	-	5084	17	NIC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-611	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	26.8048503073604	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35887231	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35886290
ES.25832.16	chr5	-	4376	18	FSM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	172	1	-92	0	multi-exon	FALSE	canonical	3	19	junction_17	20.7093914138867	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35886448	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
ES.25832.18	chr5	-	4416	18	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.1890390386528	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897324	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876551_35878873_35878949_35881257_35881489_35897232
ES.25832.19	chr5	-	4857	19	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	33.0211305337718	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35886294	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35885004_35885078_35885678
ES.25832.2	chr5	-	4198	18	NIC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-20	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	26.9817316128978	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTCTAGGTGTGTGATA	NA	False	NA	0	True	AGTAAA	-20	NA	35886376	35854518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35854913_35857054_35857140_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
ES.25832.20	chr5	-	4868	17	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_16	24.7285260377565	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897344	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881486_35897301
ES.25832.21	chr5	-	4109	16	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-251	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	24.5727943511157	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35876833	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35876636
ES.25832.23	chr5	-	4513	19	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.002979838392	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897370	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35894167_35894394_35897301
ES.25832.24	chr5	-	4317	18	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	23.5018956755837	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897331	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897232
ES.25832.25	chr5	-	6572	17	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_11	30.557323181195	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897376	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35864886_35866988_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873665_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.26	chr5	-	4446	19	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	31.5168483258568	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35886376	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35880292_35880507_35881327_35881489_35886290
ES.25832.29	chr5	-	7356	17	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-42	0	intron_retention	FALSE	canonical	3	51	junction_16	16.5594336784203	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897373	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.3	chr5	-	4423	19	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	28.8660700477221	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATCTTCTAGGTGTG	NA	False	NA	-5	True	AGTAAA	-15	NA	35897378	35854523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35894266_35894394_35897301
ES.25832.31	chr5	-	6064	12	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-43	0	intron_retention	FALSE	non_canonical	0	0	junction_1	28.6001213659796	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897374	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854574_35862341_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.33	chr5	-	4156	17	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	29.7205079658811	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897414	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871504_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35897301
ES.25832.34	chr5	-	4383	18	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-209	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.0550119230051	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897540	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897373
ES.25832.35	chr5	-	4317	17	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	1070	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	24.5700529099959	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35880220	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35879888
ES.25832.36	chr5	-	5287	16	ISM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	6370	3	1040	0	3prime_fragment	FALSE	canonical	3	53	junction_15	15.0016295411162	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35880250	35854526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873
ES.25832.38	chr5	-	4085	17	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	1053	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	24.5700529099959	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGGTATCTTCTAGG	NA	False	NA	-9	True	AGTAAA	-11	NA	35880237	35854527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35880136
ES.25832.39	chr5	-	5694	4	NIC	ENSMUSG00000036553.17	novel	3411	12	NA	NA	11704	0	intron_retention	FALSE	canonical	3	78	junction_2	6.94422221866655	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGGTATCTTCTAG	NA	False	NA	-10	True	AGTAAA	-10	NA	35861891	35854528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35857252_35857600_35857752_35857928_35858052_35859194
ES.25832.40	chr5	-	4186	18	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	24.335600532701	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAACTCTGGTATCTTCT	NA	False	NA	-12	True	AGTAAA	-8	NA	35897373	35854530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871504_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ES.25832.6	chr5	-	4126	17	NNC	ENSMUSG00000036553.17	novel	4549	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	32.110101117094	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35886371	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871504_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35886290
ES.25832.7	chr5	-	4418	19	NNC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.2140356086455	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897346	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878027_35878183_35878873_35878949_35881257_35881489_35897301
ES.25832.9	chr5	-	4230	17	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	23.5478236786332	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897388	35854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35881257_35881489_35897301
ES.25833.1	chr5	+	1405	2	Intergenic	novelGene_21512	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	4176	False	NA	NA	False	AATAAA	-29	NA	35897627	35899639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_35897819_35898425
ES.25834.1	chr5	-	171	1	Intergenic	novelGene_21513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGCAGGGCTGACC	NA	False	NA	NA	False	NA	NA	NA	35899935	35899764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_35899800_35899900
ES.25835.1	chr5	+	178	1	Intergenic	novelGene_21514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35909493	35909671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_35909500_35909700
ES.25836.1	chr5	+	4138	11	ISM	ENSMUSG00000029095.18	ENSMUST00000114205.8	2579	18	-76	39984	-32	961	5prime_fragment	FALSE	canonical	3	68	junction_5	9.50789145920377	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGAAGAAGAAGAAGGA	1481	False	NA	NA	False	NA	NA	NA	35915191	36001509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
ES.25836.10	chr5	+	3407	17	NNC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	8	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	32.0828395524773	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATGTGTTCAAGCATG	1521	False	NA	NA	False	AATAAA	-28	NA	35915231	36042328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015172_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.11	chr5	+	3478	17	NNC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.3159304508105	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTTGCGAAAGGACAAAA	1524	False	NA	NA	False	AATAAA	-14	NA	35915234	36042314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040647
ES.25836.12	chr5	+	2769	15	NNC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	27.0672820043321	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1526	False	NA	NA	False	AATAAA	-16	NA	35915236	36041810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.13	chr5	+	2653	18	NNC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	13	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.7032908822983	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGACATATATGCAGAG	1526	False	NA	20	True	ATTAAA	-22	NA	35915236	36041474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.14	chr5	+	1748	13	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	15	7	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	18.719234018042	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAGCCTAAGAATGTGA	1528	False	NA	12	True	AAAACA	-15	NA	35915238	36015537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169
ES.25836.15	chr5	+	3097	19	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	32.4267931436374	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTAGTCTCACATCAAC	1529	False	NA	NA	False	AATAAA	-14	NA	35915239	36041808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36013444_36013565_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
ES.25836.16	chr5	+	2905	20	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	17	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.6624189598684	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACATATATGCAG	1530	False	NA	18	True	ATTAAA	-20	NA	35915240	36041472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006143_36006250_36014471_36014525_36014863_36015025_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040648
ES.25836.17	chr5	+	4123	15	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	18	17	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	19.330767481623	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGTCAGGTTGGGTTA	1531	False	NA	NA	False	ACTAAA	-28	NA	35915241	36026553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048
ES.25836.18	chr5	+	2701	19	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	19	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.4896725838165	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAAGTTTTTATTTTA	1532	False	NA	-26	True	NA	NA	NA	35915242	36041428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030577_36032176_36032258_36040649
ES.25836.19	chr5	+	2760	20	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	19	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.4472779541251	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGACATATATGCAGAG	1532	False	NA	20	True	ATTAAA	-22	NA	35915242	36041474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985531_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36006859_36006914_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032176_36032258_36040649
ES.25836.2	chr5	+	1977	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-14	6	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	19.8329760443437	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAGCCTAAGAATGTG	1499	False	NA	11	True	AAAACA	-14	NA	35915209	36015536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
ES.25836.21	chr5	+	2602	20	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-22	2590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	33.2965355521921	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTTTGTTTGTTTG	1535	False	NA	NA	False	NA	NA	NA	35915245	36034818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032268_36034201
ES.25836.22	chr5	+	2690	19	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-22	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	32.3764984876529	467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACACATATGAAGACATAT	1535	False	NA	12	True	ATTAAA	-14	NA	35915245	36041466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015172_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.23	chr5	+	2959	17	NNC	ENSMUSG00000029095.18	novel	3042	20	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	26.2413676282316	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGTCTCACATCAACC	1536	False	NA	NA	False	AATAAA	-15	NA	35915246	36041809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.24	chr5	+	2989	19	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-21	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	27.4896725838165	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTCCCTCTGTCATT	1536	False	NA	NA	False	AATACA	-17	NA	35915246	36041721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.25	chr5	+	2962	18	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.6211361519907	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	1536	False	NA	NA	False	AATAAA	-16	NA	35915246	36041810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.26	chr5	+	2578	17	NNC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-21	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	29.9660615321734	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATGAAGACATATATGC	1536	False	NA	16	True	ATTAAA	-18	NA	35915246	36041470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.27	chr5	+	3577	19	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	36.1957981327824	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAATGTGTTCAAGCA	1549	False	NA	NA	False	AATAAA	-26	NA	35915259	36042326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36006859_36006914_36014471_36014525_36015169_36015313_36032174_36032258_36040646
ES.25836.28	chr5	+	2009	16	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-4	-28	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	30.4444120032268	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAATAAAATTAAAAC	1553	False	NA	-23	True	NA	NA	NA	35915263	36015502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36013444_36013565_36014471_36014525_36015169
ES.25836.29	chr5	+	2510	17	NNC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	-3	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	28.6552787458088	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATATGAAGACATATAT	1561	False	NA	14	True	ATTAAA	-16	NA	35915271	36041468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.3	chr5	+	2549	16	NNC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-5	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	24.7246166131381	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATGAAGACATATATGC	1508	False	NA	16	True	ATTAAA	-18	NA	35915218	36041470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.30	chr5	+	2903	20	NNC	ENSMUSG00000029095.18	novel	1995	22	NA	NA	-3	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.1777718199443	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATGAAGACATATATGC	1561	False	NA	16	True	ATTAAA	-18	NA	35915271	36041470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35931370_35931561_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.31	chr5	+	3491	18	NNC	ENSMUSG00000029095.18	novel	3528	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	31.4529362259207	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGCGAAAGGACAAAAT	1564	False	NA	NA	False	AATAAA	-15	NA	35915274	36042315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36006859_36006914_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.33	chr5	+	3992	19	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	15763	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.0745238345757	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACCTGACCAGTCTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	35931157	36041822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35932197_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36013444_36013565_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.34	chr5	+	2208	16	NNC	ENSMUSG00000029095.18	novel	584	7	NA	NA	16420	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.0829907604985	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAACAAA	NA	False	NA	-20	True	NA	NA	NA	35931814	36015505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35932197_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36006859_36006914_36013444_36013565_36014471_36014525_36015169
ES.25836.35	chr5	+	4254	11	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	16467	955	intron_retention	FALSE	canonical	0	0	junction_1	27.0386760030886	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAGGAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	35931861	36001503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35932197_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
ES.25836.36	chr5	+	2674	19	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	16715	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.1840415027373	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATATATGCAGAGTTT	NA	False	NA	23	True	ATTAAA	-25	NA	35932109	36041477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35932197_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.37	chr5	+	4068	11	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28083	953	intron_retention	FALSE	canonical	3	18	junction_1	22.0519840377232	163	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGGAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	35943477	36001501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
ES.25836.38	chr5	+	1699	13	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28085	-25	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	25.4099717958652	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAACAAA	NA	False	NA	-20	True	NA	NA	NA	35943479	36015505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169
ES.25836.39	chr5	+	2893	17	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.9704453362789	466	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	NA	False	NA	NA	False	AATAAA	-16	NA	35943495	36041810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.4	chr5	+	1870	14	NIC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-4	8	combination_of_known_junctions	FALSE	canonical	3	41	junction_11	15.4395174220198	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCCTAAGAATGTGAA	1509	False	NA	13	True	AAAACA	-16	NA	35915219	36015538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169
ES.25836.40	chr5	+	2759	20	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	28110	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	31.5192418036684	466	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATATGAAGACATATAT	NA	False	NA	14	True	ATTAAA	-16	NA	35943504	36041468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35943629_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.41	chr5	+	2016	13	NNC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	-11918	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	28.7637648208065	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAAGTTTTTATTTTA	902	False	NA	-26	True	NA	NA	NA	35959784	36041428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015337_36032176_36032258_36040649
ES.25836.42	chr5	+	2266	13	NNC	ENSMUSG00000029095.18	novel	660	8	NA	NA	-4425	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8812902290147	466	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTAGTCTCACATCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	35981042	36041808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35981155_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25836.43	chr5	+	858	7	NNC	ENSMUSG00000029095.18	novel	717	6	NA	NA	-1773	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.4623713791146	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAACAAA	NA	False	NA	-20	True	NA	NA	NA	35996924	36015505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35996952_35998624_35998746_36000511_36000611_36006147_36006250_36013444_36013565_36014471_36014525_36015169
ES.25836.44	chr5	+	799	1	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	24	644	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAACTTAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	35998721	35999520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_35998700_35999500
ES.25836.45	chr5	+	4844	5	NNC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-3367	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.416565778706	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCCTTTTCCCTCTGT	684	False	NA	NA	False	AATACA	-13	NA	36002752	36041717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.46	chr5	+	2290	3	ISM	ENSMUSG00000029095.18	ENSMUST00000101280.10	3042	19	89125	26305	-1771	-25	internal_fragment	FALSE	canonical	3	63	junction_1	16	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATTAAAACAAA	941	False	NA	-20	True	NA	NA	NA	36004348	36015505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36006250_36014471_36014525_36015169
ES.25836.47	chr5	+	4796	3	ISM	ENSMUSG00000029095.18	ENSMUST00000153025.2	2864	5	8306	-2070	16	2070	3prime_fragment	FALSE	canonical	3	32	junction_2	31.5	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCTAGCTAAGGATGTA	NA	False	NA	NA	False	NA	NA	NA	36014425	36028606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36014525_36015169_36015309_36024048
ES.25836.48	chr5	+	157	2	Intergenic	novelGene_21515	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	36028367	36092458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36028492_36092425
ES.25836.49	chr5	+	2391	4	NNC	ENSMUSG00000029095.18	novel	1333	15	NA	NA	13759	2589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36028996	36034817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36030569_36031976_36032099_36032176_36032258_36034201
ES.25836.5	chr5	+	3399	16	NNC	ENSMUSG00000029095.18	novel	2953	19	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	24.7246166131381	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGACAAAATGTGTTCAA	1511	False	NA	NA	False	AATAAA	-23	NA	35915221	36042323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.50	chr5	+	4087	1	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	22486	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTCTCACATCAACCT	NA	False	NA	NA	False	AATAAA	-16	NA	36037723	36041810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_36037700_36041800
ES.25836.51	chr5	+	4523	1	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	22554	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTTGCGAAAGGACAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	36037791	36042314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_36037800_36042300
ES.25836.52	chr5	+	6614	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	4	0	4	0	multi-exon	FALSE	canonical	3	11	junction_3	3.8155725323993	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGAGTCGTCACTTC	2009	False	NA	15	True	NA	NA	NA	36050666	36161267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ES.25836.53	chr5	+	7933	16	NIC	ENSMUSG00000029094.13	novel	6618	17	NA	NA	51	-4	intron_retention	FALSE	canonical	3	11	junction_3	3.59382185918495	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTTGTCTGAGTCGTCA	2056	False	NA	11	True	NA	NA	NA	36050713	36161263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36155027_36157042
ES.25836.54	chr5	+	3534	1	Genic_Genomic	ENSMUSG00000029094.13	novel	NA	NA	NA	NA	-893	10029	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	36069532	36073066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_36069500_36073100
ES.25836.55	chr5	+	6316	15	NNC	ENSMUSG00000029094.13	novel	501	3	NA	NA	31782	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.82088078053695	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGAGTCGTCACTTC	NA	False	NA	15	True	NA	NA	NA	36102207	36161267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36102352_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ES.25836.57	chr5	+	6343	15	NNC	ENSMUSG00000029094.13	novel	501	3	NA	NA	31793	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.82088078053695	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGAGTCGTCACTTC	NA	False	NA	15	True	NA	NA	NA	36102218	36161267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36102390_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ES.25836.58	chr5	+	6215	14	ISM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	51822	4	32059	-4	3prime_fragment	FALSE	canonical	3	13	junction_5	3.45555037618711	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTTGTCTGAGTCGTCA	NA	False	NA	11	True	NA	NA	NA	36102484	36161263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ES.25836.59	chr5	+	5488	9	ISM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	75249	1	-15620	-1	3prime_fragment	FALSE	canonical	3	14	junction_6	3.56195171219375	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTGAGTCGTCACTT	NA	False	NA	14	True	NA	NA	NA	36125911	36161266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ES.25836.6	chr5	+	2841	16	NNC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	31.9801327215646	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTCTCACATCAACCTG	1512	False	NA	NA	False	AATAAA	-17	NA	35915222	36041811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35989029_35989087_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.7	chr5	+	4192	12	NNC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	0	961	intron_retention	TRUE	canonical	1	2	junction_1	32.6999886268841	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAGAAGAAGAAGAAGGA	1513	False	NA	NA	False	NA	NA	NA	35915223	36001509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35931370_35931457_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624
ES.25836.8	chr5	+	2441	15	NNC	ENSMUSG00000029095.18	novel	2579	18	NA	NA	3	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	27.0672820043321	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAGACATATATGCAG	1516	False	NA	18	True	ATTAAA	-20	NA	35915226	36041472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015313_36032174_36032258_36040649
ES.25836.9	chr5	+	3503	18	NNC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.7032908822983	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTTGCGAAAGGACAAAA	1516	False	NA	NA	False	AATAAA	-14	NA	35915226	36042314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030574_36032174_36032258_36040649
ES.25837.1	chr5	-	3426	1	Antisense	novelGene_ENSMUSG00000029094.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGGGAGAGGCATTT	3917	False	NA	NA	False	NA	NA	NA	36161099	36157673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_36157700_36161100
ES.25838.1	chr5	+	2819	1	Intergenic	novelGene_21517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGAAAGCCAACATTCA	NA	False	NA	NA	False	NA	NA	NA	36396667	36399486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36396700_36399500
ES.25839.1	chr5	+	2068	1	Intergenic	novelGene_21518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCAGCAGCCTGGACC	7675	False	NA	NA	False	NA	NA	NA	36472852	36474920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36472900_36474900
ES.2584.1	chr10	+	201	1	Intergenic	novelGene_1957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGACTTTATTTATGT	NA	False	NA	NA	False	NA	NA	NA	34872573	34872774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_34872600_34872800
ES.25840.1	chr5	-	5726	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.37938284268917	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGGGTCGGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	36555484	36174523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36176737_36178572_36178680_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36554909
ES.25840.10	chr5	-	6926	1	Intergenic	novelGene_21516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTAGTGACTGCTGC	1261	False	NA	NA	False	NA	NA	NA	36396858	36389932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_36389900_36396900
ES.25840.2	chr5	-	5351	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	30822	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	3.50907530090986	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGGGTCGGTCTCTGC	3118	False	NA	NA	False	NA	NA	NA	36395001	36174523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36394798
ES.25840.3	chr5	-	5221	25	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	166835	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_24	4.03607861117144	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGGGTCGGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	36258988	36174523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36258747
ES.25840.5	chr5	-	5195	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	30851	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	3.95836317854419	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAATCAACAGGGTCGG	3147	False	NA	NA	False	NA	NA	NA	36394972	36174530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36394918
ES.25840.6	chr5	-	5217	27	NNC	ENSMUSG00000029093.15	novel	5707	27	NA	NA	-10787	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	3.95836317854419	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAATCAACAGGGTCGG	NA	False	NA	NA	False	NA	NA	NA	36534049	36174530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36533973
ES.25840.8	chr5	-	4400	3	NNC	ENSMUSG00000029093.15	novel	2089	4	NA	NA	30868	455	intron_retention	FALSE	canonical	2	6	junction_2	4	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3164	False	NA	NA	False	NA	NA	NA	36394955	36307091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36311267_36386488_36386557_36394798
ES.25840.9	chr5	-	3518	4	NNC	ENSMUSG00000029093.15	novel	2089	4	NA	NA	30846	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.73488351136175	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAAAGTGTCTGTGTTG	3142	False	NA	NA	False	NA	NA	NA	36394977	36307547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36310719_36311166_36311267_36386488_36386557_36394798
ES.25841.1	chr5	+	1218	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	-70	2380	-70	-2380	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCACAGTCTACCTCT	NA	False	NA	18	True	AATAAA	-19	NA	36622271	36629044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ES.25841.2	chr5	+	3508	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	20	0	20	0	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTTAAGCACAGCTT	NA	False	NA	NA	False	AATAAA	-33	NA	36622361	36631424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ES.25841.3	chr5	+	3023	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	166	339	166	-339	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCCTCCCAGAGAGCA	NA	False	NA	NA	False	AATAAA	-37	NA	36622507	36631085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ES.25841.4	chr5	+	951	4	NNC	ENSMUSG00000029198.4	novel	3528	4	NA	NA	179	-2386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1214.36027969005	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATGCTGCACAGTCT	NA	False	NA	12	True	AATAAA	-13	NA	36622520	36629038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36622600_36626781_36626945_36627945_36628016_36628399
ES.25841.5	chr5	+	935	4	NNC	ENSMUSG00000029198.4	novel	3528	4	NA	NA	188	-2384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1251.57403119254	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGCTGCACAGTCTAC	NA	False	NA	14	True	AATAAA	-15	NA	36622529	36629040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_36622600_36626781_36626949_36627970_36628028_36628399
ES.25841.6	chr5	+	2327	2	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	190	2384	190	-2384	intron_retention	FALSE	canonical	3	2567	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGCTGCACAGTCTAC	NA	False	NA	14	True	AATAAA	-15	NA	36622531	36629040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36622600_36626781
ES.25841.7	chr5	+	1951	3	NIC	ENSMUSG00000029198.4	novel	3528	4	NA	NA	194	-2384	intron_retention	FALSE	canonical	3	2567	junction_1	84	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGCTGCACAGTCTAC	NA	False	NA	14	True	AATAAA	-15	NA	36622535	36629040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_36622600_36626781_36628028_36628399
ES.25841.8	chr5	+	342	1	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	6211	2530	6211	-2530	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGGGACTCTGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	36628552	36628894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_36628600_36628900
ES.25842.1	chr5	-	3887	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	-95	-1	-95	1	multi-exon	FALSE	canonical	3	130	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTTTGCTTCTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	36641724	36631012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36634307_36641131
ES.25842.2	chr5	-	3934	3	NNC	ENSMUSG00000029196.10	novel	3791	2	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTCTGTTTGCTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	36641661	36631014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36634307_36640321_36640434_36641131
ES.25842.4	chr5	-	2880	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	-9	920	-9	-920	multi-exon	FALSE	canonical	3	130	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTAGTTGTAAAGTGC	NA	False	NA	NA	False	AATAAA	-22	NA	36641638	36631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36634307_36641131
ES.25842.5	chr5	-	2382	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	9	1400	9	672	multi-exon	FALSE	canonical	3	130	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTAGCCTGGCTCAGTGA	NA	False	NA	NA	False	AATATA	-9	NA	36641620	36632413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36634307_36641131
ES.25842.6	chr5	-	1747	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	2	2042	2	30	multi-exon	FALSE	canonical	3	130	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTCCCCTTTATTTCA	NA	False	NA	NA	False	NA	NA	NA	36641627	36633055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36634307_36641131
ES.25842.7	chr5	-	1557	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	29	2205	29	-133	multi-exon	FALSE	canonical	3	130	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATTTTTTTTTTTCAT	NA	False	NA	NA	False	TTTAAA	-24	NA	36641600	36633218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36634307_36641131
ES.25843.1	chr5	+	3574	1	FSM	ENSMUSG00000050677.3	ENSMUST00000060100.3	3585	1	10	1	10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAAAGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	36641941	36645515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36641900_36645500
ES.25843.2	chr5	+	2186	1	FSM	ENSMUSG00000050677.3	ENSMUST00000060100.3	3585	1	26	1373	26	-1373	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTGATTAGCTCATAAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	36641957	36644143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_36642000_36644100
ES.25844.1	chr5	+	173	1	Intergenic	novelGene_21519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAGGAAGAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	36690686	36690859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36690700_36690900
ES.25845.1	chr5	+	175	1	Intergenic	novelGene_21521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	36746052	36746227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36746100_36746200
ES.25846.1	chr5	-	4687	14	NNC	ENSMUSG00000029192.18	novel	4582	14	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.1273474052119	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTACTTTGGT	9487	False	NA	0	True	AATAAA	-22	NA	36739179	36647947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739039
ES.25846.10	chr5	-	4893	15	NIC	ENSMUSG00000029192.18	novel	4649	14	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	32.4895587623382	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	NA	False	NA	-4	True	AATAAA	-18	NA	36750667	36647951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36749302_36749487_36750501
ES.25846.11	chr5	-	3806	12	NNC	ENSMUSG00000029192.18	novel	3884	12	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	27.840751391019	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8884	False	NA	-5	True	AATAAA	-17	NA	36687867	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680380_36682273_36682393_36687766
ES.25846.12	chr5	-	3699	13	NNC	ENSMUSG00000029192.18	novel	4085	13	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.6023965085855	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8884	False	NA	-5	True	AATAAA	-17	NA	36687867	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36650459_36652361_36652523_36652603_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.13	chr5	-	4807	10	NIC	ENSMUSG00000029192.18	novel	3884	12	NA	NA	-33	-1	intron_retention	FALSE	canonical	0	0	junction_5	30.6066239905476	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8826	False	NA	-5	True	AATAAA	-17	NA	36687925	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36671382_36671464_36676616_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.14	chr5	-	3613	11	NIC	ENSMUSG00000029192.18	novel	3884	12	NA	NA	32	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	27.7137150162153	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8932	False	NA	-5	True	AATAAA	-17	NA	36687819	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36687766
ES.25846.15	chr5	-	4457	13	NIC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	30.0817174081239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8932	False	NA	-5	True	AATAAA	-17	NA	36739734	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36728639_36729382_36739698
ES.25846.16	chr5	-	3840	13	NIC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	27.1779117830802	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8928	False	NA	-5	True	AATAAA	-17	NA	36739738	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36739698
ES.25846.17	chr5	-	4582	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	3	5	3	-1	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	8928	False	NA	-5	True	AATAAA	-17	NA	36739738	36647952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
ES.25846.18	chr5	-	4615	14	NIC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	31.7940860117954	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATGTTCACTGTGTAC	8933	False	NA	-6	True	AATAAA	-16	NA	36739733	36647953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682234_36682393_36700520_36700642_36728639_36729382_36739698
ES.25846.19	chr5	-	4669	15	NNC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	35.4187774481047	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATGTTCACTGTGTAC	8935	False	NA	-6	True	AATAAA	-16	NA	36739731	36647953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36650459_36652361_36652621_36654079_36654175_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
ES.25846.2	chr5	-	4660	14	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	36.4631612751488	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTACTTTGGT	NA	False	NA	0	True	AATAAA	-22	NA	36750654	36647947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36750501
ES.25846.20	chr5	-	4753	15	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-38	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	31.7101026842377	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATGTTCACTGTGTAC	NA	False	NA	-6	True	AATAAA	-16	NA	36750658	36647953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36750501
ES.25846.21	chr5	-	4186	15	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-30	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	34.2374660515736	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTATGTTCACTGTGTA	NA	False	NA	-7	True	AATAAA	-15	NA	36750650	36647954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36742125_36742181_36749302_36749487_36750501
ES.25846.22	chr5	-	5224	14	NNC	ENSMUSG00000029192.18	novel	4590	14	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.1273474052119	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTTATGTTCACTGTG	8935	False	NA	-9	True	AATAAA	-13	NA	36739731	36647956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36730035_36739698
ES.25846.23	chr5	-	3732	11	NIC	ENSMUSG00000029192.18	novel	4649	14	NA	NA	-22	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	36.150242046216	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACTTATGTTCACTG	9497	False	NA	-11	True	AATAAA	-11	NA	36739169	36647958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36739030
ES.25846.24	chr5	-	3003	11	NNC	ENSMUSG00000029192.18	novel	538	5	NA	NA	-1	-2823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9200668647015	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGTGT	8858	False	NA	NA	False	NA	NA	NA	36687893	36655331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36657294_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.25	chr5	-	214	1	Intergenic	novelGene_21520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGCTTTTCTTTACCC	7880	False	NA	NA	False	NA	NA	NA	36712935	36712721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_36712700_36712900
ES.25846.26	chr5	-	187	1	Intergenic	novelGene_21522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATACAATGAGCT	2091	False	NA	NA	False	NA	NA	NA	36746575	36746388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_36746400_36746600
ES.25846.29	chr5	-	6798	9	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	24.9596549455316	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTTTTTATTTATCA	NA	False	NA	47	True	AATAAA	-15	NA	36853361	36757826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765430_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.3	chr5	-	9999	14	Fusion	ENSMUSG00000029190.20_ENSMUSG00000029192.18	novel	4582	14	NA	NA	-2495	-1	intron_retention	FALSE	canonical	0	0	junction_12	29.0361945116087	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTGTGTACTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	36773569	36647949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36765281_36765391_36770589
ES.25846.30	chr5	-	6575	10	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.4176620957499	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTTTTTATTTATC	NA	False	NA	46	True	AATAAA	-14	NA	36853370	36757827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36759821_36760012_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.31	chr5	-	6787	10	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.2058194338794	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853313	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36829349_36829428_36830091_36830587_36853198
ES.25846.32	chr5	-	6823	10	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.82591536608	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853323	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36850085_36850190_36853198
ES.25846.33	chr5	-	3005	5	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	36.758502417808	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36770999	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36769221_36769291_36770589
ES.25846.34	chr5	-	6783	9	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	24.422069936842	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853363	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776062_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.36	chr5	-	6611	8	NIC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	24.0882730381234	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853313	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36760148_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.37	chr5	-	6668	9	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.7509469515815	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853280	36757828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776094_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.4	chr5	-	4933	16	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_15	32.7743802382288	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTGTGTACTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	36750650	36647949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36749302_36749487_36750501
ES.25846.40	chr5	-	6050	4	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	-1677	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	35.1220095603249	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTTTGTTGTTTTT	NA	False	NA	39	True	AATAAA	-7	NA	36772751	36757834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36769221
ES.25846.41	chr5	-	5492	6	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7089563482708	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTTTGTTGTTTTT	NA	False	NA	39	True	AATAAA	-7	NA	36853287	36757834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773370_36830483_36830587_36853198
ES.25846.43	chr5	-	4612	4	NNC	ENSMUSG00000029190.20	novel	1148	3	NA	NA	-1638	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.94392028877595	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAATGTTTGTTGTTT	NA	False	NA	37	True	AATAAA	-5	NA	36772712	36757836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36765281_36765391_36769221_36769291_36770589
ES.25846.44	chr5	-	11695	7	NIC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	-1	-19	intron_retention	FALSE	canonical	2	71	junction_3	5.97215762238964	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTTCAAAAAAT	NA	False	NA	26	True	NA	NA	NA	36853282	36757847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.45	chr5	-	6513	9	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	1	-182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	25.8686586432308	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGCACTGTGGTATGAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	36853304	36758010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787131_36830091_36830587_36853198
ES.25846.47	chr5	-	6336	10	NNC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	2	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.4176620957499	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGCGCACTGTGGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	36853312	36758014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36759906_36760091_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ES.25846.48	chr5	-	3888	1	Genic_Genomic	ENSMUSG00000029190.20	novel	NA	NA	NA	NA	-2530	-2033	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACAGTAGGTTAGCTT	NA	False	NA	NA	False	AAAAAG	-17	NA	36781129	36777241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_36777200_36781100
ES.25846.49	chr5	-	1386	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATTTGTATTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	36853407	36828745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36829428_36830091_36830587_36853198
ES.25846.5	chr5	-	3839	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	44	1	-31	-1	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTGTGTACTTTG	8828	False	NA	-2	True	AATAAA	-20	NA	36687923	36647949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.6	chr5	-	3394	8	NIC	ENSMUSG00000029192.18	novel	3884	12	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	32.9538948179645	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTGTGTACTTT	8866	False	NA	-3	True	AATAAA	-19	NA	36687885	36647950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.7	chr5	-	4689	14	FSM	ENSMUSG00000029192.18	ENSMUST00000140607.8	4649	14	-40	0	-29	0	multi-exon	FALSE	canonical	3	13	junction_13	26.7829319490414	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	9490	False	NA	-4	True	AATAAA	-18	NA	36739176	36647951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739030
ES.25846.8	chr5	-	3560	10	NIC	ENSMUSG00000029192.18	novel	4085	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.0152224753859	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	8904	False	NA	-4	True	AATAAA	-18	NA	36687847	36647951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ES.25846.9	chr5	-	5154	16	NIC	ENSMUSG00000029192.18	novel	2765	15	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	33.0059927218612	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	NA	False	NA	-4	True	AATAAA	-18	NA	36750671	36647951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36742125_36742181_36749302_36749689_36750501
ES.25847.1	chr5	+	180	1	Intergenic	novelGene_21523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAAGTTTTCTATAA	NA	False	NA	NA	False	NA	NA	NA	36890428	36890608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36890400_36890600
ES.25848.1	chr5	-	2673	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-28	-1372	-28	1372	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGTACACATCGATTA	NA	False	NA	NA	False	AATAAA	-16	NA	36906022	36903349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36903300_36906000
ES.25848.2	chr5	-	1302	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-23	-6	-23	6	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTGGAGATTATTTA	NA	False	NA	2	True	ATTAAA	-25	NA	36906017	36904715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36904700_36906000
ES.25848.3	chr5	-	1038	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	-28	263	-28	-263	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGGTTCAGTTTTCTG	NA	False	NA	-2	True	ATTAAA	-19	NA	36906022	36904984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36905000_36906000
ES.25849.1	chr5	+	242	1	Intergenic	novelGene_21524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGAAGTTGAGCA	NA	False	NA	NA	False	AATAAA	-5	NA	36912051	36912293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36912100_36912300
ES.2585.1	chr10	-	2932	2	Intergenic	novelGene_1958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTGTCTGTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	35354647	35348600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_35350675_35353789
ES.25850.1	chr5	+	110	1	Intergenic	novelGene_21525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTCTTAGCTACATTC	1950	False	NA	NA	False	NA	NA	NA	36938477	36938587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_36938500_36938600
ES.25851.1	chr5	-	2384	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	37	-773	37	773	multi-exon	FALSE	canonical	3	1678	junction_1	0	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATCGCATTGGGTTGC	NA	False	NA	NA	False	GATAAA	-19	NA	36954079	36951437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36953289_36953546
ES.25851.2	chr5	-	1850	1	NIC	ENSMUSG00000055302.6	novel	1648	2	NA	NA	30	-26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATTAAGTGAAGTCT	NA	False	NA	15	True	AATAAA	-42	NA	36954086	36952236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36952200_36954100
ES.25851.3	chr5	-	1632	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	-26	42	-26	-42	multi-exon	FALSE	canonical	3	1678	junction_1	0	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCGGAGAGTTACTAAGAA	NA	False	NA	-1	True	AATAAA	-26	NA	36954142	36952252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36953289_36953546
ES.25851.4	chr5	-	1469	3	NNC	ENSMUSG00000055302.6	novel	1648	2	NA	NA	68	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	839	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCAGCCCGGAGAGT	NA	False	NA	-10	True	AATAAA	-17	NA	36954048	36952261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36952290_36952349_36953289_36953546
ES.25851.5	chr5	-	1344	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	64	240	64	-240	multi-exon	FALSE	canonical	3	1678	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCCTGTGTGGCCTAGG	NA	False	NA	NA	False	CATAAA	-16	NA	36954052	36952450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36953289_36953546
ES.25851.6	chr5	-	1226	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	29	393	29	-393	multi-exon	FALSE	canonical	3	1678	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAACCTGCCTGGTGA	NA	False	NA	NA	False	TTTAAA	-20	NA	36954087	36952603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36953289_36953546
ES.25852.1	chr5	-	3677	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	1	-348	1	348	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGGCCTCCGATTTT	950	False	NA	-2	True	AATACA	-34	NA	36987996	36963916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.10	chr5	-	4960	17	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	33	14	intron_retention	FALSE	non_canonical	0	0	junction_2	81.7524607810065	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACCTCTCTTTTCACC	982	False	NA	1	True	AATAAA	-35	NA	36987964	36964250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966344_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972657_36972938_36973402_36973588_36974899_36975042_36978225_36978425_36979180_36979359_36981435_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.11	chr5	-	5750	17	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	1	14	intron_retention	FALSE	canonical	3	157	junction_6	23.7960080685816	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACCTCTCTTTTCACC	950	False	NA	1	True	AATAAA	-35	NA	36987996	36964250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.12	chr5	-	3710	17	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	16	12	intron_retention	FALSE	canonical	1	5	junction_10	52.9504485344553	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	965	False	NA	-1	True	AATAAA	-33	NA	36987981	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.13	chr5	-	3290	19	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	1	12	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	51.6278229132842	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	950	False	NA	-1	True	AATAAA	-33	NA	36987996	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973537_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.14	chr5	-	1484	9	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	-1751	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.4027615786414	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	NA	False	NA	-1	True	AATAAA	-33	NA	36972058	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36971988
ES.25852.15	chr5	-	3099	18	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	52	12	combination_of_known_splicesites	FALSE	canonical	1	5	junction_11	53.7340625764408	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	1001	False	NA	-1	True	AATAAA	-33	NA	36987945	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.17	chr5	-	2996	17	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	52	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	55.731183764119	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	1001	False	NA	-1	True	AATAAA	-33	NA	36987945	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.19	chr5	-	3299	19	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	52	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	52.9984858856632	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	1001	False	NA	-1	True	AATAAA	-33	NA	36987945	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987128_36987781
ES.25852.2	chr5	-	3912	16	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	44	348	intron_retention	FALSE	canonical	1	2	junction_14	71.0116109441892	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGGCCTCCGATTTT	993	False	NA	-2	True	AATACA	-34	NA	36987953	36963916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36986971_36987119_36987781
ES.25852.20	chr5	-	2364	3	NNC	ENSMUSG00000029119.10	novel	1725	9	NA	NA	2207	12	intron_retention	FALSE	canonical	1	2	junction_2	128.5	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	NA	False	NA	-1	True	AATAAA	-33	NA	36968100	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36966461_36967635_36967703_36968011
ES.25852.21	chr5	-	738	5	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	2208	12	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	96.5012953280939	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	NA	False	NA	-1	True	AATAAA	-33	NA	36968099	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36968011
ES.25852.22	chr5	-	5212	10	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	-3275	12	intron_retention	FALSE	canonical	1	3	junction_6	86.7768530324892	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGACCTCTCTTTTCA	NA	False	NA	-1	True	AATAAA	-33	NA	36978303	36964252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36965248_36966347_36966461_36967635_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972657_36972938_36973402_36973588_36974899_36975042_36978225
ES.25852.23	chr5	-	3335	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	1	-6	1	6	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCAAGCCAGACCTCTC	950	False	NA	-7	True	AATAAA	-27	NA	36987996	36964258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.24	chr5	-	3298	19	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	23	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.9805397391864	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCAAGCCAGACCTCTC	972	False	NA	-7	True	AATAAA	-27	NA	36987974	36964258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965144_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.25	chr5	-	3684	4	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	-1458	4	intron_retention	FALSE	canonical	3	201	junction_2	24.0554914035583	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTCAAGCCAGACCTC	NA	False	NA	-9	True	AATAAA	-25	NA	36971765	36964260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36966461_36967635_36967753_36970290_36970505_36970612
ES.25852.26	chr5	-	3189	18	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	17	-8	combination_of_known_splicesites	FALSE	canonical	1	6	junction_14	52.9788754663096	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTTCTTCCCATGTTC	966	False	NA	-21	True	AATAAA	-13	NA	36987980	36964272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.27	chr5	-	3104	17	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	15	1886	15	-1	5prime_fragment	FALSE	canonical	3	157	junction_5	23.9161948269368	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTTTAATTTTGT	964	False	NA	NA	False	NA	NA	NA	36987982	36966150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.28	chr5	-	3065	17	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	53.3092027116332	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTTTAATTTTGT	953	False	NA	NA	False	NA	NA	NA	36987993	36966150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36966461_36967635_36967703_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.29	chr5	-	3879	16	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	65	2236	65	-345	5prime_fragment	FALSE	canonical	3	157	junction_4	18.3811497645459	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAATGGAGGTCCTCAC	1014	False	NA	NA	False	AATAAA	-25	NA	36987932	36966500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.3	chr5	-	3643	15	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	4582	348	intron_retention	FALSE	canonical	3	157	junction_6	25.8157719550017	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGGCCTCCGATTTT	5531	False	NA	-2	True	AATACA	-34	NA	36983415	36963916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383
ES.25852.30	chr5	-	3966	16	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	214	-358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	51.0064919615359	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTGAGCTTGATCAA	1163	False	NA	NA	False	AATAAA	-12	NA	36987783	36966513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987532
ES.25852.31	chr5	-	1528	8	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	63	-11269	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	70.9762823276989	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTCTCTTTTTGCCTT	1012	False	NA	NA	False	NA	NA	NA	36987934	36977424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36977881_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.5	chr5	-	1061	5	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	2212	339	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	96.5012953280939	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCAATCTGGCC	NA	False	NA	-11	True	AATACA	-25	NA	36968095	36963925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36968011
ES.25852.6	chr5	-	3469	19	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	22	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.1676825631492	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGGTTGCACAGAC	971	False	NA	NA	False	AATGAA	-23	NA	36987975	36964120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979376_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.7	chr5	-	4189	18	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	16	107	intron_retention	FALSE	canonical	0	0	junction_14	51.7835527187922	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTGAATGAATTATA	965	False	NA	94	True	AAAAAG	-19	NA	36987981	36964157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983190_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.8	chr5	-	3437	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	0	-107	0	107	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTGAATGAATTATA	949	False	NA	94	True	AAAAAG	-19	NA	36987997	36964157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25852.9	chr5	-	3913	18	NIC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	10	18	intron_retention	FALSE	canonical	3	157	junction_6	23.7661618657071	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTCTTTTCACCTGAG	959	False	NA	5	True	AATAAA	-39	NA	36987987	36964246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ES.25853.1	chr5	+	4318	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-229	-1	-229	1	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCTCGCAAGGCTGCT	NA	False	NA	10	True	AATAAA	-22	NA	37025627	37112423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.10	chr5	+	4031	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.166446789415	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025831	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026023_37026101_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.11	chr5	+	4007	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	63.7318601642852	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025833	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088680_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.12	chr5	+	3343	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-21	766	-21	-766	multi-exon	FALSE	canonical	3	174	junction_3	14.0890028036054	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAATGTGGCCAGTC	NA	False	NA	NA	False	ATTAAA	-31	NA	37025835	37111656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.13	chr5	+	4325	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.7018518313663	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025836	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37083917_37084137_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.14	chr5	+	2889	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-17	-1050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.4726212436368	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGTGATGGAGTTT	NA	False	NA	NA	False	GGGGCT	-32	NA	37025839	37111372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097485_37104456_37104582_37106896_37106989_37109694
ES.25853.15	chr5	+	4005	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.8217289350561	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025839	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080366_37083682_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.16	chr5	+	4191	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.9893097518222	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025846	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37081077_37081174_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.17	chr5	+	3614	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-10	484	-10	-484	multi-exon	FALSE	canonical	3	174	junction_3	14.0890028036054	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGACAGAAAAAGATCTC	NA	False	NA	NA	False	NA	NA	NA	37025846	37111938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.18	chr5	+	4272	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9615409931048	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025848	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37029049_37029229_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.19	chr5	+	3963	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.166446789415	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025850	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694_37111722_37111849
ES.25853.2	chr5	+	4110	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	58.3950714958035	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025790	37112422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080366_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.22	chr5	+	4246	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.9390869881118	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025864	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37107452_37107622_37109694
ES.25853.23	chr5	+	3889	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	62.2450355003871	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025871	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694_37111235_37111416
ES.25853.24	chr5	+	4258	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.5264429187947	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025871	37112422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088809_37088938_37089068_37097435_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.25	chr5	+	5147	8	NIC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	18	-3	intron_retention	FALSE	canonical	3	180	junction_4	12.0085003906671	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025874	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37026235_37080311_37080410_37083628_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.26	chr5	+	3203	8	NIC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	21	-772	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	68.8746273000028	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTTGAAGAATGTGG	NA	False	NA	NA	False	ATTAAA	-25	NA	37025877	37111650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37109694
ES.25853.28	chr5	+	4157	10	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9615409931048	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025890	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37075520_37075626_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.31	chr5	+	3757	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	9841	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6444624481284	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	7373	False	NA	7	True	AATAAA	-19	NA	37035847	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37035897_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.32	chr5	+	3842	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	15627	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6444624481284	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37041633	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37041768_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.33	chr5	+	3763	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	15661	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8528756445929	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37041667	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37041768_37080311_37080366_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.34	chr5	+	3501	4	ISM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	71238	0	321	0	3prime_fragment	FALSE	canonical	3	192	junction_2	11.2644968324772	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	5591	False	NA	9	True	AATAAA	-21	NA	37097094	37112422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.35	chr5	+	2287	4	ISM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	71402	1050	485	-1050	3prime_fragment	FALSE	canonical	3	192	junction_2	11.2644968324772	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGTGATGGAGTTT	5755	False	NA	NA	False	GGGGCT	-32	NA	37097258	37111372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.36	chr5	+	3011	4	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	7458	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2191110613317	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37104231	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37104255_37104411_37104582_37106896_37106989_37109694
ES.25853.4	chr5	+	3088	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	-51	1051	-51	-1051	multi-exon	FALSE	canonical	3	174	junction_3	14.0890028036054	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGATGTGATGGAGTT	NA	False	NA	NA	False	GGGGCT	-31	NA	37025805	37111371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.5	chr5	+	4038	8	NIC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-50	-2	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	67.0391296032338	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025806	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37026235_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.6	chr5	+	4088	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-48	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.4726212436368	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025808	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104456_37104582_37106896_37106989_37109694
ES.25853.7	chr5	+	4115	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.9975961093947	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAGGCTCGCAAGGC	NA	False	NA	6	True	AATAAA	-18	NA	37025819	37112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106982_37109694
ES.25853.8	chr5	+	4193	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	65.3518123314113	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025826	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37026312_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ES.25853.9	chr5	+	6427	8	NIC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	174	junction_3	14.9516226680639	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGGCTCGCAAGGCT	NA	False	NA	7	True	AATAAA	-19	NA	37025830	37112420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37106989_37109694
ES.25854.1	chr5	-	153	1	Intergenic	novelGene_21526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACAGAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	37048743	37048590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_37048600_37048700
ES.25855.1	chr5	-	165	1	Intergenic	novelGene_21527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGAGCAAGCGGAGTT	NA	False	NA	NA	False	NA	NA	NA	37059218	37059053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_37059100_37059200
ES.25856.1	chr5	+	1116	1	Antisense	novelGene_ENSMUSG00000039474.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37139210	37140326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_37139200_37140300
ES.25857.1	chr5	-	3575	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	212	0	-60	0	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-18	NA	37146337	37123447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.10	chr5	-	3482	8	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.5613513264683	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTGCCTTCTGGTTT	NA	False	NA	-2	True	AATAAA	-15	NA	37146296	37123450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37128901_37129054_37130529_37130611_37131126_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.12	chr5	-	4386	8	NNC	ENSMUSG00000039474.14	novel	3284	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	44.4994840602973	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTGCCTTCTGGTTT	NA	False	NA	-2	True	AATAAA	-15	NA	37146307	37123450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126867_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.14	chr5	-	3763	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-7293	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	56.4092191046818	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTGCCTTCTGGTTT	NA	False	NA	-2	True	AATAAA	-15	NA	37153842	37123450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37152379_37152590_37153733
ES.25857.15	chr5	-	3650	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	57.0535658394811	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCCTTGCCTTCTGGTT	NA	False	NA	-3	True	AATAAA	-14	NA	37146319	37123451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37145734_37145832_37146209
ES.25857.16	chr5	-	3492	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.3602280321495	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCCTTGCCTTCTGGTT	NA	False	NA	-3	True	AATAAA	-14	NA	37146308	37123451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37124553_37124602_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.17	chr5	-	4042	8	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2071643883968	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCCTTGCCTTCTGGTT	NA	False	NA	-3	True	AATAAA	-14	NA	37146308	37123451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126523_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.18	chr5	-	3730	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.6165832596775	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCCTTGCCTTCTGGTT	NA	False	NA	-3	True	AATAAA	-14	NA	37146275	37123451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37126301_37126523_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.19	chr5	-	3208	6	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.163031098735	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCCTTGCCTTCTGGTT	NA	False	NA	-3	True	AATAAA	-14	NA	37146327	37123451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37126736_37126867_37128901_37128968_37134227_37134311_37139401_37139642_37146209
ES.25857.2	chr5	-	7902	6	NIC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	110	junction_5	11.6378692207809	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCCTTCTGGTTTGA	NA	False	NA	0	True	AATAAA	-17	NA	37146310	37123448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.20	chr5	-	1459	8	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-39	-877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2071643883968	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCGTGATATTGTATC	NA	False	NA	NA	False	NA	NA	NA	37146316	37126721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37127202_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.4	chr5	-	3570	8	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-7309	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	45.6566601083007	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37153858	37123449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37153733
ES.25857.5	chr5	-	3663	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-7272	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	62.1398372624197	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37153821	37123449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37126736_37126867_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37153733
ES.25857.7	chr5	-	6422	7	NIC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-30	1	intron_retention	FALSE	canonical	3	110	junction_6	10.6614570611463	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTGCCTTCTGGTTTG	NA	False	NA	-1	True	AATAAA	-16	NA	37146307	37123449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25857.9	chr5	-	3695	9	NNC	ENSMUSG00000039474.14	novel	3787	8	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	53.8468604005842	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTGCCTTCTGGTTT	NA	False	NA	-2	True	AATAAA	-15	NA	37146330	37123450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37126023_37126736_37126867_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ES.25858.1	chr5	+	2556	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-25	2	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTTTTATTTGTGTT	NA	False	NA	19	True	AATAAA	-22	NA	37185653	37282645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.10	chr5	+	2514	13	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.7620088052575	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37185680	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262295_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.11	chr5	+	8607	1	NIC	ENSMUSG00000063646.19	novel	849	3	NA	NA	11	-48358	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTGAAGTGACAGTATC	NA	False	NA	NA	False	NA	NA	NA	37185689	37194296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185700_37194300
ES.25858.12	chr5	+	5753	11	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	11	-6	intron_retention	FALSE	canonical	3	99	junction_1	28.6489092287996	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATATTTTGCCTTTTTTA	NA	False	NA	11	True	AATAAA	-14	NA	37185689	37282637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37278369_37280623_37280687_37282220
ES.25858.13	chr5	+	540	2	NNC	ENSMUSG00000063646.19	novel	849	3	NA	NA	16	-45920	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGAGTTATCTGCTGA	NA	False	NA	2	True	ATTAAA	-16	NA	37185694	37196734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37196443
ES.25858.14	chr5	+	1887	8	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	19	2648	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	28.9869780756667	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-34	NA	37185697	37264867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602
ES.25858.15	chr5	+	2521	14	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.6969526362755	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37185699	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37270550_37270568_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.17	chr5	+	2333	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.1671511604512	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37187221	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37187295_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.18	chr5	+	5009	1	Antisense	novelGene_ENSMUSG00000097686.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCCCTTCCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	37193203	37198212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_37193200_37198200
ES.25858.19	chr5	+	1556	1	Antisense	novelGene_ENSMUSG00000097686.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAAAATGGCAG	NA	False	NA	NA	False	NA	NA	NA	37195498	37197054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_37195500_37197100
ES.25858.2	chr5	+	1436	3	FSM	ENSMUSG00000063646.19	ENSMUST00000173836.8	849	3	-25	-562	-25	-20	multi-exon	FALSE	canonical	3	99	junction_1	10.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	37185653	37249353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37185944_37242579_37242843_37248470
ES.25858.20	chr5	+	2372	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	48.6269101310055	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37204777	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37204890_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.21	chr5	+	2491	13	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	278	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.1671511604512	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37205094	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37205326_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.22	chr5	+	4209	20	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	763	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.5528595106713	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCATCTGAGTCACTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	37205579	37307957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37205769_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.23	chr5	+	2306	13	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-1280	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.1671511604512	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37206920	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37206967_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.24	chr5	+	2365	13	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-323	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.6528923852601	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	58	False	NA	13	True	AATAAA	-16	NA	37242390	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37242496_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.25	chr5	+	2091	12	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	2843	-4	multi-exon	FALSE	canonical	3	13	junction_1	47.5912346954217	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	3224	False	NA	13	True	AATAAA	-16	NA	37245556	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.26	chr5	+	3850	19	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	1829	4	NA	NA	2843	5	multi-exon	FALSE	canonical	0	0	junction_13	84.914426786873	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCATCTGAGTCACTG	3224	False	NA	NA	False	ATTAAA	-20	NA	37245556	37307956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.27	chr5	+	2066	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5688	22706	-22	-4	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	2458	False	NA	13	True	AATAAA	-16	NA	37248401	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.28	chr5	+	1915	10	NIC	ENSMUSG00000063646.19	novel	2383	13	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	56.0312963694354	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	2480	False	NA	13	True	AATAAA	-16	NA	37248423	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37278284_37278369_37280623_37280687_37282220
ES.25858.29	chr5	+	3795	18	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	84.7376982732628	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTTGACAAGCATCTG	2480	False	NA	NA	False	ATTAAA	-12	NA	37248423	37307948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.3	chr5	+	2614	14	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.2872621209359	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	15	True	AATAAA	-18	NA	37185654	37282641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248281_37248345_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.30	chr5	+	1432	6	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	40471	0	2655	internal_fragment	FALSE	canonical	3	147	junction_1	12.1556571192182	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAT	2480	False	NA	NA	False	AATGAA	-41	NA	37248423	37264874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602
ES.25858.31	chr5	+	3894	20	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	31	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	85.4859661904366	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATCTGAGTCACTGAG	2511	False	NA	NA	False	ATTAAA	-22	NA	37248454	37307958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.32	chr5	+	4689	9	NIC	ENSMUSG00000063646.19	novel	2383	13	NA	NA	39	-4	intron_retention	FALSE	canonical	3	147	junction_1	12.7180973419769	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	2519	False	NA	13	True	AATAAA	-16	NA	37248462	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37263096_37264602_37264663_37274785_37274915_37276122_37278369_37280623_37280687_37282220
ES.25858.33	chr5	+	2069	12	NNC	ENSMUSG00000063646.19	novel	2383	13	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.1278538337893	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	2521	False	NA	13	True	AATAAA	-16	NA	37248464	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37278549_37278616_37280623_37280687_37282220
ES.25858.34	chr5	+	1901	12	NNC	ENSMUSG00000063646.19	novel	2383	13	NA	NA	63	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.2311243208028	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	2543	False	NA	13	True	AATAAA	-16	NA	37248486	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37248966_37257979_37258049_37258128_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.35	chr5	+	1568	11	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	4894	-4	multi-exon	FALSE	canonical	0	0	junction_1	53.6055967227304	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	7374	False	NA	13	True	AATAAA	-16	NA	37253317	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_37253384_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.36	chr5	+	3444	1	NIC	ENSMUSG00000063646.19	novel	2383	13	NA	NA	-7035	5060	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTTTTGGATTCTGGA	NA	False	NA	NA	False	AATAAA	-7	NA	37263835	37267279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37263800_37267300
ES.25858.37	chr5	+	961	4	ISM	ENSMUSG00000063646.19	ENSMUST00000212047.2	1191	6	4986	4	-4462	-4	3prime_fragment	FALSE	canonical	3	167	junction_1	9.93310961716756	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37275856	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.4	chr5	+	4301	20	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	80.6440144320204	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAGCATCTGAGTCACT	NA	False	NA	NA	False	ATTAAA	-19	NA	37185667	37307955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37291580_37291650_37292899_37292990_37298956_37299161_37300136_37300203_37305325_37305374_37306449
ES.25858.5	chr5	+	4415	22	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-6	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	81.5182741779002	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGAGTCACTGAGTCG	NA	False	NA	NA	False	ATTAAA	-25	NA	37185672	37307961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.6	chr5	+	3179	12	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	99	junction_1	27.3072508761542	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	NA	False	NA	15	True	AATAAA	-18	NA	37185677	37282641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25858.7	chr5	+	4561	12	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	-1	intron_retention	FALSE	canonical	3	99	junction_1	27.7908362326936	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCCTTTTTTATTTGT	NA	False	NA	16	True	AATAAA	-19	NA	37185678	37282642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37278369_37280623_37280687_37282220
ES.25858.8	chr5	+	3317	22	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	1	-1081	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	81.5182741779002	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTCTTCCAGAGTCTG	NA	False	NA	NA	False	CATAAA	-15	NA	37185679	37306870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305325_37305374_37306444
ES.25858.9	chr5	+	2607	14	NNC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.4604661914075	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	37185680	37282639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37185944_37230048_37230133_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ES.25859.1	chr5	-	4179	1	Intergenic	novelGene_21528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCTGCTTGTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	37229931	37225752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_37225800_37229900
ES.25859.2	chr5	-	1528	3	Antisense	novelGene_ENSMUSG00000063646.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATGTTCCCTTAGAA	NA	False	NA	NA	False	NA	NA	NA	37236905	37225768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_37227084_37235801_37235943_37236833
ES.2586.1	chr10	-	510	2	FSM	ENSMUSG00000111753.2	ENSMUST00000214107.2	555	2	46	-1	46	1	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	35361346	35354821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_35355139_35361153
ES.25860.1	chr5	+	3877	13	NIC	ENSMUSG00000029121.17	novel	2906	14	NA	NA	13	-1	intron_retention	FALSE	canonical	1	2	junction_4	2.17785572422866	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGTGGGTGTTTTCAC	NA	False	NA	NA	False	AATAAA	-20	NA	37403201	37449476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37403441_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37441543_37443711_37443892_37446148_37446315_37448460
ES.25861.1	chr5	-	176	1	Intergenic	novelGene_21529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37422431	37422255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_37422300_37422400
ES.25862.1	chr5	-	4302	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	20	3	4	-3	multi-exon	FALSE	canonical	1	3	junction_11	2.64764045897474	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTGTTCTTGCCTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37494218	37456517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ES.25862.2	chr5	-	4945	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_10	3.67287353444139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTCTTGCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	37494219	37456518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37472105_37472172_37473668_37473768_37475506_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ES.25862.3	chr5	-	4311	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	-29	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16977917211909	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTCTTGCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	37494267	37456518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ES.25862.4	chr5	-	4554	7	NIC	ENSMUSG00000029122.12	novel	1692	8	NA	NA	-614	-4	intron_retention	FALSE	canonical	2	5	junction_1	1.95078331845327	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTCTTGCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	37470322	37456518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37467712_37468875
ES.25862.5	chr5	-	4164	9	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	-2028	-4	intron_retention	FALSE	canonical	2	5	junction_1	1.71391365010026	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTCTTGCCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	37471736	37456518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37470883_37471702
ES.25862.6	chr5	-	4845	21	NNC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	15	-7	intron_retention	FALSE	canonical	0	0	junction_1	4.37607129740821	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGAGTTGTTCTTGCCT	NA	False	NA	NA	False	AATAAA	-10	NA	37494195	37456521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464590_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37472105_37472172_37473668_37473768_37475506_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ES.25862.7	chr5	-	4292	22	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	25	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.95094638336982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGAGTTGTTCTTGCCT	NA	False	NA	NA	False	AATAAA	-10	NA	37494185	37456521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37472105_37472172_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ES.25863.1	chr5	+	4095	20	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_15	8.17163528730315	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAGAGTGGACCTCA	8828	False	NA	2	True	CATAAA	-18	NA	37495828	37582398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573079_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25863.10	chr5	+	4129	21	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.2726578839169	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8873	False	NA	3	True	CATAAA	-19	NA	37495873	37582399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507496_37507566_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25863.11	chr5	+	4024	20	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	51	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.81072124540698	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATAAGAGTGGACCT	8893	False	NA	0	True	CATAAA	-16	NA	37495893	37582396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507780_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25863.12	chr5	+	4771	12	NIC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	-19354	-1	intron_retention	FALSE	canonical	3	11	junction_7	4.93595344018117	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAGAGTGGACCTCA	NA	False	NA	2	True	CATAAA	-18	NA	37527893	37582398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37576671_37579181_37579284_37581752
ES.25863.2	chr5	+	6407	20	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	-12	-9	intron_retention	FALSE	canonical	0	0	junction_12	10.7110112395074	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTATGTATAAGAGT	8830	False	NA	-6	True	CATAAA	-10	NA	37495830	37582390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37547263_37547946_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37576671_37579181_37579284_37581752
ES.25863.3	chr5	+	1629	9	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	-11	-15476	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	11.0227038425243	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATCTACCAGTCGAG	8831	False	NA	NA	False	NA	NA	NA	37495831	37529632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263
ES.25863.4	chr5	+	2297	9	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	-9	-14806	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	11.0227038425243	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGACACTGCTGCAGT	8833	False	NA	NA	False	AATAAA	-38	NA	37495833	37530302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263
ES.25863.6	chr5	+	4095	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	-5	1	-5	-1	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATAAGAGTGGACCTCA	8837	False	NA	2	True	CATAAA	-18	NA	37495837	37582398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25863.7	chr5	+	4115	21	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.452152888281	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8863	False	NA	3	True	CATAAA	-19	NA	37495863	37582399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37501121_37501176_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573079_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25863.8	chr5	+	5340	10	NNC	ENSMUSG00000050248.12	novel	2796	12	NA	NA	24	-11425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.0833077552474	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCATGGCTTTAGCCTT	8866	False	NA	NA	False	AGTAAA	-16	NA	37495866	37533683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508469_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37529263_37531111_37531410
ES.25863.9	chr5	+	3830	19	NNC	ENSMUSG00000050248.12	novel	4091	20	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.96013117187935	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8866	False	NA	3	True	CATAAA	-19	NA	37495866	37582399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37573079_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ES.25864.1	chr5	+	205	1	Intergenic	novelGene_21530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAATGAGACACGAGG	NA	False	NA	NA	False	AAAAAG	-5	NA	37622526	37622731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_37622500_37622700
ES.25865.1	chr5	-	186	1	Intergenic	novelGene_21531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	37947213	37947027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_37947000_37947200
ES.25866.1	chr5	-	1925	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	1	9	0	-9	multi-exon	FALSE	canonical	2	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGATGTCTGTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	37981926	37977837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_37979045_37981208
ES.25866.2	chr5	-	4089	1	FSM	ENSMUSG00000048450.11	ENSMUST00000183013.2	1880	1	-3	-2206	-2	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGAAATGATGTCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	37981929	37977840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_37977800_37981900
ES.25867.1	chr5	+	179	1	Intergenic	novelGene_21532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	38034564	38034743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38034600_38034700
ES.25868.1	chr5	+	208	1	Intergenic	novelGene_21533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTAAACTAGGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	38075965	38076173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38076000_38076200
ES.25869.1	chr5	+	3657	2	Intergenic	novelGene_21534	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTGGTTCACAGATGG	NA	False	NA	NA	False	NA	NA	NA	38095315	38102064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38095412_38098503
ES.2587.1	chr10	+	179	1	Intergenic	novelGene_1959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35468469	35468648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_35468500_35468600
ES.25870.1	chr5	+	2528	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	476	-2	-15	2	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTGTGGACTTAGATA	NA	False	NA	NA	False	CATAAA	-15	NA	38196561	38295111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ES.25870.2	chr5	+	1562	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	495	945	4	3	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGCAGTCAGTGAGTCT	NA	False	NA	16	True	AATAAA	-16	NA	38196580	38294164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ES.25870.3	chr5	+	1452	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	18	1	0	-1	multi-exon	FALSE	canonical	1	3	junction_10	31.04834939252	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTGCAGTCAGTGA	NA	False	NA	12	True	AATAAA	-12	NA	38196594	38294160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
ES.25870.4	chr5	+	7175	10	NIC	ENSMUSG00000029125.15	novel	3002	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	87	junction_8	10.1980390271856	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTGCAGTCAGTGA	NA	False	NA	12	True	AATAAA	-12	NA	38196595	38294160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38284335_38285387_38285458_38292565_38292647_38293606
ES.25870.5	chr5	+	1794	2	ISM	ENSMUSG00000029125.15	ENSMUST00000202412.4	457	4	-20	9707	11	-9707	5prime_fragment	FALSE	canonical	1	3	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCACTTGACATGAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	38196605	38263777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_38196844_38262221
ES.25870.6	chr5	+	2673	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	522	-193	13	193	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAACTGCACCTGCATTC	NA	False	NA	NA	False	NA	NA	NA	38196607	38295302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ES.25870.7	chr5	+	1796	10	NNC	ENSMUSG00000029125.15	novel	3002	11	NA	NA	14	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.4763598180368	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAATATAAGGGC	NA	False	NA	NA	False	NA	NA	NA	38196608	38293445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38264007_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565
ES.25871.1	chr5	-	178	1	Intergenic	novelGene_21535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTCTTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38286261	38286083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38286100_38286300
ES.25872.1	chr5	-	2129	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	451	1	17	-1	multi-exon	TRUE	canonical	3	5	junction_1	2.8613807855649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGACTGTCTGTACTC	NA	False	NA	0	True	AATAAA	-24	NA	38316800	38294536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ES.25872.2	chr5	-	1659	5	FSM	ENSMUSG00000029126.8	ENSMUST00000201363.4	820	5	-7	-832	-7	424	multi-exon	FALSE	canonical	0	0	junction_4	3.56195171219375	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCACCAGTAGGTAAAC	NA	False	NA	-10	True	ATTAAA	-13	NA	38316756	38295054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316642
ES.25873.1	chr5	+	1656	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	-2	-91	-2	91	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTTGGGGTGTTGTTT	NA	False	NA	114	True	GATAAA	-21	NA	38377811	38391741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.12	chr5	+	1635	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	938.255473383094	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTCTGTATCTATGATA	NA	False	NA	12	True	AATAAA	-13	NA	38377854	38391639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380274_38380399_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.14	chr5	+	7359	7	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	2026	junction_3	130.908046607788	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATGATAACAAATTCTT	NA	False	NA	22	True	AATAAA	-23	NA	38377858	38391649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38382142_38383232_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.15	chr5	+	1508	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	45	10	-5	0	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	False	NA	13	True	AATAAA	-14	NA	38377858	38391640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.16	chr5	+	1534	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	747.665773842163	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	False	NA	13	True	AATAAA	-14	NA	38377859	38391640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390558_38390672_38391334
ES.25873.18	chr5	+	3446	7	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-2	3	intron_retention	FALSE	canonical	3	2026	junction_3	161.297602792685	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	16	True	AATAAA	-17	NA	38377861	38391643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38381970_38382142_38383232_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.19	chr5	+	6030	7	NNC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_1	860.747882173791	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377865	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38380576_38381976_38382142_38383232_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.2	chr5	+	1444	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	791.240204504605	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCTATGATAACAAATT	NA	False	NA	19	True	AATAAA	-20	NA	38377813	38391646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38381970_38382142_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.20	chr5	+	5948	8	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	3	1	intron_retention	FALSE	canonical	3	182	junction_1	747.018618460431	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377866	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38380576_38381970_38382142_38383232_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.21	chr5	+	4093	9	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	182	junction_1	699.59254882753	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377870	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.23	chr5	+	4558	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	2955	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCAGTGTTGTATTT	NA	False	NA	NA	False	AATAAA	-10	NA	38377871	38394605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.25	chr5	+	3353	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	2026	junction_4	151.651587797928	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGATAACAAATTCT	NA	False	NA	21	True	AATAAA	-22	NA	38377872	38391648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38381970_38382142_38383232_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.26	chr5	+	1016	5	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1029.04348790515	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377873	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.27	chr5	+	5484	8	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	2026	junction_4	139.690912447475	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377874	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.28	chr5	+	1409	9	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	739.268631402009	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGATAACAAATTCT	NA	False	NA	21	True	AATAAA	-22	NA	38377874	38391648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38382061_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.29	chr5	+	1794	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	46	junction_1	901.272036596397	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377874	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380274_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.3	chr5	+	1659	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATGATAACAAATTCTT	NA	False	NA	22	True	AATAAA	-23	NA	38377814	38391649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.30	chr5	+	1322	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	802.610206050947	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377874	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.32	chr5	+	10847	5	NIC	ENSMUSG00000067367.10	novel	1504	9	NA	NA	4	-3	intron_retention	FALSE	canonical	3	2295	junction_3	58.4251658106334	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAATTCTGTATCTATGA	NA	False	NA	10	True	AATAAA	-11	NA	38377876	38391637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38385307_38385393_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.35	chr5	+	3520	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	7	1	intron_retention	FALSE	canonical	3	190	junction_2	924.507855840178	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377879	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.37	chr5	+	1455	9	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	748.663966259229	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTCTGTATCTATGATA	NA	False	NA	12	True	AATAAA	-13	NA	38377890	38391639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385300_38385406_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.38	chr5	+	1695	11	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1008.58886073563	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377894	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380274_38380399_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.40	chr5	+	4073	6	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	-766	3	intron_retention	FALSE	canonical	3	2026	junction_2	142.768343830136	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTATCTATGATAACAA	NA	False	NA	16	True	AATAAA	-17	NA	38381225	38391643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38382142_38383232_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.5	chr5	+	1559	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	884.796412378591	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	False	NA	13	True	AATAAA	-14	NA	38377814	38391640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38380477_38380576_38382061_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.6	chr5	+	4491	7	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	5	1	intron_retention	FALSE	canonical	3	2026	junction_3	163.616081795838	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377818	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38377980_38381970_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.7	chr5	+	1656	10	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	991.721187421267	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAATTCTGTATCTATGATA	NA	False	NA	12	True	AATAAA	-13	NA	38377830	38391639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390558_38390672_38391334
ES.25873.8	chr5	+	1340	8	NNC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	801.20274383872	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377831	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38377980_38381970_38382075_38385212_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25873.9	chr5	+	1680	9	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	2	91	junction_1	729.180018925368	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTATCTATGATAAC	NA	False	NA	14	True	AATAAA	-15	NA	38377841	38391641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38378134_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ES.25874.1	chr5	-	4123	8	NIC	ENSMUSG00000029127.16	novel	2868	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	15.5471632690432	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTACTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	38377777	38347078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38349482_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
ES.25874.10	chr5	-	4936	6	NIC	ENSMUSG00000029127.16	novel	2721	7	NA	NA	8	0	intron_retention	FALSE	canonical	2	5	junction_3	15.4867685460848	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATATTTTGTAAATT	NA	False	NA	NA	False	AATAAA	-22	NA	38377790	38357589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
ES.25874.11	chr5	-	2961	8	NIC	ENSMUSG00000029127.16	novel	2721	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.2107839771171	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTATATTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	38377757	38357592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38369189_38369433_38370651_38371728_38373790_38373958_38377666
ES.25874.12	chr5	-	3841	5	NIC	ENSMUSG00000029127.16	novel	1654	6	NA	NA	0	-1	intron_retention	FALSE	canonical	2	4	junction_3	17.0440605490593	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377775	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38361002_38361088_38361172_38363232_38363307_38373790_38373958_38377666
ES.25874.13	chr5	-	4298	9	NNC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_6	19.1245914989053	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377784	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363303_38367961_38368009_38368238_38368288_38369189_38371728_38373790_38373958_38377666
ES.25874.14	chr5	-	2747	7	FSM	ENSMUSG00000029127.16	ENSMUST00000126267.8	2721	7	-30	4	11	-1	multi-exon	FALSE	canonical	2	5	junction_4	14.1391890385081	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377787	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
ES.25874.15	chr5	-	1706	7	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	0	-1	combination_of_known_junctions	TRUE	canonical	2	6	junction_5	13.6961065027012	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377775	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38373790_38373958_38377666
ES.25874.16	chr5	-	4805	6	NIC	ENSMUSG00000029127.16	novel	2721	7	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	5	junction_3	14.0057131200093	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377784	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38358658_38360839_38361002_38361088_38363307_38370651_38371728_38373790_38373958_38377666
ES.25874.17	chr5	-	2741	8	NNC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.0969655012833	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377772	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373920_38377666
ES.25874.18	chr5	-	2782	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	26	170	0	-1	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTTTATATTTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	38377775	38357593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
ES.25874.19	chr5	-	4242	8	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_5	14.7924415337906	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377774	38357594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38371728_38373790_38373958_38377666
ES.25874.2	chr5	-	3815	1	NIC	ENSMUSG00000029127.16	novel	2868	6	NA	NA	10247	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	38350894	38347079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38347100_38350900
ES.25874.20	chr5	-	3025	9	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	16.9170771707172	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38377776	38357594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38369433_38370651_38371728_38373790_38373958_38377666
ES.25874.21	chr5	-	4853	6	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-3060	-2	intron_retention	FALSE	canonical	3	18	junction_4	11.2320968656792	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTTTATATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	38373956	38357594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790
ES.25874.23	chr5	-	3930	4	NIC	ENSMUSG00000029127.16	novel	420	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	4	junction_2	19.6694913225759	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATGTTTTATATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	38377779	38357595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38361172_38363232_38363307_38373790_38373958_38377666
ES.25874.24	chr5	-	10088	6	NNC	ENSMUSG00000029127.16	novel	2028	7	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_4	16.7976188788769	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATGTTTTATATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	38377768	38357595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38371745_38373790_38373958_38377666
ES.25874.25	chr5	-	7257	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	21	-4633	-2	-3600	multi-exon	FALSE	canonical	3	43	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAATGTGTGTGGCAGG	NA	False	NA	NA	False	AATAAA	-19	NA	38377777	38364748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38371728_38373790_38373958_38377666
ES.25874.26	chr5	-	1392	1	Intergenic	novelGene_21536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTGTTGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	38366379	38364987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38365000_38366400
ES.25874.27	chr5	-	3081	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	22	-458	-1	458	multi-exon	FALSE	canonical	3	43	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGCTTACATGGTCA	NA	False	NA	NA	False	AAGAAA	-5	NA	38377776	38368923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38371728_38373790_38373958_38377666
ES.25874.28	chr5	-	2868	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	19	-242	-4	242	multi-exon	FALSE	canonical	3	43	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGCCTTCTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	38377779	38369139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38371728_38373790_38373958_38377666
ES.25874.3	chr5	-	10964	6	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	-5	2300	intron_retention	FALSE	canonical	1	1	junction_4	16.6060230037177	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCGGTACCAGCGTT	NA	False	NA	NA	False	AATAAA	-22	NA	38377780	38355123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38373958_38377666
ES.25874.4	chr5	-	5262	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	16	-2300	-10	2300	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCGGTACCAGCGTT	NA	False	NA	NA	False	AATAAA	-22	NA	38377785	38355123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
ES.25874.5	chr5	-	4129	6	FSM	ENSMUSG00000029127.16	ENSMUST00000143436.8	1654	6	-7	-2468	-1	2299	multi-exon	FALSE	canonical	2	4	junction_4	15.2918278828922	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCGGTACCAGCGT	NA	False	NA	NA	False	AATAAA	-21	NA	38377776	38355124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38373790_38373958_38377666
ES.25874.7	chr5	-	5349	8	NNC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	0	2268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.0969655012833	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAACTATGAAAA	NA	False	NA	NA	False	NA	NA	NA	38377768	38355155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370515_38371728_38373790_38373958_38377666
ES.25874.9	chr5	-	1831	6	FSM	ENSMUSG00000029127.16	ENSMUST00000143436.8	1654	6	-4	-173	-2	4	multi-exon	FALSE	canonical	2	4	junction_4	15.2918278828922	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGTTTCTAAGCATTA	NA	False	NA	NA	False	NA	NA	NA	38377773	38357419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38373790_38373958_38377666
ES.25875.1	chr5	+	167	1	Intergenic	novelGene_21537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGTGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	38400900	38401067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38400900_38401100
ES.25876.1	chr5	+	1307	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	-4	-12	-4	12	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGGGCTTGTTTCTG	NA	False	NA	NA	False	AATAAA	-37	NA	38417524	38426990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ES.25876.2	chr5	+	5666	2	NIC	ENSMUSG00000067365.12	novel	827	3	NA	NA	24	640	intron_retention	FALSE	canonical	3	253	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTAGTCCCTGTATCA	NA	False	NA	NA	False	NA	NA	NA	38417552	38425891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_38419483_38422155
ES.25876.3	chr5	+	1339	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	-13	-600	0	600	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38417714	38425851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
ES.25876.4	chr5	+	695	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	190	406	4	-406	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTGATTGCTTCTC	NA	False	NA	NA	False	AATAAA	-22	NA	38417718	38426572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ES.25876.5	chr5	+	3978	3	FSM	ENSMUSG00000067365.12	ENSMUST00000128025.2	827	3	5	-3156	5	639	multi-exon	FALSE	canonical	3	219	junction_1	17	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTTAGTCCCTGTATC	NA	False	NA	NA	False	NA	NA	NA	38417735	38425890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38417837_38419340_38419483_38422155
ES.25877.1	chr5	+	3404	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	-257	-6	-257	5	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTCTTGCGAATTT	NA	False	NA	NA	False	AAAAAG	-1	NA	38434490	38461557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
ES.25877.2	chr5	+	2677	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	-235	699	-235	132	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTATATCCAGTTCCTG	NA	False	NA	NA	False	AATAAA	-23	NA	38434512	38460852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
ES.25878.1	chr5	+	178	1	Intergenic	novelGene_21538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTCTCCAAATCT	NA	False	NA	NA	False	NA	NA	NA	38594963	38595141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38595000_38595100
ES.25879.1	chr5	+	1622	2	Antisense	novelGene_ENSMUSG00000005107.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTGGGCTTTGAACT	NA	False	NA	NA	False	AATAAA	-14	NA	38645547	38648752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38645638_38647220
ES.2588.1	chr10	-	3244	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	0	-26	0	26	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGGAAATATCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	35587888	35584644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_35584600_35587900
ES.2588.2	chr10	-	3092	2	Genic_Genomic	ENSMUSG00000063953.4	novel	3218	1	NA	NA	3	13	multi-exon	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	35587885	35584657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_35585176_35585311
ES.2588.3	chr10	-	3072	2	Genic_Genomic	ENSMUSG00000063953.4	novel	3218	1	NA	NA	2	-17	multi-exon	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	35587886	35584687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_35587233_35587359
ES.2588.4	chr10	-	3046	2	Genic_Genomic	ENSMUSG00000063953.4	novel	3218	1	NA	NA	2	-17	multi-exon	FALSE	canonical	2	3	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	35587886	35584687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_35587651_35587803
ES.2588.5	chr10	-	2986	2	Genic_Genomic	ENSMUSG00000063953.4	novel	3218	1	NA	NA	1	-17	multi-exon	FALSE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	35587887	35584687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_35587230_35587443
ES.2588.6	chr10	-	1904	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	2	1312	2	-1312	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGACTCCAGTTGC	NA	False	NA	NA	False	ATTAAA	-29	NA	35587886	35585982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_35586000_35587900
ES.25880.1	chr5	+	2144	2	Antisense	novelGene_ENSMUSG00000005107.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTGACAGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	38651564	38655015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38651704_38653010
ES.25880.2	chr5	+	185	2	Antisense	novelGene_ENSMUSG00000005107.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAGACCGTTTCTCATG	NA	False	NA	NA	False	NA	NA	NA	38651586	38652395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38651704_38652327
ES.25880.3	chr5	+	3832	1	Intergenic	novelGene_21539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATCGTCTCAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	38651588	38655420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38651600_38655400
ES.25881.1	chr5	-	3189	12	FSM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	48	365	48	1	multi-exon	TRUE	canonical	1	1	junction_11	4.00619355209649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTATTCTGCCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	38637601	38506980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38637381
ES.25881.2	chr5	-	3161	13	NNC	ENSMUSG00000005107.14	novel	3164	14	NA	NA	-2382	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	4.04402851951698	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTATTCTGCCTTGGC	NA	False	NA	NA	False	NA	NA	NA	38651682	38506981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38640647_38640729_38651570
ES.25881.3	chr5	-	1459	8	ISM	ENSMUSG00000005107.14	ENSMUST00000067886.12	3602	12	43571	1540	4094	270	3prime_fragment	FALSE	canonical	1	2	junction_4	4.1206300291017	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATCTGGTCTGATGG	NA	False	NA	NA	False	AATAAA	-36	NA	38594078	38508155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882
ES.25882.1	chr5	+	6993	1	Antisense	novelGene_ENSMUSG00000005103.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTTTTGTTCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	38683712	38690705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38683700_38690700
ES.25883.1	chr5	-	3607	5	ISM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	28285	-2039	-1525	2039	3prime_fragment	FALSE	canonical	3	821	junction_3	35.5202407086439	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAACTAGGTGTGTGG	NA	False	NA	NA	False	ATTAAA	-12	NA	38690864	38682116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826
ES.25883.10	chr5	-	4079	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-73	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	241.985231101003	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719051	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.11	chr5	-	3171	18	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	422.198570838407	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38718981	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38699176_38699265_38703016_38703198_38704286_38704435_38706301_38706387_38708719_38708811_38718422_38718545_38718858
ES.25883.15	chr5	-	4552	12	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-63	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	261.1516768989	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719041	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38698222_38703016_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.16	chr5	-	2979	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719041	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692687_38694485_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.17	chr5	-	5071	12	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	13132	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	371.551627059078	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38705754	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016
ES.25883.2	chr5	-	3104	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGGCTCTATGTGGCG	NA	False	NA	-1	True	ATTAAA	-22	NA	38719158	38684149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.21	chr5	-	2047	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-62	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	307.725394414154	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719040	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38684324_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.23	chr5	-	2948	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	355.516418002584	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719042	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718854
ES.25883.24	chr5	-	4568	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-39	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	237.510111899342	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	False	NA	-8	True	ATTAAA	-15	NA	38719017	38684156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.25	chr5	-	2917	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	357.402826810652	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGATCACTGGCTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	38719042	38684157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718884
ES.25883.26	chr5	-	3109	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	306.656392167427	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGATCACTGGCTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	38719006	38684157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.27	chr5	-	4823	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	25	-2	intron_retention	FALSE	canonical	2	28	junction_10	234.917535575167	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGATCACTGGCTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	38719124	38684157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.28	chr5	-	3820	13	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	10097	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	370.482596307393	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGATCACTGGCTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	38708789	38684157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38704435_38708719
ES.25883.29	chr5	-	3180	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	355.311504607045	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGATCACTGGCTCT	NA	False	NA	-9	True	ATTAAA	-14	NA	38718857	38684157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38711981_38712053_38718422
ES.25883.30	chr5	-	2865	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	310.943429463513	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGGATCACTGGCTC	NA	False	NA	-10	True	ATTAAA	-13	NA	38718973	38684158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687409_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.35	chr5	-	3133	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-39	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	316.818933598342	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGGATCACTGGCTC	NA	False	NA	-10	True	ATTAAA	-13	NA	38719017	38684158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.36	chr5	-	4777	14	NIC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-64	-3	intron_retention	FALSE	canonical	3	720	junction_7	76.5009958553737	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGGATCACTGGCTC	NA	False	NA	-10	True	ATTAAA	-13	NA	38719042	38684158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.37	chr5	-	4485	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	81	-135	intron_retention	FALSE	non_canonical	0	0	junction_5	240.665595784031	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTTTCTTTGCGTGT	NA	False	NA	46	True	ATTAAA	-21	NA	38719068	38684290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.38	chr5	-	2975	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-22	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTTTCTTTGCGTG	NA	False	NA	45	True	ATTAAA	-20	NA	38719171	38684291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.4	chr5	-	3168	16	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	347.876504268716	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACTGGCTCTATGTGGC	NA	False	NA	-2	True	ATTAAA	-21	NA	38719145	38684150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.40	chr5	-	2924	16	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-64	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	347.876504268716	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTTTCTTTGCGTG	NA	False	NA	45	True	ATTAAA	-20	NA	38719042	38684291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.41	chr5	-	2684	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-22	-138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	308.856060854455	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCAGTTTCTTTGCG	NA	False	NA	43	True	ATTAAA	-18	NA	38718940	38684293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38686955_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.43	chr5	-	2885	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	25	-140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	356.996369958107	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATTGGCAGTTTCTTTG	NA	False	NA	41	True	ATTAAA	-16	NA	38719124	38684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718543_38718858
ES.25883.47	chr5	-	3709	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-64	-140	intron_retention	FALSE	non_canonical	0	0	junction_5	316.36019842567	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATTGGCAGTTTCTTTG	NA	False	NA	41	True	ATTAAA	-16	NA	38719042	38684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.49	chr5	-	2849	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-62	-141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	311.34120661868	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGATTGGCAGTTTCTTT	NA	False	NA	40	True	ATTAAA	-15	NA	38719040	38684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697938_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.50	chr5	-	2833	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-35	-142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	310.703513770584	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGATTGGCAGTTTCTT	NA	False	NA	39	True	ATTAAA	-14	NA	38719013	38684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688504_38690839_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.52	chr5	-	3951	14	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	85	-142	intron_retention	FALSE	non_canonical	0	0	junction_6	241.985231101003	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGATTGGCAGTTTCTT	NA	False	NA	39	True	ATTAAA	-14	NA	38719064	38684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.54	chr5	-	2342	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.56139122164	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGCGTACCTAAAAC	NA	False	NA	0	True	AATAAA	-18	NA	38719169	38684922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.55	chr5	-	2382	16	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	347.876504268716	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGCGTACCTAAAAC	NA	False	NA	0	True	AATAAA	-18	NA	38719131	38684922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.56	chr5	-	2063	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	305.667352872767	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCATGTGGAGCGTAC	NA	False	NA	-7	True	AATAAA	-11	NA	38718934	38684929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704323_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.57	chr5	-	4201	1	FSM	ENSMUSG00000005103.13	ENSMUST00000202199.2	3909	1	-263	-29	0	29	mono-exon	FALSE	NA	NA	NA	NA	NA	748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAATGAGCACACA	NA	False	NA	NA	False	NA	NA	NA	38719149	38714948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38714900_38719100
ES.25883.58	chr5	-	3777	2	FSM	ENSMUSG00000005103.13	ENSMUST00000201330.2	353	2	-121	-3303	-61	29	multi-exon	FALSE	canonical	3	863	junction_1	0	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAATGAGCACACA	NA	False	NA	NA	False	NA	NA	NA	38719039	38714948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38718545_38718858
ES.25883.7	chr5	-	4175	13	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_6	251.866187466458	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38718930	38684155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692682_38694479_38694570_38697355_38697590_38697846_38698222_38703016_38704435_38708719_38708811_38718422_38718545_38718858
ES.25883.8	chr5	-	2878	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	307.580120638907	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38718924	38684155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692669_38694456_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718854
ES.25884.1	chr5	+	851	1	Intergenic	novelGene_21540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38719231	38720082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38719200_38720100
ES.25885.1	chr5	+	1403	1	FSM	ENSMUSG00000086422.2	ENSMUST00000147322.2	399	1	350	-1354	350	1354	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAACGGGTGTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	38732723	38734126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_38732700_38734100
ES.25886.1	chr5	+	175	1	Intergenic	novelGene_21541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	38820449	38820624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38820400_38820600
ES.25887.1	chr5	+	3649	9	NNC	ENSMUSG00000079528.10	novel	439	4	NA	NA	-51085	118075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.63790805271381	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTAAGTTTATGATT	NA	False	NA	NA	False	AATAAA	-16	NA	38842240	39023315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_38842438_38863808_38864827_38866445_38866602_38868184_38868371_38899128_38899324_38901486_38901560_38913480_38914420_38917217_38917401_39022613
ES.25887.2	chr5	+	2282	6	Antisense	novelGene_ENSMUSG00000077273.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	3.96988664825584	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTAGAAATTACT	NA	False	NA	NA	False	NA	NA	NA	38842245	38868594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38842438_38849294_38849459_38861055_38861166_38863808_38865059_38866445_38866602_38868184
ES.25887.3	chr5	+	1709	3	Antisense	novelGene_ENSMUSG00000077273.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTCGTGTCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	38856076	38865366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38856125_38861062_38861166_38863808
ES.25887.4	chr5	+	1754	5	Antisense	novelGene_ENSMUSG00000077273.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.38748219369606	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGTTTACGGTCAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	38856076	38868617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38856125_38861062_38861166_38863808_38864823_38866445_38866602_38868184
ES.25887.6	chr5	+	1659	2	Antisense	novelGene_ENSMUSG00000039315.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATACTTTTTTTCCC	NA	False	NA	NA	False	AATAAA	-22	NA	38863911	38867415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_38865465_38867309
ES.25887.7	chr5	+	1291	1	Intergenic	novelGene_21545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTAGAAATTACT	NA	False	NA	NA	False	NA	NA	NA	38867303	38868594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38867300_38868600
ES.25887.8	chr5	+	293	1	Intergenic	novelGene_21547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGGATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38887309	38887602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_38887300_38887600
ES.25888.1	chr5	-	8548	4	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-4647	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.921650615832	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCTCTCATTTCGGACA	NA	False	NA	-1	True	AATAAA	-20	NA	38846816	38825824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38839827_38840126_38842021_38843173_38846089
ES.25888.10	chr5	-	6958	5	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.7398630133604	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842124	38825828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38835134_38835258_38839827_38840126_38840535_38840602_38842021
ES.25888.11	chr5	-	7978	3	NIC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	67	0	intron_retention	FALSE	canonical	3	25	junction_1	23.5	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842026	38825828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38832018_38839827_38840126_38840535
ES.25888.12	chr5	-	8244	3	ISM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-20	0	-13	0	intron_retention	FALSE	canonical	3	72	junction_2	106	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842113	38825828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38832197_38839827_38840126_38840535
ES.25888.13	chr5	-	9839	3	NNC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-4048	-2	intron_retention	FALSE	canonical	0	0	junction_2	142	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTGCTCTCTCATTT	NA	False	NA	-7	True	AATAAA	-14	NA	38846217	38825830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38839827_38843173_38846089
ES.25888.14	chr5	-	6062	4	NNC	ENSMUSG00000046572.11	novel	425	3	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.2852232487572	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTGCTCTCTCATTT	NA	False	NA	-7	True	AATAAA	-14	NA	38842103	38825830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38829663_38830167_38832018_38839827_38840126_38842021
ES.25888.15	chr5	-	6842	3	NNC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-4098	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	140.5	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTACTGCTCTCTCATTT	NA	False	NA	-7	True	AATAAA	-14	NA	38846267	38825830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38839827_38840126_38846089
ES.25888.16	chr5	-	6340	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	77	399	1	-397	multi-exon	FALSE	canonical	3	222	junction_2	31	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCCTCTGTCGCTTAA	NA	False	NA	NA	False	NA	NA	NA	38842092	38826225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.17	chr5	-	5578	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	50	1188	-19	-1186	multi-exon	FALSE	canonical	3	222	junction_2	31	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACAATGGTTTCATCT	NA	False	NA	NA	False	TATAAA	-40	NA	38842119	38827014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.18	chr5	-	5450	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	70	1296	1	-1294	multi-exon	FALSE	canonical	3	222	junction_2	31	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAATTGCAACAGCTAA	NA	False	NA	NA	False	NA	NA	NA	38842099	38827122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.19	chr5	-	4725	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-38	2117	-31	-2117	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGAAAGCAGGCTGTG	NA	False	NA	NA	False	ATTAAA	-34	NA	38842131	38827945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
ES.25888.2	chr5	-	8721	5	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-4755	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.161291216255	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTCTCATTTCGGAC	NA	False	NA	-2	True	AATAAA	-19	NA	38846924	38825825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021_38843173_38846089
ES.25888.20	chr5	-	4563	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	27	2226	27	-2224	multi-exon	FALSE	canonical	3	222	junction_2	31	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCTTTGCATCTAAT	NA	False	NA	NA	False	TATAAA	-6	NA	38842142	38828052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.21	chr5	-	4387	3	FSM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	-45	-3917	24	-2224	multi-exon	FALSE	canonical	3	25	junction_1	98.5	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCTTTGCATCTAAT	NA	False	NA	NA	False	TATAAA	-6	NA	38842145	38828052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832018_38839827_38840126_38842021
ES.25888.22	chr5	-	4038	2	NIC	ENSMUSG00000046572.11	novel	425	3	NA	NA	-1	-2224	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCTTTGCATCTAAT	NA	False	NA	NA	False	TATAAA	-6	NA	38842094	38828052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38832018_38842021
ES.25888.23	chr5	-	4585	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-7	2226	0	-2226	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTCCTTTGCATCTA	NA	False	NA	NA	False	TATAAA	-4	NA	38842100	38828054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
ES.25888.24	chr5	-	5998	3	ISM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-21	2247	-14	-2247	intron_retention	FALSE	canonical	3	72	junction_2	106	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATATATATATAAAAT	NA	False	NA	NA	False	GATAAA	-6	NA	38842114	38828075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38832197_38839827_38840126_38840535
ES.25888.25	chr5	-	4244	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	75	2497	-1	-2495	multi-exon	FALSE	canonical	3	222	junction_2	31	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGATGGGTCATCTTA	NA	False	NA	NA	False	AATAGA	-13	NA	38842094	38828323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.26	chr5	-	3996	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	97	2723	21	-2721	multi-exon	FALSE	canonical	3	222	junction_2	31	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTAATGTTCTCCACAG	NA	False	NA	NA	False	NA	NA	NA	38842072	38828549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.27	chr5	-	3841	3	FSM	ENSMUSG00000046572.11	ENSMUST00000180214.8	1124	3	67	-2784	-2	2784	multi-exon	FALSE	canonical	3	222	junction_2	31	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATTTTCTTCTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	38842102	38828734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38842021
ES.25888.28	chr5	-	578	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-46	6272	30	-131	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCTGCTGCTCCACCA	NA	False	NA	NA	False	ATTAAA	-12	NA	38842139	38832100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
ES.25888.29	chr5	-	3468	2	ISM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	-40	4807	29	-4807	5prime_fragment	FALSE	canonical	3	222	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAATCAATACAAGT	NA	False	NA	NA	False	NA	NA	NA	38842140	38836776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38840126_38842021
ES.25888.3	chr5	-	6718	5	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	107.80624981883	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTCTCATTTCGGAC	NA	False	NA	-2	True	AATAAA	-19	NA	38842114	38825825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832018_38832127_38832197_38839827_38840126_38840535_38840602_38842021
ES.25888.30	chr5	-	5492	1	Genic_Genomic	ENSMUSG00000046572.11	novel	NA	NA	NA	NA	-104	-4812	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGAAATCAATA	NA	False	NA	NA	False	NA	NA	NA	38842273	38836781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_38836800_38842300
ES.25888.31	chr5	-	4909	2	ISM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	-23	10969	-16	-4828	intron_retention	FALSE	canonical	3	72	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38842116	38836797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_38840126_38840535
ES.25888.4	chr5	-	5804	4	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.921650615832	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTCTCATTTCGGAC	NA	False	NA	-2	True	AATAAA	-19	NA	38842114	38825825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38828477_38829434_38832197_38839827_38840126_38842021
ES.25888.5	chr5	-	6819	4	NNC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	120.546901891154	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842088	38825826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38832197_38839827_38840126_38840535_38840620_38842021
ES.25888.6	chr5	-	4628	4	NNC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.921650615832	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842092	38825826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_38826986_38829096_38832197_38839827_38840126_38842021
ES.25888.7	chr5	-	6473	2	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842124	38825826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38832197_38842021
ES.25888.8	chr5	-	6589	3	FSM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	-22	-6142	-22	-1	multi-exon	FALSE	canonical	3	25	junction_1	98.5	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCTCTCTCATTTCGG	NA	False	NA	-4	True	AATAAA	-17	NA	38842122	38825827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_38832018_38839827_38840126_38842021
ES.25888.9	chr5	-	6661	4	NIC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	19.258475767539	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCTCTCTCATTTCGG	NA	False	NA	-4	True	AATAAA	-17	NA	38842128	38825827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_38832018_38839827_38840126_38840535_38840602_38842021
ES.25889.1	chr5	-	130	1	Intergenic	novelGene_21542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38850767	38850637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38850600_38850800
ES.2589.1	chr10	-	135	1	Intergenic	novelGene_1960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	28	False	NA	NA	False	NA	NA	NA	35711854	35711719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_35711700_35711900
ES.25890.1	chr5	-	1794	1	Intergenic	novelGene_21543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCTCCCTATGTTTGG	NA	False	NA	NA	False	NA	NA	NA	38859909	38858115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38858100_38859900
ES.25890.2	chr5	-	4599	1	Intergenic	novelGene_21544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGTGGTGCACGCCT	NA	False	NA	NA	False	NA	NA	NA	38862870	38858271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38858300_38862900
ES.25891.1	chr5	-	2988	1	Genic_Genomic	ENSMUSG00000039315.16	novel	NA	NA	NA	NA	167391	28	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAAAAGCTCAATTATG	9968	False	NA	NA	False	AATAAA	-16	NA	38866764	38863776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_38863800_38866800
ES.25892.1	chr5	-	156	1	Intergenic	novelGene_21546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAGTTAAA	4810	False	NA	NA	False	NA	NA	NA	38871922	38871766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_38871800_38871900
ES.25893.1	chr5	-	1689	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	-6	1	-6	-1	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTTGCTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	39801983	39771282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_39772748_39801759
ES.25894.1	chr5	+	4166	10	Antisense	novelGene_ENSMUSG00000051022.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	2.21665970480667	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGAGTGTGTTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	39831710	39865373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_39831882_39832132_39832207_39835168_39835365_39838915_39839029_39839286_39839331_39839792_39839961_39853855_39854017_39861092_39861157_39861408_39864014_39864803
ES.25895.1	chr5	-	193	1	Antisense	novelGene_ENSMUSG00000082938.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGGCTGTCCTGGA	NA	False	NA	NA	False	NA	NA	NA	40485785	40485592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_40485600_40485800
ES.25896.1	chr5	+	3371	4	Antisense	novelGene_ENSMUSG00000029128.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTCTCTTCAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	41788674	41856950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_41790592_41793146_41793253_41845063_41845196_41855734
ES.25896.2	chr5	+	173	1	Intergenic	novelGene_21548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAGAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41822651	41822824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_41822700_41822800
ES.25896.3	chr5	+	623	1	Intergenic	novelGene_21549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41844025	41844648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_41844000_41844600
ES.25897.1	chr5	+	1128	1	Intergenic	novelGene_21550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAGCA	NA	False	NA	NA	False	NA	NA	NA	41863130	41864258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_41863100_41864300
ES.25898.1	chr5	-	1369	7	NNC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	-2	15944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.545107044101	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGTGCATGCTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	41865502	41766374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41766991_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.12	chr5	-	1413	7	NNC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.545107044101	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865506	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41782981_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.13	chr5	-	8973	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-31	-5	intron_retention	FALSE	canonical	3	424	junction_2	49.6733328859661	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865531	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.14	chr5	-	1404	5	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	232.965662705902	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865506	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_41783206_41790515_41790594_41855732_41855822_41860780_41860878_41865247
ES.25898.17	chr5	-	581	4	ISM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	2	62728	2	-61477	5prime_fragment	FALSE	canonical	3	501	junction_1	31.5911379978626	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTGTAGTAAGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	41865495	41845046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.2	chr5	-	1124	4	NNC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	-28	15944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.030205278574	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGTGCATGCTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	41865528	41766374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41766991_41845063_41845194_41860780_41860878_41865247
ES.25898.3	chr5	-	1195	5	NNC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	-10	15944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.411676772059	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGTGCATGCTTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	41865510	41766374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41766991_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.4	chr5	-	1672	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	-32	-5	-29	5	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATTTTCATTTATTC	NA	False	NA	1	True	AATAAA	-19	NA	41865529	41782313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.5	chr5	-	1755	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	-56	-2	-20	2	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGATTTTCATTTA	NA	False	NA	-2	True	AATAAA	-16	NA	41865520	41782316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.6	chr5	-	966	8	NIC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	216.48471690413	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTGGGATTTTCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	41865506	41782317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_41782432_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.7	chr5	-	1668	8	NNC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	239.046148733858	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865497	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41783206_41790515_41790594_41793148_41793253_41804615_41804655_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25898.8	chr5	-	1539	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865496	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
ES.25898.9	chr5	-	1733	8	NNC	ENSMUSG00000029128.13	novel	1697	8	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	215.172640700723	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTTTTTTGGGATT	NA	False	NA	-10	True	AATAAA	-8	NA	41865497	41782324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41783206_41784329_41784434_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ES.25899.1	chr5	-	5089	1	Genic_Genomic	ENSMUSG00000061755.11	novel	NA	NA	NA	NA	35706	4290	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	41945679	41940590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_41940600_41945700
ES.25899.10	chr5	-	5484	18	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	4989	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_17	30.5603945698182	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAGTGACAAGAATTT	NA	False	NA	-2	True	TATAAA	-20	NA	41976396	41944882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550
ES.25899.11	chr5	-	3856	19	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	5343	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.7692296195121	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	-4	True	TATAAA	-18	NA	41976042	41944884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41973755_41974342_41974697_41975230
ES.25899.12	chr5	-	3833	17	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	5696	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	26.2865816530031	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	-4	True	TATAAA	-18	NA	41975689	41944884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41974342
ES.25899.13	chr5	-	10258	27	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	29.0521109031511	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	False	NA	-4	True	TATAAA	-18	NA	42001630	41944884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274_42001343_42001451
ES.25899.14	chr5	-	7022	17	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	3295	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	26.5483050306418	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTTGAGTGACAAGAA	NA	False	NA	-5	True	TATAAA	-17	NA	41978090	41944885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957147_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
ES.25899.15	chr5	-	4139	18	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	5592	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.3724005649736	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACTTGAGTGACAAGA	NA	False	NA	-6	True	TATAAA	-16	NA	41975793	41944886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955423_41957110_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41973755_41974342
ES.25899.16	chr5	-	10358	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	11	171	11	-171	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTTTTTTTATTGTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	42001647	41945051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.17	chr5	-	10206	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	21	172	-2	-172	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGGTTTTTTTATTGTT	NA	False	NA	-13	True	ATTAAA	-16	NA	42001637	41945052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.18	chr5	-	9426	24	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	-8533	-173	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_17	30.9078146375812	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGTTTTTTTATTGT	NA	False	NA	-14	True	ATTAAA	-15	NA	41989918	41945053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553
ES.25899.19	chr5	-	10118	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	51	-173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	30.8208760420595	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGTTTTTTTATTGT	NA	False	NA	-14	True	ATTAAA	-15	NA	42001584	41945053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991149_41995382_41995508_42001274
ES.25899.2	chr5	-	10367	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	27.7046133342445	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001617	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.20	chr5	-	6769	19	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	2936	-173	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	31.7756409537981	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGTTTTTTTATTGT	NA	False	NA	-14	True	ATTAAA	-15	NA	41978449	41945053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41973755_41974342
ES.25899.21	chr5	-	4062	19	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	5652	-173	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	34.7850542618522	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGTTTTTTTATTGT	NA	False	NA	-14	True	ATTAAA	-15	NA	41975733	41945053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41973755_41974342
ES.25899.22	chr5	-	5286	19	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	4445	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.6781126915942	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41976940	41945054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964004_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41973755_41974342
ES.25899.24	chr5	-	3435	16	ISM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	29001	174	8728	-174	3prime_fragment	FALSE	canonical	3	72	junction_1	12.8778880256042	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41972657	41945054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473
ES.25899.25	chr5	-	8318	23	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	-8359	-174	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	28.8859613018258	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41989744	41945054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41974342_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553
ES.25899.26	chr5	-	6405	18	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	3104	-174	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_17	32.6908556254267	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41978281	41945054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41974342
ES.25899.29	chr5	-	4539	17	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	5608	-175	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	26.5483050306418	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTAGGTTTTTTTATT	NA	False	NA	-16	True	ATTAAA	-13	NA	41975777	41945055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957147_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
ES.25899.3	chr5	-	10330	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	30.7780701149374	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001628	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988890_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.30	chr5	-	10234	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	30	276	7	-276	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGATCTGTTTCTTGCA	NA	False	NA	-117	True	CATAAA	-16	NA	42001628	41945156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.31	chr5	-	10072	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	11	-322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	29.1447147867328	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACTGTCTGACTTAAG	NA	False	NA	NA	False	TTTAAA	-22	NA	42001647	41945202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988781_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.32	chr5	-	9713	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	0	-672	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	27.7046133342445	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGACTCTGCTGCTTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	42001635	41945552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.33	chr5	-	9560	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	54	785	31	-785	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCATTAATAGAAGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	42001604	41945665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.34	chr5	-	9631	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	-9	-786	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	27.7046133342445	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAGTCATTAATAGAAGA	NA	False	NA	NA	False	AAAAAG	-16	NA	42001667	41945666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.35	chr5	-	9702	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	51	787	28	-787	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCAGTCATTAATAGAAG	NA	False	NA	NA	False	AAAAAG	-15	NA	42001607	41945667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.37	chr5	-	4651	17	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	4089	-793	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	26.2865816530031	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTATGCAGTCATTAA	NA	False	NA	NA	False	AAAAAG	-9	NA	41977296	41945673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41974342
ES.25899.38	chr5	-	8786	26	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	14	-793	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	29.1192307590705	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTATGCAGTCATTAA	NA	False	NA	NA	False	AAAAAG	-9	NA	42001621	41945673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41974342_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.39	chr5	-	3674	8	ISM	ENSMUSG00000061755.11	ENSMUST00000202200.2	3387	9	-12	2146	11	-2146	5prime_fragment	FALSE	canonical	3	41	junction_4	6.46813224152673	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTTTTATTTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	42001647	41982003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.4	chr5	-	10390	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	9	0	9	0	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001649	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.5	chr5	-	10565	25	NIC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	312	0	intron_retention	FALSE	canonical	3	41	junction_21	25.8786900213713	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001323	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_41946293_41951569_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.6	chr5	-	10529	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	11	0	11	0	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001647	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ES.25899.7	chr5	-	8692	23	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	-8559	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	28.8859613018258	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	41989944	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41974342_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553
ES.25899.8	chr5	-	8375	23	NNC	ENSMUSG00000061755.11	novel	10399	26	NA	NA	-7431	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_17	27.6062934494388	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	41988816	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41973755_41974342_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787
ES.25899.9	chr5	-	4883	19	NNC	ENSMUSG00000061755.11	novel	10540	27	NA	NA	5004	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	34.7850542618522	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	41976381	41944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971548_41973550_41973755_41974342
ES.259.1	chr1	+	168	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGGTTTCTCAG	NA	False	NA	NA	False	NA	NA	NA	36022261	36022429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36022300_36022400
ES.2590.1	chr10	-	177	1	Intergenic	novelGene_1961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTGCACTG	NA	False	NA	NA	False	NA	NA	NA	35868782	35868605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_35868600_35868800
ES.25900.1	chr5	+	176	1	Intergenic	novelGene_21551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAAGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	43314734	43314910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_43314700_43314900
ES.25901.1	chr5	-	207	1	Intergenic	novelGene_21552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGTTATGGGAAAGC	NA	False	NA	NA	False	AATAAA	-8	NA	43361365	43361158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_43361200_43361400
ES.25902.1	chr5	+	5900	13	NNC	ENSMUSG00000039782.16	novel	7139	12	NA	NA	-311	-1473	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	8.11719710792395	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATTATATAATAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	43390201	43445593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_43392432_43394649_43394813_43395669_43395760_43401928_43402020_43419076_43419128_43424098_43424141_43426211_43426236_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.2	chr5	+	3888	11	FSM	ENSMUSG00000039782.16	ENSMUST00000114065.9	7116	11	-306	3534	-306	-3533	multi-exon	FALSE	canonical	2	6	junction_3	4.68614980554399	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTATTTTTATATGT	NA	False	NA	NA	False	AATAAA	-19	NA	43390206	43443533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_43392432_43394649_43394932_43395669_43395760_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.3	chr5	+	7042	11	FSM	ENSMUSG00000039782.16	ENSMUST00000114065.9	7116	11	75	-1	75	1	multi-exon	FALSE	canonical	2	6	junction_3	4.68614980554399	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTAATCTTATTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	43390587	43447068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_43392432_43394649_43394932_43395669_43395760_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.4	chr5	+	5343	11	NNC	ENSMUSG00000039782.16	novel	7050	11	NA	NA	49	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.55438784326958	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTGTGTAATCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	43391318	43447064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_43391359_43392232_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.5	chr5	+	5685	10	NIC	ENSMUSG00000039782.16	novel	7139	12	NA	NA	-528	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	4.92160768674447	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGTAATCTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	43391852	43447066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.6	chr5	+	4823	8	ISM	ENSMUSG00000039782.16	ENSMUST00000114065.9	7116	11	11415	3	7270	-2	3prime_fragment	FALSE	canonical	3	13	junction_6	2.31234486517695	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCTGTGTAATCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	43401927	43447064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25902.7	chr5	+	7153	6	ISM	ENSMUSG00000039782.16	ENSMUST00000166713.9	7139	12	41790	0	37645	0	3prime_fragment	FALSE	canonical	3	13	junction_4	2.71293199325011	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGTAATCTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	43432302	43447066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ES.25903.1	chr5	-	1940	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	6	-1574	6	1574	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCACCTGTCTCCTTG	NA	False	NA	NA	False	NA	NA	NA	43512596	43508815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43510700_43512540
ES.25903.2	chr5	-	980	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	-32	-576	-32	576	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTAGCATCCTCTGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	43512634	43509813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43510700_43512540
ES.25904.1	chr5	+	172	1	Intergenic	novelGene_21553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATGGTAATAG	NA	False	NA	NA	False	NA	NA	NA	43710066	43710238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_43710100_43710200
ES.25905.1	chr5	+	5127	35	NIC	ENSMUSG00000039765.16	novel	4512	34	NA	NA	-142	8	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	5.72140097054418	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTCCTCGTGACACT	NA	False	NA	NA	False	AATAAA	-27	NA	43829488	43898322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ES.25905.2	chr5	+	4782	34	NNC	ENSMUSG00000039765.16	novel	4512	34	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.55232740414949	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTAGTCTGTCTCCTCG	NA	False	NA	NA	False	AATAAA	-20	NA	43829637	43898315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_43829747_43831033_43831158_43838651_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ES.25905.3	chr5	+	7904	33	ISM	ENSMUSG00000039765.16	ENSMUST00000125866.4	4512	34	7	-1656	7	1	intron_retention	FALSE	canonical	3	10	junction_9	5.3253521010352	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTAGTCTGTCTCCTCG	NA	False	NA	NA	False	AATAAA	-20	NA	43829637	43898315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837
ES.25905.4	chr5	+	4696	33	NIC	ENSMUSG00000039765.16	novel	4512	34	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	6.74536878161602	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	43829653	43898314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43894837_43894897_43896639_43896818_43898007
ES.25905.6	chr5	+	4908	22	NIC	ENSMUSG00000039765.16	novel	5484	40	NA	NA	6694	-4	intron_retention	FALSE	canonical	3	14	junction_1	5.31501957725237	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTTTTAGTCTGTCT	4482	False	NA	NA	False	AATAAA	-15	NA	43860617	43898310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ES.25905.7	chr5	+	4873	16	NIC	ENSMUSG00000039765.16	novel	5484	40	NA	NA	15848	0	intron_retention	FALSE	canonical	3	17	junction_8	4.72158165590021	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	937	False	NA	NA	False	AATAAA	-19	NA	43869771	43898314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_43869786_43871850_43871944_43873095_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ES.25906.1	chr5	-	9283	2	Antisense	novelGene_ENSMUSG00000039765.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAACAGCAT	NA	False	NA	NA	False	AGTAAA	-29	NA	43884002	43874232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_43877848_43878334
ES.25907.1	chr5	+	2718	1	Antisense	novelGene_ENSMUSG00000039753.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAGCTCACACACAACAT	NA	False	NA	NA	False	CATAAA	-9	NA	43930969	43933687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_43931000_43933700
ES.25908.1	chr5	-	2999	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	-140	-1	-140	0	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTGTTGTGATTTT	8688	False	NA	0	True	AATAAA	-29	NA	43939632	43901956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.10	chr5	-	2663	11	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	170.568021621874	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8865	False	NA	-3	True	AATAAA	-26	NA	43939455	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922806_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.12	chr5	-	5036	9	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	6	junction_4	188.545750416179	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8865	False	NA	-3	True	AATAAA	-26	NA	43939455	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43920158_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.13	chr5	-	2759	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	155.880543371047	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8829	False	NA	-3	True	AATAAA	-26	NA	43939491	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43915754_43915849_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.15	chr5	-	2099	10	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	179.883981814892	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8862	False	NA	-3	True	AATAAA	-26	NA	43939458	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43908203_43908353_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.17	chr5	-	2785	10	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	180.492399210713	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATATCTTTTGTGTTG	8812	False	NA	-7	True	AATAAA	-22	NA	43939508	43901963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43908203_43908353_43915563_43916287_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.18	chr5	-	2580	9	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	190.859077593915	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATATCTTTTGTGTTG	8868	False	NA	-7	True	AATAAA	-22	NA	43939452	43901963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43908203_43908353_43915563_43916287_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.19	chr5	-	2948	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	217.784486694136	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATATCTTTTGTGTTG	8862	False	NA	-7	True	AATAAA	-22	NA	43939458	43901963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43904870_43905001_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.2	chr5	-	8244	11	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	30	junction_2	162.957080238939	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8832	False	NA	-1	True	AATAAA	-28	NA	43939488	43901957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43908353_43915563_43915754_43915849_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.21	chr5	-	2910	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	217.436302062341	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCAATATCTTTTGTG	8866	False	NA	-10	True	AATAAA	-19	NA	43939454	43901966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43926069_43926169_43928078_43928175_43930785_43931002_43939306
ES.25908.25	chr5	-	2690	11	NNC	ENSMUSG00000039753.17	novel	2801	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	163.561150644033	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGCAATATCTTTTGT	8860	False	NA	-11	True	AATAAA	-18	NA	43939460	43901967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43930876_43939306
ES.25908.26	chr5	-	4635	10	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_3	236.53000749259	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAAGCAATATCTTTTGT	8868	False	NA	-11	True	AATAAA	-18	NA	43939452	43901967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43915754_43916143_43916287_43917084_43917168_43920158_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.27	chr5	-	6988	8	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	4	junction_1	199.88476271929	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAAGCAATATCTTTTG	8865	False	NA	-12	True	AATAAA	-17	NA	43939455	43901968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43915563_43916287_43917084_43917168_43918048_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.28	chr5	-	7092	11	NNC	ENSMUSG00000039753.17	novel	2306	10	NA	NA	-1	-815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.790017172128	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTGTGCATGATC	8875	False	NA	NA	False	AATGAA	-28	NA	43939445	43902780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43907822_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.29	chr5	-	2800	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	-559	65	-511	-65	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTGTGGAGGTAAG	8317	False	NA	NA	False	AATAAA	-45	NA	43940003	43908012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.3	chr5	-	10678	9	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	499	junction_2	35.8710799251988	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8860	False	NA	-1	True	AATAAA	-28	NA	43939460	43901957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.31	chr5	-	4613	9	NIC	ENSMUSG00000039753.17	novel	2306	10	NA	NA	-3	-69	intron_retention	FALSE	canonical	3	499	junction_2	35.8710799251988	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTACTTTGTGGAGG	8866	False	NA	NA	False	AATAAA	-41	NA	43939454	43908016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.32	chr5	-	4291	1	FSM	ENSMUSG00000104728.2	ENSMUST00000196543.2	1363	1	-714	-2214	-714	2214	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAAGCAAAATACAAC	NA	False	NA	NA	False	AATAAA	-21	NA	43912327	43908036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43908000_43912300
ES.25908.33	chr5	-	7224	9	FSM	ENSMUSG00000039753.17_ENSMUSG00000104728.2	ENSMUST00000087465.11	4237	9	9	-2996	-3	0	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATGACTGATACAGGC	8866	False	NA	NA	False	AATAAA	-12	NA	43939454	43910250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.34	chr5	-	3651	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	4	582	1	-582	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCCTGTTTGGGTGCC	8861	False	NA	NA	False	NA	NA	NA	43939459	43913828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.35	chr5	-	2141	8	NIC	ENSMUSG00000039753.17	novel	4237	9	NA	NA	8	62	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	200.424854868301	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCCATTCGTTGCT	8886	False	NA	NA	False	TATAAA	-15	NA	43939434	43915164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43916287_43917084_43917168_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.36	chr5	-	2311	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	6	1920	3	60	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGTGTCCATTCGTTG	8863	False	NA	NA	False	TATAAA	-13	NA	43939457	43915166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.37	chr5	-	2182	9	NNC	ENSMUSG00000039753.17	novel	4237	9	NA	NA	-3	60	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	180.300053729887	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGTGTCCATTCGTTG	8866	False	NA	NA	False	TATAAA	-13	NA	43939454	43915166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43930876_43939306
ES.25908.39	chr5	-	1986	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	1	2250	1	-270	multi-exon	FALSE	canonical	3	499	junction_1	35.8704265377483	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTCACTTGGCTTTT	8858	False	NA	NA	False	NA	NA	NA	43939462	43915496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.40	chr5	-	3543	5	FSM	ENSMUSG00000039753.17	ENSMUST00000124421.2	3833	5	6	284	-3	-284	multi-exon	FALSE	canonical	3	545	junction_1	26.3379479079142	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGGCTATTTTTGT	8866	False	NA	NA	False	ATTAAA	-14	NA	43939454	43919937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.5	chr5	-	5205	10	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	499	junction_3	33.9476721505974	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8847	False	NA	-1	True	AATAAA	-28	NA	43939473	43901957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.7	chr5	-	8328	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	-32	-5990	3	0	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8844	False	NA	-1	True	AATAAA	-28	NA	43939476	43901957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25908.8	chr5	-	10173	1	FSM	ENSMUSG00000104728.2	ENSMUST00000196543.2	1363	1	-519	-8291	-519	8291	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	43912132	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_43902000_43912100
ES.25908.9	chr5	-	2673	10	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	236.53000749259	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTTTTGTGTTGTGAT	8866	False	NA	-3	True	AATAAA	-26	NA	43939454	43901959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43920158_43920285_43922646_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ES.25909.1	chr5	+	1261	9	FSM	ENSMUSG00000029082.18	ENSMUST00000101237.8	2856	9	17	1578	17	-2	multi-exon	FALSE	canonical	3	10	junction_6	2.97647022494766	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCTGTATTTTTTATT	NA	False	NA	NA	False	ATTAAA	-12	NA	43976249	43999750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_43976436_43977819_43977947_43978951_43979088_43979608_43979692_43982669_43982747_43983605_43983699_43994802_43994890_43997772_43997833_43999338
ES.2591.1	chr10	+	256	1	Intergenic	novelGene_1962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCTTCTGCCCCACCAC	NA	False	NA	NA	False	NA	NA	NA	36110885	36111141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_36110900_36111100
ES.25910.1	chr5	-	1427	7	NNC	ENSMUSG00000039753.17	novel	2762	11	NA	NA	-43505	-39604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCACTAACTAGTAAGTA	NA	False	NA	NA	False	AATAAA	-11	NA	44022485	43965054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_43965699_43967113_43967196_43978882_43979205_43997312_43997414_44000732_44000772_44014312_44014369_44022302
ES.25910.2	chr5	-	5246	1	Intergenic	novelGene_21554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCGCCTGTATGTTTG	NA	False	NA	NA	False	NA	NA	NA	43991310	43986064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_43986100_43991300
ES.25910.3	chr5	-	3828	1	Intergenic	novelGene_21555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAACGGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	44013349	44009521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_44009500_44013300
ES.25911.1	chr5	+	5686	7	NIC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	-126	-193	intron_retention	FALSE	canonical	3	167	junction_3	16.6599986661331	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	14	True	AATAAA	-19	NA	44025768	44069524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.10	chr5	+	2917	8	NNC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	2	-199	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	65.4145337405213	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAAAGTATTTGCTTG	NA	False	NA	8	True	AATAAA	-13	NA	44026203	44069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063350_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.11	chr5	+	2829	9	NNC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	2	-193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	76.0262084744465	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	14	True	AATAAA	-19	NA	44026203	44069524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44066588_44066650_44067621
ES.25911.12	chr5	+	2748	8	NNC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	7	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.6645774728954	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAAAGTATTTGCTTG	NA	False	NA	8	True	AATAAA	-13	NA	44026208	44069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_44026463_44057674_44057805_44058762_44058890_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.2	chr5	+	3156	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	113	1	113	-1	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTGCTTGGATTCAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	44026007	44069716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.3	chr5	+	2910	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	167	193	-140	-193	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	14	True	AATAAA	-19	NA	44026061	44069524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.4	chr5	+	2807	8	NNC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	-50	-199	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	65.6110991108258	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAAAGTATTTGCTTG	NA	False	NA	8	True	AATAAA	-13	NA	44026151	44069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_44026463_44057681_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ES.25911.5	chr5	+	2737	7	NIC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	-47	-199	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	69.6578941845231	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAAAGTATTTGCTTG	NA	False	NA	8	True	AATAAA	-13	NA	44026154	44069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44064854_44064948_44065264_44065352_44067621
ES.25911.6	chr5	+	2724	7	NIC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	-47	-199	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	64.1733762725807	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAAAGTATTTGCTTG	NA	False	NA	8	True	AATAAA	-13	NA	44026154	44069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44067621
ES.25911.8	chr5	+	7847	5	NIC	ENSMUSG00000029084.6	novel	3270	8	NA	NA	-7	-193	intron_retention	FALSE	canonical	3	167	junction_3	8.68907359849138	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGCTTGGTTTAT	NA	False	NA	14	True	AATAAA	-19	NA	44026194	44069524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44063580_44064854
ES.25911.9	chr5	+	1139	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	309	1822	2	-1822	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCTCATGTGGTGCT	NA	False	NA	NA	False	CATAAA	-34	NA	44026203	44067895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ES.25912.1	chr5	+	775	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	6	-7	3	7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-43	NA	44070491	44071266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_44070500_44071300
ES.25913.1	chr5	-	228	1	Intergenic	novelGene_21556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGACTAGAGAGCTTGAG	9309	False	NA	NA	False	NA	NA	NA	44080239	44080011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_44080000_44080200
ES.25914.1	chr5	-	174	1	Intergenic	novelGene_21557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATATAGAAT	5929	False	NA	NA	False	NA	NA	NA	44088768	44088594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_44088600_44088800
ES.25915.1	chr5	-	1238	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	-80	3	-65	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCACTGTTTCCTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	44139186	44136204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44137311_44139054
ES.25915.2	chr5	-	1243	3	NNC	ENSMUSG00000048373.9	novel	1228	3	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATACCACTGTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	44139105	44136206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44137311_44137460_44137549_44139054
ES.25916.1	chr5	+	168	1	Intergenic	novelGene_21558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAAAGAAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	44167946	44168114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_44167900_44168100
ES.25917.1	chr5	-	3764	28	FSM	ENSMUSG00000029086.16	ENSMUST00000074113.13	3966	28	201	1	-72	-1	multi-exon	FALSE	canonical	2	5	junction_24	9.32068513939636	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTGTTTGGTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	44259095	44150962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ES.25917.10	chr5	-	3693	27	NIC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-28	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.8780219225163	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44259051	44150965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44151839_44152416_44152457_44158118_44158188_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ES.25917.11	chr5	-	5756	2	ISM	ENSMUSG00000029086.16	ENSMUST00000196378.5	1089	5	4962	2	4962	1	3prime_fragment	FALSE	canonical	3	43	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44157299	44150965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_44151839_44152416
ES.25917.12	chr5	-	3641	28	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-55	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.37463018449312	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44259078	44150965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151236_44151311_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.13	chr5	-	3712	27	NIC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	-27	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	8.49085829325946	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44259050	44150965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191665_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.15	chr5	-	3641	28	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4574387252022	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCTTTTGGTGTTTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	44259057	44150967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151236_44151311_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191665_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.16	chr5	-	3560	28	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.37463018449312	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGCTTTTGGTGTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	44259070	44150969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151463_44151607_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.17	chr5	-	3683	28	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	11.1389774018219	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGCTTTTGGTGTTTG	NA	False	NA	NA	False	AATAAA	-10	NA	44259015	44150969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186945_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ES.25917.18	chr5	-	3117	26	NNC	ENSMUSG00000029086.16	novel	3410	24	NA	NA	-9	1500	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	10.2593567049791	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCAACTAACAACTTGG	NA	False	NA	NA	False	AATAAA	-39	NA	44259032	44157121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44157486_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173988_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.19	chr5	-	2793	25	ISM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	-44	7155	-44	503	5prime_fragment	FALSE	canonical	3	24	junction_5	4.95237737522765	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCAAAGCCTGAAGTG	NA	False	NA	NA	False	CATAAA	-39	NA	44259067	44158118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.2	chr5	-	4134	27	FSM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	-469	-1	-118	-1	multi-exon	FALSE	canonical	3	24	junction_7	5.3433861125628	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTGTTTGGTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	44259492	44150962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.3	chr5	-	5598	25	NIC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	-43	-1	intron_retention	FALSE	canonical	2	3	junction_3	8.20907357068317	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTGTTTGGTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	44259066	44150962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44151839_44152416_44152457_44158118_44158188_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.4	chr5	-	3749	29	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-135	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.9404697134547	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44259158	44150964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151236_44151311_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ES.25917.5	chr5	-	3917	27	NNC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	173	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	8.53395584514379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44258850	44150964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258562
ES.25917.6	chr5	-	4544	31	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	-45488	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.1739542930934	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44304862	44150964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151839_44152416_44152457_44158118_44158188_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44263069_44263368_44266191_44266304_44275403_44275560_44288815_44288931_44290194_44290394_44304803
ES.25917.7	chr5	-	3701	26	NIC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	-62	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	8.13348633735866	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44259085	44150964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44151839_44152416_44152457_44158118_44158188_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25917.8	chr5	-	3821	28	NNC	ENSMUSG00000029086.16	novel	3966	28	NA	NA	193	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4736916478983	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGGTGTTTGGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	44258830	44150964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151236_44151311_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258562
ES.25917.9	chr5	-	3748	27	NNC	ENSMUSG00000029086.16	novel	3664	27	NA	NA	-51	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.15937765929377	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTGGTGTTTGGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	44259074	44150965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44151839_44152416_44152457_44158083_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ES.25918.1	chr5	+	4612	1	Intergenic	novelGene_21559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44321942	44326554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_44321900_44326600
ES.25919.1	chr5	+	4361	1	NIC	ENSMUSG00000104784.2	novel	987	2	NA	NA	222	-12379	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGGTTTGTGCCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	44384150	44388511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_44384200_44388500
ES.2592.1	chr10	-	199	1	Intergenic	novelGene_1963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTTAAAAGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	36416972	36416773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_36416800_36417000
ES.25920.1	chr5	-	3986	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-18	-455	-14	455	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGCATCTGCCTCACC	NA	False	NA	NA	False	AAAAAG	-16	NA	44383982	44332040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.10	chr5	-	3510	14	NNC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.4879586250245	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTCACTGAA	NA	False	NA	-10	True	AATAAA	-17	NA	44383980	44332510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343569_44343684_44345960_44346034_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.11	chr5	-	4913	12	NNC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	5	637	intron_retention	FALSE	canonical	0	0	junction_3	27.1140840472071	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATTAGCATCCCAGGAC	NA	False	NA	NA	False	GATAAA	-24	NA	44383954	44333200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_44334525_44336202_44336364_44340039_44342357_44343569_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.12	chr5	-	1450	2	FSM	ENSMUSG00000046985.12_ENSMUSG00000105519.2	ENSMUST00000196151.2	619	2	-18	-813	-18	813	multi-exon	FALSE	canonical	3	90	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGAAGCCAATTCTT	NA	False	NA	NA	False	AAAAAG	-40	NA	44383986	44374357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44375577_44383755
ES.25920.13	chr5	-	9589	1	FSM	ENSMUSG00000105519.2	ENSMUST00000198875.2	3459	1	-9378	3248	-9378	-3248	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AAAAAG	-7	NA	44383979	44374390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44374400_44384000
ES.25920.2	chr5	-	3925	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	-413	1	-409	-1	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATTTCTTGTGGCAAC	NA	False	NA	4	True	AATAAA	-31	NA	44384377	44332496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.3	chr5	-	5613	12	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	70	junction_1	12.1267411632173	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	0	True	AATAAA	-27	NA	44383958	44332500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44336364_44340039_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.4	chr5	-	3592	15	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	29.1194759147726	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	0	True	AATAAA	-27	NA	44383982	44332500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44356654_44356721_44361551_44361671_44375445_44375577_44383755
ES.25920.5	chr5	-	3379	13	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	24.4828454682503	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44383959	44332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44375445_44375577_44383755
ES.25920.6	chr5	-	5420	14	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-41	-5	intron_retention	FALSE	canonical	3	7	junction_10	30.2161836021575	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44384009	44332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44336364_44340039_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44356654_44356721_44361551_44361671_44375445_44375577_44383755
ES.25920.7	chr5	-	3400	13	FSM	ENSMUSG00000046985.12	ENSMUST00000199374.5	3372	13	-33	5	-24	-5	multi-exon	FALSE	canonical	1	3	junction_12	23.6447962327631	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44383992	44332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44383755
ES.25920.8	chr5	-	9003	12	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	70	junction_1	11.916375287813	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44383982	44332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25920.9	chr5	-	5319	13	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	70	junction_1	11.6213405231735	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	44383974	44332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_44334525_44336202_44336364_44340039_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ES.25921.1	chr5	+	168	1	Intergenic	novelGene_21560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTGTAAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	44437049	44437217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_44437000_44437200
ES.25922.1	chr5	-	1297	8	NNC	ENSMUSG00000015806.13	novel	1232	7	NA	NA	13	47773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	461.684758603238	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACCCCTCAGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	45607565	45543589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45543607_45591398_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ES.25922.10	chr5	-	1266	7	NNC	ENSMUSG00000015806.13	novel	1380	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	377.165193692808	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45607459	45591395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602092_45604917_45605011_45607348
ES.25922.11	chr5	-	1238	6	NNC	ENSMUSG00000015806.13	novel	1231	7	NA	NA	526	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	403.699690364013	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45604989	45591395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45592021_45595184_45595379_45596626_45596736_45600778_45600920_45601988_45602086_45604917
ES.25922.12	chr5	-	865	5	NNC	ENSMUSG00000015806.13	novel	446	5	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	406.251769226917	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45607570	45591395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45591813_45600883_45600920_45601988_45602086_45604917_45605011_45607348
ES.25922.13	chr5	-	5023	5	NIC	ENSMUSG00000015806.13	novel	1380	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	819	junction_3	97.3383274974457	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45607526	45591395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45592021_45595184_45596736_45600778_45600920_45601988_45602086_45604917
ES.25922.14	chr5	-	1294	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	-65	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTCTTTTTCAC	NA	False	NA	-22	True	AATAAA	-12	NA	45607578	45591397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ES.25922.2	chr5	-	3582	1	Intergenic	novelGene_21561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTTGATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	45586438	45582856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_45582900_45586400
ES.25922.3	chr5	-	2929	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	50	-1599	-10	1567	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGATCATGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	45607528	45589795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ES.25922.4	chr5	-	1399	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	0	-19	0	-6	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACTTACACATAG	NA	False	NA	0	True	AATAAA	-34	NA	45607578	45591375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ES.25922.5	chr5	-	3709	6	ISM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	11	-2	11	2	intron_retention	FALSE	canonical	3	819	junction_4	96.2330504556517	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTTTTTCACTCAAG	NA	False	NA	-17	True	AATAAA	-17	NA	45607567	45591392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917
ES.25922.6	chr5	-	1450	7	FSM	ENSMUSG00000015806.13	ENSMUST00000120867.8	1234	7	-215	-1	-4	1	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTCTTTTTCACTCAA	NA	False	NA	-18	True	AATAAA	-16	NA	45607522	45591393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607223
ES.25922.7	chr5	-	667	3	NNC	ENSMUSG00000015806.13	novel	1232	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607519	45591394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45591926_45604962_45605011_45607431
ES.25922.8	chr5	-	2328	8	NNC	ENSMUSG00000015806.13	novel	1380	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	461.684758603238	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607574	45591394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45605933_45605985_45606447
ES.25922.9	chr5	-	2448	6	NIC	ENSMUSG00000015806.13	novel	1380	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	910	junction_5	61.4732462132918	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTTTTTCACTC	NA	False	NA	-20	True	AATAAA	-14	NA	45607578	45591395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45602086_45604917_45605011_45607348
ES.25923.1	chr5	+	2306	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	-55	16	-55	-16	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCACTGTGATTC	NA	False	NA	19	True	AATAAA	-18	NA	45650660	45670017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.10	chr5	+	2870	12	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	45	-536	intron_retention	FALSE	canonical	3	2266	junction_5	189.983644359105	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45650760	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.11	chr5	+	1666	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	48	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	744.845635573797	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45650763	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660738_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.12	chr5	+	1361	10	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	49	-536	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	837.66965114205	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45650764	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.14	chr5	+	5850	11	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	53	-532	intron_retention	FALSE	non_canonical	0	0	junction_5	809.572016561837	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTGTTCTTTTTTTT	NA	False	NA	17	True	ACTAAA	-2	NA	45650768	45669501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45657326_45657476_45657910_45660721_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.15	chr5	+	2857	12	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	55	18	55	-18	intron_retention	FALSE	canonical	3	2266	junction_5	151.983470175581	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45650770	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449
ES.25923.16	chr5	+	7931	9	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	56	-18	intron_retention	FALSE	canonical	3	2266	junction_4	204.368998382827	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45650771	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45663605_45664448_45664552_45666779_45668560_45669222
ES.25923.17	chr5	+	2041	15	Fusion	ENSMUSG00000039682.13_ENSMUSG00000015804.15	novel	2267	13	NA	NA	56	2	multi-exon	FALSE	non_canonical	0	0	junction_12	699.697766386112	1320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTGTATTCATCTTT	NA	False	NA	31	True	AGTAAA	-20	NA	45650771	45682949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45679771_45679845_45680763_45680877_45682494
ES.25923.18	chr5	+	5675	11	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	56	-532	intron_retention	FALSE	canonical	3	2266	junction_5	186.164013708343	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTGTTCTTTTTTTT	NA	False	NA	17	True	ACTAAA	-2	NA	45650771	45669501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.19	chr5	+	4038	11	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	56	-20	intron_retention	FALSE	canonical	3	2266	junction_5	159.318203605238	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTTTGTTCACTGTG	NA	False	NA	15	True	AATAAA	-14	NA	45650771	45670013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449
ES.25923.2	chr5	+	1900	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	-37	404	-37	-404	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAGCCATATTTACTA	NA	False	NA	18	True	ATTAAA	-21	NA	45650678	45669629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.22	chr5	+	6136	7	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	57	3909	57	-2591	intron_retention	FALSE	canonical	3	2266	junction_5	188.676089281781	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45650772	45666124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721
ES.25923.24	chr5	+	1597	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	58	612	58	-612	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTACTCCATCTGTCTTG	NA	False	NA	8	True	AGTAAA	-22	NA	45650773	45669421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.25	chr5	+	1791	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	59	-415	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	743.40236506813	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATGCATTTTCAAGC	NA	False	NA	7	True	ATTAAA	-10	NA	45650774	45669618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663609_45664454_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.26	chr5	+	2456	12	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	59	415	59	-415	intron_retention	FALSE	canonical	3	2266	junction_5	151.983470175581	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATGCATTTTCAAGC	NA	False	NA	7	True	ATTAAA	-10	NA	45650774	45669618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449
ES.25923.27	chr5	+	2977	12	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	59	-415	intron_retention	FALSE	canonical	3	2266	junction_5	189.983644359105	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATGCATTTTCAAGC	NA	False	NA	7	True	ATTAAA	-10	NA	45650774	45669618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.28	chr5	+	6186	11	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	59	-18	intron_retention	FALSE	canonical	3	2266	junction_5	186.164013708343	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45650774	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.29	chr5	+	5909	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	63	-536	intron_retention	FALSE	non_canonical	0	0	junction_5	999.622800388004	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45650778	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655820_45656048_45657326_45657476_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.3	chr5	+	1797	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	-36	506	-36	-506	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTGGAATACTTTAAT	NA	False	NA	43	True	ACTAAA	-28	NA	45650679	45669527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.30	chr5	+	6632	12	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-59	-34	intron_retention	FALSE	non_canonical	0	0	junction_5	776.746690683393	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCCTTCTGTTAGTT	NA	False	NA	1	True	AGTAAA	-4	NA	45650786	45669999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45657326_45657476_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.33	chr5	+	1992	15	Fusion	ENSMUSG00000039682.13_ENSMUSG00000015804.15	novel	2267	13	NA	NA	-19	14	multi-exon	FALSE	canonical	3	45	junction_12	689.258030532152	1320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTTAGCACTGTTTAC	NA	False	NA	43	True	AGTAAA	-32	NA	45650826	45682961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45679777_45679845_45680763_45680877_45682494
ES.25923.35	chr5	+	1610	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-19	-537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	725.209778079572	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGAATGTTGTTCTTT	NA	False	NA	12	True	AATGAA	-19	NA	45650826	45669496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668551_45669222
ES.25923.39	chr5	+	4556	12	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-12	-405	intron_retention	FALSE	canonical	3	2266	junction_5	178.791304538315	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAAGCCATATTTACT	NA	False	NA	17	True	ATTAAA	-20	NA	45650833	45669628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.42	chr5	+	3314	12	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-12	-19	intron_retention	FALSE	canonical	3	2266	junction_5	189.983644359105	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTTGTTCACTGTGA	NA	False	NA	16	True	AATAAA	-15	NA	45650833	45670014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.43	chr5	+	3936	12	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	-12	-22	intron_retention	FALSE	canonical	3	2394	junction_5	158.165255141211	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTGTTTGTTCACTG	NA	False	NA	13	True	AATAAA	-12	NA	45650833	45670011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.44	chr5	+	2425	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	41	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	743.999043271488	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45650908	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651273_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.45	chr5	+	2344	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	512	-18	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	734.083593483891	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45651379	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.46	chr5	+	1953	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	516	-405	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	734.083593483891	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAAGCCATATTTACT	NA	False	NA	17	True	ATTAAA	-20	NA	45651383	45669628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.47	chr5	+	3466	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	526	-540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	990.184564726305	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAAATGAATGTTGTTC	NA	False	NA	9	True	AATGAA	-16	NA	45651393	45669493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45657326_45657476_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.48	chr5	+	1804	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	534	-536	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	734.083593483891	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45651401	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.49	chr5	+	4095	9	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	534	-2592	intron_retention	FALSE	canonical	2	37	junction_1	847.42743052134	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAGAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45651401	45666123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45662190_45663515_45663605_45664448
ES.25923.50	chr5	+	1878	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	1138	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	743.999043271488	1059	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45652005	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45652341_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.51	chr5	+	2063	12	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	1790	18	1638	-18	3prime_fragment	FALSE	canonical	3	2266	junction_4	188.856279257207	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTGTTCACTGTGAT	NA	False	NA	17	True	AATAAA	-16	NA	45652505	45670015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.52	chr5	+	1519	10	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	3808	536	-1048	-536	3prime_fragment	FALSE	canonical	3	2266	junction_2	190.190417901976	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATGTTGTTCTTTT	NA	False	NA	13	True	AATGAA	-20	NA	45654523	45669497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.53	chr5	+	1267	9	ISM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	5058	537	202	-537	3prime_fragment	FALSE	canonical	3	2266	junction_1	196.402926085637	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGAATGTTGTTCTTT	NA	False	NA	12	True	AATGAA	-19	NA	45655773	45669496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.54	chr5	+	6195	2	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	892	-2622	intron_retention	FALSE	canonical	3	2639	junction_1	0	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45658572	45666093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45662190_45663515
ES.25923.55	chr5	+	6950	1	NIC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	1498	-2587	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1038	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAAAAAAATG	534	False	NA	NA	False	NA	NA	NA	45659178	45666128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45659200_45666100
ES.25923.56	chr5	+	3942	3	FSM	ENSMUSG00000015804.15	ENSMUST00000139586.3	512	3	-3000	-430	-1099	3	multi-exon	FALSE	canonical	3	1736	junction_2	61.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGTATTCATCTTTA	6233	False	NA	32	True	AGTAAA	-21	NA	45676471	45682950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45679845_45680763_45680877_45682494
ES.25923.57	chr5	+	859	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	42	3659	-24	12	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATCTTTAGCACTGTTT	7374	False	NA	41	True	AGTAAA	-30	NA	45677612	45682959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ES.25923.58	chr5	+	2180	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	88	2292	14	1347	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTTGTCAATAATGAGG	7420	False	NA	NA	False	AATAAA	-16	NA	45677658	45684326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ES.25923.6	chr5	+	3391	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	19	-1143	19	1143	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAATAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45650734	45671176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ES.25923.60	chr5	+	1047	5	NNC	ENSMUSG00000015804.15	novel	4560	4	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	942.181610678111	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTGTATTC	7421	False	NA	25	True	AGTAAA	-14	NA	45677659	45682943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45677827_45679777_45679845_45680763_45680877_45681925_45682177_45682494
ES.25923.61	chr5	+	6610	4	FSM	ENSMUSG00000105745.2_ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	90	-2140	16	-1695	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	7422	False	NA	NA	False	NA	NA	NA	45677660	45688758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ES.25923.62	chr5	+	616	2	FSM	ENSMUSG00000015804.15	ENSMUST00000119579.3	636	2	25	-5	17	-2	multi-exon	FALSE	canonical	3	39	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTGTTTGTATTCAT	7423	False	NA	27	True	AGTAAA	-16	NA	45677661	45682945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45677827_45682494
ES.25923.7	chr5	+	2208	13	NNC	ENSMUSG00000039682.13	novel	2267	13	NA	NA	32	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	739.320333519616	1063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTTGTTCACTGTGA	NA	False	NA	16	True	AATAAA	-15	NA	45650747	45670014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664544_45666779_45666860_45668449_45668560_45669222
ES.25924.1	chr5	-	2348	1	Antisense	novelGene_ENSMUSG00000039682.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCTGAAAAAAAAAAAAAATC	NA	False	NA	NA	False	CATAAA	-16	NA	45654856	45652508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_45652500_45654900
ES.25925.1	chr5	-	5029	1	Antisense	novelGene_ENSMUSG00000015804.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCTAACTGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	45683781	45678752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_45678800_45683800
ES.25925.2	chr5	-	3787	2	Antisense	novelGene_ENSMUSG00000015804.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCTAACTGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	45684157	45678752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_45680875_45682492
ES.25925.3	chr5	-	2407	1	Antisense	novelGene_ENSMUSG00000015804.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCTTGCCTGGAACTTG	NA	False	NA	NA	False	NA	NA	NA	45683785	45681378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_45681400_45683800
ES.25926.2	chr5	-	4347	17	NNC	ENSMUSG00000015879.9	novel	4236	16	NA	NA	-13121	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1.66653645324667	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACCACCTGTCTTATTA	NA	False	NA	NA	False	AATAAA	-40	NA	45810077	45687048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45688173_45689099_45689300_45690072_45690178_45691494_45691613_45694930_45695078_45696997_45697153_45698183_45698348_45699568_45699708_45710421_45710552_45712439_45712532_45730545_45730657_45737865_45738070_45738854_45738983_45740142_45740279_45741323_45742083_45796434_45796892_45809899
ES.25926.3	chr5	-	3045	3	ISM	ENSMUSG00000015879.9	ENSMUST00000016023.9	4236	16	105146	19	2074	-19	intron_retention	FALSE	canonical	2	3	junction_1	1	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGCCTCCACACTAC	NA	False	NA	NA	False	AATAAA	-23	NA	45691810	45687065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45688173_45689099_45689300_45690072
ES.25926.4	chr5	-	2304	8	ISM	ENSMUSG00000015879.9	ENSMUST00000016023.9	4236	16	206	22947	206	-22947	5prime_fragment	FALSE	canonical	0	0	junction_6	0.755928946018454	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCATTTGATATTAT	9931	False	NA	NA	False	NA	NA	NA	45796750	45709993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45710552_45712439_45712532_45730545_45730657_45737865_45738070_45738854_45738983_45740142_45740279_45741323_45742083_45796434
ES.25927.1	chr5	+	4651	1	FSM	ENSMUSG00000104665.2	ENSMUST00000199829.2	2655	1	-1414	-582	-1414	582	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGGTGTTGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	45815994	45820645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45816000_45820600
ES.25927.2	chr5	+	3966	1	FSM	ENSMUSG00000104665.2	ENSMUST00000199829.2	2655	1	-1317	6	-1317	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTATGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45816091	45820057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45816100_45820100
ES.25928.1	chr5	-	973	1	FSM	ENSMUSG00000104986.2	ENSMUST00000196242.2	1007	1	34	0	34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTGTGTGTGTCAT	5136	False	NA	NA	False	AATAAA	-32	NA	45827016	45826043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45826000_45827000
ES.25929.1	chr5	+	3400	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-111	414	-111	5	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCAGTATTTATTTGAT	NA	False	NA	23	True	ATTAAA	-30	NA	45827149	45857474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.10	chr5	+	3839	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-33	-201	intron_retention	FALSE	canonical	3	453	junction_14	44.6156252519283	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTATGTACTGATTTA	NA	False	NA	NA	False	AATAAA	-34	NA	45827227	45857687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.11	chr5	+	3828	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-32	-7	intron_retention	FALSE	canonical	0	0	junction_15	154.474075494887	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827228	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45851269_45852002_45852109_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.12	chr5	+	2955	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-32	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	120.885276191933	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827228	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.13	chr5	+	5611	18	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-31	-4	intron_retention	FALSE	canonical	0	0	junction_7	193.729112056323	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827229	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834023_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45851546_45851644_45852995_45853887_45856182_45856253_45857189
ES.25929.14	chr5	+	3227	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-31	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	121.970365593871	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827229	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.15	chr5	+	3170	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-31	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	122.159470726132	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827229	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.16	chr5	+	3727	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-27	3	-27	-3	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTAACAGTTGTTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	45827233	45857885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.17	chr5	+	3315	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.981878872373	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTCCTATACTCAGTA	NA	False	NA	13	True	ATTAAA	-20	NA	45827233	45857464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853805_45853887_45856182_45856253_45857189
ES.25929.18	chr5	+	8121	16	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	458	junction_5	44.507177947932	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827233	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.19	chr5	+	3288	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.071334370371	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827233	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828377_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.2	chr5	+	7565	16	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-70	-199	intron_retention	FALSE	canonical	3	458	junction_5	36.021228308997	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATGTACTGATTTATG	NA	False	NA	NA	False	AATAAA	-36	NA	45827190	45857689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45853887_45856182_45856253_45857189
ES.25929.22	chr5	+	3246	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	119.06720791217	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCAGACTCCTTATTT	NA	False	NA	15	True	GATAAA	-45	NA	45827240	45857417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837195_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.23	chr5	+	3313	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	158.631018404346	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827240	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833278_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856181_45856253_45857189
ES.25929.24	chr5	+	5148	18	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-20	-7	intron_retention	FALSE	canonical	3	458	junction_5	42.9993160000318	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827240	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.25	chr5	+	5154	18	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-20	5	intron_retention	FALSE	canonical	3	458	junction_4	44.791636021019	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGACTCCTTATTTACA	NA	False	NA	18	True	NA	NA	NA	45827240	45857420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.26	chr5	+	4631	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	458	junction_5	42.7098696320759	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827240	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.28	chr5	+	1735	8	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-12	-4	intron_retention	TRUE	canonical	0	0	junction_5	186.949081794144	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827248	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45853388_45853887_45856182_45856253_45857189
ES.25929.3	chr5	+	3364	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-70	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.981878872373	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827190	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853798_45853887_45856182_45856253_45857189
ES.25929.30	chr5	+	4823	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-7	592	intron_retention	FALSE	canonical	3	453	junction_14	43.6456338941788	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45827253	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.31	chr5	+	5330	18	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	458	junction_5	44.5449114372012	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827255	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.32	chr5	+	3397	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	157.078451736704	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCATCATTCCTATAC	NA	False	NA	7	True	ATTAAA	-14	NA	45827257	45857458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827581_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856166_45856253_45857189
ES.25929.33	chr5	+	3545	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	-4	intron_retention	FALSE	canonical	3	453	junction_13	44.2340789393448	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827260	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.34	chr5	+	4915	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	-3	intron_retention	FALSE	canonical	3	458	junction_5	43.8489269545074	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827260	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.35	chr5	+	3892	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	1	-190	1	190	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGGCTCTATGTCTT	NA	False	NA	NA	False	AATGAA	-15	NA	45827261	45858078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.36	chr5	+	2957	14	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	1	-4350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	134.257281930923	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTCTTTCTGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	45827261	45849922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833936_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943
ES.25929.38	chr5	+	2944	6	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2	22531	2	-2011	intron_retention	FALSE	canonical	3	458	junction_5	35.9922213818486	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACACATTCTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	45827262	45835357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290
ES.25929.39	chr5	+	6856	17	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	-4	intron_retention	FALSE	canonical	3	458	junction_5	36.2443422308917	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827262	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45853887_45856182_45856253_45857189
ES.25929.4	chr5	+	3408	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-69	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	117.867923965768	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTCCTTATTTAC	NA	False	NA	17	True	NA	NA	NA	45827191	45857419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827581_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.40	chr5	+	7915	21	FSM	ENSMUSG00000015880.14_ENSMUSG00000104342.2	ENSMUST00000117396.3	3703	21	2	-4214	2	0	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGCCATGATTCTCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	45827262	45862102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.41	chr5	+	4286	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	119.071522624009	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45827262	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834087_45835698_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.43	chr5	+	3224	11	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	2	17165	2	3355	5prime_fragment	FALSE	canonical	3	458	junction_5	29.7323056623599	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAATCTTTGACCAA	NA	False	NA	NA	False	AATAAA	-14	NA	45827262	45840723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068
ES.25929.44	chr5	+	5022	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	-3	intron_retention	FALSE	canonical	3	458	junction_5	43.3083973837709	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827262	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.45	chr5	+	3248	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	119.071522624009	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827262	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844757_45845922_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.46	chr5	+	8219	20	Fusion	ENSMUSG00000015880.14_ENSMUSG00000104342.2	novel	3703	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	453	junction_14	44.6156252519283	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGCCATGATTCTCTC	NA	False	NA	NA	False	ATTAAA	-23	NA	45827262	45862102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.48	chr5	+	3497	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.981878872373	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTCCTAGGAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	45827262	45857667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853797_45853887_45856182_45856253_45857189
ES.25929.5	chr5	+	3651	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-66	-3	intron_retention	FALSE	canonical	3	453	junction_14	44.6156252519283	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827194	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.50	chr5	+	3321	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	118.981878872373	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827262	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853772_45853887_45856182_45856253_45857189
ES.25929.51	chr5	+	7046	17	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	5	-7	intron_retention	FALSE	canonical	3	458	junction_5	38.4365853549714	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827265	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45853158_45853374_45853887_45856182_45856253_45857189
ES.25929.52	chr5	+	1965	12	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	6	13015	6	7505	5prime_fragment	FALSE	canonical	3	458	junction_5	30.559791007896	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGATAAATACAGTGAACT	NA	False	NA	NA	False	ATTAAA	-19	NA	45827266	45844873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653
ES.25929.53	chr5	+	3793	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	6	-6	intron_retention	FALSE	canonical	3	453	junction_14	43.6456338941788	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827266	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.54	chr5	+	3327	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	118.981878872373	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827266	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853762_45853887_45856182_45856253_45857189
ES.25929.56	chr5	+	3305	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	118.94262272205	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827268	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837347_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.57	chr5	+	3293	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	156.441043207977	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45827268	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832112_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853352_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.58	chr5	+	5533	17	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	8	-7	intron_retention	FALSE	canonical	3	458	junction_5	43.5488231758333	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827268	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.6	chr5	+	5453	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-60	1169	intron_retention	FALSE	canonical	3	453	junction_14	43.6456338941788	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTAATATAAAGACAGAT	NA	False	NA	NA	False	ACTAAA	-16	NA	45827200	45859057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.60	chr5	+	6538	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	9	206	intron_retention	FALSE	canonical	3	458	junction_5	37.1920690470428	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGGAAGTAATCTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	45827269	45857675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.61	chr5	+	3271	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	118.76611469607	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827269	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853894_45856189_45856253_45857189
ES.25929.62	chr5	+	1383	8	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	10	-2011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	175.675721668287	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACACATTCTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	45827270	45835357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835186
ES.25929.64	chr5	+	7065	15	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	15	-201	intron_retention	FALSE	canonical	3	458	junction_3	45.2397242814457	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTATGTACTGATTTA	NA	False	NA	NA	False	AATAAA	-34	NA	45827275	45857687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45829844_45831699_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.65	chr5	+	4728	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	15	-7	intron_retention	FALSE	canonical	1	1	junction_16	155.262326402769	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCATTCCTATACTCAG	NA	False	NA	11	True	ATTAAA	-18	NA	45827275	45857462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45851835_45851972_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.66	chr5	+	3177	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	119.064887771332	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTCCTATACTCAGTA	NA	False	NA	13	True	ATTAAA	-20	NA	45827275	45857464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45845936_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.67	chr5	+	3226	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.069087088127	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827278	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831735_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.68	chr5	+	3259	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	118.76611469607	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827279	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853892_45856189_45856253_45857189
ES.25929.7	chr5	+	4365	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-59	-603	-59	603	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTGTGTGTGTGT	NA	False	NA	6	True	AATACA	-29	NA	45827201	45858491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.71	chr5	+	4671	20	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	50	-6	intron_retention	FALSE	canonical	2	3	junction_17	121.244584652178	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827310	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853701_45853887_45856182_45856253_45857189
ES.25929.74	chr5	+	3267	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	94	-6	intron_retention	FALSE	canonical	0	0	junction_13	123.989309077162	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827354	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.75	chr5	+	4149	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	139	592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	118.76611469607	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45827399	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856189_45856253_45857189
ES.25929.76	chr5	+	5561	21	NNC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	191	600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	115.675580828453	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTTTGGTGTGTGTGTG	NA	False	NA	3	True	AATACA	-26	NA	45827451	45858488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45851546_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.77	chr5	+	2777	19	NNC	ENSMUSG00000015880.14	novel	3975	14	NA	NA	249	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	160.845499443901	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827509	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827581_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.78	chr5	+	4146	21	NNC	ENSMUSG00000015880.14	novel	3975	14	NA	NA	254	592	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	117.867923965768	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45827514	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827581_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.79	chr5	+	3283	21	NNC	ENSMUSG00000015880.14	novel	3975	14	NA	NA	254	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.071334370371	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45827514	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827733_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.8	chr5	+	4928	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-49	-1176	-49	1176	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGACAGATCACTGGA	NA	False	NA	NA	False	ACTAAA	-23	NA	45827211	45859064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.80	chr5	+	4438	20	NNC	ENSMUSG00000015880.14	novel	3975	14	NA	NA	275	-6	intron_retention	FALSE	canonical	1	1	junction_1	120.757213901039	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTCCTATACTCAGT	NA	False	NA	12	True	ATTAAA	-19	NA	45827535	45857463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_45827581_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.81	chr5	+	3959	17	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-1656	-8	intron_retention	FALSE	canonical	3	458	junction_2	43.8505986276128	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATCATTCCTATACTCA	NA	False	NA	10	True	ATTAAA	-17	NA	45831698	45857461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.82	chr5	+	3250	12	NIC	ENSMUSG00000015880.14	novel	2440	14	NA	NA	1931	-3	intron_retention	FALSE	canonical	3	466	junction_2	43.3158684873098	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCCTATACTCAGTATT	NA	False	NA	15	True	ATTAAA	-22	NA	45837187	45857466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.83	chr5	+	1919	13	ISM	ENSMUSG00000015880.14	ENSMUST00000198274.2	2440	14	1931	-50	1931	-4	3prime_fragment	FALSE	canonical	3	453	junction_6	46.1302503786832	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45837187	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.84	chr5	+	2546	10	ISM	ENSMUSG00000015880.14	ENSMUST00000198274.2	2440	14	9395	-1065	-4740	592	3prime_fragment	FALSE	canonical	3	453	junction_3	49.4795131566815	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45844651	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.85	chr5	+	4847	3	NIC	ENSMUSG00000015880.14	novel	3975	14	NA	NA	-13	-11	intron_retention	FALSE	canonical	3	521	junction_1	32.5	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCATCATTCCTATAC	NA	False	NA	7	True	ATTAAA	-14	NA	45849378	45857458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45853887_45856182_45856253_45857189
ES.25929.86	chr5	+	7356	4	Fusion	ENSMUSG00000015880.14_ENSMUSG00000104342.2	novel	3975	14	NA	NA	394	-1	intron_retention	FALSE	canonical	3	521	junction_2	36.6090456338624	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGCCATGATTCTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	45849785	45862101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_45851269_45852995_45853887_45856182_45856253_45857189
ES.25929.87	chr5	+	3265	2	FSM	ENSMUSG00000015880.14	ENSMUST00000123396.2	468	2	-2745	-52	-2745	-5	multi-exon	FALSE	canonical	3	586	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTCCTATACTCAGTA	NA	False	NA	13	True	ATTAAA	-20	NA	45853262	45857464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45856253_45857189
ES.25929.88	chr5	+	1571	4	ISM	ENSMUSG00000015880.14	ENSMUST00000198274.2	2440	14	18116	-1065	-2635	592	3prime_fragment	FALSE	canonical	3	504	junction_1	35.3364778474973	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATAACCTTTGGTG	NA	False	NA	-5	True	AATACA	-18	NA	45853372	45858480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.89	chr5	+	2979	1	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-2162	-588	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTGTTTGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	45853845	45856824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45853800_45856800
ES.25929.9	chr5	+	3546	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	-42	199	-42	-199	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATGTACTGATTTATG	NA	False	NA	NA	False	AATAAA	-36	NA	45827218	45857689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ES.25929.90	chr5	+	2190	1	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	-732	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCCTATACTCAGTAT	NA	False	NA	14	True	ATTAAA	-21	NA	45855275	45857465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_45855300_45857500
ES.2593.1	chr10	+	175	1	Intergenic	novelGene_1964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	36535577	36535752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_36535600_36535800
ES.25930.1	chr5	+	774	1	Intergenic	novelGene_21563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTCTTACTCTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	45980023	45980797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_45980000_45980800
ES.25931.1	chr5	+	7447	1	Intergenic	novelGene_21564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAATGAATCAGCGGAG	NA	False	NA	NA	False	NA	NA	NA	46004580	46012027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_46004600_46012000
ES.25932.1	chr5	-	5676	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	89	-57	-13	57	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTACTGTTGGATACCC	NA	False	NA	53	True	ATTAAA	-21	NA	46014868	45854465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.10	chr5	-	5448	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	137	123	3	-120	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGACTATTAGTGT	NA	False	NA	-127	True	ATTAAA	-15	NA	46014820	45854645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.11	chr5	-	3818	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	120	1770	6	1499	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCATCTTCTGTCT	NA	False	NA	NA	False	AAGAAA	-36	NA	46014837	45856292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.12	chr5	-	7787	8	FSM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	115	2575	1	694	multi-exon	FALSE	canonical	3	6	junction_1	27.9175169938525	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTAATAGCCTGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	46014842	45857097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45880315_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.13	chr5	-	2755	6	NIC	ENSMUSG00000015882.19	novel	5708	7	NA	NA	6	692	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.3354578010618	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGTGTAATAGCCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	46014837	45857099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45893072_45893167_45932733_45932864_45933761_45933842_45952634_45952701_46014692
ES.25932.14	chr5	-	3030	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	100	2578	-2	691	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTGTGTAATAGCCTG	NA	False	NA	NA	False	AATAAA	-22	NA	46014857	45857100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.15	chr5	-	2920	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-36	2579	-2	687	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAATATTGTGTAATAG	NA	False	NA	NA	False	AATAAA	-18	NA	46014845	45857104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.16	chr5	-	7089	8	FSM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	118	3270	4	-1	multi-exon	FALSE	canonical	3	6	junction_1	27.9175169938525	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAAAGGGACTACTT	NA	False	NA	NA	False	AATAAA	-22	NA	46014839	45857792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45880315_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.17	chr5	-	2350	8	NNC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	32.718340360085	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAAAGGGACTACTT	NA	False	NA	NA	False	AATAAA	-22	NA	46014833	45857792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45949018_45949055_45952634_45952701_46014688
ES.25932.18	chr5	-	1967	5	NIC	ENSMUSG00000015882.19	novel	5463	6	NA	NA	4	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.4523449046331	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGCAGAAAGAAAAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46014839	45857799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.19	chr5	-	6134	7	NIC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	1	-879	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	31.0304509939654	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTATCAGTTCCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	46014842	45858670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45880315_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.2	chr5	-	5443	5	NIC	ENSMUSG00000015882.19	novel	5463	6	NA	NA	-7	4	intron_retention	FALSE	canonical	3	9	junction_3	30.0447582782754	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTTTCAAAGTGGCC	NA	False	NA	0	True	AATAAA	-25	NA	46014862	45854518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.20	chr5	-	5826	8	FSM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	90	4561	-12	-1292	multi-exon	FALSE	canonical	3	6	junction_1	27.9175169938525	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGATCTGTCTTTATAT	NA	False	NA	NA	False	ACTAAA	-12	NA	46014867	45859083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45880315_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.21	chr5	-	1403	1	Antisense	novelGene_ENSMUSG00000104342.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTAACGTTTCAGGTA	NA	False	NA	NA	False	AATAAA	-16	NA	45861784	45860381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_45860400_45861800
ES.25932.22	chr5	-	7800	7	ISM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	32	23621	32	-1135	5prime_fragment	FALSE	canonical	3	10	junction_1	22.8691932520585	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGCACTCTGTGTTA	NA	False	NA	NA	False	AATACA	-15	NA	46014925	45878143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.23	chr5	-	7651	6	NIC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	-3	-1137	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	30.0759039764393	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTGCTGCACTCTGTGT	NA	False	NA	NA	False	AATACA	-13	NA	46014858	45878145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.24	chr5	-	7248	7	ISM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	118	24087	4	-1601	5prime_fragment	FALSE	canonical	3	10	junction_1	22.8691932520585	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGCTAGTGCTGTTT	NA	False	NA	NA	False	TATAAA	-27	NA	46014839	45878609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.25	chr5	-	6994	7	ISM	ENSMUSG00000015882.19	ENSMUST00000238522.2	10477	8	89	24370	-13	-1884	5prime_fragment	FALSE	canonical	3	10	junction_1	22.8691932520585	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCATTTTCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	46014868	45878892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_45885085_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.26	chr5	-	6400	7	NIC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	6	1482	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	25.2085743790128	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCAATGTCAGGGAACA	NA	False	NA	NA	False	AATAAA	-15	NA	46014837	45886194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014692
ES.25932.27	chr5	-	5002	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	-58	-60	44	4	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATACTGAGTTCTTTGAG	NA	False	NA	NA	False	AGTAAA	-21	NA	46014913	45887672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.28	chr5	-	4964	8	NNC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.5161118496944	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATACTGAGTTCTTTG	NA	False	NA	NA	False	AGTAAA	-19	NA	46014841	45887674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45949018_45949055_45952634_45952701_46014688
ES.25932.3	chr5	-	11109	8	NNC	ENSMUSG00000015882.19	novel	10477	8	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_2	30.5740986817941	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGTTTTTCAAAGT	NA	False	NA	-4	True	AATAAA	-21	NA	46014837	45854522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45859340_45880315_45885085_45890995_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.30	chr5	-	4866	6	NIC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	27.5782523014059	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTATACTGAGTTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	46014861	45887676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.31	chr5	-	4712	5	NIC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	3	3	junction_3	29.8747384925793	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTTGACTATACTGAG	NA	False	NA	NA	False	AGTAAA	-12	NA	46014842	45887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45891828_45893072_45893167_45904397_45904650_45952634_45952701_46014688
ES.25932.32	chr5	-	4969	8	NNC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.5914487184553	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTTGACTATACTGAG	NA	False	NA	NA	False	AGTAAA	-12	NA	46014842	45887681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45891828_45893072_45893167_45904397_45904650_45931359_45931407_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.33	chr5	-	5384	7	NNC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.3986531642978	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTCGGTGTGTGGT	NA	False	NA	NA	False	AGTAAA	-30	NA	46014839	45887732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45892344_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.34	chr5	-	5068	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	-346	162	-244	-162	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATGTATCTGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	46015201	45887894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.35	chr5	-	4445	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	7	432	-5	-432	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGATAGCTGATGACAA	NA	False	NA	NA	False	AGTAAA	-14	NA	46014848	45888164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.36	chr5	-	3945	1	Intergenic	novelGene_21562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTATAGCAGTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	45897611	45893666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_45893700_45897600
ES.25932.37	chr5	-	1662	1	FSM	ENSMUSG00000104852.2	ENSMUST00000195925.2	3416	1	1754	0	1754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	45917278	45915616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45915600_45917300
ES.25932.38	chr5	-	1851	5	Fusion	ENSMUSG00000105457.2_ENSMUSG00000015882.19	novel	678	4	NA	NA	1	23	multi-exon	FALSE	canonical	2	4	junction_1	29.7531510936237	107	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGACATTATGCTCTC	NA	False	NA	NA	False	NA	NA	NA	46014842	45927338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_45928760_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.39	chr5	-	2721	4	NNC	ENSMUSG00000015882.19	novel	678	4	NA	NA	2	639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.2491379207837	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCTTGCATGAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	46014841	45930024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45931082_45931418_45932864_45952634_45952701_46014688
ES.25932.4	chr5	-	5509	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-43	-3	3	0	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGTTTTTCAAAGT	NA	False	NA	-4	True	AATAAA	-21	NA	46014852	45854522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.40	chr5	-	710	5	NNC	ENSMUSG00000015882.19	novel	678	4	NA	NA	-6	256	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.0272058039392	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTCTCTGGCGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	46014836	45932344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_45932631_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ES.25932.5	chr5	-	5511	6	NIC	ENSMUSG00000015882.19	novel	5708	7	NA	NA	1	1	intron_retention	FALSE	canonical	3	9	junction_4	29.8462727991285	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAGATGTTTTTCAAA	NA	False	NA	-6	True	AATAAA	-19	NA	46014842	45854524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
ES.25932.7	chr5	-	5532	6	NIC	ENSMUSG00000015882.19	novel	5708	7	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_5	29.0268840904428	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAATTTCAGATGTTTT	NA	False	NA	-11	True	AATAAA	-14	NA	46014854	45854529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_46014688
ES.25932.8	chr5	-	5304	4	NIC	ENSMUSG00000015882.19	novel	5708	7	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_3	23.2999761564017	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAATTTCAGATGTTTT	NA	False	NA	-11	True	AATAAA	-14	NA	46014836	45854529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45893072_45893167_45904397_45904650_46014688
ES.25932.9	chr5	-	5278	4	NIC	ENSMUSG00000015882.19	novel	5463	6	NA	NA	4	-5	intron_retention	FALSE	canonical	3	3	junction_2	32.8362942827327	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGAATTTCAGATGTTT	NA	False	NA	-12	True	AATAAA	-13	NA	46014839	45854530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_45859340_45904397_45904650_45952634_45952701_46014688
ES.25933.1	chr5	+	248	1	Intergenic	novelGene_21565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGCTTGGAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	46572498	46572746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_46572500_46572700
ES.25934.1	chr5	+	4491	1	Intergenic	novelGene_21566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATAAGTTCTGTGACT	NA	False	NA	NA	False	NA	NA	NA	47312071	47316562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_47312100_47316600
ES.25935.1	chr5	-	1551	1	Intergenic	novelGene_21567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	48125116	48123565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_48123600_48125100
ES.25936.1	chr5	+	7792	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	-39	2207	-39	15	multi-exon	TRUE	canonical	3	71	junction_14	20.9676913758442	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTGCTGCTAAATTAC	NA	False	NA	31	True	AATAAA	-33	NA	48140440	48462868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.10	chr5	+	8033	39	NNC	ENSMUSG00000031558.16	novel	7785	39	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.1482093036269	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48140496	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48153415_48153590_48156403_48156520_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.11	chr5	+	7671	36	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	32.5303751303678	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48140496	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.12	chr5	+	7282	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	-463	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATCATCATTTTGGAC	NA	False	NA	NA	False	ATTAAA	-19	NA	48140496	48462390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.13	chr5	+	4706	18	ISM	ENSMUSG00000031558.16	ENSMUST00000033967.15	6564	36	1	68046	1	-2102	5prime_fragment	FALSE	canonical	3	71	junction_14	25.810997897345	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGCCTTTTTTATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	48140496	48393692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679
ES.25936.14	chr5	+	3182	5	NNC	ENSMUSG00000031558.16	novel	3210	5	NA	NA	1	13361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.4448065771453	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGCCAGGCATGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	48140496	48161035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48160133
ES.25936.15	chr5	+	7737	36	NNC	ENSMUSG00000031558.16	novel	7734	37	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	30.1438185357855	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140496	48462853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377439_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.16	chr5	+	3281	6	FSM	ENSMUSG00000031558.16	ENSMUST00000172998.8	3265	6	1	-17	1	17	multi-exon	FALSE	canonical	3	145	junction_5	11.9833217431562	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTCTTTTGGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	48140496	48340516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587
ES.25936.17	chr5	+	7765	36	NNC	ENSMUSG00000031558.16	novel	7734	37	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.8921056219406	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140496	48462853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157767_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.18	chr5	+	8517	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	772	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTTCCTACGAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	48140496	48463625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.19	chr5	+	6641	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.8976644540401	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAAAAGC	NA	False	NA	NA	False	AATAAA	-18	NA	48140497	48461738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377152_48377226_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.2	chr5	+	7804	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	-27	15	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTGCTGCTAAATTAC	NA	False	NA	31	True	AATAAA	-33	NA	48140452	48462868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.20	chr5	+	7748	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.1438185357855	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48140497	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381964_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.21	chr5	+	7005	33	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	1999	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.9567076075895	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCGGTCCATTTCGT	NA	False	NA	NA	False	CATAAA	-11	NA	48140497	48442289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729
ES.25936.22	chr5	+	7139	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_35	32.0485742445918	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAATTTTTGTTTCTAT	NA	False	NA	NA	False	AATAAA	-12	NA	48140497	48462293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460139_48460307_48461341
ES.25936.23	chr5	+	6730	5	ISM	ENSMUSG00000031558.16	ENSMUST00000173926.8	620	6	-1838	-1412	2	1412	intron_retention	FALSE	canonical	3	152	junction_2	10.8742815854658	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTCATCTTTCCATAA	NA	False	NA	NA	False	NA	NA	NA	48140497	48331947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496
ES.25936.24	chr5	+	6173	35	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-5460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	40.3810997620555	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGGATCTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	48140497	48454394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381980_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453884_48453944
ES.25936.25	chr5	+	7254	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	18	2688	2	-466	multi-exon	FALSE	canonical	3	71	junction_14	20.9676913758442	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTTAGATCATCATTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48140497	48462387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.26	chr5	+	7645	35	NIC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	33.1672520567583	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTCCCACGTTAACC	NA	False	NA	13	True	AATAAA	-15	NA	48140497	48462850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.27	chr5	+	4570	25	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-732	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	22.4559754482706	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGACTTTCAGATTGA	NA	False	NA	NA	False	AAGAAA	-2	NA	48140497	48404688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491
ES.25936.28	chr5	+	7302	38	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8618502574184	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48140497	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48140537_48140976_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.29	chr5	+	8885	35	NIC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	-985	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	33.1672520567583	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCAGAGTTAATTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	48140497	48464090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.3	chr5	+	7747	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	1	53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	38.9419243154181	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAGTGAACTGTGCTC	NA	False	NA	69	True	NA	NA	NA	48140496	48462906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377441_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460139_48460307_48461341
ES.25936.30	chr5	+	9968	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCCTGTGGGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	48140497	48465077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.31	chr5	+	3910	8	ISM	ENSMUSG00000031558.16	ENSMUST00000033967.15	6564	36	2	113553	2	-162	5prime_fragment	FALSE	canonical	3	139	junction_7	13.4255315708237	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTCTTCCAGTGTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	48140497	48348185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770
ES.25936.32	chr5	+	2728	7	NNC	ENSMUSG00000031558.16	novel	3265	6	NA	NA	2	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.2570881031159	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTTACGTGATCA	NA	False	NA	NA	False	AATAAA	-14	NA	48140497	48340350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48140523_48140908_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587
ES.25936.33	chr5	+	7259	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	-452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	32.8996495235969	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGACTGTTTCTTGAT	NA	False	NA	NA	False	ATTAAA	-30	NA	48140497	48462401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389262_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.34	chr5	+	3560	3	FSM	ENSMUSG00000031558.16	ENSMUST00000174061.8	3350	3	2	-212	2	212	multi-exon	FALSE	canonical	3	152	junction_2	12.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTGAATAGATGGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	48140497	48147886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461
ES.25936.35	chr5	+	6409	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.9040324089388	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140497	48462853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48141226_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.36	chr5	+	5034	3	FSM	ENSMUSG00000031558.16	ENSMUST00000174061.8	3350	3	2	-1686	2	1686	multi-exon	FALSE	canonical	3	152	junction_2	12.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGTTTCCACTTAAT	NA	False	NA	NA	False	NA	NA	NA	48140497	48149360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461
ES.25936.37	chr5	+	8957	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	18	985	2	-985	multi-exon	FALSE	canonical	3	71	junction_14	20.9676913758442	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCAGAGTTAATTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	48140497	48464090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.38	chr5	+	7144	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	32.3013396503903	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTGTTTCTATGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	48140497	48462297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399951_48402004_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.39	chr5	+	7198	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	31.1819134819379	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTTGTTTCTATGAG	NA	False	NA	NA	False	AATAAA	-15	NA	48140497	48462296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346944_48349532_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.4	chr5	+	6648	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	18	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGCTTGTACTAAAGCT	NA	False	NA	NA	False	AATAAA	-36	NA	48140496	48461756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.40	chr5	+	4225	21	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	121	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	23.582779734374	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGTGAGAGAAGATTT	NA	False	NA	NA	False	NA	NA	NA	48140497	48395915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717
ES.25936.41	chr5	+	4729	19	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	2	-2102	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	24.7860599013256	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGCCTTTTTTATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	48140497	48393692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679
ES.25936.42	chr5	+	7691	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	32.8643470363013	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48140497	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343883_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.43	chr5	+	4173	5	FSM	ENSMUSG00000031558.16	ENSMUST00000197400.5	3210	5	-1	-962	-1	962	multi-exon	FALSE	canonical	0	0	junction_4	72.4448065771453	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTTGTGACAATGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	48140498	48242835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48240940
ES.25936.46	chr5	+	7434	37	NNC	ENSMUSG00000031558.16	novel	7734	37	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4394973397295	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTCCCACGTTAACCTG	NA	False	NA	15	True	AATAAA	-17	NA	48140500	48462852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48141226_48141507_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.47	chr5	+	7352	38	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8618502574184	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTCCCACGTTAACC	NA	False	NA	13	True	AATAAA	-15	NA	48140500	48462850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48140523_48140908_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.49	chr5	+	6239	2	ISM	ENSMUSG00000031558.16	ENSMUST00000174061.8	3350	3	6	-1686	2	1686	intron_retention	FALSE	canonical	3	177	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGTTTCCACTTAAT	NA	False	NA	NA	False	NA	NA	NA	48140501	48149360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180
ES.25936.5	chr5	+	7155	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	1	-555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	31.758771997126	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTTCTATGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	48140496	48462298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440882_48453806_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.50	chr5	+	7680	38	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	3	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	31.8618502574184	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTGCTGCTAAATT	NA	False	NA	29	True	AATAAA	-31	NA	48140502	48462866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48416924_48416995_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.51	chr5	+	5618	33	ISM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	253	11024	214	-5803	5prime_fragment	FALSE	canonical	3	71	junction_14	21.7363238252815	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTCTGTTCAGGGGTTA	NA	False	NA	NA	False	CATAAA	-15	NA	48140732	48454051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750
ES.25936.52	chr5	+	7155	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	833	265	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTGGCCCTTTTCTTAG	NA	False	NA	NA	False	AATGAA	-20	NA	48141351	48463118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.53	chr5	+	6654	36	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	-823	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	32.5978088658907	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTCCCACGTTAACC	NA	False	NA	13	True	AATAAA	-15	NA	48141512	48462850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.54	chr5	+	3446	25	ISM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	1138	57811	-718	1844	5prime_fragment	FALSE	canonical	3	71	junction_14	22.8710151356107	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTACATGTCAAGG	NA	False	NA	NA	False	GATAAA	-22	NA	48141617	48407264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119
ES.25936.55	chr5	+	6018	32	NNC	ENSMUSG00000031558.16	novel	7734	37	NA	NA	-645	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	31.6348508408231	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48141690	48462853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377428_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.56	chr5	+	5921	37	NNC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.9301657661414	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48142348	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381964_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.57	chr5	+	5726	35	NNC	ENSMUSG00000031558.16	novel	3015	15	NA	NA	723	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6080710149758	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48143058	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48143290_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414450_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.58	chr5	+	3136	1	Intergenic	novelGene_21569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGAAAAAAGAATGGAAGG	NA	False	NA	NA	False	NA	NA	NA	48258647	48261783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_48258600_48261800
ES.25936.59	chr5	+	5173	30	NIC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	194	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	35.4381442652619	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTCCCACGTTAACCT	NA	False	NA	14	True	AATAAA	-16	NA	48339637	48462851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.6	chr5	+	3723	5	NNC	ENSMUSG00000031558.16	novel	3210	5	NA	NA	1	13029	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	72.0151893700211	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGACCAGTTGTTTCAT	NA	False	NA	NA	False	AATAAA	-28	NA	48140496	48160703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48159260
ES.25936.60	chr5	+	5580	31	ISM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	199160	1959	196	263	3prime_fragment	FALSE	canonical	3	71	junction_9	21.9035512087779	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTTTGGCCCTTTTCTT	NA	False	NA	NA	False	AATGAA	-18	NA	48339639	48463116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.61	chr5	+	5012	12	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	264911	0	-578	0	3prime_fragment	FALSE	canonical	3	132	junction_7	13.7936384906201	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	4386	False	NA	16	True	AATAAA	-18	NA	48405406	48462853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.62	chr5	+	9174	1	NIC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	-840	2241	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATCTTTTAAACTGA	NA	False	NA	NA	False	AAAACA	-27	NA	48413074	48422248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48413100_48422200
ES.25936.63	chr5	+	3787	11	ISM	ENSMUSG00000031558.16	ENSMUST00000174313.8	7734	37	272950	1	-469	-1	3prime_fragment	FALSE	canonical	3	132	junction_6	14.0071410359145	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTCCCACGTTAACCTG	NA	False	NA	15	True	AATAAA	-17	NA	48413445	48462852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.7	chr5	+	6641	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	17	3302	1	35	multi-exon	FALSE	canonical	3	71	junction_14	20.9676913758442	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCCCTACACTGGAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	48140496	48461773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.8	chr5	+	7736	36	NNC	ENSMUSG00000031558.16	novel	9960	36	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	30.1438185357855	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTCCCACGTTAACCTG	NA	False	NA	15	True	AATAAA	-17	NA	48140496	48462852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381978_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ES.25936.9	chr5	+	2664	5	NNC	ENSMUSG00000031558.16	novel	3210	5	NA	NA	1	11970	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	72.0151893700211	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAAGATTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	48140496	48159644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48159260
ES.25937.1	chr5	-	1569	1	Intergenic	novelGene_21568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGCTATTGGTACAGAA	NA	False	NA	NA	False	NA	NA	NA	48211912	48210343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_48210300_48211900
ES.25938.1	chr5	+	1586	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	27	3	27	-3	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTGTAGTTCTACATA	NA	False	NA	10	True	ATTAAA	-18	NA	48529697	48546184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.11	chr5	+	895	7	NIC	ENSMUSG00000029089.9	novel	3300	8	NA	NA	-256	-209	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	41.0555179672058	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACGTTGAGTGCTGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	48531520	48545689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_48531590_48531714_48531881_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.3	chr5	+	1490	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	-74	6	30	-5	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATATTGTAGTTCTACA	NA	False	NA	8	True	ATTAAA	-16	NA	48529700	48546182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.4	chr5	+	3092	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	51	-1527	51	1526	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAATACATTAATATCT	NA	False	NA	NA	False	AATAAA	-30	NA	48529721	48547714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.5	chr5	+	1304	12	NNC	ENSMUSG00000029089.9	novel	1616	9	NA	NA	51	4689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.3137820422794	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGGTTTCATATACTC	NA	False	NA	NA	False	AAAAAG	-7	NA	48529721	48560272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48552906_48552976_48553937_48554044_48555056_48555163_48559769_48559818_48560028
ES.25938.6	chr5	+	2993	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	-52	-1519	52	1519	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGCCAAATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	48529722	48547707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.7	chr5	+	2947	16	NNC	ENSMUSG00000029089.9	novel	1616	9	NA	NA	-38	3	intron_retention	FALSE	canonical	0	0	junction_9	45.1749192952609	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAATAACAAA	NA	False	NA	NA	False	NA	NA	NA	48529736	48571610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444_48545685_48547818_48547877_48548304_48548362_48552906_48554044_48555056_48555163_48559769_48559818_48566771_48566840_48571184
ES.25938.8	chr5	+	1434	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	74	108	-30	-108	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTGTAGCCCCACAAT	NA	False	NA	-95	True	AGTAAA	-11	NA	48529744	48546079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25938.9	chr5	+	1035	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	84	497	-20	-208	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACGTTGAGTGCTGTAG	NA	False	NA	NA	False	ATTAAA	-12	NA	48529754	48545690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ES.25939.1	chr5	-	5158	2	NNC	ENSMUSG00000029088.17	novel	2257	8	NA	NA	101195	4017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	48548411	48542826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_48547877_48548303
ES.25939.2	chr5	-	5581	1	Genic_Genomic	ENSMUSG00000029088.17	novel	NA	NA	NA	NA	101195	4013	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	48548411	48542830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_48542800_48548400
ES.2594.1	chr10	+	175	1	Intergenic	novelGene_1965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGGAGGGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	36834842	36835017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_36834800_36835000
ES.25940.1	chr5	-	2546	4	Intergenic	novelGene_21570	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGAAGTGTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	50004253	49944745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_49947008_49981630_49981696_49989841_49989983_50004175
ES.25941.1	chr5	-	4946	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	24	-490	24	490	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCGTGGTTTTCAGTTG	NA	False	NA	NA	False	NA	NA	NA	50216324	50116807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.10	chr5	-	4379	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	74	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	111.875164666408	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGGTGGCTTATGTT	NA	False	NA	-5	True	AATAAA	-19	NA	50216274	50117292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170766_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.14	chr5	-	4286	18	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.902455998397	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGCTGGTGGCTTAT	NA	False	NA	-8	True	AATAAA	-16	NA	50216321	50117295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121158_50129316_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.15	chr5	-	4458	21	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	168.718878611731	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGCTGGTGGCTTAT	NA	False	NA	-8	True	AATAAA	-16	NA	50216345	50117295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50117900_50118130_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
ES.25941.16	chr5	-	4703	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	146.468020012652	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	50216323	50117296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50128639_50128887_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.17	chr5	-	7595	1	Genic_Genomic	ENSMUSG00000029090.13	novel	NA	NA	NA	NA	4526	1	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	50124891	50117296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_50117300_50124900
ES.25941.18	chr5	-	4215	3	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	92757	-1	5826	1	3prime_fragment	FALSE	canonical	3	448	junction_1	10	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	50123591	50117296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50118857_50118989_50119086_50121032
ES.25941.19	chr5	-	4456	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.683649897024	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	50216352	50117296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129321_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.2	chr5	-	7324	18	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	20	417	intron_retention	FALSE	canonical	3	391	junction_6	31.8358680005663	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTGGAACCTGTTGTG	NA	False	NA	NA	False	TTTAAA	-33	NA	50216328	50116880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.20	chr5	-	6886	18	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-32	1	intron_retention	FALSE	canonical	3	391	junction_6	34.5455919601247	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTGCTGGTGGCTTA	NA	False	NA	-9	True	AATAAA	-15	NA	50216380	50117296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.23	chr5	-	4384	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216324	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118366_50118437_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.24	chr5	-	4399	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	112.274588992048	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216282	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147614_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.25	chr5	-	4528	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	146.573514025728	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216341	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168671_50168727_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.26	chr5	-	7565	16	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	41858	0	-7644	0	intron_retention	FALSE	canonical	3	391	junction_6	31.3170170283754	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50174490	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734
ES.25941.27	chr5	-	4384	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216351	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893_50216213_50216311
ES.25941.29	chr5	-	4465	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	111.875164666408	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216344	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168894_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.3	chr5	-	4834	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	34	-388	34	388	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACAGAATGATTTTTTT	NA	False	NA	NA	False	CATAAA	-32	NA	50216314	50116909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.31	chr5	-	4616	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	25	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	172.242324306625	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216323	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156523_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
ES.25941.34	chr5	-	4331	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216311	50117297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50117889_50118000_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.36	chr5	-	4626	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-71	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	146.662255452844	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216419	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166467_50166612_50166745_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.37	chr5	-	4546	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	146.148655015641	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216293	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50139419_50139542_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.38	chr5	-	4428	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216340	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50117962_50118004_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.39	chr5	-	4398	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216337	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50117662_50117731_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.4	chr5	-	4397	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	24	9	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	110.779964873094	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGGCTTATGTTTACA	NA	False	NA	-1	True	AATAAA	-23	NA	50216324	50117288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166745_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.42	chr5	-	4395	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	112.067013130978	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50216344	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156554_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.43	chr5	-	7359	6	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-5599	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	185.907073560959	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTGCTGGTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	50135016	50117298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118497_50118785_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292
ES.25941.44	chr5	-	4352	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.332525389443	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTGTGCTGGTGGC	NA	False	NA	-12	True	AATAAA	-12	NA	50216273	50117299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118136_50118186_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.47	chr5	-	4544	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	146.672888728929	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTGTGCTGGTGGC	NA	False	NA	-12	True	AATAAA	-12	NA	50216334	50117299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50169820_50169901_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.48	chr5	-	3267	10	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	24	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	150.913514599882	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCATTGTGCTGGTGG	NA	False	NA	-13	True	AATAAA	-11	NA	50216324	50117300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50215893
ES.25941.49	chr5	-	3032	16	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-21	10402	-21	-4248	5prime_fragment	FALSE	canonical	3	391	junction_3	36.2836969817943	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGGACAATCTATTGA	NA	False	NA	NA	False	AATAAA	-23	NA	50216369	50127699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.5	chr5	-	4686	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-197	-9	-197	9	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGGCTTATGTTTACA	NA	False	NA	-1	True	AATAAA	-23	NA	50216545	50117288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.50	chr5	-	3401	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	12	18004	12	9561	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTGTTCCTTCACT	NA	False	NA	NA	False	AATAGA	-39	NA	50216336	50135301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.51	chr5	-	3075	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	-200	18542	-200	9023	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTTTGATTGTCACTT	NA	False	NA	NA	False	AATAAA	-30	NA	50216548	50135839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.52	chr5	-	2514	15	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	71	8672	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	165.228058224049	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAACTGGCTCCATTTA	NA	False	NA	NA	False	NA	NA	NA	50216277	50136190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50136494_50136701_50136916_50144815_50145020_50146833_50146895_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.53	chr5	-	2500	14	ISM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	23	18894	23	8671	5prime_fragment	FALSE	canonical	3	391	junction_1	38.4304489732299	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATAACTGGCTCCATTT	NA	False	NA	NA	False	NA	NA	NA	50216325	50136191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25941.54	chr5	-	3889	1	Intergenic	novelGene_21571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATTATTTAAAAGC	NA	False	NA	NA	False	NA	NA	NA	50200169	50196280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_50196300_50200200
ES.25941.55	chr5	-	1276	3	NNC	ENSMUSG00000029090.13	novel	396	3	NA	NA	-55	24	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2.5	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTATAAGGTATCCCAG	NA	False	NA	NA	False	NA	NA	NA	50216403	50207706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50208303_50208478_50208649_50215893
ES.25941.56	chr5	-	1358	4	NNC	ENSMUSG00000029090.13	novel	396	3	NA	NA	19	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.08248290463863	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50216329	50207756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50208303_50208478_50208645_50215475_50215686_50215893
ES.25941.6	chr5	-	4925	20	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	-226	9	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	145.136195469831	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGGCTTATGTTTACA	NA	False	NA	-1	True	AATAAA	-23	NA	50216574	50117288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
ES.25941.7	chr5	-	4446	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	64	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	110.470486534014	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGGCTTATGTTTAC	NA	False	NA	-2	True	AATAAA	-22	NA	50216284	50117289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174146_50174241_50183048_50183121_50215893
ES.25941.9	chr5	-	4523	20	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	23	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	145.14111959861	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGGTGGCTTATGTT	NA	False	NA	-5	True	AATAAA	-19	NA	50216325	50117292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50146833_50146895_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ES.25942.1	chr5	-	242	1	Intergenic	novelGene_21572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATCTTTACTATCAT	NA	False	NA	NA	False	NA	NA	NA	50610734	50610492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_50610500_50610700
ES.25943.1	chr5	+	179	1	Intergenic	novelGene_21573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGGTCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	52188379	52188558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_52188400_52188600
ES.25944.1	chr5	+	5010	1	Antisense	novelGene_ENSMUSG00000029169.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52306643	52311653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_52306600_52311700
ES.25945.1	chr5	+	1686	1	Intergenic	novelGene_21574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTTTATTTTCAAGTC	NA	False	NA	NA	False	TTTAAA	-26	NA	52335331	52337017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_52335300_52337000
ES.25946.1	chr5	+	1402	3	NIC	ENSMUSG00000097145.6	novel	837	6	NA	NA	3	-14	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	8.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTGGAAAGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52348016	52355312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52348280_52350259_52350321_52354234
ES.25946.2	chr5	+	1547	4	NNC	ENSMUSG00000097145.6	novel	2120	4	NA	NA	6	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.9566858950296	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGATATGTATTCAAT	NA	False	NA	NA	False	NA	NA	NA	52348026	52355351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52348280_52350259_52350315_52351739_52351862_52354234
ES.25947.1	chr5	-	6744	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	39	-3773	14	3773	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATAAGTATATTTTAT	NA	False	NA	NA	False	AATGAA	-10	NA	52347817	52303771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.10	chr5	-	6107	12	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-5	-11	intron_retention	FALSE	canonical	3	749	junction_8	49.4921314390496	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCCCAAGTCCTTCTG	NA	False	NA	-9	True	AATAAA	-16	NA	52347841	52307555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.12	chr5	-	2855	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	219.345368158401	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347837	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311501_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.13	chr5	-	3010	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	224.805899183479	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347851	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317782_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.14	chr5	-	2530	13	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	2919	-13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	230.89011034593	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52341837	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52315096_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809
ES.25947.15	chr5	-	2860	14	NNC	ENSMUSG00000029169.12	novel	2375	14	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	291.236498785527	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347832	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324106_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.16	chr5	-	6550	2	FSM	ENSMUSG00000029169.12	ENSMUST00000199343.2	1253	2	-2189	-3108	1641	-13	multi-exon	FALSE	canonical	3	842	junction_1	0	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52317334	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52311570_52314796
ES.25947.17	chr5	-	2943	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	canonical	1	45	junction_1	212.225374230924	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347851	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308072_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.18	chr5	-	6678	12	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	2	-13	intron_retention	FALSE	canonical	3	749	junction_8	49.5054884677422	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347854	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.20	chr5	-	2836	13	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-25	-13	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	229.686183858663	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347881	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311507_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.21	chr5	-	2991	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	3	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	224.041838865267	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCCCAAGTCCTTC	NA	False	NA	-11	True	AATAAA	-14	NA	52347853	52307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314925_52317579_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.24	chr5	-	5940	9	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-9823	-14	intron_retention	FALSE	canonical	3	782	junction_4	40.7735744692564	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGGCCCAAGTCCTT	NA	False	NA	-12	True	AATAAA	-13	NA	52328798	52307558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262
ES.25947.25	chr5	-	3475	16	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-1675	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	283.958322450477	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGGCCCAAGTCCTT	NA	False	NA	-12	True	AATAAA	-13	NA	52349531	52307558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621_52347716_52347836_52348272_52349346
ES.25947.26	chr5	-	3990	13	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	14	-14	intron_retention	FALSE	non_canonical	0	0	junction_7	232.035737190057	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGGCCCAAGTCCTT	NA	False	NA	-12	True	AATAAA	-13	NA	52347817	52307558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324040_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.27	chr5	-	3220	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	96	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	224.209089861074	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATCTTGGCCCAAGTCCT	NA	False	NA	-13	True	AATAAA	-12	NA	52347623	52307559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347163
ES.25947.28	chr5	-	2875	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	-4	139	-4	-139	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGATCGTTGTAATTG	NA	False	NA	NA	False	NA	NA	NA	52347860	52307683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.29	chr5	-	2780	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	-56	286	-56	204	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTGTGTTGACACTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	52347912	52307830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.3	chr5	-	3038	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	-173	-490	-36	0	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347892	52307544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.30	chr5	-	3339	13	ISM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	13	689	-7	-199	5prime_fragment	FALSE	canonical	3	749	junction_9	48.7046084974398	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGATTTGTATTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	52347843	52308233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.31	chr5	-	2959	12	FSM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	-5	-404	0	2	multi-exon	FALSE	canonical	3	749	junction_8	40.15610036712	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGGTTTTTAAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52347836	52310663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.32	chr5	-	5237	11	NIC	ENSMUSG00000029169.12	novel	2550	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	749	junction_7	39.2321296898346	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAGTTTAAAGTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	52347866	52311067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.33	chr5	-	5076	10	NIC	ENSMUSG00000029169.12	novel	2550	12	NA	NA	-1	1585	intron_retention	FALSE	canonical	3	749	junction_6	39.6123188221686	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTTGAGTTCCTGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	52347832	52314421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.34	chr5	-	3975	10	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	-50	4504	-25	435	5prime_fragment	FALSE	canonical	3	749	junction_6	39.6123188221686	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGCCTTCTGGAATT	NA	False	NA	NA	False	ATTAAA	-22	NA	52347881	52315571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.35	chr5	-	2273	10	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	9	6147	9	-1208	5prime_fragment	FALSE	canonical	3	749	junction_6	39.6123188221686	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGAGCCTTTCCTAC	NA	False	NA	NA	False	ATTAAA	-22	NA	52347822	52317214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.36	chr5	-	2175	10	ISM	ENSMUSG00000029169.12	ENSMUST00000199321.5	2550	12	-23	6277	2	-1338	5prime_fragment	FALSE	canonical	3	749	junction_6	39.6123188221686	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGGCTCTATTGAG	NA	False	NA	NA	False	AGTAAA	-22	NA	52347854	52317344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.4	chr5	-	5862	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-1673	-6	intron_retention	FALSE	canonical	0	0	junction_12	299.129981048591	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTTCTGTATCT	NA	False	NA	-4	True	AATAAA	-21	NA	52349529	52307550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52348724_52348983_52349346
ES.25947.5	chr5	-	7708	12	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	5	-6	intron_retention	FALSE	canonical	3	749	junction_8	40.4777257388769	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTTCTGTATCT	NA	False	NA	-4	True	AATAAA	-21	NA	52347851	52307550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52308121_52309151_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.6	chr5	-	2936	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	222.489810949471	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTCCTTCTGTATCT	NA	False	NA	-4	True	AATAAA	-21	NA	52347851	52307550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311507_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.7	chr5	-	5659	13	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	749	junction_9	48.9020421068714	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAAGTCCTTCTGTAT	NA	False	NA	-6	True	AATAAA	-19	NA	52347861	52307552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.8	chr5	-	5550	13	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	14	-10	intron_retention	FALSE	canonical	3	8	junction_3	229.686183858663	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCCAAGTCCTTCTGT	NA	False	NA	-8	True	AATAAA	-17	NA	52347817	52307554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52308121_52309151_52309322_52311378_52311507_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25947.9	chr5	-	6674	11	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	8	-11	intron_retention	FALSE	canonical	3	749	junction_7	50.6479022270419	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCCCAAGTCCTTCTG	NA	False	NA	-9	True	AATAAA	-16	NA	52347823	52307555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ES.25948.1	chr5	-	179	1	Intergenic	novelGene_21575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGTCCTGC	NA	False	NA	NA	False	NA	NA	NA	52434486	52434307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_52434300_52434500
ES.25949.1	chr5	-	3314	12	FSM	ENSMUSG00000045790.11	ENSMUST00000059428.7	3295	12	-21	2	-21	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.385694607919935	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATGGTTTCCCTTGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	52628884	52531994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561532_52562377_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ES.25949.2	chr5	-	179	1	Intergenic	novelGene_21576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGGTAGTGTT	7873	False	NA	NA	False	NA	NA	NA	52558501	52558322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_52558300_52558500
ES.2595.1	chr10	+	2296	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	-286	-5	-286	5	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTGTTTATTATGAA	NA	False	NA	19	True	ATTAAA	-20	NA	36850253	36877890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ES.2595.10	chr10	+	2313	13	NIC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	5	-2	intron_retention	FALSE	canonical	3	1084	junction_4	92.0099632286272	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCGTTTTCTGTCTGTTT	NA	False	NA	11	True	ATTAAA	-12	NA	36850544	36877882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874566_36876364_36876423_36877524
ES.2595.11	chr10	+	1879	13	NIC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	346.481080131208	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTTCTGTCTGTTTAT	NA	False	NA	13	True	ATTAAA	-14	NA	36850546	36877884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_36850800_36861122_36861236_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ES.2595.14	chr10	+	1903	14	NNC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	-5	-58	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_13	331.192394790194	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGAGCTGATTTTTCC	NA	False	NA	4	True	ATTAAA	-13	NA	36850560	36877826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876401_36877524
ES.2595.16	chr10	+	1821	11	ISM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	13225	4	-3997	-3	3prime_fragment	FALSE	canonical	3	1084	junction_1	88.6399458483589	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATCGTTTTCTGTCTGTT	NA	False	NA	10	True	ATTAAA	-11	NA	36863764	36877881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ES.2595.17	chr10	+	2676	3	NIC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	-1223	-1	intron_retention	FALSE	canonical	3	1214	junction_1	60.5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTTTTCTGTCTGTTTA	NA	False	NA	12	True	ATTAAA	-13	NA	36872944	36877883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_36873499_36873962_36874566_36876364
ES.2595.4	chr10	+	1923	14	NNC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	1	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	336.000035221187	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCTGATTTTTCCATC	NA	False	NA	7	True	ATTAAA	-16	NA	36850540	36877829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874541_36876364_36876423_36877524
ES.2595.5	chr10	+	2086	15	NNC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	438.75919665924	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTTCTGTCTGTTTAT	NA	False	NA	13	True	ATTAAA	-14	NA	36850542	36877884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874225_36874311_36874409_36874566_36876364_36876423_36877524
ES.2595.6	chr10	+	7395	6	NIC	ENSMUSG00000019777.17	novel	3250	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1084	junction_3	106.480045078879	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	36850542	36872106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_36850800_36861122_36861236_36862302_36864151_36865145_36867895_36869603_36869697_36869771
ES.2595.9	chr10	+	5801	9	NIC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	1084	junction_3	108.054312153657	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTTCTGTCTGTTTAT	NA	False	NA	13	True	ATTAAA	-14	NA	36850543	36877884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_36850800_36861122_36861236_36862302_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36874566_36876364
ES.25950.1	chr5	-	6353	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-72	-8	-72	8	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCTGGTCTACTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	52723717	52690850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ES.25950.10	chr5	-	7948	7	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-78	-4385	intron_retention	FALSE	canonical	3	5	junction_5	15.7656447871806	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52723723	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52717577_52719467_52719540_52719754_52721380_52723259
ES.25950.11	chr5	-	5269	1	FSM	ENSMUSG00000104974.2	ENSMUST00000197351.2	2439	1	2174	-5004	2174	5004	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52700512	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52695200_52700500
ES.25950.12	chr5	-	1579	7	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-62	-24723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5225979431439	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTAAATTTTCTTGGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	52723707	52715581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52716193_52717504_52717577_52719467_52719540_52719754_52719814_52720780_52721026_52721307_52721380_52723259
ES.25950.13	chr5	-	2068	1	NIC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	5183	-25536	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52718462	52716394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52716400_52718500
ES.25950.14	chr5	-	3558	3	NIC	ENSMUSG00000039252.12	novel	6456	7	NA	NA	-78	-25536	intron_retention	FALSE	canonical	3	46	junction_2	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52723723	52716394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52717577_52719467_52721380_52723259
ES.25950.2	chr5	-	8119	7	NIC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-76	2	intron_retention	FALSE	canonical	3	38	junction_2	4.6785562825394	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTTTGATCTCTGGTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	52723721	52690856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52721380_52723259
ES.25950.3	chr5	-	6303	9	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	66	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1882125274868	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGCTTTGATCTCTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	52723738	52690859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52691051_52691095_52696123_52703794_52703943_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ES.25950.4	chr5	-	4020	7	NIC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	65	-4115	intron_retention	FALSE	canonical	3	38	junction_2	4.6785562825394	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGGATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	52723739	52694973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52721380_52723259
ES.25950.5	chr5	-	3542	8	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-64	-4348	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	14.7634407803015	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCAGGCTCAGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	52723709	52695206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52719754_52721380_52723259
ES.25950.6	chr5	-	2008	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-120	4385	39	-4385	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52723765	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ES.25950.7	chr5	-	5656	6	ISM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-120	4385	39	-4385	intron_retention	FALSE	canonical	3	38	junction_2	5.11468474101777	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52723765	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467
ES.25950.8	chr5	-	1882	8	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-11	-4385	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	15.3237177777004	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52723656	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52696123_52703794_52703943_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ES.25950.9	chr5	-	1632	9	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-72	-4385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	15.5483118054662	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	52723717	52695243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259_52723362_52723689
ES.25951.1	chr5	-	184	1	Intergenic	novelGene_21577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGTCACTTGATGC	NA	False	NA	NA	False	NA	NA	NA	52751543	52751359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_52751400_52751500
ES.25952.1	chr5	-	5275	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-16	-7	-16	7	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTTGCACTCTTTATT	NA	False	NA	31	True	NA	NA	NA	52827066	52797421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.10	chr5	-	4061	11	FSM	ENSMUSG00000029173.13	ENSMUST00000150709.8	5185	11	32	1092	32	-3	multi-exon	FALSE	canonical	2	6	junction_9	24.1412510032103	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGGCCCAGCACTTAA	NA	False	NA	-6	True	AATAAA	-12	NA	52827018	52798520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
ES.25952.11	chr5	-	6940	10	NIC	ENSMUSG00000029173.13	novel	5252	11	NA	NA	10	-5	intron_retention	FALSE	canonical	3	65	junction_1	10.4774890970011	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGCCCAGCACTT	NA	False	NA	-8	True	AATAAA	-10	NA	52827040	52798522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52826396_52826916
ES.25952.12	chr5	-	2814	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	7	2431	7	-1342	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTTGTACATACTCTC	NA	False	NA	NA	False	AGTAAA	-45	NA	52827043	52799859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.13	chr5	-	2352	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	9	2891	9	-1802	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTTTCTACAAGTTG	NA	False	NA	NA	False	NA	NA	NA	52827041	52800319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.14	chr5	-	1630	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-10	3632	-10	-2543	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTGAGGGTGATTGC	NA	False	NA	NA	False	NA	NA	NA	52827060	52801060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.15	chr5	-	2081	5	ISM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	9	22712	9	-6456	5prime_fragment	FALSE	canonical	3	71	junction_3	7.29297607290741	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTACTTACAAGTCTTA	NA	False	NA	NA	False	ATTAAA	-25	NA	52827041	52820140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.2	chr5	-	5063	10	NIC	ENSMUSG00000029173.13	novel	5185	11	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	26.8245327183076	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGTCTTCTTGCACTC	NA	False	NA	25	True	AATAAA	-42	NA	52827046	52797427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52826307_52826396_52826916
ES.25952.3	chr5	-	4161	2	NNC	ENSMUSG00000029173.13	novel	3665	8	NA	NA	3243	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGTCTTCTTGCACTC	NA	False	NA	25	True	AATAAA	-42	NA	52802579	52797427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52801450_52802440
ES.25952.4	chr5	-	8837	11	NNC	ENSMUSG00000029173.13	novel	5252	11	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_5	33.4970147923662	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAAGTCTTCTTGCA	NA	False	NA	22	True	AATAAA	-39	NA	52827035	52797430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52814852_52815020_52817971_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.6	chr5	-	5164	11	FSM	ENSMUSG00000029173.13	ENSMUST00000150709.8	5185	11	2	19	2	-19	multi-exon	FALSE	canonical	2	6	junction_9	24.1412510032103	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTGCAAATAATCTAC	NA	False	NA	5	True	AATAAA	-33	NA	52827048	52797447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
ES.25952.7	chr5	-	5136	10	NIC	ENSMUSG00000029173.13	novel	5252	11	NA	NA	-11	-24	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	26.4887583889403	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGGAAGTGCAAATAA	NA	False	NA	0	True	AATAAA	-28	NA	52827061	52797452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25952.8	chr5	-	5006	10	NIC	ENSMUSG00000029173.13	novel	5185	11	NA	NA	-46	-29	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	33.6419050854404	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAATCTGGAAGTGCA	NA	False	NA	-5	True	AATAAA	-23	NA	52827003	52797457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
ES.25952.9	chr5	-	4174	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	-11	1089	-11	0	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCCAGCACTTAATTA	NA	False	NA	-3	True	AATAAA	-15	NA	52827061	52798517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ES.25953.1	chr5	+	3202	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	-58	-5	-58	5	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTGTGTATTGAATG	NA	False	NA	12	True	AATAAA	-21	NA	52898857	52926687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.10	chr5	+	1529	9	NIC	ENSMUSG00000029186.13	novel	3034	10	NA	NA	0	-1437	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTACGATTTTT	NA	False	NA	NA	False	AATATA	-29	NA	52898951	52925245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.11	chr5	+	8696	3	NNC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	4005	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	76	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52915948	52926682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52918350_52919773_52922971_52923584
ES.25953.12	chr5	+	4078	3	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	17134	4	4142	-4	3prime_fragment	FALSE	canonical	3	152	junction_1	2.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTCCATTGTTCTGTG	NA	False	NA	3	True	AATAAA	-12	NA	52916085	52926678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_52918350_52919773_52919834_52924924
ES.25953.13	chr5	+	2350	4	NNC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	5738	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.8605974904589	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCATTGTTCTGTGTA	NA	False	NA	5	True	AATAAA	-14	NA	52917681	52926680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52918016_52918149_52918350_52919773_52919834_52924924
ES.25953.2	chr5	+	3013	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52898904	52926682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.3	chr5	+	3749	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	134	junction_2	15.5638804608619	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCATTGTTCTGTGTA	NA	False	NA	5	True	AATAAA	-14	NA	52898916	52926680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52899311_52905710_52905848_52907949_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.4	chr5	+	2288	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	13	-1451	intron_retention	FALSE	canonical	3	134	junction_2	15.5638804608619	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTGAATGTAATCAAA	NA	False	NA	NA	False	AATATA	-15	NA	52898928	52925231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52899311_52905710_52905848_52907949_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.5	chr5	+	2852	9	NNC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.9298870012683	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTCCATTGTTCTGTG	NA	False	NA	3	True	AATAAA	-12	NA	52898928	52926678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52899311_52907949_52908018_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.6	chr5	+	2993	10	NNC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.3631467056505	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52898928	52926682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52899311_52905710_52905848_52907949_52908018_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25953.7	chr5	+	3048	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	-18	4	-14	-4	multi-exon	FALSE	canonical	0	0	junction_2	68.4301933215499	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTCCATTGTTCTGTG	NA	False	NA	3	True	AATAAA	-12	NA	52898933	52926678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52899311_52900833_52900902_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ES.25954.1	chr5	+	2488	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	1	-4	1	4	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTGTTATTCCTTTT	NA	False	NA	25	True	ATTAAA	-21	NA	52940396	52982011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.10	chr5	+	4541	4	ISM	ENSMUSG00000029179.15	ENSMUST00000157074.6	4194	5	-18	0	14	0	intron_retention	FALSE	canonical	3	102	junction_3	7.48331477354788	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	52940409	52957510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318
ES.25954.11	chr5	+	2821	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	14	2908	14	1479	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTAGAAGCCTCCAAT	NA	False	NA	NA	False	AATAAA	-34	NA	52940409	52978005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
ES.25954.12	chr5	+	3152	13	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	31.2608869924632	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTCAGTTGTTATT	NA	False	NA	19	True	ATTAAA	-15	NA	52940409	52982005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52978156_52981824
ES.25954.13	chr5	+	3840	39	Fusion	ENSMUSG00000029176.14_ENSMUSG00000029179.15	novel	2485	13	NA	NA	15	0	multi-exon	FALSE	canonical	0	0	junction_12	152.560564241788	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52940410	53024084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.14	chr5	+	5406	12	NNC	ENSMUSG00000029179.15	novel	5743	12	NA	NA	15	1	intron_retention	FALSE	non_canonical	0	0	junction_11	31.8433666561813	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCAGTTGTTATTCCT	NA	False	NA	22	True	ATTAAA	-18	NA	52940410	52982008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52976001_52976462_52978035_52981820
ES.25954.15	chr5	+	2391	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-11	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.6435798555416	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGTTATTCCTTTTT	NA	False	NA	26	True	ATTAAA	-22	NA	52940416	52982012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.16	chr5	+	2396	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-11	5	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	31.3840513268436	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGTTATTCCTTTTT	NA	False	NA	26	True	ATTAAA	-22	NA	52940416	52982012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.17	chr5	+	2646	14	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	38.4016456747956	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52940416	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52959956_52960140_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.18	chr5	+	2210	11	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.9263909073747	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52940417	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.19	chr5	+	5825	2	NIC	ENSMUSG00000029179.15	novel	430	4	NA	NA	-9	-6208	intron_retention	FALSE	canonical	3	120	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTAGCCTGCAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	52940418	52947233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52941450_52942439
ES.25954.2	chr5	+	4247	5	FSM	ENSMUSG00000029179.15	ENSMUST00000157074.6	4194	5	-24	-29	8	29	multi-exon	FALSE	canonical	3	102	junction_3	7.15454401062709	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCCCTTCCCTGTG	NA	False	NA	NA	False	TTTAAA	-34	NA	52940403	52957539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923
ES.25954.20	chr5	+	2630	10	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	50.4742936650693	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940425	52982007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52978013_52981818
ES.25954.21	chr5	+	3886	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	30	1827	-2	-1827	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTTCTTTATAAATGGC	NA	False	NA	NA	False	NA	NA	NA	52940425	52979086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
ES.25954.22	chr5	+	2805	15	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	43.4386736370592	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52940426	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52971166_52971434_52971570_52971656_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.23	chr5	+	2268	11	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.3874983158178	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTCAGTTGTTATT	NA	False	NA	19	True	ATTAAA	-15	NA	52940428	52982005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52942439_52942523_52953318_52953595_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980944
ES.25954.24	chr5	+	3795	12	NNC	ENSMUSG00000029179.15	novel	755	8	NA	NA	-3492	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.1008053656262	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52951879	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52952865_52953318_52953595_52953923_52954002_52954798_52955488_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.25	chr5	+	6380	9	ISM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	13015	2	-1961	-2	intron_retention	FALSE	canonical	3	82	junction_3	13.8783779671833	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTCAGTTGTTATT	NA	False	NA	19	True	ATTAAA	-15	NA	52953410	52982005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
ES.25954.26	chr5	+	702	1	Intergenic	novelGene_21578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAATAAATAAATCTGA	NA	False	NA	NA	False	NA	NA	NA	52960865	52961567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_52960900_52961600
ES.25954.27	chr5	+	2466	4	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	11890	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	54.2115198909686	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52973557	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52973580_52975948_52976001_52976462_52977808_52980959
ES.25954.28	chr5	+	7837	2	ISM	ENSMUSG00000029179.15	ENSMUST00000149612.8	755	8	18335	-5479	12039	-2	3prime_fragment	FALSE	canonical	3	117	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTCAGTTGTTATT	NA	False	NA	19	True	ATTAAA	-15	NA	52973706	52982005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_52976001_52976462
ES.25954.3	chr5	+	5729	12	FSM	ENSMUSG00000029179.15	ENSMUST00000031077.13	5743	12	10	4	10	-4	multi-exon	FALSE	canonical	3	82	junction_6	13.7197450763007	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCACTGTGCTCATTC	NA	False	NA	NA	False	ATTAAA	-16	NA	52940405	52980909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
ES.25954.30	chr5	+	2784	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	21	1049	21	6	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATCCTTGTGGAGGAG	NA	False	NA	27	True	AATAAA	-27	NA	52991374	53024090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.31	chr5	+	3766	23	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-44	-1	intron_retention	FALSE	canonical	0	0	junction_10	100.224541294465	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTTCCATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	52991423	53024083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.32	chr5	+	4645	25	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	314	junction_6	50.3485076464261	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTCATACTCTGTTC	NA	False	NA	11	True	AATAAA	-11	NA	52991425	53024074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.33	chr5	+	4603	27	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	314	junction_6	49.3987069519103	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991425	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.34	chr5	+	3619	27	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	314	junction_6	49.3856937337336	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTTCCATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	52991449	53024083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.35	chr5	+	3020	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	96	738	-18	317	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTACTTGTCTCAGTGTG	NA	False	NA	NA	False	TTTAAA	-45	NA	52991449	53024401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.36	chr5	+	4657	26	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	314	junction_6	48.262515475263	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991455	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.37	chr5	+	6601	26	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	314	junction_6	49.2830843190643	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTTCATACTCTG	NA	False	NA	8	True	AATAAA	-8	NA	52991459	53024071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.38	chr5	+	3738	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	113	3	-1	-3	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTAGCGTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	52991466	53025136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.39	chr5	+	2692	28	NNC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	90.1337825980475	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTTCCATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	52991466	53024083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018577_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.4	chr5	+	3964	13	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	12	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	31.465479320819	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGTTATTCCTTTTT	NA	False	NA	26	True	ATTAAA	-22	NA	52940407	52982012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52955488_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ES.25954.40	chr5	+	3740	27	NNC	ENSMUSG00000029176.14	novel	2758	29	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.2988216891586	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACCTAGCGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	52991467	53025134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999137_52999337_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.41	chr5	+	2755	29	FSM	ENSMUSG00000029176.14	ENSMUST00000144574.8	2758	29	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	115.372837278246	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTCTGTTCCATCCTT	NA	False	NA	18	True	AATAAA	-18	NA	52991467	53024081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_52991735_52993019_52993126_52993232_52993306_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.43	chr5	+	2670	27	NNC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.2988216891586	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991481	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999330_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.44	chr5	+	2650	28	NNC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.9985754874259	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991484	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000239_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.46	chr5	+	3543	27	NNC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	22	-3	intron_retention	FALSE	canonical	0	0	junction_9	92.5558842860697	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTCTGTTCCATCCTT	NA	False	NA	18	True	AATAAA	-18	NA	52991489	53024081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53004007_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.49	chr5	+	6210	23	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	25	-1	intron_retention	FALSE	canonical	3	314	junction_6	33.7041393342786	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	52991492	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53006174_53007799_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53018683_53019290_53019472_53019563_53019666_53020928_53021004_53021820_53023360_53023736
ES.25954.5	chr5	+	4124	4	NIC	ENSMUSG00000029179.15	novel	4194	5	NA	NA	12	29	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	46.9207369459982	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCCCCCCTTCCCTGTG	NA	False	NA	NA	False	TTTAAA	-34	NA	52940407	52957539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923
ES.25954.51	chr5	+	2024	22	ISM	ENSMUSG00000029176.14	ENSMUST00000144574.8	2758	29	8693	10	-10	-2	3prime_fragment	FALSE	canonical	3	336	junction_8	47.4531395538245	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTCATACTCTGTTC	NA	False	NA	11	True	AATAAA	-11	NA	53000160	53024074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.52	chr5	+	1486	15	ISM	ENSMUSG00000029176.14	ENSMUST00000144574.8	2758	29	16330	2	313	-2	3prime_fragment	FALSE	canonical	3	336	junction_1	52.1350776975599	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTCTGTTCCATCCTTG	4784	False	NA	19	True	AATAAA	-19	NA	53007797	53024082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.53	chr5	+	5443	8	NIC	ENSMUSG00000029176.14	novel	3854	28	NA	NA	1474	-1	intron_retention	FALSE	canonical	3	364	junction_4	57.2210179738108	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTTCCATCCTTGT	NA	False	NA	20	True	AATAAA	-20	NA	53014162	53024083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ES.25954.54	chr5	+	2382	3	ISM	ENSMUSG00000029176.14	ENSMUST00000145349.5	640	6	1117	-2079	1117	-1	3prime_fragment	FALSE	canonical	3	364	junction_1	41	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATACTCTGTTCC	NA	False	NA	12	True	AATAAA	-12	NA	53019613	53024075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53019666_53020928_53021004_53021820
ES.25954.6	chr5	+	3698	11	NNC	ENSMUSG00000029179.15	novel	5743	12	NA	NA	13	-1237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.8855583703978	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	52940408	52975289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52955488_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52974304
ES.25954.7	chr5	+	2674	11	NIC	ENSMUSG00000029179.15	novel	5743	12	NA	NA	13	1450	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	31.2200256245891	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAATTAAATGCATT	NA	False	NA	NA	False	AATAAA	-5	NA	52940408	52977976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462
ES.25954.8	chr5	+	2512	14	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.1524503466766	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTCAGTTGTTATT	NA	False	NA	19	True	ATTAAA	-15	NA	52940409	52982005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52974131_52974175_52975948_52976001_52976462_52976608_52980959
ES.25954.9	chr5	+	3224	14	NNC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	44.7640758332739	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTCAGTTGTTATTC	NA	False	NA	20	True	ATTAAA	-16	NA	52940409	52982006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52959956_52960140_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52978038_52981818
ES.25955.1	chr5	-	9866	1	Antisense	novelGene_ENSMUSG00000029179.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAAAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	52951439	52941573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_52941600_52951400
ES.25956.1	chr5	-	5932	1	Antisense	novelGene_ENSMUSG00000029179.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCAGGAACTCA	NA	False	NA	NA	False	NA	NA	NA	52965674	52959742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_52959700_52965700
ES.25957.1	chr5	-	2851	1	Antisense	novelGene_ENSMUSG00000029176.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAAGTTTTGAGGACG	NA	False	NA	NA	False	NA	NA	NA	52996969	52994118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_52994100_52997000
ES.25957.2	chr5	-	2581	1	Antisense	novelGene_ENSMUSG00000029176.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAAACA	-36	NA	52996969	52994388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_52994400_52997000
ES.25958.1	chr5	-	161	1	Intergenic	novelGene_21579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	53136379	53136218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_53136200_53136400
ES.25959.1	chr5	+	175	1	Intergenic	novelGene_21580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATAGTACCCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	53187670	53187845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_53187700_53187800
ES.2596.1	chr10	+	193	1	Intergenic	novelGene_1966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTTGTGATTG	NA	False	NA	NA	False	NA	NA	NA	36892786	36892979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_36892800_36893000
ES.25960.1	chr5	+	955	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	-30	-3	25	3	multi-exon	FALSE	canonical	3	318	junction_1	5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTGTACTGTTTTT	3377	False	NA	16	True	ATTAAA	-17	NA	53424449	53435885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53424701_53434484_53434542_53435238
ES.25960.2	chr5	+	5875	3	FSM	ENSMUSG00000106981.2_ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	16	-4969	16	0	multi-exon	FALSE	canonical	3	318	junction_1	5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTCACCAGTTAATTGC	3423	False	NA	NA	False	ATTAAA	-15	NA	53424495	53440851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53424701_53434484_53434542_53435238
ES.25960.3	chr5	+	2105	1	FSM	ENSMUSG00000061461.12	ENSMUST00000204839.2	2076	1	-29	0	-16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	3430	False	NA	NA	False	NA	NA	NA	53424502	53426607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53424500_53426600
ES.25960.4	chr5	+	1190	4	FSM	ENSMUSG00000061461.12	ENSMUST00000204218.3	1231	4	44	-3	5	3	multi-exon	FALSE	canonical	0	0	junction_2	153.686549689801	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTGTACTGTTTTT	3451	False	NA	16	True	ATTAAA	-17	NA	53424523	53435885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53424701_53425364_53425674_53434484_53434542_53435238
ES.25960.5	chr5	+	2776	2	FSM	ENSMUSG00000061461.12	ENSMUST00000204089.2	212	2	-2051	-513	-2051	-1	multi-exon	FALSE	canonical	3	328	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGGTGTGTACTGT	NA	False	NA	12	True	ATTAAA	-13	NA	53432408	53435881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53434542_53435238
ES.25961.1	chr5	+	211	1	Intergenic	novelGene_21581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGGGCATTGTTGAGA	NA	False	NA	NA	False	ATTAAA	-10	NA	53663868	53664079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_53663900_53664100
ES.25962.1	chr5	-	1291	3	NNC	ENSMUSG00000107111.2	novel	268	3	NA	NA	-154	976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTCAGTTTTGTTT	2743	False	NA	NA	False	AGTAAA	-29	NA	53704818	53702716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_53703801_53703968_53704080_53704722
ES.25962.2	chr5	-	485	3	NNC	ENSMUSG00000107111.2	novel	268	3	NA	NA	222	169	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATGCATTTAATCCCA	3119	False	NA	NA	False	NA	NA	NA	53704442	53703523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_53703801_53703968_53704074_53704339
ES.25963.1	chr5	+	4035	11	NNC	ENSMUSG00000039191.13	novel	678	4	NA	NA	-3976	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	150.273084749066	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTCCCCCGTTACT	NA	False	NA	38	True	AATATA	-11	NA	53709071	53813511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53709114_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.10	chr5	+	3961	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-23	1314	-23	-93	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAATAGTGTGAACAGAT	NA	False	NA	28	True	AATAAA	-36	NA	53713152	53813386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.11	chr5	+	5321	12	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	188.470924166563	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGATGTCTTCTGTGG	NA	False	NA	14	True	AATAAA	-20	NA	53713158	53814702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53758042_53758093_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.13	chr5	+	3932	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-15	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	183.826575880638	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTACCACAGA	NA	False	NA	13	True	AATAAA	-21	NA	53713160	53813371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810652
ES.25963.14	chr5	+	7303	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-14	-2037	-14	2033	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTGTTTCTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	53713161	53816737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.15	chr5	+	2829	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-14	2437	-14	-1216	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTCTTTGCCCCTTT	NA	False	NA	NA	False	TATAAA	-25	NA	53713161	53812263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.16	chr5	+	4004	12	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-14	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.446409762485	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCAGACTCCTACCACA	NA	False	NA	11	True	AATAAA	-19	NA	53713161	53813369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784728_53784764_53793303_53793400_53794859_53794933_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.17	chr5	+	5165	10	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	192.949619215886	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53713161	53814703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810646
ES.25963.18	chr5	+	4065	10	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-14	124	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	192.949619215886	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTGGCTGTATTTT	NA	False	NA	130	True	NA	NA	NA	53713161	53813603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810646
ES.25963.19	chr5	+	5257	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	183.826575880638	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCATTGTAGATGTCT	NA	False	NA	7	True	AATAAA	-13	NA	53713161	53814695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810524_53810646
ES.25963.2	chr5	+	4379	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-225	1098	-97	123	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTGGCTGTATTT	NA	False	NA	129	True	NA	NA	NA	53712950	53813602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.20	chr5	+	5408	12	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	208.420585585656	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53713161	53814700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53803969_53804112_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.22	chr5	+	3982	12	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-11	-110	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	188.470924166563	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCAGACTCCTACCACA	NA	False	NA	11	True	AATAAA	-19	NA	53713164	53813369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53758042_53758093_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.23	chr5	+	2755	1	FSM	ENSMUSG00000039191.13	ENSMUST00000201721.2	1519	1	117	-1353	-11	1353	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATTTATTCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	53713164	53715919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713200_53715900
ES.25963.26	chr5	+	8315	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	1	2030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	185.849966370726	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCATTTGTTTCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	53713176	53816734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53809157_53809252_53810105_53810423_53810528_53810646
ES.25963.27	chr5	+	5215	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	185.849966370726	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53713189	53814703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808827_53809978_53810105_53810423_53810528_53810646
ES.25963.28	chr5	+	5046	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	185.849966370726	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAATTTCAATATATGA	NA	False	NA	11	True	ATTAAA	-22	NA	53713195	53813484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53809157_53809252_53810105_53810423_53810528_53810646
ES.25963.29	chr5	+	5130	10	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	23	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	197.020648162747	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTGTAGATGTCTTC	NA	False	NA	9	True	AATAAA	-15	NA	53713198	53814697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53784724_53784764_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.31	chr5	+	4804	12	NNC	ENSMUSG00000039191.13	novel	5459	11	NA	NA	-703	-247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.745817626885	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCTCATTTCGGTTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	53746852	53813232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53747829_53776800_53776915_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.32	chr5	+	5045	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	-691	1105	-691	120	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGTGTGTGGCTGTA	NA	False	NA	126	True	NA	NA	NA	53746864	53813599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.33	chr5	+	4181	12	NNC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	-647	123	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	164.342416168396	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTGGCTGTATTT	NA	False	NA	129	True	NA	NA	NA	53746908	53813602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53746921_53747981_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.34	chr5	+	5463	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	-3	-1	-3	1	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTCTGTGGGAT	NA	False	NA	17	True	AATAAA	-23	NA	53747552	53814705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.35	chr5	+	4008	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	117	1334	-37	-109	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGACTCCTACCACAG	NA	False	NA	12	True	AATAAA	-20	NA	53747672	53813370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.36	chr5	+	5664	10	NIC	ENSMUSG00000039191.13	novel	5459	11	NA	NA	-8	12	intron_retention	FALSE	canonical	3	36	junction_1	142.727401402503	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATATGATGTACAG	NA	False	NA	18	True	ATTAAA	-29	NA	53747701	53813491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.37	chr5	+	3834	10	NIC	ENSMUSG00000039191.13	novel	5459	11	NA	NA	-43	-90	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	202.39516414464	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGTGTGAACAGATATG	NA	False	NA	31	True	AATAAA	-39	NA	53747769	53813389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53747829_53784724_53784764_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.38	chr5	+	4243	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	-16	1213	-16	12	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATATGATGTACAG	NA	False	NA	18	True	ATTAAA	-29	NA	53747796	53813491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.39	chr5	+	5410	12	NNC	ENSMUSG00000039191.13	novel	5459	11	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.745817626885	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGATGTCTTCTGTGGG	NA	False	NA	15	True	AATAAA	-21	NA	53747796	53814703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53747829_53776721_53776915_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.4	chr5	+	4164	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-125	1213	3	8	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	14	True	ATTAAA	-25	NA	53713050	53813487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.40	chr5	+	3992	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	250	1217	-7	8	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	14	True	ATTAAA	-25	NA	53747805	53813487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.41	chr5	+	5533	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	2	-95	2	95	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGCTAGGATTTTACCT	NA	False	NA	111	True	ATTAAA	-16	NA	53747814	53814799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.43	chr5	+	5332	10	NIC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	180.950576432105	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTAGATGTCTTCTG	NA	False	NA	11	True	AATAAA	-17	NA	53747819	53814699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53748067_53784724_53784764_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.44	chr5	+	2934	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	7	2499	7	-1274	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTAGAGACTGATAGT	NA	False	NA	NA	False	AATAAA	-24	NA	53747819	53812205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.45	chr5	+	4285	12	NNC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.019964646325	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAATTTCAATATATG	NA	False	NA	10	True	ATTAAA	-21	NA	53747819	53813483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53748067_53784724_53784764_53793303_53793400_53794859_53794933_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.46	chr5	+	3955	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	11	1474	11	-249	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATCTCATTTCGGTTC	NA	False	NA	NA	False	ATTAAA	-24	NA	53747823	53813230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.47	chr5	+	4316	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	20	1104	20	121	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGTGTGTGGCTGTAT	NA	False	NA	127	True	NA	NA	NA	53747832	53813600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.48	chr5	+	4313	12	NNC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	48	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	190.556167290807	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTCCCCCGTTACT	NA	False	NA	38	True	AATATA	-11	NA	53747860	53813511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53748067_53776800_53776915_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.49	chr5	+	4065	10	NIC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	54	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	177.093474655144	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTCAATATATGATGT	NA	False	NA	14	True	ATTAAA	-25	NA	53747866	53813487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810646
ES.25963.5	chr5	+	5454	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-104	-98	24	94	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGGCTAGGATTTTACC	NA	False	NA	110	True	ATTAAA	-15	NA	53713071	53814798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.50	chr5	+	7268	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	204	-2032	204	2032	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTTGTTTCTTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	53748016	53816736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.51	chr5	+	3905	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	220	1315	220	-90	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGTGTGAACAGATATG	NA	False	NA	31	True	AATAAA	-39	NA	53748032	53813389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.52	chr5	+	3981	10	NIC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	220	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	158.400180820448	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGGAGTCTTGTCCCC	NA	False	NA	31	True	ATTAAA	-42	NA	53748032	53813504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53748067_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.53	chr5	+	5214	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	220	6	220	-2	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGTAGATGTCTTCT	NA	False	NA	10	True	AATAAA	-16	NA	53748032	53814698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.55	chr5	+	5208	11	NNC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	170.537385930476	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53748033	53814700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807011_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.56	chr5	+	2072	12	NNC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	222	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	164.342416168396	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTGTAGATGTCTTC	NA	False	NA	9	True	AATAAA	-15	NA	53748034	53814697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646_53811024_53814162
ES.25963.58	chr5	+	3921	12	NIC	ENSMUSG00000039191.13	novel	5440	11	NA	NA	234	-110	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	189.235521624847	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCAGACTCCTACCACA	NA	False	NA	11	True	AATAAA	-19	NA	53748046	53813369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53748067_53758042_53758093_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.59	chr5	+	6504	11	FSM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	-227	-1316	-227	91	multi-exon	FALSE	canonical	0	0	junction_1	150.273084749066	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGGGCTAGGATTTT	NA	False	NA	107	True	ATTAAA	-12	NA	53748095	53814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53749323_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.6	chr5	+	4124	11	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	185.272879828646	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGTAAATCAATTTCAA	NA	False	NA	4	True	ATTAAA	-15	NA	53713074	53813477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803217_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.60	chr5	+	157	1	Intergenic	novelGene_21582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	53752819	53752976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_53752800_53753000
ES.25963.61	chr5	+	5274	12	NNC	ENSMUSG00000039191.13	novel	5485	13	NA	NA	9747	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	220.278936617543	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATTGTAGATGTCTT	NA	False	NA	8	True	AATAAA	-14	NA	53758069	53814696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53758093_53784724_53784764_53793303_53793400_53794859_53794933_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.62	chr5	+	3865	10	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	36400	98	2304	-98	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCACAGAATAGTGTGAA	NA	False	NA	23	True	AATAAA	-31	NA	53784722	53813381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.63	chr5	+	5185	10	ISM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	36911	2	2305	2	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAGATGTCTTCTGTGG	NA	False	NA	14	True	AATAAA	-20	NA	53784723	53814702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.64	chr5	+	3966	10	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	36401	-4	2305	4	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAATTTCAATATATG	NA	False	NA	10	True	ATTAAA	-21	NA	53784723	53813483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.65	chr5	+	2492	10	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	36401	1470	2305	-1470	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAATATCATGCGAAT	NA	False	NA	NA	False	NA	NA	NA	53784723	53812009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.66	chr5	+	3707	10	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	36401	255	2305	-255	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTATATCTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	53784723	53813224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.67	chr5	+	4082	10	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	36401	-120	2305	120	3prime_fragment	FALSE	canonical	3	436	junction_1	37.5055551440939	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGTGTGTGGCTGTA	NA	False	NA	126	True	NA	NA	NA	53784723	53813599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.68	chr5	+	3951	8	ISM	ENSMUSG00000039191.13	ENSMUST00000201883.4	4961	11	51042	-124	3391	124	3prime_fragment	FALSE	canonical	3	443	junction_6	30.6167887784144	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTGGCTGTATTTT	NA	False	NA	130	True	NA	NA	NA	53799364	53813603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.69	chr5	+	6425	9	NNC	ENSMUSG00000039191.13	novel	678	4	NA	NA	-1417	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.786744554634	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53801662	53814700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53802111_53802216_53803387_53806712_53806851_53807004_53807118_53807539_53807641_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.7	chr5	+	3844	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	-61	1469	-61	-248	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATTTCGGTTCT	NA	False	NA	NA	False	ATTAAA	-25	NA	53713114	53813231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.70	chr5	+	4985	8	NNC	ENSMUSG00000039191.13	novel	678	4	NA	NA	-1287	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	177.963766089663	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATATGATGTACAG	NA	False	NA	18	True	ATTAAA	-29	NA	53801792	53813491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53802111_53802216_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25963.71	chr5	+	7957	6	NIC	ENSMUSG00000039191.13	novel	5459	11	NA	NA	-591	2030	intron_retention	FALSE	canonical	3	487	junction_4	22.4374686629308	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCATTTGTTTCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	53802488	53816734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810528_53810646
ES.25963.72	chr5	+	3316	8	NNC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	130	-247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	177.963766089663	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCTCATTTCGGTTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	53803209	53813232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646_53810767_53810865
ES.25963.73	chr5	+	5078	3	ISM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	61369	7	6102	-3	3prime_fragment	FALSE	canonical	3	443	junction_1	39	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTGTAGATGTCTTC	NA	False	NA	9	True	AATAAA	-15	NA	53809181	53814697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53810105_53810423_53810528_53810646
ES.25963.74	chr5	+	3376	1	ISM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	97873	276	7969	-276	mono-exon	FALSE	NA	NA	NA	NA	NA	762	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGTCCTGTGTCAGTC	1391	False	NA	NA	False	GATAAA	-11	NA	53811048	53814424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53811000_53814400
ES.25963.9	chr5	+	5411	12	NIC	ENSMUSG00000039191.13	novel	5252	11	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	190.745817626885	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53713130	53814700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53713246_53723441_53723556_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ES.25964.1	chr5	-	6284	1	Antisense	novelGene_ENSMUSG00000039191.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACCAAAGCAGTA	NA	False	NA	NA	False	NA	NA	NA	53760014	53753730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_53753700_53760000
ES.25964.2	chr5	-	1892	1	Antisense	novelGene_ENSMUSG00000039191.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	53760014	53758122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_53758100_53760000
ES.25965.1	chr5	+	174	1	Intergenic	novelGene_21583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	53824307	53824481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_53824300_53824500
ES.25966.1	chr5	-	236	1	Intergenic	novelGene_21584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAAGGCACATGGGA	NA	False	NA	NA	False	NA	NA	NA	53873399	53873163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_53873200_53873400
ES.25967.1	chr5	+	2081	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	-36	228	-15	-1	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTTGTCAGTTTGTAA	NA	False	NA	7	True	AATAAA	-17	NA	53966932	54061079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.10	chr5	+	4708	21	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.1231210302975	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAGCTTCTTGTCAGT	NA	False	NA	1	True	AATAAA	-11	NA	53966996	54061073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54049447_54054332_54054449_54058918_54058990_54060673
ES.25967.11	chr5	+	1919	22	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	2	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.8468323809108	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAAGAAGTTTTCACT	NA	False	NA	8	True	AATAAA	-22	NA	53966997	54060874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53988722_53988831_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.12	chr5	+	1555	11	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	2	7565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.2594744806517	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATATGTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	53966997	54014841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54007157_54007293_54014189
ES.25967.13	chr5	+	2228	21	FSM	ENSMUSG00000039178.10	ENSMUST00000201958.4	2242	21	15	-1	-10	1	multi-exon	FALSE	canonical	1	1	junction_3	19.8148303045976	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGATATCTCTAATAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	53967010	54061306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53967201_53986691_53986765_53987796_53987841_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.14	chr5	+	4464	20	NIC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	66	junction_7	7.57565718056536	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCTTCTTGTCAGTT	NA	False	NA	2	True	AATAAA	-12	NA	53967013	54061074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_53967201_53986691_53986765_53987796_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.15	chr5	+	2209	20	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.8483510046284	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGATATCTCTAATAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	53967023	54061306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54044670_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.16	chr5	+	5663	1	Intergenic	novelGene_21585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53980907	53986570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_53980900_53986600
ES.25967.17	chr5	+	3500	18	ISM	ENSMUSG00000039178.10	ENSMUST00000201958.4	2242	21	21737	-1	-1403	1	3prime_fragment	FALSE	canonical	3	66	junction_5	7.63528505392374	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGATATCTCTAATAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	53988732	54061306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.18	chr5	+	5805	1	NIC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	15048	7565	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATATGTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	54009036	54014841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_54009000_54014800
ES.25967.19	chr5	+	7983	3	ISM	ENSMUSG00000039178.10	ENSMUST00000201958.4	2242	21	80167	6	-1283	-6	3prime_fragment	FALSE	canonical	3	86	junction_2	2	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTATACAGATATCTC	1248	False	NA	NA	False	ATTAAA	-14	NA	54047162	54061299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_54054449_54058918_54058990_54060673
ES.25967.2	chr5	+	1832	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	8	433	8	-206	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAAGAAGTTTTCACT	NA	False	NA	8	True	AATAAA	-22	NA	53966976	54060874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.20	chr5	+	5527	2	NIC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	5651	0	intron_retention	FALSE	canonical	3	86	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGATATCTCTAATAATC	159	False	NA	NA	False	ATTAAA	-22	NA	54054096	54061307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_54058990_54060673
ES.25967.4	chr5	+	3694	17	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	-2	-17223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.7184458976092	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTGTGTTTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	53966987	54043857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987898_53990311_53990388_53992513_53992589_53993939_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54041447
ES.25967.5	chr5	+	1664	20	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	0	-3990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.7977997983992	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGGATGCTGAGTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	53966989	54057090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54056973
ES.25967.7	chr5	+	1358	14	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	-1	7565	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	34.8884952468821	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTATATGTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	53966994	54014841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987898_53988730_53988831_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54014636
ES.25967.8	chr5	+	3228	21	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.1656511936409	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGATATCTCTAATAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	53966996	54061306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53988831_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003546_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ES.25967.9	chr5	+	1199	13	NNC	ENSMUSG00000039178.10	novel	2273	21	NA	NA	1	7563	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	24.4369938140244	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTATGTATATGTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	53966996	54014839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54014636
ES.25968.1	chr5	+	4042	1	FSM	ENSMUSG00000107182.2	ENSMUST00000201536.2	4055	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTGTGCCTTTGGTT	8581	False	NA	NA	False	NA	NA	NA	54062518	54066560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54062500_54066600
ES.25969.1	chr5	+	3241	12	NNC	ENSMUSG00000039156.20	novel	2338	6	NA	NA	-21973	-228	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.7004215219003	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTGTGCTGATTTTTG	NA	False	NA	16	True	AATAAA	-18	NA	54133867	54277048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_54134062_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.10	chr5	+	1853	1	Intergenic	novelGene_21591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGAAATTCACTTAACA	NA	False	NA	NA	False	NA	NA	NA	54225549	54227402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_54225500_54227400
ES.25969.11	chr5	+	178	1	Intergenic	novelGene_21592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54237944	54238122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_54237900_54238100
ES.25969.2	chr5	+	3713	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-130	1351	-130	-228	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTGTGCTGATTTTTG	NA	False	NA	16	True	AATAAA	-18	NA	54155710	54277048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.3	chr5	+	5048	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-108	-6	-108	6	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTTGCTAGTTATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	54155732	54278405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.4	chr5	+	3926	13	FSM	ENSMUSG00000039156.20	ENSMUST00000201469.4	4892	13	-158	1124	-92	-1	multi-exon	FALSE	canonical	3	11	junction_9	82.5821140172347	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTGTTGAATGAGTTT	NA	False	NA	NA	False	TATAAA	-15	NA	54155748	54277275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267457_54267482_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.5	chr5	+	3844	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	-33	1123	-33	0	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	54155807	54277276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.6	chr5	+	3522	13	NNC	ENSMUSG00000039156.20	novel	4892	13	NA	NA	4	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	66.9806667794687	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGTGTGGGGTTGTGCT	NA	False	NA	8	True	AATAAA	-10	NA	54155844	54277040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267115_54267163_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.7	chr5	+	3562	13	FSM	ENSMUSG00000039156.20	ENSMUST00000201469.4	4892	13	-29	1359	-29	-236	multi-exon	FALSE	canonical	3	11	junction_9	82.5821140172347	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGTGTGGGGTTGTGCT	NA	False	NA	8	True	AATAAA	-10	NA	54155877	54277040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267457_54267482_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.8	chr5	+	4168	11	NIC	ENSMUSG00000039156.20	novel	4892	13	NA	NA	8	-235	intron_retention	FALSE	canonical	3	195	junction_6	22.8317761026163	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGGGGTTGTGCTG	NA	False	NA	9	True	AATAAA	-11	NA	54155914	54277041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267980_54268213_54268453_54273260_54273535_54275613
ES.25969.9	chr5	+	2679	1	Intergenic	novelGene_21590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGATTCTCGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	54215914	54218593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_54215900_54218600
ES.2597.1	chr10	+	210	1	Intergenic	novelGene_1967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	6407	False	NA	NA	False	NA	NA	NA	37003459	37003669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_37003500_37003700
ES.25970.1	chr5	-	1704	10	Intergenic	novelGene_21587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGCGCAGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	54268428	54155990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_54156374_54210714_54210847_54232619_54232735_54259914_54260027_54260912_54261031_54261734_54261911_54262559_54262738_54267041_54267218_54267880_54267980_54268213
ES.25970.2	chr5	-	2759	7	Intergenic	novelGene_21586	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGCGCAGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	54264283	54155990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_54156374_54210714_54210847_54232619_54232735_54259914_54260027_54260912_54261031_54261734_54261911_54262560
ES.25970.3	chr5	-	1934	11	Intergenic	novelGene_21588	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGCGCAGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	54273471	54155990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_54156374_54210714_54210847_54232619_54232735_54259914_54260026_54260912_54261031_54261734_54261911_54262560_54262738_54267041_54267211_54267876_54267980_54268213_54268450_54273257
ES.25970.4	chr5	-	4624	10	Intergenic	novelGene_21589	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGCGCAGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	54275926	54155990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_54156374_54210714_54210847_54232619_54232735_54259914_54260027_54260912_54261031_54261734_54261911_54262560_54262738_54267041_54267211_54267876_54268450_54273257
ES.25971.1	chr5	-	127	1	Intergenic	novelGene_21593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAATAGAGAA	NA	False	NA	NA	False	AATAAA	-11	NA	54809039	54808912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_54808900_54809000
ES.25972.1	chr5	+	177	1	Intergenic	novelGene_21594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	55346708	55346885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_55346700_55346900
ES.25973.1	chr5	+	3727	1	Intergenic	novelGene_21595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAGTTAGACTC	NA	False	NA	NA	False	NA	NA	NA	55776657	55780384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_55776700_55780400
ES.25974.1	chr5	-	134	1	Intergenic	novelGene_21596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60242851	60242717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_60242700_60242900
ES.25975.1	chr5	-	176	1	Intergenic	novelGene_21597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAATAAAATACTA	NA	False	NA	NA	False	NA	NA	NA	60968524	60968348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_60968300_60968500
ES.25976.1	chr5	-	178	1	Intergenic	novelGene_21598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	61590483	61590305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_61590300_61590500
ES.25977.1	chr5	+	176	1	Intergenic	novelGene_21599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTAAATTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	61656749	61656925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_61656700_61656900
ES.25978.1	chr5	+	4906	1	Intergenic	novelGene_21600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61924260	61929166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_61924300_61929200
ES.25979.1	chr5	-	4682	1	Intergenic	novelGene_21601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGTACCTTTGCAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	61935181	61930499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_61930500_61935200
ES.25979.2	chr5	-	2510	1	Intergenic	novelGene_21602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTATTATTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	61935021	61932511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_61932500_61935000
ES.2598.1	chr10	-	4213	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-27	-138	-27	138	multi-exon	FALSE	canonical	3	339	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACTAAAGTAGGGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	37014943	37009232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.2598.10	chr10	-	2160	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-6	1894	-6	-1894	multi-exon	FALSE	canonical	3	339	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCAGGGTGTTTTTAAC	NA	False	NA	NA	False	AATAAA	-16	NA	37014922	37011264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.2598.11	chr10	-	1640	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	215	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAATAAAAAC	NA	False	NA	-31	True	NA	NA	NA	37014701	37011466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_37012203_37012299_37012932_37014429
ES.2598.12	chr10	-	1921	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	31	2096	31	-2096	multi-exon	FALSE	canonical	3	339	junction_1	0	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAATAAAAAC	NA	False	NA	-31	True	NA	NA	NA	37014885	37011466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.2598.13	chr10	-	1420	1	Genic_Genomic	ENSMUSG00000069662.6	novel	NA	NA	NA	NA	-27	-4153	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37014943	37013523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_37013500_37014900
ES.2598.2	chr10	-	4093	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-42	-3	-42	3	multi-exon	FALSE	canonical	3	339	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGTGTTATTAAGTCTG	NA	False	NA	0	True	AATAAA	-19	NA	37014958	37009367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.2598.3	chr10	-	2697	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	-79	1430	-79	-1430	multi-exon	FALSE	canonical	3	339	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTCTGAGGCTGA	NA	False	NA	NA	False	AATAAA	-31	NA	37014995	37010800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.2598.4	chr10	-	4106	1	Genic_Genomic	ENSMUSG00000069662.6	novel	NA	NA	NA	NA	-6	-1446	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGTTGTGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	37014922	37010816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_37010800_37014900
ES.2598.6	chr10	-	1491	2	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	15	-1446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTGTTGTGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	37014901	37010816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_37012107_37014700
ES.2598.7	chr10	-	2471	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	0	-1447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.5	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAATTTGTTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37014916	37010817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_37012170_37012299_37012932_37014429
ES.2598.8	chr10	-	2262	3	NNC	ENSMUSG00000069662.6	novel	4048	2	NA	NA	-5	-1477	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169.5	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAAAAAAATAAATGT	NA	False	NA	NA	False	NA	NA	NA	37014921	37010847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_37012149_37012462_37012932_37014429
ES.2598.9	chr10	-	2416	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	7	1625	7	-1625	multi-exon	FALSE	canonical	3	339	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTTGTGTAGCATCT	NA	False	NA	-2	True	AATAAA	-23	NA	37014909	37010995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_37012932_37014429
ES.25980.1	chr5	+	4020	1	Antisense	novelGene_ENSMUSG00000105694.2_AS_novelGene_ENSMUSG00000037999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAGAAAAAAAAAGAAA	4001	False	NA	NA	False	NA	NA	NA	62770334	62774354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_62770300_62774400
ES.25981.1	chr5	+	268	1	Intergenic	novelGene_21603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAAAAGAGT	9050	False	NA	NA	False	TATAAA	-34	NA	62889082	62889350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_62889100_62889400
ES.25982.1	chr5	+	1428	1	Intergenic	novelGene_21604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGTGACAGGCCGAGG	NA	False	NA	NA	False	NA	NA	NA	62920629	62922057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_62920600_62922100
ES.25983.1	chr5	-	7594	33	FSM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	-288	0	-249	0	multi-exon	FALSE	canonical	1	2	junction_29	4.00183063578408	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTCTTGTGTCTCTTT	NA	False	NA	3	True	ATTAAA	-24	NA	62923751	62759787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ES.25983.2	chr5	-	3540	13	NIC	ENSMUSG00000037999.14	novel	7306	33	NA	NA	-7897	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	5.07444578254611	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTCTTGTGTCTCTTT	NA	False	NA	3	True	ATTAAA	-24	NA	62811481	62759787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62800137_62800286_62803525_62803632_62807031_62807245_62811388
ES.25983.5	chr5	-	7336	33	NNC	ENSMUSG00000037999.14	novel	7306	33	NA	NA	-32	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	4.39448784700788	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAATATGCCTCTTGTG	NA	False	NA	-4	True	ATTAAA	-17	NA	62923534	62759794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826535_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ES.25983.6	chr5	-	2702	1	FSM	ENSMUSG00000105707.2	ENSMUST00000196539.2	3309	1	832	-225	832	225	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAGGATGGGAGATTTT	NA	False	NA	NA	False	NA	NA	NA	62816618	62813916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_62813900_62816600
ES.25983.7	chr5	-	8259	20	NNC	ENSMUSG00000037999.14	novel	320	3	NA	NA	-25	13088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.4078750981495	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGTCTTTCCATGGC	NA	False	NA	NA	False	AAGAAA	-1	NA	62923527	62821512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_62826049_62826098_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ES.25983.8	chr5	-	5505	10	NNC	ENSMUSG00000037999.14	novel	413	2	NA	NA	-217	-11004	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.18403786305838	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGTTCACACTGAAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	62923719	62845604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_62848634_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ES.25983.9	chr5	-	3653	6	ISM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	-36	126309	3	20542	5prime_fragment	FALSE	canonical	1	2	junction_2	4.06939798987516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGTAGTATGGAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	62923499	62886096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ES.25984.1	chr5	+	3180	1	Intergenic	novelGene_21605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	63135390	63138570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_63135400_63138600
ES.25985.1	chr5	+	172	1	Intergenic	novelGene_21606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	63402353	63402525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_63402400_63402500
ES.25986.1	chr5	-	6232	2	Intergenic	novelGene_21607	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATTTTAATTCACTAA	NA	False	NA	NA	False	NA	NA	NA	63754542	63748104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_63754197_63754402
ES.25987.1	chr5	+	181	1	Intergenic	novelGene_21608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACATTGAGAC	NA	False	NA	NA	False	NA	NA	NA	63770975	63771156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_63771000_63771200
ES.25988.1	chr5	+	183	1	Intergenic	novelGene_21609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAATGAACT	NA	False	NA	NA	False	NA	NA	NA	63803305	63803488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_63803300_63803500
ES.25989.1	chr5	+	2367	4	FSM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	-360	1	-360	-1	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGTATATGTGTCTCC	1425	False	NA	NA	False	ATTAAA	-21	NA	63969345	64056967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_63969939_64033792_64033843_64053772_64053827_64055297
ES.25989.2	chr5	+	2334	1	Intergenic	novelGene_21610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATACGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	64009581	64011915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_64009600_64011900
ES.2599.1	chr10	+	1864	3	FSM	ENSMUSG00000046463.6	ENSMUST00000217338.2	337	3	-7	-1520	-7	801	multi-exon	FALSE	canonical	3	7	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATTTGTGATTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	37017077	37028112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_37017182_37024872_37025003_37026482
ES.2599.2	chr10	+	1055	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1336	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCTTGGTCATGGT	NA	False	NA	3	True	NA	NA	NA	37018420	37027310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_37018518_37024872_37025003_37026482
ES.2599.3	chr10	+	1669	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1384	661	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATAATTTATAATAAT	NA	False	NA	NA	False	AATAAA	-8	NA	37018468	37027972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_37018518_37024872_37025003_37026482
ES.25990.1	chr5	+	8159	2	Antisense	novelGene_ENSMUSG00000047881.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64090649	64099892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_64091617_64092700
ES.25990.2	chr5	+	2599	1	Antisense	novelGene_ENSMUSG00000047881.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCCTGTGATTTGTCAG	3722	False	NA	NA	False	NA	NA	NA	64096720	64099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_64096700_64099300
ES.25991.1	chr5	-	2466	5	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	3623	21145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.152485105221	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGAGTGCTATGAAAT	9045	False	NA	NA	False	NA	NA	NA	64084497	64045094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64045122_64058111_64058154_64066402_64068495_64082077_64082217_64084331
ES.25991.11	chr5	-	3032	7	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	19	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.410002008271	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATGAGCGACAT	NA	False	NA	-22	True	AATAAA	-14	NA	64126221	64066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093425_64095148_64095377_64125988
ES.25991.12	chr5	-	3378	4	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	260.431692899821	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATGAGCGACAT	5408	False	NA	-22	True	AATAAA	-14	NA	64088134	64066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087210
ES.25991.13	chr5	-	2751	6	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-1836	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	261.638376390009	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATGAGCGACAT	3449	False	NA	-22	True	AATAAA	-14	NA	64090093	64066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64083301_64083364_64084331_64084569_64087820_64087879_64089916
ES.25991.14	chr5	-	2560	5	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-112	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	238.249213010243	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGAATGAGCGACAT	5173	False	NA	-22	True	AATAAA	-14	NA	64088369	64066416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64088321
ES.25991.15	chr5	-	3076	7	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	18	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	196.667867227974	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTTGAATGAGCGACA	NA	False	NA	-23	True	AATAAA	-13	NA	64126222	64066417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125957
ES.25991.17	chr5	-	3134	8	NNC	ENSMUSG00000047881.15	novel	3093	8	NA	NA	19	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	244.277861193739	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGCTTGAATGAGCGAC	NA	False	NA	-24	True	AATAAA	-12	NA	64126221	64066418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068492_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64097011_64097106_64125988
ES.25991.19	chr5	-	5133	6	NIC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	24	-31	intron_retention	FALSE	canonical	3	376	junction_4	60.8558953594473	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGCATTAAACC	NA	False	NA	-44	True	NA	NA	NA	64126216	64066438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_64068495_64082077_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.2	chr5	-	2584	1	Intergenic	novelGene_21611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACCATTTCCCTTGGT	NA	False	NA	NA	False	ACTAAA	-22	NA	64048649	64046065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64046100_64048600
ES.25991.20	chr5	-	6009	5	NIC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-7086	-31	intron_retention	FALSE	canonical	3	376	junction_4	73.7919372289412	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGCATTAAACC	NA	False	NA	-44	True	NA	NA	NA	64095343	64066438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_64068495_64082077_64082217_64084331_64087879_64093365_64093438_64095148
ES.25991.21	chr5	-	2959	7	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	0	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	196.667867227974	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGCATTAAACC	NA	False	NA	-44	True	NA	NA	NA	64126182	64066438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64126013
ES.25991.22	chr5	-	2645	5	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-1814	-31	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	234.788601725041	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGCATTAAACC	3471	False	NA	-44	True	NA	NA	NA	64090071	64066438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64089916
ES.25991.23	chr5	-	2952	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	9	280	9	-112	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCCAGTGTCA	NA	False	NA	-125	True	AAAACA	-16	NA	64126231	64066519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.25	chr5	-	2730	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	10	501	10	-333	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACACATAAGCTTTGTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	64126230	64066740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.26	chr5	-	2668	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	-47	620	-47	-452	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAAGATATTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	64126287	64066859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.29	chr5	-	2238	5	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	-1861	-485	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	234.788601725041	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAGCAATAAAAAAAAACA	3424	False	NA	NA	False	NA	NA	NA	64090118	64066892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64089916
ES.25991.3	chr5	-	3027	7	NNC	ENSMUSG00000047881.15	novel	490	5	NA	NA	1	20118	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	189.183112354142	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTCTCTTGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	64126239	64046121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64048164_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.31	chr5	-	2471	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	15	755	15	-587	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATGAC	NA	False	NA	NA	False	AAAAAG	-13	NA	64126225	64066994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.32	chr5	-	161	1	Intergenic	novelGene_21612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	64103480	64103319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64103300_64103500
ES.25991.33	chr5	-	4590	1	Intergenic	novelGene_21613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCCCGCAAAATAATAACT	NA	False	NA	NA	False	NA	NA	NA	64114416	64109826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64109800_64114400
ES.25991.4	chr5	-	6144	8	NNC	ENSMUSG00000047881.15	novel	3093	8	NA	NA	20	3557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.868303230851	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGTGCCTCTGTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	64126220	64062682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64063726_64064359_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.5	chr5	-	3240	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	2	-1	2	1	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCAGTCTGCTAATCTT	NA	False	NA	NA	False	NA	NA	NA	64126238	64066238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.6	chr5	-	3237	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	-145	149	-145	19	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTTCTTAAGTCTTCG	NA	False	NA	6	True	AATAAA	-42	NA	64126385	64066388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ES.25991.8	chr5	-	5323	1	NIC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	16394	4	mono-exon	FALSE	NA	NA	NA	NA	NA	554	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGACATCTTACAGGACCAG	NA	False	NA	-9	True	AATAAA	-27	NA	64071726	64066403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_64066400_64071700
ES.25992.1	chr5	+	1826	3	NNC	ENSMUSG00000106219.2	novel	2627	3	NA	NA	25	-2815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAATCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	64202345	64204756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64202416_64202491_64202531_64203039
ES.25993.1	chr5	+	2752	1	Genic_Genomic	ENSMUSG00000106219.2	novel	NA	NA	NA	NA	3904	1405	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	64206224	64208976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_64206200_64209000
ES.25994.1	chr5	+	2311	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	-98	156	-98	31	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTCTTCTGTGTAAC	NA	False	NA	47	True	AAAAAG	-34	NA	64250194	64285538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.10	chr5	+	2369	15	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	298.214071856211	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATTGTAAACAATATGC	NA	False	NA	13	True	AATAAA	-19	NA	64250315	64285504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64253087_64253279_64254321_64254490_64258289_64258397_64260196_64260282_64260697_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.11	chr5	+	2603	15	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	264.632214939288	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64250318	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64270877_64271333_64273642_64273777_64285119
ES.25994.12	chr5	+	1957	13	NIC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	27	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	215.79985261554	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64250319	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64273642_64273777_64285119
ES.25994.13	chr5	+	2154	13	NIC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	215.79985261554	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGTTTATTTTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	64250319	64285696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64273642_64273777_64285119
ES.25994.14	chr5	+	2073	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	27	269	27	-82	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTAACATCTCTATG	NA	False	NA	-66	True	AATAAA	-18	NA	64250319	64285425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.15	chr5	+	2177	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	27	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	209.506549021362	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64250319	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64264981_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.16	chr5	+	2343	15	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	264.506240040586	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATTGTAAACAATATGC	NA	False	NA	13	True	AATAAA	-19	NA	64250319	64285504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64253087_64253279_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.17	chr5	+	5095	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	274.779459711402	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTAATAAGGTTTATTT	NA	False	NA	NA	False	AATAAA	-11	NA	64250319	64285690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263280_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64270877_64273777_64285119
ES.25994.18	chr5	+	2362	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	200.61346742831	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGTTTATTTTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	64250323	64285696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260697_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.19	chr5	+	2060	15	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	85	-228	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	264.506240040586	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATAATATTTTAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	64250377	64285279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64253087_64253279_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.2	chr5	+	2390	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	-19	-2	-19	2	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGTTTATTTTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	64250273	64285696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.20	chr5	+	1870	12	ISM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	7994	195	-2446	-8	3prime_fragment	FALSE	canonical	3	609	junction_4	82.0267039767493	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64258286	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.3	chr5	+	1968	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	-9	410	-9	-223	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATTTTAGGGCCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	64250283	64285284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.4	chr5	+	2972	13	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	2	4247	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	215.148140178395	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTAGCCTTTATTTC	NA	False	NA	NA	False	ACTAAA	-12	NA	64250294	64272191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64270877
ES.25994.5	chr5	+	2832	13	NIC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	5	-8	intron_retention	FALSE	canonical	3	609	junction_6	71.1231326644152	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64250297	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.6	chr5	+	2369	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	203.803682077637	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATAAGGTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64250299	64285693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258405_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.7	chr5	+	4932	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	21	6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	207.271453946996	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATATGCCTTACCTTG	NA	False	NA	22	True	AATAAA	-28	NA	64250313	64285513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64270877_64273777_64285119
ES.25994.8	chr5	+	2134	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.608435327867	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTAGATTGTAAACAA	NA	False	NA	8	True	AATAAA	-14	NA	64250313	64285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64250413_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25994.9	chr5	+	2302	14	NIC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	23	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	208.755880759032	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATAAGGTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64250315	64285693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261208_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ES.25995.1	chr5	-	1564	3	Antisense	novelGene_ENSMUSG00000029171.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAGAAAGCAGCAGACA	NA	False	NA	NA	False	NA	NA	NA	64272120	64267857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_64267993_64269354_64269541_64270877
ES.25996.1	chr5	+	5658	21	NNC	ENSMUSG00000029174.19	novel	778	6	NA	NA	-6776	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.2498102979079	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	64306871	64508829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64306922_64307583_64308055_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.10	chr5	+	3591	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-106	1275	-106	-1270	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGTGGAAAGAGCATT	8410	False	NA	27	True	AATAAA	-37	NA	64387635	64507554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.11	chr5	+	5285	18	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-105	3884	-105	-3879	5prime_fragment	FALSE	canonical	3	216	junction_12	25.3445461739059	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTAGTAGCTGTCACT	8411	False	NA	NA	False	AATAAA	-24	NA	64387636	64504945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594
ES.25996.12	chr5	+	3864	21	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-105	-1275	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	93.4566610788124	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGTGTGTGGAAAGA	8411	False	NA	22	True	AATAAA	-32	NA	64387636	64507549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64441309_64441469_64442032_64442153_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.13	chr5	+	4966	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.0689528347388	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8411	False	NA	5	True	AATAAA	-15	NA	64387636	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417768_64419254_64419379_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.14	chr5	+	9071	18	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-104	-1	intron_retention	FALSE	canonical	3	216	junction_11	25.5002544257611	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	8412	False	NA	4	True	AATAAA	-14	NA	64387637	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.15	chr5	+	4727	19	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-104	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	63.3878907312589	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8412	False	NA	5	True	AATAAA	-15	NA	64387637	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439239_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.17	chr5	+	4798	19	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-102	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	62.855433779074	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	8414	False	NA	2	True	AATAAA	-12	NA	64387639	64508821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432793_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.19	chr5	+	5133	21	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-98	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	93.4566610788124	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCGTGTTGTCTG	8418	False	NA	6	True	AATAAA	-16	NA	64387643	64508825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64441309_64441469_64442032_64442153_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.2	chr5	+	5593	21	NNC	ENSMUSG00000029174.19	novel	6471	22	NA	NA	-370	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.0847270402673	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	NA	False	NA	4	True	AATAAA	-14	NA	64316423	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64316640_64317602_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.20	chr5	+	4669	18	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-98	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	64.8174439334218	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTCGTGTTGTCTGT	8418	False	NA	7	True	AATAAA	-17	NA	64387643	64508826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.21	chr5	+	4763	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-97	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.8345572101391	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCGTGTTGTCTG	8419	False	NA	6	True	AATAAA	-16	NA	64387644	64508825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414247_64414336_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.22	chr5	+	5004	20	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-93	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	81.9480275807584	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	8423	False	NA	2	True	AATAAA	-12	NA	64387648	64508821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64441309_64441469_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.24	chr5	+	4707	18	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-66	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	64.4501363008966	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	8450	False	NA	2	True	AATAAA	-12	NA	64387675	64508821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.25	chr5	+	4980	19	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	60.9865397009156	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	8450	False	NA	10	True	AATAAA	-20	NA	64387675	64508829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502440_64502769_64507072
ES.25996.26	chr5	+	3988	15	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.7277048319291	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	8451	False	NA	4	True	AATAAA	-14	NA	64387676	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64428432_64428525_64432793_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.27	chr5	+	2477	1	Genic_Genomic	ENSMUSG00000029174.19	novel	NA	NA	NA	NA	-59	-51923	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTGGGACATTCACTC	8457	False	NA	NA	False	NA	NA	NA	64387682	64390159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_64387700_64390200
ES.25996.28	chr5	+	3389	19	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-59	-1293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.3878907312589	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCCTTCTTGCAGAG	8457	False	NA	4	True	AATAAA	-14	NA	64387682	64507531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439239_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.29	chr5	+	3933	16	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-56	14831	-56	-14826	5prime_fragment	FALSE	canonical	3	216	junction_12	20.454828280873	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	8460	False	NA	NA	False	NA	NA	NA	64387685	64493998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620
ES.25996.3	chr5	+	6013	20	FSM	ENSMUSG00000029174.19	ENSMUST00000101195.9	5432	20	-583	2	177	-2	multi-exon	FALSE	canonical	3	10	junction_1	77.9717968757502	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTCGTGTTGTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	64316970	64508827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.30	chr5	+	3447	16	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-55	15316	-55	-15311	5prime_fragment	FALSE	canonical	3	216	junction_12	20.454828280873	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGGTGCTAGGAGTTGA	8461	False	NA	NA	False	NA	NA	NA	64387686	64493513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620
ES.25996.31	chr5	+	8188	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-52	-3376	-52	3376	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAATGGTGTAATTGTGGT	8464	False	NA	NA	False	NA	NA	NA	64387689	64512205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.32	chr5	+	4879	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	77.9609960012501	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8470	False	NA	5	True	AATAAA	-15	NA	64387695	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64391534_64391613_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.36	chr5	+	4342	18	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-33	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	65.3436484101037	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCTGTGTCTTCGTGT	8483	False	NA	0	True	AATAAA	-10	NA	64387708	64508819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64387874_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.37	chr5	+	5077	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.823538256069	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTCGTGTTGTCTGT	8484	False	NA	7	True	AATAAA	-17	NA	64387709	64508826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64415437_64415726_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.38	chr5	+	3280	16	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-29	15457	-29	-15452	5prime_fragment	FALSE	canonical	3	216	junction_12	20.454828280873	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTTTAAATTTATG	8487	False	NA	NA	False	NA	NA	NA	64387712	64493372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620
ES.25996.39	chr5	+	4787	19	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	63.5279660396569	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	8489	False	NA	4	True	AATAAA	-14	NA	64387714	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507066
ES.25996.4	chr5	+	4330	22	NNC	ENSMUSG00000029174.19	novel	5419	21	NA	NA	-92	-1274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.131444966428	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGTGTGTGGAAAGAG	NA	False	NA	23	True	AATAAA	-33	NA	64317070	64507550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64317199_64317602_64317849_64318981_64319080_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.40	chr5	+	4801	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	79.5913732988765	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8503	False	NA	5	True	AATAAA	-15	NA	64387728	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64497159_64497193_64502594_64502769_64507072
ES.25996.41	chr5	+	4877	21	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	104.272911151459	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	8540	False	NA	4	True	AATAAA	-14	NA	64387765	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439239_64439389_64441309_64441469_64442032_64442153_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.43	chr5	+	4654	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	49	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	92.8403150561382	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	8565	False	NA	10	True	AATAAA	-20	NA	64387790	64508829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64391534_64391613_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439242_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.44	chr5	+	3891	17	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	66	-14781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	98.7367079661865	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAAACAGGGTGCTTG	8582	False	NA	NA	False	NA	NA	NA	64387807	64494043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432793_64432849_64435258_64435388_64436673_64436761_64437287_64437379_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620
ES.25996.45	chr5	+	5258	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	96.0862378124615	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8610	False	NA	5	True	AATAAA	-15	NA	64387835	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432845_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64451037_64451639_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.47	chr5	+	3758	16	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-18399	-10089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	88.8807940758607	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTTTTTTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	64414363	64498735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64498008_64498115
ES.25996.48	chr5	+	6505	15	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-11954	0	intron_retention	FALSE	canonical	3	216	junction_8	25.6507150713868	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	5	True	AATAAA	-15	NA	64420808	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64420923_64421668_64421802_64428432_64428525_64432737_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.49	chr5	+	6909	14	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-11085	-1276	intron_retention	FALSE	canonical	3	216	junction_7	26.7749772788704	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACACAGTGTGTGGAAAG	234	False	NA	21	True	AATAAA	-31	NA	64421677	64507548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64421802_64428432_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.5	chr5	+	4130	21	FSM	ENSMUSG00000029174.19	ENSMUST00000121370.8	5419	21	-3	1292	-3	-1287	multi-exon	FALSE	canonical	1	2	junction_1	90.8451842422041	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCTTGCAGAGACACAG	NA	False	NA	10	True	AATAAA	-20	NA	64317159	64507537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64317199_64317602_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.50	chr5	+	3848	14	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	40690	6	-4331	-1	3prime_fragment	FALSE	canonical	3	216	junction_7	26.8544179477718	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	6988	False	NA	4	True	AATAAA	-14	NA	64428431	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.51	chr5	+	4294	14	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-531	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.0530506223001	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	NA	False	NA	4	True	AATAAA	-14	NA	64432231	64508823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64497159_64497193_64502594_64502769_64507072
ES.25996.52	chr5	+	4186	10	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	50609	5	5588	0	3prime_fragment	FALSE	canonical	3	216	junction_3	29.2764600167286	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	5	True	AATAAA	-15	NA	64438350	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.53	chr5	+	5121	9	ISM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	53573	5	8552	0	3prime_fragment	FALSE	canonical	3	216	junction_2	28.8939331867435	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	NA	False	NA	5	True	AATAAA	-15	NA	64441314	64508824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.54	chr5	+	2863	1	NIC	ENSMUSG00000029174.19	novel	6471	22	NA	NA	16761	-33328	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAGATGAGTTGCG	NA	False	NA	NA	False	ACTAAA	-27	NA	64472633	64475496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64472600_64475500
ES.25996.55	chr5	+	3880	3	ISM	ENSMUSG00000029174.19	ENSMUST00000140960.3	3083	9	39250	-2	39250	2	3prime_fragment	FALSE	canonical	3	243	junction_2	36	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTCGTGTTGTCTGT	7260	False	NA	7	True	AATAAA	-17	NA	64495122	64508826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64497075_64502594_64502769_64507072
ES.25996.57	chr5	+	2811	2	ISM	ENSMUSG00000029174.19	ENSMUST00000140960.3	3083	9	40297	4324	40297	-4324	internal_fragment	FALSE	canonical	3	315	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAACAGTTGATGTACCA	8307	False	NA	NA	False	NA	NA	NA	64496169	64504500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64497075_64502594
ES.25996.6	chr5	+	5496	21	NNC	ENSMUSG00000029174.19	novel	6471	22	NA	NA	148	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.0847270402673	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	NA	False	NA	2	True	AATAAA	-12	NA	64317310	64508821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64317432_64317602_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25996.7	chr5	+	3502	3	NNC	ENSMUSG00000029174.19	novel	5432	20	NA	NA	28	-54760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGGAAGATCCACCGGG	NA	False	NA	NA	False	AAAACA	-6	NA	64317581	64387322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64317849_64330730_64331240_64384596
ES.25996.9	chr5	+	4875	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	-116	1	-116	-1	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCGTGTTGTCTGTTT	8400	False	NA	9	True	AATAAA	-19	NA	64387625	64508828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ES.25997.1	chr5	-	4129	1	Intergenic	novelGene_21614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTGCGTGGAAGGTA	NA	False	NA	NA	False	NA	NA	NA	64330309	64326180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64326200_64330300
ES.25998.1	chr5	+	2635	1	Intergenic	novelGene_21615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64548907	64551542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_64548900_64551500
ES.25999.1	chr5	-	3601	1	Intergenic	novelGene_21616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATCAGGAGAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	64569021	64565420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64565400_64569000
ES.26.1	chr1	-	173	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAATTTTAAATGATT	NA	False	NA	NA	False	NA	NA	NA	5319575	5319402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_5319400_5319600
ES.260.1	chr1	+	287	3	Antisense	novelGene_ENSMUSG00000102279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGCTGCCATGGATAT	NA	False	NA	NA	False	NA	NA	NA	36024633	36031315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36024686_36026666_36026768_36031181
ES.2600.1	chr10	+	1489	3	Intergenic	novelGene_1968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCTAAGATGCCTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	37096640	37109452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_37096728_37106697_37106820_37108172
ES.2600.2	chr10	+	1671	10	NNC	ENSMUSG00000097742.2	novel	2600	3	NA	NA	-113581	-2078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.684934889218775	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGGACTTTGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	37099900	37253570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_37099942_37116613_37116738_37193593_37193682_37204858_37204973_37206988_37207464_37209130_37209184_37213379_37213513_37214278_37214341_37225416_37225569_37253141
ES.2600.3	chr10	+	5083	2	Intergenic	novelGene_1969	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAAGATGCCTTTGTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	37103021	37109457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_37106820_37108172
ES.2600.4	chr10	+	966	1	Intergenic	novelGene_1970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACATTTCTCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	37217342	37218308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_37217300_37218300
ES.26000.1	chr5	+	1059	2	NNC	ENSMUSG00000105105.2	novel	541	4	NA	NA	-2037	-39402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64589260	64591529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64589882_64591091
ES.26001.1	chr5	-	1485	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	3	1391	3	-20	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAAGAACATA	NA	False	NA	NA	False	NA	NA	NA	64768040	64752590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
ES.26001.2	chr5	-	1165	3	ISM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	-4	7376	-4	-6005	5prime_fragment	FALSE	canonical	3	10	junction_1	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCCCATTTTAACTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	64768047	64758575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_64759493_64767442_64767499_64767855
ES.26002.1	chr5	-	1139	3	Intergenic	novelGene_21617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGAATTTATTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	64837642	64790860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64791575_64797318_64797591_64837489
ES.26003.1	chr5	-	2867	3	Intergenic	novelGene_21618	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCATCTTGCTAAATTAC	1505	False	NA	NA	False	ATTAAA	-17	NA	64897520	64884755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64886065_64887902_64889428_64897487
ES.26004.1	chr5	+	184	1	Intergenic	novelGene_21619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAACTAAGACTCA	2432	False	NA	NA	False	NA	NA	NA	64926624	64926808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_64926600_64926800
ES.26005.1	chr5	+	1632	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-6147	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.090390829332	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATCCAGCCTATTAGT	NA	False	NA	2	True	AGTAAA	-13	NA	64954583	64986892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64954751_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.10	chr5	+	5433	7	NNC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-93	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	264.836689720707	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATAATCATGTGATTA	NA	False	NA	6	True	AATAAA	-14	NA	64960637	64990242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64961135_64974077_64974174_64977214_64977336_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.11	chr5	+	5244	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	-17	-6	-17	6	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTGATTACTATAGGT	NA	False	NA	14	True	AATAAA	-22	NA	64960713	64990250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.12	chr5	+	4061	3	ISM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-175	-2339	14	19	intron_retention	FALSE	canonical	3	600	junction_1	56.5	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGAAAGATGGAAGACT	NA	False	NA	NA	False	NA	NA	NA	64960744	64982791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64961135_64974077_64974174_64979216
ES.26005.13	chr5	+	1177	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-148	-3	41	3	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCTGTGGATGGCCGC	NA	False	NA	21	True	AATAAA	-21	NA	64960771	64980455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
ES.26005.14	chr5	+	1779	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	92	3350	92	1	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCCAGCCTATTAGTCC	NA	False	NA	4	True	AGTAAA	-15	NA	64960822	64986894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.15	chr5	+	1537	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	119	3565	-70	-146	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGGTCAGTAGTTGATA	NA	False	NA	NA	False	NA	NA	NA	64960849	64986679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.16	chr5	+	3908	5	NNC	ENSMUSG00000029178.15	novel	1026	4	NA	NA	-55	646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	293.322774431172	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGGGGGTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	64960864	64983418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64982650_64982788
ES.26005.17	chr5	+	1816	7	NIC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	299.882615923853	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCCAGCCTATTAGTCC	NA	False	NA	4	True	AGTAAA	-15	NA	64960864	64986894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
ES.26005.18	chr5	+	4830	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	134	257	-55	-257	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGAATGGGTAAAGG	NA	False	NA	NA	False	AATAAA	-24	NA	64960864	64989987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.19	chr5	+	1757	3	ISM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-55	-155	-55	155	intron_retention	FALSE	canonical	3	600	junction_1	56.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCTGGTTTTTTATTT	NA	False	NA	NA	False	ACTAAA	-25	NA	64960864	64980607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64961135_64974077_64974174_64979216
ES.26005.2	chr5	+	5247	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5782	5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGTGATTACTATAGG	NA	False	NA	13	True	AATAAA	-21	NA	64954948	64990249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.20	chr5	+	4048	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-54	-2968	-54	648	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGGTTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	64960865	64983420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
ES.26005.21	chr5	+	5164	7	NIC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-54	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	299.882615923853	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATAATCATGTGATTAC	NA	False	NA	7	True	AATAAA	-15	NA	64960865	64990243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
ES.26005.22	chr5	+	1229	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	-53	-150	-53	150	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAATCTTCTGGTTTTT	NA	False	NA	NA	False	ACTAAA	-20	NA	64960866	64980602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
ES.26005.23	chr5	+	984	3	NIC	ENSMUSG00000029178.15	novel	1026	4	NA	NA	-52	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	348.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTGTGGATGGCCG	NA	False	NA	20	True	AATAAA	-20	NA	64960867	64980454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64961135_64979216_64979701_64980221
ES.26005.24	chr5	+	3200	6	NNC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	276.279134210313	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATAATCATGTGATTAC	NA	False	NA	7	True	AATAAA	-15	NA	64960867	64990243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984600_64988188
ES.26005.25	chr5	+	2949	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	137	2135	-52	1216	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGCCTCTGACCA	NA	False	NA	NA	False	AATAAA	-17	NA	64960867	64988109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.26	chr5	+	2225	1	FSM	ENSMUSG00000106205.2	ENSMUST00000198074.2	1722	1	-489	-14	-489	14	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATTTTCAAGTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	64960867	64963092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64960900_64963100
ES.26005.27	chr5	+	9027	6	NNC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-52	2	intron_retention	FALSE	non_canonical	0	0	junction_4	273.534933783603	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCATGTGATTACTAT	NA	False	NA	10	True	AATAAA	-18	NA	64960867	64990246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64982650_64982788_64984614_64986319
ES.26005.28	chr5	+	4378	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	137	706	-52	-706	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGAGACTATTGCTG	NA	False	NA	NA	False	ATTAAA	-36	NA	64960867	64989538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.3	chr5	+	5190	6	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5755	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	310.059607172556	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64954975	64990244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984477_64984614_64986319
ES.26005.30	chr5	+	4913	7	NNC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.34435460361	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATAATCATGTGATTAC	NA	False	NA	7	True	AATAAA	-15	NA	64960867	64990243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64960917_64961086_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.31	chr5	+	3341	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	137	1743	-52	1608	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTTTCTTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	64960867	64988501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.32	chr5	+	4512	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	137	572	-52	-572	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCACTTGAGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	64960867	64989672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.33	chr5	+	5186	8	NIC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	283.678317386264	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATCATGTGATTACTA	NA	False	NA	9	True	AATAAA	-17	NA	64960928	64990245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64961135_64974077_64974174_64975967_64976051_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
ES.26005.34	chr5	+	5600	6	NNC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	17	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	273.534933783603	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTATCCAGCCTAT	NA	False	NA	-2	True	AGTAAA	-9	NA	64960936	64986888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64982650_64982788_64984614_64986319
ES.26005.35	chr5	+	4794	6	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-72	-260	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	260.049687559897	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAGACTGAATGGGTAA	8174	False	NA	NA	False	AATAAA	-21	NA	64969609	64989984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.36	chr5	+	995	4	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-25	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	314.494656375731	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACATGTGATGTGCTGTG	8221	False	NA	12	True	AATAAA	-12	NA	64969656	64980446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221
ES.26005.37	chr5	+	3880	5	NNC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-25	698	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	343.309627013284	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAGTTCCAGTCACCTG	8221	False	NA	NA	False	AATAAA	-18	NA	64969656	64983470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64982650_64982788
ES.26005.38	chr5	+	4989	6	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	260.049687559897	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATGTGATTACTATAG	8243	False	NA	12	True	AATAAA	-20	NA	64969678	64990248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.39	chr5	+	1113	4	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	17	155	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	314.494656375731	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCTGGTTTTTTATTT	8264	False	NA	NA	False	ACTAAA	-25	NA	64969699	64980607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221
ES.26005.4	chr5	+	2526	2	Antisense	novelGene_ENSMUSG00000097640.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTCCTTTGTTCTTTT	NA	False	NA	NA	False	ACTAAA	-12	NA	64955005	64959714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_64955374_64957556
ES.26005.40	chr5	+	1599	6	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	260.049687559897	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATCCAGCCTATTAGT	8277	False	NA	2	True	AGTAAA	-13	NA	64969712	64986892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.41	chr5	+	2568	2	ISM	ENSMUSG00000029178.15	ENSMUST00000200384.2	298	4	-14	1745	-14	-7	5prime_fragment	FALSE	canonical	3	697	junction_1	0	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9564	False	NA	NA	False	NA	NA	NA	64979676	64982765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_64979701_64980221
ES.26005.5	chr5	+	898	4	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5441	3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	319.679005670793	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCTGTGGATGGCCGC	NA	False	NA	21	True	AATAAA	-21	NA	64955289	64980455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221
ES.26005.6	chr5	+	4460	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5441	-441	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATACTAGCACTTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	64955289	64989803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.7	chr5	+	1549	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5439	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCCAGCCTATTAGTCC	NA	False	NA	4	True	AGTAAA	-15	NA	64955291	64986894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ES.26005.8	chr5	+	4978	7	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5439	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	308.748009440277	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64955291	64990244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
ES.26005.9	chr5	+	10480	5	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5374	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	345.928009129067	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATAATCATGTGATTAC	NA	False	NA	7	True	AATAAA	-15	NA	64955356	64990243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64982650_64982788
ES.26006.1	chr5	-	2098	1	FSM	ENSMUSG00000097640.8	ENSMUST00000200143.2	1460	1	-290	-348	-9	348	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAAGTTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	64961469	64959371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_64959400_64961500
ES.26006.2	chr5	-	1655	2	NNC	ENSMUSG00000097640.8	novel	572	2	NA	NA	-248	10	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTAGTTCTGTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	64961708	64959709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_64961303_64961646
ES.26007.1	chr5	-	1547	1	Intergenic	novelGene_21620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	64966512	64964965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_64965000_64966500
ES.26008.1	chr5	-	8255	1	Antisense	novelGene_ENSMUSG00000029178.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCCAATACGGTGCAGA	NA	False	NA	NA	False	AGTAAA	-44	NA	64986528	64978273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_64978300_64986500
ES.26008.2	chr5	-	4325	2	Antisense	novelGene_ENSMUSG00000029178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCCAATACGGTGCAGA	NA	False	NA	NA	False	AGTAAA	-44	NA	64983119	64978273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_64979699_64980219
ES.26009.1	chr5	+	4351	5	Antisense	novelGene_ENSMUSG00000118495.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAAGATTGATCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	65045549	65057259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65045712_65045754_65046768_65046943_65047042_65054019_65055887_65056048
ES.2601.1	chr10	-	3243	1	Intergenic	novelGene_1971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAACCAAACGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	37584412	37581169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_37581200_37584400
ES.26010.1	chr5	+	165	1	Intergenic	novelGene_21621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	65060728	65060893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65060700_65060900
ES.26011.1	chr5	-	2837	1	Genic_Genomic	ENSMUSG00000051498.8	novel	NA	NA	NA	NA	5181	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGATTTTTGTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	65112209	65109372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_65109400_65112200
ES.26012.1	chr5	+	2908	14	FSM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	18	12	18	-12	multi-exon	FALSE	canonical	3	10	junction_1	7.03667484678724	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTAAAGGTGTGGCATTT	NA	False	NA	NA	False	AATAAA	-40	NA	65127431	65199217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ES.26012.2	chr5	+	2380	13	NNC	ENSMUSG00000029185.15	novel	2938	14	NA	NA	22	-4697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.62610701430386	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACGATCATGGATTTTC	NA	False	NA	NA	False	CATAAA	-10	NA	65127435	65194532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65193751
ES.26012.3	chr5	+	2522	11	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	23	9495	23	-9495	5prime_fragment	FALSE	canonical	3	10	junction_1	5.2687759489278	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATCATTAACTTT	NA	False	NA	NA	False	AATAGA	-11	NA	65127436	65189734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597
ES.26012.4	chr5	+	2266	3	NNC	ENSMUSG00000029185.15	novel	2938	14	NA	NA	35	-24200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATCTTGGTGATTGCTT	NA	False	NA	NA	False	NA	NA	NA	65127448	65139034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65127488_65129721_65129965_65137050
ES.26012.5	chr5	+	1888	6	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	58213	22	55859	-22	3prime_fragment	FALSE	canonical	3	20	junction_5	5.53534100123922	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAATCCGTAAAGG	NA	False	NA	NA	False	AATAAA	-30	NA	65185626	65199207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ES.26013.1	chr5	-	176	1	Intergenic	novelGene_21622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGAGCAAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	65170510	65170334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65170300_65170500
ES.26014.1	chr5	-	173	1	Intergenic	novelGene_21623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAACCCT	NA	False	NA	NA	False	NA	NA	NA	65174333	65174160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65174200_65174300
ES.26015.1	chr5	-	852	1	Intergenic	novelGene_21624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65204555	65203703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65203700_65204600
ES.26016.1	chr5	-	3388	1	Genic_Genomic	ENSMUSG00000037913.13	novel	NA	NA	NA	NA	33874	23	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGCCCAGTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	65215053	65211665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_65211700_65215100
ES.26016.2	chr5	-	3179	2	NNC	ENSMUSG00000037913.13	novel	1012	8	NA	NA	33973	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65214954	65211691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65213658_65213741
ES.26017.1	chr5	-	90	1	Intergenic	novelGene_21625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCATCATCCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	65217251	65217161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65217200_65217300
ES.26018.1	chr5	+	3608	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	-2	-457	-2	375	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGATGGGCAAATTC	NA	False	NA	NA	False	NA	NA	NA	65264879	65325906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ES.26018.10	chr5	+	1401	8	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	30	-3943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5562216490895	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAGAGGGCACTTAAA	NA	False	NA	23	True	AATAAA	-20	NA	65264911	65307054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65265205_65286819_65286921_65298602_65298786_65299619_65299723_65300581_65300719_65301901_65302099_65305931_65306145_65306880
ES.26018.13	chr5	+	150	1	Intergenic	novelGene_21626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATCCTCTACTTAAG	NA	False	NA	NA	False	AATAAA	-8	NA	65317344	65317494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65317300_65317500
ES.26018.2	chr5	+	3020	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	-1	130	-1	-130	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGTCTGAATTGTTTA	NA	False	NA	2	True	NA	NA	NA	65264880	65325319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ES.26018.3	chr5	+	2721	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	2	426	2	-426	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTCTCCCACCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	65264883	65325023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ES.26018.4	chr5	+	1221	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	6	-3943	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	25.9121593079388	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAGAGGGCACTTAAA	NA	False	NA	23	True	AATAAA	-20	NA	65264887	65307054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306880
ES.26018.5	chr5	+	2572	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	6	571	6	-571	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTGGATCTCTGGGTC	NA	False	NA	NA	False	AATAAA	-45	NA	65264887	65324878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ES.26018.6	chr5	+	3131	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	19	-1	19	1	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTGGTTAATATATT	NA	False	NA	NA	False	TATAAA	-37	NA	65264900	65325450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ES.26018.8	chr5	+	1242	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	21	-3943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.9151883379703	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAGAGGGCACTTAAA	NA	False	NA	23	True	AATAAA	-20	NA	65264902	65307054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306844
ES.26018.9	chr5	+	1934	5	ISM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	28	18396	28	-3944	5prime_fragment	FALSE	canonical	3	68	junction_1	10.0591997693654	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAGAGGGCACTTAA	NA	False	NA	22	True	AATAAA	-19	NA	65264909	65307053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931
ES.26019.1	chr5	+	178	1	Intergenic	novelGene_21627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	3044	False	NA	NA	False	NA	NA	NA	65351532	65351710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65351500_65351700
ES.2602.1	chr10	-	178	1	Intergenic	novelGene_1972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	38259129	38258951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_38259000_38259100
ES.26020.1	chr5	+	6310	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	-24	-7	-24	-2	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTCCTGGATTTGAT	8526	False	NA	NA	False	AATAAA	-21	NA	65357014	65417756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
ES.26020.10	chr5	+	4016	25	ISM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	15	4	1	-4	intron_retention	FALSE	canonical	3	27	junction_5	5.76974267671926	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGATTGCATGCCCC	8586	False	NA	NA	False	NA	NA	NA	65357074	65401925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661
ES.26020.11	chr5	+	4430	37	NNC	ENSMUSG00000037890.14	novel	4401	37	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	9.89618176774492	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAACATTTTCCTGGATT	8587	False	NA	NA	False	AATAAA	-17	NA	65357075	65417752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415642_65417456
ES.26020.12	chr5	+	4236	36	NIC	ENSMUSG00000037890.14	novel	4401	37	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	9.75202752335772	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTAACATTTTCCTGG	8592	False	NA	NA	False	AATAAA	-14	NA	65357080	65417749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
ES.26020.13	chr5	+	1322	10	NNC	ENSMUSG00000037890.14	novel	5830	35	NA	NA	-9002	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.05689644012591	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAACATTTTCCTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	65404765	65417750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65404873_65406132_65406211_65408179_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
ES.26020.14	chr5	+	3949	4	ISM	ENSMUSG00000037890.14	ENSMUST00000203359.2	5830	35	49481	1	-4329	0	intron_retention	FALSE	canonical	3	22	junction_3	1.69967317119759	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAACATTTTCCTGGATT	NA	False	NA	NA	False	AATAAA	-17	NA	65409438	65417752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65409747_65412393_65412476_65413623_65413775_65414344
ES.26020.2	chr5	+	6012	35	NNC	ENSMUSG00000037890.14	novel	6279	36	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	11.1492315126111	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAACATTTTCCTGGATT	8527	False	NA	NA	False	AATAAA	-17	NA	65357015	65417752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415922_65415982
ES.26020.3	chr5	+	3426	26	FSM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	-38	-7	-17	7	multi-exon	FALSE	canonical	3	27	junction_5	5.73606136647787	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCCCCCTATAAATTAA	8533	False	NA	NA	False	NA	NA	NA	65357021	65401936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462
ES.26020.4	chr5	+	4406	37	FSM	ENSMUSG00000037890.14	ENSMUST00000041892.13	4401	37	-7	2	-5	-2	multi-exon	FALSE	canonical	3	17	junction_26	8.39311887467611	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTCCTGGATTTGAT	8545	False	NA	NA	False	AATAAA	-21	NA	65357033	65417756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
ES.26020.5	chr5	+	4526	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	2	1751	0	-1751	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGACATGTTTCTTT	8552	False	NA	NA	False	NA	NA	NA	65357040	65415998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
ES.26020.7	chr5	+	6540	35	ISM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	27	3	6	-3	intron_retention	FALSE	canonical	3	17	junction_26	8.15655636679511	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACATCTAACATTTTCC	8577	False	NA	NA	False	AATAAA	-11	NA	65357065	65417746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078
ES.26020.8	chr5	+	3420	26	NNC	ENSMUSG00000037890.14	novel	3381	26	NA	NA	-6	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	9.34271909028629	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCCCCTATAAATTAATA	8579	False	NA	NA	False	NA	NA	NA	65357067	65401938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400847_65401462
ES.26020.9	chr5	+	4432	36	NNC	ENSMUSG00000037890.14	novel	4401	37	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_24	10.1485296009434	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACATTTTCCTGGATTT	8579	False	NA	NA	False	AATAAA	-18	NA	65357067	65417753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398498_65398855_65398940_65400661_65400809_65401475_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
ES.26021.1	chr5	+	1875	1	Antisense	novelGene_ENSMUSG00000105935.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65464851	65466726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65464900_65466700
ES.26022.1	chr5	+	1395	2	Antisense	novelGene_ENSMUSG00000029191.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCAAATGAACCATTAC	NA	False	NA	NA	False	AAAACA	-42	NA	65468364	65471553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65468507_65470300
ES.26023.1	chr5	+	4276	1	Intergenic	novelGene_21630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATAATCCAAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	65480739	65485015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65480700_65485000
ES.26024.1	chr5	+	180	1	Intergenic	novelGene_21631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65489913	65490093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65489900_65490100
ES.26025.1	chr5	-	4247	4	ISM	ENSMUSG00000029191.17	ENSMUST00000205063.2	1954	5	1409	-3583	1409	1187	3prime_fragment	TRUE	canonical	3	588	junction_3	15.06283137026	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGAATCTTCAACTCCA	6842	False	NA	NA	False	NA	NA	NA	65429601	65418005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65421775_65423444_65423659_65426290_65426437_65429483
ES.26025.10	chr5	-	4780	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	148.019137041653	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493015	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454847_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.100	chr5	-	3846	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	136.365446399169	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACCTGGAGCCGAGT	0	True	NA	NA	False	AATAAA	-16	NA	65492987	65419944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65492866
ES.26025.103	chr5	-	3942	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	136.091568183174	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACCTGGAGCCGAGT	4	False	NA	NA	False	AATAAA	-16	NA	65492983	65419944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460523_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.107	chr5	-	3966	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-24	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_22	136.072278332346	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCACCTGGAGCCGAG	-1	True	NA	NA	False	AATAAA	-15	NA	65492988	65419945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468501_65470300_65470377_65476747_65476874_65492866
ES.26025.110	chr5	-	3789	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	1	9	junction_14	137.20484044656	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTACCACCTGGAGCCG	0	True	NA	NA	False	AATAAA	-13	NA	65492987	65419947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.111	chr5	-	4017	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	132.962609614717	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTACCACCTGGAGCCG	0	True	NA	NA	False	AATAAA	-13	NA	65492987	65419947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
ES.26025.114	chr5	-	3969	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.710345333915	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGCTACCACCTGGAG	NA	False	NA	NA	False	AATAAA	-10	NA	65492993	65419950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437152_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.115	chr5	-	2874	1	NIC	ENSMUSG00000029191.17	novel	4689	25	NA	NA	-573	-7121	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	766	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAAACATTAGTAT	4860	False	NA	NA	False	NA	NA	NA	65431583	65428709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65428700_65431600
ES.26025.116	chr5	-	303	1	Intergenic	novelGene_21628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	65457034	65456731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65456700_65457000
ES.26025.117	chr5	-	159	1	Intergenic	novelGene_21629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCAGGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	65457034	65456875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65456900_65457000
ES.26025.118	chr5	-	536	5	ISM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	-26	40517	-23	7852	5prime_fragment	FALSE	canonical	3	537	junction_2	34.5144897108446	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAATGAAGAAAAC	0	True	NA	NA	False	NA	NA	NA	65492987	65460461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.15	chr5	-	4774	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.007414162603	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493004	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420522_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.17	chr5	-	4412	23	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_19	138.445240838188	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-1	True	NA	-4	True	AATAAA	-19	NA	65492988	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.18	chr5	-	4696	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	148.937067246539	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	0	True	NA	-4	True	AATAAA	-19	NA	65492987	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460523_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.2	chr5	-	5000	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	280	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	134.36609789634	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGTTTAATACAGGAG	0	True	NA	NA	False	AATAAA	-17	NA	65492987	65418912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454816_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.21	chr5	-	4651	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_2	146.393869169974	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	11	False	NA	-4	True	AATAAA	-19	NA	65492976	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421712_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.22	chr5	-	7106	22	NIC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	20	-1	intron_retention	FALSE	canonical	3	375	junction_1	55.6781730745191	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	NA	False	NA	-5	True	AATAAA	-18	NA	65492993	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.24	chr5	-	4712	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.560956641769	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	14	False	NA	-5	True	AATAAA	-18	NA	65492973	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421582_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460546_65468378_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.27	chr5	-	4538	24	NIC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	139.073520967884	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-9	True	NA	-5	True	AATAAA	-18	NA	65492956	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.29	chr5	-	4772	26	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	169.02016921066	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	13	False	NA	-5	True	AATAAA	-18	NA	65492974	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65440867_65440929_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.35	chr5	-	4464	23	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_18	175.415021455023	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-1	True	NA	-5	True	AATAAA	-18	NA	65492988	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.36	chr5	-	4643	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_19	136.368579276858	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	0	True	NA	-5	True	AATAAA	-18	NA	65492987	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.38	chr5	-	5370	12	NIC	ENSMUSG00000029191.17	novel	4689	25	NA	NA	-14304	-1	intron_retention	FALSE	canonical	0	0	junction_5	195.853124256397	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	9442	False	NA	-5	True	AATAAA	-18	NA	65445314	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65434815_65436053_65437158_65442191_65442297_65445232
ES.26025.40	chr5	-	4775	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	133.829954035792	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-3	True	NA	-5	True	AATAAA	-18	NA	65492990	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
ES.26025.41	chr5	-	5382	24	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	0	-1	intron_retention	FALSE	canonical	3	10	junction_23	141.016067137494	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-14	True	NA	-5	True	AATAAA	-18	NA	65492961	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
ES.26025.43	chr5	-	4774	26	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	178.410340507494	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-4	False	NA	-5	True	AATAAA	-18	NA	65492991	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65440882_65440929_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.44	chr5	-	4020	20	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-27488	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	147.498758152432	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	NA	False	NA	-5	True	AATAAA	-18	NA	65458498	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65458445
ES.26025.45	chr5	-	4750	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	134.591434224718	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	13	False	NA	-5	True	AATAAA	-18	NA	65492974	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492824
ES.26025.46	chr5	-	4290	23	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	140.519645107569	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-14	True	NA	-5	True	AATAAA	-18	NA	65492961	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65468480_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.48	chr5	-	4723	25	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.748655159979	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	-3	True	NA	-5	True	AATAAA	-18	NA	65492990	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421768_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.49	chr5	-	4804	26	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	193.60485117889	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTACTGAGTCTTGCCCC	14	False	NA	-5	True	AATAAA	-18	NA	65492973	65419195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65440882_65440929_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
ES.26025.51	chr5	-	4955	26	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	200.900946737441	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTACTGAGTCTTGCCC	12	False	NA	-6	True	AATAAA	-17	NA	65492975	65419196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65424932_65425132_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492824
ES.26025.54	chr5	-	4610	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	150.134432513288	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTACTGAGTCTTGCCC	14	False	NA	-6	True	AATAAA	-17	NA	65492973	65419196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.55	chr5	-	4940	26	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	179.503760406293	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTACTGAGTCTTGCCC	4	False	NA	-6	True	AATAAA	-17	NA	65492983	65419196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65435442_65435661_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.56	chr5	-	4758	26	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	167.794331251088	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTACTGAGTCTTGCCC	-6	True	NA	-6	True	AATAAA	-17	NA	65492953	65419196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431535_65431605_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.6	chr5	-	4842	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	-86	-5	-86	3	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTCTTGCCCCTCTCTT	NA	False	NA	1	True	AATAAA	-24	NA	65493099	65419189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.62	chr5	-	4542	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	1	9	junction_14	151.269073849262	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	0	True	NA	-7	True	AATAAA	-16	NA	65492987	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.63	chr5	-	4628	25	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_21	148.685817152216	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	0	True	NA	-7	True	AATAAA	-16	NA	65492987	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468480_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.64	chr5	-	4794	26	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	176.881275436379	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	0	True	NA	-7	True	AATAAA	-16	NA	65492987	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65473376_65473449_65476747_65476874_65492866
ES.26025.65	chr5	-	2806	13	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-5834	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.902500600248	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	NA	False	NA	-7	True	AATAAA	-16	NA	65436844	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420484_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799
ES.26025.66	chr5	-	4749	26	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	169.873835536848	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	12	False	NA	-7	True	AATAAA	-16	NA	65492975	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454345_65454385_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.7	chr5	-	5358	24	NIC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	375	junction_1	56.0015190180154	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGAGTCTTGCCCCTC	1	True	NA	-3	True	AATAAA	-20	NA	65492986	65419193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.71	chr5	-	4452	23	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	154.775096764668	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	3	True	NA	-7	True	AATAAA	-16	NA	65492984	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460553_65476816_65476874_65492866
ES.26025.72	chr5	-	4614	24	NIC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	138.583476512147	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	0	True	NA	-7	True	AATAAA	-16	NA	65492987	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.74	chr5	-	4727	25	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	150.245146898882	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	4	False	NA	-7	True	AATAAA	-16	NA	65492983	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442303_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.78	chr5	-	4703	25	NNC	ENSMUSG00000029191.17	novel	4699	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.302321430235	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	-17	True	NA	-7	True	AATAAA	-16	NA	65492964	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420496_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476746_65476874_65492866
ES.26025.79	chr5	-	4458	23	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	155.553085461826	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	0	True	NA	-7	True	AATAAA	-16	NA	65492987	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460546_65476809_65476874_65492866
ES.26025.8	chr5	-	6940	23	NIC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	19	0	intron_retention	FALSE	canonical	3	375	junction_1	57.1875990718556	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65492994	65419194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65434815_65436053_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.80	chr5	-	6020	23	NIC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	16033	-3	intron_retention	FALSE	canonical	3	270	junction_11	82.041916317562	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	9218	False	NA	-7	True	AATAAA	-16	NA	65476874	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747
ES.26025.81	chr5	-	5711	17	ISM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	39714	5	-22183	-3	3prime_fragment	FALSE	canonical	3	185	junction_1	119.287729880319	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	1563	False	NA	-7	True	AATAAA	-16	NA	65453193	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000
ES.26025.82	chr5	-	4723	25	NNC	ENSMUSG00000029191.17	novel	3952	25	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	150.245146898882	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGTACTGAGTCTTGCC	NA	False	NA	-7	True	AATAAA	-16	NA	65492993	65419197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445240_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.86	chr5	-	4714	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	136.575579401622	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCGTACTGAGTCTTGC	1	True	NA	-8	True	AATAAA	-15	NA	65492986	65419198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434705_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.94	chr5	-	4005	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	-51	745	-2	5	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGAGCCGAGTATTCT	NA	False	NA	NA	False	AATAAA	-21	NA	65493015	65419939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26025.95	chr5	-	4021	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	135.446938924026	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTGGAGCCGAGTATT	-1	True	NA	NA	False	AATAAA	-19	NA	65492988	65419941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492824
ES.26025.98	chr5	-	3905	24	NIC	ENSMUSG00000029191.17	novel	4689	25	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_19	150.310390893597	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACCTGGAGCCGAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	65492993	65419942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ES.26026.1	chr5	+	292	1	Intergenic	novelGene_21632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAAACA	355	False	NA	NA	False	NA	NA	NA	65493807	65494099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65493800_65494100
ES.26027.1	chr5	-	187	1	Intergenic	novelGene_21633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	65496825	65496638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65496600_65496800
ES.26028.1	chr5	-	276	1	Intergenic	novelGene_21634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAAATGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	65502612	65502336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65502300_65502600
ES.26029.1	chr5	+	3022	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23269	-32	23175	32	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATGTCAATGTTGAT	NA	False	NA	56	True	AAAAAG	-38	NA	65528925	65541382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.10	chr5	+	3528	5	NNC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23654	1121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4978632088387	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGCGGTGACA	NA	False	NA	NA	False	AATAAA	-35	NA	65529404	65542471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65529554_65529657_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.11	chr5	+	3286	5	NNC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23654	1121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	58.4978632088387	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGCGGTGACA	NA	False	NA	NA	False	AATAAA	-35	NA	65529404	65542471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651_65541426_65541771
ES.26029.12	chr5	+	2222	4	NNC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	24216	71	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	60.1387285088957	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCTGGCTGTCATGGAA	NA	False	NA	95	True	TTTAAA	-43	NA	65529966	65541421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65530006_65533022_65533292_65536270_65537415_65540651
ES.26029.13	chr5	+	1326	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	31608	-477	31514	477	3prime_fragment	FALSE	canonical	3	148	junction_1	0	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAACCAAAAACCAAAC	4	True	NA	NA	False	NA	NA	NA	65537264	65541827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65537415_65540651
ES.26029.14	chr5	+	158	1	Intergenic	novelGene_21635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATAAATCTTT	577	False	NA	NA	False	NA	NA	NA	65537927	65538085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65537900_65538100
ES.26029.2	chr5	+	3835	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23545	-1121	23451	1121	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTGCGGTGACA	NA	False	NA	NA	False	AATAAA	-35	NA	65529201	65542471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.3	chr5	+	1036	3	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23571	4889	23477	-410	internal_fragment	FALSE	canonical	3	98	junction_2	20	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGGACTGGACCTCTA	NA	False	NA	NA	False	AATGAA	-19	NA	65529227	65536461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270
ES.26029.4	chr5	+	5638	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23571	-2950	23477	2950	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCTTAACTGGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	65529227	65544300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.5	chr5	+	3458	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23590	-789	23496	789	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCCAGTGTGGACTTTT	NA	False	NA	NA	False	NA	NA	NA	65529246	65542139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.6	chr5	+	2646	4	NNC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23496	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.9731738728258	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529246	65541350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65529804_65533022_65533292_65536270_65537392_65540651
ES.26029.7	chr5	+	2562	5	NNC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23496	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4978632088387	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTTGTCTTAGACT	NA	False	NA	21	True	AAAAAG	-3	NA	65529246	65541347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65529554_65529657_65529804_65533022_65533292_65536270_65537415_65540651
ES.26029.8	chr5	+	2293	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23590	376	23496	-376	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGAAAGCAAGGAACTT	NA	False	NA	NA	False	AAGAAA	-2	NA	65529246	65540974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
ES.2603.1	chr10	-	192	1	Intergenic	novelGene_1973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	38712814	38712622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_38712600_38712800
ES.26030.1	chr5	-	3579	1	Antisense	novelGene_ENSMUSG00000029195.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGGGGATGTAACTTTT	NA	False	NA	NA	False	NA	NA	NA	65542294	65538715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65538700_65542300
ES.26031.1	chr5	-	744	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	-5	-1	-5	1	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTCCTTGTCTTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	65548792	65545705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.11	chr5	-	749	8	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	5016.85754964892	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548773	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545811_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.14	chr5	-	1560	5	NIC	ENSMUSG00000047215.15	novel	680	7	NA	NA	14	0	intron_retention	FALSE	canonical	3	5084	junction_4	3071.29715063522	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548773	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.15	chr5	-	1856	3	ISM	ENSMUSG00000047215.15	ENSMUST00000118543.8	1193	5	-318	1	57	0	intron_retention	FALSE	canonical	3	12167	junction_2	1020.5	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548666	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65546495_65546820_65546954_65547730
ES.26031.16	chr5	-	687	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4621.57982971721	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65545785_65545904_65546017_65546411_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.17	chr5	-	708	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	5041.22963619968	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548215_65548288_65548336_65548718
ES.26031.19	chr5	-	3066	1	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	14	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	708	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548773	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545700_65548800
ES.26031.2	chr5	-	2931	2	NNC	ENSMUSG00000047215.15	novel	2690	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	0	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548743	65545706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65547016_65547121
ES.26031.20	chr5	-	1200	6	NIC	ENSMUSG00000047215.15	novel	680	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	5084	junction_5	3235.21748264317	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGTGTGTCCTTGTCT	NA	False	NA	-9	True	AATAAA	-13	NA	65548741	65545709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.21	chr5	-	1111	7	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	15	-2	intron_retention	FALSE	canonical	3	5084	junction_6	3067.5566643322	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGTGTGTCCTTGTCT	NA	False	NA	-9	True	AATAAA	-13	NA	65548772	65545709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545785_65545904_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.22	chr5	-	1857	6	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	5084	junction_5	3249.4373913033	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGTGTGTCCTTGTCT	NA	False	NA	-9	True	AATAAA	-13	NA	65548741	65545709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545785_65545904_65546495_65546820_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.5	chr5	-	1794	6	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5084	junction_5	3363.4440325357	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545785_65545904_65546023_65546413_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.6	chr5	-	681	8	NNC	ENSMUSG00000047215.15	novel	738	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4939.84668439276	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548742	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547741_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.7	chr5	-	2651	2	FSM	ENSMUSG00000047215.15	ENSMUST00000140879.2	2651	2	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_1	0	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65548336_65548718
ES.26031.8	chr5	-	1402	6	NIC	ENSMUSG00000047215.15	novel	738	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	5084	junction_5	2801.23648412625	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548735	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65545785_65545904_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26031.9	chr5	-	844	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-51	-113	13	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548774	65545707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ES.26032.1	chr5	+	1661	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	7	0	7	0	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6893	False	NA	48	True	AAAAAG	-11	NA	65548846	65566550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.10	chr5	+	4101	10	NNC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	-5	-37	intron_retention	FALSE	canonical	2	19	junction_9	115.351636312625	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGAAATTTCTTTTCT	6948	False	NA	11	True	TATAAA	-11	NA	65548901	65566513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65560100_65561510_65561582_65562672_65562785_65566180
ES.26032.11	chr5	+	1663	12	NNC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	-5	-30	intron_retention	FALSE	canonical	0	0	junction_10	146.199003964906	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCTTTTCTTAAAAAG	6948	False	NA	18	True	TATAAA	-18	NA	65548901	65566520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65565015_65565103_65566077
ES.26032.12	chr5	+	2689	9	NIC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	41	-32	intron_retention	FALSE	canonical	3	315	junction_8	30.8453805293435	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTTCTTTTCTTAAAA	6995	False	NA	16	True	TATAAA	-16	NA	65548948	65566518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555232_65557189_65557319_65559953_65560100_65561510_65562785_65566077
ES.26032.13	chr5	+	5480	5	ISM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	5898	258	-147	-258	intron_retention	FALSE	canonical	3	326	junction_1	25.3623737059448	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGGAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	65554737	65566292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510
ES.26032.14	chr5	+	4693	2	NNC	ENSMUSG00000029199.12	novel	419	2	NA	NA	1411	3773	intron_retention	TRUE	non_canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	65556295	65561034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65560273_65560318
ES.26032.3	chr5	+	2165	10	NIC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	-10	-16	intron_retention	FALSE	canonical	3	315	junction_9	34.5289286480228	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATTTATTTTTATTT	6919	False	NA	32	True	TATAAA	-32	NA	65548872	65566534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.4	chr5	+	2827	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	57	-1216	-10	-270	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTGTATGTGTGT	6943	False	NA	NA	False	TTTAAA	-17	NA	65548896	65567766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.5	chr5	+	4282	9	NIC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	-10	-35	intron_retention	FALSE	canonical	3	315	junction_8	33.6263940231479	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAATTTCTTTTCTTA	6943	False	NA	13	True	TATAAA	-13	NA	65548896	65566515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555232_65557189_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.6	chr5	+	1428	10	NIC	ENSMUSG00000029199.12	novel	1668	11	NA	NA	-10	-254	intron_retention	FALSE	canonical	3	315	junction_9	31.8398771633588	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAAGAAA	6943	False	NA	NA	False	NA	NA	NA	65548896	65566296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.7	chr5	+	1398	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	57	213	-10	-213	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCTATAACCCTGTAAA	6943	False	NA	NA	False	NA	NA	NA	65548896	65566337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.8	chr5	+	1494	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	16	1486	-8	0	multi-exon	FALSE	canonical	3	30	junction_1	106.686643962588	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6945	False	NA	48	True	AAAAAG	-11	NA	65548898	65566550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26032.9	chr5	+	1281	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	16	1699	-8	-213	multi-exon	FALSE	canonical	3	30	junction_1	106.686643962588	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCTATAACCCTGTAAA	6945	False	NA	NA	False	NA	NA	NA	65548898	65566337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ES.26033.1	chr5	-	3374	1	Antisense	novelGene_ENSMUSG00000029199.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGCCAGGCAGTGCA	NA	False	NA	NA	False	NA	NA	NA	65553323	65549949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65549900_65553300
ES.26033.2	chr5	-	2041	2	Antisense	novelGene_ENSMUSG00000029199.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAATGCCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	65553323	65549953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65551377_65552705
ES.26034.1	chr5	-	184	1	Intergenic	novelGene_21636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGGAAATCCAAAA	NA	False	NA	NA	False	NA	NA	NA	65554826	65554642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65554600_65554800
ES.26035.1	chr5	+	177	1	Intergenic	novelGene_21638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGGA	3954	False	NA	NA	False	NA	NA	NA	65582966	65583143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65583000_65583100
ES.26036.1	chr5	-	2777	12	Fusion	ENSMUSG00000105896.2_ENSMUSG00000029201.15	novel	2550	12	NA	NA	217	426	multi-exon	FALSE	canonical	2	3	junction_6	138.608074610058	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTAAGTGTATGAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	65593075	65570137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577705_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.10	chr5	-	2313	12	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	127.934900801053	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCTTCAATTTACGT	NA	False	NA	-16	True	AATAAA	-19	NA	65585748	65570566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
ES.26036.11	chr5	-	2470	11	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	162	0	intron_retention	FALSE	canonical	3	385	junction_9	37.1026953198821	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCTTCAATTTACGT	NA	False	NA	-16	True	AATAAA	-19	NA	65593130	65570566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.14	chr5	-	1853	9	NNC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-744	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.484029163825	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGATTCTTCAATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	65580893	65570569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65571413_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792
ES.26036.15	chr5	-	6250	10	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	225	-3	intron_retention	FALSE	canonical	3	385	junction_8	46.0506967012082	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGATTCTTCAATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	65593067	65570569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.16	chr5	-	2287	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	89	174	89	-171	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATCAACAGTATGG	NA	False	NA	NA	False	AATATA	-8	NA	65593203	65570737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.17	chr5	-	2139	12	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-15	-171	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	127.934900801053	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATCAACAGTATGG	NA	False	NA	NA	False	AATATA	-8	NA	65585745	65570737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
ES.26036.18	chr5	-	4276	11	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	125	-437	intron_retention	FALSE	canonical	3	385	junction_9	44.0323744533497	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTACAGACTGCACTTT	NA	False	NA	NA	False	AATAAA	-32	NA	65593167	65571003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.19	chr5	-	1929	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	176	445	176	-442	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTGTCTACAGACTGC	NA	False	NA	NA	False	AATAAA	-27	NA	65593116	65571008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.2	chr5	-	2758	12	FSM	ENSMUSG00000105896.2_ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	216	-424	216	424	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTTTTAAGTGTATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	65593076	65570139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.20	chr5	-	160	1	Intergenic	novelGene_21637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAATAAATATAA	NA	False	NA	NA	False	NA	NA	NA	65572545	65572385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65572400_65572500
ES.26036.21	chr5	-	1107	6	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	97	9354	97	779	5prime_fragment	FALSE	canonical	3	385	junction_4	43.0655314607866	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTTTGTGGAACCTCT	NA	False	NA	NA	False	AGTAAA	-17	NA	65593195	65579917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.3	chr5	-	2523	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	40	-13	40	13	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGTTTTATGTTCATA	NA	False	NA	0	True	AATAAA	-35	NA	65593252	65570550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.5	chr5	-	2335	12	NNC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-15	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	173.993967787525	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATTTACGTATGTTTT	NA	False	NA	-9	True	AATAAA	-26	NA	65585745	65570559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577705_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
ES.26036.6	chr5	-	6289	10	NNC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	125	3	intron_retention	FALSE	canonical	0	0	junction_5	153.546952645328	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAATTTACGTATGTTT	NA	False	NA	-10	True	AATAAA	-25	NA	65593167	65570560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65580126_65580573_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.7	chr5	-	4779	11	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	62	0	intron_retention	FALSE	canonical	3	385	junction_9	44.0323744533497	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65593230	65570563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ES.26036.8	chr5	-	4629	11	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	-40	0	intron_retention	FALSE	canonical	3	29	junction_10	134.125463652507	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65585770	65570563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65585656
ES.26036.9	chr5	-	6154	3	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	2201	0	intron_retention	FALSE	canonical	3	488	junction_1	2	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65577948	65570563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65574456_65574853_65574988_65575820
ES.26037.1	chr5	+	3008	1	Antisense	novelGene_ENSMUSG00000037822.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAATCCACTTACTTG	NA	False	NA	NA	False	NA	NA	NA	65605621	65608629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65605600_65608600
ES.26038.1	chr5	+	278	1	Intergenic	novelGene_21639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAAAAGTTTTTTGGA	NA	False	NA	NA	False	AATAGA	-34	NA	65609406	65609684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65609400_65609700
ES.26039.1	chr5	+	1321	1	Antisense	novelGene_ENSMUSG00000037822.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTGGAGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	65617998	65619319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65618000_65619300
ES.2604.1	chr10	+	158	1	Intergenic	novelGene_1974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	38733113	38733271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_38733100_38733300
ES.26040.1	chr5	+	160	1	Intergenic	novelGene_21640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	65628058	65628218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65628100_65628200
ES.26041.1	chr5	-	4032	6	NNC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.184477605138	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTTTCTGTTTGACTT	NA	False	NA	-3	True	AATAAA	-19	NA	65650306	65604186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65604752_65604842_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26041.10	chr5	-	1187	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	414	2959	74	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	65650329	65607145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26041.11	chr5	-	1110	6	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	184.420606223925	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGGTTTAGAATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65650180	65607147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65642396_65642471_65650078
ES.26041.12	chr5	-	1091	5	NNC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.351065068181	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGGTTTAGAATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65650189	65607147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625689_65625845_65650078
ES.26041.13	chr5	-	1007	5	NNC	ENSMUSG00000037822.13	novel	1056	5	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	187.89142476441	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGGTTTAGAATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65650358	65607147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607781_65610528_65610672_65617868_65617916_65625735_65625845_65650283
ES.26041.15	chr5	-	1072	6	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	187.862715832599	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTGGTTTAGAATCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65650162	65607147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65634668_65634723_65650078
ES.26041.16	chr5	-	758	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	448	3354	-71	-271	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGAGGGCTTTGTTG	NA	False	NA	-8	True	AGTAAA	-12	NA	65650295	65607540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26041.17	chr5	-	7339	1	FSM	ENSMUSG00000037822.13	ENSMUST00000198981.3	3456	1	563	-4446	34	4446	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAAAAAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	65650180	65642841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65642800_65650200
ES.26041.18	chr5	-	4921	1	FSM	ENSMUSG00000037822.13	ENSMUST00000198981.3	3456	1	452	-1917	-67	1917	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTTTTATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	65650291	65645370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65645400_65650300
ES.26041.19	chr5	-	4873	2	Genic_Genomic	ENSMUSG00000105835.2	novel	365	3	NA	NA	-119	-60601	multi-exon	FALSE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATGTTTTATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	65650295	65645370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_65647184_65647235
ES.26041.2	chr5	-	4241	1	NIC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	7427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTTTCTGTTTGACTT	NA	False	NA	-3	True	AATAAA	-19	NA	65608427	65604186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65604200_65608400
ES.26041.4	chr5	-	3849	6	NNC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.562232525364	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTTTCTGTTTGACTT	NA	False	NA	-3	True	AATAAA	-19	NA	65650328	65604186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65604752_65604842_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ES.26041.5	chr5	-	4127	5	NNC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	86	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	166.80883519766	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTTTTCTGTTTGACT	NA	False	NA	-4	True	AATAAA	-18	NA	65650317	65604187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607775_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26041.6	chr5	-	4110	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	449	1	-70	-1	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGTTTTCTGTTTGACT	NA	False	NA	-4	True	AATAAA	-18	NA	65650294	65604187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26041.7	chr5	-	4039	6	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	187.862715832599	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCGTTTTCTGTTTGA	NA	False	NA	-6	True	AATAAA	-16	NA	65650171	65604189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65634668_65634723_65650078
ES.26041.8	chr5	-	4124	7	NNC	ENSMUSG00000037822.13	novel	1177	6	NA	NA	75	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.660652079543	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTCGTTTTCTGTTTG	NA	False	NA	-7	True	AATAAA	-15	NA	65650328	65604190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65604752_65604842_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65642396_65642471_65650078
ES.26041.9	chr5	-	1405	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	413	2742	73	217	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTTCTGACTTATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	65650330	65606928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ES.26042.1	chr5	-	185	1	Intergenic	novelGene_21641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTATGGAGAAGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	65660404	65660219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65660200_65660400
ES.26043.1	chr5	+	178	1	Intergenic	novelGene_21642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCTCCA	NA	False	NA	NA	False	NA	NA	NA	65673664	65673842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65673700_65673800
ES.26044.1	chr5	-	158	1	Intergenic	novelGene_21643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	65680984	65680826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65680800_65681000
ES.26045.1	chr5	+	167	1	Antisense	novelGene_ENSMUSG00000105601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATATAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65692990	65693157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65693000_65693200
ES.26046.1	chr5	-	135	1	Intergenic	novelGene_21644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGTAAAAA	4630	False	NA	NA	False	NA	NA	NA	65693582	65693447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65693400_65693600
ES.26047.1	chr5	+	1103	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	-32	3822	-32	21	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAATAGTGTAAAAAT	NA	False	NA	41	True	ATTAAA	-42	NA	65694543	65752509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.10	chr5	+	3405	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	9	-1885	-6	-1289	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTTTTATATTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	65694627	65754983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.11	chr5	+	839	5	FSM	ENSMUSG00000029203.17	ENSMUST00000201984.4	1449	5	-5	615	-5	-5	multi-exon	FALSE	canonical	3	45	junction_1	582.178398345387	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694628	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.12	chr5	+	3434	6	NIC	ENSMUSG00000029203.17	novel	4893	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_2	521.777500473142	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694630	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65751892_65752217
ES.26047.13	chr5	+	2251	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	56	2586	-2	374	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGATGTGACGGCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	65694631	65753745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.15	chr5	+	919	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202601.4	890	6	-34	5	9	-5	multi-exon	FALSE	canonical	0	0	junction_2	546.724427842766	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694642	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.16	chr5	+	4673	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	27	-3171	12	-3	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGAATTTTCCCCAT	NA	False	NA	4	True	AATAAA	-12	NA	65694645	65756269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.17	chr5	+	956	7	NNC	ENSMUSG00000029203.17	novel	4893	7	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	635.058440005502	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGGGGAAATACTTTT	NA	False	NA	14	True	AATAAA	-25	NA	65694648	65752482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751877_65752217
ES.26047.19	chr5	+	949	7	NNC	ENSMUSG00000029203.17	novel	4893	7	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	503.727025944277	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694668	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65694890_65723331_65723430_65728881_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.2	chr5	+	3522	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	26	1345	-2	-1286	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTATATTTCTGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	65694601	65754986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.20	chr5	+	991	7	NNC	ENSMUSG00000029203.17	novel	780	3	NA	NA	68	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	641.276504758716	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694894	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65695155_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.21	chr5	+	282	1	Intergenic	novelGene_21647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65715338	65715620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65715300_65715600
ES.26047.22	chr5	+	175	1	Intergenic	novelGene_21648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	65741237	65741412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65741200_65741400
ES.26047.23	chr5	+	4267	3	Antisense	novelGene_ENSMUSG00000107050.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	325	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65744451	65874192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65744554_65744610_65748733_65874149
ES.26047.24	chr5	+	4344	3	FSM	ENSMUSG00000029203.17	ENSMUST00000202572.2	780	3	279	-3843	279	0	multi-exon	FALSE	canonical	3	1337	junction_2	72.5	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTTATATCTCATT	NA	False	NA	12	True	AATAAA	-20	NA	65749217	65756331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65749319_65751762_65751892_65752217
ES.26047.25	chr5	+	3638	1	ISM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	57658	460	3295	-401	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACTTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	65752233	65755871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65752200_65755900
ES.26047.26	chr5	+	3840	1	Antisense	novelGene_ENSMUSG00000029202.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGATATGGGCTGGTG	5564	False	NA	NA	False	NA	NA	NA	65786991	65790831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_65787000_65790800
ES.26047.27	chr5	+	597	1	Intergenic	novelGene_21652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65814495	65815092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65814500_65815100
ES.26047.28	chr5	+	153	1	Intergenic	novelGene_21653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	65841825	65841978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65841800_65842000
ES.26047.4	chr5	+	2106	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	43	2744	0	216	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTAAAAGGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	65694618	65753587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.5	chr5	+	4850	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	45	-2	2	2	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTATATCTCATTTC	NA	False	NA	14	True	AATAAA	-22	NA	65694620	65756333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.8	chr5	+	899	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	-6	3789	-6	-5	multi-exon	FALSE	canonical	3	526	junction_1	338.408628731597	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGGGAAATACTTTTA	NA	False	NA	15	True	AATAAA	-26	NA	65694627	65752483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26047.9	chr5	+	1616	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	52	3225	-6	8	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTTTAAAATGATAAAG	NA	False	NA	34	True	AATAAA	-35	NA	65694627	65753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ES.26048.1	chr5	-	371	1	Antisense	novelGene_ENSMUSG00000107362.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65699666	65699295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65699300_65699700
ES.26049.1	chr5	-	309	1	Intergenic	novelGene_21645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	65709725	65709416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65709400_65709700
ES.2605.1	chr10	-	178	1	Intergenic	novelGene_1975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	38742292	38742114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_38742100_38742300
ES.26050.1	chr5	-	233	1	Intergenic	novelGene_21646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATTTGTTAGCACTAGA	NA	False	NA	NA	False	NA	NA	NA	65710802	65710569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65710600_65710800
ES.26051.1	chr5	-	4533	4	NNC	ENSMUSG00000107102.2	novel	1286	2	NA	NA	301	2958	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCTACTTGCCAAAGT	3681	False	NA	NA	False	NA	NA	NA	65748482	65742100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65743118_65743323_65744555_65744611_65746277_65747862
ES.26051.2	chr5	-	180	1	Intergenic	novelGene_21649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAATACA	8840	False	NA	NA	False	NA	NA	NA	65743323	65743143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65743100_65743300
ES.26051.3	chr5	-	181	1	Intergenic	novelGene_21650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTAGGAGTG	5104	False	NA	NA	False	NA	NA	NA	65747059	65746878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65746900_65747100
ES.26052.1	chr5	-	8989	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	47	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCTCCAATTTTATTGA	2688	False	NA	NA	False	ATTAAA	-23	NA	65855569	65763061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.100	chr5	-	6726	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-16	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTGCATATTCTTGT	2730	False	NA	NA	False	GATAAA	-19	NA	65855527	65765282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.102	chr5	-	5408	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8442	-1272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATCTTTTTATCATGC	NA	False	NA	2	True	AATAAA	-23	NA	65864058	65766384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.103	chr5	-	9128	31	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	35	-1275	intron_retention	FALSE	canonical	0	0	junction_3	113.791178138827	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTATCTTTTTATCA	2676	False	NA	-1	True	AATAAA	-20	NA	65855581	65766387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.105	chr5	-	5715	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-7	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	2634	False	NA	-3	True	AATAAA	-18	NA	65855623	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.106	chr5	-	5330	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8353	-1277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	187.995467760363	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	65863969	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776961_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795886_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821299_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.107	chr5	-	5775	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-24	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.370686442528	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	2722	False	NA	-3	True	AATAAA	-18	NA	65855535	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65837916_65838062_65854105_65854281_65855092
ES.26052.108	chr5	-	5319	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-7196	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.766937266309	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	65862812	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65862677
ES.26052.11	chr5	-	6891	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.909986737853	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGGAAACGTGAATA	2703	False	NA	NA	False	AATAAA	-24	NA	65855554	65765115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785437_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.110	chr5	-	5285	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	37	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.672950212263	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	2678	False	NA	-3	True	AATAAA	-18	NA	65855579	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
ES.26052.112	chr5	-	5531	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	14	-1277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.339825177162	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	2760	False	NA	-3	True	AATAAA	-18	NA	65855497	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65780317_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.114	chr5	-	4981	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8406	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.571225361475	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCTTATCTTTTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	65864022	65766389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65863839
ES.26052.117	chr5	-	4908	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-7175	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	180.962435581415	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTCTTATCTTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	65862791	65766390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65862677
ES.26052.119	chr5	-	5521	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	12	-1278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	144.05641176439	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTCTTATCTTTTTA	2758	False	NA	-4	True	AATAAA	-17	NA	65855499	65766390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092_65855208_65855276
ES.26052.124	chr5	-	4812	9	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	540	-1278	intron_retention	FALSE	canonical	0	0	junction_3	203.592385356133	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAGTCTTATCTTTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	65785403	65766390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341
ES.26052.129	chr5	-	5613	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-52	-1279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.222428401874	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTATCTTTTT	2694	False	NA	-5	True	AATAAA	-16	NA	65855563	65766391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795206_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.132	chr5	-	7677	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-117	-1279	intron_retention	FALSE	canonical	0	0	junction_3	170.039800690717	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTATCTTTTT	2941	False	NA	-5	True	AATAAA	-16	NA	65855316	65766391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65780376_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785437_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.135	chr5	-	5560	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-7	-1279	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	144.05641176439	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTATCTTTTT	2739	False	NA	-5	True	AATAAA	-16	NA	65855518	65766391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092_65855402_65855449
ES.26052.138	chr5	-	5415	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-125	-1279	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	144.526459380065	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTATCTTTTT	2933	False	NA	-5	True	AATAAA	-16	NA	65855324	65766391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767532_65772601_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.141	chr5	-	4791	28	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-100	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	206.820717839984	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAAGTCTTATCTTTT	2958	False	NA	-6	True	AATAAA	-15	NA	65855299	65766392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784541_65784902_65785108_65785341_65785466_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
ES.26052.142	chr5	-	5715	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	23	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.397367241707	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAAGTCTTATCTTTT	2769	False	NA	-6	True	AATAAA	-15	NA	65855488	65766392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767532_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65837916_65838062_65854105_65854281_65855092
ES.26052.145	chr5	-	4962	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	46	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	146.930416682571	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTAAGTCTTATCTTTT	4095	False	NA	-6	True	AATAAA	-15	NA	65854162	65766392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823554_65854105
ES.26052.146	chr5	-	4071	24	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-13673	-1282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	170.623619876427	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATGTAAGTCTTATCTT	NA	False	NA	-8	True	AATAAA	-13	NA	65826239	65766394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809813_65826162
ES.26052.148	chr5	-	5399	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-23	-1609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCACCAGATTTTTA	2618	False	NA	NA	False	AGTAAA	-23	NA	65855639	65766721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.151	chr5	-	5176	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-49	-1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.337346666084	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTTAGAATGGTTTT	2697	False	NA	68	True	AATAAA	-24	NA	65855560	65766808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784486_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.152	chr5	-	4851	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	48	-1697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.672950212263	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGTTTAGAATGGTTT	2689	False	NA	67	True	AATAAA	-23	NA	65855568	65766809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
ES.26052.154	chr5	-	5134	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-20	-1697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.294065302553	922	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGTTTAGAATGGTTT	2726	False	NA	67	True	AATAAA	-23	NA	65855531	65766809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.157	chr5	-	4919	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8380	-1699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATCAGTTTAGAATGGT	NA	False	NA	65	True	AATAAA	-21	NA	65863996	65766811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.16	chr5	-	9028	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8365	-5	intron_retention	FALSE	canonical	0	0	junction_3	186.272303614225	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGTGTGGAAACGTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	65863981	65765117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801042_65801106_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.161	chr5	-	5186	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	36	-1763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGATTTCTCCCATTT	2677	False	NA	1	True	ATTAAA	-31	NA	65855580	65766875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.162	chr5	-	7195	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-30	-1770	intron_retention	FALSE	canonical	0	0	junction_3	111.524680777291	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCATATTATGATTTCT	3028	False	NA	-6	True	ATTAAA	-24	NA	65855229	65766882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.163	chr5	-	7522	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	4	-1773	intron_retention	FALSE	canonical	0	0	junction_3	147.2260538292	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTTCATATTATGATT	2750	False	NA	-9	True	ATTAAA	-21	NA	65855507	65766885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65780443_65781210_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.165	chr5	-	6447	29	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	67	-1776	intron_retention	FALSE	canonical	0	0	junction_3	155.015745579444	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAACACTTCATATTATG	2813	False	NA	-12	True	ATTAAA	-18	NA	65855444	65766888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
ES.26052.166	chr5	-	5044	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-38	-1776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.173602972441	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAACACTTCATATTATG	2708	False	NA	-12	True	ATTAAA	-18	NA	65855549	65766888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823554_65854105_65854281_65855092
ES.26052.167	chr5	-	5112	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-1777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.339825177162	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAACACTTCATATTAT	2679	False	NA	-13	True	ATTAAA	-17	NA	65855578	65766889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65780317_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.170	chr5	-	5308	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8082	-1780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.309959655214	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGTAAACACTTCATAT	NA	False	NA	-16	True	ATTAAA	-14	NA	65863698	65766892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863071
ES.26052.172	chr5	-	4814	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	41	-2025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTGCCACACAGGCGAG	2787	False	NA	NA	False	NA	NA	NA	65855470	65767137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.173	chr5	-	4320	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8387	-2305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGAAGCTAGCCTTCCT	NA	False	NA	NA	False	AATACA	-20	NA	65864003	65767417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.174	chr5	-	4633	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	40	-2310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.766937266309	907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAACGAAGCTAGCC	2681	False	NA	NA	False	AATACA	-15	NA	65855576	65767422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854279_65855092
ES.26052.175	chr5	-	189	1	FSM	ENSMUSG00000029202.13	ENSMUST00000201673.2	6051	1	-165	6027	-165	3510	mono-exon	FALSE	NA	NA	NA	NA	NA	835	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATCTAATCCCTTGGA	NA	False	NA	NA	False	NA	NA	NA	65769281	65769092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65769100_65769300
ES.26052.176	chr5	-	4959	32	FSM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-379	-434	38	434	multi-exon	FALSE	canonical	0	0	junction_2	110.823584157033	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATTTTTGTTGTTGTT	2679	False	NA	NA	False	NA	NA	NA	65855578	65772168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.178	chr5	-	4088	28	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-117	7232	-117	378	5prime_fragment	FALSE	canonical	3	463	junction_27	48.5571517097879	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGTCAGCCCTCCTT	2941	False	NA	NA	False	AATAAA	-16	NA	65855316	65779834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.179	chr5	-	4122	28	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-392	7473	25	137	5prime_fragment	FALSE	canonical	3	463	junction_27	48.5571517097879	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTGTTTGTGTGTTCT	2666	False	NA	NA	False	AATAAA	-27	NA	65855591	65780075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.18	chr5	-	6699	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8468	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	NA	False	NA	NA	False	AATAAA	-20	NA	65864084	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.181	chr5	-	4907	27	NIC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	37	114	intron_retention	FALSE	canonical	3	463	junction_26	49.373366200218	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGTGGTGTTTGTTTGT	2678	False	NA	NA	False	AATAAA	-4	NA	65855579	65780098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.182	chr5	-	3698	28	NNC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	-8334	101	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_27	101.525821619026	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATACTACTTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	65863950	65780111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.183	chr5	-	3994	28	NNC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	50	101	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	115.291685907988	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATACTACTTGT	2691	False	NA	NA	False	TTTAAA	-19	NA	65855566	65780111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65780376_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.184	chr5	-	3866	28	NNC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	109.426425790024	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTAAACTTATTGAGGA	2757	False	NA	NA	False	AGTAAA	-14	NA	65855500	65780211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785437_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.185	chr5	-	5672	10	ISM	ENSMUSG00000029202.13	ENSMUST00000200766.4	1974	16	8009	456	2694	19	internal_fragment	FALSE	canonical	3	577	junction_8	17.0822267030912	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGAAGACAAATACTGA	NA	False	NA	NA	False	NA	NA	NA	65799750	65780668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899
ES.26052.186	chr5	-	4336	27	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-379	8066	38	19	5prime_fragment	FALSE	canonical	3	463	junction_26	49.373366200218	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGAAGACAAATACTGA	2679	False	NA	NA	False	NA	NA	NA	65855578	65780668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.187	chr5	-	6489	1	NIC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-196	19	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	799	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGAAGACAAATACTGA	NA	False	NA	NA	False	NA	NA	NA	65787157	65780668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65780700_65787200
ES.26052.188	chr5	-	4281	27	NNC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	38	-7	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	111.266465439327	830	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2679	False	NA	NA	False	NA	NA	NA	65855578	65780694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785437_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.189	chr5	-	1764	10	NIC	ENSMUSG00000029202.13	novel	1974	16	NA	NA	-1649	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	191.195136567104	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCAGGGTTTGTT	NA	False	NA	NA	False	AATATA	-13	NA	65804093	65781159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675
ES.26052.190	chr5	-	156	1	Antisense	novelGene_ENSMUSG00000106696.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	793	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65784138	65783982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65784000_65784100
ES.26052.191	chr5	-	3623	22	NNC	ENSMUSG00000029202.13	novel	4146	32	NA	NA	-8401	6932	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_21	109.485065610962	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAATTGTGATCTTA	NA	False	NA	NA	False	AATATA	-17	NA	65864017	65788152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.192	chr5	-	3819	22	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-350	15633	-38	6849	5prime_fragment	FALSE	canonical	3	463	junction_21	47.8027409341381	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTATATCATTCTTT	2708	False	NA	NA	False	NA	NA	NA	65855549	65788235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.193	chr5	-	3141	22	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-402	16363	15	6119	5prime_fragment	FALSE	canonical	3	463	junction_21	47.8027409341381	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTGCTGCTTTATT	2656	False	NA	NA	False	NA	NA	NA	65855601	65788965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.194	chr5	-	177	1	Intergenic	novelGene_21651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	728	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65797480	65797303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65797300_65797500
ES.26052.195	chr5	-	3378	19	NNC	ENSMUSG00000029202.13	novel	2705	16	NA	NA	67	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.729021613309	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGTGGCTTTGTGGAA	2813	False	NA	NA	False	AATAAA	-12	NA	65855444	65799823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65800864_65801042_65801106_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.196	chr5	-	3193	17	ISM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	-379	27976	38	-1155	5prime_fragment	FALSE	canonical	3	463	junction_16	33.2381910420829	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAGAAAACTAAA	2679	False	NA	NA	False	NA	NA	NA	65855578	65800578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.197	chr5	-	4435	2	FSM	ENSMUSG00000029202.13	ENSMUST00000201034.2	462	2	-1328	-2645	-25	2645	multi-exon	FALSE	canonical	3	478	junction_1	0	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAATT	2721	False	NA	NA	False	NA	NA	NA	65855536	65820650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_65823655_65854105
ES.26052.198	chr5	-	760	3	ISM	ENSMUSG00000029202.13	ENSMUST00000200790.2	2705	16	70	20222	-35	-228	5prime_fragment	FALSE	canonical	3	463	junction_2	7.5	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTTTGGCTGATA	2711	False	NA	NA	False	AATAAA	-18	NA	65855546	65823523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65823655_65854105_65854281_65855092
ES.26052.199	chr5	-	3113	2	ISM	ENSMUSG00000029202.13	ENSMUST00000200790.2	2705	16	36	48354	36	-28360	5prime_fragment	FALSE	canonical	3	463	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCAAACTTCCAG	2677	False	NA	NA	False	NA	NA	NA	65855580	65851655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65854281_65855092
ES.26052.2	chr5	-	8689	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8400	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCTCCAATTTTATTGA	NA	False	NA	NA	False	ATTAAA	-23	NA	65864016	65763061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.200	chr5	-	3851	1	NIC	ENSMUSG00000029202.13	novel	2705	16	NA	NA	-38	-28403	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	2708	False	NA	NA	False	NA	NA	NA	65855549	65851698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65851700_65855500
ES.26052.201	chr5	-	1625	2	ISM	ENSMUSG00000029202.13	ENSMUST00000200790.2	2705	16	128	49750	23	-29756	5prime_fragment	FALSE	canonical	3	463	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	2769	False	NA	NA	False	NA	NA	NA	65855488	65853051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_65854281_65855092
ES.26052.202	chr5	-	4107	1	Intergenic	novelGene_21654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65862350	65858243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65858200_65862400
ES.26052.21	chr5	-	10161	12	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	1101	-7	intron_retention	FALSE	canonical	0	0	junction_3	177.233468846431	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	NA	False	NA	NA	False	AATAAA	-20	NA	65795158	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65789125_65791514_65791674_65792657_65792782_65795084
ES.26052.22	chr5	-	4705	4	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-852	-7	intron_retention	FALSE	canonical	0	0	junction_3	292.776744674542	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	NA	False	NA	NA	False	AATAAA	-20	NA	65778795	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962
ES.26052.24	chr5	-	6400	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-83	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.975808620449	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2975	False	NA	NA	False	AATAAA	-20	NA	65855282	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65780318_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65823450_65823655_65854105_65854281_65855092
ES.26052.25	chr5	-	9307	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-7	intron_retention	FALSE	canonical	0	0	junction_3	111.524680777291	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2679	False	NA	NA	False	AATAAA	-20	NA	65855578	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.26	chr5	-	6756	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.303082557641	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2708	False	NA	NA	False	AATAAA	-20	NA	65855549	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784486_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823554_65854105_65854281_65855092
ES.26052.27	chr5	-	6683	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-99	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	145.766937266309	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2959	False	NA	NA	False	AATAAA	-20	NA	65855298	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854304_65855092
ES.26052.28	chr5	-	6810	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	60	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.289601342466	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2806	False	NA	NA	False	AATAAA	-20	NA	65855451	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812242_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.30	chr5	-	6794	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.2260538292	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2708	False	NA	NA	False	AATAAA	-20	NA	65855549	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.32	chr5	-	9244	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	26	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.526459380065	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2667	False	NA	NA	False	AATAAA	-20	NA	65855590	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65770314_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.33	chr5	-	6439	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-113	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	146.339825177162	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAGTGTGGAAACGTG	2945	False	NA	NA	False	AATAAA	-20	NA	65855312	65765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777014_65780399_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.35	chr5	-	8274	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-39	-8	intron_retention	FALSE	canonical	0	0	junction_3	112.561076032832	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2707	False	NA	NA	False	AATAAA	-19	NA	65855550	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.38	chr5	-	7100	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8102	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.309959655214	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	NA	False	NA	NA	False	AATAAA	-19	NA	65863718	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863071
ES.26052.39	chr5	-	4476	5	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-674	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	309.859242237504	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	NA	False	NA	NA	False	AATAAA	-19	NA	65778617	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777124_65777170
ES.26052.4	chr5	-	7170	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8365	567	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGGCAGAACAGGTCT	NA	False	NA	NA	False	AATAAA	-30	NA	65863981	65764545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.42	chr5	-	6843	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	47	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	148.363195831079	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2688	False	NA	NA	False	AATAAA	-19	NA	65855569	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65823450_65823655_65854105_65854281_65855092
ES.26052.45	chr5	-	6535	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	226	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.538211799342	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	3284	False	NA	NA	False	AATAAA	-19	NA	65854973	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65854891
ES.26052.48	chr5	-	9790	20	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-814	-8	intron_retention	FALSE	canonical	0	0	junction_3	137.599845390624	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	NA	False	NA	NA	False	AATAAA	-19	NA	65808573	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487
ES.26052.49	chr5	-	6541	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8380	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.761453224204	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	NA	False	NA	NA	False	AATAAA	-19	NA	65863996	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821228_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.5	chr5	-	7048	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	109	277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCCTGACCATTATATAC	2855	False	NA	NA	False	NA	NA	NA	65855402	65764835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.50	chr5	-	6804	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.222428401874	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2774	False	NA	NA	False	AATAAA	-19	NA	65855483	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795206_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.51	chr5	-	6590	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-87	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.337346666084	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2971	False	NA	NA	False	AATAAA	-19	NA	65855286	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784486_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.52	chr5	-	6913	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-50	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.075105762199	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	2696	False	NA	NA	False	AATAAA	-19	NA	65855561	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772933_65776280_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.53	chr5	-	8183	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	34	-8	intron_retention	FALSE	canonical	0	0	junction_3	112.21822615314	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAAGTGTGGAAACGT	3092	False	NA	NA	False	AATAAA	-19	NA	65855165	65765120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.54	chr5	-	6235	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8395	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.571225361475	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAAGTGTGGAAACG	NA	False	NA	NA	False	AATAAA	-18	NA	65864011	65765121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65863839
ES.26052.55	chr5	-	6643	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-99	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	172.989477642428	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAAGTGTGGAAACG	2959	False	NA	NA	False	AATAAA	-18	NA	65855298	65765121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776963_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801477_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823651_65854113_65854281_65855092
ES.26052.56	chr5	-	6575	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8387	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.614760886334	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAAGTGTGGAAACG	NA	False	NA	NA	False	AATAAA	-18	NA	65864003	65765121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780399_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.57	chr5	-	6869	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.294065302553	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAAGTGTGGAAACG	2679	False	NA	NA	False	AATAAA	-18	NA	65855578	65765121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.6	chr5	-	5883	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	60	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.05641176439	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTTTTTTTTGAGA	2806	False	NA	NA	False	NA	NA	NA	65855451	65764903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65766352_65767497_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.62	chr5	-	6348	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	133	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.672950212263	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	2879	False	NA	NA	False	AATAAA	-17	NA	65855378	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
ES.26052.64	chr5	-	6901	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	36	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.881974290318	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	2677	False	NA	NA	False	AATAAA	-17	NA	65855580	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780376_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804506_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.66	chr5	-	6744	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	148.528782286578	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	2758	False	NA	NA	False	AATAAA	-17	NA	65855499	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.67	chr5	-	6294	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8406	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.343033017335	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	65864022	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854279_65863839
ES.26052.68	chr5	-	6102	29	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8387	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.85654785845	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	65864003	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65854105_65854281_65863839
ES.26052.69	chr5	-	6620	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8399	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.00241179582	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	65864015	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789118_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26052.7	chr5	-	7034	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-46	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACGTGAATATTCATG	2595	False	NA	NA	False	AATAAA	-30	NA	65855662	65765109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.71	chr5	-	6095	31	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-10973	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.325269043175	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	65823539	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785437_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795206_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450
ES.26052.73	chr5	-	6596	32	NIC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	38	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	144.057993582753	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAGAAGTGTGGAAAC	2679	False	NA	NA	False	AATAAA	-17	NA	65855578	65765122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_65767539_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.77	chr5	-	4906	3	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-493	-11	intron_retention	FALSE	canonical	3	576	junction_2	41	880	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGTAGAAGTGTGGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	65778436	65765123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286
ES.26052.84	chr5	-	6734	25	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-2309	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.80529659953	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATGTAGAAGTGTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	65814875	65765125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610
ES.26052.85	chr5	-	6831	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	40	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.173602972441	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATGTAGAAGTGTGGA	2681	False	NA	NA	False	AATAAA	-14	NA	65855576	65765125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823554_65854105_65854281_65855092
ES.26052.86	chr5	-	6820	21	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-853	-14	intron_retention	FALSE	canonical	0	0	junction_3	181.570124194483	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTATGTAGAAGTGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	65808612	65765126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795886_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487
ES.26052.87	chr5	-	6436	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8387	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.395967651482	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTATGTAGAAGTGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	65864003	65765126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65863839
ES.26052.88	chr5	-	6852	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-49	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.082765058319	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTATGTAGAAGTGTGG	2697	False	NA	NA	False	AATAAA	-13	NA	65855560	65765126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784486_65784902_65785108_65785341_65785466_65787261_65787393_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.91	chr5	-	6807	32	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.339825177162	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTATGTAGAAGTGTGG	2747	False	NA	NA	False	AATAAA	-13	NA	65855510	65765126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65780317_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.93	chr5	-	6719	34	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-100	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.388339474847	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTATGTAGAAGTGTG	2958	False	NA	NA	False	AATAAA	-12	NA	65855299	65765127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776399_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801042_65801106_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ES.26052.95	chr5	-	6598	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	135	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	145.766937266309	940	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATTATGTAGAAGTGT	3193	False	NA	NA	False	AATAAA	-11	NA	65855064	65765128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65854911
ES.26052.98	chr5	-	9722	31	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8366	-33	intron_retention	FALSE	canonical	0	0	junction_3	139.34706870098	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACCAAGAAATGCA	NA	False	NA	NA	False	CATAAA	-24	NA	65863982	65765145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
ES.26053.1	chr5	-	159	1	Intergenic	novelGene_21655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	65874636	65874477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65874500_65874600
ES.26054.1	chr5	-	334	1	Intergenic	novelGene_21656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65884140	65883806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65883800_65884100
ES.26055.1	chr5	-	175	1	Intergenic	novelGene_21657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65900435	65900260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65900300_65900400
ES.26056.1	chr5	-	226	1	Intergenic	novelGene_21658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCACTATGCCTAACG	8875	False	NA	NA	False	NA	NA	NA	65901657	65901431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65901400_65901700
ES.26057.1	chr5	+	9246	20	NIC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	-213	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	28.9209448779181	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	9982	False	NA	18	True	AATAAA	-16	NA	65920650	65987451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65920934_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.10	chr5	+	9306	20	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	27.6371422970797	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921340	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943352_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.11	chr5	+	6001	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	21	26	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAAAATCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	65921342	65984243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.12	chr5	+	9288	21	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	30.7602015598078	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921351	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.13	chr5	+	8864	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-99	-3457	42	-1	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921363	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.14	chr5	+	9265	21	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.3262659174412	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921363	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941709_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.15	chr5	+	8744	19	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.9024006863115	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921366	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65963630_65963746_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.16	chr5	+	8729	16	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.5424698338469	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921367	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966588_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.17	chr5	+	8845	18	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	46	-4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	26.4484875058949	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921367	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966509_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.18	chr5	+	8791	17	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	60	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	28.9789120525599	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921381	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.19	chr5	+	8829	19	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.1290829532426	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921396	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979240_65979320_65982614_65982739_65983947
ES.26057.2	chr5	+	8870	18	NIC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	-161	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	27.0318279659995	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65920702	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65920934_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.20	chr5	+	5510	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-66	-136	-66	-88	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTGTTTGTTTTTTA	NA	False	NA	NA	False	AAGAAA	-20	NA	65921396	65984129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.21	chr5	+	9229	21	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4358461490349	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921396	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65923359_65923436_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.22	chr5	+	9071	21	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.1782620440608	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65921439	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65964402_65964440_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.23	chr5	+	9267	22	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.3441865735985	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921446	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65923359_65923436_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945394_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.24	chr5	+	9056	19	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.3849870681661	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921446	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.26	chr5	+	9033	19	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.4880850120594	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921447	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.27	chr5	+	8787	18	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.5391775920583	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921447	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.28	chr5	+	6783	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-10	918	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACGGTGTTCACAAACA	NA	False	NA	NA	False	AATAAA	-32	NA	65921452	65985135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.29	chr5	+	9155	21	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.9529684004091	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921478	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951869_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.3	chr5	+	9194	21	NNC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4358461490349	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65920777	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65920934_65923359_65923436_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.30	chr5	+	8664	17	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.1267280555544	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921484	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.31	chr5	+	5447	17	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	46	16	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	28.9789120525599	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACCTGCAGTTTAAAAT	NA	False	NA	NA	False	ATTAAA	-45	NA	65921508	65984233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.32	chr5	+	8513	17	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	94	-104	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	28.9789120525599	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTACTTTTTTATTGAA	NA	False	NA	-86	True	TATAAA	-23	NA	65921556	65987347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.33	chr5	+	159	1	Intergenic	novelGene_21661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAAGTAGTATAA	NA	False	NA	NA	False	NA	NA	NA	65930548	65930707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_65930500_65930700
ES.26057.34	chr5	+	9088	17	NNC	ENSMUSG00000037795.15	novel	574	3	NA	NA	2343	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6963802507982	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	7669	False	NA	16	True	AATAAA	-14	NA	65942633	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65942962_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.36	chr5	+	9310	15	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	25692	1	6265	-1	3prime_fragment	FALSE	canonical	3	66	junction_1	14.8585164200226	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65946555	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.37	chr5	+	2093	6	ISM	ENSMUSG00000037795.15	ENSMUST00000201615.4	4767	14	26643	9848	7815	3229	internal_fragment	FALSE	canonical	3	66	junction_1	12.9243955371228	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTTTCAGATTCTGTC	NA	False	NA	NA	False	AATAAA	-2	NA	65948105	65964779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532
ES.26057.38	chr5	+	3933	12	ISM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	33970	-251	-2983	27	3prime_fragment	FALSE	canonical	3	78	junction_5	11.5915329600375	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAAAATCTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	65955432	65984244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.39	chr5	+	6077	8	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-1571	-2	intron_retention	FALSE	canonical	3	78	junction_1	13.6247074486473	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	9802	False	NA	16	True	AATAAA	-14	NA	65965502	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.4	chr5	+	6766	20	NIC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	-64	903	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	28.9209448779181	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTATTTTCAACATATA	NA	False	NA	NA	False	AATAAA	-17	NA	65920799	65985120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65920934_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.40	chr5	+	3635	8	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	46254	829	44	-829	3prime_fragment	FALSE	canonical	3	78	junction_1	13.6247074486473	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCCAGTTCTTTGCGG	167	False	NA	NA	False	ATTAAA	-18	NA	65967117	65986622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.41	chr5	+	4427	7	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	48440	4	2230	-4	3prime_fragment	FALSE	canonical	3	85	junction_1	10.9544511501033	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	1911	False	NA	14	True	AATAAA	-12	NA	65969303	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.42	chr5	+	4154	4	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	56579	2	-5142	-2	3prime_fragment	FALSE	canonical	3	99	junction_2	4.18993502999218	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	1459	False	NA	16	True	AATAAA	-14	NA	65977442	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.5	chr5	+	9086	21	NIC	ENSMUSG00000037795.15	novel	9055	20	NA	NA	34	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	33.5326706362616	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAGTGTGAAGAAATCC	NA	False	NA	16	True	AATAAA	-14	NA	65920897	65987449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65920934_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.6	chr5	+	5772	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	-205	-259	-64	35	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTGGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	65921257	65984252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.7	chr5	+	9256	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAGTGTGAAGAAATCCT	NA	False	NA	17	True	AATAAA	-15	NA	65921294	65987450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26057.8	chr5	+	8707	19	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	33.6307564258935	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCCAGTGTGAAGAAAT	NA	False	NA	14	True	AATAAA	-12	NA	65921305	65987447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948048_65948260_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979149_65979320_65982614_65982739_65983947
ES.26057.9	chr5	+	9395	21	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	32.6648128725698	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCAGTGTGAAGAAATC	NA	False	NA	15	True	AATAAA	-13	NA	65921338	65987448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943352_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ES.26058.1	chr5	-	2595	1	Intergenic	novelGene_21659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATAGGTTTCCCTGAACC	9003	False	NA	NA	False	NA	NA	NA	65926655	65924060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65924100_65926700
ES.26058.2	chr5	-	158	2	Antisense	novelGene_ENSMUSG00000037795.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	264	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4563	False	NA	NA	False	NA	NA	NA	65924688	65924127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65924236_65924638
ES.26058.3	chr5	-	169	1	Intergenic	novelGene_21660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAG	4562	False	NA	NA	False	NA	NA	NA	65924689	65924520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65924500_65924700
ES.26059.1	chr5	-	176	2	Antisense	novelGene_ENSMUSG00000106682.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	19	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAGACAA	NA	False	NA	NA	False	NA	NA	NA	65961574	65931287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_65931415_65961525
ES.26059.2	chr5	-	176	1	Intergenic	novelGene_21662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAGACAA	4195	False	NA	NA	False	NA	NA	NA	65931463	65931287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_65931300_65931500
ES.2606.1	chr10	+	2519	15	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	25	48669	-13	3852	5prime_fragment	FALSE	canonical	0	0	junction_6	2.71052370871575	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGCTTGAGGAATAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	38841535	38937515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
ES.2606.2	chr10	+	3239	15	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	40	47934	2	4587	5prime_fragment	FALSE	canonical	0	0	junction_6	2.71052370871575	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCTCCTGGAAAGATGG	NA	False	NA	NA	False	AATAAA	-22	NA	38841550	38938250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
ES.2606.3	chr10	+	5992	38	FSM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	47	7	-8	-7	multi-exon	TRUE	canonical	0	0	junction_6	2.38481928848171	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTATTTCTTATTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	38841557	38986177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957_38982078_38985883
ES.2606.4	chr10	+	109	1	Intergenic	novelGene_1976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTTGGGGATTTAGCT	NA	False	NA	NA	False	NA	NA	NA	38847753	38847862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_38847800_38847900
ES.26060.1	chr5	+	178	1	Intergenic	novelGene_21663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTGAGGGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	66001663	66001841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66001700_66001800
ES.26061.1	chr5	-	1197	1	Antisense	novelGene_ENSMUSG00000107254.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCTAGAGTTCTCTT	308	False	NA	NA	False	NA	NA	NA	66069667	66068470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_66068500_66069700
ES.26062.1	chr5	+	172	1	Intergenic	novelGene_21664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAATGTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	66079697	66079869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66079700_66079900
ES.26063.1	chr5	+	166	1	Intergenic	novelGene_21665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGTTATTCATAA	NA	False	NA	NA	False	NA	NA	NA	66080874	66081040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66080900_66081000
ES.26064.1	chr5	+	159	1	Intergenic	novelGene_21666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATCCAG	NA	False	NA	NA	False	NA	NA	NA	66088061	66088220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66088100_66088200
ES.26065.1	chr5	-	159	1	Intergenic	novelGene_21667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	7381	False	NA	NA	False	NA	NA	NA	66090683	66090524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66090500_66090700
ES.26066.1	chr5	-	216	1	Intergenic	novelGene_21668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTATGTAAACAATGT	9904	False	NA	NA	False	NA	NA	NA	66141029	66140813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66140800_66141000
ES.26067.1	chr5	+	165	1	Intergenic	novelGene_21669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66145045	66145210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66145000_66145200
ES.26068.1	chr5	-	265	1	Genic_Genomic	ENSMUSG00000054598.14	novel	NA	NA	NA	NA	356	80	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCTAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	66157205	66156940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_66156900_66157200
ES.26069.1	chr5	+	178	1	Intergenic	novelGene_21670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66163825	66164003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66163800_66164000
ES.2607.1	chr10	-	439	3	NIC	ENSMUSG00000051736.9	novel	721	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	11	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTGACTCTTCCATTT	NA	False	NA	-4	True	AATAAA	-27	NA	39009896	38994801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_38995031_39008242_39008375_39009818
ES.2607.2	chr10	-	237	2	ISM	ENSMUSG00000051736.9	ENSMUST00000136546.8	592	4	2036	-1	2036	0	3prime_fragment	FALSE	canonical	3	28	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGTGATGACAATGGTT	NA	False	NA	-17	True	AATAAA	-14	NA	38996274	38994814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_38995031_38996253
ES.26070.1	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000107304.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	66228645	66228821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_66228600_66228800
ES.26071.10	chr5	-	4896	6	NIC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.5481116747501	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGACTTTCTTTTC	NA	False	NA	-3	True	AATAAA	-15	NA	66308711	66173899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66308395
ES.26071.11	chr5	-	4932	8	FSM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	-37	0	-37	0	multi-exon	FALSE	canonical	0	0	junction_7	15.0427960926722	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGACTTTCTTTTC	NA	False	NA	-3	True	AATAAA	-15	NA	66309304	66173899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881_66309045_66309197
ES.26071.13	chr5	-	2605	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	250	2193	108	-148	3prime_fragment	FALSE	canonical	3	18	junction_6	10.0235833025033	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCCGCGCATCTAGGG	NA	False	NA	NA	False	NA	NA	NA	66309017	66176092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
ES.26071.14	chr5	-	2751	8	NNC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	28	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.9591372912203	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66309097	66176112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66279824_66279911_66308881
ES.26071.15	chr5	-	2358	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	145	2545	3	-117	3prime_fragment	FALSE	canonical	3	18	junction_6	10.0235833025033	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAAGAAGAATGTTATC	NA	False	NA	NA	False	AAGAAA	-35	NA	66309122	66176444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
ES.26071.16	chr5	-	3898	1	Intergenic	novelGene_21671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	66250644	66246746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66246700_66250600
ES.26071.3	chr5	-	4724	7	NIC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	110	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	17.7521516692735	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAGACTTTCTTTTCCT	NA	False	NA	-1	True	AATAAA	-17	NA	66309015	66173897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66176780_66179970_66180177_66183472_66184633_66203429_66203557_66255049_66255132_66308395_66308529_66308881
ES.26071.5	chr5	-	4667	6	NIC	ENSMUSG00000070780.12	novel	4643	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	13.4313067123047	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	2634	False	NA	-2	True	AATAAA	-16	NA	66211910	66173898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66211824
ES.26071.6	chr5	-	4977	9	NNC	ENSMUSG00000070780.12	novel	5211	9	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.5352323908182	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	NA	False	NA	-2	True	AATAAA	-16	NA	66309178	66173898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308395_66308529_66308881_66309045_66309160
ES.26071.7	chr5	-	5096	7	FSM	ENSMUSG00000070780.12	ENSMUST00000200775.4	3180	7	129	-2045	7	0	multi-exon	FALSE	canonical	0	0	junction_6	15.5071668019088	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGACTTTCTTTTC	NA	False	NA	-3	True	AATAAA	-15	NA	66308292	66173899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66307858
ES.26071.9	chr5	-	5066	8	NNC	ENSMUSG00000070780.12	novel	4895	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.9591372912203	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAAGACTTTCTTTTC	NA	False	NA	-3	True	AATAAA	-15	NA	66309148	66173899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66255884_66256022_66308881
ES.26072.1	chr5	+	178	1	Intergenic	novelGene_21672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGTTAAAATGTCAACAA	NA	False	NA	NA	False	NA	NA	NA	66320765	66320943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66320800_66320900
ES.26073.1	chr5	+	178	1	Intergenic	novelGene_21673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66349869	66350047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66349900_66350000
ES.26074.1	chr5	-	159	1	Intergenic	novelGene_21674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	66366391	66366232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66366200_66366400
ES.26075.1	chr5	-	185	1	Intergenic	novelGene_21675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAATTCATGC	NA	False	NA	NA	False	NA	NA	NA	66388861	66388676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66388700_66388900
ES.26076.1	chr5	+	156	1	Intergenic	novelGene_21676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	66394132	66394288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66394100_66394300
ES.26077.1	chr5	-	181	1	Intergenic	novelGene_21677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	66398820	66398639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66398600_66398800
ES.26078.1	chr5	-	188	1	Intergenic	novelGene_21678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGCAGCTACTATAAA	9642	False	NA	0	True	NA	NA	NA	66407220	66407032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66407000_66407200
ES.26079.1	chr5	-	181	1	Intergenic	novelGene_21679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAAACATTATACATATT	NA	False	NA	NA	False	NA	NA	NA	66419998	66419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66419800_66420000
ES.2608.1	chr10	+	6980	7	NIC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	-4	105	intron_retention	FALSE	canonical	3	143	junction_2	9.48243991104962	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39009967	39026198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39010104_39010201_39011037_39013129_39013188_39016818_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.10	chr10	+	2100	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-30	859	17	102	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTAAACGGCTGCTA	NA	False	NA	13	True	AATAAA	-13	NA	39009988	39026195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.11	chr10	+	5826	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-19	-2878	-19	1394	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAAGCGATACGCTACGC	NA	False	NA	NA	False	ATTAAA	-16	NA	39009999	39029932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.12	chr10	+	2184	11	NIC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	-19	99	intron_retention	FALSE	canonical	3	143	junction_2	7.81024967590665	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATGTGTAAACGGCTG	NA	False	NA	10	True	AATAAA	-10	NA	39009999	39026192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.13	chr10	+	5415	13	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	-19	1396	intron_retention	TRUE	canonical	0	0	junction_12	44.9378428745998	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCGATACGCTACGCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	39009999	39029934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454_39029316_39029728
ES.2608.14	chr10	+	4466	9	NNC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	-19	2	intron_retention	FALSE	canonical	3	5	junction_2	52.039498220102	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTTTCTATTTTATTA	NA	False	NA	9	True	NA	NA	NA	39009999	39025724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010967_39011037_39013129_39013188_39016818_39016935_39018250_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.15	chr10	+	2324	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-19	624	-19	337	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTGTTTCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	39009999	39026430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.16	chr10	+	2835	12	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	-18	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.632730675438	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAATGAGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	39010000	39026948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020376_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.17	chr10	+	5561	8	NIC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	-13	-311	intron_retention	FALSE	canonical	3	143	junction_2	8.98751969144333	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAAATGTTTTTTGAGA	NA	False	NA	NA	False	AATAAA	-27	NA	39010005	39026743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.18	chr10	+	5503	13	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	-10	3418	intron_retention	FALSE	canonical	0	0	junction_12	44.9378428745998	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTCTGTATGACAAAG	NA	False	NA	NA	False	NA	NA	NA	39010008	39031956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454_39029316_39031653
ES.2608.19	chr10	+	2124	12	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	-7	100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.8854767906257	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTGTAAACGGCTGC	NA	False	NA	11	True	AATAAA	-11	NA	39010011	39026193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010325_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.2	chr10	+	2971	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-43	1	4	-1	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCTCTGTGTTAAGTC	NA	False	NA	NA	False	AATATA	-17	NA	39009975	39027053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.20	chr10	+	4335	9	NNC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	-3	96	intron_retention	FALSE	non_canonical	0	0	junction_5	53.1588127689097	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGTGTAAACGG	NA	False	NA	7	True	AATAAA	-7	NA	39010015	39026189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018961_39019622_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.21	chr10	+	2264	13	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	1	96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.8167352869602	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGTGTAAACGG	NA	False	NA	7	True	AATAAA	-7	NA	39010019	39026189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39013430_39013622_39016818_39016935_39018250_39018373_39020370_39020569_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.22	chr10	+	4242	10	NNC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	1	105	intron_retention	FALSE	non_canonical	0	0	junction_6	50.7866513034408	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39010019	39026198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018961_39019622_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.23	chr10	+	1418	11	FSM	ENSMUSG00000019845.9	ENSMUST00000213459.2	4192	11	-44	2818	1	-2	multi-exon	FALSE	canonical	1	1	junction_7	48.3434587095297	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTGGTTTCTATTTT	NA	False	NA	5	True	NA	NA	NA	39010019	39025720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.24	chr10	+	2868	12	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	1	-76	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	45.4661803291084	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTCGTTTTTGTTTTA	NA	False	NA	NA	False	AAGAAA	-23	NA	39010019	39026978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010967_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.25	chr10	+	5552	9	NNC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	-1	105	intron_retention	FALSE	non_canonical	0	0	junction_5	53.1588127689097	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39010021	39026198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39018961_39019626_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.26	chr10	+	1840	11	FSM	ENSMUSG00000019845.9	ENSMUST00000213459.2	4192	11	-34	2386	7	59	multi-exon	FALSE	canonical	1	1	junction_7	48.3434587095297	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATCCAGTCCCTT	NA	False	NA	-30	True	NA	NA	NA	39010029	39026152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.27	chr10	+	2392	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	18	519	14	442	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACAGTATCACAGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	39010036	39026535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.28	chr10	+	5782	7	NIC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	18	2	intron_retention	FALSE	canonical	3	143	junction_2	9.30352382463524	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTTTCTATTTTATTA	NA	False	NA	9	True	NA	NA	NA	39010081	39025724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39010276_39010983_39011037_39013129_39013188_39016818_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.29	chr10	+	5282	5	NNC	ENSMUSG00000019845.9	novel	1562	9	NA	NA	-2321	96	intron_retention	FALSE	non_canonical	0	0	junction_1	71.9461604256961	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGTGTAAACGG	NA	False	NA	7	True	AATAAA	-7	NA	39016818	39026189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39018970_39019629_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.3	chr10	+	1637	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-42	1334	5	-2	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTGGTTTCTATTTT	NA	False	NA	5	True	NA	NA	NA	39009976	39025720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.4	chr10	+	1625	12	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.632730675438	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGGTGGTTTCTATTT	NA	False	NA	4	True	NA	NA	NA	39009981	39025719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020376_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.5	chr10	+	5648	8	NIC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	12	105	intron_retention	FALSE	canonical	3	143	junction_2	8.98751969144333	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39009983	39026198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39010104_39010201_39011037_39013129_39013188_39016818_39016935_39018250_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.6	chr10	+	3265	11	NNC	ENSMUSG00000019845.9	novel	4192	11	NA	NA	15	105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.0703519578284	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39009986	39026198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018970_39019631_39020559_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.8	chr10	+	2218	11	NNC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	17	96	intron_retention	FALSE	canonical	3	5	junction_1	61.759533676996	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGTGTAAACGG	NA	False	NA	7	True	AATAAA	-7	NA	39009988	39026189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39010276_39010967_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020569_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.2608.9	chr10	+	2656	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	-30	303	17	-303	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTGAGACAGTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	39009988	39026751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ES.26080.1	chr5	+	2796	1	Intergenic	novelGene_21680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66488793	66491589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66488800_66491600
ES.26081.1	chr5	+	654	4	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGCTTGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	66499850	66502879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_66499939_66500078_66500212_66500896_66500982_66502531
ES.26081.2	chr5	+	752	3	Antisense	novelGene_ENSMUSG00000029207.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	2.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACACGTGCTTGTATCT	NA	False	NA	NA	False	NA	NA	NA	66499890	66502877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_66500212_66500896_66500982_66502531
ES.26082.1	chr5	+	1727	1	Intergenic	novelGene_21684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGCAATAAAATGACTCAT	NA	False	NA	NA	False	NA	NA	NA	66726514	66728241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66726500_66728200
ES.26083.1	chr5	+	3031	1	Intergenic	novelGene_21685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTACCACAAAGCATCT	NA	False	NA	NA	False	NA	NA	NA	66730333	66733364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66730300_66733400
ES.26084.1	chr5	+	1143	1	Intergenic	novelGene_21686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1446	False	NA	NA	False	NA	NA	NA	66747322	66748465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66747300_66748500
ES.26085.1	chr5	-	3115	17	NNC	ENSMUSG00000029207.17	novel	1919	6	NA	NA	-2	15472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.0353102490634	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTGCCTCCATGCAT	NA	False	NA	NA	False	AATAAA	-24	NA	66776033	66440573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66441095_66442144_66442249_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.10	chr5	-	6644	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-110	-8	-7	5	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGGAGGTTCTGCTTT	NA	False	NA	6	True	ATTAAA	-21	NA	66776134	66456062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.12	chr5	-	6459	16	NNC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	23573	3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	30.5195019618604	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATGGGAGGTTCTGCT	NA	False	NA	4	True	ATTAAA	-19	NA	66752410	66456064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.13	chr5	-	6294	15	NNC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	23579	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	26.7886665039756	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGTAATGGGAGGTTCT	NA	False	NA	1	True	ATTAAA	-16	NA	66752404	66456067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66752306
ES.26085.16	chr5	-	6603	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-157	-113	-36	1	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTAATGGGAGGTT	NA	False	NA	-1	True	ATTAAA	-14	NA	66776163	66456069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.17	chr5	-	6360	15	NIC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	27.1988144999756	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	-2	True	ATTAAA	-13	NA	66776036	66456070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66700804_66700961_66775910
ES.26085.2	chr5	-	1380	7	NNC	ENSMUSG00000029207.17	novel	599	7	NA	NA	-25058	1602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.0615610998275	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGTATGTGTCTGAA	4567	False	NA	NA	False	AATAAA	-12	NA	66520083	66454443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66455218_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060
ES.26085.23	chr5	-	5646	15	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-9	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.6170484881502	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCACCTTAGTAATGGGA	NA	False	NA	-5	True	ATTAAA	-10	NA	66775992	66456073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66459524_66466496_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.24	chr5	-	6394	16	NIC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	36.9476506545259	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	False	NA	-9	True	ATTAAA	-6	NA	66776014	66456077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66700804_66700961_66775910
ES.26085.25	chr5	-	6499	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	18627	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.5129060624282	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	False	NA	-9	True	ATTAAA	-6	NA	66757356	66456077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66757199
ES.26085.26	chr5	-	6481	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23596	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.0657326213486	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCACCTTAGTAA	NA	False	NA	-10	True	ATTAAA	-5	NA	66752387	66456078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465054_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.29	chr5	-	6268	15	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-2	-51	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	32.0264559005679	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTATTTTCTGTATT	NA	False	NA	-9	True	AATACA	-18	NA	66776033	66456121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66775910
ES.26085.3	chr5	-	7214	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-62	-819	33	682	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTTTGATTCTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	66776068	66455363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.31	chr5	-	6377	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23600	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66752383	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.32	chr5	-	6380	17	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23600	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.6502103780609	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66752383	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466162_66466229_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.33	chr5	-	6182	15	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	32.9570685490524	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66776014	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66775910
ES.26085.34	chr5	-	6394	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-61	0	34	0	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66776067	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.36	chr5	-	6462	17	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	37.2625817677734	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66776052	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66640035_66640116_66649400_66649516_66700804_66700961_66775910
ES.26085.38	chr5	-	6472	17	NNC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	18619	0	intron_retention	FALSE	canonical	0	0	junction_2	45.2541434567046	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66757364	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466162_66466229_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520056_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66757199
ES.26085.39	chr5	-	6456	18	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	23587	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.2382729477041	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66752396	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466162_66466229_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.4	chr5	-	7126	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23604	679	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATAGTAGTTTGATTCT	NA	False	NA	NA	False	AATAAA	-33	NA	66752379	66455366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.41	chr5	-	6376	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	31.1528489868904	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66775987	66456182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549616_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.42	chr5	-	6318	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23592	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTTGACTCCTTGAT	NA	False	NA	-74	True	AATAAA	-12	NA	66752391	66456186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.44	chr5	-	4473	4	NNC	ENSMUSG00000029207.17	novel	548	4	NA	NA	90	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.0209827623619	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTTTGACTCCTTGA	NA	False	NA	-75	True	AATAAA	-11	NA	66649424	66456187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66459896_66608954_66609627_66619440_66619510_66649400
ES.26085.46	chr5	-	6289	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	23703	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	31.5556651015313	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATCTTTGACTCCTTG	NA	False	NA	-76	True	AATAAA	-10	NA	66752280	66456188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752225
ES.26085.48	chr5	-	5901	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-20	645	-13	-533	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGCACTGCTAATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	66776044	66456715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.49	chr5	-	5838	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23606	-533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGCACTGCTAATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	66752377	66456715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.5	chr5	-	6879	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-42	-504	-17	367	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGTGTTGTCTGGT	NA	False	NA	NA	False	AATAAA	-27	NA	66776048	66455678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.51	chr5	-	6054	18	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	-5	-535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.0911721549257	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTGGCACTGCTAATT	NA	False	NA	NA	False	ATTAAA	-19	NA	66776036	66456717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752934_66753098_66775910
ES.26085.52	chr5	-	5838	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-40	535	-15	-535	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTGGCACTGCTAATT	NA	False	NA	NA	False	ATTAAA	-19	NA	66776046	66456717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.54	chr5	-	5417	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-90	1006	5	815	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATCTTTACTGGGTATG	NA	False	NA	NA	False	AATATA	-20	NA	66776096	66457188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.55	chr5	-	5335	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23593	769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.6808772313686	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCTATTTTTACTG	NA	False	NA	NA	False	AATACA	-20	NA	66752390	66457234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.56	chr5	-	5289	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-1	1238	-1	695	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTGTGTGTCTTATC	NA	False	NA	NA	False	NA	NA	NA	66776025	66457308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.58	chr5	-	3923	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	21078	-587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.3478162012185	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTCTTGTTTACATTGT	NA	False	NA	NA	False	CATAAA	-13	NA	66754905	66458590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66754874
ES.26085.59	chr5	-	3499	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23600	154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCTGGAAAATGAAATATT	NA	False	NA	NA	False	ATTAAA	-26	NA	66752383	66459060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.61	chr5	-	3545	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-12	2993	-5	151	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTGGAAAATGAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	66776036	66459063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.62	chr5	-	3455	16	FSM	ENSMUSG00000029207.17	ENSMUST00000162366.8	6540	16	87	2998	0	149	multi-exon	FALSE	canonical	3	21	junction_4	23.9298976178336	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCACACCTGGAAAATGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	66776014	66459065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.63	chr5	-	3229	16	NIC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	37.8098164796157	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCAGACTGGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	66776014	66459201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66775910
ES.26085.64	chr5	-	3421	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	-108	3020	3	12	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGTTTTCAGACTGGT	NA	False	NA	NA	False	ATTAAA	-36	NA	66776114	66459202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.66	chr5	-	3512	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	-119	3133	-16	11	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGGTTTTCAGACTGG	NA	False	NA	NA	False	ATTAAA	-35	NA	66776143	66459203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.67	chr5	-	3295	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23587	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752396	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.7	chr5	-	6891	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23573	350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGTTCATTCGCT	NA	False	NA	NA	False	AATAAA	-10	NA	66752410	66455695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.71	chr5	-	3376	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23569	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.8998836434113	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752414	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.72	chr5	-	3259	16	NNC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	23593	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	34.4638941502553	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752390	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608840_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.73	chr5	-	3237	16	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23593	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.1713097612446	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752390	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66700804_66700961_66752306
ES.26085.74	chr5	-	3206	15	NIC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	27.9249175541874	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66776067	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66775910
ES.26085.75	chr5	-	3361	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23602	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.5129060624282	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752381	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752225
ES.26085.77	chr5	-	3209	15	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	31.2267056036519	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66776026	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66700804_66700961_66775910
ES.26085.78	chr5	-	3528	17	NNC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	23652	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.4683143345615	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752331	66459214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700741_66700961_66752134
ES.26085.8	chr5	-	6220	13	NIC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	-2	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	37.1528374869717	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGAGGTTCTGCTTTCG	NA	False	NA	8	True	ATTAAA	-23	NA	66776033	66456060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66557418_66557625_66608810_66609627_66619440_66619510_66700804_66700961_66775910
ES.26085.82	chr5	-	3719	18	NNC	ENSMUSG00000029207.17	novel	3362	18	NA	NA	21069	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.5731204897561	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66754914	66459230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752934_66753098_66754613
ES.26085.83	chr5	-	3221	16	NNC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	21078	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	31.5556651015313	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	ATTAAA	-6	NA	66754905	66459232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66754874
ES.26085.84	chr5	-	3158	16	NIC	ENSMUSG00000029207.17	novel	6632	16	NA	NA	-1	-149	combination_of_known_junctions	FALSE	canonical	3	27	junction_11	22.2297098496584	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTGGCTGTTGGCGTC	NA	False	NA	NA	False	NA	NA	NA	66776025	66459379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.85	chr5	-	2433	11	NNC	ENSMUSG00000029207.17	novel	1919	6	NA	NA	-21	37778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3769649570197	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGGTTTGTTGGTTT	NA	False	NA	NA	False	AGTAAA	-35	NA	66776052	66519186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66519694_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.86	chr5	-	3621	1	Intergenic	novelGene_21681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66565343	66561722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66561700_66565300
ES.26085.87	chr5	-	177	1	Intergenic	novelGene_21682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTTATTAAGAAAA	1074	False	NA	NA	False	NA	NA	NA	66593974	66593797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66593800_66594000
ES.26085.88	chr5	-	3533	6	NNC	ENSMUSG00000029207.17	novel	652	5	NA	NA	3	13925	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.2091825979578	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGCTCAGTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	66776021	66595399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_66597666_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.89	chr5	-	5902	5	Fusion	ENSMUSG00000106706.2_ENSMUSG00000029207.17	novel	652	5	NA	NA	499	5152	multi-exon	FALSE	canonical	3	39	junction_4	27.444261695298	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGACTACTCTGTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	66752414	66604172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
ES.26085.9	chr5	-	6387	16	NIC	ENSMUSG00000029207.17	novel	6526	17	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	37.8098164796157	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGGAGGTTCTGCTTT	NA	False	NA	6	True	ATTAAA	-21	NA	66776033	66456062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66775910
ES.26085.90	chr5	-	172	1	Intergenic	novelGene_21683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66605029	66604857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66604900_66605000
ES.26085.91	chr5	-	3223	5	ISM	ENSMUSG00000029207.17	ENSMUST00000160185.8	1935	6	-98	49993	3	2367	5prime_fragment	FALSE	canonical	3	66	junction_4	16.2941707368003	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGTTACCAGGGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	66776124	66606957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ES.26085.92	chr5	-	4775	1	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	1518	37	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCCAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66702782	66698007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_66698000_66702800
ES.26085.93	chr5	-	4580	1	FSM	ENSMUSG00000106706.2	ENSMUST00000201865.2	3109	1	-1667	196	-1667	-196	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66754580	66750000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_66750000_66754600
ES.26086.1	chr5	+	1069	1	Intergenic	novelGene_21687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGCCGACATTTAGG	7175	False	NA	NA	False	NA	NA	NA	66778113	66779182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66778100_66779200
ES.26087.1	chr5	+	1204	8	NNC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.588113506231	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGTTTTTATTTTCT	NA	False	NA	30	True	AATAAA	-19	NA	66833400	66844574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_66833675_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ES.26087.2	chr5	+	1521	8	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-3	1	intron_retention	FALSE	canonical	3	449	junction_3	34.4211610282194	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTGGTTTTTATTTTC	NA	False	NA	29	True	AATAAA	-18	NA	66833581	66844573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_66833666_66833778_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ES.26087.3	chr5	+	5656	4	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	449	junction_3	26.4701089281224	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCAGCTGGTTTTTATT	NA	False	NA	26	True	AATAAA	-15	NA	66833583	66844570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_66833666_66833778_66834416_66837005_66837157_66839784
ES.26088.1	chr5	-	188	1	Intergenic	novelGene_21688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66843236	66843048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_66843000_66843200
ES.26089.1	chr5	-	832	2	Antisense	novelGene_ENSMUSG00000107300.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTGTATGGGAATC	NA	False	NA	NA	False	AATAAA	-22	NA	66847284	66844672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_66845383_66847162
ES.26089.2	chr5	-	549	2	Antisense	novelGene_ENSMUSG00000107300.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGGGTGTGCACTTTA	NA	False	NA	NA	False	CATAAA	-16	NA	66847284	66844955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_66845383_66847162
ES.2609.1	chr10	+	236	1	Intergenic	novelGene_1977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAACTTACTAGCTCAGA	NA	False	NA	NA	False	NA	NA	NA	39055394	39055630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39055400_39055600
ES.26090.1	chr5	+	281	1	Intergenic	novelGene_21689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	66851589	66851870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_66851600_66851900
ES.26091.1	chr5	+	5168	25	NIC	ENSMUSG00000037736.21	novel	5050	26	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_1	0.563656219102862	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATACTAACAGAGTACTT	4691	False	NA	NA	False	AATAAA	-20	NA	66903176	67213558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_66903349_67015225_67015297_67039241_67039312_67111011_67111119_67116930_67116962_67118499_67118611_67126418_67126615_67131752_67132006_67154462_67154590_67155989_67156148_67156322_67156732_67159770_67159993_67173807_67173899_67174959_67175121_67179234_67179341_67183414_67183456_67184830_67184912_67186100_67186194_67187044_67187150_67188168_67188294_67190420_67190543_67191508_67191633_67201688_67201798_67204041_67204145_67211578
ES.26092.1	chr5	-	232	1	Intergenic	novelGene_21690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	67291649	67291417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67291400_67291600
ES.26093.1	chr5	+	1256	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	95	4896	9	-94	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTATGTCTGTTGTGAGT	NA	False	NA	50	True	AAAAAG	-36	NA	67418002	67443908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.10	chr5	+	2691	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	106	3450	20	1352	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTACAAGATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	67418013	67445354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.11	chr5	+	1926	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-17	3413	-16	1389	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTGTCGTGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	67418022	67445391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.12	chr5	+	4086	8	NNC	ENSMUSG00000037720.17	novel	5322	9	NA	NA	-14	1101	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	176.130980945941	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTCTAATGATGTT	NA	False	NA	17	True	AATAAA	-24	NA	67418024	67445103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67424319_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.13	chr5	+	5272	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-14	64	-13	-64	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATCTAACATTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	67418025	67448740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.14	chr5	+	1369	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-8	3961	-7	841	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCAGTTTTCTTTTT	NA	False	NA	NA	False	AATACA	-15	NA	67418031	67444843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.15	chr5	+	1028	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	139	5080	0	-278	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAAGCCTTTAACACT	NA	False	NA	NA	False	CATAAA	-39	NA	67418046	67443724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.16	chr5	+	4020	7	NIC	ENSMUSG00000037720.17	novel	6247	8	NA	NA	0	-130	intron_retention	FALSE	canonical	3	347	junction_1	41.2744876810522	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGAAATTTGTTTTA	NA	False	NA	14	True	AATACA	-18	NA	67418046	67443872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.17	chr5	+	592	4	FSM	ENSMUSG00000037720.17	ENSMUST00000162543.8	664	4	69	3	16	-3	multi-exon	FALSE	canonical	3	347	junction_1	54.4691553898983	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCATCTCTCAATGTT	NA	False	NA	NA	False	TATAAA	-26	NA	67418062	67421952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612
ES.26093.18	chr5	+	8957	7	NIC	ENSMUSG00000037720.17	novel	6247	8	NA	NA	21	26	intron_retention	FALSE	canonical	3	347	junction_1	41.2744876810522	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACATTTACAGTCAGAA	NA	False	NA	NA	False	AATAAA	-44	NA	67418067	67448830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.19	chr5	+	3328	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	37	1957	-20	-1957	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTCTGGAGTGGCGTG	NA	False	NA	NA	False	AGTAAA	-45	NA	67418076	67446847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.2	chr5	+	1253	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-29	4098	17	704	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTTGCATGATTGG	NA	False	NA	10	True	TATAAA	-20	NA	67418010	67444706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.20	chr5	+	2838	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	194	3215	5	1587	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCAGAATTTCATTATTT	NA	False	NA	NA	False	NA	NA	NA	67418101	67445589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.21	chr5	+	1265	9	NIC	ENSMUSG00000037720.17	novel	5322	9	NA	NA	5	-163	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	178.575439240675	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCATGAAATACATTTA	NA	False	NA	-19	True	GATAAA	-33	NA	67418101	67443839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67418150_67418306_67418377_67419820_67419998_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.22	chr5	+	2092	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	194	3961	5	841	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCAGTTTTCTTTTT	NA	False	NA	NA	False	AATACA	-15	NA	67418101	67444843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.23	chr5	+	3385	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	194	2668	5	2134	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATGCTTTTGAAAGAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	67418101	67446136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.24	chr5	+	2606	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	69	2647	12	2155	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGAGAAAGCTAATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	67418108	67446157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.25	chr5	+	1231	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	-4	4937	-4	-135	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATTCTGAAATTTG	NA	False	NA	9	True	AATACA	-13	NA	67418143	67443867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.26	chr5	+	6179	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	-3	-12	-3	12	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTATGTTGTACAAGAAC	NA	False	NA	NA	False	AATAAA	-30	NA	67418144	67448816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.27	chr5	+	2460	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	-2	3706	-2	1096	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	12	True	AATAAA	-19	NA	67418145	67445098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.28	chr5	+	1905	8	ISM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	131	3443	23	1359	3prime_fragment	FALSE	canonical	3	67	junction_7	130.643931105482	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATGTGTTTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	67418170	67445361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.29	chr5	+	2230	6	ISM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	2924	3706	2833	1096	3prime_fragment	FALSE	canonical	3	385	junction_3	30.8350449975349	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	12	True	AATAAA	-19	NA	67421071	67445098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.3	chr5	+	2444	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	103	3700	17	1102	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATTTCTAATGATGTTT	NA	False	NA	18	True	AATAAA	-25	NA	67418010	67445104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.30	chr5	+	1437	7	ISM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	3032	3706	2833	1096	3prime_fragment	FALSE	canonical	3	67	junction_6	134.168633525956	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	12	True	AATAAA	-19	NA	67421071	67445098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.31	chr5	+	3073	6	NNC	ENSMUSG00000037720.17	novel	664	4	NA	NA	3680	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	187.015507378399	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATAATGTTTTATCTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	67421918	67448732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67424205_67425853_67425988_67441482_67441567_67443438_67443560_67444352_67444521_67448452
ES.26093.4	chr5	+	4888	7	NNC	ENSMUSG00000037720.17	novel	6247	8	NA	NA	17	1096	intron_retention	FALSE	canonical	1	1	junction_4	158.718566441779	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACTGATTTCTAATG	NA	False	NA	12	True	AATAAA	-19	NA	67418010	67445098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67424319_67425853_67425988_67441482_67441567_67443438
ES.26093.5	chr5	+	5391	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-29	-40	17	40	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTCAGCTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	67418010	67448844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.6	chr5	+	2042	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	104	4101	18	701	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTCACTGTTGCATGAT	NA	False	NA	7	True	TATAAA	-17	NA	67418011	67444703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.7	chr5	+	6143	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	104	0	18	0	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTTAGAAATGCTATG	NA	False	NA	NA	False	AATAAA	-18	NA	67418011	67448804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26093.8	chr5	+	1647	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-27	3702	19	1100	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGATTTCTAATGATGT	NA	False	NA	16	True	AATAAA	-23	NA	67418012	67445102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ES.26093.9	chr5	+	4184	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	105	1958	19	-1958	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGTCTGGAGTGGCGT	NA	False	NA	NA	False	AGTAAA	-44	NA	67418012	67446846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ES.26094.1	chr5	+	3060	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	-6	2657	-6	0	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	380	False	NA	15	True	AATAAA	-18	NA	67464291	67513129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.10	chr5	+	2881	16	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	28	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	109.607096282839	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGGTGGAAAATCATG	395	False	NA	43	True	ATTAAA	-34	NA	67464306	67513157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.11	chr5	+	3049	3	NNC	ENSMUSG00000029221.16	novel	383	3	NA	NA	0	434	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	217.5	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTCTTTTTTTTTAAT	395	False	NA	NA	False	AATAAA	-11	NA	67464306	67476692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67474045
ES.26094.12	chr5	+	2898	16	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.817786693939	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTACGGTAGTTTTC	395	False	NA	11	True	AATAAA	-14	NA	67464306	67513125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67501872_67501913_67502919_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.14	chr5	+	5343	17	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	211	junction_11	76.1789628112644	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	395	False	NA	13	True	AATAAA	-16	NA	67464306	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.15	chr5	+	3034	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.870163441019	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACGGTAGTTTTCAAT	395	False	NA	14	True	AATAAA	-17	NA	67464306	67513128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487245_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.16	chr5	+	3406	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	10	2295	0	362	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGTAACAGTTTCCAG	396	False	NA	NA	False	AATAAA	-22	NA	67464307	67513491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.18	chr5	+	3116	19	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.097171292629	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	396	False	NA	7	True	AATAAA	-10	NA	67464307	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67483890_67483971_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.19	chr5	+	2952	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.876638780208	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	396	False	NA	13	True	AATAAA	-16	NA	67464307	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499483_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.2	chr5	+	1280	11	ISM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	-6	16109	-6	171	5prime_fragment	FALSE	canonical	3	324	junction_10	34.4443028670925	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTAGTTGTGGTTTTG	380	False	NA	NA	False	NA	NA	NA	67464291	67499677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436
ES.26094.20	chr5	+	2906	17	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	110.635592713195	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	396	False	NA	7	True	AATAAA	-10	NA	67464307	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67509994_67510109_67511874
ES.26094.21	chr5	+	5747	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	1	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	108.35153604505	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTTACCCTAAAAAT	397	False	NA	NA	False	ACTAAA	-11	NA	67464308	67515827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503462_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.22	chr5	+	1015	10	ISM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	12	18443	2	-2163	5prime_fragment	FALSE	canonical	3	337	junction_2	29.9769458742984	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCCGTAAGTCAATGAGA	398	False	NA	NA	False	NA	NA	NA	67464309	67497343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293
ES.26094.24	chr5	+	3001	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	108.35153604505	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	410	False	NA	7	True	AATAAA	-10	NA	67464321	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503020_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.26	chr5	+	2668	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	32	3011	22	-354	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAAGCGTGGGCTGTGCTGT	418	False	NA	NA	False	AGTAAA	-11	NA	67464329	67512775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.27	chr5	+	5741	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	46	-76	36	76	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGAATTTGTCATTCAT	432	False	NA	NA	False	NA	NA	NA	67464343	67515862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.28	chr5	+	2940	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	37	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.876638780208	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGGATTTGTTACGG	433	False	NA	3	True	AATAAA	-6	NA	67464344	67513117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499518_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.29	chr5	+	2986	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	128.680393217521	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	434	False	NA	7	True	AATAAA	-10	NA	67464345	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482019_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67510003_67510109_67511874
ES.26094.3	chr5	+	3032	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	105.920875345279	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTACGGTAGTTTTC	386	False	NA	11	True	AATAAA	-14	NA	67464297	67513125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485116_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.31	chr5	+	7348	16	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	-31	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	134.494345192982	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	584	False	NA	13	True	AATAAA	-16	NA	67464495	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482019_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67501110_67501664_67503041_67503468_67503577_67505262_67507255_67509994_67510109_67511874
ES.26094.32	chr5	+	168	1	Intergenic	novelGene_21691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAATAAATAACTA	8274	False	NA	NA	False	NA	NA	NA	67472185	67472353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_67472200_67472400
ES.26094.33	chr5	+	2811	17	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	106.548386162109	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTACGGTAGTTTTCA	9107	False	NA	12	True	AATAAA	-15	NA	67473018	67513126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503467_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.34	chr5	+	1790	1	Genic_Genomic	ENSMUSG00000029221.16	novel	NA	NA	NA	NA	1609	209	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGTCTCTTCGTTCCA	753	False	NA	NA	False	ATTAAA	-42	NA	67474677	67476467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_67474700_67476500
ES.26094.35	chr5	+	11434	2	NNC	ENSMUSG00000029221.16	novel	4838	9	NA	NA	9627	-154	intron_retention	TRUE	non_canonical	0	0	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGAAAACATCAGACTT	NA	False	NA	NA	False	NA	NA	NA	67499068	67510544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67508164_67508205
ES.26094.36	chr5	+	4068	6	NIC	ENSMUSG00000029221.16	novel	3272	15	NA	NA	10674	-2	intron_retention	FALSE	canonical	3	211	junction_1	23.2155120555201	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	NA	False	NA	13	True	AATAAA	-16	NA	67500115	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67501913_67502968_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.37	chr5	+	3628	7	NNC	ENSMUSG00000029221.16	novel	3272	15	NA	NA	10719	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	90.6704962426526	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	NA	False	NA	13	True	AATAAA	-16	NA	67500160	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511841
ES.26094.38	chr5	+	3085	5	NIC	ENSMUSG00000029221.16	novel	4838	9	NA	NA	11441	-181	intron_retention	FALSE	canonical	3	226	junction_4	21.5522620622523	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67500882	67510517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994
ES.26094.39	chr5	+	3332	6	NIC	ENSMUSG00000029221.16	novel	3272	15	NA	NA	12032	-8	intron_retention	FALSE	canonical	3	226	junction_4	19.281078807992	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	NA	False	NA	7	True	AATAAA	-10	NA	67501473	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.4	chr5	+	1045	3	FSM	ENSMUSG00000029221.16	ENSMUST00000159907.3	383	3	-227	-435	2	435	multi-exon	FALSE	canonical	3	16	junction_2	210.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTTTTTTTTTAATT	388	False	NA	NA	False	AATAAA	-12	NA	67464299	67476693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67464541_67473020_67473189_67476057
ES.26094.40	chr5	+	5183	2	NNC	ENSMUSG00000029221.16	novel	4838	9	NA	NA	15877	-154	intron_retention	TRUE	non_canonical	0	0	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAGAAAACATCAGACTT	NA	False	NA	NA	False	NA	NA	NA	67505318	67510544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67508148_67508190
ES.26094.41	chr5	+	3943	3	NNC	ENSMUSG00000029221.16	novel	5648	17	NA	NA	17934	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTACGGTAGTTTTCA	NA	False	NA	12	True	AATAAA	-15	NA	67507375	67513126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67508164_67508205_67510109_67511874
ES.26094.5	chr5	+	5584	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_7	142.977216468449	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACGGTAGTTTTCAA	388	False	NA	13	True	AATAAA	-16	NA	67464299	67513127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67488834_67489020_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67501913_67502919_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.6	chr5	+	2067	8	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.692730412909	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTTGTTACGGTAGT	389	False	NA	7	True	AATAAA	-10	NA	67464300	67513121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485830_67509994_67510109_67511874
ES.26094.7	chr5	+	7191	15	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	3	356	intron_retention	FALSE	canonical	3	226	junction_13	69.1100866851768	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATAGCCAGTAACAGT	389	False	NA	NA	False	AATAAA	-16	NA	67464300	67513485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.8	chr5	+	6850	15	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	4	16	intron_retention	FALSE	canonical	3	226	junction_13	69.1100866851768	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAGAAATGACACTTGG	390	False	NA	31	True	AATAAA	-34	NA	67464301	67513145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ES.26094.9	chr5	+	8512	14	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	-3	intron_retention	FALSE	canonical	3	226	junction_12	64.3119247779061	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTACGGTAGTTTTCA	395	False	NA	12	True	AATAAA	-15	NA	67464306	67513126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67505429_67507124_67507255_67509994_67510109_67511874
ES.26095.1	chr5	-	4038	2	Antisense	novelGene_ENSMUSG00000029221.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGCACTGGTTCTTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	67497344	67493094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_67495929_67496140
ES.26096.1	chr5	+	1086	1	Antisense	novelGene_ENSMUSG00000092060.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTGATCTATAGAGAA	NA	False	NA	NA	False	NA	NA	NA	67550640	67551726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_67550600_67551700
ES.26097.1	chr5	+	5142	2	Antisense	novelGene_ENSMUSG00000092060.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGGAGCCGTCCT	NA	False	NA	NA	False	NA	NA	NA	67577339	67582529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_67579255_67579302
ES.26098.1	chr5	-	8016	6	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	192	10	combination_of_known_junctions	TRUE	canonical	3	39	junction_5	22.3374125627835	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTCTTTTTGT	NA	False	NA	5	True	AATAAA	-30	NA	67585461	67549479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.12	chr5	-	7679	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.8144303062663	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585100	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67584828_67585040
ES.26098.13	chr5	-	7500	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.7189025587293	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585049	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584709_67584978
ES.26098.14	chr5	-	7803	5	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	222	-2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	36.071976657788	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	-8	True	AATAAA	-17	NA	67585431	67549492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67555794_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.15	chr5	-	7589	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	58	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	35.7189025587293	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTGACTTGATTTT	NA	False	NA	-8	True	AATAAA	-17	NA	67585084	67549492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584819_67585032
ES.26098.16	chr5	-	7567	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.8144303062663	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTTTGACTTGATTT	NA	False	NA	-9	True	AATAAA	-16	NA	67585100	67549493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67584743_67585064
ES.26098.17	chr5	-	7684	7	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	191	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.0587727318528	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTTTGACTTGATTT	NA	False	NA	-9	True	AATAAA	-16	NA	67585462	67549493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584743_67585061_67585136_67585312
ES.26098.19	chr5	-	7418	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	192	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.7189025587293	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTTTGACTTGATT	NA	False	NA	-10	True	AATAAA	-15	NA	67585461	67549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584627_67585386
ES.26098.2	chr5	-	7575	7	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	191	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.0587727318528	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585462	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584634_67585064_67585136_67585312
ES.26098.20	chr5	-	7766	7	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	182	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.2705880232945	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTTTGACTTGATT	NA	False	NA	-10	True	AATAAA	-15	NA	67585471	67549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67584749_67585064_67585136_67585312
ES.26098.21	chr5	-	6148	6	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	192	-1857	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	22.3374125627835	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGGGAAATGTCACTTAA	NA	False	NA	NA	False	GATAAA	-19	NA	67585461	67551347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.22	chr5	-	3123	6	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	191	-4883	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	22.3374125627835	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTTTGTGGAACCAA	NA	False	NA	NA	False	ATTAAA	-15	NA	67585462	67554373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.23	chr5	-	2213	1	Intergenic	novelGene_21692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGACAGGCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	67565337	67563124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67563100_67565300
ES.26098.3	chr5	-	8066	6	FSM	ENSMUSG00000092060.5	ENSMUST00000201972.2	8268	6	202	0	202	0	multi-exon	FALSE	canonical	3	28	junction_1	28.5839115587773	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585451	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.4	chr5	-	9673	5	NIC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	205	0	intron_retention	FALSE	canonical	3	39	junction_4	23.0488611432322	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585448	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67557645_67562773_67562863_67574798_67575366_67584408_67585136_67585312
ES.26098.6	chr5	-	7919	7	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.0587727318528	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585453	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584875_67584952_67585136_67585312
ES.26098.7	chr5	-	7703	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	42	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	35.7189025587293	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585100	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557474_67557645_67562773_67562863_67574798_67575366_67584408_67584620_67584737
ES.26098.8	chr5	-	7611	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	192	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.8144303062663	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585461	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67584745_67585386
ES.26098.9	chr5	-	7450	6	NNC	ENSMUSG00000092060.5	novel	8268	6	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.8144303062663	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGACTTGATTTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	67585432	67549490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584408_67584539_67585312
ES.26099.1	chr5	-	282	1	Intergenic	novelGene_21693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTGCCTAGCTCTA	NA	False	NA	NA	False	AATAAA	-9	NA	67591840	67591558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67591600_67591800
ES.26099.2	chr5	-	166	1	Intergenic	novelGene_21694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAATTTATTAA	NA	False	NA	NA	False	NA	NA	NA	67591839	67591673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67591700_67591800
ES.261.1	chr1	-	6989	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCAGGCTGAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	36034841	36027852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36027900_36034800
ES.2610.1	chr10	+	2649	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-70	949	-36	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245723	39440419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.10	chr10	+	3661	15	NNC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	47.1887763376515	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAAATTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	39245762	39441366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39343904_39344018_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.11	chr10	+	2709	15	NNC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.5905699672904	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39245767	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39343904_39344018_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.12	chr10	+	3114	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-21	435	13	-435	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGGTCTAAACCCATA	NA	False	NA	NA	False	AATAAA	-15	NA	39245772	39440933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.13	chr10	+	3509	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.7478016890597	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245781	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.14	chr10	+	3362	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.424874303761	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAAATTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	39245792	39441366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.16	chr10	+	2195	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	331	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.7478016890597	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAATGATCAGGACAG	NA	False	NA	NA	False	AATAAA	-19	NA	39246129	39440411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.17	chr10	+	157	1	Intergenic	novelGene_1978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	39308019	39308176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39308000_39308200
ES.2610.18	chr10	+	2495	12	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-3547	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.0814944661239	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39327253	39440419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39327768_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.19	chr10	+	3558	13	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-3496	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.7478016890597	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39327304	39441368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39327768_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.2	chr10	+	3605	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-68	-9	-34	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245725	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.20	chr10	+	4515	13	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-3486	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5104520664196	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39327314	39441368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39327768_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39404938_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.21	chr10	+	2488	13	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-429	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	42.811278368621	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39330371	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39330732_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.22	chr10	+	2400	13	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-332	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	34.2623659752537	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39330468	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39330732_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.23	chr10	+	2266	12	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	859	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.2365962680121	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39331769	39440419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39331960_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.24	chr10	+	273	1	Intergenic	novelGene_1981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8654	False	NA	NA	False	NA	NA	NA	39378593	39378866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39378600_39378900
ES.2610.25	chr10	+	2258	12	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-8264	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	44.7111944493872	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	9531	False	NA	NA	False	AATAAA	-18	NA	39379470	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39379671_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.26	chr10	+	2131	12	NNC	ENSMUSG00000019843.15	novel	1910	10	NA	NA	-8128	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	35.7257691101591	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	9667	False	NA	NA	False	AATAAA	-18	NA	39379606	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39379671_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.27	chr10	+	2621	9	NNC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-10254	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	41.0205741061726	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39399011	39441368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39399062_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.28	chr10	+	2592	8	ISM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	155591	-9	-7881	0	3prime_fragment	FALSE	canonical	3	82	junction_3	20.6456992606011	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39401384	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.29	chr10	+	5694	5	ISM	ENSMUSG00000019843.15	ENSMUST00000136659.2	1910	10	15786	-1	-5745	0	3prime_fragment	FALSE	canonical	3	107	junction_1	13.6083614002568	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39403520	39440419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.3	chr10	+	3515	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245745	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.30	chr10	+	3675	1	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-4025	17251	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-6	NA	39405240	39408915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39405200_39408900
ES.2610.31	chr10	+	2318	4	ISM	ENSMUSG00000019843.15	ENSMUST00000136659.2	1910	10	21549	-950	18	0	3prime_fragment	FALSE	canonical	3	116	junction_2	10.7082522694727	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39409283	39441368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.32	chr10	+	2668	1	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	29444	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39438709	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39438700_39441400
ES.2610.4	chr10	+	2550	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGATCAGGACAGGT	NA	False	NA	NA	False	AATAAA	-21	NA	39245746	39440413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.5	chr10	+	2562	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	43.1682753882988	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39245752	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.6	chr10	+	2611	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-7	958	-7	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245752	39440419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.7	chr10	+	3569	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	-7	0	-7	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245752	39441377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.8	chr10	+	2438	13	NIC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	33.424874303761	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39245760	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.2610.9	chr10	+	2707	15	NNC	ENSMUSG00000019843.15	novel	3562	14	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	47.1887763376515	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAATGATCAGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	39245760	39440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39246187_39271000_39271041_39331061_39331132_39343904_39344018_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ES.26100.1	chr5	+	215	1	Intergenic	novelGene_21695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	1437	False	NA	NA	False	NA	NA	NA	67614650	67614865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_67614600_67614900
ES.26101.1	chr5	+	859	3	NNC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	-6	13110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATTTA	8020	False	NA	NA	False	NA	NA	NA	67621233	67648085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67646778_67646895_67647470
ES.26101.10	chr5	+	3988	3	ISM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	27	248	21	-248	intron_retention	FALSE	canonical	3	7	junction_2	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAACTGTAATTTTGC	8053	False	NA	NA	False	NA	NA	NA	67621266	67627926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67621362_67623669_67623772_67624135
ES.26101.11	chr5	+	2359	5	FSM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	28	377	22	-377	multi-exon	FALSE	canonical	3	7	junction_2	4.76969600708473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGGACTTGGTTAAAAA	8054	False	NA	NA	False	NA	NA	NA	67621267	67627797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991
ES.26101.12	chr5	+	941	4	NNC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	22	-2466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.84573486395988	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCTTGAGTTAAATGT	8054	False	NA	NA	False	NA	NA	NA	67621267	67625708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67623669_67623772_67624135_67624391_67625218
ES.26101.13	chr5	+	3276	3	NIC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	22	-2	intron_retention	FALSE	canonical	1	2	junction_1	6.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGACTTTTTCTTATT	8054	False	NA	NA	False	NA	NA	NA	67621267	67628172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67621362_67624135_67624364_67625218
ES.26101.14	chr5	+	3532	3	ISM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	30	701	24	-701	intron_retention	FALSE	canonical	3	7	junction_2	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCTTTCTTGCGTCAA	8056	False	NA	NA	False	NA	NA	NA	67621269	67627473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_67621362_67623669_67623772_67624135
ES.26101.15	chr5	+	2665	5	FSM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	31	68	25	-68	multi-exon	FALSE	canonical	3	7	junction_2	4.76969600708473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAAAGGCTAATAGCTT	8057	False	NA	NA	False	AAGAAA	-36	NA	67621270	67628106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991
ES.26101.16	chr5	+	3468	1	NIC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	3461	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTTTTTCTTATTAT	NA	False	NA	NA	False	NA	NA	NA	67624706	67628174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67624700_67628200
ES.26101.17	chr5	+	4885	5	NNC	ENSMUSG00000107385.4	novel	2020	7	NA	NA	7084	13667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.44948974278318	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	67628329	67648642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67631405_67634249_67634626_67635222_67635369_67646778_67646895_67647470
ES.26101.2	chr5	+	2630	4	NIC	ENSMUSG00000107385.4	novel	2764	5	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.84573486395988	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGGACTTTTTCTTA	8027	False	NA	NA	False	NA	NA	NA	67621240	67628170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_67621362_67623669_67623772_67624135_67624364_67625991
ES.26101.3	chr5	+	2282	8	NNC	ENSMUSG00000107385.4	novel	2020	7	NA	NA	0	13110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.79232426648951	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATTTA	8029	False	NA	NA	False	NA	NA	NA	67621242	67648085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67623669_67623772_67624135_67624364_67630824_67631405_67634249_67634626_67635222_67635369_67646778_67646895_67647470
ES.26101.4	chr5	+	2512	5	FSM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	3	249	0	-249	multi-exon	TRUE	canonical	3	7	junction_2	4.76969600708473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTAACTGTAATTTTG	8029	False	NA	NA	False	NA	NA	NA	67621242	67627925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991
ES.26101.5	chr5	+	1781	5	NNC	ENSMUSG00000107385.4	novel	2020	7	NA	NA	1	-86	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.17635004720366	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAATTCACTTGCAT	8033	False	NA	NA	False	NA	NA	NA	67621246	67634889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67623669_67623888_67624135_67624364_67630824_67631405_67634249
ES.26101.6	chr5	+	2049	5	FSM	ENSMUSG00000107385.4	ENSMUST00000201973.4	2764	5	14	701	8	-701	multi-exon	FALSE	canonical	3	7	junction_2	4.76969600708473	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCTTTCTTGCGTCAA	8040	False	NA	NA	False	NA	NA	NA	67621253	67627473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991
ES.26101.7	chr5	+	3387	10	NNC	ENSMUSG00000107385.4	novel	2020	7	NA	NA	13	31799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.71115434484284	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTCTAGTTCACAGAAT	8045	False	NA	NA	False	AATAAA	-12	NA	67621258	67666774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67623669_67623772_67624135_67624364_67630824_67631405_67634249_67634626_67635222_67635369_67646778_67646895_67647470_67647639_67650701_67650794_67665298
ES.26101.8	chr5	+	3883	9	NNC	ENSMUSG00000107385.4	novel	1714	7	NA	NA	18	3820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.30476010645925	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCATCCTGCATAGT	8050	False	NA	NA	False	ATTAAA	-16	NA	67621263	67638795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67623669_67623772_67624135_67624364_67625218_67625348_67625991_67626159_67630396_67631405_67634249_67634626_67635222_67635369_67637166
ES.26101.9	chr5	+	6415	7	NNC	ENSMUSG00000107385.4	novel	1714	7	NA	NA	21	-108	intron_retention	FALSE	canonical	0	0	junction_1	5.65685424949238	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACGCCGATTGCCCAT	8053	False	NA	NA	False	TTTAAA	-39	NA	67621266	67634533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_67621362_67622726_67622898_67623669_67623772_67624142_67624364_67625218_67625348_67625991_67631405_67634249
ES.26102.1	chr5	-	3440	1	Intergenic	novelGene_21696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	67639256	67635816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67635800_67639300
ES.26102.2	chr5	-	3210	3	Intergenic	novelGene_21697	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGAGCATGGCAGTGC	NA	False	NA	NA	False	NA	NA	NA	67639256	67635955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67636566_67636600_67637608_67637663
ES.26102.3	chr5	-	3104	3	Intergenic	novelGene_21698	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	67639256	67635982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67636566_67636600_67637606_67637740
ES.26103.1	chr5	-	177	1	Intergenic	novelGene_21699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	67663308	67663131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67663100_67663300
ES.26104.1	chr5	+	160	1	Intergenic	novelGene_21700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATTAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	67685542	67685702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_67685500_67685700
ES.26105.1	chr5	+	653	1	Intergenic	novelGene_21703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCATCTTTACCTTTGC	NA	False	NA	NA	False	NA	NA	NA	67911705	67912358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_67911700_67912400
ES.26106.1	chr5	+	2132	2	Antisense	novelGene_ENSMUSG00000037685.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	67923220	67925444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_67923750_67923841
ES.26107.1	chr5	-	5092	1	Genic_Genomic	ENSMUSG00000037685.16	novel	NA	NA	NA	NA	39938	3135	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTTAACAATTGGTCT	6778	False	NA	NA	False	AATACA	-4	NA	67777439	67772347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_67772300_67777400
ES.26107.10	chr5	-	4940	8	NNC	ENSMUSG00000037685.16	novel	762	9	NA	NA	8738	-1	intron_retention	FALSE	canonical	0	0	junction_6	16.5788160873189	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATACTTTGCTGTGTTT	7232	False	NA	-6	True	AATAAA	-17	NA	67808639	67776504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67806424_67806629_67807877
ES.26107.12	chr5	-	4366	19	NNC	ENSMUSG00000037685.16	novel	5373	34	NA	NA	30677	-1	intron_retention	FALSE	canonical	0	0	junction_1	11.2694276695846	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATACTTTGCTGTGTTT	NA	False	NA	-6	True	AATAAA	-17	NA	67895783	67776504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67776670_67777541_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755
ES.26107.13	chr5	-	5368	8	ISM	ENSMUSG00000037685.16	ENSMUST00000149501.2	762	9	2795	-3516	2795	-3	3prime_fragment	FALSE	canonical	3	27	junction_2	7.01019665507731	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTATACTTTGCTGTGT	1289	False	NA	-8	True	AATAAA	-15	NA	67814582	67776506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248
ES.26107.14	chr5	-	6902	34	NIC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_13	13.4726195827155	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTATACTTTGCTGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	68004774	67776506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.15	chr5	-	4550	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	3580	0	960	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGGCTACGTCTTCAG	NA	False	NA	NA	False	TTTAAA	-27	NA	68004774	67779062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.16	chr5	-	4398	36	NNC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-1	777	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	13.1308640933007	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTTTCTGTCGTTTG	NA	False	NA	NA	False	ACTAAA	-29	NA	68004775	67779245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938435_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.17	chr5	-	4364	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-62	3767	-1	773	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAACTGCTTTTCTGTCG	NA	False	NA	NA	False	ACTAAA	-25	NA	68004775	67779249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.18	chr5	-	4377	37	NNC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-1	763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.8301858916282	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGGCCTTACAACTGC	NA	False	NA	NA	False	ACTAAA	-15	NA	68004775	67779259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962354_67962378_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.19	chr5	-	3755	26	ISM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	48221	0	15781	5prime_fragment	FALSE	canonical	3	35	junction_4	11.0079244183452	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATCTGATGATGCA	NA	False	NA	NA	False	ATTAAA	-2	NA	68004774	67823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.2	chr5	-	8161	37	FSM	ENSMUSG00000037685.16	ENSMUST00000072971.13	7154	37	19	-1026	17	5	multi-exon	TRUE	canonical	0	0	junction_22	14.894769775551	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGAAGTTTTGATTGCT	NA	False	NA	NA	False	AATAAA	-28	NA	68004755	67775477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67913992_67914038_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.20	chr5	-	3672	20	NNC	ENSMUSG00000037685.16	novel	8069	36	NA	NA	-3809	15781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	10.6892650735041	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAATCTGATGATGCA	NA	False	NA	NA	False	ATTAAA	-2	NA	67937911	67823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67937249
ES.26107.21	chr5	-	3356	25	NNC	ENSMUSG00000037685.16	novel	8069	36	NA	NA	561	15726	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	12.4832526699664	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTCAACCCACTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	67972012	67823758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970520_67971956
ES.26107.22	chr5	-	1606	1	Intergenic	novelGene_21701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAGAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	67836636	67835030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67835000_67836600
ES.26107.23	chr5	-	1861	1	Intergenic	novelGene_21702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAGAAGAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	67856847	67854986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67855000_67856800
ES.26107.24	chr5	-	3473	18	ISM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-61	125795	0	22700	5prime_fragment	FALSE	canonical	3	36	junction_8	11.382314941417	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAAAGTCTGGTCTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	68004774	67901277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.25	chr5	-	3396	17	NIC	ENSMUSG00000037685.16	novel	8178	37	NA	NA	-1	22696	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	16.0078105935821	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAGCAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	68004775	67901281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.26	chr5	-	176	1	Intergenic	novelGene_21704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGATTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	67914770	67914594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67914600_67914800
ES.26107.27	chr5	-	194	1	Intergenic	novelGene_21705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTACCTTTTCTTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	67918885	67918691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_67918700_67918900
ES.26107.28	chr5	-	871	7	FSM	ENSMUSG00000037685.16	ENSMUST00000113652.8	854	7	-23	6	-20	-6	multi-exon	FALSE	canonical	3	53	junction_2	8.34166250416147	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTCATGATTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	68004797	67938227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.29	chr5	-	1020	2	NNC	ENSMUSG00000037685.16	novel	8069	36	NA	NA	0	-34081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGGAAACGGTATAC	NA	False	NA	NA	False	AATAAA	-21	NA	68004777	68003595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_68004343_68004504
ES.26107.3	chr5	-	8136	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-63	-4	1	4	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTTTTGATTGC	NA	False	NA	NA	False	AATAAA	-27	NA	68004776	67775478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.4	chr5	-	7898	32	NNC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_12	15.4025417851837	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGCTGAAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	68004774	67775481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825049_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.5	chr5	-	7081	35	NNC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-18	1	intron_retention	FALSE	canonical	0	0	junction_4	14.8373243467826	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTTTGCTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-19	NA	68004795	67776502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788915_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.6	chr5	-	7147	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-99	1021	-35	0	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004812	67776503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.7	chr5	-	7036	35	NIC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-1	0	intron_retention	FALSE	canonical	1	4	junction_29	12.9002025144373	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004775	67776503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.8	chr5	-	6974	34	NIC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_28	13.3936651555636	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004783	67776503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26107.9	chr5	-	7210	37	NNC	ENSMUSG00000037685.16	novel	7154	37	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_30	14.5967134386435	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATACTTTGCTGTGTTT	NA	False	NA	-6	True	AATAAA	-17	NA	68004774	67776504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938151_67938254_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ES.26108.1	chr5	-	192	1	Intergenic	novelGene_21706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATTTACC	NA	False	NA	NA	False	NA	NA	NA	68009597	68009405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_68009400_68009600
ES.26109.1	chr5	-	157	1	Intergenic	novelGene_21707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATATAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69018126	69017969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_69018000_69018100
ES.2611.1	chr10	-	141	1	Intergenic	novelGene_1979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	6600	False	NA	NA	False	NA	NA	NA	39362977	39362836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39362800_39363000
ES.26110.1	chr5	-	181	1	Intergenic	novelGene_21708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATG	NA	False	NA	NA	False	NA	NA	NA	69504835	69504654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_69504700_69504800
ES.26111.1	chr5	+	2105	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-39	1367	-1	6	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCCTTCTCATT	NA	False	NA	9	True	AATAAA	-20	NA	69714264	69729080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.10	chr5	+	3442	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-1	195	intron_retention	FALSE	canonical	3	69	junction_8	27.4765354439019	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGTATGTCTGATAT	NA	False	NA	NA	False	NA	NA	NA	69714294	69729313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.11	chr5	+	9000	13	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-1	-1331	intron_retention	FALSE	canonical	3	10	junction_7	41.1368819376913	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	2	True	ATTAAA	-17	NA	69714294	69731985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.12	chr5	+	4990	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-6	-1551	2	-1318	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714297	69731998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.13	chr5	+	5984	15	FSM	ENSMUSG00000029208.17	ENSMUST00000154728.8	3091	15	32	-2925	2	-1318	multi-exon	FALSE	canonical	3	43	junction_8	33.0772133169698	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714297	69731998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.14	chr5	+	5967	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	2	-197	intron_retention	FALSE	canonical	2	15	junction_5	45.3514669614507	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCATGTTGTCATTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	69714297	69733119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717778_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.16	chr5	+	1924	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714298	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.17	chr5	+	5500	13	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	120	junction_7	15.2212844398888	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714298	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.18	chr5	+	6607	14	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	-1317	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGTATGTAGTCTGTA	NA	False	NA	16	True	ATTAAA	-31	NA	69714298	69731999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.19	chr5	+	3320	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.0347430303618	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	AATACA	-16	NA	69714303	69730447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.2	chr5	+	2948	15	NNC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	8	-2	intron_retention	FALSE	canonical	2	6	junction_8	58.868757522517	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGGTGTTCTCTGTTC	NA	False	NA	0	True	AATAAA	-11	NA	69714273	69729071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717778_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.20	chr5	+	3176	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.1788335267677	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	AATACA	-16	NA	69714307	69730447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.21	chr5	+	5853	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	10	-1318	intron_retention	FALSE	canonical	3	43	junction_7	34.2586947104718	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714313	69731998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.22	chr5	+	1780	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	50.22969462601	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714313	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.23	chr5	+	3947	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	11	-525	11	525	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTGAGTTAAATACACT	NA	False	NA	NA	False	AATAAA	-19	NA	69714314	69730972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.25	chr5	+	3282	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	AATACA	-16	NA	69714314	69730447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.26	chr5	+	6272	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	13	-2852	13	-17	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAGAAAAAAGCATA	NA	False	NA	NA	False	ATTAAA	-5	NA	69714316	69733299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.27	chr5	+	3040	15	FSM	ENSMUSG00000029208.17	ENSMUST00000154728.8	3091	15	51	0	13	0	multi-exon	FALSE	canonical	3	43	junction_8	33.0772133169698	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714316	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.28	chr5	+	4133	14	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	13	425	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCATGAGGGGCAGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	69714316	69729543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.29	chr5	+	3804	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	13	0	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714316	69729074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.3	chr5	+	6499	14	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	12	-1317	intron_retention	FALSE	canonical	2	6	junction_8	53.2788799924927	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGTATGTAGTCTGTA	NA	False	NA	16	True	ATTAAA	-31	NA	69714277	69731999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.30	chr5	+	4701	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	13	-1331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.8288654928812	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	2	True	ATTAAA	-17	NA	69714316	69731985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717778_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.31	chr5	+	4843	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-13	-1332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.0347430303618	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGTTTTGACTGCG	NA	False	NA	1	True	ATTAAA	-16	NA	69714317	69731984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.32	chr5	+	6275	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_14	42.5396414388979	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAATTCTAGTTGTAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	69714318	69733314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725833_69726573_69726692_69728103_69728141_69728926
ES.26111.33	chr5	+	4071	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	17	-655	-10	655	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATATCTTCAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	69714320	69731102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.34	chr5	+	1664	15	NNC	ENSMUSG00000029208.17	novel	1769	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.9885424058355	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714321	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.35	chr5	+	3817	14	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	-9	0	intron_retention	FALSE	canonical	3	43	junction_8	34.2370780703158	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714321	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.36	chr5	+	4373	15	FSM	ENSMUSG00000029208.17	ENSMUST00000154728.8	3091	15	59	-1341	-6	-33	multi-exon	FALSE	canonical	3	43	junction_8	33.0772133169698	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAACTGAAAAATACATT	NA	False	NA	NA	False	AATAAA	-21	NA	69714324	69730414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.39	chr5	+	3522	14	NNC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_8	53.2788799924927	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714328	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.4	chr5	+	6575	12	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	13	-1331	intron_retention	FALSE	canonical	0	0	junction_3	58.932094274149	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	2	True	ATTAAA	-17	NA	69714278	69731985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716892_69716971_69717774_69717859_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69726692_69728103_69728141_69728926
ES.26111.41	chr5	+	4803	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-2	-1334	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	33.0987747339518	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTATTGTTTTGACTG	NA	False	NA	-1	True	ATTAAA	-14	NA	69714328	69731982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.42	chr5	+	1828	16	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	40.8587811859336	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGGTGTTCTCTGTTC	NA	False	NA	0	True	AATAAA	-11	NA	69714328	69729071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.43	chr5	+	1876	13	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-2	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.8263677246992	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	69714328	69724195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719160_69719259_69719335_69720425_69720566_69721866_69721991_69722772_69722906_69723703
ES.26111.44	chr5	+	3768	15	NNC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_8	55.4720006592773	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714328	69729074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721370_69721487_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.45	chr5	+	3667	15	FSM	ENSMUSG00000029208.17	ENSMUST00000031113.13	1769	15	-2	-1896	-2	523	multi-exon	FALSE	canonical	3	7	junction_8	41.9435967237247	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGCTGAGTTAAATACA	NA	False	NA	NA	False	AATAAA	-17	NA	69714328	69730970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.46	chr5	+	4887	14	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-1	-8	intron_retention	FALSE	canonical	2	6	junction_8	53.2788799924927	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGTCTTGATACTG	NA	False	NA	NA	False	AATACA	-8	NA	69714329	69730439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.48	chr5	+	4186	15	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	3	-82	intron_retention	FALSE	canonical	2	6	junction_8	51.7355915069252	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATACCTAAATGACACA	NA	False	NA	NA	False	AATAAA	-17	NA	69714333	69730365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.49	chr5	+	4655	14	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	4	-1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	45.364271842093	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCGTGTATGTAGTCTG	NA	False	NA	14	True	ATTAAA	-29	NA	69714334	69731997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724567_69728926
ES.26111.5	chr5	+	3458	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	-25	0	13	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	AATACA	-16	NA	69714278	69730447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.50	chr5	+	4694	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	7	-1332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.258153076658	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTGTTTTGACTGCG	NA	False	NA	1	True	ATTAAA	-16	NA	69714337	69731984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.51	chr5	+	5192	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	14	-1333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.0347430303618	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTATTGTTTTGACTGC	NA	False	NA	0	True	ATTAAA	-15	NA	69714344	69731983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714756_69715510_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.52	chr5	+	2903	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	20	-4	intron_retention	FALSE	canonical	0	0	junction_15	54.4191959595958	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAAGTCTGAGATGCA	NA	False	NA	43	True	NA	NA	NA	69714350	69729114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69724834_69725738_69725841_69726571_69726692_69728103_69728139_69728926
ES.26111.53	chr5	+	4669	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	20	-1317	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	50.22969462601	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGTATGTAGTCTGTA	NA	False	NA	16	True	ATTAAA	-31	NA	69714350	69731999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.54	chr5	+	3638	15	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	26	3	intron_retention	FALSE	canonical	3	6	junction_8	51.4024239085422	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTCTCTGTTCCTTCTC	NA	False	NA	6	True	AATAAA	-17	NA	69714356	69729077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.55	chr5	+	4928	17	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	29	-1318	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	55.7095915776628	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTGTATGTAGTCTGT	NA	False	NA	15	True	ATTAAA	-30	NA	69714359	69731998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69724693_69724834_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.6	chr5	+	1700	16	NNC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1323938294401	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTTCTCTGTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	69714280	69729073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_69714396_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69719259_69719335_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.7	chr5	+	3695	14	NIC	ENSMUSG00000029208.17	novel	3091	15	NA	NA	-10	0	intron_retention	FALSE	canonical	3	43	junction_8	32.5779901741495	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714285	69729074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.8	chr5	+	7096	14	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	105	junction_10	18.8930343132629	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGTCTTGATACTG	NA	False	NA	NA	False	AATACA	-8	NA	69714292	69730439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69721991_69722772_69722906_69723703_69723848_69724470_69725841_69726571_69726692_69728103_69728141_69728926
ES.26111.9	chr5	+	6739	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	-3	-1331	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATTGTTTTGACTGCGT	NA	False	NA	2	True	ATTAAA	-17	NA	69714292	69731985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
ES.26112.1	chr5	-	6830	4	NIC	ENSMUSG00000029209.16	novel	1894	7	NA	NA	4275	0	intron_retention	TRUE	canonical	3	104	junction_3	14.7271480229163	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-45	NA	69743860	69732343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_69733297_69735320_69735496_69736850_69742500_69743807
ES.26112.2	chr5	-	1887	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	3	4	3	-4	multi-exon	FALSE	canonical	3	104	junction_4	11.5998084275369	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATCTCATTTTC	NA	False	NA	NA	False	AATAAA	-41	NA	69749680	69732347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ES.26112.3	chr5	-	4439	7	NIC	ENSMUSG00000029209.16	novel	1894	7	NA	NA	-2	-7	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	45.5109876842944	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATAATTATCTCATT	NA	False	NA	NA	False	AATAAA	-38	NA	69749634	69732350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_69733297_69735320_69735496_69736850_69739637_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ES.26112.5	chr5	-	1793	7	NNC	ENSMUSG00000029209.16	novel	1011	7	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.5109876842944	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATAATTATCTCATT	NA	False	NA	NA	False	AATAAA	-38	NA	69749591	69732350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_69733297_69735320_69735496_69736850_69737030_69742312_69742500_69743807_69743910_69747003_69747167_69749550
ES.26112.6	chr5	-	1974	9	NNC	ENSMUSG00000029209.16	novel	1011	7	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.049032547617	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATAATTATCTCATT	NA	False	NA	NA	False	AATAAA	-38	NA	69749644	69732350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_69733297_69735320_69735496_69736850_69737030_69739572_69739637_69742316_69742500_69743807_69743910_69746680_69746749_69747003_69747167_69749550
ES.26112.7	chr5	-	3163	7	FSM	ENSMUSG00000029209.16	ENSMUST00000120789.8	1594	7	4	-1573	0	1	multi-exon	TRUE	canonical	0	0	junction_1	42.414620120897	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGATTATTGTTAAA	NA	False	NA	NA	False	AATAAA	-16	NA	69749632	69732511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_69734785_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ES.26112.8	chr5	-	2695	1	NIC	ENSMUSG00000029209.16	novel	1202	8	NA	NA	12923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTCTGATTATT	NA	False	NA	NA	False	AATAAA	-10	NA	69735212	69732517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_69732500_69735200
ES.26113.1	chr5	+	6455	1	Intergenic	novelGene_21709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGAAATAAGGACTAAAG	NA	False	NA	NA	False	NA	NA	NA	70919497	70925952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_70919500_70926000
ES.26114.1	chr5	-	3315	2	NNC	ENSMUSG00000001260.11	novel	4771	9	NA	NA	79849	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATCATGTTCTCTAC	NA	False	NA	NA	False	AATAAA	-7	NA	70919698	70909176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_70911635_70918841
ES.26115.1	chr5	+	2571	1	Intergenic	novelGene_21710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCTCATGACTCCTTAG	NA	False	NA	NA	False	NA	NA	NA	71637647	71640218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_71637600_71640200
ES.26116.1	chr5	-	585	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	-49	6	-49	-6	multi-exon	FALSE	canonical	3	51	junction_2	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACTAATAAGTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	71705597	71600172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_71600613_71660793_71660857_71705515
ES.26116.2	chr5	-	1129	3	NNC	ENSMUSG00000049387.11	novel	542	3	NA	NA	21839	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACTAATAAGTTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	71683709	71600172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_71600613_71660793_71660857_71683083
ES.26117.1	chr5	-	3886	10	NNC	ENSMUSG00000029211.12	novel	4108	9	NA	NA	19	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.314269680527355	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATAATAAAATTATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	71815305	71727107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_71729567_71781197_71781458_71790888_71791042_71795474_71795619_71798170_71798254_71798405_71798627_71799601_71799670_71800254_71800395_71814513_71814633_71815066
ES.26118.1	chr5	+	4957	1	Antisense	novelGene_ENSMUSG00000029213.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTAAGACAAAACTGCCA	NA	False	NA	NA	False	NA	NA	NA	72317554	72322511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_72317600_72322500
ES.26119.1	chr5	-	3900	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	-6	1	-6	-1	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATAGACTCATGGGTAT	NA	False	NA	-5	True	NA	NA	NA	72325538	72313918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ES.26119.10	chr5	-	864	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	3	3028	3	273	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAACGTTTTATCAAGA	NA	False	NA	-16	True	ATTAAA	-17	NA	72325529	72316945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ES.26119.2	chr5	-	3982	6	NNC	ENSMUSG00000029213.12	novel	3360	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	165.277221661063	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCATAGACTCATGGGT	NA	False	NA	-7	True	NA	NA	NA	72325498	72313920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72323026_72323151_72325421
ES.26119.3	chr5	-	3156	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	34	705	1	-95	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCCCTAGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	72325498	72314622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ES.26119.4	chr5	-	1472	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	-10	2433	-10	3	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGCTTGATTTCAGT	NA	False	NA	-1	True	AATACA	-17	NA	72325542	72316350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ES.26119.5	chr5	-	4084	5	ISM	ENSMUSG00000029213.12	ENSMUST00000199767.5	3360	6	23	1825	15	1	intron_retention	FALSE	canonical	3	10	junction_4	172.354830219521	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTTGCTTGATTTCA	NA	False	NA	-3	True	AATACA	-15	NA	72325484	72316352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322097_72322198_72322693
ES.26119.6	chr5	-	5676	2	FSM	ENSMUSG00000029213.12	ENSMUST00000198951.2	1114	2	-4582	20	0	-20	multi-exon	FALSE	canonical	3	379	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACAAGCTGGTCGTCTC	NA	False	NA	-24	True	AATACA	-44	NA	72323063	72316373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72317237_72318250
ES.26119.7	chr5	-	1520	6	NNC	ENSMUSG00000029213.12	novel	3360	6	NA	NA	1	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.689501881907	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACAAGCTGGTCGT	NA	False	NA	-27	True	AATACA	-41	NA	72325498	72316376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72317235_72318250_72318407_72320064_72320218_72322693_72322850_72323026_72323147_72325421
ES.26119.9	chr5	-	1502	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	10	-30	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	141.390416931276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCTGAACAAATACAAGC	NA	False	NA	-34	True	AATACA	-34	NA	72325489	72316383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325305
ES.2612.1	chr10	-	6572	1	Intergenic	novelGene_1980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCGGTTGTCCGAGTGAA	NA	False	NA	NA	False	NA	NA	NA	39379306	39372734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39372700_39379300
ES.26120.1	chr5	+	5807	24	NNC	ENSMUSG00000046808.18	novel	2365	7	NA	NA	-1541	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	32.3605631772585	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTCCTGTAACTATTCT	NA	False	NA	29	True	AATAAA	-34	NA	72359130	72456123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72359232_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.10	chr5	+	5934	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.1562978093101	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCATTACTCCTGTA	NA	False	NA	21	True	AATAAA	-26	NA	72360672	72456115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454973_72455086
ES.26120.11	chr5	+	5708	22	NIC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	26.3269173273993	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTCACTGGAAACTGT	NA	False	NA	8	True	AATAAA	-13	NA	72360672	72456102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_72360907_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.12	chr5	+	5842	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	37.6074139012544	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCATTACTCCTGTA	NA	False	NA	21	True	AATAAA	-26	NA	72360672	72456115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403486_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424757_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455081
ES.26120.13	chr5	+	5933	23	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	1	-5	intron_retention	FALSE	canonical	1	2	junction_3	24.8696186919763	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTCATTACTCCTG	NA	False	NA	19	True	AATAAA	-24	NA	72360672	72456113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396553_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.15	chr5	+	3626	10	ISM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	2	41905	2	26395	5prime_fragment	FALSE	canonical	3	78	junction_3	9.32671723174814	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTGACTTTCACTCT	NA	False	NA	NA	False	TATAAA	-22	NA	72360673	72414213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253
ES.26120.16	chr5	+	5678	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_23	25.1562978093101	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72360675	72456104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72455554_72455909
ES.26120.17	chr5	+	6757	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	5	826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.1562978093101	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTATGTGAGTACACTG	NA	False	NA	NA	False	NA	NA	NA	72360676	72456944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.2	chr5	+	5813	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.4892304389925	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTCATTACTCCTG	NA	False	NA	19	True	AATAAA	-24	NA	72360645	72456113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360763_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.20	chr5	+	5845	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	31.1460368966379	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72360699	72456104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439496_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.21	chr5	+	5852	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.2912080480472	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72360700	72456104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434710_72436749_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.22	chr5	+	5631	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	31.1460368966379	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTACTCCTGTAACT	NA	False	NA	24	True	AATAAA	-29	NA	72360708	72456118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439496_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454778_72455112
ES.26120.23	chr5	+	5919	23	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	43	-8	intron_retention	FALSE	canonical	1	5	junction_7	24.7747288599219	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGATGTTCACTGGA	NA	False	NA	2	True	AATAAA	-7	NA	72360738	72456096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403523_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.25	chr5	+	5833	22	NIC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	55	0	intron_retention	FALSE	canonical	0	0	junction_17	26.0888939107722	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72360750	72456104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.26	chr5	+	5879	23	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	55	0	intron_retention	FALSE	canonical	2	4	junction_7	24.9518544665986	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72360750	72456105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403486_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.27	chr5	+	6460	22	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	157	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	26.2614622420948	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCATTACTCCTGT	NA	False	NA	20	True	AATAAA	-25	NA	72360852	72456114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403144_72403424_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.28	chr5	+	8383	21	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	24367	0	intron_retention	FALSE	non_canonical	0	0	junction_5	39.0415163639939	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72385062	72456105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72404057_72404097_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72436805_72437386_72437513_72439496_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.29	chr5	+	4886	17	ISM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	42760	14	-18555	0	3prime_fragment	FALSE	canonical	3	87	junction_5	13.8112273169331	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACTGGAAACTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	72403431	72456104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.3	chr5	+	6083	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	-26	-5	-26	5	multi-exon	FALSE	canonical	3	78	junction_3	13.360930461982	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTCCTGTAACTATTCT	NA	False	NA	29	True	AATAAA	-34	NA	72360645	72456123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.30	chr5	+	170	1	Intergenic	novelGene_21712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	72407918	72408088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72407900_72408100
ES.26120.31	chr5	+	2567	2	Intergenic	novelGene_21713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	72414557	72418008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72416620_72417503
ES.26120.32	chr5	+	4203	15	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-3686	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.8557036030914	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGGAAACTGTCATTA	NA	False	NA	13	True	AATAAA	-18	NA	72418300	72456107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72418456_72418821_72419038_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.33	chr5	+	3352	11	ISM	ENSMUSG00000046808.18	ENSMUST00000136350.8	3488	12	1402	16	1402	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	36.2581025427421	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTCACTGGAAACTGT	NA	False	NA	8	True	AATAAA	-13	NA	72423388	72456102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_72423512_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.34	chr5	+	3881	6	NNC	ENSMUSG00000046808.18	novel	2484	6	NA	NA	471	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	49.4635219126176	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72437860	72456105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.35	chr5	+	2218	4	ISM	ENSMUSG00000046808.18	ENSMUST00000146393.8	2484	6	8094	-7	8094	-6	3prime_fragment	FALSE	canonical	3	120	junction_1	0.471404520791032	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTGTCATTACTCCT	NA	False	NA	18	True	AATAAA	-23	NA	72445483	72456112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.4	chr5	+	5881	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	31.9816227949326	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTACTCCTGTAACT	NA	False	NA	24	True	AATAAA	-29	NA	72360645	72456118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403486_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.5	chr5	+	5970	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-26	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.1562978093101	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTAACTATTCTCTG	NA	False	NA	32	True	AATAAA	-37	NA	72360645	72456126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26120.6	chr5	+	6002	23	NIC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-10	2	intron_retention	FALSE	canonical	3	10	junction_18	23.9049426059076	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGGAAACTGTCATTA	NA	False	NA	13	True	AATAAA	-18	NA	72360661	72456107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439496_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ES.26120.8	chr5	+	6482	24	NNC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	32.4934194297582	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACTGGAAACTGTCAT	NA	False	NA	11	True	AATAAA	-16	NA	72360664	72456105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72404057_72404097_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455080
ES.26121.1	chr5	-	222	1	Intergenic	novelGene_21711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTTAAGCTGTTTGAA	NA	False	NA	NA	False	NA	NA	NA	72395978	72395756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_72395800_72396000
ES.26122.1	chr5	-	1973	1	Antisense	novelGene_ENSMUSG00000046808.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTATACCCTGCCCCG	NA	False	NA	NA	False	NA	NA	NA	72404234	72402261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_72402300_72404200
ES.26123.1	chr5	+	170	1	Intergenic	novelGene_21714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	72572760	72572930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72572800_72572900
ES.26124.1	chr5	+	123	1	Intergenic	novelGene_21715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	72601628	72601751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72601600_72601800
ES.26125.1	chr5	-	3717	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	-5	0	-5	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717032	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.11	chr5	-	5390	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	37.8087018275462	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72717055	72670646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72711791_72713689_72716356_72716612_72717001
ES.26125.12	chr5	-	4152	8	ISM	ENSMUSG00000072889.10	ENSMUST00000135318.8	3579	22	32499	0	-2487	0	3prime_fragment	FALSE	canonical	3	109	junction_5	12.9803619332578	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72684489	72670646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989
ES.26125.13	chr5	-	5872	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_14	45.143389547471	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72716991	72670646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696405_72696461_72696847_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72711791_72713689_72716356
ES.26125.17	chr5	-	3591	22	FSM	ENSMUSG00000072889.10	ENSMUST00000135318.8	3579	22	-12	0	-9	0	multi-exon	FALSE	canonical	1	1	junction_11	29.5548224211324	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72717000	72670646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.18	chr5	-	3663	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	28.0975279051408	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGTGATAAAGGATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72717017	72670646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675573_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.2	chr5	-	6517	15	NIC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	16851	0	intron_retention	FALSE	canonical	3	109	junction_3	10.1048079079784	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72699904	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_72671675_72673554_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834
ES.26125.20	chr5	-	3699	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.846845509826	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGTGATAAAGGATA	NA	False	NA	NA	False	ATTAAA	-12	NA	72717001	72670647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674351_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.24	chr5	-	3629	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	28.3862089667524	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCAAATTTGTGATAAA	NA	False	NA	NA	False	ATTAAA	-7	NA	72717023	72670652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72717001
ES.26125.25	chr5	-	3498	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	4	210	4	4	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCGAGCACAGGGCT	NA	False	NA	NA	False	NA	NA	NA	72717023	72670853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.27	chr5	-	3483	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	28.9606815247875	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTGCCGAGCACAGGG	NA	False	NA	NA	False	NA	NA	NA	72717018	72670855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716939
ES.26125.28	chr5	-	2387	5	FSM	ENSMUSG00000072889.10	ENSMUST00000146761.2	798	5	1	-1590	1	1588	multi-exon	FALSE	canonical	3	106	junction_4	15.8587515271537	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGAGGTATGGCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	72716990	72705976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.29	chr5	-	816	5	FSM	ENSMUSG00000072889.10	ENSMUST00000146761.2	798	5	-16	-2	-16	0	multi-exon	FALSE	canonical	3	106	junction_4	15.8587515271537	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTGTATTGTTGGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	72717007	72707564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.3	chr5	-	3688	22	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.6657112129257	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717012	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72685488_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.30	chr5	-	2465	3	ISM	ENSMUSG00000072889.10	ENSMUST00000146761.2	798	5	-43	4015	-7	1213	5prime_fragment	FALSE	canonical	3	106	junction_2	19.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCTTGTTATTCTTC	NA	False	NA	NA	False	NA	NA	NA	72717034	72711581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_72713689_72716356_72716612_72716931
ES.26125.5	chr5	-	4788	22	NIC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	6	0	intron_retention	FALSE	canonical	3	106	junction_21	11.8734827172458	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717021	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_72671675_72673554_72673609_72674368_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26125.6	chr5	-	3696	23	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	28.9606815247875	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717018	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716938
ES.26125.9	chr5	-	3716	22	NNC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.6657112129257	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717023	72670643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72685471_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ES.26126.1	chr5	+	1492	6	FSM	ENSMUSG00000067219.10	ENSMUST00000087212.8	4206	6	-18	2732	-18	723	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTCTGCAAAGCCTCC	2021	False	NA	NA	False	NA	NA	NA	72805119	72825689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_72805277_72816024_72816292_72818098_72818156_72820876_72820968_72824118_72824280_72824930
ES.26127.1	chr5	+	178	1	Intergenic	novelGene_21716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	72942657	72942835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72942700_72942800
ES.26128.1	chr5	+	195	1	Intergenic	novelGene_21717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTTGTTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	72964157	72964352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_72964200_72964400
ES.26129.1	chr5	-	2554	18	FSM	ENSMUSG00000029217.17	ENSMUST00000113594.8	2580	18	14	12	-1	-1	multi-exon	FALSE	canonical	0	0	junction_17	3.66315234751536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATCTCTTTAGCTGA	NA	False	NA	NA	False	NA	NA	NA	73025788	72913077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_73025736
ES.26129.2	chr5	-	2566	18	FSM	ENSMUSG00000029217.17	ENSMUST00000073843.13	2573	18	5	2	2	-2	multi-exon	FALSE	canonical	0	0	junction_10	3.37403068228235	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACGTTTATCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	73025784	72913082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73025736
ES.26129.3	chr5	-	2674	20	NNC	ENSMUSG00000029217.17	novel	2659	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	3.84534830686481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACGTTTATCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	73025788	72913082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73024927_73024966_73025736
ES.26129.4	chr5	-	4657	12	NIC	ENSMUSG00000029217.17	novel	2573	18	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_9	3.62953905048675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACGTTTATCTCTTT	NA	False	NA	NA	False	NA	NA	NA	73025786	72913083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_72913723_72914705_72914864_72914946_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72980798_72980985_72982386_72982474_73025736
ES.2613.1	chr10	+	3226	2	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	211	26434	211	-16885	5prime_fragment	FALSE	canonical	3	65	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACATGTCTAAAACCT	NA	False	NA	NA	False	AATAAA	-11	NA	39489140	39504869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39489343_39501845
ES.2613.10	chr10	+	2076	10	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	309	15889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.3917767957277	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTTCTTGCTTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	39489238	39547192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39543100_39543180_39546828
ES.2613.11	chr10	+	2099	11	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	309	19883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.2311960684055	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATGGTTTTAAAACAA	NA	False	NA	NA	False	AATAAA	-26	NA	39489238	39551186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39543100_39543180_39546828_39546943_39550913
ES.2613.12	chr10	+	3459	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	328	-920	328	920	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAGAAGAGCCTTAC	NA	False	NA	NA	False	AATATA	-10	NA	39489257	39532223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.13	chr10	+	1262	9	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	381	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.797727188869	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39489310	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39509687_39509758_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.14	chr10	+	4316	10	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	382	0	intron_retention	FALSE	canonical	0	0	junction_1	33.5397313681388	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39489311	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39497436_39497565_39501309_39501590_39501845_39502656_39510530_39510721_39515215_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.15	chr10	+	7470	2	Antisense	novelGene_ENSMUSG00000087177.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAAATCTGCAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	39492110	39499813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_39495130_39495362
ES.2613.16	chr10	+	2028	1	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	12609	-18188	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAAAAAAGAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	39501538	39503566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39501500_39503600
ES.2613.17	chr10	+	3931	8	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	12948	-1509	12948	1509	3prime_fragment	FALSE	canonical	3	53	junction_1	7.86882248795452	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATTTAAGTGCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	39501877	39532812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.18	chr10	+	1213	8	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-8837	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	32.8061716443596	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39508292	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39508350_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526973_39530378
ES.2613.19	chr10	+	1238	8	NNC	ENSMUSG00000019842.7	novel	768	3	NA	NA	-7520	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.8385884494727	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39509609	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39509688_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.2	chr10	+	3025	3	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	213	4770	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.5	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCCCTCCTCTTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	39489142	39536073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39501845_39502266_39533668
ES.2613.20	chr10	+	1532	7	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	21711	2	-6489	-2	3prime_fragment	FALSE	canonical	3	66	junction_3	3.76017139089283	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTCTTTCTTTTCTTTC	NA	False	NA	NA	False	TATAAA	-14	NA	39510640	39531301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.21	chr10	+	3877	1	Intergenic	novelGene_1982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAAAAACTTATGAAA	NA	False	NA	NA	False	TTTAAA	-40	NA	39510912	39514789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39510900_39514800
ES.2613.22	chr10	+	4663	5	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	-3698	0	intron_retention	FALSE	canonical	3	66	junction_1	3.63145976158349	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39513431	39530821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.23	chr10	+	2854	1	FSM	ENSMUSG00000111847.2	ENSMUST00000214635.2	1332	1	-1484	-38	-1484	38	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	3334	False	NA	NA	False	NA	NA	NA	39536600	39539454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39536600_39539500
ES.2613.3	chr10	+	2245	10	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	266	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.0333148353624	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39489195	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39497436_39497565_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.4	chr10	+	2111	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	273	483	273	1	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTTATCTCAGTG	NA	False	NA	4	True	AATAAA	-17	NA	39489202	39530820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.5	chr10	+	2837	3	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	274	18885	274	-9336	5prime_fragment	FALSE	canonical	3	53	junction_2	6	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGGTTTTGTGATTTT	NA	False	NA	NA	False	AATAAA	-25	NA	39489203	39512418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39489343_39501845_39502656_39510530
ES.2613.6	chr10	+	5923	9	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.8298001460356	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39489221	39530821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39525608_39525717_39526977_39530378
ES.2613.7	chr10	+	3992	8	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	298	0	intron_retention	FALSE	canonical	3	53	junction_2	7.89212989539036	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGTTTATCTCAGT	NA	False	NA	3	True	AATAAA	-16	NA	39489227	39530819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ES.2613.8	chr10	+	3225	3	NNC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	298	-16909	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATATAAATAAAAGTGGA	NA	False	NA	NA	False	AATAGA	-37	NA	39489227	39504845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39489343_39499168_39499279_39501845
ES.2613.9	chr10	+	1984	3	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	304	19708	304	-10159	5prime_fragment	FALSE	canonical	3	53	junction_2	6	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	39489233	39511595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39489343_39501845_39502656_39510530
ES.26130.1	chr5	+	2568	1	Intergenic	novelGene_21718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGAAAACTTGAACTAAA	5190	False	NA	NA	False	NA	NA	NA	73027188	73029756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73027200_73029800
ES.26131.1	chr5	+	1582	1	Intergenic	novelGene_21719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	73039437	73041019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73039400_73041000
ES.26132.1	chr5	-	193	1	Intergenic	novelGene_21720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACATTAATTCAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	73043890	73043697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73043700_73043900
ES.26133.1	chr5	-	174	1	Intergenic	novelGene_21721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACTAAAACT	NA	False	NA	NA	False	NA	NA	NA	73061166	73060992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73061000_73061200
ES.26134.1	chr5	+	178	1	Intergenic	novelGene_21722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAAGAGCTGGAT	NA	False	NA	NA	False	NA	NA	NA	73064333	73064511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73064300_73064500
ES.26135.1	chr5	-	221	1	Intergenic	novelGene_21723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACCTCCCAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	73067190	73066969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73067000_73067200
ES.26136.1	chr5	+	4462	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-50	421	-50	-403	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGAATCATTTTTCTA	NA	False	NA	31	True	AATAAA	-44	NA	73071596	73135751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.10	chr5	+	4130	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	0	0	junction_8	82.5435491119688	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATTTATCTTCCAAGT	NA	False	NA	10	True	AATAAA	-29	NA	73071702	73136168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339_73133598_73134240
ES.26136.11	chr5	+	4431	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-9	406	-9	-406	multi-exon	FALSE	canonical	2	6	junction_7	103.604717556683	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGCTGAATCATTTTT	NA	False	NA	28	True	AATAAA	-41	NA	73071702	73135748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ES.26136.12	chr5	+	1918	5	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-8	20730	-8	667	5prime_fragment	FALSE	canonical	3	204	junction_4	26.3379479079142	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAAAGAATGGTTTGA	NA	False	NA	NA	False	AATATA	-39	NA	73071703	73115424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635
ES.26136.13	chr5	+	5263	7	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	204	junction_4	22.6028513442196	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTATATTTATCTTCC	NA	False	NA	6	True	AATAAA	-25	NA	73071704	73136164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73115630_73131873_73132190_73133339
ES.26136.14	chr5	+	4094	5	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_3	109.080245690959	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTATTATTAAATCT	NA	False	NA	-7	True	AATAAA	-12	NA	73071704	73136151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73131873_73132190_73133339
ES.26136.15	chr5	+	4200	7	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-5	-406	intron_retention	FALSE	canonical	0	0	junction_1	92.1496367630147	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGCTGAATCATTTTT	NA	False	NA	28	True	AATAAA	-41	NA	73071706	73135748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.16	chr5	+	3869	5	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-4	-409	intron_retention	FALSE	canonical	0	0	junction_1	104.934205576637	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATTTGCTGAATCATT	NA	False	NA	25	True	AATAAA	-38	NA	73071707	73135745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.17	chr5	+	2880	6	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-4	19268	-4	2129	5prime_fragment	FALSE	canonical	3	204	junction_4	24.9110417285187	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTAATGACCATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	73071707	73116886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491
ES.26136.18	chr5	+	4436	7	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	3	junction_6	90.5556918881046	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTATTATTAAATCTA	NA	False	NA	-6	True	AATAAA	-13	NA	73071707	73136152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73133339
ES.26136.19	chr5	+	3371	5	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-3	19272	-3	2125	intron_retention	FALSE	canonical	3	204	junction_4	26.3379479079142	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAATTAATGACCA	NA	False	NA	NA	False	AATAAA	-15	NA	73071708	73116882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635
ES.26136.2	chr5	+	4888	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-40	-15	-40	15	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTAATTTCTGGAT	NA	False	NA	29	True	ATTAAA	-20	NA	73071606	73136187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.20	chr5	+	4860	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	-3	-29	-3	11	multi-exon	FALSE	canonical	2	6	junction_7	103.604717556683	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTATTAATTTCT	NA	False	NA	25	True	AATAAA	-44	NA	73071708	73136183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ES.26136.21	chr5	+	2095	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	-3	1779	intron_retention	FALSE	non_canonical	0	0	junction_1	82.5435491119688	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTAATATTCTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	73071708	73133824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73071994_73072321_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.22	chr5	+	4028	7	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-3	-409	intron_retention	FALSE	canonical	2	3	junction_6	90.5556918881046	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATTTGCTGAATCATT	NA	False	NA	25	True	AATAAA	-38	NA	73071708	73135745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73133339
ES.26136.23	chr5	+	4803	7	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-2	4477	intron_retention	FALSE	canonical	0	0	junction_6	91.6383289531915	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAGTTGGACTATCAT	NA	False	NA	NA	False	NA	NA	NA	73071709	73119234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73116052
ES.26136.25	chr5	+	4325	8	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	0	-431	intron_retention	FALSE	non_canonical	0	0	junction_5	88.1357950400797	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATAAATATTCTTAA	NA	False	NA	3	True	AATAAA	-16	NA	73071711	73135723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73115002_73115491_73115630_73131873_73132190_73133339
ES.26136.26	chr5	+	4775	8	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	0	11	intron_retention	FALSE	non_canonical	0	0	junction_3	84.6418625619686	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTTTATTAATTTCT	NA	False	NA	25	True	AATAAA	-44	NA	73071711	73136183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106077_73112680_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.27	chr5	+	3989	8	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	1	-410	intron_retention	FALSE	canonical	0	0	junction_1	87.8040489978006	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCATTTGCTGAATCAT	NA	False	NA	24	True	AATAAA	-37	NA	73071712	73135744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072007_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.28	chr5	+	2494	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	9	2325	9	1784	multi-exon	FALSE	canonical	2	6	junction_7	103.604717556683	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTCTGACTAATTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	73071720	73133829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ES.26136.29	chr5	+	4224	8	NIC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	16	-426	intron_retention	FALSE	canonical	2	2	junction_3	118.368501049968	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATATTCTTAACTCAA	NA	False	NA	8	True	AATAAA	-21	NA	73071727	73135728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ES.26136.3	chr5	+	2555	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	-31	2309	-31	1818	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAGGATACAGTAAATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	73071615	73133863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.30	chr5	+	4224	7	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	25	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	92.1496367630147	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATCTTCCAAGTGTT	NA	False	NA	13	True	AATAAA	-32	NA	73071783	73136171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072043_73105912_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.31	chr5	+	4268	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	38	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	82.5435491119688	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATCTTCCAAGTGTT	NA	False	NA	13	True	AATAAA	-32	NA	73071796	73136171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73071888_73072301_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.32	chr5	+	4474	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	39	7	intron_retention	FALSE	non_canonical	0	0	junction_1	82.5435491119688	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTGTTTTATTAAT	NA	False	NA	21	True	AATAAA	-40	NA	73071797	73136179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73071999_73072213_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.33	chr5	+	1421	7	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	191	1587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.6383289531915	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTTTTTGAAGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	73072201	73116344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73116052
ES.26136.34	chr5	+	7840	2	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	55449	4	21319	-4	3prime_fragment	FALSE	canonical	3	260	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTTTATTATTAAATC	NA	False	NA	-8	True	AATAAA	-11	NA	73127160	73136150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73132190_73133339
ES.26136.35	chr5	+	4297	1	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	26032	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTATCTTCCAAGTGT	NA	False	NA	12	True	AATAAA	-31	NA	73131873	73136170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73131900_73136200
ES.26136.4	chr5	+	4800	8	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-31	7	intron_retention	FALSE	non_canonical	0	0	junction_5	88.1357950400797	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTGTTTTATTAAT	NA	False	NA	21	True	AATAAA	-40	NA	73071615	73136179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114925_73115491_73115630_73131873_73132190_73133339
ES.26136.5	chr5	+	3786	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	-22	-408	intron_retention	FALSE	canonical	0	0	junction_8	82.5435491119688	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCTGAATCATTT	NA	False	NA	26	True	AATAAA	-39	NA	73071624	73135746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339_73133598_73134240
ES.26136.6	chr5	+	4704	7	NIC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-21	12	intron_retention	FALSE	canonical	2	2	junction_3	90.6839750635874	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTATTAATTTCTG	NA	False	NA	26	True	AATAAA	-45	NA	73071625	73136184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73072357_73098634_73098784_73105904_73106070_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.7	chr5	+	3982	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	14	837	14	-819	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGGATCTGAGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	73071660	73135335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.8	chr5	+	2603	9	NNC	ENSMUSG00000036087.19	novel	4828	9	NA	NA	16	1776	intron_retention	FALSE	canonical	0	0	junction_3	103.685145392192	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAACTAATATTCTGAC	NA	False	NA	NA	False	AATAAA	-11	NA	73071662	73133821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73072357_73098634_73098784_73105904_73106070_73109062_73109200_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26136.9	chr5	+	4126	7	NNC	ENSMUSG00000036087.19	novel	4833	8	NA	NA	-13	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	92.1496367630147	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGTTTATTATTAAAT	NA	False	NA	-9	True	AATAAA	-10	NA	73071698	73136149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73071994_73106024_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ES.26137.1	chr5	-	186	1	Intergenic	novelGene_21724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGCA	NA	False	NA	NA	False	NA	NA	NA	73078338	73078152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73078200_73078300
ES.26138.1	chr5	-	2539	1	Intergenic	novelGene_21725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73112433	73109894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73109900_73112400
ES.26139.1	chr5	+	705	1	Antisense	novelGene_ENSMUSG00000070733.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCCAAAGAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73181477	73182182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_73181500_73182200
ES.2614.1	chr10	-	1845	5	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	-7	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.32290411644765	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCATATATGTCTGT	5808	False	NA	9	True	AATAAA	-26	NA	39607852	39497399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39607733
ES.2614.10	chr10	-	4721	1	Antisense	novelGene_ENSMUSG00000019842.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTTGTTGTCTCTCA	5328	False	NA	NA	False	NA	NA	NA	39529439	39524718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_39524700_39529400
ES.2614.11	chr10	-	2807	4	FSM	ENSMUSG00000087177.8	ENSMUST00000149830.8	660	4	40	-2187	1	1619	multi-exon	FALSE	canonical	1	1	junction_2	9.56846672960488	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCATGTGTCCTTCT	5698	False	NA	NA	False	NA	NA	NA	39607962	39528273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39530685_39531835_39531926_39557468_39557546_39607733
ES.2614.12	chr10	-	2374	3	NIC	ENSMUSG00000087177.8	novel	660	4	NA	NA	-7	1386	intron_retention	FALSE	canonical	3	9	junction_1	7	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGTGAGTACGTATTA	5808	False	NA	NA	False	NA	NA	NA	39607852	39528506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39530685_39557468_39557546_39607733
ES.2614.13	chr10	-	3829	1	Intergenic	novelGene_1984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTAGCCCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	39591583	39587754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39587800_39591600
ES.2614.2	chr10	-	2072	6	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	5.31413210223457	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTTTTTTCAGCATA	5649	False	NA	0	True	AATAAA	-17	NA	39608011	39497408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39557468_39557546_39607733
ES.2614.3	chr10	-	1518	3	FSM	ENSMUSG00000087177.8	ENSMUST00000151921.8	1660	3	143	-1	-14	1	multi-exon	FALSE	canonical	1	2	junction_1	10.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTTTTTTCAGCATA	5801	False	NA	0	True	AATAAA	-17	NA	39607859	39497408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39498724_39557468_39557546_39607733
ES.2614.4	chr10	-	2159	7	NIC	ENSMUSG00000087177.8	novel	701	5	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	6.96818165345563	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTTTTTTCAGCATA	5855	False	NA	0	True	AATAAA	-17	NA	39607805	39497408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39498724_39498898_39499088_39508945_39509013_39515559_39515763_39516271_39516508_39557468_39557546_39607733
ES.2614.5	chr10	-	1392	2	NNC	ENSMUSG00000087177.8	novel	1660	3	NA	NA	19084	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTTTTTTCAGCAT	NA	False	NA	-1	True	AATAAA	-16	NA	39502567	39497409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39498724_39502489
ES.2614.6	chr10	-	2317	9	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	6.72216482987438	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTTTTTTCAGCAT	5849	False	NA	-1	True	AATAAA	-16	NA	39607811	39497409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39498724_39498898_39499088_39508945_39509013_39515559_39515763_39516375_39516508_39530517_39530685_39531835_39531926_39557468_39557546_39607733
ES.2614.7	chr10	-	1577	4	FSM	ENSMUSG00000087177.8	ENSMUST00000133302.8	438	4	144	-1283	-8	-1	multi-exon	FALSE	canonical	2	2	junction_2	8.65383665716478	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAGTGTTTTTTCAGCA	5807	False	NA	-2	True	AATAAA	-15	NA	39607853	39497410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39498724_39508945_39509013_39557468_39557546_39607733
ES.2614.8	chr10	-	3346	4	NNC	ENSMUSG00000087177.8	novel	830	4	NA	NA	-2339	2708	intron_retention	FALSE	canonical	0	0	junction_3	3.39934634239519	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGACCATGGTTGTCA	2119	False	NA	NA	False	TTTAAA	-38	NA	39523990	39512762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39513335_39515559_39515763_39516375_39516508_39521551
ES.2614.9	chr10	-	2387	1	Intergenic	novelGene_1983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCTTTGCTCCATT	4737	False	NA	NA	False	ATTAAA	-9	NA	39521372	39518985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39519000_39521400
ES.26140.1	chr5	+	6432	2	Antisense	novelGene_ENSMUSG00000070733.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAACCTGATCTGCC	NA	False	NA	NA	False	NA	NA	NA	73281928	73288716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_73285251_73285606
ES.26140.2	chr5	+	6785	1	Antisense	novelGene_ENSMUSG00000070733.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAACCTGATCTGCC	NA	False	NA	NA	False	NA	NA	NA	73281931	73288716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_73281900_73288700
ES.26140.3	chr5	+	3263	2	Antisense	novelGene_ENSMUSG00000070733.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAAACCTGATCTGCC	NA	False	NA	NA	False	NA	NA	NA	73283445	73288716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_73284649_73286656
ES.26141.1	chr5	+	166	1	Intergenic	novelGene_21726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATTTAAAAAAA	9997	False	NA	NA	False	NA	NA	NA	73303314	73303480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73303300_73303500
ES.26142.1	chr5	+	147	1	Intergenic	novelGene_21727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	73341925	73342072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73341900_73342100
ES.26143.1	chr5	+	226	1	Intergenic	novelGene_21728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCTAGCACTTTGAGGAC	NA	False	NA	NA	False	AAAAAG	-28	NA	73397234	73397460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73397200_73397500
ES.26144.1	chr5	-	11582	64	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-8	-146	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	11.5600462231899	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACCTGGATAGTTCTCA	NA	False	NA	58	True	AATAAA	-21	NA	73413970	73177475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.11	chr5	-	11390	64	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	11.5600462231899	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCCTTTAAATTATTA	NA	False	NA	0	True	GATAAA	-31	NA	73413967	73177664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.12	chr5	-	11183	63	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_62	13.3674554708377	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCCTTTAAATTATTA	NA	False	NA	0	True	GATAAA	-31	NA	73413928	73177664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226255_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73413742
ES.26144.13	chr5	-	8622	43	NNC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	-1999	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_34	8.91824800015621	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTGTCCTTTAAATTA	NA	False	NA	-3	True	GATAAA	-28	NA	73257721	73177667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245786_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628
ES.26144.18	chr5	-	10624	64	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	6	151	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	11.5600462231899	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTTAACTTATTTCA	NA	False	NA	NA	False	AATAAA	-31	NA	73413926	73178389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.19	chr5	-	9025	55	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-4	736	combination_of_known_junctions	FALSE	canonical	2	5	junction_42	13.738694067401	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCCCGACTGAAATGGT	NA	False	NA	NA	False	AATGAA	-14	NA	73413966	73204126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228650_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.22	chr5	-	7983	36	NIC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	-6318	686	intron_retention	FALSE	canonical	3	9	junction_12	8.6793209552878	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTTGTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73262040	73204176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226255_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017
ES.26144.23	chr5	-	9008	56	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	3	678	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	12.2396726580763	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAACTGGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	73413959	73204184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.24	chr5	-	3851	3	NNC	ENSMUSG00000070733.14	novel	723	5	NA	NA	2944	1812	intron_retention	TRUE	non_canonical	0	0	junction_1	27.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAATCCTGAGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	73225574	73219886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73221103_73221212_73222890_73224616
ES.26144.26	chr5	-	7212	48	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	12.9553678938782	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTGAGTCTTGAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	73413985	73221699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.29	chr5	-	3160	15	NNC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	-4796	1149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.1721227405812	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACAGTGTTTAGCAAT	6036	False	NA	NA	False	NA	NA	NA	73250559	73229094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250461
ES.26144.30	chr5	-	4002	2	NIC	ENSMUSG00000070733.14	novel	404	4	NA	NA	-421	1149	intron_retention	FALSE	canonical	3	43	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAACAGTGTTTAGCAAT	NA	False	NA	NA	False	NA	NA	NA	73233779	73229094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73231289_73231971
ES.26144.32	chr5	-	5140	15	NIC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	2917	1129	intron_retention	FALSE	canonical	3	32	junction_13	4.79157423749955	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3790	False	NA	NA	False	NA	NA	NA	73252805	73229114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758
ES.26144.33	chr5	-	6316	41	NNC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	2	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	15.0189671748759	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAAAGCAATTTCACT	NA	False	NA	NA	False	AATAGA	-18	NA	73413960	73229340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269778_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.34	chr5	-	2618	21	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	-22	-1974	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	15.8521291945278	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCAGATGTACAACAGGA	NA	False	NA	NA	False	AATAAA	-16	NA	73413984	73258830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.35	chr5	-	1918	13	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	-10	97888	-10	115	5prime_fragment	FALSE	canonical	3	41	junction_1	11.2875915155636	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAACCCTTCATGTAG	NA	False	NA	NA	False	AATAAA	-14	NA	73413972	73275552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.36	chr5	-	1797	13	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	-8	98007	-8	-4	5prime_fragment	FALSE	canonical	3	41	junction_1	11.2875915155636	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTTAGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-11	NA	73413970	73275671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.37	chr5	-	2154	12	FSM	ENSMUSG00000070733.14	ENSMUST00000148433.8	1899	12	-202	-53	-8	53	multi-exon	FALSE	canonical	3	44	junction_1	9.84759902776155	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCGTTCCCTGTGCCG	NA	False	NA	NA	False	NA	NA	NA	73413970	73276546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.4	chr5	-	3302	9	NIC	ENSMUSG00000070733.14	novel	5743	21	NA	NA	8	130	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	14.2565774293833	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGTGGTATTTTAA	4795	False	NA	-1	True	AATAAA	-17	NA	73207847	73177534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73204862_73205028_73207644
ES.26144.6	chr5	-	11437	63	FSM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	32	-129	2	129	multi-exon	FALSE	canonical	2	5	junction_50	12.4788270213728	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGTGTGGTATTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	73413930	73177535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ES.26144.7	chr5	-	10889	51	NIC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	3534	128	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	6.54904573201317	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTGTGGTATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	73273653	73177536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598
ES.26144.8	chr5	-	6217	26	NNC	ENSMUSG00000070733.14	novel	9852	60	NA	NA	67	128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	12.9339243851199	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGTGTGGTATTTT	NA	False	NA	-3	True	AATAAA	-15	NA	73233291	73177536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228599_73230078_73230242_73231184_73231289_73231971_73232123_73233230
ES.26145.1	chr5	-	161	1	Intergenic	novelGene_21729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	73418130	73417969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73418000_73418100
ES.26146.1	chr5	+	200	1	Intergenic	novelGene_21730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATAGAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	73424378	73424578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73424400_73424600
ES.26147.1	chr5	+	1525	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-76	1	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCATTCACATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	73450050	73471285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.10	chr5	+	2411	9	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	168	junction_1	264.563319453019	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTGTCATTCACATTT	NA	False	NA	14	True	AATAAA	-15	NA	73450151	73471283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.11	chr5	+	5025	8	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	746	junction_1	110.976739611028	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	False	NA	14	True	AATACA	-7	NA	73450152	73471412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73467770_73470785
ES.26147.12	chr5	+	1324	8	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	328.349490261675	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATTTTTATGGCTTTG	NA	False	NA	25	True	AATAAA	-26	NA	73450152	73471294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.13	chr5	+	1377	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	19	127	4	1	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCATTCACATTTTT	NA	False	NA	16	True	AATAAA	-17	NA	73450153	73471285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.14	chr5	+	3170	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	19	-1666	4	1666	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTCACTATTTCTGAG	NA	False	NA	NA	False	AATAAA	-22	NA	73450153	73473078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.15	chr5	+	1031	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	20	472	5	-317	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGGTTTGTGTAATT	NA	False	NA	NA	False	CATAAA	-14	NA	73450154	73470940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.16	chr5	+	5783	7	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-10	-11	intron_retention	FALSE	canonical	3	746	junction_1	114.977775630288	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACGGAGCAACTGTC	NA	False	NA	4	True	AATAAA	-5	NA	73450164	73471273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73462028_73463920_73467770_73470785
ES.26147.17	chr5	+	2318	9	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	159	junction_1	344.670494820778	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTGTCATTCACATTT	NA	False	NA	14	True	AATAAA	-15	NA	73450164	73471283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.18	chr5	+	3746	4	Fusion	ENSMUSG00000107331.2_ENSMUSG00000029152.14	novel	774	7	NA	NA	450	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	406.898021622126	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAACTGTCATTCACATT	NA	False	NA	13	True	AATAAA	-14	NA	73461919	73471282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_73462028_73463920_73464097_73467616_73469198_73469401
ES.26147.19	chr5	+	4916	2	NNC	ENSMUSG00000029152.14	novel	798	5	NA	NA	4695	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73466164	73471284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73469198_73469401
ES.26147.2	chr5	+	1553	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	-22	-8	-14	8	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGATTTTATT	NA	False	NA	22	True	AATACA	-15	NA	73450112	73471420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.20	chr5	+	1479	3	NNC	ENSMUSG00000029152.14	novel	798	5	NA	NA	5030	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	416	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTGTCATTCACATTT	NA	False	NA	14	True	AATAAA	-15	NA	73466499	73471283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73467770_73470785_73470905_73471193
ES.26147.21	chr5	+	1191	2	ISM	ENSMUSG00000029152.14	ENSMUST00000201739.2	798	5	14383	349	5259	-322	3prime_fragment	FALSE	canonical	3	832	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAAATCCTGGTTTGTG	NA	False	NA	NA	False	CATAAA	-9	NA	73466728	73470935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73467770_73470785
ES.26147.22	chr5	+	1435	1	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	8506	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTGTCTTTTTTTTAA	NA	False	NA	12	True	AATACA	-5	NA	73469975	73471410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73470000_73471400
ES.26147.3	chr5	+	3376	7	FSM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	-22	0	-13	0	multi-exon	FALSE	canonical	3	746	junction_1	115.10683443364	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGTTGCTTGAAAGATT	NA	False	NA	16	True	AATAAA	-27	NA	73450113	73466708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
ES.26147.4	chr5	+	1357	9	NNC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	313.312718182649	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAACTGTCATTCACATT	NA	False	NA	13	True	AATAAA	-14	NA	73450146	73471282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464073_73467616_73467770_73470785
ES.26147.6	chr5	+	1077	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	-2	-323	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGAAATCCTGGTTTGT	NA	False	NA	NA	False	CATAAA	-8	NA	73450147	73470934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ES.26147.7	chr5	+	3308	7	NNC	ENSMUSG00000029152.14	novel	3354	7	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	364.161479749483	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTACTTAATTCTCG	NA	False	NA	2	True	AATAAA	-13	NA	73450151	73466694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463936
ES.26147.8	chr5	+	1412	9	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	316.122602798345	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACGGAGCAACTGTC	NA	False	NA	4	True	AATAAA	-5	NA	73450151	73471273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464142_73467616_73467770_73470785
ES.26147.9	chr5	+	768	7	FSM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	16	2570	2	15	multi-exon	FALSE	canonical	3	746	junction_1	115.10683443364	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTATGTATACACTTTAT	NA	False	NA	NA	False	AATGAA	-20	NA	73450151	73464138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
ES.26148.1	chr5	-	2555	7	Genic_Genomic	ENSMUSG00000107292.2	novel	519	1	NA	NA	-39	14776	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTCCCCAGGGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	73465959	73450625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_73450757_73451625_73451690_73452267_73452350_73458006_73458059_73460932_73460979_73461886_73462027_73463919
ES.26148.2	chr5	-	3150	7	Genic_Genomic	ENSMUSG00000107292.2	novel	519	1	NA	NA	-39	14776	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTCCCCAGGGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	73465959	73450625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_73451352_73451625_73451690_73452267_73452350_73458006_73458059_73460932_73460979_73461886_73462027_73463919
ES.26148.4	chr5	-	3997	5	Genic_Genomic	ENSMUSG00000107292.2	novel	519	1	NA	NA	-39	14771	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTCGTCCCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	73465959	73450630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_73452350_73458006_73458059_73460932_73460979_73461886_73462027_73463919
ES.26148.5	chr5	-	3419	6	Genic_Genomic	ENSMUSG00000107292.2	novel	519	1	NA	NA	-39	14771	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTCGTCCCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	73465959	73450630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_73451690_73452267_73452350_73458006_73458059_73460932_73460979_73461886_73462027_73463919
ES.26148.6	chr5	-	3736	2	Antisense	novelGene_ENSMUSG00000029152.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTCGTCCCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	73454944	73450630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_73451690_73452267
ES.26148.7	chr5	-	5332	1	Antisense	novelGene_ENSMUSG00000029152.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTACATATAATAATAAGT	NA	False	NA	NA	False	NA	NA	NA	73462059	73456727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_73456700_73462100
ES.26149.1	chr5	-	178	1	Intergenic	novelGene_21731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGACATCTAA	NA	False	NA	0	True	NA	NA	NA	73478323	73478145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73478100_73478300
ES.2615.1	chr10	+	10766	32	NIC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_5	21.3749052976342	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGACTTTTATCTTAA	NA	False	NA	18	True	AATAAA	-14	NA	39608091	39751207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.10	chr10	+	9428	31	NNC	ENSMUSG00000019841.16	novel	10713	32	NA	NA	-3	-298	intron_retention	TRUE	canonical	0	0	junction_10	21.9961865381757	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACCTGCGACAGTTAC	NA	False	NA	NA	False	AGTAAA	-19	NA	39608119	39750186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735122_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.11	chr10	+	1382	4	NIC	ENSMUSG00000019841.16	novel	10713	32	NA	NA	-1	-42285	intron_retention	FALSE	canonical	0	0	junction_1	23.7627158941622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39608121	39676534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39666764_39666840_39670859_39671021_39675876
ES.2615.12	chr10	+	9804	25	NNC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	0	5	intron_retention	FALSE	non_canonical	0	0	junction_14	23.4134042804544	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTTATCTTAACATAA	NA	False	NA	23	True	AATAAA	-19	NA	39608122	39751212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682827_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39722177_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.13	chr10	+	10969	33	NNC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	41	-1	intron_retention	FALSE	canonical	0	0	junction_4	21.1105488663251	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	17	True	AATAAA	-13	NA	39608163	39751206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39667019_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.14	chr10	+	183	1	Intergenic	novelGene_1986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATGACTATGTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	39631585	39631768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39631600_39631800
ES.2615.15	chr10	+	8752	22	NNC	ENSMUSG00000019841.16	novel	10713	32	NA	NA	-4683	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.8152339492571	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAAAAATT	NA	False	NA	-19	True	NA	NA	NA	39696443	39750928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708511_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.16	chr10	+	6318	20	NNC	ENSMUSG00000019841.16	novel	4858	21	NA	NA	-972	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9696445536997	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTGCTATGACTTTTA	NA	False	NA	12	True	AATAAA	-8	NA	39700154	39751201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39701873_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.17	chr10	+	4921	21	NNC	ENSMUSG00000019841.16	novel	4858	21	NA	NA	-50	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.6092642338107	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTGCTATGACTTT	NA	False	NA	10	True	AATAAA	-6	NA	39701076	39751199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712795_39712926_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.18	chr10	+	4753	19	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	95198	-4	-712	-1	3prime_fragment	FALSE	canonical	3	48	junction_8	13.1444961020869	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	17	True	AATAAA	-13	NA	39703557	39751206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.19	chr10	+	4070	19	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	95630	247	-280	-209	3prime_fragment	FALSE	canonical	3	48	junction_8	13.1444961020869	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTGTTTTGTATAGA	NA	False	NA	8	True	AATAAA	-19	NA	39703989	39750955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.2	chr10	+	10847	33	FSM	ENSMUSG00000019841.16	ENSMUST00000131186.8	10789	33	-16	-42	-7	-1	multi-exon	FALSE	canonical	3	21	junction_2	18.85944619912	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	17	True	AATAAA	-13	NA	39608106	39751206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.20	chr10	+	3966	20	NNC	ENSMUSG00000019841.16	novel	4858	21	NA	NA	-164	12198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	19.9696445536997	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAACTACCCTGACCTTG	NA	False	NA	NA	False	NA	NA	NA	39704105	39763405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079_39750950_39763387
ES.2615.21	chr10	+	4132	20	NNC	ENSMUSG00000019841.16	novel	4858	21	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.2748101985443	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGCTATGACTTTTAT	NA	False	NA	13	True	AATAAA	-9	NA	39704493	39751202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712926_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.22	chr10	+	4281	11	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	112331	3	-14230	-3	3prime_fragment	FALSE	canonical	3	51	junction_10	14.5821809068465	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTGCTATGACTTT	NA	False	NA	10	True	AATAAA	-6	NA	39720690	39751199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.23	chr10	+	2830	11	ISM	ENSMUSG00000019841.16	ENSMUST00000139803.2	4858	21	21535	-3	-12259	0	3prime_fragment	FALSE	canonical	2	7	junction_3	27.4009123935682	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGACTTTTATCTTAA	NA	False	NA	18	True	AATAAA	-14	NA	39722661	39751207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.24	chr10	+	4703	8	ISM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	117141	0	-9420	0	3prime_fragment	FALSE	canonical	3	51	junction_7	12.0288768200119	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGCTATGACTTTTAT	NA	False	NA	13	True	AATAAA	-9	NA	39725500	39751202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.25	chr10	+	3740	6	ISM	ENSMUSG00000019841.16	ENSMUST00000139803.2	4858	21	32010	252	-1784	-212	3prime_fragment	FALSE	canonical	3	51	junction_5	14.1081536708387	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGCTTGTTTTGTAT	720	False	NA	5	True	AATAAA	-16	NA	39733136	39750952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.26	chr10	+	3932	1	NIC	ENSMUSG00000019841.16	novel	10713	32	NA	NA	4164	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGTGCTATGACTTTT	NA	False	NA	11	True	AATAAA	-7	NA	39747268	39751200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39747300_39751200
ES.2615.3	chr10	+	10845	33	NIC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	7	junction_25	20.9528628339304	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTATGACTTTTATCTTA	NA	False	NA	17	True	AATAAA	-13	NA	39608107	39751206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.4	chr10	+	5733	31	NNC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_10	24.9782349701139	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGTGCTATGACTTT	NA	False	NA	10	True	AATAAA	-6	NA	39608112	39751199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682827_39682980_39693137_39693376_39696443_39696587_39697101_39697167_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.5	chr10	+	10712	32	FSM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	-1	2	-1	1	multi-exon	FALSE	canonical	3	30	junction_10	17.5666413596239	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTATGACTTTTATCTT	NA	False	NA	16	True	AATAAA	-12	NA	39608112	39751205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.6	chr10	+	10710	32	NIC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_10	20.8396084895547	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACAGTGCTATGACT	NA	False	NA	8	True	AATAAA	-4	NA	39608114	39751197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.2615.7	chr10	+	8624	16	ISM	ENSMUSG00000019841.16	ENSMUST00000131186.8	10789	33	-8	42776	1	-10431	5prime_fragment	FALSE	canonical	3	21	junction_2	8.89344327768122	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTTTATCATGTTC	NA	False	NA	NA	False	AATAAA	-39	NA	39608114	39708388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894
ES.2615.8	chr10	+	5598	4	NIC	ENSMUSG00000019841.16	novel	10713	32	NA	NA	2	-42285	intron_retention	FALSE	canonical	3	32	junction_1	9.39266853573691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39608115	39676534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39659138_39659329_39666764_39671021_39675876
ES.2615.9	chr10	+	10961	34	NIC	ENSMUSG00000019841.16	novel	10789	33	NA	NA	3	1	intron_retention	FALSE	canonical	2	7	junction_26	21.7519617978915	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGCTATGACTTTTATC	NA	False	NA	14	True	AATAAA	-10	NA	39608116	39751203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727272_39727400_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ES.26150.1	chr5	-	2479	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	53	22	9	-8	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAAGGCAGAGCC	NA	False	NA	-23	True	AATAAA	-13	NA	73496282	73479563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ES.26150.2	chr5	-	5825	5	NIC	ENSMUSG00000029153.12	novel	2378	6	NA	NA	-34	-12	intron_retention	FALSE	canonical	3	44	junction_4	49.595236666438	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAAAATCACAAGGCAG	NA	False	NA	-27	True	AATAAA	-9	NA	73495935	73479567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ES.26150.3	chr5	-	1121	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	-29	1462	-29	-315	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTCACCCCTTTGAA	NA	False	NA	5	True	AATATA	-24	NA	73496364	73481003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ES.26150.4	chr5	-	1095	7	NNC	ENSMUSG00000029153.12	novel	491	5	NA	NA	145	-1276	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.6376262499005	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGGCATTGTGATGAC	NA	False	NA	NA	False	AATAAA	-17	NA	73496146	73481964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73482344_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ES.26150.5	chr5	-	177	1	Intergenic	novelGene_21732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACATGGAT	NA	False	NA	NA	False	NA	NA	NA	73487495	73487318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73487300_73487500
ES.26150.6	chr5	-	538	3	ISM	ENSMUSG00000029153.12	ENSMUST00000201908.4	2378	6	184	9810	184	-4358	5prime_fragment	FALSE	canonical	3	44	junction_2	59.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAAATTAATAATC	NA	False	NA	NA	False	AATAAA	-27	NA	73496107	73489365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_73489544_73493162_73493289_73495873
ES.26151.1	chr5	-	155	1	Intergenic	novelGene_21733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	73499186	73499031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73499000_73499200
ES.26152.1	chr5	+	3472	2	Intergenic	novelGene_21734	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTG	3340	False	NA	NA	False	NA	NA	NA	73506023	73517671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73506135_73514310
ES.26153.1	chr5	+	4262	4	NNC	ENSMUSG00000107272.2	novel	451	2	NA	NA	-6128	-5	intron_retention	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTAATTTTGTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	73531774	73538761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73533958_73535269_73535376_73535937_73536056_73536906
ES.26154.1	chr5	-	136	1	Intergenic	novelGene_21735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	73562936	73562800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73562800_73562900
ES.26155.1	chr5	-	158	1	Intergenic	novelGene_21736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAAATAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	73565961	73565803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73565800_73566000
ES.26156.1	chr5	+	130	1	Intergenic	novelGene_21737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73570603	73570733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73570600_73570700
ES.26157.1	chr5	+	1646	10	ISM	ENSMUSG00000029154.14	ENSMUST00000031040.13	2716	16	11699	151	11547	-151	3prime_fragment	FALSE	canonical	1	1	junction_1	0.737027731190089	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTTTTGTTTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	73575116	73610617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73575545_73578796_73578923_73581257_73581338_73585909_73586016_73587754_73587891_73589166_73589317_73591566_73591712_73595777_73595840_73598647_73598804_73610360
ES.26158.1	chr5	+	179	1	Intergenic	novelGene_21738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAACTATTAAAAA	4342	False	NA	NA	False	NA	NA	NA	73636677	73636856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73636700_73636900
ES.26159.1	chr5	-	238	1	Intergenic	novelGene_21739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGACCCTTAGCTA	NA	False	NA	NA	False	AATAAA	-24	NA	73637284	73637046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73637000_73637300
ES.2616.1	chr10	-	180	1	Intergenic	novelGene_1985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39624671	39624491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39624500_39624700
ES.26160.1	chr5	+	4310	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-82	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.7242976981495	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	NA	False	NA	13	True	AATAAA	-24	NA	73648285	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668001_73668108_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.10	chr5	+	4150	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	50.51094309059	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGGGTCTTTGTAC	NA	False	NA	17	True	AATAAA	-28	NA	73648422	73718135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.12	chr5	+	2669	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	53	1394	19	-1394	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACCAACAACCCGAT	NA	False	NA	NA	False	AATAAA	-11	NA	73648428	73716739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.13	chr5	+	1344	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	64	2708	-26	797	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTCTCAAATTTCAGA	NA	False	NA	NA	False	AATGAA	-14	NA	73648439	73715425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.14	chr5	+	3938	10	NIC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	48.3071448847226	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	12	True	AATAAA	-23	NA	73648441	73718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73712701_73712807_73714596_73714700_73714974
ES.26160.15	chr5	+	4130	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.8319961943026	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	NA	False	NA	13	True	AATAAA	-24	NA	73648442	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73710821_73710905_73712701_73712807_73714596_73714700_73714974
ES.26160.16	chr5	+	4018	11	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	62.434685872518	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	15	True	AATAAA	-26	NA	73648447	73718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ES.26160.17	chr5	+	4061	12	NNC	ENSMUSG00000051674.16	novel	493	6	NA	NA	217	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	61.8767102610285	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGGGTCTTTGTACT	NA	False	NA	18	True	AATAAA	-29	NA	73648997	73718136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73649020_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.18	chr5	+	4461	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	44.337907032245	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	15	True	AATAAA	-26	NA	73649915	73718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.19	chr5	+	4523	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	60.4059271351566	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGGGTCTTTGTACT	NA	False	NA	18	True	AATAAA	-29	NA	73649935	73718136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.2	chr5	+	4185	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	11	-80	11	76	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTTGCCTTTCAGCCT	NA	False	NA	95	True	TTTAAA	-28	NA	73648386	73718213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.20	chr5	+	4323	10	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	61.5090076711644	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73649952	73718137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ES.26160.21	chr5	+	3829	5	NIC	ENSMUSG00000051674.16	novel	714	5	NA	NA	-39	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.9635992087493	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	NA	False	NA	11	True	AATAAA	-22	NA	73649959	73718129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73714596_73714700_73714974
ES.26160.22	chr5	+	4158	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8238	58	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTTAAATGTTTTA	8104	False	NA	77	True	TTTAAA	-10	NA	73659972	73718195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.23	chr5	+	3988	10	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8236	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	55.4677083235522	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGGGTCTTTGTACT	8106	False	NA	18	True	AATAAA	-29	NA	73659974	73718136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73712701_73712807_73714596_73714700_73714974
ES.26160.24	chr5	+	3980	10	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8233	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	54.9648597057168	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTGATTTGTGGGGT	8109	False	NA	9	True	AATAAA	-20	NA	73659977	73718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ES.26160.25	chr5	+	2695	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8231	-1394	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACCAACAACCCGAT	8111	False	NA	NA	False	AATAAA	-11	NA	73659979	73716739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.26	chr5	+	4266	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8204	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.6736254544407	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	8138	False	NA	13	True	AATAAA	-24	NA	73660006	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73678181_73678388_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.27	chr5	+	3901	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8204	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	52.1445860204074	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	8138	False	NA	13	True	AATAAA	-24	NA	73660006	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974_73716253_73716411
ES.26160.28	chr5	+	4141	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8204	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	55.4682546392734	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	8138	False	NA	15	True	AATAAA	-26	NA	73660006	73718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.29	chr5	+	3839	9	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8199	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	59.4306318324145	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	8143	False	NA	11	True	AATAAA	-22	NA	73660011	73718129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73714596_73714700_73714974
ES.26160.3	chr5	+	6517	10	NIC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	110	junction_1	18.2925472242282	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	12	True	AATAAA	-23	NA	73648393	73718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.30	chr5	+	4138	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8199	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.8369565752738	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	8143	False	NA	13	True	AATAAA	-24	NA	73660011	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73710821_73710905_73712701_73712807_73714596_73714700_73714974
ES.26160.31	chr5	+	4016	10	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8198	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	56.0299743413412	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	8144	False	NA	15	True	AATAAA	-26	NA	73660012	73718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73660112_73668228_73668300_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.32	chr5	+	4114	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8188	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.6973578206128	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGATTTGTGGGGTCTTT	8154	False	NA	13	True	AATAAA	-24	NA	73660022	73718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679044_73679115_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.33	chr5	+	4011	11	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8186	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	65.2396351921131	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	8156	False	NA	12	True	AATAAA	-23	NA	73660024	73718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73712701_73712807_73714596_73714700_73714974
ES.26160.34	chr5	+	301	1	Intergenic	novelGene_21741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACCCAAAGTTATTT	NA	False	NA	NA	False	NA	NA	NA	73699350	73699651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_73699400_73699700
ES.26160.4	chr5	+	4364	10	ISM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	24	3	-10	-3	intron_retention	FALSE	canonical	3	110	junction_1	16.4519502390041	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	12	True	AATAAA	-23	NA	73648399	73718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596
ES.26160.5	chr5	+	4077	11	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.1211448253401	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTGATTTGTGGGGT	NA	False	NA	9	True	AATAAA	-20	NA	73648402	73718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714980
ES.26160.6	chr5	+	4298	13	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.6259771660674	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	15	True	AATAAA	-26	NA	73648402	73718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73678257_73678388_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.7	chr5	+	4212	12	NIC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-6	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	59.5358076849068	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTGATTTGTGGGGT	NA	False	NA	9	True	AATAAA	-20	NA	73648403	73718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73678257_73678388_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.8	chr5	+	4242	13	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.3820553791981	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTGATTTGTGGGGT	NA	False	NA	9	True	AATAAA	-20	NA	73648405	73718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677281_73677365_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ES.26160.9	chr5	+	3968	10	FSM	ENSMUSG00000051674.16	ENSMUST00000113558.8	4023	10	48	7	6	-3	multi-exon	FALSE	canonical	3	10	junction_8	47.4083911934961	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGATTTGTGGGGTCTT	NA	False	NA	12	True	AATAAA	-23	NA	73648415	73718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ES.26161.1	chr5	-	175	1	Intergenic	novelGene_21740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	73664674	73664499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_73664500_73664700
ES.26162.1	chr5	-	3991	5	NIC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	67	-2	intron_retention	FALSE	canonical	3	39	junction_4	20.3638773321782	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	73805066	73790093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73805017
ES.26162.10	chr5	-	3135	5	NIC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	70	-855	intron_retention	FALSE	canonical	3	39	junction_4	20.3638773321782	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTATATTACAAAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	73805063	73790946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73805017
ES.26162.11	chr5	-	3098	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.3291391665793	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAACCCTATATTACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	73823713	73790949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823499_73823648
ES.26162.12	chr5	-	2485	4	NIC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	65	-858	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28.6395220320141	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAACCCTATATTACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	73805068	73790949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73793042_73796725_73796858_73801614_73801825_73805017
ES.26162.13	chr5	-	6370	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18573	-858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.0182386209903	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAACCCTATATTACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	73823706	73790949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73796338_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.14	chr5	-	4069	6	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18596	-862	intron_retention	FALSE	canonical	0	0	junction_4	34.4348660517215	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCACAGAACCCTATATTA	NA	False	NA	NA	False	AATAAA	-13	NA	73823729	73790953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.15	chr5	-	3342	7	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18573	-864	intron_retention	FALSE	canonical	0	0	junction_5	32.1580299286024	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCACAGAACCCTATAT	NA	False	NA	NA	False	AATAAA	-11	NA	73823706	73790955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.16	chr5	-	1471	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	60	2255	60	-2255	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCTTGTAAGAAACTAT	NA	False	NA	NA	False	NA	NA	NA	73805073	73792346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ES.26162.17	chr5	-	1473	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18590	-2476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.3052497641136	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTACTATATCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	73823723	73792567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.18	chr5	-	2422	6	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18573	-2486	intron_retention	FALSE	canonical	0	0	junction_4	34.4348660517215	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTTTAACATTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	73823706	73792577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.19	chr5	-	1257	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	42	2487	42	-2487	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTTTTTAACATTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	73805091	73792578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ES.26162.2	chr5	-	4905	6	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18572	-2	intron_retention	FALSE	canonical	0	0	junction_4	34.4348660517215	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	73823705	73790093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.21	chr5	-	1716	7	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18570	-2487	intron_retention	FALSE	canonical	0	0	junction_5	32.1580299286024	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTTTTTAACATTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	73823703	73792578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.22	chr5	-	2213	4	NIC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	61	-2488	intron_retention	FALSE	canonical	3	39	junction_3	23.2999761564017	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGTTTTTAACATTCT	NA	False	NA	NA	False	AATAAA	-15	NA	73805072	73792579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_73793042_73796725_73798212_73801614_73801825_73805017
ES.26162.3	chr5	-	3936	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18579	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.3052497641136	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	73823712	73790093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.4	chr5	-	3736	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	48	2	48	-2	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCAGTTTCTTCGTGAC	NA	False	NA	NA	False	AATAAA	-15	NA	73805085	73790093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ES.26162.5	chr5	-	3946	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.7845353486533	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGGTCAGTTTCTTCG	NA	False	NA	NA	False	AATAAA	-11	NA	73823713	73790097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798029_73798212_73801614_73801825_73817744_73817831_73823363_73823499_73823648
ES.26162.6	chr5	-	2713	6	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18580	-848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.6093732840146	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTACAAAGTATTATTTA	NA	False	NA	NA	False	AATAAA	-27	NA	73823713	73790939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.7	chr5	-	3077	8	NNC	ENSMUSG00000029156.12	novel	3786	6	NA	NA	-18570	-852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.3052497641136	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTATATTACAAAGTATTA	NA	False	NA	NA	False	AATAAA	-23	NA	73823703	73790943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73817744_73817831_73823363_73823482_73823648
ES.26162.8	chr5	-	2891	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	42	853	42	-853	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTATATTACAAAGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	73805091	73790944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ES.26163.1	chr5	+	1169	7	NNC	ENSMUSG00000029155.17	novel	1978	13	NA	NA	7226	1	intron_retention	FALSE	canonical	0	0	junction_1	1.15470053837925	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTCGATAGAGTTG	NA	False	NA	NA	False	TATAAA	-15	NA	73823829	73832765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_73823856_73824194_73824291_73825864_73826072_73826781_73827077_73828454_73828617_73829680_73829857_73832558
ES.26164.1	chr5	+	1854	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	-50	-956	-50	956	multi-exon	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATCTGTTTCCTTCA	NA	False	NA	NA	False	ACTAAA	-18	NA	74103673	74106675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74103968_74105115
ES.26164.2	chr5	+	2997	1	Genic_Genomic	ENSMUSG00000106968.2	novel	NA	NA	NA	NA	-49	952	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGGAATCTGTTTCC	NA	False	NA	NA	False	ACTAAA	-14	NA	74103674	74106671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_74103700_74106700
ES.26164.3	chr5	+	1666	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	1	-819	1	819	multi-exon	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTCTGTTCCTCTAGA	NA	False	NA	NA	False	NA	NA	NA	74103724	74106538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74103968_74105115
ES.26164.4	chr5	+	2813	1	Genic_Genomic	ENSMUSG00000106968.2	novel	NA	NA	NA	NA	1	818	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTTCTGTTCCTCTAG	NA	False	NA	NA	False	NA	NA	NA	74103724	74106537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_74103700_74106500
ES.26165.1	chr5	+	158	1	Intergenic	novelGene_21742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAACAAATCTAAA	8599	False	NA	NA	False	NA	NA	NA	74203886	74204044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_74203900_74204000
ES.26166.1	chr5	+	2090	1	Antisense	novelGene_ENSMUSG00000054814.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	74225779	74227869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_74225800_74227900
ES.26167.1	chr5	-	4712	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-26	-129	-26	129	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTAGTTTTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	74229118	74159257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.10	chr5	-	3580	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	50	927	39	-927	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTGTCCCATGCCCCA	NA	False	NA	NA	False	AATAAA	-13	NA	74229042	74160313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.11	chr5	-	3717	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-471	1311	-471	-1311	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCTAATTTATTAG	NA	False	NA	0	True	ATTAAA	-18	NA	74229563	74160697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.12	chr5	-	3145	8	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	11	-1311	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	100.792370945505	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCTAATTTATTAG	NA	False	NA	0	True	ATTAAA	-18	NA	74229070	74160697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.13	chr5	-	3176	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	-11	-1312	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74226420	74160698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.14	chr5	-	3390	11	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	22	-1312	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	122.973330442011	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74229059	74160698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74200468_74200566_74226307_74226389_74228910
ES.26167.15	chr5	-	3303	10	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	28	-1312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.048662088501	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74229053	74160698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74200468_74200566_74228910
ES.26167.16	chr5	-	3334	10	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	13	-1312	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	112.432695916762	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74226396	74160698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74209326_74209509_74226307
ES.26167.17	chr5	-	3308	10	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	23	-1314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.245197155075	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTGCAGCTAATTTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	74226386	74160700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163359_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74209326_74209509_74226307
ES.26167.19	chr5	-	3520	12	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	43	-1315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	129.656507423867	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCTTGCAGCTAATTTA	NA	False	NA	-4	True	ATTAAA	-14	NA	74226366	74160701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74200468_74200566_74208995_74209118_74209326_74209509_74226307
ES.26167.2	chr5	-	4605	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	1	129	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTAGTTTTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	74226408	74159257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.20	chr5	-	3073	8	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	2	-1318	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	95.1029517342728	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTCTTGCAGCTAAT	NA	False	NA	-7	True	ATTAAA	-11	NA	74226407	74160704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.21	chr5	-	2893	7	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	28	-1318	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	103.107414325493	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTCTTGCAGCTAAT	NA	False	NA	-7	True	ATTAAA	-11	NA	74229053	74160704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74192964_74193179_74197693_74197775_74228910
ES.26167.22	chr5	-	3035	9	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	44	-1318	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	96.8186933138431	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTCTTGCAGCTAAT	NA	False	NA	-7	True	ATTAAA	-11	NA	74226365	74160704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74189952_74192964_74193179_74197693_74197775_74226307
ES.26167.23	chr5	-	2913	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	20	1529	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCCCCTCCATGAAG	NA	False	NA	NA	False	TATAAA	-11	NA	74226389	74160930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.24	chr5	-	2980	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	28	1549	17	1524	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATTTCCCCCTCCA	NA	False	NA	NA	False	TATAAA	-6	NA	74229064	74160935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.25	chr5	-	2596	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-2	1963	-2	1110	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTATGGGTCATAGTC	NA	False	NA	0	True	NA	NA	NA	74229094	74161349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.26	chr5	-	2487	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	6	1089	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTCTTGGTTTTCCTA	NA	False	NA	-21	True	ATTAAA	-27	NA	74226403	74161370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.28	chr5	-	2497	10	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	79	1075	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	111.821285987955	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTACCATTGAATGGG	NA	False	NA	-35	True	ATTAAA	-13	NA	74226330	74161384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74200468_74200566_74226307
ES.26167.29	chr5	-	1444	2	NNC	ENSMUSG00000054814.15	novel	2969	2	NA	NA	2902	1752	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTCAAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	74187127	74185201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74185917_74186398
ES.26167.30	chr5	-	2996	1	Genic_Genomic	ENSMUSG00000054814.15	novel	NA	NA	NA	NA	1780	1700	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTAAAATAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	74188249	74185253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_74185300_74188200
ES.26167.4	chr5	-	3589	1	NIC	ENSMUSG00000054814.15	novel	4738	8	NA	NA	27175	121	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAAGCTTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	74162854	74159265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74159300_74162900
ES.26167.5	chr5	-	4627	10	NNC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	21	74	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	111.821285987955	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	74226388	74159312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74200468_74200566_74226307
ES.26167.6	chr5	-	4558	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	-1	0	-1	0	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGGCTCCTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	74229093	74159386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ES.26167.7	chr5	-	4472	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTTTGGCTCCTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	74226406	74159388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.8	chr5	-	3824	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	1	-652	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAACATTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	74226408	74160038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26167.9	chr5	-	3542	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	10	-925	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCCCATGCCCCATC	NA	False	NA	NA	False	AATAAA	-15	NA	74226399	74160311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
ES.26168.1	chr5	+	191	1	Intergenic	novelGene_21743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCTTCAAAAGTATATAA	NA	False	NA	NA	False	NA	NA	NA	74240380	74240571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_74240400_74240600
ES.26169.1	chr5	-	192	1	Intergenic	novelGene_21744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGAACTCAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	74246503	74246311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74246300_74246500
ES.2617.1	chr10	-	178	1	Intergenic	novelGene_1987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTTACATAGCAA	NA	False	NA	NA	False	NA	NA	NA	39642413	39642235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39642200_39642400
ES.26170.1	chr5	+	571	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	3	1	3	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTCACTTGTTCT	NA	False	NA	18	True	AATAAA	-20	NA	74253740	74254997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74253801_74254018_74254081_74254548
ES.26170.2	chr5	+	1039	2	FSM	ENSMUSG00000106943.3	ENSMUST00000117249.2	1036	2	-3	0	3	0	multi-exon	FALSE	canonical	3	72	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTCACTTGTTCT	NA	False	NA	18	True	AATAAA	-20	NA	74253740	74254997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74253801_74254018
ES.26170.3	chr5	+	1254	1	FSM	ENSMUSG00000106943.3	ENSMUST00000066220.4	2346	1	23	1069	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTCACTTGTTCT	NA	False	NA	18	True	AATAAA	-20	NA	74253743	74254997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74253700_74255000
ES.26170.4	chr5	+	732	2	NIC	ENSMUSG00000106943.3	novel	575	3	NA	NA	54	0	intron_retention	FALSE	canonical	3	119	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTCACTTGTTCT	NA	False	NA	18	True	AATAAA	-20	NA	74253797	74254997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74254081_74254548
ES.26171.1	chr5	+	5634	1	FSM	ENSMUSG00000106943.3	ENSMUST00000132389.3	2347	1	1312	-4599	1289	4599	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCACATACATTCTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74255032	74260666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74255000_74260700
ES.26172.1	chr5	-	1746	1	Intergenic	novelGene_21745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCCCGTTTCCAGTTC	NA	False	NA	NA	False	AAAAAG	-14	NA	74287254	74285508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74285500_74287300
ES.26173.1	chr5	+	862	1	FSM	ENSMUSG00000049907.9	ENSMUST00000201837.2	1582	1	723	-3	723	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACATCTGACTGGGTC	NA	False	NA	15	True	AATAAA	-17	NA	74359274	74360136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74359300_74360100
ES.26174.1	chr5	+	2342	1	Intergenic	novelGene_21746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAGAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	74426909	74429251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_74426900_74429300
ES.26175.1	chr5	+	6173	1	Antisense	novelGene_ENSMUSG00000062110.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGACTATATACTGGAG	NA	False	NA	NA	False	AATAAA	-38	NA	74550161	74556334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_74550200_74556300
ES.26176.1	chr5	-	2426	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	-12	1258	-2	15	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGACTTCGCCAGCTG	NA	False	NA	12	True	AATAAA	-40	NA	74692422	74366734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
ES.26176.2	chr5	-	3543	9	NNC	ENSMUSG00000062110.15	novel	3672	9	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.915006574228	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTCAAGCTGTCGCT	NA	False	NA	-6	True	AATAAA	-22	NA	74692372	74366752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74367057_74371726_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
ES.26176.3	chr5	-	4939	1	Genic_Genomic	ENSMUSG00000084132.3	novel	NA	NA	NA	NA	-3596	-494	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTTTGACCATAGCA	9034	False	NA	NA	False	NA	NA	NA	74522676	74517737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_74517700_74522700
ES.26176.4	chr5	-	183	1	Intergenic	novelGene_21747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	74545286	74545103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74545100_74545300
ES.26176.5	chr5	-	2063	6	NIC	ENSMUSG00000062110.15	novel	436	2	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.2239550858236	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAAGTCTACTGGTTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	74692431	74555793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_74556145_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
ES.26176.6	chr5	-	3117	2	Genic_Genomic	ENSMUSG00000106992.2	novel	1606	1	NA	NA	-1680	-19	multi-exon	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74593446	74590179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_74591986_74592135
ES.26177.1	chr5	+	4682	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	-70	-2643	-38	-2	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696071	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.10	chr5	+	4749	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696114	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.11	chr5	+	3962	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	9	702	9	-702	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696118	74758749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.12	chr5	+	4818	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	9	4	intron_retention	FALSE	canonical	3	110	junction_9	229.420784136424	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGGTCATTACCCT	NA	False	NA	17	True	AATAAA	-26	NA	74696118	74759455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.13	chr5	+	5131	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	10	-2	intron_retention	FALSE	canonical	2	2	junction_6	212.420715923926	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696119	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706500_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.14	chr5	+	2064	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	17	2592	-5	53	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCTAAGAAAGTAATGTG	NA	False	NA	75	True	AATAAA	-17	NA	74696126	74756859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.15	chr5	+	2105	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	204.433642502527	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAAAAGCTTTGTCTT	NA	False	NA	20	True	AATAAA	-21	NA	74696132	74756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756505
ES.26177.16	chr5	+	3921	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	-9	-1943	1	-702	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696132	74758749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.17	chr5	+	2088	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	220	junction_12	176.742209428733	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696133	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.18	chr5	+	2104	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	211.235728208966	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAAAAGCTTTGTCTT	NA	False	NA	20	True	AATAAA	-21	NA	74696133	74756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717706_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.19	chr5	+	2983	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	24	1666	2	979	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGAGAACAGTCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	74696133	74757785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.2	chr5	+	4776	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-36	-2	intron_retention	TRUE	canonical	3	110	junction_9	206.218767164378	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696073	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.20	chr5	+	2069	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	217.296420529653	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696134	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.21	chr5	+	2233	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	3	53	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	215.964760499897	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCTAAGAAAGTAATGTG	NA	False	NA	75	True	AATAAA	-17	NA	74696134	74756859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.22	chr5	+	1985	15	ISM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	27	6368	-3	-8	5prime_fragment	FALSE	canonical	3	373	junction_9	120.769387255046	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTGATTTACTGA	NA	False	NA	NA	False	AATAAA	-26	NA	74696136	74753083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434
ES.26177.23	chr5	+	5107	1	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-2	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGGAAAAAAGACCTATT	NA	False	NA	NA	False	NA	NA	NA	74696137	74701244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696100_74701200
ES.26177.24	chr5	+	4023	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-1	-702	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696138	74758749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.25	chr5	+	4701	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	244.019228920684	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696140	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696415_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.26	chr5	+	4820	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	2	intron_retention	FALSE	canonical	3	110	junction_9	215.964760499897	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTTTGGTCATTACC	NA	False	NA	15	True	AATAAA	-24	NA	74696141	74759453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.27	chr5	+	4092	17	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	52	intron_retention	FALSE	non_canonical	0	0	junction_4	213.880661818688	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	74	True	AATAAA	-16	NA	74696141	74756858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702663_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.28	chr5	+	2996	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	1	920	combination_of_known_junctions	FALSE	canonical	3	220	junction_12	176.742209428733	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGACTTGGAGTAATAA	NA	False	NA	NA	False	ATTAAA	-13	NA	74696142	74757726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.29	chr5	+	3980	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	1	-702	intron_retention	FALSE	canonical	3	110	junction_9	220.557452478374	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696142	74758749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.3	chr5	+	4708	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	-35	0	-35	0	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696074	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.30	chr5	+	2953	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	2	-986	-1	986	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGTCTCTGAGGTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	74696143	74757792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.31	chr5	+	2066	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-1	3	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	206.218767164378	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696143	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.33	chr5	+	2089	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-1	53	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	220.557452478374	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCTAAGAAAGTAATGTG	NA	False	NA	75	True	AATAAA	-17	NA	74696143	74756859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.35	chr5	+	4112	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-1	-704	intron_retention	FALSE	canonical	3	110	junction_9	215.964760499897	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTAGTATTATTTTC	NA	False	NA	NA	False	NA	NA	NA	74696143	74758747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.36	chr5	+	4731	17	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	210.349773814354	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696146	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733254_74747654_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.37	chr5	+	3335	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	259	junction_9	166.19283556685	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696146	74756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.38	chr5	+	4624	17	NNC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_16	192.388441700639	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74696150	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756505
ES.26177.39	chr5	+	2325	16	NNC	ENSMUSG00000029227.16	novel	1969	16	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	215.247826160142	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696150	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706500_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.4	chr5	+	4802	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	-43	10	-21	0	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696088	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.40	chr5	+	3077	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	20	1672	7	983	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAACAGTCTCTGAGGT	NA	False	NA	NA	False	AATAAA	-22	NA	74696151	74757789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.41	chr5	+	4093	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	8	1	intron_retention	FALSE	canonical	3	110	junction_9	218.862583485225	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTTGTCTTGTA	NA	False	NA	23	True	AATAAA	-24	NA	74696152	74756807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.42	chr5	+	4669	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	110	junction_9	220.557452478374	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696155	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.44	chr5	+	4620	17	NNC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-7	0	intron_retention	FALSE	canonical	2	11	junction_8	197.99270030736	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696156	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717706_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.46	chr5	+	3985	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-6	-709	intron_retention	FALSE	canonical	3	110	junction_9	206.218767164378	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGGACTTAGTATTA	NA	False	NA	NA	False	NA	NA	NA	74696157	74758742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.47	chr5	+	1892	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	17	60	-5	-60	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATGAAACGTTAACTTT	NA	False	NA	-38	True	AATATA	-19	NA	74696158	74756746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.48	chr5	+	2028	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	29	2712	-3	-57	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACGTTAACTTTTTT	NA	False	NA	-35	True	AATATA	-22	NA	74696160	74756749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.49	chr5	+	2012	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-2	600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	194.512806349376	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGTTAGATCAGTCAT	NA	False	NA	NA	False	AATAAA	-22	NA	74696161	74757406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499_74756662_74757225
ES.26177.5	chr5	+	2207	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	-40	2602	-18	53	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCTAAGAAAGTAATGTG	NA	False	NA	75	True	AATAAA	-17	NA	74696091	74756859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.50	chr5	+	2150	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	254.999423298079	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696161	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706409_74706500_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.52	chr5	+	4055	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	6	-708	intron_retention	FALSE	canonical	3	110	junction_9	229.420784136424	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGACTTAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	74696169	74758743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.53	chr5	+	4640	19	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	7	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	237.974295738214	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAATGAAGTTTGGTCA	NA	False	NA	10	True	AATAAA	-19	NA	74696170	74759448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696305_74696342_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.55	chr5	+	2005	17	NNC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	9	46	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	197.99270030736	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTTATATCTAAGAAAG	NA	False	NA	68	True	AATAAA	-10	NA	74696172	74756852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717706_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.57	chr5	+	3125	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	10	984	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	215.964760499897	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACAGTCTCTGAGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	74696173	74757790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.58	chr5	+	2166	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	10	52	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	229.420784136424	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	74	True	AATAAA	-16	NA	74696173	74756858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.6	chr5	+	4097	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	-40	712	-18	-702	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTAGTATTATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	74696091	74758749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.60	chr5	+	4609	16	NNC	ENSMUSG00000029227.16	novel	1969	16	NA	NA	24	-6	intron_retention	FALSE	canonical	0	0	junction_1	215.545653839016	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGCAATGAAGTTTGG	NA	False	NA	7	True	AATAAA	-16	NA	74696187	74759445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697414_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.61	chr5	+	3855	16	NNC	ENSMUSG00000029227.16	novel	1969	16	NA	NA	30	-701	intron_retention	FALSE	canonical	2	11	junction_8	213.200062539078	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAGTATTATTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	74696193	74758750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717706_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.62	chr5	+	3916	16	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	40	52	intron_retention	FALSE	canonical	3	373	junction_9	124.922482630897	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	74	True	AATAAA	-16	NA	74696203	74756858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.64	chr5	+	1906	18	NNC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	252.106667159553	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74696337	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733218_74747681_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.66	chr5	+	4053	11	ISM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	11223	6	10715	4	3prime_fragment	FALSE	canonical	3	259	junction_2	188.077670125935	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGGTCATTACCCT	NA	False	NA	17	True	AATAAA	-26	NA	74707354	74759455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.67	chr5	+	9671	6	ISM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	43352	10	-5914	0	3prime_fragment	FALSE	canonical	3	385	junction_1	154.931468720851	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74739483	74759451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.68	chr5	+	4592	5	ISM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	47709	-3	-1547	3	3prime_fragment	FALSE	canonical	3	628	junction_2	89.031946513597	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTTGTCTTGTAAT	NA	False	NA	25	True	AATAAA	-26	NA	74743850	74756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.69	chr5	+	5963	5	ISM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	48978	-2643	-278	-2	3prime_fragment	FALSE	canonical	3	628	junction_2	89.031946513597	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATGAAGTTTGGTCAT	NA	False	NA	11	True	AATAAA	-20	NA	74745119	74759449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.7	chr5	+	2071	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	-50	-52	-18	52	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAGAAAGTAATGT	NA	False	NA	74	True	AATAAA	-16	NA	74696091	74756858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.8	chr5	+	3068	17	NIC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-15	983	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	220.557452478374	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAACAGTCTCTGAGGT	NA	False	NA	NA	False	AATAAA	-22	NA	74696094	74757789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26177.9	chr5	+	2025	17	NNC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.307020205858	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGCTTTGTCTTGTAA	NA	False	NA	24	True	AATAAA	-25	NA	74696106	74756808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_74696415_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ES.26178.1	chr5	+	724	3	FSM	ENSMUSG00000085657.8	ENSMUST00000155864.3	339	3	-7	-378	-7	378	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAATTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	74863673	74874128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_74863706_74872478_74872694_74873651
ES.26179.1	chr5	-	8790	1	Antisense	novelGene_ENSMUSG00000107165.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAACTATTATTAAC	NA	False	NA	NA	False	NA	NA	NA	74745371	74736581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_74736600_74745400
ES.26179.2	chr5	-	3501	1	Intergenic	novelGene_21748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCCCCCCCCCCAAGG	NA	False	NA	NA	False	NA	NA	NA	74745371	74741870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74741900_74745400
ES.26179.3	chr5	-	3162	1	Intergenic	novelGene_21749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGAAAGAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	74745371	74742209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74742200_74745400
ES.2618.1	chr10	-	4768	1	Intergenic	novelGene_1988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAGAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	39651441	39646673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39646700_39651400
ES.26180.2	chr5	-	2687	12	NNC	ENSMUSG00000029228.16	novel	2564	11	NA	NA	-1383	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	6.31016495966483	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGTAGAGGATTTCT	NA	False	NA	0	True	AATAAA	-18	NA	74864956	74757765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452_74863571_74864829
ES.26180.3	chr5	-	201	1	Intergenic	novelGene_21750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGCTACAACAGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	74760777	74760576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74760600_74760800
ES.26180.4	chr5	-	2022	4	NNC	ENSMUSG00000029228.16	novel	2753	11	NA	NA	-1364	-73421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2836838484589	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGGGTTTTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	74864937	74831857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_74833128_74846056_74846534_74863452_74863571_74864780
ES.26181.1	chr5	-	183	1	Intergenic	novelGene_21751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	74935660	74935477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74935500_74935700
ES.26182.1	chr5	-	171	1	Intergenic	novelGene_21752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATTCTCAGCTAATA	NA	False	NA	NA	False	NA	NA	NA	74972940	74972769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_74972800_74972900
ES.26183.1	chr5	-	6510	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	162	3027	162	-3027	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTTATAACTCTTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	75205273	75161675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.10	chr5	-	2143	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	112	7444	112	5748	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTTAATTTATATAC	NA	False	NA	-3	True	ATTAAA	-14	NA	75205323	75166092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.12	chr5	-	1885	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	243	7571	-210	5621	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTGTTCCATACCAT	NA	False	NA	NA	False	NA	NA	NA	75205192	75166219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.13	chr5	-	5602	5	FSM	ENSMUSG00000029229.9	ENSMUST00000162397.3	521	5	-320	-4761	133	4761	multi-exon	FALSE	canonical	3	625	junction_3	25.9855729203726	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCAGCCTTTGTTATTTT	NA	False	NA	79	True	CATAAA	-3	NA	75205302	75167079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.14	chr5	-	1163	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	100	8436	100	4756	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGGCAGCCTTTGTT	NA	False	NA	74	True	AATACA	-15	NA	75205335	75167084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.15	chr5	-	2256	6	NNC	ENSMUSG00000029229.9	novel	521	5	NA	NA	121	4078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	268.009701316949	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATGGATTCCAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	75205314	75167762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_75169217_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.16	chr5	-	1901	6	NNC	ENSMUSG00000029229.9	novel	521	5	NA	NA	161	3763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	268.009701316949	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAAAAATGTCTTATC	NA	False	NA	NA	False	AATAAA	-6	NA	75205274	75168077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_75169217_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.2	chr5	-	6342	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	139	3218	139	-3218	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACACGGTCTGTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	75205296	75161866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.3	chr5	-	4807	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	190	4702	190	-4702	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCAAGTATTTTAATGAA	NA	False	NA	NA	False	AATATA	-19	NA	75205245	75163350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.4	chr5	-	4632	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	146	4921	146	-4921	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCCCCGTGTGTACTTA	NA	False	NA	NA	False	TTTAAA	-13	NA	75205289	75163569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.5	chr5	-	3446	5	NIC	ENSMUSG00000029229.9	novel	9699	6	NA	NA	172	-6021	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	286.912334171956	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTTGCATTAATTAT	NA	False	NA	NA	False	AATAAA	-28	NA	75205263	75164669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_75167425_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.6	chr5	-	3305	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	155	6239	155	-6239	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCAGTAGCAGTGGTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	75205280	75164887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.7	chr5	-	3183	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	139	6377	139	-6377	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTGGTATA	NA	False	NA	NA	False	AATAAA	-16	NA	75205296	75165025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.8	chr5	-	2800	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	149	6750	149	6442	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACTCCCATACTTCAT	NA	False	NA	NA	False	ATTAAA	-35	NA	75205286	75165398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26183.9	chr5	-	6585	5	FSM	ENSMUSG00000029229.9	ENSMUST00000162397.3	521	5	-314	-5750	139	5750	multi-exon	FALSE	canonical	3	625	junction_3	25.9855729203726	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	-1	True	ATTAAA	-16	NA	75205296	75166090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ES.26184.1	chr5	+	2000	2	FSM	ENSMUSG00000035946.8	ENSMUST00000040477.4	1665	2	-342	7	-342	-7	multi-exon	FALSE	canonical	3	51	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGTGGTACTTGTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	75235919	75238547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75236999_75237626
ES.26184.2	chr5	+	1478	3	NNC	ENSMUSG00000035946.8	novel	1665	2	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTCGTGGTACTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	75236253	75238543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75236523_75236706_75236999_75237626
ES.26185.1	chr5	-	178	1	Intergenic	novelGene_21753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	75268517	75268339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_75268300_75268500
ES.26186.1	chr5	+	1486	5	NNC	ENSMUSG00000107192.2	novel	1366	4	NA	NA	8	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTCTTCATCATGT	NA	False	NA	NA	False	NA	NA	NA	75270989	75307788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75271068_75271172_75271281_75288831_75288965_75300333_75300506_75306793
ES.26186.2	chr5	+	1858	7	NNC	ENSMUSG00000107192.2	novel	1366	4	NA	NA	9	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTCTTCATCATGT	NA	False	NA	NA	False	NA	NA	NA	75270990	75307788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75271068_75273874_75274130_75283161_75283295_75283398_75283492_75288831_75288965_75300333_75300506_75306793
ES.26186.3	chr5	+	579	5	NNC	ENSMUSG00000107192.2	novel	1366	4	NA	NA	9	-18801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGGCTTTTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	75270990	75288967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75271068_75271172_75271281_75283161_75283295_75283398_75283492_75288799
ES.26186.4	chr5	+	178	1	Intergenic	novelGene_21754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATTTGCATCA	NA	False	NA	NA	False	NA	NA	NA	75278468	75278646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_75278500_75278600
ES.26186.5	chr5	+	176	1	Intergenic	novelGene_21755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGAGCAAGCAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	75285892	75286068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_75285900_75286100
ES.26186.6	chr5	+	164	1	Intergenic	novelGene_21756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	75298010	75298174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_75298000_75298200
ES.26187.1	chr5	+	4473	23	FSM	ENSMUSG00000029231.16	ENSMUST00000168162.5	6834	23	12	2349	12	-2349	multi-exon	FALSE	canonical	0	0	junction_13	1.08330684434663	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGACAAGTTTGGCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	75316571	75356513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75317011_75322891_75322953_75324195_75324514_75327171_75327433_75328497_75328629_75331155_75331328_75331422_75331613_75334049_75334166_75335605_75335733_75337327_75337522_75338305_75338401_75338590_75338724_75340828_75340934_75341659_75341771_75342182_75342337_75343636_75343804_75346174_75346291_75346611_75346735_75348523_75348636_75349680_75349781_75349891_75349998_75353091_75353334_75355613
ES.26187.2	chr5	+	3141	16	ISM	ENSMUSG00000029231.16	ENSMUST00000168162.5	6834	23	13	14691	13	-7	5prime_fragment	FALSE	canonical	0	0	junction_13	0.997775303139718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGTCTTTGCTTGTTA	NA	False	NA	NA	False	NA	NA	NA	75316572	75344171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_75317011_75322891_75322953_75324195_75324514_75327171_75327433_75328497_75328629_75331155_75331328_75331422_75331613_75334049_75334166_75335605_75335733_75337327_75337522_75338305_75338401_75338590_75338724_75340828_75340934_75341659_75341771_75342182_75342337_75343636
ES.26187.3	chr5	+	6657	23	FSM	ENSMUSG00000029231.16	ENSMUST00000168162.5	6834	23	184	-7	184	7	multi-exon	FALSE	canonical	0	0	junction_13	1.08330684434663	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAAGGTCTACCACTTC	NA	False	NA	NA	False	AATAAA	-25	NA	75316743	75358869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75317011_75322891_75322953_75324195_75324514_75327171_75327433_75328497_75328629_75331155_75331328_75331422_75331613_75334049_75334166_75335605_75335733_75337327_75337522_75338305_75338401_75338590_75338724_75340828_75340934_75341659_75341771_75342182_75342337_75343636_75343804_75346174_75346291_75346611_75346735_75348523_75348636_75349680_75349781_75349891_75349998_75353091_75353334_75355613
ES.26187.4	chr5	+	4083	6	ISM	ENSMUSG00000029231.16	ENSMUST00000168162.5	6834	23	29900	1	23965	-1	3prime_fragment	FALSE	canonical	1	1	junction_3	1.01980390271856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAACGTTATGAAGGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	75346459	75358861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_75346735_75348523_75348636_75349680_75349781_75349891_75349998_75353091_75353334_75355613
ES.26187.5	chr5	+	3502	1	NIC	ENSMUSG00000029231.16	novel	6549	23	NA	NA	32863	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTAACGTTATGAAGGT	NA	False	NA	NA	False	AATAAA	-15	NA	75355357	75358859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75355400_75358900
ES.26187.6	chr5	+	3307	1	NIC	ENSMUSG00000029231.16	novel	6549	23	NA	NA	32909	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTGGTGTGGTAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	75355403	75358710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75355400_75358700
ES.26188.1	chr5	-	1149	1	Intergenic	novelGene_21757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75365571	75364422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_75364400_75365600
ES.26189.1	chr5	+	2133	4	Intergenic	novelGene_21758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTGCATAATGCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	75475068	75486518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_75475108_75475548_75475608_75483965_75484042_75484559
ES.2619.1	chr10	-	4260	1	Antisense	novelGene_ENSMUSG00000019841.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATGGGGAAAAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	39671534	39667274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_39667300_39671500
ES.26190.1	chr5	+	5743	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	-501	-28	-462	28	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTATTCACTCAATCAG	265	False	NA	42	True	TTTAAA	-4	NA	75735113	75817410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.10	chr5	+	5167	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	293.837416780096	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	775	False	NA	9	True	NA	NA	NA	75735623	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806516_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.100	chr5	+	6055	18	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	231	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	348.554682628145	1593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	NA	False	NA	18	True	NA	NA	NA	75771464	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75771604_75775978_75776154_75781506_75783251_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.101	chr5	+	4309	18	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	307	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	349.841328343724	1593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	NA	False	NA	9	True	NA	NA	NA	75771540	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801246_75801451_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.103	chr5	+	3944	15	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	12413	1	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_9	327.940201119357	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATGTAAATATATA	NA	False	NA	-13	True	NA	NA	NA	75783646	75817355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809058_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.104	chr5	+	3390	11	NNC	ENSMUSG00000005672.13	novel	842	6	NA	NA	-468	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	382.12067465658	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	NA	False	NA	18	True	NA	NA	NA	75801274	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75801327_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.105	chr5	+	4994	8	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	244	4	intron_retention	FALSE	canonical	3	1066	junction_7	86.8146042449315	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	NA	False	NA	18	True	NA	NA	NA	75801986	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75802098_75806495_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.106	chr5	+	3271	1	FSM	ENSMUSG00000005672.13	ENSMUST00000201240.2	3104	1	-146	-21	-47	21	mono-exon	FALSE	NA	NA	NA	NA	NA	1495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	75809706	75812977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75809700_75813000
ES.26190.107	chr5	+	2414	2	ISM	ENSMUSG00000005672.13	ENSMUST00000202167.2	3175	5	4124	-25	4025	-3	3prime_fragment	FALSE	canonical	3	1066	junction_1	0	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	NA	False	NA	11	True	NA	NA	NA	75813877	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_75813986_75815073
ES.26190.11	chr5	+	5165	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.305356478312	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	775	False	NA	18	True	NA	NA	NA	75735623	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767717_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.12	chr5	+	7433	19	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	9	4	intron_retention	FALSE	canonical	3	795	junction_8	137.772356524167	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	775	False	NA	18	True	NA	NA	NA	75735623	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.14	chr5	+	5582	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	14	4	intron_retention	FALSE	non_canonical	0	0	junction_10	381.262626020438	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	780	False	NA	18	True	NA	NA	NA	75735628	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75799914_75800009_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.15	chr5	+	4896	20	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	31	4	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	373.201541505012	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	797	False	NA	18	True	NA	NA	NA	75735645	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775984_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.18	chr5	+	5242	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	387.80421606785	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	802	False	NA	11	True	NA	NA	NA	75735650	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776150_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75814990
ES.26190.2	chr5	+	5258	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	11	-28	11	28	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTATTCACTCAATCAG	738	False	NA	42	True	TTTAAA	-4	NA	75735586	75817410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.21	chr5	+	1563	4	ISM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	39	45033	39	-9260	5prime_fragment	FALSE	canonical	3	1215	junction_3	73.8707580094376	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCATCTCTTTTTCTTC	805	False	NA	NA	False	AATAAA	-19	NA	75735653	75772349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466
ES.26190.22	chr5	+	5255	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	-3	intron_retention	FALSE	canonical	3	795	junction_9	135.357759259267	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	805	False	NA	11	True	NA	NA	NA	75735653	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813517_75813879_75813986_75815073
ES.26190.24	chr5	+	4790	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	805	False	NA	18	True	NA	NA	NA	75735653	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75815564_75815940
ES.26190.26	chr5	+	4896	19	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	308.960887891839	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	805	False	NA	18	True	NA	NA	NA	75735653	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801463_75806527_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.28	chr5	+	5173	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_4	312.280963236634	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	805	False	NA	18	True	NA	NA	NA	75735653	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775984_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.29	chr5	+	5053	20	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	408.972376123538	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	805	False	NA	18	True	NA	NA	NA	75735653	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808260_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.3	chr5	+	5193	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	294.545819865093	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	773	False	NA	18	True	NA	NA	NA	75735621	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781512_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.32	chr5	+	4810	20	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	388.335648862276	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATATAAATCAAATAAA	806	False	NA	-2	True	NA	NA	NA	75735654	75817366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75769929_75770176_75771493_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.33	chr5	+	5052	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	291.163165458249	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	806	False	NA	11	True	NA	NA	NA	75735654	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.36	chr5	+	4893	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	295.923513364134	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.37	chr5	+	5211	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	330.658324407537	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	806	False	NA	9	True	NA	NA	NA	75735654	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801528_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.39	chr5	+	6678	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	-3	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_14	291.711655577901	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	806	False	NA	11	True	NA	NA	NA	75735654	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75806888_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.4	chr5	+	5487	20	NIC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	8	-3	intron_retention	FALSE	canonical	3	392	junction_9	209.587564918392	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	774	False	NA	11	True	NA	NA	NA	75735622	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.40	chr5	+	1473	6	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	-4477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	513.073250131012	1377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCGTCCAATCCCTCA	806	False	NA	NA	False	AATAAA	-14	NA	75735654	75777132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75776650
ES.26190.41	chr5	+	5163	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	330.658324407537	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	806	False	NA	9	True	NA	NA	NA	75735654	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801480_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.45	chr5	+	5232	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	374.432413998923	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75806888_75806955_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.47	chr5	+	5716	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	intron_retention	FALSE	canonical	3	795	junction_9	132.655803969784	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.49	chr5	+	5160	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_4	274.538754094937	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775984_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.5	chr5	+	3868	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	47	1326	8	-1298	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGGTTGTGGTTGT	774	False	NA	NA	False	AATAGA	-36	NA	75735622	75816056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.54	chr5	+	5048	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	806	False	NA	9	True	NA	NA	NA	75735654	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75817241_75817349
ES.26190.56	chr5	+	4792	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAATAAATTTTTCTG	806	False	NA	6	True	NA	NA	NA	75735654	75817374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75815654_75816015
ES.26190.6	chr5	+	4385	18	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	8	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	353.379326074525	1502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAAGTTG	774	False	NA	NA	False	NA	NA	NA	75735622	75812977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75811171
ES.26190.61	chr5	+	5272	22	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	40	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	372.075809699133	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75799914_75800009_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.62	chr5	+	5104	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75817088_75817149
ES.26190.63	chr5	+	4968	19	NIC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	40	28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	298.895538959478	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTATTCACTCAATCAG	806	False	NA	42	True	TTTAAA	-4	NA	75735654	75817410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.66	chr5	+	6722	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	40	4	intron_retention	FALSE	canonical	3	795	junction_8	130.587125054183	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	806	False	NA	18	True	NA	NA	NA	75735654	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.7	chr5	+	5500	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	8	22	intron_retention	FALSE	canonical	3	795	junction_9	134.334060793221	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTACATTTATTCACTC	774	False	NA	36	True	NA	NA	NA	75735622	75817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.72	chr5	+	5248	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	41	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	372.502732492375	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	807	False	NA	18	True	NA	NA	NA	75735655	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75800577_75800661_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.75	chr5	+	5164	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	41	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	294.690731954705	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTTATTCACTCAATC	807	False	NA	40	True	TTTAAA	-2	NA	75735655	75817408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813963_75815073
ES.26190.77	chr5	+	5036	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	41	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	807	False	NA	18	True	NA	NA	NA	75735655	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75816645_75816773
ES.26190.78	chr5	+	5156	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	406.949259736395	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	809	False	NA	11	True	NA	NA	NA	75735657	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735771_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776150_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.80	chr5	+	5158	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	328.898099720871	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	812	False	NA	11	True	NA	NA	NA	75735660	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802091_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.82	chr5	+	5317	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	330.658324407537	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATTTTTCTGTTTGT	812	False	NA	11	True	NA	NA	NA	75735660	75817379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801638_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.85	chr5	+	4926	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	812	False	NA	18	True	NA	NA	NA	75735660	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75815690_75815923
ES.26190.86	chr5	+	5161	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	329.258864725006	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	812	False	NA	18	True	NA	NA	NA	75735660	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813311_75813416_75813517_75813879_75813986_75815073
ES.26190.87	chr5	+	5143	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.305356478312	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATTTTTCTGTTTGTT	812	False	NA	12	True	NA	NA	NA	75735660	75817380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767696_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.88	chr5	+	3999	15	NIC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	46	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	382.180478788945	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	812	False	NA	18	True	NA	NA	NA	75735660	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_75735779_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.89	chr5	+	5302	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	363.833488365538	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	812	False	NA	18	True	NA	NA	NA	75735660	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75764144_75764287_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.9	chr5	+	5288	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	372.360357486756	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTCTGTTTGTTTTT	775	False	NA	15	True	NA	NA	NA	75735623	75817383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75799914_75800009_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.90	chr5	+	5134	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	295.25065622281	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	812	False	NA	18	True	NA	NA	NA	75735660	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801492_75801801_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.93	chr5	+	4876	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	52	22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	288.228792341594	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTACATTTATTCACTC	818	False	NA	36	True	NA	NA	NA	75735666	75817404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073_75815475_75815770
ES.26190.94	chr5	+	5130	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	60	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	293.837416780096	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAAATTTTTCTGTTT	826	False	NA	9	True	NA	NA	NA	75735674	75817377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802091_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.96	chr5	+	5311	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	69	-1309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	383.614503766477	1570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTTAAATGTTTTTTG	835	False	NA	NA	False	AATAGA	-25	NA	75735683	75816045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776150_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75806888_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.98	chr5	+	5288	22	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	72	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	388.616092204352	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	838	False	NA	18	True	NA	NA	NA	75735686	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75764144_75764287_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26190.99	chr5	+	5206	22	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	72	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	378.226137830093	1594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTTTGTTTTTTAA	838	False	NA	18	True	NA	NA	NA	75735686	75817386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75791466_75791539_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ES.26191.1	chr5	-	4548	1	Intergenic	novelGene_21759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCGCATATGGCATTGTG	NA	False	NA	NA	False	NA	NA	NA	75748335	75743787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_75743800_75748300
ES.26192.1	chr5	-	2685	1	Intergenic	novelGene_21760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAATCCCTGCAA	NA	False	NA	NA	False	NA	NA	NA	75764886	75762201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_75762200_75764900
ES.26193.1	chr5	-	5547	1	Intergenic	novelGene_21761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGACTG	NA	False	NA	NA	False	NA	NA	NA	75793606	75788059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_75788100_75793600
ES.26194.1	chr5	-	2107	1	Antisense	novelGene_ENSMUSG00000005672.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAAAAAAACCCGGCA	NA	False	NA	NA	False	TTTAAA	-28	NA	75800811	75798704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_75798700_75800800
ES.26195.1	chr5	+	1530	2	Genic_Genomic	ENSMUSG00002075712.1	novel	101	1	NA	NA	33	3603	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTATTTTTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	76070519	76074190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_76070638_76072778
ES.26196.1	chr5	-	5962	30	FSM	ENSMUSG00000062960.11	ENSMUST00000113516.2	5924	30	-39	1	-39	-1	multi-exon	FALSE	canonical	0	0	junction_5	1.13216932133669	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGTTATCATCTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	76139157	76093487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76095279_76096954_76097041_76097498_76097599_76102469_76102622_76104094_76104201_76104584_76104685_76104930_76105043_76105182_76105306_76107478_76107577_76109410_76109565_76110174_76110264_76110768_76110883_76112473_76112579_76112931_76113068_76113499_76113607_76116813_76116946_76117623_76117771_76119776_76120119_76121369_76121479_76122393_76122506_76123369_76123527_76125234_76125399_76125484_76125600_76127006_76127185_76128331_76128472_76128980_76129150_76129390_76129522_76132912_76133116_76135061_76135156_76138761
ES.26197.1	chr5	-	1767	1	FSM	ENSMUSG00000107020.2	ENSMUST00000201529.2	352	1	-904	-511	-904	511	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAACATTTGTGTCA	8974	False	NA	NA	False	AATAAA	-16	NA	76222327	76220560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76220600_76222300
ES.26198.1	chr5	-	184	1	Intergenic	novelGene_21762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8074	False	NA	NA	False	NA	NA	NA	76265922	76265738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_76265700_76265900
ES.26199.1	chr5	+	1779	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	-11	-21	-11	-4	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGCAGTCTCTCTCT	NA	False	NA	36	True	NA	NA	NA	76288106	76303347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.26199.2	chr5	+	5253	6	NNC	ENSMUSG00000029233.16	novel	1747	6	NA	NA	-14	-12	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	22.3839228018683	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATACAGCACGCCCTGG	NA	False	NA	3	True	AATAAA	-15	NA	76288138	76303314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297818_76297851_76301506_76302369
ES.26199.3	chr5	+	1475	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	35	237	0	-2	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATAATATGAATGTAC	NA	False	NA	NA	False	AATAAA	-30	NA	76288152	76303089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.26199.4	chr5	+	1600	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	67	80	32	-80	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGATGGAATTCTCTT	NA	False	NA	-65	True	NA	NA	NA	76288184	76303246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.26199.5	chr5	+	1781	6	NIC	ENSMUSG00000029233.16	novel	628	4	NA	NA	-40	-12	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	20.4019606900906	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATACAGCACGCCCTGG	NA	False	NA	3	True	AATAAA	-15	NA	76288506	76303314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76288831_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.26199.6	chr5	+	1510	6	NIC	ENSMUSG00000029233.16	novel	628	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	20.4019606900906	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATATGAATGTACAG	NA	False	NA	NA	False	AATAAA	-32	NA	76288554	76303091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76288831_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.26199.7	chr5	+	1379	5	NNC	ENSMUSG00000029233.16	novel	1872	2	NA	NA	-341	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4560759719097	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATACAGCACGCCCTG	NA	False	NA	2	True	AATAAA	-14	NA	76295466	76303313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76295533_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ES.262.1	chr1	-	1931	2	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATTAAAATAGAATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	36040873	36037844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36039657_36040754
ES.262.2	chr1	-	302	2	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCACTGTTGGTGAGGG	NA	False	NA	NA	False	AATATA	-26	NA	36040877	36039477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36039657_36040754
ES.262.3	chr1	-	2090	3	FSM	ENSMUSG00000103708.2	ENSMUST00000193725.2	654	3	-162	-1274	-162	1274	multi-exon	FALSE	canonical	1	1	junction_2	3	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATCTAGGTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	36050287	36040791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36042488_36042894_36043073_36050071
ES.2620.1	chr10	-	226	1	Intergenic	novelGene_1989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AAGAAA	-27	NA	39676793	39676567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39676600_39676800
ES.26200.1	chr5	+	1910	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	12	-25	12	25	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTTATGATTTCTT	548	False	NA	32	True	AATAAA	-40	NA	76331738	76357117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ES.26200.10	chr5	+	5358	4	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	8	junction_2	505.312004826941	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	577	False	NA	7	True	AATAAA	-15	NA	76331767	76357092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76347418_76352038_76352130_76352483
ES.26200.11	chr5	+	4752	6	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-28	-1	intron_retention	FALSE	canonical	2	17	junction_4	460.786978982696	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	578	False	NA	6	True	AATAAA	-14	NA	76331768	76357091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352527_76352613_76355755_76356356
ES.26200.12	chr5	+	5871	5	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-28	-2	intron_retention	FALSE	canonical	0	0	junction_2	498.912066400483	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCGTTTTCCTCGTGTGT	578	False	NA	5	True	AATAAA	-13	NA	76331768	76357090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76348451_76351953_76352130_76352483_76355755_76356356
ES.26200.13	chr5	+	1021	3	NNC	ENSMUSG00000029234.14	novel	462	2	NA	NA	-28	321	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.5	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATTTGTACAGTGTG	578	False	NA	NA	False	AATAAA	-11	NA	76331768	76345155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76344259_76344470_76344775
ES.26200.14	chr5	+	1272	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	53	572	-17	-572	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTAGCATTGATTTG	589	False	NA	NA	False	ACTAAA	-18	NA	76331779	76356520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ES.26200.15	chr5	+	5427	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	56	1	-14	-1	intron_retention	FALSE	canonical	3	1062	junction_3	59.9462722406953	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	592	False	NA	6	True	AATAAA	-14	NA	76331782	76357091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483
ES.26200.17	chr5	+	1457	2	FSM	ENSMUSG00000029234.14	ENSMUST00000136424.2	462	2	-10	-985	-10	985	multi-exon	FALSE	canonical	3	5	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACTGTTTTATGCCTTG	596	False	NA	NA	False	NA	NA	NA	76331786	76345819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76344775
ES.26200.18	chr5	+	1884	2	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	60	8430	-10	3828	5prime_fragment	FALSE	canonical	3	1097	junction_1	0	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAGTCAAAACTG	596	False	NA	NA	False	NA	NA	NA	76331786	76348662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_76332200_76347191
ES.26200.19	chr5	+	5512	1	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-387	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	NA	False	NA	6	True	AATAAA	-14	NA	76351579	76357091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76351600_76357100
ES.26200.2	chr5	+	3661	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	27	-1791	27	1791	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAAAAGTCATTTCTT	563	False	NA	NA	False	AATAAA	-28	NA	76331753	76358883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ES.26200.20	chr5	+	1197	4	ISM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	20226	2	-14	-2	3prime_fragment	FALSE	canonical	3	1062	junction_1	85.1756355355737	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCGTTTTCCTCGTGTGT	NA	False	NA	5	True	AATAAA	-13	NA	76351952	76357090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_76352130_76352483_76352664_76355648_76355755_76356356
ES.26200.3	chr5	+	4768	5	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	28	-1	intron_retention	FALSE	canonical	3	8	junction_2	495.486881763786	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	564	False	NA	6	True	AATAAA	-14	NA	76331754	76357091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76347418_76352038_76352130_76352483_76355755_76356356
ES.26200.4	chr5	+	4854	5	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	28	0	intron_retention	FALSE	canonical	3	1062	junction_3	79.2665597840603	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	564	False	NA	7	True	AATAAA	-15	NA	76331754	76357092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76355755_76356356
ES.26200.5	chr5	+	1732	2	FSM	ENSMUSG00000029234.14	ENSMUST00000136424.2	462	2	-42	-1228	28	1228	multi-exon	FALSE	canonical	3	5	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATAAGGAAAGCCAC	564	False	NA	NA	False	AATAAA	-17	NA	76331754	76346062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76344775
ES.26200.6	chr5	+	1459	5	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	488.032017392302	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTTCCTCGTGTGTT	569	False	NA	6	True	AATAAA	-14	NA	76331759	76357091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352653_76356643
ES.26200.7	chr5	+	1765	7	NNC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	434.524900194326	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTACTCGTTTTCCTCGTGT	577	False	NA	3	True	AATAAA	-11	NA	76331767	76357088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352527_76352613_76352664_76355648_76355755_76356356
ES.26200.8	chr5	+	1390	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	41	466	-29	-466	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTTCTCTCTAGCTT	577	False	NA	NA	False	AAAAAG	-14	NA	76331767	76356626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ES.26201.1	chr5	+	4748	4	Antisense	novelGene_ENSMUSG00000029238.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-25	NA	76361613	76379149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_76364726_76374779_76375077_76377206_76377408_76378011
ES.26202.1	chr5	+	161	1	Intergenic	novelGene_21763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAATTTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	76415902	76416063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_76415900_76416100
ES.26203.1	chr5	+	627	1	Intergenic	novelGene_21764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTATGAAGGAAAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	76436285	76436912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_76436300_76436900
ES.26204.1	chr5	-	9732	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.9323160069308	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATTTTCCTTTCTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	76452343	76357714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.10	chr5	-	7720	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	47	1977	9	332	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTAGTTGGTGATT	NA	False	NA	NA	False	AATAAA	-23	NA	76452592	76359691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.11	chr5	-	10734	23	NNC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	67	329	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	14.1226182808797	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACATTGTGTAGTTGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	76452328	76359694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379731_76380953_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.12	chr5	-	7543	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	-68	3	-68	-3	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	0	True	ATTAAA	-20	NA	76452463	76360026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.13	chr5	-	7306	22	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	57	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	16.591121303952	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	0	True	ATTAAA	-20	NA	76452338	76360026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.14	chr5	-	7379	23	NNC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.8873227698498	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	0	True	ATTAAA	-20	NA	76452328	76360026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383623_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452232
ES.26204.15	chr5	-	7298	22	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	70	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	16.1579505222465	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	0	True	ATTAAA	-20	NA	76452325	76360026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76451270_76451350_76452214
ES.26204.16	chr5	-	7471	23	NNC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	706	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	13.2656425674474	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGCATATTTTTTCC	NA	False	NA	0	True	ATTAAA	-20	NA	76451689	76360026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76451512
ES.26204.17	chr5	-	7416	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.4989219760624	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTGCATATTTTTTC	NA	False	NA	-1	True	ATTAAA	-19	NA	76452627	76360027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.19	chr5	-	7372	22	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	11	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	14.2370600037726	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTTGCATATTTTTT	NA	False	NA	-2	True	ATTAAA	-18	NA	76452384	76360028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.21	chr5	-	7423	23	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	24	-6	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	14.6307160193775	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTGCATATTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	76452371	76360029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.22	chr5	-	7742	25	Fusion	ENSMUSG00000029235.15_ENSMUSG00000029238.12	novel	9744	23	NA	NA	21	-6	multi-exon	FALSE	canonical	0	0	junction_20	24.4122222917583	213	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTGCATATTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	76478959	76360029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76434712_76434882_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ES.26204.23	chr5	-	7571	24	NNC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	67	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	16.4935686612499	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTGCATATTTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	76452328	76360029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76434712_76434882_76451270_76451350_76452214
ES.26204.24	chr5	-	7522	22	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-190	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_16	14.2606128677936	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTTTTGCATATTT	NA	False	NA	-5	True	ATTAAA	-15	NA	76452829	76360031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.25	chr5	-	7352	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	12	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	14.309809962296	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTTTTGCATATTT	NA	False	NA	-5	True	ATTAAA	-15	NA	76452589	76360031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.26	chr5	-	7681	24	NNC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-179	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	15.9004464276118	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTTTTGCATATTT	NA	False	NA	-5	True	ATTAAA	-15	NA	76452818	76360031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76416619_76416695_76421805_76421891_76451270_76451350_76452501
ES.26204.28	chr5	-	7568	24	NNC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	15.731081295148	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACTGTTTTGCATATT	NA	False	NA	-6	True	ATTAAA	-14	NA	76452612	76360032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76434712_76434882_76451270_76451350_76452501
ES.26204.29	chr5	-	6639	5	ISM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	71902	10	41366	-10	3prime_fragment	FALSE	canonical	3	31	junction_3	12.5573683548744	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGTTTTGCATAT	NA	False	NA	-7	True	ATTAAA	-13	NA	76380493	76360033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242
ES.26204.3	chr5	-	9966	23	NNC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-225	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	13.8376806206343	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACATTTTCCTTTCTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	76452864	76357715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413785_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.30	chr5	-	6133	23	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	88	422	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.9323160069308	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACATTTGTGTAAAAGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	76452307	76361277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.31	chr5	-	5405	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	25	2048	25	-372	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACACTTCTCAGC	NA	False	NA	NA	False	NA	NA	NA	76452370	76362071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.32	chr5	-	4355	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	87	5302	49	-1317	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATTTTAAAAGGCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	76452552	76363016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.33	chr5	-	4391	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	91	2996	91	-1320	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATACATTTTAAAAGGCA	NA	False	NA	NA	False	AATAAA	-13	NA	76452304	76363019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.34	chr5	-	4323	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	38	3117	38	-1441	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGACAAGTTGTCTTTAA	NA	False	NA	NA	False	AGTAAA	-16	NA	76452357	76363140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.35	chr5	-	5757	18	NNC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	52	3232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.6948193681643	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGGGTAAAAACTGAA	NA	False	NA	NA	False	AGTAAA	-45	NA	76452343	76379731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414738_76421805_76421891_76451270_76451350_76452214
ES.26204.37	chr5	-	5605	17	NNC	ENSMUSG00000029238.12	novel	5508	21	NA	NA	-11	3232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	19.3970640497473	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGGGTAAAAACTGAA	NA	False	NA	NA	False	AGTAAA	-45	NA	76421870	76379731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414266_76414646_76414737_76416619_76416695_76421805
ES.26204.38	chr5	-	5723	18	ISM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	15	22044	-5	3205	5prime_fragment	FALSE	canonical	3	23	junction_17	9.94135050317559	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	76452624	76379758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.39	chr5	-	3268	18	ISM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	-229	24743	-229	506	5prime_fragment	FALSE	canonical	3	23	junction_17	9.94135050317559	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTCTCTGCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	76452868	76382457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.4	chr5	-	8829	23	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	-187	-1077	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	14.309809962296	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	76452826	76358791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.40	chr5	-	2531	18	ISM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	58	22927	58	13	5prime_fragment	FALSE	canonical	3	18	junction_17	10.5983611712175	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAAGGTGTTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	76452337	76382950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.41	chr5	-	2065	18	ISM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	18	25699	-2	-450	5prime_fragment	FALSE	canonical	3	23	junction_17	9.94135050317559	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTTGCTTACTGTGCT	NA	False	NA	NA	False	GATAAA	-13	NA	76452621	76383413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.42	chr5	-	1248	12	ISM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	88	33095	50	-7846	5prime_fragment	FALSE	canonical	3	23	junction_11	9.72429861075206	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGAATGTTGTCTGTA	NA	False	NA	NA	False	AATAAA	-10	NA	76452551	76390809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.43	chr5	-	3709	1	NIC	ENSMUSG00000029238.12	novel	9744	23	NA	NA	6674	8324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGCAGCAGCAACAAC	NA	False	NA	NA	False	NA	NA	NA	76415185	76411476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76411500_76415200
ES.26204.44	chr5	-	2849	5	NIC	ENSMUSG00000029238.12	novel	1889	8	NA	NA	-226	8270	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	12.4373429638327	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76452865	76411530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76413787_76414203_76414264_76414646_76414737_76451270_76451350_76452501
ES.26204.45	chr5	-	1077	4	NNC	ENSMUSG00000029238.12	novel	2287	3	NA	NA	-313	2861	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	14.2361043360417	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGTCTGTATACTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	76452952	76416939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76417402_76421805_76421891_76451270_76451350_76452501
ES.26204.46	chr5	-	1167	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	24	-10	1	-2	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGTGTGTATAGGTGT	NA	False	NA	NA	False	AATAAA	-41	NA	76478979	76459963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ES.26204.47	chr5	-	1138	7	NNC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	71	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	39.9082280572148	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTAAGACATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76478909	76459992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76460446_76465377_76465448_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ES.26204.48	chr5	-	749	4	NIC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	37	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.5192267069642	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTAAGACATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76478943	76459992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76460446_76472152_76472244_76472839_76472961_76478859
ES.26204.49	chr5	-	987	6	NNC	ENSMUSG00000029235.15	novel	1181	6	NA	NA	13	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.3774134775231	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATTAAGACATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76478967	76459992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_76460446_76465377_76465448_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ES.26204.5	chr5	-	8664	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	46	-1232	46	-1077	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	76452349	76358791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26204.50	chr5	-	857	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	31	293	8	-293	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCGAATGCCTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	76478972	76460266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ES.26204.6	chr5	-	8556	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	88	1100	50	-1100	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	76452551	76358814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ES.26204.8	chr5	-	3369	1	ISM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	89817	1739	59037	570	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATAGTGTCACTTGTTG	967	False	NA	NA	False	ATTAAA	-23	NA	76362822	76359453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_76359500_76362800
ES.26204.9	chr5	-	7782	23	NIC	ENSMUSG00000029238.12	novel	7478	23	NA	NA	25	332	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	11.9323160069308	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTAGTTGGTGATT	NA	False	NA	NA	False	AATAAA	-23	NA	76452370	76359691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_76364726_76374779_76375075_76377204_76377408_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ES.26205.1	chr5	-	175	1	Intergenic	novelGene_21765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	76551260	76551085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_76551100_76551300
ES.26206.1	chr5	-	176	1	Intergenic	novelGene_21766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGACAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	76553823	76553647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_76553600_76553800
ES.26207.1	chr5	+	3328	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	-48	-8	-1	1	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTTAAGCCTTATAA	NA	False	NA	18	True	AATAAA	-28	NA	76677156	76718142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.10	chr5	+	3313	20	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.211001491571	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGATATTTGATAAT	NA	False	NA	1	True	AATAAA	-11	NA	76677175	76718125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76695212_76695263_76697372_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.11	chr5	+	3315	18	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.8624417359424	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677175	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685710_76689886_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.12	chr5	+	6947	18	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_9	48.8370640347002	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677175	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697439_76701946_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.13	chr5	+	3192	17	NIC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	55.1868629634807	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGATAATATTCTTAA	NA	False	NA	9	True	AATAAA	-19	NA	76677175	76718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.15	chr5	+	8093	17	NIC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	5	0	intron_retention	FALSE	canonical	3	149	junction_12	18.5134030839822	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677179	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.16	chr5	+	3350	19	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.1422912139971	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATATTTGATAATATTCT	NA	False	NA	6	True	AATAAA	-16	NA	76677183	76718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685710_76689886_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.17	chr5	+	6024	14	NIC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	-5	0	intron_retention	FALSE	canonical	3	47	junction_10	39.7712393481765	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677199	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76709368_76711076_76711261_76714803_76716009_76717464
ES.26207.18	chr5	+	3346	19	NIC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	51.1275637770643	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGATAATATTCTTAA	NA	False	NA	9	True	AATAAA	-19	NA	76677204	76718133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714773_76715004_76715813_76716009_76717464
ES.26207.19	chr5	+	3357	19	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	49.9421888008748	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTTAAGCCTTATAA	NA	False	NA	18	True	AATAAA	-28	NA	76677205	76718142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685738_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.2	chr5	+	3444	19	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	60.3365305066528	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAGCCTTATAAAT	NA	False	NA	20	True	AATAAA	-30	NA	76677156	76718144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685738_76689897_76690086_76691301_76691530_76691724_76691858_76693064_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.20	chr5	+	3646	22	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.4415147618949	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATATTTGATAATATTCT	NA	False	NA	6	True	AATAAA	-16	NA	76677205	76718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76695212_76695263_76697083_76697169_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76716731_76716931_76717464
ES.26207.21	chr5	+	7482	18	NNC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.1222340507096	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATATTCTTAAGCCTTA	NA	False	NA	15	True	AATAAA	-25	NA	76677205	76718139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697372_76700939_76701156_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.23	chr5	+	2910	17	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	3495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.8228861700093	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	3399	False	NA	8	True	AATAAA	-18	NA	76680699	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711078_76711261_76715813_76716009_76717464
ES.26207.24	chr5	+	6314	1	FSM	ENSMUSG00000036435.14	ENSMUST00000202151.2	2990	1	-5651	2327	5051	-2327	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAAGCTAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	76694841	76701155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76694800_76701200
ES.26207.25	chr5	+	1653	2	Genic_Genomic	ENSMUSG00000036435.14	novel	2990	1	NA	NA	-834	-1953	multi-exon	FALSE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTCATGAGAAACTCCC	NA	False	NA	NA	False	NA	NA	NA	76699658	76701529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_76700939_76701156
ES.26207.26	chr5	+	8045	5	NIC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	2124	38	intron_retention	FALSE	canonical	3	164	junction_3	12.1757956618859	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTACAGAATCTGCA	NA	False	NA	55	True	TATAAA	-17	NA	76702616	76718179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.27	chr5	+	8598	4	NIC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	2342	-1	intron_retention	FALSE	canonical	3	167	junction_2	12.1928941054479	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATTCTTAAGCCTTAT	NA	False	NA	16	True	AATAAA	-26	NA	76702834	76718140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76709368_76711076_76711261_76714803_76716009_76717464
ES.26207.28	chr5	+	5641	6	NNC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	3579	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	69.8587145601749	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTGATAATATTCTT	NA	False	NA	7	True	AATAAA	-17	NA	76704071	76718131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76708254_76709138_76709368_76711076_76711261_76714803_76714958_76715783_76716009_76717464
ES.26207.29	chr5	+	4735	9	NNC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	3694	38	intron_retention	FALSE	canonical	0	0	junction_7	71.8339012931916	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTTACAGAATCTGCA	NA	False	NA	55	True	TATAAA	-17	NA	76704186	76718179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76716731_76716931_76717464
ES.26207.3	chr5	+	3728	18	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	-1	5	intron_retention	FALSE	canonical	0	0	junction_16	52.5754689070468	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAGCCTTATAAATCT	NA	False	NA	22	True	AATAAA	-32	NA	76677156	76718146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715160_76715813_76716009_76717464
ES.26207.4	chr5	+	3375	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	-1	-3	-1	3	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAGCCTTATAAAT	NA	False	NA	20	True	AATAAA	-30	NA	76677156	76718144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.5	chr5	+	8728	14	NIC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	0	5	intron_retention	FALSE	canonical	0	0	junction_12	55.8892607524525	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAGCCTTATAAATCT	NA	False	NA	22	True	AATAAA	-32	NA	76677157	76718146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76705711_76706850_76709368_76711076_76711261_76715813_76716009_76717464
ES.26207.6	chr5	+	6983	18	NIC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	3	2	intron_retention	FALSE	canonical	3	89	junction_10	27.6889544889662	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCTTAAGCCTTATAAA	NA	False	NA	19	True	AATAAA	-29	NA	76677160	76718143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.7	chr5	+	3281	19	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	49.784969718546	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATATTCTTAAGCCTT	NA	False	NA	14	True	AATAAA	-24	NA	76677170	76718138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697372_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.8	chr5	+	3235	18	NNC	ENSMUSG00000036435.14	novel	3272	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	52.47579768389	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTTAAGCCTTATAA	NA	False	NA	18	True	AATAAA	-28	NA	76677175	76718142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697372_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ES.26207.9	chr5	+	7878	12	NNC	ENSMUSG00000036435.14	novel	3371	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_7	64.5784806672413	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGATAATATTCTTA	NA	False	NA	8	True	AATAAA	-18	NA	76677175	76718132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691858_76693100_76693211_76697372_76697449_76701946_76702053_76706850_76711261_76714803_76716009_76717464
ES.26208.1	chr5	+	5868	27	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	-53	529	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	10.86992757307	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTTCTCTTTCTTTCC	NA	False	NA	3	True	AATAAA	-13	NA	76736491	76794842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780009_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478_76794548_76794797
ES.26208.10	chr5	+	5195	26	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	-1	-572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	8.92331776863292	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATGCATCTGATAATAC	NA	False	NA	NA	False	AGTAAA	-27	NA	76736543	76793740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792251
ES.26208.13	chr5	+	3775	21	NNC	ENSMUSG00000036403.16	novel	5629	24	NA	NA	1	-10072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.84010746541014	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAGTTCAGTTAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	76736545	76782683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76744999_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998
ES.26208.19	chr5	+	5883	27	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	73	665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	8.80021516681544	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGGAATATCTTTCTT	NA	False	NA	NA	False	AATAAA	-36	NA	76736620	76794978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478_76794537_76794782
ES.26208.20	chr5	+	4512	19	NNC	ENSMUSG00000036403.16	novel	5313	25	NA	NA	15006	533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	10.137937550497	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCTTTCTTTCCAACA	NA	False	NA	7	True	AATAAA	-17	NA	76754566	76794846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478_76794541_76794788
ES.26208.21	chr5	+	2822	7	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	42495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5419776094665	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGAAGGTCTTGTAGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	76782055	76794313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76787607_76787834_76788728_76788843_76792478
ES.26208.22	chr5	+	1385	6	NNC	ENSMUSG00000036403.16	novel	5313	25	NA	NA	44898	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.7888857695425	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACTGTGAATTGCTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	76784458	76792755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76784919_76785910_76786114_76786768_76786874_76787607_76787834_76788728_76788843_76792478
ES.26208.23	chr5	+	2698	5	NNC	ENSMUSG00000036403.16	novel	5313	25	NA	NA	46422	532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.7887585695009	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTCTTTCTTTCCAAC	NA	False	NA	6	True	AATAAA	-16	NA	76785982	76794845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76786114_76786768_76786874_76788728_76788843_76792251_76794537_76794782
ES.26208.3	chr5	+	5857	27	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	-29	534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	8.80021516681544	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTTTCTTTCCAACAT	NA	False	NA	8	True	AATAAA	-18	NA	76736515	76794847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478_76794537_76794782
ES.26208.4	chr5	+	5844	27	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	-26	530	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	10.3149371783876	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTCTCTTTCTTTCCA	NA	False	NA	4	True	AATAAA	-14	NA	76736518	76794843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754572_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478_76794542_76794789
ES.26208.5	chr5	+	4720	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-17	834	-14	724	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTATCGCCGTGTGTGAT	NA	False	NA	NA	False	AATAAA	-29	NA	76736530	76793479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ES.26208.6	chr5	+	5792	26	NNC	ENSMUSG00000036403.16	novel	5537	26	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.45940896280585	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCGGAAGGTCTTGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	76736532	76794310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786357_76786768_76786874_76788728_76788843_76792478
ES.26208.7	chr5	+	3992	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-15	1560	-12	-2	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATACTGTGAATTGCT	NA	False	NA	NA	False	ACTAAA	-17	NA	76736532	76792753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ES.26208.8	chr5	+	5190	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-12	359	-9	-358	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGTACCAACTGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	76736535	76793954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ES.26208.9	chr5	+	5543	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	-6	0	-3	0	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGAAGGTCTTGTAGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	76736541	76794313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ES.26209.1	chr5	-	243	1	Intergenic	novelGene_21767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTTAAACAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	76794785	76794542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_76794500_76794800
ES.2621.1	chr10	-	5359	2	Antisense	novelGene_ENSMUSG00000019841.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39700666	39694792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_39696586_39697100
ES.26210.1	chr5	+	7024	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	-20	106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2659863237109	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	AATAAA	-25	NA	76805509	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.10	chr5	+	4455	12	NNC	ENSMUSG00000036377.20	novel	583	4	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.36486464060395	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTATTGCCTGGCTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	76805546	77016260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76805701_76835784_76835858_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77016081
ES.26210.11	chr5	+	4235	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	15	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.66498277832681	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCTCGGCCGGTTGTCG	NA	False	NA	NA	False	AGTAAA	-16	NA	76805546	77018540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ES.26210.12	chr5	+	6920	8	NIC	ENSMUSG00000036377.20	novel	6921	11	NA	NA	12245	106	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	2.55550625999976	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	4139	False	NA	NA	False	AATAAA	-25	NA	76970079	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.13	chr5	+	4291	1	Intergenic	novelGene_21769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAGAGACACCGCTGC	5982	False	NA	NA	False	AATAAA	-18	NA	76971922	76976213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_76971900_76976200
ES.26210.14	chr5	+	3925	8	NNC	ENSMUSG00000036377.20	novel	436	3	NA	NA	-9491	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.28260722659316	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTGCCTGGCTCCAAT	4245	False	NA	NA	False	AATAAA	-24	NA	76978954	77016262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76979104_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77016081
ES.26210.15	chr5	+	4005	3	NIC	ENSMUSG00000036377.20	novel	436	3	NA	NA	-2174	0	intron_retention	FALSE	canonical	2	3	junction_2	0.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGCCTGGCTCCAATCA	2761	False	NA	NA	False	AATAAA	-26	NA	77004514	77016264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77007002_77013846_77015182_77016081
ES.26210.16	chr5	+	6266	4	NNC	ENSMUSG00000036377.20	novel	6921	11	NA	NA	-2045	106	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.24721912892465	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	2890	False	NA	NA	False	AATAAA	-25	NA	77004643	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77007002_77013846_77014672_77015018_77015182_77018363
ES.26210.17	chr5	+	2629	4	ISM	ENSMUSG00000036377.20	ENSMUST00000121160.8	6921	11	104689	2637	-1785	19	3prime_fragment	FALSE	canonical	1	2	junction_3	3.39934634239519	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCTCGGCCGGTTGTCG	3150	False	NA	NA	False	AGTAAA	-16	NA	77004903	77018540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.18	chr5	+	3150	3	ISM	ENSMUSG00000036377.20	ENSMUST00000121160.8	6921	11	105072	4915	-1402	-2	internal_fragment	FALSE	canonical	2	4	junction_1	3	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTGCCTGGCTCCAAT	3533	False	NA	NA	False	AATAAA	-24	NA	77005286	77016262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77007002_77013846_77014038_77015018
ES.26210.2	chr5	+	7141	11	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	-1	106	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.28785644455472	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	AATAAA	-25	NA	76805528	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.3	chr5	+	7109	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2659863237109	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTGGCACTGATGGA	NA	False	NA	NA	False	AATAAA	-10	NA	76805531	77021390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.4	chr5	+	4401	11	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.21869538788622	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGCCTGGCTCCAATCA	NA	False	NA	NA	False	AATAAA	-26	NA	76805531	77016264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77016081
ES.26210.5	chr5	+	6957	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	0	106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.94405318873308	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	AATAAA	-25	NA	76805531	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ES.26210.6	chr5	+	7120	11	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	9	106	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.57910603363466	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGTGTGATTTTAACA	NA	False	NA	NA	False	AATAAA	-25	NA	76805540	77021283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ES.26210.7	chr5	+	4069	9	NIC	ENSMUSG00000036377.20	novel	936	5	NA	NA	9	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.02919036532155	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCTCGGCCGGTTGTCG	NA	False	NA	NA	False	AGTAAA	-16	NA	76805540	77018540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ES.26210.8	chr5	+	7091	12	NNC	ENSMUSG00000036377.20	novel	583	4	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.41363333736702	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTGTGATATTTAGTT	NA	False	NA	NA	False	AATATA	-19	NA	76805545	77021177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_76805701_76835784_76835858_76907432_76907579_76970312_76970485_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77018363
ES.26210.9	chr5	+	4251	10	NIC	ENSMUSG00000036377.20	novel	583	4	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.16617929972778	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGCCTGGCTCCAATCA	NA	False	NA	NA	False	AATAAA	-26	NA	76805545	77016264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_76805701_76907432_76907579_76970312_76970485_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77007002_77013846_77014038_77015018_77015182_77016081
ES.26211.1	chr5	+	3197	2	Antisense	novelGene_ENSMUSG00000055923.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGCCGGGCGGTGGT	8048	False	NA	NA	False	AGTAAA	-38	NA	77024086	77028884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77025134_77026734
ES.26211.2	chr5	+	3168	5	Antisense	novelGene_ENSMUSG00000055923.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGTATGTGCTT	8048	False	NA	NA	False	NA	NA	NA	77024086	77032598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77025508_77026252_77026373_77027755_77027920_77030112_77030910_77031932
ES.26211.3	chr5	+	3380	2	Antisense	novelGene_ENSMUSG00000055923.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8051	False	NA	NA	False	AGTAAA	-6	NA	77024089	77028852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77026373_77027755
ES.26212.1	chr5	+	383	1	Intergenic	novelGene_21770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGCTTAATTGAAAG	8398	False	NA	NA	False	NA	NA	NA	77045479	77045862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77045500_77045900
ES.26213.1	chr5	-	1390	1	Intergenic	novelGene_21768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTTGATTTGAATGGT	NA	False	NA	NA	False	AATAAA	-17	NA	76924023	76922633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_76922600_76924000
ES.26214.1	chr5	-	1991	1	Antisense	novelGene_ENSMUSG00000036377.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-24	NA	77005329	77003338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_77003300_77005300
ES.26215.1	chr5	-	4131	17	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-10	9352	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.5600734185732	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTGTTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	77053247	77012153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77012241_77023781_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805
ES.26215.10	chr5	-	3843	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	19.0349386363311	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053358	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
ES.26215.11	chr5	-	3689	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	5	0	4	0	multi-exon	FALSE	canonical	3	29	junction_15	18.6828501275605	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053356	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.12	chr5	-	3876	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_16	25.5535589497823	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053337	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053117
ES.26215.14	chr5	-	5348	13	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-2	2	intron_retention	FALSE	canonical	3	5	junction_12	25.6778925666938	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTGTGGTCCTTT	NA	False	NA	-1	True	ATTAAA	-18	NA	77053341	77023784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77053269
ES.26215.15	chr5	-	3849	16	NNC	ENSMUSG00000055923.17	novel	4066	18	NA	NA	12	2	intron_retention	FALSE	canonical	2	3	junction_9	30.9941930044968	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTGTGGTCCTTT	NA	False	NA	-1	True	ATTAAA	-18	NA	77053322	77023784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036498_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.18	chr5	-	3893	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.6647939483827	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTGTGGTCCTTT	NA	False	NA	-1	True	ATTAAA	-18	NA	77053274	77023784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77024388_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
ES.26215.19	chr5	-	3876	15	NIC	ENSMUSG00000055923.17	novel	4066	18	NA	NA	24	2	intron_retention	FALSE	canonical	1	1	junction_14	30.0463077972136	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTCTGTGGTCCTTT	NA	False	NA	-1	True	ATTAAA	-18	NA	77053310	77023784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77053117
ES.26215.2	chr5	-	5953	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	21	-2280	-1	4	multi-exon	FALSE	canonical	3	29	junction_15	18.6828501275605	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCTTGTTCATCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	77053340	77021501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.20	chr5	-	3509	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	30.4517104062591	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053319	77023785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.21	chr5	-	3899	16	NNC	ENSMUSG00000055923.17	novel	4066	18	NA	NA	17	1	intron_retention	FALSE	canonical	0	0	junction_12	35.4672932275482	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053317	77023785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77042136_77042306_77044223_77044538_77049007_77049129_77049764_77050033_77053269
ES.26215.22	chr5	-	4085	16	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-23	1	intron_retention	FALSE	canonical	0	0	junction_3	26.2987959166702	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053298	77023785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026368_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805
ES.26215.23	chr5	-	3628	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	24.6315709144643	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATTTGTCTGTGGTCCTT	NA	False	NA	-2	True	ATTAAA	-17	NA	77053319	77023785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77053117
ES.26215.24	chr5	-	3614	16	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	26.445415481705	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	77053345	77023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036498_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.25	chr5	-	5503	18	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	35.7113572699538	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	77053341	77023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77024388_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77032158_77032284_77032404_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.26	chr5	-	3584	16	NNC	ENSMUSG00000055923.17	novel	3515	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	39.7322147493553	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	77053271	77023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035876_77035984_77036498_77036682_77038308_77038374_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
ES.26215.27	chr5	-	3400	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	34.6351979751164	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	77053319	77023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77024388_77024526_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77052055_77052228_77053269
ES.26215.28	chr5	-	3552	17	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	29.2222090198534	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	77053319	77023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052204_77052228_77052805_77052860_77053269
ES.26215.29	chr5	-	3637	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	25.6532012562541	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAATTTGTCTGTGGTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	77053274	77023787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
ES.26215.3	chr5	-	3558	1	NIC	ENSMUSG00000055923.17	novel	4066	18	NA	NA	-557	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTTGAAGTTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	77025071	77021513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77021500_77025100
ES.26215.30	chr5	-	4420	16	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	23.8815595991738	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAATTTGTCTGTGGTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	77053262	77023787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052438
ES.26215.31	chr5	-	3846	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	33.6172737405935	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAATTTGTCTGTGGTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	77053363	77023787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033893_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77042136_77042210_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.32	chr5	-	3689	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-29	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	33.1622432142339	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053304	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77024388_77024526_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.34	chr5	-	3783	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-25	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.7109164519448	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053300	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77024388_77024526_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053117
ES.26215.35	chr5	-	3774	17	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6320534852042	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053373	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025352_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.36	chr5	-	4192	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	4	-2	intron_retention	FALSE	canonical	3	18	junction_15	24.4553107161251	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053356	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.37	chr5	-	3474	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	23.7800293506624	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053320	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77053269
ES.26215.38	chr5	-	7929	15	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	6	junction_14	26.8481177845194	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053276	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77030910_77031932_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053117
ES.26215.39	chr5	-	3547	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	30.2784118180301	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAATTTGTCTGTGGTC	NA	False	NA	-5	True	ATTAAA	-14	NA	77053299	77023788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.4	chr5	-	4354	18	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	492	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	34.7123623063285	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTGTGGTGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	77053319	77023289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033893_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77042136_77042210_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.40	chr5	-	3499	15	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	74	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.1141315010636	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGATTCTATTTTG	NA	False	NA	-26	True	NA	NA	NA	77049960	77023809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77042136_77042306_77044223_77044538_77049007_77049129_77049764
ES.26215.41	chr5	-	4104	11	NIC	ENSMUSG00000055923.17	novel	2264	13	NA	NA	17	-1079	intron_retention	FALSE	canonical	3	18	junction_10	23.8681796540918	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCCAAAGCCATTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	77053317	77031757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.42	chr5	-	1215	5	FSM	ENSMUSG00000055923.17	ENSMUST00000154548.8	1080	5	-2	-133	-2	133	multi-exon	FALSE	canonical	3	29	junction_4	25.8891869319992	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAAGCTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	77053341	77043955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.43	chr5	-	1099	5	FSM	ENSMUSG00000055923.17	ENSMUST00000154548.8	1080	5	2	-21	2	21	multi-exon	FALSE	canonical	3	29	junction_4	25.8891869319992	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAATAAATTTAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	77053337	77044067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.5	chr5	-	4160	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	20	-486	-2	486	multi-exon	FALSE	canonical	3	29	junction_15	18.6828501275605	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTTTTGGTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	77053341	77023295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.6	chr5	-	3730	17	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	23.6798305526032	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053343	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77052805_77052860_77053269
ES.26215.7	chr5	-	3400	15	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	15	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	33.0750537969853	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053319	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036498_77036682_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.8	chr5	-	3906	17	NNC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4865422641166	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053341	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77024270_77024384_77024617_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26215.9	chr5	-	3711	16	NIC	ENSMUSG00000055923.17	novel	3694	16	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	26.5346733329975	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGGTCCTTTCCA	NA	False	NA	2	True	ATTAAA	-21	NA	77053295	77023781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033893_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ES.26216.1	chr5	+	1069	3	Antisense	novelGene_ENSMUSG00000029246.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTGCAACAGTGTTTA	NA	False	NA	NA	False	TATAAA	-18	NA	77053479	77063538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77054019_77060873_77061073_77063207
ES.26217.1	chr5	+	219	1	Intergenic	novelGene_21773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77066971	77067190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77067000_77067200
ES.26218.1	chr5	+	1084	1	Intergenic	novelGene_21774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	77087902	77088986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77087900_77089000
ES.26218.2	chr5	+	3631	1	Intergenic	novelGene_21775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCAGATGTTTGAGGAG	NA	False	NA	NA	False	TTTAAA	-14	NA	77088632	77092263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77088600_77092300
ES.26218.3	chr5	+	4884	1	Intergenic	novelGene_21776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTATTTATGGATTGA	NA	False	NA	NA	False	NA	NA	NA	77088739	77093623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77088700_77093600
ES.26219.1	chr5	+	117	1	Antisense	novelGene_ENSMUSG00000029246.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	77097329	77097446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77097300_77097400
ES.2622.1	chr10	-	3439	12	Antisense	novelGene_ENSMUSG00000019841.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAATGAAAGAATGA	2724	False	NA	NA	False	NA	NA	NA	39750185	39720648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_39722277_39722661_39722908_39723968_39724078_39727270_39727398_39727860_39728068_39730692_39730803_39735100_39735216_39738684_39738823_39739728_39739923_39740587_39740836_39743287_39743497_39750077
ES.26220.11	chr5	+	2188	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	17	18	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	1273.38202350189	1346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTCCTCATGCACCTG	303	False	NA	27	True	NA	NA	NA	77099170	77115178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099516_77099615_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.12	chr5	+	1927	9	NIC	ENSMUSG00000029247.18	novel	1862	10	NA	NA	17	-12	combination_of_known_splicesites	FALSE	canonical	2	185	junction_1	1307.53029960112	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAACAATATATTCT	303	False	NA	3	True	ATTAAA	-6	NA	77099170	77115340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114494
ES.26220.13	chr5	+	2205	11	NNC	ENSMUSG00000029247.18	novel	1862	10	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	1493.53632697702	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	308	False	NA	10	True	ATTAAA	-13	NA	77099175	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099249_77099615_77099683_77102287_77102405_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.15	chr5	+	2557	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	16	junction_2	1380.81618375993	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGCTGTGTGGTCTAT	331	False	NA	18	True	ATTAAA	-21	NA	77099198	77115355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77102287_77102405_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.16	chr5	+	2437	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	48	-3	7	-1	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGCTGTGTGGTCTAT	334	False	NA	18	True	ATTAAA	-21	NA	77099201	77115355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.19	chr5	+	1911	9	NIC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	-184	-5	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	1446.23095817197	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	572	False	NA	10	True	ATTAAA	-13	NA	77099439	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.2	chr5	+	2128	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	1045.0028294604	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCGCTGTGTGGTCTAT	280	False	NA	18	True	ATTAAA	-21	NA	77099147	77115355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099253_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.21	chr5	+	1988	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	320	174	-150	18	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTCCTCATGCACCTG	606	False	NA	27	True	NA	NA	NA	77099473	77115178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.22	chr5	+	2124	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-143	-5	intron_retention	FALSE	canonical	0	0	junction_8	1084.55647616895	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	613	False	NA	10	True	ATTAAA	-13	NA	77099480	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114227_77114494
ES.26220.23	chr5	+	2067	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	-143	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1064.12405291864	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	613	False	NA	10	True	ATTAAA	-13	NA	77099480	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099533_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.24	chr5	+	2705	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	-130	-5	intron_retention	FALSE	canonical	0	0	junction_2	1384.11777847528	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	626	False	NA	10	True	ATTAAA	-13	NA	77099493	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77102287_77102856_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.25	chr5	+	1950	8	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-124	-5	intron_retention	FALSE	canonical	0	0	junction_6	1186.81415425276	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	632	False	NA	10	True	ATTAAA	-13	NA	77099499	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77114093_77114253_77114494
ES.26220.27	chr5	+	2086	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-48	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1112.77959969618	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	708	False	NA	10	True	ATTAAA	-13	NA	77099575	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77104361_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.28	chr5	+	2057	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1084.55647616895	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	715	False	NA	10	True	ATTAAA	-13	NA	77099582	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114485
ES.26220.29	chr5	+	1865	8	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-34	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	1187.0615409661	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTCTCGCTGTGTGG	722	False	NA	13	True	ATTAAA	-16	NA	77099589	77115350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099683_77104392_77104591_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.31	chr5	+	1952	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_3	1337.04186078821	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	724	False	NA	10	True	ATTAAA	-13	NA	77099591	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099683_77104395_77104591_77107161_77107341_77109040_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.33	chr5	+	1952	8	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-29	-5	combination_of_known_splicesites	FALSE	canonical	1	9	junction_5	1186.06683227053	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	727	False	NA	10	True	ATTAAA	-13	NA	77099594	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77112288_77112470_77114093_77114253_77114494
ES.26220.39	chr5	+	2845	3	ISM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	11446	5	1318	-1	3prime_fragment	FALSE	canonical	3	3340	junction_1	228	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	NA	False	NA	14	True	ATTAAA	-17	NA	77110640	77115351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77112470_77114093_77114253_77114494
ES.26220.4	chr5	+	2294	9	NIC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	1431.75232997017	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTCTCGCTGTGTGG	288	False	NA	13	True	ATTAAA	-16	NA	77099155	77115350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77112288_77112470_77114093_77114253_77114494
ES.26220.40	chr5	+	3390	1	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	-2041	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1347	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	NA	False	NA	15	True	ATTAAA	-18	NA	77111962	77115352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77112000_77115400
ES.26220.5	chr5	+	2050	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1034.83093388649	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	294	False	NA	17	True	ATTAAA	-20	NA	77099161	77115354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099190_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26220.6	chr5	+	2127	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1355.09773689694	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATATATTCTCGCTGTG	296	False	NA	10	True	ATTAAA	-13	NA	77099163	77115347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77099279_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114250_77114494
ES.26220.7	chr5	+	2370	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	-30	5	11	-1	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTCTCGCTGTGTGGT	297	False	NA	14	True	ATTAAA	-17	NA	77099164	77115351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ES.26221.1	chr5	-	180	1	Intergenic	novelGene_21771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGACGGTGT	NA	False	NA	NA	False	NA	NA	NA	77055401	77055221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77055200_77055400
ES.26222.1	chr5	-	185	1	Intergenic	novelGene_21772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	77057385	77057200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77057200_77057400
ES.26223.1	chr5	-	6107	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	393	-2519	-20	2492	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGCCATGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	77099032	77058603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.10	chr5	-	3633	11	NNC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-37	-52	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	187.950951048405	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATCTGATTTTTTAG	NA	False	NA	-3	True	TATAAA	-19	NA	77099049	77061174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77063333_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.13	chr5	-	3358	11	NNC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	419	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	186.287546551024	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCATCTGATTTTTTA	NA	False	NA	-4	True	TATAAA	-18	NA	77098593	77061175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098541
ES.26223.17	chr5	-	3817	12	NNC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-25	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	180.386133127781	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTGCATCTGATTTT	NA	False	NA	-7	True	TATAAA	-15	NA	77099450	77061178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803_77099071_77099203
ES.26223.18	chr5	-	4103	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-52	-56	intron_retention	FALSE	canonical	3	550	junction_5	49.1854640777457	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTGCATCTGATTTT	NA	False	NA	-7	True	TATAAA	-15	NA	77099064	77061178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.19	chr5	-	5105	8	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	24973	-61	intron_retention	FALSE	canonical	3	550	junction_5	30.9278290903985	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGTTTTTGCATCTG	NA	False	NA	-12	True	TATAAA	-10	NA	77074039	77061183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77069390_77070057_77070204_77070301_77070415_77073520
ES.26223.2	chr5	-	5280	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	352	-1651	-61	1624	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGGTTATTCACTGTGG	NA	False	NA	NA	False	NA	NA	NA	77099073	77059471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.20	chr5	-	3856	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-45	170	-45	-170	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTTGTTTTCTCTGC	NA	False	NA	91	True	ATTAAA	-27	NA	77099470	77061292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.21	chr5	-	3884	11	NNC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	1	-170	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	187.950951048405	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTTGTTTTCTCTGC	NA	False	NA	91	True	ATTAAA	-27	NA	77099418	77061292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77063333_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.24	chr5	-	3949	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-20	-178	intron_retention	FALSE	canonical	3	550	junction_5	49.1854640777457	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTTTCAAGCCTTGTT	NA	False	NA	83	True	ATTAAA	-19	NA	77099032	77061300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.27	chr5	-	3715	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-5	271	-5	-271	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGTTTGTACAACTTTCT	NA	False	NA	-10	True	TATAAA	-17	NA	77099430	77061393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.28	chr5	-	3286	11	NNC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-1	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	188.559698769382	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCGTTTGTACAACT	NA	False	NA	-14	True	TATAAA	-13	NA	77099013	77061397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070309_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.3	chr5	-	8563	8	NIC	ENSMUSG00000029246.15	novel	2057	10	NA	NA	-20	1608	intron_retention	FALSE	canonical	3	550	junction_3	53.3463844575607	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTATA	NA	False	NA	NA	False	NA	NA	NA	77099032	77059487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.32	chr5	-	2980	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	352	649	-61	-649	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTAGTCTACATTTG	NA	False	NA	NA	False	AATATA	-18	NA	77099073	77061771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.33	chr5	-	3147	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-54	754	intron_retention	FALSE	canonical	3	550	junction_5	49.1854640777457	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGAGTGCTTGATCATT	NA	False	NA	NA	False	ATTAAA	-12	NA	77099066	77062136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.34	chr5	-	2563	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	390	1028	-23	740	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGGCTTTTTGAATTG	NA	False	NA	NA	False	NA	NA	NA	77099035	77062150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.35	chr5	-	3218	9	NIC	ENSMUSG00000029246.15	novel	2057	10	NA	NA	-37	9	intron_retention	FALSE	canonical	3	550	junction_4	50.4354476038431	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCAGCATCTGAGGATT	NA	False	NA	-6	True	ATTAAA	-29	NA	77099049	77062881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.36	chr5	-	2211	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	8	1762	2	6	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATGCAGCATCTGAGG	NA	False	NA	-9	True	ATTAAA	-26	NA	77099417	77062884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.37	chr5	-	5157	8	NIC	ENSMUSG00000029246.15	novel	2057	10	NA	NA	-5	5	intron_retention	FALSE	canonical	3	550	junction_3	50.9549621064063	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAATGCAGCATCTGAG	NA	False	NA	-10	True	ATTAAA	-25	NA	77099430	77062885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.38	chr5	-	2532	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-61	3	intron_retention	FALSE	canonical	3	561	junction_7	45.3442252710541	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGAATGCAGCATCTG	NA	False	NA	-12	True	ATTAAA	-23	NA	77099073	77062887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.39	chr5	-	2046	10	FSM	ENSMUSG00000029246.15	ENSMUST00000031158.9	2057	10	9	2	9	-2	multi-exon	FALSE	canonical	3	550	junction_5	49.1347353938354	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACATGGAATGCAGC	NA	False	NA	-17	True	ATTAAA	-18	NA	77099003	77062892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.4	chr5	-	4183	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-22	-180	-22	153	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCATGTGGAACAATTTC	NA	False	NA	NA	False	AATAGA	-11	NA	77099447	77060942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.6	chr5	-	4042	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-6	-55	-6	28	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCTGGTGAGATCCTAT	NA	False	NA	NA	False	TTTAAA	-35	NA	77099431	77061067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.7	chr5	-	3564	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-61	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	187.556477090943	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTGTGCATTTTAAAA	NA	False	NA	51	True	AATAAA	-5	NA	77099073	77061120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77098803
ES.26223.8	chr5	-	5376	9	NIC	ENSMUSG00000029246.15	novel	2057	10	NA	NA	-21	2	intron_retention	FALSE	canonical	3	550	junction_4	50.4354476038431	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTGTGCATTTTAAAA	NA	False	NA	51	True	AATAAA	-5	NA	77099446	77061120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77063253_77063791_77063913_77065880_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26223.9	chr5	-	3963	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	-33	51	-33	-51	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATCTGATTTTTTAGG	NA	False	NA	-2	True	TATAAA	-20	NA	77099458	77061173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ES.26224.1	chr5	+	2057	1	Intergenic	novelGene_21777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGTGTTCTCCCCAACT	NA	False	NA	NA	False	NA	NA	NA	77117494	77119551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77117500_77119600
ES.26225.1	chr5	+	3104	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	14	507	-10	-507	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTGGGTTCACAAGGC	NA	False	NA	34	True	AATAAA	-36	NA	77122543	77147277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.11	chr5	+	2364	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	31	1230	-7	-109	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTAGAATCTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	77122560	77146554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.12	chr5	+	2150	20	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-7	34897	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	70.9950643986965	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGGTTTCTCTGTG	NA	False	NA	NA	False	AAAACA	-41	NA	77122560	77182681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038_77146313_77182653
ES.26225.13	chr5	+	5437	18	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	253	junction_5	26.8045598558481	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77122563	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.14	chr5	+	3801	18	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-4	-523	intron_retention	FALSE	canonical	3	245	junction_6	29.2916370317536	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTTGAAACTTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	77122563	77147261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77145430_77146038
ES.26225.15	chr5	+	2105	19	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-4	104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.7911777316149	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACAGAGCTCCCTCCT	NA	False	NA	4	True	AATAAA	-14	NA	77122563	77146292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135707_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.17	chr5	+	3567	19	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-4	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.9374838009228	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATGTGACTAACAATG	NA	False	NA	10	True	AATAAA	-18	NA	77122563	77147766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138125_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.18	chr5	+	8384	16	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	0	-5	intron_retention	FALSE	canonical	3	253	junction_5	27.4975554469039	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77122567	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77142085_77142474_77142579_77142682_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.19	chr5	+	4544	17	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	3	-8	intron_retention	FALSE	canonical	3	245	junction_6	30.140750550542	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAATGTTTCGGTATT	NA	False	NA	20	True	AATAAA	-28	NA	77122570	77147776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.2	chr5	+	3610	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	17	-2	-7	2	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGTATTGGCATTTTAT	NA	False	NA	30	True	AATAAA	-38	NA	77122546	77147786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.20	chr5	+	4525	17	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	5	130	intron_retention	FALSE	canonical	3	253	junction_4	26.3320147349192	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCTCAAAAAATGTAT	NA	False	NA	107	True	NA	NA	NA	77122572	77146793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128474_77130081_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.21	chr5	+	5052	1	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	403	3319	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAATCTCATCCTGAGA	2136	False	NA	NA	False	NA	NA	NA	77128828	77133880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77128800_77133900
ES.26225.22	chr5	+	1838	7	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	19453	528	143	-528	3prime_fragment	FALSE	canonical	3	284	junction_2	16.8292074151524	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATTTCTGTTGAAACT	NA	False	NA	13	True	AATAAA	-15	NA	77141982	77147256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.23	chr5	+	2356	7	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	19458	5	148	-5	3prime_fragment	FALSE	canonical	3	284	junction_2	16.8292074151524	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77141987	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.24	chr5	+	3818	2	FSM	ENSMUSG00000036323.15	ENSMUST00000132860.2	2355	2	-1989	526	-272	-526	multi-exon	FALSE	canonical	3	293	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTCTGTTGAAACTTC	NA	False	NA	15	True	AATAAA	-17	NA	77142831	77147258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77145430_77146038
ES.26225.25	chr5	+	1940	3	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	21968	5	-323	-5	3prime_fragment	FALSE	canonical	3	287	junction_1	3	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77144497	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77144537_77145269_77145430_77146038
ES.26225.3	chr5	+	3556	19	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	72.9164285710398	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77122552	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138186_77139870_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.4	chr5	+	2133	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	24	1468	0	128	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATAGTCCTGAAATGAT	NA	False	NA	28	True	AATAAA	-38	NA	77122553	77146316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.5	chr5	+	3275	16	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.9504485948834	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATGTTTCGGTATTGG	NA	False	NA	22	True	AATAAA	-30	NA	77122554	77147778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128229_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.6	chr5	+	4324	18	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	5	-5	intron_retention	FALSE	canonical	3	245	junction_6	29.2916370317536	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTCGGTATTGGC	NA	False	NA	23	True	AATAAA	-31	NA	77122558	77147779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77145430_77146038
ES.26225.7	chr5	+	3059	19	NNC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	5	-523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	95.5434746885184	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTTGAAACTTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	77122558	77147261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137151_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143634_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.8	chr5	+	2498	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	31	1096	-7	25	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGGACTCTCTCTCGTG	NA	False	NA	2	True	CATAAA	-18	NA	77122560	77146688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ES.26225.9	chr5	+	3931	18	NIC	ENSMUSG00000036323.15	novel	3625	19	NA	NA	-7	-527	intron_retention	FALSE	canonical	3	245	junction_6	29.3228066463525	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTTCTGTTGAAACTT	NA	False	NA	14	True	AATAAA	-16	NA	77122560	77147257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77143763_77144498_77144537_77145269_77145430_77146038
ES.26226.1	chr5	-	175	1	Intergenic	novelGene_21778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTAAAAAAAAAGTACAAT	NA	False	NA	NA	False	NA	NA	NA	77124095	77123920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77123900_77124100
ES.26227.1	chr5	-	1123	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	-14	4	-14	-4	multi-exon	FALSE	canonical	3	24	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCATGGAGTCTTTTT	3129	False	NA	-7	True	ATTAAA	-16	NA	77243138	77234838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77235664_77242712_77242870_77242997
ES.26228.1	chr5	+	174	1	Intergenic	novelGene_21779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAAGAAAGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	77244295	77244469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77244300_77244500
ES.26228.2	chr5	+	205	2	Antisense	novelGene_ENSMUSG00000053030.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAACAATGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	77244295	77372921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_77244455_77372875
ES.26228.3	chr5	+	2079	1	Intergenic	novelGene_21780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGACTAGCTTTGTAG	9663	False	NA	NA	False	NA	NA	NA	77278410	77280489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77278400_77280500
ES.26228.4	chr5	+	136	1	Intergenic	novelGene_21782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	6710	False	NA	NA	False	NA	NA	NA	77292384	77292520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77292400_77292500
ES.26228.5	chr5	+	128	1	Intergenic	novelGene_21784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	77345159	77345287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77345200_77345300
ES.26228.6	chr5	+	202	1	Intergenic	novelGene_21785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAGCAACAATGAG	NA	False	NA	NA	False	NA	NA	NA	77372713	77372915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77372700_77372900
ES.26229.1	chr5	-	2019	2	NNC	ENSMUSG00000106783.2	novel	651	2	NA	NA	-34	1849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGTCCGGGCTTTCGT	NA	False	NA	NA	False	NA	NA	NA	77288133	77284468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77286431_77288076
ES.2623.1	chr10	-	6916	4	ISM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	-10	1	-10	-1	intron_retention	FALSE	canonical	2	4	junction_3	5.43650214343336	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGACTGCTTTGTAGC	NA	False	NA	NA	False	AATAAA	-25	NA	39775221	39766009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_39768926_39770011_39770129_39770767_39770937_39771507
ES.2623.10	chr10	-	2956	5	FSM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	-8	1042	-8	-1042	multi-exon	FALSE	canonical	0	0	junction_4	6.80073525436772	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTAAAGTTGTATCAT	NA	False	NA	NA	False	NA	NA	NA	39775219	39767050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39771507_39771993_39774909
ES.2623.11	chr10	-	2368	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	110	1050	41	-1050	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGTAAGTTTTAAAGT	NA	False	NA	NA	False	NA	NA	NA	39775124	39767058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
ES.2623.2	chr10	-	3555	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	-28	1	-28	-1	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGACTGCTTTGTAGC	NA	False	NA	NA	False	AATAAA	-25	NA	39775262	39766009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
ES.2623.3	chr10	-	3984	5	FSM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	4	2	4	-2	multi-exon	FALSE	canonical	0	0	junction_4	6.80073525436772	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGACTGCTTTGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	39775207	39766010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39771507_39771993_39774909
ES.2623.4	chr10	-	4822	5	NIC	ENSMUSG00000096687.9	novel	3990	5	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	6.80073525436772	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGACTGCTTTGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	39775255	39766010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39768926_39770011_39770129_39770767_39770937_39771507_39771993_39774119
ES.2623.5	chr10	-	7386	3	ISM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	87	5	41	-5	intron_retention	FALSE	canonical	2	13	junction_1	2	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGTTGACTGCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	39775124	39766013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_39768926_39770011_39770129_39770767
ES.2623.6	chr10	-	3305	4	NNC	ENSMUSG00000096687.9	novel	3528	4	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.25718035235908	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGACTGTTGACTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	39775200	39766015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39768926_39770011_39770129_39770767_39770937_39775091
ES.2623.7	chr10	-	3356	4	NNC	ENSMUSG00000096687.9	novel	3528	4	NA	NA	56	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.25718035235908	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTGACTGTTGACTG	NA	False	NA	NA	False	AATAAA	-16	NA	39775109	39766018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39768926_39770011_39770129_39770767_39770900_39774909
ES.2623.8	chr10	-	6244	4	NNC	ENSMUSG00000096687.9	novel	3528	4	NA	NA	-18	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.25718035235908	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGACTGTTGACT	NA	False	NA	NA	False	AATAAA	-15	NA	39775252	39766019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39768926_39770011_39770129_39770767_39770937_39772200
ES.2623.9	chr10	-	8103	2	ISM	ENSMUSG00000096687.9	ENSMUST00000178045.9	3990	5	2	12	2	-12	intron_retention	FALSE	canonical	2	13	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTGTGACTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	39775209	39766020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_39768926_39770011
ES.26230.1	chr5	-	246	1	Intergenic	novelGene_21781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCACTGACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	77289913	77289667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77289700_77289900
ES.26231.1	chr5	-	176	1	Intergenic	novelGene_21783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7414	False	NA	NA	False	NA	NA	NA	77343942	77343766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77343800_77343900
ES.26232.1	chr5	-	624	4	FSM	ENSMUSG00000053030.12	ENSMUST00000065216.11	631	4	1	6	1	-1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGTCCCTCGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	77359317	77352959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77353273_77354775_77354886_77357579_77357642_77359178
ES.26233.1	chr5	-	179	1	Intergenic	novelGene_21786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGAATATTTTA	4242	False	NA	NA	False	NA	NA	NA	77376879	77376700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77376700_77376900
ES.26234.1	chr5	+	151	1	Intergenic	novelGene_21787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATAAAATAAATAGATAAA	NA	False	NA	NA	False	NA	NA	NA	77385480	77385631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77385500_77385600
ES.26235.1	chr5	+	7052	6	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-19709	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	418.873537001325	1195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTTTATTATTGGTG	6605	False	NA	18	True	AATAAA	-18	NA	77393628	77434283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77393766_77396540_77396670_77397230_77397307_77415778_77416671_77423080_77423165_77428549
ES.26235.10	chr5	+	7135	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-125	-6	-125	6	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTATTATTGGTGTG	3571	False	NA	20	True	AATAAA	-20	NA	77413212	77434285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.11	chr5	+	6061	5	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-90	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	349.611480789748	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTTTATTATTGGTG	3606	False	NA	18	True	AATAAA	-18	NA	77413247	77434283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549_77430864_77431900
ES.26235.12	chr5	+	7056	5	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-88	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	357.313850137383	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGGACCTTTGTTTATTA	3608	False	NA	12	True	AATAAA	-12	NA	77413249	77434277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413258_77413291_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.14	chr5	+	7697	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	-770	-3	-65	3	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTGTTTATTATTGGT	3631	False	NA	17	True	AATAAA	-17	NA	77413272	77434282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
ES.26235.15	chr5	+	4170	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-64	2898	-64	-2898	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATTTTGGTGCTTTT	3632	False	NA	NA	False	TATAAA	-24	NA	77413273	77431381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.2	chr5	+	159	1	Intergenic	novelGene_21788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATTTTTA	7624	False	NA	NA	False	NA	NA	NA	77394647	77394806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77394600_77394800
ES.26235.20	chr5	+	5778	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-32	1258	-32	-1258	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACCTGAGATTGAGTGG	3664	False	NA	NA	False	ATTAAA	-29	NA	77413305	77433021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.22	chr5	+	3962	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-28	3070	-28	-3070	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTAGCACTTTACAGT	3668	False	NA	NA	False	AGTAAA	-32	NA	77413309	77431209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.23	chr5	+	4749	5	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	357.313850137383	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGACCTTTGTTTATTAT	3669	False	NA	13	True	AATAAA	-13	NA	77413310	77434278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549_77429191_77431471
ES.26235.24	chr5	+	1284	2	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-23	2324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTGGTGCTGGAGAA	3673	False	NA	NA	False	AGTAAA	-11	NA	77413314	77436603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413636_77435640
ES.26235.25	chr5	+	1969	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	-22	5057	-22	-5057	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCTGAGTGCAAATCAA	3674	False	NA	-17	True	AAAAAG	-6	NA	77413315	77429222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ES.26235.28	chr5	+	6194	5	NNC	ENSMUSG00000029249.16	novel	6924	4	NA	NA	-309	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	395.109478499314	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGGACCTTTGTTTATTA	4092	False	NA	12	True	AATAAA	-12	NA	77413733	77434277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549_77430864_77431900
ES.26235.29	chr5	+	7085	3	NIC	ENSMUSG00000029249.16	novel	6924	4	NA	NA	-245	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.5	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4156	False	NA	14	True	AATAAA	-14	NA	77413797	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77414261_77415778_77416671_77428549
ES.26235.3	chr5	+	188	1	Intergenic	novelGene_21790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAATTAATTTAGT	NA	False	NA	NA	False	NA	NA	NA	77405302	77405490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77405300_77405500
ES.26235.31	chr5	+	7052	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	235	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	393.767274753333	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4636	False	NA	14	True	AATAAA	-14	NA	77414277	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77414624_77415778_77416671_77423080_77423165_77428549
ES.26235.32	chr5	+	6979	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	669	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.634322954164	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGGACCTTTGTTTATTA	5070	False	NA	12	True	AATAAA	-12	NA	77414711	77434277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77414987_77415778_77416671_77423080_77423165_77428549
ES.26235.33	chr5	+	4987	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	1953	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	403.634322954164	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTGTTTATTATTGGT	6354	False	NA	17	True	AATAAA	-17	NA	77415995	77434282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77416671_77423080_77423165_77428549_77432123_77433627
ES.26235.34	chr5	+	6106	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	2021	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	403.634322954164	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	6422	False	NA	14	True	AATAAA	-14	NA	77416063	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77416671_77423080_77423165_77428549_77429379_77429693
ES.26235.35	chr5	+	5841	2	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	19260	5035	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAACCAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	77433302	77439314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77438190_77438360
ES.26235.36	chr5	+	3495	1	Intergenic	novelGene_21794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77435784	77439279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77435800_77439300
ES.26235.4	chr5	+	179	1	Intergenic	novelGene_21791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	104	False	NA	NA	False	NA	NA	NA	77407681	77407860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77407700_77407900
ES.26235.5	chr5	+	6957	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-5203	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	390.478623685799	1182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	557	False	NA	14	True	AATAAA	-14	NA	77408134	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77408386_77415778_77416671_77423080_77423165_77428549
ES.26235.7	chr5	+	6845	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-705	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	403.634322954164	1182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	2991	False	NA	14	True	AATAAA	-14	NA	77412632	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77412772_77415778_77416671_77423080_77423165_77428549
ES.26235.8	chr5	+	7103	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-698	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.634322954164	1182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTTTGTTTATTATTGG	2998	False	NA	16	True	AATAAA	-16	NA	77412639	77434281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413035_77415778_77416671_77423080_77423165_77428549
ES.26235.9	chr5	+	6756	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.634322954164	1182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	3453	False	NA	14	True	AATAAA	-14	NA	77413094	77434279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77413145_77415778_77416671_77423080_77423165_77428549
ES.26236.1	chr5	+	177	1	Intergenic	novelGene_21796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAAAGG	NA	False	NA	NA	False	NA	NA	NA	77448093	77448270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77448100_77448300
ES.26237.1	chr5	+	4113	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	36	-4	36	4	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTATCTTTGATTTCTC	NA	False	NA	20	True	AATAAA	-20	NA	77458029	77497175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.13	chr5	+	4032	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	129.469751937148	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458348	77497171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479939_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488557_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.16	chr5	+	3737	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	97.2851532437847	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458349	77497171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479848_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.18	chr5	+	3590	24	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	99.1643153391025	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTATCTTTGATTTC	NA	False	NA	18	True	AATAAA	-18	NA	77458351	77497173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.19	chr5	+	5298	24	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	17	0	intron_retention	FALSE	canonical	3	372	junction_9	39.8529907229711	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458354	77497171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.2	chr5	+	4194	24	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	46	-2	intron_retention	FALSE	canonical	3	372	junction_9	37.9644147378754	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGTGTTATCTTTGA	NA	False	NA	14	True	AATAAA	-14	NA	77458039	77497169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.20	chr5	+	4748	24	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	18	1	intron_retention	FALSE	canonical	0	0	junction_15	99.4264649284402	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTATCTTTGATTT	NA	False	NA	17	True	AATAAA	-17	NA	77458355	77497172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483687_77484273_77484443_77487167_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.21	chr5	+	3734	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	97.1599483097617	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTATCTTTGAT	NA	False	NA	15	True	AATAAA	-15	NA	77458356	77497170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458431_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.22	chr5	+	3770	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.1543701921602	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGATGTGTTATCTTT	NA	False	NA	12	True	AATAAA	-12	NA	77458358	77497167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463702_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.23	chr5	+	2637	19	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	108.38245325162	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTATCTTTGATTTC	NA	False	NA	18	True	AATAAA	-18	NA	77458360	77497173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467852_77479002_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.24	chr5	+	3686	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_24	96.7702659653264	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGTGTTATCTTTGA	NA	False	NA	14	True	AATAAA	-14	NA	77458360	77497169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496176_77496926
ES.26237.25	chr5	+	4437	24	ISM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	367	2	23	-2	intron_retention	FALSE	canonical	3	372	junction_9	40.8443492978554	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGTGTTATCTTTGA	NA	False	NA	14	True	AATAAA	-14	NA	77458360	77497169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069
ES.26237.26	chr5	+	1528	7	ISM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	373	25070	29	-2854	5prime_fragment	FALSE	canonical	3	411	junction_4	40.5890653036285	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77458366	77472101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400
ES.26237.27	chr5	+	8749	19	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	30	-2	intron_retention	FALSE	canonical	3	372	junction_9	40.8391908119252	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGTGTTATCTTTGA	NA	False	NA	14	True	AATAAA	-14	NA	77458367	77497169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77480146_77482263_77482419_77483480_77483680_77484273_77487265_77488221_77488317_77490376_77493259_77496069_77496266_77496926
ES.26237.28	chr5	+	4707	24	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	30	-2	intron_retention	FALSE	canonical	0	0	junction_10	98.4525064701034	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGTGTTATCTTTGA	NA	False	NA	14	True	AATAAA	-14	NA	77458367	77497169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77475410_77478979_77479124_77479796_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.29	chr5	+	3743	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	129.23425650947	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77458367	77497171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467909_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492740_77493097_77493259_77496069_77496266_77496926
ES.26237.3	chr5	+	4099	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	66	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	96.8657432853443	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTATCTTTGAT	NA	False	NA	15	True	AATAAA	-15	NA	77458059	77497170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474360_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.30	chr5	+	2686	1	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	2267	2172	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77460604	77463290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77460600_77463300
ES.26237.31	chr5	+	3661	24	ISM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	3003	1	2659	-1	3prime_fragment	FALSE	canonical	3	372	junction_8	40.7702308090946	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTATCTTTGAT	NA	False	NA	15	True	AATAAA	-15	NA	77460996	77497170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.32	chr5	+	176	1	Intergenic	novelGene_21799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	77480773	77480949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77480800_77480900
ES.26237.4	chr5	+	3707	24	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	99.6079080681672	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTATCTTTGAT	NA	False	NA	15	True	AATAAA	-15	NA	77458333	77497170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26237.6	chr5	+	1692	6	NIC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	-1	-2854	intron_retention	FALSE	canonical	3	415	junction_3	39.1121464509428	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77458336	77472101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77468278_77468801_77468961_77471400
ES.26237.8	chr5	+	3782	25	NNC	ENSMUSG00000029250.6	novel	4145	25	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.4848189748309	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTTGATGTGTTATCTT	NA	False	NA	11	True	AATAAA	-11	NA	77458336	77497166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467909_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ES.26238.1	chr5	-	175	1	Intergenic	novelGene_21789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	77396970	77396795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77396800_77397000
ES.26239.1	chr5	-	179	1	Intergenic	novelGene_21792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGCCCATGAGGG	NA	False	NA	NA	False	NA	NA	NA	77411583	77411404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77411400_77411600
ES.2624.1	chr10	+	2373	2	FSM	ENSMUSG00000097890.3	ENSMUST00000181590.2	2400	2	24	3	-6	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATTAAAAGGCCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	39775348	39783924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_39775526_39781728
ES.26240.1	chr5	-	1533	3	Antisense	novelGene_ENSMUSG00000093061.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAATTCTTTGACCCATTG	NA	False	NA	NA	False	NA	NA	NA	77428803	77415478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_77416668_77423077_77423162_77428543
ES.26240.2	chr5	-	4373	2	Antisense	novelGene_ENSMUSG00000093061.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCAGAAATTACACATTC	NA	False	NA	NA	False	NA	NA	NA	77423085	77417059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_77417704_77419356
ES.26240.3	chr5	-	3397	1	Antisense	novelGene_ENSMUSG00000093061.3_AS_novelGene_ENSMUSG00000029249.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTCTAACCTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	77423085	77419688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_77419700_77423100
ES.26240.4	chr5	-	3359	2	Antisense	novelGene_ENSMUSG00000093061.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTCTAACCTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	77423085	77419688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_77421125_77421162
ES.26240.5	chr5	-	2580	1	Intergenic	novelGene_21793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTTAAGAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	77427303	77424723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77424700_77427300
ES.26241.1	chr5	-	1520	8	NNC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	644	8620	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	52.0192272145598	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCTAAGGCTACCTAG	NA	False	NA	NA	False	AATAAA	-6	NA	77457262	77433408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77433416_77442134_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.10	chr5	-	2604	5	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-354	5021	-354	4176	5prime_fragment	FALSE	canonical	3	116	junction_2	19.3261480900877	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77458285	77447049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.11	chr5	-	2547	5	NIC	ENSMUSG00000036285.11	novel	2815	3	NA	NA	-355	67	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	64.2222702806433	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGGGGGAGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	77458286	77451158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77451673_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.12	chr5	-	3866	3	FSM	ENSMUSG00000036285.11	ENSMUST00000150722.2	2815	3	-340	-711	-315	711	multi-exon	FALSE	canonical	3	159	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATTATCCCAAGAACC	NA	False	NA	NA	False	AATAAA	-18	NA	77458246	77452115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77454324_77455399_77455565_77456753
ES.26241.13	chr5	-	2160	3	FSM	ENSMUSG00000036285.11	ENSMUST00000150722.2	2815	3	-359	1014	-334	-387	multi-exon	FALSE	canonical	3	159	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTAGTCTGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	77458265	77453840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77454324_77455399_77455565_77456753
ES.26241.2	chr5	-	2686	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-391	-7	-391	7	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATCTGTGACCAAGTA	NA	False	NA	76	True	AATAAA	-21	NA	77458322	77442021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.3	chr5	-	2748	8	NNC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-360	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.4724433546385	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCCATGTATCTGTGAC	NA	False	NA	70	True	AATAAA	-15	NA	77458291	77442027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77453453_77453553_77454120_77454324_77455399_77455565_77456753
ES.26241.4	chr5	-	2506	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-349	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCCATGTATCTGTGAC	NA	False	NA	70	True	AATAAA	-15	NA	77458280	77442027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
ES.26241.5	chr5	-	2128	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-32	-74	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	57.0802943229973	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTCAAGTTTTTTAAC	NA	False	NA	-5	True	AATAAA	-31	NA	77457963	77442102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_77442404_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.8	chr5	-	2533	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	-367	122	-367	-122	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACAAAAATAATAAAGA	NA	False	NA	-53	True	NA	NA	NA	77458298	77442150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ES.26241.9	chr5	-	156	1	Intergenic	novelGene_21795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	77444465	77444309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77444300_77444500
ES.26242.1	chr5	-	218	1	Intergenic	novelGene_21797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTTAATTGGAGCCA	NA	False	NA	NA	False	ACTAAA	-6	NA	77471248	77471030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77471000_77471200
ES.26243.1	chr5	-	186	1	Intergenic	novelGene_21798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGTGGGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77477952	77477766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77477800_77478000
ES.26244.1	chr5	-	167	1	Intergenic	novelGene_21800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCTATACTTGTG	NA	False	NA	NA	False	NA	NA	NA	77483290	77483123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77483100_77483300
ES.26245.1	chr5	-	174	1	Intergenic	novelGene_21801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77493963	77493789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77493800_77494000
ES.26246.1	chr5	-	1186	6	FSM	ENSMUSG00000036256.14	ENSMUST00000163898.6	1200	6	13	1	13	-1	multi-exon	TRUE	canonical	0	0	junction_4	3.87814388593306	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTAAATTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-12	NA	77555874	77497095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_77497347_77499074_77499202_77499759_77499877_77503408_77503519_77549333_77549427_77555386
ES.26246.2	chr5	-	2077	1	Intergenic	novelGene_21802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAATCATGTTGCTTAA	NA	False	NA	NA	False	NA	NA	NA	77502318	77500241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77500200_77502300
ES.26247.1	chr5	+	176	1	Intergenic	novelGene_21803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAGATGCTGGT	NA	False	NA	NA	False	NA	NA	NA	77566018	77566194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_77566000_77566200
ES.26248.1	chr5	-	177	1	Intergenic	novelGene_21804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77569803	77569626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_77569600_77569800
ES.26249.1	chr5	+	4708	1	Intergenic	novelGene_21805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACGATCATGGAATT	NA	False	NA	NA	False	NA	NA	NA	78289117	78293825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_78289100_78293800
ES.2625.1	chr10	+	180	1	Intergenic	novelGene_1990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGATAGG	NA	False	NA	NA	False	NA	NA	NA	39854539	39854719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39854500_39854700
ES.2625.2	chr10	+	301	1	Intergenic	novelGene_1991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTCCAGCCTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	39854541	39854842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_39854500_39854800
ES.26250.1	chr5	-	172	1	Intergenic	novelGene_21806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79313725	79313553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_79313600_79313700
ES.26251.1	chr5	-	158	1	Intergenic	novelGene_21807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80851216	80851058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_80851100_80851200
ES.26252.1	chr5	+	178	1	Intergenic	novelGene_21808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAATGAGAA	NA	False	NA	NA	False	NA	NA	NA	81121356	81121534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_81121400_81121500
ES.26253.1	chr5	-	178	1	Intergenic	novelGene_21809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAAGTGG	NA	False	NA	NA	False	NA	NA	NA	81545393	81545215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_81545200_81545400
ES.26254.1	chr5	-	1243	6	Antisense	novelGene_ENSMUSG00000107375.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.6	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTACATTTTAACGAGG	NA	False	NA	NA	False	AATATA	-8	NA	81703965	81667067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_81667522_81670392_81670921_81672614_81672697_81672805_81672857_81703680_81703745_81703901
ES.26254.2	chr5	-	5094	3	Antisense	novelGene_ENSMUSG00000037605.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTCCCTTGTGGGCA	NA	False	NA	NA	False	AGTAAA	-12	NA	81703951	81697349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_81702330_81703680_81703745_81703901
ES.26254.3	chr5	-	3860	2	Antisense	novelGene_ENSMUSG00000037605.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGACATATTTAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	81703912	81698701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_81702330_81703680
ES.26254.4	chr5	-	748	1	Intergenic	novelGene_21810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAATAAAATACGGTA	NA	False	NA	NA	False	NA	NA	NA	81699577	81698829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_81698800_81699600
ES.26254.5	chr5	-	330	3	Antisense	novelGene_ENSMUSG00000037605.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATATATACATATGTTTT	NA	False	NA	NA	False	NA	NA	NA	81703956	81702118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_81702330_81703680_81703745_81703901
ES.26255.1	chr5	+	7723	18	NNC	ENSMUSG00000037605.17	novel	4191	13	NA	NA	-89545	2806	intron_retention	FALSE	canonical	0	0	junction_1	1.0423555968629	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTGGGACATTG	NA	False	NA	NA	False	AATAAA	-19	NA	81704290	81947298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_81704438_81708709_81708791_81794256_81794560_81796475_81796580_81808108_81808295_81836355_81836540_81837411_81837535_81841339_81841549_81842297_81842475_81871908_81872119_81874515_81874737_81886873_81886941_81888901_81888994_81908473_81908643_81913984_81914111_81919430_81919528_81922239_81922279_81942110
ES.26255.2	chr5	+	2998	2	FSM	ENSMUSG00000037605.17_ENSMUSG00000106746.2	ENSMUST00000148830.2	241	2	-68	-2689	-68	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAAGACACCAATGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	81919436	81975669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_81919528_81972762
ES.26256.1	chr5	-	1734	1	Intergenic	novelGene_21811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAAGGTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	81775296	81773562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_81773600_81775300
ES.26257.1	chr5	+	1754	1	Intergenic	novelGene_21812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTCTCTATCTAGATG	NA	False	NA	NA	False	NA	NA	NA	82349140	82350894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_82349100_82350900
ES.26258.1	chr5	+	103	1	FSM	ENSMUSG00000106926.2	ENSMUST00000200912.2	799	1	758	-62	758	62	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTAC	NA	False	NA	NA	False	AATAAA	-22	NA	82485455	82485558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_82485500_82485600
ES.26259.1	chr5	-	172	1	Intergenic	novelGene_21813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATATGAAAAATAATGAA	NA	False	NA	NA	False	AATAAA	-11	NA	84107663	84107491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_84107500_84107700
ES.2626.1	chr10	+	182	1	Intergenic	novelGene_1993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTCCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	40008673	40008855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40008700_40008900
ES.26260.1	chr5	+	1173	1	FSM	ENSMUSG00000079067.6	ENSMUST00000120716.2	279	1	-96	-798	-96	798	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAACAGTCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	84271075	84272248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_84271100_84272200
ES.26260.2	chr5	+	1108	2	Genic_Genomic	ENSMUSG00000079067.6	novel	279	1	NA	NA	-96	790	multi-exon	FALSE	canonical	1	9	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCTTGGGAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	84271075	84272240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_84271262_84271318
ES.26261.1	chr5	-	181	1	Intergenic	novelGene_21814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	85592286	85592105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_85592100_85592300
ES.26262.1	chr5	+	178	1	Intergenic	novelGene_21815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	85906609	85906787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_85906600_85906800
ES.26263.1	chr5	+	235	1	Intergenic	novelGene_21816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTGGGTATAATAAACC	NA	False	NA	NA	False	AAAAAG	-37	NA	86034789	86035024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_86034800_86035000
ES.26264.1	chr5	+	180	1	Intergenic	novelGene_21817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAACC	2725	False	NA	NA	False	NA	NA	NA	86074470	86074650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_86074500_86074600
ES.26265.10	chr5	-	2990	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	37	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.8058973318226	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAAAGTGGCATCTTGT	NA	False	NA	-14	True	ATTAAA	-9	NA	86213344	86159890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.11	chr5	-	3043	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	2	-19	combination_of_known_splicesites	FALSE	canonical	3	7	junction_16	34.7976851634353	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	NA	False	NA	-25	True	NA	NA	NA	86213404	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86209862_86209907_86213186
ES.26265.12	chr5	-	3492	3	ISM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	46266	19	46205	-19	intron_retention	FALSE	canonical	3	147	junction_1	10.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	5594	False	NA	-25	True	NA	NA	NA	86167176	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_86160187_86161278_86161370_86164060
ES.26265.13	chr5	-	6133	18	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	3	-19	intron_retention	FALSE	canonical	2	4	junction_15	44.9825033266973	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	NA	False	NA	-25	True	NA	NA	NA	86213403	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86208383_86208756_86209862_86209907_86213186
ES.26265.14	chr5	-	3004	20	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	3	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	44.1246032210861	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	NA	False	NA	-25	True	NA	NA	NA	86213378	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185495_86185578_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206034_86206106_86209862_86209907_86213186
ES.26265.15	chr5	-	3061	19	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	30	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.2765091635416	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	NA	False	NA	-25	True	NA	NA	NA	86213351	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206034_86206106_86209862_86209907_86213186
ES.26265.16	chr5	-	2279	4	ISM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	45447	19	45386	-19	3prime_fragment	FALSE	canonical	3	146	junction_3	10.1434160364686	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	4775	False	NA	-25	True	NA	NA	NA	86167995	86159901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247
ES.26265.17	chr5	-	2950	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	28	214	-4	-214	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACGTTGTTTATATGT	NA	False	NA	NA	False	AATAAA	-27	NA	86213414	86160096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.18	chr5	-	2940	19	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-3	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.2765091635416	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACGTTGTTTATATGT	NA	False	NA	NA	False	AATAAA	-27	NA	86213413	86160096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200092_86206013_86206106_86209862_86209907_86213186
ES.26265.19	chr5	-	3246	18	NNC	ENSMUSG00000029253.13	novel	1469	7	NA	NA	0	-1890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2756988172636	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATTACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86213381	86161772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86162283_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.2	chr5	-	3631	20	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-61	6	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_17	42.8300125180833	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTGTGGTGGTGTTC	NA	False	NA	0	True	ATTAAA	-23	NA	86213503	86159876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86208383_86208756_86209862_86209907_86213186
ES.26265.20	chr5	-	3619	16	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-5	-3206	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	35.5262657136316	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGAAGAGGTATTCT	NA	False	NA	NA	False	AATAAA	-24	NA	86213415	86163088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86164216_86166247_86166344_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.21	chr5	-	3661	17	ISM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	101	3213	40	-3213	5prime_fragment	FALSE	canonical	3	99	junction_8	16.1201543106758	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTGGCAAAATGAGAAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	86213341	86163095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.22	chr5	-	2029	1	Intergenic	novelGene_21818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAAGAAACCAT	9691	False	NA	NA	False	NA	NA	NA	86188239	86186210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_86186200_86188200
ES.26265.23	chr5	-	4453	3	FSM	ENSMUSG00000029253.13	ENSMUST00000199141.2	1370	3	-14	-3069	11	3069	multi-exon	FALSE	canonical	3	136	junction_1	2.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAATCATAATTGCTTT	NA	False	NA	NA	False	AGTAAA	-41	NA	86213395	86201905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_86206106_86209862_86209907_86213186
ES.26265.24	chr5	-	2853	6	NNC	ENSMUSG00000029253.13	novel	1370	3	NA	NA	-1114	2990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.0599731583603	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATTGCAAACTCAAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	86214556	86201984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86204241_86206013_86206106_86209862_86209907_86213186_86213346_86213543_86213745_86214455
ES.26265.26	chr5	-	2885	5	NNC	ENSMUSG00000029253.13	novel	1370	3	NA	NA	36	2973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.6505448424405	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAGAAATAC	NA	False	NA	NA	False	AATAAA	-5	NA	86213345	86202001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86204241_86206034_86206106_86208383_86208756_86209862_86209907_86213186
ES.26265.27	chr5	-	1159	4	NNC	ENSMUSG00000029253.13	novel	1370	3	NA	NA	2	1539	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	64.3790856308682	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATACCTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	86213404	86203435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86204241_86206013_86206106_86209862_86209907_86213186
ES.26265.3	chr5	-	3402	21	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-1114	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	42.8712024557278	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTGTGGTGGTGTT	NA	False	NA	-1	True	ATTAAA	-22	NA	86214556	86159877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186_86213346_86213543_86213745_86214455
ES.26265.4	chr5	-	3029	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	9	5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	35.5796294893873	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCTGTGGTGGTGTT	NA	False	NA	-1	True	ATTAAA	-22	NA	86213397	86159877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.5	chr5	-	3124	20	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	40	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	43.5337294010962	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTCTGTGGTGGTGT	NA	False	NA	-2	True	ATTAAA	-21	NA	86213341	86159878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86208383_86208413_86209862_86209907_86213186
ES.26265.6	chr5	-	2990	19	NNC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	34.5293308848872	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213533	86159882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213479
ES.26265.7	chr5	-	3092	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	34.9146264747099	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213399	86159882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26265.8	chr5	-	3064	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	34.9586013196806	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213488	86159882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ES.26266.1	chr5	+	195	1	Intergenic	novelGene_21819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAACCAAAACCTAC	NA	False	NA	NA	False	NA	NA	NA	86281542	86281737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_86281500_86281700
ES.26267.1	chr5	+	213	1	Intergenic	novelGene_21820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATAGATCCTATTTC	NA	False	NA	NA	False	NA	NA	NA	86286451	86286664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_86286500_86286700
ES.26268.1	chr5	+	200	1	Intergenic	novelGene_21821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAAAAGACTTGATTT	NA	False	NA	NA	False	NA	NA	NA	86298885	86299085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_86298900_86299100
ES.26269.1	chr5	+	7309	2	Antisense	novelGene_ENSMUSG00000035898.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAAACCCTTAGACAA	NA	False	NA	NA	False	NA	NA	NA	86311692	86319130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_86317160_86317288
ES.26269.2	chr5	+	1806	1	Antisense	novelGene_ENSMUSG00000035898.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAACCAGAACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	86311692	86313498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_86311700_86313500
ES.2627.1	chr10	+	837	1	Antisense	novelGene_ENSMUSG00000019838.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40009324	40010161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_40009300_40010200
ES.26270.1	chr5	-	7442	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-20	903	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGGTTTGTGTGTCC	7132	False	NA	1	True	ATTAAA	-19	NA	86320618	86256242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.10	chr5	-	6549	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	32.2217537572446	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7100	False	NA	-6	True	NA	NA	NA	86320650	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297895_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.11	chr5	-	6179	1	NIC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	57044	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	NA	False	NA	-6	True	NA	NA	NA	86263326	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86257100_86263300
ES.26270.12	chr5	-	6476	31	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.6661394515279	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7112	False	NA	-6	True	NA	NA	NA	86320638	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.13	chr5	-	6492	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.2083487861402	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7175	False	NA	-6	True	NA	NA	NA	86320575	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285747_86288209_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.14	chr5	-	9342	30	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_27	24.8855644874154	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7083	False	NA	-6	True	NA	NA	NA	86320667	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.15	chr5	-	5814	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-75	-844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTAGGAGTCAGATGA	7013	False	NA	NA	False	ATTAAA	-16	NA	86320737	86257989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.16	chr5	-	5604	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-20	-935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCTGGAGTTGTAACT	7132	False	NA	NA	False	NA	NA	NA	86320618	86258080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312555_86312651_86318413_86318477_86320526
ES.26270.17	chr5	-	5447	31	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-7	-935	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	32.7281054888438	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCTGGAGTTGTAACT	7145	False	NA	NA	False	NA	NA	NA	86320605	86258080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.20	chr5	-	5603	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-13	-936	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCTGGAGTTGTAAC	7139	False	NA	NA	False	NA	NA	NA	86320611	86258081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.21	chr5	-	4273	1	NIC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	57993	-959	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86262377	86258104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_86258100_86262400
ES.26270.22	chr5	-	5705	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-81	-959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7007	False	NA	NA	False	NA	NA	NA	86320743	86258104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.26	chr5	-	5254	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-21	-1286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCTACTGTCTCCTC	7131	False	NA	NA	False	NA	NA	NA	86320619	86258431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.27	chr5	-	5142	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	8	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7096	False	NA	NA	False	AATATA	-36	NA	86320654	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.29	chr5	-	4832	28	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	29	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.7605950447823	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7117	False	NA	NA	False	AATATA	-36	NA	86320633	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86279102_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.3	chr5	-	6591	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGAGTTGCAACTAAT	7083	False	NA	-1	True	NA	NA	NA	86320667	86257142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.30	chr5	-	3316	20	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	30038	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.0401393521929	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	NA	False	NA	NA	False	AATATA	-36	NA	86290332	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86258599_86259127_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263
ES.26270.31	chr5	-	5128	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	29	-1433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7117	False	NA	NA	False	AATATA	-36	NA	86320633	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.32	chr5	-	5106	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-13	-1433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.2341201455984	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7139	False	NA	NA	False	AATATA	-36	NA	86320611	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288292_86289402_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.33	chr5	-	5058	33	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	25	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.251140397812	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7113	False	NA	NA	False	AATATA	-36	NA	86320637	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86258828_86258891_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279198_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.34	chr5	-	5118	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	25	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	32.301873477817	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7113	False	NA	NA	False	AATATA	-36	NA	86320637	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86294994_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.36	chr5	-	5108	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-23	-1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	38.2857431291479	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAAGTTGTGTTATTC	7129	False	NA	NA	False	AATATA	-36	NA	86320621	86258578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292191_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302287_86307058_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.38	chr5	-	4936	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-28	1444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGGGTTTTGTTTTTGT	7124	False	NA	NA	False	ATTAAA	-16	NA	86320626	86258756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.4	chr5	-	6298	30	ISM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	8695	-1	8403	1	3prime_fragment	FALSE	canonical	3	104	junction_13	11.3212731056388	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGAGTTGCAACTA	NA	False	NA	-3	True	NA	NA	NA	86311967	86257144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937
ES.26270.41	chr5	-	4670	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	1	1143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTACCTTTCCCATTGTT	7089	False	NA	NA	False	AATAAA	-17	NA	86320661	86259057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.42	chr5	-	4435	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	10	917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCAATGGTATCTCTTT	7098	False	NA	NA	False	ATTAAA	-21	NA	86320652	86259283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.44	chr5	-	6054	31	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-29	912	intron_retention	FALSE	non_canonical	0	0	junction_28	24.4737728100012	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAACTCCAATGGTATC	7123	False	NA	NA	False	ATTAAA	-16	NA	86320627	86259288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.45	chr5	-	4267	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	12	751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	224	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGACTGTAAAATCACTGA	7100	False	NA	NA	False	ATTAAA	-15	NA	86320650	86259449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.46	chr5	-	4080	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	9	561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATAGTATTTTT	7097	False	NA	NA	False	NA	NA	NA	86320653	86259639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.47	chr5	-	3751	30	ISM	ENSMUSG00000035898.14	ENSMUST00000113373.2	3504	33	8403	-509	8403	509	3prime_fragment	FALSE	canonical	3	104	junction_13	11.3212731056388	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTCTTTTTTTCCC	NA	False	NA	NA	False	TATAAA	-39	NA	86311967	86259691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937
ES.26270.48	chr5	-	3534	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTGTACTATTCAGA	7088	False	NA	NA	False	AATAAA	-20	NA	86320662	86260194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.49	chr5	-	3495	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAATTTGTACTATTCA	7132	False	NA	NA	False	AATAAA	-18	NA	86320618	86260196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.5	chr5	-	6548	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGAGTTGCAACTA	7131	False	NA	-3	True	NA	NA	NA	86320619	86257144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312548_86312651_86318413_86318477_86320526
ES.26270.50	chr5	-	3239	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-14	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	24.1545922926499	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTGGATTTCTTTTT	7138	False	NA	NA	False	NA	NA	NA	86320612	86260439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26270.6	chr5	-	6565	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	32.1939039349427	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTTGAGTTGCAACT	7128	False	NA	-4	True	NA	NA	NA	86320622	86257145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318499_86320526
ES.26270.8	chr5	-	6548	32	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	24.1545922926499	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTTGAGTTGCAACT	7123	False	NA	-4	True	NA	NA	NA	86320627	86257145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308255_86312555_86312651_86318413_86318477_86320526
ES.26270.9	chr5	-	6390	31	NNC	ENSMUSG00000035898.14	novel	6590	33	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	32.7281054888438	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTCTTGAGTTGCAA	7135	False	NA	-6	True	NA	NA	NA	86320615	86257147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308248_86312548_86312651_86318413_86318477_86320526
ES.26271.1	chr5	-	183	1	Intergenic	novelGene_21822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAATTTAAACTTA	NA	False	NA	NA	False	NA	NA	NA	86376781	86376598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_86376600_86376800
ES.26272.1	chr5	-	1950	12	NNC	ENSMUSG00000061259.12	novel	2716	10	NA	NA	-33605	-1251	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	1.49931113658824	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTCTTTGTCGGTACA	NA	False	NA	NA	False	CATAAA	-17	NA	86554884	86451326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_86451632_86454125_86454269_86457122_86457383_86474266_86474445_86475476_86475516_86478929_86479085_86485085_86485154_86486639_86486759_86487338_86487461_86521203_86521306_86545574_86545987_86554837
ES.26273.1	chr5	-	185	1	Intergenic	novelGene_21823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATAGCTATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	86591607	86591422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_86591400_86591600
ES.26274.1	chr5	+	3464	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86951956	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.10	chr5	+	5726	16	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-15	0	intron_retention	FALSE	canonical	3	145	junction_1	45.0049873779439	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952064	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.12	chr5	+	4757	16	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	32	junction_10	70.4222187160337	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952075	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.14	chr5	+	4742	19	NNC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	99.8030777130027	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952078	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86957163_86957200_86958971_86959040_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.16	chr5	+	5443	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-343	-2140	0	2138	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGCCTCCACTTTCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	86952079	86986656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.18	chr5	+	4657	17	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	78.1831783377985	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952083	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.19	chr5	+	4671	18	NIC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	75.8017812099563	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952083	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.2	chr5	+	3437	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86951959	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.20	chr5	+	4692	18	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	83.5898704149382	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952084	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.21	chr5	+	3504	18	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	72.8349796186926	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952084	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86956969_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.22	chr5	+	4398	18	NNC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	6	-460	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	86.6134474164168	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTAGAGTTATTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	86952085	86984053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86956969_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.25	chr5	+	7230	16	NIC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	100	junction_1	61.5010749680217	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952092	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86978496_86979522_86979560_86979655_86979696_86979806_86981502_86983542
ES.26274.26	chr5	+	3148	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	5	-147	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCATGGTTAATGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	86952096	86984366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.29	chr5	+	3283	18	NNC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	87.5813018233101	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952101	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981399_86981502_86983542
ES.26274.3	chr5	+	3382	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	-113	0	-101	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86951978	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.30	chr5	+	3245	17	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.3884942872519	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952105	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970462_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.31	chr5	+	3840	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-316	-564	15	562	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGATGTTAGGTCGT	NA	False	NA	NA	False	ATTAAA	-43	NA	86952106	86985080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.32	chr5	+	6307	15	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	15	60	intron_retention	FALSE	canonical	3	32	junction_10	82.5888513502091	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGAGTGGCATTATG	NA	False	NA	73	True	TATAAA	-2	NA	86952106	86984578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86981502_86983542
ES.26274.33	chr5	+	6713	15	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	15	0	intron_retention	FALSE	canonical	3	145	junction_1	44.9761841740397	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952106	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.35	chr5	+	3127	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-316	149	15	-146	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATGGTTAATGCTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	86952106	86984367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.37	chr5	+	2787	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	16	466	16	-461	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCCTAGAGTTATTTT	NA	False	NA	NA	False	CATAAA	-18	NA	86952107	86984052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.38	chr5	+	4747	16	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	16	0	intron_retention	FALSE	canonical	3	32	junction_10	80.5642324828801	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952107	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.39	chr5	+	3501	18	NNC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	81.5380693136945	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952110	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86956969_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.4	chr5	+	3291	16	FSM	ENSMUSG00000035851.15	ENSMUST00000119339.8	3222	16	-66	-3	-66	0	multi-exon	FALSE	canonical	0	0	junction_5	76.9910817346182	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952013	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.40	chr5	+	4735	16	NIC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	22	0	intron_retention	FALSE	canonical	3	32	junction_11	79.9145098770485	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTTGCTGTATTTCCT	NA	False	NA	8	True	AATAAA	-16	NA	86952113	86984513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979631_86979870_86981366_86981502_86983542
ES.26274.41	chr5	+	3335	18	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	78.447787497939	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952113	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981554_86983542
ES.26274.42	chr5	+	3840	18	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	22	560	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	74.2834280419321	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGGTGATGTTAGGTC	NA	False	NA	NA	False	ATTAAA	-41	NA	86952113	86985078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86957166_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.43	chr5	+	4216	18	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	85.7660776134956	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952113	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86976366_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.44	chr5	+	1610	1	NIC	ENSMUSG00000035851.15	novel	3222	16	NA	NA	22	-3881	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATCCTTTCAACCT	NA	False	NA	NA	False	TATAAA	-27	NA	86952113	86953723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952100_86953700
ES.26274.48	chr5	+	4696	11	NIC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	34	2090	intron_retention	FALSE	canonical	3	100	junction_1	65.641526490477	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATGGCAATTTCT	NA	False	NA	NA	False	ATTAAA	-27	NA	86952125	86978282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813
ES.26274.49	chr5	+	7022	14	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	34	-1	intron_retention	FALSE	canonical	2	2	junction_5	79.1683847005525	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952125	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968256_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.5	chr5	+	3366	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	-404	-2	-61	0	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952018	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.51	chr5	+	3232	17	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	72.0727713842058	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTTGCTGTATTTCCT	NA	False	NA	8	True	AATAAA	-16	NA	86952175	86984513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981554_86983542
ES.26274.52	chr5	+	4271	18	NNC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-122	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.307238483242	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952232	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86963792_86963940_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86976980_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.53	chr5	+	3948	18	NNC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	92.4471606305489	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952406	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86976366_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.54	chr5	+	3370	16	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	10936	0	-486	0	3prime_fragment	FALSE	canonical	3	183	junction_12	35.3738132898712	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86963027	86984518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.55	chr5	+	2537	14	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	12672	-56	1250	56	3prime_fragment	FALSE	canonical	3	183	junction_10	31.6023742647858	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCCATGGAGTGGCAT	NA	False	NA	69	True	AATATA	-14	NA	86964763	86984574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.56	chr5	+	5495	12	NNC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	1403	0	intron_retention	FALSE	canonical	1	4	junction_8	79.1018801168248	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86964916	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86976366_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.57	chr5	+	3185	15	NNC	ENSMUSG00000035851.15	novel	2960	17	NA	NA	1553	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.8677697186206	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86965066	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86976353_86977339_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.58	chr5	+	1618	13	ISM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	15518	460	-3103	-457	3prime_fragment	FALSE	canonical	3	72	junction_9	59.1637910099299	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGAGTTATTTTGTTT	NA	False	NA	NA	False	CATAAA	-22	NA	86967940	86984056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.59	chr5	+	1813	10	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	18361	2	-591	0	3prime_fragment	FALSE	canonical	3	183	junction_6	35.0336698718727	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86970452	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.6	chr5	+	4334	19	NNC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	89.4900677294538	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952032	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86976366_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.60	chr5	+	2556	2	FSM	ENSMUSG00000035851.15	ENSMUST00000148142.2	4006	2	3540	-2090	-2593	2090	multi-exon	FALSE	canonical	3	252	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATGGCAATTTCT	NA	False	NA	NA	False	ATTAAA	-27	NA	86974583	86978282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_86974671_86975813
ES.26274.61	chr5	+	2280	6	NIC	ENSMUSG00000035851.15	novel	593	7	NA	NA	-690	0	intron_retention	FALSE	canonical	3	32	junction_1	102.114837315642	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86976486	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86977339_86978412_86978496_86979522_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.62	chr5	+	3718	3	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-961	-1	intron_retention	FALSE	canonical	3	183	junction_1	61.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86978660	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86979560_86979655_86981502_86983542
ES.26274.63	chr5	+	1865	1	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	3030	0	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86982651	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86982700_86984500
ES.26274.7	chr5	+	4657	17	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	68.274234479414	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952059	86984516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.8	chr5	+	5113	16	NNC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	-18	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	91.2549542034112	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTGTATTTCCTTG	NA	False	NA	10	True	AATAAA	-18	NA	86952061	86984515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979653_86979696_86979806_86979870_86981366_86981502_86983542
ES.26274.9	chr5	+	1384	6	NNC	ENSMUSG00000035851.15	novel	3222	16	NA	NA	-17	-7888	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	91.4054702958198	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	86952062	86968304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968256
ES.26275.1	chr5	-	4888	1	Antisense	novelGene_ENSMUSG00000035851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAAGGTTCAAACTCAT	NA	False	NA	NA	False	AAGAAA	-3	NA	86962252	86957364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_86957400_86962300
ES.26275.2	chr5	-	2434	1	Intergenic	novelGene_21824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTGACTCCTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	86962252	86959818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_86959800_86962300
ES.26276.1	chr5	-	158	1	Intergenic	novelGene_21825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87502677	87502519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_87502500_87502700
ES.26277.1	chr5	+	4068	4	Fusion	ENSMUSG00000007457.4_ENSMUSG00000007907.5	novel	1603	3	NA	NA	19	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTGTGTGACATATT	NA	False	NA	NA	False	AATAAA	-20	NA	88117336	88129403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_88117416_88118497_88118572_88119298_88123065_88129254
ES.26278.1	chr5	+	2373	1	Intergenic	novelGene_21828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTCATGTAGCTTCGG	NA	False	NA	NA	False	NA	NA	NA	88312802	88315175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_88312800_88315200
ES.26279.1	chr5	-	5228	1	Intergenic	novelGene_21826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	88315653	88310425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88310400_88315700
ES.26279.2	chr5	-	4406	2	Intergenic	novelGene_21827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	112	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	88315512	88310431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88310643_88311317
ES.2628.1	chr10	-	5412	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	-15	0	-11	0	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTGATTGTGTTTCT	7128	False	NA	NA	False	AATAAA	-22	NA	40018265	39909527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
ES.2628.2	chr10	-	4795	4	NIC	ENSMUSG00000019838.12	novel	5397	6	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.5764535535124	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATCTTGTGATTGTGTT	7143	False	NA	NA	False	AATAAA	-19	NA	40018250	39909530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39913401_39916594_39916824_39932482_39932627_40017698
ES.2628.3	chr10	-	2506	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	-42	2933	-38	834	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCTGGCAATTTTATC	7101	False	NA	NA	False	AATAAA	-21	NA	40018292	39912460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
ES.2628.4	chr10	-	1859	4	NIC	ENSMUSG00000019838.12	novel	5397	6	NA	NA	2	830	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.5764535535124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATATCCTGGCAATTT	7145	False	NA	NA	False	AATAAA	-17	NA	40018248	39912464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_39913401_39916594_39916824_39932482_39932627_40017698
ES.2628.5	chr10	-	184	1	Intergenic	novelGene_1992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACAC	NA	False	NA	NA	False	NA	NA	NA	39915693	39915509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_39915500_39915700
ES.2628.6	chr10	-	2340	3	FSM	ENSMUSG00000019838.12	ENSMUST00000213488.2	2325	3	-18	3	-15	-3	multi-exon	FALSE	canonical	3	21	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGTTTGCTTCAGTTTTT	7124	False	NA	NA	False	AATAAA	-24	NA	40018269	39951389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_39953014_39956658_39956804_40017698
ES.2628.7	chr10	-	2347	2	NNC	ENSMUSG00000019838.12	novel	5397	6	NA	NA	25	15672	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAGTCTAGAAATA	7168	False	NA	NA	False	NA	NA	NA	40018225	39993225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_39995046_40017698
ES.26280.1	chr5	-	86	1	Intergenic	novelGene_21829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	88315742	88315656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88315700_88315700
ES.26281.1	chr5	+	177	1	Intergenic	novelGene_21830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTTGTTA	1689	False	NA	NA	False	NA	NA	NA	88570161	88570338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_88570200_88570300
ES.26282.1	chr5	+	3159	18	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	-19332	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	30.1032824199745	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88693566	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88693629_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.10	chr5	+	3502	17	NIC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-48	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	31.0357027268596	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTTGGTTGTCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	88712850	88799253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.11	chr5	+	5199	17	NIC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-46	0	intron_retention	FALSE	canonical	3	79	junction_11	16.3409713221093	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	NA	False	NA	11	True	AATAAA	-15	NA	88712852	88799251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88795106_88796114_88796184_88797690
ES.26282.12	chr5	+	3626	19	NIC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-39	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.3392852398412	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTATTGTGTTGGTTGT	NA	False	NA	8	True	AATAAA	-12	NA	88712859	88799248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88713336_88746294_88746349_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.13	chr5	+	2131	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-39	13596	-39	11422	5prime_fragment	FALSE	canonical	3	106	junction_1	12.4454364683963	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAGGCACAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	88712859	88776958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ES.26282.14	chr5	+	3516	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.0577299213976	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTTGGTTGTCTTCT	NA	False	NA	13	True	AATAAA	-17	NA	88712859	88799253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790848_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.15	chr5	+	2385	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-32	1183	-32	-1183	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCCCATCTTGGAGA	NA	False	NA	NA	False	AATAAA	-29	NA	88712866	88798068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.16	chr5	+	1321	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-32	14399	-32	10619	5prime_fragment	FALSE	canonical	3	106	junction_1	12.4454364683963	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAACATATGATATGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	88712866	88776155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ES.26282.17	chr5	+	1188	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-29	14529	-29	10489	5prime_fragment	FALSE	canonical	3	106	junction_1	12.4454364683963	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGTGGAGTCAGTATTCA	NA	False	NA	NA	False	CATAAA	-18	NA	88712869	88776025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ES.26282.19	chr5	+	3520	17	NIC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	30.9815973603686	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712884	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88796114_88796184_88797690
ES.26282.2	chr5	+	1703	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	-75	1	-75	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTTTGTAATACCTAT	NA	False	NA	19	True	AATAAA	-21	NA	88702245	88703948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88702200_88703900
ES.26282.20	chr5	+	3381	19	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-13	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4820533187238	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGGTTTAGTTATA	NA	False	NA	NA	False	AATAAA	-7	NA	88712885	88799003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88716332_88716413_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.21	chr5	+	3550	17	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.9815973603686	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712885	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793467_88796089_88796184_88797690
ES.26282.22	chr5	+	4389	7	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	-7	11306	-7	-9538	intron_retention	FALSE	canonical	3	106	junction_1	12.4454364683963	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACATGCTAATTAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	88712891	88779248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ES.26282.23	chr5	+	3537	17	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.9815973603686	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712892	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88796089_88796184_88797690
ES.26282.24	chr5	+	3546	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-4	3594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	38.5917322662246	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGCCTACGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	88712894	88802845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793485_88796114_88796184_88797690_88799240_88802823
ES.26282.25	chr5	+	2931	12	ISM	ENSMUSG00000029291.12	ENSMUST00000196894.5	3703	13	5	2277	5	-509	5prime_fragment	FALSE	canonical	3	79	junction_11	18.2371884160447	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTTTTTGAAGTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	88712903	88788277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839
ES.26282.26	chr5	+	3606	19	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4820533187238	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712906	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88716332_88716413_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.27	chr5	+	3270	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	8	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.0577299213976	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGGTTTAGTTATA	NA	False	NA	NA	False	AATAAA	-7	NA	88712906	88799003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790797_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.28	chr5	+	4009	18	NIC	ENSMUSG00000029291.12	novel	2077	14	NA	NA	-105	0	intron_retention	FALSE	canonical	1	1	junction_1	29.9036515111854	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	NA	False	NA	11	True	AATAAA	-15	NA	88731266	88799251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88732177_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.29	chr5	+	1694	7	ISM	ENSMUSG00000029291.12	ENSMUST00000031229.11	4049	13	-58	14398	-35	10621	5prime_fragment	FALSE	canonical	1	1	junction_1	48.7285565374373	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACATATGATATGTATG	NA	False	NA	NA	False	ATTAAA	-23	NA	88731336	88776157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_88732177_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883
ES.26282.3	chr5	+	1641	2	Genic_Genomic	ENSMUSG00000070697.5	novel	1629	1	NA	NA	-1	12833	multi-exon	FALSE	non_canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAAACAGAAGAGGTAAC	NA	False	NA	NA	False	NA	NA	NA	88702319	88716782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_88703941_88716762
ES.26282.30	chr5	+	3698	18	NIC	ENSMUSG00000029291.12	novel	2077	14	NA	NA	-35	-241	intron_retention	FALSE	canonical	1	1	junction_1	29.9036515111854	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTAGTTATAGTGGTTA	NA	False	NA	NA	False	AATAAA	-14	NA	88731336	88799010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88732177_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.31	chr5	+	2748	18	NIC	ENSMUSG00000029291.12	novel	2077	14	NA	NA	-34	-1190	intron_retention	FALSE	canonical	1	1	junction_1	29.9036515111854	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCTAAACAAGCCCATC	NA	False	NA	NA	False	AATAAA	-22	NA	88731337	88798061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88732177_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.32	chr5	+	3005	18	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	27795	-244	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.9036515111854	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTTAGTTATAGTGG	808	False	NA	NA	False	AATAAA	-11	NA	88759447	88799007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88759598_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.33	chr5	+	3422	18	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	28003	-244	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.9036515111854	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTTAGTTATAGTGG	1016	False	NA	NA	False	AATAAA	-11	NA	88759655	88799007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88760223_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.34	chr5	+	2480	11	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	-14935	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.4120042088646	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTATTGTGTTGGTTGT	NA	False	NA	8	True	AATAAA	-12	NA	88779614	88799248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88779715_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.35	chr5	+	3563	5	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-3700	-2	intron_retention	FALSE	canonical	0	0	junction_2	51.280478741915	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	8294	False	NA	9	True	AATAAA	-13	NA	88790849	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88790908_88791926_88792029_88793395_88795106_88796049_88796184_88797690
ES.26282.36	chr5	+	3106	1	Genic_Genomic	ENSMUSG00000029291.12	novel	NA	NA	NA	NA	4226	2630	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGGGAAGGAAGGGAAAA	4832	False	NA	NA	False	NA	NA	NA	88798775	88801881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_88798800_88801900
ES.26282.4	chr5	+	3424	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-128	240	-128	-240	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAGTTATAGTGGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	88712770	88799011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.5	chr5	+	3618	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	-79	-3	-79	3	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTTGGTTGTCTTCTC	NA	False	NA	14	True	AATAAA	-18	NA	88712819	88799254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.6	chr5	+	3600	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-75	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1032824199745	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712823	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713327_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.7	chr5	+	3346	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-63	-244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1032824199745	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTTAGTTATAGTGG	NA	False	NA	NA	False	AATAAA	-11	NA	88712835	88799007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713327_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.8	chr5	+	3421	17	NIC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-61	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.1351124106083	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTATTGTGTTGGTTGTC	NA	False	NA	9	True	AATAAA	-13	NA	88712837	88799249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88713336_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26282.9	chr5	+	3603	18	NNC	ENSMUSG00000029291.12	novel	3536	18	NA	NA	-50	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	29.6558110330451	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTATTGTGTTGGTTGT	NA	False	NA	8	True	AATAAA	-12	NA	88712848	88799248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790767_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ES.26283.1	chr5	-	1794	1	Intergenic	novelGene_21831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACTGGCTACACAAAC	NA	False	NA	NA	False	NA	NA	NA	88759669	88757875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88757900_88759700
ES.26284.1	chr5	+	6409	3	Antisense	novelGene_ENSMUSG00000044221.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAAGTATTATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	88804316	88841190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_88810348_88829459_88829619_88840971
ES.26284.2	chr5	+	6481	1	Antisense	novelGene_ENSMUSG00000044221.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAAACTAGACAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88804316	88810797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_88804300_88810800
ES.26284.3	chr5	+	182	1	Intergenic	novelGene_21832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAACCAAT	NA	False	NA	NA	False	NA	NA	NA	88813027	88813209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_88813000_88813200
ES.26284.4	chr5	+	179	1	Intergenic	novelGene_21833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATGTTCT	NA	False	NA	NA	False	NA	NA	NA	88814118	88814297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_88814100_88814300
ES.26284.5	chr5	+	4788	1	Antisense	novelGene_ENSMUSG00000044221.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATGTCTATTTTTTC	7719	False	NA	NA	False	AATAAA	-12	NA	88823583	88828371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_88823600_88828400
ES.26285.1	chr5	-	5591	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	-3053	0	3053	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCCAGATGTGTC	NA	False	NA	NA	False	TTTAAA	-39	NA	88824030	88804253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.10	chr5	-	2452	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	168.94311994804	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAGTTCTGTATATTT	NA	False	NA	-5	True	AATAAA	-29	NA	88824019	88807313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823684
ES.26285.11	chr5	-	2292	10	NIC	ENSMUSG00000044221.15	novel	2286	10	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	167.407759750531	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCAAAGTTCTGTATAT	NA	False	NA	-7	True	AATAAA	-27	NA	88823581	88807315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823404
ES.26285.13	chr5	-	4624	9	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	-30	-9	intron_retention	FALSE	canonical	3	432	junction_8	48.9130286835726	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGTGTAGAAGAATCAAAG	NA	False	NA	-17	True	AATAAA	-17	NA	88824060	88807325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.16	chr5	-	6703	9	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	48	-11	intron_retention	FALSE	canonical	3	432	junction_8	46.8573300028928	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTGTAGAAGAATCAA	NA	False	NA	-19	True	AATAAA	-15	NA	88823982	88807327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.17	chr5	-	2412	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	-60	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	168.94311994804	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTGTGTAGAAGAATCA	NA	False	NA	-20	True	AATAAA	-14	NA	88824090	88807328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821711_88823782
ES.26285.18	chr5	-	2344	10	FSM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	-70	12	-66	-12	multi-exon	FALSE	canonical	3	10	junction_9	165.873073593064	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTGTGTAGAAGAATCA	NA	False	NA	-20	True	AATAAA	-14	NA	88823595	88807328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823353
ES.26285.19	chr5	-	2112	5	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	1136	-12	intron_retention	FALSE	canonical	3	476	junction_4	24.7525251237121	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTGTGTAGAAGAATCA	NA	False	NA	-20	True	AATAAA	-14	NA	88818128	88807328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88811115_88811922_88812045_88813615_88813801_88818034
ES.26285.2	chr5	-	4298	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-50	-1710	-50	1710	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTGTGGTCTGTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	88824080	88805596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.22	chr5	-	2360	9	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	0	-12	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	176.486499129537	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTGTGTAGAAGAATCA	NA	False	NA	-20	True	AATAAA	-14	NA	88824030	88807328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88821551_88821709_88823616
ES.26285.24	chr5	-	3034	9	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	-212	-13	intron_retention	FALSE	canonical	3	432	junction_8	48.0310771792597	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCTGTGTAGAAGAATC	NA	False	NA	-21	True	AATAAA	-13	NA	88823741	88807329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88810470_88810978_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.25	chr5	-	2492	11	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	-105	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	208.719548677166	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCTGTGTAGAAGAATC	NA	False	NA	-21	True	AATAAA	-13	NA	88824135	88807329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820474_88820620_88821551_88821709_88823616_88823670_88823786
ES.26285.28	chr5	-	2376	9	NIC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	-6	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	169.076489716933	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACCTGTGTAGAAGAAT	NA	False	NA	-22	True	AATAAA	-12	NA	88824036	88807330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88820463_88820620_88821551_88821709_88823616
ES.26285.29	chr5	-	1766	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-49	821	-49	-811	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAAGTCTGGTCTGTGT	NA	False	NA	NA	False	TTTAAA	-29	NA	88824079	88808127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.3	chr5	-	3154	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-74	-542	-74	542	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTAGAGTTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	88824104	88806764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.30	chr5	-	1457	6	ISM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-72	6116	-72	320	5prime_fragment	FALSE	canonical	3	432	junction_5	58.8340037733282	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGTGTGCGTTATCT	NA	False	NA	NA	False	AATAAA	-14	NA	88824102	88813422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.4	chr5	-	3025	10	NNC	ENSMUSG00000044221.15	novel	2538	10	NA	NA	48	542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	167.685184162628	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTAGAGTTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	88823982	88806764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_88808319_88810393_88810463_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.5	chr5	-	2830	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-72	-220	-72	220	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAACAGTATTTGTTACT	NA	False	NA	-20	True	AATAAA	-27	NA	88824102	88807086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26285.8	chr5	-	4268	1	Genic_Genomic	ENSMUSG00000044221.15	novel	NA	NA	NA	NA	7898	208	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGGAGATTACCTAACA	NA	False	NA	-32	True	AATAAA	-15	NA	88811366	88807098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_88807100_88811400
ES.26285.9	chr5	-	2634	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	-96	0	-96	0	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	False	NA	2	True	AATAAA	-36	NA	88824126	88807306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ES.26286.1	chr5	-	131	1	Intergenic	novelGene_21834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88830063	88829932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88829900_88830100
ES.26287.1	chr5	-	171	1	Intergenic	novelGene_21835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAATGAATAT	NA	False	NA	NA	False	NA	NA	NA	88834972	88834801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88834800_88835000
ES.26288.1	chr5	+	180	1	Intergenic	novelGene_21836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	88855472	88855652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_88855500_88855700
ES.26289.1	chr5	-	964	2	Intergenic	novelGene_21837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAAGTAATAATGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	88868632	88863615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88863964_88868016
ES.26289.2	chr5	-	259	1	Intergenic	novelGene_21838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCTTTATTTGAACAAG	NA	False	NA	NA	False	AATAAA	-14	NA	88868587	88868328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88868300_88868600
ES.2629.1	chr10	-	177	1	Intergenic	novelGene_1994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAAGCTGGGG	3899	False	NA	NA	False	NA	NA	NA	40021494	40021317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40021300_40021500
ES.26290.1	chr5	+	5276	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	-36	-2535	-20	2535	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTAATTTGGATTGTG	NA	False	NA	NA	False	ATTAAA	-39	NA	88868693	88908383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ES.26290.10	chr5	+	7782	1	NIC	ENSMUSG00000006262.16	novel	8967	6	NA	NA	33296	-2166	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGCCTTCGCATTA	NA	False	NA	6	True	AATAAA	-17	NA	88902131	88909913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88902100_88909900
ES.26290.11	chr5	+	3023	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	79	-24	79	24	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAGTCATCTGGTTATT	NA	False	NA	51	True	AATGAA	-44	NA	88912933	88931164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ES.26290.13	chr5	+	1112	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	180	1786	180	-1786	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCAGGGAGTCTGGAGG	NA	False	NA	NA	False	AATAAA	-17	NA	88913034	88929354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ES.26290.14	chr5	+	2884	7	NNC	ENSMUSG00000029366.11	novel	3078	7	NA	NA	181	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.8586364698204	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCTGAGACTTTAAA	NA	False	NA	21	True	AATAAA	-18	NA	88913035	88931134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924825_88926220_88926312_88929078
ES.26290.15	chr5	+	2785	7	NNC	ENSMUSG00000029366.11	novel	3078	7	NA	NA	201	-8	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	74.1859525486837	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTCTGAGACTTTA	NA	False	NA	19	True	AATAAA	-16	NA	88913055	88931132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88913206_88917462_88917579_88920572_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ES.26290.16	chr5	+	2978	7	NNC	ENSMUSG00000029366.11	novel	3078	7	NA	NA	251	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6606332370886	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTAAATTTCTTGAAC	NA	False	NA	4	True	AATAAA	-31	NA	88913105	88931117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_88913380_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ES.26290.17	chr5	+	3744	1	NIC	ENSMUSG00000029366.11	novel	3078	7	NA	NA	10136	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATATATATGTCAATAAA	NA	False	NA	-16	True	AATAAA	-11	NA	88927353	88931097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88927400_88931100
ES.26290.2	chr5	+	6802	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	-28	-4069	-12	-2162	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTTCGCATTAGTTT	NA	False	NA	10	True	AATAAA	-21	NA	88868701	88909917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ES.26290.3	chr5	+	5966	1	NIC	ENSMUSG00000006262.16	novel	6258	2	NA	NA	8	-22466	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAGAATACCATTTACA	NA	False	NA	NA	False	NA	NA	NA	88868721	88874687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88868700_88874700
ES.26290.4	chr5	+	1555	5	NIC	ENSMUSG00000006262.16	novel	8967	6	NA	NA	-7	-1063	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	14.6969384566991	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAGTTCTACAAGCAG	NA	False	NA	NA	False	AATATA	-16	NA	88868722	88904785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88868981_88891162_88891330_88897383_88897518_88901018_88901183_88903953
ES.26290.5	chr5	+	3374	10	Fusion	ENSMUSG00000006262.16_ENSMUSG00000029366.11	novel	2705	6	NA	NA	-7	-6	multi-exon	FALSE	canonical	0	0	junction_4	83.7997318714588	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCTGAGACTTTAAA	NA	False	NA	21	True	AATAAA	-18	NA	88868722	88931134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ES.26290.6	chr5	+	6653	5	NIC	ENSMUSG00000006262.16	novel	8967	6	NA	NA	25	-2164	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	14.6969384566991	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCTTCGCATTAGT	NA	False	NA	8	True	AATAAA	-19	NA	88868754	88909915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88868981_88891162_88891330_88897383_88897518_88901018_88901183_88903953
ES.26290.7	chr5	+	5093	5	NIC	ENSMUSG00000006262.16	novel	8967	6	NA	NA	31	2513	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	14.6969384566991	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATTGGATCAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	88868760	88908361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_88868981_88891162_88891330_88897383_88897518_88901018_88901183_88903953
ES.26290.8	chr5	+	1491	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	44	1170	44	-1170	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTTTGACATAATTT	NA	False	NA	NA	False	TATAAA	-18	NA	88868773	88904678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ES.26290.9	chr5	+	5620	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	46	-2961	46	2961	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGGTACAAACTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	88868775	88908809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ES.26291.1	chr5	-	180	1	Intergenic	novelGene_21839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88884218	88884038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88884000_88884200
ES.26292.1	chr5	-	128	1	Intergenic	novelGene_21840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88919073	88918945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88918900_88919100
ES.26293.1	chr5	-	174	1	Intergenic	novelGene_21841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGAGCATACAC	NA	False	NA	NA	False	NA	NA	NA	88940312	88940138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_88940100_88940300
ES.26294.1	chr5	+	8061	26	FSM	ENSMUSG00000060961.17	ENSMUST00000148750.8	7931	26	-130	0	-130	0	multi-exon	FALSE	canonical	0	0	junction_1	1.52525407719501	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGAGTACCTCCAT	6415	False	NA	NA	False	AATAAA	-18	NA	89034546	89387512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_89035184_89082607_89082682_89102636_89102817_89176151_89176288_89186309_89186471_89194071_89194252_89232500_89232578_89270260_89270419_89277497_89277586_89280229_89280385_89281015_89281130_89283504_89283680_89297158_89297293_89304189_89304462_89318609_89318681_89327511_89327704_89345507_89345622_89347513_89347676_89362332_89362512_89363579_89363653_89371054_89371124_89373658_89373833_89376684_89376847_89380622_89380720_89382655_89382736_89383365
ES.26294.2	chr5	+	2817	2	Intergenic	novelGene_21845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGAAGGAAGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	89354130	89357020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_89356480_89356552
ES.26294.3	chr5	+	2776	2	Intergenic	novelGene_21844	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTACTCTGATCAAGG	NA	False	NA	NA	False	NA	NA	NA	89354130	89356975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_89356487_89356555
ES.26295.1	chr5	-	5351	1	Intergenic	novelGene_21842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1774	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCACCTAGCCCCTCTT	NA	False	NA	NA	False	NA	NA	NA	89357075	89351724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_89351700_89357100
ES.26295.10	chr5	-	3679	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1745	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAAGAAGTTCTGCTTTCC	NA	False	NA	NA	False	NA	NA	NA	89356998	89353251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89356493_89356560
ES.26295.11	chr5	-	2863	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1731	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATATTTTAATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	89356997	89354066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89356493_89356560
ES.26295.12	chr5	-	2600	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1724	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGACTCTTAATAACTTT	NA	False	NA	NA	False	NA	NA	NA	89356997	89354329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89356493_89356560
ES.26295.13	chr5	-	2296	1	Intergenic	novelGene_21846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAAAACATTATTGT	NA	False	NA	NA	False	NA	NA	NA	89356936	89354640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_89354600_89356900
ES.26295.14	chr5	-	92	1	Intergenic	novelGene_21847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	NA	False	NA	NA	False	NA	NA	NA	89357075	89356983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_89357000_89357100
ES.26295.2	chr5	-	4529	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	0	1770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89356961	89351752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89351965_89352644
ES.26295.3	chr5	-	3934	3	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	54.5	1774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89356997	89351752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89351965_89352644_89352794_89353424
ES.26295.4	chr5	-	4994	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89356961	89351752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89353210_89353424
ES.26295.5	chr5	-	5177	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89356997	89351752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89356493_89356560
ES.26295.6	chr5	-	3255	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	89355059	89351752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89354836_89354887
ES.26295.7	chr5	-	5038	2	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1774	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	89356997	89351753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89356588_89356793
ES.26295.8	chr5	-	4488	3	Antisense	novelGene_ENSMUSG00000060961.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1770	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	89356910	89351754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_89352320_89352918_89356487_89356555
ES.26295.9	chr5	-	3752	1	Intergenic	novelGene_21843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTGCTTTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	89356998	89353246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_89353200_89357000
ES.26296.1	chr5	+	2154	1	Antisense	novelGene_ENSMUSG00000035540.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGATTGTAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	89591641	89593795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_89591600_89593800
ES.26297.1	chr5	-	6364	23	NNC	ENSMUSG00000043635.13	novel	3934	22	NA	NA	-292	2226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.15350704913177	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCGGCCTGATCTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	90031485	89822719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_89825786_89831000_89831119_89832170_89832379_89834634_89834768_89839158_89839325_89840897_89841062_89842608_89842690_89846062_89846187_89848265_89848400_89849497_89849674_89850792_89850939_89853049_89853164_89854508_89854642_89855163_89855308_89855660_89855767_89856469_89856627_89858515_89858600_89869512_89869713_89923143_89923301_90009157_90009565_90029393_90029422_90030680_90030924_90031410
ES.26297.2	chr5	-	114	1	Intergenic	novelGene_21848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTATCTGTCTACTTT	NA	False	NA	NA	False	AATACA	-18	NA	89837344	89837230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_89837200_89837300
ES.26298.1	chr5	-	177	1	Intergenic	novelGene_21849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCATTTTTTATTAGG	5153	False	NA	NA	False	NA	NA	NA	90249638	90249461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_90249500_90249600
ES.26299.1	chr5	-	328	1	Intergenic	novelGene_21850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAAGTTTGTTCCT	7498	False	NA	NA	False	NA	NA	NA	90332265	90331937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_90331900_90332300
ES.263.1	chr1	+	4974	2	Antisense	novelGene_ENSMUSG00000102434.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	991	False	NA	NA	False	NA	NA	NA	36069648	36076953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36072762_36075092
ES.263.2	chr1	+	7168	1	Antisense	novelGene_ENSMUSG00000102434.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAAGTTCTGTGACTCT	1129	False	NA	NA	False	NA	NA	NA	36069786	36076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36069800_36077000
ES.2630.1	chr10	-	216	1	Intergenic	novelGene_1995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATGAGTACTTATAGG	NA	False	NA	NA	False	NA	NA	NA	40055451	40055235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40055200_40055500
ES.26300.1	chr5	+	197	1	Intergenic	novelGene_21851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTACAGTTGCTAGAA	NA	False	NA	NA	False	NA	NA	NA	90351443	90351640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_90351400_90351600
ES.26301.1	chr5	+	5054	1	Antisense	novelGene_ENSMUSG00000035505.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	750	False	NA	NA	False	NA	NA	NA	90367393	90372447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90367400_90372400
ES.26302.1	chr5	-	5852	4	NIC	ENSMUSG00000035505.15	novel	695	4	NA	NA	4	920	intron_retention	FALSE	canonical	3	63	junction_3	102.600628111571	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAACCAAATCTG	NA	False	NA	NA	False	NA	NA	NA	90371827	90361662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90366893_90367218_90367383_90370089_90370195_90371474
ES.26302.11	chr5	-	1145	6	NIC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	3	-124	combination_of_known_junctions	FALSE	canonical	3	63	junction_5	93.5534072067928	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGTAAGAGTATAAAAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	90371795	90362712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370195_90371474
ES.26302.2	chr5	-	6099	2	ISM	ENSMUSG00000035505.15	ENSMUST00000131068.2	645	3	-2318	-2810	1830	0	intron_retention	FALSE	canonical	3	252	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90369968	90362582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90365484_90366770
ES.26302.3	chr5	-	4995	1	FSM	ENSMUSG00000035505.15	ENSMUST00000200475.2	1293	1	-3696	-6	73	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90367577	90362582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90362600_90367600
ES.26302.4	chr5	-	1336	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	-32	3	-3	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90371863	90362585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ES.26302.6	chr5	-	3678	5	NIC	ENSMUSG00000035505.15	novel	1333	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_4	94.7110737981573	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90371860	90362585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90365484_90366770_90366896_90367218_90367383_90370089_90370195_90371474
ES.26302.8	chr5	-	749	4	NNC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	348	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.118749182771	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90367302	90362585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90363035_90365375_90365484_90366770_90366879_90367218
ES.26302.9	chr5	-	1101	5	NIC	ENSMUSG00000035505.15	novel	1333	6	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	110.663905588046	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTCTGGTGAGATAAT	NA	False	NA	-7	True	AATAAA	-13	NA	90371795	90362585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90363035_90365375_90365484_90366770_90366893_90370089_90370191_90371474
ES.26303.1	chr5	+	3192	2	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTATTATCCGGTCTCC	NA	False	NA	NA	False	AAAACA	-21	NA	90394682	90398236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90394781_90395142
ES.26304.1	chr5	+	5117	3	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAACCCAAAAAGATAT	NA	False	NA	NA	False	NA	NA	NA	90453641	90460225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454654_90454854_90455885_90457150
ES.26304.2	chr5	+	5064	3	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90453641	90460177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454669_90454874_90455885_90457150
ES.26304.4	chr5	+	6369	2	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAACAAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	90453641	90460214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454670_90454873
ES.26304.5	chr5	+	5063	4	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90453641	90461932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454660_90454864_90455885_90457150_90460163_90461919
ES.26304.6	chr5	+	6390	2	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAAAGATATTTTAACA	NA	False	NA	NA	False	NA	NA	NA	90453641	90460232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454654_90454854
ES.26304.7	chr5	+	6374	2	Antisense	novelGene_ENSMUSG00000055204.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90453641	90460212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_90454658_90454854
ES.26305.1	chr5	-	8253	26	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	50436	-1577	5825	2	3prime_fragment	FALSE	canonical	3	25	junction_19	37.9060733920041	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCAGGTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	90437166	90375022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096
ES.26305.100	chr5	-	2493	3	NIC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	-2	-6037	intron_retention	FALSE	canonical	1	45	junction_2	54.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTCTCATTTACTAAG	NA	False	NA	NA	False	NA	NA	NA	90514046	90446186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90448005_90451770_90451925_90513525
ES.26305.101	chr5	-	176	1	Intergenic	novelGene_21852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	9324	False	NA	NA	False	NA	NA	NA	90454857	90454681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_90454700_90454900
ES.26305.102	chr5	-	6597	1	Intergenic	novelGene_21853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACATTCTTGACCAAAAT	9698	False	NA	NA	False	NA	NA	NA	90462425	90455828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_90455800_90462400
ES.26305.14	chr5	-	8471	33	NNC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	8	-169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	52.0301801691816	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATGTGTCCTGCCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	90514036	90375846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406404_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433820_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445987_90446394_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.16	chr5	-	8493	33	NNC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	-8	-170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.2281092619793	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTCCTGCCCT	NA	False	NA	-3	True	AATAAA	-17	NA	90514052	90375847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380105_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445991_90446394_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.18	chr5	-	8478	33	NNC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	2	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	36.1448772087761	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATATGTGTCCTGCCC	NA	False	NA	-4	True	AATAAA	-16	NA	90514042	90375848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513534
ES.26305.2	chr5	-	6135	14	NIC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	-1512	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	43.4026149240863	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTGCAGGTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	90412694	90375024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485
ES.26305.25	chr5	-	5361	15	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	74920	-648	-1500	204	3prime_fragment	FALSE	canonical	3	118	junction_8	22.6856288231568	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCATTTAACTTGTTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	90412682	90375951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485
ES.26305.26	chr5	-	8676	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	374	261	-5	-93	multi-exon	FALSE	canonical	1	20	junction_19	38.5954031243672	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACACATCTCTTCAG	NA	False	NA	NA	False	ATTAAA	-22	NA	90514049	90376416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.27	chr5	-	8515	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	357	439	21	5	multi-exon	FALSE	canonical	1	20	junction_19	38.5954031243672	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTACTTGTATATTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	90514066	90376594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.28	chr5	-	7786	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	-1	272	-1	4	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTTGTATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	90514088	90376595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.29	chr5	-	8499	34	NNC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	21	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	45.6427215982395	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTTGTATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	90514066	90376595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436457_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.3	chr5	-	9297	33	NNC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	5	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	39.2133586931801	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTGAGACCGTGCAGG	NA	False	NA	NA	False	AATAAA	-6	NA	90514039	90375033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378828_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.30	chr5	-	7362	33	NIC	ENSMUSG00000055204.16	novel	8067	34	NA	NA	-45	3	combination_of_known_junctions	FALSE	canonical	1	30	junction_32	32.577536715312	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTACTTGTATATTT	5113	False	NA	NA	False	ATTAAA	-16	NA	90487647	90376596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90487507
ES.26305.32	chr5	-	6410	24	NIC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	6469	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	45.762599368318	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTCTACTTGTATATT	NA	False	NA	NA	False	ATTAAA	-15	NA	90436522	90376597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442
ES.26305.35	chr5	-	3305	11	NNC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	-1751	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.8869186352309	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTCTACTTGTATAT	NA	False	NA	NA	False	ATTAAA	-14	NA	90416294	90376598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90391943_90411240_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190
ES.26305.36	chr5	-	7574	32	NIC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	14	junction_1	36.6489093948716	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTTCTACTTGTATAT	NA	False	NA	NA	False	ATTAAA	-14	NA	90514044	90376598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.4	chr5	-	8160	32	NIC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	170	-165	combination_of_known_splicesites	FALSE	canonical	1	14	junction_1	36.6489093948716	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTCCTGCCCTGTCTC	NA	False	NA	2	True	AATAAA	-22	NA	90513874	90375842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.41	chr5	-	7697	34	NNC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	46.2711495831534	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACTTTTCTACTTGTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	90514061	90376600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401799_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525_90513584_90513637
ES.26305.47	chr5	-	7688	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	-36	405	-36	-129	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGAAAGTAAATTTCAG	NA	False	NA	1	True	AATAAA	-31	NA	90514123	90376728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.48	chr5	-	8391	34	FSM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	359	1708	10	-133	multi-exon	FALSE	canonical	1	25	junction_19	38.1218865865083	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTAAGCAGAAAGTAAATT	NA	False	NA	-3	True	AATAAA	-27	NA	90514077	90376732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.5	chr5	-	8543	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	-6	-480	-6	-166	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTCCTGCCCTGTCT	NA	False	NA	1	True	AATAAA	-21	NA	90514093	90375843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.52	chr5	-	4949	1	NIC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	11116	5453	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACATTCACCAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	90400066	90395117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90395100_90400100
ES.26305.53	chr5	-	5962	26	NIC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	20	9	intron_retention	FALSE	canonical	1	25	junction_11	39.5180971201803	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGACTCCTTTTTGTG	NA	False	NA	8	True	AATAAA	-22	NA	90514067	90400561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.55	chr5	-	5182	25	NNC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_24	37.5484871717742	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTCTCAAGAGACTCC	NA	False	NA	0	True	AATAAA	-14	NA	90514049	90400569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513526
ES.26305.57	chr5	-	4696	26	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	53	24246	10	1	5prime_fragment	FALSE	canonical	1	45	junction_25	30.7964673298741	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTCTCAAGAGACTCC	NA	False	NA	0	True	AATAAA	-14	NA	90514034	90400569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.58	chr5	-	5273	27	ISM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	562	24414	183	1	5prime_fragment	FALSE	canonical	1	20	junction_12	39.4757246955225	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTCTCAAGAGACTCC	NA	False	NA	0	True	AATAAA	-14	NA	90513861	90400569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.59	chr5	-	4713	25	NNC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	944	1	intron_retention	FALSE	canonical	0	0	junction_24	37.5484871717742	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTCTCAAGAGACTCC	NA	False	NA	0	True	AATAAA	-14	NA	90513100	90400569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513046
ES.26305.6	chr5	-	7323	25	NIC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	5768	-167	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	44.3311207154623	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTGTCCTGCCCTGTC	NA	False	NA	0	True	AATAAA	-20	NA	90437223	90375844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90377201_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096
ES.26305.60	chr5	-	5925	24	NNC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_20	42.6904273788874	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTCTCAAGAGACTCC	NA	False	NA	0	True	AATAAA	-14	NA	90514093	90400569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445991_90446394_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.62	chr5	-	3289	20	NNC	ENSMUSG00000055204.16	novel	4225	25	NA	NA	1872	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	41.8043855139559	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGTGCTTCTCAAGA	9037	False	NA	-6	True	AATAAA	-8	NA	90441119	90400575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436457_90436553_90437096_90437289_90438806_90439045_90441060
ES.26305.63	chr5	-	4794	25	NNC	ENSMUSG00000055204.16	novel	8067	34	NA	NA	-45	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	43.4536790412759	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGTGCTTCTCAAGA	5113	False	NA	-6	True	AATAAA	-8	NA	90487647	90400575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413288_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90487507
ES.26305.65	chr5	-	5312	26	ISM	ENSMUSG00000055204.16	ENSMUST00000218526.2	4938	27	-22	159	21	4	5prime_fragment	FALSE	canonical	1	25	junction_11	39.5180971201803	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATTGTTAAACT	NA	False	NA	0	True	AATAAA	-18	NA	90514066	90401210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.66	chr5	-	4557	25	NIC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	20	4	combination_of_known_splicesites	FALSE	canonical	1	34	junction_11	35.1954858216536	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGTGATTGTTAAACT	NA	False	NA	0	True	AATAAA	-18	NA	90514067	90401210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.70	chr5	-	4156	25	NIC	ENSMUSG00000055204.16	novel	8067	34	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	1	30	junction_24	33.0906792851938	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCGTGATTGTTAAA	5113	False	NA	-2	True	AATAAA	-16	NA	90487647	90401212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90487507
ES.26305.71	chr5	-	5024	26	NNC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	228	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	48.2062900460096	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCGTGATTGTTAAA	NA	False	NA	-2	True	AATAAA	-16	NA	90513816	90401212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441123_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.73	chr5	-	5264	26	NNC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	740	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	52.0586438547913	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCGTGATTGTTAAA	5898	False	NA	-2	True	AATAAA	-16	NA	90486862	90401212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433690_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90486368
ES.26305.77	chr5	-	3860	22	NNC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	44.6346214625662	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTCGTGATTGTTAA	NA	False	NA	-3	True	AATAAA	-15	NA	90514052	90401213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443558_90451879_90451925_90513525
ES.26305.79	chr5	-	4646	4	NNC	ENSMUSG00000055204.16	novel	1037	5	NA	NA	135	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.6192505851965	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTCGTGATTGTTAA	NA	False	NA	-3	True	AATAAA	-15	NA	90411047	90401213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90401802_90402498_90402671_90406292_90406508_90407376
ES.26305.8	chr5	-	9294	34	FSM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	343	821	-6	-168	multi-exon	FALSE	canonical	1	25	junction_19	38.1218865865083	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATGTGTCCTGCCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	90514093	90375845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.80	chr5	-	3191	19	ISM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	48745	25068	4134	-453	internal_fragment	FALSE	canonical	3	25	junction_11	40.0045136342277	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAGGAAAAATAAAAT	NA	False	NA	NA	False	AAGAAA	-32	NA	90438857	90401667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806
ES.26305.82	chr5	-	4649	25	ISM	ENSMUSG00000055204.16	ENSMUST00000218526.2	4938	27	-48	1545	-5	-1382	5prime_fragment	FALSE	canonical	1	25	junction_10	40.0166415035323	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	90514092	90402596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.84	chr5	-	4231	24	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	-340	26273	-4	-1382	5prime_fragment	FALSE	canonical	1	45	junction_23	31.4708134356053	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	90514427	90402596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.86	chr5	-	1622	1	NIC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	6964	-1382	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	90404218	90402596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90402600_90404200
ES.26305.87	chr5	-	4708	12	NNC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	-5063	-1382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.3697786259473	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	90431444	90402596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90402671_90406292_90406410_90407943_90408040_90408614_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90423892_90423973_90426101_90426251_90430709
ES.26305.91	chr5	-	3859	24	NNC	ENSMUSG00000055204.16	novel	9311	34	NA	NA	14	-1382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.6221018967176	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAACAAAGAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	90514073	90402596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436457_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.93	chr5	-	4748	22	ISM	ENSMUSG00000055204.16	ENSMUST00000218526.2	4938	27	-21	9653	-21	-2850	5prime_fragment	FALSE	canonical	1	25	junction_7	39.9307791081192	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATTTGAAATCTAGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	90514065	90410704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.94	chr5	-	3126	18	ISM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	46	36845	3	1910	5prime_fragment	FALSE	canonical	1	45	junction_17	29.5875920875007	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTCAAATATTTTAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	90514041	90413168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.95	chr5	-	3669	1	FSM	ENSMUSG00000055204.16	ENSMUST00000199965.2	2178	1	2002	-3493	-1020	3493	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGTTTGCTTCCTATA	NA	False	NA	NA	False	NA	NA	NA	90424379	90420710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90420700_90424400
ES.26305.96	chr5	-	2524	13	NNC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	-2936	771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.684069649705	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCCTTTTGAT	4229	False	NA	NA	False	AGTAAA	-22	NA	90445927	90423432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90423644_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845
ES.26305.97	chr5	-	5809	14	NIC	ENSMUSG00000055204.16	novel	4938	27	NA	NA	18	32	intron_retention	FALSE	canonical	1	45	junction_13	31.0841575737707	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAAAAGGTAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	90514069	90424171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ES.26305.98	chr5	-	5075	1	FSM	ENSMUSG00000055204.16	ENSMUST00000199965.2	2178	1	-2869	-28	-2869	28	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAAAAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	90429250	90424175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_90424200_90429200
ES.26305.99	chr5	-	3780	1	NIC	ENSMUSG00000055204.16	novel	10458	34	NA	NA	-4428	-2826	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCAGTCTGTCCTATG	NA	False	NA	NA	False	AATAAA	-13	NA	90430809	90427029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90427000_90430800
ES.26306.1	chr5	+	1870	1	FSM	ENSMUSG00000054945.5	ENSMUST00000238484.2	1869	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTCCAGGTGATTG	5664	False	NA	NA	False	AATAAA	-23	NA	90514479	90516349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_90514500_90516300
ES.26307.1	chr5	+	180	1	Intergenic	novelGene_21854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATCTGGTGGACGT	3956	False	NA	NA	False	NA	NA	NA	90550244	90550424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_90550200_90550400
ES.26308.1	chr5	+	184	1	Intergenic	novelGene_21855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGATTGTTCATAAA	NA	False	NA	NA	False	NA	NA	NA	90558521	90558705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_90558500_90558700
ES.26309.1	chr5	-	164	1	Intergenic	novelGene_21856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAATAAAGATCC	NA	False	NA	NA	False	NA	NA	NA	90721429	90721265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_90721300_90721400
ES.2631.1	chr10	+	174	1	Intergenic	novelGene_1996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40092394	40092568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40092400_40092600
ES.2631.2	chr10	+	302	1	Intergenic	novelGene_1997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGTACCCAGGCAACAAA	NA	False	NA	NA	False	NA	NA	NA	40092395	40092697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40092400_40092700
ES.26310.1	chr5	-	4027	11	NNC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_2	1.48323969741913	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCATGCCCTTCATTT	1305	False	NA	NA	False	ATTAAA	-17	NA	90788507	90750933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90752000_90752104_90754326_90754634_90754737_90756657_90756833_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90788245_90788305_90788428
ES.26310.2	chr5	-	4186	10	NNC	ENSMUSG00000029370.11	novel	1178	11	NA	NA	-41	-3	intron_retention	FALSE	canonical	0	0	junction_4	1.52347880008912	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCATGCCCTTC	1255	False	NA	NA	False	ATTAAA	-13	NA	90788557	90750937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90754326_90754634_90754737_90756657_90756852_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90783930_90783991_90788440
ES.26310.3	chr5	-	4362	9	NNC	ENSMUSG00000029370.11	novel	1919	11	NA	NA	-35	-4	intron_retention	FALSE	canonical	0	0	junction_2	1.6583123951777	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTTCATGCCCTT	1261	False	NA	NA	False	ATTAAA	-12	NA	90788551	90750938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90752000_90752104_90754737_90756657_90756813_90757550_90757672_90763653_90763840_90765565_90765645_90779366_90779466_90788428
ES.26310.4	chr5	-	5916	9	NIC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	3	-10	intron_retention	FALSE	canonical	0	0	junction_2	0.695970545353753	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACTCTGATTGTTCAT	1469	False	NA	NA	False	ATTAAA	-6	NA	90788343	90750944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90751808_90751901_90752000_90752104_90754326_90754634_90756852_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90788245
ES.26310.5	chr5	-	4110	9	NNC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	-39	-10	intron_retention	FALSE	canonical	0	0	junction_4	1.61535599791501	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACTCTGATTGTTCAT	1257	False	NA	NA	False	ATTAAA	-6	NA	90788555	90750944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90754326_90754634_90754737_90756657_90756833_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90788428
ES.26310.7	chr5	-	4072	10	NIC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	-42	-18	intron_retention	FALSE	canonical	0	0	junction_2	1.52347880008912	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCTAAACTCTGA	1384	False	NA	NA	False	NA	NA	NA	90788428	90750952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_90751808_90751901_90752000_90752104_90754326_90754634_90754737_90756657_90756852_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90788245
ES.26310.8	chr5	-	4383	8	NNC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	5	-18	intron_retention	FALSE	canonical	0	0	junction_3	1.72614942479922	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCTAAACTCTGA	1431	False	NA	NA	False	NA	NA	NA	90788381	90750952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90754737_90756657_90756852_90757573_90757672_90763653_90763797_90765565_90765645_90779366_90779466_90788301
ES.26310.9	chr5	-	2310	13	NNC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	-49	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.52752523165195	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCTAAACTCTGA	1377	False	NA	NA	False	NA	NA	NA	90788435	90750952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_90751808_90751901_90752000_90752104_90752224_90754273_90754326_90754634_90754737_90756657_90756833_90757573_90757672_90763653_90763797_90765565_90765645_90770005_90770147_90778213_90778384_90779366_90779455_90788245
ES.26311.1	chr5	+	700	2	FSM	ENSMUSG00000029376.9	ENSMUST00000202781.2	688	2	-12	0	-12	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATAGATGTCTTTCT	4482	False	NA	NA	False	AATAAA	-17	NA	91079102	91081280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_91079293_91080770
ES.26312.1	chr5	+	4885	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	32	151	32	-151	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGCTGTGGTGATTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	91665505	91774602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
ES.26312.2	chr5	+	1178	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	103	3787	103	-3787	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACAATCGCGAGCCCTC	NA	False	NA	NA	False	NA	NA	NA	91665576	91770966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
ES.26313.1	chr5	+	179	1	Intergenic	novelGene_21857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	92060811	92060990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92060800_92061000
ES.26314.1	chr5	-	1246	1	Intergenic	novelGene_21858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTTCTCCTATTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	92086987	92085741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92085700_92087000
ES.26315.1	chr5	-	2900	1	Intergenic	novelGene_21859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCTAAGAATAAATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	92094711	92091811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92091800_92094700
ES.26316.1	chr5	+	101	1	Intergenic	novelGene_21860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCAAACTCA	NA	False	NA	NA	False	AATAAA	-5	NA	92098506	92098607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92098500_92098600
ES.26317.1	chr5	+	2506	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	-20	-490	-6	490	multi-exon	TRUE	canonical	3	9	junction_1	7.48331477354788	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCCTGTCATTTC	NA	False	NA	NA	False	NA	NA	NA	92110742	92118934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
ES.26317.10	chr5	+	1885	2	ISM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	3321	-490	2892	490	3prime_fragment	FALSE	canonical	3	15	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGCCTGTCATTTC	1052	False	NA	NA	False	NA	NA	NA	92114083	92118934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92114434_92117399
ES.26317.11	chr5	+	3246	2	NNC	ENSMUSG00000102644.6	novel	3151	5	NA	NA	7951	2862	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	6111	False	NA	NA	False	NA	NA	NA	92119142	92122787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92120744_92121142
ES.26317.12	chr5	+	171	1	Intergenic	novelGene_21861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGGA	2882	False	NA	NA	False	NA	NA	NA	92140839	92141010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92140800_92141000
ES.26317.2	chr5	+	3495	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	-20	-1479	-6	-2	multi-exon	FALSE	canonical	3	9	junction_1	7.48331477354788	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTTGTGGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	92110742	92119923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
ES.26317.3	chr5	+	3003	5	NNC	ENSMUSG00000102644.6	novel	650	5	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.52268050859363	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	92110742	92119920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92110835_92111541_92111645_92112954_92113119_92114310_92114434_92117399
ES.26317.4	chr5	+	2463	5	Fusion	ENSMUSG00000096035.3_ENSMUSG00000102644.6	novel	650	5	NA	NA	4	1267	multi-exon	FALSE	canonical	1	1	junction_4	10.5918600821574	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTAATAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	92110752	92144446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_92110838_92111541_92111645_92112954_92113164_92114310_92114434_92142503
ES.26317.5	chr5	+	2886	4	NNC	ENSMUSG00000102644.6	novel	1996	4	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.58653778449403	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAATGTGTTGTGGGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	92110755	92119919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92110835_92112954_92113119_92114310_92114434_92117399
ES.26317.6	chr5	+	3580	5	FSM	ENSMUSG00000102644.6	ENSMUST00000191860.2	3151	5	-434	5	-5	-5	multi-exon	FALSE	canonical	2	3	junction_1	9.73075022801428	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	92110757	92119920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92111382_92111541_92111645_92112954_92113164_92114310_92114434_92117399
ES.26317.7	chr5	+	3292	5	NNC	ENSMUSG00000102644.6	novel	3151	5	NA	NA	0	-5	intron_retention	FALSE	canonical	1	1	junction_4	10.5918600821574	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	92110762	92119920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92111382_92111541_92111645_92112954_92113164_92114310_92114434_92117682
ES.26317.8	chr5	+	3017	5	NNC	ENSMUSG00000102644.6	novel	650	5	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	9.28372231381357	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGTGTTGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	92110773	92119920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92110835_92111541_92111645_92112954_92113164_92114310_92114434_92117399
ES.26317.9	chr5	+	2059	4	NNC	ENSMUSG00000102644.6	novel	1337	5	NA	NA	13	-1527	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	10.6144555520604	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAAGTTCTGTTGTTTGT	NA	False	NA	NA	False	TATAAA	-16	NA	92110775	92115998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92110835_92111541_92111645_92112954_92113164_92114310
ES.26318.1	chr5	-	3770	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-61	-1742	-61	1742	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTGGTATATTTATT	1274	False	NA	NA	False	NA	NA	NA	92110988	92095020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.11	chr5	-	1350	9	NNC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	-131	-294	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	108.401741222178	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTAATTTTCTTTTC	1537	False	NA	-10	True	ATTAAA	-14	NA	92110725	92097153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101094_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.12	chr5	-	3518	8	NIC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	1	-294	intron_retention	FALSE	canonical	3	329	junction_7	7.19977323905952	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTAATTTTCTTTTC	1669	False	NA	-10	True	ATTAAA	-14	NA	92110593	92097153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.13	chr5	-	3385	1	FSM	ENSMUSG00000029397.16	ENSMUST00000200905.2	1046	1	-404	-1935	-62	1935	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGGAT	1273	False	NA	NA	False	NA	NA	NA	92110989	92107604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92107600_92111000
ES.26318.14	chr5	-	1064	1	FSM	ENSMUSG00000029397.16	ENSMUST00000200905.2	1046	1	2	-20	2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGCTGGGGGTAT	1679	False	NA	NA	False	AAGAAA	-11	NA	92110583	92109519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92109500_92110600
ES.26318.2	chr5	-	2010	9	NNC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	111.5268325337	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTTTATGGATGAAT	1285	False	NA	NA	False	TATAAA	-17	NA	92110977	92096763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105504_92105736_92105857_92110488
ES.26318.3	chr5	-	2035	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-69	1	-69	-1	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTTTATGGATGAAT	1266	False	NA	NA	False	TATAAA	-17	NA	92110996	92096763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.4	chr5	-	3341	2	NNC	ENSMUSG00000029397.16	novel	1417	8	NA	NA	-49	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATACTGTTTTACAG	1286	False	NA	NA	False	AATAAA	-17	NA	92110976	92096863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92096976_92107747
ES.26318.5	chr5	-	1896	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-31	102	-31	-5	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAAATACTGTTTTACA	1304	False	NA	NA	False	AATAAA	-16	NA	92110958	92096864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.6	chr5	-	5451	7	NIC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	4	-279	intron_retention	FALSE	canonical	3	329	junction_6	6.72474700061067	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTCTCTCTCTC	1672	False	NA	5	True	ATTAAA	-29	NA	92110590	92097138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92105510_92105736_92105857_92110488
ES.26318.7	chr5	-	1642	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	-61	386	-61	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1274	False	NA	-5	True	ATTAAA	-19	NA	92110988	92097148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.8	chr5	-	2376	8	NIC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	-131	-291	intron_retention	FALSE	canonical	3	292	junction_4	18.6984665965213	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTAATTTTCTTTTCTTT	1537	False	NA	-7	True	ATTAAA	-17	NA	92110725	92097150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92097724_92099679_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ES.26318.9	chr5	-	5526	6	NIC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	1	-292	intron_retention	FALSE	canonical	3	329	junction_5	6.43117407632541	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTAATTTTCTTTTCTT	1669	False	NA	-8	True	ATTAAA	-16	NA	92110593	92097151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92097724_92099679_92099801_92100799_92100971_92101072_92105510_92105736_92105857_92110488
ES.26319.1	chr5	+	169	1	Intergenic	novelGene_21862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAAATGTTGGAGAAG	NA	False	NA	NA	False	AATAAA	-6	NA	92162643	92162812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92162600_92162800
ES.2632.1	chr10	+	1432	1	Antisense	novelGene_ENSMUSG00000038510.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCAGCTCAGTATACC	NA	False	NA	NA	False	NA	NA	NA	40109997	40111429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_40110000_40111400
ES.26320.1	chr5	+	179	1	Intergenic	novelGene_21863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTACATTTATT	NA	False	NA	NA	False	NA	NA	NA	92173433	92173612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92173400_92173600
ES.26321.1	chr5	+	2538	1	Antisense	novelGene_ENSMUSG00000029403.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTGGAAAAGCTGGTA	NA	False	NA	NA	False	NA	NA	NA	92190639	92193177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92190600_92193200
ES.26321.2	chr5	+	1717	1	Intergenic	novelGene_21865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92192102	92193819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92192100_92193800
ES.26322.1	chr5	-	4081	14	FSM	ENSMUSG00000029403.15	ENSMUST00000086978.12	4066	14	-23	8	-23	-8	multi-exon	FALSE	canonical	0	0	junction_13	2.30255839186089	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTTTTCCTCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	92190924	92153940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92155994_92156823_92156913_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
ES.26322.2	chr5	-	4144	13	FSM	ENSMUSG00000029403.15	ENSMUST00000113143.8	2513	13	9	-1640	9	-90	multi-exon	FALSE	canonical	0	0	junction_1	2.22984802670994	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACGATATATGGCTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	92190546	92154022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190045
ES.26322.3	chr5	-	3689	12	NIC	ENSMUSG00000029403.15	novel	3976	13	NA	NA	2	-90	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.25630429927106	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACGATATATGGCTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	92190898	92154022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92187096_92187296_92190657
ES.26322.4	chr5	-	3890	13	FSM	ENSMUSG00000029403.15	ENSMUST00000069937.11	3976	13	-4	90	-3	-90	multi-exon	FALSE	canonical	0	0	junction_1	2.51108652888656	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACGATATATGGCTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	92190904	92154022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
ES.26322.5	chr5	-	4231	14	FSM	ENSMUSG00000029403.15	ENSMUST00000113140.5	2559	14	-14	-1658	10	-91	multi-exon	FALSE	canonical	1	1	junction_2	2.00590843237005	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACGATATATGGCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	92190545	92154023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92155994_92156823_92156913_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190045
ES.26322.6	chr5	-	3937	12	NNC	ENSMUSG00000029403.15	novel	2559	14	NA	NA	37	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.18938083250769	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACGATATATGGCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	92190494	92154023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92155994_92156823_92156913_92167249_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190045
ES.26322.7	chr5	-	1417	9	ISM	ENSMUSG00000029403.15	ENSMUST00000113143.8	2513	13	9467	6	-2144	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	2.04633819296811	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCATGATTTTATGC	NA	False	NA	NA	False	ATTAAA	-30	NA	92181088	92155668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982
ES.26322.8	chr5	-	223	1	Intergenic	novelGene_21864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTTGTTTTTTTCTGT	NA	False	NA	NA	False	TTTAAA	-4	NA	92180307	92180084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92180100_92180300
ES.26323.1	chr5	+	8487	2	Antisense	novelGene_ENSMUSG00000088712.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACTTCTAACCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	92198780	92213521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92205930_92212183
ES.26323.2	chr5	+	6917	3	Antisense	novelGene_ENSMUSG00000088712.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACTTCTAACCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	92198780	92213521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92204256_92205825_92205930_92212183
ES.26323.3	chr5	+	7030	5	Antisense	novelGene_ENSMUSG00000088712.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGCTTTTGAAGACCC	NA	False	NA	NA	False	NA	NA	NA	92198782	92215519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92204256_92205825_92205930_92212183_92212365_92213610_92213714_92214350
ES.26323.4	chr5	+	1842	1	Antisense	novelGene_ENSMUSG00000029405.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCTGCAAGCAGGAAG	NA	False	NA	NA	False	NA	NA	NA	92213619	92215461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92213600_92215500
ES.26324.1	chr5	+	209	1	Intergenic	novelGene_21866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACATGCATGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	92222573	92222782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92222600_92222800
ES.26325.1	chr5	+	169	1	Intergenic	novelGene_21867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTTTATAGCCT	NA	False	NA	NA	False	NA	NA	NA	92234728	92234897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92234700_92234900
ES.26326.1	chr5	+	105	1	Intergenic	novelGene_21873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	637	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAATACAAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	92259205	92259310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92259200_92259300
ES.26327.1	chr5	+	181	1	Intergenic	novelGene_21875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTAAAGATA	NA	False	NA	NA	False	NA	NA	NA	92267334	92267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92267300_92267500
ES.26328.1	chr5	+	179	1	Intergenic	novelGene_21876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTGAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	92269175	92269354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92269200_92269400
ES.26329.1	chr5	+	222	1	Intergenic	novelGene_21878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTGTATACATATGT	NA	False	NA	NA	False	AATAAA	-11	NA	92281658	92281880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92281700_92281900
ES.2633.1	chr10	+	177	1	Intergenic	novelGene_1999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40130038	40130215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40130000_40130200
ES.26330.1	chr5	-	4602	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-46	-374	-46	356	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGGTAAGGTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	92231624	92199648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.10	chr5	-	4289	12	NIC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	1	7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	651.64171568419	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGTCCCTAATTTAAT	NA	False	NA	-11	True	AATAAA	-22	NA	92231575	92200015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92230608_92230712_92231387
ES.26330.100	chr5	-	3477	8	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	90	0	intron_retention	FALSE	canonical	3	261	junction_7	543.971037644394	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231282	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92204257_92205826_92205930_92212183_92212365_92213610_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.101	chr5	-	2023	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	646.185731814004	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231575	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92224833_92225014_92231387
ES.26330.102	chr5	-	2287	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-12	0	intron_retention	FALSE	canonical	3	524	junction_4	465.363771688343	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231590	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.103	chr5	-	3094	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	636.460252405884	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231576	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204383_92204420_92205545_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.104	chr5	-	3707	10	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	537.404209092762	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231577	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92203362_92204127_92204383_92204420_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.105	chr5	-	2124	13	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	681.896186909871	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231577	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92224833_92225014_92231387
ES.26330.106	chr5	-	1856	11	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-54033	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_10	509.365772309055	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92285611	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.107	chr5	-	5177	4	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	309	0	intron_retention	TRUE	non_canonical	0	0	junction_1	674.923370135866	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	276	False	NA	NA	False	AATGAA	-19	NA	92215073	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92204401_92204438_92205930_92212183_92212365_92213610
ES.26330.109	chr5	-	2153	11	NIC	ENSMUSG00000029405.17	novel	2716	12	NA	NA	96	-14	intron_retention	FALSE	canonical	3	261	junction_10	583.687150792272	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGACAT	NA	False	NA	NA	False	AATGAA	-5	NA	92231276	92202372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.110	chr5	-	3099	11	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	-24	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	511.198796946941	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGACAT	NA	False	NA	NA	False	AATGAA	-5	NA	92231541	92202372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92204522_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.112	chr5	-	2158	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	1	-15	intron_retention	FALSE	canonical	3	1117	junction_3	217.975590433175	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGACA	NA	False	NA	NA	False	AATGAA	-4	NA	92231575	92202373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.113	chr5	-	5541	2	Fusion	ENSMUSG00000088712.3_ENSMUSG00000029405.17	novel	697	5	NA	NA	-3900	-15	intron_retention	TRUE	canonical	0	0	junction_1	0	1607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGACA	7398	False	NA	NA	False	AATGAA	-4	NA	92207951	92202373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_92204406_92204442
ES.26330.117	chr5	-	8302	9	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-11	-16	intron_retention	FALSE	canonical	3	524	junction_2	408.405053225349	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGGAC	NA	False	NA	NA	False	AATGAA	-3	NA	92231589	92202374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92204257_92205826_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.118	chr5	-	1716	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-86	-16	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	510.187455745435	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGGAC	NA	False	NA	NA	False	AATGAA	-3	NA	92231208	92202374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
ES.26330.121	chr5	-	3617	9	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	71	-29	intron_retention	FALSE	canonical	3	261	junction_8	507.199171923614	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATGAACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92231301	92202387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.122	chr5	-	2113	13	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-53929	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	687.556098721325	1826	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATGAACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92285507	92202387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92247766_92248058_92285410
ES.26330.123	chr5	-	2347	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	16	-29	intron_retention	FALSE	canonical	0	0	junction_3	692.816684757004	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATGAACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92231560	92202387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92203362_92204127_92204257_92205826_92205930_92210349_92210469_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.124	chr5	-	1700	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	3	2479	1	-143	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAGGTGGACATTATT	NA	False	NA	NA	False	NA	NA	NA	92231575	92202501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.125	chr5	-	1629	11	ISM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-58	643	1	-643	5prime_fragment	FALSE	canonical	3	524	junction_4	465.363771688343	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTCCTAAAAGATTT	NA	False	NA	NA	False	AATACA	-18	NA	92231575	92203001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.126	chr5	-	177	1	Intergenic	novelGene_21868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	92236332	92236155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92236200_92236300
ES.26330.127	chr5	-	224	1	Intergenic	novelGene_21869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92240451	92240227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92240200_92240500
ES.26330.128	chr5	-	209	1	Intergenic	novelGene_21870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTAAATTATAGGCCC	9802	False	NA	NA	False	NA	NA	NA	92252993	92252784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92252800_92253000
ES.26330.129	chr5	-	171	1	Intergenic	novelGene_21871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAAAACTGT	8404	False	NA	NA	False	NA	NA	NA	92255260	92255089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92255100_92255300
ES.26330.13	chr5	-	4448	10	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-53953	6	intron_retention	FALSE	canonical	3	64	junction_9	536.234815894844	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGTCCCTAATTTAA	NA	False	NA	-12	True	AATAAA	-21	NA	92285531	92200016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.130	chr5	-	164	1	Intergenic	novelGene_21872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAATATTAAAAACA	7764	False	NA	NA	False	NA	NA	NA	92255900	92255736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92255700_92255900
ES.26330.131	chr5	-	170	1	Intergenic	novelGene_21874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	2248	False	NA	NA	False	NA	NA	NA	92261416	92261246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92261200_92261400
ES.26330.132	chr5	-	174	1	Intergenic	novelGene_21877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCGAGACAGGGTTT	7812	False	NA	NA	False	NA	NA	NA	92270407	92270233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92270200_92270400
ES.26330.133	chr5	-	209	1	Intergenic	novelGene_21879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCTTGGAGGCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	92282962	92282753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92282800_92283000
ES.26330.17	chr5	-	4163	11	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	17	6	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_6	520.440476903939	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGTCCCTAATTTAA	NA	False	NA	-12	True	AATAAA	-21	NA	92231559	92200016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213708_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.18	chr5	-	4125	11	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	23	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	517.734063009186	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATGTCCCTAATTTAA	NA	False	NA	-12	True	AATAAA	-21	NA	92231553	92200016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218325_92221083_92221138_92231387
ES.26330.19	chr5	-	4184	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	53	5	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	510.187455745435	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATGTCCCTAATTTA	NA	False	NA	-13	True	AATAAA	-20	NA	92231319	92200017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
ES.26330.2	chr5	-	4703	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-109	-2710	-48	356	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGGTAAGGTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	92231626	92199648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.20	chr5	-	4367	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-142	-2341	-81	5	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATGTCCCTAATTTA	NA	False	NA	-13	True	AATAAA	-20	NA	92231659	92200017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.21	chr5	-	4005	10	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	51	5	combination_of_known_splicesites	FALSE	canonical	3	103	junction_9	513.657930081686	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATGTCCCTAATTTA	NA	False	NA	-13	True	AATAAA	-20	NA	92231321	92200017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92231193
ES.26330.22	chr5	-	4364	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	646.185731814004	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTATGTCCCTAATTTA	NA	False	NA	-13	True	AATAAA	-20	NA	92231575	92200017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92224833_92225014_92231387
ES.26330.23	chr5	-	4241	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-54078	4	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_10	509.365772309055	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92285656	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.24	chr5	-	4298	12	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-54036	4	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	596.157212057024	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92285614	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.25	chr5	-	3958	12	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	503.721325291792	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231578	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202082_92202309_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.26	chr5	-	7488	7	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	-1	4	intron_retention	FALSE	canonical	3	1117	junction_1	239.405803791155	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231577	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92205930_92212183_92212365_92213610_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.27	chr5	-	4131	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-53974	4	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_6	665.104660936908	1874	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92285552	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213708_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.28	chr5	-	4220	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-703	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	526.950519498748	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92222082	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92221857
ES.26330.29	chr5	-	4071	12	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	654.159456892066	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	NA	False	NA	-14	True	AATAAA	-19	NA	92231578	92200018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92200669_92200732_92202913_92203242_92203362_92204178_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.3	chr5	-	4336	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	1	-155	-1	137	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTTGGTCTTGATA	NA	False	NA	NA	False	AAAAAG	-29	NA	92231577	92199867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.34	chr5	-	4302	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	653.684977329889	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231576	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92210349_92210469_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.35	chr5	-	4135	11	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-24	3	combination_of_known_splicesites	FALSE	canonical	2	37	junction_10	516.770316484993	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231146	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231005
ES.26330.39	chr5	-	4165	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	74	junction_10	604.784928714332	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231578	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92231387
ES.26330.4	chr5	-	4315	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	49	-132	5	132	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTACTGGTCTTTGGTCT	NA	False	NA	NA	False	AAAAAG	-24	NA	92231367	92199872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.40	chr5	-	3043	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.721325291792	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231575	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92201473_92202611_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.41	chr5	-	5703	10	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	40	3	intron_retention	FALSE	canonical	3	261	junction_9	461.05172308324	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231332	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.43	chr5	-	4162	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	633.435995188148	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATGTCCCTAATT	NA	False	NA	-15	True	AATAAA	-18	NA	92231575	92200019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.45	chr5	-	4514	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	1117	junction_3	217.975590433175	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATCTATGTCCCTAAT	NA	False	NA	-16	True	AATAAA	-17	NA	92231578	92200020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.46	chr5	-	6063	9	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	1117	junction_4	229.170753751433	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231575	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.47	chr5	-	4166	12	NNC	ENSMUSG00000029405.17	novel	2716	12	NA	NA	-84	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	596.734973081999	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231206	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
ES.26330.49	chr5	-	4058	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	551.697380816694	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231572	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.5	chr5	-	4386	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-60	-2442	-1	88	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGTTTTGGTAAAAAA	NA	False	NA	88	True	GATAAA	-18	NA	92231577	92199916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.50	chr5	-	4242	12	NNC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	609.558124741207	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231589	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204178_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.51	chr5	-	5170	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	592	junction_4	346.378636754636	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231577	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.52	chr5	-	4328	13	NIC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	686.531191126003	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTATGTCCCTAA	NA	False	NA	-17	True	AATAAA	-16	NA	92231139	92200021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92230608_92230712_92231005
ES.26330.53	chr5	-	3949	10	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	699.013555388795	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231208	92200022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
ES.26330.54	chr5	-	4163	11	NNC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_4	504.590170336284	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231589	92200022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205900_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.59	chr5	-	5420	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	1117	junction_4	219.529519373917	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231570	92200022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.6	chr5	-	4388	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-180	-26	-180	8	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGTTATATTTTCTCA	NA	False	NA	8	True	AATAAA	-41	NA	92231758	92199996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.60	chr5	-	3429	5	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	724.536230978134	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231575	92200022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92231387
ES.26330.63	chr5	-	4591	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	17	-1	intron_retention	FALSE	canonical	3	524	junction_4	465.363771688343	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTTATCTATGTCCCT	NA	False	NA	-19	True	AATAAA	-14	NA	92231559	92200023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.64	chr5	-	5092	12	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-682	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	737.538781723005	1657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTTATCTATGTCCC	NA	False	NA	-20	True	AATAAA	-13	NA	92222061	92200024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92215310_92215424_92215895_92215962_92216183_92216358_92218215_92218298_92221018
ES.26330.65	chr5	-	6621	10	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	524	junction_5	480.863061536876	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTTATCTATGTCCC	NA	False	NA	-20	True	AATAAA	-13	NA	92231541	92200024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.66	chr5	-	3923	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	1	258	-1	-258	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACTGTTATTTGCTGA	NA	False	NA	NA	False	AAAAAG	-11	NA	92231577	92200280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.67	chr5	-	3106	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-34	-1188	25	405	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCTGGATTGTTGTCT	NA	False	NA	NA	False	TTTAAA	-22	NA	92231551	92201170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.68	chr5	-	2776	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-12	1418	-12	135	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCTTGGAAAAGTCAAAC	NA	False	NA	NA	False	TATAAA	-14	NA	92231590	92201440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.69	chr5	-	2917	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	-200	-1	4	1	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231572	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.70	chr5	-	2757	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-89	-784	-28	1	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231606	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.71	chr5	-	2508	11	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	-78	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	510.187455745435	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231200	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
ES.26330.72	chr5	-	2640	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-10	1552	-10	1	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231588	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.75	chr5	-	3275	9	NIC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-2873	1	intron_retention	FALSE	canonical	3	592	junction_4	377.847501480425	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92218264	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215
ES.26330.76	chr5	-	6588	7	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	-3	1	intron_retention	FALSE	canonical	3	1117	junction_3	257.571133648336	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231581	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92204257_92205826_92205930_92212183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.77	chr5	-	3972	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	524	junction_5	463.309356693775	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231575	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.78	chr5	-	2431	10	NIC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	629.689694302766	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTCTTCAGTTAACA	NA	False	NA	-8	True	AGTAAA	-18	NA	92231359	92201574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92218215_92218298_92221018_92221138_92231193
ES.26330.79	chr5	-	5163	8	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1117	junction_2	223.594932584688	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231575	92201575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92203362_92204127_92205930_92212183_92212365_92213610_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.8	chr5	-	4305	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	-28	-1561	16	8	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	NA	False	NA	-10	True	AATAAA	-23	NA	92231400	92200014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.81	chr5	-	3718	9	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	1117	junction_2	228.690531887527	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-13	True	AGTAAA	-13	NA	92231575	92201579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.82	chr5	-	2561	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	96	1575	52	-4	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-13	True	AGTAAA	-13	NA	92231320	92201579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.84	chr5	-	3871	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1117	junction_4	219.529519373917	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-13	True	AGTAAA	-13	NA	92231578	92201579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.85	chr5	-	3295	11	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-53972	-19	intron_retention	FALSE	canonical	3	64	junction_10	622.591647872022	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATGCTTATTATTT	NA	False	NA	-28	True	TATAAA	-25	NA	92285550	92201594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ES.26330.86	chr5	-	2460	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	21	-27	combination_of_known_splicesites	FALSE	canonical	2	74	junction_9	521.979730934232	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGTAAAATGGATGCT	NA	False	NA	-36	True	TATAAA	-17	NA	92231555	92201602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92231387
ES.26330.87	chr5	-	2022	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	43	651	43	132	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGCCTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	92231329	92202226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.88	chr5	-	1961	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	49	2222	5	132	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTTGCCTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	92231367	92202226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.89	chr5	-	1975	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	1	2206	-1	130	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAATCTTGCCTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	92231577	92202228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.9	chr5	-	4175	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	46	11	2	7	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGTCCCTAATTTAAT	NA	False	NA	-11	True	AATAAA	-22	NA	92231370	92200015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.90	chr5	-	2042	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-98	-60	-37	60	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTTTAAGTGTTAA	NA	False	NA	NA	False	AAAACA	-22	NA	92231615	92202298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.91	chr5	-	2027	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	-181	2336	-181	0	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231759	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.92	chr5	-	1930	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	3	783	3	0	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231369	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.93	chr5	-	2175	11	NIC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	7	junction_10	525.021675743012	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231128	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92230608
ES.26330.94	chr5	-	3450	1	FSM	ENSMUSG00000088712.3	ENSMUST00000158087.3	129	1	-1757	-1564	-1757	1564	mono-exon	FALSE	NA	NA	NA	NA	NA	1607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	9541	False	NA	NA	False	AATGAA	-19	NA	92205808	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202400_92205800
ES.26330.95	chr5	-	1969	11	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	169	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	675.929286242281	1609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92230928	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213708_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92230608
ES.26330.96	chr5	-	5038	8	NNC	ENSMUSG00000029405.17	novel	4232	11	NA	NA	61	0	intron_retention	TRUE	non_canonical	0	0	junction_1	711.310604103583	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231311	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92204383_92204420_92205930_92212183_92212365_92213610_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.97	chr5	-	1838	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	40	2354	-4	0	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231376	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ES.26330.98	chr5	-	2941	9	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1117	junction_2	228.690531887527	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231577	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26330.99	chr5	-	1798	11	NIC	ENSMUSG00000029405.17	novel	1884	12	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	633.435995188148	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231550	92202358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92202913_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ES.26331.1	chr5	+	3985	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-82	-5	-82	2	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	15	True	AATAAA	-23	NA	92285714	92350659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.12	chr5	+	4000	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	134.441728826676	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285783	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314301_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.13	chr5	+	3837	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	134.057714061642	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	15	True	AATAAA	-23	NA	92285784	92350659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321862_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.14	chr5	+	3930	25	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	155.85213790285	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285788	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92331340_92331362_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.16	chr5	+	3591	13	FSM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	-15	-27	-6	27	multi-exon	FALSE	canonical	0	0	junction_12	129.019674425604	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTACAAGTGTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	92285790	92331941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756
ES.26331.18	chr5	+	3829	25	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	2	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	131.747443576294	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	15	True	AATAAA	-23	NA	92285798	92350659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335883_92335954_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.19	chr5	+	3451	19	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.589387342691	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285799	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300360_92318549_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.2	chr5	+	3949	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	134.571138452299	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGTCATTGTTCCC	NA	False	NA	12	True	AATAAA	-20	NA	92285737	92350656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340701_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.21	chr5	+	3910	25	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	155.85213790285	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCTCTGTCATTGTTC	NA	False	NA	10	True	AATAAA	-18	NA	92285799	92350654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329762_92329969_92331340_92331362_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.23	chr5	+	4835	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	3	-940	3	937	multi-exon	FALSE	canonical	0	0	junction_12	100.480471444838	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACCCATTAAATGCT	NA	False	NA	NA	False	NA	NA	NA	92285799	92351594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.24	chr5	+	3800	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	134.234199874246	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285804	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335894_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.25	chr5	+	4666	11	ISM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	-1	-4	0	4	intron_retention	FALSE	canonical	3	411	junction_7	26.9074339170423	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	92285804	92331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400
ES.26331.29	chr5	+	3562	22	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	104.728955857544	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTAATCTCTGTCATT	NA	False	NA	6	True	AATAAA	-14	NA	92285805	92350650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329358_92335560_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.3	chr5	+	3310	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-32	620	-32	-600	multi-exon	FALSE	canonical	0	0	junction_12	100.480471444838	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACCCCCTTTGAAGG	NA	False	NA	143	True	AATAAA	-24	NA	92285764	92350034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.32	chr5	+	3522	12	NNC	ENSMUSG00000029407.11	novel	3549	13	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	218.843579747486	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	92285807	92331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314301_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92325293_92325435_92328400_92328552_92329198_92329354_92329756
ES.26331.33	chr5	+	3968	25	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	156.061280476257	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285807	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92315764_92315843_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.35	chr5	+	3021	23	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	2	-729	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	159.93397398007	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGTAAAACTATTGATA	NA	False	NA	14	True	AATAAA	-23	NA	92285807	92349905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318549_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92347675_92347784_92348993_92349210_92349715
ES.26331.36	chr5	+	4283	12	NIC	ENSMUSG00000029407.11	novel	3549	13	NA	NA	2	27	intron_retention	FALSE	canonical	0	0	junction_11	134.226587751846	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTACAAGTGTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	92285807	92331941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92329354_92329756
ES.26331.37	chr5	+	3868	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	134.234199874246	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285807	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335656_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.38	chr5	+	4224	13	NNC	ENSMUSG00000029407.11	novel	3549	13	NA	NA	2	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	173.331089729069	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTACAAGTGTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	92285807	92331941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315843_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756
ES.26331.39	chr5	+	3774	23	NIC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	137.300508928649	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCATTGTTCCCTTT	NA	False	NA	15	True	AATAAA	-23	NA	92285807	92350659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335563_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.41	chr5	+	3789	23	NIC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	134.833329928116	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGTCATTGTTCCC	NA	False	NA	12	True	AATAAA	-20	NA	92285808	92350656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92347675_92347784_92348993_92349210_92349715
ES.26331.42	chr5	+	3965	12	ISM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	14	-27	-5	27	intron_retention	FALSE	canonical	3	411	junction_7	25.6553765730975	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTACAAGTGTTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	92285819	92331941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198
ES.26331.44	chr5	+	3861	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	133.938535123116	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285827	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343285_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.45	chr5	+	3863	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.480471444838	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285830	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329358_92329762_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.46	chr5	+	3943	25	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	174.080122038356	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92285833	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92331340_92331362_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349270_92349715
ES.26331.47	chr5	+	3829	24	NNC	ENSMUSG00000029407.11	novel	731	4	NA	NA	401	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.328801241953	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92286225	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286382_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.48	chr5	+	175	1	Intergenic	novelGene_21881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGCTTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	92301270	92301445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92301300_92301400
ES.26331.49	chr5	+	2603	19	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-14369	-723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	150.428698092739	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTATTGATATATGTT	NA	False	NA	20	True	AATAAA	-29	NA	92314878	92349911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335803_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.5	chr5	+	3290	24	NNC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-23	-605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.480471444838	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAAAAGTACCCCCTTT	NA	False	NA	138	True	AATAAA	-19	NA	92285773	92350029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329762_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.52	chr5	+	4483	2	ISM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	38660	0	-4782	0	intron_retention	FALSE	canonical	3	471	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACCAAAAAAAAAAAAAAAG	624	False	NA	NA	False	NA	NA	NA	92324465	92331914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92325435_92328400
ES.26331.53	chr5	+	5918	11	ISM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	45668	-3	2217	0	3prime_fragment	FALSE	canonical	3	375	junction_2	44.7728712503453	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	4653	False	NA	13	True	AATAAA	-21	NA	92331464	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.54	chr5	+	3351	4	ISM	ENSMUSG00000029407.11	ENSMUST00000201642.2	2427	12	58382	0	14959	0	3prime_fragment	FALSE	canonical	3	496	junction_3	15.121728296285	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTCTGTCATTGTTCC	NA	False	NA	11	True	AATAAA	-19	NA	92344206	92350655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.6	chr5	+	3782	23	NIC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	135.818493671298	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285774	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.8	chr5	+	3175	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	-20	743	-20	-723	multi-exon	FALSE	canonical	0	0	junction_12	100.480471444838	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTATTGATATATGTT	NA	False	NA	20	True	AATAAA	-29	NA	92285776	92349911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26331.9	chr5	+	2472	12	FSM	ENSMUSG00000029407.11	ENSMUST00000201642.2	2427	12	-43	-2	-15	0	multi-exon	FALSE	canonical	1	2	junction_2	139.72251130469	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285781	92350657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92286023_92300299_92300360_92335563_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ES.26332.1	chr5	-	3307	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	-2607	-64	-2607	64	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTAGGTCGTGGATGAT	NA	False	NA	NA	False	AATAAA	-40	NA	92291395	92288088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92288100_92291400
ES.26332.2	chr5	-	636	2	Genic_Genomic	ENSMUSG00000084111.5	novel	636	1	NA	NA	-37	64	multi-exon	FALSE	non_canonical	0	0	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTAGGTCGTGGATGAT	NA	False	NA	NA	False	AATAAA	-40	NA	92288825	92288088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_92288432_92288532
ES.26332.3	chr5	-	141	1	Intergenic	novelGene_21880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	92289524	92289383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92289400_92289500
ES.26333.1	chr5	-	177	1	Intergenic	novelGene_21882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	2137	False	NA	NA	False	NA	NA	NA	92325940	92325763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92325800_92325900
ES.26334.1	chr5	-	379	1	Intergenic	novelGene_21883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92328981	92328602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92328600_92329000
ES.26334.2	chr5	-	209	1	Intergenic	novelGene_21884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTAAGATGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	92328983	92328774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92328800_92329000
ES.26335.1	chr5	-	261	1	Intergenic	novelGene_21885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATCCAGCT	7482	False	NA	NA	False	NA	NA	NA	92355822	92355561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92355600_92355800
ES.26336.1	chr5	+	178	1	Intergenic	novelGene_21886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	92364078	92364256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92364100_92364300
ES.26337.1	chr5	-	176	1	Intergenic	novelGene_21887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGGAGCAAGCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	92366300	92366124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92366100_92366300
ES.26338.1	chr5	-	3121	15	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	2474	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.68429630559456	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACTTTTTCCTTGCCGC	NA	False	NA	NA	False	NA	NA	NA	92398544	92374109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92392462_92392613_92392687_92392821_92393241_92393409_92394593_92394641_92395616_92395732_92396956_92397133_92398147_92398206_92398333
ES.26338.2	chr5	-	2274	8	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	-11039	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25905486623571	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACATACTTTTTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	92387919	92374112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92387706
ES.26338.4	chr5	-	779	3	NNC	ENSMUSG00000029410.12	novel	732	3	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAATTACC	NA	False	NA	NA	False	NA	NA	NA	92376845	92374549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92375087_92376505_92376594_92376691
ES.26338.5	chr5	-	2110	11	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	6377	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.37259758654193	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92394641	92374561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92392462_92392613_92392687_92392821_92393241_92393409_92394593
ES.26338.6	chr5	-	685	3	FSM	ENSMUSG00000029410.12	ENSMUST00000201236.2	732	3	33	14	33	-14	multi-exon	FALSE	canonical	0	0	junction_2	11	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92376847	92374561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92375087_92376505_92376594_92376775
ES.26338.7	chr5	-	2506	15	NNC	ENSMUSG00000029410.12	novel	2274	16	NA	NA	2538	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.72498997414682	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92398480	92374561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92392462_92392613_92392687_92392725_92393241_92393409_92394593_92394641_92395616_92395729_92396956_92397133_92398147_92398206_92398333
ES.26338.8	chr5	-	174	1	Intergenic	novelGene_21888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	92388486	92388312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92388300_92388500
ES.26339.1	chr5	-	2408	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	5	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCTGAGTGTCCTA	9203	False	NA	-2	True	NA	NA	NA	92426024	92405518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ES.26339.2	chr5	-	3444	5	NNC	ENSMUSG00000029413.15	novel	2414	11	NA	NA	-4566	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.060661671157	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCTGAGTGTCCTA	NA	False	NA	-2	True	NA	NA	NA	92415207	92405518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92405545_92409520_92410435_92411268_92411332_92411449_92411623_92412939
ES.26339.3	chr5	-	2225	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	-11	200	-11	-195	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTCGGCTCCCTCC	9187	False	NA	NA	False	NA	NA	NA	92426040	92405717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ES.26339.4	chr5	-	1826	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	-14	602	-14	172	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAAAAAATGCTAGC	9184	False	NA	NA	False	AATAAA	-4	NA	92426043	92406119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ES.26339.5	chr5	-	1644	12	NNC	ENSMUSG00000029413.15	novel	2414	11	NA	NA	0	115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3830062171997	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTGAAAAATATATGAC	9203	False	NA	NA	False	AATAAA	-15	NA	92426024	92406176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92406198_92406303_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ES.26339.6	chr5	-	1771	11	FSM	ENSMUSG00000029413.15	ENSMUST00000159345.8	1629	11	-30	-112	-25	112	multi-exon	FALSE	canonical	1	1	junction_10	12.5892811550144	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACTTTTGAAAAATATAT	9173	False	NA	NA	False	AATAAA	-12	NA	92426054	92406179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424937_92425770
ES.2634.1	chr10	+	305	1	Intergenic	novelGene_2001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	40148518	40148823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40148500_40148800
ES.26340.1	chr5	+	175	1	Intergenic	novelGene_21889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACCTTAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	92427470	92427645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92427500_92427600
ES.26341.1	chr5	+	3044	1	FSM	ENSMUSG00000088623.3	ENSMUST00000157998.3	119	1	-1953	-972	-1953	972	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACGTCAGCTCATACTCC	NA	False	NA	NA	False	NA	NA	NA	92448079	92451123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92448100_92451100
ES.26342.1	chr5	-	5046	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	-24	-2	-24	2	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTCTCCATAA	NA	False	NA	-4	True	AATAAA	-19	NA	92457907	92431866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.10	chr5	-	5110	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	262	junction_12	31.5168209056688	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457871	92431868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.11	chr5	-	4972	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9183682265251	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457846	92431868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434732_92436338_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.13	chr5	-	5964	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	78.9691521046477	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAATCTCTCCA	NA	False	NA	-7	True	AATAAA	-16	NA	92457871	92431869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92442912_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.14	chr5	-	7075	20	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	82.175071537976	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTGTGAAATCTCTCCA	NA	False	NA	-7	True	AATAAA	-16	NA	92457847	92431869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438870_92438999_92439565_92439843_92440511_92440589_92441821_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.18	chr5	-	4939	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	34	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	77.7590324025538	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCCTTGTGAAATCTCTC	NA	False	NA	-9	True	AATAAA	-14	NA	92457814	92431871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446112_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.20	chr5	-	4650	19	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	-397	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	83.2721442020079	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTCCTTGTGAAATCT	NA	False	NA	-12	True	AATAAA	-11	NA	92452915	92431874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445183_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831
ES.26342.22	chr5	-	4865	23	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.1648043138411	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTCCTTGTGAAATCT	NA	False	NA	-12	True	AATAAA	-11	NA	92457844	92431874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92432350_92432459_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.24	chr5	-	4852	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	19	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	79.9445276426098	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATCGTCCTTGTGAAA	NA	False	NA	-15	True	AATAAA	-8	NA	92457829	92431877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92457650
ES.26342.25	chr5	-	5101	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	36	-16	intron_retention	FALSE	non_canonical	0	0	junction_4	122.791732310484	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTGGCAAATCGTCCT	NA	False	NA	-22	True	AATAAA	-1	NA	92457812	92431884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437981_92438116_92438212_92438871_92438999_92439134_92439191_92439565_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.26	chr5	-	5958	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	4	-671	intron_retention	FALSE	canonical	3	262	junction_13	31.2299535702505	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTGGAGTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	92457844	92432539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.27	chr5	-	4332	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	13	675	13	-675	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGGTTTGGAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	92457870	92432543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.28	chr5	-	5901	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	30	-770	intron_retention	FALSE	canonical	0	0	junction_16	104.801204749787	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTCTGAGTGTCCTGT	NA	False	NA	NA	False	TTTAAA	-7	NA	92457818	92432638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92449746_92450497_92450556_92451272_92451341_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.29	chr5	-	4188	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	15	817	15	-817	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTGTAGAGTATT	NA	False	NA	NA	False	TTTAAA	-4	NA	92457868	92432685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.30	chr5	-	2318	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	5	2697	5	34	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGTAGCAATTTGGT	NA	False	NA	-2	True	ATTAAA	-35	NA	92457878	92434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.31	chr5	-	2345	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	39	34	intron_retention	FALSE	canonical	3	262	junction_12	29.9337184459265	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGTAGCAATTTGGT	NA	False	NA	-2	True	ATTAAA	-35	NA	92457809	92434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.32	chr5	-	3923	21	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	1	32	intron_retention	FALSE	non_canonical	0	0	junction_5	80.7489164013982	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATTTGTAGCAATTTG	NA	False	NA	-4	True	ATTAAA	-33	NA	92457847	92434567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438202_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.34	chr5	-	3874	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	42	14	intron_retention	FALSE	canonical	3	262	junction_13	31.2299535702505	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTGTAAACCACAGT	NA	False	NA	-22	True	ATTAAA	-15	NA	92457806	92434585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.37	chr5	-	182	1	Intergenic	novelGene_21890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	92446460	92446278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92446300_92446500
ES.26342.38	chr5	-	2163	3	NIC	ENSMUSG00000029415.5	novel	996	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	342	junction_1	23.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAATAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	92452525	92449493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92449746_92450497_92451626_92451742
ES.26342.4	chr5	-	4906	23	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.1648043138411	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTCTCCATAA	NA	False	NA	-4	True	AATAAA	-19	NA	92457847	92431866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92433440_92433519_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.6	chr5	-	5081	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_12	29.9337184459265	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457848	92431868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.7	chr5	-	6652	21	NIC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	16	0	intron_retention	FALSE	canonical	3	262	junction_13	31.2299535702505	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457867	92431868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26342.8	chr5	-	4967	22	NNC	ENSMUSG00000029415.5	novel	5020	22	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.4156845130028	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457836	92431868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92434730_92436325_92436488_92437598_92437684_92437785_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ES.26343.1	chr5	+	2346	1	NIC	ENSMUSG00000034842.17	novel	714	4	NA	NA	664	-11920	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAGGCATATTTTGCG	NA	False	NA	NA	False	AATAAA	-20	NA	92480363	92482709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92480400_92482700
ES.26344.1	chr5	-	172	1	Intergenic	novelGene_21891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	92528182	92528010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92528000_92528200
ES.26344.2	chr5	-	156	2	Antisense	novelGene_ENSMUSG00000034842.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	92548227	92528026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_92528164_92548208
ES.26344.3	chr5	-	157	2	Antisense	novelGene_ENSMUSG00000034842.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	92548228	92528026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_92528134_92548178
ES.26345.1	chr5	+	3756	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	-1184	-2428	-1184	2428	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGAACTCTAAATGCTG	4906	False	NA	NA	False	TATAAA	-34	NA	92576459	92580215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92576500_92580200
ES.26345.2	chr5	+	1351	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	-1184	-23	-1184	23	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACACACAGGTGAGGT	4906	False	NA	NA	False	NA	NA	NA	92576459	92577810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92576500_92577800
ES.26345.3	chr5	+	2349	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	-1184	-1021	-1184	1021	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTTTCAATGAGAAATC	4906	False	NA	NA	False	NA	NA	NA	92576459	92578808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92576500_92578800
ES.26345.4	chr5	+	393	1	Intergenic	novelGene_21892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAGGGAAAACACTGT	4906	False	NA	NA	False	AAGAAA	-2	NA	92576459	92576852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92576500_92576900
ES.26345.5	chr5	+	3671	2	Genic_Genomic	ENSMUSG00002076272.1	novel	144	1	NA	NA	-1184	2428	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGAACTCTAAATGCTG	4906	False	NA	NA	False	TATAAA	-34	NA	92576459	92580215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_92578812_92578896
ES.26346.1	chr5	+	669	2	Antisense	novelGene_ENSMUSG00000034826.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCCTTCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	92582635	92583914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92582842_92583451
ES.26347.1	chr5	-	2408	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	-36	-20	-36	20	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGTCAGTGCTGAC	NA	False	NA	20	True	AATAAA	-45	NA	92583114	92563378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.10	chr5	-	2355	12	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-120	-6	combination_of_known_splicesites	FALSE	canonical	2	9	junction_11	170.001507042421	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92582736	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582511
ES.26347.12	chr5	-	2942	13	NNC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.409546993801	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92582955	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92563753_92563935_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92569438_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.14	chr5	-	2482	13	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	26	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	217.081206003652	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92583052	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582080_92582243_92582862
ES.26347.17	chr5	-	4976	5	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-307	-6	intron_retention	FALSE	canonical	3	493	junction_3	40.2329156288728	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92573097	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92565423_92565639_92567484_92570340_92570435_92570835_92570891_92572132
ES.26347.18	chr5	-	3722	9	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-18	-7	intron_retention	FALSE	canonical	3	22	junction_5	199.70568187961	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAATTCTGTCTGGTGT	NA	False	NA	-7	True	AATAAA	-18	NA	92583000	92563405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.19	chr5	-	3929	1	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-1503	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAATTCTGTCTGGTGT	NA	False	NA	-7	True	AATAAA	-18	NA	92567334	92563405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92563400_92567300
ES.26347.2	chr5	-	2335	13	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	217.620512590151	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTCTGGTGTTTTAT	NA	False	NA	-2	True	AATAAA	-23	NA	92583001	92563400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92579888_92579951_92582862
ES.26347.20	chr5	-	2192	12	NNC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	172.433386347519	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTAATTCTGTCTGGTG	NA	False	NA	-8	True	AATAAA	-17	NA	92582932	92563406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578976_92582862
ES.26347.22	chr5	-	2067	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	78	207	-18	-207	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTTGTGTGGTTTTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	92583000	92563605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.23	chr5	-	1830	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-10	-216	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	179.096761556428	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTTAATGATTTGTG	NA	False	NA	NA	False	AGTAAA	-10	NA	92582960	92563614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.24	chr5	-	1954	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	-6	404	-6	265	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTAGTCACGGAGCCT	NA	False	NA	NA	False	NA	NA	NA	92583084	92563802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.25	chr5	-	805	4	FSM	ENSMUSG00000034826.15	ENSMUST00000122893.2	631	4	-87	-87	41	87	multi-exon	FALSE	canonical	3	581	junction_1	53.8908361618395	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGAATTGTGTATGATT	NA	False	NA	NA	False	TATAAA	-28	NA	92583037	92575792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.26	chr5	-	2545	3	ISM	ENSMUSG00000034826.15	ENSMUST00000122893.2	631	4	-19	579	4	-308	5prime_fragment	FALSE	canonical	3	648	junction_2	32.5	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTACTCAGAGGGGTCCA	NA	False	NA	NA	False	NA	NA	NA	92582969	92576458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_92578813_92578897_92578982_92582862
ES.26347.27	chr5	-	3224	1	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	29	-1059	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTCTTATTTTATAGAG	NA	False	NA	NA	False	NA	NA	NA	92583049	92579825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92579800_92583000
ES.26347.3	chr5	-	2261	13	NNC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	215.823793225451	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTCTGGTGTTTTAT	NA	False	NA	-2	True	AATAAA	-23	NA	92582912	92563400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92581220_92581298_92582862
ES.26347.4	chr5	-	2129	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	182.323366577079	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGTCTGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	92582978	92563401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.5	chr5	-	5683	10	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	487	junction_1	66.8281377864145	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGTCTGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	92582971	92563401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.6	chr5	-	4801	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	20	-5	intron_retention	FALSE	canonical	3	487	junction_1	66.2253727811328	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTCTGTCTGGTGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	92583058	92563403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92578813_92578897_92578982_92582862
ES.26347.7	chr5	-	3370	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	493	junction_4	60.0153313745746	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92582988	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.8	chr5	-	2164	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	179.096761556428	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92583084	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ES.26347.9	chr5	-	2287	12	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	89	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	171.081779294616	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	False	NA	-6	True	AATAAA	-19	NA	92582527	92563404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582370
ES.26348.1	chr5	+	1799	1	Intergenic	novelGene_21893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	92647885	92649684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92647900_92649700
ES.26349.1	chr5	-	4738	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-27	-13	-27	13	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTCTCATTGGATGGCA	NA	False	NA	2	True	ATTAAA	-29	NA	92653523	92589159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ES.26349.3	chr5	-	4921	2	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	57381	3	57381	-3	3prime_fragment	FALSE	canonical	3	142	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCACTGTGAACTGT	NA	False	NA	-14	True	ATTAAA	-13	NA	92596115	92589175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_92592144_92594162
ES.26349.5	chr5	-	2122	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	35	2541	35	-2541	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTATGTGTTTCTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	92653461	92591713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ES.26349.6	chr5	-	2047	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	-22	2673	-22	-2673	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTGGGCCCTGGGAGC	NA	False	NA	-2	True	AATAAA	-18	NA	92653518	92591845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ES.26349.7	chr5	-	2980	12	NNC	ENSMUSG00000029426.9	novel	4698	12	NA	NA	-21	-2677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.65767483034	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGGGCCCTGG	NA	False	NA	-6	True	AATAAA	-14	NA	92653517	92591849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92592144_92594162_92594322_92595465_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ES.26349.9	chr5	-	7822	3	NNC	ENSMUSG00000029426.9	novel	4698	12	NA	NA	-22	-30688	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGTTTCTGTTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	92653518	92619860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92623960_92629958_92633214_92653050
ES.2635.1	chr10	+	2247	2	Intergenic	novelGene_2002	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCCATCACATGGTGG	NA	False	NA	NA	False	NA	NA	NA	40159560	40162363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40161755_40162310
ES.2635.2	chr10	+	7482	1	Antisense	novelGene_ENSMUSG00000075232.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGGACAACTAATGGCT	NA	False	NA	NA	False	NA	NA	NA	40159560	40167042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_40159600_40167000
ES.26350.1	chr5	-	160	1	Intergenic	novelGene_21894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCGT	NA	False	NA	NA	False	NA	NA	NA	92721244	92721084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92721100_92721200
ES.26351.1	chr5	+	184	1	Intergenic	novelGene_21895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	92726987	92727171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92727000_92727200
ES.26352.1	chr5	-	148	1	Intergenic	novelGene_21896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	92795912	92795764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92795800_92795900
ES.26353.1	chr5	+	174	1	Intergenic	novelGene_21897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGTTTAAAAATGG	5926	False	NA	NA	False	NA	NA	NA	92815330	92815504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92815300_92815500
ES.26354.1	chr5	-	3974	10	NNC	ENSMUSG00000050050.18	novel	3352	10	NA	NA	27	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1.9436506316151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGGTCATGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	92823097	92799903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92802032_92805727_92805843_92807541_92807653_92809391_92809469_92809783_92810112_92810491_92810602_92814539_92814758_92816530_92816668_92820531_92820576_92822391
ES.26354.2	chr5	-	3043	9	NNC	ENSMUSG00000050050.18	novel	3353	10	NA	NA	24	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.99608992783391	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGGTCATGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	92823100	92799903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_92802032_92807541_92807653_92809391_92809469_92809957_92810112_92810491_92810602_92814539_92814758_92816530_92816668_92820531_92820576_92823036
ES.26354.3	chr5	-	3370	10	FSM	ENSMUSG00000050050.18	ENSMUST00000150359.2	3353	10	-8	-9	-8	9	multi-exon	FALSE	canonical	1	1	junction_4	1.68508343201146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGGTCATGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	92823138	92799903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_92802032_92805727_92805843_92807541_92807653_92809391_92809469_92809783_92810112_92810491_92810602_92814539_92814758_92816530_92816668_92820531_92820576_92823036
ES.26355.1	chr5	+	7374	11	FSM	ENSMUSG00000029381.17	ENSMUST00000113055.9	6765	11	-602	-7	-602	3	multi-exon	FALSE	canonical	1	6	junction_2	46.2640249005639	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGAGATTTTTGCGGGT	4778	False	NA	20	True	AATGAA	-25	NA	92830691	93113180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92831691_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.10	chr5	+	5902	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	-26	525	-26	3	multi-exon	FALSE	canonical	1	6	junction_1	38.4967531098403	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCGGTTTGAGTTGTG	2154	False	NA	9	True	NA	NA	NA	92957210	93112652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.11	chr5	+	4907	7	NIC	ENSMUSG00000029381.17	novel	6401	10	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_5	49.2160768674447	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAGTCAAATTGAATA	2180	False	NA	3	True	AATGAA	-8	NA	92957236	93113163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93109949_93110223_93112214
ES.26355.12	chr5	+	3066	1	Intergenic	novelGene_21903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCACAG	1597	False	NA	NA	False	NA	NA	NA	92963764	92966830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92963800_92966800
ES.26355.13	chr5	+	1980	1	Intergenic	novelGene_21905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTGGAGCTGCCCAGC	6681	False	NA	NA	False	GATAAA	-45	NA	92968848	92970828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92968800_92970800
ES.26355.14	chr5	+	3573	1	Intergenic	novelGene_21908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATTTTCCTTGTAA	NA	False	NA	NA	False	NA	NA	NA	93041859	93045432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_93041900_93045400
ES.26355.15	chr5	+	5996	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-73	512	-73	6	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGTTTGAGTTGTGGGT	NA	False	NA	12	True	NA	NA	NA	93045778	93112655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.16	chr5	+	6735	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-72	-228	-72	218	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGCTATGCTGTG	NA	False	NA	4	True	AATAAA	-16	NA	93045779	93113395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.17	chr5	+	6527	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-72	-20	-72	10	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTGCGGGTTTTTCTT	NA	False	NA	27	True	AATGAA	-32	NA	93045779	93113187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.18	chr5	+	6369	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	-25	91	-25	-91	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACTTACTTGATTCTA	NA	False	NA	-84	True	AAAAAG	-19	NA	93045826	93113076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.2	chr5	+	6790	11	FSM	ENSMUSG00000029381.17	ENSMUST00000113055.9	6765	11	-119	94	-119	-88	multi-exon	FALSE	canonical	1	6	junction_2	46.2640249005639	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTACTTGATTCTATTT	5261	False	NA	-81	True	AAAAAG	-22	NA	92831174	93113079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92831691_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.20	chr5	+	6198	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGGAGATTTTTGC	NA	False	NA	16	True	AATGAA	-21	NA	93073227	93113176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.21	chr5	+	6304	10	NNC	ENSMUSG00000029381.17	novel	687	3	NA	NA	-11	4	intron_retention	FALSE	canonical	2	6	junction_1	48.7444837018306	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	NA	False	NA	21	True	AATGAA	-26	NA	93073254	93113181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93073342_93075412_93075541_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.22	chr5	+	5632	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	7	6	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGTTTGAGTTGTGGGT	NA	False	NA	12	True	NA	NA	NA	93073272	93112655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.23	chr5	+	4822	7	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	14	4	intron_retention	FALSE	canonical	0	0	junction_4	50.8581906437454	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	NA	False	NA	21	True	AATGAA	-26	NA	93073279	93113181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93103119_93103271_93109949_93110223_93112214
ES.26355.24	chr5	+	6361	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	21	221	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGCTATGCTGTGAGA	NA	False	NA	7	True	AATAAA	-19	NA	93073286	93113398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.25	chr5	+	6333	10	NNC	ENSMUSG00000029381.17	novel	687	3	NA	NA	27	4	intron_retention	FALSE	canonical	0	0	junction_1	49.9898755181585	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	NA	False	NA	21	True	AATGAA	-26	NA	93073292	93113181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93073342_93075345_93075541_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.26	chr5	+	6032	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	27	-92	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCACTTACTTGATTCT	NA	False	NA	-85	True	AAAAAG	-18	NA	93073292	93113075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.27	chr5	+	6111	9	NNC	ENSMUSG00000029381.17	novel	687	3	NA	NA	31	-4	intron_retention	FALSE	canonical	0	0	junction_4	50.8759213675782	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAGTCAAATTGAATA	NA	False	NA	3	True	AATGAA	-8	NA	93073296	93113163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096341_93098351_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.29	chr5	+	2397	4	ISM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	54030	-12	4138	2	3prime_fragment	FALSE	canonical	3	119	junction_3	11.2644968324772	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGAGATTTTTGCGGG	6358	False	NA	19	True	AATGAA	-24	NA	93099881	93113179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.3	chr5	+	620	1	Genic_Genomic	ENSMUSG00000029381.17	novel	NA	NA	NA	NA	-114	-125548	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAAT	5266	False	NA	NA	False	NA	NA	NA	92831179	92831799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_92831200_92831800
ES.26355.30	chr5	+	1582	1	Genic_Genomic	ENSMUSG00000029381.17	novel	NA	NA	NA	NA	1700	2	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGGAGATTTTTGCGGG	5610	False	NA	19	True	AATGAA	-24	NA	93111597	93113179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_93111600_93113200
ES.26355.4	chr5	+	7036	11	FSM	ENSMUSG00000029381.17	ENSMUST00000113055.9	6765	11	-48	-223	-48	219	multi-exon	FALSE	canonical	1	6	junction_2	46.2640249005639	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGTGCTATGCTGTGA	5332	False	NA	5	True	AATAAA	-17	NA	92831245	93113396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92831691_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.5	chr5	+	6537	12	NNC	ENSMUSG00000029381.17	novel	5630	12	NA	NA	146	3	intron_retention	TRUE	non_canonical	0	0	junction_1	53.0211247468543	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAATTGAATATGGAGAT	5716	False	NA	10	True	AATGAA	-15	NA	92831629	93113170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92831691_92899057_92899169_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.6	chr5	+	7185	11	NNC	ENSMUSG00000029381.17	novel	1027	2	NA	NA	-49085	2	intron_retention	FALSE	canonical	1	1	junction_1	47.7748888015451	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAATTGAATATGGAGA	4840	False	NA	9	True	AATGAA	-14	NA	92902993	93113169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_92903815_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26355.7	chr5	+	180	1	Intergenic	novelGene_21900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAAGGGCTGGAGA	3556	False	NA	NA	False	NA	NA	NA	92923200	92923380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_92923200_92923400
ES.26355.8	chr5	+	5284	1	Antisense	novelGene_ENSMUSG00000089268.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	1842	False	NA	NA	False	NA	NA	NA	92935169	92940453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_92935200_92940500
ES.26355.9	chr5	+	6460	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	-55	-4	-55	4	multi-exon	FALSE	canonical	1	6	junction_1	38.4967531098403	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGATTTTTGCGGGTT	2125	False	NA	21	True	AATGAA	-26	NA	92957181	93113181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ES.26356.1	chr5	-	2016	1	Intergenic	novelGene_21898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAATGAAATCAGGATACC	NA	False	NA	NA	False	NA	NA	NA	92882048	92880032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92880000_92882000
ES.26357.1	chr5	-	178	1	Intergenic	novelGene_21899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCCAGTGTGAATA	NA	False	NA	NA	False	NA	NA	NA	92905929	92905751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92905800_92905900
ES.26358.1	chr5	-	2938	1	Intergenic	novelGene_21901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCATTCTGCCCCTGG	564	False	NA	NA	False	TTTAAA	-24	NA	92964214	92961276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92961300_92964200
ES.26358.2	chr5	-	174	1	Intergenic	novelGene_21902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	954	False	NA	NA	False	NA	NA	NA	92963824	92963650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92963600_92963800
ES.26359.1	chr5	-	201	1	Intergenic	novelGene_21904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	92965860	92965659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92965700_92965900
ES.2636.1	chr10	+	177	1	Intergenic	novelGene_2003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	40195367	40195544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40195400_40195500
ES.26360.1	chr5	-	2068	1	Intergenic	novelGene_21906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGCACTGTGTAGATCA	NA	False	NA	NA	False	NA	NA	NA	92993577	92991509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_92991500_92993600
ES.26361.1	chr5	-	176	1	Intergenic	novelGene_21907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAATTGCTGAACAA	NA	False	NA	NA	False	NA	NA	NA	93031600	93031424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93031400_93031600
ES.26362.1	chr5	-	8678	1	Antisense	novelGene_ENSMUSG00000029381.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATATATACTTTGCTTC	NA	False	NA	NA	False	AATGAA	-11	NA	93113023	93104345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_93104300_93113000
ES.26363.1	chr5	-	204	1	Intergenic	novelGene_21909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAACAATCAGAATAAGT	NA	False	NA	NA	False	NA	NA	NA	93116833	93116629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93116600_93116800
ES.26364.1	chr5	-	152	1	Intergenic	novelGene_21910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	93138953	93138801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93138800_93139000
ES.26365.1	chr5	-	180	1	Intergenic	novelGene_21911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAAGAGTTCTATAGC	8416	False	NA	NA	False	NA	NA	NA	93142300	93142120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93142100_93142300
ES.26366.1	chr5	+	1517	1	Intergenic	novelGene_21912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAAGATT	1627	False	NA	NA	False	NA	NA	NA	93162829	93164346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_93162800_93164300
ES.26367.1	chr5	-	4011	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-111	0	-111	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTTCTCTTGTCTAT	NA	False	NA	-4	True	NA	NA	NA	93192992	93188981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93189000_93193000
ES.26367.2	chr5	-	3850	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	-76	126	-76	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATCAAGCTGTTATT	NA	False	NA	NA	False	ATTAAA	-30	NA	93192957	93189107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93189100_93193000
ES.26368.1	chr5	-	182	1	Intergenic	novelGene_21913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAACTTAAACA	NA	False	NA	NA	False	NA	NA	NA	93229129	93228947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93228900_93229100
ES.26369.1	chr5	+	5105	10	Fusion	ENSMUSG00000058013.12_ENSMUSG00000107374.2	novel	1119	3	NA	NA	1060	98	multi-exon	FALSE	canonical	0	0	junction_1	238.521578080216	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTGCTCTTTTAC	NA	False	NA	11	True	CATAAA	-16	NA	93239912	93322915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_93240053_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.10	chr5	+	5064	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-37	1	-37	-1	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTGTGCCCGTTTGT	NA	False	NA	11	True	AATATA	-16	NA	93241258	93322816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.11	chr5	+	4896	10	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	238.326107116559	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241266	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319358
ES.26369.12	chr5	+	344	2	NNC	ENSMUSG00000058013.12	novel	434	4	NA	NA	-27	4311	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	0	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGAAGTCAGGAGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	93241268	93246247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93246091
ES.26369.15	chr5	+	2199	2	NNC	ENSMUSG00000058013.12	novel	1066	7	NA	NA	-21	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACGTGAAGCCTATTGT	NA	False	NA	NA	False	TATAAA	-14	NA	93241274	93322657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241338_93320521
ES.26369.16	chr5	+	5098	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	300.458316576526	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTGTGCCCGTTTGT	NA	False	NA	11	True	AATATA	-16	NA	93241278	93322816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93245186_93245241_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.17	chr5	+	3180	9	FSM	ENSMUSG00000058013.12	ENSMUST00000201700.4	3478	9	-18	316	-17	-316	multi-exon	FALSE	canonical	3	652	junction_7	50.8046196226288	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATTATTGTCCCTCCG	NA	False	NA	NA	False	AATAAA	-13	NA	93241278	93317301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358
ES.26369.18	chr5	+	2636	1	FSM	ENSMUSG00000058013.12	ENSMUST00000201377.2	640	1	-18	-1978	-17	1978	mono-exon	FALSE	NA	NA	NA	NA	NA	742	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGTTGAGGAAGACA	NA	False	NA	NA	False	NA	NA	NA	93241278	93243914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241300_93243900
ES.26369.2	chr5	+	5190	11	Fusion	ENSMUSG00000058013.12_ENSMUSG00000107374.2	novel	1119	3	NA	NA	-1084	95	multi-exon	FALSE	canonical	0	0	junction_1	300.853718607565	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTGTCCTGCTCTTT	NA	False	NA	8	True	CATAAA	-13	NA	93240211	93322912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_93240274_93240662_93240829_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.20	chr5	+	1832	10	FSM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	-30	-10	-16	0	multi-exon	FALSE	canonical	2	4	junction_9	237.094813560491	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGCCTTTGAATTTGT	NA	False	NA	14	True	TTTAAA	-26	NA	93241279	93324306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ES.26369.21	chr5	+	6531	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-14	-1489	-14	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGCCTTTGAATTTGT	NA	False	NA	14	True	TTTAAA	-26	NA	93241281	93324306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.23	chr5	+	4311	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241288	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93319762_93320485
ES.26369.24	chr5	+	4972	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTGCCCGTTTG	NA	False	NA	10	True	AATATA	-15	NA	93241289	93322815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93320967_93321026
ES.26369.25	chr5	+	2452	10	NIC	ENSMUSG00000058013.12	novel	2428	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	236.171521683545	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGCCTTTGAATTTGT	NA	False	NA	14	True	TTTAAA	-26	NA	93241295	93324306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323262
ES.26369.26	chr5	+	3144	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTGCCCGTTTG	NA	False	NA	10	True	AATATA	-15	NA	93241295	93322815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93320432_93322313
ES.26369.27	chr5	+	4965	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	227.58602769063	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241295	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197_93320518_93320580
ES.26369.28	chr5	+	1691	10	NNC	ENSMUSG00000058013.12	novel	1792	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	308.096705998155	1037	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93241296	93324296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304777_93309027_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ES.26369.29	chr5	+	4916	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	1	111	0	-111	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCCGAGTAACTTGGT	NA	False	NA	-99	True	NA	NA	NA	93241296	93322706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.3	chr5	+	5172	11	Fusion	ENSMUSG00000058013.12_ENSMUSG00000107374.2	novel	1119	3	NA	NA	-871	-1	multi-exon	FALSE	canonical	0	0	junction_1	300.853718607565	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGTGTGCCCGTTTGT	NA	False	NA	11	True	AATATA	-16	NA	93240424	93322816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_93240568_93240665_93240829_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.30	chr5	+	5044	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	300.406790868649	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241297	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315446_93317675_93317795_93319197
ES.26369.31	chr5	+	8836	10	Fusion	ENSMUSG00000058013.12_ENSMUSG00000107019.2	novel	2428	11	NA	NA	1	3774	multi-exon	FALSE	canonical	3	7	junction_9	236.171521683545	1038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTAAGAGTGGTTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	93241297	93330692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323262
ES.26369.32	chr5	+	4971	10	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	237.905884493308	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241297	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241402_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.34	chr5	+	5748	9	NIC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	-155	intron_retention	FALSE	canonical	3	652	junction_6	45.0638435999416	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGAAGCCTATTGTTCCTA	NA	False	NA	NA	False	TATAAA	-19	NA	93241297	93322662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.35	chr5	+	4557	7	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	278.662679397312	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTGTCCTGCTCTTT	NA	False	NA	8	True	CATAAA	-13	NA	93241297	93322912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302841_93313168_93313241_93315358_93315547_93319197
ES.26369.36	chr5	+	3581	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	2	1445	1	-1445	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACGTGCTTTCGCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	93241297	93321372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.37	chr5	+	6042	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	2	-1016	1	-103	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGAGGTGGCTGCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	93241297	93323833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.38	chr5	+	5104	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.853718607565	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241297	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93285205_93285284_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.39	chr5	+	5013	10	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	236.819877377275	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTGCCCGTTTG	NA	False	NA	10	True	AATATA	-15	NA	93241299	93322815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296254_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.4	chr5	+	1620	5	Fusion	ENSMUSG00000058013.12_ENSMUSG00000107374.2	novel	1119	3	NA	NA	-735	2	multi-exon	FALSE	canonical	0	0	junction_1	327.379271640707	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATAGTACTTTGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	93240560	93305563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_93240829_93287307_93287423_93296245_93296442_93302728_93302916_93304709
ES.26369.40	chr5	+	5111	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	340.390129116577	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241300	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93246091_93246184_93287307_93287419_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.41	chr5	+	4763	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	4	-363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	300.604407818648	1032	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAACTTTGTCTATTTC	NA	False	NA	9	True	AATAAA	-24	NA	93241300	93322454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93315718_93315822_93319197
ES.26369.42	chr5	+	5125	11	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	300.604407818648	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241301	93322817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93315718_93315822_93319197
ES.26369.44	chr5	+	1509	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	97	3422	-2	1778	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGCGCGCGTGGCTGGAC	NA	False	NA	NA	False	NA	NA	NA	93241392	93319395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.45	chr5	+	7908	8	NNC	ENSMUSG00000058013.12	novel	3478	9	NA	NA	3	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	263.222572073482	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACGTGAAGCCTATTGT	NA	False	NA	NA	False	TATAAA	-14	NA	93296364	93322657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93318298_93318513
ES.26369.46	chr5	+	4557	7	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	61430	2	6364	-2	3prime_fragment	FALSE	canonical	3	652	junction_4	55.4135964061769	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTGCCCGTTTG	NA	False	NA	10	True	AATATA	-15	NA	93302725	93322815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.47	chr5	+	3985	7	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	8486	-371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	350.326236845347	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGCATTAGAACTTTG	NA	False	NA	1	True	AATAAA	-16	NA	93304847	93322446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93317669_93317795_93319197
ES.26369.48	chr5	+	8233	2	NNC	ENSMUSG00000058013.12	novel	3478	9	NA	NA	19485	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGGCCCATCCCTGC	NA	False	NA	2	True	TTTAAA	-14	NA	93315846	93324294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93318299_93318513
ES.26369.49	chr5	+	6506	2	NNC	ENSMUSG00000058013.12	novel	3478	9	NA	NA	21243	13	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGTGAAGCTGTGC	NA	False	NA	27	True	TTTAAA	-39	NA	93317604	93324319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93318305_93318513
ES.26369.5	chr5	+	5464	10	FSM	ENSMUSG00000058013.12_ENSMUSG00000107374.2	ENSMUST00000074733.11	5028	10	-336	-100	-336	100	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTGCTCTTTTACTT	NA	False	NA	13	True	CATAAA	-18	NA	93240959	93322917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.50	chr5	+	4584	2	Genic_Genomic	ENSMUSG00000058013.12	novel	5028	10	NA	NA	21756	96	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTGCTCTTTT	NA	False	NA	9	True	CATAAA	-14	NA	93318117	93322913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_93318302_93318513
ES.26369.51	chr5	+	1741	2	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	23822	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTGTGTGCCCGTTTG	NA	False	NA	10	True	AATATA	-15	NA	93320183	93322815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93320441_93321331
ES.26369.6	chr5	+	5056	10	NNC	ENSMUSG00000058013.12	novel	1119	3	NA	NA	-274	96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.521578080216	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTGCTCTTTT	NA	False	NA	9	True	CATAAA	-14	NA	93241021	93322913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241115_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.26369.7	chr5	+	5147	10	NNC	ENSMUSG00000058013.12	novel	5028	10	NA	NA	-125	95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	238.326107116559	1035	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTGTCCTGCTCTTT	NA	False	NA	8	True	CATAAA	-13	NA	93241170	93322912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315446_93319197
ES.26369.9	chr5	+	4752	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	-40	316	-40	-316	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTGTAGTTGTAGAAT	NA	False	NA	56	True	TTTAAA	-17	NA	93241255	93322501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ES.2637.1	chr10	+	151	1	Intergenic	novelGene_2004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	40219784	40219935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40219800_40219900
ES.26370.1	chr5	+	6053	2	Genic_Genomic	ENSMUSG00000083700.2	novel	382	1	NA	NA	-3443	2278	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCCTATTTTTACCA	NA	False	NA	NA	False	CATAAA	-27	NA	93340213	93346316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_93343769_93343818
ES.26371.1	chr5	-	3093	1	Intergenic	novelGene_21914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAGGGTTGACAAGATG	NA	False	NA	NA	False	CATAAA	-15	NA	93274836	93271743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93271700_93274800
ES.26372.1	chr5	-	193	1	Antisense	novelGene_ENSMUSG00000058013.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	93321332	93321139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_93321100_93321300
ES.26373.1	chr5	-	601	1	Antisense	novelGene_ENSMUSG00000058013.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAGAA	NA	False	NA	NA	False	CATAAA	-40	NA	93322138	93321537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_93321500_93322100
ES.26374.1	chr5	-	1474	1	Antisense	novelGene_ENSMUSG00000058013.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAAAGCACTTC	NA	False	NA	NA	False	AAAAAG	-33	NA	93324686	93323212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_93323200_93324700
ES.26375.1	chr5	-	5768	1	FSM	ENSMUSG00000106870.2	ENSMUST00000201581.2	1903	1	-1502	-2363	-1502	2363	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGATGGAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	93335119	93329351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93329400_93335100
ES.26375.10	chr5	-	2878	6	NIC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	114	-6	intron_retention	FALSE	canonical	3	340	junction_5	45.3845788787337	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	False	NA	-8	True	AATAAA	-12	NA	93354173	93329797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_93331280_93335446_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.11	chr5	-	3020	9	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	199.475405752188	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	False	NA	-8	True	AATAAA	-12	NA	93354308	93329797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353300_93353473_93353772
ES.26375.13	chr5	-	7151	5	NIC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	7	-7	intron_retention	FALSE	canonical	3	340	junction_4	50.7315237303198	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTTGGTTTGTGTAGGA	NA	False	NA	-9	True	AATAAA	-11	NA	93354280	93329798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.14	chr5	-	3016	8	NIC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	177.385317939248	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGTTGGTTTGTGTAGG	NA	False	NA	-10	True	AATAAA	-10	NA	93354308	93329799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353300_93353567_93353772
ES.26375.15	chr5	-	2842	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	197.419061172638	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACGTTGGTTTGTGTAG	NA	False	NA	-11	True	AATAAA	-9	NA	93354301	93329800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331114_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353300_93353567_93353772
ES.26375.16	chr5	-	2586	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-22	-269	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATCTGTTCTTGCTCA	NA	False	NA	NA	False	AATATA	-16	NA	93354309	93330060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
ES.26375.17	chr5	-	2185	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	43	576	-24	-576	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTTTGTGTGGCAG	NA	False	NA	NA	False	TTTAAA	-15	NA	93354311	93330367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.18	chr5	-	5005	6	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	62	1904	-5	-544	5prime_fragment	FALSE	canonical	3	340	junction_5	52.852246877498	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTAATGTTTTCCGTTGC	NA	False	NA	NA	False	AATAAA	-38	NA	93354292	93331695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.19	chr5	-	3900	1	NIC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-1660	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGTAACTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	93339184	93335284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_93335300_93339200
ES.26375.2	chr5	-	2799	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	6	-1	6	1	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTAGGAGTTTTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	93354348	93329790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.20	chr5	-	1433	6	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	45	5493	-22	27	5prime_fragment	FALSE	canonical	3	340	junction_5	52.852246877498	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTGTAACTGGCATCT	NA	False	NA	NA	False	NA	NA	NA	93354309	93335284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26375.5	chr5	-	3033	7	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-4	intron_retention	FALSE	canonical	0	0	junction_6	159.809695853815	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTTTGTGTAGGAGTT	NA	False	NA	-6	True	AATAAA	-14	NA	93354308	93329795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353493
ES.26375.7	chr5	-	3270	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-22	-6	intron_retention	FALSE	canonical	0	0	junction_6	191.216940586725	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	False	NA	-8	True	AATAAA	-12	NA	93354309	93329797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93352251_93352297_93353300
ES.26375.8	chr5	-	2848	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	False	NA	-8	True	AATAAA	-12	NA	93354308	93329797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
ES.26375.9	chr5	-	2586	7	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	153.567574702474	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	False	NA	-8	True	AATAAA	-12	NA	93354308	93329797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_93331114_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ES.26376.1	chr5	+	179	1	Intergenic	novelGene_21915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93369204	93369383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_93369200_93369400
ES.26377.1	chr5	+	2865	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	-62	7	-62	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	93415053	93424083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.10	chr5	+	2508	6	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	1	-189	intron_retention	FALSE	canonical	3	45	junction_3	9.92773891679269	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93415460	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93419321_93421196_93421403_93422732
ES.26377.11	chr5	+	2417	8	NNC	ENSMUSG00000029385.15	novel	2570	7	NA	NA	-90	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7846096908265	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATATTAATGA	NA	False	NA	NA	False	NA	NA	NA	93416082	93424054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_93416267_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.12	chr5	+	5687	3	ISM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	139	189	139	-189	intron_retention	FALSE	canonical	3	45	junction_2	13.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93416311	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_93416619_93417123_93417262_93418652
ES.26377.14	chr5	+	2218	6	NIC	ENSMUSG00000029385.15	novel	2570	7	NA	NA	-183	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.0807969488822	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACATGTATTCCTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	93416383	93424080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93416619_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.15	chr5	+	4134	3	NIC	ENSMUSG00000029385.15	novel	4537	5	NA	NA	-170	-189	intron_retention	FALSE	canonical	0	0	junction_1	25.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93416396	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93416619_93418652_93421403_93422732
ES.26377.16	chr5	+	2132	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	249	189	-145	-189	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93416421	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.2	chr5	+	3642	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	-1071	-1	-14	0	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTCCTATTTCAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	93415101	93424084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.3	chr5	+	4375	7	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	45	junction_3	8.85061203156784	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACATGTATTCCTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	93415416	93424080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93421403_93422732
ES.26377.4	chr5	+	2308	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	306	196	-26	-189	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93415421	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.5	chr5	+	4607	5	FSM	ENSMUSG00000029385.15	ENSMUST00000130183.8	4537	5	-74	4	-24	-3	multi-exon	FALSE	canonical	3	45	junction_3	10.1087833095779	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACATGTATTCCTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	93415423	93424080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93421403_93422732
ES.26377.6	chr5	+	5408	4	NIC	ENSMUSG00000029385.15	novel	4537	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	45	junction_2	11.5758369027902	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATTCCTATTTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	93415448	93424082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93416619_93417123_93417262_93418652_93421403_93422732
ES.26377.7	chr5	+	2436	7	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	2	-189	intron_retention	FALSE	canonical	3	45	junction_3	9.41039614232874	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTGTGATAATTG	NA	False	NA	NA	False	CATAAA	-16	NA	93415449	93423894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93419139_93419221_93419321_93421196_93421403_93422732
ES.26377.8	chr5	+	2550	7	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	45	junction_3	9.19691977421426	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATTCCTATTTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	93415450	93424082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419321_93421196_93421403_93422732
ES.26377.9	chr5	+	4312	6	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	3	-188	intron_retention	FALSE	canonical	3	45	junction_3	9.23904756996088	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGTGTGATAATTGG	NA	False	NA	NA	False	CATAAA	-17	NA	93415450	93423895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93419139_93419221_93421403_93422732
ES.26378.1	chr5	-	175	1	Intergenic	novelGene_21916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	93495859	93495684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_93495700_93495900
ES.26379.1	chr5	-	3497	2	Fusion	ENSMUSG00000053208.11_ENSMUSG00000096044.5	novel	2042	4	NA	NA	-5	842	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTGGGGTAAT	NA	False	NA	NA	False	NA	NA	NA	93641565	93537618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_93540979_93641428
ES.26379.2	chr5	-	2533	4	FSM	ENSMUSG00000096044.5	ENSMUST00000201432.4	2042	4	-27	-464	-27	464	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAAAGAAACAA	NA	False	NA	NA	False	CATAAA	-44	NA	93641587	93629223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_93630693_93631674_93632266_93632933_93633248_93641428
ES.2638.10	chr10	+	4109	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	27	1671	-2	2	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATACACACTTCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	40225330	40358143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.11	chr10	+	4675	7	NNC	ENSMUSG00000038481.14	novel	3973	12	NA	NA	0	-21897	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.3998341614945	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGCTTAAAGTCGTT	NA	False	NA	NA	False	NA	NA	NA	40225332	40334967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40330866_40331180_40331376
ES.2638.12	chr10	+	5702	12	FSM	ENSMUSG00000038481.14	ENSMUST00000215000.2	5681	12	-21	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9.04899428227586	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225332	40359814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.13	chr10	+	5568	11	NIC	ENSMUSG00000038481.14	novel	3973	12	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.0290525431698	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCTGCGTGGGTTATT	NA	False	NA	5	True	AATAAA	-13	NA	40225349	40359811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.14	chr10	+	5423	10	NIC	ENSMUSG00000038481.14	novel	5681	12	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.5288152143624	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225359	40359814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_40225718_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.15	chr10	+	3898	12	FSM	ENSMUSG00000038481.14	ENSMUST00000215000.2	5681	12	64	1719	64	-2	multi-exon	FALSE	canonical	2	7	junction_1	9.04899428227586	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTGTATGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	40225417	40358095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.17	chr10	+	177	1	Intergenic	novelGene_2005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGTACCTT	NA	False	NA	NA	False	NA	NA	NA	40234816	40234993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40234800_40235000
ES.2638.18	chr10	+	6580	1	Intergenic	novelGene_2006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGGAGCTGCTGAGCT	NA	False	NA	NA	False	ACTAAA	-30	NA	40241622	40248202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40241600_40248200
ES.2638.19	chr10	+	4474	3	Intergenic	novelGene_2009	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATTACCTTGATTGGC	5158	False	NA	NA	False	NA	NA	NA	40263624	40268336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40264687_40264733_40267045_40267235
ES.2638.2	chr10	+	5814	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	-7	0	-7	0	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225296	40359814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.20	chr10	+	7041	10	ISM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	44798	-1716	44798	-1	intron_retention	FALSE	canonical	1	1	junction_3	11.2095638179036	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCGTGGGTTATTTT	NA	False	NA	7	True	AATAAA	-15	NA	40270319	40359813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697
ES.2638.21	chr10	+	5185	1	Intergenic	novelGene_2012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTTATTTTGGTGAC	NA	False	NA	NA	False	NA	NA	NA	40295389	40300574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40295400_40300600
ES.2638.3	chr10	+	8239	11	ISM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	8	0	8	0	intron_retention	FALSE	canonical	3	24	junction_4	5.90338885725818	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225311	40359814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884
ES.2638.4	chr10	+	5734	12	FSM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	-203	-1717	-14	0	multi-exon	FALSE	canonical	1	1	junction_4	10.2900095976953	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225318	40359814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.5	chr10	+	5779	12	ISM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	16	1718	-13	-1	intron_retention	FALSE	canonical	3	24	junction_4	5.93072961101821	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGTATGTATGTGTA	NA	False	NA	NA	False	NA	NA	NA	40225319	40358096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697
ES.2638.6	chr10	+	5856	14	NNC	ENSMUSG00000038481.14	novel	5807	13	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.121182983648	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCGTGGGTTATTTT	NA	False	NA	7	True	AATAAA	-15	NA	40225319	40359813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345266_40345333_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.7	chr10	+	4013	12	FSM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	-201	2	-12	-2	multi-exon	FALSE	canonical	1	1	junction_4	10.2900095976953	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTGTATGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	40225320	40358095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ES.2638.8	chr10	+	5992	5	NNC	ENSMUSG00000038481.14	novel	3973	12	NA	NA	-12	-21314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	12.8135670287395	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAGAAAGCTGTCTTA	NA	False	NA	NA	False	AATATA	-21	NA	40225320	40335550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40225718_40310299_40310411_40312067_40312209_40330010_40331180_40331376
ES.2638.9	chr10	+	3524	14	NNC	ENSMUSG00000038481.14	novel	5807	13	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	9.53101446260525	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGTATGTATGTGTA	NA	False	NA	NA	False	NA	NA	NA	40225328	40358096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670_40355793_40356332
ES.26380.1	chr5	+	131	1	Intergenic	novelGene_21917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	95014129	95014260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_95014100_95014300
ES.26381.1	chr5	-	1865	4	FSM	ENSMUSG00000096066.5	ENSMUST00000201031.4	1848	4	0	-17	0	17	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGTCTGAGTAGAATAATA	NA	False	NA	NA	False	AATAAA	-35	NA	95420627	95416334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_95417221_95418116_95418708_95419160_95419475_95420553
ES.26382.1	chr5	+	173	1	Intergenic	novelGene_21918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	4505	False	NA	NA	False	NA	NA	NA	95979339	95979512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_95979300_95979500
ES.26383.1	chr5	+	1276	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-72	-202	-72	202	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACCGTCAATAAGACAAA	NA	False	NA	NA	False	AATAAA	-38	NA	96009500	96010776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96009500_96010800
ES.26383.2	chr5	+	974	2	Genic_Genomic	ENSMUSG00000096617.4	novel	1002	1	NA	NA	-64	202	multi-exon	FALSE	non_canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACCGTCAATAAGACAAA	NA	False	NA	NA	False	AATAAA	-38	NA	96009508	96010776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_96009632_96009925
ES.26383.3	chr5	+	745	2	Genic_Genomic	ENSMUSG00000096617.4	novel	1002	1	NA	NA	394	176	multi-exon	FALSE	non_canonical	0	0	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	96009966	96010750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_96010053_96010091
ES.26384.1	chr5	+	757	1	FSM	ENSMUSG00000107092.2	ENSMUST00000200970.2	1384	1	963	-336	963	336	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACACACAC	NA	False	NA	NA	False	AATAAA	-20	NA	96123061	96123818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96123100_96123800
ES.26385.1	chr5	-	4172	1	Intergenic	novelGene_21919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTAGCTTTCCTCCTCT	2531	False	NA	NA	False	ATTAAA	-21	NA	96207484	96203312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_96203300_96207500
ES.26386.1	chr5	+	1754	1	Intergenic	novelGene_21920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAAGGCTAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	96231514	96233268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_96231500_96233300
ES.26387.1	chr5	+	1518	2	Antisense	novelGene_ENSMUSG00000034724.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96264431	96266053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_96265369_96265472
ES.26388.1	chr5	-	9162	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-592	-6	-592	6	multi-exon	TRUE	canonical	3	19	junction_9	8.72253659368072	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTGATTATTTG	NA	False	NA	5	True	AATAAA	-26	NA	96310441	96218185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.10	chr5	-	5044	11	ISM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	27711	-2026	-5016	1865	3prime_fragment	FALSE	canonical	3	19	junction_9	8.08455317256309	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGAATATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	96281903	96221569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869
ES.26388.11	chr5	-	4426	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-115	-1141	1	980	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTATCCTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	96309729	96222454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ES.26388.12	chr5	-	4333	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-130	886	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	12.6836916178947	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAAGTTTATTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	96309979	96222548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279101_96281869_96281992_96309795
ES.26388.13	chr5	-	4314	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	25	886	combination_of_known_junctions	TRUE	canonical	2	2	junction_11	11.8265704494178	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAAGTTTATTTTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	96309381	96222548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309220
ES.26388.16	chr5	-	4384	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-610	4790	-610	453	multi-exon	FALSE	canonical	3	19	junction_9	8.72253659368072	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCTCAGTGTTCAGGT	NA	False	NA	NA	False	AATAAA	-27	NA	96310459	96222981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.17	chr5	-	3924	12	NNC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-2	451	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.2132518772313	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTCCTCAGTGTTCAG	NA	False	NA	NA	False	AATAAA	-25	NA	96309408	96222983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96228013_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309220
ES.26388.18	chr5	-	4195	12	NNC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-544	445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.066547856352	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAGATTTTCCTCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	96310393	96222989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96227995_96230728_96230840_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254167_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.19	chr5	-	4193	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	25	441	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	11.8265704494178	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGATGACAGATTTTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	96309705	96222993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309220
ES.26388.21	chr5	-	3743	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-14	440	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	11.8265704494178	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATGACAGATTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	96309744	96222994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309708
ES.26388.22	chr5	-	6840	11	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-539	440	intron_retention	FALSE	canonical	3	19	junction_8	9.14330356052997	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATGACAGATTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	96310388	96222994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.23	chr5	-	4392	12	NNC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-616	440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.6836916178947	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATGACAGATTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	96310465	96222994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279120_96281869_96281992_96309795
ES.26388.24	chr5	-	3838	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-67	-601	49	440	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATGACAGATTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	96309681	96222994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ES.26388.25	chr5	-	4554	7	ISM	ENSMUSG00000034724.19	ENSMUST00000036646.14	3314	12	62107	-450	-12715	437	3prime_fragment	FALSE	canonical	3	24	junction_5	8.06225774829855	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTGATGACAGATTT	NA	False	NA	NA	False	AATAAA	-11	NA	96247507	96222997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103
ES.26388.3	chr5	-	6143	12	NIC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	47	-2461	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	11.8265704494178	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGTTTACCGACTT	NA	False	NA	NA	False	CATAAA	-29	NA	96309802	96220652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309708
ES.26388.30	chr5	-	4033	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-608	5139	-608	104	multi-exon	FALSE	canonical	3	19	junction_9	8.72253659368072	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACCTCTTAGGCTG	NA	False	NA	NA	False	AATATA	-21	NA	96310457	96223330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.31	chr5	-	3407	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-76	-161	40	0	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAATAACCTATA	NA	False	NA	NA	False	AATAAA	-30	NA	96309690	96223434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ES.26388.32	chr5	-	3821	12	NNC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-533	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.2683493875181	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTGATGAAATTTAAAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	96310382	96223447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278937_96279105_96281869_96281992_96309795
ES.26388.4	chr5	-	5439	7	NNC	ENSMUSG00000034724.19	novel	3314	12	NA	NA	-5	-2472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.1864140562386	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATGTGTTAAAAATTTG	NA	False	NA	NA	False	CATAAA	-18	NA	96309627	96220663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239558_96281915_96281992_96309550
ES.26388.5	chr5	-	6163	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-62	-2931	54	-2473	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGTGTTAAAAATTT	NA	False	NA	NA	False	CATAAA	-17	NA	96309676	96220664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ES.26388.6	chr5	-	6209	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-599	2954	-599	2289	multi-exon	FALSE	canonical	3	19	junction_9	8.72253659368072	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAAATTCTGTCTCCT	NA	False	NA	-6	True	ATTAAA	-26	NA	96310448	96221145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ES.26388.8	chr5	-	6271	13	NNC	ENSMUSG00000034724.19	novel	8564	12	NA	NA	-559	2277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.4270194041905	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATTGTGCTGTTTAAAA	NA	False	NA	-18	True	ATTAAA	-14	NA	96310408	96221157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281243_96281358_96281869_96281992_96309795
ES.26388.9	chr5	-	5684	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	-79	-2435	37	2274	multi-exon	FALSE	canonical	3	6	junction_11	10.9800721068249	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAATATTGTGCTGTTTA	NA	False	NA	-21	True	ATTAAA	-11	NA	96309693	96221160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ES.26389.1	chr5	-	169	1	Intergenic	novelGene_21921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTTTGGTTATA	NA	False	NA	NA	False	NA	NA	NA	96317451	96317282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_96317300_96317500
ES.2639.1	chr10	-	1640	2	Antisense	novelGene_ENSMUSG00000111788.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAATAAATAAGTCTGT	6930	False	NA	NA	False	NA	NA	NA	40251192	40088206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_40088255_40249600
ES.2639.10	chr10	-	1614	10	FSM	ENSMUSG00000038510.13	ENSMUST00000045114.13	1853	10	-17	256	8	-75	multi-exon	FALSE	canonical	2	7	junction_9	383.349983535337	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6574	False	NA	-7	True	TTTAAA	-3	NA	40123015	40099497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122538
ES.2639.11	chr10	-	1178	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	-4	-75	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6562	False	NA	-7	True	TTTAAA	-3	NA	40123027	40099497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
ES.2639.12	chr10	-	1929	15	Fusion	ENSMUSG00000019837.9_ENSMUSG00000038510.13	novel	1853	10	NA	NA	-6	-80	multi-exon	FALSE	canonical	0	0	junction_9	404.53218130859	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGAAACTTGTGT	8575	False	NA	-12	True	NA	NA	NA	40133678	40099502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40125441_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
ES.2639.13	chr10	-	1082	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-2	216	-2	40	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGGGTGTAACAAAATT	6555	False	NA	0	True	GATAAA	-18	NA	40123034	40099638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ES.2639.14	chr10	-	1104	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	-82	20	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTGTTGCTTATTTG	6475	False	NA	16	True	ACTAAA	-38	NA	40123114	40099658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
ES.2639.15	chr10	-	1361	10	FSM	ENSMUSG00000038510.13	ENSMUST00000045114.13	1853	10	4	488	4	-51	multi-exon	FALSE	canonical	2	7	junction_9	383.349983535337	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACGAGCACTTTCTTAT	6595	False	NA	-55	True	AAGAAA	-14	NA	40122994	40099729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122538
ES.2639.16	chr10	-	254	1	Intergenic	novelGene_1998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTCCTGGCTTAGCCC	NA	False	NA	NA	False	NA	NA	NA	40104652	40104398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40104400_40104700
ES.2639.18	chr10	-	4043	6	FSM	ENSMUSG00000038510.13_ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-24	-1493	-19	1493	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTAAATGACTAACTTGG	8562	False	NA	NA	False	AATAAA	-21	NA	40133691	40122205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ES.2639.19	chr10	-	2540	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-11	-3	-6	3	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTTGATGGTTGCATCT	8575	False	NA	-28	True	AATAAA	-18	NA	40133678	40123695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ES.2639.2	chr10	-	1504	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-4	-204	-4	23	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTCATGCCTGGGTGT	6553	False	NA	NA	False	TTTAAA	-21	NA	40123036	40099218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ES.2639.22	chr10	-	1563	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	-4	-672	-4	672	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTGTTTTGTTTAA	8577	False	NA	NA	False	NA	NA	NA	40133676	40124673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
ES.2639.23	chr10	-	1470	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-444	1500	-7	147	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGTGCAGCGAACACT	8142	False	NA	-13	True	NA	NA	NA	40134111	40125198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ES.2639.27	chr10	-	1172	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-471	1825	-34	-4	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGTGGTCTTGTATGC	8115	False	NA	-20	True	AAAACA	-17	NA	40134138	40125523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ES.2639.28	chr10	-	704	6	FSM	ENSMUSG00000019837.9	ENSMUST00000213628.2	526	6	-58	-120	10	-4	multi-exon	FALSE	canonical	2	6	junction_5	263.125369358411	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGTGGTCTTGTATGC	8596	False	NA	-20	True	AAAACA	-17	NA	40133657	40125523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133561
ES.2639.29	chr10	-	3236	9	NNC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	26121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.977986116179	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGTTAATACATGTAT	NA	False	NA	NA	False	NA	NA	NA	40178181	40137332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40137362_40163449_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.3	chr10	-	1443	9	NNC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	2	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	403.758726685876	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACCTTCATGCCTGGGT	6593	False	NA	NA	False	TTTAAA	-19	NA	40122996	40099220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112218_40119847_40119890_40120580_40120714_40122948
ES.2639.30	chr10	-	176	1	Intergenic	novelGene_2000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGAG	NA	False	NA	NA	False	NA	NA	NA	40145238	40145062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40145100_40145200
ES.2639.33	chr10	-	4324	7	NIC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	-6	intron_retention	FALSE	canonical	3	315	junction_3	52.4322313933795	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGAAAGTTTTCTGTT	NA	False	NA	-11	True	AATAAA	-23	NA	40178181	40163459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.37	chr10	-	3046	9	NNC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	147.034009671232	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGAGAAAGTTTTCTG	NA	False	NA	-13	True	AATAAA	-21	NA	40178181	40163461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744_40177950_40178098
ES.2639.39	chr10	-	3202	8	NNC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.472205264731	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGAGAAAGTTTTCT	NA	False	NA	-14	True	AATAAA	-20	NA	40178181	40163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40165466_40166113_40166270_40166373_40166612_40167981_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.4	chr10	-	1396	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-3	-97	-3	-84	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAGTGCCTTTATCCA	6554	False	NA	1	True	NA	NA	NA	40123035	40099325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ES.2639.40	chr10	-	4573	7	NIC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	0	-9	intron_retention	FALSE	canonical	3	426	junction_3	18.9619502044372	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGAGAAAGTTTTCT	NA	False	NA	-14	True	AATAAA	-20	NA	40178182	40163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40165466_40166113_40166270_40166373_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.41	chr10	-	5486	6	NIC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	-9	intron_retention	FALSE	canonical	3	426	junction_3	19.3659494990563	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGAGAAAGTTTTCT	NA	False	NA	-14	True	AATAAA	-20	NA	40178181	40163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40165466_40166113_40166270_40166373_40168033_40169159_40170304_40170712_40170800_40177744
ES.2639.43	chr10	-	2757	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	1	446	1	-446	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGAGTCTACTTGGTT	NA	False	NA	NA	False	NA	NA	NA	40178181	40163899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.44	chr10	-	2221	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	1	982	1	884	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATAGGCTGTGCAGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	40178181	40164435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.45	chr10	-	1964	8	FSM	ENSMUSG00000075232.7	ENSMUST00000238969.2	3206	8	-58	1300	-58	566	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGACTCCAGTTGCTTG	NA	False	NA	18	True	ATTAAA	-32	NA	40178242	40164753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ES.2639.46	chr10	-	2801	7	NIC	ENSMUSG00000075232.7	novel	3204	8	NA	NA	1	550	intron_retention	FALSE	canonical	3	315	junction_3	52.4139506450546	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCTTTGTAAGAAAA	NA	False	NA	2	True	ATTAAA	-16	NA	40178181	40164769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40170304_40170712_40170800_40177744
ES.2639.47	chr10	-	3144	1	Genic_Genomic	ENSMUSG00000075232.7	novel	NA	NA	NA	NA	-1	-5037	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTGCTTTCCACATC	NA	False	NA	NA	False	AAAAAG	-4	NA	40178185	40175041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_40175000_40178200
ES.2639.48	chr10	-	192	1	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	1	14536	1	-7985	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	40178181	40177989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_40178000_40178200
ES.2639.49	chr10	-	5938	1	Intergenic	novelGene_2007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAACAACAATAAGAAAACT	6930	False	NA	NA	False	AAGAAA	-3	NA	40251192	40245254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40245300_40251200
ES.2639.50	chr10	-	168	1	Intergenic	novelGene_2008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATTGTTAGCTGC	8433	False	NA	NA	False	NA	NA	NA	40249689	40249521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40249500_40249700
ES.2639.6	chr10	-	1269	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	-18	45	-18	-45	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTCTCACTGTTTTTA	6539	False	NA	-3	True	TTTAAA	-33	NA	40123050	40099467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ES.2639.7	chr10	-	6648	14	Fusion	ENSMUSG00000019837.9_ENSMUSG00000038510.13	novel	1853	10	NA	NA	8	-67	intron_retention	FALSE	canonical	3	403	junction_13	302.295321727713	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTTGGATCATACTC	8594	False	NA	1	True	TTTAAA	-11	NA	40133659	40099489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ES.2639.8	chr10	-	5255	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	2	-73	intron_retention	FALSE	canonical	3	1125	junction_3	60.3384982826056	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACTTGTGTTTGGATC	6593	False	NA	-5	True	TTTAAA	-5	NA	40122996	40099495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40119890_40120580_40120714_40122948
ES.2639.9	chr10	-	1875	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	3	-75	intron_retention	FALSE	canonical	3	1057	junction_7	74.9065042235986	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6594	False	NA	-7	True	TTTAAA	-3	NA	40122995	40099497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40120714_40122948
ES.26390.1	chr5	+	3289	2	Genic_Genomic	ENSMUSG00000090468.4	novel	411	1	NA	NA	-1573	2552	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGACTCCAGTTTACTCC	NA	False	NA	NA	False	NA	NA	NA	96320225	96324761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_96322654_96323900
ES.26391.1	chr5	+	1811	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	-591	2211	31	-2211	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTCAGTTTCTAAAA	NA	False	NA	104	True	AGTAAA	-39	NA	96357382	96412357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.11	chr5	+	3516	10	NNC	ENSMUSG00000029486.14	novel	3556	10	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	297.593682728649	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTATTCTATTATATG	NA	False	NA	NA	False	ATTAAA	-36	NA	96358009	96414573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96358053_96361645_96361770_96362203_96362320_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.12	chr5	+	3487	9	NNC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	235.988049220718	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTATTCTATTATATG	NA	False	NA	NA	False	ATTAAA	-36	NA	96358012	96414573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96358143_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.13	chr5	+	1159	9	NNC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	38	-2295	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	235.988049220718	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGCTCCTCATGTTT	NA	False	NA	20	True	TATAAA	-14	NA	96358040	96412273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96358143_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.14	chr5	+	3591	10	NNC	ENSMUSG00000029486.14	novel	3556	10	NA	NA	110	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	301.493115618636	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAATTATCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	96358112	96414559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96358309_96359617_96359670_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.15	chr5	+	3025	1	Intergenic	novelGene_21922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAGCATAGCAACTTT	NA	False	NA	NA	False	NA	NA	NA	96393496	96396521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_96393500_96396500
ES.26391.16	chr5	+	8673	1	NIC	ENSMUSG00000029486.14	novel	3556	10	NA	NA	45599	-2294	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCCTCATGTTTT	NA	False	NA	21	True	TATAAA	-15	NA	96403601	96412274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_96403600_96412300
ES.26391.17	chr5	+	4629	2	ISM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	47614	2295	47585	-2295	3prime_fragment	FALSE	canonical	3	671	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGCTCCTCATGTTT	NA	False	NA	20	True	TATAAA	-14	NA	96405587	96412273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_96410003_96412059
ES.26391.2	chr5	+	3433	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	11	-13	11	-5	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTATATGTGTATGAG	NA	False	NA	NA	False	ATTAAA	-44	NA	96357984	96414581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.3	chr5	+	1001	8	NIC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	12	-2294	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	252.613684248078	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCCTCATGTTTT	NA	False	NA	21	True	TATAAA	-15	NA	96357985	96412274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_96358053_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.4	chr5	+	1111	9	NNC	ENSMUSG00000029486.14	novel	3431	9	NA	NA	-5	-2295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.526784228996	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGCTCCTCATGTTT	NA	False	NA	20	True	TATAAA	-14	NA	96357997	96412273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96358047_96361640_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.6	chr5	+	3205	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	28	198	-1	-198	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCATCAGTTTATTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	96358001	96414370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.7	chr5	+	2624	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	28	779	-1	-779	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTGGGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	96358001	96413789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ES.26391.9	chr5	+	1547	7	FSM	ENSMUSG00000029486.14	ENSMUST00000121477.2	1550	7	0	3	0	-3	multi-exon	FALSE	canonical	3	666	junction_1	19.5078331845327	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTGGTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	96358002	96387540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697
ES.26392.1	chr5	-	2162	1	Antisense	novelGene_ENSMUSG00000029486.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96377333	96375171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_96375200_96377300
ES.26392.2	chr5	-	2121	2	Antisense	novelGene_ENSMUSG00000029486.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96377333	96375171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_96375667_96375707
ES.26393.1	chr5	-	177	1	Intergenic	novelGene_21923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTGAAAAAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	96394988	96394811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_96394800_96395000
ES.26394.1	chr5	-	3107	2	Antisense	novelGene_ENSMUSG00000029486.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTGGGACCAAACTTAAG	NA	False	NA	NA	False	NA	NA	NA	96401125	96397918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_96399955_96400054
ES.26394.2	chr5	-	2503	2	Antisense	novelGene_ENSMUSG00000029486.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	96400539	96397935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_96399961_96400061
ES.26395.1	chr5	-	169	1	Intergenic	novelGene_21924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGC	NA	False	NA	NA	False	NA	NA	NA	96688091	96687922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_96687900_96688100
ES.26396.1	chr5	+	3777	19	NNC	ENSMUSG00000034687.9	novel	15848	74	NA	NA	110668	-2867	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	0.666666666666667	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGGGAAAAC	NA	False	NA	NA	False	TATAAA	-40	NA	96888645	96929720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_96888893_96890909_96891071_96892499_96892648_96897318_96897438_96900803_96900892_96903233_96903435_96905907_96906096_96907314_96907591_96910346_96910580_96912704_96912866_96916135_96916351_96917364_96917516_96918499_96918608_96919430_96919591_96920405_96920523_96924479_96924647_96925883_96926090_96927880_96928028_96929036
ES.26397.1	chr5	+	1389	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	95	111	-24	-5	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGCTGCCTTTCCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	96941338	96993714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ES.26397.2	chr5	+	1680	1	Intergenic	novelGene_21926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	96987846	96989526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_96987800_96989500
ES.26398.1	chr5	-	225	1	Intergenic	novelGene_21925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTAAAAACAGTCGGTCA	NA	False	NA	NA	False	NA	NA	NA	96959672	96959447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_96959400_96959700
ES.26399.1	chr5	+	180	1	Intergenic	novelGene_21927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTACAAAGGAT	801	False	NA	NA	False	NA	NA	NA	96998522	96998702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_96998500_96998700
ES.264.1	chr1	+	223	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAACAAAGCATAG	NA	False	NA	NA	False	AAAAAG	-18	NA	36090762	36090985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36090800_36091000
ES.2640.1	chr10	-	2736	1	Intergenic	novelGene_2010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAACTATAGGACCC	NA	False	NA	NA	False	NA	NA	NA	40283266	40280530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40280500_40283300
ES.26400.1	chr5	+	3407	13	NIC	ENSMUSG00000034663.14	novel	3244	14	NA	NA	-263	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	7.3762946133016	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTTGTATGGTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	97145284	97217507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97212687_97212873_97216257
ES.26400.10	chr5	+	7284	16	NNC	ENSMUSG00000034663.14	novel	7387	16	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.38647412504776	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGTCTTTGGAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	97145560	97239724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186367_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26400.11	chr5	+	3802	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	13	3572	13	-3572	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGTAGTAAGTGGATGC	NA	False	NA	NA	False	AATAAA	-19	NA	97145560	97236154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26400.12	chr5	+	1845	11	ISM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	14	7843	14	-7843	5prime_fragment	FALSE	canonical	2	13	junction_5	3.26955654485436	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAGAATGTTTTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	97145561	97209665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264
ES.26400.13	chr5	+	5341	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	16	-2113	16	2113	multi-exon	FALSE	canonical	0	0	junction_13	5.94053371578702	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTCTGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	97145563	97219621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
ES.26400.2	chr5	+	5511	14	NNC	ENSMUSG00000034663.14	novel	3244	14	NA	NA	-256	2012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	5.94053371578702	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTCTCAGTGTAAATGA	NA	False	NA	NA	False	AATAAA	-12	NA	97145291	97219520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212872_97216257
ES.26400.3	chr5	+	4537	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	-227	3077	-227	-3077	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAATACAAAGAGAAATA	NA	False	NA	NA	False	NA	NA	NA	97145320	97236649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26400.4	chr5	+	3267	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	-22	-1	-22	1	multi-exon	FALSE	canonical	0	0	junction_13	5.94053371578702	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTATGGTATTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	97145525	97217509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
ES.26400.6	chr5	+	7435	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	7	-55	7	55	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTTCAGTTCTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	97145554	97239781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26400.7	chr5	+	4140	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	7	3240	7	-3240	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCATTAATAATGGACTC	NA	False	NA	NA	False	ATTAAA	-17	NA	97145554	97236486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26400.8	chr5	+	7348	16	NNC	ENSMUSG00000034663.14	novel	7387	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	7.31938066596712	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTTTGGAGTTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	97145560	97239726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204750_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ES.26401.1	chr5	-	2292	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-28	-7	-5	7	multi-exon	TRUE	canonical	3	15	junction_1	65.5709962983296	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTTGTTCTTCTTCAC	NA	False	NA	NA	False	ATTAAA	-28	NA	97259460	97234831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.10	chr5	-	4027	7	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	4	2660	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.2070002235749	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGCTGCCTGCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	97259451	97241130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97254425_97254722_97256024_97256188_97259117
ES.26401.11	chr5	-	3838	7	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-13	2659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.0579790878073	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTGTGCTGCCTGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97259468	97241131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247554_97249265_97249406_97251218_97251375_97256024_97256188_97259117
ES.26401.12	chr5	-	3767	6	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-6	2659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.304714327856	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTGTGCTGCCTGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97259461	97241131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245456_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.13	chr5	-	3664	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-53	6393	-30	2559	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTCCCGCAGCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	97259485	97241231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.14	chr5	-	3563	6	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-2	2558	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	76.5229377376483	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTCCCGCAGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	97259434	97241232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247554_97251218_97251375_97256024_97256188_97259117
ES.26401.15	chr5	-	3563	6	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	3	2554	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	71.4047617459788	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCCCTTTTCCCGCA	NA	False	NA	NA	False	AATAAA	-16	NA	97259452	97241236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
ES.26401.16	chr5	-	3424	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-46	6626	-23	2326	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTAGTAATGTATATT	NA	False	NA	NA	False	ATTAAA	-30	NA	97259478	97241464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.17	chr5	-	3356	6	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-9	2321	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	76.5229377376483	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCTTTGTAGTAATGT	NA	False	NA	NA	False	ATTAAA	-25	NA	97259464	97241469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247554_97251218_97251375_97256024_97256188_97259117
ES.26401.18	chr5	-	3321	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-51	6734	-28	2218	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCTGTATGTCAGC	NA	False	NA	NA	False	TATAAA	-29	NA	97259483	97241572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.19	chr5	-	1275	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-49	8778	-26	174	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGAGCTTGACCCTT	NA	False	NA	NA	False	TATAAA	-29	NA	97259481	97243616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.2	chr5	-	2227	7	NIC	ENSMUSG00000055725.12	novel	2257	7	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	83.8200784750024	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTTCATCCTCTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	97259467	97234840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
ES.26401.3	chr5	-	183	1	Antisense	novelGene_ENSMUSG00000034663.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97239292	97239109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_97239100_97239300
ES.26401.4	chr5	-	3927	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-208	6285	-185	2667	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTGCCTTCTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	97259640	97241123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ES.26401.5	chr5	-	3708	6	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-33	2663	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	71.4047617459788	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCCTGCCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	97259488	97241127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
ES.26401.6	chr5	-	3690	7	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-12	2663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.9399198069904	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCCTGCCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	97259467	97241127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117_97259145_97259204
ES.26401.7	chr5	-	3542	5	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-2	2663	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	84.1263930048115	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGCCTGCCTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	97259457	97241127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97243920_97245337_97245429_97251218_97251375_97256024_97256188_97259117
ES.26401.8	chr5	-	3572	5	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	1	2661	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	77.2702238899306	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGCTGCCTGCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	97259454	97241129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97259117
ES.26401.9	chr5	-	3695	6	NNC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	-9	2660	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	76.5229377376483	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGCTGCCTGCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	97259464	97241130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_97243920_97245337_97245429_97247404_97247554_97251218_97251375_97256024_97256188_97259117
ES.26402.1	chr5	+	168	1	Intergenic	novelGene_21928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTAATATCATTG	NA	False	NA	NA	False	NA	NA	NA	97276834	97277002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97276800_97277000
ES.26403.1	chr5	+	1734	1	Genic_Genomic	ENSMUSG00000097516.8	novel	NA	NA	NA	NA	-794	-194769	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTTGTTTGTGTATT	NA	False	NA	NA	False	TATAAA	-14	NA	97539481	97541215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_97539500_97541200
ES.26403.2	chr5	+	3236	6	NNC	ENSMUSG00000097516.8	novel	570	5	NA	NA	-22	24889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.4	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTTCTACTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	97540253	97760873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_97540367_97578806_97578923_97581769_97581831_97738458_97738662_97755542_97756276_97758863
ES.26403.3	chr5	+	1391	5	NNC	ENSMUSG00000097516.8	novel	2530	4	NA	NA	-10	3483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.22474487139159	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATAAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	97540265	97739467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_97540367_97543228_97543355_97730074_97730145_97733711_97733797_97738458
ES.26403.4	chr5	+	3487	1	Intergenic	novelGene_21930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-45	NA	97553749	97557236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97553700_97557200
ES.26403.5	chr5	+	9311	1	Intergenic	novelGene_21931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTGAATTGCAAAGATA	NA	False	NA	NA	False	NA	NA	NA	97565374	97574685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97565400_97574700
ES.26403.6	chr5	+	6314	1	Intergenic	novelGene_21932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAGAGTGTGCTTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	97590889	97597203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97590900_97597200
ES.26403.7	chr5	+	198	1	Intergenic	novelGene_21933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGTGATTCCATAGGA	NA	False	NA	NA	False	NA	NA	NA	97608793	97608991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97608800_97609000
ES.26403.8	chr5	+	2815	1	Intergenic	novelGene_21934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGAGGGAAGGGGAGG	1546	False	NA	NA	False	NA	NA	NA	97702352	97705167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97702400_97705200
ES.26404.1	chr5	-	4688	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	47	-1311	47	1311	multi-exon	FALSE	canonical	3	176	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCCATTTACATATGT	NA	False	NA	NA	False	NA	NA	NA	97540191	97528745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.10	chr5	-	1329	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	45	2050	45	-2050	multi-exon	FALSE	canonical	3	176	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCAGTTGCTTTTTGC	NA	False	NA	NA	False	AAGAAA	-39	NA	97540193	97532106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.11	chr5	-	1726	1	Intergenic	novelGene_21929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTCTATTCATACATC	NA	False	NA	NA	False	AAAACA	-5	NA	97535444	97533718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_97533700_97535400
ES.26404.2	chr5	-	3364	1	Genic_Genomic	ENSMUSG00000046000.6	novel	NA	NA	NA	NA	7652	834	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACGCTAAAACTTTTT	NA	False	NA	NA	False	AATAAA	-5	NA	97532586	97529222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_97529200_97532600
ES.26404.3	chr5	-	3756	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	230	-562	230	562	multi-exon	FALSE	canonical	3	176	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGTTTACTTACCTAT	NA	False	NA	NA	False	TTTAAA	-26	NA	97540008	97529494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.4	chr5	-	3484	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-41	-19	-41	19	multi-exon	FALSE	canonical	3	176	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATCTTCTATTGGAAT	NA	False	NA	16	True	AATAAA	-38	NA	97540279	97530037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.5	chr5	-	5864	1	NIC	ENSMUSG00000046000.6	novel	3424	2	NA	NA	4318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGTGAGTTAATAACAT	NA	False	NA	-3	True	AATAAA	-19	NA	97535920	97530056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_97530100_97535900
ES.26404.6	chr5	-	3222	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-27	229	-27	-229	multi-exon	FALSE	canonical	3	176	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTATGTAATGCTGATAC	NA	False	NA	-8	True	AATAAA	-17	NA	97540265	97530285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.7	chr5	-	2329	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-2	1097	-2	-1097	multi-exon	FALSE	canonical	3	176	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTGTCAATATGTCTT	NA	False	NA	0	True	GATAAA	-20	NA	97540240	97531153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.8	chr5	-	1784	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	20	1620	20	-1620	multi-exon	FALSE	canonical	3	176	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTTTGACTTCCCCA	NA	False	NA	NA	False	AGTAAA	-14	NA	97540218	97531676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26404.9	chr5	-	1690	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	-1	1735	-1	-1735	multi-exon	FALSE	canonical	3	176	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTTCAGTATTGACT	NA	False	NA	NA	False	AAAAAG	-16	NA	97540239	97531791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_97532729_97539486
ES.26405.1	chr5	-	4704	4	Antisense	novelGene_ENSMUSG00000097516.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97547887	97540531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_97542604_97543101_97543363_97543814_97543877_97545578
ES.26406.1	chr5	-	213	1	Intergenic	novelGene_21935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	97703434	97703221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_97703200_97703400
ES.26407.1	chr5	-	3334	2	Antisense	novelGene_ENSMUSG00000097516.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATATA	-11	NA	97780947	97777544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_97779048_97779116
ES.26408.1	chr5	+	153	1	Intergenic	novelGene_21936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	97953970	97954123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_97954000_97954100
ES.26409.1	chr5	-	2599	6	Intergenic	novelGene_21937	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTTACAATTTTATT	8814	False	NA	NA	False	ATTAAA	-17	NA	97987231	97968779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_97970620_97972573_97972683_97973315_97973532_97979674_97979799_97980085_97980156_97986991
ES.26409.2	chr5	-	828	5	Intergenic	novelGene_21938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAGATGTTCAAATGTA	8795	False	NA	NA	False	AATAAA	-16	NA	97987250	97970353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_97970620_97972573_97972683_97979674_97979799_97980085_97980156_97986991
ES.2641.1	chr10	-	190	1	Intergenic	novelGene_2011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCAGTTTGCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	40286329	40286139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40286100_40286300
ES.26410.1	chr5	+	178	1	Intergenic	novelGene_21939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGAATTGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	98345303	98345481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_98345300_98345500
ES.26411.1	chr5	-	159	1	Intergenic	novelGene_21940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	98457106	98456947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_98456900_98457100
ES.26412.1	chr5	-	142	1	Intergenic	novelGene_21941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCCAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	98485148	98485006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_98485000_98485100
ES.26413.1	chr5	+	174	1	Intergenic	novelGene_21942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTTAACTTTT	5711	False	NA	NA	False	NA	NA	NA	98489757	98489931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_98489800_98489900
ES.26414.1	chr5	-	178	1	Intergenic	novelGene_21943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAAAAGCGAAGGA	1413	False	NA	NA	False	NA	NA	NA	98511799	98511621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_98511600_98511800
ES.26415.1	chr5	-	178	1	Intergenic	novelGene_21944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	98582852	98582674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_98582700_98582900
ES.26416.1	chr5	-	4994	19	FSM	ENSMUSG00000029334.15	ENSMUST00000161490.8	4968	19	-26	0	-26	0	multi-exon	FALSE	canonical	1	2	junction_7	5.01386965216377	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTCAATGGTGTC	NA	False	NA	2	True	ATTAAA	-29	NA	99185236	99077631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
ES.26416.4	chr5	-	3311	19	FSM	ENSMUSG00000029334.15	ENSMUST00000161490.8	4968	19	162	1495	-154	0	multi-exon	FALSE	canonical	1	2	junction_7	5.01386965216377	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99185048	99079126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
ES.26416.5	chr5	-	1772	9	ISM	ENSMUSG00000029334.15	ENSMUST00000031277.7	2618	19	-195	44419	121	-28746	5prime_fragment	FALSE	canonical	3	9	junction_1	3.83242742918897	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGGATTTATTTGTG	NA	False	NA	NA	False	TTTAAA	-35	NA	99185089	99123997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
ES.26416.6	chr5	-	4003	1	Intergenic	novelGene_21945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAGAAAGGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	99133746	99129743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_99129700_99133700
ES.26417.1	chr5	+	3938	2	Antisense	novelGene_ENSMUSG00000089809.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGCTTCTGTAATGATA	NA	False	NA	NA	False	ATTAAA	-20	NA	99364759	99371612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_99365582_99368496
ES.26417.2	chr5	+	1841	14	Antisense	novelGene_ENSMUSG00000089809.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCCGCCTCCTGCCGC	840	False	NA	NA	False	NA	NA	NA	99366391	99400746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_99366660_99369221_99369293_99370176_99370301_99370798_99370895_99375846_99375945_99377181_99377260_99379949_99380055_99380161_99380257_99381773_99381852_99382337_99382548_99388681_99388820_99389267_99389391_99390922_99391105_99400571
ES.26418.1	chr5	-	2968	14	FSM	ENSMUSG00000089809.10	ENSMUST00000168092.8	2987	14	17	2	17	-2	multi-exon	FALSE	canonical	1	1	junction_13	1.81707874015657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGGAGTTGTGGCGTC	NA	False	NA	-3	True	AATACA	-13	NA	99400769	99365286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382548_99388681_99388820_99389267_99389391_99390922_99391106_99400572
ES.26419.1	chr5	+	2600	1	Intergenic	novelGene_21946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGCCATG	NA	False	NA	NA	False	NA	NA	NA	99797611	99800211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_99797600_99800200
ES.2642.1	chr10	+	156	1	Intergenic	novelGene_2013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	40416044	40416200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40416000_40416200
ES.26420.1	chr5	-	2616	4	NNC	ENSMUSG00000089809.10	novel	2741	2	NA	NA	-146	68015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	99877070	99636370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_99638365_99638879_99638980_99706750_99706805_99876602
ES.26420.2	chr5	-	176	1	Intergenic	novelGene_21947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACTATACATAGAAAT	NA	False	NA	NA	False	NA	NA	NA	99865531	99865355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_99865400_99865500
ES.26421.1	chr5	+	178	1	Intergenic	novelGene_21948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAAACATAG	NA	False	NA	NA	False	NA	NA	NA	99896729	99896907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_99896700_99896900
ES.26422.1	chr5	+	158	1	Intergenic	novelGene_21949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	99956943	99957101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_99956900_99957100
ES.26423.1	chr5	+	178	1	Intergenic	novelGene_21950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTAATAAAATT	4914	False	NA	NA	False	NA	NA	NA	100082820	100082998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100082800_100083000
ES.26424.1	chr5	+	235	1	Intergenic	novelGene_21951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCTAAGTTTCTATTC	NA	False	NA	NA	False	NA	NA	NA	100088811	100089046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100088800_100089000
ES.26425.1	chr5	+	231	1	Intergenic	novelGene_21952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCATAGGCTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	100094944	100095175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100094900_100095200
ES.26426.1	chr5	+	1629	1	Antisense	novelGene_ENSMUSG00000000568.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTGCAGTTCTATT	NA	False	NA	NA	False	AAGAAA	-13	NA	100106788	100108417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100106800_100108400
ES.26427.1	chr5	+	1538	2	NNC	ENSMUSG00000091623.3	novel	2011	2	NA	NA	-31	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATCATCTTTACGAGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100125513	100127511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100125873_100126332
ES.26428.1	chr5	-	6815	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGCACTGTCTTTT	NA	False	NA	1	True	ATTAAA	-19	NA	100126801	100103793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.10	chr5	-	5264	2	NNC	ENSMUSG00000000568.16	novel	737	6	NA	NA	-4	-507	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	0	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTGCCGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	100126801	100104300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100126429
ES.26428.100	chr5	-	1784	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-8	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	1930.66345057211	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126784	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111589_100111745_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.101	chr5	-	1164	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-15	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126812	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126305_100126747
ES.26428.102	chr5	-	1248	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-22	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	1727.50533830653	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126439_100126747
ES.26428.104	chr5	-	5545	2	NIC	ENSMUSG00000000568.16	novel	1104	6	NA	NA	-750	-4	intron_retention	FALSE	canonical	3	4207	junction_1	0	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100114996	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100111943_100112528
ES.26428.105	chr5	-	2525	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	7	-4	intron_retention	FALSE	canonical	3	8	junction_7	1905.19749222358	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123768_100123842_100124392_100124450_100126250
ES.26428.106	chr5	-	1676	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	7	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	1397.96471104722	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115107_100115158_100115247_100124392_100124450_100126250
ES.26428.107	chr5	-	1739	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	1	-4	intron_retention	FALSE	canonical	2	2	junction_3	1482.17692516784	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126775	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111759_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.108	chr5	-	2884	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_6	1870.10830200406	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126820	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123768_100123857_100124392_100124450_100126250
ES.26428.109	chr5	-	4358	7	ISM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	8307	9	-4223	-4	3prime_fragment	FALSE	canonical	3	3192	junction_3	528.004419173426	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100118469	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077
ES.26428.11	chr5	-	6286	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-509	intron_retention	FALSE	canonical	0	0	junction_4	1436.08503730629	2440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTGCCGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100126796	100104302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112543_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.110	chr5	-	3071	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	1	junction_7	1857.52583352755	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100123108_100123768_100123842_100124392_100124450_100126250
ES.26428.111	chr5	-	1352	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-26	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126823	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126491_100126756
ES.26428.112	chr5	-	1734	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_3	1482.72089416721	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111848_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.113	chr5	-	1796	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_7	1717.12194609986	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126797	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100118086_100118144_100124392_100124450_100126250
ES.26428.114	chr5	-	2389	7	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	147	junction_1	1721.96764068189	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126781	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.115	chr5	-	1253	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1497.48955909276	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126790	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115249_100126673
ES.26428.116	chr5	-	1496	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-8	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126784	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126321_100126402
ES.26428.117	chr5	-	1294	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1505.37659324835	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126528	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126312_100126429
ES.26428.118	chr5	-	1089	7	NNC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1793.44721602468	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126795	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126693
ES.26428.119	chr5	-	1465	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126779	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126604_100126711
ES.26428.12	chr5	-	6131	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	8	-509	intron_retention	FALSE	canonical	1	15	junction_1	1501.32041362762	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTGCCGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100126785	100104302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.120	chr5	-	3953	7	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-5	intron_retention	FALSE	canonical	3	2301	junction_5	764.999219316958	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATGTATTGGCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100126796	100108866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100115247_100124392_100124450_100126250
ES.26428.121	chr5	-	2776	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	2301	junction_6	799.800230159548	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATGTATTGGCTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	100126801	100108867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100115247_100124392_100124450_100126250
ES.26428.122	chr5	-	1573	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-1	-6	intron_retention	FALSE	canonical	0	0	junction_3	1625.23949883438	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATGTATTGGCTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	100126795	100108867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112543_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.123	chr5	-	1657	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-2	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	1368.77718580308	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTATTGGCTCT	NA	False	NA	NA	False	AATAAA	-9	NA	100126799	100108868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114047_100115162_100115247_100124392_100124450_100126250
ES.26428.126	chr5	-	1437	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-34	134	-31	15	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATTTGTGTTTTATGCC	NA	False	NA	10	True	NA	NA	NA	100126828	100108994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.127	chr5	-	1645	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-52	5218	-52	-2	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126849	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.128	chr5	-	1580	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-135	555	-134	-2	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126931	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.129	chr5	-	1670	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-155	155	-134	-2	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126931	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.130	chr5	-	2800	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	2301	junction_6	866.95323885856	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126823	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.131	chr5	-	1494	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	1394.63690570895	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126809	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126283_100126393
ES.26428.132	chr5	-	2558	6	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	8	-2	intron_retention	FALSE	canonical	3	1409	junction_1	1386.53083629611	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126785	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.133	chr5	-	718	2	NNC	ENSMUSG00000000568.16	novel	737	6	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	23	junction_1	0	2408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTATGCTTCAGTATC	NA	False	NA	-7	True	ATTAAA	-29	NA	100126809	100109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100126272
ES.26428.135	chr5	-	2379	8	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-8	0	intron_retention	FALSE	canonical	3	147	junction_1	1502.85798479064	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTCTTAATTG	NA	False	NA	-22	True	ATTAAA	-14	NA	100126784	100109026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.136	chr5	-	4700	7	ISM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	7804	170	-4726	0	3prime_fragment	FALSE	canonical	3	3192	junction_3	528.004419173426	2407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTCTTAATTG	NA	False	NA	-22	True	ATTAAA	-14	NA	100118972	100109026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077
ES.26428.137	chr5	-	1539	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	104	junction_1	1712.55153207137	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTCTTAATTG	NA	False	NA	-22	True	ATTAAA	-14	NA	100126798	100109026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.138	chr5	-	2690	7	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	1800	junction_6	957.186270041289	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTCTTAATTG	NA	False	NA	-22	True	ATTAAA	-14	NA	100126785	100109026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.139	chr5	-	2601	7	NIC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	1409	junction_1	1230.02173648364	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTATTTCTTAATTG	NA	False	NA	-22	True	ATTAAA	-14	NA	100126786	100109026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.14	chr5	-	6380	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-226	-4154	-225	-509	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTGCCGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100127022	100104302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.140	chr5	-	2436	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	7	-2	intron_retention	FALSE	canonical	3	147	junction_1	1378.68265361359	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTATTTCTTAAT	NA	False	NA	-24	True	ATTAAA	-12	NA	100126786	100109028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.141	chr5	-	783	3	NNC	ENSMUSG00000000568.16	novel	699	6	NA	NA	-8	-2	intron_retention	FALSE	canonical	2	4	junction_2	50	2408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTATTTCTTAAT	NA	False	NA	-24	True	ATTAAA	-12	NA	100126784	100109028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100109956_100110064_100126272
ES.26428.142	chr5	-	1585	9	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	-12	239	intron_retention	FALSE	canonical	3	147	junction_1	1378.68265361359	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGCCTTCACTTATT	NA	False	NA	-7	True	AATAAA	-12	NA	100126809	100109902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.143	chr5	-	1358	7	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	7	239	intron_retention	FALSE	canonical	3	147	junction_1	1721.96764068189	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGCCTTCACTTATT	NA	False	NA	-7	True	AATAAA	-12	NA	100126786	100109902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.144	chr5	-	1428	8	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	-2	239	intron_retention	FALSE	canonical	3	147	junction_1	1566.77197069748	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGCCTTCACTTATT	NA	False	NA	-7	True	AATAAA	-12	NA	100126799	100109902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.145	chr5	-	1540	8	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	-26	237	intron_retention	FALSE	canonical	3	147	junction_1	1502.85798479064	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTTGCCTTCACTTA	NA	False	NA	-9	True	AATAAA	-10	NA	100126823	100109904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.15	chr5	-	6027	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-31	-509	intron_retention	FALSE	canonical	1	15	junction_1	1723.827966226	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTGCCGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100126828	100104302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.16	chr5	-	6096	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-1	-4558	-1	-509	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAATTGCCGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100126795	100104302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.17	chr5	-	6201	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-2	-510	intron_retention	FALSE	canonical	1	15	junction_1	1394.12529326934	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATAATTGCCGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	100126799	100104303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.18	chr5	-	5759	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-23	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1497.48955909276	2440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGAAATAATTGCCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	100126820	100104306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126755
ES.26428.19	chr5	-	5359	7	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	45	-516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1516.47681046123	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAATGAAATAATTGCC	NA	False	NA	NA	False	AATAAA	-10	NA	100113988	100104309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106073_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880
ES.26428.2	chr5	-	6559	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	15	junction_1	1587.76367888927	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTGCACTGTCTTT	NA	False	NA	0	True	ATTAAA	-18	NA	100126795	100103794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.20	chr5	-	3599	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	10	-2072	-8	1668	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTACTCTTCAACCCTGG	NA	False	NA	NA	False	NA	NA	NA	100126784	100106788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.21	chr5	-	3112	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-1	3700	-1	963	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAATAGTAGATAAAT	NA	False	NA	NA	False	ATTAAA	-8	NA	100126798	100107493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.22	chr5	-	2697	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-25	-1135	-22	731	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTAGTATTAGCTAG	NA	False	NA	NA	False	AATAAA	-16	NA	100126819	100107725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.23	chr5	-	2809	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-8	-1131	-8	731	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTAGTATTAGCTAG	NA	False	NA	NA	False	AATAAA	-16	NA	100126784	100107725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.24	chr5	-	2021	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-3	-18	-2	18	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGAACTGCAGCTAGTT	NA	False	NA	8	True	AATAAA	-33	NA	100126799	100108438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.25	chr5	-	2136	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-65	-401	-44	1	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATCTATTAATTTAAA	NA	False	NA	-9	True	AATAAA	-16	NA	100126841	100108455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.26	chr5	-	2158	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-10	4663	-10	0	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCTATTAATTTAA	NA	False	NA	-10	True	AATAAA	-15	NA	100126807	100108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.27	chr5	-	1966	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-25	-404	-22	0	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCTATTAATTTAA	NA	False	NA	-10	True	AATAAA	-15	NA	100126819	100108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.28	chr5	-	928	3	ISM	ENSMUSG00000000568.16	ENSMUST00000164833.2	699	6	2151	-570	2151	0	3prime_fragment	FALSE	canonical	3	104	junction_1	21.5	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCTATTAATTTAA	NA	False	NA	-10	True	AATAAA	-15	NA	100110458	100108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100109193_100109956_100110064_100110373
ES.26428.29	chr5	-	1575	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	-36	-2	-33	-2	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTCTTTTATCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	100126830	100108858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.3	chr5	-	6719	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	15	junction_1	1394.12529326934	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTTTTGCACTGTCTT	NA	False	NA	-1	True	ATTAAA	-17	NA	100126809	100103795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.30	chr5	-	1945	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-199	5065	-199	-2	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTCTTTTATCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	100126996	100108858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.31	chr5	-	2602	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	147	junction_1	1378.68265361359	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126784	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.32	chr5	-	2953	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-28	0	intron_retention	FALSE	canonical	3	2301	junction_6	866.95323885856	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126825	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.33	chr5	-	4590	5	ISM	ENSMUSG00000000568.16	ENSMUST00000168396.2	1104	6	10003	-1281	-2234	0	3prime_fragment	FALSE	canonical	3	3192	junction_2	450.348961917311	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100116480	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880
ES.26428.34	chr5	-	8888	6	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	2597	0	intron_retention	FALSE	canonical	3	3192	junction_2	555.204250704189	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100121813	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077
ES.26428.35	chr5	-	3017	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-15	0	intron_retention	FALSE	canonical	2	3	junction_7	1737.16140585727	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126812	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100123108_100124392_100124450_100126250
ES.26428.37	chr5	-	3035	7	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	2301	junction_5	925.297189495834	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126801	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.38	chr5	-	11454	4	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	919	0	intron_retention	FALSE	canonical	3	1409	junction_1	1326.83642130026	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100123491	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880
ES.26428.39	chr5	-	3100	7	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-232	0	intron_retention	FALSE	canonical	3	1800	junction_6	957.186270041289	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100127029	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.4	chr5	-	6645	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	15	-4660	-5	-3	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTTTTGCACTGTCT	NA	False	NA	-2	True	ATTAAA	-16	NA	100126781	100103796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.40	chr5	-	2741	6	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-20	0	intron_retention	FALSE	canonical	3	1409	junction_1	1386.53083629611	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126817	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.41	chr5	-	6573	1	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1187	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2408	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100115433	100108860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100108900_100115400
ES.26428.42	chr5	-	1638	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	-46	408	-45	-3	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126842	100108864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.43	chr5	-	1015	7	NNC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1793.44721602468	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126786	100108864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126760
ES.26428.44	chr5	-	1817	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-155	8	-134	-3	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126931	100108864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.45	chr5	-	2543	8	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	7	-3	intron_retention	FALSE	canonical	3	147	junction_1	1502.85798479064	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126786	100108864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.46	chr5	-	2959	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_6	1742.95470663325	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATTGGCTCTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	100126778	100108864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100118086_100118144_100124392_100124450_100126250
ES.26428.47	chr5	-	2446	8	NIC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	147	junction_1	1566.77197069748	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126780	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.49	chr5	-	4711	7	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	6	-4	intron_retention	FALSE	canonical	3	2301	junction_6	804.891590353771	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126787	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392
ES.26428.5	chr5	-	6649	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-3	intron_retention	FALSE	canonical	1	15	junction_1	1501.32041362762	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTTTTGCACTGTCT	NA	False	NA	-2	True	ATTAAA	-16	NA	100126797	100103796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.50	chr5	-	2777	7	NIC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	1409	junction_1	1230.02173648364	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126801	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.51	chr5	-	1414	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126776	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126283_100126439
ES.26428.52	chr5	-	4235	6	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	7	-4	intron_retention	FALSE	canonical	3	2301	junction_4	959.442421409435	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100110472_100111589_100111943_100112528_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.53	chr5	-	1646	8	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	104	junction_1	1844.95411148066	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126801	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.54	chr5	-	1834	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	8	junction_8	1709.45476109984	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123768_100123842_100124392_100124450_100126250
ES.26428.55	chr5	-	1240	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	591	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	1451.46632754604	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100125892	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100125844
ES.26428.56	chr5	-	1555	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1505.37659324835	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126782	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126294_100126405
ES.26428.58	chr5	-	1157	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1727.50533830653	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126333_100126711
ES.26428.59	chr5	-	4286	8	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	26	junction_6	1475.32831351298	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126801	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100124450_100126250
ES.26428.6	chr5	-	6522	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-22	-5	intron_retention	FALSE	canonical	1	15	junction_1	1723.827966226	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTTTTTTGCACTGT	NA	False	NA	-4	True	ATTAAA	-14	NA	100126819	100103798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.61	chr5	-	1770	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	104	junction_1	1723.73333476353	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126778	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.62	chr5	-	840	2	NNC	ENSMUSG00000000568.16	novel	737	6	NA	NA	8	-4	intron_retention	FALSE	canonical	3	23	junction_1	0	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126785	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100126272
ES.26428.63	chr5	-	2667	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	7	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	1544.70065787808	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126292_100126476
ES.26428.64	chr5	-	3527	8	ISM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	13	5072	-8	-4	intron_retention	FALSE	canonical	3	2301	junction_7	781.917319080189	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126784	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392
ES.26428.65	chr5	-	1518	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-37	-4	at_least_one_novel_splicesite	TRUE	canonical	1	13	junction_8	1588.22831718239	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126834	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126283_100126393
ES.26428.66	chr5	-	2915	8	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	1441.74941919707	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126801	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112663_100113891_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.68	chr5	-	2134	6	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-13	-4	intron_retention	FALSE	canonical	3	1409	junction_2	1410.57301831561	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126810	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100110373_100110472_100111842_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.69	chr5	-	1597	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-13	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	1679.91766076161	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126810	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124400_100124450_100126250
ES.26428.7	chr5	-	6074	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-13	-501	intron_retention	FALSE	canonical	1	15	junction_1	1587.76367888927	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTTTTTGTTGTTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	100126810	100104294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.70	chr5	-	1538	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1497.48955909276	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126796	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126393
ES.26428.72	chr5	-	1685	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	-4	intron_retention	TRUE	non_canonical	0	0	junction_9	1397.96471104722	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126796	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126439_100126491
ES.26428.73	chr5	-	1817	10	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	2	3	junction_8	1711.56444211317	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100123108_100124392_100124450_100126250
ES.26428.74	chr5	-	2852	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	1418.28673053089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126325_100126393
ES.26428.76	chr5	-	1333	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1591.25186076089	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126779	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250_100126426_100126666
ES.26428.77	chr5	-	1794	10	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-5	-4	intron_retention	FALSE	canonical	2	25	junction_1	1619.1236388938	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126781	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100109992_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.78	chr5	-	1681	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-6	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	1436.08503730629	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126782	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112571_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.8	chr5	-	6272	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	-43	-4559	-22	-504	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGCCGTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	100126819	100104297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.80	chr5	-	3374	7	ISM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	18	409	-2	-4	intron_retention	FALSE	canonical	3	1409	junction_2	1235.38523006658	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126778	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392
ES.26428.81	chr5	-	1629	8	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-22	-4	intron_retention	FALSE	canonical	2	2	junction_4	1463.88641245536	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.82	chr5	-	1654	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	14	-4	intron_retention	FALSE	canonical	0	0	junction_3	1609.08924677335	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126762	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111835_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.84	chr5	-	1509	7	NNC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	1784.12141465266	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126778	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111936_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.85	chr5	-	1371	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	1727.50533830653	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126529_100126693
ES.26428.86	chr5	-	1549	7	NIC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	0	-4	intron_retention	FALSE	canonical	2	2	junction_4	1614.2593502904	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126796	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100113880_100114043_100115077_100115247_100126250
ES.26428.87	chr5	-	2872	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	-22	-4	intron_retention	FALSE	canonical	2	3	junction_6	1870.65387454958	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100123108_100124392_100124450_100126250
ES.26428.88	chr5	-	3031	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_7	1736.57021435213	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126820	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123768_100123857_100124392_100124450_100126250
ES.26428.9	chr5	-	6334	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	-29	506	-29	-506	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTGCCGTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	100126826	100104299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.90	chr5	-	998	7	NNC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1793.44721602468	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126780	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115233_100126756
ES.26428.91	chr5	-	3182	6	NNC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	2644	-4	intron_retention	FALSE	canonical	0	0	junction_5	1872.5180266155	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100121766	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100120753
ES.26428.92	chr5	-	1560	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_1	1602.53749040803	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126774	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109184_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.93	chr5	-	1647	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-37	-4	intron_retention	FALSE	canonical	1	24	junction_5	1552.86233406939	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126834	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112589_100113880_100114043_100115077_100115247_100126250
ES.26428.94	chr5	-	1650	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	1606.05869463486	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126796	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110448_100111596_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26428.95	chr5	-	1894	11	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	1	junction_8	1851.2981283413	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126802	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100123030_100123108_100123768_100123842_100124392_100124450_100126250
ES.26428.96	chr5	-	1546	7	NNC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_4	1779.59971310654	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126819	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113891_100114043_100115077_100115247_100126250
ES.26428.97	chr5	-	1442	8	NNC	ENSMUSG00000000568.16	novel	2000	8	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1727.50533830653	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126786	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250_100126294_100126375
ES.26428.98	chr5	-	1936	10	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	-90	-4	intron_retention	FALSE	canonical	3	104	junction_1	1604.44424438287	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126887	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ES.26428.99	chr5	-	1677	8	NNC	ENSMUSG00000000568.16	novel	1670	8	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_3	1609.08924677335	2409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	100126798	100108865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100109193_100110373_100110472_100111589_100111737_100111848_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ES.26429.1	chr5	+	167	1	Intergenic	novelGene_21953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAATCTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	100161589	100161756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100161600_100161800
ES.2643.1	chr10	+	1736	4	ISM	ENSMUSG00000019834.16	ENSMUST00000078314.14	2269	8	26	18300	26	-18296	5prime_fragment	FALSE	canonical	1	1	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTGTAGAACTAACTT	1512	False	NA	NA	False	AATAAA	-19	NA	40446357	40461828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_40446518_40449618_40450099_40457293_40457412_40460850
ES.2643.2	chr10	+	2225	8	FSM	ENSMUSG00000019834.16	ENSMUST00000078314.14	2269	8	40	4	40	0	multi-exon	FALSE	canonical	1	1	junction_2	1.60356745147455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTTGTGCACTGTGT	1526	False	NA	NA	False	AATAAA	-18	NA	40446371	40480124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40446518_40449618_40450099_40457293_40457412_40460850_40461383_40463497_40463626_40467779_40467890_40471251_40471352_40479513
ES.2643.3	chr10	+	1482	5	NNC	ENSMUSG00000019834.16	novel	2269	8	NA	NA	14252	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCTTTGTGCACT	NA	False	NA	NA	False	AATAAA	-14	NA	40460860	40480120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40461383_40463497_40463626_40467764_40467890_40471251_40471352_40479513
ES.26430.1	chr5	-	968	1	Intergenic	novelGene_21954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATTTTTCTGCTA	NA	False	NA	NA	False	NA	NA	NA	100170775	100169807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100169800_100170800
ES.26430.2	chr5	-	176	1	Intergenic	novelGene_21955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100170774	100170598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100170600_100170800
ES.26431.1	chr5	-	2408	1	Intergenic	novelGene_21956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTCTATGACAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	100173892	100171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100171500_100173900
ES.26432.1	chr5	+	2787	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-973	10	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACGTGTGGATTGTG	NA	False	NA	25	True	AATAAA	-25	NA	100186870	100216629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.10	chr5	+	1616	6	NNC	ENSMUSG00000029326.14	novel	744	2	NA	NA	442	0	intron_retention	FALSE	canonical	1	5	junction_1	196.457018199911	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100188368	100216619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100188470_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.11	chr5	+	1544	6	NNC	ENSMUSG00000029326.14	novel	744	2	NA	NA	4187	3	intron_retention	FALSE	canonical	0	0	junction_1	198.451404630957	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCATACAGACGTGTG	NA	False	NA	18	True	AATAAA	-18	NA	100192113	100216622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100192140_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.12	chr5	+	1575	6	NNC	ENSMUSG00000029326.14	novel	744	2	NA	NA	4274	10	intron_retention	FALSE	canonical	0	0	junction_1	198.451404630957	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACGTGTGGATTGTG	NA	False	NA	25	True	AATAAA	-25	NA	100192200	100216629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100192251_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.13	chr5	+	1826	5	ISM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	18783	2	-3144	-2	intron_retention	FALSE	canonical	3	471	junction_2	16.5283846760656	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACAGTTTCATACAGAC	749	False	NA	13	True	AATAAA	-13	NA	100206685	100216617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.2	chr5	+	2844	7	NNC	ENSMUSG00000029326.14	novel	1420	7	NA	NA	-949	-2	intron_retention	FALSE	canonical	0	0	junction_1	233.382375798459	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACAGTTTCATACAGAC	NA	False	NA	13	True	AATAAA	-13	NA	100186894	100216617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100188162_100206000_100206065_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.3	chr5	+	2786	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	-941	-12	-941	12	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACGTGTGGATTGTGCC	NA	False	NA	27	True	AATAAA	-27	NA	100186902	100216631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.4	chr5	+	1462	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	-48	6	11	-6	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCATACAGTTTCATAC	NA	False	NA	9	True	AATAAA	-9	NA	100187854	100216613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
ES.26432.5	chr5	+	2763	5	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	20	4	intron_retention	FALSE	canonical	3	76	junction_1	184.982431598247	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCATACAGACGTGTGG	NA	False	NA	19	True	AATAAA	-19	NA	100187863	100216623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100188133_100206998_100207101_100208832_100210135_100211617_100211742_100215657
ES.26432.6	chr5	+	3663	1	NIC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-29	-17679	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGTACTTTGTATTGCTG	NA	False	NA	NA	False	CATAAA	-16	NA	100187873	100191536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100187900_100191500
ES.26432.7	chr5	+	1946	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	50	-163	-9	163	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGATTCAAACGTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	100187893	100216782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ES.26432.8	chr5	+	5645	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_5	193.255685556726	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTCATACAGACGTG	NA	False	NA	16	True	AATAAA	-16	NA	100187896	100216620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211832_100211883
ES.26432.9	chr5	+	2301	6	NIC	ENSMUSG00000029326.14	novel	1420	7	NA	NA	-4	-74	intron_retention	FALSE	canonical	3	27	junction_5	186.9149539229	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCACTGTTTATTCTGA	NA	False	NA	4	True	TATAAA	-15	NA	100187922	100216545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100188162_100206998_100207101_100208832_100210135_100211617_100211742_100215657_100215801_100216154
ES.26433.1	chr5	-	1223	9	NNC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-15	5019	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	483.254833783378	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAACAAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	100186769	100176416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100176452_100183438_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185072_100185426_100185589_100185671_100185841_100186578
ES.26433.10	chr5	-	3467	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-711	-4	-269	4	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCTTGCTATGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	100187792	100181431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.11	chr5	-	4831	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-231	2	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAAGTCTTGCTATGT	NA	False	NA	-12	True	AATAAA	-20	NA	100187754	100181433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.12	chr5	-	4679	7	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-218	2	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAAGTCTTGCTATGT	NA	False	NA	-12	True	AATAAA	-20	NA	100187741	100181433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.14	chr5	-	3341	8	FSM	ENSMUSG00000029328.16	ENSMUST00000149384.8	1477	8	-15	-1849	-15	0	multi-exon	FALSE	canonical	3	110	junction_7	409.537668646996	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.15	chr5	-	3358	6	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	151	junction_1	349.641759519655	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186739	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.16	chr5	-	5226	2	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	934	junction_1	0	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184836_100184943
ES.26433.17	chr5	-	3546	5	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	572	junction_1	202.567735584915	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186769	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184511_100184720_100184836_100184943_100185076_100185426
ES.26433.18	chr5	-	4181	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-232	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100187755	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.2	chr5	-	5704	7	ISM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	757	-2971	404	2971	3prime_fragment	FALSE	canonical	3	572	junction_1	200.695803532499	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTGCTGTTTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	100186324	100178464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.20	chr5	-	4664	5	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	216	0	intron_retention	FALSE	canonical	3	151	junction_1	381.713570625934	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100187307	100181435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.21	chr5	-	3697	9	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-261	-9	combination_of_known_junctions	FALSE	canonical	3	110	junction_8	425.280771226492	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100187784	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.22	chr5	-	4720	6	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	15	-9	intron_retention	FALSE	canonical	3	110	junction_5	383.038588134407	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100187508	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.25	chr5	-	4595	4	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	20	-9	intron_retention	FALSE	canonical	3	934	junction_2	91.7327034862098	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186708	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426
ES.26433.27	chr5	-	3018	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-18	-9	intron_retention	FALSE	canonical	3	151	junction_2	390.181759639729	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186772	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100183599_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.28	chr5	-	2410	8	NNC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	375.482437970792	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186769	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184741_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.29	chr5	-	3185	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	-9	intron_retention	FALSE	canonical	3	244	junction_1	304.783347459944	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186769	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.3	chr5	-	3480	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-168	-1163	-168	13	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTATGTATGACTTTAAG	NA	False	NA	-1	True	AATAAA	-31	NA	100187691	100181422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.31	chr5	-	2714	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-13	-9	intron_retention	FALSE	canonical	3	572	junction_1	190.702793780153	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186767	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.32	chr5	-	2364	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	3	110	junction_6	400.782429200128	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	False	NA	-23	True	AATAAA	-9	NA	100186727	100181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.33	chr5	-	3528	6	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-19	-10	intron_retention	FALSE	canonical	3	110	junction_5	437.64213691097	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATCTCAGTTAA	NA	False	NA	-24	True	AATAAA	-8	NA	100186773	100181445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.34	chr5	-	3709	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	-135	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGAATAGGAGGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100186769	100181570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.35	chr5	-	3291	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-674	135	-232	-135	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGAATAGGAGGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100187755	100181570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.36	chr5	-	3570	7	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-15	-135	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGAATAGGAGGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100186769	100181570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.37	chr5	-	3033	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-654	373	-212	-373	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCTTAGAGGTCTCT	NA	False	NA	NA	False	AATAAA	-22	NA	100187735	100181808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.38	chr5	-	5056	4	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	15	-373	intron_retention	FALSE	canonical	3	941	junction_2	95.1034524434664	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCTTAGAGGTCTCT	NA	False	NA	NA	False	AATAAA	-22	NA	100187508	100181808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100185076_100185426_100185589_100185671
ES.26433.39	chr5	-	3184	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-42	-768	-16	-376	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGGCTTAGAGGTC	NA	False	NA	NA	False	AATAAA	-19	NA	100186770	100181811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.4	chr5	-	5331	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	15	10	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGTATGACTTT	NA	False	NA	-4	True	AATAAA	-28	NA	100187508	100181425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.40	chr5	-	2252	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	-376	intron_retention	FALSE	canonical	3	230	junction_2	361.872849470188	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGGCTTAGAGGTC	NA	False	NA	NA	False	AATAAA	-19	NA	100186769	100181811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185841_100186578
ES.26433.41	chr5	-	2167	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	-772	-15	-378	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTGGCTTAGAGG	NA	False	NA	NA	False	AATAAA	-17	NA	100186769	100181813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.42	chr5	-	3811	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-295	62	intron_retention	FALSE	canonical	3	934	junction_2	94.4681957062799	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGACGCAGCTTATTTTG	NA	False	NA	48	True	TATAAA	-15	NA	100187818	100182517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.43	chr5	-	2484	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-269	-66	-269	60	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGACGCAGCTTATTT	NA	False	NA	46	True	TATAAA	-13	NA	100187792	100182519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.44	chr5	-	2342	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-674	1084	-232	60	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGACGCAGCTTATTT	NA	False	NA	46	True	TATAAA	-13	NA	100187755	100182519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.45	chr5	-	2671	8	NNC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-182	1	intron_retention	FALSE	non_canonical	0	0	junction_7	374.995129220068	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTCAGGTACTGCAT	NA	False	NA	-13	True	AATAAA	-22	NA	100187705	100182578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578_100186902_100187582
ES.26433.46	chr5	-	4139	6	ISM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-1026	-1	-231	1	intron_retention	FALSE	canonical	3	934	junction_3	96.8949947107693	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTCAGGTACTGCAT	NA	False	NA	-13	True	AATAAA	-22	NA	100187754	100182578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.47	chr5	-	3205	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	53	1	intron_retention	FALSE	canonical	3	244	junction_1	315.062119095408	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTCAGGTACTGCAT	NA	False	NA	-13	True	AATAAA	-22	NA	100187470	100182578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.48	chr5	-	3885	6	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	-284	1	intron_retention	FALSE	canonical	3	110	junction_5	383.038588134407	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTCAGGTACTGCAT	NA	False	NA	-13	True	AATAAA	-22	NA	100187807	100182578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.5	chr5	-	3282	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	63	5	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTCTTGCTATGTATG	NA	False	NA	-9	True	AATAAA	-23	NA	100187460	100181430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.50	chr5	-	3516	7	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-201	0	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187724	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.51	chr5	-	2412	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-216	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187739	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.52	chr5	-	3339	5	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-170	0	intron_retention	FALSE	canonical	3	151	junction_2	371.466351100608	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187693	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100184055_100184720_100184836_100184943_100185076_100185426
ES.26433.53	chr5	-	2901	8	FSM	ENSMUSG00000029328.16	ENSMUST00000149384.8	1477	8	-719	-705	50	0	multi-exon	FALSE	canonical	3	110	junction_7	409.537668646996	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187473	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.54	chr5	-	4494	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-302	0	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187825	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.55	chr5	-	5052	2	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-216	0	intron_retention	FALSE	canonical	3	934	junction_1	0	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187739	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184836_100184943
ES.26433.56	chr5	-	1229	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_3	399.541676199628	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186768	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.57	chr5	-	3485	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-1111	0	-316	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187839	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.59	chr5	-	3868	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-204	0	intron_retention	FALSE	canonical	3	934	junction_1	88.3246851112417	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187727	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.6	chr5	-	5670	4	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-119	5	intron_retention	FALSE	canonical	3	934	junction_1	101.156644204257	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTCTTGCTATGTATG	NA	False	NA	-9	True	AATAAA	-23	NA	100187642	100181430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.60	chr5	-	1310	8	NNC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	374.995129220068	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100182841_100183945_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.61	chr5	-	1125	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_2	333.583281289029	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.62	chr5	-	1621	9	NNC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	456.497929212171	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187632	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185790_100186655_100186911_100187320
ES.26433.63	chr5	-	2525	9	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-224	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_8	425.280771226492	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187747	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.65	chr5	-	3093	4	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	151	junction_1	430.841811650943	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186772	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184720_100185076_100185426_100185589_100185671
ES.26433.66	chr5	-	4517	4	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-242	0	intron_retention	FALSE	canonical	3	934	junction_2	91.7327034862098	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187765	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426
ES.26433.67	chr5	-	3036	8	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-231	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187754	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.68	chr5	-	3949	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-213	0	intron_retention	FALSE	canonical	3	151	junction_1	381.713570625934	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187736	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.69	chr5	-	1204	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	392.844328795347	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186769	100182579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.7	chr5	-	2273	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-15	4	combination_of_known_splicesites	FALSE	canonical	3	151	junction_2	333.583281289029	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCTTGCTATGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	100186769	100181431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.72	chr5	-	3097	8	ISM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	-205	-5	-205	-1	intron_retention	FALSE	canonical	3	230	junction_2	378.694696912153	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGTCAGGTACTGC	NA	False	NA	-15	True	AATAAA	-20	NA	100187728	100182580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.73	chr5	-	3390	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-213	-1	intron_retention	FALSE	canonical	3	230	junction_2	387.589308704745	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGTCAGGTACTGC	NA	False	NA	-15	True	AATAAA	-20	NA	100187736	100182580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100183599_100183962_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.75	chr5	-	4166	5	ISM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-972	1	-177	-1	intron_retention	FALSE	canonical	3	934	junction_3	93.9131912991993	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGTCAGGTACTGC	NA	False	NA	-15	True	AATAAA	-20	NA	100187700	100182580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426
ES.26433.76	chr5	-	1270	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	110	junction_6	400.782429200128	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGCGTCAGGTACTG	NA	False	NA	-16	True	AATAAA	-19	NA	100186770	100182581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.77	chr5	-	3219	7	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	15	-2	intron_retention	FALSE	canonical	3	110	junction_6	419.893802711537	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGCGTCAGGTACTG	NA	False	NA	-16	True	AATAAA	-19	NA	100187508	100182581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100183599_100183962_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.78	chr5	-	2200	8	NNC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	388.442993479962	881	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTGCGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	100187753	100182582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185764_100186578
ES.26433.79	chr5	-	2113	7	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	218	2	intron_retention	FALSE	canonical	3	572	junction_1	190.702793780153	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTGCGTCAGGTAC	NA	False	NA	-18	True	AATAAA	-17	NA	100187305	100182583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183962_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.8	chr5	-	4266	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-744	-1148	51	4	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCTTGCTATGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	100187472	100181431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.80	chr5	-	3768	6	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-231	1	intron_retention	FALSE	canonical	3	244	junction_1	331.245890540547	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTGCGTCAGGTA	NA	False	NA	-19	True	AATAAA	-16	NA	100187754	100182584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100182844_100183493_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.83	chr5	-	1457	8	NNC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	447.962963119197	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTCCTGCGTCAGGT	NA	False	NA	-20	True	AATAAA	-15	NA	100186769	100182585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100182844_100183406_100183599_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.85	chr5	-	4055	2	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	1152	junction_1	0	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTCCTGCGTCAGGT	NA	False	NA	-20	True	AATAAA	-15	NA	100186723	100182585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100185589_100185671
ES.26433.86	chr5	-	3012	4	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	941	junction_1	91.193323342349	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTCCTGCGTCAGGT	NA	False	NA	-20	True	AATAAA	-15	NA	100186769	100182585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.89	chr5	-	1440	8	FSM	ENSMUSG00000029328.16	ENSMUST00000149384.8	1477	8	-15	52	-15	-52	multi-exon	FALSE	canonical	3	110	junction_7	409.537668646996	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTTTGGTCTTCTGTT	NA	False	NA	93	True	CATAAA	-17	NA	100186769	100183336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ES.26433.9	chr5	-	5256	6	ISM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	-996	-1148	-201	4	intron_retention	FALSE	canonical	3	934	junction_3	96.8949947107693	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCTTGCTATGTAT	NA	False	NA	-10	True	AATAAA	-22	NA	100187724	100181431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
ES.26433.90	chr5	-	1292	8	ISM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	754	753	-15	-54	5prime_fragment	FALSE	canonical	3	230	junction_1	297.206243239284	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCATTTTGGTCTTCTG	NA	False	NA	91	True	CATAAA	-15	NA	100186769	100183338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.91	chr5	-	1930	8	ISM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	15	854	15	-155	5prime_fragment	FALSE	canonical	3	230	junction_1	297.206243239284	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGGCTTCTTTTTTA	NA	False	NA	-10	True	ATTAAA	-13	NA	100187508	100183439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ES.26433.93	chr5	-	1596	1	Genic_Genomic	ENSMUSG00000029328.16	novel	NA	NA	NA	NA	-269	-2378	mono-exon	FALSE	NA	NA	NA	NA	NA	722	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCACCAGTAGACGACTG	NA	False	NA	NA	False	NA	NA	NA	100187792	100186196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_100186200_100187800
ES.26434.1	chr5	+	4241	1	Intergenic	novelGene_21957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACTAAGACACTGCGT	NA	False	NA	NA	False	AAAAAG	-4	NA	100220917	100225158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100220900_100225200
ES.26435.1	chr5	+	4865	3	NNC	ENSMUSG00000100157.7	novel	508	3	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCCCATTCGACTGGGG	NA	False	NA	NA	False	AATAAA	-10	NA	100358553	100364597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100363234_100363664_100363725_100364472
ES.26435.2	chr5	+	3085	2	ISM	ENSMUSG00000100157.7	ENSMUST00000188902.2	508	3	2198	3	2198	-3	3prime_fragment	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCCCATTCGACTGGGG	NA	False	NA	NA	False	AATAAA	-10	NA	100360764	100364597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100363725_100364472
ES.26436.1	chr5	-	1516	2	Intergenic	novelGene_21958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATTTGTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	100385545	100381926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100383183_100385285
ES.26437.1	chr5	-	207	1	Intergenic	novelGene_21959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCAGAGACCTCGAGC	NA	False	NA	NA	False	NA	NA	NA	100431959	100431752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100431800_100432000
ES.26438.1	chr5	+	1436	2	Antisense	novelGene_ENSMUSG00000085915.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACGGCCTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	100462362	100466099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100462549_100464849
ES.26438.2	chr5	+	3670	1	Intergenic	novelGene_21960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGCCTTTGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	100462432	100466102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100462400_100466100
ES.26439.1	chr5	+	1121	5	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.12132034355964	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTCTGCCTCCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	100501469	100511210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100501578_100503444_100503628_100503930_100504025_100508755_100508986_100510704
ES.26439.11	chr5	+	6781	7	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGCACTGAAAAGCTA	3029	False	NA	NA	False	NA	NA	NA	100521472	100538247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531783_100532982_100533164_100533987
ES.26439.12	chr5	+	3474	21	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCACCTCCACGCTCCG	3029	False	NA	NA	False	NA	NA	NA	100521472	100564049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100521575_100523066_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531783_100532982_100533164_100533988_100534063_100536389_100536966_100538617_100538687_100540248_100540490_100540722_100540875_100541061_100541221_100543657_100543760_100547204_100547349_100550074_100550215_100551873_100551968_100553300_100553498_100555011_100555136_100555887_100555973_100563761
ES.26439.13	chr5	+	5289	8	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGCACTGAAAAGCTA	3029	False	NA	NA	False	NA	NA	NA	100521472	100538247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100521575_100523066_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531783_100532982_100533164_100533987
ES.26439.14	chr5	+	2962	9	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGCACTGAAAAGCTA	3029	False	NA	NA	False	NA	NA	NA	100521472	100538247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100521575_100523066_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531783_100532982_100533164_100533987_100534063_100536389
ES.26439.15	chr5	+	6715	7	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGCACTGAAAAGCTA	3031	False	NA	NA	False	NA	NA	NA	100521474	100538247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100521575_100523066_100523190_100526685_100526863_100529020_100530769_100531656_100531783_100532982_100533164_100533987
ES.26439.16	chr5	+	2924	22	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCGCAGCCCCGCCTG	3035	False	NA	NA	False	NA	NA	NA	100521478	100564078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100521575_100523066_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531782_100532980_100533164_100533574_100533734_100533987_100534063_100536926_100536966_100538617_100538687_100540246_100540490_100540721_100540875_100541061_100541221_100543657_100543760_100547204_100547349_100550073_100550215_100551873_100551968_100553300_100553501_100555015_100555136_100555887_100555973_100563961
ES.26439.17	chr5	+	143	1	Intergenic	novelGene_21961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGACCCTCCATGA	NA	False	NA	NA	False	NA	NA	NA	100537918	100538061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100537900_100538100
ES.26439.18	chr5	+	175	1	Intergenic	novelGene_21962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGATACTAAAGT	NA	False	NA	NA	False	NA	NA	NA	100546221	100546396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100546200_100546400
ES.26439.19	chr5	+	1550	1	Intergenic	novelGene_21963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACTTAAAAAAAAAAAAAA	7231	False	NA	NA	False	NA	NA	NA	100560963	100562513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100561000_100562500
ES.26439.2	chr5	+	6068	1	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTACAGGAAACTATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	100506755	100512823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100506800_100512800
ES.26439.3	chr5	+	5470	2	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGAAGGAGGATTTCTA	NA	False	NA	NA	False	AGTAAA	-41	NA	100509756	100515271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100514606_100514650
ES.26439.4	chr5	+	3067	5	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAAACAGCACCCACTC	NA	False	NA	NA	False	AGTAAA	-33	NA	100509757	100518431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152
ES.26439.5	chr5	+	2138	5	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	100509757	100515248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100510090_100511235_100511308_100511686_100511807_100513589_100514606_100514650
ES.26439.6	chr5	+	6354	2	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	100509757	100518410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100513854_100516152
ES.26439.7	chr5	+	5514	1	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGAAGGAGGATTTCTA	NA	False	NA	NA	False	AGTAAA	-41	NA	100509757	100515271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100509800_100515300
ES.26439.8	chr5	+	3885	27	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCGCAGCCCCGCCTG	NA	False	NA	NA	False	NA	NA	NA	100509757	100564078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516210_100521281_100521575_100523066_100523190_100526685_100526863_100529020_100529192_100530619_100530769_100531656_100531783_100532982_100533164_100533987_100534063_100536389_100536470_100536925_100536966_100538617_100538687_100540247_100540490_100540722_100540875_100541061_100541221_100543657_100543759_100547204_100547349_100550073_100550215_100551873_100551968_100553300_100553498_100555011_100555136_100555887_100555973_100563961
ES.26439.9	chr5	+	5324	5	Antisense	novelGene_ENSMUSG00000035325.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAAACAGCACCCACTC	NA	False	NA	NA	False	AGTAAA	-33	NA	100509758	100518431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100510090_100511235_100511308_100511686_100511807_100513589_100514610_100514650
ES.2644.1	chr10	-	176	1	Intergenic	novelGene_2014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	40450580	40450404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40450400_40450600
ES.26440.1	chr5	-	4098	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-28	4	combination_of_known_junctions	TRUE	canonical	2	64	junction_13	204.849353428318	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTCTTTATTTATTTTT	8080	False	NA	-3	True	ATTAAA	-23	NA	100564121	100509503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.100	chr5	-	4142	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	262.985712933423	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTTATACAGTTAGTCT	8108	False	NA	-15	True	ATTAAA	-11	NA	100564093	100509515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.101	chr5	-	4043	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.828273922587	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTTATACAGTTAGTCT	8112	False	NA	-15	True	ATTAAA	-11	NA	100564089	100509515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521498_100521547_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.103	chr5	-	4913	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	-18	intron_retention	FALSE	canonical	2	466	junction_5	97.3852884166803	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGTGTAACCCCATC	8114	False	NA	12	True	AATAAA	-41	NA	100564087	100509530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555973_100563961
ES.26440.104	chr5	-	4271	7	NIC	ENSMUSG00000035325.17	novel	2846	19	NA	NA	1643	-38	intron_retention	FALSE	canonical	3	51	junction_6	316.414504864883	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTCCACATCAATCAGA	NA	False	NA	-8	True	AATAAA	-21	NA	100525129	100509550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100523191_100523819
ES.26440.107	chr5	-	4048	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	2	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	205.722634800198	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTCCACATCAATCAG	8110	False	NA	-9	True	AATAAA	-20	NA	100564091	100509551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521498_100521547_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.108	chr5	-	5541	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	12	-39	intron_retention	FALSE	canonical	1	4	junction_12	271.937288824564	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTCCACATCAATCAG	8188	False	NA	-9	True	AATAAA	-20	NA	100564013	100509551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530457_100530767_100531655_100533162_100533573_100533732_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.109	chr5	-	3960	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	186	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	230.7764518101	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTCTCCACATCAATCA	8362	False	NA	-10	True	AATAAA	-19	NA	100563839	100509552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521498_100521547_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100563761
ES.26440.11	chr5	-	4397	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_15	303.545430541076	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8109	False	NA	-7	True	ATTAAA	-19	NA	100564092	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.111	chr5	-	4315	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-11	-41	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_14	230.843344283521	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTCTCCACATCAATC	8097	False	NA	-11	True	AATAAA	-18	NA	100564104	100509553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.113	chr5	-	6976	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	-42	intron_retention	FALSE	canonical	2	51	junction_7	247.413661708484	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTTTCTCCACATCAAT	8108	False	NA	-12	True	AATAAA	-17	NA	100564093	100509554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.114	chr5	-	4097	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	15	-42	combination_of_known_junctions	FALSE	canonical	2	51	junction_7	274.054004957301	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTTTCTCCACATCAAT	8123	False	NA	-12	True	AATAAA	-17	NA	100564078	100509554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.115	chr5	-	3988	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-29	-42	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	182.008940439749	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTTTCTCCACATCAAT	8138	False	NA	-12	True	AATAAA	-17	NA	100564063	100509554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555892_100555973_100563961
ES.26440.117	chr5	-	6874	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-13	-44	intron_retention	TRUE	canonical	0	0	junction_6	232.664221572635	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTACTTTCTCCACATCA	8154	False	NA	-14	True	AATAAA	-15	NA	100564047	100509556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.118	chr5	-	4239	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	244.375618818045	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTACTTTCTCCACA	8112	False	NA	-17	True	AATAAA	-12	NA	100564089	100509559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521497_100521545_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.119	chr5	-	4051	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	-143	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTAATGTGGTTTT	8098	False	NA	-113	True	NA	NA	NA	100564103	100509655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.12	chr5	-	4375	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_26	202.258768579895	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8077	False	NA	-7	True	ATTAAA	-19	NA	100564124	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.120	chr5	-	3955	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	7	-144	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACTAATGTGGTTT	8115	False	NA	-114	True	NA	NA	NA	100564086	100509656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.121	chr5	-	3890	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-15	-1370	combination_of_known_splicesites	FALSE	canonical	2	51	junction_5	225.659935300886	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCCTTGTGGCGCTCC	8093	False	NA	NA	False	TTTAAA	-13	NA	100564108	100511439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.122	chr5	-	3761	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	-1385	combination_of_known_splicesites	FALSE	canonical	2	466	junction_3	104.10644092306	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTCTTTTTAAAGT	8114	False	NA	NA	False	NA	NA	NA	100564087	100511454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.123	chr5	-	4016	23	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-1871	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_22	189.132032241592	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAATAAATCTACTCTG	8112	False	NA	NA	False	AATAAA	-19	NA	100564089	100515483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.124	chr5	-	3802	23	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	14	-1875	combination_of_known_splicesites	FALSE	canonical	2	466	junction_1	107.617444974362	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAGAGAATAAATCTAC	8122	False	NA	NA	False	AATAAA	-15	NA	100564079	100515487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.125	chr5	-	4259	23	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	20	-6664	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_2	273.817038661141	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTGTCTTGGTTTATCT	8196	False	NA	NA	False	NA	NA	NA	100564005	100520276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.126	chr5	-	2852	22	ISM	ENSMUSG00000035325.17	ENSMUST00000094578.11	4228	28	7	11964	7	-7859	5prime_fragment	FALSE	canonical	2	555	junction_4	81.126367651613	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTACATATCTCCTGTGG	8115	False	NA	NA	False	NA	NA	NA	100564086	100521471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.13	chr5	-	4216	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	2	163	junction_5	145.633410441033	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8036	False	NA	-7	True	ATTAAA	-19	NA	100564165	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.14	chr5	-	4343	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_26	208.358422552391	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8098	False	NA	-7	True	ATTAAA	-19	NA	100564103	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563772
ES.26440.15	chr5	-	4206	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	257.343653175873	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8112	False	NA	-7	True	ATTAAA	-19	NA	100564089	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540803_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.17	chr5	-	4165	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8054	False	NA	-7	True	ATTAAA	-19	NA	100564147	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.18	chr5	-	4302	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	51	junction_7	217.697988658871	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8088	False	NA	-7	True	ATTAAA	-19	NA	100564113	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.19	chr5	-	4192	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	51	junction_7	256.815480118318	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8120	False	NA	-7	True	ATTAAA	-19	NA	100564081	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.2	chr5	-	4434	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_26	174.664111296935	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGTCTTTATTTATTTT	8066	False	NA	-4	True	ATTAAA	-22	NA	100564135	100509504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.21	chr5	-	4256	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	51	junction_7	238.444243093583	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8089	False	NA	-7	True	ATTAAA	-19	NA	100564112	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.22	chr5	-	4145	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_26	208.220908521604	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8098	False	NA	-7	True	ATTAAA	-19	NA	100564103	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563970
ES.26440.23	chr5	-	4643	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	1	0	intron_retention	FALSE	canonical	2	466	junction_5	102.563650481055	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8109	False	NA	-8	True	ATTAAA	-18	NA	100564092	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.25	chr5	-	4149	26	NIC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_14	262.330344413299	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8123	False	NA	-8	True	ATTAAA	-18	NA	100564078	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.26	chr5	-	4211	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_25	230.575225035128	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8196	False	NA	-8	True	ATTAAA	-18	NA	100564005	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563772
ES.26440.27	chr5	-	4337	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	229.900181118814	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8114	False	NA	-8	True	ATTAAA	-18	NA	100564087	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100557736_100557892_100563961
ES.26440.29	chr5	-	4337	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	226.451374395711	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8117	False	NA	-8	True	ATTAAA	-18	NA	100564084	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533573_100533732_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.30	chr5	-	6985	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-11	0	intron_retention	FALSE	canonical	2	466	junction_5	104.647523461698	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8097	False	NA	-8	True	ATTAAA	-18	NA	100564104	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.31	chr5	-	4265	28	FSM	ENSMUSG00000035325.17	ENSMUST00000094578.11	4228	28	-38	1	-38	0	multi-exon	FALSE	canonical	1	2	junction_6	223.785378761883	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8070	False	NA	-8	True	ATTAAA	-18	NA	100564131	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.32	chr5	-	3989	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	186.017848605987	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8133	False	NA	-8	True	ATTAAA	-18	NA	100564068	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.33	chr5	-	4187	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_26	181.643422232231	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8100	False	NA	-8	True	ATTAAA	-18	NA	100564101	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563970
ES.26440.34	chr5	-	4190	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_15	278.176195175163	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8115	False	NA	-8	True	ATTAAA	-18	NA	100564086	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.35	chr5	-	4238	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_15	261.386539586343	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8112	False	NA	-8	True	ATTAAA	-18	NA	100564089	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.36	chr5	-	4290	25	NNC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	48	junction_13	230.720155015888	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8089	False	NA	-8	True	ATTAAA	-18	NA	100564112	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.37	chr5	-	4176	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	232.311920491323	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8117	False	NA	-8	True	ATTAAA	-18	NA	100564084	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530616_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550208_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.4	chr5	-	4170	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_14	184.506416148599	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8088	False	NA	-7	True	ATTAAA	-19	NA	100564113	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.40	chr5	-	1615	9	NNC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	309.571377068359	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8140	False	NA	-8	True	ATTAAA	-18	NA	100564061	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523115_100555892_100555973_100563961
ES.26440.41	chr5	-	3139	7	ISM	ENSMUSG00000035325.17	ENSMUST00000182988.8	2846	19	18942	-358	1954	0	intron_retention	FALSE	canonical	3	163	junction_5	234.461084190959	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	NA	False	NA	-8	True	ATTAAA	-18	NA	100524818	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066
ES.26440.45	chr5	-	5840	5	ISM	ENSMUSG00000035325.17	ENSMUST00000182433.8	1195	7	388	0	388	0	intron_retention	FALSE	canonical	3	725	junction_4	39.1559382469633	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	NA	False	NA	-8	True	ATTAAA	-18	NA	100520955	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152
ES.26440.46	chr5	-	4284	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_25	246.439626683697	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	8089	False	NA	-8	True	ATTAAA	-18	NA	100564112	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.49	chr5	-	3394	1	NIC	ENSMUSG00000035325.17	novel	1686	6	NA	NA	-773	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	912	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	NA	False	NA	-8	True	ATTAAA	-18	NA	100512902	100509508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100509500_100512900
ES.26440.5	chr5	-	4286	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-97	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8011	False	NA	-7	True	ATTAAA	-19	NA	100564190	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.51	chr5	-	4037	25	NIC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	2	48	junction_13	210.643421548518	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8096	False	NA	-9	True	ATTAAA	-17	NA	100564105	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.52	chr5	-	4145	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	209.461640865536	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8098	False	NA	-9	True	ATTAAA	-17	NA	100564103	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555966_100563961
ES.26440.53	chr5	-	4066	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_25	230.44900867654	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8142	False	NA	-9	True	ATTAAA	-17	NA	100564059	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563970
ES.26440.54	chr5	-	4125	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_14	211.60132324728	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8086	False	NA	-9	True	ATTAAA	-17	NA	100564115	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.56	chr5	-	4133	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	231.868666274682	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8075	False	NA	-9	True	ATTAAA	-17	NA	100564126	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523182_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.57	chr5	-	4303	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_25	224.994378596444	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8114	False	NA	-9	True	ATTAAA	-17	NA	100564087	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.58	chr5	-	4115	26	NIC	ENSMUSG00000035325.17	novel	4047	26	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	2	48	junction_14	279.635745926732	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8111	False	NA	-9	True	ATTAAA	-17	NA	100564090	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.59	chr5	-	4150	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	182.720953219827	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8112	False	NA	-9	True	ATTAAA	-17	NA	100564089	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521567_100523091_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.6	chr5	-	3996	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	251.298120963926	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8133	False	NA	-7	True	ATTAAA	-19	NA	100564068	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540830_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.60	chr5	-	4706	13	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	3511	-1	intron_retention	FALSE	canonical	2	466	junction_3	126.197899040445	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	NA	False	NA	-9	True	ATTAAA	-17	NA	100536961	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926
ES.26440.61	chr5	-	4184	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	179.775030881363	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8058	False	NA	-9	True	ATTAAA	-17	NA	100564143	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521495_100521547_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.63	chr5	-	4763	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	4	junction_13	230.657960353759	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8146	False	NA	-9	True	ATTAAA	-17	NA	100564055	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533573_100533732_100533986_100534063_100536392_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.65	chr5	-	4372	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_7	270.049642339786	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8171	False	NA	-9	True	ATTAAA	-17	NA	100564030	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.67	chr5	-	4258	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	230.49115566439	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8112	False	NA	-9	True	ATTAAA	-17	NA	100564089	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100562441_100562517_100563961
ES.26440.68	chr5	-	4033	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	208.559386629994	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTAGTCTTTATTT	8177	False	NA	-9	True	ATTAAA	-17	NA	100564024	100509509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540835_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.69	chr5	-	4734	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	1	-2	intron_retention	FALSE	canonical	2	51	junction_7	221.773089563269	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8109	False	NA	-10	True	ATTAAA	-16	NA	100564092	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.7	chr5	-	4100	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_13	182.154238673347	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8080	False	NA	-7	True	ATTAAA	-19	NA	100564121	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.71	chr5	-	4406	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_7	285.669223623133	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8103	False	NA	-10	True	ATTAAA	-16	NA	100564098	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.72	chr5	-	4386	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_26	181.80350599727	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8097	False	NA	-10	True	ATTAAA	-16	NA	100564104	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563772
ES.26440.73	chr5	-	4076	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.775030881363	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8133	False	NA	-10	True	ATTAAA	-16	NA	100564068	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100509901_100509985_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.74	chr5	-	4372	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	227.107959235094	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8117	False	NA	-10	True	ATTAAA	-16	NA	100564084	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547352_100550081_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.75	chr5	-	4191	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	179.254063359159	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACAGTTAGTCTTTATT	8122	False	NA	-10	True	ATTAAA	-16	NA	100564079	100509510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555159_100555892_100555973_100563961
ES.26440.77	chr5	-	4015	25	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	252.390226413165	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	8159	False	NA	-12	True	ATTAAA	-14	NA	100564042	100509512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.78	chr5	-	4175	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	183.093329096839	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	8108	False	NA	-12	True	ATTAAA	-14	NA	100564093	100509512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511798_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.79	chr5	-	4310	29	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	283.061206603225	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	8114	False	NA	-12	True	ATTAAA	-14	NA	100564087	100509512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.8	chr5	-	3994	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	262.456170817148	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8123	False	NA	-7	True	ATTAAA	-19	NA	100564078	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.80	chr5	-	4303	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	262.272975837381	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATACAGTTAGTCTTTA	8135	False	NA	-12	True	ATTAAA	-14	NA	100564066	100509512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521498_100521547_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541220_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.81	chr5	-	4043	26	FSM	ENSMUSG00000035325.17	ENSMUST00000182886.8	4047	26	3	1	3	-1	multi-exon	FALSE	canonical	1	2	junction_6	268.762866482704	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8170	False	NA	-13	True	ATTAAA	-13	NA	100564031	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.82	chr5	-	3874	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	176.026288945714	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8081	False	NA	-13	True	ATTAAA	-13	NA	100564120	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.83	chr5	-	4177	29	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	254.258392894203	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8157	False	NA	-13	True	ATTAAA	-13	NA	100564044	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521498_100521547_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.84	chr5	-	4551	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-34	-1	intron_retention	FALSE	canonical	2	163	junction_4	148.27522517265	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8074	False	NA	-13	True	ATTAAA	-13	NA	100564127	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.86	chr5	-	4247	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	287.334034936929	921	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8115	False	NA	-13	True	ATTAAA	-13	NA	100564086	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100557736_100557892_100563961
ES.26440.89	chr5	-	6898	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	26	-1	intron_retention	FALSE	canonical	2	163	junction_5	151.553706789595	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8134	False	NA	-13	True	ATTAAA	-13	NA	100564067	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.9	chr5	-	4114	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	261.741369253502	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8176	False	NA	-7	True	ATTAAA	-19	NA	100564025	100509507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.92	chr5	-	4173	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	183.086408933309	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8152	False	NA	-13	True	ATTAAA	-13	NA	100564049	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563927
ES.26440.94	chr5	-	4100	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	269.356489877362	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATACAGTTAGTCTTT	8110	False	NA	-13	True	ATTAAA	-13	NA	100564091	100509513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100510090_100511235_100511308_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26440.95	chr5	-	4485	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_7	253.145940005	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATACAGTTAGTCTT	8098	False	NA	-14	True	ATTAAA	-12	NA	100564103	100509514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
ES.26440.96	chr5	-	4033	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	255.567134037223	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATACAGTTAGTCTT	8170	False	NA	-14	True	ATTAAA	-12	NA	100564031	100509514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529186_100530616_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ES.26441.1	chr5	+	225	1	Intergenic	novelGene_21964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	100593593	100593818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100593600_100593800
ES.26442.1	chr5	+	3795	2	Antisense	novelGene_ENSMUSG00000118665.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAACACAAGTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	100600499	100605141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100600948_100601794
ES.26443.1	chr5	+	2258	2	Antisense	novelGene_ENSMUSG00000118665.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGATTAGTAAATTAATC	NA	False	NA	NA	False	NA	NA	NA	100620910	100623397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_100621311_100621539
ES.26444.1	chr5	+	177	1	Intergenic	novelGene_21966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATTGAAAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	100624502	100624679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100624500_100624700
ES.26445.1	chr5	+	176	1	Intergenic	novelGene_21968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	100640750	100640926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100640800_100640900
ES.26446.1	chr5	-	4964	1	Genic_Genomic	ENSMUSG00000097772.8	novel	NA	NA	NA	NA	5928	2358	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTAAAAGACTTGTGAAT	895	False	NA	NA	False	AATAAA	-12	NA	100571306	100566342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_100566300_100571300
ES.26446.10	chr5	-	3977	2	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	360	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTAGAATGTTGTG	NA	False	NA	-9	True	AATAAA	-29	NA	100577373	100568702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100569901_100574594
ES.26446.11	chr5	-	2732	17	Fusion	ENSMUSG00000097772.8_ENSMUSG00000118665.1	novel	626	5	NA	NA	-5	-2	multi-exon	FALSE	canonical	0	0	junction_4	110.339373497179	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTAGAATGTTGTG	NA	False	NA	-9	True	AATAAA	-29	NA	100648498	100568702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.12	chr5	-	4332	4	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	174.017240525185	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTAGAATGTTGTG	NA	False	NA	-9	True	AATAAA	-29	NA	100577372	100568702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100568832_100569826_100571291_100574594_100575379_100575417
ES.26446.13	chr5	-	5401	3	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	-17	-23	intron_retention	FALSE	canonical	3	348	junction_2	13.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAAAATAGTAAAA	NA	False	NA	-6	True	AATAAA	-8	NA	100577411	100568723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100568832_100569826_100574664_100576955
ES.26446.14	chr5	-	2922	4	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	-27	-23	intron_retention	FALSE	canonical	3	343	junction_3	13.0724477007517	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAAAATAGTAAAA	NA	False	NA	-6	True	AATAAA	-8	NA	100577421	100568723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100568832_100569826_100569901_100574594_100577098_100577184
ES.26446.15	chr5	-	1981	3	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	1797	-23	intron_retention	FALSE	non_canonical	0	0	junction_2	180	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAAAATAGTAAAA	NA	False	NA	-6	True	AATAAA	-8	NA	100575437	100568723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100569901_100574594_100575379_100575417
ES.26446.16	chr5	-	604	6	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	8	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.525624907767	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAAAATAGTAAAA	NA	False	NA	-6	True	AATAAA	-8	NA	100577226	100568723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100568832_100569826_100569901_100571121_100571291_100574594_100574664_100576955_100577098_100577184
ES.26446.17	chr5	-	5111	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239513.1	4587	13	-74	-450	-69	449	multi-exon	FALSE	canonical	1	7	junction_12	54.8246573683371	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTGCTGTGTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	100646506	100589450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100646161
ES.26446.18	chr5	-	4615	11	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-6	449	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	62.1269667696726	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTGCTGTGTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	100648499	100589450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.19	chr5	-	4232	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	2	449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.7888095362223	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTGCTGTGTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	100648491	100589450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601994_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.2	chr5	-	970	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	-23	-321	-23	321	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTGGTAAAGATTTAT	NA	False	NA	0	True	ATTAAA	-18	NA	100577417	100568379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ES.26446.20	chr5	-	4869	14	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-4375	448	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.4416108479686	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTTTTGCTGTGTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	100652868	100589451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100649598_100649647_100652812
ES.26446.21	chr5	-	4910	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-12	-447	-12	447	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTTTTGCTGTGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	100648505	100589452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.23	chr5	-	5000	14	NIC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	-5	445	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	70.4163442565825	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCATTTTTGCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	100648498	100589454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.24	chr5	-	3822	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-25	9	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCATTTTTTCTTTAGT	NA	False	NA	NA	False	AATAAA	-43	NA	100648518	100589890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.25	chr5	-	4506	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-47	-8	-47	8	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648540	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.26	chr5	-	4406	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-48	8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	55.1640860423599	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648541	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594483_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.27	chr5	-	4388	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.0085276272087	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648496	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601872_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.28	chr5	-	4602	14	NIC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	-44	8	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	70.4163442565825	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648537	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.29	chr5	-	3895	14	NIC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	0	8	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	79.3494257127721	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648493	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.30	chr5	-	3809	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.3532258598629	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648497	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598755_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.32	chr5	-	3741	12	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-19	8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	73.5198854305351	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648512	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.33	chr5	-	4472	13	Fusion	ENSMUSG00000118665.1_ENSMUSG00002076564.1	novel	3865	14	NA	NA	19	8	multi-exon	FALSE	canonical	0	0	junction_12	70.1749302339043	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648474	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100647664
ES.26446.34	chr5	-	3748	12	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-5	8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	58.1275314920165	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648498	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100648359
ES.26446.35	chr5	-	4410	12	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-25	8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	59.023878064883	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648518	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.36	chr5	-	4208	11	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-16	8	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	60.0224124806726	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648509	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100632998_100633715_100648359
ES.26446.37	chr5	-	4365	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	56.8914658704527	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648498	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607563_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.38	chr5	-	3479	10	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-3	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	64.3307426075935	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648496	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100648359
ES.26446.39	chr5	-	5159	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	56.6676470503428	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCATTTTTTCTTTAG	NA	False	NA	NA	False	AATAAA	-42	NA	100648498	100589891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100647664
ES.26446.4	chr5	-	2491	1	Genic_Genomic	ENSMUSG00000097772.8	novel	NA	NA	NA	NA	6360	317	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTTTTTGGTAAAGAT	1327	False	NA	-4	True	ATTAAA	-14	NA	100570874	100568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_100568400_100570900
ES.26446.40	chr5	-	4640	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239513.1	4587	13	-46	-7	-41	6	multi-exon	FALSE	canonical	1	7	junction_12	54.8246573683371	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGCATTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-40	NA	100646478	100589893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100646161
ES.26446.42	chr5	-	4570	13	NNC	ENSMUSG00000118665.1	novel	4587	13	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.5371552301914	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100646478	100589899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592073_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100646161
ES.26446.43	chr5	-	4541	14	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	72.4234752225659	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100648507	100589899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100628337_100628414_100632998_100633715_100648359
ES.26446.46	chr5	-	4275	12	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	12754	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.8947794063473	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	9554	False	NA	NA	False	AATAAA	-34	NA	100633678	100589899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600946_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998
ES.26446.47	chr5	-	4009	14	NNC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	83.3386191617487	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	100648477	100589900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100633522_100633715_100648359
ES.26446.48	chr5	-	3814	13	NIC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	84.7998869889184	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	100648474	100589900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100648359
ES.26446.49	chr5	-	3665	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	68.8994839522684	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	100648472	100589900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594483_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.5	chr5	-	3147	5	NNC	ENSMUSG00000097772.8	novel	626	5	NA	NA	29	317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	156.007211371782	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTTTTTGGTAAAGAT	NA	False	NA	-4	True	ATTAAA	-14	NA	100577345	100568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100568832_100569826_100569901_100574594_100575379_100575417_100577098_100577184
ES.26446.50	chr5	-	3990	15	NNC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.5604137464567	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	100648504	100589900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100596894_100596988_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.51	chr5	-	4323	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-29	157	-29	2	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGAGGGTTTGGTCTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	100648522	100590056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.52	chr5	-	4015	11	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	62.1269667696726	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGGGAGGGTTTGGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	100648508	100590059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.53	chr5	-	4714	14	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.9880825114035	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGGGGAGGGTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	100648478	100590062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100593297_100593608_100594251_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.54	chr5	-	4391	14	NIC	ENSMUSG00000118665.1	novel	3865	14	NA	NA	-8	-8	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	70.4163442565825	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTATTTGGGGAGGG	NA	False	NA	NA	False	ATTAAA	-12	NA	100648501	100590066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.55	chr5	-	4168	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-25	308	-25	-149	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACGAGTTTGGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	100648518	100590207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.56	chr5	-	3482	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-5	-152	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTACGAGTTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	100648498	100590210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
ES.26446.57	chr5	-	3263	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-25	1213	-25	-1054	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAGTAAGTCTGAAGTCT	NA	False	NA	NA	False	ATTAAA	-29	NA	100648518	100591112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.58	chr5	-	3094	12	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-12	-1067	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	59.0808383026634	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGAACTCATACGCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	100648505	100591125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100628056_100628181_100632998_100633715_100648359
ES.26446.59	chr5	-	2912	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-4	1543	-4	-1384	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAGATTT	NA	False	NA	NA	False	AATATA	-37	NA	100648497	100591442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.6	chr5	-	655	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	-22	-7	-22	7	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTGTGTTTTATTGA	NA	False	NA	0	True	AATAAA	-38	NA	100577416	100568693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ES.26446.60	chr5	-	2060	13	NNC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	-1	-1558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	56.9509413637933	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATAATGTATGGTGTT	NA	False	NA	NA	False	CATAAA	-13	NA	100648494	100591616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633673_100633715_100648359
ES.26446.61	chr5	-	2555	12	ISM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-3	4145	-3	-3986	5prime_fragment	FALSE	canonical	3	163	junction_10	16.8944217895525	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGCTACAAATATAAAG	NA	False	NA	NA	False	NA	NA	NA	100648496	100594044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ES.26446.62	chr5	-	4553	1	Intergenic	novelGene_21965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCCCACAGTAAATTC	NA	False	NA	NA	False	NA	NA	NA	100615175	100610622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100610600_100615200
ES.26446.63	chr5	-	1257	3	ISM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	-6	37880	-6	4420	5prime_fragment	FALSE	canonical	3	163	junction_1	22.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTATAGCTTATTTGT	NA	False	NA	NA	False	NA	NA	NA	100648499	100627779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100628181_100632998_100633715_100648359
ES.26446.64	chr5	-	5763	1	Intergenic	novelGene_21967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAATTGCAATTATTAC	1741	False	NA	NA	False	NA	NA	NA	100641491	100635728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100635700_100641500
ES.26446.7	chr5	-	7681	2	ISM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	21	-3	1	3	intron_retention	FALSE	canonical	3	375	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-34	NA	100577373	100568697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100568832_100569826
ES.26446.8	chr5	-	5303	4	NIC	ENSMUSG00000097772.8	novel	626	5	NA	NA	0	3	intron_retention	FALSE	canonical	3	343	junction_3	14.0554457615387	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-34	NA	100577374	100568697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100568832_100569826_100574664_100576955_100577098_100577184
ES.26446.9	chr5	-	6297	3	FSM	ENSMUSG00000097772.8	ENSMUST00000180779.2	3486	3	2	-2813	1	3	multi-exon	FALSE	canonical	3	343	junction_2	2.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAATGTTGTGTTTTA	NA	False	NA	-4	True	AATAAA	-34	NA	100577373	100568697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100574664_100576955_100577098_100577184
ES.26447.1	chr5	+	1574	10	NNC	ENSMUSG00000035297.15	novel	872	8	NA	NA	-937	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	434.511731078051	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGGTGTTCTATTCCT	4336	False	NA	40	True	AATAAA	-42	NA	100665237	100695666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100665302_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.10	chr5	+	4712	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	1193	junction_8	108.256350852964	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGTGAGGTGTTCTAT	5400	False	NA	36	True	AATAAA	-38	NA	100666301	100695662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.13	chr5	+	1586	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	435.871484060708	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAAAGGCAGTACTTGG	5404	False	NA	12	True	AATAAA	-14	NA	100666305	100695638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689409_100689519_100691704_100691790_100695169
ES.26447.14	chr5	+	8439	7	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1193	junction_6	59.1929519077699	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5408	False	NA	20	True	AATAAA	-22	NA	100666309	100695646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.17	chr5	+	10120	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	434.511731078051	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGCAGTACTTGGT	5422	False	NA	13	True	AATAAA	-15	NA	100666323	100695639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100670052_100670930_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.18	chr5	+	1689	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	434.511731078051	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	5423	False	NA	37	True	AATAAA	-39	NA	100666324	100695663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100666507_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.2	chr5	+	1739	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	14	2	14	-2	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTGTTCTATTCCTT	5287	False	NA	41	True	AATAAA	-43	NA	100666188	100695667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.20	chr5	+	1491	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	442.714284273729	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGCAGTACTTGGT	5427	False	NA	13	True	AATAAA	-15	NA	100666328	100695639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100666417_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.22	chr5	+	9013	3	NNC	ENSMUSG00000035297.15	novel	2389	4	NA	NA	-5	1871	intron_retention	TRUE	non_canonical	0	0	junction_2	685	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGATGTACAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	100676500	100687205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100676557_100677912_100686253_100686588
ES.26447.23	chr5	+	3664	2	NNC	ENSMUSG00000035297.15	novel	826	6	NA	NA	3099	1871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGATGTACAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	100683206	100687205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100686223_100686557
ES.26447.24	chr5	+	2213	2	NNC	ENSMUSG00000035297.15	novel	826	6	NA	NA	4550	1871	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGATGTACAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	100684657	100687205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100686287_100686621
ES.26447.25	chr5	+	720	2	ISM	ENSMUSG00000035297.15	ENSMUST00000123559.2	2154	6	11432	7	11432	-7	3prime_fragment	FALSE	canonical	3	1193	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGCAGTACTTGGT	NA	False	NA	13	True	AATAAA	-15	NA	100691539	100695639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100691790_100695169
ES.26447.3	chr5	+	1532	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-26	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	455.54773007337	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGCAGTACTTGGT	5381	False	NA	13	True	AATAAA	-15	NA	100666282	100695639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100695169
ES.26447.4	chr5	+	1524	9	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	578.158499029462	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	5389	False	NA	37	True	AATAAA	-39	NA	100666290	100695663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100666417_100676404_100676557_100677912_100677988_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.5	chr5	+	2443	8	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-18	1840	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	493.195908419395	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	5389	False	NA	NA	False	NA	NA	NA	100666290	100687174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100686223_100686557
ES.26447.6	chr5	+	1436	8	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	487.320872375749	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTGTTCTATTCCTT	5389	False	NA	41	True	AATAAA	-43	NA	100666290	100695667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100695169
ES.26447.7	chr5	+	1589	10	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_4	425.605451092911	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	5400	False	NA	37	True	AATAAA	-39	NA	100666301	100695663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100677988_100681111_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ES.26447.9	chr5	+	4985	9	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	127	23	-7	0	intron_retention	FALSE	canonical	3	1210	junction_7	97.4265749167033	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTACTTGGTTTTTAAT	5400	False	NA	20	True	AATAAA	-22	NA	100666301	100695646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704
ES.26448.1	chr5	-	152	1	Intergenic	novelGene_21969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	100682279	100682127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100682100_100682300
ES.26449.1	chr5	+	181	1	Intergenic	novelGene_21970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTCACATACAT	NA	False	NA	NA	False	NA	NA	NA	100702667	100702848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100702700_100702800
ES.2645.1	chr10	-	169	1	Intergenic	novelGene_2015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	40458858	40458689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40458700_40458900
ES.26450.1	chr5	+	235	1	Intergenic	novelGene_21971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAAGAGGAACCT	NA	False	NA	NA	False	NA	NA	NA	100733390	100733625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100733400_100733600
ES.26451.1	chr5	-	135	1	Intergenic	novelGene_21972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	100737397	100737262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100737300_100737400
ES.26452.1	chr5	-	176	1	Intergenic	novelGene_21973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACATATTAATCACA	NA	False	NA	NA	False	NA	NA	NA	100740089	100739913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100739900_100740100
ES.26453.1	chr5	-	8067	5	ISM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	3797	-1	3669	1	intron_retention	FALSE	canonical	3	317	junction_3	17.5979402203781	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCGACTCTTCATTACAGC	2599	False	NA	0	True	AATAAA	-21	NA	100818353	100802587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445
ES.26453.10	chr5	-	1539	6	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	151.381108464696	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822101	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809802_100811445_100811568_100821854
ES.26453.11	chr5	-	1341	4	NIC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	167.763722737267	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822124	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100821854
ES.26453.13	chr5	-	1735	6	NNC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	129.460418661458	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822111	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811767_100821854
ES.26453.14	chr5	-	1250	4	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	154.99749101912	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822121	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805749_100815754_100815925_100821854
ES.26453.15	chr5	-	3583	6	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	133.745130752488	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822091	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100813735_100815925_100821854
ES.26453.16	chr5	-	1481	5	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	146.121524766203	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACGCGACTCTTCATTAC	NA	False	NA	-3	True	AATAAA	-18	NA	100822088	100802590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808093_100815668_100815925_100821854
ES.26453.17	chr5	-	1651	7	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	160.803192339787	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACGCGACTCTTCATTA	NA	False	NA	-4	True	AATAAA	-17	NA	100822132	100802591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100812640_100812737_100821854
ES.26453.18	chr5	-	1377	5	NNC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.360302624225	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGACGCGACTCTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	100822082	100802592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100821854
ES.26453.19	chr5	-	1316	4	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	156.794982912932	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGACGCGACTCTTCAT	NA	False	NA	-6	True	AATAAA	-15	NA	100822115	100802593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100805873_100811445_100811568_100821854
ES.26453.2	chr5	-	1547	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822122	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
ES.26453.20	chr5	-	1318	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	26	399	-9	133	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGGCTTAAGACTACA	NA	False	NA	NA	False	AATAAA	-15	NA	100822124	100802987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ES.26453.21	chr5	-	2906	2	ISM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	26	10700	-9	-3557	5prime_fragment	FALSE	canonical	3	273	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGAATGTTGTAGTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	100822124	100813288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100815925_100821854
ES.26453.22	chr5	-	2553	2	ISM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	37	11042	2	-3899	5prime_fragment	FALSE	canonical	3	273	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTATCTCAACAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	100822113	100813630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100815925_100821854
ES.26453.3	chr5	-	1724	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	18	1	-17	-1	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822132	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ES.26453.4	chr5	-	1999	8	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	149.964621678255	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822115	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100813735_100814028_100815757_100815925_100821854
ES.26453.5	chr5	-	6730	4	NIC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	-3202	-1	intron_retention	FALSE	canonical	3	333	junction_3	13.1402688962847	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	5465	False	NA	-2	True	AATAAA	-19	NA	100815487	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100805873_100808037_100809789_100811445
ES.26453.6	chr5	-	5389	5	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	14	-1	intron_retention	FALSE	canonical	3	222	junction_3	55.0335125173744	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822101	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100809789_100811445_100811568_100815757_100815925_100821854
ES.26453.7	chr5	-	1821	7	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	125.070202508653	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822102	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811695_100815757_100815925_100821854
ES.26453.9	chr5	-	1626	6	NNC	ENSMUSG00000029319.9	novel	1043	6	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_5	155.37618865193	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGCGACTCTTCATTACA	NA	False	NA	-2	True	AATAAA	-19	NA	100822079	100802589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100811445_100811695_100821854
ES.26454.1	chr5	+	124	1	Intergenic	novelGene_21974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	100831119	100831243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100831100_100831200
ES.26455.1	chr5	-	3343	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	-226	0	-226	0	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGGTCATTCTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	100867808	100827349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
ES.26455.2	chr5	-	1754	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	5	1358	5	-1358	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCGAGGGGGGTGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	100867577	100828707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
ES.26456.1	chr5	+	957	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	-311	-8	-311	8	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTCTTTCAGTGGATT	NA	False	NA	59	True	AATAAA	-41	NA	100946181	100952345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ES.26456.2	chr5	+	471	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	-7	-4	-7	-3	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATTTGAGTGGAAATG	NA	False	NA	45	True	AATAAA	-27	NA	100946595	100952331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ES.26456.4	chr5	+	3889	2	FSM	ENSMUSG00000016833.15	ENSMUST00000140296.2	256	2	-2	-3631	-2	-1141	multi-exon	FALSE	canonical	3	1980	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100946606	100951186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100946727_100947417
ES.26456.5	chr5	+	456	5	FSM	ENSMUSG00000016833.15	ENSMUST00000198453.2	457	5	2	-1	2	0	multi-exon	FALSE	canonical	3	38	junction_1	769.215631341433	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGTGGAAATGTCTT	NA	False	NA	49	True	AATAAA	-31	NA	100946610	100952335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100946727_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ES.26456.6	chr5	+	457	6	NNC	ENSMUSG00000016833.15	novel	638	6	NA	NA	2	-32	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	731.986447961982	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAATAAACCTCTAAGTG	NA	False	NA	9	True	AATAAA	-21	NA	100946610	100952295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100946727_100947417_100947459_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ES.26456.7	chr5	+	4573	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	-4	-2272	-4	2272	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100946610	100951183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100946600_100951200
ES.26456.8	chr5	+	1581	3	ISM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	16	1143	6	-1143	5prime_fragment	FALSE	canonical	3	1751	junction_2	114.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	100946618	100951184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100946727_100947417_100947480_100949773
ES.26456.9	chr5	+	179	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	2095	23	2095	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGGATTGT	NA	False	NA	NA	False	NA	NA	NA	100948709	100948888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100948700_100948900
ES.26457.1	chr5	+	139	1	Intergenic	novelGene_21977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	100961392	100961531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100961400_100961500
ES.26458.1	chr5	-	4056	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	16	-383	-5	383	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTATCTCTGTGAAGT	NA	False	NA	NA	False	AATATA	-24	NA	100946448	100909627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.10	chr5	-	4124	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.1269709380104	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946461	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916566_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.11	chr5	-	4084	6	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-1263	-1	intron_retention	FALSE	canonical	3	54	junction_3	14.3471251475688	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100923249	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100916322_100918263_100918363_100919599_100919758_100921810
ES.26458.12	chr5	-	3761	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.2640906227701	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946456	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.13	chr5	-	3885	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	19.7491185033889	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.14	chr5	-	3938	11	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2379	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.3168098078556	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100933245	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100933032_100933147
ES.26458.15	chr5	-	7100	16	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	15	junction_10	16.6845237670523	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946447	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.16	chr5	-	3723	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	21.8980019944624	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946443	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916511_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.17	chr5	-	4427	6	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-1144	-1	intron_retention	FALSE	canonical	3	54	junction_4	13.614697940094	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100923130	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100918363_100919599_100919758_100921810
ES.26458.19	chr5	-	3511	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.776330821156	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944265_100944929_100946159
ES.26458.2	chr5	-	3878	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	16.6184539106568	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCTGGGTGATTAAGTC	NA	False	NA	3	True	ATTAAA	-24	NA	100946467	100910012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.20	chr5	-	676	3	NNC	ENSMUSG00000035266.17	novel	442	3	NA	NA	555	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	45	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	2422	False	NA	-2	True	ATTAAA	-19	NA	100914124	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914068
ES.26458.21	chr5	-	3656	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.6161369148709	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946456	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931046_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.22	chr5	-	3505	17	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_15	17.3258071601297	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100944219_100944929_100946159
ES.26458.23	chr5	-	3527	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	18.4223799506194	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946436	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.24	chr5	-	3458	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	23.3505052140205	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.25	chr5	-	3728	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	21.7848873047095	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946449	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.26	chr5	-	3869	19	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.6802908098593	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100916453_100916511_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946031
ES.26458.28	chr5	-	3337	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.228202291007	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946466	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944265_100944929_100946159
ES.26458.29	chr5	-	3622	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.6161369148709	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946456	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933199_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.3	chr5	-	3706	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	-20	3	-20	3	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCTCTGGGTGATTAAGT	NA	False	NA	2	True	ATTAAA	-23	NA	100946484	100910013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.30	chr5	-	3614	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.9807663484488	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946442	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944265_100944929_100946159
ES.26458.31	chr5	-	3680	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.6232734147824	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	False	NA	-2	True	ATTAAA	-19	NA	100946448	100910017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.32	chr5	-	9788	13	NIC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	2	6	junction_11	23.3398800339676	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGGCGCTCTGGGTGAT	NA	False	NA	-3	True	ATTAAA	-18	NA	100946466	100910018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100944219_100944929_100946159
ES.26458.33	chr5	-	3374	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.6743761221459	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGCGCTCTGGGTGA	NA	False	NA	-4	True	ATTAAA	-17	NA	100946450	100910019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914552_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100944219_100944929_100946159
ES.26458.34	chr5	-	4506	16	ISM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	3854	71	-1692	-65	3prime_fragment	FALSE	canonical	3	51	junction_12	10.2921761007519	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCCCCGTGTAAATGA	NA	False	NA	-66	True	NA	NA	NA	100942610	100910081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529
ES.26458.35	chr5	-	2982	15	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-10	-1689	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	15.921362878798	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTCGTTTGTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	100946453	100916291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100916511_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.36	chr5	-	6392	12	NIC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	-3	25	intron_retention	FALSE	canonical	3	15	junction_7	15.249983064616	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTCAGGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	100946446	100919388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100944929_100946159
ES.26458.37	chr5	-	2745	13	NNC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	-2	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.028487415802	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	100946466	100919404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.38	chr5	-	2601	11	NNC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.6196951716147	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTCTGAATCTGGGT	NA	False	NA	NA	False	NA	NA	NA	100946461	100926257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944265_100944929_100946159
ES.26458.39	chr5	-	2372	10	NNC	ENSMUSG00000035266.17	novel	1628	8	NA	NA	-3	828	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.1700930443438	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	100946467	100930136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100930456_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.4	chr5	-	7214	17	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_12	15.3641984415068	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946471	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100944929_100946159
ES.26458.40	chr5	-	2397	7	NNC	ENSMUSG00000035266.17	novel	792	7	NA	NA	-149	828	intron_retention	FALSE	non_canonical	0	0	junction_2	34.1076726460973	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	100941067	100930136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100930456_100930823_100931046_100933143_100933294_100934849_100934949_100937993_100938103_100939202_100939276_100939642
ES.26458.41	chr5	-	6538	5	NIC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	7	-2346	intron_retention	FALSE	canonical	3	40	junction_3	13.1029576813787	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100946457	100933391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100938103_100939202_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.43	chr5	-	5048	1	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	2153	-2346	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100938439	100933391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100933400_100938400
ES.26458.44	chr5	-	3124	7	ISM	ENSMUSG00000035266.17	ENSMUST00000133845.8	2969	16	-132	23079	-2	-2346	5prime_fragment	FALSE	canonical	3	40	junction_5	11.295279249905	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100946466	100933391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.45	chr5	-	2936	6	NIC	ENSMUSG00000035266.17	novel	1628	8	NA	NA	-5	-2350	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	28.2517256110136	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100946448	100933395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100944219_100944929_100946159
ES.26458.46	chr5	-	3114	7	NIC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	-8	-2375	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.9394918022836	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100946472	100933420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.47	chr5	-	3276	7	NNC	ENSMUSG00000035266.17	novel	2969	16	NA	NA	-10	-2382	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	26.1979642975047	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100946453	100933427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.48	chr5	-	164	1	Intergenic	novelGene_21975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100938634	100938470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100938500_100938600
ES.26458.49	chr5	-	4350	2	NNC	ENSMUSG00000035266.17	novel	1628	8	NA	NA	-10	-1363	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGTTTATTTATTTG	NA	False	NA	NA	False	AAAAAG	-16	NA	100946453	100941000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100944929_100946031
ES.26458.5	chr5	-	3687	18	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	15.7835708021485	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946455	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.50	chr5	-	3297	2	ISM	ENSMUSG00000035266.17	ENSMUST00000151201.2	1628	8	1	10869	1	-2277	5prime_fragment	FALSE	canonical	3	68	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGGTGAGTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	100946442	100941914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100944929_100946159
ES.26458.51	chr5	-	1116	2	ISM	ENSMUSG00000035266.17	ENSMUST00000151201.2	1628	8	-24	13075	-3	-4483	5prime_fragment	FALSE	canonical	3	68	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTCGAATGAGCAAGAG	NA	False	NA	NA	False	ATTAAA	-40	NA	100946467	100944120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100944929_100946159
ES.26458.6	chr5	-	3553	17	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	18.5737550053833	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946448	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.7	chr5	-	3494	17	NIC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.1383735920793	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946449	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100910503_100912806_100912942_100914553_100914668_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ES.26458.8	chr5	-	3732	18	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.2142594416056	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946442	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914665_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944031_100944929_100946159
ES.26458.9	chr5	-	7214	17	NNC	ENSMUSG00000035266.17	novel	3689	18	NA	NA	34	0	intron_retention	FALSE	canonical	1	1	junction_7	24.4360613387264	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	NA	False	NA	-1	True	ATTAAA	-20	NA	100946409	100910016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916511_100918263_100918363_100919599_100919758_100921810_100921904_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100937991_100938103_100939202_100939276_100939642_100939844_100940529_100944929_100946159
ES.26459.1	chr5	-	4830	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	5	-2696	5	2696	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTATTACTTTGTTTG	NA	False	NA	NA	False	AAAACA	-33	NA	100968826	100950361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.11	chr5	-	2342	11	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_6	83.5325684987598	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTGTAATATCTTA	NA	False	NA	-8	True	AATAAA	-14	NA	100968814	100953062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100964049_100964118_100964803_100964961_100965827_100965865_100966382_100966474_100968696
ES.26459.12	chr5	-	1649	10	NNC	ENSMUSG00000035234.19	novel	1668	10	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	57.5019054971439	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTGTAATATCTTA	NA	False	NA	-8	True	AATAAA	-14	NA	100968809	100953062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
ES.26459.13	chr5	-	2133	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	25	junction_1	53.6860084193265	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTTTGTAATATCTTA	NA	False	NA	-8	True	AATAAA	-14	NA	100968819	100953062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954633_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.14	chr5	-	7803	7	NIC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	145	junction_2	25.0759956044731	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	False	NA	-14	True	AATAAA	-8	NA	100968814	100953068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100965865_100966382_100966474_100968696
ES.26459.15	chr5	-	2047	8	NNC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_6	83.7764274478112	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	False	NA	-14	True	AATAAA	-8	NA	100968799	100953068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100966382_100966474_100968696
ES.26459.16	chr5	-	1472	9	NIC	ENSMUSG00000035234.19	novel	1657	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	65.4384252561139	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	False	NA	-14	True	AATAAA	-8	NA	100968815	100953068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.17	chr5	-	1559	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	2	-530	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	74.2351626589448	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGTTTGGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	100968804	100953598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
ES.26459.18	chr5	-	1584	9	NIC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	1	-530	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	59.6226414627866	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGTTTGGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	100968812	100953598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.19	chr5	-	1598	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-7	-530	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	53.6860084193265	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGTTTGGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	100968820	100953598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954633_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.2	chr5	-	4356	8	NIC	ENSMUSG00000035234.19	novel	2182	10	NA	NA	0	2301	intron_retention	FALSE	canonical	1	4	junction_5	82.245277762834	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGCCATCTTTTAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	100968809	100950756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100954356_100954644_100954757_100957419_100957510_100957621_100957742_100959874_100960069_100965827_100965865_100966382_100966474_100968696
ES.26459.21	chr5	-	1455	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-7	461	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	53.6860084193265	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAATTCTTACTTATAT	NA	False	NA	NA	False	AATATA	-26	NA	100968820	100953741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954633_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.22	chr5	-	1412	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-1	452	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	55.1507876190359	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACAGTATCTTAATTCT	NA	False	NA	NA	False	AATATA	-17	NA	100968814	100953750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
ES.26459.23	chr5	-	1369	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	1	769	1	376	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTATTCACCTGTTTGT	NA	False	NA	NA	False	AATACA	-17	NA	100968830	100953826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.24	chr5	-	378	1	Intergenic	novelGene_21976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	100961687	100961309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100961300_100961700
ES.26459.25	chr5	-	4043	3	FSM	ENSMUSG00000105607.2_ENSMUSG00000035234.19	ENSMUST00000145707.2	454	3	-18	-3571	0	28	multi-exon	FALSE	canonical	3	160	junction_1	27	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGGCTGTGGACGTGG	NA	False	NA	NA	False	NA	NA	NA	100968831	100962047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100965865_100966382_100966474_100968696
ES.26459.26	chr5	-	1241	4	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-1	3542	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	79.9388655299925	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100968808	100962076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100963078_100965827_100965865_100966382_100966474_100968696
ES.26459.27	chr5	-	1256	4	ISM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	0	9008	0	3542	5prime_fragment	FALSE	canonical	3	152	junction_1	27.5358352374178	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100968806	100962076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.28	chr5	-	387	2	FSM	ENSMUSG00000035234.19	ENSMUST00000131857.2	358	2	-6	-23	1	23	multi-exon	FALSE	canonical	3	214	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACCAAAAGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	100968812	100966202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100966474_100968696
ES.26459.29	chr5	-	2593	1	FSM	ENSMUSG00000105755.2	ENSMUST00000198852.2	424	1	-202	-1967	-202	1967	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TTTAAA	-40	NA	100968821	100966228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100966200_100968800
ES.26459.3	chr5	-	4362	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	17	-2240	-1	2240	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAACATTTAGTATGT	NA	False	NA	NA	False	AATAAA	-32	NA	100968814	100950817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.4	chr5	-	4361	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	-8	2221	intron_retention	FALSE	canonical	3	25	junction_1	53.6860084193265	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTACCTTCAAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	100968821	100950836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954633_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.5	chr5	-	3346	9	NNC	ENSMUSG00000035234.19	novel	2139	9	NA	NA	3	1252	intron_retention	TRUE	canonical	3	24	junction_6	55.1507876190359	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAATGTTATTACTAC	NA	False	NA	NA	False	AATAAA	-18	NA	100968803	100951805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963078_100965827_100965865_100966382_100966474_100968696
ES.26459.6	chr5	-	4409	9	NIC	ENSMUSG00000035234.19	novel	1668	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	80	junction_1	38.8182866056708	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968814	100953057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100965865_100966382_100966474_100968696
ES.26459.7	chr5	-	1664	10	NNC	ENSMUSG00000035234.19	novel	1668	10	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.8919807725574	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	-6	True	AATAAA	-16	NA	100968797	100953060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_100953318_100953763_100954353_100954633_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.8	chr5	-	1690	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	-25	3	0	-3	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	-6	True	AATAAA	-16	NA	100968831	100953060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.26459.9	chr5	-	2124	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	12	3	-6	-3	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTAATATCTTATT	NA	False	NA	-6	True	AATAAA	-16	NA	100968819	100953060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ES.2646.1	chr10	+	2769	6	NNC	ENSMUSG00000063428.9	novel	3000	5	NA	NA	-149	-503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.13687742827162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCTTACGATTGGCC	NA	False	NA	NA	False	AATAAA	-18	NA	40505857	40525424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523241_40523365_40523469
ES.2646.2	chr10	+	919	5	FSM	ENSMUSG00000063428.9	ENSMUST00000213442.2	2408	5	-45	1534	-10	-1534	multi-exon	FALSE	canonical	3	5	junction_2	1.29903810567666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGACTTTTTGTTTTGTT	NA	False	NA	NA	False	TTTAAA	-40	NA	40505996	40516030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40515663
ES.2646.3	chr10	+	2998	5	FSM	ENSMUSG00000063428.9	ENSMUST00000019977.8	3000	5	2	0	2	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	40506008	40525927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523469
ES.2646.4	chr10	+	2718	6	NNC	ENSMUSG00000063428.9	novel	3000	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.63818119165458	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	40506058	40525927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523469_40523582_40523811
ES.26460.1	chr5	+	184	1	Intergenic	novelGene_21978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	100971911	100972095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100971900_100972100
ES.26461.1	chr5	+	177	1	Intergenic	novelGene_21979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100985422	100985599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_100985400_100985600
ES.26462.1	chr5	+	3006	13	NNC	ENSMUSG00000029314.15	novel	3035	12	NA	NA	-187	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.60984377120991	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGTTGCATTATTC	NA	False	NA	2	True	AATAAA	-13	NA	100993391	101046962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_100993660_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ES.26462.3	chr5	+	2909	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	-25	0	-25	0	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	5	True	AATAAA	-16	NA	100994059	101046965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ES.26462.5	chr5	+	2872	13	ISM	ENSMUSG00000029314.15	ENSMUST00000112887.8	3059	14	293	4	6	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	8.09449401342254	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGTGTTGCATTATT	NA	False	NA	1	True	AATAAA	-12	NA	100994288	101046961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_100994424_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ES.26463.1	chr5	-	177	1	Intergenic	novelGene_21980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTTAAAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	100997246	100997069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_100997100_100997200
ES.26464.1	chr5	-	169	1	Intergenic	novelGene_21981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAGTCATATCAA	NA	False	NA	NA	False	NA	NA	NA	101020719	101020550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_101020600_101020700
ES.26465.1	chr5	-	176	1	Intergenic	novelGene_21982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAGAACGAGTGAGCAG	NA	False	NA	NA	False	NA	NA	NA	101030759	101030583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_101030600_101030800
ES.26466.1	chr5	+	181	1	Intergenic	novelGene_21983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAACTATTA	NA	False	NA	NA	False	NA	NA	NA	101056083	101056264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_101056100_101056300
ES.26467.1	chr5	-	199	1	Intergenic	novelGene_21984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	101304348	101304149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_101304100_101304300
ES.26468.1	chr5	-	187	1	Intergenic	novelGene_21985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATATGAAAAATATAAAGT	NA	False	NA	NA	False	NA	NA	NA	101653092	101652905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_101652900_101653100
ES.26469.1	chr5	+	175	1	Intergenic	novelGene_21986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	101779893	101780068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_101779900_101780100
ES.2647.1	chr10	+	3136	5	FSM	ENSMUSG00000045555.4	ENSMUST00000058747.4	1529	5	44	-1651	44	1651	multi-exon	TRUE	canonical	0	0	junction_3	1.08972473588517	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTAAGGGTTTAGGTGC	NA	False	NA	NA	False	AATAAA	-2	NA	40559321	40688730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40559661_40605982_40606082_40613670_40613811_40622327_40622557_40686401
ES.26470.1	chr5	+	1772	2	NNC	ENSMUSG00000106164.2	novel	1178	2	NA	NA	14	617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCCAAAGCCTGTATT	NA	False	NA	NA	False	NA	NA	NA	101851465	101854333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101851968_101853063
ES.26471.1	chr5	+	176	1	Intergenic	novelGene_21987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101886143	101886319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_101886100_101886300
ES.26472.1	chr5	+	3741	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-58	-1	combination_of_known_splicesites	TRUE	canonical	3	11	junction_6	17.1399468429099	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCGCTGCTGTTTTCT	NA	False	NA	9	True	AATAAA	-18	NA	101912937	101971723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.10	chr5	+	3508	9	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	25	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	26.2532736054001	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCTGTTTTCTAATCGG	NA	False	NA	15	True	AATAAA	-24	NA	101913020	101971729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101913356_101944869_101944968_101946242_101946383_101954428_101954488_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.11	chr5	+	4769	6	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	1519	-9	intron_retention	FALSE	canonical	3	47	junction_5	8.42377587546108	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTGACTTTGCGCTGC	NA	False	NA	1	True	AATAAA	-10	NA	101955932	101971715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.12	chr5	+	2364	1	Genic_Genomic	ENSMUSG00000029330.9	novel	NA	NA	NA	NA	17172	2225	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCCTAAAACAACAACAACAA	2825	False	NA	NA	False	NA	NA	NA	101971585	101973949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_101971600_101973900
ES.26472.2	chr5	+	2137	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-50	1837	-50	574	multi-exon	FALSE	canonical	3	31	junction_6	11.4561361529774	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAGAGCG	NA	False	NA	NA	False	NA	NA	NA	101912945	101969887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.3	chr5	+	3972	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	-49	1	-49	-1	multi-exon	FALSE	canonical	3	31	junction_6	11.4561361529774	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCGCTGCTGTTTTCT	NA	False	NA	9	True	AATAAA	-18	NA	101912946	101971723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.4	chr5	+	3874	12	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-36	-3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	15.7096590806342	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGCGCTGCTGTTTT	NA	False	NA	7	True	AATAAA	-16	NA	101912959	101971721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.5	chr5	+	2189	13	NNC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-28	574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.5651401108793	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAGAGCG	NA	False	NA	NA	False	NA	NA	NA	101912967	101969887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101967867_101968025_101969299
ES.26472.6	chr5	+	3787	11	NNC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.2703522842171	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCGCTGCTGTTTTCT	NA	False	NA	9	True	AATAAA	-18	NA	101912979	101971723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101913356_101929221_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.7	chr5	+	1848	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	2	577	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	17.1399468429099	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAGAGCGATT	NA	False	NA	NA	False	ATTAAA	-1	NA	101912997	101969890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.8	chr5	+	3805	12	NNC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.4396343571513	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGCTGCTGTTTTCTA	NA	False	NA	10	True	AATAAA	-19	NA	101913002	101971724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946354_101954428_101954488_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ES.26472.9	chr5	+	2993	4	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	16	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.0678160675491	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGACTTTGCGCTGCT	NA	False	NA	2	True	AATAAA	-11	NA	101913011	101971716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101913356_101929240_101929369_101965718_101965823_101969299
ES.26473.1	chr5	-	1967	1	Intergenic	novelGene_21988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCAGATGAGTAGCTG	749	False	NA	NA	False	NA	NA	NA	101921855	101919888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_101919900_101921900
ES.26474.1	chr5	-	2949	1	Antisense	novelGene_ENSMUSG00000029330.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATAGGCAGGCATGAG	NA	False	NA	NA	False	ATTAAA	-9	NA	101954621	101951672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_101951700_101954600
ES.26475.1	chr5	+	3638	3	NNC	ENSMUSG00000092354.8	novel	461	4	NA	NA	-10739	672	intron_retention	FALSE	canonical	0	0	junction_1	72	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	5782	False	NA	NA	False	AATAAA	-12	NA	101974542	101994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101974659_101989616_101989940_101991749
ES.26475.10	chr5	+	961	4	NNC	ENSMUSG00000092354.8	novel	787	3	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_2	67.6477806156434	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTTGGCTCAATAC	NA	False	NA	19	True	ATTAAA	-29	NA	101985308	101992202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985425_101986286_101986356_101989616_101989940_101991749
ES.26475.11	chr5	+	1799	4	NNC	ENSMUSG00000092354.8	novel	791	4	NA	NA	1	674	intron_retention	FALSE	canonical	0	0	junction_1	2.82842712474619	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985308	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985466_101989616_101989940_101992916_101993115_101993829
ES.26475.12	chr5	+	2680	2	ISM	ENSMUSG00000092354.8	ENSMUST00000173965.8	707	4	16	-52	0	-3	intron_retention	FALSE	canonical	3	40	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCAATTTCCTTTGGC	NA	False	NA	12	True	ATTAAA	-22	NA	101985323	101992195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_101985425_101989616
ES.26475.13	chr5	+	3636	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-67	672	intron_retention	FALSE	canonical	3	8	junction_1	68	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	101987953	101994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988068_101989616_101989940_101991749
ES.26475.14	chr5	+	2649	2	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-57	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCAATTTCCTTTGGC	NA	False	NA	12	True	ATTAAA	-22	NA	101987963	101992195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988034_101989616
ES.26475.15	chr5	+	841	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-57	-1	intron_retention	FALSE	canonical	0	0	junction_1	72	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAATTTCCTTTGGCTC	NA	False	NA	14	True	ATTAAA	-24	NA	101987963	101992197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988034_101989616_101989940_101991749
ES.26475.16	chr5	+	3658	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-57	674	intron_retention	FALSE	canonical	3	132	junction_1	6	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987963	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101988098_101989616_101989940_101991749
ES.26475.17	chr5	+	3592	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-57	672	intron_retention	FALSE	canonical	0	0	junction_1	72	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	101987963	101994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988034_101989616_101989940_101991749
ES.26475.18	chr5	+	5466	2	ISM	ENSMUSG00000092354.8	ENSMUST00000174312.2	619	3	-55	-2752	-55	674	intron_retention	FALSE	canonical	3	132	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987965	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_101988098_101989616
ES.26475.19	chr5	+	4242	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-40	672	intron_retention	FALSE	canonical	0	0	junction_1	72	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	101987980	101994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988701_101989616_101989940_101991749
ES.26475.2	chr5	+	2369	4	NNC	ENSMUSG00000092354.8	novel	461	4	NA	NA	-3256	674	intron_retention	FALSE	non_canonical	0	0	junction_1	67.8822509939086	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101982025	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101982127_101989616_101989940_101991749_101993562_101994817
ES.26475.20	chr5	+	1971	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-38	-719	intron_retention	FALSE	canonical	0	0	junction_1	72	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGCAGTCTGGCTCCT	NA	False	NA	NA	False	AGTAAA	-16	NA	101987982	101993346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988034_101989616_101989940_101991749
ES.26475.21	chr5	+	985	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-38	98	intron_retention	FALSE	canonical	3	132	junction_1	6	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACCAGACCAGCTAT	NA	False	NA	113	True	ATTAAA	-27	NA	101987982	101992296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_101988098_101989616_101989940_101991749
ES.26475.22	chr5	+	4193	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-38	674	intron_retention	FALSE	non_canonical	0	0	junction_2	66	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987982	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988098_101989616_101993562_101994817
ES.26475.23	chr5	+	5712	2	NNC	ENSMUSG00000092354.8	novel	787	3	NA	NA	-38	674	intron_retention	FALSE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987982	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101993562_101994817
ES.26475.25	chr5	+	1570	3	NNC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-32	86	intron_retention	FALSE	canonical	0	0	junction_1	72	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTCAGCCCAAAAGTAC	NA	False	NA	101	True	ATTAAA	-15	NA	101987988	101992284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101988701_101989616_101989940_101991749
ES.26475.3	chr5	+	3675	3	FSM	ENSMUSG00000092354.8	ENSMUST00000174864.2	787	3	-44	-2844	-8	674	multi-exon	FALSE	canonical	3	40	junction_1	52	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985273	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_101985425_101989616_101989940_101991749
ES.26475.4	chr5	+	4176	3	NNC	ENSMUSG00000092354.8	novel	791	4	NA	NA	-3	674	intron_retention	FALSE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985278	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985377_101989616_101993562_101994817
ES.26475.5	chr5	+	5466	2	ISM	ENSMUSG00000092354.8	ENSMUST00000173965.8	707	4	-15	-2807	11	674	intron_retention	FALSE	canonical	3	40	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985292	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_101985425_101989616
ES.26475.6	chr5	+	2392	4	NNC	ENSMUSG00000092354.8	novel	787	3	NA	NA	-7	674	intron_retention	FALSE	non_canonical	0	0	junction_3	60.6923022759522	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985300	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985425_101989616_101989940_101991749_101993562_101994817
ES.26475.7	chr5	+	2344	4	NNC	ENSMUSG00000092354.8	novel	787	3	NA	NA	-7	674	intron_retention	FALSE	non_canonical	0	0	junction_1	67.8822509939086	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101985300	101994950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985377_101989616_101989940_101991749_101993562_101994817
ES.26475.8	chr5	+	761	4	FSM	ENSMUSG00000092354.8	ENSMUST00000173965.8	707	4	0	-54	0	-1	multi-exon	FALSE	canonical	1	8	junction_2	58.0574428188726	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAATTTCCTTTGGCTC	NA	False	NA	14	True	ATTAAA	-24	NA	101985307	101992197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_101985425_101989616_101989710_101989836_101989940_101991749
ES.26475.9	chr5	+	4193	3	NNC	ENSMUSG00000092354.8	novel	707	4	NA	NA	0	672	intron_retention	FALSE	non_canonical	0	0	junction_2	20	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGCTTGTCAAGTAC	NA	False	NA	NA	False	AATAAA	-12	NA	101985307	101994948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_101985425_101989616_101993562_101994817
ES.26476.1	chr5	+	3183	1	Antisense	novelGene_ENSMUSG00000043940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCTTACTGATTAAATG	NA	False	NA	NA	False	AATAAA	-34	NA	101995317	101998500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_101995300_101998500
ES.26477.1	chr5	+	5430	31	Genic_Genomic	ENSMUSG00000106451.2	novel	1345	1	NA	NA	-60190	10969	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCGTTGTGAACTGCA	NA	False	NA	NA	False	NA	NA	NA	102044282	102116786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_102044445_102046292_102046434_102047930_102048115_102049635_102049854_102050304_102050426_102053968_102054058_102055303_102055477_102055551_102055624_102058790_102058944_102059901_102060094_102061037_102061151_102063204_102063364_102065263_102065498_102067261_102067444_102070279_102070502_102070623_102070725_102071724_102071950_102074284_102074408_102077751_102077962_102078693_102078869_102083852_102083940_102085147_102085605_102089304_102089499_102090884_102090987_102091745_102092214_102096672_102096841_102099090_102099280_102100847_102101040_102105249_102105412_102108981_102109094_102116736
ES.26478.1	chr5	+	4688	1	Intergenic	novelGene_21990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAAGTAGTGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	102145052	102149740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_102145100_102149700
ES.26479.1	chr5	+	4456	1	Intergenic	novelGene_21992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102205941	102210397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_102205900_102210400
ES.2648.1	chr10	-	175	1	Intergenic	novelGene_2016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTCAACCTC	NA	False	NA	NA	False	NA	NA	NA	40624438	40624263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_40624300_40624400
ES.26480.1	chr5	-	14349	68	NIC	ENSMUSG00000043940.16	novel	14274	67	NA	NA	-14	4	combination_of_known_junctions	TRUE	canonical	2	3	junction_31	16.3526790958255	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTTGTTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-26	NA	102217801	101980817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047879_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.13	chr5	-	13061	62	ISM	ENSMUSG00000043940.16	ENSMUST00000212024.2	10539	65	24037	-2960	-19845	-242	3prime_fragment	TRUE	canonical	2	3	junction_31	16.7546437304969	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGACTGGATTGATTGT	NA	False	NA	NA	False	AGTAAA	-13	NA	102105387	101981063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047924_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249
ES.26480.14	chr5	-	5443	25	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	98947	-1891	-31098	670	3prime_fragment	FALSE	canonical	3	11	junction_21	6.38139657302555	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCTGAAGAGCTTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	102030477	101982132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288
ES.26480.15	chr5	-	5414	30	ISM	ENSMUSG00000043940.16	ENSMUST00000212024.2	10539	65	93403	-1225	-36642	4	3prime_fragment	FALSE	canonical	2	5	junction_29	7.74811549332988	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTGTTCTACTAGT	NA	False	NA	NA	False	AATATA	-25	NA	102036021	101982798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952
ES.26480.17	chr5	-	11186	61	NIC	ENSMUSG00000043940.16	novel	10539	65	NA	NA	-19772	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	17.223844905634	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTTAGTTATTTAAT	NA	False	NA	NA	False	AATATA	-12	NA	102105314	101982811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047924_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249
ES.26480.18	chr5	-	3143	16	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-10398	442	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	7.56012933457858	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCTGTAACATGAGAC	8614	False	NA	NA	False	TATAAA	-28	NA	102009777	101983581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102009440
ES.26480.19	chr5	-	4445	30	NNC	ENSMUSG00000043940.16	novel	10539	65	NA	NA	-36605	271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	8.12711145161477	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTTTCTTGCATCTC	NA	False	NA	NA	False	NA	NA	NA	102035984	101983752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034959_102035952
ES.26480.2	chr5	-	6979	28	NIC	ENSMUSG00000043940.16	novel	10539	65	NA	NA	-36605	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.78472923680977	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTTTTTAAATT	NA	False	NA	NA	False	AATAAA	-25	NA	102035984	101980818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_101984148_101991882_101992081_101992413_101992526_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952
ES.26480.20	chr5	-	5729	15	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-10439	-4748	intron_retention	FALSE	canonical	2	4	junction_14	7.24780051083761	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAGCTAAGCAATTTA	8573	False	NA	NA	False	AATAAA	-15	NA	102009818	101988771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102009440
ES.26480.22	chr5	-	3376	21	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-21411	-7423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.80320446995976	100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCGGACAGTTTAGGAAT	NA	False	NA	NA	False	TTTAAA	-43	NA	102020790	101991446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101992081_101992413_101992526_101992786_101993106_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697
ES.26480.25	chr5	-	6564	43	NNC	ENSMUSG00000043940.16	novel	641	5	NA	NA	65	-24014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6489610930615	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTTCCAAAAATGTTA	NA	False	NA	NA	False	NA	NA	NA	102085477	102008037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_102008172_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047879_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147
ES.26480.26	chr5	-	178	1	Intergenic	novelGene_21989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGTCTTTCCAAA	NA	False	NA	NA	False	NA	NA	NA	102008222	102008044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102008000_102008200
ES.26480.27	chr5	-	8779	52	NNC	ENSMUSG00000043940.16	novel	3858	16	NA	NA	-16	-29234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2842690426831	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGCCTGCACTGTTTG	NA	False	NA	NA	False	NA	NA	NA	102217803	102013257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_102013476_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047924_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.28	chr5	-	3118	4	ISM	ENSMUSG00000043940.16	ENSMUST00000174598.8	10581	65	109555	29252	-20490	-29252	internal_fragment	FALSE	canonical	3	17	junction_3	1.63299316185545	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102019869	102013275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_102014144_102015359_102015446_102015898_102016020_102017826
ES.26480.29	chr5	-	5498	32	NIC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	229	-39366	combination_of_known_junctions	FALSE	canonical	1	1	junction_31	19.0740383402577	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGTGTGTGTTGACCA	NA	False	NA	NA	False	ATTAAA	-17	NA	102085313	102023389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047879_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102085147
ES.26480.3	chr5	-	7849	7	NIC	ENSMUSG00000043940.16	novel	14274	67	NA	NA	-998	0	intron_retention	FALSE	canonical	3	14	junction_1	6.52346193026031	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	102000377	101980821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101996372_101997134_101997315_101999105_101999265_102000088
ES.26480.30	chr5	-	7900	46	NNC	ENSMUSG00000043940.16	novel	14274	67	NA	NA	16851	-39581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_45	18.3954369006401	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAACATGTCTAGATACT	NA	False	NA	NA	False	TATAAA	-32	NA	102200936	102023604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_102023876_102025871_102025926_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034937_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047924_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102200756
ES.26480.31	chr5	-	6278	35	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-11	63460	-11	26401	5prime_fragment	FALSE	canonical	3	23	junction_2	9.22184295806715	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTACTCAGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	102217798	102044281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_102044445_102046292_102046428_102047879_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.32	chr5	-	3957	17	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-15	96350	-15	0	5prime_fragment	FALSE	canonical	3	36	junction_3	8.74642784226795	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTCCATGGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	102217802	102077171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.33	chr5	-	4682	15	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-11	101337	-11	788	5prime_fragment	FALSE	canonical	3	36	junction_1	9.26150690784613	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATATTTGTACCCTCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	102217798	102082158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.34	chr5	-	3199	15	ISM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	-10	102819	-10	-694	5prime_fragment	FALSE	canonical	3	36	junction_1	9.26150690784613	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGGGGATATGTAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	102217797	102083640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ES.26480.35	chr5	-	1901	7	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-11693	-694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.0034719208664	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGGGGATATGTAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	102097235	102083640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102097022
ES.26480.36	chr5	-	2745	13	NNC	ENSMUSG00000043940.16	novel	3858	16	NA	NA	-11	-6061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.0338184264801	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTAAGTTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	102217798	102089007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217457
ES.26480.37	chr5	-	5754	2	Genic_Genomic	ENSMUSG00000043940.16	novel	14274	67	NA	NA	-29455	-70125	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACAATTTGCAGTAC	NA	False	NA	NA	False	TTTAAA	-15	NA	102158879	102153071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_102154874_102154927
ES.26480.38	chr5	-	207	1	Intergenic	novelGene_21991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTATACACGTATAGGC	NA	False	NA	NA	False	NA	NA	NA	102192558	102192351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102192400_102192600
ES.26480.6	chr5	-	3547	2	NNC	ENSMUSG00000043940.16	novel	14274	67	NA	NA	14276	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAGTTGTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	101985103	101980821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101984148_101984882
ES.26480.8	chr5	-	5904	16	NNC	ENSMUSG00000043940.16	novel	10581	65	NA	NA	-10410	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.447868660297	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATAATTTTAAGTTGTT	8602	False	NA	NA	False	AATAAA	-17	NA	102009789	101980826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_101984142_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102009440
ES.26481.1	chr5	-	175	1	Intergenic	novelGene_21993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAACAATGTA	NA	False	NA	NA	False	NA	NA	NA	102231607	102231432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102231400_102231600
ES.26482.1	chr5	-	174	1	Intergenic	novelGene_21994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	102299095	102298921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102298900_102299100
ES.26483.1	chr5	+	6644	2	Intergenic	novelGene_21995	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTTGCTTAAGGAATT	NA	False	NA	NA	False	NA	NA	NA	102557101	102563957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_102557469_102557680
ES.26484.1	chr5	-	214	1	Intergenic	novelGene_21996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAAACTCTAACTAGG	NA	False	NA	NA	False	AATGAA	-8	NA	102655158	102654944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102654900_102655200
ES.26485.1	chr5	-	178	1	Intergenic	novelGene_21997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACACGG	NA	False	NA	NA	False	NA	NA	NA	102729895	102729717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102729700_102729900
ES.26486.1	chr5	-	204	1	Intergenic	novelGene_21998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTACAGTTGGATCTCA	NA	False	NA	NA	False	NA	NA	NA	102772633	102772429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102772400_102772600
ES.26487.1	chr5	-	185	1	Intergenic	novelGene_21999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGTTCTAATATAAC	NA	False	NA	NA	False	NA	NA	NA	102803689	102803504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102803500_102803700
ES.26488.1	chr5	-	1369	1	Intergenic	novelGene_22000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	102818806	102817437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_102817400_102818800
ES.26489.1	chr5	-	1495	10	NIC	ENSMUSG00000046709.19	novel	6761	13	NA	NA	43	-5550	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.05409255338946	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAATTATACCATTTC	NA	False	NA	NA	False	NA	NA	NA	103174818	103073693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_103074016_103076088_103076153_103111332_103111458_103114311_103114495_103135068_103135141_103137485_103137652_103138369_103138509_103139734_103139794_103144449_103144580_103174583
ES.26489.2	chr5	-	2750	5	FSM	ENSMUSG00000046709.19	ENSMUST00000128869.8	2518	5	35	-267	35	267	multi-exon	FALSE	canonical	0	0	junction_1	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACCCCACAGGGATG	NA	False	NA	NA	False	AATAAA	-14	NA	103174826	103135472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_103137652_103138369_103138509_103139734_103139794_103144449_103144580_103174583
ES.2649.1	chr10	+	155	1	Intergenic	novelGene_2017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	40737587	40737742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40737600_40737700
ES.26490.1	chr5	-	160	1	Intergenic	novelGene_22001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTCCT	NA	False	NA	NA	False	NA	NA	NA	103455767	103455607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103455600_103455800
ES.26491.1	chr5	+	159	1	Intergenic	novelGene_22002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103482564	103482723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103482600_103482700
ES.26492.1	chr5	-	2410	1	FSM	ENSMUSG00000104684.2	ENSMUST00000200007.2	2393	1	-14	-3	-14	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGTCTTCTTAGTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	103504578	103502168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_103502200_103504600
ES.26493.1	chr5	-	162	1	Intergenic	novelGene_22003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	103517867	103517705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103517700_103517900
ES.26494.1	chr5	+	2973	15	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.4906159875413	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCATGCGTTTGTTTTCC	NA	False	NA	NA	False	AGTAAA	-17	NA	103573024	103689299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671556_103676620_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26494.10	chr5	+	5134	27	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-314	38598	-5	16366	5prime_fragment	FALSE	canonical	2	11	junction_18	14.246405131527	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTCAGTTCCGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	103573052	103707571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002
ES.26494.11	chr5	+	3449	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-311	56864	-2	5	5prime_fragment	FALSE	canonical	3	18	junction_6	10.5656622127096	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTGTTTTCCTTTTAT	NA	False	NA	NA	False	AGTAAA	-23	NA	103573055	103689305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26494.12	chr5	+	7514	47	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	1	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.4144041589994	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTGAAGCCAGTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	103573058	103746012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688839_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730608_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.13	chr5	+	3780	18	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-307	56529	2	340	intron_retention	FALSE	canonical	3	18	junction_6	10.5656622127096	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCCTCGTGCCAGCAC	NA	False	NA	NA	False	AGTAAA	-17	NA	103573059	103689640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26494.14	chr5	+	6180	38	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	2	-15430	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	12.7567567567568	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCTGTTGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	103573059	103730739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.15	chr5	+	3828	5	NNC	ENSMUSG00000034573.15	novel	3408	7	NA	NA	3	-22788	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	27.6450718935582	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAAACCAGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	103573060	103628932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103625445_103625494_103626619_103627322
ES.26494.16	chr5	+	6735	41	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	23	-15436	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	13.2841776185054	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATAAGTCCTGTTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	103573080	103730733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704101_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.17	chr5	+	6187	40	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	24	-15440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	13.7895328530397	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAGATAAGTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	103573081	103730729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103706984_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.18	chr5	+	5299	16	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	24	-2	intron_retention	FALSE	canonical	3	5	junction_5	13.2554391351877	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCATGCGTTTGTTTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	103573081	103689298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26494.19	chr5	+	3346	18	NNC	ENSMUSG00000034573.15	novel	3439	18	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	14.266373462261	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573081	103689300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103674983_103676668_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26494.2	chr5	+	6437	37	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-342	23058	-33	-23058	5prime_fragment	FALSE	canonical	2	11	junction_18	13.1591633566467	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTAGGACTGCTCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	103573024	103723111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944
ES.26494.20	chr5	+	7692	47	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	24	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	13.7583794711106	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACCAATTCAGACATCC	NA	False	NA	NA	False	AATAAA	-19	NA	103573081	103746218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734582_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.21	chr5	+	5600	32	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-23	21417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	14.6251817673274	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTCTTATTTCTCC	NA	False	NA	NA	False	AATAAA	-15	NA	103573082	103712622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712449
ES.26494.22	chr5	+	3125	7	ISM	ENSMUSG00000034573.15	ENSMUST00000196014.5	2608	16	-20	31249	-20	-5363	5prime_fragment	FALSE	canonical	1	1	junction_6	19.8697145313051	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATGTGTGTCTAGTTT	NA	False	NA	NA	False	AATATA	-22	NA	103573085	103646357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103644188
ES.26494.23	chr5	+	6315	36	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-19	-23061	combination_of_known_splicesites	FALSE	canonical	1	2	junction_19	14.0263891232467	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAACAGTAGGACTGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	103573086	103723108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944
ES.26494.24	chr5	+	8580	37	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-19	-15432	intron_retention	FALSE	canonical	3	9	junction_16	12.7579556394732	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGTCCTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-31	NA	103573086	103730737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.25	chr5	+	6290	41	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-19	-15436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7916641490431	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATAAGTCCTGTTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	103573086	103730733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103590304_103590427_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.26	chr5	+	7503	44	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-18	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	13.5682478573645	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAGACAACCAATTC	NA	False	NA	NA	False	AATAAA	-11	NA	103573087	103746210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734582_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.27	chr5	+	2421	14	NNC	ENSMUSG00000034573.15	novel	2608	16	NA	NA	-11	-2596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4053654245503	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGAGTGCACAAGGC	NA	False	NA	NA	False	ATTAAA	-25	NA	103573094	103675010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103590304_103590427_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861
ES.26494.28	chr5	+	7711	45	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	1	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	13.9680124534891	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAGACAACCAATTC	NA	False	NA	NA	False	AATAAA	-11	NA	103573106	103746210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734582_103734676_103735835_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.29	chr5	+	172	1	Intergenic	novelGene_22004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	103600936	103601108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103600900_103601100
ES.26494.3	chr5	+	8296	48	FSM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-324	-57	-15	57	multi-exon	FALSE	canonical	1	2	junction_41	13.2327768430788	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGACATCCTCAGCGTC	NA	False	NA	NA	False	AATAAA	-27	NA	103573042	103746226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.30	chr5	+	5842	36	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-37344	-15440	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	10.9141361246293	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAGATAAGTCCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	103640087	103730729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707898_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.31	chr5	+	6436	39	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-27913	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	11.228303177407	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAACCAATTCAGACAT	NA	False	NA	NA	False	AATAAA	-17	NA	103649518	103746216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717561_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.32	chr5	+	193	1	Intergenic	novelGene_22005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	103654738	103654931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103654700_103654900
ES.26494.33	chr5	+	181	1	Intergenic	novelGene_22006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACATAACA	NA	False	NA	NA	False	NA	NA	NA	103688207	103688388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103688200_103688400
ES.26494.34	chr5	+	1885	10	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	50380	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.64069013221508	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAGACAACCAATTC	4812	False	NA	NA	False	AATAAA	-11	NA	103727811	103746210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103727978_103728535_103728619_103730608_103730643_103734582_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ES.26494.35	chr5	+	168	1	Intergenic	novelGene_22007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGAGTTATGG	NA	False	NA	NA	False	NA	NA	NA	103733924	103734092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103733900_103734100
ES.26494.36	chr5	+	168	2	Intergenic	novelGene_22008	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAACCTAAAG	NA	False	NA	NA	False	NA	NA	NA	103733926	103799472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103734076_103799453
ES.26494.4	chr5	+	6212	38	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-14	-15432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	13.3602115255996	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGTCCTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-31	NA	103573043	103730737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103706984_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.5	chr5	+	6217	40	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-14	-15430	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	13.2461647656725	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCTGTTGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	103573043	103730739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.6	chr5	+	6756	41	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	-318	15432	-9	-15432	5prime_fragment	FALSE	canonical	2	11	junction_18	12.6273265183094	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGTCCTGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-31	NA	103573048	103730737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
ES.26494.7	chr5	+	3366	18	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	14.2107225952166	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTTTGTTTTCCTTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	103573050	103689303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681182_103684579_103684743_103688837
ES.26494.8	chr5	+	5864	36	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	-6	-23058	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	13.8509264406864	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTAGGACTGCTCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	103573051	103723111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944
ES.26494.9	chr5	+	2901	17	NIC	ENSMUSG00000034573.15	novel	3439	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	12.8403660383963	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573052	103689300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ES.26495.1	chr5	-	4042	3	Antisense	novelGene_ENSMUSG00000034573.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACCTGTATATACTGTT	NA	False	NA	NA	False	NA	NA	NA	103726982	103722648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_103724030_103724070_103724210_103724460
ES.26496.1	chr5	-	2794	7	NNC	ENSMUSG00000029321.2	novel	2124	6	NA	NA	-11446	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.763762615825973	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAACCCTTTCGTGTT	6472	False	NA	NA	False	ATTAAA	-21	NA	103788715	103753580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_103754614_103756846_103757005_103760235_103760409_103765496_103765586_103766221_103766341_103776721_103777741_103788512
ES.26497.1	chr5	-	155	2	Antisense	novelGene_ENSMUSG00000088121.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	103812562	103789388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_103789396_103812414
ES.26498.1	chr5	+	4282	21	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	-13153	-4017	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	68.4061400752886	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTGGAACACACCT	2633	False	NA	NA	False	AATACA	-21	NA	103827086	103999171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103827191_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.10	chr5	+	3507	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	1	5529	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	26.8505235942235	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTACTCTCAGTGAACACT	NA	False	NA	NA	False	AAGAAA	-21	NA	103840240	103995648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579
ES.26498.11	chr5	+	7913	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	67.1788488471357	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGAGCCTGTGGCTT	NA	False	NA	20	True	AATAAA	-17	NA	103840240	104003184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001863_104002369
ES.26498.12	chr5	+	7950	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	2	-473	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTGTCAAGGTGATAA	NA	False	NA	NA	False	ATTAAA	-17	NA	103840241	104002715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.13	chr5	+	6842	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	4	-1523	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	65.4565894081941	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATACCTCTTACAGATTC	NA	False	NA	NA	False	NA	NA	NA	103840243	104001665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.14	chr5	+	7438	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	5	-481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	67.1788488471357	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103840244	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001869_104002369
ES.26498.17	chr5	+	4249	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	15	-4161	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTGTCATCTCAGAA	NA	False	NA	NA	False	GATAAA	-28	NA	103840254	103999027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.18	chr5	+	7848	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	87.6065636810393	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTGTGGCTTTTA	NA	False	NA	23	True	AATAAA	-20	NA	103840258	104003187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001869_104002369
ES.26498.19	chr5	+	7421	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	71.7179833500808	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103840258	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.2	chr5	+	8300	21	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	-13149	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	68.4061400752886	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCTTTTATTTTGT	2637	False	NA	29	True	AATAAA	-26	NA	103827090	104003193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103827191_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.20	chr5	+	8347	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-3	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	65.4565894081941	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGAGCCTGTGGCTTT	NA	False	NA	21	True	AATAAA	-18	NA	103840258	104003185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.21	chr5	+	8327	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	67.327413506077	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGTTGAGCCTGTGG	NA	False	NA	17	True	AATAAA	-14	NA	103840258	104003181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103995579_103995718_103997215_103997443_103998567
ES.26498.22	chr5	+	4438	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	20	-4075	intron_retention	FALSE	canonical	3	246	junction_10	29.2800973311735	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGATTTTGTTTTCTTTT	NA	False	NA	NA	False	TTTAAA	-27	NA	103840259	103999113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.23	chr5	+	3352	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	20	-4074	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	71.7179833500808	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTTTGTTTTCTTTTC	NA	False	NA	NA	False	TTTAAA	-28	NA	103840259	103999114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.25	chr5	+	6886	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	20	-1519	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTTACAGATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	103840259	104001669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.27	chr5	+	4240	19	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	20	-4076	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	72.116418226211	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGATTTTGTTTTCTTT	NA	False	NA	NA	False	TTTAAA	-26	NA	103840259	103999112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.28	chr5	+	5209	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	67.1788488471357	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTGTGGCTTTTA	NA	False	NA	23	True	AATAAA	-20	NA	103840260	104003187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_103999629_104002822
ES.26498.3	chr5	+	305	1	Intergenic	novelGene_22009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTTTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	103836018	103836323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103836000_103836300
ES.26498.31	chr5	+	3474	19	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	23	5529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.2149477596394	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTACTCTCAGTGAACACT	NA	False	NA	NA	False	AAGAAA	-21	NA	103840262	103995648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840464_103863220_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579
ES.26498.32	chr5	+	8384	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	90.1977826778464	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGGAGTTGAGCCTGT	NA	False	NA	15	True	AATAAA	-12	NA	103840266	104003179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103963995_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990180_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.34	chr5	+	7937	23	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	101.390660889958	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTGTGGCTTTTA	NA	False	NA	23	True	AATAAA	-20	NA	103840269	104003187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103862091_103862135_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001870_104002369
ES.26498.35	chr5	+	4326	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	32	-4022	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	70.3227226332965	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCCATCTGTGGAACA	NA	False	NA	NA	False	AATACA	-16	NA	103840271	103999166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.39	chr5	+	4326	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	53	-4086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.8342078723453	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGGCTTTAAAGATTT	NA	False	NA	NA	False	TTTAAA	-16	NA	103840292	103999102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103862094_103862135_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.4	chr5	+	157	1	Intergenic	novelGene_22010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103836021	103836178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103836000_103836200
ES.26498.40	chr5	+	7816	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	61	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.5315414648398	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGAGCCTGTGGCTTT	NA	False	NA	21	True	AATAAA	-18	NA	103840300	104003185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001870_104002369
ES.26498.42	chr5	+	8350	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	65	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	68.5024817068696	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103840304	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995722_103997223_103997443_103998567
ES.26498.43	chr5	+	4277	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	66	-4076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.5513493667338	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGATTTTGTTTTCTTT	NA	False	NA	NA	False	TTTAAA	-26	NA	103840305	103999112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981341_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.45	chr5	+	7819	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	69	-481	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	65.4565894081941	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103840308	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.49	chr5	+	7800	23	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	1112	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.266100795429	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAGTTGAGCCTGTG	NA	False	NA	16	True	AATAAA	-13	NA	103841351	104003180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103841377_103850660_103850756_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001863_104002369
ES.26498.5	chr5	+	4585	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	-163	-4003	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGTGAAGGACTCCA	NA	False	NA	NA	False	AATACA	-35	NA	103840076	103999185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.50	chr5	+	4290	21	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	1156	-4025	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	68.4061400752886	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGGCCATCTGTGGA	NA	False	NA	NA	False	AATACA	-13	NA	103841395	103999163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103841516_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.51	chr5	+	8244	21	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	1223	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	68.4061400752886	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGAGCCTGTGGCTT	NA	False	NA	20	True	AATAAA	-17	NA	103841462	104003184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103841516_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.52	chr5	+	7684	21	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	22974	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	68.8025435576331	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103863213	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001863_104002369
ES.26498.53	chr5	+	8191	20	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	22974	-6	combination_of_known_junctions	FALSE	canonical	3	246	junction_10	29.27337950976	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103863213	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.55	chr5	+	8274	20	NNC	ENSMUSG00000029313.19	novel	688	2	NA	NA	30076	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.3461957579636	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103870315	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103870932_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.56	chr5	+	3732	1	Intergenic	novelGene_22013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTCTTTAGCTGTCC	NA	False	NA	NA	False	NA	NA	NA	103881193	103884925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103881200_103884900
ES.26498.57	chr5	+	174	1	Intergenic	novelGene_22014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	103881238	103881412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_103881200_103881400
ES.26498.58	chr5	+	4563	20	FSM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	-265	4025	-265	-4025	multi-exon	FALSE	canonical	2	26	junction_1	65.0524612499899	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGGCCATCTGTGGA	NA	False	NA	NA	False	AATACA	-13	NA	103901762	103999163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.59	chr5	+	8336	20	FSM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	-15	2	-15	-2	multi-exon	FALSE	canonical	2	26	junction_1	65.0524612499899	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGAGCCTGTGGCTTTT	NA	False	NA	22	True	AATAAA	-19	NA	103902012	104003186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.6	chr5	+	8472	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGGCTTTTATTT	NA	False	NA	26	True	AATAAA	-23	NA	103840194	104003190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.60	chr5	+	7324	21	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	14	-481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	103.634586408206	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103902041	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995722_103997215_103997443_103998567_104001859_104002366
ES.26498.61	chr5	+	4362	20	FSM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	-124	4074	-115	-4074	multi-exon	FALSE	canonical	1	2	junction_1	69.9361006329718	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTTTGTTTTCTTTTC	NA	False	NA	NA	False	TTTAAA	-28	NA	103902314	103999114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_103902612_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.62	chr5	+	8360	20	NNC	ENSMUSG00000029313.19	novel	8312	20	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	92.4873877753444	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGAGCCTGTGGCTTT	NA	False	NA	21	True	AATAAA	-18	NA	103902386	104003185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103902612_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995717_103997215_103997443_103998567
ES.26498.66	chr5	+	7164	17	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	26702	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	76.0763391272214	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGAGCCTGTGGCTTTT	NA	False	NA	22	True	AATAAA	-19	NA	103958926	104003186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995722_103997215_103997443_103998567
ES.26498.67	chr5	+	6587	18	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	26702	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	74.1909534771907	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103958926	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001801_104002369
ES.26498.68	chr5	+	6679	10	ISM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	78895	6	49109	-6	3prime_fragment	FALSE	canonical	3	249	junction_2	26.2466929133727	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	False	NA	18	True	AATAAA	-15	NA	103981333	104003182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.7	chr5	+	6811	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	-19	-1633	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGCTGTGGCTTTGAG	NA	False	NA	NA	False	CATAAA	-19	NA	103840220	104001555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.71	chr5	+	5348	7	ISM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	88413	8	58627	-8	3prime_fragment	FALSE	canonical	3	290	junction_1	18.6993761036743	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAGTTGAGCCTGTG	7918	False	NA	16	True	AATAAA	-13	NA	103990851	104003180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.72	chr5	+	4881	7	ISM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	88413	475	58627	-475	3prime_fragment	FALSE	canonical	3	290	junction_1	18.6993761036743	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGTTGTCAAGGTGAT	7918	False	NA	NA	False	ATTAAA	-15	NA	103990851	104002713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ES.26498.74	chr5	+	4689	6	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	61874	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	163.806715369059	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTGTGGCTTTTA	NA	False	NA	23	True	AATAAA	-20	NA	103994098	104003187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103994234_103994901_103994974_103995579_103995722_103997215_103997443_103998567_104001863_104002369
ES.26498.75	chr5	+	4551	5	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	62675	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	139.612633740647	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAGTTGAGCCTGTG	NA	False	NA	16	True	AATAAA	-13	NA	103994899	104003180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103994974_103995579_103995718_103997215_103997443_103998567_104001869_104002369
ES.26498.77	chr5	+	4339	3	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	64989	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTGAGCCTGTGGCT	NA	False	NA	19	True	AATAAA	-16	NA	103997213	104003183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103997443_103998567_104001863_104002368
ES.26498.78	chr5	+	4845	2	ISM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	94775	5	64989	-5	3prime_fragment	FALSE	canonical	3	340	junction_1	0	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTGAGCCTGTGGCT	NA	False	NA	19	True	AATAAA	-16	NA	103997213	104003183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_103997443_103998567
ES.26498.79	chr5	+	4612	3	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	65086	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	170	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAGTTGAGCCTGTG	NA	False	NA	16	True	AATAAA	-13	NA	103997310	104003180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103997443_103998567_104001381_104001513
ES.26498.8	chr5	+	7871	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	67.1788488471357	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGTGGCTTTTAT	NA	False	NA	24	True	AATAAA	-21	NA	103840227	104003188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001804_104002369
ES.26498.80	chr5	+	4709	1	Genic_Genomic	ENSMUSG00000029313.19	novel	NA	NA	NA	NA	66259	4	mono-exon	FALSE	NA	NA	NA	NA	NA	609	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGGCTTTTATTTTG	NA	False	NA	28	True	AATAAA	-25	NA	103998483	104003192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_103998500_104003200
ES.26498.81	chr5	+	3635	2	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	66341	-481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103998565	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104001863_104002369
ES.26498.83	chr5	+	2924	2	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	67471	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTGTGGCTTTTA	NA	False	NA	23	True	AATAAA	-20	NA	103999695	104003187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104001802_104002369
ES.26498.84	chr5	+	2469	2	NNC	ENSMUSG00000029313.19	novel	8323	20	NA	NA	67514	-481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGTATGTTGTCAA	NA	False	NA	NA	False	ATTAAA	-9	NA	103999738	104002707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104001870_104002369
ES.26498.9	chr5	+	7930	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	67.1788488471357	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGAGCCTGTGGCTTTT	NA	False	NA	22	True	AATAAA	-19	NA	103840232	104003186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001870_104002369
ES.26499.1	chr5	-	2352	3	Antisense	novelGene_ENSMUSG00000029313.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTATTTTCCATGGATT	NA	False	NA	NA	False	ATTAAA	-18	NA	103841231	103838537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_103840743_103840902_103840996_103841177
ES.265.1	chr1	-	4893	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36100593	36095700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36095700_36100600
ES.265.2	chr1	-	3288	3	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTATTTATATCACAT	NA	False	NA	NA	False	NA	NA	NA	36104153	36096876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36099392_36099940_36100026_36103465
ES.265.3	chr1	-	2137	2	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACAGCTGCAGAGATTG	NA	False	NA	NA	False	NA	NA	NA	36100020	36097313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36099371_36099940
ES.265.4	chr1	-	2066	2	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAGATGGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	36100019	36097404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36099392_36099940
ES.2650.1	chr10	-	3576	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	-39	-3	-39	3	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGTTCATTGTGTCC	NA	False	NA	0	True	AATAAA	-22	NA	40759346	40707613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ES.2650.2	chr10	-	3246	14	NIC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	57.9768368356489	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGTTCATTGTGTCC	NA	False	NA	0	True	AATAAA	-22	NA	40759103	40707613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40758882
ES.2650.3	chr10	-	4563	14	NIC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	-4	1	intron_retention	FALSE	canonical	3	163	junction_9	15.3414779843913	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGAGTTCATTGTGT	NA	False	NA	-2	True	AATAAA	-20	NA	40759109	40707615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ES.2650.4	chr10	-	4709	4	NIC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	2441	1	intron_retention	FALSE	canonical	3	189	junction_1	7.11805216802087	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGAGTTCATTGTGT	NA	False	NA	-2	True	AATAAA	-20	NA	40719492	40707615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40710317_40712283_40712361_40717349_40717484_40717695
ES.2650.5	chr10	-	5887	10	NIC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	-6595	0	intron_retention	FALSE	canonical	3	163	junction_8	17.7770833197694	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	40728528	40707616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492
ES.2650.6	chr10	-	6308	2	NIC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	6039	-3	intron_retention	FALSE	canonical	3	189	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCTGCTGAGTTCATT	NA	False	NA	-6	True	AATAAA	-16	NA	40715894	40707619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_40710317_40712283
ES.2650.7	chr10	-	3207	15	NNC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.1208021419657	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGTGCTGCTGAGTT	NA	False	NA	-10	True	AATAAA	-12	NA	40759118	40707623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717746_40719102_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ES.2650.8	chr10	-	3058	14	NNC	ENSMUSG00000038446.9	novel	3534	15	NA	NA	1	-1477	intron_retention	FALSE	non_canonical	0	0	junction_1	55.9166751176518	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTGATTTATAGGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	40759087	40709093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_40709348_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ES.26500.1	chr5	-	320	1	Intergenic	novelGene_22011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAATAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	103852941	103852621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103852600_103852900
ES.26501.1	chr5	-	172	1	Intergenic	novelGene_22012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCTGAACTGGATA	NA	False	NA	NA	False	NA	NA	NA	103858657	103858485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103858500_103858700
ES.26502.1	chr5	-	2389	1	Intergenic	novelGene_22015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103898932	103896543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103896500_103898900
ES.26503.1	chr5	-	173	1	Intergenic	novelGene_22016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATCAATTACTG	NA	False	NA	NA	False	NA	NA	NA	103942626	103942453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_103942500_103942600
ES.26504.1	chr5	-	5090	7	Antisense	novelGene_ENSMUSG00000029313.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTCAACGAGTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	103992811	103972297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_103973901_103974008_103974044_103976210_103976375_103981333_103982324_103988919_103989016_103990089_103990332_103990851
ES.26504.2	chr5	-	3860	9	Antisense	novelGene_ENSMUSG00000029313.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103995241	103972318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_103974044_103976210_103976375_103981333_103982323_103988919_103989020_103990089_103990332_103990851_103990952_103991070_103991133_103994097_103994241_103994906
ES.26505.1	chr5	-	3191	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	-11	13	-11	-13	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGTCTTTTCATTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	104059136	104009928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ES.26505.10	chr5	-	3011	9	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	78	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	52.7938206611342	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059047	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104022068_104022256_104023606_104024156_104033772_104034154_104058919
ES.26505.11	chr5	-	3078	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	38.7741163505428	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059126	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104059075
ES.26505.12	chr5	-	2592	9	NIC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	33	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	41.5353764880012	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059092	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104033772_104034157_104058981
ES.26505.15	chr5	-	3005	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.8543405864374	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAAACTACTAG	NA	False	NA	NA	False	AATAAA	-20	NA	104059124	104009941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104023928_104033772_104034157_104038580_104038648_104058981
ES.26505.16	chr5	-	3166	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	36	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.7386702573617	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAAACTACTAG	NA	False	NA	NA	False	AATAAA	-20	NA	104059089	104009941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104027489_104027528_104033772_104034154_104058981
ES.26505.17	chr5	-	2938	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	59	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.6855409938613	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGGAAACTACT	NA	False	NA	NA	False	AATAAA	-18	NA	104059066	104009943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104010616_104010783_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ES.26505.18	chr5	-	3066	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.6849430040639	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGGAAACTACT	NA	False	NA	NA	False	AATAAA	-18	NA	104059130	104009943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019903_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104059075
ES.26505.19	chr5	-	3040	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	37.1128010260611	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGGAAACTACT	NA	False	NA	NA	False	AATAAA	-18	NA	104059098	104009943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012132_104012229_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ES.26505.21	chr5	-	3327	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	57	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.0566332570229	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAGAAAAAAATGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	104059068	104009949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104058823
ES.26505.23	chr5	-	3132	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.0566332570229	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAGAAAAAAATGGAA	NA	False	NA	NA	False	AATAAA	-12	NA	104059125	104009949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104059075
ES.26505.24	chr5	-	2535	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTATTCTTTTTCCTGAA	NA	False	NA	-2	True	AATAAA	-19	NA	104059126	104010636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058919
ES.26505.26	chr5	-	2471	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	0	722	0	-692	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTATTCTTTTTCCTGA	NA	False	NA	-3	True	AATAAA	-18	NA	104059125	104010637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ES.26505.27	chr5	-	2504	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	17	-692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	50.71732360427	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTATTCTTTTTCCTGA	NA	False	NA	-3	True	AATAAA	-18	NA	104059108	104010637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020029_104022068_104022256_104023606_104024156_104033772_104034157_104058919
ES.26505.29	chr5	-	2552	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	73	-696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCATCTATTCTTTTTC	NA	False	NA	-7	True	AATAAA	-14	NA	104059052	104010641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058823
ES.26505.3	chr5	-	3246	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-1	15	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	46.2520269826091	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTAGTCTTTTCATTG	NA	False	NA	NA	False	AATAAA	-31	NA	104059126	104009930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104058981
ES.26505.30	chr5	-	2532	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	1	-697	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	46.2520269826091	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCATCTATTCTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	104059124	104010642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104058981
ES.26505.31	chr5	-	172	1	Intergenic	novelGene_22017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATAATTTGGGG	7067	False	NA	NA	False	NA	NA	NA	104011365	104011193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104011200_104011400
ES.26505.32	chr5	-	3564	1	FSM	ENSMUSG00000105019.2	ENSMUST00000197729.2	328	1	-3235	-1	-3235	1	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTCGATTTTTAAGCC	NA	False	NA	NA	False	NA	NA	NA	104031336	104027772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104027800_104031300
ES.26505.4	chr5	-	3244	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	-8	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059133	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058919
ES.26505.5	chr5	-	4548	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	37	11	intron_retention	FALSE	canonical	0	0	junction_9	51.8244901352418	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059088	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012132_104012229_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104024156_104033772_104034157_104058823
ES.26505.6	chr5	-	3295	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	37	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.6851808644853	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059088	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058823
ES.26505.7	chr5	-	3216	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	84	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.5838683444525	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTACTAGTCTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	104059041	104009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104038580_104038648_104058919
ES.26506.1	chr5	-	172	1	Intergenic	novelGene_22018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	9351	False	NA	NA	False	NA	NA	NA	104063564	104063392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104063400_104063600
ES.26507.1	chr5	+	194	1	Intergenic	novelGene_22019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGGGTTAACAATGTAC	NA	False	NA	22	True	NA	NA	NA	104068133	104068327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104068100_104068300
ES.26508.1	chr5	-	165	1	ISM	ENSMUSG00000029311.17	ENSMUST00000031251.16	1825	7	31982	11	31901	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTATCTGTCTCTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	104137803	104137638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_104137600_104137800
ES.26509.1	chr5	+	177	1	Intergenic	novelGene_22020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATATGAGT	NA	False	NA	NA	False	NA	NA	NA	104158913	104159090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104158900_104159100
ES.2651.1	chr10	+	2660	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	-52	1	-52	-1	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	16	True	AATAAA	-18	NA	40759418	40814564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ES.2651.11	chr10	+	2523	8	NNC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.7969964812722	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTGTCGCTCTTCGA	NA	False	NA	16	True	AATAAA	-18	NA	40759826	40814564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40760038_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ES.2651.12	chr10	+	2700	9	NNC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	33	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.4144143860485	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCTTGGGTGTCGCTCT	NA	False	NA	12	True	AATAAA	-14	NA	40759855	40814560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813621
ES.2651.14	chr10	+	4829	1	Intergenic	novelGene_2018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTAAAGGATTTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	40781341	40786170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40781300_40786200
ES.2651.2	chr10	+	2136	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	25	448	25	-448	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTAGAGTAGCAGATTC	NA	False	NA	NA	False	AATAAA	-27	NA	40759495	40814117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ES.2651.4	chr10	+	3459	8	ISM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	55	2	55	-2	intron_retention	FALSE	canonical	3	17	junction_1	87.006919734195	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGGTGTCGCTCTTCG	NA	False	NA	15	True	AATAAA	-17	NA	40759525	40814563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105
ES.2651.5	chr10	+	2964	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	-246	1	106	0	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759576	40814565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ES.2651.6	chr10	+	3948	8	NIC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	-39	0	intron_retention	FALSE	canonical	3	202	junction_5	34.73103652296	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759783	40814565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40810653_40812105_40812735_40813641
ES.2651.9	chr10	+	3184	2	NNC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	1	-50746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTTGTGCTTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	40759823	40763819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_40762609_40763420
ES.26510.1	chr5	-	1181	7	FSM	ENSMUSG00000029311.17	ENSMUST00000031251.16	1825	7	-16	660	-16	-660	multi-exon	FALSE	canonical	0	0	junction_2	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTGTATCTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	104169801	104138287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104138461_104140683_104140801_104151037_104151176_104156444_104156552_104157660_104157793_104166039_104166148_104169395
ES.26510.2	chr5	-	2347	5	FSM	ENSMUSG00000029311.17	ENSMUST00000119025.2	2234	5	-108	-5	-27	5	multi-exon	FALSE	canonical	2	2	junction_3	2.54950975679639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTCGA	NA	False	NA	NA	False	AATAAA	-16	NA	104169812	104149592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104151176_104156444_104156552_104157660_104157793_104166039_104166148_104169395
ES.26511.1	chr5	+	196	1	Intergenic	novelGene_22021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTTC	1603	False	NA	NA	False	NA	NA	NA	104172290	104172486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104172300_104172500
ES.26512.1	chr5	+	4049	7	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	-6	-10	intron_retention	FALSE	canonical	3	64	junction_1	105.95544136832	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGACTTGTGTTTC	NA	False	NA	10	True	AATAAA	-13	NA	104194385	104213235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.11	chr5	+	1200	7	ISM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	3707	12	2955	-12	3prime_fragment	FALSE	canonical	3	335	junction_1	7.99305253885453	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104198441	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.12	chr5	+	5676	4	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	4472	-12	intron_retention	FALSE	canonical	3	340	junction_1	7.58653778449403	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104199958	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104203443_104205972_104207649_104209539_104209625_104212802
ES.26512.13	chr5	+	5173	3	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	7505	-12	intron_retention	FALSE	canonical	3	355	junction_1	1	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	375	False	NA	8	True	AATAAA	-11	NA	104202991	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104207649_104209539_104209625_104212802
ES.26512.2	chr5	+	1482	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	29	-12	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104194420	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.3	chr5	+	1048	6	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	-64	-13	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	156.930048110615	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCTGGTGACTTGTGT	NA	False	NA	7	True	AATAAA	-10	NA	104194670	104213232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104194705_104198443_104198684_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.4	chr5	+	1514	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	-38	12	-38	-12	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104194696	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.5	chr5	+	1219	8	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	-10	-12	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	118.273808924677	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104194724	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104194746_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.6	chr5	+	2057	8	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	119.670806969855	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACTTGTGTTTCAAGT	NA	False	NA	14	True	AATAAA	-17	NA	104194743	104213239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104195597_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.7	chr5	+	1346	7	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	18	-12	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	125.943108849459	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104194752	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104207501_104207649_104209539_104209625_104212802
ES.26512.8	chr5	+	1320	7	NIC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	-39	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	128.340259553354	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGGTGACTTGTGTT	NA	False	NA	8	True	AATAAA	-11	NA	104194794	104213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104195013_104198443_104198684_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ES.26512.9	chr5	+	930	5	NNC	ENSMUSG00000029310.14	novel	1488	8	NA	NA	-37	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.262225465558	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAAAACCCAATT	NA	False	NA	-8	True	TTTAAA	-32	NA	104194796	104213217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104195013_104198443_104198589_104207579_104207649_104209539_104209625_104212802
ES.26513.1	chr5	-	1265	1	FSM	ENSMUSG00000106035.2	ENSMUST00000196765.2	2779	1	585	929	585	-929	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGTATCCTCAAACAGG	NA	False	NA	NA	False	NA	NA	NA	104194678	104193413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104193400_104194700
ES.26514.1	chr5	+	3402	2	NNC	ENSMUSG00000097877.3	novel	2864	3	NA	NA	-3883	2367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATCATCAAGCAGTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	104253199	104261159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104253318_104257875
ES.26515.1	chr5	-	2662	11	FSM	ENSMUSG00000029309.8	ENSMUST00000031249.8	2759	11	100	-3	100	3	multi-exon	FALSE	canonical	1	1	junction_2	1.113552872566	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCTCAAGATTATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	104261499	104226973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104227444_104232875_104233025_104233572_104233722_104234887_104235025_104236262_104236384_104237465_104237585_104238257_104238328_104240243_104241240_104242504_104242634_104245574_104245640_104261242
ES.26516.1	chr5	-	194	1	Antisense	novelGene_ENSMUSG00000097877.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTTCAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	104267185	104266991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104267000_104267200
ES.26517.1	chr5	-	176	1	Intergenic	novelGene_22022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAACCAATGGA	NA	False	NA	NA	False	NA	NA	NA	104294498	104294322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104294300_104294500
ES.26518.1	chr5	+	1687	2	NNC	ENSMUSG00000053863.4	novel	1682	3	NA	NA	9381	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGTGTAATTACATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	104482575	104486480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104482722_104484939
ES.26519.1	chr5	+	2076	8	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	-951	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2158.63050878778	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGGTGTCAATTATT	NA	False	NA	34	True	AATAAA	-21	NA	104582032	104588919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104582574_104582861_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.10	chr5	+	1548	6	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	-39	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2525.174085088	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582944	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584443_104585517_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.11	chr5	+	1484	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	-27	-1	-24	0	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582959	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.12	chr5	+	1340	8	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2159.66895611341	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582985	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094_104588705_104588770
ES.26519.14	chr5	+	2483	6	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5956	junction_2	211.095807632459	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582986	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584309_104584406_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.15	chr5	+	1728	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	3	-321	0	321	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTGTCTGTCTTCTA	NA	False	NA	NA	False	AGTAAA	-25	NA	104582986	104589237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.17	chr5	+	5146	3	NIC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	5956	junction_1	266.5	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGTCTGGTGGTGTC	NA	False	NA	27	True	AATAAA	-14	NA	104582986	104588912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584309_104584406_104587413_104588094
ES.26519.19	chr5	+	1411	7	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2330.28713657542	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582986	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584309_104584406_104584449_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.21	chr5	+	4249	3	NIC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6058	junction_1	215.5	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582986	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104586134_104587130_104587413_104588094
ES.26519.23	chr5	+	4259	4	ISM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	-1069	-4	2	0	intron_retention	FALSE	canonical	3	5474	junction_2	301.6502757978	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582988	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091
ES.26519.24	chr5	+	2400	6	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5474	junction_3	373.679862984347	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104587413_104588094
ES.26519.26	chr5	+	1395	6	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2525.174085088	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584337_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.27	chr5	+	1217	8	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2159.66895611341	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094_104588711_104588896
ES.26519.3	chr5	+	1628	8	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	-821	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2815.97904821751	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTGTCAATTATTC	NA	False	NA	35	True	AATAAA	-22	NA	104582162	104588920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104582252_104582861_104583063_104584240_104584309_104584406_104584443_104585517_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.30	chr5	+	1893	6	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5474	junction_3	371.499878869428	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104586134_104587130_104587413_104588094
ES.26519.33	chr5	+	3162	5	NIC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	5956	junction_2	186.989304506969	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582988	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584309_104584406_104585602_104586091_104586134_104587130
ES.26519.34	chr5	+	4341	4	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5956	junction_1	100.057761096057	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584309_104584406_104585602_104586091_104586134_104587130
ES.26519.35	chr5	+	1408	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2266.00718347395	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582988	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588088
ES.26519.36	chr5	+	2971	5	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5956	junction_2	235.35863591549	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584309_104584406_104586134_104587130_104587413_104588094
ES.26519.37	chr5	+	2183	5	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5474	junction_2	359.689796908392	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104583063_104584240_104584443_104585520_104585602_104586091_104586134_104587130
ES.26519.38	chr5	+	3756	4	NIC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	6058	junction_2	179.33395291095	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582988	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.39	chr5	+	1350	8	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2820.707358093	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585517_104585602_104586091_104586134_104587130_104587413_104588094_104588538_104588593
ES.26519.40	chr5	+	4148	4	NIC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	5956	junction_1	231.001202498073	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582988	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584309_104584406_104586134_104587130_104587413_104588094
ES.26519.42	chr5	+	1399	7	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2973.55569516063	1303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584240_104584302_104584406_104584443_104585517_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.43	chr5	+	1259	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	5	146	2	-139	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAGCAAATTTACTGAA	NA	False	NA	-89	True	AATAAA	-11	NA	104582988	104588770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.45	chr5	+	2679	5	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5474	junction_1	369.780593730931	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.48	chr5	+	3659	5	NIC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	5956	junction_1	200.542233706519	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582988	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584309_104584406_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.5	chr5	+	1703	8	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	-811	-4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	2731.57610181375	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	False	NA	20	True	AATAAA	-7	NA	104582172	104588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104582252_104582861_104583063_104584137_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.50	chr5	+	5825	2	ISM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	-1069	-2	2	2	intron_retention	FALSE	canonical	3	5956	junction_1	0	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGGAGTCTGGTGGTGT	NA	False	NA	26	True	AATAAA	-13	NA	104582988	104588911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104584309_104584406
ES.26519.53	chr5	+	4838	2	NIC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	54	-1	intron_retention	FALSE	canonical	3	6058	junction_1	0	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGTCTGGTGGTGTC	NA	False	NA	27	True	AATAAA	-14	NA	104583077	104588912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104586134_104587130
ES.26519.54	chr5	+	3570	3	NIC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	240	-1	intron_retention	FALSE	canonical	3	5474	junction_1	292	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTAAGGAGTCTGGTGG	NA	False	NA	23	True	AATAAA	-10	NA	104583263	104588908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104584443_104585520_104586134_104587130
ES.26519.55	chr5	+	1345	5	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	799	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2710.34973527403	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAGGAGTCTGGTGGT	NA	False	NA	24	True	AATAAA	-11	NA	104584856	104588909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104584982_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.6	chr5	+	3372	6	FSM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	-1860	-5	-786	0	multi-exon	FALSE	canonical	3	5474	junction_2	333.11595578717	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582197	104588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.7	chr5	+	2108	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	-701	3	-701	0	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582282	104588913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.8	chr5	+	1985	7	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	-480	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2910.94198194025	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	False	NA	20	True	AATAAA	-7	NA	104582503	104588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104583063_104584137_104584309_104584406_104584443_104585517_104585602_104586091_104586134_104587130_104587413_104588094
ES.26519.9	chr5	+	1635	8	NNC	ENSMUSG00000029304.15	novel	1411	8	NA	NA	-393	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2159.66895611341	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	False	NA	20	True	AATAAA	-7	NA	104582590	104588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104582705_104582861_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ES.2652.1	chr10	+	4131	1	Intergenic	novelGene_2019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGATGCACATTTATT	NA	False	NA	NA	False	NA	NA	NA	40827059	40831190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40827100_40831200
ES.26520.1	chr5	+	5347	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	-118	-10	-118	10	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGTTTGTTTCCAT	NA	False	NA	19	True	AATAAA	-25	NA	104607197	104653695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.10	chr5	+	5092	15	NNC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	20.879269085651	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	NA	False	NA	8	True	AATAAA	-14	NA	104607430	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646418_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.12	chr5	+	10471	13	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-5	10	intron_retention	FALSE	canonical	3	58	junction_12	9.95406114775941	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACGTTTGTTTCCAT	NA	False	NA	19	True	AATAAA	-25	NA	104607430	104653695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.13	chr5	+	1419	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-4	-22004	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	104607431	104616182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104608092_104614748_104614863_104615537
ES.26520.14	chr5	+	1869	6	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	-3	6810	-3	-6810	5prime_fragment	FALSE	canonical	3	61	junction_1	8.79545337091841	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTTTATTCTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	104607432	104631376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
ES.26520.15	chr5	+	5052	15	NNC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.6911200513552	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTGTTAAAAACACGTT	NA	False	NA	10	True	AATAAA	-16	NA	104607468	104653686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628030_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.16	chr5	+	6412	5	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	2415	6506	2415	-6506	internal_fragment	FALSE	canonical	3	80	junction_1	2.91547594742265	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAACAAAC	437	False	NA	NA	False	NA	NA	NA	104609850	104631680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
ES.26520.17	chr5	+	4173	1	Intergenic	novelGene_22024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGTTTCTCTGTGTAG	972	False	NA	NA	False	NA	NA	NA	104610385	104614558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104610400_104614600
ES.26520.18	chr5	+	4691	15	NNC	ENSMUSG00000034462.10	novel	5130	2	NA	NA	5512	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6642589723599	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	3534	False	NA	8	True	AATAAA	-14	NA	104612947	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104613319_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104630998_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.19	chr5	+	4457	15	NNC	ENSMUSG00000034462.10	novel	5130	2	NA	NA	6808	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2165703435512	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	4830	False	NA	7	True	AATAAA	-13	NA	104614243	104653683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104614260_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.2	chr5	+	5172	15	NNC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-76	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.1554016839237	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	NA	False	NA	8	True	AATAAA	-14	NA	104607239	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104630998_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.20	chr5	+	4554	14	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	7321	1	7201	-1	3prime_fragment	FALSE	canonical	3	58	junction_13	9.50614874201564	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	5223	False	NA	8	True	AATAAA	-14	NA	104614636	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.21	chr5	+	4375	13	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	7212	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	20.9018872087878	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	5234	False	NA	8	True	AATAAA	-14	NA	104614647	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.22	chr5	+	1229	5	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	7294	6810	7294	-6810	internal_fragment	FALSE	canonical	3	80	junction_1	2.91547594742265	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTTTATTCTTGTTAT	5316	False	NA	NA	False	NA	NA	NA	104614729	104631376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
ES.26520.23	chr5	+	4519	13	NNC	ENSMUSG00000034462.10	novel	5130	2	NA	NA	7443	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.3078316607495	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGTGTTAAAAACACG	5465	False	NA	8	True	AATAAA	-14	NA	104614878	104653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104615238_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.25	chr5	+	3551	9	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-9748	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	23.5531314266278	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	NA	False	NA	7	True	AATAAA	-13	NA	104630888	104653683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.26	chr5	+	7516	2	FSM	ENSMUSG00000034462.10	ENSMUST00000133540.2	5130	2	-1545	-841	-1545	841	multi-exon	FALSE	canonical	3	80	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGGAGGAGCTAT	NA	False	NA	NA	False	NA	NA	NA	104639091	104650056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104642858_104646306
ES.26520.27	chr5	+	2486	4	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	39406	214	6085	-214	3prime_fragment	FALSE	canonical	3	58	junction_3	9.93310961716756	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTGTAGAATTCTCC	NA	False	NA	NA	False	NA	NA	NA	104646721	104653471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.28	chr5	+	3559	3	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	39724	-883	6403	883	3prime_fragment	FALSE	canonical	3	58	junction_2	10	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGCCTGGTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	104647039	104654568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104647200_104650157_104650306_104651317
ES.26520.29	chr5	+	3568	2	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	39842	2	6521	-2	intron_retention	FALSE	canonical	3	78	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	NA	False	NA	7	True	AATAAA	-13	NA	104647157	104653683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104647200_104650157
ES.26520.3	chr5	+	4958	14	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-29	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	20.2464110341392	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	NA	False	NA	7	True	AATAAA	-13	NA	104607406	104653683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.4	chr5	+	1578	3	NNC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-27	-21868	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	29	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAAGAAACCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	104607408	104616318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104608092_104614748_104614863_104615537
ES.26520.5	chr5	+	6061	7	NIC	ENSMUSG00000034462.10	novel	2282	9	NA	NA	-16	3348	intron_retention	FALSE	canonical	3	7	junction_6	27.5801861245835	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTGTATTATACTATA	NA	False	NA	NA	False	NA	NA	NA	104607419	104641534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098
ES.26520.6	chr5	+	2215	6	ISM	ENSMUSG00000034462.10	ENSMUST00000130931.2	2282	9	-15	6476	-15	-6476	5prime_fragment	FALSE	canonical	3	61	junction_1	8.79545337091841	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTAGGATGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	104607420	104631710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890
ES.26520.7	chr5	+	6341	14	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	58	junction_13	10.1270041482045	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGGTGTTAAAAACAC	NA	False	NA	7	True	AATAAA	-13	NA	104607420	104653683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ES.26520.8	chr5	+	2718	1	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-15	-28048	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCTGGCTTGTGGGA	NA	False	NA	NA	False	AATAAA	-13	NA	104607420	104610138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104607400_104610100
ES.26520.9	chr5	+	5850	1	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	-9	-24910	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTCAATGAGTAAACATT	NA	False	NA	NA	False	ATTAAA	-16	NA	104607426	104613276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104607400_104613300
ES.26521.1	chr5	-	4758	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGGTTGGAAAAAAATCAA	NA	False	NA	NA	False	AATAAA	-18	NA	104608207	104603449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104603400_104608200
ES.26521.2	chr5	-	1017	2	Intergenic	novelGene_22023	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGGTTGGAAAAAAATCAA	NA	False	NA	NA	False	AATAAA	-18	NA	104604894	104603449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104604275_104604702
ES.26521.3	chr5	-	4546	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTTCCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	104608201	104603655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104603700_104608200
ES.26521.4	chr5	-	3793	2	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAGCTTGACGATGTGT	NA	False	NA	NA	False	NA	NA	NA	104608164	104603943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104604275_104604702
ES.26521.5	chr5	-	4245	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTCTTTGTTCATCT	NA	False	NA	NA	False	AATGAA	-28	NA	104608210	104603965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104604000_104608200
ES.26521.6	chr5	-	2126	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTGACCTTTTCCGAG	NA	False	NA	NA	False	NA	NA	NA	104608315	104606189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104606200_104608300
ES.26521.7	chr5	-	1933	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAAGTGGTAATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	104608264	104606331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104606300_104608300
ES.26522.1	chr5	-	1389	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTGGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	104614860	104613471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_104613500_104614900
ES.26522.2	chr5	-	135	1	Intergenic	novelGene_22025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104614689	104614554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104614600_104614700
ES.26523.1	chr5	+	608	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	-2	4575	0	-4575	multi-exon	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGCCTCAAATGTTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	104656215	104665674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104656438_104665288
ES.26523.10	chr5	+	9397	8	FSM	ENSMUSG00000097392.5	ENSMUST00000239420.2	9445	8	51	-3	49	3	multi-exon	FALSE	canonical	1	3	junction_4	5.06287004190553	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGTTCTTTTTTTTTT	NA	False	NA	7	True	AATAAA	-23	NA	104656266	104702076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.11	chr5	+	8449	6	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-4088	0	intron_retention	FALSE	canonical	3	8	junction_1	4.2614551505325	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	5112	False	NA	4	True	AATAAA	-20	NA	104667454	104702073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104670591_104671982_104672015_104672124_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.12	chr5	+	5263	7	NNC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-3119	-685	intron_retention	FALSE	canonical	0	0	junction_3	6.27162924074226	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAAGAGCAGTAGCTGA	6081	False	NA	NA	False	NA	NA	NA	104668423	104701388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104670591_104671982_104672015_104672124_104672163_104673694_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.13	chr5	+	5830	6	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-3016	0	intron_retention	FALSE	canonical	0	0	junction_3	5.2687759489278	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	6184	False	NA	4	True	AATAAA	-20	NA	104668526	104702073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104670591_104671982_104672015_104672124_104672292_104686691_104686840_104689031_104689129_104698751
ES.26523.14	chr5	+	3612	4	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-2452	1289	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.80656320908194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCTACCTTGAATGCT	6748	False	NA	NA	False	NA	NA	NA	104669090	104688481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104670591_104672124_104672292_104673683_104673839_104686691
ES.26523.15	chr5	+	4457	8	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-1404	4	intron_retention	FALSE	canonical	1	1	junction_6	6.23354977979184	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTTCTTTTTTTTTTT	7796	False	NA	8	True	AATAAA	-24	NA	104670138	104702077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104698510_104698591_104698751
ES.26523.16	chr5	+	3937	4	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	-1353	1289	intron_retention	FALSE	canonical	3	8	junction_1	5.09901951359278	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCTACCTTGAATGCT	7847	False	NA	NA	False	NA	NA	NA	104670189	104688481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104670591_104671982_104672015_104672124_104673839_104686691
ES.26523.17	chr5	+	5175	4	Fusion	ENSMUSG00000097392.5_ENSMUSG00000118625.2	novel	475	4	NA	NA	-5468	-2	intron_retention	FALSE	canonical	0	0	junction_1	6.68331255192114	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACAGCTTGGTTCTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	104682968	104702071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_104684579_104686691_104686840_104689031_104689129_104698751
ES.26523.18	chr5	+	5077	3	ISM	ENSMUSG00000097392.5	ENSMUST00000181620.3	3805	4	11584	-3	-3252	3	3prime_fragment	FALSE	canonical	3	11	junction_1	2.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGTTCTTTTTTTTTT	NA	False	NA	7	True	AATAAA	-23	NA	104685184	104702076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104686840_104689031_104689129_104698751
ES.26523.19	chr5	+	181	1	Intergenic	novelGene_22026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	104688125	104688306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104688100_104688300
ES.26523.2	chr5	+	7049	8	ISM	ENSMUSG00000097392.5	ENSMUST00000239307.3	9550	9	1	3695	1	-969	5prime_fragment	FALSE	canonical	0	0	junction_7	6.1145527311522	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATAAATGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	104656216	104698378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104697451
ES.26523.20	chr5	+	180	2	Intergenic	novelGene_22027	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	428	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	104688127	104725313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104688184_104725189
ES.26523.21	chr5	+	4802	1	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	7538	-685	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAAGAGCAGTAGCTGA	NA	False	NA	NA	False	NA	NA	NA	104696586	104701388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104696600_104701400
ES.26523.22	chr5	+	5019	1	NIC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	8006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	NA	False	NA	4	True	AATAAA	-20	NA	104697054	104702073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_104697100_104702100
ES.26523.23	chr5	+	2774	4	Intergenic	novelGene_22028	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_1	10.4243305140746	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGTGTGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104719519	104732485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104719638_104728353_104728481_104728722_104728784_104730017
ES.26523.24	chr5	+	7853	4	Intergenic	novelGene_22029	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_3	16.5730705262081	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTTTGAATCGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	104719536	104792968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104719638_104783724_104783852_104784093_104784155_104785404
ES.26523.25	chr5	+	750	4	Intergenic	novelGene_22030	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	42.4970587217516	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTTTGTCAGGCATTG	NA	False	NA	NA	False	NA	NA	NA	104719561	104739010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104719638_104728353_104728481_104737770_104737851_104738543
ES.26523.26	chr5	+	5142	1	Intergenic	novelGene_22031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	104721862	104727004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104721900_104727000
ES.26523.27	chr5	+	185	1	Intergenic	novelGene_22032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	104725131	104725316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104725100_104725300
ES.26523.28	chr5	+	3039	4	Intergenic	novelGene_22033	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATAACTTTACTTTCTCC	NA	False	NA	NA	False	AATAAA	-25	NA	104731024	104792847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104731279_104787491_104788020_104789954_104790441_104791076
ES.26523.29	chr5	+	5151	1	Intergenic	novelGene_22034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGATTGGATCTGG	NA	False	NA	NA	False	NA	NA	NA	104733208	104738359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104733200_104738400
ES.26523.3	chr5	+	4260	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	-1	922	1	-922	multi-exon	FALSE	canonical	3	13	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCAGCTGTTACTCCAG	NA	False	NA	NA	False	NA	NA	NA	104656216	104669327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104656438_104665288
ES.26523.30	chr5	+	827	1	Intergenic	novelGene_22035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTTTCTATAACC	NA	False	NA	NA	False	NA	NA	NA	104747076	104747903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104747100_104747900
ES.26523.31	chr5	+	3480	5	Intergenic	novelGene_22036	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	22.2598292895521	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104757254	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104836648_104836776_104837017_104837079_104896979_104897892_104898143
ES.26523.32	chr5	+	3482	5	Intergenic	novelGene_22037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	38.5640700652823	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGTTGAATTACA	NA	False	NA	NA	False	AATAAA	-18	NA	104757254	104900355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104836648_104836776_104895405_104895467_104896979_104897892_104898143
ES.26523.33	chr5	+	3535	6	Intergenic	novelGene_22038	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	43.4538836008935	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGTGTTCGTTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	104757264	104900351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104888834_104888902_104895041_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.34	chr5	+	3456	5	Intergenic	novelGene_22039	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	38.5640700652823	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104757279	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104836648_104836776_104895405_104895467_104896979_104897909_104898159
ES.26523.35	chr5	+	7888	4	Intergenic	novelGene_22040	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_3	16.1314048434171	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTTTGAATCGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	104757288	104792968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104783724_104783852_104784093_104784155_104785404
ES.26523.38	chr5	+	3581	6	Intergenic	novelGene_22041	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	43.3063505735591	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104757301	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104879694_104879844_104895041_104895169_104895405_104895467_104896979_104897887_104898139
ES.26523.4	chr5	+	9313	8	NNC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	4	3	intron_retention	FALSE	canonical	2	7	junction_4	4.19912527334259	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGTTCTTTTTTTTTT	NA	False	NA	7	True	AATAAA	-23	NA	104656221	104702076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104672163_104673683_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.41	chr5	+	6665	5	Intergenic	novelGene_22042	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_4	18.9786063766547	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTAGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	104757314	104844695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104757425_104783724_104783852_104784093_104784155_104785404_104788179_104841102
ES.26523.42	chr5	+	4131	3	Intergenic	novelGene_22043	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	7	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGTCTCTATTGTT	NA	False	NA	NA	False	NA	NA	NA	104782829	104788452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104783852_104784093_104784155_104785404
ES.26523.43	chr5	+	2706	3	Intergenic	novelGene_22044	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCGATGACAAGAAATC	NA	False	NA	NA	False	AATAAA	-26	NA	104787700	104792977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104788020_104789954_104790441_104791076
ES.26523.44	chr5	+	5756	3	Intergenic	novelGene_22045	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGAGTTTTACTGCTGT	NA	False	NA	NA	False	AATACA	-16	NA	104787952	104796279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104788020_104789954_104790441_104791076
ES.26523.45	chr5	+	6135	1	Intergenic	novelGene_22046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGACTTGTGTGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	104793091	104799226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104793100_104799200
ES.26523.46	chr5	+	6486	1	Intergenic	novelGene_22047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGAGTCACAGTGC	NA	False	NA	NA	False	NA	NA	NA	104795601	104802087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104795600_104802100
ES.26523.47	chr5	+	2467	1	Intergenic	novelGene_22048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGACTCTGCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	104795657	104798124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104795700_104798100
ES.26523.48	chr5	+	7933	5	Intergenic	novelGene_22050	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	45.2016316077196	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTTTGAATTGATGA	NA	False	NA	NA	False	AATAAA	-20	NA	104810189	104849502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328_104841162_104844744
ES.26523.49	chr5	+	2711	5	Intergenic	novelGene_22051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.9869720947369	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTTATGAATGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	104810197	104840665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104810649_104810690_104836648_104836776_104837017_104837079_104838328
ES.26523.5	chr5	+	8751	8	FSM	ENSMUSG00000097392.5	ENSMUST00000239420.2	9445	8	9	685	7	-685	multi-exon	FALSE	canonical	1	3	junction_4	5.06287004190553	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAAGAGCAGTAGCTGA	NA	False	NA	NA	False	NA	NA	NA	104656224	104701388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.50	chr5	+	6691	4	Intergenic	novelGene_22052	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	44.9666543118342	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGGATCCTGTAGCAG	NA	False	NA	NA	False	NA	NA	NA	104810198	104844686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328
ES.26523.51	chr5	+	7898	5	Intergenic	novelGene_22053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	45.2016316077196	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATAATTATA	NA	False	NA	NA	False	NA	NA	NA	104810198	104849475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328_104841168_104844749
ES.26523.52	chr5	+	3043	5	Intergenic	novelGene_22054	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	45.2016316077196	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATAATTATA	NA	False	NA	NA	False	NA	NA	NA	104810208	104849475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328_104840765_104849191
ES.26523.53	chr5	+	3368	5	Intergenic	novelGene_22055	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	45.2016316077196	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTCCAGTCTCTATTG	NA	False	NA	NA	False	NA	NA	NA	104810209	104844957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328_104841162_104844744
ES.26523.54	chr5	+	3911	4	Intergenic	novelGene_22056	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	44.9666543118342	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGTGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	104810241	104841949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104836648_104836776_104837017_104837079_104838328
ES.26523.55	chr5	+	3459	6	Intergenic	novelGene_22057	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	43.4538836008935	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104810261	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104810344_104888834_104888902_104895041_104895169_104895405_104895467_104896979_104898005_104898256
ES.26523.56	chr5	+	3151	1	Intergenic	novelGene_22059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTAGTGTGTATTG	NA	False	NA	NA	False	AATATA	-7	NA	104846196	104849347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104846200_104849300
ES.26523.57	chr5	+	3665	6	Intergenic	novelGene_22060	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	39.9869978868132	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTACTCATTTTTAA	NA	False	NA	NA	False	AATAAA	-35	NA	104870705	104900372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871610_104895041_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.58	chr5	+	3625	6	Intergenic	novelGene_22061	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	39.9869978868132	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGTGTTCGTTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	104870724	104900351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871610_104895041_104895169_104895405_104895467_104896979_104897921_104898172
ES.26523.59	chr5	+	3691	7	Intergenic	novelGene_22062	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	39.9360600070774	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104870727	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871610_104888834_104888902_104895041_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.6	chr5	+	4081	6	NNC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_1	8.49470423263812	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	NA	False	NA	4	True	AATAAA	-20	NA	104656228	104702073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104656438_104672124_104672292_104673683_104673839_104686691_104686823_104689031_104689129_104698751
ES.26523.60	chr5	+	3510	5	Intergenic	novelGene_22063	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	45.0804835821445	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104870727	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870886_104894999_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.61	chr5	+	3697	4	Intergenic	novelGene_22064	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	30.554141381416	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104870728	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104895041_104895169_104895405_104895467_104896979
ES.26523.62	chr5	+	3751	7	Intergenic	novelGene_22066	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	39.9360600070774	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGTTGAATTACA	NA	False	NA	NA	False	AATAAA	-18	NA	104870730	104900355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871614_104888777_104888902_104895041_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.63	chr5	+	3728	6	Intergenic	novelGene_22065	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	41.1465672930319	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGTTCGTTGAATTA	NA	False	NA	NA	False	AATAAA	-16	NA	104870730	104900353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871614_104894938_104895169_104895405_104895467_104896979_104898005_104898256
ES.26523.64	chr5	+	3752	5	Intergenic	novelGene_22067	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	44.6374282413313	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGTGTTCGTTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	104870738	104900351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104888834_104888902_104895041_104895169_104895405_104895467_104896979
ES.26523.65	chr5	+	3608	6	Intergenic	novelGene_22068	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	39.9869978868132	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTTGTGTTCGTTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	104870741	104900350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104871431_104871610_104895041_104895169_104895405_104895467_104896979_104897899_104898149
ES.26523.66	chr5	+	3431	5	Intergenic	novelGene_22069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	39.1599284984026	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTTCGTTGAATTAC	NA	False	NA	NA	False	AATAAA	-17	NA	104870743	104900354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104870864_104895041_104895169_104895405_104895467_104896979_104897892_104898143
ES.26523.7	chr5	+	13066	7	NNC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	14	-4	intron_retention	TRUE	canonical	1	1	junction_5	6.51707159867238	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACAGCTTGGTTCTTT	NA	False	NA	0	True	AATAAA	-16	NA	104656231	104702069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104673839_104686691_104689129_104698533_104698591_104698751
ES.26523.8	chr5	+	10692	7	NNC	ENSMUSG00000097392.5	novel	9445	8	NA	NA	14	0	intron_retention	FALSE	canonical	2	7	junction_3	4.12310562561766	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	NA	False	NA	4	True	AATAAA	-20	NA	104656231	104702073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_104656438_104665288_104672015_104672124_104672163_104673683_104673839_104686691_104686840_104689031_104689129_104698751
ES.26523.9	chr5	+	1395	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	18	3768	18	-3768	multi-exon	FALSE	canonical	3	13	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATAAGGTAGAGAAGGC	NA	False	NA	NA	False	AAAAAG	-29	NA	104656235	104666481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_104656438_104665288
ES.26524.1	chr5	-	207	1	Intergenic	novelGene_22049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAATGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	104809002	104808795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104808800_104809000
ES.26525.1	chr5	-	177	1	Intergenic	novelGene_22058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAACTCAAACA	NA	False	NA	NA	False	NA	NA	NA	104826632	104826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104826500_104826600
ES.26526.1	chr5	+	4491	1	Intergenic	novelGene_22070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATACGTGTGTCTAAGT	NA	False	NA	NA	False	AATAAA	-36	NA	104901377	104905868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104901400_104905900
ES.26527.1	chr5	+	5543	2	Intergenic	novelGene_22071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTCGTCGAGAATTA	NA	False	NA	NA	False	NA	NA	NA	104918259	104932527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104918396_104927120
ES.26528.1	chr5	+	172	1	Intergenic	novelGene_22074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACAAATGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	104986612	104986784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104986600_104986800
ES.26528.2	chr5	+	320	1	Intergenic	novelGene_22075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACATAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	104986613	104986933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_104986600_104986900
ES.26529.1	chr5	+	4153	1	Intergenic	novelGene_22076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTTAAACATTTATAAATA	NA	False	NA	NA	False	NA	NA	NA	105001313	105005466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105001300_105005500
ES.26529.2	chr5	+	4839	1	Intergenic	novelGene_22077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCACAAACTCCCACAAAA	NA	False	NA	NA	False	NA	NA	NA	105001315	105006154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105001300_105006200
ES.2653.1	chr10	+	209	1	Intergenic	novelGene_2020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGAAGAGGAGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	40841142	40841351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_40841100_40841400
ES.26530.1	chr5	-	1716	5	Genic_Genomic	ENSMUSG00000072774.11	novel	2904	5	NA	NA	39	21161	multi-exon	TRUE	non_canonical	0	0	junction_1	32.1198925901068	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATTACAAATATA	NA	False	NA	NA	False	TATAAA	-13	NA	105007897	104939873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_104940240_104950497_104951336_104952168_104952309_104953146_104953426_105007804
ES.26530.10	chr5	-	3341	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	31	513	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCAGGTTTCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	105007905	104960521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.11	chr5	-	2668	5	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	110.069296354615	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007646	104961033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_104992873_104992972_105007532
ES.26530.12	chr5	-	2889	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-29	1	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007965	104961033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.13	chr5	-	2781	5	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.068059678037	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007666	104961033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_104970072_104970264_105007532
ES.26530.14	chr5	-	3015	5	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	73	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.354825449547	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007863	104961033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_104985153_104985382_105007532
ES.26530.15	chr5	-	2527	4	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	61	1	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	77.67596510862	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGGAATTGTGCGTTT	NA	False	NA	-8	True	NA	NA	NA	105007875	104961033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007804
ES.26530.16	chr5	-	2840	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	64	0	64	0	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007872	104961034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
ES.26530.17	chr5	-	2691	6	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	103.023492466524	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007646	104961034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105002948_105003026_105007532
ES.26530.18	chr5	-	2572	5	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	99.5954316221382	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007876	104961034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007804
ES.26530.19	chr5	-	2427	6	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	110.037084657855	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007655	104961034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104961910_104962243_104963302_104964564_104964626_104964862_104964990_104973293_104973477_105007532
ES.26530.2	chr5	-	4279	1	Intergenic	novelGene_22072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGCCGTTTAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	104953553	104949274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104949300_104953600
ES.26530.20	chr5	-	3689	3	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	-6	-162	intron_retention	FALSE	canonical	3	193	junction_2	18.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTAGTCAACTTGAT	NA	False	NA	NA	False	NA	NA	NA	105007665	104961196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104964626_104964862_104964990_105007532
ES.26530.21	chr5	-	2681	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	11	-167	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGAATGTAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	105007925	104961201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.22	chr5	-	2111	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	13	-458	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTTTTCAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	105007646	104961492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.23	chr5	-	635	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	73	-977	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTTGTACTTTATACT	NA	False	NA	NA	False	NA	NA	NA	105007863	104963185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.24	chr5	-	2709	2	FSM	ENSMUSG00000072774.11	ENSMUST00000191135.2	1923	2	-172	-614	105	614	multi-exon	FALSE	canonical	3	8	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGGTCTCTTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	105007831	104982971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104985382_105007532
ES.26530.25	chr5	-	1926	2	FSM	ENSMUSG00000072774.11	ENSMUST00000191135.2	1923	2	3	-6	3	6	multi-exon	FALSE	canonical	3	8	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTTTCCCAGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	105007656	104983579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_104985382_105007532
ES.26530.26	chr5	-	472	2	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	5	-9036	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTCTGGGAATTTATT	NA	False	NA	NA	False	AATATA	-21	NA	105007654	104992621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104992972_105007532
ES.26530.3	chr5	-	2045	8	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	2	10917	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	82.959050631216	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATAAAGATTTTCATT	NA	False	NA	NA	False	AATAAA	-26	NA	105007657	104950117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
ES.26530.4	chr5	-	1242	4	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	71	10189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.6847772609735	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAAATTTTCTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	105007865	104950845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_105007532
ES.26530.5	chr5	-	5021	3	Intergenic	novelGene_22073	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_2	10.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAAATTTTCTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	104957537	104950845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_104951336_104952168_104952309_104953146
ES.26530.6	chr5	-	1480	7	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	71	10189	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	86.7437157506077	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAAATTTTCTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	105007865	104950845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_105007532
ES.26530.7	chr5	-	1462	6	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	38	10188	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	83.4491461909587	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGGAAATTTTCTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	105007898	104950846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104964564_104964626_104964862_104964990_105007532
ES.26530.8	chr5	-	5352	1	Genic_Genomic	ENSMUSG00000072774.11	novel	NA	NA	NA	NA	14475	4038	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCATCATTTGTTTG	NA	False	NA	NA	False	GATAAA	-42	NA	104962348	104956996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_104957000_104962300
ES.26530.9	chr5	-	4575	1	Genic_Genomic	ENSMUSG00000072774.11	novel	NA	NA	NA	NA	11733	519	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTCCAGTCTCTATTG	NA	False	NA	NA	False	NA	NA	NA	104965090	104960515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_104960500_104965100
ES.26531.1	chr5	-	3038	1	Intergenic	novelGene_22078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAAAACTTTACCTGCT	NA	False	NA	NA	False	NA	NA	NA	105064397	105061359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105061400_105064400
ES.26532.1	chr5	-	2237	1	Intergenic	novelGene_22079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGGTCTATCATGAGT	1618	False	NA	NA	False	NA	NA	NA	105082166	105079929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105079900_105082200
ES.26532.2	chr5	-	1040	1	Intergenic	novelGene_22080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACTAAATTGACCTTAG	1613	False	NA	NA	False	NA	NA	NA	105082171	105081131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105081100_105082200
ES.26533.1	chr5	-	4915	7	NNC	ENSMUSG00000029298.16	novel	4381	11	NA	NA	-11212	1166	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1.7950549357115	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTGTTCGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	105241841	105224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_105228131_105228995_105229190_105229516_105229620_105230569_105230777_105231438_105231720_105232785_105233032_105241758
ES.26533.2	chr5	-	4786	6	NNC	ENSMUSG00000029298.16	novel	4381	11	NA	NA	-11188	1164	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.03960780543711	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTTGTGTTCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	105241817	105224331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_105228131_105228995_105229190_105230569_105230777_105231438_105231720_105232785_105233032_105241758
ES.26533.3	chr5	-	2618	5	NNC	ENSMUSG00000029298.16	novel	5043	10	NA	NA	-11188	2	intron_retention	FALSE	canonical	1	1	junction_2	2.04633819296811	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCGATTATTATT	NA	False	NA	NA	False	AGTAAA	-14	NA	105241817	105227161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_105228131_105228995_105229190_105230569_105231720_105232785_105233032_105241758
ES.26534.1	chr5	+	177	1	Intergenic	novelGene_22081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTTGG	NA	False	NA	NA	False	NA	NA	NA	105295228	105295405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105295200_105295400
ES.26535.1	chr5	-	156	1	Intergenic	novelGene_22082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	105298029	105297873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105297900_105298000
ES.26536.1	chr5	-	3020	8	Intergenic	novelGene_22083	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.699854212223765	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAACAGCATACAACCAT	9617	False	NA	NA	False	AATAAA	-19	NA	105329440	105304953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105305919_105306803_105306998_105307325_105307429_105308387_105309535_105310524_105310771_105319520_105319718_105319900_105320011_105329382
ES.26537.1	chr5	+	4076	5	Fusion	ENSMUSG00000106438.2_ENSMUSG00000070639.6	novel	6726	5	NA	NA	-406	-2697	multi-exon	FALSE	canonical	0	0	junction_1	18.2825052987822	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGACATTGTAGCATG	2962	False	NA	18	True	AATAAA	-25	NA	105563234	105635243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_105563420_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.10	chr5	+	5539	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	52	1135	52	-1135	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATGGGTTCATGAAAAT	3420	False	NA	NA	False	ATTAAA	-13	NA	105563692	105636805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.11	chr5	+	6741	6	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	52	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.0724932822114	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTAGAATCTGATTGG	3420	False	NA	2	True	AATAAA	-15	NA	105563692	105637929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105563779_105616662_105616718_105620211_105620290_105624051_105624151_105627632_105629795_105633668
ES.26537.12	chr5	+	5700	3	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	64655	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCTGATTGGCCTTGT	7254	False	NA	8	True	AATAAA	-21	NA	105628295	105637935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105629795_105633668_105637437_105637502
ES.26537.13	chr5	+	6123	1	NIC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	68163	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATCACTAGAATCTGAT	NA	False	NA	-1	True	AATAAA	-12	NA	105631803	105637926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105631800_105637900
ES.26537.2	chr5	+	6762	5	Fusion	ENSMUSG00000106438.2_ENSMUSG00000070639.6	novel	6726	5	NA	NA	-393	2	multi-exon	FALSE	canonical	0	0	junction_1	18.2825052987822	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGCCTTGTTTTTGCC	2975	False	NA	15	True	AATAAA	-28	NA	105563247	105637942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_105563420_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.3	chr5	+	3624	2	ISM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-92	17884	-92	-17884	5prime_fragment	FALSE	canonical	3	31	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3276	False	NA	NA	False	NA	NA	NA	105563548	105620056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_105563779_105616662
ES.26537.4	chr5	+	6793	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-67	0	-67	0	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGCCTTGTTTTTG	3301	False	NA	13	True	AATAAA	-26	NA	105563573	105637940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.5	chr5	+	4053	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	-29	2702	-29	-2702	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAAGTGGACATTGTA	3339	False	NA	13	True	AATAAA	-20	NA	105563611	105635238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.6	chr5	+	4163	6	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	5	-2697	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.9138143006306	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGACATTGTAGCATG	3373	False	NA	18	True	AATAAA	-25	NA	105563645	105635243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105563779_105602568_105602708_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.7	chr5	+	6844	6	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.9138143006306	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTAGAATCTGATTGG	3378	False	NA	2	True	AATAAA	-15	NA	105563650	105637929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105563779_105602568_105602708_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.8	chr5	+	8725	6	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	39	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.9138143006306	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGAATCTGATTGGCC	3407	False	NA	4	True	AATAAA	-17	NA	105563679	105637931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105563779_105600660_105602708_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ES.26537.9	chr5	+	3281	2	NNC	ENSMUSG00000070639.6	novel	6726	5	NA	NA	51	-34086	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTATTTAATATTTGA	3419	False	NA	NA	False	ATTAAA	-15	NA	105563691	105603854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105563779_105600660
ES.26538.1	chr5	-	175	1	Intergenic	novelGene_22084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTTTTTACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105599417	105599242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105599200_105599400
ES.26539.1	chr5	-	2069	1	Antisense	novelGene_ENSMUSG00000070639.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTTTTCTGTGAACC	NA	False	NA	NA	False	AATAAA	-11	NA	105628611	105626542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105626500_105628600
ES.2654.1	chr10	+	152	1	Intergenic	novelGene_2021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACAAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	41086752	41086904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41086800_41086900
ES.26540.1	chr5	+	3598	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-659	4037	-659	2109	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTGACGTATCTGTTA	NA	False	NA	NA	False	TTTAAA	-15	NA	105666594	105756847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
ES.26540.2	chr5	+	7390	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-414	0	-414	0	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGACCCATCCTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	105666839	105760884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
ES.26540.3	chr5	+	2974	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	-176	4178	-176	1968	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTTTCCTATATTAT	NA	False	NA	NA	False	TATAAA	-15	NA	105667077	105756706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
ES.26540.4	chr5	+	3086	5	NIC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-50	2084	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.7549010188241	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTAAAGTTTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	105667203	105756822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105667497_105670495_105670618_105692065_105692137_105727333_105727476_105754364
ES.26540.5	chr5	+	2707	3	NNC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-13514	2084	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	10.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTAAAGTTTTATTT	8856	False	NA	NA	False	AATAAA	-26	NA	105693209	105756822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105693317_105727333_105727476_105754364
ES.26540.6	chr5	+	3962	1	Intergenic	novelGene_22085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTATGTGATGGCCAA	4638	False	NA	NA	False	NA	NA	NA	105723315	105727277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105723300_105727300
ES.26541.1	chr5	-	185	1	Intergenic	novelGene_22086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAACAAAAATAAAT	4465	False	NA	NA	False	NA	NA	NA	105795924	105795739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105795700_105795900
ES.26542.1	chr5	-	153	1	Intergenic	novelGene_22087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACAAAATAAATAAACT	NA	False	NA	NA	False	NA	NA	NA	105822293	105822140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_105822100_105822300
ES.26543.1	chr5	+	123	1	Intergenic	novelGene_22088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	7156	False	NA	NA	False	NA	NA	NA	105823816	105823939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105823800_105823900
ES.26544.1	chr5	+	162	1	Intergenic	novelGene_22089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105833230	105833392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105833200_105833400
ES.26545.1	chr5	+	2163	3	Intergenic	novelGene_22090	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTAAGGAAACTTCAC	NA	False	NA	NA	False	NA	NA	NA	105841868	105847129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105843138_105843633_105843791_105846392
ES.26545.2	chr5	+	184	1	Intergenic	novelGene_22091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTGCCTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	105843538	105843722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105843500_105843700
ES.26546.1	chr5	+	3637	4	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-312	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.631166376096	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	3759	False	NA	19	True	AATAAA	-30	NA	105847522	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105847695_105880095_105880241_105959589_105960029_105960195
ES.26546.10	chr5	+	4204	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	23	0	intron_retention	FALSE	canonical	3	23	junction_1	266.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4094	False	NA	19	True	AATAAA	-30	NA	105847857	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848430_105880095_105880241_105959589
ES.26546.11	chr5	+	3827	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	23	-480	intron_retention	FALSE	canonical	0	0	junction_1	257.294038450607	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGCAGTTTTTTGGT	4094	False	NA	16	True	ATTAAA	-16	NA	105847857	105962596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105862914_105863327_105880095_105880241_105959589
ES.26546.12	chr5	+	3545	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	42	-478	intron_retention	FALSE	canonical	0	0	junction_3	68.1191766114522	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTTTTTGGTTT	4113	False	NA	18	True	ATTAAA	-18	NA	105847876	105962598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105880095_105880241_105907251_105907399_105959589
ES.26546.13	chr5	+	3710	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	42	-475	intron_retention	FALSE	canonical	3	23	junction_1	266.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTTTTTTGGTTTTTT	4113	False	NA	21	True	ATTAAA	-21	NA	105847876	105962601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848430_105880095_105880241_105959589
ES.26546.14	chr5	+	3386	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	47	-479	intron_retention	FALSE	canonical	0	0	junction_1	278	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCAGTTTTTTGGTT	4118	False	NA	17	True	ATTAAA	-17	NA	105847881	105962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848115_105880095_105880241_105959589
ES.26546.15	chr5	+	3703	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	227.690335519294	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4119	False	NA	19	True	AATAAA	-30	NA	105847882	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105880095_105880241_105959589_105960029_105960195
ES.26546.16	chr5	+	3799	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	52	-3	intron_retention	FALSE	canonical	1	2	junction_1	277	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4123	False	NA	16	True	AATAAA	-27	NA	105847886	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848057_105880095_105880241_105959589
ES.26546.18	chr5	+	3571	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	68	-478	intron_retention	FALSE	canonical	0	0	junction_1	256.851448636496	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTTTTTGGTTT	4139	False	NA	18	True	ATTAAA	-18	NA	105847902	105962598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105852690_105852890_105880095_105880241_105959589
ES.26546.19	chr5	+	3992	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	251.023239296019	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4139	False	NA	19	True	AATAAA	-30	NA	105847902	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848430_105880095_105880241_105959589_105960029_105960195
ES.26546.2	chr5	+	3988	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-66	1	-66	-1	multi-exon	FALSE	canonical	3	145	junction_1	205.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTCACAACCTTTCTT	4005	False	NA	23	True	AATAAA	-34	NA	105847768	105963080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848121_105880095_105880241_105959589
ES.26546.20	chr5	+	3970	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	91	-4	intron_retention	FALSE	canonical	0	0	junction_3	68.1191766114522	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCGTAGTGGTTCACAA	4162	False	NA	15	True	AATAAA	-26	NA	105847925	105963072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105880095_105880241_105907251_105907399_105959589
ES.26546.21	chr5	+	3242	2	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	101	-478	intron_retention	FALSE	non_canonical	0	0	junction_1	0	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTTTTTGGTTT	4172	False	NA	18	True	ATTAAA	-18	NA	105847935	105962598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848164_105959584
ES.26546.23	chr5	+	4417	5	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	112	0	intron_retention	FALSE	canonical	0	0	junction_1	237.878514162166	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4183	False	NA	19	True	AATAAA	-30	NA	105847946	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105852690_105852890_105862914_105863327_105880095_105880241_105959589
ES.26546.24	chr5	+	3206	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	189	-482	intron_retention	FALSE	non_canonical	0	0	junction_3	235.48578631322	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATTGCAGTTTTTTG	4260	False	NA	14	True	ATTAAA	-14	NA	105848023	105962594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105880095_105880241_105959589_105962290_105962330
ES.26546.25	chr5	+	3932	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	228	-479	intron_retention	FALSE	canonical	1	1	junction_1	257.045175450196	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCAGTTTTTTGGTT	4299	False	NA	17	True	ATTAAA	-17	NA	105848062	105962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848430_105862914_105863327_105880095_105880241_105959589
ES.26546.26	chr5	+	3839	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-333	0	intron_retention	FALSE	canonical	3	13	junction_1	271.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4558	False	NA	19	True	AATAAA	-30	NA	105848321	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848529_105880095_105880241_105959589
ES.26546.27	chr5	+	3283	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-256	-479	intron_retention	FALSE	canonical	3	13	junction_1	271.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCAGTTTTTTGGTT	4635	False	NA	17	True	ATTAAA	-17	NA	105848398	105962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848529_105880095_105880241_105959589
ES.26546.28	chr5	+	3381	4	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-256	-481	intron_retention	FALSE	canonical	0	0	junction_1	256.851448636496	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGCAGTTTTTTGG	4635	False	NA	15	True	ATTAAA	-15	NA	105848398	105962595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848430_105852690_105852890_105880095_105880241_105959589
ES.26546.29	chr5	+	3799	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-247	1	intron_retention	FALSE	canonical	1	4	junction_1	225.857378793688	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTGGTTCACAACCTTT	4644	False	NA	20	True	AATAAA	-31	NA	105848407	105963077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848529_105848906_105848952_105880095_105880241_105959589
ES.26546.3	chr5	+	3500	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-52	475	-52	-470	multi-exon	FALSE	canonical	3	145	junction_1	205.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTTGGTTT	4019	False	NA	26	True	ATTAAA	-26	NA	105847782	105962606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848121_105880095_105880241_105959589
ES.26546.30	chr5	+	3298	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-228	-481	intron_retention	FALSE	canonical	1	4	junction_1	225.857378793688	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGCAGTTTTTTGG	4663	False	NA	15	True	ATTAAA	-15	NA	105848426	105962595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848529_105848906_105848952_105880095_105880241_105959589
ES.26546.31	chr5	+	3664	4	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-228	-482	intron_retention	FALSE	canonical	0	0	junction_1	257.294038450607	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATTGCAGTTTTTTG	4663	False	NA	14	True	ATTAAA	-14	NA	105848426	105962594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848529_105862914_105863327_105880095_105880241_105959589
ES.26546.32	chr5	+	3686	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-223	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	228.111814687447	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4668	False	NA	16	True	AATAAA	-27	NA	105848431	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960195_105960465_105960760
ES.26546.33	chr5	+	3444	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-59	-482	intron_retention	FALSE	non_canonical	0	0	junction_3	227.551215236385	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATTGCAGTTTTTTG	4832	False	NA	14	True	ATTAAA	-14	NA	105848595	105962594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105961713_105961774
ES.26546.34	chr5	+	4400	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-59	0	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4832	False	NA	19	True	AATAAA	-30	NA	105848595	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
ES.26546.35	chr5	+	3513	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	-54	470	-54	-470	multi-exon	FALSE	canonical	3	312	junction_1	122	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTTGGTTT	4837	False	NA	26	True	ATTAAA	-26	NA	105848600	105962606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848952_105880095_105880241_105959589
ES.26546.36	chr5	+	3307	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-23	-478	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	217.435558780578	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTTTTTGGTTT	4868	False	NA	18	True	ATTAAA	-18	NA	105848631	105962598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960195
ES.26546.37	chr5	+	3951	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	-18	-4	-18	-1	multi-exon	FALSE	canonical	3	312	junction_1	122	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTCACAACCTTTCTT	4873	False	NA	23	True	AATAAA	-34	NA	105848636	105963080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848952_105880095_105880241_105959589
ES.26546.38	chr5	+	3869	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	2	-470	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTTGGTTT	4893	False	NA	26	True	ATTAAA	-26	NA	105848656	105962606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
ES.26546.39	chr5	+	3648	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	4	-476	intron_retention	FALSE	canonical	3	20	junction_1	251.968692940655	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCAGTTTTTTGGTTTTT	4895	False	NA	20	True	ATTAAA	-20	NA	105848658	105962600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
ES.26546.4	chr5	+	4128	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	-11	0	intron_retention	TRUE	canonical	0	0	junction_1	256.851448636496	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4060	False	NA	19	True	AATAAA	-30	NA	105847823	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105852690_105852890_105880095_105880241_105959589
ES.26546.40	chr5	+	3515	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-476	intron_retention	FALSE	canonical	2	2	junction_1	257.020535279879	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCAGTTTTTTGGTTTTT	4913	False	NA	20	True	ATTAAA	-20	NA	105848676	105962600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105849356_105849441_105880095_105880241_105959589
ES.26546.41	chr5	+	3753	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	52	124	-25	-124	multi-exon	FALSE	canonical	3	312	junction_1	122	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCATAGGCTGGAGTT	4943	False	NA	13	True	AATAAA	-26	NA	105848706	105962952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848952_105880095_105880241_105959589
ES.26546.43	chr5	+	2972	4	NIC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-10	2250	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	146.609079603626	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGTTCTCTGACTTCT	4958	False	NA	NA	False	NA	NA	NA	105848721	105982552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105848952_105880095_105880241_105978232_105978330_105980052
ES.26546.44	chr5	+	3694	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	217.435558780578	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4959	False	NA	19	True	AATAAA	-30	NA	105848722	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960195
ES.26546.45	chr5	+	3541	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-9	-477	intron_retention	FALSE	canonical	0	0	junction_1	257.516342523473	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCAGTTTTTTGGTTTT	4959	False	NA	19	True	ATTAAA	-19	NA	105848722	105962599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105849283_105849441_105880095_105880241_105959589
ES.26546.46	chr5	+	3241	2	NIC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-5	-471	intron_retention	FALSE	canonical	0	0	junction_1	0	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTGGTTTTTTGGTT	4963	False	NA	25	True	ATTAAA	-25	NA	105848726	105962605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105848952_105959589
ES.26546.47	chr5	+	3239	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-5	-476	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	227.127472774407	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCAGTTTTTTGGTTTTT	4963	False	NA	20	True	ATTAAA	-20	NA	105848726	105962600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960170
ES.26546.48	chr5	+	4140	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-3	-127	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGCATAGGCTGGA	4965	False	NA	10	True	AATAAA	-23	NA	105848728	105962949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
ES.26546.49	chr5	+	4474	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	240.325170342185	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4966	False	NA	19	True	AATAAA	-30	NA	105848729	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105876588_105877139_105878781_105878852_105880095_105880241_105959589
ES.26546.5	chr5	+	3389	3	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	-10	-475	intron_retention	FALSE	canonical	1	2	junction_1	277	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCAGTTTTTTGGTTTTTT	4061	False	NA	21	True	ATTAAA	-21	NA	105847824	105962601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848057_105880095_105880241_105959589
ES.26546.50	chr5	+	3933	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	-3	intron_retention	FALSE	canonical	2	2	junction_1	257.020535279879	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4968	False	NA	16	True	AATAAA	-27	NA	105848731	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105849356_105849441_105880095_105880241_105959589
ES.26546.51	chr5	+	4365	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	-481	intron_retention	FALSE	canonical	0	0	junction_2	240.325170342185	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGCAGTTTTTTGG	4968	False	NA	15	True	ATTAAA	-15	NA	105848731	105962595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105876588_105877513_105878781_105878852_105880095_105880241_105959589
ES.26546.52	chr5	+	4207	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	235.96662899656	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4968	False	NA	16	True	AATAAA	-27	NA	105848731	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589_105962683_105962736
ES.26546.53	chr5	+	988	1	NIC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	-32385	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAGAGTGTTGACTGC	4968	False	NA	NA	False	ATTAAA	-12	NA	105848731	105849719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105848700_105849700
ES.26546.54	chr5	+	3167	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.4986771653491	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATTTATAACAAT	4969	False	NA	-19	True	AATATA	-33	NA	105848732	105963038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105852690_105852737_105959969_105960029_105960195
ES.26546.55	chr5	+	4050	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	0	intron_retention	FALSE	canonical	3	20	junction_1	251.968692940655	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4969	False	NA	19	True	AATAAA	-30	NA	105848732	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
ES.26546.56	chr5	+	4093	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	232.41826520306	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4969	False	NA	16	True	AATAAA	-27	NA	105848732	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589_105960029_105960195
ES.26546.57	chr5	+	3880	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-170	intron_retention	FALSE	canonical	3	20	junction_1	251.968692940655	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATACTAAAAATAA	4969	False	NA	-33	True	AATGAA	-41	NA	105848732	105962906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
ES.26546.58	chr5	+	3548	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	-136	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	217.435558780578	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTCACTTTATGTGCA	4969	False	NA	1	True	AATAAA	-14	NA	105848732	105962940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960195
ES.26546.6	chr5	+	3800	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	-9	132	-9	-127	multi-exon	FALSE	canonical	3	145	junction_1	205.5	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGCATAGGCTGGA	4062	False	NA	10	True	AATAAA	-23	NA	105847825	105962949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105848121_105880095_105880241_105959589
ES.26546.60	chr5	+	4492	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	240.325170342185	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCACAACCTTTCTTG	4969	False	NA	24	True	AATAAA	-35	NA	105848732	105963081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105876588_105877155_105878781_105878852_105880095_105880241_105959589
ES.26546.61	chr5	+	4121	5	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	235.810702683318	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4969	False	NA	19	True	AATAAA	-30	NA	105848732	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589_105960029_105960170
ES.26546.62	chr5	+	3679	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.551215236385	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4990	False	NA	16	True	AATAAA	-27	NA	105848753	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960176
ES.26546.63	chr5	+	3835	3	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	22	-130	intron_retention	FALSE	non_canonical	0	0	junction_1	278	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTATGTGCATAGGCT	4990	False	NA	7	True	AATAAA	-20	NA	105848753	105962946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848956_105879964_105880241_105959589
ES.26546.64	chr5	+	4225	3	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_2	156	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	5001	False	NA	19	True	AATAAA	-30	NA	105848764	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848952_105880095_105880647_105959589
ES.26546.65	chr5	+	4126	4	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	627	0	intron_retention	FALSE	canonical	1	1	junction_1	257.045175450196	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	5595	False	NA	19	True	AATAAA	-30	NA	105849358	105963076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105849441_105862914_105863327_105880095_105880241_105959589
ES.26546.66	chr5	+	3541	5	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	667	-479	intron_retention	FALSE	canonical	0	0	junction_1	9.82344135219425	752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCAGTTTTTTGGTT	5635	False	NA	17	True	ATTAAA	-17	NA	105849398	105962597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105849441_105852690_105852890_105880095_105880241_105907251_105907399_105959589
ES.26546.67	chr5	+	2702	1	Intergenic	novelGene_22092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCTGACTC	9842	False	NA	NA	False	NA	NA	NA	105853605	105856307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105853600_105856300
ES.26546.68	chr5	+	3797	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-1910	-3	intron_retention	FALSE	canonical	0	0	junction_1	278	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	786	False	NA	16	True	AATAAA	-27	NA	105877344	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105877513_105880095_105880241_105959589
ES.26546.69	chr5	+	3260	3	FSM	ENSMUSG00000046079.17	ENSMUST00000127686.8	498	3	122	-2884	-84	-478	multi-exon	FALSE	canonical	0	0	junction_1	278	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGCAGTTTTTTGGTTT	3213	False	NA	18	True	ATTAAA	-18	NA	105879771	105962598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_105879878_105880095_105880241_105959589
ES.26546.7	chr5	+	4331	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_1	257.294038450607	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	4067	False	NA	16	True	AATAAA	-27	NA	105847830	105963073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105862914_105863327_105880095_105880241_105959589
ES.26546.70	chr5	+	208	1	Intergenic	novelGene_22093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCCGCCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	105900238	105900446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105900200_105900400
ES.26546.71	chr5	+	2721	1	Intergenic	novelGene_22094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACTGTGTTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	105915562	105918283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105915600_105918300
ES.26546.72	chr5	+	218	1	Intergenic	novelGene_22095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	105927907	105928125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105927900_105928100
ES.26546.73	chr5	+	396	1	Intergenic	novelGene_22096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGGATTTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	105927907	105928303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_105927900_105928300
ES.26546.8	chr5	+	4083	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	68.3536555146996	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCGTAGTGGTTCACAA	4067	False	NA	15	True	AATAAA	-26	NA	105847830	105963072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_105848121_105880095_105880241_105916650_105916816_105959589
ES.26546.9	chr5	+	3287	2	NIC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	4	-482	intron_retention	FALSE	canonical	0	0	junction_1	0	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATTGCAGTTTTTTG	4075	False	NA	14	True	ATTAAA	-14	NA	105847838	105962594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_105848121_105959589
ES.26547.1	chr5	-	7008	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGACTTTGCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	105848579	105841571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105841600_105848600
ES.26547.2	chr5	-	5545	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGACATCCTCTACCC	NA	False	NA	NA	False	CATAAA	-7	NA	105848538	105842993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105843000_105848500
ES.26547.3	chr5	-	5200	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGAGTGGTGGCAGAAC	NA	False	NA	NA	False	NA	NA	NA	105848559	105843359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105843400_105848600
ES.26547.4	chr5	-	3611	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAACATGATAGGCCATAG	NA	False	NA	NA	False	AGTAAA	-13	NA	105848504	105844893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105844900_105848500
ES.26547.5	chr5	-	2240	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACCAACCAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	105848526	105846286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105846300_105848500
ES.26548.1	chr5	-	5131	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGGTGTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	105877199	105872068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_105872100_105877200
ES.26549.1	chr5	-	485	1	FSM	ENSMUSG00000067058.8	ENSMUST00000132586.2	393	1	-32	-60	-32	60	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTACTTCTTTGCTTGAT	NA	False	NA	NA	False	AATAAA	-43	NA	105945611	105945126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_105945100_105945600
ES.2655.1	chr10	+	177	1	Intergenic	novelGene_2022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGATATAAAT	NA	False	NA	NA	False	NA	NA	NA	41167679	41167856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41167700_41167900
ES.26550.1	chr5	-	1281	1	FSM	ENSMUSG00000094708.2	ENSMUST00000180167.2	1002	1	-73	-206	-73	206	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCACTGTAGAGCTGGA	NA	False	NA	NA	False	AATAAA	-40	NA	106011641	106010360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106010400_106011600
ES.26551.1	chr5	+	208	1	Intergenic	novelGene_22097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	106012711	106012919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106012700_106012900
ES.26552.1	chr5	+	2708	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-28	-13	-25	13	multi-exon	TRUE	canonical	3	25	junction_1	8.12708968677346	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTCTGTTTTGCCTGA	NA	False	NA	NA	False	AATACA	-29	NA	106024405	106063697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.10	chr5	+	2424	10	NNC	ENSMUSG00000029290.13	novel	1554	10	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTTTAGTTTTTATA	NA	False	NA	4	True	AATAAA	-15	NA	106024440	106063042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106057166_106058168_106059278_106059375_106062533
ES.26552.11	chr5	+	5225	9	NIC	ENSMUSG00000029290.13	novel	1554	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	2	3	junction_3	13.2328898960129	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTGTTCTTTTGTCA	NA	False	NA	NA	False	AATACA	-13	NA	106024440	106063681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106058168_106059278_106059375_106062533
ES.26552.12	chr5	+	2072	9	NIC	ENSMUSG00000029290.13	novel	2667	12	NA	NA	-4750	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14.7727578671012	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106034059	106063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_106034089_106034182_106034295_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.13	chr5	+	2446	9	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	9747	11	-4629	-11	3prime_fragment	FALSE	canonical	3	27	junction_1	7.67707626639204	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAATAATTTGTGTTC	NA	False	NA	NA	False	AATACA	-5	NA	106034180	106063673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.14	chr5	+	2093	9	NNC	ENSMUSG00000029290.13	novel	4672	11	NA	NA	-2394	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3527000944073	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106036415	106063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_106036461_106036588_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.15	chr5	+	1414	2	ISM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	34672	6	6326	-6	3prime_fragment	FALSE	canonical	3	32	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106059105	106063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_106059375_106062533
ES.26552.2	chr5	+	2176	9	NIC	ENSMUSG00000029290.13	novel	1554	10	NA	NA	-21	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	17.8728145517151	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106024409	106063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_106024565_106034052_106034143_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.3	chr5	+	2370	13	NNC	ENSMUSG00000029290.13	novel	2667	12	NA	NA	-14	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	12.4930536254708	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTAAAAAGTGTGAC	NA	False	NA	NA	False	ATTAAA	-17	NA	106024416	106063530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533_106062573_106062732
ES.26552.4	chr5	+	6725	10	NIC	ENSMUSG00000029290.13	novel	4672	11	NA	NA	-11	-239	intron_retention	FALSE	canonical	3	25	junction_1	8.4210201428873	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATCTGCCTTAATGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106024419	106063445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.5	chr5	+	2038	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	-13	642	-10	-1	multi-exon	FALSE	canonical	3	25	junction_1	8.12708968677346	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTTTAGTTTTTATA	NA	False	NA	4	True	AATAAA	-15	NA	106024420	106063042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.6	chr5	+	4692	11	FSM	ENSMUSG00000029290.13	ENSMUST00000136558.8	4672	11	-11	-9	-8	9	multi-exon	FALSE	canonical	3	25	junction_1	8.05977667184395	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCATGTCTGTTTTGC	NA	False	NA	NA	False	AATACA	-25	NA	106024422	106063693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26552.7	chr5	+	5082	9	NIC	ENSMUSG00000029290.13	novel	1554	10	NA	NA	2	-151	intron_retention	FALSE	canonical	2	3	junction_3	13.2328898960129	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTGTGACTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	106024435	106063533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_106024565_106026614_106026660_106034052_106034143_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106058168_106059278_106059375_106062533
ES.26552.8	chr5	+	1825	13	NNC	ENSMUSG00000029290.13	novel	2667	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	12.4930536254708	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCAGTTTAGTTTTTA	NA	False	NA	2	True	AATAAA	-13	NA	106024435	106063040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533_106062579_106062774
ES.26552.9	chr5	+	2652	12	NNC	ENSMUSG00000029290.13	novel	4672	11	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	12.9365904279616	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTTGTGTTCTTTTG	NA	False	NA	NA	False	AATACA	-10	NA	106024438	106063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034288_106036296_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ES.26553.1	chr5	+	162	1	Intergenic	novelGene_22098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGATAGCTTTGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	106117950	106118112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106118000_106118100
ES.26554.1	chr5	+	179	1	Intergenic	novelGene_22099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGGTTGATAA	NA	False	NA	NA	False	NA	NA	NA	106438174	106438353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106438200_106438400
ES.26555.1	chr5	+	4749	1	FSM	ENSMUSG00000106142.2	ENSMUST00000197908.2	742	1	-730	-3277	-730	3277	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106757427	106762176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_106757400_106762200
ES.26556.1	chr5	+	3153	3	Intergenic	novelGene_22100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCATAAAATAAGAACATAG	NA	False	NA	NA	False	NA	NA	NA	106784067	106828203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106786502_106814650_106814711_106827544
ES.26557.1	chr5	-	5109	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	4	200	intron_retention	FALSE	canonical	3	25	junction_4	36.9188298839495	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCAGGAGGTTGTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	106844426	106764404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106844397
ES.26557.10	chr5	-	5664	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	44.5748434284033	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTCTAATGTGAAACAT	NA	False	NA	-14	True	AATAAA	-19	NA	106844370	106764604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106844099
ES.26557.100	chr5	-	5469	9	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-22	-2	intron_retention	FALSE	canonical	2	4	junction_7	44.1163235095582	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTACGGTGCAGGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	106844485	106764940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106843508_106843566_106844397
ES.26557.101	chr5	-	6110	4	ISM	ENSMUSG00000049606.17	ENSMUST00000045466.14	5569	7	56319	334	-15266	-2	intron_retention	FALSE	canonical	3	98	junction_3	9.53356643071673	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTACGGTGCAGGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	106787522	106764940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475
ES.26557.102	chr5	-	4840	5	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	73	-2	intron_retention	FALSE	canonical	3	8	junction_4	42.0200844834943	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTACGGTGCAGGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	106843959	106764940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106843663
ES.26557.103	chr5	-	4963	6	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	7	-2	intron_retention	FALSE	canonical	3	7	junction_5	42.3698005659692	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGTACGGTGCAGGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	106844025	106764940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106843508_106843566_106843663
ES.26557.104	chr5	-	5726	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	3	junction_5	41.9006762077495	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTACGGTGCAGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	106844411	106764941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843002_106843566_106844397
ES.26557.105	chr5	-	5443	6	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	75	-3	intron_retention	FALSE	canonical	3	8	junction_5	39.6333193159493	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTACGGTGCAGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	106843957	106764941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843663
ES.26557.106	chr5	-	4688	4	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	68	-3	intron_retention	FALSE	canonical	3	15	junction_3	45.1072795307661	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTACGGTGCAGGTG	NA	False	NA	-8	True	AATAAA	-15	NA	106844603	106764941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106844397
ES.26557.107	chr5	-	5421	8	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	3	-213	intron_retention	FALSE	canonical	0	0	junction_7	46.7603529952982	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGAATAGGCTTTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	106844407	106765151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106844099
ES.26557.108	chr5	-	4036	5	ISM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	190	2670	10	-1439	5prime_fragment	FALSE	canonical	3	25	junction_4	31.5634282041733	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTATACTCATATGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	106844506	106767274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ES.26557.109	chr5	-	1809	3	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-12126	-17293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACTGTATTTTACTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	106827609	106803585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106805270_106814650_106814712_106827545
ES.26557.11	chr5	-	5135	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	25	junction_4	36.9188298839495	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTCTAATGTGAAACAT	NA	False	NA	-14	True	AATAAA	-19	NA	106844652	106764604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106844397
ES.26557.110	chr5	-	2781	4	NNC	ENSMUSG00000049606.17	novel	1484	3	NA	NA	-33	-20105	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.77123616632825	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACTTGTTTCACTTTG	NA	False	NA	NA	False	NA	NA	NA	106843911	106806397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106808836_106814650_106814712_106838595_106838744_106843777
ES.26557.111	chr5	-	1942	5	NNC	ENSMUSG00000049606.17	novel	642	3	NA	NA	-8	-20994	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.0286117237194	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGTTATATTAGAGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	106844524	106807286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106808836_106814650_106814712_106838595_106838744_106843508_106843566_106844397
ES.26557.112	chr5	-	6424	1	NIC	ENSMUSG00000049606.17	novel	2559	6	NA	NA	7303	7471	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGTGTGGTCGGGCT	NA	False	NA	NA	False	NA	NA	NA	106835586	106829162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106829200_106835600
ES.26557.113	chr5	-	3109	1	FSM	ENSMUSG00000049606.17	ENSMUST00000200481.2	6256	1	5768	-2621	5768	2621	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTACAATATCAGTA	NA	False	NA	NA	False	NA	NA	NA	106837121	106834012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106834000_106837100
ES.26557.114	chr5	-	4318	3	ISM	ENSMUSG00000049606.17	ENSMUST00000127434.8	2559	6	4	50101	4	1860	5prime_fragment	FALSE	canonical	2	6	junction_1	13.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGCTCTTGAGAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	106844688	106834773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_106838744_106843508_106843566_106844397
ES.26557.115	chr5	-	4941	3	NIC	ENSMUSG00000049606.17	novel	1484	3	NA	NA	-40	1859	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGCTCTTGAGAATT	NA	False	NA	NA	False	AATAAA	-12	NA	106844072	106834774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106838744_106843002_106843566_106843663
ES.26557.116	chr5	-	4323	3	FSM	ENSMUSG00000049606.17	ENSMUST00000142391.8	1484	3	12	-2851	12	1799	multi-exon	FALSE	canonical	2	6	junction_1	0.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	106844020	106834834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106838744_106843508_106843566_106843663
ES.26557.118	chr5	-	4283	3	FSM	ENSMUSG00000049606.17	ENSMUST00000148192.2	642	3	-6	-3635	-4	1799	multi-exon	FALSE	canonical	2	5	junction_2	0.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	106844416	106834834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106838744_106843508_106843566_106844099
ES.26557.119	chr5	-	4549	3	NIC	ENSMUSG00000049606.17	novel	1163	3	NA	NA	-22	1788	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGAAAATTTTTGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	106844485	106834845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106838744_106843002_106843566_106844397
ES.26557.12	chr5	-	5923	9	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	49.6531721041063	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTCTAATGTGAAACAT	NA	False	NA	-14	True	AATAAA	-19	NA	106844524	106764604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827557_106827610_106829769_106829880_106838595_106838744_106844397
ES.26557.120	chr5	-	4758	3	NNC	ENSMUSG00000049606.17	novel	1163	3	NA	NA	5	1783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCCATGTGAAAATTTT	NA	False	NA	NA	False	AATAAA	-6	NA	106844405	106834850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106838740_106843002_106843566_106844099
ES.26557.121	chr5	-	1063	1	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	1	-407	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCGAAGTGTTTGGGTG	NA	False	NA	NA	False	NA	NA	NA	106844695	106843632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106843600_106844700
ES.26557.13	chr5	-	5578	8	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	41.1676512592604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTCTAATGTGAAACAT	NA	False	NA	-14	True	AATAAA	-19	NA	106844525	106764604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106843508_106843566_106844397
ES.26557.14	chr5	-	5675	5	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_4	47.6307411237743	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106844028	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106843777
ES.26557.15	chr5	-	2087	3	FSM	ENSMUSG00000049606.17	ENSMUST00000125895.2	836	3	-21	-1230	0	-1	multi-exon	FALSE	canonical	1	4	junction_2	58.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106844692	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106844397
ES.26557.16	chr5	-	5424	8	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	55	-1	intron_retention	FALSE	canonical	2	4	junction_6	40.7586224757713	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106843977	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106843508_106843566_106843663
ES.26557.17	chr5	-	5781	7	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	66	-1	intron_retention	FALSE	canonical	0	0	junction_6	47.3591478902322	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106843966	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106829769_106829877_106843777
ES.26557.18	chr5	-	5758	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106844731	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
ES.26557.19	chr5	-	5695	8	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	48.2298916542386	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106844414	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814727_106827541_106827610_106829769_106829880_106844397
ES.26557.2	chr5	-	6382	8	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	37	189	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	43.3043335720855	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTAGTGTGTAAAATCAG	NA	False	NA	NA	False	AATAAA	-17	NA	106844634	106764415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106843002_106843566_106844397
ES.26557.20	chr5	-	5907	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	7	junction_6	44.4100213915733	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106844028	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106843663
ES.26557.21	chr5	-	5625	7	FSM	ENSMUSG00000049606.17	ENSMUST00000045466.14	5569	7	-55	-1	-18	-1	multi-exon	FALSE	canonical	3	8	junction_6	43.3346153656507	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTCTAATGTGAAACA	NA	False	NA	-15	True	AATAAA	-18	NA	106843896	106764605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106843663
ES.26557.22	chr5	-	6350	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	8	0	intron_retention	FALSE	canonical	1	3	junction_5	47.3063303257491	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844402	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843002_106843566_106844099
ES.26557.23	chr5	-	6148	10	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	43.8887482416874	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844417	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106843002_106843566_106844397
ES.26557.24	chr5	-	5391	7	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	3	0	intron_retention	FALSE	canonical	2	5	junction_6	43.099368389288	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844407	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106838595_106838744_106843508_106843566_106844099
ES.26557.25	chr5	-	5295	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	31	0	intron_retention	FALSE	canonical	2	7	junction_6	41.0869673849128	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844640	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106844397
ES.26557.26	chr5	-	5863	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-19	0	intron_retention	FALSE	canonical	1	2	junction_3	44.5854166179929	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844482	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106780790_106780911_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106844397
ES.26557.27	chr5	-	6016	8	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-14	0	intron_retention	FALSE	canonical	1	2	junction_5	48.2180421817055	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844710	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106808673_106808836_106814650_106814712_106843508_106843566_106844397
ES.26557.28	chr5	-	6074	11	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	44.0237435936564	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844701	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106838595_106838744_106843508_106843566_106844397
ES.26557.29	chr5	-	5990	7	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	11	0	intron_retention	FALSE	canonical	1	4	junction_6	45.9770474137791	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844021	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106838595_106838744_106843663
ES.26557.3	chr5	-	5848	6	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	24	17	intron_retention	FALSE	canonical	3	8	junction_5	39.6333193159493	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTATTTTTTTTATT	NA	False	NA	3	True	AATAAA	-36	NA	106844008	106764587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843663
ES.26557.30	chr5	-	5683	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_5	42.3179105764398	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844432	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106838536_106838744_106843002_106843566_106844397
ES.26557.31	chr5	-	5591	6	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	51.9330338031585	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844433	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786524_106829769_106829880_106844397
ES.26557.32	chr5	-	5791	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-44	0	intron_retention	FALSE	canonical	0	0	junction_4	49.1991418172671	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844560	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106838595_106838744_106843508_106843566_106844397
ES.26557.33	chr5	-	5784	6	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_4	46.7700759032953	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844701	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106843508_106843566_106844397
ES.26557.34	chr5	-	5744	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	21	0	intron_retention	FALSE	canonical	1	2	junction_5	49.8221838140401	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844495	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106808673_106808836_106814650_106814712_106844397
ES.26557.35	chr5	-	5952	8	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_7	45.4905237945447	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844691	106764606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106844397
ES.26557.36	chr5	-	5410	7	FSM	ENSMUSG00000049606.17	ENSMUST00000112698.8	5689	7	279	0	-5	0	multi-exon	FALSE	canonical	3	18	junction_4	39.4859327975026	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844417	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106844397
ES.26557.37	chr5	-	5132	4	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	15	junction_3	45.1072795307661	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844713	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106844397
ES.26557.38	chr5	-	8927	8	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	21	0	intron_retention	TRUE	canonical	0	0	junction_4	49.7586009384	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844011	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106786502_106814650_106816623_106816868_106817707_106827545_106827610_106829769_106829880_106843663
ES.26557.39	chr5	-	5876	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-9	0	intron_retention	FALSE	canonical	2	7	junction_6	45.7192519623845	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844680	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106829769_106829880_106844397
ES.26557.4	chr5	-	2213	4	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	15	5	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	48.3206880009887	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTGAAACATTTGTT	NA	False	NA	-9	True	AATAAA	-24	NA	106844017	106764599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106814650_106814712_106843663
ES.26557.40	chr5	-	4893	6	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	38.1973821092493	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844506	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106784190_106784282_106786502_106814650_106814712_106844397
ES.26557.41	chr5	-	6141	12	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	45.3932313736911	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844691	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106817628_106817707_106827545_106827610_106829769_106829880_106838595_106838744_106843508_106843566_106844397
ES.26557.42	chr5	-	5950	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	12	0	intron_retention	FALSE	canonical	2	3	junction_6	46.6455309280059	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844020	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106829769_106829880_106843663
ES.26557.43	chr5	-	5901	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_3	45.3345588069656	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844695	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106780790_106780911_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ES.26557.44	chr5	-	5202	4	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_3	50.2460612054982	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844485	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106844099
ES.26557.45	chr5	-	5166	5	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	44.4543304977142	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844690	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106843508_106843566_106844397
ES.26557.46	chr5	-	5062	4	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-31	0	intron_retention	FALSE	canonical	1	2	junction_3	49.5333781964804	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106843909	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106843663
ES.26557.47	chr5	-	5870	6	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-23	0	intron_retention	FALSE	canonical	1	3	junction_5	41.5066259770654	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844486	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844099
ES.26557.48	chr5	-	5810	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-175	0	intron_retention	FALSE	canonical	0	0	junction_5	49.0266190451677	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844207	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827557_106827610_106829769_106829880_106843508_106843566_106844099
ES.26557.49	chr5	-	6166	8	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_4	52.6796246868071	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844006	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106804661_106804892_106814650_106814712_106829769_106829880_106843663
ES.26557.5	chr5	-	5848	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-2	4	intron_retention	FALSE	canonical	3	14	junction_5	38.9333476027371	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATGTGAAACATTTGT	NA	False	NA	-10	True	AATAAA	-23	NA	106844698	106764600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106844397
ES.26557.51	chr5	-	5900	8	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	34	0	intron_retention	FALSE	canonical	1	2	junction_3	43.8811009479954	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844637	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106780790_106780911_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106844397
ES.26557.52	chr5	-	2254	5	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	46.5966737010272	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844690	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106814650_106814712_106829769_106829880_106844397
ES.26557.53	chr5	-	5953	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	47.1369164126048	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844458	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106843002_106843566_106844397
ES.26557.54	chr5	-	5684	6	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	48.9979591411724	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844018	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106843663
ES.26557.55	chr5	-	5727	6	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	11	0	intron_retention	FALSE	canonical	2	3	junction_5	41.5066259770654	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844021	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843777
ES.26557.56	chr5	-	3571	2	ISM	ENSMUSG00000049606.17	ENSMUST00000112694.6	1765	3	2967	-331	2967	0	3prime_fragment	FALSE	canonical	3	121	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106769289	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_106766295_106767405
ES.26557.57	chr5	-	5358	6	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-12103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.5483602150465	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106827586	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106827557
ES.26557.58	chr5	-	6022	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	47.9907217595235	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCCTCTAATGTGAAA	NA	False	NA	-17	True	AATAAA	-16	NA	106844691	106764607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106817628_106817707_106829769_106829880_106843508_106843566_106844397
ES.26557.59	chr5	-	5623	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_5	41.2027507172357	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844433	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106838595_106838744_106843002_106843566_106844397
ES.26557.6	chr5	-	5851	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	1	3	intron_retention	FALSE	canonical	2	2	junction_6	45.0237591599023	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAATGTGAAACATTTG	NA	False	NA	-11	True	AATAAA	-22	NA	106844695	106764601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106844397
ES.26557.60	chr5	-	6402	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	12	1	intron_retention	FALSE	canonical	1	3	junction_5	46.8638690487909	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844020	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843002_106843566_106843663
ES.26557.61	chr5	-	6082	10	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	47.5815090134813	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844031	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106808684_106808836_106814650_106814712_106827545_106827610_106829769_106829880_106843663
ES.26557.62	chr5	-	5634	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-34	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	50.7236521643394	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106843912	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106843508_106843566_106843663
ES.26557.63	chr5	-	5928	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-25	1	intron_retention	FALSE	canonical	3	5	junction_6	44.8902983827117	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844488	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106844099
ES.26557.64	chr5	-	5618	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	43.965718179054	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCTCTAATGTGAA	NA	False	NA	-18	True	AATAAA	-15	NA	106844421	106764608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106838595_106838744_106843508_106843566_106844397
ES.26557.65	chr5	-	5191	5	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	53	0	intron_retention	FALSE	canonical	3	8	junction_4	42.0200844834943	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106843979	106764609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106843663
ES.26557.66	chr5	-	5651	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_4	50.5681608216958	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106844416	106764609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106808684_106808836_106814650_106814712_106844397
ES.26557.67	chr5	-	5026	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_5	40.2260971123087	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106844427	106764609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106827545_106827610_106843508_106843566_106844397
ES.26557.68	chr5	-	6412	5	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_4	27.4988636128841	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106844032	106764609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106767509_106783475_106786502_106814650_106814712_106843508_106843566_106843663
ES.26557.69	chr5	-	5242	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	3	junction_6	41.7389373234261	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106843856	106764609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106843663
ES.26557.7	chr5	-	6140	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-22	3	intron_retention	FALSE	canonical	1	3	junction_5	41.9006762077495	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAATGTGAAACATTTG	NA	False	NA	-11	True	AATAAA	-22	NA	106844485	106764601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843002_106843566_106844397
ES.26557.70	chr5	-	5060	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	4	junction_5	40.7785346584314	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGTGCCTCTAATGT	NA	False	NA	-21	True	AATAAA	-12	NA	106844417	106764611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106829769_106829880_106843508_106843566_106844397
ES.26557.71	chr5	-	5435	6	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	45.6008771845455	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	False	NA	-24	True	AATAAA	-9	NA	106844510	106764614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106844397
ES.26557.72	chr5	-	5394	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	22	-5	intron_retention	FALSE	canonical	1	2	junction_4	42.4682888230213	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	False	NA	-24	True	AATAAA	-9	NA	106844649	106764614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106783475_106786502_106808673_106808836_106814650_106814712_106829769_106829880_106844397
ES.26557.73	chr5	-	5123	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	38	-5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	41.5478305356877	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	False	NA	-24	True	AATAAA	-9	NA	106844633	106764614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106784190_106784282_106786502_106814650_106814712_106829769_106829880_106844397
ES.26557.74	chr5	-	5084	6	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	42.5769890903525	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	False	NA	-24	True	AATAAA	-9	NA	106844406	106764614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106784190_106784282_106786502_106814650_106814712_106844099
ES.26557.75	chr5	-	5598	9	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-10	-7	combination_of_known_junctions	FALSE	canonical	2	7	junction_8	45.0333209967908	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAATTACAGTGCCTCT	NA	False	NA	-26	True	AATAAA	-7	NA	106844440	106764616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106844397
ES.26557.76	chr5	-	4619	3	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-14156	-106	intron_retention	FALSE	canonical	3	41	junction_2	40	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTTGGTAGAGGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	106786412	106764715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475
ES.26557.77	chr5	-	5891	7	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	4	-106	intron_retention	FALSE	canonical	1	1	junction_4	52.8109837060436	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTTTGGTAGAGGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	106844028	106764715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106808684_106808836_106814650_106814712_106843663
ES.26557.78	chr5	-	5675	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	-6	116	-6	-111	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGAGTGTTTGGTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	106844702	106764720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ES.26557.79	chr5	-	5705	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	5	-119	intron_retention	FALSE	canonical	1	1	junction_6	46.4858849544676	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGTTAAAGGAGTGT	NA	False	NA	NA	False	AATAAA	-4	NA	106844425	106764728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106829769_106829880_106838595_106838744_106843508_106843566_106844397
ES.26557.8	chr5	-	5575	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-4	3	intron_retention	FALSE	canonical	1	1	junction_5	41.3215709069999	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAATGTGAAACATTTG	NA	False	NA	-11	True	AATAAA	-22	NA	106844416	106764601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106829769_106829880_106843002_106843566_106844397
ES.26557.80	chr5	-	5364	6	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-177	15	intron_retention	FALSE	canonical	0	0	junction_4	53.5835795743435	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGGTCATGATAAACT	NA	False	NA	10	True	AATAAA	-33	NA	106844209	106764923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106838595_106838744_106844099
ES.26557.81	chr5	-	5131	6	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-9	5	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	45.6008771845455	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGCAGGTGTCTTGGTC	NA	False	NA	0	True	AATAAA	-23	NA	106844525	106764933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106844397
ES.26557.82	chr5	-	5587	9	NNC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-176	4	intron_retention	FALSE	canonical	0	0	junction_8	48.1092506696997	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGCAGGTGTCTTGGT	NA	False	NA	-1	True	AATAAA	-22	NA	106844208	106764934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106838595_106838744_106844099
ES.26557.83	chr5	-	5425	6	NNC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-64	3	intron_retention	FALSE	canonical	0	0	junction_4	52.8643547203595	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGTGCAGGTGTCTTGG	NA	False	NA	-2	True	AATAAA	-21	NA	106844580	106764935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106838595_106838744_106844397
ES.26557.84	chr5	-	5530	8	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-63	3	intron_retention	FALSE	non_canonical	0	0	junction_5	48.2298916542386	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGTGCAGGTGTCTTGG	NA	False	NA	-2	True	AATAAA	-21	NA	106844579	106764935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814727_106827541_106827610_106829769_106829880_106844397
ES.26557.85	chr5	-	5600	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-19	3	intron_retention	FALSE	canonical	3	7	junction_6	44.4100213915733	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGTGCAGGTGTCTTGG	NA	False	NA	-2	True	AATAAA	-21	NA	106844051	106764935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106843663
ES.26557.86	chr5	-	5391	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	63	331	38	3	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGTGCAGGTGTCTTGG	NA	False	NA	-2	True	AATAAA	-21	NA	106844633	106764935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ES.26557.87	chr5	-	5230	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-4	2	intron_retention	FALSE	canonical	3	14	junction_5	38.9333476027371	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTGCAGGTGTCTTG	NA	False	NA	-3	True	AATAAA	-20	NA	106844416	106764936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106843508_106843566_106844397
ES.26557.88	chr5	-	5704	8	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-7	2	intron_retention	FALSE	canonical	3	3	junction_7	46.2045143125338	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTGCAGGTGTCTTG	NA	False	NA	-3	True	AATAAA	-20	NA	106844039	106764936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106827545_106827610_106829769_106829880_106843663
ES.26557.89	chr5	-	5487	7	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	-5	2	intron_retention	FALSE	canonical	3	3	junction_6	50.6866736814411	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTGCAGGTGTCTTG	NA	False	NA	-3	True	AATAAA	-20	NA	106843883	106764936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106827545_106827610_106829769_106829880_106843663
ES.26557.9	chr5	-	5790	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	-4	-1	-4	1	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCTAATGTGAAACATT	NA	False	NA	-13	True	AATAAA	-20	NA	106844700	106764603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ES.26557.90	chr5	-	4628	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	37.5440482041502	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTGCAGGTGTCTTG	NA	False	NA	-3	True	AATAAA	-20	NA	106844513	106764936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106784190_106784282_106786502_106814650_106814712_106843508_106843566_106844397
ES.26557.91	chr5	-	5455	7	NIC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	44.5748434284033	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACGGTGCAGGTGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	106844494	106764937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106844099
ES.26557.92	chr5	-	5198	6	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-22	1	intron_retention	FALSE	canonical	1	3	junction_4	40.556133938037	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACGGTGCAGGTGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	106844485	106764937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106843002_106843566_106844397
ES.26557.93	chr5	-	5405	8	NIC	ENSMUSG00000049606.17	novel	5569	7	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	45.3926182976744	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACGGTGCAGGTGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	106844387	106764937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106843508_106843566_106844099
ES.26557.94	chr5	-	5451	8	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_4	50.1068246604295	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACGGTGCAGGTGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	106844442	106764938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106829769_106829880_106838595_106838744_106843508_106843566_106844397
ES.26557.95	chr5	-	5361	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACGGTGCAGGTGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	106844667	106764938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
ES.26557.96	chr5	-	5355	9	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	47.1551627608261	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACGGTGCAGGTGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	106844485	106764938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106808684_106808836_106814650_106814712_106843508_106843566_106844397
ES.26557.97	chr5	-	4890	7	NNC	ENSMUSG00000049606.17	novel	5689	7	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_5	44.0025251800646	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTACGGTGCAGGTGTC	NA	False	NA	-6	True	AATAAA	-17	NA	106844534	106764939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106827545_106827610_106838595_106838740_106844397
ES.26557.98	chr5	-	1762	3	FSM	ENSMUSG00000049606.17	ENSMUST00000125895.2	836	3	-30	-896	-5	-1	multi-exon	FALSE	canonical	1	4	junction_2	58.5	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTACGGTGCAGGTGTC	NA	False	NA	-6	True	AATAAA	-17	NA	106844701	106764939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_106766295_106767405_106767509_106844397
ES.26557.99	chr5	-	4729	6	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	14	junction_4	37.8861452248708	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTACGGTGCAGGTGTC	NA	False	NA	-6	True	AATAAA	-17	NA	106844524	106764939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106843508_106843566_106844397
ES.26558.1	chr5	+	174	1	Intergenic	novelGene_22101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	106846739	106846913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106846700_106846900
ES.26559.1	chr5	+	176	1	Intergenic	novelGene_22102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	106871666	106871842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_106871700_106871800
ES.2656.1	chr10	-	6244	24	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	60	3076	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7644734070439	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	41179196	41061091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064100_41064153_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.10	chr10	-	3202	22	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	85.0989819838867	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179227	41064167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.14	chr10	-	3330	24	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.835666343488	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179234	41064167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41095903_41095974_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.16	chr10	-	3281	24	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	109.971486251118	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTTTTGCTTCTGAC	NA	False	NA	-26	True	AATAAA	-16	NA	41179181	41064168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146438_41148067_41148149_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.17	chr10	-	5035	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	199	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	83.5958399850729	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTTTTGCTTCTGA	NA	False	NA	-27	True	AATAAA	-15	NA	41179057	41064169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41107130_41107191_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.2	chr10	-	4192	18	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	35504	1877	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.1586675313552	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTGCTATTTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	41143752	41062290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064100_41064153_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682
ES.2656.20	chr10	-	5008	22	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	28	-2	intron_retention	FALSE	canonical	3	326	junction_18	29.0859232225009	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTTTTGCTTCTGA	NA	False	NA	-27	True	AATAAA	-15	NA	41179228	41064169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.21	chr10	-	4534	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	75	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.2977334427187	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTTTTGCTTCTGA	NA	False	NA	-27	True	AATAAA	-15	NA	41179181	41064169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41129041_41129467_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.22	chr10	-	3206	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	83.1972787420517	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGTTTTGCTTCTGA	NA	False	NA	-27	True	AATAAA	-15	NA	41179236	41064169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116586_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.23	chr10	-	3218	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	57	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	83.5487807231834	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGGTTTTGCTTCTG	NA	False	NA	-28	True	AATAAA	-14	NA	41179199	41064170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143804_41146290_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.24	chr10	-	3316	24	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	109.924376823514	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGGTTTTGCTTCTG	NA	False	NA	-28	True	AATAAA	-14	NA	41179218	41064170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41114744_41114820_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.25	chr10	-	3249	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	83.2391878666185	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTGGTTTTGCTTC	NA	False	NA	-30	True	AATAAA	-12	NA	41179244	41064172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178998
ES.2656.29	chr10	-	5263	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	64	-89	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	112.394348921205	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATCCAAATCATGTAT	NA	False	NA	-114	True	AGTAAA	-14	NA	41179192	41064256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41114744_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139374_41139713_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.3	chr10	-	3302	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	-9	-11	-9	11	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGACTTATTTTAGGAG	NA	False	NA	-14	True	AATAAA	-28	NA	41179265	41064156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.30	chr10	-	3200	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	-9	91	-9	-91	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTCATCCAAATCATGT	NA	False	NA	-116	True	AGTAAA	-12	NA	41179265	41064258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.31	chr10	-	5163	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	46	-27750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.8972404808438	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTATGTGTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	41179210	41091917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41094373_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.32	chr10	-	4205	1	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	47477	-63407	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAGGTACTCAAAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41131779	41127574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41127600_41131800
ES.2656.33	chr10	-	2317	12	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	50	67478	50	-67478	5prime_fragment	FALSE	canonical	3	326	junction_8	28.161869772636	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTGTAGTGAATT	NA	False	NA	NA	False	CATAAA	-14	NA	41179206	41131645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.2656.34	chr10	-	1702	1	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	156	-113231	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41179100	41177398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41177400_41179100
ES.2656.9	chr10	-	3109	23	NNC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.6019692124435	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179074	41064167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109616_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ES.26560.1	chr5	-	212	1	Intergenic	novelGene_22103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGCTGATAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	106944995	106944783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_106944800_106945000
ES.26561.1	chr5	-	210	1	Intergenic	novelGene_22104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTGGGAGAGAACATAT	NA	False	NA	NA	False	NA	NA	NA	106946553	106946343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_106946300_106946600
ES.26562.1	chr5	+	179	1	Intergenic	novelGene_22105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	107043599	107043778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107043600_107043800
ES.26563.1	chr5	-	3912	32	NNC	ENSMUSG00000043410.17	novel	5018	40	NA	NA	993	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	2.74402197653377	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGACTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	107072725	106988064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106988595_106989479_106989632_106990325_106990438_106993250_106993342_106995529_106995770_107000983_107001088_107002606_107002687_107004742_107004859_107005403_107005485_107019646_107019794_107020186_107020291_107021799_107021958_107022708_107022795_107026456_107026589_107026668_107026767_107028164_107028213_107028300_107028408_107029658_107029751_107034376_107034458_107037767_107037816_107040563_107040698_107041315_107041411_107043061_107043208_107043809_107043912_107044096_107044141_107046123_107046213_107046294_107046496_107049570_107049727_107049934_107050013_107052091_107052225_107070678_107070777_107072696
ES.26563.2	chr5	-	4796	38	NNC	ENSMUSG00000043410.17	novel	5018	40	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	2.96953117725846	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGACTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	107074081	106988064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_106988595_106989479_106989632_106990325_106990438_106993250_106993342_106995529_106995770_107000983_107001088_107002606_107002687_107004742_107004859_107005403_107005485_107019646_107019794_107020186_107020291_107021799_107021958_107022068_107022153_107022708_107022795_107026456_107026589_107026668_107026767_107028164_107028213_107028300_107028408_107034376_107034458_107037767_107037816_107040563_107040698_107041315_107041411_107043061_107043208_107043809_107043912_107044096_107044141_107046123_107046213_107046294_107046496_107049570_107049727_107049934_107050013_107052091_107052225_107052611_107052683_107058937_107058986_107059269_107059533_107065189_107065494_107068828_107068943_107070678_107070777_107072696_107072799_107074062
ES.26563.3	chr5	-	5025	2	ISM	ENSMUSG00000043410.17	ENSMUST00000200249.2	1381	10	11732	6741	11732	-6741	internal_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTGTACTTTGTTATT	NA	False	NA	NA	False	AATATA	-16	NA	107061986	107056677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_107058986_107059269
ES.26563.4	chr5	-	2256	6	NIC	ENSMUSG00000043410.17	novel	1440	10	NA	NA	-4	-13794	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	4.22374241638858	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATGTTACTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	107074128	107063730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107065494_107066242_107066356_107068828_107068943_107070678_107070777_107072696_107072799_107074062
ES.26563.5	chr5	-	2059	5	ISM	ENSMUSG00000043410.17	ENSMUST00000112690.10	5018	40	-26	75833	-26	-13959	5prime_fragment	FALSE	canonical	1	1	junction_4	5.53962995154008	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTGCCTTGGTCATTG	NA	False	NA	NA	False	NA	NA	NA	107073782	107063895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_107065494_107066242_107066356_107070678_107070777_107072696_107072799_107073634
ES.26563.6	chr5	-	5422	4	NIC	ENSMUSG00000043410.17	novel	5018	40	NA	NA	-4	-14837	intron_retention	FALSE	canonical	3	9	junction_1	2.94392028877595	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGTTAGCCGTAAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	107074128	107064773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107065494_107066242_107070777_107072696_107072799_107074062
ES.26563.7	chr5	-	1210	6	NIC	ENSMUSG00000043410.17	novel	1440	10	NA	NA	-4	-14840	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	4.22374241638858	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTCTAGTTAGCCGTAA	NA	False	NA	NA	False	AATAAA	-13	NA	107074128	107064776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107065494_107066242_107066356_107068828_107068943_107070678_107070777_107072696_107072799_107074062
ES.26564.1	chr5	-	174	1	Intergenic	novelGene_22106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGGTAATGGTT	NA	False	NA	NA	False	NA	NA	NA	107091280	107091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107091100_107091300
ES.26565.1	chr5	-	5544	2	Intergenic	novelGene_22107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAGATTTACACAAGCC	NA	False	NA	NA	False	AATAAA	-45	NA	107112139	107105684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107107805_107108715
ES.26566.1	chr5	+	2987	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	-20	-6	-20	6	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112167	107132304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.10	chr5	+	3916	11	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	13	0	intron_retention	FALSE	canonical	3	169	junction_8	39.1587793476763	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112200	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107124579_107127160_107127311_107130829
ES.26566.11	chr5	+	2078	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	14	869	14	208	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTTAGTGTCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	107112201	107131429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.12	chr5	+	2857	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	14	-7	14	6	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112201	107132304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.13	chr5	+	5246	14	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	108.707685775871	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112201	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107124723_107125634_107125686_107127311_107130829_107130921_107131002
ES.26566.14	chr5	+	5925	11	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	16	-517	intron_retention	FALSE	canonical	2	20	junction_9	80.4984471899924	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTTTTCTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	107112203	107131780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107125634_107125686_107127311_107130829
ES.26566.15	chr5	+	4338	11	NNC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	16	0	intron_retention	FALSE	canonical	2	6	junction_8	106.744976462595	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112203	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107123851_107123878_107124495_107124579_107127160_107127311_107130829
ES.26566.16	chr5	+	4162	9	NIC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	16	0	intron_retention	FALSE	canonical	1	3	junction_8	91.2565066173366	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112203	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107130829
ES.26566.17	chr5	+	3731	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	16	-786	16	786	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTTAGGTCAGGACTT	NA	False	NA	NA	False	NA	NA	NA	107112203	107133084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.18	chr5	+	2952	12	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	78.3208066884565	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112204	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116819_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.19	chr5	+	3530	11	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	17	6	intron_retention	FALSE	canonical	3	169	junction_7	35.5870763058726	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112204	107132304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.2	chr5	+	4452	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	-12	-1479	-12	1479	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	107112175	107133777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.20	chr5	+	5009	9	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	26	-2	intron_retention	FALSE	canonical	3	232	junction_6	21.9715725427198	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112213	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.21	chr5	+	2129	7	ISM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	28	9241	28	-2	5prime_fragment	FALSE	canonical	3	259	junction_6	15.0489940601431	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTAAATTTTAATGTT	NA	False	NA	NA	False	AATAAA	-22	NA	107112215	107123056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642
ES.26566.22	chr5	+	2868	12	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	80.8737410008408	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112216	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120851_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.23	chr5	+	4594	7	NNC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.819627174578	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112219	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112280_107112798_107112981_107116723_107116808_107117024_107117767_107125199_107125634_107125686_107127311_107130829
ES.26566.24	chr5	+	4688	10	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-26	2	intron_retention	FALSE	non_canonical	0	0	junction_9	88.0157112798548	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATACTTATTTAAAGA	NA	False	NA	12	True	AATAAA	-17	NA	107112220	107132300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107124579_107127160_107127311_107130828
ES.26566.25	chr5	+	2809	11	FSM	ENSMUSG00000029283.18	ENSMUST00000076467.13	2785	11	-26	2	-26	-1	multi-exon	FALSE	canonical	3	21	junction_9	99.5953814190196	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112220	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127181_107127311_107130829
ES.26566.26	chr5	+	3569	12	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	79.5389607738983	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112221	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107123851_107124579_107127160_107127311_107130829
ES.26566.27	chr5	+	5266	9	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-23	4	intron_retention	FALSE	canonical	3	249	junction_8	17.7794649807018	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATACTTATTTAAAGAGT	NA	False	NA	14	True	AATAAA	-19	NA	107112223	107132302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107124579_107127160_107127311_107130829
ES.26566.29	chr5	+	3362	10	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-22	8	intron_retention	FALSE	canonical	1	3	junction_9	88.7665825231517	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATTTAAAGAGTAATA	NA	False	NA	18	True	AATAAA	-23	NA	107112224	107132306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107122563_107123350_107123527_107124495_107124579_107130829
ES.26566.3	chr5	+	3743	11	FSM	ENSMUSG00000029283.18	ENSMUST00000140378.8	3679	11	-65	1	5	0	multi-exon	FALSE	canonical	3	199	junction_7	28.5629130167075	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112192	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.30	chr5	+	2994	13	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.160253868377	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112234	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107122774_107122877_107123350_107123527_107124495_107124579_107127181_107127311_107130829
ES.26566.31	chr5	+	3078	13	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	100.199245949702	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112234	107132303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107122774_107122934_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.32	chr5	+	2889	12	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	76.50290331011	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATCAGAATACTTATT	NA	False	NA	6	True	AATAAA	-11	NA	107112234	107132294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127181_107127311_107130829
ES.26566.33	chr5	+	5357	9	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	1	junction_1	91.498633869583	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112235	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112402_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107124579_107127160_107127311_107130829
ES.26566.34	chr5	+	4295	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	48	-1479	-11	1478	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTCTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	107112235	107133776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.35	chr5	+	2731	10	NIC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	102.489023802552	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112236	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.36	chr5	+	4296	10	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-10	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	87.0708523751395	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112236	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124477_107124579_107127160_107127311_107130829
ES.26566.37	chr5	+	4466	11	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_8	83.5885159576362	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112236	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107124162_107124363_107124579_107127160_107127311_107130829
ES.26566.38	chr5	+	4189	9	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	3	junction_7	91.2783346419072	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112242	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107127160_107127311_107130829
ES.26566.39	chr5	+	3778	10	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	29	junction_7	78.1472178284102	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112243	107132298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107124579_107127160_107127311_107130829
ES.26566.4	chr5	+	4332	10	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	5	8	intron_retention	FALSE	canonical	3	232	junction_7	20.9290394275042	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATTTAAAGAGTAATA	NA	False	NA	18	True	AATAAA	-23	NA	107112192	107132306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.40	chr5	+	3011	13	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	100.397819808112	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112243	107132298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107124723_107124830_107127160_107127311_107130829
ES.26566.41	chr5	+	4184	9	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_2	86.5675314422215	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112245	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112292_107112798_107112981_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.42	chr5	+	2982	12	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	81.0140279659808	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112273	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112402_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.43	chr5	+	3242	11	ISM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	223	3	-16	-2	3prime_fragment	FALSE	canonical	3	169	junction_7	39.3879423174149	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112410	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.44	chr5	+	3151	12	FSM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	-15	-7	-15	6	multi-exon	FALSE	canonical	3	16	junction_1	77.2190187680738	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTTAAAGAGTAA	NA	False	NA	16	True	AATAAA	-21	NA	107112411	107132304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.45	chr5	+	4485	10	NIC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	-9	0	intron_retention	FALSE	canonical	3	16	junction_1	106.282642044691	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112417	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127181_107127311_107130829
ES.26566.46	chr5	+	4497	10	NIC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	16	junction_1	81.7246204044223	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112425	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.47	chr5	+	3674	11	NNC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_1	84.6945098574872	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112426	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112700_107112831_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.48	chr5	+	3915	11	NIC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	16	junction_1	78.4744544421941	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112426	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.49	chr5	+	3151	13	NNC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	110.704655879206	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107112428	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107123851_107123878_107124495_107124579_107127160_107127311_107130829
ES.26566.5	chr5	+	7130	10	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	5	0	intron_retention	TRUE	non_canonical	0	0	junction_7	111.15932287365	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112192	107132298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107124119_107124810_107125634_107125686_107127311_107130829
ES.26566.50	chr5	+	2994	11	NIC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	115.045903881885	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCAGAATACTTATTTA	NA	False	NA	8	True	AATAAA	-13	NA	107112443	107132296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127181_107127311_107130829
ES.26566.51	chr5	+	2455	8	ISM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	8185	0	-1800	0	3prime_fragment	FALSE	canonical	3	169	junction_4	33.8670871472103	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107120611	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.52	chr5	+	7944	3	NNC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	-1624	5	intron_retention	FALSE	canonical	2	20	junction_1	114.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107120787	107132303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107125634_107125686_107127311_107130829
ES.26566.53	chr5	+	3835	5	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	-1549	-2	intron_retention	FALSE	canonical	3	169	junction_2	36.834087473426	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATACTTATTT	NA	False	NA	7	True	AATAAA	-12	NA	107120862	107132295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107120934_107121642_107122563_107123350_107124579_107127160_107127311_107130829
ES.26566.54	chr5	+	2967	4	NNC	ENSMUSG00000029283.18	novel	3129	12	NA	NA	-134	0	intron_retention	FALSE	canonical	0	0	junction_2	113.58501466107	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107122277	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107123527_107124495_107124579_107127143_107127311_107130829
ES.26566.55	chr5	+	3200	2	ISM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	13152	0	2475	0	3prime_fragment	FALSE	canonical	3	249	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107125578	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107127311_107130829
ES.26566.56	chr5	+	2318	1	NIC	ENSMUSG00000029283.18	novel	2864	11	NA	NA	3288	1520	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107126391	107128709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107126400_107128700
ES.26566.57	chr5	+	5008	1	Genic_Genomic	ENSMUSG00000029283.18	novel	NA	NA	NA	NA	4191	4	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATACTTATTTAAAGAGT	NA	False	NA	14	True	AATAAA	-19	NA	107127294	107132302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_107127300_107132300
ES.26566.6	chr5	+	2966	13	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	5	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	115.004438320151	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTATTTAAAGAGTA	NA	False	NA	15	True	AATAAA	-20	NA	107112192	107132303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120851_107120934_107121642_107121887_107122466_107122563_107122774_107122841_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26566.7	chr5	+	3457	12	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	10	8	intron_retention	FALSE	canonical	1	4	junction_11	80.4141141346848	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATTTAAAGAGTAATA	NA	False	NA	18	True	AATAAA	-23	NA	107112197	107132306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829_107130921_107131002
ES.26566.8	chr5	+	2866	13	NNC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	77.6149237510989	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112199	107132297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829_107130921_107131002
ES.26566.9	chr5	+	3420	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	13	-472	13	472	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACATGTTTTCACTCAA	NA	False	NA	NA	False	ATTAAA	-16	NA	107112200	107132770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ES.26567.1	chr5	-	223	1	Intergenic	novelGene_22108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAGAAAAAGAAAAA	4898	False	NA	NA	False	NA	NA	NA	107125718	107125495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107125500_107125700
ES.26568.1	chr5	-	176	1	Intergenic	novelGene_22109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAATATGATTACT	NA	False	NA	NA	False	NA	NA	NA	107143525	107143349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107143300_107143500
ES.26569.1	chr5	+	175	1	Intergenic	novelGene_22110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	107166136	107166311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107166100_107166300
ES.2657.1	chr10	+	203	1	Intergenic	novelGene_2023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTACACCTTTAAAA	NA	False	NA	NA	False	AAGAAA	-5	NA	41197164	41197367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41197200_41197400
ES.26570.1	chr5	+	176	1	Intergenic	novelGene_22111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGGAC	NA	False	NA	2	True	NA	NA	NA	107285946	107286122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107285900_107286100
ES.26571.1	chr5	+	180	1	Intergenic	novelGene_22113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	107395011	107395191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107395000_107395200
ES.26572.1	chr5	-	6117	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	-26	-4	-26	4	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATCTGGTCATCACT	251	False	NA	-1	True	AATAAA	-24	NA	107437521	107254431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ES.26572.2	chr5	-	6003	16	NNC	ENSMUSG00000029287.15	novel	6087	17	NA	NA	38578	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	6.86893166527534	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATGTCATATCTGGT	7490	False	NA	-8	True	AATAAA	-17	NA	107398883	107254438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107398432
ES.26572.5	chr5	-	5798	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	38	251	4	-251	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTATTATCAGTTTCC	315	False	NA	NA	False	ATTAAA	-21	NA	107437457	107254686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ES.26572.6	chr5	-	3258	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	48	2781	14	-70	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTTTTTTTTTTTAT	325	False	NA	NA	False	NA	NA	NA	107437447	107257216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ES.26572.7	chr5	-	4135	12	ISM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	26	28516	-8	12894	5prime_fragment	FALSE	canonical	3	17	junction_3	3.09892009982897	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAAGAGCCATTTCTT	303	False	NA	NA	False	AATAAA	-20	NA	107437469	107282951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ES.26572.8	chr5	-	163	1	Intergenic	novelGene_22112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	107319472	107319309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107319300_107319500
ES.26573.1	chr5	+	159	1	Intergenic	novelGene_22114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	3735	False	NA	NA	False	NA	NA	NA	107441684	107441843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107441700_107441800
ES.26574.1	chr5	-	176	1	Intergenic	novelGene_22115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAACACTGATTTCA	NA	False	NA	NA	False	NA	NA	NA	107458776	107458600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107458600_107458800
ES.26575.1	chr5	-	158	1	Intergenic	novelGene_22116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107501414	107501256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107501300_107501400
ES.26576.1	chr5	-	178	1	Intergenic	novelGene_22117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGTGAGGCCTT	NA	False	NA	NA	False	NA	NA	NA	107538015	107537837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107537800_107538000
ES.26577.1	chr5	+	1282	7	FSM	ENSMUSG00000033805.13	ENSMUST00000049146.12	1279	7	-9	6	-9	-6	multi-exon	FALSE	canonical	0	0	junction_6	2.26691175145591	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCAGTGTAATTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	107551352	107577895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107551642_107553897_107553984_107560881_107561040_107561363_107561493_107567641_107567746_107574665_107574815_107577528
ES.26578.1	chr5	-	7092	1	Antisense	novelGene_ENSMUSG00000033805.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACTTATTCCAGGAACC	NA	False	NA	NA	False	AATGAA	-38	NA	107569062	107561970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_107562000_107569100
ES.26579.1	chr5	+	5975	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-103	613	-103	0	5prime_fragment	FALSE	canonical	2	10	junction_13	5.58142846859117	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAAATGTTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	107585759	107658074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.26579.10	chr5	+	5780	16	NIC	ENSMUSG00000111375.5	novel	5256	18	NA	NA	-35	11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	6.83585319392458	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTTTTTCCATCTTA	NA	False	NA	NA	False	AATAAA	-32	NA	107585827	107658085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.26579.11	chr5	+	5083	16	NIC	ENSMUSG00000111375.5	novel	5256	18	NA	NA	-32	108	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.89010469629644	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGTCTTTTAATTTA	NA	False	NA	18	True	AATACA	-15	NA	107585830	107658795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107586012_107599854_107600052_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ES.26579.12	chr5	+	4265	16	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-12	3977	-12	-246	5prime_fragment	FALSE	canonical	2	10	junction_13	5.76425768565794	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTACTTTGCATTTCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	107585850	107654710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856
ES.26579.13	chr5	+	3730	5	ISM	ENSMUSG00000111375.5	ENSMUST00000100951.9	4545	7	5959	282	-606	104	3prime_fragment	FALSE	canonical	2	4	junction_4	4.32290411644765	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGGAGTCTTTTAA	NA	False	NA	14	True	AATACA	-11	NA	107651202	107658791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ES.26579.2	chr5	+	2543	3	ISM	ENSMUSG00000111375.5	ENSMUST00000162298.4	1408	6	-80	17532	-80	-17532	5prime_fragment	FALSE	canonical	3	27	junction_1	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATTTGTATCTCATT	NA	False	NA	NA	False	AGTAAA	-16	NA	107585782	107601973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107586012_107593728_107593924_107599854
ES.26579.3	chr5	+	5443	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-80	-107	-80	107	multi-exon	FALSE	canonical	2	4	junction_17	6.08645896223428	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGAGTCTTTTAATTT	NA	False	NA	17	True	AATACA	-14	NA	107585782	107658794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ES.26579.4	chr5	+	6950	17	NIC	ENSMUSG00000111375.5	novel	5256	18	NA	NA	-75	1351	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	7.00864421625181	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATACGTGGGCTTTTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	107585787	107660424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107586012_107593728_107593924_107599854_107600052_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ES.26579.5	chr5	+	6942	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-66	-391	-66	5	intron_retention	FALSE	canonical	2	10	junction_13	5.58142846859117	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCAGTCTGTGAATAA	NA	False	NA	NA	False	AATAAA	-25	NA	107585796	107659078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.26579.6	chr5	+	5713	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-66	-391	-66	5	multi-exon	FALSE	canonical	2	4	junction_17	6.08645896223428	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCAGTCTGTGAATAA	NA	False	NA	NA	False	AATAAA	-25	NA	107585796	107659078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ES.26579.7	chr5	+	6610	15	NIC	ENSMUSG00000111375.5	novel	5256	18	NA	NA	-47	5	intron_retention	FALSE	canonical	0	0	junction_1	5.70221940321915	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCAGTCTGTGAATAA	NA	False	NA	NA	False	AATAAA	-25	NA	107585815	107659078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107586012_107599854_107600052_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.26579.8	chr5	+	6623	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	-35	-103	-35	103	intron_retention	FALSE	canonical	2	10	junction_13	5.58142846859117	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGATGGAGTCTTTTA	NA	False	NA	13	True	AATACA	-10	NA	107585827	107658790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.26579.9	chr5	+	5898	17	NNC	ENSMUSG00000111375.5	novel	5256	18	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.35382512743308	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTGTAAAAATGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	107585827	107658072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107586012_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107636038_107636227_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
ES.2658.1	chr10	+	172	1	Intergenic	novelGene_2024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCTAGTGGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	41232984	41233156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41233000_41233200
ES.2658.2	chr10	+	300	1	Intergenic	novelGene_2025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTAGTAAAACTTG	NA	False	NA	NA	False	AATAAA	-11	NA	41232985	41233285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41233000_41233300
ES.26580.1	chr5	+	5618	5	NIC	ENSMUSG00000089798.11	novel	3096	7	NA	NA	7	0	intron_retention	FALSE	canonical	2	4	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACTTTTATATAGCA	NA	False	NA	NA	False	AATAAA	-13	NA	107682592	107699408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107682675_107686995_107687090_107691785_107693723_107694066_107694146_107695982
ES.26580.2	chr5	+	747	3	NNC	ENSMUSG00000089798.11	novel	5249	3	NA	NA	6	-7761	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGCTATGCTGCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	107682608	107688482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107682675_107686995_107687090_107687895
ES.26580.3	chr5	+	1369	3	NIC	ENSMUSG00000089798.11	novel	3096	7	NA	NA	-7	1086	intron_retention	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGACTGAATCTTCAG	NA	False	NA	NA	False	AATAAA	-22	NA	107682615	107698166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107682675_107686995_107687090_107696950
ES.26581.1	chr5	+	2649	12	NIC	ENSMUSG00000033773.15	novel	2992	12	NA	NA	-70	-242	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	59.3379451576914	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTTCCAAAACTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	107745168	107790546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745461_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107789819
ES.26581.10	chr5	+	1183	10	NIC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	49.4098505698341	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGACATTGCTGACTGC	NA	False	NA	37	True	AATAAA	-30	NA	107745586	107809715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107780928_107780998_107803022_107803177_107809346
ES.26581.11	chr5	+	3923	12	NIC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	-4	intron_retention	FALSE	canonical	3	138	junction_1	12.6941126459382	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACTTTTTCAGAAGCT	NA	False	NA	22	True	AATAAA	-15	NA	107745586	107809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.12	chr5	+	3631	4	NIC	ENSMUSG00000033773.15	novel	2914	12	NA	NA	2	-1615	intron_retention	FALSE	canonical	3	138	junction_1	12.2565175405668	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107745588	107753239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745727_107746387_107746434_107749596_107751491_107751686
ES.26581.13	chr5	+	2317	14	NNC	ENSMUSG00000033773.15	novel	2321	13	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.0965988484762	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTTTTTCAGAAGCTG	NA	False	NA	23	True	AATAAA	-16	NA	107745588	107809701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745727_107746387_107746434_107749596_107749726_107749821_107749848_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.15	chr5	+	2133	7	ISM	ENSMUSG00000033773.15	ENSMUST00000112654.8	2914	12	11	23197	-7	12737	5prime_fragment	FALSE	canonical	3	138	junction_1	9.8952850725316	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGGACAGAAATTCTT	NA	False	NA	NA	False	TATAAA	-14	NA	107745593	107767591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006
ES.26581.16	chr5	+	3957	12	NIC	ENSMUSG00000033773.15	novel	2321	13	NA	NA	-6	3	intron_retention	FALSE	canonical	3	138	junction_1	12.6523770346959	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAGAAGCTGACATTG	NA	False	NA	29	True	AATAAA	-22	NA	107745594	107809707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745727_107746387_107746434_107749596_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.17	chr5	+	3449	7	ISM	ENSMUSG00000033773.15	ENSMUST00000112655.8	2686	12	-25	21860	14	14074	intron_retention	FALSE	canonical	3	138	junction_1	9.8952850725316	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACTGGATGTATCTGTT	NA	False	NA	NA	False	NA	NA	NA	107745614	107768928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006
ES.26581.18	chr5	+	2599	13	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	5	-924	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.9279111482909	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCATTTGTCAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	107745644	107808780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107808047
ES.26581.19	chr5	+	2294	14	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	43	16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	55.7693899201973	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCTGACTGCCGAGC	NA	False	NA	42	True	AATAAA	-35	NA	107745682	107809720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107761432_107761525_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.2	chr5	+	2306	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-29	-9	10	9	multi-exon	FALSE	canonical	3	138	junction_1	12.1951720866178	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGACATTGCTGACT	NA	False	NA	35	True	AATAAA	-28	NA	107745571	107809713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.20	chr5	+	2359	14	NNC	ENSMUSG00000033773.15	novel	514	6	NA	NA	18	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.761358053326	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTGATCGTCAGTG	NA	False	NA	2	True	NA	NA	NA	107745865	107809680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745952_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107753483_107753639_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.21	chr5	+	2181	8	NNC	ENSMUSG00000033773.15	novel	2992	12	NA	NA	7641	-242	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.9137289719278	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGCTTCCAAAACTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	107753488	107790546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107753639_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107789819
ES.26581.22	chr5	+	335	1	Intergenic	novelGene_22120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAGTAAATTGTATA	332	False	NA	NA	False	NA	NA	NA	107755430	107755765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107755400_107755800
ES.26581.3	chr5	+	1215	7	ISM	ENSMUSG00000033773.15	ENSMUST00000112654.8	2914	12	-5	24131	-5	11803	5prime_fragment	FALSE	canonical	3	138	junction_1	9.8952850725316	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAGTTTCTTTCAGCTT	NA	False	NA	NA	False	TATAAA	-5	NA	107745577	107766657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006
ES.26581.4	chr5	+	3805	11	NNC	ENSMUSG00000033773.15	novel	2321	13	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_1	47.9995833315249	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACTTTTTCAGAAGCT	NA	False	NA	22	True	AATAAA	-15	NA	107745577	107809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745611_107749596_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.5	chr5	+	2154	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	-23	137	-5	-137	multi-exon	FALSE	canonical	3	138	junction_1	12.1951720866178	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTACCTTTATTCTTTT	NA	False	NA	NA	False	AATGAA	-38	NA	107745577	107809567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.6	chr5	+	3884	13	NNC	ENSMUSG00000033773.15	novel	2321	13	NA	NA	0	-4	intron_retention	FALSE	canonical	2	7	junction_1	42.155383865989	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACTTTTTCAGAAGCT	NA	False	NA	22	True	AATAAA	-15	NA	107745586	107809700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745611_107745684_107745727_107746387_107746434_107749596_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.7	chr5	+	2167	13	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	43.2540139434738	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCAGAAGCTGACAT	NA	False	NA	27	True	AATAAA	-20	NA	107745586	107809705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745611_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.8	chr5	+	2073	14	NNC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	-135	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	40.5455401789441	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCTTTATTCTTTTTG	NA	False	NA	NA	False	AATGAA	-40	NA	107745586	107809569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_107745611_107745684_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ES.26581.9	chr5	+	2137	12	NIC	ENSMUSG00000033773.15	novel	2268	13	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	43.716781958344	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGACATTGCTGACT	NA	False	NA	35	True	AATAAA	-28	NA	107745586	107809713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107809346
ES.26582.1	chr5	-	174	1	Intergenic	novelGene_22118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTAAATTCA	4209	False	NA	NA	False	NA	NA	NA	107683798	107683624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107683600_107683800
ES.26583.1	chr5	-	2119	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	-7	-97	-7	97	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGGAGAGATCAC	NA	False	NA	NA	False	AGTAAA	-14	NA	107745512	107696735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.12	chr5	-	3874	18	NNC	ENSMUSG00000029276.14	novel	2042	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	83.4006049117989	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTCATTATACTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	107745434	107696889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107697042_107697256_107697337_107698833_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.13	chr5	-	3893	18	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	26	-1	intron_retention	FALSE	canonical	3	217	junction_14	25.384108043744	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTCATTATACTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	107745479	107696890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.14	chr5	-	3001	3	NNC	ENSMUSG00000029276.14	novel	676	3	NA	NA	-2333	-3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	124.5	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTTCATTATACTT	NA	False	NA	NA	False	AATAAA	-12	NA	107701609	107696892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107697042_107697256_107697337_107698837
ES.26583.15	chr5	-	1248	15	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-11	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	72.3896767924989	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAACAAAATG	NA	False	NA	NA	False	AGTAAA	-14	NA	107745454	107696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.17	chr5	-	1768	18	NNC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	6	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.2273939056802	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAACAAAATG	NA	False	NA	NA	False	AGTAAA	-14	NA	107745499	107696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107697042_107697256_107697301_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.18	chr5	-	4879	10	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-15075	-21	intron_retention	FALSE	canonical	3	239	junction_7	23.8560497801105	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAACAAAATG	9740	False	NA	NA	False	AGTAAA	-14	NA	107714351	107696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107710142_107710616
ES.26583.19	chr5	-	1760	18	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	13	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	81.9762392783932	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACCAACAAAATG	NA	False	NA	NA	False	AGTAAA	-14	NA	107745492	107696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.2	chr5	-	2063	19	NIC	ENSMUSG00000029276.14	novel	2042	19	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	2	35	junction_18	58.3533299059369	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATTGCATAATTCT	NA	False	NA	NA	False	CATAAA	-24	NA	107745401	107696835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745254
ES.26583.21	chr5	-	5185	17	NNC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	3	-24	intron_retention	FALSE	canonical	0	0	junction_16	69.4845981135388	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAATAAAAACCAACAAA	NA	False	NA	NA	False	AGTAAA	-11	NA	107745502	107696913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744719_107745409
ES.26583.22	chr5	-	3624	1	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-2533	-1296	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATTCAGTCACATATC	NA	False	NA	NA	False	AATAAA	-11	NA	107701809	107698185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107698200_107701800
ES.26583.23	chr5	-	6610	3	NNC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-14389	-9645	intron_retention	TRUE	canonical	0	0	junction_1	123.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACCTTATAGTTGCCTG	7453	False	NA	NA	False	NA	NA	NA	107713665	107706534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107707608_107707653_107710142_107710616
ES.26583.24	chr5	-	6870	2	NIC	ENSMUSG00000029276.14	novel	1759	17	NA	NA	-14603	-9645	intron_retention	FALSE	canonical	3	247	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACCTTATAGTTGCCTG	7239	False	NA	NA	False	NA	NA	NA	107713879	107706534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107710142_107710616
ES.26583.25	chr5	-	5459	13	NNC	ENSMUSG00000029276.14	novel	815	7	NA	NA	31	-9645	intron_retention	FALSE	canonical	0	0	junction_1	93.8149404708843	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACCTTATAGTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	107745474	107706534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107707608_107707653_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.26	chr5	-	6743	4	NNC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	6	-11922	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.673333142868	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCCTTGTTTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	107745499	107735108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107739990_107740047_107741745_107744653_107744729_107745409
ES.26583.27	chr5	-	4899	1	Intergenic	novelGene_22119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107740036	107735137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107735100_107740000
ES.26583.3	chr5	-	2035	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	56.5136550744733	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAGAAAAATTGCATA	NA	False	NA	NA	False	CATAAA	-19	NA	107745509	107696840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723231_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.4	chr5	-	2010	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	-4	9	-4	-7	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTACTAGAAAAATTGCAT	NA	False	NA	NA	False	CATAAA	-18	NA	107745509	107696841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.6	chr5	-	1832	18	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-14	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.2273939056802	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTACTAGAAAAATTGC	NA	False	NA	NA	False	CATAAA	-16	NA	107745457	107696843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26583.7	chr5	-	2010	2	ISM	ENSMUSG00000029276.14	ENSMUST00000137939.8	676	3	175	-11	175	11	intron_retention	FALSE	canonical	3	273	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATACCACCATAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	107699101	107696876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_107697042_107697256
ES.26583.8	chr5	-	2132	19	NIC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	63.7616123531749	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATACTTTATACCACCA	NA	False	NA	NA	False	AATAAA	-22	NA	107745420	107696882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745157
ES.26583.9	chr5	-	1892	19	NNC	ENSMUSG00000029276.14	novel	2015	19	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	64.3508180039522	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCATTATACTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	107745477	107696888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107697042_107697256_107697301_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ES.26584.1	chr5	+	4495	1	Intergenic	novelGene_22122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGCACTGTTTATATAA	NA	False	NA	NA	False	NA	NA	NA	107930654	107935149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107930700_107935100
ES.26585.1	chr5	+	1603	1	Intergenic	novelGene_22124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTTTGTCTGAGATTT	NA	False	NA	NA	False	NA	NA	NA	107976146	107977749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_107976100_107977700
ES.26586.1	chr5	+	177	2	Intergenic	novelGene_22125	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTGTCTTGGTCAT	4634	False	NA	NA	False	NA	NA	NA	108005846	108067312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108005993_108067281
ES.26586.10	chr5	+	1917	7	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	20	-1	intron_retention	FALSE	canonical	3	7026	junction_3	376.251688811271	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTGTGTTAAGCT	NA	False	NA	-3	True	AATAAA	-15	NA	108048387	108055915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108052761_108055054_108055144_108055762
ES.26586.11	chr5	+	1058	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	37	950	-33	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGCTGTTATT	NA	False	NA	3	True	AATAAA	-21	NA	108048404	108055921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26586.12	chr5	+	1045	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2575.06198855444	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTGTGTTAAGCT	NA	False	NA	-3	True	AATAAA	-15	NA	108048406	108055915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055148_108055771
ES.26586.14	chr5	+	2136	10	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-28	39834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3111.7633721012	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAGGGTTCAGTATCTA	NA	False	NA	NA	False	NA	NA	NA	108048409	108096705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762_108056869_108058724_108058803_108096647
ES.26586.15	chr5	+	900	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	353	junction_5	2481.0635639103	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTGTGTTAAGCT	NA	False	NA	-3	True	AATAAA	-15	NA	108048411	108055915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051590_108052582_108052761_108055054_108055144_108055762
ES.26586.17	chr5	+	3177	5	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-3	1	intron_retention	FALSE	canonical	3	7026	junction_1	413.186020455678	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGTGTTAAGCTGT	NA	False	NA	-1	True	AATAAA	-17	NA	108048434	108055917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108050004_108051134_108051270_108051531_108052761_108055054_108055144_108055762
ES.26586.2	chr5	+	2339	2	Antisense	novelGene_ENSMUSG00000011831.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGACGTGACAAAATATA	5430	False	NA	NA	False	NA	NA	NA	108006642	108009065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108007709_108007792
ES.26586.20	chr5	+	1974	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	70	1	0	-1	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTGGCATTCTTAAT	NA	False	NA	23	True	AATAAA	-17	NA	108048437	108056870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26586.21	chr5	+	2502	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	71	-528	1	528	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCCCGAATTTCACT	NA	False	NA	NA	False	AATAAA	-12	NA	108048438	108057399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26586.22	chr5	+	1006	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2639.46340403206	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGTTAAGCTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	108048446	108055919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051262_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26586.26	chr5	+	982	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_6	2617.37048292708	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108048469	108055916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055060_108055144_108055762
ES.26586.28	chr5	+	1936	8	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_6	2617.37048292708	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTGGCATTCTTAAT	NA	False	NA	23	True	AATAAA	-17	NA	108048469	108056870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055060_108055144_108055762
ES.26586.3	chr5	+	179	1	Intergenic	novelGene_22126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCACTGTGAAG	8652	False	NA	NA	False	NA	NA	NA	108009864	108010043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108009900_108010000
ES.26586.31	chr5	+	1385	8	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	62	2	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	2625.0489752477	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTTAAGCTGTT	NA	False	NA	0	True	AATAAA	-18	NA	108048499	108055918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108048938_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26586.33	chr5	+	2901	3	FSM	ENSMUSG00000058558.13	ENSMUST00000140659.2	1024	3	-1875	-2	118	2	multi-exon	FALSE	canonical	3	7486	junction_1	330	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTTAAGCTGTT	NA	False	NA	0	True	AATAAA	-18	NA	108050104	108055918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108052761_108055054_108055144_108055762
ES.26586.34	chr5	+	2791	3	NIC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	581	-2	intron_retention	FALSE	canonical	3	7297	junction_1	94.5	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTTCTGTGTTAAGC	NA	False	NA	-4	True	AATAAA	-14	NA	108050567	108055914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108051270_108051531_108052761_108055054
ES.26586.35	chr5	+	565	4	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	-397	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3694.33668681613	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTGTGTTAAGCT	NA	False	NA	-3	True	AATAAA	-15	NA	108051582	108055915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108051728_108052582_108052761_108055054_108055144_108055762
ES.26586.36	chr5	+	1879	3	NNC	ENSMUSG00000058558.13	novel	815	2	NA	NA	1244	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4073	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTGGCATTCTTAAT	NA	False	NA	23	True	AATAAA	-17	NA	108053223	108056870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108053338_108054486_108055144_108055762
ES.26586.37	chr5	+	654	2	FSM	ENSMUSG00000058558.13	ENSMUST00000151767.2	815	2	155	6	155	-1	multi-exon	FALSE	canonical	3	8146	junction_1	0	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCTGTGTTAAGCT	NA	False	NA	-3	True	AATAAA	-15	NA	108054642	108055915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108055144_108055762
ES.26586.38	chr5	+	180	1	Intergenic	novelGene_22133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTGTCTTGGTCAT	752	False	NA	NA	False	NA	NA	NA	108067132	108067312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108067100_108067300
ES.26586.39	chr5	+	171	1	Intergenic	novelGene_22134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGCTCACATAG	8157	False	NA	NA	False	NA	NA	NA	108096102	108096273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108096100_108096300
ES.26586.4	chr5	+	327	1	Intergenic	novelGene_22127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCGCGCAAAGATTAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	108015743	108016070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108015700_108016100
ES.26586.5	chr5	+	168	2	Intergenic	novelGene_22128	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGCTCACATA	NA	False	NA	NA	False	NA	NA	NA	108027310	108096272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108027342_108096135
ES.26586.6	chr5	+	163	1	Intergenic	novelGene_22129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATAATTAA	NA	False	NA	NA	False	NA	NA	NA	108030086	108030249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108030100_108030200
ES.26586.7	chr5	+	195	1	Intergenic	novelGene_22130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAAGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	108041899	108042094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108041900_108042100
ES.26586.9	chr5	+	1188	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	18	839	18	111	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAACCTACCACTGGTGG	NA	False	NA	114	True	NA	NA	NA	108048385	108056032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ES.26587.1	chr5	+	138	1	Intergenic	novelGene_22135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	108105218	108105356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108105200_108105400
ES.26588.1	chr5	+	4991	2	Antisense	novelGene_ENSMUSG00000029270.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108110616	108115665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108113857_108113914
ES.26589.1	chr5	+	318	1	Intergenic	novelGene_22137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108117914	108118232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108117900_108118200
ES.26589.2	chr5	+	157	1	Intergenic	novelGene_22136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108117914	108118071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108117900_108118100
ES.2659.1	chr10	+	140	1	Intergenic	novelGene_2026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41260325	41260465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41260300_41260500
ES.26590.1	chr5	-	3534	18	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	121	6701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.7177548540888	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAAGTGTCGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	108016913	107885959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107887170_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.11	chr5	-	6231	20	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	56.879909456002	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108017004	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943591_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.17	chr5	-	5919	17	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	52.4307579098376	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATGTCCTTAGATTA	NA	False	NA	-3	True	ATTAAA	-17	NA	108017006	107892662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.18	chr5	-	6004	20	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	118	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	56.1088178986457	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATGTCCTTAGATTA	NA	False	NA	-3	True	ATTAAA	-17	NA	108016916	107892662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896160_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.2	chr5	-	6204	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-92	4	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCCTTAGATTATTAACT	NA	False	NA	3	True	ATTAAA	-23	NA	108017126	107892656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.21	chr5	-	6104	20	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	-130	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.7099525485741	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTATGTCCTTAGATT	NA	False	NA	-4	True	ATTAAA	-16	NA	108016895	107892663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947085_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.22	chr5	-	6031	19	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-102	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	63.2761925467223	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016867	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107967671_107967766_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.23	chr5	-	6016	17	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	34	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	47.5758851073735	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108017000	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.25	chr5	-	6161	20	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	-80	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	57.2031419240533	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016845	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967611_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.27	chr5	-	6041	20	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	37	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	64.3459744827364	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016997	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896160_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947085_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.29	chr5	-	5884	18	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-91	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.4838890907578	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016856	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947085_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.30	chr5	-	6155	20	NNC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	127	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	72.3313397821542	380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATGTCCTTAGAT	NA	False	NA	-5	True	ATTAAA	-15	NA	108016907	107892664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107967671_107967766_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.32	chr5	-	5907	19	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	118	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.8630222474964	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATTTTATGTCCTTAG	NA	False	NA	-7	True	ATTAAA	-13	NA	108016916	107892666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107894744_107894820_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.33	chr5	-	3443	10	NIC	ENSMUSG00000011831.17	novel	2149	8	NA	NA	-2609	-1208	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	55.6552438934509	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGTCCTATAGGATAC	7541	False	NA	NA	False	TATAAA	-13	NA	107960257	107893868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223
ES.26590.34	chr5	-	4245	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	53	671	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGTCTGCAGAGACT	NA	False	NA	NA	False	AATACA	-13	NA	108016981	107894470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.35	chr5	-	4054	18	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	32	623	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.1204776886357	371	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCTTTTTAGCTCCCT	NA	False	NA	NA	False	ATTAAA	-21	NA	108017002	107894518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896160_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.36	chr5	-	3929	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-144	158	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCAGACTTTTT	NA	False	NA	NA	False	CATAAA	-20	NA	108017178	107894983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.37	chr5	-	3958	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	3	154	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTGTGTTCAGACT	NA	False	NA	NA	False	CATAAA	-16	NA	108017031	107894987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.38	chr5	-	3803	19	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	10	153	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	51.3541624408382	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTGTGTTCAGAC	NA	False	NA	NA	False	CATAAA	-15	NA	108017024	107894988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.39	chr5	-	3791	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-91	151	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	51.0594334471568	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCCTTGTGTTCAG	NA	False	NA	NA	False	CATAAA	-13	NA	108017125	107894990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969683_107989936_107990167_108016656
ES.26590.4	chr5	-	6020	19	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	121	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	51.3541624408382	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016913	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.41	chr5	-	3371	18	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-3	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	63.9374694525831	364	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCTGAAAAGAATGTTG	NA	False	NA	61	True	AATAAA	-19	NA	108022913	107895073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896319_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108022854
ES.26590.42	chr5	-	3745	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-110	8	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGCTAATCTATTTAA	NA	False	NA	1	True	ATTAAA	-20	NA	108017144	107895133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.43	chr5	-	3632	19	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	34	6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	51.3541624408382	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTGCTAATCTATTT	NA	False	NA	-1	True	ATTAAA	-18	NA	108017000	107895135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.44	chr5	-	3812	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTCTTGCTAATCTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	108017035	107895137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.45	chr5	-	3431	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	121	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	51.0594334471568	363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACTTCTTGCTAATCTA	NA	False	NA	-4	True	ATTAAA	-15	NA	108016913	107895138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969683_107989936_107990167_108016656
ES.26590.46	chr5	-	4067	21	NNC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	78.0935336631657	363	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACTTCTTGCTAATCT	NA	False	NA	-5	True	ATTAAA	-14	NA	108017036	107895139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108013366_108013628_108015880_108016023_108016656
ES.26590.47	chr5	-	3157	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	121	-349	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTGTTTTAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	108016913	107895490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.48	chr5	-	3375	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	32	-400	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTTCTTTGTATAATT	NA	False	NA	NA	False	ACTAAA	-41	NA	108017002	107895541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.49	chr5	-	3061	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	21	-545	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACATTTGTGTTTATTA	NA	False	NA	NA	False	TTTAAA	-42	NA	108017013	107895686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.5	chr5	-	5743	17	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-134	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	52.6167971635484	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016899	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_108016656
ES.26590.50	chr5	-	3030	20	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	119	-658	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTGCTATGTCTAAA	NA	False	NA	NA	False	TATAAA	-15	NA	108016915	107895799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.51	chr5	-	199	1	Intergenic	novelGene_22121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTATATTATTA	NA	False	NA	NA	False	NA	NA	NA	107923215	107923016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107923000_107923200
ES.26590.52	chr5	-	5431	12	NIC	ENSMUSG00000011831.17	novel	2441	18	NA	NA	-68	7214	intron_retention	FALSE	canonical	3	73	junction_1	36.5271324491627	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTTGGGTTACAGT	NA	False	NA	NA	False	AATAAA	-23	NA	108016833	107954227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.53	chr5	-	4487	8	NIC	ENSMUSG00000011831.17	novel	1587	10	NA	NA	96	239	intron_retention	FALSE	canonical	3	169	junction_2	16.5960408359516	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108016938	107961202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.54	chr5	-	3800	9	NIC	ENSMUSG00000011831.17	novel	1587	10	NA	NA	30	239	intron_retention	FALSE	canonical	3	169	junction_2	15.7480157480236	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108017004	107961202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.55	chr5	-	178	1	Intergenic	novelGene_22123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCATCTT	8824	False	NA	NA	False	NA	NA	NA	107967397	107967219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_107967200_107967400
ES.26590.56	chr5	-	558	2	NIC	ENSMUSG00000011831.17	novel	358	3	NA	NA	53	-2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	0	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGACTTTGGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	108016981	107997937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107998171_108016656
ES.26590.6	chr5	-	6381	20	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108017127	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26590.7	chr5	-	9446	7	ISM	ENSMUSG00000011831.17	ENSMUST00000155897.8	2149	8	5513	-2481	-4723	0	3prime_fragment	FALSE	canonical	3	188	junction_5	8.29491142541954	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	107952135	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991
ES.26590.8	chr5	-	5833	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-120	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	65.9554741281878	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016885	107892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
ES.26591.1	chr5	-	156	1	Intergenic	novelGene_22131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	108043638	108043482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108043500_108043600
ES.26592.1	chr5	-	449	1	Intergenic	novelGene_22132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGCTCAGTT	NA	False	NA	NA	False	NA	NA	NA	108046903	108046454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108046500_108046900
ES.26593.1	chr5	-	1152	2	Antisense	novelGene_ENSMUSG00000058558.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGCTGTACTGTGA	NA	False	NA	NA	False	AAAAAG	-31	NA	108054589	108053181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108053290_108053545
ES.26593.2	chr5	-	1408	1	Antisense	novelGene_ENSMUSG00000058558.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGCTGTACTGTG	NA	False	NA	NA	False	AAAAAG	-30	NA	108054590	108053182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108053200_108054600
ES.26593.3	chr5	-	224	2	Antisense	novelGene_ENSMUSG00000058558.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-11	NA	108054589	108053217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108053340_108054487
ES.26594.1	chr5	-	2991	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	67	-337	15	337	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCAATTGTCATGCC	NA	False	NA	NA	False	NA	NA	NA	108134884	108055581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.11	chr5	-	1784	6	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	15	502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.9874064284071	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTAATGCT	NA	False	NA	NA	False	NA	NA	NA	108134936	108057066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108058083_108059477_108059655_108062211_108062320_108064376_108064603_108072450_108072586_108134814
ES.26594.12	chr5	-	1359	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	-26	1388	-26	262	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGGAAGAAAATTTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	108134977	108057306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.2	chr5	-	2731	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	-10	0	-10	0	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTGATCAATATGTTT	NA	False	NA	NA	False	NA	NA	NA	108134961	108055918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.3	chr5	-	2433	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	3	285	3	-285	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACCAGATCTGAAAATC	NA	False	NA	NA	False	AATAAA	-19	NA	108134948	108056203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.4	chr5	-	1948	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	-133	906	-133	744	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTGTGTACTTACACA	NA	False	NA	NA	False	ATTAAA	-22	NA	108135084	108056824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.5	chr5	-	2732	6	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	-4	739	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	75.4426934831995	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTTACTGTGTACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	108134955	108056829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108089748_108089876_108134023
ES.26594.6	chr5	-	1709	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	-6	1018	-6	632	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTAATGTTTTAGCA	NA	False	NA	NA	False	TTTAAA	-19	NA	108134957	108056936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ES.26594.7	chr5	-	4111	5	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	0	630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	74.6558771966414	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTACTAATGTTTTAG	NA	False	NA	NA	False	TTTAAA	-17	NA	108134899	108056938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108058083_108059477_108061254_108061348_108062320_108072450_108072586_108134814
ES.26594.8	chr5	-	1838	6	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	20	629	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	74.2293742395825	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTTACTAATGTTTTA	NA	False	NA	NA	False	TTTAAA	-16	NA	108134931	108056939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108108617_108108776_108134814
ES.26594.9	chr5	-	1537	5	NNC	ENSMUSG00000029270.11	novel	2721	5	NA	NA	3	525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.8543192321932	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTCATTCCATAAAC	NA	False	NA	NA	False	TTTAAA	-21	NA	108134896	108057043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072582_108134814
ES.26595.1	chr5	+	343	1	Intergenic	novelGene_22138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAATTAA	8981	False	NA	NA	False	NA	NA	NA	108141871	108142214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108141900_108142200
ES.26596.1	chr5	-	166	1	Intergenic	novelGene_22139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	108144865	108144699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108144700_108144900
ES.26597.1	chr5	+	4821	4	Genic_Genomic	ENSMUSG00000084855.3	novel	227	1	NA	NA	-1099	5953	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGGTGTAGGCT	NA	False	NA	NA	False	NA	NA	NA	108149026	108156305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_108149298_108149862_108150275_108151187_108151332_108152311
ES.26597.2	chr5	+	128	1	Intergenic	novelGene_22140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTGCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	108149078	108149206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108149100_108149200
ES.26598.1	chr5	+	172	1	Intergenic	novelGene_22141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAGAATTCA	9903	False	NA	NA	False	NA	NA	NA	108171016	108171188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108171000_108171200
ES.26599.1	chr5	+	178	1	Intergenic	novelGene_22142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATTCCAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	108189697	108189875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108189700_108189900
ES.266.1	chr1	+	4224	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-500	-5	-500	5	multi-exon	FALSE	canonical	3	381	junction_1	0	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGTCTGTGGTGACT	1263	False	NA	25	True	AATAAA	-20	NA	36106980	36145532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36108266_36142593
ES.266.10	chr1	+	3717	2	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGCTGTGGTCTG	1746	False	NA	17	True	AATAAA	-12	NA	36107463	36145524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108250_36142593
ES.266.11	chr1	+	3775	3	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0.5	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGCTGTGGTCTGTG	1747	False	NA	19	True	AATAAA	-14	NA	36107464	36145526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36132811_36132853_36142593
ES.266.12	chr1	+	3798	3	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	0	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	1756	False	NA	20	True	AATAAA	-15	NA	36107473	36145527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36136017_36136090_36142593
ES.266.13	chr1	+	3716	3	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	177	-3	intron_retention	FALSE	canonical	0	0	junction_1	1	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGCTGTGGTCTG	1940	False	NA	17	True	AATAAA	-12	NA	36107657	36145524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36112801_36112979_36142593
ES.266.14	chr1	+	7088	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCCTTGAGCCTCTACT	NA	False	NA	NA	False	NA	NA	NA	36117106	36124194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36117100_36124200
ES.266.15	chr1	+	5599	2	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-10708	-125	intron_retention	FALSE	canonical	1	1	junction_1	0	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGGAGGAATCCTTTGG	NA	False	NA	8	True	ATTAAA	-15	NA	36130062	36145402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36132853_36142593
ES.266.16	chr1	+	5603	2	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-10584	3	intron_retention	FALSE	canonical	1	1	junction_1	0	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGGTCTGTGGTGA	NA	False	NA	23	True	AATAAA	-18	NA	36130186	36145530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36132853_36142593
ES.266.17	chr1	+	5731	2	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-7040	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	1712	False	NA	20	True	AATAAA	-15	NA	36133730	36145527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36134261_36140326
ES.266.18	chr1	+	7448	1	FSM	ENSMUSG00000045216.8	ENSMUST00000194670.2	3291	1	-2691	-1466	-2691	0	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	6061	False	NA	20	True	AATAAA	-15	NA	36138079	36145527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36138100_36145500
ES.266.2	chr1	+	3668	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-69	120	-69	-120	multi-exon	FALSE	canonical	3	381	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAATCCTTTGGTTATT	1694	False	NA	13	True	ATTAAA	-20	NA	36107411	36145407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36108266_36142593
ES.266.3	chr1	+	2368	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-53	1404	-53	62	multi-exon	FALSE	canonical	3	381	junction_1	0	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACCACTCTGGGTGTC	1710	False	NA	75	True	NA	NA	NA	36107427	36144123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36108266_36142593
ES.266.4	chr1	+	2228	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-36	1527	-36	-61	multi-exon	FALSE	canonical	3	381	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAGCAACTCTTTCTAT	1727	False	NA	-48	True	NA	NA	NA	36107444	36144000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36108266_36142593
ES.266.5	chr1	+	1996	2	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-33	-10031	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCCTGTGCACTTCCA	1730	False	NA	NA	False	AATACA	-22	NA	36107447	36134030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36132852
ES.266.6	chr1	+	3598	3	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	190.5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTGCTGTGGTCTG	1744	False	NA	17	True	AATAAA	-12	NA	36107461	36145524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36142593_36144743_36144879
ES.266.7	chr1	+	1702	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	-17	2034	-17	-568	multi-exon	FALSE	canonical	3	381	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCGAGGGAAC	1746	False	NA	NA	False	NA	NA	NA	36107463	36143493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36108266_36142593
ES.266.9	chr1	+	3932	3	NNC	ENSMUSG00000045216.8	novel	3719	2	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_1	1	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGCTGTGGTCTGTG	1746	False	NA	19	True	AATAAA	-14	NA	36107463	36145526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36108266_36112781_36112979_36142593
ES.2660.1	chr10	+	2882	16	NNC	ENSMUSG00000091415.6	novel	6968	40	NA	NA	95259	-967	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.77768888746662	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTTGTTTTTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	41275234	41309563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41275344_41275667_41275888_41278227_41278294_41282823_41283031_41283345_41283565_41284348_41284460_41284940_41285155_41296483_41296686_41298368_41298516_41298877_41299099_41300589_41300787_41303223_41303394_41304306_41304406_41306748_41306852_41308436_41308552_41309081
ES.2660.2	chr10	+	2491	4	NNC	ENSMUSG00000091415.6	novel	6968	40	NA	NA	95260	-25610	intron_retention	FALSE	canonical	0	0	junction_1	4.54606056566195	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCAATCGTACTGCAG	NA	False	NA	NA	False	ATTAAA	-10	NA	41275235	41284920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41275344_41275667_41275888_41278227_41278294_41282823
ES.2660.3	chr10	+	2153	5	NNC	ENSMUSG00000091415.6	novel	6968	40	NA	NA	95260	-25627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.30116263352131	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATCTGACTTGTGA	NA	False	NA	NA	False	AAGAAA	-9	NA	41275235	41284903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41275338_41275667_41275888_41278227_41278294_41282823_41283031_41283345
ES.2660.4	chr10	+	2162	5	NNC	ENSMUSG00000091415.6	novel	6968	40	NA	NA	95260	-25624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.30116263352131	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGACTTGTGAATT	NA	False	NA	NA	False	AAGAAA	-12	NA	41275235	41284906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41275344_41275667_41275888_41278227_41278294_41282823_41283031_41283345
ES.2660.5	chr10	+	975	3	ISM	ENSMUSG00000091415.6	ENSMUST00000173494.4	6968	40	95705	27005	95705	-27005	intron_retention	FALSE	canonical	2	7	junction_2	2	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATGAGTTCATTTGG	NA	False	NA	NA	False	CATAAA	-19	NA	41275680	41283525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_41275888_41278227_41278294_41282823
ES.26600.1	chr5	-	236	1	Intergenic	novelGene_22143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGATAGATCACGCCAG	NA	False	NA	NA	False	NA	NA	NA	108190518	108190282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108190300_108190500
ES.26601.1	chr5	-	175	1	Intergenic	novelGene_22144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108195478	108195303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108195300_108195500
ES.26602.1	chr5	+	157	1	Intergenic	novelGene_22145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	108195639	108195796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108195600_108195800
ES.26603.1	chr5	+	198	1	Intergenic	novelGene_22146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTTTCCTCAACTTT	NA	False	NA	11	True	NA	NA	NA	108199104	108199302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108199100_108199300
ES.26604.1	chr5	-	180	1	Intergenic	novelGene_22147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTGTAAGAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	108199804	108199624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108199600_108199800
ES.26605.1	chr5	+	604	1	Intergenic	novelGene_22148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAATAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	108201666	108202270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108201700_108202300
ES.26605.2	chr5	+	814	1	Intergenic	novelGene_22149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATTAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	108201700	108202514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108201700_108202500
ES.26606.1	chr5	-	184	1	Intergenic	novelGene_22150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	108207580	108207396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108207400_108207600
ES.26607.1	chr5	+	3907	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-5104	5	intron_retention	FALSE	canonical	0	0	junction_1	710.757845039866	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTTCTTCTGTAT	NA	False	NA	38	True	ATTAAA	-39	NA	108208435	108256875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208513_108228690_108228890_108229002_108229085_108234864_108234961_108235172_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.10	chr5	+	4074	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	0	intron_retention	FALSE	canonical	0	0	junction_4	691.207703146376	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208600	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.100	chr5	+	4329	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	371	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATATACCTTCCTTC	NA	False	NA	NA	False	AATAGA	-9	NA	108208607	108257241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.101	chr5	+	4502	19	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_7	803.299307716481	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108220436_108220522_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.102	chr5	+	2421	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	79	intron_retention	FALSE	non_canonical	0	0	junction_1	687.889706921748	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108208607	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217004_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.103	chr5	+	3118	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-138	intron_retention	FALSE	canonical	0	0	junction_3	625.383865791113	1702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTATTTTACGTGTT	NA	False	NA	-35	True	TATAAA	-22	NA	108208607	108255997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241957_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.104	chr5	+	4486	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	380	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCCTTCCTTTTTCAT	NA	False	NA	NA	False	AATAGA	-18	NA	108208607	108257250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.105	chr5	+	4007	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_4	715.183096991408	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248773_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.107	chr5	+	6813	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	739.546205347408	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGTTAGAGTTGTCTT	NA	False	NA	5	True	AAAAAG	-12	NA	108208607	108256037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108220656_108221172_108221321_108228778_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.109	chr5	+	3857	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	613.853136726846	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.11	chr5	+	8824	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	4711	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTCTTGAGTTAGGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	108208600	108261581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.110	chr5	+	4242	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_5	782.998500856643	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.111	chr5	+	4758	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-95	intron_retention	FALSE	canonical	3	616	junction_3	370.853932233776	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108208607	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.112	chr5	+	3947	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	628.784902873497	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248843_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.113	chr5	+	2637	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	35	intron_retention	FALSE	non_canonical	0	0	junction_1	736.497368178145	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208607	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221148_108221321_108228690_108228896_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.114	chr5	+	6205	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	79	intron_retention	FALSE	canonical	0	0	junction_2	786.048934440878	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108208607	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217533_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.116	chr5	+	3985	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_3	622.460948697235	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.117	chr5	+	2652	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	879.5	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108252283_108252397_108254453
ES.26607.118	chr5	+	4526	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	792.300858587842	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGGCTTCACAGTT	NA	False	NA	49	True	NA	NA	NA	108208607	108257126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217533_108217564_108220436_108220656_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.119	chr5	+	4897	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-5	intron_retention	FALSE	canonical	0	0	junction_4	756.303660355195	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGCTAATGAGTTTT	NA	False	NA	28	True	ATTAAA	-29	NA	108208607	108256865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.120	chr5	+	4328	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_2	658.342793972107	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217031_108217230_108221148_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.121	chr5	+	4378	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	218	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108208607	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.123	chr5	+	3153	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-94	intron_retention	FALSE	canonical	0	0	junction_4	721.307065439582	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108208607	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.124	chr5	+	4380	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	753.77367292842	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217031_108217390_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.125	chr5	+	3457	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCACCTCCACCAA	NA	False	NA	NA	False	NA	NA	NA	108208607	108256454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.127	chr5	+	3931	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	intron_retention	FALSE	canonical	0	0	junction_3	752.362537447939	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108252131_108252185_108252291_108252397_108254453
ES.26607.128	chr5	+	4073	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	2	intron_retention	FALSE	canonical	0	0	junction_4	698.106378394837	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208607	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.129	chr5	+	3236	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-96	intron_retention	FALSE	canonical	0	0	junction_4	691.207703146376	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTAGAGTTGTCTTCT	NA	False	NA	7	True	AAAAAG	-14	NA	108208607	108256039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.130	chr5	+	2817	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	44053	intron_retention	TRUE	non_canonical	0	0	junction_4	744.790813854054	1872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGCTTGAAGAGTTGAA	NA	False	NA	NA	False	AATAAA	-35	NA	108208607	108300923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453_108255493_108259882_108259924_108300875
ES.26607.131	chr5	+	4011	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	672.148118596886	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208607	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.132	chr5	+	8771	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	4704	intron_retention	FALSE	canonical	0	0	junction_3	746.610491934494	1724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAACAATTCTTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	108208607	108261574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.134	chr5	+	4140	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	3	intron_retention	FALSE	canonical	0	0	junction_4	709.4943927427	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGAGTTTTTCTTCTGT	NA	False	NA	36	True	ATTAAA	-37	NA	108208607	108256873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.136	chr5	+	3488	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	727.824401469888	1706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTAGCTCTTCATTT	NA	False	NA	103	True	AGTAAA	-13	NA	108208607	108256135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.137	chr5	+	3354	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-95	intron_retention	FALSE	canonical	0	0	junction_4	742.994321983688	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108208607	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.139	chr5	+	3228	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-102	intron_retention	FALSE	canonical	0	0	junction_3	504.016389326834	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACCAGTGTTAGAGTTG	NA	False	NA	1	True	AAAAAG	-8	NA	108208607	108256033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252397_108254453
ES.26607.142	chr5	+	4328	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	208	intron_retention	FALSE	non_canonical	0	0	junction_3	801.304933804089	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGAAAGACAGTGTTT	NA	False	NA	1	True	AAAAAG	-14	NA	108208607	108257078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228891_108229002_108229089_108234864_108234961_108235082_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.144	chr5	+	3875	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	613.829159201801	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.145	chr5	+	4030	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-6	intron_retention	FALSE	canonical	0	0	junction_4	757.032161719402	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGCTAATGAGTTT	NA	False	NA	27	True	ATTAAA	-28	NA	108208607	108256864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.146	chr5	+	2064	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	74	intron_retention	FALSE	canonical	0	0	junction_3	632.644950296843	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATGCATGGTGTTAGA	NA	False	NA	-4	True	ATTAAA	-10	NA	108208607	108255103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.147	chr5	+	5430	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1472	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGCTAGTATTTCTTA	NA	False	NA	NA	False	TTTAAA	-23	NA	108208607	108258342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.15	chr5	+	3315	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	84	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACGTGTATTGATGA	NA	False	NA	NA	False	ACTAAA	-32	NA	108208600	108256220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.152	chr5	+	4063	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_3	746.610491934494	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.154	chr5	+	3733	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	727.786894161752	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.156	chr5	+	4488	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	778.362045611451	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217390_108221172_108221321_108226731_108226841_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.157	chr5	+	3697	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-95	intron_retention	FALSE	canonical	0	0	junction_6	747.151383798102	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108208607	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108220436_108220656_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.159	chr5	+	4804	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-20	intron_retention	FALSE	canonical	0	0	junction_4	642.84206728355	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTATTTTTAAAA	NA	False	NA	13	True	ATTAAA	-14	NA	108208607	108256850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.16	chr5	+	4401	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	-4	intron_retention	FALSE	canonical	0	0	junction_2	780.865465365193	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208600	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217390_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.160	chr5	+	4791	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-4932	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	785.453854650588	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTATTTTTAAAA	NA	False	NA	13	True	ATTAAA	-14	NA	108208607	108256850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108213245_108213832_108217027_108217230_108221170_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.161	chr5	+	2482	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	805.822726576179	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208607	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228777_108228890_108229002_108229089_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.162	chr5	+	7137	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	3179	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTCTTCAACATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	108208607	108260049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.163	chr5	+	3022	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-95	intron_retention	FALSE	canonical	0	0	junction_3	628.358837291533	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108208607	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108252131_108252185_108252291_108252397_108254453
ES.26607.165	chr5	+	3877	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-81	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGTTCAGTTTGTAT	NA	False	NA	-48	True	NA	NA	NA	108208607	108256789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.166	chr5	+	4079	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-13	intron_retention	FALSE	canonical	0	0	junction_3	609.08056026185	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTTTTAAAAGAGCTAA	NA	False	NA	20	True	ATTAAA	-21	NA	108208607	108256857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108233475_108233613_108234867_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.167	chr5	+	3224	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-101	intron_retention	FALSE	canonical	0	0	junction_4	796.308187129135	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCAGTGTTAGAGTTGT	NA	False	NA	2	True	AAAAAG	-9	NA	108208607	108256034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.169	chr5	+	3936	20	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	non_canonical	0	0	junction_4	812.040629143334	1706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGCTCTTCATTTT	NA	False	NA	104	True	AGTAAA	-14	NA	108208607	108256136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108217230_108217533_108217628_108220500_108220656_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.17	chr5	+	3885	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTTCTTCTGTAT	NA	False	NA	38	True	ATTAAA	-39	NA	108208600	108256875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.170	chr5	+	4984	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	785.142650891238	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108248850_108251894_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.171	chr5	+	4158	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-100	intron_retention	FALSE	canonical	0	0	junction_3	722.08985000434	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGTGTTAGAGTTGTC	NA	False	NA	3	True	AAAAAG	-10	NA	108208607	108256035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.172	chr5	+	5532	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	2	intron_retention	FALSE	canonical	0	0	junction_1	738.07873892429	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208607	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.173	chr5	+	7964	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	222	intron_retention	FALSE	non_canonical	0	0	junction_5	834.087450710371	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATGTCCTTTCCTCT	NA	False	NA	15	True	AAAAAG	-28	NA	108208607	108257092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108220522_108221172_108221321_108228690_108228888_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.175	chr5	+	4227	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	727.824401469888	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGTTTTTCTTCTGTA	NA	False	NA	37	True	ATTAAA	-38	NA	108208607	108256874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.176	chr5	+	5941	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1874	intron_retention	FALSE	canonical	0	0	junction_4	691.207703146376	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTCTTCAAAGTAAT	NA	False	NA	NA	False	AATACA	-20	NA	108208607	108258744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.177	chr5	+	3827	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	818.728057814719	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.178	chr5	+	1667	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	20	intron_retention	FALSE	canonical	0	0	junction_5	723.168725759874	1627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGTCGTCCTCCTGG	NA	False	NA	NA	False	AAAAAG	-12	NA	108208607	108251925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885
ES.26607.179	chr5	+	4303	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-17	intron_retention	FALSE	canonical	0	0	junction_2	681.721859216303	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTATTTTTAAAAGAG	NA	False	NA	16	True	ATTAAA	-17	NA	108208607	108256853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217390_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.180	chr5	+	6667	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	35	intron_retention	FALSE	canonical	0	0	junction_2	681.721859216303	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108208607	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.181	chr5	+	4121	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-17	intron_retention	FALSE	canonical	0	0	junction_2	768.53831580289	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTATTTTTAAAAGAG	NA	False	NA	16	True	ATTAAA	-17	NA	108208607	108256853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108242001_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.182	chr5	+	3783	17	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4932	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	806.103126156945	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTTGTCTTCTGTTTTT	NA	False	NA	13	True	AAAAAG	-20	NA	108208607	108256045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108213245_108213832_108221172_108221321_108228775_108228891_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.183	chr5	+	5149	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	intron_retention	FALSE	canonical	0	0	junction_3	709.213695811446	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.184	chr5	+	3952	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	711.695134369847	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235082_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.185	chr5	+	4473	19	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	807.841515137868	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108217533_108217628_108220500_108220656_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.186	chr5	+	3143	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-91	intron_retention	FALSE	non_canonical	0	0	junction_1	616.072190475719	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTTGTCTTCTGTTTT	NA	False	NA	12	True	AAAAAG	-19	NA	108208607	108256044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228679_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.187	chr5	+	3156	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	697.457465051135	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTTGTCTTCTGTTTT	NA	False	NA	12	True	AAAAAG	-19	NA	108208607	108256044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108226731_108226841_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.189	chr5	+	3161	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-94	intron_retention	FALSE	non_canonical	0	0	junction_2	718.882015382786	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108208607	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228891_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.19	chr5	+	3041	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4939	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	613.853136726846	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGAGTTGTCTTCTGTTT	NA	False	NA	11	True	AAAAAG	-18	NA	108208600	108256043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.190	chr5	+	4685	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-4932	1	intron_retention	FALSE	canonical	0	0	junction_5	799.593996096613	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108213245_108213832_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.191	chr5	+	3872	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	non_canonical	0	0	junction_5	771.473873644638	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453_108254627_108254969
ES.26607.192	chr5	+	3269	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-102	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACCAGTGTTAGAGTTG	NA	False	NA	1	True	AAAAAG	-8	NA	108208607	108256033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.193	chr5	+	5833	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1871	intron_retention	FALSE	canonical	3	616	junction_3	357.553592386612	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCTTTTCTTCAAAGT	NA	False	NA	NA	False	AATACA	-17	NA	108208607	108258741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.194	chr5	+	4273	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_5	743.5429438674	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.195	chr5	+	4156	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	intron_retention	FALSE	canonical	0	0	junction_1	784.266961350959	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215265_108215439_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.197	chr5	+	3492	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-94	intron_retention	FALSE	canonical	0	0	junction_1	716.662403088093	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108208607	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108220804_108221020_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.198	chr5	+	4269	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_5	735.115764692881	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.2	chr5	+	4267	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-5091	2	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208448	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.20	chr5	+	2450	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4936	34	intron_retention	FALSE	non_canonical	0	0	junction_3	622.475226947439	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTAGACTTCATT	NA	False	NA	8	True	AATATA	-17	NA	108208603	108255370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234875_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241995_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.201	chr5	+	4091	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108208607	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.202	chr5	+	4554	19	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	intron_retention	FALSE	non_canonical	0	0	junction_3	790.727833184617	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217031_108217230_108217533_108217628_108220500_108220656_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.203	chr5	+	3991	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	625.383865791113	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241957_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.204	chr5	+	4639	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	218	intron_retention	FALSE	canonical	0	0	junction_6	748.389639093911	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108208607	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.205	chr5	+	4053	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_4	720.218677817752	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252291_108252397_108254453
ES.26607.207	chr5	+	3643	13	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	807.468816047337	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108252131_108252185_108252291_108252397_108254453
ES.26607.21	chr5	+	2343	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4936	74	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATGCATGGTGTTAGA	NA	False	NA	-4	True	ATTAAA	-10	NA	108208603	108255103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.211	chr5	+	4204	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4931	1	intron_retention	FALSE	canonical	0	0	junction_5	777.887845386467	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208608	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235172_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.212	chr5	+	3976	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4930	-4	intron_retention	FALSE	canonical	0	0	junction_4	721.307065439582	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208609	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.214	chr5	+	1467	13	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4930	20	intron_retention	FALSE	canonical	3	182	junction_1	583.755704230993	1627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGTCGTCCTCCTGG	NA	False	NA	NA	False	AAAAAG	-12	NA	108208609	108251925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885
ES.26607.215	chr5	+	3858	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4930	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	792.733186718863	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208609	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228889_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.217	chr5	+	3935	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4930	2	intron_retention	FALSE	canonical	0	0	junction_2	629.055661694738	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208609	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228894_108229020_108229089_108234877_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.218	chr5	+	2642	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4930	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	879.5	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTATTTTTAAAAGAG	NA	False	NA	16	True	ATTAAA	-17	NA	108208609	108256853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108252274_108252397_108254453
ES.26607.219	chr5	+	8438	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4930	2	intron_retention	FALSE	canonical	0	0	junction_5	803.724509085788	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208609	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.22	chr5	+	3384	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4936	-100	intron_retention	FALSE	canonical	0	0	junction_5	729.324192210673	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGTGTTAGAGTTGTC	NA	False	NA	3	True	AAAAAG	-10	NA	108208603	108256035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.220	chr5	+	2369	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTGACTAGACTTCAT	NA	False	NA	7	True	AATATA	-16	NA	108208610	108255369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.224	chr5	+	5113	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-1	intron_retention	FALSE	canonical	0	0	junction_3	617.559436947785	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108208610	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.228	chr5	+	3761	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	741.243485857005	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208610	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246969_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.229	chr5	+	3974	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	0	intron_retention	FALSE	non_canonical	0	0	junction_3	611.689534596346	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208610	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235787_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.23	chr5	+	4318	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4936	6	intron_retention	FALSE	canonical	0	0	junction_5	687.180104553202	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTTTTCTTCTGTATC	NA	False	NA	39	True	ATTAAA	-40	NA	108208603	108256876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.231	chr5	+	1862	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	24	True	NA	NA	NA	108208610	108254862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.233	chr5	+	5074	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	1119	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCCTCTGTATGGAGAA	NA	False	NA	NA	False	ATTAAA	-22	NA	108208610	108257989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.234	chr5	+	4423	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	1	intron_retention	FALSE	canonical	2	7	junction_2	700.48360457388	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208610	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.235	chr5	+	1968	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	17	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTGGGTTTTATTAT	NA	False	NA	45	True	NA	NA	NA	108208610	108254883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.236	chr5	+	3180	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	672.148118596886	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTTGTCTTCTGTTTT	NA	False	NA	12	True	AAAAAG	-19	NA	108208610	108256044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.237	chr5	+	4104	16	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-4929	0	intron_retention	FALSE	canonical	0	0	junction_4	683.664583127005	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208610	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108213682_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.238	chr5	+	4325	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	768.348257616752	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208610	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108226731_108226841_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.239	chr5	+	4190	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-20	intron_retention	FALSE	canonical	0	0	junction_1	687.889706921748	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTATTTTTAAAA	NA	False	NA	13	True	ATTAAA	-14	NA	108208610	108256850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108216974_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.240	chr5	+	4435	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	779.920096164591	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208610	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108220436_108220656_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.241	chr5	+	4338	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	0	intron_retention	FALSE	canonical	0	0	junction_2	792.883188663407	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208610	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108218437_108218476_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.243	chr5	+	3887	13	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	213	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	496.57702630665	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACAGTGTTTATGTC	NA	False	NA	6	True	AAAAAG	-19	NA	108208610	108257083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.244	chr5	+	8267	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4929	32	intron_retention	FALSE	canonical	0	0	junction_4	774.661180050705	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTGACTAGACTTCA	NA	False	NA	6	True	AATATA	-15	NA	108208610	108255368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.246	chr5	+	3712	16	NNC	ENSMUSG00000029267.18	novel	3330	15	NA	NA	-4928	-97	intron_retention	FALSE	canonical	1	7	junction_1	613.232875831034	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTAGAGTTGTCTTC	NA	False	NA	6	True	AAAAAG	-13	NA	108208611	108256038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108213245_108213832_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.247	chr5	+	4536	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4928	1872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	879.5	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTTTCTTCAAAGTA	NA	False	NA	NA	False	AATACA	-18	NA	108208611	108258742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208754_108252291_108252397_108254453
ES.26607.25	chr5	+	2473	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4935	46	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTGTCGTCTTAATA	NA	False	NA	20	True	AATATA	-29	NA	108208604	108255382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.251	chr5	+	3868	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4852	1	intron_retention	FALSE	canonical	0	0	junction_3	618.094723108597	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208687	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235172_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.252	chr5	+	4178	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-114	-4	-46	4	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGTTTTTCTTCTGTA	NA	False	NA	37	True	ATTAAA	-38	NA	108213493	108256874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.253	chr5	+	4357	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-26	1	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213513	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.254	chr5	+	4535	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_3	753.244754976531	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213514	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108217533_108217564_108221170_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.255	chr5	+	3840	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-24	72	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAAAAATATGTGAC	NA	False	NA	NA	False	ACTAAA	-20	NA	108213515	108256208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.256	chr5	+	4560	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	746.056371445885	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108213531	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217390_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.258	chr5	+	4480	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213539	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.260	chr5	+	4131	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	0	-145	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGTCTCTAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	108213539	108256725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.262	chr5	+	2505	16	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	4	79	intron_retention	FALSE	canonical	0	0	junction_4	724.352842197779	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108213543	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.263	chr5	+	5901	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	4	1869	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	723.886505931274	1722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTCCTTTTCTTCAAA	NA	False	NA	NA	False	AATACA	-15	NA	108213543	108258739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228778_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235952_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.264	chr5	+	5798	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	4	1472	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGCTAGTATTTCTTA	NA	False	NA	NA	False	TTTAAA	-23	NA	108213543	108258342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.265	chr5	+	4671	19	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	4	2	intron_retention	FALSE	non_canonical	0	0	junction_6	841.690824735808	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213543	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108220436_108220522_108221172_108221321_108226731_108226841_108228690_108228891_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.266	chr5	+	4485	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_3	734.256317537514	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213543	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221325_108228684_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.267	chr5	+	4274	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213543	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.268	chr5	+	4232	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_4	699.021856278869	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213544	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108215325_108215439_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.269	chr5	+	2361	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-63	1762	5	79	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108213544	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.27	chr5	+	4223	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	263	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTCACAGTTGTTTCTT	NA	False	NA	56	True	NA	NA	NA	108208605	108257133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.270	chr5	+	4302	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	723.439531374638	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213544	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.272	chr5	+	2973	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	5	34	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTAGACTTCATT	NA	False	NA	8	True	AATATA	-17	NA	108213544	108255370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.273	chr5	+	3443	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	5	-93	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGAGTTGTCTTCTGTT	NA	False	NA	10	True	AAAAAG	-17	NA	108213544	108256042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.275	chr5	+	2625	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	16	46	intron_retention	FALSE	non_canonical	0	0	junction_2	705.472066587114	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTGTCGTCTTAATA	NA	False	NA	20	True	AATATA	-29	NA	108213555	108255382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228690_108228891_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.276	chr5	+	4463	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-15	209	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAAGACAGTGTTTA	NA	False	NA	2	True	AAAAAG	-15	NA	108213561	108257079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.277	chr5	+	4171	15	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_4	763.816227630597	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213570	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.278	chr5	+	4207	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_4	692.923006785987	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213570	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.279	chr5	+	6805	16	NNC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	-1	35	intron_retention	FALSE	canonical	0	0	junction_2	620.880521696584	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108213575	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108221321_108228775_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.280	chr5	+	4709	17	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-2	371	intron_retention	FALSE	canonical	0	0	junction_3	798.359528971753	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATATACCTTCCTTC	NA	False	NA	NA	False	AATAGA	-9	NA	108213579	108257241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108226731_108226841_108228692_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241995_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.281	chr5	+	4462	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	781.719557851809	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213579	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108215325_108215439_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.284	chr5	+	4417	15	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-2	-95	intron_retention	FALSE	canonical	0	0	junction_3	695.423509196272	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108213579	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.285	chr5	+	3461	16	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-2	-94	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213579	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.288	chr5	+	4482	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	746.705723494872	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213580	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217360_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.289	chr5	+	4397	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_5	744.301830471852	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213581	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108215325_108215439_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.29	chr5	+	1834	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4934	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	879.5	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCAGTGTTAGAGTTGT	NA	False	NA	2	True	AAAAAG	-9	NA	108208605	108256034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208754_108252291_108252397_108254453
ES.26607.290	chr5	+	4150	16	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	692.690740678856	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213581	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.291	chr5	+	4448	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	716.662403088093	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108213581	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108220804_108221020_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.292	chr5	+	4160	16	NIC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_3	740.882254852656	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213581	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.294	chr5	+	4553	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	775.57348800363	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108213581	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221321_108223691_108223810_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.296	chr5	+	4506	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_6	752.566547425873	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213581	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108220587_108220656_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.297	chr5	+	3280	15	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	0	-94	intron_retention	FALSE	canonical	0	0	junction_4	735.784948062896	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213582	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.298	chr5	+	4542	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	769.31222147945	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108213582	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229084_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.299	chr5	+	4222	17	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	820.838176804661	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213583	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235160_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.3	chr5	+	4060	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4981	1	intron_retention	FALSE	canonical	0	0	junction_4	810.743979947066	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208558	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108247519_108247598_108248678_108248850_108252131_108252185_108252291_108252397_108254453
ES.26607.302	chr5	+	4647	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	213	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACAGTGTTTATGTC	NA	False	NA	6	True	AAAAAG	-19	NA	108213583	108257083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.303	chr5	+	4186	18	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	787.426446282126	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108213583	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453_108254958_108255080
ES.26607.304	chr5	+	3938	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_1	616.072190475719	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213583	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213690_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.305	chr5	+	3691	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	804.557769306996	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTAGCTCTTCATT	NA	False	NA	102	True	AGTAAA	-12	NA	108213583	108256134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.306	chr5	+	2729	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	31	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCTGTGACTAGACTTC	NA	False	NA	5	True	AATATA	-14	NA	108213583	108255367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.307	chr5	+	3989	15	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	616.072190475719	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213583	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.308	chr5	+	3973	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	1	-144	intron_retention	FALSE	canonical	0	0	junction_3	701.408557322845	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTCTCTAGACTTAAT	NA	False	NA	NA	False	NA	NA	NA	108213583	108256726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241957_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.309	chr5	+	4304	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-24	-220	1	220	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTATGTCCTTTCCT	NA	False	NA	13	True	AAAAAG	-26	NA	108213583	108257090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.31	chr5	+	2932	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	47	intron_retention	FALSE	canonical	0	0	junction_6	763.891412417628	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTCGTCTTAATAT	NA	False	NA	21	True	AATATA	-30	NA	108208605	108255383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.310	chr5	+	3520	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	734.256317537514	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213583	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.311	chr5	+	4461	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_5	797.247018554319	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213583	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251890_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.314	chr5	+	3290	15	NIC	ENSMUSG00000029267.18	novel	3330	15	NA	NA	1	-94	intron_retention	FALSE	canonical	3	18	junction_13	627.46230474631	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213583	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.315	chr5	+	5239	15	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_3	695.423509196272	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108213583	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.316	chr5	+	4088	14	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	1	215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	783.472108232768	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAGTGTTTATGTCCT	NA	False	NA	8	True	AAAAAG	-21	NA	108213583	108257085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235808_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.317	chr5	+	4311	17	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	754.820236774128	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108213583	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.318	chr5	+	2299	16	NIC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	1	17	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTGGGTTTTATTAT	NA	False	NA	45	True	NA	NA	NA	108213583	108254883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.319	chr5	+	3194	19	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	45	intron_retention	FALSE	non_canonical	0	0	junction_3	784.826441456885	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTGTCGTCTTAAT	NA	False	NA	19	True	AATATA	-28	NA	108213583	108255381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217230_108217533_108217628_108220500_108220656_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.32	chr5	+	3607	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4934	-98	intron_retention	FALSE	canonical	0	0	junction_5	700.78250905684	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGTTAGAGTTGTCTT	NA	False	NA	5	True	AAAAAG	-12	NA	108208605	108256037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217360_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.320	chr5	+	3605	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	-94	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213583	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.322	chr5	+	4566	18	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	791.759981630867	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213583	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217031_108217230_108220436_108220656_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.323	chr5	+	4318	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	1	218	intron_retention	FALSE	non_canonical	0	0	junction_3	763.718604685559	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108213583	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235802_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251873_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.324	chr5	+	4339	17	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	5	2	intron_retention	FALSE	canonical	0	0	junction_5	742.101902958751	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108213587	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.327	chr5	+	3356	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-3	-94	intron_retention	FALSE	canonical	0	0	junction_4	692.923006785987	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGAGTTGTCTTCTGT	NA	False	NA	9	True	AAAAAG	-16	NA	108213591	108256041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.328	chr5	+	2068	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	-16	2008	-3	-4	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	24	True	NA	NA	NA	108213591	108254862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.329	chr5	+	2172	14	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	-3	-18	intron_retention	FALSE	canonical	0	0	junction_3	779.062803675677	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATCTTTTAAAAATCAG	NA	False	NA	-96	True	CATAAA	-4	NA	108213591	108255011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235082_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.330	chr5	+	4736	17	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	2	-97	intron_retention	FALSE	canonical	0	0	junction_4	817.498509172953	1704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTAGAGTTGTCTTC	NA	False	NA	6	True	AAAAAG	-13	NA	108213596	108256038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108238975_108239166_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.331	chr5	+	2744	16	NIC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	-4	27	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCTCTGTGACTAGA	NA	False	NA	1	True	AATATA	-10	NA	108213618	108255363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.332	chr5	+	4775	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-2	378	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCTTCCTTCCTTTTTC	NA	False	NA	NA	False	AATAGA	-16	NA	108213620	108257248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.333	chr5	+	4054	17	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	6	-93	intron_retention	FALSE	non_canonical	0	0	junction_2	707.679305900632	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGAGTTGTCTTCTGTT	NA	False	NA	10	True	AAAAAG	-17	NA	108213628	108256042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108213832_108217027_108217627_108221076_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.335	chr5	+	6576	15	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	3463	35	intron_retention	FALSE	canonical	0	0	junction_2	672.394931478183	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108217085	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108221321_108228690_108228894_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.336	chr5	+	4712	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-3358	2	intron_retention	FALSE	canonical	0	0	junction_1	747.959972922181	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108217422	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108218040_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.337	chr5	+	7671	15	NNC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	-3357	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	715.357114328507	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGCTAATGAGTTTT	NA	False	NA	28	True	ATTAAA	-29	NA	108217423	108256865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108221321_108228778_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.338	chr5	+	6626	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-2499	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	699.808684967224	1716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTATTTTTAAAA	NA	False	NA	13	True	ATTAAA	-14	NA	108218281	108256850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108221020_108221172_108221339_108228784_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.339	chr5	+	6837	15	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-2465	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	672.394931478183	1716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTAATGAGTTTTTCT	NA	False	NA	31	True	ATTAAA	-32	NA	108218315	108256868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108221321_108228690_108228888_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.340	chr5	+	6197	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-1713	-1	intron_retention	FALSE	canonical	0	0	junction_4	690.94478312911	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108219067	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.341	chr5	+	4414	15	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-1541	28	intron_retention	FALSE	non_canonical	0	0	junction_1	616.072190475719	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTCTGTGACTAGAC	NA	False	NA	2	True	AATATA	-11	NA	108219239	108255364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108221321_108228687_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.342	chr5	+	4348	15	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-61	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108220719	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.343	chr5	+	7131	14	ISM	ENSMUSG00000029267.18	ENSMUST00000141592.8	3068	16	10979	-545	-1470	-100	3prime_fragment	FALSE	canonical	0	0	junction_2	477.864294568729	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGTGTTAGAGTTGTC	NA	False	NA	3	True	AAAAAG	-10	NA	108224560	108256035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.344	chr5	+	5428	15	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	-786	-4	intron_retention	FALSE	canonical	0	0	junction_3	607.930149216611	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108225244	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.345	chr5	+	4886	15	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	-786	0	intron_retention	FALSE	canonical	0	0	junction_3	615.388316928624	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108225244	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108226295_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.346	chr5	+	5436	15	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	-760	-1	intron_retention	FALSE	canonical	0	0	junction_3	708.948837421737	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108225270	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.347	chr5	+	4964	16	FSM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	-759	-1530	-759	-4	multi-exon	FALSE	canonical	0	0	junction_1	693.585646397681	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108225271	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108226295_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.349	chr5	+	4033	16	FSM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	-703	-655	-703	-144	multi-exon	FALSE	canonical	0	0	junction_1	693.585646397681	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATATCTTTATTTTA	NA	False	NA	-41	True	TATAAA	-16	NA	108225327	108255991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108226295_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.350	chr5	+	935	8	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-622	-680	intron_retention	FALSE	canonical	0	0	junction_1	804.773412146524	1558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGTTTTTAGTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	108225408	108241355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108225469_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203
ES.26607.351	chr5	+	3461	15	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	-186	-90	intron_retention	FALSE	canonical	0	0	junction_3	615.388316928624	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTTGTCTTCTGTTTTT	NA	False	NA	13	True	AAAAAG	-20	NA	108225844	108256045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108226295_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.352	chr5	+	4240	14	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	2258	-1536	2258	2	3prime_fragment	FALSE	canonical	0	0	junction_2	477.864294568729	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108228288	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.353	chr5	+	3475	14	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	2762	-1275	2762	-259	3prime_fragment	FALSE	canonical	0	0	junction_2	477.864294568729	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCACTCCAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	108228792	108256611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.354	chr5	+	3334	10	ISM	ENSMUSG00000029267.18	ENSMUST00000134026.8	1932	14	21551	-2000	297	-4	3prime_fragment	FALSE	canonical	3	86	junction_4	538.133078221868	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108235158	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.356	chr5	+	162	1	Intergenic	novelGene_22152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1544	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	108239272	108239434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108239300_108239400
ES.26607.357	chr5	+	3485	9	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	940	1	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	706.507254032115	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108240910	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.358	chr5	+	7273	6	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	16603	-1536	2663	2	3prime_fragment	FALSE	canonical	3	1607	junction_2	92.0186937529543	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108242633	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.359	chr5	+	6545	7	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	3469	2	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	779.249300431012	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108243439	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.36	chr5	+	4168	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	7	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTTCTTCTGTATCT	NA	False	NA	40	True	ATTAAA	-41	NA	108208606	108256877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.360	chr5	+	2717	6	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	19669	-46	5729	46	3prime_fragment	FALSE	canonical	3	1607	junction_2	92.0186937529543	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTGTCGTCTTAATA	NA	False	NA	20	True	AATATA	-29	NA	108245699	108255382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.361	chr5	+	3500	5	NIC	ENSMUSG00000029267.18	novel	3330	15	NA	NA	6571	45	intron_retention	FALSE	canonical	3	1607	junction_1	90.5383206161899	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTGTCGTCTTAAT	NA	False	NA	19	True	AATATA	-28	NA	108246541	108255381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.362	chr5	+	2092	6	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	20952	-704	7012	-95	3prime_fragment	FALSE	canonical	3	1607	junction_2	92.0186937529543	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGAGTTGTCTTCTG	NA	False	NA	8	True	AAAAAG	-15	NA	108246982	108256040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.363	chr5	+	3140	6	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	20952	-1752	7012	218	3prime_fragment	FALSE	canonical	3	1607	junction_2	92.0186937529543	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108246982	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.364	chr5	+	5348	4	ISM	ENSMUSG00000029267.18	ENSMUST00000112626.8	1968	14	34110	-420	7749	35	3prime_fragment	FALSE	canonical	3	1730	junction_2	56.1802654160891	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGACTAGACTTCATTG	NA	False	NA	9	True	AATATA	-18	NA	108247719	108255371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.365	chr5	+	6901	4	ISM	ENSMUSG00000029267.18	ENSMUST00000198662.5	2675	16	23507	-3406	9567	1872	3prime_fragment	FALSE	canonical	3	1730	junction_2	56.1802654160891	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTTTCTTCAAAGTA	NA	False	NA	NA	False	AATACA	-18	NA	108249537	108258742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.366	chr5	+	3787	3	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	10117	-97	intron_retention	FALSE	canonical	3	1730	junction_1	14.5	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTAGAGTTGTCTTC	NA	False	NA	6	True	AAAAAG	-13	NA	108250087	108256038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108252185_108252291_108252397_108254453
ES.26607.367	chr5	+	4007	3	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	10725	-4	intron_retention	FALSE	canonical	3	1730	junction_1	14.5	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108250695	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108252185_108252291_108252397_108254453
ES.26607.368	chr5	+	2414	1	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	14482	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1700	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108254452	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108254500_108256900
ES.26607.369	chr5	+	4928	1	Genic_Genomic	ENSMUSG00000029267.18	novel	NA	NA	NA	NA	15007	3035	mono-exon	FALSE	NA	NA	NA	NA	NA	1699	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACATTTAAAAGAAGGT	NA	False	NA	NA	False	NA	NA	NA	108254977	108259905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_108255000_108259900
ES.26607.37	chr5	+	3818	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	79	intron_retention	FALSE	canonical	0	0	junction_3	642.330897784406	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108208606	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108248850_108251890_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.370	chr5	+	4038	1	Intergenic	novelGene_22154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATGACTCATTGGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	108256980	108261018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108257000_108261000
ES.26607.371	chr5	+	4748	1	Intergenic	novelGene_22155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTTATTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	108257229	108261977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108257200_108262000
ES.26607.372	chr5	+	186	1	Antisense	novelGene_ENSMUSG00000063406.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGAGAGAGGCCG	NA	False	NA	NA	False	NA	NA	NA	108266054	108266240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108266100_108266200
ES.26607.373	chr5	+	175	1	Antisense	novelGene_ENSMUSG00000063406.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTGTGG	NA	False	NA	NA	False	NA	NA	NA	108266897	108267072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108266900_108267100
ES.26607.374	chr5	+	177	1	Intergenic	novelGene_22156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTGAGGAA	6930	False	NA	NA	False	NA	NA	NA	108276600	108276777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108276600_108276800
ES.26607.375	chr5	+	4731	29	NNC	ENSMUSG00000056531.12	novel	494	4	NA	NA	-722	-682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6037377176739	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTACTGTTTTCTTCG	382	False	NA	NA	False	AGTAAA	-30	NA	108280018	108380812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280181_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.376	chr5	+	4756	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-128	708	-89	-708	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAATTTATTGATTAT	1015	False	NA	NA	False	AGTAAA	-4	NA	108280651	108380786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.377	chr5	+	4752	28	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-70	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.2468998780462	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	1034	False	NA	NA	False	AGTAAA	-3	NA	108280670	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339607_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.378	chr5	+	4758	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-68	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.0089263580989	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	1036	False	NA	NA	False	AGTAAA	-3	NA	108280672	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319454_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.379	chr5	+	5005	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-66	-750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.2756991869217	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACACTTCTAAAATA	1038	False	NA	NA	False	AATAAA	-21	NA	108280674	108380744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108281206_108283287_108283431_108283838_108283960_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319454_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.380	chr5	+	618	3	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-105	97371	-66	-3318	5prime_fragment	FALSE	canonical	2	80	junction_2	6.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATATGTGGATGAGTG	1038	False	NA	NA	False	AATATA	-12	NA	108280674	108284123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838
ES.26607.381	chr5	+	4720	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-66	-743	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.4589898485168	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTCTAAAATATAACTAT	1038	False	NA	NA	False	AATAAA	-28	NA	108280674	108380751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283265_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.382	chr5	+	5717	24	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-65	-762	intron_retention	FALSE	canonical	1	1	junction_1	26.5471724096741	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATATTTTAAAGAAAC	1039	False	NA	NA	False	AATAAA	-9	NA	108280675	108380732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319482_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.383	chr5	+	4823	30	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-63	-714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.0938437360836	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAGTCAATTTATT	1041	False	NA	NA	False	AATATA	-15	NA	108280677	108380780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108318512_108318612_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.384	chr5	+	5035	29	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-62	-743	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.4589898485168	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTCTAAAATATAACTAT	1042	False	NA	NA	False	AATAAA	-28	NA	108280678	108380751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108281206_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.385	chr5	+	4603	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-62	-709	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	17.9326586682951	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	1042	False	NA	NA	False	AGTAAA	-3	NA	108280678	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.386	chr5	+	4712	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-58	-750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.9880912987295	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACACTTCTAAAATA	1046	False	NA	NA	False	AATAAA	-21	NA	108280682	108380744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283460_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.387	chr5	+	4545	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-56	-714	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.2330591082365	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAGTCAATTTATT	1048	False	NA	NA	False	AATATA	-15	NA	108280684	108380780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.388	chr5	+	4666	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-55	-626	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	18.3162284590935	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACATTTAGTATTTG	1049	False	NA	NA	False	ACTAAA	-7	NA	108280685	108380868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108368563_108368765_108376445_108376914_108380599
ES.26607.389	chr5	+	5924	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-94	-494	-55	494	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGATGTTTTTGTTTGTT	1049	False	NA	NA	False	NA	NA	NA	108280685	108381988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.390	chr5	+	4578	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-93	851	-54	-851	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTGTTGGTACTGTGC	1050	False	NA	NA	False	ATTAAA	-25	NA	108280686	108380643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.391	chr5	+	4926	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-91	501	-52	-501	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGTTTGCTGTTTATC	1052	False	NA	NA	False	NA	NA	NA	108280688	108380993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.392	chr5	+	4873	30	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-51	-626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	25.2309663842846	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACATTTAGTATTTG	1053	False	NA	NA	False	ACTAAA	-7	NA	108280689	108380868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339763_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108351754_108351843_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.393	chr5	+	4865	30	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-48	23162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	17.7354049791393	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGCAGGGGCTGACTGG	1056	False	NA	NA	False	NA	NA	NA	108280692	108404656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599_108380655_108404374
ES.26607.394	chr5	+	4624	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-46	-692	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	17.8926432835808	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGGTGAAAATTACT	1058	False	NA	NA	False	AGTAAA	-20	NA	108280694	108380802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309520_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.395	chr5	+	5739	30	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-45	485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	21.6799221624588	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGCAATGTGATGTTT	1059	False	NA	NA	False	NA	NA	NA	108280695	108381979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328762_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599_108381699_108381868
ES.26607.398	chr5	+	5554	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-45	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	25.0915670035548	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	1059	False	NA	NA	False	AGTAAA	-3	NA	108280695	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319482_108319700_108321616_108321728_108322504_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.399	chr5	+	5673	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-44	-750	intron_retention	FALSE	canonical	2	47	junction_15	11.3049754150906	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACACTTCTAAAATA	1060	False	NA	NA	False	AATAAA	-21	NA	108280696	108380744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.4	chr5	+	4512	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4980	-4	intron_retention	FALSE	canonical	0	0	junction_5	700.07462771836	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208559	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217390_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.40	chr5	+	2669	3	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4933	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	879.5	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208754_108252291_108252397_108254453
ES.26607.400	chr5	+	3468	7	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-83	75280	-44	-3145	5prime_fragment	FALSE	canonical	2	64	junction_4	9.58152156786987	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTCTTTTGTGTATA	1060	False	NA	NA	False	AATAAA	-14	NA	108280696	108306214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624
ES.26607.401	chr5	+	3313	4	NNC	ENSMUSG00000056531.12	novel	1371	4	NA	NA	-41	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.9502598439355	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACAGAACCAAAT	1063	False	NA	NA	False	AAAAAG	-41	NA	108280699	108287402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108282158_108282370_108283431_108283838_108284011_108286779
ES.26607.402	chr5	+	5584	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-34	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	27.9680028545742	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAATTTATTGATTAT	1070	False	NA	NA	False	AGTAAA	-4	NA	108280706	108380786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108335245_108335609_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.403	chr5	+	7412	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-72	-2004	-33	2004	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTATCTAGTCTAGC	1071	False	NA	NA	False	AATAAA	-15	NA	108280707	108383498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.404	chr5	+	3072	7	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-33	2274	intron_retention	FALSE	canonical	0	0	junction_1	29.5785207353054	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGTATATTTTTTCAAT	1071	False	NA	NA	False	AATAAA	-16	NA	108280707	108311633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332
ES.26607.405	chr5	+	4602	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-33	-709	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.9563561733254	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	1071	False	NA	NA	False	AGTAAA	-3	NA	108280707	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.406	chr5	+	5308	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-32	-715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	22.1521581848112	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTAAGTCAATTTAT	1072	False	NA	NA	False	AATATA	-14	NA	108280708	108380779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363856_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.407	chr5	+	4488	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-22	-750	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.2342628091196	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACACTTCTAAAATA	1082	False	NA	NA	False	AATAAA	-21	NA	108280718	108380744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.408	chr5	+	3545	4	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-61	91631	-22	2422	intron_retention	FALSE	canonical	2	80	junction_2	5.90668171555645	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTCTGTGTTCTGTGA	1082	False	NA	NA	False	AATACA	-19	NA	108280718	108289863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779
ES.26607.409	chr5	+	3056	3	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-61	94889	-22	-836	5prime_fragment	FALSE	canonical	2	80	junction_2	6.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTACTACTATGACTG	1082	False	NA	NA	False	AATAAA	-28	NA	108280718	108286605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838
ES.26607.41	chr5	+	2112	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108208606	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.410	chr5	+	4447	28	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-19	-746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.931970208417	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACTTCTAAAATATAAC	1085	False	NA	NA	False	AATAAA	-25	NA	108280721	108380748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319610_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.411	chr5	+	5771	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-19	-743	intron_retention	FALSE	canonical	0	0	junction_21	25.3495964625934	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTCTAAAATATAACTAT	1085	False	NA	NA	False	AATAAA	-28	NA	108280721	108380751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349419_108349540_108349930_108350048_108354460_108354605_108359959_108360164_108363856_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.412	chr5	+	8947	26	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-13	-756	intron_retention	FALSE	canonical	0	0	junction_23	18.7946375330837	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAGAAACACTTCT	1091	False	NA	NA	False	AATAAA	-15	NA	108280727	108380738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108368563_108368765_108376445_108376914_108380599
ES.26607.413	chr5	+	4530	28	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-13	-714	combination_of_known_splicesites	FALSE	canonical	2	4	junction_23	17.7468094468228	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAGTCAATTTATT	1091	False	NA	NA	False	AATATA	-15	NA	108280727	108380780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.414	chr5	+	1074	4	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-51	94092	-12	-39	5prime_fragment	FALSE	canonical	2	80	junction_2	5.90668171555645	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACAGAACCAAAT	1092	False	NA	NA	False	AAAAAG	-41	NA	108280728	108287402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779
ES.26607.415	chr5	+	6451	29	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-9	492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7138157843887	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGATGTTTTTGTTTG	1095	False	NA	NA	False	NA	NA	NA	108280731	108381986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280820_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.416	chr5	+	6294	28	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-4	-708	intron_retention	FALSE	non_canonical	0	0	junction_2	22.3800567697021	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAATTTATTGATTAT	1100	False	NA	NA	False	AGTAAA	-4	NA	108280736	108380786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108280865_108283287_108283430_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345002_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.417	chr5	+	2443	9	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	-37	70770	2	1365	5prime_fragment	FALSE	canonical	2	64	junction_4	10.4522724801834	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACACCGGTTCTTTCTCT	1106	False	NA	NA	False	AATAAA	-16	NA	108280742	108310724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332
ES.26607.419	chr5	+	4722	21	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	-3141	-714	intron_retention	FALSE	canonical	0	0	junction_8	24.2530410464337	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAGTCAATTTATT	NA	False	NA	NA	False	AATATA	-15	NA	108306403	108380780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108322864_108328263_108328399_108328679_108328762_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368769_108376452_108376914_108380599
ES.26607.42	chr5	+	3543	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-140	intron_retention	FALSE	canonical	0	0	junction_6	763.891412417628	1702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTTTATTTTACGTG	NA	False	NA	-37	True	TATAAA	-20	NA	108208606	108255995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.420	chr5	+	6702	1	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	414	-4994	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACTTAAAAGAATAAACTT	NA	False	NA	NA	False	NA	NA	NA	108309958	108316660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108310000_108316700
ES.26607.422	chr5	+	4544	17	NIC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	9435	-709	intron_retention	FALSE	canonical	3	47	junction_4	12.2365998136737	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCAATTTATTGATTA	6176	False	NA	NA	False	AGTAAA	-3	NA	108318979	108380785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.423	chr5	+	8392	15	NNC	ENSMUSG00000056531.12	novel	5336	29	NA	NA	9551	-743	intron_retention	FALSE	canonical	1	4	junction_8	22.0570919688532	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTCTAAAATATAACTAT	6292	False	NA	NA	False	AATAAA	-28	NA	108319095	108380751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108319700_108321616_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108345837_108349190_108349540_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ES.26607.425	chr5	+	175	1	Intergenic	novelGene_22160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTTAAAAAAAAAAGAA	3787	False	NA	NA	False	NA	NA	NA	108371540	108371715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108371500_108371700
ES.26607.426	chr5	+	215	1	Intergenic	novelGene_22162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTATTTCTTTTAACAA	NA	False	NA	NA	False	NA	NA	NA	108388159	108388374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108388200_108388400
ES.26607.43	chr5	+	3047	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGAGTTGTCTTCTGTTT	NA	False	NA	11	True	AAAAAG	-18	NA	108208606	108256043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.44	chr5	+	4027	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	677.031441908966	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208606	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221339_108228784_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.46	chr5	+	5222	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1263	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTCTGATCATGGGTA	NA	False	NA	NA	False	AGTAAA	-2	NA	108208606	108258133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.47	chr5	+	4181	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-4	intron_retention	FALSE	canonical	0	0	junction_4	742.994321983688	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208606	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.48	chr5	+	8498	12	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	intron_retention	FALSE	canonical	0	0	junction_3	681.081019682608	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208606	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.5	chr5	+	4104	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4974	2	intron_retention	FALSE	canonical	0	0	junction_4	796.308187129135	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208565	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.51	chr5	+	4077	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	681.721859216303	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208606	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.55	chr5	+	2197	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	79	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGGTGTTAGATACTT	NA	False	NA	1	True	ATTAAA	-15	NA	108208606	108255108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.56	chr5	+	2621	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	44	intron_retention	FALSE	canonical	3	182	junction_1	547.456177850489	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCATTGTCGTCTTAA	NA	False	NA	18	True	AATATA	-27	NA	108208606	108255380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.57	chr5	+	4024	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	677.031441908966	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208606	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.58	chr5	+	7420	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-97	intron_retention	FALSE	canonical	0	0	junction_4	631.65767803631	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTAGAGTTGTCTTC	NA	False	NA	6	True	AAAAAG	-13	NA	108208606	108256038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.59	chr5	+	4921	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	non_canonical	0	0	junction_3	759.476139796646	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108215325_108215439_108217027_108217628_108221071_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.6	chr5	+	4051	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4974	51	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAACTGCTTTTATTTA	NA	False	NA	84	True	AATACA	-12	NA	108208565	108256921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.61	chr5	+	3484	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-90	intron_retention	FALSE	canonical	0	0	junction_5	687.180104553202	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTTGTCTTCTGTTTTT	NA	False	NA	13	True	AAAAAG	-20	NA	108208606	108256045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.64	chr5	+	2839	2	NNC	ENSMUSG00000029267.18	novel	3068	16	NA	NA	-4933	2292	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	0	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108208606	108219743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027
ES.26607.66	chr5	+	1298	12	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	canonical	0	0	junction_3	531.849618340491	1622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGGAAAGAAAAAA	NA	False	NA	NA	False	ATTAAA	-38	NA	108208606	108251905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885
ES.26607.67	chr5	+	2732	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	intron_retention	FALSE	canonical	3	182	junction_1	547.456177850489	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGGAGTATATATCCC	NA	False	NA	NA	False	AATACA	-17	NA	108208606	108255491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.69	chr5	+	4039	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	2	intron_retention	FALSE	canonical	0	0	junction_3	680.408158550603	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208606	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.7	chr5	+	3451	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4959	-1	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	1706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTAGCTCTTCATT	NA	False	NA	102	True	AGTAAA	-12	NA	108208580	108256134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.70	chr5	+	3971	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	616.072190475719	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208606	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228674_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.72	chr5	+	2821	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	46	intron_retention	FALSE	canonical	0	0	junction_5	687.180104553202	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTGTCGTCTTAATA	NA	False	NA	20	True	AATATA	-29	NA	108208606	108255382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.73	chr5	+	2546	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	27	intron_retention	FALSE	canonical	0	0	junction_3	704.041747499552	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCTCTGTGACTAGA	NA	False	NA	1	True	AATATA	-10	NA	108208606	108255363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108243066_108243161_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.74	chr5	+	2721	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	727.824401469888	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCTGTGACTAGACTTC	NA	False	NA	5	True	AATATA	-14	NA	108208606	108255367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.75	chr5	+	3195	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	700.88672091541	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTAGAGTTGTCTTC	NA	False	NA	6	True	AAAAAG	-13	NA	108208606	108256038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228775_108228891_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.76	chr5	+	4084	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	218	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	521.57970412498	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGTTTATGTCCTTTC	NA	False	NA	11	True	AAAAAG	-24	NA	108208606	108257088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228787_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.77	chr5	+	4216	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	canonical	0	0	junction_5	729.324192210673	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.78	chr5	+	5577	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1470	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTATGCTAGTATTTCT	NA	False	NA	NA	False	TTTAAA	-21	NA	108208606	108258340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.79	chr5	+	7026	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	canonical	0	0	junction_3	643.753131778445	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108251992_108252131_108252185_108252260_108252397_108254453
ES.26607.80	chr5	+	3209	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	-93	intron_retention	FALSE	canonical	0	0	junction_3	680.408158550603	1705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGAGTTGTCTTCTGTT	NA	False	NA	10	True	AAAAAG	-17	NA	108208606	108256042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.81	chr5	+	2418	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	44053	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	699.808684967224	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGCTTGAAGAGTTGAA	NA	False	NA	NA	False	AATAAA	-35	NA	108208606	108300923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453_108255385_108300893
ES.26607.82	chr5	+	8253	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1	intron_retention	FALSE	canonical	0	0	junction_4	631.65767803631	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208606	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.83	chr5	+	4536	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	375	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	1720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATACCTTCCTTCCTTT	NA	False	NA	NA	False	AATAGA	-13	NA	108208606	108257245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.84	chr5	+	5631	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	1469	intron_retention	FALSE	canonical	0	0	junction_10	693.29097947559	1723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTATGCTAGTATTTC	NA	False	NA	NA	False	TTTAAA	-20	NA	108208606	108258339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242119_108246991_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.86	chr5	+	3371	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTAGCTCTTCATTT	NA	False	NA	103	True	AGTAAA	-13	NA	108208607	108256135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.87	chr5	+	4321	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	215	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAGTGTTTATGTCCT	NA	False	NA	8	True	AAAAAG	-21	NA	108208607	108257085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.89	chr5	+	3900	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	705.483059285463	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTAATGAGTTTTTCTT	NA	False	NA	32	True	ATTAAA	-33	NA	108208607	108256869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228775_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.90	chr5	+	2108	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGAGACTTAATTTTT	NA	False	NA	-78	True	CATAAA	-22	NA	108208607	108255029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234877_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.92	chr5	+	3961	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-145	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGTCTCTAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	108208607	108256725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.93	chr5	+	4275	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	776.449620929028	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108217027_108217230_108220587_108220656_108221172_108221321_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.94	chr5	+	5348	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	616.072190475719	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTATTTCTTACCA	NA	False	NA	NA	False	TTTAAA	-26	NA	108208607	108258345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.95	chr5	+	3470	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	733.569622144036	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251925_108254860
ES.26607.96	chr5	+	3835	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	1	intron_retention	FALSE	canonical	0	0	junction_3	632.644950296843	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGAGTTTTTCTTCT	NA	False	NA	34	True	ATTAAA	-35	NA	108208607	108256871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.97	chr5	+	3860	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	720.988723764747	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTATTTTTAAAA	NA	False	NA	13	True	ATTAAA	-14	NA	108208607	108256850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228673_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248773_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.98	chr5	+	5135	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-4	intron_retention	FALSE	canonical	0	0	junction_3	500.122446545305	1718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTAATGAGTTTTT	NA	False	NA	29	True	ATTAAA	-30	NA	108208607	108256866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26607.99	chr5	+	3953	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	754.613620043765	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTTCTTCTG	NA	False	NA	35	True	ATTAAA	-36	NA	108208607	108256872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108208730_108228775_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ES.26608.1	chr5	-	190	1	Intergenic	novelGene_22151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAGCATCCTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108215205	108215015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108215000_108215200
ES.26609.1	chr5	-	5146	3	Antisense	novelGene_ENSMUSG00000029267.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACGAGCCATTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	108241189	108235577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108238180_108238243_108238910_108239311
ES.2661.1	chr10	-	5173	1	Intergenic	novelGene_2027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTTGGTCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	41291420	41286247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41286200_41291400
ES.2661.2	chr10	-	540	2	Antisense	novelGene_ENSMUSG00000091415.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTGTTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	41291467	41290814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_41291079_41291191
ES.26610.1	chr5	-	175	1	Intergenic	novelGene_22153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	108242591	108242416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108242400_108242600
ES.26611.1	chr5	-	1318	5	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	74	2140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.214622294571	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAAAGGACAATTCTAC	NA	False	NA	NA	False	NA	NA	NA	108280322	108252091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108252120_108271838_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.10	chr5	-	4565	3	FSM	ENSMUSG00000063406.12	ENSMUST00000119437.8	3436	3	-15	-1114	1	-320	multi-exon	FALSE	canonical	3	235	junction_2	11.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGACATTGTTGAAACA	NA	False	NA	NA	False	AATAAA	-19	NA	108280430	108269812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108273951_108277883_108277982_108280101
ES.26611.11	chr5	-	3475	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	4	321	4	-321	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAGACATTGTTGAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	108280482	108269813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.12	chr5	-	3470	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-129	459	-129	-459	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGCTCTGATTTTTGT	NA	False	NA	NA	False	ACTAAA	-14	NA	108280615	108269951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.13	chr5	-	3224	5	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-2	-466	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.214622294571	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCATCACTTGCTCTGA	NA	False	NA	NA	False	ACTAAA	-7	NA	108280451	108269958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108271445_108271519_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.14	chr5	-	3340	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-138	598	-138	-598	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGTTGCCTGTATTA	NA	False	NA	NA	False	AGTAAA	-11	NA	108280624	108270090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.15	chr5	-	2227	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	107.809502776374	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTCTGCCTTTCTG	NA	False	NA	-6	True	AATAAA	-14	NA	108280396	108270924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108272626_108273766_108273900_108277883_108277982_108280101
ES.26611.16	chr5	-	2414	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-46	1432	-46	2	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTCTGCCTTTCTG	NA	False	NA	-6	True	AATAAA	-14	NA	108280532	108270924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.17	chr5	-	2159	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	113.291168627077	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACATTCTGCCTTTCT	NA	False	NA	-7	True	AATAAA	-13	NA	108280395	108270925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108272626_108273883_108273951_108277883_108277982_108280101
ES.26611.18	chr5	-	1515	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-31	2316	-31	-882	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108280517	108271808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.2	chr5	-	4396	1	Genic_Genomic	ENSMUSG00000063406.12	novel	NA	NA	NA	NA	23209	1440	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACAGGACTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	108257187	108252791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_108252800_108257200
ES.26611.20	chr5	-	3199	2	FSM	ENSMUSG00000063406.12	ENSMUST00000119784.2	689	2	-86	-2424	4	2169	multi-exon	FALSE	canonical	3	235	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGCATAACAGTAAAAC	NA	False	NA	NA	False	AAAAAG	-8	NA	108280482	108275163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108277982_108280101
ES.26611.21	chr5	-	5328	1	Genic_Genomic	ENSMUSG00000063406.12	novel	NA	NA	NA	NA	-5	2169	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGCATAACAGTAAAAC	NA	False	NA	NA	False	AAAAAG	-8	NA	108280491	108275163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_108275200_108280500
ES.26611.22	chr5	-	576	3	FSM	ENSMUSG00000063406.12	ENSMUST00000117759.2	482	3	-90	-4	-3	4	multi-exon	FALSE	canonical	3	4	junction_1	115.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTGTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	108280489	108277328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108277419_108277883_108277982_108280101
ES.26611.3	chr5	-	3929	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-46	-83	-46	83	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTATCAAGTTTTTAT	NA	False	NA	83	True	AGTAAA	-29	NA	108280532	108269409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.4	chr5	-	3617	3	NIC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-15	-14	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	115.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTACCAACCTATCATAA	NA	False	NA	-14	True	AATAAA	-17	NA	108280501	108269506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108272626_108277883_108277982_108280101
ES.26611.5	chr5	-	3670	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	113.291168627077	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTACCAACCTATCA	NA	False	NA	-17	True	AATAAA	-14	NA	108280490	108269509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108272626_108273883_108273951_108277883_108277982_108280101
ES.26611.6	chr5	-	5054	3	FSM	ENSMUSG00000063406.12	ENSMUST00000119437.8	3436	3	-201	-1417	-130	-17	multi-exon	FALSE	canonical	3	235	junction_2	11.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTTACCAACCTATCA	NA	False	NA	-17	True	AATAAA	-14	NA	108280616	108269509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108273951_108277883_108277982_108280101
ES.26611.7	chr5	-	3828	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-46	18	-46	-18	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTCTTACCAACCTATC	NA	False	NA	-18	True	AATAAA	-13	NA	108280532	108269510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.8	chr5	-	3663	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-15	152	-15	-152	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATTTTTTTTCTTCTGG	NA	False	NA	NA	False	AATACA	-12	NA	108280501	108269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ES.26611.9	chr5	-	3484	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	-23	-222	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	113.291168627077	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTACCTGTAATTTTGTA	NA	False	NA	NA	False	ATTAAA	-43	NA	108280509	108269714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108272626_108273883_108273951_108277883_108277982_108280101
ES.26612.1	chr5	-	176	1	Intergenic	novelGene_22157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTCAAACTATT	NA	False	NA	NA	False	NA	NA	NA	108310375	108310199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108310200_108310400
ES.26613.1	chr5	-	210	1	Intergenic	novelGene_22158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAAGTATATT	NA	False	NA	NA	False	NA	NA	NA	108337406	108337196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108337200_108337400
ES.26614.1	chr5	-	2833	1	Antisense	novelGene_ENSMUSG00000056531.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAGAAAAGATTACT	NA	False	NA	NA	False	TTTAAA	-11	NA	108343237	108340404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108340400_108343200
ES.26615.1	chr5	-	226	1	Intergenic	novelGene_22159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTGGTTTTTTGA	4898	False	NA	NA	False	NA	NA	NA	108364520	108364294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108364300_108364500
ES.26616.1	chr5	-	209	1	Intergenic	novelGene_22161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTCCTAAACAAGAATTA	NA	False	NA	NA	False	AAAAAG	-8	NA	108373749	108373540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108373500_108373700
ES.26617.1	chr5	+	3102	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	-1	-16	-1	16	multi-exon	FALSE	canonical	3	201	junction_1	9	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATAGGGCAATTTCTG	NA	False	NA	NA	False	AATAAA	-37	NA	108416761	108428408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108417676_108423434_108423599_108426384
ES.26617.2	chr5	+	2485	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	-1	601	-1	-601	multi-exon	FALSE	canonical	3	201	junction_1	9	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTGCCAAGCCATTTA	NA	False	NA	NA	False	AATATA	-18	NA	108416761	108427791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108417676_108423434_108423599_108426384
ES.26617.3	chr5	+	1510	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	8	1567	8	344	multi-exon	FALSE	canonical	3	201	junction_1	9	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTCTTAATCTGTAT	NA	False	NA	NA	False	TATAAA	-17	NA	108416770	108426825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108417676_108423434_108423599_108426384
ES.26617.4	chr5	+	3367	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	18	-300	18	300	multi-exon	FALSE	canonical	3	201	junction_1	9	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTTCTCATCTCAAA	NA	False	NA	NA	False	AATAAA	-11	NA	108416780	108428692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108417676_108423434_108423599_108426384
ES.26617.5	chr5	+	3660	1	NIC	ENSMUSG00000029265.5	novel	3085	3	NA	NA	-3913	-1949	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGATGGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	108420872	108424532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108420900_108424500
ES.26618.1	chr5	-	700	1	Intergenic	novelGene_22163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGAAACATGAACCTT	NA	False	NA	NA	False	NA	NA	NA	108421087	108420387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108420400_108421100
ES.26619.1	chr5	-	3666	1	FSM	ENSMUSG00000106103.2	ENSMUST00000199082.2	1380	1	-15	-2271	-15	2271	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCTTGTCTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	108460630	108456964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108457000_108460600
ES.26619.2	chr5	-	1085	1	FSM	ENSMUSG00000106103.2	ENSMUST00000199082.2	1380	1	-5	300	-5	-300	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	108460620	108459535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108459500_108460600
ES.2662.1	chr10	-	173	1	Antisense	novelGene_ENSMUSG00000091415.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	41310264	41310091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_41310100_41310300
ES.26620.1	chr5	+	4220	12	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	164	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.7210900681349	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACTTTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	108460665	108497220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108495699
ES.26620.10	chr5	+	3249	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	207	1117	180	0	multi-exon	FALSE	canonical	3	51	junction_6	9.64761052742537	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTATTAAAATTTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	108460681	108496104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.12	chr5	+	4138	12	NIC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	184	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	22.3495890841735	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACATTAACTTTTGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	108460685	108497215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.13	chr5	+	2851	12	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	184	-5818	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	20.1330286587788	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	108460685	108490281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484089_108484227_108484428_108486420_108486613_108489660
ES.26620.15	chr5	+	4308	13	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	184	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	21.0297408448131	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACTTTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	108460685	108497220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495755
ES.26620.16	chr5	+	3182	13	Fusion	ENSMUSG00000029263.16_ENSMUSG00000104904.2	novel	4573	13	NA	NA	184	-3255	multi-exon	FALSE	canonical	0	0	junction_12	21.775846711437	807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAGAGCATTATGAAGT	NA	False	NA	NA	False	AATAAA	-43	NA	108460685	108508496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108508157
ES.26620.18	chr5	+	2653	11	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	185	-5823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	28.653970056521	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	108460686	108490276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484089_108484227_108484428_108489660
ES.26620.19	chr5	+	3183	13	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	21.0297408448131	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTATGTATTAAAATT	NA	False	NA	NA	False	AATAAA	-11	NA	108460689	108496099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495755
ES.26620.20	chr5	+	4131	14	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	196	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.581299066097	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTAACTTTTGTCTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	108460697	108497217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466769_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484089_108484227_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495699
ES.26620.21	chr5	+	4198	14	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	202	-7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	18.924327663481	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACATTAACTTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	108460703	108497214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484089_108484227_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.22	chr5	+	5683	12	NIC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	210	-5	intron_retention	FALSE	canonical	3	51	junction_5	9.74976159911971	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTAACTTTTGTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	108460711	108497216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108460945_108461824_108462031_108465128_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.24	chr5	+	7317	10	ISM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	4679	4	4652	-4	intron_retention	FALSE	canonical	3	51	junction_4	9.33465599093699	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTAACTTTTGTCTGTT	3734	False	NA	NA	False	AATAAA	-21	NA	108465153	108497217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089
ES.26620.25	chr5	+	178	1	Intergenic	novelGene_22164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108479580	108479758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108479600_108479800
ES.26620.26	chr5	+	8347	2	ISM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	26273	8	26246	-8	intron_retention	FALSE	canonical	3	62	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACATTAACTTTTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	108486747	108497213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108489971_108492089
ES.26620.27	chr5	+	7864	1	NIC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	28853	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTAACTTTTGTCTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	108489354	108497218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108489400_108497200
ES.26620.28	chr5	+	178	1	Intergenic	novelGene_22165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	108501837	108502015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108501800_108502000
ES.26620.3	chr5	+	4382	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	193	-2	166	2	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTGTCTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-27	NA	108460667	108497223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.4	chr5	+	3004	11	ISM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	197	6940	170	-5818	5prime_fragment	FALSE	canonical	3	51	junction_6	9.76165969494942	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	108460671	108490281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660
ES.26620.5	chr5	+	4370	13	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	175	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.775846711437	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACATTAACTTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	108460676	108497214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492260_108495702
ES.26620.6	chr5	+	6043	10	ISM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	204	6942	177	-5820	intron_retention	FALSE	canonical	3	51	junction_6	9.88826464946088	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	108460678	108490279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420
ES.26620.7	chr5	+	4162	12	NIC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	178	4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	21.9507337176642	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCTGTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	108460679	108497225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108460945_108461824_108462031_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ES.26620.8	chr5	+	7365	13	NNC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	178	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	21.775846711437	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCTGTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	108460679	108497225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108492709
ES.26620.9	chr5	+	4168	12	NIC	ENSMUSG00000029263.16	novel	4573	13	NA	NA	180	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	22.78139011424	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACATTAACTTTTGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	108460681	108497215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108489660_108489971_108492089_108492254_108495702
ES.26621.1	chr5	+	5043	2	ISM	ENSMUSG00000072769.7	ENSMUST00000199724.2	653	3	-4277	1	-1184	0	intron_retention	FALSE	canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATGGACATTCCAGCT	NA	False	NA	NA	False	AGTAAA	-20	NA	108514450	108520673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108518902_108520081
ES.26622.1	chr5	-	1710	1	FSM	ENSMUSG00000105867.3	ENSMUST00000197216.3	1850	1	188	-48	188	48	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAGAATGTCCATCAGC	9929	False	NA	NA	False	ATTAAA	-15	NA	108515600	108513890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108513900_108515600
ES.26623.1	chr5	-	173	1	Intergenic	novelGene_22166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAGTAAAATATC	NA	False	NA	NA	False	NA	NA	NA	108557784	108557611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108557600_108557800
ES.26624.1	chr5	+	155	1	Intergenic	novelGene_22167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATCTTTTTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	108561404	108561559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108561400_108561600
ES.26625.1	chr5	-	349	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	23	-1	23	1	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCTTTACTGTTTG	5525	False	NA	1	True	AATAAA	-25	NA	108582291	108581108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ES.26625.3	chr5	-	1128	1	NIC	ENSMUSG00000050856.17	novel	371	4	NA	NA	16	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTGGCTTCCTCTCTC	5569	False	NA	-10	True	AATAAA	-14	NA	108582247	108581119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108581100_108582200
ES.26625.5	chr5	-	290	4	NNC	ENSMUSG00000050856.17	novel	371	4	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2222.12125881755	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGTGGCTTCCTCTC	5565	False	NA	-12	True	AATAAA	-12	NA	108582251	108581121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108581204_108581596_108581696_108581891_108581941_108582191
ES.26626.1	chr5	-	2266	9	NIC	ENSMUSG00000029490.5	novel	2717	10	NA	NA	9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.40867845869808	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATTCCTGCCTCATAG	NA	False	NA	NA	False	AATAAA	-26	NA	108596733	108588923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108590128_108590889_108591000_108591304_108591463_108591720_108591874_108592336_108592454_108592537_108592676_108593071_108593149_108593801_108593961_108596583
ES.26627.1	chr5	+	4959	11	NNC	ENSMUSG00000033623.14	novel	574	3	NA	NA	-12274	-2620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3935273871229	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108596823	108652222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108596915_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.10	chr5	+	2812	12	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	26	-2628	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.6396572998864	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAATCTCCCAGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	108609123	108652214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222_108649282_108651523
ES.26627.11	chr5	+	3022	8	FSM	ENSMUSG00000033623.14	ENSMUST00000112597.8	2169	8	27	-880	27	880	multi-exon	FALSE	canonical	3	120	junction_2	4.29047354790892	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGTGTTTAAGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	108609124	108637970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701
ES.26627.14	chr5	+	5165	12	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	38	-2615	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	48.4992970895643	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGCAATGTTTTTAC	NA	False	NA	NA	False	AATAAA	-30	NA	108609135	108652227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108647656_108647767_108648222
ES.26627.16	chr5	+	2815	12	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	-34	-2620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.6396572998864	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108609144	108652222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222_108649282_108651507
ES.26627.17	chr5	+	2807	12	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	-34	-2624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.6396572998864	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCCAGTCTGGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	108609144	108652218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222_108649282_108651511
ES.26627.18	chr5	+	5020	11	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	-31	-2626	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	38.8638649647716	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAATCTCCCAGTCTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	108609147	108652216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620254_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.19	chr5	+	2839	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	63	4806	-18	-4806	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAACTTAGTATGGCTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	108609160	108650036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.2	chr5	+	2470	1	Intergenic	novelGene_22168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACCTCTTTCTCGG	NA	False	NA	NA	False	NA	NA	NA	108600292	108602762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108600300_108602800
ES.26627.21	chr5	+	1175	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	68	6465	-13	4221	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTGTATGAGAGAATC	NA	False	NA	NA	False	AATAGA	-11	NA	108609165	108648377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.23	chr5	+	3332	12	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	-9	-2639	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	48.8872881447597	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAACTTAACTAAAAT	NA	False	NA	NA	False	AATAAA	-6	NA	108609169	108652203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108647656_108649290_108651520
ES.26627.24	chr5	+	2843	13	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	2	-2620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.6270475026526	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108609180	108652222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622444_108622510_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648225_108649282_108651505
ES.26627.26	chr5	+	4012	1	Intergenic	novelGene_22169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108614379	108618391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108614400_108618400
ES.26627.27	chr5	+	1679	1	NIC	ENSMUSG00000033623.14	novel	2169	8	NA	NA	-1226	501	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACAAGAGAGGGGGCTG	2820	False	NA	NA	False	NA	NA	NA	108632859	108634538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108632900_108634500
ES.26627.28	chr5	+	5370	4	ISM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	26664	1498	1676	-1498	3prime_fragment	FALSE	canonical	3	114	junction_2	16.5126214353344	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCTTTCCTGATACTG	5722	False	NA	NA	False	GATAAA	-19	NA	108635761	108653344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.3	chr5	+	5092	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	-4	2620	-4	-2620	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108609093	108652222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.30	chr5	+	988	2	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	14908	-2625	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTCCCAGTCTGGCA	NA	False	NA	NA	False	AATAAA	-20	NA	108648993	108652217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108649282_108651517
ES.26627.31	chr5	+	5662	1	ISM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	40082	1	15094	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGGATTCCTCTGTG	NA	False	NA	14	True	AATAAA	-20	NA	108649179	108654841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108649200_108654800
ES.26627.4	chr5	+	3674	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	-4	4038	-4	-4038	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCTTCTTTTACTTTT	NA	False	NA	NA	False	GATAAA	-15	NA	108609093	108650804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.5	chr5	+	1598	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	-3	6113	-3	4573	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAGAGGCTTGCAGCA	NA	False	NA	NA	False	TATAAA	-18	NA	108609094	108648729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.6	chr5	+	3849	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	-2	3861	-2	-3861	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTGGTTTTGCCTTTT	NA	False	NA	24	True	AATATA	-28	NA	108609095	108650981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26627.7	chr5	+	5645	11	NNC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	4	-2625	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	37.6883271053519	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTCCCAGTCTGGCA	NA	False	NA	NA	False	AATAAA	-20	NA	108609101	108652217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108647656
ES.26627.8	chr5	+	4100	10	NIC	ENSMUSG00000033623.14	novel	7708	11	NA	NA	5	-4806	intron_retention	FALSE	canonical	3	114	junction_8	10.3399023325616	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAACTTAGTATGGCTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	108609102	108650036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ES.26628.1	chr5	-	6989	2	Antisense	novelGene_ENSMUSG00000033623.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108635831	108628578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108634281_108634544
ES.26629.1	chr5	-	182	1	Intergenic	novelGene_22170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTCAG	4604	False	NA	NA	False	NA	NA	NA	108656198	108656016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108656000_108656200
ES.2663.1	chr10	+	2957	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	-21	-92	-21	92	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTACTTGAGTGCAAAA	NA	False	NA	96	True	AATATA	-20	NA	41326357	41341662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.10	chr10	+	3925	6	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	7	3	intron_retention	FALSE	canonical	2	2	junction_3	41.9542608086473	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACTTGATCTTTATCAA	NA	False	NA	7	True	AATAAA	-19	NA	41326385	41341573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331673_41332612_41338274_41338357_41339957
ES.2663.11	chr10	+	2806	7	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	14	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.8456915876586	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGGATCTAGACACTCA	NA	False	NA	-42	True	ATTAAA	-29	NA	41326392	41341524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41326527_41327084_41328087_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.12	chr10	+	1211	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-24	1289	-16	-1289	multi-exon	FALSE	canonical	3	104	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTCTCGTTGTCACCT	NA	False	NA	6	True	AATAAA	-15	NA	41326406	41328175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41326527_41327084
ES.2663.14	chr10	+	3822	3	FSM	ENSMUSG00000019826.12	ENSMUST00000215881.2	719	3	-1952	-1151	-1032	5	multi-exon	FALSE	canonical	3	58	junction_2	15	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGATCTTTATCAAAA	NA	False	NA	9	True	AATAAA	-21	NA	41330174	41341575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41332612_41338274_41338357_41340272
ES.2663.15	chr10	+	5263	2	ISM	ENSMUSG00000019826.12	ENSMUST00000215881.2	719	3	1844	-725	1844	-421	3prime_fragment	FALSE	canonical	3	58	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTAGCTTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	41333970	41341149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_41338357_41340272
ES.2663.16	chr10	+	177	1	Intergenic	novelGene_2028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41339116	41339293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41339100_41339300
ES.2663.17	chr10	+	178	3	Intergenic	novelGene_2029	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGACTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	41339116	41368144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41339223_41368038_41368056_41368089
ES.2663.18	chr10	+	3610	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-255	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_2	35.4241128130973	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	8838	False	NA	29	True	AATAAA	-18	NA	41352054	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.19	chr10	+	3602	24	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-207	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.2294546022633	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	8886	False	NA	29	True	AATAAA	-18	NA	41352102	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352369_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.2	chr10	+	2943	8	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	-11	7	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	38.0542040907387	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGATCTTTATCAAAAAG	NA	False	NA	11	True	AATAAA	-23	NA	41326367	41341577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41339957_41340039_41340272
ES.2663.20	chr10	+	4275	21	NIC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	-26	-4	intron_retention	FALSE	canonical	3	163	junction_16	19.6992385639649	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9067	False	NA	25	True	AATAAA	-14	NA	41352283	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362468_41362589_41362664_41362753
ES.2663.21	chr10	+	3424	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	52.4446973581861	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9093	False	NA	29	True	AATAAA	-18	NA	41352309	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.22	chr10	+	3561	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	2	0	2	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9095	False	NA	29	True	AATAAA	-18	NA	41352311	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.23	chr10	+	3551	24	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	50.4345202391976	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9095	False	NA	25	True	AATAAA	-14	NA	41352311	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358209_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.24	chr10	+	3624	24	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	50.5376387463513	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9104	False	NA	25	True	AATAAA	-14	NA	41352320	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361685_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.25	chr10	+	4942	20	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_15	53.8969469119225	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9112	False	NA	27	True	AATAAA	-16	NA	41352328	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361324_41361492_41361761_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.26	chr10	+	4859	20	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_6	54.5551133058271	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9112	False	NA	29	True	AATAAA	-18	NA	41352328	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355769_41356280_41356382_41357129_41357388_41357585_41358286_41358599_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362468_41362589_41362664_41362753
ES.2663.27	chr10	+	3530	24	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_11	49.3412943388409	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9115	False	NA	27	True	AATAAA	-16	NA	41352331	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358608_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.28	chr10	+	7092	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	2703	intron_retention	FALSE	canonical	3	71	junction_2	36.7975542665542	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGACATGGGCCA	9115	False	NA	NA	False	NA	NA	NA	41352331	41365731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.29	chr10	+	3547	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_5	50.3119520293817	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAACAGGGTTTATGCTC	9115	False	NA	23	True	AATAAA	-12	NA	41352331	41363020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.3	chr10	+	2794	7	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	28.5058473533648	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGATCTTTATCAAAA	NA	False	NA	9	True	AATAAA	-21	NA	41326368	41341575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41326462_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.31	chr10	+	5297	17	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-2	intron_retention	FALSE	canonical	3	135	junction_2	30.0247293909537	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9116	False	NA	27	True	AATAAA	-16	NA	41352332	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41362468_41362589
ES.2663.32	chr10	+	4238	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-2	intron_retention	FALSE	canonical	3	135	junction_2	29.1246888395396	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9116	False	NA	27	True	AATAAA	-16	NA	41352332	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361876_41362023_41362468_41362589_41362664_41362753
ES.2663.33	chr10	+	4337	21	NIC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	1	-5	intron_retention	FALSE	canonical	3	163	junction_15	19.4435079139542	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACAGGGTTTATGCTCT	9116	False	NA	24	True	AATAAA	-13	NA	41352332	41363021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.34	chr10	+	3915	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	135	junction_2	28.2751302949656	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	29	True	AATAAA	-18	NA	41352332	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.35	chr10	+	3722	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	23	junction_3	45.6436068138267	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	29	True	AATAAA	-18	NA	41352332	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.36	chr10	+	3606	24	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	46.8391044035137	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGGTTTATGCTCTGT	9116	False	NA	26	True	AATAAA	-15	NA	41352332	41363023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.37	chr10	+	3739	25	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.3201910507869	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	29	True	AATAAA	-18	NA	41352332	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41355897_41356017_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361887_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.38	chr10	+	3236	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_19	55.7638769933033	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9116	False	NA	27	True	AATAAA	-16	NA	41352332	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362367_41362468_41362589_41362664_41362753
ES.2663.39	chr10	+	3424	25	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49.5111519424328	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9116	False	NA	29	True	AATAAA	-18	NA	41352332	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352369_41352484_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.4	chr10	+	3120	7	NNC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	-9	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.5271452786574	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTCCAAAGTATGA	NA	False	NA	-61	True	ATTAAA	-10	NA	41326369	41341505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41326527_41327084_41328087_41331023_41331192_41331673_41331753_41332527_41332612_41338274_41338357_41339957
ES.2663.40	chr10	+	3379	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.6098883791895	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9117	False	NA	25	True	AATAAA	-14	NA	41352333	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.42	chr10	+	4225	22	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	73.5975450640562	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9121	False	NA	27	True	AATAAA	-16	NA	41352337	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41357388_41357585_41357702_41358203_41358286_41358599_41358745_41359436_41359628_41359710_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.43	chr10	+	3469	22	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	6	-4	intron_retention	FALSE	canonical	0	0	junction_10	68.2131845668624	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9121	False	NA	25	True	AATAAA	-14	NA	41352337	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358286_41358599_41358745_41359539_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.44	chr10	+	3482	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	8	-2	intron_retention	FALSE	canonical	3	23	junction_3	53.4084929592795	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9123	False	NA	27	True	AATAAA	-16	NA	41352339	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589
ES.2663.45	chr10	+	5628	15	NIC	ENSMUSG00000019823.18	novel	3408	23	NA	NA	8	-4	intron_retention	FALSE	canonical	3	71	junction_2	40.6761726371615	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9123	False	NA	25	True	AATAAA	-14	NA	41352339	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41362468_41362589_41362664_41362753
ES.2663.46	chr10	+	4218	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	8	-4	intron_retention	FALSE	canonical	3	135	junction_2	28.2407049304012	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9123	False	NA	25	True	AATAAA	-14	NA	41352339	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.47	chr10	+	4470	20	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	8	-5	intron_retention	FALSE	canonical	3	23	junction_3	47.7264249064293	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACAGGGTTTATGCTCT	9123	False	NA	24	True	AATAAA	-13	NA	41352339	41363021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41362468_41362589_41362664_41362753
ES.2663.48	chr10	+	4221	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	8	-4	intron_retention	FALSE	canonical	3	135	junction_2	28.0725153077254	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9123	False	NA	25	True	AATAAA	-14	NA	41352339	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.49	chr10	+	4546	17	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	10	-2	intron_retention	FALSE	canonical	3	71	junction_2	38.9607173958591	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9125	False	NA	27	True	AATAAA	-16	NA	41352341	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41358286_41358599_41358745_41359436_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41362468_41362589
ES.2663.5	chr10	+	3267	6	NIC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	0	-54	intron_retention	FALSE	canonical	3	58	junction_5	14.9986666074021	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGAAACTGGATCTA	NA	False	NA	-50	True	ATTAAA	-21	NA	41326378	41341516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41326527_41327084_41328065_41331023_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.50	chr10	+	3705	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	12	-4	intron_retention	FALSE	canonical	3	135	junction_2	28.0579756931964	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9127	False	NA	25	True	AATAAA	-14	NA	41352343	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.51	chr10	+	3760	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	13	-4	intron_retention	FALSE	canonical	3	23	junction_3	54.4063185668724	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9128	False	NA	25	True	AATAAA	-14	NA	41352344	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.52	chr10	+	3401	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	50.4091728829565	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9128	False	NA	29	True	AATAAA	-18	NA	41352344	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.53	chr10	+	3066	19	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	13	-3	intron_retention	FALSE	canonical	0	0	junction_8	80.3917875542822	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGGTTTATGCTCTGT	9128	False	NA	26	True	AATAAA	-15	NA	41352344	41363023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41361104_41361252_41361390_41361492_41361761_41361876_41362367_41362468_41362589_41362664_41362753
ES.2663.54	chr10	+	3967	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	14	0	intron_retention	FALSE	canonical	3	163	junction_16	19.2245355324884	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9129	False	NA	29	True	AATAAA	-18	NA	41352345	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.55	chr10	+	4647	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	14	-3	intron_retention	FALSE	canonical	3	135	junction_2	28.1138755777285	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGGTTTATGCTCTGT	9129	False	NA	26	True	AATAAA	-15	NA	41352345	41363023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41357388_41357585_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.56	chr10	+	3996	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	71	junction_2	36.2095814232652	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACAGGGTTTATGCTCT	9139	False	NA	24	True	AATAAA	-13	NA	41352355	41363021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.57	chr10	+	4508	20	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	2	-4	intron_retention	FALSE	canonical	3	23	junction_3	55.5527749381082	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9149	False	NA	25	True	AATAAA	-14	NA	41352365	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589
ES.2663.58	chr10	+	3626	25	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.2938336254015	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9149	False	NA	29	True	AATAAA	-18	NA	41352365	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41355897_41356017_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.6	chr10	+	2525	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	-52	3	0	-3	multi-exon	FALSE	canonical	3	104	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATCTTTAGACTCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	41326378	41329461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41326527_41327084
ES.2663.60	chr10	+	3287	23	FSM	ENSMUSG00000019823.18	ENSMUST00000099934.11	3292	23	3	2	3	0	multi-exon	FALSE	canonical	0	0	junction_2	48.6000926775296	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9150	False	NA	29	True	AATAAA	-18	NA	41352366	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41352537_41354005_41354311_41354969_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.61	chr10	+	3286	23	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_10	54.7841934433616	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9151	False	NA	27	True	AATAAA	-16	NA	41352367	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358608_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.62	chr10	+	3354	23	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.2129454522911	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9169	False	NA	27	True	AATAAA	-16	NA	41352385	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358115_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362764
ES.2663.63	chr10	+	3273	22	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.2778917920004	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9185	False	NA	27	True	AATAAA	-16	NA	41352401	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358115_41358286_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.64	chr10	+	4042	24	NNC	ENSMUSG00000019823.18	novel	726	6	NA	NA	250	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50.0581514392996	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9406	False	NA	29	True	AATAAA	-18	NA	41352622	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41353329_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.66	chr10	+	3794	23	NNC	ENSMUSG00000019823.18	novel	537	2	NA	NA	337	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.9101852875439	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9493	False	NA	29	True	AATAAA	-18	NA	41352709	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41353329_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358792_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.67	chr10	+	3374	24	NNC	ENSMUSG00000019823.18	novel	726	6	NA	NA	337	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.401000680197	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9493	False	NA	27	True	AATAAA	-16	NA	41352709	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41352750_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.68	chr10	+	4022	24	NNC	ENSMUSG00000019823.18	novel	726	6	NA	NA	337	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.6254004538421	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	9493	False	NA	27	True	AATAAA	-16	NA	41352709	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41353329_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.69	chr10	+	3586	24	NNC	ENSMUSG00000019823.18	novel	726	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	63.460569303566	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9853	False	NA	29	True	AATAAA	-18	NA	41353069	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41353329_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358608_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.7	chr10	+	2797	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	1	46	1	-46	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGGATCTAGACACTCA	NA	False	NA	-42	True	ATTAAA	-29	NA	41326379	41341524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.70	chr10	+	3339	23	NNC	ENSMUSG00000019823.18	novel	677	3	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	55.4359134124059	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	9897	False	NA	25	True	AATAAA	-14	NA	41353113	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41353329_41354005_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.71	chr10	+	3354	23	ISM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	1674	4	-490	-4	3prime_fragment	FALSE	canonical	3	135	junction_1	27.8183674978949	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41353983	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.72	chr10	+	3146	22	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-486	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_1	35.9988661952976	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	NA	False	NA	29	True	AATAAA	-18	NA	41353987	41363026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.73	chr10	+	3380	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-472	-2	intron_retention	FALSE	canonical	3	71	junction_1	36.8500678425427	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	NA	False	NA	27	True	AATAAA	-16	NA	41354001	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41354311_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362468_41362589_41362664_41362753
ES.2663.74	chr10	+	3244	22	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-472	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.9790884212567	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41354001	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358792_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.75	chr10	+	3287	23	NNC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	-417	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.9979743561423	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41354056	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359706_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.76	chr10	+	2765	21	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	107	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.6427684867247	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41354580	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41354632_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ES.2663.77	chr10	+	2559	19	NNC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	-329	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	53.103468766755	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGGGTTTATGCTCTGT	NA	False	NA	26	True	AATAAA	-15	NA	41355654	41363023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362764
ES.2663.78	chr10	+	5333	8	NIC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	480	-4	intron_retention	FALSE	canonical	3	163	junction_5	24.4481959603216	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41356463	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41358286_41358599_41359628_41359712_41360251_41360371_41360806_41360980_41361252_41361390_41361492_41361761_41362468_41362589
ES.2663.79	chr10	+	2754	15	NIC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	-575	-2	intron_retention	FALSE	canonical	3	163	junction_11	19.9659148325851	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTTATGCTCTGTG	NA	False	NA	27	True	AATAAA	-16	NA	41357127	41363024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41362468_41362589_41362664_41362753
ES.2663.8	chr10	+	5806	6	NIC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	1	4	intron_retention	FALSE	canonical	3	58	junction_5	15.357083056362	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTGATCTTTATCAAA	NA	False	NA	8	True	AATAAA	-20	NA	41326379	41341574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41326527_41327084_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ES.2663.80	chr10	+	3170	8	NNC	ENSMUSG00000019823.18	novel	3292	23	NA	NA	1035	-4	intron_retention	FALSE	canonical	0	0	junction_4	74.3417371168513	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGGGTTTATGCTCTG	NA	False	NA	25	True	AATAAA	-14	NA	41358737	41363022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41359628_41359712_41360251_41360371_41360529_41360728_41360806_41360983_41361252_41361390_41361492_41361761_41362468_41362589
ES.2663.81	chr10	+	4661	1	Genic_Genomic	ENSMUSG00000078451.6	novel	NA	NA	NA	NA	-2687	-6239	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	41363747	41368408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_41363700_41368400
ES.2663.9	chr10	+	3618	6	NIC	ENSMUSG00000019826.12	novel	2844	7	NA	NA	7	6	intron_retention	FALSE	canonical	3	58	junction_5	15.7530949340122	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGATCTTTATCAAAAA	NA	False	NA	10	True	AATAAA	-22	NA	41326385	41341576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41332612_41338274_41338357_41340272
ES.26630.1	chr5	-	178	1	Intergenic	novelGene_22171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCCACCAG	3160	False	NA	NA	False	NA	NA	NA	108657642	108657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108657500_108657600
ES.26631.1	chr5	-	2147	4	FSM	ENSMUSG00000033615.10	ENSMUST00000046892.10	2189	4	39	3	15	-3	multi-exon	FALSE	canonical	3	7	junction_1	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTATTCCTTCCAAG	NA	False	NA	-3	True	AATAAA	-16	NA	108697851	108666422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108668193_108673257_108673434_108696371_108696476_108697754
ES.26632.1	chr5	+	159	1	Intergenic	novelGene_22172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	2525	False	NA	NA	False	NA	NA	NA	108707106	108707265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108707100_108707300
ES.26633.1	chr5	+	2142	1	Antisense	novelGene_ENSMUSG00000062234.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTAGGATCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	108740169	108742311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108740200_108742300
ES.26633.2	chr5	+	1102	2	Antisense	novelGene_ENSMUSG00000062234.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108740173	108742287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_108741217_108742228
ES.26634.1	chr5	+	153	1	Intergenic	novelGene_22174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108753576	108753729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_108753600_108753700
ES.26635.1	chr5	+	3611	9	NNC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	-268	-17	intron_retention	FALSE	canonical	2	5	junction_3	43.5165198516609	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACATTGTTCACACTT	NA	False	NA	4	True	NA	NA	NA	108777367	108794520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787340_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033
ES.26635.10	chr5	+	2345	10	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	41.1801222574169	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	AATAAA	-19	NA	108777699	108795123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.11	chr5	+	1417	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	4	3681	4	-15	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGCATCTGACACTA	NA	False	NA	13	True	ATTAAA	-21	NA	108777701	108792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.12	chr5	+	4771	1	NIC	ENSMUSG00000013495.16	novel	1686	8	NA	NA	5	-8588	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTAGTTGCCAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	108777702	108782473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777700_108782500
ES.26635.13	chr5	+	1346	8	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-160	3045	17	-404	5prime_fragment	FALSE	canonical	3	25	junction_1	39.159016476778	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAATAAATGCTTGGT	NA	False	NA	NA	False	ATTAAA	-13	NA	108777714	108791492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904
ES.26635.14	chr5	+	1998	11	NNC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.010479713227	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGGGTTTCATCGGAA	NA	False	NA	27	True	NA	NA	NA	108777717	108794543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790546_108790646_108790904_108791070_108792033_108792113_108792270_108792559_108793704
ES.26635.15	chr5	+	1725	10	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	20	-16	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	41.1801222574169	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACATTGTTCACACTTT	NA	False	NA	5	True	NA	NA	NA	108777717	108794521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.16	chr5	+	1854	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	20	2082	20	29	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTGTTTTTACCCAT	NA	False	NA	50	True	NA	NA	NA	108777717	108794566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.17	chr5	+	1145	9	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	22	-15	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	44.1572120383522	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGCATCTGACACTA	NA	False	NA	13	True	ATTAAA	-21	NA	108777719	108792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777767_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.18	chr5	+	1896	10	NIC	ENSMUSG00000013495.16	novel	1811	11	NA	NA	23	-17	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	49.4772675074119	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACATTGTTCACACTT	NA	False	NA	4	True	NA	NA	NA	108777720	108794520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.19	chr5	+	1533	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-146	1570	31	-15	5prime_fragment	FALSE	canonical	3	25	junction_1	34.906223577529	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGCATCTGACACTA	NA	False	NA	13	True	ATTAAA	-21	NA	108777728	108792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.2	chr5	+	3633	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-53	1522	9	-3	intron_retention	FALSE	canonical	3	99	junction_1	13.0251418797514	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCTTTTGAACATTGA	NA	False	NA	NA	False	AATAAA	-22	NA	108777644	108795126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.20	chr5	+	2598	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-144	-643	33	51	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGGCTATCTGATGCA	NA	False	NA	NA	False	NA	NA	NA	108777730	108795180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.21	chr5	+	2500	7	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	33	-15	intron_retention	FALSE	canonical	3	99	junction_1	12.7856256093404	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGCATCTGACACTA	NA	False	NA	13	True	ATTAAA	-21	NA	108777730	108792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108791070_108792033
ES.26635.22	chr5	+	2437	11	FSM	ENSMUSG00000013495.16	ENSMUST00000078323.13	2374	11	-69	6	-69	-6	multi-exon	FALSE	canonical	1	7	junction_1	41.0677489034887	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTTCTTTTGAACAT	NA	False	NA	NA	False	AATAAA	-19	NA	108777798	108795123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777910_108786138_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.23	chr5	+	5595	9	NNC	ENSMUSG00000013495.16	novel	714	3	NA	NA	3954	-15	intron_retention	TRUE	non_canonical	0	0	junction_1	44.8091438771151	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGCATCTGACACTA	NA	False	NA	13	True	ATTAAA	-21	NA	108781828	108792967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108781871_108782077_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.24	chr5	+	3261	1	FSM	ENSMUSG00000013495.16	ENSMUST00000198346.2	792	1	-2485	16	160	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTTGCATCTGACACT	NA	False	NA	12	True	ATTAAA	-20	NA	108789705	108792966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108789700_108793000
ES.26635.3	chr5	+	3770	10	ISM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-224	-589	15	-3	intron_retention	FALSE	canonical	3	25	junction_1	34.906223577529	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCTTTTGAACATTGA	NA	False	NA	NA	False	AATAAA	-22	NA	108777650	108795126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
ES.26635.4	chr5	+	4434	1	NIC	ENSMUSG00000013495.16	novel	1686	8	NA	NA	16	-8976	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	108777651	108782085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777700_108782100
ES.26635.5	chr5	+	4125	7	NIC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	24	-16	intron_retention	FALSE	canonical	3	99	junction_1	12.7856256093404	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACATTGTTCACACTTT	NA	False	NA	5	True	NA	NA	NA	108777659	108794521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108791070_108792033
ES.26635.6	chr5	+	1678	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-34	2312	28	-201	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACAGTCCCAGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	108777663	108794336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.7	chr5	+	2465	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	-31	1522	-31	-3	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCTTTTGAACATTGA	NA	False	NA	NA	False	AATAAA	-22	NA	108777666	108795126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26635.8	chr5	+	1594	10	NNC	ENSMUSG00000013495.16	novel	3956	11	NA	NA	-27	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.7172732287393	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAGATTTTGCATCTG	NA	False	NA	7	True	ATTAAA	-15	NA	108777670	108792961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792270
ES.26635.9	chr5	+	2010	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-190	-9	-13	9	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTTTCATCGGAACTG	NA	False	NA	30	True	NA	NA	NA	108777684	108794546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ES.26636.1	chr5	-	6162	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-1	1481	intron_retention	FALSE	canonical	3	9	junction_9	73.9789371111445	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATGGGAGTTGTCCT	NA	False	NA	NA	False	AAGAAA	-45	NA	108777606	108715795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.10	chr5	-	4522	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	98.3808392971738	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTGTAAAGCACTTC	NA	False	NA	-25	True	ATTAAA	-26	NA	108777616	108717276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772233_108772289_108772895_108772958_108777366
ES.26636.11	chr5	-	4439	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_5	68.8331514859245	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTTGTAAAGCACT	NA	False	NA	-27	True	ATTAAA	-24	NA	108777611	108717278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724525_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.12	chr5	-	4059	25	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	78.3029639711465	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTTGTAAAGCACT	NA	False	NA	-27	True	ATTAAA	-24	NA	108777603	108717278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.13	chr5	-	4876	29	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	96.4940782787065	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTTGTAAAGCACT	NA	False	NA	-27	True	ATTAAA	-24	NA	108777605	108717278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108724693_108725116_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.15	chr5	-	4551	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	73.6313808570339	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777613	108717279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717913_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.16	chr5	-	4413	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.3073364272572	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777604	108717279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739049_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.17	chr5	-	5731	26	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	0	intron_retention	FALSE	canonical	3	318	junction_8	28.460948684118	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777616	108717279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.18	chr5	-	4441	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_27	72.1263941650612	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777616	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777388
ES.26636.19	chr5	-	4377	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	74.2823737924511	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777569	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730112_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.2	chr5	-	788	2	Intergenic	novelGene_22173	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTATGGGAGTTGTCC	NA	False	NA	NA	False	AAGAAA	-44	NA	108716684	108715796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108716499_108716598
ES.26636.20	chr5	-	2201	7	NNC	ENSMUSG00000062234.15	novel	4487	26	NA	NA	-2171	-1	intron_retention	FALSE	canonical	0	0	junction_6	146.312925684036	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108730994	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730021_108730335
ES.26636.21	chr5	-	4329	26	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_24	73.7455517302569	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777657	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
ES.26636.22	chr5	-	3599	21	NNC	ENSMUSG00000062234.15	novel	4310	27	NA	NA	-10188	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	85.6387178792396	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	5180	False	NA	-29	True	ATTAAA	-22	NA	108754882	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739626_108740072_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747
ES.26636.23	chr5	-	4516	27	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	75.2476778229832	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777600	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719853_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.24	chr5	-	4471	25	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	-1	intron_retention	FALSE	canonical	3	19	junction_23	75.1456802743104	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777616	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
ES.26636.25	chr5	-	4497	28	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	72.7152403065513	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777609	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.26	chr5	-	4295	27	NNC	ENSMUSG00000062234.15	novel	4310	27	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_26	98.084532133191	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	False	NA	-29	True	ATTAAA	-22	NA	108777613	108717280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777388
ES.26636.3	chr5	-	5571	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-2	1478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	98.8820361060182	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTATGGGAGTTGT	NA	False	NA	NA	False	AAGAAA	-42	NA	108777607	108715798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717454_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771245_108772048_108772109_108772895_108772958_108777366
ES.26636.31	chr5	-	4408	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	74.6266059492235	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTGGCTTGTAAAG	NA	False	NA	-31	True	ATTAAA	-20	NA	108777620	108717282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754804_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.32	chr5	-	4290	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	75.3313489204695	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTGGCTTGTAAAG	NA	False	NA	-31	True	ATTAAA	-20	NA	108777616	108717282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.33	chr5	-	4242	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	70.889420571617	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTGGCTTGTAAAG	NA	False	NA	-31	True	ATTAAA	-20	NA	108777613	108717282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108730714_108730929_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.34	chr5	-	4444	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74.3329919348487	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGTCTCTGGCTTGTAA	NA	False	NA	-33	True	ATTAAA	-18	NA	108777540	108717284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717884_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.35	chr5	-	4674	27	NNC	ENSMUSG00000062234.15	novel	4487	26	NA	NA	-8	0	intron_retention	FALSE	canonical	3	9	junction_9	95.7603950202685	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777613	108717285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.36	chr5	-	4344	27	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	114.804702963272	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777613	108717285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.37	chr5	-	4323	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.5085590870544	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777607	108717285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717697_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.39	chr5	-	4072	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	72.9308445945778	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777599	108717285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717454_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.4	chr5	-	4690	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-198	-39	-182	36	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATTTGTTCCTCGGTT	NA	False	NA	11	True	NA	NA	NA	108777803	108717240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.40	chr5	-	5740	26	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-36	0	intron_retention	FALSE	non_canonical	0	0	junction_6	102.479375485997	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777657	108717285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731014_108732102_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740070_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.42	chr5	-	5423	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	-1	intron_retention	FALSE	canonical	3	318	junction_9	28.009006370627	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777620	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.43	chr5	-	4457	26	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	122.287111340484	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777603	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754804_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771245_108772048_108772109_108772895_108772958_108777366
ES.26636.44	chr5	-	4084	24	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	105.770733263615	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777627	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108777366
ES.26636.46	chr5	-	4300	27	NNC	ENSMUSG00000062234.15	novel	4310	27	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	99.9274070832949	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777606	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719949_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.49	chr5	-	4467	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	74.59384308783	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777616	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750699_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.5	chr5	-	4360	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-7	28	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	73.3449033817007	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGTCACCTATTTGTT	NA	False	NA	3	True	NA	NA	NA	108777628	108717248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.52	chr5	-	6094	25	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_24	78.5504084436654	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777604	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772955_108777366
ES.26636.53	chr5	-	5048	26	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	2	-1	intron_retention	FALSE	canonical	3	9	junction_8	97.6518223076252	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777603	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108731016_108732097_108732245_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.54	chr5	-	3662	8	NIC	ENSMUSG00000062234.15	novel	4310	27	NA	NA	-4466	-1	intron_retention	FALSE	canonical	3	349	junction_6	20.7295510253909	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108733289	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108731016_108732097_108732245_108733206
ES.26636.57	chr5	-	4503	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	74.6435149292131	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777609	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771294_108772048_108772109_108772895_108772958_108777366
ES.26636.59	chr5	-	7506	17	NIC	ENSMUSG00000062234.15	novel	4487	26	NA	NA	-6106	-1	intron_retention	FALSE	canonical	2	8	junction_4	93.3258530298545	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	9262	False	NA	-35	True	ATTAAA	-16	NA	108750800	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108724693_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709
ES.26636.6	chr5	-	4696	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-25	16	intron_retention	FALSE	canonical	3	318	junction_9	27.9418246027381	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTAGTACCTGGT	NA	False	NA	-9	True	ATTAAA	-42	NA	108777646	108717260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.61	chr5	-	4462	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	74.1166914440822	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777613	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771249_108772048_108772109_108772895_108772958_108777366
ES.26636.62	chr5	-	4270	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	92.2339527550258	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCAGTCTCTGGCTTGT	NA	False	NA	-35	True	ATTAAA	-16	NA	108777616	108717286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717454_108717635_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.63	chr5	-	5201	21	NNC	ENSMUSG00000062234.15	novel	4310	27	NA	NA	-12559	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.525281051827	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCAGTCTCTGGCTTG	2809	False	NA	-36	True	ATTAAA	-15	NA	108757253	108717287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108755545
ES.26636.65	chr5	-	4384	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.2984794646979	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCAGTCTCTGGCTTG	NA	False	NA	-36	True	ATTAAA	-15	NA	108777603	108717287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108730760_108730818_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.66	chr5	-	4392	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	73.2984794646979	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCAGTCTCTGGCTTG	NA	False	NA	-36	True	ATTAAA	-15	NA	108777609	108717287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744677_108744733_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.67	chr5	-	5510	26	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	33	-3	intron_retention	FALSE	canonical	3	318	junction_8	28.4946591486896	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777526	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.69	chr5	-	4832	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	318	junction_9	27.7453818322573	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777608	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.7	chr5	-	4769	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	6	15	intron_retention	FALSE	canonical	0	0	junction_23	100.036413123509	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTACCTAGTACCTGG	NA	False	NA	-10	True	ATTAAA	-41	NA	108777599	108717261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108769634_108769756_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.70	chr5	-	3936	27	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	98.7352940139628	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777613	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717454_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.71	chr5	-	4421	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	-3	intron_retention	FALSE	canonical	3	14	junction_7	93.4369501259219	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777620	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108730714_108730929_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.72	chr5	-	4137	25	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	101.56330127889	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777620	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
ES.26636.73	chr5	-	4258	10	ISM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	42249	9	4181	-3	3prime_fragment	FALSE	canonical	3	348	junction_7	22.0812193257886	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108735356	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206
ES.26636.74	chr5	-	4322	27	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_14	93.7712263938586	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCAGTCTCTGGCTT	NA	False	NA	-37	True	ATTAAA	-14	NA	108777611	108717288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.80	chr5	-	4332	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.2984794646979	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTGCAGTCTCTGGC	NA	False	NA	-39	True	ATTAAA	-12	NA	108777627	108717290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108730641_108730772_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.81	chr5	-	4408	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.5025405618735	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTGCAGTCTCTGGC	NA	False	NA	-39	True	ATTAAA	-12	NA	108777618	108717290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732139_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.83	chr5	-	4636	27	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_16	101.219575018195	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTGCAGTCTCTGGC	NA	False	NA	-39	True	ATTAAA	-12	NA	108777609	108717290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750699_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772955_108777366
ES.26636.85	chr5	-	4425	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	74.4572128353585	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTGCAGTCTCTGGC	NA	False	NA	-39	True	ATTAAA	-12	NA	108777602	108717290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739620_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.86	chr5	-	4259	26	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_25	99.48729366105	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGGTGCAGTCTCTGG	NA	False	NA	-40	True	ATTAAA	-11	NA	108777620	108717291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777388
ES.26636.88	chr5	-	4306	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	-23	170	-7	-164	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTGTGATTTACTTG	NA	False	NA	NA	False	NA	NA	NA	108777628	108717449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.89	chr5	-	4071	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	11	-172	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	73.3449033817007	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTCACAGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	108777548	108717457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26636.9	chr5	-	5064	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	-8	0	intron_retention	TRUE	canonical	1	4	junction_5	113.183015782972	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTGTAAAGCACTTC	NA	False	NA	-25	True	ATTAAA	-26	NA	108777613	108717276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108724693_108725116_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764913_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ES.26637.1	chr5	-	180	1	Intergenic	novelGene_22175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATATGTACCTTTATG	NA	False	NA	NA	False	NA	NA	NA	108780774	108780594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_108780600_108780800
ES.26638.1	chr5	-	4929	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	21	-12	21	12	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCAAAGTGTGAACAATG	NA	False	NA	NA	False	AATAAA	-23	NA	108808656	108794546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.10	chr5	-	5649	19	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	7	1	intron_retention	FALSE	canonical	3	9	junction_16	12.5664898307629	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808670	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797356_108797452_108798246_108798355_108798505_108798682_108798835_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.11	chr5	-	4524	23	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	11.7072591734945	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808662	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.12	chr5	-	4471	4	ISM	ENSMUSG00000004815.13	ENSMUST00000123669.8	3599	10	1622	-1	1466	1	intron_retention	FALSE	canonical	3	43	junction_2	8.60232526704263	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108799892	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452
ES.26638.13	chr5	-	4739	22	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	24	1	intron_retention	FALSE	canonical	3	33	junction_4	9.43097612432543	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808653	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.14	chr5	-	4202	21	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	14.6731046476197	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808668	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.15	chr5	-	5435	21	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	50	1	intron_retention	FALSE	canonical	3	9	junction_18	12.1830825327583	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808627	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798505_108798682_108798835_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.16	chr5	-	4552	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.1266085200889	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808650	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800370_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.17	chr5	-	7026	11	NNC	ENSMUSG00000004815.13	novel	5345	21	NA	NA	100	0	intron_retention	FALSE	canonical	0	0	junction_3	17.3323397151106	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808577	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108798835_108800259_108801653_108801945_108802012_108802221_108802277_108802409_108802501_108802581_108803231_108803305_108803460_108803709_108804390_108806071_108806152_108808308
ES.26638.18	chr5	-	4253	21	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.7437312874153	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808635	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798682_108798835_108800259_108800420_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802496_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.19	chr5	-	3275	14	NIC	ENSMUSG00000004815.13	novel	4801	22	NA	NA	736	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	17.8275765376874	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108802263	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108799757_108799865_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221
ES.26638.2	chr5	-	4622	22	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	43	5	intron_retention	FALSE	canonical	3	33	junction_4	9.43097612432543	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTGTCTTTGTCTAA	NA	False	NA	2	True	AATACA	-27	NA	108808634	108794907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.20	chr5	-	6933	19	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	33	junction_4	9.70999230778706	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808676	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.21	chr5	-	6290	20	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	7	0	intron_retention	FALSE	canonical	3	33	junction_4	8.68277500096896	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808670	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.22	chr5	-	4890	21	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	62	0	intron_retention	FALSE	canonical	3	33	junction_4	9.33528253455673	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808615	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108804390_108806071_108806152_108808308
ES.26638.23	chr5	-	4351	22	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.9523177970343	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808634	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797499_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801089_108801939_108802012_108802221_108802277_108802409_108802496_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.24	chr5	-	5069	19	NNC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	21	0	intron_retention	FALSE	canonical	1	1	junction_15	13.5615879109589	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808656	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797600_108797690_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803438_108803709_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.25	chr5	-	4481	13	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	290	0	intron_retention	FALSE	canonical	0	0	junction_6	15.3043203776653	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108802709	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798361_108798505_108798682_108798835_108800259_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581
ES.26638.26	chr5	-	6542	11	NIC	ENSMUSG00000004815.13	novel	5345	21	NA	NA	-58	0	intron_retention	FALSE	canonical	3	33	junction_4	9.06862723900371	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108803057	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973
ES.26638.27	chr5	-	4499	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.1266085200889	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808607	108794912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801638_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.28	chr5	-	6082	18	NNC	ENSMUSG00000004815.13	novel	5345	21	NA	NA	8	-1	intron_retention	FALSE	canonical	1	1	junction_6	14.2496281745941	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108808669	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798850_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108804390_108806071_108806152_108808308
ES.26638.29	chr5	-	5516	20	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	47	-1	intron_retention	FALSE	canonical	3	9	junction_17	12.4979776757434	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108808630	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797356_108797452_108797600_108797690_108798246_108798355_108798505_108798682_108798835_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.3	chr5	-	4823	22	NNC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	-17	3	intron_retention	FALSE	canonical	0	0	junction_1	12.5374721781059	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACTCTTGTCTTTGTCT	NA	False	NA	0	True	AATACA	-25	NA	108808694	108794909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797066_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.30	chr5	-	5470	21	NNC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	40	-1	intron_retention	FALSE	canonical	2	7	junction_6	12.6427845034233	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108808637	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798486_108798682_108798835_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.31	chr5	-	2270	2	NIC	ENSMUSG00000004815.13	novel	3599	10	NA	NA	530	-1	intron_retention	FALSE	canonical	3	43	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108797263	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108797164_108797243
ES.26638.32	chr5	-	3766	18	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	404	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0971879493245	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108803459	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797066_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305
ES.26638.33	chr5	-	4412	22	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.3754437059511	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108808644	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801089_108801939_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.34	chr5	-	5301	20	NIC	ENSMUSG00000004815.13	novel	5345	21	NA	NA	27	-1	intron_retention	FALSE	canonical	3	33	junction_4	9.36901240002384	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACTCTTGTCTTT	NA	False	NA	-4	True	AATACA	-21	NA	108808650	108794913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108804390_108806071_108806152_108808308
ES.26638.35	chr5	-	5256	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	39	-2	intron_retention	FALSE	canonical	1	1	junction_8	17.9574796221565	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808638	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798486_108798682_108798835_108799757_108799865_108800259_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.36	chr5	-	4078	20	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	13.1671546363987	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808653	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.37	chr5	-	4572	22	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	39	-2	intron_retention	FALSE	canonical	3	9	junction_19	11.7897299556141	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808638	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.38	chr5	-	5768	20	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	11	-2	intron_retention	FALSE	canonical	3	9	junction_17	12.4966477499428	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808666	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798505_108798682_108798835_108800259_108801086_108801501_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.39	chr5	-	4582	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	12.8104425378879	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808662	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798850_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.4	chr5	-	6822	20	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	39	3	intron_retention	FALSE	canonical	3	33	junction_4	9.51103747206444	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACTCTTGTCTTTGTCT	NA	False	NA	0	True	AATACA	-25	NA	108808638	108794909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.40	chr5	-	4666	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.1266085200889	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808674	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800463_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.41	chr5	-	4551	22	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	38	-2	intron_retention	FALSE	canonical	1	1	junction_17	14.4556558617919	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGCTGACTCTTGTCTT	NA	False	NA	-5	True	AATACA	-20	NA	108808639	108794914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803438_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.42	chr5	-	4758	23	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.9952311660028	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAGCTGACTCTTGTCT	NA	False	NA	-6	True	AATACA	-19	NA	108808664	108794915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804053_108804390_108806071_108806152_108808308
ES.26638.43	chr5	-	5991	9	NIC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	558	-3	intron_retention	FALSE	canonical	3	37	junction_4	9.30641579771719	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAGCTGACTCTTGTCT	NA	False	NA	-6	True	AATACA	-19	NA	108802441	108794915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797792_108798066_108798246_108798355_108801653_108801949_108802012_108802221_108802277_108802409
ES.26638.44	chr5	-	6893	17	NIC	ENSMUSG00000004815.13	novel	5345	21	NA	NA	42	-4	intron_retention	FALSE	canonical	3	9	junction_14	11.3906142832597	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATAGCTGACTCTTGTC	NA	False	NA	-7	True	AATACA	-18	NA	108808635	108794916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108797356_108797452_108797600_108797690_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803952_108804289_108804390_108806071_108806152_108808308
ES.26638.45	chr5	-	8260	12	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	39	-5	intron_retention	FALSE	canonical	3	33	junction_2	8.29019135649309	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATAGCTGACTCTTGT	NA	False	NA	-8	True	AATACA	-17	NA	108808638	108794917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108797356_108797452_108797600_108797690_108801653_108801949_108802012_108802221_108802277_108802409_108802803_108802973_108803075_108803155_108803460_108803709_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.46	chr5	-	4446	22	NNC	ENSMUSG00000004815.13	novel	4938	23	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	16.1115724384651	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCCCATAGCTGACTC	NA	False	NA	-12	True	AATACA	-13	NA	108808650	108794921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804311_108804390_108808308
ES.26638.47	chr5	-	4372	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	8	558	8	23	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCATTTTTATTTCA	NA	False	NA	NA	False	AAGAAA	-14	NA	108808669	108795116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.5	chr5	-	5539	9	NIC	ENSMUSG00000004815.13	novel	4801	22	NA	NA	721	2	intron_retention	FALSE	canonical	3	33	junction_3	11.0219950553427	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGACTCTTGTCTTTGTC	NA	False	NA	-1	True	AATACA	-24	NA	108802278	108794910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108801086_108801501_108801653_108801949_108802012_108802221
ES.26638.6	chr5	-	6539	10	NIC	ENSMUSG00000004815.13	novel	4529	20	NA	NA	-269	2	intron_retention	FALSE	canonical	3	37	junction_3	7.5096645549848	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGACTCTTGTCTTTGTC	NA	False	NA	-1	True	AATACA	-24	NA	108803268	108794910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797356_108797452_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155
ES.26638.7	chr5	-	5431	20	NIC	ENSMUSG00000004815.13	novel	5213	22	NA	NA	24	2	intron_retention	FALSE	canonical	3	33	junction_4	9.54127932094708	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGACTCTTGTCTTTGTC	NA	False	NA	-1	True	AATACA	-24	NA	108808653	108794910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108798246_108798355_108798835_108800259_108800376_108801046_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26638.8	chr5	-	2910	10	NNC	ENSMUSG00000004815.13	novel	4801	22	NA	NA	271	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.485684025171	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108801087	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798361_108798505_108798682_108798835_108800259_108800376_108801046
ES.26638.9	chr5	-	4610	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	-25	353	-25	1	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGACTCTTGTCTTTGT	NA	False	NA	-2	True	AATACA	-23	NA	108808702	108794911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ES.26639.1	chr5	+	3370	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	3	0	3	0	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108816974	108832423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.10	chr5	+	3265	13	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	4	2	intron_retention	FALSE	canonical	2	36	junction_10	7.17441441667696	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108817164	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.11	chr5	+	5473	12	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-6	2098	intron_retention	FALSE	canonical	2	36	junction_10	7.23741426818005	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGGTTGTCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	108817170	108834521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918
ES.26639.13	chr5	+	3170	12	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-3	2	intron_retention	FALSE	canonical	2	5	junction_2	15.622086505229	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108817173	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.14	chr5	+	3548	18	Fusion	ENSMUSG00000008090.15_ENSMUSG00000033540.19	novel	3536	15	NA	NA	-3	-406	multi-exon	FALSE	canonical	0	0	junction_13	29.6186839003045	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGTGTGACTTTGCA	NA	False	NA	NA	False	NA	NA	NA	108817173	108854356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.15	chr5	+	4095	17	Fusion	ENSMUSG00000008090.15_ENSMUSG00000033540.19	novel	3536	15	NA	NA	-3	25	intron_retention	FALSE	canonical	0	0	junction_12	30.2401197707615	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108817173	108854815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.16	chr5	+	6826	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	202	-3655	-3	3655	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGAGTGGTCAAGTCC	NA	False	NA	NA	False	NA	NA	NA	108817173	108836078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.17	chr5	+	3092	12	NNC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_1	20.6269501958037	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108817177	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108818058_108818126_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.18	chr5	+	3227	13	NNC	ENSMUSG00000033540.19	novel	3536	15	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_9	15.7751122552794	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACCTGGCCTCCCAAG	NA	False	NA	12	True	NA	NA	NA	108817183	108832418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829643_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.2	chr5	+	3218	14	NNC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	15.4195756624321	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTACCTGGCCTCCCAA	NA	False	NA	11	True	NA	NA	NA	108817132	108832417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829672_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.20	chr5	+	3939	18	Fusion	ENSMUSG00000008090.15_ENSMUSG00000033540.19	novel	3536	15	NA	NA	4	0	multi-exon	FALSE	canonical	0	0	junction_13	29.6186839003045	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108817216	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.21	chr5	+	4022	16	Fusion	ENSMUSG00000008090.15_ENSMUSG00000033540.19	novel	3536	15	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_11	31.1709266250888	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108817294	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.22	chr5	+	2901	13	NNC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	19.708113106592	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTACCTGGCCTCCCA	NA	False	NA	10	True	NA	NA	NA	108817323	108832416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108817984_108818126_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829564_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.23	chr5	+	2663	13	NNC	ENSMUSG00000033540.19	novel	3536	15	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.2506830448126	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACCTGGCCTCCCAAG	NA	False	NA	12	True	NA	NA	NA	108817358	108832418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828864_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.24	chr5	+	2726	7	NNC	ENSMUSG00000033540.19	novel	3022	13	NA	NA	-1288	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	24.4364254523629	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108829182	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108829459_108829537_108829660_108829767_108829894_108829965_108830161_108830253_108830500_108830546_108831020_108831132
ES.26639.25	chr5	+	1855	6	NNC	ENSMUSG00000033540.19	novel	3022	13	NA	NA	-1188	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	19.7423402868049	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACCTGGCCTCCCAAG	NA	False	NA	12	True	NA	NA	NA	108829282	108832418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108829459_108829537_108829660_108829767_108829861_108829965_108830043_108830918_108831020_108831132
ES.26639.26	chr5	+	2163	6	NNC	ENSMUSG00000008090.15	novel	556	2	NA	NA	172	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1932121484737	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATTCTGGTGTTTTT	NA	False	NA	23	True	AAGAAA	-10	NA	108840419	108854809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108840462_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.27	chr5	+	3023	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-641	-53	-369	25	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108841726	108854815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.28	chr5	+	2583	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-72	25	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108842023	108854815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.29	chr5	+	2223	7	NNC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1644067277221	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842045	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108842399_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853174_108853356_108853439_108853681
ES.26639.3	chr5	+	3270	11	NNC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-10	2	intron_retention	FALSE	canonical	0	0	junction_7	21.6261415883648	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108817150	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817384_108817984_108818126_108827569_108827678_108827976_108828617_108828726_108828944_108829245_108829459_108829537_108829664_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.30	chr5	+	2454	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-39	10	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	43.0041858427758	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCCTTTTCTCATTCT	NA	False	NA	14	True	AAGAAA	-1	NA	108842056	108854800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108842399_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.31	chr5	+	2399	6	FSM	ENSMUSG00000008090.15	ENSMUST00000112560.8	2318	6	-71	-10	-33	10	multi-exon	FALSE	canonical	2	5	junction_2	42.3820716813135	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCCTTTTCTCATTCT	NA	False	NA	14	True	AAGAAA	-1	NA	108842062	108854800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108842399_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.32	chr5	+	2246	6	NNC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	-30	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	52.3625820600933	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATTGCCTCCTTTTCT	NA	False	NA	8	True	NA	NA	NA	108842065	108854794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108842255_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.33	chr5	+	2379	7	NNC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	-30	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.3928624057931	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTCCTTTTCTCAT	NA	False	NA	11	True	NA	NA	NA	108842065	108854797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108842255_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.34	chr5	+	2152	5	NIC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	47.887889909663	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842075	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108842399_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.35	chr5	+	2090	7	NNC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.3898498408651	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842103	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108842204_108842318_108842399_108842903_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.36	chr5	+	1959	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	-264	634	8	390	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTGTCCTGAGGTA	NA	False	NA	NA	False	AATACA	-11	NA	108842103	108854128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.37	chr5	+	2506	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-70	0	intron_retention	FALSE	canonical	3	66	junction_1	18.2756668824971	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842297	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853439_108853681
ES.26639.38	chr5	+	2129	5	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	8782	-53	-1790	25	3prime_fragment	FALSE	canonical	3	102	junction_1	6.57647321898295	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGTGTTTTTACCTGG	NA	False	NA	29	True	AAGAAA	-16	NA	108851149	108854815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.39	chr5	+	2168	2	FSM	ENSMUSG00000008090.15	ENSMUST00000199802.2	556	2	-555	-1057	-555	5	multi-exon	FALSE	canonical	3	109	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATTGCCTCCTTTTCTC	NA	False	NA	9	True	NA	NA	NA	108852384	108854795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108853439_108853681
ES.26639.40	chr5	+	1902	4	ISM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	10092	-28	-480	0	3prime_fragment	FALSE	canonical	3	107	junction_2	5.71547606649408	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108852459	108854790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_108852614_108852720_108853006_108853084_108853439_108853681
ES.26639.5	chr5	+	3678	9	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	5	junction_2	16.6990830586592	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGGCCTCCCAAGTCT	NA	False	NA	15	True	NA	NA	NA	108817151	108832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827569_108827678_108827976_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.6	chr5	+	5294	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	180	-2101	-9	2101	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTTGTCTGAGTGAATT	NA	False	NA	NA	False	NA	NA	NA	108817151	108834524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.7	chr5	+	3442	11	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-8	-16	intron_retention	FALSE	canonical	2	36	junction_8	6.38435587980495	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAATCTTGCCACACAT	NA	False	NA	-4	True	NA	NA	NA	108817152	108832402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.8	chr5	+	3126	14	NNC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5464564352237	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108817153	108832423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_108817319_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.26639.9	chr5	+	3083	14	NIC	ENSMUSG00000033540.19	novel	3373	14	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	14.961489025032	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGGCCTCCCAAGTC	NA	False	NA	14	True	NA	NA	NA	108817158	108832420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828260_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ES.2664.1	chr10	-	1193	1	Intergenic	novelGene_2030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAACAGGGGCTAAAGT	NA	False	NA	NA	False	NA	NA	NA	41343704	41342511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41342500_41343700
ES.26640.1	chr5	-	2707	1	Antisense	novelGene_ENSMUSG00000033540.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAACAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	108828819	108826112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108826100_108828800
ES.26641.1	chr5	-	580	2	Antisense	novelGene_ENSMUSG00000033540.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTAAATTTAGACTC	NA	False	NA	NA	False	NA	NA	NA	108834293	108831779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_108832160_108834093
ES.26642.1	chr5	+	2086	4	Intergenic	novelGene_22176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	8.25967446224258	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	109614923	109627430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109615053_109624129_109624257_109624444_109624506_109625661
ES.26642.2	chr5	+	2678	4	Intergenic	novelGene_22177	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	6.94422221866655	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	109614940	109627432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109615053_109624129_109624257_109624444_109624506_109625054
ES.26642.3	chr5	+	590	4	Intergenic	novelGene_22178	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	8.52447456836295	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCAGTGACAGGTATCT	NA	False	NA	NA	False	NA	NA	NA	109614946	109624644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109615053_109618707_109618865_109624129_109624257_109624444
ES.26642.4	chr5	+	561	5	Intergenic	novelGene_22179	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	7.58287544405155	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTCTCAGTGTGATAC	NA	False	NA	NA	False	NA	NA	NA	109614946	109625164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109615053_109618707_109618865_109624129_109624257_109624444_109624506_109625054
ES.26642.5	chr5	+	2893	2	Genic_Genomic	ENSMUSG00000105303.2	novel	584	1	NA	NA	-6315	573	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTCCCAGATAGGCTG	NA	False	NA	NA	False	AATAAA	-13	NA	109614946	109622418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_109615053_109619631
ES.26642.6	chr5	+	6854	2	Genic_Genomic	ENSMUSG00000105303.2	novel	584	1	NA	NA	-733	5589	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	109620528	109627434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_109622998_109623049
ES.26643.1	chr5	+	176	1	Intergenic	novelGene_22180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATAATCTTGTC	NA	False	NA	NA	False	NA	NA	NA	109643534	109643710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109643500_109643700
ES.26644.1	chr5	+	2807	4	Antisense	novelGene_ENSMUSG00000093688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	109674932	109695527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_109675528_109675987_109676152_109676288_109676995_109694185
ES.26644.2	chr5	+	3225	5	Antisense	novelGene_ENSMUSG00000093688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTAAGAAAGAGATAGAG	NA	False	NA	NA	False	TTTAAA	-11	NA	109674933	109695540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_109675524_109675988_109676995_109678835_109678984_109679177_109679270_109694151
ES.26644.3	chr5	+	2956	3	Antisense	novelGene_ENSMUSG00000093688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTAAGAAAGAGATAGAG	NA	False	NA	NA	False	TTTAAA	-11	NA	109674933	109695540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_109675528_109675987_109676995_109694185
ES.26644.5	chr5	+	3109	4	Antisense	novelGene_ENSMUSG00000093688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTAAGAAAGAGATAGAG	NA	False	NA	NA	False	TTTAAA	-11	NA	109674933	109695540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_109675528_109675987_109676992_109678829_109678984_109694183
ES.26644.6	chr5	+	3133	4	Antisense	novelGene_ENSMUSG00000093688.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGTAAGAAAGAGATAGAG	NA	False	NA	NA	False	TTTAAA	-11	NA	109674933	109695540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_109675526_109675989_109676995_109678836_109678982_109694149
ES.26645.1	chr5	-	6386	4	NNC	ENSMUSG00000093688.2	novel	1280	2	NA	NA	-19092	1896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGTCTCTTGTGATTCCT	NA	False	NA	NA	False	NA	NA	NA	109696428	109673429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109673644_109674603_109675524_109675976_109678984_109694183
ES.26645.10	chr5	-	1228	3	Intergenic	novelGene_22181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGCTACATGCATTTTA	NA	False	NA	-8	True	AATAAA	-13	NA	109699750	109695920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109696818_109699328_109699436_109699526
ES.26645.11	chr5	-	1408	4	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	917	1630	intron_retention	FALSE	canonical	1	1	junction_2	26.1321428300262	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCAGTAAGGCTCTCG	NA	False	NA	NA	False	AATAAA	-28	NA	109701105	109698127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109698395_109699328_109700241_109700506_109700560_109700929
ES.26645.12	chr5	-	569	3	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2236	1630	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	21	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGCAGTAAGGCTCTCG	NA	False	NA	NA	False	AATAAA	-28	NA	109699786	109698127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109698395_109699328_109699371_109699526
ES.26645.13	chr5	-	593	5	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	-11	1628	intron_retention	FALSE	canonical	3	3	junction_4	22.0510770711999	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACGCAGTAAGGCTCT	NA	False	NA	NA	False	AATAAA	-26	NA	109702033	109698129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109698395_109699328_109699371_109700490_109700560_109700929_109701046_109701932
ES.26645.14	chr5	-	384	3	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2239	1627	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	30	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGACACGCAGTAAGGCTC	NA	False	NA	NA	False	AATAAA	-25	NA	109699783	109698130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109698395_109699328_109699371_109699705
ES.26645.15	chr5	-	499	4	Genic_Genomic	ENSMUSG00000106028.2	novel	489	6	NA	NA	947	1621	multi-exon	FALSE	canonical	3	5	junction_2	24.2624538467705	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCGGGACACGCAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	109701075	109698136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109698395_109699328_109699371_109700506_109700560_109700929
ES.26645.16	chr5	-	585	4	Genic_Genomic	ENSMUSG00000106028.2	novel	489	6	NA	NA	924	1620	multi-exon	FALSE	canonical	3	14	junction_1	15.542057635833	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCCGGGACACGCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	109701098	109698137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109698443_109699328_109699371_109700490_109700560_109700929
ES.26645.2	chr5	-	4407	9	Fusion	ENSMUSG00000106028.2_ENSMUSG00000093688.2	novel	489	6	NA	NA	901	584	intron_retention	FALSE	canonical	0	0	junction_1	16.1743431087633	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGGTTTCTTGTGATT	NA	False	NA	NA	False	NA	NA	NA	109701121	109674741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_109675524_109675976_109676993_109694183_109694258_109696620_109696818_109697186_109698443_109699328_109699436_109699526_109700241_109700490_109700560_109700929
ES.26645.3	chr5	-	2303	5	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	1460	3843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.53834841531101	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATGCATTTTATTTAGA	NA	False	NA	-2	True	AATAAA	-19	NA	109700562	109695914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109697114_109697551_109698443_109699328_109699371_109699667_109699783_109700506
ES.26645.4	chr5	-	3508	5	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	954	3842	intron_retention	FALSE	canonical	1	5	junction_2	24.2590189414164	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATGCATTTTATTTAG	NA	False	NA	-3	True	AATAAA	-18	NA	109701068	109695915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109698395_109699328_109699436_109699526_109700241_109700490_109700560_109700929
ES.26645.5	chr5	-	2307	4	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2128	3839	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.9977776790036	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTACATGCATTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	109699894	109695918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109697114_109697551_109698395_109699328_109699371_109699667
ES.26645.6	chr5	-	2339	4	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2237	3839	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.4585817704589	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTACATGCATTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	109699785	109695918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109697114_109697551_109698395_109699328_109699371_109699526
ES.26645.7	chr5	-	1662	3	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	2261	3839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTACATGCATTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	109699761	109695918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109696949_109697186_109697386_109699328
ES.26645.8	chr5	-	2355	5	Genic_Genomic	ENSMUSG00000106028.2	novel	489	6	NA	NA	887	3839	multi-exon	FALSE	canonical	1	2	junction_1	22.4318412084251	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTACATGCATTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	109701135	109695918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109697114_109697551_109698395_109699328_109699371_109700490_109700560_109700929
ES.26645.9	chr5	-	3117	6	NNC	ENSMUSG00000106028.2	novel	489	6	NA	NA	935	3838	intron_retention	FALSE	canonical	1	1	junction_4	19.1562000407179	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTACATGCATTTTAT	NA	False	NA	-7	True	AATAAA	-14	NA	109701087	109695919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109697114_109697551_109698443_109699328_109699436_109699526_109700241_109700506_109700560_109700929
ES.26646.10	chr5	-	1131	7	NNC	ENSMUSG00000033467.13	novel	1405	8	NA	NA	-843	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	253.894991417055	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCGGCCAGCCATCATT	NA	False	NA	-10	True	NA	NA	NA	109705182	109702577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109702937_109703138_109703224_109703372_109703527_109703884_109704048_109704285_109704429_109704866_109705034_109705122
ES.26646.2	chr5	-	833	4	NIC	ENSMUSG00000033467.13	novel	812	5	NA	NA	-171	2	combination_of_known_splicesites	FALSE	canonical	1	50	junction_3	264.478102433201	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	-9	True	NA	NA	NA	109704510	109702576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_109702937_109703138_109703224_109703884_109704048_109704285
ES.26646.5	chr5	-	1367	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	-42	-2	-42	2	multi-exon	FALSE	canonical	1	25	junction_7	229.794229159703	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	-9	True	NA	NA	NA	109706901	109702576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
ES.26646.8	chr5	-	1246	4	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2238	2	-225	2	intron_retention	FALSE	canonical	3	140	junction_3	204.613999738261	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCGGCCAGCCATCATTA	NA	False	NA	-9	True	NA	NA	NA	109704564	109702576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884
ES.26647.1	chr5	-	994	6	NNC	ENSMUSG00000072763.3	novel	3341	4	NA	NA	218	95638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.931933814205	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCACCTAGAGTCATA	6349	False	NA	NA	False	NA	NA	NA	109838689	109726772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109727284_109761810_109761934_109825173_109825258_109826379_109826441_109826628_109826756_109838601
ES.26647.2	chr5	-	565	5	NNC	ENSMUSG00000072763.3	novel	3341	4	NA	NA	251	33609	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.5605205732341	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGTGATTAAAATAATC	6382	False	NA	NA	False	AATAAA	-15	NA	109838656	109788801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109789040_109825173_109825258_109826379_109826441_109826628_109826756_109838601
ES.26647.3	chr5	-	4589	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	233	-1481	233	1481	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGCTCAGCAATTAAT	6364	False	NA	NA	False	ATTAAA	-22	NA	109838674	109820929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ES.26647.4	chr5	-	3310	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	33	-2	33	2	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCATGGTATCTT	6164	False	NA	-1	True	NA	NA	NA	109838874	109822408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ES.26647.5	chr5	-	4247	3	NIC	ENSMUSG00000072763.3	novel	3341	4	NA	NA	218	2	intron_retention	FALSE	canonical	3	55	junction_1	18.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCATGGTATCTT	6349	False	NA	-1	True	NA	NA	NA	109838689	109822408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_109826441_109826628_109826756_109838601
ES.26647.6	chr5	-	474	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	209	2658	209	-2658	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCCTACAAATGCA	6340	False	NA	NA	False	NA	NA	NA	109838698	109825068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ES.26648.1	chr5	+	2649	2	Intergenic	novelGene_22182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAGAAAATAACACT	NA	False	NA	NA	False	NA	NA	NA	109851453	109867299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109851643_109864839
ES.26649.1	chr5	+	160	1	Intergenic	novelGene_22184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	6571	False	NA	NA	False	NA	NA	NA	109873295	109873455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109873300_109873500
ES.2665.1	chr10	-	2667	1	Intergenic	novelGene_2031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACACTTGTTTTGTATGT	NA	False	NA	NA	False	ATTAAA	-39	NA	41349026	41346359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41346400_41349000
ES.2665.2	chr10	-	3394	1	Intergenic	novelGene_2032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	41352267	41348873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41348900_41352300
ES.2665.3	chr10	-	917	2	Antisense	novelGene_ENSMUSG00000019823.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	41352600	41348878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_41349123_41351927
ES.26650.1	chr5	-	5280	2	Intergenic	novelGene_22183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTTGGTACCTAA	NA	False	NA	NA	False	NA	NA	NA	109880694	109870327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109873020_109878106
ES.26651.1	chr5	+	172	1	Intergenic	novelGene_22187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	109913624	109913796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109913600_109913800
ES.26652.1	chr5	-	2041	1	Intergenic	novelGene_22185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGTCGTGTAGTTCT	NA	False	NA	NA	False	NA	NA	NA	109883853	109881812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109881800_109883900
ES.26652.10	chr5	-	4481	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	5	-10359	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGTTGAATGCACTGA	NA	False	NA	NA	False	AATAAA	-20	NA	109944159	109927631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
ES.26652.11	chr5	-	3165	3	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	3	-12825	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	53.5	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTGGTCTTGGTATTT	NA	False	NA	-2	True	NA	NA	NA	109944161	109930097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109933023_109933207_109933335_109944048
ES.26652.12	chr5	-	2023	4	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	-5	-12827	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	67.6214955961983	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCTTGGTCTTGGTAT	NA	False	NA	-4	True	NA	NA	NA	109944169	109930099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109931814_109932961_109933023_109933207_109933335_109944048
ES.26652.13	chr5	-	1674	5	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	5	-12830	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.4350534318922	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGTCTTGGTCTTGG	NA	False	NA	-7	True	NA	NA	NA	109944159	109930102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109931071_109931406_109931814_109932961_109933023_109933207_109933335_109944048
ES.26652.3	chr5	-	4017	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	-102	-3316	-102	475	multi-exon	FALSE	canonical	3	125	junction_2	15.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCCATATGCCTTTTT	7555	False	NA	NA	False	NA	NA	NA	109899854	109883380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109886877_109887064_109887192_109899460
ES.26652.4	chr5	-	2853	5	Fusion	ENSMUSG00000105471.2_ENSMUSG00000072762.10	novel	2001	4	NA	NA	11	473	multi-exon	FALSE	canonical	1	1	junction_4	58.1264784758203	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATAGCCATATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	109944153	109883382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460_109899738_109944048
ES.26652.5	chr5	-	3358	5	Fusion	ENSMUSG00000105471.2_ENSMUSG00000072762.10	novel	2001	4	NA	NA	-2	472	multi-exon	FALSE	non_canonical	0	0	junction_3	64.8127109446905	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATAGCCATATGCCTT	NA	False	NA	NA	False	NA	NA	NA	109944166	109883383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_109885666_109886815_109886877_109887064_109887192_109910795_109911566_109944048
ES.26652.7	chr5	-	462	3	FSM	ENSMUSG00000072762.10	ENSMUST00000100937.4	599	3	168	-31	-121	31	multi-exon	FALSE	canonical	3	125	junction_2	15.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATGTCAGGTGTCTG	7825	False	NA	NA	False	NA	NA	NA	109899584	109886665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_109886877_109887064_109887192_109899460
ES.26652.8	chr5	-	787	1	Intergenic	novelGene_22186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCTCTAATTGGGGA	29	False	NA	NA	False	AAAAAG	-20	NA	109907380	109906593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109906600_109907400
ES.26652.9	chr5	-	5957	3	NNC	ENSMUSG00000105471.2	novel	665	2	NA	NA	4	5448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATGAATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	109944160	109911824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_109917111_109917262_109917822_109944048
ES.26653.1	chr5	+	120	1	Intergenic	novelGene_22188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	109953411	109953531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_109953400_109953500
ES.26654.1	chr5	-	1107	5	Intergenic	novelGene_22190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	117.134538032128	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTTGGTCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	109992890	109955800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109956511_109977165_109977284_109984614_109984676_109984863_109984991_109992799
ES.26654.10	chr5	-	4139	6	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-13206	1496	multi-exon	FALSE	canonical	0	0	junction_3	100.191017561456	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGTGCTCAACAATTAA	NA	False	NA	-2	True	NA	NA	NA	109995217	109979870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109993337_109993421_109994552_109994621_109995014
ES.26654.11	chr5	-	4190	7	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-18010	1496	multi-exon	TRUE	canonical	0	0	junction_3	95.3583883159852	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGTGCTCAACAATTAA	NA	False	NA	-2	True	NA	NA	NA	110000021	109979870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109993337_109993421_109994552_109994621_109995558_109995686_109999894
ES.26654.12	chr5	-	3481	5	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-11079	1495	multi-exon	TRUE	non_canonical	0	0	junction_1	98.0267820547018	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGTGCTCAACAATTA	NA	False	NA	-3	True	NA	NA	NA	109993090	109979871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109982033_109982626_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.13	chr5	-	3416	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10896	1019	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTACTGTGTAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	109992907	109980347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.14	chr5	-	2226	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	-184	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATAAGAGTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	109992920	109981550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.15	chr5	-	783	4	Intergenic	novelGene_22193	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	95	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTTGCTTGTCATGG	NA	False	NA	NA	False	NA	NA	NA	109992922	109982995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.16	chr5	-	717	4	Intergenic	novelGene_22194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	94	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTAATCAATGTAGT	NA	False	NA	NA	False	NA	NA	NA	109992960	109983099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.17	chr5	-	8159	2	Intergenic	novelGene_22195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	255	junction_1	0	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTTAAGTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	109992854	109984507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109984676_109984863
ES.26654.18	chr5	-	336	3	Intergenic	novelGene_22196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	209	junction_2	23	89	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109992860	109984527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109984676_109984863_109984991_109992799
ES.26654.19	chr5	-	171	1	Intergenic	novelGene_22197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	109997479	109997308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109997300_109997500
ES.26654.2	chr5	-	1109	5	Intergenic	novelGene_22192	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	117.134538032128	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTTGGTCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	109992899	109955800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109956511_109977165_109977277_109984614_109984676_109984863_109984991_109992799
ES.26654.3	chr5	-	1308	6	Intergenic	novelGene_22189	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	104.795801442615	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTTGGTCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	109992885	109955800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109956511_109977165_109977284_109983261_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.4	chr5	-	1198	5	Intergenic	novelGene_22191	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	98.0267820547018	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCTTGGTCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	109992893	109955800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_109956511_109983261_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.5	chr5	-	4614	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10858	2255	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTTTATTTTAACTC	NA	False	NA	NA	False	ATTAAA	-21	NA	109992869	109979111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.6	chr5	-	4339	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	1929	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCCCCCCCAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	109992920	109979437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.7	chr5	-	3927	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10927	1499	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCTCAACAATTAATTT	NA	False	NA	1	True	NA	NA	NA	109992938	109979867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
ES.26654.8	chr5	-	5055	3	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10909	1498	multi-exon	FALSE	canonical	3	209	junction_2	23	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGCTCAACAATTAATT	NA	False	NA	0	True	NA	NA	NA	109992920	109979868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109984676_109984863_109984991_109992799
ES.26654.9	chr5	-	4141	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10926	1497	multi-exon	TRUE	non_canonical	0	0	junction_1	110.96646139963	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTGCTCAACAATTAAT	NA	False	NA	-1	True	NA	NA	NA	109992937	109979869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_109982263_109983192_109984676_109984863_109984991_109992799
ES.26655.1	chr5	+	3402	4	Intergenic	novelGene_22198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACAGTGTAAGTAGCAT	NA	False	NA	NA	False	AAAACA	-10	NA	110014576	110032740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.10	chr5	+	764	2	Intergenic	novelGene_22203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAGACTGACTGTTT	NA	False	NA	NA	False	AGTAAA	-10	NA	110014582	110018019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110017351
ES.26655.11	chr5	+	5856	3	NNC	ENSMUSG00000097140.2	novel	551	2	NA	NA	-19513	-3741	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	7.5	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTGTGTGTGTGCAC	NA	False	NA	NA	False	NA	NA	NA	110014583	110035262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110014679_110027935_110028063_110029628
ES.26655.12	chr5	+	2456	4	Intergenic	novelGene_22205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCTTGAAGGCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	110014585	110031803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.13	chr5	+	4487	5	Intergenic	novelGene_22206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	9.67923034130297	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATTTATTTTTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	110014585	110033706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110017351_110017480_110027935_110028063_110028252_110028314_110029628
ES.26655.14	chr5	+	451	4	Intergenic	novelGene_22207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACACATAGTGGAGCG	NA	False	NA	NA	False	NA	NA	NA	110014588	110029801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.15	chr5	+	5852	2	Intergenic	novelGene_22208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110014594	110023119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110017351
ES.26655.16	chr5	+	3731	5	Intergenic	novelGene_22209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	9.67923034130297	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGCTCAGCAATTAGT	NA	False	NA	NA	False	ATTAAA	-22	NA	110014598	110032963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110017351_110017480_110027935_110028063_110028252_110028314_110029628
ES.26655.17	chr5	+	4145	5	Intergenic	novelGene_22210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	9.67923034130297	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGTGCCCAAAAAAGGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	110014599	110033378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110017351_110017480_110027935_110028063_110028252_110028314_110029628
ES.26655.19	chr5	+	3766	1	Intergenic	novelGene_22211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGAATTCTTGTTTTCCC	NA	False	NA	NA	False	AATAAA	-33	NA	110029627	110033393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110029600_110033400
ES.26655.2	chr5	+	637	6	NNC	ENSMUSG00000090015.9	novel	192	2	NA	NA	-56689	480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.3570632880022	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCAATCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	110014576	110090056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110014679_110076627_110076764_110077806_110077902_110088291_110088419_110088605_110088667_110089940
ES.26655.20	chr5	+	1539	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	-36	-830	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTACAAGTGTGATC	NA	False	NA	NA	False	NA	NA	NA	110071229	110090972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.21	chr5	+	2109	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	220	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110071485	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.22	chr5	+	2447	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	222	-252	222	252	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	110071487	110092054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ES.26655.23	chr5	+	2184	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	229	4	229	-4	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110071494	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ES.26655.24	chr5	+	460	3	ISM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	236	2995	236	137	5prime_fragment	FALSE	canonical	3	75	junction_1	62	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAATGCCAGGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	110071501	110088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110071633_110088291_110088419_110088605
ES.26655.25	chr5	+	3845	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	248	-1676	248	1676	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	12	True	ATTAAA	-24	NA	110071513	110093478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ES.26655.26	chr5	+	2354	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACCGCACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	110071513	110092071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.27	chr5	+	1575	8	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	-847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.9475820967744	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTCATACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	110071513	110090955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110077806_110077902_110080792_110080883_110088275_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.28	chr5	+	3991	7	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.2040945949256	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	NA	False	NA	11	True	ATTAAA	-23	NA	110071513	110093477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110077806_110077902_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.29	chr5	+	2265	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	82.8986580108508	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGCTAT	NA	False	NA	NA	False	NA	NA	NA	110071513	110091801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110075067_110075165_110088291_110088419_110088605_110088667_110089940
ES.26655.3	chr5	+	4055	4	Intergenic	novelGene_22199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGAATTCTTGTTTTCCC	NA	False	NA	NA	False	AATAAA	-33	NA	110014576	110033393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.30	chr5	+	3760	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	NA	False	NA	11	True	ATTAAA	-23	NA	110071513	110093477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.31	chr5	+	559	2	ISM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	248	3071	248	61	intron_retention	FALSE	canonical	3	75	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGCAACAGTGAA	NA	False	NA	NA	False	NA	NA	NA	110071513	110088731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110071633_110088291
ES.26655.32	chr5	+	3361	4	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	248	3	intron_retention	TRUE	canonical	0	0	junction_3	82.0582448968753	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGCTATCTTT	NA	False	NA	NA	False	NA	NA	NA	110071513	110091805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110090126_110090210
ES.26655.34	chr5	+	5025	4	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	253	1672	intron_retention	FALSE	canonical	0	0	junction_3	82.0582448968753	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGTGCTCAGCAATTA	NA	False	NA	8	True	ATTAAA	-20	NA	110071518	110093474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110090126_110090210
ES.26655.35	chr5	+	3892	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	253	1676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9714949216282	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	12	True	ATTAAA	-24	NA	110071518	110093478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.36	chr5	+	1348	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	254	-831	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	82.8989746619341	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCTTACAAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	110071519	110090971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110080792_110080893_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.37	chr5	+	4075	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	254	1860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9714949216282	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATAGATATAGTGTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	110071519	110093662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.38	chr5	+	3395	8	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	254	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.4407994265324	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110071519	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110077806_110077902_110080792_110081882_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.39	chr5	+	2531	7	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	259	252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.4498045331441	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	110071524	110092054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110080792_110080862_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.4	chr5	+	3987	3	Intergenic	novelGene_22201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_2	7.5	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGGAGAATTCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	110014577	110033387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110029628
ES.26655.40	chr5	+	4553	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	259	2479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGAACTCTTCTCTCCCC	NA	False	NA	NA	False	AATAAA	-25	NA	110071524	110094281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.41	chr5	+	4012	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	264	-1859	264	1859	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTATAGATATAGTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	110071529	110093661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ES.26655.42	chr5	+	3145	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	273	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	82.2595891066811	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110071538	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110080792_110081882_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.43	chr5	+	4068	8	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	273	1676	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	73.8431874077129	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	12	True	ATTAAA	-24	NA	110071538	110093478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110077806_110077902_110080792_110080893_110088291_110088419_110088605_110088667_110089940_110090119_110090201
ES.26655.44	chr5	+	3946	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	273	1885	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGTATTATTATTACT	NA	False	NA	NA	False	ATTAAA	-39	NA	110071538	110093687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090147_110090229
ES.26655.45	chr5	+	2457	6	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	281	269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9714949216282	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACCGCACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	110071546	110092071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.46	chr5	+	3276	7	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	281	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.8042244208539	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGCTAT	NA	False	NA	NA	False	NA	NA	NA	110071546	110091801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110076627_110076764_110080792_110081882_110088291_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.47	chr5	+	2039	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	292	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.5369804928106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGCTATCT	NA	False	NA	NA	False	NA	NA	NA	110071557	110091803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940_110090062_110090148
ES.26655.48	chr5	+	550	5	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	293	557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5115599212036	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	110071558	110090133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110071633_110077806_110077902_110088291_110088419_110088605_110088667_110089940
ES.26655.49	chr5	+	2305	1	NIC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	-1835	91	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTCTTTAAGTGTATTG	NA	False	NA	NA	False	NA	NA	NA	110086456	110088761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110086500_110088800
ES.26655.5	chr5	+	5927	4	NNC	ENSMUSG00000097140.2	novel	551	2	NA	NA	-19519	-3737	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTGTGTGCACAAGC	NA	False	NA	NA	False	NA	NA	NA	110014577	110035266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.50	chr5	+	3679	4	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	-1717	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.9471049658891	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110086574	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.51	chr5	+	3855	4	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	-1620	269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.9471049658891	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACCGCACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	110086671	110092071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110088419_110088605_110088667_110089940_110090072_110090155
ES.26655.52	chr5	+	3844	2	Fusion	ENSMUSG00000090015.9_ENSMUSG00000066613.15	novel	2417	4	NA	NA	2287	1862	multi-exon	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGTTACTGGGAAATT	NA	False	NA	NA	False	ATTAAA	-24	NA	110090578	110160139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110091115_110156831
ES.26655.53	chr5	+	3596	2	Fusion	ENSMUSG00000090015.9_ENSMUSG00000066613.15	novel	2417	4	NA	NA	2342	1669	multi-exon	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	110090633	110159946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110091115_110156831
ES.26655.54	chr5	+	433	2	NNC	ENSMUSG00000090015.9	novel	2417	4	NA	NA	2654	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	110090945	110091798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110090955_110091374
ES.26655.55	chr5	+	166	1	Intergenic	novelGene_22213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAATATATCTTTT	NA	False	NA	NA	False	NA	NA	NA	110130383	110130549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110130400_110130500
ES.26655.56	chr5	+	212	1	Intergenic	novelGene_22214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTTAAAATTAAAGACCA	NA	False	NA	NA	False	NA	NA	NA	110134920	110135132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110134900_110135100
ES.26655.57	chr5	+	2106	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-27	2	-27	-2	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGGTATCT	8343	False	NA	20	True	NA	NA	NA	110144359	110158275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.58	chr5	+	2570	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	-10	-2109	-9	-442	multi-exon	FALSE	canonical	3	208	junction_1	18.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCCTTACAAGTGTG	8361	False	NA	NA	False	NA	NA	NA	110144377	110157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121
ES.26655.59	chr5	+	3759	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	-1669	-9	1669	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	8361	False	NA	NA	False	ATTAAA	-24	NA	110144377	110159946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.6	chr5	+	3622	4	Intergenic	novelGene_22200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTATGCTCAGCAATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	110014577	110032961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.60	chr5	+	583	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	1507	-9	-199	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCTTACAAATGTG	8361	False	NA	NA	False	NA	NA	NA	110144377	110156770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.61	chr5	+	2087	6	NNC	ENSMUSG00000066613.15	novel	868	5	NA	NA	-9	7474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.862282345781	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACAATCTCCCAATTCA	8361	False	NA	NA	False	NA	NA	NA	110144377	110165751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497_110156536_110162910_110162991_110164092
ES.26655.62	chr5	+	1255	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	-9	835	-9	-442	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCCTTACAAGTGTG	8361	False	NA	NA	False	NA	NA	NA	110144377	110157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.63	chr5	+	3855	5	FSM	ENSMUSG00000066613.15	ENSMUST00000125213.8	868	5	-20	-2967	-9	1665	multi-exon	FALSE	canonical	3	13	junction_2	94.3514043350707	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGTGCTCAGCAATTA	8361	False	NA	NA	False	ATTAAA	-20	NA	110144377	110159942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110151218_110151319_110154809_110154937_110155121_110155183_110156497
ES.26655.64	chr5	+	455	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	-4	0	-3	0	multi-exon	FALSE	canonical	3	208	junction_1	18.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCAGGTGTCTGATT	8367	False	NA	NA	False	NA	NA	NA	110144383	110155333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121
ES.26655.65	chr5	+	4989	3	NIC	ENSMUSG00000066613.15	novel	868	5	NA	NA	-3	-693	intron_retention	FALSE	canonical	3	22	junction_1	111.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTACAAATGTGAGCC	8367	False	NA	NA	False	NA	NA	NA	110144383	110156276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110144500_110151218_110154937_110155121
ES.26655.66	chr5	+	453	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	0	1628	0	-320	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCATTCTACAAATACAT	8370	False	NA	NA	False	NA	NA	NA	110144386	110156649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.67	chr5	+	3934	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	1	-1854	0	1854	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAGATATAGTGTTACT	8371	False	NA	NA	False	ATTAAA	-16	NA	110144387	110160131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ES.26655.68	chr5	+	5046	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	12	-4607	2	1663	multi-exon	FALSE	canonical	3	208	junction_1	18.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGTGTGCTCAGCAAT	8383	False	NA	NA	False	ATTAAA	-18	NA	110144399	110159940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121
ES.26655.69	chr5	+	4027	3	NIC	ENSMUSG00000066613.15	novel	868	5	NA	NA	-3	2	intron_retention	FALSE	canonical	3	22	junction_1	111.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGGTGTCTGATTTG	8388	False	NA	NA	False	NA	NA	NA	110144404	110155335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110144500_110151218_110154937_110155121
ES.26655.7	chr5	+	4494	4	Intergenic	novelGene_22202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTAGAGGAAATTT	NA	False	NA	NA	False	AGTAAA	-19	NA	110014577	110033833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.70	chr5	+	3832	5	NNC	ENSMUSG00000066613.15	novel	868	5	NA	NA	2	1668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97.5563939472959	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	8393	False	NA	NA	False	ATTAAA	-23	NA	110144409	110159945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110144500_110151218_110151309_110154793_110154937_110155121_110155183_110156497
ES.26655.71	chr5	+	3657	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	23	-3229	3	285	multi-exon	FALSE	canonical	3	208	junction_1	18.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAGTAGATAGTTCTCT	8394	False	NA	NA	False	NA	NA	NA	110144410	110158562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110144500_110154809_110154937_110155121
ES.26655.72	chr5	+	8453	2	ISM	ENSMUSG00000066613.15	ENSMUST00000143639.8	749	4	3198	726	3177	-726	internal_fragment	FALSE	canonical	3	245	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110147605	110156243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110154937_110155121
ES.26655.73	chr5	+	4630	3	FSM	ENSMUSG00000066613.15	ENSMUST00000112536.8	2509	3	-1858	-263	-1858	256	multi-exon	FALSE	canonical	3	131	junction_2	57	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATACCGCACTG	NA	False	NA	NA	False	NA	NA	NA	110152403	110158533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110154937_110155121_110155183_110156497
ES.26655.74	chr5	+	4164	3	FSM	ENSMUSG00000066613.15	ENSMUST00000112536.8	2509	3	20	-1675	20	1668	multi-exon	FALSE	canonical	3	131	junction_2	57	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGCTCAGCAATTAATT	NA	False	NA	NA	False	ATTAAA	-23	NA	110154281	110159945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110154937_110155121_110155183_110156497
ES.26655.75	chr5	+	3259	1	Intergenic	novelGene_22215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGGAGTGAGTCATTCA	NA	False	NA	NA	False	AATAAA	-13	NA	110158318	110161577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110158300_110161600
ES.26655.8	chr5	+	11286	4	NNC	ENSMUSG00000097140.2	novel	551	2	NA	NA	-19514	1627	intron_retention	FALSE	canonical	3	21	junction_1	2.49443825784929	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	110014582	110040630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26655.9	chr5	+	650	4	Intergenic	novelGene_22204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGTAATCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	110014582	110029994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
ES.26656.1	chr5	-	175	1	Intergenic	novelGene_22212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	110064623	110064448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110064400_110064600
ES.26657.1	chr5	-	599	2	FSM	ENSMUSG00000097863.2	ENSMUST00000181488.2	589	2	-10	0	-10	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCCAACCGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	110144274	110143376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110143686_110143984
ES.26658.1	chr5	+	161	1	Intergenic	novelGene_22216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9059	False	NA	NA	False	NA	NA	NA	110190090	110190251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110190100_110190300
ES.26659.1	chr5	+	176	1	Intergenic	novelGene_22217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAACATTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	110192276	110192452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110192300_110192500
ES.2666.1	chr10	-	1742	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	-140	0	-111	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366476	41363167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ES.2666.10	chr10	-	1698	9	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	150	junction_8	18.8729303501073	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGTGGCTCTACCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	41366315	41363173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ES.2666.2	chr10	-	2394	7	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	152	junction_4	18.8325958557674	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTCTACCTTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	41366366	41363168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364820_41364926_41365021_41365270_41365348_41365459
ES.2666.3	chr10	-	2224	7	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	6	junction_4	66.5325734759549	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTCTACCTTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	41366380	41363168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364424_41365348_41365459_41365557_41365978
ES.2666.4	chr10	-	2500	7	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	152	junction_5	17.0782512765993	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTCTACCTTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	41366345	41363168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364820_41364926_41365348_41365459
ES.2666.5	chr10	-	1983	8	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-12	2	intron_retention	FALSE	canonical	3	150	junction_7	19.0777143199459	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGCTCTACCTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	41366348	41363171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364512_41364729_41364820_41364926_41365348_41365459_41365557_41365978
ES.2666.6	chr10	-	2301	8	NIC	ENSMUSG00000019822.13	novel	1602	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	152	junction_6	16.0572953729412	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGCTCTACCTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	41366367	41363171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365348_41365459
ES.2666.7	chr10	-	2828	4	NIC	ENSMUSG00000019822.13	novel	4150	6	NA	NA	-2	2	intron_retention	FALSE	canonical	3	172	junction_1	13.9522996909709	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGCTCTACCTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	41366367	41363171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41363579_41363667_41363822_41363988_41365348_41365459
ES.2666.8	chr10	-	2949	3	FSM	ENSMUSG00000019822.13	ENSMUST00000143470.2	2749	3	-204	4	5	2	multi-exon	FALSE	canonical	3	172	junction_1	10	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGGCTCTACCTTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	41366321	41363171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41363579_41363667_41365348_41365459
ES.2666.9	chr10	-	1499	6	NNC	ENSMUSG00000019822.13	novel	2365	7	NA	NA	365	0	intron_retention	FALSE	canonical	0	0	junction_4	74.5814990463453	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGTGGCTCTACCTTG	NA	False	NA	-6	True	AATAAA	-14	NA	41365310	41363173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364344_41364428_41364512_41364729
ES.26660.1	chr5	+	197	1	Intergenic	novelGene_22218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGACATGGTGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	110193490	110193687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110193500_110193700
ES.26661.1	chr5	-	1197	1	FSM	ENSMUSG00000090963.3	ENSMUST00000167969.2	255	1	-253	-689	-253	596	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	110194605	110193408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110193400_110194600
ES.26662.1	chr5	-	595	4	NNC	ENSMUSG00000090963.3	novel	1776	4	NA	NA	-11565	-1169	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.94422221866655	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTAATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	110205917	110195266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110195551_110196887_110196949_110197131_110197259_110205794
ES.26662.2	chr5	-	158	1	Intergenic	novelGene_22219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	110200943	110200785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110200800_110200900
ES.26663.1	chr5	-	176	1	Intergenic	novelGene_22220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAACAAACA	NA	False	NA	NA	False	NA	NA	NA	110210132	110209956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110210000_110210100
ES.26664.1	chr5	+	185	1	Intergenic	novelGene_22223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGGGAATTACATG	5913	False	NA	NA	False	NA	NA	NA	110237065	110237250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110237100_110237200
ES.26665.1	chr5	+	355	1	Intergenic	novelGene_22224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGAAAAAGCCCCTGAATT	7028	False	NA	NA	False	AATACA	-7	NA	110238180	110238535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110238200_110238500
ES.26666.1	chr5	+	177	1	Intergenic	novelGene_22225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	8626	False	NA	NA	False	NA	NA	NA	110239778	110239955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110239800_110240000
ES.26667.1	chr5	-	3881	6	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7713018685514	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTTCCTTTTTCTTCC	NA	False	NA	1	True	AATAAA	-18	NA	110242286	110223997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110234790_110235092_110235386_110235440_110242196
ES.26667.10	chr5	-	3766	6	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	25.8503384890798	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCAAAGTGTTCCTTTT	NA	False	NA	-5	True	AATAAA	-12	NA	110242326	110224003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110234052_110234201_110234818_110234876_110242196
ES.26667.11	chr5	-	3456	3	NIC	ENSMUSG00000109771.2	novel	512	6	NA	NA	-30	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCAAAGTGTTCCTTTT	NA	False	NA	-5	True	AATAAA	-12	NA	110242316	110224003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110227247_110240772_110240866_110242196
ES.26667.12	chr5	-	4539	4	NNC	ENSMUSG00000109771.2	novel	3523	4	NA	NA	-2156	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7124606795322	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTCAAAGTGTTCCTTT	-21	True	NA	-6	True	AATAAA	-11	NA	110230910	110224004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110229801
ES.26667.13	chr5	-	2722	1	Intergenic	novelGene_22221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110233420	110230698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110230700_110233400
ES.26667.14	chr5	-	1351	2	Intergenic	novelGene_22222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110234211	110230703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110231033_110233189
ES.26667.15	chr5	-	6838	4	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	-8	-7621	intron_retention	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACCAGAAATTAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	110242294	110234760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110238170_110238403_110239779_110239987_110240057_110240309
ES.26667.2	chr5	-	3553	6	NNC	ENSMUSG00000109771.2	novel	3523	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.9770272639518	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGTTCCTTTTTCT	NA	False	NA	-2	True	AATAAA	-15	NA	110242286	110224000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228644_110234818_110234876_110235032_110235092_110242196
ES.26667.3	chr5	-	3537	4	NNC	ENSMUSG00000109771.2	novel	3523	4	NA	NA	-5464	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	25.781130050226	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAAGTGTTCCTTTTTC	NA	False	NA	-3	True	AATAAA	-14	NA	110234218	110224001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110234114
ES.26667.4	chr5	-	3562	4	FSM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	-40	1	-40	-1	multi-exon	FALSE	canonical	3	35	junction_3	10.7082522694727	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAAAGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	110242326	110224002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110227247_110228349_110228411_110228603_110228731_110242196
ES.26667.5	chr5	-	4681	4	NNC	ENSMUSG00000109771.2	novel	3523	4	NA	NA	-2635	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.7124606795322	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAAAGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	110231389	110224002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110229417_110230826
ES.26667.6	chr5	-	3706	6	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	26.1793811997152	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAAAGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	110242326	110224002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110234790_110234876_110235032_110235092_110242196
ES.26667.7	chr5	-	3536	7	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	25.7902867159109	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAAAGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	110242268	110224002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110224757_110224871_110227247_110228349_110228411_110228603_110228731_110234790_110234879_110235032_110235092_110242196
ES.26667.8	chr5	-	3610	5	NNC	ENSMUSG00000109771.2	novel	512	6	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.976552682559	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAAAGTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	110242284	110224002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110240772_110240863_110242196
ES.26667.9	chr5	-	3598	5	NNC	ENSMUSG00000109771.2	novel	3523	4	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.7353564967173	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCAAAGTGTTCCTTTT	NA	False	NA	-5	True	AATAAA	-12	NA	110242304	110224003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110227247_110228349_110228411_110228603_110228731_110235032_110235092_110242196
ES.26668.1	chr5	+	3076	6	NNC	ENSMUSG00000064247.15	novel	3177	5	NA	NA	130	0	intron_retention	TRUE	canonical	0	0	junction_2	1.01980390271856	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTGGTCTCGTTTCT	NA	False	NA	NA	False	NA	NA	NA	110249199	110253819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110249287_110249665_110249795_110250041_110250198_110250311_110250496_110251260_110252587_110252625
ES.26669.1	chr5	-	1558	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	72.9845874140561	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255576	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255377
ES.26669.10	chr5	-	1706	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	150	junction_8	32.0497659897853	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256068	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.11	chr5	-	2545	6	NIC	ENSMUSG00000033434.16	novel	1481	7	NA	NA	-14	1	intron_retention	FALSE	canonical	3	206	junction_1	14.2772546380598	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256041	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
ES.26669.12	chr5	-	1702	10	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-80	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.9742242426263	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256143	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254918_110255064_110255721
ES.26669.13	chr5	-	1603	10	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.2456720787317	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256004	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255111_110255721
ES.26669.14	chr5	-	1722	8	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-7	1	intron_retention	FALSE	canonical	3	14	junction_3	78.0384520605067	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256034	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252287_110252375_110252525_110252755_110252965_110253113_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.17	chr5	-	1404	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	80.7902297588625	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256061	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110255721
ES.26669.18	chr5	-	1433	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	40	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255537	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255377
ES.26669.2	chr5	-	1820	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	150	junction_7	31.16185527997	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256063	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110255064_110255721
ES.26669.20	chr5	-	1469	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	72.9845874140561	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255320	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255210
ES.26669.21	chr5	-	1710	9	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.1887904750424	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256098	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253090_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.22	chr5	-	1702	8	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	14	junction_3	75.2001411201455	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110256025	110251843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253113_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.23	chr5	-	1837	7	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	150	junction_6	34.5434508988318	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110256011	110251843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252525_110252755_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.24	chr5	-	1868	7	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	150	junction_6	33.1448839692242	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110256013	110251843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110255064_110255721
ES.26669.25	chr5	-	1976	5	NIC	ENSMUSG00000033434.16	novel	1481	7	NA	NA	236	0	intron_retention	FALSE	canonical	3	206	junction_1	15.7698287879102	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110254554	110251843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110254203_110254518
ES.26669.26	chr5	-	2749	7	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	30	0	intron_retention	FALSE	canonical	3	179	junction_6	23.0193155608261	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255547	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110254203_110254518_110254807_110254925
ES.26669.28	chr5	-	2873	5	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	150	junction_4	38.5705522387222	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110256041	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252525_110252755_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.29	chr5	-	3309	2	ISM	ENSMUSG00000033434.16	ENSMUST00000135409.2	756	5	-779	-1253	2	0	intron_retention	FALSE	canonical	3	240	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110256061	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110253224_110254131
ES.26669.30	chr5	-	1664	9	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.7951821405484	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255981	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255111_110255721
ES.26669.31	chr5	-	1703	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	41	0	intron_retention	FALSE	canonical	2	8	junction_7	74.2529460694995	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255536	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254609_110254735_110254807_110254925
ES.26669.32	chr5	-	1559	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	81.8263467375158	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110256061	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110255721
ES.26669.33	chr5	-	1372	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255311	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255210
ES.26669.34	chr5	-	3549	11	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-1779	0	intron_retention	FALSE	non_canonical	0	0	junction_10	93.1104720211427	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110257842	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110256257_110256537_110257555_110257774
ES.26669.35	chr5	-	2343	3	ISM	ENSMUSG00000033434.16	ENSMUST00000138507.8	928	4	-1316	1	273	0	intron_retention	FALSE	canonical	3	206	junction_1	12	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110254517	110251844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110252035_110252133_110252525_110252755
ES.26669.36	chr5	-	1479	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	77.5474653035159	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCGGCCTGGTTTTGTA	NA	False	NA	-9	True	ATTAAA	-23	NA	110256001	110251845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254925_110255064_110255721
ES.26669.37	chr5	-	1758	9	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-109	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	73.2973396515863	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCGGCCTGGTTTTGTA	NA	False	NA	-9	True	ATTAAA	-23	NA	110256172	110251845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253113_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.39	chr5	-	3337	4	NIC	ENSMUSG00000033434.16	novel	1481	7	NA	NA	183	-6	intron_retention	FALSE	canonical	3	230	junction_2	6.94422221866655	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCACCGGCCTGGTT	NA	False	NA	-14	True	ATTAAA	-18	NA	110255823	110251850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252287_110252375_110252525_110252755_110254203_110254518
ES.26669.4	chr5	-	3394	3	ISM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	-356	-2	49	1	intron_retention	FALSE	canonical	3	206	junction_1	18.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255424	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110252035_110252133_110252287_110252375
ES.26669.40	chr5	-	2642	7	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	14	junction_4	81.5919726443723	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCACCGGCCTGGTT	NA	False	NA	-14	True	ATTAAA	-18	NA	110256034	110251850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253113_110254203_110254518_110255064_110255721
ES.26669.41	chr5	-	1494	9	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	75.2054477747457	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCACCGGCCTGGTT	NA	False	NA	-14	True	ATTAAA	-18	NA	110255541	110251850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255398
ES.26669.42	chr5	-	1294	10	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.2456720787317	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCACCGGCCTGGTT	NA	False	NA	-14	True	ATTAAA	-18	NA	110255564	110251850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255535
ES.26669.43	chr5	-	1773	8	NNC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	-12	-8	intron_retention	FALSE	canonical	3	14	junction_4	78.2640741727803	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCTCACCGGCCTGG	NA	False	NA	-16	True	ATTAAA	-16	NA	110256075	110251852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253113_110253224_110254131_110254203_110254518_110255064_110255721
ES.26669.5	chr5	-	2635	7	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	6	1	intron_retention	FALSE	canonical	3	150	junction_6	32.2305065978733	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256000	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.6	chr5	-	1738	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	-123	2	-123	1	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256186	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ES.26669.7	chr5	-	1753	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	150	junction_7	32.2332063536462	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256026	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.8	chr5	-	1691	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	53	1	intron_retention	FALSE	canonical	3	150	junction_7	34.1837770330445	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110255953	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
ES.26669.9	chr5	-	2008	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	9	1	intron_retention	FALSE	canonical	3	150	junction_7	31.7702209431334	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	False	NA	-6	True	ATTAAA	-26	NA	110256054	110251842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254807_110254925_110255064_110255721
ES.2667.1	chr10	+	3228	9	Fusion	ENSMUSG00000019818.16_ENSMUSG00000078451.6	novel	516	4	NA	NA	-616	0	multi-exon	FALSE	canonical	2	6	junction_4	822.135167946853	1088	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41377029	41407044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_41377355_41377620_41377684_41377779_41377928_41378991_41379049_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.10	chr10	+	3749	5	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	-7	intron_retention	FALSE	canonical	3	1648	junction_3	9.77241014284603	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395437	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41395697_41397913_41398004_41399168_41400142_41402822_41402880_41404667
ES.2667.11	chr10	+	2764	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATCAAAAGTGTCATAT	NA	False	NA	9	True	AATAAA	-14	NA	41395437	41407033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405742_41405860
ES.2667.12	chr10	+	2837	5	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_4	708.003663479222	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395437	41407044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41404667
ES.2667.13	chr10	+	4029	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	1284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTATGTCTGTAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	41395437	41408328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405776_41405924
ES.2667.14	chr10	+	5103	5	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	29	-7	intron_retention	FALSE	canonical	3	1648	junction_3	4.81534007106456	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395438	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.15	chr10	+	2877	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	798.164995473993	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395438	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399235_41400102_41400142_41402822_41402880_41404670
ES.2667.16	chr10	+	8902	4	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	29	-9	intron_retention	FALSE	canonical	0	0	junction_2	781.124118747391	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGTGTCATATTT	NA	False	NA	11	True	AATAAA	-16	NA	41395438	41407035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41399241_41400102_41401471_41401515_41402880_41404667
ES.2667.17	chr10	+	890	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	30	2002	30	0	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCGTGTGGCTGTCGTCT	NA	False	NA	4	True	TTTAAA	-13	NA	41395439	41405042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.18	chr10	+	2844	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395439	41407044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405882_41405929
ES.2667.19	chr10	+	4165	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	31	-1274	31	1274	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATCGTGTTTTCTGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	41395440	41408318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.2	chr10	+	874	6	NNC	ENSMUSG00000078451.6	novel	516	4	NA	NA	-613	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4.44522215417857	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAAGGCAATGGCAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	41377032	41390289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41377355_41377620_41377684_41377834_41377928_41378991_41379049_41383419_41383556_41390086
ES.2667.20	chr10	+	4656	5	ISM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	47	7	-40	-7	intron_retention	FALSE	canonical	3	1648	junction_4	9.35414346693485	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395456	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822
ES.2667.21	chr10	+	2781	5	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-40	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	716.218018483199	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395456	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395700_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.22	chr10	+	2782	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-39	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395457	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405340_41405424
ES.2667.24	chr10	+	5816	4	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-39	-11	intron_retention	FALSE	canonical	3	1648	junction_3	10.6144555520604	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATCAAAAGTGTCATAT	NA	False	NA	9	True	AATAAA	-14	NA	41395457	41407033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41395697_41397913_41399241_41400102_41400142_41402822
ES.2667.25	chr10	+	2773	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-39	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGTGTCATATTT	NA	False	NA	11	True	AATAAA	-16	NA	41395457	41407035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41406537_41406628
ES.2667.26	chr10	+	2880	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-39	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	663.257597016423	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAAAGTGTCATATTTT	NA	False	NA	12	True	AATAAA	-17	NA	41395457	41407036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400088_41400142_41402822_41402880_41404667
ES.2667.27	chr10	+	5546	5	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-39	-9	intron_retention	FALSE	canonical	3	1653	junction_4	7.88590514779375	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGTGTCATATTT	NA	False	NA	11	True	AATAAA	-16	NA	41395457	41407035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41402880_41404667
ES.2667.28	chr10	+	2774	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-36	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAAAGTGTCATATTTT	NA	False	NA	12	True	AATAAA	-17	NA	41395460	41407036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405877_41405965
ES.2667.29	chr10	+	2785	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCATATTTTGATTA	NA	False	NA	17	True	AATAAA	-22	NA	41395460	41407041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405851_41405933
ES.2667.3	chr10	+	933	6	NNC	ENSMUSG00000078451.6	novel	516	4	NA	NA	-613	11	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	2.1540659228538	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGCAATGGCAGACACA	NA	False	NA	NA	False	ATTAAA	-23	NA	41377032	41390293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41377355_41377620_41377684_41377779_41377928_41378991_41379049_41383419_41383556_41390086
ES.2667.30	chr10	+	10662	3	NNC	ENSMUSG00000019818.16	novel	1528	4	NA	NA	-27	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	830.5	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395469	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41399241_41400102_41401478_41401521
ES.2667.31	chr10	+	1441	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	89	1392	2	610	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAATAGAAGCTAAAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	41395498	41405652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.32	chr10	+	2386	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395498	41407044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405364_41405810
ES.2667.33	chr10	+	2556	2	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	12	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGTGTCATATTT	NA	False	NA	11	True	AATAAA	-16	NA	41395508	41407035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41395697_41404667
ES.2667.34	chr10	+	5452	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	13	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	664.537433106669	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	False	NA	13	True	AATAAA	-18	NA	41395509	41407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41401516_41401559_41402880_41404667
ES.2667.35	chr10	+	3259	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	661.914012542415	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41395517	41407038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41396148_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.36	chr10	+	7162	4	FSM	ENSMUSG00000019818.16	ENSMUST00000187279.7	1528	4	136	-5770	136	-6	multi-exon	FALSE	canonical	3	1657	junction_2	7.25718035235908	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41395632	41407038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102
ES.2667.37	chr10	+	6987	3	NNC	ENSMUSG00000019818.16	novel	1528	4	NA	NA	3106	-6	intron_retention	FALSE	canonical	0	0	junction_2	830.5	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41399145	41407038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41399241_41400102_41401516_41401559
ES.2667.38	chr10	+	5575	3	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	3598	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	826.5	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41399637	41407044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41401516_41401559_41402880_41404667
ES.2667.39	chr10	+	4344	3	NNC	ENSMUSG00000019818.16	novel	1528	4	NA	NA	4823	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	826.5	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGTCATATTTTGA	NA	False	NA	14	True	AATAAA	-19	NA	41400862	41407038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41401477_41401520_41402880_41404667
ES.2667.4	chr10	+	2492	3	NNC	ENSMUSG00000078451.6	novel	516	4	NA	NA	-597	5310	intron_retention	FALSE	canonical	1	2	junction_2	6.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATCTTGAAAACT	NA	False	NA	NA	False	NA	NA	NA	41377048	41379957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41377355_41377620_41377684_41377834
ES.2667.40	chr10	+	1484	2	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	9374	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGTGTCATATTT	NA	False	NA	11	True	AATAAA	-16	NA	41405413	41407035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41406176_41406313
ES.2667.5	chr10	+	3175	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	-231	-22	-231	22	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATTGTGTTTGCCTTA	NA	False	NA	42	True	NA	NA	NA	41395178	41407066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.7	chr10	+	3797	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	16	-891	16	891	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTGTTTGTTTGTT	NA	False	NA	NA	False	AGTAAA	-38	NA	41395425	41407935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.2667.8	chr10	+	2287	7	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	618.176192970544	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAAAGTGTCATATTTT	NA	False	NA	12	True	AATAAA	-17	NA	41395437	41407036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667_41405367_41405965
ES.2667.9	chr10	+	685	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	28	2209	28	-207	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGACCTGTTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	41395437	41404835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ES.26670.1	chr5	+	4915	5	NNC	ENSMUSG00000023284.16	novel	3158	5	NA	NA	-30	1739	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	22.410934831015	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCAAGATATGTTTC	1919	False	NA	16	True	AATAAA	-30	NA	110257927	110279399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258172_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.10	chr5	+	2848	6	NNC	ENSMUSG00000023284.16	novel	3158	5	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	21.235818797494	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGTATTTGTGAAGAT	2151	False	NA	NA	False	NA	NA	NA	110258159	110277658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112_110275211_110275316
ES.26670.11	chr5	+	3157	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-52	-2357	-37	-19	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2156	False	NA	NA	False	NA	NA	NA	110258164	110277641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.12	chr5	+	4711	5	NNC	ENSMUSG00000023284.16	novel	3158	5	NA	NA	-36	1727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.7631542519086	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTGAAACCTGAGAGTC	2157	False	NA	4	True	AATAAA	-18	NA	110258165	110279387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258184_110259762_110259933_110271625_110271781_110272218_110272312_110275112
ES.26670.14	chr5	+	3011	6	NNC	ENSMUSG00000023284.16	novel	937	6	NA	NA	-35	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3443783382638	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2158	False	NA	NA	False	NA	NA	NA	110258166	110277641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258184_110258327_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.15	chr5	+	3040	6	NNC	ENSMUSG00000023284.16	novel	937	6	NA	NA	-28	-19	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	25.3108672312902	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2165	False	NA	NA	False	NA	NA	NA	110258173	110277641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275114_110275211_110275316
ES.26670.16	chr5	+	3844	6	NNC	ENSMUSG00000023284.16	novel	937	6	NA	NA	-21	1732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.3443783382638	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCTGAGAGTCAAGAT	2172	False	NA	9	True	AATAAA	-23	NA	110258180	110279392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112_110277947_110278994
ES.26670.17	chr5	+	4022	6	NNC	ENSMUSG00000023284.16	novel	937	6	NA	NA	0	1733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	23.3443783382638	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGAGAGTCAAGATA	2193	False	NA	10	True	AATAAA	-24	NA	110258201	110279393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112_110278037_110278886
ES.26670.18	chr5	+	3121	5	NNC	ENSMUSG00000023284.16	novel	748	5	NA	NA	18	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.4693443182191	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCTATTTTAACCAGCA	2226	False	NA	NA	False	NA	NA	NA	110258234	110277641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258409_110259762_110259933_110271625_110271781_110272218_110272312_110275112
ES.26670.19	chr5	+	2904	4	FSM	ENSMUSG00000023284.16	ENSMUST00000086686.7	2085	4	-157	-662	-157	-30	multi-exon	FALSE	canonical	3	44	junction_2	8.80656320908194	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTGTCTAT	3752	False	NA	NA	False	NA	NA	NA	110259760	110277630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.2	chr5	+	3165	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	-14	7	-14	-7	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCAAGTGTATTTGTG	1935	False	NA	NA	False	NA	NA	NA	110257943	110277653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.20	chr5	+	4290	1	Genic_Genomic	ENSMUSG00000023284.16	novel	NA	NA	NA	NA	15187	1734	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGAGAGTCAAGATAT	NA	False	NA	11	True	AATAAA	-25	NA	110275104	110279394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_110275100_110279400
ES.26670.3	chr5	+	4716	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	179	-1737	-65	1737	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGTCAAGATATGTT	2128	False	NA	14	True	AATAAA	-28	NA	110258136	110279397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.4	chr5	+	3147	5	NNC	ENSMUSG00000023284.16	novel	3158	5	NA	NA	-54	191	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	22.410934831015	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTGGGTAATTGACATAA	2139	False	NA	NA	False	NA	NA	NA	110258147	110277851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258172_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.5	chr5	+	3401	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	192	-435	-52	435	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGAAATACTTAGCTC	2141	False	NA	NA	False	NA	NA	NA	110258149	110278095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.6	chr5	+	5183	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	199	-2224	-45	2224	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTGGCTTCATCATT	2148	False	NA	NA	False	NA	NA	NA	110258156	110279884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.7	chr5	+	3148	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	199	-189	-45	189	multi-exon	FALSE	canonical	3	28	junction_1	12.7744862910412	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACCTGGGTAATTGACAT	2148	False	NA	NA	False	NA	NA	NA	110258156	110277849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26670.8	chr5	+	3842	6	NNC	ENSMUSG00000023284.16	novel	3158	5	NA	NA	-44	1734	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	21.5740584962589	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGAGAGTCAAGATAT	2149	False	NA	11	True	AATAAA	-25	NA	110258157	110279394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112_110278037_110278886
ES.26670.9	chr5	+	4914	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-58	-4108	-43	1732	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACCTGAGAGTCAAGAT	2150	False	NA	9	True	AATAAA	-23	NA	110258158	110279392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ES.26671.1	chr5	-	209	1	Intergenic	novelGene_22226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGGTCCAAATTCT	9427	False	NA	NA	False	NA	NA	NA	110260428	110260219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110260200_110260400
ES.26672.1	chr5	-	247	1	Intergenic	novelGene_22227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTCAAATAGA	4031	False	NA	NA	False	AATATA	-33	NA	110265824	110265577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110265600_110265800
ES.26673.1	chr5	-	1620	1	Intergenic	novelGene_22228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGCCTGAGTAATTAAAAA	1318	False	NA	NA	False	NA	NA	NA	110268537	110266917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110266900_110268500
ES.26674.1	chr5	+	3247	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	-87	-1	-80	0	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283627	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.10	chr5	+	2926	17	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	104.971126982614	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283710	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.11	chr5	+	3254	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	109.818101568452	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283714	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318702
ES.26674.12	chr5	+	3232	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	-28	-3	1	0	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283715	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.13	chr5	+	4327	15	NIC	ENSMUSG00000014668.16	novel	2873	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	16	junction_2	104.683999713033	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283716	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.14	chr5	+	3215	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	109.098451969871	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTTGTGTTGTACTCC	NA	False	NA	17	True	AATAAA	-17	NA	110283723	110319833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311594_110311664_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.16	chr5	+	3049	17	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	81.0771237773023	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.17	chr5	+	3112	18	NNC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	84.5707255050868	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283725	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299425_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.20	chr5	+	3300	20	NNC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	131.457775785248	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110312512_110312594_110315989_110316098_110317007_110317081_110318727
ES.26674.22	chr5	+	4434	18	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	-8	intron_retention	FALSE	canonical	3	66	junction_2	88.7389156780121	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTCTTCTTGTGTTG	NA	False	NA	11	True	AATAAA	-11	NA	110283726	110319827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.23	chr5	+	2786	16	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	112.451471014537	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283726	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.24	chr5	+	3348	20	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.051644431649	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283726	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110286236_110286370_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.25	chr5	+	4421	16	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	248	junction_2	37.75335158043	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283726	110319835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.26	chr5	+	3110	18	NNC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.3964938021122	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283726	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292673_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.3	chr5	+	4655	17	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-28	0	intron_retention	FALSE	canonical	1	4	junction_8	116.786932060055	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283679	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294612_110299392_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.31	chr5	+	3191	19	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	99.2373542026177	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283730	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.32	chr5	+	3229	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.2373542026177	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283730	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288074_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.33	chr5	+	7298	17	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	9	0	intron_retention	FALSE	canonical	3	273	junction_10	31.4438363395754	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283734	110319837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.34	chr5	+	2994	17	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	82.6627183196875	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283734	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.35	chr5	+	7692	16	NNC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	9	-1	intron_retention	FALSE	canonical	1	1	junction_2	146.333348519361	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283734	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110286241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110311960_110312512_110312594_110315989_110316098_110317007_110317081_110318727
ES.26674.36	chr5	+	3508	20	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.97815712511	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283734	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283885_110284061_110286236_110286503_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.37	chr5	+	3877	21	NNC	ENSMUSG00000014668.16	novel	2873	19	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	153.097444459403	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283735	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110284348_110284519_110286241_110286503_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292673_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311594_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.38	chr5	+	3195	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	120.23240098623	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283735	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288074_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299425_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.39	chr5	+	3193	19	NNC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.362190013075	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTCTTGTGTTGTACT	NA	False	NA	15	True	AATAAA	-15	NA	110283735	110319831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110286236_110286301_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.4	chr5	+	3433	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	106.762182350526	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283696	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110286241_110286503_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.40	chr5	+	3211	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.478947721507	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283735	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110312512_110312594_110315996_110316098_110317007_110317081_110318727
ES.26674.41	chr5	+	7077	16	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	10	junction_4	86.1620179274681	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTTGTGTTGTACTCC	NA	False	NA	17	True	AATAAA	-17	NA	110283735	110319833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.42	chr5	+	3484	19	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	120.631670800002	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283735	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311594_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.44	chr5	+	2873	16	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	113.918957548289	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283743	110319835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.47	chr5	+	2908	17	FSM	ENSMUSG00000014668.16	ENSMUST00000198633.5	2623	17	22	-307	1	-3	multi-exon	FALSE	canonical	3	10	junction_5	84.7737568104068	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283744	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.48	chr5	+	3096	18	NNC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.722470596099	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283744	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294521_110299418_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.5	chr5	+	3506	20	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	114.791898910166	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283701	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110286236_110286503_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.52	chr5	+	3777	17	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	1	1	intron_retention	FALSE	canonical	3	248	junction_2	37.3729096405404	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283744	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.53	chr5	+	3163	19	NNC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	120.219192814574	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	NA	False	NA	18	True	AATAAA	-18	NA	110283744	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299425_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.57	chr5	+	1095	8	ISM	ENSMUSG00000014668.16	ENSMUST00000197010.5	2135	16	29	16621	11	5233	5prime_fragment	FALSE	canonical	3	248	junction_2	41.954786158824	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCGTCTGCTCAGG	NA	False	NA	NA	False	AATAAA	-19	NA	110283754	110299646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392
ES.26674.58	chr5	+	3062	18	NNC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	104.220985606693	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283756	110319837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299425_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.59	chr5	+	3358	20	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	115.821359246115	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283759	110319838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110284348_110284519_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.60	chr5	+	3230	18	ISM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	89	-2	42	0	3prime_fragment	FALSE	canonical	3	66	junction_1	88.1332350933953	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283832	110319837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.61	chr5	+	3024	16	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	83.104325332012	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283863	110319835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.62	chr5	+	4092	17	NNC	ENSMUSG00000014668.16	novel	597	4	NA	NA	1515	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	137.735579440281	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110285305	110319835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110286503_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294612_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.63	chr5	+	4495	2	ISM	ENSMUSG00000014668.16	ENSMUST00000197005.2	613	4	-362	-963	-362	-1	intron_retention	FALSE	canonical	3	335	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGTGTTGTACTCCT	2506	False	NA	18	True	AATAAA	-18	NA	110311309	110319834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110311960_110315989
ES.26674.64	chr5	+	2785	2	NNC	ENSMUSG00000014668.16	novel	613	4	NA	NA	5996	730	intron_retention	TRUE	non_canonical	0	0	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	8864	False	NA	NA	False	NA	NA	NA	110317667	110320568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110320327_110320442
ES.26674.65	chr5	+	2680	1	Genic_Genomic	ENSMUSG00000014668.16	novel	NA	NA	NA	NA	6039	552	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	8907	False	NA	NA	False	NA	NA	NA	110317710	110320390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_110317700_110320400
ES.26674.8	chr5	+	3143	18	NIC	ENSMUSG00000014668.16	novel	3159	18	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	73.7381038437897	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGTTGTACTCCTGT	NA	False	NA	20	True	AATAAA	-20	NA	110283707	110319836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26674.9	chr5	+	3857	18	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	1	-3	intron_retention	FALSE	canonical	3	66	junction_2	103.097192696351	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTGTGTTGTACTC	NA	False	NA	16	True	AATAAA	-16	NA	110283708	110319832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ES.26675.1	chr5	+	5247	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	-171	3056	-171	213	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGCATAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	110324395	110371280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.10	chr5	+	5306	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-4	-497	-4	497	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCTATATTATTTAAGG	NA	False	NA	NA	False	TATAAA	-23	NA	110324740	110371564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.11	chr5	+	7954	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	178	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110324744	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.12	chr5	+	4856	24	NIC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	0	44	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	28.0402761906312	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGTAATGGTACATA	NA	False	NA	124	True	ATTAAA	-15	NA	110324744	110371111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.15	chr5	+	7819	23	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.1526142905231	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTCATAATTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	110324745	110374333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110333632_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.16	chr5	+	4490	24	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	1	-46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	29.2795017879871	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGTGGCTTTCTTTT	NA	False	NA	34	True	NA	NA	NA	110324745	110371021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369506_110370773
ES.26675.17	chr5	+	4871	25	NNC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.8167460233617	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTCTGGTGGCTTTCT	NA	False	NA	31	True	NA	NA	NA	110324745	110371018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110353921_110354034_110355421_110355643_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.19	chr5	+	4755	24	NNC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.408244496757	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGTGGCTTTCTTTT	NA	False	NA	34	True	NA	NA	NA	110324745	110371021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349853_110350431_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.2	chr5	+	5061	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	-171	3242	-171	27	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAACAGAAAAAAACTG	NA	False	NA	107	True	AAGAAA	-38	NA	110324395	110371094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.20	chr5	+	4975	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	44	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGTAATGGTACATA	NA	False	NA	124	True	ATTAAA	-15	NA	110324745	110371111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.21	chr5	+	4724	25	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	1	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	35.2354924835109	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110324745	110371019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110369738_110369827_110370773
ES.26675.22	chr5	+	8197	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTCATAATTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	110324745	110374333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.23	chr5	+	6059	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	8	-1262	8	1262	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAATCCCAGCACTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	110324752	110372329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.24	chr5	+	4727	25	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	4	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	35.5808693526295	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110324766	110371019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110353921_110354034_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.25	chr5	+	8053	24	NIC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	28.0402761906312	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110324772	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.26	chr5	+	5570	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	10	666	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGATTAGTTGTAGTCT	NA	False	NA	NA	False	NA	NA	NA	110324772	110371733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.27	chr5	+	4566	23	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	20	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	34.5415368591938	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110324782	110371019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110370769
ES.26675.28	chr5	+	4055	17	NIC	ENSMUSG00000029502.15	novel	711	3	NA	NA	37	-12918	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	27.9664279762361	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATCTTACTGTAGAT	NA	False	NA	NA	False	TTTAAA	-20	NA	110324799	110358149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640
ES.26675.29	chr5	+	8017	24	NNC	ENSMUSG00000029502.15	novel	711	3	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	39.6560352810956	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110324822	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357637_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368821_110369489_110369654_110370773
ES.26675.3	chr5	+	5165	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-316	-44	-138	44	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGTAATGGTACATA	NA	False	NA	124	True	ATTAAA	-15	NA	110324428	110371111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.31	chr5	+	4714	23	ISM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	4723	48	4705	-48	3prime_fragment	FALSE	canonical	3	55	junction_2	18.7931322078524	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	1820	False	NA	32	True	NA	NA	NA	110329467	110371019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.32	chr5	+	2222	8	ISM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	4723	29325	4705	5463	internal_fragment	FALSE	canonical	3	55	junction_2	21.1100130995039	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTATACTTTTGCATA	1820	False	NA	NA	False	AGTAAA	-18	NA	110329467	110341742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484
ES.26675.35	chr5	+	180	1	ISM	ENSMUSG00000029502.15	ENSMUST00000136900.2	3786	3	6690	2774	6650	-840	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	651	False	NA	NA	False	NA	NA	NA	110331412	110331592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110331400_110331600
ES.26675.37	chr5	+	5852	5	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	28216	0	intron_retention	TRUE	non_canonical	0	0	junction_1	55.5984487193663	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	8199	False	NA	NA	False	AATAAA	-15	NA	110352978	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110354179_110365319_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.38	chr5	+	198	1	FSM	ENSMUSG00000104720.2	ENSMUST00000199123.2	708	1	510	0	510	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	110354955	110355153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110355000_110355200
ES.26675.39	chr5	+	5237	10	ISM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	30579	0	30383	0	3prime_fragment	FALSE	canonical	3	105	junction_1	9.00617072407086	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110355145	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.40	chr5	+	2973	7	ISM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	33464	48	33446	-48	3prime_fragment	FALSE	canonical	3	114	junction_1	5.31245915016974	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTCTGGTGGCTTTCTT	NA	False	NA	32	True	NA	NA	NA	110358208	110371019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.41	chr5	+	5123	7	ISM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	34809	0	34613	0	3prime_fragment	FALSE	canonical	3	114	junction_1	5.31245915016974	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110359375	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.5	chr5	+	8284	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	-210	-3269	-32	0	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCATAATTCATTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	110324534	110374336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.6	chr5	+	5962	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	162	2008	6	1261	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTAATCCCAGCACTTG	NA	False	NA	NA	False	AATAAA	-19	NA	110324728	110372328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26675.7	chr5	+	4844	25	NNC	ENSMUSG00000029502.15	novel	8132	24	NA	NA	-11	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.6451453761783	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTCTGGTGGCTTTCT	NA	False	NA	31	True	NA	NA	NA	110324733	110371018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110324789_110326644_110326842_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ES.26676.1	chr5	-	178	2	Antisense	novelGene_ENSMUSG00000104720.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATAATCAGAT	NA	False	NA	NA	False	NA	NA	NA	110365320	110289191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_110289225_110365175
ES.26676.2	chr5	-	180	1	Intergenic	novelGene_22229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATAATCAGAT	NA	False	NA	NA	False	NA	NA	NA	110289371	110289191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110289200_110289400
ES.26676.3	chr5	-	2877	1	Genic_Genomic	ENSMUSG00000086247.8	novel	NA	NA	NA	NA	2080	-2487	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGGTGTTCATAGAAGT	NA	False	NA	NA	False	NA	NA	NA	110315682	110312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_110312800_110315700
ES.26676.4	chr5	-	3086	3	FSM	ENSMUSG00000086247.8	ENSMUST00000132210.2	686	3	-321	-2079	-321	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCCTGTATGTACCA	NA	False	NA	NA	False	AATAAA	-14	NA	110324691	110315384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110317877_110318128_110318214_110324182
ES.26676.5	chr5	-	181	1	Intergenic	novelGene_22230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	6084	False	NA	NA	False	NA	NA	NA	110336940	110336759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110336800_110336900
ES.26676.6	chr5	-	178	1	Intergenic	novelGene_22231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTACCTTA	NA	False	NA	NA	False	NA	NA	NA	110365322	110365144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110365100_110365300
ES.26677.10	chr5	+	5728	12	NIC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	2	-799	intron_retention	FALSE	canonical	3	178	junction_3	32.0598613650122	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGTCTGATATTTTG	NA	False	NA	6	True	AATACA	-16	NA	110378871	110402536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.100	chr5	+	5265	33	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	12585	23	12514	0	3prime_fragment	FALSE	canonical	3	140	junction_3	39.5237270509753	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	NA	False	NA	25	True	AGTAAA	-16	NA	110446756	110485317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.101	chr5	+	4857	30	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	13515	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	53.0299984651857	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	845	False	NA	27	True	AGTAAA	-18	NA	110447757	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454918_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.102	chr5	+	5054	29	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	15737	-327	-15001	327	3prime_fragment	FALSE	canonical	3	140	junction_2	38.1110755769586	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAACAAACA	1559	False	NA	NA	False	NA	NA	NA	110449908	110485667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.103	chr5	+	5163	28	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	16698	21	-14040	0	3prime_fragment	FALSE	canonical	3	140	junction_1	37.5639190044641	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	2520	False	NA	27	True	AGTAAA	-18	NA	110450869	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.105	chr5	+	4356	26	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	20019	21	-10719	0	3prime_fragment	FALSE	canonical	3	164	junction_1	34.0740370370169	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	5841	False	NA	27	True	AGTAAA	-18	NA	110454190	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.107	chr5	+	4232	25	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-7992	0	intron_retention	FALSE	canonical	0	0	junction_5	78.4728810198501	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	8568	False	NA	27	True	AGTAAA	-18	NA	110456917	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302_110461490_110462095_110462181_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.109	chr5	+	3332	14	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-4139	0	intron_retention	FALSE	canonical	3	184	junction_3	29.416012223752	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	4098	False	NA	27	True	AGTAAA	-18	NA	110471345	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110471545_110471795_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.110	chr5	+	3987	16	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-3966	0	intron_retention	FALSE	non_canonical	0	0	junction_9	65.1970006126731	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTTTGAAGCGTCTGT	4271	False	NA	10	True	AGTAAA	-1	NA	110471518	110485302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110478592_110478773_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.112	chr5	+	2362	12	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-2922	-2	intron_retention	FALSE	canonical	1	1	junction_1	73.4887409153424	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTTATGCTTCCAC	5315	False	NA	23	True	AGTAAA	-14	NA	110472562	110485315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110472770_110473031_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.12	chr5	+	3657	12	ISM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	4	802	4	-802	intron_retention	FALSE	canonical	3	178	junction_3	31.6695228521989	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAATGTCTGATATT	NA	False	NA	3	True	AATACA	-13	NA	110378873	110402533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648
ES.26677.14	chr5	+	2188	9	ISM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	6	4422	6	-2018	5prime_fragment	FALSE	canonical	3	178	junction_3	28.8606566106872	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAGTAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	110378875	110398913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566
ES.26677.15	chr5	+	4547	7	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.6599459633665	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTCTGGGAGATGTC	NA	False	NA	17	True	ATTAAA	-19	NA	110378875	110404515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110391468_110403122
ES.26677.18	chr5	+	3318	13	NNC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	14	-801	intron_retention	FALSE	canonical	1	2	junction_1	70.9371787804768	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAATGTCTGATATTT	NA	False	NA	4	True	AATACA	-14	NA	110378883	110402534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379346_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.2	chr5	+	3409	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	-81	749	-81	-749	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTTGAAAGTGTAGC	NA	False	NA	56	True	AATGAA	-16	NA	110378788	110402586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.20	chr5	+	5207	13	NNC	ENSMUSG00000029501.15	novel	5215	13	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_5	71.8947436650738	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	15	True	ATTAAA	-17	NA	110378892	110404513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110385977_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.21	chr5	+	5622	12	NIC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	-13	-804	intron_retention	FALSE	canonical	2	3	junction_8	74.2898055362347	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTGAATGTCTGATA	NA	False	NA	1	True	AATACA	-11	NA	110378893	110402531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110392437_110397196_110397367_110398566_110398674_110399441_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.22	chr5	+	5151	13	NIC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	-13	-1	intron_retention	FALSE	canonical	2	3	junction_9	71.1283561988857	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGATGTCTGGGAGAT	NA	False	NA	14	True	ATTAAA	-16	NA	110378893	110404512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399441_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.23	chr5	+	5132	13	NNC	ENSMUSG00000029501.15	novel	5215	13	NA	NA	-13	1	intron_retention	FALSE	non_canonical	0	0	junction_10	86.6136055517069	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTGGGAGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	110378893	110404514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399471_110400591_110401209_110401648_110401781_110402166
ES.26677.24	chr5	+	3326	18	Fusion	ENSMUSG00000029501.15_ENSMUSG00000007080.15	novel	1766	10	NA	NA	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	61.5505531107178	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTTCTGCCTCTCGT	NA	False	NA	45	True	AGTAAA	-36	NA	110378895	110485337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110379290_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.25	chr5	+	3330	14	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	-11	-802	intron_retention	FALSE	canonical	0	0	junction_10	89.745465181869	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAATGTCTGATATT	NA	False	NA	3	True	AATACA	-13	NA	110378895	110402533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110399657_110399739_110400577_110401209_110401648_110401781_110402166
ES.26677.26	chr5	+	5036	14	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	69.0858311885	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTGGGAGATGTCT	NA	False	NA	18	True	ATTAAA	-20	NA	110378899	110404516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166_110402602_110402793
ES.26677.27	chr5	+	6188	12	NNC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	-6	-802	intron_retention	FALSE	non_canonical	0	0	junction_8	75.0746185278849	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAATGTCTGATATT	NA	False	NA	3	True	AATACA	-13	NA	110378900	110402533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110392437_110397196_110397367_110398566_110398743_110398939_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.28	chr5	+	8165	12	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	4	3	intron_retention	FALSE	non_canonical	0	0	junction_8	75.0746185278849	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGAGATGTCTTACT	NA	False	NA	22	True	ATTAAA	-24	NA	110378910	110404520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110392437_110397196_110397367_110398566_110398743_110398939_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.29	chr5	+	3152	13	NIC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	8	-801	intron_retention	FALSE	canonical	2	3	junction_9	71.1283561988857	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAATGTCTGATATTT	NA	False	NA	4	True	AATACA	-14	NA	110378914	110402534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399441_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.3	chr5	+	5278	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	-17	-1184	-17	2	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGGGAGATGTCTTAC	NA	False	NA	21	True	ATTAAA	-23	NA	110378852	110404519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.31	chr5	+	5895	12	NNC	ENSMUSG00000029501.15	novel	5215	13	NA	NA	-57	0	intron_retention	FALSE	canonical	1	2	junction_1	89.3970620923518	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	15	True	ATTAAA	-17	NA	110378971	110404513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379346_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.32	chr5	+	4601	12	NIC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	-32	-801	intron_retention	FALSE	canonical	3	178	junction_2	32.5700770240933	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAATGTCTGATATTT	NA	False	NA	4	True	AATACA	-14	NA	110378996	110402534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110379290_110382212_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.33	chr5	+	4838	12	ISM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	3341	-1179	-3176	1	3prime_fragment	FALSE	canonical	3	178	junction_2	32.454418130639	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTGGGAGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	110382210	110404514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.34	chr5	+	6346	10	NIC	ENSMUSG00000029501.15	novel	4077	13	NA	NA	-3103	-867	intron_retention	FALSE	canonical	3	203	junction_2	29.2376385190877	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGAATAACTTAATCCT	NA	False	NA	-62	True	NA	NA	NA	110382283	110402468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110382687_110384138_110385718_110385812_110386002_110389794_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.36	chr5	+	4462	13	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	-2865	1	intron_retention	FALSE	canonical	0	0	junction_12	71.4345076898336	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATGTCTGGGAGATGT	NA	False	NA	16	True	ATTAAA	-18	NA	110382521	110404514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166_110403133_110403197
ES.26677.37	chr5	+	4159	10	ISM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	6608	1	128	-1	3prime_fragment	FALSE	canonical	3	203	junction_1	30.2156855676152	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGATGTCTGGGAGAT	NA	False	NA	14	True	ATTAAA	-16	NA	110385514	110404512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.38	chr5	+	4095	6	NNC	ENSMUSG00000029501.15	novel	5215	13	NA	NA	-1435	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	107.111904100338	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGATGTCTGGGAGAT	NA	False	NA	14	True	ATTAAA	-16	NA	110397170	110404512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110397367_110398566_110398743_110398939_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.39	chr5	+	165	1	Intergenic	novelGene_22232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTATTGGAT	NA	False	NA	NA	False	NA	NA	NA	110406128	110406293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110406100_110406300
ES.26677.4	chr5	+	3977	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	-47	1285	-10	-107	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	110378859	110403228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.40	chr5	+	4182	1	Antisense	novelGene_ENSMUSG00000029500.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAAAAAAAAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	110411459	110415641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_110411500_110415600
ES.26677.41	chr5	+	7258	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	-3	-92	-3	92	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACCAGAGTCTTGCTT	NA	False	NA	140	True	NA	NA	NA	110434168	110485432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.43	chr5	+	4398	33	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	14	1756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	59.6951156790696	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	110434185	110468799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110468615
ES.26677.45	chr5	+	6958	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	56.7207705570444	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434197	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.46	chr5	+	7193	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-9	1	intron_retention	FALSE	canonical	2	122	junction_13	49.4292641083625	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATGCTTCCACACAAA	NA	False	NA	28	True	AGTAAA	-19	NA	110434197	110485320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.47	chr5	+	7093	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	54.5277667225607	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434197	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437121_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.48	chr5	+	7123	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	56.6601558759671	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110434197	110485340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460881_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.49	chr5	+	7306	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_45	59.5528476789034	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	NA	False	NA	25	True	AGTAAA	-16	NA	110434200	110485317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437506_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483775_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.5	chr5	+	4079	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	0	-2	0	2	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAGCACTTGAGATCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	110378869	110403337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.50	chr5	+	6932	47	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	56.0231394604895	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTTCTGCCTCTCGT	NA	False	NA	45	True	AGTAAA	-36	NA	110434202	110485337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.51	chr5	+	7241	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-4	0	intron_retention	FALSE	canonical	2	122	junction_13	49.5657740527353	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434202	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.52	chr5	+	7391	50	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_30	61.7784058435585	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTATGCTTCCACA	NA	False	NA	24	True	AGTAAA	-15	NA	110434203	110485316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302_110461587_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.54	chr5	+	7204	47	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_11	61.5868644392258	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434206	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443093_110443504_110444871_110445009_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.56	chr5	+	747	6	NNC	ENSMUSG00000007080.15	novel	747	6	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	118.194077685813	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGTTCTGTTTTGT	NA	False	NA	7	True	AATAAA	-13	NA	110434224	110439099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438804
ES.26677.57	chr5	+	5588	30	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-18	-3764	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_29	60.2165533196477	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110434224	110463279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302
ES.26677.58	chr5	+	7252	47	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-18	-2	intron_retention	FALSE	canonical	2	122	junction_13	49.8173269862297	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTTATGCTTCCAC	NA	False	NA	23	True	AGTAAA	-14	NA	110434224	110485315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.6	chr5	+	5747	13	NNC	ENSMUSG00000029501.15	novel	5025	14	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_9	71.8793356180265	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	15	True	ATTAAA	-17	NA	110378869	110404513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398743_110398939_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.61	chr5	+	7202	48	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	0	intron_retention	TRUE	canonical	0	0	junction_19	56.6131152354216	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434225	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447600_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.63	chr5	+	7115	45	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	-3	intron_retention	FALSE	canonical	1	2	junction_9	57.1234707374378	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTTCTGCCTCTCGT	NA	False	NA	45	True	AGTAAA	-36	NA	110434225	110485337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.64	chr5	+	726	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	19	2	-17	-2	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGTTCTGTTTTGT	NA	False	NA	7	True	AATAAA	-13	NA	110434225	110439099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
ES.26677.65	chr5	+	7237	48	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	65.1527021994726	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434225	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437506_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466486_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.66	chr5	+	6913	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	56.515714997394	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTACTGCCTGCTCCAA	NA	False	NA	NA	False	NA	NA	NA	110434225	110485142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454630_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.67	chr5	+	5467	29	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	-3742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.3017286352709	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTACTGAAACTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110434225	110463301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302
ES.26677.68	chr5	+	7614	46	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	0	intron_retention	FALSE	canonical	2	122	junction_11	48.6138018302936	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110434225	110485340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.69	chr5	+	7119	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	61.6519936090652	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434225	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438135_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110481993_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.7	chr5	+	4573	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	1	-497	1	497	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGGTCTTTTCTTTTT	NA	False	NA	5	True	AATAAA	-18	NA	110378870	110403832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.70	chr5	+	6945	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-17	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	56.6160897682172	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGAAGCGTCTGTTTT	NA	False	NA	13	True	AGTAAA	-4	NA	110434225	110485305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.71	chr5	+	6974	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	55.4813824050172	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	NA	False	NA	25	True	AGTAAA	-16	NA	110434226	110485317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.72	chr5	+	4012	20	NIC	ENSMUSG00000007080.15	novel	4480	24	NA	NA	-16	-3505	intron_retention	FALSE	canonical	2	122	junction_11	58.4195353050943	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGTGAGGAAGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	110434226	110452528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440
ES.26677.73	chr5	+	7022	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	55.9229001036086	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110434226	110485340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.74	chr5	+	4089	21	NNC	ENSMUSG00000007080.15	novel	4480	24	NA	NA	-15	-3505	intron_retention	FALSE	canonical	2	3	junction_2	63.8516053048003	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGTGAGGAAGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	110434227	110452528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437506_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720
ES.26677.76	chr5	+	7122	46	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-8	-4	intron_retention	FALSE	canonical	0	0	junction_6	57.9706013189785	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACGGTTTTGAAGCGT	NA	False	NA	6	True	CATAAA	-45	NA	110434234	110485298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.77	chr5	+	4037	30	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-6	-5303	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_29	60.2165533196477	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGAGGAGGAAATTTT	NA	False	NA	NA	False	AATACA	-20	NA	110434236	110461740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302
ES.26677.79	chr5	+	7519	47	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_42	56.5141675530614	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434240	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482271_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.80	chr5	+	7074	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	69	20	-2	1	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATGCTTCCACACAAA	NA	False	NA	28	True	AGTAAA	-19	NA	110434240	110485320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.81	chr5	+	7044	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.1438413446585	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACGGTTTTGAAGCGT	NA	False	NA	6	True	CATAAA	-45	NA	110434242	110485298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437653_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.83	chr5	+	7039	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.5039598845859	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTATGCTTCCACACAAA	NA	False	NA	28	True	AGTAAA	-19	NA	110434242	110485320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446182_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.85	chr5	+	3611	22	NNC	ENSMUSG00000007080.15	novel	4480	24	NA	NA	2	-3535	intron_retention	FALSE	canonical	0	0	junction_9	78.9482163299337	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110434244	110452498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442777_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110452011
ES.26677.86	chr5	+	9377	47	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_14	63.5192095440144	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110434245	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110441268_110441580_110441662_110442374_110442483_110442757_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446839_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449853_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.87	chr5	+	5296	33	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	6	2918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	59.6951156790696	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTCCTGACATATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	110434248	110469961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110468816
ES.26677.88	chr5	+	7034	49	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	62.7269179271458	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTTATGCTTCCAC	NA	False	NA	23	True	AGTAAA	-14	NA	110434263	110485315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459901_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482271_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.89	chr5	+	6995	48	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	2855	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	54.407138441982	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCGTCTGTTTTATGCTT	NA	False	NA	19	True	AGTAAA	-10	NA	110437097	110485311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445009_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.9	chr5	+	3419	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	2	656	2	-656	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGGTGTTGCTAATTG	NA	False	NA	NA	False	AATAGA	-23	NA	110378871	110402679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ES.26677.90	chr5	+	7126	48	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	3447	0	intron_retention	FALSE	canonical	0	0	junction_7	73.1906914850128	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110437689	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442777_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302_110461490_110462095_110462181_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482483_110483775_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.91	chr5	+	3396	17	NNC	ENSMUSG00000007080.15	novel	4480	24	NA	NA	3842	-3505	intron_retention	FALSE	canonical	0	0	junction_3	64.9315745612256	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGTGAGGAAGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	110438084	110452528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110438137_110438270_110438364_110438824_110438980_110441580_110441662_110442374_110442483_110442757_110443504_110444853_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720
ES.26677.92	chr5	+	8400	41	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	5247	1	intron_retention	FALSE	non_canonical	0	0	junction_5	63.056120836918	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTGCCTCTCGTCTGA	NA	False	NA	49	True	AGTAAA	-40	NA	110439489	110485341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443275_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460671_110460769_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483775_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.93	chr5	+	6758	41	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	6921	0	intron_retention	FALSE	canonical	2	122	junction_6	41.1368447987932	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	NA	False	NA	25	True	AGTAAA	-16	NA	110441163	110485317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110441268_110441580_110441662_110442374_110442483_110442757_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.94	chr5	+	6686	43	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	6942	0	intron_retention	FALSE	canonical	2	4	junction_24	56.9947734008246	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110441184	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302_110461490_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.95	chr5	+	6055	40	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	7383	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	51.7367787949626	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110441625	110485340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.96	chr5	+	6282	40	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	8198	-2	intron_retention	FALSE	canonical	0	0	junction_35	52.0268857820787	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTTTATGCTTCCAC	NA	False	NA	23	True	AGTAAA	-14	NA	110442440	110485315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482271_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.97	chr5	+	6155	40	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	8582	21	8511	0	3prime_fragment	FALSE	canonical	2	122	junction_4	41.9940041429479	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGCTTCCACACAA	NA	False	NA	27	True	AGTAAA	-18	NA	110442753	110485319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.98	chr5	+	6316	39	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	8595	-1	intron_retention	FALSE	canonical	2	122	junction_3	41.2585926583063	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTCTGCCTCTCGTCT	NA	False	NA	47	True	AGTAAA	-38	NA	110442837	110485339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26677.99	chr5	+	6386	37	ISM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	10731	-562	10660	562	3prime_fragment	FALSE	canonical	2	122	junction_1	41.5060980199236	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGAGGATTTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	110444902	110485902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ES.26678.1	chr5	-	3700	7	NNC	ENSMUSG00000029500.17	novel	2044	6	NA	NA	6	2165	intron_retention	TRUE	non_canonical	0	0	junction_1	241.966538090612	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCGGTTGGCTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	110417747	110404830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110405839_110406366_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ES.26678.10	chr5	-	7143	4	NIC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	32	-7	intron_retention	FALSE	canonical	3	615	junction_1	51.2315007262784	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417688	110407027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110413695_110413776_110413903_110414952_110415132_110417517
ES.26678.12	chr5	-	1435	2	NNC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417719	110407027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110408267_110417523
ES.26678.13	chr5	-	5524	3	NIC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	13	-7	intron_retention	FALSE	canonical	3	583	junction_1	16	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417707	110407027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110408304_110413377_110413695_110413776
ES.26678.14	chr5	-	1328	2	NNC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	3840	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTGTTGTTTATT	NA	False	NA	-32	True	AATAAA	-6	NA	110410061	110407032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110408304_110410004
ES.26678.15	chr5	-	2361	8	Fusion	ENSMUSG00000029499.12_ENSMUSG00000029500.17	novel	2044	6	NA	NA	-2	-23	multi-exon	FALSE	canonical	0	0	junction_5	217.72909585922	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTTTACTTTGTTT	NA	False	NA	-43	True	NA	NA	NA	110434054	110407043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110429062_110429226_110431511_110431620_110433749
ES.26678.16	chr5	-	1746	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	50	302	-9	-277	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTATGTGGTTTTTGGT	NA	False	NA	NA	False	AAGAAA	-12	NA	110417729	110407297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ES.26678.17	chr5	-	1308	1	Intergenic	novelGene_22233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTCTCCACGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	110416777	110415469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110415500_110416800
ES.26678.18	chr5	-	813	1	NIC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	16	-3477	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAGAAATGACC	NA	False	NA	NA	False	NA	NA	NA	110417737	110416924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110416900_110417700
ES.26678.19	chr5	-	1091	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	-59	9	-59	4	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434111	110422156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ES.26678.2	chr5	-	2070	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	-7	-19	-7	-6	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGTAGTGTTTAGAAA	NA	False	NA	-1	True	AATAAA	-37	NA	110417760	110407001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ES.26678.20	chr5	-	1689	5	NNC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	218.810420227191	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434062	110422156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110422495_110425520_110425641_110429062_110429533_110431171_110431620_110433749
ES.26678.21	chr5	-	4074	4	NIC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-16	4	intron_retention	FALSE	canonical	3	476	junction_3	22.7596133534821	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434068	110422156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110425641_110429062_110429226_110431511_110431620_110433749
ES.26678.22	chr5	-	3326	4	NIC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-8	4	intron_retention	FALSE	canonical	3	476	junction_3	31.6789449880446	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGGGTGTGGTTTCTC	NA	False	NA	-5	True	AATAAA	-19	NA	110434060	110422156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110422495_110425520_110425641_110429062_110431620_110433749
ES.26678.23	chr5	-	1016	5	NNC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	204.212511859582	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAATGGGTGTGGTTTC	NA	False	NA	-7	True	AATAAA	-17	NA	110434016	110422158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110422495_110425520_110425641_110429062_110429248_110431511_110431620_110433749
ES.26678.25	chr5	-	163	1	Intergenic	novelGene_22234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	110429982	110429819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110429800_110430000
ES.26678.26	chr5	-	704	2	FSM	ENSMUSG00000029499.12	ENSMUST00000126882.2	466	2	-84	-154	-17	154	multi-exon	FALSE	canonical	3	476	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTTAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110434069	110431235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110431620_110433749
ES.26678.4	chr5	-	7102	5	NIC	ENSMUSG00000029500.17	novel	2044	6	NA	NA	-16	1	intron_retention	FALSE	canonical	3	390	junction_1	124.239687700831	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTTGTTTTAAAGGGA	NA	False	NA	-19	True	AATAAA	-19	NA	110417736	110407019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ES.26678.6	chr5	-	2519	9	Fusion	ENSMUSG00000029499.12_ENSMUSG00000029500.17	novel	2098	6	NA	NA	-19	-5	multi-exon	FALSE	canonical	0	0	junction_5	213.043422803897	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	-25	True	AATAAA	-13	NA	110434071	110407025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ES.26678.7	chr5	-	1441	2	NNC	ENSMUSG00000029500.17	novel	2098	6	NA	NA	-9	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	0	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTTTATTTGTTTTA	NA	False	NA	-25	True	AATAAA	-13	NA	110417729	110407025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110408269_110417531
ES.26678.9	chr5	-	4379	5	ISM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	73	32	14	-7	intron_retention	FALSE	canonical	3	275	junction_2	168.327619539991	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTTATTTGTTT	NA	False	NA	-27	True	AATAAA	-11	NA	110417706	110407027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952
ES.26679.1	chr5	-	3605	1	Antisense	novelGene_ENSMUSG00000007080.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAAAAAAAATGTAAAC	3234	False	NA	NA	False	NA	NA	NA	110445292	110441687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_110441700_110445300
ES.2668.1	chr10	-	2064	1	Antisense	novelGene_ENSMUSG00000019818.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41398590	41396526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_41396500_41398600
ES.26680.1	chr5	-	3395	2	Antisense	novelGene_ENSMUSG00000007080.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGATGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	110460661	110456642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_110459976_110460599
ES.26680.2	chr5	-	536	3	Antisense	novelGene_ENSMUSG00000007080.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGATGGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	110460661	110456642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_110457010_110459868_110459976_110460599
ES.26680.3	chr5	-	5317	1	Antisense	novelGene_ENSMUSG00000007080.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9324	False	NA	NA	False	NA	NA	NA	110461986	110456669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_110456700_110462000
ES.26681.1	chr5	-	175	1	Intergenic	novelGene_22235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	110501673	110501498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110501500_110501700
ES.26682.1	chr5	+	698	4	FSM	ENSMUSG00000072754.10	ENSMUST00000100924.5	692	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	17	junction_1	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTCCAGTCCATGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	110501954	110503959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110502160_110502356_110502483_110502590_110502717_110503718
ES.26682.2	chr5	+	664	4	FSM	ENSMUSG00000072754.10	ENSMUST00000190963.2	545	4	-61	-58	1	-5	multi-exon	FALSE	canonical	1	1	junction_1	12.2565175405668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCTTGTCCAGTCCAT	NA	False	NA	NA	False	AATAAA	-15	NA	110501962	110503955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110502160_110502378_110502483_110502590_110502717_110503718
ES.26682.3	chr5	+	860	3	NIC	ENSMUSG00000072754.10	novel	692	4	NA	NA	24	-5	intron_retention	FALSE	canonical	3	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCTTGTCCAGTCCAT	NA	False	NA	NA	False	AATAAA	-15	NA	110501985	110503955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110502483_110502590_110502717_110503718
ES.26683.1	chr5	+	3728	1	Intergenic	novelGene_22236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110558706	110562434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110558700_110562400
ES.26684.1	chr5	-	4683	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	70	-819	-29	3	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596398	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.10	chr5	-	4919	18	NIC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-26	0	intron_retention	FALSE	canonical	3	37	junction_10	69.7773522909372	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110596395	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.100	chr5	-	3809	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	75.3198944847264	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596394	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.101	chr5	-	3843	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.6075025869415	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596394	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519015_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524245_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580965_110595745
ES.26684.102	chr5	-	2989	13	NIC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	48.3415941216487	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTGGGTTTTCTGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	110534966	110510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110534766
ES.26684.103	chr5	-	5475	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	98	junction_7	68.0400535632424	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTGGGTTTTCTGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	110596352	110510439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.104	chr5	-	2913	12	NNC	ENSMUSG00000043323.18	novel	2700	12	NA	NA	-53	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	71.2104319593324	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTTTGGGTTTTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	110535015	110510441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110534766
ES.26684.105	chr5	-	3922	19	FSM	ENSMUSG00000043323.18	ENSMUST00000069483.12	4720	19	-24	822	-24	-6	multi-exon	FALSE	canonical	3	5	junction_10	76.4440608840507	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTTTGGGTTTTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	110596393	110510441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.106	chr5	-	3137	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	16231	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	44.3433071487557	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTTTGGGTTTTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	110564956	110510441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110564718
ES.26684.107	chr5	-	3971	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.5762381045574	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAACTTTGGGTTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	110596396	110510442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522260_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526196_110526364_110526759_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.108	chr5	-	3665	15	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	90.7795322161761	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAAACTTTGGGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	110596395	110510444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110543910_110543941_110580766_110580968_110595745
ES.26684.109	chr5	-	2923	5	ISM	ENSMUSG00000043323.18	ENSMUST00000198834.2	2571	14	10927	5653	10927	-5653	internal_fragment	FALSE	canonical	3	142	junction_4	11.1887220003001	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCAGTTCAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	110523901	110516418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872
ES.26684.11	chr5	-	3809	13	NIC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	48.3415941216487	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110534966	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110534766
ES.26684.111	chr5	-	4147	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-24	-6401	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	76.5536729605445	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATCTGTTTGTTGGA	NA	False	NA	NA	False	GATAAA	-16	NA	110596393	110517166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.113	chr5	-	6572	1	NIC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	9898	-7593	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGGACGTGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	110524930	110518358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110518400_110524900
ES.26684.114	chr5	-	2865	12	NIC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	-53	-7593	intron_retention	FALSE	canonical	2	10	junction_11	43.2906761858498	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGGACGTGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	110535015	110518358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110534766
ES.26684.115	chr5	-	3544	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	18	-7593	intron_retention	FALSE	canonical	0	0	junction_10	92.7009528897447	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGGACGTGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	110596334	110518358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110532240_110532280_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.116	chr5	-	3616	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4	-7593	intron_retention	FALSE	canonical	3	103	junction_8	65.6951207388257	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGGACGTGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	110596373	110518358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.117	chr5	-	2916	6	NIC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	9476	-7593	intron_retention	FALSE	canonical	3	146	junction_3	9.74474217206387	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTGGACGTGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	110525352	110518358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222
ES.26684.118	chr5	-	3518	2	Intergenic	novelGene_22237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGCATAGAGTGACTG	NA	False	NA	NA	False	NA	NA	NA	110574878	110570876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110572484_110572967
ES.26684.119	chr5	-	2624	1	Genic_Genomic	ENSMUSG00000043323.18	novel	NA	NA	NA	NA	3291	2468	mono-exon	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	110577896	110575272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_110575300_110577900
ES.26684.12	chr5	-	4669	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	84.385925218605	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110596395	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524245_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.120	chr5	-	3258	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4251	730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	299	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGGGGAGGGCAGCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	110585438	110577010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110585382
ES.26684.121	chr5	-	2833	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4441	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	249.876413897395	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110585628	110577740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110585382
ES.26684.122	chr5	-	3494	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	-398	-2120	-299	0	multi-exon	FALSE	canonical	3	401	junction_2	98.5	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110596767	110577740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110580012_110580766_110580968_110595745
ES.26684.123	chr5	-	7630	2	NNC	ENSMUSG00000043323.18	novel	2692	2	NA	NA	-4245	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110585432	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110582271_110582331
ES.26684.124	chr5	-	6963	2	FSM	ENSMUSG00000043323.18	ENSMUST00000198415.3	2692	2	-4272	1	-4272	-1	multi-exon	FALSE	canonical	3	598	junction_1	0	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110585459	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110580012_110580766
ES.26684.125	chr5	-	2723	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4447	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	299	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110585634	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110585382
ES.26684.126	chr5	-	3900	2	ISM	ENSMUSG00000043323.18	ENSMUST00000196801.5	4469	17	-67	67085	49	-1	5prime_fragment	FALSE	canonical	3	401	junction_1	0	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110596419	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110580968_110595745
ES.26684.129	chr5	-	3637	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-265	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	174.667302797824	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110596733	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110595745
ES.26684.13	chr5	-	6072	14	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_7	92.6381265203863	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110596374	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.130	chr5	-	3214	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	246.066386706244	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTCTTATTATTTAA	NA	False	NA	-2	True	AATAAA	-27	NA	110596373	110577741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110595745
ES.26684.131	chr5	-	2630	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4252	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.522013940528	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGTCTTATTATTTA	NA	False	NA	-3	True	AATAAA	-26	NA	110585439	110577742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580345_110580449_110580766_110580968_110585382
ES.26684.132	chr5	-	2533	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-2462	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	295.5	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGTCTTATTATTTA	NA	False	NA	-3	True	AATAAA	-26	NA	110583649	110577742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110583586
ES.26684.133	chr5	-	3740	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	78.7950929098168	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGTCTTATTATTTA	NA	False	NA	-3	True	AATAAA	-26	NA	110596404	110577742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580968_110584479_110584595_110595745
ES.26684.134	chr5	-	3623	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4445	-2	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_2	206	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGTCTTATTATTTA	NA	False	NA	-3	True	AATAAA	-26	NA	110585632	110577742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479
ES.26684.135	chr5	-	3434	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	180.98680123761	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110596451	110577743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580530_110580766_110580968_110595745
ES.26684.136	chr5	-	3864	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4250	-3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	76.5	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110585437	110577743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580449_110580766_110580968_110584479
ES.26684.137	chr5	-	3345	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4304	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	247.446065952877	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTAGTGTCTTATTATTT	NA	False	NA	-4	True	AATAAA	-25	NA	110585491	110577743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110584730
ES.26684.138	chr5	-	2705	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4250	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.94392028877595	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTACTAGTGTCTTATTA	NA	False	NA	-7	True	AATAAA	-22	NA	110585437	110577746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580345_110580530_110580766_110580968_110585382
ES.26684.139	chr5	-	3291	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	186.206575847602	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTACTAGTGTCTTATT	NA	False	NA	-8	True	AATAAA	-21	NA	110596387	110577747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580345_110580530_110580766_110580968_110595745
ES.26684.14	chr5	-	4529	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	85.2177358300489	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110596367	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.141	chr5	-	6878	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4254	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	299	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTACTAGTGTCTTATT	NA	False	NA	-8	True	AATAAA	-21	NA	110585441	110577747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110582271_110582331
ES.26684.142	chr5	-	2834	5	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4271	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	72.8298530823728	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTACTAGTGTCTTATT	NA	False	NA	-8	True	AATAAA	-21	NA	110585458	110577747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110584479_110584595_110585382
ES.26684.143	chr5	-	2837	5	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4258	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	242.811011900202	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTACTAGTGTCTTATT	NA	False	NA	-8	True	AATAAA	-21	NA	110585445	110577747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110584730_110584921_110585378
ES.26684.144	chr5	-	3583	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	186.5	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTACTAGTGTCTTA	NA	False	NA	-10	True	AATAAA	-19	NA	110596369	110577749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580968_110595745
ES.26684.146	chr5	-	3260	5	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4214	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.8495402649882	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTACTAGTGTCTTA	NA	False	NA	-10	True	AATAAA	-19	NA	110585401	110577749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580345_110580968_110584479_110584595_110584730_110584921_110585330
ES.26684.147	chr5	-	2885	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4439	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.522013940528	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTACTAGTGTCTTA	NA	False	NA	-10	True	AATAAA	-19	NA	110585626	110577749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110585382
ES.26684.148	chr5	-	2626	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4427	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	249.876413897395	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTACTAGTGTCTTA	NA	False	NA	-10	True	AATAAA	-19	NA	110585614	110577749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110585566
ES.26684.149	chr5	-	3522	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4250	-11	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	79.5501239610739	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAACATTACTAGTGTCT	NA	False	NA	-12	True	AATAAA	-17	NA	110585437	110577751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110580012_110580345_110580449_110580766_110580968_110584479
ES.26684.15	chr5	-	4025	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.0992216868571	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110585449	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110585382
ES.26684.150	chr5	-	7487	1	Intergenic	novelGene_22240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	782	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGTGCCCATAGATGC	NA	False	NA	NA	False	NA	NA	NA	110589509	110582022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110582000_110589500
ES.26684.151	chr5	-	3582	2	Intergenic	novelGene_22238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGTGCCCATAGATGC	NA	False	NA	NA	False	NA	NA	NA	110585665	110582022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110582271_110582331
ES.26684.152	chr5	-	4917	3	Intergenic	novelGene_22239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAGTGCCCATAGATGC	NA	False	NA	NA	False	NA	NA	NA	110587552	110582022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110582271_110582331_110583405_110583956
ES.26684.153	chr5	-	2545	2	Intergenic	novelGene_22241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110585410	110582057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110582589_110583396
ES.26684.16	chr5	-	3791	13	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	61.7177153570098	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110534999	110509619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110534766
ES.26684.18	chr5	-	4615	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-35	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	76.3862512170875	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110596404	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.19	chr5	-	4092	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4262	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.8251454123016	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110585449	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110585382
ES.26684.2	chr5	-	4685	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	75.3198944847264	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596451	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.20	chr5	-	4037	18	ISM	ENSMUSG00000043323.18	ENSMUST00000069483.12	4720	19	15459	2	277	-2	3prime_fragment	FALSE	canonical	3	5	junction_10	47.7401414667619	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110580910	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766
ES.26684.21	chr5	-	6316	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	98	junction_7	68.0400535632424	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110596375	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.22	chr5	-	4579	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	75.5918057315077	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110596371	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.23	chr5	-	4494	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.9999064808163	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTGGTCCAGTGTTT	NA	False	NA	-3	True	GATAAA	-18	NA	110596369	110509621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110525948_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.25	chr5	-	4592	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	87.5804138428729	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGTGGTCCAGTGTT	NA	False	NA	-4	True	GATAAA	-17	NA	110596395	110509622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110543910_110543941_110565708_110565814_110580766_110580968_110595745
ES.26684.26	chr5	-	4095	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-318	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	42.4432044682813	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGTGGTCCAGTGTT	NA	False	NA	-4	True	GATAAA	-17	NA	110596786	110509622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110596715
ES.26684.27	chr5	-	4880	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	38	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.0350455993741	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAATGTGGTCCAGTG	NA	False	NA	-6	True	GATAAA	-15	NA	110596430	110509624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524245_110524337_110525222_110525274_110525903_110526106_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.28	chr5	-	4419	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-41	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.0524387929954	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAATGTGGTCCAGTG	NA	False	NA	-6	True	GATAAA	-15	NA	110596410	110509624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.29	chr5	-	3832	14	NNC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	-40	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	66.5901533314803	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAATGTGGTCCAGTG	NA	False	NA	-6	True	GATAAA	-15	NA	110535002	110509624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526978_110527134_110527460_110529466_110529513_110534766
ES.26684.3	chr5	-	4540	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.7529002363788	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596454	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.30	chr5	-	3695	15	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	102.762555715313	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTATTTGTGTACGTG	NA	False	NA	7	True	ATTAAA	-42	NA	110596395	110510281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526978_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.31	chr5	-	4064	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	2	150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	88.9927099382041	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGGTTATTTGTGTA	NA	False	NA	3	True	ATTAAA	-38	NA	110596367	110510285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110545507_110545658_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.32	chr5	-	3409	13	NIC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	-31	147	intron_retention	FALSE	canonical	2	5	junction_12	55.0279600647606	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCCTCTGGTTATTTGT	NA	False	NA	0	True	ATTAAA	-35	NA	110534993	110510288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526364_110526759_110526981_110527134_110527460_110534766
ES.26684.33	chr5	-	4138	19	FSM	ENSMUSG00000043323.18	ENSMUST00000069483.12	4720	19	-89	671	10	145	multi-exon	FALSE	canonical	3	5	junction_10	76.4440608840507	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCCTCTGGTTATTT	NA	False	NA	-2	True	ATTAAA	-33	NA	110596458	110510290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.34	chr5	-	3944	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	54.2538881095171	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACCCCTCTGGTTATT	NA	False	NA	-3	True	ATTAAA	-32	NA	110596373	110510291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110565708_110565814_110580766_110580965_110595745
ES.26684.35	chr5	-	4065	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	13	-144	13	144	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACCCCTCTGGTTATT	NA	False	NA	-3	True	ATTAAA	-32	NA	110596455	110510291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.36	chr5	-	3982	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	24	144	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	75.5918057315077	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACCCCTCTGGTTATT	NA	False	NA	-3	True	ATTAAA	-32	NA	110596444	110510291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.37	chr5	-	3849	16	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-24	140	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	94.0327602487559	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGAAACCCCTCTGGT	NA	False	NA	-7	True	ATTAAA	-28	NA	110596393	110510295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.38	chr5	-	4039	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	29	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.1304698222434	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGAAACCCCTCTGG	NA	False	NA	-8	True	ATTAAA	-27	NA	110596439	110510296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523966_110524263_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.39	chr5	-	3998	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	29	139	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	76.6509947750191	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGAAACCCCTCTGG	NA	False	NA	-8	True	ATTAAA	-27	NA	110596439	110510296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.4	chr5	-	6368	9	NIC	ENSMUSG00000043323.18	novel	4469	17	NA	NA	5258	3	intron_retention	FALSE	canonical	3	37	junction_6	45.243093395567	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110529570	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466
ES.26684.40	chr5	-	3411	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4254	137	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_17	35.0912798836895	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTAGAAACCCCTCT	NA	False	NA	-10	True	ATTAAA	-25	NA	110585441	110510298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110585378
ES.26684.41	chr5	-	4581	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	136	intron_retention	FALSE	canonical	1	4	junction_11	77.6392226190402	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTCTAGAAACCCCTC	NA	False	NA	-11	True	ATTAAA	-24	NA	110596395	110510299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.42	chr5	-	3881	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	2	135	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	85.5945885774913	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTCTAGAAACCCCT	NA	False	NA	-12	True	ATTAAA	-23	NA	110596367	110510300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110565708_110565814_110580766_110580968_110595745
ES.26684.43	chr5	-	4754	8	NIC	ENSMUSG00000043323.18	novel	2700	12	NA	NA	7988	135	intron_retention	FALSE	canonical	3	103	junction_7	28.642768079662	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTCTAGAAACCCCT	NA	False	NA	-12	True	ATTAAA	-23	NA	110526840	110510300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110526122_110526759
ES.26684.44	chr5	-	4080	16	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-19	135	intron_retention	FALSE	canonical	0	0	junction_9	94.3960921978353	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTCTAGAAACCCCT	NA	False	NA	-12	True	ATTAAA	-23	NA	110596388	110510300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526364_110526672_110526981_110527134_110527337_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.45	chr5	-	3786	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-18	134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	43.4770054166567	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596387	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110595745
ES.26684.46	chr5	-	3946	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.0824042136517	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596395	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110545507_110545658_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.47	chr5	-	3988	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	29	134	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	75.3198944847264	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596439	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.48	chr5	-	3826	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4	134	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	87.4150762486401	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596373	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.49	chr5	-	4713	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	24	134	intron_retention	FALSE	canonical	0	0	junction_12	82.4521671127672	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596444	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110532240_110532280_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.5	chr5	-	4655	18	NIC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	85.0740365534734	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596373	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.50	chr5	-	2391	10	NNC	ENSMUSG00000043323.18	novel	2571	14	NA	NA	7882	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.8983864420713	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110526946	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524245_110524337_110525222_110525274_110526740
ES.26684.51	chr5	-	4630	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-31	134	intron_retention	FALSE	canonical	3	103	junction_9	64.3612849467753	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596400	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.52	chr5	-	5416	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-11	134	intron_retention	FALSE	canonical	3	26	junction_8	77.5676116365587	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596380	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.53	chr5	-	3986	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	13	134	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	76.3862512170875	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTTTCTAGAAACCCC	NA	False	NA	-13	True	ATTAAA	-22	NA	110596455	110510301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.54	chr5	-	3884	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-26	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	96.9334299596893	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTTTCTAGAAACCC	NA	False	NA	-14	True	ATTAAA	-21	NA	110596395	110510302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563657_110563819_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.55	chr5	-	4273	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	33	133	intron_retention	FALSE	canonical	3	8	junction_11	78.2258729400435	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTTTCTAGAAACCC	NA	False	NA	-14	True	ATTAAA	-21	NA	110596435	110510302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526364_110526759_110526978_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.56	chr5	-	4697	4	ISM	ENSMUSG00000043323.18	ENSMUST00000198834.2	2571	14	12452	-463	12452	133	intron_retention	FALSE	canonical	3	156	junction_3	20.4993224820291	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTTTCTAGAAACCC	NA	False	NA	-14	True	ATTAAA	-21	NA	110522376	110510302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411
ES.26684.57	chr5	-	4011	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	80.9898637157228	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTTTCTAGAAACCC	NA	False	NA	-14	True	ATTAAA	-21	NA	110596373	110510302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110532240_110532280_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.58	chr5	-	3773	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.7529002363788	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAGTTTCTAGAAACCC	NA	False	NA	-14	True	ATTAAA	-21	NA	110596373	110510302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.59	chr5	-	3896	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-26	132	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	85.7699503031219	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110596395	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.6	chr5	-	5505	17	FSM	ENSMUSG00000043323.18	ENSMUST00000196801.5	4469	17	4	-1040	4	3	multi-exon	FALSE	canonical	3	37	junction_9	70.1826857209098	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596348	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.60	chr5	-	3723	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4290	132	intron_retention	FALSE	canonical	0	0	junction_17	58.0154495590894	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110585477	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110584479_110584595_110585382
ES.26684.61	chr5	-	3832	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-6	132	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	79.4018191787121	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110596375	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110580766_110580968_110595745
ES.26684.62	chr5	-	3764	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	34	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.0524387929954	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110596434	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.64	chr5	-	3468	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4247	132	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	51.0295544963775	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110585434	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110585378
ES.26684.65	chr5	-	3221	14	NIC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-31	132	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	62.498757384097	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110534993	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110534766
ES.26684.66	chr5	-	3031	15	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	17500	132	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	45.2681917429167	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGTTTCTAGAAACC	NA	False	NA	-15	True	ATTAAA	-20	NA	110563687	110510303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563657
ES.26684.67	chr5	-	4759	16	NIC	ENSMUSG00000043323.18	novel	4469	17	NA	NA	7	131	intron_retention	FALSE	canonical	3	13	junction_5	81.4120930138078	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596362	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.68	chr5	-	3206	14	FSM	ENSMUSG00000043323.18	ENSMUST00000198834.2	2571	14	-174	-461	-40	131	multi-exon	FALSE	canonical	2	10	junction_13	45.448455751296	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110535002	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110534766
ES.26684.69	chr5	-	3438	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	282	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.421464905881	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596070	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.70	chr5	-	4545	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	4	131	intron_retention	FALSE	canonical	3	12	junction_12	76.4150654139759	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596348	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.71	chr5	-	3868	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-25	131	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	84.8818802439602	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596394	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.72	chr5	-	3702	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-4440	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	42.9682986788868	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110585627	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110584479_110584595_110585382
ES.26684.73	chr5	-	3790	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	314	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	81.0240019308408	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596038	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563663_110563819_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.74	chr5	-	4021	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	14	131	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	75.5470672825888	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596454	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.75	chr5	-	3810	17	NIC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-6	131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	64.2978603357063	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596375	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110595745
ES.26684.77	chr5	-	3894	17	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	-9	131	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	84.8992049432738	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596378	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.78	chr5	-	6492	15	NIC	ENSMUSG00000043323.18	novel	4469	17	NA	NA	7	131	intron_retention	FALSE	canonical	3	37	junction_7	74.3970319794206	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596362	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.80	chr5	-	4512	16	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-5	131	intron_retention	FALSE	canonical	3	13	junction_5	76.4930207419097	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596357	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.81	chr5	-	4862	17	FSM	ENSMUSG00000043323.18	ENSMUST00000196801.5	4469	17	-41	-352	-24	131	multi-exon	FALSE	canonical	3	37	junction_9	70.1826857209098	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAGTTTCTAGAAAC	NA	False	NA	-16	True	ATTAAA	-19	NA	110596393	110510304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.85	chr5	-	5019	15	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4262	126	intron_retention	FALSE	canonical	0	0	junction_14	58.6151840048154	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTATAACAAGTTTCTA	NA	False	NA	-21	True	ATTAAA	-14	NA	110585449	110510309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110585382
ES.26684.86	chr5	-	4495	18	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	38	126	intron_retention	FALSE	canonical	0	0	junction_5	86.2956614000414	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTATAACAAGTTTCTA	NA	False	NA	-21	True	ATTAAA	-14	NA	110596314	110510309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523526_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.87	chr5	-	4053	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	32	125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	74.882838129753	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCTATAACAAGTTTCT	NA	False	NA	-22	True	ATTAAA	-13	NA	110596436	110510310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529539_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.89	chr5	-	3774	18	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	4	123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	94.6873931531824	956	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGTCTATAACAAGTTT	NA	False	NA	-24	True	ATTAAA	-11	NA	110596348	110510312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526978_110527134_110527460_110529466_110529513_110532240_110532280_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.9	chr5	-	4420	16	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.4229907682749	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCAGTGTTTTGTTT	NA	False	NA	2	True	GATAAA	-23	NA	110596380	110509616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.91	chr5	-	3897	19	NNC	ENSMUSG00000043323.18	novel	4720	19	NA	NA	36	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	76.9794745771419	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGTCTATAACAAGTT	NA	False	NA	-25	True	ATTAAA	-10	NA	110596316	110510313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110525948_110526196_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.92	chr5	-	3723	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-5	118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	74.7529002363788	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGGACAGTCTATAACA	NA	False	NA	-29	True	ATTAAA	-6	NA	110596357	110510317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.93	chr5	-	3798	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	75.5918057315077	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596404	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.94	chr5	-	4962	14	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	3360	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	53.777318638995	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110531468	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526196_110526364_110526759_110526981_110527134_110527460_110529466
ES.26684.95	chr5	-	3663	17	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	74.7529002363788	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596396	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110526740_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.96	chr5	-	3003	14	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.3153842948985	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596364	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110525222_110525274_110529460_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.97	chr5	-	4065	17	NIC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-24	0	intron_retention	FALSE	canonical	2	5	junction_14	80.929729356708	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596393	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110565708_110565814_110580766_110580968_110595745
ES.26684.98	chr5	-	3859	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	75	0	-24	0	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596393	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26684.99	chr5	-	3878	19	NNC	ENSMUSG00000043323.18	novel	3934	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	80.9898637157228	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596373	110510435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110532240_110532280_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ES.26685.1	chr5	-	147	1	Intergenic	novelGene_22242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTTTAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	110612005	110611858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110611900_110612000
ES.26686.1	chr5	+	2875	7	Antisense	novelGene_ENSMUSG00000105603.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.11010092660779	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTCAGCCTCTGAGA	9353	False	NA	NA	False	NA	NA	NA	110612865	110630300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_110613111_110613384_110613473_110614056_110614150_110615638_110615829_110622235_110622403_110625005_110625127_110628329
ES.26686.2	chr5	+	1186	3	Intergenic	novelGene_22247	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	4	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGGTTTCTCTATGTA	NA	False	NA	NA	False	NA	NA	NA	110615122	110625318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110615829_110622235_110622403_110625005
ES.26686.3	chr5	+	3582	3	Intergenic	novelGene_22248	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110618720	110625925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110618836_110622235_110623925_110624147
ES.26686.4	chr5	+	6912	2	Intergenic	novelGene_22249	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	110618811	110625946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110623925_110624147
ES.26687.1	chr5	-	4736	1	Intergenic	novelGene_22243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	110617079	110612343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110612300_110617100
ES.26687.2	chr5	-	4074	2	Intergenic	novelGene_22244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	110617079	110612343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110615676_110616337
ES.26687.3	chr5	-	3581	2	Intergenic	novelGene_22245	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	110617077	110612345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110615676_110616826
ES.26687.4	chr5	-	3013	3	Intergenic	novelGene_22246	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	110616960	110612346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110614678_110615616_110615676_110616337
ES.26688.1	chr5	-	208	1	Intergenic	novelGene_22250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGAGCTGGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	110624142	110623934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110623900_110624100
ES.26689.1	chr5	-	157	1	Intergenic	novelGene_22251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATATTTAG	NA	False	NA	NA	False	NA	NA	NA	110627088	110626931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110626900_110627100
ES.2669.1	chr10	+	176	1	Intergenic	novelGene_2034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTGTAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	41540047	41540223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41540000_41540200
ES.26690.1	chr5	+	1762	1	Intergenic	novelGene_22252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAACATTTAA	3352	False	NA	NA	False	AATAAA	-23	NA	110633409	110635171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110633400_110635200
ES.26691.1	chr5	-	117	1	Intergenic	novelGene_22253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110665439	110665322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110665300_110665400
ES.26692.1	chr5	+	172	1	Intergenic	novelGene_22254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATGTGCATG	NA	False	NA	NA	False	NA	NA	NA	110759988	110760160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110760000_110760200
ES.26693.1	chr5	+	162	1	Intergenic	novelGene_22255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110772265	110772427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110772300_110772400
ES.26694.1	chr5	+	175	1	Intergenic	novelGene_22256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAGATAAAT	NA	False	NA	NA	False	NA	NA	NA	110774448	110774623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110774400_110774600
ES.26695.1	chr5	+	2208	2	Intergenic	novelGene_22257	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110777162	110779795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110777249_110777673
ES.26696.1	chr5	+	2584	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	-30	2292	-30	333	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGATAGCTCCAACACA	NA	False	NA	13	True	AATAAA	-24	NA	110801286	110806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.10	chr5	+	5401	11	Fusion	ENSMUSG00000029504.6_ENSMUSG00000105161.2	novel	4846	15	NA	NA	13	17	intron_retention	FALSE	canonical	0	0	junction_10	44.0391870951315	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTCCTATTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	110801329	110810881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110803540_110803625_110803772_110803905_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110807356_110809970
ES.26696.11	chr5	+	2606	14	NNC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	13	325	intron_retention	FALSE	canonical	3	5	junction_6	37.5348358904824	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801329	110806062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803435_110803540_110803625_110803772_110803905_110804099_110804196_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.13	chr5	+	2963	12	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	14	324	intron_retention	FALSE	canonical	3	110	junction_6	15.9399700322209	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACAAATTCCCGATAGC	NA	False	NA	4	True	AATAAA	-15	NA	110801330	110806061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116
ES.26696.15	chr5	+	3075	11	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	16	325	intron_retention	FALSE	canonical	3	94	junction_4	19.7911596426283	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801332	110806062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.17	chr5	+	4128	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	17	701	17	-701	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGATACAGATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	110801333	110807661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.18	chr5	+	3942	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	18	886	18	-886	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGGTAGTCACAGTTG	NA	False	NA	NA	False	NA	NA	NA	110801334	110807476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.19	chr5	+	6073	15	Fusion	ENSMUSG00000029504.6_ENSMUSG00000105161.2	novel	4846	15	NA	NA	22	1238	multi-exon	FALSE	canonical	0	0	junction_1	36.9854494279542	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTTTGTCTTGTTTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	110801338	110809600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110801666_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.2	chr5	+	7785	12	Fusion	ENSMUSG00000029504.6_ENSMUSG00000105161.2	novel	4846	15	NA	NA	-13	21	intron_retention	FALSE	canonical	3	94	junction_6	19.2937278379347	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTATTTTTGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	110801303	110810885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803540_110803625_110803772_110803905_110804099_110804196_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.20	chr5	+	2756	12	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	23	328	intron_retention	FALSE	canonical	0	0	junction_10	41.439590603932	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTCCCGATAGCTCCA	NA	False	NA	8	True	AATAAA	-19	NA	110801339	110806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110805116_110805252_110805446
ES.26696.21	chr5	+	5846	13	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	23	786	intron_retention	FALSE	canonical	3	110	junction_6	15.2613800890425	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGCTCGAATGATGTTT	NA	False	NA	NA	False	NA	NA	NA	110801339	110809148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.22	chr5	+	3197	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	23	1626	23	999	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGAGGTTTGGTTCATG	NA	False	NA	NA	False	TATAAA	-17	NA	110801339	110806736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.23	chr5	+	3675	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	24	1147	24	-1147	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGTGTCATTCTGATT	NA	False	NA	NA	False	NA	NA	NA	110801340	110807215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.24	chr5	+	3566	12	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	25	999	intron_retention	FALSE	canonical	3	118	junction_6	14.3682386182766	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGAGGTTTGGTTCATG	NA	False	NA	NA	False	TATAAA	-17	NA	110801341	110806736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.25	chr5	+	3825	14	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	26	-1146	intron_retention	FALSE	canonical	3	94	junction_6	17.8066538989481	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGTGTCATTCTGATTC	NA	False	NA	NA	False	NA	NA	NA	110801342	110807216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.26	chr5	+	2971	11	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	28	321	intron_retention	FALSE	canonical	3	110	junction_4	15.8142340946377	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATACAAATTCCCGAT	NA	False	NA	1	True	AATAAA	-12	NA	110801344	110806058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.27	chr5	+	3174	12	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	28	297	intron_retention	FALSE	canonical	3	94	junction_4	18.1230869608832	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAATAAATGGATCA	NA	False	NA	-23	True	GATAAA	-18	NA	110801344	110806034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110802485_110802734_110803030_110803172_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.29	chr5	+	2329	13	NNC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	32	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.3762684699262	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACAAATTCCCGATAGC	NA	False	NA	4	True	AATAAA	-15	NA	110801348	110806061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110803435_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.3	chr5	+	7375	15	FSM	ENSMUSG00000029504.6_ENSMUSG00000105161.2	ENSMUST00000031478.6	4846	15	-6	-2523	-6	21	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTATTTTTGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	110801310	110810885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.30	chr5	+	1854	11	NNC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	-163	325	intron_retention	FALSE	canonical	0	0	junction_3	50.2477860208786	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110802839	110806062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110802881_110802957_110803030_110803172_110803284_110803435_110803540_110803625_110803772_110803905_110804099_110804258_110804313_110804390_110804508_110804681_110804784_110804953_110805252_110805446
ES.26696.31	chr5	+	1454	2	NIC	ENSMUSG00000029504.6	novel	482	3	NA	NA	-82	330	intron_retention	FALSE	canonical	3	132	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCCGATAGCTCCAAC	NA	False	NA	10	True	AATAAA	-21	NA	110804418	110806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110805252_110805446
ES.26696.32	chr5	+	5508	1	FSM	ENSMUSG00000105161.2	ENSMUST00000196771.2	1607	1	-3278	-623	-3278	623	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTGGCTTTGGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	110805979	110811487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110806000_110811500
ES.26696.4	chr5	+	2839	13	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	0	324	intron_retention	FALSE	canonical	3	94	junction_5	18.4458667456967	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATACAAATTCCCGATAGC	NA	False	NA	4	True	AATAAA	-15	NA	110801316	110806061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.5	chr5	+	3179	10	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	4	321	intron_retention	FALSE	canonical	3	94	junction_5	20.7584580411675	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATACAAATTCCCGAT	NA	False	NA	1	True	AATAAA	-12	NA	110801320	110806058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803540_110803625_110803772_110803905_110804099_110804196_110804508_110804681_110805252_110805446
ES.26696.6	chr5	+	2764	13	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	4	310	intron_retention	FALSE	canonical	3	110	junction_6	15.2613800890425	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCACTTGAACCTATAC	NA	False	NA	-10	True	AATAAA	-1	NA	110801320	110806047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.7	chr5	+	2633	14	NNC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	6	325	intron_retention	FALSE	canonical	3	5	junction_6	37.6162497934165	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAATTCCCGATAGCT	NA	False	NA	5	True	AATAAA	-16	NA	110801322	110806062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803435_110803540_110803625_110803772_110803905_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.8	chr5	+	6080	15	FSM	ENSMUSG00000029504.6_ENSMUSG00000105161.2	ENSMUST00000031478.6	4846	15	6	-1240	6	1240	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTCTTGTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	110801322	110809602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26696.9	chr5	+	2995	11	NIC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	8	333	intron_retention	FALSE	canonical	3	118	junction_6	14.981321704042	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGATAGCTCCAACACA	NA	False	NA	13	True	AATAAA	-24	NA	110801324	110806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110804099_110804196_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ES.26697.1	chr5	-	1920	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	154	1	-4	-1	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGGCTAAATGTTTT	8995	False	NA	NA	False	NA	NA	NA	110801129	110796284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.10	chr5	-	1869	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	180.699618264169	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8873	False	NA	-12	True	AATAAA	-14	NA	110801251	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797275_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.11	chr5	-	4091	3	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-168	intron_retention	FALSE	canonical	3	652	junction_2	70	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8873	False	NA	-12	True	AATAAA	-14	NA	110801251	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110797281_110797398_110800286_110800876
ES.26697.14	chr5	-	1614	12	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-4	-168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	208.181341801757	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8888	False	NA	-12	True	AATAAA	-14	NA	110801236	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798277_110799201_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.15	chr5	-	2425	12	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-8	-168	intron_retention	FALSE	canonical	3	589	junction_7	55.4372551286438	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8870	False	NA	-12	True	AATAAA	-14	NA	110801254	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798846_110798977_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.17	chr5	-	2007	14	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-168	intron_retention	FALSE	canonical	3	610	junction_8	50.4479343763472	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8873	False	NA	-12	True	AATAAA	-14	NA	110801251	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.18	chr5	-	2181	12	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-168	intron_retention	FALSE	canonical	3	610	junction_7	51.9262031975418	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8886	False	NA	-12	True	AATAAA	-14	NA	110801238	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798451_110798810_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.19	chr5	-	2008	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-2	-168	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	183.208646529757	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8876	False	NA	-12	True	AATAAA	-14	NA	110801248	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799408_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.21	chr5	-	1836	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	19	-169	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	180.450965695416	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTTTTTTAGTGTGG	8929	False	NA	-13	True	AATAAA	-13	NA	110801195	110796452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797299_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.22	chr5	-	3159	8	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-169	intron_retention	FALSE	canonical	3	610	junction_5	50.8061542150402	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTTTTTTAGTGTGG	8873	False	NA	-13	True	AATAAA	-13	NA	110801251	110796452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110797046_110797197_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110800286_110800876_110800998_110801088
ES.26697.23	chr5	-	2184	12	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-169	intron_retention	FALSE	canonical	3	589	junction_6	52.7640937264809	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTTTTTTAGTGTGG	8873	False	NA	-13	True	AATAAA	-13	NA	110801251	110796452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110797046_110797197_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.24	chr5	-	1869	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-3	-170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	185.346958156748	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGTTTTTTAGTGTG	8889	False	NA	-14	True	AATAAA	-12	NA	110801235	110796453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798463_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.25	chr5	-	1871	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-9	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	183.658400742425	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGTTTTTTAGTGTG	8869	False	NA	-14	True	AATAAA	-12	NA	110801255	110796453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800992_110801088
ES.26697.26	chr5	-	1861	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.927964464048	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGGTTTTTTAGTGTG	8873	False	NA	-14	True	AATAAA	-12	NA	110801251	110796453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796838_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.27	chr5	-	1839	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	0	-171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	183.69780252649	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGTTTTTTAGTGT	8910	False	NA	-15	True	AATAAA	-11	NA	110801214	110796454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798196_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.3	chr5	-	1933	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	-18	160	-18	-160	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGTGGTTTGGTTTG	8823	False	NA	-4	True	AATAAA	-22	NA	110801301	110796443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.4	chr5	-	1889	15	NNC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	185.531847202928	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGTGGTTTGGTTTG	8873	False	NA	-4	True	AATAAA	-22	NA	110801251	110796443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798319_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.5	chr5	-	2112	13	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-6	-164	intron_retention	FALSE	canonical	3	610	junction_8	52.3372477304644	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTAGTGTGGTTTGG	8872	False	NA	-8	True	AATAAA	-18	NA	110801252	110796447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.6	chr5	-	2774	10	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-2	-167	intron_retention	FALSE	canonical	3	640	junction_5	50.6296160827964	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8876	False	NA	-11	True	AATAAA	-15	NA	110801248	110796450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110797046_110797197_110797281_110797398_110797781_110797937_110797999_110798200_110798313_110798399_110799078_110799177_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.7	chr5	-	2089	13	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	-5	-168	intron_retention	FALSE	canonical	3	610	junction_7	52.5071423713003	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8873	False	NA	-12	True	AATAAA	-14	NA	110801251	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ES.26697.8	chr5	-	1336	11	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	1471	-168	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	213.140798534678	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTTTTAGTGTGGT	8786	False	NA	-12	True	AATAAA	-14	NA	110799654	110796451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799544
ES.26698.1	chr5	+	2025	1	Antisense	novelGene_ENSMUSG00000029505.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110828000	110830025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_110828000_110830000
ES.26699.1	chr5	+	4384	21	Intergenic	novelGene_22258	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTCCACGGGCACAGGAA	NA	False	NA	NA	False	NA	NA	NA	110851351	110918459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110851484_110852746_110852938_110855798_110855930_110856026_110856204_110856637_110856809_110858895_110859029_110866944_110867127_110867294_110867490_110868601_110868710_110872287_110872377_110874754_110874818_110875397_110875442_110877096_110877175_110877681_110877830_110881584_110881773_110883218_110883511_110887156_110887547_110888046_110888156_110889835_110889927_110903262_110904632_110918356
ES.26699.2	chr5	+	177	1	Intergenic	novelGene_22260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTAATTTGTTTT	3913	False	NA	NA	False	NA	NA	NA	110883846	110884023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110883800_110884000
ES.26699.3	chr5	+	162	1	Intergenic	novelGene_22261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2793	False	NA	NA	False	NA	NA	NA	110898080	110898242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110898100_110898200
ES.26699.4	chr5	+	2969	2	FSM	ENSMUSG00000086401.2	ENSMUST00000132267.2	2260	2	-715	6	-715	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAATGTCAACAGCA	NA	False	NA	NA	False	NA	NA	NA	110918099	110927120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110919129_110925180
ES.26699.5	chr5	+	195	1	Intergenic	novelGene_22262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	110920518	110920713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110920500_110920700
ES.26699.6	chr5	+	690	1	Intergenic	novelGene_22263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACCCAGAAGGAGGTGA	NA	False	NA	NA	False	NA	NA	NA	110920518	110921208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110920500_110921200
ES.267.1	chr1	-	4671	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTAGGTGAGTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	36117854	36113183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36113200_36117900
ES.2670.1	chr10	+	173	1	Intergenic	novelGene_2035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATGCCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	41555734	41555907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41555700_41555900
ES.26700.1	chr5	+	4008	14	Antisense	novelGene_ENSMUSG00000029512.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAATTGCAAACAATTT	NA	False	NA	NA	False	NA	NA	NA	110936615	110945341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_110938345_110938713_110938806_110938919_110939067_110939468_110939595_110939968_110940061_110940262_110940326_110940833_110940982_110941681_110941770_110942058_110942112_110942451_110942529_110942603_110942674_110943599_110943699_110944020_110944096_110944192
ES.26700.2	chr5	+	2959	22	Antisense	novelGene_ENSMUSG00000029512.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATGCGGCTCGGAGCCCC	NA	False	NA	NA	False	NA	NA	NA	110936615	110957890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_110936739_110936813_110936922_110937205_110937401_110938076_110938345_110938713_110938821_110938917_110939062_110939464_110939595_110939968_110940061_110940263_110940326_110940833_110940982_110941681_110941770_110942058_110942112_110942451_110942537_110942616_110942674_110943599_110943699_110944020_110944096_110944192_110944701_110946746_110946785_110946989_110947025_110956872_110956912_110956991_110957086_110957479
ES.26701.1	chr5	-	7145	36	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	-329	41	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	27.0959896121405	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTTCAGTCTGTATT	NA	False	NA	41	True	AATAAA	-23	NA	110856138	110812197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831238_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028
ES.26701.14	chr5	-	8503	48	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	-25856	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	29.0156761302352	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTCTGTCTTAATA	NA	False	NA	-3	True	AATAAA	-16	NA	110881665	110812241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110829488_110829537_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584
ES.26701.17	chr5	-	10878	53	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	27.9046347235232	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTCTGTCTTAATA	NA	False	NA	-3	True	AATAAA	-16	NA	110918450	110812241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816591_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831238_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.19	chr5	-	6224	31	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	-4398	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	27.4055144491437	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	NA	False	NA	-5	True	AATAAA	-14	NA	110851397	110812243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839685_110843128_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317
ES.26701.20	chr5	-	4298	20	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	7566	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	39.8711914965849	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	7304	False	NA	-5	True	AATAAA	-14	NA	110832467	110812243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816591_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110829488_110829537_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398
ES.26701.21	chr5	-	11017	54	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	29.7526889391531	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	NA	False	NA	-5	True	AATAAA	-14	NA	110918466	110812243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822824_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110901669_110901781_110903262_110904633_110918357
ES.26701.24	chr5	-	9367	51	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	29902	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.236673097416	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	False	NA	-6	True	AATAAA	-13	NA	110888119	110812244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814119_110814170_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824720_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047
ES.26701.26	chr5	-	2881	10	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-7757	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.1616670187298	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	False	NA	-6	True	AATAAA	-13	NA	110824430	110812244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816591_110820974_110821154_110821272_110821481_110822726_110822837_110822909_110822956_110824316
ES.26701.29	chr5	-	10936	53	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	27.2813185208612	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	False	NA	-6	True	AATAAA	-13	NA	110918466	110812244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820956_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.31	chr5	-	4432	21	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	6786	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	28.4367719687028	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	6524	False	NA	-6	True	AATAAA	-13	NA	110833247	110812244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820992_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217
ES.26701.34	chr5	-	3177	11	NNC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	-6571	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	36.4698505617997	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	False	NA	-6	True	AATAAA	-13	NA	110823244	110812244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110823083
ES.26701.36	chr5	-	5864	8	NIC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	-6930	-3	intron_retention	FALSE	canonical	3	96	junction_5	13.5736840231082	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTTCTTGTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	110823603	110812246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110818963_110820974_110821160_110821272_110821481_110822726
ES.26701.37	chr5	-	10877	53	NIC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	26.2101980581704	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTTCTTGTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	110918448	110812246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816591_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.38	chr5	-	1936	2	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	90247	13851	-11473	9650	internal_fragment	FALSE	canonical	3	99	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAGCGTCGTATGACTT	7905	False	NA	NA	False	NA	NA	NA	110828146	110826089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110827887_110828007
ES.26701.39	chr5	-	4328	21	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-30	-6216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.4395290781937	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTACTGTGTAAGAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	110918481	110851422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867295_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.40	chr5	-	4049	17	NNC	ENSMUSG00000029505.18	novel	10420	52	NA	NA	-2	-11117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.8661392594418	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTTCCCTGAAGGCATAT	NA	False	NA	NA	False	NA	NA	NA	110918453	110856323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887545_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.41	chr5	-	3832	17	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	-68	44313	-10	-11345	5prime_fragment	FALSE	canonical	3	45	junction_5	7.14142842854285	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCAATTTAGTGAAAAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	110918461	110856551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.42	chr5	-	7354	15	NIC	ENSMUSG00000029505.18	novel	10685	51	NA	NA	1	-11353	intron_retention	FALSE	canonical	3	7	junction_12	15.2536379066685	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACATATATCAATTTAG	NA	False	NA	NA	False	ATTAAA	-16	NA	110918450	110856559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110887548_110889835_110889927_110903262_110904633_110918357
ES.26701.43	chr5	-	3500	1	Intergenic	novelGene_22259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTGGGGTTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	110866605	110863105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_110863100_110866600
ES.26701.44	chr5	-	5170	1	NIC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	28873	1559	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACACACCAGAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	110889148	110883978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110884000_110889100
ES.26701.45	chr5	-	3298	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	-20	395	-20	3	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTCCTTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	110918471	110885932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.46	chr5	-	2181	4	ISM	ENSMUSG00000029505.18	ENSMUST00000112436.9	10685	51	124	74686	-8	-994	5prime_fragment	FALSE	canonical	3	7	junction_1	21.4527905462721	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTTGCTGTTAGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	110918459	110886929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110887548_110889835_110889927_110903262_110904633_110918357
ES.26701.47	chr5	-	2404	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	-131	1400	1	-1002	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTATTATTGTTGC	NA	False	NA	NA	False	ATTAAA	-8	NA	110918582	110886937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ES.26701.5	chr5	-	11330	56	NNC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	-15	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	34.0749780958316	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAAAGGCTTTCAGTCT	NA	False	NA	36	True	AATAAA	-18	NA	110918466	110812202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868719_110871578_110871727_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110901669_110901781_110903262_110904633_110916176_110916279_110918357
ES.26702.1	chr5	-	2971	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	14	-1171	9	1171	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGTGAGTGTGTGT	NA	False	NA	-2	True	AATAAA	-16	NA	110928448	110920361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ES.26702.10	chr5	-	2059	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	83	junction_4	183.244883966784	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928488	110921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ES.26702.100	chr5	-	5157	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_23	230.467485782146	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957952	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944323_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.102	chr5	-	4953	29	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	250.379189471506	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957952	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935058_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479_110957716_110957913
ES.26702.103	chr5	-	4061	5	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-147	-1	intron_retention	FALSE	canonical	3	726	junction_4	175.189183456057	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110937066	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813
ES.26702.104	chr5	-	5284	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	8	-1	intron_retention	FALSE	canonical	3	530	junction_12	188.43794593302	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957955	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110957086_110957479
ES.26702.105	chr5	-	5119	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.745941235547	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957928	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935050_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.107	chr5	-	8259	25	ISM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	7275	1	-6988	-1	3prime_fragment	FALSE	canonical	3	530	junction_12	193.004803480811	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110950688	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989
ES.26702.108	chr5	-	7397	22	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	32	-1	intron_retention	FALSE	canonical	3	530	junction_8	204.72729497095	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957887	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.109	chr5	-	3326	13	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	1080	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.796321427292	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110938978	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110933611_110933665_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917
ES.26702.11	chr5	-	1784	6	NNC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	210.534557733404	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928441	110921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928113
ES.26702.110	chr5	-	6158	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	intron_retention	FALSE	canonical	3	530	junction_12	192.548566341066	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.111	chr5	-	7008	8	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-146	-1	intron_retention	FALSE	canonical	3	530	junction_4	169.945729632751	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110941417	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110935559_110935638_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831
ES.26702.112	chr5	-	5337	29	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	264.689267185629	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957995	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110942768_110942862_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.113	chr5	-	5257	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	530	junction_12	187.787271058498	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957929	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.114	chr5	-	6377	25	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	intron_retention	FALSE	canonical	3	530	junction_10	181.187958730399	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.115	chr5	-	5220	27	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	2	junction_3	221.588926543868	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957924	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935058_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.117	chr5	-	5643	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	32	-1	intron_retention	FALSE	canonical	2	7	junction_8	241.235765175896	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957887	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.118	chr5	-	5114	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	230.428157572961	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936113_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.119	chr5	-	4771	26	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	1616	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	240.738975656207	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110956303	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956125
ES.26702.12	chr5	-	4127	4	NIC	ENSMUSG00000029507.17	novel	1563	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	492	junction_3	32.2593655651606	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110928461	110921535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110925618_110927552
ES.26702.120	chr5	-	5221	27	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	262.227669386196	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957951	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946809_110956858_110956913_110956992_110957086_110957479
ES.26702.121	chr5	-	4423	5	ISM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	20054	1	-577	-1	intron_retention	FALSE	canonical	3	980	junction_2	74.9779134145516	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110937909	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638
ES.26702.122	chr5	-	2598	4	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	228	-2	intron_retention	FALSE	canonical	3	24	junction_1	530.584792679005	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110936305	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934949_110935108_110935439_110935812_110935975
ES.26702.124	chr5	-	6324	26	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_8	239.274724114353	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957928	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937421_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.126	chr5	-	4202	5	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-100	-2	intron_retention	FALSE	canonical	3	726	junction_4	164.290139691949	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110937432	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935559_110935638_110936739_110936813
ES.26702.128	chr5	-	5906	27	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_6	258.75145141519	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957919	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936212_110936594_110936739_110936813_110936924_110937207_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.129	chr5	-	8743	18	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-2	intron_retention	FALSE	canonical	2	3	junction_13	247.757248086184	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957919	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935812_110935975_110938347_110938715_110938803_110938917_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110944320_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.13	chr5	-	5821	30	Fusion	ENSMUSG00000029512.12_ENSMUSG00000029507.17	novel	5213	28	NA	NA	133	-2	intron_retention	TRUE	canonical	0	0	junction_5	201.186758440262	1313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110957786	110921535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110933862_110934094_110934165_110934302_110934949_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.130	chr5	-	5131	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	253.918379031287	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957919	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936113_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.132	chr5	-	6895	24	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	530	junction_8	176.66394999754	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957927	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935559_110935638_110935812_110935975_110936739_110936813_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.133	chr5	-	4143	4	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-66	-2	intron_retention	FALSE	canonical	3	726	junction_3	185.943241041154	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110936985	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110935108_110935439_110935559_110935638_110936739_110936813
ES.26702.136	chr5	-	8656	17	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-2	intron_retention	FALSE	canonical	3	530	junction_6	152.253373833718	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957919	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110935108_110935439_110936739_110936813_110938347_110938715_110938803_110938917_110939064_110939466_110940058_110940262_110940324_110940831_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.138	chr5	-	5254	29	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	284.385490387356	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957928	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110947144_110947205_110956870_110956913_110956992_110957086_110957479
ES.26702.139	chr5	-	5676	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	530	junction_10	177.877234068894	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGTCAATTTCAT	NA	False	NA	-4	True	AATAAA	-13	NA	110957920	110932355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.14	chr5	-	6060	3	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	3	3	-2	-2	intron_retention	FALSE	canonical	3	530	junction_2	20.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGCCTATTTTCC	NA	False	NA	-2	True	ATTAAA	-19	NA	110928459	110921535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110921846_110922387_110923080_110923401
ES.26702.141	chr5	-	5316	29	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	284.734469483842	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957919	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941240_110941373_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.142	chr5	-	4990	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	218.577581471854	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957950	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935702_110936072_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.143	chr5	-	5315	29	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	265.679173947428	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957951	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941240_110941358_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.144	chr5	-	5996	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	1	-3	intron_retention	FALSE	canonical	3	545	junction_10	185.527546202714	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957918	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.145	chr5	-	4558	5	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-709	-3	intron_retention	FALSE	canonical	3	726	junction_4	178.321339160517	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110938041	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110936739_110936813
ES.26702.146	chr5	-	9096	23	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-3	intron_retention	FALSE	canonical	3	530	junction_10	204.776717749434	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957919	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936924_110937207_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.147	chr5	-	5109	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.903789414443	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957951	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.148	chr5	-	5086	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	52	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	257.399712115189	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957867	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940934_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.149	chr5	-	5298	29	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	265.679173947428	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957919	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941240_110941373_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.15	chr5	-	2868	6	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	1	-4	intron_retention	FALSE	canonical	3	63	junction_3	190.435920981311	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928461	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110925618_110927552_110927764_110928105
ES.26702.150	chr5	-	5291	27	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	41	junction_3	216.379860622102	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGGTGTCAATTTCA	NA	False	NA	-5	True	AATAAA	-12	NA	110957974	110932356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935098_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110957086_110957479
ES.26702.151	chr5	-	5655	26	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	14	-6	intron_retention	FALSE	canonical	0	0	junction_14	227.856495189406	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTGGTGTCAATT	NA	False	NA	-8	True	AATAAA	-9	NA	110957949	110932359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940934_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.154	chr5	-	4225	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-65	1053	-65	459	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGGTCTTTGGAG	NA	False	NA	1	True	TATAAA	-21	NA	110958028	110933406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.156	chr5	-	3709	9	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	458	intron_retention	FALSE	canonical	3	530	junction_7	210.996408440997	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGGTCTTTGGA	NA	False	NA	0	True	TATAAA	-20	NA	110940058	110933407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967
ES.26702.157	chr5	-	4618	27	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-13	458	intron_retention	FALSE	canonical	3	128	junction_10	218.047087906211	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGGTCTTTGGA	NA	False	NA	0	True	TATAAA	-20	NA	110957976	110933407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.158	chr5	-	4742	27	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	458	intron_retention	FALSE	canonical	1	4	junction_6	234.210384991507	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGGTCTTTGGA	NA	False	NA	0	True	TATAAA	-20	NA	110957919	110933407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936093_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.159	chr5	-	4039	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	32	458	at_least_one_novel_splicesite	FALSE	canonical	1	29	junction_23	230.467485782146	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGGTCTTTGGA	NA	False	NA	0	True	TATAAA	-20	NA	110957887	110933407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944323_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.16	chr5	-	1863	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	0	5	0	-4	multi-exon	FALSE	canonical	3	62	junction_4	212.004454879818	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928462	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
ES.26702.160	chr5	-	4271	29	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-32	457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	284.734469483842	1031	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCTGGTCTTTGG	NA	False	NA	-1	True	TATAAA	-19	NA	110957995	110933408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940911_110941240_110941373_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.162	chr5	-	4194	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	457	intron_retention	FALSE	canonical	3	530	junction_12	188.43794593302	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCTGGTCTTTGG	NA	False	NA	-1	True	TATAAA	-19	NA	110957919	110933408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110957086_110957479
ES.26702.163	chr5	-	4180	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	457	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	231.647158488217	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTGTCTGGTCTTTGG	NA	False	NA	-1	True	TATAAA	-19	NA	110957919	110933408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
ES.26702.164	chr5	-	2722	22	ISM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	-68	2651	-24	-488	5prime_fragment	FALSE	canonical	3	128	junction_5	123.119229494023	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAATGTTCTCAGGTAA	NA	False	NA	NA	False	NA	NA	NA	110957987	110936610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.165	chr5	-	2664	22	ISM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	13	4260	13	-491	5prime_fragment	FALSE	canonical	3	530	junction_6	54.4962500530199	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACCAGAATGTTCTCAGG	NA	False	NA	NA	False	NA	NA	NA	110957950	110936613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.18	chr5	-	3459	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	83	junction_4	195.991071225196	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928459	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110925618_110927552_110927764_110928427
ES.26702.19	chr5	-	1581	5	NNC	ENSMUSG00000029507.17	novel	1814	6	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.631434165263	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928441	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110925475_110925618_110928105
ES.26702.2	chr5	-	2694	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	-18	-1166	-18	1165	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTATGTGTGTGAGT	NA	False	NA	-8	True	AATAAA	-10	NA	110928499	110920367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ES.26702.21	chr5	-	1510	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	48	5	4	-4	multi-exon	FALSE	canonical	3	14	junction_5	204.990146104636	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928477	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
ES.26702.22	chr5	-	1572	7	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	232.058481613771	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTCTTTGCCTATTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	110928493	110921537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928427
ES.26702.23	chr5	-	2026	8	Fusion	ENSMUSG00000029512.12_ENSMUSG00000029507.17	novel	1868	7	NA	NA	0	-5	multi-exon	FALSE	canonical	0	0	junction_5	198.398382975636	1313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCTTTGCCTATTT	NA	False	NA	-5	True	ATTAAA	-16	NA	110957919	110921538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110956870_110956913_110956992_110957086_110957479
ES.26702.25	chr5	-	1381	5	NNC	ENSMUSG00000029507.17	novel	1563	6	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	263.54743406074	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCTTTGCCTATTT	NA	False	NA	-5	True	ATTAAA	-16	NA	110928521	110921538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928453
ES.26702.26	chr5	-	1478	6	NNC	ENSMUSG00000029507.17	novel	1563	6	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	205.782020594609	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	False	NA	-8	True	ATTAAA	-13	NA	110928483	110921541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928453
ES.26702.27	chr5	-	1683	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	20	111	15	-110	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCGACTTTAGCCCAT	NA	False	NA	-110	True	ATTAAA	-18	NA	110928442	110921643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ES.26702.28	chr5	-	1382	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	14	114	-5	-114	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTGCCGACTTTAGC	NA	False	NA	-114	True	ATTAAA	-14	NA	110928467	110921647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ES.26702.29	chr5	-	5290	29	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-87	5248	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	229.621416461878	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATTTACATTTCAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	110958050	110927105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110927113_110932370_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.3	chr5	-	2518	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	1	1165	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	246.215733656483	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTATGTGTGTGAGT	NA	False	NA	-8	True	AATAAA	-10	NA	110928461	110920367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928427
ES.26702.30	chr5	-	6061	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	12	-860	12	860	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCATGGAGTCCATGTT	NA	False	NA	NA	False	AGTAAA	-18	NA	110957951	110931493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.31	chr5	-	5307	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	-93	-1	-93	1	multi-exon	FALSE	canonical	3	530	junction_12	186.450389110485	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110958056	110932352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.32	chr5	-	6246	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	1	intron_retention	FALSE	canonical	3	530	junction_10	184.003886915467	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110957919	110932352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.33	chr5	-	5298	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	-110	-1607	-66	1	multi-exon	FALSE	canonical	3	128	junction_11	217.248929557064	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	False	NA	-1	True	AATAAA	-16	NA	110958029	110932352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.34	chr5	-	5666	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-25	0	intron_retention	FALSE	canonical	3	530	junction_11	186.708221723553	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957988	110932353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.35	chr5	-	5619	27	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	12	0	intron_retention	FALSE	canonical	3	41	junction_3	212.57746586617	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957951	110932353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935098_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.36	chr5	-	5421	26	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_7	262.837641139925	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957919	110932353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.37	chr5	-	6582	24	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	8	0	intron_retention	FALSE	canonical	2	3	junction_19	236.571494127353	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957911	110932353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944320_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.39	chr5	-	5118	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	256.791621553085	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957919	110932353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940911_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.40	chr5	-	5421	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	7	junction_7	238.065201152961	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957938	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.41	chr5	-	5568	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	530	junction_11	171.591527666327	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957987	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.44	chr5	-	5588	24	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	47	-1	intron_retention	FALSE	canonical	0	0	junction_21	248.100587869766	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957872	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110956840_110956913_110956992_110957086_110957479
ES.26702.46	chr5	-	5294	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	530	junction_11	170.430489570229	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957973	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.47	chr5	-	5223	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	257.124640851056	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957967	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936909_110937203_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.48	chr5	-	5462	25	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	12	-1	intron_retention	FALSE	canonical	2	3	junction_20	281.407101184782	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957951	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944320_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.49	chr5	-	5142	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	232.960325015978	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957962	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940911_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.5	chr5	-	1551	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	-39	-2	5	1	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTATTTTCCTTTT	NA	False	NA	2	True	ATTAAA	-23	NA	110928520	110921531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ES.26702.50	chr5	-	3964	4	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	117	-1	intron_retention	FALSE	canonical	3	1073	junction_3	41.7718671941881	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110936802	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110935108_110935439_110935559_110935638
ES.26702.51	chr5	-	6999	23	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	32	-1	intron_retention	FALSE	canonical	3	545	junction_7	174.046469523857	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957887	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110938347_110938715_110938803_110938917_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.53	chr5	-	4973	29	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	229.621416461878	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479_110957705_110957899
ES.26702.54	chr5	-	3264	9	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-1015	-1	intron_retention	FALSE	canonical	1	2	junction_3	349.937851625114	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110938347	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935058_110935439_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077
ES.26702.55	chr5	-	5339	27	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	128	junction_11	221.130998819825	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957975	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.56	chr5	-	7299	18	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-1834	-1	intron_retention	FALSE	canonical	2	7	junction_6	264.746075379911	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110945534	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110941770_110942058_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192
ES.26702.57	chr5	-	5244	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	231.647158488217	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957929	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
ES.26702.58	chr5	-	5312	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	530	junction_11	178.463747499591	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957983	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.59	chr5	-	3744	6	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	636	junction_5	215.645635244491	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110937341	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935812_110935975_110936739_110936813_110936924_110937207
ES.26702.6	chr5	-	1830	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	-15	-1	4	1	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTATTTTCCTTTT	NA	False	NA	2	True	ATTAAA	-23	NA	110928477	110921531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ES.26702.60	chr5	-	6788	23	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	128	junction_6	223.914299758554	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957978	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.61	chr5	-	5622	27	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	128	junction_10	218.047087906211	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957927	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.62	chr5	-	4968	27	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	235.159838000208	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938230_110938913_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.63	chr5	-	4950	11	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	309	-1	intron_retention	FALSE	canonical	3	530	junction_7	118.504683451752	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110940962	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831
ES.26702.64	chr5	-	5584	25	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-1	intron_retention	FALSE	canonical	2	7	junction_6	251.814384765843	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110936739_110936813_110936924_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.65	chr5	-	5896	27	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	7	junction_19	259.224734579383	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957940	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110942768_110942968_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.66	chr5	-	4992	27	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	261.273179940485	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.68	chr5	-	4984	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	236.786102387838	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957929	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.69	chr5	-	5457	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	intron_retention	FALSE	canonical	3	530	junction_12	189.445188088642	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.7	chr5	-	1656	5	NIC	ENSMUSG00000029507.17	novel	1814	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	214.321020900891	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928443	110921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928105
ES.26702.70	chr5	-	5050	27	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	236.025146589267	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.72	chr5	-	5242	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	269.122488061193	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942680_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
ES.26702.73	chr5	-	5919	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	9	-1	intron_retention	FALSE	canonical	3	530	junction_10	170.553423888235	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957910	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.75	chr5	-	5355	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	265.870498711399	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936181_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940497_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.76	chr5	-	4749	16	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-839	-1	intron_retention	FALSE	canonical	3	530	junction_11	229.251787827755	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110942110	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680
ES.26702.78	chr5	-	5186	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	241.709384616727	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957969	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935058_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.79	chr5	-	5034	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	210.959168347951	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957921	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.8	chr5	-	1300	5	NNC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	231.620783825632	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928508	110921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110928453
ES.26702.80	chr5	-	5247	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	229.287774209443	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957984	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936181_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.81	chr5	-	5934	5	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	474	-1	intron_retention	FALSE	canonical	3	545	junction_4	242.987010969722	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110939584	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110935812_110935975_110938347_110938715_110938803_110938917
ES.26702.83	chr5	-	5668	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	intron_retention	FALSE	canonical	3	530	junction_10	169.316583948531	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.84	chr5	-	5228	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	230.848889701777	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939406_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.85	chr5	-	5770	26	NIC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	128	junction_9	210.658867366176	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957995	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.86	chr5	-	5253	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_24	231.052010486965	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957955	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946940_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.87	chr5	-	5288	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	249.8697163953	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957983	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935098_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
ES.26702.88	chr5	-	6096	26	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	32	-1	intron_retention	FALSE	canonical	3	530	junction_10	192.043345107296	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957887	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.89	chr5	-	5170	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	232.567314030918	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957927	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957080_110957479
ES.26702.9	chr5	-	1362	5	NIC	ENSMUSG00000029507.17	novel	1510	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	246.215733656483	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928471	110921533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552_110927764_110928427
ES.26702.90	chr5	-	5249	29	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	283.799788853095	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957889	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110942768_110942862_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.91	chr5	-	6413	24	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	545	junction_8	179.435904590839	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957969	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110937402_110938077_110938347_110938715_110938803_110938917_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.92	chr5	-	5213	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	230.428157572961	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957919	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936212_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.93	chr5	-	7429	22	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-5361	-1	intron_retention	FALSE	canonical	3	530	junction_10	189.619454210179	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110949061	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989
ES.26702.94	chr5	-	5213	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	233.160718044351	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957995	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944336_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ES.26702.95	chr5	-	5283	28	NNC	ENSMUSG00000029512.12	novel	3581	28	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	255.77541803676	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110957950	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
ES.26702.96	chr5	-	4682	3	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-63	-1	intron_retention	FALSE	canonical	3	636	junction_2	45	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110937395	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110936739_110936813_110936924_110937207
ES.26702.97	chr5	-	4566	22	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	-634	-1	intron_retention	FALSE	canonical	3	530	junction_11	204.947756187863	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGTCAATTTCATC	NA	False	NA	-3	True	AATAAA	-14	NA	110944334	110932354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192
ES.26703.1	chr5	+	207	1	Intergenic	novelGene_22264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCAGGCTGGCTATGA	NA	False	NA	NA	False	NA	NA	NA	110973700	110973907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_110973700_110973900
ES.26704.1	chr5	-	1992	6	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	29	1212	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	141.291754890369	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTTTGGTCTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	110987614	110975723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983840_110983936_110984172_110984270_110987361
ES.26704.2	chr5	-	801	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	0	3	0	-3	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGCTAATTGGAAATAGA	NA	False	NA	0	True	AATAAA	-21	NA	110987643	110976938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
ES.26704.3	chr5	-	933	7	NNC	ENSMUSG00000043510.13	novel	804	6	NA	NA	57	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	173.879907471284	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCTGCTAATTGGAA	NA	False	NA	-5	True	AATAAA	-16	NA	110987586	110976943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110986624_110986819_110987361
ES.26704.5	chr5	-	617	6	NNC	ENSMUSG00000043510.13	novel	804	6	NA	NA	-75	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	149.983465755396	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987718	110976944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987614
ES.26704.6	chr5	-	704	5	NIC	ENSMUSG00000043510.13	novel	804	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	152.686566206723	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTCTGCTAATTGGA	NA	False	NA	-6	True	AATAAA	-15	NA	110987642	110976944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_110977078_110978801_110978850_110982520_110982666_110984172_110984270_110987361
ES.26704.7	chr5	-	4347	2	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	0	6124	0	-6113	intron_retention	FALSE	canonical	3	439	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAGAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110987643	110983059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110983936_110984172
ES.26704.8	chr5	-	576	3	ISM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	13	6790	13	-6779	5prime_fragment	FALSE	canonical	3	372	junction_2	33.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAATCAGTGTTCTTT	NA	False	NA	NA	False	TTTAAA	-10	NA	110987630	110983725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_110983936_110984172_110984270_110987361
ES.26705.1	chr5	+	2191	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-22	0	combination_of_known_splicesites	TRUE	canonical	3	52	junction_11	68.5178679240099	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9156	False	NA	19	True	NA	NA	NA	110987822	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.10	chr5	+	2398	16	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	103.102193100934	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9186	False	NA	19	True	NA	NA	NA	110987852	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111003936_111004044_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.11	chr5	+	3950	18	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	108.472885008222	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9187	False	NA	19	True	NA	NA	NA	110987853	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111003936_111004044_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111017866_111019783_111019892_111019974_111021345_111021386_111021734
ES.26705.12	chr5	+	2141	14	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	85.09889826083	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9193	False	NA	19	True	NA	NA	NA	110987859	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989084_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.13	chr5	+	1065	6	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-5	-28	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	110.44202098839	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGTGTTGGGATAA	9194	False	NA	NA	False	AATAAA	-15	NA	110987860	110997731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461
ES.26705.14	chr5	+	2286	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-5	3	combination_of_known_splicesites	FALSE	canonical	3	52	junction_12	80.9591733845031	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTAGTAGTTTGTTG	9194	False	NA	22	True	NA	NA	NA	110987860	111022002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.15	chr5	+	3788	15	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_12	104.30970858996	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9201	False	NA	19	True	NA	NA	NA	110987867	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003002_111003112_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014647_111014694_111015960_111019892_111019974_111021345
ES.26705.17	chr5	+	1897	14	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	-236	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	85.09889826083	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGTTTGATGACCTG	9201	False	NA	NA	False	ATTAAA	-17	NA	110987867	111021763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989084_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.18	chr5	+	4185	16	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	86.2784639022586	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9201	False	NA	26	True	AAAACA	-2	NA	110987867	111022006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111017866_111019783_111019892_111019974_111021345
ES.26705.19	chr5	+	2490	16	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	101.833109656055	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	9201	False	NA	26	True	AAAACA	-2	NA	110987867	111022006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111020051_111020316_111020447_111021345
ES.26705.2	chr5	+	2438	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-19	4	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTAGTAGTTTGTTGT	9159	False	NA	23	True	NA	NA	NA	110987825	111022003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.20	chr5	+	1854	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	5	-535	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCAATTGTCTTCTCC	9204	False	NA	NA	False	AAGAAA	-14	NA	110987870	111021464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.22	chr5	+	3460	5	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	6	1751	intron_retention	FALSE	non_canonical	0	0	junction_4	133.666328968817	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	9205	False	NA	NA	False	NA	NA	NA	110987871	110999510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110998195_110998255
ES.26705.23	chr5	+	5139	15	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	72.9113243912754	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAATGTTAGTAGTTT	9205	False	NA	18	True	NA	NA	NA	110987871	111021998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111017010_111019974_111021345
ES.26705.24	chr5	+	2976	16	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	84.8376226813448	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9205	False	NA	19	True	NA	NA	NA	110987871	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003002_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.25	chr5	+	4374	12	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	6	-3	intron_retention	FALSE	canonical	3	120	junction_1	54.6099618557301	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACAATGTTAGTAGT	9205	False	NA	16	True	NA	NA	NA	110987871	111021996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111015960_111019892_111019974_111021345
ES.26705.26	chr5	+	2907	9	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	15	-3959	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	113.218193657203	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATGACTTATGTAT	9214	False	NA	NA	False	NA	NA	NA	110987880	111010627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003002_111003112_111003590_111003700_111006239_111006294_111008728
ES.26705.27	chr5	+	3710	13	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	16	-3	intron_retention	FALSE	canonical	3	120	junction_1	52.5071423713003	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACAATGTTAGTAGT	9215	False	NA	16	True	NA	NA	NA	110987881	111021996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111015960_111019892_111019974_111021345
ES.26705.28	chr5	+	3793	13	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	16	-4	intron_retention	FALSE	canonical	1	1	junction_5	81.4007149163254	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTAGTTTGTTGTGGCT	9215	False	NA	27	True	AAAACA	-3	NA	110987881	111022007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003518_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111015960_111019892_111019974_111021345
ES.26705.29	chr5	+	2231	17	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	82.8897752666154	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9216	False	NA	19	True	NA	NA	NA	110987882	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345_111021386_111021531
ES.26705.3	chr5	+	2277	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	75.7018857770669	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9159	False	NA	19	True	NA	NA	NA	110987825	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997488_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.30	chr5	+	3042	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	17	0	intron_retention	FALSE	canonical	3	57	junction_1	59.9617224841424	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9216	False	NA	19	True	NA	NA	NA	110987882	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.31	chr5	+	659	4	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	18	25351	18	-1099	5prime_fragment	FALSE	canonical	3	120	junction_1	91.2249965744039	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTTTTCTTAACTTC	9217	False	NA	NA	False	AATAAA	-19	NA	110987883	110996660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495
ES.26705.32	chr5	+	2417	16	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	86.2784639022586	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9217	False	NA	19	True	NA	NA	NA	110987883	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019611_111019783_111019892_111019974_111021345
ES.26705.33	chr5	+	2523	4	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	20	-28	intron_retention	FALSE	canonical	3	57	junction_1	120.921462114879	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGTGTTGGGATAA	9219	False	NA	NA	False	AATAAA	-15	NA	110987885	110997731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110989410_110996254_110996380_110996495
ES.26705.34	chr5	+	2493	15	NIC	ENSMUSG00000029521.8	novel	634	4	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	55.8383234646863	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9462	False	NA	19	True	NA	NA	NA	110988128	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.35	chr5	+	3983	12	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-551	0	intron_retention	FALSE	canonical	3	192	junction_4	43.5123237031716	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	False	NA	19	True	NA	NA	NA	110988768	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111015960_111019892_111019974_111021345
ES.26705.36	chr5	+	3276	14	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-248	0	intron_retention	FALSE	canonical	1	1	junction_5	93.6519428016982	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	False	NA	19	True	NA	NA	NA	110989071	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111003936_111004044_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111015960_111019892_111019974_111021345
ES.26705.37	chr5	+	3178	1	NIC	ENSMUSG00000029521.8	novel	2190	14	NA	NA	-6681	-3953	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTTATGTATTCATTA	NA	False	NA	NA	False	NA	NA	NA	111007455	111010633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111007500_111010600
ES.26705.38	chr5	+	1488	6	NIC	ENSMUSG00000029521.8	novel	2190	14	NA	NA	-5748	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	88.4565430027649	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	False	NA	19	True	NA	NA	NA	111008388	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111019892_111019974_111021345
ES.26705.39	chr5	+	1509	9	NNC	ENSMUSG00000029521.8	novel	2190	14	NA	NA	-5408	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	92.7495788400142	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	False	NA	19	True	NA	NA	NA	111008728	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019623_111019783_111019892_111019974_111021345
ES.26705.4	chr5	+	1917	5	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-18	-28	intron_retention	FALSE	canonical	3	57	junction_1	123.00076219276	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGTGTTGGGATAA	9160	False	NA	NA	False	AATAAA	-15	NA	110987826	110997731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495
ES.26705.40	chr5	+	4084	5	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	-3013	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	106.550457530693	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	NA	False	NA	26	True	AAAACA	-2	NA	111011123	111022006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111011224_111013387_111013475_111014128_111014647_111014694_111015960_111019892
ES.26705.41	chr5	+	987	4	NIC	ENSMUSG00000029521.8	novel	2190	14	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	99.238209487184	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	False	NA	19	True	NA	NA	NA	111014126	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111014293_111015873_111015960_111019892_111019974_111021345
ES.26705.42	chr5	+	3700	2	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	29069	5	2798	-5	3prime_fragment	FALSE	canonical	3	239	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTAGTTTGTTGTGGC	NA	False	NA	26	True	AAAACA	-2	NA	111016934	111022006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_111019974_111021345
ES.26705.5	chr5	+	2296	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	-29	9	-8	3	multi-exon	FALSE	canonical	3	120	junction_1	48.9833895211386	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTAGTAGTTTGTTG	9170	False	NA	22	True	NA	NA	NA	110987836	111022002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.7	chr5	+	2270	15	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	70.3509061775326	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTAGTAGTTTGTTG	9183	False	NA	22	True	NA	NA	NA	110987849	111022002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989084_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ES.26705.8	chr5	+	6286	13	NNC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	4	0	intron_retention	FALSE	canonical	1	4	junction_6	98.7601963793556	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	9186	False	NA	19	True	NA	NA	NA	110987852	111021999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003002_111003112_111003590_111003700_111006239_111008791_111011123_111011224_111013387_111013475_111014128_111015960_111019892_111019974_111021345
ES.26705.9	chr5	+	943	5	ISM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	-13	24280	4	-28	5prime_fragment	FALSE	canonical	3	120	junction_1	80.3632378640881	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGTGTTGGGATAA	9186	False	NA	NA	False	AATAAA	-15	NA	110987852	110997731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461
ES.26706.1	chr5	-	4699	2	Antisense	novelGene_ENSMUSG00000029521.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTCCAGAAGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	111008644	111003407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_111005410_111005947
ES.26707.1	chr5	-	2213	2	Antisense	novelGene_ENSMUSG00000029521.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTTTCTTAAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	111019821	111014421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_111014469_111017655
ES.26708.1	chr5	+	7957	23	NNC	ENSMUSG00000033209.18	novel	405	3	NA	NA	-1063	-2621	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.37899758331867	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGCATTTTAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	111026605	111435024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111026683_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ES.26708.10	chr5	+	5950	1	Intergenic	novelGene_22268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTATGTTGTGCTGTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	111214881	111220831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111214900_111220800
ES.26708.11	chr5	+	4257	10	NNC	ENSMUSG00000033209.18	novel	10688	23	NA	NA	-124837	5876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.89393678789894	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTTGCATTTGTCAG	NA	False	NA	NA	False	NA	NA	NA	111248486	111392206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111391425
ES.26708.12	chr5	+	7422	19	NIC	ENSMUSG00000033209.18	novel	10688	23	NA	NA	-124765	-2629	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	3.93190495093789	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCCAGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	111248558	111435016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111430636_111430767_111431810_111431919_111432857
ES.26708.13	chr5	+	3926	1	NIC	ENSMUSG00000033209.18	novel	10780	24	NA	NA	-49596	-49628	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGCCATTGTCTTCCT	NA	False	NA	NA	False	AAAACA	-25	NA	111323727	111327653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111323700_111327700
ES.26708.14	chr5	+	3823	8	NIC	ENSMUSG00000033209.18	novel	10688	23	NA	NA	40875	-2510	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	3.28260722659316	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCATTTATAGCCATT	3801	False	NA	NA	False	NA	NA	NA	111424055	111435135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111430636_111430767_111431810_111431919_111432857
ES.26708.2	chr5	+	1897	3	NNC	ENSMUSG00000033209.18	novel	10780	24	NA	NA	-1053	428	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATGGCTATACAATG	NA	False	NA	NA	False	NA	NA	NA	111026615	111062610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111026695_111040697_111040977_111061071
ES.26708.3	chr5	+	8072	23	FSM	ENSMUSG00000033209.18	ENSMUST00000156290.9	10688	23	-14	2630	-14	-2629	multi-exon	FALSE	canonical	1	3	junction_2	5.32128891364483	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCCAGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	111027654	111435016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ES.26708.4	chr5	+	8327	22	NIC	ENSMUSG00000033209.18	novel	10688	23	NA	NA	4	-2332	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	5.51106905111593	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAACAGAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	111027672	111435313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111430636_111430767_111431810_111431919_111432857
ES.26708.5	chr5	+	726	3	NNC	ENSMUSG00000033209.18	novel	1557	3	NA	NA	5	29570	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	9.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATTGTGGCTTTTAGA	NA	False	NA	NA	False	AATAAA	-23	NA	111027673	111091752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111027855_111040697_111040977_111091486
ES.26708.6	chr5	+	8351	23	FSM	ENSMUSG00000033209.18	ENSMUST00000156290.9	10688	23	9	2328	9	-2327	multi-exon	FALSE	canonical	1	3	junction_2	5.32128891364483	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAGAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	111027677	111435318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ES.26708.7	chr5	+	2083	7	NNC	ENSMUSG00000033209.18	novel	10688	23	NA	NA	62	-13944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.29157324317757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTGATGTGTCTTA	NA	False	NA	NA	False	AATAAA	-32	NA	111027749	111363337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111362698
ES.26708.8	chr5	+	4966	1	Intergenic	novelGene_22266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATAGATGATTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	111086778	111091744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111086800_111091700
ES.26708.9	chr5	+	7838	21	Fusion	ENSMUSG00000033209.18_ENSMUSG00000105112.2	novel	405	3	NA	NA	487	-2614	multi-exon	FALSE	canonical	0	0	junction_1	4.3692104549907	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGAACTATGCAATTG	2924	False	NA	NA	False	NA	NA	NA	111127017	111435031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_111127272_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111430636_111430767_111431810_111431919_111432857
ES.26709.1	chr5	-	128	1	Intergenic	novelGene_22265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	111041785	111041657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_111041700_111041800
ES.2671.1	chr10	-	1742	11	NNC	ENSMUSG00000075225.16	novel	2742	18	NA	NA	-5290	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.8	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTTCAAAGCTCCT	8277	False	NA	NA	False	AATAAA	-10	NA	41441962	41414844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41415301_41415416_41415539_41417769_41417898_41422878_41423000_41426717_41426928_41428313_41428467_41429068_41429204_41429411_41429565_41431968_41432137_41432760_41432815_41441920
ES.2671.10	chr10	-	175	1	Antisense	novelGene_ENSMUSG00000093298.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACGAAAATTTAAAATCC	NA	False	NA	NA	False	NA	NA	NA	41546753	41546578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_41546600_41546800
ES.2671.2	chr10	-	2040	12	NNC	ENSMUSG00000075225.16	novel	2742	18	NA	NA	-5275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.77533409499523	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATTTCAAAGCTCCT	8292	False	NA	NA	False	AATAAA	-10	NA	41441947	41414844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41415301_41415416_41415539_41417769_41417898_41422878_41423000_41426717_41426928_41428313_41428467_41429068_41429204_41429411_41429565_41431968_41432137_41432760_41432815_41437106_41437420_41441920
ES.2671.3	chr10	-	4623	18	NNC	ENSMUSG00000075225.16	novel	7260	48	NA	NA	-316	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.76783302494555	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGACACATGTCCCTT	1225	False	NA	NA	False	ATTAAA	-24	NA	41489149	41424927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41426928_41428313_41428467_41429068_41429204_41429411_41429565_41431968_41432137_41432760_41432815_41437106_41437257_41445838_41445949_41455110_41455232_41456220_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567_41482686_41488765
ES.2671.4	chr10	-	3378	17	NNC	ENSMUSG00000075225.16	novel	7260	48	NA	NA	-336	561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.85043856274784	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGAGAGAGGTTGAGC	1205	False	NA	NA	False	AATAAA	-38	NA	41489169	41426042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41426928_41428313_41428467_41429068_41429204_41429411_41429565_41431968_41432137_41432760_41432815_41445838_41445949_41455110_41455232_41456220_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567_41482686_41488765
ES.2671.5	chr10	-	3288	18	NNC	ENSMUSG00000075225.16	novel	7260	48	NA	NA	-339	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.57214248342064	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCATGTATGGATTAATT	1202	False	NA	NA	False	AATAGA	-14	NA	41489172	41426300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41426928_41428313_41428467_41429068_41429204_41429399_41429565_41431968_41432137_41432760_41432815_41437106_41437257_41445838_41445949_41455110_41455232_41456220_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567_41482689_41488765
ES.2671.6	chr10	-	2743	16	NIC	ENSMUSG00000075225.16	novel	7260	48	NA	NA	4557	242	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	2.78567765543682	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTTCAGACATAATTT	7616	False	NA	NA	False	NA	NA	NA	41482758	41426361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41426928_41428313_41428467_41429411_41429565_41431968_41432137_41432760_41432815_41437106_41437257_41445838_41445949_41455110_41455232_41456220_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567
ES.2671.7	chr10	-	4716	31	NIC	ENSMUSG00000075225.16	novel	7260	48	NA	NA	3801	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	2.39095517872391	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGCTCTCTTCAGTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	41566682	41456218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41456360_41457154_41457388_41462247_41462401_41463345_41463442_41465555_41465707_41474412_41474552_41481046_41481213_41482567_41482689_41488765_41488943_41489288_41489339_41490776_41490889_41491828_41491981_41500577_41500672_41503141_41503298_41505945_41506149_41509963_41510193_41512106_41512229_41513087_41513289_41520566_41520695_41522952_41523146_41530937_41531142_41531441_41531575_41532242_41532329_41539022_41539185_41542690_41542793_41549801_41549955_41556211_41556351_41557593_41557789_41559162_41559277_41566020_41566132_41566382
ES.2671.8	chr10	-	173	1	Intergenic	novelGene_2033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATTGGAAAATACC	7045	False	NA	NA	False	NA	NA	NA	41470533	41470360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41470400_41470500
ES.2671.9	chr10	-	4353	4	ISM	ENSMUSG00000075225.16	ENSMUST00000189488.3	7260	48	103495	56011	-302	-14635	internal_fragment	FALSE	canonical	2	3	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAACATTATTCTTGTCT	1239	False	NA	NA	False	AATAAA	-14	NA	41489135	41470855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_41474552_41481046_41481213_41482567_41482689_41488765
ES.26710.1	chr5	-	6981	1	Antisense	novelGene_ENSMUSG00000033209.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	111066237	111059256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_111059300_111066200
ES.26711.1	chr5	-	340	1	Intergenic	novelGene_22267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCACTTTCCTGTGAA	NA	False	NA	NA	False	ATTAAA	-15	NA	111211815	111211475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_111211500_111211800
ES.26712.1	chr5	-	176	1	Intergenic	novelGene_22269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGGTAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	111258443	111258267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_111258300_111258400
ES.26713.1	chr5	-	1029	1	Intergenic	novelGene_22270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGGAGGGAAACC	NA	False	NA	NA	False	NA	NA	NA	111375076	111374047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_111374000_111375100
ES.26714.1	chr5	-	2846	1	Intergenic	novelGene_22271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111462285	111459439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_111459400_111462300
ES.26715.1	chr5	+	2856	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-93	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478535	111536227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.11	chr5	+	2523	8	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	474.345263043101	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTGCTCCTGTG	NA	False	NA	14	True	AATAAA	-15	NA	111478620	111536223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ES.26715.12	chr5	+	1820	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-6	-916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	418.512138414168	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAAGCAAACGGCGATC	NA	False	NA	16	True	AATAAA	-22	NA	111478622	111535309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.13	chr5	+	2683	10	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	432.941361182115	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478622	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ES.26715.16	chr5	+	1742	13	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	438.299071854925	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	False	NA	9	True	AATAAA	-10	NA	111478624	111536218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368_111534911_111535414_111535548_111536059
ES.26715.17	chr5	+	2753	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	435.84582164673	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACCTGTGTGCTCCTGT	NA	False	NA	13	True	AATAAA	-14	NA	111478624	111536222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478704_111486130_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.19	chr5	+	5782	6	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_3	476.209449717244	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478626	111536227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111519177_111519256_111528057_111528169_111530853
ES.26715.2	chr5	+	2857	12	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	361.007131176561	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478577	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494940_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.20	chr5	+	661	1	Genic_Genomic	ENSMUSG00000050017.12	novel	NA	NA	NA	NA	-1	-51691	mono-exon	FALSE	NA	NA	NA	NA	NA	636	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111478627	111479288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_111478600_111479300
ES.26715.21	chr5	+	1643	9	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-1	-929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	454.810881026389	729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCAGACTCTGGCTAA	NA	False	NA	3	True	AATAAA	-9	NA	111478627	111535296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111494348_111494449_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.22	chr5	+	4866	12	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	450.789866936061	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTGCTCCTGTG	NA	False	NA	14	True	AATAAA	-15	NA	111478627	111536223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111516479_111518586_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.23	chr5	+	2741	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	425.675933075855	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478627	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533449_111534368
ES.26715.24	chr5	+	1746	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	-931	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	458.153540493432	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATTCAGACTCTGGCT	NA	False	NA	1	True	AATAAA	-7	NA	111478628	111535294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530852_111530977_111534368
ES.26715.25	chr5	+	2592	9	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	481.323955356473	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478629	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ES.26715.26	chr5	+	2576	9	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	443.25583399996	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTCCACCTGTGTGC	NA	False	NA	7	True	AATAAA	-8	NA	111478629	111536216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530851_111530977_111533385_111533471_111534368
ES.26715.29	chr5	+	2754	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	375.1786774325	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478629	111536227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.3	chr5	+	2554	8	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-51	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	339.334522805074	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478577	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.30	chr5	+	2729	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	418.512138414168	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478630	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.31	chr5	+	2823	12	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	415.229200871276	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478631	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111491256_111491322_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.34	chr5	+	2913	12	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	415.229200871276	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	False	NA	18	True	AATAAA	-19	NA	111478631	111536227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111490892_111491046_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.36	chr5	+	2743	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	433.538413010376	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478637	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478727_111486148_111486293_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528060_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.37	chr5	+	6709	9	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_3	315.826594035398	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTGTGTGCTCCTGTG	NA	False	NA	14	True	AATAAA	-15	NA	111478638	111536223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494985_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853
ES.26715.38	chr5	+	8772	9	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	409.029033199356	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478639	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494955_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057
ES.26715.39	chr5	+	2609	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	429.482663241127	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478639	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486179_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111530853_111530977_111533385_111533471_111534368
ES.26715.4	chr5	+	1886	11	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-42	-917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	374.982999614649	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTAAGCAAACGGCGAT	NA	False	NA	15	True	AATAAA	-21	NA	111478586	111535308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.41	chr5	+	2552	9	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	438.635366078705	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478649	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111497350_111497441_111519177_111519256_111530853_111530977_111533385_111533471_111534368
ES.26715.43	chr5	+	2579	9	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	414.862552539995	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478651	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.44	chr5	+	2548	9	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	462.825814291943	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	False	NA	9	True	AATAAA	-10	NA	111478653	111536218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533449_111534368
ES.26715.45	chr5	+	2723	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	436.000254841923	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	False	NA	9	True	AATAAA	-10	NA	111478655	111536218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478727_111486148_111486295_111494348_111494441_111495638_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.46	chr5	+	2657	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	435.691305376005	736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478671	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111486179_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.47	chr5	+	7501	8	NNC	ENSMUSG00000050017.12	novel	485	6	NA	NA	-5618	-7	intron_retention	FALSE	canonical	0	0	junction_1	417.572870336204	732	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	False	NA	9	True	AATAAA	-10	NA	111488735	111536218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111491046_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111530977_111533385_111533471_111534368
ES.26715.48	chr5	+	6111	4	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	45494	0	-3912	0	3prime_fragment	FALSE	canonical	3	814	junction_2	60.3894766402963	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111524122	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_111528169_111530853_111530977_111533385_111533471_111534368
ES.26715.49	chr5	+	4181	2	ISM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	49980	0	618	0	3prime_fragment	FALSE	canonical	3	78	junction_1	0	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111528652	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_111530977_111534368
ES.26715.5	chr5	+	5211	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-40	1	intron_retention	FALSE	canonical	0	0	junction_3	394.278525354293	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478588	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111533471_111534368
ES.26715.50	chr5	+	2862	2	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	52326	0	2920	0	intron_retention	FALSE	canonical	3	814	junction_1	0	732	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111530954	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_111530977_111533385
ES.26715.6	chr5	+	6101	9	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-32	1	intron_retention	FALSE	canonical	0	0	junction_3	410.027361891862	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGCTCCTGTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	111478596	111536226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853
ES.26715.7	chr5	+	1849	10	NNC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	-21	-962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	457.652221184991	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGGTTTGTGATTTATA	NA	False	NA	-30	True	AAAACA	-4	NA	111478607	111535263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478708_111483916_111484054_111486148_111486295_111494348_111494449_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ES.26715.9	chr5	+	2692	10	NNC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	449.183951429948	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478613	111536225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494449_111495646_111495722_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ES.26716.1	chr5	+	6992	2	FSM	ENSMUSG00000070576.5	ENSMUST00000094463.5	6860	2	-142	10	-62	-10	multi-exon	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCATGTTTGTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	111565165	111604889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_111569750_111602481
ES.26717.1	chr5	-	1273	1	Antisense	novelGene_ENSMUSG00000070576.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111604020	111602747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_111602700_111604000
ES.26718.1	chr5	+	2568	1	Intergenic	novelGene_22272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATTGTGGTAGGGTG	NA	False	NA	NA	False	AATAAA	-41	NA	111605666	111608234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111605700_111608200
ES.26719.1	chr5	+	8591	1	Genic_Genomic	ENSMUSG00000085919.2	novel	NA	NA	NA	NA	5209	8472	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAATGACCTCTATA	NA	False	NA	NA	False	NA	NA	NA	111895923	111904514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_111895900_111904500
ES.2672.1	chr10	+	180	1	Intergenic	novelGene_2036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATTTCCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	41573792	41573972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41573800_41574000
ES.26720.1	chr5	-	1776	6	NNC	ENSMUSG00000085271.8	novel	906	5	NA	NA	-10	603	intron_retention	FALSE	canonical	0	0	junction_4	4.02988833592198	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCATTTTTTCCTCATG	NA	False	NA	NA	False	AATAGA	-11	NA	111909579	111881546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_111882676_111882787_111883050_111886992_111887080_111887701_111887776_111895712_111895859_111909501
ES.26720.2	chr5	-	715	5	FSM	ENSMUSG00000085271.8	ENSMUST00000129065.8	729	5	33	-19	8	0	multi-exon	FALSE	canonical	2	4	junction_1	2.54950975679639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCAAAATACTGGAGC	NA	False	NA	NA	False	AATAAA	-31	NA	111909558	111882149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_111882496_111886992_111887080_111887701_111887776_111895707_111895859_111909501
ES.26721.1	chr5	+	3550	3	Intergenic	novelGene_22274	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATGAAGGAAATTAATTG	NA	False	NA	NA	False	NA	NA	NA	111913696	111919652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111913843_111915881_111916027_111916393
ES.26721.2	chr5	+	3296	2	Intergenic	novelGene_22273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111913696	111919607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111913843_111916457
ES.26721.3	chr5	+	5875	1	Intergenic	novelGene_22275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAGGGATGAAGGA	NA	False	NA	NA	False	NA	NA	NA	111913768	111919643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_111913800_111919600
ES.26722.1	chr5	+	4264	1	Genic_Genomic	ENSMUSG00000105376.5	novel	NA	NA	NA	NA	-69	-8025	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGCTTCAATCTACTG	NA	False	NA	NA	False	NA	NA	NA	111941183	111945447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_111941200_111945400
ES.26723.1	chr5	+	3058	1	Genic_Genomic	ENSMUSG00000105376.5	novel	NA	NA	NA	NA	10858	1613	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGAGTTTTAGTGAG	NA	False	NA	NA	False	NA	NA	NA	111952110	111955168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_111952100_111955200
ES.26724.1	chr5	-	1174	2	Antisense	novelGene_ENSMUSG00000105376.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGCTCTTGTAGGATAT	NA	False	NA	NA	False	NA	NA	NA	111953745	111949420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_111950370_111953520
ES.26725.1	chr5	+	1864	1	Intergenic	novelGene_22276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGCATTCTGCATGCA	NA	False	NA	NA	False	NA	NA	NA	112001397	112003261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_112001400_112003300
ES.26726.1	chr5	+	162	1	Intergenic	novelGene_22277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3351	False	NA	NA	False	NA	NA	NA	112210140	112210302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_112210100_112210300
ES.26727.1	chr5	+	174	1	Intergenic	novelGene_22278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	112303207	112303381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_112303200_112303400
ES.26727.2	chr5	+	275	1	Intergenic	novelGene_22279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTTGAGTTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	112303208	112303483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_112303200_112303500
ES.26728.1	chr5	+	1841	7	FSM	ENSMUSG00000029344.16	ENSMUST00000031287.12	1835	7	-10	4	-10	2	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	NA	False	NA	23	True	AATAAA	-33	NA	112424546	112463223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.10	chr5	+	6203	1	Intergenic	novelGene_22281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTCAACAAACAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	112444738	112450941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_112444700_112450900
ES.26728.11	chr5	+	3804	6	ISM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	25137	0	-2052	0	3prime_fragment	FALSE	canonical	3	300	junction_2	15.9323570133235	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	300	False	NA	21	True	AATAAA	-31	NA	112449709	112463221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.12	chr5	+	2872	5	NIC	ENSMUSG00000029344.16	novel	1741	6	NA	NA	-1842	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	147.379399849504	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	4905	False	NA	23	True	AATAAA	-33	NA	112454314	112463223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.13	chr5	+	1822	2	FSM	ENSMUSG00000029344.16	ENSMUST00000139482.2	471	2	-962	-389	-962	-2	multi-exon	FALSE	canonical	3	340	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACGAGTGAGTAGCTTT	NA	False	NA	19	True	AATAAA	-29	NA	112459797	112463219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112461157_112462756
ES.26728.2	chr5	+	1912	7	NIC	ENSMUSG00000029344.16	novel	1813	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424550	112463221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.3	chr5	+	823	5	NIC	ENSMUSG00000029344.16	novel	1741	6	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	146.513437950244	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424578	112463221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112424638_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.4	chr5	+	1765	7	NNC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	125.083638684948	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	NA	False	NA	23	True	AATAAA	-33	NA	112424609	112463223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457741_112459549_112459601_112461107_112461157_112462756
ES.26728.5	chr5	+	864	6	NIC	ENSMUSG00000029344.16	novel	1835	7	NA	NA	39	2	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGAGTAGCTTTCTTC	NA	False	NA	23	True	AATAAA	-33	NA	112424611	112463223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.6	chr5	+	1853	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112436573	112463221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.7	chr5	+	926	6	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	128.790372310977	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112436588	112463221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112436679_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.8	chr5	+	3050	6	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	-39	1	intron_retention	FALSE	canonical	3	101	junction_1	95.422010039613	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	False	NA	22	True	AATAAA	-32	NA	112436588	112463222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112436679_112451765_112451838_112455431_112457754_112459549_112459601_112461107_112461157_112462756
ES.26728.9	chr5	+	2000	8	NNC	ENSMUSG00000029344.16	novel	442	5	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	150.243340033726	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACACGAGTGAGTAGC	NA	False	NA	16	True	AATAAA	-26	NA	112436629	112463216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462030_112462239_112462756
ES.26729.1	chr5	-	160	1	Intergenic	novelGene_22280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	112434169	112434009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_112434000_112434200
ES.2673.1	chr10	-	2782	2	Intergenic	novelGene_2037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	41590888	41587894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41588440_41588651
ES.2673.2	chr10	-	3941	2	Intergenic	novelGene_2038	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	41592076	41587923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41588429_41588640
ES.26730.1	chr5	+	3570	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	1	-11	1	11	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTGTTTGCTTTCTTTT	NA	False	NA	25	True	AATAAA	-27	NA	112474224	112485950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.10	chr5	+	4127	12	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-19	10	intron_retention	FALSE	canonical	3	96	junction_1	14.7614642378824	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTGTTTGCTTTCTTT	NA	False	NA	24	True	AATAAA	-26	NA	112474267	112485949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.11	chr5	+	4163	13	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-15	-22	intron_retention	TRUE	non_canonical	0	0	junction_8	35.9741419479171	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAACATACATACAC	NA	False	NA	-8	True	NA	NA	NA	112474271	112485917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481722_112481766_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.12	chr5	+	3879	13	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	92	junction_4	15.9704588398567	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGGAAGTATATGGGTG	NA	False	NA	12	True	AATAAA	-14	NA	112474276	112485937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.13	chr5	+	5071	12	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-10	3	intron_retention	FALSE	canonical	3	92	junction_4	16.2221152995961	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTATATGGGTGTTTGC	NA	False	NA	17	True	AATAAA	-19	NA	112474276	112485942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.14	chr5	+	3371	13	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-10	7	intron_retention	FALSE	canonical	0	0	junction_11	34.1470472125092	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATGGGTGTTTGCTTTC	NA	False	NA	21	True	AATAAA	-23	NA	112474276	112485946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483880_112484047_112484851
ES.26730.15	chr5	+	5968	11	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	37.9843388780166	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	112474285	112485939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481723_112481766_112482352_112482725_112483582_112483880_112484047_112484851
ES.26730.17	chr5	+	2100	7	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-2339	2	intron_retention	FALSE	canonical	0	0	junction_1	47.6118565998942	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTATATGGGTGTTTG	4792	False	NA	16	True	AATAAA	-18	NA	112481168	112485941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112481358_112481448_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.2	chr5	+	2874	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	1	685	1	115	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAATAACGTCTCTA	NA	False	NA	25	True	AATAAA	-17	NA	112474224	112485254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.3	chr5	+	4808	12	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	23	7	intron_retention	TRUE	non_canonical	0	0	junction_9	36.8003323736338	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATGGGTGTTTGCTTTC	NA	False	NA	21	True	AATAAA	-23	NA	112474246	112485946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481723_112481766_112482970_112483438_112484047_112484851
ES.26730.4	chr5	+	3746	12	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	30	115	intron_retention	TRUE	non_canonical	0	0	junction_7	37.2272449772346	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAATAACGTCTCTA	NA	False	NA	25	True	AATAAA	-17	NA	112474253	112485254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477770_112478956_112479085_112479733_112479887_112480829_112481716_112481759_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.6	chr5	+	4115	14	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-29	0	intron_retention	TRUE	non_canonical	0	0	junction_9	34.6428950510028	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	112474257	112485939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481694_112481739_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.7	chr5	+	3731	13	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-29	-22	intron_retention	FALSE	canonical	3	96	junction_1	14.1742626694379	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAACATACATACAC	NA	False	NA	-8	True	NA	NA	NA	112474257	112485917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.8	chr5	+	4113	14	NNC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-29	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	34.6428950510028	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTAGGAAGTATATGGG	NA	False	NA	10	True	AATAAA	-12	NA	112474257	112485935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481723_112481766_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ES.26730.9	chr5	+	5083	12	NIC	ENSMUSG00000029345.14	novel	3560	14	NA	NA	-29	0	intron_retention	FALSE	canonical	3	92	junction_3	15.7254334184577	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	112474257	112485939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112474340_112475350_112475537_112475827_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482970_112483438_112483582_112483880_112484047_112484851
ES.26731.1	chr5	+	3000	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	-165	1	-153	-1	multi-exon	TRUE	canonical	3	24	junction_1	21.6682900317355	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490795	112526279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.10	chr5	+	3626	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.7453300836086	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGAGTGATCAGCT	NA	False	NA	5	True	AATAAA	-11	NA	112490965	112526276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.11	chr5	+	3337	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	29.7046606428238	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGAGTGATCAGCT	NA	False	NA	5	True	AATAAA	-11	NA	112490980	112526276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511383_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.12	chr5	+	5111	13	NNC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	16	-3	intron_retention	TRUE	non_canonical	0	0	junction_8	32.0887441324836	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTGAGTGATCAGCTA	NA	False	NA	6	True	AATAAA	-12	NA	112490981	112526277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112515107_112515165_112516839_112517320_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.13	chr5	+	3312	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	26	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.3606198318485	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGTTCTGAGTGATC	NA	False	NA	1	True	AATAAA	-7	NA	112490991	112526272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511389_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517815_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.14	chr5	+	3195	13	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	26	-4	intron_retention	FALSE	canonical	3	24	junction_1	21.5767364435763	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGAGTGATCAGCT	NA	False	NA	5	True	AATAAA	-11	NA	112490991	112526276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.15	chr5	+	3203	13	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	26	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	30.731362915866	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112490991	112526278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.16	chr5	+	3640	13	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	26	-2	intron_retention	FALSE	canonical	3	34	junction_1	19.9476746068864	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112490991	112526278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112523328_112525824
ES.26731.17	chr5	+	3636	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.8111961069698	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTGAGTGATCAGCTA	NA	False	NA	6	True	AATAAA	-12	NA	112490991	112526277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491367_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.18	chr5	+	3143	13	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	27	-1	intron_retention	FALSE	canonical	3	24	junction_1	22.088678598373	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490992	112526279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112523328_112525824
ES.26731.2	chr5	+	2970	14	NNC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.1214456395943	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTGAGTGATCAGCTA	NA	False	NA	6	True	AATAAA	-12	NA	112490915	112526277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517228_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.20	chr5	+	3617	12	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	34	-2	intron_retention	FALSE	canonical	3	24	junction_1	23.0665583844335	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112490999	112526278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112517418_112517811_112518611_112522745_112523328_112525824
ES.26731.21	chr5	+	4458	1	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	-1380	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112521820	112526278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112521800_112526300
ES.26731.3	chr5	+	3613	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	26.5788989580548	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGTGATCAGCTAG	NA	False	NA	7	True	AATAAA	-13	NA	112490939	112526278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112490989_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.4	chr5	+	3302	14	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.6563543924319	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490949	112526279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112490989_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.6	chr5	+	3351	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	3	-9	3	9	multi-exon	FALSE	canonical	3	34	junction_1	19.6098031274724	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTAGCATTTATTTCT	NA	False	NA	18	True	AATAAA	-24	NA	112490951	112526289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.7	chr5	+	3717	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	26.3472487139151	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAGTGATCAGCTAGC	NA	False	NA	8	True	AATAAA	-14	NA	112490951	112526279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112491533_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.8	chr5	+	2799	14	NIC	ENSMUSG00000042328.14	novel	2836	14	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.5195248851138	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTGAGTGATCAGC	NA	False	NA	4	True	AATAAA	-10	NA	112490951	112526275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_112490989_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26731.9	chr5	+	2941	15	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.8437026692737	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGTTCTGAGTGATC	NA	False	NA	1	True	AATAAA	-7	NA	112490961	112526272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112491030_112491909_112492024_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ES.26732.1	chr5	-	1076	7	FSM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-6	-6	-6	6	multi-exon	FALSE	canonical	3	101	junction_3	14.8884742894182	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACAGTGCTGTTTATTC	NA	False	NA	-1	True	AATAGA	-20	NA	112490892	112485251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26732.10	chr5	-	2258	5	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	22	junction_1	53.8168189323747	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490908	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485608_112485841_112485914_112486183_112486434_112487584_112489003_112490740
ES.26732.11	chr5	-	4152	4	ISM	ENSMUSG00000029346.13	ENSMUST00000156083.8	837	6	-25	-580	-3	0	intron_retention	FALSE	canonical	3	38	junction_2	46.0506967012082	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490909	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112485914_112486183_112486434_112487584_112487684_112487762
ES.26732.12	chr5	-	3913	2	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	135	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490908	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112489003_112490740
ES.26732.13	chr5	-	1107	7	NNC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.1378654866315	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490908	112485259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112485608_112485867_112485914_112486183_112486362_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26732.14	chr5	-	5368	2	ISM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-1	2	-1	-2	intron_retention	FALSE	canonical	3	113	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490887	112485259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112485608_112485867
ES.26732.15	chr5	-	1490	7	NNC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.9174474667952	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490889	112485259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489428_112490740
ES.26732.16	chr5	-	3975	4	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	22	junction_1	51.7966107857347	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490889	112485259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485608_112485841_112485914_112486183_112486434_112487584
ES.26732.17	chr5	-	3642	3	NIC	ENSMUSG00000029346.13	novel	837	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	135	junction_2	2	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGGTTTACAGTGCT	NA	False	NA	-9	True	AATAGA	-12	NA	112490909	112485259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485914_112486183_112489003_112490740
ES.26732.18	chr5	-	3854	1	Genic_Genomic	ENSMUSG00000029346.13	novel	NA	NA	NA	NA	-2	530	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAACAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	112490908	112487054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_112487100_112490900
ES.26732.2	chr5	-	3886	5	FSM	ENSMUSG00000029346.13	ENSMUST00000155756.8	871	5	-3014	-1	4	1	multi-exon	FALSE	canonical	3	38	junction_3	40.1154583670684	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490902	112485256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762
ES.26732.3	chr5	-	2827	6	ISM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	-24	-1	-4	1	intron_retention	FALSE	canonical	3	101	junction_3	15.8316139417306	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTTACAGTGCTGTT	NA	False	NA	-6	True	AATAGA	-15	NA	112490910	112485256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961
ES.26732.4	chr5	-	4352	1	NIC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	1275	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112489609	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485300_112489600
ES.26732.5	chr5	-	1113	7	FSM	ENSMUSG00000029346.13	ENSMUST00000031289.7	1110	7	-3	0	-3	0	multi-exon	FALSE	canonical	3	22	junction_1	42.3848112207926	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490909	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_112485608_112485841_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26732.6	chr5	-	1188	7	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.7466473988403	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490889	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485608_112485841_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26732.7	chr5	-	1329	6	NIC	ENSMUSG00000029346.13	novel	1110	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	101	junction_2	14.7972970504751	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490891	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26732.8	chr5	-	3970	4	ISM	ENSMUSG00000029346.13	ENSMUST00000155756.8	871	5	-3020	0	-2	0	intron_retention	FALSE	canonical	3	38	junction_3	42.8200368467328	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490908	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584
ES.26732.9	chr5	-	1182	7	NIC	ENSMUSG00000029346.13	novel	1064	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	36.3168923046379	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490909	112485257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ES.26733.1	chr5	-	3021	4	NIC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	15	-1	intron_retention	FALSE	canonical	3	15	junction_3	6.0184900284226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCATCCTAAATTTCT	NA	False	NA	-2	True	AATAGA	-27	NA	112542717	112533310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112533728_112534624_112534739_112539023_112540122_112541325
ES.26733.2	chr5	-	4626	3	FSM	ENSMUSG00000029348.12	ENSMUST00000031291.9	2678	3	-3042	1094	-389	-4	multi-exon	FALSE	canonical	3	26	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAATCATCCTAAATT	NA	False	NA	-5	True	AATAGA	-24	NA	112543121	112533313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_112533728_112534624_112534739_112539023
ES.26733.3	chr5	-	2104	6	NNC	ENSMUSG00000029348.12	novel	808	4	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	10.6320270880016	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAATCATCCTAAATT	NA	False	NA	-5	True	AATAGA	-24	NA	112542722	112533313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112533728_112534624_112534739_112539023_112540122_112541325_112541450_112541650_112541866_112542583
ES.26733.4	chr5	-	2025	6	NNC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	26	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9096599447675	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTCTAAATGTAATC	NA	False	NA	-15	True	AATAGA	-14	NA	112542706	112533323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112533728_112534624_112534739_112539023_112540122_112541325_112541397_112541650_112541866_112542583
ES.26733.5	chr5	-	1701	4	NNC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	-1068	-16	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_3	11.1455023315337	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTTGTCTAAATGTAA	NA	False	NA	-17	True	AATAGA	-12	NA	112543800	112533325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112533728_112534624_112534739_112539023_112540122_112543713
ES.26734.1	chr5	-	4741	1	NIC	ENSMUSG00000058153.16	novel	5857	17	NA	NA	51231	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGCCTGGATGTGGGT	6153	False	NA	NA	False	AATAAA	-13	NA	112571762	112567021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_112567000_112571800
ES.26734.2	chr5	-	3093	2	NNC	ENSMUSG00000058153.16	novel	4998	15	NA	NA	52802	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCCTGGATGTGGG	7724	False	NA	NA	False	AATAAA	-12	NA	112570191	112567022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112569905_112569980
ES.26734.3	chr5	-	2837	16	ISM	ENSMUSG00000058153.16	ENSMUST00000079491.14	5857	17	101849	2356	1	306	3prime_fragment	FALSE	canonical	0	0	junction_2	1.07496769977314	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTACCCCATCTTCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	112622992	112569372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112569905_112572488_112572592_112573479_112573592_112574591_112574625_112576241_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ES.26734.4	chr5	-	1578	9	NNC	ENSMUSG00000058153.16	novel	5857	17	NA	NA	26225	288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.21834929310112	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTCCTCTAAAAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	112596768	112569390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112569905_112572488_112572592_112573479_112573595_112574591_112574625_112576241_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112596734
ES.26735.1	chr5	+	3417	4	Genic_Genomic	ENSMUSG00000105735.2	novel	1301	1	NA	NA	-2958	8	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCCGGGTTCCGGTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	112785242	112789509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_112785564_112785753_112785898_112786523_112788707_112788740
ES.26735.2	chr5	+	460	3	NNC	ENSMUSG00000104807.2	novel	613	3	NA	NA	-37427	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGTCAAGGTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	112785813	112828453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112785898_112824588_112824815_112828303
ES.26735.3	chr5	+	752	3	NNC	ENSMUSG00000104807.2	novel	613	3	NA	NA	-31356	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTCAAGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	112791884	112828452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_112792262_112824588_112824815_112828303
ES.26736.1	chr5	-	185	1	Intergenic	novelGene_22282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGAATGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	112807106	112806921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_112806900_112807100
ES.26737.1	chr5	-	5440	33	NNC	ENSMUSG00000072720.10	novel	8280	44	NA	NA	22882	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	1.98800111607112	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTGGTTTCTCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	112996570	112836741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112836964_112839961_112841202_112863246_112863385_112864852_112864898_112871672_112871804_112905320_112905507_112908181_112908320_112909189_112909274_112910522_112910640_112912313_112912428_112923118_112923272_112930450_112930556_112933422_112933534_112937855_112938057_112938942_112939067_112943260_112943416_112946682_112946808_112950231_112950341_112951054_112951175_112957527_112957618_112959451_112959596_112959851_112959981_112965495_112965562_112975842_112975953_112978025_112978246_112978936_112979121_112982240_112982401_112985616_112985768_112987482_112987564_112988485_112988679_112991069_112991161_112994136_112994311_112996541
ES.26737.2	chr5	-	5501	33	NNC	ENSMUSG00000072720.10	novel	8280	44	NA	NA	23114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1.98800111607112	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGTGTGGTTTCTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	112996338	112836743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_112836964_112839961_112841202_112863246_112863385_112864852_112864898_112871672_112871804_112905320_112905507_112908181_112908320_112909189_112909274_112910522_112910640_112912313_112912428_112923118_112923272_112930450_112930556_112933422_112933534_112937855_112938057_112938942_112939067_112943260_112943416_112946682_112946808_112950231_112950341_112951054_112951175_112957527_112957618_112959451_112959596_112959851_112959981_112965495_112965562_112975842_112975953_112978025_112978246_112978936_112979121_112982240_112982401_112985616_112985768_112987482_112987564_112988485_112988679_112991069_112991161_112994136_112994311_112996246
ES.26737.3	chr5	-	2743	17	ISM	ENSMUSG00000072720.10	ENSMUST00000183029.8	5690	29	25279	21931	25279	-21931	internal_fragment	FALSE	canonical	0	0	junction_1	1.01357967126418	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGAGTCCTCACCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	112994173	112942682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_112943416_112946682_112946808_112950231_112950341_112951054_112951175_112957527_112957618_112959451_112959596_112959851_112959981_112965495_112965562_112975842_112975953_112978025_112978246_112978936_112979121_112982240_112982401_112985616_112985768_112987482_112987564_112988485_112988679_112991069_112991161_112994136
ES.26738.1	chr5	-	6866	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-329	-4	-52	4	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGCTGACATCTCAT	210	False	NA	0	True	AATAAA	-22	NA	113163709	113058343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.10	chr5	-	6681	22	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.713520737327	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	516	False	NA	-6	True	AATAAA	-16	NA	113163403	113058349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113084257_113084385_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.11	chr5	-	6738	22	NNC	ENSMUSG00000042249.12	novel	4455	21	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.0563366233111	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	516	False	NA	-6	True	AATAAA	-16	NA	113163403	113058349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113073466_113073612_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
ES.26738.12	chr5	-	6365	22	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.6632649961753	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	510	False	NA	-6	True	AATAAA	-16	NA	113163409	113058349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113059665_113059859_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.14	chr5	-	6475	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	19.6148510642184	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	516	False	NA	-8	True	AATAAA	-14	NA	113163403	113058351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113163232
ES.26738.15	chr5	-	6477	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	17.6749662554972	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	516	False	NA	-8	True	AATAAA	-14	NA	113163403	113058351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.16	chr5	-	5791	13	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-31543	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.6770813731024	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	NA	False	NA	-8	True	AATAAA	-14	NA	113105207	113058351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180
ES.26738.17	chr5	-	6498	20	NIC	ENSMUSG00000042249.12	novel	4455	21	NA	NA	-38	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_17	23.4342363840396	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTGGCTTGAGGCTGA	501	False	NA	-8	True	AATAAA	-14	NA	113163418	113058351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
ES.26738.18	chr5	-	6266	18	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	19.0062819700556	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGTGGCTTGAGGCT	549	False	NA	-10	True	AATAAA	-12	NA	113163370	113058353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113133630_113133708_113163232
ES.26738.19	chr5	-	6332	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-24	225	-24	-225	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGATCTGGCTTCTTCT	515	False	NA	NA	False	ATTAAA	-26	NA	113163404	113058572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.2	chr5	-	10072	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-68	1	intron_retention	FALSE	canonical	3	54	junction_6	10.5890237426646	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGAGGCTGACATCT	194	False	NA	-3	True	AATAAA	-19	NA	113163725	113058346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.20	chr5	-	5578	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	1	954	1	-954	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGTTCAAGGCCTCT	540	False	NA	NA	False	NA	NA	NA	113163379	113059301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.21	chr5	-	4416	21	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	18.0695877097404	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTATTATTTATTTT	528	False	NA	-8	True	ATTAAA	-18	NA	113163391	113060463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114841_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.22	chr5	-	4737	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-320	2116	-43	1	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTATTATTTATTTT	219	False	NA	-8	True	ATTAAA	-18	NA	113163700	113060463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.23	chr5	-	4773	7	NNC	ENSMUSG00000042249.12	novel	4455	21	NA	NA	-1503	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	30.2145108626082	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTTTATTATTTATTT	6415	False	NA	-9	True	ATTAAA	-17	NA	113075167	113060464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113074077_113074195
ES.26738.25	chr5	-	4431	21	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.9470314297517	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTTTATTATTTATTT	506	False	NA	-9	True	ATTAAA	-17	NA	113163413	113060464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121390_113121447_113133630_113133708_113163232
ES.26738.26	chr5	-	4453	21	FSM	ENSMUSG00000042249.12	ENSMUST00000200332.5	4455	21	-1	3	-1	-3	multi-exon	FALSE	canonical	1	4	junction_18	18.223885425452	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTGTTTATTATTTA	538	False	NA	-12	True	ATTAAA	-14	NA	113163381	113060467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
ES.26738.27	chr5	-	3884	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	-38	2687	-38	-570	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCATGTGTTATTATT	501	False	NA	NA	False	ACTAAA	-18	NA	113163418	113061034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.28	chr5	-	3784	22	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-10	-570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.6632649961753	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCATGTGTTATTATT	529	False	NA	NA	False	ACTAAA	-18	NA	113163390	113061034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066723_113066794_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.29	chr5	-	3122	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	17	-1158	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	18.5694772345519	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATGGGGTTTTTTTTTT	567	False	NA	NA	False	NA	NA	NA	113163352	113061622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.3	chr5	-	6242	17	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	19.5667926600146	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGAGGCTGACATCT	540	False	NA	-3	True	AATAAA	-19	NA	113163379	113058346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113121372_113121447_113133630_113133708_113163232
ES.26738.30	chr5	-	2308	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-28	1483	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	18.5694772345519	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTATGTCTGGCAGG	511	False	NA	NA	False	NA	NA	NA	113163408	113062492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.31	chr5	-	1646	15	ISM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	13	17878	2	-8298	5prime_fragment	FALSE	canonical	3	54	junction_1	10.8024940430912	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCCCACTTGCTAAAGA	552	False	NA	NA	False	NA	NA	NA	113163367	113076225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.32	chr5	-	2029	13	ISM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	10	26383	-1	-16803	5prime_fragment	FALSE	canonical	3	62	junction_2	10.2699670020026	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTCTGTTATTCCATAAT	549	False	NA	NA	False	NA	NA	NA	113163370	113084730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.33	chr5	-	1666	6	FSM	ENSMUSG00000042249.12	ENSMUST00000197776.2	1570	6	-1	-95	-1	95	multi-exon	FALSE	canonical	3	68	junction_4	10.1862652625975	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	549	False	NA	NA	False	NA	NA	NA	113163370	113108314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.4	chr5	-	6586	21	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.080028825974	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGAGGCTGACATCT	529	False	NA	-3	True	AATAAA	-19	NA	113163390	113058346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076479_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.6	chr5	-	6605	21	FSM	ENSMUSG00000042249.12	ENSMUST00000200332.5	4455	21	-33	-2117	-33	0	multi-exon	FALSE	canonical	1	4	junction_18	18.223885425452	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTGAGGCTGACATC	506	False	NA	-4	True	AATAAA	-18	NA	113163413	113058347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
ES.26738.7	chr5	-	6423	20	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	18.5694772345519	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTGAGGCTGACAT	540	False	NA	-5	True	AATAAA	-17	NA	113163379	113058348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ES.26738.8	chr5	-	6365	19	NIC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	18.4729532019112	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGCTTGAGGCTGACAT	529	False	NA	-5	True	AATAAA	-17	NA	113163390	113058348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113121372_113121447_113133630_113133708_113163232
ES.26738.9	chr5	-	6403	20	NNC	ENSMUSG00000042249.12	novel	6533	21	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.972907394338	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTGAGGCTGACA	549	False	NA	-6	True	AATAAA	-16	NA	113163370	113058349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113062941_113063778_113063852_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113163232
ES.26739.1	chr5	+	177	1	Intergenic	novelGene_22283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAATCCATTGC	NA	False	NA	NA	False	NA	NA	NA	113173083	113173260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113173100_113173300
ES.2674.1	chr10	+	3331	1	Intergenic	novelGene_2040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGCGCCACAATAGCAA	NA	False	NA	NA	False	NA	NA	NA	41663666	41666997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41663700_41667000
ES.26740.1	chr5	-	4134	1	NIC	ENSMUSG00000029352.15	novel	816	5	NA	NA	419	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTCTGTGTCACTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	113227838	113223704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113223700_113227800
ES.26740.4	chr5	-	2189	4	NNC	ENSMUSG00000029352.15	novel	828	4	NA	NA	218	-1	intron_retention	FALSE	canonical	1	1	junction_3	8.17856276425687	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCTGTGTCACTTC	NA	False	NA	NA	False	AATAAA	-16	NA	113228039	113223705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113225544_113226248_113226382_113227625_113227745_113227940
ES.26740.6	chr5	-	755	6	FSM	ENSMUSG00000029352.15	ENSMUST00000117143.8	749	6	1	-7	1	-1	multi-exon	FALSE	canonical	0	0	junction_4	9.86711710683521	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCTGTGTCACTTC	NA	False	NA	NA	False	AATAAA	-16	NA	113229448	113223705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625_113227745_113228345_113228447_113229421
ES.26741.1	chr5	+	173	1	Intergenic	novelGene_22284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGTCATATTATATAG	NA	False	NA	NA	False	NA	NA	NA	113242970	113243143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113243000_113243100
ES.26742.1	chr5	+	176	1	Intergenic	novelGene_22285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAATCTCAGA	NA	False	NA	NA	False	NA	NA	NA	113288801	113288977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113288800_113289000
ES.26743.1	chr5	-	10272	13	FSM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	-34	0	-34	0	multi-exon	FALSE	canonical	1	1	junction_11	8.88194172964949	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGCTGCATGTCCAC	NA	False	NA	2	True	AATAAA	-20	NA	113369136	113234188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626_113341774_113369076
ES.26743.11	chr5	-	2951	8	FSM	ENSMUSG00000051339.11	ENSMUST00000050125.9	5876	8	4	2921	4	-2921	multi-exon	FALSE	canonical	0	0	junction_7	7.54036755451237	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGATCTAGTTGCT	NA	False	NA	-4	True	NA	NA	NA	113311213	113237109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113310923
ES.26743.13	chr5	-	7187	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-16	-3060	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1499178978617	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTTCCTGACTCTCTT	NA	False	NA	NA	False	NA	NA	NA	113369118	113237248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238887_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369076
ES.26743.14	chr5	-	6969	13	FSM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	-36	3305	-36	-3305	multi-exon	FALSE	canonical	1	1	junction_11	8.88194172964949	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACCTGCCTCCCCTGTC	NA	False	NA	NA	False	NA	NA	NA	113369138	113237493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626_113341774_113369076
ES.26743.15	chr5	-	6022	12	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-12	-4078	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	7.20192811648668	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCAAAGTGCTTATGT	NA	False	NA	NA	False	CATAAA	-28	NA	113369114	113238266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113369076
ES.26743.16	chr5	-	6028	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-36	-4243	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	8.71899267882095	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCCTACCTTCTGACT	NA	False	NA	NA	False	TTTAAA	-20	NA	113369138	113238431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369076
ES.26743.2	chr5	-	8636	12	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-23	-1475	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	7.20192811648668	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTCCTTGGACATGG	NA	False	NA	NA	False	NA	NA	NA	113369125	113235663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113369076
ES.26743.3	chr5	-	8552	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-7	-1694	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	8.88194172964949	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAAATTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	113369109	113235882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369072
ES.26743.4	chr5	-	8402	12	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-8	-1694	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	7.20192811648668	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAAATTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	113369110	113235882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113369076
ES.26743.6	chr5	-	7521	12	NIC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-36	-2606	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	7.42343842276131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGAGTCTAACTTGT	NA	False	NA	NA	False	NA	NA	NA	113369138	113236794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113369076
ES.26743.7	chr5	-	5526	10	NIC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-36	-2917	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	8.64098759787715	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATCTAGTTGCTTGCC	NA	False	NA	0	True	NA	NA	NA	113369138	113237105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113369076
ES.26743.8	chr5	-	7205	12	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-34	-2917	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	7.20192811648668	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATCTAGTTGCTTGCC	NA	False	NA	0	True	NA	NA	NA	113369136	113237105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113369076
ES.26743.9	chr5	-	7366	13	NNC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	-50	-2919	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	8.71899267882095	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGATCTAGTTGCTTG	NA	False	NA	-2	True	NA	NA	NA	113369152	113237107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340063_113341626_113341774_113369076
ES.26744.1	chr5	+	3378	5	NNC	ENSMUSG00000066964.3	novel	1827	5	NA	NA	3569	1855	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTTTGTTTGTTTTT	NA	False	NA	18	True	NA	NA	NA	113378343	113388984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113378771_113382212_113382430_113383784_113383924_113385894_113388063_113388557
ES.26744.2	chr5	+	4994	4	NNC	ENSMUSG00000066964.3	novel	1827	5	NA	NA	3705	1837	intron_retention	FALSE	non_canonical	0	0	junction_1	3.77123616632825	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAGTTTACATACAATC	NA	False	NA	0	True	AATAAA	-29	NA	113378479	113388966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113378570_113382212_113382430_113383784_113388063_113388557
ES.26744.3	chr5	+	1202	4	ISM	ENSMUSG00000066964.3	ENSMUST00000086615.3	1827	5	3715	670	3715	-670	3prime_fragment	FALSE	canonical	1	1	junction_3	2.94392028877595	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAACTGTGCTGCTTCT	NA	False	NA	NA	False	AGTAAA	-17	NA	113378489	113386459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113378771_113382212_113382430_113383784_113383924_113385894
ES.26744.4	chr5	+	6095	2	NNC	ENSMUSG00000066964.3	novel	1827	5	NA	NA	7620	1855	intron_retention	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTTTGTTTGTTTTT	NA	False	NA	18	True	NA	NA	NA	113382394	113388984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113388063_113388557
ES.26745.1	chr5	+	4385	1	Intergenic	novelGene_22286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGGGCTACCGCTCT	NA	False	NA	NA	False	NA	NA	NA	113476833	113481218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113476800_113481200
ES.26745.2	chr5	+	367	1	Intergenic	novelGene_22287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTTTCATCTAAATTC	NA	False	NA	NA	False	NA	NA	NA	113478386	113478753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113478400_113478800
ES.26746.1	chr5	+	700	2	Intergenic	novelGene_22288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113483025	113484679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113483478_113484431
ES.26747.1	chr5	-	5144	25	FSM	ENSMUSG00000042216.14	ENSMUST00000048112.13	5161	25	17	0	8	0	multi-exon	FALSE	canonical	3	12	junction_24	23.4519307425968	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGTCTGGTTATTTGT	NA	False	NA	0	True	AATATA	-19	NA	113458635	113391085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ES.26747.10	chr5	-	5452	25	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	-36865	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	24.4894747799948	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113495517	113391094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113495225
ES.26747.12	chr5	-	4284	17	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.280557875618	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113428453	113391094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413929_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
ES.26747.13	chr5	-	5358	26	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.6365582011774	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113458632	113391094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403285_113406652_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ES.26747.14	chr5	-	4023	17	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.1657580007648	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113428463	113391094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411547_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
ES.26747.15	chr5	-	4388	16	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.2754473704919	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACATAACCGTGGGTC	NA	False	NA	-11	True	AATATA	-8	NA	113428452	113391096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422091_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ES.26747.16	chr5	-	3738	11	NNC	ENSMUSG00000042216.14	novel	2274	18	NA	NA	0	-2979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.8694591818962	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCACCATATGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	113428453	113408957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113409091_113409386_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ES.26747.17	chr5	-	2977	19	ISM	ENSMUSG00000042216.14	ENSMUST00000145708.8	3177	22	58	4796	1	2765	5prime_fragment	FALSE	canonical	3	12	junction_18	26.868449531875	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTCCGGTCAACTCTGC	NA	False	NA	NA	False	NA	NA	NA	113458585	113410774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ES.26747.19	chr5	-	2298	18	FSM	ENSMUSG00000042216.14	ENSMUST00000112325.8	2274	18	-27	3	11	-3	multi-exon	FALSE	canonical	3	12	junction_17	27.6471839796917	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCTGTCTCCTTGGA	NA	False	NA	NA	False	AGTAAA	-14	NA	113458632	113413542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ES.26747.20	chr5	-	1922	14	NNC	ENSMUSG00000042216.14	novel	2274	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.5298299633029	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGAGTGGTGTCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	113458637	113421818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433135_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ES.26747.21	chr5	-	1110	5	NNC	ENSMUSG00000042216.14	novel	1102	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.476659402887	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGAGTGGTGTCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	113428452	113421818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427497_113428192
ES.26747.23	chr5	-	954	6	NNC	ENSMUSG00000042216.14	novel	2274	18	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	27.2176413379264	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGAGTGGTGTCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	113428462	113421818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
ES.26747.24	chr5	-	2785	4	NIC	ENSMUSG00000042216.14	novel	1102	5	NA	NA	4	-4	intron_retention	FALSE	canonical	3	70	junction_2	7.78888096369861	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGGAGAGTGGTGTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	113428463	113421821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113424039_113426998_113427132_113427322_113427487_113428192
ES.26747.25	chr5	-	2742	1	NIC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	1699	-944	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCTCACATGATTGAG	NA	False	NA	NA	False	NA	NA	NA	113425503	113422761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113422800_113425500
ES.26747.26	chr5	-	2706	12	ISM	ENSMUSG00000042216.14	ENSMUST00000112325.8	2274	18	-9	9222	-9	-944	intron_retention	FALSE	canonical	3	13	junction_9	26.3752325593915	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCTCACATGATTGAG	NA	False	NA	NA	False	NA	NA	NA	113458614	113422761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413
ES.26747.27	chr5	-	5183	1	FSM	ENSMUSG00000104705.2	ENSMUST00000199950.2	1200	1	-2684	-1299	-2684	1299	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGCCCTAGATCATAGC	NA	False	NA	NA	False	NA	NA	NA	113472203	113467020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113467000_113472200
ES.26747.28	chr5	-	3916	1	FSM	ENSMUSG00000104705.2	ENSMUST00000199950.2	1200	1	-2713	-3	-2713	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTTTTCAGCCTATC	NA	False	NA	NA	False	NA	NA	NA	113472232	113468316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113468300_113472200
ES.26747.29	chr5	-	1126	1	Antisense	novelGene_ENSMUSG00000105174.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	113472194	113471068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_113471100_113472200
ES.26747.4	chr5	-	4200	17	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	19.3083531146496	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCGTGGGTCTGGTTAT	NA	False	NA	-4	True	AATATA	-15	NA	113428479	113391089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
ES.26747.6	chr5	-	4204	17	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	21.4781866087433	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACCGTGGGTCTGGTTA	NA	False	NA	-5	True	AATATA	-14	NA	113428462	113391090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428283_113428416
ES.26747.7	chr5	-	4890	22	NNC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	-4361	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.5096121641158	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACCGTGGGTCTGGTTA	NA	False	NA	-5	True	AATATA	-14	NA	113435119	113391090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422056_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090
ES.26747.9	chr5	-	2159	1	NIC	ENSMUSG00000042216.14	novel	5161	25	NA	NA	33949	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113393253	113391094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113391100_113393300
ES.26748.1	chr5	+	1631	2	Intergenic	novelGene_22289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGGTCTTATGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	113506878	113508567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113507212_113507269
ES.26749.1	chr5	-	2948	1	Intergenic	novelGene_22290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	113534709	113531761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113531800_113534700
ES.2675.1	chr10	+	3791	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	21	-3	21	3	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATTAATTTCATGTT	13	True	NA	11	True	AATAAA	-18	NA	41685951	41784423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ES.2675.2	chr10	+	5157	9	NIC	ENSMUSG00000038332.14	novel	3809	10	NA	NA	21	0	intron_retention	FALSE	canonical	3	40	junction_1	19.5320249846246	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	13	True	NA	8	True	AATAAA	-15	NA	41685951	41784420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41781361_41782331_41782477_41783267
ES.2675.3	chr10	+	3713	10	NNC	ENSMUSG00000038332.14	novel	3809	10	NA	NA	425	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	29.540932054806	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTTTATTAATTTC	417	False	NA	6	True	AATAAA	-13	NA	41686355	41784418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41780838_41781361_41782331_41782477_41783267
ES.2675.4	chr10	+	2608	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	-9	1	-9	-1	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTTATTAATTTCA	NA	False	NA	7	True	AATAAA	-14	NA	41763425	41784419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ES.2675.5	chr10	+	3965	9	NIC	ENSMUSG00000038332.14	novel	2600	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	34	junction_1	20.9090291501064	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGCTTTATTAATTT	NA	False	NA	5	True	AATAAA	-12	NA	41763435	41784417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41781361_41782331_41782477_41783267
ES.2675.6	chr10	+	2444	9	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	6601	1	-4333	-1	3prime_fragment	FALSE	canonical	3	61	junction_5	14.7033159525326	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTTATTAATTTCA	NA	False	NA	7	True	AATAAA	-14	NA	41770035	41784419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ES.2675.8	chr10	+	6886	2	NNC	ENSMUSG00000038332.14	novel	90	2	NA	NA	-2086	717	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGAGCAGAATCCCCT	NA	False	NA	NA	False	NA	NA	NA	41772282	41779262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41775783_41775876
ES.2675.9	chr10	+	4765	2	NNC	ENSMUSG00000038332.14	novel	90	2	NA	NA	3	685	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41774371	41779230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_41775787_41775880
ES.26750.1	chr5	-	3169	1	Intergenic	novelGene_22291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	113570715	113567546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113567500_113570700
ES.26751.1	chr5	+	2790	8	Intergenic	novelGene_22292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAGTTAAGTTGCCTC	5109	False	NA	NA	False	NA	NA	NA	113594247	113604612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113594460_113595023_113595234_113597989_113598079_113598477_113598775_113598863_113599076_113601378_113601591_113601938_113602070_113603185
ES.26752.1	chr5	+	3407	4	NNC	ENSMUSG00000063430.10	novel	4351	2	NA	NA	-19007	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTGCTTTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	113619191	113641027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113619304_113621411_113621567_113636946_113637152_113638092
ES.26752.10	chr5	+	3554	6	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50752	13081	1019	-5222	internal_fragment	FALSE	canonical	3	38	junction_1	5.78273291792038	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGCAAACAAACAG	NA	False	NA	NA	False	NA	NA	NA	113689064	113714705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079
ES.26752.11	chr5	+	4385	8	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	1019	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.4016185031914	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTACAACCATTATTGAA	NA	False	NA	NA	False	AATAAA	-24	NA	113689064	113719932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113716841
ES.26752.12	chr5	+	3139	8	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	1040	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	19.7122152121832	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTGCCCAGTTGTGT	NA	False	NA	7	True	ATTAAA	-17	NA	113689085	113727779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113689396_113696409_113696461_113698961_113699151_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26752.13	chr5	+	2891	7	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	58095	7	8362	0	3prime_fragment	FALSE	canonical	3	32	junction_5	7.52034278178565	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTGCCCAGTTGTGT	NA	False	NA	7	True	ATTAAA	-17	NA	113696407	113727779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26752.14	chr5	+	177	1	Intergenic	novelGene_22294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGATATAGAAC	3822	False	NA	NA	False	NA	NA	NA	113721217	113721394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113721200_113721400
ES.26752.15	chr5	+	153	2	Intergenic	novelGene_22295	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAGAAGGCTCA	3824	False	NA	NA	False	NA	NA	NA	113721219	113738053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113721241_113737921
ES.26752.16	chr5	+	155	1	Intergenic	novelGene_22299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGGCTCAT	1883	False	NA	NA	False	NA	NA	NA	113737899	113738054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113737900_113738100
ES.26752.2	chr5	+	7076	9	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	-1226	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4618547546404	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTACAACCATTATTGAA	NA	False	NA	NA	False	AATAAA	-24	NA	113636972	113719932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113637152_113638192_113638807_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323
ES.26752.3	chr5	+	4311	10	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0388511535855	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGTTGTGTATGGCAT	NA	False	NA	14	True	ATTAAA	-24	NA	113638359	113727786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113638807_113687241_113687298_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26752.5	chr5	+	4075	9	FSM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	222	5	-83	2	multi-exon	FALSE	canonical	2	3	junction_1	15.7276627316331	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCCAGTTGTGTAT	NA	False	NA	9	True	ATTAAA	-19	NA	113638534	113727781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113638807_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26752.6	chr5	+	3914	8	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50063	2	330	-2	3prime_fragment	FALSE	canonical	3	32	junction_6	7.59430506285829	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCAGTTGTGTATGGC	NA	False	NA	12	True	ATTAAA	-22	NA	113688375	113727784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26752.7	chr5	+	2678	8	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	855	-1866	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	17.4016185031914	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTCAAGCAGCCGCGG	NA	False	NA	NA	False	CATAAA	-1	NA	113688900	113718061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113716841
ES.26752.8	chr5	+	3899	7	ISM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	50670	9739	937	-1880	internal_fragment	FALSE	canonical	3	32	junction_6	8.1325819325039	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGTCAGCATAAATATTTC	NA	False	NA	NA	False	NA	NA	NA	113688982	113718047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323
ES.26752.9	chr5	+	3114	8	NNC	ENSMUSG00000063430.10	novel	4302	9	NA	NA	994	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.4309131916224	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTGCCCAGTTGTGT	NA	False	NA	7	True	ATTAAA	-17	NA	113689039	113727779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113689265_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ES.26753.1	chr5	-	1367	1	Intergenic	novelGene_22293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	113704353	113702986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113703000_113704400
ES.26754.1	chr5	-	5157	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATATAGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	113734505	113706895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_113711932_113734384
ES.26754.2	chr5	-	4941	3	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	15	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAGAGACTAAGCGAGC	NA	False	NA	NA	False	NA	NA	NA	113734502	113707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_113711176_113711238_113711932_113734384
ES.26754.3	chr5	-	2029	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	113734497	113710015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_113711932_113734384
ES.26754.4	chr5	-	743	2	Antisense	novelGene_ENSMUSG00000063430.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCTATGTGCAATCTG	2013	False	NA	-2	True	NA	NA	NA	113722766	113711248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_113711932_113722706
ES.26754.5	chr5	-	623	2	Intergenic	novelGene_22296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGTTCTGACCGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	113734566	113733847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113734289_113734384
ES.26754.6	chr5	-	336	2	Intergenic	novelGene_22297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAACAGAAAAAAGTAACC	NA	False	NA	16	True	NA	NA	NA	113734563	113734131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113734289_113734384
ES.26754.7	chr5	-	368	1	Intergenic	novelGene_22298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGGGGTTCTATCGT	NA	False	NA	-4	True	NA	NA	NA	113734519	113734151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113734200_113734500
ES.26755.1	chr5	-	4624	1	Intergenic	novelGene_22300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAGCTTGTGTGAGACT	NA	False	NA	NA	False	AATAAA	-15	NA	113749460	113744836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113744800_113749500
ES.26755.2	chr5	-	1911	1	Intergenic	novelGene_22301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCGATCCGTGGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	113749172	113747261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113747300_113749200
ES.26756.1	chr5	+	255	1	Intergenic	novelGene_22302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCATTTTTATGAGCCC	NA	False	NA	NA	False	NA	NA	NA	113760077	113760332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113760100_113760300
ES.26757.1	chr5	+	178	2	Intergenic	novelGene_22304	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113791675	113973730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113791695_113973571
ES.26757.10	chr5	+	1867	7	Intergenic	novelGene_22308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	113893513	113910578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113893590_113896202_113896331_113897288_113897336_113899156_113899339_113900887_113900993_113902128_113902261_113909381
ES.26757.11	chr5	+	5504	2	Intergenic	novelGene_22309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACAGTCCGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	113903105	113908948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113905150_113905488
ES.26757.12	chr5	+	315	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	-25	-86	-25	86	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGAG	NA	False	NA	17	True	AATAAA	-12	NA	113905158	113905473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113905200_113905500
ES.26757.13	chr5	+	3877	1	Antisense	novelGene_ENSMUSG00000018974.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	113906701	113910578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_113906700_113910600
ES.26757.14	chr5	+	4425	1	Genic_Genomic	ENSMUSG00000025825.13	novel	NA	NA	NA	NA	-1558	-1425	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAAGCC	2037	False	NA	NA	False	NA	NA	NA	113909250	113913675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_113909200_113913700
ES.26757.15	chr5	+	1007	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	-52	2	-52	-2	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCTCGACTCCCT	3543	False	NA	NA	False	AATAAA	-28	NA	113910756	113916347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ES.26757.16	chr5	+	1268	5	NNC	ENSMUSG00000025825.13	novel	1116	5	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.109355835419	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGAAGCTGTCTACC	3564	False	NA	NA	False	AATAAA	-19	NA	113910777	113915857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915461_113915671
ES.26757.17	chr5	+	1067	5	FSM	ENSMUSG00000025825.13	ENSMUST00000134881.2	489	5	-250	-328	27	0	multi-exon	FALSE	canonical	3	53	junction_1	300.515390620847	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3622	False	NA	NA	False	AATAAA	-15	NA	113910835	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911158_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ES.26757.18	chr5	+	4170	2	ISM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	-19	2	-19	-2	intron_retention	FALSE	canonical	3	687	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTGTACTGAACCT	3631	False	NA	NA	False	AATAAA	-13	NA	113910844	113916332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911006_113912323
ES.26757.19	chr5	+	1127	5	FSM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	17	junction_4	304.763330307306	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3639	False	NA	NA	False	AATAAA	-15	NA	113910852	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915140_113915893
ES.26757.2	chr5	+	173	2	Intergenic	novelGene_22303	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	113791675	113949486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113791773_113949410
ES.26757.20	chr5	+	1204	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-11	202	-11	-202	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTTC	3639	False	NA	NA	False	NA	NA	NA	113910852	113915657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ES.26757.21	chr5	+	3193	3	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	687	junction_1	40.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCTCGACTCCCT	3640	False	NA	NA	False	AATAAA	-28	NA	113910853	113916347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113911006_113912323_113914911_113915893
ES.26757.22	chr5	+	1498	2	ISM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-4	2184	-4	-1425	intron_retention	FALSE	canonical	3	687	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAAGCC	3646	False	NA	NA	False	NA	NA	NA	113910859	113913675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911006_113912323
ES.26757.23	chr5	+	657	3	ISM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-4	2184	-4	-1425	5prime_fragment	FALSE	canonical	3	687	junction_1	24.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAAGCC	3646	False	NA	NA	False	NA	NA	NA	113910859	113913675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911006_113912323_113912438_113913278
ES.26757.24	chr5	+	1872	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-2	-475	-2	0	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3648	False	NA	NA	False	AATAAA	-15	NA	113910861	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ES.26757.25	chr5	+	3324	3	NIC	ENSMUSG00000025825.13	novel	489	5	NA	NA	-2	0	intron_retention	FALSE	canonical	3	53	junction_1	357.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3648	False	NA	NA	False	AATAAA	-15	NA	113910861	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113911158_113912323_113914911_113915893
ES.26757.26	chr5	+	1725	4	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	687	junction_1	33.2565782966318	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTTCTGTACTGAAC	3649	False	NA	NA	False	AATAAA	-11	NA	113910862	113916330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113911006_113912323_113913390_113914831_113914911_113915893
ES.26757.27	chr5	+	868	5	NNC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	317.408648275374	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3649	False	NA	NA	False	AATAAA	-15	NA	113910862	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113911006_113912323_113912418_113913278_113913390_113914831_113914911_113915893
ES.26757.28	chr5	+	1877	4	NIC	ENSMUSG00000025825.13	novel	489	5	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	53	junction_1	329.551547139779	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTTCTGTACTGAAC	3649	False	NA	NA	False	AATAAA	-11	NA	113910862	113916330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113911158_113912323_113913390_113914831_113914911_113915893
ES.26757.29	chr5	+	805	4	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	333.647518598096	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTGTACTGAACCT	3651	False	NA	NA	False	AATAAA	-13	NA	113910864	113916332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113911006_113912323_113912438_113913278_113913390_113915893
ES.26757.3	chr5	+	174	2	Intergenic	novelGene_22305	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	113791676	113949487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113791695_113949331
ES.26757.30	chr5	+	3311	3	ISM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	1	0	1	0	intron_retention	FALSE	canonical	3	687	junction_1	24.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3651	False	NA	NA	False	AATAAA	-15	NA	113910864	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911006_113912323_113912438_113913278
ES.26757.31	chr5	+	862	5	NNC	ENSMUSG00000025825.13	novel	957	5	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	323.444257175792	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTTCTGTACTGAAC	3654	False	NA	NA	False	AATAAA	-11	NA	113910867	113916330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113910989_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ES.26757.32	chr5	+	5255	2	NNC	ENSMUSG00000025825.13	novel	1116	5	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3655	False	NA	NA	False	AATAAA	-15	NA	113910868	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113915461_113915671
ES.26757.33	chr5	+	2191	4	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	735	junction_2	15.3260852434302	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTTTTCTGTACTGA	3658	False	NA	NA	False	AATAAA	-9	NA	113910871	113916328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113912438_113913278_113913390_113914831_113914911_113915893
ES.26757.34	chr5	+	839	3	FSM	ENSMUSG00000025825.13	ENSMUST00000145778.8	388	3	-194	-257	-7	-2	multi-exon	FALSE	canonical	3	10	junction_2	21.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTGTACTGAACCT	3658	False	NA	NA	False	AATAAA	-13	NA	113910871	113916332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113911158_113912323_113912438_113915893
ES.26757.35	chr5	+	1642	2	ISM	ENSMUSG00000025825.13	ENSMUST00000123616.8	773	4	-7	1421	-7	-1421	intron_retention	FALSE	canonical	3	53	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGAAAAAAGCCAGTT	3658	False	NA	NA	False	NA	NA	NA	113910871	113913679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911158_113912323
ES.26757.36	chr5	+	3453	3	ISM	ENSMUSG00000025825.13	ENSMUST00000134881.2	489	5	-211	-328	-4	0	intron_retention	FALSE	canonical	3	53	junction_1	341.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3661	False	NA	NA	False	AATAAA	-15	NA	113910874	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911158_113912323_113912438_113913278
ES.26757.37	chr5	+	3633	3	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	736	junction_1	16	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTCTGTACTGAACC	3661	False	NA	NA	False	AATAAA	-12	NA	113910874	113916331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113912438_113913278_113914911_113915893
ES.26757.38	chr5	+	3927	3	NNC	ENSMUSG00000025825.13	novel	1116	5	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	343.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3665	False	NA	NA	False	AATAAA	-15	NA	113910878	113916334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113911006_113912323_113915461_113915671
ES.26757.39	chr5	+	4275	2	ISM	ENSMUSG00000025825.13	ENSMUST00000145778.8	388	3	-178	-253	9	-6	intron_retention	FALSE	canonical	3	53	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTTTTCTGTACTGA	3674	False	NA	NA	False	AATAAA	-9	NA	113910887	113916328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_113911158_113912323
ES.26757.4	chr5	+	154	1	Intergenic	novelGene_22307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7818	False	NA	NA	False	NA	NA	NA	113836726	113836880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113836700_113836900
ES.26757.40	chr5	+	175	1	Intergenic	novelGene_22311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	3787	False	NA	NA	False	NA	NA	NA	113949312	113949487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113949300_113949500
ES.26757.41	chr5	+	269	1	Intergenic	novelGene_22312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	113973552	113973821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_113973600_113973800
ES.26757.5	chr5	+	2782	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-29	380	-29	-380	multi-exon	FALSE	canonical	3	46	junction_2	4.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGGCTAATGCCGATT	686	False	NA	NA	False	AATAAA	-16	NA	113873834	113878281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113874111_113874881_113875234_113876127
ES.26757.6	chr5	+	3167	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	-27	-7	-27	7	multi-exon	FALSE	canonical	3	46	junction_2	4.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTTGTCTCATCCAGGA	688	False	NA	NA	False	AATAAA	-18	NA	113873836	113878668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113874111_113874881_113875234_113876127
ES.26757.7	chr5	+	4827	1	Genic_Genomic	ENSMUSG00000053334.7	novel	NA	NA	NA	NA	-25	4	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCGTTGTCTCATCCA	690	False	NA	NA	False	AATAAA	-15	NA	113873838	113878665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_113873800_113878700
ES.26757.8	chr5	+	4516	2	NNC	ENSMUSG00000053334.7	novel	3133	3	NA	NA	-11	2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGCGTTGTCTCATC	704	False	NA	NA	False	AATAAA	-13	NA	113873852	113878663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_113877606_113877900
ES.26757.9	chr5	+	1794	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	26	1313	26	-1313	multi-exon	FALSE	canonical	3	46	junction_2	4.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAGTTCAGCCAAGT	741	False	NA	NA	False	ACTAAA	-23	NA	113873889	113877348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_113874111_113874881_113875234_113876127
ES.26758.1	chr5	-	2625	1	Genic_Genomic	ENSMUSG00000042190.13	novel	NA	NA	NA	NA	12673	36	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAGGCGTACTCTCC	NA	False	NA	36	True	AATACA	-7	NA	113753003	113750378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_113750400_113753000
ES.26758.10	chr5	-	2825	1	Genic_Genomic	ENSMUSG00000042190.13	novel	NA	NA	NA	NA	-22	-9495	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAACTAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	113781686	113778861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_113778900_113781700
ES.26758.2	chr5	-	2832	3	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	-3765	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	3229	False	NA	-7	True	CATAAA	-44	NA	113769441	113750421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113753002_113754588_113754678_113769278
ES.26758.3	chr5	-	2089	3	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	10996	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	NA	False	NA	-7	True	CATAAA	-44	NA	113754680	113750421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113750786_113751368_113753002_113754588
ES.26758.4	chr5	-	2824	4	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	1	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.74165738677394	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	NA	False	NA	-7	True	CATAAA	-44	NA	113788486	113750421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113751031_113751080_113753002_113754588_113754678_113788281
ES.26758.5	chr5	-	3390	5	NNC	ENSMUSG00000042190.13	novel	1081	3	NA	NA	-11328	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.77491721763537	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	5616	False	NA	-7	True	CATAAA	-44	NA	113799815	113750421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113753002_113754588_113754678_113765589_113765934_113769278_113769442_113799601
ES.26758.6	chr5	-	2780	5	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	-11333	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.67423461417477	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGACGTCTTGCTTGTT	5611	False	NA	-7	True	CATAAA	-44	NA	113799820	113750421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113750791_113751079_113753002_113754588_113754678_113788281_113788463_113799601
ES.26758.7	chr5	-	2929	3	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	6015	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTTGACGTCTTGC	NA	False	NA	-12	True	CATAAA	-39	NA	113759661	113750426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113753002_113754588_113754678_113759396
ES.26758.8	chr5	-	2684	5	NNC	ENSMUSG00000042190.13	novel	2882	3	NA	NA	-11252	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.67423461417477	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTAATGGTCTTTTTGA	5692	False	NA	-20	True	CATAAA	-31	NA	113799739	113750434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113750784_113751074_113753002_113754588_113754678_113788281_113788463_113799601
ES.26759.1	chr5	-	5310	2	Intergenic	novelGene_22306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAAGAGTTGTCCTTGCC	2591	False	NA	NA	False	NA	NA	NA	113830136	113818257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113823020_113829588
ES.2676.1	chr10	-	3477	12	NNC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-9	1194	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	91.9025714799542	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGCTGGCTTTTAACT	117	False	NA	NA	False	AATAAA	-18	NA	41685876	41593641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619189_41621766_41621918_41657479_41657547_41685568_41685660_41685783
ES.2676.10	chr10	-	2346	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-5	196	combination_of_known_splicesites	FALSE	canonical	3	19	junction_9	73.7545144046229	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAACAAAA	121	False	NA	NA	False	NA	NA	NA	41685872	41594639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
ES.2676.11	chr10	-	7016	2	ISM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	18426	1	-4594	0	intron_retention	FALSE	canonical	3	225	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	2952	False	NA	4	True	AATAAA	-25	NA	41603501	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_41595904_41597552
ES.2676.13	chr10	-	6902	10	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	131	junction_9	33.1710866215492	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	359	False	NA	4	True	AATAAA	-25	NA	41685634	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.14	chr10	-	3040	10	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-5611	0	intron_retention	FALSE	canonical	0	0	junction_3	78.5004521493623	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	5901	False	NA	4	True	AATAAA	-25	NA	41628245	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599041_41599856_41599935_41604623_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
ES.2676.15	chr10	-	3358	11	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	63.8297736170198	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	368	False	NA	4	True	AATAAA	-25	NA	41685625	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41603469_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.16	chr10	-	3289	9	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	43	junction_3	57.7683953386278	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	378	False	NA	4	True	AATAAA	-25	NA	41685615	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.17	chr10	-	2359	12	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	60.5360353033458	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	89	False	NA	4	True	AATAAA	-25	NA	41685904	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
ES.2676.18	chr10	-	2770	10	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	9	junction_8	64.2408661903689	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	389	False	NA	4	True	AATAAA	-25	NA	41685604	41594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41605405_41606994_41607112_41616835_41616958_41619037_41619189_41621766_41621918_41685568
ES.2676.19	chr10	-	2014	10	NNC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.6797090355576	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597640_41598920_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.2	chr10	-	3434	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	1191	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	82.1407781678292	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATGGCTGGCTTTTA	368	False	NA	NA	False	AATAAA	-15	NA	41685625	41593644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619189_41621766_41621918_41657479_41657547_41685568
ES.2676.20	chr10	-	2240	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-71	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	64.5173620043473	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	7	True	NA	0	True	AATAAA	-21	NA	41685938	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685841
ES.2676.21	chr10	-	2320	10	NNC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-5637	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_9	71.4082334361321	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	5875	False	NA	0	True	AATAAA	-21	NA	41628271	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
ES.2676.22	chr10	-	5086	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5623	1	intron_retention	FALSE	canonical	0	0	junction_8	85.8	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	5889	False	NA	0	True	AATAAA	-21	NA	41628257	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41617290_41617435_41619037_41621918_41628007
ES.2676.23	chr10	-	2261	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	-10	4	-1	1	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	374	False	NA	0	True	AATAAA	-21	NA	41685619	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ES.2676.25	chr10	-	2289	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	78.7439621193138	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	397	False	NA	0	True	AATAAA	-21	NA	41685596	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41646644_41646763_41685568
ES.2676.26	chr10	-	2208	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-68	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_9	73.7545144046229	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	58	False	NA	0	True	AATAAA	-21	NA	41685935	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
ES.2676.27	chr10	-	2311	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	76.3137282798249	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41631694_41631806_41685568
ES.2676.28	chr10	-	1742	8	NIC	ENSMUSG00000019813.17	novel	1949	10	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	74.5489840333734	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	373	False	NA	0	True	AATAAA	-21	NA	41685620	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41685568
ES.2676.29	chr10	-	2122	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	398	False	NA	0	True	AATAAA	-21	NA	41685595	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
ES.2676.3	chr10	-	3388	10	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	-52	1191	combination_of_known_splicesites	FALSE	canonical	3	19	junction_9	73.7545144046229	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATGGCTGGCTTTTA	74	False	NA	NA	False	AATAAA	-15	NA	41685919	41593644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685783
ES.2676.30	chr10	-	2137	10	NIC	ENSMUSG00000019813.17	novel	1769	11	NA	NA	-55	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	77.0888536561849	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	71	False	NA	0	True	AATAAA	-21	NA	41685922	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685841
ES.2676.31	chr10	-	8310	9	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	1	1	intron_retention	TRUE	non_canonical	0	0	junction_4	81.8274671183216	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597590_41597698_41598879_41599002_41599856_41601810_41603515_41605405_41606994_41607112_41616835_41616958_41619037_41621918_41685568
ES.2676.32	chr10	-	2219	12	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	84.2623804572988	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ES.2676.33	chr10	-	1782	8	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	84.7447548193265	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41685568
ES.2676.34	chr10	-	2034	10	NIC	ENSMUSG00000019813.17	novel	1949	10	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_7	77.9179688938515	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	108	False	NA	0	True	AATAAA	-21	NA	41685885	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41621766_41621918_41685568_41685660_41685783
ES.2676.35	chr10	-	2303	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	73.8131435808641	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007_41628111_41685568
ES.2676.36	chr10	-	2210	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-31	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	75.1378067287035	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	95	False	NA	0	True	AATAAA	-21	NA	41685898	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685783
ES.2676.37	chr10	-	2162	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.6407395461755	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	368	False	NA	0	True	AATAAA	-21	NA	41685625	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597689_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619189_41621766_41621918_41685568
ES.2676.38	chr10	-	7247	7	NNC	ENSMUSG00000019813.17	novel	1949	10	NA	NA	-5474	1	intron_retention	FALSE	canonical	2	11	junction_5	90.5642804249495	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	6038	False	NA	0	True	AATAAA	-21	NA	41628108	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41605405_41606994_41607112_41621766_41621918_41628007
ES.2676.39	chr10	-	2253	11	FSM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	-25	4	-22	1	multi-exon	FALSE	canonical	3	12	junction_10	72.0486641097529	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	104	False	NA	0	True	AATAAA	-21	NA	41685889	41594840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
ES.2676.4	chr10	-	3405	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	-31	-1197	-8	1191	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATGGCTGGCTTTTA	359	False	NA	NA	False	AATAAA	-15	NA	41685634	41593644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.40	chr10	-	4248	2	NNC	ENSMUSG00000019813.17	novel	1949	10	NA	NA	-282	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	7264	False	NA	-1	True	AATAAA	-20	NA	41599189	41594841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41596199_41596298
ES.2676.42	chr10	-	2239	12	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.2220826549385	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	373	False	NA	-1	True	AATAAA	-20	NA	41685620	41594841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41632733_41632779_41685568
ES.2676.43	chr10	-	1699	7	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	85.2812340957194	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	388	False	NA	-1	True	AATAAA	-20	NA	41685605	41594841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
ES.2676.44	chr10	-	2290	12	NNC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.8865631954301	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	368	False	NA	-1	True	AATAAA	-20	NA	41685625	41594841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41631694_41631806_41657479_41657547_41685568
ES.2676.45	chr10	-	2274	10	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5627	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	80.0792817027269	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	5885	False	NA	-1	True	AATAAA	-20	NA	41628261	41594841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41619037_41619218_41621766_41621918_41628007
ES.2676.46	chr10	-	1875	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-14	88	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCTTTGAAGACAGTT	353	False	NA	NA	False	ACTAAA	-16	NA	41685640	41595132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
ES.2676.47	chr10	-	3822	1	Intergenic	novelGene_2039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATGTCTGTGTGTCTG	2537	False	NA	NA	False	NA	NA	NA	41603916	41600094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41600100_41603900
ES.2676.49	chr10	-	783	4	NNC	ENSMUSG00000019813.17	novel	711	3	NA	NA	8	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.2818658612382	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAGA	398	False	NA	NA	False	NA	NA	NA	41685595	41618715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41619218_41621766_41621918_41628007_41628111_41685568
ES.2676.5	chr10	-	3308	10	ISM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	239	-1191	1	1190	3prime_fragment	FALSE	canonical	3	43	junction_4	55.5797724996344	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGATGGCTGGCTTTT	368	False	NA	NA	False	AATAAA	-14	NA	41685625	41593645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ES.2676.50	chr10	-	3671	1	NIC	ENSMUSG00000019813.17	novel	2232	11	NA	NA	1	-4515	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTTAAGCTTTTGTAA	368	False	NA	NA	False	AATGAA	-37	NA	41685625	41681954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41682000_41685600
ES.2676.6	chr10	-	3588	11	NNC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-5623	1190	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	58.0965575572254	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGATGGCTGGCTTTT	5889	False	NA	NA	False	AATAAA	-14	NA	41628257	41593645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41628007
ES.2676.7	chr10	-	3560	11	NIC	ENSMUSG00000019813.17	novel	2177	11	NA	NA	-228	1189	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	81.28622269487	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATAGATGGCTGGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	41686095	41593646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41619037_41619218_41621766_41621918_41685568_41685660_41685841
ES.2676.8	chr10	-	5205	2	NNC	ENSMUSG00000019813.17	novel	557	2	NA	NA	-987	246	intron_retention	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAATTAGATAAAAAGCT	6559	False	NA	NA	False	NA	NA	NA	41599894	41594589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_41596199_41596298
ES.2676.9	chr10	-	2060	1	Genic_Genomic	ENSMUSG00000019813.17	novel	NA	NA	NA	NA	2208	196	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAACAAAA	9754	False	NA	NA	False	NA	NA	NA	41596699	41594639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_41594600_41596700
ES.26760.1	chr5	-	1677	6	NNC	ENSMUSG00000042184.12	novel	706	3	NA	NA	977	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGTGCAC	NA	False	NA	NA	False	ATTAAA	-13	NA	113861833	113830483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113830881_113831422_113832341_113832476_113832584_113834013_113834115_113835973_113836055_113861760
ES.26760.2	chr5	-	4181	1	NIC	ENSMUSG00000042184.12	novel	706	3	NA	NA	1023	-15849	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTCTGCCTTCGCACTT	NA	False	NA	NA	False	ATTAAA	-10	NA	113861787	113857606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113857600_113861800
ES.26761.1	chr5	-	5456	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	859	-1868	-13	1868	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTGTTAAAATAATAT	NA	False	NA	NA	False	AATAAA	-18	NA	113909712	113878638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.12	chr5	-	3957	18	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	23	junction_11	97.2661955808294	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113882796_113883107_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893441_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.13	chr5	-	6126	12	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	84	0	intron_retention	FALSE	canonical	3	381	junction_6	23.8306698698606	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	9471	False	NA	-16	True	ATTAAA	-16	NA	113899231	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113882796_113883107_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113893587_113896199_113896325_113897281_113897334_113899155
ES.26761.14	chr5	-	4828	18	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	367	junction_16	27.9421052477214	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.16	chr5	-	2173	10	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	135.488234649342	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113882796_113883107_113883202_113893481_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.19	chr5	-	6112	15	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	intron_retention	FALSE	canonical	3	367	junction_13	24.8907818360164	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.26	chr5	-	3511	18	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	102.361561503117	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.27	chr5	-	3376	19	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.6199103754359	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909713	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883853_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.3	chr5	-	4668	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	-217	-4	-217	4	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATTGCAGCTGGGT	NA	False	NA	-12	True	ATTAAA	-20	NA	113910788	113880502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.30	chr5	-	6820	3	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	3982	0	intron_retention	FALSE	canonical	3	407	junction_2	9.5	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113888836	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113883261_113883640_113884854_113885983
ES.26761.32	chr5	-	3397	18	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	100.712238666912	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909712	113880506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.33	chr5	-	3450	18	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	129.778331106982	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113909712	113880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897388_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.34	chr5	-	3746	10	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	53	-1	intron_retention	FALSE	canonical	3	381	junction_8	26.3555930297654	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTGTGCATTGCAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	113892765	113880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113882604_113882796_113883107_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658
ES.26761.40	chr5	-	4695	16	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	151	0	intron_retention	FALSE	canonical	3	23	junction_9	100.517240091218	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTTGTGCATTGCAG	NA	False	NA	-18	True	ATTAAA	-14	NA	113909548	113880508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893441_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.47	chr5	-	4123	18	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_11	101.143907208482	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTTGTGCATTGCAG	NA	False	NA	-18	True	ATTAAA	-14	NA	113909712	113880508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892389_113893441_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.49	chr5	-	3964	18	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	367	junction_16	28.4465138856967	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGCCTTGTGCATTGC	NA	False	NA	-20	True	ATTAAA	-12	NA	113909712	113880510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113882604_113882796_113883107_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.51	chr5	-	4821	16	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	-49	intron_retention	FALSE	canonical	3	367	junction_14	25.2486303258876	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGAGTCTCCCCATTG	NA	False	NA	-67	True	NA	NA	NA	113909712	113880557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113882604_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.52	chr5	-	3410	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	859	178	-13	-176	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAATGTCTGCGACCTTT	NA	False	NA	NA	False	NA	NA	NA	113909712	113880684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.6	chr5	-	4464	17	NNC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	74	2	intron_retention	FALSE	canonical	3	23	junction_10	98.50791132569	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCATTGCAGCTGG	NA	False	NA	-14	True	ATTAAA	-18	NA	113909625	113880504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113881365_113882604_113882796_113883107_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893441_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26761.7	chr5	-	4562	17	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	-13	2	intron_retention	FALSE	canonical	3	367	junction_15	26.1889170261009	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCATTGCAGCTGG	NA	False	NA	-14	True	ATTAAA	-18	NA	113909712	113880504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113881365_113882604_113882796_113883107_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ES.26762.1	chr5	-	178	1	Intergenic	novelGene_22310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAGAAGGAAAGA	4610	False	NA	NA	False	NA	NA	NA	113940659	113940481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113940500_113940700
ES.26763.1	chr5	-	1793	3	NNC	ENSMUSG00000048163.14	novel	1855	2	NA	NA	-9	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	7	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACGATAGCTGAGTCC	6269	False	NA	NA	False	AATAAA	-9	NA	113968571	113956618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113957728_113957787_113958310_113968409
ES.26764.1	chr5	-	2165	1	Intergenic	novelGene_22313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTTAATAAGTCTCTA	9208	False	NA	NA	False	NA	NA	NA	113979537	113977372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_113977400_113979500
ES.26765.1	chr5	+	5678	3	NIC	ENSMUSG00000090458.2	novel	372	2	NA	NA	-978	6153	intron_retention	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAATGACACACA	NA	False	NA	NA	False	NA	NA	NA	113979683	113987330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_113983468_113984206_113984265_113985494
ES.26766.1	chr5	+	169	1	Intergenic	novelGene_22314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTTTTAAAA	243	False	NA	NA	False	NA	NA	NA	114005038	114005207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114005000_114005200
ES.26767.1	chr5	+	3006	2	Antisense	novelGene_ENSMUSG00000004530.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAACAAA	7419	False	NA	NA	False	NA	NA	NA	114013371	114022110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114016055_114021787
ES.26768.1	chr5	-	3969	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	-413	-65	-413	65	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCCGCAGACCTGGGT	NA	False	NA	NA	False	NA	NA	NA	114047232	113980431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.10	chr5	-	3462	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	1	6	junction_6	295.121009079327	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046830	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988750_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.12	chr5	-	4571	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	5	junction_10	389.223791667467	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046772	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114045821_114046003_114046671
ES.26768.13	chr5	-	4205	10	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	909	junction_5	42.6539332851187	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046842	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.14	chr5	-	3051	9	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	2952	-1	intron_retention	FALSE	canonical	1	8	junction_8	320.237387534622	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	4	True	NA	NA	False	GATAAA	-14	NA	113993883	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_113993851
ES.26768.15	chr5	-	5567	9	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	-438	-1	intron_retention	FALSE	canonical	3	909	junction_4	43.6663485993505	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114047257	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113983468_113984206_113984265_113985494_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.18	chr5	-	3646	12	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_11	375.091129423105	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046761	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114040234_114040449_114046671
ES.26768.19	chr5	-	3112	9	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_8	322.853270658669	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046764	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114046671
ES.26768.2	chr5	-	3421	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	3	intron_retention	FALSE	non_canonical	0	0	junction_7	292.5633093879	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTGTGCTTCTTTCTC	NA	False	NA	NA	False	GATAAA	-18	NA	114046756	113980493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988900_113990247_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.22	chr5	-	3669	12	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	2	-1	intron_retention	FALSE	canonical	2	5	junction_11	374.321954498844	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTGTGCTGTGCTTCTT	NA	False	NA	NA	False	GATAAA	-14	NA	114046817	113980497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114045821_114046003_114046671
ES.26768.25	chr5	-	5455	9	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	-3	intron_retention	FALSE	canonical	3	909	junction_5	39.578245287026	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCGTGTGCTGTGCTTC	NA	False	NA	NA	False	GATAAA	-12	NA	114046756	113980499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.28	chr5	-	3421	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_6	296.903502842253	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCGTGTGCTGTGCTTC	NA	False	NA	NA	False	GATAAA	-12	NA	114046758	113980499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987704_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.3	chr5	-	6406	8	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	1	intron_retention	FALSE	canonical	3	909	junction_4	41.1607104121473	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTGCTGTGCTTCTTTC	NA	False	NA	NA	False	GATAAA	-16	NA	114046756	113980495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113983468_113984206_113984265_113985494_113986693_113987589_113987710_113988711_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.30	chr5	-	4420	10	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	16	-4	intron_retention	FALSE	canonical	3	905	junction_1	43.4113258249105	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCGTGTGCTGTGCTT	NA	False	NA	NA	False	GATAAA	-11	NA	114046750	113980500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.31	chr5	-	2322	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	52	1117	-1	-1117	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCGCGTTTCTGCAGTT	NA	False	NA	-1	True	NA	NA	NA	114046767	113981613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.32	chr5	-	2114	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	1	1376	1	-1376	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTGTATAAACACTC	NA	False	NA	NA	False	TATAAA	-19	NA	114046818	113981872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.33	chr5	-	1955	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	1	1535	1	1272	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTATTTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	114046818	113982031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.34	chr5	-	218	1	Intergenic	novelGene_22315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	881	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTTTGATCACTTAG	NA	False	NA	NA	False	AATAAA	-7	NA	114025180	114024962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114025000_114025200
ES.26768.35	chr5	-	172	1	Intergenic	novelGene_22316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	860	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAAAGACATATT	NA	False	NA	NA	False	NA	NA	NA	114026024	114025852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114025900_114026000
ES.26768.36	chr5	-	3128	2	Genic_Genomic	ENSMUSG00000105071.2	novel	4504	1	NA	NA	-1248	-570	multi-exon	FALSE	non_canonical	0	0	junction_1	0	854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACCT	NA	False	NA	NA	False	AATATA	-10	NA	114044207	114039025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_114042053_114044106
ES.26768.4	chr5	-	3416	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_5	292.505042691575	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046756	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986681_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.5	chr5	-	5807	9	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	24	0	intron_retention	FALSE	canonical	3	905	junction_1	40.4034342599735	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046795	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.6	chr5	-	3424	11	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_4	296.243970402775	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046756	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985633_113986583_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.7	chr5	-	3305	10	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	0	intron_retention	FALSE	canonical	2	5	junction_8	306.929396312878	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046756	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114020018_114020219_114046671
ES.26768.8	chr5	-	4375	10	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	905	junction_1	48.1571501556219	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046756	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ES.26768.9	chr5	-	3494	12	NNC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_10	376.429177428948	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046750	113980496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114034844_114034917_114046671
ES.26769.1	chr5	-	171	1	Intergenic	novelGene_22317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	114052041	114051870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114051900_114052000
ES.2677.1	chr10	-	4217	1	Intergenic	novelGene_2041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAAAATGAAGTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	41822063	41817846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_41817800_41822100
ES.26770.1	chr5	+	116	1	Intergenic	novelGene_22318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGATTTATTTATTTA	9123	False	NA	NA	False	AATAAA	-16	NA	114074589	114074705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114074600_114074700
ES.26771.1	chr5	+	3779	14	Antisense	novelGene_ENSMUSG00000042121.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCGGACAAAAAGGACT	NA	False	NA	NA	False	AATAAA	-6	NA	114079840	114111082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114081529_114084338_114084892_114088448_114088650_114089940_114090084_114091307_114091360_114093777_114093910_114095445_114095538_114096773_114096968_114098658_114098727_114099410_114099484_114104242_114104366_114104772_114104831_114108427_114108536_114110788
ES.26771.2	chr5	+	1424	5	Antisense	novelGene_ENSMUSG00000042121.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	24.3823706804732	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGACAACTT	NA	False	NA	NA	False	NA	NA	NA	114080954	114086138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114081005_114081431_114081615_114083588_114083712_114084546_114084912_114085435
ES.26771.3	chr5	+	2675	2	Antisense	novelGene_ENSMUSG00000042121.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAACTTT	NA	False	NA	NA	False	NA	NA	NA	114081490	114086139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114081615_114083588
ES.26772.1	chr5	+	1731	1	Intergenic	novelGene_22319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114125076	114126807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114125100_114126800
ES.26773.1	chr5	-	3009	2	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	23951	6164	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCAGATCTCCCGCACA	NA	False	NA	NA	False	NA	NA	NA	114080866	114068990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114068998_114077864
ES.26773.10	chr5	-	8415	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.584045319555	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTCCTGTGTATGCT	NA	False	NA	-19	True	AATAAA	-11	NA	114131841	114075162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098828_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.106	chr5	-	3608	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-7998	377	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	110.052542588427	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCACATTGGCGAGGTC	NA	False	NA	NA	False	AATACA	-17	NA	114112815	114079875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114112650
ES.26773.107	chr5	-	3598	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-1	377	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	104.498535289022	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCACATTGGCGAGGTC	NA	False	NA	NA	False	AATACA	-17	NA	114131841	114079875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088645_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.108	chr5	-	3543	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	357	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	109.278862651865	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTTTGCAACATGTCAA	NA	False	NA	NA	False	AAAAAG	-24	NA	114131850	114079895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.109	chr5	-	3355	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	-17	5098	-17	0	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGATTTGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	114131972	114080252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.11	chr5	-	7571	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-9	-712	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	109.278862651865	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCAGCTCTCGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	114131849	114075866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.111	chr5	-	3304	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-8075	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	110.052542588427	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATGTCTTGATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	114112892	114080256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114112650
ES.26773.112	chr5	-	2779	10	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	4940	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	157.997187035438	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCATGTCTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	114099877	114080258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114099801
ES.26773.113	chr5	-	4455	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	321	junction_12	41.0140688807371	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCATGTCTTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	114131851	114080258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.115	chr5	-	3248	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6165	-12	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTACTCTCATGTCTTG	NA	False	NA	NA	False	NA	NA	NA	114110982	114080264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.116	chr5	-	3256	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	15	-40	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_14	105.005077622611	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTCTGTAAGGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	114131873	114080292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131684
ES.26773.12	chr5	-	6245	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-3	591	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	109.278862651865	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTATTTTAGCTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	114131891	114077234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.13	chr5	-	5501	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	5056	588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.301663633492	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTATTTTAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	114099761	114077237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114079001_114079750_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091540_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410
ES.26773.14	chr5	-	6313	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	3	588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.392921863949	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTATTTTAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	114131885	114077237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099510_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.15	chr5	-	6331	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	22	2083	22	588	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTATTTTAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	114131933	114077237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.16	chr5	-	6312	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	579	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTCCACACCTGGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	114111028	114077246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.17	chr5	-	6954	14	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	9	108	intron_retention	FALSE	canonical	0	0	junction_9	109.407603340166	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATAGGCTTCCACTGTG	NA	False	NA	NA	False	NA	NA	NA	114131819	114077717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104250_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.18	chr5	-	5874	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	-46	2608	-46	63	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGGTCAATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	114132001	114077762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.2	chr5	-	6097	1	Genic_Genomic	ENSMUSG00000042121.17	novel	NA	NA	NA	NA	24020	454	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTGTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	114080797	114074700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_114074700_114080800
ES.26773.20	chr5	-	5795	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	62	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGGGTCAATTTCTG	NA	False	NA	NA	False	NA	NA	NA	114111028	114077763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.21	chr5	-	6459	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-4961	28	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	111.310748987852	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114109778	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114108840
ES.26773.22	chr5	-	5874	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	24	28	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131931	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
ES.26773.23	chr5	-	5662	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-5976	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	142.519475933671	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114110793	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110545_114110583_114110689
ES.26773.24	chr5	-	5769	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-5976	28	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	111.058969356627	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114110793	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110545
ES.26773.26	chr5	-	4322	8	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	7640	28	intron_retention	FALSE	non_canonical	0	0	junction_1	143.144282855746	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114097177	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114078125_114080397_114081527_114084336_114084890_114088446_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774
ES.26773.27	chr5	-	5546	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4700	28	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114100117	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
ES.26773.29	chr5	-	10441	11	NIC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-3854	28	intron_retention	FALSE	canonical	3	335	junction_8	36.0749220373378	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114108671	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114088648_114089939_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431
ES.26773.3	chr5	-	8370	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	67	-1	0	1	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTATGCTATGCTTTGC	NA	False	NA	-10	True	AATAAA	-20	NA	114131888	114075153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.30	chr5	-	5641	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	28	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	109.278862651865	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131850	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.31	chr5	-	5131	1	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	21889	28	mono-exon	FALSE	NA	NA	NA	NA	NA	680	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	8453	False	NA	NA	False	NA	NA	NA	114082928	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114077800_114082900
ES.26773.33	chr5	-	5718	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.392921863949	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131850	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099510_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.34	chr5	-	5470	12	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	109	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	119.433718953822	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114104708	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104590
ES.26773.35	chr5	-	5593	14	FSM	ENSMUSG00000042121.17	ENSMUST00000112298.10	5584	14	19	-28	7	28	multi-exon	FALSE	canonical	3	31	junction_8	101.835346858655	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131821	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.36	chr5	-	5041	9	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	-8	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	130.620574087699	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131896	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090037_114104283_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.37	chr5	-	5386	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	5107	28	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	124.174715622787	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114099710	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099554
ES.26773.38	chr5	-	5712	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-7	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	108.108316808955	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131847	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131697
ES.26773.39	chr5	-	5728	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	28	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_14	105.005077622611	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114131850	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131684
ES.26773.4	chr5	-	8342	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6150	-1	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATGCTATGCTTT	NA	False	NA	-12	True	AATAAA	-18	NA	114110967	114075155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.41	chr5	-	3217	3	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	20243	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	6807	False	NA	NA	False	NA	NA	NA	114084574	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114079001_114079750_114081527_114084336
ES.26773.42	chr5	-	5645	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6068	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	129.895588475227	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	NA	False	NA	NA	False	NA	NA	NA	114110885	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104213_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.45	chr5	-	3797	2	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	20308	28	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAAGTTTAATGACATCG	6872	False	NA	NA	False	NA	NA	NA	114084509	114077797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081422_114084336
ES.26773.47	chr5	-	3302	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-6026	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.218523276026	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAAGTTTAATGACATC	NA	False	NA	NA	False	NA	NA	NA	114110843	114077798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114078131_114080403_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.49	chr5	-	5615	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6039	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	129.895588475227	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCCAAGTTTAATGAC	NA	False	NA	NA	False	NA	NA	NA	114110856	114077801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099510_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.5	chr5	-	8357	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.392921863949	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTATGCTATGCT	NA	False	NA	-14	True	AATAAA	-16	NA	114131849	114075157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099510_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.51	chr5	-	5348	10	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	1626	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	168.171869757632	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114103191	114077834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114102989
ES.26773.53	chr5	-	5715	13	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6249	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	131.28158350152	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114111066	114077834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.58	chr5	-	5754	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	-30	2712	-30	-41	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGGTTTCTTCCACT	NA	False	NA	NA	False	AAAAAG	-24	NA	114131985	114077866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.59	chr5	-	5689	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6211	-44	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTGTGGGTTTCTTCC	NA	False	NA	NA	False	AAAAAG	-21	NA	114111028	114077869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.6	chr5	-	8028	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	5102	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	124.174715622787	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCTGTGTATGCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	114099715	114075160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099554
ES.26773.61	chr5	-	6826	14	NIC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	-61	intron_retention	FALSE	canonical	3	321	junction_12	41.0140688807371	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCACTTATTCCTGAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	114131850	114077886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.62	chr5	-	5500	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-234	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	108.108316808955	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCGATCATCCACTTA	NA	False	NA	NA	False	NA	NA	NA	114132189	114077895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114132153
ES.26773.63	chr5	-	5660	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-5978	-83	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	111.058969356627	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAGTCACCTTAAAAAGC	NA	False	NA	NA	False	AATACA	-43	NA	114110795	114077908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110545
ES.26773.64	chr5	-	5446	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-8016	-102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	111.562596858228	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCCACTACTGTCAAT	NA	False	NA	NA	False	AATACA	-24	NA	114112833	114077927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114112778
ES.26773.65	chr5	-	5171	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	-107	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTCCCACTACTG	NA	False	NA	NA	False	AATACA	-19	NA	114099877	114077932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
ES.26773.66	chr5	-	5673	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	23	-107	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTCCCACTACTG	NA	False	NA	NA	False	AATACA	-19	NA	114131865	114077932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
ES.26773.68	chr5	-	4954	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	-2	3484	-2	-813	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCAGACTTGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	114131957	114078638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.69	chr5	-	4898	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6190	-814	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCAGACTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	114111007	114078639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.7	chr5	-	8401	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCTGTGTATGCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	114131821	114075160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
ES.26773.71	chr5	-	4381	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	103	3952	-12	1146	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAAGCAGGAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	114131852	114079106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.72	chr5	-	4213	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6047	1071	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCGGCTCCCCCTTGCT	NA	False	NA	NA	False	AATAGA	-17	NA	114110864	114079181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.73	chr5	-	3852	10	NNC	ENSMUSG00000042121.17	novel	5584	14	NA	NA	4944	1071	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	157.997187035438	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCGGCTCCCCCTTGCT	NA	False	NA	NA	False	AATAGA	-17	NA	114099873	114079181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114099801
ES.26773.74	chr5	-	3922	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	1071	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCGGCTCCCCCTTGCT	NA	False	NA	NA	False	AATAGA	-17	NA	114099877	114079181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
ES.26773.75	chr5	-	3929	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	120	4387	5	711	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGAGAGTGGCCCCGTC	NA	False	NA	NA	False	NA	NA	NA	114131835	114079541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.78	chr5	-	3368	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	5113	518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	125.037954237903	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGAGAACAATGCTATG	NA	False	NA	-8	True	TATAAA	-20	NA	114099704	114079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099629
ES.26773.8	chr5	-	8226	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6009	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	129.895588475227	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCTGTGTATGCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	114110826	114075160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099510_114104240_114104363_114104769_114104835_114108431_114108536_114110788
ES.26773.81	chr5	-	3613	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	515	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	124.174715622787	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTTCTGAGAACAATGCT	NA	False	NA	-11	True	TATAAA	-17	NA	114099877	114079737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099554
ES.26773.84	chr5	-	4002	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-4	514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.046070628054	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTTCTGAGAACAATGC	NA	False	NA	-12	True	TATAAA	-16	NA	114131844	114079738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114095882_114096144_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.88	chr5	-	3680	14	FSM	ENSMUSG00000042121.17	ENSMUST00000112298.10	5584	14	-10	1914	-10	513	multi-exon	FALSE	canonical	3	31	junction_8	101.835346858655	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCGTTCTGAGAACAATG	NA	False	NA	-13	True	TATAAA	-15	NA	114131850	114079739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ES.26773.89	chr5	-	3364	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	513	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCGTTCTGAGAACAATG	NA	False	NA	-13	True	TATAAA	-15	NA	114099877	114079739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
ES.26773.9	chr5	-	8225	13	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-272	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	114.415422425864	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTCCTGTGTATGCT	NA	False	NA	-19	True	AATAAA	-11	NA	114105089	114075162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114104916
ES.26773.90	chr5	-	3708	14	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	-10	513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	141.521403654386	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCGTTCTGAGAACAATG	NA	False	NA	-13	True	TATAAA	-15	NA	114131850	114079739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104844_114108431_114108536_114127706_114127748_114131724
ES.26773.94	chr5	-	3955	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	1	513	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCGTTCTGAGAACAATG	NA	False	NA	-13	True	TATAAA	-15	NA	114131954	114079739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
ES.26773.96	chr5	-	3927	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-8080	513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.989070961921	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCGTTCTGAGAACAATG	NA	False	NA	-13	True	TATAAA	-15	NA	114112897	114079739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098828_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114112650
ES.26773.98	chr5	-	4583	7	ISM	ENSMUSG00000042121.17	ENSMUST00000077689.14	3164	14	30640	-512	7653	512	intron_retention	FALSE	canonical	3	351	junction_6	35.4373469034514	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCGTTCTGAGAACAAT	NA	False	NA	-14	True	TATAAA	-14	NA	114097164	114079740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444
ES.26774.1	chr5	+	157	1	Intergenic	novelGene_22320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTTT	7196	False	NA	NA	False	NA	NA	NA	114139415	114139572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114139400_114139600
ES.26775.1	chr5	+	1708	3	Antisense	novelGene_ENSMUSG00000042078.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCTGGCTTGGCTGTGC	5207	False	NA	NA	False	NA	NA	NA	114181120	114198630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114181180_114196575_114196674_114197079
ES.26776.1	chr5	+	1884	1	Antisense	novelGene_ENSMUSG00000042078.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAACTAACATCA	NA	False	NA	NA	False	NA	NA	NA	114201443	114203327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114201400_114203300
ES.26777.1	chr5	+	3776	14	NIC	ENSMUSG00000029592.12	novel	652	4	NA	NA	-27	-1209	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.5620693233875	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCGGTGCTTTAGTCCT	NA	False	NA	13	True	AATAAA	-24	NA	114203494	114261572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114203830_114224730_114224981_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.10	chr5	+	2065	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	2	2537	2	1087	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGCCTTTGTTTCCC	NA	False	NA	NA	False	ATTAAA	-17	NA	114238377	114260244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.11	chr5	+	3756	12	ISM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	2	1217	2	-1217	intron_retention	FALSE	canonical	3	37	junction_5	7.4965556829412	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCAAGTGCGGTGCT	NA	False	NA	5	True	AATAAA	-16	NA	114238377	114261564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092
ES.26777.12	chr5	+	4079	12	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	2	-1793	intron_retention	FALSE	canonical	0	0	junction_6	20.13713316814	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCTTCTGGTCTAAGG	NA	False	NA	17	True	ATTAAA	-19	NA	114238377	114260988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249976_114250947_114251043_114252634_114252788_114257099_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.13	chr5	+	5906	11	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	4	-1214	intron_retention	FALSE	canonical	3	40	junction_1	6.54522726878143	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAAGTGCGGTGCTTTA	NA	False	NA	8	True	AATAAA	-19	NA	114238379	114261567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114240554_114241704_114241888_114243808_114243913_114249177_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.14	chr5	+	3108	13	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	18	-1802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.0545305104108	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAAACTGACTCTTCT	NA	False	NA	8	True	ATTAAA	-10	NA	114238393	114260979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257299_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.15	chr5	+	3245	12	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-18	-1796	intron_retention	FALSE	canonical	3	37	junction_5	7.52955608758133	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGACTCTTCTGGTCTA	NA	False	NA	14	True	ATTAAA	-16	NA	114238402	114260985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.16	chr5	+	2920	14	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-4	-1796	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.5912112594816	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGACTCTTCTGGTCTA	NA	False	NA	14	True	ATTAAA	-16	NA	114238416	114260985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114252634_114252788_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.17	chr5	+	2681	13	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	154	1084	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.7903742265224	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAAGTGCCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	114238574	114260241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114239396_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.18	chr5	+	3426	13	NNC	ENSMUSG00000029592.12	novel	768	4	NA	NA	156	-1796	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7667042888911	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGACTCTTCTGGTCTA	NA	False	NA	14	True	ATTAAA	-16	NA	114238576	114260985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114239396_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.19	chr5	+	2399	13	NNC	ENSMUSG00000029592.12	novel	768	4	NA	NA	158	1084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0118009135036	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAAGTGCCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	114238578	114260241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114239115_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.2	chr5	+	3241	2	FSM	ENSMUSG00000029592.12	ENSMUST00000160164.2	305	2	-278	-2658	11	147	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTAGTCTCATAATTT	NA	False	NA	NA	False	NA	NA	NA	114203532	114227674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114203830_114224730
ES.26777.20	chr5	+	4144	13	NNC	ENSMUSG00000029592.12	novel	768	4	NA	NA	161	-1209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9973445638494	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCGGTGCTTTAGTCCT	NA	False	NA	13	True	AATAAA	-24	NA	114238581	114261572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114239624_114240532_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.21	chr5	+	3631	11	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-1306	-1213	intron_retention	FALSE	canonical	3	37	junction_4	7.45922247958861	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTGCGGTGCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	114240466	114261568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.22	chr5	+	1399	1	Intergenic	novelGene_22323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	4216	False	NA	NA	False	NA	NA	NA	114252490	114253889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114252500_114253900
ES.26777.23	chr5	+	2000	6	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	8136	-1798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5536539825618	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGACTCTTCTGGTC	9050	False	NA	12	True	ATTAAA	-14	NA	114257324	114260983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114257417_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.3	chr5	+	184	1	Intergenic	novelGene_22322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTTTTTTATATAGA	NA	False	NA	NA	False	NA	NA	NA	114233443	114233627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114233400_114233600
ES.26777.4	chr5	+	2854	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	-40	1790	-40	-1790	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTGGTCTAAGGTTT	NA	False	NA	20	True	ATTAAA	-22	NA	114238335	114260991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.5	chr5	+	3247	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-21	-1375	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGATGGCTCCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	114238354	114261406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.6	chr5	+	4451	11	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	-20	-1798	intron_retention	FALSE	canonical	3	40	junction_1	6.55820097282784	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGACTCTTCTGGTC	NA	False	NA	12	True	ATTAAA	-14	NA	114238355	114260983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.7	chr5	+	3396	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	-2	1210	-2	-1210	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCGGTGCTTTAGTCC	NA	False	NA	12	True	AATAAA	-23	NA	114238373	114261571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26777.9	chr5	+	2998	13	NNC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	2	-1802	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.5363528973245	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAAACTGACTCTTCT	NA	False	NA	8	True	ATTAAA	-10	NA	114238377	114260979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250749_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ES.26778.1	chr5	-	2289	9	NNC	ENSMUSG00000042078.15	novel	1682	15	NA	NA	-72	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.11861912526021	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGGGATTTAAATCTGG	NA	False	NA	0	True	ATTAAA	-19	NA	114181014	114165023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114166526_114168157_114168248_114169621_114169671_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866
ES.26778.10	chr5	-	799	4	ISM	ENSMUSG00000042078.15	ENSMUST00000149480.2	666	5	-101	3243	-101	-3243	5prime_fragment	FALSE	canonical	3	12	junction_3	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	114181043	114176254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114176674_114179884_114179959_114180248_114180378_114180866
ES.26778.11	chr5	-	1010	2	NNC	ENSMUSG00000042078.15	novel	3379	16	NA	NA	177	-22221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATCTTGAGAG	NA	False	NA	NA	False	NA	NA	NA	114229251	114214815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114215787_114229212
ES.26778.12	chr5	-	2166	2	Antisense	novelGene_ENSMUSG00000029592.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTCAGTAACTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	114218639	114216253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_114218160_114218379
ES.26778.13	chr5	-	207	1	Intergenic	novelGene_22321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAAGCCTGACTGGA	NA	False	NA	NA	False	NA	NA	NA	114218370	114218163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114218200_114218400
ES.26778.14	chr5	-	3817	1	Antisense	novelGene_ENSMUSG00000029592.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAGTTTAATTATTA	NA	False	NA	NA	False	AATAAA	-8	NA	114225194	114221377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_114221400_114225200
ES.26778.15	chr5	-	1952	1	Antisense	novelGene_ENSMUSG00000029592.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAGCTAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	114228283	114226331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_114226300_114228300
ES.26778.16	chr5	-	2368	1	NIC	ENSMUSG00000042078.15	novel	3379	16	NA	NA	158	-34308	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	114229270	114226902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114226900_114229300
ES.26778.2	chr5	-	3257	17	NIC	ENSMUSG00000042078.15	novel	3379	16	NA	NA	31	-55	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	7.68826215734089	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATGGGATTTAAATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	114229397	114165025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114203847_114204015_114229212
ES.26778.3	chr5	-	2972	16	NNC	ENSMUSG00000042078.15	novel	3379	16	NA	NA	-782	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	7.55836549056004	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATGGGATTTAAATCT	NA	False	NA	-2	True	ATTAAA	-17	NA	114204061	114165025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114203994
ES.26778.4	chr5	-	2231	8	NIC	ENSMUSG00000042078.15	novel	1682	15	NA	NA	-113	-56	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	6.49018096662888	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTATGGGATTTAAATC	NA	False	NA	-3	True	ATTAAA	-16	NA	114181055	114165026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180866
ES.26778.8	chr5	-	1799	16	FSM	ENSMUSG00000042078.15	ENSMUST00000058472.13	3379	16	351	1229	148	-14	multi-exon	FALSE	canonical	1	1	junction_9	7.27552976307109	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTTGTGTCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	114229280	114166199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114229212
ES.26779.1	chr5	+	2980	9	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	-3271	0	intron_retention	FALSE	non_canonical	0	0	junction_2	310.719100434782	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGTGCCGACTATTCTT	NA	False	NA	21	True	AATAAA	-17	NA	114265175	114277382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114265396_114265436_114266380_114268612_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.10	chr5	+	3214	5	NIC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	51	-4	intron_retention	FALSE	canonical	3	427	junction_1	142.82419262856	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGGCGGTGTGCCGAC	NA	False	NA	14	True	AATAAA	-10	NA	114268497	114277375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274497_114275213
ES.26779.11	chr5	+	1729	6	NIC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	54	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	293.578337075473	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268500	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114268687_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.12	chr5	+	1421	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	108	456	108	-451	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAGCTTCCTGATCAC	NA	False	NA	NA	False	NA	NA	NA	114268554	114276928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.13	chr5	+	3050	5	ISM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	-13	3	-13	0	intron_retention	FALSE	canonical	3	690	junction_3	32.9345942741064	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCGGTGTGCCGACTATT	NA	False	NA	18	True	AATAAA	-14	NA	114268973	114277379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213
ES.26779.14	chr5	+	2151	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	-13	-2	-13	0	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114268973	114277384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.15	chr5	+	1905	7	NNC	ENSMUSG00000029591.15	novel	2136	6	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	266.406331256097	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268994	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114269162_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.16	chr5	+	3595	4	ISM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	157	5	-146	-2	intron_retention	FALSE	canonical	3	690	junction_3	37.9853773034952	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114269143	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407
ES.26779.17	chr5	+	2253	5	NIC	ENSMUSG00000029591.15	novel	2136	6	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	704	junction_4	27.994419086668	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGTGCCGACTATTCT	NA	False	NA	20	True	AATAAA	-16	NA	114269253	114277381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114269575_114270241_114270338_114273924_114274497_114275213_114275393_114276296
ES.26779.18	chr5	+	3288	2	ISM	ENSMUSG00000029591.15	ENSMUST00000143455.6	792	5	-5	3200	-5	0	5prime_fragment	FALSE	canonical	3	739	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	114269284	114273239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114269575_114270241
ES.26779.19	chr5	+	3359	4	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	2715	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	331.868782636886	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114272855	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114273176_114273279_114274608_114274762_114275393_114276296
ES.26779.2	chr5	+	2010	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	-24	-1	-24	1	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCGACTATTCTTCAG	NA	False	NA	24	True	AATAAA	-20	NA	114268422	114277385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ES.26779.3	chr5	+	2354	6	NIC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	16	0	intron_retention	FALSE	canonical	3	427	junction_1	128.365727513227	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114268462	114277384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274497_114275213_114275393_114276296
ES.26779.4	chr5	+	4796	1	FSM	ENSMUSG00000029591.15	ENSMUST00000200479.2	3099	1	-1663	-34	31	34	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGAAAGGACAGGGACT	NA	False	NA	NA	False	NA	NA	NA	114268477	114273273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114268500_114273300
ES.26779.5	chr5	+	2348	6	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	32	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	297.754664111244	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268478	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114268687_114269362_114269575_114270241_114270338_114273924_114274497_114275213_114275393_114276296
ES.26779.6	chr5	+	2024	7	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	278.796022608326	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268478	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274101_114274407_114274497_114275213_114275393_114276296
ES.26779.7	chr5	+	3508	5	NIC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	41	-2	intron_retention	FALSE	canonical	3	427	junction_1	138.635087550014	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268487	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114268687_114269379_114270338_114273924_114274023_114274407_114274497_114275213
ES.26779.8	chr5	+	2883	6	NNC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	42	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	293.077873610411	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCGGTGTGCCGACTA	NA	False	NA	16	True	AATAAA	-12	NA	114268488	114277377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274608_114274762_114275393_114276296
ES.2678.1	chr10	-	1258	6	NIC	ENSMUSG00000071324.12	novel	669	4	NA	NA	30	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.89736659610103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAAAAGTAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	41894346	41862619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_41863032_41869034_41869225_41876325_41876495_41884648_41884722_41887763_41888020_41894188
ES.2678.2	chr10	-	1118	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	8	9	8	-9	multi-exon	FALSE	canonical	3	5	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAACGAGAATCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	41894368	41875812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41876495_41887763_41888020_41894188
ES.26780.1	chr5	-	2496	5	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	224.701329546578	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	8011	False	NA	-2	True	AATAAA	-22	NA	114266246	114261986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114263792_114263920_114265390_114265434_114265831_114266143
ES.26780.11	chr5	-	2685	3	NIC	ENSMUSG00000044339.13	novel	899	4	NA	NA	11	2	intron_retention	FALSE	canonical	3	267	junction_2	145	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATTTGGGGGGGGGT	7989	False	NA	-9	True	AATAAA	-15	NA	114266268	114261993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114262316_114263592_114265831_114266143
ES.26780.13	chr5	-	3021	2	ISM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	-14	0	-14	0	intron_retention	FALSE	canonical	3	557	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	7964	False	NA	-11	True	AATAAA	-13	NA	114266293	114261995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114262316_114263592
ES.26780.14	chr5	-	1141	5	NNC	ENSMUSG00000044339.13	novel	899	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	222.369484192413	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	7984	False	NA	-11	True	AATAAA	-13	NA	114266273	114261995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114263792_114263920_114264169_114265586_114265831_114266143
ES.26780.16	chr5	-	2725	4	NNC	ENSMUSG00000044339.13	novel	899	4	NA	NA	-2533	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	235.11179373982	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	5445	False	NA	-11	True	AATAAA	-13	NA	114268812	114261995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114263792_114263920_114265831_114268516
ES.26780.17	chr5	-	950	1	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	3291	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTGTATTTGGGGGGG	8217	False	NA	-12	True	AATAAA	-12	NA	114262946	114261996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114262000_114262900
ES.26780.18	chr5	-	3938	1	Genic_Genomic	ENSMUSG00000044339.13	novel	NA	NA	NA	NA	-2552	773	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGGAAGGGGAGA	5426	False	NA	NA	False	NA	NA	NA	114268831	114264893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_114264900_114268800
ES.26780.19	chr5	-	1043	2	ISM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	16	2912	16	759	5prime_fragment	FALSE	canonical	3	267	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACAAAATTTTAA	7994	False	NA	NA	False	NA	NA	NA	114266263	114264907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114265831_114266143
ES.26780.2	chr5	-	940	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	-33	-8	-33	-1	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7945	False	NA	-3	True	AATAAA	-21	NA	114266312	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
ES.26780.3	chr5	-	1056	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7951	False	NA	-3	True	AATAAA	-21	NA	114266306	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
ES.26780.4	chr5	-	2867	5	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2523	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_2	235.610908066668	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	5455	False	NA	-3	True	AATAAA	-21	NA	114268802	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114265396_114265436_114265831_114267171_114267228_114268516
ES.26780.6	chr5	-	1123	5	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2533	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	266.303750442986	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	5445	False	NA	-3	True	AATAAA	-21	NA	114268812	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114267171_114267228_114268516
ES.26780.7	chr5	-	1066	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2532	-1	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	5446	False	NA	-3	True	AATAAA	-21	NA	114268811	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
ES.26780.8	chr5	-	2651	4	NNC	ENSMUSG00000044339.13	novel	899	4	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_2	225.449674108337	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGGGGGGGTGTGTGC	7988	False	NA	-3	True	AATAAA	-21	NA	114266269	114261987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114262316_114263592_114265396_114265436_114265831_114266143
ES.26781.1	chr5	+	8639	53	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-3440	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.2282092291976	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	NA	False	NA	9	True	AATAAA	-19	NA	114281155	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114281298_114303569_114304202_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.10	chr5	+	8523	51	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	13.2593363333162	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	NA	False	NA	7	True	AATAAA	-17	NA	114313966	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.11	chr5	+	4834	1	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	1	-9598	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114313967	114318801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114314000_114318800
ES.26781.13	chr5	+	8001	51	NNC	ENSMUSG00000042010.17	novel	676	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	14.937416108551	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	NA	False	NA	7	True	AATAAA	-17	NA	114313989	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350812_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.14	chr5	+	5065	36	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	23	-17810	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	6.55239479511273	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTGCTTCTGGG	NA	False	NA	NA	False	NA	NA	NA	114313989	114369209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775
ES.26781.15	chr5	+	8152	52	NNC	ENSMUSG00000042010.17	novel	676	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	14.7998046476503	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	NA	False	NA	9	True	AATAAA	-19	NA	114313989	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368745_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380076_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.17	chr5	+	7981	52	NNC	ENSMUSG00000042010.17	novel	676	5	NA	NA	182	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_49	13.6499320842787	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	NA	False	NA	6	True	AATAAA	-16	NA	114314148	114388819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386628_114386816_114386935_114387073_114387554
ES.26781.18	chr5	+	7379	52	NNC	ENSMUSG00000042010.17	novel	506	2	NA	NA	7538	-730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9611698558793	117	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTTTTGTGATGAGGCT	NA	False	NA	NA	False	AGTAAA	-37	NA	114321504	114388086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114321755_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.19	chr5	+	8071	52	NNC	ENSMUSG00000042010.17	novel	506	2	NA	NA	7579	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9611698558793	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	NA	False	NA	6	True	AATAAA	-16	NA	114321545	114388819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114321755_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.2	chr5	+	8620	53	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-3076	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2282092291976	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	NA	False	NA	7	True	AATAAA	-17	NA	114281519	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114281645_114303569_114304202_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.20	chr5	+	8123	53	NNC	ENSMUSG00000042010.17	novel	506	2	NA	NA	7592	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0360513512254	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGGCCTTGATTTAT	NA	False	NA	8	True	AATAAA	-18	NA	114321558	114388821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114321755_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114349698_114349762_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.21	chr5	+	7943	52	NNC	ENSMUSG00000042010.17	novel	506	2	NA	NA	7830	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9611698558793	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	NA	False	NA	9	True	AATAAA	-19	NA	114321796	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114321875_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.22	chr5	+	7879	52	NNC	ENSMUSG00000042010.17	novel	506	2	NA	NA	7950	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.6234026884965	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	NA	False	NA	7	True	AATAAA	-17	NA	114321916	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114321934_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350812_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.23	chr5	+	6105	43	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-9841	-620	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	13.6555454999972	117	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGGCCCTAGTGAGTCA	4646	False	NA	NA	False	AATAAA	-17	NA	114327998	114388196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368909_114378686_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386788_114386935_114387073_114387554
ES.26781.24	chr5	+	7779	50	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-9830	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	14.4925263308448	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTTCTGGCCTTGATT	4657	False	NA	5	True	AATAAA	-15	NA	114328009	114388818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114349698_114349762_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.25	chr5	+	7019	49	ISM	ENSMUSG00000042010.17	ENSMUST00000031583.15	8482	52	24509	617	-9752	-617	3prime_fragment	FALSE	canonical	3	18	junction_9	13.1770627470195	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCCTAGTGAGTCAGGA	4735	False	NA	NA	False	AATAAA	-20	NA	114328087	114388199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.26	chr5	+	7638	49	ISM	ENSMUSG00000042010.17	ENSMUST00000031583.15	8482	52	24509	-2	-9752	2	3prime_fragment	FALSE	canonical	3	18	junction_9	13.1770627470195	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTTCTGGCCTTGATT	4735	False	NA	5	True	AATAAA	-15	NA	114328087	114388818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.27	chr5	+	7191	45	ISM	ENSMUSG00000042010.17	ENSMUST00000031583.15	8482	52	26553	-2	-7708	2	3prime_fragment	FALSE	canonical	3	18	junction_5	13.579350512104	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTTCTGGCCTTGATT	6779	False	NA	5	True	AATAAA	-15	NA	114330131	114388818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.28	chr5	+	7073	43	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-4350	0	intron_retention	FALSE	non_canonical	0	0	junction_13	14.6595530058411	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTTCTGGCCTTGA	NA	False	NA	3	True	AATAAA	-13	NA	114333489	114388816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351464_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.3	chr5	+	8684	54	NNC	ENSMUSG00000042010.17	novel	8788	53	NA	NA	163	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	15.6790976992804	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	NA	False	NA	6	True	AATAAA	-16	NA	114284758	114388819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114284887_114303569_114304202_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334882_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114349698_114349762_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.31	chr5	+	4987	33	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	10972	623	10972	-619	3prime_fragment	FALSE	canonical	3	20	junction_6	14.6415504643463	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCCCTAGTGAGTCAG	NA	False	NA	NA	False	AATAAA	-18	NA	114348811	114388197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.32	chr5	+	4818	27	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	17775	1	17775	-1	3prime_fragment	FALSE	canonical	3	23	junction_6	15.5833794786731	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	NA	False	NA	6	True	AATAAA	-16	NA	114355614	114388819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.33	chr5	+	4074	20	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	26896	-2	-21658	0	3prime_fragment	FALSE	canonical	3	23	junction_1	16.6049086624935	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	7891	False	NA	9	True	AATAAA	-19	NA	114364735	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.34	chr5	+	3150	15	NNC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-15198	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.9802198104393	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCTGGCCTTGATTT	NA	False	NA	6	True	AATAAA	-16	NA	114371195	114388819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386628_114386788_114386935_114387073_114387554
ES.26781.35	chr5	+	5355	7	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-6690	-2	intron_retention	FALSE	canonical	3	34	junction_1	19.9116102367996	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAAGCTTCTGGCCTT	753	False	NA	1	True	AATAAA	-11	NA	114379703	114388814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386816_114386935_114387073_114387554
ES.26781.36	chr5	+	2257	8	ISM	ENSMUSG00000042010.17	ENSMUST00000143276.2	6680	41	44703	0	-3851	0	3prime_fragment	FALSE	canonical	3	34	junction_1	18.4457284475074	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	1709	False	NA	7	True	AATAAA	-17	NA	114382542	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.37	chr5	+	3901	1	NIC	ENSMUSG00000042010.17	novel	8788	53	NA	NA	-1472	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	4088	False	NA	9	True	AATAAA	-19	NA	114384921	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114384900_114388800
ES.26781.38	chr5	+	2000	2	NIC	ENSMUSG00000042010.17	novel	6680	41	NA	NA	-55	0	intron_retention	FALSE	canonical	3	86	junction_1	0	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	5505	False	NA	7	True	AATAAA	-17	NA	114386338	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114387073_114387554
ES.26781.39	chr5	+	1729	3	NIC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	-53	0	intron_retention	FALSE	canonical	3	58	junction_1	14	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTTCTGGCCTTGA	5507	False	NA	3	True	AATAAA	-13	NA	114386340	114388816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114386380_114386644_114387073_114387554
ES.26781.4	chr5	+	8807	53	NNC	ENSMUSG00000042010.17	novel	8482	52	NA	NA	5489	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2282092291976	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTGGCCTTGATTTA	811	False	NA	7	True	AATAAA	-17	NA	114290084	114388820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114290397_114303569_114304202_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.5	chr5	+	208	1	Intergenic	novelGene_22326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCACCTGAAACT	NA	False	NA	NA	False	AAAAAG	-16	NA	114302822	114303030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114302800_114303000
ES.26781.6	chr5	+	264	1	Intergenic	novelGene_22327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAATCCACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	114307098	114307362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114307100_114307400
ES.26781.7	chr5	+	8154	52	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	13.4690326470011	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	NA	False	NA	9	True	AATAAA	-19	NA	114313962	114388822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26781.9	chr5	+	8207	53	NNC	ENSMUSG00000042010.17	novel	676	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.6088548166259	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTTCTGGCCTTGA	NA	False	NA	3	True	AATAAA	-13	NA	114313966	114388816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114349698_114349762_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
ES.26782.1	chr5	-	180	1	Intergenic	novelGene_22324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGTGGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	114288602	114288422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114288400_114288600
ES.26783.1	chr5	-	207	1	Intergenic	novelGene_22325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAACAAACGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	114297616	114297409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114297400_114297600
ES.26784.1	chr5	-	176	1	Intergenic	novelGene_22328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	114313408	114313232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114313200_114313400
ES.26785.1	chr5	-	4180	4	NNC	ENSMUSG00000042002.12	novel	3016	10	NA	NA	300	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.07106781186548	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114400881	114392224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114393812_114394619_114395199_114396568_114397191_114399489
ES.26785.2	chr5	-	3050	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	-35	1	-35	-1	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGACTCAGTGTGG	NA	False	NA	-3	True	AATAAA	-12	NA	114411903	114392225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
ES.26785.3	chr5	-	4786	9	NIC	ENSMUSG00000042002.12	novel	3016	10	NA	NA	-23	-1	intron_retention	FALSE	canonical	2	4	junction_3	3.80788655293195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGACTCAGTGTGG	NA	False	NA	-3	True	AATAAA	-12	NA	114411833	114392225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114401216_114411033_114411123_114411748
ES.26785.4	chr5	-	4181	8	NIC	ENSMUSG00000042002.12	novel	3016	10	NA	NA	-29	-2	intron_retention	FALSE	canonical	2	4	junction_2	4.20883424647321	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTGTGACTCAGTGTG	NA	False	NA	-4	True	AATAAA	-11	NA	114411839	114392226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114395013_114396568_114396777_114397810_114397908_114398410_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
ES.26786.1	chr5	+	182	1	Intergenic	novelGene_22329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	6452	False	NA	NA	False	NA	NA	NA	114457313	114457495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114457300_114457500
ES.26787.1	chr5	+	2082	19	ISM	ENSMUSG00000066952.12	ENSMUST00000202006.4	4631	31	23176	1232	-18698	24	3prime_fragment	FALSE	canonical	0	0	junction_2	1.53256824712597	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTCAACCCGGCTGCC	NA	False	NA	NA	False	AGTAAA	-20	NA	114476177	114501405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114476315_114480168_114480264_114483951_114483999_114485457_114485539_114486420_114486527_114487580_114487699_114489697_114489812_114491886_114491964_114493252_114493322_114494989_114495075_114495979_114496140_114496951_114497036_114497571_114497666_114497804_114497861_114498545_114498682_114499103_114499175_114499287_114499386_114500169_114500270_114501051
ES.26787.2	chr5	+	2932	11	NNC	ENSMUSG00000066952.12	novel	4631	31	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_2	1.68522995463527	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGCCAAACTCATTCATA	NA	False	NA	NA	False	AATAAA	-24	NA	114494915	114503419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114495075_114495979_114496140_114496951_114497036_114497571_114497666_114497804_114497861_114498545_114498682_114499103_114499175_114499287_114499386_114500169_114500270_114501051_114501124_114501517
ES.26788.1	chr5	-	448	1	Intergenic	novelGene_22330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114480966	114480518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114480500_114481000
ES.26789.1	chr5	-	3111	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	-8	0	-8	0	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTTCTGGTCTTTTCG	NA	False	NA	2	True	AATAAA	-24	NA	114518577	114501627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ES.26789.5	chr5	-	5442	5	NIC	ENSMUSG00000001098.16	novel	3103	7	NA	NA	2	-7	intron_retention	FALSE	canonical	3	101	junction_1	17.612140698961	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCACGCCGCCTTCTGGT	NA	False	NA	-5	True	AATAAA	-17	NA	114518542	114501634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114505466_114506402_114506456_114507001_114508290_114512956_114513171_114518486
ES.26789.6	chr5	-	4433	6	NIC	ENSMUSG00000001098.16	novel	3103	7	NA	NA	5	-7	intron_retention	FALSE	canonical	3	95	junction_3	17.8997206682116	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCACGCCGCCTTCTGGT	NA	False	NA	-5	True	AATAAA	-17	NA	114518564	114501634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ES.26789.8	chr5	-	1128	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	42	1933	17	122	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAGTAGATTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	114518527	114503560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ES.2679.1	chr10	-	2943	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-168	-1581	-168	1581	mono-exon	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTATGATTGCAATAAGC	2294	False	NA	NA	False	ATTAAA	-41	NA	41931470	41928527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41928500_41931500
ES.2679.2	chr10	-	2834	2	Genic_Genomic	ENSMUSG00000085666.4	novel	1194	1	NA	NA	-127	1572	multi-exon	FALSE	non_canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAAAACTTTTATGATT	2335	False	NA	NA	False	ATTAAA	-32	NA	41931429	41928536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_41929257_41929315
ES.2679.3	chr10	-	2809	2	Genic_Genomic	ENSMUSG00000085666.4	novel	1194	1	NA	NA	-125	1572	multi-exon	FALSE	canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAAAACTTTTATGATT	2337	False	NA	NA	False	ATTAAA	-32	NA	41931427	41928536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_41931176_41931257
ES.2679.4	chr10	-	2667	2	Genic_Genomic	ENSMUSG00000085666.4	novel	1194	1	NA	NA	-137	1555	multi-exon	FALSE	non_canonical	0	0	junction_1	0	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	2325	False	NA	NA	False	ATTAAA	-15	NA	41931439	41928553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_41930784_41931002
ES.2679.5	chr10	-	2754	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-126	-1434	-126	1434	mono-exon	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCATGAGGACCCTCTG	2336	False	NA	NA	False	TTTAAA	-16	NA	41931428	41928674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41928700_41931400
ES.2679.6	chr10	-	2512	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-127	-1191	-127	1191	mono-exon	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGGGCTTTCTTTTTCC	2335	False	NA	NA	False	NA	NA	NA	41931429	41928917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41928900_41931400
ES.2679.7	chr10	-	2250	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-129	-927	-129	927	mono-exon	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGGCTGCTCATG	2333	False	NA	NA	False	NA	NA	NA	41931431	41929181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41929200_41931400
ES.2679.8	chr10	-	1682	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-167	-321	-167	321	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTATAGTTGATTCT	2295	False	NA	NA	False	AAAAAG	-10	NA	41931469	41929787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_41929800_41931500
ES.26790.1	chr5	+	3698	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	-6	1502	-6	-1501	multi-exon	TRUE	canonical	3	241	junction_19	27.3486858419916	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCCTGGTCTCGCTA	NA	False	NA	NA	False	NA	NA	NA	114518661	114557728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.10	chr5	+	4883	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	59.1746612372591	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCTCTGTTCTGGTTTC	NA	False	NA	18	True	ATTAAA	-18	NA	114518887	114559227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.11	chr5	+	4956	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	60.3013920860634	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518887	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557549
ES.26790.12	chr5	+	4994	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.328956483581	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACGACGGCTCTGTTCT	NA	False	NA	12	True	ATTAAA	-12	NA	114518887	114559221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544203_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.13	chr5	+	1626	12	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	221	20954	2	8056	5prime_fragment	FALSE	canonical	3	255	junction_8	26.3416836500756	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAAATAATTCT	NA	False	NA	NA	False	NA	NA	NA	114518888	114538276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850
ES.26790.14	chr5	+	4932	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.1609666461613	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518888	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114520555_114520605_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.17	chr5	+	1969	14	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	222	18226	3	-8192	5prime_fragment	FALSE	canonical	3	252	junction_13	26.4608676122477	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGCAGTGTTGGATTG	NA	False	NA	NA	False	NA	NA	NA	114518889	114541004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582
ES.26790.2	chr5	+	5197	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	-4	1	-4	0	multi-exon	FALSE	canonical	3	241	junction_19	27.3486858419916	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGTTCTGGTTTCTA	NA	False	NA	20	True	ATTAAA	-20	NA	114518663	114559229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.20	chr5	+	5008	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	59.6940300958223	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518890	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545749_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.21	chr5	+	4678	26	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	61.3345710020051	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518890	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.23	chr5	+	4891	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	59.9192414895739	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518890	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525514_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.24	chr5	+	4848	27	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	78.9704180252132	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACGACGGCTCTGTTCT	NA	False	NA	12	True	ATTAAA	-12	NA	114518890	114559221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544832_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.25	chr5	+	5128	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.4089775353606	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518890	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114526963_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.26	chr5	+	6817	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	241	junction_18	27.1467630770619	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518890	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.27	chr5	+	4880	27	FSM	ENSMUSG00000029577.14	ENSMUST00000130169.8	4888	27	4	4	-3	-4	multi-exon	FALSE	canonical	0	0	junction_7	60.982985792867	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518890	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.3	chr5	+	7310	26	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-3	-6	intron_retention	FALSE	canonical	0	0	junction_14	62.5420690415659	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518664	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.31	chr5	+	5085	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	79.4569531721888	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518891	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540878_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557545
ES.26790.33	chr5	+	5067	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	78.2530102148266	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518891	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545632_114545835_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.35	chr5	+	3319	26	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-2	-1287	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	62.0074060092825	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGTGAGGCTTTCTT	NA	False	NA	2	True	NA	NA	NA	114518891	114557942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544269_114546222_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.39	chr5	+	5628	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	226	-660	0	660	multi-exon	FALSE	canonical	3	241	junction_19	27.3486858419916	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCTTTCTTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	114518893	114559890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.40	chr5	+	5060	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	60.1561297386253	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518896	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550812_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.41	chr5	+	4916	29	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.2436490180981	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518898	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114518945_114518987_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.43	chr5	+	5238	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	7	-4	intron_retention	FALSE	canonical	3	241	junction_18	26.4826894449315	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114518900	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.44	chr5	+	5059	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	7	-3	intron_retention	FALSE	canonical	3	241	junction_18	27.6507433800152	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518900	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.45	chr5	+	6369	26	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	8	-1287	intron_retention	FALSE	canonical	3	241	junction_18	27.6820230474581	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGTGAGGCTTTCTT	NA	False	NA	2	True	NA	NA	NA	114518901	114557942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598
ES.26790.46	chr5	+	5008	29	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.9677049181524	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGACGGCTCTGTTCTGGT	NA	False	NA	15	True	ATTAAA	-15	NA	114518901	114559224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114519942_114519997_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.49	chr5	+	7158	10	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	9	7447	intron_retention	FALSE	canonical	3	255	junction_8	25.8117592112635	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	114518902	114537667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114536575_114536822
ES.26790.5	chr5	+	4932	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	57.3485002428986	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGTTCTGGTTTCTA	NA	False	NA	20	True	ATTAAA	-20	NA	114518886	114559229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525196_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.50	chr5	+	5025	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.4089775353606	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518903	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527054_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.51	chr5	+	4556	26	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	62.0074060092825	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114518933	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544267_114546222_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.52	chr5	+	4729	27	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	3533	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.3513120187462	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114522426	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114522460_114525154_114525340_114525441_114525563_114526783_114526844_114527155_114527231_114528450_114528548_114530158_114530241_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.53	chr5	+	179	1	Intergenic	novelGene_22331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCACCCATTTAGG	NA	False	NA	NA	False	NA	NA	NA	114522918	114523097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114522900_114523100
ES.26790.54	chr5	+	4735	26	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	6484	5	6258	-4	3prime_fragment	FALSE	canonical	3	241	junction_17	27.1995882321773	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACGGCTCTGTTCTGGTT	NA	False	NA	16	True	ATTAAA	-16	NA	114525151	114559225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.56	chr5	+	2184	1	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	-1359	7449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAGAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114535485	114537669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114535500_114537700
ES.26790.57	chr5	+	2338	7	ISM	ENSMUSG00000029577.14	ENSMUST00000196651.5	3879	18	13380	6	9439	-6	3prime_fragment	FALSE	canonical	3	248	junction_5	25.9599049818497	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGACGGCTCTGTTCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	114550224	114559223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.6	chr5	+	4866	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	59.4749835530793	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACGGCTCTGTTCTGGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	114518886	114559226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.7	chr5	+	3645	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	0	-1287	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	57.3485002428986	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGTGAGGCTTTCTT	NA	False	NA	2	True	NA	NA	NA	114518886	114557942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114519037_114522375_114522464_114525196_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26790.9	chr5	+	3687	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	220	1287	1	-1286	multi-exon	FALSE	canonical	3	241	junction_19	27.3486858419916	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTGAGGCTTTCTTC	NA	False	NA	3	True	NA	NA	NA	114518887	114557943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ES.26791.1	chr5	+	4045	2	Antisense	novelGene_ENSMUSG00000029575.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	8049	False	NA	NA	False	NA	NA	NA	114576051	114580190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114577783_114577876
ES.26792.1	chr5	-	5964	5	NIC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	12	2	intron_retention	FALSE	canonical	3	187	junction_1	15	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGGCTCATCTCTCTC	NA	False	NA	4	True	AATAAA	-38	NA	114582041	114569092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114573399_114574539_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.10	chr5	-	888	8	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	8	-16	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	88.5476926720907	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTGCCTGGAAGGAT	NA	False	NA	-14	True	AATAAA	-20	NA	114582074	114569110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574539_114574605_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.11	chr5	-	3012	9	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	13	-16	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_2	65.0825197345647	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTGCCTGGAAGGAT	NA	False	NA	-14	True	AATAAA	-20	NA	114582069	114569110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114571420_114573338_114573399_114574479_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.12	chr5	-	4936	8	NNC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	8	-16	intron_retention	FALSE	canonical	2	7	junction_1	69.4729429052661	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTGCCTGGAAGGAT	NA	False	NA	-14	True	AATAAA	-20	NA	114582074	114569110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114573399_114574479_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.13	chr5	-	6113	5	NIC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	4	-17	intron_retention	FALSE	canonical	3	7	junction_1	90.4986187739901	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAGTGCCTGGAAGGA	NA	False	NA	-15	True	AATAAA	-19	NA	114582078	114569111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114574869_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.14	chr5	-	2973	9	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	274	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	82.1975516667011	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCAGTGCCTGGAAGG	NA	False	NA	-16	True	AATAAA	-18	NA	114581779	114569112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114571420_114573338_114573399_114574479_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581683
ES.26792.15	chr5	-	1004	10	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	32	-18	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	60.6577119968381	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCAGTGCCTGGAAGG	NA	False	NA	-16	True	AATAAA	-18	NA	114582021	114569112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.16	chr5	-	5103	7	NIC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	-8	-18	intron_retention	FALSE	canonical	3	177	junction_3	16.9287723516306	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCAGTGCCTGGAAGG	NA	False	NA	-16	True	AATAAA	-18	NA	114582061	114569112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114573399_114574539_114574605_114574770_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.17	chr5	-	950	9	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	13	-18	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	84.0252008328454	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCAGTGCCTGGAAGG	NA	False	NA	-16	True	AATAAA	-18	NA	114582040	114569112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.18	chr5	-	1144	10	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	19	-19	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	79.6061291765222	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATCAGTGCCTGGAAG	NA	False	NA	-17	True	AATAAA	-17	NA	114582102	114569113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574479_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.19	chr5	-	3714	8	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	2	-20	intron_retention	FALSE	canonical	2	7	junction_2	69.5390068191066	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATCAGTGCCTGGAA	NA	False	NA	-18	True	AATAAA	-16	NA	114582080	114569114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114571420_114573338_114573399_114574479_114574605_114574770_114574869_114575110_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.2	chr5	-	4944	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-73	-3594	-5	0	multi-exon	TRUE	canonical	3	177	junction_4	16.4738506458581	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGCTCATCTCTC	NA	False	NA	2	True	AATAAA	-36	NA	114582126	114569094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.20	chr5	-	956	9	NNC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	8	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.6196453254207	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAATCAGTGCCTGGA	NA	False	NA	-19	True	AATAAA	-15	NA	114582074	114569115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114569246_114571143_114571420_114573338_114573399_114574539_114574605_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.21	chr5	-	4861	7	NNC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	5	-21	intron_retention	FALSE	canonical	2	7	junction_1	96.136043651114	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAATCAGTGCCTGGA	NA	False	NA	-19	True	AATAAA	-15	NA	114582077	114569115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114573399_114574479_114574605_114574770_114574869_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.22	chr5	-	1211	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	47	1762	8	404	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTTAGTCACCTCTGT	NA	False	NA	NA	False	TATAAA	-20	NA	114582074	114570856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.23	chr5	-	1046	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	-4	1978	-4	188	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGGCTTTCTGTGTGT	NA	False	NA	0	True	AATGAA	-23	NA	114582125	114571072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.24	chr5	-	1164	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-26	139	3	-139	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAATCCTTCCTTCTGGG	NA	False	NA	NA	False	AATATA	-18	NA	114582079	114572827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.25	chr5	-	794	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-21	504	8	-504	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGGGTCAGGCGATCT	NA	False	NA	NA	False	NA	NA	NA	114582074	114573192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.26	chr5	-	1156	2	ISM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	-72	7228	-4	-7228	5prime_fragment	FALSE	canonical	3	225	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGGGACAGTGTAAGG	NA	False	NA	NA	False	NA	NA	NA	114582125	114579916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114580884_114581936
ES.26792.27	chr5	-	2180	1	Genic_Genomic	ENSMUSG00000029575.18	novel	NA	NA	NA	NA	-4	-7257	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114582125	114579945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_114579900_114582100
ES.26792.4	chr5	-	3005	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	2	13	2	-13	multi-exon	FALSE	canonical	3	162	junction_1	19.5604032422647	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582119	114569107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.5	chr5	-	2730	6	NIC	ENSMUSG00000029575.18	novel	644	7	NA	NA	2	-13	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	82.1009135150152	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582080	114569107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114571420_114573338_114573399_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.6	chr5	-	3370	7	NIC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	6	-13	intron_retention	FALSE	canonical	3	162	junction_1	22.3190252674459	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582076	114569107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114571420_114573338_114573399_114574539_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.7	chr5	-	7148	4	NIC	ENSMUSG00000029575.18	novel	1277	8	NA	NA	-17	-13	intron_retention	FALSE	canonical	3	201	junction_1	10.1980390271856	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582099	114569107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114575937_114576581_114576676_114580821_114580884_114581936
ES.26792.8	chr5	-	2891	8	NIC	ENSMUSG00000029575.18	novel	3020	9	NA	NA	4	-13	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	69.5715752418518	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	NA	False	NA	-11	True	AATAAA	-23	NA	114582078	114569107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ES.26793.1	chr5	+	1682	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	-48	26	-11	-7	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGAAATAGTACA	NA	False	NA	NA	False	NA	NA	NA	114582318	114598626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ES.26793.2	chr5	+	1775	12	NNC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.1085826771857	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACAAAGCCTTGGGCCC	NA	False	NA	NA	False	AATAAA	-11	NA	114582346	114598643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114594990_114595095_114596955_114597110_114598103
ES.26793.4	chr5	+	8910	1	NIC	ENSMUSG00000041939.15	novel	1602	11	NA	NA	0	53	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTCTGAATGACATCA	NA	False	NA	NA	False	AAAACA	-16	NA	114582354	114591264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114582400_114591300
ES.26793.6	chr5	+	4551	10	NIC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	102	junction_9	13.8519508810087	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGCCCTGTGGGAAGG	NA	False	NA	NA	False	AATAAA	-21	NA	114582364	114598653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114597110_114598103
ES.26793.7	chr5	+	915	7	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	27	7473	27	-32	5prime_fragment	FALSE	canonical	3	117	junction_1	10.1063786238637	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTCCCCTTGAAGCGT	NA	False	NA	NA	False	GATAAA	-21	NA	114582393	114591179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
ES.26793.8	chr5	+	1696	12	NIC	ENSMUSG00000041939.15	novel	1602	11	NA	NA	33	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	51.2535425101008	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTTGGGCCCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	114582399	114598647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ES.26793.9	chr5	+	1522	9	ISM	ENSMUSG00000041939.15	ENSMUST00000125120.4	2380	10	1863	19	1851	-7	3prime_fragment	FALSE	canonical	3	9	junction_1	40.3281461884873	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGAAATAGTACA	NA	False	NA	NA	False	NA	NA	NA	114584217	114598626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ES.26794.1	chr5	-	2847	1	Intergenic	novelGene_22332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114622588	114619741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114619700_114622600
ES.26794.2	chr5	-	2053	1	Intergenic	novelGene_22333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114623575	114621522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114621500_114623600
ES.26795.1	chr5	-	170	1	Intergenic	novelGene_22334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	114625657	114625487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114625500_114625700
ES.26796.1	chr5	+	228	1	Intergenic	novelGene_22335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCAAGGCACAAGGAACC	NA	False	NA	NA	False	AAAAAG	-31	NA	114671764	114671992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114671800_114672000
ES.26797.1	chr5	+	494	1	Intergenic	novelGene_22336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114687318	114687812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114687300_114687800
ES.26797.2	chr5	+	6673	3	NNC	ENSMUSG00000086302.2	novel	473	2	NA	NA	-2031	6291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTGGTCTTGATG	NA	False	NA	NA	False	NA	NA	NA	114687318	114698368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114687430_114689551_114689777_114692031
ES.26798.1	chr5	+	5438	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-2492	-16	-2492	16	multi-exon	FALSE	canonical	3	54	junction_1	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCTGTAAGGCTGTTC	NA	False	NA	28	True	AAGAAA	-33	NA	114703584	114751297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114706486_114732401_114732529_114748887
ES.26798.2	chr5	+	3198	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-644	376	-644	-376	multi-exon	FALSE	canonical	3	54	junction_1	5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGGTCTTGCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	114705432	114750905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114706486_114732401_114732529_114748887
ES.26798.3	chr5	+	3700	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	-604	-166	-604	166	multi-exon	FALSE	canonical	3	54	junction_1	5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATCCCGTGTCTATGTG	NA	False	NA	NA	False	GATAAA	-1	NA	114705472	114751447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114706486_114732401_114732529_114748887
ES.26798.4	chr5	+	3260	4	NNC	ENSMUSG00000041930.8	novel	2930	3	NA	NA	-602	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.1108915230774	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTCTCAGCTGTGGG	NA	False	NA	10	True	AAGAAA	-15	NA	114705474	114751279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114706486_114732401_114732529_114748887_114750596_114750865
ES.26799.1	chr5	-	1175	2	Antisense	novelGene_ENSMUSG00000041930.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	6343	False	NA	NA	False	NA	NA	NA	114738488	114735917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_114736959_114738354
ES.268.1	chr1	+	1930	17	Antisense	novelGene_ENSMUSG00000037470.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAGTTGCCAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	36223497	36283352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36223570_36224916_36225049_36230608_36230694_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249145_36250469_36250568_36255212_36255394_36260299_36260408_36266566_36266698_36269739_36269822_36273887_36274023_36283149
ES.268.2	chr1	+	1948	17	Antisense	novelGene_ENSMUSG00000037470.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCCCTGCACTTCCGC	NA	False	NA	NA	False	NA	NA	NA	36223497	36283365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36223569_36224913_36225049_36230608_36230693_36231464_36231587_36234930_36235082_36236624_36236712_36240779_36240847_36241859_36241960_36247022_36247124_36249066_36249145_36250469_36250568_36255212_36255388_36260292_36260408_36266566_36266698_36269739_36269822_36273887_36274023_36283149
ES.268.3	chr1	+	184	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	36224214	36224398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36224200_36224400
ES.268.4	chr1	+	178	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGACATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	36256018	36256196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36256000_36256200
ES.268.5	chr1	+	174	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	36261270	36261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36261300_36261400
ES.268.6	chr1	+	3544	2	Antisense	novelGene_ENSMUSG00000037470.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATCCCCTTGACAACA	1685	False	NA	NA	False	NA	NA	NA	36276279	36279996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36278663_36278835
ES.268.7	chr1	+	3350	2	Antisense	novelGene_ENSMUSG00000037470.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATCCCCTTGACAACA	2011	False	NA	NA	False	NA	NA	NA	36276605	36279996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36279153_36279193
ES.2680.1	chr10	+	1953	1	Intergenic	novelGene_2042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	41954497	41956450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41954500_41956400
ES.26800.1	chr5	+	178	1	Intergenic	novelGene_22337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	114754021	114754199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114754000_114754200
ES.26801.1	chr5	+	181	1	Intergenic	novelGene_22338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	114799935	114800116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114799900_114800100
ES.26802.1	chr5	-	3079	15	NIC	ENSMUSG00000014158.13	novel	3228	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5.16117768557146	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGGGTGAGGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	114796494	114760214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
ES.26802.10	chr5	-	4523	16	NNC	ENSMUSG00000014158.13	novel	3228	16	NA	NA	45	-1	intron_retention	TRUE	canonical	0	0	junction_3	7.01237002256251	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACACAGTGAGGGTGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114796434	114760218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764755_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114779273_114779373_114782574_114782992_114796402
ES.26802.11	chr5	-	4072	3	NNC	ENSMUSG00000014158.13	novel	3228	16	NA	NA	10	-3878	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCATCCTTCACCACG	NA	False	NA	NA	False	NA	NA	NA	114796469	114778070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114778358_114779273_114782992_114796402
ES.26802.12	chr5	-	158	1	Intergenic	novelGene_22339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	114802104	114801946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114801900_114802100
ES.26802.2	chr5	-	3430	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	-2428	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.05702071979286	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGGGTGAGGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	114785388	114760214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114784280_114784360_114785186
ES.26802.3	chr5	-	3220	16	FSM	ENSMUSG00000014158.13	ENSMUST00000071968.9	3228	16	5	3	2	-1	multi-exon	FALSE	canonical	2	11	junction_12	3.23865541373096	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGGGTGAGGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	114796477	114760215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
ES.26802.5	chr5	-	3503	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	-9161	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	6.19696246156131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGGGTGAGGTTG	8310	False	NA	NA	False	AATAAA	-17	NA	114805643	114760215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114804535_114804730_114805482
ES.26802.6	chr5	-	3441	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	6.19696246156131	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGGGTGAGGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	114796448	114760215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114795676_114795924_114796402
ES.26802.7	chr5	-	3373	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.2236946422523	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGAGGGTGAGGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	114796469	114760215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114778961_114779120_114782574_114782995_114796402
ES.26802.9	chr5	-	4445	17	NNC	ENSMUSG00000014158.13	novel	3226	16	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_13	6.97764286847643	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACACAGTGAGGGTGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	114796469	114760218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114778961_114779120_114779273_114779373_114782574_114782995_114796402
ES.26803.1	chr5	+	2496	1	Intergenic	novelGene_22340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	114821446	114823942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114821400_114823900
ES.26804.1	chr5	-	2623	2	NNC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	18610	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGTGTCTGTGGCGCTT	3594	False	NA	0	True	AATAAA	-26	NA	114810359	114807461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114809642_114809916
ES.26804.10	chr5	-	1636	5	FSM	ENSMUSG00000011884.14	ENSMUST00000112214.8	944	5	-15	-677	-15	-8	multi-exon	TRUE	canonical	0	0	junction_2	605.262081663803	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCATGTGTCTGTGG	NA	False	NA	-5	True	AATAAA	-21	NA	114829017	114807466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114808651_114812114_114812247_114814396_114814460_114815681_114815741_114828819
ES.26804.2	chr5	-	1827	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	-70	5	-70	-5	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTGTCTGTGGCGC	NA	False	NA	-2	True	AATAAA	-24	NA	114829115	114807463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
ES.26804.3	chr5	-	1715	5	NNC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	-1	-6	at_least_one_novel_splicesite	TRUE	canonical	3	73	junction_1	572.213246963053	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	NA	False	NA	-3	True	AATAAA	-23	NA	114829046	114807464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114808609_114812114_114812266_114814325_114814460_114815681_114815741_114828819
ES.26804.4	chr5	-	1481	3	NNC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	15552	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	696	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	536	False	NA	-3	True	AATAAA	-23	NA	114813417	114807464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114808651_114812114_114812266_114813273
ES.26804.6	chr5	-	1778	5	NIC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	-41	-6	combination_of_known_splicesites	FALSE	canonical	3	94	junction_2	564.604452249537	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	NA	False	NA	-3	True	AATAAA	-23	NA	114829086	114807464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114808651_114812114_114812247_114814325_114814460_114815681_114815741_114828819
ES.26804.7	chr5	-	3801	5	NNC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	3	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	603.789853757083	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCATGTGTCTGTGGC	NA	False	NA	-4	True	AATAAA	-22	NA	114828999	114807465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114809365_114810736_114812266_114814325_114814460_114815681_114815741_114828819
ES.26804.8	chr5	-	1592	3	NNC	ENSMUSG00000011884.14	novel	1762	5	NA	NA	15787	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	703.5	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGCATGTGTCTGTGG	771	False	NA	-5	True	AATAAA	-21	NA	114813182	114807466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114808651_114812114_114812266_114812925
ES.26805.1	chr5	-	2244	2	Intergenic	novelGene_22341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAGAATGATTGATT	NA	False	NA	NA	False	AATAAA	-8	NA	114837770	114834713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114836730_114837542
ES.26806.1	chr5	+	135	1	Intergenic	novelGene_22342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114838473	114838608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114838500_114838600
ES.26807.1	chr5	+	177	1	Intergenic	novelGene_22343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGATTAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	114839991	114840168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114840000_114840200
ES.26808.1	chr5	+	3326	14	NNC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	-2039	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0249662491785	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114843781	114860388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114844184_114845778_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.10	chr5	+	2891	13	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	1	-305	intron_retention	FALSE	canonical	1	1	junction_2	17.2745397108641	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCGGGTTGTTATGGCT	NA	False	NA	NA	False	AATACA	-24	NA	114845880	114860083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114847274_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.11	chr5	+	4725	12	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_2	18.0165213435423	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845885	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114847274_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.12	chr5	+	2623	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	82	177	-22	-177	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGGCTCTGAGGGCTG	NA	False	NA	NA	False	AATATA	-34	NA	114845902	114860211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.13	chr5	+	2524	11	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	20.3492014585339	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGTCACTGCTGCTT	NA	False	NA	17	True	AGTAAA	-20	NA	114845925	114860390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114857639_114857826_114858185_114858330_114859168
ES.26808.14	chr5	+	5780	8	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	1581	0	intron_retention	FALSE	canonical	3	57	junction_2	4.16496563917521	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114847505	114860388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114857826_114858185_114858330_114859168
ES.26808.15	chr5	+	2380	11	NNC	ENSMUSG00000002486.16	novel	644	6	NA	NA	-1535	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4932420089069	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114847591	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114847688_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.16	chr5	+	4733	8	NNC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	-1535	-1	intron_retention	FALSE	canonical	1	1	junction_1	21.0645267146994	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114851160	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114852201_114852688_114852863_114853613_114853727_114853895_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.17	chr5	+	3522	6	NIC	ENSMUSG00000002486.16	novel	2156	8	NA	NA	590	0	intron_retention	FALSE	canonical	3	57	junction_1	3.37045990927054	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	1639	False	NA	15	True	AGTAAA	-18	NA	114853611	114860388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114853727_114853895_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.2	chr5	+	2583	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	-1	300	-1	-300	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTGTTATGGCTTGTAT	NA	False	NA	NA	False	AATACA	-29	NA	114845819	114860088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.3	chr5	+	3706	11	NIC	ENSMUSG00000002486.16	novel	3138	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	53	junction_7	4.82182538049648	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCAGGCTGTCACTGC	NA	False	NA	12	True	AGTAAA	-15	NA	114845821	114860385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114858330_114859168
ES.26808.4	chr5	+	5906	11	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1	junction_2	18.8332153388634	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845822	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114847274_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114855671_114856439_114857826_114858185_114858330_114859168
ES.26808.5	chr5	+	4760	11	NIC	ENSMUSG00000002486.16	novel	3138	12	NA	NA	16	-1	intron_retention	FALSE	canonical	2	32	junction_2	9.71802449060507	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845836	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114855671_114856439_114856522_114857639_114858330_114859168
ES.26808.6	chr5	+	3332	12	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	17	-1	intron_retention	FALSE	canonical	3	53	junction_7	4.96267056871134	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845837	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.7	chr5	+	3194	12	FSM	ENSMUSG00000002486.16	ENSMUST00000124242.5	3138	12	-54	-2	-9	2	multi-exon	FALSE	canonical	2	32	junction_2	9.39491686019186	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGTCACTGCTGCTT	NA	False	NA	17	True	AGTAAA	-20	NA	114845870	114860390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114858330_114859168
ES.26808.8	chr5	+	2611	12	NIC	ENSMUSG00000002486.16	novel	2882	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.2226813532608	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGGCTGTCACTGCTG	NA	False	NA	14	True	AGTAAA	-17	NA	114845879	114860387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114846900_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ES.26808.9	chr5	+	4297	11	NIC	ENSMUSG00000002486.16	novel	3138	12	NA	NA	1	-3	intron_retention	FALSE	canonical	2	32	junction_2	9.8	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCAGGCTGTCACTGC	NA	False	NA	12	True	AGTAAA	-15	NA	114845880	114860385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114858330_114859168
ES.26809.1	chr5	-	218	1	Intergenic	novelGene_22344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTGTTTGGTTTG	8110	False	NA	0	True	NA	NA	NA	114845471	114845253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_114845300_114845500
ES.2681.1	chr10	+	2052	1	Intergenic	novelGene_2043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAATTGATGGAACTAG	NA	False	NA	NA	False	NA	NA	NA	41990690	41992742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_41990700_41992700
ES.26810.1	chr5	+	3139	1	Antisense	novelGene_ENSMUSG00000041890.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTCAAGAAATAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	114863871	114867010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114863900_114867000
ES.26811.1	chr5	+	182	1	Antisense	novelGene_ENSMUSG00000041890.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114879222	114879404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_114879200_114879400
ES.26812.12	chr5	+	3452	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	108.429347823307	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1119	False	NA	25	True	AGTAAA	-15	NA	114913010	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924139_114924737_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.13	chr5	+	4046	14	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	5	-4	intron_retention	FALSE	canonical	3	367	junction_6	30.6339333064248	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1119	False	NA	25	True	AGTAAA	-15	NA	114913010	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.15	chr5	+	3332	14	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	5	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	113.486385806023	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1119	False	NA	25	True	AGTAAA	-15	NA	114913010	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114939716_114939878_114941617_114941686_114942289
ES.26812.16	chr5	+	5353	14	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	5	-1	intron_retention	FALSE	canonical	3	367	junction_5	29.9958577021885	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1119	False	NA	28	True	AGTAAA	-18	NA	114913010	114943882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.17	chr5	+	4173	14	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	5	-1	intron_retention	FALSE	canonical	1	2	junction_8	111.864245706372	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1119	False	NA	28	True	AGTAAA	-18	NA	114913010	114943882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935915_114935976_114936581_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.18	chr5	+	3432	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	109.914159456276	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1120	False	NA	25	True	AGTAAA	-15	NA	114913011	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937451_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.2	chr5	+	3763	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	-28	-18	-28	18	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCCATTTGCCTTTTT	818	False	NA	47	True	AGTAAA	-37	NA	114912709	114943901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.20	chr5	+	4212	13	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-5	intron_retention	FALSE	canonical	1	13	junction_6	114.592848089806	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGATTGTGAGTTTCAT	1122	False	NA	24	True	AGTAAA	-14	NA	114913013	114943878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114939878_114941617_114941686_114942289
ES.26812.21	chr5	+	3641	16	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	140.502178709877	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGATTGTGAGTTTCA	1122	False	NA	23	True	AGTAAA	-13	NA	114913013	114943877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935441_114935648_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.24	chr5	+	3474	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.926065134336	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGATTGTGAGTTTCA	1122	False	NA	23	True	AGTAAA	-13	NA	114913013	114943877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936542_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.27	chr5	+	3521	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	109.926065134336	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1122	False	NA	25	True	AGTAAA	-15	NA	114913013	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936497_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.3	chr5	+	3489	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	-119	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	108.397722884434	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	995	False	NA	25	True	AGTAAA	-15	NA	114912886	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930235_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.30	chr5	+	3364	6	ISM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	292	11163	24	-6904	5prime_fragment	FALSE	canonical	3	368	junction_1	31.3138946795189	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTTGTGAGCTGGC	1138	False	NA	NA	False	TATAAA	-15	NA	114913029	114932720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160
ES.26812.32	chr5	+	7219	3	Intergenic	novelGene_22345	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3106	False	NA	NA	False	NA	NA	NA	114914997	114922603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114917197_114917545_114918443_114918480
ES.26812.33	chr5	+	178	1	Intergenic	novelGene_22346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATGAAAAAAAAAT	3466	False	NA	NA	False	NA	NA	NA	114915357	114915535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114915400_114915500
ES.26812.34	chr5	+	7952	10	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	3269	-1	intron_retention	FALSE	canonical	1	1	junction_3	130.487121544193	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1955	False	NA	28	True	AGTAAA	-18	NA	114927374	114943882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114927415_114929324_114929469_114930160_114935648_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.35	chr5	+	2815	10	ISM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	17225	4	-3841	-4	3prime_fragment	FALSE	canonical	3	367	junction_1	30.2287574633457	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	3	True	NA	25	True	AGTAAA	-15	NA	114929962	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.36	chr5	+	6089	7	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	-1795	-4	intron_retention	FALSE	canonical	3	379	junction_2	31.7262597158183	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	2049	False	NA	25	True	AGTAAA	-15	NA	114932008	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114939878_114941617_114941686_114942289
ES.26812.37	chr5	+	4853	8	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	-1406	-8	intron_retention	FALSE	canonical	3	379	junction_2	29.4320386307028	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAAGGATTGTGAGTTT	2438	False	NA	21	True	AGTAAA	-11	NA	114932397	114943875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.38	chr5	+	5672	6	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	-571	-6	intron_retention	FALSE	canonical	3	379	junction_3	31.5379136913018	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGGATTGTGAGTTTCA	268	False	NA	23	True	AGTAAA	-13	NA	114933232	114943877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_114933809_114934894_114934977_114935913_114935976_114936581_114939878_114941617_114941686_114942289
ES.26812.39	chr5	+	3066	4	ISM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	24889	4	-5	-4	3prime_fragment	FALSE	canonical	3	412	junction_1	25.9401019444583	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	182	False	NA	25	True	AGTAAA	-15	NA	114937626	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.7	chr5	+	3442	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	146.98514432779	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATTGTGAGTTTCATT	1115	False	NA	25	True	AGTAAA	-15	NA	114913006	114943879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934893_114934977_114935913_114935970_114936578_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26812.8	chr5	+	3261	15	NNC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	109.864016132746	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGAGTTTCATTTCT	1116	False	NA	28	True	AGTAAA	-18	NA	114913007	114943882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_114913225_114924025_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ES.26813.1	chr5	-	5091	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCCTCTAGTTGGTG	NA	False	NA	1	True	AATAAA	-24	NA	114911551	114865463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.11	chr5	-	5035	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	75.7668002801448	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGGTCATGTGCC	NA	False	NA	-13	True	AATAAA	-10	NA	114911551	114865477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.12	chr5	-	4851	18	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	36	-6	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	73.7516641064967	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGGTCATGTGCC	NA	False	NA	-13	True	AATAAA	-10	NA	114911459	114865477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114911374
ES.26813.15	chr5	-	3804	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	2	795	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTTCATGACATTTT	NA	False	NA	NA	False	NA	NA	NA	114911551	114866840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.16	chr5	-	3681	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-23	1374	-23	794	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGGCTTCATGACATTT	NA	False	NA	NA	False	NA	NA	NA	114911579	114866841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.17	chr5	-	2863	19	NNC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.0675907454194	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTCCATAATGTCC	NA	False	NA	0	True	TATAAA	-16	NA	114911549	114867633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886240_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.18	chr5	-	2785	18	NNC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	76.7917238908692	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTCCATAATGTCC	NA	False	NA	0	True	TATAAA	-16	NA	114911566	114867633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886352_114887299_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.19	chr5	-	2968	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	61.2872533551857	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTCTCCATAATGTCC	NA	False	NA	0	True	TATAAA	-16	NA	114911553	114867633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.2	chr5	-	4950	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCATGTGCCCCCTCTAG	NA	False	NA	-5	True	AATAAA	-18	NA	114911566	114865469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.21	chr5	-	2773	18	NNC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.4490569431893	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911493	114867635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886352_114887299_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.23	chr5	-	3020	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911562	114867635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.26	chr5	-	2935	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911568	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.27	chr5	-	2936	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	65.354210572129	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911566	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.28	chr5	-	2731	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	65.7518139526377	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911558	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114911374
ES.26813.31	chr5	-	3728	4	ISM	ENSMUSG00000041890.18	ENSMUST00000146044.8	3707	6	7352	2165	-2350	-1	3prime_fragment	FALSE	canonical	3	223	junction_1	8.64098759787715	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	9657	False	NA	-3	True	TATAAA	-13	NA	114874577	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921
ES.26813.33	chr5	-	3937	19	Fusion	ENSMUSG00000041890.18_ENSMUSG00000092183.2	novel	2984	20	NA	NA	417	-1	multi-exon	FALSE	canonical	3	71	junction_11	54.7531215638675	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	9539	False	NA	-3	True	TATAAA	-13	NA	114912627	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.34	chr5	-	3082	21	NNC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	76.0939386547969	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTCTCCATAATG	NA	False	NA	-3	True	TATAAA	-13	NA	114911493	114867636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114893035_114893168_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.37	chr5	-	2930	19	NNC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	74.814503116329	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTGATGTCTCCATAA	NA	False	NA	-5	True	TATAAA	-11	NA	114911567	114867638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883627_114886240_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.38	chr5	-	5160	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	114	junction_5	48.3022888806639	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTGATGTCTCCATAA	NA	False	NA	-5	True	TATAAA	-11	NA	114911568	114867638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.4	chr5	-	5186	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCATGTGCCCCCTCTAG	NA	False	NA	-5	True	AATAAA	-18	NA	114911562	114865469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.41	chr5	-	2991	5	NNC	ENSMUSG00000041890.18	novel	3707	6	NA	NA	-1796	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.305470937532	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGCTGATGTCTCCATA	NA	False	NA	-6	True	TATAAA	-10	NA	114874023	114867639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114873261_114873440
ES.26813.42	chr5	-	2788	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-14	55	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGCAGCAGCAGCAGCA	NA	False	NA	NA	False	AAGAAA	-27	NA	114911570	114867875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.43	chr5	-	3136	5	NNC	ENSMUSG00000041890.18	novel	3707	6	NA	NA	-2194	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.305470937532	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAAACCC	9813	False	NA	NA	False	AGTAAA	-33	NA	114874421	114867892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114873261_114873440
ES.26813.45	chr5	-	2526	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-18	2430	-15	29	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTGGATTTAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-24	NA	114911571	114867901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.46	chr5	-	2612	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	-14	2434	-14	29	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTGGATTTAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-24	NA	114911570	114867901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.51	chr5	-	2361	17	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	26	combination_of_known_junctions	FALSE	canonical	2	2	junction_16	70.2054741010272	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTTGGATTTAAAAACAA	NA	False	NA	NA	False	AGTAAA	-21	NA	114911566	114867904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114911374
ES.26813.52	chr5	-	2308	17	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	36	23	combination_of_known_junctions	FALSE	canonical	2	2	junction_16	72.82170006255	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTTGGATTTAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	114911459	114867907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114911374
ES.26813.53	chr5	-	3562	18	Fusion	ENSMUSG00000041890.18_ENSMUSG00000092183.2	novel	5032	19	NA	NA	428	23	multi-exon	FALSE	canonical	3	47	junction_4	59.1705060729358	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTTGGATTTAAAAA	9550	False	NA	NA	False	AGTAAA	-18	NA	114912616	114867907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.54	chr5	-	2709	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-12	23	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	61.2872533551857	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTTGGATTTAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	114911568	114867907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.57	chr5	-	2613	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-6	23	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	70.897421987294	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGTTGGATTTAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	114911562	114867907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.58	chr5	-	2363	17	NIC	ENSMUSG00000041890.18	novel	4938	18	NA	NA	3	21	combination_of_known_splicesites	FALSE	canonical	3	9	junction_16	80.3877079767174	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAAAGTTGGATTTAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	114911550	114867909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114911374
ES.26813.6	chr5	-	5045	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTGCCCCCTCT	NA	False	NA	-7	True	AATAAA	-16	NA	114911570	114865471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.61	chr5	-	3063	11	NNC	ENSMUSG00000041890.18	novel	4938	18	NA	NA	-6459	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.5020230977288	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAAAGTTGGATTTAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	114892789	114867909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886240_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339
ES.26813.63	chr5	-	2551	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	36	19	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAGAAAGTTGGATTTA	NA	False	NA	NA	False	AGTAAA	-14	NA	114911459	114867911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.64	chr5	-	2458	18	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-4	16	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	71.0634007096144	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGATAAGAAAGTTGGAT	NA	False	NA	NA	False	AGTAAA	-11	NA	114911560	114867914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114911374
ES.26813.66	chr5	-	2413	18	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	-12	-78	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	59.1705060729358	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTCCAAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	114911568	114868008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.67	chr5	-	2408	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-10	-174	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAACCCTTGCCTTATT	NA	False	NA	NA	False	NA	NA	NA	114911566	114868104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.69	chr5	-	2264	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-13	2687	-10	-228	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGCTCAGTATTA	NA	False	NA	NA	False	AAAACA	-24	NA	114911566	114868158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.70	chr5	-	5445	14	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	2	-1337	intron_retention	FALSE	canonical	3	90	junction_1	48.8838739882047	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	114911551	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.71	chr5	-	3981	16	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-4	-1337	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	50.9253920510737	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	114911532	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.72	chr5	-	5527	15	NNC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-3	-1337	intron_retention	FALSE	canonical	1	1	junction_8	91.6894714984958	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	114911498	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114893035_114893168_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.73	chr5	-	3832	15	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	23	7794	-5	-1337	5prime_fragment	FALSE	canonical	3	90	junction_2	50.7630047678546	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	114911533	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.74	chr5	-	4024	2	ISM	ENSMUSG00000041890.18	ENSMUST00000130925.2	753	6	7450	1337	543	-1337	internal_fragment	FALSE	canonical	3	142	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	5354	False	NA	NA	False	NA	NA	NA	114878880	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114875499_114877093
ES.26813.75	chr5	-	6621	15	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	-4	-1337	intron_retention	FALSE	canonical	3	114	junction_2	52.4137775936123	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACCTCATAAAGCCGCT	NA	False	NA	NA	False	NA	NA	NA	114911560	114873261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114875499_114877093_114877343_114881791_114881942_114883489_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.77	chr5	-	1928	9	ISM	ENSMUSG00000041890.18	ENSMUST00000153756.8	2091	12	3	3972	0	2961	5prime_fragment	FALSE	canonical	3	142	junction_1	40.4714405476257	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTGTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	114911553	114889351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.78	chr5	-	2068	10	NNC	ENSMUSG00000041890.18	novel	2091	12	NA	NA	-5	2961	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	101.923718753019	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTCTCTGTGTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	114911561	114889351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114890389_114891339_114891386_114893035_114893168_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.79	chr5	-	6454	2	ISM	ENSMUSG00000041890.18	ENSMUST00000155908.8	2338	18	14802	21422	2998	2960	internal_fragment	FALSE	canonical	3	71	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	114896754	114889352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114890392_114891339
ES.26813.8	chr5	-	4796	17	NIC	ENSMUSG00000041890.18	novel	4944	19	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	9	junction_16	75.6875774153196	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTCATGTGCCC	NA	False	NA	-12	True	AATAAA	-11	NA	114911553	114865476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114911374
ES.26813.80	chr5	-	8073	7	ISM	ENSMUSG00000041890.18	ENSMUST00000153756.8	2091	12	97	6932	36	1	5prime_fragment	FALSE	canonical	3	220	junction_2	22.4406624976477	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	114911459	114892311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26813.81	chr5	-	1568	8	NNC	ENSMUSG00000041890.18	novel	693	6	NA	NA	-11	3679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4043782884421	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCACGCCTGCTGCTATG	NA	False	NA	NA	False	NA	NA	NA	114911567	114898732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114899442_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ES.26814.1	chr5	+	191	1	Intergenic	novelGene_22347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCTTTTAA	6105	False	NA	NA	False	NA	NA	NA	114948324	114948515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114948300_114948500
ES.26815.1	chr5	-	1329	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	7	-3	7	3	multi-exon	FALSE	canonical	3	46	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTTCTGTGCCTC	726	False	NA	3	True	ATTAAA	-26	NA	114952030	114946253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114947393_114951840
ES.26815.2	chr5	-	4288	2	NNC	ENSMUSG00000072694.9	novel	1333	2	NA	NA	1090	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCTGTCTGCTGTTCTG	1840	False	NA	-3	True	ATTAAA	-20	NA	114950916	114946259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114948407_114948775
ES.26815.3	chr5	-	1492	2	NNC	ENSMUSG00000072694.9	novel	1333	2	NA	NA	-4501	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGATCCTGTCTGCTG	NA	False	NA	-8	True	ATTAAA	-15	NA	114956538	114946264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_114947393_114956174
ES.26815.4	chr5	-	605	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	-30	4	1	-4	multi-exon	FALSE	canonical	3	102	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCCTGTTTTGGCGTCC	720	False	NA	-7	True	NA	NA	NA	114952036	114950857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114951267_114951840
ES.26815.5	chr5	-	487	1	NIC	ENSMUSG00000072694.9	novel	1333	2	NA	NA	31	-635	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCCTGTTGTGTTGTT	781	False	NA	NA	False	NA	NA	NA	114951975	114951488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114951500_114952000
ES.26816.1	chr5	-	1547	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	-18	-582	-18	582	multi-exon	FALSE	canonical	3	282	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCCTGTTTTGGCGTC	9575	False	NA	-3	True	NA	NA	NA	114961547	114959413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114960787_114961373
ES.26816.2	chr5	-	2095	1	NIC	ENSMUSG00000072694.9	novel	444	2	NA	NA	-2	582	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCCTGTTTTGGCGTC	9614	False	NA	-3	True	NA	NA	NA	114961508	114959413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_114959400_114961500
ES.26816.3	chr5	-	969	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	-24	2	-24	-2	multi-exon	FALSE	canonical	3	282	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	9569	False	NA	0	True	NA	NA	NA	114961553	114959997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114960787_114961373
ES.26816.4	chr5	-	1548	1	Genic_Genomic	ENSMUSG00000072694.9	novel	NA	NA	NA	NA	-16	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	9577	False	NA	0	True	NA	NA	NA	114961545	114959997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_114960000_114961500
ES.26816.5	chr5	-	600	2	FSM	ENSMUSG00000072694.9	ENSMUST00000100850.6	420	2	-43	-137	-20	137	multi-exon	FALSE	canonical	3	282	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTTTCTGGGTTCAAA	9573	False	NA	-6	True	NA	NA	NA	114961549	114960362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_114960787_114961373
ES.26817.1	chr5	+	195	1	Intergenic	novelGene_22348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTGACATCACAAGATG	NA	False	NA	21	True	NA	NA	NA	114967467	114967662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114967500_114967700
ES.26818.1	chr5	+	172	1	Intergenic	novelGene_22349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTTTTATTTTTTT	4239	False	NA	NA	False	NA	NA	NA	114974116	114974288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_114974100_114974300
ES.26819.1	chr5	-	2426	1	Intergenic	novelGene_22350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	115020315	115017889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115017900_115020300
ES.2682.1	chr10	+	1928	1	Intergenic	novelGene_2044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCATCAAACTAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	42013818	42015746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42013800_42015700
ES.26820.1	chr5	-	138	1	Intergenic	novelGene_22351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115036852	115036714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115036700_115036900
ES.26821.1	chr5	+	149	1	Intergenic	novelGene_22352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAGGAAGAAG	2210	False	NA	NA	False	NA	NA	NA	115055674	115055823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115055700_115055800
ES.26822.1	chr5	-	188	1	Intergenic	novelGene_22353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	115059786	115059598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115059600_115059800
ES.26823.1	chr5	+	2250	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	-71	2	-47	1	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGTCCTCATTTGTC	7787	False	NA	4	True	NA	NA	NA	115061251	115075972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ES.26823.2	chr5	+	5202	5	NIC	ENSMUSG00000041827.16	novel	2181	6	NA	NA	-47	-3	intron_retention	FALSE	canonical	3	18	junction_2	3.69966214673719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGAGTGGTCCTCATT	7787	False	NA	0	True	NA	NA	NA	115061251	115075968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115074128_115074976
ES.26823.3	chr5	+	1898	6	NNC	ENSMUSG00000041827.16	novel	2181	6	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	7.96492310069595	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGAGTGGTCCTCATTT	7989	False	NA	1	True	NA	NA	NA	115061453	115075969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115075123
ES.26824.1	chr5	+	141	1	Intergenic	novelGene_22354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATATATATAT	NA	False	NA	NA	False	NA	NA	NA	115077723	115077864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115077700_115077900
ES.26825.1	chr5	+	1351	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	24	1232	-22	767	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTGGTCAGTGCTGA	NA	False	NA	28	True	AATAAA	-30	NA	115080240	115086610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ES.26825.2	chr5	+	1825	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	27	755	-19	-755	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGGCCGTAGGCTACA	NA	False	NA	NA	False	AATAAA	-16	NA	115080243	115087087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ES.26825.3	chr5	+	1400	6	NIC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	-9	750	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	103.424175123614	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGACCTACACTAGCTCT	NA	False	NA	11	True	AATAAA	-13	NA	115080253	115086593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115080415_115083844_115083967_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ES.26825.4	chr5	+	974	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	37	1596	-9	403	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTTTTGGACTGAAT	NA	False	NA	NA	False	AATAGA	-20	NA	115080253	115086246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ES.26825.5	chr5	+	2951	7	NNC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	-8	8923	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	126.945745191488	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGTTTAAATGAACT	NA	False	NA	NA	False	NA	NA	NA	115080254	115096765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115093937_115095133_115095476
ES.26825.6	chr5	+	3310	2	NNC	ENSMUSG00000029559.16	novel	368	3	NA	NA	-8	-639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTTTGGACTCGAGCC	NA	False	NA	NA	False	NA	NA	NA	115080254	115083637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115082457_115082529
ES.26825.7	chr5	+	2000	5	NNC	ENSMUSG00000029559.16	novel	2607	6	NA	NA	-4	752	intron_retention	FALSE	canonical	0	0	junction_4	116.598402647721	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTACACTAGCTCTGC	NA	False	NA	13	True	AATAAA	-15	NA	115080258	115086595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084678_115085221
ES.26825.8	chr5	+	2552	4	FSM	ENSMUSG00000029559.16	ENSMUST00000147743.8	884	4	3	-1671	3	767	multi-exon	FALSE	canonical	3	243	junction_3	17.4547032821147	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTGGTCAGTGCTGA	NA	False	NA	28	True	AATAAA	-30	NA	115080265	115086610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349
ES.26826.1	chr5	-	3118	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	182	-109	-41	109	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTGTCCTTGTTAC	NA	False	NA	NA	False	NA	NA	NA	115108944	115086929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ES.26826.2	chr5	-	2800	10	NNC	ENSMUSG00000029556.13	novel	3191	10	NA	NA	-2243	9	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_9	4.34897462017354	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGACTGTCCATCAGTG	7915	False	NA	10	True	AGTAAA	-24	NA	115111396	115087029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115111247
ES.26826.3	chr5	-	3407	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	-217	1	-190	-1	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAAGCTTCCTGACTG	9968	False	NA	0	True	AGTAAA	-14	NA	115109343	115087039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ES.26826.4	chr5	-	167	1	Intergenic	novelGene_22355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAATCTGAGGACAT	NA	False	NA	NA	False	NA	NA	NA	115092441	115092274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115092300_115092400
ES.26827.1	chr5	+	119	1	Intergenic	novelGene_22356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTAATTAATTTAA	NA	False	NA	NA	False	NA	NA	NA	115115215	115115334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115115200_115115300
ES.26828.1	chr5	+	635	3	NNC	ENSMUSG00000086054.3	novel	740	6	NA	NA	15147	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAATATTTTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	115123125	115136097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115123354_115123811_115123945_115135823
ES.26829.1	chr5	-	198	1	Intergenic	novelGene_22357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAGAAAAGAAA	10021	False	NA	NA	False	NA	NA	NA	115124916	115124718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115124700_115124900
ES.2683.1	chr10	+	3207	2	Antisense	novelGene_ENSMUSG00000048756.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTAGTCAAGAAGATGAT	2177	False	NA	NA	False	NA	NA	NA	42143121	42146373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_42143551_42143595
ES.26830.1	chr5	+	4912	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	-1692	-16	-1692	16	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTGGTGGTTGGTGCA	NA	False	NA	44	True	AATAAA	-32	NA	115147503	115236865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.10	chr5	+	3147	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.357729927249	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTTTGGTCCTGACTTC	1489	False	NA	25	True	AATAAA	-13	NA	115149201	115236846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220373_115221504_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.11	chr5	+	3373	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	312.171281656255	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1489	False	NA	28	True	AATAAA	-16	NA	115149201	115236849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212970_115220279_115220400_115220945_115221114_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.12	chr5	+	3306	8	ISM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	6	7721	-3	6184	5prime_fragment	FALSE	canonical	3	647	junction_3	29.0881840096557	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGCACATAGCTTGA	1489	False	NA	NA	False	TTTAAA	-25	NA	115149201	115229128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881
ES.26830.13	chr5	+	3119	10	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	219.440196864658	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1489	False	NA	27	True	AATAAA	-15	NA	115149201	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.14	chr5	+	4396	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	6	-1198	-3	1198	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGGTCATCCGGTTCC	1489	False	NA	NA	False	NA	NA	NA	115149201	115238047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.15	chr5	+	3201	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.834583655946	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1492	False	NA	27	True	AATAAA	-15	NA	115149204	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212970_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.16	chr5	+	3191	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	203.692513362666	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1492	False	NA	28	True	AATAAA	-16	NA	115149204	115236849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233306_115233904_115234015_115235184
ES.26830.17	chr5	+	3183	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	212.600188146671	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1493	False	NA	26	True	AATAAA	-14	NA	115149205	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226447_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.18	chr5	+	3274	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.545408893078	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1493	False	NA	27	True	AATAAA	-15	NA	115149205	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115181543_115181625_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.19	chr5	+	3356	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.545408893078	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1493	False	NA	27	True	AATAAA	-15	NA	115149205	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115186417_115186581_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.2	chr5	+	2237	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	-65	1032	-65	-498	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACACATAAGAATTTGT	1418	False	NA	NA	False	NA	NA	NA	115149130	115235817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.20	chr5	+	3440	9	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	1	6184	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	298.279964965802	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGCACATAGCTTGA	1493	False	NA	NA	False	TTTAAA	-25	NA	115149205	115229128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115158792_115158931_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881
ES.26830.21	chr5	+	2972	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	202.99432064685	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1493	False	NA	27	True	AATAAA	-15	NA	115149205	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184_115235610_115235830
ES.26830.22	chr5	+	3786	10	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	647	junction_3	26.5153112068303	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1494	False	NA	26	True	AATAAA	-14	NA	115149206	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115234015_115235184
ES.26830.23	chr5	+	3214	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	212.44208622587	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1494	False	NA	28	True	AATAAA	-16	NA	115149206	115236849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222890_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.24	chr5	+	2674	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	211.061033826711	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTTTGTATTTTTTT	1494	False	NA	15	True	AATACA	-13	NA	115149206	115236312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212981_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.25	chr5	+	3359	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	268.863202182082	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1495	False	NA	27	True	AATAAA	-15	NA	115149207	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115220945_115221114_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.26	chr5	+	2129	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	4	-535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.834583655946	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATTACATCCACAGACA	1496	False	NA	NA	False	ATTAAA	-22	NA	115149208	115235780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212970_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.27	chr5	+	3342	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	271.843537886978	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1504	False	NA	26	True	AATAAA	-14	NA	115149216	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115219402_115219564_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.28	chr5	+	1459	6	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	14	131751	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	276.815028493758	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAATAAATAAATAAAT	1506	False	NA	NA	False	NA	NA	NA	115149218	115368600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115222072_115368472
ES.26830.29	chr5	+	2441	9	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	19	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	233.775232595329	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATATTTTTTTGTAT	1511	False	NA	9	True	AATACA	-7	NA	115149223	115236306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.3	chr5	+	3382	12	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	271.163425457389	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1442	False	NA	27	True	AATAAA	-15	NA	115149154	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115158792_115158931_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.30	chr5	+	2864	9	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	227.560843512235	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1511	False	NA	26	True	AATAAA	-14	NA	115149223	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115235184
ES.26830.31	chr5	+	4755	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.834583655946	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1552	False	NA	26	True	AATAAA	-14	NA	115149264	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115214585_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.32	chr5	+	2375	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-133	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	202.99432064685	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	1710	False	NA	27	True	AATAAA	-15	NA	115149422	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184_115235941_115236541
ES.26830.33	chr5	+	1150	9	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	33	4645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	227.560843512235	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTTTGTTTGCTTCA	1876	False	NA	NA	False	CATAAA	-15	NA	115149588	115227589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115227275
ES.26830.34	chr5	+	2200	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	84	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	212.44208622587	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGTATTTTTT	1927	False	NA	14	True	AATACA	-12	NA	115149639	115236311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221541_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.35	chr5	+	2649	9	ISM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	63675	1	445	-1	3prime_fragment	FALSE	canonical	3	647	junction_1	39.5013844694082	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	8878	False	NA	27	True	AATAAA	-15	NA	115212870	115236848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.36	chr5	+	241	1	Intergenic	novelGene_22361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTCTTTAATGTAG	NA	False	NA	NA	False	NA	NA	NA	115220967	115221208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115221000_115221200
ES.26830.37	chr5	+	1370	7	ISM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	72286	1070	9056	-536	3prime_fragment	FALSE	canonical	3	665	junction_3	40.7662714616984	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTATTACATCCACAGAC	NA	False	NA	NA	False	ATTAAA	-21	NA	115221481	115235779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.38	chr5	+	199	1	Intergenic	novelGene_22362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	635	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCCCAGAGACTGATTC	NA	False	NA	NA	False	NA	NA	NA	115222053	115222252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115222100_115222300
ES.26830.39	chr5	+	170	2	Antisense	novelGene_ENSMUSG00000072693.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	699	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	115222338	115258112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_115222491_115258094
ES.26830.4	chr5	+	2772	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	-33	465	-33	69	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGACAAAACAGAAAAAA	1450	False	NA	87	True	NA	NA	NA	115149162	115236384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26830.40	chr5	+	4457	5	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-7110	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	313.378764436903	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	NA	False	NA	26	True	AATAAA	-14	NA	115225705	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115226456_115226881_115228499_115232992_115233310_115233904_115234015_115235184
ES.26830.42	chr5	+	3397	3	NNC	ENSMUSG00000029550.12	novel	2330	2	NA	NA	-5434	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	350	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTTTGTATTTTTTT	NA	False	NA	15	True	AATACA	-13	NA	115227381	115236312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115228611_115232974_115234015_115235184
ES.26830.43	chr5	+	311	1	Intergenic	novelGene_22363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGTAACGAGTTCACAAT	2545	False	NA	NA	False	NA	NA	NA	115240590	115240901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115240600_115240900
ES.26830.44	chr5	+	177	1	Intergenic	novelGene_22364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	6291	False	NA	NA	False	NA	NA	NA	115244336	115244513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115244300_115244500
ES.26830.45	chr5	+	176	1	Intergenic	novelGene_22365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAACACACACACA	NA	False	NA	NA	False	NA	NA	NA	115255002	115255178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115255000_115255200
ES.26830.46	chr5	+	206	1	Intergenic	novelGene_22366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGGCTCAGTATCT	NA	False	NA	NA	False	AAAACA	-5	NA	115257933	115258139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115257900_115258100
ES.26830.47	chr5	+	2277	1	Intergenic	novelGene_22370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTGCAAGGGTTTGAA	4784	False	NA	NA	False	AATAAA	-17	NA	115332512	115334789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115332500_115334800
ES.26830.48	chr5	+	809	2	Intergenic	novelGene_22373	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCACTCCATTCATAAAA	651	False	NA	5	True	AATAAA	-16	NA	115341970	115343313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115342214_115342747
ES.26830.49	chr5	+	1887	2	Intergenic	novelGene_22374	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGAGCATGCCATCTG	664	False	NA	2	True	NA	NA	NA	115341983	115344404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115342214_115342747
ES.26830.5	chr5	+	3174	12	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	202.99432064685	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1466	False	NA	26	True	AATAAA	-14	NA	115149178	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184_115235839_115235883
ES.26830.50	chr5	+	1777	3	Intergenic	novelGene_22375	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	11	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAGCATGCCATCTGT	691	False	NA	3	True	NA	NA	NA	115342010	115344405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115342190_115342747_115344091_115344150
ES.26830.51	chr5	+	719	2	Intergenic	novelGene_22376	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGAGTCTATTTCCAA	733	False	NA	21	True	AATAAA	-32	NA	115342052	115343329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115342190_115342747
ES.26830.53	chr5	+	174	1	Intergenic	novelGene_22377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGCACAGTCA	2142	False	NA	NA	False	NA	NA	NA	115361228	115361402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115361200_115361400
ES.26830.6	chr5	+	2345	4	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	351.733800858926	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGGTCCTGACTTCA	1470	False	NA	26	True	AATAAA	-14	NA	115149182	115236847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115233229_115233310_115233904_115234015_115235184
ES.26830.7	chr5	+	4372	10	ISM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	2	0	2	0	intron_retention	FALSE	canonical	3	647	junction_3	41.5097787080955	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1485	False	NA	28	True	AATAAA	-16	NA	115149197	115236849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904
ES.26830.8	chr5	+	2672	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.834583655946	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGTATTTTTTTTG	1487	False	NA	17	True	AATACA	-15	NA	115149199	115236314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115149675_115199620_115199699_115212873_115212970_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ES.26831.1	chr5	-	2836	3	Intergenic	novelGene_22358	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGCTTAGATTTTTTT	9338	False	NA	NA	False	NA	NA	NA	115149039	115140252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115141096_115142694_115143106_115147457
ES.26832.1	chr5	-	754	2	Antisense	novelGene_ENSMUSG00000029550.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	115158891	115157591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115157969_115158514
ES.26833.1	chr5	-	2087	1	Intergenic	novelGene_22359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	115164159	115162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115162100_115164200
ES.26834.1	chr5	-	2294	1	FSM	ENSMUSG00000086167.4	ENSMUST00000148801.2	372	1	-1892	-30	-1892	30	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATGCCCACTGAACAC	514	False	NA	NA	False	NA	NA	NA	115193791	115191497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115191500_115193800
ES.26835.1	chr5	-	172	1	Intergenic	novelGene_22360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACCAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	115196248	115196076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115196100_115196200
ES.26836.1	chr5	-	169	1	Antisense	novelGene_ENSMUSG00000029550.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	115233024	115232855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115232900_115233000
ES.26837.1	chr5	-	375	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	-39	-42	-39	5	mono-exon	FALSE	NA	NA	NA	NA	NA	952	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTAATCCTCTG	NA	False	NA	-10	True	AATAAA	-18	NA	115241619	115241244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115241200_115241600
ES.26838.1	chr5	-	1910	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	-39	-1	-39	1	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTGTGTCTGTCTTC	9735	False	NA	-3	True	AATAAA	-19	NA	115257444	115248356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ES.26838.10	chr5	-	1962	11	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	171.377244697188	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9736	False	NA	-5	True	AATAAA	-17	NA	115257443	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115256835_115256891_115257283
ES.26838.11	chr5	-	2525	8	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_7	198.975539466846	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGCCTGTGTCTGTC	9831	False	NA	-6	True	AATAAA	-16	NA	115257348	115248359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115249066_115249152_115249210_115249377_115250087_115250298_115250936_115251122_115251273_115255623_115255788_115256835_115256873_115257283
ES.26838.12	chr5	-	1914	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGCCTGTGTCTGT	9809	False	NA	-7	True	AATAAA	-15	NA	115257370	115248360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ES.26838.13	chr5	-	1073	4	NIC	ENSMUSG00000029545.14	novel	2023	9	NA	NA	7285	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	205.223455449582	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGCCTGTGTCTGT	NA	False	NA	-7	True	AATAAA	-15	NA	115250049	115248360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249377_115249474_115249695_115249834_115249915
ES.26838.14	chr5	-	2677	6	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	428	junction_3	14.4360659460949	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGCCTGTGTCTGT	9828	False	NA	-7	True	AATAAA	-15	NA	115257351	115248360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115250087_115250298_115251273_115255623_115255788_115257283
ES.26838.2	chr5	-	2270	8	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	425	junction_3	15.5445377242691	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9828	False	NA	-5	True	AATAAA	-17	NA	115257351	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250936_115251122_115251273_115255623_115255788_115257283
ES.26838.3	chr5	-	2220	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	425	junction_3	14.5682660258522	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9796	False	NA	-5	True	AATAAA	-17	NA	115257383	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250936_115251122_115251273_115255623_115255788_115257283
ES.26838.5	chr5	-	2270	10	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	16	junction_8	178.380229209516	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9801	False	NA	-5	True	AATAAA	-17	NA	115257378	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250936_115251122_115251273_115255623_115255788_115256835_115256891_115257283
ES.26838.6	chr5	-	2285	7	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	1569	-1	intron_retention	FALSE	canonical	3	425	junction_3	14.5487685618635	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	115255765	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115251273_115255623
ES.26838.7	chr5	-	1753	8	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	25	junction_7	145.167742523564	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9808	False	NA	-5	True	AATAAA	-17	NA	115257371	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115257283
ES.26838.8	chr5	-	1654	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	137.50522717337	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9825	False	NA	-5	True	AATAAA	-17	NA	115257354	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115257283
ES.26838.9	chr5	-	1990	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	11	-1	intron_retention	FALSE	canonical	3	425	junction_2	14.6030818665102	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	9821	False	NA	-5	True	AATAAA	-17	NA	115257358	115248358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115249066_115249152_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ES.26839.1	chr5	-	3651	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	7	1	7	-1	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTCCTGATTGGGCC	NA	False	NA	9	True	AATAAA	-26	NA	115273027	115260609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
ES.26839.10	chr5	-	181	1	Intergenic	novelGene_22367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAGAAAGAA	5418	False	NA	NA	False	NA	NA	NA	115267475	115267294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115267300_115267500
ES.26839.2	chr5	-	5111	4	NIC	ENSMUSG00000046562.6	novel	3659	5	NA	NA	-2	-10	intron_retention	FALSE	canonical	3	286	junction_3	6.37704215656966	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTCTGACTTGCCTCCT	NA	False	NA	0	True	AATAAA	-17	NA	115272986	115260618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115265243_115265360_115265473_115268525_115268640_115272725
ES.26839.5	chr5	-	3543	5	NNC	ENSMUSG00000046562.6	novel	3659	5	NA	NA	11	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.858075615113	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCACTCTGACTTGCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115272973	115260621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115263560_115265111_115265243_115265360_115265473_115268525_115268640_115272725
ES.26839.6	chr5	-	3483	4	NIC	ENSMUSG00000046562.6	novel	3659	5	NA	NA	-2	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	137.334142392439	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCACTCTGACTTGCC	NA	False	NA	-4	True	AATAAA	-13	NA	115272986	115260622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115263560_115265069_115265243_115265360_115265473_115272725
ES.26839.7	chr5	-	5217	3	NIC	ENSMUSG00000046562.6	novel	3659	5	NA	NA	4	-16	intron_retention	FALSE	canonical	3	286	junction_2	7	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTCACTCTGACTTG	NA	False	NA	-6	True	AATAAA	-11	NA	115272980	115260624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115265473_115268525_115268640_115272725
ES.26839.9	chr5	-	1047	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	42	2570	-8	-158	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTCTTAGCTGTGCACTG	NA	False	NA	-6	True	GATAAA	-14	NA	115272992	115263178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
ES.2684.1	chr10	+	3829	4	Antisense	novelGene_ENSMUSG00000048756.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTTGCTATGTGTTCA	9203	False	NA	NA	False	AATAAA	-35	NA	42150147	42164258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_42150526_42157913_42160530_42160724_42161085_42163783
ES.2684.2	chr10	+	1854	2	Intergenic	novelGene_2046	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTGATGTTAATGTCA	NA	False	NA	NA	False	AAAAAG	-19	NA	42161053	42163014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42161085_42161191
ES.26840.1	chr5	-	179	1	Intergenic	novelGene_22368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	115276976	115276797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115276800_115277000
ES.26841.1	chr5	-	2473	2	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	6383	1669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	933	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	115282722	115279370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115279419_115280297
ES.26841.10	chr5	-	5852	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4732	False	NA	-3	True	AATAAA	-16	NA	115296230	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861_115296070_115296164
ES.26841.11	chr5	-	5971	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	510.710779208742	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4715	False	NA	-3	True	AATAAA	-16	NA	115296247	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288867_115289054_115295861
ES.26841.12	chr5	-	5931	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	505.845084981558	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4737	False	NA	-4	True	AATAAA	-15	NA	115296225	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295871
ES.26841.14	chr5	-	8105	4	FSM	ENSMUSG00000048578.12	ENSMUST00000124678.2	505	4	-2476	-5124	-2476	-1	multi-exon	FALSE	canonical	3	1139	junction_2	22.4845626053867	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	9381	False	NA	-4	True	AATAAA	-15	NA	115291581	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
ES.26841.15	chr5	-	6620	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	484.643876985978	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4701	False	NA	-4	True	AATAAA	-15	NA	115296261	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295218
ES.26841.16	chr5	-	6667	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-75	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	505.412393496638	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4649	False	NA	-4	True	AATAAA	-15	NA	115296313	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295223
ES.26841.17	chr5	-	3952	2	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	3688	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	NA	False	NA	-4	True	AATAAA	-15	NA	115285417	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115282095_115282519
ES.26841.18	chr5	-	3519	4	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	570.059646002065	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4752	False	NA	-4	True	AATAAA	-15	NA	115296210	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115283944_115288355_115288444_115288874_115289054_115295861
ES.26841.19	chr5	-	6464	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	504.547012180233	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCGTGTTGAGAGTGAAT	4727	False	NA	-4	True	AATAAA	-15	NA	115296235	115281040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295348
ES.26841.21	chr5	-	6677	4	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	1	junction_3	556.586620991438	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4719	False	NA	-5	True	AATAAA	-14	NA	115296243	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288444_115288874_115289054_115295223
ES.26841.22	chr5	-	4664	4	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	570.059646002065	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4719	False	NA	-5	True	AATAAA	-14	NA	115296243	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115285050_115288348_115288444_115288874_115289054_115295861
ES.26841.23	chr5	-	3433	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4757	False	NA	-5	True	AATAAA	-14	NA	115296205	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115283670_115286156_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.24	chr5	-	5751	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	19	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4743	False	NA	-5	True	AATAAA	-14	NA	115296219	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115283680_115283862_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.25	chr5	-	5584	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4732	False	NA	-5	True	AATAAA	-14	NA	115296230	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115281875_115282235_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.26	chr5	-	5927	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	515.508668695299	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTGTTGAGAGTGAA	4728	False	NA	-5	True	AATAAA	-14	NA	115296234	115281041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288164_115288266_115288444_115288874_115289054_115295861
ES.26841.28	chr5	-	7253	2	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCGTGTTGAGAGTGA	4746	False	NA	-6	True	AATAAA	-13	NA	115296216	115281042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115285836_115293756
ES.26841.29	chr5	-	6398	4	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	1139	junction_2	35.1978534699048	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCGTGTTGAGAGTGA	4709	False	NA	-6	True	AATAAA	-13	NA	115296253	115281042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115286204_115288127_115288186_115288266_115289054_115295861
ES.26841.31	chr5	-	5932	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	514.312830386332	1445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCGTGTTGAGAGTGA	4737	False	NA	-6	True	AATAAA	-13	NA	115296225	115281042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288134_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.33	chr5	-	6028	4	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	5	-3	intron_retention	FALSE	canonical	3	1169	junction_1	22.4845626053867	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCGTGTTGAGAGTGA	4729	False	NA	-6	True	AATAAA	-13	NA	115296233	115281042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115286204_115288127_115288444_115288874_115289054_115295861
ES.26841.34	chr5	-	5535	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCCGTGTTGAGAGT	4731	False	NA	-8	True	AATAAA	-11	NA	115296231	115281044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115283985_115284392_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.35	chr5	-	5924	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCCGTGTTGAGAGT	4708	False	NA	-8	True	AATAAA	-11	NA	115296254	115281044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115282141_115282182_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.36	chr5	-	4967	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	11	977	11	-977	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTTCTCGGGCTGC	4735	False	NA	NA	False	NA	NA	NA	115296227	115282016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.37	chr5	-	4509	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-18	1464	-18	-1464	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCATTGTGGCCACC	4706	False	NA	NA	False	AATACA	-25	NA	115296256	115282503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.38	chr5	-	4110	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-2	1847	-2	-1847	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTTCTTGTCTCATT	4722	False	NA	NA	False	NA	NA	NA	115296240	115282886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.39	chr5	-	4488	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	5	-2100	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	505.412393496638	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGGAGGGCTTGCTC	4729	False	NA	NA	False	ATTAAA	-23	NA	115296233	115283139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295223
ES.26841.4	chr5	-	5266	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	473.429783600483	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4728	False	NA	-3	True	AATAAA	-16	NA	115296234	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115284628_115285312_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.40	chr5	-	3927	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-75	2103	-75	-2103	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCTGAGGAGGGCTTG	4649	False	NA	NA	False	ATTAAA	-20	NA	115296313	115283142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.41	chr5	-	4324	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	34	-2110	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	504.547012180233	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGCAGTCCTGAGGA	4758	False	NA	NA	False	ATTAAA	-13	NA	115296204	115283149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295348
ES.26841.42	chr5	-	3529	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-52	2478	-52	-2478	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCACTGTTTGTTCC	4672	False	NA	NA	False	NA	NA	NA	115296290	115283517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.44	chr5	-	3271	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-7	2691	-7	2434	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGAAGGGAAGGAGTGT	4717	False	NA	NA	False	AATAAA	-18	NA	115296245	115283730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.45	chr5	-	3057	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-74	2972	-74	2153	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCCTCCGTGTCACCT	4650	False	NA	NA	False	ATTAAA	-16	NA	115296312	115284011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.46	chr5	-	2905	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-304	3354	-304	1771	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAATGTGTTTGAAT	4420	False	NA	53	True	NA	NA	NA	115296542	115284393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.47	chr5	-	2387	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	5	3563	5	1562	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTCTGTCTCAGATTC	4729	False	NA	NA	False	NA	NA	NA	115296233	115284602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.48	chr5	-	2253	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-15	3717	-15	1408	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCTGTGTTTCTCAT	4709	False	NA	NA	False	NA	NA	NA	115296253	115284756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.49	chr5	-	2016	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	38	3901	38	1224	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTTGGATTAGAAA	4762	False	NA	NA	False	NA	NA	NA	115296200	115284940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.50	chr5	-	2407	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-603	4151	-603	974	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGTTCATTTGAAATT	4121	False	NA	0	True	NA	NA	NA	115296841	115285190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.51	chr5	-	1735	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	5	935	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	505.845084981558	1230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTTGAGGACTTGATT	4729	False	NA	-39	True	NA	NA	NA	115296233	115285229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295886
ES.26841.53	chr5	-	8568	4	FSM	ENSMUSG00000048578.12	ENSMUST00000124678.2	505	4	-7130	-933	3	933	multi-exon	FALSE	canonical	3	1139	junction_2	22.4845626053867	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTGTTGAGGACTTGA	4727	False	NA	-41	True	NA	NA	NA	115296235	115285231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874
ES.26841.54	chr5	-	1668	6	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	34	932	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	473.429783600483	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTGTTGAGGACTTG	4758	False	NA	-42	True	NA	NA	NA	115296204	115285232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861_115295969_115296028
ES.26841.55	chr5	-	1573	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	9	4373	9	752	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGCGCTTCCTTCCT	4733	False	NA	NA	False	NA	NA	NA	115296229	115285412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.56	chr5	-	1478	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-8	4485	-8	640	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGGTGTGTTCTGAGT	4716	False	NA	NA	False	NA	NA	NA	115296246	115285524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.57	chr5	-	989	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	-25	4991	-25	134	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGTGGCCTTCGGAGT	4699	False	NA	-3	True	NA	NA	NA	115296263	115286030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.59	chr5	-	181	1	Intergenic	novelGene_22369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115287380	115287199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115287200_115287400
ES.26841.6	chr5	-	3448	3	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	3349	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	NA	False	NA	-3	True	AATAAA	-16	NA	115285756	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115282328_115282386_115283149_115284358
ES.26841.60	chr5	-	886	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	32	-1035	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	511.287101343267	1162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4756	False	NA	NA	False	NA	NA	NA	115296206	115287199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115287327_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ES.26841.61	chr5	-	1727	1	Genic_Genomic	ENSMUSG00000048578.12	novel	NA	NA	NA	NA	-15	-8362	mono-exon	FALSE	NA	NA	NA	NA	NA	1002	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTCTTTTAA	4709	False	NA	NA	False	NA	NA	NA	115296253	115294526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_115294500_115296300
ES.26841.62	chr5	-	1214	1	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	4	-8856	mono-exon	FALSE	NA	NA	NA	NA	NA	1002	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGTAGACAAACTTTTT	4728	False	NA	NA	False	AATACA	-21	NA	115296234	115295020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115295000_115296200
ES.26841.8	chr5	-	6482	3	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1169	junction_1	27.5	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4709	False	NA	-3	True	AATAAA	-16	NA	115296253	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115286204_115288127_115289054_115295861
ES.26841.9	chr5	-	8406	2	NIC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1224	junction_1	0	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4709	False	NA	-3	True	AATAAA	-16	NA	115296253	115281039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115289054_115295861
ES.26842.1	chr5	-	7755	6	ISM	ENSMUSG00000029544.17	ENSMUST00000145197.9	840	7	-1593	-282	-1341	0	intron_retention	FALSE	canonical	3	15	junction_5	80.8272231367625	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	8815	False	NA	-1	True	AATAAA	-20	NA	115325708	115306747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318846
ES.26842.10	chr5	-	1081	6	NNC	ENSMUSG00000029544.17	novel	1621	6	NA	NA	-2676	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	79.358931444419	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGAGGGTGGTCCTTGC	7480	False	NA	-4	True	AATAAA	-17	NA	115327043	115306750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115326852
ES.26842.13	chr5	-	1075	6	NNC	ENSMUSG00000029544.17	novel	1071	7	NA	NA	-680	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	78.9926578866669	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAACCGAGAA	8083	False	NA	-26	True	NA	NA	NA	115333120	115306772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115332913
ES.26842.14	chr5	-	1252	7	NNC	ENSMUSG00000029544.17	novel	1071	7	NA	NA	-677	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	88.7926736216952	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAACCGAGAA	8086	False	NA	-26	True	NA	NA	NA	115333117	115306772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115332913
ES.26842.17	chr5	-	3208	5	NNC	ENSMUSG00000029544.17	novel	1071	7	NA	NA	2695	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.5660395791398	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAACCGAGAA	NA	False	NA	-26	True	NA	NA	NA	115316623	115306772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313628_115314298
ES.26842.3	chr5	-	2720	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	-1351	1	-1351	-1	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8805	False	NA	-2	True	AATAAA	-19	NA	115325718	115306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
ES.26842.4	chr5	-	1940	8	NNC	ENSMUSG00000029544.17	novel	840	7	NA	NA	-1364	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.4469614444566	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8792	False	NA	-2	True	AATAAA	-19	NA	115325731	115306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318846_115319031_115324070_115324167_115324963
ES.26842.5	chr5	-	4987	6	NNC	ENSMUSG00000029544.17	novel	1621	6	NA	NA	701	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	86.3749963820549	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	5498	False	NA	-2	True	AATAAA	-19	NA	115321502	115306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115316244_115319321
ES.26842.6	chr5	-	1616	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	4	1	4	-1	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8767	False	NA	-2	True	AATAAA	-19	NA	115332436	115306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
ES.26842.8	chr5	-	1593	6	NNC	ENSMUSG00000029544.17	novel	1621	6	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.6917327916378	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGGGTGGTCCTTGCTT	8780	False	NA	-2	True	AATAAA	-19	NA	115332423	115306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115307208_115310817_115310966_115311183_115311284_115313437_115313582_115314298_115314330_115331712
ES.26842.9	chr5	-	4513	5	ISM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	1530	-23	1367	-2	3prime_fragment	FALSE	canonical	3	159	junction_4	35.5765020765111	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGGTGGTCCTTGCT	9049	False	NA	-3	True	AATAAA	-18	NA	115317951	115306749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298
ES.26843.1	chr5	-	175	1	Intergenic	novelGene_22371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAACAAACAAAAAATGCA	4942	False	NA	NA	False	NA	NA	NA	115336261	115336086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115336100_115336300
ES.26844.1	chr5	-	178	1	Intergenic	novelGene_22372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTTGTTGTTTTGG	8252	False	NA	-1	True	NA	NA	NA	115340704	115340526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115340500_115340700
ES.26845.1	chr5	-	178	1	Intergenic	novelGene_22378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	115367533	115367355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115367400_115367500
ES.26846.10	chr5	+	1044	2	FSM	ENSMUSG00000060152.15	ENSMUST00000154800.2	380	2	62	-726	-6	2	multi-exon	FALSE	canonical	3	770	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCACTTGCCTTGA	NA	False	NA	13	True	AATAAA	-15	NA	115376099	115379027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115376337_115378220
ES.26846.11	chr5	+	725	5	NNC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	347.8975244235	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCACTTGCCTTGA	NA	False	NA	13	True	AATAAA	-15	NA	115376100	115379027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115376129_115376193_115376337_115378220_115378371_115378541_115378616_115378697
ES.26846.12	chr5	+	3812	4	NIC	ENSMUSG00000060152.15	novel	1587	6	NA	NA	-5	2379	intron_retention	FALSE	canonical	0	0	junction_3	364.403927287045	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGCATATTTACTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	115376100	115385789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115382447
ES.26846.13	chr5	+	2860	2	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2212	19	1	6	intron_retention	FALSE	canonical	3	535	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376106	115379031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115376129_115376193
ES.26846.14	chr5	+	802	4	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2219	25	8	0	intron_retention	FALSE	canonical	3	535	junction_1	112.221012094686	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTGCACTTGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	115376113	115379025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531
ES.26846.2	chr5	+	820	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2127	17	-16	8	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTGCCTTGAATGTGC	NA	False	NA	19	True	AATAAA	-21	NA	115376021	115379033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ES.26846.3	chr5	+	827	4	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	-17	2	intron_retention	FALSE	canonical	3	770	junction_1	71.2242156073964	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCACTTGCCTTGA	NA	False	NA	13	True	AATAAA	-15	NA	115376073	115379027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115376337_115378220_115378371_115378531_115378616_115378697
ES.26846.4	chr5	+	2795	2	NIC	ENSMUSG00000060152.15	novel	575	4	NA	NA	-15	6	intron_retention	FALSE	canonical	3	776	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376075	115379031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115378371_115378531
ES.26846.5	chr5	+	788	5	NIC	ENSMUSG00000060152.15	novel	1587	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_3	341.157588219872	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTGCACTTGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	115376090	115379025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115376129_115376193_115376337_115378220_115378416_115378531_115378616_115378697
ES.26846.6	chr5	+	602	4	FSM	ENSMUSG00000060152.15	ENSMUST00000128830.5	575	4	-3	-24	0	2	multi-exon	FALSE	canonical	3	53	junction_1	380.536755415587	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCACTTGCCTTGA	NA	False	NA	13	True	AATAAA	-15	NA	115376090	115379027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115376129_115378220_115378371_115378531_115378616_115378697
ES.26846.7	chr5	+	664	5	NNC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	350.282296869254	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGCACTTGCCTTGA	NA	False	NA	13	True	AATAAA	-15	NA	115376091	115379027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115376129_115376193_115376337_115378220_115378291_115378531_115378616_115378697
ES.26846.8	chr5	+	841	2	FSM	ENSMUSG00000060152.15	ENSMUST00000142233.2	529	2	-13	-299	-1	0	multi-exon	FALSE	canonical	3	53	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTGCACTTGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	115376092	115379025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115376129_115378220
ES.26846.9	chr5	+	2937	1	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	1	6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTTGCCTTGAATGT	NA	False	NA	17	True	AATAAA	-19	NA	115376094	115379031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115376100_115379000
ES.26847.1	chr5	+	168	1	Intergenic	novelGene_22379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAAGACCAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	115393118	115393286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115393100_115393300
ES.26848.1	chr5	+	4351	1	FSM	ENSMUSG00000083875.2	ENSMUST00000118764.2	302	1	-2862	-1187	-2862	1187	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACCATTATTAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	115398289	115402640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115398300_115402600
ES.26848.2	chr5	+	5266	1	FSM	ENSMUSG00000083875.2	ENSMUST00000118764.2	302	1	-2861	-2103	-2861	2103	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115398290	115403556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115398300_115403600
ES.26849.1	chr5	-	3169	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	-38	-19	-35	19	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTTGTAGCCCTTAA	NA	False	NA	-1	True	AATAAA	-39	NA	115410992	115379809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.10	chr5	-	3141	18	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	510.048786593873	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410953	115379828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115387715_115387746_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.12	chr5	-	3098	17	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	394.129058613736	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410947	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386769_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.13	chr5	-	8540	13	NIC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	78	junction_6	416.087530855388	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115385041_115385227_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115395233_115398177_115398375_115410315
ES.26849.16	chr5	-	3073	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	291	junction_2	325.617274380522	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410953	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380574_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.17	chr5	-	6807	14	NIC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	224	junction_1	367.539958782409	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115395233_115398177_115398375_115410315
ES.26849.20	chr5	-	3185	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1263	junction_13	140.36735929537	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410954	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.21	chr5	-	4912	15	NIC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	78	junction_8	391.963268791392	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410951	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.22	chr5	-	2865	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	393.757618973906	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410951	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398209_115410392
ES.26849.23	chr5	-	3160	18	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	504.425707233134	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115397552_115397606_115398177_115398375_115410315
ES.26849.24	chr5	-	3100	17	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	389.485111838373	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380114_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.25	chr5	-	2530	16	NIC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	-210	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	528.46942095914	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410570	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115398177_115398375_115410315
ES.26849.27	chr5	-	3513	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	132	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	391.715652410968	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410819	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115394037_115395032_115395233_115398177_115398375_115410315
ES.26849.28	chr5	-	2514	17	NNC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	513.729314516653	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398224_115410760
ES.26849.29	chr5	-	3101	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	390.221391488217	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410950	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384944_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.30	chr5	-	3007	18	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	382.473220900343	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410951	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315_115410405_115410505
ES.26849.31	chr5	-	2047	14	ISM	ENSMUSG00000041740.17	ENSMUST00000139853.2	2408	16	15255	-8	846	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	418.296064568071	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115395105	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_115380121_115380451_115380611_115380692_115380751_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032
ES.26849.33	chr5	-	1755	14	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	860	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	426.907206912239	1450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115395091	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115379901_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032
ES.26849.34	chr5	-	5938	12	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_6	461.317677961727	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTCCCGACAAGCA	NA	False	NA	-21	True	AATAAA	-19	NA	115410955	115379829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115386775_115386973_115387230_115387451_115387582_115388028_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.35	chr5	-	3207	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	389.082529604903	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTCCCGACAAGC	NA	False	NA	-22	True	AATAAA	-18	NA	115410954	115379830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384841_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.36	chr5	-	4453	8	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	34	-2	intron_retention	FALSE	canonical	3	1435	junction_7	97.5652581190494	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTCCCGACAAGC	NA	False	NA	-22	True	AATAAA	-18	NA	115387512	115379830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115384064_115384938_115385041_115385227_115386775_115386973_115387230_115387455
ES.26849.38	chr5	-	2447	16	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	406.413724615146	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCCTTCCCGACAAG	NA	False	NA	-23	True	AATAAA	-17	NA	115410949	115379831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395218_115410760
ES.26849.43	chr5	-	3015	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	391.715652410968	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCCTTCCCGACAAG	NA	False	NA	-23	True	AATAAA	-17	NA	115410951	115379831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395123_115395233_115398177_115398375_115410315
ES.26849.45	chr5	-	3431	18	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	500.171977344208	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCCTTCCCGACAAG	NA	False	NA	-23	True	AATAAA	-17	NA	115410951	115379831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383058_115383384_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.46	chr5	-	5346	14	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	4	2	intron_retention	FALSE	canonical	3	1263	junction_11	140.232773520425	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCCTTCCCGACAAG	NA	False	NA	-23	True	AATAAA	-17	NA	115410947	115379831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.50	chr5	-	2927	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	393.951094482234	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410951	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395140_115398261_115398375_115410315
ES.26849.51	chr5	-	4306	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	384.557030068363	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410950	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115383384_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.52	chr5	-	3012	18	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	471.301518252664	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410947	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315_115410405_115410489
ES.26849.55	chr5	-	3096	17	NNC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	394.244287965913	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410950	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387223_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.56	chr5	-	3249	18	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	625.025225788506	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410949	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384841_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115397552_115397606_115398177_115398375_115410315
ES.26849.57	chr5	-	4815	13	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_12	449.275983914367	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410950	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395218_115410760
ES.26849.58	chr5	-	3981	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	1263	junction_13	136.219528702752	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410953	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.59	chr5	-	4916	14	NIC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	224	junction_1	374.939048300958	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCCGCCTTCCCGACA	NA	False	NA	-25	True	AATAAA	-15	NA	115410950	115379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115386775_115386973_115387230_115387455_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.6	chr5	-	4407	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1263	junction_13	134.410548527843	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.60	chr5	-	3666	12	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	849	-2	intron_retention	FALSE	canonical	0	0	junction_7	618.437527327225	1450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115395102	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115386775_115386973_115387230_115387449_115387582_115388028_115388190_115389159_115389521_115393408_115393500_115395032
ES.26849.61	chr5	-	3110	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	394.244287965913	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410953	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387449_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.63	chr5	-	3548	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1263	junction_13	139.414489921242	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.64	chr5	-	3374	15	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1263	junction_12	144.525913925214	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.65	chr5	-	3234	18	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	568.372654205358	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410951	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115403208_115403344_115410315
ES.26849.66	chr5	-	5101	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	394.222811364335	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115390006_115391893_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.67	chr5	-	2945	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	392.772402289163	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.68	chr5	-	5205	13	NNC	ENSMUSG00000041740.17	novel	3106	17	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	582.987111540403	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380107_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115386775_115386973_115387230_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.69	chr5	-	4708	15	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1360	junction_14	125.615159783153	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115395233_115398177_115398375_115410315
ES.26849.71	chr5	-	4049	15	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1263	junction_12	140.977636090094	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410949	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.73	chr5	-	3190	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	394.129058613736	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410950	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386864_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.74	chr5	-	8868	9	NIC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1263	junction_6	144.788585099102	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	False	NA	-27	True	AATAAA	-13	NA	115410951	115379835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115386775_115386973_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.75	chr5	-	2982	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	394.129058613736	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGAGCCGCCTTCCCG	NA	False	NA	-28	True	AATAAA	-12	NA	115410950	115379836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115387091_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.76	chr5	-	3036	10	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	-1638	0	intron_retention	FALSE	canonical	3	1373	junction_6	127.317431622939	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	False	NA	-29	True	AATAAA	-11	NA	115389184	115379837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115388190_115389124
ES.26849.79	chr5	-	3092	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	390.109314607778	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	False	NA	-29	True	AATAAA	-11	NA	115410950	115379837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385034_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.8	chr5	-	3797	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	390.221391488217	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410950	115379828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384249_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.81	chr5	-	3094	17	NNC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	394.187435587437	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	False	NA	-29	True	AATAAA	-11	NA	115410951	115379837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388034_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ES.26849.83	chr5	-	3321	16	NNC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_14	406.870309667453	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGAGCCGCCTTCCC	NA	False	NA	-29	True	AATAAA	-11	NA	115410950	115379837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395229_115398177_115398375_115410315
ES.26849.84	chr5	-	182	1	Intergenic	novelGene_22380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	115406194	115406012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115406000_115406200
ES.26849.85	chr5	-	2275	1	FSM	ENSMUSG00000041740.17	ENSMUST00000200923.2	2276	1	7	-6	4	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	ATTAAA	-4	NA	115410947	115408672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115408700_115410900
ES.26849.9	chr5	-	10693	12	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	1360	junction_11	110.676283229161	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410953	115379828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115380121_115380451_115380751_115382079_115384064_115384938_115385041_115385227_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115398375_115410315
ES.2685.1	chr10	-	6883	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	-32	-3	-29	3	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGTCTGTCATCATT	NA	False	NA	1	True	AATAAA	-25	NA	42152780	42057833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.10	chr10	-	6778	4	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	-850	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	61.3315217123752	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTCATGCCCAGGAGTC	NA	False	NA	-9	True	AATAAA	-15	NA	42153601	42057843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150811_42151542_42153437
ES.2685.12	chr10	-	6146	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	55	647	-1	-647	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATACTTGTGCGACTGTT	NA	False	NA	NA	False	AATGAA	-28	NA	42152693	42058483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.13	chr10	-	5711	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	-3	1140	0	-1140	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGCTTTAAGAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	42152751	42058976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.14	chr10	-	4247	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	58	2543	2	1402	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGAGTCGTGTGACCTG	NA	False	NA	NA	False	TTTAAA	-20	NA	42152690	42060379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.15	chr10	-	3645	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	4	3199	4	746	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGGTGCTGTATAGGTG	NA	False	NA	NA	False	NA	NA	NA	42152744	42061035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.17	chr10	-	3670	5	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	-1	691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.6295857775316	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGCTTCTGTGGAA	NA	False	NA	NA	False	AATACA	-36	NA	42152693	42061090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42121395_42121527_42150811_42151542_42152521
ES.2685.18	chr10	-	3727	4	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	-847	682	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	59.9184631163235	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTTTTCTGCT	NA	False	NA	NA	False	AATACA	-27	NA	42153598	42061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150811_42151542_42153229
ES.2685.19	chr10	-	3455	4	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	938	682	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	60.3894766402963	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACTTTTTCTGCT	NA	False	NA	NA	False	AATACA	-27	NA	42151754	42061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150811_42151542_42151657
ES.2685.20	chr10	-	2738	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2112	681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAACTTTTTCTGC	NA	False	NA	NA	False	AATACA	-26	NA	42150580	42061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150469
ES.2685.22	chr10	-	2664	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	55	4129	-1	-184	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCGTCTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	42152693	42061965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ES.2685.23	chr10	-	152	1	Intergenic	novelGene_2045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42099751	42099599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_42099600_42099800
ES.2685.24	chr10	-	3661	2	ISM	ENSMUSG00000048756.12	ENSMUST00000105501.2	1316	3	-1377	12	-1377	-12	intron_retention	FALSE	canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAGCCTATGTATCAG	NA	False	NA	NA	False	AATAAA	-15	NA	42154128	42123438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_42123783_42150811
ES.2685.25	chr10	-	399	2	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2	-28737	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTCGGCCCTCTCTCT	NA	False	NA	NA	False	AATACA	-21	NA	42152690	42152163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42152394_42152521
ES.2685.3	chr10	-	6010	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2104	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGGAGTCTGTCATC	NA	False	NA	-2	True	AATAAA	-22	NA	42150588	42057836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150469
ES.2685.4	chr10	-	5959	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2113	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	63	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	42150579	42057840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150507
ES.2685.5	chr10	-	4294	4	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2113	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.3397786612521	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCCCAGGAGTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	42150579	42057840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42059192_42060888_42062292_42072461_42073898_42150475
ES.2685.6	chr10	-	5927	3	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2110	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATGCCCAGGAGTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	42150582	42057841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150541
ES.2685.7	chr10	-	5348	3	NIC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCATGCCCAGGAGTCT	NA	False	NA	-8	True	AATAAA	-16	NA	42152690	42057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42062292_42150811_42151542_42152521
ES.2685.8	chr10	-	6993	4	NNC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	-856	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	59.9184631163235	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCATGCCCAGGAGTCT	NA	False	NA	-8	True	AATAAA	-16	NA	42153607	42057842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42062292_42072461_42073898_42150811_42151542_42153229
ES.26850.1	chr5	+	2112	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	23	-98	-6	98	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTAGACAGTGTTGTA	NA	False	NA	2	True	AGTAAA	-18	NA	115417747	115435129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.10	chr5	+	1999	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	34	4	5	-4	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCCTCAGATGTCACTT	NA	False	NA	17	True	AATAAA	-15	NA	115417758	115435027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.11	chr5	+	1816	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	35	186	6	-186	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	115417759	115434845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.12	chr5	+	1906	6	NIC	ENSMUSG00000041733.11	novel	2037	7	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	2	17	junction_4	204.721273931167	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCCTCAGATGTCACT	NA	False	NA	16	True	AATAAA	-14	NA	115417761	115435026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115433724_115433837_115433923
ES.26850.13	chr5	+	5784	6	NIC	ENSMUSG00000041733.11	novel	2037	7	NA	NA	8	-2	intron_retention	FALSE	canonical	3	502	junction_5	23.2	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTCAGATGTCACTTTT	NA	False	NA	19	True	AATAAA	-17	NA	115417761	115435029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115432975_115433724_115433837_115433923
ES.26850.14	chr5	+	1591	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	41	405	12	258	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACACGGTGTCTTACAA	NA	False	NA	NA	False	NA	NA	NA	115417765	115434626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.15	chr5	+	132	1	Intergenic	novelGene_22382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAATAGACATCAG	NA	False	NA	NA	False	AATAAA	-10	NA	115427895	115428027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115427900_115428000
ES.26850.3	chr5	+	1259	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	27	751	-2	-88	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTTCATAGTTTCTT	NA	False	NA	18	True	NA	NA	NA	115417751	115434280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.5	chr5	+	3568	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	29	-1560	0	1560	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCACAGACTTGTACAG	NA	False	NA	NA	False	AATAAA	-29	NA	115417753	115436591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ES.26850.6	chr5	+	1091	1	FSM	ENSMUSG00000041733.11	ENSMUST00000201429.2	1217	1	1	125	1	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	115417754	115418845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115417800_115418800
ES.26850.7	chr5	+	2644	8	NNC	ENSMUSG00000041733.11	novel	2037	7	NA	NA	2	1551	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	182.568186870393	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATTTTATAACCACAGA	NA	False	NA	NA	False	AATAAA	-20	NA	115417755	115436582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923_115434573_115435485
ES.26850.9	chr5	+	1725	5	NNC	ENSMUSG00000041733.11	novel	2037	7	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	227.787592945709	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGTCACTTTTTGGC	NA	False	NA	23	True	AATAAA	-21	NA	115417758	115435033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115417974_115421624_115421775_115422449_115422588_115433724_115433837_115433923
ES.26851.1	chr5	-	165	1	Intergenic	novelGene_22381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAAATAAATAA	3463	False	NA	NA	False	NA	NA	NA	115426039	115425874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115425900_115426000
ES.26852.1	chr5	-	2002	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	67	-39	2	39	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTTCTCATGCTCTTT	NA	False	NA	NA	False	AATACA	-17	NA	115438991	115435129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115436893_115438571_115438710_115438890
ES.26852.2	chr5	-	706	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	13	1311	13	1	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCTAGTTTGTTCAA	NA	False	NA	0	True	AATAAA	-17	NA	115439045	115436479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115436893_115438571_115438710_115438890
ES.26852.3	chr5	-	731	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1890	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTGCTAGTTTGTTC	NA	False	NA	-2	True	AATAAA	-15	NA	115438991	115436481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115436893_115438571_115438710_115438809
ES.26852.4	chr5	-	1709	3	FSM	ENSMUSG00000009013.6	ENSMUST00000127552.2	528	3	-48	-1133	7	-1	multi-exon	FALSE	canonical	0	0	junction_1	2102.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTGCTAGTTTGTTC	NA	False	NA	-2	True	AATAAA	-15	NA	115438986	115436481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115437957_115438571_115438710_115438890
ES.26852.5	chr5	-	2538	1	FSM	ENSMUSG00000009013.6	ENSMUST00000202980.2	2242	1	-298	2	-27	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTCTGCTAGTTTGTT	NA	False	NA	-3	True	AATAAA	-14	NA	115439020	115436482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115436500_115439000
ES.26852.6	chr5	-	3491	3	NNC	ENSMUSG00000009013.6	novel	729	2	NA	NA	-12772	-2	intron_retention	FALSE	canonical	0	0	junction_2	1892	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTCTGCTAGTTTGTT	NA	False	NA	-3	True	AATAAA	-14	NA	115451830	115436482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115436893_115438571_115441565_115451742
ES.26852.7	chr5	-	597	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	2	-19	at_least_one_novel_splicesite	FALSE	canonical	3	367	junction_2	1708.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTTACATTTGTAT	NA	False	NA	-23	True	TATAAA	-7	NA	115438991	115436582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115436893_115438571_115438710_115438842
ES.26853.1	chr5	-	158	1	Intergenic	novelGene_22383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6186	False	NA	NA	False	NA	NA	NA	115458427	115458269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115458300_115458400
ES.26854.1	chr5	+	176	1	Intergenic	novelGene_22384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTTTAAAAAA	5189	False	NA	NA	False	NA	NA	NA	115460538	115460714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115460500_115460700
ES.26855.1	chr5	-	2092	1	Intergenic	novelGene_22385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGATATGACTGCGTC	9609	False	NA	NA	False	AATAAA	-15	NA	115465104	115463012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115463000_115465100
ES.26856.1	chr5	+	1290	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-124	-4	-124	4	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCAGTTGTCTTTGATTG	10	True	NA	43	True	AATATA	-22	NA	115465111	115471143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26856.11	chr5	+	3305	4	NIC	ENSMUSG00000029538.15	novel	1392	6	NA	NA	6	-2	intron_retention	FALSE	canonical	3	16	junction_1	876.070900225674	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCGTGCAGTTGTCTT	140	False	NA	37	True	AATATA	-16	NA	115465241	115471137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115465559_115466405_115468718_115470175_115470349_115470634
ES.26856.12	chr5	+	4137	3	NIC	ENSMUSG00000029538.15	novel	767	4	NA	NA	20	-3	intron_retention	FALSE	canonical	3	1851	junction_1	23	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGCGTGCAGTTGTCT	154	False	NA	36	True	AATATA	-15	NA	115465255	115471136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115468718_115470175_115470349_115470634
ES.26856.14	chr5	+	2002	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	58	-898	58	898	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	192	False	NA	NA	False	NA	NA	NA	115465293	115472037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26856.15	chr5	+	4934	3	ISM	ENSMUSG00000029538.15	ENSMUST00000149510.2	767	4	557	-3922	557	3851	3prime_fragment	FALSE	canonical	3	26	junction_1	935.5	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	711	False	NA	NA	False	NA	NA	NA	115469193	115474990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115469599_115470175_115470349_115470634
ES.26856.16	chr5	+	5058	1	Genic_Genomic	ENSMUSG00000029538.15	novel	NA	NA	NA	NA	1296	3851	mono-exon	FALSE	NA	NA	NA	NA	NA	465	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	1450	False	NA	NA	False	NA	NA	NA	115469932	115474990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_115469900_115475000
ES.26856.17	chr5	+	2186	2	Antisense	novelGene_ENSMUSG00000029536.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	240	False	NA	NA	False	NA	NA	NA	115471932	115474990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_115472656_115473527
ES.26856.18	chr5	+	2340	2	Antisense	novelGene_ENSMUSG00000029536.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAAAAACTTGTT	977	False	NA	NA	False	NA	NA	NA	115473028	115476333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_115475257_115476221
ES.26856.2	chr5	+	991	4	NNC	ENSMUSG00000029538.15	novel	1162	4	NA	NA	-111	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	846.12935706598	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCGTGCAGTTGTCTT	23	False	NA	37	True	AATATA	-16	NA	115465124	115471137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115465559_115468556_115468718_115470175_115470278_115470843
ES.26856.3	chr5	+	1567	5	NIC	ENSMUSG00000029538.15	novel	1392	6	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	927.146967853533	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCGTGCAGTTGTCTT	85	False	NA	37	True	AATATA	-16	NA	115465186	115471137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115465559_115466405_115466764_115468556_115468718_115470175_115470349_115470634
ES.26856.4	chr5	+	3282	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-21	-2099	-21	2099	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGATGTCATATACTTA	113	False	NA	NA	False	NA	NA	NA	115465214	115473238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26856.5	chr5	+	5033	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-20	-3851	-20	3851	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGCAAACACTGGCG	114	False	NA	NA	False	NA	NA	NA	115465215	115474990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26856.6	chr5	+	4106	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	-17	-2927	-17	2927	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTATGTCTCT	117	False	NA	NA	False	TATAAA	-29	NA	115465218	115474066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26856.7	chr5	+	1258	5	NIC	ENSMUSG00000029538.15	novel	1392	6	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	900.890392889168	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCGTGCAGTTGTCTT	126	False	NA	37	True	AATATA	-16	NA	115465227	115471137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115465559_115468556_115468718_115469508_115469599_115470175_115470349_115470634
ES.26856.8	chr5	+	1678	5	NIC	ENSMUSG00000029538.15	novel	1392	6	NA	NA	-4	154	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	927.146967853533	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGACTCTGTTTTTT	130	False	NA	NA	False	NA	NA	NA	115465231	115471293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115465559_115466405_115466764_115468556_115468718_115470175_115470349_115470634
ES.26856.9	chr5	+	6370	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	0	-5208	0	5208	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTTTAAAATTTGTGT	134	False	NA	NA	False	NA	NA	NA	115465235	115476347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ES.26857.1	chr5	+	1082	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	-11	17	-11	-17	multi-exon	FALSE	canonical	3	209	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTGCTCCCAAAACCC	2403	False	NA	27	True	AATAAA	-19	NA	115479272	115481611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115479477_115480733
ES.26858.1	chr5	-	5275	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	8	-3486	8	3486	multi-exon	FALSE	canonical	3	122	junction_1	3.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAGCATATTCTCTAAA	9717	False	NA	NA	False	AATAAA	-18	NA	115479229	115467811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115472654_115473525_115473630_115478900
ES.26858.10	chr5	-	3303	1	NIC	ENSMUSG00000041697.10	novel	571	3	NA	NA	25	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCGTGAGCTGGACG	4879	False	NA	-38	True	AATAAA	-14	NA	115487015	115483712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115483700_115487000
ES.26858.12	chr5	-	525	3	NNC	ENSMUSG00000041697.10	novel	571	3	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3588.5	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCCGTGAGCTGGAC	4881	False	NA	-39	True	AATAAA	-13	NA	115487013	115483713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115483980_115486623_115486767_115486897
ES.26858.13	chr5	-	393	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	24	154	24	-139	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCCTTACTCTGTGTG	4878	False	NA	NA	False	NA	NA	NA	115487016	115483854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115483986_115486623_115486767_115486897
ES.26858.14	chr5	-	2904	1	NIC	ENSMUSG00000041697.10	novel	571	3	NA	NA	16	-405	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	609	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGGAAAGTTGACATT	4870	False	NA	NA	False	NA	NA	NA	115487024	115484120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115484100_115487000
ES.26858.15	chr5	-	889	1	NIC	ENSMUSG00000041697.10	novel	571	3	NA	NA	16	-2420	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	609	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTATAATGTCTCATG	4870	False	NA	NA	False	NA	NA	NA	115487024	115486135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115486100_115487000
ES.26858.2	chr5	-	2224	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	-3	-424	-3	424	multi-exon	FALSE	canonical	3	122	junction_1	3.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTAAGACTCTAATCAA	9706	False	NA	NA	False	AAGAAA	-11	NA	115479240	115470873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115472654_115473525_115473630_115478900
ES.26858.3	chr5	-	1803	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	-7	1	-7	-1	multi-exon	FALSE	canonical	3	122	junction_1	3.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTGCTGATTTTTTA	9702	False	NA	-2	True	NA	NA	NA	115479244	115471298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115472654_115473525_115473630_115478900
ES.26858.4	chr5	-	2120	4	Fusion	ENSMUSG00000041697.10_ENSMUSG00000029536.9	novel	1797	3	NA	NA	27	-23	intron_retention	FALSE	canonical	0	0	junction_2	3413.80348324596	690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAACAGAGTC	4881	False	NA	-24	True	NA	NA	NA	115487013	115471320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_115472654_115473525_115473630_115483692_115483986_115486623
ES.26858.5	chr5	-	2626	2	NIC	ENSMUSG00000029536.9	novel	1797	3	NA	NA	20	-23	intron_retention	FALSE	canonical	3	129	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAACAGAGTC	9729	False	NA	-24	True	NA	NA	NA	115479217	115471320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115473630_115478900
ES.26858.6	chr5	-	960	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	-7	844	-7	-844	multi-exon	FALSE	canonical	3	122	junction_1	3.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGAACCATCTTTCTT	9702	False	NA	NA	False	AGTAAA	-19	NA	115479244	115472141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115472654_115473525_115473630_115478900
ES.26858.7	chr5	-	770	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	-26	1053	-26	-1053	multi-exon	FALSE	canonical	3	122	junction_1	3.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTATGTGGACTTT	9683	False	NA	NA	False	AAAACA	-41	NA	115479263	115472350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115472654_115473525_115473630_115478900
ES.26858.8	chr5	-	6424	3	FSM	ENSMUSG00000029536.9_ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	37	-5890	-30	5890	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGGGAGAGAATAGAAT	4891	False	NA	NA	False	AATAAA	-16	NA	115487003	115477810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115483986_115486623_115486767_115486897
ES.26858.9	chr5	-	574	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	-4	1	-4	-1	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGACGGTACGATTTTA	4850	False	NA	-27	True	AATAAA	-25	NA	115487044	115483701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115483986_115486623_115486767_115486897
ES.26859.1	chr5	-	153	1	Antisense	novelGene_ENSMUSG00000107288.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTCCATTCCCCCCAAA	9630	False	NA	NA	False	AATAAA	-45	NA	115490848	115490695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115490700_115490800
ES.2686.1	chr10	+	177	1	Intergenic	novelGene_2047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	42318486	42318663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42318500_42318700
ES.26860.1	chr5	+	2972	13	Fusion	ENSMUSG00000087292.2_ENSMUSG00000054256.12	novel	806	9	NA	NA	-1	-3	multi-exon	FALSE	canonical	2	9	junction_2	31.6227766016838	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGCCTTTATTCATGT	4781	False	NA	12	True	AATAAA	-12	NA	115497154	115593754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.10	chr5	+	3597	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	-7	intron_retention	FALSE	canonical	3	46	junction_12	14.2915541740589	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	2400	False	NA	8	True	AATAAA	-8	NA	115567668	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589580_115591884
ES.26860.11	chr5	+	2186	5	NNC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.6112965431264	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	2407	False	NA	8	True	AATAAA	-8	NA	115567675	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115567741_115588306_115588343_115588878_115589034_115589515_115589580_115591884
ES.26860.12	chr5	+	2975	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	-36	-4	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	25.6750287359472	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGCCTTTATTCATG	2453	False	NA	11	True	AATAAA	-11	NA	115567721	115593753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588878_115589034_115589515_115589580_115591884
ES.26860.13	chr5	+	2862	13	NNC	ENSMUSG00000054256.12	novel	1254	14	NA	NA	-72	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.544182208751	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGCCTTTATTCATGT	2715	False	NA	12	True	AATAAA	-12	NA	115567983	115593754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115568077_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578630_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
ES.26860.14	chr5	+	2904	13	ISM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	997	7	-9	-7	3prime_fragment	FALSE	canonical	3	46	junction_10	15.3267648974669	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	3386	False	NA	8	True	AATAAA	-8	NA	115568654	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.15	chr5	+	2909	10	ISM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	5614	7	217	-7	3prime_fragment	FALSE	canonical	3	46	junction_7	14.3913554299486	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	8003	False	NA	8	True	AATAAA	-8	NA	115573271	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.16	chr5	+	2204	7	NNC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	9016	-306	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.9087828675043	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTTTATCTTTAATT	7395	False	NA	NA	False	AATAAA	-18	NA	115582572	115593451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115582751_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.17	chr5	+	2229	7	NNC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	9257	-308	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	34.2296168057235	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGATTTTATCTTTAA	7636	False	NA	NA	False	AATAAA	-16	NA	115582813	115593449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115583019_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.2	chr5	+	2890	12	Fusion	ENSMUSG00000087292.2_ENSMUSG00000054256.12	novel	806	9	NA	NA	20	-7	multi-exon	FALSE	canonical	2	8	junction_8	37.1837074425555	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	4802	False	NA	8	True	AATAAA	-8	NA	115497175	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.3	chr5	+	180	1	Intergenic	novelGene_22387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTCCAAAACA	2062	False	NA	NA	False	NA	NA	NA	115502733	115502913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115502700_115502900
ES.26860.4	chr5	+	3594	1	Intergenic	novelGene_22388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAATAGTAAAG	3206	False	NA	NA	False	NA	NA	NA	115509916	115513510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115509900_115513500
ES.26860.5	chr5	+	2928	1	Intergenic	novelGene_22390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTCTGGGGAGGTGG	NA	False	NA	NA	False	NA	NA	NA	115530071	115532999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115530100_115533000
ES.26860.6	chr5	+	3035	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	-241	-306	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATTTTATCTTTAATT	2148	False	NA	NA	False	AATAAA	-18	NA	115567416	115593451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
ES.26860.7	chr5	+	3090	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	2392	False	NA	8	True	AATAAA	-8	NA	115567660	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
ES.26860.8	chr5	+	3123	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	10	0	10	0	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2399	False	NA	15	True	AATAAA	-15	NA	115567667	115593757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26860.9	chr5	+	3058	14	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	11	-7	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	24.7218849935262	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACTTGCCTTTATTC	2400	False	NA	8	True	AATAAA	-8	NA	115567668	115593750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ES.26861.1	chr5	-	186	1	Intergenic	novelGene_22386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115500884	115500698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115500700_115500900
ES.26862.1	chr5	-	3796	1	Antisense	novelGene_ENSMUSG00000087292.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAGAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	115510005	115506209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115506200_115510000
ES.26863.1	chr5	-	175	1	Intergenic	novelGene_22389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	3970	False	NA	NA	False	NA	NA	NA	115516673	115516498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115516500_115516700
ES.26864.1	chr5	-	184	1	Intergenic	novelGene_22391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	115551941	115551757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115551800_115551900
ES.26865.1	chr5	-	1859	1	Intergenic	novelGene_22392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCGGGATTCCCTGGA	NA	False	NA	NA	False	NA	NA	NA	115583431	115581572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115581600_115583400
ES.26865.2	chr5	-	3248	1	Antisense	novelGene_ENSMUSG00000054256.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTTTTAAGGAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	115585058	115581810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115581800_115585100
ES.26865.3	chr5	-	2799	6	Antisense	novelGene_ENSMUSG00000054256.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	115592627	115581822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_115583533_115585187_115585243_115588270_115588340_115588875_115589033_115589514_115589578_115591882
ES.26866.1	chr5	+	155	1	Intergenic	novelGene_22393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	115601524	115601679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115601500_115601700
ES.26867.1	chr5	+	899	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1461	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	935.084588419679	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTTGGTGATTGTTA	NA	False	NA	26	True	AATAAA	-17	NA	115602859	115612777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603082_115604200_115604380_115608840_115609001_115610051_115610180_115612567
ES.26867.10	chr5	+	3650	2	NNC	ENSMUSG00000029522.13	novel	419	3	NA	NA	-1153	-2137	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	0	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGACTATAGGTAGAC	NA	False	NA	NA	False	NA	NA	NA	115603167	115607769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604230
ES.26867.11	chr5	+	4418	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1153	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1105.73123115681	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGTTTTGGTGATTG	NA	False	NA	23	True	AATAAA	-14	NA	115603167	115612774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200_115607680_115609558_115610180_115612567
ES.26867.12	chr5	+	3678	2	NNC	ENSMUSG00000029522.13	novel	419	3	NA	NA	-1151	-2137	at_least_one_novel_splicesite	FALSE	canonical	3	2521	junction_1	0	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGACTATAGGTAGAC	NA	False	NA	NA	False	NA	NA	NA	115603169	115607769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200
ES.26867.13	chr5	+	346	1	Intergenic	novelGene_22394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGGCAGTCTGTTCTT	NA	False	NA	NA	False	TTTAAA	-10	NA	115603428	115603774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115603400_115603800
ES.26867.14	chr5	+	499	3	ISM	ENSMUSG00000029522.13	ENSMUST00000031495.11	557	4	4513	6	4507	-6	3prime_fragment	FALSE	canonical	3	2118	junction_2	25	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTTGGTGATTGT	3191	False	NA	24	True	AATAAA	-15	NA	115608837	115612775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115609001_115610051_115610180_115612567
ES.26867.2	chr5	+	662	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1189	-6	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_2	947.073738769409	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTTGGTGATTGT	NA	False	NA	24	True	AATAAA	-15	NA	115603131	115612775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200_115604380_115610051_115610180_115612567
ES.26867.3	chr5	+	618	4	NNC	ENSMUSG00000029522.13	novel	361	3	NA	NA	-1167	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	1117.44122390795	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTCGAGTCATTCTCC	NA	False	NA	NA	False	AATAAA	-21	NA	115603153	115609908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115609754
ES.26867.4	chr5	+	806	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1167	0	at_least_one_novel_splicesite	FALSE	canonical	3	2118	junction_4	157.856540884437	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115603153	115612781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200_115604380_115608840_115609001_115610051_115610180_115612567
ES.26867.5	chr5	+	765	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1156	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	919.504588079907	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115603164	115612781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604230_115604380_115608840_115609001_115610051_115610180_115612567
ES.26867.6	chr5	+	3477	2	NNC	ENSMUSG00000029522.13	novel	419	3	NA	NA	-1155	-2342	at_least_one_novel_splicesite	FALSE	canonical	3	2521	junction_1	0	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115603165	115607564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604200
ES.26867.8	chr5	+	596	4	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1153	-6	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	916.615634943143	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTTGGTGATTGT	NA	False	NA	24	True	AATAAA	-15	NA	115603167	115612775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115603279_115604230_115604380_115610051_115610180_115612567
ES.26868.1	chr5	-	2846	5	NNC	ENSMUSG00000029524.17	novel	853	3	NA	NA	-37	1181	intron_retention	FALSE	non_canonical	0	0	junction_1	20.7650547796051	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAAAAGAAGAGA	9342	False	NA	NA	False	NA	NA	NA	115622462	115614887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115615283_115616578_115617248_115617369_115618585_115620682_115621178_115622390
ES.26868.2	chr5	-	1472	5	NNC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2002747232013	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTGTGGACTGTGA	9370	False	NA	NA	False	AATAAA	-17	NA	115622434	115616070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115616468_115617660_115617855_115618242_115618585_115620682_115621178_115622390
ES.26868.3	chr5	-	2730	3	NNC	ENSMUSG00000029524.17	novel	853	3	NA	NA	-56	1	intron_retention	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTGTGGACTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	115620971	115616070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115617248_115617369_115618585_115620633
ES.26868.4	chr5	-	765	3	NNC	ENSMUSG00000029524.17	novel	1645	5	NA	NA	-466	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	17.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTGTGGACTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	115618463	115616070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115616468_115617660_115617855_115618289
ES.26868.5	chr5	-	1471	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	321	2	-38	1	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGTGTGGACTGTGA	9341	False	NA	NA	False	AATAAA	-17	NA	115622463	115616070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
ES.26868.6	chr5	-	2924	4	NNC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_1	19.8158185969358	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAATGTGTGGACTGT	9375	False	NA	NA	False	AATAAA	-15	NA	115622429	115616072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115617248_115617369_115618585_115620682_115621178_115622390
ES.26868.7	chr5	-	2512	5	NNC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8480768249708	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAATGTGTGGACTGT	9369	False	NA	NA	False	AATAAA	-15	NA	115622435	115616072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115617248_115617369_115617872_115618289_115618585_115620682_115621178_115622390
ES.26868.8	chr5	-	1861	4	NIC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	34	junction_2	5.31245915016974	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAATGTGTGGACTGT	9367	False	NA	NA	False	AATAAA	-15	NA	115622437	115616072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115616468_115617660_115618585_115620682_115621178_115622390
ES.26868.9	chr5	-	1227	4	NIC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.8158185969358	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAACAAATGTGTGGACT	9370	False	NA	NA	False	AATAAA	-13	NA	115622434	115616074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115616468_115618289_115618585_115620682_115621178_115622390
ES.26869.1	chr5	+	3811	11	NNC	ENSMUSG00000029528.20	novel	3484	4	NA	NA	-14779	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.8219668849415	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115629955	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115630254_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.10	chr5	+	2539	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	28	1139	-7	-130	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTTTTGTACTCTGGT	NA	False	NA	NA	False	TTTAAA	-5	NA	115644762	115692907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.11	chr5	+	386	2	NIC	ENSMUSG00000029528.20	novel	3761	10	NA	NA	-7	-28889	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACCGTGTGTGTGTGTG	NA	False	NA	NA	False	CATAAA	-13	NA	115644762	115654053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115644928_115653832
ES.26869.12	chr5	+	3225	12	NNC	ENSMUSG00000029528.20	novel	2667	12	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	82.857839023253	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATGTTATTTCTTGGG	NA	False	NA	18	True	AATAAA	-22	NA	115644762	115694045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927_115693433_115693884
ES.26869.14	chr5	+	2644	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-103	126	-6	-126	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTACTCTGGTCTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	115644763	115692911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.17	chr5	+	3848	11	NIC	ENSMUSG00000029528.20	novel	2667	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	21	junction_6	101.467285368241	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCGAGCTGATGTTATT	NA	False	NA	11	True	AATAAA	-15	NA	115644768	115694038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.18	chr5	+	3668	11	NNC	ENSMUSG00000029528.20	novel	3484	4	NA	NA	240	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.8219668849415	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGAGCTGATGTTATTTC	NA	False	NA	13	True	AATAAA	-17	NA	115654653	115694040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115654815_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.19	chr5	+	3644	11	NNC	ENSMUSG00000029528.20	novel	3484	4	NA	NA	6021	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.8219668849415	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGAGCTGATGTTATTTC	NA	False	NA	13	True	AATAAA	-17	NA	115664384	115694040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115664522_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.2	chr5	+	183	1	Intergenic	novelGene_22396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7297	False	NA	NA	False	NA	NA	NA	115639342	115639525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115639300_115639500
ES.26869.20	chr5	+	3592	11	NNC	ENSMUSG00000029528.20	novel	3484	4	NA	NA	-1989	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.095579047105	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGAGCTGATGTTATTT	NA	False	NA	12	True	AATAAA	-16	NA	115678983	115694039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115679069_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690161_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.21	chr5	+	3694	11	NIC	ENSMUSG00000029528.20	novel	898	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	85.531046994644	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCTGATGTTATTTCT	NA	False	NA	14	True	AATAAA	-18	NA	115680934	115694041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115681121_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.22	chr5	+	3621	11	NIC	ENSMUSG00000029528.20	novel	843	6	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.8219668849415	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115681038	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115681147_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.23	chr5	+	3679	12	NIC	ENSMUSG00000029528.20	novel	898	6	NA	NA	42	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	116.540136029546	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGAGCTGATGTTATTTC	NA	False	NA	13	True	AATAAA	-17	NA	115681050	115694040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115681121_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.24	chr5	+	2359	11	NNC	ENSMUSG00000029528.20	novel	898	6	NA	NA	79	-198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.8219668849415	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTCGTATGGCTCAAG	NA	False	NA	NA	False	NA	NA	NA	115681087	115692839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115681141_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.25	chr5	+	2787	6	NNC	ENSMUSG00000029528.20	novel	3189	15	NA	NA	3118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.697215048175	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATGTTATTTCTTGGG	NA	False	NA	18	True	AATAAA	-22	NA	115686480	115694045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115686574_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.3	chr5	+	201	1	Intergenic	novelGene_22397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTTCAGGAT	7512	False	NA	NA	False	NA	NA	NA	115639557	115639758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115639600_115639800
ES.26869.4	chr5	+	3705	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	1	0	1	0	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644735	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.5	chr5	+	3807	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-131	-1009	1	0	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644735	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.6	chr5	+	3784	12	NNC	ENSMUSG00000029528.20	novel	2667	12	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	101.546634647656	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644752	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689552_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.7	chr5	+	4173	10	NIC	ENSMUSG00000029528.20	novel	3706	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	245	junction_6	21.2811862660165	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644753	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690905_115691036_115691186_115691927
ES.26869.8	chr5	+	3756	10	NIC	ENSMUSG00000029528.20	novel	3706	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	245	junction_6	22.6655773158711	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGAGCTGATGTTATTTC	NA	False	NA	13	True	AATAAA	-17	NA	115644760	115694040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690337_115690822_115690905_115691036_115691186_115691927
ES.26869.9	chr5	+	8580	10	NIC	ENSMUSG00000029528.20	novel	3706	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	248	junction_3	19.3045763140937	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644762	115694046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ES.2687.1	chr10	+	3334	2	Antisense	novelGene_ENSMUSG00000038302.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAACAACAAAAAAAAAA	7064	False	NA	NA	False	NA	NA	NA	42341235	42345431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_42341639_42342500
ES.26870.1	chr5	-	187	1	Intergenic	novelGene_22395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTTGTTTTTTAAGGCA	NA	False	NA	-2	True	NA	NA	NA	115637065	115636878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115636900_115637100
ES.26871.1	chr5	-	2492	1	Intergenic	novelGene_22398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCCCAATTTCCTCTA	NA	False	NA	NA	False	NA	NA	NA	115680192	115677700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115677700_115680200
ES.26871.2	chr5	-	322	1	Intergenic	novelGene_22399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAGGCCTAGTCTAAT	NA	False	NA	NA	False	NA	NA	NA	115679048	115678726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115678700_115679000
ES.26872.1	chr5	-	130	1	Intergenic	novelGene_22400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115695101	115694971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115695000_115695100
ES.26873.1	chr5	+	1178	7	NNC	ENSMUSG00000067274.11	novel	694	3	NA	NA	-2152	-209	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8177.45098154404	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCTGGATTTATTTAGTT	NA	False	NA	28	True	AATAAA	-22	NA	115695373	115701577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115695476_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.10	chr5	+	3786	3	NNC	ENSMUSG00000067274.11	novel	694	3	NA	NA	-23	-217	intron_retention	FALSE	non_canonical	1	4	junction_2	3598.5	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCCGGTCTGGATTT	NA	False	NA	20	True	AATAAA	-14	NA	115697572	115701569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115699064_115699157_115699620_115699736
ES.26873.14	chr5	+	1085	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9265.50261273865	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697572	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699393_115699578_115700484_115700618_115701341
ES.26873.15	chr5	+	2194	5	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	-216	intron_retention	FALSE	canonical	3	6763	junction_4	4510.81835008904	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697572	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.16	chr5	+	983	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	-217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8282.76607212564	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCCGGTCTGGATTT	NA	False	NA	20	True	AATAAA	-14	NA	115697572	115701569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699252_115699449_115699578_115700484_115700626_115701341
ES.26873.19	chr5	+	1210	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	47	101	-23	-101	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	3550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGGCTTTGTTTGTTT	NA	False	NA	16	True	ATTAAA	-13	NA	115697572	115701685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.2	chr5	+	1156	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	-6	208	-6	-208	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGATTTATTTAGTTT	NA	False	NA	29	True	AATAAA	-23	NA	115697519	115701578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.20	chr5	+	1089	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	-218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9318.13720058301	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACTCCGGTCTGGATT	NA	False	NA	19	True	AATAAA	-13	NA	115697572	115701568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699389_115699578_115700484_115700626_115701347
ES.26873.21	chr5	+	1088	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7997.5735834203	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697572	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699164_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.23	chr5	+	2996	3	NIC	ENSMUSG00000067274.11	novel	854	6	NA	NA	-22	-216	intron_retention	FALSE	canonical	3	7201	junction_1	5203	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115699064_115699157_115699578_115700484
ES.26873.27	chr5	+	1031	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7997.5735834203	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699025_115699181_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.28	chr5	+	1031	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	6006.57260608928	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698862_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.29	chr5	+	1088	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6009.36112568457	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697942_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.3	chr5	+	1367	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	-2	-7	-2	7	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	3550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGGCCTTTATATTCC	NA	False	NA	10	True	ATTAAA	-21	NA	115697523	115701793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.30	chr5	+	1107	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6009.36112568457	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698786_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.36	chr5	+	951	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7997.5735834203	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115698971_115699207_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.38	chr5	+	1077	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7950.63075065956	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699565_115700488_115700626_115701341
ES.26873.39	chr5	+	2847	5	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	intron_retention	FALSE	non_canonical	1	4	junction_4	9242.09327952818	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699620_115699736
ES.26873.4	chr5	+	1343	6	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-24	-216	intron_retention	FALSE	canonical	3	6763	junction_5	6890.1060833633	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697571	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.41	chr5	+	1082	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	canonical	1	97	junction_4	8259.3334073237	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699403_115699578_115700484_115700626_115701341
ES.26873.43	chr5	+	998	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6009.08222794648	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698895_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.44	chr5	+	1196	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8282.76607212564	3550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGTTTTTTGAGAC	NA	False	NA	24	True	ATTAAA	-21	NA	115697573	115701693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699412_115699578_115700484_115700626_115701341
ES.26873.45	chr5	+	1049	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-218	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	6007.40905512148	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAACTCCGGTCTGGATT	NA	False	NA	19	True	AATAAA	-13	NA	115697573	115701568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698842_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.46	chr5	+	1089	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-22	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8178.1655118302	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697573	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697592_115697843_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.48	chr5	+	949	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-21	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8282.76607212564	3549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697574	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699276_115699506_115699578_115700484_115700626_115701341
ES.26873.49	chr5	+	2054	5	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-20	-217	intron_retention	FALSE	canonical	3	7201	junction_2	6546.74999522664	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCCGGTCTGGATTT	NA	False	NA	20	True	AATAAA	-14	NA	115697575	115701569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484
ES.26873.51	chr5	+	705	4	ISM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	1630	216	1474	-216	3prime_fragment	FALSE	canonical	3	6763	junction_3	4461.56118665005	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115699155	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.52	chr5	+	496	2	ISM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	2957	92	2801	-92	3prime_fragment	FALSE	canonical	3	6763	junction_1	0	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTTTTTTGAGACA	NA	False	NA	25	True	ATTAAA	-22	NA	115700482	115701694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115700626_115701341
ES.26873.7	chr5	+	1558	6	NIC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	-23	0	intron_retention	FALSE	canonical	3	6763	junction_5	6890.1060833633	3550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCAAGCCTGGCCTTT	NA	False	NA	3	True	ATTAAA	-14	NA	115697572	115701786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ES.26873.8	chr5	+	3029	3	NNC	ENSMUSG00000067274.11	novel	694	3	NA	NA	-23	-216	intron_retention	FALSE	non_canonical	1	4	junction_2	12596	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCGGTCTGGATTTA	NA	False	NA	21	True	AATAAA	-15	NA	115697572	115701570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115697948_115698799_115699620_115699736
ES.26874.1	chr5	+	8560	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-6	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	93.4190115912448	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTTGTCATTTTTTGA	NA	False	NA	NA	False	AATAAA	-27	NA	115703306	115760717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719066_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.100	chr5	+	6756	28	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-8841	0	intron_retention	FALSE	non_canonical	0	0	junction_21	118.506446144409	668	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115734913	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753658_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.101	chr5	+	5203	30	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	31601	6	-8841	0	3prime_fragment	FALSE	canonical	2	419	junction_5	67.5535987488742	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115734913	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.103	chr5	+	4876	28	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-8316	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	118.185608829632	668	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115735438	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742075_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.104	chr5	+	4526	26	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-8304	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	120.969920228129	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115735450	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.105	chr5	+	4820	27	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	33445	1	-6997	-1	3prime_fragment	FALSE	canonical	2	419	junction_2	70.1754352745769	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115736757	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.106	chr5	+	4651	26	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	33816	4	-6626	2	3prime_fragment	FALSE	canonical	2	419	junction_1	70.3704483430367	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115737128	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.108	chr5	+	7754	21	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-6498	-1	intron_retention	FALSE	canonical	3	419	junction_1	74.2144696134117	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115737256	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115737326_115740444_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.109	chr5	+	4565	25	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	37024	1	-3418	-1	3prime_fragment	FALSE	canonical	2	426	junction_3	68.7082701637066	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115740336	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.11	chr5	+	8748	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-5	0	intron_retention	FALSE	canonical	2	352	junction_15	70.4387466389148	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGAGTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	115703325	115760713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.110	chr5	+	4226	25	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-3099	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	159.849098761926	664	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115740655	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115740692_115741271_115741394_115742071_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754587_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.111	chr5	+	4516	1	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-2859	-3262	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAACTTGGCCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	115740895	115745411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115740900_115745400
ES.26874.112	chr5	+	4197	23	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1689	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	128.532603510896	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115742065	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751686_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.114	chr5	+	4030	23	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1637	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	128.629721961531	664	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115742117	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759568_115759779_115760083
ES.26874.115	chr5	+	5319	21	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-879	2	intron_retention	FALSE	canonical	2	428	junction_14	65.74258513323	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115742875	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.116	chr5	+	3974	22	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	39563	1	-879	-1	3prime_fragment	FALSE	canonical	2	428	junction_15	65.2474445855415	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115742875	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.117	chr5	+	3794	21	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	41218	1	776	-1	3prime_fragment	FALSE	canonical	2	428	junction_14	62.8019904143173	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115744530	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.118	chr5	+	4390	20	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	928	2	intron_retention	FALSE	canonical	3	434	junction_18	58.7832772496611	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115744682	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.119	chr5	+	3519	21	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-611	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.155651400908	663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115747285	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115747357_115747524_115747664_115747749_115747774_115747825_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.12	chr5	+	8541	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	111.028549812647	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703325	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719200_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730132_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.120	chr5	+	3523	19	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-374	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	135.549908807707	663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115747522	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757692_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.121	chr5	+	3140	18	NNC	ENSMUSG00000041638.19	novel	3857	22	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	141.740905983649	663	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115747920	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752969_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.122	chr5	+	4246	15	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	199	-1	intron_retention	FALSE	canonical	3	434	junction_13	65.4585084349667	663	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115748095	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.123	chr5	+	4463	14	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	337	2	intron_retention	FALSE	canonical	2	428	junction_7	71.1538045737924	662	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115748233	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115748985_115749082_115749299_115750646_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.124	chr5	+	4388	12	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	150	2	intron_retention	FALSE	canonical	3	434	junction_10	62.4767064030684	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115750039	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.125	chr5	+	3516	12	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	885	2	intron_retention	FALSE	canonical	3	434	junction_10	63.5235363422211	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115750774	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.126	chr5	+	4022	11	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	982	2	intron_retention	FALSE	canonical	3	434	junction_9	64.3692473157796	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115750871	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.127	chr5	+	5659	6	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-343	-1	intron_retention	FALSE	canonical	3	434	junction_4	85.4086646658288	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115752587	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115752660_115752919_115753034_115753427_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.128	chr5	+	2139	9	NNC	ENSMUSG00000041638.19	novel	3857	22	NA	NA	53	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.108140996331	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115752983	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115753034_115753427_115754009_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.129	chr5	+	5073	7	NIC	ENSMUSG00000041638.19	novel	3857	22	NA	NA	68	2	intron_retention	FALSE	canonical	3	434	junction_5	82.1754559193653	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115752998	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115753034_115753427_115754604_115754692_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.13	chr5	+	8650	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_46	92.7732801080172	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703325	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751686_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.130	chr5	+	6125	4	NIC	ENSMUSG00000041638.19	novel	3857	22	NA	NA	1002	2	intron_retention	FALSE	canonical	3	538	junction_1	63.4052223576436	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115753932	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115754604_115754692_115757453_115757710_115759779_115760083
ES.26874.131	chr5	+	3631	3	NIC	ENSMUSG00000041638.19	novel	3857	22	NA	NA	2597	-1	intron_retention	FALSE	canonical	3	434	junction_1	129.5	661	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115755527	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115758311_115759559_115759779_115760083
ES.26874.14	chr5	+	5920	39	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	105.035780739028	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703326	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718643_115735221_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.15	chr5	+	8533	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	111.763683548349	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703327	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726030_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741381_115742065_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.16	chr5	+	10094	56	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	2	intron_retention	FALSE	canonical	2	352	junction_15	71.0553363685394	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGTTTGTCATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	115703329	115760715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.17	chr5	+	8434	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	93.7199407592555	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703329	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.18	chr5	+	4438	34	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	-11046	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_26	109.718958117691	459	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAACTCCATACAGA	NA	False	NA	NA	False	TTTAAA	-19	NA	115703329	115737627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115732521_115732578_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130
ES.26874.19	chr5	+	8446	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	111.611401547382	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703329	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728393_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733498_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.22	chr5	+	8519	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	137.547442219723	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGAGTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	115703329	115760713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709567_115712641_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733127_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753431_115753658_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.23	chr5	+	1837	16	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	17	36549	-1	-1313	5prime_fragment	FALSE	canonical	3	352	junction_15	43.1366819926305	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTATCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	115703329	115724164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864
ES.26874.24	chr5	+	8651	59	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	110.690188257391	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703329	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115733818_115733936_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.27	chr5	+	8533	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	110.842441256162	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115703329	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723861_115723958_115725847_115725924_115726034_115726195_115726992_115727187_115727265_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.29	chr5	+	10155	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	2	intron_retention	TRUE	canonical	0	0	junction_42	113.140275691157	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703330	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742075_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748591_115748698_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.3	chr5	+	8752	57	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	intron_retention	FALSE	canonical	2	3	junction_35	93.5719721221944	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703313	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742075_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.30	chr5	+	1714	17	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	-1307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	111.614781167191	338	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGTCTGTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	115703330	115724170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115724085
ES.26874.33	chr5	+	9884	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	-1	intron_retention	FALSE	canonical	2	352	junction_15	71.2685506641991	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703330	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.35	chr5	+	8419	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_49	91.918629443522	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703330	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.37	chr5	+	8882	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	2	intron_retention	FALSE	canonical	2	352	junction_15	70.9494444003213	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGTTTGTCATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	115703330	115760715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.38	chr5	+	8375	57	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_45	111.696084560393	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703330	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753663_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.39	chr5	+	8209	56	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_44	94.271918993642	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703330	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.40	chr5	+	8621	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	88.6945540326506	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703330	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759864_115760083
ES.26874.41	chr5	+	5107	33	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	19	22359	1	-10319	5prime_fragment	FALSE	canonical	3	352	junction_15	41.659660869359	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGTTCTTTGGTATC	NA	False	NA	NA	False	NA	NA	NA	115703331	115738354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130
ES.26874.42	chr5	+	10161	55	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_10	94.9564715092209	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703331	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719066_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.43	chr5	+	12424	52	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	2	intron_retention	FALSE	canonical	2	21	junction_47	95.1295601692401	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703331	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748985_115749082_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754694_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.44	chr5	+	8664	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	93.8727749471039	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGAGTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	115703331	115760713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115737054_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.45	chr5	+	8526	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	93.758361482053	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703331	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730132_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.46	chr5	+	8797	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_26	110.088766333177	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703331	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115732521_115732578_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.47	chr5	+	11231	55	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	2	intron_retention	FALSE	canonical	3	352	junction_15	72.1651460127379	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703334	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.48	chr5	+	8643	59	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.412582915679	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703334	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115709757_115709869_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.5	chr5	+	6902	49	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	94.769154836019	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703319	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748945_115754708_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.53	chr5	+	8525	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5758128393123	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703335	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709473_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.57	chr5	+	8523	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	111.378206824185	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703335	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730568_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748872_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.59	chr5	+	4387	33	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	23	23075	1	-11035	5prime_fragment	FALSE	canonical	3	352	junction_15	41.659660869359	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATACAGAAGCCAACATGG	NA	False	NA	NA	False	TTTAAA	-30	NA	115703335	115737638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130
ES.26874.60	chr5	+	8322	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	94.2719645800655	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703335	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717738_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.63	chr5	+	8770	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	124.551170817647	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGAAGCAGGAGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	115703337	115760706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721603_115723872_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115732521_115732578_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.66	chr5	+	5294	39	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	100.355269196	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703339	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736832_115754407_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.67	chr5	+	8530	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	92.9153283011073	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115703340	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719200_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.68	chr5	+	8462	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_20	93.1424641133902	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGGAGTTTGTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	115703342	115760710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728363_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.69	chr5	+	8540	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	93.1199347776883	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115703343	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751760_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.71	chr5	+	8802	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	12	2	intron_retention	FALSE	non_canonical	0	0	junction_20	94.5785012175705	675	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115703346	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727385_115728303_115728485_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.72	chr5	+	8576	59	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_26	109.881003898927	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703346	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115732521_115732578_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.74	chr5	+	8506	57	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	6150	1	6101	-1	3prime_fragment	FALSE	canonical	2	352	junction_14	70.7473925927554	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115709462	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.75	chr5	+	8703	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6101	2	intron_retention	FALSE	canonical	0	0	junction_32	94.3190050347426	674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115709462	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740450_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.76	chr5	+	8495	57	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	94.3929703123477	674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115709462	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740686_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.77	chr5	+	8458	57	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6101	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	94.2153620105315	674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAGTTTGTCATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	115709462	115760715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740495_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.78	chr5	+	8500	57	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6101	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	94.4073468015177	674	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115709462	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748872_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.8	chr5	+	8126	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	112.364960274637	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703323	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728393_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.81	chr5	+	11790	52	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	6103	0	intron_retention	FALSE	canonical	3	352	junction_14	72.6392761304454	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAGCAGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	115709464	115760707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748985_115749082_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115754604_115754692_115754808_115757355_115757453_115757710_115758311_115759559_115759779_115760083
ES.26874.83	chr5	+	8391	56	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-7793	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	127.718505037154	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115712662	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730568_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742067_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758183_115758311_115759559_115759779_115760083
ES.26874.84	chr5	+	8204	54	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	10864	1	-6279	-1	3prime_fragment	FALSE	canonical	2	352	junction_11	72.0975220641407	674	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115714176	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.85	chr5	+	7579	48	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-1360	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	100.863021106394	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115719095	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748231_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.86	chr5	+	7431	46	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	16519	4	-624	2	3prime_fragment	FALSE	canonical	2	352	junction_3	74.1051771737347	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115719831	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.87	chr5	+	7931	45	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-544	2	intron_retention	FALSE	canonical	2	352	junction_3	74.9400966006343	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115719911	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.88	chr5	+	7357	46	NNC	ENSMUSG00000041638.19	novel	465	4	NA	NA	-366	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.691996844502	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115720089	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115720120_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.89	chr5	+	7118	44	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	1024	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	103.154732631377	673	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115721479	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732265_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.9	chr5	+	8369	58	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	93.8727749471039	675	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115703323	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736905_115737283_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.90	chr5	+	6998	43	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	20551	4	3408	2	3prime_fragment	FALSE	canonical	2	355	junction_1	72.1570825201735	673	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115723863	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.92	chr5	+	6483	39	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	23945	1	6802	-1	3prime_fragment	FALSE	canonical	2	380	junction_5	69.6231098402155	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115727257	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.93	chr5	+	6279	38	NNC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	7916	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.859422232755	668	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115728371	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734920_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753663_115754416_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.94	chr5	+	6085	36	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	26809	1	9666	-1	3prime_fragment	FALSE	canonical	2	380	junction_2	69.8394660661732	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGAGTTTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	115730121	115760712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.96	chr5	+	5765	34	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	28322	7	11179	-1	3prime_fragment	FALSE	canonical	2	404	junction_3	68.6674556642467	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGAAGCAGGAGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	115731634	115760706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.97	chr5	+	7274	30	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-11403	2	intron_retention	FALSE	canonical	3	404	junction_1	67.2168478681982	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115732351	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.98	chr5	+	5431	32	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	29737	4	-10705	2	3prime_fragment	FALSE	canonical	2	404	junction_1	68.4296428821164	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115733049	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26874.99	chr5	+	5411	29	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	-8841	2	intron_retention	FALSE	canonical	2	419	junction_5	68.3483350050254	668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGGAGTTTGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115734913	115760709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ES.26875.1	chr5	-	180	1	Intergenic	novelGene_22401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115768405	115768225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115768200_115768400
ES.26876.1	chr5	+	2266	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	-18	572	-18	-572	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCACTTGTCCAAATTGT	NA	False	NA	23	True	AATAAA	-25	NA	115769948	115785223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ES.26876.2	chr5	+	2831	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGGGTCTGTCTGCTC	NA	False	NA	25	True	AATAAA	-21	NA	115769955	115785795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ES.26876.4	chr5	+	1606	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	1	1213	1	404	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGTTCCTCACGATTA	NA	False	NA	NA	False	AATACA	-23	NA	115769967	115784582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ES.26876.5	chr5	+	2318	5	NIC	ENSMUSG00000029518.16	novel	2820	6	NA	NA	5	-579	intron_retention	FALSE	canonical	3	206	junction_4	16.8874953737966	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTCTCCACTTGTCC	NA	False	NA	16	True	AATAAA	-18	NA	115769971	115785216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781759_115783691
ES.26876.6	chr5	+	1647	6	NNC	ENSMUSG00000029518.16	novel	2820	6	NA	NA	5	-1135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.6327638822834	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGGCTGGGGAGC	NA	False	NA	NA	False	NA	NA	NA	115769971	115783043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115782107
ES.26876.7	chr5	+	4157	5	ISM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	14	582	14	-582	intron_retention	FALSE	canonical	3	216	junction_4	13.1410616009514	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCTGTCTCTCCACTTG	NA	False	NA	13	True	AATAAA	-15	NA	115769980	115785213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633
ES.26876.9	chr5	+	1951	5	ISM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	5807	579	5574	-579	3prime_fragment	FALSE	canonical	3	206	junction_4	18.3762754659371	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTCTCCACTTGTCC	NA	False	NA	16	True	AATAAA	-18	NA	115775773	115785216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ES.26877.1	chr5	-	1418	1	FSM	ENSMUSG00000107121.2	ENSMUST00000201728.2	768	1	-644	-6	-644	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAGTTTTCCTTTAAA	NA	False	NA	NA	False	AATACA	-23	NA	115770519	115769101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115769100_115770500
ES.26878.1	chr5	+	159	1	Intergenic	novelGene_22402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	115791459	115791618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115791500_115791600
ES.26879.1	chr5	+	177	1	Intergenic	novelGene_22403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAAAAAGAATTTGG	NA	False	NA	NA	False	NA	NA	NA	115802311	115802488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115802300_115802500
ES.2688.1	chr10	+	1827	1	Intergenic	novelGene_2048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACAAATCTTGATCTC	NA	False	NA	NA	False	NA	NA	NA	42347807	42349634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42347800_42349600
ES.2688.2	chr10	+	1825	1	Intergenic	novelGene_2049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACGCACAAAA	NA	False	NA	NA	False	NA	NA	NA	42349497	42351322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42349500_42351300
ES.26880.1	chr5	+	170	1	Intergenic	novelGene_22404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAATCG	NA	False	NA	NA	False	NA	NA	NA	115802506	115802676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115802500_115802700
ES.26881.1	chr5	+	182	1	Intergenic	novelGene_22406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATTTTATTAGG	NA	False	NA	NA	False	NA	NA	NA	115836738	115836920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115836700_115836900
ES.26882.1	chr5	-	4101	10	NIC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-930	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	7.26907877057606	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCTCAGTTCCTGGG	NA	False	NA	0	True	AATAAA	-17	NA	115870610	115786232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115787629_115789877_115789999_115793959_115794091_115799433_115799578_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
ES.26882.10	chr5	-	5183	1	Intergenic	novelGene_22405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGTGCCATGTATGA	NA	False	NA	NA	False	NA	NA	NA	115839279	115834096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115834100_115839300
ES.26882.11	chr5	-	4588	2	FSM	ENSMUSG00000041609.17	ENSMUST00000148840.2	600	2	-859	-3129	-666	3129	multi-exon	FALSE	canonical	3	22	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTATTTTGTATGTACAC	NA	False	NA	NA	False	NA	NA	NA	115870346	115859393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115862816_115869180
ES.26882.2	chr5	-	3821	2	NIC	ENSMUSG00000041609.17	novel	1568	3	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCTCAGTTCCTGGG	NA	False	NA	0	True	AATAAA	-17	NA	115791038	115786232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115789999_115790983
ES.26882.4	chr5	-	3527	10	NNC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-696	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.56201332175563	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	115870376	115786234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180_115869671_115869864
ES.26882.5	chr5	-	1594	3	FSM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	-22	-4	-17	-1	multi-exon	FALSE	canonical	0	0	junction_2	16.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	115791062	115786234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115787629_115789877_115789999_115790983
ES.26882.6	chr5	-	3643	11	NNC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-607	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	9.80255068846879	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGCCTCAGTTCCTG	NA	False	NA	-2	True	AATAAA	-15	NA	115870287	115786234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115787629_115789877_115789999_115793959_115794091_115799433_115799578_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180_115869704_115869836
ES.26882.7	chr5	-	3625	10	NNC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-900	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.56201332175563	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTGCCTCAGTTCC	NA	False	NA	-4	True	AATAAA	-13	NA	115870580	115786236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180_115870037_115870334
ES.26882.8	chr5	-	3664	10	NNC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-826	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.56201332175563	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTGCCTCAGTTCC	NA	False	NA	-4	True	AATAAA	-13	NA	115870506	115786236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180_115869628_115869812
ES.26882.9	chr5	-	1947	1	NIC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	5229	-2883	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAAGAAGATGTACTAAC	NA	False	NA	NA	False	NA	NA	NA	115803094	115801147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_115801100_115803100
ES.26883.1	chr5	-	411	1	Intergenic	novelGene_22407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGACAGGGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	115904554	115904143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115904100_115904600
ES.26883.2	chr5	-	204	1	Intergenic	novelGene_22408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTGTCTGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	115904555	115904351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_115904400_115904600
ES.26884.1	chr5	+	176	1	Intergenic	novelGene_22409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTTATTTAAGT	5752	False	NA	NA	False	NA	NA	NA	115914466	115914642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115914500_115914600
ES.26885.1	chr5	-	652	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	-51	-118	-51	118	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	115940269	115939617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_115939600_115940300
ES.26886.1	chr5	+	160	1	Intergenic	novelGene_22410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAAATCTTAA	1005	False	NA	NA	False	NA	NA	NA	115946329	115946489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115946300_115946500
ES.26887.1	chr5	+	181	1	Intergenic	novelGene_22411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	115972325	115972506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_115972300_115972500
ES.26888.1	chr5	+	6569	46	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	-39	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	9.24871696140058	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8442	False	NA	NA	False	AATAAA	-17	NA	115983297	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072635_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.10	chr5	+	6585	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	7.94953217041073	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTTTTATTG	8485	False	NA	NA	False	AATAAA	-15	NA	115983340	116136556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.11	chr5	+	6676	46	NIC	ENSMUSG00000029516.20	novel	6213	47	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	9.55359152942552	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8486	False	NA	NA	False	AATAAA	-16	NA	115983341	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.12	chr5	+	6704	47	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	11.0469867757772	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8486	False	NA	NA	False	AATAAA	-17	NA	115983341	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.13	chr5	+	6612	46	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	9.04185056989967	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8487	False	NA	NA	False	AATAAA	-17	NA	115983342	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.14	chr5	+	994	6	NNC	ENSMUSG00000029516.20	novel	651	6	NA	NA	3	4201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	21.4382835133786	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATAAATGTAACTTTG	8487	False	NA	NA	False	NA	NA	NA	115983342	116005286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116004913
ES.26888.15	chr5	+	2100	11	FSM	ENSMUSG00000029516.20	ENSMUST00000147330.8	1671	11	6	-435	3	428	multi-exon	FALSE	canonical	3	12	junction_1	12.568213874692	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACAGGTGACTCCCGA	8487	False	NA	NA	False	NA	NA	NA	115983342	116064196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
ES.26888.16	chr5	+	6629	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	8.73805357313135	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8488	False	NA	NA	False	AATAAA	-16	NA	115983343	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.17	chr5	+	6631	46	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	9.69342401506312	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTTTTATTG	8488	False	NA	NA	False	AATAAA	-15	NA	115983343	116136556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983383_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.18	chr5	+	7328	46	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	10.7880592426174	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8489	False	NA	NA	False	AATAAA	-17	NA	115983344	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116064351_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109307_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.19	chr5	+	6541	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	6	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	8.01554046143421	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8490	False	NA	NA	False	AATAAA	-17	NA	115983345	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.2	chr5	+	6779	45	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	-35	0	intron_retention	FALSE	canonical	3	7	junction_25	9.37179697349429	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8446	False	NA	NA	False	AATAAA	-16	NA	115983301	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550
ES.26888.20	chr5	+	6882	48	NNC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	23	585	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_46	10.7193930356604	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATATTTTGCCTGCAT	8507	False	NA	NA	False	TTTAAA	-15	NA	115983362	116137142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983383_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116136695_116136752_116136852_116137019
ES.26888.21	chr5	+	6549	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	-24	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_36	9.20504424248862	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	9550	False	NA	NA	False	AATAAA	-17	NA	115984405	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.22	chr5	+	6586	46	NNC	ENSMUSG00000029516.20	novel	6213	47	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	11.2017635295894	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	9550	False	NA	NA	False	AATAAA	-17	NA	115984405	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124625_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.23	chr5	+	1929	1	NIC	ENSMUSG00000029516.20	novel	6794	46	NA	NA	-1432	428	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACAGGTGACTCCCGA	3424	False	NA	NA	False	NA	NA	NA	116062267	116064196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116062300_116064200
ES.26888.24	chr5	+	4728	33	NNC	ENSMUSG00000029516.20	novel	3487	26	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	8.8166546057731	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116071659	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.25	chr5	+	4740	31	NNC	ENSMUSG00000029516.20	novel	3487	26	NA	NA	-3701	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	13.7388338499145	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTCCTGTTGTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	116079654	116144927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116079823_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143843_116144151_116144363
ES.26888.26	chr5	+	4399	31	NNC	ENSMUSG00000029516.20	novel	3487	26	NA	NA	-3640	-137	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	11.9238789363566	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACTTTTGTACTTAGCT	NA	False	NA	NA	False	NA	NA	NA	116079715	116144716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116079823_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ES.26888.27	chr5	+	4372	28	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	6.95488104645726	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	116083337	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.28	chr5	+	4373	28	FSM	ENSMUSG00000029516.20	ENSMUST00000122877.8	4398	28	25	0	25	0	multi-exon	FALSE	canonical	3	9	junction_12	8.77441723450695	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116083380	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.29	chr5	+	4325	29	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	29	-44	combination_of_known_junctions	FALSE	canonical	3	8	junction_19	10.1475718418602	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCTTACTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	116083384	116136513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.3	chr5	+	1972	10	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-9	428	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.3918076496978	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACAGGTGACTCCCGA	8472	False	NA	NA	False	NA	NA	NA	115983327	116064196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116063452
ES.26888.30	chr5	+	4412	29	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_19	11.2355916803773	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	116083385	116136556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.31	chr5	+	2529	1	Intergenic	novelGene_22413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGCAAAGGC	NA	False	NA	NA	False	NA	NA	NA	116093542	116096071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116093500_116096100
ES.26888.32	chr5	+	4165	19	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	3277	0	intron_retention	FALSE	canonical	3	30	junction_12	5.93691111439669	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116109360	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.33	chr5	+	2253	1	NIC	ENSMUSG00000029516.20	novel	6794	46	NA	NA	5784	-14729	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTCTTACCAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	116111867	116114120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116111900_116114100
ES.26888.34	chr5	+	2938	19	NIC	ENSMUSG00000029516.20	novel	3487	26	NA	NA	-7821	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	10.3185377947761	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116117411	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116125746_116125792_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.35	chr5	+	1191	5	NNC	ENSMUSG00000029516.20	novel	3487	26	NA	NA	6875	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.0642169465815	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTTCTTACTTTTT	8494	False	NA	NA	False	ATTAAA	-18	NA	116132107	116136510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116132156_116132270_116132400_116133451_116133533_116135474_116135630_116135732
ES.26888.4	chr5	+	2156	11	NIC	ENSMUSG00000029516.20	novel	2335	10	NA	NA	-9	428	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.3971770980332	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAACAGGTGACTCCCGA	8472	False	NA	NA	False	NA	NA	NA	115983327	116064196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452
ES.26888.5	chr5	+	6618	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	8.32263016356645	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8477	False	NA	NA	False	AATAAA	-16	NA	115983332	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.6	chr5	+	6684	46	NNC	ENSMUSG00000029516.20	novel	6213	47	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	10.0906997885291	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8483	False	NA	NA	False	AATAAA	-16	NA	115983338	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116106995_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.7	chr5	+	6609	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	8.69993614280524	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8484	False	NA	NA	False	AATAAA	-16	NA	115983339	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983383_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.8	chr5	+	6569	46	NIC	ENSMUSG00000029516.20	novel	6213	47	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	8.52708104283706	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8484	False	NA	NA	False	AATAAA	-16	NA	115983339	116136557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119708_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26888.9	chr5	+	6674	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	8.67845352326989	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGTTTTATTGAG	8485	False	NA	NA	False	AATAAA	-17	NA	115983340	116136558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_115983361_115984342_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071715_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
ES.26889.1	chr5	-	182	1	Intergenic	novelGene_22412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGCATTTTGAAA	995	False	NA	NA	False	NA	NA	NA	116023487	116023305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116023300_116023500
ES.2689.1	chr10	-	2244	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	66	-1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	11.696577164084	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42354345	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42354258
ES.2689.10	chr10	-	1548	7	NNC	ENSMUSG00000038302.15	novel	1952	11	NA	NA	1	-100650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1965332686776	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTGCGAGAAA	NA	False	NA	NA	False	NA	NA	NA	42354410	42290227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42291015_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ES.2689.11	chr10	-	1236	4	NNC	ENSMUSG00000038302.15	novel	1952	11	NA	NA	9321	-100662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.05480466765633	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42344955	42290239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42291015_42291544_42291645_42330302_42330527_42344818
ES.2689.2	chr10	-	4573	12	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	67	-1	intron_retention	FALSE	canonical	3	47	junction_10	8.03813226116204	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42354494	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42189613_42192345_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ES.2689.3	chr10	-	2076	10	NIC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	19.882991056009	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42354410	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42330302_42330527_42354258
ES.2689.4	chr10	-	4664	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_4	25.2544080106215	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42354433	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42189613_42192345_42194729_42215820_42215922_42216177_42216249_42272137_42272373_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ES.2689.5	chr10	-	2335	12	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3168	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	18.3127106650224	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42351108	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42330302_42330527_42350930
ES.2689.6	chr10	-	2384	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	128	1	-22	-1	multi-exon	FALSE	canonical	3	47	junction_11	7.72801541291309	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	False	NA	0	True	AATAAA	-17	NA	42354433	42188581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ES.2689.7	chr10	-	2522	13	NNC	ENSMUSG00000038302.15	novel	2552	14	NA	NA	3199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.0020101275862	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGAGCTTGTCTGATTC	NA	False	NA	-2	True	AATAAA	-15	NA	42351077	42188583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42350762
ES.2689.8	chr10	-	2403	13	NNC	ENSMUSG00000038302.15	novel	2513	13	NA	NA	3148	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	15.7524248574272	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTGAGCTTGTCTGAT	NA	False	NA	-4	True	AATAAA	-13	NA	42351128	42188585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42350930
ES.2689.9	chr10	-	2354	11	NNC	ENSMUSG00000038302.15	novel	1952	11	NA	NA	64	-17005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.5672069080855	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	42354497	42206582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42207775_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ES.26890.1	chr5	-	1561	1	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAACCCCACATCAGTCA	NA	False	NA	NA	False	NA	NA	NA	116025484	116023923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116023900_116025500
ES.26891.1	chr5	-	3360	20	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAGTTGCAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	116120170	116065093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116066013_116071454_116071715_116071877_116071929_116072635_116072690_116074785_116074927_116076735_116076861_116079892_116079990_116083841_116083960_116084887_116084996_116085962_116086139_116090508_116090708_116099201_116099255_116105944_116106143_116106992_116107213_116109297_116109436_116111784_116111890_116117411_116117553_116117818_116117927_116119751_116119870_116120139
ES.26891.3	chr5	-	5831	19	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAGTTGCAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	116120935	116065093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116066013_116071454_116071626_116071877_116071929_116072635_116072690_116074785_116074927_116076735_116076861_116079892_116079985_116083838_116083960_116084887_116084996_116085962_116086139_116090508_116090708_116099201_116099255_116105944_116106145_116107022_116107213_116109297_116109436_116111784_116111890_116117411_116117553_116117818_116119870_116120139
ES.26891.4	chr5	-	3241	20	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAGTTGCAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	116120170	116065093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116066013_116071454_116071626_116071877_116071929_116072635_116072690_116074785_116074927_116076735_116076861_116079892_116079985_116083838_116083960_116084887_116084996_116085962_116086139_116090508_116090708_116099201_116099255_116105944_116106145_116107022_116107213_116109297_116109436_116111784_116111890_116117411_116117553_116117818_116117927_116119751_116119870_116120139
ES.26891.5	chr5	-	3920	1	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAATTTCTTCTATTGGT	5710	False	NA	NA	False	NA	NA	NA	116077583	116073663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116073700_116077600
ES.26892.1	chr5	-	2588	2	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGCTTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	116146293	116143492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116144149_116144361
ES.26892.2	chr5	-	2764	1	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116146287	116143523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116143500_116146300
ES.26892.3	chr5	-	1452	1	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAGGGGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116146298	116144846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116144800_116146300
ES.26892.4	chr5	-	1167	2	Antisense	novelGene_ENSMUSG00000029516.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-35	NA	116146293	116144892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_116145696_116145929
ES.26893.1	chr5	+	237	1	ISM	ENSMUSG00000029516.20	ENSMUST00000051704.15	9514	47	163035	32	21505	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	116146737	116146974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_116146700_116147000
ES.26894.1	chr5	-	4697	7	NNC	ENSMUSG00000029513.15	novel	794	7	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	98.9657628789988	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCGGCACATTTT	NA	False	NA	0	True	AATAAA	-25	NA	116162497	116151644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116152786_116152972_116153356_116153468_116156141_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.10	chr5	-	2092	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	-9	6	-9	-2	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTTTTGACTCGGCA	NA	False	NA	-6	True	AATAAA	-19	NA	116162530	116151650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
ES.26894.11	chr5	-	5787	4	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	6	10	3	-6	intron_retention	FALSE	canonical	3	214	junction_3	10.8730042868667	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGTAACTTTTGACTC	NA	False	NA	-10	True	AATAAA	-15	NA	116162515	116151654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062
ES.26894.13	chr5	-	5440	5	NIC	ENSMUSG00000029513.15	novel	2089	7	NA	NA	892	-13	intron_retention	FALSE	canonical	3	217	junction_4	8.78919791562347	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACTGGAGTAACTT	NA	False	NA	-17	True	AATAAA	-8	NA	116161523	116151661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_116152786_116152972_116153042_116156006_116158178_116158432_116158527_116159541
ES.26894.15	chr5	-	1778	7	NNC	ENSMUSG00000029513.15	novel	794	7	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.729625314687	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACTGGAGTAACTT	NA	False	NA	-17	True	AATAAA	-8	NA	116162451	116151661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116152786_116152972_116153042_116156006_116156141_116158432_116158523_116159541_116159706_116162149_116162319_116162423
ES.26894.16	chr5	-	1871	7	FSM	ENSMUSG00000029513.15	ENSMUST00000148208.2	794	7	-30	-1047	-19	-13	multi-exon	FALSE	canonical	2	5	junction_3	82.0135490161365	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACTGGAGTAACTT	NA	False	NA	-17	True	AATAAA	-8	NA	116162540	116151661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.2	chr5	-	1983	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	45	-2	-1	2	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGACTCGGCACATT	NA	False	NA	-2	True	AATAAA	-23	NA	116162522	116151646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.3	chr5	-	2154	9	NNC	ENSMUSG00000029513.15	novel	2026	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.6989861204485	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGACTCGGCACATT	NA	False	NA	-2	True	AATAAA	-23	NA	116162510	116151646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116152786_116152972_116153042_116154003_116154187_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.4	chr5	-	4531	6	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	0	2	0	2	intron_retention	FALSE	canonical	3	214	junction_3	9.76933979345585	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGACTCGGCACATT	NA	False	NA	-2	True	AATAAA	-23	NA	116162521	116151646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541
ES.26894.5	chr5	-	4128	6	NIC	ENSMUSG00000029513.15	novel	794	7	NA	NA	20	2	intron_retention	FALSE	canonical	3	151	junction_5	31.6037972402052	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGACTCGGCACATT	NA	False	NA	-2	True	AATAAA	-23	NA	116162490	116151646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_116152786_116152972_116153042_116156006_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.6	chr5	-	1918	8	NNC	ENSMUSG00000029513.15	novel	2026	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.1046839346961	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGACTCGGCACATT	NA	False	NA	-2	True	AATAAA	-23	NA	116162509	116151646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159593_116159706_116162149_116162319_116162423
ES.26894.7	chr5	-	1866	7	NIC	ENSMUSG00000029513.15	novel	2026	8	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	81.9805193662223	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGACTCGGCACAT	NA	False	NA	-3	True	AATAAA	-22	NA	116162540	116151647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_116152786_116152972_116153042_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ES.26894.8	chr5	-	9448	4	NNC	ENSMUSG00000029513.15	novel	670	3	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_1	103.737917636492	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGACTCGGCACAT	NA	False	NA	-3	True	AATAAA	-22	NA	116162509	116151647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116153325_116153468_116158178_116158432_116158527_116159541
ES.26895.1	chr5	-	350	1	Intergenic	novelGene_22414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAGAGTGATTCCCTG	NA	False	NA	NA	False	NA	NA	NA	116165661	116165311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116165300_116165700
ES.26895.2	chr5	-	155	1	Intergenic	novelGene_22415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116165662	116165507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116165500_116165700
ES.26896.1	chr5	-	197	1	Intergenic	novelGene_22416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	116180958	116180761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116180800_116181000
ES.26897.1	chr5	-	165	1	Intergenic	novelGene_22417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116190748	116190583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116190600_116190700
ES.26898.1	chr5	+	1092	2	FSM	ENSMUSG00000086655.2	ENSMUST00000127792.2	1599	2	1	506	1	-506	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTCTTTTAAGACTTA	NA	False	NA	NA	False	NA	NA	NA	116261673	116266663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116261887_116265784
ES.26899.1	chr5	+	167	1	Intergenic	novelGene_22420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAGTAGTAGTAGTA	NA	False	NA	NA	False	NA	NA	NA	116372384	116372551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116372400_116372600
ES.269.1	chr1	+	174	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	4859	False	NA	NA	False	NA	NA	NA	36313133	36313307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36313100_36313300
ES.2690.1	chr10	+	1482	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	-76	-5	-75	5	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCTGGTTGCACGGC	NA	False	NA	17	True	AATAAA	-18	NA	42377950	42411371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ES.2690.10	chr10	+	8157	1	NIC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	24922	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCCTGTGTGCTCTGGTT	NA	False	NA	10	True	AATAAA	-11	NA	42403207	42411364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42403200_42411400
ES.2690.11	chr10	+	3999	2	ISM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	27702	12	27702	-1	3prime_fragment	FALSE	canonical	3	2006	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42405987	42411365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42409270_42410648
ES.2690.2	chr10	+	1323	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	1054.41579401423	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42378048	42411365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42378489_42401949_42402046_42409144_42409270_42410703
ES.2690.3	chr10	+	1030	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	58	313	58	270	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAGTTTCTGTGTCAT	NA	False	NA	18	True	ACTAAA	-18	NA	42378084	42411053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ES.2690.4	chr10	+	1227	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	-65	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	983.423950626924	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42378220	42411365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42378489_42401928_42402046_42409144_42409270_42410648
ES.2690.6	chr10	+	1106	3	FSM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	-61	12	-61	-1	multi-exon	FALSE	canonical	3	200	junction_1	903	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42378224	42411365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42378489_42409144_42409270_42410648
ES.2690.7	chr10	+	2548	3	ISM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	232	0	-27	0	intron_retention	FALSE	canonical	3	2158	junction_2	96.5	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378258	42411366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42378489_42401949_42402046_42409144
ES.2690.8	chr10	+	158	1	Intergenic	novelGene_2050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAATAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	42383713	42383871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42383700_42383900
ES.2690.9	chr10	+	1104	3	ISM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	23757	1	23498	-1	3prime_fragment	FALSE	canonical	3	2006	junction_2	76	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTGTGCTCTGGTTG	NA	False	NA	11	True	AATAAA	-12	NA	42401783	42411365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42402046_42409144_42409270_42410648
ES.26900.1	chr5	-	3493	1	NIC	ENSMUSG00000043913.15	novel	3522	14	NA	NA	159696	-1134	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCCAAGGAAGAATTCAAG	NA	False	NA	NA	False	AATAAA	-23	NA	116267326	116263833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_116263800_116267300
ES.26900.2	chr5	-	2389	14	NNC	ENSMUSG00000043913.15	novel	3522	14	NA	NA	-9	-1139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.73716766009788	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTTCCCAAGGAAGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	116427053	116263838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116264237_116269082_116269273_116272086_116272219_116274388_116274512_116275090_116275154_116278837_116278910_116284180_116284266_116295542_116295763_116301541_116301633_116310500_116310609_116318862_116318971_116328118_116328290_116363327_116363408_116426505
ES.26900.3	chr5	-	1271	3	NNC	ENSMUSG00000043913.15	novel	3522	14	NA	NA	141703	-20557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTGTTGGAAGAGACA	3685	False	NA	NA	False	NA	NA	NA	116285319	116283256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116284266_116284347_116284451_116285160
ES.26900.4	chr5	-	3281	1	Intergenic	novelGene_22418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTGAGAAAAGGAACGAAA	NA	False	NA	NA	False	NA	NA	NA	116299921	116296640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116296600_116299900
ES.26900.5	chr5	-	164	1	Intergenic	novelGene_22419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCCTAGCTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	116346271	116346107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116346100_116346300
ES.26900.6	chr5	-	1059	1	Intergenic	novelGene_22421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACCTG	7203	False	NA	NA	False	NA	NA	NA	116385566	116384507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116384500_116385600
ES.26900.7	chr5	-	151	1	Intergenic	novelGene_22422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116425220	116425069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116425100_116425200
ES.26901.1	chr5	+	203	1	Intergenic	novelGene_22423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGCCGA	NA	False	NA	NA	False	NA	NA	NA	116435006	116435209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116435000_116435200
ES.26902.1	chr5	-	1250	2	FSM	ENSMUSG00000084921.2	ENSMUST00000132130.2	531	2	-29	-690	-29	690	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGAGTTGCCTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	116447448	116443050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116444251_116447398
ES.26903.1	chr5	-	2326	1	Intergenic	novelGene_22424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTTGTGGGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	116525775	116523449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116523400_116525800
ES.26904.1	chr5	+	183	1	Intergenic	novelGene_22425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATGTTATAAAATGC	NA	False	NA	NA	False	NA	NA	NA	116531021	116531204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116531000_116531200
ES.26905.1	chr5	+	504	3	Intergenic	novelGene_22426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGAATGTCAATGTGTA	NA	False	NA	NA	False	NA	NA	NA	116533070	116539425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116533103_116534504_116534613_116539061
ES.26905.2	chr5	+	3744	2	Intergenic	novelGene_22427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACCAAACTCAGACAT	NA	False	NA	NA	False	NA	NA	NA	116533533	116541263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116535326_116539311
ES.26905.3	chr5	+	4109	1	Intergenic	novelGene_22428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGGGACTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	116538887	116542996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116538900_116543000
ES.26906.1	chr5	+	1933	5	Antisense	novelGene_ENSMUSG00000041548.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTGGTATTAGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	116548698	116556989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_116548852_116549042_116549115_116549506_116549593_116554427_116554603_116555542
ES.26906.2	chr5	+	880	4	Antisense	novelGene_ENSMUSG00000041548.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTTTGTAACAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	116551066	116555956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_116551137_116551342_116551564_116554427_116554603_116555542
ES.26906.3	chr5	+	4068	1	Antisense	novelGene_ENSMUSG00000041548.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGTGTGAGGTAATTTT	NA	False	NA	NA	False	NA	NA	NA	116551908	116555976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_116551900_116556000
ES.26906.4	chr5	+	3416	2	Antisense	novelGene_ENSMUSG00000041548.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCAATGCTTTGTAACAA	NA	False	NA	NA	False	NA	NA	NA	116552493	116555951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_116554145_116554186
ES.26907.1	chr5	+	4227	1	Antisense	novelGene_ENSMUSG00000041548.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACTCCCGACTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	116559823	116564050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_116559800_116564000
ES.26908.1	chr5	-	1951	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-134	-1	-134	1	multi-exon	FALSE	canonical	3	315	junction_2	24.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGCTTCATTTAGCGAG	NA	False	NA	1	True	AATAAA	-21	NA	116561057	116546548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116547550_116553465_116553530_116560171
ES.26908.2	chr5	-	1717	4	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	160.819429450825	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTGCTTCATTTAGC	NA	False	NA	-2	True	AATAAA	-18	NA	116560923	116546551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116547550_116553465_116553530_116560171_116560498_116560594
ES.26908.3	chr5	-	1225	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	5493	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGCTTCATTTA	NA	False	NA	-4	True	AATAAA	-16	NA	116548458	116546553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116547550_116548229
ES.26908.4	chr5	-	1572	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGCTTCATTTA	NA	False	NA	-4	True	AATAAA	-16	NA	116560925	116546553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_116547471_116560270
ES.26908.5	chr5	-	1185	3	FSM	ENSMUSG00000041548.5	ENSMUST00000133335.2	749	3	9	-445	9	-4	multi-exon	FALSE	canonical	2	8	junction_2	178	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGCTTCATTTA	NA	False	NA	-4	True	AATAAA	-16	NA	116553942	116546553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116547550_116553465_116553530_116553817
ES.26908.7	chr5	-	3574	2	Genic_Genomic	ENSMUSG00000041548.5	novel	1816	3	NA	NA	486	-9817	multi-exon	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTATATAATAAAG	NA	False	NA	NA	False	CATAAA	-37	NA	116560437	116556815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_116559348_116559395
ES.26909.1	chr5	+	3322	2	NNC	ENSMUSG00000086219.8	novel	562	3	NA	NA	-3174	-23152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTGTGTGTCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	116573604	116577005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116573947_116574025
ES.26909.10	chr5	+	5025	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	4	1608	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGTCAAAGGCCTCTT	NA	False	NA	NA	False	TATAAA	-15	NA	116576782	116605154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
ES.26909.11	chr5	+	3394	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	4	-23	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATACTCTCTTATACTTC	NA	False	NA	NA	False	NA	NA	NA	116576782	116603523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
ES.26909.12	chr5	+	3380	5	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	4	-109	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	162.592089290961	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGTGTGTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	116576782	116603437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116593800_116593934_116599782_116599863_116600453
ES.26909.13	chr5	+	3226	5	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	4	-282	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	155.365697629818	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTACTAGTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	116576782	116603264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116587819_116587911_116599782_116599924_116600453
ES.26909.14	chr5	+	7827	2	ISM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	4	15018	4	-15018	5prime_fragment	FALSE	canonical	3	389	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCAAGAATTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	116576782	116585139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_116576898_116577427
ES.26909.15	chr5	+	3167	5	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	5	-279	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	164.038676841774	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTAGTTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	116576783	116603267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116587819_116587911_116599782_116599863_116600453
ES.26909.16	chr5	+	507	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	5	480	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTGTTGTTGTTTT	NA	False	NA	10	True	NA	NA	NA	116576783	116600637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
ES.26909.17	chr5	+	548	3	FSM	ENSMUSG00000086219.8	ENSMUST00000133548.5	562	3	9	5	9	-5	multi-exon	FALSE	canonical	3	381	junction_2	4	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAATTTCATTCCGTT	NA	False	NA	NA	False	NA	NA	NA	116576787	116600152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116576898_116577427_116577496_116599782
ES.26909.18	chr5	+	164	1	Intergenic	novelGene_22429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	116590965	116591129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_116591000_116591100
ES.26909.19	chr5	+	269	2	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	23686	13315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAAGAGTCTGGATCAT	NA	False	NA	NA	False	ATTAAA	-30	NA	116600464	116616861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116600539_116616666
ES.26909.2	chr5	+	3200	1	Genic_Genomic	ENSMUSG00000086219.8	novel	NA	NA	NA	NA	-2982	-23161	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGATGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	116573796	116576996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_116573800_116577000
ES.26909.20	chr5	+	3865	1	Genic_Genomic	ENSMUSG00000086219.8	novel	NA	NA	NA	NA	26389	3486	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTCTGCTTCCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	116603167	116607032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_116603200_116607000
ES.26909.3	chr5	+	2984	2	NNC	ENSMUSG00000086219.8	novel	562	3	NA	NA	-2918	-23161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGATGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	116573860	116576996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116574052_116574203
ES.26909.5	chr5	+	462	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	-11	2909	-11	480	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTGTTGTTGTTTT	NA	False	NA	10	True	NA	NA	NA	116576767	116600637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ES.26909.6	chr5	+	3154	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	-9	-276	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTAGTTGTCTTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	116576769	116603270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
ES.26909.7	chr5	+	2945	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	-3	418	-3	-418	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTTCTGATAATGACT	NA	False	NA	NA	False	NA	NA	NA	116576775	116603128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ES.26909.8	chr5	+	1352	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	1320	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTCTCCTTTCATGT	NA	False	NA	NA	False	NA	NA	NA	116576778	116601477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
ES.26909.9	chr5	+	3078	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	3	279	3	-279	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTAGTTGTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	116576781	116603267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ES.2691.1	chr10	-	1078	2	Antisense	novelGene_ENSMUSG00000038280.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATTATCTCAGCTC	NA	False	NA	NA	False	ATTAAA	-31	NA	42521691	42512503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_42513429_42521538
ES.2691.2	chr10	-	1001	2	Antisense	novelGene_ENSMUSG00000038280.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATTATCTCAGCTC	NA	False	NA	NA	False	ATTAAA	-31	NA	42515983	42512503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_42513429_42515907
ES.2691.3	chr10	-	231	1	Intergenic	novelGene_2051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCAATTCCCAACA	NA	False	NA	NA	False	NA	NA	NA	42515616	42515385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_42515400_42515600
ES.26910.1	chr5	-	5753	2	FSM	ENSMUSG00000063919.12	ENSMUST00000139425.2	2798	2	205	-3160	205	3	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGAGAGAATCCTTTT	7163	False	NA	NA	False	ATTAAA	-16	NA	116584698	116577330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_116582934_116584548
ES.26911.1	chr5	-	502	1	Intergenic	novelGene_22430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCTGCATCCCTGAAA	NA	False	NA	NA	False	NA	NA	NA	116696919	116696417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_116696400_116696900
ES.26912.1	chr5	+	1202	1	Intergenic	novelGene_22431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGTCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	117183617	117184819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117183600_117184800
ES.26913.1	chr5	-	214	1	Intergenic	novelGene_22432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGCAATAAGACAGGGCT	NA	False	NA	NA	False	NA	NA	NA	117205016	117204802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117204800_117205000
ES.26914.1	chr5	-	178	1	Intergenic	novelGene_22433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	117211553	117211375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117211400_117211600
ES.26915.1	chr5	+	177	1	Intergenic	novelGene_22434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGTGATTTCCAA	7441	False	NA	NA	False	NA	NA	NA	117248353	117248530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117248400_117248500
ES.26916.1	chr5	-	3085	11	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	81	741	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGATTGGAGAGAGTG	NA	False	NA	NA	False	AGTAAA	-16	NA	117253982	117229003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.10	chr5	-	8173	4	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	1468	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	288.833285247159	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117246459	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117237604_117238664_117238761_117243219_117243389_117246408
ES.26916.11	chr5	-	2329	11	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	74	-2	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117253989	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.12	chr5	-	4651	9	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	213.065130887248	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254062	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.13	chr5	-	2550	10	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-19	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	266.551271328639	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254197	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236457_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.15	chr5	-	6340	9	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	21	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	276.778538501452	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254042	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874
ES.26916.16	chr5	-	3448	9	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	53	-2	intron_retention	FALSE	canonical	0	0	junction_5	213.065130887248	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254010	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.17	chr5	-	2254	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	69	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	277.697695345136	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117253994	117229747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236457_117237541_117237604_117238664_117238761_117243219_117243377_117246395_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.19	chr5	-	4169	2	ISM	ENSMUSG00000066900.12	ENSMUST00000202713.2	9778	3	6672	-2	1082	2	3prime_fragment	FALSE	canonical	3	651	junction_1	0	411	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117235794	117229747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_117231097_117232974
ES.26916.2	chr5	-	2555	11	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-12	3	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGGTCTGTTTCTTC	NA	False	NA	-1	True	GATAAA	-21	NA	117254190	117229741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.21	chr5	-	5025	7	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	60	2	intron_retention	FALSE	canonical	3	13	junction_5	238.618535649592	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117247867	117229747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117245330_117246412_117246485_117247822
ES.26916.22	chr5	-	3397	11	NIC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	14	2	intron_retention	FALSE	canonical	3	113	junction_1	158.158654521338	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCCACGTGGTCTGT	NA	False	NA	-7	True	GATAAA	-15	NA	117254049	117229747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.24	chr5	-	2483	12	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_7	240.509239354491	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTGCCACGTGGTCT	NA	False	NA	-9	True	GATAAA	-13	NA	117254058	117229749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.25	chr5	-	5323	9	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-28	0	intron_retention	FALSE	canonical	3	595	junction_3	33.9850610562935	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTGCCACGTGGTCT	NA	False	NA	-9	True	GATAAA	-13	NA	117254206	117229749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.26	chr5	-	2276	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	277.697695345136	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTAAGTTGCCACGTG	NA	False	NA	-13	True	GATAAA	-9	NA	117254019	117229753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236457_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.27	chr5	-	2876	9	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-8	7	intron_retention	FALSE	canonical	0	0	junction_5	213.065130887248	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTTCTACTCCAATG	NA	False	NA	-16	True	AATAAA	-22	NA	117254186	117230494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.28	chr5	-	1813	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-28	2	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGGGCTTCTACTC	NA	False	NA	-21	True	AATAAA	-17	NA	117254206	117230499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.29	chr5	-	2827	10	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_2	294.13300090643	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254065	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233070_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.3	chr5	-	3497	10	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	9	3	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGGTCTGTTTCTTC	NA	False	NA	-1	True	GATAAA	-21	NA	117254054	117229741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.30	chr5	-	1528	12	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	45	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	224.431513233395	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254018	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236457_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.32	chr5	-	1645	10	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	17	1	intron_retention	FALSE	non_canonical	0	0	junction_3	266.551271328639	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254046	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236457_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.33	chr5	-	2679	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	47	1	intron_retention	FALSE	non_canonical	0	0	junction_6	275.576196359555	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254016	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.34	chr5	-	1780	10	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	43	1	intron_retention	FALSE	canonical	0	0	junction_6	200.893559434399	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254020	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.35	chr5	-	3299	11	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	52	1	intron_retention	FALSE	canonical	3	565	junction_3	38.7408053607562	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTTGGGCTTCTACT	NA	False	NA	-22	True	AATAAA	-16	NA	117254011	117230500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.36	chr5	-	5798	9	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_5	276.43079491077	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254051	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117250945_117253736
ES.26916.39	chr5	-	5719	8	NIC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	43	0	intron_retention	FALSE	canonical	3	595	junction_3	33.73607044366	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254020	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.4	chr5	-	3733	10	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-46	1	intron_retention	FALSE	non_canonical	0	0	junction_5	263.883812816676	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCACGTGGTCTGTTTCT	NA	False	NA	-3	True	GATAAA	-19	NA	117254224	117229743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.40	chr5	-	1593	12	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	222.75524870684	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254077	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.41	chr5	-	2613	10	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_6	244.676859208424	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254019	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.43	chr5	-	2569	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-3753	0	intron_retention	FALSE	canonical	0	0	junction_7	252.734168643656	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117257931	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117251069_117256827
ES.26916.44	chr5	-	1600	10	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	59	0	intron_retention	FALSE	non_canonical	0	0	junction_3	266.551271328639	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254004	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236450_117237536_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.46	chr5	-	1642	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	21	0	intron_retention	FALSE	non_canonical	0	0	junction_5	253.253410638435	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254042	117230501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237599_117238661_117238761_117243219_117243377_117246395_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.50	chr5	-	2799	11	NIC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	113	junction_1	158.158654521338	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGCCTTGGGCTTCTA	NA	False	NA	-24	True	AATAAA	-14	NA	117254206	117230502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.51	chr5	-	1567	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	304.289270267619	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATCTGCCTTGGGCTTCT	NA	False	NA	-25	True	AATAAA	-13	NA	117254061	117230503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236455_117237541_117237605_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.52	chr5	-	1562	13	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	83	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	255.173579266262	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATCTGCCTTGGGCTTCT	NA	False	NA	-25	True	AATAAA	-13	NA	117253980	117230503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117245241_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.56	chr5	-	4624	9	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	52	-3	intron_retention	FALSE	canonical	3	13	junction_5	208.814174267457	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATCTGCCTTGGGCTTC	NA	False	NA	-26	True	AATAAA	-12	NA	117254011	117230504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117245330_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.57	chr5	-	1577	11	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-27	-233	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTCTCTTGTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	117254205	117230734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.59	chr5	-	1267	11	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	-5	-406	intron_retention	FALSE	canonical	0	0	junction_7	190.705637043062	408	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGACTAGCTCCTTGGC	NA	False	NA	30	True	AATAGA	-14	NA	117254068	117230907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.6	chr5	-	4055	13	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	-3753	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	257.163844767408	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117257931	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243393_117246408_117246485_117247822_117247879_117250874_117250945_117253736_117254681_117256827
ES.26916.8	chr5	-	3390	10	NNC	ENSMUSG00000066900.12	novel	1694	13	NA	NA	18	-2	intron_retention	FALSE	canonical	0	0	junction_6	244.676859208424	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254045	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243393_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ES.26916.9	chr5	-	2415	11	NNC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	190.705637043062	412	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCACGTGGTCTGTT	NA	False	NA	-6	True	GATAAA	-16	NA	117254058	117229746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117246395_117246485_117247822_117247879_117250874_117250945_117253736
ES.26917.1	chr5	+	2747	13	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	-9	45981	-9	1157	5prime_fragment	FALSE	canonical	0	0	junction_10	2.69129254365919	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGTTTGTTGGTCTA	1377	False	NA	NA	False	NA	NA	NA	117258184	117367301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937
ES.26917.10	chr5	+	4677	1	NIC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	-20511	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAAG	1472	False	NA	NA	False	NA	NA	NA	117320818	117325495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117320800_117325500
ES.26917.11	chr5	+	4556	1	Intergenic	novelGene_22439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTATGTGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	117381583	117386139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117381600_117386100
ES.26917.2	chr5	+	3825	21	NNC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	1	-505	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.98789223366573	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTACAGGAACTAAT	1387	False	NA	NA	False	ATTAAA	-37	NA	117258194	117412635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117258405_117271749_117271841_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ES.26917.3	chr5	+	2944	18	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	17	10978	17	-9628	5prime_fragment	FALSE	canonical	0	0	junction_10	2.59491117648386	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAACTGAAAAAAT	1403	False	NA	NA	False	NA	NA	NA	117258210	117402304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629
ES.26917.4	chr5	+	3119	21	FSM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	20	1328	20	22	multi-exon	FALSE	canonical	0	0	junction_10	2.74727137356323	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGACCCTGCGAAACTAC	1406	False	NA	43	True	NA	NA	NA	117258213	117411954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ES.26917.5	chr5	+	7118	11	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	30	52035	30	-4897	5prime_fragment	FALSE	canonical	0	0	junction_10	2.80891438103763	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCATCCTTTGG	1416	False	NA	NA	False	NA	NA	NA	117258223	117361247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223
ES.26917.6	chr5	+	3703	20	NIC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	39	-498	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.94266542073566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGAACTAATTGTGATG	1425	False	NA	NA	False	ATTAAA	-44	NA	117258232	117412642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117258405_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ES.26917.7	chr5	+	3013	20	NIC	ENSMUSG00000061288.14	novel	4467	21	NA	NA	41	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.94266542073566	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGACCCTGCGAAACTAC	1427	False	NA	43	True	NA	NA	NA	117258234	117411954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117258405_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ES.26917.8	chr5	+	2313	8	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	78	67004	78	4930	5prime_fragment	FALSE	canonical	1	3	junction_1	2.29462548631557	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTAGGTTGTGTCATGAT	1464	False	NA	NA	False	ATTAAA	-19	NA	117258271	117346278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711
ES.26917.9	chr5	+	2015	1	Intergenic	novelGene_22435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTGCCTTGGTCATG	3533	False	NA	NA	False	NA	NA	NA	117260340	117262355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117260300_117262400
ES.26918.1	chr5	-	1893	1	Intergenic	novelGene_22436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGTTTCACAAAGACCT	NA	False	NA	NA	False	NA	NA	NA	117266666	117264773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117264800_117266700
ES.26919.1	chr5	-	2603	2	Antisense	novelGene_ENSMUSG00000061288.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	90	False	NA	NA	False	NA	NA	NA	117287516	117284781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_117287056_117287187
ES.26919.2	chr5	-	2557	2	Antisense	novelGene_ENSMUSG00000061288.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGTAAAAAAAAAAAAA	94	False	NA	NA	False	NA	NA	NA	117287512	117284823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_117286759_117286890
ES.26919.3	chr5	-	2560	2	Antisense	novelGene_ENSMUSG00000061288.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGTAAAAAAAAAAAAA	90	False	NA	NA	False	NA	NA	NA	117287516	117284823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_117286840_117286972
ES.2692.1	chr10	+	160	1	Intergenic	novelGene_2052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	42523893	42524053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42523900_42524100
ES.26920.1	chr5	-	206	1	Intergenic	novelGene_22437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATCTATGTATCTATC	NA	False	NA	NA	False	AATAAA	-34	NA	117311155	117310949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117310900_117311200
ES.26921.1	chr5	-	175	1	Intergenic	novelGene_22438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAAAACCGC	NA	False	NA	NA	False	NA	NA	NA	117374522	117374347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117374300_117374500
ES.26922.1	chr5	-	1264	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	-7	-17	-7	17	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGTGTCTGGCTTTGG	NA	False	NA	0	True	AATAAA	-32	NA	117425697	117420701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ES.26922.11	chr5	-	1356	1	NIC	ENSMUSG00000032959.13	novel	1240	4	NA	NA	3514	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	729	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCTGCGGGTATTTCC	NA	False	NA	-19	True	AATAAA	-13	NA	117422076	117420720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117420700_117422100
ES.26922.6	chr5	-	1018	5	NNC	ENSMUSG00000032959.13	novel	1240	4	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1352.16576276727	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCGGGTATTTCCTT	NA	False	NA	-17	True	AATAAA	-15	NA	117425636	117420718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117421328_117421495_117421531_117423785_117423887_117424199_117424310_117425473
ES.26922.7	chr5	-	2381	3	ISM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	23	0	-19	0	intron_retention	FALSE	canonical	0	0	junction_2	1381.5	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCGGGTATTTCCTT	NA	False	NA	-17	True	AATAAA	-15	NA	117425667	117420718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_117421531_117423785_117423887_117424199
ES.26923.1	chr5	+	4000	10	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-24625	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.129983971681	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATACATTTCTATG	NA	False	NA	-5	True	AATAAA	-11	NA	117432522	117493062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117432607_117433175_117433286_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486481_117489624_117489857_117490815
ES.26923.10	chr5	+	3873	8	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	346	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.40907074290006	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACATTTCTATGGTCTTG	NA	False	NA	1	True	AATAAA	-17	NA	117462056	117493068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117462199_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486481_117489624_117489857_117490815
ES.26923.11	chr5	+	794	1	NIC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	11250	-3359	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117472960	117473754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117473000_117473800
ES.26923.12	chr5	+	3333	2	ISM	ENSMUSG00000066894.15	ENSMUST00000139026.2	2653	3	796	8	796	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATACATTTCTATG	NA	False	NA	-5	True	AATAAA	-11	NA	117488770	117493062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117489857_117490815
ES.26923.3	chr5	+	1687	2	Antisense	novelGene_ENSMUSG00000097163.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	117451733	117454455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_117451818_117452852
ES.26923.4	chr5	+	4266	9	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9.52299847737046	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTATGGTCTTGAT	NA	False	NA	3	True	AATAAA	-19	NA	117457116	117493070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486481_117489624_117489857_117490815
ES.26923.5	chr5	+	4095	9	NIC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	-92	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	9.52299847737046	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATACATTTCTATG	NA	False	NA	-5	True	AATAAA	-11	NA	117457264	117493062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117489629_117489857_117490815
ES.26923.7	chr5	+	1266	4	ISM	ENSMUSG00000066894.15	ENSMUST00000145052.8	1691	5	-18	3582	8	-3582	5prime_fragment	FALSE	canonical	2	11	junction_3	9.10433352249844	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTTCTTATTCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	117457364	117473531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832
ES.26923.8	chr5	+	3966	9	NNC	ENSMUSG00000066894.15	novel	4236	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	11.0106482552119	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTTCTATGGTCTTGA	NA	False	NA	2	True	AATAAA	-18	NA	117457384	117493069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473108_117476271_117476527_117481790_117482079_117486359_117486471_117489620_117489857_117490815
ES.26924.1	chr5	-	1307	2	Genic_Genomic	ENSMUSG00000072688.3	novel	748	1	NA	NA	44	1181	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGCTAATCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	117457263	117455380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_117455934_117456509
ES.26925.1	chr5	+	2448	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	-27	0	-27	0	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495341	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.10	chr5	+	3376	2	FSM	ENSMUSG00000029364.16	ENSMUST00000125522.2	3357	2	9	-28	9	28	multi-exon	FALSE	canonical	3	637	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117495378	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655
ES.26925.11	chr5	+	2330	10	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.753853207196	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495378	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495422_117495502_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.12	chr5	+	2164	10	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	11	-164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.753853207196	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACTCAACATCTTA	NA	False	NA	NA	False	AATATA	-15	NA	117495380	117516502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495416_117495496_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.13	chr5	+	6699	7	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	12	-156	intron_retention	FALSE	canonical	3	578	junction_6	53.1520356043763	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACATCTTATTCTTTGG	NA	False	NA	NA	False	AATATA	-23	NA	117495381	117516510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.14	chr5	+	3491	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	16	-1086	15	1086	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCACAGAGAGCAGTA	NA	False	NA	NA	False	ATTAAA	-25	NA	117495384	117517752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.15	chr5	+	3303	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	23	-905	22	905	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGCACCCATTTAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	117495391	117517571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.18	chr5	+	3321	3	NNC	ENSMUSG00000029364.16	novel	3357	2	NA	NA	26	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	318.5	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117495395	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117502405_117502442
ES.26925.19	chr5	+	2384	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	203.014777787234	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495396	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117513998_117514561_117514673_117514755_117514864_117515454
ES.26925.2	chr5	+	2361	10	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.753853207196	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495347	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495416_117495496_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.20	chr5	+	2364	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	213.977181902651	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495397	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509272_117512191_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.22	chr5	+	2193	8	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	227.644369980181	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495401	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117513927_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.23	chr5	+	2380	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	213.00924275721	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495401	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512185_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.24	chr5	+	7383	6	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	39	0	intron_retention	FALSE	canonical	3	578	junction_5	49.114559959344	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495408	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117514673_117514755_117514864_117515454
ES.26925.25	chr5	+	2771	8	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	40	-164	intron_retention	FALSE	canonical	3	560	junction_4	46.7817337456074	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACTCAACATCTTA	NA	False	NA	NA	False	AATATA	-15	NA	117495409	117516502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514673_117514755_117514864_117515454
ES.26925.26	chr5	+	1577	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	203.014777787234	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCTCTGGTGGCGGC	NA	False	NA	3	True	AATAAA	-15	NA	117495409	117515872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117513998_117514561_117514673_117514755_117514864_117515454
ES.26925.27	chr5	+	2372	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	213.004071263908	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495409	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512271_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.3	chr5	+	3325	3	NNC	ENSMUSG00000029364.16	novel	3357	2	NA	NA	-20	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	318.5	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117495348	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495422_117495502_117495539_117501655
ES.26925.31	chr5	+	1800	10	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	41	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	201.753853207196	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAACTCAACATCTTA	NA	False	NA	NA	False	AATATA	-15	NA	117495410	117516502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454_117515790_117516204
ES.26925.32	chr5	+	2243	8	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	42	-25	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	280.878069268354	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495411	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117513833_117513998_117514561_117514673_117514755_117514864_117515454
ES.26925.33	chr5	+	3137	8	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	46	2	intron_retention	FALSE	canonical	3	560	junction_4	55.7977396952784	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCTGGTGGCGGCCA	NA	False	NA	5	True	AATAAA	-17	NA	117495415	117515874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.34	chr5	+	3891	10	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	46	8067	intron_retention	FALSE	canonical	0	0	junction_9	201.753853207196	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTAAGTGTCTGGAGGTC	NA	False	NA	NA	False	AATAAA	-11	NA	117495415	117524733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454_117515790_117522339
ES.26925.37	chr5	+	1973	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	67	381	66	-381	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGTGTGGAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	117495435	117516285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.38	chr5	+	2864	8	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	86	-25	intron_retention	FALSE	canonical	3	560	junction_4	46.7817337456074	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495455	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514673_117514755_117514864_117515454
ES.26925.39	chr5	+	6666	2	NNC	ENSMUSG00000029364.16	novel	3357	2	NA	NA	-917	28	intron_retention	FALSE	non_canonical	0	0	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117498169	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117502405_117502440
ES.26925.4	chr5	+	2289	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	-13	145	-13	-145	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGCCTTTCTTAAT	NA	False	NA	NA	False	AATATA	-34	NA	117495355	117516521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.40	chr5	+	3258	3	NNC	ENSMUSG00000029364.16	novel	585	3	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	117499006	117504843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117499115_117501655_117502405_117502442
ES.26925.41	chr5	+	3271	9	NNC	ENSMUSG00000029364.16	novel	1526	8	NA	NA	-80	901	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.673539914653	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTACTAGCACCCATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	117499006	117517567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117499126_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.42	chr5	+	2324	9	NNC	ENSMUSG00000029364.16	novel	1526	8	NA	NA	-70	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.673539914653	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117499016	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117499115_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.43	chr5	+	3950	1	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	-665	28	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117500921	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117500900_117504900
ES.26925.44	chr5	+	2540	9	NNC	ENSMUSG00000029364.16	novel	1526	8	NA	NA	-410	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.673539914653	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117501176	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117501491_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.45	chr5	+	3587	2	NNC	ENSMUSG00000029364.16	novel	3357	2	NA	NA	-340	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCGCACGTGCATGCACC	NA	False	NA	NA	False	AATAAA	-41	NA	117501246	117504871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117502405_117502442
ES.26925.46	chr5	+	2312	8	FSM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	8	-794	8	0	multi-exon	FALSE	canonical	3	560	junction_3	55.7871318641912	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117501594	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.47	chr5	+	4171	7	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	5080	-794	5080	0	3prime_fragment	FALSE	canonical	3	560	junction_2	44.6691541595913	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117506666	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.48	chr5	+	1882	6	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	-4872	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	234.982892994362	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117508844	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514755_117514864_117515454
ES.26925.49	chr5	+	1840	6	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	7564	-794	-4566	0	3prime_fragment	FALSE	canonical	3	560	junction_1	48.8122935334942	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117509150	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.50	chr5	+	2003	4	FSM	ENSMUSG00000029364.16	ENSMUST00000149669.8	600	4	-307	-1096	-307	-25	multi-exon	FALSE	canonical	3	578	junction_3	55.0413985610427	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	3163	False	NA	NA	False	NA	NA	NA	117513409	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.6	chr5	+	2319	8	NIC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	226.619522908476	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495369	117516666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.7	chr5	+	2384	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	213.977181902651	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAGAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117495370	117516641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509276_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26925.9	chr5	+	1659	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	4	758	3	36	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGAAGTACCTGCCAC	NA	False	NA	39	True	NA	NA	NA	117495372	117515908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ES.26926.1	chr5	+	2621	3	NNC	ENSMUSG00000086075.2	novel	3492	2	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTCTCTCATGATTC	NA	False	NA	NA	False	NA	NA	NA	117527188	117531561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_117527351_117528218_117530139_117531022
ES.26926.2	chr5	+	2884	1	ISM	ENSMUSG00000086075.2	ENSMUST00000140833.2	3492	2	1474	2	1398	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTCTCTCATGATTC	NA	False	NA	NA	False	NA	NA	NA	117528677	117531561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_117528700_117531600
ES.26927.1	chr5	-	226	1	Intergenic	novelGene_22440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTCGTTACTCTAG	NA	False	NA	NA	False	AATACA	-28	NA	117497574	117497348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117497300_117497600
ES.26928.1	chr5	-	4494	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	50	-1748	25	1748	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTCTCAAGATGTC	NA	False	NA	NA	False	TATAAA	-42	NA	117527062	117514419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.11	chr5	-	3910	9	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	10	-59	intron_retention	FALSE	canonical	3	1613	junction_5	127.760273559507	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATAAGATGTTGAGTT	NA	False	NA	NA	False	CATAAA	-20	NA	117527077	117516528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.12	chr5	-	2718	9	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-1095	-60	intron_retention	FALSE	canonical	3	1613	junction_6	130.811350329396	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAATAAGATGTTGAGT	NA	False	NA	NA	False	CATAAA	-19	NA	117525991	117516529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933
ES.26928.13	chr5	-	2667	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	1	-60	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	683.026033166724	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAATAAGATGTTGAGT	NA	False	NA	NA	False	CATAAA	-19	NA	117527086	117516529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524919_117525494_117525759_117525933_117525999_117526981
ES.26928.14	chr5	-	2232	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	18	-217	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	544.02519243138	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAACAGAGACAGG	NA	False	NA	NA	False	TTTAAA	-31	NA	117527069	117516686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520529_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.16	chr5	-	1816	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	-57	1037	-57	477	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGTCTACCTGCATG	NA	False	NA	-11	True	AATAAA	-25	NA	117527169	117517204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.17	chr5	-	6945	5	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	1	472	intron_retention	FALSE	canonical	3	1613	junction_4	114.447313205684	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527086	117517209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117520531_117520843_117521620_117522595_117522670_117523452
ES.26928.18	chr5	-	3452	8	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	7	472	intron_retention	FALSE	canonical	3	1613	junction_4	128.830690981519	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCTGGGCTGTCTACCT	NA	False	NA	-16	True	AATAAA	-20	NA	117527103	117517209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117518887_117519900_117519979_117520400_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.19	chr5	-	2155	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-6	470	intron_retention	FALSE	canonical	3	1613	junction_6	128.157985064538	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527093	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.2	chr5	-	3619	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	10	-2	intron_retention	FALSE	canonical	3	1613	junction_6	128.646611371167	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGACCGTCATGCACCG	NA	False	NA	NA	False	AATAAA	-17	NA	117527077	117516169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.20	chr5	-	2264	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	5	470	intron_retention	FALSE	canonical	3	11	junction_2	726.738336679716	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527082	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518083_117518204_117518831_117518887_117519900_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.21	chr5	-	1988	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	3	470	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	680.72819541507	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527084	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
ES.26928.22	chr5	-	1899	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-8111	470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	545.69511634245	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117535223	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117534945
ES.26928.23	chr5	-	3550	8	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	470	intron_retention	FALSE	canonical	3	1613	junction_4	128.830690981519	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527087	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.25	chr5	-	4444	8	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	1	470	intron_retention	FALSE	canonical	3	19	junction_1	649.337653116699	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527086	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518083_117520531_117520843_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.26	chr5	-	4872	8	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	6	470	intron_retention	FALSE	canonical	3	1613	junction_5	139.827444679914	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527104	117517211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117524924_117525933_117525999_117526981
ES.26928.28	chr5	-	3013	8	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	5	469	intron_retention	FALSE	canonical	3	1613	junction_4	128.202804897839	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527105	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.29	chr5	-	2124	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	5	469	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	551.377765239042	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527105	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117521306_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.3	chr5	-	2778	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	15	3	-10	-3	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGACCGTCATGCACC	NA	False	NA	NA	False	AATAAA	-16	NA	117527097	117516170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.30	chr5	-	2585	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	1	469	intron_retention	FALSE	canonical	3	1613	junction_6	128.646611371167	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527086	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.31	chr5	-	2439	9	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	22	469	intron_retention	FALSE	canonical	3	1613	junction_5	127.237966032156	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527065	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.32	chr5	-	1718	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	552.384431351934	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527087	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521612_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.33	chr5	-	3602	9	NNC	ENSMUSG00000029363.15	novel	3751	9	NA	NA	6	469	intron_retention	FALSE	canonical	3	14	junction_6	759.27513746665	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527104	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117518887_117519900_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
ES.26928.34	chr5	-	4735	7	NNC	ENSMUSG00000029363.15	novel	3751	9	NA	NA	-6	469	intron_retention	FALSE	non_canonical	0	0	junction_1	691.675983872989	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGTGCTGGGCTGTCTA	NA	False	NA	-19	True	AATAAA	-17	NA	117527093	117517212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517418_117517557_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.35	chr5	-	2276	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	6	468	intron_retention	FALSE	canonical	3	1613	junction_6	125.038167012623	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527104	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.36	chr5	-	2969	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	10	468	intron_retention	FALSE	canonical	3	1613	junction_7	126.09177531651	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527077	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117524924_117525933_117525999_117526981
ES.26928.37	chr5	-	1847	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-2	468	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	696.626155121956	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527089	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518083_117518204_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.38	chr5	-	1879	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-15	468	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	694.544455020699	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527127	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517966_117518083_117518204_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.39	chr5	-	3151	9	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	10	468	intron_retention	FALSE	canonical	3	1613	junction_5	135.124884366278	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527077	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.4	chr5	-	3897	9	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	9	1	intron_retention	FALSE	canonical	3	1613	junction_5	135.124884366278	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGAGGCGTCTT	NA	False	NA	NA	False	AATATA	-17	NA	117527078	117516468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.40	chr5	-	3351	10	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	32	468	intron_retention	FALSE	canonical	3	14	junction_7	741.907068820234	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527055	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117518887_117519900_117519979_117520400_117520531_117520843_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
ES.26928.41	chr5	-	1668	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	468	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	537.245791049125	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527087	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524867_117525933_117525999_117526981
ES.26928.43	chr5	-	4867	6	NIC	ENSMUSG00000029363.15	novel	3751	9	NA	NA	1	468	intron_retention	FALSE	canonical	3	1613	junction_2	142.590883299038	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527086	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.44	chr5	-	5145	4	NIC	ENSMUSG00000029363.15	novel	1256	6	NA	NA	245	468	intron_retention	FALSE	canonical	3	1613	junction_3	37.7977071615021	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117524651	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117520926_117521459_117521620_117522595_117522670_117523452
ES.26928.45	chr5	-	1822	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	3	468	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	702.218927036009	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527084	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521205_117521306_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.46	chr5	-	2723	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	16	468	intron_retention	FALSE	canonical	3	1613	junction_6	131.396769789486	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527071	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.47	chr5	-	1703	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	16	468	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	550.336524319439	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527071	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517966_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.48	chr5	-	2368	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	1	468	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	790.233023484186	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527086	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117521306_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
ES.26928.49	chr5	-	1179	7	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-2701	468	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	652.16681574238	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117521617	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517692_117517773_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459
ES.26928.5	chr5	-	2490	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	4	302	2	0	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGAGGCGTCT	NA	False	NA	NA	False	AATATA	-16	NA	117527108	117516469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.50	chr5	-	4010	7	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-15	468	intron_retention	FALSE	canonical	3	1613	junction_3	132.456806376855	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527127	117517213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117517972_117518831_117518887_117519900_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.53	chr5	-	2814	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	30	463	intron_retention	FALSE	canonical	3	14	junction_8	708.719662490043	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTAACCGTGCTGGGC	NA	False	NA	-25	True	AATAAA	-11	NA	117527057	117517218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
ES.26928.54	chr5	-	1388	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	43	1365	18	149	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTGCCCAAAGTGCT	NA	False	NA	0	True	NA	NA	NA	117527069	117517532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.55	chr5	-	2146	8	ISM	ENSMUSG00000029363.15	ENSMUST00000150962.8	3751	9	23	2596	23	715	5prime_fragment	FALSE	canonical	3	1613	junction_4	139.10677150143	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATCCGTCTCATGATC	NA	False	NA	NA	False	GATAAA	-26	NA	117527064	117519065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.56	chr5	-	1753	9	ISM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	8	2909	6	704	5prime_fragment	FALSE	canonical	3	1613	junction_5	135.673263301949	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCACGATCAGCTCATCC	NA	False	NA	NA	False	GATAAA	-15	NA	117527104	117519076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.57	chr5	-	686	3	FSM	ENSMUSG00000029363.15	ENSMUST00000111953.2	772	3	65	21	42	-21	multi-exon	FALSE	canonical	3	1895	junction_2	55	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGTAATTTTGCTACT	NA	False	NA	NA	False	NA	NA	NA	117527045	117524366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_117524924_117525933_117525999_117526981
ES.26928.6	chr5	-	4620	7	NIC	ENSMUSG00000029363.15	novel	3751	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	1613	junction_3	132.456806376855	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGAGGCGTCT	NA	False	NA	NA	False	AATATA	-16	NA	117527109	117516469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_117518887_117519900_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.7	chr5	-	2565	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	696.626155121956	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTGTGAGGCGTCT	NA	False	NA	NA	False	AATATA	-16	NA	117527063	117516469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518083_117518204_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ES.26928.8	chr5	-	2622	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	-7648	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	693.932535363751	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGATGTTGAGTTTCT	NA	False	NA	NA	False	CATAAA	-23	NA	117534760	117516525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117530886_117531097_117534655
ES.26928.9	chr5	-	2636	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	7	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	683.409947999583	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGATGTTGAGTTTCT	NA	False	NA	NA	False	CATAAA	-23	NA	117527103	117516525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524867_117525494_117525759_117525933_117525999_117526981
ES.26929.1	chr5	+	3294	1	Intergenic	novelGene_22441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGAGTTTGATATTA	NA	False	NA	NA	False	NA	NA	NA	117556214	117559508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117556200_117559500
ES.2693.1	chr10	+	174	1	Intergenic	novelGene_2053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCCAAAGT	1262	False	NA	NA	False	NA	NA	NA	42536370	42536544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42536400_42536500
ES.26930.1	chr5	+	168	1	Intergenic	novelGene_22442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTATTTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	117627221	117627389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117627200_117627400
ES.26931.1	chr5	-	171	1	Intergenic	novelGene_22443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	117641645	117641474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117641500_117641600
ES.26932.1	chr5	-	179	1	Intergenic	novelGene_22444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	117652104	117651925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_117651900_117652100
ES.26933.1	chr5	-	5492	1	Antisense	novelGene_ENSMUSG00000061578.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACATGCTCAC	NA	False	NA	NA	False	NA	NA	NA	117757985	117752493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_117752500_117758000
ES.26934.1	chr5	+	181	1	Intergenic	novelGene_22445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGTGGTGGTGGTACA	NA	False	NA	NA	False	NA	NA	NA	117960376	117960557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_117960400_117960600
ES.26935.1	chr5	+	6057	29	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-3972	606	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.0610550480282	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTGACAGACAATAAAGAA	NA	False	NA	NA	False	NA	NA	NA	118001206	118093035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118001439_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.11	chr5	+	4704	27	NNC	ENSMUSG00000029361.19	novel	631	3	NA	NA	-25908	592	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	7.96896717710787	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATATCAGACAGTACTGA	3474	False	NA	NA	False	NA	NA	NA	118031331	118093021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118031437_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091859
ES.26935.12	chr5	+	8499	28	NNC	ENSMUSG00000029361.19	novel	631	3	NA	NA	-25868	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	11.5606588920876	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCCGGCTGGTGT	3514	False	NA	11	True	ATTAAA	-18	NA	118031371	118096905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118031437_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862_118095050_118095095
ES.26935.14	chr5	+	7962	24	NNC	ENSMUSG00000029361.19	novel	4388	28	NA	NA	-22468	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.92141706342999	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACTCA	6914	False	NA	-9	True	NA	NA	NA	118034771	118096885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118034901_118035775_118035868_118038535_118038678_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091859_118095046_118095097
ES.26935.15	chr5	+	4390	16	NNC	ENSMUSG00000029361.19	novel	631	3	NA	NA	-5593	1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.8461386514636	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118051646	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118051741_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.16	chr5	+	160	1	Intergenic	novelGene_22447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	7077	False	NA	NA	False	NA	NA	NA	118059686	118059846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118059700_118059800
ES.26935.17	chr5	+	3997	12	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	56128	-2242	4067	1787	3prime_fragment	FALSE	canonical	3	11	junction_7	14.7053709196435	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	8697	False	NA	NA	False	NA	NA	NA	118061306	118094216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.19	chr5	+	2759	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82449	-2262	30388	1807	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118087627	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118087894_118090829_118090949_118091862
ES.26935.2	chr5	+	7204	29	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-3918	1807	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.0610550480282	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118001260	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118001439_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.24	chr5	+	3797	13	Fusion	ENSMUSG00000029361.19_ENSMUSG00000032898.10	novel	4388	28	NA	NA	-27149	-197	multi-exon	FALSE	canonical	1	1	junction_2	160.58510637319	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCCAAAAGTTT	NA	False	NA	23	True	AATAAA	-17	NA	118087645	118148068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_118087894_118090829_118090949_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.25	chr5	+	5363	4	NNC	ENSMUSG00000029361.19	novel	4388	28	NA	NA	30406	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.3113940087595	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTGCCGGCTGGTGTC	NA	False	NA	12	True	ATTAAA	-19	NA	118087645	118096906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118087894_118090829_118090949_118091862_118095048_118095095
ES.26935.26	chr5	+	5415	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82467	-4936	30406	5	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGGCTGGTGTCTTTT	NA	False	NA	16	True	ATTAAA	-23	NA	118087645	118096910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118087894_118090829_118090949_118091862
ES.26935.3	chr5	+	7138	29	NIC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-3056	1788	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	10.9588748863882	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	118002122	118094217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118002254_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.30	chr5	+	1530	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82471	-1055	30410	600	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGTACTGACAGACAAT	NA	False	NA	NA	False	NA	NA	NA	118087649	118093029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118087894_118090829_118090949_118091862
ES.26935.32	chr5	+	2657	4	NNC	ENSMUSG00000029361.19	novel	4388	28	NA	NA	30418	1807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.3113940087595	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118087657	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118087894_118090829_118090949_118091862_118092214_118092285
ES.26935.34	chr5	+	894	3	ISM	ENSMUSG00000029361.19	ENSMUST00000102557.10	4591	29	82504	-452	30443	-3	3prime_fragment	FALSE	canonical	3	46	junction_1	6.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGTTCCTAGATGTCG	NA	False	NA	NA	False	NA	NA	NA	118087682	118092426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118087894_118090829_118090949_118091862
ES.26935.36	chr5	+	3668	2	NNC	ENSMUSG00000029361.19	novel	10123	29	NA	NA	35930	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACTCA	NA	False	NA	-9	True	NA	NA	NA	118093169	118096885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118095050_118095097
ES.26935.37	chr5	+	3971	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	-10	-2	-10	2	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGACCTGCCCGCTTTC	NA	False	NA	13	True	AATAAA	-24	NA	118114784	118148268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ES.26935.38	chr5	+	3942	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-56	-3	-2	2	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGACCTGCCCGCTTTC	NA	False	NA	13	True	AATAAA	-24	NA	118114792	118148268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.39	chr5	+	3481	12	NNC	ENSMUSG00000032898.10	novel	3883	12	NA	NA	7	-197	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	133.442592974787	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCCAAAAGTTT	NA	False	NA	23	True	AATAAA	-17	NA	118114801	118148068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118114853_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.4	chr5	+	9765	30	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-3045	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	11.2466668334782	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCCGGCTGGTGT	NA	False	NA	11	True	ATTAAA	-18	NA	118002133	118096905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118002254_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862_118095048_118095097
ES.26935.41	chr5	+	2430	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	19	1510	19	129	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114813	118146756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ES.26935.42	chr5	+	2392	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-17	1508	-7	130	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTTTTTTGTTGTTGTT	NA	False	NA	29	True	AATACA	-21	NA	118114831	118146757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.44	chr5	+	3735	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	38	186	-6	-185	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTCTCCATTTTCA	NA	False	NA	35	True	AATAAA	-29	NA	118114832	118148080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ES.26935.45	chr5	+	2220	9	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-14	13835	-4	8793	5prime_fragment	FALSE	canonical	3	395	junction_7	31.372509861342	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTAAATGCTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	118114834	118134430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434
ES.26935.46	chr5	+	3710	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-13	186	-3	-186	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTTTCTCCATTTTC	NA	False	NA	34	True	AATAAA	-28	NA	118114835	118148079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.48	chr5	+	10014	10	NIC	ENSMUSG00000032898.10	novel	3959	12	NA	NA	3	-197	intron_retention	FALSE	canonical	3	395	junction_7	29.6514734295483	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCCAAAAGTTT	NA	False	NA	23	True	AATAAA	-17	NA	118114841	118148068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118140238_118146074
ES.26935.5	chr5	+	7206	30	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-2734	1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5619614956388	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118002444	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118002539_118004903_118005992_118017348_118017476_118031890_118032020_118033103_118033190_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.50	chr5	+	6007	9	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	-7	10041	3	-8403	5prime_fragment	FALSE	canonical	3	395	junction_7	31.372509861342	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGCCTTCCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	118114841	118138224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434
ES.26935.51	chr5	+	6249	11	NIC	ENSMUSG00000032898.10	novel	3883	12	NA	NA	4	-197	intron_retention	FALSE	canonical	3	306	junction_8	51.3985408353194	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCCAAAAGTTT	NA	False	NA	23	True	AATAAA	-17	NA	118114842	118148068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.53	chr5	+	3854	12	NNC	ENSMUSG00000032898.10	novel	3959	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	135.943230737948	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	False	NA	11	True	AATAAA	-22	NA	118114843	118148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132581_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.55	chr5	+	3756	12	NNC	ENSMUSG00000032898.10	novel	3883	12	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.245611837112	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACCATGCCAGTGAC	NA	False	NA	1	True	AATAAA	-12	NA	118114852	118148256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118115088_118116019_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.57	chr5	+	2372	12	NNC	ENSMUSG00000032898.10	novel	3959	12	NA	NA	10	128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	154.32047795855	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTTTTTTGTTGTTG	NA	False	NA	27	True	AATACA	-19	NA	118114858	118146755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126854_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ES.26935.59	chr5	+	2937	7	ISM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	12338	192	9798	-192	3prime_fragment	FALSE	canonical	3	306	junction_4	60.4614202060565	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCAAAAGTTTTCTCC	NA	False	NA	28	True	AATAAA	-22	NA	118127186	118148073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ES.26935.6	chr5	+	7110	29	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-2724	1807	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.9588748863882	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCAAGGTGGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	118002454	118094236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118002539_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26935.7	chr5	+	5297	29	NNC	ENSMUSG00000029361.19	novel	4591	29	NA	NA	-2713	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8.28717659509964	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGATGTCGTTAATCC	NA	False	NA	NA	False	NA	NA	NA	118002465	118092433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118002539_118004903_118005992_118017348_118017476_118031890_118032020_118033845_118033990_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091859
ES.26935.8	chr5	+	9415	28	FSM	ENSMUSG00000029361.19	ENSMUST00000171055.2	4388	28	-20	-5007	-15	-20	multi-exon	FALSE	canonical	2	8	junction_3	10.777205024873	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGACTCA	NA	False	NA	-9	True	NA	NA	NA	118005163	118096885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ES.26936.1	chr5	-	134	1	Intergenic	novelGene_22446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	118021755	118021621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118021600_118021800
ES.26937.1	chr5	+	1006	8	FSM	ENSMUSG00000029359.14	ENSMUST00000124648.8	981	8	-1	-24	-1	-1	multi-exon	FALSE	canonical	3	17	junction_5	26.954231805876	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	NA	False	NA	8	True	AATAAA	-13	NA	118165828	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
ES.26937.10	chr5	+	1053	9	NNC	ENSMUSG00000029359.14	novel	1031	8	NA	NA	2725	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.2849105392712	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCCATCTGTCCCTCA	NA	False	NA	14	True	AATAAA	-19	NA	118182106	118199940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118182214_118183070_118183234_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ES.26937.11	chr5	+	6704	5	NNC	ENSMUSG00000029359.14	novel	1031	8	NA	NA	8416	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	39.3406596284302	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	NA	False	NA	8	True	AATAAA	-13	NA	118187797	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118189911_118189974_118191730_118192894_118193035_118194441_118194710_118197506
ES.26937.3	chr5	+	1125	9	NNC	ENSMUSG00000029359.14	novel	1031	8	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0747619821845	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	NA	False	NA	8	True	AATAAA	-13	NA	118165860	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118166053_118179442_118179599_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ES.26937.4	chr5	+	5238	7	ISM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	84	-2179	-43	2179	intron_retention	FALSE	canonical	3	55	junction_1	13.6137185711081	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAGCAAAGCAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	118165891	118202122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506
ES.26937.5	chr5	+	925	8	NNC	ENSMUSG00000029359.14	novel	1031	8	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.3819226595322	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	NA	False	NA	8	True	AATAAA	-13	NA	118165895	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199675
ES.26937.6	chr5	+	857	7	NIC	ENSMUSG00000029359.14	novel	1031	8	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	32.0208265560609	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	NA	False	NA	8	True	AATAAA	-13	NA	118165924	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118199666
ES.26937.7	chr5	+	830	7	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	32.949456242352	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGGCATCCCCATCTGT	4344	False	NA	8	True	AATAAA	-13	NA	118174071	118199934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118174195_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ES.26937.8	chr5	+	907	8	FSM	ENSMUSG00000029359.14	ENSMUST00000151792.8	785	8	-24	-98	-24	1	multi-exon	FALSE	canonical	3	17	junction_5	31.162510181568	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCATCCCCATCTGTCC	4344	False	NA	10	True	AATAAA	-15	NA	118174071	118199936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194509_118194601_118194710_118197506_118197555_118199666
ES.26938.1	chr5	-	177	1	Intergenic	novelGene_22448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAAACCATTA	NA	False	NA	NA	False	NA	NA	NA	118173568	118173391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118173400_118173600
ES.26939.1	chr5	-	1576	3	Antisense	novelGene_ENSMUSG00000029359.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAAAAGCAAATAAT	NA	False	NA	NA	False	NA	NA	NA	118191404	118189559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_118189962_118190035_118190677_118190871
ES.2694.1	chr10	+	3042	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	-32	-4	-32	4	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTAATTGAATTTTT	NA	False	NA	13	True	AATAAA	-22	NA	42554879	42578459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ES.2694.10	chr10	+	2968	6	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.0172710324514	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATTGTAATGTTGTAA	NA	False	NA	3	True	AATAAA	-12	NA	42554925	42578449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574121_42574270_42576478
ES.2694.11	chr10	+	1788	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	22	1196	22	771	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTTTATTTAGTA	NA	False	NA	NA	False	TATAAA	-17	NA	42554933	42577259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ES.2694.12	chr10	+	3122	7	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	103.345160613462	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554936	42578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42572954_42573096_42574103_42574270_42576478
ES.2694.13	chr10	+	2760	7	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.2038455440025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTAATGTTGTAATT	NA	False	NA	5	True	AATAAA	-14	NA	42554938	42578451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478_42577598_42577812
ES.2694.14	chr10	+	2860	5	NIC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	94.4679178345749	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTAATGTTGTAATT	NA	False	NA	5	True	AATAAA	-14	NA	42554938	42578451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42555394_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ES.2694.15	chr10	+	1494	6	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	0	621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.1217339820319	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGAAGTCCCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	42554961	42577109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555278_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ES.2694.2	chr10	+	3016	7	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	-2	27520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.2038455440025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCTAAAAAAAGAACTGCT	NA	False	NA	NA	False	NA	NA	NA	42554909	42605975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478_42578451_42605962
ES.2694.3	chr10	+	5215	5	ISM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	0	0	0	0	intron_retention	FALSE	canonical	3	210	junction_2	7.79021822544144	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554911	42578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103
ES.2694.5	chr10	+	3494	5	NIC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	2	767	intron_retention	FALSE	canonical	3	210	junction_2	8.347903928532	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTTTATTT	NA	False	NA	NA	False	TATAAA	-13	NA	42554913	42577255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42574270_42576478
ES.2694.6	chr10	+	2963	7	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.2038455440025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554914	42578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478_42577773_42577812
ES.2694.7	chr10	+	5886	5	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	11	0	intron_retention	FALSE	canonical	1	1	junction_4	95.5798095834052	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554922	42578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42573096_42574103
ES.2694.8	chr10	+	4684	5	NIC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	210	junction_2	8.347903928532	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554923	42578455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42574270_42576478
ES.2694.9	chr10	+	2841	7	NNC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.2038455440025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTAATGTTGTAATT	NA	False	NA	5	True	AATAAA	-14	NA	42554923	42578451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478_42577355_42577503
ES.26940.1	chr5	+	11857	2	Antisense	novelGene_ENSMUSG00000088293.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAAACTAGAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	118277027	118288940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_118283118_118283173
ES.26940.2	chr5	+	8280	2	Antisense	novelGene_ENSMUSG00000088293.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAAACTAGAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	118280526	118288940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_118282778_118282911
ES.26941.1	chr5	-	4969	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	8	23	8	-23	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTGATGATGGAGGCAC	NA	False	NA	NA	False	AATAAA	-21	NA	118293521	118203052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.10	chr5	-	4770	10	NIC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	171	-1651	intron_retention	FALSE	canonical	3	339	junction_7	27.6927587807515	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGCGTGTGTGCTGCTCC	NA	False	NA	-32	True	ATTAAA	-13	NA	118293320	118204680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118206295_118206669_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.12	chr5	-	2956	10	NIC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	250	-1651	intron_retention	FALSE	canonical	0	0	junction_9	117.185512946117	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGCGTGTGTGCTGCTCC	NA	False	NA	-32	True	ATTAAA	-13	NA	118293241	118204680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118293128
ES.26941.13	chr5	-	3229	10	NIC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	-9	-1653	intron_retention	FALSE	canonical	2	2	junction_7	121.102140340548	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGCGTGTGTGCTGCT	NA	False	NA	-34	True	ATTAAA	-11	NA	118293500	118204682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118266873_118267039_118280732_118280838_118293128
ES.26941.14	chr5	-	3271	11	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	27	-1653	intron_retention	FALSE	canonical	0	0	junction_7	115.472983853367	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGCGTGTGTGCTGCT	NA	False	NA	-34	True	ATTAAA	-11	NA	118293464	118204682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263011_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.15	chr5	-	1066	2	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	28	-1653	intron_retention	FALSE	non_canonical	0	0	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGCGTGTGTGCTGCT	NA	False	NA	-34	True	ATTAAA	-11	NA	118293463	118204682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118205720_118293434
ES.26941.17	chr5	-	3058	11	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	28	-1653	intron_retention	FALSE	non_canonical	0	0	junction_10	115.825083639081	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGCGTGTGTGCTGCT	NA	False	NA	-34	True	ATTAAA	-11	NA	118293463	118204682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293351
ES.26941.18	chr5	-	4784	9	NIC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	-5	-1655	intron_retention	FALSE	canonical	0	0	junction_5	128.165359497019	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGAGCGTGTGTGCTG	NA	False	NA	-36	True	ATTAAA	-9	NA	118293496	118204684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118206295_118206669_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.19	chr5	-	1544	1	Intergenic	novelGene_22449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGCAGAAAACCTGGAC	NA	False	NA	NA	False	NA	NA	NA	118210626	118209082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118209100_118210600
ES.26941.20	chr5	-	5796	8	FSM	ENSMUSG00000032867.9	ENSMUST00000201545.2	1937	8	20	-3879	20	3879	multi-exon	FALSE	canonical	3	339	junction_5	29.5476094547392	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTCAGACCAATTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	118293471	118211237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.21	chr5	-	1950	8	FSM	ENSMUSG00000032867.9	ENSMUST00000201545.2	1937	8	-14	1	-14	-1	multi-exon	FALSE	canonical	3	339	junction_5	29.5476094547392	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGGTCCAGATTTTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	118293505	118215117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.22	chr5	-	1102	6	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	-15	-24686	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	157.537297171178	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAGTAGAAATGCCTG	NA	False	NA	NA	False	NA	NA	NA	118293506	118239802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118240010_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.23	chr5	-	3113	1	Intergenic	novelGene_22450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118245270	118242157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118242200_118245300
ES.26941.24	chr5	-	4540	1	Intergenic	novelGene_22451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAACACATGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	118248758	118244218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118244200_118248800
ES.26941.3	chr5	-	3355	11	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	17	-1626	intron_retention	FALSE	canonical	0	0	junction_3	116.476650020508	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCGTTTGAAGTCTTCC	NA	False	NA	-7	True	ATTAAA	-38	NA	118293512	118204655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118206295_118206669_118206781_118208410_118208583_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.5	chr5	-	10345	10	NIC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	27	-1647	intron_retention	FALSE	canonical	3	339	junction_7	27.2727422371826	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTGTGCTGCTCCTGTA	NA	False	NA	-28	True	ATTAAA	-17	NA	118293464	118204676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118206295_118206669_118206781_118208410_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.6	chr5	-	3366	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	-14	1648	-14	-1648	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTGTGCTGCTCCTGT	NA	False	NA	-29	True	ATTAAA	-16	NA	118293543	118204677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ES.26941.7	chr5	-	5559	4	NNC	ENSMUSG00000032867.9	novel	5000	11	NA	NA	78810	-1649	intron_retention	FALSE	canonical	0	0	junction_3	172.438072619967	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTGTGTGCTGCTCCTG	NA	False	NA	-30	True	ATTAAA	-15	NA	118214681	118204678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118206295_118206669_118206781_118208410_118208585_118211023
ES.26942.1	chr5	+	3289	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-104	2197	-104	-2197	multi-exon	FALSE	canonical	3	61	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGGGTTTCAGCAGACA	NA	False	NA	NA	False	AATAAA	-16	NA	118307708	118325346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26942.2	chr5	+	5449	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-67	0	-67	0	multi-exon	FALSE	canonical	3	61	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCCTCTGTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	118307745	118327543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26942.3	chr5	+	3088	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-52	2346	-52	2304	multi-exon	FALSE	canonical	3	61	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACTTCCACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	118307760	118325197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26942.4	chr5	+	1576	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-13	3819	-13	831	multi-exon	FALSE	canonical	3	61	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAGCTGTGTGCTAGAC	NA	False	NA	NA	False	NA	NA	NA	118307799	118323724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26942.5	chr5	+	606	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	-11	4787	-11	-137	multi-exon	FALSE	canonical	3	61	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCGGGGGACGTGGT	NA	False	NA	NA	False	AATACA	-18	NA	118307801	118322756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26942.6	chr5	+	1401	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	272	3709	272	941	multi-exon	FALSE	canonical	3	61	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTCCTCTGCGTGGAT	NA	False	NA	NA	False	TTTAAA	-21	NA	118308084	118323834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118308194_118322542
ES.26943.1	chr5	+	161	1	Intergenic	novelGene_22452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	118334551	118334712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118334600_118334700
ES.26944.1	chr5	-	4396	11	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	878	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	5.51724568965349	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGTCACTGTGCCT	NA	False	NA	NA	False	AATAAA	-24	NA	118382048	118328799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381097_118381945
ES.26944.10	chr5	-	2167	4	ISM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	100	44974	-22	1211	5prime_fragment	FALSE	canonical	3	9	junction_1	3.55902608401044	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAGACCATCTTTTGT	NA	False	NA	NA	False	AAAAAG	-9	NA	118383081	118373780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_118375662_118380522_118380582_118380914_118381097_118383036
ES.26944.2	chr5	-	4405	11	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	31	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	5.24976189936267	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCTGTGAGTCACTG	NA	False	NA	NA	False	AATAAA	-19	NA	118383150	118328804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375665_118380522_118380582_118380914_118381097_118383036
ES.26944.3	chr5	-	3906	10	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	57	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	6.64626507943919	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATCTGTGAGTCACTG	NA	False	NA	NA	False	AATAAA	-19	NA	118383124	118328804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118380522_118380582_118380914_118381097_118383036
ES.26944.4	chr5	-	4267	11	NNC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.87095335452075	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTATCTGTGAGTCAC	NA	False	NA	NA	False	AATAAA	-17	NA	118383056	118328806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370508_118370568_118372205_118372283_118375191_118375665_118380522_118380582_118380914_118381097_118383036
ES.26944.6	chr5	-	6360	5	NNC	ENSMUSG00000032850.17	novel	4381	12	NA	NA	-210	-1544	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	6.21992765231236	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACCATGCCTGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	118367420	118333662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118334038_118334117_118339315_118339430_118339497_118340838_118340989_118366848
ES.26944.7	chr5	-	6089	8	NNC	ENSMUSG00000032850.17	novel	799	5	NA	NA	-39	14128	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.36172035809251	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTCCTTCTATTTCT	NA	False	NA	NA	False	NA	NA	NA	118383098	118358092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118363123_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381051_118383036
ES.26944.8	chr5	-	4048	3	NNC	ENSMUSG00000032850.17	novel	4381	12	NA	NA	-3197	7386	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCACTCTCTTTTCACA	NA	False	NA	NA	False	CATAAA	-16	NA	118370407	118364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_118365217_118365307_118365415_118366848
ES.26944.9	chr5	-	4786	6	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	-14	5611	intron_retention	FALSE	canonical	3	6	junction_3	6.61513416341649	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGGAGCTCTGTGATC	NA	False	NA	NA	False	NA	NA	NA	118383073	118366609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_118370568_118372205_118372283_118375191_118375665_118380522_118380582_118380914_118381097_118383036
ES.26945.1	chr5	+	5509	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.3255753472143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTTTTACAGTGCC	1640	False	NA	5	True	AATAAA	-15	NA	118383292	118404155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129
ES.26945.10	chr5	+	3496	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.3255753472143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTTACAGTGCCGG	1670	False	NA	7	True	AATAAA	-17	NA	118383322	118404157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118401223_118403343
ES.26945.11	chr5	+	1923	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	34	3692	34	-3692	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTCCCTTGTTCTGTC	1673	False	NA	NA	False	NA	NA	NA	118383325	118400466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.12	chr5	+	5910	7	Fusion	ENSMUSG00000119733.1_ENSMUSG00000032840.8	novel	5649	5	NA	NA	57	1825	multi-exon	FALSE	non_canonical	0	0	junction_4	87.1913604282748	121	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTGGTGTGATGGCTC	1696	False	NA	NA	False	NA	NA	NA	118383348	118406470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118398084_118398234_118399164_118401221_118403363
ES.26945.13	chr5	+	3445	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	59	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	73.3255753472143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTACATGCTGTTTTACAG	1698	False	NA	1	True	AATAAA	-11	NA	118383350	118404151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118401235_118403372
ES.26945.14	chr5	+	1209	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	136	4304	136	-4304	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGAGTTTGCTGTGTCTC	1775	False	NA	NA	False	NA	NA	NA	118383427	118399854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.15	chr5	+	161	1	Intergenic	novelGene_22453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAATAAA	6672	False	NA	NA	False	NA	NA	NA	118388324	118388485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118388300_118388500
ES.26945.16	chr5	+	194	1	Intergenic	novelGene_22454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	118392649	118392843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118392600_118392800
ES.26945.17	chr5	+	2930	3	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	14178	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTGTTTTACAGTG	NA	False	NA	3	True	AATAAA	-13	NA	118397469	118404153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118397554_118399164_118401221_118403363
ES.26945.2	chr5	+	3507	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.3255753472143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTGTTTTACAGTGC	1644	False	NA	4	True	AATAAA	-14	NA	118383296	118404154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118401221_118403353
ES.26945.3	chr5	+	1069	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	6	4574	6	-4574	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTCTCATTTCCTGAG	1645	False	NA	6	True	AATACA	-15	NA	118383297	118399584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.4	chr5	+	3487	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.3255753472143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTGTTTTACAGTGC	1645	False	NA	4	True	AATAAA	-14	NA	118383297	118404154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118401221_118403372
ES.26945.5	chr5	+	3369	7	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	17	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	85.9335983962811	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTTTTACAGTGCC	1656	False	NA	5	True	AATAAA	-15	NA	118383308	118404155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129_118401259_118403382
ES.26945.6	chr5	+	2651	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	17	2981	17	-2981	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1656	False	NA	7	True	NA	NA	NA	118383308	118401177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.7	chr5	+	5618	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	25	6	25	-6	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATGCTGTTTTACAGT	1664	False	NA	2	True	AATAAA	-12	NA	118383316	118404152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.8	chr5	+	4732	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	28	889	28	-889	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGGTGATTCAGATG	1667	False	NA	NA	False	CATAAA	-11	NA	118383319	118403269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ES.26945.9	chr5	+	3370	7	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	85.9335983962811	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTGTTTTACAGTGC	1667	False	NA	4	True	AATAAA	-14	NA	118383319	118404154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400129_118401233_118403343
ES.26946.1	chr5	+	162	1	Intergenic	novelGene_22455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	118520201	118520363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118520200_118520400
ES.26947.1	chr5	-	4079	1	Intergenic	novelGene_22456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCGAGAAATATTACAGG	NA	False	NA	NA	False	NA	NA	NA	118549595	118545516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118545500_118549600
ES.26948.1	chr5	+	243	1	Intergenic	novelGene_22457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCATTTTCCTCTCAC	5627	False	NA	NA	False	NA	NA	NA	118566790	118567033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118566800_118567000
ES.26949.1	chr5	-	3784	1	Intergenic	novelGene_22458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAGTTAAAATGTGTAA	NA	False	NA	NA	False	TTTAAA	-8	NA	118576116	118572332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118572300_118576100
ES.2695.1	chr10	+	3992	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	-78	2118	-78	4	multi-exon	TRUE	canonical	3	208	junction_15	23.0789947788026	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTATTGTTCTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	42637413	42706392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.10	chr10	+	2528	19	NIC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	61.2636732029756	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637603	42705278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.11	chr10	+	3509	20	NNC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	-7	-452	intron_retention	FALSE	canonical	0	0	junction_15	78.1832494759265	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTTGTAATCGTG	NA	False	NA	NA	False	AATAAA	-16	NA	42637603	42705936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681075_42681227_42682519_42682668_42686838_42686922_42688431_42688833_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.13	chr10	+	2637	21	NNC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	58.3228085743477	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637618	42705278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681107_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.16	chr10	+	4257	19	NIC	ENSMUSG00000019802.14	novel	5206	20	NA	NA	11	-1	intron_retention	FALSE	canonical	3	215	junction_7	22.5638326356556	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637621	42705278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.18	chr10	+	231	1	Intergenic	novelGene_2055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTAGCACTTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	42650840	42651071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42650800_42651100
ES.2695.19	chr10	+	3518	20	ISM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	21945	2122	21635	0	3prime_fragment	FALSE	canonical	3	208	junction_14	23.2247837819311	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTGTTATTGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	42659436	42706388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.2	chr10	+	2805	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	-4	3231	-4	0	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTGGGCTGTGCATT	NA	False	NA	23	True	AATAAA	-23	NA	42637487	42705279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.20	chr10	+	2306	6	NIC	ENSMUSG00000019802.14	novel	5206	20	NA	NA	-5433	-5	intron_retention	FALSE	canonical	3	254	junction_4	13.5852861581934	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAATTTTTTGTTAT	9527	False	NA	NA	False	AATAAA	-15	NA	42688490	42706383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.21	chr10	+	191	1	Intergenic	novelGene_2056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAACTGTGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	42699419	42699610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42699400_42699600
ES.2695.4	chr10	+	2891	20	NNC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	-41	-1	intron_retention	FALSE	canonical	0	0	junction_12	78.7931124568456	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTGTGGGCTGTGCAT	NA	False	NA	22	True	AATAAA	-22	NA	42637569	42705278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681075_42681231_42682519_42682668_42686838_42686922_42688431_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.5	chr10	+	3384	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	78	2570	-41	-448	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTGTAATCGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	42637569	42705940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.2695.6	chr10	+	5809	19	NNC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	-41	-450	intron_retention	FALSE	canonical	2	4	junction_9	60.5474000624386	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTGTAATCGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	42637569	42705938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681075_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ES.26950.1	chr5	+	180	1	Intergenic	novelGene_22459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118581112	118581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118581100_118581300
ES.26951.1	chr5	+	150	1	Intergenic	novelGene_22460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCATAGTCAAATGT	4756	False	NA	NA	False	NA	NA	NA	118619731	118619881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118619700_118619900
ES.26952.1	chr5	-	157	1	Intergenic	novelGene_22461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	118628351	118628194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118628200_118628400
ES.26953.1	chr5	+	9130	31	NNC	ENSMUSG00000018076.13	novel	4389	11	NA	NA	-4371	-594	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	22.3463643575415	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTATGTACTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	118694372	118902909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118694913_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.10	chr5	+	9411	32	NNC	ENSMUSG00000018076.13	novel	7781	31	NA	NA	-153	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	22.4506395784572	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAACCTCGAGTGGCTC	NA	False	NA	23	True	AATAAA	-11	NA	118698590	118903496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765_118901610_118901707
ES.26953.14	chr5	+	2103	5	FSM	ENSMUSG00000018076.13	ENSMUST00000201614.2	2218	5	139	-24	79	24	multi-exon	FALSE	canonical	3	9	junction_4	2.29128784747792	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGAAGCCAGGTGTGG	NA	False	NA	NA	False	TTTAAA	-36	NA	118698882	118858203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547
ES.26953.15	chr5	+	8898	28	NIC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	31781	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	22.6434763965169	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCGAGTGGCTCTT	7416	False	NA	25	True	AATAAA	-13	NA	118731420	118903498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.16	chr5	+	4024	1	FSM	ENSMUSG00000107286.2	ENSMUST00000201539.2	2417	1	1756	-3363	1756	3363	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTCAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118742536	118746560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118742500_118746600
ES.26953.17	chr5	+	3038	1	Intergenic	novelGene_22466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118788246	118791284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118788200_118791300
ES.26953.18	chr5	+	7737	28	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	120222	1044	-66378	478	3prime_fragment	FALSE	canonical	3	9	junction_1	20.3821514753824	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCAGTGCTATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	118819005	118902459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.19	chr5	+	5445	1	NIC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-32625	24	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGAAGCCAGGTGTGG	NA	False	NA	NA	False	TTTAAA	-36	NA	118852758	118858203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118852800_118858200
ES.26953.2	chr5	+	9750	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	-454	0	-414	0	multi-exon	FALSE	canonical	3	9	junction_4	21.22063984793	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118698329	118903503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.20	chr5	+	6815	25	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	161118	1522	-25482	0	3prime_fragment	FALSE	canonical	3	20	junction_1	19.1135132534259	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTAAAGCATTCGCA	NA	False	NA	NA	False	TTTAAA	-14	NA	118859901	118901981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.21	chr5	+	8237	24	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	163267	0	-23333	0	3prime_fragment	FALSE	canonical	3	20	junction_5	18.7174796745881	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118862050	118903503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.23	chr5	+	7231	21	NNC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-17551	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	19.4455007649585	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118867832	118903503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876382_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.25	chr5	+	6773	18	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	173239	3	-13361	-3	3prime_fragment	FALSE	canonical	3	22	junction_1	16.2453080796295	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGAGTGGCTCTTTT	NA	False	NA	27	True	AATAAA	-15	NA	118872022	118903500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.26	chr5	+	4548	15	ISM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	181598	1209	-5002	313	3prime_fragment	FALSE	canonical	3	34	junction_1	13.0464241719128	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAACATGTGGTGGGG	NA	False	NA	NA	False	TTTAAA	-5	NA	118880381	118902294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.27	chr5	+	6215	12	NIC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-1501	-594	intron_retention	FALSE	canonical	3	47	junction_4	9.19845477501161	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTATGTACTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	118883882	118902909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118897329_118899350_118899464_118900765
ES.26953.28	chr5	+	4169	13	ISM	ENSMUSG00000018076.13	ENSMUST00000201010.2	7781	31	185102	-745	-1478	745	3prime_fragment	FALSE	canonical	3	7	junction_6	18.7666592658363	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAACACA	NA	False	NA	NA	False	GGGGCT	-39	NA	118883905	118902726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.29	chr5	+	3021	11	NNC	ENSMUSG00000018076.13	novel	7781	31	NA	NA	1371	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	25.3266657892428	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	118886754	118901963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895296_118897203_118897329_118899350_118899464_118900765
ES.26953.3	chr5	+	9653	30	NIC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-407	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.820040096701	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCGAGTGGCTCTT	NA	False	NA	25	True	AATAAA	-13	NA	118698336	118903498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118698923_118731397_118731636_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.30	chr5	+	5421	10	NIC	ENSMUSG00000018076.13	novel	7781	31	NA	NA	-1502	-3	intron_retention	FALSE	canonical	3	7	junction_3	20.8243684415075	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGAGTGGCTCTTTT	NA	False	NA	27	True	AATAAA	-15	NA	118886949	118903500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118887047_118887673_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.31	chr5	+	2915	6	ISM	ENSMUSG00000018076.13	ENSMUST00000202538.4	4389	11	6942	-928	3874	-594	3prime_fragment	FALSE	canonical	3	60	junction_2	7.31026675299883	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTATGTACTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	118892325	118902909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.32	chr5	+	3506	6	ISM	ENSMUSG00000018076.13	ENSMUST00000202538.4	4389	11	6942	-1519	3874	-3	3prime_fragment	FALSE	canonical	3	60	junction_2	7.31026675299883	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGAGTGGCTCTTTT	NA	False	NA	27	True	AATAAA	-15	NA	118892325	118903500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.33	chr5	+	2141	1	NIC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	12312	-599	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTTATTATGTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	118900763	118902904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_118900800_118902900
ES.26953.4	chr5	+	9660	32	NNC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-406	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.7878511547215	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118698337	118903503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118698923_118731397_118731423_118731501_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876382_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.5	chr5	+	9132	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	-427	591	-387	-591	multi-exon	FALSE	canonical	3	9	junction_4	21.22063984793	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTACTTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-28	NA	118698356	118902912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.6	chr5	+	9750	31	FSM	ENSMUSG00000018076.13	ENSMUST00000201010.2	7781	31	-447	-1522	-387	0	multi-exon	FALSE	canonical	3	7	junction_24	21.7660285766605	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118698356	118903503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.7	chr5	+	9379	32	NNC	ENSMUSG00000018076.13	novel	9296	31	NA	NA	-323	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.0319038369484	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTCGAGTGGCTCTTT	NA	False	NA	26	True	AATAAA	-14	NA	118698420	118903499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118698508_118698783_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.8	chr5	+	8901	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	-343	738	-303	-738	multi-exon	FALSE	canonical	3	9	junction_4	21.22063984793	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTATAAAAAGTTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	118698440	118902765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26953.9	chr5	+	8042	31	NNC	ENSMUSG00000018076.13	novel	7781	31	NA	NA	-219	264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	22.7297162322806	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTTGTAAAAGTATTT	NA	False	NA	NA	False	AAGAAA	-24	NA	118698524	118902245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886910_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ES.26954.1	chr5	-	182	1	Intergenic	novelGene_22462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAGAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	118696832	118696650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118696600_118696800
ES.26955.1	chr5	-	8126	1	Intergenic	novelGene_22463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGCAGGAAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	118722063	118713937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118713900_118722100
ES.26956.1	chr5	-	3451	1	Intergenic	novelGene_22464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	118771461	118768010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118768000_118771500
ES.26957.1	chr5	-	1505	1	Intergenic	novelGene_22465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGGAGGGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	118779068	118777563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118777600_118779100
ES.26958.1	chr5	-	179	1	Intergenic	novelGene_22467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118970413	118970234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_118970200_118970400
ES.26959.1	chr5	+	151	1	Intergenic	novelGene_22468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	118990632	118990783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_118990600_118990800
ES.2696.1	chr10	-	177	1	Intergenic	novelGene_2054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	42649450	42649273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_42649300_42649400
ES.26960.1	chr5	-	1811	2	Intergenic	novelGene_22469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTTAGCCTAGTGT	NA	False	NA	NA	False	NA	NA	NA	119236043	119233553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119235152_119235830
ES.26961.1	chr5	+	164	1	Intergenic	novelGene_22470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	119620555	119620719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119620600_119620700
ES.26962.1	chr5	+	174	1	Intergenic	novelGene_22471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTTTAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	119654160	119654334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119654200_119654300
ES.26963.1	chr5	+	177	1	Intergenic	novelGene_22472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAACATTTAAAA	9232	False	NA	NA	False	NA	NA	NA	119696093	119696270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119696100_119696300
ES.26964.1	chr5	-	1089	1	NIC	ENSMUSG00000087516.8	novel	969	4	NA	NA	-456	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	119709283	119708194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_119708200_119709300
ES.26965.1	chr5	+	303	1	Intergenic	novelGene_22473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	119716506	119716809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119716500_119716800
ES.26966.1	chr5	-	172	1	Intergenic	novelGene_22474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGATTTATTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	119717000	119716828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119716800_119717000
ES.26967.1	chr5	-	159	1	Intergenic	novelGene_22475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	119722462	119722303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119722300_119722500
ES.26968.1	chr5	+	2892	1	Antisense	novelGene_ENSMUSG00000087516.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCGTCATTTTTACTC	NA	False	NA	NA	False	NA	NA	NA	119749787	119752679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_119749800_119752700
ES.26969.1	chr5	+	1849	5	NNC	ENSMUSG00000085708.2	novel	1701	4	NA	NA	1447	-13	intron_retention	FALSE	canonical	0	0	junction_1	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	119765453	119772516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119765704_119766228_119766270_119769740_119769846_119770194_119770284_119771152
ES.2697.1	chr10	+	1859	1	ISM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	69159	1	12727	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCCCTGATTTCGGT	5923	False	NA	NA	False	NA	NA	NA	42706650	42708509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42706600_42708500
ES.26970.1	chr5	-	966	3	NNC	ENSMUSG00000087516.8	novel	1008	3	NA	NA	-1115	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGACAAGCGCAGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	119766773	119749325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_119750108_119755894_119756022_119766716
ES.26970.2	chr5	-	3291	1	NIC	ENSMUSG00000087516.8	novel	1008	3	NA	NA	12115	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGGATTGGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	119753255	119749964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_119750000_119753300
ES.26971.1	chr5	+	1578	1	NIC	ENSMUSG00000085345.2	novel	464	2	NA	NA	11549	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACAATTCTTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	119795747	119797325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119795700_119797300
ES.26972.1	chr5	+	4823	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-9961	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.395086215802	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTAATGATTTCTTC	2102	False	NA	30	True	AATAAA	-24	NA	119798772	119822797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119798947_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.11	chr5	+	4112	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-853	-551	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	344.649600230111	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTAATTATTTGAT	NA	False	NA	26	True	AATAAA	-26	NA	119807880	119822075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.12	chr5	+	4253	10	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-767	-549	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	367.719935028391	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAATTATTTGATAT	NA	False	NA	28	True	AATAAA	-28	NA	119807966	119822077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119808957_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.13	chr5	+	4958	10	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-759	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	367.719935028391	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119807974	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119808957_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.14	chr5	+	3416	10	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-733	-1352	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	367.719935028391	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCCTGTCCCTTTCAG	NA	False	NA	17	True	AATAAA	-26	NA	119808000	119821274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119808957_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.15	chr5	+	3257	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-671	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.395086215802	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGTATTTATGTAATT	NA	False	NA	19	True	AATAAA	-19	NA	119808062	119822068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119810023_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.16	chr5	+	5261	9	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-433	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.861293083408	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119808300	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808815_119808957_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.17	chr5	+	5490	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	-340	-168	-340	5	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTGGTAATGATTTC	NA	False	NA	27	True	AATAAA	-21	NA	119808393	119822794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.18	chr5	+	4505	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	-362	713	-13	-550	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGTAATTATTTGATA	NA	False	NA	27	True	AATAAA	-27	NA	119808720	119822076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.19	chr5	+	5215	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	-351	-8	-2	8	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGTAATGATTTCTTC	NA	False	NA	30	True	AATAAA	-24	NA	119808731	119822797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.2	chr5	+	1522	1	Intergenic	novelGene_22476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAGAAAAAAGA	2153	False	NA	NA	False	NA	NA	NA	119798823	119800345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119798800_119800300
ES.26972.20	chr5	+	4429	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	4	549	4	-549	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAATTATTTGATAT	NA	False	NA	28	True	AATAAA	-28	NA	119808737	119822077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.21	chr5	+	3995	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	4	-560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	338.395086215802	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAAAGTATTTATGTAA	NA	False	NA	17	True	AATAAA	-17	NA	119808737	119822066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808815_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.22	chr5	+	4246	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	-181	712	12	-549	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAATTATTTGATAT	NA	False	NA	28	True	AATAAA	-28	NA	119808745	119822077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.23	chr5	+	4071	9	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	35	-558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.861293083408	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGTATTTATGTAATT	NA	False	NA	19	True	AATAAA	-19	NA	119808768	119822068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808815_119808957_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.24	chr5	+	4807	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	-31	1	-31	-1	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119808895	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.25	chr5	+	4864	9	NIC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-30	-3	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGAAGTTGTGGTA	NA	False	NA	19	True	AATAAA	-13	NA	119808896	119822786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.26	chr5	+	4145	9	NIC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-30	-559	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAGTATTTATGTAAT	NA	False	NA	18	True	AATAAA	-18	NA	119808896	119822067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.27	chr5	+	6018	7	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	72	-555	intron_retention	FALSE	canonical	3	443	junction_2	248.575944129757	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTTATGTAATTATT	NA	False	NA	22	True	AATAAA	-22	NA	119808998	119822071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.28	chr5	+	4899	7	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	74	0	intron_retention	FALSE	non_canonical	0	0	junction_5	355.081993660932	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809000	119822789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818438_119819131_119820695
ES.26972.29	chr5	+	3166	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	94	1517	-62	-1354	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGCCCTGTCCCTTTC	NA	False	NA	15	True	AATAAA	-24	NA	119809020	119821272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.3	chr5	+	4224	10	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	-2414	-551	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	401.40392513167	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTAATTATTTGAT	9649	False	NA	26	True	AATAAA	-26	NA	119806319	119822075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119806456_119808957_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816749_119816898_119818459_119819131_119820695
ES.26972.30	chr5	+	3387	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	-42	1511	-42	-1348	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCCCTTTCAGTTTT	NA	False	NA	21	True	AATAAA	-30	NA	119809040	119821278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.31	chr5	+	3308	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	324	1350	-25	-1350	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCTGTCCCTTTCAGTT	NA	False	NA	19	True	AATAAA	-28	NA	119809057	119821276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.32	chr5	+	1719	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	-1	10368	-1	693	5prime_fragment	FALSE	canonical	3	797	junction_1	0	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGGCCCAGACTCCTC	NA	False	NA	NA	False	AATAAA	-36	NA	119809081	119812421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119810470_119812090
ES.26972.33	chr5	+	2669	1	FSM	ENSMUSG00000018604.19	ENSMUST00000202034.2	2995	1	349	-23	0	23	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGAATCCATCCCTCT	NA	False	NA	NA	False	AATACA	-30	NA	119809082	119811751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119809100_119811800
ES.26972.34	chr5	+	4557	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_7	347.327287868315	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119809082	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695_119822241_119822480
ES.26972.35	chr5	+	4775	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	359.099440494225	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809083	119822789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812170_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.37	chr5	+	4689	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	347.327287868315	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695_119821627_119821730
ES.26972.4	chr5	+	4029	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-2381	-552	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	337.632566557197	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGTAATTATTTGA	9682	False	NA	25	True	AATAAA	-25	NA	119806352	119822074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119806456_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.41	chr5	+	2865	3	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	398.5	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119821576
ES.26972.42	chr5	+	3752	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	351	879	2	-879	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTTTTTAAATATTG	NA	False	NA	NA	False	ATTAAA	-21	NA	119809084	119821747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.44	chr5	+	4520	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	347.327287868315	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809084	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695_119822209_119822481
ES.26972.45	chr5	+	4482	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_8	338.395086215802	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809084	119822789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695_119821148_119821519
ES.26972.46	chr5	+	4585	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	338.395086215802	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGAAGTTGTGGTAA	NA	False	NA	20	True	AATAAA	-14	NA	119809084	119822787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695_119822226_119822492
ES.26972.47	chr5	+	3638	9	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-878	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	314.870608345714	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTTTAAATATTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	119809084	119821748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.49	chr5	+	4047	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	2	-564	intron_retention	FALSE	canonical	0	0	junction_1	359.099440494225	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGGACAAAGTATTTAT	NA	False	NA	13	True	AATAAA	-13	NA	119809084	119822062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812170_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.5	chr5	+	5551	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-1517	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	336.111123737373	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119807216	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.50	chr5	+	4084	7	NNC	ENSMUSG00000018604.19	novel	4982	7	NA	NA	3	-552	intron_retention	FALSE	non_canonical	0	0	junction_4	367.081015883718	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGTAATTATTTGA	NA	False	NA	25	True	AATAAA	-25	NA	119809085	119822074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816739_119816898_119818459_119819131_119820695
ES.26972.51	chr5	+	4524	6	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_1	390.047894495022	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119809087	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119810470_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.52	chr5	+	4609	8	NNC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	387.021488619251	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119809087	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818465_119819131_119820695
ES.26972.53	chr5	+	4314	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	354	314	5	-314	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTTTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	119809087	119822312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.54	chr5	+	5106	7	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	443	junction_2	201.657024562884	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809087	119822789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119810470_119812090_119812359_119813307_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.58	chr5	+	3795	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	12	1049	12	-886	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTTGTTTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	119809094	119821740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.59	chr5	+	4508	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	20	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	338.395086215802	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTGAAGTTGTGGTA	NA	False	NA	19	True	AATAAA	-13	NA	119809102	119822786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119809397_119809721_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.6	chr5	+	4418	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-1097	-549	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	336.111123737373	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAATTATTTGATAT	NA	False	NA	28	True	AATAAA	-28	NA	119807636	119822077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.60	chr5	+	4359	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	20	477	20	-314	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTTTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	119809102	119822312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.61	chr5	+	807	1	FSM	ENSMUSG00000018604.19	ENSMUST00000202034.2	2995	1	390	1798	41	-1798	mono-exon	FALSE	NA	NA	NA	NA	NA	1116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAAACGCTTTATTTGT	NA	False	NA	NA	False	TTTAAA	-40	NA	119809123	119809930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119809100_119809900
ES.26972.62	chr5	+	2665	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	557	1634	557	-1471	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAGAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	119809639	119821155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.63	chr5	+	4466	6	NIC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-2190	-560	intron_retention	FALSE	canonical	3	453	junction_1	216.05314161104	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAAAGTATTTATGTAA	NA	False	NA	17	True	AATAAA	-17	NA	119811319	119822066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.64	chr5	+	4418	4	NIC	ENSMUSG00000018604.19	novel	4982	7	NA	NA	-89	-558	intron_retention	FALSE	canonical	3	900	junction_1	72.0385699160912	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGTATTTATGTAATT	NA	False	NA	19	True	AATAAA	-19	NA	119813420	119822068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.65	chr5	+	4245	4	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	5231	1	804	-1	3prime_fragment	FALSE	canonical	3	900	junction_1	72.0385699160912	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119814313	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.66	chr5	+	3616	5	NNC	ENSMUSG00000018604.19	novel	4982	7	NA	NA	808	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	433.912649619713	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119814317	119822789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119814940_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.67	chr5	+	2918	3	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	7661	1	-1570	-1	3prime_fragment	FALSE	canonical	3	999	junction_1	38.5	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119816743	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119816898_119818459_119819131_119820695
ES.26972.68	chr5	+	2925	3	NIC	ENSMUSG00000018604.19	novel	485	2	NA	NA	-112	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	538	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119818201	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119818361_119818459_119819131_119820695
ES.26972.69	chr5	+	2936	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9207	-1	-24	1	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTTGTGGTAATGA	NA	False	NA	23	True	AATAAA	-17	NA	119818289	119822790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119819131_119820695
ES.26972.7	chr5	+	3487	9	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-981	-1364	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	336.111123737373	1399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGGTGACCCCCGCCC	NA	False	NA	5	True	AATAAA	-14	NA	119807752	119821262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.70	chr5	+	2213	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9211	718	-20	-555	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATTTATGTAATTATT	NA	False	NA	22	True	AATAAA	-22	NA	119818293	119822071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119819131_119820695
ES.26972.72	chr5	+	1349	2	ISM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	9268	1525	37	-1362	3prime_fragment	FALSE	canonical	3	1076	junction_1	0	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGTGACCCCCGCCCTG	NA	False	NA	7	True	AATAAA	-16	NA	119818350	119821264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_119819131_119820695
ES.26972.73	chr5	+	4132	1	NIC	ENSMUSG00000018604.19	novel	4777	8	NA	NA	343	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAGTTGTGGTAAT	NA	False	NA	21	True	AATAAA	-15	NA	119818656	119822788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_119818700_119822800
ES.26972.8	chr5	+	4878	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-903	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	344.649600230111	1451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGTTGTGGTAATGAT	NA	False	NA	24	True	AATAAA	-18	NA	119807830	119822791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26972.9	chr5	+	3917	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	-872	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	347.327287868315	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGTAATTATTTGATA	NA	False	NA	27	True	AATAAA	-27	NA	119807861	119822076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_119808126_119809512_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ES.26973.1	chr5	-	131	1	Intergenic	novelGene_22477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAACAAAACAAA	2354	False	NA	NA	False	NA	NA	NA	119805304	119805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119805200_119805300
ES.26974.1	chr5	-	735	1	Antisense	novelGene_ENSMUSG00000018604.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCGGCTCGCTCCTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	119808905	119808170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_119808200_119808900
ES.26975.1	chr5	-	3590	7	NNC	ENSMUSG00000087516.8	novel	282	3	NA	NA	-12281	-53247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAAGAAGGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	119821711	119809212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_119810468_119812088_119812359_119813620_119813768_119815563_119815641_119816743_119816895_119818456_119819126_119820690
ES.26975.2	chr5	-	3047	1	Genic_Genomic	ENSMUSG00000087516.8	novel	NA	NA	NA	NA	-2829	-53247	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAAGAAGGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	119812259	119809212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_119809200_119812300
ES.26975.3	chr5	-	3648	8	NNC	ENSMUSG00000087516.8	novel	282	3	NA	NA	-12281	-53247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAAGAAGGAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	119821711	119809212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_119810468_119812088_119812359_119813307_119813366_119813620_119813768_119815563_119815641_119816743_119816895_119818456_119819126_119820690
ES.26975.4	chr5	-	2403	7	Antisense	novelGene_ENSMUSG00000018604.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATTTAAGCCCCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	119820800	119809487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_119810468_119812088_119812359_119813620_119813768_119815563_119815640_119816743_119816895_119818456_119819126_119820690
ES.26975.5	chr5	-	3373	8	Antisense	novelGene_ENSMUSG00000018604.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATTTAAGCCCCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	119821711	119809487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_119810468_119812088_119812359_119813307_119813366_119813620_119813768_119815563_119815641_119816743_119816895_119818456_119819126_119820690
ES.26976.1	chr5	-	1564	3	NNC	ENSMUSG00000086847.2	novel	1345	3	NA	NA	-19071	392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCAGTGATGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	119848354	119822767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_119824120_119845949_119846094_119848286
ES.26976.2	chr5	-	1016	3	FSM	ENSMUSG00000086847.2	ENSMUST00000135385.2	1345	3	34	295	34	-295	multi-exon	FALSE	canonical	2	3	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATAGGTTGCCTAAC	2737	False	NA	NA	False	GATAAA	-10	NA	119829249	119823454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_119824120_119826288_119826463_119829072
ES.26976.3	chr5	-	4717	1	NIC	ENSMUSG00000086847.2	novel	1345	3	NA	NA	76	-1331	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAACCCAGGCGCCGG	2779	False	NA	NA	False	NA	NA	NA	119829207	119824490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_119824500_119829200
ES.26976.4	chr5	-	224	1	Intergenic	novelGene_22478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAATTTAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	119847860	119847636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119847600_119847900
ES.26977.1	chr5	-	205	1	Intergenic	novelGene_22479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCCATGACCAACCCCAA	NA	False	NA	NA	False	NA	NA	NA	119869882	119869677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119869700_119869900
ES.26978.1	chr5	+	503	1	Intergenic	novelGene_22480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTAAGCCACTG	1002	False	NA	NA	False	NA	NA	NA	119872495	119872998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_119872500_119873000
ES.26979.1	chr5	-	157	1	Intergenic	novelGene_22481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATAAATACTTTTT	NA	False	NA	NA	False	NA	NA	NA	119874981	119874824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119874800_119875000
ES.2698.1	chr10	+	2451	9	FSM	ENSMUSG00000044770.15	ENSMUST00000063063.14	4885	9	369	2065	-54	-6	multi-exon	FALSE	canonical	0	0	junction_1	1.11102430216445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCATGGCTGCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	42736734	42834711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42736850_42783712_42783792_42788012_42788228_42800049_42800180_42806399_42806601_42810948_42811144_42822864_42823138_42831884_42832031_42833614
ES.2698.2	chr10	+	3904	5	ISM	ENSMUSG00000044770.15	ENSMUST00000105494.8	4166	7	69697	-15	-3848	13	3prime_fragment	FALSE	canonical	0	0	junction_1	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCGCCACTTTCTGAAAC	NA	False	NA	NA	False	NA	NA	NA	42806485	42836789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_42806601_42810948_42811144_42822864_42823138_42831884_42832031_42833614
ES.2698.3	chr10	+	3907	4	NNC	ENSMUSG00000044770.15	novel	2381	4	NA	NA	-84	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTCGCCA	4201	False	NA	NA	False	NA	NA	NA	42810827	42836778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_42811144_42822864_42823138_42831884_42832039_42833614
ES.2698.4	chr10	+	3792	4	FSM	ENSMUSG00000044770.15	ENSMUST00000130511.8	2381	4	612	-2023	34	13	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCGCCACTTTCTGAAAC	4319	False	NA	NA	False	NA	NA	NA	42810945	42836789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_42811144_42822864_42823138_42831884_42832031_42833614
ES.26980.1	chr5	-	148	1	Intergenic	novelGene_22482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	119900884	119900736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_119900700_119900900
ES.26981.1	chr5	+	176	1	Intergenic	novelGene_22483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATCTATATAAATTA	NA	False	NA	NA	False	NA	NA	NA	120253550	120253726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120253600_120253700
ES.26982.1	chr5	+	2806	22	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	16	25666	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	25.7392295243649	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTTGTTTGATCTG	NA	False	NA	NA	False	AATAGA	-15	NA	120254545	120284024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120283885
ES.26982.10	chr5	+	4353	25	Fusion	ENSMUSG00000106915.2_ENSMUSG00000029594.13	novel	4010	24	NA	NA	-24	-2	multi-exon	FALSE	canonical	0	0	junction_23	32.0662292069953	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAACAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	120254557	120394454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120392867_120393073_120393188
ES.26982.11	chr5	+	3664	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	28	318	-24	-308	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTGGCTGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	120254557	120336728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.12	chr5	+	3967	24	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	25.3407030039314	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCCTGATGTCACTCT	NA	False	NA	16	True	AATAAA	-26	NA	120254561	120337041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278274_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.13	chr5	+	4832	24	Fusion	ENSMUSG00000106915.2_ENSMUSG00000029594.13	novel	4010	24	NA	NA	-5	703	multi-exon	FALSE	non_canonical	0	0	junction_6	38.4092478624752	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCTGACAGCCTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	120254576	120395159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261217_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269320_120270206_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120393188
ES.26982.14	chr5	+	5411	24	Fusion	ENSMUSG00000106915.2_ENSMUSG00000029594.13	novel	4010	24	NA	NA	-2	1306	multi-exon	FALSE	non_canonical	0	0	junction_21	32.7550916690176	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATGTCTTTTCTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	120254579	120395762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282156_120313923_120314030_120324282_120324404_120393188
ES.26982.15	chr5	+	3824	23	ISM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	2194	2	63	0	3prime_fragment	FALSE	canonical	3	93	junction_15	11.8034873681293	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGATGTCACTCTGTC	NA	False	NA	19	True	AATAAA	-29	NA	120256723	120337044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.16	chr5	+	3280	19	ISM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	6427	2	4296	0	3prime_fragment	FALSE	canonical	3	93	junction_11	11.513277359447	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGATGTCACTCTGTC	NA	False	NA	19	True	AATAAA	-29	NA	120260956	120337044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.17	chr5	+	1995	9	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	-17304	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.1278494453576	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTCCCTCTACCCTGAT	NA	False	NA	8	True	AATAAA	-18	NA	120277571	120337033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120277769_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.18	chr5	+	1737	1	Genic_Genomic	ENSMUSG00000029594.13	novel	NA	NA	NA	NA	23069	1549	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGCTCACATCAGGT	NA	False	NA	NA	False	NA	NA	NA	120336858	120338595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_120336900_120338600
ES.26982.19	chr5	+	4374	2	Intergenic	novelGene_22489	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120355453	120359892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120357917_120357981
ES.26982.2	chr5	+	3990	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	20	0	20	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254549	120337046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26982.3	chr5	+	3184	24	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	22	19015	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_23	24.1296122068963	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTTTCCCTTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	120254551	120356061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120355765
ES.26982.4	chr5	+	3955	24	NNC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	33.1737705849127	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCCCCTCCCTCTAC	NA	False	NA	2	True	AATAAA	-12	NA	120254551	120337027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279618_120279696_120281441_120281498_120282061_120282179_120313923_120314019_120324282_120324404_120335946
ES.26982.5	chr5	+	505	2	FSM	ENSMUSG00000029594.13	ENSMUST00000202388.2	455	2	-30	-20	22	20	multi-exon	FALSE	canonical	3	113	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTACGTTGTTTGAC	NA	False	NA	NA	False	ATTAAA	-18	NA	120254551	120257066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120254715_120256724
ES.26982.7	chr5	+	4189	24	Fusion	ENSMUSG00000106915.2_ENSMUSG00000029594.13	novel	4010	24	NA	NA	23	34	multi-exon	FALSE	canonical	0	0	junction_23	24.68562258062	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATCCCCGATCCATATC	NA	False	NA	NA	False	AATAAA	-21	NA	120254552	120394490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120393188
ES.26982.8	chr5	+	4809	25	Fusion	ENSMUSG00000106915.2_ENSMUSG00000029594.13	novel	4010	24	NA	NA	24	702	multi-exon	FALSE	non_canonical	0	0	junction_23	32.0662292069953	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCCTGACAGCCTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	120254553	120395158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120393188_120394983_120395029
ES.26982.9	chr5	+	3883	23	NIC	ENSMUSG00000029594.13	novel	4010	24	NA	NA	26	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	25.7123712064417	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTGCCCCTCCCTCTA	NA	False	NA	1	True	AATAAA	-11	NA	120254555	120337026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ES.26983.1	chr5	-	5237	1	Intergenic	novelGene_22484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGAGGCACCACAGGC	NA	False	NA	NA	False	NA	NA	NA	120289075	120283838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120283800_120289100
ES.26984.1	chr5	-	301	1	Intergenic	novelGene_22485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGCACACACA	NA	False	NA	NA	False	NA	NA	NA	120352280	120351979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120352000_120352300
ES.26984.2	chr5	-	199	1	Intergenic	novelGene_22486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCAATTCTG	NA	False	NA	NA	False	NA	NA	NA	120352279	120352080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120352100_120352300
ES.26985.1	chr5	-	4275	6	Intergenic	novelGene_22487	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAATATGACCCAGA	NA	False	NA	NA	False	AATAAA	-21	NA	120373403	120352376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120355871_120357425_120357668_120358342_120358498_120372347_120372392_120372485_120372730_120373307
ES.26985.2	chr5	-	185	1	Intergenic	novelGene_22488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120354262	120354077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120354100_120354300
ES.26986.1	chr5	-	233	1	Intergenic	novelGene_22490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGATTGGGTGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	120379375	120379142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120379100_120379400
ES.26987.1	chr5	+	181	1	Intergenic	novelGene_22491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTACTTATTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	120413449	120413630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120413400_120413600
ES.26988.1	chr5	-	1002	1	NIC	ENSMUSG00000029596.14	novel	1225	8	NA	NA	8158	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGCTCCCTGGGTTCT	9713	False	NA	NA	False	AATAAA	-16	NA	120597267	120596265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120596300_120597300
ES.26988.2	chr5	-	507	2	NNC	ENSMUSG00000029596.14	novel	1225	8	NA	NA	8144	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGCTCCCTGGGTTCT	9699	False	NA	NA	False	AATAAA	-16	NA	120597281	120596265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120596617_120597125
ES.26989.1	chr5	+	4588	3	Antisense	novelGene_ENSMUSG00000029598.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGCTATATAGGCCAG	1480	False	NA	NA	False	NA	NA	NA	120623088	120628044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_120623899_120624095_120625567_120625737
ES.26989.2	chr5	+	1735	3	Antisense	novelGene_ENSMUSG00000029598.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGCTATATAGGCCAG	3889	False	NA	NA	False	NA	NA	NA	120625497	120628044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_120625566_120625735_120625831_120626472
ES.2699.1	chr10	+	172	1	Intergenic	novelGene_2057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAATGAATATG	NA	False	NA	NA	False	NA	NA	NA	42842632	42842804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42842600_42842800
ES.26990.1	chr5	-	3599	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	2	607	2	-607	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACATTATAAACACAGG	NA	False	NA	4	True	NA	NA	NA	120641688	120621953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.10	chr5	-	6523	8	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	1	491	intron_retention	FALSE	canonical	3	258	junction_1	61.295537008357	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGGTTATTGTATCT	NA	False	NA	-1	True	NA	NA	NA	120641665	120622820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120624866_120625494_120625567_120625736_120629289_120630729_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.11	chr5	-	2878	11	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	1	488	intron_retention	FALSE	canonical	3	256	junction_2	60.0174141395645	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCCTCTGGTTATTGTA	NA	False	NA	-4	True	NA	NA	NA	120641665	120622823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.12	chr5	-	3520	10	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	1	488	intron_retention	FALSE	canonical	3	256	junction_2	62.9779502859709	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCCTCTGGTTATTGTA	NA	False	NA	-4	True	NA	NA	NA	120641665	120622823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120626636_120629190_120629289_120630729_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.13	chr5	-	2787	12	NNC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	-4	486	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	114.729217675489	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCATCCTCTGGTTATTG	NA	False	NA	-6	True	NA	NA	NA	120641681	120622825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120631012_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.14	chr5	-	2714	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	14	1480	1	485	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATCCTCTGGTTATT	NA	False	NA	-7	True	NA	NA	NA	120641676	120622826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.15	chr5	-	2416	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	6	1786	6	179	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCCATGGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	120641684	120623132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.16	chr5	-	2253	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	-5	1960	-5	5	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTTGAGTCTTCTTTC	NA	False	NA	0	True	NA	NA	NA	120641695	120623306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.17	chr5	-	2405	11	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	2	5	intron_retention	FALSE	canonical	3	256	junction_2	60.0174141395645	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTTGAGTCTTCTTTC	NA	False	NA	0	True	NA	NA	NA	120641675	120623306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.20	chr5	-	2763	10	NNC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_6	158.432600461171	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGAGGGCCTTGAGTCT	NA	False	NA	-6	True	NA	NA	NA	120641665	120623312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120623904_120624712_120624866_120625494_120625567_120625736_120626636_120629190_120629289_120630729_120631012_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.22	chr5	-	3304	10	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	258	junction_1	50.5173237612604	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGAGGGCCTTGAGTC	NA	False	NA	-7	True	NA	NA	NA	120641679	120623313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.23	chr5	-	2062	11	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	116.342769435836	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGAGGGCCTTGAGTC	NA	False	NA	-7	True	NA	NA	NA	120641674	120623313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.26	chr5	-	1439	9	FSM	ENSMUSG00000029598.13	ENSMUST00000151361.2	1453	9	14	0	3	0	multi-exon	FALSE	canonical	3	326	junction_4	35.3685948264841	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGTCTTGTGACCTTCA	NA	False	NA	NA	False	NA	NA	NA	120641663	120625363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.27	chr5	-	1309	9	FSM	ENSMUSG00000029598.13	ENSMUST00000151361.2	1453	9	12	132	1	-132	multi-exon	FALSE	canonical	3	326	junction_4	35.3685948264841	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATGTGGCCTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120641665	120625495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.3	chr5	-	5301	9	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	-2	-612	intron_retention	FALSE	canonical	3	258	junction_1	53.5815674929355	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTGCACATTATAAAC	NA	False	NA	-1	True	NA	NA	NA	120641679	120621958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120625567_120625736_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.4	chr5	-	3415	11	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	1	-616	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	116.342769435836	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAAAGTGCACATTAT	NA	False	NA	-5	True	NA	NA	NA	120641676	120621962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.5	chr5	-	4215	11	NIC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	4	-618	intron_retention	FALSE	canonical	3	256	junction_2	60.04664853262	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGGAAAAGTGCACATT	NA	False	NA	-7	True	NA	NA	NA	120641673	120621964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.7	chr5	-	3652	13	NNC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	-2	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	140.800094696938	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATTTATTTTTTA	NA	False	NA	-30	True	NA	NA	NA	120641679	120621987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626177_120626274_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.8	chr5	-	3693	12	NNC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	2	-641	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	114.768037707974	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATTTATTTTTTA	NA	False	NA	-30	True	NA	NA	NA	120641675	120621987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625974_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26990.9	chr5	-	2830	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	0	1378	0	587	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCTCTCTGTCCATTT	NA	False	NA	95	True	NA	NA	NA	120641690	120622724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ES.26991.10	chr5	+	3511	15	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	65.4675492133316	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	16	True	NA	5	True	AATAAA	-21	NA	120649252	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657744_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120669214_120670924
ES.26991.11	chr5	+	4192	11	NNC	ENSMUSG00000032754.15	novel	2775	15	NA	NA	23	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	61.9567591147245	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	19	True	NA	5	True	AATAAA	-21	NA	120649255	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658847_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145
ES.26991.12	chr5	+	2726	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	-60	-5	24	1	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTCCCACAGGGTC	20	True	NA	7	True	AATAAA	-23	NA	120649256	120672090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ES.26991.13	chr5	+	4812	15	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	24	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	54.2845864544496	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	20	True	NA	5	True	AATAAA	-21	NA	120649256	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658846_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.14	chr5	+	1093	5	NNC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	24	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	79.3930097678631	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTCCCACAGGGTC	20	True	NA	7	True	AATAAA	-23	NA	120649256	120672090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120658390_120671914
ES.26991.15	chr5	+	6718	11	NIC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	24	-2	intron_retention	FALSE	canonical	3	93	junction_9	43.8202008210825	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTACCAGAAGAGTCCC	20	True	NA	-1	True	AATAAA	-15	NA	120649256	120672082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574
ES.26991.16	chr5	+	2857	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.5084702897938	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	20	True	NA	4	True	AATAAA	-20	NA	120649256	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658860_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.17	chr5	+	2205	14	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	24	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	64.8899842747061	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGAAGAGTCCCACAG	20	True	NA	3	True	AATAAA	-19	NA	120649256	120672086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924_120671144_120671476
ES.26991.18	chr5	+	2954	15	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.3119024660858	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGAAGAGTCCCACAG	20	True	NA	3	True	AATAAA	-19	NA	120649256	120672086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120656626_120656859_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ES.26991.2	chr5	+	2747	14	NNC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.8325298079572	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGAAGAGTCCCACAG	-11	True	NA	3	True	AATAAA	-19	NA	120649225	120672086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659038_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ES.26991.20	chr5	+	2633	14	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	78.625545030613	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	20	True	NA	5	True	AATAAA	-21	NA	120649256	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120669797_120669891_120670924
ES.26991.21	chr5	+	2810	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.325077190436	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGAAGAGTCCCACAG	31	False	NA	3	True	AATAAA	-19	NA	120649267	120672086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657744_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.22	chr5	+	3667	14	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-32	0	intron_retention	FALSE	canonical	3	93	junction_9	39.8119841610568	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	31	False	NA	6	True	AATAAA	-22	NA	120649267	120672089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.24	chr5	+	3102	17	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.6797354267827	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	41	False	NA	4	True	AATAAA	-20	NA	120649277	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120656626_120656878_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.25	chr5	+	2952	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.1098494933617	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACCAGAAGAGTCCCAC	42	False	NA	1	True	AATAAA	-17	NA	120649278	120672084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120656618_120656878_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120668380_120668462_120669145_120669214_120670924
ES.26991.26	chr5	+	3080	17	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.2392261591183	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTCCCACAGGGTC	51	False	NA	7	True	AATAAA	-23	NA	120649287	120672090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120656622_120656859_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.28	chr5	+	4817	13	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.0977568376861	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	54	False	NA	4	True	AATAAA	-20	NA	120649290	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120661798_120665364_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.29	chr5	+	3150	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.5303308202085	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	1722	False	NA	6	True	AATAAA	-22	NA	120651063	120672089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120656630_120656878_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.3	chr5	+	2500	14	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.9226348349677	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGAGTCCCACAGGGTC	-10	True	NA	7	True	AATAAA	-23	NA	120649226	120672090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649310_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.30	chr5	+	2411	12	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	73.2708098102371	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	1829	False	NA	4	True	AATAAA	-20	NA	120651170	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120657744_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.31	chr5	+	2785	15	ISM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	1948	1	-27	-1	3prime_fragment	FALSE	non_canonical	0	0	junction_4	56.2808192215154	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	1839	False	NA	5	True	AATAAA	-21	NA	120651180	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.32	chr5	+	2299	10	NNC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.3054684617718	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	1843	False	NA	4	True	AATAAA	-20	NA	120651184	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658844_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120670924
ES.26991.33	chr5	+	3000	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.6456850442995	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	1843	False	NA	5	True	AATAAA	-21	NA	120651184	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120656658_120656878_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.34	chr5	+	2609	14	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.6595235747729	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	1859	False	NA	4	True	AATAAA	-20	NA	120651200	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658846_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120668380_120668462_120669145_120669214_120670924
ES.26991.35	chr5	+	3442	9	NNC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	93.3123116207074	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAAGAGTCCCACAGG	1875	False	NA	4	True	AATAAA	-20	NA	120651216	120672087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120661798_120665364_120665938_120671916
ES.26991.36	chr5	+	2369	10	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	77.7171192034545	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	1881	False	NA	5	True	AATAAA	-21	NA	120651222	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120659201_120659818_120659927_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.37	chr5	+	165	1	Intergenic	novelGene_22492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATAAAAAGGCT	2486	False	NA	NA	False	NA	NA	NA	120651827	120651992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120651800_120652000
ES.26991.38	chr5	+	177	1	Intergenic	novelGene_22493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	1053	False	NA	11	True	NA	NA	NA	120656440	120656617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120656400_120656600
ES.26991.39	chr5	+	2199	10	ISM	ENSMUSG00000032754.15	ENSMUST00000111890.9	2775	15	9732	-4	188	-1	3prime_fragment	FALSE	canonical	3	93	junction_5	41.9126074906664	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	3644	False	NA	5	True	AATAAA	-21	NA	120659031	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.4	chr5	+	2901	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	8	-11	8	11	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGGTCTCGTCAGTTC	4	True	NA	17	True	AATAAA	-33	NA	120649240	120672100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.5	chr5	+	2555	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	12	2	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGTCCCACAGGGTCT	8	True	NA	8	True	AATAAA	-24	NA	120649244	120672091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.6	chr5	+	3676	13	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	71.5574749570038	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	8	True	NA	6	True	AATAAA	-22	NA	120649244	120672089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120669801
ES.26991.7	chr5	+	2545	13	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.4403633343171	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAAGAGTCCCACAGGG	9	True	NA	5	True	AATAAA	-21	NA	120649245	120672088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659038_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ES.26991.8	chr5	+	4218	14	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	13	1	intron_retention	FALSE	non_canonical	0	0	junction_5	57.1718058540692	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCAGAAGAGTCCCACAG	9	True	NA	3	True	AATAAA	-19	NA	120649245	120672086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120669214_120670924
ES.26992.1	chr5	+	178	1	Intergenic	novelGene_22494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTACATGGAT	4221	False	NA	NA	False	NA	NA	NA	120682793	120682971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120682800_120683000
ES.26993.1	chr5	+	1452	1	Intergenic	novelGene_22495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120696368	120697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120696400_120697800
ES.26994.1	chr5	-	4635	29	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	28	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.27545835385914	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCTGCAGCCTTTGAT	9211	False	NA	-2	True	AATAAA	-19	NA	120726710	120672220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120672415_120672460_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ES.26994.10	chr5	-	2437	1	FSM	ENSMUSG00000106825.2	ENSMUST00000201971.2	985	1	75	-1527	75	1527	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGAGTGT	3567	False	NA	NA	False	NA	NA	NA	120691029	120688592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120688600_120691000
ES.26994.11	chr5	-	1596	11	Fusion	ENSMUSG00000032741.10_ENSMUSG00000106825.2	novel	2622	2	NA	NA	-27	0	multi-exon	FALSE	canonical	0	0	junction_1	8.83685464404615	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAAGTTCTGCCGTGGA	9217	False	NA	NA	False	NA	NA	NA	120726704	120690119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_120690502_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ES.26994.12	chr5	-	2702	2	FSM	ENSMUSG00000032741.10	ENSMUST00000202072.2	2622	2	-33	-47	-15	47	multi-exon	FALSE	canonical	3	17	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGCAGTCGGGCATTG	9229	False	NA	NA	False	AAAAAG	-11	NA	120726692	120720916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120723494_120726567
ES.26994.13	chr5	-	2733	2	NNC	ENSMUSG00000032741.10	novel	2622	2	NA	NA	30	47	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGCAGTCGGGCATTG	9213	False	NA	NA	False	AAAAAG	-11	NA	120726708	120720916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120723494_120726552
ES.26994.2	chr5	-	4678	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	30	4	30	-4	multi-exon	FALSE	canonical	2	12	junction_13	5.06365515872966	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGGCTGCAGCCTTTGA	9213	False	NA	-3	True	AATAAA	-18	NA	120726708	120672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ES.26994.3	chr5	-	4447	27	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	24896	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_26	5.69867107938385	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCGGCTGCAGCCTTTGA	9939	False	NA	-3	True	AATAAA	-18	NA	120701763	120672221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120701609
ES.26994.4	chr5	-	4688	28	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	6.25081613327105	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCGGCTGCAGCCTTTG	9217	False	NA	-4	True	AATAAA	-17	NA	120726704	120672222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726552
ES.26994.5	chr5	-	4690	30	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.96290448267702	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCGGCTGCAGCCTTT	9226	False	NA	-5	True	AATAAA	-16	NA	120726695	120672223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120672415_120672460_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120723592_120723666_120726567
ES.26994.6	chr5	-	4705	29	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.26959000050967	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCGGCTGCAGCCTTT	9195	False	NA	-5	True	AATAAA	-16	NA	120726726	120672223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120672415_120672460_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726510
ES.26994.7	chr5	-	2796	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	19	1897	19	-1897	multi-exon	FALSE	canonical	2	12	junction_13	5.06365515872966	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTATGGGAACCATGTGTG	9202	False	NA	NA	False	NA	NA	NA	120726719	120674114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ES.26994.8	chr5	-	1895	17	NNC	ENSMUSG00000032741.10	novel	4712	28	NA	NA	-21	2417	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	7.584678223234	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	9223	False	NA	NA	False	NA	NA	NA	120726698	120682978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726552
ES.26994.9	chr5	-	2033	14	NIC	ENSMUSG00000032741.10	novel	1705	15	NA	NA	-28	28	intron_retention	FALSE	canonical	2	12	junction_1	5.8177447388274	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTCTGAGATCGAGG	9216	False	NA	NA	False	NA	NA	NA	120726705	120685367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120685559_120685999_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ES.26995.1	chr5	+	3115	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	250	957	-138	8	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCCTCAGGATGT	NA	False	NA	35	True	AATAAA	-26	NA	120751053	120765700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.11	chr5	+	3944	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	124.927059050882	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAAGGTATTCCTCCT	NA	False	NA	13	True	GATAAA	-23	NA	120751172	120766654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761642_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.13	chr5	+	3285	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.557619387103	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751179	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756581_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.14	chr5	+	2847	19	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	173.801611039714	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751180	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758751_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764095_120764465_120764571_120764898_120765015_120765124
ES.26995.16	chr5	+	3188	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	377	757	-11	208	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCTCGTGTCTTCATTC	NA	False	NA	NA	False	NA	NA	NA	120751180	120765900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.17	chr5	+	2970	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	126.48963913643	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCAGGAGTGTGGCTTC	NA	False	NA	25	True	AATAAA	-16	NA	120751182	120765690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758542_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.19	chr5	+	4385	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	382	-445	-6	445	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGGAGCCTCTTCAT	NA	False	NA	NA	False	AATACA	-15	NA	120751185	120767102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.2	chr5	+	3009	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	126.662091087111	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751143	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764905_120765015_120765124
ES.26995.20	chr5	+	4036	18	NIC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	468	junction_5	36.7699290407379	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCAGGAGTGTGGCTTC	NA	False	NA	25	True	AATAAA	-16	NA	120751186	120765690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.21	chr5	+	3847	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	127.108978914849	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751188	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120760369_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.22	chr5	+	3290	19	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	3	0	intron_retention	FALSE	canonical	2	7	junction_11	128.596267441944	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	27	True	AATAAA	-18	NA	120751194	120765692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759887_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120765015_120765124
ES.26995.23	chr5	+	936	1	Intergenic	novelGene_22496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	120751583	120752519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120751600_120752500
ES.26995.24	chr5	+	2622	19	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-1887	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	130.122544331141	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGAGTGTGGCTTCCTC	966	False	NA	28	True	AATAAA	-19	NA	120755081	120765693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761746_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.25	chr5	+	2661	18	ISM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	5400	964	-765	1	3prime_fragment	FALSE	canonical	3	468	junction_3	35.0228793237302	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGAGTGTGGCTTCCTC	2088	False	NA	28	True	AATAAA	-19	NA	120756203	120765693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.26	chr5	+	2588	17	ISM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	5859	967	-306	-2	3prime_fragment	FALSE	canonical	3	468	junction_2	35.4962586056615	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCAGGAGTGTGGCTTC	2547	False	NA	25	True	AATAAA	-16	NA	120756662	120765690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.28	chr5	+	1896	10	ISM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	8874	966	286	-1	3prime_fragment	FALSE	canonical	3	471	junction_2	36.5117941371156	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	5562	False	NA	26	True	AATAAA	-17	NA	120759677	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.29	chr5	+	1510	4	NIC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	3991	-1	intron_retention	FALSE	canonical	3	562	junction_2	12.2292908852294	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	9267	False	NA	26	True	AATAAA	-17	NA	120763382	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.3	chr5	+	2990	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	124.927059050882	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGAGTGTGGCTTCCTC	NA	False	NA	28	True	AATAAA	-19	NA	120751165	120765693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761642_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.4	chr5	+	2983	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	127.101895999859	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGACCAGGAGTGTGGC	NA	False	NA	22	True	AATAAA	-13	NA	120751166	120765687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759685_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.5	chr5	+	2866	19	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	129.377677105957	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751169	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763900_120764465_120764571_120764898_120765015_120765124
ES.26995.6	chr5	+	3961	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	366	-5	-22	5	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTCCTCCTGCCTCAGT	NA	False	NA	21	True	GATAAA	-31	NA	120751169	120766662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.7	chr5	+	3952	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-21	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	126.935060937831	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCAAGGTATTCCTCCT	NA	False	NA	13	True	GATAAA	-23	NA	120751170	120766654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763916_120763996_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.8	chr5	+	3074	19	NIC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	468	junction_4	37.9085970248842	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCAGGAGTGTGGCTTC	NA	False	NA	25	True	AATAAA	-16	NA	120751171	120765690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26995.9	chr5	+	2981	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	126.755550289074	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGGAGTGTGGCTTCC	NA	False	NA	26	True	AATAAA	-17	NA	120751172	120765691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761868_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ES.26996.1	chr5	-	1468	4	NIC	ENSMUSG00000029600.11	novel	733	3	NA	NA	-1	465	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	34.4512538072113	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTCTGCTCTGCTCCA	6333	False	NA	NA	False	NA	NA	NA	120750636	120731904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120732685_120742274_120742313_120749442_120749795_120750338
ES.26996.10	chr5	-	3758	2	ISM	ENSMUSG00000029600.11	ENSMUST00000136070.8	870	3	-774	2020	-774	-4	5prime_fragment	FALSE	canonical	3	77	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5541	False	NA	NA	False	ATTAAA	-16	NA	120751428	120747126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_120749795_120750338
ES.26996.11	chr5	-	1729	3	NNC	ENSMUSG00000029600.11	novel	1573	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	6336	False	NA	NA	False	ATTAAA	-16	NA	120750633	120747126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120748209_120749442_120749795_120750338
ES.26996.2	chr5	-	2363	5	NNC	ENSMUSG00000029600.11	novel	733	3	NA	NA	-774	463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4114177412837	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTCTCTGCTCTGCTC	5541	False	NA	NA	False	NA	NA	NA	120751428	120731906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120732685_120732784_120732890_120742274_120742313_120749442_120749795_120750338
ES.26996.3	chr5	-	1218	3	NNC	ENSMUSG00000029600.11	novel	733	3	NA	NA	-1238	463	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTCTCTGCTCTGCTC	9606	False	NA	NA	False	NA	NA	NA	120745020	120731906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120732685_120742274_120742313_120744618
ES.26996.4	chr5	-	2590	5	NNC	ENSMUSG00000029600.11	novel	870	3	NA	NA	-777	3	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_3	26.5235744197497	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTCCTGATACTCTCC	5538	False	NA	0	True	NA	NA	NA	120751431	120740165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120740583_120742274_120742313_120744618_120745309_120749442_120749795_120750338
ES.26996.5	chr5	-	843	2	NNC	ENSMUSG00000029600.11	novel	650	3	NA	NA	-1266	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCAGTCCTGATACT	9578	False	NA	-4	True	NA	NA	NA	120745048	120740169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120740583_120744618
ES.26996.6	chr5	-	1099	4	NIC	ENSMUSG00000029600.11	novel	712	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	29.8923996285938	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCAGTCCTGATACT	6335	False	NA	-4	True	NA	NA	NA	120750634	120740169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120740583_120742274_120742313_120749442_120749795_120750338
ES.26996.7	chr5	-	2350	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-780	3	-780	-3	multi-exon	FALSE	canonical	3	77	junction_2	1.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGGTAGTGTGTTACTT	5535	False	NA	NA	False	ATTAAA	-17	NA	120751434	120747125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120748028_120749442_120749795_120750338
ES.26996.8	chr5	-	2438	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	-774	4	-774	-4	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5541	False	NA	NA	False	ATTAAA	-16	NA	120751428	120747126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
ES.26996.9	chr5	-	2887	2	ISM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	-774	4	-774	-4	intron_retention	FALSE	canonical	3	80	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGGTAGTGTGTTACT	5541	False	NA	NA	False	ATTAAA	-16	NA	120751428	120747126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_120748028_120749442
ES.26997.1	chr5	-	179	1	Intergenic	novelGene_22497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGCAATCAAATAATA	385	False	NA	NA	False	NA	NA	NA	120777261	120777082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120777100_120777300
ES.26998.1	chr5	+	3350	21	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	10.1600935035067	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCGTGACGTGTTAAAA	NA	False	NA	8	True	TATAAA	-18	NA	120787255	120817659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792875_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813344_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.10	chr5	+	2625	15	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	57	-6848	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	8.28940804365943	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTGGGGAGCAACA	NA	False	NA	NA	False	NA	NA	NA	120787309	120810523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800354_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605
ES.26998.11	chr5	+	3290	21	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	61	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.0193562667469	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTAGCCGTGACGTGTT	NA	False	NA	4	True	TATAAA	-14	NA	120787313	120817655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802758_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812576_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.13	chr5	+	3242	20	NIC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	156	-1	intron_retention	FALSE	canonical	3	12	junction_6	7.17490239492715	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	NA	False	NA	10	True	TATAAA	-20	NA	120787408	120817661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120787600_120790878_120790936_120792870_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.14	chr5	+	2800	17	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	169	2470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.3333123319679	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGGCTGGGGACTCTGCC	NA	False	NA	NA	False	NA	NA	NA	120787421	120820132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802758_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120811813_120812209_120819546
ES.26998.15	chr5	+	5487	21	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	180	2470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.87186564370764	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGGCTGGGGACTCTGCC	NA	False	NA	NA	False	NA	NA	NA	120787432	120820132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812685_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.16	chr5	+	5112	17	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	7874	0	3695	0	3prime_fragment	FALSE	canonical	3	12	junction_3	7.31009575860672	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120795126	120817662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.17	chr5	+	2496	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	12953	6	8774	-6	3prime_fragment	FALSE	canonical	3	12	junction_1	6.35393177328745	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGCCGTGACGTGTTA	NA	False	NA	5	True	TATAAA	-15	NA	120800205	120817656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.18	chr5	+	1930	9	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8801	-6877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.6858551365813	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120800232	120810494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802784_120802924_120804307_120804501_120808340_120808479_120809605
ES.26998.19	chr5	+	2443	15	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8810	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.6005871997542	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCCGTGACGTGTTAAA	NA	False	NA	7	True	TATAAA	-17	NA	120800241	120817658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120800354_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813815_120814852_120814974_120816687_120816759_120816986
ES.26998.2	chr5	+	3311	21	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.1985293057382	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGTGACGTGTTAAAAT	NA	False	NA	9	True	TATAAA	-19	NA	120787256	120817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792856_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802758_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.21	chr5	+	4844	14	NIC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	8817	2471	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.73949073029156	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGCTGGGGACTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	120800248	120820133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120800381_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.22	chr5	+	1697	7	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	14511	7168	10332	-6877	internal_fragment	FALSE	canonical	3	22	junction_2	5.01386965216377	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120801763	120810494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605
ES.26998.23	chr5	+	5979	7	NIC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	-9826	-9	intron_retention	FALSE	canonical	3	22	junction_3	4.31083905212585	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCTTAGCCGTGACGTG	NA	False	NA	2	True	TATAAA	-12	NA	120806831	120817653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120808479_120809605_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.24	chr5	+	2835	1	NIC	ENSMUSG00000029602.12	novel	3212	22	NA	NA	-8969	-6848	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTGGGGAGCAACA	NA	False	NA	NA	False	NA	NA	NA	120807688	120810523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_120807700_120810500
ES.26998.25	chr5	+	1627	2	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	20486	7170	-8919	-6879	internal_fragment	FALSE	canonical	3	33	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120807738	120810492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120808479_120809605
ES.26998.26	chr5	+	1300	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3777	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGTGACGTGTTAAAAT	-1	True	NA	9	True	TATAAA	-19	NA	120812880	120817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.3	chr5	+	3245	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	5	1	5	-1	multi-exon	FALSE	canonical	3	12	junction_7	7.30479294709987	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	NA	False	NA	10	True	TATAAA	-20	NA	120787257	120817661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.4	chr5	+	3397	22	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	9.91620218428594	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTAGCCGTGACGTGTT	NA	False	NA	4	True	TATAAA	-14	NA	120787258	120817655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120811736_120811896_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ES.26998.5	chr5	+	2690	15	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	19	7139	19	-6848	5prime_fragment	FALSE	canonical	3	12	junction_7	6.94291593155592	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTGGGGAGCAACA	NA	False	NA	NA	False	NA	NA	NA	120787271	120810523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605
ES.26998.8	chr5	+	1789	12	ISM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	41	14369	41	5578	5prime_fragment	FALSE	canonical	3	12	junction_7	4.83273958545528	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTCTTTCTTCCTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120787293	120803293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810
ES.26998.9	chr5	+	3173	21	NNC	ENSMUSG00000029602.12	novel	3251	21	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	9.01054937281851	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGTGACGTGTTAAAATC	NA	False	NA	10	True	TATAAA	-20	NA	120787298	120817661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813701_120813807_120814852_120814974_120816687_120816759_120816986
ES.26999.1	chr5	+	603	1	Antisense	novelGene_ENSMUSG00000029603.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAGCAATTAAA	NA	False	NA	NA	False	NA	NA	NA	120832810	120833413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_120832800_120833400
ES.27.1	chr1	+	177	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGAAATTTGCAG	NA	False	NA	NA	False	NA	NA	NA	5602124	5602301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_5602100_5602300
ES.270.1	chr1	+	233	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCATACCATGAATACATA	NA	False	NA	NA	False	ATTAAA	-16	NA	36344698	36344931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36344700_36344900
ES.2700.1	chr10	+	303	1	Intergenic	novelGene_2059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATAAGAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	42927857	42928160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_42927900_42928200
ES.27000.1	chr5	-	3886	1	Antisense	novelGene_ENSMUSG00000029602.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAGCAAAAAGCAACAGA	NA	False	NA	NA	False	NA	NA	NA	120798806	120794920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_120794900_120798800
ES.27001.2	chr5	-	3800	10	FSM	ENSMUSG00000029603.16	ENSMUST00000031607.7	4035	10	236	-1	236	1	multi-exon	FALSE	canonical	1	2	junction_8	46.8325095485741	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTTTTTCTGCCAAGA	NA	False	NA	-17	True	AATAAA	-17	NA	120849756	120818265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
ES.27001.3	chr5	-	3305	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	41.4123698307643	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTTTTTCTGCCAAG	NA	False	NA	-18	True	AATAAA	-16	NA	120834537	120818266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120833903
ES.27001.4	chr5	-	2782	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1096	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	41.4123698307643	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120834564	120818267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120834452
ES.27001.7	chr5	-	4077	9	NIC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	279	0	intron_retention	FALSE	canonical	1	2	junction_7	44.5152712560532	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120849713	120818267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
ES.27001.8	chr5	-	2665	10	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1088	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	46.8467425116263	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGCCTTTTTCTGCCA	NA	False	NA	-20	True	AATAAA	-14	NA	120834556	120818268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120832756_120832863_120833178_120834452
ES.27001.9	chr5	-	3755	10	NIC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	289	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	48.1756047070391	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGGCCTTTTTCTGCC	NA	False	NA	-21	True	AATAAA	-13	NA	120849703	120818269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820632_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
ES.27002.1	chr5	+	743	3	Antisense	novelGene_ENSMUSG00000032690.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACTAGTGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	120872028	120874525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_120872425_120873070_120873222_120874329
ES.27003.1	chr5	-	2132	3	FSM	ENSMUSG00000032690.17	ENSMUST00000147941.2	2373	3	361	-120	361	117	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTGGTCTTGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	120873279	120868280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120870024_120871478_120871633_120873044
ES.27003.2	chr5	-	3455	9	NNC	ENSMUSG00000032690.17	novel	3869	11	NA	NA	3812	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.85695682505013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGACTGTCCTGGAA	9053	False	NA	NA	False	NA	NA	NA	120884106	120868399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120870024_120871478_120871633_120873044_120873284_120874061_120874250_120876359_120876643_120876734_120876953_120879213_120879359_120881109_120881349_120883741
ES.27003.3	chr5	-	3375	9	ISM	ENSMUSG00000032690.17	ENSMUST00000053909.13	3869	11	3848	2	3848	1	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGACTGTCCTGGAA	9089	False	NA	NA	False	NA	NA	NA	120884070	120868399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_120870024_120871478_120871633_120873044_120873284_120874061_120874250_120876359_120876643_120876734_120876909_120879213_120879359_120881109_120881349_120883741
ES.27004.1	chr5	-	2631	8	ISM	ENSMUSG00000032661.10	ENSMUST00000044833.9	4720	16	15896	0	-4110	0	3prime_fragment	FALSE	canonical	1	3	junction_5	2.43276948084663	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTGGTTGTGATG	7691	False	NA	NA	False	NA	NA	NA	120899830	120891162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897985_120898160_120899189_120899335_120899645
ES.27004.2	chr5	-	2620	8	NNC	ENSMUSG00000032661.10	novel	4720	16	NA	NA	-4110	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.27014946921703	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTTGTGA	7691	False	NA	NA	False	NA	NA	NA	120899830	120891164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897994_120898160_120899189_120899335_120899645
ES.27004.3	chr5	-	2563	8	NNC	ENSMUSG00000032661.10	novel	4720	16	NA	NA	-4112	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.27014946921703	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTTGTGA	7689	False	NA	NA	False	NA	NA	NA	120899832	120891164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120896996_120897985_120898160_120899189_120899335_120899645
ES.27004.4	chr5	-	4189	6	NIC	ENSMUSG00000032661.10	novel	4720	16	NA	NA	-4110	-3	intron_retention	FALSE	canonical	2	5	junction_2	1.93907194296653	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCTTCTTGGTTGTG	7691	False	NA	NA	False	NA	NA	NA	120899830	120891165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120892441_120892620_120892769_120894091_120895146_120896777_120898160_120899189_120899335_120899645
ES.27005.1	chr5	+	673	1	Intergenic	novelGene_22498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGGTCCAACTTCCT	NA	False	NA	NA	False	NA	NA	NA	120948355	120949028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_120948400_120949000
ES.27006.1	chr5	-	1818	6	NIC	ENSMUSG00000001166.18	novel	2291	7	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	3.03315017762062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAAAACTAGTTTATTA	4880	False	NA	NA	False	ATTAAA	-19	NA	120950579	120938267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_120939129_120940105_120940260_120940886_120941123_120943468_120943666_120946024_120946314_120950498
ES.27006.2	chr5	-	2265	7	FSM	ENSMUSG00000001166.18	ENSMUST00000117193.8	2291	7	12	14	12	-14	multi-exon	FALSE	canonical	0	0	junction_6	3.19722101554181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGAACTCAAAACTAGTT	4892	False	NA	NA	False	ATTAAA	-14	NA	120950567	120938272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_120939129_120940105_120940260_120940886_120941123_120943468_120943666_120946024_120946314_120946645_120947110_120950498
ES.27007.1	chr5	-	155	1	Intergenic	novelGene_22499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAACAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	120988504	120988349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120988300_120988500
ES.27008.1	chr5	-	227	1	Intergenic	novelGene_22500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTATCCTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	120992259	120992032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_120992000_120992300
ES.27009.1	chr5	-	3198	1	Intergenic	novelGene_22501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATTAAAA	5584	False	NA	NA	False	NA	NA	NA	121004521	121001323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121001300_121004500
ES.2701.1	chr10	+	1723	8	Fusion	ENSMUSG00000102062.2_ENSMUSG00000038240.14	novel	706	3	NA	NA	642	1	multi-exon	TRUE	non_canonical	0	0	junction_1	33.0947927342422	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGTCTGCCTTTCT	NA	False	NA	NA	False	ATTAAA	-29	NA	43049900	43316599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_43050005_43174794_43174930_43221523_43221723_43248130_43248266_43269860_43270041_43271556_43271689_43289510_43289544_43315794
ES.2701.2	chr10	+	2159	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	-32	0	-32	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097449	43316598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ES.2701.3	chr10	+	2235	9	NIC	ENSMUSG00000038240.14	novel	2127	8	NA	NA	-6	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	31.5743170947528	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTCAATTGTATAAGAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	43097475	43316585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43278508_43278624_43289510_43289544_43315794
ES.2701.4	chr10	+	992	4	NIC	ENSMUSG00000038240.14	novel	4075	8	NA	NA	23	-11264	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	31.4783876475414	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAAAGTTTATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	43097535	43270127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43098057_43174794_43174930_43248130_43248206_43269866
ES.2701.5	chr10	+	1764	6	NIC	ENSMUSG00000038240.14	novel	2127	8	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.8679753360017	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAAAGTGTCTGCCTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	43097537	43316597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43289510_43289544_43315794
ES.2701.6	chr10	+	4139	1	Intergenic	novelGene_2063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGGAAATAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	43283176	43287315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_43283200_43287300
ES.2701.7	chr10	+	5077	1	Intergenic	novelGene_2065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTTGAGAATTTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	43297028	43302105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_43297000_43302100
ES.27010.1	chr5	+	4493	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25847	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74.9512341459432	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026751	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027060_121047136_121048168_121048598_121049813_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.10	chr5	+	2260	12	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25814	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.1856150062746	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026784	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026861_121047845_121047880_121049685_121049813_121050045_121050168_121051710_121051837_121052672_121052781_121052945_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.11	chr5	+	6989	10	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25814	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.3984756717522	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121026784	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027194_121047270_121048168_121048598_121050920_121051211_121052513_121052554_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.12	chr5	+	2001	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25810	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7487796249151	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026788	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026846_121052668_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.13	chr5	+	3759	1	Intergenic	novelGene_22503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCAGGATTAGCTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	121026789	121030548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121026800_121030500
ES.27010.14	chr5	+	2209	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25808	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.7487796249151	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026790	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027060_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.15	chr5	+	2134	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25806	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.2682515964555	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTAAATGAATTAATTT	NA	False	NA	11	True	ATTAAA	-17	NA	121026792	121059707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026862_121051710_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.16	chr5	+	2897	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25806	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.9398100790482	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATTAATTTATTCTC	NA	False	NA	17	True	ATTAAA	-23	NA	121026792	121059713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026866_121027773_121028383_121029004_121029275_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.17	chr5	+	2727	11	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25806	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.322695365198	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121026792	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026861_121027772_121028002_121048667_121048906_121049685_121049813_121050045_121050168_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.18	chr5	+	2142	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25802	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.9537833527571	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTAAATGAATTAATT	NA	False	NA	10	True	ATTAAA	-16	NA	121026796	121059706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026862_121050048_121050182_121052666_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.19	chr5	+	1744	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25802	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.9816302427185	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026796	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026862_121052672_121052781_121053041_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.2	chr5	+	3588	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25846	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.9398100790482	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121026752	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027060_121047136_121048168_121048598_121048906_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.20	chr5	+	2493	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25802	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.8089814889314	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121026796	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026862_121027897_121028383_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.21	chr5	+	3150	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25798	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9537833527571	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTAAATGAATTAATT	NA	False	NA	10	True	ATTAAA	-16	NA	121026800	121059706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027216_121047291_121048089_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.22	chr5	+	2357	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25786	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.6989147407407	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026812	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027012_121047088_121047181_121051710_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.23	chr5	+	2281	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25710	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.2682515964555	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026888	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027104_121051710_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.24	chr5	+	2821	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-24968	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.2682515964555	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121027630	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121028383_121051710_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.25	chr5	+	4219	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-23867	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.6989147407407	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121028731	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121028889_121049422_121050920_121051211_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.26	chr5	+	3154	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-21797	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.9537833527571	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121030801	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121030817_121051429_121052513_121052556_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.27	chr5	+	3202	1	Antisense	novelGene_ENSMUSG00000052776.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAATAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121039349	121042551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121039300_121042600
ES.27010.28	chr5	+	3225	1	Antisense	novelGene_ENSMUSG00000052776.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACTGGTAATCTTTTT	NA	False	NA	NA	False	TATAAA	-33	NA	121039875	121043100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121039900_121043100
ES.27010.29	chr5	+	3478	1	Antisense	novelGene_ENSMUSG00000052776.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATAGAGATGAATTA	NA	False	NA	NA	False	ATTAAA	-8	NA	121040007	121043485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121040000_121043500
ES.27010.3	chr5	+	2042	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25839	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.7487796249151	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026759	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026862_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.30	chr5	+	4683	9	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-3261	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.8911710417189	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121049337	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121050920_121051211_121052513_121052554_121052781_121053041_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.32	chr5	+	3665	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-1981	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.9537833527571	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAATTAATTTATTC	NA	False	NA	15	True	ATTAAA	-21	NA	121050617	121059711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121050920_121051211_121052515_121052555_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.33	chr5	+	3846	6	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-994	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	61.3592698783159	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121051604	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121052513_121052562_121053130_121053724_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.34	chr5	+	2283	7	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-307	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.7487796249151	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121052291	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121052513_121052550_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.4	chr5	+	4222	10	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25837	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.2618944375884	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026761	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027194_121047270_121048168_121048598_121049813_121052672_121052781_121053041_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.5	chr5	+	2308	10	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25816	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.0902647850678	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTATTCTCCCTCCCT	NA	False	NA	24	True	ATTAAA	-30	NA	121026782	121059720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026861_121027772_121027807_121028148_121028335_121048856_121048909_121052662_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059102
ES.27010.6	chr5	+	2648	8	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25816	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	71.9537833527571	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026782	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121027216_121047291_121047565_121052670_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.7	chr5	+	2645	13	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25814	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.5853623729309	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAAATGAATTAATTTA	NA	False	NA	12	True	ATTAAA	-18	NA	121026784	121059708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026861_121027772_121027807_121027897_121028002_121028145_121028335_121048856_121048906_121049685_121049813_121051710_121051837_121052672_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.8	chr5	+	1993	11	NNC	ENSMUSG00000032623.10	novel	2021	6	NA	NA	-25814	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.4863074665405	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTAAATGAATTAATT	NA	False	NA	10	True	ATTAAA	-16	NA	121026784	121059706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121026861_121027772_121027807_121027897_121028002_121028280_121028383_121052672_121052781_121053041_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ES.27010.9	chr5	+	154	1	Intergenic	novelGene_22502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATAACTGAGTCGTG	NA	False	NA	NA	False	NA	NA	NA	121026784	121026938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121026800_121026900
ES.27011.10	chr5	-	2283	1	Intergenic	novelGene_22506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-6	True	NA	NA	NA	121033145	121030862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121030900_121033100
ES.27011.11	chr5	-	3895	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	28	-446	intron_retention	FALSE	canonical	0	0	junction_5	276.900415312076	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTGGGCCATACAAGAAC	NA	False	NA	NA	False	AATAAA	-36	NA	121045556	121034764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121043868_121045356
ES.27011.14	chr5	-	2740	1	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	8072	-454	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGAGGAGTGGGCCAT	NA	False	NA	NA	False	AATAAA	-28	NA	121037512	121034772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121034800_121037500
ES.27011.15	chr5	-	4695	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	638	-463	intron_retention	FALSE	non_canonical	0	0	junction_5	276.900415312076	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121044946	121034781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121044251_121044312
ES.27011.17	chr5	-	5376	5	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	18	-464	intron_retention	FALSE	canonical	3	208	junction_1	193.287835882137	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045566	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658
ES.27011.18	chr5	-	1250	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	17	-464	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	232.879711439189	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045567	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121035088_121035242_121035270_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ES.27011.19	chr5	-	2542	5	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	6505	-464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	251.891221562007	349	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121039079	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121035365_121035478_121036381_121036536_121037135
ES.27011.20	chr5	-	1824	8	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	-1055	-464	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	234.35713197196	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121046639	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356_121045575_121046226
ES.27011.21	chr5	-	2601	3	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	6489	-464	intron_retention	FALSE	canonical	3	617	junction_2	27	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121039095	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121035270_121036381_121036536_121037135
ES.27011.22	chr5	-	1459	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	24	-464	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_4	248.197949673687	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045560	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039870_121040118_121043658_121043948_121045356
ES.27011.23	chr5	-	1770	4	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	7162	-464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	304.383895033156	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121038422	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035084_121035241_121035270_121036381_121036536_121037135
ES.27011.24	chr5	-	5573	5	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	879	-464	intron_retention	FALSE	non_canonical	0	0	junction_4	279.430671186969	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121044705	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121036536_121037135_121040118_121043658_121044251_121044304
ES.27011.25	chr5	-	5267	5	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	-667	-464	intron_retention	FALSE	canonical	1	2	junction_4	263.219490159828	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121046251	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121036536_121037135_121040118_121043658_121043948_121045356_121045575_121046226
ES.27011.26	chr5	-	1095	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	37	-464	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	252.598812348752	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045547	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121045356
ES.27011.27	chr5	-	4593	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	747	-464	intron_retention	FALSE	non_canonical	0	0	junction_5	276.900415312076	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121044837	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121044251_121044304
ES.27011.29	chr5	-	1373	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	38	-464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	253.677890684668	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045546	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039942_121040118_121043658_121043948_121045356
ES.27011.3	chr5	-	1472	7	FSM	ENSMUSG00000066861.15	ENSMUST00000162096.8	1489	7	16	1	-15	-1	multi-exon	FALSE	canonical	3	16	junction_4	130.842674825745	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121025660	121014785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019886_121020133_121023835_121024125_121025442
ES.27011.30	chr5	-	1453	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	-51	-464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.219050882862	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045635	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035096_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ES.27011.31	chr5	-	3968	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	17	-464	intron_retention	FALSE	canonical	3	208	junction_1	174.069641235915	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045567	121034782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121043948_121045356
ES.27011.32	chr5	-	2029	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	746	-465	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.900123017412	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGTGTGAACTCTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121044838	121034783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121044251_121044304
ES.27011.33	chr5	-	1401	6	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	20	-466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.219050882862	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTGTGAACTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121045564	121034784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035117_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ES.27011.34	chr5	-	1478	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	-17	-466	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	226.213026444839	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTGTGAACTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121045601	121034784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035312_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ES.27011.36	chr5	-	3392	4	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	5582	-467	intron_retention	FALSE	canonical	3	24	junction_2	247.831932298214	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTGTGAACTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	121040002	121034785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121035088_121035242_121035312_121036381_121036536_121037135
ES.27011.37	chr5	-	1211	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	7	-468	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	228.987384417182	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGTGTGTGAACTCT	NA	False	NA	NA	False	AATAAA	-14	NA	121045577	121034786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121034889_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ES.27011.38	chr5	-	2925	3	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	-22363	-468	intron_retention	TRUE	non_canonical	0	0	junction_2	308.5	351	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGTGTGTGAACTCT	NA	False	NA	NA	False	AATAAA	-14	NA	121067947	121034786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121036536_121037135_121038251_121067886
ES.27011.4	chr5	-	3993	6	NIC	ENSMUSG00000066861.15	novel	1489	7	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	61	junction_4	120.998181804521	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGTGTGAACTCTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121025691	121014786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121020133_121023835_121024125_121025442
ES.27011.40	chr5	-	775	4	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	3	-2085	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	260.604852005654	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCTCCTGGGATGTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	121045581	121036403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121036536_121037135_121037369_121039932_121040118_121045356
ES.27011.5	chr5	-	2056	12	Fusion	ENSMUSG00000066861.15_ENSMUSG00000052776.11	novel	1977	7	NA	NA	8233	-3	multi-exon	FALSE	canonical	0	0	junction_7	231.808306385019	483	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTGTGAACTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	121037351	121014787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442_121025661_121027350_121027450_121034737_121034889_121035242_121035270_121036381_121036536_121037135
ES.27011.7	chr5	-	577	1	NIC	ENSMUSG00000066861.15	novel	1977	7	NA	NA	2300	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGTGTGTGAACTCT	NA	False	NA	NA	False	AATAAA	-14	NA	121015366	121014789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121014800_121015400
ES.27011.8	chr5	-	5772	2	Intergenic	novelGene_22504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTCTGACCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	121033514	121027228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121030988_121031501
ES.27011.9	chr5	-	3929	4	Intergenic	novelGene_22505	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGTCTGACCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	121051954	121027228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121027436_121047508_121048166_121048597_121050920_121051211
ES.27012.1	chr5	+	162	1	Intergenic	novelGene_22507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAGTAGAAAACAAA	3727	False	NA	NA	False	NA	NA	NA	121224149	121224311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121224100_121224300
ES.27013.1	chr5	-	178	1	Intergenic	novelGene_22508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAAATTAGCAGT	NA	False	NA	NA	False	NA	NA	NA	121232357	121232179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121232200_121232400
ES.27014.1	chr5	-	5647	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	-48	0	-48	0	multi-exon	TRUE	canonical	3	69	junction_6	9.90263713473448	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	804	False	NA	0	True	AATAAA	-23	NA	121329508	121268595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ES.27014.10	chr5	-	176	1	Intergenic	novelGene_22509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	121275907	121275731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121275700_121275900
ES.27014.11	chr5	-	221	1	Intergenic	novelGene_22510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTTTAAGATTTTA	NA	False	NA	NA	False	NA	NA	NA	121309544	121309323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121309300_121309500
ES.27014.2	chr5	-	5649	16	FSM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	-109	-5	-41	-1	multi-exon	FALSE	non_canonical	0	0	junction_6	23.8687149959011	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCATTTGGTCTGT	811	False	NA	-3	True	AATAAA	-20	NA	121329501	121268598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282760_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ES.27014.6	chr5	-	5590	16	NNC	ENSMUSG00000043733.15	novel	5599	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	23.9801769986981	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTATTTGTCATTTGG	831	False	NA	-8	True	AATAAA	-15	NA	121329481	121268603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305933_121306107_121310043_121310167_121329264
ES.27014.8	chr5	-	2558	4	NNC	ENSMUSG00000043733.15	novel	7442	15	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.0072458061409	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACAGTATTTGTCATTT	835	False	NA	-10	True	AATAAA	-13	NA	121329477	121268605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121270712_121305990_121306107_121310043_121310167_121329264
ES.27014.9	chr5	-	2261	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	11	3327	11	-20	multi-exon	FALSE	canonical	3	69	junction_6	9.90263713473448	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTTTTTTTTATGAC	863	False	NA	NA	False	NA	NA	NA	121329449	121271922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ES.27015.1	chr5	+	1036	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	-34	268	-34	7	multi-exon	FALSE	canonical	3	7748	junction_1	3319.97705815367	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTTTTGTGTGTTGTG	NA	False	NA	8	True	ATTAAA	-22	NA	121342509	121347036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.10	chr5	+	4138	3	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	16758	junction_2	297.5	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342595	121347029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121343727_121343816_121346639_121346844
ES.27015.11	chr5	+	735	5	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7140.46053749336	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342595	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121346469_121346639_121346844
ES.27015.13	chr5	+	891	6	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	1	12	junction_4	6538.06835082045	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGGTGTCCTTTTTG	NA	False	NA	-1	True	ATTAAA	-13	NA	121342596	121347027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121346453_121346639_121346844
ES.27015.14	chr5	+	777	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	6219.88043829354	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342596	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346519_121346890
ES.27015.15	chr5	+	922	7	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_5	6253.6391183232	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTCCTTTTTGT	NA	False	NA	0	True	ATTAAA	-14	NA	121342596	121347028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346472_121346639_121346844
ES.27015.16	chr5	+	3325	4	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	14010	junction_2	1456.06692459134	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTCCTTTTTGT	NA	False	NA	0	True	ATTAAA	-14	NA	121342596	121347028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121343727_121343816_121343919_121344729_121346639_121346844
ES.27015.17	chr5	+	1792	6	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-3	6	intron_retention	FALSE	canonical	3	14010	junction_2	1238.46727853424	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTTTTTGTGTGTTGT	NA	False	NA	7	True	ATTAAA	-21	NA	121342605	121347035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.19	chr5	+	3022	3	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15457	junction_1	650.5	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342606	121347029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121345259_121346453_121346639_121346844
ES.27015.2	chr5	+	976	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6136.89765317587	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342557	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342616_121343468_121343727_121343822_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.20	chr5	+	1021	7	NNC	ENSMUSG00000029614.14	novel	486	4	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	3	184	junction_1	6047.1114224525	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342621	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342719_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.22	chr5	+	1166	7	NNC	ENSMUSG00000029614.14	novel	486	4	NA	NA	99	10	at_least_one_novel_splicesite	FALSE	canonical	3	211	junction_1	6037.22683071918	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTGTGTGTTGTGTGT	NA	False	NA	11	True	ATTAAA	-25	NA	121342707	121347039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342941_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.23	chr5	+	922	6	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6461.01702830135	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTCCTTTTTGTGTGTT	NA	False	NA	5	True	ATTAAA	-19	NA	121343466	121347033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121343727_121343816_121343919_121344729_121344867_121345209_121345259_121346453_121346639_121346844
ES.27015.24	chr5	+	672	5	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	1272	269	344	6	3prime_fragment	FALSE	canonical	3	14010	junction_1	1202.18080482929	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTTTTTGTGTGTTGT	NA	False	NA	7	True	ATTAAA	-21	NA	121343815	121347035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ES.27015.4	chr5	+	966	7	NNC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6359.98192913226	1760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTGGTGTCCTTTTTG	NA	False	NA	-1	True	ATTAAA	-13	NA	121342563	121347027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345252_121346453_121346639_121346844
ES.27015.5	chr5	+	4467	1	FSM	ENSMUSG00000029614.14	ENSMUST00000197044.2	714	1	-45	-3708	20	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1760	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342563	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121342600_121347000
ES.27015.6	chr5	+	4257	2	FSM	ENSMUSG00000064841.3_ENSMUSG00000029614.14	ENSMUST00000138621.2	565	2	-3691	-1	-16	1	multi-exon	FALSE	canonical	3	16758	junction_1	0	1760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTCCTTTTTGTGT	NA	False	NA	2	True	ATTAAA	-16	NA	121342567	121347030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121346639_121346844
ES.27015.7	chr5	+	3426	3	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	14010	junction_1	1374	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTGTCCTTTTTGT	NA	False	NA	0	True	ATTAAA	-14	NA	121342585	121347028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121343919_121344729_121346639_121346844
ES.27015.8	chr5	+	2956	5	NIC	ENSMUSG00000029614.14	novel	1270	7	NA	NA	5	0	intron_retention	FALSE	canonical	3	7748	junction_1	4033.80994687405	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121342588	121347029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121342616_121343468_121343727_121343816_121344874_121345209_121346639_121346844
ES.27016.1	chr5	-	1745	3	Antisense	novelGene_ENSMUSG00000029614.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGGCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	121349277	121347271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121348180_121348381_121349062_121349120
ES.27017.1	chr5	+	183	1	Intergenic	novelGene_22511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATTAGACCTTAA	NA	False	NA	3	True	NA	NA	NA	121351486	121351669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121351500_121351700
ES.27018.1	chr5	-	218	1	Intergenic	novelGene_22512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTCCTTATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	121354058	121353840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121353800_121354100
ES.27019.1	chr5	+	323	1	Intergenic	novelGene_22513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTCCAGACAGAATT	1257	False	NA	NA	False	AATAAA	-8	NA	121355223	121355546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121355200_121355500
ES.2702.1	chr10	-	3488	4	NNC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	92673	-633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.94392028877595	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	42957844	42879128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42880411_42896977_42898915_42950588_42950685_42957671
ES.2702.2	chr10	-	1505	6	NIC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	47	-1482	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.8	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCTGTGGTTTGCT	NA	False	NA	NA	False	TATAAA	-8	NA	43050470	42879977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42880411_42950588_42950685_43003774_43003927_43033903_43034090_43036701_43036841_43049971
ES.2702.3	chr10	-	5249	1	Intergenic	novelGene_2058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATCTAATTCTTATTGT	NA	False	NA	NA	False	AATAAA	-19	NA	42893911	42888662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_42888700_42893900
ES.2702.4	chr10	-	3920	6	ISM	ENSMUSG00000038248.9	ENSMUST00000040275.9	4980	7	56	17571	47	-17571	5prime_fragment	FALSE	canonical	0	0	junction_2	2.60768096208106	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTACAGAAAGAAGAGAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	43050470	42896066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_42898915_42950588_42950685_43003774_43003927_43033903_43034090_43036701_43036841_43049971
ES.2702.5	chr10	-	2952	5	NIC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	20	-18470	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.82915619758885	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCGTTCCTCCAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	43050497	42896965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_42898915_43003774_43003927_43033903_43034090_43036701_43036841_43049971
ES.2702.6	chr10	-	2204	3	NNC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	92687	-18470	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCGTTCCTCCAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	42957830	42896965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42898915_42950588_42950685_42957671
ES.2702.7	chr10	-	3075	6	NNC	ENSMUSG00000038248.9	novel	4980	7	NA	NA	-3	-18472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.60768096208106	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGGCGTTCCTCCAA	NA	False	NA	NA	False	AATAAA	-13	NA	43050529	42896967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_42898915_42950588_42950685_43003774_43003924_43033903_43034090_43036701_43036841_43049971
ES.2702.9	chr10	-	6411	1	Intergenic	novelGene_2060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43003334	42996923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_42996900_43003300
ES.27020.1	chr5	-	176	1	Intergenic	novelGene_22514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTCTCAGCCGG	NA	False	NA	NA	False	NA	NA	NA	121356248	121356072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121356100_121356200
ES.27021.1	chr5	+	4722	11	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	-10	84125	-10	-14997	5prime_fragment	FALSE	canonical	2	3	junction_9	2.83548937575157	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	4305	False	NA	NA	False	NA	NA	NA	121358271	121422515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866
ES.27021.10	chr5	+	11157	38	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	4811	-2719	intron_retention	FALSE	canonical	0	0	junction_10	6.45793264778075	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAAACCTGACTTAAAT	NA	False	NA	NA	False	NA	NA	NA	121448603	121503921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460810_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481748_121482745_121482931_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805
ES.27021.12	chr5	+	3521	1	NIC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	267	891	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	1383	False	NA	NA	False	NA	NA	NA	121454084	121457605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121454100_121457600
ES.27021.13	chr5	+	4203	17	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	124483	1712	24679	-1712	3prime_fragment	FALSE	canonical	3	9	junction_5	5.88960949469487	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTGGTGGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	121482764	121504928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.14	chr5	+	156	1	Intergenic	novelGene_22522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAATAAATCTAAA	1710	False	NA	NA	False	NA	NA	NA	121485500	121485656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121485500_121485700
ES.27021.15	chr5	+	5314	16	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	28919	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.61368420337985	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACCTAAGAGTCTGT	3214	False	NA	5	True	AATAAA	-16	NA	121487004	121506626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498098_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504500
ES.27021.16	chr5	+	6300	10	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	33812	-8	intron_retention	FALSE	canonical	3	11	junction_3	5.57994645755099	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAGAGTCTGTGGTCAC	8107	False	NA	11	True	AATAAA	-22	NA	121491897	121506632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501970_121502598
ES.27021.17	chr5	+	3752	11	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	135982	6	36178	-6	3prime_fragment	FALSE	canonical	3	11	junction_1	5.61159513863928	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGTCTGTGGTCACCT	NA	False	NA	13	True	AATAAA	-24	NA	121494263	121506634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.18	chr5	+	3915	3	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	143670	10	43866	-10	intron_retention	FALSE	canonical	3	21	junction_2	2	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAAGAGTCTGTGGTC	NA	False	NA	9	True	AATAAA	-20	NA	121501951	121506630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121501970_121502598_121502795_121502929
ES.27021.2	chr5	+	15514	76	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	-9	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	6.40757884591884	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAAGAGTCTGTGGTC	4306	False	NA	9	True	AATAAA	-20	NA	121358272	121506630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430916_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439804_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444173_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467689_121469738_121469977_121470984_121471122_121471485_121471614_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.3	chr5	+	6922	41	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	-6	46856	-6	-1058	5prime_fragment	FALSE	canonical	1	3	junction_9	3.04097023990699	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTCTGTCGACATC	4309	False	NA	NA	False	AATAAA	-12	NA	121358275	121459784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430916_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460
ES.27021.4	chr5	+	1304	2	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	-5	113857	-5	-44729	5prime_fragment	FALSE	canonical	3	14	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGTTCTCACCTGGTC	4310	False	NA	NA	False	AATAAA	-20	NA	121358276	121392783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121358721_121391923
ES.27021.5	chr5	+	15486	76	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	6.1400832422877	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGAGTCTGTGGTCACC	4311	False	NA	12	True	AATAAA	-23	NA	121358277	121506633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462101_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.6	chr5	+	10262	60	NIC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	51	20618	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	3.34684611449423	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCTGTTGATGGTTT	4366	False	NA	NA	False	ATTAAA	-12	NA	121358332	121483504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745
ES.27021.7	chr5	+	15229	75	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	91	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_51	6.20033223266876	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTGACCTAAGAGTCT	4406	False	NA	3	True	AATAAA	-14	NA	121358372	121506624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430916_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481557_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.8	chr5	+	11280	49	NNC	ENSMUSG00000042744.17	novel	15482	76	NA	NA	322	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.9612020034857	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAAGAGTCTGTGGTC	NA	False	NA	9	True	AATAAA	-20	NA	121444114	121506630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446540_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121454022_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493628_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ES.27021.9	chr5	+	2605	16	ISM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	90319	39338	4808	4416	internal_fragment	FALSE	canonical	2	5	junction_4	2.90287214094363	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCATCTGTCATTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	121448600	121467302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127
ES.27022.1	chr5	-	238	1	Intergenic	novelGene_22515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTTTTGGTCTAATA	NA	False	NA	NA	False	NA	NA	NA	121362259	121362021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121362000_121362300
ES.27023.1	chr5	-	353	1	Intergenic	novelGene_22516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121398692	121398339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121398300_121398700
ES.27024.1	chr5	-	157	1	Intergenic	novelGene_22517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121416478	121416321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121416300_121416500
ES.27025.1	chr5	-	353	1	Intergenic	novelGene_22518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCAGGTCAGTCTGGC	NA	False	NA	NA	False	NA	NA	NA	121426579	121426226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121426200_121426600
ES.27025.2	chr5	-	179	1	Intergenic	novelGene_22519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATGCACTTA	NA	False	NA	NA	False	NA	NA	NA	121426581	121426402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121426400_121426600
ES.27026.1	chr5	-	153	1	Intergenic	novelGene_22520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTTAAAAACAA	4647	False	NA	NA	False	NA	NA	NA	121447843	121447690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121447700_121447800
ES.27027.1	chr5	-	267	1	Intergenic	novelGene_22521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	121458817	121458550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121458600_121458800
ES.27028.1	chr5	-	2048	1	Antisense	novelGene_ENSMUSG00000042744.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCCAGGAACACACGG	NA	False	NA	NA	False	NA	NA	NA	121507291	121505243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121505200_121507300
ES.27029.1	chr5	+	179	1	Intergenic	novelGene_22523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	8084	False	NA	NA	False	NA	NA	NA	121514994	121515173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121515000_121515200
ES.27029.2	chr5	+	282	1	Intergenic	novelGene_22524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAACAATCCA	8084	False	NA	NA	False	NA	NA	NA	121514994	121515276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121515000_121515300
ES.2703.1	chr10	-	3078	2	Antisense	novelGene_ENSMUSG00000038240.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTATAGCCAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	43235356	43230400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_43231180_43233057
ES.2703.2	chr10	-	4924	1	Intergenic	novelGene_2061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43235356	43230432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43230400_43235400
ES.2703.3	chr10	-	4167	1	Intergenic	novelGene_2062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTTTTCAACCAATCAAC	NA	False	NA	NA	False	NA	NA	NA	43235356	43231189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43231200_43235400
ES.27030.1	chr5	-	1588	7	NNC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	1018	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	13.6188186793944	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	5718	False	NA	0	True	AATAAA	-18	NA	121515868	121509788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512125_121513078_121513310_121513858_121513936_121515800
ES.27030.2	chr5	-	1892	4	ISM	ENSMUSG00000042726.15	ENSMUST00000156158.6	3083	6	3606	1	-1743	-1	3prime_fragment	FALSE	canonical	3	16	junction_2	12.5698050899765	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGATTCTTTCTATA	8306	False	NA	0	True	AATAAA	-18	NA	121513280	121509788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_121510476_121510665_121510739_121511200_121512131_121513078
ES.27030.3	chr5	-	2985	11	NNC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	23	2	intron_retention	FALSE	non_canonical	0	0	junction_2	12.9849913361542	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGTGATTCTTTCTA	3595	False	NA	-2	True	AATAAA	-16	NA	121523669	121509790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121510739_121511161_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ES.27030.4	chr5	-	4192	10	NNC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	22	1	intron_retention	FALSE	non_canonical	0	0	junction_3	15.734682930189	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTTGTGATTCTTTCT	3594	False	NA	-3	True	AATAAA	-15	NA	121523670	121509791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121510739_121511401_121512294_121512343_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ES.27030.5	chr5	-	2487	12	NNC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.3447609430855	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTTGTGATTCTTTCT	3574	False	NA	-3	True	AATAAA	-15	NA	121523690	121509791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522161_121523587
ES.27030.6	chr5	-	2053	10	NIC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.3673085859458	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTGTGATTCTTT	3626	False	NA	-5	True	AATAAA	-13	NA	121523638	121509793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121510476_121510665_121510739_121511401_121511538_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121523587
ES.27030.7	chr5	-	4858	9	NNC	ENSMUSG00000042726.15	novel	2503	12	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	14.1598022585063	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTGTGATTCTTT	3589	False	NA	-5	True	AATAAA	-13	NA	121523675	121509793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121512294_121512343_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ES.27030.8	chr5	-	2477	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	20	6	17	-1	multi-exon	FALSE	canonical	3	16	junction_2	8.79894809640935	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTGTGATTCTTT	3589	False	NA	-5	True	AATAAA	-13	NA	121523675	121509793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ES.27030.9	chr5	-	2847	11	NNC	ENSMUSG00000042726.15	novel	2425	12	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	17.9279112001371	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTGTGATTCTTT	3625	False	NA	-5	True	AATAAA	-13	NA	121523639	121509793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121510476_121510665_121510739_121511212_121512131_121513078_121513263_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522161_121523587
ES.27031.1	chr5	-	159	1	Intergenic	novelGene_22525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	121532216	121532057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121532100_121532200
ES.27032.1	chr5	+	3912	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	-35	1570	-35	323	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTACTCTAGTGCTTTT	NA	False	NA	4	True	CATAAA	-17	NA	121535963	121578902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.10	chr5	+	5702	23	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	37	54	-21	-54	intron_retention	FALSE	canonical	3	302	junction_8	45.5453638177285	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTATATGTCTTTCATT	NA	False	NA	31	True	NA	NA	NA	121536035	121580418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397
ES.27032.11	chr5	+	5550	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	39	-142	-19	142	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCCTGGTTCGTTTTT	NA	False	NA	28	True	CATAAA	-21	NA	121536037	121580614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.12	chr5	+	5231	26	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-15	140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	130.83391609212	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTCCTGGTTCGTTT	NA	False	NA	26	True	CATAAA	-19	NA	121536041	121580612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890_121578162_121578603
ES.27032.13	chr5	+	5572	25	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.942188065228	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	False	NA	19	True	AATACA	-18	NA	121536042	121580472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121543553_121543723_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.14	chr5	+	3481	23	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	45	2267	-13	211	intron_retention	FALSE	canonical	3	302	junction_8	45.5453638177285	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGACCCTCATCTGGG	NA	False	NA	32	True	ATTAAA	-37	NA	121536043	121578205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397
ES.27032.15	chr5	+	3735	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-13	316	combination_of_known_splicesites	FALSE	canonical	1	6	junction_12	92.7161758065891	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATTTACTACTCTAG	NA	False	NA	-3	True	CATAAA	-10	NA	121536043	121578895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.16	chr5	+	3958	25	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-13	320	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.146822167292	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTACTACTCTAGTGCT	NA	False	NA	1	True	CATAAA	-14	NA	121536043	121578899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.2	chr5	+	3224	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	-30	2253	-30	225	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTTACCACTCTTTA	NA	False	NA	46	True	ATTAAA	-33	NA	121535968	121578219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.20	chr5	+	4037	24	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-13	213	intron_retention	FALSE	canonical	3	19	junction_15	114.361166356899	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACCCTCATCTGGGTT	NA	False	NA	34	True	ATTAAA	-39	NA	121536043	121578207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.21	chr5	+	5232	25	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-13	-299	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.146822167292	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGACTACTGTTTACAGA	NA	False	NA	NA	False	TTTAAA	-12	NA	121536043	121580173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.22	chr5	+	5702	26	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.368660943593	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGGTTTGTTGAGAC	NA	False	NA	18	True	AATACA	-17	NA	121536044	121580471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121541895_121542029_121543553_121543723_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.23	chr5	+	2658	22	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	46	3585	-12	4	5prime_fragment	FALSE	canonical	3	302	junction_8	46.1734873028366	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATCATCATGGTAATG	NA	False	NA	NA	False	ATTAAA	-33	NA	121536044	121576887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790
ES.27032.24	chr5	+	7131	24	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-12	579	intron_retention	FALSE	canonical	3	19	junction_16	114.321785760339	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTACTGCTTCGGGCTA	NA	False	NA	NA	False	AATAAA	-15	NA	121536044	121581051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.25	chr5	+	6791	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-12	211	intron_retention	FALSE	canonical	3	19	junction_15	90.2253033904615	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGACCCTCATCTGGG	NA	False	NA	32	True	ATTAAA	-37	NA	121536044	121578205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.27	chr5	+	5313	23	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-9	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	88.3097478778415	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAATCTGTATATGTC	NA	False	NA	24	True	NA	NA	NA	121536047	121580411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121575628_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.28	chr5	+	4787	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-9	-525	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	90.1593286657268	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTATTCTTTTGGA	NA	False	NA	NA	False	AAAAAG	-30	NA	121536047	121579947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.29	chr5	+	3040	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-9	210	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	92.1489541561168	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGACCCTCATCTGG	NA	False	NA	31	True	ATTAAA	-36	NA	121536047	121578204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.3	chr5	+	7657	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	15	-1	intron_retention	FALSE	canonical	3	19	junction_16	115.303121889025	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGGTTTGTTGAGAC	NA	False	NA	18	True	AATACA	-17	NA	121536013	121580471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.30	chr5	+	3257	25	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-8	209	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.146822167292	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGGACCCTCATCTG	NA	False	NA	30	True	ATTAAA	-35	NA	121536048	121578203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.31	chr5	+	6109	14	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-8	3899	intron_retention	FALSE	canonical	3	302	junction_8	42.3730962987227	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAAAGAAAAAGATTAAA	NA	False	NA	NA	False	NA	NA	NA	121536048	121568480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121562667_121564033_121564215_121564789
ES.27032.35	chr5	+	7940	12	NNC	ENSMUSG00000042719.18	novel	4143	12	NA	NA	-5	3899	intron_retention	FALSE	canonical	1	1	junction_11	117.843782291614	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAAAGAAAAAGATTAAA	NA	False	NA	NA	False	NA	NA	NA	121536051	121568480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561705
ES.27032.36	chr5	+	3825	24	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	0	210	intron_retention	FALSE	canonical	3	19	junction_15	114.466577451661	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGACCCTCATCTGG	NA	False	NA	31	True	ATTAAA	-36	NA	121536056	121578204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.37	chr5	+	3033	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	0	209	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	90.1593286657268	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGGACCCTCATCTG	NA	False	NA	30	True	ATTAAA	-35	NA	121536057	121578203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.38	chr5	+	6152	23	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	91.5357153797502	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	False	NA	19	True	AATACA	-18	NA	121536057	121580472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536119_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.39	chr5	+	3870	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	190	intron_retention	FALSE	canonical	3	302	junction_8	46.1481623963727	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATTGTATATAAACCA	NA	False	NA	11	True	ATTAAA	-16	NA	121536058	121578184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.4	chr5	+	5211	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	20	216	20	-216	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCGGGTTCAAGTTACT	NA	False	NA	NA	False	NA	NA	NA	121536018	121580256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.40	chr5	+	5232	22	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	185	intron_retention	FALSE	canonical	3	302	junction_8	46.9359094067297	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAATTATTGTATATA	NA	False	NA	6	True	ATTAAA	-11	NA	121536058	121578179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.41	chr5	+	3055	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	91.6230256429972	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTTTACCACTCTTT	NA	False	NA	45	True	ATTAAA	-32	NA	121536058	121578218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572966_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.46	chr5	+	11131	21	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	182	intron_retention	FALSE	canonical	3	302	junction_8	46.3180310462351	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATTAAATTATTGTAT	NA	False	NA	3	True	ATTAAA	-8	NA	121536058	121578176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121568820_121569522_121573133_121573522_121573647_121574721_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.47	chr5	+	5357	25	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.942188065228	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATCTGTATATGTCTT	NA	False	NA	26	True	NA	NA	NA	121536058	121580413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121537094_121537124_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.48	chr5	+	5687	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	60	-300	1	300	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATGTTCTGGGGGGGT	NA	False	NA	NA	False	NA	NA	NA	121536058	121580772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.49	chr5	+	5990	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	60	-603	1	603	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCCCTTAAGTTTTAT	NA	False	NA	NA	False	AATAAA	-39	NA	121536058	121581075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.5	chr5	+	5553	25	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.146822167292	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	False	NA	19	True	AATACA	-18	NA	121536021	121580472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.50	chr5	+	4445	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	-940	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	90.0700000829013	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTACTGTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	121536058	121579532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555441_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.51	chr5	+	3104	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	91.3254426977058	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATTATTGTATATAAAC	NA	False	NA	9	True	ATTAAA	-14	NA	121536058	121578182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555432_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.52	chr5	+	3008	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	210	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	93.2838908789758	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGGACCCTCATCTGG	NA	False	NA	31	True	ATTAAA	-36	NA	121536058	121578204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121577397_121577545_121577890
ES.27032.53	chr5	+	5757	24	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	1	213	intron_retention	FALSE	canonical	3	19	junction_15	88.3419417759683	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACCCTCATCTGGGTT	NA	False	NA	34	True	ATTAAA	-39	NA	121536058	121578207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.54	chr5	+	2989	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	3	190	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	91.5850550375889	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATTGTATATAAACCA	NA	False	NA	11	True	ATTAAA	-16	NA	121536060	121578184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561705_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.55	chr5	+	4550	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	62	835	3	-835	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGTGTGTTCACGGT	NA	False	NA	NA	False	NA	NA	NA	121536060	121579637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.56	chr5	+	5408	23	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	4	135	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	93.2838908789758	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGCACTTTTCCTGGTT	NA	False	NA	21	True	CATAAA	-14	NA	121536061	121580607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121577397_121577545_121577890
ES.27032.57	chr5	+	8201	21	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	4	323	intron_retention	FALSE	non_canonical	0	0	junction_4	97.9925507372882	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTACTCTAGTGCTTTT	NA	False	NA	4	True	CATAAA	-17	NA	121536061	121578902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547254_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.58	chr5	+	5544	24	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-5	-314	intron_retention	FALSE	canonical	3	19	junction_16	113.755500085147	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAACAAAAACCACG	NA	False	NA	NA	False	NA	NA	NA	121536062	121580158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397
ES.27032.59	chr5	+	5880	21	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-5	4	intron_retention	FALSE	canonical	3	302	junction_8	46.281178679891	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATCATCATGGTAATG	NA	False	NA	NA	False	ATTAAA	-33	NA	121536062	121576887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790
ES.27032.6	chr5	+	5445	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	23	-21	23	21	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTACTTTTTTATGTGAT	NA	False	NA	40	True	AATACA	-39	NA	121536021	121580493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.60	chr5	+	5346	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-5	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.3696453878348	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAATCTGTATATGTC	NA	False	NA	24	True	NA	NA	NA	121536062	121580411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546235_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.61	chr5	+	3143	25	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-5	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.942188065228	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGGACCCTCATCTG	NA	False	NA	30	True	ATTAAA	-35	NA	121536062	121578203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121537094_121537124_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.62	chr5	+	5633	24	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-5	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	91.3696453878348	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGGCACTTTTCCTGG	NA	False	NA	19	True	CATAAA	-12	NA	121536062	121580605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121577019_121577397_121577545_121577890
ES.27032.63	chr5	+	6946	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	66	-1565	-3	-404	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	121536064	121582037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.66	chr5	+	5999	24	NNC	ENSMUSG00000042719.18	novel	757	3	NA	NA	227	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.652869731201	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTACTGCTTCGGGCTA	NA	False	NA	NA	False	AATAAA	-15	NA	121536294	121581051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536395_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.67	chr5	+	3207	24	NNC	ENSMUSG00000042719.18	novel	757	3	NA	NA	228	213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.652869731201	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACCCTCATCTGGGTT	NA	False	NA	34	True	ATTAAA	-39	NA	121536295	121578207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536448_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.68	chr5	+	5597	24	NNC	ENSMUSG00000042719.18	novel	757	3	NA	NA	237	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.652869731201	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGCACTTTTCCTGGT	NA	False	NA	20	True	CATAAA	-13	NA	121536304	121580606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536448_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.69	chr5	+	5396	24	NNC	ENSMUSG00000042719.18	novel	757	3	NA	NA	243	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.652869731201	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAATCTGTATATGTC	NA	False	NA	24	True	NA	NA	NA	121536310	121580411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536448_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.7	chr5	+	5649	26	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-23	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.986531788301	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAATCTGTATATGTC	NA	False	NA	24	True	NA	NA	NA	121536033	121580411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121543553_121543723_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.70	chr5	+	5833	25	NNC	ENSMUSG00000042719.18	novel	757	3	NA	NA	413	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.942188065228	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGACTACTGTTTACAGA	NA	False	NA	NA	False	TTTAAA	-12	NA	121536480	121580173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121537124_121543553_121543723_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.71	chr5	+	3470	1	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	13915	-11129	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGCAGTCAATAAGTT	NA	False	NA	NA	False	NA	NA	NA	121549982	121553452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121550000_121553500
ES.27032.72	chr5	+	2712	20	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	15068	2267	14999	211	3prime_fragment	FALSE	canonical	3	302	junction_4	44.8322203090516	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGACCCTCATCTGGG	NA	False	NA	32	True	ATTAAA	-37	NA	121551066	121578205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.73	chr5	+	5632	18	NIC	ENSMUSG00000042719.18	novel	2910	24	NA	NA	16796	-313	intron_retention	FALSE	canonical	3	19	junction_10	127.388271148868	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAAAAACCACGA	NA	False	NA	NA	False	NA	NA	NA	121552863	121580159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.74	chr5	+	176	1	Intergenic	novelGene_22527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	121552990	121553166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121553000_121553200
ES.27032.75	chr5	+	2584	18	NNC	ENSMUSG00000042719.18	novel	2910	24	NA	NA	19370	209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.049732348552	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGGACCCTCATCTG	NA	False	NA	30	True	ATTAAA	-35	NA	121555437	121578203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121555552_121555981_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.76	chr5	+	3422	17	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	19938	-58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	103.386543339789	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATCTGTATATGTCTTT	NA	False	NA	27	True	NA	NA	NA	121556005	121580414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890_121579256_121580361
ES.27032.78	chr5	+	3412	12	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-16583	190	intron_retention	FALSE	canonical	3	346	junction_5	43.3679243162978	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATTGTATATAAACCA	NA	False	NA	11	True	ATTAAA	-16	NA	121560897	121578184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.79	chr5	+	3875	11	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	28032	59	-13450	-59	3prime_fragment	FALSE	canonical	3	346	junction_4	43.9464446798601	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATCTGTATATGTCTT	NA	False	NA	26	True	NA	NA	NA	121564030	121580413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.8	chr5	+	3216	25	NNC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-21	209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.942188065228	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGGACCCTCATCTG	NA	False	NA	30	True	ATTAAA	-35	NA	121536035	121578203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121536126_121536447_121536523_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.80	chr5	+	3750	10	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	28790	1	-12692	-1	3prime_fragment	FALSE	canonical	3	346	junction_3	45.619467362839	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGGTTTGTTGAGAC	NA	False	NA	18	True	AATACA	-17	NA	121564788	121580471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.81	chr5	+	3753	4	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	-4059	320	intron_retention	FALSE	canonical	3	419	junction_2	36.1754981536767	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTACTACTCTAGTGCT	5707	False	NA	1	True	CATAAA	-14	NA	121573421	121578899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121574788_121575670_121576902_121577397_121577545_121577890
ES.27032.82	chr5	+	3007	5	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	38719	1	-2763	-1	3prime_fragment	FALSE	canonical	3	397	junction_2	38.329981737538	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGGTTTGTTGAGAC	7003	False	NA	18	True	AATACA	-17	NA	121574717	121580471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27032.9	chr5	+	4968	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	37	442	-21	-442	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGCCTCCTCTCCCCAC	NA	False	NA	NA	False	NA	NA	NA	121536035	121580030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ES.27033.1	chr5	-	3032	1	Intergenic	novelGene_22526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGACCTTGATAAAGCT	5567	False	NA	NA	False	NA	NA	NA	121540163	121537131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121537100_121540200
ES.27034.1	chr5	-	3576	1	Antisense	novelGene_ENSMUSG00000042719.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121551317	121547741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121547700_121551300
ES.27035.1	chr5	-	2606	4	NNC	ENSMUSG00000029616.10	novel	748	4	NA	NA	4	-1702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.568895513616	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTAGCCTGTCCAGTTA	3235	False	NA	NA	False	AATAAA	-11	NA	121590546	121580588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121581161_121582033_121583636_121585203_121585343_121590253
ES.27035.10	chr5	-	1556	3	NNC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	421	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	3307	False	NA	-41	True	AATAAA	-14	NA	121590474	121582818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121584015_121585203_121585343_121590253
ES.27035.2	chr5	-	1281	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	-5	3928	-5	4	multi-exon	FALSE	canonical	3	820	junction_1	20.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTCTTTTTAGATAA	3207	False	NA	-37	True	AATAAA	-18	NA	121590574	121582814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121583636_121585203_121585343_121590253
ES.27035.3	chr5	-	5167	1	NIC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	2428	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	5798	False	NA	-39	True	AATAAA	-16	NA	121587983	121582816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121582800_121588000
ES.27035.4	chr5	-	1132	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	-7	-2	3	2	multi-exon	FALSE	canonical	3	31	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	3215	False	NA	-39	True	AATAAA	-16	NA	121590566	121582816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121583636_121590253
ES.27035.5	chr5	-	1209	3	NNC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.5	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	3264	False	NA	-39	True	AATAAA	-16	NA	121590517	121582816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121583636_121585216_121585343_121590253
ES.27035.6	chr5	-	1242	3	NNC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	407.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	3260	False	NA	-39	True	AATAAA	-16	NA	121590521	121582816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121583636_121585203_121585359_121590253
ES.27035.7	chr5	-	4514	3	NNC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	212	2	intron_retention	TRUE	non_canonical	0	0	junction_2	410	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTTCTTTTTAGAT	3582	False	NA	-39	True	AATAAA	-16	NA	121590199	121582816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121583636_121585203_121588207_121589507
ES.27035.8	chr5	-	1524	4	NNC	ENSMUSG00000029616.10	novel	748	4	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	386.316220501058	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTTTCTTTTTAGA	3246	False	NA	-40	True	AATAAA	-15	NA	121590535	121582817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121583636_121585203_121585343_121585475_121585761_121590253
ES.27035.9	chr5	-	1083	3	NNC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	410	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGTTTTCTTTTTAGA	3224	False	NA	-40	True	AATAAA	-15	NA	121590557	121582817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121583636_121585203_121585343_121590431
ES.27036.1	chr5	+	1118	10	ISM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	9	949	9	0	5prime_fragment	FALSE	canonical	3	13	junction_1	4.29469957557504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGTACCAGTACTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	121601223	121632508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266
ES.27036.2	chr5	+	962	9	ISM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	30	1512	30	-367	5prime_fragment	FALSE	canonical	3	13	junction_1	4.38035386698381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGTTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	121601244	121631945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693
ES.27036.3	chr5	+	1357	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	34	-25	34	-2	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCGTCATTTGCAAGC	NA	False	NA	NA	False	AATAAA	-16	NA	121601248	121633482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ES.27037.1	chr5	+	159	1	Intergenic	novelGene_22528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATTAACAA	4748	False	NA	NA	False	NA	NA	NA	121665634	121665793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121665600_121665800
ES.27037.2	chr5	+	301	1	Intergenic	novelGene_22529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAATAAAAAAAAAAAAAAAA	4750	False	NA	NA	False	NA	NA	NA	121665636	121665937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121665600_121665900
ES.27038.1	chr5	-	1890	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	46	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	65.054294435416	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGATTTAAGTTCAAAG	NA	False	NA	9	True	AATAAA	-35	NA	121683922	121663095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683452_121683754
ES.27038.10	chr5	-	1107	9	NNC	ENSMUSG00000029454.16	novel	975	9	NA	NA	1226	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	60.8788499809252	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	1300	False	NA	-10	True	AATAAA	-16	NA	121672688	121663114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121672613
ES.27038.13	chr5	-	3620	12	NIC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	53.9128467187767	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683966	121663114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121663303_121663725_121663831_121664801_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.15	chr5	-	2823	12	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	187	-2	intron_retention	FALSE	non_canonical	1	3	junction_11	66.8204699670061	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTGCTTAAAGTTGC	NA	False	NA	-12	True	AATAAA	-14	NA	121683781	121663116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121676455_121676554_121677234_121677311_121678564_121678639_121683227_121683455_121683754
ES.27038.16	chr5	-	2971	10	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	266	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	76.2905427532158	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTGCTTAAAGTTGC	NA	False	NA	-12	True	AATAAA	-14	NA	121683702	121663116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121665285_121666932_121667071_121669595_121669784_121671371_121671453_121672397_121672494_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.17	chr5	-	2369	1	Genic_Genomic	ENSMUSG00000105340.6_ENSMUSG00000029454.16	novel	NA	NA	NA	NA	-27	-9157	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAAAAACCGGAACTT	NA	False	NA	NA	False	NA	NA	NA	121683995	121681626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_121681600_121684000
ES.27038.18	chr5	-	2045	2	NNC	ENSMUSG00000029454.16	novel	592	7	NA	NA	-48	-9188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121684016	121681657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121683458_121683771
ES.27038.2	chr5	-	2275	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	-45	4	-45	-4	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATATAGATTTA	NA	False	NA	0	True	AATAAA	-26	NA	121684013	121663104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.3	chr5	-	3233	12	NIC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	191	-1	intron_retention	FALSE	canonical	0	0	junction_7	54.5612098457751	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTTAAAGTTGCTATAT	NA	False	NA	-7	True	AATAAA	-19	NA	121683777	121663111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121663303_121663725_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.4	chr5	-	2111	15	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	197	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	75.6336835122596	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTAAAGTTGCTAT	NA	False	NA	-9	True	AATAAA	-17	NA	121683771	121663113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673737_121673825_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.5	chr5	-	2039	14	FSM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	-529	3	176	1	multi-exon	TRUE	canonical	0	0	junction_9	58.7492918250155	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTAAAGTTGCTAT	NA	False	NA	-9	True	AATAAA	-17	NA	121683792	121663113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.6	chr5	-	963	8	NNC	ENSMUSG00000029454.16	novel	975	9	NA	NA	2006	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.9993815679127	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	2080	False	NA	-10	True	AATAAA	-16	NA	121671908	121663114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121671881
ES.27038.7	chr5	-	1971	14	NIC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	187	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	66.5841106194432	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683781	121663114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665215_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ES.27038.8	chr5	-	1974	14	NNC	ENSMUSG00000029454.16	novel	2234	14	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	65.9131578571246	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683764	121663114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675176_121675284_121676455_121676514_121677234_121677311_121678564_121678639_121683227
ES.27039.1	chr5	+	176	1	Intergenic	novelGene_22530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATAAGCCGGGCGT	NA	False	NA	NA	False	NA	NA	NA	121701984	121702160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121702000_121702200
ES.2704.1	chr10	-	1323	1	Intergenic	novelGene_2064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACAAATACATACCAA	NA	False	NA	NA	False	NA	NA	NA	43297381	43296058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43296100_43297400
ES.27040.1	chr5	+	104	1	Intergenic	novelGene_22531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAAAAAACCTAT	2989	False	NA	NA	False	NA	NA	NA	121718118	121718222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121718100_121718200
ES.27041.1	chr5	-	2330	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	-116	1653	-116	198	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGAGTCTTATCTCT	NA	False	NA	0	True	AATAAA	-42	NA	121732003	121705742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.10	chr5	-	1964	13	NNC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	14	169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	300.456076934161	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACGGGGTCAGTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	121731629	121705771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121717666_121717808_121718095_121718213_121718676_121718782_121731424
ES.27041.12	chr5	-	3563	10	NIC	ENSMUSG00000029455.15	novel	1799	11	NA	NA	93	602	intron_retention	FALSE	canonical	3	476	junction_7	68.4496751248051	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGTGTGCGCGTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	121731550	121707776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.13	chr5	-	1090	6	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	17610	-2	-843	2	3prime_fragment	FALSE	canonical	3	622	junction_5	34.3021865192294	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTCTGGCAGGCCTTC	NA	False	NA	NA	False	NA	NA	NA	121714033	121708376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958
ES.27041.14	chr5	-	179	1	Intergenic	novelGene_22532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	121727661	121727482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121727500_121727700
ES.27041.3	chr5	-	3223	12	NIC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	-16	178	intron_retention	FALSE	canonical	3	476	junction_9	96.282813447101	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGTTCTCTAAGACGT	NA	False	NA	-20	True	AATAAA	-22	NA	121731661	121705762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121706087_121706988_121707104_121708666_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.4	chr5	-	5670	10	NIC	ENSMUSG00000029455.15	novel	1799	11	NA	NA	-4	172	intron_retention	FALSE	canonical	3	476	junction_7	68.4496751248051	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731649	121705768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.5	chr5	-	4553	10	NIC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	7	169	intron_retention	FALSE	canonical	3	476	junction_7	73.0257860765549	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACGGGGTCAGTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	121731636	121705771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121706087_121706988_121708825_121710079_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.6	chr5	-	6161	9	NIC	ENSMUSG00000029455.15	novel	1799	11	NA	NA	-4	169	intron_retention	FALSE	canonical	3	476	junction_6	60.1153838463999	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACGGGGTCAGTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	121731649	121705771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.8	chr5	-	4124	11	NIC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	-24	169	intron_retention	FALSE	canonical	3	476	junction_8	97.976987093909	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACGGGGTCAGTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	121731669	121705771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121707104_121708666_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27041.9	chr5	-	1393	9	NNC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	-8	169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	239.247779509027	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACGGGGTCAGTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	121731653	121705771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121714546_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ES.27042.1	chr5	-	170	1	Antisense	novelGene_ENSMUSG00000106590.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGAAGCCAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	121732951	121732781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121732800_121733000
ES.27043.1	chr5	+	2031	1	Antisense	novelGene_ENSMUSG00000042647.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAATAAAAAAAA	152	False	NA	NA	False	NA	NA	NA	121738999	121741030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121739000_121741000
ES.27043.2	chr5	+	1371	2	Antisense	novelGene_ENSMUSG00000042647.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCCTCCTAGATTGCC	152	False	NA	NA	False	NA	NA	NA	121738999	121741066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121739111_121739806
ES.27044.1	chr5	+	2190	1	Antisense	novelGene_ENSMUSG00000042647.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3494	False	NA	NA	False	NA	NA	NA	121751665	121753855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121751700_121753900
ES.27045.1	chr5	-	3825	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-35	2	intron_retention	FALSE	canonical	0	0	junction_1	16.3110265396406	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTTGATCATGATGT	NA	False	NA	2	True	NA	NA	NA	121757036	121734835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752364_121756833
ES.27045.10	chr5	-	2249	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7846483061999	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGCATCTATGGCTTT	NA	False	NA	NA	False	GATAAA	-19	NA	121757006	121736340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ES.27045.11	chr5	-	2235	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-59	-1376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4723660405907	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCAGGCATCTATGGC	NA	False	NA	NA	False	GATAAA	-16	NA	121757060	121736343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752364_121756939
ES.27045.12	chr5	-	2114	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4723660405907	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGACTCAGGCATCTAT	NA	False	NA	NA	False	GATAAA	-13	NA	121757006	121736346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756962
ES.27045.13	chr5	-	2311	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4723660405907	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACTGCTCCATGACTC	NA	False	NA	93	True	GATAAA	-3	NA	121757006	121736356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752401_121756833
ES.27045.14	chr5	-	2176	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-4	-1486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3110265396406	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCTGTCTACTTCCT	NA	False	NA	-4	True	NA	NA	NA	121757005	121736453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752364_121756833
ES.27045.15	chr5	-	2253	11	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	3	-1490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.4571781478959	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAAGAATCTGTCTACT	NA	False	NA	-8	True	NA	NA	NA	121756998	121736457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748225_121752122_121752323_121756833
ES.27045.16	chr5	-	2022	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	-1490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3110265396406	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAAGAATCTGTCTACT	NA	False	NA	-8	True	NA	NA	NA	121757006	121736457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756943
ES.27045.2	chr5	-	3753	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_1	13.7846483061999	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGATCATGATG	NA	False	NA	1	True	NA	NA	NA	121757006	121734836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ES.27045.3	chr5	-	3712	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_1	18.5396604139467	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGATCATGATG	NA	False	NA	1	True	NA	NA	NA	121757006	121734836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745236_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752401_121756941
ES.27045.4	chr5	-	3862	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	18	1	18	-1	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGATCATGA	NA	False	NA	-1	True	NA	NA	NA	121756983	121734838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ES.27045.5	chr5	-	3669	13	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7597782143309	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGATCATGA	NA	False	NA	-1	True	NA	NA	NA	121757036	121734838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121735829_121735875_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752364_121756939
ES.27045.7	chr5	-	2853	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-4	-658	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3110265396406	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTATCACATCACATGT	NA	False	NA	NA	False	TATAAA	-8	NA	121757005	121735625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756943
ES.27045.8	chr5	-	2175	12	NNC	ENSMUSG00000042647.14	novel	3881	11	NA	NA	-41	-1373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3110265396406	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGCATCTATGGCTTT	NA	False	NA	NA	False	GATAAA	-19	NA	121757042	121736340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121736569_121736702_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756943
ES.27045.9	chr5	-	2382	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	-4	1503	-4	-1373	multi-exon	FALSE	canonical	3	24	junction_8	9.91413132856328	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGCATCTATGGCTTT	NA	False	NA	NA	False	GATAAA	-19	NA	121757005	121736340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ES.27046.1	chr5	+	1948	1	Intergenic	novelGene_22533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAGAAAAAAT	4047	False	NA	NA	False	NA	NA	NA	121757104	121759052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121757100_121759100
ES.27047.1	chr5	+	160	1	Intergenic	novelGene_22534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8908	False	NA	NA	False	NA	NA	NA	121761965	121762125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121762000_121762100
ES.27048.1	chr5	+	2116	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	-30	1658	-30	-1645	multi-exon	TRUE	canonical	3	111	junction_6	24.4408545656822	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTGGCTCCTTCATTT	877	False	NA	NA	False	NA	NA	NA	121798595	121823661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.10	chr5	+	3533	11	FSM	ENSMUSG00000029458.15	ENSMUST00000140996.6	3524	11	-4	-5	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	42.9702222475053	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACGTTTGAGTCTGAA	914	False	NA	12	True	AATAAA	-22	NA	121798632	121825311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121798912_121800062_121800225_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.11	chr5	+	3764	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.6590090869963	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	924	False	NA	9	True	AATAAA	-19	NA	121798642	121825308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801304_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822542_121823201
ES.27048.12	chr5	+	2271	3	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-12	-20	intron_retention	FALSE	canonical	2	2	junction_2	91.5	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATACAA	933	False	NA	NA	False	NA	NA	NA	121798651	121803684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121801555_121803165
ES.27048.13	chr5	+	3695	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.3534388619522	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTACGTTTGAGT	937	False	NA	7	True	AATAAA	-17	NA	121798655	121825306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801364_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.14	chr5	+	3576	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.1198592866192	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTACGTTTGAGT	941	False	NA	7	True	AATAAA	-17	NA	121798659	121825306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801358_121801434_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.15	chr5	+	3737	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	43.1050993129219	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTACGTTTGAGT	946	False	NA	7	True	AATAAA	-17	NA	121798664	121825306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801313_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.17	chr5	+	4800	11	NIC	ENSMUSG00000029458.15	novel	3524	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	111	junction_5	22.8394395728091	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTTACGTTTGAGT	972	False	NA	7	True	AATAAA	-17	NA	121798690	121825306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121798912_121800062_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.19	chr5	+	3734	2	FSM	ENSMUSG00000029458.15	ENSMUST00000132491.2	2222	2	151	-1663	-117	-5	multi-exon	FALSE	canonical	3	185	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTACATTGGCCTTTT	1096	False	NA	NA	False	NA	NA	NA	121798814	121803699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121798912_121800062
ES.27048.2	chr5	+	3766	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	-30	8	-30	0	multi-exon	FALSE	canonical	3	111	junction_6	24.4408545656822	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACGTTTGAGTCTGAA	877	False	NA	12	True	AATAAA	-22	NA	121798595	121825311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.20	chr5	+	5597	7	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-7257	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7034523373843	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	NA	False	NA	9	True	AATAAA	-19	NA	121813733	121825308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121813987_121814118_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.21	chr5	+	6167	1	FSM	ENSMUSG00000029458.15	ENSMUST00000196897.2	4318	1	-1848	-1	-1848	1	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTACGTTTGAGTCTG	NA	False	NA	10	True	AATAAA	-20	NA	121819142	121825309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121819100_121825300
ES.27048.3	chr5	+	1174	4	ISM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	-7	21635	-7	-20	5prime_fragment	FALSE	canonical	3	161	junction_3	9.97775303139718	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATACAA	900	False	NA	NA	False	NA	NA	NA	121798618	121803684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161
ES.27048.4	chr5	+	1199	4	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	0	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.6938866743962	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAATAC	907	False	NA	NA	False	NA	NA	NA	121798625	121803682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801358_121801555_121803127
ES.27048.5	chr5	+	3669	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	41.6256437172572	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTACGTTTGAGTCT	912	False	NA	9	True	AATAAA	-19	NA	121798630	121825308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801417_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.6	chr5	+	3783	12	NIC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	41.136740329767	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACGTTTGAGTCTGAA	914	False	NA	12	True	AATAAA	-22	NA	121798632	121825311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121798912_121800062_121800225_121801304_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.7	chr5	+	3657	12	NNC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	53.7135038502216	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAAAGAGTTACGTTTGA	914	False	NA	5	True	AATAAA	-15	NA	121798632	121825304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121798912_121800062_121800225_121801417_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820848_121820933_121822433_121822538_121823191
ES.27048.8	chr5	+	3603	11	NIC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	47.8958244526598	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGGTCAAAGAGTTACG	914	False	NA	0	True	AATAAA	-10	NA	121798632	121825299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ES.27048.9	chr5	+	8083	10	NIC	ENSMUSG00000029458.15	novel	3744	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	111	junction_6	26.8401762611276	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACGTTTGAGTCTGAA	914	False	NA	12	True	AATAAA	-22	NA	121798632	121825311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121822538_121823191
ES.27049.1	chr5	-	3658	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	-30	-2	-30	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTGAGCTAGATTT	NA	False	NA	-5	True	NA	NA	NA	121798607	121759088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.11	chr5	-	3456	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	15.3653565798352	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTGTTCTGAGCTAGA	NA	False	NA	-8	True	NA	NA	NA	121798567	121759091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.14	chr5	-	3229	19	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	15.7867736482862	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATATCCTGTTCTGAGC	NA	False	NA	-12	True	NA	NA	NA	121798534	121759095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121798355
ES.27049.16	chr5	-	3437	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	15.3120813018679	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATCCTGTTCTGAG	NA	False	NA	-13	True	NA	NA	NA	121798553	121759096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.17	chr5	-	3857	19	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	-15	-1004	intron_retention	FALSE	canonical	3	24	junction_8	13.1186419050182	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTTCCATGGCCTATC	NA	False	NA	NA	False	ATTAAA	-6	NA	121798592	121760095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.18	chr5	-	5691	2	NNC	ENSMUSG00000029456.13	novel	412	4	NA	NA	4775	4360	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTATAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	121780072	121774162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121775866_121776084
ES.27049.19	chr5	-	204	1	Intergenic	novelGene_22535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGAAAAGGAAGGCACA	NA	False	NA	NA	False	NA	NA	NA	121776080	121775876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121775900_121776100
ES.27049.20	chr5	-	4687	8	NNC	ENSMUSG00000029456.13	novel	412	4	NA	NA	5	2126	intron_retention	TRUE	non_canonical	0	0	junction_1	11.9574074044809	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTATTTTTACTATG	NA	False	NA	NA	False	NA	NA	NA	121798572	121776396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121776477_121778549_121780744_121783431_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.21	chr5	-	7846	7	NNC	ENSMUSG00000029456.13	novel	3826	21	NA	NA	961	2097	intron_retention	FALSE	non_canonical	0	0	junction_1	12.8894875339902	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	121797581	121776425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121776710_121778682_121780744_121783431_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076
ES.27049.3	chr5	-	3661	21	NIC	ENSMUSG00000029456.13	novel	3826	21	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	15.036954478883	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTTCTGAGCTAGATT	NA	False	NA	-6	True	NA	NA	NA	121798570	121759089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794318_121798355
ES.27049.4	chr5	-	3765	21	NNC	ENSMUSG00000029456.13	novel	3826	21	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	16.8748333325103	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTTCTGAGCTAGATT	NA	False	NA	-6	True	NA	NA	NA	121798572	121759089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786159_121787416_121787612_121790018_121790168_121794076_121794318_121798355
ES.27049.5	chr5	-	3208	20	NNC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.2318393704399	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTTCTGAGCTAGATT	NA	False	NA	-6	True	NA	NA	NA	121798572	121759089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769486_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.6	chr5	-	3684	21	NNC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.0049991669443	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798572	121759090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777432_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.7	chr5	-	3448	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	15.4450146148941	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798548	121759090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121794076_121794277_121798355
ES.27049.8	chr5	-	3537	20	NIC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	15.372746327182	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798557	121759090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ES.27049.9	chr5	-	3837	22	NNC	ENSMUSG00000029456.13	novel	3626	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.1453701861716	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798557	121759090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768846_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786159_121787416_121787612_121790018_121790168_121794076_121794277_121794513_121794646_121798355
ES.2705.1	chr10	+	736	3	NNC	ENSMUSG00000038240.14	novel	1467	8	NA	NA	62377	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	43332293	43340878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43332589_43336655_43336839_43340620
ES.27050.1	chr5	-	4977	1	Intergenic	novelGene_22536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGGAAAAAAACAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	121809797	121804820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121804800_121809800
ES.27051.1	chr5	+	202	1	Intergenic	novelGene_22537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTCGGGAG	8914	False	NA	NA	False	NA	NA	NA	121846202	121846404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121846200_121846400
ES.27052.1	chr5	+	6514	22	NIC	ENSMUSG00000042605.17	novel	3294	19	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_9	71.2370129787921	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	349	False	NA	4	True	TTTAAA	-7	NA	121849378	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121849587_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ES.27052.10	chr5	+	4460	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.4990588520743	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	600	False	NA	4	True	TTTAAA	-7	NA	121849629	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.11	chr5	+	4513	25	FSM	ENSMUSG00000042605.17	ENSMUST00000051950.14	4472	25	-41	0	-41	0	multi-exon	FALSE	canonical	0	0	junction_9	70.6657699432099	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	601	False	NA	4	True	TTTAAA	-7	NA	121849630	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.12	chr5	+	4448	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.6288233911142	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	606	False	NA	4	True	TTTAAA	-7	NA	121849635	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.13	chr5	+	4257	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.0259987326855	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	634	False	NA	4	True	TTTAAA	-7	NA	121849663	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.14	chr5	+	4283	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.1456611745913	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	662	False	NA	4	True	TTTAAA	-7	NA	121849691	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.15	chr5	+	3998	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	122	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	70.705033866472	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	764	False	NA	2	True	TTTAAA	-5	NA	121849793	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.16	chr5	+	6059	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-125	-1	intron_retention	FALSE	canonical	0	0	junction_9	69.7160864020178	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	768	False	NA	-49	True	NA	NA	NA	121849797	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121951617_121952400
ES.27052.17	chr5	+	9649	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-113	3445	intron_retention	FALSE	canonical	0	0	junction_9	79.4260126997682	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTGGTGGTCAGTTCT	780	False	NA	NA	False	ATTAAA	-15	NA	121849809	121958001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121951617_121953143_121953280_121953927
ES.27052.18	chr5	+	3926	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-89	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	69.7815184519534	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	804	False	NA	-49	True	NA	NA	NA	121849833	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.19	chr5	+	5031	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-85	-1	intron_retention	FALSE	canonical	0	0	junction_9	71.3471769570132	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	808	False	NA	-49	True	NA	NA	NA	121849837	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447
ES.27052.2	chr5	+	3891	24	NIC	ENSMUSG00000042605.17	novel	3294	19	NA	NA	37	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	69.8301476971817	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	407	False	NA	1	True	TTTAAA	-4	NA	121849436	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121849587_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.20	chr5	+	5019	22	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-78	-1	intron_retention	FALSE	canonical	0	0	junction_9	72.5885806502395	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	815	False	NA	-49	True	NA	NA	NA	121849844	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933128_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.21	chr5	+	4283	25	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.075703112182	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	825	False	NA	4	True	TTTAAA	-7	NA	121849854	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.23	chr5	+	4025	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	59.7598499782378	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	825	False	NA	4	True	TTTAAA	-7	NA	121849854	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.24	chr5	+	4153	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.7901074547281	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	826	False	NA	-49	True	NA	NA	NA	121849855	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121927739_121927887_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.25	chr5	+	3872	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-65	25	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.0259987326855	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGACAGAAGTTCAGT	828	False	NA	NA	False	TTTAAA	-35	NA	121849857	121952822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.26	chr5	+	3949	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	69.0351712917658	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	828	False	NA	4	True	TTTAAA	-7	NA	121849857	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.27	chr5	+	4138	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-65	-77	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	79.6302419017474	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGATATTGCTTATATC	828	False	NA	NA	False	NA	NA	NA	121849857	121954479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121953143_121953280_121953927
ES.27052.28	chr5	+	4275	25	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.7057752036488	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	829	False	NA	-49	True	NA	NA	NA	121849858	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951227_121951331_121951447_121951617_121952400
ES.27052.29	chr5	+	4073	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-64	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	72.1855150444369	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	829	False	NA	2	True	TTTAAA	-5	NA	121849858	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.3	chr5	+	3690	23	NIC	ENSMUSG00000042605.17	novel	3294	19	NA	NA	70	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.1703358482618	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	440	False	NA	2	True	TTTAAA	-5	NA	121849469	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121849587_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.33	chr5	+	5003	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-58	0	intron_retention	FALSE	canonical	0	0	junction_9	58.3293760956045	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	835	False	NA	4	True	TTTAAA	-7	NA	121849864	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447
ES.27052.34	chr5	+	3845	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	59.3058867956359	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCAGTTAGTGTGTGTT	835	False	NA	3	True	TTTAAA	-6	NA	121849864	121953012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.35	chr5	+	3999	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	79.9535634856232	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	838	False	NA	4	True	TTTAAA	-7	NA	121849867	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.36	chr5	+	6778	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-55	0	intron_retention	FALSE	canonical	0	0	junction_9	57.3407288380037	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	838	False	NA	4	True	TTTAAA	-7	NA	121849867	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ES.27052.37	chr5	+	6821	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-50	0	intron_retention	FALSE	canonical	0	0	junction_9	70.9708501446047	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	843	False	NA	4	True	TTTAAA	-7	NA	121849872	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447
ES.27052.38	chr5	+	3889	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	72.7423421887654	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	846	False	NA	4	True	TTTAAA	-7	NA	121849875	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.39	chr5	+	4195	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.3023984027005	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	848	False	NA	1	True	TTTAAA	-4	NA	121849877	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887155_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.4	chr5	+	4614	23	NIC	ENSMUSG00000042605.17	novel	3294	19	NA	NA	98	-2	intron_retention	FALSE	canonical	0	0	junction_9	71.0888746511967	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	468	False	NA	1	True	TTTAAA	-4	NA	121849497	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121849587_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447
ES.27052.41	chr5	+	4035	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-33	57	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.6288233911142	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTGACGGATTATTAT	860	False	NA	NA	False	AGTAAA	-10	NA	121849889	121952854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.42	chr5	+	4013	23	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.0259987326855	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	861	False	NA	-49	True	NA	NA	NA	121849890	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919359_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.43	chr5	+	3930	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.8629343587483	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	861	False	NA	-49	True	NA	NA	NA	121849890	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.44	chr5	+	7563	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_9	73.7397519687188	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	865	False	NA	4	True	TTTAAA	-7	NA	121849894	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.47	chr5	+	4079	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	69.4348496585644	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	870	False	NA	1	True	TTTAAA	-4	NA	121849899	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.48	chr5	+	4043	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.5101879215807	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	871	False	NA	-49	True	NA	NA	NA	121849900	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121850987_121851064_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.49	chr5	+	4205	25	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.7145950668174	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	871	False	NA	-49	True	NA	NA	NA	121849900	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924381_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.5	chr5	+	3622	23	NIC	ENSMUSG00000042605.17	novel	3294	19	NA	NA	132	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.866260374766	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAAAACTGATACCCA	502	False	NA	-10	True	NA	NA	NA	121849531	121952999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121849587_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.52	chr5	+	4083	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.8895267474526	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACCCAGTTAGTGTGT	871	False	NA	0	True	TTTAAA	-3	NA	121849900	121953009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952381
ES.27052.53	chr5	+	3407	21	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.2555636145175	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAAGAAAGGAGG	871	False	NA	NA	False	AAAACA	-29	NA	121849900	121941370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121927739_121927887_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010
ES.27052.54	chr5	+	3796	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	61.1602111553862	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	871	False	NA	4	True	TTTAAA	-7	NA	121849900	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.57	chr5	+	3622	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-550	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	79.6302419017474	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGTGCTGGTGACTT	871	False	NA	NA	False	NA	NA	NA	121849900	121954006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121953143_121953280_121953927
ES.27052.58	chr5	+	3729	23	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.1533664546664	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATACCCAGTTAGTGTGT	871	False	NA	0	True	TTTAAA	-3	NA	121849900	121953009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933125_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.59	chr5	+	4031	23	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.7931418165718	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	871	False	NA	2	True	TTTAAA	-5	NA	121849900	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952381
ES.27052.6	chr5	+	4337	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-92	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.0768837723033	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTAGTGTGTGTTTAT	550	False	NA	6	True	TTTAAA	-9	NA	121849579	121953015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.63	chr5	+	6628	21	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_9	69.2809497625429	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	875	False	NA	1	True	TTTAAA	-4	NA	121849904	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917664_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ES.27052.64	chr5	+	5780	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_8	69.5693588558208	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	877	False	NA	-49	True	NA	NA	NA	121849906	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121951617_121952400
ES.27052.65	chr5	+	3832	23	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.6085692503533	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	877	False	NA	-49	True	NA	NA	NA	121849906	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917659_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933128_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.66	chr5	+	2763	15	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	68.7103132204849	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	877	False	NA	-49	True	NA	NA	NA	121849906	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.67	chr5	+	3866	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.6036769696072	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	877	False	NA	-49	True	NA	NA	NA	121849906	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850193_121883781_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.68	chr5	+	2569	10	FSM	ENSMUSG00000042605.17	ENSMUST00000225761.2	1434	10	-16	-1119	-16	-765	multi-exon	FALSE	canonical	0	0	junction_9	75.293663760433	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGCTACTGTTAAATT	877	False	NA	NA	False	AATAAA	-3	NA	121849906	121920620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395
ES.27052.69	chr5	+	4378	26	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.4281827033679	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	877	False	NA	4	True	TTTAAA	-7	NA	121849906	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121927739_121927887_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.7	chr5	+	4354	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.5151447085683	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	585	False	NA	4	True	TTTAAA	-7	NA	121849614	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
ES.27052.70	chr5	+	4121	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	78.4708294686932	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	877	False	NA	2	True	TTTAAA	-5	NA	121849906	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.73	chr5	+	3767	22	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.0637049673807	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	879	False	NA	-49	True	NA	NA	NA	121849908	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910849_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.74	chr5	+	4123	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	71	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	57.6288233911142	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	964	False	NA	1	True	TTTAAA	-4	NA	121849993	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919359_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.75	chr5	+	3641	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	141	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.3244891254611	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	1034	False	NA	4	True	TTTAAA	-7	NA	121850063	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.77	chr5	+	3678	24	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	359	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.1008544807458	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	1252	False	NA	4	True	TTTAAA	-7	NA	121850281	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121937769_121937815_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ES.27052.78	chr5	+	1730	1	Intergenic	novelGene_22538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121869671	121871401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121869700_121871400
ES.27052.79	chr5	+	162	1	Intergenic	novelGene_22539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	121875053	121875215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_121875100_121875200
ES.27052.8	chr5	+	7019	22	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-51	0	intron_retention	FALSE	canonical	0	0	junction_9	56.2918778351201	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	591	False	NA	4	True	TTTAAA	-7	NA	121849620	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ES.27052.80	chr5	+	3227	19	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-1222	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	74.9281136972113	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	NA	False	NA	-49	True	NA	NA	NA	121886036	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.81	chr5	+	5475	1	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-4873	-2908	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121911118	121916593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121911100_121916600
ES.27052.82	chr5	+	4950	11	ISM	ENSMUSG00000042605.17	ENSMUST00000161064.8	3294	19	36018	52	140	-1	intron_retention	FALSE	canonical	3	115	junction_7	42.0434299266841	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	NA	False	NA	-49	True	NA	NA	NA	121923276	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447
ES.27052.83	chr5	+	2442	14	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	140	-1	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	69.1958886489447	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAACTAAAAAAAA	NA	False	NA	-49	True	NA	NA	NA	121923276	121952960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27052.84	chr5	+	5051	12	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	140	0	intron_retention	FALSE	canonical	3	47	junction_9	72.2186761861684	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	NA	False	NA	4	True	TTTAAA	-7	NA	121923276	121953013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447
ES.27052.85	chr5	+	7645	8	ISM	ENSMUSG00000042605.17	ENSMUST00000162327.8	2343	14	12506	-5379	-946	3606	intron_retention	FALSE	canonical	3	113	junction_7	54.0018896116854	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTCCTTGTACTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	121934475	121958162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447
ES.27052.86	chr5	+	4248	7	ISM	ENSMUSG00000042605.17	ENSMUST00000051950.14	4472	25	85667	3	-83	-2	intron_retention	FALSE	canonical	3	47	junction_4	85.2916564891705	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACCCAGTTAGTGTGTG	NA	False	NA	1	True	TTTAAA	-4	NA	121935338	121953010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447
ES.27052.87	chr5	+	4399	1	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-170	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATATAAAATAAAAACTAAA	NA	False	NA	-54	True	NA	NA	NA	121948556	121952955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121948600_121953000
ES.27052.9	chr5	+	4548	25	NNC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.6657699432099	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCCAGTTAGTGTGTGT	600	False	NA	2	True	TTTAAA	-5	NA	121849629	121953011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919359_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ES.27053.1	chr5	-	1484	10	Antisense	novelGene_ENSMUSG00000105179.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCGCAGGGTGGCGAG	NA	False	NA	NA	False	AAAACA	-3	NA	121919533	121849906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121850336_121883781_121883818_121885465_121885533_121885987_121886058_121887139_121887291_121910727_121910851_121915431_121915525_121915970_121916165_121917476_121917658_121919393
ES.27053.3	chr5	-	4681	2	NNC	ENSMUSG00000089729.2	novel	685	2	NA	NA	4011	2560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCCCGATTAAAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	121861455	121853168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121856156_121859761
ES.27053.4	chr5	-	216	1	Intergenic	novelGene_22540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCTGGAGGATCCGGC	NA	False	NA	NA	False	NA	NA	NA	121876708	121876492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121876500_121876700
ES.27053.5	chr5	-	2569	1	Antisense	novelGene_ENSMUSG00000042605.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6545	False	NA	NA	False	ATTAAA	-26	NA	121888801	121886232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121886200_121888800
ES.27054.1	chr5	-	2592	1	Antisense	novelGene_ENSMUSG00000042605.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTTCCTACCATACA	NA	False	NA	NA	False	NA	NA	NA	121943749	121941157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_121941200_121943700
ES.27055.1	chr5	-	4071	8	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-29	12	intron_retention	FALSE	canonical	3	8	junction_7	16.67088382021	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTGCATCCACACACCC	NA	False	NA	-8	True	ATTAAA	-25	NA	121975738	121953538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
ES.27055.10	chr5	-	4188	8	NNC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-13	2	intron_retention	FALSE	canonical	0	0	junction_1	17.9557278678784	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCATGATCTCTGCAT	NA	False	NA	-18	True	ATTAAA	-15	NA	121974935	121953548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121956063_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ES.27055.11	chr5	-	4426	9	NNC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-1368	1	intron_retention	FALSE	canonical	0	0	junction_8	20.9165006633519	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACCATGATCTCTGCA	NA	False	NA	-19	True	ATTAAA	-14	NA	121977077	121953549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121976697
ES.27055.12	chr5	-	4126	7	NIC	ENSMUSG00000042594.17	novel	4313	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	8	junction_6	16.86877457184	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAACCATGATCTCTGC	NA	False	NA	-20	True	ATTAAA	-13	NA	121975725	121953550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975636
ES.27055.13	chr5	-	4041	4	NIC	ENSMUSG00000042594.17	novel	4313	7	NA	NA	-144	-4	intron_retention	FALSE	canonical	3	36	junction_2	5.43650214343336	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTATTACAACCATGATCT	NA	False	NA	-24	True	ATTAAA	-9	NA	121966948	121953554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121956918_121957001_121957094_121957169_121957272_121966464
ES.27055.14	chr5	-	2595	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	32	1568	-2	0	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTACTAGGACCCCC	NA	False	NA	60	True	ATTAAA	-14	NA	121974890	121955278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
ES.27055.15	chr5	-	2556	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-28	2	-19	-2	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCCCTACTAGGACCC	NA	False	NA	58	True	ATTAAA	-12	NA	121974941	121955280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ES.27055.16	chr5	-	2334	9	NNC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-1068	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.9165006633519	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTGTTTTGTTTT	NA	False	NA	-3	True	TTTAAA	-17	NA	121976777	121955341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121976697
ES.27055.17	chr5	-	3776	1	Intergenic	novelGene_22541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATCCACCTGCCT	NA	False	NA	NA	False	NA	NA	NA	121963818	121960042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121960000_121963800
ES.27055.18	chr5	-	4979	1	Intergenic	novelGene_22542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCAGGTGGCCTCGTGA	NA	False	NA	NA	False	NA	NA	NA	121965500	121960521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_121960500_121965500
ES.27055.19	chr5	-	3518	2	ISM	ENSMUSG00000042594.17	ENSMUST00000118580.6	2393	8	153	8384	153	2894	5prime_fragment	FALSE	canonical	3	25	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTCATTCTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121974727	121963736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_121967140_121974612
ES.27055.2	chr5	-	4323	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-54	-1739	-45	11	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCTGCATCCACACACC	NA	False	NA	-9	True	ATTAAA	-24	NA	121974967	121953539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ES.27055.3	chr5	-	4410	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	-45	-170	-45	10	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCTGCATCCACACAC	NA	False	NA	-10	True	ATTAAA	-23	NA	121974967	121953540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
ES.27055.4	chr5	-	4059	8	NNC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	-15	7	intron_retention	FALSE	canonical	0	0	junction_7	19.1673617146972	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	-13	True	ATTAAA	-20	NA	121975724	121953543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121975629
ES.27055.5	chr5	-	4327	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	-7	-7	-7	7	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGATCTCTGCATCCACA	NA	False	NA	-13	True	ATTAAA	-20	NA	121974895	121953543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ES.27055.6	chr5	-	4212	8	NIC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-9	5	intron_retention	FALSE	canonical	1	1	junction_7	20.6842146259866	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGATCTCTGCATCCA	NA	False	NA	-15	True	ATTAAA	-18	NA	121975718	121953545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121975636
ES.27055.7	chr5	-	4243	7	NIC	ENSMUSG00000042594.17	novel	2530	8	NA	NA	64	5	intron_retention	FALSE	canonical	3	25	junction_6	12.7725834852973	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGATCTCTGCATCCA	NA	False	NA	-15	True	ATTAAA	-18	NA	121974816	121953545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121956157_121956278_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ES.27055.9	chr5	-	4606	8	NNC	ENSMUSG00000042594.17	novel	4195	9	NA	NA	-35	3	intron_retention	FALSE	canonical	0	0	junction_7	20.9264991660559	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGATCTCTGCATC	NA	False	NA	-17	True	ATTAAA	-16	NA	121974957	121953547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974479
ES.27056.1	chr5	+	2406	4	NNC	ENSMUSG00000044134.10	novel	2335	3	NA	NA	-815	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.704266871026	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGGGTGTATTATT	4598	False	NA	1	True	AATAAA	-12	NA	121986231	121992664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121986398_121988532_121988610_121989230_121989343_121990613
ES.27056.2	chr5	+	3023	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	-648	-7	-637	7	multi-exon	FALSE	canonical	3	24	junction_1	9.62635271879577	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTATTATTGTTCT	4776	False	NA	6	True	AATAAA	-17	NA	121986409	121992669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
ES.27056.3	chr5	+	4359	2	NIC	ENSMUSG00000044134.10	novel	2368	4	NA	NA	-9	5	intron_retention	FALSE	canonical	3	47	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGTGTATTATTGTT	5404	False	NA	4	True	AATAAA	-15	NA	121987037	121992667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121989343_121990613
ES.27056.4	chr5	+	2323	4	NNC	ENSMUSG00000044134.10	novel	2368	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4384373412506	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGGGTGTATTATT	5422	False	NA	1	True	AATAAA	-12	NA	121987055	121992664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_121987188_121988532_121988610_121989230_121989294_121990613
ES.27056.5	chr5	+	2289	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	15	31	4	2	multi-exon	FALSE	canonical	2	8	junction_1	19.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGGGTGTATTATT	5428	False	NA	1	True	AATAAA	-12	NA	121987061	121992664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_121987188_121989230_121989343_121990613
ES.27056.6	chr5	+	3037	2	NIC	ENSMUSG00000044134.10	novel	2368	4	NA	NA	27	455	intron_retention	FALSE	canonical	3	47	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCCTGTTTGCAATCCA	5461	False	NA	NA	False	NA	NA	NA	121987094	121991402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_121989343_121990613
ES.27057.1	chr5	-	611	2	Genic_Genomic	ENSMUSG00000104719.2	novel	1178	1	NA	NA	436	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATTAATAAGTATTAAA	NA	False	NA	NA	False	NA	NA	NA	121986471	121985730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_121986321_121986450
ES.27058.1	chr5	+	5626	3	Antisense	novelGene_ENSMUSG00000042589.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121999324	122008604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_121999442_122002704_122006678_122007068
ES.27058.2	chr5	+	2444	1	Antisense	novelGene_ENSMUSG00000042589.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACCAGTGGTTAATGA	NA	False	NA	NA	False	NA	NA	NA	122006199	122008643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122006200_122008600
ES.27058.3	chr5	+	947	4	Antisense	novelGene_ENSMUSG00000042589.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTTGAAAATGAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	122006229	122033993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122006276_122032423_122032559_122032796_122032893_122033323
ES.27059.1	chr5	+	3614	1	Intergenic	novelGene_22544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGGGGCGGGGCTAGAG	NA	False	NA	NA	False	NA	NA	NA	122147762	122151376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122147800_122151400
ES.2706.1	chr10	-	441	1	FSM	ENSMUSG00000094955.3	ENSMUST00000178135.3	75	1	-38	-328	-38	328	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGGCTGGACTGGGCA	NA	False	NA	NA	False	NA	NA	NA	43332535	43332094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_43332100_43332500
ES.27060.1	chr5	+	6629	1	Antisense	novelGene_ENSMUSG00000042589.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAAATAGGTAAAAATAAT	5329	False	NA	NA	False	NA	NA	NA	122176846	122183475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122176800_122183500
ES.27061.1	chr5	-	6812	23	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-41	1824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	3.7482778414706	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATCCTGGGTGTCCCCA	NA	False	NA	NA	False	AATACA	-10	NA	122188206	121996454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024024_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
ES.27061.10	chr5	-	4891	22	NIC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-38	-17	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	3.77844465235759	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCTTTGGAATTTATCC	NA	False	NA	NA	False	AATAAA	-38	NA	122188203	121998295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122188078
ES.27061.11	chr5	-	4681	21	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	10	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.39175363607751	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTCAGCTATTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122188155	121998319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122000164_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007620_122012250_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122188078
ES.27061.12	chr5	-	3681	18	NNC	ENSMUSG00000042589.19	novel	740	8	NA	NA	7917	-1464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24916030784899	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTTTGGCTTCCATG	NA	False	NA	NA	False	NA	NA	NA	122025527	121999834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122000164_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015220_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416
ES.27061.13	chr5	-	4408	20	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-371	-6071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.57739904588767	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTGTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	122188536	122004441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012374_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
ES.27061.14	chr5	-	3760	19	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-35	-6074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.97872428217642	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCGGCTGTTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	122188200	122004444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122005424_122006507_122006680_122007259_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122181832_122181908_122188078
ES.27061.15	chr5	-	3824	18	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-60	-6076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.17439882334357	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCCGGCTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	122188225	122004446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122017869_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122188078
ES.27061.16	chr5	-	3036	17	NIC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-36	938	combination_of_known_splicesites	FALSE	canonical	1	5	junction_10	2.1641612116476	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGCTGTCCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	122188201	122010213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
ES.27061.17	chr5	-	147	1	Intergenic	novelGene_22543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	122059811	122059664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122059700_122059800
ES.27061.2	chr5	-	2680	3	FSM	ENSMUSG00000042589.19	ENSMUST00000197179.2	1560	3	188	-1308	188	1216	multi-exon	FALSE	canonical	3	12	junction_2	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGGAACGTTCCGGAAC	NA	False	NA	NA	False	NA	NA	NA	122003938	121997062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_121999445_122002709_122002984_122003914
ES.27061.3	chr5	-	5087	22	NIC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	31	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	3.77844465235759	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCTGTTTTGATATTAG	NA	False	NA	NA	False	AATAAA	-26	NA	122188134	121998270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122187838
ES.27061.4	chr5	-	5495	23	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-363	5	intron_retention	FALSE	canonical	0	0	junction_13	4.05055857794804	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGATGCTGTTTTGATAT	NA	False	NA	NA	False	AATAAA	-23	NA	122188528	121998273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122015223_122017877_122017983_122020277_122020381_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
ES.27061.6	chr5	-	5322	23	NIC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-379	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	3.3016399631518	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCAGCCGATGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	122188544	121998280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122181832_122181908_122188078
ES.27061.7	chr5	-	5348	24	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-337	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	3.95198019327212	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCAGCCGATGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	122188502	121998280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867_122062979_122174763_122174832_122181832_122181908_122188078
ES.27061.8	chr5	-	4661	22	NNC	ENSMUSG00000042589.19	novel	8784	23	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.38974273390153	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCAGCCGATGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	122187943	121998280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007259_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122181832_122181908_122187838
ES.27061.9	chr5	-	3960	13	NNC	ENSMUSG00000042589.19	novel	4697	21	NA	NA	-8499	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	4.57954388801136	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCCCAGCCGATGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	122020886	121998281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122017869_122017983_122020835
ES.27062.1	chr5	+	182	1	Intergenic	novelGene_22545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACTGACACACCTATC	1657	False	NA	NA	False	NA	NA	NA	122208467	122208649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122208500_122208600
ES.27063.1	chr5	+	820	7	FSM	ENSMUSG00000013936.13	ENSMUST00000014080.13	662	7	-158	0	-158	0	multi-exon	FALSE	canonical	3	15	junction_3	1.91485421551268	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGACCATTGGCTCAT	3447	False	NA	NA	False	AATAAA	-21	NA	122238855	122244917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122239093_122239811_122239902_122240758_122240835_122241893_122241999_122242889_122242969_122243050_122243100_122244733
ES.27064.1	chr5	+	135	1	Intergenic	novelGene_22546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	122254613	122254748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122254600_122254700
ES.27065.1	chr5	-	2731	14	NNC	ENSMUSG00000043036.15	novel	2008	12	NA	NA	-480	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.15384615384615	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAGGGCCTTTGATGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	122270546	122246117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122246311_122247234_122247439_122248922_122249116_122251196_122251272_122253400_122253618_122254872_122255094_122258980_122259163_122259564_122259606_122260788_122260971_122262988_122263109_122265469_122265660_122267785_122268019_122268351_122268469_122269983
ES.27065.2	chr5	-	2918	11	NNC	ENSMUSG00000043036.15	novel	1930	12	NA	NA	818	-1	intron_retention	TRUE	canonical	0	0	junction_10	2.19317121994613	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTAGGGCCTTTGATGTG	NA	False	NA	NA	False	AATAAA	-14	NA	122269248	122246118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122247439_122248922_122249116_122251196_122251272_122254872_122255094_122258980_122259163_122260788_122260971_122262988_122263109_122265469_122265660_122267785_122267956_122268351_122268469_122269100
ES.27065.3	chr5	-	6449	10	NNC	ENSMUSG00000043036.15	novel	1930	12	NA	NA	1281	-3	intron_retention	FALSE	canonical	0	0	junction_9	2.10818510677892	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTAGGGCCTTTGATG	NA	False	NA	NA	False	AATAAA	-12	NA	122268785	122246120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122247439_122248922_122249116_122251196_122255094_122258980_122259163_122260788_122260971_122262988_122263109_122265469_122265660_122267785_122267956_122268351_122268469_122268705
ES.27065.4	chr5	-	3127	12	NNC	ENSMUSG00000043036.15	novel	1930	12	NA	NA	805	-3	intron_retention	FALSE	canonical	0	0	junction_11	1.94553950536661	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTAGGGCCTTTGATG	NA	False	NA	NA	False	AATAAA	-12	NA	122269261	122246120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122247439_122248922_122249116_122251196_122251272_122253400_122253599_122254872_122255094_122258980_122259163_122260788_122260971_122262988_122263109_122265469_122265660_122267785_122267956_122268351_122268469_122269100
ES.27065.5	chr5	-	2694	9	NNC	ENSMUSG00000043036.15	novel	2008	12	NA	NA	6534	-3	intron_retention	FALSE	canonical	0	0	junction_8	2.14694550466471	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTAGGGCCTTTGATG	884	False	NA	NA	False	AATAAA	-12	NA	122263532	122246120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122247439_122248922_122249116_122251196_122251272_122253400_122253618_122254872_122255094_122258980_122259163_122260788_122260971_122262988_122263109_122263346
ES.27066.1	chr5	-	189	1	Genic_Genomic	ENSMUSG00000043036.15	novel	NA	NA	NA	NA	260	70	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAACCCCTCCTTTA	NA	False	NA	2	True	NA	NA	NA	122272618	122272429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_122272400_122272600
ES.27067.1	chr5	-	174	1	Intergenic	novelGene_22547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATTCTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	122286084	122285910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122285900_122286100
ES.27068.1	chr5	-	168	1	Intergenic	novelGene_22548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTCACCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	122291200	122291032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122291000_122291200
ES.27069.1	chr5	+	2989	8	NNC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	-1545	0	intron_retention	FALSE	canonical	1	2	junction_1	1013.53747048722	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTTTCTGTCAGCA	NA	False	NA	3	True	ATTAAA	-19	NA	122294795	122313336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122295013_122295952_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.10	chr5	+	4707	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	4	63	intron_retention	FALSE	canonical	3	2504	junction_1	183.74846938138	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTGTGATTCCTTC	NA	False	NA	NA	False	ATTAAA	-11	NA	122296344	122312801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122309990_122310794_122311344_122312117
ES.27069.12	chr5	+	3355	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	18	2	intron_retention	FALSE	canonical	3	2504	junction_1	214.607053705138	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296358	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122311344_122312117
ES.27069.13	chr5	+	5837	5	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	18	2	intron_retention	FALSE	canonical	3	2504	junction_1	175.375311831512	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296358	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122311019_122311208_122311344_122312117
ES.27069.14	chr5	+	2355	7	NNC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_3	1060.25773858163	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGTTCGTGTCTTTC	NA	False	NA	-5	True	ATTAAA	-11	NA	122296358	122313328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122306237_122306370_122306981_122307217_122309891_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.16	chr5	+	6029	4	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	20	2	intron_retention	FALSE	canonical	3	2504	junction_1	202.501577497285	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTCTTTCTGTCAG	NA	False	NA	1	True	ATTAAA	-17	NA	122296360	122313334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122311344_122312117
ES.27069.17	chr5	+	1674	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	22	688	22	-90	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGACTGCTTTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	122296362	122312648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.18	chr5	+	5497	4	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	23	67	intron_retention	FALSE	canonical	3	2504	junction_1	202.501577497285	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGATTCCTTCCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	122296363	122312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122311344_122312117
ES.27069.19	chr5	+	2246	6	ISM	ENSMUSG00000004455.17	ENSMUST00000197730.2	923	7	-288	-171	27	2	intron_retention	FALSE	canonical	3	39	junction_3	1111.91988920066	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296367	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311019_122311208_122311344_122312117
ES.27069.2	chr5	+	1863	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	-422	1	-344	-1	multi-exon	FALSE	canonical	3	517	junction_7	836.265410461711	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTCTTTCTGTCAGC	NA	False	NA	2	True	ATTAAA	-18	NA	122295996	122313335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
ES.27069.20	chr5	+	1771	6	NNC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	27	2	intron_retention	TRUE	non_canonical	0	0	junction_1	1175.83355965034	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296367	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296407_122307157_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.21	chr5	+	5674	5	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	27	0	intron_retention	FALSE	canonical	3	215	junction_3	1128.85749764973	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGTTCGTGTCTTTC	NA	False	NA	-5	True	ATTAAA	-11	NA	122296367	122313328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122310867_122311208_122311344_122312117
ES.27069.22	chr5	+	1479	8	NNC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1188.11818281118	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296369	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122306237_122306374_122306991_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
ES.27069.24	chr5	+	2808	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	-38	67	intron_retention	FALSE	canonical	3	2504	junction_1	214.607053705138	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGATTCCTTCCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	122296380	122312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122311344_122312117
ES.27069.25	chr5	+	2179	7	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	215	junction_5	1006.08571812854	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTCTTTCTGTCAGC	NA	False	NA	2	True	ATTAAA	-18	NA	122296392	122313335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122310867_122311208_122311344_122312117
ES.27069.3	chr5	+	2616	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-126	2	-48	2	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296292	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
ES.27069.30	chr5	+	5267	5	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-15	67	intron_retention	FALSE	canonical	3	2504	junction_1	175.375311831512	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGATTCCTTCCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	122296403	122312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122311019_122311208_122311344_122312117
ES.27069.31	chr5	+	4086	4	ISM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-15	0	-15	0	intron_retention	FALSE	canonical	3	2504	junction_1	242.537053297475	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296403	122313332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884
ES.27069.32	chr5	+	2400	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	-15	2	intron_retention	FALSE	canonical	3	39	junction_3	1204.20066849342	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296403	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311344_122312117
ES.27069.33	chr5	+	1638	7	FSM	ENSMUSG00000004455.17	ENSMUST00000132555.8	1632	7	-12	6	-12	2	multi-exon	FALSE	canonical	3	517	junction_6	895.497518453042	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296406	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117_122312179_122313042
ES.27069.34	chr5	+	1966	6	NNC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	-11	65	intron_retention	FALSE	canonical	0	0	junction_4	1160.68214425828	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTGATTCCTTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	122296407	122312803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309994_122310806_122311344_122312117
ES.27069.35	chr5	+	1295	8	NIC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	215	junction_5	1147.01337109442	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296407	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122310867_122311208_122311344_122312117_122312179_122313042
ES.27069.36	chr5	+	4831	6	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-11	2	intron_retention	FALSE	canonical	3	215	junction_4	1055.67165349838	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296407	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122309990_122310794_122310867_122311208_122311344_122312117
ES.27069.37	chr5	+	2376	8	NNC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	-11	2	intron_retention	FALSE	canonical	0	0	junction_1	1326.08356925688	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296407	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122302539_122302605_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.38	chr5	+	1632	7	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-11	65	combination_of_known_junctions	FALSE	canonical	3	215	junction_5	1006.08571812854	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTGATTCCTTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	122296407	122312803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122310867_122311208_122311344_122312117
ES.27069.4	chr5	+	1771	6	ISM	ENSMUSG00000004455.17	ENSMUST00000197730.2	923	7	-336	352	-21	69	5prime_fragment	FALSE	canonical	3	39	junction_3	1111.91988920066	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATTCCTTCCTAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	122296319	122312807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311019_122311208_122311344_122312117
ES.27069.40	chr5	+	5111	5	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-11	67	intron_retention	FALSE	canonical	3	215	junction_3	1128.85749764973	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGATTCCTTCCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	122296407	122312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122310867_122311208_122311344_122312117
ES.27069.41	chr5	+	1776	7	NNC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-9	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1060.25773858163	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTCTGTGATTCCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	122296409	122312800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122306237_122306370_122306981_122307217_122309891_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.42	chr5	+	3114	6	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	-9	2	intron_retention	FALSE	canonical	3	2504	junction_1	193.910288535704	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296409	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122311019_122311208_122311344_122312117
ES.27069.43	chr5	+	3381	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-9	-880	-9	876	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCAAACCACAGAGGG	NA	False	NA	NA	False	NA	NA	NA	122296409	122314212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
ES.27069.44	chr5	+	5609	5	ISM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	5915	527	-4665	67	3prime_fragment	FALSE	canonical	3	2917	junction_3	64.5174395028197	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGATTCCTTCCTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	122302333	122312805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
ES.27069.45	chr5	+	6894	3	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	-1946	0	intron_retention	FALSE	canonical	3	2929	junction_1	4.5	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122305052	122313332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122306370_122306981_122311344_122312117
ES.27069.46	chr5	+	6021	1	NIC	ENSMUSG00000004455.17	novel	2384	7	NA	NA	313	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122307311	122313332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122307300_122313300
ES.27069.47	chr5	+	5370	1	Genic_Genomic	ENSMUSG00000004455.17	novel	NA	NA	NA	NA	-869	876	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCAAACCACAGAGGG	NA	False	NA	NA	False	NA	NA	NA	122308842	122314212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_122308800_122314200
ES.27069.48	chr5	+	2980	2	ISM	ENSMUSG00000004455.17	ENSMUST00000132555.8	1632	7	14000	-836	-376	836	intron_retention	FALSE	canonical	3	2938	junction_1	0	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACCAAAAA	1256	False	NA	NA	False	NA	NA	NA	122310418	122314172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122311344_122312117
ES.27069.5	chr5	+	2059	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	-90	523	-12	71	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTCCTTCCTAAAGCC	NA	False	NA	NA	False	ATTAAA	-19	NA	122296328	122312809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
ES.27069.6	chr5	+	1869	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	-11	526	-11	72	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTCCTTCCTAAAGCCA	NA	False	NA	NA	False	ATTAAA	-20	NA	122296329	122312810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.27069.7	chr5	+	1417	7	FSM	ENSMUSG00000004455.17	ENSMUST00000197730.2	923	7	-323	-171	-8	2	multi-exon	FALSE	canonical	3	39	junction_3	1201.21420053026	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296332	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311019_122311208_122311344_122312117_122312179_122313042
ES.27069.8	chr5	+	5236	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	4	2	intron_retention	FALSE	canonical	3	2504	junction_1	183.74846938138	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296344	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122296679_122306237_122306370_122306981_122309990_122310794_122311344_122312117
ES.27069.9	chr5	+	2588	8	NNC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_1	1326.08356925688	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	False	NA	-3	True	ATTAAA	-13	NA	122296344	122313330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122296679_122296897_122297112_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ES.2707.1	chr10	-	158	1	Intergenic	novelGene_2066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	43345789	43345631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43345600_43345800
ES.27070.1	chr5	+	183	1	Intergenic	novelGene_22549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAAACC	6897	False	NA	NA	False	NA	NA	NA	122316059	122316242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122316100_122316200
ES.27071.1	chr5	+	3111	9	NNC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-52	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4724899092654	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122344814	122380336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122345220_122346562_122346696_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.2	chr5	+	2980	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	-31	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATCGGCTCCTTTTTGT	NA	False	NA	27	True	AATAAA	-38	NA	122344835	122380359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.3	chr5	+	2639	8	NIC	ENSMUSG00000064267.14	novel	2805	7	NA	NA	23	-288	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	18.6153327191565	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTACAAGTTAAAGAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	122344889	122380072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.4	chr5	+	3318	7	FSM	ENSMUSG00000064267.14	ENSMUST00000100747.3	2805	7	-529	16	-124	-16	multi-exon	FALSE	canonical	3	76	junction_1	6.12825877028341	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGCTTTCTGTATTCA	NA	False	NA	12	True	AATAAA	-23	NA	122347667	122380344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.5	chr5	+	2822	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	-56	24	-56	-24	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCATGGGGCTTTC	NA	False	NA	4	True	AATAAA	-15	NA	122347735	122380336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.6	chr5	+	1615	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	-21	1196	-21	-1196	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCAGCTCTTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	122347770	122379164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.7	chr5	+	3101	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	160	-471	-20	471	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGACTATCTGCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	122347951	122380831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.8	chr5	+	3183	4	ISM	ENSMUSG00000064267.14	ENSMUST00000100747.3	2805	7	26474	31	26474	-31	3prime_fragment	FALSE	canonical	3	83	junction_1	3.68178700572909	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCCTTGCTGTCATGG	2055	False	NA	-3	True	AATAAA	-8	NA	122374670	122380329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122375849_122376468_122376701_122378276_122378390_122378669
ES.27071.9	chr5	+	3586	1	Genic_Genomic	ENSMUSG00000064267.14	novel	NA	NA	NA	NA	31347	2769	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTGCCTATGGGCC	6928	False	NA	NA	False	NA	NA	NA	122379543	122383129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_122379500_122383100
ES.27072.1	chr5	+	2341	1	Antisense	novelGene_ENSMUSG00000038593.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGATCTAAACAGCA	NA	False	NA	NA	False	NA	NA	NA	122385728	122388069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122385700_122388100
ES.27073.1	chr5	+	175	1	Intergenic	novelGene_22551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	122389891	122390066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122389900_122390100
ES.27074.1	chr5	-	173	1	Intergenic	novelGene_22550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAAAGTTATAGC	4561	False	NA	NA	False	NA	NA	NA	122349638	122349465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122349500_122349600
ES.27075.1	chr5	-	180	1	ISM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	26433	0	13651	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATGGCCT	NA	False	NA	NA	False	NA	NA	NA	122376090	122375910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122375900_122376100
ES.27076.1	chr5	-	4016	13	NIC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-12	-1647	intron_retention	FALSE	non_canonical	0	0	junction_4	11.1952370824978	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTAAGTTCATTTGA	NA	False	NA	-1	True	AATAAA	-16	NA	122402490	122377557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.10	chr5	-	1234	7	NNC	ENSMUSG00000038593.19	novel	2201	13	NA	NA	17	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1159939369957	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATACATCAAAATGTTT	NA	False	NA	NA	False	CATAAA	-14	NA	122402461	122386708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.11	chr5	-	2485	6	NIC	ENSMUSG00000038593.19	novel	2201	13	NA	NA	-12	-1591	intron_retention	FALSE	canonical	3	22	junction_3	2.57681974534502	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTGTTTAGATCCAG	NA	False	NA	NA	False	NA	NA	NA	122402490	122388093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.12	chr5	-	158	1	Intergenic	novelGene_22552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122400973	122400815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122400800_122401000
ES.27076.2	chr5	-	4032	13	NNC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-11	-1651	intron_retention	FALSE	non_canonical	0	0	junction_4	11.1952370824978	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTTGGTAAGTTCAT	NA	False	NA	-5	True	AATAAA	-12	NA	122402489	122377561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.3	chr5	-	2301	13	NNC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-13	55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.1952370824978	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGCTGGCTGTATAAC	NA	False	NA	NA	False	NA	NA	NA	122402491	122379294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.5	chr5	-	2006	13	NNC	ENSMUSG00000038593.19	novel	5717	14	NA	NA	-12	-235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.1952370824978	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTGGGCTGTGGTGT	NA	False	NA	-1	True	TTTAAA	-16	NA	122402490	122379584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387064_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27076.9	chr5	-	3271	12	NNC	ENSMUSG00000038593.19	novel	2790	4	NA	NA	9	-1496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.3574528630847	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGTCTGACTTGTGGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	122402469	122380845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122382562_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122389653_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ES.27077.1	chr5	-	177	1	Intergenic	novelGene_22553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACTGAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	122404291	122404114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122404100_122404300
ES.27078.1	chr5	-	176	1	Intergenic	novelGene_22554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATACAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	122412496	122412320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122412300_122412500
ES.27079.1	chr5	+	4468	8	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	-8931	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.6835563559269	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCACTCCTTTGGTTTGA	7402	False	NA	25	True	AATAAA	-38	NA	122413496	122462345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122413613_122414564_122414656_122417760_122417922_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.10	chr5	+	4300	6	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	17	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.4031055151846	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAAAACAACATAATATGA	-23	True	NA	NA	False	NA	NA	NA	122422444	122462013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122422973_122446193_122446378_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.12	chr5	+	5260	5	ISM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	18	338	18	-338	intron_retention	FALSE	canonical	3	149	junction_2	10.1827059272082	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACATAAAACAACAT	-22	True	NA	NA	False	TTTAAA	-43	NA	122422445	122462006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776
ES.27079.13	chr5	+	4564	1	NIC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	21	-33391	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGGTTTTGAGTTTTT	-19	True	NA	NA	False	AATAAA	-17	NA	122422448	122427012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122422400_122427000
ES.27079.14	chr5	+	5572	5	ISM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	28	16	28	-16	intron_retention	FALSE	canonical	3	149	junction_2	10.1827059272082	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTATTTATACTATTTG	-12	True	NA	8	True	AATAAA	-21	NA	122422455	122462328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776
ES.27079.15	chr5	+	4510	7	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3202232707269	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCACTCCTTTGGTT	-11	True	NA	22	True	AATAAA	-35	NA	122422456	122462342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122422663_122422765_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.16	chr5	+	4344	7	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	30	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.0527592208752	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAACAACATAATATG	-10	True	NA	NA	False	NA	NA	NA	122422457	122462012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122422973_122424086_122424149_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.17	chr5	+	7863	3	NIC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	32	-1	intron_retention	FALSE	canonical	2	10	junction_2	72.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCACTCCTTTGGTTT	-8	True	NA	23	True	AATAAA	-36	NA	122422459	122462343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122422973_122446193_122446374_122455173
ES.27079.18	chr5	+	2492	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	239	1913	239	28	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGAGAATGAGTTACT	158	False	NA	NA	False	NA	NA	NA	122422666	122460431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.19	chr5	+	3853	6	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	417	-337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.3599217730922	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACATAAAACAACATA	336	False	NA	NA	False	TTTAAA	-44	NA	122422844	122462007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122422973_122446193_122446374_122451657_122451857_122455210_122455298_122457776_122457907_122458878
ES.27079.2	chr5	+	173	1	Intergenic	novelGene_22555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	122421004	122421177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122421000_122421200
ES.27079.20	chr5	+	3763	5	ISM	ENSMUSG00000038582.16	ENSMUST00000119015.2	2233	6	12358	-1604	12358	-337	3prime_fragment	FALSE	canonical	3	149	junction_1	10.0840220150494	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACATAAAACAACATA	NA	False	NA	NA	False	TTTAAA	-44	NA	122446192	122462007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.21	chr5	+	7937	2	NIC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	19264	-337	intron_retention	FALSE	canonical	3	157	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACATAAAACAACATA	NA	False	NA	NA	False	TTTAAA	-44	NA	122453098	122462007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122457907_122458878
ES.27079.22	chr5	+	5047	1	NIC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	23098	-365	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-16	NA	122456932	122461979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122456900_122462000
ES.27079.3	chr5	+	3861	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	-58	841	-58	-841	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCAGAACCTTATTTCT	NA	False	NA	NA	False	TTTAAA	-16	NA	122422369	122461503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.4	chr5	+	4687	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	-41	-2	-41	2	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTCCTTTGGTTTGAA	NA	False	NA	26	True	AATAAA	-39	NA	122422386	122462346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.5	chr5	+	4437	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	-14	221	-14	-221	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTTAGTAGGTAGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	122422413	122462123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.7	chr5	+	2386	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	12	2246	12	-305	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGGTCCGTTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	122422439	122460098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.8	chr5	+	4215	6	NNC	ENSMUSG00000038582.16	novel	4644	6	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9393462587787	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCACTCCTTTGGTTT	-24	True	NA	23	True	AATAAA	-36	NA	122422443	122462343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122422561_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.27079.9	chr5	+	5847	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	17	-1220	17	1220	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAAGTTAACTGTT	-23	True	NA	NA	False	AATAAA	-26	NA	122422444	122463564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ES.2708.1	chr10	+	3869	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	-213	2681	-213	2624	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGTAAGATTACTTCA	NA	False	NA	NA	False	CATAAA	-14	NA	43354613	43388711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.10	chr10	+	5764	2	ISM	ENSMUSG00000038214.16	ENSMUST00000214116.2	746	4	979	-5366	979	15	3prime_fragment	FALSE	canonical	3	36	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCTTTAACGCTTCA	NA	False	NA	NA	False	TATAAA	-18	NA	43370139	43391407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_43370339_43385842
ES.2708.2	chr10	+	3401	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	-177	3113	-177	2192	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGACTTTGTTCTGTG	NA	False	NA	NA	False	AAGAAA	-25	NA	43354649	43388279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.3	chr10	+	6383	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	-26	-20	-26	20	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTAACGCTTCATTTCT	NA	False	NA	NA	False	TATAAA	-23	NA	43354800	43391412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.4	chr10	+	4580	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	90	1667	90	-1667	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTCCTCTGTCATTC	NA	False	NA	NA	False	TATAAA	-1	NA	43354916	43389725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.5	chr10	+	5865	2	NIC	ENSMUSG00000038214.16	novel	6337	4	NA	NA	-62	20	intron_retention	FALSE	canonical	1	1	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTAACGCTTCATTTCT	NA	False	NA	NA	False	TATAAA	-23	NA	43355073	43391412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43355369_43385842
ES.2708.6	chr10	+	6070	5	NNC	ENSMUSG00000038214.16	novel	5882	5	NA	NA	50	15	intron_retention	FALSE	canonical	1	1	junction_1	18.0346887968714	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCTTTAACGCTTCA	NA	False	NA	NA	False	TATAAA	-18	NA	43355185	43391407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43355369_43368634_43368712_43369637_43369686_43370141_43370339_43385842
ES.2708.7	chr10	+	5038	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	403	896	94	-896	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAATGGTTTTCATGAA	NA	False	NA	NA	False	TATAAA	-23	NA	43355229	43390496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.8	chr10	+	4124	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	404	1809	95	-1809	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTTTGCTACATTAA	NA	False	NA	NA	False	CATAAA	-40	NA	43355230	43389583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ES.2708.9	chr10	+	5239	4	NNC	ENSMUSG00000038214.16	novel	6337	4	NA	NA	-3130	-680	intron_retention	FALSE	canonical	0	0	junction_1	17.7200451466693	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTGTTCGAATCC	NA	False	NA	NA	False	NA	NA	NA	43366030	43390712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43366155_43369637_43369686_43370141_43370339_43385842
ES.27080.1	chr5	+	4980	2	Antisense	novelGene_ENSMUSG00000038569.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122465466	122472797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122467715_122470065
ES.27080.2	chr5	+	4598	1	Antisense	novelGene_ENSMUSG00000038569.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122465466	122470064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122465500_122470100
ES.27081.1	chr5	-	313	1	Intergenic	novelGene_22556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGGGCGTGCCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	122437529	122437216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122437200_122437500
ES.27081.2	chr5	-	179	1	Intergenic	novelGene_22557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	122437531	122437352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122437400_122437500
ES.27082.1	chr5	-	176	1	Intergenic	novelGene_22558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGAGAGGGGGG	9880	False	NA	NA	False	NA	NA	NA	122449750	122449574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122449600_122449800
ES.27083.1	chr5	-	3491	12	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	5	-3	intron_retention	FALSE	canonical	3	7	junction_10	5.41653422173318	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGAGTGCTTACATTG	9998	False	NA	NA	False	ATTAAA	-44	NA	122492290	122461288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
ES.27083.10	chr5	-	2588	9	NNC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	18	-779	intron_retention	FALSE	canonical	0	0	junction_3	8.45207075218848	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAGAAATAGAATCCAAA	9953	False	NA	NA	False	GATAAA	-11	NA	122492265	122462064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122463528_122463943_122464043_122469531_122469761_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490868_122492201
ES.27083.11	chr5	-	1709	1	FSM	ENSMUSG00000038569.14	ENSMUST00000200653.2	1726	1	2	15	2	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAAAAAAAAGCCAG	9991	False	NA	NA	False	NA	NA	NA	122492281	122490572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122490600_122492300
ES.27083.2	chr5	-	3291	12	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	36	-160	intron_retention	FALSE	canonical	3	7	junction_10	5.41653422173318	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGATTTTTTTATAATAC	9971	False	NA	NA	False	AATAAA	-23	NA	122492247	122461445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
ES.27083.3	chr5	-	4672	10	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	24	-165	intron_retention	FALSE	canonical	0	0	junction_9	6.92820323027551	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGTGATTTTTTTAT	9959	False	NA	NA	False	AATAAA	-18	NA	122492259	122461450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122490606
ES.27083.4	chr5	-	2094	13	NNC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	43	-167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.56167322834318	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATAGTGATTTTTTT	9978	False	NA	NA	False	AATAAA	-16	NA	122492240	122461452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122462231_122463413_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
ES.27083.5	chr5	-	4602	12	NNC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	24	-167	intron_retention	FALSE	canonical	0	0	junction_1	6.64445335077149	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATAGTGATTTTTTT	9959	False	NA	NA	False	AATAAA	-16	NA	122492259	122461452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122462288_122462505_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606
ES.27083.6	chr5	-	4826	11	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	18	-167	intron_retention	FALSE	canonical	3	7	junction_10	5.24976189936268	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATAGTGATTTTTTT	9953	False	NA	NA	False	AATAAA	-16	NA	122492265	122461452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606
ES.27083.7	chr5	-	4243	11	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	24	-744	intron_retention	FALSE	canonical	3	7	junction_10	5.24976189936268	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTGTTTTATGTTTT	9959	False	NA	NA	False	AATAGA	-23	NA	122492259	122462029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606
ES.27083.8	chr5	-	2725	12	NIC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	16	-746	intron_retention	FALSE	canonical	3	7	junction_10	5.41653422173318	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGTTGTTTTATGTT	9951	False	NA	NA	False	GATAAA	-44	NA	122492267	122462031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
ES.27083.9	chr5	-	4584	13	NNC	ENSMUSG00000038569.14	novel	2371	13	NA	NA	35	-759	intron_retention	FALSE	canonical	0	0	junction_1	7.79779171019306	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGTTTCATATTAT	9970	False	NA	NA	False	GATAAA	-31	NA	122492248	122462044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122462288_122462703_122463273_122463413_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122476870_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606
ES.27084.1	chr5	+	1015	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	6	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTGTTTAATTTAA	701	False	NA	28	True	AATAAA	-28	NA	122492453	122501360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492540_122498067_122498268_122500098_122500335_122500867
ES.27084.10	chr5	+	616	4	FSM	ENSMUSG00000029462.19	ENSMUST00000111729.10	874	4	-12	270	1	-270	multi-exon	FALSE	canonical	3	32	junction_1	1030.830194013	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTTGTCCTCATTTC	720	False	NA	-42	True	TATAAA	-29	NA	122492472	122501004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498091_122498268_122500098_122500335_122500867
ES.27084.12	chr5	+	961	4	FSM	ENSMUSG00000029462.19	ENSMUST00000111729.10	874	4	-12	-75	1	0	multi-exon	FALSE	canonical	3	32	junction_1	1030.830194013	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	720	False	NA	17	True	AATAAA	-17	NA	122492472	122501349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498091_122498268_122500098_122500335_122500867
ES.27084.15	chr5	+	686	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	9	-215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTGTATCACTTTTA	741	False	NA	13	True	ATTAAA	-13	NA	122492493	122501059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492540_122498055_122498268_122500098_122500335_122500867
ES.27084.16	chr5	+	8549	1	FSM	ENSMUSG00000029462.19	ENSMUST00000199086.2	3364	1	-3179	-2006	8	-215	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTGTATCACTTTTA	758	False	NA	13	True	ATTAAA	-13	NA	122492510	122501059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492500_122501100
ES.27084.17	chr5	+	959	4	NNC	ENSMUSG00000029462.19	novel	1014	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	758	False	NA	17	True	AATAAA	-17	NA	122492510	122501349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492540_122498055_122498268_122500098_122500335_122500867
ES.27084.18	chr5	+	573	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	85	2058	-6	-285	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGTCTCCACCACTTA	764	False	NA	-57	True	TATAAA	-14	NA	122492516	122500989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ES.27084.19	chr5	+	5140	3	ISM	ENSMUSG00000029462.19	ENSMUST00000111729.10	874	4	1121	165	1083	-165	3prime_fragment	FALSE	canonical	3	2105	junction_2	106	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCATAGTTGCTCTAAA	1853	False	NA	63	True	AAAAAG	-11	NA	122493605	122501109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122498268_122500098_122500335_122500867
ES.27084.2	chr5	+	2692	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	23	1	7	-1	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	702	False	NA	10	True	AATAAA	-23	NA	122492454	122503046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ES.27084.20	chr5	+	6969	2	NIC	ENSMUSG00000029462.19	novel	1014	5	NA	NA	1325	0	intron_retention	FALSE	canonical	3	2105	junction_1	0	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	2095	False	NA	17	True	AATAAA	-17	NA	122493847	122501349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122500335_122500867
ES.27084.3	chr5	+	1004	4	NNC	ENSMUSG00000029462.19	novel	1014	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	703	False	NA	17	True	AATAAA	-17	NA	122492455	122501349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492548_122498073_122498268_122500098_122500335_122500867
ES.27084.4	chr5	+	1003	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	24	1689	8	9	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACCTGTGTTTAATTT	703	False	NA	26	True	AATAAA	-26	NA	122492455	122501358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ES.27084.5	chr5	+	752	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	27	1937	-10	-164	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATAGTTGCTCTAAAG	706	False	NA	64	True	AAAAAG	-12	NA	122492458	122501110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ES.27084.6	chr5	+	703	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	-2	-213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1045.8626423516	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGTATCACTTTTATA	714	False	NA	15	True	ATTAAA	-15	NA	122492466	122501061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492540_122498067_122498268_122500098_122500335_122500867
ES.27084.7	chr5	+	453	3	FSM	ENSMUSG00000029462.19	ENSMUST00000118765.8	713	3	-15	275	1	-216	multi-exon	FALSE	canonical	3	21	junction_2	716	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGTTGTATCACTTTT	717	False	NA	12	True	ATTAAA	-12	NA	122492469	122501058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122492540_122498075_122498268_122500867
ES.27084.9	chr5	+	676	4	NNC	ENSMUSG00000029462.19	novel	2716	4	NA	NA	1	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1045.8626423516	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTGTATCACTTTTA	720	False	NA	13	True	ATTAAA	-13	NA	122492472	122501059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122492529_122498075_122498268_122500098_122500335_122500867
ES.27085.1	chr5	+	2095	8	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	173.444927447138	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGAAGAAAACTGTGTT	7469	False	NA	NA	False	AATAAA	-29	NA	122509943	122520952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519514_122519558_122520110_122520240_122520323
ES.27085.10	chr5	+	3268	5	NIC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	480	junction_4	13.3486890742125	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8092	False	NA	NA	False	AATAAA	-42	NA	122510566	122520965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122520240_122520323
ES.27085.11	chr5	+	1613	7	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	57	6	-19	-6	intron_retention	FALSE	canonical	3	424	junction_4	38.3608596821755	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTTTGAGGTT	8096	False	NA	NA	False	AATAAA	-36	NA	122510570	122520959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ES.27085.12	chr5	+	1408	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	73	111	-3	-50	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTTATTTTCACAAAT	8112	False	NA	NA	False	AATAAA	-17	NA	122510586	122520854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ES.27085.13	chr5	+	1683	7	NIC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	187.328959023662	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8112	False	NA	NA	False	AATAAA	-42	NA	122510586	122520965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518241_122519252_122519558_122520110_122520240_122520323
ES.27085.14	chr5	+	3307	4	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	88	10	12	-10	intron_retention	FALSE	canonical	3	504	junction_3	4.18993502999218	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8127	False	NA	NA	False	AATAAA	-32	NA	122510601	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043
ES.27085.16	chr5	+	2904	6	NIC	ENSMUSG00000029464.11	novel	2198	7	NA	NA	40	-10	intron_retention	FALSE	canonical	3	424	junction_3	33.1203864711751	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8155	False	NA	NA	False	AATAAA	-32	NA	122510629	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122510720_122511973_122512083_122516529_122518169_122519252_122519558_122520110_122520240_122520323
ES.27085.17	chr5	+	2639	6	NIC	ENSMUSG00000029464.11	novel	2198	7	NA	NA	43	-10	intron_retention	FALSE	canonical	3	480	junction_5	11.9733036376766	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8158	False	NA	NA	False	AATAAA	-32	NA	122510632	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122519558_122520110_122520240_122520323
ES.27085.18	chr5	+	1554	7	FSM	ENSMUSG00000029464.11	ENSMUST00000127608.8	2198	7	695	-51	44	-10	multi-exon	FALSE	canonical	3	424	junction_4	30.9861079984061	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8159	False	NA	NA	False	AATAAA	-32	NA	122510633	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519558_122520110_122520240_122520323
ES.27085.19	chr5	+	2201	5	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	120	0	44	0	intron_retention	FALSE	canonical	3	424	junction_4	37.2718056981413	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8159	False	NA	NA	False	AATAAA	-42	NA	122510633	122520965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252
ES.27085.2	chr5	+	2235	6	NIC	ENSMUSG00000029464.11	novel	2198	7	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	424	junction_4	33.4998507459362	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8031	False	NA	NA	False	AATAAA	-32	NA	122510505	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122520240_122520323
ES.27085.21	chr5	+	3172	4	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	122	111	46	-50	intron_retention	FALSE	canonical	3	504	junction_3	4.18993502999218	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGTTATTTTCACAAAT	8161	False	NA	NA	False	AATAAA	-17	NA	122510635	122520854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043
ES.27085.22	chr5	+	4617	3	FSM	ENSMUSG00000029464.11	ENSMUST00000156978.3	500	3	48	-4165	48	-10	multi-exon	FALSE	canonical	3	511	junction_2	1.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8163	False	NA	NA	False	AATAAA	-32	NA	122510637	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122510720_122511973_122512083_122516529
ES.27085.23	chr5	+	1331	8	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	92	-52	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	167.23526139263	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTTATTTTCACAA	8207	False	NA	NA	False	AATAAA	-15	NA	122510681	122520852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510740_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ES.27085.24	chr5	+	1401	8	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	125	-10	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	167.23526139263	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8240	False	NA	NA	False	AATAAA	-32	NA	122510714	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510740_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ES.27085.3	chr5	+	1585	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	4	3	4	-3	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTTTGAGGTTTGT	8043	False	NA	NA	False	AATAAA	-39	NA	122510517	122520962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ES.27085.4	chr5	+	3850	3	NNC	ENSMUSG00000029464.11	novel	500	3	NA	NA	9	-1108	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	257	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATGAAAAAACAAAAAC	8048	False	NA	NA	False	NA	NA	NA	122510522	122515682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512804_122512859
ES.27085.5	chr5	+	1577	8	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	33	-9	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	168.406577989709	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAAAACTGTGTTTGAG	8072	False	NA	NA	False	AATAAA	-33	NA	122510546	122520956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520083_122520240_122520323
ES.27085.6	chr5	+	1495	7	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	46	135	-30	-74	intron_retention	FALSE	canonical	3	424	junction_4	38.3608596821755	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAATTGGAAG	8085	False	NA	NA	False	AAAACA	-13	NA	122510559	122520830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110
ES.27085.7	chr5	+	1434	8	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	-26	-74	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	168.406577989709	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAATTGGAAG	8089	False	NA	NA	False	AAAACA	-13	NA	122510563	122520830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520083_122520240_122520323
ES.27085.8	chr5	+	1651	7	NNC	ENSMUSG00000029464.11	novel	2198	7	NA	NA	-26	-10	intron_retention	FALSE	canonical	3	6	junction_5	181.700990641218	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8089	False	NA	NA	False	AATAAA	-32	NA	122510563	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519558_122520083_122520240_122520323
ES.27085.9	chr5	+	1397	7	NNC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	-24	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	236.542044653564	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAACTGTGTTTGA	8091	False	NA	NA	False	AATAAA	-32	NA	122510565	122520955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122510720_122511973_122512083_122516529_122516698_122519252_122519369_122519468_122519558_122520110_122520240_122520323
ES.27086.1	chr5	+	885	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	13	1	13	-1	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACTGTACCGTGTAT	4501	False	NA	37	True	ATTAAA	-21	NA	122529953	122544241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
ES.27087.11	chr5	-	2417	5	NIC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	223	junction_2	28.6825295258281	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACTGAATTTTAAATT	NA	False	NA	-26	True	ATTAAA	-15	NA	122510432	122502648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122502983_122504376_122505792_122507579_122507702_122508577_122508637_122509945
ES.27087.12	chr5	-	1163	1	Intergenic	novelGene_22559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATTCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	122522549	122521386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122521400_122522500
ES.27087.2	chr5	-	3474	4	NIC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	338	0	intron_retention	FALSE	canonical	3	223	junction_1	33.0689515339624	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTTAAATTATCTTT	NA	False	NA	-20	True	ATTAAA	-21	NA	122510089	122502642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122505792_122507579_122507702_122508577_122508637_122509945
ES.27087.3	chr5	-	1376	7	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.787266829225	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAATTTTAAATTAT	NA	False	NA	-24	True	ATTAAA	-17	NA	122510439	122502646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122502963_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
ES.27087.4	chr5	-	1033	7	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.096288779677	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAATTTTAAATTAT	NA	False	NA	-24	True	ATTAAA	-17	NA	122510383	122502646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122502983_122504376_122504460_122505410_122505583_122505663_122505792_122507579_122507702_122508577_122508637_122510250
ES.27087.5	chr5	-	1498	8	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	120.18879706019	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAATTTTAAATTAT	NA	False	NA	-24	True	ATTAAA	-17	NA	122510439	122502646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122508760_122508863_122509945
ES.27087.6	chr5	-	1389	8	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	-43031	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	96.7156573019433	96	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAATTTTAAATTAT	7382	False	NA	-24	True	ATTAAA	-17	NA	122553458	122502646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945_122510415_122553440
ES.27087.7	chr5	-	2317	6	NIC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	18	-4	intron_retention	FALSE	canonical	3	223	junction_3	25.6780061531265	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAATTTTAAATTAT	NA	False	NA	-24	True	ATTAAA	-17	NA	122510409	122502646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122502983_122504376_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
ES.27087.9	chr5	-	1080	7	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	94.6907246425611	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTGAATTTTAAATTA	NA	False	NA	-25	True	ATTAAA	-16	NA	122510404	122502647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122510225
ES.27088.1	chr5	+	2536	12	NNC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	-746	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.5216849921967	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCTTCCTTTTAT	NA	False	NA	33	True	AATAAA	-29	NA	122559009	122582520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122559058_122560314_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.10	chr5	+	3197	8	NIC	ENSMUSG00000029466.12	novel	3599	10	NA	NA	17	0	intron_retention	TRUE	canonical	0	0	junction_7	101.816962621908	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	122560523	122581497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122579352
ES.27088.11	chr5	+	3711	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	-15	3	intron_retention	FALSE	canonical	3	226	junction_7	30.3498123735734	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTGTGAGCTTCAGCC	NA	False	NA	NA	False	GATAAA	-23	NA	122560528	122582978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122579504_122581866
ES.27088.12	chr5	+	2286	11	NNC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	-13	-464	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	82.2615341456747	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACCCTTTGAGACTCT	NA	False	NA	24	True	AATAAA	-20	NA	122560530	122582511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566170_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.13	chr5	+	1984	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	25	742	-12	736	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGGACGATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	122560531	122582233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.15	chr5	+	1203	7	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-5	5022	-5	-2073	5prime_fragment	FALSE	canonical	3	232	junction_6	26.8416136292553	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGACTTTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	122560538	122576475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191
ES.27088.16	chr5	+	1783	11	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	84.7693340778374	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGCTTTTACCTGTCA	NA	False	NA	NA	False	ATTAAA	-21	NA	122560544	122579864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122579685
ES.27088.17	chr5	+	2197	11	NNC	ENSMUSG00000029466.12	novel	3599	10	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.3320572821258	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	122560570	122581497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122580878
ES.27088.18	chr5	+	3422	7	NIC	ENSMUSG00000029466.12	novel	3599	10	NA	NA	27	-7	intron_retention	FALSE	canonical	0	0	junction_4	105.105370409361	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATACAGCTTTTACC	NA	False	NA	NA	False	ATTAAA	-16	NA	122560570	122579859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122573581_122573725_122576191_122578374_122579352
ES.27088.19	chr5	+	3997	8	NNC	ENSMUSG00000029466.12	novel	3599	10	NA	NA	27	-7	intron_retention	FALSE	canonical	0	0	junction_5	99.3145898400736	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATACAGCTTTTACC	NA	False	NA	NA	False	ATTAAA	-16	NA	122560570	122579859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571613_122573581_122573725_122576191_122577579_122578148
ES.27088.2	chr5	+	2545	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	-255	461	-255	-461	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTGAGACTCTTCC	NA	False	NA	27	True	AATAAA	-23	NA	122560251	122582514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.20	chr5	+	2173	11	NNC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	92	-464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.4941518467784	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACCCTTTGAGACTCT	NA	False	NA	24	True	AATAAA	-20	NA	122560635	122582511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579337_122579504_122581866
ES.27088.21	chr5	+	3985	4	NNC	ENSMUSG00000029466.12	novel	686	2	NA	NA	4191	-340	intron_retention	TRUE	non_canonical	0	0	junction_1	118.676965845198	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACCAGCCTGGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	122564734	122582635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122566035_122576608_122578374_122579352_122579504_122581866
ES.27088.22	chr5	+	174	1	Intergenic	novelGene_22560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGCAAACT	NA	False	NA	-9	True	NA	NA	NA	122572029	122572203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122572000_122572200
ES.27088.23	chr5	+	1483	6	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	13074	461	-3856	-461	3prime_fragment	FALSE	canonical	3	226	junction_2	11.0706820024784	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTGAGACTCTTCC	NA	False	NA	27	True	AATAAA	-23	NA	122573580	122582514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.25	chr5	+	2444	3	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	16960	1	67	-1	3prime_fragment	FALSE	canonical	3	238	junction_1	3.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGAGTGTTTTGCCTGC	NA	False	NA	NA	False	ATTAAA	-13	NA	122577503	122581496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122577579_122578148_122578374_122579352
ES.27088.26	chr5	+	3131	1	NIC	ENSMUSG00000029466.12	novel	2950	12	NA	NA	165	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	122578366	122581497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122578400_122581500
ES.27088.27	chr5	+	1840	1	NIC	ENSMUSG00000029466.12	novel	2950	12	NA	NA	1235	-463	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCTTTGAGACTCTT	NA	False	NA	25	True	AATAAA	-21	NA	122580672	122582512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122580700_122582500
ES.27088.3	chr5	+	2023	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-52	1628	-15	3	multi-exon	FALSE	canonical	3	226	junction_7	31.1071426040332	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTACCTGTCATCTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	122560491	122579869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
ES.27088.4	chr5	+	4630	7	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-51	1641	-14	-10	intron_retention	FALSE	canonical	3	232	junction_6	26.8416136292553	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTGAATACAGCTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	122560492	122579856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191
ES.27088.5	chr5	+	2985	9	ISM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	-38	1631	-1	0	intron_retention	FALSE	canonical	3	226	junction_7	31.9567578925022	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCTTTTACCTGTCATC	NA	False	NA	NA	False	ATTAAA	-23	NA	122560505	122579866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148
ES.27088.6	chr5	+	1769	7	NNC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	4	-464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	98.6807422392479	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACCCTTTGAGACTCT	NA	False	NA	24	True	AATAAA	-20	NA	122560510	122582511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566193_122566381_122576176_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ES.27088.7	chr5	+	3258	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	9	-463	intron_retention	FALSE	canonical	3	226	junction_7	30.3498123735734	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCTTTGAGACTCTT	NA	False	NA	25	True	AATAAA	-21	NA	122560515	122582512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122579504_122581866
ES.27088.8	chr5	+	2845	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	10	-466	intron_retention	FALSE	canonical	3	226	junction_7	29.643978007325	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACACCCTTTGAGACT	NA	False	NA	22	True	AATAAA	-18	NA	122560516	122582509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122578374_122579352_122579504_122581866
ES.27088.9	chr5	+	1937	11	NNC	ENSMUSG00000029466.12	novel	3599	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	84.7693340778374	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGTGTTTTGCCTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	122560516	122581497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581192
ES.27089.1	chr5	-	3340	1	Antisense	novelGene_ENSMUSG00000029466.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATGAGAATAAAACCCG	NA	False	NA	NA	False	NA	NA	NA	122570476	122567136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_122567100_122570500
ES.2709.1	chr10	+	159	1	Intergenic	novelGene_2067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43399795	43399954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_43399800_43400000
ES.27090.1	chr5	+	177	1	Intergenic	novelGene_22561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATGTATGTATGG	NA	False	NA	NA	False	NA	NA	NA	122610548	122610725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122610500_122610700
ES.27091.1	chr5	-	7352	19	NNC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_18	291.904009251815	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGTGGCTGATTTA	7224	False	NA	NA	False	AATAAA	-23	NA	122640341	122591575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.10	chr5	-	4333	21	NNC	ENSMUSG00000029467.16	novel	3984	21	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	366.113793785484	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGAGCTGTGGCTGAT	7265	False	NA	NA	False	AATAAA	-20	NA	122640300	122591578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611263_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.101	chr5	-	4537	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-80	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	389.33265553594	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7197	False	NA	-21	True	AATAAA	-20	NA	122640368	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607925_122611268_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.102	chr5	-	4069	18	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	22	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	459.117469947586	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7350	False	NA	-21	True	AATAAA	-20	NA	122640215	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.105	chr5	-	4466	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	283.937997991817	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7295	False	NA	-21	True	AATAAA	-20	NA	122640270	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609239_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.106	chr5	-	4436	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	386.709947290386	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7295	False	NA	-21	True	AATAAA	-20	NA	122640270	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596580_122597518_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.107	chr5	-	4380	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	378.8364750024	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	7279	False	NA	-21	True	AATAAA	-20	NA	122640286	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627392_122629805_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.108	chr5	-	1903	11	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	32041	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	388.096186531123	1532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAACTGTCTTGTTCT	6876	False	NA	-21	True	AATAAA	-20	NA	122607639	122594395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122594560_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412
ES.27091.113	chr5	-	4339	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	291.141050199231	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATAACTGTCTTGTT	7295	False	NA	-23	True	AATAAA	-18	NA	122640270	122594397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.118	chr5	-	4460	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	20	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	458.050579448747	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAATAACTGTCTTG	7297	False	NA	-25	True	AATAAA	-16	NA	122640268	122594399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609238_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639619
ES.27091.119	chr5	-	4481	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	284.082622291629	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAATAACTGTCTTG	7279	False	NA	-25	True	AATAAA	-16	NA	122640286	122594399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599931_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.12	chr5	-	4312	20	NNC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	378.47690093708	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCAGAGCTGTGGCT	7282	False	NA	NA	False	AATAAA	-17	NA	122640283	122591581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122592368_122595358_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639611
ES.27091.123	chr5	-	3854	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	58	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	284.055463198368	1551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGAAAAATAACTGTCT	7665	False	NA	-27	True	AATAAA	-14	NA	122639900	122594401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596555_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.124	chr5	-	4378	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-25	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	291.198481375772	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGAAAAATAACTGTCT	7303	False	NA	-27	True	AATAAA	-14	NA	122640262	122594401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638993_122639012_122639630
ES.27091.129	chr5	-	5835	17	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-45	1	intron_retention	FALSE	canonical	3	1036	junction_15	113.620100966994	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGAAAAATAACTGTCT	7232	False	NA	-27	True	AATAAA	-14	NA	122640333	122594401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993
ES.27091.13	chr5	-	7758	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	7	-5	intron_retention	FALSE	canonical	3	1036	junction_16	107.890276338487	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCAGAGCTGTGGCT	7284	False	NA	NA	False	AATAAA	-17	NA	122640281	122591581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.130	chr5	-	4283	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	21	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	283.966596235856	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGAAAAATAACTGTCT	7349	False	NA	-27	True	AATAAA	-14	NA	122640216	122594401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.136	chr5	-	3776	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	276.93845886767	1551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAAAAATAACTGTC	7255	False	NA	-28	True	AATAAA	-13	NA	122640310	122594402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122594634_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.137	chr5	-	4383	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	282.17964455388	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAAAAATAACTGTC	7362	False	NA	-28	True	AATAAA	-13	NA	122640203	122594402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605837_122607408_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.138	chr5	-	5438	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-39	-1	intron_retention	FALSE	canonical	3	1036	junction_16	107.821597621164	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAGAGAAAAATAACTGT	7238	False	NA	-29	True	AATAAA	-12	NA	122640327	122594403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.139	chr5	-	4169	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-44	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	276.93845886767	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAGAGAAAAATAACTGT	7233	False	NA	-29	True	AATAAA	-12	NA	122640332	122594403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630_122639893_122640252
ES.27091.14	chr5	-	4016	22	NNC	ENSMUSG00000029467.16	novel	3984	21	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	360.559001622194	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCAGAGCTGTGGCT	7627	False	NA	NA	False	AATAAA	-17	NA	122639938	122591581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122592368_122594517_122594575_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.147	chr5	-	4424	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	21	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	381.525321555011	1550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATAAAACATTT	7298	False	NA	-54	True	NA	NA	NA	122640267	122594428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598046_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639626
ES.27091.15	chr5	-	6667	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	17	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	282.17964455388	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCAGAGCTGTGGCT	7902	False	NA	NA	False	AATAAA	-17	NA	122639663	122591581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607427_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.150	chr5	-	4427	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	7	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	372.122057240315	1550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATAAAACATTT	7284	False	NA	-54	True	NA	NA	NA	122640281	122594428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598062_122598260_122598703_122599040_122599628_122599848_122599927_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.152	chr5	-	4111	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-45	420	-45	-420	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTGTGTCTTTTGCAT	7232	False	NA	NA	False	ACTAAA	-5	NA	122640333	122594822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.153	chr5	-	4113	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-54	-420	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	291.904009251815	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTGTGTCTTTTGCAT	7223	False	NA	NA	False	ACTAAA	-5	NA	122640342	122594822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639626
ES.27091.154	chr5	-	4052	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	0	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	291.904009251815	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTGTGTCTTTTGCAT	7277	False	NA	NA	False	ACTAAA	-5	NA	122640288	122594822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.157	chr5	-	3934	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-37	589	-37	-589	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGCAGATATTTTT	7240	False	NA	NA	False	ATTAAA	-32	NA	122640325	122594991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.158	chr5	-	3927	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-37	-596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	291.904009251815	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACACTATTTTATGCAGA	7240	False	NA	NA	False	ATTAAA	-25	NA	122640325	122594998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639619
ES.27091.159	chr5	-	3144	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	566	776	-38	-776	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTAATTTTTTATTGTT	7843	False	NA	NA	False	NA	NA	NA	122639722	122595178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.16	chr5	-	7289	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	10	-5	intron_retention	FALSE	non_canonical	0	0	junction_18	291.904009251815	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAGCAGAGCTGTGGCT	7287	False	NA	NA	False	AATAAA	-17	NA	122640278	122591581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638887_122639630
ES.27091.160	chr5	-	2788	14	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-42	-3412	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	318.312767182655	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGATGTTGTCTGATG	7235	False	NA	NA	False	AATAAA	-16	NA	122640330	122597814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122598260_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.161	chr5	-	2467	1	FSM	ENSMUSG00000105434.2	ENSMUST00000197944.2	2200	1	-240	-27	-240	27	mono-exon	FALSE	NA	NA	NA	NA	NA	1314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACAACAACCACAGGAAA	NA	False	NA	NA	False	AAAACA	-31	NA	122623302	122620835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122620800_122623300
ES.27091.162	chr5	-	180	1	FSM	ENSMUSG00000105970.2	ENSMUST00000197656.2	2887	1	1217	1490	1217	-1490	mono-exon	FALSE	NA	NA	NA	NA	NA	1292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAAAAGGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	122631754	122631574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122631600_122631800
ES.27091.163	chr5	-	4564	2	ISM	ENSMUSG00000029467.16	ENSMUST00000196490.2	698	5	-650	8652	-42	-8652	intron_retention	FALSE	canonical	3	1128	junction_1	0	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTAATGTTTTACAC	7235	False	NA	NA	False	NA	NA	NA	122640330	122635649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122638877_122638993
ES.27091.17	chr5	-	6705	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-2	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	388.743925362407	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTCAGCAGAGCTGTGG	7883	False	NA	NA	False	AATAAA	-15	NA	122639682	122591583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599921_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639610
ES.27091.19	chr5	-	7286	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	-8	intron_retention	FALSE	non_canonical	0	0	junction_18	291.904009251815	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTCAGCAGAGCTGTG	7295	False	NA	NA	False	AATAAA	-14	NA	122640270	122591584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639619
ES.27091.20	chr5	-	7981	18	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	7	-8	intron_retention	FALSE	canonical	3	1036	junction_15	110.979626547626	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTCAGCAGAGCTGTG	7284	False	NA	NA	False	AATAAA	-14	NA	122640281	122591584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.22	chr5	-	4288	20	NNC	ENSMUSG00000029467.16	novel	3984	21	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	375.103701266198	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCCTCAGCAGAGCTG	7279	False	NA	NA	False	AATAAA	-12	NA	122640286	122591586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.23	chr5	-	4263	20	NIC	ENSMUSG00000029467.16	novel	3984	21	NA	NA	-64	-10	combination_of_known_splicesites	FALSE	canonical	3	8	junction_17	374.270074468504	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCCTCAGCAGAGCTG	7213	False	NA	NA	False	AATAAA	-12	NA	122640352	122591586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122638793_122638877_122638993_122639012_122639630
ES.27091.24	chr5	-	7244	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-53	-107	intron_retention	FALSE	canonical	0	0	junction_18	291.904009251815	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCATGTTTGACTGTAGTC	7224	False	NA	11	True	AATAAA	-39	NA	122640341	122591683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.25	chr5	-	4246	21	FSM	ENSMUSG00000029467.16	ENSMUST00000177974.8	3984	21	-381	119	-51	-119	multi-exon	FALSE	canonical	3	23	junction_1	272.291071282185	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTCTCACAGCGCATGT	7226	False	NA	-1	True	AATAAA	-27	NA	122640339	122591695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.26	chr5	-	7237	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-45	-2706	-45	-120	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTCTCACAGCGCATG	7232	False	NA	-2	True	AATAAA	-26	NA	122640333	122591696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.28	chr5	-	7375	21	NNC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	-43	-122	intron_retention	FALSE	canonical	0	0	junction_19	369.183910808692	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTTCTCACAGCGCA	7234	False	NA	-4	True	AATAAA	-24	NA	122640331	122591698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639152_122639295_122639630
ES.27091.29	chr5	-	4655	2	ISM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	43850	-2704	43242	-122	intron_retention	FALSE	canonical	3	1139	junction_1	0	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTTCTCACAGCGCA	NA	False	NA	-4	True	AATAAA	-24	NA	122596438	122591698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122595490_122595574
ES.27091.3	chr5	-	4150	4	NIC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	42138	0	intron_retention	FALSE	canonical	1	1	junction_2	558.880627285967	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGTGGCTGATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	122597542	122591575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596510_122596597_122597510
ES.27091.30	chr5	-	6895	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-58	-133	intron_retention	FALSE	canonical	0	0	junction_1	284.100212509464	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTTGCTCACAGCTT	7549	False	NA	-15	True	AATAAA	-13	NA	122640016	122591709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595478_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.31	chr5	-	7017	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-12	-2519	-12	-307	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTGAATGGTTACAAC	7265	False	NA	NA	False	TATAAA	-18	NA	122640300	122591883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.32	chr5	-	7002	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	0	-309	intron_retention	FALSE	non_canonical	0	0	junction_8	388.743925362407	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTGCTGAATGGTTACA	7277	False	NA	NA	False	TATAAA	-16	NA	122640288	122591885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639619
ES.27091.34	chr5	-	4100	21	FSM	ENSMUSG00000029467.16	ENSMUST00000177974.8	3984	21	-467	351	-137	-351	multi-exon	FALSE	canonical	3	23	junction_1	272.291071282185	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTACAGTTTGCTTAT	7140	False	NA	NA	False	NA	NA	NA	122640425	122591927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.35	chr5	-	4746	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	388.743925362407	1555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATTTTTATTTGACT	7295	False	NA	-2	True	AATGAA	-11	NA	122640270	122594109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.36	chr5	-	4811	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-40	-285	-40	285	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTATAGAAATATTTTT	7237	False	NA	-10	True	AATGAA	-3	NA	122640328	122594117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.37	chr5	-	4880	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-123	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	284.100212509464	1555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTGTATAGAAATATTT	7154	False	NA	-12	True	AATGAA	-1	NA	122640411	122594119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595478_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.40	chr5	-	4641	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-139	-16	-139	16	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCTTAATGGCCT	7138	False	NA	-12	True	AATAAA	-29	NA	122640427	122594386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.41	chr5	-	4615	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-128	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	291.904009251815	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTTCTTAATGGCC	7149	False	NA	-13	True	AATAAA	-28	NA	122640416	122594387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.43	chr5	-	4549	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-48	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	291.904009251815	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTTCTTAATGGCC	7229	False	NA	-13	True	AATAAA	-28	NA	122640336	122594387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638884_122639619
ES.27091.45	chr5	-	4539	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-40	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	291.904009251815	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7237	False	NA	-16	True	AATAAA	-25	NA	122640328	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639611
ES.27091.47	chr5	-	4575	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	1	12	intron_retention	FALSE	canonical	3	1036	junction_16	106.662268427841	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7278	False	NA	-16	True	AATAAA	-25	NA	122640287	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.48	chr5	-	4459	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	451.960820573347	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7295	False	NA	-16	True	AATAAA	-25	NA	122640270	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598709_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.49	chr5	-	9496	8	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	31943	12	intron_retention	FALSE	canonical	3	1098	junction_5	93.0551734516811	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	6778	False	NA	-16	True	AATAAA	-25	NA	122607737	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122604994_122605769_122605859_122607412
ES.27091.55	chr5	-	4438	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-45	12	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	289.464064167635	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7232	False	NA	-16	True	AATAAA	-25	NA	122640333	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122638793_122638877_122638993_122639012_122639630
ES.27091.57	chr5	-	4289	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	24	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	291.181861631541	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7301	False	NA	-16	True	AATAAA	-25	NA	122640264	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627399_122638832_122638877_122638993_122639012_122639630
ES.27091.59	chr5	-	4546	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-50	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	291.904009251815	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7227	False	NA	-16	True	AATAAA	-25	NA	122640338	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638893_122639630
ES.27091.6	chr5	-	4462	22	NNC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	360.41807419803	1578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGTGGCTGATTTA	7213	False	NA	NA	False	AATAAA	-23	NA	122640352	122591575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122592368_122593955_122594039_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.61	chr5	-	4486	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	6	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	284.082622291629	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7283	False	NA	-16	True	AATAAA	-25	NA	122640282	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599838_122599921_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.62	chr5	-	3262	13	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	31853	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	354.635846091922	1532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	6688	False	NA	-16	True	AATAAA	-25	NA	122607827	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595677_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412
ES.27091.67	chr5	-	2361	11	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	32101	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	611.1497688783	1532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	6936	False	NA	-16	True	AATAAA	-25	NA	122607579	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596244_122597556_122597714_122598179_122598260_122598854_122599040_122599628_122599798_122604043_122604145_122604890_122604994_122605769_122605859_122607412
ES.27091.69	chr5	-	4360	18	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	469.806497750638	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7295	False	NA	-16	True	AATAAA	-25	NA	122640270	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122638793_122638877_122639626
ES.27091.7	chr5	-	7453	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	-140	-2827	-140	0	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGTGGCTGATTTA	7137	False	NA	NA	False	AATAAA	-23	NA	122640428	122591575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.72	chr5	-	4295	21	NNC	ENSMUSG00000029467.16	novel	5674	21	NA	NA	24	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	276.93845886767	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7352	False	NA	-16	True	AATAAA	-25	NA	122640213	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630_122639785_122639912
ES.27091.73	chr5	-	3975	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	20	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	276.93845886767	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7297	False	NA	-16	True	AATAAA	-25	NA	122640268	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630_122639736_122640238
ES.27091.74	chr5	-	4371	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-45	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	458.018989848378	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7232	False	NA	-16	True	AATAAA	-25	NA	122640333	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611321_122627357_122627426_122629811_122629849_122638793_122638884_122639619
ES.27091.76	chr5	-	4142	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-22	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	387.827460204778	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7255	False	NA	-16	True	AATAAA	-25	NA	122640310	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595620_122596500_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607697_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.77	chr5	-	4011	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	16	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	276.93845886767	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7293	False	NA	-16	True	AATAAA	-25	NA	122640272	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630_122639751_122640221
ES.27091.78	chr5	-	4301	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	18	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	276.93845886767	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7295	False	NA	-16	True	AATAAA	-25	NA	122640270	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595211_122595389_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.8	chr5	-	4328	21	FSM	ENSMUSG00000029467.16	ENSMUST00000177974.8	3984	21	-344	0	-14	0	multi-exon	FALSE	canonical	3	23	junction_1	272.291071282185	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTGTGGCTGATTT	7263	False	NA	NA	False	AATAAA	-22	NA	122640302	122591576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.82	chr5	-	4533	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-43	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	291.904009251815	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7234	False	NA	-16	True	AATAAA	-25	NA	122640331	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638887_122639630
ES.27091.83	chr5	-	6620	16	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-43	12	intron_retention	FALSE	canonical	3	1036	junction_14	112.497624666282	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7234	False	NA	-16	True	AATAAA	-25	NA	122640331	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122595490_122595574_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993
ES.27091.84	chr5	-	4477	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	4	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	456.245169093315	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7281	False	NA	-16	True	AATAAA	-25	NA	122640284	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599926_122600043_122604008_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.89	chr5	-	5083	17	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	34	12	intron_retention	FALSE	canonical	0	0	junction_16	308.988413769432	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7362	False	NA	-16	True	AATAAA	-25	NA	122640203	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122639626
ES.27091.91	chr5	-	4513	20	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-48	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	283.937997991817	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7229	False	NA	-16	True	AATAAA	-25	NA	122640336	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609263_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27091.93	chr5	-	4418	19	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	22	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	388.650657188861	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7350	False	NA	-16	True	AATAAA	-25	NA	122640215	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629750_122629849_122638793_122638884_122639619
ES.27091.95	chr5	-	4220	21	NNC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	-39	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	276.93845886767	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTTCTTAATG	7238	False	NA	-16	True	AATAAA	-25	NA	122640327	122594390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122594509_122594825_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ES.27092.1	chr5	+	4433	2	NNC	ENSMUSG00000105430.2	novel	778	2	NA	NA	-1188	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTGTCTGGTCAAATGA	26	False	NA	NA	False	ATTAAA	-12	NA	122718343	122722914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122719327_122719464
ES.27093.1	chr5	-	3132	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	0	-182	0	182	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAATCTACTCTTAATAT	1243	False	NA	NA	False	AATATA	-25	NA	122752581	122688084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ES.27093.10	chr5	-	2658	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	-3	295	-3	-291	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAGTTGTGTCAAGAT	1240	False	NA	-4	True	AATAAA	-36	NA	122752584	122688561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ES.27093.11	chr5	-	2852	16	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	3	-291	intron_retention	FALSE	canonical	1	1	junction_6	20.2539433746177	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAGTTGTGTCAAGAT	1248	False	NA	-4	True	AATAAA	-36	NA	122752576	122688561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
ES.27093.12	chr5	-	2854	19	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	28	-291	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	14.8668991843634	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAGTTGTGTCAAGAT	1288	False	NA	-4	True	AATAAA	-36	NA	122752536	122688561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752256
ES.27093.15	chr5	-	869	7	FSM	ENSMUSG00000029469.15	ENSMUST00000144065.6	872	7	-22	25	-10	-25	multi-exon	FALSE	canonical	3	48	junction_5	10.4682058316281	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	1233	False	NA	NA	False	NA	NA	NA	122752591	122740269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ES.27093.2	chr5	-	3214	19	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	-3	17	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	14.8668991843634	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTCAGTCTGTGT	1240	False	NA	NA	False	ATTAAA	-37	NA	122752584	122688249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752256
ES.27093.3	chr5	-	2925	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	25	0	8	0	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTTTTACTTCATT	1268	False	NA	NA	False	ATTAAA	-20	NA	122752556	122688266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ES.27093.4	chr5	-	2832	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCTCTTTTTACTTCA	1255	False	NA	NA	False	ATTAAA	-18	NA	122752569	122688268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
ES.27093.6	chr5	-	3517	17	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	8	0	intron_retention	FALSE	canonical	1	2	junction_16	18.3030052177231	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTCTCTTTTTACTT	1268	False	NA	NA	False	ATTAAA	-16	NA	122752556	122688270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752256
ES.27093.8	chr5	-	4131	16	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_8	17.3107545249253	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTCTCTTTTTACTT	1240	False	NA	NA	False	ATTAAA	-16	NA	122752584	122688270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ES.27093.9	chr5	-	2555	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	-3	-290	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGTTGTGTCAAGATT	1240	False	NA	-3	True	AATAAA	-37	NA	122752584	122688560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
ES.27094.1	chr5	+	5015	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	-73	-6	-73	-2	multi-exon	TRUE	canonical	3	11	junction_11	5.09015935135848	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTTTGATTCCTTCG	NA	False	NA	NA	False	AATAAA	-27	NA	122781900	122822358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.10	chr5	+	175	1	Intergenic	novelGene_22563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATAACCTTTG	NA	False	NA	NA	False	NA	NA	NA	122810000	122810175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122810000_122810200
ES.27094.2	chr5	+	4229	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	-47	754	-47	11	multi-exon	FALSE	canonical	3	11	junction_11	5.09015935135848	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTGTTTTTGGTT	NA	False	NA	NA	False	AGTAAA	-25	NA	122781926	122821598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.3	chr5	+	813	4	FSM	ENSMUSG00000029468.18	ENSMUST00000086247.6	712	4	-134	33	-36	-33	multi-exon	TRUE	canonical	2	5	junction_3	10.4029910228848	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	122781937	122793292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122793041
ES.27094.4	chr5	+	5462	15	NNC	ENSMUSG00000029468.18	novel	4936	13	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_1	8.2699974088785	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAAGAATTCTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	122782065	122822348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122782262_122785411_122785855_122786310_122786490_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.5	chr5	+	4479	10	NIC	ENSMUSG00000029468.18	novel	4936	13	NA	NA	44	1	intron_retention	FALSE	canonical	0	0	junction_1	6.53952843091652	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTAAGAATTCTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	122782115	122822348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122782262_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.6	chr5	+	5693	13	NNC	ENSMUSG00000029468.18	novel	433	2	NA	NA	-2105	2	intron_retention	FALSE	canonical	0	0	junction_1	6.64736790015417	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATTCTCTTTGATTCC	NA	False	NA	NA	False	AATAAA	-23	NA	122786381	122822354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122787425_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.7	chr5	+	178	1	Intergenic	novelGene_22562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGAGGAAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	122797235	122797413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122797200_122797400
ES.27094.8	chr5	+	4350	9	NNC	ENSMUSG00000029468.18	novel	433	2	NA	NA	12270	0	intron_retention	FALSE	canonical	0	0	junction_1	6.23372881989584	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTAAGAATTCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	122800756	122822347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122800872_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27094.9	chr5	+	2629	8	ISM	ENSMUSG00000029468.18_ENSMUSG00000099324.3	ENSMUST00000199371.2	1848	13	13168	-1320	13168	-22	3prime_fragment	FALSE	canonical	3	11	junction_6	3.60272006083385	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATCTCTCCACCTTCA	NA	False	NA	NA	False	NA	NA	NA	122801654	122820756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ES.27095.1	chr5	+	1995	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	9	698	9	-4	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845615	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ES.27095.11	chr5	+	2706	10	NNC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	-19	-4	intron_retention	FALSE	canonical	2	2	junction_5	34.0978982734518	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845697	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857357_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461
ES.27095.13	chr5	+	1612	2	NNC	ENSMUSG00000029470.16	novel	513	2	NA	NA	-846	263	intron_retention	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGCACTGAAACTAGC	NA	False	NA	NA	False	NA	NA	NA	122861871	122863692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122862783_122862991
ES.27095.14	chr5	+	1013	2	FSM	ENSMUSG00000029470.16	ENSMUST00000139712.2	476	2	-82	-455	-82	-4	multi-exon	FALSE	canonical	3	92	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122865644	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122865904_122866349
ES.27095.2	chr5	+	1756	10	NIC	ENSMUSG00000029470.16	novel	1887	11	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	40.3071540382928	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845625	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122845851_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ES.27095.3	chr5	+	2592	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	-13	-692	1	-2	multi-exon	FALSE	canonical	3	9	junction_5	30.411182153938	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCTGGGCTGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	122845633	122867799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ES.27095.4	chr5	+	2707	10	NNC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	45.1712789772931	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845639	122867107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_122845851_122852451_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863296_122863430_122865260_122865355_122865461
ES.27095.5	chr5	+	1901	11	FSM	ENSMUSG00000029470.16	ENSMUST00000142664.3	1111	11	-74	-716	0	-5	multi-exon	FALSE	canonical	3	8	junction_9	29.8636903278881	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGATCCTTGTCTGTGC	NA	False	NA	10	True	ATTAAA	-15	NA	122845642	122867102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865807_122865904_122866349
ES.27095.6	chr5	+	2654	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	43	5	3	-5	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCACTGCTGGGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	122845649	122867796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ES.27095.7	chr5	+	3094	8	NIC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	4	-4	intron_retention	FALSE	canonical	3	15	junction_1	33.0620937149529	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845650	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122845851_122856375_122856448_122856563_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461
ES.27095.8	chr5	+	2591	11	FSM	ENSMUSG00000029470.16	ENSMUST00000142664.3	1111	11	-65	-1415	5	0	multi-exon	FALSE	canonical	3	8	junction_9	29.8636903278881	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGGGCTGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	122845651	122867801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865807_122865904_122866349
ES.27095.9	chr5	+	2314	10	ISM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	15	4	15	-4	intron_retention	FALSE	canonical	3	9	junction_5	31.9957558913948	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	False	NA	11	True	ATTAAA	-16	NA	122845661	122867103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807
ES.27096.1	chr5	-	94	1	Antisense	novelGene_ENSMUSG00000029470.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAAAATCTTA	2493	False	NA	NA	False	NA	NA	NA	122847388	122847294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_122847300_122847400
ES.27097.1	chr5	-	119	1	Antisense	novelGene_ENSMUSG00000029470.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1146	False	NA	NA	False	NA	NA	NA	122848735	122848616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_122848600_122848700
ES.27098.1	chr5	-	174	1	Intergenic	novelGene_22564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	122861320	122861146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122861100_122861300
ES.27099.1	chr5	+	178	1	Intergenic	novelGene_22565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	122902484	122902662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122902500_122902700
ES.271.1	chr1	-	5476	6	ISM	ENSMUSG00000037470.15	ENSMUST00000173999.8	3536	14	10599	-4019	-4688	564	3prime_fragment	FALSE	canonical	3	349	junction_2	16.9422548676379	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTGTGTCGCTGTGTG	NA	False	NA	NA	False	AATACA	-18	NA	36194293	36178543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153
ES.271.10	chr1	-	7497	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	8	-1504	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	92.4366833780023	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCAGTAGAGTGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	36283378	36180611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201437_36202293_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.12	chr1	-	6975	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-101	2159	-101	1296	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAAGTAATATCTCCC	NA	False	NA	-9	True	AATAAA	-15	NA	36283487	36181266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.14	chr1	-	6856	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-9	1293	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATATCAAGTAATATCT	NA	False	NA	-12	True	AATAAA	-12	NA	36283395	36181269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.16	chr1	-	3452	13	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	1616	1272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.004860992965	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTACCA	NA	False	NA	-33	True	NA	NA	NA	36202424	36181290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190840_36194166_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301
ES.271.17	chr1	-	6648	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	5	1099	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTGGATTATCAAAG	NA	False	NA	-2	True	AATAAA	-32	NA	36283381	36181463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.2	chr1	-	9010	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTCTGCTTGTTCATT	NA	False	NA	0	True	AATAAA	-19	NA	36283388	36179108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.20	chr1	-	6678	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-9	2364	-9	1091	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTGACTCTTGGAT	NA	False	NA	-10	True	AATAAA	-24	NA	36283395	36181471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.21	chr1	-	6206	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	8	2819	8	636	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTGGGTAACTAAGT	NA	False	NA	NA	False	AAAAAG	-18	NA	36283378	36181926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.22	chr1	-	5711	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-90	3412	-90	43	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCTGGCTGGGCACAG	NA	False	NA	42	True	AAAAAG	-13	NA	36283476	36182519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.23	chr1	-	5433	39	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	43	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	83.9273363328869	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGGTTATCAGTTTCC	NA	False	NA	29	True	NA	NA	NA	36283343	36182532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214171_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.27	chr1	-	5450	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_17	95.1644135941958	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283390	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.29	chr1	-	6069	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	22	0	intron_retention	FALSE	canonical	3	131	junction_20	76.7564177512813	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283364	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.3	chr1	-	7162	26	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	58445	2	-3226	-2	3prime_fragment	FALSE	canonical	3	131	junction_21	67.4260958383325	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTCTGCTTGTTCAT	NA	False	NA	-1	True	AATAAA	-18	NA	36224941	36179109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913
ES.271.30	chr1	-	5436	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	95.3704773089834	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283365	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.31	chr1	-	5441	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	108.443026516231	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283325	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213212_36213976_36214184_36215309_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.32	chr1	-	5509	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-58396	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_40	91.3952405763013	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	2915	False	NA	-1	True	NA	NA	NA	36342197	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150_36283328_36342183
ES.271.33	chr1	-	5503	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.655203544268	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283362	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194298_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216586_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.34	chr1	-	5219	33	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.3479583761262	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36247095	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36186542_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022
ES.271.36	chr1	-	5483	41	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_34	107.875504054442	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283378	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213212_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250477_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.37	chr1	-	5453	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.2025603647297	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTTTTCTTCTTAC	NA	False	NA	-1	True	NA	NA	NA	36283395	36182562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190887_36194298_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.4	chr1	-	8377	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	6	-626	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGTGTCTGGAAGGG	NA	False	NA	NA	False	ATTAAA	-27	NA	36283380	36179733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.42	chr1	-	717	2	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	6272	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36183333	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183267_36183316
ES.271.46	chr1	-	5449	40	NIC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_18	90.8942424667782	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283365	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213212_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.47	chr1	-	4563	33	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.4887352743701	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36249136	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185119_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066
ES.271.48	chr1	-	5538	40	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	108.360679297811	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283373	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195306_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201437_36202293_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.49	chr1	-	5609	40	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	92.0704286922746	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283382	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212710_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.5	chr1	-	8399	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	8	626	8	-626	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGTGTCTGGAAGGG	NA	False	NA	NA	False	ATTAAA	-27	NA	36283378	36179733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.50	chr1	-	5522	40	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	92.1065543650504	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283367	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255221_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.51	chr1	-	5570	40	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	83.7059990686384	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283378	36182566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215437_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.56	chr1	-	5309	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.5551029079069	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATGTGTGCTTTTTCT	NA	False	NA	-7	True	NA	NA	NA	36283198	36182568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185772_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.57	chr1	-	5628	42	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	107.698971265559	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATGTGTGCTTTTTCT	NA	False	NA	-7	True	NA	NA	NA	36283319	36182568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223178_36223302_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.59	chr1	-	5496	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	83.7059990686384	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAATGTGTGCTTTTTC	NA	False	NA	-8	True	NA	NA	NA	36283356	36182569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215388_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.64	chr1	-	5520	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.5370015017928	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAATGTGTGCTTTTTC	NA	False	NA	-8	True	NA	NA	NA	36283365	36182569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197272_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.66	chr1	-	5621	41	NNC	ENSMUSG00000037470.15	novel	5399	40	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	118.842119532597	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAATGTGTGCTTTTTC	NA	False	NA	-8	True	NA	NA	NA	36283362	36182569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250477_36250568_36251861_36251967_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.67	chr1	-	5532	40	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	83.7059990686384	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAAATGTGTGCTTTTT	NA	False	NA	-9	True	NA	NA	NA	36283360	36182570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216586_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.69	chr1	-	5540	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	93.6292388893555	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAAATGTGTGCTTTTT	NA	False	NA	-9	True	NA	NA	NA	36283371	36182570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266681_36269738_36269822_36273887_36274024_36283150
ES.271.71	chr1	-	5526	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	42	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.1811430904252	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAAATGTGTGCTTTTT	NA	False	NA	-9	True	NA	NA	NA	36283344	36182570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183325_36185106_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.72	chr1	-	5522	41	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	41	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	95.1934838893923	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAAAATGTGTGCTTTT	NA	False	NA	-10	True	NA	NA	NA	36283345	36182571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197272_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.74	chr1	-	5394	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-10	3649	-10	-190	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGCAGTTGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	36283396	36182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.75	chr1	-	5357	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	2	-191	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGTGCAGTTGCTAAG	NA	False	NA	NA	False	NA	NA	NA	36283384	36182757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.77	chr1	-	4593	33	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	19	4990	combination_of_known_junctions	FALSE	canonical	3	115	junction_13	79.013819004969	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTGGCAATGACTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	36283367	36195837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.78	chr1	-	3298	19	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	-1	38550	-1	28	5prime_fragment	FALSE	canonical	3	253	junction_2	55.4345348525717	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGACTCCCATGTGATG	NA	False	NA	NA	False	NA	NA	NA	36283387	36217657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.79	chr1	-	2602	19	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	44	39201	44	-623	5prime_fragment	FALSE	canonical	3	253	junction_2	55.4345348525717	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTAGCTGGGTACAGT	NA	False	NA	NA	False	NA	NA	NA	36283342	36218308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.8	chr1	-	7518	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	-9	-1500	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTAGAGTGTTTCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	36283395	36180607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.80	chr1	-	1915	17	ISM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	55	44388	55	1472	5prime_fragment	FALSE	canonical	3	396	junction_10	24.1375453132666	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACGTGGAAGTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	36283331	36223495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.81	chr1	-	1975	17	NNC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	11	1472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	107.192565477975	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACGTGGAAGTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	36283375	36223495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274026_36283136
ES.271.82	chr1	-	7063	7	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	35	-12608	intron_retention	FALSE	canonical	3	396	junction_1	23.9141984789139	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTGTCTTCTTCCCT	NA	False	NA	NA	False	AATAAA	-22	NA	36283351	36247663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36249146_36250470_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.271.83	chr1	-	182	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTTTTGTTGTT	1029	False	NA	NA	False	NA	NA	NA	36295639	36295457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36295500_36295600
ES.271.84	chr1	-	3373	7	NNC	ENSMUSG00000047180.9	novel	2598	4	NA	NA	-32908	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	36346668	36303738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36305635_36307736_36307791_36308293_36308783_36312418_36312665_36313453_36313528_36331120_36331538_36346471
ES.271.9	chr1	-	7506	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	24	1503	24	-1503	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCAGTAGAGTGTTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	36283362	36180610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ES.2710.1	chr10	+	560	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	1	2	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTCGGTGGTCATGGTG	NA	False	NA	NA	False	AATAAA	-44	NA	43400080	43400640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43400100_43400600
ES.27100.1	chr5	+	156	1	Intergenic	novelGene_22566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	122910162	122910318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122910200_122910300
ES.27101.1	chr5	-	4713	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	0	-3	intron_retention	TRUE	canonical	3	5	junction_2	23.9604265574786	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCGGGCCTCTCGGGG	4623	False	NA	-28	True	AATAAA	-19	NA	122917472	122869235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.10	chr5	-	2092	15	ISM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-78	3924	-2	-3284	5prime_fragment	FALSE	canonical	3	10	junction_1	24.0755613239074	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTCTGCTGTCTAGCCT	4621	False	NA	NA	False	NA	NA	NA	122917474	122875174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.11	chr5	-	2104	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	-56	2732	-46	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4577	False	NA	-22	True	AATAAA	-16	NA	122917518	122881413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.13	chr5	-	1706	14	NIC	ENSMUSG00000029471.14	novel	3139	14	NA	NA	-5	-2756	combination_of_known_junctions	FALSE	canonical	3	7	junction_12	21.8829592451625	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATCTCAAG	4645	False	NA	-46	True	NA	NA	NA	122917450	122881437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902017_122902322_122902366_122917314
ES.27101.14	chr5	-	1044	3	NNC	ENSMUSG00000029471.14	novel	446	3	NA	NA	17	-2756	intron_retention	FALSE	canonical	0	0	junction_1	39	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATCTCAAG	4667	False	NA	-46	True	NA	NA	NA	122917428	122881437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122881860_122901857_122902366_122917314
ES.27101.15	chr5	-	1142	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	-60	2	-3	-2	multi-exon	FALSE	canonical	3	71	junction_1	7.3824115301167	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGAGTTAGCAGTGTC	4647	False	NA	-2	True	AATAAA	-19	NA	122917448	122894340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.2	chr5	-	3854	10	ISM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	29293	-2013	3802	-5	3prime_fragment	FALSE	canonical	3	10	junction_2	24.339167235721	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCCCGGGCCTCTCGG	NA	False	NA	-30	True	AATAAA	-17	NA	122888103	122869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077
ES.27101.3	chr5	-	2852	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-72	-29	4	29	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACAACTTCAGGTTGGA	4627	False	NA	NA	False	NA	NA	NA	122917468	122871221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.4	chr5	-	2691	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	-6	14	intron_retention	FALSE	canonical	3	5	junction_2	23.9604265574786	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAACCCAA	4644	False	NA	NA	False	NA	NA	NA	122917451	122871236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.5	chr5	-	2580	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-59	230	7	-214	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTTTTTTTAA	4640	False	NA	NA	False	NA	NA	NA	122917455	122871480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.6	chr5	-	1732	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	-1	149	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	26.6367285176399	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCCATTGTGAATTCAG	4698	False	NA	NA	False	TTTAAA	-43	NA	122917397	122871741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122917314
ES.27101.7	chr5	-	2290	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-58	519	8	121	multi-exon	FALSE	canonical	3	10	junction_2	25.1434992702996	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	4641	False	NA	NA	False	TTTAAA	-15	NA	122917454	122871769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27101.8	chr5	-	1852	16	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	-6	121	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	26.465071320516	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	4644	False	NA	NA	False	TTTAAA	-15	NA	122917451	122871769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902017_122902322_122902366_122917314
ES.27101.9	chr5	-	2182	15	NIC	ENSMUSG00000029471.14	novel	2751	16	NA	NA	-3	121	intron_retention	FALSE	canonical	3	5	junction_2	23.9604265574786	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	4620	False	NA	NA	False	TTTAAA	-15	NA	122917475	122871769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122872309_122875495_122875597_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ES.27102.1	chr5	+	199	1	FSM	ENSMUSG00000105613.2	ENSMUST00000199279.2	6573	1	3134	3240	3134	-3240	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	122920721	122920920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122920700_122920900
ES.27102.2	chr5	+	327	1	FSM	ENSMUSG00000105613.2	ENSMUST00000199279.2	6573	1	3134	3112	3134	-3112	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122920721	122921048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122920700_122921000
ES.27103.1	chr5	-	1628	2	Antisense	novelGene_ENSMUSG00000105613.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122923901	122922173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_122922355_122922454
ES.27104.1	chr5	+	5951	1	Antisense	novelGene_ENSMUSG00000029472.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	122929777	122935728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_122929800_122935700
ES.27105.1	chr5	+	232	1	Intergenic	novelGene_22567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAAAACCCAA	8962	False	NA	NA	False	NA	NA	NA	122958494	122958726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122958500_122958700
ES.27106.1	chr5	+	184	1	Intergenic	novelGene_22568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATGGTGGAGGGCT	NA	False	NA	NA	False	NA	NA	NA	122972419	122972603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122972400_122972600
ES.27107.1	chr5	+	2067	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	38	2335	38	-2335	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTTGCCTACATTT	552	False	NA	20	True	AATAAA	-27	NA	122988148	123007019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ES.27107.10	chr5	+	2854	4	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	2353	52	-2353	intron_retention	FALSE	canonical	3	187	junction_1	18.6607133363712	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCTGTTGTAGTTTAA	675	False	NA	2	True	AATAAA	-9	NA	122988271	123007001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864
ES.27107.11	chr5	+	3862	5	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	1132	52	-1132	intron_retention	FALSE	canonical	3	187	junction_1	16.5586080332859	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTACAAAGATT	675	False	NA	NA	False	NA	NA	NA	122988271	123008222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182
ES.27107.12	chr5	+	1731	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	52	-2346	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	88.8070239339209	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	675	False	NA	9	True	AATAAA	-16	NA	122988271	123007008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123006099
ES.27107.13	chr5	+	2421	3	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	5193	52	1803	5prime_fragment	FALSE	canonical	3	187	junction_1	1.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTGTGTATGGGGGC	675	False	NA	NA	False	NA	NA	NA	122988271	123004161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122988362_122999751_122999971_123002049
ES.27107.14	chr5	+	136	1	Intergenic	novelGene_22571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAACTAAAAC	2629	False	NA	NA	False	NA	NA	NA	122993488	122993624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_122993500_122993600
ES.27107.15	chr5	+	670	1	Intergenic	novelGene_22573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7464	False	NA	NA	False	NA	NA	NA	123002564	123003234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123002600_123003200
ES.27107.2	chr5	+	3259	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	91	1090	-18	-1090	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTGGTGGTTCATTA	605	False	NA	NA	False	ATTAAA	-40	NA	122988201	123008264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ES.27107.3	chr5	+	993	3	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	111	6671	2	325	5prime_fragment	FALSE	canonical	3	187	junction_1	1.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAACCAAAAGTTTCAGT	625	False	NA	NA	False	ATTAAA	-20	NA	122988221	123002683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122988362_122999751_122999971_123002049
ES.27107.4	chr5	+	1701	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	127	2612	18	-2612	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTATTTCTGCATTTAA	641	False	NA	NA	False	AATGAA	-17	NA	122988237	123006742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ES.27107.5	chr5	+	3669	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	131	640	22	-640	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACACAGTGTAGATTTT	645	False	NA	NA	False	CATAAA	-11	NA	122988241	123008714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ES.27107.6	chr5	+	4356	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	34	-2348	intron_retention	FALSE	canonical	3	187	junction_1	14.0890028036054	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTTTAATATTG	657	False	NA	7	True	AATAAA	-14	NA	122988253	123007006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122988362_122999751_122999971_123002049_123004970_123005182_123005385_123006099
ES.27107.7	chr5	+	1729	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	37	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	660	False	NA	9	True	AATAAA	-16	NA	122988256	123007008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ES.27107.8	chr5	+	4568	4	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	37	-2346	intron_retention	FALSE	canonical	3	187	junction_1	15.369522511198	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	660	False	NA	9	True	AATAAA	-16	NA	122988256	123007008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_122988362_122999751_122999971_123002049_123005385_123006099
ES.27107.9	chr5	+	2660	5	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	147	2348	38	-2348	intron_retention	FALSE	canonical	3	187	junction_1	16.5586080332859	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTAGTTTAATATTG	661	False	NA	7	True	AATAAA	-14	NA	122988257	123007006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182
ES.27108.1	chr5	+	240	1	Intergenic	novelGene_22574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCATAAGATATCTACC	NA	False	NA	NA	False	NA	NA	NA	123010936	123011176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123010900_123011200
ES.27109.1	chr5	+	5482	1	Intergenic	novelGene_22576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAAACACCAAACTCTAT	NA	False	NA	NA	False	NA	NA	NA	123031715	123037197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123031700_123037200
ES.2711.1	chr10	-	1328	5	NNC	ENSMUSG00000019797.12	novel	357	2	NA	NA	-10	11574	intron_retention	TRUE	canonical	0	0	junction_1	401.595801148369	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGGGTTTTATGACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	43416974	43389554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_43390139_43391018_43391169_43406593_43406667_43408671_43409154_43416935
ES.2711.2	chr10	-	926	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-54	-12	-28	12	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTCTGTGGAAGCTGCG	NA	False	NA	0	True	AATAAA	-29	NA	43417018	43401116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ES.2711.3	chr10	-	877	5	NNC	ENSMUSG00000019797.12	novel	860	4	NA	NA	-6	-54	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	471.619285017057	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCCTCCTAATTGTCA	NA	False	NA	-1	True	AATAAA	-16	NA	43416970	43401208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_43401405_43406593_43406667_43408671_43409154_43413727_43413819_43416935
ES.2711.4	chr10	-	1433	1	NIC	ENSMUSG00000019797.12	novel	860	4	NA	NA	-802	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCCTCCTAATTGTCA	NA	False	NA	-1	True	AATAAA	-16	NA	43402641	43401208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43401200_43402600
ES.2711.5	chr10	-	4267	3	NNC	ENSMUSG00000019797.12	novel	860	4	NA	NA	5292	3822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	464	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAATGTATTAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	43411670	43405327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_43406667_43408671_43410034_43410104
ES.2711.6	chr10	-	1307	3	ISM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	9	4733	7	3288	5prime_fragment	FALSE	canonical	3	617	junction_2	155.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	43416955	43405861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_43406667_43408671_43409154_43416935
ES.27110.1	chr5	+	3266	1	Intergenic	novelGene_22577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGGTGGTGGTGGCAC	4760	False	NA	NA	False	AAAACA	-5	NA	123051871	123055137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123051900_123055100
ES.27111.1	chr5	+	306	1	Intergenic	novelGene_22578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123086604	123086910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123086600_123086900
ES.27112.1	chr5	-	3730	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	16	-1342	1	1070	multi-exon	TRUE	canonical	3	855	junction_8	345.39967790952	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTGTTCATGAA	NA	False	NA	NA	False	NA	NA	NA	122959341	122924451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.101	chr5	-	3429	11	NIC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	0	intron_retention	FALSE	canonical	2	8	junction_6	104.312031904282	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8583	False	NA	NA	False	TATAAA	-21	NA	123038429	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.102	chr5	-	3428	11	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	137.079393053807	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8593	False	NA	NA	False	TATAAA	-21	NA	123038419	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.103	chr5	-	3430	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	8606	0	intron_retention	FALSE	canonical	3	24	junction_11	94.6736892595642	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	2218	False	NA	NA	False	TATAAA	-21	NA	123047181	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123047076
ES.27112.104	chr5	-	3528	12	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-27	0	intron_retention	FALSE	canonical	2	8	junction_6	130.301620852138	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060197	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.105	chr5	-	3351	14	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.217996072867	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060160	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009530_123009783_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.106	chr5	-	3488	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	264	0	intron_retention	FALSE	canonical	0	0	junction_12	111.601846858474	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123059906	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059830
ES.27112.107	chr5	-	5064	23	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_21	156.589371941261	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	9389	False	NA	NA	False	TATAAA	-21	NA	123127157	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122556_123125784_123125870_123126930
ES.27112.108	chr5	-	8952	4	ISM	ENSMUSG00000029475.18	ENSMUST00000139674.2	4244	5	273	-4814	273	0	3prime_fragment	FALSE	canonical	3	305	junction_2	33.2365260920372	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	98	False	NA	NA	False	TATAAA	-21	NA	123018875	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123016717_123017307_123017470_123017551_123017716_123018235
ES.27112.109	chr5	-	3463	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_9	101.412992468038	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8595	False	NA	NA	False	TATAAA	-21	NA	123038417	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021449_123021526_123026592_123026818_123038211
ES.27112.11	chr5	-	6349	15	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	3	2	intron_retention	FALSE	canonical	3	855	junction_8	368.583284693028	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTTTTTTTTTATTTTT	NA	False	NA	-15	True	AATAAA	-24	NA	122959347	122925781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.111	chr5	-	3115	9	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-240	0	intron_retention	FALSE	canonical	0	0	junction_6	115.845195735516	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123020536	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019525_123019814_123020026_123020288_123020464
ES.27112.112	chr5	-	5085	20	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-15359	0	intron_retention	FALSE	canonical	2	5	junction_19	154.838080022102	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123106539	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123106128
ES.27112.113	chr5	-	5055	22	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	1	0	intron_retention	FALSE	canonical	2	8	junction_6	154.45587324555	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	9392	False	NA	NA	False	TATAAA	-21	NA	123127154	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126930
ES.27112.114	chr5	-	3598	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-31	0	intron_retention	FALSE	canonical	2	18	junction_3	124.721105538183	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060201	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017422_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.116	chr5	-	3537	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_8	101.881473834764	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8583	False	NA	NA	False	TATAAA	-21	NA	123038429	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020282_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.118	chr5	-	2080	7	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_4	152.551266428335	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060200	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017625_123026741_123026818_123059447_123059535_123059967
ES.27112.119	chr5	-	4975	23	NNC	ENSMUSG00000029475.18	novel	4999	23	NA	NA	46	0	intron_retention	FALSE	non_canonical	0	0	junction_8	158.004184482721	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	9996	False	NA	NA	False	TATAAA	-21	NA	123126550	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126529
ES.27112.12	chr5	-	2464	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	-49	-11	-4	1	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGTTTTTTTTTATTTT	NA	False	NA	-16	True	AATAAA	-23	NA	122959406	122925782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.120	chr5	-	3635	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_10	125.669623086356	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8581	False	NA	NA	False	TATAAA	-21	NA	123038431	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123023170_123023261_123026592_123026818_123038211
ES.27112.121	chr5	-	3584	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-718	0	intron_retention	FALSE	canonical	0	0	junction_12	111.601846858474	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060888	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123060716
ES.27112.122	chr5	-	3719	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_2	124.566219560343	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACACTGTGTTTGAGGG	8583	False	NA	NA	False	TATAAA	-20	NA	123038429	123008731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123011801_123011979_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.123	chr5	-	3709	11	NIC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	252	junction_10	41.3169456760782	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACACTGTGTTTGAGGG	8583	False	NA	NA	False	TATAAA	-20	NA	123038429	123008731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.125	chr5	-	3398	12	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-138	1	intron_retention	FALSE	non_canonical	0	0	junction_7	155.906944061551	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTACACTGT	NA	False	NA	NA	False	TATAAA	-11	NA	123059749	123008740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059648
ES.27112.126	chr5	-	3632	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_8	145.935178722914	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	8582	False	NA	NA	False	TATAAA	-10	NA	123038430	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123023170_123023261_123026592_123026818_123038211
ES.27112.127	chr5	-	3427	11	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	32	0	intron_retention	FALSE	canonical	0	0	junction_9	137.356324936277	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	NA	False	NA	NA	False	TATAAA	-10	NA	123060138	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020552_123021381_123021526_123059447_123059535_123060064
ES.27112.128	chr5	-	3245	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	127.974037080443	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	8576	False	NA	NA	False	TATAAA	-10	NA	123038436	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009530_123009832_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.129	chr5	-	3537	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	0	intron_retention	FALSE	canonical	1	2	junction_12	111.175536877498	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	NA	False	NA	NA	False	TATAAA	-10	NA	123060200	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123060064
ES.27112.13	chr5	-	2384	17	NIC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_3	560.644519587724	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959347	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.130	chr5	-	5003	23	FSM	ENSMUSG00000029475.18	ENSMUST00000086200.11	4999	23	-2	-2	1	0	multi-exon	FALSE	canonical	2	2	junction_22	156.230069803299	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	9948	False	NA	NA	False	TATAAA	-10	NA	123126598	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126529
ES.27112.131	chr5	-	4340	11	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_8	106.097549453321	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	8614	False	NA	NA	False	TATAAA	-10	NA	123038398	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123021526_123026592_123026818_123038211
ES.27112.132	chr5	-	3484	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-11	0	intron_retention	FALSE	canonical	2	18	junction_3	97.4504748132215	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	8583	False	NA	NA	False	TATAAA	-10	NA	123038429	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017422_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.135	chr5	-	5039	23	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-60	0	intron_retention	FALSE	canonical	0	0	junction_22	156.325285994692	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	9117	False	NA	NA	False	TATAAA	-10	NA	123127429	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123127324
ES.27112.136	chr5	-	3512	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-148	0	intron_retention	FALSE	canonical	3	8	junction_12	109.903366645431	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	NA	False	NA	NA	False	TATAAA	-10	NA	123059759	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059648
ES.27112.137	chr5	-	5032	20	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-8955	0	intron_retention	FALSE	canonical	0	0	junction_19	155.154324032326	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	NA	False	NA	NA	False	TATAAA	-10	NA	123100135	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123099766
ES.27112.138	chr5	-	3013	10	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-1160	0	intron_retention	FALSE	non_canonical	0	0	junction_4	106.744878733373	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	NA	False	NA	NA	False	TATAAA	-10	NA	123021456	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018242_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381
ES.27112.14	chr5	-	2562	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	-64	262	-64	0	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959466	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.140	chr5	-	3217	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	97.6127197426419	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTACACTG	8595	False	NA	NA	False	TATAAA	-10	NA	123038417	123008741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009530_123009832_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.141	chr5	-	3519	13	NNC	ENSMUSG00000029475.18	novel	4999	23	NA	NA	-148	0	intron_retention	FALSE	non_canonical	0	0	junction_8	135.601028347461	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATCTACAC	NA	False	NA	NA	False	TATAAA	-8	NA	123059759	123008743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059648
ES.27112.144	chr5	-	2999	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	9	524	9	99	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTGTTTTTATTATT	8603	False	NA	NA	False	TATAAA	-35	NA	123038409	123009254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.145	chr5	-	2972	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	119	99	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTGTTTTTATTATT	NA	False	NA	NA	False	TATAAA	-35	NA	123060051	123009254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.146	chr5	-	3006	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	269	90	intron_retention	FALSE	non_canonical	0	0	junction_8	133.643908259509	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATGCATACCAGTGTT	8863	False	NA	NA	False	TATAAA	-26	NA	123038149	123009263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020310_123020464_123020552_123021381_123021526_123026592_123026818_123037957
ES.27112.147	chr5	-	2903	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	224	87	intron_retention	FALSE	canonical	0	0	junction_12	111.601846858474	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTGAATGCATACCAGT	NA	False	NA	NA	False	TATAAA	-23	NA	123059946	123009266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059919
ES.27112.148	chr5	-	3286	12	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	15	87	intron_retention	FALSE	non_canonical	0	0	junction_7	132.324669588925	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTGAATGCATACCAGT	NA	False	NA	NA	False	TATAAA	-23	NA	123060155	123009266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.149	chr5	-	4843	23	FSM	ENSMUSG00000029475.18	ENSMUST00000046073.16	5180	23	-204	541	3	85	multi-exon	FALSE	canonical	3	10	junction_20	155.859758959168	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATTTGAATGCATACCA	9180	False	NA	NA	False	TATAAA	-21	NA	123127366	123009268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126930
ES.27112.15	chr5	-	4011	15	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	1753	junction_10	167.78157873636	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959347	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.150	chr5	-	3103	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-31	71	intron_retention	FALSE	non_canonical	0	0	junction_8	128.244558039188	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTTATGGGAGAT	NA	False	NA	NA	False	TATAAA	-7	NA	123060201	123009282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.151	chr5	-	2971	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-148	71	intron_retention	FALSE	canonical	3	8	junction_12	109.903366645431	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTTATGGGAGAT	NA	False	NA	NA	False	TATAAA	-7	NA	123059759	123009282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059648
ES.27112.152	chr5	-	2698	13	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-12	71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	127.974037080443	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTTATGGGAGAT	8582	False	NA	NA	False	TATAAA	-7	NA	123038430	123009282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009530_123009832_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.153	chr5	-	2963	4	NIC	ENSMUSG00000029475.18	novel	4244	5	NA	NA	-543	-1906	intron_retention	FALSE	canonical	3	299	junction_3	36.0647565729573	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTGTTTCCTAGCCCC	NA	False	NA	NA	False	NA	NA	NA	123019691	123015450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123016717_123017307_123017716_123018235_123018916_123019082
ES.27112.154	chr5	-	1982	4	ISM	ENSMUSG00000029475.18	ENSMUST00000139674.2	4244	5	500	1929	500	-1929	3prime_fragment	FALSE	canonical	3	305	junction_2	33.2365260920372	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	325	False	NA	NA	False	NA	NA	NA	123018648	123015473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123016717_123017307_123017470_123017551_123017716_123018235
ES.27112.155	chr5	-	2302	1	Intergenic	novelGene_22575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGTCTCTGGCAAATT	3766	False	NA	NA	False	NA	NA	NA	123032239	123029937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123029900_123032200
ES.27112.156	chr5	-	173	1	Intergenic	novelGene_22579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTTTAAAAAAATCACCAA	NA	False	NA	NA	False	NA	NA	NA	123100572	123100399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123100400_123100600
ES.27112.157	chr5	-	176	1	Intergenic	novelGene_22580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGCCTTATTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	123101673	123101497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123101500_123101700
ES.27112.17	chr5	-	2419	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	-4	-2	3	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959347	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.18	chr5	-	2524	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1165	junction_7	283.279241895499	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959357	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.19	chr5	-	4406	12	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	74	junction_3	586.507086047109	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959336	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122937401_122937538_122938513_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.2	chr5	-	3777	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	32	-1049	-13	1049	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTACCGTTAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	122959370	122924472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.22	chr5	-	4916	15	NIC	ENSMUSG00000029472.14	novel	3376	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	1728	junction_3	192.558710898409	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959347	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.26	chr5	-	4563	15	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1728	junction_3	192.75141281676	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959367	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.27	chr5	-	2240	15	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	74	junction_4	554.207105066439	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959341	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.28	chr5	-	2474	18	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	717.794488231583	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959339	122925783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122930970_122931049_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.29	chr5	-	2225	15	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	567.841459801402	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGTTTTTTTTTATT	NA	False	NA	-18	True	AATAAA	-21	NA	122959341	122925784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.3	chr5	-	2683	17	NNC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	553.551883295505	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959335	122925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937411_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.30	chr5	-	2523	6	NIC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	-1148	0	intron_retention	FALSE	canonical	3	1940	junction_1	157.506317333623	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122938941	122925785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401
ES.27112.33	chr5	-	2444	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	-27	-4	-13	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959370	122925785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.34	chr5	-	4995	16	NNC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	721.158592513156	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959350	122925785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122930970_122931049_122931499_122931622_122932479_122932555_122937401_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.36	chr5	-	2436	17	FSM	ENSMUSG00000029472.14	ENSMUST00000196640.5	2422	17	-16	2	-9	0	multi-exon	FALSE	canonical	0	0	junction_2	562.145162385793	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959366	122925785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926504_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.38	chr5	-	1938	13	NIC	ENSMUSG00000029472.14	novel	3376	16	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	597.34739450526	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAAGTGGGTTTTTTTT	NA	False	NA	-22	True	AATAAA	-17	NA	122959337	122925788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.4	chr5	-	8139	14	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	1728	junction_3	199.940553295401	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959341	122925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.40	chr5	-	2324	18	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	576.885037092107	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959315	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926443_122926484_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.41	chr5	-	3943	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	1728	junction_3	186.324161968687	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959356	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.42	chr5	-	2341	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	610.078450328772	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959372	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.43	chr5	-	2302	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	549.722289484022	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959341	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.44	chr5	-	3050	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1165	junction_8	293.313362956564	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959357	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.45	chr5	-	2995	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	855	junction_8	356.455040019854	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959341	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.46	chr5	-	1457	10	NNC	ENSMUSG00000029472.14	novel	3376	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	686.167474068201	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959341	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932551_122956003_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.47	chr5	-	2307	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	550.492611717501	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959339	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.48	chr5	-	7887	14	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1728	junction_3	199.940553295401	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959357	122925789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.49	chr5	-	2352	18	NNC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	793.339544720918	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGAAGTGGGTTTTTT	NA	False	NA	-24	True	AATAAA	-15	NA	122959341	122925790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956920_122957027_122957670_122957751_122959042_122959239_122959288
ES.27112.5	chr5	-	3603	7	ISM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	19574	0	701	0	intron_retention	FALSE	canonical	3	1728	junction_3	220.451556784907	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	9412	False	NA	NA	False	AATAAA	-2	NA	122939828	122925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401
ES.27112.50	chr5	-	8869	13	NIC	ENSMUSG00000029472.14	novel	3376	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	1728	junction_3	207.824628927586	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGAAGTGGGTTTTTT	NA	False	NA	-24	True	AATAAA	-15	NA	122959364	122925790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.52	chr5	-	5505	14	NIC	ENSMUSG00000029472.14	novel	3376	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	1728	junction_3	199.736186953437	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCTGAAGTGGGTTTT	NA	False	NA	-26	True	AATAAA	-13	NA	122959342	122925792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.53	chr5	-	3360	16	FSM	ENSMUSG00000029472.14	ENSMUST00000196423.5	3376	16	7	9	2	1	multi-exon	FALSE	canonical	3	855	junction_7	355.400894140062	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCTGAAGTGGGTTTT	NA	False	NA	-26	True	AATAAA	-13	NA	122959336	122925792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.54	chr5	-	6241	9	ISM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	14192	271	196	1	intron_retention	FALSE	canonical	3	1165	junction_8	364.268359180426	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCTGAAGTGGGTTTT	7477	False	NA	-26	True	AATAAA	-13	NA	122945210	122925792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192
ES.27112.55	chr5	-	3748	16	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_7	546.726232527152	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959347	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122939035_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.56	chr5	-	2847	17	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	591.609586081691	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959401	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937937_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.57	chr5	-	2313	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	131	junction_5	559.186313614106	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959341	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.58	chr5	-	7945	13	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	1753	junction_8	180.090255150022	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959348	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.6	chr5	-	2704	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	-28	-272	17	0	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959385	122925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.60	chr5	-	2488	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-13	0	intron_retention	FALSE	canonical	3	855	junction_7	349.508760023742	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959370	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.61	chr5	-	3228	7	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-652	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	789.163621958224	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122938445	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122933117_122936683
ES.27112.62	chr5	-	1240	8	Fusion	ENSMUSG00000029475.18_ENSMUSG00000029472.14	novel	2404	17	NA	NA	-46	0	multi-exon	FALSE	canonical	0	0	junction_6	931.947642393748	1693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	123060216	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_123059447_123059535_123059967
ES.27112.64	chr5	-	2177	14	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	739.408455392096	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959370	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122937401_122937538_122938513_122938696_122940192_122940283_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.65	chr5	-	2807	17	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	706.316542772254	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959376	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122930004_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122939035_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.66	chr5	-	2397	17	NNC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	553.551883295505	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959320	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932546_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.68	chr5	-	1438	10	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	682.94104367493	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959341	122925793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938580_122957717_122957751_122959042
ES.27112.7	chr5	-	2763	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	-3	0	-3	0	multi-exon	FALSE	canonical	3	1165	junction_8	284.126264845403	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959405	122925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.70	chr5	-	2370	17	NNC	ENSMUSG00000029472.14	novel	2413	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	532.965373963215	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGTCTGAAGTGGGT	NA	False	NA	-29	True	AATAAA	-10	NA	122959343	122925795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938639_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.72	chr5	-	5804	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	22	-2	intron_retention	FALSE	canonical	3	1165	junction_8	293.270478114203	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGTCTGAAGTGGGT	NA	False	NA	-29	True	AATAAA	-10	NA	122959380	122925795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.74	chr5	-	2457	17	NNC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	562.620011503101	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGTCTGAAGTGGGT	NA	False	NA	-29	True	AATAAA	-10	NA	122959343	122925795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937568_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.78	chr5	-	2059	15	NNC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	631.316974624459	1238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTGTCTGAAGTGGG	NA	False	NA	-30	True	AATAAA	-9	NA	122959336	122925796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940940_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.79	chr5	-	2208	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	9	-41	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	581.035535344727	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCATTACATGCTATCT	NA	False	NA	-68	True	NA	NA	NA	122959324	122925834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.8	chr5	-	2971	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	-22	-10	intron_retention	FALSE	canonical	3	855	junction_7	356.417333410646	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAACCTGTGCATC	NA	False	NA	NA	False	NA	NA	NA	122959379	122925531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.80	chr5	-	863	6	NNC	ENSMUSG00000029472.14	novel	752	4	NA	NA	1	5193	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	858.340398676423	1150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTGTTTCATTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	122959341	122950726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_122950850_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.81	chr5	-	2292	5	ISM	ENSMUSG00000029472.14	ENSMUST00000200058.5	1174	7	-262	7155	0	4858	5prime_fragment	FALSE	canonical	3	1889	junction_1	167.276716849656	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTGTGTGTGGTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	122959343	122951061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.82	chr5	-	159	1	Intergenic	novelGene_22569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATTTTAA	9758	False	NA	NA	False	NA	NA	NA	122978936	122978777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122978800_122978900
ES.27112.83	chr5	-	680	2	Antisense	novelGene_ENSMUSG00000029474.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCGTCCAATTGATG	10	True	NA	NA	False	NA	NA	NA	122988496	122987516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_122987809_122988108
ES.27112.84	chr5	-	3509	1	Intergenic	novelGene_22570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122994681	122991172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122991200_122994700
ES.27112.85	chr5	-	1161	1	Intergenic	novelGene_22572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	122994883	122993722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_122993700_122994900
ES.27112.86	chr5	-	3872	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-29	214	intron_retention	FALSE	canonical	0	0	junction_12	111.601846858474	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGCATATCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	123060199	123008513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059956
ES.27112.87	chr5	-	5409	23	FSM	ENSMUSG00000029475.18	ENSMUST00000046073.16	5180	23	-227	-2	-20	2	multi-exon	FALSE	canonical	3	10	junction_20	155.859758959168	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTGAGGGTTTCTG	9157	False	NA	NA	False	TATAAA	-26	NA	123127389	123008725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126930
ES.27112.88	chr5	-	3711	11	NIC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	2	1	intron_retention	FALSE	canonical	3	252	junction_10	38.3374490544168	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGAGGGTTTCT	8596	False	NA	NA	False	TATAAA	-25	NA	123038416	123008726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.9	chr5	-	3362	14	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	16	-10	intron_retention	FALSE	canonical	3	74	junction_4	603.257518093305	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAACCTGTGCATC	NA	False	NA	NA	False	NA	NA	NA	122959386	122925531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ES.27112.90	chr5	-	3665	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTTTGAGGGTTT	NA	False	NA	NA	False	TATAAA	-23	NA	123060218	123008728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.91	chr5	-	3548	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	-14	-2	-14	-1	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTTTGAGGGTTT	8580	False	NA	NA	False	TATAAA	-23	NA	123038432	123008728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.93	chr5	-	3393	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	8652	0	intron_retention	FALSE	non_canonical	0	0	junction_8	129.213002441705	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	2264	False	NA	NA	False	TATAAA	-21	NA	123047135	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123047076
ES.27112.94	chr5	-	3559	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_8	101.881473834764	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8576	False	NA	NA	False	TATAAA	-21	NA	123038436	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ES.27112.95	chr5	-	3389	12	NNC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	1503	0	intron_retention	FALSE	canonical	0	0	junction_11	101.171648594549	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123054284	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123054220
ES.27112.96	chr5	-	3576	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_12	111.601846858474	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060200	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123060036
ES.27112.98	chr5	-	3661	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	-37	0	intron_retention	FALSE	non_canonical	0	0	junction_8	128.244558039188	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060207	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020297_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27112.99	chr5	-	3517	13	NNC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_8	128.244558039188	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060129	123008730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020231_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
ES.27113.1	chr5	+	179	1	Intergenic	novelGene_22581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAATAAATGGA	594	False	NA	NA	False	NA	NA	NA	123142852	123143031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123142900_123143000
ES.27114.1	chr5	+	1664	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-75	286	-75	14	multi-exon	FALSE	canonical	3	186	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGTGTTTGT	4799	False	NA	10	True	NA	NA	NA	123153061	123168233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123153630_123167137
ES.27114.2	chr5	+	1960	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-70	-15	-70	15	multi-exon	FALSE	canonical	3	186	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGGAGGTAGTTACA	4804	False	NA	NA	False	ATTAAA	-17	NA	123153066	123168534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123153630_123167137
ES.27114.3	chr5	+	1742	3	NNC	ENSMUSG00000049686.15	novel	1875	2	NA	NA	-70	9	intron_retention	FALSE	canonical	3	9	junction_2	0.5	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTCCTCATGTCTGTG	4804	False	NA	5	True	NA	NA	NA	123153066	123168228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123153630_123165997_123166086_123167137
ES.27114.4	chr5	+	1325	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-57	607	-57	-307	multi-exon	FALSE	canonical	3	186	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTGAGAATAAGCTTTC	4817	False	NA	NA	False	TTTAAA	-32	NA	123153079	123167912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123153630_123167137
ES.27114.5	chr5	+	4075	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	-57	-2143	-57	2143	multi-exon	FALSE	canonical	3	186	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGTGTGAGTGCATGT	4817	False	NA	NA	False	NA	NA	NA	123153079	123170662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123153630_123167137
ES.27114.6	chr5	+	1501	2	NNC	ENSMUSG00000049686.15	novel	1875	2	NA	NA	-39	4	intron_retention	TRUE	canonical	0	0	junction_1	0	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACACCTCTTCCTCATGT	4835	False	NA	0	True	NA	NA	NA	123153097	123168223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123153513_123167137
ES.27115.1	chr5	-	1405	1	Intergenic	novelGene_22582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAAAATGAGCCATGTC	7943	False	NA	NA	False	NA	NA	NA	123170323	123168918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123168900_123170300
ES.27115.2	chr5	-	634	2	Intergenic	novelGene_22583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	7943	False	NA	NA	False	NA	NA	NA	123170323	123168947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123169000_123169741
ES.27116.1	chr5	-	177	1	Intergenic	novelGene_22584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAATCCTGAGA	9991	False	NA	NA	False	NA	NA	NA	123171482	123171305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123171300_123171500
ES.27117.1	chr5	-	1767	2	NIC	ENSMUSG00000029477.15	novel	904	4	NA	NA	-4003	-365	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	2939	False	NA	NA	False	NA	NA	NA	123179778	123174289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123175424_123179145
ES.27118.1	chr5	-	175	1	Intergenic	novelGene_22585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGAGGGAGCAGAGAT	878	False	NA	NA	False	NA	NA	NA	123181839	123181664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123181700_123181800
ES.27119.1	chr5	-	276	1	Intergenic	novelGene_22586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGAGTCTTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	123183133	123182857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123182900_123183100
ES.2712.1	chr10	+	177	1	Intergenic	novelGene_2068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGATCGAGCAGGGC	NA	False	NA	3	True	NA	NA	NA	43424791	43424968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_43424800_43425000
ES.27120.1	chr5	-	177	2	Antisense	novelGene_ENSMUSG00000080836.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	123205284	123193786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123193884_123205204
ES.27120.2	chr5	-	178	1	Intergenic	novelGene_22587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAGTAATACTTAAA	NA	False	NA	NA	False	NA	NA	NA	123194964	123194786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123194800_123195000
ES.27120.3	chr5	-	205	1	Intergenic	novelGene_22588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAATTCCCCAAACCC	NA	False	NA	NA	False	NA	NA	NA	123199581	123199376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123199400_123199600
ES.27120.4	chr5	-	202	1	Intergenic	novelGene_22589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAAGCTTGCTGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	123205284	123205082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123205100_123205300
ES.27121.1	chr5	+	178	1	Intergenic	novelGene_22590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTGTTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	123209251	123209429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123209300_123209400
ES.27122.1	chr5	+	1604	10	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	-19	317	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	37.8176260427089	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTACCTGTGTTGTCTCT	NA	False	NA	23	True	NA	NA	NA	123214318	123255389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123214559_123236237_123236357_123237899_123238017_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ES.27122.10	chr5	+	1692	7	NIC	ENSMUSG00000054434.15	novel	1256	11	NA	NA	2353	317	intron_retention	FALSE	canonical	3	101	junction_5	8.17346655682615	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTACCTGTGTTGTCTCT	619	False	NA	23	True	NA	NA	NA	123240316	123255389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253789_123254264_123254334_123254706
ES.27122.11	chr5	+	2628	6	NIC	ENSMUSG00000054434.15	novel	1256	11	NA	NA	3501	321	intron_retention	FALSE	canonical	3	106	junction_1	7.73563184232549	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTTGTCTCTTGCC	1767	False	NA	27	True	NA	NA	NA	123241464	123255393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123254334_123254706
ES.27122.12	chr5	+	335	1	Intergenic	novelGene_22592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCGAAAAAACCAAAAAAAAG	1785	False	NA	NA	False	NA	NA	NA	123250497	123250832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123250500_123250800
ES.27122.2	chr5	+	1751	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	-5	418	-5	322	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTCTCTTGCCT	NA	False	NA	28	True	NA	NA	NA	123214332	123255394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ES.27122.3	chr5	+	3095	11	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	1	456	intron_retention	FALSE	canonical	3	93	junction_3	11.5969823661158	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGGCAGCCGGCCAC	NA	False	NA	NA	False	NA	NA	NA	123214338	123256268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123254334_123254706
ES.27122.4	chr5	+	5978	1	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	11	-18105	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAGGTTAGAATTTGAA	NA	False	NA	NA	False	NA	NA	NA	123214348	123220326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123214300_123220300
ES.27122.5	chr5	+	2615	12	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	19	456	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	33.8936108950364	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGGCAGCCGGCCAC	NA	False	NA	NA	False	NA	NA	NA	123214356	123256268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123214559_123236237_123236357_123237899_123238017_123239673_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ES.27122.6	chr5	+	2642	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	25	-503	25	503	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGCTGTATCCCACGA	NA	False	NA	NA	False	NA	NA	NA	123214362	123256315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ES.27122.7	chr5	+	1883	13	NNC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	-21	313	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	42.4076611265255	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACCTACCTGTGTTGT	NA	False	NA	19	True	NA	NA	NA	123214366	123255385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123214559_123236237_123236357_123237646_123237822_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ES.27122.8	chr5	+	2557	10	ISM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	31	425	-19	315	intron_retention	FALSE	canonical	3	93	junction_3	12.2202018532156	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTACCTGTGTTGTCT	NA	False	NA	21	True	NA	NA	NA	123214368	123255387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723
ES.27122.9	chr5	+	1750	12	NNC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	-18	317	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	34.6150017637937	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTACCTGTGTTGTCTCT	NA	False	NA	23	True	NA	NA	NA	123214369	123255389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254223_123254334_123254706
ES.27123.1	chr5	-	178	1	Intergenic	novelGene_22591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	123226461	123226283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123226300_123226500
ES.27124.1	chr5	-	1707	4	NNC	ENSMUSG00000029449.12	novel	2208	5	NA	NA	10892	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.69967317119759	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCATGTAATGGCACTT	NA	False	NA	NA	False	NA	NA	NA	123259567	123256243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123257658_123258358_123258494_123258573_123258684_123259519
ES.27124.2	chr5	-	1920	5	FSM	ENSMUSG00000029449.12	ENSMUST00000031401.6	2208	5	284	4	-12	-4	multi-exon	FALSE	canonical	1	1	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCATGTAATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123270471	123256244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123257658_123258358_123258494_123258573_123258684_123269929_123270018_123270297
ES.27125.1	chr5	-	4008	2	ISM	ENSMUSG00000090086.8	ENSMUST00000159072.2	957	3	186	0	186	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGTTGCTGAACATT	NA	False	NA	1	True	AATAAA	-20	NA	123275986	123271785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123272494_123272686
ES.27125.2	chr5	-	6859	1	Genic_Genomic	ENSMUSG00000090086.8	novel	NA	NA	NA	NA	-292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGTTGCTGAACATT	NA	False	NA	1	True	AATAAA	-20	NA	123278644	123271785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_123271800_123278600
ES.27125.3	chr5	-	4388	2	FSM	ENSMUSG00000090086.8	ENSMUST00000160099.2	1017	2	374	-3745	374	-3	multi-exon	FALSE	canonical	1	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGTGAGTTGCTGAAC	NA	False	NA	-2	True	AATAAA	-17	NA	123277978	123271788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123276130_123277931
ES.27125.4	chr5	-	1124	3	NNC	ENSMUSG00000090086.8	novel	957	3	NA	NA	-207	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAATGAGTGAGT	NA	False	NA	-10	True	AATAAA	-9	NA	123276379	123271796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123272465_123272686_123272781_123276017
ES.27125.5	chr5	-	4554	2	NIC	ENSMUSG00000090086.8	novel	1697	6	NA	NA	350	-11	intron_retention	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAATGAGTGAGT	NA	False	NA	-10	True	AATAAA	-9	NA	123278002	123271796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123276130_123277781
ES.27125.6	chr5	-	1072	4	NIC	ENSMUSG00000090086.8	novel	957	3	NA	NA	402	-11	intron_retention	FALSE	canonical	1	1	junction_3	0.942809041582063	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAATGAGTGAGT	NA	False	NA	-10	True	AATAAA	-9	NA	123277950	123271796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123272494_123272686_123272781_123276017_123276130_123277781
ES.27125.7	chr5	-	1327	5	NNC	ENSMUSG00000090086.8	novel	848	5	NA	NA	-263	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAATGAGTGAGT	NA	False	NA	-10	True	AATAAA	-9	NA	123279415	123271796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123272494_123272686_123272956_123276017_123276130_123277931_123278037_123279271
ES.27126.1	chr5	+	2516	6	ISM	ENSMUSG00000038384.17	ENSMUST00000056053.9	7362	16	17817	-25	-1935	25	3prime_fragment	TRUE	canonical	0	0	junction_1	2.65329983228432	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAACCAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	123298836	123305498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123299193_123299813_123299981_123301216_123301349_123301434_123301555_123301633_123301772_123303895
ES.27126.2	chr5	+	3595	6	ISM	ENSMUSG00000038384.17	ENSMUST00000163030.9	8857	17	18699	-3	-1817	3	3prime_fragment	FALSE	canonical	0	0	junction_1	2.65329983228432	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCCGTCTCTCTTGCTCT	NA	False	NA	34	True	TATAAA	-34	NA	123298954	123306695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123299193_123299813_123299981_123301216_123301349_123301434_123301555_123301633_123301772_123303895
ES.27126.3	chr5	+	2704	2	ISM	ENSMUSG00000038384.17	ENSMUST00000163030.9	8857	17	21445	164	257	-164	3prime_fragment	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTGTCATCTGTATGT	NA	False	NA	NA	False	AATAAA	-23	NA	123301700	123306528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123301772_123303895
ES.27127.1	chr5	-	126	1	Antisense	novelGene_ENSMUSG00000038384.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACGG	7173	False	NA	NA	False	AATAAA	-18	NA	123303181	123303055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123303100_123303200
ES.27128.1	chr5	-	148	1	ISM	ENSMUSG00000104606.2	ENSMUST00000195921.2	2162	2	2031	709	2031	-709	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAGAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	123327620	123327472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123327500_123327600
ES.27129.1	chr5	-	149	1	NIC	ENSMUSG00000104606.2	novel	2162	2	NA	NA	1304	-1435	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAGAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	123328347	123328198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123328200_123328300
ES.2713.1	chr10	+	143	1	Intergenic	novelGene_2069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	43430804	43430947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_43430800_43430900
ES.27130.1	chr5	+	181	1	Intergenic	novelGene_22593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTACG	7618	False	NA	NA	False	NA	NA	NA	123352549	123352730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123352500_123352700
ES.27131.1	chr5	+	949	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	43	1605	-25	-1	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACGTCTTGTGCAAATT	NA	False	NA	16	True	ATTAAA	-17	NA	123366295	123386589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ES.27131.10	chr5	+	748	1	FSM	ENSMUSG00000029440.16	ENSMUST00000196137.2	774	1	49	-23	49	23	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366369	123367117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123366400_123367100
ES.27131.2	chr5	+	1267	5	NNC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-22	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.2181938960794	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGCTGTCAGTATAT	NA	False	NA	21	True	NA	NA	NA	123366298	123387023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123366508_123377604_123377814_123379894_123379987_123384256_123384346_123386355
ES.27131.3	chr5	+	837	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-12	3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTTGTGCAAATTAGGC	NA	False	NA	20	True	ATTAAA	-21	NA	123366308	123386593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ES.27131.4	chr5	+	1365	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	62	1170	-6	434	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	22	True	NA	NA	NA	123366314	123387024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ES.27131.6	chr5	+	1260	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	-4	434	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	22	True	NA	NA	NA	123366316	123387024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ES.27131.8	chr5	+	2196	3	ISM	ENSMUSG00000029440.16	ENSMUST00000133386.2	2634	5	96	3793	28	1890	5prime_fragment	FALSE	canonical	3	158	junction_2	11.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123366348	123379538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123366508_123372656_123372760_123377604
ES.27131.9	chr5	+	3298	4	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	36	431	intron_retention	FALSE	canonical	3	15	junction_1	87.2098363463409	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGTGCTGTCAGTAT	NA	False	NA	19	True	NA	NA	NA	123366356	123387021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123366508_123377604_123379997_123384256_123384346_123386355
ES.27132.1	chr5	-	407	1	FSM	ENSMUSG00000094664.2	ENSMUST00000148282.2	333	1	-61	-13	-61	13	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAAAGGGAGCCT	4036	False	NA	NA	False	TTTAAA	-13	NA	123393937	123393530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123393500_123393900
ES.27133.1	chr5	-	186	1	Intergenic	novelGene_22594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAAGGTTCCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	123403335	123403149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123403100_123403300
ES.27134.1	chr5	-	234	1	Intergenic	novelGene_22595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTTTTGTTACTGT	NA	False	NA	NA	False	NA	NA	NA	123431440	123431206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123431200_123431400
ES.27135.1	chr5	-	205	1	Intergenic	novelGene_22596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123449982	123449777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123449800_123450000
ES.27136.1	chr5	+	3841	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	17	860	17	50	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTTCCTGGGCTGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	123482527	123512195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
ES.27136.2	chr5	+	3438	8	NNC	ENSMUSG00000029438.10	novel	4718	6	NA	NA	-11	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.9970842444753	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAATAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123482551	123512108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080_123509192_123509277_123509391_123509596
ES.27136.3	chr5	+	2687	2	NNC	ENSMUSG00000029438.10	novel	4718	6	NA	NA	26653	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAATAATAAAAAA	732	False	NA	NA	False	NA	NA	NA	123509215	123512108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123509391_123509596
ES.27137.1	chr5	-	3595	2	Antisense	novelGene_ENSMUSG00000029438.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGTTTCCCACTAC	NA	False	NA	NA	False	AAGAAA	-1	NA	123490392	123475494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123475511_123486813
ES.27137.2	chr5	-	1450	2	NNC	ENSMUSG00000087336.3	novel	360	3	NA	NA	11	-8020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGTGAAAGCATG	149	False	NA	NA	False	NA	NA	NA	123482489	123480550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123481839_123482327
ES.27138.1	chr5	-	2839	4	Antisense	novelGene_ENSMUSG00000065191.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGCGAGAATGCACTT	NA	False	NA	NA	False	NA	NA	NA	123510013	123492484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123494100_123499252_123499420_123507393_123507516_123509078
ES.27138.2	chr5	-	4964	1	Antisense	novelGene_ENSMUSG00000029438.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	123497467	123492503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123492500_123497500
ES.27138.3	chr5	-	4852	3	Antisense	novelGene_ENSMUSG00000065191.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGAAGAGAGATAAGTGT	NA	False	NA	NA	False	NA	NA	NA	123510013	123495624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123499420_123507393_123507516_123509078
ES.27138.4	chr5	-	4854	3	Antisense	novelGene_ENSMUSG00000065191.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGAAGAGAGATAAGTGT	NA	False	NA	NA	False	NA	NA	NA	123510013	123495624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123499420_123507393_123507522_123509082
ES.27138.6	chr5	-	3683	3	Antisense	novelGene_ENSMUSG00000104830.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAAATGCCACAGGAGC	NA	False	NA	NA	False	NA	NA	NA	123510012	123504534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123504860_123505091_123507516_123509078
ES.27139.1	chr5	+	138	1	Intergenic	novelGene_22597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	3056	False	NA	NA	False	NA	NA	NA	123513674	123513812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123513700_123513800
ES.2714.1	chr10	-	163	2	Antisense	novelGene_ENSMUSG00000111368.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	43435117	43430180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_43430273_43435046
ES.27140.1	chr5	+	178	1	Intergenic	novelGene_22598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAATCT	NA	False	NA	NA	False	NA	NA	NA	123525840	123526018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123525800_123526000
ES.27141.1	chr5	+	7369	17	FSM	ENSMUSG00000038342.16	ENSMUST00000068237.12	7303	17	-66	0	-64	0	multi-exon	TRUE	canonical	3	7	junction_15	14.8438486838825	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTCTGTGTGACCTTC	NA	False	NA	20	True	AATAAA	-21	NA	123532796	123595995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
ES.27141.2	chr5	+	7294	17	NNC	ENSMUSG00000038342.16	novel	7303	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.4605091685235	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGTTCTGTGTGACC	NA	False	NA	17	True	AATAAA	-18	NA	123532855	123595992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123533406_123578098_123578206_123578875_123578962_123580357_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
ES.27141.3	chr5	+	5894	18	NNC	ENSMUSG00000038342.16	novel	7303	17	NA	NA	7	1921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.3776791305246	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGCTGAGTTAATTTC	NA	False	NA	NA	False	NA	NA	NA	123532869	123593530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123589641_123589887_123589924_123590600_123590731_123591454
ES.27141.4	chr5	+	151	1	Intergenic	novelGene_22600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	123566538	123566689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123566500_123566700
ES.27141.5	chr5	+	210	1	Intergenic	novelGene_22601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	123585903	123586113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123585900_123586100
ES.27142.1	chr5	-	2486	8	NNC	ENSMUSG00000086700.3	novel	524	2	NA	NA	-47994	-1017	intron_retention	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGGCCACGCCTCCAC	NA	False	NA	NA	False	NA	NA	NA	123584014	123532739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123533403_123578095_123578960_123580355_123580433_123580788_123580831_123581090_123581263_123581936_123582028_123582506_123582595_123583525
ES.27142.2	chr5	-	1829	9	NNC	ENSMUSG00000086700.3	novel	524	2	NA	NA	-47994	-1017	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGGCCACGCCTCCAC	NA	False	NA	NA	False	NA	NA	NA	123584014	123532739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123533403_123578095_123578206_123578875_123578960_123580342_123580433_123580788_123580831_123581090_123581263_123581936_123582028_123582506_123582595_123583525
ES.27142.3	chr5	-	156	1	Intergenic	novelGene_22599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	123551134	123550978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123551000_123551100
ES.27143.1	chr5	+	181	1	Intergenic	novelGene_22602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	123623880	123624061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123623900_123624100
ES.27144.1	chr5	+	516	2	NNC	ENSMUSG00000086753.2	novel	1862	2	NA	NA	89	-2233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTCTAGCATGTGCT	4783	False	NA	NA	False	ATTAAA	-17	NA	123646546	123649841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123646583_123649361
ES.27145.1	chr5	-	2396	8	NNC	ENSMUSG00000029433.17	novel	3386	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	301.080774299956	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCTGCAGTGTGGCTG	8956	False	NA	NA	False	AATAAA	-19	NA	123662205	123647830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123649282_123649378_123649642_123650627_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.10	chr5	-	1210	5	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	2	-194	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	267.106135272105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCAGGCTGTCCTGCA	8967	False	NA	-4	True	ATTAAA	-25	NA	123662194	123649961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662133
ES.27145.11	chr5	-	6361	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	1	-5681	1	-200	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8966	False	NA	-10	True	ATTAAA	-19	NA	123662195	123649967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.12	chr5	-	1361	6	NNC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	0	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	266.410660447363	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8956	False	NA	-10	True	ATTAAA	-19	NA	123662205	123649967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658255_123661317_123661445_123662133
ES.27145.13	chr5	-	1326	6	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	1	-200	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	255.210031150815	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8966	False	NA	-10	True	ATTAAA	-19	NA	123662195	123649967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661439_123662133
ES.27145.14	chr5	-	1453	5	FSM	ENSMUSG00000029433.17	ENSMUST00000139398.8	1663	5	10	200	1	-200	multi-exon	FALSE	canonical	3	603	junction_2	57.6649807075317	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8966	False	NA	-10	True	ATTAAA	-19	NA	123662195	123649967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123650771_123655799_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.15	chr5	-	1419	7	NNC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	-1	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	311.339935690164	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAGTCTTCAGGCTGT	8954	False	NA	-10	True	ATTAAA	-19	NA	123662207	123649967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123658882_123658958_123661317_123661445_123662133
ES.27145.16	chr5	-	6481	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	4	-3897	1	-201	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGTCTTCAGGCTG	8966	False	NA	-11	True	ATTAAA	-18	NA	123662195	123649968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.17	chr5	-	6475	4	NIC	ENSMUSG00000029433.17	novel	2588	4	NA	NA	1	-201	intron_retention	FALSE	canonical	1	1	junction_3	304.120955469293	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGTCTTCAGGCTG	8966	False	NA	-11	True	ATTAAA	-18	NA	123662195	123649968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123656129_123658103_123658236_123661317_123661439_123662133
ES.27145.18	chr5	-	1317	6	NNC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	-3	-207	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	269.579969582312	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGAGAGTGAGTCTTC	8959	False	NA	-17	True	ATTAAA	-12	NA	123662202	123649974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123650771_123655799_123655882_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.19	chr5	-	1131	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	16	429	16	169	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGGGGGGCTTGTCTG	8938	False	NA	2	True	NA	NA	NA	123662223	123650196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.2	chr5	-	1547	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	30	-1	-3	1	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTTTCAGAATTGTTT	8952	False	NA	-11	True	AATAAA	-26	NA	123662209	123649766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.20	chr5	-	733	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111586.8	719	6	-11	-3	-1	3	multi-exon	TRUE	canonical	2	3	junction_1	270.536208297522	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAGAAAAATCTTAAATC	8954	False	NA	NA	False	ATTAAA	-17	NA	123662207	123654323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123654516_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.21	chr5	-	1659	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-15	-963	-5	-359	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGAGTAGAGTGTTGA	8950	False	NA	NA	False	NA	NA	NA	123662211	123654685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.22	chr5	-	748	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-19	-48	-9	48	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCATAATCGAAATATCT	8946	False	NA	NA	False	NA	NA	NA	123662215	123655600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.4	chr5	-	1434	5	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	297.850948462482	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGTTTTCAGAATTGT	8966	False	NA	-13	True	AATAAA	-24	NA	123662195	123649768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.5	chr5	-	6687	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	-6	-4093	0	-5	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGACCAGTTTTCAGAA	8956	False	NA	-17	True	AATAAA	-20	NA	123662205	123649772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.6	chr5	-	1318	4	NIC	ENSMUSG00000029433.17	novel	1663	5	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	339.202987408228	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGACCAGTTTTCAGA	8966	False	NA	-18	True	AATAAA	-19	NA	123662195	123649773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123658103_123658236_123661317_123661445_123662133
ES.27145.7	chr5	-	6557	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	-2	-5874	1	-7	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGGACCAGTTTTCAG	8963	False	NA	-19	True	AATAAA	-18	NA	123662198	123649774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ES.27145.8	chr5	-	1397	5	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	-2	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	294.445665615916	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCAGGGACCAGTTTTC	8960	False	NA	-21	True	AATAAA	-16	NA	123662201	123649776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123661317_123661445_123662133
ES.27145.9	chr5	-	1981	7	NIC	ENSMUSG00000114278.3	novel	1897	7	NA	NA	13	187	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	250.348701259308	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTGTCCTGCAGCGT	7682	False	NA	0	True	ATTAAA	-29	NA	123663479	123649957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133_123662728_123663372
ES.27146.1	chr5	+	176	2	Intergenic	novelGene_22604	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	123676238	123809980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123676289_123809854
ES.27146.2	chr5	+	189	1	Intergenic	novelGene_22603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAAACCTTA	NA	False	NA	NA	False	NA	NA	NA	123676238	123676427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123676200_123676400
ES.27146.3	chr5	+	181	1	Intergenic	novelGene_22606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCCACACT	NA	False	NA	NA	False	NA	NA	NA	123749400	123749581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123749400_123749600
ES.27146.4	chr5	+	173	1	Intergenic	novelGene_22608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	123769771	123769944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123769800_123769900
ES.27146.5	chr5	+	175	1	Intergenic	novelGene_22609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123791018	123791193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123791000_123791200
ES.27146.6	chr5	+	186	1	Intergenic	novelGene_22610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGACTTACAGAGACAAA	NA	False	NA	NA	False	NA	NA	NA	123794263	123794449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123794300_123794400
ES.27146.7	chr5	+	419	1	Intergenic	novelGene_22611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCTCTCATGAGAT	161	False	NA	NA	False	NA	NA	NA	123809802	123810221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123809800_123810200
ES.27146.8	chr5	+	177	1	Intergenic	novelGene_22612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	162	False	NA	NA	False	NA	NA	NA	123809803	123809980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123809800_123810000
ES.27147.1	chr5	+	202	1	Intergenic	novelGene_22613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAACAAACCAAAAACAAG	6165	False	NA	NA	False	NA	NA	NA	123815806	123816008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123815800_123816000
ES.27148.1	chr5	-	6037	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	50	-1852	-9	1852	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTAGTTCTTTATTAT	9983	False	NA	NA	False	NA	NA	NA	123711051	123664869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.10	chr5	-	6751	10	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-16	-443	intron_retention	FALSE	canonical	3	161	junction_1	30.3453374700767	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9976	False	NA	-11	True	ATTAAA	-20	NA	123711058	123667164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123670057_123671920_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.11	chr5	-	5565	11	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-12	-444	intron_retention	FALSE	canonical	3	161	junction_1	28.8043399507782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGTCTCAATTTACA	9980	False	NA	-12	True	ATTAAA	-19	NA	123711054	123667165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123670057_123671920_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.13	chr5	-	3645	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	29	-444	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	60.3082988409631	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGTCTCAATTTACA	9996	False	NA	-12	True	ATTAAA	-19	NA	123711072	123667165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.16	chr5	-	3803	13	NNC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-26	-445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.6636405191638	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTGTCTCAATTTAC	10000	False	NA	-13	True	ATTAAA	-18	NA	123711068	123667166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710896
ES.27148.19	chr5	-	3130	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	30	1075	-29	-1075	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTGCTTCTCGTGGCG	9997	False	NA	NA	False	AAGAAA	-30	NA	123711071	123667796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.2	chr5	-	5601	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	-7	-1359	-7	1359	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGTCCCTTTGATAG	9993	False	NA	0	True	NA	NA	NA	123711108	123665362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.20	chr5	-	4460	11	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	28	-2087	intron_retention	FALSE	canonical	3	140	junction_1	32.9194471399506	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTCTCAAGTCT	10020	False	NA	-7	True	NA	NA	NA	123711014	123668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123669285_123669887_123670057_123671920_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.21	chr5	-	2119	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	29	2087	29	-2087	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTCTCAAGTCT	9996	False	NA	-7	True	NA	NA	NA	123711072	123668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.22	chr5	-	3304	12	NNC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	20	-2087	intron_retention	FALSE	non_canonical	0	0	junction_3	62.4744575905999	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTCTCAAGTCT	9987	False	NA	-7	True	NA	NA	NA	123711081	123668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673281_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.23	chr5	-	1989	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-17	-2087	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	60.3082988409631	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTCTCAAGTCT	9975	False	NA	-7	True	NA	NA	NA	123711059	123668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.24	chr5	-	2049	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-26	-2087	combination_of_known_splicesites	FALSE	canonical	1	7	junction_11	53.049329919978	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTCTCAAGTCT	10000	False	NA	-7	True	NA	NA	NA	123711068	123668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123710942
ES.27148.25	chr5	-	1847	12	ISM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	36	2955	-23	-2955	5prime_fragment	FALSE	canonical	3	161	junction_1	28.1134067014945	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTATTTGAACTTTTTA	10003	False	NA	NA	False	NA	NA	NA	123711065	123669676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.26	chr5	-	177	1	Intergenic	novelGene_22605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTACATTGTG	7582	False	NA	NA	False	NA	NA	NA	123676752	123676575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123676600_123676800
ES.27148.27	chr5	-	1245	8	NIC	ENSMUSG00000029434.13	novel	532	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	74.1113337885533	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGTGTTCCTATGTAA	10000	False	NA	NA	False	ATTAAA	-18	NA	123711068	123692827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123693074_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.3	chr5	-	5493	13	NNC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-29	1354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.2557428065462	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGCAAGTGTCCCTTT	9997	False	NA	-5	True	NA	NA	NA	123711071	123665367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123669219_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.4	chr5	-	5429	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-16	1354	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	60.3082988409631	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGCAAGTGTCCCTTT	9976	False	NA	-5	True	NA	NA	NA	123711058	123665367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.6	chr5	-	6155	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-27	1349	intron_retention	FALSE	canonical	3	161	junction_1	28.1134067014945	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGTTGAGCAAGTGTC	9999	False	NA	-10	True	NA	NA	NA	123711069	123665372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.7	chr5	-	3801	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	-8	442	-8	-442	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTCTCAATTTACACA	9992	False	NA	-10	True	ATTAAA	-21	NA	123711109	123667163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.8	chr5	-	4366	12	NIC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	29	-443	intron_retention	FALSE	canonical	3	161	junction_1	28.1134067014945	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9996	False	NA	-11	True	ATTAAA	-20	NA	123711072	123667164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27148.9	chr5	-	7511	13	NNC	ENSMUSG00000029434.13	novel	4235	13	NA	NA	-27	-443	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.6970941969168	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTCTCAATTTACAC	9999	False	NA	-11	True	ATTAAA	-20	NA	123711069	123667164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123698587_123699447_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ES.27149.1	chr5	-	7902	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-21	1	intron_retention	FALSE	canonical	3	18	junction_16	11.5125987750618	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGGTTGGTTTTTGGC	9881	False	NA	-4	True	AATAAA	-19	NA	123822409	123715856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.10	chr5	-	8150	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-13	-4	intron_retention	FALSE	canonical	0	0	junction_17	15.1511847721556	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGGTTGGTTGGTTT	9889	False	NA	-9	True	AATAAA	-14	NA	123822401	123715861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.11	chr5	-	6239	9	NIC	ENSMUSG00000049550.18	novel	3544	12	NA	NA	-1993	-4	intron_retention	FALSE	canonical	3	39	junction_8	8.07677998957505	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGGTTGGTTGGTTT	NA	False	NA	-9	True	AATAAA	-14	NA	123752228	123715861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130
ES.27149.12	chr5	-	5669	24	NNC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-68	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	15.4430473892107	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGTCTCTTTGGTT	9834	False	NA	-22	True	AATAAA	-1	NA	123822456	123715874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720776_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.13	chr5	-	8207	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-11	-5	intron_retention	FALSE	canonical	2	3	junction_18	14.3774267516827	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGTCTCTTTGGTT	9891	False	NA	-22	True	AATAAA	-1	NA	123822399	123715874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.14	chr5	-	5670	17	NNC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	5838	-5	intron_retention	FALSE	canonical	0	0	junction_10	15.2897790615169	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGTCTCTTTGGTT	NA	False	NA	-22	True	AATAAA	-1	NA	123768499	123715874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753258_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287
ES.27149.15	chr5	-	8177	26	NNC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	19	-5	intron_retention	FALSE	canonical	0	0	junction_25	16.6042886026472	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATAAATGTTTTGGG	9628	False	NA	-33	True	ATTAAA	-18	NA	123822662	123715885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822596
ES.27149.16	chr5	-	613	2	NNC	ENSMUSG00000049550.18	novel	596	2	NA	NA	-881	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGAGTTCTGTATCT	3600	False	NA	-53	True	AATAAA	-44	NA	123717501	123715905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123716192_123717174
ES.27149.17	chr5	-	7692	25	NIC	ENSMUSG00000049550.18	novel	4387	25	NA	NA	14	7	intron_retention	FALSE	canonical	0	0	junction_17	16.0804725434989	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGGAAAGCAGTATTAAA	NA	False	NA	-70	True	AATAAA	-27	NA	123794067	123715922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956
ES.27149.19	chr5	-	7950	27	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	1	-220	intron_retention	FALSE	canonical	2	5	junction_18	15.4693818605634	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCGTCTCTCTGTCTT	9906	False	NA	NA	False	GATAAA	-38	NA	123822384	123716149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.2	chr5	-	8253	27	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-7	0	intron_retention	FALSE	canonical	2	5	junction_18	15.4693818605634	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	9895	False	NA	-5	True	AATAAA	-18	NA	123822395	123715857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.20	chr5	-	7852	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-5	-222	intron_retention	FALSE	canonical	0	0	junction_17	15.1511847721556	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTGCGTCTCTCTGTC	9897	False	NA	NA	False	GATAAA	-36	NA	123822393	123716151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.21	chr5	-	7599	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-13	-222	intron_retention	FALSE	canonical	3	18	junction_16	11.5125987750618	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTGCGTCTCTCTGTC	9889	False	NA	NA	False	GATAAA	-36	NA	123822401	123716151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.22	chr5	-	7657	25	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	17	311	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	10.473428680873	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAATGTGTCTTCTTTTC	9626	False	NA	NA	False	AAAAAG	-4	NA	123822664	123716584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.23	chr5	-	7186	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-36	308	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	11.5125987750618	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATACAATGTGTCTTCTT	9866	False	NA	NA	False	AAAAAG	-1	NA	123822424	123716587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.24	chr5	-	5089	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	313	731	17	307	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATACAATGTGTCTTCT	9922	False	NA	NA	False	TTTAAA	-23	NA	123822368	123716588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.25	chr5	-	7254	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-8	299	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	15.0279739153354	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAGTCTATACAATG	9894	False	NA	NA	False	TTTAAA	-15	NA	123822396	123716596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.26	chr5	-	6598	24	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-21	-67	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	14.6687430505926	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTATATTTAGGTT	9881	False	NA	NA	False	ACTAAA	-13	NA	123822409	123716962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.27	chr5	-	6192	24	NNC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	2082	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.7170984603207	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	NA	False	NA	NA	False	AATAAA	-22	NA	123791889	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123751668_123751847_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514
ES.27149.28	chr5	-	6850	25	NNC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-47	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	13.5983429341797	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9855	False	NA	NA	False	AATAAA	-22	NA	123822435	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784175_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.29	chr5	-	4587	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	271	1275	-22	4	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9880	False	NA	NA	False	AATAAA	-22	NA	123822410	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.3	chr5	-	5871	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	262	0	-31	0	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	9871	False	NA	-5	True	AATAAA	-18	NA	123822419	123715857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.30	chr5	-	4982	25	FSM	ENSMUSG00000049550.18	ENSMUST00000111561.8	5883	25	-362	1263	-19	4	multi-exon	FALSE	canonical	2	3	junction_17	15.5321686795144	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9590	False	NA	NA	False	AATAAA	-22	NA	123822700	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.31	chr5	-	4358	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111564.8	5609	24	-24	1275	-21	4	multi-exon	FALSE	canonical	3	15	junction_9	12.9445523936893	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9881	False	NA	NA	False	AATAAA	-22	NA	123822409	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.32	chr5	-	4543	24	NNC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	14.8792239161801	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9894	False	NA	NA	False	AATAAA	-22	NA	123822396	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784175_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.33	chr5	-	6711	25	NNC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.5983429341797	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9883	False	NA	NA	False	AATAAA	-22	NA	123822407	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753258_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.34	chr5	-	6905	25	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-72	4	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	10.473428680873	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCCTTGTTTTCTGG	9830	False	NA	NA	False	AATAAA	-22	NA	123822460	123717132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.35	chr5	-	6881	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-16	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	15.1511847721556	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9886	False	NA	NA	False	AATAAA	-21	NA	123822404	123717133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.36	chr5	-	4920	25	NNC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.8913280239293	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9590	False	NA	NA	False	AATAAA	-21	NA	123822700	123717133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720776_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123735507_123735576_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784175_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.37	chr5	-	6626	25	NIC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	11.5125987750618	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9880	False	NA	NA	False	AATAAA	-21	NA	123822410	123717133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.38	chr5	-	6956	27	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	15.4693818605634	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9916	False	NA	NA	False	AATAAA	-21	NA	123822374	123717133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.39	chr5	-	6659	24	NIC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	13.8903347283564	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCGTCCTTGTTTTCTG	9877	False	NA	NA	False	AATAAA	-21	NA	123822413	123717133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.4	chr5	-	5618	24	NNC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	15.0130378121094	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	9894	False	NA	-5	True	AATAAA	-18	NA	123822396	123715857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721700_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.41	chr5	-	4443	23	NIC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	13.7179378254101	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTCCGTCCTTGTTTTC	9904	False	NA	NA	False	AATAAA	-19	NA	123822386	123717135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.42	chr5	-	6594	25	NNC	ENSMUSG00000049550.18	novel	5609	24	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.3598954460756	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTCCGTCCTTGTTTTC	9880	False	NA	NA	False	AATAAA	-19	NA	123822410	123717135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784175_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.43	chr5	-	4615	10	ISM	ENSMUSG00000049550.18	ENSMUST00000154672.2	3544	12	1405	-371	1046	-6	3prime_fragment	FALSE	canonical	3	39	junction_9	7.65135346697192	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGCACTTCCGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	123754480	123717142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130
ES.27149.44	chr5	-	4598	15	NIC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	5332	-3172	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	10.9965207855828	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGCCTTCTGGTCTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	123769005	123720685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287
ES.27149.45	chr5	-	6565	8	NNC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	5387	163	intron_retention	FALSE	non_canonical	0	0	junction_4	19.6240169388514	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAGGAAAGAAAC	NA	False	NA	NA	False	AATACA	-7	NA	123768950	123727968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123728909_123741661_123741783_123747301_123747409_123749884_123754360_123760818_123760903_123761275_123761334_123765356_123765474_123768287
ES.27149.46	chr5	-	214	1	Intergenic	novelGene_22607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGGCTGAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	123759436	123759222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123759200_123759400
ES.27149.47	chr5	-	4262	1	FSM	ENSMUSG00000049550.18	ENSMUST00000199018.2	2692	1	-1570	0	-1570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	123775907	123771645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123771600_123775900
ES.27149.48	chr5	-	1381	5	ISM	ENSMUSG00000049550.18	ENSMUST00000063905.12	4589	26	14	67039	11	-12289	5prime_fragment	FALSE	canonical	3	36	junction_1	9.63068014212911	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTATATGACTACTATT	9916	False	NA	NA	False	NA	NA	NA	123822374	123783934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.5	chr5	-	8127	25	NIC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	-19	0	intron_retention	FALSE	canonical	3	32	junction_10	10.473428680873	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	9883	False	NA	-5	True	AATAAA	-18	NA	123822407	123715857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.6	chr5	-	6481	9	FSM	ENSMUSG00000049550.18	ENSMUST00000137602.8	1505	9	-3698	-1278	1593	-1	multi-exon	FALSE	canonical	3	45	junction_3	5.88960949469487	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTGGTTGGTTTTTG	NA	False	NA	-6	True	AATAAA	-17	NA	123753933	123715858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884
ES.27149.7	chr5	-	8032	27	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-16	-2	intron_retention	FALSE	canonical	2	5	junction_18	16.0101668881677	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTGGTTGGTTTTT	9886	False	NA	-7	True	AATAAA	-16	NA	123822404	123715859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.8	chr5	-	7990	26	NIC	ENSMUSG00000049550.18	novel	5883	25	NA	NA	-7	-2	intron_retention	FALSE	canonical	2	3	junction_18	15.0279739153354	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTGGTTGGTTTTT	9895	False	NA	-7	True	AATAAA	-16	NA	123822395	123715859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ES.27149.9	chr5	-	6312	17	NNC	ENSMUSG00000049550.18	novel	6133	24	NA	NA	5358	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	15.2344951918336	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGGTTGGTTGGTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	123768979	123715859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123717566_123718062_123718188_123720776_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287
ES.2715.1	chr10	-	173	1	Intergenic	novelGene_2070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGTGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	43439645	43439472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43439500_43439600
ES.27150.1	chr5	+	251	1	Intergenic	novelGene_22614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAACAAAAAAATG	NA	False	NA	NA	False	AATAAA	-37	NA	123827325	123827576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123827300_123827600
ES.27151.1	chr5	+	1042	3	Antisense	novelGene_ENSMUSG00000029427.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123838858	123841652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_123839186_123840625_123840744_123841055
ES.27152.1	chr5	-	6007	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	94	-1815	-88	1807	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCACTGGCTCTCGTT	6491	False	NA	NA	False	NA	NA	NA	123859013	123834549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.10	chr5	-	3163	13	NIC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-85	34	intron_retention	FALSE	non_canonical	2	263	junction_12	51.9141251384331	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGACTTGGGTAGATA	6494	False	NA	-4	True	AATAAA	-19	NA	123859010	123837827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.17	chr5	-	2217	10	NIC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-2256	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	128.882471104587	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	NA	False	NA	-38	True	AATAAA	-20	NA	123848801	123837861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123848749
ES.27152.18	chr5	-	3908	13	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	69	1497	69	0	intron_retention	FALSE	canonical	3	331	junction_12	37.2588542795162	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	6466	False	NA	-38	True	AATAAA	-20	NA	123859038	123837861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554
ES.27152.19	chr5	-	3292	9	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	10432	1497	-2130	0	3prime_fragment	FALSE	canonical	3	360	junction_8	37.6389093890883	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	NA	False	NA	-38	True	AATAAA	-20	NA	123848675	123837861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444
ES.27152.20	chr5	-	2816	13	NIC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-88	0	intron_retention	FALSE	non_canonical	2	263	junction_12	51.9071687406149	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	6491	False	NA	-38	True	AATAAA	-20	NA	123859013	123837861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.21	chr5	-	2782	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	114.849425477642	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAGGTTTAATAAATTA	6415	False	NA	-39	True	AATAAA	-19	NA	123859089	123837862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847336_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.22	chr5	-	2680	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-81	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	114.59669439763	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAGGTTTAATAAATTA	6498	False	NA	-39	True	AATAAA	-19	NA	123859006	123837862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847542_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.23	chr5	-	2500	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	96	1690	-86	-193	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATTCTAACAATTTTA	6493	False	NA	NA	False	AATATA	-12	NA	123859011	123838054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.24	chr5	-	2335	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	34	1917	34	-420	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGACTGGGTGTGAG	6431	False	NA	-24	True	NA	NA	NA	123859073	123838281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.26	chr5	-	1064	8	ISM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	53	10008	53	-22	5prime_fragment	FALSE	non_canonical	2	263	junction_7	50.4364623530822	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTTCTTGCTTGCTTT	6450	False	NA	NA	False	AATAAA	-13	NA	123859054	123846372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.3	chr5	-	4254	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	37	-5	37	-3	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCAAGTTCCTTTTTT	6434	False	NA	NA	False	AATAAA	-18	NA	123859070	123836359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.5	chr5	-	4296	15	NIC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-71	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_10	141.971540695123	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTATCCAAGTTCCT	6508	False	NA	NA	False	AATAAA	-13	NA	123858996	123836364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123848749_123848871_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.6	chr5	-	2839	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	-12	1459	-12	38	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTGGGTAGATATGAC	6385	False	NA	0	True	AATAAA	-23	NA	123859119	123837823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.7	chr5	-	2673	14	NNC	ENSMUSG00000029427.12	novel	4286	14	NA	NA	-80	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.845818949483	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGACTTGGGTAGATA	6499	False	NA	-4	True	AATAAA	-19	NA	123859005	123837827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842633_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ES.27152.9	chr5	-	2613	13	NNC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	-85	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	115.592765777102	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGACTTGGGTAGATA	6494	False	NA	-4	True	AATAAA	-19	NA	123859010	123837827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123858855
ES.27153.1	chr5	-	201	1	Intergenic	novelGene_22615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAACCCATGGAACTTG	4119	False	NA	NA	False	NA	NA	NA	123861385	123861184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_123861200_123861400
ES.27154.1	chr5	+	185	1	Intergenic	novelGene_22616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	123861688	123861873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123861700_123861900
ES.27155.1	chr5	+	129	1	Intergenic	novelGene_22617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123862136	123862265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123862100_123862300
ES.27156.1	chr5	+	2625	3	Antisense	novelGene_ENSMUSG00000029422.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGAGGCCGGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	123879419	123887497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_123881744_123883019_123883174_123887350
ES.27157.1	chr5	-	2346	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTATGCTATTTGCT	4323	False	NA	NA	False	AATAAA	-16	NA	123887475	123866487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.10	chr5	-	2439	13	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	221.040280391506	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4324	False	NA	NA	False	AATAAA	-11	NA	123887474	123866492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123884834_123884934_123887351
ES.27157.11	chr5	-	9337	9	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	64	junction_6	184.593091352304	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4356	False	NA	NA	False	AATAAA	-11	NA	123887442	123866492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017
ES.27157.12	chr5	-	2231	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-10	-536	0	-1	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	4354	False	NA	NA	False	AATAAA	-10	NA	123887444	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.13	chr5	-	2311	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	214.653401195108	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	4356	False	NA	NA	False	AATAAA	-10	NA	123887442	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.14	chr5	-	2335	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	4	5	1	-1	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	4350	False	NA	NA	False	AATAAA	-10	NA	123887448	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.15	chr5	-	2302	11	NIC	ENSMUSG00000029422.16	novel	1685	11	NA	NA	-109	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	205.342056091781	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	8057	False	NA	NA	False	AATAAA	-10	NA	123883741	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559
ES.27157.16	chr5	-	2404	13	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	220.358467426751	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	4356	False	NA	NA	False	AATAAA	-10	NA	123887442	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.17	chr5	-	2242	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	27	1	1	-1	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCATTGTATGCTA	4350	False	NA	NA	False	AATAAA	-10	NA	123887448	123866493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.2	chr5	-	4136	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	120	junction_7	125.029774231758	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTATGCTATTTGCT	4356	False	NA	NA	False	AATAAA	-16	NA	123887442	123866487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.20	chr5	-	2117	11	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	-98	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	166.25718029607	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGGTGTGCAGTATTT	4356	False	NA	NA	False	ATTAAA	-25	NA	123887442	123866590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.21	chr5	-	2356	13	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	3	-103	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	221.822564226456	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACAATTGGTGTGCAG	4326	False	NA	NA	False	ATTAAA	-20	NA	123887472	123866595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123884834_123884934_123887351
ES.27157.22	chr5	-	2130	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	3	86	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTATAGCCTCTATTAT	4326	False	NA	78	True	ATTAAA	-18	NA	123887472	123866700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.23	chr5	-	1962	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	2	-369	0	86	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTATAGCCTCTATTAT	4323	False	NA	78	True	ATTAAA	-18	NA	123887475	123866700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.24	chr5	-	3864	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	10	4	intron_retention	FALSE	canonical	3	120	junction_7	125.029774231758	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4333	False	NA	-4	True	AATAAA	-17	NA	123887465	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.25	chr5	-	6771	8	NIC	ENSMUSG00000029422.16	novel	1665	11	NA	NA	140	4	intron_retention	FALSE	canonical	3	26	junction_4	172.537248270674	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	8645	False	NA	-4	True	AATAAA	-17	NA	123883153	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123873960_123874621_123874745_123877554_123877759_123878734_123881742_123883017
ES.27157.26	chr5	-	6849	11	NNC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	178	4	intron_retention	FALSE	canonical	0	0	junction_10	202.721508478997	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4546	False	NA	-4	True	AATAAA	-17	NA	123887252	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123880920_123881700_123881742_123883017_123883175_123883559_123886071_123886664
ES.27157.27	chr5	-	5830	7	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	-32	4	intron_retention	FALSE	canonical	3	120	junction_5	147.956543920466	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	8134	False	NA	-4	True	AATAAA	-17	NA	123883664	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123880920_123881700_123881742_123883017
ES.27157.28	chr5	-	5968	9	NNC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	41	4	intron_retention	FALSE	canonical	3	61	junction_3	151.105923113556	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4409	False	NA	-4	True	AATAAA	-17	NA	123887389	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123867420_123868517_123868608_123869099_123869330_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017
ES.27157.29	chr5	-	4182	11	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	200.393837230589	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4360	False	NA	-4	True	AATAAA	-17	NA	123887438	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123873960_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.3	chr5	-	2172	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	5	-582	3	1	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGTATGCTATTTGCT	4326	False	NA	NA	False	AATAAA	-16	NA	123887472	123866487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.30	chr5	-	4642	9	NIC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	-10	4	intron_retention	FALSE	canonical	3	434	junction_8	36.0327541967028	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTTAATTTAAGTTAC	4336	False	NA	-4	True	AATAAA	-17	NA	123887462	123866782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123881742_123883017_123883175_123887351
ES.27157.31	chr5	-	2039	12	NIC	ENSMUSG00000029422.16	novel	1685	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	203.720761731176	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGTGTTAATTTAAGT	4353	False	NA	-7	True	AATAAA	-14	NA	123887445	123866785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123884834_123884934_123887351
ES.27157.32	chr5	-	1953	11	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	166.25718029607	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4324	False	NA	-8	True	AATAAA	-13	NA	123887474	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.33	chr5	-	4788	9	NIC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	403	junction_6	48.5798312059645	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4334	False	NA	-8	True	AATAAA	-13	NA	123887464	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.34	chr5	-	2141	13	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	221.822564226456	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4350	False	NA	-8	True	AATAAA	-13	NA	123887448	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123884834_123884934_123887351
ES.27157.35	chr5	-	4898	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	64	junction_6	174.229591680874	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4324	False	NA	-8	True	AATAAA	-13	NA	123887474	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.36	chr5	-	1968	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-40	-243	1	0	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4324	False	NA	-8	True	AATAAA	-13	NA	123887474	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.38	chr5	-	1765	9	NIC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	167.265320673474	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4354	False	NA	-8	True	AATAAA	-13	NA	123887444	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.39	chr5	-	4872	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	72	junction_6	172.469643061548	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4328	False	NA	-8	True	AATAAA	-13	NA	123887470	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.4	chr5	-	7771	9	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	925	0	intron_retention	FALSE	canonical	3	114	junction_8	134.195228585073	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	5293	False	NA	NA	False	AATAAA	-15	NA	123886505	123866488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123881742_123883017_123883175_123883559
ES.27157.40	chr5	-	2646	2	NIC	ENSMUSG00000029422.16	novel	1609	8	NA	NA	1833	0	intron_retention	FALSE	canonical	3	495	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	NA	False	NA	-8	True	AATAAA	-13	NA	123869924	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123868608_123869099
ES.27157.41	chr5	-	1924	11	NIC	ENSMUSG00000029422.16	novel	1685	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	187.724692035971	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4350	False	NA	-8	True	AATAAA	-13	NA	123887448	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.42	chr5	-	2018	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	214.653401195108	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4356	False	NA	-8	True	AATAAA	-13	NA	123887442	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.43	chr5	-	2033	12	NNC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	211.942725773414	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4356	False	NA	-8	True	AATAAA	-13	NA	123887442	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_123867420_123868517_123868608_123869099_123869330_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.46	chr5	-	2028	12	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	213.721491743479	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4324	False	NA	-8	True	AATAAA	-13	NA	123887474	123866786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123873884_123873960_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.48	chr5	-	2753	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	64	junction_7	142.047288248546	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTGGTGTTAATTTAA	4326	False	NA	-9	True	AATAAA	-12	NA	123887472	123866787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123881742_123883017_123883175_123887351
ES.27157.49	chr5	-	1969	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	5	296	5	-2	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTGGTGTTAATTTA	4328	False	NA	-10	True	AATAAA	-11	NA	123887470	123866788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.5	chr5	-	4502	11	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	201.606572313504	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4356	False	NA	NA	False	AATAAA	-15	NA	123887442	123866488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123873960_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.52	chr5	-	1861	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	159.49836486642	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAACTGGTGTTAATT	4356	False	NA	-12	True	AATAAA	-9	NA	123887442	123866790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123881700_123881742_123883017_123883175_123887351
ES.27157.55	chr5	-	5444	9	NIC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	1	62	intron_retention	FALSE	canonical	3	72	junction_6	146.632565874706	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGCATAGATTTTTCT	4356	False	NA	NA	False	ATTAAA	-19	NA	123887442	123866967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123874745_123877554_123877759_123878734_123878926_123880841_123881742_123883017_123883175_123887351
ES.27157.56	chr5	-	1750	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-8	-57	1	57	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCTCATGCATAGATT	4356	False	NA	NA	False	ATTAAA	-14	NA	123887442	123866972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ES.27157.57	chr5	-	2198	7	NIC	ENSMUSG00000029422.16	novel	815	7	NA	NA	2	297	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	174.864471329465	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTTGAATATAAAGTAG	4325	False	NA	NA	False	ATTAAA	-15	NA	123887473	123872599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123873960_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ES.27157.58	chr5	-	1249	4	ISM	ENSMUSG00000029422.16	ENSMUST00000182241.2	815	7	1	5267	1	20	5prime_fragment	FALSE	canonical	3	120	junction_1	181.310660347249	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAAATTTGACATTTGA	4324	False	NA	NA	False	NA	NA	NA	123887474	123879991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123880920_123881700_123881742_123883017_123883175_123887351
ES.27157.59	chr5	-	1977	3	FSM	ENSMUSG00000029422.16	ENSMUST00000183253.8	1980	3	-4	7	1	-5	multi-exon	FALSE	canonical	3	434	junction_2	57.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4350	False	NA	NA	False	NA	NA	NA	123887448	123880018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_123881742_123883017_123883175_123887351
ES.27157.6	chr5	-	2451	13	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	221.822564226456	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCATTGTATGCTATTT	4336	False	NA	NA	False	AATAAA	-13	NA	123887462	123866490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123884834_123884934_123887351
ES.27157.60	chr5	-	5673	1	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	-170	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCATAGGAAAGCACTGTA	4324	False	NA	NA	False	NA	NA	NA	123887474	123881801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123881800_123887500
ES.27157.61	chr5	-	1453	1	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	10	-4381	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTATTATTTTCCTTG	4333	False	NA	NA	False	AAAAAG	-10	NA	123887465	123886012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123886000_123887500
ES.27157.7	chr5	-	4915	9	NIC	ENSMUSG00000029422.16	novel	1665	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	434	junction_8	36.0327541967028	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCATTGTATGCTATTT	4355	False	NA	NA	False	AATAAA	-13	NA	123887443	123866490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123881742_123883017_123883175_123887351
ES.27157.8	chr5	-	6788	10	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	72	junction_7	176.343800011424	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4356	False	NA	NA	False	AATAAA	-11	NA	123887442	123866492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123881742_123883017_123883175_123883559
ES.27157.9	chr5	-	3974	10	ISM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	1947	-537	-1855	0	3prime_fragment	FALSE	canonical	3	114	junction_9	127.912103308637	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	6311	False	NA	NA	False	AATAAA	-11	NA	123885487	123866492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559
ES.27158.1	chr5	+	7010	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	-49	0	-39	0	multi-exon	FALSE	canonical	3	266	junction_8	72.5550989140863	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887739	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.10	chr5	+	6947	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	110.416221636605	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123887776	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891890_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919025_123919117_123919208_123919309_123919716_123919854_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.100	chr5	+	6000	44	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-700	0	intron_retention	FALSE	canonical	3	303	junction_31	73.021441245415	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	1018	False	NA	28	True	AATAAA	-20	NA	123910146	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.101	chr5	+	5264	45	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	22358	9	-700	-7	3prime_fragment	FALSE	canonical	3	303	junction_31	75.179355104206	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	1018	False	NA	20	True	AATAAA	-12	NA	123910146	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.102	chr5	+	5230	45	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-658	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	114.319591532967	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	1060	False	NA	21	True	AATAAA	-13	NA	123910188	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914711_123916096_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919854_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.103	chr5	+	5204	44	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	24207	9	1149	-7	3prime_fragment	FALSE	canonical	3	303	junction_30	75.3577298800669	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	2867	False	NA	20	True	AATAAA	-12	NA	123911995	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.104	chr5	+	5097	43	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	25976	1	2918	0	3prime_fragment	FALSE	canonical	3	303	junction_29	74.7670039207366	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	4636	False	NA	28	True	AATAAA	-20	NA	123913764	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.105	chr5	+	6083	38	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-3157	-6	intron_retention	FALSE	canonical	3	303	junction_26	70.1201202487284	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	993	False	NA	21	True	AATAAA	-13	NA	123916093	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.106	chr5	+	7483	36	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-2945	-6	intron_retention	FALSE	canonical	0	0	junction_5	100.685868331324	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	1205	False	NA	21	True	AATAAA	-13	NA	123916305	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919854_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.107	chr5	+	4224	35	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	465	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	105.151744033831	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	4615	False	NA	28	True	AATAAA	-20	NA	123919715	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925119_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.108	chr5	+	3964	34	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	1719	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	129.148280038546	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	5869	False	NA	20	True	AATAAA	-12	NA	123920969	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928952_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940344_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.109	chr5	+	8520	31	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	1731	-6	intron_retention	FALSE	canonical	3	303	junction_19	75.3917251574881	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	5881	False	NA	21	True	AATAAA	-13	NA	123920981	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.11	chr5	+	7082	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	109.363494355782	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887777	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123896754_123896994_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.111	chr5	+	3903	32	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	35682	1	-1804	0	3prime_fragment	FALSE	canonical	3	303	junction_18	76.8229988542862	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	8370	False	NA	28	True	AATAAA	-20	NA	123923470	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.112	chr5	+	3483	26	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	36306	6248	-1180	-6246	internal_fragment	FALSE	canonical	3	303	junction_17	76.002168390119	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTATGTGCTTTAATTC	8994	False	NA	NA	False	AATAAA	-29	NA	123924094	123953408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028
ES.27158.113	chr5	+	4328	32	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-1095	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.283279291309	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	9079	False	NA	22	True	AATAAA	-14	NA	123924179	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123924296_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123933312_123933979_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.115	chr5	+	3456	30	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-243	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	111.192081344072	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	9931	False	NA	22	True	AATAAA	-14	NA	123925031	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935686_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.116	chr5	+	3150	28	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	1873	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.260849979923	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTTTGATGTTGGTTT	NA	False	NA	18	True	AATAAA	-10	NA	123927147	123959645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123927220_123928177_123928203_123928977_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.117	chr5	+	3630	13	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	53732	8	-7935	-6	intron_retention	FALSE	canonical	3	303	junction_1	74.264682424121	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123941520	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058
ES.27158.118	chr5	+	4090	13	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	54760	8	-6907	-6	3prime_fragment	FALSE	canonical	3	444	junction_10	46.5733441883755	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123942548	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.119	chr5	+	4205	3	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-4033	0	intron_retention	FALSE	canonical	3	444	junction_1	52	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123953576	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123956604_123957058_123958024_123959443
ES.27158.12	chr5	+	8010	63	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_48	87.888397683941	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887778	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941372_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.120	chr5	+	3276	1	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-1239	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	527	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123956370	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123956400_123959600
ES.27158.14	chr5	+	6865	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	88.45239670484	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887783	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.15	chr5	+	7403	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	-6	intron_retention	FALSE	canonical	3	266	junction_8	73.0661183332127	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887783	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.16	chr5	+	6994	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	87.50092394142	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTGGTTTCTTGT	NA	False	NA	23	True	AATAAA	-15	NA	123887783	123959650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896471_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.17	chr5	+	6881	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	-5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	88.2547116062797	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887783	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.18	chr5	+	7055	65	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	99.788740470102	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887783	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123925835_123925932_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.19	chr5	+	6837	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	87.8237758738537	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887784	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.2	chr5	+	6870	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	86.4327991685586	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887756	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.21	chr5	+	6029	51	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	-3	17468	-3	13999	5prime_fragment	FALSE	canonical	3	266	junction_8	40.9483821414229	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGTTAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	123887785	123942188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690
ES.27158.23	chr5	+	6663	61	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	100.707739965153	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887788	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.24	chr5	+	6723	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	87.6452025605053	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887788	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924149_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.26	chr5	+	6711	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.751630202458	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887788	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945327_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.28	chr5	+	7530	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_24	97.9574550190993	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916345_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.29	chr5	+	2282	19	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	1	49859	1	-7907	5prime_fragment	FALSE	canonical	3	266	junction_8	36.5391722827859	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGCCCTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	123887789	123909797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150
ES.27158.30	chr5	+	1600	2	FSM	ENSMUSG00000029414.12	ENSMUST00000199838.2	347	2	11	-1264	1	1264	multi-exon	FALSE	canonical	3	399	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAAGGTTACTTAAGG	NA	False	NA	NA	False	NA	NA	NA	123887789	123893387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_123887888_123891885
ES.27158.31	chr5	+	6830	63	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_19	99.3787308935179	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGGTTTCTTGTGTC	NA	False	NA	26	True	AATAAA	-18	NA	123887789	123959653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123912005_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.33	chr5	+	4769	48	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	99.3411250277274	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTGGTTTCTTGT	NA	False	NA	23	True	AATAAA	-15	NA	123887790	123959650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.34	chr5	+	7678	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-7	intron_retention	FALSE	canonical	3	266	junction_8	70.2963050201055	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887790	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.35	chr5	+	2251	20	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	2	48945	2	-6993	5prime_fragment	FALSE	canonical	3	266	junction_8	36.0116940071299	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTAATTTTTATCTAAG	NA	False	NA	NA	False	AATAAA	-20	NA	123887790	123910711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148
ES.27158.36	chr5	+	7077	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_62	85.3528387335125	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887790	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957806_123958024_123959443
ES.27158.37	chr5	+	6923	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_49	100.196836644857	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887790	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941805_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.39	chr5	+	6870	63	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.851469947814	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929112_123929558_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.4	chr5	+	6886	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.9182463417493	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123887767	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887802_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.41	chr5	+	7775	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	intron_retention	FALSE	canonical	3	266	junction_8	70.758861262683	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	NA	False	NA	28	True	AATAAA	-20	NA	123887790	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.42	chr5	+	7285	65	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_63	107.817390061202	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATAGCTTTGATGTTG	NA	False	NA	14	True	AATAAA	-6	NA	123887790	123959641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123926712_123926928_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957806_123958024_123959443
ES.27158.45	chr5	+	6912	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	87.4722919812296	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887790	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907714_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.46	chr5	+	8123	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-7	intron_retention	FALSE	canonical	3	266	junction_8	70.8092509029523	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887790	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.47	chr5	+	6868	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_62	82.7709830795695	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123959443
ES.27158.48	chr5	+	8612	61	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	intron_retention	FALSE	canonical	3	25	junction_2	85.2298118813677	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.49	chr5	+	6893	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_40	87.6348185714554	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932272_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.50	chr5	+	6785	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.281581731567	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887790	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896471_123896585_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.51	chr5	+	8012	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	intron_retention	FALSE	canonical	3	266	junction_8	73.020881722517	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.52	chr5	+	7408	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-1	intron_retention	FALSE	canonical	3	25	junction_2	86.8273763358998	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGGTTTCTTGTGTC	NA	False	NA	26	True	AATAAA	-18	NA	123887790	123959653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.53	chr5	+	6949	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	87.8305791418974	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	NA	False	NA	28	True	AATAAA	-20	NA	123887790	123959655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934677_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.56	chr5	+	1914	19	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	2	50226	2	-8274	5prime_fragment	FALSE	canonical	3	266	junction_8	36.5391722827859	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGCTTACAGGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	123887790	123909430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150
ES.27158.57	chr5	+	7170	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	87.861520373874	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123920063_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.58	chr5	+	6009	55	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	107.494429944699	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887790	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.59	chr5	+	7156	65	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	98.8393385436689	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887790	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123896787_123896994_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.60	chr5	+	7023	65	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	99.3431245556751	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123887790	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123892143_123892218_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.61	chr5	+	6689	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.553893217478	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887790	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123895861_123895978_123896471_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.62	chr5	+	6894	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	87.8905415361016	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGGTTTCTTGTGT	NA	False	NA	25	True	AATAAA	-17	NA	123887790	123959652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925630_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.63	chr5	+	6895	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	88.4102468505715	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.64	chr5	+	7041	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	intron_retention	FALSE	canonical	3	266	junction_8	73.0135191963231	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.65	chr5	+	6812	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	88.0429135739676	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGGTTTCTTGTGTC	NA	False	NA	26	True	AATAAA	-18	NA	123887790	123959653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.66	chr5	+	7043	63	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	99.5703203734506	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTGGTTTCTTGT	NA	False	NA	23	True	AATAAA	-15	NA	123887790	123959650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123920063_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.67	chr5	+	6891	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	87.6350140732001	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123912060_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.68	chr5	+	6924	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.093855369024	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123887790	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892054_123893736_123893844_123895855_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903109_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919718_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947099_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.69	chr5	+	6842	43	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-5	intron_retention	TRUE	canonical	0	0	junction_30	106.794282185345	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887790	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123920014_123920904_123921025_123922243_123922317_123923472_123924753_123948450_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.7	chr5	+	6908	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	87.649528859527	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATGTTGGTTTCTTGT	NA	False	NA	23	True	AATAAA	-15	NA	123887776	123959650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897142_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.70	chr5	+	5774	56	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	92.9132644499363	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887790	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924188_123934587_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.71	chr5	+	6782	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	88.6468160463905	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887790	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.72	chr5	+	7091	65	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_55	97.3976977317098	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887791	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123949690_123949833_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.73	chr5	+	6929	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.4771373744862	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887791	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898753_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.74	chr5	+	6941	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_48	87.7132774876133	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887792	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940492_123941042_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.76	chr5	+	6707	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	99.777519240933	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTTCTTGTGTCA	NA	False	NA	27	True	AATAAA	-19	NA	123887793	123959654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.77	chr5	+	7413	63	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	6	-58	intron_retention	FALSE	canonical	0	0	junction_19	112.082019219222	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACTAACTTGAATGTC	NA	False	NA	-31	True	AATAAA	-18	NA	123887794	123959596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910215_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123920063_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945327_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.79	chr5	+	6602	62	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	6	-55	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	88.9051081084931	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAACTTGAATGTCTCA	NA	False	NA	-28	True	AATAAA	-21	NA	123887794	123959599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.8	chr5	+	6106	56	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	92.8150992275939	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887776	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.81	chr5	+	7857	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	8	-58	intron_retention	FALSE	canonical	0	0	junction_55	123.697130507308	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACTAACTTGAATGTC	NA	False	NA	-31	True	AATAAA	-18	NA	123887796	123959596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123926712_123926928_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123949690_123949833_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.83	chr5	+	7810	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	8	-5	intron_retention	FALSE	canonical	0	0	junction_2	118.243757948472	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTGGTTTCTTG	NA	False	NA	22	True	AATAAA	-14	NA	123887796	123959649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123888683_123888790_123891885_123892061_123893736_123893858_123895861_123895978_123896471_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945327_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.84	chr5	+	8798	61	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	10	-6	intron_retention	FALSE	canonical	3	6	junction_4	83.8073120649717	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	NA	False	NA	21	True	AATAAA	-13	NA	123887798	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896471_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
ES.27158.85	chr5	+	2727	29	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.181809641605	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887798	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123887888_123891882_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.87	chr5	+	4978	47	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	21	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	98.649903206473	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123887809	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.90	chr5	+	6829	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	4204	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_35	99.9569168971098	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123891992	123959656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123926853_123926928_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.92	chr5	+	6583	62	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	6036	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	88.9614358018694	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	3	True	NA	19	True	AATAAA	-11	NA	123893824	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123912005_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.93	chr5	+	6287	58	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	10605	8	10605	-6	3prime_fragment	FALSE	canonical	3	266	junction_2	74.8839709850882	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	4572	False	NA	21	True	AATAAA	-13	NA	123898393	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.94	chr5	+	6137	56	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	12786	8	-10272	-6	3prime_fragment	FALSE	canonical	3	303	junction_42	72.3566465331324	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	6753	False	NA	21	True	AATAAA	-13	NA	123900574	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.95	chr5	+	5942	56	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	-10196	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	89.4664921808187	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGATGTTGGTTTCTT	6829	False	NA	21	True	AATAAA	-13	NA	123900650	123959648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941475_123941706_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.96	chr5	+	5818	52	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	16184	10	-6874	-8	3prime_fragment	FALSE	canonical	3	303	junction_38	72.5925147836495	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTTGATGTTGGTTTC	NA	False	NA	19	True	AATAAA	-11	NA	123903972	123959646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.97	chr5	+	5719	51	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	18043	9	-5015	-7	3prime_fragment	FALSE	canonical	3	303	junction_37	73.2936804915676	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	NA	False	NA	20	True	AATAAA	-12	NA	123905831	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.98	chr5	+	5620	49	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	18558	5	-4500	-3	3prime_fragment	FALSE	canonical	3	303	junction_35	74.271695296541	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGTTGGTTTCTTGTG	NA	False	NA	24	True	AATAAA	-16	NA	123906346	123959651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27158.99	chr5	+	5534	48	ISM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	19885	9	-3173	-7	3prime_fragment	FALSE	canonical	3	303	junction_34	73.847021104645	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTTGATGTTGGTTTCT	46	False	NA	20	True	AATAAA	-12	NA	123907673	123959647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ES.27159.1	chr5	-	2351	1	Antisense	novelGene_ENSMUSG00000029414.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-43	NA	123898984	123896633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_123896600_123899000
ES.2716.1	chr10	-	182	1	Intergenic	novelGene_2071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGAATGTA	9372	False	NA	NA	False	NA	NA	NA	43447172	43446990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43447000_43447200
ES.27160.1	chr5	+	181	1	Intergenic	novelGene_22618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123987721	123987902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_123987700_123987900
ES.27161.1	chr5	+	1730	1	Intergenic	novelGene_22619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124028849	124030579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124028800_124030600
ES.27162.1	chr5	-	173	1	Intergenic	novelGene_22620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGATATATTTG	4431	False	NA	NA	False	NA	NA	NA	124031380	124031207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124031200_124031400
ES.27163.1	chr5	+	202	1	Intergenic	novelGene_22621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAGTTAGAGCA	641	False	NA	NA	False	NA	NA	NA	124033199	124033401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124033200_124033400
ES.27164.1	chr5	+	173	1	Intergenic	novelGene_22622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTAACAAGTGCG	6478	False	NA	NA	False	NA	NA	NA	124042737	124042910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124042700_124042900
ES.27165.1	chr5	+	908	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	17	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	8995	False	NA	8	True	AGTAAA	-15	NA	124045254	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.10	chr5	+	2307	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-11	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	9061	False	NA	NA	False	NA	NA	NA	124045320	124066852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124046446_124046545_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.12	chr5	+	2104	6	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-10	-46	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	613.293600162271	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	9062	False	NA	NA	False	NA	NA	NA	124045321	124066852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124045430_124046162_124046278_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.14	chr5	+	2388	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-8	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTGAAGTTAAAAATG	9064	False	NA	NA	False	NA	NA	NA	124045323	124066875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.15	chr5	+	818	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-6	289	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9066	False	NA	8	True	AGTAAA	-15	NA	124045325	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.16	chr5	+	901	6	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-3	460	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	613.293600162271	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTTTTTTTCTCTTT	9069	False	NA	12	True	AATAAA	-21	NA	124045328	124065656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124045430_124046162_124046278_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.2	chr5	+	2275	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	40	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTGAAGTTAAAAATG	9018	False	NA	NA	False	NA	NA	NA	124045277	124066875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.20	chr5	+	811	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	716.816437838555	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9079	False	NA	8	True	AGTAAA	-15	NA	124045338	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055252_124055348_124060242_124060327_124062793_124062911_124065060_124065205_124065320
ES.27165.21	chr5	+	1169	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	693.029256972899	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGATTTTTTTTTTTCT	9079	False	NA	8	True	AATAAA	-17	NA	124045338	124065652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124046427_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.22	chr5	+	2172	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	-46	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	9079	False	NA	NA	False	NA	NA	NA	124045338	124066852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.25	chr5	+	2715	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	102	-478	2	478	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCATAATCTTGTTTT	9080	False	NA	NA	False	TTTAAA	-17	NA	124045339	124067376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.27	chr5	+	3245	2	FSM	ENSMUSG00000023106.16	ENSMUST00000171639.2	474	2	1	-2772	1	24	multi-exon	FALSE	canonical	3	1559	junction_1	0	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAGACGATTTATATAA	9086	False	NA	NA	False	NA	NA	NA	124045345	124049323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162
ES.27165.28	chr5	+	2125	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	-46	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_6	549.294724057633	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	9086	False	NA	NA	False	NA	NA	NA	124045345	124066852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065120_124065201_124065312
ES.27165.29	chr5	+	814	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	572.327630528762	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9086	False	NA	8	True	AGTAAA	-15	NA	124045345	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046272_124055240_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.3	chr5	+	1027	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-23	462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTTCTCTTTTT	9049	False	NA	14	True	AATAAA	-23	NA	124045308	124065658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.30	chr5	+	976	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	1	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9086	False	NA	8	True	AGTAAA	-15	NA	124045345	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.31	chr5	+	3134	3	FSM	ENSMUSG00000023106.16	ENSMUST00000168899.2	338	3	15	-2811	2	83	multi-exon	FALSE	canonical	3	41	junction_2	759	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAACGTTTTTCAGAC	9087	False	NA	NA	False	AATAAA	-10	NA	124045346	124049382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162_124046278_124046446
ES.27165.33	chr5	+	696	6	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	5	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	755.62281596045	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCGGCGTCCTCACTGT	9090	False	NA	8	True	AGTAAA	-15	NA	124045349	124065485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124065060_124065201_124065312
ES.27165.34	chr5	+	2677	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	12	477	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTCATAATCTTGTTT	9097	False	NA	NA	False	TTTAAA	-16	NA	124045356	124067375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.35	chr5	+	1996	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	15	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGATGTGAAGTTAAG	9100	False	NA	NA	False	AATAAA	-7	NA	124045359	124066678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.37	chr5	+	3956	1	FSM	ENSMUSG00000023106.16	ENSMUST00000198321.2	3962	1	30	-24	23	24	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAGACGATTTATATAA	9108	False	NA	NA	False	NA	NA	NA	124045367	124049323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045400_124049300
ES.27165.38	chr5	+	1708	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	37	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	572.327630528762	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCATTTTAATGAATCGG	9122	False	NA	NA	False	ATTAAA	-18	NA	124045381	124066412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.39	chr5	+	931	7	Fusion	ENSMUSG00000023106.16_ENSMUSG00000105875.2	novel	771	7	NA	NA	19	292	multi-exon	FALSE	non_canonical	0	0	junction_2	719.364225471971	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCGTCCTCACTGTTCC	9311	False	NA	11	True	AGTAAA	-18	NA	124045570	124065488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_124045766_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.40	chr5	+	5292	5	NNC	ENSMUSG00000105875.2	novel	650	4	NA	NA	-18407	-9576	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	668.668593176022	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGTGAAGTTAAAAATG	NA	False	NA	NA	False	NA	NA	NA	124047073	124066875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124050103_124059883_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.41	chr5	+	878	6	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	7923	1247	7609	455	3prime_fragment	FALSE	canonical	3	1477	junction_2	112.177359569567	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGATTTTTTTTTTTC	NA	False	NA	7	True	AATAAA	-16	NA	124053160	124065651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.42	chr5	+	1554	1	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	19759	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAATAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	124065310	124066864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124065300_124066900
ES.27165.5	chr5	+	2249	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	75	15	-19	-15	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAAAAATGAAATTCTT	9053	False	NA	NA	False	NA	NA	NA	124045312	124066883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.6	chr5	+	1182	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-19	462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	684.091353250307	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTTCTCTTTTT	9053	False	NA	14	True	AATAAA	-23	NA	124045312	124065658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124055243_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.7	chr5	+	958	7	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	-14	462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	718.31502296849	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTTCTCTTTTT	9058	False	NA	14	True	AATAAA	-23	NA	124045317	124065658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124045430_124046162_124046278_124055243_124055348_124060242_124060327_124062793_124062911_124065120_124065201_124065312
ES.27165.8	chr5	+	846	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	83	1410	-11	292	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGCGTCCTCACTGTTCC	9061	False	NA	11	True	AGTAAA	-18	NA	124045320	124065488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27165.9	chr5	+	1018	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	83	1238	-11	464	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCTCTTTTTTA	9061	False	NA	16	True	AATAAA	-25	NA	124045320	124065660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ES.27166.1	chr5	-	3406	2	Antisense	novelGene_ENSMUSG00000023106.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGCGCGCTCGCGCGA	2747	False	NA	NA	False	NA	NA	NA	124049473	124045334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_124045429_124046161
ES.27167.1	chr5	-	183	1	Intergenic	novelGene_22623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAT	NA	False	NA	NA	False	NA	NA	NA	124055804	124055621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124055600_124055800
ES.27168.1	chr5	+	2615	10	NIC	ENSMUSG00000061882.13	novel	3920	13	NA	NA	23	-962	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.21262939884466	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACATAACTAAAACAAAGG	NA	False	NA	NA	False	AATAAA	-28	NA	124068774	124106996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124068924_124072134_124072328_124074451_124074619_124082196_124082369_124089261_124089351_124092119_124092843_124095456_124095566_124099284_124099402_124104898_124104992_124106193
ES.27168.2	chr5	+	5571	3	ISM	ENSMUSG00000105875.2	ENSMUST00000166129.5	650	4	6322	-4640	6322	4640	3prime_fragment	FALSE	canonical	2	2	junction_2	3	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGATCAAAGCTCAAATT	1148	False	NA	NA	False	NA	NA	NA	124071802	124081091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124072328_124074451_124074619_124076212
ES.27168.3	chr5	+	2432	3	NNC	ENSMUSG00000061882.13	novel	622	3	NA	NA	3067	-340	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTATTTCATAATCC	1164	False	NA	NA	False	AGTAAA	-21	NA	124071818	124074368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124072795_124072863_124073113_124073161
ES.27168.4	chr5	+	3789	1	Intergenic	novelGene_22625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGCTCACTGCACAAT	1393	False	NA	NA	False	NA	NA	NA	124078311	124082100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124078300_124082100
ES.27169.1	chr5	-	175	1	Intergenic	novelGene_22624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTTAAACTCCTT	8460	False	NA	NA	False	NA	NA	NA	124075015	124074840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124074800_124075000
ES.2717.1	chr10	+	1816	2	NIC	ENSMUSG00000047139.10	novel	574	2	NA	NA	367	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGTCTGTTGAATTTA	NA	False	NA	9	True	AATAAA	-18	NA	43454646	43460260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43454802_43458599
ES.2717.2	chr10	+	1889	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-72	-1	-72	1	multi-exon	FALSE	canonical	3	74	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCTGTTGAATTTATT	NA	False	NA	11	True	AATAAA	-20	NA	43455092	43460262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43455319_43458599
ES.27170.1	chr5	-	177	1	Intergenic	novelGene_22626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTTAATTCCAAA	9553	False	NA	NA	False	NA	NA	NA	124086231	124086054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124086100_124086200
ES.27171.1	chr5	-	1996	1	Antisense	novelGene_ENSMUSG00000061882.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGCCATAATTAGCAGG	NA	False	NA	NA	False	NA	NA	NA	124100892	124098896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_124098900_124100900
ES.27172.1	chr5	+	4357	32	NNC	ENSMUSG00000000915.16	novel	817	9	NA	NA	-633	1522	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.3555923753462	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTCTGCCAGAC	NA	False	NA	13	True	AATAAA	-27	NA	124111057	124141273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111256_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.10	chr5	+	4121	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	31	2583	31	1287	multi-exon	FALSE	canonical	3	34	junction_6	6.64046185222248	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGGAGTGGCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	124111721	124141038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.13	chr5	+	4525	31	NIC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	67	1522	intron_retention	FALSE	canonical	3	34	junction_6	6.68696908588305	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTCTGCCAGAC	NA	False	NA	13	True	AATAAA	-27	NA	124111757	124141273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.14	chr5	+	4304	32	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	96	1511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.3011875092096	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124111786	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129476_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.16	chr5	+	5087	30	NIC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	96	1514	intron_retention	FALSE	canonical	3	34	junction_6	6.52098050008745	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCTAGTGAGGGCCTC	NA	False	NA	5	True	AATAAA	-19	NA	124111786	124141265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135544_124135613_124135716_124135920_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.17	chr5	+	4462	30	NIC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	118	1510	intron_retention	FALSE	canonical	3	34	junction_6	6.70776078112432	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTGCCCTAGTGAGGG	NA	False	NA	1	True	AATAAA	-15	NA	124111808	124141261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134435_124134582_124134645_124134833_124134907_124134993_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.18	chr5	+	4260	28	NIC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-5214	1511	intron_retention	FALSE	canonical	3	34	junction_4	6.68167035948848	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124127653	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.19	chr5	+	4196	29	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-5214	1522	intron_retention	FALSE	canonical	2	4	junction_25	10.1905318200529	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTCTGCCAGAC	NA	False	NA	13	True	AATAAA	-27	NA	124127653	124141273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139405_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.2	chr5	+	4424	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	-34	2345	-34	1525	multi-exon	FALSE	canonical	3	34	junction_6	6.64046185222248	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCCTCTGCCAGACTCT	NA	False	NA	16	True	AATAAA	-30	NA	124111656	124141276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.20	chr5	+	3115	19	ISM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	23301	2359	2124	1511	3prime_fragment	FALSE	canonical	3	35	junction_3	7.00176344630584	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124134991	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.21	chr5	+	3682	11	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-1829	1511	intron_retention	FALSE	canonical	2	4	junction_8	14.2337626789265	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124135643	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124135716_124135920_124136116_124136848_124136997_124137104_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124139405_124139487_124139612_124139693_124140058_124140180
ES.27172.22	chr5	+	1949	10	ISM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	26509	2359	-246	1511	3prime_fragment	FALSE	canonical	3	42	junction_8	5.76922443810985	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124138199	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.3	chr5	+	4476	31	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-14	1511	intron_retention	FALSE	canonical	0	0	junction_12	10.5115809150352	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124111676	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134818_124134907_124134993_124135178_124135266_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.4	chr5	+	5447	26	NIC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-12	1522	intron_retention	FALSE	canonical	3	34	junction_6	5.7335503834884	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTCTGCCAGAC	NA	False	NA	13	True	AATAAA	-27	NA	124111678	124141273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135356_124135426_124136116_124136848_124136997_124137104_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.5	chr5	+	4379	32	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-10	1511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	10.0293015039757	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124111680	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138831_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.7	chr5	+	4409	32	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	-3	1511	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_28	9.83315549202193	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCCCTAGTGAGGGC	NA	False	NA	2	True	AATAAA	-16	NA	124111687	124141262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139405_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.8	chr5	+	4403	32	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	14	1522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	12.452281446201	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTCTGCCAGAC	NA	False	NA	13	True	AATAAA	-27	NA	124111704	124141273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135250_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139170_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27172.9	chr5	+	4405	32	NNC	ENSMUSG00000000915.16	novel	6735	32	NA	NA	15	1510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.3624231092496	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTGCCCTAGTGAGGG	NA	False	NA	1	True	AATAAA	-15	NA	124111705	124141261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134788_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ES.27173.1	chr5	-	4296	2	ISM	ENSMUSG00000066278.7	ENSMUST00000199306.2	922	4	1907	-1495	1907	0	3prime_fragment	FALSE	canonical	3	157	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	4966	False	NA	-1	True	AATAAA	-20	NA	124147869	124142703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124144802_124145671
ES.27173.2	chr5	-	2544	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	-23	1	-23	-1	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTTTCTCTCA	2213	False	NA	-2	True	AATAAA	-19	NA	124170356	124142704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ES.27173.3	chr5	-	2551	5	NNC	ENSMUSG00000066278.7	novel	2522	4	NA	NA	41	-1	intron_retention	FALSE	canonical	0	0	junction_3	77.7572343901196	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTTTCTCTCA	2289	False	NA	-2	True	AATAAA	-19	NA	124170280	124142704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124144802_124145671_124145755_124148750_124148923_124165945_124166029_124170164
ES.27173.4	chr5	-	2011	2	NNC	ENSMUSG00000066278.7	novel	2522	4	NA	NA	18	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTTTCTCTCA	2266	False	NA	-2	True	AATAAA	-19	NA	124170303	124142704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124144577_124170164
ES.27173.5	chr5	-	2489	4	NNC	ENSMUSG00000066278.7	novel	2522	4	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_3	73.3136337176714	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTTTCTCTCA	2250	False	NA	-2	True	AATAAA	-19	NA	124170319	124142704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124144802_124145671_124145755_124148750_124148923_124170182
ES.27174.1	chr5	-	153	1	Intergenic	novelGene_22627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACAATAAATAATAAT	10027	False	NA	NA	False	NA	NA	NA	124177160	124177007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124177000_124177200
ES.27175.1	chr5	+	210	1	Intergenic	novelGene_22628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTCACTACCTCCC	22	False	NA	NA	False	NA	NA	NA	124187156	124187366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124187200_124187400
ES.27176.1	chr5	-	230	1	Intergenic	novelGene_22629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAAAATGTTTT	8521	False	NA	NA	False	TTTAAA	-32	NA	124195715	124195485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124195500_124195700
ES.27177.1	chr5	-	3299	12	NNC	ENSMUSG00000029408.14	novel	3661	12	NA	NA	17	-335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.42004539561939	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCCGGTCATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124233832	124199927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124200987_124209773_124209911_124211656_124211817_124214084_124214261_124215182_124215372_124216847_124216977_124218095_124218294_124220002_124220209_124221114_124221246_124221668_124221784_124227650_124228326_124233708
ES.27178.1	chr5	-	6178	1	Intergenic	novelGene_22630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	1132	False	NA	NA	False	NA	NA	NA	124248787	124242609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124242600_124248800
ES.27179.1	chr5	+	1521	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	-324	399	-324	-1	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTTTGGGTCATTCTT	NA	False	NA	24	True	AATAAA	-39	NA	124250035	124253147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ES.27179.2	chr5	+	1379	6	FSM	ENSMUSG00000023707.14	ENSMUST00000198770.2	818	6	-455	-106	-321	-12	multi-exon	FALSE	canonical	3	23	junction_4	30.8506077735918	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACACGCAGACTTTT	NA	False	NA	13	True	AATAAA	-28	NA	124250038	124253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252450_124252709_124252777
ES.27179.3	chr5	+	2038	6	NIC	ENSMUSG00000023707.14	novel	1596	7	NA	NA	-71	-1	intron_retention	FALSE	canonical	3	59	junction_4	16.2308348522188	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	11	True	TATAAA	-16	NA	124250288	124253545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124250530_124250851_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ES.27179.4	chr5	+	1468	6	FSM	ENSMUSG00000023707.14	ENSMUST00000198770.2	818	6	-134	-516	0	0	multi-exon	FALSE	canonical	3	23	junction_4	30.8506077735918	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGCTATTATTTAA	NA	False	NA	12	True	TATAAA	-17	NA	124250359	124253546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252450_124252709_124252777
ES.27179.5	chr5	+	1587	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	8	1	8	-1	multi-exon	FALSE	canonical	3	59	junction_5	17.423642940939	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTTGCTATTATTTA	NA	False	NA	11	True	TATAAA	-16	NA	124250367	124253545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ES.27179.6	chr5	+	1812	5	NIC	ENSMUSG00000023707.14	novel	818	6	NA	NA	0	3	intron_retention	FALSE	canonical	3	23	junction_3	31.4841229828623	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCTGTTTGCTATTAT	NA	False	NA	8	True	TATAAA	-13	NA	124250383	124253542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124250530_124250851_124251395_124251491_124251592_124252450_124252709_124252777
ES.27179.7	chr5	+	1571	7	NNC	ENSMUSG00000023707.14	novel	1474	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.9434382518318	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCCTCTGTTTGCTAT	NA	False	NA	5	True	TATAAA	-10	NA	124250384	124253539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252029_124252256_124252541_124252709_124252777
ES.27179.8	chr5	+	1425	5	FSM	ENSMUSG00000023707.14	ENSMUST00000131094.8	708	5	-18	-699	1	-12	multi-exon	FALSE	canonical	3	73	junction_4	13.2759180473518	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACACGCAGACTTTT	NA	False	NA	13	True	AATAAA	-28	NA	124250384	124253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127
ES.27179.9	chr5	+	2735	3	NIC	ENSMUSG00000023707.14	novel	1474	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	94	junction_1	5.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCCTCTGTTTGCTAT	NA	False	NA	5	True	TATAAA	-10	NA	124250385	124253539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124250530_124250851_124251395_124251491
ES.2718.1	chr10	-	164	1	Intergenic	novelGene_2072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	43460461	43460297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43460300_43460500
ES.27180.1	chr5	+	1218	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-27	1	-17	-1	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254134	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ES.27180.10	chr5	+	1718	2	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	22	junction_1	0	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254176	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124254675_124255038
ES.27180.11	chr5	+	1556	3	NIC	ENSMUSG00000029404.16	novel	753	4	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	598	junction_2	13	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254176	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124255452_124255892_124255963_124256047
ES.27180.12	chr5	+	1996	2	ISM	ENSMUSG00000029404.16	ENSMUST00000145667.2	753	4	-556	-161	1	-1	intron_retention	FALSE	canonical	3	617	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254185	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124255257_124255333
ES.27180.13	chr5	+	939	5	FSM	ENSMUSG00000029404.16	ENSMUST00000122394.8	982	5	142	-99	142	-1	multi-exon	FALSE	canonical	3	15	junction_1	259.116286635943	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254326	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124254588_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ES.27180.2	chr5	+	1023	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254140	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ES.27180.3	chr5	+	1295	4	ISM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	-19	1	-9	-1	intron_retention	FALSE	canonical	3	507	junction_1	53.5806764504601	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254142	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892
ES.27180.4	chr5	+	1673	2	ISM	ENSMUSG00000029404.16	ENSMUST00000196401.2	294	3	-1231	-2	-9	2	intron_retention	FALSE	canonical	3	624	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTGTTGTGTTGCA	NA	False	NA	21	True	ATTAAA	-14	NA	124254142	124256256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124255452_124255892
ES.27180.5	chr5	+	1649	4	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-9	2	intron_retention	FALSE	canonical	3	507	junction_1	48.0069439421701	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTGTTGTGTTGCA	NA	False	NA	21	True	ATTAAA	-14	NA	124254142	124256256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124254675_124254977_124255257_124255333_124255963_124256047
ES.27180.6	chr5	+	1147	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	-9	2	intron_retention	FALSE	canonical	3	22	junction_1	256.087265399902	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTCCTGTTGTGTTGCA	NA	False	NA	21	True	ATTAAA	-14	NA	124254142	124256256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124254675_124255038_124255257_124255333_124255452_124255892_124255963_124256047
ES.27180.7	chr5	+	2103	1	Genic_Genomic	ENSMUSG00000029404.16	novel	NA	NA	NA	NA	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCCTGTTGTGTTGCAT	NA	False	NA	22	True	ATTAAA	-15	NA	124254154	124256257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_124254200_124256300
ES.27180.8	chr5	+	1491	4	FSM	ENSMUSG00000029404.16	ENSMUST00000145667.2	753	4	-577	-161	3	-1	multi-exon	FALSE	canonical	3	598	junction_3	10.9848380355227	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254164	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124255257_124255333_124255452_124255892_124255963_124256047
ES.27180.9	chr5	+	1350	3	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	3	-1	intron_retention	FALSE	canonical	3	507	junction_1	58.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGTGTTGCATT	NA	False	NA	23	True	ATTAAA	-16	NA	124254164	124256258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124254675_124254977_124255452_124255892
ES.27181.1	chr5	+	183	1	Intergenic	novelGene_22633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	124347152	124347335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124347200_124347300
ES.27181.2	chr5	+	405	1	Intergenic	novelGene_22634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTAAAAGAACACCTGT	NA	False	NA	NA	False	NA	NA	NA	124347152	124347557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124347200_124347600
ES.27182.1	chr5	-	6519	24	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-91	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	8.98665256842798	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8436	False	NA	-11	True	ATTAAA	-16	NA	124387605	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124290606_124290783_124354378_124354481_124387490
ES.27182.10	chr5	-	5469	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	-95	1578	-95	26	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCAGCGCAGCCTG	8123	False	NA	NA	False	TTTAAA	-32	NA	124387918	124258330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.11	chr5	-	4349	11	NIC	ENSMUSG00000029406.16	novel	5866	25	NA	NA	-2842	24	intron_retention	FALSE	canonical	3	20	junction_7	4.44522215417857	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGTGTCAGCGCAGCC	NA	False	NA	NA	False	TTTAAA	-30	NA	124267537	124258332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124263527_124265239_124265411_124266665_124266845_124267226
ES.27182.12	chr5	-	5615	26	NIC	ENSMUSG00000029406.16	novel	6792	26	NA	NA	-81	24	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	8.21179639299465	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGTGTCAGCGCAGCC	8137	False	NA	NA	False	TTTAAA	-30	NA	124387904	124258332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.13	chr5	-	5987	24	NIC	ENSMUSG00000029406.16	novel	5866	25	NA	NA	-82	2	intron_retention	FALSE	canonical	0	0	junction_23	9.6182325286627	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGGCTGCTTCCTTTTC	8445	False	NA	NA	False	TTTAAA	-8	NA	124387596	124258354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124387490
ES.27182.14	chr5	-	6798	23	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-224	2	intron_retention	FALSE	canonical	0	0	junction_21	9.52823121479767	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGGCTGCTTCCTTTTC	7994	False	NA	NA	False	TTTAAA	-8	NA	124388047	124258354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124268390_124268533_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124354378_124354481_124387490
ES.27182.15	chr5	-	7084	24	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-58	2	intron_retention	FALSE	canonical	3	7	junction_8	7.49189858603548	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGGCTGCTTCCTTTTC	8160	False	NA	NA	False	TTTAAA	-8	NA	124387881	124258354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.16	chr5	-	5436	25	NNC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	8.84109328960822	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCGGCTGCTTCCTTTT	8172	False	NA	NA	False	TTTAAA	-7	NA	124387869	124258355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281752_124290606_124290783_124354378_124354481_124387490
ES.27182.17	chr5	-	5598	26	NNC	ENSMUSG00000029406.16	novel	6792	26	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	9.11701705603318	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTCGGCTGCTTCCTT	8170	False	NA	NA	False	TTTAAA	-5	NA	124387871	124258357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281752_124290606_124290783_124354378_124354481_124387490
ES.27182.19	chr5	-	6219	24	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-69	-2	intron_retention	FALSE	canonical	3	6	junction_8	7.61577310586391	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCTTCGGCTGCTTCCT	8149	False	NA	NA	False	TTTAAA	-4	NA	124387892	124258358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.2	chr5	-	7007	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	-55	0	-55	0	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8163	False	NA	-11	True	ATTAAA	-16	NA	124387878	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.20	chr5	-	5461	26	NNC	ENSMUSG00000029406.16	novel	6792	26	NA	NA	-48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.4651803615609	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCTTCGGCTGCTTCCT	8170	False	NA	NA	False	TTTAAA	-4	NA	124387871	124258358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262915_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267426_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.21	chr5	-	3916	15	ISM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	-34	8755	-34	-2228	5prime_fragment	FALSE	canonical	3	18	junction_2	7.30145358745749	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCCCAAATTGATGAAAA	8184	False	NA	NA	False	AATAAA	-17	NA	124387857	124265507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.23	chr5	-	1733	10	NIC	ENSMUSG00000029406.16	novel	1690	10	NA	NA	-11	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	12.8754719438853	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGTCCGCTTCAGGG	4694	False	NA	NA	False	AATAAA	-14	NA	124325256	124270873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124271039_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124325001
ES.27182.24	chr5	-	1925	11	NIC	ENSMUSG00000029406.16	novel	1690	10	NA	NA	-12	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.73447481891037	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGTCCGCTTCAGGG	8206	False	NA	NA	False	AATAAA	-14	NA	124387835	124270873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124271039_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.25	chr5	-	340	1	Intergenic	novelGene_22631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	124314132	124313792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124313800_124314100
ES.27182.26	chr5	-	231	1	Intergenic	novelGene_22632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	124314132	124313901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124313900_124314100
ES.27182.3	chr5	-	7625	26	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-511	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	8.21179639299465	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	7707	False	NA	-11	True	ATTAAA	-16	NA	124388334	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ES.27182.4	chr5	-	6468	22	NIC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	9.00062985954209	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8137	False	NA	-11	True	ATTAAA	-16	NA	124387904	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124290606_124290783_124354378_124354481_124387490
ES.27182.5	chr5	-	7427	27	NNC	ENSMUSG00000029406.16	novel	6952	25	NA	NA	-55	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_25	10.656553391107	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	8163	False	NA	-11	True	ATTAAA	-16	NA	124387878	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124322995_124323254_124354378_124354481_124387490
ES.27182.6	chr5	-	4955	15	NNC	ENSMUSG00000029406.16	novel	6620	24	NA	NA	-4501	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	9.89047160510704	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	NA	False	NA	-11	True	ATTAAA	-16	NA	124269196	124256752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267426_124268269_124268390_124268533_124268724_124269157
ES.27182.7	chr5	-	7152	26	NNC	ENSMUSG00000029406.16	novel	6792	26	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	10.6076199026926	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCGTCTCATTACTG	8135	False	NA	-13	True	ATTAAA	-14	NA	124387906	124256754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124292304_124292424_124354378_124354481_124387490
ES.27182.8	chr5	-	6933	25	FSM	ENSMUSG00000029406.16	ENSMUST00000161938.8	5866	25	-13	-1054	-13	-2	multi-exon	FALSE	canonical	0	0	junction_24	9.53356643071673	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTCGTCTCATTACT	4692	False	NA	-14	True	ATTAAA	-13	NA	124325258	124256755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124325001
ES.27182.9	chr5	-	2579	6	ISM	ENSMUSG00000029406.16	ENSMUST00000159628.8	2755	8	1412	-656	-1042	109	3prime_fragment	FALSE	canonical	3	25	junction_1	4.07921561087423	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCCATGGAACTGTCA	2198	False	NA	NA	False	TATAAA	-22	NA	124261205	124257700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187
ES.27183.1	chr5	+	173	1	Intergenic	novelGene_22637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124418852	124419025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124418900_124419000
ES.27184.1	chr5	+	4351	2	Antisense	novelGene_ENSMUSG00000038126.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGTGAGATGGCTCAGC	1259	False	NA	NA	False	NA	NA	NA	124452578	124461877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124453960_124458907
ES.27184.2	chr5	+	6822	3	Antisense	novelGene_ENSMUSG00000038126.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCGCCCGGCGCCTCAG	1260	False	NA	NA	False	NA	NA	NA	124452579	124465924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124459064_124462938_124463201_124465848
ES.27184.3	chr5	+	5531	2	Antisense	novelGene_ENSMUSG00000038126.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAGGCCATACAAAGA	1260	False	NA	NA	False	NA	NA	NA	124452579	124458295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124453960_124454144
ES.27184.4	chr5	+	173	1	Intergenic	novelGene_22638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGCACCTGGA	1413	False	NA	NA	False	NA	NA	NA	124452732	124452905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124452700_124452900
ES.27185.1	chr5	-	7721	22	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.6624946941496	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTGGTATCTGTGAGCT	NA	False	NA	-3	True	NA	NA	NA	124465924	124389020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398233_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435919_124436680_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.10	chr5	-	7465	23	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.0524833992778	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465933	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398233_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429123_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453805_124453881_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.11	chr5	-	7637	22	NNC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.4174874918701	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCGTGGTATCTGTGAG	NA	False	NA	-5	True	NA	NA	NA	124465933	124389022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424481_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124458907_124459062_124462936_124463201_124465848
ES.27185.12	chr5	-	7605	22	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	11.9068569585086	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCGTGGTATCTGTGA	NA	False	NA	-6	True	NA	NA	NA	124463204	124389023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450888_124453431_124453960_124454144_124454235_124458907_124459018_124462936
ES.27185.13	chr5	-	7771	23	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.9210435867953	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCGTGGTATCTGTGA	NA	False	NA	-6	True	NA	NA	NA	124465915	124389023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405084_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435924_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.14	chr5	-	9214	21	NIC	ENSMUSG00000038126.18	novel	5008	23	NA	NA	-40	-3	intron_retention	FALSE	canonical	1	1	junction_3	11.8839177041917	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTCGTGGTATCTGTG	NA	False	NA	-7	True	NA	NA	NA	124465973	124389024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124393182_124397008_124397078_124398030_124398279_124399984_124400106_124400951_124401099_124403379_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.15	chr5	-	9208	22	NNC	ENSMUSG00000038126.18	novel	5008	23	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1	junction_13	11.6065506564435	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTCGTGGTATCTGTG	NA	False	NA	-7	True	NA	NA	NA	124465933	124389024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.16	chr5	-	6438	10	NNC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	16.7516352619861	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTCGTGGTATCTGT	NA	False	NA	-8	True	NA	NA	NA	124465933	124389025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124404486_124458920_124459062_124462936_124463201_124465848
ES.27185.18	chr5	-	7408	20	NNC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3582639271053	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTCGTGGTATCTGT	NA	False	NA	-8	True	NA	NA	NA	124465934	124389025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393179_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124445015_124445110_124453435_124453960_124458907_124459062_124462936_124463201_124465848
ES.27185.19	chr5	-	7567	23	NNC	ENSMUSG00000038126.18	novel	5008	23	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.3679391500295	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTCGTGGTATCTGT	NA	False	NA	-8	True	NA	NA	NA	124465882	124389025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398233_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.2	chr5	-	9159	22	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	8	0	intron_retention	FALSE	canonical	1	1	junction_13	10.8259786651811	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465925	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.20	chr5	-	4124	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-107	1942	16	6	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAGACTGACATGCTA	NA	False	NA	NA	False	AATAAA	-18	NA	124466019	124392674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.21	chr5	-	3926	23	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.8436061867761	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAGACTGACATGCTA	NA	False	NA	NA	False	AATAAA	-18	NA	124465934	124392674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398233_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.22	chr5	-	4032	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	32	944	29	6	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATAGACTGACATGCTA	NA	False	NA	NA	False	AATAAA	-18	NA	124465883	124392674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.24	chr5	-	5537	22	NNC	ENSMUSG00000038126.18	novel	5008	23	NA	NA	1	4	intron_retention	FALSE	canonical	1	1	junction_13	11.6065506564435	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATAGACTGACATGC	NA	False	NA	NA	False	AATAAA	-16	NA	124465914	124392676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.25	chr5	-	3912	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-16	1112	2	-162	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCTCCAATTTCTATC	NA	False	NA	NA	False	AAAAAG	-18	NA	124465931	124392842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.26	chr5	-	3932	25	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	-18	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	16.2864441757214	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATATGTCTCCAATTTC	NA	False	NA	NA	False	AAAAAG	-14	NA	124465951	124392846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124417308_124417434_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453805_124453881_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.27	chr5	-	5367	21	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	67	-169	intron_retention	FALSE	canonical	1	1	junction_13	12.1082616423663	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCATATGTCTCCAAT	NA	False	NA	NA	False	AAAAAG	-11	NA	124463123	124392849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436751_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936
ES.27185.28	chr5	-	3910	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-68	2117	-47	-169	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCATATGTCTCCAAT	NA	False	NA	NA	False	AAAAAG	-11	NA	124465980	124392849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.29	chr5	-	3781	22	FSM	ENSMUSG00000038126.18	ENSMUST00000031344.13	7747	22	138	3828	15	-169	multi-exon	FALSE	canonical	3	11	junction_19	11.2106201672855	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCATATGTCTCCAAT	NA	False	NA	NA	False	AAAAAG	-11	NA	124465897	124392849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124458907_124459062_124462936_124463201_124465848
ES.27185.3	chr5	-	7782	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-112	-1711	11	0	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124466024	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.30	chr5	-	3740	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-42	2261	-21	-313	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGCCTTCAGACGGTA	NA	False	NA	NA	False	NA	NA	NA	124465954	124392993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.31	chr5	-	3483	21	NIC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	-12	-361	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	12.0896650077659	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGTAACAATTATGCAC	NA	False	NA	NA	False	ATTAAA	-22	NA	124465945	124393041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124462936_124463201_124465848
ES.27185.32	chr5	-	4086	23	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	363	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	11.738190830232	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTAATGTAACAATTATG	NA	False	NA	NA	False	ATTAAA	-19	NA	124465549	124393044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465046
ES.27185.33	chr5	-	3131	16	NNC	ENSMUSG00000038126.18	novel	2071	11	NA	NA	3	-9319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0367003323523	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATAGAATTTTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	124465930	124409326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124409886_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.34	chr5	-	1254	1	Intergenic	novelGene_22635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGTTTGATAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	124414840	124413586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124413600_124414800
ES.27185.35	chr5	-	119	1	Intergenic	novelGene_22636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGAGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	124414910	124414791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124414800_124414900
ES.27185.36	chr5	-	1289	5	ISM	ENSMUSG00000038126.18	ENSMUST00000141203.8	1778	7	9353	3	9353	-3	3prime_fragment	FALSE	canonical	3	36	junction_4	3.76662979332984	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATAGAACTAATGTC	NA	False	NA	NA	False	TATAAA	-11	NA	124453837	124436580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435
ES.27185.37	chr5	-	5191	6	ISM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-9	55081	9	6440	5prime_fragment	FALSE	canonical	3	20	junction_4	11.916375287813	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTGTCATACATCTCT	NA	False	NA	NA	False	NA	NA	NA	124465924	124446811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.38	chr5	-	1183	6	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	1	4	intron_retention	FALSE	canonical	1	2	junction_1	18.7573985403094	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTCTTCCCATGT	NA	False	NA	NA	False	AATAAA	-20	NA	124465932	124453247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124453805_124453881_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.39	chr5	-	1175	6	NIC	ENSMUSG00000038126.18	novel	1197	6	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.4935886896179	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTCTTCCCATGT	NA	False	NA	NA	False	AATAAA	-20	NA	124465933	124453247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124453350_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.4	chr5	-	7472	23	NNC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.5430138130512	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465914	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403571_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453805_124453881_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ES.27185.40	chr5	-	1289	5	ISM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-10	61525	8	-4	5prime_fragment	FALSE	canonical	3	20	junction_3	13.026415470113	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAATGACTCCTGACTCT	NA	False	NA	NA	False	AATAAA	-12	NA	124465925	124453255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.5	chr5	-	7592	22	NIC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_19	10.3378309281648	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465924	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124458907_124459018_124462936_124463201_124465848
ES.27185.6	chr5	-	7582	22	NIC	ENSMUSG00000038126.18	novel	5959	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_20	11.4662078693217	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465934	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124462936_124463201_124465848
ES.27185.7	chr5	-	7774	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-57	-2709	-39	0	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465972	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ES.27185.8	chr5	-	7530	23	NNC	ENSMUSG00000038126.18	novel	7747	22	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.3356452515695	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465941	124389021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124393182_124397008_124397078_124398030_124398233_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453805_124453881_124453960_124458907_124459062_124462936_124463201_124465848
ES.27186.1	chr5	+	1696	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	-8	-11	1	11	multi-exon	FALSE	canonical	3	74	junction_1	7.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTGGTGTCACAGTGA	5390	False	NA	28	True	NA	NA	NA	124466152	124479918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124466293_124476689_124476999_124478671
ES.27187.1	chr5	+	177	1	Intergenic	novelGene_22639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAT	2306	False	NA	NA	False	NA	NA	NA	124485878	124486055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124485900_124486100
ES.27188.1	chr5	+	5687	1	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9937	False	NA	NA	False	NA	NA	NA	124507057	124512744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124507100_124512700
ES.27188.2	chr5	+	3102	1	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGAAGGAGAGGATTGG	NA	False	NA	NA	False	NA	NA	NA	124508264	124511366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124508300_124511400
ES.27189.1	chr5	+	2257	4	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	124516553	124523146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124516603_124517340_124517486_124519571_124521552_124523063
ES.27189.2	chr5	+	2885	15	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124516553	124535142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124516603_124517340_124517486_124519571_124519667_124519746_124519847_124519925_124520069_124522529_124522607_124524894_124524995_124525383_124525453_124525538_124525655_124526588_124526726_124529986_124530122_124530641_124530813_124530901_124531070_124531863_124532055_124533953
ES.27189.3	chr5	+	3689	4	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	124516553	124523146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124516603_124517340_124517486_124519571_124519667_124519746
ES.27189.4	chr5	+	1063	2	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124522457	124524998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124523141_124524618
ES.27189.5	chr5	+	4838	1	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7661	False	NA	NA	False	NA	NA	NA	124530304	124535142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124530300_124535100
ES.2719.1	chr10	+	2473	2	NNC	ENSMUSG00000075184.4	novel	1836	3	NA	NA	12715	778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTGTGTCTGAGTATT	2800	False	NA	NA	False	ATTAAA	-16	NA	43482149	43507690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43482319_43505386
ES.27190.1	chr5	+	170	1	Antisense	novelGene_ENSMUSG00000038095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGTGAGCAGGGAC	4461	False	NA	NA	False	NA	NA	NA	124535175	124535345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124535200_124535300
ES.27191.1	chr5	+	175	1	Intergenic	novelGene_22643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATATGG	8927	False	NA	NA	False	NA	NA	NA	124539641	124539816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124539600_124539800
ES.27192.1	chr5	+	181	1	Intergenic	novelGene_22644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCACAGG	2163	False	NA	NA	False	NA	NA	NA	124555074	124555255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124555100_124555300
ES.27193.1	chr5	-	1454	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	-141	2	-141	-2	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGAGGTCTTAAGTG	4113	False	NA	0	True	AATAAA	-36	NA	124492875	124483481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ES.27193.10	chr5	-	189	1	Intergenic	novelGene_22640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGCTTTTTTGTTT	1440	False	NA	NA	False	NA	NA	NA	124495548	124495359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124495400_124495500
ES.27193.100	chr5	-	5502	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-6	1264	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCACAGGTTGCACTAT	NA	False	NA	59	True	NA	NA	NA	124563679	124511330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.103	chr5	-	5465	32	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	-5	1179	combination_of_known_junctions	FALSE	canonical	3	24	junction_31	136.926132892471	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTCTTTTTGGTTTTT	NA	False	NA	-26	True	TATAAA	-19	NA	124564025	124511415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563909
ES.27193.106	chr5	-	5062	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-7	1178	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	102.010514484529	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTCTTTTTGGTTTT	NA	False	NA	-27	True	TATAAA	-18	NA	124563638	124511416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124552461_124552591_124563509
ES.27193.107	chr5	-	5466	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	2	1177	combination_of_known_junctions	FALSE	canonical	3	4	junction_30	136.367174362074	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTGGTCTTTTTGGTTT	NA	False	NA	-28	True	TATAAA	-17	NA	124563653	124511417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124557873_124557951_124563509
ES.27193.108	chr5	-	5899	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	-386	4648	5	1176	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAATTGGTCTTTTTGGTT	NA	False	NA	-29	True	TATAAA	-16	NA	124564059	124511418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.11	chr5	-	177	1	Intergenic	novelGene_22641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAGGGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	124499294	124499117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124499100_124499300
ES.27193.110	chr5	-	5392	31	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	6	1175	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	107.715283141355	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTGGTCTTTTTGGT	NA	False	NA	-30	True	TATAAA	-15	NA	124564058	124511419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
ES.27193.111	chr5	-	4607	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	1175	at_least_one_novel_splicesite	FALSE	non_canonical	3	12	junction_1	107.922477669225	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTGGTCTTTTTGGT	NA	False	NA	-30	True	TATAAA	-15	NA	124563651	124511419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511736_124512513_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.113	chr5	-	5316	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1174	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	112.592728332011	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACAATTGGTCTTTTTGG	NA	False	NA	-31	True	TATAAA	-14	NA	124563655	124511420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.114	chr5	-	5385	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	5	1158	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCAGTGAGGGGA	NA	False	NA	-47	True	AATAGA	-8	NA	124563668	124511436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.116	chr5	-	5248	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	-58	4881	-15	949	multi-exon	FALSE	canonical	3	24	junction_31	128.473127279141	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTGAGTTGTAAACTAG	NA	False	NA	NA	False	NA	NA	NA	124564035	124511645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ES.27193.117	chr5	-	4716	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-7	477	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACACAATGTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	124563680	124512117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.118	chr5	-	4421	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	14	5726	-3	98	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTGTGCTCTCTA	NA	False	NA	NA	False	CATAAA	-38	NA	124563659	124512496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.119	chr5	-	4301	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	6	75	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGAATCCTTTTTATT	NA	False	NA	NA	False	CATAAA	-15	NA	124563667	124512519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.12	chr5	-	10074	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGTGTTGTGGTTTGG	NA	False	NA	49	True	AATAAA	-21	NA	124563685	124506764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.120	chr5	-	176	1	Intergenic	novelGene_22642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	736	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124514027	124513851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124513900_124514000
ES.27193.121	chr5	-	4207	31	NNC	ENSMUSG00000038095.16	novel	2413	17	NA	NA	6	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.884835837752	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124563667	124513851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124513976_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
ES.27193.122	chr5	-	2070	14	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	254	combination_of_known_junctions	FALSE	canonical	3	243	junction_12	75.3751171410278	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCCTTATCTGAG	NA	False	NA	NA	False	ATTAAA	-27	NA	124563655	124536415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.123	chr5	-	1073	7	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-6	2893	combination_of_known_junctions	FALSE	canonical	3	243	junction_5	99.0982957584146	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGCATTGTGGTAAG	NA	False	NA	NA	False	NA	NA	NA	124563662	124542266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.124	chr5	-	2126	1	FSM	ENSMUSG00000038095.16	ENSMUST00000197974.2	2033	1	-64	-29	4	29	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGTGGAGACTGGTG	NA	False	NA	NA	False	NA	NA	NA	124563669	124561543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124561500_124563700
ES.27193.13	chr5	-	3847	2	NNC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	11158	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGTGTTGTGGTTTGG	NA	False	NA	49	True	AATAAA	-21	NA	124511714	124506764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124510215_124511317
ES.27193.16	chr5	-	7974	5	ISM	ENSMUSG00000038095.16	ENSMUST00000196842.2	1061	7	3050	-7421	3050	-1	3prime_fragment	FALSE	canonical	3	517	junction_3	64.5	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124519822	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745
ES.27193.18	chr5	-	11533	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	-1	intron_retention	FALSE	canonical	3	243	junction_28	69.8481451216296	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124563651	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.19	chr5	-	10142	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	-72	1	15	-1	multi-exon	FALSE	canonical	3	24	junction_31	128.473127279141	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124564049	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ES.27193.2	chr5	-	5336	3	FSM	ENSMUSG00000029394.12	ENSMUST00000111473.8	715	3	-4314	-307	103	-20	multi-exon	FALSE	canonical	3	1213	junction_1	38.5	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTACGATGTGGAA	4357	False	NA	-18	True	AATAAA	-18	NA	124492631	124483499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124484218_124486663_124486791_124488140
ES.27193.21	chr5	-	10655	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	3	-1	intron_retention	FALSE	canonical	3	34	junction_28	113.918508885372	905	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124563644	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
ES.27193.22	chr5	-	10047	31	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	109.229528974541	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124563674	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512720_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.23	chr5	-	10163	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	3	-5	3	-1	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGGTGTTGTGGTTTG	NA	False	NA	48	True	AATAAA	-20	NA	124563670	124506765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.26	chr5	-	10124	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_30	146.851245283842	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGGTGTTGTGGTT	NA	False	NA	46	True	AATAAA	-18	NA	124563664	124506767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124557873_124557951_124563509
ES.27193.28	chr5	-	10024	31	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	107.715283141355	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGTGGTGTTGTG	NA	False	NA	43	True	AATAAA	-15	NA	124564041	124506770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
ES.27193.3	chr5	-	4061	4	FSM	ENSMUSG00000029394.12	ENSMUST00000111474.8	1286	4	-2610	-165	407	-23	multi-exon	FALSE	canonical	1	5	junction_3	588.445975996664	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTATTACGATGTG	4661	False	NA	-21	True	AATAAA	-15	NA	124492327	124483502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124489203
ES.27193.32	chr5	-	10106	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	131.204727586711	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTGTGGTGTTGT	NA	False	NA	42	True	AATAAA	-14	NA	124563667	124506771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534062_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.34	chr5	-	9509	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.579244485716	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGAGTTGTGGTGTTG	NA	False	NA	41	True	AATAAA	-13	NA	124563673	124506772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124508948_124509492_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.35	chr5	-	10134	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	116.471144818973	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGAGTTGTGGTGTT	NA	False	NA	40	True	AATAAA	-12	NA	124563658	124506773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551253_124551353_124552461_124552591_124563509
ES.27193.39	chr5	-	9235	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	-21	at_least_one_novel_splicesite	FALSE	non_canonical	3	12	junction_1	107.922477669225	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAAACAAATGC	NA	False	NA	22	True	NA	NA	NA	124563651	124506791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511736_124512513_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.4	chr5	-	995	4	NNC	ENSMUSG00000029394.12	novel	1315	4	NA	NA	772	-24	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	589.387440955061	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	5026	False	NA	-22	True	AATAAA	-14	NA	124491962	124483503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124484218_124486663_124486791_124488140_124488236_124491903
ES.27193.42	chr5	-	8209	32	NNC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	1	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.416552063891	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTAAACAAATGC	NA	False	NA	22	True	NA	NA	NA	124564019	124506791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124507236_124509009_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538927_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
ES.27193.44	chr5	-	8424	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	-2	1739	-2	-1739	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCCTGAACTTCCTTA	NA	False	NA	NA	False	AAAAAG	-17	NA	124563675	124508509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.45	chr5	-	8137	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	6	-1910	multi-exon	FALSE	canonical	3	85	junction_29	90.1802454347218	881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTCTTGTTACCCACATC	NA	False	NA	NA	False	AGTAAA	-42	NA	124563667	124508680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
ES.27193.46	chr5	-	7359	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	22	2780	4	-2780	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTGTAGCCTTTTTA	NA	False	NA	NA	False	TATAAA	-40	NA	124563651	124509550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.47	chr5	-	5613	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-7	1374	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACTCTTGTTTAGGCCC	NA	False	NA	NA	False	AATAAA	-21	NA	124563680	124511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.48	chr5	-	5560	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	0	1372	multi-exon	FALSE	canonical	2	15	junction_1	123.037144346286	794	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACTCTTGTTTAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	124563647	124511222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512720_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
ES.27193.49	chr5	-	5713	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	-101	4459	-14	1371	multi-exon	FALSE	canonical	3	24	junction_31	128.473127279141	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGACTCTTGTTTAGG	NA	False	NA	NA	False	AATAAA	-18	NA	124564078	124511223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ES.27193.5	chr5	-	1150	5	NNC	ENSMUSG00000029394.12	novel	1315	4	NA	NA	18	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	523.579268115154	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4272	False	NA	-22	True	AATAAA	-14	NA	124492716	124483503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379_124492445_124492567
ES.27193.50	chr5	-	5721	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	-13	4453	-13	1371	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGACTCTTGTTTAGG	NA	False	NA	NA	False	AATAAA	-18	NA	124563686	124511223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.52	chr5	-	4835	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-11	1370	at_least_one_novel_splicesite	FALSE	non_canonical	3	12	junction_1	107.922477669225	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563684	124511224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511736_124512513_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.53	chr5	-	5035	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	1	1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.579244485716	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563654	124511224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511321_124511868_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.55	chr5	-	5275	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-3	1370	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	102.010514484529	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563659	124511224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124552461_124552591_124563509
ES.27193.57	chr5	-	5590	31	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	5	1370	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	111.262797016793	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563668	124511224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542379_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.58	chr5	-	5758	33	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	4	junction_31	150.750297988926	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563647	124511224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124557873_124557951_124563509
ES.27193.6	chr5	-	2492	3	NIC	ENSMUSG00000029394.12	novel	1315	4	NA	NA	149	-24	intron_retention	FALSE	canonical	3	1091	junction_2	61	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4403	False	NA	-22	True	AATAAA	-14	NA	124492585	124483503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124484218_124486663_124488236_124492379
ES.27193.60	chr5	-	5605	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	0	1369	multi-exon	FALSE	canonical	0	0	junction_9	141.010893984196	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGTGGACTCTTGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	124563647	124511225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
ES.27193.62	chr5	-	5571	31	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	-3	1368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	103.020623609493	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563650	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548440_124552461_124552591_124563509
ES.27193.63	chr5	-	7503	29	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	5	1368	intron_retention	FALSE	canonical	0	0	junction_27	106.33569773244	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563668	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548339_124552461_124552591_124563509
ES.27193.65	chr5	-	5670	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	1368	combination_of_known_junctions	FALSE	canonical	3	4	junction_30	146.851245283842	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563669	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124557873_124557951_124563509
ES.27193.66	chr5	-	5545	31	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	1	1368	multi-exon	TRUE	canonical	1	2	junction_3	140.56210964078	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563654	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
ES.27193.67	chr5	-	6080	30	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	-4	1368	intron_retention	FALSE	canonical	3	85	junction_28	91.5007910792752	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563635	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
ES.27193.68	chr5	-	2335	6	ISM	ENSMUSG00000038095.16	ENSMUST00000168651.6	4170	31	32520	-1368	2802	1368	intron_retention	FALSE	canonical	3	491	junction_1	64.5693425706039	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124520070	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745
ES.27193.7	chr5	-	1185	4	NNC	ENSMUSG00000029394.12	novel	1315	4	NA	NA	100	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	545.337204550237	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4354	False	NA	-22	True	AATAAA	-14	NA	124492634	124483503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124484218_124486663_124486791_124488146_124488236_124492379
ES.27193.72	chr5	-	5503	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	1368	combination_of_known_splicesites	FALSE	canonical	1	18	junction_7	109.439671130365	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563651	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.74	chr5	-	5587	31	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	6	1368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	111.388429480904	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563667	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530806_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
ES.27193.76	chr5	-	5700	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	5	1368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	153.409621493247	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563668	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517488_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532053_124533953_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.78	chr5	-	5138	29	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	2	1368	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	105.568401996052	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGTGGACTCTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	124563653	124511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124563509
ES.27193.79	chr5	-	5648	32	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	4	1367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	116.471144818973	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAGTGGACTCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124563651	124511227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548431_124551266_124551353_124552461_124552591_124563509
ES.27193.8	chr5	-	1155	4	NNC	ENSMUSG00000029394.12	novel	1315	4	NA	NA	142	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	567.05692444018	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTATTACGATGT	4396	False	NA	-22	True	AATAAA	-14	NA	124492592	124483503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124484218_124486657_124486791_124488140_124488236_124492379
ES.27193.83	chr5	-	5552	31	NIC	ENSMUSG00000038095.16	novel	4170	31	NA	NA	-9	1367	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	121.800091224195	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAGTGGACTCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124564029	124511227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563909
ES.27193.88	chr5	-	5201	30	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	-11	1367	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	131.616086754275	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAGTGGACTCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124563988	124511227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124552461_124552591_124563909
ES.27193.9	chr5	-	10165	33	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	1	21289	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	129.191823827013	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGAAGCTCATTCACAT	NA	False	NA	NA	False	NA	NA	NA	124563654	124485475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124485500_124506771_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.93	chr5	-	5441	30	Fusion	ENSMUSG00002076658.1_ENSMUSG00000038095.16	novel	4170	31	NA	NA	0	1367	multi-exon	FALSE	canonical	0	0	junction_29	104.322866162125	794	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAGTGGACTCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124563647	124511227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124563509
ES.27193.94	chr5	-	4907	33	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	1	1367	at_least_one_novel_splicesite	FALSE	non_canonical	3	12	junction_1	127.873457346511	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAGTGGACTCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	124563654	124511227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511736_124512513_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ES.27193.97	chr5	-	4833	33	NNC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	7	1365	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_32	164.119380020878	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACGAAGTGGACTCTTG	NA	False	NA	NA	False	AATAAA	-12	NA	124564013	124511229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124511736_124512513_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124557873_124557951_124563909
ES.27194.1	chr5	+	2753	8	NNC	ENSMUSG00000049327.18	novel	1032	6	NA	NA	-12956	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.460273692026	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	NA	False	NA	32	True	AATAAA	-41	NA	124565036	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124565134_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.10	chr5	+	3347	9	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	335.229562203276	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	NA	False	NA	32	True	AATAAA	-41	NA	124578022	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578079_124583156_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.11	chr5	+	2083	9	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	343.816448123123	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAGAAAACAACTTAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	124578028	124599609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124596007_124596150_124597837_124598029_124598550
ES.27194.12	chr5	+	1338	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	37	1364	0	-16	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTATATTCTAGTT	NA	False	NA	75	True	NA	NA	NA	124578029	124599007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.14	chr5	+	2766	8	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	293.228196990337	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	NA	False	NA	27	True	AATAAA	-36	NA	124578029	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578145_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.16	chr5	+	1168	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	0	621	0	53	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTGTTACAGGTTTC	NA	False	NA	21	True	ATTAAA	-23	NA	124578029	124598953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.17	chr5	+	1879	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	37	823	0	-26	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAATAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	124578029	124599548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.18	chr5	+	1096	3	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCACCTATGTGTTGTT	NA	False	NA	22	True	AATAAA	-31	NA	124578038	124600364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578079_124584031_124584084_124599360
ES.27194.19	chr5	+	3119	7	NNC	ENSMUSG00000049327.18	novel	1789	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.698312918845	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	NA	False	NA	27	True	AATAAA	-36	NA	124578049	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578634_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.2	chr5	+	2630	7	NNC	ENSMUSG00000049327.18	novel	1032	6	NA	NA	-12953	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.698312918845	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	NA	False	NA	28	True	AATAAA	-37	NA	124565039	124600370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124565134_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.20	chr5	+	5302	7	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	-950	0	intron_retention	FALSE	canonical	2	3	junction_1	376.510587131653	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	3446	False	NA	29	True	AATAAA	-38	NA	124582605	124600371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124585434_124588301_124588396_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.21	chr5	+	4015	7	ISM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	4680	-3	-883	3	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	3513	False	NA	32	True	AATAAA	-41	NA	124582672	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.22	chr5	+	2876	8	NNC	ENSMUSG00000049327.18	novel	1032	6	NA	NA	-842	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.460273692026	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	3554	False	NA	29	True	AATAAA	-38	NA	124582713	124600371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124582937_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.23	chr5	+	4527	6	FSM	ENSMUSG00000049327.18	ENSMUST00000198451.2	1032	6	-1972	-1523	-266	3	multi-exon	FALSE	canonical	3	722	junction_5	46.3163038248952	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	4130	False	NA	32	True	AATAAA	-41	NA	124583289	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.24	chr5	+	2895	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	-119	-1351	-119	3	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	4277	False	NA	32	True	AATAAA	-41	NA	124583436	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.25	chr5	+	2044	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	-33	-586	-33	3	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAGAAAACAACTTAAC	4363	False	NA	NA	False	AAAAAG	-19	NA	124583522	124599609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.26	chr5	+	1380	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	-24	69	-24	54	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGTTACAGGTTTCC	4372	False	NA	22	True	ATTAAA	-24	NA	124583531	124598954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.27	chr5	+	3435	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	-36	-765	-24	0	intron_retention	FALSE	canonical	3	31	junction_1	306.849266289203	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4372	False	NA	29	True	AATAAA	-38	NA	124583531	124600371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837
ES.27194.28	chr5	+	2501	6	NNC	ENSMUSG00000049327.18	novel	2112	8	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	322.841385203322	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACCTATGTGTTGT	4388	False	NA	21	True	AATAAA	-30	NA	124583547	124600363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588789_124597922_124598029_124598550
ES.27194.29	chr5	+	5392	6	NIC	ENSMUSG00000049327.18	novel	2112	8	NA	NA	2	-35	intron_retention	FALSE	canonical	3	345	junction_1	182.652237872959	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAAATATTTAT	4398	False	NA	-6	True	AATAAA	-34	NA	124583557	124600336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124598029_124598550
ES.27194.3	chr5	+	1930	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	-106	-35	-69	3	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAGAAAACAACTTAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	124577923	124599609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.30	chr5	+	2064	8	FSM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	-10	58	2	-26	multi-exon	FALSE	canonical	3	31	junction_1	287.390653562537	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAATAAAAACAAAA	4398	False	NA	NA	False	NA	NA	NA	124583557	124599548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.31	chr5	+	2462	1	NIC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	2	-2828	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	703	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAACCCCCCCCCCCCA	4398	False	NA	NA	False	NA	NA	NA	124583557	124586019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124583600_124586000
ES.27194.33	chr5	+	5330	7	NNC	ENSMUSG00000049327.18	novel	2112	8	NA	NA	-4	-26	intron_retention	FALSE	canonical	2	3	junction_3	369.147516433321	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAATAAAAACAAAA	4404	False	NA	NA	False	NA	NA	NA	124583563	124599548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124583792_124584031_124584148_124585276_124585434_124588301_124588396_124588723_124588944_124589348_124589437_124595121
ES.27194.34	chr5	+	3281	6	ISM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	13	-1347	1	-1	intron_retention	FALSE	canonical	3	345	junction_1	186.651118400078	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTGTTGTTGTTGTT	4409	False	NA	28	True	AATAAA	-37	NA	124583568	124600370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837
ES.27194.35	chr5	+	2667	7	NNC	ENSMUSG00000049327.18	novel	2112	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.698312918845	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	4410	False	NA	27	True	AATAAA	-36	NA	124583569	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124583702_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.37	chr5	+	2822	8	NNC	ENSMUSG00000049327.18	novel	2112	8	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	354.712933660619	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTGTTGTTGTTAAT	4443	False	NA	31	True	AATAAA	-40	NA	124583602	124600373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124583792_124585276_124585434_124588301_124588396_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.38	chr5	+	2116	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	239	-3	-40	3	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAGAAAACAACTTAAC	4647	False	NA	NA	False	AAAAAG	-19	NA	124583806	124599609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.39	chr5	+	2850	7	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	-22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	314.305053517545	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCACCTATGTGTTGT	4665	False	NA	21	True	AATAAA	-30	NA	124583824	124600363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124584148_124585276_124585434_124588725_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.4	chr5	+	2080	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-54	713	-54	52	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCGGTTTTCTTTTCTT	NA	False	NA	NA	False	AAAACA	-37	NA	124577938	124599658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.40	chr5	+	2847	7	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	304.187259576875	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTATGTGTTGTTGTTG	4683	False	NA	26	True	AATAAA	-35	NA	124583842	124600368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595113_124595182_124597837_124598029_124598550
ES.27194.41	chr5	+	1777	6	FSM	ENSMUSG00000049327.18	ENSMUST00000198451.2	1032	6	13	-758	13	3	multi-exon	FALSE	canonical	3	722	junction_5	46.3163038248952	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACAGAAAACAACTTAAC	6115	False	NA	NA	False	AAAAAG	-19	NA	124585274	124599609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.42	chr5	+	2380	5	ISM	ENSMUSG00000049327.18	ENSMUST00000198451.2	1032	6	3460	-1518	275	-2	3prime_fragment	FALSE	canonical	3	722	junction_4	47.2255227604735	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	9562	False	NA	27	True	AATAAA	-36	NA	124588721	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.43	chr5	+	4085	1	NIC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	7051	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	NA	False	NA	27	True	AATAAA	-36	NA	124596284	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124596300_124600400
ES.27194.6	chr5	+	2774	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	-32	-3	-32	3	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	NA	False	NA	32	True	AATAAA	-41	NA	124577960	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.7	chr5	+	2646	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	-57	-800	-20	3	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTTGTTGTTAATA	NA	False	NA	32	True	AATAAA	-41	NA	124577972	124600374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27194.8	chr5	+	2699	7	NNC	ENSMUSG00000049327.18	novel	1789	7	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	294.116426304656	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATGTGTTGTTGTTGT	NA	False	NA	27	True	AATAAA	-36	NA	124577980	124600369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124578145_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ES.27195.1	chr5	+	125	1	Intergenic	novelGene_22648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAACCCAAAAAGT	2108	False	NA	NA	False	NA	NA	NA	124600883	124601008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124600900_124601000
ES.27196.1	chr5	+	173	1	Intergenic	novelGene_22650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAAGAAAGCCTTCAGGG	5771	False	NA	NA	False	NA	NA	NA	124604546	124604719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124604500_124604700
ES.27197.1	chr5	+	178	1	Intergenic	novelGene_22651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCATGGTGGCACACA	NA	False	NA	NA	False	NA	NA	NA	124609510	124609688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124609500_124609700
ES.27198.1	chr5	+	177	1	Antisense	novelGene_ENSMUSG00000029401.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124615528	124615705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124615500_124615700
ES.27199.1	chr5	+	172	1	Intergenic	novelGene_22653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAGAATTAGA	NA	False	NA	NA	False	NA	NA	NA	124618896	124619068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124618900_124619100
ES.272.1	chr1	+	2225	7	FSM	ENSMUSG00000037447.17	ENSMUST00000126413.8	870	7	-31	-1324	-31	1	multi-exon	FALSE	canonical	2	2	junction_1	8.27479439153761	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGGGGTGTACAGCAC	NA	False	NA	NA	False	AATAAA	-24	NA	36346782	36359608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36346918_36355292_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ES.272.10	chr1	+	2420	7	NNC	ENSMUSG00000037447.17	novel	563	4	NA	NA	-719	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.92094912738176	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCTGGGGTGTACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	36354353	36359606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36354683_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ES.272.2	chr1	+	2512	6	ISM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	0	2466	0	-1	intron_retention	FALSE	canonical	3	8	junction_1	7.07106781186548	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCTGGGGTGTACAGC	NA	False	NA	NA	False	AATAAA	-22	NA	36346834	36359606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568
ES.272.3	chr1	+	2479	6	NIC	ENSMUSG00000037447.17	novel	4640	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	8	junction_1	7.08237248385031	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCCTGGGGTGTACAG	NA	False	NA	NA	False	AATAAA	-21	NA	36346834	36359605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357735_36358072
ES.272.4	chr1	+	4501	6	FSM	ENSMUSG00000037447.17	ENSMUST00000116629.9	2056	6	2	-2447	2	-13	multi-exon	FALSE	canonical	3	6	junction_2	8.63481325796916	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGGCTCCCAGATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	36346836	36362056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36346918_36355289_36355409_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ES.272.6	chr1	+	4617	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	5	18	1	-15	multi-exon	FALSE	canonical	3	8	junction_1	6.46572158042361	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCCTGGCTCCCAGATT	NA	False	NA	NA	False	AATAAA	-13	NA	36346839	36362054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ES.272.7	chr1	+	2311	5	NNC	ENSMUSG00000037447.17	novel	563	4	NA	NA	-739	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.25675429078681	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGGGGTGTACAGCAC	NA	False	NA	NA	False	AATAAA	-24	NA	36354333	36359608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36354726_36355289_36355409_36357164_36357263_36357568_36357735_36358072
ES.272.8	chr1	+	4724	5	NNC	ENSMUSG00000037447.17	novel	563	4	NA	NA	-727	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.25675429078681	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCCTGGCTCCCAGAT	NA	False	NA	NA	False	AATAAA	-12	NA	36354345	36362053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36354706_36355289_36355409_36357164_36357263_36357568_36357735_36358072
ES.272.9	chr1	+	4873	7	NNC	ENSMUSG00000037447.17	novel	563	4	NA	NA	-726	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.92094912738176	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTGGCTCCCAGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	36354346	36362055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36354680_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ES.2720.1	chr10	-	1956	1	Intergenic	novelGene_2073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	43621586	43619630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_43619600_43621600
ES.27200.1	chr5	+	1113	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	1	1	1	-1	multi-exon	FALSE	canonical	3	127	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTGAGGTGGGGTTTG	2221	False	NA	9	True	AATAAA	-23	NA	124621197	124629186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124621310_124628185
ES.27200.2	chr5	+	3574	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	4	-2463	4	2463	multi-exon	FALSE	canonical	3	127	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATCAGTTTTTCGTCA	2224	False	NA	NA	False	AATAAA	-16	NA	124621200	124631650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124621310_124628185
ES.27200.4	chr5	+	1170	2	FSM	ENSMUSG00000029402.9	ENSMUST00000111453.2	1181	2	27	-16	27	-1	multi-exon	FALSE	canonical	3	28	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTGAGGTGGGGTTTG	2571	False	NA	9	True	AATAAA	-23	NA	124621547	124629186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124621717_124628185
ES.27201.1	chr5	+	1779	1	FSM	ENSMUSG00000106662.2	ENSMUST00000198678.2	1364	1	-415	0	-415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCACAATAGCTC	NA	False	NA	NA	False	ATTAAA	-27	NA	124668780	124670559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124668800_124670600
ES.27202.1	chr5	+	1860	4	NNC	ENSMUSG00000029390.14	novel	1630	4	NA	NA	-3872	0	at_least_one_novel_splicesite	FALSE	canonical	2	72	junction_1	1625.2932043173	938	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124674885	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124675029_124681034_124681228_124684958_124685067_124687143
ES.27202.10	chr5	+	2120	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	77	-123	77	123	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGGTGCAAGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	124678834	124688692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ES.27202.11	chr5	+	1974	4	NNC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	77	0	intron_retention	FALSE	canonical	0	0	junction_1	1659.22692842179	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678834	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681047_124681228_124684958_124685067_124687143
ES.27202.12	chr5	+	920	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	77	115	intron_retention	FALSE	non_canonical	0	0	junction_2	1550.961798369	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTAGCCCACAGCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	124678834	124687588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681091_124681186_124681228_124684958_124685067_124687143
ES.27202.13	chr5	+	3922	3	NIC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	77	5	intron_retention	FALSE	canonical	3	3477	junction_1	42	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTTTGTGTTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	124678834	124688564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124681228_124684958_124685067_124687143
ES.27202.14	chr5	+	2359	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	78	-363	78	363	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGCTGTGGGTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	124678835	124688932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ES.27202.15	chr5	+	2092	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	78	0	intron_retention	FALSE	canonical	2	13	junction_1	1734.95151229076	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678835	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124680714_124680821_124681034_124681228_124684958_124685067_124687143
ES.27202.16	chr5	+	1919	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	81	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1550.961798369	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACAGTATTTTGTGTT	NA	False	NA	1	True	AATAAA	-11	NA	124678838	124688558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143_124688165_124688227
ES.27202.17	chr5	+	1938	5	FSM	ENSMUSG00000029390.14	ENSMUST00000200031.2	455	5	-179	-1304	81	0	multi-exon	FALSE	canonical	0	0	junction_1	1550.961798369	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678838	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679033_124679077_124679105_124681034_124681228_124684958_124685067_124687143
ES.27202.18	chr5	+	863	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	-557	119	84	-119	mono-exon	FALSE	NA	NA	NA	NA	NA	824	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGATTGCCTTTTGTA	NA	False	NA	NA	False	AATAAA	-22	NA	124678841	124679704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124678800_124679700
ES.27202.19	chr5	+	1966	4	NNC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	92	0	intron_retention	FALSE	non_canonical	0	0	junction_3	1692.54095634017	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678849	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681228_124684958_124685067_124687149
ES.27202.2	chr5	+	1860	4	NNC	ENSMUSG00000029390.14	novel	1630	4	NA	NA	-1517	0	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_1	1643.67393360119	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124677240	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124677384_124681034_124681228_124684958_124685067_124687143
ES.27202.20	chr5	+	3337	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	100	-4	intron_retention	FALSE	canonical	0	0	junction_1	1738.27592386824	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTGTTTTATATT	NA	False	NA	8	True	AATAAA	-18	NA	124678857	124688565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124679453_124680821_124681034_124681228_124684958_124685067_124687143
ES.27202.21	chr5	+	797	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	100	37392	intron_retention	FALSE	non_canonical	0	0	junction_4	1550.961798369	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTCCAAAGCAGTACAT	NA	False	NA	NA	False	NA	NA	NA	124678857	124725961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143_124687362_124725930
ES.27202.22	chr5	+	1926	4	NNC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_2	1710.88170900919	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678860	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681228_124684993_124685067_124687143
ES.27202.23	chr5	+	1927	5	NNC	ENSMUSG00000029390.14	novel	455	5	NA	NA	105	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1550.961798369	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTTTTATATTAAT	NA	False	NA	11	True	AATAAA	-21	NA	124678862	124688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143_124687848_124687888
ES.27202.24	chr5	+	7616	2	NIC	ENSMUSG00000029390.14	novel	1630	4	NA	NA	109	0	intron_retention	FALSE	canonical	3	3561	junction_1	0	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678866	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124685067_124687143
ES.27202.25	chr5	+	4643	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	-239	-3979	142	-3453	mono-exon	FALSE	NA	NA	NA	NA	NA	835	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124679159	124683802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679200_124683800
ES.27202.26	chr5	+	2187	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	-13	625	-13	-625	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGTTTCTAAGCATTT	NA	False	NA	64	True	NA	NA	NA	124690913	124707098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.27	chr5	+	5189	11	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-4	-687	intron_retention	FALSE	canonical	3	95	junction_2	8.89719056781409	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690922	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124694912_124695024_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.28	chr5	+	4107	13	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-1	-687	intron_retention	FALSE	canonical	3	73	junction_4	12.209684225601	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690930	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124692657_124692733_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.29	chr5	+	2207	14	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-1	-687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.827710399766	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690930	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694720_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.3	chr5	+	239	1	Intergenic	novelGene_22656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATATCATATGCATAGAC	NA	False	NA	NA	False	NA	NA	NA	124677684	124677923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124677700_124677900
ES.27202.30	chr5	+	4094	13	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	0	-749	intron_retention	FALSE	canonical	0	0	junction_7	31.0398489400677	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGATTAATTATGTTTT	NA	False	NA	-60	True	NA	NA	NA	124690931	124706974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699918_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.31	chr5	+	2781	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	16	2	11	-2	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATCATTTTTTTTCT	NA	False	NA	3	True	AATAAA	-16	NA	124690942	124707721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.32	chr5	+	2120	14	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	12	-685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.8804323376753	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTAATTCCTATTC	NA	False	NA	4	True	NA	NA	NA	124690943	124707038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698757_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.33	chr5	+	2847	13	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-10	-39	intron_retention	FALSE	canonical	0	0	junction_3	31.0456652905576	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGAAAAACAAAAACAAAATA	NA	False	NA	-34	True	NA	NA	NA	124690948	124707684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694823_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.34	chr5	+	5267	11	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-8	-689	intron_retention	FALSE	canonical	3	73	junction_3	13.0522028792078	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTAATTCCT	NA	False	NA	0	True	NA	NA	NA	124690950	124707034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.35	chr5	+	4143	12	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-6	-687	intron_retention	FALSE	canonical	0	0	junction_4	31.3089114132749	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690952	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695028_124695088_124696084_124697381_124698780_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.36	chr5	+	1737	13	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-1	-723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.9345350538285	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTTGTGCTTTATT	NA	False	NA	-34	True	NA	NA	NA	124690957	124707000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696147_124698810_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.37	chr5	+	4584	12	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	0	-688	intron_retention	FALSE	canonical	3	73	junction_5	13.5701422369325	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTGTGTAATTCCTA	NA	False	NA	1	True	NA	NA	NA	124690958	124707035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.38	chr5	+	2156	13	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	1	-687	intron_retention	FALSE	canonical	3	73	junction_4	12.8352271329944	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690959	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.39	chr5	+	1952	14	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	2	-687	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	29.460835500752	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690960	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124705022_124705066_124705897_124706191_124706618
ES.27202.4	chr5	+	2065	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	8	1	8	-1	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTTTTATATTAAT	NA	False	NA	11	True	AATAAA	-21	NA	124678765	124688568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ES.27202.40	chr5	+	4187	12	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	5	-687	intron_retention	FALSE	canonical	3	73	junction_3	12.506527221435	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690963	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124692657_124692733_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.41	chr5	+	2281	14	NNC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	-2	-687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.0888836934795	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690974	124707036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694652_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699918_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.42	chr5	+	1938	12	ISM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	49	2072	-1	-287	5prime_fragment	FALSE	canonical	3	73	junction_5	12.5362284915914	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTCTAGTTAAAGTA	NA	False	NA	NA	False	NA	NA	NA	124690975	124705651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896
ES.27202.43	chr5	+	4102	12	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	1	-722	intron_retention	FALSE	canonical	3	73	junction_3	12.5559903059051	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTTTGTGCTTTATTA	NA	False	NA	-33	True	NA	NA	NA	124690977	124707001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.44	chr5	+	4412	12	NIC	ENSMUSG00000029389.18	novel	2799	14	NA	NA	4	-689	intron_retention	FALSE	canonical	3	73	junction_5	12.0714128528712	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTAATTCCT	NA	False	NA	0	True	NA	NA	NA	124690980	124707034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ES.27202.45	chr5	+	1820	1	Antisense	novelGene_ENSMUSG00000029388.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124712617	124714437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_124712600_124714400
ES.27202.46	chr5	+	1824	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-5	255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	215.249983868886	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717197	124734905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722213_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.47	chr5	+	1834	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	1	837	1	256	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717203	124734906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.48	chr5	+	1852	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	1	253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	215.249983868886	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717205	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722175_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.49	chr5	+	1914	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	5	253	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	271.182486212518	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717209	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721585_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.5	chr5	+	9772	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	-607	-8740	34	4	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATTTTGTGTTTTATA	NA	False	NA	6	True	AATAAA	-16	NA	124678791	124688563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124678800_124688600
ES.27202.50	chr5	+	1818	12	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	5	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	223.001463879863	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717209	124734906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727483_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.51	chr5	+	1929	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	9	256	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	210.460655467952	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717213	124734906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727328_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.53	chr5	+	1793	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	10	253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	218.408066090365	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717214	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733642_124733752_124733865_124733903_124733980
ES.27202.54	chr5	+	1809	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	10	258	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	218.341268939755	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTAGAGTGTTTTTC	NA	False	NA	23	True	AATAAA	-24	NA	124717214	124734908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733881_124733903_124733980
ES.27202.55	chr5	+	1798	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-4	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	218.636732580171	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717224	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730586_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.56	chr5	+	2300	12	NIC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-4	253	intron_retention	FALSE	canonical	3	570	junction_1	82.1769910086739	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717224	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.57	chr5	+	3198	12	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-2	253	intron_retention	FALSE	canonical	1	1	junction_10	228.04958138582	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717226	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733881_124733903_124733980
ES.27202.58	chr5	+	2688	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-2	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	273.637496133006	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717226	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980_124734389_124734592
ES.27202.59	chr5	+	1737	12	NIC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	253	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	225.696644207688	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717228	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124733615_124733752_124733865_124733903_124733980
ES.27202.6	chr5	+	819	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	50	1205	50	-109	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTCATGACTTATGTTT	NA	False	NA	NA	False	NA	NA	NA	124678807	124687364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ES.27202.60	chr5	+	2374	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	14	253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.207205142557	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717242	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717847_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.61	chr5	+	3016	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	15	253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.636732580171	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124717243	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124731600_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.62	chr5	+	2877	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	16	256	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	213.481117431964	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCCTTAGAGTGTTTT	NA	False	NA	21	True	AATAAA	-22	NA	124717244	124734906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124717265_124720510_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.63	chr5	+	6335	7	NIC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-1400	253	intron_retention	FALSE	canonical	3	688	junction_6	50.6874957185914	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124720509	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124733903_124733980
ES.27202.64	chr5	+	4782	10	NIC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	-777	253	intron_retention	FALSE	canonical	3	664	junction_8	60.1645890684693	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTCCTTAGAGTGT	NA	False	NA	18	True	AATAAA	-19	NA	124721132	124734903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.65	chr5	+	1957	11	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	4529	838	-178	255	3prime_fragment	FALSE	canonical	3	664	junction_9	63.5311734505196	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124721731	124734905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ES.27202.7	chr5	+	1813	3	NIC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	58	0	intron_retention	FALSE	canonical	3	12	junction_1	1774.5	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678815	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124679105_124684958_124685067_124687143
ES.27202.8	chr5	+	1003	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	-578	0	63	0	mono-exon	FALSE	NA	NA	NA	NA	NA	824	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATATACAGTAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	124678820	124679823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124678800_124679800
ES.27202.9	chr5	+	1956	4	NNC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_1	1638.9609174379	850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	False	NA	2	True	AATAAA	-12	NA	124678829	124688559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124679069_124681034_124681228_124684958_124685067_124687143
ES.27203.1	chr5	-	180	1	Intergenic	novelGene_22645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAACCAAAC	5525	False	NA	NA	False	NA	NA	NA	124573564	124573384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124573400_124573600
ES.27204.1	chr5	-	497	2	Antisense	novelGene_ENSMUSG00000106662.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGACAGAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	124725153	124576172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_124576297_124724780
ES.27204.12	chr5	-	217	1	Intergenic	novelGene_22655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGAGAGAAAGAATAGTC	NA	False	NA	NA	False	NA	NA	NA	124638566	124638349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124638300_124638600
ES.27204.13	chr5	-	1282	4	ISM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	7	21362	7	-20778	5prime_fragment	FALSE	canonical	3	33	junction_1	7.11805216802087	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACACAGAAATATCAT	NA	False	NA	NA	False	NA	NA	NA	124669447	124652504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124652807_124653580_124653700_124659313_124659465_124668737
ES.27204.14	chr5	-	1228	9	NNC	ENSMUSG00000029388.15	novel	619	6	NA	NA	-17	2613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	284.955588644968	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATTTTTTAAAAGGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	124717155	124705662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124706059_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ES.27204.15	chr5	-	2016	5	ISM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	4498	-567	283	567	3prime_fragment	FALSE	canonical	0	0	junction_4	293.533643727597	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTTGTTTTTGTTT	NA	False	NA	NA	False	AATATA	-14	NA	124712696	124707708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660
ES.27204.16	chr5	-	1383	8	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	4	-433	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	286.265967382839	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCTCTCTAAGTTGAC	NA	False	NA	2	True	AATAAA	-24	NA	124717134	124708708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124716499_124716602_124717063
ES.27204.17	chr5	-	1544	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	30	439	-26	-439	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGTATTGCCTCTCTAA	NA	False	NA	-4	True	AATAAA	-18	NA	124717164	124708714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ES.27204.19	chr5	-	1586	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	-19	-441	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	226.339761199839	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACGGTATTGCCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	124717157	124708716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711869_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ES.27204.2	chr5	-	210	1	Intergenic	novelGene_22646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTGATAGAAACGAAGTA	NA	False	NA	NA	False	NA	NA	NA	124579613	124579403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124579400_124579600
ES.27204.20	chr5	-	3850	8	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	7	-441	intron_retention	FALSE	canonical	0	0	junction_4	307.97634417505	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACGGTATTGCCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	124717088	124708716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124714978_124715078_124715216_124716499_124716602_124716766
ES.27204.22	chr5	-	1764	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	6	-441	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACGGTATTGCCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	124717089	124708716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
ES.27204.23	chr5	-	1630	8	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	-13	-441	intron_retention	FALSE	canonical	0	0	junction_4	236.129417991101	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACGGTATTGCCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	124717151	124708716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124715216_124716499_124716602_124717063
ES.27204.25	chr5	-	3613	8	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	-13	-444	intron_retention	FALSE	canonical	0	0	junction_4	241.290831376002	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATACGGTATTGCCTC	NA	False	NA	-9	True	AATAAA	-13	NA	124717151	124708719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124714978_124715078_124715216_124716499_124716602_124717063
ES.27204.26	chr5	-	1181	6	NNC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	-18	-444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	330.530240673981	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATACGGTATTGCCTC	NA	False	NA	-9	True	AATAAA	-13	NA	124717156	124708719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124717057
ES.27204.28	chr5	-	3039	1	Antisense	novelGene_ENSMUSG00000029387.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATTGCTTCCCTACGCC	NA	False	NA	NA	False	NA	NA	NA	124720296	124717257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_124717300_124720300
ES.27204.29	chr5	-	1831	1	Intergenic	novelGene_22657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGGGATGGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	124726490	124724659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124724700_124726500
ES.27204.3	chr5	-	265	1	Intergenic	novelGene_22647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCGTCTCATACCTAT	NA	False	NA	NA	False	AATAAA	-30	NA	124582001	124581736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124581700_124582000
ES.27204.4	chr5	-	1394	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	0	-3	0	3	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCATGTGTATCCAACTG	NA	False	NA	51	True	AATAAA	-27	NA	124616429	124601324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ES.27204.5	chr5	-	178	1	Intergenic	novelGene_22649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124602622	124602444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124602400_124602600
ES.27204.6	chr5	-	200	1	Intergenic	novelGene_22652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATTCATTTTCCCCT	NA	False	NA	NA	False	NA	NA	NA	124612829	124612629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124612600_124612800
ES.27204.7	chr5	-	176	1	Intergenic	novelGene_22654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGAGGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	124624898	124624722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124624700_124624900
ES.27204.8	chr5	-	3047	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	48	-846	48	846	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTGTGTAAGTGCCT	NA	False	NA	NA	False	AAAAAG	-11	NA	124669406	124630296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ES.27204.9	chr5	-	2240	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	7	2	7	-2	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTCCTGTGTGCCT	NA	False	NA	0	True	NA	NA	NA	124669447	124631144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ES.27205.1	chr5	+	2719	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	19	-3	-16	3	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTGGTGATGGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	124736830	124765806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ES.27205.3	chr5	+	2411	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	41	283	-2	-283	multi-exon	FALSE	canonical	3	31	junction_8	6.97499240366195	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCCTAGTGTTAAGTGA	NA	False	NA	31	True	AATAAA	-21	NA	124736852	124765520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ES.27205.4	chr5	+	6106	16	NIC	ENSMUSG00000118662.2	novel	2735	18	NA	NA	-2	-280	intron_retention	FALSE	canonical	3	31	junction_8	7.24062612393891	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAGTGTTAAGTGAACG	NA	False	NA	34	True	AATAAA	-24	NA	124736852	124765523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124757172_124758176_124758289_124761069_124761177_124762380_124763872_124763959_124764049_124765169
ES.27205.5	chr5	+	3650	5	NNC	ENSMUSG00000118662.2	novel	2313	2	NA	NA	4081	7	intron_retention	FALSE	non_canonical	0	0	junction_1	22.5097201226492	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGATGGTGATGATG	NA	False	NA	NA	False	ATTAAA	-23	NA	124740935	124765810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124741602_124760413_124761177_124762380_124763872_124763959_124764049_124765169
ES.27205.6	chr5	+	177	1	Intergenic	novelGene_22658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124747542	124747719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124747500_124747700
ES.27205.7	chr5	+	2724	10	ISM	ENSMUSG00000118662.2	ENSMUST00000239505.1	2913	17	12470	283	12427	-283	3prime_fragment	FALSE	canonical	3	33	junction_1	6.45975193499939	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCCTAGTGTTAAGTGA	NA	False	NA	31	True	AATAAA	-21	NA	124749281	124765520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ES.27205.8	chr5	+	1880	11	NNC	ENSMUSG00000118662.2	novel	2913	17	NA	NA	12451	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8865711297128	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGATGGTGGTGATGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	124749305	124765803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124749604_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ES.27205.9	chr5	+	952	1	NIC	ENSMUSG00000118662.2	novel	2913	17	NA	NA	20185	1371	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAAAGATAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	124757039	124757991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124757000_124758000
ES.27206.1	chr5	-	250	1	Intergenic	novelGene_22659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCAGAGGCAGGTGG	NA	False	NA	NA	False	ATTAAA	-38	NA	124749011	124748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124748800_124749000
ES.27207.1	chr5	-	203	1	Intergenic	novelGene_22660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124752835	124752632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124752600_124752800
ES.27208.1	chr5	+	5371	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	-27	1	-27	-1	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTAGTTTTCTTGTGA	NA	False	NA	9	True	AATAAA	-20	NA	124767089	124801518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.10	chr5	+	3106	14	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	11	8952	-2	-2389	5prime_fragment	FALSE	canonical	3	147	junction_7	16.1929928596131	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAAGGCGGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	124767127	124792567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177
ES.27208.12	chr5	+	5428	21	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_14	53.598390834054	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTCTAGTTTTCTT	NA	False	NA	5	True	AATAAA	-16	NA	124767127	124801514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124791373_124791473_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.13	chr5	+	3554	20	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	0	508	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.821676575419	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCAGGTTAGCTGA	NA	False	NA	28	True	AATAAA	-26	NA	124767129	124799711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789242_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.14	chr5	+	3253	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	15	2077	2	239	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACAGCGATGGCTCTCC	NA	False	NA	NA	False	NA	NA	NA	124767131	124799442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.16	chr5	+	2915	20	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	2	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.821676575419	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAAGTTATTTTTTAA	NA	False	NA	NA	False	AATATA	-17	NA	124767131	124799111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782981_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.18	chr5	+	3953	19	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	16	3051	3	-412	5prime_fragment	FALSE	canonical	3	142	junction_14	18.0892847349535	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	124767132	124798468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914
ES.27208.19	chr5	+	5567	19	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	3	-5	intron_retention	FALSE	canonical	3	142	junction_13	18.3363633859668	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTCTAGTTTTCTT	NA	False	NA	5	True	AATAAA	-16	NA	124767132	124801514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.2	chr5	+	5644	19	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	-6	74	intron_retention	FALSE	canonical	1	2	junction_13	42.2697101369495	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTCACATGTTCCT	NA	False	NA	NA	False	AATATA	-34	NA	124767110	124800739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791473_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.20	chr5	+	4332	11	NIC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	3	-2397	intron_retention	FALSE	canonical	3	147	junction_8	17.0132301459776	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATTTGTTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	124767132	124792559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124783979_124784543_124784757_124789272_124789424_124789764_124790523_124791177
ES.27208.23	chr5	+	5588	21	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	5	-6	intron_retention	FALSE	canonical	0	0	junction_5	53.7831525665798	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGTGTCTAGTTTTCT	NA	False	NA	4	True	AATAAA	-15	NA	124767134	124801513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779041_124779309_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.24	chr5	+	5139	20	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	5	-5	intron_retention	FALSE	canonical	1	1	junction_14	41.5059318925797	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGTCTAGTTTTCTT	NA	False	NA	5	True	AATAAA	-16	NA	124767134	124801514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793551_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.25	chr5	+	3050	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	18	2277	5	39	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGTCAGATAATATTT	NA	False	NA	NA	False	AAAAAG	-25	NA	124767134	124799242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.26	chr5	+	4547	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	19	779	6	75	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGTCACATGTTCCTC	NA	False	NA	NA	False	AATATA	-35	NA	124767135	124800740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.28	chr5	+	5254	19	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	42.9431148277708	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTAGTTTTCTTGTG	NA	False	NA	8	True	AATAAA	-19	NA	124767136	124801517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779539_124783874_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.29	chr5	+	3384	12	NIC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	8	-2443	intron_retention	FALSE	canonical	3	147	junction_7	17.463539349501	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	124767137	124792513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124790523_124791177
ES.27208.31	chr5	+	4897	10	NIC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	9	-2391	intron_retention	FALSE	canonical	3	147	junction_7	17.3873801262387	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGAAGGCGGCAGG	NA	False	NA	NA	False	NA	NA	NA	124767138	124792565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124784757_124789272_124789424_124789764_124790523_124791177
ES.27208.33	chr5	+	3154	19	NNC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	11	-92	intron_retention	FALSE	canonical	1	3	junction_9	42.3346456489507	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAAGTTATTTTTTAA	NA	False	NA	NA	False	AATATA	-17	NA	124767140	124799111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789274_124789424_124789764_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.34	chr5	+	5304	20	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	11	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	40.9525771277853	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTCTAGTTTTC	NA	False	NA	3	True	AATAAA	-14	NA	124767140	124801512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770887_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.35	chr5	+	5876	19	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	12	-9	intron_retention	FALSE	canonical	3	142	junction_13	18.1114519395333	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTCTAGTTT	NA	False	NA	1	True	AATAAA	-12	NA	124767141	124801510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.36	chr5	+	5222	19	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	12	0	intron_retention	FALSE	canonical	1	2	junction_2	41.649663197251	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGTTTTCTTGTGAT	NA	False	NA	10	True	AATAAA	-21	NA	124767141	124801519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.37	chr5	+	3281	13	NIC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	12	-2443	intron_retention	FALSE	canonical	3	147	junction_7	16.8465294810402	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	124767141	124792513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124790333_124790431_124790523_124791177
ES.27208.39	chr5	+	3113	14	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	13	-2397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.349012598816	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATTTGTTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	124767142	124792559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789242_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177
ES.27208.4	chr5	+	3609	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	-5	1741	-5	575	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCCTCAGCTTTGAGT	NA	False	NA	95	True	NA	NA	NA	124767111	124799778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.40	chr5	+	4546	11	NIC	ENSMUSG00000038023.13	novel	3526	20	NA	NA	13	-2397	intron_retention	FALSE	canonical	3	147	junction_7	17.4974283824795	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATTTGTTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	124767142	124792559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124784757_124789272_124789424_124789764_124790333_124790431
ES.27208.42	chr5	+	9262	21	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	18	-9	intron_retention	TRUE	non_canonical	0	0	junction_9	63.455417420422	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTCTAGTTT	NA	False	NA	1	True	AATAAA	-12	NA	124767147	124801510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784879_124785038_124786918_124787310_124789424_124789764_124789902_124790144_124790333_124790437_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.44	chr5	+	3592	21	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	19	510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.598390834054	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTCAGGTTAGCTGAAA	NA	False	NA	30	True	AATAAA	-28	NA	124767148	124799713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124791387_124791473_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.46	chr5	+	3125	17	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	8302	1809	8185	507	3prime_fragment	FALSE	canonical	3	142	junction_11	17.3997126413053	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTTCAGGTTAGCTG	NA	False	NA	27	True	AATAAA	-25	NA	124775418	124799710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.48	chr5	+	2985	16	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	10014	1808	9897	508	3prime_fragment	FALSE	canonical	3	142	junction_10	16.5225771463036	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCAGGTTAGCTGA	NA	False	NA	28	True	AATAAA	-26	NA	124777130	124799711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.49	chr5	+	3254	1	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	-1900	-2397	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATTTGTTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	124789305	124792559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124789300_124792600
ES.27208.5	chr5	+	2938	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	-1	2408	-1	-92	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAAGTTATTTTTTAA	NA	False	NA	NA	False	AATATA	-17	NA	124767115	124799111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.50	chr5	+	4577	7	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	-1014	-381	intron_retention	FALSE	canonical	3	153	junction_2	17.5562587763516	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTTTAGCCTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	124790191	124798499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124790333_124790431_124790523_124791177_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914
ES.27208.51	chr5	+	1910	7	ISM	ENSMUSG00000038023.13	ENSMUST00000198382.5	3526	20	23948	-508	-128	508	3prime_fragment	FALSE	canonical	3	142	junction_1	19.5163748910726	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCAGGTTAGCTGA	NA	False	NA	28	True	AATAAA	-26	NA	124791077	124799711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.52	chr5	+	3711	7	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	23961	7	-128	-7	3prime_fragment	FALSE	canonical	3	142	junction_1	19.5163748910726	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTCTAGTTTTC	NA	False	NA	3	True	AATAAA	-14	NA	124791077	124801512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.53	chr5	+	1310	7	ISM	ENSMUSG00000038023.13	ENSMUST00000198382.5	3526	20	23948	92	-128	-92	3prime_fragment	FALSE	canonical	3	142	junction_1	19.5163748910726	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAAGTTATTTTTTAA	NA	False	NA	NA	False	AATATA	-17	NA	124791077	124799111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.54	chr5	+	2398	2	NIC	ENSMUSG00000038023.13	novel	3245	6	NA	NA	379	508	intron_retention	FALSE	canonical	3	183	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTTCAGGTTAGCTGA	NA	False	NA	28	True	AATAAA	-26	NA	124795638	124799711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124797087_124798761
ES.27208.6	chr5	+	5327	20	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	54.0431242599685	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTCTAGTTTTCTTGT	NA	False	NA	7	True	AATAAA	-18	NA	124767120	124801516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767356_124770817_124770897_124773961_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795504_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.8	chr5	+	3827	19	NIC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	6	-93	intron_retention	FALSE	canonical	3	142	junction_13	17.5277557668465	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAAGTTATTTTTTA	NA	False	NA	NA	False	AATATA	-16	NA	124767122	124799110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27208.9	chr5	+	5254	21	NNC	ENSMUSG00000038023.13	novel	5345	20	NA	NA	-3	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	53.7851977778273	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTCTAGTTTTC	NA	False	NA	3	True	AATAAA	-14	NA	124767126	124801512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124767171_124767240_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789276_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ES.27209.1	chr5	-	178	1	Intergenic	novelGene_22661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	124773144	124772966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124773000_124773100
ES.2721.1	chr10	+	3471	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	-488	-2	-488	2	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTGGTCACTGTT	NA	False	NA	10	True	NA	NA	NA	43777314	43823860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.10	chr10	+	2039	6	ISM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	8979	-2	8979	2	3prime_fragment	FALSE	canonical	3	128	junction_5	13.8072444752746	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTGGTCACTGTT	NA	False	NA	10	True	NA	NA	NA	43786781	43823860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.11	chr10	+	2458	3	ISM	ENSMUSG00000019864.15	ENSMUST00000105492.2	2059	6	10589	0	10589	0	3prime_fragment	FALSE	canonical	3	128	junction_2	18.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43807619	43823858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_43808543_43811994_43812088_43822416
ES.2721.2	chr10	+	3193	8	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	-261	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	54.2183792920927	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777541	43823858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.3	chr10	+	2701	7	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	57.5724181647196	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777805	43823858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43822416
ES.2721.4	chr10	+	2040	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	3	938	3	-938	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGTGTTTTAAAAA	NA	False	NA	NA	False	AATGAA	-11	NA	43777805	43822920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.5	chr10	+	3006	9	NNC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.6881636624898	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGGTTTTTGGTCAC	NA	False	NA	6	True	NA	NA	NA	43777805	43823856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43792440_43792496_43804294_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.6	chr10	+	2791	7	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	58.7983843315443	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777806	43823858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43808358_43808543_43811994_43812088_43822416
ES.2721.7	chr10	+	2875	8	NNC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.890198476247	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTGGTTTTTGGTCAC	NA	False	NA	6	True	NA	NA	NA	43777819	43823856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786876_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.2721.8	chr10	+	1964	8	NNC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	20	-938	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.8217077294404	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGTGTTTTAAAAA	NA	False	NA	NA	False	AATGAA	-11	NA	43777822	43822920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786876_43804349_43804460_43808303_43808543_43811994_43812088_43822416
ES.2721.9	chr10	+	2196	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	20	765	20	-765	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGCTTTGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	43777822	43823093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ES.27210.1	chr5	-	2128	3	Antisense	novelGene_ENSMUSG00000038023.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124783902	124776113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_124776215_124778505_124779534_124782903
ES.27211.1	chr5	+	174	1	Intergenic	novelGene_22662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAGCACAGA	6640	False	NA	NA	False	NA	NA	NA	124803013	124803187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124803000_124803200
ES.27212.1	chr5	+	174	1	Intergenic	novelGene_22663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	124809005	124809179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124809000_124809200
ES.27213.1	chr5	-	178	1	Intergenic	novelGene_22664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	124826373	124826195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124826200_124826400
ES.27214.1	chr5	+	4712	23	ISM	ENSMUSG00000038011.16	ENSMUST00000141137.7	13862	78	49705	24758	-11763	4859	intron_retention	TRUE	canonical	0	0	junction_1	2.53935958608426	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCATGAACATTTTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	124851853	124886609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124852310_124852408_124852593_124854222_124854358_124854880_124855034_124856147_124856337_124859331_124859479_124860891_124861084_124862211_124862331_124864380_124864540_124866825_124866962_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718
ES.27214.2	chr5	+	8774	49	ISM	ENSMUSG00000038011.16	ENSMUST00000058440.12	14038	79	49709	1	-11759	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	2.62127712193885	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTGTTTTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	124851857	124911371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124852310_124852408_124852593_124854222_124854358_124854880_124855034_124856147_124856337_124859331_124859479_124860891_124861084_124862211_124862331_124864380_124864540_124866825_124866962_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718_124885923_124886277_124886359_124888512_124888711_124889624_124889787_124890885_124891061_124891613_124891796_124893070_124893208_124894245_124894464_124894623_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
ES.27214.3	chr5	+	8672	49	NNC	ENSMUSG00000038011.16	novel	14038	79	NA	NA	-11758	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.69636779864238	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	124851858	124911372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124852310_124852408_124852593_124854222_124854358_124854880_124855034_124856147_124856337_124859331_124859479_124860891_124861084_124862211_124862331_124864380_124864540_124866825_124866962_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718_124885923_124886277_124886359_124888512_124888711_124889624_124889787_124890885_124891061_124891613_124891796_124893070_124893208_124894245_124894464_124894623_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124904032_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
ES.27214.5	chr5	+	181	1	Intergenic	novelGene_22666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCACTGTCTGTT	2915	False	NA	NA	False	NA	NA	NA	124865637	124865818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124865600_124865800
ES.27214.6	chr5	+	7113	40	NNC	ENSMUSG00000038011.16	novel	6341	27	NA	NA	-649	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.52013587185756	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGTTTGTGTGTTTTGG	5432	False	NA	NA	False	ATTAAA	-16	NA	124868154	124911366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124868365_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718_124885923_124886277_124886359_124888512_124888711_124889624_124889787_124890885_124891061_124891613_124891796_124893070_124893208_124894245_124894464_124894623_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
ES.27214.7	chr5	+	4101	18	ISM	ENSMUSG00000038011.16	ENSMUST00000141137.7	13862	78	92375	3	12122	-3	intron_retention	FALSE	canonical	1	2	junction_12	2.35734881288399	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGGGTTTGTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	124894523	124911364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488
ES.27214.8	chr5	+	3806	17	ISM	ENSMUSG00000038011.16	ENSMUST00000196708.2	6341	27	13218	-183	13218	0	3prime_fragment	FALSE	canonical	1	2	junction_10	2.15058131676066	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	124895619	124911372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
ES.27215.1	chr5	-	178	1	Intergenic	novelGene_22665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAAAATAAAGAG	9028	False	NA	NA	False	NA	NA	NA	124853465	124853287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_124853300_124853500
ES.27216.1	chr5	-	2565	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	-77	-15	-77	15	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTGTGACCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	124939565	124911466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ES.27216.2	chr5	-	2490	4	NIC	ENSMUSG00000037979.14	novel	2473	4	NA	NA	249	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	78.9317567410115	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939239	124911481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124913356_124916006_124916049_124916724_124916872_124938812
ES.27216.3	chr5	-	2594	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	-48	-14	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACTAGAT	NA	False	NA	NA	False	NA	NA	NA	124939536	124911495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
ES.27216.4	chr5	-	1945	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	-33	561	-33	-561	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTCCTCCGAGTCTT	NA	False	NA	-1	True	NA	NA	NA	124939521	124912042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ES.27216.5	chr5	-	2044	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	-46	-562	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTTTCCTCCGAGTCT	NA	False	NA	-2	True	NA	NA	NA	124939534	124912043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
ES.27216.6	chr5	-	1979	5	NNC	ENSMUSG00000037979.14	novel	809	5	NA	NA	-39	-564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	83.3756559194589	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTTTCCTCCGAGT	NA	False	NA	-4	True	NA	NA	NA	124939527	124912045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_124913356_124913543_124913575_124916006_124916049_124916724_124916872_124939078
ES.27216.7	chr5	-	4085	4	NIC	ENSMUSG00000037979.14	novel	2473	4	NA	NA	-261	-571	intron_retention	FALSE	canonical	2	5	junction_1	77.8302997267488	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCCGCCCTCCTTTTCC	NA	False	NA	-11	True	NA	NA	NA	124939208	124912052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_124913356_124913543_124916049_124916724_124916872_124939078
ES.27217.1	chr5	+	4175	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	-78	-5	-78	5	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTGTGTGGTGTATG	NA	False	NA	13	True	NA	NA	NA	124939676	124965699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
ES.27217.10	chr5	+	5933	2	FSM	ENSMUSG00000079215.9	ENSMUST00000134473.2	3884	2	-2050	1	-2050	-1	multi-exon	FALSE	canonical	3	206	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTATGTTTCCTGTGTGG	NA	False	NA	7	True	NA	NA	NA	124959582	124965693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124961837_124962014
ES.27217.2	chr5	+	4222	5	NNC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	7	-2	intron_retention	FALSE	canonical	1	3	junction_2	106.815261081926	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTATGTTTCCTGTGTG	NA	False	NA	6	True	NA	NA	NA	124939761	124965692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124939947_124940417_124940573_124952937_124953077_124961771_124961837_124962014
ES.27217.3	chr5	+	4541	3	NIC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	26	4	intron_retention	FALSE	canonical	3	206	junction_2	10	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCCTGTGTGGTGTAT	NA	False	NA	12	True	NA	NA	NA	124939780	124965698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_124940573_124961771_124961837_124962014
ES.27217.4	chr5	+	4140	5	NNC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	30	-2	intron_retention	FALSE	canonical	1	2	junction_3	107.560157586348	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTATGTTTCCTGTGTG	NA	False	NA	6	True	NA	NA	NA	124939784	124965692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124939947_124940417_124940573_124951741_124951822_124961771_124961837_124962014
ES.27217.5	chr5	+	4274	6	NNC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	34	-3	intron_retention	FALSE	canonical	0	0	junction_3	105.189353073398	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTATGTTTCCTGTGT	NA	False	NA	5	True	NA	NA	NA	124939788	124965691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124939947_124940417_124940573_124951741_124951822_124952937_124953077_124961771_124961837_124962014
ES.27217.6	chr5	+	2850	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	36	1206	36	-1206	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCGGTAGTGATTAAG	NA	False	NA	NA	False	NA	NA	NA	124939790	124964488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
ES.27217.7	chr5	+	3980	4	NNC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	-34	-2	intron_retention	FALSE	canonical	0	0	junction_1	102.15021618512	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTATGTTTCCTGTGTG	NA	False	NA	6	True	NA	NA	NA	124939793	124965692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124939947_124940488_124940573_124961771_124961837_124962014
ES.27217.8	chr5	+	3944	5	NNC	ENSMUSG00000079215.9	novel	4092	4	NA	NA	-12	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	95.8159042121923	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTATGTTTCCTGTGT	NA	False	NA	5	True	NA	NA	NA	124939815	124965691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014_124963132_124963215
ES.27218.1	chr5	+	156	1	Intergenic	novelGene_22667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACACA	NA	False	NA	NA	False	NA	NA	NA	124994159	124994315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_124994200_124994300
ES.27219.1	chr5	+	161	1	Intergenic	novelGene_22668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAAAATCTT	894	False	NA	NA	False	NA	NA	NA	125004347	125004508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125004300_125004500
ES.2722.1	chr10	-	1898	10	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	3	38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28.4205628913596	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCATTCTGCAT	NA	False	NA	NA	False	TATAAA	-44	NA	43777738	43750145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750703_43752467_43752674_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.10	chr10	-	4225	7	NIC	ENSMUSG00000019863.8	novel	2290	8	NA	NA	3	-552	intron_retention	FALSE	canonical	3	75	junction_4	9.49415024575074	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTTTAGAATCTTTG	NA	False	NA	-12	True	ATTAAA	-11	NA	43777738	43757461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.11	chr10	-	728	5	ISM	ENSMUSG00000019863.8	ENSMUST00000154405.2	2290	8	8	7975	8	-211	5prime_fragment	FALSE	canonical	3	75	junction_2	10.2316909648406	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTCTGGTCTCTGTAT	NA	False	NA	NA	False	AATACA	-25	NA	43777733	43764884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.2	chr10	-	6738	10	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	38	0	intron_retention	FALSE	canonical	3	73	junction_1	10.5303793326209	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGGATTTTACTATAAT	NA	False	NA	NA	False	TATAAA	-6	NA	43777703	43750183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750703_43752467_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.3	chr10	-	9687	8	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	73	junction_1	10.0914188642568	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	TATAAA	-4	NA	43777689	43750185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750703_43752467_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.4	chr10	-	1985	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	-6	2	-6	-2	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	TATAAA	-4	NA	43777747	43750185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.5	chr10	-	1879	10	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	28.9217761522779	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	TATAAA	-4	NA	43777738	43750185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43771429_43771529_43772004_43772165_43777609
ES.2722.6	chr10	-	1947	11	NNC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.133432069337	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	TATAAA	-4	NA	43777689	43750185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_43750703_43752467_43752694_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.7	chr10	-	10341	1	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	-7426	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGGATTTTACTATA	NA	False	NA	NA	False	TATAAA	-4	NA	43760526	43750185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750200_43760500
ES.2722.8	chr10	-	7232	9	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	14	-5	intron_retention	FALSE	canonical	3	73	junction_1	9.57535900110278	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGTACTGGATTTTACT	NA	False	NA	NA	False	TATAAA	-1	NA	43777727	43750188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_43750703_43752467_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.2722.9	chr10	-	1273	9	ISM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	-1	7269	-1	-543	5prime_fragment	FALSE	canonical	3	75	junction_6	9.72111104761179	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATCTTTGCTTTTCTTT	NA	False	NA	-3	True	ATTAAA	-20	NA	43777742	43757452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ES.27220.1	chr5	+	176	1	Intergenic	novelGene_22669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCCCCTGTC	NA	False	NA	NA	False	NA	NA	NA	125026604	125026780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125026600_125026800
ES.27221.1	chr5	-	172	1	Intergenic	novelGene_22670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	125063821	125063649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125063600_125063800
ES.27222.1	chr5	+	1663	3	FSM	ENSMUSG00000037962.8	ENSMUST00000197746.2	1649	3	-14	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGCTCTCTGTTTCTGA	8945	False	NA	NA	False	AATAAA	-17	NA	125080524	125089610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125080803_125087435_125087546_125088335
ES.27223.1	chr5	-	6572	39	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-6	1068	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.5675199166069	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATTTATATTTCA	NA	False	NA	NA	False	TTTAAA	-4	NA	125256272	125093148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125093711_125094072_125094195_125094656_125094880_125106252_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.11	chr5	-	11362	44	NNC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	34.5410612280887	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256283	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125106078_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125113191_125113884_125113983_125114125_125114441_125114924_125115062_125115952_125116115_125118859_125119032_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.12	chr5	-	8857	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111402.9	8862	48	-4	9	1	0	multi-exon	FALSE	canonical	3	10	junction_47	24.0857830143284	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256282	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.13	chr5	-	4832	19	NIC	ENSMUSG00000029478.17	novel	7452	43	NA	NA	5953	0	intron_retention	FALSE	canonical	3	13	junction_2	36.4238169944398	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	5665	False	NA	-7	True	AATATA	-10	NA	125113923	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884
ES.27223.14	chr5	-	8798	49	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	28.1460723527971	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256269	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105777_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183371_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.15	chr5	-	4561	21	NNC	ENSMUSG00000029478.17	novel	8575	47	NA	NA	-28515	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.6510336742958	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125163990	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109281_125145992_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904
ES.27223.16	chr5	-	9145	50	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_25	34.6727666863726	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256289	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125094487_125094656_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125116258_125116427_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146191_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.18	chr5	-	5050	22	NNC	ENSMUSG00000029478.17	novel	7452	43	NA	NA	5936	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.597248295526	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	5648	False	NA	-8	True	AATATA	-9	NA	125113940	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100153_125100211_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884
ES.27223.19	chr5	-	8885	50	NNC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.1345247437838	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	-8	True	AATATA	-9	NA	125256223	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096332_125096448_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125156483_125156562_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.20	chr5	-	8797	49	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.371158141203	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	-8	True	AATATA	-9	NA	125256270	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106075_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125118951_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.25	chr5	-	8850	49	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_43	29.0235775802287	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	-8	True	AATATA	-9	NA	125256245	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107288_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119032_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183371_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.27	chr5	-	8980	50	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	27.6983663815801	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	-8	True	AATATA	-9	NA	125256278	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125204431_125204523_125230670_125230717_125256060
ES.27223.3	chr5	-	8843	48	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_47	23.1560924482947	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGCTTCTCACTGG	NA	False	NA	0	True	AATATA	-17	NA	125256270	125094218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.30	chr5	-	8959	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	26.7947121130685	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTTTCTACTCTGCTT	NA	False	NA	-8	True	AATATA	-9	NA	125256282	125094226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.31	chr5	-	8560	47	NNC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.9610886476664	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125256280	125094227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102483_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107288_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.32	chr5	-	8886	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	65	junction_46	20.0123225927316	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125256276	125094227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.33	chr5	-	7908	42	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	22200	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	32.5479922959699	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125179764	125094227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125105777_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146139_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706
ES.27223.35	chr5	-	7440	39	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-29497	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	28.6378306835624	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125164972	125094227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125097023_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119032_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857
ES.27223.36	chr5	-	8763	48	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	25.1174515810194	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACGTTTCTACTCTGCT	NA	False	NA	-9	True	AATATA	-8	NA	125256267	125094227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.37	chr5	-	8887	48	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_30	30.6005234039213	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256270	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107288_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146139_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.4	chr5	-	8640	48	NNC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	32.8068824277933	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGCTTCTCACTGG	NA	False	NA	0	True	AATATA	-17	NA	125256258	125094218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125118951_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146139_125156071_125156171_125158193_125158249_125161944_125162124_125164925_125165031_125168717_125168785_125175010_125175064_125179706_125179761_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.40	chr5	-	8844	48	NNC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_46	30.5983634543451	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256275	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107288_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.43	chr5	-	8918	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	23.8532750925086	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256249	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.44	chr5	-	8700	47	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	29.6598310271577	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256282	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146139_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125256060
ES.27223.45	chr5	-	7211	37	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-28500	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	24.3778132279698	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125163975	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904
ES.27223.47	chr5	-	9062	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_30	26.3624492913479	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256270	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.5	chr5	-	9015	49	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	22.2506144578077	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTCTGCTTCTCACTG	NA	False	NA	-1	True	AATATA	-16	NA	125256283	125094219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.51	chr5	-	8832	48	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	26.3606975234885	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256271	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125164925_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.53	chr5	-	3828	17	NNC	ENSMUSG00000029478.17	novel	7452	43	NA	NA	-5	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	44.4697931184754	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAACGTTTCTACTCTGC	NA	False	NA	-10	True	AATATA	-7	NA	125256249	125094228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105777_125105945_125106078_125106183_125106334_125107035_125107237_125201877_125202045_125230670_125230717_125256060
ES.27223.54	chr5	-	8795	47	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-115	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	29.6989303684216	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256398	125094229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107288_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125164925_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.55	chr5	-	8687	48	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.258964660612	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256271	125094229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095258_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.57	chr5	-	9875	48	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	65	junction_45	20.2234686110429	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256270	125094229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.58	chr5	-	8570	47	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	27.7439088837754	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256288	125094229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125118951_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125256060
ES.27223.6	chr5	-	8714	48	NIC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_46	26.7885437294961	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTCTACTCTGCTTCT	NA	False	NA	-6	True	AATATA	-11	NA	125256252	125094224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.62	chr5	-	9585	48	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.7998694828886	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAACGTTTCTACTCTG	NA	False	NA	-11	True	AATATA	-6	NA	125256268	125094229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125100211_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103341_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.64	chr5	-	8785	48	NIC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_46	25.348829376264	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAACGTTTCTACTCT	NA	False	NA	-12	True	AATATA	-5	NA	125256275	125094230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.66	chr5	-	9011	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	25.4088444247274	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACAACGTTTCTACTC	NA	False	NA	-13	True	AATATA	-4	NA	125256285	125094231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103751_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.67	chr5	-	8814	49	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	41	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	25.2978095230924	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGACAACGTTTCTACT	NA	False	NA	-14	True	AATATA	-3	NA	125256203	125094232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105777_125105862_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.68	chr5	-	8596	47	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-4	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_46	23.721963852053	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGACAACGTTTCTACT	NA	False	NA	-14	True	AATATA	-3	NA	125256248	125094232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125256060
ES.27223.69	chr5	-	8838	48	NNC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	27.1762351911931	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTGACAACGTTTCTAC	NA	False	NA	-15	True	AATATA	-2	NA	125256283	125094233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105777_125105862_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.7	chr5	-	8646	48	NIC	ENSMUSG00000029478.17	novel	8661	48	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_46	25.7689177279367	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256248	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ES.27223.71	chr5	-	3564	21	ISM	ENSMUSG00000029478.17	ENSMUST00000111402.9	8862	48	-11	30362	-6	287	5prime_fragment	FALSE	canonical	3	10	junction_20	22.6375793758962	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTGTCACTCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	125256289	125124578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ES.27223.72	chr5	-	3660	22	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	283	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	23.1320766582151	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAATAGTGTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	125256283	125124582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.73	chr5	-	3370	22	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	23.1320766582151	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTGTCTTAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	125256271	125124860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.74	chr5	-	3318	22	ISM	ENSMUSG00000029478.17	ENSMUST00000111398.8	8808	48	4	30644	-1	5	5prime_fragment	FALSE	canonical	3	65	junction_19	15.2093478834087	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTGTCTTAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	125256279	125124860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.75	chr5	-	3315	22	NNC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	23.2036239252688	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGTGTCTTAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	125256282	125124860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183371_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.76	chr5	-	3367	22	NNC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	28.6022056457269	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCAGGGTGTCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	125256278	125124864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125125599_125126405_125126460_125127974_125128183_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183371_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27223.8	chr5	-	8892	49	NIC	ENSMUSG00000029478.17	novel	8862	48	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	21.0932844598833	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256271	125094225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ES.27224.1	chr5	+	187	1	Intergenic	novelGene_22671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	6208	False	NA	NA	False	NA	NA	NA	125273451	125273638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125273500_125273600
ES.27225.1	chr5	-	174	1	Intergenic	novelGene_22672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	8772	False	NA	NA	False	NA	NA	NA	125291763	125291589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125291600_125291800
ES.27226.1	chr5	+	181	1	Intergenic	novelGene_22677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACGTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	125352160	125352341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125352200_125352300
ES.27227.1	chr5	+	178	1	Intergenic	novelGene_22679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAAACATTTC	NA	False	NA	NA	False	NA	NA	NA	125367620	125367798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125367600_125367800
ES.27228.1	chr5	+	162	1	Intergenic	novelGene_22680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAGTAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	125412254	125412416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125412300_125412400
ES.27229.1	chr5	-	207	1	Intergenic	novelGene_22673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCAGAAGCCTTTTGTG	8565	False	NA	NA	False	NA	NA	NA	125295915	125295708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125295700_125295900
ES.27229.11	chr5	-	2831	13	NNC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	209.270492160001	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTGGCTTCTGTGACT	NA	False	NA	-4	True	AATAAA	-18	NA	125418147	125354153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125358168_125358622_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.12	chr5	-	2375	12	NIC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	185.470320184717	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418127	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125354930_125360962_125361129_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.14	chr5	-	2513	13	NNC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.562424404334	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418149	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354936_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.15	chr5	-	2332	12	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	188.346612077286	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418127	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377595_125380159_125380288_125381258_125381417_125417820
ES.27229.16	chr5	-	2920	1	NIC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	4148	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125357075	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125354200_125357100
ES.27229.17	chr5	-	1098	5	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	-1000	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.727231620868	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125364741	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125364690
ES.27229.19	chr5	-	2371	13	NNC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	228.580568703661	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418168	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417975
ES.27229.2	chr5	-	208	2	Intergenic	novelGene_22674	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCAGAAGCCTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	125357952	125295708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125295771_125357806
ES.27229.20	chr5	-	2252	11	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.468662513758	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418147	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125371066_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.21	chr5	-	2537	13	NNC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	238.088379365497	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125404776	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125403223_125403493_125404557
ES.27229.24	chr5	-	2265	12	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	189.341005936183	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACACTGGCTTCTGTGA	NA	False	NA	-6	True	AATAAA	-16	NA	125418138	125354155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366785_125371128_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.25	chr5	-	1116	4	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	-544	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.878518616947	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAACACTGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	125364285	125354157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364140
ES.27229.26	chr5	-	2342	12	NNC	ENSMUSG00000037936.16	novel	2367	12	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	185.61664039111	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAACACTGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	125418123	125354157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125354930_125360962_125361110_125361744_125361789_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.27	chr5	-	182	1	Intergenic	novelGene_22678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGATG	NA	False	NA	NA	False	NA	NA	NA	125357953	125357771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125357800_125358000
ES.27229.28	chr5	-	2110	9	ISM	ENSMUSG00000037936.16	ENSMUST00000148373.8	2082	11	-75	3308	0	-3308	5prime_fragment	FALSE	canonical	3	583	junction_5	35.6019662378358	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGGACCCACATGCT	NA	False	NA	NA	False	NA	NA	NA	125418158	125363726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.3	chr5	-	157	1	Intergenic	novelGene_22675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	6252	False	NA	NA	False	NA	NA	NA	125298228	125298071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125298100_125298200
ES.27229.4	chr5	-	144	1	Intergenic	novelGene_22676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125328917	125328773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125328800_125328900
ES.27229.5	chr5	-	2412	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	-42	-3	-19	1	multi-exon	TRUE	canonical	3	487	junction_1	58.8981471316135	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTTCTGTGACTGTTT	NA	False	NA	0	True	AATAAA	-22	NA	125418177	125354149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.6	chr5	-	2550	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	-29	0	-29	0	multi-exon	FALSE	canonical	3	188	junction_1	171.680966232913	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418187	125354150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.7	chr5	-	4596	11	NIC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	487	junction_1	60.7405136626288	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418158	125354150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.27229.8	chr5	-	4694	12	NIC	ENSMUSG00000037936.16	novel	2521	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	188	junction_1	179.109459122369	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418127	125354150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ES.2723.1	chr10	-	3715	19	ISM	ENSMUSG00000019866.16	ENSMUST00000020017.14	6608	20	6974	-1	6974	1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.590563656263036	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATGAAATCGTGGGCT	NA	False	NA	NA	False	ATTAAA	-18	NA	43873391	43826632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_43827954_43832644_43832808_43834243_43834403_43834809_43834934_43837424_43837565_43840573_43840704_43842296_43842410_43843460_43843494_43843684_43843812_43849653_43849800_43849889_43850017_43851022_43851181_43852793_43852830_43855476_43855604_43862246_43862387_43865089_43865250_43868450_43868570_43868653_43868702_43873047
ES.27230.1	chr5	-	271	1	Intergenic	novelGene_22681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	5011	False	NA	NA	False	NA	NA	NA	125429081	125428810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125428800_125429100
ES.27231.1	chr5	-	175	1	Intergenic	novelGene_22682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATTAATTAATTAA	NA	False	NA	NA	False	NA	NA	NA	125439388	125439213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125439200_125439400
ES.27232.1	chr5	-	217	1	Intergenic	novelGene_22683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGTGCTGTTTTGG	NA	False	NA	2	True	TTTAAA	-15	NA	125443062	125442845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125442800_125443100
ES.27233.1	chr5	-	154	1	Intergenic	novelGene_22684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	125443988	125443834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125443800_125444000
ES.27234.1	chr5	+	180	1	Intergenic	novelGene_22685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAGAATG	2414	False	NA	NA	False	NA	NA	NA	125444531	125444711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125444500_125444700
ES.27235.1	chr5	+	3178	3	Intergenic	novelGene_22688	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9031	False	NA	14	True	NA	NA	NA	125451148	125456621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125453533_125454592_125454786_125456020
ES.27235.2	chr5	+	3169	3	Intergenic	novelGene_22689	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAATGCTGTCATTTC	9031	False	NA	16	True	NA	NA	NA	125451148	125456623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125453533_125454603_125454786_125456020
ES.27235.3	chr5	+	1675	5	Intergenic	novelGene_22686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	8.01171017948103	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTAGAATGCTGTCAT	9031	False	NA	13	True	NA	NA	NA	125451148	125456620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125451412_125451765_125452329_125453880_125453948_125454603_125454786_125456020
ES.27235.4	chr5	+	4237	2	Intergenic	novelGene_22687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTAGAATGCTGTCAT	9031	False	NA	13	True	NA	NA	NA	125451148	125456620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125454786_125456020
ES.27235.5	chr5	+	1318	4	Intergenic	novelGene_22690	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	8.9938250421547	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9040	False	NA	14	True	NA	NA	NA	125451157	125456621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125451538_125451765_125451921_125454603_125454786_125456020
ES.27235.6	chr5	+	1703	4	Intergenic	novelGene_22691	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	8.37987005998436	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGAATGCTGTCATT	9063	False	NA	14	True	NA	NA	NA	125451180	125456621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125451538_125451765_125452329_125454603_125454786_125456020
ES.27235.7	chr5	+	972	1	Intergenic	novelGene_22692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTCTCCATTTCT	9092	False	NA	NA	False	NA	NA	NA	125451209	125452181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125451200_125452200
ES.27235.8	chr5	+	4443	2	Intergenic	novelGene_22693	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTGCTGAGAAGAGGA	9190	False	NA	NA	False	NA	NA	NA	125451307	125456985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125454786_125456020
ES.27235.9	chr5	+	162	1	Intergenic	novelGene_22694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	378	False	NA	NA	False	NA	NA	NA	125454763	125454925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125454800_125454900
ES.27236.1	chr5	-	2297	1	ISM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	1752	1	924	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1198	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTTGTTGGTTGGTT	NA	False	NA	-1	True	AATAAA	-25	NA	125465326	125463029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125463000_125465300
ES.27236.2	chr5	-	1436	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	-12	True	AATAAA	-14	NA	125466816	125463040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125464421_125466760
ES.27236.3	chr5	-	1657	2	NNC	ENSMUSG00000008348.10	novel	2581	2	NA	NA	1097	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	-12	True	AATAAA	-14	NA	125465153	125463040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125463246_125463701
ES.27236.4	chr5	-	520	3	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	262	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	458	1198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	-12	True	AATAAA	-14	NA	125466816	125463040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125463246_125465069_125465329_125466760
ES.27237.1	chr5	-	171	1	Intergenic	novelGene_22695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCTGAATAATTTGA	NA	False	NA	NA	False	NA	NA	NA	125468143	125467972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125468000_125468100
ES.27238.1	chr5	-	472	1	Intergenic	novelGene_22696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATATTAAAAAA	NA	False	NA	NA	False	ATTAAA	-35	NA	125470127	125469655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125469700_125470100
ES.27239.1	chr5	-	6135	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	33	-1408	33	1408	multi-exon	TRUE	canonical	3	122	junction_21	17.4191708985502	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGGGTGATGGCAGC	NA	False	NA	NA	False	AATAAA	-14	NA	125511152	125489513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.12	chr5	-	4146	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-30	384	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.8969683497005	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511215	125491467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.14	chr5	-	4023	26	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	8	384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	52.1015009380728	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511177	125491467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506260_125506372_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.15	chr5	-	5434	25	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	32	384	intron_retention	FALSE	canonical	3	122	junction_19	17.4839211849059	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511153	125491467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.16	chr5	-	4198	27	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	49	384	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	34.1187666348945	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511136	125491467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492496_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.17	chr5	-	4410	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-15	384	intron_retention	FALSE	canonical	3	122	junction_20	17.2263054657695	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511200	125491467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.18	chr5	-	4154	27	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	24	383	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	33.6032586824974	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511161	125491468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506260_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.19	chr5	-	6789	21	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	22	383	intron_retention	FALSE	canonical	3	122	junction_15	17.8052660749566	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511163	125491468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125493502_125493595_125494659_125495513_125495848_125496024_125496214_125496297_125496405_125498071_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.2	chr5	-	4069	28	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	33	1401	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.6908400360092	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAACCCAGGGGTGA	NA	False	NA	NA	False	AATAAA	-7	NA	125511152	125489520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125489590_125491648_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.20	chr5	-	4209	27	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	48	382	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	43.6459159181173	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125511137	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495502_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500670_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.21	chr5	-	5887	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-8	382	intron_retention	FALSE	canonical	3	122	junction_20	17.253590930586	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125511193	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.23	chr5	-	6204	17	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	116	382	intron_retention	FALSE	canonical	3	125	junction_10	14.5666571319572	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125503680	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125498184_125499182_125499416_125499668_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735
ES.27239.26	chr5	-	3714	25	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-60	382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.3793936586051	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125511245	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504578_125507068_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.27	chr5	-	4969	25	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	0	382	intron_retention	FALSE	canonical	3	122	junction_20	17.8869423975517	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125511185	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125508831_125510998
ES.27239.28	chr5	-	4025	10	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-2432	382	intron_retention	FALSE	canonical	3	125	junction_9	16.4931710522272	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGGCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125498345	125491469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495848_125496024_125496214_125496297
ES.27239.29	chr5	-	4343	14	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	2386	381	intron_retention	FALSE	canonical	2	5	junction_7	42.8447037456586	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTGGCTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125501410	125491470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495502_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125499416_125499668_125499746_125500490
ES.27239.3	chr5	-	4846	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	24	-110	24	110	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGTGTTCTCTGTGTCT	NA	False	NA	NA	False	ACTAAA	-14	NA	125511161	125490811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.31	chr5	-	4137	27	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	53	380	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	34.234744799389	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCCTGGCTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511132	125491471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502505_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.32	chr5	-	3480	25	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	48	256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.3793936586051	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACAGGGTTTCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	125511137	125491595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504578_125507068_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.33	chr5	-	4045	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	-9	724	-9	206	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTTCTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	125511194	125491645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.34	chr5	-	4068	27	NNC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	-1	204	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	34.1187666348945	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGTCTTCTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	125511186	125491647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_125492231_125492364_125492496_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.35	chr5	-	3812	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	27	921	27	9	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACTTCTGTGACCCAGT	NA	False	NA	NA	False	NA	NA	NA	125511158	125491842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.36	chr5	-	3403	16	ISM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	-30	5997	-30	-3555	5prime_fragment	FALSE	canonical	3	122	junction_10	17.7668855521226	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAAAAAGACTGTAC	NA	False	NA	NA	False	NA	NA	NA	125511215	125496918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.37	chr5	-	4677	14	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	42	3256	intron_retention	FALSE	canonical	3	122	junction_8	18.9061838291668	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTCAGAATAAAGACTG	NA	False	NA	NA	False	AAGAAA	-12	NA	125511143	125497370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125498184_125499182_125499416_125499668_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.38	chr5	-	2894	16	ISM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	24	6452	24	3253	5prime_fragment	FALSE	canonical	3	122	junction_10	17.7668855521226	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCCTTCAGAATAAAGA	NA	False	NA	NA	False	AAGAAA	-9	NA	125511161	125497373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.39	chr5	-	2782	10	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	0	-835	intron_retention	FALSE	canonical	3	122	junction_5	20.4039453943182	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGAGTGTGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	125511185	125501461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125508831_125510998
ES.27239.4	chr5	-	4768	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	-1	-7	-1	7	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCTTGATCATGTCCT	NA	False	NA	NA	False	AGTAAA	-23	NA	125511186	125490914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.5	chr5	-	4646	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	12	102	12	-102	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGCAGTTCTTTTGT	NA	False	NA	NA	False	AATAGA	-31	NA	125511173	125491023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.6	chr5	-	4426	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	5	329	5	-329	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCTTGTCTGTCACAT	NA	False	NA	-5	True	AGTAAA	-22	NA	125511180	125491250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.8	chr5	-	4275	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	-60	545	-60	385	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125511245	125491466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.27239.9	chr5	-	4108	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	11	385	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	34.6997636879561	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125511174	125491466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ES.2724.1	chr10	+	175	1	Intergenic	novelGene_2074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44005428	44005603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_44005400_44005600
ES.27240.1	chr5	+	1304	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	-58	5227	-58	417	multi-exon	FALSE	canonical	3	373	junction_1	23.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGGGTGAGCACCGTG	NA	False	NA	77	True	NA	NA	NA	125518573	125532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125518957_125528733_125528837_125531389
ES.27240.10	chr5	+	4778	2	NNC	ENSMUSG00000037905.14	novel	6473	3	NA	NA	13517	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGACTCCTGGATGG	527	False	NA	23	True	AATAAA	-15	NA	125532330	125537427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125534254_125534572
ES.27240.11	chr5	+	4004	2	NNC	ENSMUSG00000037905.14	novel	6473	3	NA	NA	14292	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGACTCCTGGATGG	563	False	NA	23	True	AATAAA	-15	NA	125533105	125537427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125534260_125534577
ES.27240.12	chr5	+	3693	1	Genic_Genomic	ENSMUSG00000037905.14	novel	NA	NA	NA	NA	15468	540	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATATGTGATGGCA	1739	False	NA	NA	False	NA	NA	NA	125534281	125537974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_125534300_125538000
ES.27240.2	chr5	+	6487	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	-13	-1	-13	1	multi-exon	FALSE	canonical	3	373	junction_1	23.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGATGGATTTCTTT	NA	False	NA	31	True	AATAAA	-23	NA	125518618	125537435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125518957_125528733_125528837_125531389
ES.27240.3	chr5	+	1320	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-190	-385	-8	385	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGACGTCCTTAAGG	NA	False	NA	45	True	AATAAA	-37	NA	125518623	125532175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
ES.27240.4	chr5	+	1117	4	NNC	ENSMUSG00000037905.14	novel	6473	3	NA	NA	0	368	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.894178255267	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGCTTTGAAGGGAAC	NA	False	NA	28	True	AATAAA	-20	NA	125518631	125532158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125518803_125518882_125518957_125528733_125528837_125531389
ES.27240.5	chr5	+	3472	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-158	-2569	24	2569	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATCAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125518655	125534359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
ES.27240.7	chr5	+	878	4	NNC	ENSMUSG00000037905.14	novel	745	4	NA	NA	-91	367	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	186.956322884963	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAGCTTTGAAGGGAA	NA	False	NA	27	True	AATAAA	-19	NA	125518722	125532157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125518957_125528733_125528837_125531389_125531554_125531780
ES.27240.8	chr5	+	4177	4	NNC	ENSMUSG00000037905.14	novel	745	4	NA	NA	-87	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	187.894178255267	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGACTCCTGGATGG	NA	False	NA	23	True	AATAAA	-15	NA	125518726	125537427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125518957_125528733_125528837_125531389_125532383_125534576
ES.27240.9	chr5	+	852	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	118	5503	-64	141	multi-exon	FALSE	canonical	3	373	junction_1	23.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGTATTTCCCACTG	NA	False	NA	10	True	AATAAA	-16	NA	125518749	125531931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125518957_125528733_125528837_125531389
ES.27241.1	chr5	-	1658	1	Antisense	novelGene_ENSMUSG00000037905.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACCCATATACATAAAATA	NA	False	NA	NA	False	NA	NA	NA	125536907	125535249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_125535200_125536900
ES.27242.1	chr5	-	170	1	Intergenic	novelGene_22697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	125541668	125541498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125541500_125541700
ES.27243.1	chr5	+	3584	20	NNC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	-9794	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.4549036321572	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCGTGTGTTTCTCTGA	NA	False	NA	13	True	AATAAA	-30	NA	125543083	125594477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125543184_125552544_125552719_125552809_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.10	chr5	+	4810	16	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	62	-5	intron_retention	FALSE	canonical	0	0	junction_4	30.0831440437258	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCAGTACGCGTGTGT	NA	False	NA	5	True	AATAAA	-22	NA	125552939	125594469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.11	chr5	+	3211	18	NNC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	71	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.5961528214586	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGCAGTACGCGTGTG	NA	False	NA	4	True	AATAAA	-21	NA	125552948	125594468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585871_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.12	chr5	+	7982	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	73	-4816	73	4816	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTAGCCTGGTCACTAT	NA	False	NA	NA	False	NA	NA	NA	125552950	125599290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.13	chr5	+	3947	12	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	-11224	-87	intron_retention	FALSE	canonical	3	101	junction_2	13.20530822394	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATCCTGGATCTTAAG	NA	False	NA	-77	True	CATAAA	-9	NA	125571988	125594387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125590292_125590982_125591053_125591232_125591292_125591991
ES.27243.14	chr5	+	3191	14	NNC	ENSMUSG00000029482.5	novel	796	5	NA	NA	-10705	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.7673908733046	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCAGTACGCGTGT	NA	False	NA	3	True	AATAAA	-20	NA	125572507	125594467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125573200_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.15	chr5	+	2347	12	NNC	ENSMUSG00000029482.5	novel	796	5	NA	NA	-2020	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5920101471834	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCAGTACGCGTGT	NA	False	NA	3	True	AATAAA	-20	NA	125581192	125594467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125581238_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.2	chr5	+	134	1	FSM	ENSMUSG00000104793.2	ENSMUST00000199788.2	2838	1	196	2508	196	-2508	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	125548756	125548890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125548800_125548900
ES.27243.3	chr5	+	3149	17	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	-17	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.9100888667438	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCAGTACGCGT	NA	False	NA	1	True	AATAAA	-18	NA	125552860	125594465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.4	chr5	+	3235	18	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	15	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	30.5276549420845	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCAGTACGCGTGT	NA	False	NA	3	True	AATAAA	-20	NA	125552892	125594467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590147_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.5	chr5	+	3323	17	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	50	-7	intron_retention	FALSE	canonical	3	83	junction_4	15.0134054681142	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCAGTACGCGTGT	NA	False	NA	3	True	AATAAA	-20	NA	125552927	125594467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.6	chr5	+	3541	17	NNC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	56	-6	intron_retention	FALSE	non_canonical	0	0	junction_13	31.4573123454627	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGCAGTACGCGTGTG	NA	False	NA	4	True	AATAAA	-21	NA	125552933	125594468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125590292_125590981_125591053_125591232_125591292_125591991_125592195_125593279
ES.27243.8	chr5	+	4533	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	61	-1355	61	1355	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTTTTACCCCGAAT	NA	False	NA	NA	False	NA	NA	NA	125552938	125595829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ES.27244.1	chr5	-	168	1	Intergenic	novelGene_22698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	125547430	125547262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125547300_125547400
ES.27245.1	chr5	-	179	1	Intergenic	novelGene_22699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125561426	125561247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125561200_125561400
ES.27246.1	chr5	-	176	1	Intergenic	novelGene_22700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTATTTTTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	125569434	125569258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125569300_125569400
ES.27247.1	chr5	-	210	1	Intergenic	novelGene_22701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCCATACACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	125655246	125655036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_125655000_125655200
ES.27248.1	chr5	+	206	1	Intergenic	novelGene_22702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAACAAATATATTC	NA	False	NA	NA	False	NA	NA	NA	125677883	125678089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_125677900_125678100
ES.27249.1	chr5	+	3487	1	ISM	ENSMUSG00000070498.4	ENSMUST00000031446.7	7995	9	256710	0	166609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGTCTTATTTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	125866160	125869647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_125866200_125869600
ES.2725.1	chr10	-	3792	1	Intergenic	novelGene_2075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGTGTCTGGTC	4714	False	NA	NA	False	NA	NA	NA	44144251	44140459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44140500_44144300
ES.27250.1	chr5	+	176	1	Intergenic	novelGene_22703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGTTCATTC	NA	False	NA	NA	False	NA	NA	NA	126071835	126072011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_126071800_126072000
ES.27251.1	chr5	-	176	1	Intergenic	novelGene_22704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAACCC	NA	False	NA	NA	False	NA	NA	NA	127123436	127123260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127123300_127123400
ES.27252.1	chr5	+	3908	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	-29	1255	-29	52	multi-exon	TRUE	canonical	0	0	junction_2	1.8328597873269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGGCCTACATTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	127318842	127641602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
ES.27252.2	chr5	+	5109	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	20	5	2	-5	multi-exon	FALSE	canonical	0	0	junction_2	1.8328597873269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTCAGTGTCTCGTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	127318891	127642852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
ES.27253.1	chr5	-	1593	1	Intergenic	novelGene_22705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	127323806	127322213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127322200_127323800
ES.27254.1	chr5	+	170	1	Intergenic	novelGene_22706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACCTGAGG	1571	False	NA	NA	False	NA	NA	NA	127659068	127659238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_127659100_127659200
ES.27255.1	chr5	+	4223	1	FSM	ENSMUSG00000105362.2	ENSMUST00000196415.2	774	1	-2884	-565	-2884	565	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127691171	127695394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127691200_127695400
ES.27256.1	chr5	+	4158	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-743	-2	-743	2	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	7958	False	NA	NA	False	NA	NA	NA	127708582	127786440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.10	chr5	+	1419	8	ISM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-4	30456	-4	-10953	5prime_fragment	FALSE	canonical	3	18	junction_6	12.6200359002044	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTGTATGTGTGTG	8697	False	NA	NA	False	NA	NA	NA	127709321	127755982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154
ES.27256.11	chr5	+	1168	9	NIC	ENSMUSG00000049971.18	novel	3413	12	NA	NA	-4	-1942	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.409973707244	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGCCAGGATTGTCAA	8697	False	NA	NA	False	NA	NA	NA	127709321	127784496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_127709416_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.12	chr5	+	2530	2	ISM	ENSMUSG00000049971.18	ENSMUST00000137157.8	1713	11	-3	45147	-3	-43116	5prime_fragment	FALSE	canonical	3	60	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTCAGTTCCTGCTTTT	8698	False	NA	NA	False	NA	NA	NA	127709322	127723819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_127709416_127721382
ES.27256.13	chr5	+	2784	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	2	627	2	-627	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATCTATTTTTTAAA	8703	False	NA	13	True	AATAAA	-18	NA	127709327	127785811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.14	chr5	+	2570	9	NIC	ENSMUSG00000049971.18	novel	3413	12	NA	NA	2	-633	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.7349939951952	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTATATATATCTATTT	8703	False	NA	7	True	AATAAA	-12	NA	127709327	127785805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_127709416_127721382_127721532_127740405_127740443_127741715_127741773_127754268_127754365_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.15	chr5	+	1648	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	2	1763	2	-1763	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGAGAGCCCAGCTTGC	8703	False	NA	37	True	NA	NA	NA	127709327	127784675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.16	chr5	+	2894	1	Intergenic	novelGene_22711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCAATTGTAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	127734928	127737822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_127734900_127737800
ES.27256.17	chr5	+	1176	5	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	32176	-1768	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.4318633651737	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTACCTGAGAGCCCAG	NA	False	NA	32	True	NA	NA	NA	127766272	127784670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_127766441_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.18	chr5	+	3327	2	ISM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	59672	1577	34901	-1577	3prime_fragment	FALSE	canonical	3	22	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGTGACAAGAGGTCA	NA	False	NA	NA	False	NA	NA	NA	127768997	127784861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_127771390_127783926
ES.27256.2	chr5	+	3104	13	NNC	ENSMUSG00000049971.18	novel	3413	12	NA	NA	-190	-625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.8842053081834	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATCTATTTTTTAAAGC	8511	False	NA	15	True	AATAAA	-20	NA	127709135	127785813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127768799_127768926_127771290_127771390_127783926
ES.27256.3	chr5	+	4707	10	NIC	ENSMUSG00000049971.18	novel	3413	12	NA	NA	-56	-1772	intron_retention	FALSE	canonical	0	0	junction_2	15.8612813767861	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGTGTACCTGAGAGC	8645	False	NA	28	True	NA	NA	NA	127709269	127784666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_127709416_127721382_127721532_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127771390_127783926
ES.27256.5	chr5	+	789	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-55	-22135	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	12.7986544431653	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	8646	False	NA	NA	False	NA	NA	NA	127709270	127744800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
ES.27256.6	chr5	+	1829	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-18	1602	-18	-1602	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTCCAGACAATGGTGG	8683	False	NA	NA	False	NA	NA	NA	127709307	127784836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.7	chr5	+	2884	10	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	-17	-4463	intron_retention	FALSE	canonical	0	0	junction_5	20.6612896230823	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTTATCTTGTGTTTT	8684	False	NA	NA	False	AATAAA	-18	NA	127709308	127762472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127741241_127741715_127741773_127754268_127754365_127755154_127755205_127760526_127760641_127761154
ES.27256.8	chr5	+	1281	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-13	2145	-13	-2145	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACTTCTGAAAGTGCT	8688	False	NA	NA	False	NA	NA	NA	127709312	127784293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ES.27256.9	chr5	+	905	9	ISM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	-5	19275	-5	228	5prime_fragment	FALSE	canonical	3	18	junction_6	12.2468108093495	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACACTCTATCTCCTTA	8696	False	NA	NA	False	AATAAA	-18	NA	127709320	127767163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900
ES.27257.1	chr5	-	4098	1	Intergenic	novelGene_22707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTTATACTGATGTT	NA	False	NA	NA	False	NA	NA	NA	127671595	127667497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127667500_127671600
ES.27257.10	chr5	-	2239	6	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.4947308842626	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127694447	127672728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127693878
ES.27257.11	chr5	-	2452	8	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	40.0051017154726	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127694461	127672728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127686037_127686126_127693878
ES.27257.12	chr5	-	6680	7	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	69	0	intron_retention	FALSE	canonical	0	0	junction_4	43.5047890084145	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAAGAGCTTCCTGATG	NA	False	NA	-8	True	TATAAA	-15	NA	127694376	127672730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680916_127681174_127681253_127681601_127686126_127693878
ES.27257.14	chr5	-	2149	8	NNC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	-50525	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	45.0269760413529	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCAAGAGCTTCCTGA	NA	False	NA	-10	True	TATAAA	-13	NA	127760486	127672732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127760404
ES.27257.15	chr5	-	167	1	Intergenic	novelGene_22708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTTTAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127721133	127720966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127721000_127721100
ES.27257.16	chr5	-	232	1	Intergenic	novelGene_22709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGAACGGTAGGTATAC	NA	False	NA	NA	False	NA	NA	NA	127732080	127731848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127731800_127732100
ES.27257.17	chr5	-	3355	1	Intergenic	novelGene_22710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGGAGTGGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	127737888	127734533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_127734500_127737900
ES.27257.18	chr5	-	2556	1	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGGGTGGGGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	127740870	127738314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_127738300_127740900
ES.27257.19	chr5	-	2392	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAGTCAATGGGCT	NA	False	NA	NA	False	NA	NA	NA	127758838	127755487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_127755558_127756516
ES.27257.2	chr5	-	4466	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	19	-1753	-16	1753	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGCAGATGATACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	127694461	127670974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ES.27257.3	chr5	-	3858	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	-9	-1117	-7	1117	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTGCTGTTTGGGGTG	NA	False	NA	NA	False	AATAAA	-13	NA	127694489	127671610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ES.27257.4	chr5	-	2672	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	238	-178	48	178	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCATCCACTGTGCCC	NA	False	NA	NA	False	AAGAAA	-14	NA	127694242	127672549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ES.27257.5	chr5	-	6350	7	NIC	ENSMUSG00000029416.18	novel	2732	8	NA	NA	2	8	intron_retention	FALSE	canonical	3	79	junction_5	14.1067359796659	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGATGGTTTCTCCATA	NA	False	NA	3	True	TATAAA	-26	NA	127694443	127672719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ES.27257.6	chr5	-	2718	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	15	-1	15	1	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCTTCCTGATGGTTT	NA	False	NA	-4	True	TATAAA	-19	NA	127694465	127672726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ES.27257.7	chr5	-	1865	7	NIC	ENSMUSG00000029416.18	novel	2732	8	NA	NA	544	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	43.3464723670412	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127685871	127672728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680916_127681174_127681253_127681601_127681771_127685835
ES.27257.8	chr5	-	2654	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	21	-2	-16	-1	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127694461	127672728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
ES.27257.9	chr5	-	2346	7	NIC	ENSMUSG00000029416.18	novel	2673	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	43.1457478270519	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGAGCTTCCTGATGGT	NA	False	NA	-6	True	TATAAA	-17	NA	127694443	127672728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127693878
ES.27258.1	chr5	-	4265	1	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	127769233	127764968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_127765000_127769200
ES.27259.1	chr5	+	2228	2	Antisense	novelGene_ENSMUSG00000034310.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCGAGACACAATCTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	127921578	127924510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_127921656_127922359
ES.27259.2	chr5	+	1489	4	Antisense	novelGene_ENSMUSG00000034310.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGCTCAAAGGGGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	127921610	127951971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_127921799_127930006_127930122_127940421_127940682_127951045
ES.2726.1	chr10	+	1726	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	-27	653	-27	-653	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATACAGTTTGTCACT	NA	False	NA	14	True	AATAAA	-26	NA	44144326	44239634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.12	chr10	+	2291	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	122.27198166383	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATTATGTGGTGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	44144466	44240285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144581_44150636_44150691_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.13	chr10	+	1624	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	60	-665	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	122.27198166383	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTCATTTAATAACATA	NA	False	NA	2	True	AATAAA	-14	NA	44144470	44239622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144581_44150636_44150691_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.14	chr10	+	1868	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	124	360	67	-360	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCCAGTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	44144477	44239927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.15	chr10	+	2217	8	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	100.028567348105	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144499	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144592_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.16	chr10	+	2085	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	92	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	114.342565224951	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144502	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44238911
ES.2726.17	chr10	+	2374	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	130.830460424933	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144509	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44212023_44212202_44222952_44223071_44238911
ES.2726.18	chr10	+	3021	7	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	16124	654	16067	-654	3prime_fragment	FALSE	canonical	3	249	junction_2	23.8006769278149	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACATACAGTTTGTCAC	NA	False	NA	13	True	AATAAA	-25	NA	44160477	44239633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.3	chr10	+	2371	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	-19	0	-19	0	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144334	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.4	chr10	+	2405	9	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	129.254351957681	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144365	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44223212_44223278_44238911
ES.2726.5	chr10	+	2226	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144384	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
ES.2726.6	chr10	+	1444	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	84	824	27	-824	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTGCAGTAATTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	44144437	44239463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.7	chr10	+	2140	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	114.93186387305	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144437	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44144581_44162027_44162194_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.2726.8	chr10	+	2108	8	NNC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_7	103.752255938099	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144438	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44239070
ES.2726.9	chr10	+	2188	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	114.808536267997	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144438	44240287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ES.27260.1	chr5	+	190	1	Intergenic	novelGene_22712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTCTTTATAAG	NA	False	NA	NA	False	NA	NA	NA	128173288	128173478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128173300_128173500
ES.27261.1	chr5	+	4015	1	Intergenic	novelGene_22714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTGGGGAGGAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	128229383	128233398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128229400_128233400
ES.27262.1	chr5	+	181	1	Intergenic	novelGene_22715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATTCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128304253	128304434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128304300_128304400
ES.27263.1	chr5	+	3843	1	Intergenic	novelGene_22716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128341537	128345380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128341500_128345400
ES.27264.1	chr5	+	176	1	Intergenic	novelGene_22719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAGAAAAAAAAAGA	5848	False	NA	NA	False	NA	NA	NA	128450189	128450365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128450200_128450400
ES.27265.1	chr5	-	5602	9	NNC	ENSMUSG00000034310.9	novel	6139	9	NA	NA	-69712	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.65359456941537	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCATGGCTGGCCTTTG	NA	False	NA	NA	False	TATAAA	-35	NA	128422655	127858693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127862008_127866786_127866979_127869412_127869687_127872961_127873168_127941658_127941803_128061304_128061489_128213946_128214094_128345555_128346442_128422400
ES.27265.2	chr5	-	5348	10	NNC	ENSMUSG00000034310.9	novel	6139	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.49897084035912	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCATGGCTGGCCTTT	NA	False	NA	NA	False	TATAAA	-34	NA	128352893	127858694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127862008_127866786_127866979_127869412_127869491_127869607_127869687_127872961_127873168_127941658_127941803_128061304_128061489_128213946_128214094_128345555_128346442_128352774
ES.27265.3	chr5	-	6246	10	NNC	ENSMUSG00000034310.9	novel	6139	9	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.61780219761789	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCATGGCTGGCCTTT	NA	False	NA	NA	False	TATAAA	-34	NA	128510193	127858694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127862008_127866786_127866979_127869412_127869687_127872961_127873168_127941658_127941803_128061304_128061489_128213946_128214094_128345555_128346442_128361238_128361295_128509349
ES.27265.4	chr5	-	2402	7	NNC	ENSMUSG00000034310.9	novel	6139	9	NA	NA	37175	-82325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.46249406456535	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	128472966	127941018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127941803_128061304_128061489_128213946_128214094_128345555_128346442_128347978_128348136_128472198_128472354_128472877
ES.27265.5	chr5	-	2268	6	NNC	ENSMUSG00000034310.9	novel	6139	9	NA	NA	37151	-82326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.54919333848297	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-25	NA	128472990	127941019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_127941803_128061304_128061489_128213946_128214094_128345555_128346442_128472198_128472354_128472877
ES.27265.6	chr5	-	1292	4	NNC	ENSMUSG00000034310.9	novel	748	3	NA	NA	-69619	166213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAGAAGAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	128422562	128179655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128179753_128213946_128214094_128345555_128346442_128422400
ES.27265.7	chr5	-	1097	1	Intergenic	novelGene_22713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128180785	128179688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_128179700_128180800
ES.27265.8	chr5	-	4831	5	Intergenic	novelGene_22717	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTTCAAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	128472985	128356655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_128361042_128361238_128361295_128362018_128362193_128472198_128472292_128472863
ES.27265.9	chr5	-	175	1	Intergenic	novelGene_22718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGATAGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	128418155	128417980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_128418000_128418200
ES.27266.1	chr5	+	206	1	Intergenic	novelGene_22720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAC	7123	False	NA	NA	False	NA	NA	NA	128577866	128578072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128577900_128578100
ES.27267.1	chr5	+	251	1	Intergenic	novelGene_22721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGTGCCACTGAAGC	NA	False	NA	NA	False	NA	NA	NA	128632543	128632794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128632500_128632800
ES.27268.1	chr5	+	181	1	Intergenic	novelGene_22722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	128665146	128665327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_128665100_128665300
ES.27269.1	chr5	+	3345	2	Genic_Genomic	ENSMUSG00000081683.6	novel	3250	1	NA	NA	-1633	7	multi-exon	FALSE	canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGCATTGGTGAGG	NA	False	NA	21	True	AATAAA	-24	NA	128676274	128681164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_128676355_128677899
ES.27269.2	chr5	+	3363	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-107	-6	-107	6	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTGTGCATTGGTGAG	NA	False	NA	20	True	AATAAA	-23	NA	128677800	128681163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_128677800_128681200
ES.27269.3	chr5	+	3204	2	Genic_Genomic	ENSMUSG00000081683.6	novel	3250	1	NA	NA	-7	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGTCACTGTGCATT	NA	False	NA	14	True	AATAAA	-17	NA	128677900	128681157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_128680428_128680480
ES.27269.4	chr5	+	2276	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	-1	975	-1	-975	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGAAGTCTACCTTGAG	NA	False	NA	NA	False	NA	NA	NA	128677906	128680182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_128677900_128680200
ES.27269.5	chr5	+	2850	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	48	352	48	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATCTAACAAAAGAATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	128677955	128680805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_128678000_128680800
ES.2727.1	chr10	+	5201	1	Intergenic	novelGene_2077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTCTCTTCACAGATTT	NA	False	NA	NA	False	AGTAAA	-18	NA	44246803	44252004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_44246800_44252000
ES.27270.1	chr5	-	1241	2	NNC	ENSMUSG00000072591.11	novel	287	2	NA	NA	3550	842	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTTGCTGCTCATAT	NA	False	NA	NA	False	AATAAA	-13	NA	128658892	128655327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128656467_128658790
ES.27270.2	chr5	-	3437	3	NIC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	3332	7	intron_retention	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCCAGATGTGTGTG	NA	False	NA	NA	False	AATAAA	-43	NA	128674386	128656162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_128656350_128662335_128662471_128671271
ES.27270.3	chr5	-	1510	6	NNC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	1	7	intron_retention	FALSE	canonical	0	0	junction_4	5.41848687365763	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCCAGATGTGTGTG	NA	False	NA	NA	False	AATAAA	-43	NA	128677756	128656162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128656350_128661227_128661361_128662335_128662471_128671271_128671975_128672632_128672829_128677600
ES.27270.4	chr5	-	2233	5	NNC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_1	6.02079728939615	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTGTCCTTCCAGATG	NA	False	NA	NA	False	AATAAA	-37	NA	128677710	128656168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128656467_128661227_128661361_128662335_128662471_128671271_128672829_128677600
ES.27270.5	chr5	-	2085	4	NNC	ENSMUSG00000072591.11	novel	2429	6	NA	NA	1346	-4	intron_retention	FALSE	canonical	2	3	junction_3	4.24264068711928	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAGAAATAAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	128676372	128656195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128656350_128662335_128662471_128671271_128672829_128676133
ES.27270.6	chr5	-	1692	1	NIC	ENSMUSG00000072591.11	novel	287	2	NA	NA	4555	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAGAAATAAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	128657887	128656195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_128656200_128657900
ES.27270.7	chr5	-	421	2	NNC	ENSMUSG00000072591.11	novel	287	2	NA	NA	3502	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAGAAATAAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	128658940	128656195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_128656467_128658790
ES.27271.1	chr5	-	975	2	Intergenic	novelGene_22723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAGCAACAAAAAATA	2592	False	NA	NA	False	NA	NA	NA	128733422	128721210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_128721844_128733080
ES.27272.1	chr5	+	4232	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5002	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.19934800614111	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGGGCGTCTCTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	128784589	128832538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784871_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.2	chr5	+	4023	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5008	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.19934800614111	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTCTTGTGGGCGTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	128784595	128832535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784671_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.3	chr5	+	3665	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5009	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.19934800614111	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128784596	128832224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784625_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.4	chr5	+	3752	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5009	-273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.19934800614111	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	128784596	128832265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784671_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.5	chr5	+	4099	23	NNC	ENSMUSG00000029423.11	novel	3013	20	NA	NA	5012	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.57678464961927	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTGGGCGTCTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	128784599	128832537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784671_128784986_128785181_128814512_128814591_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.6	chr5	+	4250	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5016	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.15653588936696	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGCGTCTCTGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	128784603	128832539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784871_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831184_128831256
ES.27272.7	chr5	+	3704	22	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5041	396	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.19934800614111	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTTTCTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	128784628	128832049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128784871_128784986_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.8	chr5	+	3952	21	NIC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	5398	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	2.97111090334912	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGGGCGTCTCTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	128784985	128832538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_128785181_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27272.9	chr5	+	3777	21	NNC	ENSMUSG00000029423.11	novel	1691	14	NA	NA	12508	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.26955654485436	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTGTGGGCGTCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	128792095	128832536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_128792118_128816107_128816189_128816497_128816613_128817987_128818114_128818555_128818771_128819056_128819179_128820290_128820372_128820843_128821042_128821337_128821450_128822467_128822595_128822711_128822830_128823280_128823396_128824355_128824544_128824898_128824972_128826909_128827111_128827261_128827366_128827894_128827966_128828045_128828200_128829646_128829773_128831004_128831153_128831256
ES.27273.1	chr5	-	6150	12	ISM	ENSMUSG00000029420.15	ENSMUST00000199537.5	6966	17	19059	2	19012	-2	3prime_fragment	FALSE	canonical	0	0	junction_2	0.890723542830247	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATGCCTTTTTGTGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	128878074	128834856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_128838539_128847292_128847365_128848763_128848868_128850400_128850570_128851232_128851418_128857322_128857441_128861854_128862014_128863715_128863863_128865222_128865679_128866670_128866823_128874094_128874908_128877981
ES.27274.1	chr5	+	149	1	Intergenic	novelGene_22724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	129043619	129043768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129043600_129043800
ES.27275.1	chr5	+	180	1	Intergenic	novelGene_22726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGTGTAAGCCCACAG	NA	False	NA	11	True	NA	NA	NA	129080781	129080961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129080800_129081000
ES.27276.1	chr5	-	2940	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	-1	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085639	129061620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.10	chr5	-	1062	9	ISM	ENSMUSG00000029428.14	ENSMUST00000100680.10	2769	10	-22	4100	-8	2	5prime_fragment	FALSE	canonical	3	44	junction_2	6.15299723711948	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCTTATTTGTATATT	NA	False	NA	NA	False	ATTAAA	-13	NA	129085621	129065726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.11	chr5	-	215	1	Intergenic	novelGene_22725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAGATTTTGTACGAT	NA	False	NA	NA	False	NA	NA	NA	129080409	129080194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129080200_129080400
ES.27276.12	chr5	-	3883	1	NIC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	4	-5561	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAATTTAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	129085595	129081712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129081700_129085600
ES.27276.2	chr5	-	5155	9	NIC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	44	junction_2	6.15299723711948	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085608	129061620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.3	chr5	-	2817	10	FSM	ENSMUSG00000029428.14	ENSMUST00000100680.10	2769	10	-42	-6	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	17.0822267030912	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085641	129061620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129063495_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.4	chr5	-	4098	10	NIC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	41	junction_2	5.07961308918332	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085591	129061620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.7	chr5	-	4172	10	NIC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	5	-4	intron_retention	FALSE	canonical	3	41	junction_1	6.61647774709307	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATCGTTTGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	129085594	129061630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.8	chr5	-	3596	11	NNC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.2603812993423	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATCGTTTGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	129085595	129061630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129064205_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27276.9	chr5	-	3785	10	NIC	ENSMUSG00000029428.14	novel	2939	11	NA	NA	8	-4	intron_retention	FALSE	canonical	3	41	junction_2	6.6332495807108	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATCGTTTGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	129085591	129061630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ES.27277.1	chr5	+	1667	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	-301	1011	-301	-1011	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	2333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCTAGGATGATATCT	41	False	NA	NA	False	CATAAA	-18	NA	129096831	129100376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.10	chr5	+	1068	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	1	-1161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5618.27911819981	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	476	False	NA	NA	False	AATAAA	-19	NA	129097266	129100226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099241_129099438_129099610_129099837
ES.27277.11	chr5	+	2101	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	135	141	2	-141	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAATGTAGAACCTTTAT	477	False	NA	NA	False	AATACA	-18	NA	129097267	129101246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.12	chr5	+	1062	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	2	-1161	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_6	5592.53351701077	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	477	False	NA	NA	False	AATAAA	-19	NA	129097267	129100226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099591_129099837
ES.27277.14	chr5	+	1017	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	4	-1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5618.27911819981	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	479	False	NA	NA	False	AATAAA	-19	NA	129097269	129100226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099500_129099610_129099837
ES.27277.15	chr5	+	1425	5	NIC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	4	-1161	intron_retention	FALSE	canonical	3	14794	junction_3	312.879369725778	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	479	False	NA	NA	False	AATAAA	-19	NA	129097269	129100226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097639_129097747_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.16	chr5	+	1321	6	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	4	-1160	intron_retention	FALSE	canonical	3	19	junction_2	6082.8407639852	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	479	False	NA	NA	False	AATAAA	-20	NA	129097269	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097639_129097747_129097825_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.17	chr5	+	1224	6	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	4	-1160	intron_retention	FALSE	canonical	0	0	junction_4	5947.94509053337	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	479	False	NA	NA	False	AATAAA	-20	NA	129097269	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097639_129097747_129098056_129099066_129099302_129099438_129099610_129099837
ES.27277.19	chr5	+	1322	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	-59	1160	11	-1160	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	486	False	NA	NA	False	AATAAA	-20	NA	129097276	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.2	chr5	+	2329	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	46	2	46	-2	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	388	False	NA	19	True	AATATA	-21	NA	129097178	129101385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.20	chr5	+	1064	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	22	-1160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5595.79242725183	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	497	False	NA	NA	False	AATAAA	-20	NA	129097287	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099835
ES.27277.23	chr5	+	2393	4	NIC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	-22	-1160	intron_retention	FALSE	canonical	3	14794	junction_2	350.567476465738	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	523	False	NA	NA	False	AATAAA	-20	NA	129097313	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097639_129097747_129099255_129099438_129099610_129099837
ES.27277.25	chr5	+	1036	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	181	1160	-22	-1160	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	523	False	NA	NA	False	AATAAA	-20	NA	129097313	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.28	chr5	+	2547	5	NIC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	-22	-7	intron_retention	FALSE	canonical	3	14794	junction_3	249.215142998976	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGTTTTCTGAGTCAT	523	False	NA	14	True	AATATA	-16	NA	129097313	129101380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.29	chr5	+	6480	1	Genic_Genomic	ENSMUSG00000029430.14	novel	NA	NA	NA	NA	-22	2406	mono-exon	FALSE	NA	NA	NA	NA	NA	2338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATGAAATTGTACTACAA	523	False	NA	NA	False	AATAAA	-14	NA	129097313	129103793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_129097300_129103800
ES.27277.3	chr5	+	1130	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-18	-1151	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	5645.42574912547	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCCCTTGCTTATTAA	457	False	NA	NA	False	AATAAA	-29	NA	129097247	129100236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097572_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.31	chr5	+	898	5	NIC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-16	-1160	combination_of_known_splicesites	FALSE	canonical	1	19	junction_1	6519.27731328404	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	529	False	NA	NA	False	AATAAA	-20	NA	129097319	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097343_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.32	chr5	+	2427	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	-6	2	-6	-2	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	539	False	NA	19	True	AATATA	-21	NA	129097329	129101385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.33	chr5	+	1376	5	NIC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	-4	-1160	intron_retention	FALSE	canonical	3	14794	junction_3	249.215142998976	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	541	False	NA	NA	False	AATAAA	-20	NA	129097331	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.34	chr5	+	2266	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5691.21391317841	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	548	False	NA	19	True	AATATA	-21	NA	129097338	129101385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097440_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.35	chr5	+	1179	6	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	75	-1160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6099.90940916339	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	620	False	NA	NA	False	AATAAA	-20	NA	129097410	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097639_129097747_129097833_129097929_129098056_129099075_129099255_129099438_129099610_129099837
ES.27277.36	chr5	+	2696	1	NIC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	196	-1160	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	741	False	NA	NA	False	AATAAA	-20	NA	129097531	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097500_129100200
ES.27277.37	chr5	+	5047	4	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	196	-2408	196	2408	intron_retention	FALSE	canonical	3	15341	junction_3	123.445894580941	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAATTGTACTACAATT	741	False	NA	NA	False	AATAAA	-16	NA	129097531	129103795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066
ES.27277.39	chr5	+	1722	2	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	2100	2	2100	-2	3prime_fragment	FALSE	canonical	3	15069	junction_1	0	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	2645	False	NA	19	True	AATATA	-21	NA	129099435	129101385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129099610_129099837
ES.27277.4	chr5	+	1142	5	NIC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-8	-1160	intron_retention	FALSE	canonical	1	113	junction_1	6478.59214548192	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	467	False	NA	NA	False	AATAAA	-20	NA	129097257	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097343_129097747_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.40	chr5	+	564	2	ISM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	2100	1160	2100	-1160	3prime_fragment	FALSE	canonical	3	15069	junction_1	0	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	2645	False	NA	NA	False	AATAAA	-20	NA	129099435	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129099610_129099837
ES.27277.7	chr5	+	2352	6	NIC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	11744	junction_1	1383.96869906801	2338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	474	False	NA	19	True	AATATA	-21	NA	129097264	129101385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129097343_129097591_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27277.8	chr5	+	1077	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	1	-1160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5540.77062680715	2331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGAATCATCCCTT	476	False	NA	NA	False	AATAAA	-20	NA	129097266	129100227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129097343_129097591_129097633_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ES.27278.1	chr5	-	1493	1	Intergenic	novelGene_22727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAACTAGCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	129097032	129095539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129095500_129097000
ES.27279.1	chr5	+	176	1	Intergenic	novelGene_22728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	129107866	129108042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129107900_129108000
ES.2728.1	chr10	-	5779	2	Intergenic	novelGene_2076	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAGACCACAGAGA	NA	False	NA	NA	False	NA	NA	NA	44249476	44241991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44245952_44247657
ES.27280.1	chr5	-	156	1	Intergenic	novelGene_22729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAACTAAATAAATAAATC	6487	False	NA	NA	False	NA	NA	NA	129122082	129121926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129121900_129122100
ES.27281.1	chr5	+	6684	26	NNC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	-30664	1804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7999712230067	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGAGTCTTTGGCTG	NA	False	NA	NA	False	TTTAAA	-27	NA	129143149	129283467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129143344_129174372_129174410_129186641_129186726_129189291_129189388_129192118_129192242_129199474_129199655_129205917_129206173_129208640_129208697_129209775_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.10	chr5	+	4372	6	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	92879	-1811	92872	1811	3prime_fragment	FALSE	canonical	3	46	junction_2	8.15843122174846	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTGGCTGGTATGTC	NA	False	NA	NA	False	TTTAAA	-34	NA	129266692	129283474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.11	chr5	+	3657	3	NIC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	102989	0	intron_retention	FALSE	canonical	3	64	junction_2	1	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	NA	False	NA	29	True	AATAAA	-17	NA	129276809	129281663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129278238_129278519_129278613_129279527
ES.27281.2	chr5	+	4837	25	NNC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	-30658	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8530057723678	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	NA	False	NA	29	True	AATAAA	-17	NA	129143155	129281663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129143344_129186641_129186726_129189291_129189388_129192118_129192242_129199474_129199655_129205917_129206173_129208640_129208697_129209775_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.3	chr5	+	1267	3	Intergenic	novelGene_22730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTATTTGTTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	129143889	129145893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129144518_129144833_129144887_129145307
ES.27281.4	chr5	+	3287	13	NNC	ENSMUSG00000044017.17	novel	4141	25	NA	NA	47264	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.2614110629016	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGAGTCTTGAGCGTC	NA	False	NA	26	True	AATAAA	-14	NA	129221084	129281660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129221173_129221655_129221790_129239658_129239733_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.5	chr5	+	178	1	Intergenic	novelGene_22733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	129231893	129232071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129231900_129232100
ES.27281.6	chr5	+	1730	1	NIC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	64885	-40309	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAAGAAAGGAAGGAA	3669	False	NA	NA	False	NA	NA	NA	129238705	129240435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129238700_129240400
ES.27281.7	chr5	+	3147	11	NIC	ENSMUSG00000044017.17	novel	4141	25	NA	NA	65757	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	16.6180624622728	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGAGTCTTGAGCGTCA	4541	False	NA	27	True	AATAAA	-15	NA	129239577	129281661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129239733_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.8	chr5	+	3257	12	ISM	ENSMUSG00000044017.17	ENSMUST00000056617.14	5163	26	65778	2	65771	-2	3prime_fragment	FALSE	canonical	3	43	junction_2	8.40306909693916	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGAGTCTTGAGCGTCA	4555	False	NA	27	True	AATAAA	-15	NA	129239591	129281661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27281.9	chr5	+	3315	13	NNC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	70019	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6916222915468	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGAGTCTTGAGCGTCA	8803	False	NA	27	True	AATAAA	-15	NA	129243839	129281661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129243941_129247741_129247840_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ES.27282.1	chr5	-	267	1	Intergenic	novelGene_22731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	129156743	129156476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129156500_129156700
ES.27283.1	chr5	-	575	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	-54	-80	-54	80	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTTAAAAGGCCCTA	NA	False	NA	NA	False	AATAAA	-44	NA	129205635	129205060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129205100_129205600
ES.27284.1	chr5	-	182	1	Intergenic	novelGene_22732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATAAAAAAAAGTATATA	NA	False	NA	NA	False	NA	NA	NA	129226685	129226503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129226500_129226700
ES.27285.1	chr5	+	1746	2	Intergenic	novelGene_22734	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGGTTTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	129298530	129303856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129298647_129302226
ES.27286.1	chr5	-	832	1	Intergenic	novelGene_22735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129317981	129317149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129317100_129318000
ES.27287.1	chr5	+	4726	1	Intergenic	novelGene_22736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGCTCTCTTGCTTCTTG	3914	False	NA	NA	False	NA	NA	NA	129515094	129519820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129515100_129519800
ES.27288.1	chr5	+	5863	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-11	0	intron_retention	FALSE	canonical	3	39	junction_14	23.0561222907605	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578273	129648448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.11	chr5	+	5533	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	32.2412300258574	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTGGGGCTCTCCT	NA	False	NA	11	True	AATAAA	-24	NA	129578295	129648443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129580763_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593197_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.12	chr5	+	3367	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	24.9767793394753	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGGGCTCTCCTT	NA	False	NA	12	True	AATAAA	-25	NA	129578295	129648444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.13	chr5	+	3493	19	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.4896335536171	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCTAGCAGCCTGGGGC	NA	False	NA	5	True	AATAAA	-18	NA	129578295	129648437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129633547_129633834_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.14	chr5	+	1811	1	FSM	ENSMUSG00000029439.15	ENSMUST00000198423.2	655	1	-1159	3	-5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGGCCTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	129578298	129580109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129578300_129580100
ES.27288.15	chr5	+	1145	1	FSM	ENSMUSG00000029439.15	ENSMUST00000199887.2	3398	1	-7	2260	-1	-665	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTCTCCTCATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	129578302	129579447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129578300_129579400
ES.27288.16	chr5	+	3724	2	ISM	ENSMUSG00000029439.15	ENSMUST00000200662.2	725	3	-3101	5919	0	2324	5prime_fragment	FALSE	canonical	3	72	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGATGTGGAGCTGGTA	NA	False	NA	NA	False	AAGAAA	-40	NA	129578303	129584276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129581959_129584207
ES.27288.18	chr5	+	6258	16	NIC	ENSMUSG00000029439.15	novel	5127	18	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_5	29.1334096108841	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129578309	129648441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593197_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.19	chr5	+	9355	17	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	57	junction_7	20.4258376511222	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129578309	129648441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.2	chr5	+	3473	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	22.5492602052145	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGGGCTCTCCTTCTT	NA	False	NA	15	True	AATAAA	-28	NA	129578276	129648447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.22	chr5	+	3230	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	26.6125604499534	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCTGGGGCTCTCCTT	NA	False	NA	12	True	AATAAA	-25	NA	129578316	129648444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129578661_129581046_129581170_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.23	chr5	+	5198	19	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5239773515304	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129578557	129648441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129580673_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.24	chr5	+	8968	16	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	313	0	intron_retention	FALSE	canonical	3	39	junction_12	23.6639435053041	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGGGCTCTCCTTC	NA	False	NA	13	True	AATAAA	-26	NA	129580535	129648445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.25	chr5	+	3368	16	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	97	-4	intron_retention	FALSE	canonical	3	26	junction_9	24.9422443969174	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129581134	129648441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.26	chr5	+	4938	7	NNC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	-3006	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	43.1486448866654	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTAGCTAGCAGCCTGG	NA	False	NA	2	True	AATAAA	-15	NA	129622998	129648434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129626749_129627760_129627952_129631506_129631773_129637743_129637859_129646704_129646879_129647539_129647613_129648065
ES.27288.27	chr5	+	4698	6	NIC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	-1736	-4	intron_retention	FALSE	canonical	3	63	junction_2	22.4445984593176	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCAGCCTGGGGCTCTC	NA	False	NA	9	True	AATAAA	-22	NA	129624268	129648441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.28	chr5	+	2603	8	NNC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	-559	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.1638132847305	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTGGGGCTCTCCT	NA	False	NA	11	True	AATAAA	-24	NA	129625445	129648443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129626749_129627760_129627952_129631506_129631773_129636580_129636673_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.29	chr5	+	12187	4	NIC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	-256	-2	intron_retention	FALSE	canonical	3	76	junction_1	22.4548930574657	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTGGGGCTCTCCT	NA	False	NA	11	True	AATAAA	-24	NA	129625748	129648443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129626749_129627760_129637870_129646704_129646879_129647539
ES.27288.3	chr5	+	3251	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	2	24	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	23.627296395231	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCACGTACTGTGCC	NA	False	NA	40	True	GGGGCT	-15	NA	129578286	129648472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.30	chr5	+	7450	6	NIC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	475	0	intron_retention	FALSE	canonical	3	76	junction_1	17.8504901893477	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGGGCTCTCCTTC	NA	False	NA	13	True	AATAAA	-26	NA	129626479	129648445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129626749_129627760_129627952_129631506_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.31	chr5	+	4034	5	NNC	ENSMUSG00000029439.15	novel	2107	8	NA	NA	-3829	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.8650174481441	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGGGCTCTCCTTCTT	NA	False	NA	15	True	AATAAA	-28	NA	129633393	129648447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129636673_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.4	chr5	+	3305	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	8	0	8	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578292	129648448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.5	chr5	+	3206	18	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	27.4429259892456	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGCAGCCTGGGGCTCT	NA	False	NA	8	True	AATAAA	-21	NA	129578292	129648440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620353_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.6	chr5	+	3399	1	FSM	ENSMUSG00000029439.15	ENSMUST00000199887.2	3398	1	-16	15	9	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTGAA	NA	False	NA	NA	False	AATAGA	-35	NA	129578293	129581692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129578300_129581700
ES.27288.7	chr5	+	3313	19	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	32.702361450581	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578293	129648448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129578661_129581046_129581170_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636673_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.8	chr5	+	3547	20	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.7888872553824	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTAGCTAGCAGCCT	NA	False	NA	0	True	AATAAA	-13	NA	129578293	129648432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129578661_129581046_129581170_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593197_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129624152_129624325_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27288.9	chr5	+	3359	19	NNC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	29.1661904723031	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578294	129648448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636673_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ES.27289.1	chr5	+	3423	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	-24	-2886	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_8	58.5586126125877	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGACAGCTCAGTGGTAA	NA	False	NA	13	True	AATAAA	-19	NA	129661208	129685277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
ES.27289.11	chr5	+	3361	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	13	-2889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.5046391999925	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTGACAGCTCAGTGG	NA	False	NA	10	True	AATAAA	-16	NA	129661245	129685274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673781_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
ES.27289.12	chr5	+	3385	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	15	-2892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.1963430728217	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGGTTGACAGCTCAG	NA	False	NA	7	True	AATAAA	-13	NA	129661247	129685271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661383_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.13	chr5	+	1936	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	31	4455	31	4193	multi-exon	FALSE	canonical	3	158	junction_6	22.9879195327556	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTCCGGTCCCTCGCTC	NA	False	NA	NA	False	NA	NA	NA	129661263	129683708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.14	chr5	+	1761	9	ISM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	32	5132	32	3516	5prime_fragment	FALSE	canonical	3	158	junction_6	24.3435694794334	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGTATGTTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	129661264	129683031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578
ES.27289.15	chr5	+	3319	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	32	-2888	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.7509535600773	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGACAGCTCAGTGGT	NA	False	NA	11	True	AATAAA	-17	NA	129661264	129685275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672644_129673732_129673803_129675722_129675823_129678996_129679080_129679132_129679319_129682578_129682837_129683339
ES.27289.17	chr5	+	4147	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	50	2225	50	-2225	multi-exon	FALSE	canonical	3	158	junction_6	22.9879195327556	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGACTTCTGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	129661282	129685938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.18	chr5	+	3757	9	NIC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	52	-2890	intron_retention	FALSE	canonical	3	158	junction_5	19.0246550560056	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTGACAGCTCAGTG	NA	False	NA	9	True	AATAAA	-15	NA	129661284	129685273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129661513_129671607_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.19	chr5	+	3801	9	NIC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	52	-2890	intron_retention	FALSE	canonical	3	158	junction_5	22.5596431709369	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTGACAGCTCAGTG	NA	False	NA	9	True	AATAAA	-15	NA	129661284	129685273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129661513_129671607_129671741_129672017_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.2	chr5	+	3424	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	-4	-2889	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	61.6869836401269	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTGACAGCTCAGTGG	NA	False	NA	10	True	AATAAA	-16	NA	129661228	129685274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672581_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.3	chr5	+	3561	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	-4	2865	-4	-2865	multi-exon	FALSE	canonical	3	158	junction_6	22.9879195327556	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGGTTGATCTCCTC	NA	False	NA	34	True	AATAAA	-40	NA	129661228	129685298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.4	chr5	+	3283	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	0	-2889	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	76.2288626845032	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTGACAGCTCAGTGG	NA	False	NA	10	True	AATAAA	-16	NA	129661232	129685274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672581_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
ES.27289.5	chr5	+	2614	6	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	1	-2890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.5717337025573	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGTTGACAGCTCAGTG	NA	False	NA	9	True	AATAAA	-15	NA	129661233	129685273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661320_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.6	chr5	+	3519	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	6	-2888	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.5728217734454	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTGACAGCTCAGTGGT	NA	False	NA	11	True	AATAAA	-17	NA	129661238	129685275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672477_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ES.27289.9	chr5	+	3934	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	11	-2227	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	76.2288626845032	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGACTTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	129661243	129685936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672581_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
ES.2729.1	chr10	-	724	3	NNC	ENSMUSG00000111078.2	novel	2587	3	NA	NA	-3483	-1563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGGCTTGTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	44303803	44295958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_44296226_44297267_44297420_44303498
ES.27290.1	chr5	-	1645	1	Antisense	novelGene_ENSMUSG00000029436.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATTCTGCAAAAACACT	5990	False	NA	NA	False	NA	NA	NA	129676331	129674686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129674700_129676300
ES.27291.1	chr5	-	3869	1	Antisense	novelGene_ENSMUSG00000029436.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTGGGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	129685059	129681190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129681200_129685100
ES.27291.2	chr5	-	2529	2	Antisense	novelGene_ENSMUSG00000029436.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	129684238	129681206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129682835_129683337
ES.27292.1	chr5	-	413	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	509	-40	509	40	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTACA	4550	False	NA	NA	False	AATAAA	-17	NA	129700426	129700013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129700000_129700400
ES.27293.1	chr5	-	3940	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	-10	-1	-10	1	multi-exon	TRUE	canonical	3	10	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAAACAGCCTCATGG	NA	False	NA	NA	False	AATAAA	-23	NA	129747173	129731655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129735450_129737833_129737930_129747123
ES.27293.2	chr5	-	3666	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	-13	276	-13	-276	multi-exon	FALSE	canonical	3	10	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGGTTTTTTGTCACA	NA	False	NA	NA	False	AATAAA	-34	NA	129747176	129731932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129735450_129737833_129737930_129747123
ES.27293.3	chr5	-	3107	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	5	817	5	-817	multi-exon	FALSE	canonical	3	10	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACAGGTGTCAGAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	129747158	129732473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129735450_129737833_129737930_129747123
ES.27294.1	chr5	+	876	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	-22	-22	-16	22	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	738	False	NA	45	True	CATAAA	-34	NA	129792544	129795566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ES.27294.10	chr5	+	1035	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	364.571895058666	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	775	False	NA	43	True	CATAAA	-32	NA	129792581	129795564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129793026_129793790_129793931_129794979
ES.27294.11	chr5	+	1989	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	9	184	2	0	multi-exon	FALSE	canonical	3	460	junction_1	221	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	777	False	NA	NA	False	NA	NA	NA	129792583	129795755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129793931_129794979
ES.27294.12	chr5	+	1790	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	17	375	-6	20	multi-exon	FALSE	canonical	3	460	junction_1	221	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	785	False	NA	43	True	CATAAA	-32	NA	129792591	129795564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129793931_129794979
ES.27294.13	chr5	+	520	3	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	-6	-17	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	785	False	NA	22	True	ATTAAA	-35	NA	129792591	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129792614_129793790_129793931_129794979
ES.27294.14	chr5	+	1677	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-6	22	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	785	False	NA	45	True	CATAAA	-34	NA	129792591	129795566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
ES.27294.15	chr5	+	731	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	-6	-17	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	785	False	NA	22	True	ATTAAA	-35	NA	129792591	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
ES.27294.16	chr5	+	4965	2	NNC	ENSMUSG00000034211.15	novel	305	2	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTG	785	False	NA	NA	False	NA	NA	NA	129792591	129799618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129795763_129797824
ES.27294.17	chr5	+	1449	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-5	-15	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTGCATCCTTTTTCAG	786	False	NA	24	True	ATTAAA	-37	NA	129792592	129795339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
ES.27294.18	chr5	+	2609	2	ISM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	25	126	-5	-19	intron_retention	FALSE	canonical	3	460	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGTTGCATCCTTTT	786	False	NA	20	True	ATTAAA	-33	NA	129792592	129795335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129792614_129792747
ES.27294.19	chr5	+	1865	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	786	False	NA	NA	False	NA	NA	NA	129792592	129795755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
ES.27294.2	chr5	+	784	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	-6	4283	-6	-17	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	748	False	NA	22	True	ATTAAA	-35	NA	129792554	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
ES.27294.20	chr5	+	596	4	FSM	ENSMUSG00000034211.15	ENSMUST00000136108.8	396	4	-5	-195	-5	-41	multi-exon	FALSE	canonical	2	2	junction_1	368.698913598737	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAAGAGCTTAGTGCT	786	False	NA	-2	True	ATTAAA	-11	NA	129792592	129795313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792635_129792747_129792828_129793790_129793931_129794979
ES.27294.21	chr5	+	1297	5	NNC	ENSMUSG00000034211.15	novel	832	4	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	374.6475009926	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAACTTGCAAGGAGAA	786	False	NA	NA	False	NA	NA	NA	129792592	129795942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129792828_129793329_129793423_129793790_129793931_129794979
ES.27294.22	chr5	+	1082	4	NNC	ENSMUSG00000034211.15	novel	1208	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	348.312439564761	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCCTGTTTTGTTGT	786	False	NA	NA	False	NA	NA	NA	129792592	129795755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129792893_129793790_129793931_129794979
ES.27294.23	chr5	+	1043	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	28	-239	-3	28	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGGTTTCTCTGTGTA	788	False	NA	NA	False	AGTAAA	-26	NA	129792594	129795783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ES.27294.24	chr5	+	761	4	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	1	-17	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	394.04004308643	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	792	False	NA	22	True	ATTAAA	-35	NA	129792598	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129792635_129792747_129792975_129793790_129793931_129794979
ES.27294.25	chr5	+	1557	3	NIC	ENSMUSG00000034211.15	novel	396	4	NA	NA	1	-37	intron_retention	FALSE	canonical	2	2	junction_1	450	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCTTAGTGCTCCAT	792	False	NA	2	True	ATTAAA	-15	NA	129792598	129795317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129792635_129792747_129793931_129794979
ES.27294.26	chr5	+	1524	2	ISM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	171	621	-15	-36	3prime_fragment	FALSE	canonical	3	902	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTAGTGCTCCATA	939	False	NA	3	True	ATTAAA	-16	NA	129792745	129795318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129793931_129794979
ES.27294.27	chr5	+	1428	3	NNC	ENSMUSG00000034211.15	novel	868	3	NA	NA	-15	-17	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	437	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	939	False	NA	22	True	ATTAAA	-35	NA	129792745	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129793676_129793790_129793931_129794979
ES.27294.3	chr5	+	628	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	-5	209	1	-19	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGTTGCATCCTTTT	755	False	NA	20	True	ATTAAA	-33	NA	129792561	129795335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ES.27294.4	chr5	+	1591	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	-11	602	3	-17	multi-exon	FALSE	canonical	3	460	junction_1	221	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGTTGCATCCTTTTTC	757	False	NA	22	True	ATTAAA	-35	NA	129792563	129795337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129793931_129794979
ES.27294.5	chr5	+	1031	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	-14	191	-1	20	multi-exon	FALSE	canonical	3	22	junction_2	359.259732722101	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTTATTGTGTGTGT	759	False	NA	43	True	CATAAA	-32	NA	129792565	129795564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129793006_129793790_129793931_129794979
ES.27294.6	chr5	+	990	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	7	4064	0	12	multi-exon	FALSE	canonical	3	150	junction_2	308.575220435256	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTTCAAAATTTATT	761	False	NA	35	True	CATAAA	-24	NA	129792567	129795556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
ES.27294.7	chr5	+	968	4	NIC	ENSMUSG00000034211.15	novel	843	4	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTGATTTTTCAAAA	761	False	NA	29	True	CATAAA	-18	NA	129792567	129795550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
ES.27294.8	chr5	+	918	4	NNC	ENSMUSG00000034211.15	novel	843	4	NA	NA	0	22	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	348.312439564761	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTATTGTGTGTGTGT	761	False	NA	45	True	CATAAA	-34	NA	129792567	129795566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129792893_129793790_129793931_129794979
ES.27294.9	chr5	+	656	4	NNC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	0	-36	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	348.312439564761	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTAGTGCTCCATA	775	False	NA	3	True	ATTAAA	-16	NA	129792581	129795318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129792614_129792747_129792893_129793790_129793931_129794979
ES.27295.1	chr5	+	2160	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	-33	-15	-33	15	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTTTGTTGGTTCGT	7734	False	NA	33	True	AATAAA	-32	NA	129802093	129835406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ES.27295.2	chr5	+	1716	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	-3	399	-3	-322	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTGCAATATTTT	7764	False	NA	NA	False	AATAAA	-17	NA	129802123	129834992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ES.27295.3	chr5	+	1936	9	NIC	ENSMUSG00000029432.13	novel	1600	11	NA	NA	4	0	intron_retention	FALSE	canonical	2	5	junction_7	123.725439481943	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	7771	False	NA	12	True	AATAAA	-18	NA	129802130	129835314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129831905_129831990_129834142
ES.27295.5	chr5	+	3292	1	FSM	ENSMUSG00000086916.3	ENSMUST00000199631.2	3518	1	-3062	3288	-1936	16	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAAGAGGCCATTTTTCC	7814	False	NA	NA	False	NA	NA	NA	129802173	129805465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129802200_129805500
ES.27295.6	chr5	+	1953	10	NNC	ENSMUSG00000029432.13	novel	2112	10	NA	NA	36	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	120.134287002422	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGATGTCTAATTTTTA	7841	False	NA	11	True	AATAAA	-17	NA	129802200	129835313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823397_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ES.27296.1	chr5	-	744	1	Intergenic	novelGene_22737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATTTCAATTAGCCAA	NA	False	NA	NA	False	NA	NA	NA	129804037	129803293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129803300_129804000
ES.27297.1	chr5	-	2629	2	Antisense	novelGene_ENSMUSG00000029432.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATTTGGAAAAACATCAA	NA	False	NA	NA	False	NA	NA	NA	129826721	129823918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129824526_129824699
ES.27298.1	chr5	-	173	1	Intergenic	novelGene_22738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129828160	129827987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129828000_129828200
ES.27299.1	chr5	-	177	1	Intergenic	novelGene_22739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATGTATATATA	NA	False	NA	NA	False	NA	NA	NA	129840091	129839914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129839900_129840100
ES.273.1	chr1	+	1687	1	FSM	ENSMUSG00000102762.2	ENSMUST00000192234.2	713	1	-776	-198	-776	198	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTGCACTACATG	NA	False	NA	NA	False	AATGAA	-31	NA	36371012	36372699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36371000_36372700
ES.273.2	chr1	+	3194	1	FSM	ENSMUSG00000102762.2	ENSMUST00000192234.2	713	1	-776	-1705	-776	1705	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGAACTCACTTTTTA	NA	False	NA	NA	False	NA	NA	NA	36371012	36374206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36371000_36374200
ES.2730.1	chr10	+	4088	2	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCGTCTTAGCTAAAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	44317209	44322639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_44317329_44318670
ES.2730.2	chr10	+	3309	3	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACAGCAGAATCAGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	44317263	44324256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_44317329_44318670_44318850_44321191
ES.2730.3	chr10	+	5318	1	Antisense	novelGene_ENSMUSG00000038151.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAACACAACTCAGACAC	NA	False	NA	NA	False	NA	NA	NA	44321728	44327046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_44321700_44327000
ES.27300.1	chr5	+	818	1	Intergenic	novelGene_22740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAACAAAAACAGTTTAGC	NA	False	NA	NA	False	NA	NA	NA	129861663	129862481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129861700_129862500
ES.27301.1	chr5	+	2667	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	-21	-58	-21	58	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGGAAGGTCAGAACT	NA	False	NA	3	True	AATAAA	-17	NA	129864040	129875270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.10	chr5	+	2216	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	374	-24	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	1194.62813901755	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGAAGCTACTGGAT	NA	False	NA	14	True	AATAAA	-6	NA	129864435	129875188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874397_129874497_129874588
ES.27301.11	chr5	+	1595	15	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	375	-484	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1163.14735760788	1642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAATTTTCTCTTCCT	NA	False	NA	-51	True	NA	NA	NA	129864436	129874728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864462_129864595_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.12	chr5	+	2828	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	375	-14	intron_retention	FALSE	canonical	3	3740	junction_10	456.144713879269	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATCATTCACACT	NA	False	NA	24	True	AATAAA	-16	NA	129864436	129875198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.13	chr5	+	1931	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	375	282	375	-282	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAGTGTTCTTTGAAAGT	NA	False	NA	35	True	NA	NA	NA	129864436	129874930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.14	chr5	+	3733	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	375	-13	intron_retention	FALSE	canonical	3	3618	junction_3	480.048232530394	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGATCATTCACACTT	NA	False	NA	25	True	AATAAA	-17	NA	129864436	129875199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.15	chr5	+	4229	12	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	378	-24	intron_retention	FALSE	canonical	3	3618	junction_3	491.808536285856	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGAAGCTACTGGAT	NA	False	NA	14	True	AATAAA	-6	NA	129864439	129875188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129874497_129874588
ES.27301.16	chr5	+	4861	11	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	378	-21	intron_retention	FALSE	canonical	3	3740	junction_9	488.316587881264	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAGCTACTGGATCAT	NA	False	NA	17	True	AATAAA	-9	NA	129864439	129875191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129874497_129874588
ES.27301.18	chr5	+	4362	12	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	378	-14	intron_retention	FALSE	canonical	2	187	junction_4	1241.16978280655	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATCATTCACACT	NA	False	NA	24	True	AATAAA	-16	NA	129864439	129875198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129867055_129867647_129867756_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.19	chr5	+	4859	11	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	385	-6	intron_retention	FALSE	canonical	3	3618	junction_3	515.774650404612	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCACACTTGAAATGA	NA	False	NA	32	True	AATAAA	-24	NA	129864446	129875206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129871563_129872181_129872316_129873810_129874497_129874588
ES.27301.2	chr5	+	2030	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	26	-292	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1204.35989038249	1650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTTCCGTAAGTGTT	NA	False	NA	25	True	NA	NA	NA	129864087	129874920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864400_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.21	chr5	+	3920	12	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	385	-18	intron_retention	FALSE	canonical	3	3618	junction_3	490.627798197	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTACTGGATCATTCA	NA	False	NA	20	True	AATAAA	-12	NA	129864446	129875194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.23	chr5	+	4318	12	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	386	-24	intron_retention	FALSE	canonical	2	15	junction_6	1295.8625386237	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGAAGCTACTGGAT	NA	False	NA	14	True	AATAAA	-6	NA	129864447	129875188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869104_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.24	chr5	+	2184	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	386	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1204.56414077075	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATCATTCACA	NA	False	NA	22	True	AATAAA	-14	NA	129864447	129875196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870800_129871420_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.27	chr5	+	2431	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	405	-248	405	248	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTTGATTTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	129864466	129875460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.29	chr5	+	2160	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1106.56404077277	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGATCATTCACACTTG	NA	False	NA	26	True	AATAAA	-18	NA	129864466	129875200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874486_129874588
ES.27301.3	chr5	+	3195	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	35	-16	intron_retention	FALSE	canonical	3	3618	junction_2	484.469555287017	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATCATTCACA	NA	False	NA	22	True	AATAAA	-14	NA	129864096	129875196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.30	chr5	+	4937	10	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	-24	intron_retention	FALSE	canonical	3	3618	junction_2	539.176532624829	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGAAGCTACTGGAT	NA	False	NA	14	True	AATAAA	-6	NA	129864466	129875188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129870796_129871414_129871563_129872181_129872316_129873810_129874497_129874588
ES.27301.32	chr5	+	2167	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	409	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1197.47643921925	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTACTGGATCATTCA	NA	False	NA	20	True	AATAAA	-12	NA	129864470	129875194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870692_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.37	chr5	+	2176	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	417	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1106.56404077277	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATCATTCACACT	NA	False	NA	24	True	AATAAA	-16	NA	129864478	129875198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874516_129874588
ES.27301.38	chr5	+	3488	12	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	417	-293	intron_retention	FALSE	canonical	3	3618	junction_3	496.444149314331	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTGTTCCGTAAGTGT	NA	False	NA	24	True	NA	NA	NA	129864478	129874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.39	chr5	+	4307	12	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	417	-16	intron_retention	FALSE	canonical	3	3618	junction_3	501.385716154376	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGGATCATTCACA	NA	False	NA	22	True	AATAAA	-14	NA	129864478	129875196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.40	chr5	+	1764	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	417	407	417	-407	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTTGCCTTGAGT	NA	False	NA	26	True	AAGAAA	-42	NA	129864478	129874805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.41	chr5	+	3413	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	417	-291	intron_retention	FALSE	canonical	3	3618	junction_3	480.048232530394	1650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTTCCGTAAGTGTTC	NA	False	NA	26	True	NA	NA	NA	129864478	129874921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.42	chr5	+	2143	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	418	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1206.48641411979	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTACTGGATCATTCA	NA	False	NA	20	True	AATAAA	-12	NA	129864479	129875194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872314_129873817_129873914_129874423_129874497_129874588
ES.27301.44	chr5	+	2002	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	426	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	1252.47696807389	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGATCATTCACACTTG	NA	False	NA	26	True	AATAAA	-18	NA	129864487	129875200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.46	chr5	+	1697	10	ISM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	3584	-58	704	58	3prime_fragment	FALSE	canonical	3	3740	junction_7	511.397528444131	1665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGGAAGGTCAGAACT	NA	False	NA	3	True	AATAAA	-17	NA	129867645	129875270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.47	chr5	+	186	1	ISM	ENSMUSG00000029447.14	ENSMUST00000201653.3	459	3	985	15	985	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	1536	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129867926	129868112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129867900_129868100
ES.27301.48	chr5	+	3166	7	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	1282	-286	intron_retention	FALSE	canonical	3	3740	junction_4	607.228677407998	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCGTAAGTGTTCTTTGA	NA	False	NA	31	True	NA	NA	NA	129868223	129874926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129868644_129868845_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.49	chr5	+	796	5	ISM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	7346	293	1164	-293	3prime_fragment	FALSE	canonical	3	3740	junction_2	684.150705254332	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTGTTCCGTAAGTGT	NA	False	NA	24	True	NA	NA	NA	129871407	129874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.5	chr5	+	2279	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	48	-21	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1204.35989038249	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAGCTACTGGATCAT	NA	False	NA	17	True	AATAAA	-9	NA	129864109	129875191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864400_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.50	chr5	+	156	1	Intergenic	novelGene_22741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1594	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATTAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	129873201	129873357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129873200_129873400
ES.27301.6	chr5	+	1922	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	58	-293	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1204.1141309015	1650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTGTTCCGTAAGTGT	NA	False	NA	24	True	NA	NA	NA	129864119	129874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129864325_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27301.7	chr5	+	2181	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	362	45	362	-45	multi-exon	FALSE	canonical	3	3618	junction_3	465.957308149311	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGTCTAATAAATACT	NA	False	NA	-7	True	AAAACA	-23	NA	129864423	129875167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ES.27302.1	chr5	+	1679	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	-33	618	-33	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875793	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.10	chr5	+	2147	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	20	97	-5	-97	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	129875846	129892794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.11	chr5	+	1479	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_7	162.237668944329	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875848	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129891479
ES.27302.12	chr5	+	2753	9	NNC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	-3	-171	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	157.782880883827	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGATGTGCATTGTG	NA	False	NA	10	True	AGTAAA	-15	NA	129875848	129892102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129888437_129888677_129888763_129888910_129889056_129891479
ES.27302.13	chr5	+	1668	9	NNC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	157.302256817885	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTATTTATTTATTA	NA	False	NA	15	True	AATAAA	-15	NA	129875848	129892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891434
ES.27302.14	chr5	+	1767	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	460	junction_6	14.9256661561245	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875853	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129889056_129891479
ES.27302.15	chr5	+	996	8	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	2	168	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTCCAGTGTCCAAAA	NA	False	NA	-31	True	NA	NA	NA	129875853	129891807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.16	chr5	+	3156	8	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	4	-2	intron_retention	FALSE	canonical	3	472	junction_3	12.8030608585189	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATTTATTTATTTATT	NA	False	NA	14	True	AATAAA	-14	NA	129875855	129892271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129888763_129888910_129889056_129891479
ES.27302.17	chr5	+	1663	9	NNC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	157.080393429607	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTATTTATTTATTA	NA	False	NA	15	True	AATAAA	-15	NA	129875856	129892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883480_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.18	chr5	+	1673	10	NNC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	199.880766927822	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875856	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129889205_129889263_129891479
ES.27302.19	chr5	+	1546	8	ISM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	2913	619	-2612	-1	3prime_fragment	FALSE	canonical	3	460	junction_5	11.8786380034214	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTATTTATTTATTA	NA	False	NA	15	True	AATAAA	-15	NA	129878739	129892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.2	chr5	+	1256	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	-20	1028	-20	224	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGCTGGTTCAGCTTT	NA	False	NA	25	True	TTTAAA	-21	NA	129875806	129891863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.20	chr5	+	3383	5	ISM	ENSMUSG00000025538.16	ENSMUST00000153063.8	1117	7	2174	-2783	2174	1531	3prime_fragment	FALSE	canonical	3	460	junction_2	7.62807315119618	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGGCCCTTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	129883525	129894422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.21	chr5	+	651	4	ISM	ENSMUSG00000025538.16	ENSMUST00000153063.8	1117	7	5728	-204	5728	204	3prime_fragment	FALSE	canonical	3	460	junction_1	8.73053390247253	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCCCTTTTTGCTTTC	NA	False	NA	5	True	TTTAAA	-1	NA	129887079	129891843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.22	chr5	+	3413	2	ISM	ENSMUSG00000025538.16	ENSMUST00000153063.8	1117	7	7361	-634	7361	0	intron_retention	FALSE	canonical	3	474	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129888712	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129888763_129888910
ES.27302.3	chr5	+	1425	8	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	4	-172	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	159.496401341273	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAAGATGTGCATTGT	NA	False	NA	9	True	AGTAAA	-14	NA	129875830	129892101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129878741_129878899_129881714_129881827_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.4	chr5	+	1474	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	6	784	6	-166	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCATTGTGGGAGA	NA	False	NA	15	True	AGTAAA	-20	NA	129875832	129892107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.5	chr5	+	1208	9	NNC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	6	-852	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	158.290427300579	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	129875832	129890787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129890425
ES.27302.6	chr5	+	2583	8	NNC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	6	-836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.920364735	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGTCTTCCTACTTC	NA	False	NA	NA	False	NA	NA	NA	129875832	129890803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129875928_129878752_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910
ES.27302.7	chr5	+	1480	8	NIC	ENSMUSG00000025538.16	novel	1656	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875835	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.8	chr5	+	3793	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	17	-1546	-8	1546	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTTTTGCTAGGTTGT	NA	False	NA	NA	False	NA	NA	NA	129875843	129894437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27302.9	chr5	+	1349	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	19	896	-6	-278	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGTCTCGAACTCTC	NA	False	NA	-97	True	NA	NA	NA	129875845	129891995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ES.27303.1	chr5	+	175	1	Intergenic	novelGene_22745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	665	False	NA	NA	False	NA	NA	NA	129919223	129919398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129919200_129919400
ES.27303.2	chr5	+	173	2	Antisense	novelGene_ENSMUSG00000025537.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAGCATGCACTG	667	False	NA	NA	False	NA	NA	NA	129919225	129919609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_129919384_129919594
ES.27304.1	chr5	+	177	1	Intergenic	novelGene_22746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAAGCTGCTGCTG	1701	False	NA	NA	False	NA	NA	NA	129920259	129920436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129920300_129920400
ES.27305.1	chr5	+	2473	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	19	0	19	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6024	False	NA	NA	False	AATAAA	-17	NA	129924582	129932464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ES.27305.2	chr5	+	2715	6	NNC	ENSMUSG00000034173.14	novel	730	5	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1814.16978257273	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6025	False	NA	NA	False	AATAAA	-17	NA	129924583	129932464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129924694_129926859_129927012_129927843_129927935_129928023_129928274_129929185_129929337_129930503
ES.27305.3	chr5	+	2542	5	NNC	ENSMUSG00000034173.14	novel	730	5	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.1913107180209	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAAACCCTGTCTCAA	6034	False	NA	NA	False	AATAAA	-8	NA	129924592	129932455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129924694_129927843_129927935_129928023_129928274_129929188_129929337_129930503
ES.27305.4	chr5	+	3654	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	66	-1228	11	1228	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAACTGCATTGTTTTT	6071	False	NA	NA	False	AATAAA	-23	NA	129924629	129933692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ES.27305.5	chr5	+	2490	4	NNC	ENSMUSG00000034173.14	novel	2492	4	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2142.10711424263	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6084	False	NA	NA	False	AATAAA	-17	NA	129924642	129932464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129924771_129928023_129928274_129929185_129929337_129930503
ES.27305.6	chr5	+	5222	3	ISM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	593	7	538	-7	3prime_fragment	FALSE	canonical	3	34	junction_2	2263.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACCCTGTCTCAAAA	6598	False	NA	NA	False	AATAAA	-10	NA	129925156	129932457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129928274_129929185_129929337_129930503
ES.27305.7	chr5	+	2532	4	ISM	ENSMUSG00000034173.14	ENSMUST00000077320.3	730	5	3139	-1791	3139	-7	3prime_fragment	FALSE	canonical	2	34	junction_3	2126.07969956182	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACCCTGTCTCAAAA	9199	False	NA	NA	False	AATAAA	-10	NA	129927757	129932457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_129927935_129928023_129928274_129929185_129929337_129930503
ES.27306.1	chr5	+	4976	4	Fusion	ENSMUSG00000066735.9_ENSMUSG00000095789.7	novel	607	4	NA	NA	-5	1	multi-exon	TRUE	non_canonical	0	0	junction_1	396.944160640595	735	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCTGCCATCGTTCTT	NA	False	NA	14	True	AATAAA	-21	NA	129937403	130015534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_129937411_129970900_129971207_130007359_130007470_130010981
ES.27306.10	chr5	+	2938	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-75	1946	64	0	multi-exon	FALSE	canonical	3	56	junction_1	0	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970874	130013587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130010981
ES.27306.11	chr5	+	1190	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	68	1854	68	313	multi-exon	FALSE	canonical	3	775	junction_1	60.5	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCAGAACTTACTGTAC	NA	False	NA	NA	False	AATAAA	-22	NA	129970878	130011733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.12	chr5	+	3244	4	FSM	ENSMUSG00000066735.9	ENSMUST00000202298.4	607	4	-135	-2502	69	-3	multi-exon	FALSE	canonical	3	11	junction_1	413.244345259423	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTTGTGTTTTATT	NA	False	NA	41	True	AATATA	-14	NA	129970879	130013584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130005829_130006034_130007359_130007470_130010981
ES.27306.13	chr5	+	2913	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	-68	108	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	443.5	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATATTGTTATGACTGT	NA	False	NA	NA	False	ATTAAA	-41	NA	129970881	130013695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129970971_130007359_130007470_130010981
ES.27306.14	chr5	+	6412	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	75	-3375	-64	1429	multi-exon	FALSE	canonical	3	775	junction_1	60.5	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGACTTGGATTGGAGAG	NA	False	NA	NA	False	AATAAA	-22	NA	129970885	130016962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.15	chr5	+	2344	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	79	689	-60	-689	multi-exon	FALSE	canonical	3	775	junction_1	60.5	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTATGCATTGCTG	NA	False	NA	NA	False	NA	NA	NA	129970889	130012898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.16	chr5	+	2602	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-78	-1874	-60	-293	multi-exon	FALSE	canonical	3	55	junction_1	420.5	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATTGCTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	129970889	130013294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971069_130007359_130007470_130010981
ES.27306.17	chr5	+	2202	4	NNC	ENSMUSG00000066735.9	novel	650	3	NA	NA	-60	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	410.030080197376	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGATATTGTGCTGCCA	NA	False	NA	6	True	AATAAA	-13	NA	129970889	130015526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971069_130007359_130007470_130010981_130012600_130015231
ES.27306.18	chr5	+	5045	4	NIC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	414.951670545967	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970889	130015533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129971069_130005829_130006034_130007359_130007470_130010981
ES.27306.19	chr5	+	3858	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	396.944160640595	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970889	130015531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010981_130011544_130012662
ES.27306.2	chr5	+	181	1	Intergenic	novelGene_22748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCCTAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	129966446	129966627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129966400_129966600
ES.27306.20	chr5	+	3227	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-59	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	396.944160640595	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATATTGTGCTGCCAT	NA	False	NA	7	True	AATAAA	-14	NA	129970890	130015527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010981_130011424_130013168
ES.27306.21	chr5	+	4944	5	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-59	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	379.306851374978	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGATATTGTGCTGCCA	NA	False	NA	6	True	AATAAA	-13	NA	129970890	130015526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971069_130005829_130006034_130007359_130007470_130010981_130012194_130012286
ES.27306.22	chr5	+	964	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-56	3901	-56	212	multi-exon	FALSE	canonical	3	56	junction_1	0	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTAATATGTTTTTAG	NA	False	NA	NA	False	ATTAAA	-16	NA	129970893	130011632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130010981
ES.27306.23	chr5	+	4727	2	NIC	ENSMUSG00000066735.9	novel	4809	2	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970893	130015533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129971069_130010981
ES.27306.24	chr5	+	4150	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	85	-1123	-54	-823	multi-exon	FALSE	canonical	3	775	junction_1	60.5	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTTATTTATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	129970895	130014710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.25	chr5	+	704	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	86	2322	-53	-56	multi-exon	FALSE	canonical	3	775	junction_1	60.5	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGTTTTGTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	129970896	130011265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.26	chr5	+	4862	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-53	0	-53	0	multi-exon	FALSE	canonical	3	56	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970896	130015533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130010981
ES.27306.27	chr5	+	662	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-68	56	-50	43	multi-exon	FALSE	canonical	3	55	junction_1	420.5	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGCTATTTCCTGTGT	NA	False	NA	NA	False	TTTAAA	-20	NA	129970899	130011364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971069_130007359_130007470_130010981
ES.27306.28	chr5	+	1228	4	NIC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-50	306	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	414.951670545967	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCACCCCTGCAGAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	129970899	130011726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_129971069_130005829_130006034_130007359_130007470_130010981
ES.27306.29	chr5	+	933	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	89	2090	-50	77	multi-exon	FALSE	canonical	3	775	junction_1	60.5	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTCAACTAAAGTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	129970899	130011497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.3	chr5	+	212	1	Intergenic	novelGene_22749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129967428	129967640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129967400_129967600
ES.27306.30	chr5	+	2928	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_3	383.383474981498	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGTTGTGTTTTATTT	NA	False	NA	42	True	AATATA	-15	NA	129970899	130013585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010981_130012194_130012286
ES.27306.31	chr5	+	930	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	-49	311	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	443.5	661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTGCAGAACTTACTGT	NA	False	NA	NA	False	AATAAA	-20	NA	129970900	130011731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129970971_130007359_130007470_130010981
ES.27306.32	chr5	+	1545	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	90	1477	-49	690	multi-exon	FALSE	canonical	3	775	junction_1	60.5	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACACATGTGTTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	129970900	130012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.33	chr5	+	6386	4	NNC	ENSMUSG00000066735.9	novel	650	3	NA	NA	-48	1424	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	422.378450628764	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTAGGACTTGGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	129970901	130016957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971069_129976159_129976293_130007359_130007470_130010981
ES.27306.34	chr5	+	3456	5	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.957924127111	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTTGTGTTTTATT	NA	False	NA	41	True	AATATA	-14	NA	129970902	130013584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971069_130000437_130000811_130005829_130006034_130007359_130007470_130010981
ES.27306.35	chr5	+	3135	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	421.907836170676	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGTTGTGTTTTATTT	NA	False	NA	42	True	AATATA	-15	NA	129970902	130013585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_129971561_129971679_130007359_130007470_130010981
ES.27306.36	chr5	+	820	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-47	4036	-47	77	multi-exon	FALSE	canonical	3	56	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTCAACTAAAGTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	129970902	130011497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130010981
ES.27306.37	chr5	+	3329	5	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-38	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	383.808220339273	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTTGTGTTTTATT	NA	False	NA	41	True	AATATA	-14	NA	129970911	130013584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_129971561_129971679_130005829_130006034_130007359_130007470_130010981
ES.27306.38	chr5	+	1004	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-48	-306	-30	306	multi-exon	FALSE	canonical	3	55	junction_1	420.5	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCACCCCTGCAGAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	129970919	130011726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971069_130007359_130007470_130010981
ES.27306.39	chr5	+	4887	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	396.944160640595	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTGTGCTGCCATCG	NA	False	NA	9	True	AATAAA	-16	NA	129970921	130015529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010981_130014485_130014540
ES.27306.4	chr5	+	3248	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	-45	-91	-45	91	multi-exon	FALSE	canonical	3	775	junction_1	60.5	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTTATAAAACTGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	129970765	130013678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.40	chr5	+	4787	4	NNC	ENSMUSG00000066735.9	novel	607	4	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_3	383.383474981498	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970986	130015531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010981_130012194_130012286
ES.27306.41	chr5	+	2937	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	387.5	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGTGTTTTATTTG	NA	False	NA	43	True	AATATA	-16	NA	129971004	130013586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129971207_130007359_130007470_130010961
ES.27306.42	chr5	+	2741	1	Intergenic	novelGene_22751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	129978172	129980913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_129978200_129980900
ES.27306.43	chr5	+	605	1	Intergenic	novelGene_22754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	629	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACATAATACCAACATT	NA	False	NA	NA	False	NA	NA	NA	130002122	130002727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130002100_130002700
ES.27306.44	chr5	+	1527	2	ISM	ENSMUSG00000066735.9	ENSMUST00000202486.2	649	3	852	-404	852	305	3prime_fragment	FALSE	canonical	3	896	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCCACCCCTGCAGAACT	NA	False	NA	NA	False	AATAAA	-14	NA	130006686	130011725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130007470_130010981
ES.27306.5	chr5	+	5103	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	-45	-1946	-45	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970765	130015533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971207_130007359_130007470_130010981
ES.27306.6	chr5	+	2885	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	443.5	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGCCTGTTGTGTTTT	NA	False	NA	38	True	AATATA	-11	NA	129970795	130013581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129970971_130007359_130007470_130010981
ES.27306.7	chr5	+	4777	3	NNC	ENSMUSG00000066735.9	novel	3112	3	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	443.5	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970855	130015533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_129970971_130007359_130007470_130010981
ES.27306.8	chr5	+	4868	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-107	-4111	50	-2	multi-exon	FALSE	canonical	3	55	junction_1	420.5	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTGCTGCCATCGTT	NA	False	NA	11	True	AATAAA	-18	NA	129970860	130015531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971069_130007359_130007470_130010981
ES.27306.9	chr5	+	2910	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-94	-2166	63	-1	multi-exon	FALSE	canonical	3	55	junction_1	420.5	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGTGTTTTATTTG	NA	False	NA	43	True	AATATA	-16	NA	129970873	130013586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_129971069_130007359_130007470_130010981
ES.27307.1	chr5	-	4379	4	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-67	1	intron_retention	FALSE	canonical	3	1106	junction_3	27.0842307543625	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGTAGTTTTAAGTGAA	NA	False	NA	-1	True	ATTAAA	-23	NA	129856344	129842620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129846449_129847669_129847805_129848539_129848697_129856085
ES.27307.10	chr5	-	3716	1	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-1	1367	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATTTCATGTGTATG	NA	False	NA	NA	False	NA	NA	NA	129856278	129852562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129852600_129856300
ES.27307.11	chr5	-	547	1	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-22	692	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGGTGTTAAATCTTT	NA	False	NA	NA	False	AATAAA	-32	NA	129856299	129855752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129855800_129856300
ES.27307.12	chr5	-	368	2	NNC	ENSMUSG00000029446.15	novel	2877	2	NA	NA	-35	678	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATAGCTTTAATTTG	NA	False	NA	NA	False	AATAAA	-18	NA	129856312	129855766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129855908_129856085
ES.27307.3	chr5	-	1156	6	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-75	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	439.778762561359	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGTAGTTTTAAGTGAA	NA	False	NA	-1	True	ATTAAA	-23	NA	129856352	129842620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856125
ES.27307.4	chr5	-	1536	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	196	1	-1	-1	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCAGTAGTTTTAAGTG	8953	False	NA	-3	True	ATTAAA	-21	NA	129864317	129842622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ES.27307.6	chr5	-	3861	5	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-74	-4	intron_retention	FALSE	canonical	3	674	junction_1	200.848823745622	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATTCAGTAGTTTTAA	NA	False	NA	-6	True	ATTAAA	-18	NA	129856351	129842625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129842963_129843482_129846449_129847669_129847805_129848539_129848697_129856085
ES.27307.8	chr5	-	1264	7	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	-38	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	502.780076728937	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGATTCAGTAGTTTT	NA	False	NA	-8	True	ATTAAA	-16	NA	129856315	129842627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129853893_129854006_129856085
ES.27308.1	chr5	-	159	2	Antisense	novelGene_ENSMUSG00000107118.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATTAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	129982010	129873556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129873635_129981929
ES.27308.10	chr5	-	1843	5	NIC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-15	599	intron_retention	FALSE	canonical	3	15	junction_3	3.19178633370093	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	NA	False	NA	NA	False	NA	NA	NA	129902961	129894471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_129894912_129895036_129895867_129898301_129898368_129902056_129902112_129902509
ES.27308.11	chr5	-	166	1	Intergenic	novelGene_22743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	129896127	129895961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129896000_129896100
ES.27308.12	chr5	-	2230	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200832.2	2119	1	-82	-29	-82	29	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCCCAACTCCTCTA	NA	False	NA	NA	False	NA	NA	NA	129900900	129898670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129898700_129900900
ES.27308.13	chr5	-	185	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200832.2	2119	1	645	1289	645	-1289	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	129900173	129899988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129900000_129900200
ES.27308.14	chr5	-	144	2	Intergenic	novelGene_22744	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	129903724	129903328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129903431_129903682
ES.27308.15	chr5	-	3180	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200922.2	1540	1	-41	-1599	-41	1599	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAACAAAACACACT	NA	False	NA	NA	False	AAAAAG	-45	NA	129907970	129904790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129904800_129908000
ES.27308.16	chr5	-	909	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	6	0	6	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	2070	False	NA	-3	True	AATAAA	-18	NA	129916305	129909996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ES.27308.19	chr5	-	722	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2948.04895934017	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTAGCGTCCTT	2246	False	NA	-8	True	AATAAA	-13	NA	129916129	129910001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129910238_129911269_129911421_129912774_129913019_129916038
ES.27308.2	chr5	-	259	1	Intergenic	novelGene_22742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACCTCCTGGAAAGGG	6499	False	NA	NA	False	NA	NA	NA	129880962	129880703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129880700_129881000
ES.27308.20	chr5	-	669	4	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	303	-2	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_3	2936.74116439748	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTAGCGTCCTT	2564	False	NA	-8	True	AATAAA	-13	NA	129915811	129910001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129910238_129911269_129911421_129912774_129913025_129915779
ES.27308.24	chr5	-	229	1	Intergenic	novelGene_22747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGACAGGGCTTCT	NA	False	NA	NA	False	AAGAAA	-28	NA	129921629	129921400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129921400_129921600
ES.27308.25	chr5	-	205	1	Antisense	novelGene_ENSMUSG00000034173.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGCCGAAGGAGTAGCA	NA	False	NA	NA	False	NA	NA	NA	129925905	129925700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_129925700_129925900
ES.27308.26	chr5	-	199	1	Intergenic	novelGene_22750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGGCAGGGGG	NA	False	NA	NA	False	NA	NA	NA	129968543	129968344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129968300_129968500
ES.27308.27	chr5	-	1627	1	Intergenic	novelGene_22752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAACTACAACTACAA	NA	False	NA	NA	False	NA	NA	NA	129982007	129980380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129980400_129982000
ES.27308.28	chr5	-	179	1	Intergenic	novelGene_22753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	129982011	129981832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_129981800_129982000
ES.27308.3	chr5	-	2833	8	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-5	3	intron_retention	FALSE	canonical	2	8	junction_7	4.77664385637157	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGACCTCATAAGATC	NA	False	NA	NA	False	NA	NA	NA	129902951	129892258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129902800
ES.27308.4	chr5	-	177	2	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-54620	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	129982010	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129892343_129981902
ES.27308.5	chr5	-	2249	10	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-169	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.25967446224258	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	129903115	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129896321_129896426_129898301_129898368_129902056_129902112_129902509_129902689_129903062
ES.27308.6	chr5	-	2441	8	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.20292766194652	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	129902949	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129901963_129902107_129902509
ES.27308.7	chr5	-	2349	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4979	12	1	-12	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	129902945	129892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
ES.27308.8	chr5	-	1505	9	NNC	ENSMUSG00000025537.13	novel	2374	10	NA	NA	2	-743	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	4.49305018890286	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGGTGAGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	129902944	129893004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129902800
ES.27308.9	chr5	-	1622	8	ISM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	4975	743	-3	-743	3prime_fragment	FALSE	canonical	3	15	junction_6	2.74791200881019	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGGTGAGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	129902949	129893004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509
ES.27309.1	chr5	+	175	1	Intergenic	novelGene_22755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCTTCAACTTCC	NA	False	NA	NA	False	NA	NA	NA	130020553	130020728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130020600_130020700
ES.2731.1	chr10	-	5438	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-290	-1123	-229	7	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTAGTGTCTTGAA	NA	False	NA	0	True	ATTAAA	-25	NA	44334973	44313165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.10	chr10	-	2660	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	15980	-1783	15980	409	3prime_fragment	FALSE	canonical	3	47	junction_2	4	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTCTCCTCTTCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	44317226	44313879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_44316239_44316654_44316784_44317054
ES.2731.11	chr10	-	2307	2	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	15988	193	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTCTCTGAAGTTTTGC	NA	False	NA	88	True	NA	NA	NA	44317218	44314095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_44316239_44317054
ES.2731.12	chr10	-	4440	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-310	-105	-249	105	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCATGTGTATATATGA	NA	False	NA	0	True	AATAAA	-35	NA	44334993	44314183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.13	chr10	-	4017	7	FSM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	-228	-1272	-228	-102	multi-exon	FALSE	canonical	0	0	junction_6	17.9814719456816	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAACAATTACCTCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	44333434	44314390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44333119
ES.2731.14	chr10	-	3911	7	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	-73	-102	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	17.9814719456816	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAACAATTACCTCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	44404570	44314390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44404361
ES.2731.15	chr10	-	3947	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-28	106	-28	-106	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGTTCAACAATTACC	NA	False	NA	NA	False	ATTAAA	-17	NA	44334711	44314394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.16	chr10	-	3437	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-312	900	-251	474	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGGCCATTCTTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	44334995	44315188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.17	chr10	-	3013	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	-16	1028	-16	346	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTATTTTTTCAATGAT	NA	False	NA	NA	False	ACTAAA	-15	NA	44334699	44315316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.18	chr10	-	4160	1	Intergenic	novelGene_2078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAAACATCAATTCTAGT	NA	False	NA	NA	False	AATAAA	-24	NA	44359147	44354987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44355000_44359100
ES.2731.2	chr10	-	5098	7	NNC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	-79	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	17.4515201502779	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTGTCTAGTGTCTTG	NA	False	NA	-2	True	ATTAAA	-23	NA	44404576	44313167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44404403
ES.2731.3	chr10	-	5172	7	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	-111	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	17.9814719456816	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTGTCTAGTGTCTTG	NA	False	NA	-2	True	ATTAAA	-23	NA	44404608	44313167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44404361
ES.2731.5	chr10	-	3256	2	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	15965	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGCTTGTCTAGTGTCT	NA	False	NA	-4	True	ATTAAA	-21	NA	44317241	44313169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_44316239_44317054
ES.2731.6	chr10	-	5816	5	NIC	ENSMUSG00000038151.14	novel	4025	7	NA	NA	14	2	intron_retention	FALSE	canonical	3	20	junction_4	3	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATGCTTGTCTAGTGTC	NA	False	NA	-5	True	ATTAAA	-20	NA	44334669	44313170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ES.2731.7	chr10	-	5181	7	FSM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	-173	-2491	-173	1	multi-exon	FALSE	canonical	0	0	junction_6	17.9814719456816	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATGCTTGTCTAGTGT	NA	False	NA	-6	True	ATTAAA	-19	NA	44333379	44313171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44333119
ES.27310.1	chr5	+	3373	1	Intergenic	novelGene_22756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTCTAGTCTATGGT	2629	False	NA	NA	False	AATAAA	-14	NA	130032019	130035392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130032000_130035400
ES.27311.1	chr5	+	5841	2	Antisense	novelGene_ENSMUSG00000025533.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130046002	130052071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_130047445_130047672
ES.27311.2	chr5	+	3739	3	Antisense	novelGene_ENSMUSG00000025533.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAAGCTTTCATGTGGT	NA	False	NA	NA	False	NA	NA	NA	130046002	130052098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_130047445_130047672_130049065_130051193
ES.27311.3	chr5	+	6096	1	Antisense	novelGene_ENSMUSG00000025533.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAAGCTTTCATGTGGT	NA	False	NA	NA	False	NA	NA	NA	130046002	130052098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_130046000_130052100
ES.27312.1	chr5	-	3869	27	Fusion	ENSMUSG00000025534.18_ENSMUSG00000025533.16	novel	2088	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	90.8866906237892	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130053157	130017851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130040429_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
ES.27312.12	chr5	-	2390	11	NIC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	37.9869714507487	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATGAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	130031706	130017879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130018529_130018857_130018994_130022258_130022436_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.13	chr5	-	3223	11	NIC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	2	-16	intron_retention	FALSE	canonical	3	83	junction_6	17.3979883894662	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATGAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	130031667	130017879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.15	chr5	-	2862	10	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	192	3227	8	-2657	5prime_fragment	FALSE	canonical	3	83	junction_4	18.0212494599782	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGTAGCAA	NA	False	NA	NA	False	NA	NA	NA	130031698	130021078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.16	chr5	-	699	2	NIC	ENSMUSG00000025534.18	novel	2038	4	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	130031706	130028470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130028911_130031447
ES.27312.17	chr5	-	1774	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	48	2	12	-2	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGGAGAGATGTGTCA	NA	False	NA	NA	False	CATAAA	-19	NA	130053174	130040100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.18	chr5	-	1584	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	4	236	4	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTCTGCCTGTGGTCCT	NA	False	NA	0	True	AATAAA	-31	NA	130053218	130040334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.19	chr5	-	1695	16	NIC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	102	junction_3	47.4943739358206	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCTTCTGCCTGTGGTC	NA	False	NA	-2	True	AATAAA	-29	NA	130053191	130040336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.2	chr5	-	2722	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	-35	0	-35	0	multi-exon	FALSE	canonical	3	83	junction_6	16.6092675514317	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031925	130017851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.20	chr5	-	1556	18	NNC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.2361377366807	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATATGCTTCTGCCTGT	NA	False	NA	-6	True	AATAAA	-25	NA	130053163	130040340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041215_130041249_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.22	chr5	-	2313	10	NNC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-2102	0	intron_retention	FALSE	canonical	0	0	junction_8	100.907120232322	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130045665	130040344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130043781_130044937_130045016_130045136
ES.27312.24	chr5	-	1993	16	NIC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	-4	0	intron_retention	FALSE	canonical	1	102	junction_3	47.6177371248245	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053190	130040344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.26	chr5	-	1521	15	NIC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-5	0	intron_retention	FALSE	canonical	1	3	junction_14	83.0892377421494	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053163	130040344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130052882
ES.27312.27	chr5	-	1632	15	NIC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-5	0	intron_retention	FALSE	canonical	2	65	junction_3	57.5774987937731	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053163	130040344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
ES.27312.28	chr5	-	1605	17	NIC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_16	77.2141654345237	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053163	130040344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053048
ES.27312.29	chr5	-	1526	17	NNC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.5928740010823	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACCGAGACAAGCATA	NA	False	NA	-19	True	AATAAA	-12	NA	130053202	130040353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045192_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ES.27312.3	chr5	-	2598	12	NNC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	36.0933134074342	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031699	130017851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031345
ES.27312.30	chr5	-	1082	10	NNC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	-1412	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	100.061215831011	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACCGAGACAAGCATA	NA	False	NA	-19	True	AATAAA	-12	NA	130044975	130040353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043781_130044937
ES.27312.4	chr5	-	3706	7	NIC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	2152	0	intron_retention	FALSE	canonical	3	83	junction_5	20.3114636487762	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130029517	130017851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130028911_130029201
ES.27312.5	chr5	-	2479	12	NNC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	35.8578460586654	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031715	130017851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130018529_130018857_130018994_130022258_130022436_130024320_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.6	chr5	-	2124	11	FSM	ENSMUSG00000025534.18	ENSMUST00000201801.4	2272	11	149	-1	149	1	multi-exon	FALSE	canonical	3	14	junction_9	32.1249124512426	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAACTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	130031520	130017862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029597_130029784_130031447
ES.27312.7	chr5	-	2690	12	NNC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	35.9287633109999	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	130031701	130017863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130018733_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.8	chr5	-	2323	11	NIC	ENSMUSG00000025534.18	novel	2687	12	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38.1622850468889	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	130031715	130017863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130018529_130018857_130018994_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ES.27312.9	chr5	-	2932	10	NIC	ENSMUSG00000025534.18	novel	2272	11	NA	NA	11	-16	intron_retention	FALSE	canonical	3	83	junction_6	15.073482561877	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATGAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	130031658	130017879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130029784_130031447
ES.27313.1	chr5	+	1505	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	1	-14	1	14	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTATGTTTGTGTGTT	NA	False	NA	19	True	AAAACA	-15	NA	130058131	130089644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ES.27313.10	chr5	+	1382	5	NIC	ENSMUSG00000025532.14	novel	669	6	NA	NA	21	-28	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	170.510080347175	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAACCAAC	NA	False	NA	-23	True	NA	NA	NA	130058204	130089602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130058336_130063752_130063790_130066660_130066760_130077766_130077825_130088545
ES.27313.2	chr5	+	1520	6	NNC	ENSMUSG00000025532.14	novel	1492	6	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	143.043210254804	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCTGGTATGTTTGTGT	NA	False	NA	16	True	AAAACA	-12	NA	130058131	130089641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088527
ES.27313.3	chr5	+	1396	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	1	-466	1	12	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGTATGTTTGTGTG	NA	False	NA	17	True	AAAACA	-13	NA	130058143	130089642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
ES.27313.4	chr5	+	1576	6	FSM	ENSMUSG00000025532.14	ENSMUST00000156729.2	669	6	-38	-869	3	12	multi-exon	FALSE	canonical	3	25	junction_1	131.765549367048	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGTATGTTTGTGTG	NA	False	NA	17	True	AAAACA	-13	NA	130058145	130089642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130058336_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ES.27313.6	chr5	+	1339	6	NNC	ENSMUSG00000025532.14	novel	1492	6	NA	NA	5	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.416874878795	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAACCAAC	NA	False	NA	-23	True	NA	NA	NA	130058173	130089602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088627
ES.27313.7	chr5	+	623	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	60	809	7	48	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCACAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	130058190	130088821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ES.27313.8	chr5	+	519	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	57	355	16	48	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCACAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	130058199	130088821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
ES.27314.1	chr5	-	2443	1	Intergenic	novelGene_22757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAAAAAAAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	130087653	130085210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130085200_130087700
ES.27315.1	chr5	-	178	1	Intergenic	novelGene_22758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	130090234	130090056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130090100_130090200
ES.27316.1	chr5	+	2060	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	-7	-3	-7	3	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTCCCGTTTTCAGTGC	NA	False	NA	20	True	AATAAA	-21	NA	130108203	130164573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ES.27316.3	chr5	+	4629	3	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	29	4538	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	79.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTTGTGTGGTTATAA	NA	False	NA	NA	False	NA	NA	NA	130108239	130135429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130108503_130130430_130132047_130132679
ES.27316.4	chr5	+	2220	6	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	31	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.196835363806	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTCCCGTTTTCAGTGC	NA	False	NA	20	True	AATAAA	-21	NA	130108241	130164573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130163850
ES.27316.5	chr5	+	2058	7	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	73	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.3686549703822	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGTCCCGTTTTCAGT	NA	False	NA	18	True	AATAAA	-19	NA	130108283	130164571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158100_130158176_130158343_130158400_130163299_130163340_130164048
ES.27316.6	chr5	+	6877	5	NIC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	73	0	intron_retention	FALSE	canonical	3	139	junction_2	11.9791485507109	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	False	NA	17	True	AATAAA	-18	NA	130108283	130164570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130163340_130164048
ES.27316.7	chr5	+	2626	4	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	74	2671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.01387685344754	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAACTCTGCTTCATTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	130108284	130133562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130108503_130117992_130119315_130130430_130131377_130133422
ES.27316.8	chr5	+	1894	4	NNC	ENSMUSG00000034118.16	novel	2050	6	NA	NA	77	13429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.7122494495983	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTGGTTTCAAATC	NA	False	NA	NA	False	AATAAA	-11	NA	130108287	130144320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130108503_130130430_130131377_130143308_130143508_130143786
ES.27317.1	chr5	-	785	1	Intergenic	novelGene_22759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCTTAGACCAGAGCC	5187	False	NA	NA	False	NA	NA	NA	130167414	130166629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130166600_130167400
ES.27318.1	chr5	+	1563	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	-2	2730	-2	582	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTGCTCCTTGGTCT	1853	False	NA	NA	False	AAGAAA	-14	NA	130173699	130181917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
ES.27318.2	chr5	+	3585	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	17	689	17	-689	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGCCTGTTTGATCC	1872	False	NA	NA	False	AATAAA	-21	NA	130173718	130183958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
ES.27318.3	chr5	+	3286	4	NNC	ENSMUSG00000034110.9	novel	4291	4	NA	NA	19	-973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.89949493661167	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGATGTGGTTCCATG	1874	False	NA	NA	False	AATAAA	-16	NA	130173720	130183674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130174068_130176907_130177065_130180511_130180691_130181071
ES.27318.4	chr5	+	3652	4	NIC	ENSMUSG00000034110.9	novel	4291	4	NA	NA	24	-692	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.9566858950296	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTTGGCCTGTTTGA	1879	False	NA	NA	False	AATAAA	-18	NA	130173725	130183955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130174068_130176817_130177065_130180511_130180691_130181071
ES.27318.5	chr5	+	3434	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	64	793	1	-793	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGGCTCTCTCACGA	1919	False	NA	NA	False	AATAAA	-13	NA	130173765	130183854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
ES.27319.1	chr5	-	2480	1	Intergenic	novelGene_22760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACCAAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	130179764	130177284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130177300_130179800
ES.2732.1	chr10	+	3320	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-505	8118	-505	-8118	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGTTTCCAACAATGAG	NA	False	NA	10	True	AATAAA	-22	NA	44942793	45035176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.10	chr10	+	4556	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-25	6402	-25	-6402	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGGAACTCCCTAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	44943273	45036892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.11	chr10	+	2743	15	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-17	-8205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.221204744417	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGCTTTAGTTTTGGT	NA	False	NA	29	True	AATAAA	-14	NA	44943281	45035089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971291_44973494_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.12	chr10	+	2149	11	NIC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-16	-8203	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	246.365906732243	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTTTAGTTTTGGTTC	NA	False	NA	31	True	AATAAA	-16	NA	44943282	45035091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44943472_44948148_44948224_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.14	chr10	+	2614	14	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-1	-8122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	302.674019582417	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGTTAGTTTCCAACAA	NA	False	NA	6	True	AATAAA	-18	NA	44943297	45035172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44943472_44948154_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.15	chr10	+	1023	6	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	13	69493	13	-69493	5prime_fragment	FALSE	canonical	3	732	junction_5	90.9804374577304	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTGCTTATGGTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	44943311	44973801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488
ES.2732.16	chr10	+	2541	15	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	13	-8377	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.184300749305	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAATATTAGACTCCT	NA	False	NA	3	True	ACTAAA	-14	NA	44943311	45034917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44943476_44948154_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.18	chr10	+	2655	16	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	14	-8205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	213.873690657723	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGCTTTAGTTTTGGT	NA	False	NA	29	True	AATAAA	-14	NA	44943312	45035089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991186_44991244_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.2	chr10	+	3030	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-316	8219	-316	-8219	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTATTTAAGAGTGGGAG	NA	False	NA	15	True	AATAAA	-40	NA	44942982	45035075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.20	chr10	+	3782	15	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	4299	-7216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.184300749305	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGTTGCAACACAGATC	NA	False	NA	4	True	ATTAAA	-20	NA	44947597	45036078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44947836_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.21	chr10	+	2348	12	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	25458	8204	25458	-8204	3prime_fragment	FALSE	canonical	3	732	junction_2	46.4610385072649	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGCTTTAGTTTTGGTT	NA	False	NA	30	True	AATAAA	-15	NA	44968756	45035090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.22	chr10	+	1886	9	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	40566	-8206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	267.446256283389	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGGCTTTAGTTTTGG	NA	False	NA	28	True	AATAAA	-13	NA	44983864	45035088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029279_45031606_45031769_45034327
ES.2732.23	chr10	+	2672	1	Intergenic	novelGene_2082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGTGCGATTAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	45013218	45015890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45013200_45015900
ES.2732.24	chr10	+	3999	1	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	91555	4442	91555	-4442	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCATGAGAGTGATTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	45034853	45038852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_45034900_45038900
ES.2732.3	chr10	+	2861	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-297	8369	-297	-8369	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGACTCCTGAATTCGT	NA	False	NA	11	True	ACTAAA	-22	NA	44943001	45034925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.4	chr10	+	3928	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-213	7218	-213	-7218	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCAGAGTTGCAACACAGA	NA	False	NA	2	True	ATTAAA	-18	NA	44943085	45036076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.5	chr10	+	3457	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-121	7597	-121	-7597	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTTGGTTACAGAGT	NA	False	NA	NA	False	NA	NA	NA	44943177	45035697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.6	chr10	+	5438	14	NIC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-103	-8122	intron_retention	FALSE	canonical	3	732	junction_5	69.3637184974031	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGTTAGTTTCCAACAA	NA	False	NA	6	True	AATAAA	-18	NA	44943195	45035172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45029283_45031611_45031769_45034327
ES.2732.7	chr10	+	3674	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	-99	7358	-99	-7358	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTATGTTCTGGGTGT	NA	False	NA	NA	False	AATACA	-22	NA	44943199	45035936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.8	chr10	+	4960	14	NIC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-42	-8203	intron_retention	FALSE	canonical	3	732	junction_4	69.844205326938	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTTTAGTTTTGGTTC	NA	False	NA	31	True	AATAAA	-16	NA	44943256	45035091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.2732.9	chr10	+	1898	10	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	-29	-8203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	259.659368508669	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTTTAGTTTTGGTTC	NA	False	NA	31	True	AATAAA	-16	NA	44943269	45035091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_44943472_44948148_44948200_44991292_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ES.27320.1	chr5	-	163	1	Intergenic	novelGene_22761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	130188370	130188207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130188200_130188400
ES.27321.1	chr5	+	2685	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTTTTGTTTTGTTTCT	NA	False	NA	20	True	AATAAA	-42	NA	130200645	130243182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.10	chr5	+	4949	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	17	2299	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCCAAGTACGTTGACA	NA	False	NA	NA	False	GATAAA	-14	NA	130200681	130245482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.11	chr5	+	9218	3	NNC	ENSMUSG00000025340.15	novel	828	7	NA	NA	18	-9919	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130200682	130210243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130205589_130205884_130208884_130208930
ES.27321.13	chr5	+	2458	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	33	-1	intron_retention	FALSE	canonical	1	2	junction_3	62.0388291840732	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	False	NA	15	True	AATAAA	-37	NA	130200697	130243177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.14	chr5	+	4218	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	47	-2	intron_retention	FALSE	canonical	3	67	junction_3	39.4585807123968	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200711	130243176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130239357_130240702_130240960_130241674
ES.27321.15	chr5	+	4836	3	Intergenic	novelGene_22762	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCCAAAAAAAAAAA	136	False	NA	NA	False	NA	NA	NA	130205070	130210243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130205593_130205884_130208875_130208919
ES.27321.17	chr5	+	2195	2	Intergenic	novelGene_22763	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGCCAAAAAAAAAAA	3068	False	NA	NA	False	NA	NA	NA	130208002	130210243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130208881_130208926
ES.27321.18	chr5	+	161	1	Intergenic	novelGene_22764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGTAGATTTT	NA	False	NA	NA	False	NA	NA	NA	130235526	130235687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130235500_130235700
ES.27321.19	chr5	+	3075	4	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	19931	505	39	-218	3prime_fragment	FALSE	canonical	3	169	junction_2	13.9124245031395	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGACATTGGCACTAAC	NA	False	NA	NA	False	AAAAAG	-22	NA	130235932	130242673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.20	chr5	+	2689	4	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	20066	756	174	-469	3prime_fragment	FALSE	canonical	3	169	junction_2	13.9124245031395	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCCCCAGTGTGAAATAA	NA	False	NA	NA	False	TATAAA	-32	NA	130236067	130242422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.3	chr5	+	2585	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_4	66.0080390898699	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGATTGGTTTTGTTTT	NA	False	NA	14	True	AATAAA	-36	NA	130200654	130243176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.4	chr5	+	4189	7	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_4	69.9190007556363	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	False	NA	15	True	AATAAA	-37	NA	130200659	130243177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130237526_130239357_130240702_130240960_130241674
ES.27321.5	chr5	+	2748	10	NNC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_1	76.1048659238288	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	False	NA	15	True	AATAAA	-37	NA	130200662	130243177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130200736_130204981_130205067_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.6	chr5	+	2123	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	41	526	15	-234	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGAGCTTTAACA	NA	False	NA	NA	False	AAAAAG	-6	NA	130200679	130242657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.7	chr5	+	1857	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-503	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	37.9637985454564	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCTATGTTGAAATGAA	NA	False	NA	NA	False	GATAAA	-12	NA	130200679	130242388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.8	chr5	+	2287	7	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-7	intron_retention	FALSE	canonical	0	0	junction_1	68.0612469275529	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTATCTGATTGGTTTT	NA	False	NA	9	True	AATAAA	-31	NA	130200679	130243171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ES.27321.9	chr5	+	3992	8	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	15	-1	intron_retention	FALSE	canonical	3	67	junction_3	40.4394230766898	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	False	NA	15	True	AATAAA	-37	NA	130200679	130243177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130240960_130241674
ES.27322.1	chr5	+	3725	7	FSM	ENSMUSG00000053094.16	ENSMUST00000065329.13	3607	7	-202	84	-202	15	multi-exon	FALSE	canonical	2	4	junction_1	200.953283681114	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCCGGATTGGTGT	6224	False	NA	29	True	AATAAA	-30	NA	130248382	130272522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130248761_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.10	chr5	+	3388	6	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	220.985610391265	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCCGTTTTAATTCCAG	9018	False	NA	17	True	AATAAA	-18	NA	130251176	130272510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130269188_130269333_130270118
ES.27322.11	chr5	+	3499	6	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	1	-2198	intron_retention	FALSE	canonical	3	519	junction_3	21.9125534796837	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGGTCCTGTGATGCA	9018	False	NA	9	True	TATAAA	-11	NA	130251176	130270309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130258289_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.12	chr5	+	1467	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	7	-2203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.162800415784	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGAAATTGGTCCTGTG	9024	False	NA	4	True	TATAAA	-6	NA	130251182	130270304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130258588_130258696_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.13	chr5	+	3379	6	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	217.721289726108	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	9028	False	NA	12	True	AATAAA	-13	NA	130251186	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.14	chr5	+	3693	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	14	-137	14	38	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTACTGAGGTGACC	9031	False	NA	NA	False	TTTAAA	-34	NA	130251189	130272644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.15	chr5	+	3483	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	248.162800415784	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	9031	False	NA	14	True	AATAAA	-15	NA	130251189	130272507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130258588_130258728_130260807_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.16	chr5	+	3491	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	198.084718127259	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGGTTTGCCGTTTTA	9040	False	NA	10	True	AATAAA	-11	NA	130251198	130272503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260647_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.17	chr5	+	3702	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	23	-2	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_3	204.332585643004	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	9040	False	NA	12	True	AATAAA	-13	NA	130251198	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130261039_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.18	chr5	+	3472	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	206.151845330895	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9040	False	NA	11	True	AATAAA	-12	NA	130251198	130272504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267159_130267272_130269188_130269333_130270118
ES.27322.19	chr5	+	2896	4	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	23	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	270.824666527996	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9040	False	NA	11	True	AATAAA	-12	NA	130251198	130272504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130265643_130265795_130269188_130269333_130270118
ES.27322.2	chr5	+	1388	7	FSM	ENSMUSG00000053094.16	ENSMUST00000065329.13	3607	7	-70	2289	-70	-2190	multi-exon	FALSE	canonical	2	4	junction_1	200.953283681114	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGATGCACGTGCTTT	6356	False	NA	17	True	TATAAA	-19	NA	130248514	130270317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130248761_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.20	chr5	+	3745	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.162800415784	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9040	False	NA	11	True	AATAAA	-12	NA	130251198	130272504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130258588_130258790_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.21	chr5	+	1555	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	24	-2192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.162800415784	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGATGCACGTGCT	9041	False	NA	15	True	TATAAA	-17	NA	130251199	130270315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130258588_130258790_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.22	chr5	+	2630	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	24	916	24	-916	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCACTGTAGTTAT	9041	False	NA	NA	False	AAAACA	-36	NA	130251199	130271591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.24	chr5	+	3460	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.991815301739	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGCCGTTTTAATT	9042	False	NA	13	True	AATAAA	-14	NA	130251200	130272506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118_130271594_130271677
ES.27322.25	chr5	+	3501	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	204.049830515326	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9042	False	NA	11	True	AATAAA	-12	NA	130251200	130272504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269229_130269333_130270118
ES.27322.26	chr5	+	3194	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	191.991815301739	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	9043	False	NA	12	True	AATAAA	-13	NA	130251201	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118_130271326_130271673
ES.27322.27	chr5	+	4955	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	29	1451	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	191.991815301739	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCAAGGTACATTATAT	9046	False	NA	NA	False	AATAAA	-20	NA	130251204	130274057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118_130272781_130272916
ES.27322.28	chr5	+	4106	8	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	33	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.016534219257	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTTGGTTTGCCGTTTT	9050	False	NA	9	True	AATAAA	-10	NA	130251208	130272502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251859_130253094_130253224_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.29	chr5	+	2021	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	33	1516	33	-1516	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGCATTCATTTCT	9050	False	NA	NA	False	AATACA	-18	NA	130251208	130270991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.3	chr5	+	3278	6	NIC	ENSMUSG00000053094.16	novel	3607	7	NA	NA	-58	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	266.715278902428	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	6368	False	NA	12	True	AATAAA	-13	NA	130248526	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130248761_130258289_130258468_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.30	chr5	+	1347	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	33	-2199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	202.438468017651	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATTGGTCCTGTGATGC	9050	False	NA	8	True	TATAAA	-10	NA	130251208	130270308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251414_130258280_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.31	chr5	+	3390	6	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	34	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	216.453782595731	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	9051	False	NA	12	True	AATAAA	-13	NA	130251209	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130270118
ES.27322.33	chr5	+	3537	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	40	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.438468017651	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGCCGTTTTAATTCCA	9057	False	NA	16	True	AATAAA	-17	NA	130251215	130272509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251381_130258251_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.34	chr5	+	3061	5	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	42	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	237.149082857177	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTTTGCCGTTTTAA	9059	False	NA	11	True	AATAAA	-12	NA	130251217	130272504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130251414_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.36	chr5	+	3154	5	ISM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	9418	2	9418	-2	3prime_fragment	FALSE	canonical	3	519	junction_2	21.1231508066387	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	3543	False	NA	12	True	AATAAA	-13	NA	130260593	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.37	chr5	+	518	1	NIC	ENSMUSG00000053094.16	novel	3607	7	NA	NA	9616	427	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAATGTTTTGCATGGG	3741	False	NA	NA	False	NA	NA	NA	130260791	130261309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130260800_130261300
ES.27322.38	chr5	+	3764	5	NNC	ENSMUSG00000053094.16	novel	3607	7	NA	NA	13004	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	237.149082857177	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTTGCCGTTTTAAT	7129	False	NA	12	True	AATAAA	-13	NA	130264179	130272505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130264543_130265108_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.39	chr5	+	8321	1	Genic_Genomic	ENSMUSG00000053094.16	novel	NA	NA	NA	NA	21002	7892	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGGGTTGAGGGTGGG	NA	False	NA	NA	False	AAGAAA	-15	NA	130272177	130280498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_130272200_130280500
ES.27322.4	chr5	+	3644	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	-59	-15	-59	15	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCCGGATTGGTGT	8958	False	NA	29	True	AATAAA	-30	NA	130251116	130272522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.40	chr5	+	1408	1	Intergenic	novelGene_22765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCCAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	130278010	130279418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130278000_130279400
ES.27322.5	chr5	+	1438	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	-58	2190	-58	-2190	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGATGCACGTGCTTT	8959	False	NA	17	True	TATAAA	-19	NA	130251117	130270317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.6	chr5	+	4048	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	197.983164267403	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	8984	False	NA	14	True	AATAAA	-15	NA	130251142	130272507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130251859_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27322.8	chr5	+	6811	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	-3241	0	3142	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCATTGGTCCTGG	9017	False	NA	NA	False	NA	NA	NA	130251175	130275748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ES.27323.1	chr5	-	3720	4	Antisense	novelGene_ENSMUSG00000106751.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	130267105	130255202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_130258463_130260589_130260879_130265640_130265791_130267084
ES.27323.2	chr5	-	3893	1	Antisense	novelGene_ENSMUSG00000053094.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130263697	130259804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_130259800_130263700
ES.27324.1	chr5	-	4181	2	Antisense	novelGene_ENSMUSG00000053094.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130272386	130267420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_130269332_130270116
ES.27324.2	chr5	-	5649	1	Antisense	novelGene_ENSMUSG00000053094.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130273071	130267422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_130267400_130273100
ES.27325.1	chr5	-	1566	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	-1	-17	-1	17	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGCTTCCCCTTTGCTC	NA	False	NA	17	True	AATAAA	-34	NA	130284372	130274554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ES.27325.10	chr5	-	1578	5	FSM	ENSMUSG00000025337.11	ENSMUST00000139211.5	815	5	-92	-671	-5	-3	multi-exon	FALSE	canonical	2	6	junction_4	362.983728974179	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284338	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130283984
ES.27325.11	chr5	-	2579	5	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	432.585540673749	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284338	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130275303_130275818_130277292_130279654_130279856_130282779_130282910_130284291
ES.27325.14	chr5	-	2509	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-2	-4	intron_retention	FALSE	canonical	2	14	junction_4	359.544416588549	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGGCTTGCATTTC	NA	False	NA	-4	True	AATAAA	-13	NA	130284335	130274575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130284152_130284291
ES.27325.18	chr5	-	1450	5	NIC	ENSMUSG00000025337.11	novel	815	5	NA	NA	-24	-4	combination_of_known_splicesites	FALSE	canonical	2	23	junction_4	355.675765269437	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGGCTTGCATTTC	NA	False	NA	-4	True	AATAAA	-13	NA	130284270	130274575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282851_130283984
ES.27325.19	chr5	-	1175	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	-12	385	-12	289	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCGTCTGCCTTTCTAG	NA	False	NA	0	True	AATACA	-22	NA	130284383	130274956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ES.27325.2	chr5	-	4469	3	FSM	ENSMUSG00000025337.11	ENSMUST00000125625.2	915	3	-1402	-2152	5	-1	multi-exon	FALSE	canonical	3	837	junction_2	31.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTTGCATTTCTAG	NA	False	NA	-1	True	AATAAA	-16	NA	130284328	130274572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_130277292_130279654_130279856_130282779
ES.27325.3	chr5	-	3232	5	NIC	ENSMUSG00000025337.11	novel	435	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	2	14	junction_4	352.986543652871	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTTGCATTTCTA	NA	False	NA	-2	True	AATAAA	-15	NA	130284373	130274573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130277292_130279654_130279856_130282779_130282910_130284050_130284152_130284291
ES.27325.4	chr5	-	2728	6	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	4	junction_2	399.728207661156	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284342	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130275303_130275818_130277031_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ES.27325.5	chr5	-	1438	5	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	337.38924108513	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284270	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130275303_130277126_130277286_130279654_130279856_130282779_130282910_130284050
ES.27325.7	chr5	-	1601	5	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-32	-3	intron_retention	FALSE	canonical	0	0	junction_4	365.563520472161	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284403	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282934_130284050
ES.27325.8	chr5	-	1449	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	21	junction_4	356.535411985962	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284334	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282851_130284050
ES.27325.9	chr5	-	1531	6	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	420.934009079808	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCTTGCATTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	130284270	130274574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_130275303_130275818_130275965_130277126_130277292_130279654_130279856_130282779_130282851_130284050
ES.27326.1	chr5	+	2533	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	-22	-401	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGTCCTTACCTTCC	3490	False	NA	25	True	AATAAA	-28	NA	130284437	130370003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.10	chr5	+	2505	16	NNC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	8	-414	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	92.9398849914407	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGAGCTACTGGCTTT	3520	False	NA	12	True	AATAAA	-15	NA	130284467	130369990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296720_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.11	chr5	+	6219	15	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	8	-415	intron_retention	FALSE	canonical	3	48	junction_1	70.8085951199227	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGAGCTACTGGCTT	3520	False	NA	11	True	AATAAA	-14	NA	130284467	130369989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.12	chr5	+	2640	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	404	0	-404	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTTTGTCCTTACCT	4928	False	NA	22	True	AATAAA	-25	NA	130285875	130370000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.13	chr5	+	1975	10	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	96.9682396776019	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGTCTCAAATG	4934	False	NA	NA	False	NA	NA	NA	130285881	130314227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130313523
ES.27326.14	chr5	+	4535	10	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	12	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	99.0858213873206	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAAATGCCTTTAAAAA	4940	False	NA	NA	False	NA	NA	NA	130285887	130314237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130310967
ES.27326.15	chr5	+	3406	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	12	-374	12	374	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTGTTACATTGCAT	4940	False	NA	NA	False	NA	NA	NA	130285887	130370778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.16	chr5	+	2570	16	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	13	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2724135847746	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTACTGGCTTTGTCCT	4941	False	NA	17	True	AATAAA	-20	NA	130285888	130369995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287825_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.2	chr5	+	2401	15	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	-22	-410	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	97.5034274646124	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTACTGGCTTTGTCC	3490	False	NA	16	True	AATAAA	-19	NA	130284437	130369994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130284487_130287773_130287896_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.20	chr5	+	4097	7	ISM	ENSMUSG00000056310.15	ENSMUST00000100662.10	1867	8	19	-4	19	4	intron_retention	FALSE	canonical	3	273	junction_6	27.5479380151925	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGACTTAGGCTGGGTT	4947	False	NA	NA	False	TTTAAA	-9	NA	130285894	130306594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461
ES.27326.22	chr5	+	2671	11	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	26	51410	26	4767	5prime_fragment	FALSE	canonical	3	235	junction_10	34.226305672684	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	4954	False	NA	NA	False	NA	NA	NA	130285901	130318994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693
ES.27326.23	chr5	+	1859	8	NNC	ENSMUSG00000056310.15	novel	1867	8	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	112.003097624802	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGACTTAGGCTGGG	4954	False	NA	NA	False	TTTAAA	-7	NA	130285901	130306592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130305813
ES.27326.24	chr5	+	2760	17	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	26	-404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	100.072395669335	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCTTTGTCCTTACCT	4954	False	NA	22	True	AATAAA	-25	NA	130285901	130370000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295488_130295635_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.25	chr5	+	2437	15	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	26	-413	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	80.8066475341867	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGCTACTGGCTTTG	4954	False	NA	13	True	AATAAA	-16	NA	130285901	130369991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130369459
ES.27326.26	chr5	+	1688	10	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	26	-2823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	99.0858213873206	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTGAGGGTCCTGAT	4954	False	NA	NA	False	NA	NA	NA	130285901	130311404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130310967
ES.27326.28	chr5	+	2579	16	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	26	-414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2724135847746	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGAGCTACTGGCTTT	4954	False	NA	12	True	AATAAA	-15	NA	130285901	130369990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286010_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.29	chr5	+	1839	13	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	29	41476	29	14701	5prime_fragment	FALSE	canonical	3	235	junction_10	33.3727891485796	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGTACTTCATTTTT	4957	False	NA	NA	False	AGTAAA	-14	NA	130285904	130328928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744
ES.27326.3	chr5	+	3285	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	1	374	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTGTTACATTGCAT	3513	False	NA	NA	False	NA	NA	NA	130284460	130370778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.30	chr5	+	5520	17	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	29	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.708817679442	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGCTACTGGCTTTG	4957	False	NA	13	True	AATAAA	-16	NA	130285904	130369991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130300000_130302919_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.31	chr5	+	2362	14	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	30	-407	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	80.1704545025655	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACTGGCTTTGTCCTTA	4958	False	NA	19	True	AATAAA	-22	NA	130285905	130369997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130286035_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.33	chr5	+	1477	11	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	31	52599	31	3578	5prime_fragment	FALSE	canonical	3	235	junction_10	34.226305672684	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTGCTTGTTTCTTT	4959	False	NA	NA	False	ATTAAA	-13	NA	130285906	130317805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693
ES.27326.34	chr5	+	2078	9	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	31	58898	31	-2721	5prime_fragment	FALSE	canonical	3	266	junction_8	28.1724599564894	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATCCTTTTGTCTCAGC	4959	False	NA	NA	False	NA	NA	NA	130285906	130311506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621
ES.27326.35	chr5	+	2756	17	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	31	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.9143187623776	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTACTGGCTTTGTCCT	4959	False	NA	17	True	AATAAA	-20	NA	130285906	130369995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295482_130295635_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.36	chr5	+	4572	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	31	-1559	31	1559	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAAAGAGTTCAAAGTC	4959	False	NA	NA	False	NA	NA	NA	130285906	130371963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.37	chr5	+	1267	9	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	55	59685	55	-3508	5prime_fragment	FALSE	canonical	3	266	junction_8	28.1724599564894	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTTTGTCCATTTA	4983	False	NA	NA	False	NA	NA	NA	130285930	130310719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621
ES.27326.39	chr5	+	2477	15	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	1897	409	2	-409	3prime_fragment	FALSE	canonical	3	235	junction_9	32.6402781100597	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTACTGGCTTTGTCCT	6825	False	NA	17	True	AATAAA	-20	NA	130287772	130369995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.40	chr5	+	2213	11	ISM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	12257	4	10362	-4	3prime_fragment	FALSE	canonical	3	235	junction_5	25.9539977652769	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTGACATGTTCCCAT	NA	False	NA	NA	False	AATAAA	-13	NA	130298132	130370400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.41	chr5	+	2468	1	Intergenic	novelGene_22769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCGGAGAGAAAAGAATGAT	NA	False	NA	NA	False	NA	NA	NA	130350490	130352958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130350500_130353000
ES.27326.5	chr5	+	1733	13	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	1	14699	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	74.5569785838694	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTGTACTTCATTT	3513	False	NA	NA	False	AGTAAA	-12	NA	130284460	130328926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744
ES.27326.7	chr5	+	2298	15	NNC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	5	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.4404665383674	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGCTACTGGCTTTG	3517	False	NA	13	True	AATAAA	-16	NA	130284464	130369991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295930_130298011_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27326.9	chr5	+	2606	17	NNC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	8	-407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.146474852068	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACTGGCTTTGTCCTTA	3520	False	NA	19	True	AATAAA	-22	NA	130284467	130369997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_130284487_130285447_130285557_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ES.27327.1	chr5	-	155	1	Intergenic	novelGene_22766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130284757	130284602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130284600_130284800
ES.27328.1	chr5	-	362	1	Intergenic	novelGene_22767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGTAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	130285151	130284789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130284800_130285200
ES.27329.1	chr5	-	178	1	Intergenic	novelGene_22768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	130305529	130305351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130305400_130305500
ES.2733.1	chr10	-	1213	2	Intergenic	novelGene_2079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44943245	44940916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44941690_44942805
ES.2733.2	chr10	-	1227	1	Antisense	novelGene_ENSMUSG00000019849.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCACTGTTGGTTTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	44943734	44942507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_44942500_44943700
ES.27330.1	chr5	-	3022	1	Intergenic	novelGene_22770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCTTGTCATAGATAG	NA	False	NA	NA	False	NA	NA	NA	130369253	130366231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130366200_130369300
ES.27331.1	chr5	+	285	1	Intergenic	novelGene_22771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGGGATCAGCGTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	130863543	130863828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_130863500_130863800
ES.27332.1	chr5	-	3072	1	Intergenic	novelGene_22772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTGGGGAAGTCGGA	NA	False	NA	NA	False	NA	NA	NA	130958577	130955505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_130955500_130958600
ES.27333.1	chr5	+	178	1	Intergenic	novelGene_22773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	131107492	131107670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_131107500_131107700
ES.27334.1	chr5	+	2370	1	Intergenic	novelGene_22774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCCAAAAACTT	NA	False	NA	NA	False	AATAAA	-7	NA	131540145	131542515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_131540100_131542500
ES.27335.1	chr5	+	2829	1	Antisense	novelGene_ENSMUSG00000029673.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	131566054	131568883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_131566100_131568900
ES.27336.1	chr5	-	6265	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-78	2	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	9.03379584978658	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGATGTTTCTTTGTGC	NA	False	NA	-3	True	ATTAAA	-16	NA	131567604	131466168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.11	chr5	-	6145	14	NNC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.9258637472093	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	131567581	131466170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131503975_131505445_131505863_131562659_131562712_131566498
ES.27336.12	chr5	-	7210	13	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	10	junction_8	12.5996031683542	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	131566812	131466172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.13	chr5	-	6143	13	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	16.5193489244852	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	131567516	131466172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.15	chr5	-	6335	15	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-86	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	16.5278058842346	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	131567612	131466172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499251_131499297_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.16	chr5	-	6086	14	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-55	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	19.7451214857039	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCAGATGTTTCTTT	NA	False	NA	-7	True	ATTAAA	-12	NA	131567581	131466172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472593_131472644_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.17	chr5	-	5855	15	NNC	ENSMUSG00000029673.20	novel	3857	19	NA	NA	-172	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.8332697563874	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTCCAGATGTTTCTT	NA	False	NA	-8	True	ATTAAA	-11	NA	131567016	131466173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499113_131499297_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.18	chr5	-	6092	14	FSM	ENSMUSG00000029673.20	ENSMUST00000161374.8	4217	14	-27	-1848	-27	-117	multi-exon	FALSE	canonical	3	21	junction_11	11.7397821618248	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTCCAGATCCTACTC	NA	False	NA	NA	False	NA	NA	NA	131567553	131466287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.19	chr5	-	6094	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-22	-131	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	14.1989248697083	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAAAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	131567548	131466301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.2	chr5	-	5621	15	NNC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.028576791076	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCAGATGTTTCTTTGTG	NA	False	NA	-4	True	ATTAAA	-15	NA	131566829	131466169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131560307_131560440_131562659_131562712_131566498
ES.27336.20	chr5	-	6200	15	NIC	ENSMUSG00000029673.20	novel	5393	15	NA	NA	-83	-131	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	17.6149287334838	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAAAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	131567609	131466301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499251_131499297_131501075_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.25	chr5	-	5760	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-57	-10	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	9.03379584978658	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTTTGTTTTGTTT	NA	False	NA	-12	True	ATTAAA	-20	NA	131567583	131466652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.26	chr5	-	5235	14	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-194	-11	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	12.2285919687616	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTTTTTGTTTTGTT	NA	False	NA	-13	True	ATTAAA	-19	NA	131567038	131466653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.28	chr5	-	5792	15	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-23	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.4655010858244	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGTTTTTTGTTTTGT	NA	False	NA	-14	True	ATTAAA	-18	NA	131567549	131466654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131472593_131472644_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.29	chr5	-	6123	15	NNC	ENSMUSG00000029673.20	novel	5393	15	NA	NA	-80	-13	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	18.7910095741641	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCCTGTTTTTTGTTTTG	NA	False	NA	-15	True	ATTAAA	-17	NA	131567606	131466655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131498950_131499297_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.3	chr5	-	5739	15	NIC	ENSMUSG00000029673.20	novel	5393	15	NA	NA	-193	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	17.2951568070253	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCAGATGTTTCTTTGTG	NA	False	NA	-4	True	ATTAAA	-15	NA	131567037	131466169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499251_131499297_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.30	chr5	-	1803	2	ISM	ENSMUSG00000029673.20	ENSMUST00000161374.8	4217	14	95200	-374	12374	156	3prime_fragment	FALSE	canonical	3	58	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTATTTACAAGTC	4357	False	NA	NA	False	CATAAA	-10	NA	131472326	131467761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_131469532_131472293
ES.27336.31	chr5	-	6358	7	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	157	8293	intron_retention	FALSE	canonical	2	3	junction_2	20.9741904889478	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATACTCTGCTCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	131567369	131490148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131490192_131494869_131499297_131501075_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ES.27336.32	chr5	-	3398	1	Intergenic	novelGene_22775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCTGGTCAGCCTTA	NA	False	NA	NA	False	NA	NA	NA	131557160	131553762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_131553800_131557200
ES.27336.4	chr5	-	6259	14	NIC	ENSMUSG00000029673.20	novel	3572	17	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	12.2285919687616	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	131567579	131466170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501075_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27336.5	chr5	-	5349	13	NNC	ENSMUSG00000029673.20	novel	7410	19	NA	NA	27107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.9334891725112	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	2614	False	NA	-5	True	ATTAAA	-14	NA	131536129	131466170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504012_131505390_131505863_131535882
ES.27336.7	chr5	-	6067	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	18.4301014390386	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	131567581	131466170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_131469532_131472593_131472644_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
ES.27337.1	chr5	+	205	1	Intergenic	novelGene_22776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGCAGAGGTCCTAAAA	1647	False	NA	NA	False	NA	NA	NA	131588166	131588371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_131588200_131588400
ES.27338.1	chr5	-	2498	1	Intergenic	novelGene_22777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	131919748	131917250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_131917200_131919700
ES.27339.1	chr5	+	214	1	Intergenic	novelGene_22778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGTGTATCTCAGGAA	NA	False	NA	NA	False	NA	NA	NA	131974867	131975081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_131974900_131975100
ES.2734.1	chr10	-	166	1	Intergenic	novelGene_2080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	44959381	44959215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44959200_44959400
ES.27340.1	chr5	-	3339	1	FSM	ENSMUSG00000106356.2	ENSMUST00000197832.2	974	1	-605	-1760	-605	1760	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGATACAA	9430	False	NA	NA	False	NA	NA	NA	131988009	131984670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_131984700_131988000
ES.27341.1	chr5	+	2718	1	Genic_Genomic	ENSMUSG00000106395.2	novel	NA	NA	NA	NA	8405	1107	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCATCTTTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	131992235	131994953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_131992200_131995000
ES.27342.1	chr5	-	1677	1	Intergenic	novelGene_22779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	132089832	132088155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_132088200_132089800
ES.27343.1	chr5	+	1176	1	Intergenic	novelGene_22780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCATTTGCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	132284989	132286165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_132285000_132286200
ES.27344.1	chr5	+	753	1	Intergenic	novelGene_22781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATGGCTAGCCTGCCCA	NA	False	NA	NA	False	NA	NA	NA	132366357	132367110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_132366400_132367100
ES.27345.1	chr5	+	7709	1	Antisense	novelGene_ENSMUSG00000106450.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGCTTGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	132468008	132475717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_132468000_132475700
ES.27346.1	chr5	+	168	1	Antisense	novelGene_ENSMUSG00000105624.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	132521301	132521469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_132521300_132521500
ES.27347.1	chr5	+	564	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	-42	-108	-42	108	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCCAGCAGGCAGGAA	NA	False	NA	NA	False	NA	NA	NA	133503919	133504483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_133503900_133504500
ES.27348.1	chr5	-	856	2	Intergenic	novelGene_22782	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	133979255	133978336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_133978386_133978448
ES.27349.1	chr5	+	4846	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	-16	2537	-16	-2524	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAAGAAAACGT	NA	False	NA	NA	False	NA	NA	NA	134128533	134170645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ES.27349.2	chr5	+	7370	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	-16	13	-16	0	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGCCTGATAGCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	134128533	134173169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ES.27349.3	chr5	+	3808	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	4	3555	4	3242	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTGTTATTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	134128553	134169627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ES.27349.4	chr5	+	3274	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	6	4087	6	2710	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTCTGTAAATAGCAT	NA	False	NA	NA	False	TATAAA	-23	NA	134128555	134169095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ES.27349.5	chr5	+	2930	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	6	4431	6	2366	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	134128555	134168751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ES.27349.6	chr5	+	8343	1	Intergenic	novelGene_22783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACTCAGTATATAGCC	NA	False	NA	NA	False	NA	NA	NA	134136584	134144927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134136600_134144900
ES.27349.7	chr5	+	1334	2	NNC	ENSMUSG00000015944.10	novel	7367	9	NA	NA	7640	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCTGATTCTATGT	NA	False	NA	NA	False	ATTAAA	-27	NA	134171436	134173181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134171547_134171957
ES.27349.8	chr5	+	2813	1	Genic_Genomic	ENSMUSG00000015944.10	novel	NA	NA	NA	NA	7664	1091	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134171460	134174273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_134171500_134174300
ES.2735.1	chr10	-	163	1	Intergenic	novelGene_2081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGCAAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	44997463	44997300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_44997300_44997500
ES.27350.1	chr5	+	189	1	Intergenic	novelGene_22784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACCTCGTC	4615	False	NA	NA	False	NA	NA	NA	134188637	134188826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134188600_134188800
ES.27351.1	chr5	+	178	1	Intergenic	novelGene_22785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGCCA	6068	False	NA	NA	False	NA	NA	NA	134190090	134190268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134190100_134190300
ES.27352.1	chr5	+	636	1	FSM	ENSMUSG00000104195.2	ENSMUST00000192229.2	599	1	-12	-25	0	25	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTACTGCCCCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	134205184	134205820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134205200_134205800
ES.27353.1	chr5	-	2374	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	-5	-48	-5	48	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAAGGCAGTCCCACTC	NA	False	NA	52	True	CATAAA	-20	NA	134205618	134176844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.10	chr5	-	6679	10	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	45	-16	intron_retention	FALSE	canonical	3	11	junction_9	112.409963971171	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTCTTGTAAAAGTTT	NA	False	NA	-12	True	AATAAA	-26	NA	134205568	134176908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198182_134200685
ES.27353.11	chr5	-	2171	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	2	-18	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	114.237569224061	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGGTCTTGTAAAAGT	NA	False	NA	-14	True	AATAAA	-24	NA	134205611	134176910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134205238
ES.27353.12	chr5	-	2158	10	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	65	-18	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	145.712637885347	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGGTCTTGTAAAAGT	NA	False	NA	-14	True	AATAAA	-24	NA	134205548	134176910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200677_134200816_134205238
ES.27353.13	chr5	-	2146	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	69	-18	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	112.786042390114	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGGTCTTGTAAAAGT	NA	False	NA	-14	True	AATAAA	-24	NA	134205544	134176910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134177846_134182962_134183049_134184578_134184753_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.14	chr5	-	1968	7	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	2	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	132.402689633641	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGGTCTTGTAAAAGT	NA	False	NA	-14	True	AATAAA	-24	NA	134205611	134176910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134200685_134200816_134205238
ES.27353.15	chr5	-	2385	12	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	65	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	140.171618541801	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGGTCTTGTAAAAGT	NA	False	NA	-14	True	AATAAA	-24	NA	134205548	134176910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134195733_134195881_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.16	chr5	-	4578	12	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	259	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	139.951939802725	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAGGTCTTGTAAAAG	NA	False	NA	-15	True	AATAAA	-23	NA	134205354	134176911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134201516_134202299_134202626_134203729
ES.27353.18	chr5	-	2066	11	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	-1767	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	110.300317315953	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGAGGTCTTGTAA	NA	False	NA	-18	True	AATAAA	-20	NA	134207380	134176914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134207238
ES.27353.19	chr5	-	2101	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	-3	-49	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	114.615083143322	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAAGCCTATTTTCTG	NA	False	NA	-45	True	NA	NA	NA	134205616	134176941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134177846_134182962_134183049_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.2	chr5	-	2363	11	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	3522	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	110.300317315953	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGACTTGATCATT	NA	False	NA	0	True	AATAAA	-38	NA	134202091	134176896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134201670
ES.27353.20	chr5	-	1255	5	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	12	18097	12	-1305	5prime_fragment	FALSE	canonical	3	352	junction_3	16.4772570532841	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAGAAACTGCCAT	NA	False	NA	NA	False	NA	NA	NA	134205601	134194989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.21	chr5	-	2759	1	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	464	-1307	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGAAACTGCC	NA	False	NA	NA	False	NA	NA	NA	134197750	134194991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134195000_134197800
ES.27353.22	chr5	-	642	3	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	14	-5219	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	178.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	134205599	134198903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134199055_134200685_134200816_134205238
ES.27353.23	chr5	-	3087	1	Genic_Genomic	ENSMUSG00000061979.9	novel	NA	NA	NA	NA	-3	-8845	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTGAAGTGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	134205616	134202529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_134202500_134205600
ES.27353.3	chr5	-	2126	11	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	13	-4	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_10	110.009135984245	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGACTTGATCATT	NA	False	NA	0	True	AATAAA	-38	NA	134205600	134176896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205416
ES.27353.4	chr5	-	2584	12	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	139.902858860551	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGACTTGATCATT	NA	False	NA	0	True	AATAAA	-38	NA	134205547	134176896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195073_134195407_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27353.5	chr5	-	2363	12	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	68	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	140.601482422854	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTTGACTTGATCAT	NA	False	NA	-1	True	AATAAA	-37	NA	134205545	134176897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134199292_134199408_134200685_134200816_134205238
ES.27353.6	chr5	-	2293	11	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	105.866141896264	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGTTTGACTTGATCA	NA	False	NA	-2	True	AATAAA	-36	NA	134205583	134176898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200677_134200816_134205238
ES.27353.7	chr5	-	3470	8	NNC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	104	-14	intron_retention	FALSE	canonical	3	5	junction_2	161.498088697858	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCTTGTAAAAGTTTGA	NA	False	NA	-10	True	AATAAA	-28	NA	134205509	134176906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134177846_134182962_134183049_134192462_134194263_134195503_134195556_134197050_134197118_134198056_134198182_134200685_134200816_134205238
ES.27353.9	chr5	-	3824	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	14	-16	intron_retention	FALSE	canonical	3	313	junction_2	27.7493187548456	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTCTTGTAAAAGTTT	NA	False	NA	-12	True	AATAAA	-26	NA	134205599	134176908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ES.27354.1	chr5	+	3204	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	-18	296	-10	-296	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATCTGGCCATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	134212847	134246692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ES.27354.2	chr5	+	3499	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	-18	1	-10	-1	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTTTGTGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	134212847	134246987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ES.27354.3	chr5	+	3251	14	NIC	ENSMUSG00000015942.10	novel	3482	16	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.02259733913669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTGTGTGTGTTTGT	NA	False	NA	3	True	AATAAA	-10	NA	134212852	134246981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134213098_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ES.27354.4	chr5	+	4950	15	ISM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	-4	2	-4	-2	intron_retention	FALSE	canonical	1	3	junction_8	3.15015386731428	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTTTGTGTGTG	NA	False	NA	8	True	AATAAA	-15	NA	134212861	134246986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482
ES.27354.5	chr5	+	3628	16	NIC	ENSMUSG00000015942.10	novel	3482	16	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.49221356098901	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTGTGTGTGTTTGT	NA	False	NA	3	True	AATAAA	-10	NA	134212862	134246981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134213098_134220018_134220267_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ES.27354.6	chr5	+	3442	15	NNC	ENSMUSG00000015942.10	novel	3482	16	NA	NA	178	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.35889894354067	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTGTGTGTGTTTGT	NA	False	NA	3	True	AATAAA	-10	NA	134213043	134246981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244775
ES.27355.1	chr5	-	1247	1	Antisense	novelGene_ENSMUSG00000015942.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAATATTTAA	8783	False	NA	NA	False	NA	NA	NA	134213326	134212079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_134212100_134213300
ES.27356.1	chr5	-	2255	6	NIC	ENSMUSG00000015950.14	novel	2721	11	NA	NA	1065	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCTTTGGATCATGGT	8831	False	NA	NA	False	NA	NA	NA	134255599	134249113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134250723_134250883_134251030_134251535_134251644_134254089_134254198_134254528_134254652_134255438
ES.27356.2	chr5	-	251	1	Intergenic	novelGene_22786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTGACAACTCCC	9400	False	NA	NA	False	NA	NA	NA	134255030	134254779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134254800_134255000
ES.27357.1	chr5	+	106	1	Intergenic	novelGene_22787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	134259240	134259346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134259200_134259300
ES.27358.1	chr5	+	3729	24	Antisense	novelGene_ENSMUSG00000107076.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGCAAAATTGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134273697	134342096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134273734_134273971_134274039_134275365_134275465_134275673_134275752_134276074_134276131_134278694_134278880_134280719_134280792_134283866_134283928_134284680_134284865_134289421_134289495_134290698_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303449_134308289_134308366_134311633_134311684_134312045_134312100_134315545_134315578_134315712_134315900_134318141_134318278_134322600_134322733_134324363_134324467_134340525
ES.27358.10	chr5	+	1575	2	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGGGAGGCCTACA	NA	False	NA	NA	False	AAAACA	-35	NA	134292588	134294962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134293659_134294457
ES.27358.11	chr5	+	8414	1	Antisense	novelGene_ENSMUSG00000060261.17_AS_novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACAGAGCCACAGGGT	NA	False	NA	NA	False	NA	NA	NA	134297467	134305881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134297500_134305900
ES.27358.12	chr5	+	607	1	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGCCACCCCT	NA	False	NA	NA	False	NA	NA	NA	134297467	134298074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134297500_134298100
ES.27358.13	chr5	+	901	1	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGGGAGTTCACCCAT	NA	False	NA	NA	False	NA	NA	NA	134297467	134298368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134297500_134298400
ES.27358.14	chr5	+	182	1	Intergenic	novelGene_22789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	134310294	134310476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134310300_134310500
ES.27358.15	chr5	+	184	1	Intergenic	novelGene_22791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	134335604	134335788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134335600_134335800
ES.27358.2	chr5	+	3790	25	Antisense	novelGene_ENSMUSG00000107076.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGCAAAATTGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134273701	134342096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134273734_134273971_134274039_134275364_134275465_134275673_134275752_134276074_134276131_134278694_134278880_134280719_134280792_134283866_134283928_134284680_134284865_134289421_134289495_134290698_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303449_134308289_134308368_134311639_134311685_134312047_134312100_134315545_134315578_134315713_134315900_134318141_134318278_134322600_134322740_134324363_134324467_134340525
ES.27358.3	chr5	+	2004	8	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-6	NA	134277849	134294933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134278880_134280719_134280792_134283866_134283928_134284680_134284865_134289421_134289495_134290698_134290756_134292438_134292623_134294590
ES.27358.4	chr5	+	1464	1	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCATGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	134277849	134279313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134277800_134279300
ES.27358.5	chr5	+	5922	9	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCGCCAGATGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	134277849	134299593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134278880_134280719_134280792_134283866_134283928_134284680_134284865_134289421_134289495_134290698_134290756_134292438_134292623_134294590_134294655_134295396
ES.27358.6	chr5	+	2584	13	Antisense	novelGene_ENSMUSG00000107076.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134292588	134342069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134292623_134294590_134294657_134295396_134295511_134303392_134303449_134308289_134308368_134311639_134311685_134312047_134312100_134315545_134315578_134315713_134315900_134318141_134318278_134322600_134322740_134324363_134324469_134340528
ES.27358.7	chr5	+	2767	5	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACAGAGCCACAGGGT	NA	False	NA	NA	False	NA	NA	NA	134292588	134305881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303391
ES.27358.8	chr5	+	1386	14	Antisense	novelGene_ENSMUSG00000107076.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134292588	134342072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303449_134308289_134308368_134311639_134311685_134312047_134312100_134315545_134315578_134315713_134315900_134318141_134318278_134322600_134322740_134324363_134324466_134341789
ES.27359.1	chr5	+	199	1	Intergenic	novelGene_22795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAGAATAACCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	134353624	134353823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134353600_134353800
ES.2736.1	chr10	-	177	1	Intergenic	novelGene_2083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAAGTGCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	45020188	45020011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45020000_45020200
ES.27360.1	chr5	+	174	1	Intergenic	novelGene_22796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAGTTATTATATGTA	NA	False	NA	NA	False	NA	NA	NA	134356251	134356425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134356300_134356400
ES.27361.1	chr5	+	211	1	Intergenic	novelGene_22797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	134356577	134356788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134356600_134356800
ES.27361.2	chr5	+	201	2	Intergenic	novelGene_22798	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACAAACCTTCTCTGTG	NA	False	NA	NA	False	AAGAAA	-6	NA	134356581	134369867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134356741_134369825
ES.27362.1	chr5	+	216	1	Intergenic	novelGene_22800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTACTTCTGTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	134371892	134372108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134371900_134372100
ES.27363.1	chr5	-	4368	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-44	4	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	96.4752184420305	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCCTGCTGTCTTCG	577	False	NA	1	True	AATAAA	-35	NA	134343658	134266683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.11	chr5	-	4182	31	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_23	97.5528859417063	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	651	False	NA	-3	True	AATAAA	-31	NA	134343584	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.12	chr5	-	4966	23	ISM	ENSMUSG00000060261.17	ENSMUST00000172904.8	3274	25	11375	-9	-2698	0	3prime_fragment	FALSE	canonical	3	264	junction_8	50.0097511152732	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	9265	False	NA	-3	True	AATAAA	-31	NA	134297344	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396
ES.27363.13	chr5	-	4315	34	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	97.599084356451	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	680	False	NA	-3	True	AATAAA	-31	NA	134343555	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301417_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.14	chr5	-	4273	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	123.524401158884	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	817	False	NA	-3	True	AATAAA	-31	NA	134343418	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322454_134322514_134322600_134322740_134324363_134324468_134343236
ES.27363.15	chr5	-	3446	27	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	126.480773616683	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	6217	False	NA	-3	True	AATAAA	-31	NA	134308740	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292624_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134308625
ES.27363.16	chr5	-	4416	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	120.544299743671	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	662	False	NA	-3	True	AATAAA	-31	NA	134343573	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322454_134322514_134322600_134322740_134324363_134324468_134343236
ES.27363.17	chr5	-	4276	32	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	92.9314137344788	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	635	False	NA	-3	True	AATAAA	-31	NA	134343600	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.18	chr5	-	4168	31	FSM	ENSMUSG00000060261.17	ENSMUST00000172715.8	4114	31	-46	-8	-1	0	multi-exon	FALSE	canonical	3	10	junction_23	92.6270238945177	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	653	False	NA	-3	True	AATAAA	-31	NA	134343582	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.19	chr5	-	4254	32	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	87.7984282082411	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	645	False	NA	-3	True	AATAAA	-31	NA	134343590	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.2	chr5	-	4333	33	FSM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	-22	-9	4	4	multi-exon	TRUE	canonical	3	192	junction_8	74.2225788486058	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCCTGCTGTCTTCG	639	False	NA	1	True	AATAAA	-35	NA	134343596	134266683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.20	chr5	-	3741	30	NNC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	6137	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	99.3362753503252	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	NA	False	NA	-3	True	AATAAA	-31	NA	134318275	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295526_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140
ES.27363.22	chr5	-	4000	33	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	133	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.828598224344	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	838	False	NA	-3	True	AATAAA	-31	NA	134343397	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267629_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.24	chr5	-	4354	34	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	103.721956502901	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	661	False	NA	-3	True	AATAAA	-31	NA	134343574	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318256_134322596_134322740_134324363_134324468_134343236
ES.27363.27	chr5	-	4478	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	124.242928826239	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	663	False	NA	-3	True	AATAAA	-31	NA	134343572	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134316806_134316917_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.28	chr5	-	4265	32	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	100.848295831473	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	625	False	NA	-3	True	AATAAA	-31	NA	134343610	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.29	chr5	-	4061	33	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_32	101.285907020362	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	1090	False	NA	-3	True	AATAAA	-31	NA	134343145	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343041
ES.27363.37	chr5	-	4414	33	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_32	134.482191984432	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	682	False	NA	-6	True	AATAAA	-28	NA	134343553	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134335385_134335586_134343236
ES.27363.4	chr5	-	4419	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	119.381740647387	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTCCTGCTGTCTTC	663	False	NA	0	True	AATAAA	-34	NA	134343572	134266684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305286_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.40	chr5	-	5582	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-4	0	intron_retention	FALSE	canonical	3	228	junction_22	70.7938178687765	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	650	False	NA	-6	True	AATAAA	-28	NA	134343585	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.41	chr5	-	4609	35	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	121.48486242865	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	603	False	NA	-6	True	AATAAA	-28	NA	134343632	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134335385_134335582_134343236
ES.27363.42	chr5	-	3395	16	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	6553	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	118.482553802472	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	NA	False	NA	-6	True	AATAAA	-28	NA	134281786	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280710
ES.27363.43	chr5	-	5019	32	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_31	136.624377779143	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	665	False	NA	-6	True	AATAAA	-28	NA	134343570	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134335385_134335586_134343236
ES.27363.44	chr5	-	4276	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	100.321592267069	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	665	False	NA	-6	True	AATAAA	-28	NA	134343570	134266690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.47	chr5	-	4364	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-35629	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	121.840556085675	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTCATTCTTTTCCTG	6974	False	NA	-8	True	AATAAA	-26	NA	134379243	134266692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283921_134284673_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236_134343565_134379222
ES.27363.48	chr5	-	4286	33	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	100.695312196931	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTCATTCTTTTCCTG	662	False	NA	-8	True	AATAAA	-26	NA	134343573	134266692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.5	chr5	-	4309	33	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	196	junction_23	67.772417589588	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTTTTCCTGCTGTCT	648	False	NA	-2	True	AATAAA	-32	NA	134343587	134266686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.50	chr5	-	4066	31	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	126.297395943947	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTCATTCTTTTCCTG	687	False	NA	-8	True	AATAAA	-26	NA	134343548	134266692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134322600_134322740_134324363_134324468_134343236
ES.27363.52	chr5	-	4078	33	NNC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	127.753042405064	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	810	False	NA	-11	True	AATAAA	-23	NA	134343425	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292570_134294590_134294657_134295415_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.53	chr5	-	4136	33	NNC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	103.777514235684	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	817	False	NA	-11	True	AATAAA	-23	NA	134343418	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322733_134324363_134324468_134343236
ES.27363.54	chr5	-	3351	26	NIC	ENSMUSG00000060261.17	novel	4021	33	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_25	103.412215912821	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	6240	False	NA	-11	True	AATAAA	-23	NA	134308717	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134308625
ES.27363.55	chr5	-	3984	31	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	139	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	119.23748944392	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	844	False	NA	-11	True	AATAAA	-23	NA	134343391	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.56	chr5	-	4583	36	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_35	148.977697276184	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	685	False	NA	-11	True	AATAAA	-23	NA	134343550	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305283_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134335385_134335586_134343236
ES.27363.58	chr5	-	4356	34	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	121.526637407742	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	651	False	NA	-11	True	AATAAA	-23	NA	134343584	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322454_134322514_134322600_134322740_134324363_134324468_134343236
ES.27363.59	chr5	-	3599	30	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	6250	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_24	99.7194876580659	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	NA	False	NA	-11	True	AATAAA	-23	NA	134318162	134266695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140
ES.27363.6	chr5	-	4430	35	NNC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	122.46290307582	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTTTTCCTGCTGTCT	662	False	NA	-2	True	AATAAA	-32	NA	134343573	134266686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305286_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.60	chr5	-	4147	34	NIC	ENSMUSG00000060261.17	novel	4084	34	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_33	101.25304017701	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	1058	False	NA	-12	True	AATAAA	-22	NA	134343177	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343041
ES.27363.61	chr5	-	4459	34	NNC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	125.254429767208	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	677	False	NA	-12	True	AATAAA	-22	NA	134343558	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134340526_134340704_134343236
ES.27363.63	chr5	-	4395	35	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	118	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	124.485477398149	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	823	False	NA	-12	True	AATAAA	-22	NA	134343412	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134335385_134335582_134343236
ES.27363.64	chr5	-	4336	33	NNC	ENSMUSG00000060261.17	novel	4021	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	137.852715220811	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	662	False	NA	-12	True	AATAAA	-22	NA	134343573	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134340526_134340656_134343236
ES.27363.66	chr5	-	4262	33	NNC	ENSMUSG00000060261.17	novel	4021	33	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	99.6357771382223	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	678	False	NA	-12	True	AATAAA	-22	NA	134343557	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322733_134324363_134324468_134343236
ES.27363.67	chr5	-	4336	34	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.880834293534	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	673	False	NA	-12	True	AATAAA	-22	NA	134343562	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271759_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134305225_134305286_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.68	chr5	-	4273	34	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	122.122595676049	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	851	False	NA	-12	True	AATAAA	-22	NA	134343384	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134340526_134340704_134343236
ES.27363.69	chr5	-	4875	34	NNC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	122.809041222789	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	652	False	NA	-12	True	AATAAA	-22	NA	134343583	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134313260_134313841_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.7	chr5	-	4407	34	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_8	75.7046966966276	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	624	False	NA	-3	True	AATAAA	-31	NA	134343611	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.70	chr5	-	4081	32	NNC	ENSMUSG00000060261.17	novel	4021	33	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	99.8284897578126	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	842	False	NA	-12	True	AATAAA	-22	NA	134343393	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134312027_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.71	chr5	-	4310	33	NNC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	102.394438783315	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	650	False	NA	-12	True	AATAAA	-22	NA	134343585	134266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134284669_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.74	chr5	-	6024	32	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-144	-1	intron_retention	FALSE	canonical	3	35	junction_24	94.170777185677	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCAAACTCATTCTTT	859	False	NA	-13	True	AATAAA	-21	NA	134343376	134266697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.78	chr5	-	3471	27	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-46	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_26	106.756344822045	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGCAAACTCATTCTT	6192	False	NA	-14	True	AATAAA	-20	NA	134308765	134266698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134308625
ES.27363.79	chr5	-	4208	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_30	99.7339429432127	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATGCAAACTCATTCTT	665	False	NA	-14	True	AATAAA	-20	NA	134343570	134266698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134322600_134322740_134324363_134324468_134343236
ES.27363.8	chr5	-	4237	32	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	96.4058689669873	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	641	False	NA	-3	True	AATAAA	-31	NA	134343594	134266687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.82	chr5	-	3460	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	15	906	-4	100	multi-exon	FALSE	canonical	3	228	junction_23	69.7198249746108	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGCTACACAGCGTGA	650	False	NA	32	True	NA	NA	NA	134343585	134267596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.83	chr5	-	3388	33	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-5	90	combination_of_known_junctions	FALSE	canonical	3	196	junction_23	67.772417589588	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCTGTGAATTGAGCTA	649	False	NA	22	True	NA	NA	NA	134343586	134267606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.84	chr5	-	3373	33	FSM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	-8	937	-1	67	multi-exon	FALSE	canonical	3	192	junction_8	74.2225788486058	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGAAATGTCTACTTTCT	653	False	NA	-1	True	NA	NA	NA	134343582	134267629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.85	chr5	-	3285	32	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	-4	66	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	96.4058689669873	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGAAATGTCTACTTTC	650	False	NA	-2	True	NA	NA	NA	134343585	134267630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.86	chr5	-	3422	34	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	1	62	combination_of_known_junctions	FALSE	canonical	3	192	junction_8	75.7046966966276	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATAGAAATGTCTAC	662	False	NA	-6	True	AATATA	-44	NA	134343573	134267634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.87	chr5	-	3293	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	-2	46	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	100.695312196931	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTCTTTTCTACTTTT	697	False	NA	-22	True	AATATA	-28	NA	134343538	134267650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.88	chr5	-	3372	33	NNC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	1	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.558705558999	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCTTCTATACAAACC	662	False	NA	-37	True	AATATA	-13	NA	134343573	134267665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134271435_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.89	chr5	-	3202	34	NNC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	147	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	95.7056149778685	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATACCTTCTATACAAA	852	False	NA	-39	True	AATATA	-11	NA	134343383	134267667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295526_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.90	chr5	-	1368	13	ISM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	11	25894	11	-24	5prime_fragment	FALSE	canonical	3	196	junction_3	85.8593811609036	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACCCTCTTTTCCAGTCC	672	False	NA	NA	False	NA	NA	NA	134343563	134292586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.91	chr5	-	259	1	Intergenic	novelGene_22788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCAGAGTCTCACTTCG	NA	False	NA	NA	False	NA	NA	NA	134294474	134294215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134294200_134294500
ES.27363.92	chr5	-	5234	1	FSM	ENSMUSG00000107000.2	ENSMUST00000201715.2	3672	1	-3163	1601	-3163	-1601	mono-exon	FALSE	NA	NA	NA	NA	NA	601	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTCATGTCTGATTG	9794	False	NA	NA	False	ATTAAA	-15	NA	134302753	134297519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134297500_134302800
ES.27363.93	chr5	-	2018	1	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	-944	-7855	mono-exon	FALSE	NA	NA	NA	NA	NA	600	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCGCTGCCCCAGCCCC	4174	False	NA	NA	False	NA	NA	NA	134302435	134300417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134300400_134302400
ES.27363.94	chr5	-	1846	11	NNC	ENSMUSG00000060261.17	novel	950	6	NA	NA	-1	-9808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.884149592897	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTTCGTATGTGACTG	653	False	NA	NA	False	CATAAA	-15	NA	134343582	134302370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134303046_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ES.27363.95	chr5	-	179	1	Intergenic	novelGene_22790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	600	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	134328807	134328628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134328600_134328800
ES.27363.96	chr5	-	177	1	Intergenic	novelGene_22792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACCAAAACAA	6288	False	NA	NA	False	NA	NA	NA	134337947	134337770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134337800_134337900
ES.27363.97	chr5	-	272	1	Intergenic	novelGene_22793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGCAATGGTGGCGCA	NA	False	NA	NA	False	AATAAA	-6	NA	134350075	134349803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134349800_134350100
ES.27363.98	chr5	-	157	1	Intergenic	novelGene_22794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	134350074	134349917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134349900_134350100
ES.27363.99	chr5	-	5799	1	Intergenic	novelGene_22799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTCTTGGTCTCATT	5305	False	NA	NA	False	NA	NA	NA	134371688	134365889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134365900_134371700
ES.27364.1	chr5	-	178	1	Intergenic	novelGene_22801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCTCA	1830	False	NA	NA	False	NA	NA	NA	134384387	134384209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134384200_134384400
ES.27364.2	chr5	-	161	2	Intergenic	novelGene_22802	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	51	False	NA	NA	False	NA	NA	NA	134386166	134384228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134384368_134386144
ES.27365.1	chr5	+	201	1	Intergenic	novelGene_22803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGTGCCACCACCTCC	NA	False	NA	NA	False	NA	NA	NA	134407080	134407281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134407100_134407300
ES.27366.1	chr5	-	3547	31	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	69.356534579583	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485087	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134453156_134453266_134484965
ES.27366.10	chr5	-	3682	30	FSM	ENSMUSG00000023079.15	ENSMUST00000111244.5	3461	30	-221	0	99	0	multi-exon	FALSE	canonical	3	55	junction_29	53.0244374146404	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485331	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.100	chr5	-	3618	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	68.8529511995593	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485110	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.103	chr5	-	3313	29	NNC	ENSMUSG00000023079.15	novel	3299	29	NA	NA	-12657	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	70.0797195473607	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	-24	True	NA	NA	False	TTTAAA	-6	NA	134456767	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134456690
ES.27366.104	chr5	-	3906	30	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	70.5412571869629	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134484816	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413941_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484205
ES.27366.105	chr5	-	3448	30	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.4783897368518	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485545	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390550_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.106	chr5	-	3390	30	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	66.1593579328937	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485110	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134484965
ES.27366.107	chr5	-	3527	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	60.9244576571374	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485597	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419810_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.11	chr5	-	3544	30	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-14388	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	59.2213446111327	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134458498	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134458270
ES.27366.110	chr5	-	3353	29	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_25	74.8109181161931	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485110	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.111	chr5	-	6854	19	NNC	ENSMUSG00000023079.15	novel	3487	29	NA	NA	638	0	intron_retention	FALSE	canonical	0	0	junction_15	73.0567173545136	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134423916	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134413939_134414643_134414692_134417287_134417391_134417984_134418066_134418527_134418566_134419675_134419785_134421248
ES.27366.113	chr5	-	3500	30	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	74.5390751335151	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485573	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.12	chr5	-	3433	30	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	61.7888506849376	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485564	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134405863_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.121	chr5	-	3536	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.5022301800453	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485551	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387967_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.122	chr5	-	1924	20	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-2372	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	71.1827269035001	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134419708	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417391_134417984_134418066_134418527_134418566_134419675
ES.27366.124	chr5	-	3268	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	81.144366183151	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGTAAAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	134485556	134386540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134416979_134417102_134417280_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134443988_134444131_134445906_134446036_134485362
ES.27366.126	chr5	-	6782	2	Intergenic	novelGene_22804	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTGCATTTGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	134468198	134461227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134463982_134464170
ES.27366.13	chr5	-	4654	30	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_29	60.1189071460287	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485131	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.14	chr5	-	4165	27	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-17	0	intron_retention	FALSE	canonical	2	2	junction_24	62.2503059568062	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485460	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134443988_134444131_134445906_134446036_134485362
ES.27366.15	chr5	-	3535	30	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	59.7683200437834	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485609	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.16	chr5	-	3567	30	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_16	59.6520230382548	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485606	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417280_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.18	chr5	-	4327	26	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-21	0	intron_retention	FALSE	canonical	3	127	junction_4	35.1946359549293	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485591	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.19	chr5	-	5522	28	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	48	0	intron_retention	FALSE	canonical	3	127	junction_7	46.8255965081086	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485382	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.2	chr5	-	3753	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	64.2361009609602	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485619	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.20	chr5	-	4731	29	FSM	ENSMUSG00000023079.15	ENSMUST00000100650.10	3487	29	-246	-998	-116	0	multi-exon	FALSE	canonical	3	127	junction_7	45.9988353889841	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485686	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.21	chr5	-	4580	29	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-7	0	intron_retention	FALSE	canonical	3	55	junction_28	53.2900587083825	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485138	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.22	chr5	-	4675	30	FSM	ENSMUSG00000023079.15	ENSMUST00000100652.10	3693	30	-3	-979	-3	0	multi-exon	FALSE	canonical	3	65	junction_8	54.3409328203516	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485549	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.24	chr5	-	3430	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-7057	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	65.0473673564119	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	5576	False	NA	NA	False	AGTAAA	-21	NA	134451167	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134451134
ES.27366.25	chr5	-	3464	30	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.4633898467374	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485563	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386748_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.26	chr5	-	3386	29	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	69.2542178042137	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485464	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.27	chr5	-	3579	30	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	66.7178024257633	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485545	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419808_134424468_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.28	chr5	-	3611	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	69.5060194133852	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485560	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392855_134405741_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.29	chr5	-	3375	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.3882143190044	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485398	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134389943_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.3	chr5	-	3753	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	-176	-5	-148	0	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485718	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.30	chr5	-	3704	7	ISM	ENSMUSG00000023079.15	ENSMUST00000202321.4	1439	14	17732	-2582	-4063	0	3prime_fragment	FALSE	canonical	3	100	junction_6	80.0388794413204	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134396193	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689
ES.27366.31	chr5	-	3612	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	59.5236274282929	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485598	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.33	chr5	-	3372	29	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	64.8963066148213	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485078	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.34	chr5	-	3532	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.4198461142815	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485589	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392852_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.36	chr5	-	3535	31	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	64.6651288476942	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485124	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.37	chr5	-	5511	30	NNC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_11	66.1807778940645	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485566	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134409694_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.39	chr5	-	3654	31	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	69.968413508446	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485578	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134416979_134417102_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.40	chr5	-	3575	30	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	65.2524777321012	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485597	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.42	chr5	-	3345	28	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	75.4351982552076	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485108	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.43	chr5	-	3255	29	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_26	67.5869432505953	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485560	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134443988_134444131_134445906_134446036_134485362
ES.27366.44	chr5	-	3482	30	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	69.9781518477627	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485107	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.45	chr5	-	3428	29	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	70.9186351118128	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485559	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.46	chr5	-	4648	29	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	3	0	intron_retention	FALSE	canonical	3	16	junction_11	64.2894840164551	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485107	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.47	chr5	-	3536	30	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	63.8779677833694	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485086	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.48	chr5	-	4693	29	NNC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_20	67.155194535205	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485566	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419812_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.49	chr5	-	3511	30	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	60.2418826341408	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485578	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412757_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.50	chr5	-	3739	30	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	58.3892999172587	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485686	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.51	chr5	-	2733	26	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	94	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_25	62.883562240064	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134444016	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134443988
ES.27366.52	chr5	-	3527	29	FSM	ENSMUSG00000023079.15	ENSMUST00000111245.9	3299	29	-187	-41	-60	0	multi-exon	FALSE	canonical	3	16	junction_11	59.2579431513667	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485630	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.53	chr5	-	4690	29	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_11	58.7312605806121	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485546	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.54	chr5	-	3600	31	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	69.2591670627233	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485537	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134453156_134453266_134485362
ES.27366.55	chr5	-	3565	30	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	13773	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	59.2213446111327	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134471032	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134470783
ES.27366.56	chr5	-	2553	26	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	70.8106884587348	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485108	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432651_134485005
ES.27366.57	chr5	-	4191	28	NNC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	4275	0	intron_retention	FALSE	canonical	0	0	junction_16	77.6962712259364	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134439835	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134416999_134417102_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807
ES.27366.60	chr5	-	4759	30	NNC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_14	74.1886754965889	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485555	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412757_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.61	chr5	-	3484	30	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	70.4382071222157	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485566	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443996_134444131_134445906_134446036_134485362
ES.27366.64	chr5	-	4568	29	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	-1927	0	intron_retention	FALSE	canonical	2	11	junction_8	69.5631686941841	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134446037	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906
ES.27366.66	chr5	-	4534	28	FSM	ENSMUSG00000023079.15	ENSMUST00000202554.4	3514	28	-103	-917	0	0	multi-exon	FALSE	canonical	3	16	junction_10	59.6628386936764	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485546	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.67	chr5	-	4694	30	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	-19	0	intron_retention	FALSE	canonical	2	11	junction_8	59.8374333543807	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485589	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.68	chr5	-	3433	30	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	65.0561268696639	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485110	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.69	chr5	-	3717	32	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	73.3733485881522	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485573	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134453156_134453266_134485362
ES.27366.7	chr5	-	3779	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	-255	0	-255	0	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485825	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.70	chr5	-	3658	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	68.6885482934868	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485545	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.71	chr5	-	3452	29	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	84.4162125351257	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485108	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417280_134417378_134417984_134418066_134418527_134418566_134419675_134419802_134424470_134424655_134430964_134431049_134432585_134432671_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.72	chr5	-	2259	16	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	87.2917458233531	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485138	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.73	chr5	-	5793	28	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-60	0	intron_retention	FALSE	canonical	0	0	junction_5	57.1560566765659	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485630	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392224_134392751_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.76	chr5	-	3628	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	65.303190325333	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485621	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.77	chr5	-	4780	30	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	16	junction_12	64.5715965579695	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCACTTTTTTTTCCCC	NA	False	NA	NA	False	AGTAAA	-20	NA	134485556	134386510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.78	chr5	-	3359	29	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	16310	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	70.2908952068445	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGTCACTTTTTTTTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	134468495	134386512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392852_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134468438
ES.27366.8	chr5	-	3751	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	111	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_30	59.8322562577151	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485319	134386509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.81	chr5	-	3402	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_30	73.8476284129844	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134484788	134386516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439835_134439964_134443988_134444131_134445906_134446036_134484748
ES.27366.84	chr5	-	4578	29	NNC	ENSMUSG00000023079.15	novel	3487	29	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_22	71.2709689874367	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485554	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417280_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431044_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.86	chr5	-	4162	27	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	70	0	intron_retention	FALSE	canonical	0	0	junction_22	69.0681530324477	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134444040	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988
ES.27366.87	chr5	-	5352	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.1097272749818	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485633	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134393980_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413937_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.88	chr5	-	3471	31	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	65.774057702613	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485480	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412757_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.89	chr5	-	3433	29	NNC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	74.4858567591382	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485108	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386748_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419811_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.91	chr5	-	3537	30	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	69.801434012846	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485603	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395750_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.92	chr5	-	3552	30	NNC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	80.2002102351347	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485152	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413937_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419802_134424468_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.93	chr5	-	5363	28	NIC	ENSMUSG00000023079.15	novel	3461	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_27	54.2642015193211	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485110	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ES.27366.95	chr5	-	3417	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	70.404760898272	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485622	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432671_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.96	chr5	-	3444	29	NNC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.2392567544219	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485545	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134386751_134387841_134387999_134389827_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27366.98	chr5	-	4762	29	NIC	ENSMUSG00000023079.15	novel	3693	30	NA	NA	-146	0	intron_retention	FALSE	canonical	3	16	junction_11	65.6470444024368	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	False	NA	NA	False	TTTAAA	-6	NA	134485716	134386532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ES.27367.1	chr5	-	185	1	Intergenic	novelGene_22805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCTAAAAAAACCCCT	4044	False	NA	NA	False	NA	NA	NA	134516273	134516088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134516100_134516300
ES.27368.1	chr5	+	178	1	Intergenic	novelGene_22806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAGCGGCACTT	NA	False	NA	5	True	NA	NA	NA	134558303	134558481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134558300_134558500
ES.27369.1	chr5	+	157	1	Intergenic	novelGene_22807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	134566726	134566883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134566700_134566900
ES.2737.1	chr10	+	1958	1	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	95913	2125	95913	-2125	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	45039211	45041169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_45039200_45041200
ES.27370.1	chr5	-	4931	16	FSM	ENSMUSG00000063146.12	ENSMUST00000036999.10	4893	16	-39	1	-39	-1	multi-exon	FALSE	canonical	0	0	junction_5	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGCTGCTGCCTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	134581327	134518237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134519647_134520746_134520810_134521072_134521259_134523062_134523223_134525082_134525240_134526943_134527028_134528945_134529004_134531379_134532316_134539016_134539078_134542849_134542954_134544934_134545133_134545669_134545884_134546760_134546886_134551439_134551997_134563900_134564092_134580899
ES.27371.1	chr5	+	193	1	Intergenic	novelGene_22808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAGGTGTGTGTTAC	NA	False	NA	NA	False	NA	NA	NA	134610595	134610788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134610600_134610800
ES.27372.1	chr5	-	159	1	Intergenic	novelGene_22809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGATACTTTCTGGCCA	3998	False	NA	NA	False	NA	NA	NA	134610993	134610834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134610800_134611000
ES.27373.1	chr5	+	1501	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	22	3472	22	5	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCTTAATTGCTTGCG	NA	False	NA	24	True	GATAAA	-20	NA	134611565	134627187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.10	chr5	+	4945	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	57	-7	-10	7	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTTCCTGCTTTTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	134611600	134630666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.12	chr5	+	1393	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	405.00538268028	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTTGCTATGCTTAATT	NA	False	NA	17	True	GATAAA	-13	NA	134611603	134627180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622138_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.14	chr5	+	1594	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1115	junction_6	97.4095338452588	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611608	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.15	chr5	+	2067	10	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	425.487897145482	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611610	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620539_134622753_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.17	chr5	+	1513	11	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	400.254181739554	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611612	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624072_134624218_134625735_134625850_134626702
ES.27373.18	chr5	+	3882	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	2	464	intron_retention	FALSE	canonical	3	1115	junction_6	101.321271211923	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTGTTGTTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	134611612	134627646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.19	chr5	+	3256	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_7	582.605248889038	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611614	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134620361_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.2	chr5	+	1927	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	55	3013	-12	464	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTGTTGTTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	134611598	134627646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.20	chr5	+	7653	6	FSM	ENSMUSG00000023104.10	ENSMUST00000201674.2	967	6	9	-6695	9	1	multi-exon	FALSE	canonical	3	1227	junction_5	81.2147769805471	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCTATGCTTAATTGCT	NA	False	NA	20	True	GATAAA	-16	NA	134611619	134627183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972
ES.27373.21	chr5	+	4272	9	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	9	-1	intron_retention	FALSE	canonical	3	1227	junction_5	79.2140099666719	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611619	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.22	chr5	+	2585	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	499.774097728494	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611620	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134616528_134617674_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.23	chr5	+	2800	9	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_6	450.95050656918	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611620	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134623062_134623129_134624136_134625850_134626702
ES.27373.24	chr5	+	1487	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	403.030222191835	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTTGCTATGCTTAATT	NA	False	NA	17	True	GATAAA	-13	NA	134611621	134627180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134621993_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.25	chr5	+	1598	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	11	30	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAAACCAGCGTCTTTC	NA	False	NA	49	True	GATAAA	-45	NA	134611621	134627212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.26	chr5	+	1069	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	11	116	combination_of_known_splicesites	FALSE	canonical	1	10	junction_9	422.996220395804	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTTGAACTCCCG	NA	False	NA	47	True	NA	NA	NA	134611621	134626925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134626702
ES.27373.27	chr5	+	1401	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	405.480320114306	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTTGCTATGCTTAATT	NA	False	NA	17	True	GATAAA	-13	NA	134611621	134627180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625772_134625850_134626702
ES.27373.28	chr5	+	1820	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1115	junction_6	98.9127312081803	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611621	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.3	chr5	+	1951	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	393.636748792589	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611598	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134612229_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.31	chr5	+	3462	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	22	0	intron_retention	FALSE	canonical	1	2	junction_7	419.601604111375	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611632	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624072_134624218_134625735_134625850_134626702
ES.27373.32	chr5	+	4488	3	NIC	ENSMUSG00000023104.10	novel	831	4	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	1232	junction_1	24.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	6327	False	NA	18	True	GATAAA	-14	NA	134620322	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134624218_134625735_134625850_134626702
ES.27373.33	chr5	+	2047	4	NIC	ENSMUSG00000023104.10	novel	671	6	NA	NA	344	0	intron_retention	FALSE	canonical	3	1115	junction_1	69.6387503876653	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	7907	False	NA	19	True	GATAAA	-15	NA	134621902	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134622201_134623062_134624218_134625735_134625850_134626702
ES.27373.34	chr5	+	2969	2	NIC	ENSMUSG00000023104.10	novel	831	4	NA	NA	388	0	intron_retention	FALSE	canonical	3	1281	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	9365	False	NA	19	True	GATAAA	-15	NA	134623360	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134625850_134626702
ES.27373.35	chr5	+	173	1	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	18626	317	7197	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCCAGT	NA	False	NA	NA	False	NA	NA	NA	134630169	134630342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_134630200_134630300
ES.27373.4	chr5	+	1556	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	393.636748792589	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTGCTATGCTTAATTG	NA	False	NA	18	True	GATAAA	-14	NA	134611598	134627181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611835_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.5	chr5	+	3432	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1115	junction_6	101.321271211923	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611598	134627182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.6	chr5	+	3538	11	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_4	532.397605178686	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTTGCTATGCTTAATT	NA	False	NA	17	True	GATAAA	-13	NA	134611598	134627180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619024_134619133_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.7	chr5	+	1305	10	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	425.487897145482	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCTATGCTTAATTGCT	NA	False	NA	20	True	GATAAA	-16	NA	134611599	134627183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.8	chr5	+	1185	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	56	3754	-11	96	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTCTCTTGTACCCC	NA	False	NA	27	True	NA	NA	NA	134611599	134626905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27373.9	chr5	+	5774	8	NIC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	1115	junction_4	103.104266623251	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTTGCTATGCTTAATT	NA	False	NA	17	True	GATAAA	-13	NA	134611599	134627180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134611741_134615751_134618316_134619729_134619832_134619972_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ES.27374.1	chr5	+	185	1	Intergenic	novelGene_22810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134645372	134645557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134645400_134645600
ES.27375.1	chr5	-	2613	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	-219	-27	-76	27	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGTGAACCTTGGGGT	9802	False	NA	23	True	AATAAA	-45	NA	134668420	134648703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.12	chr5	-	1725	3	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	17306	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1095	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTATGCTTGTCTTTCT	6707	False	NA	-6	True	AATAAA	-16	NA	134650850	134648732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134649272_134649364_134650503_134650802
ES.27375.13	chr5	-	2510	7	NNC	ENSMUSG00000040731.14	novel	2726	7	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	882.696059430047	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTATGCTTGTCTTTCT	9935	False	NA	-6	True	AATAAA	-16	NA	134668287	134648732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650503_134650802_134650934_134653288_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.14	chr5	-	2300	7	NNC	ENSMUSG00000040731.14	novel	2726	7	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	801.478720172213	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2200	False	NA	-7	True	AATAAA	-15	NA	134668181	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134649774_134649817_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.15	chr5	-	2367	6	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	877.974851576057	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2202	False	NA	-7	True	AATAAA	-15	NA	134668179	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650503_134650802_134650966_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.16	chr5	-	3918	7	NNC	ENSMUSG00000040731.14	novel	2726	7	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	882.696059430047	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2223	False	NA	-7	True	AATAAA	-15	NA	134668158	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650503_134650802_134652478_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.17	chr5	-	2339	6	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	860.759757423638	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2200	False	NA	-7	True	AATAAA	-15	NA	134668181	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656632_134668101
ES.27375.18	chr5	-	3016	6	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	877.974851576057	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2202	False	NA	-7	True	AATAAA	-15	NA	134668179	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650503_134650802_134650941_134653545_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.19	chr5	-	2304	6	NNC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	851.454191369095	1459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2226	False	NA	-7	True	AATAAA	-15	NA	134668155	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134650489_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.2	chr5	-	2599	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	-25	152	-25	4	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGTCTTTCTGGCCAC	9853	False	NA	0	True	AATAAA	-22	NA	134668369	134648726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.20	chr5	-	5900	4	FSM	ENSMUSG00000040731.14	ENSMUST00000200874.2	896	4	-2	-5002	-2	-3	multi-exon	FALSE	canonical	3	2106	junction_3	61.0482504981829	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2223	False	NA	-7	True	AATAAA	-15	NA	134668158	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.21	chr5	-	2479	6	NIC	ENSMUSG00000040731.14	novel	2726	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	761	junction_3	665.768908856519	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTATGCTTGTCTTTC	2203	False	NA	-7	True	AATAAA	-15	NA	134668178	134648733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654460_134656441_134656630_134668094
ES.27375.25	chr5	-	903	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	17	1447	-5	-1447	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTAGTGCCTGTTTTGTG	2197	False	NA	-1	True	NA	NA	NA	134668184	134650177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.26	chr5	-	2543	4	FSM	ENSMUSG00000040731.14	ENSMUST00000200874.2	896	4	-22	-1625	1	622	multi-exon	FALSE	canonical	3	2106	junction_3	61.0482504981829	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGCCCTTCCCATTGT	2203	False	NA	NA	False	CATAAA	-16	NA	134668178	134652110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.27	chr5	-	1260	4	NNC	ENSMUSG00000040731.14	novel	896	4	NA	NA	1	347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1053.82488530538	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTGATCTCTTTGTGT	2203	False	NA	NA	False	NA	NA	NA	134668178	134653388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134654317_134654394_134654460_134656441_134656632_134668101
ES.27375.28	chr5	-	2409	1	FSM	ENSMUSG00000040731.14	ENSMUST00000201263.2	1849	1	-17	-543	-2	543	mono-exon	FALSE	NA	NA	NA	NA	NA	1243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCTCTTTGAATTGAAA	2200	False	NA	NA	False	NA	NA	NA	134668181	134665772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134665800_134668200
ES.27375.4	chr5	-	5713	5	NIC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	-66	1	intron_retention	FALSE	canonical	3	2106	junction_4	52.878989211217	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	9955	False	NA	-3	True	AATAAA	-19	NA	134668267	134648729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134650503_134650802_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.5	chr5	-	4884	6	NIC	ENSMUSG00000040731.14	novel	2726	7	NA	NA	41	1	intron_retention	FALSE	canonical	3	761	junction_2	574.251025249411	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	9919	False	NA	-3	True	AATAAA	-19	NA	134668303	134648729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134650503_134650802_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.6	chr5	-	6009	3	NIC	ENSMUSG00000040731.14	novel	896	4	NA	NA	-6	1	intron_retention	FALSE	canonical	3	2106	junction_2	64.5	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2196	False	NA	-3	True	AATAAA	-19	NA	134668185	134648729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134654460_134656441_134656630_134668094
ES.27375.7	chr5	-	5062	5	FSM	ENSMUSG00000040731.14	ENSMUST00000202289.4	1057	5	-2	-4003	-2	1	multi-exon	FALSE	canonical	3	761	junction_1	622.036373534539	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCTTGTCTTTCTGGC	2200	False	NA	-3	True	AATAAA	-19	NA	134668181	134648729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ES.27375.9	chr5	-	5710	4	NIC	ENSMUSG00000040731.14	novel	2367	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	2106	junction_3	53.4602656184946	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATGCTTGTCTTTCTGG	2194	False	NA	-4	True	AATAAA	-18	NA	134668187	134648730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134650503_134650802_134654460_134656441_134656630_134668094
ES.27376.1	chr5	-	2335	1	Intergenic	novelGene_22811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATATCTGGATATC	4302	False	NA	NA	False	NA	NA	NA	134684342	134682007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134682000_134684300
ES.27377.1	chr5	+	987	1	Intergenic	novelGene_22813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCATCCCCCCCCCCA	7847	False	NA	NA	False	NA	NA	NA	134711406	134712393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134711400_134712400
ES.27378.1	chr5	-	3487	17	NIC	ENSMUSG00000029674.14	novel	3331	16	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	6.22965438447431	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTGTGTGTCTGAG	5775	False	NA	0	True	AATAAA	-33	NA	134717443	134684892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690242_134690408_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ES.27378.2	chr5	-	3403	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	-73	1	-73	0	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTGTGTGTGTCTGA	5693	False	NA	-1	True	AATAAA	-32	NA	134717525	134684893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ES.27378.4	chr5	-	3243	15	NIC	ENSMUSG00000029674.14	novel	3331	16	NA	NA	-10	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	5.40408009125078	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGGGGCTTGCATCCTCG	5780	False	NA	-14	True	AATAAA	-19	NA	134717438	134684906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ES.27378.5	chr5	-	4229	16	NNC	ENSMUSG00000029674.14	novel	3331	16	NA	NA	-5	7	intron_retention	FALSE	non_canonical	0	0	junction_4	5.25187797099497	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAATATGGAAGAGA	5761	False	NA	NA	False	ATTAAA	-20	NA	134717457	134685045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134689267_134690009_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ES.27378.6	chr5	-	2615	13	NNC	ENSMUSG00000029674.14	novel	3331	16	NA	NA	-107	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.6248456768954	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCCAAACTTTGTCT	5659	False	NA	NA	False	NA	NA	NA	134717559	134687960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698148_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ES.27378.7	chr5	-	175	1	Intergenic	novelGene_22812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134691640	134691465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134691500_134691600
ES.27379.1	chr5	+	180	1	Intergenic	novelGene_22814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	134767282	134767462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134767300_134767500
ES.2738.1	chr10	+	1299	5	NNC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	-31	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	10.280442597476	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTACTGTTATAATGG	NA	False	NA	NA	False	AATAAA	-19	NA	45165466	45194219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45165672_45190656_45191005_45191163_45191376_45192526_45192636_45193794
ES.2738.10	chr10	+	1646	8	FSM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	-56	2778	-56	-2778	multi-exon	FALSE	canonical	2	3	junction_7	2.44114392723358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAATTGACTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	45211811	45245797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45211978_45215315_45215553_45219129_45219255_45222222_45222411_45223880_45223990_45229845_45230014_45230846_45230989_45245286
ES.2738.11	chr10	+	1804	8	NNC	ENSMUSG00000071317.5	novel	494	2	NA	NA	140	-2778	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.28881840949181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAATTGACTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	45212007	45245797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45212332_45215315_45215553_45219129_45219255_45222222_45222411_45223880_45223990_45229845_45230014_45230846_45230989_45245286
ES.2738.2	chr10	+	1433	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	81	339	-16	-4	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCACGTATTCCTTACT	NA	False	NA	NA	False	AATAAA	-9	NA	45165481	45194209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ES.2738.3	chr10	+	1379	4	FSM	ENSMUSG00000019848.15	ENSMUST00000161803.2	1369	4	-6	-4	-6	4	multi-exon	FALSE	canonical	2	2	junction_2	13.6707311029399	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCCTTACTGTTATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	45165491	45194217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45165672_45190656_45191376_45192578_45192636_45193794
ES.2738.4	chr10	+	3097	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	91	-1335	-6	1335	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCAATTTGAAGACTAC	NA	False	NA	NA	False	AATAAA	-16	NA	45165491	45195883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ES.2738.5	chr10	+	2891	3	NIC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	-5	-21	intron_retention	FALSE	canonical	3	31	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAACAATAACATGCCA	NA	False	NA	NA	False	AATAAA	-3	NA	45165492	45194527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45165672_45190656_45192636_45193794
ES.2738.6	chr10	+	3053	11	Fusion	ENSMUSG00000071317.5_ENSMUSG00000019848.15	novel	1369	4	NA	NA	-5	-2773	multi-exon	FALSE	canonical	0	0	junction_3	9.01110426085505	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTTTTTTTATGGCA	NA	False	NA	NA	False	ATTAAA	-18	NA	45165492	45245802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_45165672_45190656_45191376_45192578_45192636_45200754_45201474_45215315_45215553_45219129_45219208_45222222_45222411_45223939_45223990_45229845_45230014_45230846_45230989_45245286
ES.2738.7	chr10	+	1808	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	122	-77	25	77	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAGTGCATAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	45165522	45194625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ES.2738.8	chr10	+	1368	4	NNC	ENSMUSG00000019848.15	novel	784	3	NA	NA	3076	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	14.1656862405839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTTACTGTTATAATG	NA	False	NA	NA	False	AATAAA	-18	NA	45168573	45194218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45168690_45190656_45191376_45192526_45192636_45193794
ES.2738.9	chr10	+	4425	8	FSM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	-57	0	-57	0	multi-exon	FALSE	canonical	2	3	junction_7	2.44114392723358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTGTATTTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	45211810	45248575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45211978_45215315_45215553_45219129_45219255_45222222_45222411_45223880_45223990_45229845_45230014_45230846_45230989_45245286
ES.27380.1	chr5	-	3569	37	NNC	ENSMUSG00000029675.13	novel	3853	37	NA	NA	6865	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.797372227467074	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGGGATGATGTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	134769235	134731692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_134732679_134733383_134733435_134734141_134734172_134734594_134734640_134735218_134735270_134735419_134735459_134736363_134736505_134736674_134736738_134736825_134736928_134738960_134739000_134739915_134740075_134741259_134741320_134741403_134741545_134742848_134742909_134744100_134744203_134744537_134744586_134745281_134745372_134745845_134745900_134746874_134747022_134747842_134747903_134747986_134748077_134750470_134750519_134750888_134750934_134751317_134751360_134753772_134753845_134754622_134754653_134755321_134755394_134757243_134757292_134757981_134758045_134758124_134758287_134758498_134758601_134759918_134759955_134761386_134761417_134765156_134765190_134766017_134766054_134768363_134768427_134769106
ES.27381.1	chr5	+	203	1	Intergenic	novelGene_22815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCACACAACAATACCAGAG	NA	False	NA	NA	False	NA	NA	NA	134848772	134848975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_134848800_134849000
ES.27382.1	chr5	-	136	1	Intergenic	novelGene_22816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTCACTCTTAA	241	False	NA	NA	False	NA	NA	NA	134932438	134932302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134932300_134932400
ES.27383.1	chr5	+	1390	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	-22	1440	-22	-5	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3390	False	NA	11	True	NA	NA	NA	134961199	134970051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.10	chr5	+	1936	6	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-4	42	intron_retention	FALSE	canonical	3	24	junction_5	33.3610551391889	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3425	False	NA	NA	False	AATAAA	-11	NA	134961234	134970619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ES.27383.11	chr5	+	2363	2	NNC	ENSMUSG00000040557.15	novel	1796	5	NA	NA	-4	49	intron_retention	FALSE	canonical	0	0	junction_1	0	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGATCTGATTTATGG	3425	False	NA	NA	False	AATAAA	-18	NA	134961234	134970626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134962282_134969310
ES.27383.12	chr5	+	1401	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	-10	-4	-3	4	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATACAAC	3426	False	NA	20	True	NA	NA	NA	134961235	134970060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.13	chr5	+	2133	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-3	42	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3426	False	NA	NA	False	AATAAA	-11	NA	134961235	134970619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.14	chr5	+	2762	4	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	0	49	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGATCTGATTTATGG	3429	False	NA	NA	False	AATAAA	-18	NA	134961238	134970626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.15	chr5	+	2908	3	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	3	2	intron_retention	FALSE	canonical	3	98	junction_2	6	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGTGTGTACTGTAACA	3432	False	NA	6	True	NA	NA	NA	134961241	134970088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134963279_134964632_134964726_134969310
ES.27383.16	chr5	+	1283	6	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_1	42.8579047551324	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3436	False	NA	11	True	NA	NA	NA	134961245	134970051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961303_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.17	chr5	+	1409	6	FSM	ENSMUSG00000040557.15	ENSMUST00000201847.3	721	6	-125	-563	-7	-5	multi-exon	FALSE	canonical	3	6	junction_1	40.4791304254427	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3443	False	NA	11	True	NA	NA	NA	134961252	134970051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.18	chr5	+	1283	5	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-5	-268	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGCGGCTGTCTTCA	3445	False	NA	NA	False	NA	NA	NA	134961254	134969788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.19	chr5	+	1174	7	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-4	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	42.3070784726255	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAGAAAAAAAATAA	3446	False	NA	11	True	NA	NA	NA	134961255	134970051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ES.27383.2	chr5	+	2223	4	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-10	4	intron_retention	FALSE	canonical	3	98	junction_3	4.92160768674447	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATACAAC	3402	False	NA	20	True	NA	NA	NA	134961211	134970060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.20	chr5	+	1776	7	NIC	ENSMUSG00000040557.15	novel	721	6	NA	NA	-4	42	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	43.6211594934793	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3446	False	NA	NA	False	AATAAA	-11	NA	134961255	134970619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ES.27383.21	chr5	+	1571	1	ISM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	8665	34	571	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATAATAAAAAAAAAAG	3033	False	NA	NA	False	AATAGA	-3	NA	134969886	134971457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_134969900_134971500
ES.27383.3	chr5	+	3256	4	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	-8	42	intron_retention	FALSE	canonical	3	37	junction_1	31.961782734315	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3404	False	NA	NA	False	AATAAA	-11	NA	134961213	134970619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961265_134961475_134963279_134964632_134964726_134969310
ES.27383.4	chr5	+	2035	4	NNC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_1	49.2702299117383	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATACAAC	3416	False	NA	20	True	NA	NA	NA	134961225	134970060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_134962282_134963142_134963279_134964632_134964726_134969310
ES.27383.5	chr5	+	2002	6	FSM	ENSMUSG00000040557.15	ENSMUST00000201847.3	721	6	-152	-1129	-1	40	multi-exon	FALSE	canonical	3	6	junction_1	40.4791304254427	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAATGGGGTGATCT	3416	False	NA	NA	False	AATAAA	-9	NA	134961225	134970617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.6	chr5	+	2568	5	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	1	42	intron_retention	FALSE	canonical	3	24	junction_4	34.7589916424513	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGGGGTGATCTGA	3418	False	NA	NA	False	AATAAA	-11	NA	134961227	134970619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ES.27383.7	chr5	+	1580	5	NIC	ENSMUSG00000040557.15	novel	1387	6	NA	NA	3	4	intron_retention	FALSE	canonical	3	98	junction_4	6.17960354715414	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATACAAC	3420	False	NA	20	True	NA	NA	NA	134961229	134970060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ES.27383.8	chr5	+	1243	7	NIC	ENSMUSG00000040557.15	novel	721	6	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	43.6211594934793	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATACAAC	3420	False	NA	20	True	NA	NA	NA	134961229	134970060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134961436_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310_134969548_134969745
ES.27383.9	chr5	+	3249	2	NIC	ENSMUSG00000040557.15	novel	1796	5	NA	NA	3	-158	intron_retention	FALSE	canonical	2	2	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATGTAGAGCACTT	3420	False	NA	NA	False	NA	NA	NA	134961229	134971333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_134962456_134969310
ES.27384.1	chr5	-	2036	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	-224	4	-224	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGGCTGTTCTCTATC	NA	False	NA	-13	True	AATAAA	-21	NA	134976012	134973976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_134974000_134976000
ES.27384.2	chr5	-	2001	2	Genic_Genomic	ENSMUSG00000047501.4	novel	1816	1	NA	NA	-34988	-7	multi-exon	FALSE	canonical	1	10	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTTTGGGCTGTTCTCT	2414	False	NA	-16	True	AATAAA	-18	NA	135010776	134973979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_134975775_135010570
ES.27384.3	chr5	-	1668	2	Genic_Genomic	ENSMUSG00000047501.4	novel	1816	1	NA	NA	80	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTTTGGGCTGTTCTC	NA	False	NA	-17	True	AATAAA	-17	NA	134975708	134973980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_134974181_134974240
ES.27384.4	chr5	-	179	1	Intergenic	novelGene_22817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAAAGGATTTGTG	9454	False	NA	NA	False	NA	NA	NA	134999395	134999216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_134999200_134999400
ES.27385.1	chr5	+	1447	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	-187	-1	-187	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGGAGCTTCCTTATC	4854	False	NA	39	True	AATAAA	-19	NA	135014880	135016327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135014900_135016300
ES.27386.1	chr5	+	1953	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135037976	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
ES.27386.10	chr5	+	1113	6	NNC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.685723491613	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCCTGGATCCGTTTT	NA	False	NA	6	True	AATAAA	-13	NA	135038517	135041020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040746
ES.27386.11	chr5	+	1514	3	FSM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	-41	2	-26	-2	multi-exon	FALSE	canonical	3	589	junction_1	28.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038518	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038972_135039740_135040520_135040740
ES.27386.12	chr5	+	1425	4	NNC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	-21	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	269.360147180107	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038523	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040721
ES.27386.13	chr5	+	1263	5	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	445	junction_1	73.3314393694819	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038524	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038694_135038835_135038972_135039740_135040235_135040337_135040520_135040740
ES.27386.14	chr5	+	1225	5	FSM	ENSMUSG00000040532.15	ENSMUST00000148831.3	731	5	-302	-192	-20	-2	multi-exon	FALSE	canonical	3	19	junction_2	251.938980707631	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038524	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038972_135039740_135039915_135040094_135040235_135040337_135040520_135040740
ES.27386.16	chr5	+	1565	3	ISM	ENSMUSG00000040532.15	ENSMUST00000123227.3	1466	4	1	3	1	-3	intron_retention	FALSE	canonical	3	445	junction_1	72	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTGGATCCGTTTTC	NA	False	NA	7	True	AATAAA	-14	NA	135038545	135041021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135038694_135038835_135038972_135039740
ES.27386.17	chr5	+	1043	6	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	232.107733606616	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTGGATCCGTTTTC	NA	False	NA	7	True	AATAAA	-14	NA	135038565	135041021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038694_135038864_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ES.27386.19	chr5	+	4016	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	486	-3029	-31	3024	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTACCTCTTCATTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	135038795	135044053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ES.27386.2	chr5	+	2169	3	NIC	ENSMUSG00000040532.15	novel	1466	4	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	552	junction_2	18.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135037981	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038972_135039740_135040235_135040337
ES.27386.20	chr5	+	1242	3	NNC	ENSMUSG00000040532.15	novel	1475	3	NA	NA	-17	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	294.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038809	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135038972_135039740_135040520_135040721
ES.27386.3	chr5	+	1031	6	FSM	ENSMUSG00000040532.15	ENSMUST00000111216.8	972	6	-22	-37	-22	-2	multi-exon	FALSE	canonical	2	3	junction_1	236.865024855929	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135037983	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038070_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ES.27386.4	chr5	+	2228	2	ISM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	-284	2	20	-2	intron_retention	FALSE	canonical	3	589	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038025	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135038972_135039740
ES.27386.5	chr5	+	1615	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	-144	2	13	-2	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038165	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ES.27386.6	chr5	+	1167	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	319	7	-73	-2	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038471	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ES.27386.7	chr5	+	1400	4	NIC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	445	junction_1	84.581321815162	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038490	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038694_135038835_135038972_135039740_135040520_135040740
ES.27386.8	chr5	+	1391	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	-52	-2	intron_retention	FALSE	canonical	3	573	junction_2	31.3297870333578	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	False	NA	8	True	AATAAA	-15	NA	135038492	135041022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135038972_135039740_135039915_135040063_135040520_135040740
ES.27386.9	chr5	+	1140	6	NNC	ENSMUSG00000040532.15	novel	1493	6	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	221.685723491613	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCTGGATCCGTTTTC	NA	False	NA	7	True	AATAAA	-14	NA	135038516	135041021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040721
ES.27387.1	chr5	-	490	4	FSM	ENSMUSG00000085042.9	ENSMUST00000136022.8	604	4	105	9	6	-1	multi-exon	FALSE	canonical	2	3	junction_3	14.0079342596338	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGGACCCTCTCCGTG	NA	False	NA	-9	True	ATTAAA	-20	NA	135042002	135040976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135041187_135041283_135041405_135041547_135041643_135041938
ES.27388.1	chr5	-	160	1	Intergenic	novelGene_22818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7671	False	NA	NA	False	NA	NA	NA	135045745	135045585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135045600_135045700
ES.27389.1	chr5	+	175	1	Intergenic	novelGene_22819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAGGACAG	5233	False	NA	NA	False	NA	NA	NA	135046378	135046553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135046400_135046600
ES.2739.1	chr10	-	624	1	Intergenic	novelGene_2084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATGAATAGCGATG	NA	False	NA	NA	False	NA	NA	NA	45212984	45212360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45212400_45213000
ES.27390.1	chr5	-	182	1	Intergenic	novelGene_22820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGATGAATGAAAAA	4283	False	NA	NA	False	NA	NA	NA	135049133	135048951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135049000_135049100
ES.27391.1	chr5	+	2220	10	FSM	ENSMUSG00000007207.11	ENSMUST00000150838.2	2167	10	-54	1	-1	0	multi-exon	FALSE	canonical	3	9	junction_4	7.53428378140653	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCCTCTGTTTGGAAC	NA	False	NA	14	True	AATAAA	-14	NA	135052359	135079953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077764_135077959_135078680
ES.27391.2	chr5	+	2169	10	NNC	ENSMUSG00000007207.11	novel	2162	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	4.42495727816442	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCCTCTGTTTGGAAC	NA	False	NA	14	True	AATAAA	-14	NA	135052362	135079953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077564_135077711_135078680
ES.27391.3	chr5	+	2368	8	ISM	ENSMUSG00000007207.11	ENSMUST00000150838.2	2167	10	-6	3703	-6	-1433	5prime_fragment	FALSE	canonical	3	9	junction_4	2.71804251292006	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCCGTGTGTCTGTGTGT	NA	False	NA	NA	False	TTTAAA	-14	NA	135052407	135076251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450
ES.27391.4	chr5	+	173	1	Intergenic	novelGene_22821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135060604	135060777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135060600_135060800
ES.27391.5	chr5	+	4653	4	NNC	ENSMUSG00000007207.11	novel	2114	7	NA	NA	1322	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.5303793326209	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTCTGTTTGGAACAT	7204	False	NA	16	True	AATAAA	-16	NA	135071441	135079955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135071521_135074450_135076911_135077119_135077959_135078680
ES.27391.6	chr5	+	169	1	Intergenic	novelGene_22822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	135076927	135077096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135076900_135077100
ES.27392.1	chr5	+	176	1	Intergenic	novelGene_22823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAACCA	754	False	NA	NA	False	NA	NA	NA	135090677	135090853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135090700_135090900
ES.27393.1	chr5	-	1348	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	528	-12	-48	12	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCATGAGCCGGTGTC	NA	False	NA	11	True	ATTAAA	-28	NA	135092992	135081798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ES.27393.10	chr5	-	4165	9	NIC	ENSMUSG00000005378.18	novel	826	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	942	junction_2	59.9807260709638	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092949	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135092776_135092867
ES.27393.11	chr5	-	3318	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	301.451639420141	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092940	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135091831_135092333_135092776_135092867
ES.27393.12	chr5	-	6577	8	NIC	ENSMUSG00000005378.18	novel	826	11	NA	NA	-28	0	intron_retention	FALSE	canonical	3	972	junction_6	54.0842124914131	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092972	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135092776_135092867
ES.27393.13	chr5	-	1378	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	301.451639420141	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGTGTCCCTGGCCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	135092957	135081813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092657_135092776_135092867
ES.27393.14	chr5	-	1468	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	300.297153108865	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGTGTCCCTGGCCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	135092941	135081813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085968_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ES.27393.15	chr5	-	4173	7	NIC	ENSMUSG00000005378.18	novel	1607	11	NA	NA	219	-1	intron_retention	FALSE	canonical	3	942	junction_2	48.1756047070391	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGTGTCCCTGGCCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	135092399	135081813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926
ES.27393.17	chr5	-	1616	10	NIC	ENSMUSG00000005378.18	novel	826	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	942	junction_2	56.8565446247542	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGTGTCCCTGGCCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	135092940	135081813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135090199_135092737_135092776_135092867
ES.27393.18	chr5	-	4845	7	NIC	ENSMUSG00000005378.18	novel	826	11	NA	NA	11	-1	intron_retention	FALSE	canonical	3	942	junction_2	65.6928881657334	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGTGTCCCTGGCCCT	NA	False	NA	-4	True	ATTAAA	-13	NA	135092921	135081813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135085782_135086473_135086525_135087960_135088058_135089587_135092776_135092867
ES.27393.2	chr5	-	3917	10	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	942	junction_2	59.736664920319	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	-1	True	ATTAAA	-16	NA	135092941	135081810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135092776_135092867
ES.27393.20	chr5	-	5150	10	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	4	-51	intron_retention	FALSE	canonical	3	966	junction_6	52.4150105726722	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAAGGATGCTTTATTT	NA	False	NA	-21	True	NA	NA	NA	135092940	135081863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ES.27393.21	chr5	-	1051	12	ISM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	580	233	4	95	3prime_fragment	FALSE	canonical	3	942	junction_2	58.9567708278386	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGAGGCTCTCAA	NA	False	NA	NA	False	NA	NA	NA	135092940	135082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867
ES.27393.22	chr5	-	130	1	FSM	ENSMUSG00000088008.3	ENSMUST00000157383.3	129	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAACTTGACTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	135082971	135082841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135082800_135083000
ES.27393.3	chr5	-	3847	11	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	-22	0	intron_retention	FALSE	canonical	3	942	junction_2	61.6088467673272	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092966	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135092776_135092867
ES.27393.5	chr5	-	1389	12	NNC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	300.041925445084	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092944	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092634_135092776_135092867
ES.27393.7	chr5	-	1507	12	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	300.041925445084	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092941	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092513_135092776_135092867
ES.27393.8	chr5	-	1244	11	NIC	ENSMUSG00000005378.18	novel	1607	11	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	308.621143151275	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092940	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092867
ES.27393.9	chr5	-	3053	10	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	942	junction_2	56.8565446247542	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTCCCTGGCCCTG	NA	False	NA	-3	True	ATTAAA	-14	NA	135092939	135081812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135090010_135090102_135090199_135092737_135092776_135092867
ES.27394.1	chr5	+	3479	2	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	26	3168	multi-exon	FALSE	canonical	1	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACACTATGTTTAAAA	3158	False	NA	NA	False	NA	NA	NA	135093081	135097884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_135094257_135095580
ES.27394.2	chr5	+	3701	3	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	27	3536	multi-exon	TRUE	non_canonical	0	0	junction_2	2	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATGACTCACCCTGTT	3159	False	NA	NA	False	NA	NA	NA	135093082	135098252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_135094257_135095580_135097518_135097662
ES.27394.3	chr5	+	1135	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	28	498	28	-498	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAATTTGTTTTTCTG	3160	False	NA	49	True	AAAAAG	-20	NA	135093083	135094218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135093100_135094200
ES.27394.4	chr5	+	3965	3	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	30	3803	multi-exon	FALSE	non_canonical	0	0	junction_2	2	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGTAAAGATGTTCAAA	3162	False	NA	NA	False	AATAAA	-2	NA	135093085	135098519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_135094257_135095580_135097518_135097662
ES.27394.5	chr5	+	1255	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	31	375	31	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTCTGTTATCTTTTGT	3163	False	NA	NA	False	NA	NA	NA	135093086	135094341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135093100_135094300
ES.27394.6	chr5	+	3797	2	Genic_Genomic	ENSMUSG00000061118.9	novel	1661	1	NA	NA	40	3500	multi-exon	FALSE	canonical	1	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	3172	False	NA	NA	False	NA	NA	NA	135093095	135098216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_135094257_135095580
ES.27395.1	chr5	-	1361	2	FSM	ENSMUSG00000043614.14	ENSMUST00000076203.3	1286	2	-73	-2	-73	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGCCCCGCCTCCTCTC	NA	False	NA	-3	True	NA	NA	NA	135107193	135101754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135102838_135106915
ES.27395.2	chr5	-	1507	4	NNC	ENSMUSG00000043614.14	novel	1544	4	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.8977121983832	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATGCCCCGCCTCCTC	NA	False	NA	-5	True	NA	NA	NA	135107079	135101756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135102838_135103247_135103338_135105311_135105484_135106915
ES.27395.3	chr5	-	1529	4	FSM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	8	7	8	-4	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGATGATGCCCCGCCT	NA	False	NA	-9	True	NA	NA	NA	135107112	135101760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135102838_135103247_135103331_135105311_135105484_135106915
ES.27395.4	chr5	-	3931	2	NIC	ENSMUSG00000043614.14	novel	1544	4	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	21	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGATGATGCCCCGCCT	NA	False	NA	-9	True	NA	NA	NA	135107123	135101760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135105484_135106915
ES.27396.1	chr5	+	181	1	Intergenic	novelGene_22824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1924	False	NA	NA	False	NA	NA	NA	135125671	135125852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135125700_135125900
ES.27397.1	chr5	+	177	1	Intergenic	novelGene_22825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGCAAAAAACTAAAC	85	False	NA	NA	False	NA	NA	NA	135128749	135128926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135128700_135128900
ES.27398.1	chr5	+	3253	17	NNC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	-75	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.23462810032416	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGGTGTTGGTGTGA	3332	False	NA	4	True	AATAAA	-17	NA	135135669	135166779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135136070_135142480_135142577_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162108_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.10	chr5	+	2670	12	NNC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.08974349394372	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGGTGTTGGTGTGA	3417	False	NA	4	True	AATAAA	-17	NA	135135754	135166779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135136070_135142480_135142577_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.11	chr5	+	3347	16	NIC	ENSMUSG00000005373.14	novel	3195	17	NA	NA	-1	5	intron_retention	FALSE	canonical	1	2	junction_9	6.36308799946134	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTGTTGGTGTGACT	3417	False	NA	6	True	AATAAA	-19	NA	135135754	135166781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161934_135162031_135162105_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.12	chr5	+	3453	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-13	182	1	-182	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCCTTTGAGTACTT	3421	False	NA	NA	False	NA	NA	NA	135135758	135167054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.13	chr5	+	3248	16	NNC	ENSMUSG00000005373.14	novel	3214	17	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	8.50777422256974	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAAGGGTTGGTGTTGG	3421	False	NA	-1	True	AATAAA	-12	NA	135135758	135166774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162212_135162514_135162607_135162728_135162800_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.14	chr5	+	3301	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-11	332	3	128	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTTTTGTTTTTT	3423	False	NA	NA	False	TATAAA	-26	NA	135135760	135166904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.15	chr5	+	5010	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-9	-1379	-4	1379	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGTTGCTTTGATTG	3425	False	NA	NA	False	NA	NA	NA	135135762	135168615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.16	chr5	+	5214	13	NIC	ENSMUSG00000005373.14	novel	3214	17	NA	NA	213	5	intron_retention	FALSE	canonical	3	18	junction_9	3.34995854037363	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTGTTGGTGTGACT	3647	False	NA	6	True	AATAAA	-19	NA	135135984	135166781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162514_135162607_135162976_135163340_135163465_135164204
ES.27398.17	chr5	+	4027	11	NNC	ENSMUSG00000005373.14	novel	3344	16	NA	NA	-11318	0	intron_retention	FALSE	canonical	0	0	junction_9	7.40877857679658	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGGGTTGGTGTTGGTG	1447	False	NA	1	True	AATAAA	-14	NA	135151145	135166776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164209_135164335_135166095
ES.27398.18	chr5	+	4464	9	NIC	ENSMUSG00000005373.14	novel	3207	17	NA	NA	-9872	2	intron_retention	FALSE	canonical	0	0	junction_6	7.96770826524164	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGTTGGTGTTGGTGTG	2893	False	NA	3	True	AATAAA	-16	NA	135152591	135166778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162514_135162607_135162728_135162807_135162976_135163340_135163465_135164204
ES.27398.19	chr5	+	3523	5	FSM	ENSMUSG00000005373.14	ENSMUST00000123370.3	789	5	-550	-2184	-529	0	multi-exon	FALSE	canonical	2	15	junction_2	4.41588043316392	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGGGTTGGTGTTGGTG	NA	False	NA	1	True	AATAAA	-14	NA	135161934	135166776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204
ES.27398.2	chr5	+	3363	16	NIC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	-36	3	intron_retention	FALSE	canonical	2	15	junction_12	3.71423687391577	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGGTGTTGGTGTGA	3371	False	NA	4	True	AATAAA	-17	NA	135135708	135166779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.20	chr5	+	1021	4	NNC	ENSMUSG00000005373.14	novel	3344	16	NA	NA	649	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.5566238822398	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTGGTGTTGGTGT	NA	False	NA	2	True	AATAAA	-15	NA	135163133	135166777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135163219_135163340_135163465_135164204_135164335_135166095
ES.27398.3	chr5	+	3220	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	-55	457	-28	3	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGGTGTTGGTGTGA	3379	False	NA	4	True	AATAAA	-17	NA	135135716	135166779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.4	chr5	+	3706	17	NNC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	-28	-182	intron_retention	FALSE	canonical	0	0	junction_8	9.4339811320566	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCCTTTGAGTACTT	3379	False	NA	NA	False	NA	NA	NA	135135716	135167054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135136070_135142480_135142577_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135159300_135159388_135161168_135161716_135161962_135162031_135162105_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.6	chr5	+	3526	14	NIC	ENSMUSG00000005373.14	novel	3214	17	NA	NA	-4	3	intron_retention	FALSE	canonical	3	21	junction_1	2.94525995678102	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGGTGTTGGTGTGA	3403	False	NA	4	True	AATAAA	-17	NA	135135740	135166779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162514_135162607_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.7	chr5	+	3585	16	NIC	ENSMUSG00000005373.14	novel	3622	17	NA	NA	2	-182	intron_retention	FALSE	canonical	3	18	junction_10	3.10268700752536	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCCTTTGAGTACTT	3409	False	NA	NA	False	NA	NA	NA	135135746	135167054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.8	chr5	+	3757	13	NIC	ENSMUSG00000005373.14	novel	3344	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	21	junction_1	3.05845821725043	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGGGTTGGTGTTGGTG	3416	False	NA	1	True	AATAAA	-14	NA	135135753	135166776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135162514_135162607_135162976_135163340_135163465_135164204_135164335_135166095
ES.27398.9	chr5	+	3329	16	NIC	ENSMUSG00000005373.14	novel	3195	17	NA	NA	-2	1	intron_retention	FALSE	canonical	1	2	junction_9	6.1340579282125	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGGTTGGTGTTGGTGT	3416	False	NA	2	True	AATAAA	-15	NA	135135753	135166777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161934_135162031_135162105_135162263_135162397_135162514_135162607_135162976_135163340_135163465_135164204_135164335_135166095
ES.27399.1	chr5	+	4403	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	-6	3091	-6	2848	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGATTCTTTGCTTGTGT	9484	False	NA	10	True	NA	NA	NA	135178504	135191523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.10	chr5	+	5565	6	NNC	ENSMUSG00000005374.14	novel	840	6	NA	NA	1	2844	intron_retention	FALSE	canonical	0	0	junction_5	92.8430934426466	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9520	False	NA	6	True	NA	NA	NA	135178540	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186654_135186859
ES.27399.11	chr5	+	2332	11	Fusion	ENSMUSG00000029681.13_ENSMUSG00000005374.14	novel	7488	7	NA	NA	1	6	multi-exon	FALSE	non_canonical	0	0	junction_1	101.079622080813	463	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTCTTGTTAGTACT	9520	False	NA	11	True	ATTAAA	-6	NA	135178540	135210691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135178710_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ES.27399.12	chr5	+	4211	6	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	1	2845	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	92.8430934426466	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTGATTCTTTGCTTG	9520	False	NA	7	True	NA	NA	NA	135178540	135191520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135188073
ES.27399.13	chr5	+	4212	6	FSM	ENSMUSG00000005374.14	ENSMUST00000005508.14	1368	6	1	-2845	1	2845	multi-exon	FALSE	canonical	2	7	junction_3	93.5037967143581	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTGATTCTTTGCTTG	9520	False	NA	7	True	NA	NA	NA	135178540	135191520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135186385_135186513_135187457_135187611_135188073
ES.27399.14	chr5	+	7896	5	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	1	2844	intron_retention	FALSE	canonical	3	208	junction_2	17.0642169465815	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9520	False	NA	6	True	NA	NA	NA	135178540	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457
ES.27399.17	chr5	+	4510	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	1	2846	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGATTCTTTGCTTGT	9525	False	NA	8	True	NA	NA	NA	135178545	135191521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.18	chr5	+	3954	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	2	2420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.5257338605874	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCAAGCTTTTGATAT	9526	False	NA	10	True	AATAAA	-20	NA	135178546	135191095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186534_135187457_135187611_135188073
ES.27399.19	chr5	+	4587	6	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	2	4	intron_retention	FALSE	canonical	3	208	junction_2	18.9905239527507	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTCTCTCTCTGTTTCT	9526	False	NA	NA	False	NA	NA	NA	135178546	135188679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.2	chr5	+	3962	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	16	3510	-13	2429	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGATATACTTTGTTT	9506	False	NA	19	True	AATAAA	-29	NA	135178526	135191104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.20	chr5	+	5094	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	3	2843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.5257338605874	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCATGGTGATTCTTTGCT	9527	False	NA	5	True	NA	NA	NA	135178547	135191518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186654_135186859_135187611_135188073
ES.27399.21	chr5	+	7454	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	37	-3	3	3	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCGTCAAATCATTTT	9527	False	NA	NA	False	AATAAA	-13	NA	135178547	135194617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.22	chr5	+	1516	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	37	5935	3	4	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTCTCTCTCTGTTTCT	9527	False	NA	NA	False	NA	NA	NA	135178547	135188679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.23	chr5	+	7430	6	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	3	2848	intron_retention	FALSE	canonical	3	208	junction_2	18.9905239527507	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGATTCTTTGCTTGTGT	9527	False	NA	10	True	NA	NA	NA	135178547	135191523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.24	chr5	+	5995	8	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	5	-1888	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	108.248014545585	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGACTCCCTGGTGGT	9529	False	NA	15	True	NA	NA	NA	135178549	135192726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135187789
ES.27399.25	chr5	+	3897	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	5	2416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.5257338605874	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGACCAAGCTTTTG	9529	False	NA	6	True	AATAAA	-16	NA	135178549	135191091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187486_135187611_135188073
ES.27399.26	chr5	+	3912	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	5	2425	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	88.3014093256098	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTTTGATATACTTT	9529	False	NA	15	True	AATAAA	-25	NA	135178549	135191100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183330_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.27	chr5	+	3308	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	52	4128	18	1811	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCTTGTCTGGCTATGT	9542	False	NA	NA	False	NA	NA	NA	135178562	135190486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.28	chr5	+	5385	8	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	18	-1887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	82.2050696088006	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	9542	False	NA	16	True	NA	NA	NA	135178562	135192727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073_135188259_135188422
ES.27399.3	chr5	+	4659	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	-11	2844	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	85.1014100940754	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9508	False	NA	6	True	NA	NA	NA	135178528	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135187789
ES.27399.30	chr5	+	4793	6	ISM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	59	3099	25	2840	intron_retention	FALSE	canonical	3	208	junction_3	15.9122594247329	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGCATGGTGATTCTTT	9549	False	NA	2	True	NA	NA	NA	135178569	135191515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457
ES.27399.31	chr5	+	3133	8	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	27	2844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.2050696088006	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9551	False	NA	6	True	NA	NA	NA	135178571	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073_135190272_135191470
ES.27399.32	chr5	+	5511	6	NNC	ENSMUSG00000005374.14	novel	840	6	NA	NA	27	2844	intron_retention	FALSE	canonical	0	0	junction_5	115.925838362291	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9551	False	NA	6	True	NA	NA	NA	135178571	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183330_135185221_135185374_135186385_135186654_135186859
ES.27399.33	chr5	+	3721	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	29	2418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.2322888741447	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGACCAAGCTTTTGAT	9553	False	NA	8	True	AATAAA	-18	NA	135178573	135191093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178607_135181859_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.34	chr5	+	5671	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	45	-1888	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGACTCCCTGGTGGT	9569	False	NA	15	True	NA	NA	NA	135178589	135192726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.35	chr5	+	4928	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	146	2843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	113.48812957995	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCATGGTGATTCTTTGCT	9670	False	NA	5	True	NA	NA	NA	135178690	135191518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183330_135185221_135185374_135186385_135186654_135186859_135187611_135188073
ES.27399.36	chr5	+	7197	5	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	1286	-1888	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	99.7133391277215	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGACTCCCTGGTGGT	NA	False	NA	15	True	NA	NA	NA	135179830	135192726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135188073
ES.27399.37	chr5	+	6015	2	NNC	ENSMUSG00000005374.14	novel	1368	6	NA	NA	4935	-1887	intron_retention	FALSE	canonical	0	0	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	NA	False	NA	16	True	NA	NA	NA	135186506	135192727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135186654_135186859
ES.27399.38	chr5	+	1736	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	26	-4	26	4	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTCTTTCTACAAAGT	8695	False	NA	33	True	ATTAAA	-28	NA	135197162	135210713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ES.27399.39	chr5	+	579	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	-20	5	-20	-5	multi-exon	FALSE	canonical	3	101	junction_2	118	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCCTAAAGTGTCTAT	8755	False	NA	NA	False	NA	NA	NA	135197222	135202297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135197453_135199940_135200017_135202024
ES.27399.4	chr5	+	5430	6	FSM	ENSMUSG00000005374.14	ENSMUST00000005508.14	1368	6	-10	-4052	-10	-1887	multi-exon	FALSE	canonical	2	7	junction_3	93.5037967143581	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	9509	False	NA	16	True	NA	NA	NA	135178529	135192727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135186385_135186513_135187457_135187611_135188073
ES.27399.40	chr5	+	1651	6	NNC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	-20	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.869550847308	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTAGTACTTGACAGCT	8755	False	NA	19	True	ATTAAA	-14	NA	135197222	135210699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135197442_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ES.27399.41	chr5	+	1561	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	86	111	-20	-87	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAGAAAAGTTTAAG	8755	False	NA	-82	True	ATTAAA	-23	NA	135197222	135210598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ES.27399.42	chr5	+	2009	5	NIC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	4	-11	intron_retention	FALSE	canonical	3	254	junction_4	32.9734741875951	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTAGTACTTGACAGC	8802	False	NA	18	True	ATTAAA	-13	NA	135197269	135210698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135209450_135209691
ES.27399.43	chr5	+	1707	7	NNC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	76	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	116.738192360322	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTAGTACTTGACAGC	8907	False	NA	18	True	ATTAAA	-13	NA	135197374	135210698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135197453_135199940_135200017_135202024_135202223_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ES.27399.44	chr5	+	524	3	NNC	ENSMUSG00000029681.13	novel	1758	6	NA	NA	486	-8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	41	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATCCTAAAGTGTC	9317	False	NA	NA	False	NA	NA	NA	135197784	135202294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135197963_135199940_135200017_135202024
ES.27399.45	chr5	+	1364	1	Intergenic	novelGene_22827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACAGGAGGAAATGC	9329	False	NA	NA	False	NA	NA	NA	135197796	135199160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135197800_135199200
ES.27399.5	chr5	+	4088	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	-4	2414	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTAATGACCAAGCTTT	9515	False	NA	4	True	AATAAA	-14	NA	135178535	135191089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.6	chr5	+	4271	8	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	-3	2842	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.2050696088006	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGCATGGTGATTCTTTGC	9516	False	NA	4	True	NA	NA	NA	135178536	135191517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073_135191061_135191154
ES.27399.7	chr5	+	4440	7	NNC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	-2	2844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.4686427228659	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGTGATTCTTTGCTT	9517	False	NA	6	True	NA	NA	NA	135178537	135191519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181985_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.27399.8	chr5	+	7436	5	NNC	ENSMUSG00000005374.14	novel	840	6	NA	NA	0	2845	intron_retention	FALSE	canonical	0	0	junction_4	102.886770286563	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTGATTCTTTGCTTG	9519	False	NA	7	True	NA	NA	NA	135178539	135191520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135178719_135181788_135181911_135183167_135185374_135186385_135186654_135186859
ES.27399.9	chr5	+	5572	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	1887	0	-1887	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGACTCCCTGGTGGTC	9519	False	NA	16	True	NA	NA	NA	135178539	135192727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ES.274.1	chr1	+	4472	2	Antisense	novelGene_ENSMUSG00000010453.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTATCTCAAGAAAAAAACA	9683	False	NA	NA	False	NA	NA	NA	36394175	36398791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36397306_36397449
ES.274.2	chr1	+	4616	1	Antisense	novelGene_ENSMUSG00000010453.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTATCTCAAGAAAAAAACA	9683	False	NA	NA	False	NA	NA	NA	36394175	36398791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36394200_36398800
ES.2740.1	chr10	+	1108	1	Intergenic	novelGene_2086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	45272331	45273439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45272300_45273400
ES.27400.1	chr5	-	185	1	Intergenic	novelGene_22826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACTTGAT	NA	False	NA	NA	False	NA	NA	NA	135182775	135182590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135182600_135182800
ES.27401.1	chr5	-	2097	1	Antisense	novelGene_ENSMUSG00000029681.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135210506	135208409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135208400_135210500
ES.27402.1	chr5	+	6887	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-389	-6	-389	6	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGATGTTTCCTTTTTT	NA	False	NA	47	True	AATAAA	-33	NA	135215728	135274989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.10	chr5	+	4823	5	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-15	-2756	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	94.3699501960237	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCCTCCAAAATTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	135216102	135237958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135236863_135236924
ES.27402.11	chr5	+	1810	4	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-12	40097	-12	4883	5prime_fragment	FALSE	canonical	3	195	junction_1	15.6914697279198	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGTGTCTTAGTTTG	NA	False	NA	NA	False	ACTAAA	-27	NA	135216105	135234886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843
ES.27402.12	chr5	+	6489	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.8121153755495	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAGCTTTGATGTTT	NA	False	NA	39	True	AATAAA	-42	NA	135216112	135274981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239787_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.13	chr5	+	6360	4	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-5	35540	-5	-1271	intron_retention	FALSE	canonical	3	195	junction_1	15.6914697279198	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTCTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	135216112	135239443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843
ES.27402.15	chr5	+	10347	18	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	180	junction_4	50.2816289964125	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135216113	135274983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.18	chr5	+	10262	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	17	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	81.2863593859525	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGACAGCTTTGATGTT	NA	False	NA	38	True	AATAAA	-41	NA	135216134	135274980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135236863_135236923_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.19	chr5	+	6455	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	79.7216608574893	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135216139	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272671_135272767_135272959
ES.27402.2	chr5	+	6838	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-362	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.2863593859525	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTTTGATGTTTCCTT	NA	False	NA	43	True	AATAAA	-29	NA	135215755	135274985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234028_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.20	chr5	+	6240	5	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	22	-1271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	94.3699501960237	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTCTTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	135216139	135239443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135236863_135236955
ES.27402.23	chr5	+	6648	22	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	26	39777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.97257812156	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAGCACTATGAAAGCAG	NA	False	NA	NA	False	AAAACA	-12	NA	135216143	135314760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225327_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135274988_135287467_135287514_135292120_135292221_135314726
ES.27402.24	chr5	+	5739	20	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	79.4867190425868	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAGCTTTGATGTTT	NA	False	NA	39	True	AATAAA	-42	NA	135216144	135274981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273092_135273815
ES.27402.25	chr5	+	1783	3	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	46	67272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGGACATAAATAA	NA	False	NA	NA	False	NA	NA	NA	135216163	135342255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135226570_135342163
ES.27402.26	chr5	+	4818	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	71	25928	71	2144	5prime_fragment	FALSE	canonical	3	180	junction_5	21.0765799460496	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCTGTTATTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	135216188	135249055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ES.27402.29	chr5	+	6377	21	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	318	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	110.549762550627	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135216435	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135219378_135219480_135224005_135224092_135225303_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.3	chr5	+	4832	4	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-55	37118	-55	-2849	5prime_fragment	FALSE	canonical	3	195	junction_1	15.6914697279198	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCTAATTTCCTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	135216062	135237865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843
ES.27402.30	chr5	+	4777	11	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	319	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	93.1813286018181	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135216436	135274983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135246931_135268926_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.31	chr5	+	6245	20	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	346	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	97.7392936801053	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAGCTTTGATGTTT	NA	False	NA	39	True	AATAAA	-42	NA	135216463	135274981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135219378_135219480_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.32	chr5	+	7363	14	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-371	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	86.2468591315601	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACAGCTTTGATGTTT	4064	False	NA	39	True	AATAAA	-42	NA	135234361	135274981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135238019_135239594_135239793_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.33	chr5	+	7724	16	Fusion	ENSMUSG00000002748.8_ENSMUSG00002075935.1	novel	2423	3	NA	NA	877	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	85.0093851027965	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGACAGCTTTGATGTT	5312	False	NA	38	True	AATAAA	-41	NA	135235609	135274980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135236863_135236957_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.34	chr5	+	9155	15	Fusion	ENSMUSG00000002748.8_ENSMUSG00002075935.1	novel	2423	3	NA	NA	949	2	intron_retention	FALSE	non_canonical	0	0	junction_1	86.3741564240091	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTTTGATGTTTCCTT	5384	False	NA	43	True	AATAAA	-29	NA	135235681	135274985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135236863_135236955_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.36	chr5	+	7661	17	Fusion	ENSMUSG00000002748.8_ENSMUSG00002075935.1	novel	2423	3	NA	NA	1016	-33	multi-exon	FALSE	non_canonical	0	0	junction_1	123.749352902349	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACATTATGTACTTG	5451	False	NA	8	True	AATAAA	-11	NA	135235748	135274950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135236863_135236953_135238019_135239594_135239793_135243217_135243320_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.37	chr5	+	5746	15	Fusion	ENSMUSG00000002748.8_ENSMUSG00002075935.1	novel	2423	3	NA	NA	-956	0	multi-exon	FALSE	non_canonical	0	0	junction_1	110.65823465951	523	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	5588	False	NA	41	True	AATAAA	-44	NA	135235885	135274983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135236863_135236957_135238019_135239594_135239793_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.38	chr5	+	6590	16	Fusion	ENSMUSG00000002748.8_ENSMUSG00002075935.1	novel	2423	3	NA	NA	-95	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	85.0093851027965	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGACAGCTTTGATGT	6449	False	NA	37	True	AATAAA	-40	NA	135236746	135274979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_135236863_135236953_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.39	chr5	+	6055	14	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	21449	3	305	-3	intron_retention	FALSE	canonical	3	180	junction_1	42.7199494714148	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGACAGCTTTGATGTT	7269	False	NA	38	True	AATAAA	-41	NA	135237566	135274980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662
ES.27402.4	chr5	+	4273	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-37	26581	-37	1491	5prime_fragment	FALSE	canonical	3	180	junction_5	21.0765799460496	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATGTTGTATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	135216080	135248402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443
ES.27402.40	chr5	+	5413	14	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	23474	3	2330	-3	3prime_fragment	FALSE	canonical	3	241	junction_1	28.2901283303336	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGACAGCTTTGATGTT	9294	False	NA	38	True	AATAAA	-41	NA	135239591	135274980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.41	chr5	+	2981	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29655	13578	8511	-11631	internal_fragment	FALSE	canonical	3	263	junction_1	19.3455421221531	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGACCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	135245772	135261405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453
ES.27402.42	chr5	+	3843	13	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	9521	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.0912063873621	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGTACTTGTGTTTAT	NA	False	NA	15	True	AATAAA	-18	NA	135246782	135274957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266914_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.43	chr5	+	3704	13	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	9688	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.0378742758134	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGACAGCTTTGATGT	NA	False	NA	37	True	AATAAA	-40	NA	135246949	135274979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135247149_135250811_135250951_135251938_135252077_135255368_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.44	chr5	+	4582	12	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	33616	6	12472	-6	3prime_fragment	FALSE	canonical	3	293	junction_1	16.3823125745194	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135249733	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.45	chr5	+	3367	11	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	35819	6	14675	-6	3prime_fragment	FALSE	canonical	3	298	junction_2	15.179262169157	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135251936	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.46	chr5	+	3031	8	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	42891	6	-12234	-6	3prime_fragment	FALSE	canonical	3	301	junction_5	15.7181813353134	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135259008	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.47	chr5	+	2852	7	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	44335	6	-10790	-6	3prime_fragment	FALSE	canonical	3	301	junction_4	16.3605215890774	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135260452	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.48	chr5	+	5137	1	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-1402	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGAGACAGCTTTGAT	NA	False	NA	35	True	AATAAA	-38	NA	135269840	135274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135269800_135275000
ES.27402.49	chr5	+	176	1	Intergenic	novelGene_22834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135306319	135306495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135306300_135306500
ES.27402.5	chr5	+	5759	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-37	-752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.2863593859525	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCATCTTGCTTTGG	NA	False	NA	NA	False	TATAAA	-16	NA	135216080	135274231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234028_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.50	chr5	+	2546	1	Intergenic	novelGene_22838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATATGCCCCACCCTTA	NA	False	NA	NA	False	NA	NA	NA	135326888	135329434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135326900_135329400
ES.27402.51	chr5	+	213	1	Intergenic	novelGene_22841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGTGACATTCCATT	NA	False	NA	NA	False	NA	NA	NA	135336091	135336304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135336100_135336300
ES.27402.6	chr5	+	9628	18	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-37	-752	intron_retention	FALSE	canonical	3	180	junction_4	50.2816289964125	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTCATCTTGCTTTGG	NA	False	NA	NA	False	TATAAA	-16	NA	135216080	135274231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.7	chr5	+	5759	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	-17	750	-17	-750	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCATCTTGCTTTGGCA	NA	False	NA	NA	False	TATAAA	-18	NA	135216100	135274233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.8	chr5	+	4804	18	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	80.8633346624634	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTTTGATGTTTCCTT	NA	False	NA	43	True	AATAAA	-29	NA	135216102	135274985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27402.9	chr5	+	10265	19	NNC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	81.2863593859525	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135216102	135274983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135236863_135236955_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ES.27403.1	chr5	+	201	1	Intergenic	novelGene_22842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATGATTAAAACTCATA	NA	False	NA	NA	False	NA	NA	NA	135350853	135351054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135350900_135351100
ES.27404.1	chr5	-	2534	1	Intergenic	novelGene_22828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATATTGTTTATATGTA	NA	False	NA	NA	False	NA	NA	NA	135215920	135213386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135213400_135215900
ES.27405.1	chr5	-	6962	1	Intergenic	novelGene_22829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGGAAAAATGAAACTTCT	NA	False	NA	NA	False	NA	NA	NA	135224258	135217296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135217300_135224300
ES.27406.1	chr5	-	620	1	Intergenic	novelGene_22830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAGAAGAAAACAAACTA	NA	False	NA	NA	False	NA	NA	NA	135226700	135226080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135226100_135226700
ES.27407.1	chr5	-	177	1	Intergenic	novelGene_22831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	135232246	135232069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135232100_135232200
ES.27408.1	chr5	-	1756	12	Antisense	novelGene_ENSMUSG00000002748.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGTTGTATGGAGCACA	NA	False	NA	NA	False	NA	NA	NA	135273196	135250780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135250949_135251936_135252073_135255363_135255466_135257379_135257478_135259008_135259188_135260452_135260640_135265130_135265275_135266770_135266918_135268877_135269000_135271265_135271394_135272658_135272765_135272957
ES.27408.2	chr5	-	179	1	Intergenic	novelGene_22832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	135258543	135258364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135258400_135258500
ES.27408.3	chr5	-	4948	1	Antisense	novelGene_ENSMUSG00000002748.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAAGACTAGACAGAACA	NA	False	NA	NA	False	NA	NA	NA	135277392	135272444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135272400_135277400
ES.27408.4	chr5	-	3574	1	Antisense	novelGene_ENSMUSG00000002748.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCTCTTTTTCTGGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	135277712	135274138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135274100_135277700
ES.27409.1	chr5	-	2339	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	-41	-5	-41	5	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTATCTGGGCTGGA	NA	False	NA	3	True	AATAAA	-18	NA	135280125	135277786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135277800_135280100
ES.2741.1	chr10	+	1531	1	Intergenic	novelGene_2087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	45275722	45277253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45275700_45277300
ES.27410.1	chr5	-	164	1	Intergenic	novelGene_22833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATTAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135280765	135280601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135280600_135280800
ES.27411.1	chr5	-	182	1	Intergenic	novelGene_22835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAACTTAAATGAA	NA	False	NA	NA	False	NA	NA	NA	135311354	135311172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135311200_135311400
ES.27411.11	chr5	-	1526	10	NNC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	424.675329872679	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135378889	135320561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320966_135339297_135339390_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.12	chr5	-	1420	9	NIC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	-30	-4	combination_of_known_junctions	FALSE	canonical	3	59	junction_8	311.352668809824	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135378759	135320561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378672
ES.27411.13	chr5	-	1126	7	NIC	ENSMUSG00000040013.12	novel	1297	8	NA	NA	-59	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	445.517208795949	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135378788	135320561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135376730_135376821_135378471_135378590_135378672
ES.27411.14	chr5	-	1398	9	NNC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	341.406649027227	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGTATGCAGTACAATT	NA	False	NA	-6	True	AATAAA	-15	NA	135378857	135320562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320958_135366463_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.15	chr5	-	5438	1	Intergenic	novelGene_22837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATTGTTTAATTTAT	NA	False	NA	NA	False	AGTAAA	-17	NA	135331721	135326283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135326300_135331700
ES.27411.16	chr5	-	190	1	Intergenic	novelGene_22839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTTTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	135333032	135332842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135332800_135333000
ES.27411.17	chr5	-	4428	1	Intergenic	novelGene_22840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGGTGAATTGAGCCTG	9706	False	NA	NA	False	TTTAAA	-40	NA	135340339	135335911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135335900_135340300
ES.27411.18	chr5	-	4481	9	NNC	ENSMUSG00000040013.12	novel	1287	8	NA	NA	6	-15354	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	340.429668764343	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGGTGAATTGAGCCTG	NA	False	NA	NA	False	TTTAAA	-40	NA	135378862	135335911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135339390_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.19	chr5	-	4687	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	15	-3415	-14	3415	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATTTTATTAATTTGG	NA	False	NA	NA	False	AATATA	-27	NA	135378882	135362804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.2	chr5	-	177	2	Intergenic	novelGene_22836	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	264	junction_1	0	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	135333032	135311176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135311303_135332981
ES.27411.20	chr5	-	4229	7	ISM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	-8	42579	-8	3083	5prime_fragment	FALSE	canonical	3	68	junction_3	365.317061681433	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTATATGATACCACCTG	NA	False	NA	NA	False	NA	NA	NA	135378876	135363136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.21	chr5	-	4288	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	80	-3081	51	3081	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTTATATGATACCACC	NA	False	NA	NA	False	NA	NA	NA	135378817	135363138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.22	chr5	-	10596	6	NIC	ENSMUSG00000040013.12	novel	1287	8	NA	NA	11	3047	intron_retention	FALSE	canonical	3	982	junction_2	48.6974331972436	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135378857	135363172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135368442_135368775_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.23	chr5	-	2710	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	15	-1438	-14	1438	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGGCTTACAGTTTG	NA	False	NA	NA	False	NA	NA	NA	135378882	135364781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.24	chr5	-	1287	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	-2	2	-1	-2	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAGTCATTAGTGTGA	NA	False	NA	-5	True	ATTAAA	-22	NA	135378899	135366221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.25	chr5	-	5976	8	NNC	ENSMUSG00000040013.12	novel	1287	8	NA	NA	-1752	-4	intron_retention	FALSE	canonical	3	16	junction_7	358.279163758756	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAAGTCATTAGTGT	NA	False	NA	-7	True	ATTAAA	-20	NA	135380650	135366223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135366562_135368331_135368442_135368775_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788_135378911_135380502
ES.27411.4	chr5	-	7042	1	NIC	ENSMUSG00000040013.12	novel	1297	8	NA	NA	51130	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135327599	135320557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135320600_135327600
ES.27411.5	chr5	-	4798	2	NNC	ENSMUSG00000040013.12	novel	1297	8	NA	NA	49931	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135328798	135320557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320966_135324408
ES.27411.6	chr5	-	1459	9	NNC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	-1725	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	423.129837490811	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGCAGTACAATTCATT	NA	False	NA	-2	True	AATAAA	-19	NA	135380623	135320558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788_135378911_135380502
ES.27411.8	chr5	-	1501	10	NNC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	424.677422969772	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135378889	135320561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320966_135324408_135324476_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ES.27411.9	chr5	-	1557	10	NNC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	-1706	-4	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	318.477667492335	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCAGTACAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	135380604	135320561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788_135378911_135380502
ES.27412.1	chr5	+	4426	6	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1398	-26	intron_retention	FALSE	canonical	3	14	junction_2	3.07245829914744	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	135380750	135396833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392903_135395520_135395927
ES.27412.2	chr5	+	1938	7	NNC	ENSMUSG00000053388.11	novel	1803	6	NA	NA	-1394	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.25718035235908	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATATCTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	135380754	135396820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135380916_135382136_135382549_135387708_135387805_135392581_135392813_135392906_135392927_135395394_135395520_135395927
ES.27412.3	chr5	+	2719	3	NNC	ENSMUSG00000053388.11	novel	1456	6	NA	NA	-1385	-6645	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	4	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACATTTACCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	135380763	135389863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135380916_135382136_135382549_135387708
ES.27413.1	chr5	-	5268	4	Antisense	novelGene_ENSMUSG00000053388.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAACAAGCAAAC	116	False	NA	NA	False	AAGAAA	-6	NA	135394412	135384093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135386504_135386686_135387805_135392581_135392812_135392902
ES.27413.2	chr5	-	169	1	Intergenic	novelGene_22843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGAAGCCAGCAAGTC	7846	False	NA	NA	False	NA	NA	NA	135386682	135386513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135386500_135386700
ES.27414.1	chr5	+	1846	8	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	-4	647	-4	8	intron_retention	FALSE	canonical	3	265	junction_6	14.0349418180744	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTTTTATTTTTAATGA	NA	False	NA	26	True	AATAAA	-26	NA	135398802	135405005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128
ES.27414.10	chr5	+	1691	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	113.163421652051	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGATCACAGTTTTA	NA	False	NA	16	True	AATAAA	-16	NA	135398824	135404995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.11	chr5	+	2535	8	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	4	junction_5	101.592623868516	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGATCACAGTTTTA	NA	False	NA	16	True	AATAAA	-16	NA	135398826	135404995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135400461_135402807_135402947_135403037_135403154_135403780_135403920_135404128_135404340_135404408_135404553_135404729
ES.27414.12	chr5	+	1752	8	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	7	junction_1	125.729219892171	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398828	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399021_135399168_135400094_135400270_135400351_135400461_135402889_135402947_135403037_135403154_135403780_135403960_135404128
ES.27414.13	chr5	+	1676	8	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	4	-2	intron_retention	FALSE	canonical	1	4	junction_7	138.562739050082	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGATCACAGTTTTA	NA	False	NA	16	True	AATAAA	-16	NA	135398832	135404995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402889_135402947_135403037_135403154_135403780_135403920_135404128
ES.27414.14	chr5	+	1440	9	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	96.6448879920713	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGACAGATCACAGTTT	NA	False	NA	14	True	AATAAA	-14	NA	135398834	135404993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.15	chr5	+	3334	9	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_2	139.157228971405	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAATATTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	135398834	135405659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135400461_135400631_135400727_135402807_135403154_135403780_135403960_135404128_135404175_135404257_135404340_135404408_135404553_135404729
ES.27414.16	chr5	+	1635	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.805763569097	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATCACAGTTTTATTT	NA	False	NA	19	True	AATAAA	-19	NA	135398842	135404998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135400631_135400727_135402807_135402947_135403042_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.17	chr5	+	1510	10	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	91.3188688194786	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398843	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403920_135404128_135404340_135404408_135404553_135404729
ES.27414.18	chr5	+	2113	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	118.758495472592	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTTAAATATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	135398843	135405653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402893_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.19	chr5	+	1519	10	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	18	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	87.7620239027461	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATGACAGATCACAGTT	NA	False	NA	13	True	AATAAA	-13	NA	135398862	135404992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400359_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.2	chr5	+	2369	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	113.163421652051	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTTAAATATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	135398804	135405653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.20	chr5	+	1531	9	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	170	656	132	-1	3prime_fragment	FALSE	canonical	3	253	junction_8	23.4840371316348	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398976	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.21	chr5	+	3340	6	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	1714	659	608	-4	3prime_fragment	FALSE	canonical	3	253	junction_5	28.0813105107294	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGACAGATCACAGTTT	NA	False	NA	14	True	AATAAA	-14	NA	135400520	135404993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.22	chr5	+	4117	4	NNC	ENSMUSG00000000916.16	novel	1991	6	NA	NA	696	1	intron_retention	TRUE	non_canonical	0	0	junction_1	136.193489810147	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTTAAATATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	135400608	135405653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135401435_135401644_135402947_135403037_135403154_135403780
ES.27414.23	chr5	+	2939	3	NIC	ENSMUSG00000000916.16	novel	952	4	NA	NA	-1242	-1	intron_retention	FALSE	canonical	3	253	junction_2	6	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135401253	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135403154_135403780_135404553_135404729
ES.27414.24	chr5	+	1990	5	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-553	-1	intron_retention	FALSE	canonical	3	253	junction_4	20.7168409753997	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135401942	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135402947_135403037_135403154_135403780_135403960_135404128_135404553_135404729
ES.27414.3	chr5	+	3430	7	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-2	5	intron_retention	FALSE	canonical	3	265	junction_5	14.4846662217517	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTTTTCTTTTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	135398804	135405664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128
ES.27414.4	chr5	+	1592	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	2	649	2	6	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGTTTTATTTTTAAT	NA	False	NA	24	True	AATAAA	-24	NA	135398808	135405003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.5	chr5	+	2240	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	4	-1	4	1	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTTAAATATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	135398810	135405653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27414.6	chr5	+	1566	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	118.406497986521	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398810	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399021_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403920_135404128_135404340_135404408_135404553_135404729
ES.27414.7	chr5	+	2309	9	NIC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	253	junction_8	16.6282891483159	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTTTAAATATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	135398810	135405653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404553_135404729
ES.27414.8	chr5	+	1451	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	118.759742940147	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398820	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402889_135402947_135403037_135403154_135403780_135403920_135404128_135404340_135404408_135404553_135404729
ES.27414.9	chr5	+	1486	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	116.884664055461	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACAGATCACAGTTTTAT	NA	False	NA	17	True	AATAAA	-17	NA	135398820	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402889_135402947_135403042_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ES.27415.1	chr5	+	3724	10	Antisense	novelGene_ENSMUSG00000099212.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	6220	False	NA	NA	False	NA	NA	NA	135411152	135423669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413023_135413708_135413799_135415677_135415849_135417489_135417574_135420477_135420633_135421161
ES.27415.2	chr5	+	2315	11	Antisense	novelGene_ENSMUSG00000099212.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	6221	False	NA	NA	False	NA	NA	NA	135411153	135423667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135411392_135411923_135412099_135412480_135412584_135412692_135412818_135412946_135413023_135413708_135413799_135415677_135415855_135417494_135417574_135420476_135420633_135421161_135421382_135422791
ES.27416.1	chr5	-	3111	4	Antisense	novelGene_ENSMUSG00000000916.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCAGGCTATTTTGTAGT	2301	False	NA	NA	False	NA	NA	NA	135402547	135398328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_135399375_135399705_135399877_135400443_135401430_135401639
ES.27416.2	chr5	-	174	1	Intergenic	novelGene_22844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3216	False	NA	NA	False	NA	NA	NA	135401632	135401458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135401500_135401600
ES.27417.1	chr5	-	5611	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	-30	-1	-30	1	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTTTGCCCTTTATTT	NA	False	NA	-4	True	AATAAA	-19	NA	135423430	135404993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.11	chr5	-	5178	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-10328	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	57.0109029533435	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGAGTTTGCCCTTT	1413	False	NA	-8	True	AATAAA	-15	NA	135433728	135404997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135433517
ES.27417.12	chr5	-	5723	14	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.4414228658478	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTGAGTTTGCCCTT	NA	False	NA	-9	True	AATAAA	-14	NA	135423419	135404998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135408830_135408959_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.13	chr5	-	5082	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-10243	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.1282772264616	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTGAGTTTGCCCTT	1498	False	NA	-9	True	AATAAA	-14	NA	135433643	135404998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135433527
ES.27417.14	chr5	-	5359	12	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	41	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	62.2682811949648	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGATGTGAGTTTGCCC	NA	False	NA	-11	True	AATAAA	-12	NA	135423359	135405000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135407029_135407488_135407612_135409773_135411391_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.15	chr5	-	4177	7	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	10404	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.4440558000135	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGATGTGAGTTTGCCC	NA	False	NA	-11	True	AATAAA	-12	NA	135412996	135405000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412056_135412480_135412584_135412692_135412818_135412946
ES.27417.17	chr5	-	5124	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	28	428	28	-428	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTCCCTGGTCCCCTT	NA	False	NA	NA	False	TATAAA	-11	NA	135423372	135405422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.18	chr5	-	4958	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	-2	624	-2	-624	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTTTAAAATTCCTTCA	NA	False	NA	3	True	AATAAA	-25	NA	135423402	135405618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.19	chr5	-	4507	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-10281	-627	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	57.0109029533435	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCCTTTAAAATTCCT	1460	False	NA	0	True	AATAAA	-22	NA	135433681	135405621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135433517
ES.27417.21	chr5	-	4739	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	41	800	41	-800	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCTACCTAGCCTGTCT	NA	False	NA	NA	False	AATATA	-23	NA	135423359	135405794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.22	chr5	-	4026	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	41	1513	41	-1513	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTCAGGGTCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	135423359	135406507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.23	chr5	-	3853	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	33	1694	33	-1694	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGCTGCCCCAGCGC	NA	False	NA	NA	False	AAAACA	-14	NA	135423367	135406688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.24	chr5	-	2005	11	ISM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	41	6156	41	-6156	5prime_fragment	FALSE	canonical	3	173	junction_4	20.9334660293034	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCCCAAAGCCCAGCATG	NA	False	NA	NA	False	NA	NA	NA	135423359	135411150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.25	chr5	-	575	1	Intergenic	novelGene_22845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTATT	3843	False	NA	NA	False	NA	NA	NA	135431298	135430723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135430700_135431300
ES.27417.4	chr5	-	5504	12	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	61.8376974542736	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTTTGCCCTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	135423406	135404995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135420475_135420635_135421163_135421380_135422790
ES.27417.6	chr5	-	5959	12	NIC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	173	junction_5	21.0928682475639	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGAGTTTGCCCTTTA	NA	False	NA	-7	True	AATAAA	-16	NA	135423399	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27417.8	chr5	-	5559	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	60.1248700622297	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGAGTTTGCCCTTTA	NA	False	NA	-7	True	AATAAA	-16	NA	135423392	135404996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420486_135420635_135421163_135421380_135422790
ES.27417.9	chr5	-	5557	13	NNC	ENSMUSG00000053293.10	novel	5580	13	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.1305870585013	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGAGTTTGCCCTTT	NA	False	NA	-8	True	AATAAA	-15	NA	135423393	135404997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412571_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ES.27418.1	chr5	+	3119	3	Antisense	novelGene_ENSMUSG00000039959.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGGGGTGTCGGCTTG	NA	False	NA	NA	False	NA	NA	NA	135433809	135440047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135433834_135435235_135437929_135439645
ES.27418.2	chr5	+	2543	3	Antisense	novelGene_ENSMUSG00000039959.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATTTATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	135437015	135444478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135437929_135440868_135440955_135442934
ES.27419.1	chr5	+	182	1	Intergenic	novelGene_22850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAATACGTAAACA	NA	False	NA	NA	False	NA	NA	NA	135532529	135532711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135532500_135532700
ES.2742.1	chr10	-	6108	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	18	657	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTGGCTTTATTATTT	NA	False	NA	NA	False	ATTAAA	-23	NA	45362473	45252058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.10	chr10	-	6023	8	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-54	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6235628493103	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTTGGAGATATTTT	NA	False	NA	-11	True	AATAAA	-22	NA	45362545	45252726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45260468_45260690_45295232_45295305_45296619_45296805_45345132_45345315_45346146_45346437_45352443_45352493_45362322
ES.2742.11	chr10	-	5730	7	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	16	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	25.2372079808101	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGGTTTGGAGATATT	NA	False	NA	-13	True	AATAAA	-20	NA	45362475	45252728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146_45346437_45352443_45352493_45362322
ES.2742.12	chr10	-	5706	7	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-25	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4526897771644	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGGTTTGGAGATATT	NA	False	NA	-13	True	AATAAA	-20	NA	45362516	45252728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45260468_45260690_45295228_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.14	chr10	-	5900	8	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-34	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.4999104903714	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGGTTTGGAGATATT	NA	False	NA	-13	True	AATAAA	-20	NA	45362525	45252728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45345515_45345672_45346146_45346401_45352443_45352493_45362322
ES.2742.15	chr10	-	3507	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-92	-2054	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATACTTGTTAGTAACT	NA	False	NA	NA	False	AATAAA	-19	NA	45362583	45254769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.16	chr10	-	2886	6	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-84	-2532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.0362719323504	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATCCAAGTATAATGAG	NA	False	NA	NA	False	TTTAAA	-19	NA	45346381	45255247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257167_45257234_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
ES.2742.17	chr10	-	1755	5	FSM	ENSMUSG00000063804.9	ENSMUST00000079390.7	5402	5	-20	3667	-20	-3667	multi-exon	FALSE	canonical	3	19	junction_4	19.8368344248774	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCAGTGTCTTTTATTCT	NA	False	NA	NA	False	AATGAA	-21	NA	45346317	45256382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
ES.2742.18	chr10	-	1854	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-54	-3669	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCAGTGTCTTTTATT	NA	False	NA	NA	False	AATGAA	-19	NA	45362545	45256384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.19	chr10	-	229	1	Intergenic	novelGene_2085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGACCTGTCATCCTGTC	NA	False	NA	NA	False	NA	NA	NA	45270406	45270177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45270200_45270400
ES.2742.2	chr10	-	6117	5	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	569	653	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	26.4102252924885	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATGATTGGCTTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	45345728	45252062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45345515
ES.2742.20	chr10	-	5069	1	Intergenic	novelGene_2088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTTGGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	45327056	45321987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45322000_45327100
ES.2742.21	chr10	-	3052	5	NNC	ENSMUSG00000063804.9	novel	2902	4	NA	NA	-30	11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	22.8951414059839	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGATCTGGGGTAAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	45362521	45332667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45335000_45345132_45345315_45346146_45346437_45352443_45352493_45362322
ES.2742.23	chr10	-	2783	4	NIC	ENSMUSG00000063804.9	novel	2902	4	NA	NA	-58	4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	24.5130350811336	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTGGATCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	45362549	45332674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45335000_45345132_45345315_45352443_45352493_45362322
ES.2742.24	chr10	-	2203	4	NNC	ENSMUSG00000063804.9	novel	2902	4	NA	NA	-33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7556757682529	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTGGATCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	45362524	45332674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45334445_45345132_45345315_45352443_45352493_45362322
ES.2742.25	chr10	-	3114	5	NNC	ENSMUSG00000063804.9	novel	2902	4	NA	NA	-136	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	20.9568008054665	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATCTTGGATCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	45362627	45332675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45335000_45345132_45345315_45346146_45346401_45352443_45352493_45362322
ES.2742.26	chr10	-	4470	1	Genic_Genomic	ENSMUSG00000063804.9	novel	NA	NA	NA	NA	-54	-25397	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATCTGTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	45362545	45358075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_45358100_45362500
ES.2742.3	chr10	-	6138	5	FSM	ENSMUSG00000063804.9	ENSMUST00000079390.7	5402	5	-84	-652	-84	652	multi-exon	FALSE	canonical	3	19	junction_4	19.8368344248774	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGATTGGCTTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	45346381	45252063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
ES.2742.4	chr10	-	5725	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-188	68	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTGGTTTGGTTTGTT	NA	False	NA	68	True	AGTAAA	-23	NA	45362679	45252647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.5	chr10	-	1699	7	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-33	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6320168885819	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTTTGGTTTGGTTTG	NA	False	NA	66	True	AGTAAA	-21	NA	45362524	45252649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45253418_45257286_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.7	chr10	-	5853	7	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-71	59	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	22.5641062062934	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGAGGCTTTTTGGTT	NA	False	NA	59	True	AGTAAA	-14	NA	45362562	45252656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146_45346401_45352443_45352493_45362322
ES.2742.8	chr10	-	3324	7	NNC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-16	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.6320168885819	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTTTCAGAGGCTTTT	NA	False	NA	54	True	AGTAAA	-9	NA	45362507	45252661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_45255150_45257364_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
ES.2742.9	chr10	-	5442	5	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	-33	-11	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	27.2442654516506	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTTGGAGATATTTT	NA	False	NA	-11	True	AATAAA	-22	NA	45362524	45252726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45362322
ES.27420.1	chr5	-	501	1	Intergenic	novelGene_22846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAACTCTACT	784	False	NA	NA	False	NA	NA	NA	135434357	135433856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135433900_135434400
ES.27420.2	chr5	-	332	1	Intergenic	novelGene_22847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGTTTAATTTGGTTC	784	False	NA	NA	False	NA	NA	NA	135434357	135434025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135434000_135434400
ES.27420.3	chr5	-	155	1	Intergenic	novelGene_22848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	785	False	NA	NA	False	NA	NA	NA	135434356	135434201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135434200_135434400
ES.27421.1	chr5	-	8025	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-178	13	intron_retention	TRUE	canonical	2	76	junction_15	42.4266818562722	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGATCAGAGTGCTCTT	9432	False	NA	15	True	AATAAA	-37	NA	135518290	135435371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.11	chr5	-	7486	29	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	73	-5	intron_retention	FALSE	canonical	0	0	junction_7	57.0159640193975	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGAACTCTGGTGATA	2276	False	NA	-7	True	AATAAA	-15	NA	135486986	135435393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453729_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953
ES.27421.15	chr5	-	7682	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	60.5569193294049	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGAACTCTGGTGA	9629	False	NA	-9	True	AATAAA	-13	NA	135518093	135435395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469372_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.16	chr5	-	7519	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	56.8896919023566	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGAACTCTGGTGA	NA	False	NA	-9	True	AATAAA	-13	NA	135573955	135435395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ES.27421.17	chr5	-	6483	20	NNC	ENSMUSG00000039959.14	novel	6224	19	NA	NA	-188	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	74.216237182276	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGCTGTGGAGAACTC	9422	False	NA	-15	True	AATAAA	-7	NA	135518300	135435401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464032_135518057
ES.27421.18	chr5	-	5457	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	29	-2029	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAGTGTTAGTGGCATG	9639	False	NA	NA	False	NA	NA	NA	135518083	135437417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.2	chr5	-	7727	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-195	13	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGATCAGAGTGCTCTT	9415	False	NA	15	True	AATAAA	-37	NA	135518307	135435371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.20	chr5	-	5391	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2352	intron_retention	FALSE	canonical	2	76	junction_15	44.061119166701	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGATTTATATAACTGG	9611	False	NA	-2	True	ATTAAA	-22	NA	135518111	135437740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.21	chr5	-	5170	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-2	-2353	combination_of_known_junctions	FALSE	canonical	1	3	junction_31	60.1331855134916	503	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGATTTATATAACTG	NA	False	NA	-3	True	ATTAAA	-21	NA	135573976	135437741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ES.27421.22	chr5	-	5352	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-195	-2358	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTATAGAGATTTATAT	9415	False	NA	-8	True	ATTAAA	-16	NA	135518307	135437746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.26	chr5	-	5497	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-15	-2372	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTATATATGTTTGTGT	9595	False	NA	-22	True	ATTAAA	-2	NA	135518127	135437760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.28	chr5	-	5464	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-2	-2378	intron_retention	FALSE	canonical	0	0	junction_29	69.5988186362064	503	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACAGGTTATATATGT	NA	False	NA	-28	True	NA	NA	NA	135573976	135437766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487077_135489260_135489325_135573790
ES.27421.29	chr5	-	5068	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	39	-2400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	60.5013222136027	478	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9649	False	NA	-50	True	NA	NA	NA	135518073	135437788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449178_135450976_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.3	chr5	-	5951	13	NNC	ENSMUSG00000039959.14	novel	6224	19	NA	NA	-171	6	intron_retention	FALSE	canonical	0	0	junction_1	76.6975933998801	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAAGGGCTGATCAGAG	6808	False	NA	8	True	AATAAA	-30	NA	135459119	135435378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440157_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044
ES.27421.30	chr5	-	5445	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-15	-2400	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9595	False	NA	-50	True	NA	NA	NA	135518127	135437788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.31	chr5	-	5109	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-5	-2400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	82.4703144018757	478	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9605	False	NA	-50	True	NA	NA	NA	135518117	135437788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453773_135455174_135455286_135457353_135457491_135457570_135457672_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487098_135489260_135489325_135517934
ES.27421.33	chr5	-	5667	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2400	intron_retention	FALSE	canonical	1	1	junction_30	69.471739438747	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9611	False	NA	-50	True	NA	NA	NA	135518111	135437788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135511989_135512204_135517934
ES.27421.34	chr5	-	5316	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-177	-2400	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	9433	False	NA	-50	True	NA	NA	NA	135518289	135437788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.35	chr5	-	5476	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-204	-2558	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGAAGGGTCCCTACCT	9406	False	NA	78	True	NA	NA	NA	135518316	135437946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.36	chr5	-	5159	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-204	-2560	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACAGAAGGGTCCCTAC	9406	False	NA	76	True	NA	NA	NA	135518316	135437948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.37	chr5	-	5467	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-204	-2591	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAAAGCCCCAGCTCG	9406	False	NA	45	True	AATAAA	-20	NA	135518316	135437979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.38	chr5	-	5388	19	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1771	-2596	intron_retention	FALSE	canonical	3	76	junction_14	51.3969363068305	476	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACAGTGAAAAGCCCCA	NA	False	NA	40	True	AATAAA	-15	NA	135467407	135437984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388
ES.27421.39	chr5	-	5427	30	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	17	-2639	intron_retention	FALSE	canonical	2	120	junction_14	37.2768030759402	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	9627	False	NA	-3	True	AATAAA	-20	NA	135518095	135438027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.41	chr5	-	5113	33	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2639	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	69.1699672907252	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	9611	False	NA	-3	True	AATAAA	-20	NA	135518111	135438027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135511989_135512204_135517934
ES.27421.42	chr5	-	3200	15	NIC	ENSMUSG00000039959.14	novel	6224	19	NA	NA	-1736	-2639	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	74.2463151013062	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	5243	False	NA	-3	True	AATAAA	-20	NA	135460684	135438027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460499
ES.27421.43	chr5	-	4965	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2639	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	60.7845686644326	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACTATCATTTTTAAAAA	9611	False	NA	-3	True	AATAAA	-20	NA	135518111	135438027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463770_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.45	chr5	-	5303	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-407	-2643	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCACTATCATTTTTA	9203	False	NA	-7	True	AATAAA	-16	NA	135518519	135438031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.47	chr5	-	5382	30	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	31	-2646	intron_retention	FALSE	canonical	2	76	junction_14	42.7293002920511	475	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGCCACTATCATTT	9641	False	NA	-10	True	AATAAA	-13	NA	135518081	135438034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.48	chr5	-	5073	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-3423	-2646	intron_retention	FALSE	canonical	0	0	junction_13	70.6203385875643	475	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGCCACTATCATTT	6187	False	NA	-10	True	AATAAA	-13	NA	135521535	135438034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460133_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135521496
ES.27421.5	chr5	-	7738	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTGATAAAGGGCTGA	9415	False	NA	2	True	AATAAA	-24	NA	135518307	135435384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.51	chr5	-	4442	27	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	1	-2646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	62.0957577946728	475	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGCCACTATCATTT	9611	False	NA	-10	True	AATAAA	-13	NA	135518111	135438034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135478541_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.52	chr5	-	4558	14	NIC	ENSMUSG00000039959.14	novel	6224	19	NA	NA	-1343	-2647	intron_retention	FALSE	canonical	3	167	junction_1	33.3693690815306	470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAAGCCACTATCATT	5636	False	NA	-11	True	AATAAA	-12	NA	135460291	135438035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137
ES.27421.55	chr5	-	5015	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-14	-2829	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	471	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGATGAGTGGCATTGTT	9596	False	NA	NA	False	NA	NA	NA	135518126	135438217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.56	chr5	-	4583	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-179	-3425	intron_retention	FALSE	non_canonical	0	0	junction_29	59.4147475145878	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATCAATCTCCACAGATC	9431	False	NA	NA	False	ACTAAA	-15	NA	135518291	135438813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489261_135489325_135517934
ES.27421.57	chr5	-	4044	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-15	-3486	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCCCAGAGATGCTTG	9595	False	NA	NA	False	NA	NA	NA	135518127	135438874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.59	chr5	-	4482	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-179	-3527	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCTTTATATTTAT	9431	False	NA	94	True	NA	NA	NA	135518291	135438915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.6	chr5	-	7556	29	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-9	2	intron_retention	FALSE	canonical	0	0	junction_13	76.3273278019593	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGTGATAAAGGGCT	9601	False	NA	0	True	AATAAA	-22	NA	135518121	135435386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460133_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.60	chr5	-	4207	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-209	-3541	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTGGCTCGGTTTAAGA	9401	False	NA	80	True	NA	NA	NA	135518321	135438929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.61	chr5	-	4514	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-202	-3542	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTTGGCTCGGTTTAAG	9408	False	NA	79	True	NA	NA	NA	135518314	135438930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.62	chr5	-	4132	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-204	-3587	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCCGTGTGCTACTTAC	9406	False	NA	34	True	NA	NA	NA	135518316	135438975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.64	chr5	-	3915	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	3	-3598	combination_of_known_junctions	FALSE	canonical	1	3	junction_31	60.1331855134916	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAAGCAATGGTTCCGT	NA	False	NA	23	True	NA	NA	NA	135573966	135438986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ES.27421.66	chr5	-	4371	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	22	-3622	intron_retention	FALSE	canonical	0	0	junction_26	72.3109253651148	461	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9632	False	NA	-1	True	TATAAA	-28	NA	135518090	135439010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481176_135481362_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.67	chr5	-	3645	30	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	41	-3622	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	61.3180825961634	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9651	False	NA	-1	True	TATAAA	-28	NA	135518071	135439010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135517934
ES.27421.68	chr5	-	3987	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-4	-3622	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	60.7845686644326	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9606	False	NA	-1	True	TATAAA	-28	NA	135518116	135439010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463770_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.7	chr5	-	4542	7	NNC	ENSMUSG00000039959.14	novel	6224	19	NA	NA	7872	1	intron_retention	FALSE	non_canonical	0	0	junction_1	103.641074011331	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGTGATAAAGGGC	9372	False	NA	-1	True	AATAAA	-21	NA	135451076	135435387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135435830_135436526_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974
ES.27421.73	chr5	-	4254	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-20	-3626	intron_retention	FALSE	canonical	1	3	junction_30	56.5411944220023	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCCTGCTTCTGCATC	NA	False	NA	-5	True	TATAAA	-24	NA	135573994	135439014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ES.27421.74	chr5	-	4424	30	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	5969	-3635	intron_retention	FALSE	canonical	1	1	junction_29	57.303227907827	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCTCCGTCTGCCTGC	NA	False	NA	-14	True	TATAAA	-15	NA	135512143	135439023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135511989
ES.27421.75	chr5	-	3920	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	15	-3635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.4074214468694	461	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCTCCGTCTGCCTGC	9625	False	NA	-14	True	TATAAA	-15	NA	135518097	135439023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455283_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460316_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.77	chr5	-	4294	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	32	-3636	intron_retention	FALSE	canonical	0	0	junction_12	56.906756091776	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTCTCCGTCTGCCTG	9642	False	NA	-15	True	TATAAA	-14	NA	135518080	135439024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458223_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.78	chr5	-	3890	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	14	-3636	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_31	56.8896919023566	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTCTCCGTCTGCCTG	NA	False	NA	-15	True	TATAAA	-14	NA	135573955	135439024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ES.27421.79	chr5	-	4219	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-3637	intron_retention	FALSE	non_canonical	0	0	junction_29	69.5988186362064	486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTTCTCCGTCTGCCT	NA	False	NA	-16	True	TATAAA	-13	NA	135573974	135439025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487091_135489258_135489325_135573790
ES.27421.8	chr5	-	7947	33	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-193	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	69.1699672907252	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGTGATAAAGGGC	9417	False	NA	-1	True	AATAAA	-21	NA	135518305	135435387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135511989_135512204_135517934
ES.27421.83	chr5	-	4148	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	39	-3643	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGTGGTTCCTTCTCCGT	9649	False	NA	-22	True	TATAAA	-7	NA	135518073	135439031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.84	chr5	-	3401	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-19	-4157	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTCCCGTTTTTAA	9591	False	NA	NA	False	NA	NA	NA	135518131	135439545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.85	chr5	-	3364	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-51	-4202	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGGGTCCTCTAACTGC	9559	False	NA	NA	False	NA	NA	NA	135518163	135439590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.86	chr5	-	3664	31	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-52	-4218	intron_retention	FALSE	canonical	2	76	junction_15	42.4266818562722	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTTTGGCAGTTCGA	9558	False	NA	NA	False	NA	NA	NA	135518164	135439606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.87	chr5	-	3592	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-14	-4276	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	453	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATGTCCGACTCCAC	9596	False	NA	NA	False	NA	NA	NA	135518126	135439664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.88	chr5	-	3496	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-183	-4541	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_15	37.0834044943137	447	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTTTGCATGCATGAT	9427	False	NA	1	True	NA	NA	NA	135518295	135439929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.9	chr5	-	8034	31	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-180	0	intron_retention	FALSE	canonical	2	120	junction_15	37.0834044943137	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTGGTGATAAAGGG	9430	False	NA	-2	True	AATAAA	-20	NA	135518292	135435388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.91	chr5	-	3983	30	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	-9	-5197	combination_of_known_junctions	FALSE	canonical	2	76	junction_14	42.9346764831026	443	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGAAGTAAAACAGTGCT	9601	False	NA	NA	False	NA	NA	NA	135518121	135440585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.92	chr5	-	1228	1	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	342	860	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCACGAGTAGTGCCACA	2267	False	NA	NA	False	NA	NA	NA	135463660	135462432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135462400_135463700
ES.27421.93	chr5	-	2122	15	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	39	837	combination_of_known_junctions	FALSE	canonical	2	166	junction_13	27.3932063676752	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	9649	False	NA	NA	False	NA	NA	NA	135518073	135462455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
ES.27421.94	chr5	-	176	1	Intergenic	novelGene_22849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	4985	False	NA	NA	False	NA	NA	NA	135522737	135522561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135522600_135522700
ES.27421.95	chr5	-	175	2	Genic_Genomic	ENSMUSG00000107029.2	novel	3471	1	NA	NA	2780	120121	multi-exon	TRUE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	135643373	135522561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_135522688_135643324
ES.27421.96	chr5	-	189	1	FSM	ENSMUSG00000107029.2	ENSMUST00000201893.2	3471	1	2778	504	2778	-504	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAATGAATAAC	NA	False	NA	NA	False	NA	NA	NA	135643375	135643186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135643200_135643400
ES.27422.1	chr5	+	180	2	Antisense	novelGene_ENSMUSG00000082001.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	561	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5155	False	NA	NA	False	NA	NA	NA	135645965	135721844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135646003_135721701
ES.27422.10	chr5	+	5322	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-14	1816	intron_retention	FALSE	non_canonical	0	0	junction_4	104.164233304911	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCTCTGTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	135661543	135677118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883_135673219_135673919
ES.27422.12	chr5	+	4183	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	37	143	-13	-71	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCCTGCCCTGGCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	135661544	135675159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ES.27422.13	chr5	+	4165	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	75	-33	-11	33	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAAGATCTGACTTCGG	NA	False	NA	NA	False	NA	NA	NA	135661546	135675263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.14	chr5	+	2271	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	76	1860	-10	-11	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTAAAAGAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	135661547	135673370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.15	chr5	+	2131	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	77	1999	-9	-150	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGCCTTTAATCTTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	135661548	135673231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.16	chr5	+	5579	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	1	1587	intron_retention	FALSE	non_canonical	0	0	junction_4	104.164233304911	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAGGACAGACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	135661558	135676889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883_135676620_135676819
ES.27422.17	chr5	+	2010	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	52	2301	2	-380	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGTGGCATACTGT	NA	False	NA	16	True	TATAAA	-20	NA	135661559	135673001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ES.27422.18	chr5	+	1329	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	88	2790	2	-941	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAATGACTGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	135661559	135672440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.19	chr5	+	4345	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	3	-72	intron_retention	FALSE	canonical	1	3	junction_2	114.447586256766	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCCTGCCCTGGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	135661560	135675158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664257_135664848_135665257_135667943_135668095_135671883
ES.27422.2	chr5	+	1856	1	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	11	-1095	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAAATTAGAGC	NA	False	NA	NA	False	NA	NA	NA	135661518	135663374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135661500_135663400
ES.27422.20	chr5	+	2816	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-6	-203	intron_retention	FALSE	canonical	3	6	junction_2	113.58339447296	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGTCTCATAAAAGAAT	NA	False	NA	NA	False	GATAAA	-30	NA	135661563	135673178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664711_135664848_135665257_135667943_135668095_135671883
ES.27422.22	chr5	+	1946	1	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	-4	-958	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTATGTTAGCCAT	NA	False	NA	NA	False	AATAAA	-16	NA	135661565	135663511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135661600_135663500
ES.27422.23	chr5	+	6118	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	58	-1813	-4	1813	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCGGTCTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	135661565	135677115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ES.27422.24	chr5	+	2080	6	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-3	-381	intron_retention	FALSE	canonical	1	1	junction_2	115.641860932795	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661566	135673000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664078_135664178_135664257_135664848_135665257_135667943_135668095_135671883
ES.27422.25	chr5	+	1316	4	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	1	501	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	113.774631032874	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAGAGAAAAGATAC	NA	False	NA	NA	False	AATAAA	-18	NA	135661570	135669656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135661773_135664848_135665257_135667943_135668095_135669101
ES.27422.26	chr5	+	2098	4	NNC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	3	-152	intron_retention	FALSE	canonical	0	0	junction_1	118.280269792651	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACATGCCTTTAATCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	135661572	135673229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664855_135665257_135667943_135668095_135671883
ES.27422.27	chr5	+	1312	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	3	394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.872243706331	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGCCCTGTGGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	135661572	135669549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135669116
ES.27422.28	chr5	+	1869	4	NNC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	3	-381	intron_retention	FALSE	canonical	0	0	junction_1	118.280269792651	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661572	135673000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664855_135665257_135667943_135668095_135671883
ES.27422.29	chr5	+	1986	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	3	-384	intron_retention	FALSE	canonical	0	0	junction_2	115.319935397138	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGGTGTGTGGCATA	NA	False	NA	12	True	TATAAA	-16	NA	135661572	135672997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664078_135664855_135665257_135667943_135668095_135671883
ES.27422.3	chr5	+	1925	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	53	2229	17	-380	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGTGGCATACTGT	NA	False	NA	16	True	TATAAA	-20	NA	135661524	135673001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.30	chr5	+	4654	4	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	-3	-384	intron_retention	FALSE	canonical	2	4	junction_3	113.774631032874	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGGTGTGTGGCATA	NA	False	NA	12	True	TATAAA	-16	NA	135661573	135672997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135661773_135664848_135665257_135667943_135668095_135669101
ES.27422.31	chr5	+	1644	4	NNC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	0	-380	intron_retention	FALSE	canonical	0	0	junction_2	102.765104323728	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGTGGCATACTGT	NA	False	NA	16	True	TATAAA	-20	NA	135661576	135673001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664848_135665028_135667943_135668095_135671883
ES.27422.32	chr5	+	5987	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	105	-1885	0	1813	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCGGTCTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	135661576	135677115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.33	chr5	+	4329	1	NIC	ENSMUSG00000039917.11	novel	4207	4	NA	NA	3287	-380	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTGTGGCATACTGT	NA	False	NA	16	True	TATAAA	-20	NA	135668672	135673001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135668700_135673000
ES.27422.34	chr5	+	177	1	Intergenic	novelGene_22851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	6893	False	NA	NA	False	NA	NA	NA	135696091	135696268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135696100_135696300
ES.27422.35	chr5	+	2557	16	NIC	ENSMUSG00000005514.15	novel	918	8	NA	NA	-53	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	64.9938116712319	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTGTTGATTGAGT	1581	False	NA	15	True	AATAAA	-15	NA	135698833	135764181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135698971_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.36	chr5	+	457	2	NIC	ENSMUSG00000005514.15	novel	918	8	NA	NA	2	112	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCCTAGGAACAGCCAT	1636	False	NA	NA	False	NA	NA	NA	135698888	135713948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135698971_135713573
ES.27422.37	chr5	+	2523	16	NIC	ENSMUSG00000005514.15	novel	747	7	NA	NA	-25	-2	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	67.5629747387987	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTGGTGTTGATTG	6157	False	NA	12	True	AATAAA	-12	NA	135703409	135764178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135703516_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.38	chr5	+	1093	1	Intergenic	novelGene_22852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAGTCCAGGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	135710218	135711311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135710200_135711300
ES.27422.39	chr5	+	3516	13	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	54	3	intron_retention	FALSE	canonical	3	232	junction_2	24.8322147399077	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTGATTGAGTTT	1955	False	NA	17	True	AATAAA	-17	NA	135717943	135764183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759823_135759946_135760516_135761336_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.4	chr5	+	1475	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	57	2675	21	-826	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGAGTACTTTGATAA	NA	False	NA	NA	False	NA	NA	NA	135661528	135672555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.40	chr5	+	3311	14	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	232	junction_2	23.6968027703836	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTGGTGTTGATTG	2007	False	NA	12	True	AATAAA	-12	NA	135717995	135764178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.41	chr5	+	2528	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	109	-1	-13	1	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTGTTGATTGAGT	2010	False	NA	15	True	AATAAA	-15	NA	135717998	135764181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.42	chr5	+	2888	15	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	7	1	intron_retention	FALSE	canonical	3	231	junction_8	24.0619947601344	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGGTGTTGATTGAGT	2030	False	NA	15	True	AATAAA	-15	NA	135718018	135764181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.43	chr5	+	3330	15	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	7	2	intron_retention	FALSE	canonical	3	231	junction_8	23.9200411234374	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTGTTGATTGAGTT	2030	False	NA	16	True	AATAAA	-16	NA	135718018	135764182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.44	chr5	+	2612	15	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	129	1	7	-1	intron_retention	FALSE	canonical	3	231	junction_9	20.3675412039322	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	2030	False	NA	13	True	AATAAA	-13	NA	135718018	135764179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474
ES.27422.45	chr5	+	2483	16	NNC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.3288447348782	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	2032	False	NA	13	True	AATAAA	-13	NA	135718020	135764179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135718086_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.46	chr5	+	4172	12	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	33	-2	intron_retention	FALSE	canonical	3	232	junction_2	25.4607135383967	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTGGTGTTGATTG	2056	False	NA	12	True	AATAAA	-12	NA	135718044	135764178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.47	chr5	+	2966	14	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	33	-1	intron_retention	FALSE	canonical	3	231	junction_8	21.0150692621908	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	2056	False	NA	13	True	AATAAA	-13	NA	135718044	135764179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474
ES.27422.48	chr5	+	2588	15	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	33	3	intron_retention	FALSE	canonical	3	231	junction_9	23.8465545365637	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTTGATTGAGTTT	2056	False	NA	17	True	AATAAA	-17	NA	135718044	135764183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.49	chr5	+	4181	12	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	43	0	intron_retention	FALSE	canonical	3	232	junction_2	21.2167094604837	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2066	False	NA	14	True	AATAAA	-14	NA	135718054	135764180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474
ES.27422.5	chr5	+	3043	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	6	junction_2	113.58339447296	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTTTCTTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	135661535	135673377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664711_135664848_135665257_135667943_135668095_135671883
ES.27422.50	chr5	+	3666	14	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	47	-2	intron_retention	FALSE	canonical	3	231	junction_7	24.7990742335321	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTGGTGTTGATTG	2070	False	NA	12	True	AATAAA	-12	NA	135718058	135764178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.51	chr5	+	2942	1	Intergenic	novelGene_22853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATCAACCAACCAAGCT	2936	False	NA	NA	False	NA	NA	NA	135718924	135721866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135718900_135721900
ES.27422.52	chr5	+	7203	1	Intergenic	novelGene_22856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAGTAAAAAAAAAAA	481	False	NA	NA	False	NA	NA	NA	135730782	135737985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135730800_135738000
ES.27422.53	chr5	+	163	1	Intergenic	novelGene_22857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCAGAGTGTTGGTC	174	False	NA	NA	False	NA	NA	NA	135732934	135733097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135732900_135733100
ES.27422.54	chr5	+	2532	15	NIC	ENSMUSG00000005514.15	novel	673	5	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	69.9187575194327	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTGGTGTTGATTG	NA	False	NA	12	True	AATAAA	-12	NA	135754588	135764178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135754896_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ES.27422.55	chr5	+	3334	1	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	443	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	NA	False	NA	14	True	AATAAA	-14	NA	135760846	135764180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135760800_135764200
ES.27422.6	chr5	+	4070	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	65	72	-21	-72	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCCTGCCCTGGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	135661536	135675158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.7	chr5	+	5689	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	68	-1550	-18	1478	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	135661539	135676780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ES.27422.8	chr5	+	5939	6	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-14	1813	intron_retention	FALSE	non_canonical	0	0	junction_5	108.084411456972	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCGGTCTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	135661543	135677115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883_135676619_135676819
ES.27422.9	chr5	+	5819	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	-14	1813	intron_retention	FALSE	non_canonical	0	0	junction_4	104.164233304911	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCGGTCTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	135661543	135677115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883_135676619_135676819
ES.27423.1	chr5	-	1352	1	FSM	ENSMUSG00000082001.4	ENSMUST00000119632.2	358	1	-930	-64	-930	64	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGGCGGAGATCTAGCT	NA	False	NA	NA	False	NA	NA	NA	135667280	135665928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135665900_135667300
ES.27424.1	chr5	-	213	1	Intergenic	novelGene_22854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAGCCACTGGAATAA	NA	False	NA	NA	False	NA	NA	NA	135719871	135719658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135719700_135719900
ES.27425.1	chr5	-	107	1	Intergenic	novelGene_22855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	135723498	135723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135723400_135723500
ES.27426.1	chr5	-	1512	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	202	-155	-38	155	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACAGAAAACAACTTTA	5265	False	NA	NA	False	TATAAA	-20	NA	135773100	135764183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.10	chr5	-	1297	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	207.477530397474	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5290	False	NA	-9	True	AATAAA	-16	NA	135773075	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765834_135766039_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.11	chr5	-	1331	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_11	191.865612403944	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5278	False	NA	-9	True	AATAAA	-16	NA	135773087	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772909
ES.27426.12	chr5	-	1382	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-46	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	209.591929375881	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5257	False	NA	-9	True	AATAAA	-16	NA	135773108	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765712_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.14	chr5	-	1627	10	NIC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-33	-5	intron_retention	FALSE	canonical	3	674	junction_8	35.0294408804232	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5270	False	NA	-9	True	AATAAA	-16	NA	135773095	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135764660_135764750_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.15	chr5	-	1398	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	209.050865730831	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5290	False	NA	-9	True	AATAAA	-16	NA	135773075	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135771008_135771134_135771254_135772901
ES.27426.16	chr5	-	1346	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-72	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	209.134343314815	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATCTGATGGACTGTG	5231	False	NA	-10	True	AATAAA	-15	NA	135773134	135764344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771223_135772909
ES.27426.2	chr5	-	1400	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	163	-4	-77	4	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGTGGATGTGTTTG	5226	False	NA	0	True	AATAAA	-25	NA	135773139	135764334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.3	chr5	-	1458	11	NIC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-57	-1	intron_retention	FALSE	canonical	3	674	junction_9	34.613436697329	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATGGACTGTGGATGT	5246	False	NA	-5	True	AATAAA	-20	NA	135773119	135764339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.4	chr5	-	1552	13	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	312.749222842981	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATGGACTGTGGAT	5281	False	NA	-7	True	AATAAA	-18	NA	135773084	135764341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135771008_135771134_135771254_135772467_135772611_135772901
ES.27426.5	chr5	-	1504	13	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	267.920528743548	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATGGACTGTGGAT	5258	False	NA	-7	True	AATAAA	-18	NA	135773107	135764341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772467_135772611_135772901
ES.27426.8	chr5	-	1342	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	204.293056398307	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATGGACTGTGGAT	5257	False	NA	-7	True	AATAAA	-18	NA	135773108	135764341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765181_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ES.27426.9	chr5	-	1557	11	NIC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	-45	-5	intron_retention	FALSE	canonical	3	677	junction_7	33.9770510786325	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCTGATGGACTGTGG	5258	False	NA	-9	True	AATAAA	-16	NA	135773107	135764343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135771254_135772901
ES.27427.1	chr5	-	174	1	Intergenic	novelGene_22858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	135787618	135787444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135787400_135787600
ES.27428.1	chr5	+	1474	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	-9	-9	-9	2	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCCTTTTCCATCAGC	444	False	NA	47	True	AGTAAA	-34	NA	135807324	135819254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.10	chr5	+	1280	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1636.06127635856	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	620	False	NA	34	True	AGTAAA	-21	NA	135807500	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807648_135812155_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.11	chr5	+	1208	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1731.68405705815	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	621	False	NA	36	True	AGTAAA	-23	NA	135807501	135819243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135818054_135818155_135818479_135818632_135818930
ES.27428.12	chr5	+	2243	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	170	-957	-12	950	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGCATTGCCTTAATTG	623	False	NA	NA	False	NA	NA	NA	135807503	135820202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.13	chr5	+	3626	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-8	2415	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1731.68405705815	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGCAAGCAGGGACTG	627	False	NA	NA	False	NA	NA	NA	135807507	135821667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135818054_135818155_135818479_135818632_135818930
ES.27428.14	chr5	+	1472	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	4657	junction_7	295.607365073528	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTCTCTGTAGATTTCC	628	False	NA	35	True	AGTAAA	-22	NA	135807508	135819242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.16	chr5	+	1268	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	1674.18614556447	1211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAAGGTCTCTGTAGAT	628	False	NA	31	True	AGTAAA	-18	NA	135807508	135819238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818936
ES.27428.17	chr5	+	1298	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1677.35203799769	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	631	False	NA	34	True	AGTAAA	-21	NA	135807511	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818455_135818632_135818930
ES.27428.18	chr5	+	1279	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1675.16586865301	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGGTCTCTGTAGA	631	False	NA	30	True	AGTAAA	-17	NA	135807511	135819237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807656_135812158_135812337_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.19	chr5	+	2857	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	4657	junction_7	286.955944851669	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	632	False	NA	36	True	AGTAAA	-23	NA	135807512	135819243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135818155_135818479_135818632_135818930
ES.27428.2	chr5	+	2480	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	4657	junction_7	269.173261855555	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	609	False	NA	36	True	AGTAAA	-23	NA	135807489	135819243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.20	chr5	+	1185	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1785.87927237823	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGGTCTCTGTAGA	632	False	NA	30	True	AGTAAA	-17	NA	135807512	135819237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.22	chr5	+	4700	6	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	7	-4	intron_retention	FALSE	canonical	3	4657	junction_5	314.920053346877	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	642	False	NA	34	True	AGTAAA	-21	NA	135807522	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135815213_135816394_135818155_135818479_135818632_135818930
ES.27428.23	chr5	+	3634	7	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	7	-4	intron_retention	FALSE	canonical	3	4657	junction_6	287.261591971886	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	642	False	NA	34	True	AGTAAA	-21	NA	135807522	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.25	chr5	+	2130	3	NIC	ENSMUSG00000019179.11	novel	1112	8	NA	NA	7625	-8	intron_retention	FALSE	canonical	3	4781	junction_2	192.5	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAGGTCTCTGTAGA	8320	False	NA	30	True	AGTAAA	-17	NA	135815200	135819237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135816473_135818054_135818155_135818479
ES.27428.3	chr5	+	1258	6	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	156	2248	0	492	5prime_fragment	FALSE	canonical	3	4702	junction_3	288.689729640665	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTTGGCGTCCACCCT	609	False	NA	NA	False	TATAAA	-11	NA	135807489	135816997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394
ES.27428.4	chr5	+	3505	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	156	-2205	0	2198	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGACCCAAAGTCCATAT	609	False	NA	NA	False	AATAAA	-20	NA	135807489	135821450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.5	chr5	+	2958	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	4657	junction_7	274.888400361058	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	610	False	NA	36	True	AGTAAA	-23	NA	135807490	135819243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.7	chr5	+	3280	7	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	2	-4	intron_retention	FALSE	canonical	3	4657	junction_6	277.865924903041	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	611	False	NA	34	True	AGTAAA	-21	NA	135807491	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_135807656_135812158_135812328_135813037_135814893_135815086_135815213_135816394_135816473_135818054_135818632_135818930
ES.27428.8	chr5	+	1279	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1679.44328573489	1211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCAAGGTCTCTGTAG	611	False	NA	29	True	AGTAAA	-16	NA	135807491	135819236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814792_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27428.9	chr5	+	1288	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1672.64057705175	1211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGTCTCTGTAGATTTC	611	False	NA	34	True	AGTAAA	-21	NA	135807491	135819241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814887_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ES.27429.1	chr5	+	173	1	Intergenic	novelGene_22859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	135824210	135824383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135824200_135824400
ES.2743.1	chr10	-	153	1	Intergenic	novelGene_2089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	45452181	45452028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45452000_45452200
ES.27430.1	chr5	+	176	1	Intergenic	novelGene_22860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAGAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	135826767	135826943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135826800_135826900
ES.27431.1	chr5	+	197	1	Intergenic	novelGene_22861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAGAAACATAAAC	3392	False	NA	NA	False	NA	NA	NA	135866440	135866637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135866400_135866600
ES.27432.1	chr5	-	175	1	Intergenic	novelGene_22862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	135866848	135866673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135866700_135866800
ES.27433.1	chr5	+	152	1	Intergenic	novelGene_22863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135904320	135904472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135904300_135904500
ES.27434.1	chr5	-	177	1	Intergenic	novelGene_22864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAACAAAAAACA	5629	False	NA	NA	False	NA	NA	NA	135905947	135905770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135905800_135905900
ES.27435.1	chr5	-	199	1	Intergenic	novelGene_22865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTCTACTTGCCTCTG	3601	False	NA	NA	False	TTTAAA	-20	NA	135907975	135907776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135907800_135908000
ES.27436.1	chr5	+	1105	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	-202	0	-202	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCCAGAGTTATTA	NA	False	NA	7	True	AATAAA	-25	NA	135916570	135918417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_135917289_135917902_135917967_135918094
ES.27436.2	chr5	+	807	3	NNC	ENSMUSG00000004951.11	novel	903	3	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1101	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTCTGACTCCAGAGTTA	NA	False	NA	4	True	AATAAA	-22	NA	135916854	135918414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_135917289_135917902_135917967_135918105
ES.27436.3	chr5	+	389	2	ISM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	1122	6	1023	-4	3prime_fragment	FALSE	canonical	3	2181	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGTCTGACTCCAGAG	NA	False	NA	1	True	AATAAA	-19	NA	135917894	135918411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_135917967_135918094
ES.27437.1	chr5	+	3035	1	Intergenic	novelGene_22867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGGGGACCCAGTCAT	NA	False	NA	NA	False	AAGAAA	-4	NA	135932279	135935314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135932300_135935300
ES.27438.1	chr5	+	1324	1	Antisense	novelGene_ENSMUSG00000051391.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	3127	False	NA	NA	False	NA	NA	NA	135961232	135962556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_135961200_135962600
ES.27439.1	chr5	+	757	1	Intergenic	novelGene_22868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACAACTGTTTGAACCC	998	False	NA	NA	False	NA	NA	NA	135963947	135964704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135963900_135964700
ES.2744.1	chr10	+	3720	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	-9	74	-9	0	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1769	False	NA	8	True	AATAAA	-20	NA	45453915	45588367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.10	chr10	+	3594	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	11	180	11	6	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTCTGTGCTCAGTT	1789	False	NA	10	True	ATTAAA	-23	NA	45453935	45588261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.11	chr10	+	3515	23	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	31.4059003773558	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTTGCATCTTTCTG	1795	False	NA	1	True	ATTAAA	-14	NA	45453941	45588252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45585969_45586091_45587529
ES.2744.12	chr10	+	5853	24	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	30.2934607104362	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1795	False	NA	8	True	AATAAA	-20	NA	45453941	45588367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45551117_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.13	chr10	+	3354	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	17	-145	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACTTATATTGCAATGG	1795	False	NA	NA	False	CATAAA	-17	NA	45453941	45588110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.14	chr10	+	3724	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	37.3451432213377	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1796	False	NA	3	True	AATAAA	-15	NA	45453942	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45515863_45515900_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.15	chr10	+	3683	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTTCTTAAGTTTGT	1796	False	NA	81	True	ATTAAA	-12	NA	45453942	45588440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.16	chr10	+	1769	10	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	46.7976996374611	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGCATCTTTCTGT	1797	False	NA	2	True	ATTAAA	-15	NA	45453943	45588253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.18	chr10	+	3991	24	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	24	234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.8572533324743	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAAATGTGACCTTTCTC	1802	False	NA	NA	False	AATAAA	-21	NA	45453948	45588675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481608_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.19	chr10	+	3610	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	30	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	37.3451432213377	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTTCTGTGCTCAGT	1808	False	NA	9	True	ATTAAA	-22	NA	45453954	45588260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45515863_45515900_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.2	chr10	+	3891	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.4183864582625	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1779	False	NA	3	True	AATAAA	-15	NA	45453925	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481802_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45532076_45532142_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.20	chr10	+	1688	6	NNC	ENSMUSG00000038822.16	novel	385	5	NA	NA	35	1093	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.3365061581093	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTTTTAATTAAAAT	1813	False	NA	NA	False	ATTAAA	-10	NA	45453959	45482822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45482601_45482667
ES.2744.21	chr10	+	3554	24	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	35	3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	29.4981336117804	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTTTCTGTGCTCA	1813	False	NA	7	True	ATTAAA	-20	NA	45453959	45588258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548647_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.22	chr10	+	3457	22	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_18	38.1182073611326	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1817	False	NA	8	True	AATAAA	-20	NA	45453963	45588367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.23	chr10	+	3618	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	40	5	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	29.0870736107926	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAAGTTTGTTCATAT	1818	False	NA	87	True	ATTAAA	-18	NA	45453964	45588446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.24	chr10	+	7421	21	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	40	-5	intron_retention	FALSE	canonical	3	100	junction_16	17.0601875722396	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1818	False	NA	3	True	AATAAA	-15	NA	45453964	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.25	chr10	+	3697	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	42	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.3768583335454	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTATTTGCATCTTTCT	1820	False	NA	0	True	ATTAAA	-13	NA	45453966	45588251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45491168_45491312_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576671_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.26	chr10	+	3687	26	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.720128087644	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGCATCTTTCTGT	1821	False	NA	2	True	ATTAAA	-15	NA	45453967	45588253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45515863_45515900_45518139_45518237_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.28	chr10	+	3223	20	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	48	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.5801589352569	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGCATCTTTCTGT	1826	False	NA	2	True	ATTAAA	-15	NA	45453972	45588253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.29	chr10	+	3639	24	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	54	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	29.4981336117804	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1832	False	NA	3	True	AATAAA	-15	NA	45453978	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548647_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.30	chr10	+	3602	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	72	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	38.4122150349194	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCATCTTTCTGTGCTC	1850	False	NA	6	True	ATTAAA	-19	NA	45453996	45588257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45586218_45586292_45587529
ES.2744.32	chr10	+	2434	11	ISM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	79	58414	79	5284	5prime_fragment	FALSE	canonical	3	119	junction_9	15.679604586851	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGAGTGATGTGTGTA	1857	False	NA	NA	False	ATTAAA	-18	NA	45454003	45530027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683
ES.2744.33	chr10	+	3748	25	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	115	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	43.4044088582408	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1893	False	NA	3	True	AATAAA	-15	NA	45454039	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481802_45494593_45494726_45514416_45514500_45515863_45515900_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.34	chr10	+	3430	24	NIC	ENSMUSG00000038822.16	novel	1611	10	NA	NA	-16	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	29.1722606931799	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCATCTTTCTGTGCTC	2213	False	NA	6	True	ATTAAA	-19	NA	45454359	45588257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454511_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.35	chr10	+	3378	23	NIC	ENSMUSG00000038822.16	novel	1611	10	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.387765931148	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	2238	False	NA	3	True	AATAAA	-15	NA	45454384	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454511_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.36	chr10	+	3257	23	NIC	ENSMUSG00000038822.16	novel	1611	10	NA	NA	72	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	37.3050026556827	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	2301	False	NA	4	True	ATTAAA	-17	NA	45454447	45588255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454511_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.37	chr10	+	7991	1	Intergenic	novelGene_2090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAACAACAACAACAACA	NA	False	NA	NA	False	AATGAA	-20	NA	45473355	45481346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45473400_45481300
ES.2744.38	chr10	+	3877	1	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	-33273	-6530	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	45514336	45518213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45514300_45518200
ES.2744.39	chr10	+	2057	12	ISM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	93302	74	-383	0	3prime_fragment	FALSE	canonical	3	100	junction_7	11.9717297851892	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	NA	False	NA	8	True	AATAAA	-20	NA	45547226	45588367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.4	chr10	+	687	5	FSM	ENSMUSG00000038822.16	ENSMUST00000131568.2	385	5	-308	6	4	-6	multi-exon	FALSE	canonical	3	140	junction_3	9.12414379544733	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGGTGACTGTGCTG	1782	False	NA	NA	False	ATTAAA	-13	NA	45453928	45481723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604
ES.2744.5	chr10	+	3382	22	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_18	38.1182073611326	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCTTTCTGTGCTCAG	1784	False	NA	8	True	ATTAAA	-21	NA	45453930	45588259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.6	chr10	+	3460	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	29.0870736107926	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	1785	False	NA	4	True	ATTAAA	-17	NA	45453931	45588255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.7	chr10	+	3455	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	8	322	8	-136	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCAATGGGTTTTATTT	1786	False	NA	NA	False	CATAAA	-26	NA	45453932	45588119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.8	chr10	+	3608	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	8	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.5710728095454	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATATTTCTTTATTTG	1786	False	NA	3	True	AATAAA	-15	NA	45453932	45588362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.2744.9	chr10	+	3514	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	10	8	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGTGCTCAGTTTC	1788	False	NA	12	True	ATTAAA	-25	NA	45453934	45588263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ES.27440.1	chr5	-	1239	2	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	25334	22138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTTATGA	NA	False	NA	-6	True	NA	NA	NA	135938070	135915124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135915252_135936958
ES.27440.10	chr5	-	3611	3	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	-8	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCGGCGGTGCCCAGC	NA	False	NA	-29	True	AATAAA	-11	NA	135963478	135937265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135940506_135941571_135941641_135963176
ES.27440.11	chr5	-	3462	3	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	-216	-3	intron_retention	FALSE	canonical	2	4	junction_2	460.5	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCGGCGGTGCCCAGC	NA	False	NA	-29	True	AATAAA	-11	NA	135963686	135937265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135940506_135963176_135963288_135963575
ES.27440.12	chr5	-	3312	3	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_1	462.5	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCGGCGGTGCCCAGC	NA	False	NA	-29	True	AATAAA	-11	NA	135963449	135937265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135940032_135940232_135940506_135963176
ES.27440.13	chr5	-	2251	1	NIC	ENSMUSG00000051391.10	novel	1610	3	NA	NA	23759	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	1125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCGTGTTTCGCTAAGG	NA	False	NA	NA	False	NA	NA	NA	135939645	135937394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135937400_135939600
ES.27440.14	chr5	-	3096	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-39	463	-22	-463	multi-exon	FALSE	canonical	3	925	junction_1	0	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTAAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	135963492	135937725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135940506_135963176
ES.27440.15	chr5	-	2757	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	4	759	2	-759	multi-exon	FALSE	canonical	3	925	junction_1	0	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTTTCTCTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	135963449	135938021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135940506_135963176
ES.27440.16	chr5	-	1603	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	4	1913	2	-1913	multi-exon	FALSE	canonical	3	925	junction_1	0	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGGGTTCTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	135963449	135939175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135940506_135963176
ES.27440.17	chr5	-	1293	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	-22	2249	-5	-2249	multi-exon	FALSE	canonical	3	925	junction_1	0	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCAGTGCGTTCTGTGGTT	NA	False	NA	NA	False	AAGAAA	-22	NA	135963475	135939511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135940506_135963176
ES.27440.18	chr5	-	3946	1	Genic_Genomic	ENSMUSG00000051391.10	novel	NA	NA	NA	NA	-8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	872	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTCCATGTCTGATG	NA	False	NA	NA	False	ATTAAA	-15	NA	135963478	135959532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_135959500_135963500
ES.27440.2	chr5	-	2522	1	FSM	ENSMUSG00000105047.2	ENSMUST00000196247.2	157	1	-1497	-868	-1497	868	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGTGAGCCT	7789	False	NA	NA	False	NA	NA	NA	135926837	135924315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135924300_135926800
ES.27440.3	chr5	-	1405	2	Genic_Genomic	ENSMUSG00000105047.2	novel	157	1	NA	NA	-4179	439	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAACCAAACCAA	5107	False	NA	NA	False	NA	NA	NA	135929519	135924744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_135925440_135928809
ES.27440.4	chr5	-	3722	1	Intergenic	novelGene_22866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGCCAAAAAAGAAAA	2149	False	NA	NA	False	NA	NA	NA	135932477	135928755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135928800_135932500
ES.27440.6	chr5	-	3552	3	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	-1616	0	intron_retention	FALSE	canonical	0	0	junction_2	462.5	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	9450	False	NA	-26	True	AATAAA	-14	NA	135965086	135937262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135940506_135963176_135963288_135964888
ES.27440.7	chr5	-	2207	2	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	23143	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCGGCGGTGCCCAGCTT	NA	False	NA	-27	True	AATAAA	-13	NA	135940261	135937263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135938571_135939361
ES.27440.9	chr5	-	3389	3	NNC	ENSMUSG00000051391.10	novel	3520	2	NA	NA	-244	-1	intron_retention	FALSE	canonical	0	0	junction_2	462.5	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCGGCGGTGCCCAGCTT	NA	False	NA	-27	True	AATAAA	-13	NA	135963714	135937263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_135940506_135963176_135963288_135963678
ES.27441.1	chr5	+	227	1	Intergenic	novelGene_22869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7756	False	NA	NA	False	NA	NA	NA	135970705	135970932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135970700_135970900
ES.27442.1	chr5	+	133	1	Intergenic	novelGene_22870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	135975927	135976060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135975900_135976100
ES.27443.1	chr5	+	131	1	Intergenic	novelGene_22871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	135976686	135976817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135976700_135976800
ES.27444.1	chr5	-	176	1	Intergenic	novelGene_22872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAACAAAACC	NA	False	NA	NA	False	NA	NA	NA	135988053	135987877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_135987900_135988100
ES.27445.1	chr5	+	129	1	Intergenic	novelGene_22873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	3792	False	NA	NA	False	NA	NA	NA	135998632	135998761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_135998600_135998800
ES.27446.1	chr5	-	2437	10	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	-6	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	5.13761245408751	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAACTGAGGTCATTG	NA	False	NA	-6	True	AATAAA	-17	NA	136003357	135989075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999281_136003115
ES.27446.2	chr5	-	2811	11	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	4.80520551069359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTAACTGAGGTCATT	NA	False	NA	-7	True	AATAAA	-16	NA	136003378	135989076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999320_136003115
ES.27446.3	chr5	-	2154	2	ISM	ENSMUSG00000029699.14	ENSMUST00000054895.4	1191	3	-730	0	-730	0	intron_retention	FALSE	canonical	3	14	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAACTGAGGTCAT	NA	False	NA	-8	True	AATAAA	-15	NA	135991911	135989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_135990063_135990742
ES.27446.4	chr5	-	2771	11	FSM	ENSMUSG00000029699.14	ENSMUST00000111152.8	2745	11	-27	1	7	0	multi-exon	FALSE	canonical	1	1	junction_8	4.62709412050371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAACTGAGGTCAT	NA	False	NA	-8	True	AATAAA	-15	NA	136003378	135989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_135990063_135990742_135990821_135991776_135992089_135992209_135992285_135993472_135993551_135994424_135994740_135994928_135995007_135996591_135996898_135997077_135997114_135999035_135999281_136003115
ES.27446.5	chr5	-	1383	4	NIC	ENSMUSG00000029699.14	novel	2745	11	NA	NA	58	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.49443825784929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTTTAACTGAGGTCA	NA	False	NA	-9	True	AATAAA	-14	NA	135994670	135989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_135990063_135992209_135992285_135993472_135993551_135994424
ES.27447.1	chr5	+	156	1	Intergenic	novelGene_22874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	8941	False	NA	NA	False	NA	NA	NA	136003781	136003937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136003800_136003900
ES.27448.2	chr5	+	1230	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	92	1	23	-1	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGAGTGTGGTTTAAT	NA	False	NA	NA	False	AATAAA	-12	NA	136009044	136017477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
ES.27448.4	chr5	+	167	1	Intergenic	novelGene_22876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATTTTTAAAATGTA	NA	False	NA	NA	False	AAAAAG	-2	NA	136013733	136013900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136013700_136013900
ES.27449.1	chr5	-	137	1	Intergenic	novelGene_22875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136010220	136010083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136010100_136010200
ES.2745.1	chr10	-	2997	2	Antisense	novelGene_ENSMUSG00000111491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	45536019	45532736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_45533315_45533600
ES.27450.1	chr5	-	168	1	Intergenic	novelGene_22877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAAGAATGCA	NA	False	NA	NA	False	NA	NA	NA	136021590	136021422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136021400_136021600
ES.27451.1	chr5	+	2510	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	-10	-7	1	0	multi-exon	TRUE	canonical	3	84	junction_5	18.5279235376575	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGGGAAGTTTTGTG	8460	False	NA	15	True	AATAAA	-20	NA	136023654	136061725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.2	chr5	+	2347	9	NIC	ENSMUSG00000004947.16	novel	2545	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.5603994714708	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGGGAAGTTTTGTG	8460	False	NA	15	True	AATAAA	-20	NA	136023654	136061725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136023821_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.3	chr5	+	2648	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	1	1	1	0	multi-exon	TRUE	canonical	3	47	junction_6	35.5758344947803	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGGGAAGTTTTGTG	8460	False	NA	15	True	AATAAA	-20	NA	136023654	136061725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.4	chr5	+	1893	5	NNC	ENSMUSG00000004947.16	novel	2493	10	NA	NA	2	7698	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	55.578772926361	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAACCCTGGAGCAGGG	8461	False	NA	NA	False	NA	NA	NA	136023655	136048748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136042066_136048727
ES.27451.5	chr5	+	2588	11	NIC	ENSMUSG00000004947.16	novel	2545	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	53.3423846486075	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATCTGTTGGGAAGTT	8461	False	NA	10	True	AATAAA	-15	NA	136023655	136061720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136023821_136024094_136024179_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.6	chr5	+	2584	11	NNC	ENSMUSG00000004947.16	novel	2650	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.1463121709045	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCATCTGTTGGGAAG	8472	False	NA	8	True	AATAAA	-13	NA	136023666	136061718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136023776_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.8	chr5	+	2520	10	NNC	ENSMUSG00000004947.16	novel	2545	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.564005848711	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTGGGAAGTTTTGTG	8509	False	NA	15	True	AATAAA	-20	NA	136023703	136061725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136023821_136025143_136025366_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ES.27451.9	chr5	+	6470	2	NIC	ENSMUSG00000004947.16	novel	5420	6	NA	NA	5859	-1	intron_retention	FALSE	canonical	3	144	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGGGAAGTTTTGT	NA	False	NA	14	True	AATAAA	-19	NA	136054270	136061724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136060130_136061113
ES.27452.1	chr5	+	156	1	Intergenic	novelGene_22878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	136079513	136079669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136079500_136079700
ES.27453.1	chr5	+	1611	4	NNC	ENSMUSG00000006143.13	novel	671	4	NA	NA	36	13316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCTATAATTTTGTTA	4845	False	NA	NA	False	AATAAA	-15	NA	136088937	136106496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136089136_136090036_136090114_136090360_136090482_136105281
ES.27454.1	chr5	-	1104	2	Antisense	novelGene_ENSMUSG00000006143.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAAGAGGGCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	136092946	136089613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_136090661_136092889
ES.27455.1	chr5	-	175	1	Intergenic	novelGene_22879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	136097618	136097443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136097400_136097600
ES.27456.1	chr5	-	178	1	Intergenic	novelGene_22880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	136104751	136104573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136104600_136104800
ES.27457.1	chr5	+	503	1	Intergenic	novelGene_22881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAGCAGAATGACAGGCG	4381	False	NA	NA	False	NA	NA	NA	136107749	136108252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136107700_136108300
ES.27457.2	chr5	+	176	1	Intergenic	novelGene_22882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAGTTCTACATCTT	4382	False	NA	NA	False	NA	NA	NA	136107750	136107926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136107800_136107900
ES.27458.1	chr5	+	3200	21	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	18	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	16.8471807730552	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	2170	False	NA	NA	False	AATAAA	-20	NA	136112787	136140714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124076_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.10	chr5	+	2956	21	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.2937749228069	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATGCTGAGGTGTTGGG	2195	False	NA	NA	False	AATAAA	-15	NA	136112812	136140709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121739_136121934_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.12	chr5	+	2863	21	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.1120301924164	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGAGGTGTTGGGTT	2221	False	NA	NA	False	AATAAA	-17	NA	136112838	136140711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121983_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130899_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.13	chr5	+	2842	21	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	16.8827574761945	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAATGCTGAGGTGTTG	2228	False	NA	NA	False	AATAAA	-13	NA	136112845	136140707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140273
ES.27458.14	chr5	+	3542	17	NNC	ENSMUSG00000004952.14	novel	3057	20	NA	NA	-1720	13	intron_retention	FALSE	non_canonical	0	0	junction_16	18.3877506781009	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAGAG	1526	False	NA	NA	False	AAAAAG	-11	NA	136118235	136138828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136133508_136134457_136134594_136135924_136136314_136138421
ES.27458.15	chr5	+	2440	17	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	2035	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.9460543261903	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	5281	False	NA	NA	False	AATAAA	-16	NA	136121990	136140710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136122122_136124380_136124463_136125514_136125647_136127541_136127630_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131522_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.16	chr5	+	4105	15	NNC	ENSMUSG00000004952.14	novel	600	7	NA	NA	-1735	1	intron_retention	FALSE	non_canonical	0	0	junction_1	19.5381625522557	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	5999	False	NA	NA	False	AATAAA	-16	NA	136122708	136140710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136123469_136123650_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.17	chr5	+	1953	13	NNC	ENSMUSG00000004952.14	novel	681	3	NA	NA	662	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1678149294841	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGCATGTGTACGTGTGT	8396	False	NA	NA	False	AATAAA	-15	NA	136125105	136134884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136125177_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ES.27458.18	chr5	+	2176	14	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	3012	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.354060865409	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAATGCTGAGGTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	136127455	136140707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136127630_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.19	chr5	+	1850	11	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	3024	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.7218783718167	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGCATGTGTACGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	136127467	136134884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136127634_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ES.27458.2	chr5	+	2895	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	19	0	19	0	multi-exon	FALSE	canonical	3	36	junction_7	10.6273232754067	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	2171	False	NA	NA	False	AATAAA	-20	NA	136112788	136140714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.20	chr5	+	1662	10	ISM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	16982	5830	-2996	-3	internal_fragment	FALSE	canonical	3	51	junction_2	8.49109918868569	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGCATGTGTACGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	136129751	136134884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ES.27458.21	chr5	+	1376	8	NIC	ENSMUSG00000004952.14	novel	3057	20	NA	NA	-1624	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	24.4131112314674	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	136131123	136140710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136140105_136140171_136140284
ES.27458.23	chr5	+	3409	5	ISM	ENSMUSG00000004952.14	ENSMUST00000100570.10	2660	20	19336	1882	-526	17	internal_fragment	FALSE	canonical	3	68	junction_4	5.1478150704935	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAAAGAGGAGG	NA	False	NA	NA	False	AAAAAG	-15	NA	136132221	136138832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924
ES.27458.3	chr5	+	3962	17	NIC	ENSMUSG00000004952.14	novel	3057	20	NA	NA	-17	0	intron_retention	FALSE	canonical	3	36	junction_7	10.6240808425953	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATGCTGAGGTGTTGGG	2173	False	NA	NA	False	AATAAA	-15	NA	136112790	136140709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136131282_136131381_136131520_136132133_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.4	chr5	+	3529	19	NIC	ENSMUSG00000004952.14	novel	3396	20	NA	NA	-15	1	intron_retention	FALSE	canonical	3	36	junction_7	10.2607967827691	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGAGGTGTTGGGT	2175	False	NA	NA	False	AATAAA	-16	NA	136112792	136140710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.5	chr5	+	3114	20	FSM	ENSMUSG00000004952.14	ENSMUST00000135344.8	3057	20	-55	-2	-11	2	multi-exon	FALSE	canonical	3	36	junction_7	10.66669552166	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGAGGTGTTGGGTT	2179	False	NA	NA	False	AATAAA	-17	NA	136112796	136140711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27458.6	chr5	+	1643	8	NNC	ENSMUSG00000004952.14	novel	2683	17	NA	NA	-5	-2766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.2056539294329	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTAGTTGGGTTGA	2185	False	NA	NA	False	NA	NA	NA	136112802	136128383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120052_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541
ES.27458.7	chr5	+	5044	16	NIC	ENSMUSG00000004952.14	novel	3057	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	36	junction_6	11.3540986236493	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATGTGTACGTGTGTGA	2188	False	NA	NA	False	AATAAA	-17	NA	136112805	136134886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457
ES.27458.8	chr5	+	2899	21	NNC	ENSMUSG00000004952.14	novel	2914	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.8951916236543	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGAGGTGTTGGGTTG	2191	False	NA	NA	False	AATAAA	-18	NA	136112808	136140712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130275_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ES.27459.1	chr5	+	593	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	53	0	-18	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9265	False	NA	30	True	AATAAA	-19	NA	136145537	136151801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ES.27459.3	chr5	+	2587	3	NIC	ENSMUSG00000039771.14	novel	646	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1104	junction_1	82	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9275	False	NA	30	True	AATAAA	-19	NA	136145547	136151801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136145660_136148848_136151118_136151595
ES.27459.4	chr5	+	1044	3	FSM	ENSMUSG00000039771.14	ENSMUST00000111127.8	900	3	72	-216	1	3	multi-exon	FALSE	canonical	3	1103	junction_2	0.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGGGCTGTGCAGTGT	9284	False	NA	22	True	AATAAA	-11	NA	136145556	136151793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136145660_136148848_136148939_136150942
ES.27459.5	chr5	+	622	5	NNC	ENSMUSG00000039771.14	novel	646	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	594.121357552478	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9285	False	NA	30	True	AATAAA	-19	NA	136145557	136151801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136145660_136148577_136148627_136148848_136148939_136150942_136151118_136151595
ES.27459.6	chr5	+	716	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	88	-158	17	158	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAAGCCCTCTCCCATT	9300	False	NA	NA	False	AATAAA	-13	NA	136145572	136151959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ES.27459.7	chr5	+	3210	2	ISM	ENSMUSG00000039771.14	ENSMUST00000111129.2	474	3	2554	-7	2554	-4	3prime_fragment	FALSE	canonical	3	1268	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGTGCAGTGTGTGG	NA	False	NA	26	True	AATAAA	-15	NA	136148109	136151797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_136151118_136151595
ES.2746.1	chr10	-	4060	3	Antisense	novelGene_ENSMUSG00000038822.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCTACCTTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	45580249	45562068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_45562829_45576671_45576770_45577047
ES.27460.1	chr5	+	2298	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	-525	0	-517	0	multi-exon	FALSE	canonical	3	62	junction_2	0.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTCTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	136164482	136170466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136165149_136168191_136168390_136169032
ES.27460.2	chr5	+	1875	3	NNC	ENSMUSG00000039754.11	novel	1040	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAATTTCTCCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	136165011	136170464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136165254_136168191_136168390_136169029
ES.27460.3	chr5	+	1643	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	14	-1100	2	0	multi-exon	FALSE	canonical	3	9	junction_1	26.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTCTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	136165013	136170466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136165149_136168315_136168390_136169032
ES.27460.4	chr5	+	1674	3	NNC	ENSMUSG00000039754.11	novel	1773	3	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	29.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGAATTTCTCCTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	136165014	136170465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136165149_136168282_136168390_136169032
ES.27460.5	chr5	+	5440	1	NIC	ENSMUSG00000039754.11	novel	1773	3	NA	NA	10	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAATGAATTTCTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	136165021	136170461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136165000_136170500
ES.27461.1	chr5	-	4381	3	ISM	ENSMUSG00000105349.2_ENSMUSG00000029703.11	ENSMUST00000142272.2	2200	4	1917	-3987	1917	1878	3prime_fragment	FALSE	canonical	3	389	junction_2	7	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTGATGGCCTCC	9568	False	NA	NA	False	AATAAA	-19	NA	136152496	136147941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_136152170_136152256_136152367_136152453
ES.27461.10	chr5	-	2716	14	NIC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	342	junction_9	22.744529220616	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGGGAAATGAGTGT	6696	False	NA	-10	True	ATTAAA	-20	NA	136164916	136151919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.12	chr5	-	3502	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	131.833073178446	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6751	False	NA	-11	True	ATTAAA	-19	NA	136164861	136151920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136157588_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161254_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.14	chr5	-	2152	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.639768718469	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAGTGGGAAATGAGT	6691	False	NA	-12	True	ATTAAA	-18	NA	136164921	136151921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162282_136162787_136162905_136163352_136163588_136164725
ES.27461.15	chr5	-	2661	14	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_5	99.7638632089138	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAGTGGGAAATGAGT	6684	False	NA	-12	True	ATTAAA	-18	NA	136164928	136151921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159212_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162905_136163352_136163588_136164725
ES.27461.16	chr5	-	3135	13	FSM	ENSMUSG00000029703.11	ENSMUST00000132976.8	3139	13	1	3	1	-3	multi-exon	FALSE	canonical	3	342	junction_8	19.3512847692917	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCCAGTGGGAAATGA	6758	False	NA	-14	True	ATTAAA	-16	NA	136164854	136151923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161934_136162158_136162905_136163352_136163588_136164725
ES.27461.17	chr5	-	2044	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	96.9069614819981	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGGCCAGTGGGAAAT	6777	False	NA	-16	True	ATTAAA	-14	NA	136164835	136151925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161045_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.18	chr5	-	1855	8	NIC	ENSMUSG00000029703.11	novel	3139	13	NA	NA	1515	3	intron_retention	FALSE	canonical	3	342	junction_6	20.2252620376052	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGGCCAGTGGGAAAT	1	True	NA	-16	True	ATTAAA	-14	NA	136161216	136151925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136152170_136152256_136152367_136152453_136152813_136159074_136159216_136159316_136160036_136160306_136160417_136160965_136161081_136161159
ES.27461.19	chr5	-	1628	13	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	497	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.260967089525	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGGCCAGTGGGAA	9378	False	NA	-18	True	ATTAAA	-12	NA	136162234	136151927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161670_136161748_136161828_136161934_136162158
ES.27461.2	chr5	-	3704	2	Fusion	ENSMUSG00000105349.2_ENSMUSG00000029703.11	novel	3139	13	NA	NA	-1401	1876	intron_retention	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCCCTGTGATGGCCT	9513	False	NA	NA	False	AATAAA	-17	NA	136151925	136147943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_136149375_136149652
ES.27461.20	chr5	-	6342	11	FSM	ENSMUSG00000029703.11	ENSMUST00000148475.8	2339	11	-28	-3975	12	-1734	multi-exon	FALSE	canonical	3	342	junction_4	23.993540797473	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGACTAGCTCATAACT	6708	False	NA	NA	False	NA	NA	NA	136164904	136154279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.3	chr5	-	2165	1	FSM	ENSMUSG00000105349.2	ENSMUST00000199799.2	705	1	-1458	-2	-1458	2	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAATTTAC	9456	False	NA	NA	False	ATTAAA	-17	NA	136151982	136149817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136149800_136152000
ES.27461.4	chr5	-	3437	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	94	-1058	17	1058	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGGGATGTAGCTCAG	6778	False	NA	NA	False	NA	NA	NA	136164834	136150567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.5	chr5	-	3555	14	NIC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	10	1057	intron_retention	FALSE	canonical	3	342	junction_7	23.7260000194529	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGGGATGTAGCTCA	6746	False	NA	NA	False	NA	NA	NA	136164866	136150568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136152170_136152256_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.6	chr5	-	2229	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	-6	250	-6	45	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTTGGTTAACTCAGG	6678	False	NA	34	True	NA	NA	NA	136164934	136151875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.7	chr5	-	2037	14	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.244316930802	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGTAGTCACACAG	6696	False	NA	0	True	ATTAAA	-30	NA	136164916	136151909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152173_136152486_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27461.8	chr5	-	6419	4	FSM	ENSMUSG00000029703.11	ENSMUST00000142272.2	2200	4	-4200	-19	491	11	multi-exon	FALSE	canonical	3	374	junction_3	11.8415464455544	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGTAGTCACACAG	7485	False	NA	0	True	ATTAAA	-30	NA	136158613	136151909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720
ES.27461.9	chr5	-	2211	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	-2	11	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	96.2418562682536	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGTAGTCACACAG	6682	False	NA	0	True	ATTAAA	-30	NA	136164930	136151909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136152170_136152256_136152387_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ES.27462.1	chr5	-	3890	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	21	-3	21	3	multi-exon	FALSE	canonical	0	0	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCTTGAGAAGTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	136199546	136176309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136179807_136190340_136190579_136199391
ES.27462.2	chr5	-	3679	3	NNC	ENSMUSG00000039747.12	novel	3908	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTCTTGAGAAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	136199489	136176312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136179807_136190340_136190428_136199391
ES.27462.3	chr5	-	3110	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	58	740	-21	-735	multi-exon	FALSE	canonical	0	0	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTGAGTCCACTCCT	NA	False	NA	NA	False	NA	NA	NA	136199509	136177052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136179807_136190340_136190579_136199391
ES.27462.4	chr5	-	2729	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	56	1123	-23	-1118	multi-exon	FALSE	canonical	0	0	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATTTACTGTGAGC	NA	False	NA	NA	False	AGTAAA	-10	NA	136199511	136177435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136179807_136190340_136190579_136199391
ES.27462.5	chr5	-	787	1	Intergenic	novelGene_22883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAAACCAAACAACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	136181016	136180229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136180200_136181000
ES.27463.1	chr5	-	3867	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	29	-3	-24	3	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGTTAGTGTTTGAT	NA	False	NA	0	True	NA	NA	NA	136227788	136206977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ES.27463.10	chr5	-	4286	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	-24	-3	intron_retention	FALSE	canonical	3	446	junction_2	41.3967088063773	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGGTCTTGTCCACACGT	NA	False	NA	-16	True	AGTAAA	-13	NA	136227788	136209940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136226713_136227628
ES.27463.2	chr5	-	1548	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	-24	727	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	235.670718376297	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACTGAGTTTACGCCC	NA	False	NA	NA	False	CATAAA	-13	NA	136227788	136209210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136210351_136218405_136218474_136223150_136223252_136226633_136226713_136227628
ES.27463.3	chr5	-	1557	7	NNC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	-12	727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.50969774275	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACTGAGTTTACGCCC	NA	False	NA	NA	False	CATAAA	-13	NA	136227776	136209210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136209392_136209456_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ES.27463.4	chr5	-	1619	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	42	2232	-11	725	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGACTGAGTTTACGC	NA	False	NA	NA	False	CATAAA	-11	NA	136227775	136209212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ES.27463.5	chr5	-	1513	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	25	681	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	221.846089665786	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTTTTGTGGGTTTTTT	NA	False	NA	NA	False	AATATA	-6	NA	136227792	136209256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136227628
ES.27463.6	chr5	-	950	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	-3	2946	-3	11	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCGAGATGTTGATT	NA	False	NA	-2	True	AGTAAA	-27	NA	136227820	136209926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ES.27463.7	chr5	-	781	6	NNC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	-15	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.095679545385	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCGAGATGTTGATT	NA	False	NA	-2	True	AGTAAA	-27	NA	136227779	136209926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136210249_136218431_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ES.27463.8	chr5	-	3196	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	20	0	intron_retention	FALSE	canonical	3	535	junction_2	13.3860935302276	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTCCACACGTGCG	NA	False	NA	-13	True	AGTAAA	-16	NA	136227797	136209937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136210351_136218405_136220840_136223150_136223252_136226633_136226713_136227628
ES.27464.1	chr5	+	4991	2	Intergenic	novelGene_22884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	136227897	136237392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136227948_136232451
ES.27465.1	chr5	-	2860	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	-13	1	-13	-1	multi-exon	TRUE	canonical	1	1	junction_1	2.73861278752583	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCTGCTCTCCTGTGGT	2489	False	NA	NA	False	ATTAAA	-19	NA	136273770	136247003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
ES.27466.1	chr5	+	223	1	Intergenic	novelGene_22885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCACCATGTGGTTGCT	NA	False	NA	NA	False	AAAAAG	-25	NA	136292990	136293213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136293000_136293200
ES.27467.1	chr5	+	9337	1	Intergenic	novelGene_22886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGTGCCATGGTACAT	NA	False	NA	NA	False	NA	NA	NA	136321122	136330459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136321100_136330500
ES.27468.1	chr5	+	1732	1	Intergenic	novelGene_22888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	136372322	136374054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136372300_136374100
ES.27469.1	chr5	+	4254	1	Intergenic	novelGene_22891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	136439893	136444147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136439900_136444100
ES.2747.1	chr10	+	177	1	Intergenic	novelGene_2091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	45680526	45680703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45680500_45680700
ES.27470.1	chr5	+	2489	1	Intergenic	novelGene_22892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-39	NA	136492431	136494920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136492400_136494900
ES.27471.1	chr5	+	142	1	Intergenic	novelGene_22893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	136536722	136536864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136536700_136536900
ES.27472.1	chr5	+	2104	1	Intergenic	novelGene_22894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136537484	136539588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136537500_136539600
ES.27473.1	chr5	+	5656	1	Intergenic	novelGene_22896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCACCCAGGCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	136586545	136592201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136586500_136592200
ES.27473.2	chr5	+	4376	1	Intergenic	novelGene_22897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATGTATGCCTTCTT	NA	False	NA	NA	False	CATAAA	-37	NA	136586547	136590923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136586500_136590900
ES.27474.1	chr5	-	3067	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	1	-237	0	237	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTTGGATCTCAGTA	NA	False	NA	NA	False	AATATA	-16	NA	136596117	136276751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.10	chr5	-	3230	23	NIC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-96	-1	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596440	136276989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.12	chr5	-	3016	24	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	24.8734414735324	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGGTCTTTTATTCTG	NA	False	NA	-3	True	AATAAA	-16	NA	136596380	136276990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031_136596270_136596344
ES.27474.13	chr5	-	2958	22	NIC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	29.0936403582819	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGGTCTTTTATTCTG	NA	False	NA	-3	True	AATAAA	-16	NA	136596358	136276990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.14	chr5	-	2825	22	NIC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	28.5248032261919	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGGGTCTTTTATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	136596157	136276991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136514594_136514706_136596031
ES.27474.16	chr5	-	2895	24	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	30.2805408326716	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGGGGTCTTTTATTCT	NA	False	NA	-4	True	AATAAA	-15	NA	136596118	136276991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136511967_136512035_136514594_136514706_136596031
ES.27474.18	chr5	-	2905	21	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	25.8937733828038	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGGGGTCTTTTATTC	NA	False	NA	-5	True	AATAAA	-14	NA	136596315	136276992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136514586_136514706_136596031
ES.27474.19	chr5	-	3331	23	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-97	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	29.8713840786941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGTCTTTTATT	NA	False	NA	-6	True	AATAAA	-13	NA	136596441	136276993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514490_136514706_136596031
ES.27474.2	chr5	-	3172	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	-329	-12	-103	12	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTCCTCAGCTG	NA	False	NA	11	True	AATAAA	-30	NA	136596447	136276976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.20	chr5	-	4388	1	ISM	ENSMUSG00000029705.18	ENSMUST00000004097.16	12862	24	296640	3	31716	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACAAGCGCGTGTGGGC	2867	False	NA	-8	True	AGTAAA	-13	NA	136299659	136295271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_136295300_136299700
ES.27474.21	chr5	-	6603	23	NNC	ENSMUSG00000029705.18	novel	10945	23	NA	NA	-15	1337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	50.4535626439905	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTACTTTTTTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	136596359	136301586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136304321_136308283_136308549_136311721_136311911_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392192_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.22	chr5	-	6695	24	NIC	ENSMUSG00000029705.18	novel	12862	24	NA	NA	-2	1305	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	49.7200100068882	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATTATTTCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	136596104	136301618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.23	chr5	-	6647	24	NIC	ENSMUSG00000029705.18	novel	4882	24	NA	NA	-20	1075	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.5465496798929	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATTTTTTTTTGCTTA	NA	False	NA	NA	False	AATAGA	-16	NA	136596364	136301848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.24	chr5	-	6423	24	NIC	ENSMUSG00000029705.18	novel	12862	24	NA	NA	-36	829	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	49.0798893514682	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGATTCCTCCCGTTG	NA	False	NA	NA	False	NA	NA	NA	136596380	136302094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.25	chr5	-	4720	9	ISM	ENSMUSG00000029705.18	ENSMUST00000175975.9	10945	23	254026	4876	-10699	827	3prime_fragment	FALSE	canonical	1	1	junction_8	5.22015325445528	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTGATTCCTCCCGT	NA	False	NA	NA	False	NA	NA	NA	136342074	136302096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136341496
ES.27474.26	chr5	-	5276	23	NIC	ENSMUSG00000029705.18	novel	10945	23	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	49.5156081912103	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACATCAGGAAAAGTATC	NA	False	NA	NA	False	NA	NA	NA	136596118	136302913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.27	chr5	-	5690	24	NIC	ENSMUSG00000029705.18	novel	4882	24	NA	NA	-128	10	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.5465496798929	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACATCAGGAAAAGTATC	NA	False	NA	NA	False	NA	NA	NA	136596472	136302913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.29	chr5	-	5284	24	NIC	ENSMUSG00000029705.18	novel	12862	24	NA	NA	-25	-159	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	49.7200100068882	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTCAGTTGCCACTA	NA	False	NA	NA	False	ATTAAA	-16	NA	136596157	136303082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.3	chr5	-	4049	23	NIC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	-327	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	27.7704581724436	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136595532	136276988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136594233
ES.27474.30	chr5	-	5211	24	NIC	ENSMUSG00000029705.18	novel	4882	24	NA	NA	-30	-159	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.5465496798929	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTCAGTTGCCACTA	NA	False	NA	NA	False	ATTAAA	-16	NA	136596162	136303082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.31	chr5	-	5004	23	FSM	ENSMUSG00000029705.18	ENSMUST00000175975.9	10945	23	0	5941	0	147	multi-exon	FALSE	canonical	1	1	junction_8	48.8855342053808	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCGATAATACACTATTAT	NA	False	NA	NA	False	ATTAAA	-34	NA	136596100	136303161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.32	chr5	-	5166	24	NIC	ENSMUSG00000029705.18	novel	4882	24	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	48.5465496798929	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTGTACCCTGAAGT	NA	False	NA	NA	False	AAGAAA	-19	NA	136596379	136303344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.33	chr5	-	2500	1	Intergenic	novelGene_22887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	136326898	136324398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136324400_136326900
ES.27474.34	chr5	-	3588	11	ISM	ENSMUSG00000029705.18	ENSMUST00000175975.9	10945	23	-66	55911	-34	-11044	5prime_fragment	FALSE	canonical	3	74	junction_1	14.4830935921853	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGATGGCTCTGATACA	NA	False	NA	NA	False	NA	NA	NA	136596166	136353131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.35	chr5	-	6622	1	NIC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	305	-4127	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGCTGGAATTTGAATAA	NA	False	NA	NA	False	NA	NA	NA	136401897	136395275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136395300_136401900
ES.27474.36	chr5	-	167	1	Intergenic	novelGene_22889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATATAGTAC	NA	False	NA	NA	False	NA	NA	NA	136408550	136408383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136408400_136408600
ES.27474.37	chr5	-	1514	1	Intergenic	novelGene_22890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAGGAAAAGGA	4225	False	NA	NA	False	NA	NA	NA	136427975	136426461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136426500_136428000
ES.27474.38	chr5	-	177	1	Intergenic	novelGene_22895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGAGCAAGCAGGGAC	7148	False	NA	NA	False	NA	NA	NA	136542449	136542272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136542300_136542400
ES.27474.39	chr5	-	4957	1	NIC	ENSMUSG00000029705.18	novel	3290	2	NA	NA	-16	-79630	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGAGACTTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	136596315	136591358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136591400_136596300
ES.27474.4	chr5	-	3107	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	-286	0	-44	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596388	136276988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.5	chr5	-	3183	23	NNC	ENSMUSG00000029705.18	novel	2821	23	NA	NA	-25	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	37.9904294167982	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596369	136276989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136363297_136363442_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136514594_136514706_136596031
ES.27474.6	chr5	-	3071	23	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	25.130896988987	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596366	136276989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361576_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27474.8	chr5	-	1823	12	NNC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	32.6033005478214	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGTCTTTTATTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	136596117	136276989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136277835_136278021_136278087_136279377_136279529_136368959_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ES.27475.1	chr5	-	179	1	Intergenic	novelGene_22898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	136636832	136636653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136636700_136636800
ES.27476.1	chr5	-	94	1	Intergenic	novelGene_22899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	136677702	136677608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136677600_136677700
ES.27477.1	chr5	+	204	1	Intergenic	novelGene_22900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTATTAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	136679359	136679563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136679400_136679600
ES.27478.1	chr5	-	155	1	Intergenic	novelGene_22901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGTCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	136759406	136759251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136759300_136759400
ES.27479.1	chr5	+	751	4	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0.816496580927726	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGACTCATACACTCT	NA	False	NA	NA	False	AATGAA	-20	NA	136766555	136778315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_136766691_136774222_136774384_136777293_136777375_136777941
ES.27479.2	chr5	+	1880	3	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	1	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATCTTGGCCATGGTA	NA	False	NA	NA	False	NA	NA	NA	136766571	136778893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_136766691_136774222_136774384_136777293
ES.27479.3	chr5	+	1323	3	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	1	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCATACTCCAATCTC	NA	False	NA	NA	False	CATAAA	-17	NA	136766571	136778336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_136766691_136774222_136774384_136777293
ES.27479.4	chr5	+	1307	4	Antisense	novelGene_ENSMUSG00000004415.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0.816496580927726	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATCTTGGCCATGGTA	NA	False	NA	NA	False	NA	NA	NA	136766577	136778893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_136766691_136774222_136774384_136777293_136777375_136777941
ES.2748.1	chr10	+	804	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	-15	-7	-1	7	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACACAAAATGACATTGT	NA	False	NA	NA	False	AATAAA	-41	NA	45751385	45752189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_45751400_45752200
ES.27480.1	chr5	+	356	1	Intergenic	novelGene_22903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	136787343	136787699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136787300_136787700
ES.27480.2	chr5	+	251	1	Intergenic	novelGene_22902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136787343	136787594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136787300_136787600
ES.27481.1	chr5	-	2298	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9732	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.6068477092082	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTGTGGCTTGTCAG	907	False	NA	0	True	AATAAA	-19	NA	136811632	136770612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811559
ES.27481.2	chr5	-	2372	11	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9702	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_10	9.19565114605812	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTGTGGCTTGTCAG	937	False	NA	0	True	AATAAA	-19	NA	136811602	136770612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136811455
ES.27481.3	chr5	-	3054	8	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-582	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.7181813353134	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTCTGTGGCTTGTC	NA	False	NA	-2	True	AATAAA	-17	NA	136784828	136770614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777303_136778118_136778172_136780522_136780607_136783046_136783200_136783768
ES.27481.4	chr5	-	2043	7	NIC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	302	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.6332999331662	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTTTCTGTGGCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	136783944	136770616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136772061_136773016_136773102_136775874_136775923_136778118_136778172_136780522_136780607_136783046_136783200_136783768
ES.27481.5	chr5	-	3330	7	NIC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	305	-5	intron_retention	FALSE	canonical	3	37	junction_3	3.23608130649127	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTCTTTCTGTGGCTT	NA	False	NA	-5	True	AATAAA	-14	NA	136783941	136770617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_136772061_136773016_136773102_136775874_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768
ES.27481.6	chr5	-	4983	10	NNC	ENSMUSG00000004415.16	novel	2724	13	NA	NA	-9701	-6	intron_retention	FALSE	canonical	3	20	junction_9	9.39398283904367	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGTCTTTCTGTGGCT	938	False	NA	-6	True	AATAAA	-13	NA	136811601	136770618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136786643_136794155_136794218_136811455
ES.27482.1	chr5	+	181	1	Intergenic	novelGene_22904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACACCCATACATAC	2760	False	NA	NA	False	NA	NA	NA	136922368	136922549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136922400_136922500
ES.27483.1	chr5	+	173	1	Intergenic	novelGene_22905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAATAAAAA	6952	False	NA	NA	False	NA	NA	NA	136926560	136926733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136926600_136926700
ES.27484.1	chr5	+	906	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	4	2161	4	62	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTAGCACTGTGTTTT	4059	False	NA	5	True	NA	NA	NA	136937007	136942097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
ES.27484.2	chr5	+	2966	6	NNC	ENSMUSG00000007987.13	novel	3071	5	NA	NA	16	-30	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	28.8610464120759	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAATAAGT	4071	False	NA	NA	False	NA	NA	NA	136937019	136944228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678_136944072_136944130
ES.27484.3	chr5	+	487	4	FSM	ENSMUSG00000007987.13	ENSMUST00000200153.5	670	4	-35	218	17	-218	multi-exon	FALSE	canonical	3	69	junction_3	7.34846922834953	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTCTCCTGCTTTTT	4072	False	NA	NA	False	NA	NA	NA	136937020	136940758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542
ES.27485.1	chr5	+	3986	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	-12	-7	-12	1	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGCTTTTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-20	NA	136947987	136965967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
ES.27485.2	chr5	+	627	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	-1	-9	-1	9	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGTCTACTTATACC	NA	False	NA	NA	False	NA	NA	NA	136948204	136962548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
ES.27485.3	chr5	+	3875	5	NNC	ENSMUSG00000097908.8	novel	4058	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.0800460593383	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGCTTTTTTGTTTTG	NA	False	NA	30	True	AATAAA	-19	NA	136948208	136965966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315_136962427_136962592
ES.27485.4	chr5	+	3856	5	NNC	ENSMUSG00000097908.8	novel	4058	5	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.889017923921	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTCGCTTTTTTGT	NA	False	NA	26	True	AATAAA	-15	NA	136948218	136965962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136949518_136949625_136951160_136951282_136954557_136954750_136962592
ES.27485.5	chr5	+	3901	5	NNC	ENSMUSG00000097908.8	novel	4058	5	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.2069910076887	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTCGCTTTTTTGTTT	NA	False	NA	28	True	AATAAA	-17	NA	136948219	136965964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136951160_136951282_136954557_136954750_136959237_136959388_136962592
ES.27485.6	chr5	+	3783	5	NNC	ENSMUSG00000097908.8	novel	3967	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5386667441729	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCAGCCTCGCTTTTTT	NA	False	NA	24	True	AATAAA	-13	NA	136948247	136965960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136948474_136948539_136951160_136951282_136954557_136954750_136962592
ES.27485.7	chr5	+	607	5	NNC	ENSMUSG00000097908.8	novel	617	4	NA	NA	-5	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.5353080194748	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATGA	NA	False	NA	NA	False	NA	NA	NA	136948249	136962512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136948477_136948539_136951160_136951282_136954557_136954750_136962315
ES.27485.8	chr5	+	3800	5	NNC	ENSMUSG00000097908.8	novel	4058	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.2809846392341	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGCTTTTTTGTTTTG	NA	False	NA	30	True	AATAAA	-19	NA	136948259	136965966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136948286_136948451_136948539_136951160_136951282_136954557_136954750_136962592
ES.27486.1	chr5	+	4108	1	Intergenic	novelGene_22906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTTGAACAACTTT	2031	False	NA	NA	False	AATAAA	-15	NA	136969966	136974074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136970000_136974100
ES.27486.2	chr5	+	968	2	Intergenic	novelGene_22907	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTTGAACAACTTT	2034	False	NA	NA	False	AATAAA	-15	NA	136969969	136974074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136970322_136973458
ES.27487.1	chr5	+	2932	1	Intergenic	novelGene_22908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGGTTGTCCTGAGCGT	2015	False	NA	NA	False	NA	NA	NA	136975935	136978867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136975900_136978900
ES.27487.2	chr5	+	159	1	Intergenic	novelGene_22910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	77	False	NA	NA	False	NA	NA	NA	136978154	136978313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136978200_136978300
ES.27488.1	chr5	-	2895	3	Intergenic	novelGene_22909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCACAAGCTGCATCCC	6947	False	NA	NA	False	NA	NA	NA	136980914	136977498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136978151_136978356_136978610_136978924
ES.27489.1	chr5	+	971	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	4028	False	NA	18	True	AATAAA	-19	NA	136982105	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ES.27489.10	chr5	+	1407	6	NIC	ENSMUSG00000019054.14	novel	786	5	NA	NA	-437	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	251.238213653895	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCTGTGTGTGAGCGA	2831	False	NA	17	True	AATAAA	-18	NA	136990493	136995085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_136991083_136991852_136991986_136993062_136993250_136993946_136994024_136994418_136994525_136994770
ES.27489.11	chr5	+	777	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	10	-1	10	1	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGAGCGAGCAT	3278	False	NA	21	True	AATAAA	-22	NA	136990940	136995089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ES.27489.13	chr5	+	2933	2	ISM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	9499	-83	60	0	intron_retention	FALSE	canonical	3	544	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	4096	False	NA	18	True	AATAAA	-19	NA	136991758	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_136994024_136994418
ES.27489.14	chr5	+	384	2	NNC	ENSMUSG00000019054.14	novel	948	5	NA	NA	2751	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	6787	False	NA	18	True	AATAAA	-19	NA	136994449	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136994525_136994777
ES.27489.2	chr5	+	829	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-145	-83	-14	0	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	4037	False	NA	18	True	AATAAA	-19	NA	136982114	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
ES.27489.4	chr5	+	1007	5	NNC	ENSMUSG00000019054.14	novel	948	5	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.129466256274	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCTGTGTGTGAGCGA	4058	False	NA	17	True	AATAAA	-18	NA	136982135	136995085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136982445_136993049_136993250_136993946_136994024_136994418_136994525_136994770
ES.27489.5	chr5	+	3445	1	Intergenic	novelGene_22912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTTAGTTTTGTTT	5100	False	NA	NA	False	NA	NA	NA	136983177	136986622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136983200_136986600
ES.27489.6	chr5	+	9320	3	ISM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	2863	-80	2863	-3	3prime_fragment	FALSE	canonical	3	544	junction_1	12	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGCTCTGTGTGTGAGC	7045	False	NA	15	True	AATAAA	-16	NA	136985122	136995083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_136994024_136994418_136994525_136994770
ES.27489.7	chr5	+	4139	5	NNC	ENSMUSG00000019054.14	novel	786	5	NA	NA	-3303	0	intron_retention	FALSE	non_canonical	0	0	junction_1	234.909956153416	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	14	True	NA	18	True	AATAAA	-19	NA	136987627	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_136988758_136989475_136991986_136993946_136994024_136994418_136994525_136994770
ES.27489.8	chr5	+	158	1	Intergenic	novelGene_22913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAAAAATTA	1042	False	NA	NA	False	NA	NA	NA	136988704	136988862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_136988700_136988900
ES.27489.9	chr5	+	3163	4	FSM	ENSMUSG00000019054.14	ENSMUST00000152658.2	565	4	-2377	-221	-1609	0	multi-exon	FALSE	canonical	3	509	junction_1	24.2257897474755	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	1659	False	NA	18	True	AATAAA	-19	NA	136989321	136995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_136991986_136993946_136994024_136994418_136994525_136994770
ES.2749.1	chr10	+	153	1	Intergenic	novelGene_2092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45822872	45823025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45822900_45823000
ES.27490.1	chr5	-	6166	1	Intergenic	novelGene_22911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	136988679	136982513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_136982500_136988700
ES.27491.1	chr5	+	4822	16	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-54	-104	intron_retention	FALSE	canonical	1	1	junction_11	46.6373241084863	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCGTGAGTCCAATATA	NA	False	NA	18	True	AATAAA	-19	NA	137015818	137025398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019394_137019598_137019704_137019812_137019939_137020184_137020296_137020397_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.10	chr5	+	2793	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-106	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.0605683834917	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTATTTGTGAGTG	NA	False	NA	118	True	ATTAAA	-20	NA	137016125	137025498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137016229_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.11	chr5	+	2682	20	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-98	-107	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.0605683834917	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTCCGTGAGTCCAAT	NA	False	NA	15	True	AATAAA	-16	NA	137016133	137025395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137016229_137016458_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.12	chr5	+	3111	18	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-92	-103	intron_retention	FALSE	canonical	3	142	junction_1	18.8994791308831	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCGTGAGTCCAATATAA	NA	False	NA	19	True	AATAAA	-20	NA	137016139	137025399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.13	chr5	+	2910	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	267	103	-92	-103	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCGTGAGTCCAATATAA	NA	False	NA	19	True	AATAAA	-20	NA	137016139	137025399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.14	chr5	+	3981	16	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	22	-109	intron_retention	FALSE	canonical	3	142	junction_1	19.530033851026	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTCCGTGAGTCCA	NA	False	NA	13	True	AATAAA	-14	NA	137016253	137025393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137020296_137020397_137020512_137020625_137020695_137022062_137023144_137023786_137023913_137024959
ES.27491.15	chr5	+	3645	18	ISM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	575	107	118	-107	intron_retention	FALSE	canonical	3	142	junction_1	18.8994791308831	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTCCGTGAGTCCAAT	NA	False	NA	15	True	AATAAA	-16	NA	137016447	137025395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786
ES.27491.17	chr5	+	2457	17	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	861	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.4774603896221	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137017190	137025391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137017326_137017425_137017556_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020184_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022764_137023144_137023786_137023913_137024959
ES.27491.2	chr5	+	3284	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	-4	0	-4	0	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGAGTGTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	137015868	137025502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.3	chr5	+	3158	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	21	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	44.3185717557452	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137015893	137025391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019141_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.4	chr5	+	4859	16	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	26	-111	intron_retention	FALSE	canonical	3	142	junction_1	18.3492052507277	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137015898	137025391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017850_137017979_137018044_137018451_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.5	chr5	+	3292	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	56	-111	intron_retention	FALSE	canonical	0	0	junction_4	75.6350888587213	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137015928	137025391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017556_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019394_137019598_137019704_137019816_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022764_137022841_137022996_137023144_137023786_137023913_137024959
ES.27491.6	chr5	+	4320	17	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	62	-112	intron_retention	FALSE	canonical	0	0	junction_4	47.1007895369069	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTGAGTCCGTGAGT	NA	False	NA	10	True	AATAAA	-11	NA	137015934	137025390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017556_137017736_137017850_137017979_137018044_137018451_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786
ES.27491.7	chr5	+	4664	17	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	164	-111	intron_retention	FALSE	canonical	1	1	junction_12	46.8250984382308	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGTCCGTGAGTC	NA	False	NA	11	True	AATAAA	-12	NA	137016036	137025391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020184_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996
ES.27491.8	chr5	+	2897	19	NIC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-120	-113	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	44.4512494790294	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCATTGAGTCCGTGAG	NA	False	NA	9	True	AATAAA	-10	NA	137016111	137025389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020184_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27491.9	chr5	+	2905	19	NNC	ENSMUSG00000004846.11	novel	3280	19	NA	NA	-118	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.4044611817271	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGAGTCCGTGAGTCC	NA	False	NA	12	True	AATAAA	-13	NA	137016113	137025392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137016658_137016970_137017063_137017188_137017326_137017449_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ES.27492.1	chr5	+	697	2	NNC	ENSMUSG00000087244.2	novel	944	6	NA	NA	1292	268	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTTTTGTGTTTGGGG	2205	False	NA	NA	False	NA	NA	NA	137027531	137028416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137027818_137028005
ES.27493.1	chr5	-	5135	2	ISM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	35	-102	0	0	intron_retention	FALSE	canonical	3	309	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016362	137011047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137011542_137011721
ES.27493.2	chr5	-	3203	3	ISM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	36	-102	1	0	intron_retention	FALSE	canonical	3	303	junction_2	3	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016361	137011047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137011542_137011721_137011802_137013732
ES.27493.3	chr5	-	999	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	177	32	177	-2	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137016698	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
ES.27493.4	chr5	-	1426	4	FSM	ENSMUSG00000059518.15	ENSMUST00000034953.14	764	4	-664	2	15	-2	multi-exon	FALSE	canonical	3	69	junction_3	111.749720357592	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137016347	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137015664
ES.27493.5	chr5	-	747	6	NNC	ENSMUSG00000059518.15	novel	1208	5	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	151.597625311217	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137016371	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137014027_137014103_137016342
ES.27493.6	chr5	-	731	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	3	6	3	-2	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137015752	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
ES.27493.7	chr5	-	2610	4	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	-115	6	-115	-2	intron_retention	FALSE	canonical	3	303	junction_3	5.31245915016974	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137015870	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732
ES.27493.8	chr5	-	798	4	FSM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	0	-100	0	-2	multi-exon	FALSE	canonical	0	0	junction_3	144.270579121316	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	False	NA	0	True	AATAAA	-16	NA	137016397	137011049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137016342
ES.27494.1	chr5	-	2875	1	Antisense	novelGene_ENSMUSG00000087244.2_AS_novelGene_ENSMUSG00000004846.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCATGTGTATTTGT	4071	False	NA	NA	False	AATAAA	-25	NA	137028355	137025480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_137025500_137028400
ES.27495.1	chr5	+	216	1	Intergenic	novelGene_22914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCAAACCTTCGCCGTC	3540	False	NA	NA	False	NA	NA	NA	137028866	137029082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137028900_137029100
ES.27496.1	chr5	+	2820	4	NNC	ENSMUSG00000037428.15	novel	2834	5	NA	NA	-1040	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTCCGTTATTCA	8045	False	NA	NA	False	AATAAA	-19	NA	137054205	137062204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137054346_137055223_137055317_137059113_137059316_137059819
ES.27497.1	chr5	-	1329	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	25	-1	25	1	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTTGGCTTTGTTGGA	NA	False	NA	2	True	AATAAA	-26	NA	137074964	137063845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ES.27497.10	chr5	-	1106	3	ISM	ENSMUSG00000004849.15	ENSMUST00000144303.2	483	4	0	3590	0	2083	5prime_fragment	FALSE	canonical	3	639	junction_2	68.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	137074896	137069839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137070732_137071917_137072097_137074861
ES.27497.11	chr5	-	2296	2	NIC	ENSMUSG00000004849.15	novel	483	4	NA	NA	-4	2083	intron_retention	FALSE	canonical	3	639	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	137074900	137069839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137072097_137074861
ES.27497.3	chr5	-	988	6	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.283410833277	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTGCCTTGGCTTTG	NA	False	NA	-3	True	AATAAA	-21	NA	137074945	137063850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137064102_137064418_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ES.27497.4	chr5	-	1506	5	NIC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	325.683895825385	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGACTTTGCCTTGGCTT	NA	False	NA	-5	True	AATAAA	-19	NA	137074653	137063852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074366
ES.27497.5	chr5	-	1911	6	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	16	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	375.55377777357	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGACTTTGCCTTGGCTT	NA	False	NA	-5	True	AATAAA	-19	NA	137074880	137063852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137073833_137074507_137074861
ES.27497.6	chr5	-	1672	6	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	-104	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	372.896554020012	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGACTTTGCCTTGGCT	NA	False	NA	-6	True	AATAAA	-18	NA	137074753	137063853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137072199_137072267_137074366
ES.27497.7	chr5	-	2247	6	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	101	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	372.896554020012	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGACTTTGCCTTGGCT	NA	False	NA	-6	True	AATAAA	-18	NA	137074795	137063853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137072199_137072267_137073833
ES.27497.8	chr5	-	205	2	NNC	ENSMUSG00000004849.15	novel	1353	5	NA	NA	2376	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTGACTTTGCCTT	8141	False	NA	-10	True	AATAAA	-14	NA	137064128	137063857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137063959_137064024
ES.27497.9	chr5	-	894	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	93	366	0	-17	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGTTTCCAGGGCTCT	NA	False	NA	NA	False	TATAAA	-17	NA	137074896	137064212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ES.27498.1	chr5	-	3672	1	ISM	ENSMUSG00000043279.10	ENSMUST00000054384.6	9279	3	6890	2	6890	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTCTTGTGTACCTAG	8591	False	NA	NA	False	AATAAA	-25	NA	137138171	137134499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137134500_137138200
ES.27499.1	chr5	-	1673	4	ISM	ENSMUSG00000094840.6	ENSMUST00000196391.5	1877	6	1266	0	1266	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGCTGCTCTCTCGT	NA	False	NA	NA	False	AATAAA	-13	NA	137245345	137243269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137244587_137244722_137244776_137244960_137245053_137245134
ES.275.1	chr1	-	4683	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	52	junction_19	36.1657296345587	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTCAGCTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-22	NA	36408262	36374809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.11	chr1	-	4671	21	FSM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	-8	0	-8	0	multi-exon	FALSE	canonical	3	87	junction_19	30.7481300244421	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408270	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.12	chr1	-	3766	19	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.6564858590534	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408216	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376322_36383166_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406849_36407116_36408185
ES.275.13	chr1	-	4594	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_19	43.3662022778108	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408260	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406849_36407116_36408185
ES.275.14	chr1	-	4554	20	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	59.0931936873123	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36407122	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397556_36404562_36404734_36406849
ES.275.15	chr1	-	4576	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	48.9779542243242	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408209	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.17	chr1	-	4652	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.8954688352031	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408215	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387895_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397556_36404562_36404734_36406830_36407116_36408185
ES.275.18	chr1	-	3847	19	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.5062013251447	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408211	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376322_36383166_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.2	chr1	-	4642	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	2	1	combination_of_known_junctions	TRUE	canonical	3	15	junction_19	42.6348155853875	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTCAGCTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-22	NA	36408260	36374809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406849_36407116_36408185
ES.275.21	chr1	-	4391	19	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	50.6993376633874	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGCTTCAGCTTGTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	36407122	36374811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
ES.275.22	chr1	-	4737	22	NIC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	57.8086216294237	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGCTTCAGCTTGTTT	NA	False	NA	-9	True	AATAAA	-19	NA	36408260	36374812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.24	chr1	-	4657	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	56.0805447548435	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGCTTCAGCTTGTTT	NA	False	NA	-9	True	AATAAA	-19	NA	36408187	36374812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406849_36407116_36408094
ES.275.25	chr1	-	4626	21	NIC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_19	45.0301010436352	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGCTTCAGCTTGTTT	NA	False	NA	-9	True	AATAAA	-19	NA	36408228	36374812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406830_36407116_36408185
ES.275.26	chr1	-	8069	20	NNC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	0	-2	intron_retention	TRUE	canonical	0	0	junction_1	67.9016724323751	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGCTTCAGCTTGTTT	NA	False	NA	-9	True	AATAAA	-19	NA	36407122	36374812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36380236_36380291_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562
ES.275.27	chr1	-	4589	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	45.3423367284925	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTTGCTTCAGCTTGTT	NA	False	NA	-10	True	AATAAA	-18	NA	36408244	36374813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.28	chr1	-	4661	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	9	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	45.4030835957207	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408227	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404772_36406849_36407116_36408185
ES.275.29	chr1	-	3310	22	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	47.178101303787	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408224	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36375376_36376685_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.3	chr1	-	4309	7	ISM	ENSMUSG00000010453.13	ENSMUST00000185912.7	4527	21	21614	-1	20471	1	3prime_fragment	FALSE	canonical	3	179	junction_3	12.6414222125343	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTCAGCTTGTTTTCA	NA	False	NA	-6	True	AATAAA	-22	NA	36386624	36374809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918
ES.275.30	chr1	-	4544	23	NNC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2492994167766	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408227	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36375376_36375532_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.31	chr1	-	4563	21	NIC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	21	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	45.2164516520259	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408215	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406830_36407116_36408185
ES.275.32	chr1	-	2918	22	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	47.3426262794804	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408224	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36374984_36376685_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.33	chr1	-	4597	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.4469813301097	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408216	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385096_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.34	chr1	-	4753	22	FSM	ENSMUSG00000010453.13	ENSMUST00000188961.7	2907	22	-8	-1838	2	-5	multi-exon	FALSE	canonical	1	3	junction_8	60.2515512921168	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408260	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.35	chr1	-	4441	20	NIC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	53.4910870976835	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGTTGCTTCAGCTTG	NA	False	NA	-12	True	AATAAA	-16	NA	36408227	36374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.38	chr1	-	5826	19	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	794	-9	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	42.3175823716074	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGCGTTGCTTCAG	NA	False	NA	-16	True	AATAAA	-12	NA	36406301	36374819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562
ES.275.39	chr1	-	4787	20	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	2	-9	intron_retention	FALSE	canonical	3	87	junction_18	31.5032425891179	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGCGTTGCTTCAG	NA	False	NA	-16	True	AATAAA	-12	NA	36408260	36374819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.4	chr1	-	4608	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	48.8471851799057	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408214	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390720_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.42	chr1	-	3173	10	NNC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	16	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.0604677104176	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36408220	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383224_36393776_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.275.43	chr1	-	2861	22	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	22	-32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	54.9227451654407	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36408214	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36374984_36376685_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406849_36407116_36408185
ES.275.44	chr1	-	6725	20	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	-3	-32	intron_retention	FALSE	canonical	0	0	junction_7	46.2558224230555	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36408255	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385096_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36407116_36408185
ES.275.46	chr1	-	4441	20	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	-32	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_19	55.1144364756934	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36407122	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406849
ES.275.47	chr1	-	4485	21	NNC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	19	-32	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	55.7391020738583	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36408217	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406830_36407116_36408185
ES.275.49	chr1	-	4658	22	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.3294383932499	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAAATACAAAA	NA	False	NA	-39	True	NA	NA	NA	36408255	36374842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36380236_36380291_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404714_36406849_36407116_36408185
ES.275.5	chr1	-	3179	10	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	65.410007917768	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408212	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383224_36393775_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ES.275.7	chr1	-	6747	20	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	128	junction_15	24.0073857518289	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408230	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36407116_36408185
ES.275.8	chr1	-	5656	20	ISM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	77	0	-2	0	3prime_fragment	FALSE	canonical	3	87	junction_19	29.8025822004935	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408185	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
ES.275.9	chr1	-	4696	22	NNC	ENSMUSG00000010453.13	novel	2907	22	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.9404750276747	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408222	36374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36376733_36380236_36380291_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
ES.2750.1	chr10	-	175	1	Intergenic	novelGene_2093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTACTCTTTCAGG	NA	False	NA	NA	False	NA	NA	NA	45897364	45897189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_45897200_45897400
ES.27500.1	chr5	+	222	1	Intergenic	novelGene_22915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATCCCTGGCATCCAC	NA	False	NA	NA	False	NA	NA	NA	137280375	137280597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137280400_137280600
ES.27501.1	chr5	-	172	1	Antisense	novelGene_ENSMUSG00000099145.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAAAGATCCCTGAGTC	8205	False	NA	NA	False	ATTAAA	-32	NA	137292152	137291980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_137292000_137292200
ES.27502.1	chr5	+	1022	1	FSM	ENSMUSG00000051502.8	ENSMUST00000052825.7	1037	1	13	2	13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGCCCAGCCTGTGT	1557	False	NA	5	True	NA	NA	NA	137292903	137293925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137292900_137293900
ES.27503.1	chr5	-	3523	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	36	-535	2	535	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTACTCCGCGGGGCAAG	8293	False	NA	NA	False	AATAAA	-22	NA	137305900	137293430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.10	chr5	-	3054	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	240.502520992771	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8244	False	NA	-8	True	AGTAAA	-22	NA	137305949	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297170_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.11	chr5	-	2855	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-27	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	245.0800637635	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8230	False	NA	-8	True	AGTAAA	-22	NA	137305963	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.12	chr5	-	3976	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	243.585460451173	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8257	False	NA	-8	True	AGTAAA	-22	NA	137305936	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.13	chr5	-	3253	12	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-236	0	intron_retention	FALSE	canonical	3	165	junction_3	202.279775158112	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8451	False	NA	-8	True	AGTAAA	-22	NA	137299229	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298414_137298505
ES.27503.15	chr5	-	3291	22	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	320.732629305367	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8290	False	NA	-8	True	AGTAAA	-22	NA	137305903	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137299904_137300387_137300577_137300788_137300936_137301041_137301140_137301267_137301303_137305307_137305448_137305685
ES.27503.16	chr5	-	3150	20	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	281.161668184889	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8258	False	NA	-8	True	AGTAAA	-22	NA	137305935	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301041_137301140_137301267_137301303_137305307_137305448_137305685
ES.27503.17	chr5	-	5485	15	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_3	216.228443540433	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8277	False	NA	-8	True	AGTAAA	-22	NA	137305916	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137297146_137297819_137297935_137298015_137298414_137298505_137300577_137300788_137301303_137305307_137305448_137305685
ES.27503.2	chr5	-	3073	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-14	47	combination_of_known_junctions	FALSE	canonical	3	165	junction_3	155.869662861488	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGCCAATTTATTATTTT	8243	False	NA	46	True	NA	NA	NA	137305950	137293918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.20	chr5	-	3680	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-67	0	intron_retention	FALSE	non_canonical	0	0	junction_3	278.814466850642	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8391	False	NA	-8	True	AGTAAA	-22	NA	137305802	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298403_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.22	chr5	-	3820	20	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-28	0	intron_retention	FALSE	canonical	3	23	junction_15	222.33431691139	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8229	False	NA	-8	True	AGTAAA	-22	NA	137305964	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.23	chr5	-	3351	21	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_16	253.647289557764	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8241	False	NA	-8	True	AGTAAA	-22	NA	137305952	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137299910_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.25	chr5	-	3811	21	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	300.56371620673	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8275	False	NA	-8	True	AGTAAA	-22	NA	137305918	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301041_137301140_137301267_137301303_137305307_137305448_137305685
ES.27503.26	chr5	-	1876	15	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	284.469646169564	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8277	False	NA	-8	True	AGTAAA	-22	NA	137305916	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298279_137305875
ES.27503.27	chr5	-	3192	19	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_3	199.689828929212	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8212	False	NA	-8	True	AGTAAA	-22	NA	137305981	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.28	chr5	-	4707	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	165	junction_3	159.371682972018	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8267	False	NA	-8	True	AGTAAA	-22	NA	137305926	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.29	chr5	-	4008	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_3	306.465571988771	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8229	False	NA	-8	True	AGTAAA	-22	NA	137305964	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301041_137301140_137301267_137301303_137305307_137305448_137305685
ES.27503.3	chr5	-	3050	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	-57	-5	-49	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTATGTCCCTTCCC	8208	False	NA	-3	True	AGTAAA	-27	NA	137305985	137293967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.30	chr5	-	3308	21	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	10	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	274.66843193203	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8275	False	NA	-8	True	AGTAAA	-22	NA	137305918	137293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137299910_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.32	chr5	-	3802	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	2	-1	intron_retention	FALSE	canonical	3	23	junction_15	215.873860264985	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGCTGTATGTCC	8267	False	NA	-9	True	AGTAAA	-21	NA	137305926	137293973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.35	chr5	-	3614	21	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	271.005069140782	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGTGTGCTGTATGTC	8275	False	NA	-10	True	AGTAAA	-20	NA	137305918	137293974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300197_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.41	chr5	-	3145	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	13	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	191.325848350173	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGTGTGCTGTATGTC	8278	False	NA	-10	True	AGTAAA	-20	NA	137305915	137293974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.44	chr5	-	3348	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-49	1	intron_retention	FALSE	non_canonical	0	0	junction_3	191.217581775962	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGTGTGCTGTATGT	8208	False	NA	-11	True	AGTAAA	-19	NA	137305985	137293975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.5	chr5	-	3873	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-46	2	intron_retention	FALSE	non_canonical	0	0	junction_3	237.813912679035	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGTATGTCCCTT	8211	False	NA	-6	True	AGTAAA	-24	NA	137305982	137293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.52	chr5	-	2369	7	NIC	ENSMUSG00000037364.13	novel	3001	19	NA	NA	-298	0	intron_retention	FALSE	non_canonical	0	0	junction_3	304.29613682873	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	3250	False	NA	-12	True	AGTAAA	-18	NA	137297107	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295495_137295601_137296250_137296489_137296569_137296652
ES.27503.54	chr5	-	2976	20	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	218.146345958046	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8276	False	NA	-12	True	AGTAAA	-18	NA	137305917	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296244_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.57	chr5	-	4722	13	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-388	0	intron_retention	FALSE	non_canonical	0	0	junction_3	229.831988756038	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	6716	False	NA	-12	True	AGTAAA	-18	NA	137300964	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298414_137298505_137300577_137300788
ES.27503.58	chr5	-	2985	20	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	225.265359064504	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8276	False	NA	-12	True	AGTAAA	-18	NA	137305917	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297170_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.6	chr5	-	3164	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	-145	5	-145	2	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGTATGTCCCTT	8112	False	NA	-6	True	AGTAAA	-24	NA	137306081	137293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.60	chr5	-	3431	18	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	196.366069416264	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8275	False	NA	-12	True	AGTAAA	-18	NA	137305918	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.61	chr5	-	4959	18	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_3	196.685036187829	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8261	False	NA	-12	True	AGTAAA	-18	NA	137305932	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137300577_137300788_137301303_137305307_137305448_137305685
ES.27503.63	chr5	-	5350	16	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_9	245.272057565109	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8278	False	NA	-12	True	AGTAAA	-18	NA	137305915	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137297146_137297823_137297935_137298015_137298115_137298228_137298414_137298505_137300577_137300788_137301303_137305307_137305448_137305685
ES.27503.64	chr5	-	3580	21	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	304.347379650294	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8291	False	NA	-12	True	AGTAAA	-18	NA	137305902	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298010_137298115_137298228_137298414_137298505_137298676_137299579_137300197_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.66	chr5	-	3308	21	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	287.829133341293	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8261	False	NA	-12	True	AGTAAA	-18	NA	137305932	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296696_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137299910_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.67	chr5	-	4152	19	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-46	0	intron_retention	FALSE	non_canonical	0	0	junction_3	243.446834259785	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8211	False	NA	-12	True	AGTAAA	-18	NA	137305982	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.68	chr5	-	4878	14	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-720	0	intron_retention	FALSE	non_canonical	0	0	junction_3	223.41523418045	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	6384	False	NA	-12	True	AGTAAA	-18	NA	137301296	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298414_137298505_137300577_137300788_137300936_137301173
ES.27503.69	chr5	-	2986	20	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	219.337418255735	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8270	False	NA	-12	True	AGTAAA	-18	NA	137305923	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300929_137301168_137301303_137305307_137305448_137305685
ES.27503.7	chr5	-	4691	19	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	11	2	intron_retention	FALSE	non_canonical	0	0	junction_3	199.751110567224	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGTATGTCCCTT	8276	False	NA	-6	True	AGTAAA	-24	NA	137305917	137293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.70	chr5	-	3151	19	NIC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	165	junction_3	159.872566922287	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8258	False	NA	-12	True	AGTAAA	-18	NA	137305935	137293976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.71	chr5	-	4187	18	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	2	-1	intron_retention	FALSE	canonical	3	23	junction_14	227.261689319881	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAACTGTGTGCTGTAT	8267	False	NA	-13	True	AGTAAA	-17	NA	137305926	137293977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137301303_137305307_137305448_137305685
ES.27503.72	chr5	-	3052	19	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	199.914487892038	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8276	False	NA	-14	True	AGTAAA	-16	NA	137305917	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.73	chr5	-	2085	16	NNC	ENSMUSG00000037364.13	novel	3001	19	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	291.6858736533	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	7262	False	NA	-14	True	AGTAAA	-16	NA	137300418	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137297070_137297146_137297825_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387
ES.27503.75	chr5	-	1870	15	NNC	ENSMUSG00000037364.13	novel	3001	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	253.759929935395	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8290	False	NA	-14	True	AGTAAA	-16	NA	137305903	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298283_137305875
ES.27503.76	chr5	-	4855	18	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	196.420335242779	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8276	False	NA	-14	True	AGTAAA	-16	NA	137305917	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.77	chr5	-	4008	17	NIC	ENSMUSG00000037364.13	novel	3001	19	NA	NA	232	0	intron_retention	FALSE	non_canonical	0	0	junction_3	256.142019932302	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8742	False	NA	-14	True	AGTAAA	-16	NA	137305451	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307
ES.27503.78	chr5	-	2994	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	279.82255952647	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8277	False	NA	-14	True	AGTAAA	-16	NA	137305916	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298010_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300929_137301168_137301303_137305307_137305448_137305685
ES.27503.8	chr5	-	3032	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	-54	-6	-46	2	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGTATGTCCCTT	8211	False	NA	-6	True	AGTAAA	-24	NA	137305982	137293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.80	chr5	-	2799	19	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	199.689828929212	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8275	False	NA	-14	True	AGTAAA	-16	NA	137305918	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294566_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.81	chr5	-	2966	20	NNC	ENSMUSG00000037364.13	novel	2972	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	225.548356105355	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8267	False	NA	-14	True	AGTAAA	-16	NA	137305926	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300929_137301168_137301303_137305307_137305448_137305685
ES.27503.83	chr5	-	3376	21	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-35	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	270.666880131279	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8222	False	NA	-14	True	AGTAAA	-16	NA	137305971	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137299910_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.84	chr5	-	3374	18	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-669	0	intron_retention	FALSE	non_canonical	0	0	junction_3	295.598284874526	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	6435	False	NA	-14	True	AGTAAA	-16	NA	137301245	137293978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297170_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173
ES.27503.85	chr5	-	2987	20	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	240.598008433258	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAACTGTGTGCTGT	8291	False	NA	-15	True	AGTAAA	-15	NA	137305902	137293979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300581_137300781_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.86	chr5	-	4476	17	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	256.848014093452	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAACTGTGTGCTGT	8273	False	NA	-15	True	AGTAAA	-15	NA	137305920	137293979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137295231_137295340_137295495_137295601_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137301303_137305307_137305448_137305685
ES.27503.87	chr5	-	5082	16	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	165	junction_3	174.253710306425	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTAACTGTGTGCTG	8230	False	NA	-16	True	AGTAAA	-14	NA	137305963	137293980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137298414_137298505_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.88	chr5	-	3372	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	10	junction_15	259.456410228894	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTAACTGTGTGCTG	8293	False	NA	-16	True	AGTAAA	-14	NA	137305900	137293980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137298115_137298228_137298414_137298505_137298676_137299579_137299910_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.90	chr5	-	1377	6	NNC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	283.232342785918	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTTAACTGTGTGC	8261	False	NA	-18	True	AGTAAA	-12	NA	137305932	137293982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294092_137299971_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27503.91	chr5	-	2509	6	NIC	ENSMUSG00000037364.13	novel	3001	19	NA	NA	-337	4	intron_retention	FALSE	non_canonical	0	0	junction_3	313.864939105979	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTTAACTGTGTGC	3211	False	NA	-18	True	AGTAAA	-12	NA	137297146	137293982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137296250_137296489_137296569_137296652
ES.27503.92	chr5	-	2866	20	NNC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.215645409306	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTGTTAACTGTGTG	8224	False	NA	-19	True	AGTAAA	-11	NA	137305969	137293983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300878_137301267_137301303_137305307_137305448_137305685
ES.27503.93	chr5	-	3837	20	NIC	ENSMUSG00000037364.13	novel	2988	20	NA	NA	-45	2	intron_retention	FALSE	non_canonical	0	0	junction_3	243.458859083998	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTGTTAACTGTGT	8212	False	NA	-20	True	AGTAAA	-10	NA	137305981	137293984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ES.27504.1	chr5	+	566	2	Antisense	novelGene_ENSMUSG00000037344.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	5494	False	NA	NA	False	NA	NA	NA	137313269	137315155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_137313352_137314671
ES.27505.1	chr5	+	183	1	Intergenic	novelGene_22916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	137322493	137322676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137322500_137322700
ES.27506.1	chr5	+	687	1	Intergenic	novelGene_22917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCAGCTCTCCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	137324115	137324802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137324100_137324800
ES.27507.1	chr5	+	179	1	Intergenic	novelGene_22918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTTATGTAATATAATA	NA	False	NA	NA	False	NA	NA	NA	137325003	137325182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137325000_137325200
ES.27508.1	chr5	+	4034	18	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	-16447	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.64047614561	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTTCCTTCTTCCTTT	NA	False	NA	31	True	NA	NA	NA	137331923	137372579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137332140_137345929_137346133_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.13	chr5	+	4253	17	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_8	80.3083656523404	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCAGTCCAGAGGGTG	NA	False	NA	12	True	AATAAA	-15	NA	137348372	137372775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361517_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.14	chr5	+	5040	16	NIC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	2	-3	intron_retention	FALSE	canonical	3	265	junction_1	34.3213571345242	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCCTTAGACAGTTCC	NA	False	NA	21	True	NA	NA	NA	137348372	137372569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.15	chr5	+	5321	16	ISM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	-61	7	2	-7	intron_retention	FALSE	canonical	3	39	junction_6	73.8353724323391	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCAGTCCAGAGGGTG	NA	False	NA	12	True	AATAAA	-15	NA	137348372	137372775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646
ES.27508.16	chr5	+	3701	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	2	637	2	-419	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCCATCTTCCCAGA	NA	False	NA	NA	False	AAGAAA	-15	NA	137348372	137372153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.19	chr5	+	3862	18	NNC	ENSMUSG00000029710.16	novel	3894	18	NA	NA	2	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.9897961562811	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATTTAAAAAGAAACT	NA	False	NA	-42	True	NA	NA	NA	137348372	137372721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348423_137348829_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.2	chr5	+	230	1	Intergenic	novelGene_22919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACATCCCTTCAAG	NA	False	NA	NA	False	TATAAA	-10	NA	137332411	137332641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137332400_137332600
ES.27508.20	chr5	+	3547	14	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	2	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	88.9363178856268	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAGTCCAGAGGGTGA	NA	False	NA	13	True	AATAAA	-16	NA	137348372	137372776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137358647_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.22	chr5	+	4275	17	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	2	-10	intron_retention	FALSE	non_canonical	0	0	junction_5	77.2049828378972	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTCAGTCCAGAGG	NA	False	NA	9	True	AATAAA	-12	NA	137348372	137372772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359440_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.23	chr5	+	5285	16	ISM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	12	14	12	-6	intron_retention	FALSE	canonical	3	265	junction_1	34.6933230848051	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCAGTCCAGAGGGTGA	NA	False	NA	13	True	AATAAA	-16	NA	137348382	137372776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646
ES.27508.25	chr5	+	7001	16	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	-2	-43	intron_retention	FALSE	canonical	0	0	junction_6	108.465539842539	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTATAAATA	NA	False	NA	-24	True	AAAAAG	-4	NA	137348400	137372739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360225_137360374_137360651_137360777_137361420_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646
ES.27508.26	chr5	+	2866	12	NNC	ENSMUSG00000029710.16	novel	3784	16	NA	NA	-10	-30	intron_retention	FALSE	non_canonical	0	0	junction_11	88.1373833688489	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAAAAAAAGGGG	NA	False	NA	-11	True	AAAAAG	-17	NA	137348423	137372752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137363965_137372157
ES.27508.27	chr5	+	3986	17	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_8	80.3083656523404	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTTAGACAGTTCCT	NA	False	NA	22	True	NA	NA	NA	137348434	137372570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361517_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.28	chr5	+	5051	15	ISM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	64	363	1	-145	intron_retention	FALSE	canonical	3	265	junction_1	35.8616957837997	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTGTTAATTTTTT	NA	False	NA	9	True	NA	NA	NA	137348434	137372427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285
ES.27508.3	chr5	+	2228	1	FSM	ENSMUSG00000105802.2	ENSMUST00000198569.2	937	1	-517	-774	-517	774	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGGAGGGAGCAGAGG	1504	False	NA	NA	False	NA	NA	NA	137335153	137337381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137335200_137337400
ES.27508.31	chr5	+	3912	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	30	354	30	-144	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTTAATTTTTTC	NA	False	NA	10	True	NA	NA	NA	137348463	137372428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.33	chr5	+	4279	18	NNC	ENSMUSG00000029710.16	novel	3741	18	NA	NA	62	-7	intron_retention	FALSE	canonical	0	0	junction_8	119.768143946954	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCAGTCCAGAGGGTG	NA	False	NA	12	True	AATAAA	-15	NA	137348495	137372775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352352_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137361757_137361839_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.34	chr5	+	3631	15	NNC	ENSMUSG00000029710.16	novel	4340	17	NA	NA	77	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	82.2604437882808	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCCAGAGGGTGACT	NA	False	NA	15	True	AATAAA	-18	NA	137348510	137372778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358747_137361483_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.36	chr5	+	3785	16	ISM	ENSMUSG00000029710.16	ENSMUST00000166239.8	3741	18	3657	-202	3574	-8	3prime_fragment	FALSE	canonical	3	269	junction_7	33.5735345506282	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTCAGTCCAGAGGGT	1923	False	NA	11	True	AATAAA	-14	NA	137352348	137372774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.37	chr5	+	3741	15	ISM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	4105	9	3764	-9	3prime_fragment	FALSE	canonical	3	39	junction_4	76.5941131110303	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTCTCAGTCCAGAGGG	2113	False	NA	10	True	AATAAA	-13	NA	137352538	137372773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.38	chr5	+	2568	14	NNC	ENSMUSG00000029710.16	novel	4296	17	NA	NA	7299	-414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.9153576633551	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCTTCCCAGAGGGCT	5648	False	NA	NA	False	AAGAAA	-20	NA	137356073	137372158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137356201_137358626_137358783_137359395_137359729_137360621_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.39	chr5	+	4329	14	ISM	ENSMUSG00000029710.16	ENSMUST00000166239.8	3741	18	7456	-1451	7373	1229	3prime_fragment	FALSE	canonical	3	269	junction_5	35.0490780167251	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGGGTGACATTTAATA	5722	False	NA	NA	False	NA	NA	NA	137356147	137374023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.4	chr5	+	4477	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	-111	-26	-111	22	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTGAGACTAGGGGAC	NA	False	NA	53	True	NA	NA	NA	137348259	137372816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.5	chr5	+	4257	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	-164	203	-101	7	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTTCCTTCTTCCTTT	NA	False	NA	31	True	NA	NA	NA	137348269	137372579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.6	chr5	+	4448	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	-152	0	-89	0	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGAGGGTGACTGGGA	NA	False	NA	19	True	AATAAA	-22	NA	137348281	137372782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.7	chr5	+	4069	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	-89	360	-89	-142	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTTTCCT	NA	False	NA	12	True	NA	NA	NA	137348281	137372430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27508.8	chr5	+	4206	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	-74	208	-74	10	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCCTTCTTCCTTTCCT	NA	False	NA	34	True	NA	NA	NA	137348296	137372582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ES.27509.1	chr5	-	1777	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	148	243	-49	-243	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCTGTTCTTTATT	1675	False	NA	0	True	TTTAAA	-6	NA	137312518	137308158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ES.27509.11	chr5	-	3748	1	NIC	ENSMUSG00000037344.15	novel	3330	14	NA	NA	82	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAGA	6583	False	NA	NA	False	NA	NA	NA	137331777	137328029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137328000_137331800
ES.27509.2	chr5	-	3775	5	NIC	ENSMUSG00000023348.12	novel	2168	9	NA	NA	-36	-244	intron_retention	FALSE	canonical	3	95	junction_3	18.3098334236006	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTCTTTAT	1688	False	NA	-1	True	TTTAAA	-5	NA	137312505	137308159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137308437_137308546_137310306_137310401_137311352_137311612_137311739_137311842
ES.27509.3	chr5	-	5634	21	Fusion	ENSMUSG00000037344.15_ENSMUSG00000023348.12	novel	3330	14	NA	NA	21	-247	intron_retention	FALSE	canonical	3	21	junction_10	44.8540968028563	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCCAAGTCTGTTCTT	6522	False	NA	-4	True	TTTAAA	-2	NA	137331838	137308162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
ES.27509.4	chr5	-	3482	6	NIC	ENSMUSG00000023348.12	novel	2168	9	NA	NA	-1	-251	intron_retention	FALSE	canonical	3	95	junction_3	16.5819178625393	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTCCAAGTCTGT	1723	False	NA	-8	True	NA	NA	NA	137312470	137308166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137308437_137308546_137310306_137310401_137311352_137311612_137311739_137311842_137311971_137312221
ES.27509.5	chr5	-	2737	6	NIC	ENSMUSG00000023348.12	novel	2168	9	NA	NA	-37	-251	intron_retention	FALSE	canonical	3	98	junction_4	14.2407864951343	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTCCAAGTCTGT	1687	False	NA	-8	True	NA	NA	NA	137312506	137308166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137308437_137308546_137309094_137310135_137310306_137310401_137311739_137311842_137311971_137312221
ES.27509.6	chr5	-	3625	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	-295	0	-295	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6206	False	NA	0	True	AATAAA	-15	NA	137332154	137312819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
ES.27509.8	chr5	-	4984	14	NNC	ENSMUSG00000037344.15	novel	3330	14	NA	NA	-2094	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.99111987943607	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCTGGTGGAGCACTG	4407	False	NA	-2	True	AATAAA	-13	NA	137333953	137312821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137332147
ES.27509.9	chr5	-	3324	14	NNC	ENSMUSG00000037344.15	novel	3330	14	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.81566652791273	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGCTGGTGGAGCACT	6544	False	NA	-3	True	AATAAA	-12	NA	137331816	137312822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325785_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
ES.2751.1	chr10	+	277	1	Intergenic	novelGene_2094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAATCTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	45932226	45932503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_45932200_45932500
ES.27510.1	chr5	-	2357	2	Intergenic	novelGene_22920	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137347392	137344829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137345693_137345898
ES.27510.2	chr5	-	412	4	Antisense	novelGene_ENSMUSG00000029710.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCACTGAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	137351052	137345677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_137345687_137345892_137346107_137346193_137346294_137350963
ES.27510.3	chr5	-	1491	3	Intergenic	novelGene_22921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGCACTGAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	137347462	137345678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137345687_137345892_137346107_137346193
ES.27510.4	chr5	-	181	1	Intergenic	novelGene_22922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATAGGA	NA	False	NA	NA	False	NA	NA	NA	137345891	137345710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137345700_137345900
ES.27510.5	chr5	-	703	3	Intergenic	novelGene_22924	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	AATAAA	-25	NA	137348164	137345892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137346105_137346193_137346298_137347777
ES.27510.6	chr5	-	1432	2	Intergenic	novelGene_22923	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	AATAAA	-25	NA	137347417	137345892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137346101_137346193
ES.27511.1	chr5	+	1352	1	Antisense	novelGene_ENSMUSG00000079173.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	137399529	137400881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_137399500_137400900
ES.27512.1	chr5	-	2699	18	NNC	ENSMUSG00000079173.12	novel	16451	87	NA	NA	6020	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.0189711577309	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTTGTGATTG	NA	False	NA	NA	False	TTTAAA	-2	NA	137393980	137376900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137376982_137377065_137377110_137377209_137377340_137379047_137379189_137380334_137380474_137380567_137380768_137381974_137382115_137384591_137384763_137385171_137385344_137386082_137386213_137387093_137387339_137387496_137387639_137389899_137390118_137390212_137390355_137391271_137391490_137391800_137391943_137392642_137392861_137393954
ES.27512.2	chr5	-	10209	57	NIC	ENSMUSG00000079173.12	novel	16451	87	NA	NA	12795	-6	intron_retention	FALSE	canonical	0	0	junction_45	2.74181295228287	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTTTTTGTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	137436090	137376904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137376982_137377065_137377110_137377209_137377340_137379047_137379189_137380334_137380474_137380567_137380768_137381974_137382115_137384591_137384763_137385171_137385344_137386082_137386213_137387093_137387339_137387496_137387639_137389899_137390118_137390212_137390355_137391271_137391490_137391800_137391943_137392642_137392861_137393816_137393959_137394346_137394565_137394895_137395038_137396423_137396642_137397073_137397201_137398244_137398463_137398794_137398937_137401291_137401510_137401882_137402073_137403526_137403745_137404103_137404234_137404590_137404809_137405171_137405314_137405917_137406136_137406526_137406669_137407842_137408061_137408454_137408597_137409649_137409868_137410213_137410356_137410846_137411056_137411621_137411764_137412430_137412649_137413268_137413411_137414465_137414684_137415299_137415442_137417304_137417523_137418155_137418298_137419358_137419577_137420074_137420217_137422177_137422396_137422790_137422933_137423818_137424037_137424425_137424568_137426055_137426274_137426643_137426786_137427276_137427495_137432154_137432454_137433889_137434015_137434584_137435100_137435981
ES.27512.4	chr5	-	10133	58	ISM	ENSMUSG00000079173.12	ENSMUST00000164178.2	16451	87	38752	7	12780	-7	3prime_fragment	FALSE	canonical	0	0	junction_45	2.7683743575543	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATACTTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	137436105	137376905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137376982_137377065_137377110_137377209_137377340_137379047_137379189_137380334_137380474_137380567_137380768_137381974_137382115_137384591_137384763_137385171_137385344_137386082_137386213_137387093_137387339_137387496_137387639_137389899_137390118_137390212_137390355_137391271_137391490_137391800_137391943_137392642_137392861_137393816_137393959_137394346_137394565_137394895_137395038_137396423_137396642_137397073_137397201_137398244_137398463_137398794_137398937_137401291_137401510_137401882_137402073_137403526_137403745_137404103_137404234_137404590_137404809_137405171_137405314_137405917_137406136_137406526_137406669_137407842_137408061_137408454_137408597_137409649_137409868_137410213_137410356_137410846_137411056_137411621_137411764_137412430_137412649_137413268_137413411_137414465_137414684_137415299_137415442_137417304_137417523_137418155_137418298_137419358_137419577_137420074_137420217_137422177_137422396_137422790_137422933_137423818_137424037_137424425_137424568_137426055_137426274_137426643_137426786_137427276_137427495_137432154_137432454_137433889_137434015_137434584_137434750_137434839_137435100_137435981
ES.27512.5	chr5	-	2400	4	ISM	ENSMUSG00000079173.12	ENSMUST00000164178.2	16451	87	87123	6407	12266	-6407	intron_retention	FALSE	canonical	1	1	junction_2	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	137387734	137383305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137384763_137385171_137385344_137386082_137386213_137387093
ES.27512.6	chr5	-	1423	3	ISM	ENSMUSG00000079173.12	ENSMUST00000164178.2	16451	87	81965	13560	7108	6337	internal_fragment	FALSE	canonical	3	9	junction_2	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	137392892	137390458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137391490_137391800_137391943_137392642
ES.27512.7	chr5	-	3905	22	ISM	ENSMUSG00000079173.12	ENSMUST00000164178.2	16451	87	64540	14411	-474	5486	internal_fragment	FALSE	canonical	1	1	junction_15	2.61688222172078	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGACTGCAAAGACTTC	2308	False	NA	NA	False	AATAAA	-17	NA	137410317	137391309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137391490_137391800_137391943_137392642_137392861_137393816_137393959_137394346_137394565_137394895_137395038_137396423_137396642_137397073_137397201_137398244_137398463_137398794_137398937_137401291_137401510_137401882_137402073_137403526_137403745_137404103_137404234_137404590_137404809_137405171_137405314_137405917_137406136_137406526_137406669_137407842_137408061_137408454_137408597_137409649_137409868_137410213
ES.27512.8	chr5	-	3545	14	NIC	ENSMUSG00000079173.12	novel	16451	87	NA	NA	-4678	5484	intron_retention	FALSE	canonical	1	2	junction_9	2.64463283656478	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGACTGCAAAGACT	7947	False	NA	NA	False	AATAAA	-15	NA	137404678	137391311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137391490_137391800_137391943_137392642_137393959_137394346_137394565_137394895_137395038_137396423_137396642_137397073_137397201_137398244_137398463_137398794_137398937_137401291_137401510_137401882_137402073_137403526_137403745_137404103_137404234_137404590
ES.27513.1	chr5	-	869	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	17	-5	17	4	multi-exon	FALSE	canonical	3	320	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGAATGGCCTCTTTTT	1656	False	NA	-28	True	AATAAA	-24	NA	137500763	137499695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137500342_137500540
ES.27513.2	chr5	-	967	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	20	1	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1752	False	NA	-33	True	AATAAA	-19	NA	137500667	137499700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137499700_137500700
ES.27514.1	chr5	+	6187	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-31	-1	multi-exon	TRUE	non_canonical	0	0	junction_23	19.2897556893863	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	28	True	AATAAA	-23	NA	137508483	137526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.10	chr5	+	6216	26	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	20	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	22.6415547169359	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	28	True	AATAAA	-23	NA	137508534	137526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521086_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523616_137523691_137523822_137523913
ES.27514.11	chr5	+	5937	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	22	-2	multi-exon	FALSE	canonical	0	0	junction_1	20.634319662373	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	137508536	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508678_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.12	chr5	+	6238	26	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	161	-4	intron_retention	FALSE	canonical	0	0	junction_22	18.7157260078256	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTGTCTGCCAGCTT	NA	False	NA	25	True	AATAAA	-20	NA	137508675	137526193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.14	chr5	+	6058	28	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	164	-1	multi-exon	FALSE	non_canonical	0	0	junction_24	19.6550499275459	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	28	True	AATAAA	-23	NA	137508678	137526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.15	chr5	+	4242	28	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	168	-1799	multi-exon	FALSE	canonical	0	0	junction_3	20.2197800723163	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGTTATTTTTGGCC	NA	False	NA	106	True	NA	NA	NA	137508682	137524398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516972_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.16	chr5	+	4236	28	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	172	-1824	multi-exon	FALSE	canonical	0	0	junction_24	18.8149606293562	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAGGCTGAAAGGAAAAA	NA	False	NA	81	True	NA	NA	NA	137508686	137524373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.17	chr5	+	5752	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	182	-4	intron_retention	TRUE	non_canonical	0	0	junction_22	21.3842003280141	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTGTCTGCCAGCTT	NA	False	NA	25	True	AATAAA	-20	NA	137508696	137526193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913_137525345_137525941
ES.27514.18	chr5	+	4291	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	182	-1825	multi-exon	FALSE	non_canonical	0	0	junction_23	19.1455419131434	161	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAGGCTGAAAGGAAAA	NA	False	NA	80	True	NA	NA	NA	137508696	137524372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.19	chr5	+	6047	28	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	185	0	multi-exon	FALSE	canonical	0	0	junction_24	18.8149606293562	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCCAGCTTTTCC	NA	False	NA	29	True	AATAAA	-24	NA	137508699	137526197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.2	chr5	+	6193	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-30	0	multi-exon	FALSE	canonical	0	0	junction_23	19.3589955849773	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCCAGCTTTTCC	NA	False	NA	29	True	AATAAA	-24	NA	137508484	137526197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.21	chr5	+	6550	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	185	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	21.5303013271133	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	137508699	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521665_137521765_137522060_137522371_137522450_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.23	chr5	+	6564	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-2	intron_retention	FALSE	canonical	0	0	junction_20	18.6989885799485	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	137508700	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.25	chr5	+	6844	22	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-1	intron_retention	FALSE	canonical	0	0	junction_10	20.5525707215741	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	28	True	AATAAA	-23	NA	137508700	137526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518639_137518808_137519063_137519146_137519261_137520109_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523822_137523913
ES.27514.26	chr5	+	5663	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-4	multi-exon	FALSE	canonical	0	0	junction_19	19.6822586190667	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTGTCTGCCAGCTT	NA	False	NA	25	True	AATAAA	-20	NA	137508700	137526193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521769_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.29	chr5	+	6423	25	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-5	intron_retention	FALSE	canonical	0	0	junction_22	16.9918281012439	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCTTGTCTGCCAGCT	NA	False	NA	24	True	AATAAA	-19	NA	137508700	137526192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523822_137523913
ES.27514.3	chr5	+	4321	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-25	-1861	multi-exon	FALSE	non_canonical	0	0	junction_23	19.2897556893863	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGATAAAA	NA	False	NA	44	True	NA	NA	NA	137508489	137524336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.30	chr5	+	5158	21	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-1799	intron_retention	FALSE	non_canonical	0	0	junction_17	20.1131797585563	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGTTATTTTTGGCC	NA	False	NA	106	True	NA	NA	NA	137508700	137524398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.32	chr5	+	7612	22	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	186	-2	intron_retention	FALSE	canonical	0	0	junction_19	18.6529346964255	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	NA	False	NA	27	True	AATAAA	-22	NA	137508700	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523622_137523691
ES.27514.33	chr5	+	6361	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	188	-8	intron_retention	FALSE	canonical	0	0	junction_21	17.5468048136475	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTACCTTGTCTGCCA	NA	False	NA	21	True	AATAAA	-16	NA	137508702	137526189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523822_137523913
ES.27514.34	chr5	+	4812	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	190	-1861	intron_retention	FALSE	canonical	0	0	junction_21	18.6004654697129	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGATAAAA	NA	False	NA	44	True	NA	NA	NA	137508704	137524336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523822_137523913
ES.27514.35	chr5	+	4227	28	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	194	-1799	multi-exon	FALSE	non_canonical	0	0	junction_24	20.4746154186888	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGTTATTTTTGGCC	NA	False	NA	106	True	NA	NA	NA	137508708	137524398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.37	chr5	+	6400	25	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	196	-5	intron_retention	FALSE	canonical	0	0	junction_21	18.3507019998933	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCTTGTCTGCCAGCT	NA	False	NA	24	True	AATAAA	-19	NA	137508710	137526192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.38	chr5	+	4250	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	196	-1861	multi-exon	FALSE	canonical	0	0	junction_23	18.2239925736773	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGATAAAA	NA	False	NA	44	True	NA	NA	NA	137508710	137524336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.41	chr5	+	8309	22	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-2134	-2	intron_retention	FALSE	canonical	0	0	junction_18	19.2823630245238	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	4242	False	NA	27	True	AATAAA	-22	NA	137514675	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.44	chr5	+	5569	15	NNC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	1772	-2	intron_retention	FALSE	canonical	0	0	junction_11	24.7391493427741	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTCTGCCAGCTTTT	1442	False	NA	27	True	AATAAA	-22	NA	137518911	137526195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137519063_137519146_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.45	chr5	+	4608	16	NIC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	1823	0	intron_retention	FALSE	canonical	0	0	junction_12	22.4542992666339	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCCAGCTTTTCC	1493	False	NA	29	True	AATAAA	-24	NA	137518962	137526197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.47	chr5	+	4479	15	NNC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	2097	-6	intron_retention	FALSE	canonical	0	0	junction_11	24.8981599188964	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACCTTGTCTGCCAGC	1767	False	NA	23	True	AATAAA	-18	NA	137519236	137526191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137519265_137520109_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.48	chr5	+	4303	15	ISM	ENSMUSG00000029714.12	ENSMUST00000031727.10	5440	24	2967	6	2967	-6	3prime_fragment	FALSE	canonical	0	0	junction_11	23.001441835907	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACCTTGTCTGCCAGC	2637	False	NA	23	True	AATAAA	-18	NA	137520106	137526191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.49	chr5	+	4016	14	NNC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	3314	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	29.0504560047315	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTGTCTGCCAGCTT	2984	False	NA	25	True	AATAAA	-20	NA	137520453	137526193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522985_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.5	chr5	+	6690	24	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_20	18.2445061259744	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTGCCAGCTTTTC	NA	False	NA	28	True	AATAAA	-23	NA	137508504	137526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.51	chr5	+	3506	9	NNC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	4521	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.2831663715363	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTTGTCTGCCAGCTT	4191	False	NA	25	True	AATAAA	-20	NA	137521660	137526193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523694_137523822_137523913
ES.27514.52	chr5	+	3423	3	NIC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	5449	-5	intron_retention	FALSE	canonical	0	0	junction_1	38.5	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCTTGTCTGCCAGCT	5119	False	NA	24	True	AATAAA	-19	NA	137522588	137526192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137523104_137523192_137523822_137523913
ES.27514.53	chr5	+	2965	2	NNC	ENSMUSG00000029714.12	novel	5440	24	NA	NA	6028	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACCTTGTCTGCCAGC	5698	False	NA	23	True	AATAAA	-18	NA	137523167	137526191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137524692_137524750
ES.27514.6	chr5	+	5049	23	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	-10	-1837	intron_retention	FALSE	canonical	0	0	junction_21	16.8726391063527	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGAAAAAAAAAGTTAGG	NA	False	NA	68	True	NA	NA	NA	137508504	137524360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137523104_137523192_137523354_137523433
ES.27514.7	chr5	+	4337	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	6	-1799	multi-exon	FALSE	non_canonical	0	0	junction_16	21.5041278547376	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTGTTATTTTTGGCC	NA	False	NA	106	True	NA	NA	NA	137508520	137524398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521231_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523613_137523691_137523822_137523913
ES.27514.8	chr5	+	4448	26	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	7	-1862	intron_retention	FALSE	canonical	0	0	junction_22	19.737314913635	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGATAAA	NA	False	NA	43	True	NA	NA	NA	137508521	137524335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522915_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ES.27514.9	chr5	+	6294	27	Fusion	ENSMUSG00000029714.12_ENSMUSG00000106237.2	novel	5440	24	NA	NA	7	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	22.0208682629286	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCTTGTCTGCCAGCT	NA	False	NA	24	True	AATAAA	-19	NA	137508521	137526192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137508883_137515646_137515874_137516743_137516875_137516949_137517016_137517139_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519261_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523616_137523691_137523822_137523913
ES.27515.1	chr5	-	2488	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	245	-873	32	873	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGTGGAAAGGAAAAC	1777	False	NA	NA	False	NA	NA	NA	137531527	137525515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ES.27515.2	chr5	-	1690	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	169	1	-40	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTCTCCTTGCTTACT	1701	False	NA	-6	True	CATAAA	-21	NA	137531603	137526389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ES.27515.3	chr5	-	1652	10	NNC	ENSMUSG00000029713.16	novel	1860	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	223.071488292182	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTCTCCTTGCTTACT	1757	False	NA	-6	True	CATAAA	-21	NA	137531547	137526389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528089_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ES.27515.4	chr5	-	1886	9	NIC	ENSMUSG00000029713.16	novel	1860	10	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	634	junction_8	45.0789238447415	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1778	False	NA	-7	True	CATAAA	-20	NA	137531526	137526390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528553_137528659_137528699_137528956_137529103_137531400
ES.27515.5	chr5	-	1604	10	NNC	ENSMUSG00000029713.16	novel	1860	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	224.338588898869	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1803	False	NA	-7	True	CATAAA	-20	NA	137531501	137526390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528570_137528659_137528699_137528956_137529103_137531400
ES.27515.6	chr5	-	1806	9	NIC	ENSMUSG00000029713.16	novel	1860	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	634	junction_8	48.2725012299964	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1821	False	NA	-7	True	CATAAA	-20	NA	137531483	137526390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137526872_137526952_137527170_137527265_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ES.27515.7	chr5	-	4561	6	NIC	ENSMUSG00000029713.16	novel	1383	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	696	junction_5	33.4149667065523	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTCTCCTTGCTTAC	1739	False	NA	-7	True	CATAAA	-20	NA	137531565	137526390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528553_137528659
ES.27515.8	chr5	-	1749	10	NNC	ENSMUSG00000029713.16	novel	1860	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	225.5974783153	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	1741	False	NA	-9	True	CATAAA	-18	NA	137531563	137526392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529205_137531400
ES.27516.1	chr5	+	187	1	Intergenic	novelGene_22925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTAGACTGTGGA	NA	False	NA	NA	False	NA	NA	NA	137541828	137542015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137541800_137542000
ES.27517.1	chr5	+	3010	18	NIC	ENSMUSG00000029716.14	novel	3072	19	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	2.48594665989593	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTCCATACGCAATTTA	3561	False	NA	NA	False	AATAAA	-15	NA	137568095	137585727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137568381_137569538_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
ES.27517.2	chr5	+	4426	18	NNC	ENSMUSG00000029716.14	novel	2973	18	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_5	2.81001668529322	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCCATACGCAATT	3568	False	NA	NA	False	AATAAA	-13	NA	137568102	137585725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575380_137575638_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581094_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
ES.27517.3	chr5	+	4880	15	NNC	ENSMUSG00000029716.14	novel	2973	18	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_5	2.25537905769242	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCCATACGCAATT	3568	False	NA	NA	False	AATAAA	-13	NA	137568102	137585725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575380_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137582329_137585090
ES.27517.4	chr5	+	3041	19	FSM	ENSMUSG00000029716.14	ENSMUST00000198866.5	3072	19	26	5	2	-2	multi-exon	FALSE	canonical	0	0	junction_1	2.65099562009781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCAATTTAGCTTCCTCT	3593	False	NA	NA	False	AATAAA	-24	NA	137568127	137585736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137568381_137569249_137569304_137569538_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
ES.27517.5	chr5	+	2910	20	FSM	ENSMUSG00000029716.14	ENSMUST00000031729.13	2926	20	16	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	2.69605231049804	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCTTCCTCTTCATGCC	3594	False	NA	NA	False	AATAAA	-31	NA	137568128	137585743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137568197_137568333_137568381_137569249_137569304_137569538_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
ES.27517.6	chr5	+	3178	13	NIC	ENSMUSG00000029716.14	novel	2973	18	NA	NA	-63	-1	intron_retention	FALSE	canonical	1	1	junction_5	1.97730175295078	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTCCATACGCAATTT	5115	False	NA	NA	False	AATAAA	-14	NA	137569649	137585726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137581249_137581335_137581413_137581492_137582329_137585090
ES.27517.7	chr5	+	452	1	NIC	ENSMUSG00000029716.14	novel	3072	19	NA	NA	642	269	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGACTGTGTGGCTTG	NA	False	NA	NA	False	NA	NA	NA	137582188	137582640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137582200_137582600
ES.27518.1	chr5	+	266	1	Intergenic	novelGene_22926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGTGAGCTAGATCC	NA	False	NA	NA	False	NA	NA	NA	137588572	137588838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137588600_137588800
ES.27519.1	chr5	+	169	1	Intergenic	novelGene_22927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	137589228	137589397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137589200_137589400
ES.2752.1	chr10	+	178	1	Intergenic	novelGene_2095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	46676293	46676471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_46676300_46676500
ES.27520.1	chr5	+	167	1	Intergenic	novelGene_22928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	137596611	137596778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137596600_137596800
ES.27521.1	chr5	-	1311	7	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-4	23	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	111.835320399634	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTTCTTACTTTTTCTT	9614	False	NA	13	True	ATTAAA	-44	NA	137599324	137594883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594991_137595176_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598806_137599003
ES.27521.10	chr5	-	1344	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	3	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	124.377811526011	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9988	False	NA	-21	True	ATTAAA	-10	NA	137598950	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594991_137595176_137595316_137595412_137595578_137596851_137596942_137597855_137598315_137598532
ES.27521.11	chr5	-	1408	7	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.835320399634	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9607	False	NA	-21	True	ATTAAA	-10	NA	137599331	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137595005_137595066_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598806_137599003
ES.27521.13	chr5	-	928	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	4	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	122.381371131394	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9989	False	NA	-21	True	ATTAAA	-10	NA	137598949	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594991_137595176_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598704
ES.27521.15	chr5	-	1100	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	1	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.456197445006	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9986	False	NA	-21	True	ATTAAA	-10	NA	137598952	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137595008_137595196_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ES.27521.2	chr5	-	1161	7	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	114.841073759445	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGAAACGTAGGATGCT	9614	False	NA	-12	True	ATTAAA	-19	NA	137599324	137594908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137595005_137595066_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598806_137599252
ES.27521.3	chr5	-	1214	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.456197445006	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAGAAACGTAGGATG	9988	False	NA	-14	True	ATTAAA	-17	NA	137598950	137594910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594987_137595066_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ES.27521.4	chr5	-	1227	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	2	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.456197445006	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9987	False	NA	-21	True	ATTAAA	-10	NA	137598951	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137595020_137595080_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ES.27521.5	chr5	-	1478	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-7	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	101.456197445006	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9611	False	NA	-21	True	ATTAAA	-10	NA	137599327	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594991_137595176_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ES.27521.8	chr5	-	944	7	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.464364074415	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9630	False	NA	-21	True	ATTAAA	-10	NA	137599308	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137595005_137595066_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598614_137599252
ES.27521.9	chr5	-	1225	6	NNC	ENSMUSG00000037221.14	novel	1456	6	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.456197445006	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	9979	False	NA	-21	True	ATTAAA	-10	NA	137598959	137594917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137594996_137595066_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ES.27522.1	chr5	+	160	1	Intergenic	novelGene_22929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATTTTATTTAGTAT	781	False	NA	NA	False	NA	NA	NA	137602853	137603013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137602900_137603000
ES.27523.1	chr5	+	301	1	ISM	ENSMUSG00000106617.2	ENSMUST00000196660.2	1749	2	2022	73	2022	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGGATCTTTTC	2739	False	NA	NA	False	NA	NA	NA	137613135	137613436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137613100_137613400
ES.27524.1	chr5	+	3250	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	-166	-6	-166	1	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2018	False	NA	31	True	AATAAA	-33	NA	137627216	137639362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.10	chr5	+	3220	17	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	-9	1	intron_retention	FALSE	canonical	0	0	junction_6	72.2067074013903	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCCTGCCTGTCCA	2197	False	NA	31	True	AATAAA	-33	NA	137627395	137639362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635825_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.11	chr5	+	2583	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	-8	262	intron_retention	FALSE	canonical	3	234	junction_8	21.2425538424644	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTGCGTGTGT	2198	False	NA	27	True	TATAAA	-15	NA	137627396	137638763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.12	chr5	+	2653	16	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	-1	262	intron_retention	FALSE	canonical	3	234	junction_8	21.2429334655603	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTGCGTGTGT	2205	False	NA	27	True	TATAAA	-15	NA	137627403	137638763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.13	chr5	+	3232	16	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	0	-13	intron_retention	FALSE	canonical	3	234	junction_8	21.2429334655603	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTAGGTTGGTCCTCAG	2206	False	NA	12	True	AATAAA	-14	NA	137627404	137639343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.14	chr5	+	2979	18	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	69.6632532841489	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGTGCCTGCCTGTCC	2206	False	NA	30	True	AATAAA	-32	NA	137627404	137639361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635082_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.16	chr5	+	4788	21	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-30	2	intron_retention	FALSE	canonical	3	204	junction_20	33.8002958566933	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2208	False	NA	25	True	AATAAA	-17	NA	137627406	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.17	chr5	+	3148	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	234	junction_8	21.2704864483631	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGTGCCTGCCTGTCC	2209	False	NA	30	True	AATAAA	-32	NA	137627407	137639361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637918_137638209
ES.27524.18	chr5	+	3029	18	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	70.252436571913	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCCTCAGGTGTGTGC	2209	False	NA	20	True	AATAAA	-22	NA	137627407	137639351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636935_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.19	chr5	+	4983	20	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	204	junction_19	34.1404139845435	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTCTGCAGTG	2211	False	NA	20	True	AATAAA	-12	NA	137627409	137641158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.2	chr5	+	4616	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	-99	-53	-99	53	multi-exon	FALSE	canonical	3	204	junction_21	33.9740463834439	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTCTTCCTCCAGG	2139	False	NA	76	True	NA	NA	NA	137627337	137641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.20	chr5	+	3339	17	ISM	ENSMUSG00000093445.8	ENSMUST00000176667.8	2209	18	-23	2	3	-2	intron_retention	FALSE	canonical	3	234	junction_8	20.4503018009515	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGTGCCTGCCTGT	2218	False	NA	28	True	AATAAA	-30	NA	137627416	137639359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839
ES.27524.21	chr5	+	3158	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	3	2	intron_retention	FALSE	canonical	3	234	junction_8	21.2425538424644	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTGTGTGCCTGCCTG	2218	False	NA	27	True	AATAAA	-29	NA	137627416	137639358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.22	chr5	+	4662	20	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-20	3	intron_retention	FALSE	canonical	3	204	junction_19	30.6396263619697	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	2218	False	NA	26	True	AATAAA	-18	NA	137627416	137641164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640497_137640602_137640701_137640784
ES.27524.23	chr5	+	4404	22	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-20	2	intron_retention	FALSE	canonical	1	4	junction_4	66.4206685860621	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2218	False	NA	25	True	AATAAA	-17	NA	137627416	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635082_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.24	chr5	+	4523	24	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	86.5852727188397	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2218	False	NA	23	True	AATAAA	-15	NA	137627416	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137629048_137629253_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.25	chr5	+	4503	22	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-19	0	intron_retention	FALSE	non_canonical	0	0	junction_13	87.221276191123	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2219	False	NA	23	True	AATAAA	-15	NA	137627417	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636903_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640164_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.26	chr5	+	3116	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	257	junction_14	16.2978861742865	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTCCTCAGGTGTGTG	2230	False	NA	19	True	AATAAA	-21	NA	137627428	137639350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.27	chr5	+	4210	23	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	83.453159029878	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2240	False	NA	25	True	AATAAA	-17	NA	137627438	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635082_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137639819_137639990_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.28	chr5	+	4379	21	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	3	2	intron_retention	FALSE	canonical	3	11	junction_13	65.693911437819	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2241	False	NA	25	True	AATAAA	-17	NA	137627439	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.29	chr5	+	2970	18	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	69.1498548237473	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGTGCCTGCCTGT	2243	False	NA	28	True	AATAAA	-30	NA	137627441	137639359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632186_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.3	chr5	+	3871	13	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	-8	2	intron_retention	FALSE	canonical	3	234	junction_7	21.4644408783975	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTGTGTGCCTGCCTG	2176	False	NA	27	True	AATAAA	-29	NA	137627374	137639358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635360_137635474_137635575_137635806_137635898_137635987_137636229_137636327_137636445_137636554_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.30	chr5	+	3018	18	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	70.6572211919942	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTTGGTCCTCAGGTG	2243	False	NA	15	True	AATAAA	-17	NA	137627441	137639346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636545_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.32	chr5	+	4835	20	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	5	2	intron_retention	FALSE	canonical	3	204	junction_19	31.0277331045413	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2243	False	NA	25	True	AATAAA	-17	NA	137627441	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137640079_137640171_137640497_137640602_137640701_137640784
ES.27524.34	chr5	+	3116	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	2	-12	intron_retention	FALSE	canonical	3	234	junction_7	20.8742514835862	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGGTTGGTCCTCAGG	2243	False	NA	13	True	AATAAA	-15	NA	137627441	137639344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.35	chr5	+	2287	15	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	2	262	intron_retention	FALSE	canonical	1	3	junction_1	98.87788799673	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTGCGTGTGT	2243	False	NA	27	True	TATAAA	-15	NA	137627441	137638763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137637383_137637461_137637611_137637918_137638209
ES.27524.37	chr5	+	3254	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	2	-2	intron_retention	FALSE	canonical	3	234	junction_7	20.6424168885332	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGTGCCTGCCTGT	2243	False	NA	28	True	AATAAA	-30	NA	137627441	137639359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.38	chr5	+	4565	21	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	204	junction_20	32.3055335817256	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2243	False	NA	23	True	AATAAA	-15	NA	137627441	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640701_137640784
ES.27524.39	chr5	+	3642	22	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_17	66.6213791756468	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2243	False	NA	23	True	AATAAA	-15	NA	137627441	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137639026_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.4	chr5	+	2993	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	69.3322785126091	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGTGTGCCTGCCTGT	2188	False	NA	28	True	AATAAA	-30	NA	137627386	137639359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.40	chr5	+	5805	13	Fusion	ENSMUSG00000093445.8_ENSMUSG00000079165.11	novel	3078	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	204	junction_12	30.2609025348257	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2243	False	NA	23	True	AATAAA	-15	NA	137627441	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635898_137635987_137636065_137636166_137636229_137636327_137637750_137637839_137637918_137638209_137640701_137640784
ES.27524.41	chr5	+	3307	16	NNC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_9	73.9226622897201	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGTGCCTGCCTGTCC	2244	False	NA	30	True	AATAAA	-32	NA	137627442	137639361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636301_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637918_137638209
ES.27524.42	chr5	+	4438	22	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	9	-5	intron_retention	FALSE	canonical	1	3	junction_5	66.9209097611898	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACCAGGCTGTCTGCAG	2247	False	NA	18	True	AATAAA	-10	NA	137627445	137641156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635258_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.43	chr5	+	4095	21	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	4462	0	intron_retention	FALSE	canonical	1	4	junction_2	67.0719017174852	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	1029	False	NA	23	True	AATAAA	-15	NA	137631898	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137631979_137632110_137632186_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.44	chr5	+	1361	10	ISM	ENSMUSG00000093445.8	ENSMUST00000175968.8	2036	18	7595	-321	-595	262	3prime_fragment	FALSE	canonical	3	257	junction_7	17.4532886285255	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTGCGTGTGT	2416	False	NA	27	True	TATAAA	-15	NA	137635986	137638763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.45	chr5	+	3001	12	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	9141	-3	intron_retention	FALSE	canonical	0	0	junction_7	85.5888692848232	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTCTGCAGTG	3007	False	NA	20	True	AATAAA	-12	NA	137636577	137641158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137639352_137639461_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.46	chr5	+	4144	2	ISM	ENSMUSG00000093445.8_ENSMUSG00000079165.11	ENSMUST00000176871.2	237	4	290	-3541	290	2	3prime_fragment	FALSE	canonical	3	257	junction_1	0	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGCAGTGGGACATGG	90	False	NA	28	True	AATAAA	-20	NA	137636871	137641166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137637461_137637611
ES.27524.47	chr5	+	1113	6	NNC	ENSMUSG00000079165.11	novel	1005	6	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	86.5461726478993	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	1068	False	NA	25	True	AATAAA	-17	NA	137639562	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137639819_137639941_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.48	chr5	+	1114	6	NNC	ENSMUSG00000079165.11	novel	1005	6	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	85.7540669589495	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	1078	False	NA	25	True	AATAAA	-17	NA	137639572	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137639819_137639930_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.49	chr5	+	1031	6	NNC	ENSMUSG00000079165.11	novel	1005	6	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	81.7958434151761	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	1087	False	NA	25	True	AATAAA	-17	NA	137639581	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137639819_137640004_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.5	chr5	+	4755	20	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-50	0	intron_retention	FALSE	canonical	3	204	junction_19	35.3139461437513	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2188	False	NA	23	True	AATAAA	-15	NA	137627386	137641161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.6	chr5	+	2397	17	NIC	ENSMUSG00000093445.8	novel	3078	18	NA	NA	4	262	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	69.3322785126091	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTGCGTGTGT	2188	False	NA	27	True	TATAAA	-15	NA	137627386	137638763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27524.7	chr5	+	4659	23	NNC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-50	66	intron_retention	FALSE	canonical	0	0	junction_4	85.0384453649209	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCCTCCTTACTCAT	2188	False	NA	89	True	NA	NA	NA	137627386	137641227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137634446_137634526_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.8	chr5	+	4343	23	NIC	ENSMUSG00000029720.10	novel	4464	22	NA	NA	-42	2	combination_of_known_splicesites	FALSE	canonical	3	122	junction_18	45.8170093645083	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTCTGCAGTGGGACA	2196	False	NA	25	True	AATAAA	-17	NA	137627394	137641163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ES.27524.9	chr5	+	2477	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	13	588	-9	267	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCGTGTGTGAGCT	2197	False	NA	32	True	TATAAA	-20	NA	137627395	137638768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ES.27525.1	chr5	-	1475	9	Fusion	ENSMUSG00000089984.8_ENSMUSG00000029718.15	novel	1626	9	NA	NA	-9	1	multi-exon	FALSE	canonical	3	12	junction_8	182.004764704114	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGTCTGAGGTTCTGTG	1739	False	NA	-1	True	AATAAA	-22	NA	137612033	137603363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137611934
ES.27525.10	chr5	-	1123	7	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	-612	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	260.981108298836	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	6706	False	NA	-6	True	AATAAA	-17	NA	137607066	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605739_137606216_137606342_137606878
ES.27525.11	chr5	-	864	6	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	-478	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	232.852399601121	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	6840	False	NA	-6	True	AATAAA	-17	NA	137606932	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605739_137606878
ES.27525.12	chr5	-	5682	7	Fusion	ENSMUSG00000089984.8_ENSMUSG00000029718.15	novel	1626	9	NA	NA	50	1	intron_retention	FALSE	canonical	1	5	junction_6	211.607340767438	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	1798	False	NA	-6	True	AATAAA	-17	NA	137611974	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137606342_137607152_137611382_137611934
ES.27525.13	chr5	-	1485	8	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	196.955190179836	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	-11	True	NA	-6	True	AATAAA	-17	NA	137608949	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605739_137606216_137606342_137607152_137607412_137608658
ES.27525.15	chr5	-	2277	8	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	9	1	intron_retention	FALSE	canonical	2	3	junction_5	212.883411610148	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	4111	False	NA	-6	True	AATAAA	-17	NA	137609661	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605739_137606216_137607412_137608658_137608768_137609498
ES.27525.17	chr5	-	1024	7	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	-509	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	213.178654862275	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGATCGTGTCTGAGGT	6809	False	NA	-7	True	AATAAA	-16	NA	137606963	137603369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606941
ES.27525.18	chr5	-	4234	5	NIC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	16	0	intron_retention	FALSE	canonical	3	423	junction_4	79.9781220084593	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGATCGTGTCTGAGGT	-10	True	NA	-7	True	AATAAA	-16	NA	137608948	137603369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137603580_137603718_137603890_137603984_137605370_137605669_137606342_137607152
ES.27525.19	chr5	-	9599	11	Fusion	ENSMUSG00000089984.8_ENSMUSG00000029718.15	novel	2306	10	NA	NA	-2186	0	intron_retention	FALSE	non_canonical	0	0	junction_3	268.161816819621	261	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGATCGTGTCTGAGGT	NA	False	NA	-7	True	AATAAA	-16	NA	137629450	137603369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137603580_137603718_137603890_137603984_137604101_137604284_137605370_137605669_137612106_137616645_137616778_137616981_137617104_137617846_137618006_137619467_137620275_137622754_137622851_137629185
ES.27525.20	chr5	-	3169	8	NNC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	-6	0	intron_retention	TRUE	non_canonical	0	0	junction_3	210.443360938912	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGATCGTGTCTGAGGT	4128	False	NA	-7	True	AATAAA	-16	NA	137609644	137603369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604101_137604284_137605370_137605669_137605807_137606216_137607412_137608658_137608768_137609498
ES.27525.21	chr5	-	3601	7	NNC	ENSMUSG00000029718.15	novel	2573	8	NA	NA	54	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	210.357631982615	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATCGTGTCTGAGG	4862	False	NA	-8	True	AATAAA	-15	NA	137608910	137603370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604101_137604284_137605370_137605669_137605807_137606216_137606342_137607152
ES.27525.22	chr5	-	4350	5	NNC	ENSMUSG00000029718.15	novel	2573	8	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	245.516292738384	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATCGTGTCTGAGG	-11	True	NA	-8	True	AATAAA	-15	NA	137608949	137603370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604101_137604284_137606342_137607152
ES.27525.23	chr5	-	2997	6	NIC	ENSMUSG00000029718.15	novel	2573	8	NA	NA	5	-1	intron_retention	FALSE	canonical	3	423	junction_4	74.60991891163	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATCGTGTCTGAGG	4813	False	NA	-8	True	AATAAA	-15	NA	137608959	137603370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137603580_137603718_137603890_137603984_137605370_137605669_137606342_137607152_137607412_137608658
ES.27525.25	chr5	-	1909	7	NIC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	64	-4	intron_retention	FALSE	canonical	3	423	junction_5	68.5405395044098	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAAGGGATCGTGTCTG	4872	False	NA	-11	True	AATAAA	-12	NA	137608900	137603373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137606342_137607152_137607412_137608658
ES.27525.26	chr5	-	2122	9	NNC	ENSMUSG00000089984.8	novel	2161	10	NA	NA	-2208	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.61535599791501	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGTTTTGAAACCCTG	NA	False	NA	NA	False	AATAAA	-12	NA	137629472	137610766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137611382_137611934_137612106_137616645_137616778_137616981_137617170_137617846_137618006_137619467_137619703_137620035_137620275_137622754_137622851_137629185
ES.27525.3	chr5	-	5281	17	Fusion	ENSMUSG00000089984.8_ENSMUSG00000029718.15	novel	1626	9	NA	NA	221	0	intron_retention	TRUE	canonical	0	0	junction_9	259.944916039918	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	1955	False	NA	-2	True	AATAAA	-21	NA	137623119	137603364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498_137612106_137616645_137616778_137616981_137617170_137617846_137618006_137619467_137619703_137620035_137620275_137622481_137622666_137622754_137622851_137623053
ES.27525.4	chr5	-	4003	6	NIC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	231	junction_5	142.832209252675	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	4112	False	NA	-4	True	AATAAA	-19	NA	137609660	137603366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137608768_137609498
ES.27525.5	chr5	-	3428	18	Fusion	ENSMUSG00000089984.8_ENSMUSG00000029718.15	novel	2306	10	NA	NA	-2194	0	multi-exon	FALSE	canonical	0	0	junction_10	264.287001907325	261	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	NA	False	NA	-4	True	AATAAA	-19	NA	137629458	137603366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137610937_137611382_137611934_137612106_137616645_137616778_137616981_137617104_137617846_137618006_137619467_137619703_137620035_137620275_137622481_137622666_137622754_137622851_137629185
ES.27525.6	chr5	-	1152	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2612	-2	-572	-1	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCGTGTCTGAGGTTC	6746	False	NA	-5	True	AATAAA	-18	NA	137607026	137603367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
ES.27525.7	chr5	-	2559	8	FSM	ENSMUSG00000029718.15	ENSMUST00000128755.8	2573	8	10	4	10	1	multi-exon	FALSE	canonical	3	231	junction_7	121.856724166087	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	4112	False	NA	-6	True	AATAAA	-17	NA	137609660	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137603580_137603718_137603890_137603984_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
ES.27525.8	chr5	-	1343	8	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	194.66307889714	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	5026	False	NA	-6	True	AATAAA	-17	NA	137608746	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605676_137605807_137606216_137606342_137607152_137607412_137608658
ES.27525.9	chr5	-	2760	7	NIC	ENSMUSG00000029718.15	novel	1585	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	231	junction_6	130.534052602717	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATCGTGTCTGAGGTT	4106	False	NA	-6	True	AATAAA	-17	NA	137609666	137603368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137607412_137608658_137608768_137609498
ES.27526.1	chr5	-	2283	1	NIC	ENSMUSG00000047182.7	novel	1281	3	NA	NA	223	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTTGCTCAATGGATC	6988	False	NA	NA	False	ATTAAA	-17	NA	137643576	137641293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137641300_137643600
ES.27527.1	chr5	+	307	1	Intergenic	novelGene_22930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGCAAGAAAGAGTATT	NA	False	NA	NA	False	NA	NA	NA	137659048	137659355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137659000_137659400
ES.27528.1	chr5	+	180	1	Intergenic	novelGene_22933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCAAATATACCCT	NA	False	NA	NA	False	NA	NA	NA	137677393	137677573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137677400_137677600
ES.27529.1	chr5	-	2761	11	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	44.2361842839095	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1767	False	NA	NA	False	NA	NA	NA	137682985	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.11	chr5	-	4088	12	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	35	junction_6	32.7520108524047	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1771	False	NA	NA	False	NA	NA	NA	137682981	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.12	chr5	-	4585	11	NNC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_10	44.4590823117167	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1797	False	NA	NA	False	NA	NA	NA	137682955	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682838
ES.27529.13	chr5	-	2905	13	NNC	ENSMUSG00000029722.16	novel	2858	13	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	54.3631692110262	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1789	False	NA	NA	False	NA	NA	NA	137682963	137648744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659779_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.14	chr5	-	2533	12	NNC	ENSMUSG00000029722.16	novel	2858	13	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	60.0424092545503	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1790	False	NA	NA	False	NA	NA	NA	137682962	137648744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682838
ES.27529.16	chr5	-	4127	11	NIC	ENSMUSG00000029722.16	novel	2858	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	35	junction_5	33.3198139250507	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	1820	False	NA	NA	False	NA	NA	NA	137682932	137648746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653675_137653869_137653991_137658423_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.17	chr5	-	2842	13	NNC	ENSMUSG00000029722.16	novel	2858	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.0461296449522	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	1789	False	NA	NA	False	NA	NA	NA	137682963	137648746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659752_137661731_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.18	chr5	-	2386	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	-5	512	-5	-116	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACCGCTGGCCATTCTT	1759	False	NA	NA	False	NA	NA	NA	137682993	137649236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.19	chr5	-	2405	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-39	492	7	-118	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACCGCTGGCCATTC	1771	False	NA	NA	False	NA	NA	NA	137682981	137649238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.2	chr5	-	2671	12	NNC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	42.4287443498796	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1768	False	NA	NA	False	NA	NA	NA	137682984	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682838
ES.27529.20	chr5	-	4405	10	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-6	-118	intron_retention	FALSE	canonical	3	93	junction_5	18.0431581369658	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACCGCTGGCCATTC	1791	False	NA	NA	False	NA	NA	NA	137682961	137649238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653675_137653869_137653991_137659625_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.21	chr5	-	1846	10	NNC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-8	-124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.3973194040638	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATAAACACCGCTGG	1789	False	NA	NA	False	NA	NA	NA	137682963	137649244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659752_137661697_137661867_137662477_137662621_137682895
ES.27529.22	chr5	-	2218	11	NIC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-7	-124	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	44.2361842839095	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATAAACACCGCTGG	1790	False	NA	NA	False	NA	NA	NA	137682962	137649244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.23	chr5	-	1700	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-51	1209	-5	-835	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTGGTGACCATTTG	1759	False	NA	NA	False	NA	NA	NA	137682993	137649955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.24	chr5	-	1636	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	26	1231	-7	-835	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTGGTGACCATTTG	1790	False	NA	NA	False	NA	NA	NA	137682962	137649955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.25	chr5	-	2729	4	NIC	ENSMUSG00000029722.16	novel	1497	5	NA	NA	5	626	intron_retention	FALSE	canonical	3	124	junction_2	9.2736184954957	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCACCAAAACCAGTTTG	1802	False	NA	NA	False	NA	NA	NA	137682950	137660445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.26	chr5	-	2089	5	FSM	ENSMUSG00000029722.16	ENSMUST00000138604.2	1497	5	2	-594	2	594	multi-exon	FALSE	canonical	3	124	junction_3	10.3289641300568	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	1799	False	NA	NA	False	NA	NA	NA	137682953	137660477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.27	chr5	-	1879	5	NNC	ENSMUSG00000029722.16	novel	1497	5	NA	NA	-7	593	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	59.4537635478192	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAAAAAAACAA	1790	False	NA	NA	False	NA	NA	NA	137682962	137660478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682838
ES.27529.28	chr5	-	173	1	Intergenic	novelGene_22931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAAAAAGTGTTT	8505	False	NA	NA	False	NA	NA	NA	137661068	137660895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137660900_137661100
ES.27529.29	chr5	-	177	1	Intergenic	novelGene_22932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAGAAAGTACCG	5048	False	NA	NA	False	NA	NA	NA	137664525	137664348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137664300_137664500
ES.27529.3	chr5	-	3045	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	-165	-22	-119	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1645	False	NA	NA	False	NA	NA	NA	137683107	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.4	chr5	-	2899	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1758	False	NA	NA	False	NA	NA	NA	137682994	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.5	chr5	-	4065	12	NNC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_11	50.154801686692	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1787	False	NA	NA	False	NA	NA	NA	137682965	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682627
ES.27529.7	chr5	-	2882	12	NNC	ENSMUSG00000029722.16	novel	2893	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	42.7516371539014	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1799	False	NA	NA	False	NA	NA	NA	137682953	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659779_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ES.27529.9	chr5	-	2622	13	Fusion	ENSMUSG00000045348.17_ENSMUSG00000029722.16	novel	2858	13	NA	NA	8924	0	multi-exon	FALSE	canonical	0	0	junction_12	54.5494169436199	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	137729056	137648724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137728992
ES.2753.1	chr10	+	5231	1	Intergenic	novelGene_2096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46689892	46695123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_46689900_46695100
ES.27530.1	chr5	-	3438	7	NNC	ENSMUSG00000045348.17	novel	2499	6	NA	NA	-251	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.6141675934562	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	7867	False	NA	-1	True	ATTAAA	-16	NA	137740120	137729143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738079_137740079
ES.27530.2	chr5	-	3513	7	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-78	31	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	6.97017455544216	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTCTTCTTATATCCC	8545	False	NA	-1	True	ATTAAA	-16	NA	137739442	137729143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137739312
ES.27530.3	chr5	-	3442	7	NNC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-270	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.6141675934562	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTCTTCTTATATCC	7848	False	NA	-2	True	ATTAAA	-15	NA	137740139	137729144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137740079
ES.27530.4	chr5	-	3448	7	NNC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-205	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.6141675934562	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTCTTCTTATATCC	7913	False	NA	-2	True	ATTAAA	-15	NA	137740074	137729144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137737912_137738065_137740008
ES.27530.5	chr5	-	3139	6	NIC	ENSMUSG00000045348.17	novel	3912	7	NA	NA	-53	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	12.0233106921513	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTGTCTTCTTATATC	8570	False	NA	-3	True	ATTAAA	-14	NA	137739417	137729145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137737912_137738065_137739312
ES.27530.6	chr5	-	3293	6	NIC	ENSMUSG00000045348.17	novel	2499	6	NA	NA	-68	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	12.595237195067	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTTTTTAAATTCCTT	8555	False	NA	-59	True	TTTAAA	-28	NA	137739432	137729201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137730196_137731312_137731423_137731977_137732185_137733101_137734617_137736070_137736418_137739312
ES.27531.1	chr5	+	2591	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	-269	1661	-3	199	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGAGGTTGGTGTGCT	NA	False	NA	11	True	ATTAAA	-22	NA	137743988	137758009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
ES.27531.10	chr5	+	274	1	Intergenic	novelGene_22935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCCAGCAACCACATGG	486	False	NA	NA	False	NA	NA	NA	137748210	137748484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137748200_137748500
ES.27531.11	chr5	+	174	1	Intergenic	novelGene_22937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	2547	False	NA	NA	False	NA	NA	NA	137764244	137764418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137764200_137764400
ES.27531.2	chr5	+	2008	4	NIC	ENSMUSG00000029723.17	novel	3983	5	NA	NA	129	175	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	167.810077832716	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCTGAAGAAA	NA	False	NA	-13	True	NA	NA	NA	137744386	137757985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137744677_137745109_137746122_137756945_137756995_137757328
ES.27531.3	chr5	+	5647	6	NIC	ENSMUSG00000029723.17	novel	2730	6	NA	NA	130	4	intron_retention	FALSE	canonical	2	3	junction_5	144.697753956307	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTCTGTGGTCATGAA	NA	False	NA	NA	False	AATAAA	-21	NA	137744387	137766716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328_137760971_137766222
ES.27531.4	chr5	+	2620	4	NIC	ENSMUSG00000029723.17	novel	3983	5	NA	NA	133	197	intron_retention	FALSE	canonical	3	331	junction_1	27.9404127862612	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGGAGGTTGGTGTG	NA	False	NA	9	True	ATTAAA	-20	NA	137744390	137758007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137746122_137749469_137749631_137756945_137756995_137757328
ES.27531.5	chr5	+	2518	4	ISM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	138	1661	138	199	intron_retention	FALSE	canonical	3	319	junction_1	33.3599893418581	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGAGGTTGGTGTGCT	NA	False	NA	11	True	ATTAAA	-22	NA	137744395	137758009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945
ES.27531.6	chr5	+	2174	6	NNC	ENSMUSG00000029723.17	novel	3983	5	NA	NA	174	1988	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	145.873095531698	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGCAAAATTAGTAACATT	NA	False	NA	NA	False	NA	NA	NA	137744431	137768700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328_137758004_137768668
ES.27531.7	chr5	+	1993	5	NNC	ENSMUSG00000029723.17	novel	402	2	NA	NA	569	199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.031632714109	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGAGGTTGGTGTGCT	NA	False	NA	11	True	ATTAAA	-22	NA	137744826	137758009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137744917_137745109_137746122_137749469_137749631_137756945_137756995_137757328
ES.27531.8	chr5	+	943	4	NNC	ENSMUSG00000029723.17	novel	402	2	NA	NA	2489	199	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	175.655597374205	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGAGGTTGGTGTGCT	51	False	NA	11	True	ATTAAA	-22	NA	137746746	137758009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137746799_137749469_137749631_137756945_137756995_137757328
ES.27531.9	chr5	+	391	1	Intergenic	novelGene_22934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	485	False	NA	NA	False	NA	NA	NA	137748209	137748600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137748200_137748600
ES.27532.1	chr5	-	189	1	Intergenic	novelGene_22936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCCAGTACAGGGGAAT	NA	False	NA	0	True	NA	NA	NA	137762043	137761854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137761900_137762000
ES.27533.1	chr5	-	231	1	Intergenic	novelGene_22938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGTAGTTGTGCACACC	NA	False	NA	NA	False	AAGAAA	-24	NA	137769830	137769599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_137769600_137769800
ES.27534.1	chr5	+	710	4	NIC	ENSMUSG00000029725.11	novel	430	3	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	179.735608294208	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTACCGAACTGTTCT	NA	False	NA	0	True	AATAAA	-13	NA	137777082	137778367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137777160_137777563_137777808_137777887_137778025_137778115
ES.27534.10	chr5	+	643	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	390	3	-143	1	3prime_fragment	FALSE	canonical	3	393	junction_2	18	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777555	137778369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137777808_137777887_137778025_137778115
ES.27534.2	chr5	+	767	3	FSM	ENSMUSG00000029725.11	ENSMUST00000126126.8	430	3	4	-341	4	-3	multi-exon	FALSE	canonical	3	31	junction_1	199	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAATTACCGAACTGTT	NA	False	NA	-2	True	AATAAA	-11	NA	137777114	137778365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137777160_137777563_137777808_137777887
ES.27534.3	chr5	+	1136	2	FSM	ENSMUSG00000029725.11	ENSMUST00000152298.2	476	2	-658	-2	-18	2	multi-exon	FALSE	canonical	3	393	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAACTGTTCTTGGGAGT	NA	False	NA	7	True	AATAAA	-20	NA	137777147	137778374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137778025_137778115
ES.27534.4	chr5	+	970	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	-17	3	-17	1	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777148	137778369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
ES.27534.5	chr5	+	791	3	NNC	ENSMUSG00000029725.11	novel	956	4	NA	NA	-2	1	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	192	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777163	137778369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137777564_137777887_137778025_137778115
ES.27534.6	chr5	+	1195	1	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	10	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCGAACTGTTCTTGG	NA	False	NA	3	True	AATAAA	-16	NA	137777175	137778370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137777200_137778400
ES.27534.7	chr5	+	1033	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	11	3	11	1	intron_retention	FALSE	canonical	3	301	junction_1	64	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777176	137778369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137777484_137777563_137777808_137777887
ES.27534.9	chr5	+	961	3	NNC	ENSMUSG00000029725.11	novel	956	4	NA	NA	28	1	intron_retention	FALSE	canonical	1	4	junction_1	194.5	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	False	NA	2	True	AATAAA	-15	NA	137777193	137778369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137777440_137777563_137778025_137778115
ES.27535.1	chr5	-	4237	3	ISM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	3	0	3	0	intron_retention	FALSE	canonical	3	137	junction_2	15	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	2729	False	NA	-6	True	AATAAA	-29	NA	137784922	137780167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_137780747_137780856_137780984_137781391
ES.27535.2	chr5	-	3190	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	-62	0	-10	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	2664	False	NA	-6	True	AATAAA	-29	NA	137784987	137780167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
ES.27535.3	chr5	-	2923	3	NIC	ENSMUSG00000029726.17	novel	3128	4	NA	NA	314	-1	intron_retention	FALSE	canonical	3	137	junction_1	7.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCAGCACTTTCT	3040	False	NA	-7	True	AATAAA	-28	NA	137784611	137780168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_137780984_137781391_137781611_137782722
ES.27535.4	chr5	-	2890	5	NNC	ENSMUSG00000029726.17	novel	3128	4	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.6670833320313	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCCCCGCACCTGTGT	2697	False	NA	-19	True	AATAAA	-16	NA	137784954	137780180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722_137783183_137783436
ES.27536.1	chr5	+	2255	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	-38	5	-38	-5	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCTGTGCTTTGTGTG	7039	False	NA	27	True	AATAAA	-20	NA	137786021	137820878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.10	chr5	+	2065	16	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	57	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	32.1286303612353	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACTCCTGAGCTGTGC	7134	False	NA	19	True	AATAAA	-12	NA	137786116	137820870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799238_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.11	chr5	+	242	1	Intergenic	novelGene_22939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGAGGGAATAGGG	899	False	NA	NA	False	AATAAA	-7	NA	137788761	137789003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_137788800_137789000
ES.27536.12	chr5	+	7178	11	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	98	-14	intron_retention	FALSE	canonical	3	75	junction_1	9.55039266208463	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTACTCCTGAGCTGTG	9686	False	NA	18	True	AATAAA	-11	NA	137797548	137820869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.13	chr5	+	5056	10	ISM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	18477	8	-4554	-8	3prime_fragment	FALSE	canonical	3	70	junction_4	11.960841458487	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGCTGTGCTTTGT	NA	False	NA	24	True	AATAAA	-17	NA	137804536	137820875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.2	chr5	+	1911	7	ISM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	-16	20529	-16	1031	5prime_fragment	FALSE	canonical	3	53	junction_4	11.4455231422596	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTGTCTATATGTACA	7061	False	NA	NA	False	AATAAA	-17	NA	137786043	137800354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235
ES.27536.3	chr5	+	3762	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	-14	-8	intron_retention	FALSE	canonical	3	62	junction_3	14.4612893231858	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGCTGTGCTTTGT	7063	False	NA	24	True	AATAAA	-17	NA	137786045	137820875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.4	chr5	+	3789	16	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	2	-15	intron_retention	FALSE	canonical	0	0	junction_4	26.0728892828462	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTACTCCTGAGCTGT	7079	False	NA	17	True	AATAAA	-10	NA	137786061	137820868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137797914_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.5	chr5	+	2318	18	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	30.9076087204528	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCCTGAGCTGTGCTTT	7082	False	NA	22	True	AATAAA	-15	NA	137786064	137820873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137816988_137817100_137817225_137817287_137817703_137817839_137820415
ES.27536.6	chr5	+	4122	15	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	9	-9	intron_retention	FALSE	canonical	3	62	junction_3	14.5918973881999	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTGAGCTGTGCTTTG	7086	False	NA	23	True	AATAAA	-16	NA	137786068	137820874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.7	chr5	+	2187	17	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	49	-13	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	24.7012619869917	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACTCCTGAGCTGTGC	7126	False	NA	19	True	AATAAA	-12	NA	137786108	137820870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.8	chr5	+	2255	18	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	56	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.4736117294174	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGAGCTGTGCTTTGT	7133	False	NA	24	True	AATAAA	-17	NA	137786115	137820875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137787906_137788004_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ES.27536.9	chr5	+	2440	12	NNC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	56	1977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.1884727614989	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAAGATCTATGCGTTG	7133	False	NA	NA	False	NA	NA	NA	137786115	137811851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137810667
ES.27537.1	chr5	-	3265	7	Antisense	novelGene_ENSMUSG00000037108.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	137811950	137796880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_137797864_137798247_137798403_137799232_137799357_137808275_137808392_137809071_137809195_137809835_137809911_137810261
ES.27538.1	chr5	+	3940	1	Intergenic	novelGene_22940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	138068151	138072091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138068200_138072100
ES.27539.1	chr5	+	8278	7	NNC	ENSMUSG00000029729.13	novel	8261	6	NA	NA	3	5900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4.69041575982343	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCTTTCTTCTTTAAG	NA	False	NA	NA	False	AAGAAA	-20	NA	138083348	138111984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851_138106083_138111962
ES.27539.10	chr5	+	7800	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	29	213	-7	-213	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCAGGCACTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	138083374	138105871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ES.27539.11	chr5	+	2759	3	NNC	ENSMUSG00000029729.13	novel	8042	4	NA	NA	-7	-142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGTAGAGAGACTGACA	NA	False	NA	NA	False	ATTAAA	-24	NA	138083374	138102611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138083494_138091181_138091545_138100334
ES.27539.12	chr5	+	4540	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	29	3473	-7	-142	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGTAGAGAGACTGACA	NA	False	NA	NA	False	ATTAAA	-24	NA	138083374	138102611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ES.27539.13	chr5	+	634	2	NNC	ENSMUSG00000029729.13	novel	8042	4	NA	NA	-5	-17656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGAGTCTTTTCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	138083376	138085097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138083494_138084580
ES.27539.14	chr5	+	8209	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	52	0	16	0	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTAAATCCTCATTT	NA	False	NA	4	True	NA	NA	NA	138083397	138106084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ES.27539.15	chr5	+	2303	1	FSM	ENSMUSG00000106102.2	ENSMUST00000199837.2	202	1	-2029	-72	-2029	72	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAGAGAGAGAGA	5490	False	NA	NA	False	AATAAA	-11	NA	138103139	138105442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138103100_138105400
ES.27539.16	chr5	+	3412	1	FSM	ENSMUSG00000106102.2	ENSMUST00000199837.2	202	1	4	-3214	4	3214	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTTATGCTATATGAA	1435	False	NA	NA	False	NA	NA	NA	138105172	138108584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138105200_138108600
ES.27539.17	chr5	+	179	1	Intergenic	novelGene_22944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGTTCCCTTAAAAA	4440	False	NA	NA	False	NA	NA	NA	138108177	138108356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138108200_138108400
ES.27539.2	chr5	+	2242	6	NNC	ENSMUSG00000029729.13	novel	8261	6	NA	NA	-17	2482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.11468474101777	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGTTTTTAAAACC	NA	False	NA	NA	False	NA	NA	NA	138083364	138108566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138107333
ES.27539.3	chr5	+	8236	6	NNC	ENSMUSG00000029729.13	novel	8261	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.11468474101777	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTAAATCCTCATTT	NA	False	NA	4	True	NA	NA	NA	138083364	138106084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095836_138098851
ES.27539.4	chr5	+	4911	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	19	3331	-17	0	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATGCACTCATTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	138083364	138102753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ES.27539.5	chr5	+	5159	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	19	2864	-17	466	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCCCTTCCTGGTCTCT	NA	False	NA	NA	False	ACTAAA	-15	NA	138083364	138103220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ES.27539.6	chr5	+	4866	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	21	3155	-15	175	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAGTACCTCGGTGTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	138083366	138102929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ES.27539.7	chr5	+	5078	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	21	3162	-15	168	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGAACACTGAGTACCTC	NA	False	NA	NA	False	AGTAAA	-21	NA	138083366	138102922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ES.27539.8	chr5	+	8017	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	25	0	-11	0	multi-exon	FALSE	canonical	2	3	junction_3	5.09901951359278	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTAAATCCTCATTT	NA	False	NA	4	True	NA	NA	NA	138083370	138106084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ES.27539.9	chr5	+	4756	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	29	3476	-7	-145	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGTAGAGAGACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	138083374	138102608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ES.2754.1	chr10	-	3554	1	Intergenic	novelGene_2097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46792652	46789098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_46789100_46792700
ES.27540.1	chr5	-	173	1	Intergenic	novelGene_22941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTCGAGATCAGG	NA	False	NA	NA	False	NA	NA	NA	138088853	138088680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138088700_138088900
ES.27541.1	chr5	-	191	1	Intergenic	novelGene_22942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTTTTACATTT	NA	False	NA	NA	False	NA	NA	NA	138090055	138089864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138089900_138090100
ES.27542.1	chr5	-	176	1	Intergenic	novelGene_22943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	138090238	138090062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138090100_138090200
ES.27543.1	chr5	-	4158	1	Antisense	novelGene_ENSMUSG00000029729.13_AS_novelGene_ENSMUSG00000106102.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAACAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138105249	138101091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_138101100_138105200
ES.27543.2	chr5	-	3283	1	Antisense	novelGene_ENSMUSG00000029729.13_AS_novelGene_ENSMUSG00000106102.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCCAACACAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	138105249	138101966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_138102000_138105200
ES.27544.1	chr5	+	2999	3	NIC	ENSMUSG00000037017.16	novel	2204	4	NA	NA	2	13	intron_retention	FALSE	canonical	3	48	junction_1	53.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGTGAGTGGATGATGT	NA	False	NA	68	True	TATAAA	-19	NA	138115179	138132540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138115270_138123239_138124909_138131300
ES.27544.10	chr5	+	2151	4	NNC	ENSMUSG00000037017.16	novel	2252	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.3045398018128	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115193	138132475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138115251_138123226_138123953_138124715_138124909_138131300
ES.27544.11	chr5	+	3577	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-5	-1368	-5	1368	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGTGGTGATGGTACT	NA	False	NA	NA	False	NA	NA	NA	138115193	138133895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
ES.27544.12	chr5	+	3047	4	NIC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	61	junction_1	38.5169515350781	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTTATGTATTT	NA	False	NA	47	True	GATAAA	-13	NA	138115195	138132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138115270_138116097_138116183_138123239_138124909_138131300
ES.27544.13	chr5	+	2372	6	NNC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.616616063458	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115197	138132475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138115270_138116097_138116183_138121114_138121249_138123239_138123953_138124715_138124909_138131300
ES.27544.15	chr5	+	2293	6	NIC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.4417741708836	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTCTCAGGACTGTTATT	NA	False	NA	7	True	AATAAA	-16	NA	138115226	138132479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138115270_138116097_138116183_138117911_138117992_138123239_138123953_138124715_138124909_138131300
ES.27544.16	chr5	+	1607	5	NNC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.9057250900099	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTCTCAGGACTGTTAT	NA	False	NA	6	True	AATAAA	-15	NA	138115245	138132478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300_138131568_138132068
ES.27544.17	chr5	+	1968	1	Intergenic	novelGene_22945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3321	False	NA	NA	False	NA	NA	NA	138120269	138122237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138120300_138122200
ES.27544.18	chr5	+	5728	1	NIC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	11446	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	9800	False	NA	4	True	AATAAA	-13	NA	138126748	138132476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138126700_138132500
ES.27544.2	chr5	+	2298	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	3	9	3	-9	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTTTTATGTATT	NA	False	NA	46	True	GATAAA	-12	NA	138115180	138132518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ES.27544.3	chr5	+	2214	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	-18	8	3	-8	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTTATGTATTT	NA	False	NA	47	True	GATAAA	-13	NA	138115180	138132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
ES.27544.4	chr5	+	1542	4	NIC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	63.754738385995	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115180	138132475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138115270_138116097_138116183_138124715_138124909_138131300
ES.27544.5	chr5	+	2151	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	-18	1	3	0	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115180	138132475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
ES.27544.6	chr5	+	2280	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	16	-44	3	-8	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTTTTATGTATTT	NA	False	NA	47	True	GATAAA	-13	NA	138115180	138132519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ES.27544.8	chr5	+	3768	5	NNC	ENSMUSG00000037017.16	novel	2310	5	NA	NA	-10	-3164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	58.5790064784305	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGCCTTGGTCATCG	NA	False	NA	NA	False	NA	NA	NA	138115188	138128345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138125360_138126100
ES.27544.9	chr5	+	2796	4	NNC	ENSMUSG00000037017.16	novel	754	4	NA	NA	-9	-3166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.9775360027417	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGATTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	138115189	138128343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138115270_138116097_138116183_138123239_138123664_138126136
ES.27545.1	chr5	+	2990	1	Antisense	novelGene_ENSMUSG00000037007.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTGTACTATAAACTG	NA	False	NA	NA	False	AATAAA	-21	NA	138135436	138138426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_138135400_138138400
ES.27546.1	chr5	+	178	1	Antisense	novelGene_ENSMUSG00000037007.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	138140688	138140866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_138140700_138140900
ES.27547.1	chr5	-	4696	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	25	1749	-15	-1749	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAGGAAGG	1736	False	NA	NA	False	NA	NA	NA	138153981	138139712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ES.27547.2	chr5	-	4599	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	6	1865	6	-1865	multi-exon	FALSE	canonical	3	14	junction_2	1.4790199457749	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	1717	False	NA	NA	False	NA	NA	NA	138154000	138139828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ES.27547.3	chr5	-	4406	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	-1	2065	-1	-2065	multi-exon	FALSE	canonical	3	14	junction_2	1.4790199457749	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTTGCTTTTATTTGT	1710	False	NA	NA	False	NA	NA	NA	138154007	138140028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ES.27547.4	chr5	-	3086	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	-13	3397	-13	1568	multi-exon	FALSE	canonical	3	14	junction_2	1.4790199457749	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATCAGTGGGTAC	1698	False	NA	NA	False	ACTAAA	-15	NA	138154019	138141360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ES.27547.5	chr5	-	3087	5	NNC	ENSMUSG00000037007.18	novel	6470	5	NA	NA	6	1560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.22409163839994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGCTCTTGTGTATCA	1717	False	NA	NA	False	ACTAAA	-7	NA	138154000	138141368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153863
ES.27547.6	chr5	-	1530	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	26	4914	-14	51	multi-exon	FALSE	canonical	3	14	junction_2	1.4790199457749	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTGCGTCCACAGAGC	1737	False	NA	NA	False	CATAAA	-12	NA	138153980	138142877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ES.27548.1	chr5	-	230	1	Intergenic	novelGene_22946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATTTATTTTTTTGT	1013	False	NA	NA	False	AAAACA	-30	NA	138154704	138154474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138154500_138154700
ES.27548.2	chr5	-	156	2	Intergenic	novelGene_22947	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAATAAATCTTA	174	False	NA	NA	False	NA	NA	NA	138155543	138154546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138154653_138155493
ES.27548.3	chr5	-	377	1	Intergenic	novelGene_22948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTATTAAAATAATTTT	176	False	NA	NA	False	AATAAA	-5	NA	138155541	138155164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138155200_138155500
ES.27549.1	chr5	+	1917	7	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-6	18	intron_retention	FALSE	canonical	3	3954	junction_1	316.291883480363	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTCCTCTCAGGCACC	NA	False	NA	29	True	AATAAA	-30	NA	138159326	138162258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160647_138160996_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.10	chr5	+	1781	8	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-8	2	intron_retention	FALSE	canonical	3	3954	junction_1	292.967435677324	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159353	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160488_138160583_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.11	chr5	+	1625	7	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-8	2	intron_retention	FALSE	canonical	3	3954	junction_1	341.267612488108	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159353	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160647_138160996_138161682_138161770_138161872_138161997
ES.27549.12	chr5	+	1113	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	-6	-9	-6	9	multi-exon	FALSE	canonical	3	173	junction_1	1439.16262518466	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGTGGCTTTGTCCTC	NA	False	NA	20	True	AATAAA	-21	NA	138159355	138162249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.13	chr5	+	1447	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-5	5	intron_retention	FALSE	canonical	3	3954	junction_1	301.302070188706	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	138159356	138162245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.16	chr5	+	1190	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	3954	junction_1	299.307299234416	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159359	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.18	chr5	+	1711	6	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	3954	junction_1	366.254883926481	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159359	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138161045_138161391_138161872_138161997
ES.27549.19	chr5	+	1108	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1485.26810149997	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	138159361	138162245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161984
ES.27549.2	chr5	+	1138	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	-5	654	-5	14	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTTGTCCTCTCAGG	NA	False	NA	25	True	AATAAA	-26	NA	138159327	138162254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.20	chr5	+	1753	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	29	5	0	-5	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGAATGAGATTTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	138159361	138162903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.21	chr5	+	1599	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1485.26810149997	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGAGATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	138159361	138162905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138162153
ES.27549.22	chr5	+	1092	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1493.25654564482	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGTGGCTTTGTCCTC	NA	False	NA	20	True	AATAAA	-21	NA	138159361	138162249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159643_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.25	chr5	+	2167	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1489.85457903336	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGTCCCTTTTCAC	NA	False	NA	NA	False	ATTAAA	-11	NA	138159361	138163315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160490_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.26	chr5	+	1229	9	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	0	-5	0	5	intron_retention	FALSE	canonical	3	173	junction_1	1517.15708131195	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	138159361	138162245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770
ES.27549.27	chr5	+	3068	6	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	410	intron_retention	FALSE	canonical	3	3954	junction_1	345.203360354444	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCCCTTTTCACCTA	NA	False	NA	NA	False	ATTAAA	-14	NA	138159361	138163318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160647_138160996_138161507_138161588_138161682_138161770
ES.27549.28	chr5	+	1104	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1471.49145804898	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159362	138162240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159920_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.3	chr5	+	1190	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	33	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	1484.9596411359	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCACACTGGTTTCTCAA	NA	False	NA	44	True	AATAAA	-45	NA	138159332	138162273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161959
ES.27549.30	chr5	+	1422	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	3954	junction_1	274.829691581896	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159362	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.31	chr5	+	1220	9	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	30	663	1	5	intron_retention	FALSE	canonical	3	3954	junction_1	301.471288019274	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	138159362	138162245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770
ES.27549.32	chr5	+	1788	8	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	3954	junction_1	319.496798233774	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159362	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.33	chr5	+	1180	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	3954	junction_1	297.147269884817	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159362	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161872_138161997
ES.27549.36	chr5	+	1519	8	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	2	2	intron_retention	FALSE	canonical	3	3954	junction_1	317.942492553966	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159363	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161682_138161770_138161872_138161997
ES.27549.39	chr5	+	1074	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1902.73949353213	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159371	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138160139_138160264_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.4	chr5	+	1143	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1480.25001224977	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159332	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161748_138161872_138161997
ES.27549.40	chr5	+	1211	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	75	501	-23	6	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTTCCAGTTTTTGT	NA	False	NA	15	True	NA	NA	NA	138159407	138162407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.5	chr5	+	1294	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-9	3	intron_retention	FALSE	canonical	3	4542	junction_3	156.115291931957	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTTCCAGTGGCTTT	NA	False	NA	14	True	AATAAA	-15	NA	138159352	138162243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.6	chr5	+	1877	7	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-8	2	intron_retention	FALSE	canonical	3	3954	junction_1	315.070582921069	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159353	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138159935_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.7	chr5	+	1607	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	21	159	-8	-159	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAAGGCCTTCTATCTC	NA	False	NA	NA	False	AAGAAA	-6	NA	138159353	138162749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.8	chr5	+	968	9	NIC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-8	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	1524.81357467069	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCCTTCCAGTGGCTT	NA	False	NA	13	True	AATAAA	-14	NA	138159353	138162242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138159445_138159636_138159760_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.27549.9	chr5	+	1093	10	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1468.94883051339	896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTCCAGTGGCTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	138159353	138162245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138159445_138159636_138159760_138159935_138160066_138160406_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ES.2755.1	chr10	+	158	1	Intergenic	novelGene_2098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47658792	47658950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_47658800_47659000
ES.27550.1	chr5	+	3863	1	Antisense	novelGene_ENSMUSG00000029730.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAATAAACA	2790	False	NA	NA	False	NA	NA	NA	138164976	138168839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_138165000_138168800
ES.27551.10	chr5	+	3739	14	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	21	-2	intron_retention	FALSE	canonical	3	48	junction_5	9.83713529281929	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTGGTGCATTCCTA	8164	False	NA	16	True	NA	NA	NA	138170350	138178689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.11	chr5	+	3402	15	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	51	-2	intron_retention	FALSE	canonical	1	5	junction_2	17.9092098072016	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTGGTGCATTCCTA	8194	False	NA	16	True	NA	NA	NA	138170380	138178689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138170742_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.12	chr5	+	5461	12	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	52	-8	intron_retention	FALSE	canonical	3	48	junction_3	10.6196449801362	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGGTATGGTGGTGCA	8195	False	NA	10	True	NA	NA	NA	138170381	138178683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.13	chr5	+	1953	14	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	57	3	intron_retention	FALSE	canonical	0	0	junction_10	19.6664493686387	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCCTCCTTCCTCC	8200	False	NA	16	True	AAAAAG	-15	NA	138170386	138176946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170511_138170610_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175424_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.14	chr5	+	3803	13	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	57	0	intron_retention	FALSE	canonical	3	48	junction_5	9.3348213099603	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	8200	False	NA	18	True	NA	NA	NA	138170386	138178691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.15	chr5	+	3673	10	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	57	-3	intron_retention	FALSE	canonical	1	1	junction_7	22.0806602155723	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGGTGGTGCATTCCT	8200	False	NA	15	True	NA	NA	NA	138170386	138178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138175417_138175463_138176184_138176443_138176538
ES.27551.16	chr5	+	3080	12	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	57	0	intron_retention	FALSE	non_canonical	0	0	junction_7	21.0552205889558	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCCTCCTTCCTCCCTC	8200	False	NA	19	True	AAAAAG	-18	NA	138170386	138176949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170511_138170610_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174638_138174681_138174981_138175078_138175174_138175417_138176236_138176330_138176443_138176538
ES.27551.17	chr5	+	5393	7	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	57	0	intron_retention	FALSE	non_canonical	0	0	junction_1	26.7394839142419	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCCTCCTTCCTCCCTC	8200	False	NA	19	True	AAAAAG	-18	NA	138170386	138176949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170511_138170606_138171156_138171233_138173123_138173205_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.18	chr5	+	3669	14	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	64	-28	intron_retention	FALSE	canonical	3	48	junction_6	9.87316007876042	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGGAATGATT	8207	False	NA	-10	True	NA	NA	NA	138170393	138178663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.19	chr5	+	3882	10	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	69	0	intron_retention	FALSE	canonical	3	48	junction_2	11.0128992829901	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTTTCCTCCTTCC	8212	False	NA	13	True	AAAAAG	-12	NA	138170398	138176943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.2	chr5	+	3355	14	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_1	24.9584269721286	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	8078	False	NA	18	True	NA	NA	NA	138170264	138178691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170335_138170445_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.20	chr5	+	1744	13	ISM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	462	1722	-118	20	3prime_fragment	FALSE	canonical	3	48	junction_4	10.0204651699521	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTTGTTTGAGTGTGTA	8539	False	NA	39	True	AAAAAG	-38	NA	138170725	138176969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.21	chr5	+	1305	11	NNC	ENSMUSG00000019518.12	novel	678	7	NA	NA	-118	-3	intron_retention	FALSE	canonical	1	1	junction_8	25.6085923080516	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAAAACCTTTCCTCCT	8539	False	NA	10	True	AAAAAG	-9	NA	138170725	138176940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170746_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138175417_138175463_138176184_138176443_138176538
ES.27551.22	chr5	+	3553	12	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	-112	-2	intron_retention	FALSE	canonical	3	48	junction_4	10.4105794886383	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTGGTGCATTCCTA	8545	False	NA	16	True	NA	NA	NA	138170731	138178689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.23	chr5	+	3166	14	NNC	ENSMUSG00000019518.12	novel	678	7	NA	NA	-95	-6	intron_retention	FALSE	canonical	1	6	junction_1	18.0767594100611	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTATGGTGGTGCATT	8562	False	NA	12	True	NA	NA	NA	138170748	138178685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170778_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.24	chr5	+	1492	12	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	204	1	intron_retention	FALSE	canonical	3	48	junction_4	10.4105794886383	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACCTTTCCTCCTTCCT	8861	False	NA	14	True	AAAAAG	-13	NA	138171047	138176944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.25	chr5	+	3663	10	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	213	-6	intron_retention	FALSE	canonical	3	48	junction_4	10.9792171795872	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTATGGTGGTGCATT	8870	False	NA	12	True	NA	NA	NA	138171056	138178685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.26	chr5	+	3623	8	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	-187	-1	intron_retention	FALSE	canonical	3	48	junction_2	12.3915705384008	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTGGTGCATTCCTAT	696	False	NA	17	True	NA	NA	NA	138172860	138178690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138173123_138173205_138173287_138174173_138174237_138174313_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.27	chr5	+	3317	6	NNC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	-516	-6	intron_retention	TRUE	non_canonical	0	0	junction_2	28.8027776438315	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTATGGTGGTGCATT	2150	False	NA	12	True	NA	NA	NA	138174314	138178685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138174381_138174471_138174645_138174694_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.28	chr5	+	2724	6	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	-374	-3	intron_retention	FALSE	canonical	3	55	junction_1	9.8508882848198	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGGTGGTGCATTCCT	2292	False	NA	15	True	NA	NA	NA	138174456	138178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.29	chr5	+	4958	3	NNC	ENSMUSG00000019518.12	novel	959	5	NA	NA	2	1245	intron_retention	FALSE	non_canonical	0	0	junction_2	41.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAACTGGAAAA	2668	False	NA	NA	False	NA	NA	NA	138174832	138179936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138176443_138176538_138178720_138178769
ES.27551.3	chr5	+	3476	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	3	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	9.89356624586021	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	8080	False	NA	18	True	NA	NA	NA	138170266	138178691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.30	chr5	+	3134	3	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	531	-5	intron_retention	FALSE	canonical	3	60	junction_1	11.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTATGGTGGTGCATTC	3197	False	NA	13	True	NA	NA	NA	138175361	138178686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138176236_138176330_138176443_138176538
ES.27551.4	chr5	+	3856	13	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	1	-3	intron_retention	FALSE	canonical	1	2	junction_1	19.8948625417608	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGGTGGTGCATTCCT	8081	False	NA	15	True	NA	NA	NA	138170267	138178688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170312_138170445_138170511_138170610_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.5	chr5	+	3554	14	NIC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	13	-4	intron_retention	FALSE	canonical	3	48	junction_6	10.1742219800537	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATGGTGGTGCATTCC	8093	False	NA	14	True	NA	NA	NA	138170279	138178687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176443_138176538
ES.27551.6	chr5	+	5212	8	NIC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	53	junction_2	9.5831484749991	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCCTCCTTCCTCCCTC	8113	False	NA	19	True	AAAAAG	-18	NA	138170299	138176949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138170511_138170610_138173123_138173205_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.7	chr5	+	1693	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	58	1728	-8	14	multi-exon	FALSE	canonical	3	48	junction_6	9.89356624586021	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACAGGTTGTTTGAG	8135	False	NA	33	True	AAAAAG	-32	NA	138170321	138176963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.8	chr5	+	6432	7	NNC	ENSMUSG00000019518.12	novel	1568	14	NA	NA	-8	-8	intron_retention	FALSE	canonical	0	0	junction_1	27.7528777286649	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGGTATGGTGGTGCA	8135	False	NA	10	True	NA	NA	NA	138170321	138178683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138174073_138174747_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27551.9	chr5	+	1958	15	NNC	ENSMUSG00000019518.12	novel	3479	15	NA	NA	13	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	19.3754525951087	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTTTCCTCCTTCCTC	8156	False	NA	15	True	AAAAAG	-14	NA	138170342	138176945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174638_138174681_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ES.27552.1	chr5	+	1638	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-57	274	-57	-274	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGAGTCCCATTTCAAA	5541	False	NA	17	True	ATTAAA	-17	NA	138185689	138191906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ES.27552.2	chr5	+	1119	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	-40	776	-40	545	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTCTCTACGTTTTA	5558	False	NA	NA	False	NA	NA	NA	138185706	138191404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ES.27552.3	chr5	+	4425	5	NIC	ENSMUSG00000036968.16	novel	1855	6	NA	NA	-28	-7	intron_retention	FALSE	canonical	3	120	junction_4	28.3581998723473	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGTTAAGTGTAATA	5570	False	NA	NA	False	AAAACA	-5	NA	138185718	138192173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ES.27552.4	chr5	+	1792	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	34	29	34	-29	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAACAAAACAAG	5632	False	NA	NA	False	NA	NA	NA	138185780	138192151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ES.27552.5	chr5	+	1470	6	NNC	ENSMUSG00000036968.16	novel	1855	6	NA	NA	34	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.8204046228857	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTGAGTCCCATTTCA	5632	False	NA	15	True	ATTAAA	-15	NA	138185780	138191904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190897_138190941_138191026
ES.27552.6	chr5	+	3881	5	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	247	276	247	-276	3prime_fragment	FALSE	canonical	3	120	junction_4	28.3581998723473	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTGAGTCCCATTTCA	5845	False	NA	15	True	ATTAAA	-15	NA	138185993	138191904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ES.27552.7	chr5	+	4079	1	NIC	ENSMUSG00000036968.16	novel	1855	6	NA	NA	-355	-278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGCTGAGTCCCATTT	279	False	NA	13	True	ATTAAA	-13	NA	138187823	138191902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138187800_138191900
ES.27553.1	chr5	-	2999	15	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	75	377	combination_of_known_junctions	FALSE	canonical	2	14	junction_14	569.176244179934	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTGTGGAGCTGTG	2972	False	NA	NA	False	ATTAAA	-16	NA	138169428	138162467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169071
ES.27553.11	chr5	-	2370	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-36	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	569.284732926202	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2284	False	NA	-14	True	AATAAA	-26	NA	138170116	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164314_138164935_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.12	chr5	-	2424	14	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	771.237405793232	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2881	False	NA	-14	True	AATAAA	-26	NA	138169519	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165701_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169071
ES.27553.13	chr5	-	2398	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-45	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	570.373208468609	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2275	False	NA	-14	True	AATAAA	-26	NA	138170125	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165697_138165806_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.14	chr5	-	4912	7	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-40	-6	intron_retention	FALSE	canonical	3	1644	junction_4	172.006459827014	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2280	False	NA	-14	True	AATAAA	-26	NA	138170120	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.18	chr5	-	2719	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-40	-6	intron_retention	FALSE	canonical	3	1644	junction_11	199.813966733497	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2280	False	NA	-14	True	AATAAA	-26	NA	138170120	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.19	chr5	-	2390	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-45	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	570.179746989974	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2275	False	NA	-14	True	AATAAA	-26	NA	138170125	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165019_138165304_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.2	chr5	-	6888	5	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	1644	junction_4	148.588357551997	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGAGTTTTTAGTAT	2276	False	NA	-9	True	AATAAA	-31	NA	138170124	138162845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821
ES.27553.20	chr5	-	2329	15	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	565.543210063546	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2881	False	NA	-14	True	AATAAA	-26	NA	138169519	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169449
ES.27553.21	chr5	-	2390	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	573.544991385033	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2276	False	NA	-14	True	AATAAA	-26	NA	138170124	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167204_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.22	chr5	-	3567	12	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-9	-6	intron_retention	FALSE	canonical	2	14	junction_11	627.438265377164	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	3112	False	NA	-14	True	AATAAA	-26	NA	138169288	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169071
ES.27553.23	chr5	-	2312	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-55	-6	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_8	550.770684531026	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2265	False	NA	-14	True	AATAAA	-26	NA	138170135	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166689_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.24	chr5	-	2593	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-40	-6	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	565.813271462649	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2280	False	NA	-14	True	AATAAA	-26	NA	138170120	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165106_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.25	chr5	-	3479	12	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-36	-6	intron_retention	FALSE	canonical	3	1644	junction_9	209.426923683743	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2284	False	NA	-14	True	AATAAA	-26	NA	138170116	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.27	chr5	-	4073	1	FSM	ENSMUSG00000065527.3	ENSMUST00000083593.3	88	1	-3051	-934	-3051	934	mono-exon	FALSE	NA	NA	NA	NA	NA	1281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	5477	False	NA	-14	True	AATAAA	-26	NA	138166923	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138162800_138166900
ES.27553.29	chr5	-	2957	12	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-33	-6	intron_retention	FALSE	canonical	3	1644	junction_9	207.195679459724	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2287	False	NA	-14	True	AATAAA	-26	NA	138170113	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.30	chr5	-	4402	9	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-56	-6	intron_retention	FALSE	canonical	3	1644	junction_6	175.734485446084	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2264	False	NA	-14	True	AATAAA	-26	NA	138170136	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138165029_138165307_138165702_138165812_138165897_138166102_138167210_138167359_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.31	chr5	-	3162	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-62	-6	intron_retention	FALSE	canonical	3	1644	junction_11	160.722223528965	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	2258	False	NA	-14	True	AATAAA	-26	NA	138170142	138162850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.32	chr5	-	4624	9	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	-7	intron_retention	FALSE	canonical	3	1644	junction_6	161.437875047958	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTCTGTAGAGTTTT	2276	False	NA	-15	True	AATAAA	-25	NA	138170124	138162851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.33	chr5	-	2686	15	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	2	14	junction_14	569.176244179934	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTCTGTAGAGTTTT	2901	False	NA	-15	True	AATAAA	-25	NA	138169499	138162851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169071
ES.27553.34	chr5	-	3328	10	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-56	-7	intron_retention	FALSE	canonical	3	1644	junction_7	219.35027515341	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTCTGTAGAGTTTT	2264	False	NA	-15	True	AATAAA	-25	NA	138170136	138162851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165702_138165812_138165897_138166102_138167210_138167359_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.37	chr5	-	2485	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-55	4	intron_retention	FALSE	canonical	3	1644	junction_11	193.793368881614	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTAATAACTCTGTAG	2265	False	NA	-21	True	AATAAA	-19	NA	138170135	138162857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.38	chr5	-	2617	14	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-42	2	intron_retention	FALSE	canonical	2	77	junction_8	570.672768129007	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGTTAATAACTCTGT	2278	False	NA	-23	True	AATAAA	-17	NA	138170122	138162859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166689_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.39	chr5	-	2250	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	589.976381033609	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2261	False	NA	-25	True	AATAAA	-15	NA	138170139	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.4	chr5	-	2934	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	27	1	27	-1	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGAGTTTTTAGTAT	1743	False	NA	-9	True	AATAAA	-31	NA	138170657	138162845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.42	chr5	-	2787	13	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	1644	junction_10	201.009310867819	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2286	False	NA	-25	True	AATAAA	-15	NA	138170114	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166435_138166594_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.43	chr5	-	2472	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-45	0	intron_retention	FALSE	canonical	3	1920	junction_7	152.553143325405	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2275	False	NA	-25	True	AATAAA	-15	NA	138170125	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167987_138168578_138168659_138169987
ES.27553.44	chr5	-	3082	11	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	1644	junction_8	217.501471259392	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2286	False	NA	-25	True	AATAAA	-15	NA	138170114	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.45	chr5	-	4783	8	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-33	0	intron_retention	FALSE	canonical	3	1644	junction_5	176.224231000838	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2287	False	NA	-25	True	AATAAA	-15	NA	138170113	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138165702_138165812_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.46	chr5	-	2973	12	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	1644	junction_9	211.246282181574	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2286	False	NA	-25	True	AATAAA	-15	NA	138170114	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.47	chr5	-	5388	6	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-32	0	intron_retention	FALSE	canonical	3	1644	junction_4	207.254047005119	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2288	False	NA	-25	True	AATAAA	-15	NA	138170112	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138165702_138165812_138165897_138166102_138167736_138167821_138168659_138169987
ES.27553.48	chr5	-	2569	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-68	0	intron_retention	FALSE	canonical	3	1644	junction_11	196.892155024163	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2252	False	NA	-25	True	AATAAA	-15	NA	138170148	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.5	chr5	-	4011	8	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	-2	intron_retention	FALSE	canonical	3	1946	junction_6	162.203324156279	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTAGAGTTTTTAGTA	2276	False	NA	-10	True	AATAAA	-30	NA	138170124	138162846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138165702_138165812_138165897_138166102_138167210_138167359_138167987_138168578_138168659_138169987
ES.27553.50	chr5	-	2848	12	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	0	intron_retention	FALSE	canonical	0	0	junction_3	627.676207520727	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2276	False	NA	-25	True	AATAAA	-15	NA	138170124	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138165247_138165702_138165812_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.51	chr5	-	4809	7	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	1644	junction_4	187.359206398357	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2331	False	NA	-25	True	AATAAA	-15	NA	138170069	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138165702_138165812_138167210_138167359_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.52	chr5	-	5765	4	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	1946	junction_3	95.7577963173524	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2901	False	NA	-25	True	AATAAA	-15	NA	138169499	138162861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138167210_138167359_138167987_138168578
ES.27553.54	chr5	-	2371	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	569.284732926202	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCTTGTTAATAACTC	2278	False	NA	-26	True	AATAAA	-14	NA	138170122	138162862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164330_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.55	chr5	-	2477	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-77	-1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	565.813271462649	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCTTGTTAATAACTC	2243	False	NA	-26	True	AATAAA	-14	NA	138170157	138162862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165247_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.56	chr5	-	2553	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	569.284732926202	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCTTGTTAATAACTC	2276	False	NA	-26	True	AATAAA	-14	NA	138170124	138162862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164510_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.57	chr5	-	3570	11	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	1644	junction_9	217.194590172039	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCTTGTTAATAACTC	2280	False	NA	-26	True	AATAAA	-14	NA	138170120	138162862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165897_138166102_138166235_138166319_138167210_138167359_138167541_138167610_138167736_138167821_138168659_138169987
ES.27553.6	chr5	-	3570	11	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-55	-4	intron_retention	FALSE	canonical	3	1644	junction_8	214.393656622578	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGTAGAGTTTTTAG	2265	False	NA	-12	True	AATAAA	-28	NA	138170135	138162848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138167210_138167359_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.60	chr5	-	1716	12	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	634.157604833842	1284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGCTTGTTAATAACT	2288	False	NA	-27	True	AATAAA	-13	NA	138170112	138162863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138166364_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.61	chr5	-	401	1	NIC	ENSMUSG00000029730.17	novel	829	6	NA	NA	4	-1202	mono-exon	FALSE	NA	NA	NA	NA	NA	1077	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAAGTTGATTGTTT	3125	False	NA	NA	False	AATAAA	-7	NA	138169275	138168874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138168900_138169300
ES.27553.7	chr5	-	3026	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-68	-4	intron_retention	FALSE	canonical	3	1644	junction_11	196.677220323257	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGTAGAGTTTTTAG	2252	False	NA	-12	True	AATAAA	-28	NA	138170148	138162848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27553.8	chr5	-	2703	12	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	4	-4	intron_retention	FALSE	canonical	3	1644	junction_9	205.609273997354	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGTAGAGTTTTTAG	2327	False	NA	-12	True	AATAAA	-28	NA	138170073	138162848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165897_138166102_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ES.27554.1	chr5	-	3350	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	7	-1053	2	1053	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTGGTTTTGAGATG	1959	False	NA	NA	False	TTTAAA	-16	NA	138185481	138175825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.10	chr5	-	2496	14	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	362	junction_13	102.999511689542	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1957	False	NA	-4	True	AATAAA	-18	NA	138185483	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.11	chr5	-	2479	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	11	junction_13	189.301894075553	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1953	False	NA	-4	True	AATAAA	-18	NA	138185487	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185452
ES.27554.12	chr5	-	4082	13	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	263.593897986193	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138179279_138179379_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185452
ES.27554.13	chr5	-	2771	14	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	170	junction_13	145.539396646858	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1977	False	NA	-4	True	AATAAA	-18	NA	138185463	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182810_138185345
ES.27554.14	chr5	-	4103	13	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	254.402390690199	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1963	False	NA	-4	True	AATAAA	-18	NA	138185477	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
ES.27554.15	chr5	-	2388	14	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	6	0	intron_retention	FALSE	canonical	3	362	junction_13	101.335227844846	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1979	False	NA	-4	True	AATAAA	-18	NA	138185461	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.16	chr5	-	2411	16	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	248.625608764128	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138179605_138179713_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.17	chr5	-	2385	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1957	False	NA	-4	True	AATAAA	-18	NA	138185483	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.18	chr5	-	2687	13	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	170	junction_12	155.06199477055	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1953	False	NA	-4	True	AATAAA	-18	NA	138185487	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.19	chr5	-	2300	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	7	1	7	-1	multi-exon	FALSE	canonical	3	12	junction_14	183.295568157341	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCCTCCCGCATCAC	9939	False	NA	-5	True	AATAAA	-17	NA	138185706	138176879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
ES.27554.2	chr5	-	3170	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	24	804	intron_retention	FALSE	canonical	3	77	junction_14	167.30713843536	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGATTCTCCTGCCTCA	1997	False	NA	NA	False	NA	NA	NA	138185443	138176074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
ES.27554.20	chr5	-	2431	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	183.295568157341	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCCTCCCGCATCAC	1963	False	NA	-5	True	AATAAA	-17	NA	138185477	138176879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185292
ES.27554.21	chr5	-	3318	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	7	1	intron_retention	FALSE	canonical	3	77	junction_13	173.060751381239	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	1980	False	NA	-6	True	AATAAA	-16	NA	138185460	138176880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
ES.27554.22	chr5	-	2298	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	198.425498793448	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	1950	False	NA	-6	True	AATAAA	-16	NA	138185490	138176880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181627_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.23	chr5	-	1305	6	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	354.752533465231	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	1950	False	NA	-6	True	AATAAA	-16	NA	138185490	138176880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177405_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
ES.27554.24	chr5	-	3285	14	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_3	206.565089244709	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGCCTCCCGCATCA	1957	False	NA	-6	True	AATAAA	-16	NA	138185483	138176880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.25	chr5	-	5632	11	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	202	0	intron_retention	FALSE	canonical	3	620	junction_6	51.1601407347556	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	2175	False	NA	-7	True	AATAAA	-15	NA	138185265	138176881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138180353_138180462_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593
ES.27554.26	chr5	-	4317	10	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	241.201160859561	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	1959	False	NA	-7	True	AATAAA	-15	NA	138185481	138176881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138180754_138180859_138181006_138181356_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.27	chr5	-	3187	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	199.063688403527	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	1953	False	NA	-7	True	AATAAA	-15	NA	138185487	138176881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.28	chr5	-	4062	12	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	362	junction_11	110.8431249429	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	1953	False	NA	-7	True	AATAAA	-15	NA	138185487	138176881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138179279_138179379_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.29	chr5	-	3294	13	NIC	ENSMUSG00000036980.14	novel	2619	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_12	154.792042395237	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	1957	False	NA	-7	True	AATAAA	-15	NA	138185483	138176881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.3	chr5	-	2504	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-10	83	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCTGCTCACATTGCT	1942	False	NA	79	True	AAGAAA	-18	NA	138185498	138176795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
ES.27554.30	chr5	-	3195	13	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	170	junction_12	155.501049478416	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	1958	False	NA	-9	True	AATAAA	-13	NA	138185482	138176883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.31	chr5	-	2270	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_14	183.542590842184	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	1960	False	NA	-9	True	AATAAA	-13	NA	138185480	138176883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185452
ES.27554.34	chr5	-	2287	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	200.074526930668	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	1957	False	NA	-9	True	AATAAA	-13	NA	138185483	138176883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181363_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.37	chr5	-	3412	11	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	362	junction_10	114.826129430544	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	1962	False	NA	-9	True	AATAAA	-13	NA	138185478	138176883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.38	chr5	-	2272	14	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	226.116218743146	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGAGCCTCCCGC	1962	False	NA	-10	True	AATAAA	-12	NA	138185478	138176884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.39	chr5	-	3260	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	221.750882933152	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGAGCCTCCCGC	1963	False	NA	-10	True	AATAAA	-12	NA	138185477	138176884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.4	chr5	-	2364	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	-3	-57	-3	57	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAAATGTCCTCTTC	1949	False	NA	53	True	NA	NA	NA	138185491	138176821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.40	chr5	-	4606	8	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	16	-3	intron_retention	FALSE	canonical	3	362	junction_7	131.510378266648	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGAGCCTCCCGC	1989	False	NA	-10	True	AATAAA	-12	NA	138185451	138176884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177873_138178041_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.41	chr5	-	867	1	FSM	ENSMUSG00000036980.14	ENSMUST00000200483.2	1139	1	-10	282	0	-282	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTATTCATATATTTAAC	1952	False	NA	NA	False	AAAAAG	-10	NA	138185488	138184621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138184600_138185500
ES.27554.5	chr5	-	2518	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	176.391146985028	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCCGCATCACATAAG	1950	False	NA	0	True	AATAAA	-22	NA	138185490	138176874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185223
ES.27554.6	chr5	-	3433	11	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	-5	1	intron_retention	FALSE	canonical	3	170	junction_10	166.998203583152	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCCCGCATCACAT	1947	False	NA	-3	True	AATAAA	-19	NA	138185493	138176877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27554.7	chr5	-	3230	14	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	1	1	intron_retention	FALSE	canonical	3	362	junction_13	103.611244277966	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCCCGCATCACAT	1964	False	NA	-3	True	AATAAA	-19	NA	138185476	138176877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177410_138177674_138177873_138178041_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.8	chr5	-	4167	12	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_3	222.412987907817	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1989	False	NA	-4	True	AATAAA	-18	NA	138185451	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138177410_138177674_138177873_138178041_138178722_138178771_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181984_138182100_138182188_138182593_138182810_138185431
ES.27554.9	chr5	-	2157	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	25	0	combination_of_known_junctions	TRUE	canonical	1	10	junction_1	220.720203341845	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1998	False	NA	-4	True	AATAAA	-18	NA	138185442	138176878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138177223_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
ES.27555.1	chr5	+	1323	1	FSM	ENSMUSG00000049285.5	ENSMUST00000057773.5	1308	1	-16	1	-16	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTCCTGATGTAAATG	5015	False	NA	NA	False	AATAAA	-16	NA	138192559	138193882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138192600_138193900
ES.27556.1	chr5	-	157	1	Intergenic	novelGene_22949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	1055	False	NA	NA	False	NA	NA	NA	138226344	138226187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138226200_138226300
ES.27557.1	chr5	+	138	1	Intergenic	novelGene_22950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	9487	False	NA	NA	False	NA	NA	NA	138229223	138229361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138229200_138229400
ES.27558.1	chr5	+	615	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	263	-1	-86	1	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCACAGAATGGTT	NA	False	NA	36	True	AATAAA	-28	NA	138254006	138257658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
ES.27558.2	chr5	+	985	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	-7	2	-7	1	multi-exon	FALSE	canonical	3	386	junction_1	14	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCACAGAATGGTT	NA	False	NA	36	True	AATAAA	-28	NA	138254085	138257658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138254596_138256916_138257035_138257301
ES.27558.3	chr5	+	659	4	NNC	ENSMUSG00000050552.9	novel	980	3	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.907972892153	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGCTCAGGATGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	138254089	138257646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138254205_138254514_138254596_138256916_138257035_138257301
ES.27558.4	chr5	+	955	4	NNC	ENSMUSG00000050552.9	novel	980	3	NA	NA	207	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	194.690067086696	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGGCTCAGGATGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	138254299	138257646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138254596_138255711_138255908_138256916_138257035_138257301
ES.27559.1	chr5	-	1945	13	NNC	ENSMUSG00000036948.18	novel	2490	11	NA	NA	19	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5127583634158	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGGTGCTGTCTTTCCT	9235	False	NA	NA	False	NA	NA	NA	138262276	138256755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138257047_138257742_138257816_138258540_138258657_138258775_138258970_138259096_138259252_138259814_138260001_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138262011
ES.27559.10	chr5	-	2940	8	NNC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	24	-11	intron_retention	FALSE	canonical	0	0	junction_2	14.3270829592925	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAGGGAGTATGAGT	9283	False	NA	-15	True	ATTAAA	-5	NA	138262228	138257932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138258970_138259096_138259244_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138261007_138261108_138261239_138261328
ES.27559.2	chr5	-	3949	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	-695	-1161	-2	1159	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGATGGTGCTGTCTTT	9214	False	NA	NA	False	NA	NA	NA	138262297	138256758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
ES.27559.3	chr5	-	2809	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	-716	0	-23	0	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9193	False	NA	-2	True	ATTAAA	-18	NA	138262318	138257919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
ES.27559.4	chr5	-	3105	7	NIC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	31	junction_5	5.34633831078181	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9224	False	NA	-2	True	ATTAAA	-18	NA	138262287	138257919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138258970_138259096_138259252_138259814_138260147_138260431_138260580_138260675_138261007_138261108_138261239_138261328
ES.27559.5	chr5	-	2550	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	-62	2	-23	0	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9193	False	NA	-2	True	ATTAAA	-18	NA	138262318	138257919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
ES.27559.6	chr5	-	2571	12	NNC	ENSMUSG00000036948.18	novel	2490	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.1423002281142	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9244	False	NA	-2	True	ATTAAA	-18	NA	138262267	138257919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138258657_138258775_138258970_138259096_138259252_138259636_138259709_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
ES.27559.7	chr5	-	2841	11	NNC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_3	15.7445228571716	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9233	False	NA	-2	True	ATTAAA	-18	NA	138262278	138257919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138258657_138258775_138258970_138259096_138259252_138259636_138259709_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
ES.27559.8	chr5	-	3026	8	NIC	ENSMUSG00000036948.18	novel	2093	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	30	junction_4	4.59369576880387	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGAGTTTGTCTGTGTG	9193	False	NA	-4	True	ATTAAA	-16	NA	138262318	138257921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138261007_138261108_138261239_138261328
ES.27559.9	chr5	-	2005	12	NNC	ENSMUSG00000036948.18	novel	2490	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.2723905677718	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGAGTTTGTCTGTGTG	9202	False	NA	-4	True	ATTAAA	-16	NA	138262309	138257921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683_138261714_138262247
ES.2756.1	chr10	-	208	1	Intergenic	novelGene_2099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTGAGATTCCACCTC	NA	False	NA	NA	False	NA	NA	NA	49085067	49084859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_49084900_49085100
ES.27560.1	chr5	+	929	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	17	-322	2	-7	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCATGAGGACACAAGT	6203	False	NA	NA	False	NA	NA	NA	138262332	138264916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138262364_138264018
ES.27560.2	chr5	+	4953	2	NNC	ENSMUSG00000085227.2	novel	1267	2	NA	NA	2	2410	intron_retention	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGCAATTCTCTCC	6203	False	NA	NA	False	NA	NA	NA	138262332	138267333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138266827_138266874
ES.27560.3	chr5	+	1259	2	FSM	ENSMUSG00000085227.2	ENSMUST00000125662.2	1267	2	3	5	3	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATGAGGACACAAGTTT	6204	False	NA	NA	False	NA	NA	NA	138262333	138264918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138262364_138263689
ES.27560.4	chr5	+	701	3	FSM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	29	13	3	-13	multi-exon	FALSE	canonical	1	2	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCACACAAGCATGAGGAC	6204	False	NA	NA	False	NA	NA	NA	138262333	138264910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138262364_138264018_138264268_138264488
ES.27560.5	chr5	+	810	2	FSM	ENSMUSG00000085227.2	ENSMUST00000141454.2	624	2	19	-205	4	-124	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACACAAAGCTCTTACT	6205	False	NA	NA	False	NA	NA	NA	138262334	138264799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138262364_138264018
ES.27560.6	chr5	+	1076	2	NNC	ENSMUSG00000085227.2	novel	624	2	NA	NA	-14	-123	intron_retention	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACAAAGCTCTTACTG	-3	True	NA	NA	False	NA	NA	NA	138262355	138264800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138262650_138264018
ES.27561.2	chr5	-	2601	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161827.8	2586	10	-17	2	-17	0	multi-exon	FALSE	canonical	3	16	junction_6	3.67507453523138	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1704	False	NA	-2	True	AATAAA	-18	NA	138278284	138271918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
ES.27561.3	chr5	-	3772	8	NNC	ENSMUSG00000029510.16	novel	2583	10	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_4	11.0767268428458	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1717	False	NA	-2	True	AATAAA	-18	NA	138278271	138271918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274513_138274601_138274845_138275750_138276476_138276717_138277100
ES.27561.4	chr5	-	3813	8	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	2	junction_7	8.24126005820341	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1720	False	NA	-2	True	AATAAA	-18	NA	138278268	138271918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275750_138276476_138276717_138277100
ES.27561.5	chr5	-	4266	6	FSM	ENSMUSG00000029510.16	ENSMUST00000162909.8	4252	6	-14	0	6	0	multi-exon	FALSE	canonical	3	20	junction_5	3.26190128606002	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1727	False	NA	-2	True	AATAAA	-18	NA	138278261	138271918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138275750_138276476_138276800_138277100
ES.27561.6	chr5	-	2443	10	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	7.64166616179973	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1779	False	NA	-2	True	AATAAA	-18	NA	138278209	138271918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276717_138277100_138277260_138277910
ES.27561.7	chr5	-	3485	9	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	16	junction_5	3.63145976158349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGGCTCTCTGTGTGT	1704	False	NA	-3	True	AATAAA	-17	NA	138278284	138271919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
ES.27561.8	chr5	-	3933	7	NIC	ENSMUSG00000029510.16	novel	3281	8	NA	NA	5	-3	intron_retention	FALSE	canonical	2	2	junction_6	8.89600409672168	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACGTGTATGGCTCTCTG	1726	False	NA	-8	True	AATAAA	-12	NA	138278262	138271924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274601_138274845_138275750_138276476_138276717_138277100
ES.27561.9	chr5	-	5260	3	NIC	ENSMUSG00000029510.16	novel	1574	5	NA	NA	229	-5	intron_retention	FALSE	canonical	3	21	junction_1	3.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCACGTGTATGGCTCTC	1993	False	NA	-10	True	AATAAA	-10	NA	138277995	138271926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138274109_138274190_138275750_138276476
ES.27562.1	chr5	+	4610	31	NIC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	-15	-1	intron_retention	TRUE	canonical	1	2	junction_1	33.3566585057117	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278486	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.10	chr5	+	5768	29	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-11	-36	intron_retention	FALSE	canonical	0	0	junction_18	34.0200083684257	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGCCAAACTTTCAA	NA	False	NA	-23	True	AGTAAA	-25	NA	138278759	138310612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298478_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138307534_138309995_138310068_138310297
ES.27562.11	chr5	+	5320	29	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	26	junction_15	27.7649343891293	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278763	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.12	chr5	+	4187	34	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	31.9510645114678	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278763	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302858_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.13	chr5	+	4053	32	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	36.1218310795716	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278764	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298111_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307460_138307534_138309995_138310068_138310297
ES.27562.15	chr5	+	4328	34	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.964655363191	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278765	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278918_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
ES.27562.16	chr5	+	4021	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-22	212	-5	-205	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTATTTCTTTCTGAAGT	NA	False	NA	NA	False	TTTAAA	-30	NA	138278765	138310443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.17	chr5	+	6529	28	NIC	ENSMUSG00000036928.15	novel	4669	33	NA	NA	-5	1	intron_retention	FALSE	canonical	2	2	junction_7	31.5917024754116	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278765	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289744_138294095_138294170_138294963_138295688_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.18	chr5	+	6482	25	NIC	ENSMUSG00000036928.15	novel	4669	33	NA	NA	-5	1	intron_retention	FALSE	canonical	2	2	junction_8	31.6688321627994	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278765	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.19	chr5	+	4216	34	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	32.1813331014061	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278772	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297366_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.2	chr5	+	4435	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	-218	-6	68	6	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGATTGTCATGTGGA	NA	False	NA	26	True	AATAAA	-26	NA	138278569	138310661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.21	chr5	+	3892	35	NNC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.293978912039	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCTCATAGGTATGACT	NA	False	NA	9	True	AATAAA	-9	NA	138278776	138310644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278847_138280276_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289035_138289133_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.22	chr5	+	4080	35	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.7185394358668	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278784	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289035_138289133_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.24	chr5	+	7122	23	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_16	33.025785067714	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278784	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138299833_138300785_138300888_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.25	chr5	+	4109	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_30	29.5591964327517	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278785	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307460_138307534_138309995_138310068_138310297
ES.27562.26	chr5	+	6725	25	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-1	0	intron_retention	FALSE	canonical	3	29	junction_1	25.9597712282335	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278786	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138297691_138297914_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.27	chr5	+	4355	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	9	intron_retention	FALSE	canonical	2	26	junction_17	30.5115825002026	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTCATGTGGATGG	NA	False	NA	29	True	AATAAA	-29	NA	138278787	138310664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.28	chr5	+	5379	29	NNC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_26	35.3102864124693	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278787	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307375_138307534_138309995_138310068_138310297
ES.27562.29	chr5	+	4135	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.2979360803849	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278787	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280166_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.3	chr5	+	4265	35	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	85	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7185394358668	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTGAGATTGTCATG	NA	False	NA	22	True	AATAAA	-22	NA	138278586	138310657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278673_138278787_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.30	chr5	+	3937	32	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	2	26	junction_18	26.9092976825667	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278787	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.31	chr5	+	4107	33	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	29.8097483006818	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278787	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299348_138299680_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.32	chr5	+	3902	32	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_18	30.1466067414376	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278787	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.33	chr5	+	4006	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	32.6039054169512	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278787	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.34	chr5	+	3985	33	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.8551229777559	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278789	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307102_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.35	chr5	+	6254	26	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	intron_retention	FALSE	canonical	3	72	junction_1	19.7332612611296	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCATAGGTATGACTTG	NA	False	NA	11	True	AATAAA	-11	NA	138278789	138310646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.36	chr5	+	5228	32	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	9	-1	intron_retention	FALSE	canonical	1	1	junction_29	30.0795684318234	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278796	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307375_138307534_138309995_138310068_138310297
ES.27562.37	chr5	+	3695	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	9	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.8844441766746	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGAGATTGTCATGTG	NA	False	NA	24	True	AATAAA	-24	NA	138278796	138310659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.38	chr5	+	4232	34	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_26	28.2288951858903	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278796	138310655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300918_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.39	chr5	+	3969	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	32.395444799385	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTGAGATTGTCATG	NA	False	NA	22	True	AATAAA	-22	NA	138278796	138310657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.4	chr5	+	6244	31	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	86	0	intron_retention	FALSE	canonical	0	0	junction_27	30.6807214169854	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278587	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307092_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.40	chr5	+	5561	28	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	7	junction_26	36.7738426151779	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278800	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
ES.27562.41	chr5	+	6398	27	NNC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_14	36.1109606531028	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278804	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138297691_138298385_138298478_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.42	chr5	+	3987	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	29.5546203822262	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278805	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.43	chr5	+	6774	25	NIC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_1	30.5071712880759	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278805	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.44	chr5	+	3986	34	NIC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	0	-166	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTTGTCATCCTTA	NA	False	NA	NA	False	NA	NA	NA	138278805	138310482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.45	chr5	+	4861	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	1	intron_retention	FALSE	canonical	2	26	junction_16	27.632289096516	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278805	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.47	chr5	+	4397	33	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_16	36.4286545867398	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278807	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297366_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
ES.27562.49	chr5	+	4685	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	intron_retention	FALSE	canonical	2	72	junction_1	21.5090596827825	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATAGGTATGACTTGAG	NA	False	NA	13	True	AATAAA	-13	NA	138278807	138310648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.5	chr5	+	4377	34	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278587	138310655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.50	chr5	+	5702	27	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	1	intron_retention	FALSE	canonical	2	72	junction_1	21.6747064434166	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACTTGAGATTGTCAT	NA	False	NA	21	True	AATAAA	-21	NA	138278807	138310656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138298474_138299043_138299122_138299203_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.51	chr5	+	5469	29	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	1	intron_retention	FALSE	canonical	2	72	junction_1	21.220748173927	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278807	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.52	chr5	+	5875	29	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_3	31.0257463854701	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278807	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138281087_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298287_138298385_138298474_138299043_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.53	chr5	+	5047	32	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-1	intron_retention	FALSE	canonical	2	72	junction_1	21.1156076534985	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278807	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.54	chr5	+	3711	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	34.309457717791	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278807	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.55	chr5	+	4582	29	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_2	34.8444063381947	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278807	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280298_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.57	chr5	+	3845	32	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	33.032604584876	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278807	138310655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280166_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.58	chr5	+	5347	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	intron_retention	FALSE	canonical	3	29	junction_1	24.8504205339354	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278807	138310655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.59	chr5	+	4718	33	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_6	42.5391249138661	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278807	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289583_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296465_138296656_138296778_138296885_138297069_138297174_138297353_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.6	chr5	+	4328	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	-207	2	97	1	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278598	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.60	chr5	+	3565	28	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	31.1298003829014	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278807	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.61	chr5	+	4313	30	NIC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	4	0	intron_retention	FALSE	canonical	1	2	junction_27	34.8111945038145	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278809	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307460_138307534_138309995_138310068_138310297
ES.27562.62	chr5	+	5285	29	NNC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	4	0	intron_retention	FALSE	canonical	1	3	junction_18	35.0687917251397	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278809	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299348_138299456_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.63	chr5	+	7196	23	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_20	33.2039776567719	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278809	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138299122_138299203_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306740_138307534_138309995_138310068_138310297
ES.27562.64	chr5	+	4620	33	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_32	28.4865476749553	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278809	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310304
ES.27562.65	chr5	+	5240	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	5	1	intron_retention	FALSE	canonical	2	7	junction_29	27.9353221249053	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138278810	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
ES.27562.67	chr5	+	5626	31	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_28	30.3312087168023	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGACTTGAGATTGTCAT	NA	False	NA	21	True	AATAAA	-21	NA	138278816	138310656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307375_138307534_138309995_138310068_138310297
ES.27562.68	chr5	+	4796	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-1	29	intron_retention	FALSE	canonical	2	26	junction_16	27.2873902138863	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGGTTCTTTGGCTTC	NA	False	NA	49	True	NA	NA	NA	138278816	138310684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.69	chr5	+	3932	29	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_6	35.4151040071427	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278818	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.7	chr5	+	4315	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	103	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	29.0836616504869	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278604	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.71	chr5	+	5659	29	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	0	intron_retention	FALSE	canonical	2	26	junction_15	27.7452882559934	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278819	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.72	chr5	+	5632	30	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	2	-2	intron_retention	FALSE	canonical	2	72	junction_1	21.0461810319245	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278819	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.73	chr5	+	4167	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	4	-172	intron_retention	FALSE	canonical	2	26	junction_17	27.1763786321054	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTATGAGCCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	138278821	138310476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.74	chr5	+	7521	26	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	4	-2	intron_retention	FALSE	canonical	3	72	junction_1	21.1986414659053	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGTATGACTTGAGAT	NA	False	NA	15	True	AATAAA	-15	NA	138278821	138310650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138307534_138309995_138310068_138310297
ES.27562.75	chr5	+	4620	25	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-8436	1	intron_retention	FALSE	canonical	2	79	junction_12	20.4937321041229	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	8451	False	NA	18	True	AATAAA	-18	NA	138289001	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.76	chr5	+	5066	20	NIC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	-7768	0	intron_retention	FALSE	canonical	3	101	junction_3	17.4849361362789	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	9119	False	NA	17	True	AATAAA	-17	NA	138289669	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297486_138297600_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.77	chr5	+	2866	23	NNC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-2476	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	37.6420724699732	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTCATGTGGATGGAG	NA	False	NA	31	True	AATAAA	-31	NA	138294961	138310666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297353_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.78	chr5	+	2818	23	NNC	ENSMUSG00000036928.15	novel	4456	31	NA	NA	-2436	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.8072086880362	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138295001	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297366_138297486_138297581_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.79	chr5	+	4555	14	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-1501	1	intron_retention	FALSE	canonical	3	118	junction_2	15.3179324079472	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGACTTGAGATTGT	NA	False	NA	18	True	AATAAA	-18	NA	138295936	138310653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138307534_138309995_138310068_138310297
ES.27562.8	chr5	+	5103	31	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	-123	-1	intron_retention	FALSE	canonical	1	1	junction_16	30.4581497942486	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138278647	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297581_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.80	chr5	+	3374	18	NNC	ENSMUSG00000036928.15	novel	4669	33	NA	NA	-646	-1	intron_retention	FALSE	canonical	2	3	junction_2	42.7580300639318	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138296791	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138296885_138297069_138297174_138297353_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138299122_138299203_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307631_138309995_138310068_138310297
ES.27562.81	chr5	+	1245	9	NNC	ENSMUSG00000036928.15	novel	458	4	NA	NA	-763	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	47.8167073312247	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138301936	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138301955_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.82	chr5	+	797	5	ISM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	27919	1	-738	-1	3prime_fragment	FALSE	canonical	3	105	junction_1	25.6027342289842	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGACTTGAGATTGTC	NA	False	NA	19	True	AATAAA	-19	NA	138306724	138310654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27562.9	chr5	+	5283	29	NNC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_13	40.5098092177332	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278754	138310652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138289744_138294095_138294170_138294963_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297366_138297486_138297600_138297691_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ES.27563.1	chr5	-	822	1	Intergenic	novelGene_22951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138306246	138305424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_138305400_138306200
ES.27564.1	chr5	+	2446	1	Intergenic	novelGene_22952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	138321000	138323446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138321000_138323400
ES.27565.1	chr5	-	2356	1	FSM	ENSMUSG00000080935.4	ENSMUST00000121655.2	1293	1	-56	-1007	-56	1007	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTGAACATGACTAGAA	1739	False	NA	NA	False	AATAAA	-31	NA	138363870	138361514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138361500_138363900
ES.27566.2	chr5	+	3284	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	0	2028	0	-2028	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATGACGGCTCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	138439729	138456928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
ES.27566.4	chr5	+	5365	2	NNC	ENSMUSG00000036898.17	novel	2841	2	NA	NA	9	-234	intron_retention	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATTCAACCCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	138439749	138445260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138444073_138444218
ES.27566.5	chr5	+	6967	5	NNC	ENSMUSG00000036898.17	novel	5312	5	NA	NA	12	-2032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7584937447825	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGAATGACGGCTCTG	NA	False	NA	NA	False	NA	NA	NA	138439752	138456924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138439892_138443013_138443141_138445776_138449580_138453241_138453352_138454136
ES.27566.6	chr5	+	2264	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	23	3025	12	1342	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTATGTTCCGTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	138439752	138455931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
ES.27566.7	chr5	+	7621	2	ISM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	8798	2023	8726	-2023	3prime_fragment	FALSE	canonical	3	42	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGGCTCTGTTTGTTATT	7027	False	NA	NA	False	NA	NA	NA	138448527	138456933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138453352_138454136
ES.27566.8	chr5	+	3862	1	NIC	ENSMUSG00000036898.17	novel	5312	5	NA	NA	13262	-2031	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138453063	138456925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138453100_138456900
ES.27567.1	chr5	-	4740	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	11	-2	8	2	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATTTTAATTTCTTTT	1742	False	NA	NA	False	ATTAAA	-18	NA	138618012	138601911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ES.27567.10	chr5	-	2157	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	33	1128	13	4	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTTGTTTATCAA	1767	False	NA	-1	True	AATAAA	-18	NA	138617987	138604373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ES.27567.11	chr5	-	2263	6	NNC	ENSMUSG00000058291.15	novel	2254	6	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_2	34.7021613159757	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGTTTGTTTATCAA	1755	False	NA	-1	True	AATAAA	-18	NA	138617999	138604373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138606084_138610085_138610176_138610296_138610428_138614731_138614822_138615316_138615430_138617870
ES.27567.12	chr5	-	6214	4	NIC	ENSMUSG00000058291.15	novel	3318	5	NA	NA	-21	2	intron_retention	FALSE	canonical	3	23	junction_2	31.5629881700422	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCTTTGTTTGTTTATC	1710	False	NA	-3	True	AATAAA	-16	NA	138618044	138604375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138610176_138610300_138610428_138615316_138615430_138617870
ES.27567.2	chr5	-	4596	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	50	-1328	30	-4	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTCTCATTTTAATT	1784	False	NA	NA	False	ATTAAA	-12	NA	138617970	138601917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ES.27567.3	chr5	-	3778	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	7	964	4	368	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTGTATTCAGCAG	1738	False	NA	NA	False	AATAAA	-17	NA	138618016	138602877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ES.27567.4	chr5	-	2328	7	NNC	ENSMUSG00000058291.15	novel	4749	6	NA	NA	1	358	intron_retention	FALSE	canonical	0	0	junction_1	30.362623221469	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTATTTTAAGTTG	1755	False	NA	NA	False	AATAAA	-7	NA	138617999	138602887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138603025_138604447_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ES.27567.5	chr5	-	3740	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	8	-1494	6	358	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTATTTTAAGTTG	1760	False	NA	NA	False	AATAAA	-7	NA	138617994	138602887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
ES.27567.7	chr5	-	8537	4	NIC	ENSMUSG00000058291.15	novel	3318	5	NA	NA	8	358	intron_retention	FALSE	canonical	3	65	junction_1	12.1197726417986	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTATTTTAAGTTG	1762	False	NA	NA	False	AATAAA	-7	NA	138617992	138602887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138606084_138610085_138610176_138610300_138615430_138617870
ES.27567.8	chr5	-	2953	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	43	1753	20	-421	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTTTATCTGTGCATG	1774	False	NA	NA	False	TATAAA	-29	NA	138617980	138603666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ES.27567.9	chr5	-	2262	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	28	2459	5	5	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGTTTGTTTATCAAA	1759	False	NA	0	True	AATAAA	-19	NA	138617995	138604372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ES.27568.1	chr5	+	3007	5	NNC	ENSMUSG00000056014.16	novel	3038	4	NA	NA	-13	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	11.7686022959398	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTATTGGACACTCTC	1794	False	NA	46	True	AATAAA	-13	NA	138621107	138647095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375_138646894_138646969
ES.27568.2	chr5	+	2200	4	NNC	ENSMUSG00000056014.16	novel	3038	4	NA	NA	1	-790	intron_retention	FALSE	non_canonical	0	0	junction_3	13.589211407093	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAAAGCTTTGCACAG	1808	False	NA	NA	False	AATGAA	-15	NA	138621121	138646308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138621251_138634425_138634553_138637756_138637792_138644399
ES.27568.4	chr5	+	3353	5	NNC	ENSMUSG00000056014.16	novel	3038	4	NA	NA	2	377	intron_retention	FALSE	non_canonical	0	0	junction_4	11.7686022959398	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAGTTTGTTTATCTT	1826	False	NA	NA	False	AGTAAA	-20	NA	138621139	138647475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375_138646892_138646969
ES.27568.6	chr5	+	2820	3	NNC	ENSMUSG00000056014.16	novel	3038	4	NA	NA	16600	81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATAGTGGGATTTATAG	NA	False	NA	NA	False	NA	NA	NA	138637755	138647179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_138637850_138644375_138646892_138646969
ES.27569.1	chr5	+	3573	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	4	5	4	-5	multi-exon	TRUE	canonical	2	6	junction_4	3.46410161513775	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGAGGTGGGGACTCAC	NA	False	NA	12	True	AATAAA	-25	NA	138740272	138795827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ES.27569.2	chr5	+	4909	9	NIC	ENSMUSG00000025854.16	novel	3582	10	NA	NA	61	525	intron_retention	FALSE	canonical	2	6	junction_4	3.29535658161602	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	138740329	138796357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138793116_138793228_138793311_138793790_138793851_138794862
ES.27569.3	chr5	+	2995	3	ISM	ENSMUSG00000025854.16	ENSMUST00000160645.8	2395	11	-46	49853	-46	679	5prime_fragment	FALSE	canonical	0	0	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGGTGACATGCTTAGA	NA	False	NA	NA	False	AATAAA	-21	NA	138740791	138745283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_138741981_138742456_138742535_138743555
ES.27569.4	chr5	+	3069	11	FSM	ENSMUSG00000025854.16	ENSMUST00000160645.8	2395	11	6	-680	2	-16	multi-exon	FALSE	canonical	0	0	junction_2	5.47813836992094	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCATGGCTCTCTGAGG	NA	False	NA	1	True	AATAAA	-14	NA	138740843	138795816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138741981_138742456_138742535_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ES.27569.5	chr5	+	4203	1	Intergenic	novelGene_22953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGCTTCACCAAACATT	NA	False	NA	NA	False	NA	NA	NA	138747598	138751801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138747600_138751800
ES.2757.1	chr10	-	158	1	Intergenic	novelGene_2100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	49310206	49310048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_49310000_49310200
ES.27570.1	chr5	+	170	1	Intergenic	novelGene_22954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	138892311	138892481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_138892300_138892500
ES.27571.1	chr5	+	2841	1	FSM	ENSMUSG00000075585.4	ENSMUST00000187923.2	5522	1	2684	-3	2684	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCACCTCTCTCATCTTT	6499	False	NA	NA	False	AATAAA	-20	NA	138983494	138986335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_138983500_138986300
ES.27572.1	chr5	-	3158	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-1082	-16	-32	16	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTCTGTTTGTCTGGTT	NA	False	NA	-3	True	NA	NA	NA	138981874	138961752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ES.27572.10	chr5	-	4619	5	NIC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	368	-8	intron_retention	FALSE	canonical	3	325	junction_4	47.7722461268046	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGCACACTGGATGCA	NA	False	NA	-27	True	ACTAAA	-24	NA	138981388	138961776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964900_138965028_138971944_138974209_138979042_138979140_138980463
ES.27572.11	chr5	-	5868	4	ISM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	2342	8	1586	-8	3prime_fragment	FALSE	canonical	3	360	junction_3	32.6190128606002	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGCACACTGGATGCA	NA	False	NA	-27	True	ACTAAA	-24	NA	138978450	138961776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103
ES.27572.13	chr5	-	2634	9	NIC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-271	-26	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	178.650321858092	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAACAAAACT	9707	False	NA	-45	True	ACTAAA	-6	NA	138983396	138961794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964376_138964446_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981953_138982152_138982864
ES.27572.14	chr5	-	2167	7	NNC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-31	-26	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	146.173127945369	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAACAAAACT	NA	False	NA	-45	True	ACTAAA	-6	NA	138981873	138961794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980541_138981488
ES.27572.17	chr5	-	2062	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	3	-74	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	194.692167279529	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCTGCTATATATATTA	NA	False	NA	-93	True	NA	NA	NA	138980705	138961842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979046_138979140_138980296
ES.27572.18	chr5	-	2489	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-595	166	369	-166	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGAATTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	138981387	138961934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ES.27572.19	chr5	-	1908	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-61	-560	-61	134	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGATGCGCCTCTGCC	NA	False	NA	-7	True	AATAAA	-24	NA	138981903	138962136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
ES.27572.20	chr5	-	2745	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-1053	368	-3	134	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGATGCGCCTCTGCC	NA	False	NA	-7	True	AATAAA	-24	NA	138981845	138962136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ES.27572.21	chr5	-	1771	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	4	134	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	157.310393807911	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGATGCGCCTCTGCC	NA	False	NA	-7	True	AATAAA	-24	NA	138980704	138962136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980296
ES.27572.22	chr5	-	1873	6	NIC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-251	132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	160.041994488947	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGATGCGCCTCTG	9727	False	NA	-9	True	AATAAA	-22	NA	138983376	138962138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138982864
ES.27572.24	chr5	-	1916	7	NNC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	367	127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	146.173127945369	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTATTTCTGATGCGC	NA	False	NA	-14	True	AATAAA	-17	NA	138981389	138962143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138980959
ES.27572.25	chr5	-	1884	7	NIC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-69	127	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	185.652378265283	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTATTTCTGATGCGC	9909	False	NA	-14	True	AATAAA	-17	NA	138983194	138962143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981953_138982152_138982864
ES.27572.26	chr5	-	2333	7	FSM	ENSMUSG00000025856.16	ENSMUST00000046901.14	1543	7	-663	-127	385	127	multi-exon	FALSE	canonical	3	9	junction_2	166.22140522675	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTATTTCTGATGCGC	NA	False	NA	-14	True	AATAAA	-17	NA	138981371	138962143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964376_138964446_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ES.27572.27	chr5	-	1418	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	163	127	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	158.090606931595	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTATTTCTGATGCGC	NA	False	NA	-14	True	AATAAA	-17	NA	138979873	138962143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138979811
ES.27572.3	chr5	-	2759	8	FSM	ENSMUSG00000025856.16	ENSMUST00000110896.2	1363	8	-432	-964	-432	7	multi-exon	FALSE	canonical	1	3	junction_7	172.66459169294	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATCCCGTGGTTCTGTT	9546	False	NA	-12	True	ACTAAA	-39	NA	138983557	138961761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981953_138982152_138982864
ES.27572.31	chr5	-	1539	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	554	126	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	158.480787479114	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTATTTCTGATGCG	NA	False	NA	-15	True	AATAAA	-16	NA	138979482	138962144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138979298
ES.27572.32	chr5	-	1723	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-18	122	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTATCCATTATTTCTGA	NA	False	NA	-19	True	AATAAA	-12	NA	138981860	138962148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
ES.27572.34	chr5	-	1302	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-52	37	-52	-8	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAGAAAAAAAAAAC	NA	False	NA	NA	False	AAAACA	-6	NA	138981894	138962733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
ES.27572.4	chr5	-	2240	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	-19	-934	-19	6	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATCCCGTGGTTCTGT	NA	False	NA	-13	True	ACTAAA	-38	NA	138981861	138961762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
ES.27572.5	chr5	-	1525	2	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	39	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATCCCGTGGTTCTGT	NA	False	NA	-13	True	ACTAAA	-38	NA	138980753	138961762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962994_138980459
ES.27572.6	chr5	-	2001	6	NNC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	466	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	195.438379035439	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGCATCCCGTGGTT	NA	False	NA	-17	True	ACTAAA	-34	NA	138979570	138961766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979046_138979140_138979298
ES.27572.7	chr5	-	2125	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	-38	2	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATGCATCCCGTGGTT	NA	False	NA	-17	True	ACTAAA	-34	NA	138981880	138961766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
ES.27572.8	chr5	-	1917	6	NNC	ENSMUSG00000025856.16	novel	1363	8	NA	NA	-303	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	195.938357653625	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTGGATGCATCCCGT	NA	False	NA	-21	True	ACTAAA	-30	NA	138982145	138961770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979046_138979140_138981953
ES.27572.9	chr5	-	9400	4	NIC	ENSMUSG00000025856.16	novel	2060	6	NA	NA	368	-8	intron_retention	FALSE	canonical	3	325	junction_3	41.8754767800386	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGCACACTGGATGCA	NA	False	NA	-27	True	ACTAAA	-24	NA	138981388	138961776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_138965028_138971944_138972133_138974103_138979140_138980463
ES.27573.1	chr5	-	2564	11	FSM	ENSMUSG00000025855.14	ENSMUST00000026973.14	2637	11	71	2	71	0	multi-exon	FALSE	canonical	1	2	junction_7	3.06757233003559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGGAGCCTCTGTCTA	NA	False	NA	-4	True	ATTAAA	-24	NA	139115443	139003062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139004587_139005810_139005893_139022788_139022911_139028189_139028251_139036412_139036572_139048308_139048356_139049010_139049073_139092375_139092468_139094238_139094410_139113341_139113541_139115398
ES.27574.1	chr5	+	3634	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	-135	-49	-135	49	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTGTCTCCATATGTC	NA	False	NA	60	True	NA	NA	NA	139135842	139172314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.10	chr5	+	5205	8	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	7	12757	1	-4250	5prime_fragment	FALSE	canonical	3	278	junction_3	16.9428812334206	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAATTTAGGGGG	NA	False	NA	NA	False	NA	NA	NA	139135984	139159508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928
ES.27574.11	chr5	+	3416	13	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.0748748712752	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGGCCATCTGTG	NA	False	NA	7	True	ATTAAA	-15	NA	139135985	139172261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139200_139147445_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.14	chr5	+	3086	11	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	94.3600021195422	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135989	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139171264
ES.27574.15	chr5	+	7840	7	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	10	-4254	intron_retention	FALSE	canonical	3	278	junction_3	16.5495887830752	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAATTTAG	NA	False	NA	NA	False	NA	NA	NA	139135993	139159504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139151959_139155928
ES.27574.16	chr5	+	6385	12	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	10	-3	intron_retention	FALSE	canonical	3	278	junction_3	25.0790485801585	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135993	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139170475_139171264
ES.27574.17	chr5	+	3132	12	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.8177811406186	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGGCCATCTGT	NA	False	NA	6	True	ATTAAA	-14	NA	139135993	139172260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147641_139151850_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.18	chr5	+	3359	13	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	88.6246767742108	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGGCCATCTGT	NA	False	NA	6	True	ATTAAA	-14	NA	139135993	139172260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156079_139159931_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.19	chr5	+	3608	5	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	12	-19283	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	131.785811072361	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGTAGAAGAGTTATT	NA	False	NA	NA	False	NA	NA	NA	139135995	139144475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139141891
ES.27574.2	chr5	+	4825	6	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	-59	-4250	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	120.687033272013	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAATTTAGGGGG	NA	False	NA	NA	False	NA	NA	NA	139135918	139159508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139151814_139151959_139155928
ES.27574.21	chr5	+	6074	12	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	15	-3	intron_retention	FALSE	canonical	3	278	junction_3	23.0801692991198	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135998	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.22	chr5	+	3131	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	31	288	25	194	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGGTGCACTGTCCT	NA	False	NA	NA	False	AATACA	-14	NA	139136008	139171977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.23	chr5	+	7558	2	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	-5440	-4283	intron_retention	FALSE	non_canonical	0	0	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139147434	139159475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139151274_139155756
ES.27574.24	chr5	+	2233	8	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	-2027	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	113.505191825875	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	19	False	NA	8	True	ATTAAA	-16	NA	139150847	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139151122_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.25	chr5	+	174	1	Intergenic	novelGene_22955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCCTTTAAAGTTGT	3072	False	NA	NA	False	NA	NA	NA	139153900	139154074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139153900_139154100
ES.27574.26	chr5	+	4741	4	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	24450	2	7553	-2	3prime_fragment	FALSE	canonical	3	306	junction_2	15.7691682300198	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCATCTGTGTG	9599	False	NA	9	True	ATTAAA	-17	NA	139160427	139172263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.3	chr5	+	3539	14	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	114.241206464383	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135966	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139141891_139141973_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.4	chr5	+	3239	12	NIC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	92.2608590665754	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135972	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.7	chr5	+	2817	13	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	3	418	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	87.0795852462945	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAGGCTACAGCGTACA	NA	False	NA	NA	False	NA	NA	NA	139135980	139172683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139172312
ES.27574.8	chr5	+	3084	14	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.6006967842017	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGGCCATCTGTGT	NA	False	NA	8	True	ATTAAA	-16	NA	139135980	139172262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139135991_139136350_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ES.27574.9	chr5	+	3493	13	NNC	ENSMUSG00000025857.11	novel	3450	13	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	87.3473271231327	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTATTTGTGTGGCCATC	NA	False	NA	3	True	ATTAAA	-11	NA	139135983	139172257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170532_139171264
ES.27575.1	chr5	-	4836	2	NIC	ENSMUSG00000025855.14	novel	380	2	NA	NA	-21	4273	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	139135733	139129535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139134312_139135673
ES.27575.2	chr5	-	2192	1	Genic_Genomic	ENSMUSG00000086873.2_ENSMUSG00000025855.14	novel	NA	NA	NA	NA	480	290	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTAGTGGGATAATTT	NA	False	NA	NA	False	NA	NA	NA	139135232	139133040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_139133000_139135200
ES.27575.3	chr5	-	1439	2	NNC	ENSMUSG00000086873.2	novel	1354	2	NA	NA	-9	290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTAGTGGGATAATTT	NA	False	NA	NA	False	NA	NA	NA	139136457	139133040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139134312_139136289
ES.27576.1	chr5	-	1587	1	Antisense	novelGene_ENSMUSG00000025857.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	139152266	139150679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_139150700_139152300
ES.27577.1	chr5	+	1504	1	Intergenic	novelGene_22956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAATAATAATAACA	6161	False	NA	NA	False	NA	NA	NA	139173241	139174745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139173200_139174700
ES.27578.1	chr5	+	4467	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	-468	-44	-445	-1	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139185946	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.10	chr5	+	3026	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	-27	1135	-27	62	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186364	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.100	chr5	+	3773	20	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	238.914732294765	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186424	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.101	chr5	+	4375	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	-9	intron_retention	FALSE	canonical	3	224	junction_6	200.796034572399	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTGCATGTGCGATT	NA	False	NA	11	True	AATAAA	-12	NA	139186424	139235541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.103	chr5	+	3758	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	262.453133911561	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186424	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.104	chr5	+	4192	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	303.311570980912	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186424	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139191008_139191213_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.105	chr5	+	3959	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	230.616456727135	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186424	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.106	chr5	+	3758	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	258.196146369383	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGCGATTTCAAGTG	NA	False	NA	-14	True	AATAAA	-19	NA	139186424	139235548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.108	chr5	+	3659	7	FSM	ENSMUSG00000036817.15	ENSMUST00000100517.10	1522	7	3	-2140	1	-352	multi-exon	FALSE	canonical	3	11	junction_6	372.028971392761	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACTTTGACTTTTGCTT	NA	False	NA	NA	False	AAGAAA	-10	NA	139186424	139216235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213287
ES.27578.109	chr5	+	906	7	NNC	ENSMUSG00000036817.15	novel	1522	7	NA	NA	1	19	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	366.601509362232	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCTTTGATAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	139186424	139214114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213919
ES.27578.11	chr5	+	4185	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	241.433909475509	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186374	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226908_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.110	chr5	+	3580	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	290.777846771104	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186424	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.111	chr5	+	3861	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	252.418568625306	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186424	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.112	chr5	+	2591	20	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1	62	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	268.836005371181	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186424	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.114	chr5	+	3769	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	247.197613257086	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	-10	True	AATAAA	-23	NA	139186424	139235552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.116	chr5	+	4140	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	309.085228762135	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	-10	True	AATAAA	-23	NA	139186424	139235552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.117	chr5	+	3987	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	282.384124289581	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCGATTTCAAGTGATT	NA	False	NA	-11	True	AATAAA	-22	NA	139186424	139235551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186451_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.118	chr5	+	3660	20	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	324.330317923955	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186424	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139207192_139207268_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.119	chr5	+	4357	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	354.559323385554	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	-10	True	AATAAA	-23	NA	139186424	139235552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139207526_139207779_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.12	chr5	+	3744	20	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	262.118336177889	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186376	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.121	chr5	+	3825	22	NNC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.415873594809	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186425	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216555_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.123	chr5	+	4097	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	302.915680120326	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186425	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.125	chr5	+	4315	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	322.15149250156	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186426	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.126	chr5	+	3788	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	264.912024929751	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186427	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.127	chr5	+	4206	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	282.647268270666	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186428	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223400_139223558_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.128	chr5	+	4093	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	288.316208055781	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGCTTGTCTTATCTC	NA	False	NA	29	True	AATAAA	-15	NA	139186428	139235591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209332_139209541_139211017_139211217_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.129	chr5	+	2668	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	-1	62	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	282.382980188254	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186428	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.13	chr5	+	4086	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	269.078209159769	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGCGATTTCAAGTG	NA	False	NA	-14	True	AATAAA	-19	NA	139186387	139235548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211204_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.134	chr5	+	3971	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	236.675707447697	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186431	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215582_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.135	chr5	+	4227	24	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	278.008826069247	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186431	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139195948_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.137	chr5	+	4081	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	275.072601235407	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186434	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227787_139231090_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.14	chr5	+	3959	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	227.455841868262	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186387	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.142	chr5	+	4141	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	239.159547700271	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186447	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186519_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.143	chr5	+	4109	23	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	333.707092453425	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186448	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186519_139199865_139199963_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.144	chr5	+	3900	22	NNC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	254.69037714177	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186452	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186519_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.145	chr5	+	3975	22	NNC	ENSMUSG00000036817.15	novel	774	7	NA	NA	40	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	334.965832352402	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186479	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186519_139199865_139199963_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.146	chr5	+	4073	23	NNC	ENSMUSG00000036817.15	novel	774	7	NA	NA	-1859	-7	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	254.984799417307	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139195836	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.147	chr5	+	4158	22	NNC	ENSMUSG00000036817.15	novel	774	7	NA	NA	-1859	2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	291.774965316573	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCGATTTCAAGTGATTA	NA	False	NA	-10	True	AATAAA	-23	NA	139195836	139235552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139196083_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.148	chr5	+	3655	19	ISM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	14510	7	2886	-7	3prime_fragment	FALSE	canonical	3	84	junction_5	212.723382951478	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	253	False	NA	13	True	AATAAA	-14	NA	139200907	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.149	chr5	+	4011	21	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2887	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	261.106391151193	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	254	False	NA	13	True	AATAAA	-14	NA	139200908	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211205_139212444_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.151	chr5	+	4025	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2887	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	298.117639505157	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	254	False	NA	13	True	AATAAA	-14	NA	139200908	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211204_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227787_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.152	chr5	+	2936	22	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	14517	1139	2887	58	3prime_fragment	FALSE	canonical	3	426	junction_6	178.550132063418	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCGGGGAGGCTTTTT	254	False	NA	NA	False	NA	NA	NA	139200908	139234456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.153	chr5	+	3767	20	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	2887	-2	combination_of_known_junctions	FALSE	canonical	3	224	junction_5	252.582703605502	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	254	False	NA	31	True	AATAAA	-17	NA	139200908	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.155	chr5	+	3916	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	2887	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_7	235.685086503156	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	254	False	NA	-12	True	AATAAA	-21	NA	139200908	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.156	chr5	+	3599	20	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	2887	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	268.949078169455	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCGATTTCAAGTGATT	254	False	NA	-11	True	AATAAA	-22	NA	139200908	139235551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.16	chr5	+	4183	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	276.026915758341	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGGCTTGTCTTATC	NA	False	NA	27	True	AATAAA	-13	NA	139186391	139235589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.160	chr5	+	3879	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	2887	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_5	224.319727175298	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	254	False	NA	32	True	AATAAA	-18	NA	139200908	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.162	chr5	+	3916	21	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	2887	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	269.297252121146	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	254	False	NA	-12	True	AATAAA	-21	NA	139200908	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227787_139231090_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.163	chr5	+	3897	20	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	2887	-1	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	228.749775592885	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	254	False	NA	32	True	AATAAA	-18	NA	139200908	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.165	chr5	+	3997	21	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2887	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	288.835783794183	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	254	False	NA	13	True	AATAAA	-14	NA	139200908	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211217_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221469_139222398_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.166	chr5	+	8003	19	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	2887	-7	intron_retention	FALSE	canonical	3	247	junction_12	179.219776796708	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	254	False	NA	13	True	AATAAA	-14	NA	139200908	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.167	chr5	+	3627	22	NNC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	2887	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	299.409494424399	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	254	False	NA	13	True	AATAAA	-14	NA	139200908	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216518_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172_139234929_139235138
ES.27578.169	chr5	+	3605	18	ISM	ENSMUSG00000036817.15	ENSMUST00000110882.8	2454	19	3127	-1195	2887	-2	3prime_fragment	FALSE	canonical	3	54	junction_5	224.26399421295	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	254	False	NA	31	True	AATAAA	-17	NA	139200908	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.170	chr5	+	4020	21	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2888	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	241.066479420097	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGTGCGATTTCAAG	255	False	NA	16	True	AATAAA	-17	NA	139200909	139235546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139201010_139209348_139209541_139211017_139211198_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.172	chr5	+	3688	20	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	2914	-7	combination_of_known_junctions	FALSE	canonical	1	7	junction_17	264.700468360255	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	281	False	NA	13	True	AATAAA	-14	NA	139200935	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139232447_139232616_139233824_139233918_139234172
ES.27578.173	chr5	+	1626	1	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-576	-273	mono-exon	FALSE	NA	NA	NA	NA	NA	1170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAGGAAAAAAAA	9800	False	NA	NA	False	NA	NA	NA	139210454	139212080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139210500_139212100
ES.27578.174	chr5	+	3630	20	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	262.199042618654	1351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139211153	139235595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233905_139234172
ES.27578.175	chr5	+	3762	19	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-166	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	227.238311030513	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	390	False	NA	32	True	AATAAA	-18	NA	139212331	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139212360_139212460_139212641_139215507_139215700_139216362_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.177	chr5	+	3560	15	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	-407	-2	intron_retention	FALSE	canonical	3	547	junction_8	114.886723269808	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	1244	False	NA	31	True	AATAAA	-17	NA	139216451	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.178	chr5	+	4198	14	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	98	-2	intron_retention	FALSE	canonical	3	547	junction_7	119.090438509474	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	1749	False	NA	31	True	AATAAA	-17	NA	139216956	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.179	chr5	+	4854	14	ISM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	30926	7	482	-7	3prime_fragment	FALSE	canonical	3	547	junction_7	100.393486198089	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	2133	False	NA	13	True	AATAAA	-14	NA	139217340	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.18	chr5	+	3828	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186393	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.180	chr5	+	3684	10	NNC	ENSMUSG00000036817.15	novel	2454	19	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	286.395392748651	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	3531	False	NA	-15	True	AATAAA	-18	NA	139221287	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139221487_139222403_139222491_139223633_139223678_139224582_139225635_139226777_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.182	chr5	+	3544	8	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1009	0	intron_retention	FALSE	canonical	3	547	junction_1	128.967326980796	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	4584	False	NA	-12	True	AATAAA	-21	NA	139222340	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.19	chr5	+	4091	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	289.80834718685	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186393	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219749_139219848_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.2	chr5	+	4553	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	-420	1	-420	-1	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139185971	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.20	chr5	+	1352	7	NNC	ENSMUSG00000036817.15	novel	1522	7	NA	NA	2	443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	484.339670754592	1197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATAGGTGTTTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	139186393	139214538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186451_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139213919
ES.27578.21	chr5	+	4152	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	232.667126460824	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186393	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216506_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.24	chr5	+	3389	18	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	258.574264997565	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGCGATTTCAAGTG	NA	False	NA	-14	True	AATAAA	-19	NA	139186394	139235548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.25	chr5	+	3702	19	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.808537185835	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186395	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139209265_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.26	chr5	+	3759	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	-1	-44	-1	-1	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186396	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.28	chr5	+	3999	21	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	313.950230928407	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGCTTGTCTTATCTC	NA	False	NA	29	True	AATAAA	-15	NA	139186397	139235591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.29	chr5	+	4116	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	256.266469522176	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTTATCTCTGCCCA	NA	False	NA	35	True	AATAAA	-21	NA	139186397	139235597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211207_139212448_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.3	chr5	+	4339	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-440	-1291	-397	0	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139185994	139235595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.30	chr5	+	2936	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	5	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	237.218261104327	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTCTGAGGCTGTGCGT	NA	False	NA	NA	False	AATAAA	-27	NA	139186402	139234421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211217_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.31	chr5	+	2851	22	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	263.021196217841	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGACGTGCTGAGTCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	139186403	139234408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.37	chr5	+	4144	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	239.009184961306	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186405	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.38	chr5	+	7771	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	-5	-8	intron_retention	FALSE	canonical	0	0	junction_2	251.410714767688	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCATGTGCGATTT	NA	False	NA	12	True	AATAAA	-13	NA	139186409	139235542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209332_139209541_139211017_139211203_139212332_139212360_139212460_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.4	chr5	+	4036	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	-369	1	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCTTATCTCTGCCC	NA	False	NA	34	True	AATAAA	-20	NA	139186022	139235596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.41	chr5	+	4196	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	235.745853490611	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186409	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209265_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.42	chr5	+	4097	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	237.218261104327	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186412	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211217_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.44	chr5	+	3923	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	290.74157463827	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCATGTGCGATTT	NA	False	NA	12	True	AATAAA	-13	NA	139186412	139235542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.46	chr5	+	3989	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	274.384630801061	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186414	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213919_139214042_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.47	chr5	+	4878	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_1	256.721692131546	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186416	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186451_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.49	chr5	+	3568	18	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	309.183756293421	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186421	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211217_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.50	chr5	+	3845	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-1	combination_of_known_splicesites	TRUE	canonical	3	12	junction_6	225.839295739249	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186421	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.51	chr5	+	2777	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-13	-156	0	62	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186421	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.53	chr5	+	3989	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	275.647734381017	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186421	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.54	chr5	+	3626	21	NIC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	264.510770102089	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCGATTTCAAGTGA	NA	False	NA	-13	True	AATAAA	-20	NA	139186421	139235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.55	chr5	+	4916	22	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-4	intron_retention	FALSE	canonical	3	14	junction_1	303.392032894047	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGTGCGATTTCAAG	NA	False	NA	16	True	AATAAA	-17	NA	139186421	139235546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.56	chr5	+	3812	20	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	278.326050849929	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186421	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226908_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.57	chr5	+	2998	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	64	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	239.009184961306	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAGGCTTTTTTAATTC	NA	False	NA	NA	False	NA	NA	NA	139186421	139234462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.58	chr5	+	4031	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	235.316935041563	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186421	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209420_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.59	chr5	+	3890	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	275.547346203878	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186421	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.6	chr5	+	3742	19	NNC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	-85	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	280.328973410408	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186306	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.60	chr5	+	3776	21	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	319.103505934987	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186422	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139216527_139216598_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.62	chr5	+	4029	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	297.035309696695	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186422	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195127_139195298_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.63	chr5	+	3998	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	311.594648873519	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCGATTTCAAGTGA	NA	False	NA	-13	True	AATAAA	-20	NA	139186422	139235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.65	chr5	+	3935	22	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	314.834974589053	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCGATTTCAAGTGA	NA	False	NA	-13	True	AATAAA	-20	NA	139186422	139235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.66	chr5	+	4080	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	299.131307716525	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGCGATTTCAAGTGA	NA	False	NA	-13	True	AATAAA	-20	NA	139186422	139235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139195948_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.67	chr5	+	4388	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-3	intron_retention	FALSE	canonical	3	426	junction_7	173.668540342694	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTTGTCTTATCTCT	NA	False	NA	30	True	AATAAA	-16	NA	139186422	139235592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.69	chr5	+	3130	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	282.34976767185	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186422	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139194417_139194580_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.7	chr5	+	6984	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	247	junction_15	201.871931293062	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGCATGTGCGATTT	NA	False	NA	12	True	AATAAA	-13	NA	139186352	139235542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.70	chr5	+	4313	6	FSM	ENSMUSG00000036817.15	ENSMUST00000142473.8	2168	6	1	-2146	1	-347	multi-exon	FALSE	canonical	3	597	junction_1	167.541039748475	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTTTTGCTTATTAC	NA	False	NA	NA	False	AAGAAA	-15	NA	139186422	139216240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460
ES.27578.71	chr5	+	5209	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_14	248.122720349712	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCGATTTCAAGTGATT	NA	False	NA	-11	True	AATAAA	-22	NA	139186422	139235551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139222491_139223400_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.72	chr5	+	4030	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	243.015019261726	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186422	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221267_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.73	chr5	+	4961	18	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	84	junction_4	245.034338388764	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.74	chr5	+	2611	6	FSM	ENSMUSG00000036817.15	ENSMUST00000142473.8	2168	6	1	-444	1	443	multi-exon	FALSE	canonical	3	597	junction_1	167.541039748475	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATAGGTGTTTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	139186422	139214538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460
ES.27578.75	chr5	+	4036	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	260.174675113178	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186422	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216981_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.76	chr5	+	2921	14	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	3306	intron_retention	FALSE	canonical	3	33	junction_7	265.980334727097	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGTGAGTGCTGGT	NA	False	NA	NA	False	NA	NA	NA	139186422	139224686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139223678_139224582
ES.27578.77	chr5	+	4191	23	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	298.589563234764	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186422	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.78	chr5	+	3456	19	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	338.546042421863	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTCTTATCTCTG	NA	False	NA	31	True	AATAAA	-17	NA	139186422	139235593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219655_139219750_139220269_139220329_139220441_139220588_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.80	chr5	+	3903	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	299.377900821019	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGCGATTTCAAGTG	NA	False	NA	-14	True	AATAAA	-19	NA	139186422	139235548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.82	chr5	+	4346	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.445789933109	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.83	chr5	+	7792	21	NNC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	82	junction_3	216.591199036341	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGTCTTATCTCTGC	NA	False	NA	32	True	AATAAA	-18	NA	139186422	139235594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.85	chr5	+	3852	22	NNC	ENSMUSG00000036817.15	novel	2608	22	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	247.523717913466	1352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	False	NA	13	True	AATAAA	-14	NA	139186423	139235543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.86	chr5	+	7641	20	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_6	188.901108543238	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186423	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.87	chr5	+	3844	21	NIC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	267.028350554768	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186423	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.92	chr5	+	3933	21	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	262.03993493359	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186423	139235550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211217_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.93	chr5	+	2496	19	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	62	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	252.672438368555	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186423	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.95	chr5	+	4070	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	235.745853490611	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186423	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209332_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.96	chr5	+	2856	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	9	1090	0	62	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGAGGCTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	139186423	139234460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.97	chr5	+	4118	22	NNC	ENSMUSG00000036817.15	novel	3955	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	330.549991759422	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGTGCGATTTCAAGT	NA	False	NA	-15	True	AATAAA	-18	NA	139186423	139235547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27578.98	chr5	+	3713	20	NIC	ENSMUSG00000036817.15	novel	3714	20	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	275.92864106223	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTGCGATTTCAAGTG	NA	False	NA	-14	True	AATAAA	-19	NA	139186423	139235548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ES.27579.1	chr5	-	2351	1	Antisense	novelGene_ENSMUSG00000036817.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTCTCTTCAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	139186651	139184300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_139184300_139186700
ES.2758.1	chr10	+	212	1	Intergenic	novelGene_2101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTTATAAAATCACCA	NA	False	NA	NA	False	NA	NA	NA	49453856	49454068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_49453900_49454100
ES.27580.1	chr5	-	2946	1	Intergenic	novelGene_22957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139191871	139188925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139188900_139191900
ES.27581.1	chr5	+	1482	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-98	723	-98	-1	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTGTCTCTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-30	NA	139237980	139255083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.10	chr5	+	1342	9	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	400.503257633443	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCATCCTTGTCTCTGC	NA	False	NA	NA	False	AATAAA	-24	NA	139238131	139255077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251364_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.11	chr5	+	2067	9	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	400.503257633443	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238134	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251364_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.13	chr5	+	2830	8	ISM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	57	725	11	-3	intron_retention	FALSE	canonical	3	1128	junction_6	49.0068716547767	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCTTGTCTCTGCTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	139238135	139255081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157
ES.27581.14	chr5	+	5364	6	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	13	-2	intron_retention	FALSE	canonical	3	1098	junction_5	51.3380950172482	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCAGTAGTCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	139238137	139255804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139253058_139253157_139253231_139254735
ES.27581.15	chr5	+	5041	6	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_1	593.186985696753	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238142	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139238375_139242931_139243006_139248235_139248315_139248624_139248707_139249233_139249384_139251381
ES.27581.16	chr5	+	4616	6	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	32	-9	intron_retention	FALSE	canonical	3	1098	junction_5	51.3380950172482	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCCATCCTTGTCTCT	NA	False	NA	NA	False	AATAAA	-22	NA	139238156	139255075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139253058_139253157_139253231_139254735
ES.27581.17	chr5	+	3616	7	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	32	0	intron_retention	FALSE	canonical	3	1173	junction_4	37.1232930771085	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238156	139255806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157
ES.27581.18	chr5	+	2884	7	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	41	-1	intron_retention	FALSE	canonical	3	1173	junction_4	37.1232930771085	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTGTCTCTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-30	NA	139238165	139255083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157
ES.27581.19	chr5	+	4015	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1098	junction_7	62.9272336488255	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238167	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.2	chr5	+	1470	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTGTCTCTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-30	NA	139238074	139255083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
ES.27581.20	chr5	+	4090	7	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	49	-2	intron_retention	FALSE	canonical	3	1098	junction_6	59.4156732034757	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGCAGTAGTCCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	139238173	139255804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139251521_139252758_139253058_139253157_139253231_139254735
ES.27581.21	chr5	+	3462	6	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	52	-5	intron_retention	FALSE	canonical	3	1098	junction_5	64.9781501737315	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATCCTTGTCTCTGCTT	NA	False	NA	NA	False	AATAAA	-26	NA	139238176	139255079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139251521_139252758_139253231_139254735
ES.27581.22	chr5	+	5688	5	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	58	0	intron_retention	FALSE	canonical	3	1211	junction_1	32.9725264424793	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238182	139255806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139251521_139252758
ES.27581.25	chr5	+	5832	5	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	70	-4	intron_retention	FALSE	canonical	3	1098	junction_4	52.6230700358692	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTTGCAGTAGTCCTT	NA	False	NA	NA	False	AATAAA	-11	NA	139238194	139255802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139253058_139253157_139253231_139254735
ES.27581.26	chr5	+	4533	9	NNC	ENSMUSG00000025858.13	novel	1167	3	NA	NA	286	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	399.151521981315	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCCATCCTTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	139239551	139255074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139243006_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.27	chr5	+	5182	3	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	-3335	0	intron_retention	FALSE	canonical	3	1223	junction_2	37	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139249286	139255806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139251521_139252758_139253058_139253157
ES.27581.3	chr5	+	2109	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	-3	1	-3	-1	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238075	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27581.4	chr5	+	2183	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	5	-1	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238083	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
ES.27581.6	chr5	+	2170	8	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	5	junction_4	427.085758247637	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238113	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251364_139251521_139252758_139253058_139253157_139253231_139254735
ES.27581.8	chr5	+	2158	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1098	junction_7	63.0730059663613	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGCAGTAGTCCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	139238124	139255803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253231_139254735
ES.27581.9	chr5	+	2010	9	NNC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	400.830388069567	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGTAGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	139238131	139255805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251424_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ES.27582.1	chr5	+	1211	1	Intergenic	novelGene_22958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCACACAGCAGCACAGA	6685	False	NA	NA	False	NA	NA	NA	139263319	139264530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139263300_139264500
ES.27582.2	chr5	+	175	1	Intergenic	novelGene_22959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAGAAA	7188	False	NA	NA	False	NA	NA	NA	139263822	139263997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139263800_139264000
ES.27583.1	chr5	+	176	1	Intergenic	novelGene_22960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139296792	139296968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139296800_139297000
ES.27584.1	chr5	-	4518	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	34	-1995	34	1995	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTAGCGTGGGTACTG	4992	False	NA	NA	False	AATAAA	-20	NA	139311343	139255635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.10	chr5	-	3116	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	74	-7	intron_retention	FALSE	canonical	3	178	junction_9	24.5361914599235	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCCCTTCTGTGTGTT	5032	False	NA	-12	True	AATAAA	-13	NA	139311303	139257637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139258832_139259089_139259319_139259489_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.11	chr5	-	2210	9	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	80	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	70.5797421361115	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCCCTTCTGTGTGTT	5038	False	NA	-12	True	AATAAA	-13	NA	139311297	139257637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.13	chr5	-	2146	11	NNC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	142	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	65.0677339393343	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCCCTTCTGTGTGTT	5100	False	NA	-12	True	AATAAA	-13	NA	139311235	139257637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139258570_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.14	chr5	-	2689	11	NNC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	-126	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	65.6006097532637	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCCCTTCTGTGTGTT	4832	False	NA	-12	True	AATAAA	-13	NA	139311503	139257637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265424_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.15	chr5	-	3725	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	-127	-8	intron_retention	FALSE	canonical	3	178	junction_9	24.8997991959775	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTGTCCCTTCTGTGTGT	4831	False	NA	-13	True	AATAAA	-12	NA	139311504	139257638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.16	chr5	-	4628	4	NNC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	118	-8520	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	101.479061879779	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGCGCTATAACATGGC	5076	False	NA	NA	False	NA	NA	NA	139311259	139274796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139278974_139288058_139288151_139293496_139293628_139311031
ES.27584.17	chr5	-	6222	1	NIC	ENSMUSG00000056413.17	novel	2155	11	NA	NA	7883	-8524	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCAAGCGCTATAACA	NA	False	NA	NA	False	NA	NA	NA	139281022	139274800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139274800_139281000
ES.27584.19	chr5	-	3888	5	NNC	ENSMUSG00000056413.17	novel	2155	11	NA	NA	114	-8568	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	90.6559429932754	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCGAAAAACCAAA	5072	False	NA	NA	False	NA	NA	NA	139311263	139274844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139278017_139278708_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.3	chr5	-	2725	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	-167	-1	-167	1	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTGTTTATGGCTC	4791	False	NA	-4	True	AATAAA	-21	NA	139311544	139257629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.4	chr5	-	2383	11	NNC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	7649	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	66.9704412408937	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	2555	False	NA	-5	True	AATAAA	-20	NA	139303728	139257630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139303560
ES.27584.5	chr5	-	2539	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	-113	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	64.29407744934	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4845	False	NA	-5	True	AATAAA	-20	NA	139311490	139257630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139311035
ES.27584.6	chr5	-	2761	10	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	53	-1	intron_retention	FALSE	canonical	3	178	junction_9	23.5843639350783	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGTGTTTATGGC	5011	False	NA	-6	True	AATAAA	-19	NA	139311324	139257631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.7	chr5	-	3735	9	NIC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	127	-2	intron_retention	FALSE	canonical	3	178	junction_8	24.9621588609639	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCTGTGTGTTTATGG	5085	False	NA	-7	True	AATAAA	-18	NA	139311250	139257632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27584.8	chr5	-	2101	6	NNC	ENSMUSG00000056413.17	novel	1402	10	NA	NA	-751	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.1726796531986	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCTGTGTGTTTATGG	NA	False	NA	-7	True	AATAAA	-18	NA	139261147	139257632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139260693
ES.27584.9	chr5	-	2477	11	NNC	ENSMUSG00000056413.17	novel	2557	11	NA	NA	69	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.6314711095218	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTCTGTGTGTTTATG	5027	False	NA	-8	True	AATAAA	-17	NA	139311308	139257633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139258832_139259097_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ES.27585.1	chr5	-	1324	5	NNC	ENSMUSG00000045438.13	novel	344	4	NA	NA	-6	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.9568711386159	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-4	True	TTTAAA	-22	NA	139330926	139323341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139324131_139324936_139325141_139325219_139325339_139328317_139328430_139330826
ES.27585.2	chr5	-	1000	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	63	1398	-5	235	multi-exon	FALSE	canonical	3	183	junction_2	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	-4	True	TTTAAA	-22	NA	139330925	139323341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139324131_139328317_139328430_139330826
ES.27585.3	chr5	-	788	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	41	1632	-15	1	multi-exon	FALSE	canonical	3	183	junction_2	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTGGCTTTTGACA	NA	False	NA	-17	True	AATACA	-15	NA	139330947	139323575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139324131_139328317_139328430_139330826
ES.27585.4	chr5	-	1172	1	NIC	ENSMUSG00000045438.13	novel	2461	3	NA	NA	583	1	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTGGCTTTTGACA	1024	False	NA	-17	True	AATACA	-15	NA	139324747	139323575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139323600_139324700
ES.27585.5	chr5	-	177	1	Intergenic	novelGene_22961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139326917	139326740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139326700_139326900
ES.27586.1	chr5	+	158	1	Intergenic	novelGene_22962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	139334082	139334240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139334100_139334200
ES.27587.1	chr5	+	4084	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	73	0	73	0	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTTCCCTTTATGTTT	1428	False	NA	5	True	ATTAAA	-18	NA	139366408	139382170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139366499_139378176
ES.27588.1	chr5	+	2389	1	Intergenic	novelGene_22963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	7640	False	NA	NA	False	NA	NA	NA	139430836	139433225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139430800_139433200
ES.27589.1	chr5	-	1559	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-6	-124	3	124	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACCTTTGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	139446263	139345369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ES.27589.10	chr5	-	1604	5	NNC	ENSMUSG00000053553.12	novel	1429	5	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_2	284.626948829516	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTATTCCTGACTTTT	NA	False	NA	-14	True	NA	NA	NA	139446291	139345501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139346486_139347061_139347293_139349727_139349919_139441171_139441302_139446223
ES.27589.11	chr5	-	887	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-11	553	-2	-553	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGCTTTCCCCATCAG	NA	False	NA	NA	False	NA	NA	NA	139446268	139346046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ES.27589.12	chr5	-	2984	1	FSM	ENSMUSG00000065593.3	ENSMUST00000083659.3	96	1	-2525	-363	-2525	363	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCCCCTCTCTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	139358025	139355041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139355000_139358000
ES.27589.13	chr5	-	3195	1	Intergenic	novelGene_22964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACTTAACAGTCACGAAAA	NA	False	NA	NA	False	NA	NA	NA	139441141	139437946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139437900_139441100
ES.27589.2	chr5	-	1558	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	-128	-1	-103	1	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTTGCCTGTCT	NA	False	NA	-5	True	NA	NA	NA	139446385	139345492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ES.27589.5	chr5	-	2022	4	FSM	ENSMUSG00000053553.12	ENSMUST00000198474.2	2030	4	6	2	6	-2	multi-exon	FALSE	canonical	3	675	junction_3	29.698484809835	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGACTTTTTGCCTG	NA	False	NA	-8	True	NA	NA	NA	139446276	139345495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139347144_139349727_139349919_139441171_139441302_139446223
ES.27589.6	chr5	-	1323	4	NNC	ENSMUSG00000053553.12	novel	1429	5	NA	NA	83311	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	334.274670825589	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCTGACTTTTTGCCT	NA	False	NA	-9	True	NA	NA	NA	139357974	139345496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139346486_139347061_139347144_139349727_139349919_139357913
ES.27589.7	chr5	-	1568	6	NNC	ENSMUSG00000053553.12	novel	1429	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	341.794909265776	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCTGACTTTTTGCCT	NA	False	NA	-9	True	NA	NA	NA	139446269	139345496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139346486_139347061_139347144_139349727_139349919_139423218_139423349_139441171_139441302_139446223
ES.27589.8	chr5	-	1436	5	NNC	ENSMUSG00000053553.12	novel	1429	5	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	302.457744982667	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCCTGACTTTTTGCCT	NA	False	NA	-9	True	NA	NA	NA	139446273	139345496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139346486_139347061_139347144_139349727_139349913_139441171_139441302_139446223
ES.2759.1	chr10	-	3981	7	NNC	ENSMUSG00000056073.17	novel	2085	8	NA	NA	7	-25472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCAAATCCTTATCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	49664843	49397007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_49399952_49404082_49404137_49411413_49411596_49449659_49449920_49546658_49546679_49659240_49659642_49664723
ES.27590.1	chr5	-	3124	7	FSM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	51	-6	19	6	multi-exon	FALSE	canonical	3	27	junction_6	14.7271480229163	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGTTTCTCTAAATAAC	8728	False	NA	0	True	AATAAA	-30	NA	139470253	139456959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
ES.27590.2	chr5	-	3165	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	-34	-10	-2	5	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAGTTTCTCTAAATAA	8675	False	NA	-1	True	AATAAA	-29	NA	139470306	139456960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ES.27590.4	chr5	-	2970	6	NIC	ENSMUSG00000053581.14	novel	3169	7	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.677837739118	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCATTTTTTATTCTAG	8798	False	NA	-18	True	AATAAA	-12	NA	139470183	139456977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139459310_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
ES.27590.5	chr5	-	1748	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	76	1297	-13	-1297	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTCTGGTTTTGCCA	8785	False	NA	NA	False	AAGAAA	-14	NA	139470196	139458267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ES.27591.1	chr5	+	158	2	Intergenic	novelGene_22965	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	103	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAATTTTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	139470809	139497755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139470860_139497647
ES.27591.2	chr5	+	151	1	Intergenic	novelGene_22966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	139470811	139470962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139470800_139471000
ES.27592.1	chr5	+	152	1	Intergenic	novelGene_22967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	139519169	139519321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139519200_139519300
ES.27593.1	chr5	-	187	1	Intergenic	novelGene_22968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTCAGCAAGTAAGCC	NA	False	NA	NA	False	NA	NA	NA	139563858	139563671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139563700_139563900
ES.27594.1	chr5	+	176	1	Intergenic	novelGene_22969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	139649272	139649448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139649300_139649400
ES.27595.1	chr5	-	3341	17	FSM	ENSMUSG00000036718.18	ENSMUST00000044642.14	3346	17	9	-4	9	4	multi-exon	FALSE	canonical	1	5	junction_8	4.83476990145343	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTGTGTGTGTCACCG	NA	False	NA	0	True	AATAAA	-19	NA	139722082	139692446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
ES.27595.2	chr5	-	3295	17	NNC	ENSMUSG00000036718.18	novel	3346	17	NA	NA	24	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.50840802347241	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTGTGTGTGTCACC	NA	False	NA	-1	True	AATAAA	-18	NA	139722067	139692447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139692665_139692816_139692864_139694640_139694756_139695300_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
ES.27595.3	chr5	-	3348	17	NNC	ENSMUSG00000036718.18	novel	3157	17	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.50960828314577	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGTTGCCTGTGTGTGT	NA	False	NA	-5	True	AATAAA	-14	NA	139718576	139692451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139718254
ES.27595.4	chr5	-	4084	16	NIC	ENSMUSG00000036718.18	novel	3346	17	NA	NA	21	-1	intron_retention	FALSE	canonical	1	5	junction_8	4.81202198203162	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGTTGCCTGTGTGTGT	NA	False	NA	-5	True	AATAAA	-14	NA	139722070	139692451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
ES.27596.12	chr5	-	2081	13	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-2736	0	intron_retention	FALSE	canonical	0	0	junction_10	76.7953177826183	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139743469	139737036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342
ES.27596.14	chr5	-	6984	48	NIC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-66	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	58.2642083266648	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGGTGTCCTGTGTTG	NA	False	NA	-10	True	AATGAA	-18	NA	139761495	139737037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
ES.27596.15	chr5	-	7376	44	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_11	49.7672788521564	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGGTGTCCTGTGTTG	NA	False	NA	-10	True	AATGAA	-18	NA	139761415	139737037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.17	chr5	-	2357	17	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-3509	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	88.4167820255295	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTGTCCTGTGTT	NA	False	NA	-11	True	AATGAA	-17	NA	139744242	139737038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741026_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184
ES.27596.2	chr5	-	7083	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-41	5	intron_retention	TRUE	canonical	0	0	junction_11	55.1319777592335	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCCTGTGTTGTCCCTG	NA	False	NA	-4	True	AATGAA	-24	NA	139761470	139737031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743665_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.20	chr5	-	7100	47	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_11	59.6848370455755	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTGTCCTGTGTT	NA	False	NA	-11	True	AATGAA	-17	NA	139761404	139737038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757695_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.22	chr5	-	6956	48	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-45	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	53.7207540951566	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGGTGTCCTGTGTT	NA	False	NA	-11	True	AATGAA	-17	NA	139761474	139737038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
ES.27596.23	chr5	-	7081	47	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_11	61.7044337593147	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761404	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748094_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.25	chr5	-	5735	32	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	60	0	intron_retention	FALSE	canonical	0	0	junction_10	65.6682609749924	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139753593	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139740855_139740931_139741026_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475
ES.27596.26	chr5	-	6596	44	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	45.8431851024262	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761426	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737207_139738512_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.27	chr5	-	3287	8	NIC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	-1489	0	intron_retention	FALSE	canonical	0	0	junction_7	95.6537121760636	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139742222	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139738047_139738466_139739329_139739828_139741066_139741631_139741756_139741889_139742117_139742198
ES.27596.29	chr5	-	7190	46	NIC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	48.7517976876523	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761427	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.31	chr5	-	6928	48	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	60.1884320425684	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761429	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
ES.27596.33	chr5	-	7111	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_11	55.1470323733211	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761422	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757695_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.35	chr5	-	7176	46	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	49.830200570426	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761427	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742114_139742194_139742287_139742815_139742947_139743342_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.36	chr5	-	6801	48	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	60.8415258110358	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761416	139737039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760226_139761086_139761186_139761375
ES.27596.41	chr5	-	8162	44	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_11	50.6997332630808	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGTGGTGTCCTGT	NA	False	NA	-14	True	AATGAA	-14	NA	139761404	139737041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.43	chr5	-	7056	47	NNC	ENSMUSG00000029547.11	novel	7070	47	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_40	58.4940216356146	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGTGGTGTCCTGT	NA	False	NA	-14	True	AATGAA	-14	NA	139761416	139737041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742194_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757342_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.44	chr5	-	7187	46	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_11	51.3811033141346	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGTGGTGTCCTGT	NA	False	NA	-14	True	AATGAA	-14	NA	139761414	139737041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.45	chr5	-	7031	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_11	57.2456196060727	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGTGGTGTCCTGT	NA	False	NA	-14	True	AATGAA	-14	NA	139761416	139737041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743665_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.47	chr5	-	7135	46	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-13	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	55.0421880845575	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTGTGTGGTGTCCTG	NA	False	NA	-15	True	AATGAA	-13	NA	139761406	139737042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750966_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.48	chr5	-	6980	48	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-61	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.8695126571285	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTGTGTGGTGTCCTG	NA	False	NA	-15	True	AATGAA	-13	NA	139761490	139737042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086_139761186_139761375
ES.27596.5	chr5	-	2151	9	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-1025	0	intron_retention	FALSE	canonical	3	59	junction_5	71.442284397967	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139741758	139737036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139740855_139740931_139741066_139741631
ES.27596.50	chr5	-	2050	9	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-943	-3	intron_retention	FALSE	canonical	3	140	junction_5	48.9832560677626	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGTGGTGTCCT	NA	False	NA	-16	True	AATGAA	-12	NA	139741676	139737043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139740855_139740931_139741066_139741631
ES.27596.52	chr5	-	7049	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-16	-3	intron_retention	FALSE	canonical	0	0	junction_11	55.1470323733211	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGTGGTGTCCT	NA	False	NA	-16	True	AATGAA	-12	NA	139761409	139737043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757650_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.6	chr5	-	7170	47	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-49	0	intron_retention	FALSE	non_canonical	0	0	junction_11	56.6553270836602	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761478	139737036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739203_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.7	chr5	-	7702	45	NIC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_11	49.0824277185206	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761396	139737036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ES.27596.8	chr5	-	6829	45	NNC	ENSMUSG00000029547.11	novel	7102	47	NA	NA	1101	0	intron_retention	FALSE	canonical	0	0	junction_11	55.4549692606756	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139760292	139737036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757695_139757771_139757932_139758110_139758249_139758352_139758550_139760042
ES.27597.1	chr5	+	233	1	Intergenic	novelGene_22970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCACAGCTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	139764822	139765055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139764800_139765100
ES.27598.1	chr5	+	177	1	Intergenic	novelGene_22971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTACT	NA	False	NA	NA	False	NA	NA	NA	139774037	139774214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139774000_139774200
ES.27599.1	chr5	+	2862	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	-13	0	-13	0	multi-exon	FALSE	canonical	3	22	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGGATGGTGC	NA	False	NA	16	True	AATAAA	-21	NA	139777254	139788408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139777468_139784893_139784974_139785839
ES.27599.2	chr5	+	2723	4	NNC	ENSMUSG00000018143.11	novel	2849	3	NA	NA	-4	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	11.1455023315337	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTCTGGTGTCTGGAT	NA	False	NA	11	True	AATAAA	-16	NA	139777284	139788403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139777468_139784893_139784974_139785839_139787706_139787809
ES.27599.3	chr5	+	2719	4	NNC	ENSMUSG00000018143.11	novel	2849	3	NA	NA	-1	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	11.1455023315337	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCTGGTGTCTGGATG	NA	False	NA	12	True	AATAAA	-17	NA	139777287	139788404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_139777468_139784893_139784974_139785839_139787746_139787851
ES.276.1	chr1	-	6623	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	7	1078	intron_retention	FALSE	non_canonical	0	0	junction_7	64.3837347947636	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTTTGATTTTTCGAA	NA	False	NA	NA	False	AATAAA	-23	NA	36484331	36457873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484136
ES.276.10	chr1	-	6412	7	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	4	970	intron_retention	FALSE	canonical	2	10	junction_4	83.372157622714	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	36484334	36457981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482600_36482691_36484130
ES.276.11	chr1	-	5560	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	-2196	0	2	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGAGTTTCTACTCCCTG	NA	False	NA	1	True	AATAAA	-18	NA	36484338	36458949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.12	chr1	-	5565	5	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	1686	2	intron_retention	FALSE	canonical	2	10	junction_3	72.8435824215147	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGAGTTTCTACTCCCTG	NA	False	NA	1	True	AATAAA	-18	NA	36482652	36458949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571
ES.276.13	chr1	-	5476	7	FSM	ENSMUSG00000001143.14	ENSMUST00000001171.13	2174	7	15	-3317	1	2	multi-exon	FALSE	canonical	2	10	junction_4	67.569717082926	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGAGTTTCTACTCCCTG	NA	False	NA	1	True	AATAAA	-18	NA	36484337	36458949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
ES.276.15	chr1	-	1087	8	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	59.6068753738756	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGAGTTTCTACTCCC	NA	False	NA	-1	True	AATAAA	-16	NA	36484335	36458951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.16	chr1	-	5891	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGAGTTTCTACTCCC	NA	False	NA	-1	True	AATAAA	-16	NA	36484337	36458951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.17	chr1	-	5366	7	NNC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.9193595258414	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGAGTTTCTACTCCC	NA	False	NA	-1	True	AATAAA	-16	NA	36484255	36458951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478715_36478808_36482571_36482691_36484130
ES.276.18	chr1	-	994	7	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	81.5381642068438	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGAGAGTTTCTACTC	NA	False	NA	-3	True	AATAAA	-14	NA	36484327	36458953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
ES.276.19	chr1	-	3257	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.3070939645977	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGTGATCTCTAAACA	NA	False	NA	NA	False	AATAGA	-24	NA	36484337	36461134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463468_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.2	chr1	-	6570	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	33	1074	intron_retention	FALSE	canonical	3	12	junction_6	65.1654096299939	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGACCTTTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36484305	36457877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
ES.276.20	chr1	-	3702	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	4	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGTCAGAAGTGATCT	NA	False	NA	NA	False	AATAGA	-17	NA	36484338	36461141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.21	chr1	-	3365	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	15	-2	1	2	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTTGTCAGAAGTGAT	NA	False	NA	NA	False	AATAGA	-15	NA	36484337	36461143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.22	chr1	-	3097	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	-41	322	-41	-322	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTGCATCCTGCCCCA	NA	False	NA	NA	False	ATTAAA	-20	NA	36484393	36461467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.23	chr1	-	3389	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	-323	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCTGCATCCTGCCCC	NA	False	NA	NA	False	ATTAAA	-19	NA	36484352	36461468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.24	chr1	-	2245	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1119	0	2	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGCTCAGTGGCCTT	NA	False	NA	-1	True	CATAAA	-23	NA	36484338	36462264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.25	chr1	-	2308	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.3837347947636	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGCTCAGTGGCCTT	NA	False	NA	-1	True	CATAAA	-23	NA	36484334	36462264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482758_36484130
ES.276.26	chr1	-	2192	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	24	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	65.1654096299939	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGCTCAGTGGCCTT	NA	False	NA	-1	True	CATAAA	-23	NA	36484314	36462264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
ES.276.28	chr1	-	5924	6	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_4	73.9150864167796	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484338	36462266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36482691_36484130
ES.276.29	chr1	-	2118	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.6437245381104	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGTTCTGGCTCAGTG	NA	False	NA	-6	True	CATAAA	-18	NA	36484338	36462269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463463_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.3	chr1	-	6632	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	-3268	0	1074	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGACCTTTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36484338	36457877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.30	chr1	-	3025	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	5	-3	intron_retention	FALSE	canonical	3	121	junction_1	30.5705013952267	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGTTCTGGCTCAGTG	NA	False	NA	-6	True	CATAAA	-18	NA	36484347	36462269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36478808_36482571_36482691_36484130
ES.276.31	chr1	-	2574	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGTTCTGGCTCAGTG	NA	False	NA	-6	True	CATAAA	-18	NA	36484338	36462269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.32	chr1	-	2199	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.0382163320266	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGAGTTCTGGCTCAG	NA	False	NA	-8	True	CATAAA	-16	NA	36484308	36462271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478698_36478808_36482571_36482691_36484130
ES.276.33	chr1	-	2126	7	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	10	junction_4	83.372157622714	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGAGTTCTGGCTCAG	NA	False	NA	-8	True	CATAAA	-16	NA	36484338	36462271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482600_36482691_36484130
ES.276.34	chr1	-	1461	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	65.9619556398742	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGAGTTCTGGCTCAG	NA	False	NA	-8	True	CATAAA	-16	NA	36484335	36462271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36462811_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.35	chr1	-	2488	6	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	1	-5	intron_retention	FALSE	canonical	2	10	junction_3	73.0791351891906	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGAGTTCTGGCTCAG	NA	False	NA	-8	True	CATAAA	-16	NA	36484337	36462271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
ES.276.36	chr1	-	2238	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.6437245381104	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCATGAGTTCTGGCTC	NA	False	NA	-10	True	CATAAA	-14	NA	36484346	36462273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463579_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.37	chr1	-	5601	8	NNC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.9915700263002	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCATGAGTTCTGGCTC	NA	False	NA	-10	True	CATAAA	-14	NA	36484338	36462273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36479206_36482691_36484130
ES.276.38	chr1	-	2119	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	14	1245	0	-124	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTGCTCACCTATCT	NA	False	NA	NA	False	NA	NA	NA	36484338	36462390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.4	chr1	-	6965	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	1	1074	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGACCTTTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36484337	36457877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.5	chr1	-	6879	6	NIC	ENSMUSG00000001143.14	novel	2174	7	NA	NA	4	1074	intron_retention	FALSE	canonical	2	10	junction_3	73.0791351891906	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGACCTTTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36484334	36457877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36478689_36478808_36482571_36482691_36484130
ES.276.6	chr1	-	6699	9	NNC	ENSMUSG00000001143.14	novel	2290	9	NA	NA	4	1072	intron_retention	FALSE	canonical	0	0	junction_6	82.3878024952723	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTGACCTTTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	36484334	36457879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36479206_36479309_36482600_36482691_36484130
ES.276.7	chr1	-	6864	7	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	0	972	intron_retention	FALSE	canonical	3	153	junction_5	19.8997487421324	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	36484338	36457979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.276.8	chr1	-	6497	8	NIC	ENSMUSG00000001143.14	novel	3378	8	NA	NA	3	971	intron_retention	FALSE	canonical	3	12	junction_6	65.1654096299939	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	36484335	36457980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482600_36482691_36484130
ES.276.9	chr1	-	6531	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	11	-3164	-3	970	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	36484341	36457981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ES.2760.1	chr10	+	175	1	Intergenic	novelGene_2102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGGAGATAACCC	NA	False	NA	3	True	NA	NA	NA	49677738	49677913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_49677700_49677900
ES.27600.1	chr5	-	2987	9	FSM	ENSMUSG00000036687.14	ENSMUST00000044002.10	2039	9	30	-978	30	978	multi-exon	FALSE	canonical	0	0	junction_4	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGGTCGCTGCACCTT	8505	False	NA	NA	False	ATTAAA	-23	NA	139800008	139789728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139791497_139791936_139792132_139792659_139792830_139793374_139793467_139793548_139793625_139793711_139793803_139794111_139794278_139798719_139798948_139799807
ES.27600.2	chr5	-	2043	9	NIC	ENSMUSG00000036687.14	novel	2039	9	NA	NA	-69	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.96452920568771	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTTTGTTGGGCTTTCT	8514	False	NA	NA	False	GATAAA	-15	NA	139805741	139790710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139791497_139791936_139792132_139792659_139792830_139793374_139793467_139793548_139793625_139793711_139793803_139794111_139794278_139798719_139798948_139805502
ES.27601.1	chr5	-	857	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	11	15	1	6	multi-exon	FALSE	canonical	3	166	junction_2	27	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTCTCAGTGATCCTG	7324	False	NA	-27	True	AATAAA	-16	NA	139812629	139809361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139809829_139811882_139812120_139812476
ES.27601.2	chr5	-	775	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	-43	1	-1	-1	multi-exon	FALSE	canonical	3	69	junction_2	75.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGGCCTTCTCAGT	7312	False	NA	-34	True	AATAAA	-9	NA	139812641	139809368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139809829_139811882_139812120_139812563
ES.27601.3	chr5	-	2884	2	NIC	ENSMUSG00000029551.14	novel	883	3	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	166	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGGCCTTCTCAGT	7344	False	NA	-34	True	AATAAA	-9	NA	139812609	139809368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139812120_139812476
ES.27602.1	chr5	-	218	1	Intergenic	novelGene_22972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACCGAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	139880990	139880772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139880800_139881000
ES.27603.1	chr5	+	4201	2	FSM	ENSMUSG00000048988.9	ENSMUST00000198608.2	413	2	-113	-3675	-113	3	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGTTCTGTGGGTTT	NA	False	NA	NA	False	AAAAAG	-45	NA	139894115	139960480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_139894569_139956732
ES.27603.2	chr5	+	188	1	Intergenic	novelGene_22974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATGAAG	NA	False	NA	NA	False	NA	NA	NA	139936556	139936744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139936600_139936700
ES.27604.1	chr5	-	170	1	Intergenic	novelGene_22973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAGTTACCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	139928156	139927986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139928000_139928200
ES.27605.1	chr5	-	303	1	Intergenic	novelGene_22975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	139966591	139966288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_139966300_139966600
ES.27606.1	chr5	+	1182	2	Intergenic	novelGene_22976	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	139988281	139989902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_139988435_139988873
ES.27607.1	chr5	+	148	1	Intergenic	novelGene_22978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	140159248	140159396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140159200_140159400
ES.27608.1	chr5	+	3489	1	Intergenic	novelGene_22979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGTCAAGTTTGAGGC	NA	False	NA	NA	False	NA	NA	NA	140163281	140166770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140163300_140166800
ES.27609.1	chr5	+	171	1	Intergenic	novelGene_22981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAACAAACAAGCA	NA	False	NA	NA	False	NA	NA	NA	140251579	140251750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140251600_140251800
ES.2761.1	chr10	+	101	1	Intergenic	novelGene_2103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	50128992	50129093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_50129000_50129100
ES.27610.1	chr5	-	2779	18	FSM	ENSMUSG00000029554.16_ENSMUSG00000105679.2	ENSMUST00000031534.9	2640	18	-134	-5	-134	5	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCCAAGCTACCT	NA	False	NA	6	True	AATAAA	-32	NA	140307441	139994438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.11	chr5	-	881	3	NNC	ENSMUSG00000029554.16	novel	1603	7	NA	NA	48088	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140053133	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140053020
ES.27610.12	chr5	-	2646	18	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	3635	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	51.7729939888973	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140303670	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140303609
ES.27610.13	chr5	-	2744	19	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-22	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	67.1017515548469	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140307329	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140002294_140002386_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.14	chr5	-	2710	19	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	67.3985978166781	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140307296	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_139997149_139997240_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.15	chr5	-	2156	15	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	13926	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.7968253065147	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140293379	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289474_140293345
ES.27610.16	chr5	-	2473	17	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	8013	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.2740091127193	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCGGATTGTGTCCAA	NA	False	NA	-9	True	AATAAA	-17	NA	140299292	139994453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281537_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140299244
ES.27610.17	chr5	-	2623	18	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.3040088574533	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTCCCGGATTGTG	NA	False	NA	-14	True	AATAAA	-12	NA	140307298	139994458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285962_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.18	chr5	-	2556	17	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.2721442020079	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTCCCGGATTGTG	NA	False	NA	-14	True	AATAAA	-12	NA	140307295	139994458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_139995305_139995447_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.19	chr5	-	2753	19	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.3592914033563	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCCTTCCCGGATTGT	NA	False	NA	-15	True	AATAAA	-11	NA	140307295	139994459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_139995305_139995447_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.20	chr5	-	181	1	Intergenic	novelGene_22977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	140106041	140105860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140105900_140106000
ES.27610.21	chr5	-	174	1	Intergenic	novelGene_22980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	140183417	140183243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140183200_140183400
ES.27610.22	chr5	-	3080	9	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-6	285069	-6	-126775	5prime_fragment	FALSE	canonical	3	167	junction_8	18.9864260723286	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGAATGTGTGATG	NA	False	NA	NA	False	NA	NA	NA	140307313	140279512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.23	chr5	-	6499	1	NIC	ENSMUSG00000029554.16	novel	2547	17	NA	NA	21294	-126775	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGAATGTGTGATG	NA	False	NA	NA	False	NA	NA	NA	140286011	140279512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140279500_140286000
ES.27610.24	chr5	-	7331	8	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-12	-126784	intron_retention	FALSE	canonical	3	167	junction_7	20.2514801676221	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	140307319	140279521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140300908_140307261
ES.27610.25	chr5	-	2151	10	NNC	ENSMUSG00000029554.16	novel	2547	17	NA	NA	-18	-126815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.6611017598592	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140307325	140279552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140280641_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.26	chr5	-	2289	6	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	-18	292692	-18	-134398	5prime_fragment	FALSE	canonical	3	167	junction_5	22.0308874083637	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	140307325	140287135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.27	chr5	-	2147	5	NNC	ENSMUSG00000029554.16	novel	2547	17	NA	NA	6396	-134552	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	94.9815771610474	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCAGCCGGGCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	140300909	140287289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140288752_140289253_140289453_140293345_140293526_140296349_140296491_140300744
ES.27610.28	chr5	-	2638	2	ISM	ENSMUSG00000029554.16	ENSMUST00000110829.7	2547	17	16794	292854	16794	-134560	internal_fragment	FALSE	canonical	3	200	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGAGGCAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	140290511	140287297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140288752_140289327
ES.27610.29	chr5	-	2076	6	ISM	ENSMUSG00000029554.16	ENSMUST00000110829.7	2547	17	22	292863	22	-134569	5prime_fragment	FALSE	canonical	3	167	junction_5	22.0308874083637	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	140307283	140287306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.30	chr5	-	1833	1	NIC	ENSMUSG00000029554.16	novel	2547	17	NA	NA	12	-152723	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	140307293	140305460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140305500_140307300
ES.27610.4	chr5	-	2539	17	FSM	ENSMUSG00000029554.16	ENSMUST00000110829.7	2547	17	0	8	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	52.7873090808766	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGGATTGTGTCCAAGG	NA	False	NA	-7	True	AATAAA	-19	NA	140307305	139994451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.6	chr5	-	2505	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	48.426329357076	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGGATTGTGTCCAAGG	NA	False	NA	-7	True	AATAAA	-19	NA	140307321	139994451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.7	chr5	-	2438	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-14	-3	combination_of_known_splicesites	TRUE	canonical	1	3	junction_2	52.3509789784298	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGGATTGTGTCCAAGG	NA	False	NA	-7	True	AATAAA	-19	NA	140307321	139994451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139995030_140051568_140051760_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.8	chr5	-	2676	19	NNC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.0040848446294	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140307310	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140136718_140136761_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27610.9	chr5	-	2573	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	-29	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	53.5087609649112	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCGGATTGTGTCCAAG	NA	False	NA	-8	True	AATAAA	-18	NA	140307336	139994452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ES.27611.1	chr5	-	183	1	FSM	ENSMUSG00000105679.2	ENSMUST00000198617.2	2223	1	1092	948	1092	-948	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAATATTATTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	140308507	140308324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140308300_140308500
ES.27612.1	chr5	-	167	1	Intergenic	novelGene_22982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAGATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140310734	140310567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140310600_140310700
ES.27613.1	chr5	+	902	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	48	2	-1	-2	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	8	True	NA	NA	NA	140317662	140323890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
ES.27613.2	chr5	+	807	4	NIC	ENSMUSG00000036639.13	novel	954	5	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	62.1342632262318	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	8	True	NA	NA	NA	140317662	140323890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140317711_140318177_140318229_140320209_140320375_140323347
ES.27613.3	chr5	+	3077	4	ISM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	11	0	11	0	intron_retention	FALSE	canonical	3	93	junction_1	51.4738336978659	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317674	140323892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067
ES.27613.4	chr5	+	940	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	12	2	12	-2	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	8	True	NA	NA	NA	140317675	140323890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ES.27613.5	chr5	+	698	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	27	229	-18	-33	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCGTCCCCACATAC	NA	False	NA	20	True	NA	NA	NA	140317690	140323663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ES.27613.6	chr5	+	935	4	FSM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	-2	-327	-2	-2	multi-exon	FALSE	canonical	3	152	junction_1	28.5696031162882	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	False	NA	8	True	NA	NA	NA	140318147	140323890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140318229_140320209_140320375_140321067_140321214_140323347
ES.27614.1	chr5	-	1759	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	-316	0	-316	0	multi-exon	FALSE	canonical	3	45	junction_2	12	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	3585	False	NA	-5	True	AAAACA	-37	NA	140317969	140313428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140314536_140316734_140317025_140317607
ES.27614.2	chr5	-	1783	3	NNC	ENSMUSG00000029557.8	novel	1443	3	NA	NA	36	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGGCTTTTGTTTA	3937	False	NA	-16	True	AAAACA	-26	NA	140317617	140313439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140314536_140316734_140317025_140317220
ES.27614.3	chr5	-	2311	3	NNC	ENSMUSG00000029557.8	novel	1443	3	NA	NA	11	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTTTCTGGCTTTT	3912	False	NA	-21	True	AAAACA	-21	NA	140317642	140313444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140314536_140315839_140317025_140317607
ES.27615.1	chr5	-	6742	2	Antisense	novelGene_ENSMUSG00000036639.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAAGAACAGAGTTTAAG	6441	False	NA	NA	False	NA	NA	NA	140325444	140318254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_140319201_140319648
ES.27616.1	chr5	-	2635	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	1	-9	1	5	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACGCTGCAGTTTCTCTC	7721	False	NA	-3	True	AATAAA	-23	NA	140375016	140326048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.12	chr5	-	1569	6	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6820195162972	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTCCACGCTGCAG	7787	False	NA	-11	True	AATAAA	-15	NA	140374950	140326056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327115_140339236_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.14	chr5	-	2635	11	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.5291132193637	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTCCACGCTGCAG	7748	False	NA	-11	True	AATAAA	-15	NA	140374989	140326056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338754_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.15	chr5	-	3374	10	NIC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	173	junction_9	18.6752625710796	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGGTTTCCACGCTGC	7741	False	NA	-13	True	AATAAA	-13	NA	140374996	140326058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.17	chr5	-	1377	11	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	33	-525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0883061099448	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTGGCTGATTCCCTC	7774	False	NA	-1	True	ACTAAA	-19	NA	140374963	140327225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327389_140330053_140330191_140330463_140330611_140332031_140332101_140337893_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.18	chr5	-	1496	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	-39	1170	-39	-527	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCCTGGCTGATTCCC	7681	False	NA	-3	True	ACTAAA	-17	NA	140375056	140327227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.19	chr5	-	1397	11	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	46	-535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.3596085846496	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACAGTGTGTTCCTGGC	7787	False	NA	-11	True	ACTAAA	-9	NA	140374950	140327235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330191_140330448_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.2	chr5	-	2689	11	NIC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	63.6502945790513	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACGCTGCAGTTTCTC	7739	False	NA	-5	True	AATAAA	-21	NA	140374998	140326050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341911_140343811_140343930_140345946_140346138_140374902
ES.27616.20	chr5	-	4618	6	NIC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	0	3572	intron_retention	FALSE	canonical	3	173	junction_5	12.0995867698033	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAGCAAGTT	7741	False	NA	NA	False	NA	NA	NA	140374996	140334938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.21	chr5	-	176	1	Intergenic	novelGene_22983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAATAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	140370851	140370675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140370700_140370900
ES.27616.3	chr5	-	8047	4	NNC	ENSMUSG00000029560.13	novel	2590	10	NA	NA	847	3	intron_retention	TRUE	canonical	0	0	junction_2	104.92219339428	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCACGCTGCAGTTTCTC	2047	False	NA	-5	True	AATAAA	-21	NA	140338422	140326050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330188_140330448_140330611_140332031
ES.27616.4	chr5	-	5345	4	ISM	ENSMUSG00000029560.13	ENSMUST00000197880.5	2590	10	10401	1	3533	-1	3prime_fragment	FALSE	canonical	3	203	junction_1	16.4991582276861	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTCCACGCTGCAGTT	4733	False	NA	-9	True	AATAAA	-17	NA	140335736	140326054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031
ES.27616.5	chr5	-	3322	9	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_3	64.6195597323287	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7736	False	NA	-10	True	AATAAA	-16	NA	140375001	140326055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330191_140330463_140330620_140337887_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.6	chr5	-	5047	11	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.3596085846496	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	7739	False	NA	-10	True	AATAAA	-16	NA	140374998	140326055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140329835_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27616.7	chr5	-	2527	12	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.9236144813842	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTCCACGCTGCAG	7741	False	NA	-11	True	AATAAA	-15	NA	140374996	140326056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330188_140330463_140330611_140332031_140332101_140337887_140338021_140338785_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346040_140346120_140346138_140374902
ES.27616.8	chr5	-	2648	11	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.6474147837218	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTCCACGCTGCAG	7786	False	NA	-11	True	AATAAA	-15	NA	140374951	140326056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330188_140330448_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341911_140343811_140343930_140345946_140346138_140374902
ES.27616.9	chr5	-	2547	10	NNC	ENSMUSG00000029560.13	novel	2627	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.0572931723383	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTTCCACGCTGCAG	7741	False	NA	-11	True	AATAAA	-15	NA	140374996	140326056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140327398_140330040_140330191_140330463_140330620_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ES.27617.1	chr5	+	177	1	Intergenic	novelGene_22984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140380789	140380966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140380800_140381000
ES.27618.1	chr5	+	174	1	Intergenic	novelGene_22985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGAAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	140386803	140386977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140386800_140387000
ES.27619.1	chr5	+	178	1	Intergenic	novelGene_22986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAAGGGCCGAGC	3058	False	NA	NA	False	NA	NA	NA	140391312	140391490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140391300_140391500
ES.2762.1	chr10	-	169	1	Intergenic	novelGene_2104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAGAAAGGATAGT	NA	False	NA	NA	False	NA	NA	NA	50462466	50462297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_50462300_50462500
ES.27620.1	chr5	+	3036	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-79	-12	-79	12	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTGTAGCTCAGAG	NA	False	NA	27	True	AATAAA	-28	NA	140405003	140429127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.13	chr5	+	2962	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	750.29605062285	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405059	140429115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416022_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.15	chr5	+	2893	20	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	737.289150102404	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405060	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405269_140405343_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.17	chr5	+	3056	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	2	intron_retention	FALSE	canonical	3	2428	junction_3	319.103664643525	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCCTGATCTCTTTG	NA	False	NA	17	True	AATAAA	-18	NA	140405060	140429117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140428192_140428628
ES.27620.18	chr5	+	2958	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	752.285056049604	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405060	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413174_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.19	chr5	+	4853	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	-3	intron_retention	FALSE	non_canonical	0	0	junction_13	726.513435268955	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGCTGTCCTGATCT	NA	False	NA	12	True	AATAAA	-13	NA	140405060	140429112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424480_140424545_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074
ES.27620.21	chr5	+	2969	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	757.45003502248	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAATGCTGTCCTGATC	NA	False	NA	11	True	AATAAA	-12	NA	140405060	140429111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416719_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.24	chr5	+	2558	7	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	659	intron_retention	FALSE	canonical	3	2428	junction_3	314.126655277064	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140405060	140417087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412901_140413164_140413323_140415806_140415939_140416016
ES.27620.25	chr5	+	3048	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	3	intron_retention	FALSE	canonical	3	2428	junction_3	311.855558349304	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	140405060	140429118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.26	chr5	+	4425	16	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	0	intron_retention	FALSE	canonical	3	2428	junction_3	222.604182849789	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405060	140429115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140426867_140427491_140427570_140427878
ES.27620.27	chr5	+	3022	21	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-22	83464	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	950.407926892448	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGCCACAGAGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	140405060	140512579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628_140429115_140434384_140434420_140512558
ES.27620.28	chr5	+	2958	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	756.276771794266	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405062	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428080_140428192_140428628
ES.27620.34	chr5	+	2900	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	750.29605062285	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405069	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415882_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.35	chr5	+	2818	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	772.444634134233	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405069	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.36	chr5	+	2950	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	757.296572529833	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGCTGTCCTGATCTC	NA	False	NA	13	True	AATAAA	-14	NA	140405069	140429113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426861_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.4	chr5	+	3872	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-27	1	intron_retention	FALSE	non_canonical	0	0	junction_2	777.463451671602	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405055	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411201_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.40	chr5	+	4484	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-11	0	intron_retention	TRUE	non_canonical	0	0	junction_13	772.444634134233	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405071	140429115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424436_140425359_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.41	chr5	+	3891	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-11	1	intron_retention	FALSE	canonical	3	2428	junction_3	316.216703322591	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405071	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.42	chr5	+	2829	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	774.750831694341	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405073	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.43	chr5	+	2961	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	755.480513021716	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405073	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427870_140427988_140428074_140428192_140428628
ES.27620.45	chr5	+	3862	18	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-9	0	intron_retention	FALSE	canonical	3	2428	junction_3	318.97824550785	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405073	140429115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.46	chr5	+	2899	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	776.518585860539	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCTGATCTCTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	140405073	140429118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423209_140425692_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.49	chr5	+	2948	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	755.480513021716	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405074	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427884_140427988_140428074_140428192_140428628
ES.27620.5	chr5	+	2987	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	756.743021110866	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405057	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424052_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.50	chr5	+	2944	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	756.13551270936	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405074	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418880_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.51	chr5	+	2546	8	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	-7	11849	-7	838	intron_retention	FALSE	canonical	3	2428	junction_3	291.058588673855	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTATAGCTTTGGCTG	NA	False	NA	NA	False	NA	NA	NA	140405075	140417266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016
ES.27620.56	chr5	+	3973	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	6	-1	intron_retention	TRUE	non_canonical	0	0	junction_10	972.033512173797	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405088	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418894_140422002_140422076_140423039_140423163_140424070_140424432_140425355_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074
ES.27620.57	chr5	+	2608	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.588935660959	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGCTGTCCTGATCT	NA	False	NA	12	True	AATAAA	-13	NA	140405089	140429112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405255_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.58	chr5	+	2691	16	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	819.220480429753	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405089	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.59	chr5	+	2964	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	756.276771794266	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405089	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428047_140428192_140428628
ES.27620.6	chr5	+	5328	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-25	-1	intron_retention	TRUE	non_canonical	0	0	junction_12	776.518585860539	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405057	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140424531_140424597_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.60	chr5	+	6184	17	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	795.258878349528	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGCTGTCCTGATCTC	NA	False	NA	13	True	AATAAA	-14	NA	140405089	140429113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140424798_140424909_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.61	chr5	+	4391	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	755.312370994794	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140405089	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424480_140424545_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.62	chr5	+	2880	20	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	737.289150102404	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGTGAGAATGCTG	NA	False	NA	3	True	AATAAA	-4	NA	140405089	140429103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628_140429003_140429048
ES.27620.63	chr5	+	2928	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	757.296572529833	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405089	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427500_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.64	chr5	+	2912	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	757.45003502248	2389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405090	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416749_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.65	chr5	+	3372	18	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	9	1	9	-1	intron_retention	FALSE	canonical	3	2428	junction_3	217.816452363946	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405091	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074
ES.27620.69	chr5	+	2713	17	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-1787	-1	intron_retention	FALSE	canonical	3	2428	junction_2	311.621941421011	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140411057	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427988_140428074_140428192_140428628
ES.27620.7	chr5	+	2982	19	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	753.235703277107	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405058	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425821_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.71	chr5	+	4311	2	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-303	688	intron_retention	FALSE	canonical	3	3220	junction_1	0	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTTACTGGATCCCCA	NA	False	NA	NA	False	NA	NA	NA	140412541	140417116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140412901_140413164
ES.27620.72	chr5	+	4333	14	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	29	1	intron_retention	TRUE	non_canonical	0	0	junction_8	874.132144425063	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140412873	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140424505_140424571_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.73	chr5	+	1688	12	NIC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	3016	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	944.515967690933	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCCTGATCTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	140415860	140429116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140415939_140416016_140416084_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.74	chr5	+	3694	8	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-3698	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	1150.4885741213	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	2573	False	NA	14	True	AATAAA	-15	NA	140421998	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140422076_140423039_140424480_140424545_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.75	chr5	+	1334	9	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	16916	1	-3698	-1	3prime_fragment	FALSE	canonical	3	2626	junction_6	361.697646522617	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	2573	False	NA	14	True	AATAAA	-15	NA	140421998	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27620.76	chr5	+	158	1	Intergenic	novelGene_22989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	140451424	140451582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140451400_140451600
ES.27620.77	chr5	+	1808	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	36	487	11	-487	multi-exon	FALSE	canonical	3	68	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCATTCCTGTGGTT	NA	False	NA	18	True	AGTAAA	-14	NA	140491340	140510992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140491452_140509295
ES.27620.78	chr5	+	1805	2	FSM	ENSMUSG00000036599.11	ENSMUST00000124142.2	766	2	46	-1085	46	-486	multi-exon	FALSE	canonical	3	9	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCATTCCTGTGGTTC	NA	False	NA	19	True	AGTAAA	-15	NA	140491375	140510993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140491483_140509295
ES.27620.9	chr5	+	5061	18	NNC	ENSMUSG00000056076.14	novel	2945	19	NA	NA	-23	-1	intron_retention	TRUE	non_canonical	0	0	junction_12	777.123994239108	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	False	NA	14	True	AATAAA	-15	NA	140405059	140429114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424480_140424545_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ES.27621.1	chr5	-	2358	1	Intergenic	novelGene_22987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGAGCACTCCACCAA	NA	False	NA	NA	False	NA	NA	NA	140421415	140419057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140419100_140421400
ES.27622.1	chr5	-	88	1	Intergenic	novelGene_22988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATTGAAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	140439456	140439368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140439400_140439500
ES.27623.1	chr5	-	186	1	Intergenic	novelGene_22990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAATAGAATGGTCT	NA	False	NA	NA	False	NA	NA	NA	140453967	140453781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140453800_140454000
ES.27624.1	chr5	-	180	1	Intergenic	novelGene_22991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TATAAAAAAAAAAAAAAAGG	6794	False	NA	NA	False	NA	NA	NA	140558272	140558092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140558100_140558300
ES.27625.1	chr5	+	2281	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	27	-3	27	3	multi-exon	FALSE	canonical	2	6	junction_3	5.13888735674427	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCCCTAGTCTTGCTT	NA	False	NA	10	True	AATAAA	-21	NA	140593101	140601303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ES.27626.1	chr5	-	4786	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-71	-57	-71	57	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCATCATGAACACTGTA	1205	False	NA	NA	False	NA	NA	NA	140634857	140606275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.10	chr5	-	4499	15	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3703972249236	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTCTCTCTCTCTCT	1251	False	NA	NA	False	AATAAA	-11	NA	140634811	140606337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140608893_140609071_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.11	chr5	-	4603	13	FSM	ENSMUSG00000036565.8	ENSMUST00000197452.5	4576	13	-35	8	-29	-8	multi-exon	FALSE	canonical	0	0	junction_1	22.9254528611517	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	1247	False	NA	NA	False	AATAAA	-8	NA	140634815	140606340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140609287_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.12	chr5	-	4762	15	NIC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-11	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	27.6085057878317	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	1265	False	NA	NA	False	AATAAA	-8	NA	140634797	140606340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140609287_140610845_140610947_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.13	chr5	-	4626	13	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.7568852910082	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	1248	False	NA	NA	False	AATAAA	-8	NA	140634814	140606340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609287_140612876_140613051_140615136_140615274_140615469_140615587_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.14	chr5	-	3121	2	NNC	ENSMUSG00000036565.8	novel	791	4	NA	NA	-22	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	1254	False	NA	NA	False	AATAAA	-8	NA	140634808	140606340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609128_140634474
ES.27626.16	chr5	-	4594	15	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-59	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.3703972249236	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	1217	False	NA	NA	False	AATAAA	-8	NA	140634845	140606340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140608751_140608865_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.17	chr5	-	4621	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-23	60	-23	-60	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGGTCTCTATTCAG	1253	False	NA	NA	False	ACTAAA	-17	NA	140634809	140606392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.18	chr5	-	2855	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	188	1615	154	891	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTAGTGTGTGAT	1464	False	NA	NA	False	NA	NA	NA	140634598	140607947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.19	chr5	-	2169	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	-4	2493	-4	13	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCACAGCTACAGCGAGC	1272	False	NA	NA	False	NA	NA	NA	140634790	140608825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.2	chr5	-	4966	15	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-4	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	27.4710422675461	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTCTC	1272	False	NA	NA	False	AATAAA	-18	NA	140634790	140606330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140624041_140624344_140634459
ES.27626.3	chr5	-	4658	14	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.8999878414492	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCTCTCTCTCTCTC	1263	False	NA	NA	False	AATAAA	-16	NA	140634799	140606332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620526_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.5	chr5	-	4685	14	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-4	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	22.1065199624923	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTCTCTCTCTCTCT	1272	False	NA	NA	False	AATAAA	-15	NA	140634790	140606333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615587_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.7	chr5	-	4619	13	NIC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8159927833278	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTCTCTCTCTCTCT	1258	False	NA	NA	False	AATAAA	-15	NA	140634804	140606333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ES.27626.9	chr5	-	4606	13	NNC	ENSMUSG00000036565.8	novel	4658	14	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.0149407994025	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTCTCTCTCTCTCTCT	1252	False	NA	NA	False	AATAAA	-13	NA	140634810	140606335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621197_140621651_140621822_140634459
ES.27627.1	chr5	+	3249	1	Antisense	novelGene_ENSMUSG00000036555.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140677624	140680873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_140677600_140680900
ES.27628.1	chr5	-	5154	23	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	9	13	intron_retention	FALSE	canonical	2	3	junction_3	8.61384624354521	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTCCGTCCTGTGTT	4504	False	NA	NA	False	AGTAAA	-31	NA	140688040	140649246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.10	chr5	-	2441	21	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	96	8272	-6	-3941	5prime_fragment	FALSE	canonical	3	15	junction_8	7.13161973187017	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGATCTAGCTTATTGA	4507	False	NA	NA	False	ATTAAA	-14	NA	140688037	140655853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.11	chr5	-	5593	18	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	8	-3943	intron_retention	FALSE	canonical	3	16	junction_2	7.09598063529422	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAAGATCTAGCTTATT	4503	False	NA	NA	False	ATTAAA	-12	NA	140688041	140655855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.12	chr5	-	2581	14	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	66	17677	-12	3526	5prime_fragment	FALSE	canonical	3	15	junction_1	7.43572059913512	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTAGGCAACGCCTGCA	4477	False	NA	NA	False	AATAAA	-16	NA	140688067	140665258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.13	chr5	-	2987	9	ISM	ENSMUSG00000036555.15	ENSMUST00000136385.8	6924	19	-37	20256	-2	49	5prime_fragment	FALSE	canonical	0	0	junction_2	11.3955857681823	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGGAGTTAGACTAATTT	4487	False	NA	NA	False	AATAAA	-21	NA	140688057	140669515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140671850_140672082_140672156_140675567_140675619_140675710_140675825_140677354_140677426_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.14	chr5	-	3177	11	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	92	21934	8	49	5prime_fragment	FALSE	canonical	3	19	junction_4	6.58862656401165	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGGAGTTAGACTAATTT	4503	False	NA	NA	False	AATAAA	-21	NA	140688041	140669515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.15	chr5	-	178	1	Intergenic	novelGene_22992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140681172	140680994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140681000_140681200
ES.27628.2	chr5	-	3976	19	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	8.42981188372918	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4465	False	NA	NA	False	AGTAAA	-18	NA	140688079	140649259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140675567_140675619_140675710_140675825_140677354_140677426_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.3	chr5	-	4206	22	NNC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.79610732999908	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4427	False	NA	NA	False	AGTAAA	-18	NA	140688117	140649259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657219_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.4	chr5	-	4394	23	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	92	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	8.85045640136127	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4616	False	NA	NA	False	AGTAAA	-18	NA	140687928	140649259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687696
ES.27628.5	chr5	-	4294	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	62	1681	-16	-3	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTCTGCCTTTGGCAG	4473	False	NA	NA	False	AGTAAA	-15	NA	140688071	140649262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.6	chr5	-	4862	23	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	2	-6	intron_retention	FALSE	canonical	2	3	junction_2	8.66407038882299	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGCCTCTGCCTTTGG	4515	False	NA	NA	False	ATTAAA	-44	NA	140688029	140649265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.7	chr5	-	4336	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	0	-20	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGGGTGAAGCCTGAA	4513	False	NA	NA	False	ATTAAA	-30	NA	140688031	140649279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27628.9	chr5	-	2618	24	NIC	ENSMUSG00000036555.15	novel	6037	23	NA	NA	3	22	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	8.47948709081224	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGTGTCGTGCCTTTG	4498	False	NA	NA	False	NA	NA	NA	140688046	140651012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140651249_140651762_140651964_140654776_140654876_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ES.27629.1	chr5	+	3529	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	-196	0	-196	0	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690569	140705134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.11	chr5	+	3197	13	FSM	ENSMUSG00000000148.18	ENSMUST00000153440.8	3023	13	2	-176	2	19	multi-exon	FALSE	canonical	3	6	junction_6	25.4114748795806	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690779	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.12	chr5	+	5535	11	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_8	29.8370574956714	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690779	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702703_140702783_140702898_140703075_140703656
ES.27629.13	chr5	+	2800	10	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	37.4198732437758	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690779	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700380_140702914_140703075_140703656
ES.27629.14	chr5	+	3325	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	27.0587788858422	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAAGTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	140690779	140705123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703092_140703656
ES.27629.15	chr5	+	4492	13	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	-4	6	intron_retention	FALSE	canonical	2	11	junction_4	24.7132162122933	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGGTCCTGTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	140690800	140705091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690831_140691707_140691852_140695892_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.16	chr5	+	3117	13	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	28.1349673696077	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690805	140705134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140703656
ES.27629.17	chr5	+	3445	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	-14	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.18	chr5	+	3469	14	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	31.3678311077187	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.19	chr5	+	4248	9	NNC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_4	45.4058090997176	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698288_140698928_140700321_140700702_140700893_140700968_140702446_140702550_140702703
ES.27629.2	chr5	+	4106	13	FSM	ENSMUSG00000000148.18	ENSMUST00000110806.8	3854	13	-206	-46	-194	-3	multi-exon	FALSE	canonical	3	71	junction_1	11.0412735779086	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690571	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898
ES.27629.20	chr5	+	3300	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.6735155877117	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690806	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697263_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703092_140703656
ES.27629.21	chr5	+	3396	15	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5197170121024	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690806	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695658_140695766_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.22	chr5	+	2360	3	ISM	ENSMUSG00000000148.18	ENSMUST00000124892.2	3179	7	3	3327	3	-3327	5prime_fragment	FALSE	canonical	3	71	junction_1	5.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAAAGAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	140690809	140698087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140690831_140691707_140691852_140695892
ES.27629.23	chr5	+	3282	13	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	3	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	34.6853915775632	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTAAAGTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	140690809	140705122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690984_140691707_140691852_140695892_140696048_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.24	chr5	+	4272	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	-4	-837	-4	837	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGTCATGGTCCATGT	NA	False	NA	NA	False	NA	NA	NA	140690816	140705971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.26	chr5	+	4555	11	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	17	19	intron_retention	FALSE	canonical	0	0	junction_10	37.8	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690837	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690984_140691707_140691852_140695892_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702783_140703656
ES.27629.27	chr5	+	4242	11	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	18	3	18	-3	intron_retention	FALSE	canonical	2	10	junction_1	27.4708936876833	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690838	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446
ES.27629.28	chr5	+	3421	13	NIC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	138	19	intron_retention	FALSE	canonical	2	10	junction_1	32.4640827171609	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690958	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702783_140702898_140703075_140703656
ES.27629.29	chr5	+	3121	12	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	5069	19	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	25.6318500217442	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140695889	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.3	chr5	+	3363	14	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	24.0315374643282	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690756	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.30	chr5	+	2745	11	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	6460	204	6460	2	3prime_fragment	FALSE	canonical	3	82	junction_9	8.65390085452797	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGTAGTACTGATGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	140697280	140704930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.31	chr5	+	2446	9	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	7986	3	7986	-3	3prime_fragment	FALSE	canonical	3	82	junction_7	9.32654142756038	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140698806	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.32	chr5	+	2092	6	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	9689	30	9689	19	3prime_fragment	FALSE	canonical	3	82	junction_4	8.5463442476886	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140700509	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.5	chr5	+	4162	11	ISM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	0	3	0	-3	intron_retention	FALSE	canonical	3	71	junction_1	11.4821600755259	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690765	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446
ES.27629.6	chr5	+	3276	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.8374462404689	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690765	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700541_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.27629.7	chr5	+	3291	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.3767549797803	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	140690765	140705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698288_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703092_140703656
ES.27629.8	chr5	+	3295	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	27.0587788858422	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTAAAGTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	140690767	140705122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703680
ES.27629.9	chr5	+	3469	15	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.5197170121024	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140690773	140705131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140690831_140691707_140691852_140695618_140695766_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ES.2763.1	chr10	+	7485	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	-5	280	-5	-280	multi-exon	FALSE	canonical	3	60	junction_25	18.281297269701	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTACTCTTTTTTTCTCC	NA	False	NA	20	True	AATAAA	-25	NA	50468759	50727301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.10	chr10	+	6870	41	NIC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	47	-283	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	23.6888159265084	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50468811	50727298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_50468994_50480846_50480979_50484015_50484167_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.11	chr10	+	7405	42	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	61	-283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	23.443224414949	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50468825	50727298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626559_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.14	chr10	+	7454	43	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	83	-284	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	30.4691956258476	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50468847	50727297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50480846_50480979_50484015_50484167_50489846_50489913_50493807_50494363_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.15	chr10	+	7075	40	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	3182	-283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0592029317481	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50484049	50727298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521036_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643195_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.16	chr10	+	7005	40	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	3238	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	23.4358413285532	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50484105	50727297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590530_50592591_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.17	chr10	+	6885	40	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	13087	-284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	33.6016420499797	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50493954	50727297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50494368_50511128_50511198_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630215_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721840_50725566_50725743_50726556
ES.2763.18	chr10	+	156	1	ISM	ENSMUSG00000038774.10	ENSMUST00000219226.2	1357	2	14008	22	13987	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	50494854	50495010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_50494900_50495000
ES.2763.19	chr10	+	5843	35	NIC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	2505	-287	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	25.5560311207276	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACAAGCTACTCTTTT	NA	False	NA	13	True	AATAAA	-18	NA	50521042	50727294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.2	chr10	+	7560	43	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	7	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9463332437541	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50468771	50727297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50472132_50472224_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.20	chr10	+	5786	30	NNC	ENSMUSG00000038774.10	novel	529	3	NA	NA	29815	-281	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.7895996144931	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTACTCTTTTTTTCTC	NA	False	NA	19	True	AATAAA	-24	NA	50554965	50727300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50555698_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.21	chr10	+	5862	30	NNC	ENSMUSG00000038774.10	novel	529	3	NA	NA	30020	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.7895996144931	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTCCTGTCTTAGACG	NA	False	NA	NA	False	TATAAA	-21	NA	50555170	50727581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50555698_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.22	chr10	+	5267	24	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	97523	25905	-38766	-16664	internal_fragment	FALSE	canonical	3	60	junction_12	22.2446442227641	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGTTTGATTGGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	50566287	50701676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731
ES.2763.23	chr10	+	4498	26	NIC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	-28526	-285	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	28.0235900626597	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAGCTACTCTTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	50576527	50727296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.4	chr10	+	8335	4	ISM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	15	225936	15	6613	5prime_fragment	FALSE	canonical	3	92	junction_3	4.71404520791032	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAATCCAAAACCATTGT	NA	False	NA	NA	False	AATAAA	-27	NA	50468779	50501645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807
ES.2763.5	chr10	+	7254	42	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	25	-475	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	23.2247893162981	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGTTGATCTTATTAG	NA	False	NA	NA	False	AATATA	-17	NA	50468789	50727106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536756_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.6	chr10	+	7732	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	27	1	27	-1	multi-exon	FALSE	canonical	3	60	junction_25	18.281297269701	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGTCCTGTCTTAGAC	NA	False	NA	NA	False	TATAAA	-20	NA	50468791	50727580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.7	chr10	+	7285	41	NIC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	27	-283	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	23.2424046733551	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50468791	50727298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.8	chr10	+	7357	42	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	27	-284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	22.0755287785068	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTACTCTTTTTTT	NA	False	NA	16	True	AATAAA	-21	NA	50468791	50727297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604277_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.2763.9	chr10	+	7431	42	NNC	ENSMUSG00000038774.10	novel	7760	42	NA	NA	40	-283	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	23.2247893162981	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCTACTCTTTTTTTC	NA	False	NA	17	True	AATAAA	-22	NA	50468804	50727298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536756_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ES.27630.1	chr5	-	166	1	Intergenic	novelGene_22993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATCTTAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	140720491	140720325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140720300_140720500
ES.27631.1	chr5	+	2619	7	FSM	ENSMUSG00000050022.17	ENSMUST00000120630.3	4037	7	36	1382	-5	-1	multi-exon	FALSE	canonical	0	0	junction_3	4.16333199893227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGTGTCATGTATTG	NA	False	NA	22	True	NA	NA	NA	140721316	140739064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_140721394_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
ES.27631.2	chr5	+	2714	7	NIC	ENSMUSG00000050022.17	novel	4037	7	NA	NA	62	-22	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.30761599444003	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGCTGTGTTCTACCT	NA	False	NA	1	True	NA	NA	NA	140721383	140739043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140721577_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
ES.27631.3	chr5	+	4395	7	NNC	ENSMUSG00000050022.17	novel	2402	4	NA	NA	1607	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.21966296705739	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTTCATCAACTA	NA	False	NA	NA	False	NA	NA	NA	140722928	140740445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140723401_140726819_140727343_140729771_140729940_140733897_140734027_140734369_140734543_140734909_140735087_140737692
ES.27631.4	chr5	+	2137	2	NNC	ENSMUSG00000050022.17	novel	2402	4	NA	NA	-12	-1723	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGCATGAAATGAGGATG	NA	False	NA	NA	False	NA	NA	NA	140735025	140737342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_140736598_140736777
ES.27631.5	chr5	+	1374	1	NIC	ENSMUSG00000050022.17	novel	2683	8	NA	NA	2654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGTGTCATGTATTGT	2130	False	NA	23	True	NA	NA	NA	140737691	140739065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_140737700_140739100
ES.27632.1	chr5	-	3545	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	-126	-3	-126	3	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGCCTAGCATGTT	NA	False	NA	NA	False	AATAAA	-30	NA	140816312	140744159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
ES.27632.10	chr5	-	178	1	Intergenic	novelGene_22994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGTTGTCTTCA	1701	False	NA	NA	False	NA	NA	NA	140758842	140758664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140758700_140758800
ES.27632.11	chr5	-	870	2	ISM	ENSMUSG00000000149.11	ENSMUST00000198447.2	1306	3	-280	24994	-6	-24994	5prime_fragment	FALSE	canonical	3	266	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGGCTGTCTCATTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	140816192	140770941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140771368_140815748
ES.27632.12	chr5	-	4663	1	Intergenic	novelGene_22995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACAAGGATGCATCTCAA	NA	False	NA	NA	False	NA	NA	NA	140797462	140792799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_140792800_140797500
ES.27632.2	chr5	-	2976	2	NNC	ENSMUSG00000000149.11	novel	1306	3	NA	NA	-10	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTGCTTCATGCCTAG	NA	False	NA	NA	False	AATAAA	-24	NA	140816196	140744165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140746742_140815796
ES.27632.3	chr5	-	3442	5	NNC	ENSMUSG00000000149.11	novel	3416	4	NA	NA	33	-8	intron_retention	FALSE	canonical	0	0	junction_2	118.99028321674	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGTCTGCTTCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140816153	140744170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140746874_140748344_140748396_140755888_140755956_140771151_140771368_140815748
ES.27632.4	chr5	-	3199	3	NIC	ENSMUSG00000000149.11	novel	3416	4	NA	NA	-7	-8	intron_retention	FALSE	canonical	0	0	junction_2	100.5	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGTCTGCTTCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140816193	140744170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_140746874_140748344_140748396_140815748
ES.27632.5	chr5	-	3555	5	NNC	ENSMUSG00000000149.11	novel	3416	4	NA	NA	-11	-8	intron_retention	FALSE	canonical	0	0	junction_2	118.99028321674	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGTCTGCTTCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140816197	140744170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140746874_140748344_140748396_140761580_140761717_140771151_140771368_140815748
ES.27632.6	chr5	-	3444	5	NNC	ENSMUSG00000000149.11	novel	3416	4	NA	NA	3	-8	intron_retention	FALSE	canonical	0	0	junction_2	118.99028321674	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGTCTGCTTCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140816183	140744170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140746874_140748344_140748396_140749753_140749793_140771151_140771368_140815748
ES.27632.7	chr5	-	3422	5	NNC	ENSMUSG00000000149.11	novel	3416	4	NA	NA	-7	-43	intron_retention	FALSE	canonical	0	0	junction_1	127.23993083934	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAAATAAATGT	NA	False	NA	93	True	NA	NA	NA	140816193	140744205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_140746874_140747112_140747155_140748344_140748396_140771151_140771368_140815748
ES.27632.8	chr5	-	2383	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	56	977	56	808	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTGTACATTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	140816130	140745139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
ES.27632.9	chr5	-	1126	3	ISM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	44867	1804	44593	-19	3prime_fragment	FALSE	canonical	3	201	junction_1	21.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGCGTGCTCTCATTA	2382	False	NA	NA	False	NA	NA	NA	140771319	140745966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140746874_140748344_140748396_140771151
ES.27633.1	chr5	-	3025	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	6	-1732	6	1730	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTCTGAGCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	140867954	140857014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
ES.27633.3	chr5	-	1500	8	ISM	ENSMUSG00000036526.9	ENSMUST00000085786.7	4107	25	116833	10	-1544	-8	3prime_fragment	FALSE	canonical	1	1	junction_7	4.9856938190329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGCAGAGGTTCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	140869504	140858754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756_140867853_140868039_140868137_140869284
ES.27634.1	chr5	+	190	1	Intergenic	novelGene_22996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTACTTTTGAGGTCTC	NA	False	NA	NA	False	NA	NA	NA	140946779	140946969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_140946800_140947000
ES.27635.1	chr5	-	192	1	Intergenic	novelGene_22997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTCTGTGACTCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	141059130	141058938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_141058900_141059100
ES.27636.1	chr5	+	177	1	Intergenic	novelGene_22998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATTATAAAACC	NA	False	NA	NA	False	NA	NA	NA	141378384	141378561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_141378400_141378600
ES.27637.1	chr5	+	2192	14	ISM	ENSMUSG00000039683.17	ENSMUST00000074546.7	7063	41	275083	888	275083	-888	3prime_fragment	TRUE	canonical	0	0	junction_1	0.821313711694716	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACTGGTGAAAACTAGG	NA	False	NA	NA	False	TTTAAA	-33	NA	142117624	142198061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142117850_142129526_142129663_142130724_142130785_142132014_142132117_142144285_142144402_142147529_142147717_142150205_142150344_142158196_142158359_142159424_142159551_142170911_142171077_142173771_142173910_142177631_142177753_142183499_142183630_142197675
ES.27638.1	chr5	+	199	1	Intergenic	novelGene_22999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAGAGACAAAATAGATGG	NA	False	NA	NA	False	NA	NA	NA	142237628	142237827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142237600_142237800
ES.27639.1	chr5	+	173	1	Intergenic	novelGene_23000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	142282802	142282975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142282800_142283000
ES.2764.1	chr10	+	200	1	Intergenic	novelGene_2105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTTAATCGGCTAGTG	801	False	NA	NA	False	NA	NA	NA	50903895	50904095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_50903900_50904100
ES.27640.1	chr5	+	2431	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	-41	5049	-38	-5049	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGGGGTTCTGTGT	NA	False	NA	NA	False	CATAAA	-24	NA	142387213	142442717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ES.27640.10	chr5	+	4539	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	11	2	intron_retention	FALSE	canonical	3	63	junction_7	13.3769906014402	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8656	False	NA	16	True	AATAAA	-21	NA	142449764	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.11	chr5	+	4918	13	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	63	junction_7	14.4055834082946	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8668	False	NA	14	True	AATAAA	-19	NA	142449776	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462867_142462970
ES.27640.12	chr5	+	3890	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-20	3	intron_retention	FALSE	canonical	3	53	junction_8	14.9427478826926	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8670	False	NA	17	True	AATAAA	-22	NA	142449778	142463560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.13	chr5	+	3115	16	NNC	ENSMUSG00000039623.14	novel	2965	17	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_11	32.2549565527877	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8675	False	NA	14	True	AATAAA	-19	NA	142449783	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460742_142461457_142461556_142462448_142462579_142462651_142462867_142462970
ES.27640.14	chr5	+	3694	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-15	-5	intron_retention	FALSE	canonical	3	53	junction_8	15.27816161134	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGAGCAGTGGTGGCA	8675	False	NA	9	True	AATAAA	-14	NA	142449783	142463552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142462582_142462651_142462867_142462970
ES.27640.15	chr5	+	3835	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-15	3	intron_retention	FALSE	canonical	2	2	junction_2	24.5405786402847	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8675	False	NA	7	True	AATAAA	-17	NA	142449783	142464468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452230_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.16	chr5	+	5012	12	NIC	ENSMUSG00000039623.14	novel	4594	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	63	junction_7	14.311181549941	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8678	False	NA	14	True	AATAAA	-19	NA	142449786	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448
ES.27640.17	chr5	+	3162	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-11	0	intron_retention	FALSE	canonical	3	53	junction_8	14.5134420452214	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8679	False	NA	14	True	AATAAA	-19	NA	142449787	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.18	chr5	+	3718	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-20	-9	-10	9	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGTGTCTTCTGGGTCCA	8680	False	NA	13	True	AATAAA	-23	NA	142449788	142464474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.19	chr5	+	3034	15	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_2	31.4578597297323	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8680	False	NA	14	True	AATAAA	-19	NA	142449788	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452230_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460584_142460742_142461457_142461556_142462448
ES.27640.2	chr5	+	7466	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	-23	-4	-20	4	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTATGAGTGGTCC	NA	False	NA	16	True	AATAAA	-23	NA	142387231	142447770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ES.27640.20	chr5	+	3781	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-10	6	intron_retention	FALSE	canonical	3	63	junction_7	13.0632648633061	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8680	False	NA	10	True	AATAAA	-20	NA	142449788	142464471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.21	chr5	+	3118	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-3	1	intron_retention	FALSE	canonical	3	53	junction_8	15.4324333790883	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	8687	False	NA	15	True	AATAAA	-20	NA	142449795	142463558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.22	chr5	+	4071	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	4	intron_retention	FALSE	canonical	1	2	junction_11	25.3184166610438	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCGCGGTGTCTTCTGG	8690	False	NA	8	True	AATAAA	-18	NA	142449798	142464469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460584_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.23	chr5	+	3815	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	6	intron_retention	FALSE	canonical	1	2	junction_11	24.3474844696531	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8691	False	NA	10	True	AATAAA	-20	NA	142449799	142464471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460584_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.24	chr5	+	3653	17	FSM	ENSMUSG00000039623.14	ENSMUST00000196055.2	2965	17	-29	-659	1	3	multi-exon	FALSE	canonical	0	0	junction_11	25.1941678519057	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8691	False	NA	7	True	AATAAA	-17	NA	142449799	142464468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.25	chr5	+	2860	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	4	intron_retention	FALSE	canonical	3	63	junction_7	13.0632648633061	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGCACATGCCTTT	8691	False	NA	18	True	AATAAA	-23	NA	142449799	142463561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.26	chr5	+	4023	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	53	junction_8	15.4324333790883	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCGCGGTGTCTTCT	8691	False	NA	6	True	AATAAA	-16	NA	142449799	142464467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.27	chr5	+	4827	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	2	3	intron_retention	FALSE	canonical	3	63	junction_7	13.8764625541869	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8692	False	NA	17	True	AATAAA	-22	NA	142449800	142463560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.28	chr5	+	3473	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	5	4	intron_retention	FALSE	canonical	3	53	junction_8	15.0056111953808	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGCACATGCCTTT	8695	False	NA	18	True	AATAAA	-23	NA	142449803	142463561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.3	chr5	+	2204	8	ISM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	0	6133	0	-6133	5prime_fragment	FALSE	canonical	3	17	junction_3	5.96246764420263	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGCAATGGAAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	142387254	142441633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107
ES.27640.30	chr5	+	2945	18	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	34.8946015594544	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8698	False	NA	16	True	AATAAA	-21	NA	142449806	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460584_142460742_142461131_142461247_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.32	chr5	+	2841	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	1	intron_retention	FALSE	canonical	2	2	junction_8	24.1712409463993	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	8700	False	NA	15	True	AATAAA	-20	NA	142449808	142463558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456193_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.33	chr5	+	3794	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	6	intron_retention	FALSE	canonical	0	0	junction_4	25.0009777586575	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCGGTGTCTTCTGGGT	8700	False	NA	10	True	AATAAA	-20	NA	142449808	142464471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453780_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.34	chr5	+	4051	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	53	junction_8	14.5134420452214	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCGCGGTGTCTTCT	8700	False	NA	6	True	AATAAA	-16	NA	142449808	142464467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.35	chr5	+	3097	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	intron_retention	FALSE	canonical	2	2	junction_8	24.3474844696531	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8701	False	NA	16	True	AATAAA	-21	NA	142449809	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456193_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.36	chr5	+	3704	17	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	24.4843700143581	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCGCGGTGTCTTCT	8701	False	NA	6	True	AATAAA	-16	NA	142449809	142464467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452230_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.37	chr5	+	4592	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	-4	intron_retention	FALSE	canonical	3	63	junction_7	13.2526652449488	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGCAGTGGTGGCAC	8701	False	NA	10	True	AATAAA	-15	NA	142449809	142463553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.39	chr5	+	5402	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	63	junction_7	13.3769906014402	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCGCGGTGTCTTCT	8701	False	NA	6	True	AATAAA	-16	NA	142449809	142464467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.4	chr5	+	4662	23	Fusion	ENSMUSG00000056493.10_ENSMUSG00000039623.14	novel	7439	9	NA	NA	11	1	intron_retention	FALSE	canonical	0	0	junction_8	31.6883063657649	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	NA	False	NA	15	True	AATAAA	-20	NA	142387265	142463558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462867_142462970
ES.27640.40	chr5	+	4842	15	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	5	intron_retention	TRUE	canonical	0	0	junction_11	26.7117072858035	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCACATGCCTTTC	8701	False	NA	19	True	AATAAA	-24	NA	142449809	142463562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142458140_142459662_142460270_142460629_142460830_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.41	chr5	+	6439	11	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	63	junction_6	13.8188277360998	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8701	False	NA	16	True	AATAAA	-21	NA	142449809	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142461556_142462448_142462867_142462970
ES.27640.42	chr5	+	2517	16	NIC	ENSMUSG00000039623.14	novel	2965	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	30.4430981048615	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8701	False	NA	14	True	AATAAA	-19	NA	142449809	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462970
ES.27640.44	chr5	+	3570	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	3	intron_retention	FALSE	canonical	3	53	junction_8	14.8945007921096	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8701	False	NA	17	True	AATAAA	-22	NA	142449809	142463560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.45	chr5	+	3169	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	63	junction_7	13.5118995175152	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8701	False	NA	14	True	AATAAA	-19	NA	142449809	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.46	chr5	+	4597	15	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	1	intron_retention	TRUE	canonical	0	0	junction_8	32.792560754176	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	8701	False	NA	15	True	AATAAA	-20	NA	142449809	142463558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456543_142456806_142458140_142459662_142460270_142460584_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.48	chr5	+	4120	15	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	2	3	intron_retention	FALSE	canonical	3	53	junction_8	14.968845196962	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8702	False	NA	7	True	AATAAA	-17	NA	142449810	142464468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462867_142462970
ES.27640.49	chr5	+	2732	17	FSM	ENSMUSG00000039623.14	ENSMUST00000196055.2	2965	17	-17	250	3	2	multi-exon	FALSE	canonical	0	0	junction_11	25.1941678519057	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8703	False	NA	16	True	AATAAA	-21	NA	142449811	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.5	chr5	+	4986	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	17	2436	17	-2436	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCTGTTCCAAAGATTG	NA	False	NA	NA	False	ATTAAA	-10	NA	142387271	142445330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ES.27640.50	chr5	+	4434	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	4	3	intron_retention	FALSE	canonical	3	53	junction_8	15.511019179162	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8711	False	NA	7	True	AATAAA	-17	NA	142449819	142464468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460742_142461457_142461556_142462448_142462867_142462970
ES.27640.51	chr5	+	5538	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	5	7	intron_retention	FALSE	canonical	3	64	junction_9	12.0996845770419	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGCGGTGTCTTCTGGGTC	8712	False	NA	11	True	AATAAA	-21	NA	142449820	142464472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.52	chr5	+	2855	18	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3180373870648	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8712	False	NA	16	True	AATAAA	-21	NA	142449820	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142451365_142451450_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.53	chr5	+	7155	11	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	5	3	intron_retention	FALSE	canonical	0	0	junction_1	35.5325203159022	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGCGGTGTCTTCTG	8712	False	NA	7	True	AATAAA	-17	NA	142449820	142464468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142450355_142452012_142452148_142452230_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142458140_142459662_142460270_142460629_142461556_142462448_142462582_142462651
ES.27640.54	chr5	+	4307	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	13	-631	6	631	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGAGTGTTTTTGCC	8713	False	NA	NA	False	NA	NA	NA	142449821	142465096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.55	chr5	+	5742	14	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	53	junction_7	15.1004525971592	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTGGCACATGCCT	8721	False	NA	16	True	AATAAA	-21	NA	142449829	142463559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142455903_142456044_142456083_142456148_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.56	chr5	+	5314	12	NIC	ENSMUSG00000039623.14	novel	4594	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_9	28.0786969630091	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8721	False	NA	14	True	AATAAA	-19	NA	142449829	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142458140_142459662_142459806_142460176_142460270_142460629_142461556_142462448
ES.27640.57	chr5	+	3791	16	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	25.5516905289824	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8722	False	NA	14	True	AATAAA	-19	NA	142449830	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142450600_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.58	chr5	+	652	1	NIC	ENSMUSG00000039623.14	novel	382	3	NA	NA	7	-1822	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATTAAAAAACAAAGA	8727	False	NA	NA	False	NA	NA	NA	142449835	142450487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142449800_142450500
ES.27640.59	chr5	+	4839	12	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	2280	1	intron_retention	FALSE	canonical	0	0	junction_7	27.7107253156727	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGTGGCACATGCC	NA	False	NA	15	True	AATAAA	-20	NA	142452108	142463558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456543_142456806_142458140_142459662_142460742_142461457_142461556_142462448_142462582_142462651
ES.27640.6	chr5	+	4569	3	NNC	ENSMUSG00000056493.10	novel	687	2	NA	NA	19	4148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGGACTTAGAATATAG	NA	False	NA	NA	False	NA	NA	NA	142387273	142409523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142387797_142405233_142408672_142408915
ES.27640.60	chr5	+	4574	8	ISM	ENSMUSG00000039623.14	ENSMUST00000196405.5	4594	14	6058	-913	-3980	5	3prime_fragment	FALSE	canonical	3	53	junction_2	15.172477768402	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGCGGTGTCTTCTGGG	1899	False	NA	9	True	AATAAA	-19	NA	142455873	142464470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142455903_142456044_142456083_142456148_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448
ES.27640.61	chr5	+	1962	10	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-3955	0	intron_retention	FALSE	canonical	0	0	junction_3	28.7586809223765	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	1924	False	NA	14	True	AATAAA	-19	NA	142455898	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142456083_142456148_142456312_142457957_142458144_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.62	chr5	+	4971	8	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-3799	0	intron_retention	FALSE	canonical	3	53	junction_1	15.745423695377	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	2080	False	NA	14	True	AATAAA	-19	NA	142456054	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142456083_142456148_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.63	chr5	+	3243	6	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	-2845	0	intron_retention	FALSE	canonical	3	75	junction_3	8.73155198117723	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	3034	False	NA	14	True	AATAAA	-19	NA	142457008	142463557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142458140_142459662_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.64	chr5	+	3736	5	NIC	ENSMUSG00000039623.14	novel	4594	14	NA	NA	-2584	-5	intron_retention	FALSE	canonical	3	75	junction_4	7.76208734813001	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCATGAGGGCGCGGT	3295	False	NA	-1	True	AATAAA	-9	NA	142457269	142464460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142458140_142459662_142459806_142460128_142460742_142461457_142461556_142462448
ES.27640.65	chr5	+	4216	2	NIC	ENSMUSG00000039623.14	novel	4594	14	NA	NA	-1402	3	intron_retention	FALSE	canonical	3	75	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	4477	False	NA	17	True	AATAAA	-22	NA	142458451	142463560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142461556_142462448
ES.27640.7	chr5	+	6965	9	NNC	ENSMUSG00000056493.10	novel	7439	9	NA	NA	30741	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5822670066484	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATTATATATTAA	NA	False	NA	-13	True	NA	NA	NA	142417995	142447741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142418089_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ES.27640.8	chr5	+	2797	17	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	23.9736183126369	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCACATGCCTTTCA	8645	False	NA	20	True	AATAAA	-25	NA	142449753	142463563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456193_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27640.9	chr5	+	2832	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	-48	905	7	3	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGTGGCACATGCCTT	8652	False	NA	17	True	AATAAA	-22	NA	142449760	142463560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ES.27641.1	chr5	-	178	1	Intergenic	novelGene_23001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTACC	NA	False	NA	NA	False	NA	NA	NA	142438267	142438089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142438100_142438300
ES.27642.1	chr5	+	213	1	Intergenic	novelGene_23002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTAGTCTTTATGTCA	NA	False	NA	NA	False	NA	NA	NA	142476967	142477180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142477000_142477200
ES.27643.1	chr5	+	180	1	Intergenic	novelGene_23004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTTTTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142518996	142519176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142519000_142519200
ES.27644.1	chr5	+	180	1	Intergenic	novelGene_23008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAATAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	142547413	142547593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142547400_142547600
ES.27645.1	chr5	+	191	1	Intergenic	novelGene_23010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	142579965	142580156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142580000_142580200
ES.27646.1	chr5	+	4326	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-62	907	-62	-907	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTGCATGGTTTTTGT	NA	False	NA	23	True	AATAAA	-24	NA	142615234	142655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.10	chr5	+	4292	12	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	20	-916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.709663573759	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615316	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648732_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.11	chr5	+	9937	6	NIC	ENSMUSG00000029578.16	novel	1959	12	NA	NA	21	-916	intron_retention	FALSE	canonical	2	44	junction_5	148.198515512133	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615317	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142645381_142646779_142651947_142652614
ES.27646.14	chr5	+	7172	10	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	23	-926	intron_retention	FALSE	canonical	3	377	junction_7	30.6646537181544	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAAAGCTCCCAGAG	NA	False	NA	4	True	AATAAA	-5	NA	142615319	142655417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.16	chr5	+	7311	9	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-23	-919	intron_retention	FALSE	canonical	3	377	junction_6	33.6851228289285	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615322	142655424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142645381_142646779_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.17	chr5	+	5000	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-23	-921	intron_retention	FALSE	canonical	3	377	junction_8	30.5312954196182	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCTCCCAGAGTCAAG	NA	False	NA	9	True	AATAAA	-10	NA	142615322	142655422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.18	chr5	+	2009	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-23	48	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.758883188695	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCTGGGACTAGCTTC	NA	False	NA	16	True	ATTAAA	-16	NA	142615322	142653290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.19	chr5	+	4350	8	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-22	-335	intron_retention	FALSE	canonical	3	395	junction_3	29.6861130180839	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTTATGAATTTAGCT	NA	False	NA	31	True	AATACA	-23	NA	142615323	142652907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142645381_142646779_142646851_142648789_142648898_142650079_142652007_142652614
ES.27646.2	chr5	+	1873	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-34	3332	-34	-231	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGGAGTCTCCTTG	NA	False	NA	135	True	NA	NA	NA	142615262	142653011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.20	chr5	+	4523	13	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-18	-926	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.430220060458	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAAAGCTCCCAGAG	NA	False	NA	4	True	AATAAA	-5	NA	142615327	142655417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142622784_142623094_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.21	chr5	+	4302	13	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-18	-919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	159.825164893809	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615327	142655424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651455_142651537_142651848_142652007_142652614
ES.27646.22	chr5	+	4214	12	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-17	-916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.156555611476	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615328	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652623
ES.27646.23	chr5	+	6162	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-17	-916	intron_retention	FALSE	canonical	3	377	junction_8	32.5915633254988	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615328	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.24	chr5	+	4239	12	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-17	-916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	168.091081174011	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615328	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645285_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651163_142651286_142651848_142652007_142652614
ES.27646.25	chr5	+	4162	12	FSM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	-18	-2185	-16	-916	multi-exon	FALSE	canonical	2	44	junction_11	110.780253036405	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615329	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142651947_142652614
ES.27646.26	chr5	+	2500	7	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	-18	4762	-16	16	5prime_fragment	FALSE	canonical	3	395	junction_3	22.8983259941275	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTGTTTAACGACTAA	NA	False	NA	NA	False	NA	NA	NA	142615329	142648480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779
ES.27646.27	chr5	+	3087	9	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-15	-337	intron_retention	FALSE	canonical	1	1	junction_7	146.124091100681	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGCTTATGAATTTAG	NA	False	NA	29	True	AATACA	-21	NA	142615330	142652905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142650079_142652007_142652614
ES.27646.28	chr5	+	6076	10	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-14	-916	intron_retention	FALSE	canonical	3	12	junction_1	135.300032392576	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615331	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.29	chr5	+	4228	12	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-13	-919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	166.948797020063	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615332	142655424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644800_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651184_142651286_142651848_142652007_142652614
ES.27646.3	chr5	+	4184	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	-10	-914	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.758883188695	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGAGTCAAGTGCATGG	NA	False	NA	16	True	AATAAA	-17	NA	142615286	142655429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.30	chr5	+	3987	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	18	47	intron_retention	FALSE	canonical	3	377	junction_8	32.5915633254988	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTCTGGGACTAGCTT	NA	False	NA	15	True	ATTAAA	-15	NA	142615365	142653289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.31	chr5	+	7258	9	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	18	-922	intron_retention	FALSE	canonical	0	0	junction_6	144.56048690773	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAGCTCCCAGAGTCAA	NA	False	NA	8	True	AATAAA	-9	NA	142615365	142655421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142645381_142646779_142648898_142650079_142650245_142651184_142651286_142651848_142652007_142652614
ES.27646.32	chr5	+	1608	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	125	3438	74	-337	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGCTTATGAATTTAG	NA	False	NA	29	True	AATACA	-21	NA	142615421	142652905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.33	chr5	+	4108	12	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	91	-914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	126.902578629474	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGAGTCAAGTGCATGG	NA	False	NA	16	True	AATAAA	-17	NA	142615438	142655429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651184_142651286_142651848_142652007_142652614
ES.27646.35	chr5	+	1682	10	ISM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	26257	-48	-6664	48	3prime_fragment	FALSE	canonical	2	44	junction_9	121.007805074255	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCTGGGACTAGCTTC	NA	False	NA	16	True	ATTAAA	-16	NA	142641604	142653290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142651947_142652614
ES.27646.36	chr5	+	2115	8	ISM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	29582	2356	-3390	745	3prime_fragment	FALSE	canonical	3	377	junction_5	33.1877774403254	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATCTGCATTCTAAAGA	NA	False	NA	NA	False	NA	NA	NA	142644878	142653987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.37	chr5	+	4477	4	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	202	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	213.024776858363	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCAAGGGGACTGTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	142648470	142656341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142648898_142650079_142650245_142651848_142652007_142652614
ES.27646.38	chr5	+	2629	3	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	262	-338	intron_retention	FALSE	canonical	3	405	junction_1	23.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTGCTTATGAATTTA	NA	False	NA	28	True	AATACA	-20	NA	142648530	142652904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142648898_142650079_142651286_142651848
ES.27646.39	chr5	+	3269	2	ISM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	36249	921	3277	-921	3prime_fragment	FALSE	canonical	3	489	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCTCCCAGAGTCAAG	NA	False	NA	9	True	AATAAA	-10	NA	142651545	142655422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142652007_142652614
ES.27646.4	chr5	+	5174	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	-3	0	-3	0	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGGGACTGTCCTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	142615293	142656343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.5	chr5	+	2288	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	3	2880	3	221	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTAAATGCTCTGTCTCC	NA	False	NA	NA	False	AAGAAA	-17	NA	142615299	142653463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.6	chr5	+	2115	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	3	3053	3	48	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCTGGGACTAGCTTC	NA	False	NA	16	True	ATTAAA	-16	NA	142615299	142653290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.7	chr5	+	4336	13	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	4	-919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	162.000750169731	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615300	142655424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142647136_142647225_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ES.27646.8	chr5	+	7117	10	NNC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	4	-916	intron_retention	FALSE	non_canonical	0	0	junction_2	139.073211024594	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAGAGTCAAGTGCAT	NA	False	NA	14	True	AATAAA	-15	NA	142615300	142655427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142615588_142623956_142624040_142641608_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142648898_142650079_142651286_142651848_142652007_142652614
ES.27647.1	chr5	-	4707	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	35	-1042	-1	1042	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTCCAGTCTTTGGT	NA	False	NA	NA	False	AGTAAA	-16	NA	142536818	142469551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.10	chr5	-	4150	13	NIC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	1217	1	intron_retention	FALSE	canonical	3	29	junction_11	9.03234926989282	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGGATGTAGGATCTG	531	False	NA	-7	True	AATAAA	-19	NA	142529566	142470595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142471004_142471167_142471308_142471609_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ES.27647.11	chr5	-	3965	14	FSM	ENSMUSG00000029576.18	ENSMUST00000139824.2	3963	14	-3	1	-3	-1	multi-exon	FALSE	canonical	3	29	junction_11	8.50687156981492	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGGGGATGTAGGATC	NA	False	NA	-9	True	AATAAA	-17	NA	142536820	142470597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142471004_142471167_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.13	chr5	-	2170	11	NNC	ENSMUSG00000029576.18	novel	3106	14	NA	NA	7110	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.6523035731587	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATAGTGGGGATGTAGGA	NA	False	NA	-11	True	AATAAA	-15	NA	142488139	142470599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142488029
ES.27647.14	chr5	-	4727	13	NNC	ENSMUSG00000029576.18	novel	3708	15	NA	NA	26	-7	intron_retention	FALSE	canonical	1	1	junction_8	14.7542366796795	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTATAGTGGGGATGT	NA	False	NA	-15	True	AATAAA	-11	NA	142536791	142470603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142471004_142471167_142471308_142471609_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483750_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.15	chr5	-	2859	9	ISM	ENSMUSG00000029576.18	ENSMUST00000110785.2	3708	15	19	8769	4	-7165	5prime_fragment	FALSE	canonical	3	29	junction_6	9.7459927662604	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTAACTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	142536813	142479402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.16	chr5	-	173	1	Intergenic	novelGene_23003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATATGACTCG	5229	False	NA	NA	False	NA	NA	NA	142496580	142496407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142496400_142496600
ES.27647.17	chr5	-	5687	3	Fusion	ENSMUSG00000029576.18_ENSMUSG00000074817.3	novel	426	2	NA	NA	26	-9	multi-exon	FALSE	canonical	0	0	junction_1	22.5	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAAAACACTGGCCAGA	NA	False	NA	NA	False	AATAAA	-21	NA	142536791	142511601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_142516633_142529159_142529759_142536734
ES.27647.18	chr5	-	3753	3	Fusion	ENSMUSG00000029576.18_ENSMUSG00000074817.3	novel	426	2	NA	NA	-38	-1904	multi-exon	FALSE	canonical	1	2	junction_1	21.5	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCAAAGGCCCTTACAC	NA	False	NA	NA	False	AATAAA	-22	NA	142536758	142513496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_142516627_142529159_142529759_142536734
ES.27647.19	chr5	-	5135	2	ISM	ENSMUSG00000029576.18	ENSMUST00000110785.2	3708	15	3	54085	3	4654	5prime_fragment	FALSE	canonical	3	45	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTACGTAAAAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	142536829	142524718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_142529759_142536734
ES.27647.2	chr5	-	4535	17	NNC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	6	1040	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.8966296565321	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTGGTCCAGTCTTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	142536811	142469553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142469823_142469933_142470300_142470351_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.20	chr5	-	177	2	Intergenic	novelGene_23005	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	225	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCCAGAGCAAGCGAGG	NA	False	NA	NA	False	NA	NA	NA	142631463	142528703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142528719_142631301
ES.27647.21	chr5	-	176	1	Intergenic	novelGene_23006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGTCTATGGGGA	NA	False	NA	NA	False	NA	NA	NA	142538870	142538694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142538700_142538900
ES.27647.22	chr5	-	181	1	Intergenic	novelGene_23007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	142539971	142539790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142539800_142540000
ES.27647.23	chr5	-	232	1	Intergenic	novelGene_23009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATTACTGTGAT	5034	False	NA	NA	False	ATTAAA	-22	NA	142559462	142559230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142559200_142559500
ES.27647.24	chr5	-	212	1	Intergenic	novelGene_23011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGGCTCCAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	142631463	142631251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142631300_142631500
ES.27647.3	chr5	-	3700	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	3	-3	3	3	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTAGGATCTGCACTG	NA	False	NA	-2	True	AATAAA	-24	NA	142536850	142470590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.4	chr5	-	4711	13	NIC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	18	0	intron_retention	FALSE	canonical	3	29	junction_10	8.81720225216341	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATGTAGGATCTGCA	NA	False	NA	-5	True	AATAAA	-21	NA	142536799	142470593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142471004_142471167_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.5	chr5	-	3733	15	FSM	ENSMUSG00000029576.18	ENSMUST00000110785.2	3708	15	14	-39	-1	-1	multi-exon	FALSE	canonical	1	1	junction_4	14.0174817966127	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGATGTAGGATCTGC	NA	False	NA	-6	True	AATAAA	-20	NA	142536818	142470594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472931_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27647.6	chr5	-	6545	6	NNC	ENSMUSG00000029576.18	novel	3963	14	NA	NA	-7406	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	20.4098015668943	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGATGTAGGATCTGC	NA	False	NA	-6	True	AATAAA	-20	NA	142480730	142470594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142471004_142471167_142473393_142474157_142476135_142478288_142478626_142478798_142480156_142480490
ES.27647.7	chr5	-	6758	4	NIC	ENSMUSG00000029576.18	novel	3708	15	NA	NA	-5260	1	intron_retention	FALSE	canonical	3	35	junction_1	7.78888096369861	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGGATGTAGGATCTG	NA	False	NA	-7	True	AATAAA	-19	NA	142478584	142470595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142471004_142471167_142471308_142471609_142473393_142474157
ES.27647.8	chr5	-	3644	15	NIC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	13.9532747966569	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGGATGTAGGATCTG	NA	False	NA	-7	True	AATAAA	-19	NA	142536745	142470595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536680
ES.27647.9	chr5	-	4057	14	NIC	ENSMUSG00000029576.18	novel	3700	15	NA	NA	-7	1	intron_retention	FALSE	canonical	3	29	junction_11	8.72526088519953	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGGATGTAGGATCTG	NA	False	NA	-7	True	AATAAA	-19	NA	142536860	142470595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ES.27648.1	chr5	+	2390	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	-73	472	-73	-472	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTCATACACAGGCCTC	NA	False	NA	NA	False	CATAAA	-21	NA	142687782	142707773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
ES.27648.2	chr5	+	2810	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	-21	0	-21	0	multi-exon	FALSE	canonical	3	36	junction_7	3.13847096529504	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCTGTCCTGAGGAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	142687834	142708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
ES.27649.1	chr5	+	2555	1	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	142713325	142715880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142713300_142715900
ES.2765.1	chr10	+	175	2	Intergenic	novelGene_2106	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATGTCCCAAAT	NA	False	NA	NA	False	NA	NA	NA	52090033	52125582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52090174_52125547
ES.2765.10	chr10	+	1737	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-44	1102	-26	-1100	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCGGTGTTTGTTTT	NA	False	NA	7	True	NA	NA	NA	52109688	52196372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.11	chr10	+	2627	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-29	197	-11	-195	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAAAAATCCT	NA	False	NA	NA	False	AAGAAA	-10	NA	52109703	52197277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.12	chr10	+	2121	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-5	908	-5	-908	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATGAAATTACTTGAA	NA	False	NA	NA	False	AGTAAA	-27	NA	52109709	52196564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.13	chr10	+	1836	4	NNC	ENSMUSG00000019891.16	novel	4859	3	NA	NA	-5	-19984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.1526453879229	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52109709	52144657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52109801_52109858_52109932_52137822_52137913_52143075
ES.2765.14	chr10	+	1924	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	0	1100	0	-1100	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGCGGTGTTTGTTTT	NA	False	NA	7	True	NA	NA	NA	52109714	52196372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.15	chr10	+	2810	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	-17	2	1	0	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCTGACTTCTATTTG	NA	False	NA	6	True	AATAAA	-16	NA	52109715	52197472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.16	chr10	+	2682	8	NIC	ENSMUSG00000019891.16	novel	2795	10	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	75.8962772338616	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCCCCTGACTTCTAT	NA	False	NA	3	True	AATAAA	-13	NA	52109715	52197469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52160198_52160334_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.17	chr10	+	5649	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	170	junction_2	11.5277443105271	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52109715	52197471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52193248_52195571
ES.2765.18	chr10	+	2937	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	59.3223044264898	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	8	True	AATAAA	-18	NA	52109715	52197474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52190450_52190501_52193127_52193248_52195571
ES.2765.19	chr10	+	3011	11	NNC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.7450430773066	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTGACTTCTATTTGG	NA	False	NA	7	True	AATAAA	-17	NA	52109720	52197473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195579
ES.2765.2	chr10	+	156	1	Intergenic	novelGene_2107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52090036	52090192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52090000_52090200
ES.2765.20	chr10	+	2897	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	60.8203182424353	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52109720	52197471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52195571
ES.2765.21	chr10	+	2853	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	16	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	58.3357671449949	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCCCCTGACTTCTAT	NA	False	NA	3	True	AATAAA	-13	NA	52109748	52197469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.22	chr10	+	1174	11	NNC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	25	-3175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.7450430773066	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	52109757	52194297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52194203
ES.2765.24	chr10	+	4111	10	NIC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	169	-179	intron_retention	FALSE	canonical	3	170	junction_2	11.9979422103939	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTTGCAAATTGTA	NA	False	NA	NA	False	AAGAAA	-26	NA	52109901	52197293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52190501_52193127_52193248_52195571
ES.2765.25	chr10	+	188	1	Intergenic	novelGene_2109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATGTCCCAAATA	NA	False	NA	NA	False	NA	NA	NA	52125395	52125583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52125400_52125600
ES.2765.26	chr10	+	7392	1	Intergenic	novelGene_2111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCTTGGGGAGCTAA	NA	False	NA	NA	False	NA	NA	NA	52151569	52158961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52151600_52159000
ES.2765.27	chr10	+	3136	11	NNC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	45985	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.4208120297478	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTGACTTCTATTTGG	NA	False	NA	7	True	AATAAA	-17	NA	52155717	52197473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52156192_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52194203_52194271_52195571
ES.2765.28	chr10	+	2594	9	ISM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	50465	3	50465	-1	3prime_fragment	FALSE	canonical	3	177	junction_7	10.9822299648113	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52160197	52197471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.29	chr10	+	4451	5	ISM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	75511	3	75511	-1	3prime_fragment	FALSE	canonical	3	177	junction_3	8.8140512819021	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52185243	52197471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.3	chr10	+	168	1	Intergenic	novelGene_2108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGCGAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	52104852	52105020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52104900_52105000
ES.2765.30	chr10	+	3227	2	ISM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	81086	1105	81086	-1103	3prime_fragment	FALSE	canonical	3	177	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAAGTTTGCGGTGTTTGT	NA	False	NA	4	True	NA	NA	NA	52190818	52196369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_52193248_52195571
ES.2765.4	chr10	+	2897	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-52	179	-52	-179	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTTGCAAATTGTA	NA	False	NA	NA	False	AAGAAA	-26	NA	52109662	52197293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.7	chr10	+	3053	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-28	-1	-28	1	multi-exon	FALSE	canonical	3	170	junction_2	11.5134703716994	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTGACTTCTATTTGG	NA	False	NA	7	True	AATAAA	-17	NA	52109686	52197473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ES.2765.8	chr10	+	1202	6	ISM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	-28	16306	-28	-16306	5prime_fragment	FALSE	canonical	3	170	junction_2	13.4669966956259	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCGAGTTTCAACG	NA	False	NA	NA	False	NA	NA	NA	52109686	52181166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682
ES.2765.9	chr10	+	2998	12	NNC	ENSMUSG00000019891.16	novel	3024	11	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.0934592869094	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCCTGACTTCTATTT	NA	False	NA	5	True	AATAAA	-15	NA	52109688	52197471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571_52197393_52197443
ES.27650.1	chr5	+	7361	24	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGGGGGGGCTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	142718139	142803441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142718305_142719304_142719421_142722396_142722510_142722630_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157_142729592_142736138_142736389_142741131_142741415_142745465_142745827_142748744_142748916_142750804_142750943_142751667_142751844_142757059_142758061_142759375_142759804_142760963_142761155_142761583_142761730_142761929_142762137_142762400_142762497_142772887_142774515_142775818_142775944_142800768_142801197_142803021
ES.27650.10	chr5	+	168	1	Intergenic	novelGene_23014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTGAACC	NA	False	NA	NA	False	NA	NA	NA	142758275	142758443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142758300_142758400
ES.27650.12	chr5	+	160	1	Intergenic	novelGene_23015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTTTAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	142765660	142765820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142765700_142765800
ES.27650.13	chr5	+	1322	2	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGGCTTTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	142800022	142801747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142800104_142800506
ES.27650.2	chr5	+	7648	26	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGGGGGGGCTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	142718140	142803441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142718308_142718621_142718784_142719301_142719421_142722396_142722510_142722630_142722702_142723389_142723509_142725167_142725310_142725869_142726019_142729157_142729592_142736138_142736389_142741131_142741415_142745465_142745827_142748744_142748916_142750522_142750651_142750805_142750943_142751667_142751844_142757059_142758061_142759377_142759804_142760963_142761155_142761583_142761730_142761929_142762137_142762401_142762497_142772887_142774516_142775820_142775944_142800768_142801206_142803029
ES.27650.3	chr5	+	7220	24	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142718141	142803416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142718308_142718621_142718784_142719301_142719421_142722396_142722510_142722630_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157_142729592_142736138_142736390_142745465_142745827_142748744_142748916_142750804_142750943_142751667_142751844_142757059_142758061_142759375_142759804_142760963_142761155_142761583_142761730_142761929_142762137_142762400_142762497_142772887_142774515_142775818_142775944_142800768_142801197_142803021
ES.27650.4	chr5	+	7630	26	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142718141	142803417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142718308_142718621_142718784_142719301_142719421_142722396_142722510_142722630_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157_142729592_142736138_142736385_142741131_142741415_142745465_142745827_142748744_142748916_142750522_142750653_142750804_142750943_142751667_142751844_142757059_142758061_142759375_142759804_142760963_142761155_142761582_142761730_142761929_142762137_142762400_142762497_142772887_142774515_142775818_142775944_142800768_142801197_142803021
ES.27650.5	chr5	+	7811	27	Antisense	novelGene_ENSMUSG00000039477.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGGGGGGGCTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	142718141	142803441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142718308_142718621_142718784_142719301_142719421_142722396_142722510_142722630_142722706_142723392_142723510_142725167_142725310_142725869_142726020_142729157_142729592_142736138_142736389_142741131_142741415_142745465_142745827_142748744_142748916_142750522_142750652_142750804_142750943_142751667_142751844_142757059_142758061_142759375_142759804_142760963_142761155_142761583_142761730_142761929_142762137_142762400_142762497_142772887_142774515_142775818_142775944_142778758_142778915_142800768_142801197_142803021
ES.27650.9	chr5	+	173	1	Intergenic	novelGene_23013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	3101	False	NA	NA	False	NA	NA	NA	142737170	142737343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142737200_142737300
ES.27651.1	chr5	-	6722	20	NIC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	-5938	55	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	66.5205277295534	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGTCTTTGGAGTGACT	NA	False	NA	NA	False	NA	NA	NA	142757715	142710360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142711943_142712732_142712808_142713595_142713833_142716949_142718305_142718618_142718787_142719304_142719422_142722397_142722507_142722629_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157_142729586_142736134_142736390_142741135_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059
ES.27651.10	chr5	-	5543	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2183	306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4319515563906	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAACACAAC	2033	False	NA	NA	False	NA	NA	NA	142800952	142740237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142740500_142741113_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769
ES.27651.11	chr5	-	5901	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	42.149696781537	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	8461	False	NA	NA	False	ATTAAA	-26	NA	142786290	142740543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142786057
ES.27651.12	chr5	-	6490	16	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_14	28.7986110776197	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803417	142740543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.13	chr5	-	5777	15	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-298	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.2196449071657	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	8261	False	NA	NA	False	ATTAAA	-26	NA	142786490	142740543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142786378
ES.27651.14	chr5	-	8106	14	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-138	0	intron_retention	FALSE	canonical	3	90	junction_12	30.5224720783744	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803273	142740543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.15	chr5	-	6356	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	43.7225132313469	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	142803415	142740546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.18	chr5	-	5945	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_15	49.6769116950275	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	8570	False	NA	NA	False	ATTAAA	-23	NA	142786181	142740546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142786057
ES.27651.19	chr5	-	6641	17	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_15	45.1725857130185	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTGCCTCGTTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	142803415	142740546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142800769_142801201_142803026
ES.27651.2	chr5	-	4045	11	NIC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	-6263	54	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.283968105746	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGTCTTTGGAGTGAC	4679	False	NA	NA	False	NA	NA	NA	142729242	142710361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142711943_142712732_142712808_142713595_142713833_142716949_142718305_142719304_142719422_142722397_142722507_142722629_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157
ES.27651.20	chr5	-	6216	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-127	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	43.4759703744494	202	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	142803262	142740548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745579_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.21	chr5	-	8832	12	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-129	-5	intron_retention	FALSE	canonical	3	90	junction_10	31.621208491237	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	142803264	142740548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.22	chr5	-	6371	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	141	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	53.9533131512792	202	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	142803276	142740548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142800769_142801201_142803026
ES.27651.23	chr5	-	5770	15	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-2605	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	44.424494530447	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACTGTGTGCCTCGTTT	5954	False	NA	NA	False	ATTAAA	-21	NA	142788797	142740548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142788690
ES.27651.24	chr5	-	6145	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-1126	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	45.4319515563906	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	142804543	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142804490
ES.27651.25	chr5	-	3501	10	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-9850	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.7685942571968	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	142761627	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750647_142750801_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583
ES.27651.26	chr5	-	5718	16	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	2	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	61.7821980832667	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	8561	False	NA	NA	False	ATTAAA	-19	NA	142786190	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142757643_142757715_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142786057
ES.27651.27	chr5	-	10506	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	28	-7	intron_retention	FALSE	canonical	3	90	junction_13	27.7014882087514	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	142803389	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.29	chr5	-	5846	15	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	6319	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	44.8833522157431	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	6169	False	NA	NA	False	ATTAAA	-19	NA	142796816	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142796631
ES.27651.3	chr5	-	3881	11	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	-6372	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.1260051129793	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGTCTTTGGAGTGAC	4570	False	NA	NA	False	NA	NA	NA	142729351	142710361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142711943_142712732_142712808_142713595_142713833_142717222_142718305_142719304_142719422_142722397_142722507_142722629_142722706_142723392_142723511_142725167_142725310_142725869_142726020_142729157
ES.27651.30	chr5	-	6246	17	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	52.9941034455721	202	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	142803138	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745579_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142800769_142801201_142803026
ES.27651.31	chr5	-	6103	15	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-5347	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	44.424494530447	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	8897	False	NA	NA	False	ATTAAA	-19	NA	142808764	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142808322
ES.27651.32	chr5	-	6328	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	47.1387985265918	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	142803409	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ES.27651.33	chr5	-	5654	14	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	13	-7	combination_of_known_junctions	FALSE	canonical	3	12	junction_13	54.3767266610161	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	8572	False	NA	NA	False	ATTAAA	-19	NA	142786179	142740550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142786057
ES.27651.38	chr5	-	1125	2	ISM	ENSMUSG00000039477.17	ENSMUST00000198181.2	696	3	-261	21686	21	-21686	5prime_fragment	FALSE	canonical	3	97	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACAGCGTGTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	142803396	142800445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_142801201_142803026
ES.27651.4	chr5	-	2014	4	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	8169	40	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	12.0277457017791	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTGGAAAAATACTAT	NA	False	NA	NA	False	NA	NA	NA	142714267	142710375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142711943_142712732_142712808_142713595_142713833_142714132
ES.27651.5	chr5	-	4340	9	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	2899	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	74.7211482781147	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATTGGAAAAATACTAT	NA	False	NA	NA	False	NA	NA	NA	142748878	142710375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142711943_142712732_142712808_142713595_142713833_142716949_142718048_142729251_142729586_142736134_142736390_142741135_142741415_142745465_142745827_142748744
ES.27651.7	chr5	-	174	1	Intergenic	novelGene_23012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACATTACT	NA	False	NA	NA	False	NA	NA	NA	142713135	142712961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142713000_142713100
ES.27651.8	chr5	-	2365	5	NNC	ENSMUSG00000039477.17	novel	9342	25	NA	NA	-3189	-2145	intron_retention	TRUE	non_canonical	0	0	junction_1	14.6692706021806	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAACAACAAAAA	7753	False	NA	NA	False	NA	NA	NA	142726168	142720860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142721031_142721069_142722706_142723392_142723511_142725167_142725310_142725869
ES.27651.9	chr5	-	4113	11	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	-10347	306	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	21.5381057662924	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAACACAAC	NA	False	NA	NA	False	NA	NA	NA	142762124	142740237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930
ES.27652.1	chr5	-	198	1	Intergenic	novelGene_23016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTATTTTTGC	NA	False	NA	NA	False	NA	NA	NA	142833324	142833126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142833100_142833300
ES.27653.1	chr5	-	407	1	Intergenic	novelGene_23017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACTAACAGGTTGTT	NA	False	NA	NA	False	AAAAAG	-7	NA	142842118	142841711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142841700_142842100
ES.27653.2	chr5	-	172	1	Intergenic	novelGene_23018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGAAGAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	142842118	142841946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142841900_142842100
ES.27654.1	chr5	-	2465	1	Intergenic	novelGene_23019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAAAACAGATTAGCA	NA	False	NA	NA	False	NA	NA	NA	142852453	142849988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142850000_142852500
ES.27655.1	chr5	-	7649	5	FSM	ENSMUSG00000066640.12	ENSMUST00000110766.8	7857	5	204	4	21	-4	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCAGCCGTGTGGTCC	NA	False	NA	-5	True	AATAAA	-19	NA	142880972	142852704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
ES.27655.2	chr5	-	2820	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	12	-1	12	1	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTCCAGGATGTTT	NA	False	NA	-1	True	NA	NA	NA	142880981	142857542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
ES.27655.3	chr5	-	4397	4	NIC	ENSMUSG00000066640.12	novel	7857	5	NA	NA	21	1	intron_retention	FALSE	canonical	3	21	junction_1	5.55777733351102	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTCCAGGATGTTT	NA	False	NA	-1	True	NA	NA	NA	142880972	142857542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142858276_142864412_142864632_142871293_142874631_142880864
ES.27655.4	chr5	-	2651	6	NNC	ENSMUSG00000066640.12	novel	2831	5	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_3	11.1247471881387	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTCTCCAGGATGTT	NA	False	NA	-2	True	NA	NA	NA	142880952	142857543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142858276_142864412_142864632_142871293_142871583_142871721_142872838_142874423_142874631_142880864
ES.27655.5	chr5	-	178	1	Intergenic	novelGene_23020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	142876213	142876035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142876000_142876200
ES.27656.1	chr5	+	2242	2	Antisense	novelGene_ENSMUSG00000066640.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCATCTTGTCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	142881089	142883797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142881310_142881775
ES.27657.1	chr5	-	140	1	Intergenic	novelGene_23021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	142883077	142882937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142882900_142883100
ES.27658.1	chr5	+	1873	1	Antisense	novelGene_ENSMUSG00000029580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTACAAAGTCCTCAGC	NA	False	NA	NA	False	NA	NA	NA	142887402	142889275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142887400_142889300
ES.27658.2	chr5	+	2030	1	Antisense	novelGene_ENSMUSG00000029580.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	142887403	142889433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142887400_142889400
ES.27659.1	chr5	-	4699	5	NIC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	2721	intron_retention	FALSE	canonical	3	4052	junction_3	86.867715521936	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTAATTTTAGTA	8918	False	NA	NA	False	NA	NA	NA	142892480	142886148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891448_142892406
ES.27659.10	chr5	-	1858	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	-46	-5	intron_retention	FALSE	canonical	1	2	junction_5	1653.88047935756	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGCTCTGTG	9660	False	NA	-6	True	AATAAA	-22	NA	142891738	142888874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142891692
ES.27659.15	chr5	-	1878	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	1656.31755409402	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACAGCTTGTGGCTCTG	8918	False	NA	-8	True	AATAAA	-20	NA	142892480	142888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889697_142889821_142890004_142890098_142890532_142890991_142891232_142891318_142891448_142892406
ES.27659.16	chr5	-	1829	7	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	1537.10969752397	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACAGCTTGTGGCTCTG	8919	False	NA	-8	True	AATAAA	-20	NA	142892479	142888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891142_142891195_142891232_142891318_142891448_142892406
ES.27659.17	chr5	-	1917	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	-264	-7	intron_retention	FALSE	canonical	0	0	junction_5	1654.6796668842	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACAGCTTGTGGCTCTG	9442	False	NA	-8	True	AATAAA	-20	NA	142891956	142888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142891849
ES.27659.19	chr5	-	1726	7	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-7	intron_retention	TRUE	non_canonical	0	0	junction_1	1537.10969752397	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACAGCTTGTGGCTCTG	8918	False	NA	-8	True	AATAAA	-20	NA	142892480	142888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889256_142889413_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.2	chr5	-	1953	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	-34	1	-34	-1	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGCTCTGTGGCTT	8855	False	NA	-2	True	AATAAA	-26	NA	142892543	142888870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.21	chr5	-	1167	7	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	1537.10969752397	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACAGCTTGTGGCTCTG	8918	False	NA	-8	True	AATAAA	-20	NA	142892480	142888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142888929_142889645_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.22	chr5	-	1864	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_1	1632.92395413871	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAACAGCTTGTGGCTC	8918	False	NA	-10	True	AATAAA	-18	NA	142892480	142888878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889679_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.24	chr5	-	1698	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	29	193	0	-74	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	1838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTTAATACTTCATTTTT	8918	False	NA	-21	True	TTTAAA	-6	NA	142892480	142889062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.25	chr5	-	1341	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	-33	612	-33	-226	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGACAACATTGGCATG	8856	False	NA	17	True	NA	NA	NA	142892542	142889481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.27659.3	chr5	-	2004	6	NIC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	-100	-2	intron_retention	FALSE	canonical	3	37	junction_5	1639.89482589586	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGGCTCTGTGGCT	9606	False	NA	-3	True	AATAAA	-25	NA	142891792	142888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142891603
ES.27659.5	chr5	-	3605	1	NIC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	1	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1851	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGCTCTGTG	8919	False	NA	-6	True	AATAAA	-22	NA	142892479	142888874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142888900_142892500
ES.27659.7	chr5	-	1878	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	1652.22787774568	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGCTCTGTG	8918	False	NA	-6	True	AATAAA	-22	NA	142892480	142888874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891326_142891448_142892406
ES.27659.9	chr5	-	1347	7	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	1537.10969752397	1851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGTGGCTCTGTG	8918	False	NA	-6	True	AATAAA	-22	NA	142892480	142888874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142888929_142889467_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ES.2766.1	chr10	-	176	1	Intergenic	novelGene_2110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	52127568	52127392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52127400_52127600
ES.27660.1	chr5	+	159	1	Intergenic	novelGene_23022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	5910	False	NA	NA	False	NA	NA	NA	142915897	142916056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142915900_142916100
ES.27661.1	chr5	+	2101	1	Intergenic	novelGene_23023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTCCCTGGGGGTTGG	7661	False	NA	NA	False	NA	NA	NA	142917648	142919749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142917600_142919700
ES.27662.1	chr5	+	179	1	Intergenic	novelGene_23024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	142920017	142920196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142920000_142920200
ES.27663.1	chr5	-	176	1	Intergenic	novelGene_23025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCCAGGCGTGGTG	5932	False	NA	NA	False	NA	NA	NA	142923175	142922999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142923000_142923200
ES.27664.1	chr5	-	185	1	Intergenic	novelGene_23026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAAAGGGGAGG	5374	False	NA	NA	False	NA	NA	NA	142923733	142923548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142923500_142923700
ES.27665.1	chr5	+	3268	6	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	-5131	3	intron_retention	FALSE	canonical	0	0	junction_1	1109.30194266485	2190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGTGTCTCAGGGGAAG	NA	False	NA	21	True	AATAAA	-21	NA	142940966	142958943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142941095_142945635_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.11	chr5	+	2993	3	NIC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	2668	junction_2	43.5	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946111	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142947036_142955659_142956441_142957650
ES.27665.12	chr5	+	4201	2	ISM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	14	4	14	-2	intron_retention	FALSE	canonical	3	2755	junction_1	0	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142946111	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142947036_142955659
ES.27665.13	chr5	+	2675	5	NNC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	14	1	intron_retention	FALSE	canonical	1	2	junction_4	1212.18707302132	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGTGTCTCAGGGGA	NA	False	NA	19	True	AATAAA	-19	NA	142946111	142958941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957637
ES.27665.14	chr5	+	2624	5	NNC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	14	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	1201.66579692525	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142946111	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947009_142955665_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.15	chr5	+	2703	6	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_5	1369.33668613676	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142946112	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957448_142957496_142957650
ES.27665.17	chr5	+	2541	6	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	-16	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1109.30194266485	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946114	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650_142958669_142958783
ES.27665.19	chr5	+	2103	6	NNC	ENSMUSG00000029581.15	novel	344	4	NA	NA	-725	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1348.18698999805	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142947982	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142948268_142948652_142948738_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.2	chr5	+	1308	2	NNC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTGTGTCTCAGGGG	NA	False	NA	18	True	AATAAA	-18	NA	142946110	142958940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142946937_142958458
ES.27665.20	chr5	+	2065	5	NNC	ENSMUSG00000029581.15	novel	466	3	NA	NA	-706	0	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_1	1175.41545846564	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142948001	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142948332_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.21	chr5	+	1830	5	NNC	ENSMUSG00000029581.15	novel	466	3	NA	NA	422	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1201.66579692525	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142949426	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142949524_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.22	chr5	+	2001	6	NNC	ENSMUSG00000029581.15	novel	466	3	NA	NA	434	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1371.33094473945	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142949438	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142949524_142955659_142955817_142955921_142956044_142956272_142956441_142956660_142956842_142957650
ES.27665.23	chr5	+	4091	3	NIC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	-2309	-2	intron_retention	FALSE	canonical	3	2634	junction_1	17	2179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142953530	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142955817_142955921_142956441_142957650
ES.27665.3	chr5	+	2773	6	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_4	1360.3580999134	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946110	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142956728_142956842_142957650
ES.27665.4	chr5	+	2652	5	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_1	1201.66579692525	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946110	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947028_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ES.27665.5	chr5	+	2650	5	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1213.04874180719	2184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946110	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956431_142957650
ES.27665.6	chr5	+	3868	4	ISM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	13	4	13	-2	intron_retention	FALSE	canonical	3	2634	junction_2	140.271958075099	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCCGTGTGTGTCTCA	NA	False	NA	14	True	AATAAA	-14	NA	142946110	142958936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272
ES.27665.7	chr5	+	5024	1	NIC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	13	-5173	mono-exon	FALSE	NA	NA	NA	NA	NA	2117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACAACCTGAGGCTTT	NA	False	NA	NA	False	AAAACA	-6	NA	142946110	142951134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142946100_142951100
ES.27665.8	chr5	+	2764	4	NIC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	2668	junction_3	128.287004624613	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946111	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_142947036_142955659_142956044_142956272_142956441_142957650
ES.27665.9	chr5	+	2609	6	NNC	ENSMUSG00000029581.15	novel	2157	6	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1109.30194266485	2184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946111	142958938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650_142958712_142958761
ES.27666.1	chr5	-	2584	1	Antisense	novelGene_ENSMUSG00000029581.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGAGTCACACTTGTA	NA	False	NA	NA	False	NA	NA	NA	142947335	142944751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_142944800_142947300
ES.27667.1	chr5	+	204	1	Intergenic	novelGene_23027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATTAAATTAATTGTT	311	False	NA	NA	False	NA	NA	NA	142961505	142961709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142961500_142961700
ES.27668.1	chr5	+	191	1	Intergenic	novelGene_23028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTGGGTGTTGGGA	1805	False	NA	NA	False	NA	NA	NA	142965488	142965679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_142965500_142965700
ES.27669.1	chr5	+	4483	2	Antisense	novelGene_ENSMUSG00000045078.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	142990624	142995172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_142991071_142991135
ES.2767.1	chr10	-	5585	1	Antisense	novelGene_ENSMUSG00000019891.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTAGGAAAATGGAGGTG	NA	False	NA	NA	False	NA	NA	NA	52183833	52178248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_52178200_52183800
ES.27670.1	chr5	+	3591	1	Intergenic	novelGene_23030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCCAAAACCAAAACCAA	9874	False	NA	NA	False	NA	NA	NA	143037691	143041282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143037700_143041300
ES.27671.1	chr5	+	464	1	Intergenic	novelGene_23032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAAATTG	NA	False	NA	NA	False	AATAAA	-12	NA	143085060	143085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143085100_143085500
ES.27672.1	chr5	+	239	1	Intergenic	novelGene_23035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTATCACTTGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	143091863	143092102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143091900_143092100
ES.27673.1	chr5	+	982	1	Antisense	novelGene_ENSMUSG00000045078.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAAAAAACCTC	NA	False	NA	NA	False	NA	NA	NA	143098507	143099489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_143098500_143099500
ES.27674.1	chr5	+	3063	1	Intergenic	novelGene_23036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAAGCAAGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	143102259	143105322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143102300_143105300
ES.27674.2	chr5	+	2168	2	Intergenic	novelGene_23037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGGAAAGCAAGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	143102259	143105322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143102783_143103677
ES.27675.1	chr5	-	4964	18	NNC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-9279	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	62.781104864662	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTTTGTCCCCAATTA	4985	False	NA	5	True	AATAAA	-22	NA	143108028	142976641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084256_143098653_143098929_143107889
ES.27675.10	chr5	-	4973	18	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-11423	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.647754368546	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	2841	False	NA	-1	True	AATAAA	-16	NA	143110172	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143107889_143108017_143109875
ES.27675.11	chr5	-	4604	18	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.5454529673726	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6139	False	NA	-1	True	AATAAA	-16	NA	143098740	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143039638_143039782_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075571_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27675.12	chr5	-	4350	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_14	52.1916979349526	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6123	False	NA	-1	True	AATAAA	-16	NA	143098756	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143084133_143084261_143098653
ES.27675.13	chr5	-	4386	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_15	54.0106985286763	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6091	False	NA	-1	True	AATAAA	-16	NA	143098788	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143098653
ES.27675.15	chr5	-	4555	16	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-9273	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.2350320074069	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	4991	False	NA	-1	True	AATAAA	-16	NA	143108022	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143107889
ES.27675.16	chr5	-	4397	16	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-9286	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	56.8368425114086	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	4978	False	NA	-1	True	AATAAA	-16	NA	143108035	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143107889
ES.27675.17	chr5	-	4226	15	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	54.7237962640662	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6120	False	NA	-1	True	AATAAA	-16	NA	143098759	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143098653
ES.27675.19	chr5	-	4517	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	63.4831211162988	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6122	False	NA	-1	True	AATAAA	-16	NA	143098757	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143084133_143084256_143098653
ES.27675.20	chr5	-	4540	18	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	68.6901674211529	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6146	False	NA	-1	True	AATAAA	-16	NA	143098733	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143083427_143083510_143084133_143084261_143098653
ES.27675.22	chr5	-	4880	18	NNC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	69.3805014340395	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6110	False	NA	-2	True	AATAAA	-15	NA	143098769	142976648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143078959_143079176_143084133_143084261_143098653
ES.27675.23	chr5	-	4584	16	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-67	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_15	54.4348744423605	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6063	False	NA	-2	True	AATAAA	-15	NA	143098816	142976648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143098653
ES.27675.29	chr5	-	4570	17	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	310	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.3059444019901	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6454	False	NA	-2	True	AATAAA	-15	NA	143098425	142976648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084256_143098227
ES.27675.3	chr5	-	4499	17	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-9265	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.3059444019901	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTCTGTTTGTCCCC	4999	False	NA	0	True	AATAAA	-17	NA	143108014	142976646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084256_143107889
ES.27675.30	chr5	-	4402	15	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	58.2465291950113	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGCTCTGTTTGTCC	6117	False	NA	-2	True	AATAAA	-15	NA	143098762	142976648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.34	chr5	-	4484	16	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	58.1662750703151	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6124	False	NA	-3	True	AATAAA	-14	NA	143098755	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.35	chr5	-	3843	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	64.8359982314352	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6115	False	NA	-3	True	AATAAA	-14	NA	143098764	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143078749_143078881_143084133_143084256_143098653
ES.27675.36	chr5	-	4373	16	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.4193412259478	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6172	False	NA	-3	True	AATAAA	-14	NA	143098707	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084256_143098653
ES.27675.37	chr5	-	4146	7	NNC	ENSMUSG00000045078.13	novel	1775	13	NA	NA	32606	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.09690071082	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	NA	False	NA	-3	True	AATAAA	-14	NA	143040976	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143032867_143033053_143036477_143036639_143039638
ES.27675.40	chr5	-	4200	14	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	75.6050935950402	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6125	False	NA	-3	True	AATAAA	-14	NA	143098754	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143098653
ES.27675.41	chr5	-	3428	12	NNC	ENSMUSG00000045078.13	novel	1775	13	NA	NA	1511	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	62.5853466862229	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	NA	False	NA	-3	True	AATAAA	-14	NA	143072071	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143071942
ES.27675.42	chr5	-	4409	18	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.6368318170395	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6145	False	NA	-3	True	AATAAA	-14	NA	143098734	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142977280_142977327_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27675.43	chr5	-	4615	17	NNC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.1847748477784	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6149	False	NA	-3	True	AATAAA	-14	NA	143098730	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065987_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.44	chr5	-	5160	16	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	5	-2	intron_retention	FALSE	canonical	3	116	junction_13	29.8727672340917	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	6149	False	NA	-3	True	AATAAA	-14	NA	143098730	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.45	chr5	-	3391	12	NNC	ENSMUSG00000045078.13	novel	1775	13	NA	NA	1538	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	62.5853466862229	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCTGTTTGTC	NA	False	NA	-3	True	AATAAA	-14	NA	143072044	142976649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143071952
ES.27675.46	chr5	-	3851	14	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-2683	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.2262282277071	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGGCTCTGTTTGT	NA	False	NA	-4	True	AATAAA	-13	NA	143076265	142976650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979259_142979327_143001378_143001602_143013715_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874
ES.27675.49	chr5	-	4378	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-40	136	-40	-136	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAGATGGTTAAAAGT	6090	False	NA	NA	False	NA	NA	NA	143098789	142976783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27675.5	chr5	-	4793	18	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-9279	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	54.2291051719542	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTCTGTTTGTCCCC	4985	False	NA	0	True	AATAAA	-17	NA	143108028	142976646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653_143098929_143107889
ES.27675.50	chr5	-	4533	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	-38	-791	-24	-136	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAGATGGTTAAAAGT	6106	False	NA	NA	False	NA	NA	NA	143098773	142976783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.51	chr5	-	3262	12	NNC	ENSMUSG00000045078.13	novel	1775	13	NA	NA	1533	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	62.5853466862229	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAGATGGTTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	143072049	142976783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143071952
ES.27675.52	chr5	-	4514	17	NNC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-9241	-136	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_16	55.0368839393184	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAGATGGTTAAAAGT	5023	False	NA	NA	False	NA	NA	NA	143107990	142976783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143107889
ES.27675.53	chr5	-	4228	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-21	-136	combination_of_known_junctions	FALSE	canonical	1	8	junction_14	52.1916979349526	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAGATGGTTAAAAGT	6109	False	NA	NA	False	NA	NA	NA	143098770	142976783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143084133_143084261_143098653
ES.27675.55	chr5	-	3157	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	-15	1332	-15	392	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTTTGAGCTGAAG	6115	False	NA	-8	True	NA	NA	NA	143098764	142977979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27675.56	chr5	-	3029	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-16	390	combination_of_known_splicesites	FALSE	canonical	3	13	junction_15	54.0106985286763	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTAGTTTGAGCTGA	6114	False	NA	-10	True	NA	NA	NA	143098765	142977981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143098653
ES.27675.57	chr5	-	3354	17	NNC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	-9279	390	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_16	55.0368839393184	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTAGTTTGAGCTGA	4985	False	NA	-10	True	NA	NA	NA	143108028	142977981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143107889
ES.27675.58	chr5	-	3163	16	NIC	ENSMUSG00000045078.13	novel	3704	17	NA	NA	2	389	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	54.0721328926052	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATGTAGTTTGAGCTG	6146	False	NA	-11	True	NA	NA	NA	143098733	142977982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143084133_143084261_143098653
ES.27675.59	chr5	-	3293	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	2	409	2	388	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCATGTAGTTTGAGCT	6146	False	NA	-12	True	NA	NA	NA	143098733	142977983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.60	chr5	-	4957	3	Intergenic	novelGene_23029	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	142999617	142989415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_142990449_142995229_142999013_142999476
ES.27675.62	chr5	-	7324	14	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	2	31065	2	-7512	5prime_fragment	FALSE	canonical	3	116	junction_11	31.2110585772862	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGCAGCTCTTTGCCC	6146	False	NA	NA	False	NA	NA	NA	143098733	143008639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.63	chr5	-	7139	15	NNC	ENSMUSG00000045078.13	novel	3148	13	NA	NA	-19	-7512	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59.902514341969	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGCAGCTCTTTGCCC	6111	False	NA	NA	False	NA	NA	NA	143098768	143008639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143010279_143010498_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.64	chr5	-	6897	15	NNC	ENSMUSG00000045078.13	novel	3148	13	NA	NA	6	-7544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.4929253211279	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGGAAA	6150	False	NA	NA	False	NA	NA	NA	143098729	143008671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143010279_143010498_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27675.65	chr5	-	173	1	Intergenic	novelGene_23031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGAAACTGCC	7940	False	NA	NA	False	NA	NA	NA	143048086	143047913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143047900_143048100
ES.27675.66	chr5	-	7299	2	NNC	ENSMUSG00000045078.13	novel	534	3	NA	NA	-1119	-589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGCAGTGGTGACACAA	NA	False	NA	NA	False	NA	NA	NA	143074701	143067361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143072018_143072058
ES.27675.67	chr5	-	2066	7	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	-33	93513	-19	-4315	5prime_fragment	FALSE	canonical	3	116	junction_4	37.2860563750043	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATTTAAATACACTGTGT	6111	False	NA	NA	False	AATAAA	-13	NA	143098768	143071087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ES.27675.68	chr5	-	393	1	Intergenic	novelGene_23033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAAACAGGAA	NA	False	NA	NA	False	NA	NA	NA	143091356	143090963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143091000_143091400
ES.27675.69	chr5	-	204	1	Intergenic	novelGene_23034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAGAGGGGGCTGGAG	NA	False	NA	NA	False	AAAAAG	-4	NA	143091357	143091153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143091200_143091400
ES.27675.70	chr5	-	178	1	Intergenic	novelGene_23038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAAAAAAAATGAAGGT	3307	False	NA	NA	False	NA	NA	NA	143109706	143109528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143109500_143109700
ES.27675.8	chr5	-	4899	17	NNC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	256	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_16	54.212220428147	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6400	False	NA	-1	True	AATAAA	-16	NA	143098479	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098129
ES.27675.9	chr5	-	5025	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	-15	0	intron_retention	FALSE	canonical	3	121	junction_13	28.9341013722946	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6115	False	NA	-1	True	AATAAA	-16	NA	143098764	142976647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ES.27676.1	chr5	-	443	1	NIC	ENSMUSG00000104529.5	novel	588	2	NA	NA	479	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	4004	False	NA	-3	True	AATAAA	-16	NA	143150979	143150536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143150500_143151000
ES.27676.2	chr5	-	539	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTGTGTCGCCTCCTA	3463	False	NA	-3	True	AATAAA	-16	NA	143151520	143150536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143150848_143151184_143151305_143151412
ES.27676.4	chr5	-	614	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTATTGTGTGTCGC	3461	False	NA	-9	True	AATAAA	-10	NA	143151522	143150542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143150848_143151105_143151305_143151412
ES.27677.1	chr5	-	6308	4	NIC	ENSMUSG00000061898.11	novel	3335	5	NA	NA	-31	3	intron_retention	FALSE	canonical	3	25	junction_3	5.43650214343336	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTATGTGTTGTGTTGC	NA	False	NA	NA	False	GATAAA	-6	NA	143166561	143157937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143160814_143161790_143161887_143162219_143165298_143166303
ES.27677.3	chr5	-	6347	4	NIC	ENSMUSG00000061898.11	novel	3480	5	NA	NA	-15	1	intron_retention	FALSE	canonical	1	1	junction_3	15.7550697307953	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTATGTGTTGTGTT	NA	False	NA	NA	False	GATAAA	-4	NA	143166502	143157939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143160814_143161790_143161887_143162219_143165398_143166303
ES.27677.4	chr5	-	3431	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	-95	-1	-50	1	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTATGTGTTGTGTT	NA	False	NA	NA	False	GATAAA	-4	NA	143166580	143157939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
ES.27677.5	chr5	-	7308	3	FSM	ENSMUSG00000061898.11	ENSMUST00000166382.5	3238	3	-4071	1	-30	-1	multi-exon	FALSE	canonical	3	29	junction_1	4.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGTTTATGTGTTGT	NA	False	NA	NA	False	GATAAA	-1	NA	143166560	143157942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143160814_143161790_143161887_143162219
ES.27677.6	chr5	-	3480	5	FSM	ENSMUSG00000061898.11	ENSMUST00000165318.4	3480	5	-2	2	-2	-1	multi-exon	FALSE	canonical	1	1	junction_4	15.5724115023974	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGTTTATGTGTTGT	NA	False	NA	NA	False	GATAAA	-1	NA	143166532	143157942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165398_143166303
ES.27677.7	chr5	-	5694	2	NIC	ENSMUSG00000061898.11	novel	3238	3	NA	NA	-1491	-12	intron_retention	FALSE	canonical	3	38	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATAAACCATGCTGT	1772	False	NA	NA	False	TTTAAA	-5	NA	143163980	143157953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143161887_143162219
ES.27678.1	chr5	-	1435	3	ISM	ENSMUSG00000039296.16	ENSMUST00000085733.9	1819	7	6482	0	6482	0	3prime_fragment	FALSE	canonical	2	3	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGATGGCTTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-34	NA	143205155	143202070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143202965_143204425_143204529_143204717
ES.27678.2	chr5	-	1076	3	NNC	ENSMUSG00000039296.16	novel	1245	6	NA	NA	6551	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGCTACATGATGGCT	NA	False	NA	NA	False	AATAAA	-25	NA	143205086	143202079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143202965_143204425_143204529_143204998
ES.27679.1	chr5	+	4418	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	-28	875	-17	3	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTCCTTAAGCTGT	NA	False	NA	22	True	AATGAA	-14	NA	143220900	143233714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.10	chr5	+	4259	4	FSM	ENSMUSG00000029587.17	ENSMUST00000077485.11	4294	4	37	-2	26	2	multi-exon	FALSE	canonical	3	4	junction_3	16.391054470859	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGTGTATGCTTCC	NA	False	NA	13	True	AATGAA	-5	NA	143220954	143233705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143229816
ES.27679.11	chr5	+	5222	4	NIC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	33	2	intron_retention	FALSE	canonical	3	41	junction_1	5.43650214343336	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGTGTATGCTTCC	NA	False	NA	13	True	AATGAA	-5	NA	143220961	143233705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.12	chr5	+	3097	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	33	2135	33	-1249	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAGTAATACT	NA	False	NA	NA	False	NA	NA	NA	143220961	143232454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.13	chr5	+	4406	5	NNC	ENSMUSG00000029587.17	novel	4384	5	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.5695048308141	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTGTGTATGCTTCC	NA	False	NA	13	True	AATGAA	-5	NA	143220963	143233705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226175_143229830
ES.27679.14	chr5	+	5100	5	NNC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	17	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4519812604803	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACCTTGTAAATTGTG	NA	False	NA	NA	False	TATAAA	-45	NA	143221018	143234509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143221140_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.15	chr5	+	4266	5	NNC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	19	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.2837966537928	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGCTGTCATCAGCCTG	NA	False	NA	32	True	AATGAA	-24	NA	143221020	143233724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143221135_143222008_143222072_143225750_143225836_143226074_143226171_143229816
ES.27679.16	chr5	+	3608	1	ISM	ENSMUSG00000029587.17	ENSMUST00000077485.11	4294	4	8942	236	4066	-236	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTGTCTGGACTGTGG	NA	False	NA	NA	False	ACTAAA	-19	NA	143229859	143233467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143229900_143233500
ES.27679.2	chr5	+	4483	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-99	0	-15	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTTCCTTAAGC	NA	False	NA	19	True	AATGAA	-11	NA	143220902	143233711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
ES.27679.3	chr5	+	3584	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	4	1677	4	-791	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGAAGTCTGTAAAGG	NA	False	NA	NA	False	AATAGA	-27	NA	143220932	143232912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.4	chr5	+	4280	5	NNC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.6079474960511	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTTCCTTAAGC	NA	False	NA	19	True	AATGAA	-11	NA	143220932	143233711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143221032_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.5	chr5	+	6025	4	NIC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	5	-109	intron_retention	FALSE	canonical	3	41	junction_1	5.43650214343336	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATGAGACTCAGCACC	NA	False	NA	NA	False	TATAAA	-16	NA	143220933	143234480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.6	chr5	+	3396	4	NIC	ENSMUSG00000029587.17	novel	5265	5	NA	NA	20	1481	intron_retention	FALSE	canonical	3	41	junction_1	5.43650214343336	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATATGGTACTAAGCGT	NA	False	NA	NA	False	NA	NA	NA	143220948	143231866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143222072_143225708_143225836_143226074_143226171_143229816
ES.27679.7	chr5	+	3171	4	ISM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	20	5720	20	-1516	5prime_fragment	FALSE	canonical	3	36	junction_1	5.79271573232759	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATGTGTTTTGTGTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	143220948	143228869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074
ES.27679.8	chr5	+	3013	4	FSM	ENSMUSG00000029587.17	ENSMUST00000077485.11	4294	4	32	1249	21	-1249	multi-exon	FALSE	canonical	3	4	junction_3	16.391054470859	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAGTAATACT	NA	False	NA	NA	False	NA	NA	NA	143220949	143232454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143229816
ES.27679.9	chr5	+	5312	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	-51	-877	22	-1	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTGAAATGATATCTA	NA	False	NA	NA	False	NA	NA	NA	143220950	143234588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
ES.2768.1	chr10	-	174	1	Intergenic	novelGene_2112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAATTGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52206189	52206015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52206000_52206200
ES.27680.1	chr5	-	4880	7	FSM	ENSMUSG00000046658.17	ENSMUST00000161448.8	6891	7	-13	2024	-13	-1432	multi-exon	TRUE	canonical	0	0	junction_2	2.98607881119482	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGACTGGACTCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	143255790	143237475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143241321_143248547_143248662_143249050_143249178_143249805_143249898_143250047_143250437_143250760_143250889_143255605
ES.27681.1	chr5	-	5552	1	Genic_Genomic	ENSMUSG00000039244.11	novel	NA	NA	NA	NA	8441	123	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGGATTTCATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	143292378	143286826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_143286800_143292400
ES.27681.10	chr5	-	5298	5	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	167	junction_4	48.7493589701444	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5285	False	NA	-14	True	AATACA	-25	NA	143314995	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143311979_143314145_143314326_143314920
ES.27681.11	chr5	-	1299	10	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	110.679718105893	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5318	False	NA	-14	True	AATACA	-25	NA	143314962	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306046_143306151_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311087_143311179_143311853_143311979_143314145_143314326_143314920
ES.27681.12	chr5	-	1621	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_8	100.752171192486	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5298	False	NA	-14	True	AATACA	-25	NA	143314982	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314853
ES.27681.13	chr5	-	1160	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.7736911130773	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5306	False	NA	-14	True	AATACA	-25	NA	143314974	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143306151_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ES.27681.14	chr5	-	1565	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_8	94.7198995723707	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5287	False	NA	-14	True	AATACA	-25	NA	143314993	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314432_143314653_143314920
ES.27681.15	chr5	-	1490	9	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	111.939087788851	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5306	False	NA	-14	True	AATACA	-25	NA	143314974	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314432_143314653_143314920
ES.27681.16	chr5	-	3108	6	NIC	ENSMUSG00000001844.11	novel	1341	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_5	97.638107314716	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5305	False	NA	-14	True	AATACA	-25	NA	143314975	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143311979_143314145_143314326_143314853
ES.27681.17	chr5	-	1282	7	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	70	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	96.5046055320102	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	6026	False	NA	-15	True	AATACA	-24	NA	143314254	143302245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143312061_143314145
ES.27681.18	chr5	-	1438	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	107.781146357812	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5348	False	NA	-15	True	AATACA	-24	NA	143314932	143302245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314853
ES.27681.19	chr5	-	1901	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_4	103.184202239668	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5306	False	NA	-15	True	AATACA	-24	NA	143314974	143302245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143310714_143311853_143311979_143314145_143314326_143314432
ES.27681.2	chr5	-	7967	11	Fusion	ENSMUSG00000039244.11_ENSMUSG00000001844.11	novel	2208	6	NA	NA	-250	5	intron_retention	TRUE	non_canonical	0	0	junction_10	82.4585350342825	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGGTTTTCATTTTG	5706	False	NA	0	True	AATAAA	-24	NA	143314574	143286956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143312597_143312799
ES.27681.20	chr5	-	3542	6	NIC	ENSMUSG00000001844.11	novel	1341	8	NA	NA	0	-1	intron_retention	TRUE	canonical	3	40	junction_2	107.31523656965	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTGTTTTCTCATCAT	5305	False	NA	-15	True	AATACA	-24	NA	143314975	143302245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143311979_143314145_143314326_143314432
ES.27681.21	chr5	-	3634	5	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	192	junction_4	36.5581728208618	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATTTGTTTTCTCATCA	5305	False	NA	-16	True	AATACA	-23	NA	143314975	143302246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143311979_143314145
ES.27681.22	chr5	-	3317	7	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	6	junction_6	111.634323674317	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTGTTTTCTCATC	5313	False	NA	-17	True	AATACA	-22	NA	143314967	143302247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143311979_143314145_143314326_143314432_143314653_143314853
ES.27681.23	chr5	-	4050	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-2	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	114.186385406689	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATATTTGTTTTCTCATC	5309	False	NA	-17	True	AATACA	-22	NA	143314971	143302247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311087_143312597_143312799_143314326_143314920
ES.27681.24	chr5	-	2796	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	11	3	intron_retention	FALSE	canonical	3	6	junction_7	116.938323181801	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTTGTTTTCTCAT	5347	False	NA	-18	True	AATACA	-21	NA	143314933	143302248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310154_143310639_143311979_143314145_143314326_143314432_143314653_143314853
ES.27681.25	chr5	-	1326	8	FSM	ENSMUSG00000001844.11	ENSMUST00000159813.8	1341	8	11	4	2	3	multi-exon	FALSE	canonical	3	40	junction_2	78.3753397284568	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTTGTTTTCTCAT	5316	False	NA	-18	True	AATACA	-21	NA	143314964	143302248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ES.27681.26	chr5	-	1397	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.937194955028	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTTGTTTTCTCAT	5315	False	NA	-18	True	AATACA	-21	NA	143314965	143302248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311836_143311979_143314145_143314326_143314853
ES.27681.27	chr5	-	1283	8	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	87.5293536769354	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGATATTTGTTTTCTC	5287	False	NA	-20	True	AATACA	-19	NA	143314993	143302250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314201_143314326_143314920
ES.27681.28	chr5	-	7235	5	NNC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_3	112.037940002483	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGGATATTTGTTTTCT	5305	False	NA	-21	True	AATACA	-18	NA	143314975	143302251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143302588_143305985_143306231_143307523_143312592_143312794_143314326_143314920
ES.27681.29	chr5	-	1409	9	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	104.937406938613	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGATATTTGTTTTC	5306	False	NA	-22	True	AATACA	-17	NA	143314974	143302252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311087_143311179_143311853_143311979_143314145_143314326_143314920
ES.27681.3	chr5	-	7438	4	NIC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	12	-1	intron_retention	FALSE	canonical	3	130	junction_2	6.79869268479038	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGGCATTGTGGGGTTT	NA	False	NA	-8	True	AATAAA	-16	NA	143301083	143286964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143292561_143293370_143293896_143297465_143297632_143299932
ES.27681.30	chr5	-	1392	8	NIC	ENSMUSG00000001844.11	novel	1341	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	101.62174763227	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGATATTTGTTTTC	5313	False	NA	-22	True	AATACA	-17	NA	143314967	143302252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
ES.27681.31	chr5	-	2477	7	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	167	junction_6	43.0764823695405	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGATATTTGTTTTC	5287	False	NA	-22	True	AATACA	-17	NA	143314993	143302252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143311979_143314145_143314326_143314920
ES.27681.4	chr5	-	2265	6	NNC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	52.428999608995	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGGCATTGTGGGGTT	NA	False	NA	-9	True	AATAAA	-15	NA	143301127	143286965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300608
ES.27681.5	chr5	-	6889	5	NIC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	56	-3	intron_retention	FALSE	canonical	3	130	junction_2	6.75925291729789	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGGCATTGTGGGGT	NA	False	NA	-10	True	AATAAA	-14	NA	143301039	143286966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
ES.27681.6	chr5	-	1091	2	ISM	ENSMUSG00000039244.11	ENSMUST00000162332.2	944	4	41	5403	41	-5403	5prime_fragment	FALSE	canonical	3	147	junction_1	0	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTTTAGTATTACTGT	NA	False	NA	NA	False	NA	NA	NA	143301054	143299460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143300155_143300657
ES.27681.7	chr5	-	1412	8	NIC	ENSMUSG00000001844.11	novel	1364	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.1580146425249	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5287	False	NA	-14	True	AATACA	-25	NA	143314993	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314853
ES.27681.8	chr5	-	1345	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	18	1	-9	0	multi-exon	FALSE	canonical	3	167	junction_7	40.248209492435	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5287	False	NA	-14	True	AATACA	-25	NA	143314993	143302244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ES.27682.1	chr5	+	309	2	ISM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	-61	1777	19	-26	5prime_fragment	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAAGGACTTCGTGGTC	NA	False	NA	NA	False	ATTAAA	-31	NA	143315020	143316679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143315109_143316458
ES.27683.1	chr5	+	4322	24	NNC	ENSMUSG00000010825.18	novel	3825	22	NA	NA	-10663	-37	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.52731896263046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAATGTCCCACCGGAGG	3122	False	NA	NA	False	AATAAA	-16	NA	143332429	143377516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143332518_143339274_143339585_143343286_143343702_143348306_143348462_143358748_143358998_143359185_143359272_143360154_143360225_143361006_143361102_143361304_143361489_143363243_143363399_143365006_143365148_143365854_143365953_143366140_143366259_143367337_143367694_143368268_143368686_143371761_143371850_143372475_143372554_143373072_143373270_143373576_143373733_143373863_143373951_143374403_143374534_143374621_143374741_143376795_143376961_143377151
ES.27683.2	chr5	+	4138	22	FSM	ENSMUSG00000010825.18	ENSMUST00000110733.9	3825	22	13	-326	13	-4	multi-exon	FALSE	canonical	0	0	junction_4	1.4630753805464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGCTGGCTTGCTGCGG	NA	False	NA	NA	False	NA	NA	NA	143343105	143377549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143343702_143348306_143348462_143358748_143358998_143359185_143359272_143360154_143360225_143361006_143361102_143361304_143361489_143363243_143363399_143365006_143365148_143365854_143365953_143366140_143366259_143367337_143367694_143368268_143368686_143371761_143371850_143372475_143372554_143373072_143373270_143373576_143373733_143373863_143373951_143374403_143374534_143374621_143374741_143376795_143376961_143377151
ES.27684.1	chr5	+	1159	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-55	725	-55	-725	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGGTGGTCAATTCTT	NA	False	NA	75	True	NA	NA	NA	143389537	143406931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ES.27684.10	chr5	+	177	1	Intergenic	novelGene_23039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143399239	143399416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143399200_143399400
ES.27684.2	chr5	+	1875	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	-43	-3	-43	3	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	False	NA	NA	False	AATAAA	-18	NA	143389549	143407659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ES.27684.3	chr5	+	1989	6	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	301.58938973379	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATGTATGGTCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	143389580	143407651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143389808_143390973_143391127_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ES.27684.4	chr5	+	1322	1	Genic_Genomic	ENSMUSG00000079111.4	novel	NA	NA	NA	NA	-10	-16752	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTCCTTAATGCT	NA	False	NA	NA	False	NA	NA	NA	143389582	143390904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_143389600_143390900
ES.27684.5	chr5	+	3161	5	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	266.643488576039	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	False	NA	NA	False	AATAAA	-18	NA	143389582	143407659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143391127_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ES.27684.6	chr5	+	1770	6	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	246.673873768585	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATGTATGGTCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	143389586	143407651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555_143407279_143407338
ES.27684.8	chr5	+	292	2	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	7	-16599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGCCCCTTTGACTCT	NA	False	NA	NA	False	NA	NA	NA	143389599	143391057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143389808_143390973
ES.27685.1	chr5	+	3872	1	Intergenic	novelGene_23040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCAGTGTTCGTGTGG	1288	False	NA	NA	False	NA	NA	NA	143408353	143412225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143408400_143412200
ES.27686.1	chr5	-	157	1	Intergenic	novelGene_23041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	143422725	143422568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143422600_143422700
ES.27687.1	chr5	+	181	1	Intergenic	novelGene_23042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACTGCATGTAGG	4284	False	NA	NA	False	NA	NA	NA	143425602	143425783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143425600_143425800
ES.27688.1	chr5	-	326	1	Intergenic	novelGene_23043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACCAGTAACTACT	NA	False	NA	NA	False	NA	NA	NA	143432339	143432013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143432000_143432300
ES.27688.2	chr5	-	176	1	Intergenic	novelGene_23044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTTTGGGGTTAT	NA	False	NA	NA	False	NA	NA	NA	143432340	143432164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143432200_143432300
ES.27689.1	chr5	+	2929	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	-18	1740	-18	-1740	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAAGGTGTGGGATTCC	NA	False	NA	NA	False	AATAAA	-35	NA	143450320	143489957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.27689.2	chr5	+	2438	13	NIC	ENSMUSG00000039206.14	novel	4651	15	NA	NA	1	-1752	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.40138877408571	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAAGCCTGCAAGGAAG	NA	False	NA	NA	False	AATAAA	-23	NA	143450368	143489945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143450532_143452707_143452860_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.27689.3	chr5	+	2274	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	30	2347	1	-2347	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTTTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	143450368	143489350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.27689.4	chr5	+	2951	16	NNC	ENSMUSG00000039206.14	novel	4651	15	NA	NA	40	-1752	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4285931724061	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAAGCCTGCAAGGAAG	NA	False	NA	NA	False	AATAAA	-23	NA	143450407	143489945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143450532_143451241_143451363_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.27689.5	chr5	+	2692	14	NIC	ENSMUSG00000039206.14	novel	4651	15	NA	NA	52	-1751	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	9.11919751478218	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCCTGCAAGGAAGG	NA	False	NA	NA	False	AATAAA	-24	NA	143450419	143489946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.27689.6	chr5	+	2158	12	ISM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	10055	1950	1722	-1950	3prime_fragment	FALSE	canonical	3	16	junction_1	4.91413881881439	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTGCCTGCGTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	143460393	143489747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ES.2769.1	chr10	+	175	1	Intergenic	novelGene_2116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTTGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	52251180	52251355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_52251200_52251400
ES.27690.1	chr5	-	6075	1	Genic_Genomic	ENSMUSG00000001847.15	novel	NA	NA	NA	NA	7929	29	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTTGTATAAATTGT	NA	False	NA	NA	False	NA	NA	NA	143495434	143489359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_143489400_143495400
ES.27690.10	chr5	-	1581	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	22	2556	-21	-708	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCTGTCAAACAGTA	3445	False	NA	8	True	AATAAA	-28	NA	143513769	143491944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.11	chr5	-	4104	3	ISM	ENSMUSG00000001847.15	ENSMUST00000145709.8	585	6	7044	-855	6470	-723	3prime_fragment	FALSE	canonical	3	1230	junction_2	36	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTTTAACGGTTAAT	9703	False	NA	-7	True	AATAAA	-13	NA	143496893	143491959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143492861_143493081_143493242_143493850
ES.27690.12	chr5	-	1197	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	-93	3055	-93	371	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTTGCGTTGTGCTG	3330	False	NA	-4	True	ATTAAA	-21	NA	143513884	143492443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.13	chr5	-	7513	5	NIC	ENSMUSG00000001847.15	novel	2325	7	NA	NA	-12	301	intron_retention	FALSE	canonical	3	1143	junction_3	62.5594717049305	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTTAAAGCCTTATTT	3454	False	NA	3	True	ATTAAA	-22	NA	143513760	143492513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143492861_143493081_143493242_143493850_143500542_143502912_143502985_143513517
ES.27690.14	chr5	-	850	5	NIC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	12	290	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	533.751580793912	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGACAAAGCCTTCTTA	3478	False	NA	-8	True	ATTAAA	-11	NA	143513736	143492524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143492861_143493081_143493242_143493850_143493914_143502912_143502985_143513517
ES.27690.16	chr5	-	686	4	NNC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	7764	290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	597.521547728615	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGACAAAGCCTTCTTA	NA	False	NA	-8	True	ATTAAA	-11	NA	143495599	143492524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143492861_143493081_143493242_143493850_143493914_143495472
ES.27690.17	chr5	-	901	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	45	3213	2	213	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACCAGTCAATAATTT	3468	False	NA	70	True	CATAAA	-14	NA	143513746	143492601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.18	chr5	-	177	1	Intergenic	novelGene_23045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAAGCTCCTTTTG	4416	False	NA	NA	False	NA	NA	NA	143502180	143502003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143502000_143502200
ES.27690.2	chr5	-	4366	5	NIC	ENSMUSG00000001847.15	novel	2325	7	NA	NA	0	29	intron_retention	FALSE	canonical	3	1143	junction_3	33.1398551596111	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTTGTATAAATTGT	3466	False	NA	NA	False	NA	NA	NA	143513748	143489359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.3	chr5	-	2513	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	-194	1840	-194	8	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTTGTGTTTTTGGAA	3229	False	NA	-1	True	AATAAA	-21	NA	143513985	143491228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.4	chr5	-	8859	1	NIC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	3269	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGTTATGCTTGTGTT	6502	False	NA	-8	True	AATAAA	-14	NA	143500094	143491235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143491200_143500100
ES.27690.6	chr5	-	2131	5	NIC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	533.751580793912	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACTGGTTATGCTTGTG	3484	False	NA	-10	True	AATAAA	-12	NA	143513730	143491237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143492861_143493081_143493242_143493850_143493914_143502912_143502985_143513517
ES.27690.7	chr5	-	1855	8	NNC	ENSMUSG00000001847.15	novel	2325	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	547.065082126096	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAACTGGTTATGCTTGT	3459	False	NA	-11	True	AATAAA	-11	NA	143513755	143491238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143492014_143492121_143492213_143492522_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ES.27690.8	chr5	-	2380	6	NNC	ENSMUSG00000001847.15	novel	4159	6	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	491.102596205722	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAACTGGTTATGCTTGT	3497	False	NA	-11	True	AATAAA	-11	NA	143513717	143491238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500687_143502912_143502985_143513517
ES.27691.1	chr5	+	2198	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534460	143550280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143534890_143548511
ES.27691.11	chr5	+	3881	12	NIC	ENSMUSG00000018001.19	novel	3738	13	NA	NA	22	0	intron_retention	FALSE	canonical	3	61	junction_11	7.17894073541805	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608223	143696005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.12	chr5	+	3780	14	NIC	ENSMUSG00000018001.19	novel	3738	13	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	25.5722667826371	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608242	143696005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143608429_143636281_143636365_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.15	chr5	+	3088	7	ISM	ENSMUSG00000018001.19	ENSMUST00000110727.2	2068	13	50076	-1984	50076	-10	3prime_fragment	FALSE	canonical	3	61	junction_6	5.1234753829798	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAAACTGCCTAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	143687071	143695995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.2	chr5	+	965	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	-26	-20	12	20	multi-exon	TRUE	canonical	3	93	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATCTGTTTGTAGGACAG	NA	False	NA	29	True	AATAAA	-34	NA	143534474	143537713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143534890_143537163
ES.27691.3	chr5	+	3216	1	FSM	ENSMUSG00000083012.10	ENSMUST00000198982.2	2114	1	-40	-1062	14	4	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCGGTGTTTTCCTAAT	NA	False	NA	8	True	AATAAA	-13	NA	143534476	143537692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143534500_143537700
ES.27691.4	chr5	+	3923	13	Fusion	ENSMUSG00000018001.19_ENSMUSG00000118332.2	novel	2331	3	NA	NA	15	0	multi-exon	FALSE	canonical	0	0	junction_1	20.4984755530747	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143534477	143696005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_143534890_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.5	chr5	+	1981	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	32	185	-8	-185	multi-exon	FALSE	canonical	3	103	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGACATTTTACAGCC	NA	False	NA	NA	False	AATAAA	-11	NA	143534492	143550095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143534890_143548511
ES.27691.6	chr5	+	2276	3	FSM	ENSMUSG00000118332.2	ENSMUST00000101434.5	2276	3	-22	22	-7	-22	multi-exon	FALSE	canonical	0	0	junction_2	46.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATGTTTTATTTTG	NA	False	NA	4	True	AATAAA	-17	NA	143534493	143550258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143534890_143537163_143537297_143548511
ES.27691.7	chr5	+	3538	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	-2	202	-2	-202	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGTATTAATTTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	143608199	143695803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.8	chr5	+	3738	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608201	143696005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ES.27691.9	chr5	+	4010	12	ISM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	1	10	1	-10	intron_retention	FALSE	canonical	3	62	junction_1	6.88632613251114	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAAACTGCCTAAGA	NA	False	NA	-5	True	AATAAA	-12	NA	143608202	143695995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149
ES.27692.1	chr5	-	1019	1	Intergenic	novelGene_23046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAACCTCCCAAGGAA	NA	False	NA	NA	False	AAAACA	-36	NA	143593797	143592778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143592800_143593800
ES.27693.1	chr5	-	5414	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	-246	-17	-246	17	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTCTCCGCAAGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	143718281	143696062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.11	chr5	-	5092	18	NNC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	69	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	25.5344261814364	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCGTCTCAGTTTTA	NA	False	NA	NA	False	TATAAA	-13	NA	143717966	143696082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143697098_143697704_143697744_143699290_143699606_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.13	chr5	-	3827	8	NNC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	-2406	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	34.1819859467718	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAACCGTCTCAGTTTT	NA	False	NA	NA	False	TATAAA	-12	NA	143705348	143696083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701800_143702359_143702427_143702528_143703237_143703678_143703833_143705248
ES.27693.14	chr5	-	5349	17	NNC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	-224	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	26.6736644464161	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACAACCGTCTCAGTT	NA	False	NA	NA	False	TATAAA	-10	NA	143718259	143696085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143697098_143699271_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.15	chr5	-	6166	17	NIC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	67	-8	intron_retention	FALSE	canonical	3	67	junction_4	10.5623150871388	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAACAACCGTCTCAG	NA	False	NA	NA	False	TATAAA	-8	NA	143717968	143696087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143713782_143717917
ES.27693.17	chr5	-	3990	13	ISM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	8281	2743	-1054	685	internal_fragment	FALSE	canonical	3	67	junction_2	11.9849442588979	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTATGTGCACATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	143709754	143698822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649
ES.27693.2	chr5	-	6637	17	NIC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	61	0	intron_retention	FALSE	canonical	3	67	junction_3	13.7191415092199	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143717974	143696079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143697098_143697704_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.3	chr5	-	5499	17	NIC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	61	0	intron_retention	FALSE	canonical	3	67	junction_4	13.7225578428367	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143717974	143696079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.4	chr5	-	4810	18	NNC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_1	25.3677450978498	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143718035	143696079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143696757_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.5	chr5	-	5893	17	NIC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	-246	0	intron_retention	FALSE	canonical	3	74	junction_12	11.7147076361299	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143718281	143696079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.7	chr5	-	4787	2	ISM	ENSMUSG00000051306.8	ENSMUST00000141225.2	654	3	-265	-3425	-265	-3	intron_retention	FALSE	canonical	3	110	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCGTCTCAGTTTTA	NA	False	NA	NA	False	TATAAA	-13	NA	143701633	143696082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143699593_143700356
ES.27693.8	chr5	-	5202	17	NIC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	-122	-3	intron_retention	FALSE	canonical	0	0	junction_12	26.4657059937951	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCGTCTCAGTTTTA	NA	False	NA	NA	False	TATAAA	-13	NA	143718157	143696082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27693.9	chr5	-	5195	18	NNC	ENSMUSG00000051306.8	novel	5151	18	NA	NA	-205	-3	intron_retention	FALSE	canonical	2	7	junction_1	24.5717648185387	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCGTCTCAGTTTTA	NA	False	NA	NA	False	TATAAA	-13	NA	143718240	143696082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143696940_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ES.27694.1	chr5	+	2854	1	FSM	ENSMUSG00000097287.4	ENSMUST00000196629.2	2265	1	-2035	1446	172	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCGCTTCAGCCTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	143750030	143752884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143750000_143752900
ES.27695.1	chr5	-	211	1	Intergenic	novelGene_23047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGTGCCGAAACCCGG	NA	False	NA	NA	False	NA	NA	NA	143784192	143783981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143784000_143784200
ES.27696.1	chr5	-	211	1	Intergenic	novelGene_23048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAGCAGTAAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	143799115	143798904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143798900_143799100
ES.27697.1	chr5	+	3376	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	5	944	5	-944	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCTTTAGGTTTTCTG	NA	False	NA	NA	False	AAAACA	-23	NA	143803547	143840125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.10	chr5	+	4221	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-17	-1534	intron_retention	FALSE	canonical	3	166	junction_1	20.15149722072	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803568	143839535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143836066_143838602
ES.27697.11	chr5	+	3874	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	26	425	-17	-425	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGCCCTTTCCGCTTTTG	NA	False	NA	NA	False	AAAAAG	-13	NA	143803568	143840644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.12	chr5	+	3117	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-16	-947	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	58.0289664456085	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGAGCCTTTAGGTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	143803569	143840122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143838602
ES.27697.13	chr5	+	2578	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	30	1717	-13	-1717	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTATAGTCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	143803572	143839352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.14	chr5	+	5750	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	166	junction_1	20.15149722072	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGACACTGTTGGTGT	NA	False	NA	NA	False	AATAAA	-30	NA	143803572	143841068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143836066_143838602
ES.27697.17	chr5	+	4251	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.129784042788	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAAGACACTGTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	143803574	143841065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.18	chr5	+	2771	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-11	-1535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.3620794886771	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGGACAAGTCCCT	NA	False	NA	19	True	AATAAA	-24	NA	143803574	143839534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823793_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.19	chr5	+	3574	14	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	25	-2131	intron_retention	FALSE	canonical	2	5	junction_1	57.2486531197343	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTTTGATTCCTCAA	NA	False	NA	NA	False	ACTAAA	-24	NA	143803610	143838938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143803756_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143836066_143838602
ES.27697.2	chr5	+	2785	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	5	1535	5	-1535	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGGACAAGTCCCT	NA	False	NA	19	True	AATAAA	-24	NA	143803547	143839534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.20	chr5	+	2673	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	29	-1542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.129784042788	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTACTTTATTGGACA	NA	False	NA	12	True	AATAAA	-17	NA	143803614	143839527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.21	chr5	+	2627	14	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	29	-1536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.2730768285815	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATTGGACAAGTCCC	NA	False	NA	18	True	AATAAA	-23	NA	143803614	143839533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143803764_143808680_143808840_143810620_143810703_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.22	chr5	+	3909	10	NNC	ENSMUSG00000029613.16	novel	1654	6	NA	NA	13208	-1544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1552331260714	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGGTACTTTATTGGA	NA	False	NA	10	True	AATAAA	-15	NA	143816909	143839525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143818396_143818595_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.23	chr5	+	3685	2	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	29602	-1544	intron_retention	FALSE	canonical	3	192	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATGGTACTTTATTGGA	NA	False	NA	10	True	AATAAA	-15	NA	143833303	143839525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143836066_143838602
ES.27697.24	chr5	+	5455	1	Genic_Genomic	ENSMUSG00000029613.16	novel	NA	NA	NA	NA	31922	9	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGGTGTTCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	143835623	143841078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_143835600_143841100
ES.27697.3	chr5	+	2548	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	8	-1535	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	58.0289664456085	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGGACAAGTCCCT	NA	False	NA	19	True	AATAAA	-24	NA	143803550	143839534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143838602
ES.27697.4	chr5	+	2774	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	8	-1535	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	55.6278175163528	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTGGACAAGTCCCT	NA	False	NA	19	True	AATAAA	-24	NA	143803550	143839534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143803756_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.6	chr5	+	4325	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	8	-8	8	8	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGGTGTTCCTTGTTT	NA	False	NA	NA	False	AATAAA	-39	NA	143803550	143841077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.7	chr5	+	2175	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	10	-2132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.4952356923594	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGTTTTGATTCCTCA	NA	False	NA	NA	False	ACTAAA	-23	NA	143803552	143838937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816256_143816334_143818970_143819071_143820794_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27697.9	chr5	+	4624	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	-18	-1545	intron_retention	FALSE	canonical	3	166	junction_1	20.2604345239827	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATGGTACTTTATTGG	NA	False	NA	9	True	AATAAA	-14	NA	143803567	143839524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ES.27698.1	chr5	-	1037	1	Intergenic	novelGene_23049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAACCCTG	NA	False	NA	NA	False	AATGAA	-8	NA	143805698	143804661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143804700_143805700
ES.27699.1	chr5	-	1787	5	Fusion	ENSMUSG00000029607.15_ENSMUSG00000029610.14	novel	1185	4	NA	NA	-25	5435	intron_retention	FALSE	canonical	0	0	junction_1	282.526989861146	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTGGTCCAGTCTGC	NA	False	NA	NA	False	NA	NA	NA	143846631	143834086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_143834694_143839500_143840009_143841382_143841615_143843366_143843574_143846398
ES.27699.2	chr5	-	1185	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846657	143839521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ES.27699.3	chr5	-	5758	2	ISM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	4	0	4	0	intron_retention	FALSE	canonical	3	571	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846653	143839521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143840009_143841382
ES.27699.4	chr5	-	2920	3	NIC	ENSMUSG00000029610.14	novel	1185	4	NA	NA	16	-1	intron_retention	FALSE	canonical	3	560	junction_2	5.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTTTATTTTATTTTA	NA	False	NA	-19	True	AATAAA	-15	NA	143846641	143839522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143840009_143841382_143843574_143846398
ES.27699.5	chr5	-	1047	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	25	1	17	-1	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTTTATTTTATTTTA	NA	False	NA	-19	True	AATAAA	-15	NA	143846640	143839522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ES.27699.6	chr5	-	7101	1	NIC	ENSMUSG00000029610.14	novel	1185	4	NA	NA	-17	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTTTATTTTATTTTA	NA	False	NA	-19	True	AATAAA	-15	NA	143846623	143839522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143839500_143846600
ES.27699.7	chr5	-	3738	2	NIC	ENSMUSG00000029610.14	novel	1185	4	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	2	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTATTTTATTTT	NA	False	NA	-20	True	AATAAA	-14	NA	143846619	143839523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143840009_143843366
ES.27699.8	chr5	-	926	4	NNC	ENSMUSG00000029610.14	novel	1073	4	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	320.793114362235	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTATTTTATTTT	NA	False	NA	-20	True	AATAAA	-14	NA	143846635	143839523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143840009_143841382_143841615_143843366_143843459_143846518
ES.27699.9	chr5	-	1112	4	NNC	ENSMUSG00000029610.14	novel	1185	4	NA	NA	280	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	320.793114362235	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTATTTTATTTT	NA	False	NA	-20	True	AATAAA	-14	NA	143846322	143839523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143840009_143841382_143841615_143843366_143843574_143846134
ES.277.1	chr1	-	1755	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTATACAAAAAGAAATACT	4781	False	NA	NA	False	NA	NA	NA	36530960	36529205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36529200_36531000
ES.2770.1	chr10	-	4333	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-90	-27	-41	-1	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTGTGACTTGTATCA	NA	False	NA	0	True	ATTAAA	-28	NA	52258261	52213120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.11	chr10	-	4024	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-45	237	-1	-229	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAACCTGTCCATGGTGC	NA	False	NA	NA	False	ATTAAA	-13	NA	52258216	52213384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.12	chr10	-	3221	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-95	1090	-46	-1082	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTTTTCCTCAAGTA	NA	False	NA	24	True	AAGAAA	-1	NA	52258266	52214237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.14	chr10	-	3154	8	NNC	ENSMUSG00000019861.16	novel	4216	8	NA	NA	-24	-1120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.4384671260076	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGCTCCTGATAGGC	NA	False	NA	-14	True	AATAAA	-14	NA	52258244	52214275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230837_52234868_52235034_52257706
ES.2770.15	chr10	-	2958	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-46	1304	-2	-1296	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTATGGTCTCTGGG	NA	False	NA	NA	False	TATAAA	-18	NA	52258217	52214451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.17	chr10	-	2286	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-57	1987	-8	-1979	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGCCTGTTTTCAAT	NA	False	NA	NA	False	TTTAAA	-18	NA	52258228	52215134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.18	chr10	-	1761	1	Intergenic	novelGene_2113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGCTTCCTAAGATGA	NA	False	NA	NA	False	NA	NA	NA	52239129	52237368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52237400_52239100
ES.2770.19	chr10	-	1633	1	Intergenic	novelGene_2114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATTTCGTCCACCTT	NA	False	NA	NA	False	NA	NA	NA	52244178	52242545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52242500_52244200
ES.2770.2	chr10	-	4323	9	FSM	ENSMUSG00000019861.16	ENSMUST00000217753.2	3875	9	-440	-8	-34	0	multi-exon	FALSE	canonical	0	0	junction_6	57.8325978579555	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTTATTATGGGT	NA	False	NA	-27	True	AATAAA	-26	NA	52258254	52213147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52233437_52233462_52234868_52235034_52257706
ES.2770.20	chr10	-	5171	1	Intergenic	novelGene_2115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52253489	52248318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52248300_52253500
ES.2770.3	chr10	-	4846	6	ISM	ENSMUSG00000019861.16	ENSMUST00000217753.2	3875	9	25708	-5	-5610	-3	3prime_fragment	FALSE	canonical	3	117	junction_5	14.6751490622753	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTGGTTTATTATG	NA	False	NA	-30	True	AATAAA	-23	NA	52232106	52213150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667
ES.2770.6	chr10	-	5167	8	NNC	ENSMUSG00000019861.16	novel	4216	8	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.3280903247223	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAATATTTTGGTTTAT	NA	False	NA	-34	True	AATAAA	-19	NA	52258240	52213154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_52216378_52221683_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ES.2770.8	chr10	-	3984	7	NIC	ENSMUSG00000019861.16	novel	4216	8	NA	NA	46	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	50.4700130990891	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTAAATATTTTGGTT	NA	False	NA	-37	True	AATAAA	-16	NA	52258125	52213157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52234868_52235034_52257706
ES.2770.9	chr10	-	4212	8	NNC	ENSMUSG00000019861.16	novel	4216	8	NA	NA	7	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.0345075232981	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATAAATGTTTTCTCT	NA	False	NA	-62	True	AATAAA	-43	NA	52258208	52213182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235028_52257706
ES.27700.10	chr5	+	5169	13	NNC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	8	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	39.1514154703675	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTTACCATGTCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	143846829	143868253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143858920_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.11	chr5	+	2763	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.7468032696655	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGCAGTTACTGT	NA	False	NA	NA	False	AAAAAG	-20	NA	143846837	143868263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.14	chr5	+	2418	11	FSM	ENSMUSG00000079109.12	ENSMUST00000126331.2	2826	11	-4	412	-4	-412	multi-exon	FALSE	canonical	3	72	junction_4	12.2723265927859	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATTGGTCATTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	143846838	143863276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ES.27700.15	chr5	+	3242	15	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-4	312	combination_of_known_splicesites	FALSE	canonical	2	6	junction_12	29.6903234425368	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCAGCTCTCAATCCC	NA	False	NA	1	True	ATTAAA	-18	NA	143846838	143868572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865116_143865759_143865861_143865998_143866169_143867833
ES.27700.16	chr5	+	1567	1	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-4	-1873	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGTTGAAAAGTTATTC	NA	False	NA	NA	False	NA	NA	NA	143846838	143848405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846800_143848400
ES.27700.17	chr5	+	2810	14	NIC	ENSMUSG00000079109.12	novel	5477	15	NA	NA	-3	-29	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	41.5541280997469	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	143846839	143868231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862892_143864916_143865116_143865759_143865861_143865998_143866169_143867833
ES.27700.18	chr5	+	4783	13	NIC	ENSMUSG00000079109.12	novel	6157	14	NA	NA	-3	312	intron_retention	FALSE	canonical	3	76	junction_5	18.2777566700317	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCAGCTCTCAATCCC	NA	False	NA	1	True	ATTAAA	-18	NA	143846839	143868572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865861_143865998_143866169_143867833
ES.27700.19	chr5	+	3836	13	NNC	ENSMUSG00000079109.12	novel	5477	15	NA	NA	-3	0	intron_retention	FALSE	canonical	2	5	junction_9	43.1219201798807	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846839	143868260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143863022_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.2	chr5	+	6921	11	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	2	-2	intron_retention	FALSE	canonical	2	8	junction_5	33.7889035039612	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACCATGTCTGCAGTT	NA	False	NA	NA	False	AAAAAG	-15	NA	143846809	143868258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.20	chr5	+	5304	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	72	junction_4	18.9689874586679	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCATGTCTGCAGTTA	NA	False	NA	NA	False	AAAAAG	-16	NA	143846839	143868259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.23	chr5	+	3743	13	NNC	ENSMUSG00000079109.12	novel	6157	14	NA	NA	1	312	intron_retention	FALSE	canonical	1	3	junction_4	39.5750868602963	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGCAGCTCTCAATCCC	NA	False	NA	1	True	ATTAAA	-18	NA	143846843	143868572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850487_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862892_143864916_143865861_143865998_143866169_143867833
ES.27700.24	chr5	+	4344	12	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	1	-690	intron_retention	FALSE	canonical	3	15	junction_1	28.390430234951	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143846843	143867287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998
ES.27700.25	chr5	+	4965	10	NIC	ENSMUSG00000079109.12	novel	6157	14	NA	NA	1	-659	intron_retention	FALSE	canonical	2	8	junction_6	39.6007856263259	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAATCACACCACAAGCG	NA	False	NA	NA	False	NA	NA	NA	143846843	143867318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862892_143864916_143865861_143865998
ES.27700.26	chr5	+	2594	15	NNC	ENSMUSG00000079109.12	novel	5477	15	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.4584252041508	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGCAGTTACTGT	NA	False	NA	NA	False	AAAAAG	-20	NA	143846845	143868263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862320_143862530_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.27	chr5	+	2696	14	NNC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	37.0935168740151	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCATGTCTGCAGTTA	NA	False	NA	NA	False	AAAAAG	-16	NA	143846847	143868259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143850219_143850307_143850436_143850487_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.28	chr5	+	3151	15	NNC	ENSMUSG00000079109.12	novel	5477	15	NA	NA	6	316	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	35.8802572056397	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTCTCAATCCCGACT	NA	False	NA	5	True	ATTAAA	-22	NA	143846848	143868576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853222_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.29	chr5	+	3222	10	NIC	ENSMUSG00000079109.12	novel	2826	11	NA	NA	6	487	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	27.9404127862612	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTTTTAAAGATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	143846848	143864175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038
ES.27700.3	chr5	+	2772	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	33	2672	-2	91	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGATGGAGTGTTCCT	NA	False	NA	NA	False	TTTAAA	-15	NA	143846814	143868114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.30	chr5	+	3359	15	NNC	ENSMUSG00000079109.12	novel	5477	15	NA	NA	6	314	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	39.981692238895	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAGCTCTCAATCCCGA	NA	False	NA	3	True	ATTAAA	-20	NA	143846848	143868574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143863022_143864916_143865116_143865759_143865861_143865998_143866169_143867833
ES.27700.31	chr5	+	3306	11	FSM	ENSMUSG00000079109.12	ENSMUST00000126331.2	2826	11	9	-489	9	489	multi-exon	FALSE	canonical	3	72	junction_4	12.2723265927859	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTTAAAGATTTATG	NA	False	NA	NA	False	AATAAA	-20	NA	143846851	143864177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038
ES.27700.32	chr5	+	2649	13	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	37.7587370316093	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACCATGTCTGCAGTT	NA	False	NA	NA	False	AAAAAG	-15	NA	143846861	143868258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.33	chr5	+	2183	10	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-3091	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.2379734500505	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACCATGTCTGCAGTT	NA	False	NA	NA	False	AAAAAG	-15	NA	143853305	143868258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143853342_143854397_143854496_143856326_143856427_143858842_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.34	chr5	+	5069	1	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	5822	-690	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143862218	143867287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143862200_143867300
ES.27700.35	chr5	+	7057	11	Fusion	ENSMUSG00000079109.12_ENSMUSG00000075569.11	novel	1453	10	NA	NA	-3793	-18492	intron_retention	FALSE	canonical	0	0	junction_1	0.8	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTGATCCACTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	143866059	143903854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_143866169_143873802_143874155_143875737_143875814_143878777_143883845_143886083_143886261_143887102_143887278_143895083_143895206_143896497_143896688_143900066_143900147_143900612_143900762_143903294
ES.27700.4	chr5	+	8080	10	NIC	ENSMUSG00000079109.12	novel	6157	14	NA	NA	2	-17	intron_retention	FALSE	canonical	2	8	junction_7	32.3625297733866	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTTGAAGCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	143846818	143868243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143860294_143860451_143862038_143865861_143865998
ES.27700.5	chr5	+	3233	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	37	2212	2	314	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAGCTCTCAATCCCGA	NA	False	NA	3	True	ATTAAA	-20	NA	143846818	143868574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.6	chr5	+	2921	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	38	2523	-2	3	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGCAGTTACTGT	NA	False	NA	NA	False	AAAAAG	-20	NA	143846819	143868263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.7	chr5	+	4484	13	NIC	ENSMUSG00000079109.12	novel	6157	14	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	76	junction_5	18.2777566700317	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTTACCATGTCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	143846819	143868253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865861_143865998_143866169_143867833
ES.27700.8	chr5	+	5444	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	38	0	-2	0	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTTATTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	143846819	143870786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27700.9	chr5	+	3818	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	-1	3	intron_retention	FALSE	canonical	3	76	junction_5	17.6618466872059	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGCAGTTACTGT	NA	False	NA	NA	False	AAAAAG	-20	NA	143846820	143868263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ES.27701.1	chr5	-	184	1	Intergenic	novelGene_23050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAGAAGTTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	143849088	143848904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143848900_143849100
ES.27702.1	chr5	-	7586	5	Antisense	novelGene_ENSMUSG00000104633.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGAGCCAGCTCAGGGGT	NA	False	NA	NA	False	NA	NA	NA	143868588	143853578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_143854495_143856324_143856425_143860292_143860449_143862036_143865860_143865997
ES.27703.1	chr5	-	199	1	Intergenic	novelGene_23051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTTTTTTAA	2857	False	NA	NA	False	NA	NA	NA	143906954	143906755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_143906800_143907000
ES.27704.1	chr5	+	3321	2	Antisense	novelGene_ENSMUSG00000029617.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGAATGCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	143929578	143937802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_143930077_143934979
ES.27704.2	chr5	+	3796	1	Antisense	novelGene_ENSMUSG00000029617.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGAATGCTGGTGT	938	False	NA	NA	False	NA	NA	NA	143934006	143937802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_143934000_143937800
ES.27705.1	chr5	-	4861	13	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	726	junction_7	73.7371457724441	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTTTCCTGTTGAGTC	NA	False	NA	-1	True	AATAAA	-20	NA	143951725	143924728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.10	chr5	-	3892	13	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	11	-7	intron_retention	FALSE	canonical	3	726	junction_9	77.3036491161101	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951684	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.12	chr5	-	1713	14	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-9	-7	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	244.685040880658	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951704	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.13	chr5	-	4403	14	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-33	-7	intron_retention	FALSE	canonical	3	726	junction_8	73.5828639686067	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951728	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.14	chr5	-	1815	2	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	22735	7	466	-7	intron_retention	FALSE	canonical	3	901	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143928936	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143925068_143927455
ES.27705.15	chr5	-	1780	15	NNC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	235.72796497104	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951705	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949900_143951522
ES.27705.16	chr5	-	1663	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-54	160	-30	-160	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTACTTGGTCTGATGA	NA	False	NA	-30	True	AGTAAA	-24	NA	143951725	143924886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.17	chr5	-	5668	4	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-4845	-160	intron_retention	FALSE	canonical	3	886	junction_3	38.9044413345772	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTACTTGGTCTGATGA	NA	False	NA	-30	True	AGTAAA	-24	NA	143934247	143924886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143929445_143930043
ES.27705.18	chr5	-	3817	2	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	20579	161	-1690	-161	intron_retention	FALSE	canonical	3	901	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTACTTGGTCTGATG	NA	False	NA	-31	True	AGTAAA	-23	NA	143931092	143924887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143925068_143927455
ES.27705.2	chr5	-	1857	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	-94	6	-70	-6	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTGGTTTCCTGTTG	NA	False	NA	-5	True	AATAAA	-16	NA	143951765	143924732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.20	chr5	-	1264	9	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-10	-5713	intron_retention	FALSE	canonical	3	726	junction_3	82.7117547571081	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCTCCATTTAATTG	NA	False	NA	NA	False	AATACA	-12	NA	143951705	143935008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.21	chr5	-	1909	4	ISM	ENSMUSG00000029617.11	ENSMUST00000197555.2	935	5	1	769	1	-769	5prime_fragment	FALSE	canonical	3	885	junction_2	63.268387753197	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTAGGGTCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	143951694	143946808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.22	chr5	-	3221	3	NIC	ENSMUSG00000029617.11	novel	935	5	NA	NA	-38	-769	intron_retention	FALSE	canonical	3	885	junction_1	15.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTAGGGTCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	143951733	143946808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143949715_143949811_143949910_143951516
ES.27705.3	chr5	-	2076	13	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	1	-7	intron_retention	FALSE	canonical	3	6	junction_7	253.855383152604	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951694	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143940860_143941037_143946020_143946105_143947848_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.5	chr5	-	2693	14	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-29	-7	intron_retention	FALSE	canonical	3	726	junction_8	71.9292880905066	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951724	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.7	chr5	-	1770	14	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-32	-7	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	243.244586772415	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951727	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.8	chr5	-	1893	16	NNC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.014054320999	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951707	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143925068_143926743_143926839_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27705.9	chr5	-	1761	15	NNC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	237.28108062905	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	143951704	143924733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_143925068_143927455_143927584_143928289_143928449_143929360_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ES.27706.1	chr5	+	178	1	Intergenic	novelGene_23052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGTATGATACCATT	NA	False	NA	NA	False	NA	NA	NA	143954168	143954346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143954200_143954300
ES.27707.1	chr5	+	181	1	Intergenic	novelGene_23053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	143966061	143966242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143966100_143966200
ES.27708.1	chr5	+	211	1	Intergenic	novelGene_23054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCTCAGTGCTAGGGT	NA	False	NA	NA	False	NA	NA	NA	143966313	143966524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143966300_143966500
ES.27709.1	chr5	+	173	1	Intergenic	novelGene_23055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	143973202	143973375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_143973200_143973400
ES.2771.1	chr10	+	3707	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	-76	974	-76	-974	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGTATGTGAATGTTAC	NA	False	NA	12	True	AATAAA	-25	NA	52293566	52315305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.10	chr10	+	2311	6	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	12	-2182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.503449240878	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTGGTCCAGT	NA	False	NA	6	True	AATAAA	-7	NA	52293654	52314097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293711_52293810_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.11	chr10	+	3496	6	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	13	-981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.503449240878	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGTAGTAGTATGTGA	NA	False	NA	5	True	AATAAA	-18	NA	52293655	52315298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293711_52293825_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.12	chr10	+	1199	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	21	3385	21	-3385	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGTCTTACTTGAG	NA	False	NA	41	True	NA	NA	NA	52293663	52312894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.13	chr10	+	1826	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	21	-2182	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTGGTCCAGT	NA	False	NA	6	True	AATAAA	-7	NA	52293663	52314097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.15	chr10	+	2287	6	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	22	-2182	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.503449240878	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTGGTCCAGT	NA	False	NA	6	True	AATAAA	-7	NA	52293664	52314097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293703_52293816_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.16	chr10	+	3610	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	25	-984	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	181.482781552411	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGACTGTAGTAGTATG	NA	False	NA	2	True	AATAAA	-15	NA	52293667	52315295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309555_52312672
ES.2771.18	chr10	+	3253	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	123	1229	123	-1229	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGTGCATATCTATAA	NA	False	NA	NA	False	AATAAA	-30	NA	52293765	52315050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.19	chr10	+	1878	4	ISM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	11569	2182	185	-2182	3prime_fragment	FALSE	canonical	3	398	junction_1	26.3986531642978	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTGGTCCAGT	NA	False	NA	6	True	AATAAA	-7	NA	52305211	52314097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.2	chr10	+	4676	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	-72	1	-72	-1	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTAGAATTTGAGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	52293570	52316278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.20	chr10	+	5408	1	NIC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	4863	-982	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGTAGTAGTATGTG	NA	False	NA	4	True	AATAAA	-17	NA	52309889	52315297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52309900_52315300
ES.2771.3	chr10	+	2457	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	-8	2156	-8	-2156	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCACTTCTTCTTCTT	NA	False	NA	32	True	AATAAA	-33	NA	52293634	52314123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.4	chr10	+	4032	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGTTTTTCTGTTCA	NA	False	NA	NA	False	AATAAA	-27	NA	52293646	52316286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.5	chr10	+	3215	6	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	7	-975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	172.503449240878	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTATGTGAATGTTA	NA	False	NA	11	True	AATAAA	-24	NA	52293649	52315304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672_52313206_52313613
ES.2771.6	chr10	+	3043	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	10	-976	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTAGTATGTGAATGTT	NA	False	NA	10	True	AATAAA	-23	NA	52293652	52315303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.7	chr10	+	3511	4	NIC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	10	-984	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	187.62610574106	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGACTGTAGTAGTATG	NA	False	NA	2	True	AATAAA	-15	NA	52293652	52315295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_52294265_52305288_52305415_52306162_52306313_52312672
ES.2771.8	chr10	+	626	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	10	-3393	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACACAAAAAAGTGTCT	NA	False	NA	33	True	TATAAA	-41	NA	52293652	52312886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.2771.9	chr10	+	2746	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	10	1849	10	-1849	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGAGGACTCAAGGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	52293652	52314430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ES.27710.1	chr5	-	1701	1	Intergenic	novelGene_23056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAACTGACAAACT	NA	False	NA	NA	False	NA	NA	NA	144003521	144001820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144001800_144003500
ES.27711.1	chr5	+	8222	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-79	-29	-79	29	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTGCGGGTTTGGCC	NA	False	NA	NA	False	NA	NA	NA	144037174	144125051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.10	chr5	+	7624	9	NIC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-64	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.0138450753157	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTGTTGCTACATTT	NA	False	NA	NA	False	AATAAA	-20	NA	144037189	144125019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144037595_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.11	chr5	+	7845	14	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	18065	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1509124096221	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTGTTGCTACAT	NA	False	NA	NA	False	AATAAA	-18	NA	144055318	144125017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144055396_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.12	chr5	+	7418	10	ISM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	47158	13	47158	-13	3prime_fragment	FALSE	canonical	3	41	junction_6	10.8832184782097	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATAATAATCTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	144084411	144125009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.13	chr5	+	3932	4	NIC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	65866	-48	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	30.3900568534439	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTATTTAATATTCAA	2728	False	NA	NA	False	AATAAA	-14	NA	144103119	144124974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144103238_144119554_144119688_144119999_144120240_144121533
ES.27711.14	chr5	+	6724	4	ISM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	73172	8	73172	-8	3prime_fragment	FALSE	canonical	3	45	junction_3	12.5698050899765	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATCTCTGTTGCTA	NA	False	NA	NA	False	AATAAA	-15	NA	144110425	144125014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.15	chr5	+	1317	1	ISM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	85582	870	85582	-870	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCCTCTTGATAGCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	144122835	144124152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144122800_144124200
ES.27711.2	chr5	+	6611	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-77	1580	-77	-1580	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATCCATATGTGTAGCC	NA	False	NA	NA	False	NA	NA	NA	144037176	144123442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.4	chr5	+	8060	14	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-73	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	16.5986382844921	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTGTTGCTACATTT	NA	False	NA	NA	False	AATAAA	-20	NA	144037180	144125019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144120123_144120240_144121533
ES.27711.5	chr5	+	7924	15	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-72	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.5853603306609	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTTGCTACATTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	144037181	144125021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144037254_144037514_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.6	chr5	+	8031	13	NIC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-72	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	18.5157590536638	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTGTTGCTACAT	NA	False	NA	NA	False	AATAAA	-18	NA	144037181	144125017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ES.27711.7	chr5	+	8190	14	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.1235078961425	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGTTGCTACATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	144037186	144125020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121522
ES.27711.8	chr5	+	4362	11	ISM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	-64	11681	-64	-11681	5prime_fragment	FALSE	canonical	3	41	junction_10	8.8068155425216	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTCTGATTTGATTT	NA	False	NA	NA	False	AAAAAG	-12	NA	144037189	144113341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426
ES.27712.1	chr5	-	154	1	Intergenic	novelGene_23057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	144051601	144051447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144051400_144051600
ES.27713.1	chr5	-	156	1	Intergenic	novelGene_23058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATCTTAATAA	NA	False	NA	NA	False	NA	NA	NA	144102297	144102141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144102100_144102300
ES.27714.1	chr5	+	3502	2	FSM	ENSMUSG00000052271.8	ENSMUST00000060747.8	3494	2	-11	3	-11	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGCTGTGGTATAAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	144127092	144131256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144127177_144127838
ES.27715.1	chr5	-	5134	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	-25	-3	-25	3	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAGATTTTTATTGGA	NA	False	NA	-3	True	AATAAA	-20	NA	144160458	144131256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.10	chr5	-	5161	24	NIC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	63	junction_16	9.77071741043388	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160391	144131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.11	chr5	-	4950	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_22	17.5315192344151	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160397	144131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154160_144154227_144155331_144155567_144160312
ES.27715.12	chr5	-	5049	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	18.6319897398712	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144160385	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155572_144160322
ES.27715.13	chr5	-	4546	16	NNC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-1421	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	22.6368431250178	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144146878	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145986_144146043
ES.27715.14	chr5	-	2930	3	NIC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	89	-4	intron_retention	FALSE	canonical	3	84	junction_1	6.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144135740	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133277_144134709
ES.27715.15	chr5	-	5323	21	NNC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-1312	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.5364445450027	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144153789	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145824_144146025_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720
ES.27715.16	chr5	-	4234	19	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	19.6371404219305	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144160381	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136022_144143321_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.17	chr5	-	5120	24	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-18	-4	intron_retention	FALSE	canonical	0	0	junction_21	18.8375805862655	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144160394	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154086_144154227_144155331_144155567_144160312
ES.27715.19	chr5	-	3098	6	NIC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-1325	-4	intron_retention	FALSE	canonical	3	81	junction_2	5.87877538267963	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144137929	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144133277_144134709_144134803_144135372_144136128_144136547_144136605_144137632_144137713_144137829
ES.27715.2	chr5	-	4890	24	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.8189452959079	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGACAAGATTTTTATT	NA	False	NA	-6	True	AATAAA	-17	NA	144160401	144131259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134710_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144155331_144155567_144160312
ES.27715.20	chr5	-	4372	16	NNC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-1281	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	22.6368431250178	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGACTGACAAGATTTT	NA	False	NA	-10	True	AATAAA	-13	NA	144146738	144131263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145933_144146024
ES.27715.22	chr5	-	4840	24	NIC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	17	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	19.0072118439132	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGTGACTGACAAGATTT	NA	False	NA	-11	True	AATAAA	-12	NA	144160407	144131264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144160312
ES.27715.24	chr5	-	7993	18	NNC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-615	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	21.3653342742518	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGTGACTGACAAGATTT	NA	False	NA	-11	True	AATAAA	-12	NA	144153092	144131264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144141571_144142982_144143141_144143234_144143385_144144211_144145986_144146043_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070
ES.27715.26	chr5	-	5092	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6434006792991	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144160413	144131265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134815_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.27	chr5	-	2003	3	NIC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	212	-6	intron_retention	FALSE	canonical	3	87	junction_1	5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144134801	144131265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144133070_144133169_144133277_144134709
ES.27715.28	chr5	-	4101	18	NIC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	-14	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	21.2976922576539	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144160390	144131265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144155331_144155567_144160312
ES.27715.30	chr5	-	6833	22	NIC	ENSMUSG00000066621.13	novel	4329	24	NA	NA	10	-6	intron_retention	FALSE	canonical	3	63	junction_15	9.26994998849053	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144160414	144131265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144154227_144155331_144155567_144160312
ES.27715.31	chr5	-	5004	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.5397470916467	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	False	NA	-12	True	AATAAA	-11	NA	144160380	144131265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133043_144133185_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.32	chr5	-	4205	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	26	875	17	34	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGATAAATACGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	144160407	144132134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.33	chr5	-	1886	1	NIC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	988	29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCTAGATAAATACGC	NA	False	NA	NA	False	NA	NA	NA	144134025	144132139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132100_144134000
ES.27715.34	chr5	-	5223	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	1319	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	18.6319897398712	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCTAGATAAATACGC	NA	False	NA	NA	False	NA	NA	NA	144159022	144132139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144157904
ES.27715.36	chr5	-	3670	22	ISM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	63	3020	0	1122	5prime_fragment	FALSE	canonical	3	63	junction_14	9.37357698950786	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAATTTTATGTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	144160370	144134279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.37	chr5	-	2890	18	ISM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	37	6282	-20	-236	5prime_fragment	FALSE	canonical	3	63	junction_10	9.88305319647876	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCTTCAGGATTGG	NA	False	NA	NA	False	NA	NA	NA	144160396	144137541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.38	chr5	-	934	2	FSM	ENSMUSG00000066621.13	ENSMUST00000136018.2	493	2	-38	-403	10	403	multi-exon	FALSE	canonical	3	82	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144160414	144154734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144155567_144160312
ES.27715.4	chr5	-	5385	24	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	6	junction_21	17.8590363565373	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGACAAGATTTTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	144160392	144131260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154160_144154227_144155331_144155567_144160312
ES.27715.5	chr5	-	5263	24	FSM	ENSMUSG00000066621.13	ENSMUST00000153103.8	4329	24	-26	-908	-15	-1	multi-exon	FALSE	canonical	3	63	junction_17	9.50793122312458	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGACAAGATTTTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	144160391	144131260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144154227_144155331_144155567_144160312
ES.27715.6	chr5	-	4988	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6434006792991	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160360	144131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134765_144135376_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.7	chr5	-	5051	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	18.4496311315129	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160389	144131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148355_144149384_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27715.9	chr5	-	5010	24	NIC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	-21	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	18.6702557536174	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGACTGACAAGATTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	144160397	144131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ES.27716.1	chr5	+	174	1	Intergenic	novelGene_23059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144169086	144169260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144169100_144169300
ES.27717.1	chr5	-	172	1	Intergenic	novelGene_23060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAACGGT	NA	False	NA	NA	False	NA	NA	NA	144172471	144172299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144172300_144172500
ES.27718.1	chr5	-	1472	1	Intergenic	novelGene_23061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	144191428	144189956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144190000_144191400
ES.27719.1	chr5	+	826	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	-45	174	-36	5	multi-exon	FALSE	canonical	3	246	junction_1	16.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTTCTGCTCGACCA	1584	False	NA	5	True	AATAAA	-20	NA	144191998	144201210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144192330_144192619_144192723_144200818
ES.27719.2	chr5	+	969	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	-16	2	-7	-2	multi-exon	FALSE	canonical	3	246	junction_1	16.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTGCAGTCAAGGTA	1613	False	NA	1	True	ATTAAA	-14	NA	144192027	144201382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144192330_144192619_144192723_144200818
ES.27719.3	chr5	+	5652	2	NNC	ENSMUSG00000047843.17	novel	669	3	NA	NA	3473	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	5102	False	NA	0	True	AATAAA	-15	NA	144195516	144201205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144199821_144199857
ES.27719.4	chr5	+	4281	1	NIC	ENSMUSG00000047843.17	novel	669	3	NA	NA	4881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	6510	False	NA	0	True	AATAAA	-15	NA	144196924	144201205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144196900_144201200
ES.27719.5	chr5	+	8584	2	Genic_Genomic	ENSMUSG00000047843.17	novel	669	3	NA	NA	7286	6566	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGGAAAAAGTAAA	8915	False	NA	NA	False	NA	NA	NA	144199329	144207950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_144199821_144199857
ES.27719.6	chr5	+	3475	2	Genic_Genomic	ENSMUSG00000047843.17	novel	669	3	NA	NA	7361	1532	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCCATGGCAGGACTTT	8990	False	NA	NA	False	NA	NA	NA	144199404	144202916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_144199821_144199857
ES.2772.1	chr10	-	1820	1	Intergenic	novelGene_2117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTCAAATTCTAAACCTG	NA	False	NA	NA	False	NA	NA	NA	52301655	52299835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_52299800_52301700
ES.27720.1	chr5	-	3237	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	7	3	7	-3	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGAGCTGTAAGTGGT	NA	False	NA	-4	True	AATAAA	-14	NA	144294915	144201338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ES.27720.2	chr5	-	2299	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	15	933	15	-933	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTACCTTTTGATTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	144294907	144202268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ES.27720.3	chr5	-	4147	2	ISM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	87928	937	18723	-937	3prime_fragment	FALSE	canonical	3	26	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATTTTTACCTTTTGA	2539	False	NA	NA	False	ATTAAA	-14	NA	144206994	144202272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144202843_144203417
ES.27720.5	chr5	-	2057	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	-2	1192	-2	-1192	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAGCAGTAAATTTGG	NA	False	NA	NA	False	AATAAA	-30	NA	144294924	144202527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ES.27720.6	chr5	-	175	1	Intergenic	novelGene_23062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATGAGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	144290821	144290646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144290600_144290800
ES.27721.1	chr5	-	190	1	Intergenic	novelGene_23063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTATAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	144305340	144305150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144305200_144305300
ES.27722.1	chr5	+	183	1	Intergenic	novelGene_23064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGTTCCCCAGG	NA	False	NA	NA	False	NA	NA	NA	144313347	144313530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144313300_144313500
ES.27723.1	chr5	+	176	1	Intergenic	novelGene_23065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGGTAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	144318881	144319057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144318900_144319100
ES.27724.1	chr5	+	174	1	Intergenic	novelGene_23066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144327406	144327580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144327400_144327600
ES.27725.1	chr5	+	541	3	Intergenic	novelGene_23067	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGATCCTGGAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	144393862	144396773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144394087_144396001_144396143_144396597
ES.27726.1	chr5	+	2591	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-51	-4	-51	4	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCTTGTTCTCTCCCCT	NA	False	NA	15	True	ATTAAA	-21	NA	144482660	144494292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
ES.27726.2	chr5	+	1777	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-18	777	-18	-777	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTGGTGTCTCATGTG	NA	False	NA	NA	False	NA	NA	NA	144482693	144493511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
ES.27726.3	chr5	+	3238	4	ISM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	-17	5	-17	-5	intron_retention	FALSE	canonical	3	146	junction_1	14.1970262926979	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTTTGAGCTTCTTGTT	NA	False	NA	6	True	ATTAAA	-12	NA	144482694	144494283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106
ES.27726.4	chr5	+	2432	6	NNC	ENSMUSG00000059991.8	novel	2536	5	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	70.513544798145	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGCTTCTTGTTCTC	NA	False	NA	9	True	ATTAAA	-15	NA	144482698	144494286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976_144493743_144493857
ES.27726.5	chr5	+	2535	5	NNC	ENSMUSG00000059991.8	novel	2536	5	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.7031606735079	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGCTTTGAGCTTCTT	NA	False	NA	3	True	ATTAAA	-9	NA	144482698	144494280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144483294_144484934_144485146_144490209_144490455_144492106_144492287_144492976
ES.27726.6	chr5	+	1163	4	NNC	ENSMUSG00000059991.8	novel	2536	5	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.7011668778406	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTTGAGCTTCTTGTTC	NA	False	NA	7	True	ATTAAA	-13	NA	144482698	144494284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144483294_144484928_144485146_144490209_144490455_144494178
ES.27726.7	chr5	+	1492	2	ISM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	9393	2	9393	-2	3prime_fragment	FALSE	canonical	3	192	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGCTTCTTGTTCTC	NA	False	NA	9	True	ATTAAA	-15	NA	144492104	144494286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144492287_144492976
ES.27727.1	chr5	+	3454	1	Intergenic	novelGene_23068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144512523	144515977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144512500_144516000
ES.27728.1	chr5	+	175	1	Intergenic	novelGene_23069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAACAA	7135	False	NA	NA	False	NA	NA	NA	144553021	144553196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144553000_144553200
ES.27729.1	chr5	+	3175	2	Intergenic	novelGene_23070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGTGGTCTCGCTGGTCCT	NA	False	NA	NA	False	NA	NA	NA	144607109	144615560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144607408_144612683
ES.2773.1	chr10	+	1900	1	FSM	ENSMUSG00000112791.2	ENSMUST00000218112.2	505	1	-137	-1258	-137	1258	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	52404477	52406377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_52404500_52406400
ES.27730.1	chr5	+	5053	1	Intergenic	novelGene_23071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATACATGAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	144626474	144631527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144626500_144631500
ES.27731.1	chr5	+	188	1	Intergenic	novelGene_23072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCACAAAAAAAAAGCAAATG	NA	False	NA	NA	False	NA	NA	NA	144646520	144646708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144646500_144646700
ES.27732.1	chr5	+	216	1	Intergenic	novelGene_23076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	144660973	144661189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144661000_144661200
ES.27733.1	chr5	-	178	2	Intergenic	novelGene_23073	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	269	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	144661381	144656057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144656185_144661330
ES.27733.2	chr5	-	181	1	Intergenic	novelGene_23074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACAGATAGA	NA	False	NA	NA	False	NA	NA	NA	144656468	144656287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144656300_144656500
ES.27733.3	chr5	-	157	1	Intergenic	novelGene_23075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAAATCTTTCT	NA	False	NA	NA	False	NA	NA	NA	144660876	144660719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144660700_144660900
ES.27733.4	chr5	-	183	1	Intergenic	novelGene_23077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAATCTATCA	NA	False	NA	NA	False	NA	NA	NA	144661382	144661199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144661200_144661400
ES.27734.1	chr5	-	156	1	Intergenic	novelGene_23078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAACAACAA	NA	False	NA	NA	False	NA	NA	NA	144670044	144669888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144669900_144670000
ES.27735.1	chr5	+	174	1	Intergenic	novelGene_23079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACAATTATTAAGCAAT	2496	False	NA	NA	False	NA	NA	NA	144681706	144681880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144681700_144681900
ES.27736.1	chr5	+	294	1	Intergenic	novelGene_23081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTGTATCAATATAAA	3562	False	NA	NA	False	NA	NA	NA	144682772	144683066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144682800_144683100
ES.27736.2	chr5	+	188	1	Intergenic	novelGene_23080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCTGGGAC	3562	False	NA	NA	False	NA	NA	NA	144682772	144682960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144682800_144683000
ES.27737.1	chr5	-	2797	8	FSM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	7	1	7	-1	multi-exon	TRUE	canonical	2	3	junction_7	5.20204041600946	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTGTGGCAAGAATAT	NA	False	NA	-16	True	AATAAA	-16	NA	144698452	144672725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020_144692327_144698266
ES.27737.4	chr5	-	2533	8	NNC	ENSMUSG00000043388.9	novel	2805	8	NA	NA	8507	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	6.92820323027551	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGTGGCAAGAAT	NA	False	NA	-18	True	AATAAA	-14	NA	144689952	144672727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144689565_144689717_144689873
ES.27738.1	chr5	+	190	1	Intergenic	novelGene_23082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	144701676	144701866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144701700_144701900
ES.27739.1	chr5	+	12709	71	NIC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	-129	1	combination_of_known_junctions	TRUE	canonical	3	10	junction_15	31.3189516857426	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGCCCTATTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	144704772	144796589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728083_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.11	chr5	+	1960	3	ISM	ENSMUSG00000045482.17	ENSMUST00000136379.2	2621	12	64	14591	64	-3812	5prime_fragment	FALSE	canonical	3	42	junction_1	11.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATAAAGAC	NA	False	NA	NA	False	NA	NA	NA	144704965	144710126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144705056_144707898_144708060_144708417
ES.27739.13	chr5	+	6814	44	NNC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	69	-1639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	14.2148772986047	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATTTCTCTTGGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	144704970	144758281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758024
ES.27739.14	chr5	+	12475	71	NIC	ENSMUSG00000045482.17	novel	12456	71	NA	NA	85	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_63	31.6517433507675	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTGTGCCCTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	144704986	144796587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782278_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.16	chr5	+	12704	72	NNC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	32.447525274651	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTGTGCCCTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	144705330	144796585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144705532_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793901_144794194_144794390_144795483
ES.27739.17	chr5	+	12653	71	NIC	ENSMUSG00000045482.17	novel	12456	71	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.0856665818243	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144705339	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144705532_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.18	chr5	+	8960	36	NNC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	22	0	intron_retention	FALSE	non_canonical	0	0	junction_4	29.8747863112501	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144707981	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144708060_144708417_144708468_144713912_144714024_144714690_144714737_144754517_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.19	chr5	+	9085	48	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-1772	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.0872543565915	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	NA	False	NA	NA	False	AATAAA	-9	NA	144739766	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144739896_144739972_144740171_144740848_144741102_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.2	chr5	+	1698	2	ISM	ENSMUSG00000045482.17	ENSMUST00000136379.2	2621	12	7	15268	7	3948	intron_retention	FALSE	canonical	3	42	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTTCTTGATCATGAT	NA	False	NA	NA	False	NA	NA	NA	144704908	144709449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144705056_144707898
ES.27739.20	chr5	+	9490	46	NIC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-1414	-5	intron_retention	FALSE	canonical	3	41	junction_1	28.8748170856266	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	NA	False	NA	NA	False	AATAAA	-9	NA	144740124	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.23	chr5	+	7768	39	NNC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	1403	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.9652685480945	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144750243	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753127_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781005_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.24	chr5	+	7521	37	NIC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	2638	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	28.6718745269452	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144751478	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.26	chr5	+	6429	32	ISM	ENSMUSG00000045482.17	ENSMUST00000038980.13	12344	70	46863	-25	-1846	0	3prime_fragment	FALSE	canonical	3	14	junction_24	27.812663029021	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTGCCCTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	144754761	144796586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782278_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.28	chr5	+	5503	26	NNC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	5498	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_22	36.3393780904407	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	144762105	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793901_144794194_144794390_144795483
ES.27739.31	chr5	+	5090	24	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	6904	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_20	34.814713444343	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTGCCCTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	144763511	144796586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793953_144794194_144794390_144795483
ES.27739.32	chr5	+	5118	23	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	8690	-5	intron_retention	TRUE	non_canonical	0	0	junction_21	38.7106238220752	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	NA	False	NA	NA	False	AATAAA	-9	NA	144765297	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793883_144794038_144794390_144795483
ES.27739.33	chr5	+	6596	18	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-6079	-5	intron_retention	TRUE	canonical	0	0	junction_15	45.0440768373766	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	1154	False	NA	NA	False	AATAAA	-9	NA	144769715	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781005_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790442_144793696_144793901_144794194_144794390_144795483
ES.27739.34	chr5	+	3935	16	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-2997	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.9504469582864	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTATTTGCTGTGCC	1464	False	NA	NA	False	AATAAA	-7	NA	144772797	144796579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144772928_144773938_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781005_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.35	chr5	+	3887	17	NNC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	-2889	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	39.8716691398793	212	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	1572	False	NA	NA	False	AATAAA	-16	NA	144772905	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790408_144790857_144790936_144793696_144793901_144794194_144794390_144795483
ES.27739.36	chr5	+	4521	16	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-2887	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.4989156484841	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTGCCCTATTTT	1574	False	NA	NA	False	AATAAA	-14	NA	144772907	144796586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144772934_144773941_144774790_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.37	chr5	+	3830	16	NNC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	-2876	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.510288321021	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	1585	False	NA	NA	False	AATAAA	-16	NA	144772918	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781107_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.38	chr5	+	8645	13	NIC	ENSMUSG00000045482.17	novel	12479	71	NA	NA	-1351	0	intron_retention	FALSE	canonical	3	98	junction_1	18.8287236246468	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	3110	False	NA	NA	False	AATAAA	-16	NA	144774443	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144793901_144794194_144794390_144795483
ES.27739.39	chr5	+	3703	14	NIC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	355	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.7869219128711	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	4816	False	NA	NA	False	AATAAA	-9	NA	144776149	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.40	chr5	+	3709	13	ISM	ENSMUSG00000045482.17	ENSMUST00000132925.2	11581	63	54524	-2	1064	0	3prime_fragment	FALSE	canonical	3	101	junction_3	18.3817542386163	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCCCTATTTTTG	5525	False	NA	NA	False	AATAAA	-16	NA	144776858	144796588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ES.27739.41	chr5	+	2626	8	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	6444	-5	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	35.9619980830105	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTATTTGCTGTGCCCT	NA	False	NA	NA	False	AATAAA	-9	NA	144782238	144796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793953_144794194_144794390_144795483
ES.27739.42	chr5	+	3972	3	NNC	ENSMUSG00000045482.17	novel	11581	63	NA	NA	-977	-1	intron_retention	TRUE	canonical	0	0	junction_1	75	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTGTGCCCTATTT	2389	False	NA	NA	False	AATAAA	-13	NA	144791415	144796585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144793901_144794004_144794390_144795483
ES.27739.5	chr5	+	12605	72	NNC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	56	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_68	31.6742119591551	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGCCCTATTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	144704957	144796589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793901_144794194_144794390_144795483
ES.27739.7	chr5	+	8829	55	NIC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	56	8	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	18.5888663818095	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGTTCGTTTGCATGT	NA	False	NA	NA	False	NA	NA	NA	144704957	144771329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728083_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966
ES.27739.8	chr5	+	12548	72	NNC	ENSMUSG00000045482.17	novel	12456	71	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_68	32.0039424272499	232	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTGTGCCCTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	144704957	144796586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782278_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144790857_144790936_144793696_144793901_144794194_144794390_144795483
ES.27739.9	chr5	+	10703	67	NIC	ENSMUSG00000045482.17	novel	12344	70	NA	NA	57	-8139	combination_of_known_junctions	FALSE	canonical	3	28	junction_21	28.0540440000485	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTACCTGGTCATGAACGA	NA	False	NA	NA	False	NA	NA	NA	144704958	144788014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_144705056_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929
ES.2774.1	chr10	-	201	1	Intergenic	novelGene_2118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGTAGGTGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	53005303	53005102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_53005100_53005300
ES.27740.1	chr5	-	177	1	Intergenic	novelGene_23083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATTAAACCGAA	NA	False	NA	NA	False	NA	NA	NA	144710624	144710447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144710400_144710600
ES.27741.1	chr5	-	4483	1	Antisense	novelGene_ENSMUSG00000045482.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	144788013	144783530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_144783500_144788000
ES.27742.1	chr5	+	1111	3	Antisense	novelGene_ENSMUSG00000038780.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCCTGCCCTCTCCAA	NA	False	NA	NA	False	AATAAA	-36	NA	144812431	144816012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_144812569_144814670_144815172_144815539
ES.27743.1	chr5	+	187	1	Intergenic	novelGene_23084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	144850026	144850213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_144850000_144850200
ES.27744.1	chr5	-	6003	16	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-27	5	intron_retention	FALSE	canonical	1	2	junction_12	74.6730354426698	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTCTCTTTCTTTCT	NA	False	NA	-2	True	AATAAA	-25	NA	144902684	144813299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817520_144818427_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.12	chr5	-	5877	5	NIC	ENSMUSG00000038780.15	novel	4710	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	174	junction_3	25.4103817366052	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	144823287	144813306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171
ES.27744.14	chr5	-	6374	16	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_10	93.6790264680414	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTCCTTCCTCTCT	NA	False	NA	-10	True	AATAAA	-17	NA	144902652	144813307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833433_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.16	chr5	-	5243	18	NNC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.5666250063705	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTTTTTCCTTCCTC	NA	False	NA	-13	True	AATAAA	-14	NA	144902667	144813310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821470_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.17	chr5	-	5317	18	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	69.8192922050477	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCCTTTTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-13	NA	144902689	144813311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823229_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.18	chr5	-	5365	18	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	70.6564866119596	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCCTTTTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-13	NA	144902648	144813311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833268_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.19	chr5	-	5506	17	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	12	0	intron_retention	FALSE	canonical	1	1	junction_1	73.1411039959748	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCCTTTTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-13	NA	144902637	144813311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816298_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.2	chr5	-	5383	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-28	-12	-28	5	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTCTCTTTCTTTCT	NA	False	NA	-2	True	AATAAA	-25	NA	144902685	144813299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.20	chr5	-	5678	1	NIC	ENSMUSG00000038780.15	novel	4710	6	NA	NA	4296	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTCCTTTTTCCTTCC	NA	False	NA	-15	True	AATAAA	-12	NA	144818990	144813312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144813300_144819000
ES.27744.21	chr5	-	3208	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-53	-430	-53	430	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTGTGTTCTCTACC	NA	False	NA	NA	False	AAAAAG	-42	NA	144902710	144815490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.22	chr5	-	3176	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	-14	2181	-14	428	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTGTGTTCTCTA	NA	False	NA	NA	False	AAAAAG	-40	NA	144902671	144815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.23	chr5	-	3275	19	NNC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	17	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	91.3310353860688	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTGTGTTCTCTA	NA	False	NA	NA	False	AAAAAG	-40	NA	144902632	144815492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144843765_144843913_144902310
ES.27744.24	chr5	-	3281	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	10	422	intron_retention	FALSE	canonical	3	98	junction_2	52.099026802331	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACAATTTGTTGTGT	NA	False	NA	NA	False	AAAAAG	-34	NA	144902639	144815498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.25	chr5	-	2973	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	19	422	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	74.3727678236463	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACAATTTGTTGTGT	NA	False	NA	NA	False	AAAAAG	-34	NA	144902630	144815498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.26	chr5	-	2836	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	10	2497	2	112	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGGAGCCTCAAAGCC	NA	False	NA	73	True	NA	NA	NA	144902647	144815808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.27	chr5	-	2587	17	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	10	18	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGGGAAGGCTGTGGTG	NA	False	NA	-21	True	AATAAA	-34	NA	144902639	144815902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.28	chr5	-	5301	9	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	4256	12	intron_retention	FALSE	canonical	3	174	junction_5	35.4286254319865	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCACGGTGGGAAGGCT	NA	False	NA	-27	True	AATAAA	-28	NA	144830548	144815908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144826613_144828124_144828324_144829970
ES.27744.3	chr5	-	5465	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	21	1	intron_retention	TRUE	canonical	3	98	junction_2	52.099026802331	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTTCCTCTCTTTCT	NA	False	NA	-6	True	AATAAA	-21	NA	144902628	144813303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.30	chr5	-	2737	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-6	-6	-6	6	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCTTGGCACGGTGGG	NA	False	NA	-33	True	AATAAA	-22	NA	144902663	144815914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.32	chr5	-	2834	19	FSM	ENSMUSG00000038780.15	ENSMUST00000110677.8	5420	19	-29	2615	-21	1	multi-exon	FALSE	canonical	0	0	junction_10	88.3433956533003	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCCTCCTTGGCACG	NA	False	NA	-38	True	AATAAA	-17	NA	144902678	144815919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144830889_144830968_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.33	chr5	-	2766	18	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	71.1603287481392	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCCTCCTTGGCACG	NA	False	NA	-38	True	AATAAA	-17	NA	144902678	144815919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821578_144823167_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.34	chr5	-	2808	20	NNC	ENSMUSG00000038780.15	novel	5420	19	NA	NA	-52046	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	86.0552872598422	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTCAGCCTCCTTGGCA	NA	False	NA	-40	True	AATAAA	-15	NA	144954703	144815921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310_144902641_144937316_144937367_144954661
ES.27744.35	chr5	-	2871	19	NNC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	87.1072136316314	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCCTCAGCCTCCTT	NA	False	NA	-44	True	AATAAA	-11	NA	144902652	144815925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144843765_144843913_144902310
ES.27744.36	chr5	-	3289	16	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	-4	-1525	intron_retention	FALSE	canonical	3	174	junction_3	35.2848724274614	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACCTGGTAAGCCCT	NA	False	NA	NA	False	AATACA	-16	NA	144902661	144817445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.37	chr5	-	1995	13	ISM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	5	5314	-3	167	5prime_fragment	FALSE	canonical	3	239	junction_1	24.1504255771106	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGACTTGTGTTCTTTTC	NA	False	NA	NA	False	AATGAA	-21	NA	144902652	144821234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.38	chr5	-	1576	12	ISM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	10	7328	2	-1847	5prime_fragment	FALSE	canonical	3	239	junction_8	22.8266916402634	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTATGGACTCTTCCAG	NA	False	NA	NA	False	NA	NA	NA	144902647	144823248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.39	chr5	-	1887	8	ISM	ENSMUSG00000038770.18	ENSMUST00000110672.8	2262	13	4505	-205	-449	-3	3prime_fragment	FALSE	canonical	0	0	junction_2	0.699854212223765	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTAAACTTACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	144941938	144920331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_144921028_144922458_144922545_144926495_144926643_144929515_144929699_144930655_144930887_144933797_144934062_144937951_144938035_144941741
ES.27744.4	chr5	-	5194	17	NIC	ENSMUSG00000038780.15	novel	5420	19	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	144902648	144813304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.40	chr5	-	191	1	Intergenic	novelGene_23085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACACACACAAAT	NA	False	NA	NA	False	NA	NA	NA	144931621	144931430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_144931400_144931600
ES.27744.5	chr5	-	5202	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	74.3727678236463	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	144902665	144813304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.6	chr5	-	5368	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	-27	-2616	-27	0	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	144902684	144813304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.7	chr5	-	5412	19	FSM	ENSMUSG00000038780.15	ENSMUST00000110677.8	5420	19	7	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_10	88.3433956533003	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTCCTTCCTCTCTTT	NA	False	NA	-8	True	AATAAA	-19	NA	144902642	144813305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144830889_144830968_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27744.9	chr5	-	5246	17	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	70.8323008503183	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTCCTTCCTCTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	144902640	144813306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_144816267_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ES.27745.1	chr5	+	1629	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	-1	4	-1	1	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTTTTCTTTATA	NA	False	NA	18	True	ATTAAA	-19	NA	145020638	145045567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ES.27745.2	chr5	+	1724	1	NIC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	5	-10625	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTAGGTGAATCAATGA	NA	False	NA	NA	False	NA	NA	NA	145020644	145022368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145020600_145022400
ES.27745.3	chr5	+	1589	10	NNC	ENSMUSG00000029621.15	novel	1632	10	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	117.64447382781	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGCAAAAGTGTTTTT	NA	False	NA	10	True	ATTAAA	-11	NA	145020649	145045559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045207
ES.27745.5	chr5	+	1413	9	NNC	ENSMUSG00000029621.15	novel	1685	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	122.64073548377	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTGTTTTTTCTTTAT	NA	False	NA	17	True	ATTAAA	-18	NA	145020691	145045566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145037994_145041507_145041702_145043854_145043946_145045186
ES.27745.7	chr5	+	322	1	NIC	ENSMUSG00000029621.15	novel	425	3	NA	NA	2326	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	145035392	145035714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145035400_145035700
ES.27745.8	chr5	+	1676	3	FSM	ENSMUSG00000029621.15	ENSMUST00000142276.2	926	3	-585	-165	-585	1	multi-exon	FALSE	canonical	3	388	junction_2	10.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTTTTCTTTATA	NA	False	NA	18	True	ATTAAA	-19	NA	145040497	145045567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145041702_145043854_145043946_145045186
ES.27746.1	chr5	-	1592	1	Antisense	novelGene_ENSMUSG00000029621.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	145033360	145031768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_145031800_145033400
ES.27747.1	chr5	+	2022	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	-424	1507	-424	104	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCACTCGCTTTTA	7608	False	NA	35	True	AATAAA	-21	NA	145050600	145065002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.10	chr5	+	1604	11	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-3	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	733.716164466887	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8072	False	NA	28	True	AATAAA	-14	NA	145051064	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145052677_145052731_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.11	chr5	+	1729	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	40	1336	-3	275	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACCAAATGTGGAGAGG	8072	False	NA	NA	False	NA	NA	NA	145051064	145065173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.12	chr5	+	3068	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	41	-4	-2	4	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTGTCTGGGTGACG	8073	False	NA	NA	False	AATATA	-19	NA	145051065	145066513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.13	chr5	+	4002	5	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-2	-17	intron_retention	FALSE	canonical	3	1664	junction_4	152.526227252889	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	8073	False	NA	NA	False	AAGAAA	-29	NA	145051065	145064866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145062777_145063536
ES.27747.14	chr5	+	1701	8	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	4	95	intron_retention	FALSE	canonical	1	41	junction_4	642.056708030164	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCGTGGTGGCAC	8079	False	NA	26	True	AATAAA	-12	NA	145051071	145064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061437_145061505_145062387_145062777_145063536_145063743_145064445
ES.27747.15	chr5	+	4732	6	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	6	97	intron_retention	FALSE	canonical	3	1707	junction_4	90.4265447753037	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8081	False	NA	28	True	AATAAA	-14	NA	145051073	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145061505_145062387_145062595_145062700_145064537_145064630
ES.27747.16	chr5	+	1495	10	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	8	-15	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	581.185952265805	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8083	False	NA	-99	True	AAGAAA	-31	NA	145051075	145064868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051234_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.17	chr5	+	1586	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	9	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	579.89586123419	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8084	False	NA	28	True	AATAAA	-14	NA	145051076	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064398_145064537_145064630
ES.27747.18	chr5	+	2209	8	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	52	1641	9	-15	intron_retention	FALSE	canonical	3	1600	junction_4	151.087216331414	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8084	False	NA	-99	True	AAGAAA	-31	NA	145051076	145064868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536
ES.27747.19	chr5	+	1398	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	821.402068432197	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCCAAAACCCAAAAAAT	8084	False	NA	-69	True	NA	NA	NA	145051076	145064898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058079_145058141_145058466_145058550_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.2	chr5	+	1576	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	10	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	583.629787104001	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8042	False	NA	29	True	AATAAA	-15	NA	145051034	145064996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058472_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.20	chr5	+	3143	7	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	9	97	intron_retention	FALSE	canonical	3	1664	junction_5	133.123272028431	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8084	False	NA	28	True	AATAAA	-14	NA	145051076	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145061505_145062387_145062777_145063536_145064537_145064630
ES.27747.23	chr5	+	1492	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	15	97	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_4	573.437156835434	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8090	False	NA	28	True	AATAAA	-14	NA	145051082	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061437_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.24	chr5	+	1883	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	58	1164	15	447	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTAATCTCTTCATT	8090	False	NA	NA	False	NA	NA	NA	145051082	145065345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.25	chr5	+	2333	8	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	15	-4	intron_retention	FALSE	canonical	3	1664	junction_5	123.506919578109	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAACCCAAAACCCAAA	8090	False	NA	-73	True	NA	NA	NA	145051082	145064894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145061505_145062387_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.26	chr5	+	1542	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-15	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	580.049572168482	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8103	False	NA	28	True	AATAAA	-14	NA	145051095	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064608
ES.27747.27	chr5	+	1498	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	579.89586123419	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8108	False	NA	29	True	AATAAA	-15	NA	145051100	145064996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064463_145064537_145064630
ES.27747.28	chr5	+	1621	9	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	97	intron_retention	FALSE	canonical	3	1600	junction_4	141.003047396147	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8108	False	NA	28	True	AATAAA	-14	NA	145051100	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.29	chr5	+	1509	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	580.049572168482	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8108	False	NA	28	True	AATAAA	-14	NA	145051100	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064531_145064630
ES.27747.3	chr5	+	1484	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	10	1611	10	0	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCCAAAACCCAAAAAAT	8042	False	NA	-69	True	NA	NA	NA	145051034	145064898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.30	chr5	+	1576	11	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	97	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	731.944642715554	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8108	False	NA	28	True	AATAAA	-14	NA	145051100	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058079_145058141_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.31	chr5	+	3300	7	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	98	intron_retention	FALSE	canonical	3	1664	junction_4	124.54015416724	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCACTCG	8108	False	NA	29	True	AATAAA	-15	NA	145051100	145064996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.32	chr5	+	4048	5	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1664	junction_4	107.257866844349	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCCAAAACCCAAAAAAT	8108	False	NA	-69	True	NA	NA	NA	145051100	145064898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145061505_145062387_145062777_145063536
ES.27747.33	chr5	+	1501	10	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	565.902840328053	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCGTGGTGGCAC	8108	False	NA	26	True	AATAAA	-12	NA	145051100	145064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059455_145060398_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.34	chr5	+	2038	9	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-10	-27	intron_retention	FALSE	canonical	1	41	junction_4	601.791686860993	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAGGCCAAAAAAAA	8108	False	NA	NA	False	AAGAAA	-19	NA	145051100	145064856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061437_145061505_145062387_145062595_145062700_145062777_145063536_145064537_145064630
ES.27747.35	chr5	+	1405	9	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-7	95	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	581.628519224255	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCGTGGTGGCAC	8111	False	NA	26	True	AATAAA	-12	NA	145051103	145064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.36	chr5	+	2283	8	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	103	1516	2	95	intron_retention	FALSE	canonical	3	1600	junction_4	151.087216331414	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCGTGGTGGCAC	8135	False	NA	26	True	AATAAA	-12	NA	145051127	145064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536
ES.27747.37	chr5	+	7210	1	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-2800	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCCAAAACCCAAAAAAT	NA	False	NA	-69	True	NA	NA	NA	145057688	145064898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145057700_145064900
ES.27747.38	chr5	+	5207	3	ISM	ENSMUSG00000029622.17	ENSMUST00000196111.5	1394	10	6842	-11	-2525	-4	intron_retention	FALSE	canonical	3	1955	junction_1	50.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAACCCAAAACCCAAA	NA	False	NA	-73	True	NA	NA	NA	145057963	145064894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145058550_145059341_145059447_145060378
ES.27747.39	chr5	+	1468	9	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	7436	1516	-2028	95	3prime_fragment	FALSE	canonical	3	1600	junction_3	145.080958002765	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCGGGCGTGGTGGCAC	NA	False	NA	26	True	AATAAA	-12	NA	145058460	145064993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.4	chr5	+	3260	8	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	15	103	intron_retention	FALSE	canonical	3	1664	junction_5	127.496458534249	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTGGCACTCGCTTTT	8047	False	NA	34	True	AATAAA	-20	NA	145051039	145065001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.40	chr5	+	4262	2	NNC	ENSMUSG00000029622.17	novel	850	2	NA	NA	-1323	-15	intron_retention	TRUE	non_canonical	0	0	junction_1	0	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-99	True	AAGAAA	-31	NA	145059165	145064868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145063272_145064712
ES.27747.41	chr5	+	2388	5	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-120	-4	intron_retention	FALSE	canonical	3	1664	junction_3	73.3246206945525	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAACCCAAAACCCAAA	NA	False	NA	-73	True	NA	NA	NA	145060663	145064894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145061505_145062387_145062595_145062700_145062777_145063536_145064537_145064630
ES.27747.42	chr5	+	2370	4	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	176	0	intron_retention	FALSE	canonical	3	1664	junction_2	85.9573537672413	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCCAAAACCCAAAAAAT	NA	False	NA	-69	True	NA	NA	NA	145060959	145064898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145062595_145062700_145062777_145063536_145063743_145064445
ES.27747.5	chr5	+	1486	10	FSM	ENSMUSG00000029622.17	ENSMUST00000196111.5	1394	10	-81	-11	16	-4	multi-exon	FALSE	canonical	3	7	junction_6	583.199688394301	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAACCCAAAACCCAAA	8048	False	NA	-73	True	NA	NA	NA	145051040	145064894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062688_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.6	chr5	+	1649	10	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-19	97	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	581.185952265805	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8056	False	NA	28	True	AATAAA	-14	NA	145051048	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051234_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27747.8	chr5	+	2127	9	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-5	-17	intron_retention	FALSE	canonical	3	1600	junction_4	143.563357093654	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	8070	False	NA	NA	False	AAGAAA	-29	NA	145051062	145064866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145064537_145064630
ES.27747.9	chr5	+	2346	9	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	-3	97	intron_retention	FALSE	canonical	3	1664	junction_6	124.14885218962	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGCACTC	8072	False	NA	28	True	AATAAA	-14	NA	145051064	145064995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ES.27748.1	chr5	+	4002	1	Antisense	novelGene_ENSMUSG00000029623.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAAAGCCCAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	145068755	145072757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_145068800_145072800
ES.27748.2	chr5	+	178	1	Antisense	novelGene_ENSMUSG00000029623.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTTAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	145070161	145070339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_145070200_145070300
ES.27749.1	chr5	+	1184	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	-316	-1	-316	1	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTCTTTTAAGAGTGC	NA	False	NA	21	True	AATAAA	-22	NA	145076855	145084889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ES.27749.2	chr5	+	2404	5	ISM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	-277	-35	-277	35	intron_retention	FALSE	canonical	3	705	junction_1	75.0911945570185	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCTCTGTGTTGTA	NA	False	NA	55	True	NA	NA	NA	145076894	145084923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252
ES.27749.3	chr5	+	938	5	NIC	ENSMUSG00000038722.18	novel	741	6	NA	NA	-276	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	373.836194074357	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTACATTCTTTCTTTTA	NA	False	NA	14	True	AATAAA	-15	NA	145076895	145084882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145077253_145078114_145078171_145079257_145079378_145083252_145083420_145084644
ES.27749.4	chr5	+	731	5	FSM	ENSMUSG00000038722.18	ENSMUST00000162308.8	705	5	-26	0	9	0	multi-exon	FALSE	canonical	3	10	junction_3	349.672257263856	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077180	145084884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145083252_145083420_145084644
ES.27749.5	chr5	+	743	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	-4	2	-4	1	multi-exon	FALSE	canonical	3	42	junction_2	311.754133894003	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTACATTCTTTCTTTTA	NA	False	NA	14	True	AATAAA	-15	NA	145077213	145084882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ES.27749.6	chr5	+	5384	3	NIC	ENSMUSG00000038722.18	novel	867	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	705	junction_1	94.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCTACATTCTTTCTTT	NA	False	NA	12	True	AATAAA	-13	NA	145077213	145084880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145077253_145078114_145081832_145083252
ES.27749.7	chr5	+	960	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	19	-51	19	44	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTGTAGATGCTGTG	NA	False	NA	64	True	NA	NA	NA	145077243	145084932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ES.27749.8	chr5	+	1037	7	NNC	ENSMUSG00000038722.18	novel	928	6	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	407.524811787236	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGCTACATTCTTTCTT	NA	False	NA	11	True	AATAAA	-12	NA	145077258	145084879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145083762_145083908_145084644
ES.27749.9	chr5	+	806	4	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	1876	-2	143	-1	3prime_fragment	FALSE	canonical	3	795	junction_1	40.9145450909576	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTACATTCTTTCTTTTAA	NA	False	NA	15	True	AATAAA	-16	NA	145079100	145084883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145079378_145081708_145081832_145083252_145083420_145084644
ES.2775.1	chr10	-	7377	13	FSM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	50	-2	50	2	multi-exon	FALSE	canonical	2	8	junction_7	3.73794358200097	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCATGGTGCCTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	53255993	53149536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53154341_53157444_53157677_53159932_53160041_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
ES.2775.2	chr10	-	7212	12	NIC	ENSMUSG00000038594.10	novel	7425	13	NA	NA	107	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.01567789968499	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCATGGTGCCTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	53255936	53149536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53154341_53157444_53157677_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
ES.2775.3	chr10	-	5219	2	ISM	ENSMUSG00000038594.10	ENSMUST00000220376.2	2339	12	34812	20928	34812	-20922	internal_fragment	FALSE	canonical	3	20	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	53191107	53175062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53177778_53188603
ES.2775.4	chr10	-	2320	1	FSM	ENSMUSG00000112734.2	ENSMUST00000220401.2	1794	1	-528	2	323	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53220858	53218538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53218500_53220900
ES.27750.1	chr5	-	123	1	Antisense	novelGene_ENSMUSG00000029622.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCCGGCTCACATTTGGT	NA	False	NA	NA	False	NA	NA	NA	145065128	145065005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_145065000_145065100
ES.27751.1	chr5	-	2232	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	120	1	-120	-1	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGATGCTTCTGGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	145076928	145065579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ES.27751.2	chr5	-	1526	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	-60	887	-60	428	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTGTTTGGCAGTTT	NA	False	NA	-24	True	ATTAAA	-13	NA	145077108	145066465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ES.27751.3	chr5	-	2833	1	NIC	ENSMUSG00000029623.15	novel	2353	6	NA	NA	2984	428	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTGTTTGGCAGTTT	NA	False	NA	-24	True	ATTAAA	-13	NA	145069298	145066465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_145066500_145069300
ES.27751.7	chr5	-	851	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	195	1307	-45	8	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTCTGCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	145076853	145066885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ES.27752.1	chr5	-	7173	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	40	-4126	40	4126	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTCTGATGTTC	NA	False	NA	NA	False	NA	NA	NA	145103878	145080197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ES.27752.2	chr5	-	5478	1	Genic_Genomic	ENSMUSG00000029624.11	novel	NA	NA	NA	NA	18089	4124	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTGGTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	145085677	145080199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_145080200_145085700
ES.27752.3	chr5	-	7120	9	NNC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	51	4124	intron_retention	FALSE	canonical	0	0	junction_7	35.5771608619912	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTGGTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	145103867	145080199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101910_145102344_145103763
ES.27752.4	chr5	-	3086	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	-1	2	-1	-2	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGCGTCTCATATA	NA	False	NA	0	True	AATAAA	-28	NA	145103919	145084325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ES.27752.5	chr5	-	2673	8	NNC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	2092	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.6265198254176	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	145101674	145084335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101448
ES.27752.6	chr5	-	5548	7	NIC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	1575	-12	intron_retention	FALSE	canonical	3	72	junction_4	9.32142096940638	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTTTAACTGAGTGC	NA	False	NA	-10	True	AATAAA	-18	NA	145102191	145084335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870
ES.27752.7	chr5	-	3636	8	NIC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	-65	-13	intron_retention	FALSE	canonical	3	72	junction_4	17.5243271145093	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTAGTTTTAACTGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	145103831	145084336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_145085316_145088095_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ES.27752.8	chr5	-	2572	9	NNC	ENSMUSG00000029624.11	novel	3087	9	NA	NA	41	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.3226202312343	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAGTTTTAACTGAGT	NA	False	NA	-12	True	AATAAA	-16	NA	145103877	145084337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145084856_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ES.27752.9	chr5	-	220	1	Intergenic	novelGene_23086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGCCTTAGTTACTAT	NA	False	NA	NA	False	NA	NA	NA	145092873	145092653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_145092700_145092900
ES.27753.10	chr5	+	5428	6	ISM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-10	0	-10	0	intron_retention	FALSE	canonical	3	734	junction_3	47.9391280688333	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104046	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039
ES.27753.11	chr5	+	2026	10	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	377.088554291665	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104046	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145107539_145107728_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115120_145115268_145115642_145115739_145117945
ES.27753.12	chr5	+	1934	9	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	336.628133108331	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104046	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145113519_145113763_145114039_145114113_145115642_145115739_145117945
ES.27753.13	chr5	+	1765	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	-9	0	-9	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104047	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
ES.27753.14	chr5	+	1870	9	NNC	ENSMUSG00000029625.17	novel	1713	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	333.606031682582	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104052	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145107539_145107728_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.15	chr5	+	1670	8	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	290.413217217629	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104054	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113002_145114039_145114113_145115642_145115739_145117945
ES.27753.16	chr5	+	1615	8	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	306.191350069108	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104056	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145110116_145110207_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.17	chr5	+	1024	3	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.5	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104057	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104114_145115675_145115739_145117945
ES.27753.18	chr5	+	3844	8	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	293.500060842048	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104060	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145116537_145116576
ES.27753.19	chr5	+	3204	7	NIC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	673	junction_6	62.6243207991556	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104063	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145115739_145117945
ES.27753.2	chr5	+	1626	9	NNC	ENSMUSG00000029625.17	novel	1713	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	290.029201116026	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145103995	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104045_145104157_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.21	chr5	+	5888	7	NNC	ENSMUSG00000029625.17	novel	1204	8	NA	NA	6	-2	intron_retention	FALSE	canonical	1	2	junction_5	384.293146207712	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTGTGTTTCATTACT	NA	False	NA	20	True	ATTAAA	-12	NA	145104069	145118848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104270_145107324_145107728_145110116_145112463_145112920_145113015_145113519_145113763_145114039_145115739_145117945
ES.27753.22	chr5	+	1416	6	ISM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	6092	1	2762	0	3prime_fragment	FALSE	canonical	3	267	junction_4	195.754335839593	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	5461	False	NA	22	True	ATTAAA	-14	NA	145110114	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.23	chr5	+	5113	5	NNC	ENSMUSG00000029625.17	novel	2971	6	NA	NA	2766	0	intron_retention	FALSE	non_canonical	0	0	junction_4	333.097583299549	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	5465	False	NA	23	True	ATTAAA	-15	NA	145110118	145118851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145110270_145112366_145112463_145112920_145113015_145114039_145116537_145116576
ES.27753.25	chr5	+	4739	1	Genic_Genomic	ENSMUSG00000029625.17	novel	NA	NA	NA	NA	10001	3241	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAACTACT	3063	False	NA	NA	False	NA	NA	NA	145117353	145122092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_145117400_145122100
ES.27753.26	chr5	+	1013	2	NNC	ENSMUSG00000029625.17	novel	1713	8	NA	NA	10251	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	3313	False	NA	22	True	ATTAAA	-14	NA	145117603	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145117712_145117945
ES.27753.27	chr5	+	3886	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-88	-4	-88	4	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGGTTTCTCTCTTTG	849	False	NA	14	True	ATTAAA	-19	NA	145141283	145158564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.28	chr5	+	3863	6	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-54	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	25.568730903195	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGAGGTTTCTCTCTT	883	False	NA	12	True	ATTAAA	-17	NA	145141317	145158562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145142519_145144372_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.29	chr5	+	3683	6	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	23.6101673013979	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGACTTGAGGTTTCTC	883	False	NA	8	True	ATTAAA	-13	NA	145141317	145158558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155531_145156862
ES.27753.3	chr5	+	3945	7	ISM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	-26	1	-26	0	intron_retention	FALSE	canonical	3	267	junction_6	200.926810887281	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145103996	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645
ES.27753.30	chr5	+	3794	6	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-52	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.9460979725276	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	885	False	NA	3	True	ATTAAA	-8	NA	145141319	145158553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149406_145155096_145155694_145156862
ES.27753.32	chr5	+	3826	6	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-52	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.9621957562807	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGACTTGAGGTTTCT	885	False	NA	7	True	ATTAAA	-12	NA	145141319	145158557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145142519_145144385_145144519_145148572_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.33	chr5	+	2855	6	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9460979725276	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	910	False	NA	3	True	ATTAAA	-8	NA	145141344	145158553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145141547_145144372_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.34	chr5	+	3209	5	ISM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	-16	1770	-16	1418	5prime_fragment	FALSE	canonical	3	45	junction_2	10.1365674663566	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTAGCCTTGTTCT	921	False	NA	NA	False	AATAAA	-26	NA	145141355	145156790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096
ES.27753.35	chr5	+	3672	5	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	27.2075357208256	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGACTTGAGGTTTCTC	921	False	NA	8	True	ATTAAA	-13	NA	145141355	145158558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145142519_145144385_145144519_145148555_145148639_145155096_145155694_145156862
ES.27753.37	chr5	+	2671	5	NIC	ENSMUSG00000055991.16	novel	378	4	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	28.4901298698339	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGACTTGAGGTTTCT	4932	False	NA	7	True	ATTAAA	-12	NA	145145366	145158557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145145527_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.38	chr5	+	2629	5	NIC	ENSMUSG00000055991.16	novel	378	4	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	32.5192250830182	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGGTTTCTCTCTTTG	4936	False	NA	14	True	ATTAAA	-19	NA	145145370	145158564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145145527_145148555_145148639_145149314_145149406_145155096_145155694_145156862
ES.27753.39	chr5	+	3545	2	Genic_Genomic	ENSMUSG00000055991.16	novel	3794	6	NA	NA	5466	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGACTTGAGGTTTCT	NA	False	NA	7	True	ATTAAA	-12	NA	145150843	145158557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_145152071_145156239
ES.27753.4	chr5	+	1624	9	NNC	ENSMUSG00000029625.17	novel	1756	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	275.082260424041	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104007	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104046_145104151_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ES.27753.40	chr5	+	174	1	Intergenic	novelGene_23088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	145154077	145154251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_145154100_145154300
ES.27753.41	chr5	+	2487	3	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	9358	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.5	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	NA	False	NA	3	True	ATTAAA	-8	NA	145154735	145158553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145154935_145155096_145155694_145156862
ES.27753.5	chr5	+	1713	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	-39	-287	2	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104024	145118850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ES.27753.6	chr5	+	3338	13	Fusion	ENSMUSG00000055991.16_ENSMUSG00000029625.17	novel	1387	8	NA	NA	-1	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	360.630081323724	534	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGACTTGAGGTTTCT	NA	False	NA	7	True	ATTAAA	-12	NA	145104032	145158557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_145104052_145104157_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ES.27753.7	chr5	+	1094	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	11	608	0	80	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCCTGGACATCAGTG	NA	False	NA	NA	False	AAAAAG	-37	NA	145104033	145118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.8	chr5	+	1310	6	NNC	ENSMUSG00000029625.17	novel	1713	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	314.700238322121	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGTGTTTCATTACTT	NA	False	NA	21	True	ATTAAA	-13	NA	145104037	145118849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145104129_145112407_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ES.27753.9	chr5	+	5785	6	ISM	ENSMUSG00000029625.17	ENSMUST00000160574.8	1204	8	-35	-809	9	0	intron_retention	FALSE	canonical	1	6	junction_2	310.265434749023	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104042	145118851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145104270_145107324_145107728_145110116_145110270_145112366_145112463_145112920_145113015_145114039
ES.27754.1	chr5	-	3067	1	Antisense	novelGene_ENSMUSG00000029625.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	145109862	145106795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_145106800_145109900
ES.27755.1	chr5	-	484	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	470	1	0	-1	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTGTAGTCATTGTT	9969	False	NA	-3	True	AATAAA	-24	NA	145128402	145120508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ES.27755.11	chr5	-	7171	2	ISM	ENSMUSG00000038690.16	ENSMUST00000162360.8	607	5	51	1	-13	-1	intron_retention	FALSE	canonical	3	5440	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTTGCCTGGTGTAG	8618	False	NA	-11	True	AATAAA	-16	NA	145128351	145120516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_145120678_145121341
ES.27755.2	chr5	-	2904	3	NIC	ENSMUSG00000038690.16	novel	955	4	NA	NA	-11	3	intron_retention	FALSE	canonical	3	4948	junction_2	246	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCTGGTGTAGTCAT	8620	False	NA	-7	True	AATAAA	-20	NA	145128349	145120512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_145120678_145121341_145124044_145128312
ES.27755.3	chr5	-	531	5	NNC	ENSMUSG00000038690.16	novel	607	5	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	2952.7657691561	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCTGGTGTAGTCAT	8626	False	NA	-7	True	AATAAA	-20	NA	145128343	145120512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145120678_145121341_145121459_145123935_145124044_145124654_145124765_145128312
ES.27755.4	chr5	-	3568	2	NIC	ENSMUSG00000038690.16	novel	955	4	NA	NA	-11	3	intron_retention	FALSE	canonical	3	4948	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCTGGTGTAGTCAT	8620	False	NA	-7	True	AATAAA	-20	NA	145128349	145120512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_145124044_145128312
ES.27755.5	chr5	-	555	5	FSM	ENSMUSG00000038690.16	ENSMUST00000162360.8	607	5	53	-1	-11	1	multi-exon	FALSE	canonical	3	23	junction_4	2943.81371480941	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTGCCTGGTGTAGTC	8620	False	NA	-9	True	AATAAA	-18	NA	145128349	145120514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145125002_145125133_145128312
ES.27755.6	chr5	-	7847	1	FSM	ENSMUSG00000038690.16	ENSMUST00000200584.2	2101	1	-24	-5722	-24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8607	False	NA	-10	True	AATAAA	-17	NA	145128362	145120515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145120500_145128400
ES.27755.7	chr5	-	603	5	NNC	ENSMUSG00000038690.16	novel	607	5	NA	NA	-25	-1	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_3	2450.4166992575	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTTGCCTGGTGTAG	8606	False	NA	-11	True	AATAAA	-16	NA	145128363	145120516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145120678_145121341_145121459_145122512_145122679_145123935_145124044_145128312
ES.27755.8	chr5	-	474	5	FSM	ENSMUSG00000038690.16	ENSMUST00000037056.9	540	5	68	-2	4	-1	multi-exon	FALSE	canonical	2	3	junction_4	2948.80004196622	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTTGCCTGGTGTAG	8635	False	NA	-11	True	AATAAA	-16	NA	145128334	145120516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145125002_145125069_145128312
ES.27755.9	chr5	-	310	3	NNC	ENSMUSG00000038690.16	novel	955	4	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2474	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCTTGCCTGGTGTAG	8620	False	NA	-11	True	AATAAA	-16	NA	145128349	145120516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145120678_145123931_145124044_145128312
ES.27756.1	chr5	-	201	1	Intergenic	novelGene_23087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTGGAGAGATGGCTC	8860	False	NA	NA	False	NA	NA	NA	145129511	145129310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_145129300_145129500
ES.27757.1	chr5	-	1961	4	NNC	ENSMUSG00000029627.13	novel	1967	3	NA	NA	-2206	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8.52447456836295	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTTGTGATTGTTCA	NA	False	NA	NA	False	NA	NA	NA	145140884	145131770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145133010_145135486_145135611_145138089_145138521_145140717
ES.27757.3	chr5	-	1616	4	NNC	ENSMUSG00000029627.13	novel	1967	3	NA	NA	-2206	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.42809041582063	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTTTGTTGTGATTGT	NA	False	NA	NA	False	NA	NA	NA	145140884	145131773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_145133010_145135486_145135611_145139430_145139520_145140717
ES.27758.1	chr5	+	4143	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-34	-5	-26	5	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTGTTTTGAGCCAAG	1265	False	NA	21	True	NA	NA	NA	145168498	145184117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ES.27758.10	chr5	+	4293	5	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	195.054319357455	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1299	False	NA	12	True	NA	NA	NA	145168532	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145173859_145174053_145179729_145179835_145180384
ES.27758.11	chr5	+	4299	6	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	186.469300422348	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTGTTTTGAGCCA	1305	False	NA	19	True	NA	NA	NA	145168538	145184115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172546_145172674_145173859_145173931_145179729_145179835_145180384
ES.27758.12	chr5	+	3938	3	NIC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	173	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTCTTTGTTTTGAGCC	1305	False	NA	18	True	NA	NA	NA	145168538	145184114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145168642_145179729_145179835_145180384
ES.27758.13	chr5	+	2797	5	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	4	-1489	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	195.054319357455	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATTCTTATTCACAG	1309	False	NA	2	True	ATTAAA	-17	NA	145168542	145182622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145173859_145174053_145179729_145179835_145180384
ES.27758.14	chr5	+	2065	5	NNC	ENSMUSG00000007812.17	novel	1765	5	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	177.017477950625	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCACTTGTGTACTTT	1313	False	NA	NA	False	AATACA	-10	NA	145168546	145174652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173057
ES.27758.16	chr5	+	1742	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	24	-1	10	1	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGCTTGATGTCTTGG	1315	False	NA	NA	False	AATAAA	-17	NA	145168548	145175133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
ES.27758.17	chr5	+	2684	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-16	1489	10	-1489	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATTCTTATTCACAG	1315	False	NA	2	True	ATTAAA	-17	NA	145168548	145182622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
ES.27758.18	chr5	+	4501	2	ISM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	10	0	10	0	intron_retention	FALSE	canonical	3	447	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1315	False	NA	NA	False	AATACA	-16	NA	145168548	145174658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145168642_145170250
ES.27758.19	chr5	+	4375	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	149.525917485899	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTCTTTGTTTTGAGCC	1316	False	NA	18	True	NA	NA	NA	145168549	145184114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168928_145170250_145170413_145179729_145179835_145180384
ES.27758.2	chr5	+	2620	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	-22	-1489	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	142.113413238238	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATTCTTATTCACAG	1269	False	NA	2	True	ATTAAA	-17	NA	145168502	145182622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170274_145170413_145179729_145179835_145180384
ES.27758.20	chr5	+	3313	3	NIC	ENSMUSG00000007812.17	novel	1150	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	55	junction_2	196	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1317	False	NA	NA	False	AATACA	-16	NA	145168550	145174658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145168642_145170250_145172674_145173859
ES.27758.21	chr5	+	1136	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	15	-1	-11	1	multi-exon	FALSE	canonical	2	3	junction_3	192.902969276151	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTACTTTTTGTAGT	1320	False	NA	NA	False	AATACA	-17	NA	145168553	145174659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
ES.27758.22	chr5	+	4298	6	NIC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	175.761656796925	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTCTTTGTTTTGAGCC	1320	False	NA	18	True	NA	NA	NA	145168553	145184114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145179729_145179835_145180384
ES.27758.23	chr5	+	4743	5	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-11	572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	201.624031305794	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTTCGGTCTTGGGGG	1320	False	NA	NA	False	AATAAA	-16	NA	145168553	145184684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145179356_145179445_145179729_145179835_145180384
ES.27758.24	chr5	+	2914	6	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-11	-1488	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	185.368174183164	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTCTTATTCACAGT	1320	False	NA	3	True	ATTAAA	-18	NA	145168553	145182623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172546_145172674_145173859_145174053_145179729_145179835_145180384
ES.27758.25	chr5	+	4377	7	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.629977193214	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1320	False	NA	12	True	NA	NA	NA	145168553	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172532_145172674_145173859_145173931_145179729_145179835_145180384
ES.27758.26	chr5	+	4072	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	184.489084290161	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACTCTTTGTTTTGAGC	1320	False	NA	17	True	NA	NA	NA	145168553	145184113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145179729_145179823_145180384
ES.27758.27	chr5	+	4151	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	-11	23117	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	210.717820793591	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTTGATTATGGTG	1320	False	NA	NA	False	NA	NA	NA	145168553	145207229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145203118_145204175_145204384
ES.27758.28	chr5	+	4404	8	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.362279869162	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1322	False	NA	12	True	NA	NA	NA	145168555	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170286_145170364_145170413_145172115_145172202_145172546_145172674_145173859_145174053_145179729_145179835_145180384
ES.27758.29	chr5	+	545	5	NNC	ENSMUSG00000007812.17	novel	1765	5	NA	NA	-8	-950	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	177.017477950625	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAGGCTAAAATCTC	1323	False	NA	NA	False	ATTAAA	-12	NA	145168556	145173142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173057
ES.27758.3	chr5	+	2642	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-25	1487	-17	-1486	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTTATTCACAGTTT	1274	False	NA	5	True	ATTAAA	-20	NA	145168507	145182625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ES.27758.30	chr5	+	2864	7	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	0	-1489	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	169.56676823272	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATTCTTATTCACAG	1333	False	NA	2	True	ATTAAA	-17	NA	145168566	145182622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859_145173931_145179729_145179835_145180384
ES.27758.31	chr5	+	4353	7	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	169.56676823272	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTTGTTTTGAGCCA	1337	False	NA	19	True	NA	NA	NA	145168570	145184115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859_145173931_145179729_145179835_145180384
ES.27758.32	chr5	+	4041	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	142.113413238238	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTGTTTTGAGCCAAG	1343	False	NA	21	True	NA	NA	NA	145168576	145184117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170274_145170413_145179729_145179835_145180384
ES.27758.33	chr5	+	2802	4	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	62	-1491	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	149.525917485899	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGATTCTTATTCAC	1395	False	NA	0	True	ATTAAA	-15	NA	145168628	145182620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168928_145170250_145170413_145179729_145179835_145180384
ES.27758.34	chr5	+	4005	3	ISM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	1704	4	1670	-3	3prime_fragment	FALSE	canonical	3	281	junction_1	33	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	3003	False	NA	12	True	NA	NA	NA	145170236	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145170413_145179729_145179835_145180384
ES.27758.35	chr5	+	2872	3	NIC	ENSMUSG00000007812.17	novel	1765	5	NA	NA	1689	0	intron_retention	FALSE	canonical	3	46	junction_1	4.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	3022	False	NA	NA	False	AATACA	-16	NA	145170255	145174658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145172202_145172546_145172674_145173859
ES.27758.36	chr5	+	10187	2	ISM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	3356	1487	3322	-1486	3prime_fragment	FALSE	canonical	3	347	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTTATTCACAGTTT	4655	False	NA	5	True	ATTAAA	-20	NA	145171888	145182625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145179835_145180384
ES.27758.37	chr5	+	5570	3	NNC	ENSMUSG00000007812.17	novel	601	3	NA	NA	4831	-1491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGGATTCTTATTCAC	6164	False	NA	0	True	ATTAAA	-15	NA	145173397	145182620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145175978_145179080_145179835_145180384
ES.27758.38	chr5	+	4574	2	ISM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	10420	3	10418	-3	3prime_fragment	FALSE	canonical	3	347	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	NA	False	NA	12	True	NA	NA	NA	145178984	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_145179835_145180384
ES.27758.39	chr5	+	5274	2	NNC	ENSMUSG00000007812.17	novel	4104	4	NA	NA	12072	4089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTTCTTGCCTTCCCCT	NA	False	NA	NA	False	AATAAA	-13	NA	145180638	145188201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145185073_145187361
ES.27758.4	chr5	+	4445	6	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	185.368174183164	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTAGACTCTTTGTTT	1274	False	NA	12	True	NA	NA	NA	145168507	145184108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170250_145170413_145172546_145172674_145173859_145174053_145179729_145179835_145180384
ES.27758.40	chr5	+	5138	1	Intergenic	novelGene_23089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTTGGGCAGTGTCA	NA	False	NA	NA	False	AATAAA	-23	NA	145194074	145199212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_145194100_145199200
ES.27758.5	chr5	+	2086	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	-17	2035	-9	-2034	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGTTCAGTGTCAAA	1282	False	NA	NA	False	AGTAAA	-40	NA	145168515	145182077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ES.27758.6	chr5	+	2689	5	NNC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	-5	-1489	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	133.982041707088	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATTCTTATTCACAG	1286	False	NA	2	True	ATTAAA	-17	NA	145168519	145182622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145168642_145170274_145170413_145172115_145172202_145179729_145179835_145180384
ES.27758.7	chr5	+	1079	3	FSM	ENSMUSG00000007812.17	ENSMUST00000199003.5	601	3	-42	-436	-1	0	multi-exon	FALSE	canonical	3	21	junction_2	213	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1290	False	NA	NA	False	AATACA	-16	NA	145168523	145174658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145173859
ES.27758.8	chr5	+	4205	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	-41	-7	-1	6	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGTTTTGAGCCAAGT	1290	False	NA	22	True	NA	NA	NA	145168523	145184118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
ES.27758.9	chr5	+	1367	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	2	396	2	78	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTTATCTTGTCAT	1293	False	NA	NA	False	NA	NA	NA	145168526	145174736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
ES.27759.1	chr5	-	2469	1	Antisense	novelGene_ENSMUSG00000007812.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTGAAGGTGGTAGTA	NA	False	NA	NA	False	NA	NA	NA	145172441	145169972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_145170000_145172400
ES.2776.1	chr10	+	174	1	Intergenic	novelGene_2119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	53267750	53267924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_53267800_53267900
ES.27760.1	chr5	-	3374	1	Antisense	novelGene_ENSMUSG00000007812.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-28	NA	145177118	145173744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_145173700_145177100
ES.27761.1	chr5	-	179	1	Intergenic	novelGene_23090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAAAAAAGGGGGGC	NA	False	NA	NA	False	NA	NA	NA	145215038	145214859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_145214900_145215000
ES.27762.1	chr5	+	2922	6	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-34	964	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	6.67532770731145	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACTTTCCTGTAAATTC	2739	False	NA	11	True	AATAAA	-24	NA	145217275	145229052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
ES.27762.2	chr5	+	2883	6	NIC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	-19	967	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	14.7431339951857	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTCCTGTAAATTCCTG	2754	False	NA	14	True	AATAAA	-27	NA	145217290	145229055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145217438_145220188_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
ES.27762.3	chr5	+	2786	17	Fusion	ENSMUSG00000070420.5_ENSMUSG00000070419.12	novel	1796	5	NA	NA	11	-2	multi-exon	FALSE	canonical	0	0	junction_5	21.9687277738152	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGTGATGTACTTTT	2784	False	NA	NA	False	CATAAA	-11	NA	145217320	145327734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145277510_145277699_145286136_145286231_145298866_145298920_145302423_145302524_145305835_145305950_145307443_145307533_145307766_145307916_145309391_145309462_145311040_145311108_145318046_145318274_145323767_145323931_145327226
ES.27762.4	chr5	+	2631	5	NIC	ENSMUSG00000070420.5	novel	1799	5	NA	NA	32	964	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	23.4773827331754	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACTTTCCTGTAAATTC	2805	False	NA	11	True	AATAAA	-24	NA	145217341	145229052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_145217438_145220188_145220595_145224117_145224210_145225103_145225228_145227139
ES.27762.5	chr5	+	2653	5	NNC	ENSMUSG00000070420.5	novel	1799	5	NA	NA	33	960	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	22.9387772123974	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTAACTTTCCTGTAA	2806	False	NA	7	True	AATAAA	-20	NA	145217342	145229048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145217438_145220161_145220595_145224117_145224210_145225103_145225228_145227139
ES.27762.6	chr5	+	2486	6	NNC	ENSMUSG00000070420.5	novel	1796	5	NA	NA	41	603	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	6.67532770731145	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCCTTGGGAATGGAA	2814	False	NA	NA	False	NA	NA	NA	145217350	145228691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
ES.27762.7	chr5	+	4453	6	Fusion	ENSMUSG00000070420.5_ENSMUSG00000104682.2	novel	1796	5	NA	NA	48	-1153	multi-exon	FALSE	canonical	3	40	junction_2	6.67532770731145	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCTTAAGGGAAAAA	2821	False	NA	NA	False	NA	NA	NA	145217357	145230665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_145217438_145220161_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
ES.27762.8	chr5	+	215	1	Intergenic	novelGene_23091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCCTCCCTCCCTTTC	8010	False	NA	NA	False	NA	NA	NA	145222546	145222761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_145222500_145222800
ES.27762.9	chr5	+	1553	2	Genic_Genomic	ENSMUSG00000104682.2	novel	2239	1	NA	NA	-3111	-1152	multi-exon	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCTTAAGGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145226468	145230666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_145226540_145229184
ES.27763.1	chr5	-	3462	4	Genic_Genomic	ENSMUSG00000104636.2	novel	201	1	NA	NA	-9429	5167	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAGGCAAAA	7341	False	NA	NA	False	NA	NA	NA	145974129	145959332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_145962383_145963597_145963739_145964447_145964521_145973931
ES.27764.1	chr5	+	172	1	Intergenic	novelGene_23092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAACCTGGGTTCCTATG	8479	False	NA	NA	False	NA	NA	NA	146087735	146087907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146087700_146087900
ES.27765.1	chr5	-	4869	1	FSM	ENSMUSG00000105636.2	ENSMUST00000199177.2	1539	1	-574	-2756	-574	2756	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146142173	146137304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146137300_146142200
ES.27766.1	chr5	-	3356	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	95	1	-42	-1	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGCAAACTTATTT	2276	False	NA	NA	False	ATTAAA	-27	NA	146158270	146146002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ES.27766.10	chr5	-	2570	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	120	762	-17	3	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTTAAAATGTTTTTA	2301	False	NA	NA	False	AGTAAA	-27	NA	146158245	146146763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ES.27766.11	chr5	-	2217	5	NNC	ENSMUSG00000029634.16	novel	2388	5	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.5269428814783	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACCAAATAACCTTTAA	2777	False	NA	NA	False	AGTAAA	-17	NA	146157769	146146773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146148743_146152906_146153003_146154857_146154907_146157211_146157295_146157749
ES.27766.3	chr5	-	3406	6	FSM	ENSMUSG00000029634.16	ENSMUST00000161574.8	909	6	-14	-2483	-14	-1	multi-exon	FALSE	canonical	1	2	junction_4	51.6704944818607	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGCAAACTTATTT	2304	False	NA	NA	False	ATTAAA	-27	NA	146158242	146146002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146156074_146156153_146157211_146157295_146158029
ES.27766.4	chr5	-	3323	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	-44	-3	1	-1	multi-exon	FALSE	canonical	1	2	junction_4	52.1488254901297	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGCAAACTTATTT	2791	False	NA	NA	False	ATTAAA	-27	NA	146157755	146146002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
ES.27766.6	chr5	-	3338	5	NNC	ENSMUSG00000029634.16	novel	3276	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	51.2859629918363	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2322	False	NA	NA	False	ATTAAA	-24	NA	146158224	146146005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157998
ES.27766.7	chr5	-	3166	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	-17	-761	-17	0	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2743	False	NA	NA	False	ATTAAA	-24	NA	146157803	146146005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
ES.27766.8	chr5	-	3221	6	FSM	ENSMUSG00000029634.16	ENSMUST00000159074.3	542	6	-26	-2653	2	-4	multi-exon	FALSE	canonical	1	2	junction_4	52.4610331579545	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAAAGACTGTGTGCAAA	2762	False	NA	NA	False	ATTAAA	-20	NA	146157784	146146009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146156074_146156153_146157211_146157295_146157749
ES.27766.9	chr5	-	3421	6	NNC	ENSMUSG00000029634.16	novel	909	6	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	56.4326146833549	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACACTAAAGACTGTGTG	2309	False	NA	NA	False	ATTAAA	-16	NA	146158237	146146013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146148743_146152906_146153003_146154710_146154907_146156074_146156153_146157211_146157295_146157998
ES.27767.1	chr5	+	2390	12	NNC	ENSMUSG00000029635.16	novel	1976	6	NA	NA	-301	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.6060843917913	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	AATAAA	-18	NA	146167738	146239682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146167835_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.10	chr5	+	2948	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-90	115	-32	-60	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACGTACTGTATCAAACT	NA	False	NA	NA	False	AATAAA	-13	NA	146168007	146239569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.11	chr5	+	2519	13	FSM	ENSMUSG00000029635.16	ENSMUST00000161181.8	2467	13	-52	0	-32	0	multi-exon	FALSE	canonical	2	5	junction_1	40.014580675882	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAGGTGTTATGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	146168007	146239641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.12	chr5	+	5443	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-6	0	intron_retention	FALSE	canonical	2	6	junction_5	33.3151741170038	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168033	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.13	chr5	+	2476	12	NNC	ENSMUSG00000029635.16	novel	2973	12	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.9336567937529	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATGTATGGTGTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	146168040	146239677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236504_146236661_146238385
ES.27767.14	chr5	+	2379	12	NNC	ENSMUSG00000029635.16	novel	2467	13	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.9821526538449	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTATGGTGTCAACTA	NA	False	NA	NA	False	AATAAA	-16	NA	146168051	146239680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235618_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.15	chr5	+	2439	2	ISM	ENSMUSG00000029635.16	ENSMUST00000159467.2	654	4	-142	10299	-7	1378	5prime_fragment	FALSE	canonical	3	93	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	146168052	146198175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146168631_146196314
ES.27767.16	chr5	+	3024	13	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.9589454933679	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168052	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168631_146196314_146196391_146199527_146199678_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.17	chr5	+	2964	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	39.0799572102575	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168052	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205097_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.18	chr5	+	2969	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	30.8661987005563	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATGGTGTCAACTATA	NA	False	NA	NA	False	AATAAA	-18	NA	146168060	146239682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205097_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.19	chr5	+	2990	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	31.927870096342	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTATGGTGTCAACTA	NA	False	NA	NA	False	AATAAA	-16	NA	146168061	146239680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.2	chr5	+	2970	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146167956	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.20	chr5	+	2974	13	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	41.2529460227455	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATGTATGGTGTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	146168073	146239677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229463_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236487_146236661_146238385
ES.27767.21	chr5	+	2635	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	122	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	33.8645820490283	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCAATGTATGGTGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	146168316	146239676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.22	chr5	+	7054	4	NNC	ENSMUSG00000029635.16	novel	654	4	NA	NA	123	-5323	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	43.8406204335659	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGGGGAGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	146168317	146203151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168631_146196314_146197877_146197924_146199376_146199423
ES.27767.23	chr5	+	422	1	Intergenic	novelGene_23095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAAGTTCTCCACTTTG	NA	False	NA	NA	False	NA	NA	NA	146180753	146181175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146180800_146181200
ES.27767.24	chr5	+	1959	8	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-2548	-7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	43.5149516879907	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATGTATGGTGTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	146220437	146239677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236504_146236661_146238385
ES.27767.25	chr5	+	4114	7	ISM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	59144	0	4256	0	3prime_fragment	FALSE	canonical	3	79	junction_1	20.0118020733322	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146227241	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.26	chr5	+	6224	6	FSM	ENSMUSG00000029635.16	ENSMUST00000159615.2	1976	6	-4193	-55	-4193	0	multi-exon	FALSE	canonical	3	84	junction_4	17.7831380807775	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146227526	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.3	chr5	+	3104	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	-131	0	-73	0	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146167966	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.4	chr5	+	3254	14	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.0976618421461	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146167966	146239684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168631_146196314_146196391_146199527_146199678_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.5	chr5	+	2456	12	NIC	ENSMUSG00000029635.16	novel	2467	13	NA	NA	-59	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	37.5886830164225	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTATGGTGTCAACTA	NA	False	NA	NA	False	AATAAA	-16	NA	146167980	146239680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27767.6	chr5	+	2917	12	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-56	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.617642523199	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTGTTATGTAATAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	146167983	146239646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236399_146236501_146236661_146238385
ES.27767.8	chr5	+	3007	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	-44	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	32.380120787641	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTGTTATGTAATAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	146167995	146239646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229463_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ES.27768.1	chr5	-	5363	1	Intergenic	novelGene_23093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGAGGAGGAGG	3073	False	NA	NA	False	NA	NA	NA	146182243	146176880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146176900_146182200
ES.27768.2	chr5	-	172	1	Intergenic	novelGene_23094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGGAAGGAAGGAAGGAA	6380	False	NA	NA	False	NA	NA	NA	146178936	146178764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146178800_146178900
ES.27769.1	chr5	-	186	1	Intergenic	novelGene_23096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACTGGCTGGTTCAC	NA	False	NA	NA	False	NA	NA	NA	146266646	146266460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146266500_146266600
ES.2777.1	chr10	+	1251	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	8	596	8	-596	multi-exon	FALSE	canonical	3	22	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTAACTCTATCATC	5702	False	NA	NA	False	AATAAA	-19	NA	53285985	53299772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53286053_53297604_53297685_53298668
ES.2777.2	chr10	+	4759	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	9	-2913	9	2913	multi-exon	FALSE	canonical	3	22	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAACTGAGCTGGGGAT	5703	False	NA	NA	False	TATAAA	-7	NA	53285986	53303281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53286053_53297604_53297685_53298668
ES.2777.3	chr10	+	4320	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	18	-2483	18	2483	multi-exon	FALSE	canonical	3	22	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCACAACTGTCATTGT	5712	False	NA	NA	False	NA	NA	NA	53285995	53302851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53286053_53297604_53297685_53298668
ES.27770.1	chr5	-	199	1	Intergenic	novelGene_23097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTCAACTCCCAA	NA	False	NA	NA	False	NA	NA	NA	146269148	146268949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146268900_146269100
ES.27771.1	chr5	+	4954	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	242	0	242	0	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322036	146410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.10	chr5	+	3198	13	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	306	2263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.5941014491918	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTCTGGATTTGTTGA	NA	False	NA	10	True	NA	NA	NA	146322100	146407329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146398871_146399426_146399611_146401592_146401723_146402659_146402830_146403607_146403875_146405024_146405390_146407029
ES.27771.12	chr5	+	4748	10	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	313	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.3866290622094	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146322107	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397817_146403607_146403875_146405024_146405390_146407029
ES.27771.14	chr5	+	4821	11	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	319	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	42.2952716033365	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146322113	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029_146409740_146409794
ES.27771.15	chr5	+	4842	9	ISM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	36932	1	-33692	-1	3prime_fragment	FALSE	canonical	3	111	junction_3	17.414074767268	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146358726	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.16	chr5	+	4476	6	ISM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	68330	1	-2294	-1	3prime_fragment	FALSE	canonical	3	111	junction_5	16.2603812993423	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	4837	False	NA	14	True	AATAAA	-18	NA	146390124	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.17	chr5	+	3760	2	ISM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	83229	2	12605	-2	3prime_fragment	FALSE	canonical	3	111	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTTCTGCTTATTTA	NA	False	NA	13	True	AATAAA	-17	NA	146405023	146410423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146405390_146407029
ES.27771.18	chr5	+	4157	1	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	13848	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTTCTGCTTATTTA	NA	False	NA	13	True	AATAAA	-17	NA	146406266	146410423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146406300_146410400
ES.27771.2	chr5	+	1849	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	256	3091	256	2268	multi-exon	FALSE	canonical	3	97	junction_1	19.5037191768236	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGATTTGTTGAGTATT	NA	False	NA	15	True	NA	NA	NA	146322050	146407334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.3	chr5	+	4762	9	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	257	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	46.4569693372265	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146322051	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146403607_146403875_146405024_146405390_146407029
ES.27771.4	chr5	+	2220	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	263	2713	263	2646	multi-exon	FALSE	canonical	3	97	junction_1	19.5037191768236	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGTGTACGATCGT	NA	False	NA	NA	False	AATGAA	-38	NA	146322057	146407712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.5	chr5	+	4836	9	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	272	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.7058615165163	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322066	146410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146322149_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.6	chr5	+	4928	10	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	283	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	60.1553544305631	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTCTGCTTATTTAT	NA	False	NA	14	True	AATAAA	-18	NA	146322077	146410424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146392353_146392472_146397774_146397951_146402659_146402830_146403607_146403875_146405024_146405390_146407029
ES.27771.7	chr5	+	4907	10	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	283	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	55.5139844465861	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322077	146410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146402659_146402830_146403607_146403875_146405024_146405390_146407029
ES.27771.8	chr5	+	4972	10	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	283	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.3866290622094	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322077	146410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146322149_146358727_146358875_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ES.27771.9	chr5	+	3955	6	NNC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	284	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	52.9883005955088	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTTCTGCTTATTTA	NA	False	NA	13	True	AATAAA	-17	NA	146322078	146410423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388806_146405254_146405390_146407029
ES.27772.1	chr5	-	1504	2	FSM	ENSMUSG00000041468.8	ENSMUST00000197825.2	580	2	-21	-903	-21	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGGAGAAGGAAATACT	NA	False	NA	NA	False	AATAAA	-16	NA	146521674	146519561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146520936_146521544
ES.27773.1	chr5	+	156	1	Intergenic	novelGene_23098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	146580947	146581103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146580900_146581100
ES.27774.1	chr5	+	151	1	Intergenic	novelGene_23099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATATATTTT	NA	False	NA	NA	False	NA	NA	NA	146599599	146599750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146599600_146599800
ES.27775.1	chr5	+	181	1	Intergenic	novelGene_23100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	146601233	146601414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146601200_146601400
ES.27776.1	chr5	-	219	1	Intergenic	novelGene_23101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTCTTGGGTTTTC	8813	False	NA	NA	False	TATAAA	-28	NA	146646794	146646575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146646600_146646800
ES.27777.1	chr5	+	6083	1	Intergenic	novelGene_23102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	146678845	146684928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146678800_146684900
ES.27777.2	chr5	+	1960	1	Intergenic	novelGene_23103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAAGGGGGAGCTTATT	NA	False	NA	NA	False	NA	NA	NA	146684395	146686355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146684400_146686400
ES.27778.1	chr5	+	169	1	Intergenic	novelGene_23104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	146702669	146702838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146702700_146702800
ES.27779.1	chr5	-	4145	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	-28	4	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	96.469726667309	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTTTCCTTTTGCCC	1094	False	NA	NA	False	NA	NA	NA	146731844	146671614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
ES.27779.10	chr5	-	4342	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	142	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.176536591177	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGGTTTTTAACTATA	1264	False	NA	NA	False	NA	NA	NA	146731674	146671633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146681074_146681247_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.12	chr5	-	4055	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	214	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.8981250400825	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGGTTTTTAACTAT	1336	False	NA	NA	False	NA	NA	NA	146731602	146671634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146672581_146672622_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.14	chr5	-	6838	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	-40	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.039690047517	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTGGTTTTTAACTA	1082	False	NA	NA	False	NA	NA	NA	146731856	146671635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146685155_146685327_146688504_146688589_146688702_146688780_146688862_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.15	chr5	-	4165	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	3	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	90.8981250400825	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTGGTTTTTAACTA	1125	False	NA	NA	False	NA	NA	NA	146731813	146671635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424_146731527_146731668
ES.27779.16	chr5	-	3897	8	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	180	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	125.834358242436	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTTGTGCTTGTTGGT	1302	False	NA	NA	False	NA	NA	NA	146731636	146671644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688514_146688589_146688702_146688780_146691179_146691410_146705746_146705828_146731424
ES.27779.17	chr5	-	4037	9	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	196	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.592805037827	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTATTTGTGCTTGT	1318	False	NA	NA	False	NA	NA	NA	146731620	146671648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691243_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.18	chr5	-	4276	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.176536591177	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGCTTATTTGTGCT	1311	False	NA	NA	False	NA	NA	NA	146731627	146671651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146685155_146685327_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.2	chr5	-	4031	7	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	103.428585131105	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTTTTTTCCTTTTG	1124	False	NA	NA	False	NA	NA	NA	146731814	146671617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146731424
ES.27779.20	chr5	-	3852	8	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	208	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	125.600110490007	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTGGCTTATTTGTGC	1330	False	NA	NA	False	NA	NA	NA	146731608	146671652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691198_146691410_146705746_146705828_146731424
ES.27779.22	chr5	-	2794	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	134	1399	134	-1369	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTTTTTGTGC	1256	False	NA	NA	False	ACTAAA	-25	NA	146731682	146673017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.23	chr5	-	1536	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	173	2618	173	-2588	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCGTGTAAAGCAGCT	1295	False	NA	NA	False	AGTAAA	-13	NA	146731643	146674236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.3	chr5	-	4359	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	-32	0	-32	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTTTTTTTTCCTTTT	1090	False	NA	NA	False	NA	NA	NA	146731848	146671618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.4	chr5	-	4083	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	165	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	102.567648159542	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTTTTTTTTCCTTTT	1287	False	NA	NA	False	NA	NA	NA	146731651	146671618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146674591_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.5	chr5	-	4874	9	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	231	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	93.1677754108147	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATACTTTTTTTTCCTT	1353	False	NA	NA	False	NA	NA	NA	146731585	146671620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146690399_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.6	chr5	-	4382	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	66	-12	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	113.432309722093	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTTTAACTATACTT	1188	False	NA	NA	False	NA	NA	NA	146731750	146671630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146690399_146690533_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.7	chr5	-	6700	8	NIC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	14	-13	intron_retention	FALSE	canonical	3	222	junction_1	40.3408943269983	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTTTTTAACTATACT	1136	False	NA	NA	False	NA	NA	NA	146731802	146671631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146691410_146700010_146700225_146705746_146705828_146731424
ES.27779.8	chr5	-	4541	11	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	154	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	125.564485424821	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGTTTTTAACTATAC	1276	False	NA	NA	False	NA	NA	NA	146731662	146671632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146688862_146689112_146690399_146690533_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ES.2778.1	chr10	-	179	1	Intergenic	novelGene_2120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	53324580	53324401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_53324400_53324600
ES.27780.1	chr5	+	810	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	18	1028	18	18	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTAGTGTGGGGTTTG	NA	False	NA	20	True	AATAAA	-34	NA	146769717	146772814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.10	chr5	+	1012	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5857.52873564346	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGTGAAGTGTTTTCC	NA	False	NA	-2	True	AATAAA	-12	NA	146769981	146772792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146770377_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.11	chr5	+	2393	2	FSM	ENSMUSG00000077185.3_ENSMUSG00000041453.13	ENSMUST00000135345.2	632	2	-1762	1	242	0	multi-exon	FALSE	canonical	3	8667	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146770253	146772795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146772525_146772673
ES.27780.12	chr5	+	1575	5	ISM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	1291	2	-3	-2	3prime_fragment	FALSE	canonical	3	8667	junction_4	2022.40209899021	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTGTTAGTGATGG	NA	False	NA	NA	False	ATTAAA	-17	NA	146770990	146773840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.2	chr5	+	1630	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	222	4	-34	-4	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTGTTTTGTTAGTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	146769921	146773838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.3	chr5	+	1568	5	NIC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	-1	1	intron_retention	FALSE	canonical	3	8667	junction_4	2022.40209899021	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGTGTTTTCCTTAGA	NA	False	NA	3	True	AATAAA	-17	NA	146769954	146772797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.4	chr5	+	1039	5	NIC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	2	5	intron_retention	FALSE	canonical	3	6955	junction_1	2767.33775495511	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTCCTTAGACTGT	NA	False	NA	7	True	AATAAA	-21	NA	146769957	146772801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146769982_146770993_146771073_146771257_146771915_146772373_146772525_146772673
ES.27780.5	chr5	+	641	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	5852.7472585293	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769960	146772795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146769982_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.6	chr5	+	2650	2	FSM	ENSMUSG00000041453.13_ENSMUSG00000077564.3	ENSMUST00000151871.2	596	2	-1033	-1021	5	0	multi-exon	FALSE	canonical	3	12138	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769960	146772795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146771073_146771257
ES.27780.7	chr5	+	1131	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	-51	-13	5	13	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAGACTGTAGTGTGGG	NA	False	NA	15	True	AATAAA	-29	NA	146769960	146772809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.8	chr5	+	931	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	-32	0	17	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146769972	146772795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ES.27780.9	chr5	+	2208	3	NIC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	23	-1	intron_retention	FALSE	canonical	3	8667	junction_2	2651.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGAAGTGTTTTCCTT	NA	False	NA	0	True	AATAAA	-14	NA	146769978	146772794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146771915_146772373_146772525_146772673
ES.27781.1	chr5	-	3100	2	Antisense	novelGene_ENSMUSG00000077564.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGACTTCTAGAACCACA	NA	False	NA	NA	False	NA	NA	NA	146774482	146771233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_146772522_146772670
ES.27782.1	chr5	-	176	1	Intergenic	novelGene_23105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGT	1259	False	NA	NA	False	NA	NA	NA	146793746	146793570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146793600_146793700
ES.27783.1	chr5	-	178	1	Intergenic	novelGene_23106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAATTTGAATCTAT	NA	False	NA	NA	False	NA	NA	NA	146804089	146803911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146803900_146804100
ES.27784.1	chr5	+	198	1	Intergenic	novelGene_23107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	146829174	146829372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146829200_146829400
ES.27785.1	chr5	-	222	1	Intergenic	novelGene_23108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTAAGTTATTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	146854590	146854368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146854400_146854600
ES.27786.1	chr5	-	175	1	Intergenic	novelGene_23109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	146860190	146860015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146860000_146860200
ES.27787.1	chr5	+	218	1	Intergenic	novelGene_23110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTGGTTTGCTAAA	NA	False	NA	NA	False	NA	NA	NA	146870894	146871112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_146870900_146871100
ES.27788.1	chr5	-	157	1	Intergenic	novelGene_23111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	146873716	146873559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146873600_146873700
ES.27789.1	chr5	+	1481	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	-56	1	-8	-1	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	146885458	146892415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ES.27789.10	chr5	+	4056	6	NNC	ENSMUSG00000016503.19	novel	1678	7	NA	NA	-12	3	intron_retention	FALSE	canonical	0	0	junction_5	208.845780421822	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGACTCTTTGCTGTTTCC	NA	False	NA	18	True	ATTAAA	-18	NA	146885495	146892419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890123_146890657
ES.27789.14	chr5	+	3325	7	NIC	ENSMUSG00000016503.19	novel	1298	9	NA	NA	34	-1	intron_retention	FALSE	canonical	3	398	junction_6	60.4412019146616	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGCTGTTTCCGTCG	NA	False	NA	22	True	ATTAAA	-22	NA	146885548	146892423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ES.27789.18	chr5	+	1861	7	FSM	ENSMUSG00000016503.19	ENSMUST00000133296.2	1678	7	-181	-2	-181	-1	multi-exon	FALSE	canonical	3	430	junction_1	53.3315103855122	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	146886635	146892415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ES.27789.19	chr5	+	1520	4	NNC	ENSMUSG00000016503.19	novel	1678	7	NA	NA	5017	8268	intron_retention	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	146891833	146900692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146892626_146893595_146893758_146895637_146896086_146900574
ES.27789.2	chr5	+	1305	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	-8	1	-8	-1	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGCTGTTTCCGTCG	NA	False	NA	22	True	ATTAAA	-22	NA	146885458	146892423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ES.27789.3	chr5	+	3583	6	NIC	ENSMUSG00000016503.19	novel	1298	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	437	junction_4	49.7554017167985	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	146885466	146892415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ES.27789.5	chr5	+	1172	8	NIC	ENSMUSG00000016503.19	novel	1298	9	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	179.421974401017	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	146885482	146892415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146885786_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ES.27789.6	chr5	+	4613	5	NIC	ENSMUSG00000016503.19	novel	1678	7	NA	NA	16	-1	intron_retention	FALSE	canonical	3	437	junction_4	55.2873177139206	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	False	NA	14	True	ATTAAA	-14	NA	146885482	146892415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657
ES.27789.9	chr5	+	1307	10	NNC	ENSMUSG00000016503.19	novel	1298	9	NA	NA	20	44512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	161.243776796364	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAACTCATTTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	146885486	146936936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177_146892418_146936900
ES.2779.1	chr10	+	1300	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-155	1056	40	-3	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGTTGTAAAGGTGT	1366	False	NA	49	True	ATTAAA	-20	NA	53472892	53484265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.10	chr10	+	2431	3	FSM	ENSMUSG00000019857.8	ENSMUST00000218043.2	735	3	-257	-1439	46	-50	multi-exon	FALSE	canonical	3	727	junction_2	53	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTCTTTTATATG	1567	False	NA	2	True	ATTAAA	-12	NA	53473093	53484218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204
ES.2779.11	chr10	+	8311	5	Fusion	ENSMUSG00000019857.8_ENSMUSG00000112332.2	novel	2201	4	NA	NA	117	3	intron_retention	FALSE	canonical	1	1	junction_2	352.67371606061	151	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGCTGTGGTGTGTTA	1638	False	NA	NA	False	AATAAA	-18	NA	53473164	53491373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_53473395_53476490_53476666_53478443_53478560_53482204_53482382_53483760
ES.2779.12	chr10	+	6537	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	118	-4454	118	4454	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATTTTAGTGTATTCA	1639	False	NA	NA	False	AATAAA	-15	NA	53473165	53489775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.13	chr10	+	2058	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	121	22	121	-22	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACGATTTGAAAAAAAAAA	1642	False	NA	NA	False	AATAAA	-13	NA	53473168	53485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.14	chr10	+	1323	1	Genic_Genomic	ENSMUSG00000019857.8	novel	NA	NA	NA	NA	5659	104	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTCACTGGAGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	53484102	53485425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_53484100_53485400
ES.2779.15	chr10	+	1605	1	FSM	ENSMUSG00000112332.2	ENSMUST00000219458.2	906	1	-803	104	-803	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTTTATTTTTTTTG	1387	False	NA	NA	False	AATAAA	-22	NA	53489661	53491266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53489700_53491300
ES.2779.2	chr10	+	1190	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-154	1165	41	78	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAATGTGTTAT	1367	False	NA	7	True	TATAAA	-20	NA	53472893	53484156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.3	chr10	+	5052	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-119	-2732	76	2732	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGGCTTAGTGGAAT	1402	False	NA	NA	False	AATAAA	-23	NA	53472928	53488053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.4	chr10	+	2793	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-66	-526	-66	526	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCCTCTTTTTG	1455	False	NA	NA	False	NA	NA	NA	53472981	53485847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.5	chr10	+	4518	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	-33	-2284	-33	2284	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATCTATGAATAACATACA	1488	False	NA	NA	False	AATAAA	-25	NA	53473014	53487605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.6	chr10	+	876	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	27	1298	27	15	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGAAGTTCCGTAAGTA	1548	False	NA	NA	False	ATTAAA	-13	NA	53473074	53484023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.7	chr10	+	4783	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	27	-2609	27	2609	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATAAGGCTTTATTCTA	1548	False	NA	NA	False	ATTAAA	-15	NA	53473074	53487930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ES.2779.8	chr10	+	1409	1	FSM	ENSMUSG00000019857.8	ENSMUST00000219533.2	955	1	-454	0	46	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAAGTCACAGCCCC	1567	False	NA	NA	False	AATAAA	-15	NA	53473093	53474502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_53473100_53474500
ES.2779.9	chr10	+	11856	3	Fusion	ENSMUSG00000019857.8_ENSMUSG00000112332.2	novel	2201	4	NA	NA	46	7	intron_retention	FALSE	canonical	3	699	junction_2	67	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGGTGTGTTATCTT	1567	False	NA	NA	False	AATAAA	-22	NA	53473093	53491377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_53473395_53478443_53482382_53483760
ES.27790.1	chr5	-	4941	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	11	-3818	-1	24	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACTTGGTCTCCATGAA	NA	False	NA	NA	False	AATAAA	-41	NA	146900596	146888358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ES.27790.10	chr5	-	1846	5	NNC	ENSMUSG00000016510.12	novel	1257	5	NA	NA	-1	-414	intron_retention	FALSE	canonical	1	1	junction_1	46.7138897973611	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGTTGTGTAGTGAAT	NA	False	NA	-23	True	AATAAA	-12	NA	146900596	146891743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146892626_146893477_146893755_146895634_146896087_146900030_146900191_146900521
ES.27790.11	chr5	-	1716	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	0	415	0	-415	multi-exon	FALSE	canonical	3	7	junction_4	53.5863788662753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGTTGTGTAGTGAA	NA	False	NA	-24	True	AATAAA	-11	NA	146900597	146891744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
ES.27790.2	chr5	-	1968	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	11	-845	-1	-2	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGTGCATTTGTGC	NA	False	NA	0	True	NA	NA	NA	146900596	146891331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ES.27790.3	chr5	-	2007	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-35	2955	-20	-8	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTAGAGGCTGTGCAT	NA	False	NA	-6	True	NA	NA	NA	146900630	146891337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ES.27790.4	chr5	-	2123	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	0	8	0	-8	multi-exon	FALSE	canonical	3	7	junction_4	53.5863788662753	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTAGAGGCTGTGCAT	NA	False	NA	-6	True	NA	NA	NA	146900597	146891337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
ES.27790.5	chr5	-	1530	4	NIC	ENSMUSG00000016510.12	novel	1134	4	NA	NA	-1	-397	intron_retention	FALSE	canonical	1	3	junction_3	56.7156650905785	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGACCTTCACCTGACT	NA	False	NA	-6	True	AATAAA	-29	NA	146900596	146891726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146892626_146893596_146893755_146895634_146896087_146900575
ES.27790.6	chr5	-	1595	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	-16	3348	-1	-401	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTGACCTTCACCT	NA	False	NA	-10	True	AATAAA	-25	NA	146900611	146891730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ES.27790.7	chr5	-	1741	5	FSM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	-38	-446	0	-401	multi-exon	FALSE	canonical	3	9	junction_4	53.0023584380922	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTGACCTTCACCT	NA	False	NA	-10	True	AATAAA	-25	NA	146900597	146891730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900521
ES.27790.8	chr5	-	1565	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	7	-438	-3	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900600	146891738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ES.27790.9	chr5	-	1530	4	NNC	ENSMUSG00000016510.12	novel	4927	4	NA	NA	-2201	-411	intron_retention	FALSE	canonical	0	0	junction_3	58.1262992686328	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTGTAGTGAATCTG	NA	False	NA	-20	True	AATAAA	-15	NA	146902811	146891740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146892626_146893596_146893755_146895634_146896087_146902776
ES.27791.1	chr5	-	194	1	Intergenic	novelGene_23112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTAAATCCATGATA	NA	False	NA	NA	False	NA	NA	NA	146927256	146927062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_146927100_146927300
ES.27792.1	chr5	+	3012	2	Antisense	novelGene_ENSMUSG00000016520.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5567	False	NA	NA	False	NA	NA	NA	146954364	146958326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_146955865_146956814
ES.27793.1	chr5	+	137	1	Intergenic	novelGene_23113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147005112	147005249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147005100_147005200
ES.27794.1	chr5	+	595	1	Intergenic	novelGene_23114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147005578	147006173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147005600_147006200
ES.27795.1	chr5	+	1378	4	NNC	ENSMUSG00000029642.12	novel	1137	3	NA	NA	-376	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	201.277586101053	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147013483	147048171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147013712_147014142_147014504_147038038_147038114_147047457
ES.27795.3	chr5	+	1121	3	NNC	ENSMUSG00000029642.12	novel	1196	2	NA	NA	-357	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	224.5	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGAGTGGTTTCTCTT	NA	False	NA	21	True	NA	NA	NA	147013502	147015895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147013712_147014142_147014504_147015344
ES.27795.5	chr5	+	4520	3	NNC	ENSMUSG00000029642.12	novel	1350	4	NA	NA	11	-4379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	200	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAACTTGCGTACATT	NA	False	NA	NA	False	TTTAAA	-3	NA	147014384	147043301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147014504_147038038_147038156_147039017
ES.27795.7	chr5	+	2083	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	243	-1189	25	953	multi-exon	FALSE	canonical	3	400	junction_1	26.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACCAAGTATGCTCAT	NA	False	NA	NA	False	CATAAA	-44	NA	147014398	147049360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147014504_147038038_147038114_147047457
ES.27795.8	chr5	+	2426	1	Intergenic	novelGene_23115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147026880	147029306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147026900_147029300
ES.27795.9	chr5	+	2400	2	FSM	ENSMUSG00000029642.12	ENSMUST00000201007.2	363	2	-1550	-487	-1550	-4	multi-exon	FALSE	canonical	3	453	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTTTCCTCTTTTGG	NA	False	NA	12	True	AATAAA	-13	NA	147036423	147048167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147038114_147047457
ES.27796.1	chr5	-	5350	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	34	-827	34	827	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCACATGAAGGCTCACA	4994	False	NA	NA	False	NA	NA	NA	147013362	146952637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.10	chr5	-	4855	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	0	-446	intron_retention	FALSE	canonical	0	0	junction_8	20.81903212845	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGCCTTCAGCTTA	4960	False	NA	-10	True	NA	NA	NA	147013396	146953910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978096_146979309_147013227
ES.27796.11	chr5	-	3483	9	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	2	-623	intron_retention	FALSE	canonical	1	1	junction_8	20.1788874817221	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGTGAATATTTGGGG	4962	False	NA	1	True	CATAAA	-18	NA	147013394	146954087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_147013208
ES.27796.12	chr5	-	3942	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	-9	624	-9	-624	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGTGAATATTTGGG	4951	False	NA	0	True	CATAAA	-17	NA	147013405	146954088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.13	chr5	-	4073	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	-325	-626	intron_retention	FALSE	canonical	0	0	junction_9	20.3803342634844	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCTGGTGAATATTTG	4635	False	NA	-2	True	CATAAA	-15	NA	147013721	146954090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013410
ES.27796.14	chr5	-	3822	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	127	-627	intron_retention	FALSE	canonical	3	4	junction_9	19.312888295669	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTCTGGTGAATATTT	5087	False	NA	-3	True	CATAAA	-14	NA	147013269	146954091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013208
ES.27796.15	chr5	-	3384	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	3	1170	3	439	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTGCCTGGTTAATAT	4963	False	NA	NA	False	AGTAAA	-12	NA	147013393	146954634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.16	chr5	-	3067	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	0	1490	0	119	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCGCATACACACA	4960	False	NA	NA	False	ATTAAA	-18	NA	147013396	146954954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.17	chr5	-	3059	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	24	116	intron_retention	FALSE	canonical	3	4	junction_9	19.312888295669	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAGTGCGCATACAC	4984	False	NA	NA	False	ATTAAA	-15	NA	147013372	146954957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013208
ES.27796.18	chr5	-	2890	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	56	49	intron_retention	FALSE	canonical	0	0	junction_2	21.4637219052216	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGTCTGGAGAAGTTT	5016	False	NA	NA	False	NA	NA	NA	147013340	146955024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961212_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.2	chr5	-	4577	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	-20	0	-20	0	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCCTCATGTTTCCTCG	4940	False	NA	NA	False	NA	NA	NA	147013416	146953464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.3	chr5	-	4472	11	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	0	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	20.4843842963366	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGAGCCCGCCTCATGTT	4960	False	NA	NA	False	NA	NA	NA	147013396	146953470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955382_146955460_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.4	chr5	-	4558	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	11	-7	intron_retention	FALSE	canonical	3	4	junction_9	19.312888295669	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGAGCCCGCCTCATGT	4971	False	NA	NA	False	NA	NA	NA	147013385	146953471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013208
ES.27796.5	chr5	-	4057	9	NIC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	23	-9	intron_retention	FALSE	canonical	1	1	junction_8	20.1788874817221	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGGAGCCCGCCTCAT	4983	False	NA	NA	False	NA	NA	NA	147013373	146953473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_147013227
ES.27796.6	chr5	-	4141	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	-21	437	-21	-437	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTTACATTCTTCC	4939	False	NA	-1	True	NA	NA	NA	147013417	146953901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ES.27796.7	chr5	-	3649	9	NIC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	0	-440	intron_retention	FALSE	canonical	1	1	junction_8	20.1788874817221	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTTCAGCTTACATTCT	4960	False	NA	-4	True	NA	NA	NA	147013396	146953904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_147013227
ES.27796.8	chr5	-	4169	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	-34	-441	intron_retention	FALSE	canonical	3	4	junction_9	19.312888295669	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTTCAGCTTACATTC	4926	False	NA	-5	True	NA	NA	NA	147013430	146953905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013208
ES.27796.9	chr5	-	4128	10	NNC	ENSMUSG00000016520.8	novel	4557	10	NA	NA	-841	-444	intron_retention	FALSE	canonical	0	0	junction_7	22.647050335284	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTTCAGCTTACA	4119	False	NA	-8	True	NA	NA	NA	147014237	146953908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969808_146970088_146970331_146978840_146979309_147013976
ES.27797.1	chr5	+	180	1	Intergenic	novelGene_23116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAATAGAAGATTAG	9361	False	NA	NA	False	NA	NA	NA	147086926	147087106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147086900_147087100
ES.27798.1	chr5	+	1748	2	FSM	ENSMUSG00000053129.6	ENSMUST00000065382.6	1773	2	27	-2	27	2	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCCTCTGGGGTCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	147125532	147127759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147126109_147126587
ES.27799.1	chr5	+	165	1	Intergenic	novelGene_23117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTAAAAAAAAAAAAAGAGC	7842	False	NA	NA	False	NA	NA	NA	147196523	147196688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147196500_147196700
ES.278.1	chr1	+	1763	1	ISM	ENSMUSG00000037408.11	ENSMUST00000153128.2	4547	7	35380	2	35004	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTGGTGAGCATATAA	NA	False	NA	NA	False	AATAAA	-16	NA	36546080	36547843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_36546100_36547800
ES.2780.1	chr10	-	4795	13	ISM	ENSMUSG00000058298.11	ENSMUST00000237608.2	4882	14	371	-21	-109	21	3prime_fragment	FALSE	canonical	3	17	junction_3	8.05536398239638	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCTTGTGTTTGGAT	NA	False	NA	4	True	ACTAAA	-22	NA	53506164	53412389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.10	chr10	-	4704	13	NIC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-5	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	11.4309521329882	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGGTGGGCAGAG	NA	False	NA	-9	True	AATAAA	-17	NA	53506060	53412439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492212_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.11	chr10	-	4567	13	NIC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-45	-17	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	10.060925515191	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGTCTGGTGGGCAG	NA	False	NA	-11	True	AATAAA	-15	NA	53506100	53412441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423610_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.12	chr10	-	4728	13	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	201	-22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	11.2357934991506	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTTCCCTGTCTGGTG	NA	False	NA	-16	True	AATAAA	-10	NA	53505854	53412446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505519
ES.2780.13	chr10	-	3258	1	Intergenic	novelGene_2121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAATTAATTAAATTA	NA	False	NA	NA	False	NA	NA	NA	53422981	53419723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_53419700_53423000
ES.2780.14	chr10	-	1586	8	NIC	ENSMUSG00000058298.11	novel	2421	8	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	12.5795428358579	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCTTTCTAAAACTGCT	NA	False	NA	NA	False	ATTAAA	-22	NA	53506061	53484931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53485111_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.15	chr10	-	3941	7	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	448	6	-32	-6	3prime_fragment	FALSE	canonical	3	32	junction_3	5.08811250749125	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCATTTATCCTTTCTA	NA	False	NA	NA	False	ATTAAA	-14	NA	53506087	53484939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.16	chr10	-	3362	7	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	432	601	-48	-601	3prime_fragment	FALSE	canonical	3	32	junction_3	5.08811250749125	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGACAATGGGCCAT	NA	False	NA	NA	False	AATAAA	-25	NA	53506103	53485534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.17	chr10	-	742	5	ISM	ENSMUSG00000058298.11	ENSMUST00000219838.3	4132	8	7647	2338	7167	-2338	3prime_fragment	FALSE	canonical	3	32	junction_3	1.78535710713571	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTCTATGTCCTCCG	NA	False	NA	NA	False	ATTAAA	-11	NA	53498888	53487271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851
ES.2780.2	chr10	-	4064	7	FSM	ENSMUSG00000058298.11	ENSMUST00000220007.2	3513	7	-68	-483	-68	0	multi-exon	FALSE	canonical	1	3	junction_6	10.060925515191	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTTCTGTGTGCTT	NA	False	NA	-17	True	AATAAA	-41	NA	53473812	53412410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423610_53423703_53424592_53424796_53439378_53439554_53472900
ES.2780.3	chr10	-	4806	14	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.0995279737895	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTTCTGTGTGCTT	NA	False	NA	-17	True	AATAAA	-41	NA	53506102	53412410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53483102_53483197_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.4	chr10	-	4576	13	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.0839598820398	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGTCTTTCTGTGTG	NA	False	NA	17	True	AATAAA	-43	NA	53506065	53412413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417732_53423610_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.5	chr10	-	4356	13	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	152	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.3538417384699	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGTCTTTCTGTGT	NA	False	NA	16	True	AATAAA	-42	NA	53505903	53412414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424643_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.6	chr10	-	4246	13	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	156	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.7791062111384	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGTCTTTCTGTGT	NA	False	NA	16	True	AATAAA	-42	NA	53505899	53412414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423610_53423703_53424739_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ES.2780.7	chr10	-	3356	7	NNC	ENSMUSG00000058298.11	novel	4882	14	NA	NA	23350	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.40596737301498	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGGCAGAGATGACTAA	NA	False	NA	-1	True	AATAAA	-25	NA	53445907	53412431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53445794
ES.2780.8	chr10	-	3722	8	NNC	ENSMUSG00000058298.11	novel	3513	7	NA	NA	-13	-9	intron_retention	FALSE	non_canonical	0	0	junction_1	10.3844467687921	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGGGCAGAGATGACT	NA	False	NA	-3	True	AATAAA	-23	NA	53473757	53412433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_53413495_53413870_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53472900
ES.2780.9	chr10	-	4119	7	NIC	ENSMUSG00000058298.11	novel	3513	7	NA	NA	-34	-9	intron_retention	FALSE	canonical	1	3	junction_6	8.39973544556944	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGGGCAGAGATGACT	NA	False	NA	-3	True	AATAAA	-23	NA	53473778	53412433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53472900
ES.27800.1	chr5	+	174	1	Intergenic	novelGene_23118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	147226719	147226893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147226700_147226900
ES.27801.1	chr5	+	177	1	Intergenic	novelGene_23119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147233359	147233536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147233400_147233500
ES.27802.1	chr5	-	2037	3	FSM	ENSMUSG00000029646.4	ENSMUST00000031650.4	2261	3	126	98	126	-98	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATTTCAGATCCTGGA	NA	False	NA	NA	False	GATAAA	-9	NA	147243954	147237712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_147238904_147239990_147240137_147243254
ES.27803.1	chr5	-	176	1	Intergenic	novelGene_23120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGCACTGCCACC	NA	False	NA	NA	False	NA	NA	NA	147270918	147270742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147270700_147270900
ES.27804.1	chr5	+	284	1	Intergenic	novelGene_23121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATGAAGCATATAGGAG	NA	False	NA	NA	False	NA	NA	NA	147334090	147334374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147334100_147334400
ES.27804.2	chr5	+	168	1	Intergenic	novelGene_23122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	147334092	147334260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147334100_147334300
ES.27805.1	chr5	-	215	1	Intergenic	novelGene_23123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147344784	147344569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147344600_147344800
ES.27806.1	chr5	+	701	1	FSM	ENSMUSG00000057157.4	ENSMUST00000078052.4	378	1	-55	-268	-55	268	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTGTGGTCAAAGTTA	2579	False	NA	NA	False	AATAAA	-43	NA	147345736	147346437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147345700_147346400
ES.27806.2	chr5	+	2507	1	FSM	ENSMUSG00000107037.2	ENSMUST00000202874.2	460	1	-987	-1060	-987	1060	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGGCCTCATGGTTC	2585	False	NA	NA	False	ATTAAA	-18	NA	147345742	147348249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147345700_147348200
ES.27807.1	chr5	+	1834	7	NNC	ENSMUSG00000106820.2	novel	1081	3	NA	NA	1	-272	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	34.7295103462299	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGTGATGATTTGAATA	NA	False	NA	2	True	NA	NA	NA	147355411	147359582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147355512_147357439_147357607_147357723_147357825_147357883_147358004_147358061_147358463_147358579_147358584_147358641
ES.27807.10	chr5	+	5373	22	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.2343711648026	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366968	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147437643_147437783_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147481370_147481443_147482415_147482546_147483174
ES.27807.11	chr5	+	5048	19	FSM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	15.1677858764904	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366970	147485312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.12	chr5	+	5676	18	ISM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	0	1	0	-1	intron_retention	FALSE	canonical	3	100	junction_5	15.3065560280373	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTTTTTATTAC	NA	False	NA	NA	False	AATAAA	-22	NA	147366970	147485311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.13	chr5	+	4965	20	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	32.6112840114483	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTGTATTTCTGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	147366970	147485301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367621_147367692_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.14	chr5	+	5388	22	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_17	57.9404260471179	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366975	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.15	chr5	+	4077	19	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	7	-920	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	41.7916643587755	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCTGGAGATTTTTTTC	NA	False	NA	NA	False	AAAAAG	-45	NA	147366977	147484378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.16	chr5	+	5080	19	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.0242225277532	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTCTGTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	147366979	147485308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.17	chr5	+	2255	13	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	10	-476	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	36.1028623057323	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATAATCCTTTGGCA	NA	False	NA	NA	False	AGTAAA	-42	NA	147366980	147468079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463331_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026
ES.27807.18	chr5	+	5823	19	FSM	ENSMUSG00000029647.16	ENSMUST00000176600.8	5541	19	-282	0	10	0	multi-exon	FALSE	canonical	3	7	junction_4	42.4659631315641	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366980	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.2	chr5	+	1081	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	2	-2	2	2	multi-exon	FALSE	canonical	3	33	junction_2	30.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	147355412	147359856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147355512_147357439_147357607_147359041
ES.27807.20	chr5	+	4954	19	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	32.8654665095277	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366983	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456488_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.22	chr5	+	5245	22	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.0966479829101	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366986	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147429926_147430010_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.23	chr5	+	5013	19	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	34.0678335670265	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366986	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463944_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.24	chr5	+	5273	22	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	59.8614045533684	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366986	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479886_147480019_147482415_147482546_147483174
ES.27807.25	chr5	+	5773	19	NIC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	16	0	intron_retention	FALSE	canonical	3	14	junction_6	40.1597120151004	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366986	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.26	chr5	+	5848	20	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	16	1	intron_retention	FALSE	non_canonical	0	0	junction_5	49.3518095720232	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366986	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429299_147429382_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.27	chr5	+	5990	21	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_6	53.6897569374271	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366986	147485312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147437643_147437783_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.28	chr5	+	5314	22	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	60.9454237100852	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366986	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147429309_147429382_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463331_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473271_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.29	chr5	+	5719	19	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	16	1	intron_retention	FALSE	canonical	1	6	junction_15	42.6616388820069	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366986	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.3	chr5	+	808	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	2	271	2	-271	multi-exon	FALSE	canonical	3	33	junction_2	30.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGATGATTTGAATAT	NA	False	NA	3	True	NA	NA	NA	147355412	147359583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147355512_147357439_147357607_147359041
ES.27807.30	chr5	+	5438	23	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	56.0841310181955	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366986	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147429926_147430010_147437643_147437783_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.31	chr5	+	5926	20	NIC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	18	1	intron_retention	FALSE	canonical	3	7	junction_4	52.4357937421945	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366988	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.33	chr5	+	5717	19	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	19	1	intron_retention	FALSE	canonical	0	0	junction_6	43.4766859618143	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147366989	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.34	chr5	+	4623	17	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	35.4045812713553	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTCTGTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	147366990	147485303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.36	chr5	+	5086	20	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_15	41.5249482797979	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366997	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.38	chr5	+	7725	18	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	34	1	intron_retention	FALSE	canonical	3	100	junction_5	15.4155810272693	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147367004	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.39	chr5	+	8449	18	NIC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	35	1	intron_retention	FALSE	canonical	3	14	junction_6	41.1664693736546	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147367005	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.4	chr5	+	2183	4	NNC	ENSMUSG00000106820.2	novel	1081	3	NA	NA	2	76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.9386982604994	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTAGACGCTTACAC	NA	False	NA	NA	False	NA	NA	NA	147355412	147359930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147355512_147357439_147357607_147357723_147358086_147358375
ES.27807.40	chr5	+	5554	18	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	35	1	intron_retention	FALSE	canonical	1	6	junction_6	33.7869367274633	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147367005	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456488_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.41	chr5	+	7335	16	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_4	36.3275224711084	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367005	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.42	chr5	+	5822	20	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	38	0	intron_retention	FALSE	canonical	1	6	junction_16	52.5960933004621	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367008	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.43	chr5	+	5641	19	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	40	0	intron_retention	FALSE	canonical	1	2	junction_13	50.1540835701883	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367010	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473271_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.45	chr5	+	5163	20	NIC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	41.3345917659083	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367011	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.48	chr5	+	6067	22	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	50	0	intron_retention	FALSE	canonical	0	0	junction_8	60.8345960170885	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367020	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147429309_147429382_147439894_147440013_147441697_147441792_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.49	chr5	+	4074	20	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	-93	-925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.2193912645645	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCGGGCTGGAGATTT	NA	False	NA	NA	False	AAAAAG	-40	NA	147367169	147484373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390059_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.5	chr5	+	1953	3	NNC	ENSMUSG00000106820.2	novel	1081	3	NA	NA	2	-271	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	47	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGATGATTTGAATAT	NA	False	NA	3	True	NA	NA	NA	147355412	147359583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147355512_147357439_147358086_147358375
ES.27807.51	chr5	+	5497	19	NNC	ENSMUSG00000029647.16	novel	5541	19	NA	NA	-46	0	intron_retention	FALSE	canonical	1	1	junction_17	44.0082764382079	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367216	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147481370_147481443_147482415
ES.27807.52	chr5	+	4846	20	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.4475560409597	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAACTTGTATTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	147367258	147485297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391697_147391799_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.54	chr5	+	4014	22	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	77	-924	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.3492111621279	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCGGGCTGGAGATTTT	NA	False	NA	NA	False	AAAAAG	-41	NA	147367339	147484374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147429926_147430010_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.55	chr5	+	5518	22	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	79	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.1277757876141	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147367341	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147429309_147429382_147437643_147437783_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147482649
ES.27807.56	chr5	+	4239	19	NNC	ENSMUSG00000029647.16	novel	4152	18	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.4435215819517	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367981	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147368028_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.57	chr5	+	4412	19	NNC	ENSMUSG00000029647.16	novel	4152	18	NA	NA	518	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6538754578627	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147368223	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147368443_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.58	chr5	+	4672	18	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	33.9402079584521	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAACTTGTATTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	147387499	147485297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147482649
ES.27807.59	chr5	+	4386	14	NIC	ENSMUSG00000029647.16	novel	4152	18	NA	NA	1828	0	intron_retention	FALSE	canonical	0	0	junction_2	38.0088747033245	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147391926	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147391999_147424920_147425069_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.6	chr5	+	5087	19	Fusion	ENSMUSG00000106820.2_ENSMUSG00000029647.16	novel	2544	19	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	34.5012077083301	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147355413	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_+_147355512_147357439_147357607_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.60	chr5	+	8513	1	Intergenic	novelGene_23125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTAAATTGCTGTAG	NA	False	NA	NA	False	NA	NA	NA	147392927	147401440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147392900_147401400
ES.27807.61	chr5	+	4564	14	ISM	ENSMUSG00000029647.16	ENSMUST00000176753.8	2264	17	37449	-2551	-29393	0	3prime_fragment	FALSE	canonical	3	100	junction_1	13.5222805401277	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	6266	False	NA	NA	False	AATAAA	-17	NA	147424918	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.62	chr5	+	5530	15	NNC	ENSMUSG00000029647.16	novel	3486	13	NA	NA	-25928	0	intron_retention	FALSE	canonical	1	1	junction_1	46.7086060330537	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	9731	False	NA	NA	False	AATAAA	-17	NA	147428383	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147429382_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.63	chr5	+	4320	1	Intergenic	novelGene_23126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAACAAAGAAACAAT	204	False	NA	NA	False	NA	NA	NA	147431799	147436119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147431800_147436100
ES.27807.64	chr5	+	5321	15	ISM	ENSMUSG00000029647.16	ENSMUST00000176596.8	4152	18	48383	-5	-15830	-1	3prime_fragment	FALSE	canonical	3	14	junction_1	33.1548623577174	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTTTTTATTAC	6466	False	NA	NA	False	AATAAA	-22	NA	147438481	147485311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.65	chr5	+	4521	1	Intergenic	novelGene_23127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGGAAGAAG	738	False	NA	NA	False	NA	NA	NA	147440074	147444595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147440100_147444600
ES.27807.66	chr5	+	7389	1	FSM	ENSMUSG00000029647.16	ENSMUST00000201248.2	3749	1	-1496	-2144	-1496	2144	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGATAAAGCTGGGTCCT	NA	False	NA	NA	False	AAGAAA	-5	NA	147452815	147460204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147452800_147460200
ES.27807.67	chr5	+	3264	10	NNC	ENSMUSG00000029647.16	novel	3486	13	NA	NA	934	-1	intron_retention	FALSE	canonical	1	6	junction_5	56.0713830755047	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTTGTATTTCTGTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	147463836	147485302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147474013_147474085_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27807.68	chr5	+	3626	7	ISM	ENSMUSG00000029647.16	ENSMUST00000176505.8	3207	8	221	-11	16	-3	intron_retention	FALSE	canonical	3	126	junction_5	9.68532681717842	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTCTGTTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	147466763	147485309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ES.27807.69	chr5	+	242	1	Intergenic	novelGene_23128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTTGTAAGCAGTGCT	3375	False	NA	NA	False	NA	NA	NA	147471841	147472083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147471800_147472100
ES.27807.7	chr5	+	1832	4	NNC	ENSMUSG00000106820.2	novel	1081	3	NA	NA	5	-272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.9386982604994	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGTGATGATTTGAATA	NA	False	NA	2	True	NA	NA	NA	147355415	147359582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147355512_147357439_147357607_147357723_147358086_147358375
ES.27807.70	chr5	+	8951	1	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	269	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	7889	False	NA	NA	False	AATAAA	-17	NA	147476355	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147476400_147485300
ES.27807.71	chr5	+	4083	2	ISM	ENSMUSG00000029647.16	ENSMUST00000176505.8	3207	8	14045	-1	4501	1	3prime_fragment	FALSE	canonical	3	121	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTGTATTTCTGT	NA	False	NA	NA	False	AATAAA	-10	NA	147480587	147485299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_147482546_147483174
ES.27807.8	chr5	+	1870	2	Genic_Genomic	ENSMUSG00000106891.2_ENSMUSG00000107336.2	novel	1057	1	NA	NA	26	-42	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGAGGGGTGGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	147364573	147366654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_147365156_147365366
ES.27807.9	chr5	+	5173	20	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.0901366224708	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147366957	147485306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ES.27808.1	chr5	-	6321	3	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGAAAGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	147375501	147368796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147369852_147369889_147370220_147370565
ES.27809.1	chr5	-	215	1	Intergenic	novelGene_23124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	147388230	147388015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147388000_147388200
ES.2781.1	chr10	-	4275	18	FSM	ENSMUSG00000019856.15	ENSMUST00000020003.15	4164	18	-106	-5	-106	5	multi-exon	FALSE	canonical	1	1	junction_7	2.21976026636626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCCAAGTATATGAATT	4364	False	NA	NA	False	AATAAA	-20	NA	53627325	53509235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53509812_53511327_53511531_53514272_53514378_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
ES.2781.2	chr10	-	4208	17	NIC	ENSMUSG00000019856.15	novel	4164	18	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	2.2220486043289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTACTTCCAAGTATAT	4321	False	NA	NA	False	AATAAA	-15	NA	53627368	53509240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53509812_53511327_53511531_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
ES.2781.3	chr10	-	3524	11	NIC	ENSMUSG00000019856.15	novel	4164	18	NA	NA	1189	0	intron_retention	FALSE	canonical	1	1	junction_6	1.96214168703486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTTCGTGGTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	53553961	53509464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_53511531_53514272_53514378_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826
ES.2781.4	chr10	-	4068	18	FSM	ENSMUSG00000019856.15	ENSMUST00000020003.15	4164	18	-130	226	-130	-1	multi-exon	FALSE	canonical	1	1	junction_7	2.21976026636626	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATGTTTTTCGTGGTTG	4340	False	NA	NA	False	AATAAA	-11	NA	53627349	53509466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53509812_53511327_53511531_53514272_53514378_53517040_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
ES.2781.5	chr10	-	1571	8	ISM	ENSMUSG00000019856.15	ENSMUST00000168949.2	1664	11	3798	2411	-26	-2411	internal_fragment	FALSE	canonical	1	1	junction_4	1.82946406783796	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTTCCCCCCTTTTTT	NA	False	NA	NA	False	AAGAAA	-45	NA	53551352	53516686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231
ES.2781.6	chr10	-	3644	15	ISM	ENSMUSG00000019856.15	ENSMUST00000020003.15	4164	18	-150	7591	-150	-2556	5prime_fragment	FALSE	canonical	1	1	junction_4	2.25989885993662	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACTAAAATGTTAATAAT	4320	False	NA	NA	False	AATAAA	-12	NA	53627369	53516831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_53517159_53523078_53523226_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
ES.2781.7	chr10	-	2150	1	Intergenic	novelGene_2122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAGGAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	53619422	53617272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_53617300_53619400
ES.27810.1	chr5	-	2410	1	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCATACAAAAAGTACAGAC	9437	False	NA	NA	False	NA	NA	NA	147390951	147388541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147388500_147391000
ES.27811.1	chr5	-	166	1	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGTGAGCAGGAA	NA	False	NA	NA	False	NA	NA	NA	147454361	147454195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147454200_147454400
ES.27812.1	chr5	-	4372	3	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCTTTAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	147466256	147461548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147463490_147463733_147463849_147463940
ES.27812.2	chr5	-	4676	1	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147466256	147461580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147461600_147466300
ES.27813.1	chr5	-	2615	1	Intergenic	novelGene_23129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAAATATTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	147493656	147491041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147491000_147493700
ES.27814.1	chr5	-	624	1	Intergenic	novelGene_23130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATAAATATGACCTGA	NA	False	NA	NA	False	NA	NA	NA	147505233	147504609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147504600_147505200
ES.27815.1	chr5	+	306	2	Antisense	novelGene_ENSMUSG00000029648.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	147576652	147577075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_147576884_147577000
ES.27816.1	chr5	-	1691	11	NNC	ENSMUSG00000029648.14	novel	6895	30	NA	NA	241	-2936	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.640312423743285	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAATGTCTGACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	147662557	147594014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_147594254_147609373_147609534_147610342_147610513_147613130_147613249_147614953_147615129_147618423_147618561_147618654_147618818_147620626_147620752_147636591_147636822_147637130_147637228_147662480
ES.27817.1	chr5	-	172	1	Intergenic	novelGene_23131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	147688061	147687889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147687900_147688100
ES.27818.1	chr5	-	159	1	Intergenic	novelGene_23132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	147700948	147700789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147700800_147700900
ES.27819.1	chr5	+	215	1	Intergenic	novelGene_23133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACACAGTTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	147703644	147703859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147703600_147703900
ES.2782.1	chr10	-	1915	1	Intergenic	novelGene_2123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTAATAAAAAATGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	53771672	53769757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_53769800_53771700
ES.27820.1	chr5	-	2678	1	Antisense	novelGene_ENSMUSG00000107065.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	147761010	147758332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147758300_147761000
ES.27821.1	chr5	+	356	1	Intergenic	novelGene_23134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCCATGCCCACAGTG	NA	False	NA	NA	False	NA	NA	NA	147794893	147795249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147794900_147795200
ES.27822.1	chr5	+	783	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	124	672	-43	173	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGGTTGGGTTTGG	NA	False	NA	36	True	AATAAA	-26	NA	147797394	147812594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ES.27822.2	chr5	+	1417	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	160	2	-7	-2	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACTGTTTGTGGACTC	NA	False	NA	NA	False	AATAAA	-24	NA	147797430	147813264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ES.27822.3	chr5	+	3783	5	NIC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	4	168	intron_retention	FALSE	canonical	3	2983	junction_1	200.303987728652	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCATGTGTGTGGTTGGG	NA	False	NA	31	True	AATAAA	-21	NA	147797441	147812589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147809470_147812273
ES.27822.4	chr5	+	653	5	NIC	ENSMUSG00000029649.11	novel	1579	6	NA	NA	-5	167	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	1354.89077050514	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCATGTGTGTGGTTGG	NA	False	NA	30	True	AATAAA	-20	NA	147797457	147812588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147797502_147799362_147799461_147806221_147806324_147809375_147809470_147812273
ES.27822.5	chr5	+	1296	5	FSM	ENSMUSG00000029649.11	ENSMUST00000201376.4	383	5	20	-933	-5	-2	multi-exon	FALSE	canonical	3	16	junction_4	1373.19026358331	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACTGTTTGTGGACTC	NA	False	NA	NA	False	AATAAA	-24	NA	147797457	147813264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147812273
ES.27823.1	chr5	-	2898	6	FSM	ENSMUSG00000029650.11	ENSMUST00000031655.4	2434	6	-20	-444	-20	440	multi-exon	FALSE	canonical	1	3	junction_4	0.8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTCCCTCCTCTCGTG	NA	False	NA	NA	False	NA	NA	NA	147831645	147814806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831290
ES.27823.2	chr5	-	2225	6	FSM	ENSMUSG00000029650.11	ENSMUST00000031655.4	2434	6	209	0	209	0	multi-exon	FALSE	canonical	1	3	junction_4	0.8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTGGTTTTCATTT	NA	False	NA	NA	False	AATGAA	-26	NA	147831416	147815250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831290
ES.27824.1	chr5	-	188	1	Intergenic	novelGene_23135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	147841488	147841300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147841300_147841500
ES.27825.1	chr5	+	180	1	Intergenic	novelGene_23136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	5261	False	NA	NA	False	NA	NA	NA	147878536	147878716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147878500_147878700
ES.27826.1	chr5	-	689	2	NNC	ENSMUSG00000085565.2	novel	3308	4	NA	NA	5349	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTGTTGTGTGTGTG	6218	False	NA	NA	False	AATAAA	-10	NA	147888627	147886674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_147887279_147888542
ES.27827.1	chr5	+	4461	17	NNC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.8671026004456	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	147894103	148250270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147894532_147906753_147906847_148012989_148014203_148014484_148015369_148019766_148020008_148043814_148044010_148140731_148140894_148168546_148168646_148173075_148173288_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.10	chr5	+	3816	10	NNC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	-689	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	43.0497845594758	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGATATCCATGTGGT	NA	False	NA	3	True	ATTAAA	-16	NA	148172112	148252865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_148172188_148173075_148173288_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.11	chr5	+	3719	9	FSM	ENSMUSG00000029651.17	ENSMUST00000110515.9	1792	9	57	-1984	-14	-10	multi-exon	FALSE	canonical	0	0	junction_1	45.1274237576221	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGATATCCATGTGGT	NA	False	NA	3	True	ATTAAA	-16	NA	148202083	148252865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148202274_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.12	chr5	+	3178	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	5	-2598	-4	-7	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATATCCATGTGGTCTG	NA	False	NA	6	True	ATTAAA	-19	NA	148239979	148252868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ES.27827.13	chr5	+	2471	1	NIC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	1	-7815	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	148239984	148242455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_148240000_148242500
ES.27827.14	chr5	+	1036	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	6	-33	6	-5	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGTTTCCTGGAAATAT	NA	False	NA	NA	False	AATGAA	-12	NA	148239989	148250843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ES.27827.15	chr5	+	3281	3	ISM	ENSMUSG00000029651.17	ENSMUST00000110514.8	1532	8	37835	-2027	6	0	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGTCTGTGTTAAC	NA	False	NA	13	True	ATTAAA	-26	NA	148239989	148252875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_148240413_148243439_148243538_148250115
ES.27827.16	chr5	+	984	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	19	-418	10	-122	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCCGCATGTGTATATC	NA	False	NA	NA	False	AATACA	-19	NA	148239993	148250688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ES.27827.17	chr5	+	663	3	ISM	ENSMUSG00000029651.17	ENSMUST00000146425.2	1131	8	37901	92	19	0	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	148240002	148250270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_148240413_148243439_148243538_148250115
ES.27827.18	chr5	+	3049	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	21	-2061	21	-4	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCCATGTGGTCTGTGT	NA	False	NA	9	True	ATTAAA	-22	NA	148240004	148252871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ES.27827.19	chr5	+	1118	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	33	-566	24	-12	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTATCTAGTTTCCTG	NA	False	NA	NA	False	AATGAA	-5	NA	148240007	148250836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ES.27827.2	chr5	+	7220	15	NIC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.6595617729912	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCATGTGGTCTGTGTTA	NA	False	NA	11	True	ATTAAA	-24	NA	147894136	148252873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147894532_148012989_148015369_148019766_148020008_148043814_148044010_148140731_148140894_148168546_148168646_148173075_148173288_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.20	chr5	+	3439	3	NNC	ENSMUSG00000029651.17	novel	1009	4	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_2	57	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCATGTGGTCTGTGTTA	NA	False	NA	11	True	ATTAAA	-24	NA	148240011	148252873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_148240413_148243439_148243720_148250115
ES.27827.21	chr5	+	441	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	28	540	28	0	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCCTCCTCTGGA	NA	False	NA	15	True	ATTAAA	-23	NA	148240011	148250270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ES.27827.22	chr5	+	532	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	52	1	43	-1	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGGCTCCTCCTCTGG	NA	False	NA	14	True	ATTAAA	-22	NA	148240026	148250269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ES.27827.23	chr5	+	3635	2	NIC	ENSMUSG00000029651.17	novel	585	4	NA	NA	69	-5	intron_retention	FALSE	canonical	3	103	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACAGAGGCTCCTCCT	NA	False	NA	10	True	ATTAAA	-18	NA	148240052	148250265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_148243538_148250115
ES.27827.24	chr5	+	1157	3	ISM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	101	-36	101	-2	3prime_fragment	FALSE	canonical	3	103	junction_2	5.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTCCTGGAAATATTTC	NA	False	NA	NA	False	AATGAA	-15	NA	148240084	148250846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_148240413_148243439_148243538_148250115
ES.27827.25	chr5	+	4350	1	NIC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	6538	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAGAGAAGAAAAGAAG	NA	False	NA	NA	False	AATGAA	-40	NA	148246521	148250871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_148246500_148250900
ES.27827.3	chr5	+	4476	15	NIC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	124	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.6595617729912	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGAGGCTCCTCCTCTG	NA	False	NA	13	True	ATTAAA	-21	NA	147894275	148250268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147894532_148012989_148015369_148019766_148020008_148043814_148044010_148140731_148140894_148168546_148168646_148173075_148173288_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.4	chr5	+	4186	7	NIC	ENSMUSG00000029651.17	novel	7543	15	NA	NA	348	-1829	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.06155281280883	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGCATTTCTTCCTTG	NA	False	NA	NA	False	AGTAAA	-22	NA	147894499	148174153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_147894532_148012989_148015369_148019766_148020008_148043814_148044010_148140731_148140894_148168546_148168646_148173075
ES.27827.5	chr5	+	1104	2	Intergenic	novelGene_23137	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTACCAGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	147917816	147919415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147918191_147918685
ES.27827.6	chr5	+	179	2	Intergenic	novelGene_23139	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGGAGTGAACAGGGACT	NA	False	NA	NA	False	NA	NA	NA	147946220	147949988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147946385_147949973
ES.27827.7	chr5	+	177	1	Intergenic	novelGene_23138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	147946220	147946397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_147946200_147946400
ES.27827.8	chr5	+	4333	15	NNC	ENSMUSG00000029651.17	novel	2555	4	NA	NA	-50598	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.6595617729912	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGAGGCTCCTCCTCTGG	9736	False	NA	14	True	ATTAAA	-22	NA	147969099	148250269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_147969212_148012989_148015369_148019766_148020008_148043814_148044010_148140731_148140894_148168546_148168646_148173075_148173288_148214409_148214477_148225683_148225899_148232292_148232399_148235061_148235136_148238207_148238307_148240292_148240413_148243439_148243538_148250115
ES.27827.9	chr5	+	111	1	Intergenic	novelGene_23141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	148048308	148048419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148048300_148048400
ES.27828.1	chr5	-	4651	2	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147922031	147916266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147919521_147920634
ES.27829.1	chr5	-	1105	4	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	9.93310961716756	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGTAGTATACTCTTT	8608	False	NA	-2	True	NA	NA	NA	147949125	147941085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147941718_147943327_147943469_147943860_147944081_147949013
ES.27829.2	chr5	-	1271	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGTAGTATACTCTTT	8595	False	NA	-2	True	NA	NA	NA	147949138	147941085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
ES.2783.1	chr10	+	4566	1	Intergenic	novelGene_2124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTGAAAAATATTTGT	NA	False	NA	NA	False	NA	NA	NA	53916206	53920772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_53916200_53920800
ES.27830.1	chr5	-	163	1	Intergenic	novelGene_23140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	147969092	147968929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_147968900_147969100
ES.27831.1	chr5	-	139	1	Intergenic	novelGene_23142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGAGAGGGGGAGAAA	NA	False	NA	NA	False	NA	NA	NA	148139377	148139238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148139200_148139400
ES.27832.1	chr5	-	3281	1	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTTGGTCTCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	148252086	148248805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_148248800_148252100
ES.27833.1	chr5	+	5399	11	Antisense	novelGene_ENSMUSG00000041313.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGGGGCCTGAGAAA	5987	False	NA	NA	False	AATAAA	-35	NA	148271299	148334762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_148271471_148272188_148272401_148273912_148274023_148277348_148277490_148278746_148278965_148279546_148279667_148282612_148282771_148284965_148285118_148288868_148289262_148301973_148302061_148331125
ES.27833.2	chr5	+	9841	1	Intergenic	novelGene_23143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCATGATGGGCCATC	NA	False	NA	NA	False	NA	NA	NA	148289941	148299782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148289900_148299800
ES.27833.3	chr5	+	1523	1	Intergenic	novelGene_23144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3247	False	NA	NA	False	NA	NA	NA	148306453	148307976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148306500_148308000
ES.27833.4	chr5	+	200	1	Intergenic	novelGene_23145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTGTGCCTAATCCTG	6464	False	NA	NA	False	NA	NA	NA	148309670	148309870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148309700_148309900
ES.27833.5	chr5	+	3451	1	Intergenic	novelGene_23146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAACCAAGAGACTCGA	7389	False	NA	NA	False	NA	NA	NA	148310595	148314046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148310600_148314000
ES.27833.6	chr5	+	4120	1	Intergenic	novelGene_23147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGGGGCCTGAGAAA	NA	False	NA	NA	False	AATAAA	-35	NA	148330642	148334762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148330600_148334800
ES.27834.1	chr5	-	4950	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-27	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	124.85655674939	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTGGTCTCAAGCG	5504	False	NA	-2	True	AATAAA	-21	NA	148336628	148264218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148266916_148269059_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.10	chr5	-	7199	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.485579731561	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	5494	False	NA	-5	True	AATAAA	-18	NA	148336638	148264221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148295886_148295985_148301971_148302062_148336538
ES.27834.11	chr5	-	3550	4	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	8110	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.366122489466	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	NA	False	NA	-5	True	AATAAA	-18	NA	148271429	148264221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148265288_148267106_148269354_148270699_148270809_148271301
ES.27834.12	chr5	-	5201	8	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	766	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.463398372694	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	NA	False	NA	-5	True	AATAAA	-18	NA	148278773	148264221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148268212_148268910_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742
ES.27834.13	chr5	-	7061	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	127.845256940655	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	5462	False	NA	-5	True	AATAAA	-18	NA	148336670	148264221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278894_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.14	chr5	-	7197	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	186.438688622787	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCACTGTGTGGTCTC	5517	False	NA	-7	True	AATAAA	-16	NA	148336615	148264223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282092_148282210_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336534
ES.27834.16	chr5	-	5915	7	NIC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-36	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	155.361585413584	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAACTCACTGTGTGGTCT	5495	False	NA	-8	True	AATAAA	-15	NA	148336637	148264224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148301971_148302062_148336538
ES.27834.17	chr5	-	6902	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	67	210	-46	-210	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTCTATTTTATTTTA	5485	False	NA	NA	False	NA	NA	NA	148336647	148264429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.18	chr5	-	4437	1	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	67707	351	10532	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAATTGTATATATAT	NA	False	NA	NA	False	ATTAAA	-24	NA	148269007	148264570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_148264600_148269000
ES.27834.19	chr5	-	6338	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	-39	880	-39	-880	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCGCCTGGTCTTTCTG	5379	False	NA	22	True	NA	NA	NA	148336753	148265099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.2	chr5	-	7375	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	-196	0	-196	0	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	5222	False	NA	-3	True	AATAAA	-20	NA	148336910	148264219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.20	chr5	-	6145	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-18664	-906	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	162.01263739152	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	NA	False	NA	-4	True	NA	NA	NA	148355378	148265125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148266658_148266687_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148355300
ES.27834.21	chr5	-	6225	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	45	-906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.537960974123	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	5463	False	NA	-4	True	NA	NA	NA	148336669	148265125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272398_148273912_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.22	chr5	-	5839	12	NIC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	50	-906	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	131.290102098715	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	5468	False	NA	-4	True	NA	NA	NA	148336664	148265125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148301971_148302062_148336538
ES.27834.23	chr5	-	6201	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	28	-906	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	126.426087322022	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGCTGGTTTTCACC	5446	False	NA	-4	True	NA	NA	NA	148336686	148265125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148302015_148302062_148336538
ES.27834.25	chr5	-	6219	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	33	-937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	128.58579064405	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAAAAT	5451	False	NA	-35	True	NA	NA	NA	148336681	148265156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288865_148289260_148301971_148302062_148336538
ES.27834.26	chr5	-	6162	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	0	-937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	129.23006508635	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAAAAT	NA	False	NA	-35	True	NA	NA	NA	148308356	148265156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148308260
ES.27834.3	chr5	-	7275	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.485579731561	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	5516	False	NA	-3	True	AATAAA	-20	NA	148336616	148264219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148296710_148296905_148301971_148302062_148336538
ES.27834.30	chr5	-	5852	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	21	1306	21	-1306	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGAATCTTAAGTGGG	5439	False	NA	4	True	AATAAA	-28	NA	148336693	148265525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.31	chr5	-	3964	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	-25	3240	-25	-3240	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCTATTGTCTTCTT	5393	False	NA	-4	True	GATAAA	-25	NA	148336739	148267459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.33	chr5	-	3858	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-45	-3250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.537960974123	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGGTCTTGATTACCTA	5486	False	NA	-14	True	GATAAA	-15	NA	148336646	148267469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272398_148273912_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.34	chr5	-	3553	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	8	3618	8	3492	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCCTGTCTTTCCTC	5426	False	NA	NA	False	NA	NA	NA	148336706	148267837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.35	chr5	-	3446	13	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	13	3447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	129.23006508635	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTGACCCAAGTCTG	5544	False	NA	NA	False	TATAAA	-21	NA	148336588	148267882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336482
ES.27834.36	chr5	-	3043	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	104	4032	-9	3078	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGCTTGCGGTTCAAG	5522	False	NA	NA	False	GGGGCT	-42	NA	148336610	148268251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.37	chr5	-	2894	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	44	4241	44	2869	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTCGGGTCTTCTAAA	5462	False	NA	NA	False	NA	NA	NA	148336670	148268460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.38	chr5	-	2623	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	2	4554	2	2556	multi-exon	FALSE	canonical	3	299	junction_1	51.9975293216472	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCACATCTTACTGCT	5420	False	NA	NA	False	NA	NA	NA	148336712	148268773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.39	chr5	-	2488	12	NIC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	44	2553	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	131.544040954898	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGCCCACATCTTACT	5462	False	NA	NA	False	NA	NA	NA	148336670	148268776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148336538
ES.27834.40	chr5	-	4294	3	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	4871	1665	intron_retention	FALSE	non_canonical	0	0	junction_2	191.5	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTACTAAGCCAGTC	NA	False	NA	NA	False	NA	NA	NA	148274668	148269664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148270809_148271301_148271766_148271982
ES.27834.41	chr5	-	3513	2	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	63044	5445	5869	1665	intron_retention	FALSE	canonical	3	383	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTACTAAGCCAGTC	NA	False	NA	NA	False	NA	NA	NA	148273670	148269664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_148270809_148271301
ES.27834.42	chr5	-	2953	12	ISM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	127	5445	14	1665	5prime_fragment	FALSE	canonical	3	383	junction_1	35.5351066081543	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTACTAAGCCAGTC	5545	False	NA	NA	False	NA	NA	NA	148336587	148269664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.6	chr5	-	6686	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.85655674939	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	5451	False	NA	-3	True	AATAAA	-20	NA	148336681	148264219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148267133_148267592_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27834.8	chr5	-	7193	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.485579731561	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTGTGTGGTCTCAAG	5519	False	NA	-4	True	AATAAA	-19	NA	148336613	148264220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301024_148301141_148301971_148302062_148336538
ES.27834.9	chr5	-	6809	14	NNC	ENSMUSG00000041313.15	novel	7179	13	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.85655674939	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTGTGGTCTCAA	5465	False	NA	-5	True	AATAAA	-18	NA	148336667	148264221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148267709_148268029_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ES.27835.1	chr5	-	173	1	Intergenic	novelGene_23148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAGATAATTA	3669	False	NA	NA	False	NA	NA	NA	148389144	148388971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148389000_148389100
ES.27836.1	chr5	+	301	1	Intergenic	novelGene_23150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGACGACTCAAG	NA	False	NA	NA	False	NA	NA	NA	148481871	148482172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148481900_148482200
ES.27837.1	chr5	-	2724	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	-192	5	-65	-5	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGCATTTTGTTGAT	NA	False	NA	-9	True	AATAAA	-16	NA	148489664	148441449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ES.27837.10	chr5	-	2117	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-55	2	-55	-2	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATATTTTTTTTTCA	NA	False	NA	NA	False	ACTAAA	-39	NA	148489654	148441940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ES.27837.12	chr5	-	1252	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-35	847	-35	2	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGGTCCTTTATTC	NA	False	NA	-3	True	AGTAAA	-17	NA	148489634	148442785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ES.27837.14	chr5	-	4342	1	Intergenic	novelGene_23149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148470703	148466361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148466400_148470700
ES.27837.15	chr5	-	6214	1	FSM	ENSMUSG00000001687.16	ENSMUST00000201597.2	6113	1	-146	45	-55	-45	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGAATTTGACTCATCA	NA	False	NA	NA	False	NA	NA	NA	148489654	148483440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148483400_148489700
ES.27837.2	chr5	-	4274	2	ISM	ENSMUSG00000001687.16	ENSMUST00000201688.4	551	5	28419	-1338	28419	-5	3prime_fragment	FALSE	canonical	3	403	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGCATTTTGTTGAT	NA	False	NA	-9	True	AATAAA	-16	NA	148445981	148441449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_148442998_148443255
ES.27837.3	chr5	-	5230	4	NIC	ENSMUSG00000001687.16	novel	2537	5	NA	NA	-33	-5	intron_retention	FALSE	canonical	3	361	junction_2	39.293765408777	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTGCATTTTGTTGAT	NA	False	NA	-9	True	AATAAA	-16	NA	148489632	148441449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148442998_148443255_148443334_148446078_148448813_148488762
ES.27837.4	chr5	-	2590	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	-39	-487	-39	-7	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTAGTGCATTTTGTTG	NA	False	NA	-11	True	AATAAA	-14	NA	148489638	148441451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ES.27837.5	chr5	-	2640	7	NNC	ENSMUSG00000001687.16	novel	2001	7	NA	NA	-46	-27	intron_retention	FALSE	non_canonical	0	0	junction_4	179.050272270109	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAACAAAA	NA	False	NA	-31	True	AATAGA	-16	NA	148489645	148441471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148480423_148480487_148488762_148488861_148488966
ES.27837.6	chr5	-	2849	4	NIC	ENSMUSG00000001687.16	novel	2537	5	NA	NA	-45	-27	intron_retention	FALSE	canonical	3	361	junction_1	39.4208066888541	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAACAAAA	NA	False	NA	-31	True	AATAGA	-16	NA	148489553	148441471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148443334_148446078_148446166_148448703_148448813_148488762
ES.27837.8	chr5	-	2519	5	NNC	ENSMUSG00000001687.16	novel	2537	5	NA	NA	-8	-27	intron_retention	FALSE	non_canonical	0	0	junction_4	168.823872719471	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAACAAAA	NA	False	NA	-31	True	AATAGA	-16	NA	148489607	148441471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448745_148488820
ES.27837.9	chr5	-	1989	5	Fusion	ENSMUSG00000106899.2_ENSMUSG00000001687.16	novel	2537	5	NA	NA	-42	-27	multi-exon	FALSE	canonical	1	2	junction_4	167.96204928495	367	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAACAAAA	NA	False	NA	-31	True	AATAGA	-16	NA	148490713	148441471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148490524
ES.27838.1	chr5	-	3385	3	Intergenic	novelGene_23151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAATAAAAACAATCAA	NA	False	NA	NA	False	NA	NA	NA	148519307	148512644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148514371_148517491_148518359_148518515
ES.27839.1	chr5	-	163	1	Intergenic	novelGene_23152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATTTGTCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	148577901	148577738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148577700_148577900
ES.2784.1	chr10	-	5130	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	7	0	7	0	multi-exon	TRUE	canonical	3	6	junction_11	2.28977194400568	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTTGTCACTGTG	5490	False	NA	NA	False	AATAAA	-19	NA	53951885	53780880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
ES.2784.2	chr10	-	2893	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	26	2218	26	7	multi-exon	FALSE	canonical	3	6	junction_11	2.28977194400568	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTTTCCTTTTCAAG	5509	False	NA	NA	False	AATAAA	-22	NA	53951866	53783098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
ES.2784.3	chr10	-	224	1	Antisense	novelGene_ENSMUSG00000112824.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGGGGGGGCCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	53940909	53940685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_53940700_53940900
ES.27840.1	chr5	+	547	2	NNC	ENSMUSG00000086494.2	novel	550	2	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTACCCTTTGACC	NA	False	NA	NA	False	TTTAAA	-7	NA	148678618	148679951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_148678795_148679580
ES.27841.1	chr5	-	182	1	Intergenic	novelGene_23153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGAAGCTTG	NA	False	NA	-1	True	NA	NA	NA	148718961	148718779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148718800_148719000
ES.27842.1	chr5	-	791	2	Intergenic	novelGene_23154	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGCTTGTCTGGAAGCA	NA	False	NA	NA	False	AATAAA	-13	NA	148732031	148731119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148731837_148731957
ES.27843.1	chr5	-	177	1	Intergenic	novelGene_23155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTATGGCCTATG	NA	False	NA	NA	False	NA	NA	NA	148777324	148777147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148777100_148777300
ES.27844.1	chr5	-	208	1	Intergenic	novelGene_23156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTCTTAGTAGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	148807941	148807733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_148807700_148807900
ES.27845.1	chr5	+	876	1	Intergenic	novelGene_23157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	148824721	148825597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148824700_148825600
ES.27846.1	chr5	-	6230	11	NIC	ENSMUSG00000041298.16	novel	6157	11	NA	NA	98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	3.74299345444258	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGAGATCTTTTCTGC	2560	False	NA	NA	False	AATAAA	-16	NA	148865340	148808393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865145
ES.27846.2	chr5	-	6085	11	FSM	ENSMUSG00000041298.16	ENSMUST00000047257.15	6157	11	70	2	51	-2	multi-exon	FALSE	canonical	0	0	junction_7	3.86781592116274	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGAGATCTTTTCT	2513	False	NA	NA	False	AATAAA	-14	NA	148865387	148808395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865335
ES.27846.3	chr5	-	3395	11	NIC	ENSMUSG00000041298.16	novel	6157	11	NA	NA	-13	1333	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	4.01123422402632	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTTGTGCTTGGACG	2077	False	NA	NA	False	NA	NA	NA	148865823	148811159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865697
ES.27846.4	chr5	-	1676	11	FSM	ENSMUSG00000041298.16	ENSMUST00000047257.15	6157	11	4	4477	4	-378	multi-exon	FALSE	canonical	0	0	junction_7	3.86781592116274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTAATCAGAGGAATC	2447	False	NA	NA	False	ATTAAA	-14	NA	148865453	148812870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865335
ES.27846.5	chr5	-	3107	9	NIC	ENSMUSG00000041298.16	novel	2210	10	NA	NA	-30	-1561	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	4.17582327212252	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATCTTGGAGAGAGTAT	2395	False	NA	NA	False	NA	NA	NA	148865505	148824096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865145
ES.27846.6	chr5	-	3825	1	NIC	ENSMUSG00000041298.16	novel	767	4	NA	NA	181	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGAGTGGTTTTCCT	2643	False	NA	NA	False	NA	NA	NA	148865257	148861432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148861400_148865300
ES.27847.1	chr5	-	586	2	FSM	ENSMUSG00000108207.3	ENSMUST00000204570.2	690	2	109	-5	85	5	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTGTATCATACGCA	NA	False	NA	0	True	ATTAAA	-18	NA	148896405	148895402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148895541_148895957
ES.27847.2	chr5	-	1106	1	FSM	ENSMUSG00000108207.3	ENSMUST00000204589.2	792	1	-18	-296	6	5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTGTATCATACGCA	NA	False	NA	0	True	ATTAAA	-18	NA	148896508	148895402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148895400_148896500
ES.27848.1	chr5	+	4652	1	Antisense	novelGene_ENSMUSG00000108207.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTATTTTGGTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	148899434	148904086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_148899400_148904100
ES.27849.1	chr5	+	185	1	Intergenic	novelGene_23158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAATCTTTGAGA	NA	False	NA	NA	False	AGTAAA	-5	NA	148922266	148922451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148922300_148922500
ES.2785.1	chr10	+	4452	1	Intergenic	novelGene_2125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	54465095	54469547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_54465100_54469500
ES.27850.1	chr5	+	175	1	Intergenic	novelGene_23159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	148979171	148979346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_148979200_148979300
ES.27851.1	chr5	-	2981	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	3	-146	3	146	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAGTTCTGTTCAGCAT	6767	False	NA	NA	False	AAGAAA	-34	NA	148989847	148983365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.10	chr5	-	2314	5	FSM	ENSMUSG00000066551.13	ENSMUST00000093196.11	1092	5	193	-1415	-123	-528	multi-exon	FALSE	canonical	2	17	junction_4	3596.07178042931	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGTTAAATGACTT	8381	False	NA	-10	True	AATAAA	-21	NA	148988233	148984039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148988088
ES.27851.11	chr5	-	1226	6	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	6	-529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3231.3420988809	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATTAGTTAAATGACT	6770	False	NA	-11	True	AATAAA	-20	NA	148989844	148984040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148984086_148985162_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.13	chr5	-	2640	4	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	-5	-537	intron_retention	FALSE	canonical	3	5649	junction_3	1280.51873169518	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTTAAATATTAGTT	6818	False	NA	-19	True	AATAAA	-12	NA	148989796	148984048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148985724_148986536_148987251_148987397_148987562_148989709
ES.27851.14	chr5	-	2004	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	4	830	4	696	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTGTCCAATACATTT	6768	False	NA	NA	False	GATAAA	-15	NA	148989846	148984341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.15	chr5	-	1568	6	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	-146	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3231.3420988809	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTCATAGGTCTGAA	6145	False	NA	NA	False	AGTAAA	-26	NA	148990469	148985029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709_148990067_148990437
ES.27851.16	chr5	-	1303	5	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3456.5444720848	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGTCCTTTTCATAG	6768	False	NA	NA	False	AGTAAA	-19	NA	148989846	148985036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148985728_148986546_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.18	chr5	-	2516	3	FSM	ENSMUSG00000066551.13	ENSMUST00000133667.2	654	3	-21	-1841	3	1	multi-exon	FALSE	canonical	3	5649	junction_2	1488.5	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTGTCCTTTTCATAG	6767	False	NA	NA	False	AGTAAA	-19	NA	148989847	148985036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148987251_148987397_148987562_148989709
ES.27851.19	chr5	-	2074	4	FSM	ENSMUSG00000066551.13	ENSMUST00000139443.8	923	4	21	-1172	-9	-1	multi-exon	FALSE	canonical	3	5649	junction_3	1332.80464518331	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	6814	False	NA	NA	False	AGTAAA	-17	NA	148989800	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.2	chr5	-	2845	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-5	-2	-5	2	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTCTTTGTAACTTTAG	6759	False	NA	NA	False	TTTAAA	-20	NA	148989855	148983509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.20	chr5	-	2671	2	FSM	ENSMUSG00000066551.13	ENSMUST00000123645.2	461	2	-66	-2144	-7	-1	multi-exon	FALSE	canonical	3	5649	junction_1	0	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	6757	False	NA	NA	False	AGTAAA	-17	NA	148989857	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148987562_148989709
ES.27851.22	chr5	-	2424	4	FSM	ENSMUSG00000066551.13	ENSMUST00000110505.8	1720	4	-705	1	372	-1	multi-exon	FALSE	canonical	3	7993	junction_1	258.478023996023	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	7799	False	NA	NA	False	AGTAAA	-17	NA	148988815	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397
ES.27851.23	chr5	-	1707	4	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	5649	junction_3	1280.51873169518	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	6761	False	NA	NA	False	AGTAAA	-17	NA	148989853	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148985724_148986536_148987251_148987397_148987562_148989709
ES.27851.24	chr5	-	2286	3	NIC	ENSMUSG00000066551.13	novel	923	4	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	5649	junction_2	1324.5	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	6749	False	NA	NA	False	AGTAAA	-17	NA	148989865	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148986712_148987104_148987562_148989709
ES.27851.26	chr5	-	1454	4	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	4	-1	intron_retention	FALSE	canonical	3	5649	junction_3	1183.43013688552	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGTTGTCCTTTTCAT	6768	False	NA	NA	False	AGTAAA	-17	NA	148989846	148985038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148985724_148986536_148986712_148987104_148987562_148989709
ES.27851.28	chr5	-	1298	5	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3328.48141049338	1842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTGTTGTCCTTTTCA	6768	False	NA	NA	False	AGTAAA	-16	NA	148989846	148985039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148985724_148986536_148986712_148987104_148987243_148987397_148987562_148989709
ES.27851.3	chr5	-	2343	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-26	521	-26	-521	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAATGACTTTCACTTA	6738	False	NA	-3	True	AATAAA	-28	NA	148989876	148984032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.31	chr5	-	3153	1	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	-85	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1842	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTATTGTTGTCCTTT	8419	False	NA	NA	False	AGTAAA	-13	NA	148988195	148985042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_148985000_148988200
ES.27851.33	chr5	-	923	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	-6	1921	-6	22	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTACAGTGTCTTTT	6758	False	NA	NA	False	AAGAAA	-36	NA	148989856	148985432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.34	chr5	-	2268	2	FSM	ENSMUSG00000066551.13	ENSMUST00000123645.2	461	2	-59	-1748	0	20	multi-exon	FALSE	canonical	3	5649	junction_1	0	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAACTGTACAGTGTCTT	6764	False	NA	NA	False	AAGAAA	-34	NA	148989850	148985434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148987562_148989709
ES.27851.35	chr5	-	884	5	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3456.5444720848	1832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTGTAAGATTTGTT	6768	False	NA	NA	False	AAGAAA	-14	NA	148989846	148985454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_148985717_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ES.27851.7	chr5	-	3487	3	FSM	ENSMUSG00000066551.13	ENSMUST00000133667.2	654	3	5	-2838	0	-528	multi-exon	FALSE	canonical	3	5649	junction_2	1488.5	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGTTAAATGACTT	6793	False	NA	-10	True	AATAAA	-21	NA	148989821	148984039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148987251_148987397_148987562_148989709
ES.27851.9	chr5	-	3129	4	FSM	ENSMUSG00000066551.13	ENSMUST00000139443.8	923	4	-35	-2171	-6	-528	multi-exon	FALSE	canonical	3	5649	junction_3	1332.80464518331	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGTTAAATGACTT	6758	False	NA	-10	True	AATAAA	-21	NA	148989856	148984039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_148986712_148987104_148987251_148987397_148987562_148989709
ES.27852.1	chr5	+	169	1	Intergenic	novelGene_23160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAGGTCTACAA	1674	False	NA	NA	False	NA	NA	NA	149008631	149008800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149008600_149008800
ES.27853.1	chr5	-	329	3	Intergenic	novelGene_23161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTGTGGATTC	NA	False	NA	NA	False	AATAAA	-21	NA	149053541	149027653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149027839_149028454_149028515_149053457
ES.27853.2	chr5	-	180	1	Intergenic	novelGene_23162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGTGGCCCAGTGGT	3615	False	NA	-22	True	NA	NA	NA	149049450	149049270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149049300_149049400
ES.27854.1	chr5	-	201	1	Intergenic	novelGene_23163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCATATGTGAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	149068615	149068414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149068400_149068600
ES.27855.1	chr5	-	2052	1	FSM	ENSMUSG00000024437.7	ENSMUST00000025307.7	771	1	39	-1320	39	989	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149092980	149090928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149090900_149093000
ES.27856.1	chr5	+	3095	1	Intergenic	novelGene_23164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGCAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	149101566	149104661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149101600_149104700
ES.27857.1	chr5	+	1141	1	Antisense	novelGene_ENSMUSG00000066551.13_AS_novelGene_ENSMUSG00000097191.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCCATTTTTATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	149118843	149119984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_149118800_149120000
ES.27858.1	chr5	-	940	2	NNC	ENSMUSG00000097191.3	novel	1740	4	NA	NA	-212	-61136	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACACATGTGAATCTCT	6643	False	NA	NA	False	AATAAA	-40	NA	149121085	149117514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149118217_149120847
ES.27859.1	chr5	+	3986	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	-154	-5	-51	1	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTCATTTTGTGA	NA	False	NA	17	True	ATTAAA	-17	NA	149121318	149152245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.10	chr5	+	3620	9	NIC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	26	junction_3	124.581047916607	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121450	149152243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130704_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.11	chr5	+	5361	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	299	-1868	-14	1862	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTACAGTGTGGAGCT	NA	False	NA	NA	False	NA	NA	NA	149121458	149154106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.12	chr5	+	3715	10	NNC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_2	156.638610569003	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121464	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149122159_149122215_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.13	chr5	+	7031	7	NIC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	353	junction_3	20.7739152678438	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121464	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.14	chr5	+	3656	9	NNC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_4	132.438429090653	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121464	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135460_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.15	chr5	+	6529	8	NIC	ENSMUSG00000041264.17	novel	2931	9	NA	NA	-4	2	intron_retention	FALSE	canonical	3	110	junction_7	96.3037287090448	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTTCATTTTGTGAT	NA	False	NA	18	True	ATTAAA	-18	NA	149121468	149152246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.17	chr5	+	3313	11	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	164.30718182721	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121474	149152241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149122294_149122472_149124517_149124674_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.18	chr5	+	3419	8	NIC	ENSMUSG00000041264.17	novel	3604	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_2	135.483111380673	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121476	149152240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.2	chr5	+	3810	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	-51	-2	-51	2	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTTCATTTTGTGAT	NA	False	NA	18	True	ATTAAA	-18	NA	149121318	149152246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.20	chr5	+	3137	10	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	137.54792655204	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124674_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.21	chr5	+	3324	11	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	144.908384850567	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121476	149152241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.22	chr5	+	3632	9	NNC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	134.234810593229	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	False	NA	10	True	ATTAAA	-10	NA	149121477	149152238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135573_149138584_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.24	chr5	+	5676	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	5	-1854	1	1850	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAAACTTGGTTA	NA	False	NA	NA	False	NA	NA	NA	149121477	149154094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.25	chr5	+	3769	10	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	26	junction_4	158.181642736335	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121477	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130704_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.26	chr5	+	3656	9	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_2	157.435701160823	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121477	149152243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.27	chr5	+	3574	9	NNC	ENSMUSG00000041264.17	novel	3604	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_2	132.918913251651	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121477	149152240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124616_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.28	chr5	+	5283	8	NIC	ENSMUSG00000041264.17	novel	3577	9	NA	NA	1	1861	intron_retention	FALSE	canonical	3	30	junction_2	135.483111380673	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTACAGTGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	149121477	149154105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.29	chr5	+	3539	9	NIC	ENSMUSG00000041264.17	novel	3604	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_2	153.291745945436	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121487	149152241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130704_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.3	chr5	+	3290	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	-138	-4	-32	1	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTCATTTTGTGA	NA	False	NA	17	True	ATTAAA	-17	NA	149121337	149152245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.31	chr5	+	3133	10	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	158.789945883171	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121501	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.32	chr5	+	2897	9	NIC	ENSMUSG00000041264.17	novel	2931	9	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	140.810988118825	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121502	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.34	chr5	+	2367	8	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.618228791671	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121503	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149130739_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.35	chr5	+	3147	11	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	169.020117145859	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121505	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149137661_149137730_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.36	chr5	+	3079	10	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	135.337438361387	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121505	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.38	chr5	+	12354	6	ISM	ENSMUSG00000041264.17	ENSMUST00000150921.2	5216	7	-6638	0	-18	0	intron_retention	FALSE	canonical	3	353	junction_2	22.3874965103292	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121507	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.39	chr5	+	4810	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-16	-1863	-16	1862	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTACAGTGTGGAGCT	NA	False	NA	NA	False	NA	NA	NA	149121509	149154106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.4	chr5	+	3020	10	NNC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	161.489440850394	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121370	149152240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121427_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.43	chr5	+	3110	10	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.679534866253	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121514	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131255_149135460_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.44	chr5	+	3746	10	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	22	junction_3	164.666291797444	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121515	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.45	chr5	+	2809	8	NIC	ENSMUSG00000041264.17	novel	2931	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	151.843636007303	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	False	NA	10	True	ATTAAA	-10	NA	149121516	149152238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149146452_149146611_149150161_149150333_149150832
ES.27859.47	chr5	+	3168	11	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.939988745779	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121525	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149122346_149122472_149124517_149124687_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.48	chr5	+	4452	9	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	39	junction_1	117.693457762103	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121526	149152241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.49	chr5	+	5587	8	NNC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	134.240569919249	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121526	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121636_149123015_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.5	chr5	+	3703	9	FSM	ENSMUSG00000041264.17	ENSMUST00000119685.8	3604	9	-95	-4	12	0	multi-exon	FALSE	canonical	3	22	junction_2	126.885713833355	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121381	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.50	chr5	+	3891	10	NNC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_2	174.423140949719	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121527	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149122294_149122585_149124517_149124691_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.51	chr5	+	3592	9	NNC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	129.034879005639	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121528	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150167
ES.27859.52	chr5	+	3024	10	NNC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.251764061522	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121531	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121617_149124517_149124687_149125154_149125213_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.53	chr5	+	3104	10	NNC	ENSMUSG00000041264.17	novel	5216	7	NA	NA	133	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.658604515291	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121723	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149121878_149124517_149124687_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.54	chr5	+	6535	6	NIC	ENSMUSG00000041264.17	novel	3604	9	NA	NA	242	1	intron_retention	FALSE	canonical	1	3	junction_4	152.534061769822	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	NA	False	NA	14	True	ATTAAA	-14	NA	149121832	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149146452_149146611_149150161
ES.27859.55	chr5	+	2577	4	ISM	ENSMUSG00000041264.17	ENSMUST00000150921.2	5216	7	10344	0	10344	0	intron_retention	FALSE	canonical	3	358	junction_2	22.5437845585479	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	1418	False	NA	16	True	ATTAAA	-16	NA	149138489	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.56	chr5	+	10929	2	NNC	ENSMUSG00000041264.17	novel	5216	7	NA	NA	13049	0	intron_retention	TRUE	canonical	0	0	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	4123	False	NA	16	True	ATTAAA	-16	NA	149141194	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149147687_149147807
ES.27859.57	chr5	+	2111	2	NNC	ENSMUSG00000041264.17	novel	3792	8	NA	NA	18954	0	intron_retention	FALSE	canonical	1	3	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	2829	False	NA	16	True	ATTAAA	-16	NA	149147099	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149147128_149150161
ES.27859.58	chr5	+	1709	2	ISM	ENSMUSG00000041264.17	ENSMUST00000150921.2	5216	7	21888	2	21888	1	3prime_fragment	FALSE	canonical	3	110	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGGTTTCATTTTG	5763	False	NA	14	True	ATTAAA	-14	NA	149150033	149152242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149150333_149150832
ES.27859.6	chr5	+	3375	11	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	162.895211715999	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121383	149152241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149121617_149122294_149122472_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.27859.8	chr5	+	3572	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	227	-7	17	1	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTCATTTTGTGA	NA	False	NA	17	True	ATTAAA	-17	NA	149121386	149152245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ES.27859.9	chr5	+	3069	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	-137	-1	19	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121388	149152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ES.2786.1	chr10	+	157	1	Intergenic	novelGene_2126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAATAAATATTA	NA	False	NA	NA	False	NA	NA	NA	55003351	55003508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_55003400_55003500
ES.27860.1	chr5	+	2496	2	Intergenic	novelGene_23165	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTATGTATATGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	149155310	149158008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149156167_149156368
ES.27861.1	chr5	+	4851	1	NIC	ENSMUSG00000100783.2	novel	735	3	NA	NA	1795	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTCTAACAGGAATACT	NA	False	NA	NA	False	NA	NA	NA	149169936	149174787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149169900_149174800
ES.27862.1	chr5	+	869	6	NNC	ENSMUSG00000060063.10	novel	1251	5	NA	NA	-142	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8781719307178	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCATGGCTCAGATTGG	NA	False	NA	-88	True	AATAAA	-18	NA	149201434	149224855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149201453_149201868_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ES.27862.2	chr5	+	1001	4	NIC	ENSMUSG00000060063.10	novel	1251	5	NA	NA	167	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.4571575998762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCTAACGTCTTCAAGAG	NA	False	NA	8	True	ATTAAA	-20	NA	149201743	149224951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149201993_149209190_149209291_149222153_149222236_149224381
ES.27862.3	chr5	+	1043	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	191	17	191	-17	multi-exon	FALSE	canonical	3	24	junction_2	7.22841614740048	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGACGCTAACGTCTTC	NA	False	NA	3	True	ATTAAA	-15	NA	149201767	149224946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ES.27862.4	chr5	+	791	4	NNC	ENSMUSG00000060063.10	novel	1251	5	NA	NA	-1900	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9795211273157	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTAACGTCTTCAAGAGT	NA	False	NA	9	True	ATTAAA	-21	NA	149213920	149224952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149213988_149215985_149216057_149222153_149222236_149224381
ES.27863.1	chr5	-	590	2	Intergenic	novelGene_23166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCGGCTCAGAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	149286205	149284506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149285037_149286145
ES.27864.1	chr5	-	176	1	Intergenic	novelGene_23167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGTTTCTTCATGTT	NA	False	NA	NA	False	NA	NA	NA	149314671	149314495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149314500_149314700
ES.27865.1	chr5	+	125	1	Intergenic	novelGene_23168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	149318851	149318976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149318900_149319000
ES.27866.1	chr5	+	2355	1	FSM	ENSMUSG00000107164.2	ENSMUST00000201035.2	1721	1	-1064	430	-1064	-430	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTAGAATTTCCCCTT	NA	False	NA	NA	False	ATTAAA	-11	NA	149364261	149366616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149364300_149366600
ES.27866.2	chr5	+	2623	1	FSM	ENSMUSG00000107164.2	ENSMUST00000201035.2	1721	1	-902	0	-902	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTTAGTTACTTTTC	104	False	NA	NA	False	NA	NA	NA	149364423	149367046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149364400_149367000
ES.27867.1	chr5	-	4348	1	Antisense	novelGene_ENSMUSG00000029660.11_AS_novelGene_ENSMUSG00000107164.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTGTCTGCACTTAGAA	NA	False	NA	NA	False	NA	NA	NA	149369412	149365064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_149365100_149369400
ES.27868.1	chr5	-	1205	1	Intergenic	novelGene_23169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	149398429	149397224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149397200_149398400
ES.27869.1	chr5	-	179	1	Intergenic	novelGene_23170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGGAGCT	NA	False	NA	NA	False	NA	NA	NA	149467727	149467548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149467500_149467700
ES.2787.1	chr10	+	176	1	Intergenic	novelGene_2127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAGAAACCTTT	NA	False	NA	NA	False	NA	NA	NA	55169514	55169690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_55169500_55169700
ES.27870.1	chr5	+	917	4	ISM	ENSMUSG00000029658.18	ENSMUST00000202902.2	2574	23	67628	2	15583	-2	3prime_fragment	FALSE	canonical	1	2	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATCAGATTCTCGCTG	NA	False	NA	NA	False	NA	NA	NA	149520825	149535357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149521054_149522668_149522863_149529753_149529852_149534960
ES.27870.2	chr5	+	933	4	NNC	ENSMUSG00000029658.18	novel	2482	23	NA	NA	15585	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATCAGATTCTCGCTG	NA	False	NA	NA	False	NA	NA	NA	149520827	149535357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149521054_149522668_149522863_149529753_149529870_149534960
ES.27870.3	chr5	+	130	1	Intergenic	novelGene_23171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	149525381	149525511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149525400_149525500
ES.27870.4	chr5	+	676	2	NNC	ENSMUSG00000029658.18	novel	2482	23	NA	NA	28330	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATCAGATTCTCGCTG	4903	False	NA	NA	False	NA	NA	NA	149533572	149535357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149533852_149534960
ES.27871.1	chr5	+	1768	3	Antisense	novelGene_ENSMUSG00000080002.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	60	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATGTGTGGTTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	149578358	149588004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_149578485_149584119_149584669_149586911
ES.27871.2	chr5	+	1766	3	Antisense	novelGene_ENSMUSG00000080002.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATGTGTGGTTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	149578384	149588004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_149578509_149584119_149584669_149586911
ES.27872.1	chr5	+	4629	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	-57	-2	-57	2	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTGTTGTCTCT	NA	False	NA	16	True	AATAAA	-24	NA	149601637	149686066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.10	chr5	+	4356	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	147.106522251357	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601696	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149683463_149683673
ES.27872.13	chr5	+	4520	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.242476679712	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601700	149686064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601801_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.14	chr5	+	1984	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	10	-730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	191.554506313187	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCTTTTCTGTTTTCT	NA	False	NA	13	True	AATAAA	-9	NA	149601704	149683342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149624816_149624963_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.15	chr5	+	1804	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	10	-724	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	150.842015398454	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601704	149683348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.17	chr5	+	4544	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	151.735605174102	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCTTTGGCTTCTGTTG	NA	False	NA	11	True	AATAAA	-19	NA	149601708	149686061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673904_149674016_149677529_149677675_149682903
ES.27872.18	chr5	+	4374	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	147.106522251357	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601708	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149683152_149683331
ES.27872.2	chr5	+	1868	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	-12	2714	-12	-722	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTCTCCATTGTA	NA	False	NA	21	True	AATAAA	-17	NA	149601682	149683350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.20	chr5	+	4352	12	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	153.306854822402	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601711	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.21	chr5	+	2811	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	19	1740	19	252	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGCTCTCAAGTTCCT	NA	False	NA	NA	False	TATAAA	-13	NA	149601713	149684324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.22	chr5	+	3531	13	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	22	-947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.710554070179	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGCATTTTGTCTATT	NA	False	NA	NA	False	AATACA	-20	NA	149601716	149685117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149632764_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.23	chr5	+	3653	5	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	218.953191344634	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601716	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.24	chr5	+	1291	10	ISM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	22	22615	22	-11151	5prime_fragment	FALSE	canonical	3	505	junction_9	53.7028863283902	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATTCCCTGTGTACA	NA	False	NA	NA	False	AATACA	-25	NA	149601716	149663449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996
ES.27872.25	chr5	+	4357	13	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	161.147878946292	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601716	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.26	chr5	+	6045	14	ISM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	22	3732	22	-1740	5prime_fragment	FALSE	canonical	3	479	junction_13	53.1317442638646	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCCCCTACACACACAC	NA	False	NA	NA	False	NA	NA	NA	149601716	149682332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529
ES.27872.28	chr5	+	4526	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	151.783764693362	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601719	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650236_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.29	chr5	+	4430	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	156.768136177956	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601719	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.3	chr5	+	3624	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	-6	952	-6	-952	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACCTTGCATTTTGT	NA	False	NA	NA	False	AATACA	-15	NA	149601688	149685112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.30	chr5	+	1890	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	26	-724	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	189.297884005313	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601720	149683348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619445_149619508_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.31	chr5	+	4244	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	147.106522251357	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601720	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149684652_149684949
ES.27872.32	chr5	+	4467	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	151.633419395432	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601722	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663049_149668945_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.33	chr5	+	1789	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	28	-730	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.26931364379	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCTTTTCTGTTTTCT	NA	False	NA	13	True	AATAAA	-9	NA	149601722	149683342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648922_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.34	chr5	+	4490	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	146.946796313311	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601722	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.36	chr5	+	4384	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	147.106522251357	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149601743	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149685752_149685887
ES.27872.37	chr5	+	4580	16	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	189.297884005313	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601744	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619445_149619508_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.38	chr5	+	1613	13	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	51	-725	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	161.147878946292	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTGTTTTCTCCATT	NA	False	NA	18	True	AATAAA	-14	NA	149601745	149683347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.39	chr5	+	4404	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	53	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	154.893206195249	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGCTTTGGCTTCTGTTG	NA	False	NA	11	True	AATAAA	-19	NA	149601747	149686061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.4	chr5	+	1804	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	0	-724	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	146.946796313311	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601694	149683348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.40	chr5	+	1812	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	73	-724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	151.633419395432	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601767	149683348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668859_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.41	chr5	+	3759	6	NNC	ENSMUSG00000051950.11	novel	1437	2	NA	NA	4734	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.571288958757	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	False	NA	13	True	AATAAA	-21	NA	149606428	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149606549_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.42	chr5	+	187	1	Intergenic	novelGene_23176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCAATAAAGAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	149610294	149610481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149610300_149610500
ES.27872.43	chr5	+	3975	12	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	-14079	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	204.352838601836	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	7321	False	NA	13	True	AATAAA	-21	NA	149648917	149686063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668881_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149683463_149683673
ES.27872.44	chr5	+	5163	1	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	776	-727	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCTGTTTTCTCCA	NA	False	NA	16	True	AATAAA	-12	NA	149678182	149683345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149678200_149683300
ES.27872.5	chr5	+	4323	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	200.427922308286	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601694	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149669969_149670070_149673895_149674016_149677529_149677675_149682903_149683858_149683988
ES.27872.6	chr5	+	3748	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	1	821	1	-821	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGCAAAGAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-10	NA	149601695	149685243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.7	chr5	+	4511	15	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	152.245907421285	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601695	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653477_149656144_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.8	chr5	+	4455	14	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	157.240929974265	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTGGCTTCTGTTGT	NA	False	NA	12	True	AATAAA	-20	NA	149601695	149686062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ES.27872.9	chr5	+	5295	13	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	1	-726	intron_retention	FALSE	canonical	0	0	junction_9	163.405341269971	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTCTGTTTTCTCCAT	NA	False	NA	17	True	AATAAA	-13	NA	149601695	149683346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149668890_149669005_149669969_149670070_149673895_149677675_149682903
ES.27873.1	chr5	-	5511	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	90	-1799	-39	-458	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGATGCTCTATCTC	NA	False	NA	NA	False	CATAAA	-25	NA	149559713	149538209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.10	chr5	-	3630	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	-126	-264	3	-37	multi-exon	FALSE	canonical	3	9	junction_6	344.38590613402	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGTTCTGAAGTCAAT	NA	False	NA	-26	True	NA	NA	NA	149559800	149540045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.100	chr5	-	175	2	Antisense	novelGene_ENSMUSG00000106674.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149574850	149551569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_149551665_149574770
ES.27873.101	chr5	-	202	1	Intergenic	novelGene_23172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCCACAACCCTCAGC	NA	False	NA	NA	False	NA	NA	NA	149563512	149563310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149563300_149563500
ES.27873.102	chr5	-	156	2	Intergenic	novelGene_23173	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	9978	False	NA	NA	False	NA	NA	NA	149609104	149563357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149563486_149609076
ES.27873.103	chr5	-	1095	2	Antisense	novelGene_ENSMUSG00000106674.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTCTCTCCATCATGA	NA	False	NA	NA	False	AGTAAA	-19	NA	149572451	149570846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_149571694_149572203
ES.27873.104	chr5	-	542	2	Intergenic	novelGene_23174	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGACTCTCTGCATAAA	NA	False	NA	NA	False	AATAAA	-15	NA	149572400	149571348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149571694_149572203
ES.27873.105	chr5	-	463	2	Intergenic	novelGene_23175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGACTCTCTGCATA	NA	False	NA	NA	False	AATAAA	-13	NA	149572453	149571350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149571694_149572333
ES.27873.11	chr5	-	3759	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	4	-37	intron_retention	TRUE	non_canonical	0	0	junction_10	335.883949723206	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGTTCTGAAGTCAAT	NA	False	NA	-26	True	NA	NA	NA	149559799	149540045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551102_149552661_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.12	chr5	-	3740	20	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-4	-38	combination_of_known_junctions	FALSE	canonical	3	48	junction_17	470.122333345534	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGTTCTGAAGTCAA	NA	False	NA	-27	True	NA	NA	NA	149559820	149540046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434_149559625_149559784
ES.27873.15	chr5	-	3725	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-3	-44	intron_retention	FALSE	canonical	0	0	junction_8	336.231558452882	1399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAATTCTGTTCTGA	NA	False	NA	-33	True	NA	NA	NA	149559806	149540052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548607_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.18	chr5	-	3404	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559864	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
ES.27873.19	chr5	-	4152	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	13	2	intron_retention	FALSE	canonical	3	48	junction_16	426.1520351863	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559790	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.2	chr5	-	3847	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	-39	-6	-1	6	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTGTTGTCCTTCAA	NA	False	NA	17	True	TTTAAA	-19	NA	149559842	149540002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.21	chr5	-	7237	16	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	3	299	3	2	intron_retention	FALSE	canonical	3	1194	junction_12	112.977401870168	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559800	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ES.27873.22	chr5	-	7105	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	18	2	intron_retention	FALSE	canonical	3	76	junction_16	328.855947756765	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559785	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756
ES.27873.23	chr5	-	7845	15	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	4	2	intron_retention	FALSE	canonical	3	48	junction_13	450.706248513352	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559799	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.25	chr5	-	5156	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	2	intron_retention	FALSE	canonical	3	1194	junction_12	109.510202150302	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559801	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149557353_149559434
ES.27873.28	chr5	-	3441	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	5	2	intron_retention	FALSE	canonical	3	48	junction_17	495.072834147776	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559811	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559623
ES.27873.29	chr5	-	3324	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	2	intron_retention	FALSE	canonical	3	50	junction_17	324.805078624621	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGCTTTGTCTCCGA	NA	False	NA	-4	True	AATAAA	-26	NA	149559813	149540307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559623
ES.27873.3	chr5	-	3663	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTTTTGTTGTCCTTC	NA	False	NA	15	True	TTTAAA	-17	NA	149559820	149540004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
ES.27873.32	chr5	-	3710	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	-469	-1	-302	1	multi-exon	FALSE	canonical	3	9	junction_6	344.38590613402	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGCTTTGTCTCCG	NA	False	NA	-5	True	AATAAA	-25	NA	149560143	149540308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.33	chr5	-	3492	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_7	336.133160711799	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559800	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548439_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.34	chr5	-	8726	15	NIC	ENSMUSG00000029657.16	novel	3240	17	NA	NA	809	0	intron_retention	FALSE	canonical	3	48	junction_14	461.725672817503	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149558827	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149542014_149542210_149542331_149542425_149542534_149543341_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294
ES.27873.35	chr5	-	3347	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	13	0	intron_retention	FALSE	canonical	1	5	junction_12	334.504208858341	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559790	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553356_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.36	chr5	-	4799	15	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	51	0	intron_retention	FALSE	canonical	0	0	junction_5	352.468004047958	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559585	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542331_149542425_149544149_149546929_149547062_149548433_149548611_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.38	chr5	-	7992	15	NIC	ENSMUSG00000029657.16	novel	3240	17	NA	NA	-31	0	intron_retention	FALSE	canonical	3	48	junction_13	525.070879569062	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559705	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559623
ES.27873.39	chr5	-	3812	20	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-314	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_17	470.122333345534	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149560155	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434_149559625_149559784
ES.27873.4	chr5	-	4984	16	ISM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	2544	11	93	-11	3prime_fragment	FALSE	canonical	3	1194	junction_12	112.977401870168	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTCATCTTGAGTT	NA	False	NA	0	True	TTTAAA	-2	NA	149557259	149540019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ES.27873.42	chr5	-	4941	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	493.694012296866	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559801	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543349_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149557353_149559434_149559697_149559784
ES.27873.43	chr5	-	6303	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-31	0	intron_retention	FALSE	canonical	3	48	junction_16	431.559680444625	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559705	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.45	chr5	-	3459	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	327.320811276658	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559701	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543281_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.46	chr5	-	4250	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	11	0	intron_retention	FALSE	canonical	3	48	junction_16	421.568951208266	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559625	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.47	chr5	-	3396	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	335.594138216889	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559705	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552888_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.5	chr5	-	3599	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	-15	intron_retention	FALSE	canonical	0	0	junction_7	441.82508399172	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTGTGTCATCTTG	NA	False	NA	-4	True	NA	NA	NA	149559800	149540023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548429_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559623
ES.27873.50	chr5	-	3363	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	410.766792748259	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559821	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542421_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
ES.27873.51	chr5	-	3486	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_5	332.046323945432	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559794	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543462_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.52	chr5	-	3610	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-302	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	501.03382010488	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149560143	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559784
ES.27873.54	chr5	-	3384	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	494.888679963035	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559844	149540309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542008_149542206_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548429_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
ES.27873.55	chr5	-	6417	15	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	1194	junction_10	89.5568454749751	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559714	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149557353_149559434
ES.27873.57	chr5	-	2975	16	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	1803	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	356.306135538279	1396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149555549	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542218_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498
ES.27873.58	chr5	-	3596	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	1194	junction_11	110.589171457923	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559702	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.61	chr5	-	4748	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-31	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	335.883949723206	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559705	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551543_149551754_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.62	chr5	-	3861	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_18	437.414499581855	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559801	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149558949_149559313_149559434
ES.27873.63	chr5	-	4041	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1194	junction_11	105.15968140761	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559801	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.64	chr5	-	3325	17	NNC	ENSMUSG00000029657.16	novel	3240	17	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	460.483831828002	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559766	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542008_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.65	chr5	-	4866	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	48	junction_15	427.665903480743	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559699	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.66	chr5	-	4305	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1194	junction_11	93.2405952026798	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559800	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.68	chr5	-	2873	15	NNC	ENSMUSG00000029657.16	novel	3054	17	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	363.019374588369	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559706	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554306_149559623
ES.27873.69	chr5	-	3390	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-32	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	514.279843845223	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559706	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.7	chr5	-	3572	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	-35	combination_of_known_junctions	FALSE	canonical	1	2	junction_18	501.03382010488	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTGAAGTCAATTT	NA	False	NA	-24	True	NA	NA	NA	149559839	149540043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559784
ES.27873.70	chr5	-	3582	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_16	431.188008605796	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559806	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555796_149555876_149557294_149557353_149559434
ES.27873.71	chr5	-	3351	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	8	-1	intron_retention	FALSE	canonical	1	12	junction_15	341.569447550568	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559795	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149557294_149557353_149559434
ES.27873.72	chr5	-	4774	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	1194	junction_11	110.521190700019	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559705	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.73	chr5	-	3615	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	48	junction_16	428.311588226371	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTGGCTTTGTCTC	NA	False	NA	-7	True	AATAAA	-23	NA	149559704	149540310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.74	chr5	-	5583	16	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	1194	junction_12	108.855378063435	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCTGTTGGCTTTGTC	NA	False	NA	-9	True	AATAAA	-21	NA	149559706	149540312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554975_149555498_149557353_149559434
ES.27873.75	chr5	-	3394	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	335.626852446352	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGCTGTTGGCTTTGTC	NA	False	NA	-9	True	AATAAA	-21	NA	149559706	149540312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553490_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.76	chr5	-	4750	16	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-32	-5	intron_retention	FALSE	canonical	3	1194	junction_10	87.3446811965865	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAAGCTGTTGGCTTTG	NA	False	NA	-11	True	AATAAA	-19	NA	149559706	149540314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.77	chr5	-	3994	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-312	-5	intron_retention	FALSE	canonical	3	35	junction_18	425.781666793884	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAAGCTGTTGGCTTTG	NA	False	NA	-11	True	AATAAA	-19	NA	149560153	149540314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555876_149557294_149557353_149559434_149559697_149559784
ES.27873.8	chr5	-	3697	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-5	-35	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	319.198151430335	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTGAAGTCAATTT	NA	False	NA	-24	True	NA	NA	NA	149559821	149540043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559697_149559784
ES.27873.80	chr5	-	3634	20	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	495.674508963861	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAAGCTGTTGGCTTTG	NA	False	NA	-11	True	AATAAA	-19	NA	149559769	149540314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149556874_149556928_149557294_149557353_149559434
ES.27873.81	chr5	-	7743	16	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	3	-6	intron_retention	FALSE	canonical	3	48	junction_14	441.074697629425	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	False	NA	-12	True	AATAAA	-18	NA	149559800	149540315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.82	chr5	-	5090	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	510.553019580209	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	False	NA	-12	True	AATAAA	-18	NA	149559749	149540315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149544274_149546113_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559623
ES.27873.83	chr5	-	3491	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	5	-6	intron_retention	FALSE	canonical	0	0	junction_4	327.320811276658	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	False	NA	-12	True	AATAAA	-18	NA	149559811	149540315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542522_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.85	chr5	-	3417	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	336.231558452882	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	False	NA	-12	True	AATAAA	-18	NA	149559761	149540315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548607_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.90	chr5	-	3302	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	-4	504	-4	121	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTGCTTTCATTATT	NA	False	NA	NA	False	NA	NA	NA	149559807	149540512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.94	chr5	-	5184	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	94	intron_retention	FALSE	canonical	3	48	junction_17	430.609723025403	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGTGTAGTCTCTGA	NA	False	NA	NA	False	AAAAAG	-9	NA	149559801	149540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294
ES.27873.95	chr5	-	2897	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	-3	91	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	319.198151430335	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAATCTGTGTAGTCTC	NA	False	NA	NA	False	AAAAAG	-6	NA	149559806	149540828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559697_149559784
ES.27873.96	chr5	-	3093	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	2	85	intron_retention	FALSE	canonical	3	48	junction_17	419.554775776112	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGCTTGAATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	149559801	149540834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
ES.27873.97	chr5	-	2906	18	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	1	11	intron_retention	FALSE	non_canonical	0	0	junction_9	336.147047243081	1391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACTGAGTCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	149559815	149540908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551008_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.98	chr5	-	2361	8	ISM	ENSMUSG00000029657.16	ENSMUST00000201431.4	4764	12	155	7402	-12	1900	5prime_fragment	FALSE	canonical	3	1194	junction_2	91.9937886101945	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGTGTTTTAAGGATA	NA	False	NA	NA	False	NA	NA	NA	149559648	149551548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ES.27873.99	chr5	-	5058	8	NIC	ENSMUSG00000029657.16	novel	4764	12	NA	NA	-303	1900	intron_retention	FALSE	canonical	3	48	junction_7	584.23960698274	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGTGTTTTAAGGATA	NA	False	NA	NA	False	NA	NA	NA	149560144	149551548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294
ES.27874.1	chr5	-	178	1	Intergenic	novelGene_23177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6187	False	NA	NA	False	NA	NA	NA	149763317	149763139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_149763100_149763300
ES.27875.1	chr5	+	178	1	Intergenic	novelGene_23178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGAAAAAAAAACTTTAAT	NA	False	NA	NA	False	NA	NA	NA	149889066	149889244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149889100_149889200
ES.27876.1	chr5	+	181	1	Intergenic	novelGene_23179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTTTTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	149924166	149924347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_149924200_149924300
ES.27877.1	chr5	+	2316	6	NNC	ENSMUSG00000053368.14	novel	2836	2	NA	NA	-3623	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.8	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTGTTACTTT	NA	False	NA	NA	False	AATAAA	-11	NA	149985711	150005649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_149985928_149987142_149987215_149989684_149989915_149990564_149990976_149993716_149993864_150004409
ES.27878.1	chr5	+	137	1	Intergenic	novelGene_23180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	150035267	150035404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150035300_150035400
ES.27879.1	chr5	+	1651	2	NNC	ENSMUSG00000056602.14	novel	687	5	NA	NA	-24	-118177	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGATCCATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	150042085	150065193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150042277_150063733
ES.27879.2	chr5	+	143	1	Intergenic	novelGene_23181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	150057466	150057609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150057500_150057600
ES.2788.1	chr10	+	117	1	Intergenic	novelGene_2128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55962759	55962876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_55962800_55962900
ES.27880.1	chr5	-	186	1	Intergenic	novelGene_23182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	150094063	150093877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150093900_150094100
ES.27881.1	chr5	+	4246	1	Intergenic	novelGene_23183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	150114886	150119132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150114900_150119100
ES.27882.1	chr5	+	10649	61	NIC	ENSMUSG00000056602.14	novel	4379	20	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_34	8.06611568366226	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	1217	False	NA	9	True	ATTAAA	-15	NA	150119872	150421218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.10	chr5	+	3950	17	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	143322	0	1780	0	3prime_fragment	FALSE	canonical	3	19	junction_2	7.32264253872876	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	9	True	ATTAAA	-15	NA	150362174	150421218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.11	chr5	+	2120	13	NNC	ENSMUSG00000056602.14	novel	3288	13	NA	NA	-5541	-7903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.9249332568518	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATGAGCCTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	150369053	150405356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150369080_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957
ES.27882.12	chr5	+	3833	15	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	150233	0	-5509	0	3prime_fragment	FALSE	canonical	3	26	junction_1	6.43650304346789	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	9	True	ATTAAA	-15	NA	150369085	150421218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.13	chr5	+	3646	15	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	150309	111	-5433	7	3prime_fragment	FALSE	canonical	3	26	junction_1	6.43650304346789	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGTTGATAATTCTGT	NA	False	NA	NA	False	AATACA	-21	NA	150369161	150421107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.14	chr5	+	182	1	Intergenic	novelGene_23188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAATAATACCT	NA	False	NA	NA	False	NA	NA	NA	150372216	150372398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150372200_150372400
ES.27882.15	chr5	+	1068	3	ISM	ENSMUSG00000056602.14	ENSMUST00000201196.2	2204	11	21083	4818	-8383	0	internal_fragment	FALSE	canonical	3	27	junction_2	1.5	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150402258	150415448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150402337_150404957_150405042_150414542
ES.27882.2	chr5	+	4449	32	NNC	ENSMUSG00000056602.14	novel	592	4	NA	NA	-52	-3484	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_31	3.83857413694026	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGGCATTGTTTAAAA	1223	False	NA	NA	False	AATAAA	-30	NA	150119878	150333669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150333490
ES.27882.3	chr5	+	4592	32	NNC	ENSMUSG00000056602.14	novel	592	4	NA	NA	-51	-3340	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_31	3.83857413694026	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGAAATCATTCTCTG	1224	False	NA	NA	False	AATAAA	-13	NA	150119879	150333813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150333490
ES.27882.4	chr5	+	10557	61	NNC	ENSMUSG00000056602.14	novel	4379	20	NA	NA	-30	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	8.4685529394867	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAGACATGTTG	1245	False	NA	-55	True	AAAAAG	-1	NA	150119900	150421154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342024_150346180_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.5	chr5	+	10486	61	NNC	ENSMUSG00000056602.14	novel	4379	20	NA	NA	1865	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.49723811338458	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTATTTTTATATGT	3140	False	NA	8	True	ATTAAA	-14	NA	150121795	150421217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150121962_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.6	chr5	+	3168	1	Intergenic	novelGene_23185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150286575	150289743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150286600_150289700
ES.27882.7	chr5	+	6768	33	NNC	ENSMUSG00000056602.14	novel	10893	61	NA	NA	3828	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	9.36577671298542	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	9	True	ATTAAA	-15	NA	150326945	150421218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381388_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.8	chr5	+	5650	27	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	123114	110	8793	8	3prime_fragment	FALSE	canonical	3	15	junction_1	8.76214288453424	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTGATAATTCTGTT	NA	False	NA	NA	False	AATACA	-22	NA	150341966	150421108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ES.27882.9	chr5	+	4124	16	ISM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	141759	4786	217	984	internal_fragment	FALSE	canonical	3	15	junction_1	7.9386536781889	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGATTATGGCTATGC	NA	False	NA	NA	False	NA	NA	NA	150360611	150416432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542
ES.27883.1	chr5	-	238	1	Intergenic	novelGene_23184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTACTAGAAAGAATA	NA	False	NA	NA	False	TTTAAA	-39	NA	150135415	150135177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150135200_150135400
ES.27884.1	chr5	-	177	1	Intergenic	novelGene_23186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGTTCAATCA	NA	False	NA	NA	False	NA	NA	NA	150349419	150349242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150349200_150349400
ES.27885.1	chr5	-	143	1	Intergenic	novelGene_23187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	150366685	150366542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150366500_150366700
ES.27886.1	chr5	-	3693	1	Genic_Genomic	ENSMUSG00000106738.2	novel	NA	NA	NA	NA	-586	549	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGCCTTGCATTGCCC	NA	False	NA	NA	False	NA	NA	NA	150426355	150422662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_150422700_150426400
ES.27887.1	chr5	-	287	1	Intergenic	novelGene_23189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCGCTTTTAATTGT	NA	False	NA	NA	False	NA	NA	NA	150446041	150445754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150445800_150446000
ES.27888.1	chr5	+	10421	25	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-36	5	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	42.5159283876839	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTAAGTATGGTTACTT	334	False	NA	18	True	AATAAA	-27	NA	150446058	150493217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446364_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.10	chr5	+	2265	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-2	5614	0	-1040	intron_retention	FALSE	canonical	3	58	junction_1	9.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACATTTTCTTGCA	370	False	NA	NA	False	ATTAAA	-9	NA	150446094	150454827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150446362_150446639_150446745_150452934
ES.27888.11	chr5	+	10294	27	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	42.7416900813002	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	370	False	NA	12	True	AATAAA	-21	NA	150446094	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460593_150462110_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492632
ES.27888.12	chr5	+	10463	27	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	39.6630221420883	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	370	False	NA	14	True	AATAAA	-23	NA	150446094	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476470_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.13	chr5	+	10398	26	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_25	44.2448821899211	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTACTGGCTAAGTATG	370	False	NA	11	True	AATAAA	-20	NA	150446094	150493210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492632
ES.27888.14	chr5	+	10259	26	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	41.7693859183972	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	370	False	NA	14	True	AATAAA	-23	NA	150446094	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460426_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.15	chr5	+	10548	27	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.4035278201901	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	371	False	NA	12	True	AATAAA	-21	NA	150446095	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446392_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491223_150492403
ES.27888.17	chr5	+	10349	26	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	43.6939538151447	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	372	False	NA	13	True	AATAAA	-22	NA	150446096	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492632
ES.27888.18	chr5	+	8216	16	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	-11	17007	1	-1860	5prime_fragment	FALSE	canonical	3	58	junction_1	22.6044243456895	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTAAACAGAAATCT	373	False	NA	NA	False	AATAAA	-19	NA	150446097	150476205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671
ES.27888.19	chr5	+	10293	27	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	38.4468433465429	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCTAAGTATGGTTA	381	False	NA	15	True	AATAAA	-24	NA	150446105	150493214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492632
ES.27888.2	chr5	+	10561	27	FSM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	-38	-6	-24	6	multi-exon	FALSE	canonical	3	58	junction_1	34.4104188157733	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAAGTATGGTTACTTT	346	False	NA	19	True	AATAAA	-28	NA	150446070	150493218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.20	chr5	+	11503	27	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.3534193445761	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	390	False	NA	14	True	AATAAA	-23	NA	150446114	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446556_150446639_150447542_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.21	chr5	+	8626	19	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.1465079287591	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	396	False	NA	12	True	AATAAA	-21	NA	150446120	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476470_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.23	chr5	+	10343	26	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	46.1802728445816	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	418	False	NA	13	True	AATAAA	-22	NA	150446142	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472326_150474296_150474479_150475671_150475860_150476470_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.24	chr5	+	10365	26	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	322	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.1717433801265	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	752	False	NA	13	True	AATAAA	-22	NA	150446476	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455679_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.25	chr5	+	10182	25	NNC	ENSMUSG00000041147.11	novel	864	3	NA	NA	-2113	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	42.341842156692	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	4733	False	NA	13	True	AATAAA	-22	NA	150450457	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150450577_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.26	chr5	+	12362	26	NIC	ENSMUSG00000041147.11	novel	634	6	NA	NA	-2109	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	39.0438932484966	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	4737	False	NA	13	True	AATAAA	-22	NA	150450461	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150452665_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.27	chr5	+	10286	26	NNC	ENSMUSG00000041147.11	novel	634	6	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.1491181833418	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	6824	False	NA	12	True	AATAAA	-21	NA	150452548	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150452665_150452934_150453175_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.28	chr5	+	9621	20	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	11947	0	5485	0	3prime_fragment	FALSE	canonical	3	64	junction_2	28.8976606707838	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	314	False	NA	13	True	AATAAA	-22	NA	150458055	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.29	chr5	+	7684	16	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	10138	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	43.1553266958115	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	4967	False	NA	13	True	AATAAA	-22	NA	150462708	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150466923_150471405_150471476_150471953_150472326_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.30	chr5	+	7073	13	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	11628	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.0551264516023	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	6457	False	NA	14	True	AATAAA	-23	NA	150464198	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150473029_150479350_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.31	chr5	+	5961	15	NIC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-11568	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	44.9107959385796	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	6521	False	NA	14	True	AATAAA	-23	NA	150464262	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.32	chr5	+	5463	16	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-10938	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	43.8580538657256	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	7151	False	NA	12	True	AATAAA	-21	NA	150464892	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491223_150492403
ES.27888.33	chr5	+	6365	17	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-9720	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	38.3028637963273	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGGCTAAGTATGGTT	8369	False	NA	14	True	AATAAA	-23	NA	150466110	150493213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150478991_150479330_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.34	chr5	+	4122	17	NIC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-9465	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	38.2197592875727	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	8624	False	NA	12	True	AATAAA	-21	NA	150466365	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492378
ES.27888.35	chr5	+	4911	16	NIC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-9232	0	intron_retention	FALSE	canonical	3	70	junction_2	24.4389488771965	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	8857	False	NA	12	True	AATAAA	-21	NA	150466598	150493211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.36	chr5	+	4236	17	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	20640	-521	-9082	-61	3prime_fragment	FALSE	canonical	3	70	junction_2	23.6801604724292	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCTATTTACAAAATTT	9007	False	NA	NA	False	AATAAA	-17	NA	150466748	150493733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.37	chr5	+	3541	16	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	22249	2	-7473	-1	3prime_fragment	FALSE	canonical	3	70	junction_1	21.2347723217263	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTACTGGCTAAGTATG	NA	False	NA	11	True	AATAAA	-20	NA	150468357	150493210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.38	chr5	+	3461	14	NNC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	-3941	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	36.8079937291733	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATTACTGGCTAAGTAT	NA	False	NA	10	True	AATAAA	-19	NA	150471889	150493209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150472326_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.39	chr5	+	4304	9	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	32039	6	807	-5	3prime_fragment	FALSE	canonical	3	128	junction_5	12.4799839743487	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGATTACTGGCTAAG	NA	False	NA	7	True	AATAAA	-16	NA	150478147	150493206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.4	chr5	+	10747	27	FSM	ENSMUSG00000041147.11	ENSMUST00000044620.11	10724	27	-20	-3	-20	2	multi-exon	FALSE	canonical	3	12	junction_1	37.750504522668	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCTAAGTATGGTTA	350	False	NA	15	True	AATAAA	-24	NA	150446074	150493214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.40	chr5	+	2230	10	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	189	40060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	60.3700522600117	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGCAGCAAGCACATTAC	NA	False	NA	NA	False	NA	NA	NA	150480619	150533854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403_150493226_150499253_150499465_150533770
ES.27888.41	chr5	+	1697	1	NIC	ENSMUSG00000041147.11	novel	10724	27	NA	NA	2404	986	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	150482834	150484531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150482800_150484500
ES.27888.42	chr5	+	1523	5	ISM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	37781	-4	3459	4	3prime_fragment	FALSE	canonical	3	128	junction_1	13.8744369255116	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTAAGTATGGTTACT	NA	False	NA	17	True	AATAAA	-26	NA	150483889	150493216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.43	chr5	+	2390	1	FSM	ENSMUSG00000107178.2	ENSMUST00000201648.2	4048	1	-1199	2857	-1199	-2857	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	150484576	150486966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150484600_150487000
ES.27888.44	chr5	+	4012	1	FSM	ENSMUSG00000041147.11	ENSMUST00000201165.2	1742	1	15	-2285	15	2285	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTCTGGGCTCAACT	NA	False	NA	NA	False	AATAAA	-18	NA	150492067	150496079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150492100_150496100
ES.27888.5	chr5	+	10453	26	NIC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-14	4	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	37.9278051039076	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTAAGTATGGTTACT	356	False	NA	17	True	AATAAA	-26	NA	150446080	150493216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.6	chr5	+	13321	26	NIC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-14	2290	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	37.9278051039076	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGGCTCAACTATTTA	356	False	NA	NA	False	AATAAA	-23	NA	150446080	150496084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.7	chr5	+	10367	27	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	38.5238917645452	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	357	False	NA	13	True	AATAAA	-22	NA	150446081	150493212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460426_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.8	chr5	+	10491	27	NNC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	39.1960819500711	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCTAAGTATGGTTA	361	False	NA	15	True	AATAAA	-24	NA	150446085	150493214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483943_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ES.27888.9	chr5	+	1221	3	ISM	ENSMUSG00000041147.11	ENSMUST00000202975.4	2534	8	-8	6664	-6	472	5prime_fragment	FALSE	canonical	3	58	junction_1	9.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTGTAACATTTATTA	364	False	NA	NA	False	AGTAAA	-16	NA	150446088	150453777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150446362_150446639_150446745_150452934
ES.27889.1	chr5	-	220	1	Intergenic	novelGene_23190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTAATCTTTTGAAAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	150448977	150448757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150448800_150449000
ES.2789.1	chr10	+	2151	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	-18	7	-18	-7	multi-exon	FALSE	canonical	2	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATTTATAAAGCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55982994	55992969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_55983126_55990949
ES.2789.2	chr10	+	253	1	Intergenic	novelGene_2129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATCTGTACTTCCTTTC	NA	False	NA	NA	False	TATAAA	-26	NA	55983628	55983881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_55983600_55983900
ES.27890.1	chr5	-	351	1	Intergenic	novelGene_23191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTTTTTACAAA	NA	False	NA	NA	False	NA	NA	NA	150458564	150458213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150458200_150458600
ES.27891.1	chr5	-	5683	1	FSM	ENSMUSG00000118914.1	ENSMUST00000101833.4	141	1	-3691	-1851	-3691	1851	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCACCACC	NA	False	NA	NA	False	NA	NA	NA	150474609	150468926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150468900_150474600
ES.27891.2	chr5	-	3629	2	Genic_Genomic	ENSMUSG00000118914.1	novel	141	1	NA	NA	-3691	1793	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	150474609	150468984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_150472299_150474294
ES.27891.3	chr5	-	3377	2	Genic_Genomic	ENSMUSG00000118914.1	novel	141	1	NA	NA	-3690	24	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCATACATTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	150474608	150470753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_150471473_150471950
ES.27891.4	chr5	-	1363	3	Genic_Genomic	ENSMUSG00000118914.1	novel	141	1	NA	NA	-3691	5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	150474609	150470772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_-_150471473_150471950_150472299_150474294
ES.27891.5	chr5	-	3837	1	FSM	ENSMUSG00000118914.1	ENSMUST00000101833.4	141	1	-3691	-5	-3691	5	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	150474609	150470772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150470800_150474600
ES.27891.6	chr5	-	2230	1	Antisense	novelGene_ENSMUSG00000041147.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAAACCACGTCAAAAT	NA	False	NA	NA	False	AAAAAG	-35	NA	150474609	150472379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_150472400_150474600
ES.27892.1	chr5	-	149	1	Intergenic	novelGene_23192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTATT	NA	False	NA	NA	False	NA	NA	NA	150479427	150479278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150479300_150479400
ES.27893.1	chr5	-	5618	1	FSM	ENSMUSG00000106980.2	ENSMUST00000201213.2	266	1	-3076	-2276	-3076	2276	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCTAGAAAAGGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	150497639	150492021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150492000_150497600
ES.27893.2	chr5	-	7807	4	FSM	ENSMUSG00000041132.12	ENSMUST00000202031.4	1864	4	-5937	-6	-5937	3	multi-exon	FALSE	canonical	2	4	junction_1	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTTTTCCATTGAATTT	NA	False	NA	3	True	ATTAAA	-25	NA	150506393	150495105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150496458_150497464_150497542_150499714_150499804_150500104
ES.27893.3	chr5	-	1861	5	FSM	ENSMUSG00000041132.12	ENSMUST00000016279.11	1905	5	44	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_4	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGGTTTTCCATTGAA	4607	False	NA	0	True	ATTAAA	-22	NA	150517946	150495108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150496458_150497464_150497542_150499714_150499804_150500104_150500233_150517728
ES.27893.4	chr5	-	3892	5	ISM	ENSMUSG00000041132.12	ENSMUST00000202279.4	949	6	15035	-1014	-2436	-4	3prime_fragment	FALSE	canonical	0	0	junction_4	2.48746859276655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTATATTGGGTTTTC	NA	False	NA	-7	True	ATTAAA	-15	NA	150502892	150495115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_150496458_150497464_150497542_150499714_150499804_150500104_150500233_150500636
ES.27893.5	chr5	-	2769	1	NIC	ENSMUSG00000041132.12	novel	1371	3	NA	NA	1	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGGATATGTCTTGT	4561	False	NA	NA	False	AATAAA	-10	NA	150517992	150515223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150515200_150518000
ES.27893.6	chr5	-	1363	3	FSM	ENSMUSG00000041132.12	ENSMUST00000200840.2	1371	3	1	7	1	-4	multi-exon	FALSE	canonical	3	10	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGGATATGTCTTGT	4561	False	NA	NA	False	AATAAA	-10	NA	150517992	150515223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150516025_150516604_150516903_150517728
ES.27893.7	chr5	-	1353	3	NNC	ENSMUSG00000041132.12	novel	1371	3	NA	NA	324	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTTAGAGGAAGTTAGTT	4950	False	NA	NA	False	AATAAA	-13	NA	150517603	150515316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150516025_150516604_150516903_150517256
ES.27894.1	chr5	-	3448	1	ISM	ENSMUSG00000107096.4	ENSMUST00000201992.2	4620	2	3622	2	3502	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTGAAAAGTGTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	150526846	150523398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_150523400_150526800
ES.27895.1	chr5	+	173	1	Intergenic	novelGene_23193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	150538577	150538750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150538600_150538800
ES.27896.1	chr5	-	178	1	Intergenic	novelGene_23194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGGTAG	NA	False	NA	NA	False	NA	NA	NA	150555454	150555276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150555300_150555500
ES.27897.1	chr5	+	6360	1	Antisense	novelGene_ENSMUSG00000029655.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAACAAATG	NA	False	NA	NA	False	NA	NA	NA	150557781	150564141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_150557800_150564100
ES.27898.1	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000029655.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAATTAT	5593	False	NA	NA	False	NA	NA	NA	150572118	150572294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_+_150572100_150572300
ES.27899.1	chr5	+	178	1	Intergenic	novelGene_23195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACC	7983	False	NA	NA	False	NA	NA	NA	150574508	150574686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150574500_150574700
ES.279.1	chr1	-	1130	1	Antisense	novelGene_ENSMUSG00000037408.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACAACCCAACAGCC	9632	False	NA	NA	False	NA	NA	NA	36547044	36545914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_36545900_36547000
ES.2790.1	chr10	+	155	1	Intergenic	novelGene_2130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	56071057	56071212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_56071100_56071200
ES.27900.1	chr5	+	159	1	Intergenic	novelGene_23197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGCTCCAATGA	9714	False	NA	NA	False	NA	NA	NA	150576239	150576398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150576200_150576400
ES.27901.1	chr5	+	3016	1	Intergenic	novelGene_23198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTAAATAGCTTA	NA	False	NA	NA	False	NA	NA	NA	150580017	150583033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150580000_150583000
ES.27902.1	chr5	-	8957	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	1	-11	-1	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTTTGTTTCTTAAT	5461	False	NA	NA	False	AATAAA	-14	NA	150589053	150559437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.10	chr5	-	4634	7	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-17	781	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.4375886814694	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGTACTTGAAGCTTG	5455	False	NA	NA	False	AATAAA	-29	NA	150589059	150563419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150564250_150564596_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.11	chr5	-	5165	6	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-85	778	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	100.608945924306	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTAAGTACTTGAAGC	5618	False	NA	NA	False	AATAAA	-26	NA	150588896	150563422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588615
ES.27902.12	chr5	-	3375	5	ISM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	4177	4417	52	347	3prime_fragment	FALSE	canonical	3	244	junction_2	15.8902485820707	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATGCAATGAAAATAACT	9614	False	NA	NA	False	AATAAA	-16	NA	150584900	150563853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743
ES.27902.13	chr5	-	3355	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	32	5595	-3	-831	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTCGTTGTAGGTA	5469	False	NA	NA	False	AGTAAA	-15	NA	150589045	150565031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.14	chr5	-	1043	2	NNC	ENSMUSG00000029655.18	novel	650	3	NA	NA	4207	-832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTGTCGTTGTAGGT	NA	False	NA	NA	False	AGTAAA	-14	NA	150566777	150565032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150565952_150566653
ES.27902.15	chr5	-	3562	6	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-96	-836	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	100.608945924306	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATATCTGTGTGTCGTTGT	5607	False	NA	NA	False	AGTAAA	-10	NA	150588907	150565036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588615
ES.27902.16	chr5	-	3204	7	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-2	-1081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.171972863772	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCTCTGTGTGTTATTT	5435	False	NA	NA	False	NA	NA	NA	150589079	150565281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150573586_150573652_150574079_150574205_150584743_150585979_150588965
ES.27902.17	chr5	-	3122	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	13	5847	13	-1083	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATCTCTGTGTGTTAT	5450	False	NA	NA	False	NA	NA	NA	150589064	150565283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.18	chr5	-	2142	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	24	6816	-11	212	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGAGCATTTTTGATT	5461	False	NA	NA	False	AATACA	-42	NA	150589053	150566252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.19	chr5	-	2252	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	-245	6975	-245	53	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTTATAATCTTTT	5192	False	NA	-12	True	AATAAA	-22	NA	150589322	150566411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.2	chr5	-	8785	4	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-11	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	111.881882159515	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTTTGCTTTTGTTT	5461	False	NA	NA	False	AATAAA	-8	NA	150589053	150559443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150574079_150574205_150584743_150585979_150588965
ES.27902.20	chr5	-	5424	4	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-4	53	intron_retention	FALSE	canonical	3	228	junction_3	11.0855260988773	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTTATAATCTTTT	5468	False	NA	-12	True	AATAAA	-22	NA	150589046	150566411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150574205_150584743_150585979_150588965
ES.27902.21	chr5	-	5047	5	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	13	53	intron_retention	FALSE	canonical	0	0	junction_2	105.946625713139	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTTATAATCTTTT	5450	False	NA	-12	True	AATAAA	-22	NA	150589064	150566411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570937_150574205_150584743_150585979_150588965
ES.27902.22	chr5	-	2259	6	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-212	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.8774744259373	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATGTTTTTATAAT	5225	False	NA	-17	True	AATAAA	-17	NA	150589289	150566416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574034_150574205_150584743_150585979_150588965
ES.27902.23	chr5	-	5050	5	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-17	48	intron_retention	FALSE	canonical	3	228	junction_4	9.60143218483576	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATGTTTTTATAAT	5455	False	NA	-17	True	AATAAA	-17	NA	150589059	150566416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150570543_150570924_150574205_150584743_150585979_150588965
ES.27902.24	chr5	-	2171	6	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-85	48	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	100.608945924306	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATGTTTTTATAAT	5618	False	NA	-17	True	AATAAA	-17	NA	150588896	150566416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588615
ES.27902.25	chr5	-	2229	6	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-54	48	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	103.777839638335	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATGTTTTTATAAT	5649	False	NA	-17	True	AATAAA	-17	NA	150588865	150566416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588526
ES.27902.26	chr5	-	1874	5	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	2	47	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	104.425511729653	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAATGTTTTTATAA	5439	False	NA	-18	True	AATAAA	-16	NA	150589075	150566417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150570465_150570543_150570924_150571014_150584743_150585979_150588965
ES.27902.27	chr5	-	1856	6	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	96.6821596779882	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGTGTTTCCTACAA	5469	False	NA	-5	True	AATAAA	-16	NA	150589045	150566480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574129_150574205_150584743_150585979_150588965
ES.27902.28	chr5	-	961	1	FSM	ENSMUSG00000029655.18	ENSMUST00000201384.2	7526	1	4285	2280	3543	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGGTGTTTCCTACAA	NA	False	NA	-5	True	AATAAA	-16	NA	150567441	150566480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566500_150567400
ES.27902.29	chr5	-	6352	1	Intergenic	novelGene_23196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACTCCCATTTCTCCCA	1294	False	NA	NA	False	NA	NA	NA	150582503	150576151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150576200_150582500
ES.27902.3	chr5	-	7591	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	21	1370	-14	-1370	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTGTAGTCTCAG	5458	False	NA	NA	False	ATTAAA	-21	NA	150589056	150560806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.30	chr5	-	2136	2	ISM	ENSMUSG00000029655.18	ENSMUST00000144378.2	3842	3	-22	12267	13	1940	5prime_fragment	FALSE	canonical	3	228	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATCAGATCTCCTGGAA	5450	False	NA	NA	False	NA	NA	NA	150589064	150583941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_150585979_150588965
ES.27902.31	chr5	-	3460	1	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	1410	1940	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATCAGATCTCCTGGAA	7113	False	NA	NA	False	NA	NA	NA	150587401	150583941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150583900_150587400
ES.27902.4	chr5	-	5956	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	21	3005	-14	1759	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTGATTCAAATTGTC	5458	False	NA	NA	False	TATAAA	-23	NA	150589056	150562441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.5	chr5	-	5258	7	NNC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-14	1757	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.4375886814694	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAGTTGATTCAAATTG	5458	False	NA	NA	False	TATAAA	-21	NA	150589056	150562443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150584953_150585648_150585979_150588965
ES.27902.6	chr5	-	5770	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	46	3166	11	1598	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATACATGCCAGATT	5483	False	NA	NA	False	ATTAAA	-11	NA	150589031	150562602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.7	chr5	-	5067	4	NIC	ENSMUSG00000029655.18	novel	8982	6	NA	NA	-3	1047	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	111.881882159515	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTGTCCTGAACAGAT	5469	False	NA	NA	False	AATACA	-19	NA	150589045	150563153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_150566781_150574079_150574205_150584743_150585979_150588965
ES.27902.8	chr5	-	5265	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	-1	3718	-1	1046	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAGTGTCCTGAACAGA	5436	False	NA	NA	False	AATACA	-18	NA	150589078	150563154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27902.9	chr5	-	5065	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	21	3896	-14	868	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAAATTTATACTG	5458	False	NA	NA	False	GATAAA	-13	NA	150589056	150563332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ES.27903.1	chr5	-	300	1	Intergenic	novelGene_23199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAGAAAAAAAAAGACC	4525	False	NA	NA	False	AATAGA	-6	NA	150589989	150589689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150589700_150590000
ES.27903.2	chr5	-	175	1	Intergenic	novelGene_23200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACATT	4524	False	NA	NA	False	NA	NA	NA	150589990	150589815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150589800_150590000
ES.27904.1	chr5	+	6918	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	49	450	-39	-240	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGTCGTACTCATTT	NA	False	NA	38	True	AATAAA	-45	NA	150597252	150733705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.10	chr5	+	4499	31	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	105	12443	17	-2	5prime_fragment	FALSE	canonical	2	105	junction_29	21.7852141498668	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTTTCCCCTTTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	150597308	150720887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035
ES.27904.101	chr5	+	6000	26	ISM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	70423	223	-3660	-13	3prime_fragment	FALSE	canonical	2	103	junction_22	26.2826482683918	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACAGCTTGCAAGTTTG	2324	False	NA	9	True	ATTAAA	-23	NA	150667626	150733932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.102	chr5	+	4181	26	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	-3631	-1180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	40.9920187353587	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATAGTCTAGAATGTTA	2353	False	NA	NA	False	AATAAA	-22	NA	150667655	150732150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729046_150729178_150731277
ES.27904.103	chr5	+	5661	25	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	72864	-351	-1219	-264	3prime_fragment	FALSE	canonical	2	95	junction_21	26.6738271636366	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTACAGTTGTTAGC	4765	False	NA	14	True	AATAAA	-21	NA	150670067	150733681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.104	chr5	+	5058	24	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	74396	64	313	-64	3prime_fragment	FALSE	canonical	2	95	junction_20	26.8259107879495	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGTCATCAACTAAA	6297	False	NA	NA	False	AATAAA	-12	NA	150671599	150733266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.105	chr5	+	172	1	Genic_Genomic	ENSMUSG00000034021.16	novel	NA	NA	NA	NA	666	46	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATTTTTAA	6650	False	NA	NA	False	NA	NA	NA	150671952	150672124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr5_+_150672000_150672100
ES.27904.106	chr5	+	5224	19	ISM	ENSMUSG00000034021.16	ENSMUST00000038900.15	7315	35	87191	206	1654	-19	3prime_fragment	FALSE	canonical	2	6	junction_16	44.5287048492942	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCTTACAGCTTGCA	174	False	NA	3	True	ATTAAA	-17	NA	150684482	150733926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ES.27904.107	chr5	+	4079	18	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	91179	412	5554	-412	3prime_fragment	FALSE	canonical	2	95	junction_14	29.1633034805077	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGACTATTTTAGA	4074	False	NA	NA	False	AATAAA	-13	NA	150688382	150732918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.108	chr5	+	3698	7	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	-14358	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.1112260852584	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATATTTTTATGTGAC	NA	False	NA	-14	True	AATAAA	-15	NA	150702683	150734131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150702745_150704073_150704129_150720100_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.109	chr5	+	3688	12	NIC	ENSMUSG00000034021.16	novel	7315	35	NA	NA	-10562	-65	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	52.9343894531415	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTGTCATCAACTAA	NA	False	NA	NA	False	AATAAA	-11	NA	150706479	150733265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ES.27904.11	chr5	+	7334	35	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	17	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.5740113263266	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTGATTTTTAATTT	NA	False	NA	33	True	AATATA	-20	NA	150597308	150734178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643488_150645756_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.111	chr5	+	3646	7	ISM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	119808	230	-30	-20	3prime_fragment	FALSE	canonical	2	103	junction_3	38.8304719975892	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTTCTTACAGCTTGC	NA	False	NA	2	True	ATTAAA	-16	NA	150717011	150733925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.112	chr5	+	2036	4	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	126361	1182	-5129	-1182	3prime_fragment	FALSE	canonical	3	166	junction_1	12.2565175405668	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATAGTCTAGAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	150723564	150732148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.113	chr5	+	3980	2	FSM	ENSMUSG00000034021.16	ENSMUST00000132947.2	3152	2	-602	-226	-602	16	multi-exon	FALSE	canonical	3	196	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCATGTTTTGTGATTT	NA	False	NA	26	True	AATATA	-13	NA	150728091	150734171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150729178_150731277
ES.27904.114	chr5	+	2826	2	FSM	ENSMUSG00000034021.16	ENSMUST00000132947.2	3152	2	313	13	313	-13	multi-exon	FALSE	canonical	3	196	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACAGCTTGCAAGTTTG	NA	False	NA	9	True	ATTAAA	-23	NA	150729006	150733932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150729178_150731277
ES.27904.12	chr5	+	4566	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	105	1927	17	-1927	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGCCAAAGCGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	150597308	150731403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.14	chr5	+	6863	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	107	-372	19	-243	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTGGTCGTACTCA	NA	False	NA	35	True	AATAAA	-42	NA	150597310	150733702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.15	chr5	+	7031	34	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	20	-11	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	31.2727566361149	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGCTTGCAAGTTTGAC	NA	False	NA	11	True	ATTAAA	-25	NA	150597311	150733934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.16	chr5	+	5509	35	FSM	ENSMUSG00000034021.16	ENSMUST00000038900.15	7315	35	20	1786	20	-984	multi-exon	FALSE	canonical	2	6	junction_32	36.1914961622709	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGTGTTTTGTATTTTA	NA	False	NA	NA	False	TATAAA	-14	NA	150597311	150732346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ES.27904.17	chr5	+	7270	34	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	21	19	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	31.2727566361149	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTTGTGATTTTTA	NA	False	NA	29	True	AATATA	-16	NA	150597312	150734174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.18	chr5	+	5438	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	22	-981	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTGTATTTTATAG	NA	False	NA	NA	False	TATAAA	-17	NA	150597313	150732349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.19	chr5	+	7018	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	22	-16	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTACAGCTTGCAAGT	NA	False	NA	6	True	ATTAAA	-20	NA	150597313	150733929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.2	chr5	+	6254	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	49	295	-39	-295	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTTGAATTGTGTCTT	NA	False	NA	NA	False	TTTAAA	-1	NA	150597252	150733035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.20	chr5	+	7333	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	113	-848	25	23	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTGATTTTTAATTT	NA	False	NA	33	True	AATATA	-20	NA	150597316	150734178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.21	chr5	+	5445	37	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	26	-1181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.2225234987525	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGTCTAGAATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150597317	150732149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150617894_150617969_150618086_150618155_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.25	chr5	+	7343	35	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	48.364568517555	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATATTTTTATGTGACT	NA	False	NA	-13	True	AATAAA	-16	NA	150597321	150734132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150730890_150731021_150731277
ES.27904.26	chr5	+	5300	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	119	1179	31	-1179	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGTCTAGAATGTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	150597322	150732151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.27	chr5	+	5234	34	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	31	-1182	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	31.2727566361149	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATAGTCTAGAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	150597322	150732148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.28	chr5	+	4552	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	119	2746	31	-1921	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAAGCGTGGACAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	150597322	150731409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.3	chr5	+	7148	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	51	218	-37	-8	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGCAAGTTTGACTTT	NA	False	NA	14	True	ATTAAA	-28	NA	150597254	150733937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.30	chr5	+	7218	35	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	36	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	36.3550946440027	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGTGACTCAATA	NA	False	NA	-8	True	AATAAA	-21	NA	150597327	150734137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671623_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.32	chr5	+	4695	19	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	39	-63	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	52.4216346347362	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTCATCAACTAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	150597330	150733267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.34	chr5	+	4309	33	ISM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	127	9425	39	1552	5prime_fragment	FALSE	canonical	2	103	junction_31	23.6750255741678	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACTTTATAAGTTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	150597330	150724730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586
ES.27904.35	chr5	+	5278	35	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	40	-1189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.7347642781929	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGCTTTTAATAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	150597331	150732141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670221_150671567_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.36	chr5	+	6749	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	40	-267	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATTGCTACAGTTGTT	NA	False	NA	11	True	AATAAA	-18	NA	150597331	150733678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.40	chr5	+	5217	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	43	-1181	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGTCTAGAATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150597334	150732149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.41	chr5	+	6476	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	131	810	43	15	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGGAGGATTTTTATT	NA	False	NA	NA	False	TATAAA	-11	NA	150597334	150733345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.42	chr5	+	3749	30	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	131	15324	43	-2883	5prime_fragment	FALSE	canonical	3	105	junction_29	19.2889043533683	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGCTTTCCATATACA	NA	False	NA	NA	False	AATAAA	-28	NA	150597334	150718006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732
ES.27904.45	chr5	+	6408	34	NIC	ENSMUSG00000034021.16	novel	7315	35	NA	NA	44	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_31	41.2199858805935	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAAAATATTATG	NA	False	NA	NA	False	AATATA	-19	NA	150597335	150733332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ES.27904.46	chr5	+	1988	16	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	132	50908	44	10344	5prime_fragment	FALSE	canonical	3	153	junction_8	14.4554487996741	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAAGAGTTGCCAAGAA	NA	False	NA	NA	False	AATAAA	-30	NA	150597335	150682422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136
ES.27904.47	chr5	+	7662	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	132	-1196	44	371	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCTATAATGTATATAG	NA	False	NA	NA	False	ATTAAA	-17	NA	150597335	150734526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.48	chr5	+	4192	28	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	132	16398	44	-3957	5prime_fragment	FALSE	canonical	3	143	junction_26	14.8011047672787	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCGTGTACTCGGTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	150597335	150716932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031
ES.27904.52	chr5	+	7065	35	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	46	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.963509547421	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTACAGCTTGCAAGT	NA	False	NA	6	True	ATTAAA	-20	NA	150597337	150733929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639865_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.53	chr5	+	5729	26	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	46	-268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.4703545820889	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAATTGCTACAGTTGT	NA	False	NA	10	True	AATAAA	-17	NA	150597337	150733677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.55	chr5	+	5174	35	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	46	-1188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.4699833915689	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCTTTTAATAGTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	150597337	150732142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643389_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.57	chr5	+	4583	1	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	46	-70158	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTAACCTGCTGCTAAC	NA	False	NA	NA	False	NA	NA	NA	150597337	150601920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597300_150601900
ES.27904.58	chr5	+	7195	34	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	40.5804532553488	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATATTTTTATGTGAC	NA	False	NA	-14	True	AATAAA	-15	NA	150597337	150734131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717876_150720033_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.59	chr5	+	4877	1	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	46	-69864	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAATAAAAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	150597337	150602214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597300_150602200
ES.27904.60	chr5	+	5479	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	134	1804	46	-979	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTATTTTATAGTG	NA	False	NA	NA	False	TATAAA	-19	NA	150597337	150732351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.61	chr5	+	4315	33	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	134	8593	46	1559	5prime_fragment	FALSE	canonical	2	95	junction_31	24.3385745461294	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAAGTTTATAAGTGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	150597337	150724737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586
ES.27904.62	chr5	+	4404	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	46	-1927	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.6266498388888	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGCCAAAGCGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	150597337	150731403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.63	chr5	+	1726	8	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	47	-18085	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	59.2597189135612	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACTCTCCTGTTACA	NA	False	NA	NA	False	AATAAA	-8	NA	150597338	150653993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150653071
ES.27904.64	chr5	+	6801	35	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	47	-268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.5740113263266	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAATTGCTACAGTTGT	NA	False	NA	10	True	AATAAA	-17	NA	150597338	150733677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639867_150639995_150643287_150643485_150645755_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.66	chr5	+	6553	29	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	47	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.0194182568724	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATATTTTTATGTGACT	NA	False	NA	-13	True	AATAAA	-16	NA	150597338	150734132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.69	chr5	+	6179	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	137	1101	49	-276	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCTTCAGTGTTTAACT	NA	False	NA	NA	False	TTTAAA	-20	NA	150597340	150733054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.7	chr5	+	5310	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	101	2006	13	-1181	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGTCTAGAATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	150597304	150732149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.70	chr5	+	7043	35	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	49	-19	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	36.0653482245847	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCTTACAGCTTGCA	NA	False	NA	3	True	ATTAAA	-17	NA	150597340	150733926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639875_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.72	chr5	+	5270	35	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	50	-1182	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	36.4588690848756	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATAGTCTAGAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	150597341	150732148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639875_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.73	chr5	+	6064	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	138	1215	50	-390	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCATGCTATTTTCTA	NA	False	NA	NA	False	AATAAA	-35	NA	150597341	150732940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.76	chr5	+	5630	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	140	828	52	-828	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAAAAAAAAAATTGTT	NA	False	NA	NA	False	NA	NA	NA	150597343	150732502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.78	chr5	+	6848	34	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	55	-18	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	37.0129156223205	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCTTACAGCTTGCAA	NA	False	NA	4	True	ATTAAA	-18	NA	150597346	150733927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.8	chr5	+	6532	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	104	-38	16	38	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCATAGTTCACCAGAT	NA	False	NA	NA	False	TATAAA	-34	NA	150597307	150733368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.81	chr5	+	4919	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	148	1531	60	-1531	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTCTTCCTGCCCC	NA	False	NA	NA	False	NA	NA	NA	150597351	150731799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.84	chr5	+	4457	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	61	-1923	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCCAAAGCGTGGACAG	NA	False	NA	NA	False	AATAAA	-21	NA	150597352	150731407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.86	chr5	+	4278	33	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	63	1554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	44.8634103244225	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTTATAAGTTTATAA	NA	False	NA	NA	False	ATTAAA	-17	NA	150597354	150724732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150639875_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717876_150720033_150720136_150724042_150724483_150724586
ES.27904.87	chr5	+	5331	36	NNC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	64	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7994715712275	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTAATAGTCTAGAATG	NA	False	NA	NA	False	AATAAA	-19	NA	150597355	150732147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150617894_150617969_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.89	chr5	+	4779	6	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	69	-15738	intron_retention	FALSE	canonical	3	159	junction_1	13.3716117203574	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCATTCTCTGGATTGT	NA	False	NA	NA	False	NA	NA	NA	150597360	150656340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150646041_150646709_150646837_150652358
ES.27904.90	chr5	+	5325	36	NNC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	71	-1188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0841390273424	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCTTTTAATAGTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	150597362	150732142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150597419_150617894_150617969_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.92	chr5	+	4359	30	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	84	-12	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.0928408850461	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTGGAATCTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	150597375	150720877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035
ES.27904.94	chr5	+	617	1	Intergenic	novelGene_23201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150608468	150609085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150608500_150609100
ES.27904.95	chr5	+	187	1	Intergenic	novelGene_23202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCTTTTAACA	NA	False	NA	NA	False	NA	NA	NA	150613532	150613719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150613500_150613700
ES.27904.96	chr5	+	4126	32	ISM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	48555	2746	-25528	-1921	3prime_fragment	FALSE	canonical	2	103	junction_28	24.3133806507457	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAAGCGTGGACAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	150645758	150731409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.97	chr5	+	6704	30	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	-25346	-2	combination_of_known_splicesites	FALSE	canonical	2	37	junction_24	32.8322222168345	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTATATTTTTATGTGA	NA	False	NA	-15	True	AATAAA	-14	NA	150645940	150734130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27904.98	chr5	+	6461	29	NIC	ENSMUSG00000034021.16	novel	7315	35	NA	NA	-19056	-19	combination_of_known_junctions	FALSE	canonical	2	6	junction_26	38.2989549332562	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCTTACAGCTTGCA	NA	False	NA	3	True	ATTAAA	-17	NA	150652230	150733926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ES.27904.99	chr5	+	6088	29	ISM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	55153	-346	-18930	-269	3prime_fragment	FALSE	canonical	2	95	junction_25	25.7550024861428	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATTGCTACAGTTG	NA	False	NA	9	True	AATAAA	-16	NA	150652356	150733676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_+_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ES.27905.1	chr5	-	188	1	Intergenic	novelGene_23203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	150638541	150638353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150638400_150638500
ES.27906.1	chr5	-	4898	3	Antisense	novelGene_ENSMUSG00000107048.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGACATACCCTAATG	NA	False	NA	NA	False	NA	NA	NA	150682919	150673868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_150677935_150679846_150679896_150682136
ES.27906.3	chr5	-	6330	1	Antisense	novelGene_ENSMUSG00000034021.16_AS_novelGene_ENSMUSG00000107048.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCATTGACTAAGGTT	NA	False	NA	NA	False	TATAAA	-39	NA	150682739	150676409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_150676400_150682700
ES.27906.5	chr5	-	7258	9	Antisense	novelGene_ENSMUSG00000107048.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCATTGACTAAGGTT	NA	False	NA	NA	False	TATAAA	-39	NA	150706245	150676409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr5_-_150677935_150679846_150679896_150682136_150682276_150684482_150684598_150688363_150688466_150693242_150693413_150698859_150701776_150702674_150702745_150704073
ES.27907.1	chr5	-	224	1	Intergenic	novelGene_23204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150719063	150718839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150718800_150719100
ES.27908.1	chr5	+	1210	1	Intergenic	novelGene_23205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTTATGGGATGAAGA	NA	False	NA	NA	False	NA	NA	NA	150747104	150748314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150747100_150748300
ES.27909.1	chr5	-	210	1	Intergenic	novelGene_23206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATAAGGTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	150780513	150780303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_150780300_150780500
ES.2791.1	chr10	+	1675	1	Antisense	novelGene_ENSMUSG00000038122.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATTCCAAAGGCATATG	5902	False	NA	NA	False	NA	NA	NA	56089761	56091436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_56089800_56091400
ES.27910.1	chr5	+	4368	6	NNC	ENSMUSG00000058488.8	novel	5118	5	NA	NA	-81485	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCTGAATCATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	150794586	150917282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_+_150794665_150798972_150799080_150904074_150904586_150905967_150906237_150911857_150912960_150914981
ES.27910.2	chr5	+	273	1	Intergenic	novelGene_23207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAAACATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	150871011	150871284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_+_150871000_150871300
ES.27911.1	chr5	-	1620	4	ISM	ENSMUSG00000016128.15	ENSMUST00000141117.8	442	5	255	-1338	255	1187	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGCTGTAAGCTGGATTC	NA	False	NA	NA	False	TATAAA	-20	NA	151018957	150985719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr5_-_150987122_150996765_150996830_151016211_151016294_151018885
ES.27912.1	chr5	-	161	1	Intergenic	novelGene_23208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	151262388	151262227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_-_151262200_151262400
ES.27913.1	chr5	+	1943	2	FSM	ENSMUSG00000097321.6	ENSMUST00000181555.4	1977	2	34	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151292173	151305648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_+_151292322_151303853
ES.27913.2	chr5	+	4447	1	NIC	ENSMUSG00000097321.6	novel	2034	4	NA	NA	11784	2765	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAGAGACTGCAGAGAT	NA	False	NA	NA	False	NA	NA	NA	151303966	151308413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_+_151304000_151308400
ES.27914.1	chr5	-	1228	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	28	61	-6	2	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTTGTGTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	151574679	151566281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ES.27914.2	chr5	-	1205	9	NNC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	111.829599726548	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTGTGTTTGTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	151574672	151566282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569150_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ES.27914.3	chr5	-	3329	5	NIC	ENSMUSG00000033970.16	novel	2726	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	322	junction_1	16.1477552619551	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATCATTTGTGTTTG	NA	False	NA	-8	True	AATAAA	-15	NA	151574679	151566288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ES.27914.4	chr5	-	4420	1	NIC	ENSMUSG00000033970.16	novel	1317	9	NA	NA	-2484	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAATGTATCATTTGTGT	NA	False	NA	-11	True	AATAAA	-12	NA	151570711	151566291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr5_-_151566300_151570700
ES.27915.1	chr5_GL456354v1_random	+	1897	4	Intergenic	novelGene_23209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTTTGAGCAAATGTC	NA	False	NA	NA	False	AATAAA	-13	NA	157304	161687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_GL456354v1_random_+_157381_158515_158830_159283_159875_160771
ES.27916.1	chr5_JH584299v1_random	+	1119	2	Intergenic	novelGene_23210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCCTAGTCTCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	785780	809719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_JH584299v1_random_+_785894_808713
ES.27916.2	chr5_JH584299v1_random	+	4008	4	Intergenic	novelGene_23211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCCTAGTCTCTTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	795875	809720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr5_JH584299v1_random_+_797972_806182_806497_807158_807750_808713
ES.27917.1	chr6	-	1882	1	Intergenic	novelGene_23212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	3137385	3135503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_3135500_3137400
ES.27918.1	chr6	+	806	1	Intergenic	novelGene_23213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3145568	3146374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3145600_3146400
ES.27919.1	chr6	+	3424	1	Intergenic	novelGene_23214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3151976	3155400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3152000_3155400
ES.2792.1	chr10	-	7239	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	3	-2	3	2	multi-exon	FALSE	non_canonical	1	5	junction_4	4.26639759486853	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGTGAGAACATTATTA	NA	False	NA	NA	False	AATAAA	-18	NA	56104782	55890386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.12	chr10	-	4237	34	NNC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	-212	-3129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	4.90066617161584	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGGAACGAAGTGAG	NA	False	NA	NA	False	AATATA	-20	NA	56104997	55893517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573_56104795_56104880
ES.2792.13	chr10	-	4020	32	NIC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	5	-3131	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	5.0080060772654	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTGTGGAACGAAGTG	NA	False	NA	NA	False	AATATA	-18	NA	56104780	55893519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.14	chr10	-	3999	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	5	3236	5	-3236	multi-exon	FALSE	non_canonical	1	5	junction_4	4.26639759486853	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGGTGTTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	56104780	55893624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.15	chr10	-	4205	33	NNC	ENSMUSG00000038122.10	novel	4192	30	NA	NA	-275	-16673	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.4913817421028	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTATTTTGACTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	56105060	55907061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55907168_55913652_55913838_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.16	chr10	-	4189	30	FSM	ENSMUSG00000038122.10	ENSMUST00000219385.2	4192	30	3	0	3	0	multi-exon	FALSE	non_canonical	1	5	junction_1	4.33496417374282	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCTTGATCTGTT	NA	False	NA	NA	False	NA	NA	NA	56104782	55924264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.17	chr10	-	4270	31	NNC	ENSMUSG00000038122.10	novel	4192	30	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6.17890677133819	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCTTGATCTGTT	NA	False	NA	NA	False	NA	NA	NA	56104782	55924264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026469_56026629_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056639_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.18	chr10	-	2641	18	NNC	ENSMUSG00000038122.10	novel	4192	30	NA	NA	6	-1074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4.80268091222358	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTTATTAGTTTGTTGT	NA	False	NA	NA	False	AATAAA	-44	NA	56104779	56031332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071593_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.19	chr10	-	1408	2	ISM	ENSMUSG00000038122.10	ENSMUST00000219385.2	4192	30	1	175360	1	-69366	5prime_fragment	FALSE	canonical	3	19	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCTCTGGCAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	56104784	56099624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_56100822_56104573
ES.2792.2	chr10	-	7209	33	NNC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	27	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	4.9749371855331	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGTGAGAACATTATTA	NA	False	NA	NA	False	AATAAA	-18	NA	56104758	55890386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940648_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.3	chr10	-	7149	33	NNC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	4.9749371855331	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTGTGAGAACATTATT	NA	False	NA	NA	False	AATAAA	-17	NA	56104771	55890387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056639_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.5	chr10	-	7214	33	NNC	ENSMUSG00000038122.10	novel	7240	33	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	5.89018980487896	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATCTTGTGAGAACAT	NA	False	NA	NA	False	AATAAA	-13	NA	56104782	55890391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56067594_56067714_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.7	chr10	-	5381	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	3	1856	3	-1856	multi-exon	FALSE	non_canonical	1	5	junction_4	4.26639759486853	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGTGGTAATATTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	56104782	55892244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.2792.8	chr10	-	3444	3	ISM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	186845	1863	115079	-1863	3prime_fragment	FALSE	canonical	3	9	junction_1	3	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATTTCTATTGTGGTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	55917940	55892251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_55893801_55903994_55904184_55916234
ES.2792.9	chr10	-	4751	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	36	2453	36	-2453	multi-exon	FALSE	non_canonical	1	5	junction_4	4.26639759486853	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCAGTGGATATTTCT	NA	False	NA	NA	False	NA	NA	NA	56104749	55892841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ES.27920.1	chr6	-	6388	1	Intergenic	novelGene_23215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	3170275	3163887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_3163900_3170300
ES.27921.1	chr6	+	1263	3	Intergenic	novelGene_23216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTTAGGGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	3183225	3198511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3183311_3196954_3197164_3197542
ES.27921.2	chr6	+	1087	3	Intergenic	novelGene_23217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTATGAATTTTGATA	NA	False	NA	NA	False	AATAGA	-15	NA	3183227	3198317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3183310_3196933_3197164_3197542
ES.27922.1	chr6	+	98	1	Intergenic	novelGene_23218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAATAACAATACAGGAC	14	False	NA	NA	False	NA	NA	NA	3200867	3200965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3200900_3201000
ES.27923.1	chr6	+	6773	1	FSM	ENSMUSG00000107601.2	ENSMUST00000203560.2	838	1	-5851	-84	-5851	84	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCCACTTGTTAAT	398	False	NA	NA	False	AATACA	-13	NA	3202017	3208790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3202000_3208800
ES.27924.1	chr6	+	1836	1	Intergenic	novelGene_23219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGTATTGTTTACT	NA	False	NA	NA	False	TATAAA	-8	NA	3329223	3331059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3329200_3331100
ES.27925.1	chr6	-	5318	2	FSM	ENSMUSG00000047735.15	ENSMUST00000120087.6	5330	2	12	0	12	0	multi-exon	FALSE	canonical	3	6	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTCTAAATTATTTC	-1	True	NA	NA	False	AATAAA	-20	NA	3399560	3372256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_3377282_3399267
ES.27925.2	chr6	-	5492	3	NNC	ENSMUSG00000047735.15	novel	5330	2	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTCTAAATTATTTC	1	True	NA	NA	False	AATAAA	-20	NA	3399456	3372256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_3377282_3384132_3384407_3399263
ES.27925.3	chr6	-	4165	3	Intergenic	novelGene_23220	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCTCTTCAAGATTATT	6516	False	NA	NA	False	TATAAA	-4	NA	3393043	3386811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_3387297_3387522_3389855_3391695
ES.27926.1	chr6	-	447	2	Intergenic	novelGene_23221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGGTTTGTTGCAT	NA	False	NA	NA	False	NA	NA	NA	3425140	3404760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_3405053_3424985
ES.27927.1	chr6	+	160	1	Intergenic	novelGene_23222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3456257	3456417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_3456300_3456400
ES.27928.1	chr6	+	3581	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	-8	215	-8	1	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTGAGACTACTAC	NA	False	NA	23	True	AATAAA	-20	NA	3498373	3603316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.10	chr6	+	4194	3	ISM	ENSMUSG00000001376.18	ENSMUST00000184780.8	1587	6	-18	747	4	-747	intron_retention	FALSE	canonical	3	151	junction_1	14	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAGGAAAGGAAAA	-12	True	NA	NA	False	NA	NA	NA	3498407	3520598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_3498556_3504868_3504938_3516621
ES.27928.13	chr6	+	4592	26	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_24	45.6819614289929	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCAGGTGTGTGAGACT	-5	True	NA	18	True	AATAAA	-15	NA	3498414	3603311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592484_3594017_3594115_3594742_3594902_3600127_3600318_3602659
ES.27928.14	chr6	+	1831	5	ISM	ENSMUSG00000001376.18	ENSMUST00000184780.8	1587	6	-2	694	2	-694	intron_retention	FALSE	canonical	3	151	junction_1	11.2333209693305	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	4	True	NA	NA	False	NA	NA	NA	3498423	3520651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216
ES.27928.16	chr6	+	3477	27	NIC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	-7	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	36.023250217228	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	7	True	NA	15	True	AATAAA	-12	NA	3498426	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.18	chr6	+	3764	28	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	44.9904730046229	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATAAAATATTTTAC	7	True	NA	NA	False	NA	NA	NA	3498426	3603507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551107_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567897_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.19	chr6	+	892	6	FSM	ENSMUSG00000001376.18	ENSMUST00000184780.8	1587	6	1	694	1	-694	multi-exon	FALSE	canonical	3	151	junction_1	10.4575331699211	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	7	True	NA	NA	False	NA	NA	NA	3498426	3520651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206
ES.27928.20	chr6	+	3925	29	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	51.3137607354628	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTGTGTGAGACTA	7	True	NA	19	True	AATAAA	-16	NA	3498426	3603312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522852_3524092_3524176_3527403_3527672_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.21	chr6	+	3618	27	NIC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	35.2982432470989	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGCTGTCTTTGAATT	7	True	NA	NA	False	TATAAA	-19	NA	3498426	3603528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3600127_3600318_3602659
ES.27928.22	chr6	+	2456	23	NNC	ENSMUSG00000001376.18	novel	3687	27	NA	NA	1	-4360	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	36.8407338339166	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTTTGCTCTAAAGT	7	True	NA	NA	False	AATAAA	-11	NA	3498426	3588697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3588395
ES.27928.24	chr6	+	3136	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	45	607	1	-391	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTGTTCTCAAGTGA	7	True	NA	NA	False	AATAGA	-14	NA	3498426	3602924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.25	chr6	+	4819	28	FSM	ENSMUSG00000001376.18	ENSMUST00000164052.5	4824	28	5	0	1	0	multi-exon	FALSE	canonical	1	1	junction_27	34.4878261259192	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	7	True	NA	22	True	AATAAA	-19	NA	3498426	3603315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3601367
ES.27928.26	chr6	+	4795	27	NIC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	1	-3	intron_retention	FALSE	canonical	2	105	junction_24	20.7395799744063	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTGTGTGAGACTA	7	True	NA	19	True	AATAAA	-16	NA	3498426	3603312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.27	chr6	+	3418	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	48	322	4	-106	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATATGTTCTCTGTTTTT	10	True	NA	-84	True	AGTAAA	-13	NA	3498429	3603209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.28	chr6	+	2302	15	NNC	ENSMUSG00000001376.18	novel	5361	12	NA	NA	-6068	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.9782529745541	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	NA	False	NA	15	True	AATAAA	-12	NA	3552908	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3552954_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.29	chr6	+	3929	14	ISM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	54942	223	-5653	-7	3prime_fragment	FALSE	canonical	2	105	junction_11	22.295221978642	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	NA	False	NA	15	True	AATAAA	-12	NA	3553323	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.3	chr6	+	9229	26	NIC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	-7	-110	intron_retention	FALSE	canonical	2	105	junction_23	22.1151170017253	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCAATATGTTCTCTGT	NA	False	NA	-88	True	AGTAAA	-9	NA	3498396	3603205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.30	chr6	+	2619	7	NNC	ENSMUSG00000001376.18	novel	1786	10	NA	NA	-1210	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.0969272011104	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	NA	False	NA	15	True	AATAAA	-12	NA	3586840	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3588087_3592426_3592583_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.31	chr6	+	7986	5	NIC	ENSMUSG00000001376.18	novel	1786	10	NA	NA	-795	0	intron_retention	FALSE	canonical	2	105	junction_2	31.693847983481	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	NA	False	NA	22	True	AATAAA	-19	NA	3587255	3603315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.4	chr6	+	4991	27	NIC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	-7	-8	intron_retention	FALSE	canonical	2	105	junction_24	21.6990237830206	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTACCAGGTGTGTGA	NA	False	NA	14	True	AATAAA	-11	NA	3498396	3603307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.5	chr6	+	3772	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	15	1	-7	-1	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGTCTTTGAATTCA	NA	False	NA	NA	False	TATAAA	-21	NA	3498396	3603530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.6	chr6	+	3625	29	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	43.8732375074801	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	-19	True	NA	15	True	AATAAA	-12	NA	3498400	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3532978_3533058_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.7	chr6	+	4359	27	NNC	ENSMUSG00000001376.18	novel	3788	28	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.0726865644806	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTGAGACTACTA	-19	True	NA	22	True	AATAAA	-19	NA	3498400	3603315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3521346_3522374_3522682_3522719_3524092_3524208_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592484_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ES.27928.8	chr6	+	5885	27	FSM	ENSMUSG00000001376.18	ENSMUST00000170873.10	3687	27	0	-2198	0	-7	multi-exon	FALSE	canonical	2	105	junction_25	20.2255404181718	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACCAGGTGTGTGAG	-16	True	NA	15	True	AATAAA	-12	NA	3498403	3603308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127
ES.27929.1	chr6	-	1193	2	Intergenic	novelGene_23223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	3652082	3650436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_3650705_3651157
ES.2793.1	chr10	-	181	1	Intergenic	novelGene_2131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAAGAAGA	6435	False	NA	NA	False	NA	NA	NA	56222230	56222049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_56222000_56222200
ES.27930.1	chr6	+	729	2	FSM	ENSMUSG00000032766.10	ENSMUST00000031670.10	919	2	184	6	184	-6	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGTTGGTGACTTAA	12	False	NA	6	True	AATAAA	-16	NA	4004087	4008439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_4004412_4008034
ES.27931.1	chr6	-	1493	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	21	2	-21	-2	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTGTGTGTTCTTGGC	-14	True	NA	-2	True	ATTAAA	-20	NA	4086951	4076900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ES.27931.2	chr6	-	5681	3	ISM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	21	8	-21	-8	intron_retention	FALSE	canonical	3	308	junction_1	7.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTAAGTGTTGTGTGTT	-14	True	NA	-8	True	ATTAAA	-14	NA	4086951	4076906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_4078037_4079960_4080018_4082457
ES.27931.3	chr6	-	3897	3	NIC	ENSMUSG00000032757.7	novel	1516	4	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	308	junction_1	46	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTAAGTGTTGTGTG	14	True	NA	-10	True	ATTAAA	-12	NA	4086923	4076908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_4078037_4079960_4082583_4086776
ES.27931.4	chr6	-	8100	2	FSM	ENSMUSG00000032757.7	ENSMUST00000204806.2	295	2	-6851	-954	-12	-20	multi-exon	FALSE	canonical	3	308	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTATAACTTCCTTAA	-5	True	NA	-20	True	ATTAAA	-2	NA	4086942	4076918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4078037_4079960
ES.27931.5	chr6	-	521	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	21	974	-21	0	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGGCTTTGAATTTGT	-14	True	NA	-9	True	ATTAAA	-18	NA	4086951	4077872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ES.27931.6	chr6	-	2125	4	NIC	ENSMUSG00000032757.7	novel	1516	4	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	168.752942361179	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGTGTGGGCTTTGAA	-5	True	NA	-14	True	ATTAAA	-13	NA	4086942	4077877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_4078037_4079960_4081636_4082457_4082583_4086776
ES.27931.7	chr6	-	2961	3	NIC	ENSMUSG00000032757.7	novel	1516	4	NA	NA	16	-5	intron_retention	FALSE	canonical	3	308	junction_1	46	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGTGTGGGCTTTGAA	-19	True	NA	-14	True	ATTAAA	-13	NA	4086956	4077877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_4078037_4079960_4082583_4086776
ES.27932.1	chr6	+	5242	50	NNC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	96	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.1570955529345	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTAAAATTCCTTGC	349	False	NA	NA	False	AATAAA	-45	NA	4505588	4541535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4505910_4509578_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536262_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ES.27932.2	chr6	+	4685	50	NNC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	-84	-537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.1570955529345	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACTTGTGGCTTCTGA	378	False	NA	NA	False	NA	NA	NA	4505617	4541007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4505910_4509578_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536262_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ES.27932.3	chr6	+	5120	50	NNC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.19442328285965	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTAAAATTCCTTGC	-1	True	NA	NA	False	AATAAA	-45	NA	4505701	4541535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4505910_4509585_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536260_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ES.27933.1	chr6	-	178	1	Intergenic	novelGene_23224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	4564608	4564430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_4564400_4564600
ES.27934.1	chr6	+	4133	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	-172	0	-172	0	multi-exon	TRUE	canonical	3	22	junction_3	9.97574914150592	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTGGTTTTTGTTT	-1	True	NA	30	True	AATAAA	-41	NA	4600666	4643355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.10	chr6	+	3626	16	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.2505716491432	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTGGTTTTTGTTT	23	True	NA	30	True	AATAAA	-41	NA	4600950	4643355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.11	chr6	+	3612	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	118	231	8	-231	multi-exon	FALSE	canonical	3	22	junction_3	9.97574914150592	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATAAGTGATCTGTTCG	29	False	NA	NA	False	AGTAAA	-13	NA	4600956	4643124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.12	chr6	+	3780	17	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	14	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.6185477841802	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAATCAAGCCATGTG	35	False	NA	18	True	AATAAA	-29	NA	4600962	4643343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4608633_4608755_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.13	chr6	+	3830	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.2765566298093	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTGGTTTTTGTTT	36	False	NA	30	True	AATAAA	-41	NA	4600963	4643355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637041_4640914_4641008_4641851
ES.27934.14	chr6	+	3477	17	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	22	-231	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13.9143585910383	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATAAGTGATCTGTTCG	43	False	NA	NA	False	AGTAAA	-13	NA	4600970	4643124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.15	chr6	+	3824	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.1316107413603	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCAAGCCATGTGTGGT	49	False	NA	22	True	AATAAA	-33	NA	4600976	4643347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614639_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.16	chr6	+	3667	19	NNC	ENSMUSG00000015189.13	novel	396	5	NA	NA	6172	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4939930187555	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATAAGTGATCTGTTCG	6230	False	NA	NA	False	AGTAAA	-13	NA	4607374	4643124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4607558_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4626604_4626822_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.17	chr6	+	3663	18	NNC	ENSMUSG00000015189.13	novel	396	5	NA	NA	6178	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.8173579795331	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATCAAGCCATGTGTG	6236	False	NA	20	True	AATAAA	-31	NA	4607380	4643345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4607558_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614710_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.18	chr6	+	5095	9	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-8310	-10	intron_retention	FALSE	canonical	3	34	junction_2	9.32402809948576	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATCAAGCCATGTGTG	NA	False	NA	20	True	AATAAA	-31	NA	4622816	4643345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4637047_4640914_4641008_4641851
ES.27934.19	chr6	+	2154	1	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	10051	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTATTGGCAAAGAA	NA	False	NA	6	True	AATAAA	-17	NA	4641177	4643331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4641200_4643300
ES.27934.2	chr6	+	4105	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-53	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.5258307281221	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTATTGGCAAAGAAT	34	False	NA	7	True	AATAAA	-18	NA	4600785	4643332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613120_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.3	chr6	+	3727	19	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-46	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.9651241082213	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAATCAAGCCATGTGT	-25	True	NA	19	True	AATAAA	-30	NA	4600902	4643344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4600964_4601122_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.4	chr6	+	3852	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-39	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	14.2797070909062	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAAGCCATGTGTGGTT	-18	True	NA	23	True	AATAAA	-34	NA	4600909	4643348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624451_4625472_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.5	chr6	+	3780	17	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-38	-7	combination_of_known_junctions	TRUE	canonical	1	1	junction_13	14.1883259671464	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAAGCCATGTGTGGTT	-17	True	NA	23	True	AATAAA	-34	NA	4600910	4643348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.6	chr6	+	3825	17	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-31	-12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	14.4908376224427	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAATCAAGCCATGTG	-10	True	NA	18	True	AATAAA	-29	NA	4600917	4643343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.7	chr6	+	3875	18	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-16	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.1316107413603	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATCAAGCCATGTGTG	5	True	NA	20	True	AATAAA	-31	NA	4600932	4643345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614630_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.8	chr6	+	3644	17	NNC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-7	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.7633285959608	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATTGGCAAAGA	14	True	NA	5	True	AATAAA	-16	NA	4600941	4643330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631216_4631287_4631518_4631599_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27934.9	chr6	+	3738	16	NIC	ENSMUSG00000015189.13	novel	3961	18	NA	NA	-5	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	14.0639807862339	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATCAAGCCATGTGTG	16	True	NA	20	True	AATAAA	-31	NA	4600943	4643345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4601302_4607982_4608080_4608633_4608755_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ES.27935.1	chr6	+	6666	2	FSM	ENSMUSG00000092035.9	ENSMUST00000176204.8	6667	2	1	0	1	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCCTGATCATTTCAG	-20	True	NA	NA	False	AATAAA	-36	NA	4747306	4760517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_4747579_4754123
ES.27935.2	chr6	+	6368	2	FSM	ENSMUSG00000092035.9	ENSMUST00000176551.3	6567	2	-39	238	-39	-235	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAACTCACCACGTCT	0	True	NA	NA	False	NA	NA	NA	4747366	4760279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_4747579_4754123
ES.27936.1	chr6	-	1675	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	20	1	4	-1	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGTAAAATTTCTTT	9888	False	NA	NA	False	AATAAA	-35	NA	4747184	4674350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ES.27936.2	chr6	-	1558	10	FSM	ENSMUSG00000004631.16	ENSMUST00000126151.8	1522	10	-35	-1	-4	1	multi-exon	FALSE	canonical	0	0	junction_9	7.1336448530109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTGGTAAAATTTCT	9880	False	NA	NA	False	AATAAA	-33	NA	4747192	4674352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4746979
ES.27936.3	chr6	-	1530	11	NNC	ENSMUSG00000004631.16	novel	1696	11	NA	NA	-2155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.87313611097583	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTGTGGTAAAATTTC	7710	False	NA	NA	False	AATAAA	-32	NA	4749362	4674353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4749299
ES.27936.4	chr6	-	5310	1	FSM	ENSMUSG00000004631.16	ENSMUST00000204897.2	3066	1	-2251	7	-2251	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	4719	False	NA	NA	False	NA	NA	NA	4742458	4737148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_4737100_4742500
ES.27936.5	chr6	-	3312	2	Antisense	novelGene_ENSMUSG00000092035.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGAGTCCGGACTGCTT	NA	False	NA	NA	False	NA	NA	NA	4757223	4747366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_4747577_4754121
ES.27937.1	chr6	+	10169	20	NNC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.48324044374196	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGAGTCCATGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	4902891	5165661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143486_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.10	chr6	+	8963	19	NNC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	4.20647648804132	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCGGAGTCCATGTTTC	1147	False	NA	1	True	AATAAA	-14	NA	4906359	5165659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5158064_5158272_5159551
ES.27937.11	chr6	+	1817	2	NNC	ENSMUSG00000032827.16	novel	3769	3	NA	NA	100	28478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTGCCTTTTTATTTT	1294	False	NA	NA	False	AATAAA	-16	NA	4906506	4935265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4906845_4933786
ES.27937.12	chr6	+	8919	17	NIC	ENSMUSG00000032827.16	novel	9395	18	NA	NA	292	1	intron_retention	FALSE	canonical	0	0	junction_5	3.60338382634989	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGAGTCCATGTTTCTTT	1486	False	NA	4	True	AATAAA	-17	NA	4906698	5165662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.13	chr6	+	2628	1	Intergenic	novelGene_23225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTGCCTTTTTATTTT	9134	False	NA	NA	False	AATAAA	-16	NA	4932637	4935265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_4932600_4935300
ES.27937.14	chr6	+	1961	1	Intergenic	novelGene_23227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	4952398	4954359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_4952400_4954400
ES.27937.15	chr6	+	184	1	Intergenic	novelGene_23228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAATGATTTAATTCTA	NA	False	NA	NA	False	NA	NA	NA	4975146	4975330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_4975100_4975300
ES.27937.16	chr6	+	8762	17	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-53102	0	intron_retention	FALSE	canonical	1	1	junction_12	3.72491610643783	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGAGTCCATGTTTCTT	9223	False	NA	3	True	AATAAA	-16	NA	5057556	5165661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.17	chr6	+	5571	7	NNC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-32045	4861	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	5.15320827791344	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTCAGACAAGCTGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	5078613	5121369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5121000
ES.27937.18	chr6	+	7502	10	ISM	ENSMUSG00000032827.16	ENSMUST00000164110.9	9395	18	210242	-521	215	521	3prime_fragment	FALSE	canonical	1	1	junction_6	3.46766367429494	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAAGCGATGCCCAGGC	3015	False	NA	NA	False	NA	NA	NA	5113673	5165037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_5113831_5115118_5115216_5115308_5115481_5134016_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5158088_5158272_5159551
ES.27937.19	chr6	+	4531	2	NIC	ENSMUSG00000032827.16	novel	9547	16	NA	NA	42729	1777	intron_retention	FALSE	canonical	3	9	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACACTCCATGCTTGGA	NA	False	NA	NA	False	AATACA	-20	NA	5156187	5161998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_5158272_5159551
ES.27937.2	chr6	+	6334	20	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	6	1590	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.93858672291994	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAAGCTTCTGTGTGTT	-41	True	NA	NA	False	AAAAAG	-10	NA	4902922	5161811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5158088_5158272_5159551
ES.27937.3	chr6	+	5919	21	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-10	1192	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.57036412708844	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAGAAACTTAATCCTA	0	True	NA	NA	False	NA	NA	NA	4902963	5161413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.4	chr6	+	10101	20	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.93858672291994	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCGGAGTCCATGTTTC	40	True	NA	1	True	AATAAA	-14	NA	4903003	5165659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5158088_5158272_5159551
ES.27937.5	chr6	+	10117	21	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	3.57036412708844	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGAGTCCATGTTTCTT	50	True	NA	3	True	AATAAA	-16	NA	4903013	5165661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4903032_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.6	chr6	+	5955	16	NIC	ENSMUSG00000032827.16	novel	9547	16	NA	NA	-32	1774	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	4.64566703738249	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAACACTCCATGCTT	26	False	NA	NA	False	AATACA	-17	NA	4903287	5161995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4903449_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5156120_5156241_5158088_5158272_5159551
ES.27937.7	chr6	+	6611	21	NNC	ENSMUSG00000032827.16	novel	9395	18	NA	NA	-29	1782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	4.21040378111174	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCATGCTTGGATCAGC	29	False	NA	NA	False	AATACA	-25	NA	4903290	5162003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4903449_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134676_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27937.8	chr6	+	3320	13	NNC	ENSMUSG00000032827.16	novel	9547	16	NA	NA	22	4869	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	4.52462398683274	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCTGAATCTGAGCAT	36	False	NA	NA	False	AATAAA	-29	NA	4903394	5121377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_4903449_4905225_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5121000
ES.27937.9	chr6	+	6058	20	NIC	ENSMUSG00000032827.16	novel	4810	20	NA	NA	307	1896	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	3.59670517121471	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAATGAGTTCTTTT	510	False	NA	NA	False	NA	NA	NA	4905722	5162117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_4906845_5045935_5046069_5057457_5057579_5063990_5064096_5077479_5077616_5083040_5083107_5100431_5100588_5110999_5111054_5113600_5113831_5115118_5115216_5115308_5115481_5134016_5134175_5134688_5134933_5143227_5143316_5143405_5143490_5154008_5154208_5156120_5156241_5157003_5157028_5158088_5158272_5159551
ES.27938.1	chr6	-	178	1	Intergenic	novelGene_23226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCACAAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	4949113	4948935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_4948900_4949100
ES.27939.1	chr6	-	176	1	Intergenic	novelGene_23229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3337	False	NA	NA	False	NA	NA	NA	5015793	5015617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5015600_5015800
ES.2794.1	chr10	+	3008	3	NNC	ENSMUSG00000050953.11	novel	421	3	NA	NA	-81	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTGCATGTCTTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	56253344	56266515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_56253615_56263629_56264662_56264809
ES.2794.2	chr10	+	3136	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	-57	-8	-57	8	multi-exon	FALSE	canonical	3	36	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCATGTCTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-27	NA	56253368	56266519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_56253615_56263629
ES.2794.3	chr10	+	3101	3	NNC	ENSMUSG00000050953.11	novel	3071	2	NA	NA	0	46423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGCCAGCTCTCCA	NA	False	NA	NA	False	NA	NA	NA	56253425	56325032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_56253615_56263629_56266505_56324995
ES.27940.1	chr6	-	4018	1	Intergenic	novelGene_23230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGGAAACC	NA	False	NA	NA	False	NA	NA	NA	5025786	5021768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5021800_5025800
ES.27941.1	chr6	-	188	1	Intergenic	novelGene_23231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACGTACAGCAAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	5030848	5030660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5030700_5030800
ES.27942.1	chr6	-	3654	1	Antisense	novelGene_ENSMUSG00000032827.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTACATACTACTTTAGA	NA	False	NA	NA	False	NA	NA	NA	5081606	5077952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_5078000_5081600
ES.27943.1	chr6	-	177	1	Intergenic	novelGene_23232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	5104814	5104637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5104600_5104800
ES.27944.1	chr6	-	3822	1	FSM	ENSMUSG00000107881.2	ENSMUST00000203092.2	4229	1	407	0	407	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGGGCTCACTTTT	860	False	NA	NA	False	AATAAA	-13	NA	5220079	5216257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5216300_5220100
ES.27944.2	chr6	-	2265	1	FSM	ENSMUSG00000107881.2	ENSMUST00000203092.2	4229	1	1420	544	1420	-544	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTCTCCTGTGTTGGT	1873	False	NA	NA	False	NA	NA	NA	5219066	5216801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5216800_5219100
ES.27944.3	chr6	-	1942	1	FSM	ENSMUSG00000107881.2	ENSMUST00000203092.2	4229	1	407	1880	407	-1880	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGCCTTGGTCATGG	860	False	NA	NA	False	NA	NA	NA	5220079	5218137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5218100_5220100
ES.27945.1	chr6	+	176	1	Intergenic	novelGene_23233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTGACAGAT	NA	False	NA	NA	False	NA	NA	NA	5222988	5223164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5223000_5223200
ES.27946.1	chr6	+	141	1	Intergenic	novelGene_23234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	5231779	5231920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5231800_5231900
ES.27947.1	chr6	-	1727	7	NIC	ENSMUSG00000029759.10	novel	1837	9	NA	NA	-7	119	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	14.7044966667419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGATTTGTAGTTCATA	10	True	NA	NA	False	AATAAA	-43	NA	5256242	5220732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5221723_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5254515_5254587_5256152
ES.27947.2	chr6	-	1901	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	55	-119	2	119	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGATTTGTAGTTCATA	21	True	NA	NA	False	AATAAA	-43	NA	5256231	5220732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
ES.27947.3	chr6	-	1389	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	55	393	2	-393	multi-exon	FALSE	canonical	3	12	junction_4	13.4350288425444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTCTGAGGCTTCTGCAG	21	True	NA	NA	False	ACTAAA	-20	NA	5256231	5221244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
ES.27947.4	chr6	-	1186	8	NIC	ENSMUSG00000029759.10	novel	2014	9	NA	NA	4	-658	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	15.6204993518133	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGAACTGTAATTATTT	23	True	NA	NA	False	AGTAAA	-18	NA	5256229	5221509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5246047_5246334_5254515_5254587_5256152
ES.27947.5	chr6	-	835	7	NIC	ENSMUSG00000029759.10	novel	1837	9	NA	NA	0	-658	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	15.5715195861619	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGAACTGTAATTATTT	17	True	NA	NA	False	AGTAAA	-18	NA	5256235	5221509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5246277_5246334_5254515_5254587_5256152
ES.27947.6	chr6	-	687	5	NIC	ENSMUSG00000029759.10	novel	1837	9	NA	NA	2	184	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	17.3925271309261	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCATACTAAATTTGTGA	21	True	NA	NA	False	AATAAA	-19	NA	5256231	5232209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5232525_5240812_5240979_5246277_5246334_5254515_5254587_5256152
ES.27947.7	chr6	-	1912	4	NIC	ENSMUSG00000029759.10	novel	921	5	NA	NA	2	1140	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.9814733091416	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAGAACAA	21	True	NA	NA	False	NA	NA	NA	5256231	5235292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5236999_5246277_5246334_5254515_5254587_5256152
ES.27947.8	chr6	-	4186	1	Intergenic	novelGene_23235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	9145	False	NA	NA	False	NA	NA	NA	5245371	5241185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5241200_5245400
ES.27947.9	chr6	-	280	3	ISM	ENSMUSG00000029759.10	ENSMUST00000156848.8	921	5	-20	9774	-1	8373	5prime_fragment	FALSE	canonical	3	44	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCCAGATGGACCCCT	18	True	NA	NA	False	ATTAAA	-12	NA	5256234	5246206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_5246334_5254515_5254587_5256152
ES.27948.1	chr6	+	512	3	Antisense	novelGene_ENSMUSG00000032667.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAACTTCTGACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	5271861	5278100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_5271963_5276700_5276823_5277811
ES.27949.1	chr6	-	1798	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	132	479	7	-479	multi-exon	FALSE	canonical	2	9	junction_7	2.57087047515039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTTGTTTGTTTGTT	16	True	NA	NA	False	AATAAA	-26	NA	5298323	5264625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
ES.27949.2	chr6	-	2185	11	NNC	ENSMUSG00000032667.18	novel	2409	9	NA	NA	-19	-481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5.46351535185909	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTATTTGTTTGTTTG	-10	True	NA	NA	False	AATAAA	-24	NA	5298349	5264627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277327_5277597_5277871_5277928_5278718_5278813_5289012_5289084_5298211
ES.27949.3	chr6	-	1969	10	NIC	ENSMUSG00000032667.18	novel	2409	9	NA	NA	53	-481	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	3.91893157523298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTTATTTGTTTGTTTG	0	True	NA	NA	False	AATAAA	-24	NA	5298402	5264627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5278718_5278813_5289012_5289084_5298211
ES.2795.1	chr10	-	251	1	Intergenic	novelGene_2132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56514084	56513833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_56513800_56514100
ES.27950.1	chr6	+	3731	7	NNC	ENSMUSG00000042607.16	novel	1143	4	NA	NA	-65711	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.54729944229879	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGGCGTTTCCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	5317674	5433019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_5317981_5372874_5373037_5390598_5390796_5398223_5398524_5423341_5423833_5429739_5429854_5430858
ES.27950.2	chr6	+	2963	1	Intergenic	novelGene_23237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5359758	5362721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5359800_5362700
ES.27950.3	chr6	+	5103	2	Intergenic	novelGene_23238	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTTTTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	5361772	5376470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5363280_5372874
ES.27950.4	chr6	+	1301	1	Intergenic	novelGene_23239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTCTGGTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	5362422	5363723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5362400_5363700
ES.27950.5	chr6	+	1236	1	Intergenic	novelGene_23240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGTCTGTTAGTAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	5364934	5366170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5364900_5366200
ES.27950.6	chr6	+	2829	4	NNC	ENSMUSG00000042607.16	novel	3286	6	NA	NA	32698	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.85861230093008	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCTCTGGCGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	5423124	5433015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_5423192_5423341_5423833_5429739_5429854_5430858
ES.27951.1	chr6	-	242	1	Intergenic	novelGene_23236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTAGCCTTGAGTTAT	3935	False	NA	NA	False	NA	NA	NA	5321346	5321104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5321100_5321300
ES.27952.1	chr6	-	143	1	Intergenic	novelGene_23241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	5441943	5441800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5441800_5441900
ES.27953.1	chr6	-	3876	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	-390	-2	-390	2	multi-exon	FALSE	canonical	2	10	junction_7	4.42831796509691	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTCTTATAAAATTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	5496699	5483348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
ES.27953.2	chr6	-	3601	11	NNC	ENSMUSG00000019577.7	novel	3484	11	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.32734604068895	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAATGTGGTCTTATA	-6	True	NA	NA	False	AATAAA	-13	NA	5496312	5483356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494769_5495032_5496032
ES.27953.3	chr6	-	4205	8	NIC	ENSMUSG00000019577.7	novel	3484	11	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_1	7.55928946018454	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAATGTGGTCTTATA	-1	True	NA	NA	False	AATAAA	-13	NA	5496307	5483356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_5485593_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5492778_5494889_5495032_5496032
ES.27953.4	chr6	-	6639	9	ISM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	-51	9	-51	-9	intron_retention	FALSE	canonical	2	10	junction_7	4.74341649025257	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAGTAATGTGGTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	5496360	5483359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705
ES.27954.1	chr6	-	174	1	Intergenic	novelGene_23242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5556628	5556454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5556500_5556600
ES.27955.1	chr6	-	173	1	Intergenic	novelGene_23243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATATTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	5731161	5730988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5731000_5731200
ES.27956.1	chr6	-	4622	1	Intergenic	novelGene_23244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCTAATGAACTTATAGA	NA	False	NA	NA	False	NA	NA	NA	5837950	5833328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5833300_5838000
ES.27957.1	chr6	+	179	1	Intergenic	novelGene_23245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5841130	5841309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5841100_5841300
ES.27958.1	chr6	+	142	1	Intergenic	novelGene_23246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTTATGCTGCTAT	NA	False	NA	NA	False	NA	NA	NA	5878257	5878399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5878300_5878400
ES.27959.1	chr6	+	148	1	Intergenic	novelGene_23247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAATATAAAA	NA	False	NA	NA	False	NA	NA	NA	5883992	5884140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_5884000_5884100
ES.2796.1	chr10	+	2720	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-111	-5	-100	5	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTCATTGTTGCAAA	NA	False	NA	18	True	NA	NA	NA	57362380	57389236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ES.2796.10	chr10	+	4985	12	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	7	5	intron_retention	FALSE	canonical	3	29	junction_10	56.9738231903531	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTCATTGTTGCAAA	NA	False	NA	18	True	NA	NA	NA	57362498	57389236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57387625_57387998
ES.2796.12	chr10	+	5981	2	FSM	ENSMUSG00000019878.9	ENSMUST00000220162.2	2304	2	-3407	-270	-3407	0	multi-exon	FALSE	canonical	3	192	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57382876	57389231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_57387625_57387998
ES.2796.13	chr10	+	4298	2	FSM	ENSMUSG00000019878.9	ENSMUST00000220162.2	2304	2	-1992	-2	-1992	2	multi-exon	FALSE	canonical	3	192	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57384291	57388963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_57387625_57387998
ES.2796.2	chr10	+	2427	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGTTTGTTGAGTCGT	NA	False	NA	17	True	AATAAA	-18	NA	57362455	57388964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
ES.2796.3	chr10	+	2371	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	-34	267	-23	3	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGTTTGTTGAGTCGT	NA	False	NA	17	True	AATAAA	-18	NA	57362457	57388964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ES.2796.4	chr10	+	4735	12	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	-5	2	intron_retention	FALSE	canonical	3	29	junction_10	56.9738231903531	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362475	57388963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57387625_57387998
ES.2796.5	chr10	+	2679	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTCATTGTTGCAAA	NA	False	NA	18	True	NA	NA	NA	57362475	57389236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
ES.2796.6	chr10	+	2383	10	NIC	ENSMUSG00000019878.9	novel	2604	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.2529722615572	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57362475	57389231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362698_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ES.2796.7	chr10	+	3904	1	NIC	ENSMUSG00000019878.9	novel	2695	10	NA	NA	4	-14608	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57362484	57366388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362500_57366400
ES.2796.8	chr10	+	2346	12	NNC	ENSMUSG00000019878.9	novel	2604	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	64.5280386234933	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTGTTTGTTGAGTCG	NA	False	NA	16	True	AATAAA	-17	NA	57362493	57388963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387637_57387998
ES.2796.9	chr10	+	3154	1	NIC	ENSMUSG00000019878.9	novel	2695	10	NA	NA	6	-15345	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTTATTTTTATTAAC	NA	False	NA	NA	False	NA	NA	NA	57362497	57365651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_57362500_57365700
ES.27960.1	chr6	-	5199	1	Intergenic	novelGene_23248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAAAACCAACCCGAA	NA	False	NA	NA	False	NA	NA	NA	5997615	5992416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_5992400_5997600
ES.27961.1	chr6	+	3186	1	Antisense	novelGene_ENSMUSG00000015112.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAAAATCTCCCGCTGC	NA	False	NA	NA	False	NA	NA	NA	6042300	6045486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_6042300_6045500
ES.27962.1	chr6	+	5779	1	Intergenic	novelGene_23249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCCTCTATTTATTAG	NA	False	NA	NA	False	AAAAAG	-4	NA	6079323	6085102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_6079300_6085100
ES.27962.2	chr6	+	3607	1	Intergenic	novelGene_23250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCCACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	6079337	6082944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_6079300_6082900
ES.27963.1	chr6	+	1503	3	Antisense	novelGene_ENSMUSG00000015112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAAGGAGATGGCTCA	NA	False	NA	NA	False	ATTAAA	-11	NA	6110986	6129263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_6111198_6126243_6126415_6128142
ES.27964.1	chr6	+	8738	4	Antisense	novelGene_ENSMUSG00000015112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAAATCAGAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	6162522	6171614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_6170486_6170651_6170898_6171012_6171057_6171129
ES.27965.10	chr6	-	3067	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6217265	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
ES.27965.11	chr6	-	3246	20	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-1087	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	290.138490190986	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6192406	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136329_6136975_6137086_6152407_6152524_6180970_6181114_6191263_6191318_6192314
ES.27965.12	chr6	-	2924	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	34847	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	268.017191321284	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6139104	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136329_6136995_6137086_6138998
ES.27965.15	chr6	-	8030	5	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	35504	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	295.016419034602	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6059699	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6055025_6055293
ES.27965.16	chr6	-	2797	15	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	34783	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	181.253515096105	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6139168	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6138998
ES.27965.18	chr6	-	3167	19	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	219.001839160212	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6217165	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6190769_6190827_6191263_6191318_6216995
ES.27965.19	chr6	-	2626	15	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-7043	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	179.989979879833	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6180994	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970
ES.27965.2	chr6	-	3207	19	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	219.461715213484	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6217165	6041217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6182686_6182783_6191263_6191318_6216995
ES.27965.20	chr6	-	2852	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.548177908569	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	28	True	NA	-4	True	AATAAA	-15	NA	6217046	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.21	chr6	-	2919	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	263.036089491537	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	-3	True	NA	-4	True	AATAAA	-15	NA	6217141	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6190769_6190827_6191263_6191318_6216995
ES.27965.22	chr6	-	3250	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-1042	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_16	219.724676797464	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6192361	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6191908
ES.27965.24	chr6	-	3035	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-1087	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	197.520197381692	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6192406	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6192314
ES.27965.25	chr6	-	3469	21	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	296.819995957146	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	1	True	NA	-4	True	AATAAA	-15	NA	6217073	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136488_6136975_6137086_6152407_6152524_6180970_6181114_6191263_6191318_6191908_6191990_6216995
ES.27965.26	chr6	-	4870	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	199.158367545333	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	16	False	6217138	-4	True	AATAAA	-15	NA	6217122	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6116909_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.27	chr6	-	2886	15	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-7071	0	intron_retention	FALSE	canonical	3	590	junction_12	51.2074611910477	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6181022	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970
ES.27965.28	chr6	-	2857	16	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	13141	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	175.016748404895	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	8966	False	NA	-4	True	AATAAA	-15	NA	6160810	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6160696
ES.27965.31	chr6	-	3204	19	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	9667	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	219.198343014373	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	9687	False	NA	-5	True	AATAAA	-14	NA	6207451	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6205984_6206134_6207335
ES.27965.33	chr6	-	3027	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	222.271460327512	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	11	False	NA	-5	True	AATAAA	-14	NA	6217127	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042560_6042650_6042740_6042900_6052764_6052904_6073401_6073501_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.34	chr6	-	3047	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	168.024672763971	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	30	False	6217138	-5	True	AATAAA	-14	NA	6217108	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115110_6117104_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.35	chr6	-	7143	20	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	277.883891335414	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	19	False	6217138	-5	True	AATAAA	-14	NA	6217119	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6091763_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136619_6136779_6137086_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.36	chr6	-	3079	18	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	168.056177788065	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	-3	True	NA	-5	True	AATAAA	-14	NA	6217141	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109942_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.37	chr6	-	3234	19	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	219.505054920843	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	-3	True	NA	-5	True	AATAAA	-14	NA	6217141	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6205984_6206134_6216995
ES.27965.38	chr6	-	3859	3	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	171723	2	49808	-1	3prime_fragment	FALSE	canonical	3	629	junction_2	32	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	6045395	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6042333_6042558_6042650_6042740
ES.27965.39	chr6	-	3037	17	NIC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	12	junction_5	198.159411443792	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	6217171	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.4	chr6	-	3214	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_13	48.4240210344906	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6217268	6041217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.41	chr6	-	3044	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	9678	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	166.985650917846	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	9698	False	NA	-5	True	AATAAA	-14	NA	6207440	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6207335
ES.27965.42	chr6	-	5009	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_5	169.246757262141	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	30	False	6217138	-5	True	AATAAA	-14	NA	6217108	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6094631_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.43	chr6	-	2735	16	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	47	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	248.468052943096	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	3	True	NA	-5	True	AATAAA	-14	NA	6217071	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6152407_6152524_6191263_6191318_6216995
ES.27965.45	chr6	-	2083	1	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	51901	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	530	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	6043302	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6041200_6043300
ES.27965.46	chr6	-	2355	10	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-17929	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	224.139727143473	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	6113132	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6112798
ES.27965.48	chr6	-	3382	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-1032	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	165.409923845501	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	6192351	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6191908
ES.27965.5	chr6	-	3311	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_10	172.752792578731	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-3	True	NA	-3	True	AATAAA	-16	NA	6217141	6041217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114317_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.51	chr6	-	3180	19	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	239.366060900686	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	-17	True	NA	-5	True	AATAAA	-14	NA	6217091	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6201995_6202138_6216995
ES.27965.52	chr6	-	4273	20	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	288.096744292646	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTGCTTGCTCTTGT	-14	True	NA	-5	True	AATAAA	-14	NA	6217088	6041219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6094631_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136718_6136852_6137086_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.57	chr6	-	3048	18	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-1102	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	224.855278332023	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTATTGATTGCTTGCT	NA	False	NA	-10	True	AATAAA	-9	NA	6192421	6041224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042657_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6192314
ES.27965.58	chr6	-	2885	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	8	228	8	-228	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGATTCCAATTTTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	6217165	6041446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.59	chr6	-	4326	21	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	33	-233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	294.685238856649	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATGCTGATTCCAATT	-11	True	NA	NA	False	AATAAA	-14	NA	6217085	6041451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6091763_6092055_6094631_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6136227_6136718_6136852_6137086_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.6	chr6	-	2834	16	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	176.689482803401	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	-11	True	NA	-3	True	AATAAA	-16	NA	6217085	6041217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6216995
ES.27965.60	chr6	-	2698	17	NNC	ENSMUSG00000015112.16	novel	3121	18	NA	NA	-12	-234	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACATGCTGATTCCAAT	8	True	NA	NA	False	AATAAA	-13	NA	6217130	6041452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
ES.27965.61	chr6	-	1501	6	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	18056	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	275.586646991468	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACATGCTGATTCCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	6077147	6041452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6077056
ES.27965.62	chr6	-	3034	4	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	162003	682	40088	-681	3prime_fragment	FALSE	canonical	3	629	junction_2	35.1883819210577	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAACTTGATGTGGAG	1134	False	NA	NA	False	TTTAAA	-16	NA	6055115	6041899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764
ES.27965.63	chr6	-	2251	15	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	-34	169	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	178.774698593349	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGTGTTATTGTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	6217207	6068097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6068700_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.65	chr6	-	5555	14	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	-23	-11505	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	218.654465190924	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTTGCTCAGTATA	-3	True	NA	NA	False	AATAAA	-11	NA	6217141	6079771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6083882_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.67	chr6	-	5180	1	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-14987	9977	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	6110190	6105010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6105000_6110200
ES.27965.68	chr6	-	1501	12	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	20	9970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.055442822367	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	6217153	6105017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6105201_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115107_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.7	chr6	-	2721	14	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	34779	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	241.805193243011	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	6139172	6041217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6138998
ES.27965.70	chr6	-	1552	11	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	0	6074	at_least_one_novel_splicesite	FALSE	canonical	3	590	junction_6	39.8577470512321	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGAGTTTTTGAAAGG	20	False	6217138	NA	False	AATAAA	-19	NA	6217118	6108913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.71	chr6	-	4021	1	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-23389	416	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGAAAAATAACTTGGGT	NA	False	NA	NA	False	AAGAAA	-43	NA	6118592	6114571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6114600_6118600
ES.27965.72	chr6	-	3105	5	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	2	416	intron_retention	FALSE	canonical	3	53	junction_3	266.326280152748	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGAAAAATAACTTGGGT	22	False	6217138	NA	False	AAGAAA	-43	NA	6217116	6114571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
ES.27965.73	chr6	-	862	6	ISM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	8	75788	8	-2019	5prime_fragment	FALSE	canonical	3	590	junction_1	45.2972405340546	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACGTGATCATGTATATT	NA	False	NA	NA	False	AATAAA	-22	NA	6217165	6117006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.74	chr6	-	6462	1	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	36120	98	mono-exon	FALSE	NA	NA	NA	NA	NA	490	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCTTTTATAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	6137831	6131369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6131400_6137800
ES.27965.75	chr6	-	4439	2	NNC	ENSMUSG00000015112.16	novel	616	4	NA	NA	37918	63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6136033	6131404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6135640_6135829
ES.27965.76	chr6	-	754	5	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	46	90187	46	63	5prime_fragment	FALSE	canonical	3	691	junction_4	11.0792599030802	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	6217072	6131404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ES.27965.77	chr6	-	2944	3	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	26	137103	26	-46853	5prime_fragment	FALSE	canonical	3	691	junction_2	1	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-18	True	NA	NA	False	NA	NA	NA	6217092	6178320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6181114_6191263_6191318_6216995
ES.27965.78	chr6	-	3163	2	Genic_Genomic	ENSMUSG00000015112.16	novel	3067	18	NA	NA	-7570	-46853	multi-exon	TRUE	non_canonical	0	0	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6181521	6178320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_6179488_6179525
ES.27965.79	chr6	-	5304	1	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	7693	-46855	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6183626	6178322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_6178300_6183600
ES.27965.80	chr6	-	4071	1	Intergenic	novelGene_23251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	6195507	6191436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_6191400_6195500
ES.27965.9	chr6	-	4473	5	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	140747	1	18832	0	3prime_fragment	FALSE	canonical	3	629	junction_2	33.0151480384384	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6076371	6041218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401
ES.27966.1	chr6	+	178	1	Intergenic	novelGene_23252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	6537873	6538051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_6537900_6538100
ES.27967.1	chr6	-	510	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	-18	980	-13	-980	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTGATCTTTTGCCTC	9	False	NA	2	True	AATAAA	-28	NA	6578676	6558273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_6558492_6560407_6560502_6578478
ES.27967.2	chr6	-	619	3	NNC	ENSMUSG00000042541.11	novel	1472	3	NA	NA	55	-996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1703.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTGGTTCAGATGT	30	True	NA	-14	True	AATAAA	-12	NA	6578603	6558289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_6558492_6560407_6560502_6578280
ES.27967.3	chr6	-	3450	2	ISM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	15003	996	15003	-996	3prime_fragment	FALSE	canonical	3	3407	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTGGTTCAGATGT	NA	False	NA	-14	True	AATAAA	-12	NA	6563655	6558289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_6558492_6560407
ES.27967.4	chr6	-	10071	1	FSM	ENSMUSG00000042541.11	ENSMUST00000205180.2	2250	1	59	-7880	54	7880	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATACATAA	29	True	NA	NA	False	NA	NA	NA	6578604	6568533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_6568500_6578600
ES.27968.1	chr6	-	174	1	Intergenic	novelGene_23253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	6791692	6791518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_6791500_6791700
ES.27969.1	chr6	+	875	3	NIC	ENSMUSG00000042505.7	novel	966	3	NA	NA	6	-3573	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAATAATGGAAGATGTA	-9	True	NA	NA	False	AATAAA	-5	NA	6956012	7039406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_6956201_6957003_6957138_7038853
ES.27969.2	chr6	+	997	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	9	3317	6	-3317	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGTTGGGTGACCTAC	-9	True	NA	11	True	AATAAA	-19	NA	6956012	7039662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_6956201_7038853
ES.27969.3	chr6	+	687	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	13	3623	10	-3623	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTAGCCTCCTGATTT	-5	True	NA	NA	False	TTTAAA	-14	NA	6956016	7039356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_6956201_7038853
ES.2797.1	chr10	+	641	1	Intergenic	novelGene_2133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTTACTTTTTCTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	57389368	57390009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_57389400_57390000
ES.27970.1	chr6	-	91	1	Intergenic	novelGene_23254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	7023883	7023792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_7023800_7023900
ES.27971.1	chr6	+	177	1	Intergenic	novelGene_23255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGACC	NA	False	NA	NA	False	NA	NA	NA	7470775	7470952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_7470800_7471000
ES.27972.1	chr6	+	1226	7	FSM	ENSMUSG00000061762.13	ENSMUST00000185187.8	1230	7	0	4	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTTTGTCACATTTTT	NA	False	NA	2	True	AATAAA	-14	NA	7554878	7562973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7555162_7555604_7555737_7556683_7556781_7557215_7557261_7557719_7557744_7559098_7559153_7562382
ES.27973.1	chr6	+	2011	12	Antisense	novelGene_ENSMUSG00000029752.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCAATTCCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	7675355	7692492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_7675523_7675990_7676149_7676234_7676317_7677230_7677331_7677938_7678046_7680083_7680218_7681253_7681377_7681932_7682035_7682266_7682456_7685167_7685407_7689251_7689525_7692155
ES.27973.2	chr6	+	3703	1	Antisense	novelGene_ENSMUSG00000029752.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCAATTCCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	7688789	7692492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_7688800_7692500
ES.27974.1	chr6	+	2490	3	Intergenic	novelGene_23256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCGGTCTATATCATTA	NA	False	NA	NA	False	AATAAA	-25	NA	7694682	7698633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_7695144_7695499_7695705_7696809
ES.27974.2	chr6	+	1826	1	Intergenic	novelGene_23257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCGGTCTATATCATT	NA	False	NA	NA	False	AATAAA	-24	NA	7696806	7698632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_7696800_7698600
ES.27975.1	chr6	-	6707	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-4751	45	4751	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCCATGTACGTTTCAT	5	True	NA	NA	False	AATAAA	-14	NA	7693209	7670417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.10	chr6	-	3447	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-1491	45	1491	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTTTGATCTAGTCAC	5	True	NA	NA	False	AATATA	-17	NA	7693209	7673677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.101	chr6	-	1878	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2484.71404144795	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	16	True	NA	-12	True	AATAAA	-14	NA	7693198	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681313_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.102	chr6	-	7279	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-66	-3	intron_retention	FALSE	canonical	0	0	junction_6	2713.55860835687	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	1645	False	NA	-12	True	AATAAA	-14	NA	7693176	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681571_7681650_7682036_7682270_7682457_7685168_7689524_7693108
ES.27975.106	chr6	-	4389	9	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-4819	-3	intron_retention	FALSE	canonical	3	8132	junction_6	340.099227248461	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	7644	False	NA	-12	True	AATAAA	-14	NA	7687177	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168
ES.27975.107	chr6	-	1688	11	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-34980	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2573.92474831725	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	NA	False	NA	-12	True	AATAAA	-14	NA	7728234	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7728126
ES.27975.11	chr6	-	2816	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	58	871	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2482.51769029843	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGATGAATCCTTACTAT	18	True	NA	NA	False	TATAAA	-15	NA	7693196	7674297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677937_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.110	chr6	-	4231	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-20	-3	intron_retention	FALSE	canonical	0	0	junction_5	2869.79723804662	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	1691	False	NA	-12	True	AATAAA	-14	NA	7693130	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.111	chr6	-	5860	8	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	57	-3	intron_retention	FALSE	canonical	3	8132	junction_4	353.985644814439	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	17	True	NA	-12	True	AATAAA	-14	NA	7693197	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.112	chr6	-	3084	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2480.9262599759	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	-4	True	NA	-12	True	AATAAA	-14	NA	7692889	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7691657
ES.27975.114	chr6	-	3772	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	-3	intron_retention	FALSE	canonical	3	8136	junction_3	318.710683849789	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	15	True	NA	-12	True	AATAAA	-14	NA	7693199	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.116	chr6	-	2241	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	2476.9349961609	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	-2	True	NA	-12	True	AATAAA	-14	NA	7692911	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692522
ES.27975.118	chr6	-	2410	14	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-1252	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	3099.69925053818	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	315	False	NA	-12	True	AATAAA	-14	NA	7694506	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108_7693484_7693742_7693892_7694472
ES.27975.119	chr6	-	2046	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	2272	-3	at_least_one_novel_splicesite	FALSE	canonical	1	124	junction_11	2445.5788815975	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	4871	False	NA	-12	True	AATAAA	-14	NA	7689950	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7689756
ES.27975.12	chr6	-	4188	11	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	19	692	intron_retention	FALSE	canonical	0	0	junction_6	2603.59724419888	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCTTGATGGTGTCAGG	-21	True	NA	NA	False	NA	NA	NA	7693235	7674476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.121	chr6	-	2064	12	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	2473.51399917854	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	1713	False	NA	-12	True	AATAAA	-14	NA	7693108	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692896
ES.27975.122	chr6	-	4111	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-55	-3	intron_retention	FALSE	canonical	3	8136	junction_3	317.614915227544	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	-4	True	NA	-12	True	AATAAA	-14	NA	7693165	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.123	chr6	-	4779	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-44	-3	intron_retention	FALSE	canonical	3	8132	junction_5	337.085671602932	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	7	True	NA	-12	True	AATAAA	-14	NA	7693154	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7680212_7681249_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.125	chr6	-	1935	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	canonical	2	197	junction_4	2426.35896317544	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	5	True	NA	-12	True	AATAAA	-14	NA	7693209	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677314_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.128	chr6	-	1808	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2467.73477284146	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	1684	False	NA	-13	True	AATAAA	-13	NA	7693137	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680156_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.129	chr6	-	5783	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	59	-4	intron_retention	FALSE	canonical	3	8132	junction_7	310.80574319018	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	19	True	NA	-13	True	AATAAA	-13	NA	7693195	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7689524_7693108
ES.27975.13	chr6	-	2632	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	59	-690	59	690	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTCTTGATGGTGTCA	19	True	NA	NA	False	NA	NA	NA	7693195	7674478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.130	chr6	-	1775	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-50	-4	combination_of_known_splicesites	FALSE	canonical	3	68	junction_6	2583.32646988336	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	1	True	NA	-13	True	AATAAA	-13	NA	7693160	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.131	chr6	-	10186	8	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	49	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	3856.58790187621	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	9	True	NA	-13	True	AATAAA	-13	NA	7693205	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7682457_7685168_7687893_7687933_7688033_7688073_7689524_7693108
ES.27975.133	chr6	-	1914	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-67	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2486.49352494367	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	1644	False	NA	-13	True	AATAAA	-13	NA	7693177	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676139_7676230_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.134	chr6	-	5513	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	36	-4	intron_retention	FALSE	canonical	0	0	junction_5	2716.05640498531	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCCTCCTGGTTGTGG	-4	True	NA	-13	True	AATAAA	-13	NA	7693218	7675172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.136	chr6	-	1978	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2480.9262599759	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	1731	False	NA	-14	True	AATAAA	-12	NA	7693090	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692962
ES.27975.137	chr6	-	7794	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	43	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	3598.90841818309	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	3	True	NA	-14	True	AATAAA	-12	NA	7693211	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7687893_7687933_7688033_7688073_7689524_7693108
ES.27975.138	chr6	-	6747	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	33	-5	intron_retention	TRUE	non_canonical	0	0	junction_3	3552.65498354382	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	-7	True	NA	-14	True	AATAAA	-12	NA	7693221	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676318_7677230_7677332_7677939_7680212_7681249_7681378_7681933_7683660_7683861_7685407_7689251_7689524_7693108
ES.27975.139	chr6	-	3473	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	-5	intron_retention	FALSE	non_canonical	0	0	junction_8	2713.55860835687	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	15	True	NA	-14	True	AATAAA	-12	NA	7693199	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682036_7682270_7682457_7685168_7685405_7689311_7689524_7693108
ES.27975.141	chr6	-	1864	8	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-465	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3053.38638369979	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	1102	False	NA	-14	True	AATAAA	-12	NA	7693719	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676252_7682002_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.142	chr6	-	1945	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2458.78669602081	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	5	True	NA	-14	True	AATAAA	-12	NA	7693209	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675519_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.145	chr6	-	6284	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	33	-5	intron_retention	TRUE	non_canonical	0	0	junction_9	3311.51871977269	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	-7	True	NA	-14	True	AATAAA	-12	NA	7693221	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7687881_7687919_7688033_7688073_7689524_7693108
ES.27975.146	chr6	-	2984	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2480.9262599759	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	1726	False	NA	-14	True	AATAAA	-12	NA	7693095	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7691961
ES.27975.147	chr6	-	5739	13	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	19	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	3185.90030337667	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	-21	True	NA	-14	True	AATAAA	-12	NA	7693235	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7687880_7687921_7688033_7688073_7689524_7693108
ES.27975.149	chr6	-	1928	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	56	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2470.83890796039	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	16	True	NA	-14	True	AATAAA	-12	NA	7693198	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682024_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.15	chr6	-	2957	13	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-35167	678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	3134.91694356574	3657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTGGTGCAAGGATTC	NA	False	NA	NA	False	NA	NA	NA	7728421	7674490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693762_7693892_7728126
ES.27975.150	chr6	-	2027	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3307.82629431904	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	1706	False	NA	-14	True	AATAAA	-12	NA	7693115	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682415_7685168_7685407_7689251_7689524_7692896
ES.27975.151	chr6	-	2742	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	-5	intron_retention	FALSE	canonical	3	8136	junction_3	312.534956069608	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGCCTCCTGGTTGTG	5	True	NA	-14	True	AATAAA	-12	NA	7693209	7675173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.152	chr6	-	1860	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	36	105	36	-105	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGGTCGAGACAGC	-4	True	NA	29	True	AGTAAA	-12	NA	7693218	7675273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.153	chr6	-	5405	2	NIC	ENSMUSG00000029752.13	novel	448	4	NA	NA	1522	124	intron_retention	FALSE	canonical	3	8226	junction_1	0	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCATTATAAGTCAGCTG	NA	False	NA	-43	True	NA	NA	NA	7680836	7675345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7676149_7676234
ES.27975.154	chr6	-	2928	5	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	1217	intron_retention	FALSE	canonical	0	0	junction_1	3764.86303701742	3543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGTTTTAATACTGAAACAG	5	True	NA	NA	False	NA	NA	NA	7693209	7680059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.155	chr6	-	8055	3	NNC	ENSMUSG00000029752.13	novel	568	3	NA	NA	3677	1068	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTATATTGGAAGCGA	6276	False	NA	NA	False	NA	NA	NA	7688545	7680208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7681571_7681650_7683660_7683861
ES.27975.156	chr6	-	2148	5	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	4	396	intron_retention	FALSE	canonical	0	0	junction_1	3764.86303701742	3523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGATGTTGGTCACGAT	1571	False	NA	NA	False	NA	NA	NA	7693250	7680880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.16	chr6	-	2590	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	0	-589	0	589	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTTATTTGAATGCTTA	1567	False	NA	NA	False	NA	NA	NA	7693254	7674579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.17	chr6	-	3568	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	57	586	intron_retention	FALSE	canonical	3	8132	junction_6	326.707652190762	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGCTTATTTGAATGC	17	True	NA	NA	False	NA	NA	NA	7693197	7674582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.18	chr6	-	2948	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	-504	-443	-504	443	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCATTTCGAAG	1063	False	NA	-16	True	NA	NA	NA	7693758	7674725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.2	chr6	-	4756	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	45	-2800	45	2800	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTAGCCCTAGGT	5	True	NA	NA	False	ATTAAA	-16	NA	7693209	7672368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.20	chr6	-	2354	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-66	437	at_least_one_novel_splicesite	FALSE	canonical	3	235	junction_10	2398.6227866689	3657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCATAAAACTTCATT	1645	False	NA	-22	True	NA	NA	NA	7693176	7674731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685401_7689251_7689524_7693108
ES.27975.21	chr6	-	6025	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	437	intron_retention	FALSE	canonical	3	8136	junction_3	311.167735112431	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCATAAAACTTCATT	5	True	NA	-22	True	NA	NA	NA	7693209	7674731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.22	chr6	-	6584	8	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-50	437	intron_retention	FALSE	canonical	3	8136	junction_3	326.158594201392	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCATAAAACTTCATT	1	True	NA	-22	True	NA	NA	NA	7693160	7674731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.23	chr6	-	5938	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	59	436	intron_retention	FALSE	canonical	3	8132	junction_4	320.212405092307	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCCATAAAACTTCAT	19	True	NA	-23	True	NA	NA	NA	7693195	7674732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.24	chr6	-	7605	6	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-4038	434	intron_retention	FALSE	canonical	3	8132	junction_3	354.061350615963	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTCCATAAAACTTC	8425	False	NA	-25	True	NA	NA	NA	7686396	7674734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7681378_7681933_7682036_7682270_7682457_7685168
ES.27975.25	chr6	-	3294	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	434	intron_retention	FALSE	canonical	3	8132	junction_6	305.289845884202	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTCCATAAAACTTC	15	True	NA	-25	True	NA	NA	NA	7693199	7674734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.26	chr6	-	3557	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	41	433	intron_retention	FALSE	canonical	3	8136	junction_3	315.923611645381	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	1	True	NA	-26	True	NA	NA	NA	7693213	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.27	chr6	-	3986	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-50	433	intron_retention	FALSE	canonical	3	8132	junction_5	340.595883057261	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	1	True	NA	-26	True	NA	NA	NA	7693160	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.29	chr6	-	3649	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	58	433	intron_retention	FALSE	canonical	3	8132	junction_6	334.755300348047	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	18	True	NA	-26	True	NA	NA	NA	7693196	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.3	chr6	-	4426	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	9	-2434	9	2434	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGACTTGGTGTCTGT	1576	False	NA	NA	False	AGTAAA	-16	NA	7693245	7672734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.31	chr6	-	4002	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	26	433	intron_retention	FALSE	canonical	3	8136	junction_3	307.213803380731	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	-14	True	NA	-26	True	NA	NA	NA	7693228	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.32	chr6	-	4204	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	59	433	intron_retention	FALSE	canonical	3	8136	junction_3	318.710683849789	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	19	True	NA	-26	True	NA	NA	NA	7693195	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.33	chr6	-	2935	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	433	intron_retention	FALSE	canonical	3	8136	junction_3	304.686149997009	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	15	True	NA	-26	True	NA	NA	NA	7693199	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.34	chr6	-	2996	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	46	433	intron_retention	FALSE	canonical	3	8132	junction_6	332.61119945065	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	6	True	NA	-26	True	NA	NA	NA	7693208	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.35	chr6	-	6109	13	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-56	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	3185.90030337667	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	-5	True	NA	-26	True	NA	NA	NA	7693166	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7687893_7687933_7688033_7688073_7689524_7693108
ES.27975.36	chr6	-	2389	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	33	433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2470.83890796039	3657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	-7	True	NA	-26	True	NA	NA	NA	7693221	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682024_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.39	chr6	-	4581	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	433	intron_retention	FALSE	canonical	3	8136	junction_3	317.614915227544	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTTCCATAAAACTT	15	True	NA	-26	True	NA	NA	NA	7693199	7674735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.4	chr6	-	7893	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-50	2434	intron_retention	FALSE	canonical	0	0	junction_5	2716.05640498531	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGACTTGGTGTCTGT	1	True	NA	NA	False	AGTAAA	-16	NA	7693160	7672734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.41	chr6	-	3425	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	431	intron_retention	FALSE	canonical	3	8132	junction_6	326.707652190762	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTTTTTCCATAAAAC	5	True	NA	-28	True	NA	NA	NA	7693209	7674737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.44	chr6	-	2252	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	56	-307	56	307	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTGTGGAGCTGGGGG	16	True	NA	38	True	NA	NA	NA	7693198	7674861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.45	chr6	-	2531	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-19	307	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	2476.9349961609	3657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTGTGGAGCTGGGGG	-6	True	NA	38	True	NA	NA	NA	7692891	7674861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692522
ES.27975.47	chr6	-	1963	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	59	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2484.71404144795	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	19	True	NA	-5	True	AATAAA	-21	NA	7693195	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680229_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.5	chr6	-	3707	13	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	2434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2383.48313486097	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGACTTGGTGTCTGT	5	True	NA	NA	False	AGTAAA	-16	NA	7693209	7672734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7673534_7674216_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.51	chr6	-	5451	11	ISM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	139	-4	-5	4	intron_retention	FALSE	canonical	3	8132	junction_7	334.52026844423	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	1706	False	NA	-5	True	AATAAA	-21	NA	7693115	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251
ES.27975.53	chr6	-	3269	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	9	4	intron_retention	FALSE	canonical	3	8132	junction_6	334.755300348047	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	1576	False	NA	-5	True	AATAAA	-21	NA	7693245	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.55	chr6	-	3752	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-153	4	intron_retention	FALSE	canonical	3	8136	junction_3	307.213803380731	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	1414	False	NA	-5	True	AATAAA	-21	NA	7693407	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.56	chr6	-	6548	8	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	4	intron_retention	FALSE	canonical	3	8132	junction_3	326.999719153596	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	15	True	NA	-5	True	AATAAA	-21	NA	7693199	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.57	chr6	-	1981	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-632	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3259.95733379776	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	935	False	NA	-5	True	AATAAA	-21	NA	7693886	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676315_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693762
ES.27975.58	chr6	-	1970	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2487.71818844578	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	5	True	NA	-5	True	AATAAA	-21	NA	7693209	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676327_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.59	chr6	-	1963	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2465.67708837395	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	5	True	NA	-5	True	AATAAA	-21	NA	7693209	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685401_7689242_7689524_7693108
ES.27975.6	chr6	-	7257	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	49	1621	intron_retention	FALSE	canonical	3	8132	junction_4	344.380580717032	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTAGTTGACTTTTTC	9	True	NA	NA	False	TTTAAA	-10	NA	7693205	7673547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.60	chr6	-	1969	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	2	279	junction_11	2401.40713570293	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	1713	False	NA	-5	True	AATAAA	-21	NA	7693108	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692998
ES.27975.61	chr6	-	3510	11	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	9	4	intron_retention	FALSE	canonical	0	0	junction_6	2603.59724419888	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTGGGTACCAGT	1576	False	NA	-5	True	AATAAA	-21	NA	7693245	7675164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.62	chr6	-	2011	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	3	235	junction_10	2398.6227866689	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGTTGTGGGTACCAG	1554	False	NA	-6	True	AATAAA	-20	NA	7693267	7675165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685401_7689251_7689524_7693108
ES.27975.63	chr6	-	4041	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	2	374	junction_11	2374.34129012311	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGTTGTGGGTACCAG	1704	False	NA	-6	True	AATAAA	-20	NA	7693117	7675165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7690934
ES.27975.65	chr6	-	5772	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	19	3	intron_retention	FALSE	canonical	0	0	junction_5	2847.3341369604	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGTTGTGGGTACCAG	-21	True	NA	-6	True	AATAAA	-20	NA	7693235	7675165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.66	chr6	-	2095	12	NNC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-39947	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2480.9262599759	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGTTGTGGGTACCAG	NA	False	NA	-6	True	AATAAA	-20	NA	7733201	7675165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7732964
ES.27975.67	chr6	-	5763	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	46	2	intron_retention	FALSE	canonical	0	0	junction_5	2836.73892877015	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGTTGTGGGTACCA	6	True	NA	-7	True	AATAAA	-19	NA	7693208	7675166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681378_7681933_7682158_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.68	chr6	-	5307	7	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	3	8226	junction_2	288.35202251569	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7678047_7680084_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.69	chr6	-	6116	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_4	2865.43196732622	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.7	chr6	-	3588	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	33	-1620	33	1620	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTAGTTGACTTTTT	-7	True	NA	NA	False	TTTAAA	-9	NA	7693221	7673548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.70	chr6	-	6351	8	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_4	3020.20218947443	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.71	chr6	-	2819	12	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	99	junction_11	2452.70467002187	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1706	False	NA	-9	True	AATAAA	-17	NA	7693115	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692151
ES.27975.72	chr6	-	4383	8	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	0	intron_retention	FALSE	canonical	3	8136	junction_3	333.59470704948	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	15	True	NA	-9	True	AATAAA	-17	NA	7693199	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.73	chr6	-	2926	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-11	0	intron_retention	FALSE	canonical	3	8132	junction_6	305.289845884202	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1556	False	NA	-9	True	AATAAA	-17	NA	7693265	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.74	chr6	-	6431	7	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	3	8136	junction_3	342.183998586855	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.75	chr6	-	3112	11	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_7	2584.38658872855	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	9	True	NA	-9	True	AATAAA	-17	NA	7693205	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682158_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.77	chr6	-	6196	8	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	0	intron_retention	FALSE	canonical	3	8136	junction_3	326.158594201392	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	5	True	NA	-9	True	AATAAA	-17	NA	7693209	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.78	chr6	-	7564	6	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	59	0	intron_retention	FALSE	canonical	3	8226	junction_1	245.647389564799	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	19	True	NA	-9	True	AATAAA	-17	NA	7693195	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7676149_7676234_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.79	chr6	-	4581	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_4	2853.04034102219	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1577	False	NA	-9	True	AATAAA	-17	NA	7693244	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7676149_7676234_7676317_7677230_7678047_7680084_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.8	chr6	-	4121	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	55	1619	intron_retention	FALSE	canonical	3	8136	junction_3	304.686149997009	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATGTAGTTGACTTTT	15	True	NA	NA	False	TTTAAA	-8	NA	7693199	7673549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.80	chr6	-	7077	8	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_3	3053.73502986966	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1565	False	NA	-9	True	AATAAA	-17	NA	7693256	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7681571_7681650_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.81	chr6	-	3054	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	8132	junction_6	326.707652190762	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1552	False	NA	-9	True	AATAAA	-17	NA	7693269	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.82	chr6	-	6393	8	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	3804.16981745032	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1564	False	NA	-9	True	AATAAA	-17	NA	7693257	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681571_7681650_7682457_7685168_7685401_7689251_7689524_7693108
ES.27975.83	chr6	-	5043	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	34	0	intron_retention	FALSE	canonical	3	8132	junction_5	327.038828064388	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	-6	True	NA	-9	True	AATAAA	-17	NA	7693220	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.84	chr6	-	5677	9	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	8132	junction_4	344.380580717032	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1575	False	NA	-9	True	AATAAA	-17	NA	7693246	7675168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.88	chr6	-	4116	9	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	-57	-3	intron_retention	FALSE	canonical	0	0	junction_7	2862.5600184756	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	-6	True	NA	-12	True	AATAAA	-14	NA	7693167	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7678047_7680084_7682036_7682270_7682457_7685168_7685401_7689242_7689524_7693108
ES.27975.89	chr6	-	3720	10	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	27	-3	intron_retention	FALSE	canonical	0	0	junction_6	2719.84005974934	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	-13	True	NA	-12	True	AATAAA	-14	NA	7693227	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681571_7681650_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.90	chr6	-	3511	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	9	-3	intron_retention	FALSE	canonical	3	8132	junction_5	316.596132495505	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	1576	False	NA	-12	True	AATAAA	-14	NA	7693245	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.93	chr6	-	4403	10	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	1186	-3	intron_retention	FALSE	canonical	3	8132	junction_6	343.204974207816	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	3785	False	NA	-12	True	AATAAA	-14	NA	7691036	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251
ES.27975.94	chr6	-	2059	13	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3185.90030337667	3655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	5	True	NA	-12	True	AATAAA	-14	NA	7693209	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7685910_7686017_7689251_7689524_7693108
ES.27975.96	chr6	-	2188	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	45	-3	intron_retention	FALSE	canonical	3	8132	junction_7	324.444078386399	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	5	True	NA	-12	True	AATAAA	-14	NA	7693209	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
ES.27975.97	chr6	-	5132	8	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	2730	-3	intron_retention	FALSE	canonical	3	8132	junction_5	355.333531161002	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	5329	False	NA	-12	True	AATAAA	-14	NA	7689492	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7681378_7681933_7682457_7685168_7685407_7689251
ES.27975.98	chr6	-	6899	5	NNC	ENSMUSG00000029752.13	novel	448	4	NA	NA	-1260	-3	intron_retention	FALSE	canonical	0	0	junction_4	3690.11587724559	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTCCTGGTTGTGGG	9596	False	NA	-12	True	AATAAA	-14	NA	7683618	7675171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7681571_7681650
ES.27976.1	chr6	+	6294	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-198	-4	-198	4	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTATTTTTTTT	-12	True	NA	20	True	AATAAA	-21	NA	7844643	7875691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.10	chr6	+	3551	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-63	-25766	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGTGTATTCCTC	-6	True	NA	NA	False	NA	NA	NA	7844778	7849921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986
ES.27976.11	chr6	+	5000	5	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-55	-1659	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	63.0357041683521	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTCTGTGCATCATTG	2	True	NA	NA	False	AATAAA	-15	NA	7844786	7874028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986_7847499_7863904_7864142_7866375_7867044_7871053
ES.27976.12	chr6	+	1914	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-44	4222	-44	-4222	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTGTGTTTTTAAAT	13	True	NA	NA	False	NA	NA	NA	7844797	7871465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.14	chr6	+	829	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-32	-28457	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTTTGCTATGTTAG	-23	True	NA	NA	False	AATATA	-24	NA	7844809	7847230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986
ES.27976.15	chr6	+	2984	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-23	-26293	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGGAAAAGTAGAAACCT	-14	True	NA	NA	False	GATAAA	-18	NA	7844818	7849394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986
ES.27976.16	chr6	+	3722	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-20	-25552	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTTTTCTCCTAG	-11	True	NA	NA	False	CATAAA	-8	NA	7844821	7850135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986
ES.27976.17	chr6	+	6617	5	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	63.0357041683521	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCATCTGTGTATTT	-5	True	NA	15	True	AATAAA	-16	NA	7844827	7875686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986_7847499_7863904_7864142_7866375_7867044_7871053
ES.27976.18	chr6	+	2400	1	Genic_Genomic	ENSMUSG00000042460.6	novel	NA	NA	NA	NA	-11	-28457	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTTTGCTATGTTAG	-2	True	NA	NA	False	AATATA	-24	NA	7844830	7847230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_7844800_7847200
ES.27976.19	chr6	+	5993	5	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	55.5877684387492	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATCTGTGTATTTTTT	0	True	NA	18	True	AATAAA	-19	NA	7844832	7875689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053_7873638_7873747
ES.27976.2	chr6	+	5193	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-164	1063	-164	-1063	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCGTGAGGGAGGT	22	False	NA	NA	False	AATAAA	-16	NA	7844677	7874624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.20	chr6	+	3664	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	494	1934	494	-1934	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGGAGCTTGTGCT	12	False	NA	NA	False	ATTAAA	-15	NA	7845335	7873753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.21	chr6	+	2163	1	Intergenic	novelGene_23259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTTGTTTTTT	1728	False	NA	NA	False	NA	NA	NA	7848707	7850870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_7848700_7850900
ES.27976.22	chr6	+	7222	3	ISM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	13740	3640	13740	-3640	3prime_fragment	FALSE	canonical	3	128	junction_1	3	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTATTTGGTACCT	NA	False	NA	9	True	ATTAAA	-22	NA	7858581	7872047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_7864142_7866375_7867044_7871053
ES.27976.23	chr6	+	4526	3	ISM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	18989	1087	18989	-1087	3prime_fragment	FALSE	canonical	3	128	junction_1	3	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATCATTGACTAC	NA	False	NA	NA	False	TATAAA	-8	NA	7863830	7874600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_7864142_7866375_7867044_7871053
ES.27976.3	chr6	+	4598	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-162	1656	-162	-1656	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTGCATCATTGGTT	24	False	NA	NA	False	AATAAA	-18	NA	7844679	7874031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.4	chr6	+	3056	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-110	3146	-110	-3146	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTATATTTCATTAT	76	False	NA	NA	False	CATAAA	-17	NA	7844731	7872541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.5	chr6	+	5072	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	-102	-24284	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTACTCATTAATTTT	84	False	NA	NA	False	NA	NA	NA	7844739	7851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_7845395_7846986
ES.27976.6	chr6	+	4675	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-73	1490	-73	-1490	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCATGAAAATTTCCAC	-16	True	NA	NA	False	AATAAA	-14	NA	7844768	7874197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.7	chr6	+	3228	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-73	2937	-73	-2937	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGTTTAGGTTCTTAC	-16	True	NA	NA	False	AATACA	-20	NA	7844768	7872750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.8	chr6	+	2518	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-66	3640	-66	-3640	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTATTTGGTACCT	-9	True	NA	9	True	ATTAAA	-22	NA	7844775	7872047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27976.9	chr6	+	4951	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-64	1205	-64	-1205	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTGTTTTTCTACT	-7	True	NA	NA	False	AATAAA	-20	NA	7844777	7874482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ES.27977.1	chr6	-	4789	1	Intergenic	novelGene_23258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGCAGCTGAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	7851750	7846961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_7847000_7851800
ES.27978.1	chr6	-	1636	1	FSM	ENSMUSG00000096403.3	ENSMUST00000178598.3	843	1	-55	-738	-55	738	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGAGGCCTTTGTGTGG	-4	True	NA	NA	False	AATAAA	-43	NA	7983438	7981802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_7981800_7983400
ES.27978.2	chr6	-	1444	2	Genic_Genomic	ENSMUSG00000096403.3	novel	843	1	NA	NA	-46	711	multi-exon	FALSE	non_canonical	0	0	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	5	True	NA	NA	False	AATAAA	-16	NA	7983429	7981829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_7983229_7983384
ES.27979.1	chr6	+	4666	1	Genic_Genomic	ENSMUSG00000042447.14	novel	NA	NA	NA	NA	-114	-22495	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTGGTTTTAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	8209107	8213773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_8209100_8213800
ES.27979.10	chr6	+	3767	13	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-19	-26	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	115.023065319768	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAATAAATAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	8209202	8236242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8210230_8210301_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.11	chr6	+	4437	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-13	713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.782603812611	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTAGGGTATTTTTCTTT	NA	False	NA	NA	False	TATAAA	-17	NA	8209208	8236987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216370_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.12	chr6	+	4442	4	ISM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	0	17044	0	-17038	5prime_fragment	FALSE	canonical	3	301	junction_3	13.9602610609146	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAATATTTGCCTAG	-18	True	NA	NA	False	NA	NA	NA	8209221	8219230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371
ES.27979.13	chr6	+	3675	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	3	32	3	-26	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAATAAATAAAAAAAATT	-15	True	NA	NA	False	NA	NA	NA	8209224	8236242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.15	chr6	+	2562	9	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	5	349	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	104.608496308856	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTGTTCCATTTT	-13	True	NA	NA	False	NA	NA	NA	8209226	8236623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.16	chr6	+	839	1	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	6	-26202	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATAAAAACTTT	-12	True	NA	NA	False	NA	NA	NA	8209227	8210066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209200_8210100
ES.27979.18	chr6	+	3079	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	11	-668	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	91.4050109843976	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAATGTGATGTTTGAG	-7	True	NA	11	True	AATAAA	-14	NA	8209232	8235600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233309_8234231_8234362_8235384
ES.27979.19	chr6	+	2973	11	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	11	-661	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	93.3554497605791	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTTGAGTGACTTT	-7	True	NA	18	True	AATAAA	-21	NA	8209232	8235607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.2	chr6	+	4172	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	-110	-352	-110	352	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	8209111	8236626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.20	chr6	+	3747	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	91.4050109843976	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAACTTTGAAACTTTTT	-7	True	NA	NA	False	AATAAA	-18	NA	8209232	8236268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233309_8234231_8234362_8235384
ES.27979.22	chr6	+	2806	10	ISM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	12	2892	12	-2886	5prime_fragment	FALSE	canonical	3	253	junction_5	30.0037034751082	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACACATTTATATT	-6	True	NA	NA	False	ATTAAA	-17	NA	8209233	8233382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049
ES.27979.24	chr6	+	3067	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	14	-668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.061421471066	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAATGTGATGTTTGAG	-4	True	NA	11	True	AATAAA	-14	NA	8209235	8235600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222469_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233309_8234231_8234362_8235384
ES.27979.26	chr6	+	3261	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	15	434	15	-428	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATTCATTGTTTCATA	-3	True	NA	NA	False	GATAAA	-24	NA	8209236	8235840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.27	chr6	+	3286	11	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	24	-666	intron_retention	FALSE	canonical	3	253	junction_4	32.5958586326545	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGTGATGTTTGAGTG	6	True	NA	13	True	AATAAA	-16	NA	8209245	8235602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8211579_8211639_8214765_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.28	chr6	+	3323	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	24	-666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	122.352897002722	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGTGATGTTTGAGTG	6	True	NA	13	True	AATAAA	-16	NA	8209245	8235602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216099_8216368_8216471_8222153_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.3	chr6	+	3895	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	-108	-77	-108	77	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTCTTTACAGTGTGC	NA	False	NA	NA	False	AAAACA	-24	NA	8209113	8236351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.30	chr6	+	3379	11	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	34	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	124.985439151927	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGCAGACAATAAATAAAAAA	16	True	NA	NA	False	NA	NA	NA	8209255	8236238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235390
ES.27979.31	chr6	+	4660	13	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	34	1647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	89.0912453611465	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTATTGTCAGTGCC	16	True	NA	NA	False	ATTAAA	-23	NA	8209255	8237921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8237068_8237730
ES.27979.32	chr6	+	9975	1	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	34	-17038	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAATATTTGCCTAG	16	True	NA	NA	False	NA	NA	NA	8209255	8219230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209300_8219200
ES.27979.33	chr6	+	3699	13	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	34	27954	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	117.172563862972	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAAAGATTCTGCCTC	16	True	NA	NA	False	NA	NA	NA	8209255	8264228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216368_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8236259_8264192
ES.27979.34	chr6	+	3421	11	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	96.1561230499649	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAAACTTTTTTCTTTT	16	True	NA	NA	False	AATAAA	-24	NA	8209255	8236274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.38	chr6	+	2642	10	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	82	-666	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	129.408054016914	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGTGATGTTTGAGTG	-17	True	NA	13	True	AATAAA	-16	NA	8209303	8235602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8214765_8216100_8216371_8216471_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.39	chr6	+	7757	2	ISM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	84	17044	84	-17038	intron_retention	FALSE	canonical	3	332	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAATATTTGCCTAG	-15	True	NA	NA	False	NA	NA	NA	8209305	8219230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_8209412_8211579
ES.27979.40	chr6	+	3537	11	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	122.093447817645	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAAACTTTTTTCTTTT	14	True	NA	NA	False	AATAAA	-24	NA	8209334	8236274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8214765_8216097_8216369_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.41	chr6	+	4113	11	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	131	-437	intron_retention	FALSE	canonical	3	253	junction_5	32.2682506498261	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATGCCAATTCAT	32	False	NA	NA	False	GATAAA	-15	NA	8209352	8235831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8234362_8235384
ES.27979.42	chr6	+	4576	3	ISM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	138	17044	138	-17038	intron_retention	FALSE	canonical	3	329	junction_2	1.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAATATTTGCCTAG	39	False	NA	NA	False	NA	NA	NA	8209359	8219230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_8209412_8211579_8211639_8214765
ES.27979.43	chr6	+	3846	11	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	152	347	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	93.3554497605791	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTGTTTGTTCCATT	53	False	NA	NA	False	NA	NA	NA	8209373	8236621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8209412_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.44	chr6	+	5011	11	ISM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	193	674	193	-668	3prime_fragment	FALSE	canonical	3	253	junction_4	31.2409987036266	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAATGTGATGTTTGAG	94	False	NA	11	True	AATAAA	-14	NA	8209414	8235600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.45	chr6	+	1034	8	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	208	27954	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	144.384831585027	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAAAGATTCTGCCTC	9458	False	NA	NA	False	NA	NA	NA	8226842	8264228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8235609_8237772_8237832_8264191
ES.27979.46	chr6	+	4592	5	NIC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	253	0	intron_retention	FALSE	canonical	3	271	junction_1	28.1369419091699	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAAACTTTTTTCTTTT	9503	False	NA	NA	False	AATAAA	-24	NA	8226887	8236274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8226910_8227968_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.47	chr6	+	3093	6	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	1389	2276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	131.687508898908	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTCCAGACTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	8228023	8238550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8237065_8237729
ES.27979.48	chr6	+	179	1	Intergenic	novelGene_23260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	8243663	8243842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_8243700_8243800
ES.27979.49	chr6	+	3857	4	NNC	ENSMUSG00000089862.9	novel	2025	4	NA	NA	-30	10293	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	12.9700509722291	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTGTTTTGAGACTTT	16	False	NA	NA	False	AATATA	-13	NA	8259319	8289845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8259494_8270472_8270582_8284664_8284843_8286449
ES.27979.5	chr6	+	3151	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	-108	667	-108	-661	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTTGAGTGACTTT	NA	False	NA	18	True	AATAAA	-21	NA	8209113	8235607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ES.27979.50	chr6	+	2103	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	-75	-3	5	-1	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTTCATTGCATT	20	False	NA	NA	False	AATAAA	-25	NA	8259354	8428763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
ES.27979.51	chr6	+	3995	5	NNC	ENSMUSG00000089862.9	novel	2615	5	NA	NA	9	10296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.3161479367536	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTTTGAGACTTTCTA	24	False	NA	NA	False	AATATA	-16	NA	8259358	8289848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8259494_8270472_8270582_8283220_8283395_8284664_8284843_8286449
ES.27979.52	chr6	+	1697	4	NNC	ENSMUSG00000089862.9	novel	2025	4	NA	NA	-7	5003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.9124245031395	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGACACCTCTTTC	2	True	NA	NA	False	ATTAAA	-17	NA	8259374	8284555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8259494_8270472_8270582_8280238_8280373_8283220
ES.27979.53	chr6	+	7229	10	NIC	ENSMUSG00000107705.2	novel	5842	11	NA	NA	-75	68	intron_retention	FALSE	canonical	0	0	junction_4	11.0955446513955	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTACATGTGTTTTTAA	2	True	NA	NA	False	AATAAA	-20	NA	8259374	8597548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970_8427186_8537816_8537969_8558499_8558587_8573181_8573299_8579586_8579740_8582579_8582791_8591544
ES.27979.54	chr6	+	1128	6	NNC	ENSMUSG00000089862.9	novel	2615	5	NA	NA	10	10292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.6516093309036	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACTGTTTTGAGACTT	-28	True	NA	NA	False	AATATA	-12	NA	8259391	8289844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8259494_8270472_8270582_8283220_8283395_8284664_8284843_8286558_8286651_8289371
ES.27979.55	chr6	+	2097	5	FSM	ENSMUSG00000089862.9	ENSMUST00000160705.8	624	5	9	-1482	7	1	multi-exon	FALSE	canonical	0	0	junction_3	12.6169528809455	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGGCTTTCATTGCA	17	True	NA	NA	False	AATAAA	-23	NA	8259436	8428761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8401076_8401155_8426970
ES.27979.56	chr6	+	177	1	Intergenic	novelGene_23262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAACAAAACAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	8449931	8450108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_8449900_8450100
ES.27979.57	chr6	+	2555	8	NIC	ENSMUSG00000029638.18	novel	6200	8	NA	NA	-208	71	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.9623487647611	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAATGG	-21	True	NA	NA	False	AATACA	-8	NA	8509391	8593692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_8510320_8537816_8537969_8558499_8558587_8573181_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
ES.27979.58	chr6	+	3031	8	FSM	ENSMUSG00000029638.18	ENSMUST00000064285.15	6200	8	-206	3375	-206	102	multi-exon	FALSE	canonical	0	0	junction_4	3.04389653609465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATTGCGTGTGACGAAA	-19	True	NA	NA	False	AATAAA	-28	NA	8509393	8594173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8510320_8537816_8537969_8558499_8558587_8573184_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
ES.27979.59	chr6	+	6393	8	FSM	ENSMUSG00000029638.18	ENSMUST00000064285.15	6200	8	-193	0	-193	0	multi-exon	FALSE	canonical	0	0	junction_4	3.04389653609465	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTACATGTGTTTTTAA	-6	True	NA	NA	False	AATAAA	-20	NA	8509406	8597548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_8510320_8537816_8537969_8558499_8558587_8573184_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
ES.27979.6	chr6	+	4222	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-108	350	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	91.4050109843976	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTCCATTTTG	NA	False	NA	NA	False	NA	NA	NA	8209113	8236624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233309_8234231_8234362_8235384
ES.27979.61	chr6	+	1783	1	Intergenic	novelGene_23263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGACAGTCTTTTT	3461	False	NA	NA	False	ATTAAA	-14	NA	8513379	8515162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_8513400_8515200
ES.27979.7	chr6	+	3854	14	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-56	59750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	113.287558919403	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACTTGTTTTAACTTG	NA	False	NA	NA	False	AAGAAA	-1	NA	8209165	8296024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8236275_8264177_8264240_8295998
ES.27979.8	chr6	+	5487	13	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-25	2371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	89.0912453611465	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTAGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	8209196	8238645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8237060_8237678
ES.27979.9	chr6	+	4974	12	NNC	ENSMUSG00000042447.14	novel	3710	12	NA	NA	-24	1630	intron_retention	FALSE	non_canonical	0	0	junction_11	92.782603812611	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATGTTATTGAGAATAA	NA	False	NA	NA	False	ATTAAA	-6	NA	8209197	8237904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_8209412_8211579_8211639_8214765_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384_8237073_8237734
ES.2798.1	chr10	+	3241	1	Antisense	novelGene_ENSMUSG00000019877.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCTTCAACAAATGATGA	NA	False	NA	NA	False	NA	NA	NA	57395214	57398455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_57395200_57398500
ES.27980.1	chr6	-	580	4	NNC	ENSMUSG00000012483.5	novel	670	4	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	677.807412831174	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTGGTCAATTGTTT	-22	True	NA	-12	True	AATAAA	-13	NA	8259147	8255936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_8256185_8256694_8256804_8257686_8257762_8258999
ES.27980.2	chr6	-	672	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	-3	1	-3	-1	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTGGTCAATTGTTT	NA	False	NA	-12	True	AATAAA	-13	NA	8259176	8255936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
ES.27980.3	chr6	-	3222	1	NIC	ENSMUSG00000012483.5	novel	670	4	NA	NA	15	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTGGTCAATTGTTT	NA	False	NA	-12	True	AATAAA	-13	NA	8259158	8255936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_8255900_8259200
ES.27980.4	chr6	-	1917	2	FSM	ENSMUSG00000012483.5	ENSMUST00000159594.2	682	2	28	-1263	28	-22	multi-exon	FALSE	canonical	3	1539	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAATCAAAATAT	13	True	NA	-33	True	TATAAA	-36	NA	8259112	8255957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_8257762_8258999
ES.27981.1	chr6	-	3285	1	Intergenic	novelGene_23261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGCAAGGACACAA	NA	False	NA	NA	False	TATAAA	-25	NA	8407812	8404527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_8404500_8407800
ES.27982.1	chr6	+	4198	4	Antisense	novelGene_ENSMUSG00000062995.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCCTTAAATCTCTTTAT	NA	False	NA	NA	False	AAGAAA	-13	NA	8657752	8724239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_8658333_8660808_8660897_8719192_8721304_8722820
ES.27983.1	chr6	-	1952	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	124	-1	79	1	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCACTCCTGTTTGGTT	184	False	NA	0	True	AATAAA	-36	NA	8778360	8630525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ES.27983.2	chr6	-	1879	13	NIC	ENSMUSG00000062995.13	novel	2075	14	NA	NA	79	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.4071865268742	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCTATAGTTATTCACTC	184	False	NA	-10	True	AATAAA	-26	NA	8778360	8630535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_8630798_8643972_8644243_8653496_8653536_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ES.27984.1	chr6	-	183	1	Intergenic	novelGene_23264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATGTGCTCAATAGGTG	NA	False	NA	NA	False	NA	NA	NA	8880764	8880581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_8880600_8880800
ES.27985.1	chr6	+	201	1	Intergenic	novelGene_23265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	10709260	10709461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_10709300_10709500
ES.27986.1	chr6	+	156	1	Intergenic	novelGene_23266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTATAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	10771729	10771885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_10771700_10771900
ES.27987.1	chr6	+	150	1	Intergenic	novelGene_23267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	11263438	11263588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_11263400_11263600
ES.27988.1	chr6	+	178	1	Intergenic	novelGene_23268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAATTTATTATT	NA	False	NA	NA	False	NA	NA	NA	11286351	11286529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_11286400_11286500
ES.27989.1	chr6	-	157	1	Intergenic	novelGene_23269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	11800937	11800780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_11800800_11800900
ES.2799.1	chr10	-	3617	1	Antisense	novelGene_ENSMUSG00000019878.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57374504	57370887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_57370900_57374500
ES.27990.1	chr6	-	1484	1	Intergenic	novelGene_23270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	11824391	11822907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_11822900_11824400
ES.27991.1	chr6	-	555	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	-14	69	0	11	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGCTGAAAATTCAT	NA	False	NA	0	True	AATAAA	-26	NA	11907496	11900359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ES.27991.2	chr6	-	474	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204084.3	409	4	-66	1	-9	0	multi-exon	FALSE	canonical	3	31	junction_3	4235.12888430407	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTGTCACTATTTAATG	-7	True	NA	-12	True	AATAAA	-14	NA	11907458	11900371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_11900591_11905200_11905262_11906018_11906077_11907322
ES.27991.3	chr6	-	1722	3	ISM	ENSMUSG00000029632.8	ENSMUST00000031637.8	468	4	-11	0	-11	0	intron_retention	FALSE	canonical	3	8511	junction_2	467.5	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTGTCACTATTTAATG	-9	True	NA	-12	True	AATAAA	-14	NA	11907460	11900371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_11900591_11905200_11905262_11906018
ES.27992.1	chr6	+	3231	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-65	-2	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAAATTCATATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	11907742	12081202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ES.27992.10	chr6	+	2540	15	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	29	-411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	55.3811008064178	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGGCCTAGATAGAG	-27	True	NA	3	True	AATAAA	-9	NA	11907836	12007601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11908017_11926725_11926837_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990128_11991981_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.11	chr6	+	3217	19	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	51.733290377989	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	-22	True	NA	5	True	AATAAA	-16	NA	11907841	12081197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12067189_12067280_12080995
ES.27992.12	chr6	+	2316	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-36	-28	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	50.3359381224455	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAATAAAAAAATGAT	-17	True	NA	NA	False	AATAAA	-42	NA	11907846	12007984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ES.27992.13	chr6	+	2312	9	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-35	-1089	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	29.9476105056814	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATAGAGAGAAATATG	-16	True	NA	NA	False	AGTAAA	-14	NA	11907847	11987565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002
ES.27992.14	chr6	+	2999	17	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-32	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	43.6555677290996	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTATTTGAAATTCAT	-13	True	NA	4	True	AATAAA	-15	NA	11907850	12081196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12080995
ES.27992.15	chr6	+	3222	19	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.1023446784082	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTATTTGAAATTCAT	-6	True	NA	4	True	AATAAA	-15	NA	11907857	12081196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11959927_11960040_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ES.27992.16	chr6	+	2937	17	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	50.0015234142921	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATTTGTATTGTATGA	9	True	NA	NA	False	AATAAA	-13	NA	11907872	12008008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987130_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ES.27992.17	chr6	+	3617	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	-95	463	-61	-395	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTATTTTTTGTTTGG	NA	False	NA	19	True	AATAAA	-25	NA	11925818	12007617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.19	chr6	+	3397	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	-68	7	-33	0	multi-exon	FALSE	canonical	3	71	junction_1	28.335117658721	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	NA	False	NA	5	True	AATAAA	-16	NA	11925846	12081197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ES.27992.2	chr6	+	3383	8	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-65	-9037	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	54.4400062978898	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTGCCTTGTTGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	11907742	11977420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11975744
ES.27992.20	chr6	+	3362	17	FSM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	-9	0	-9	0	multi-exon	FALSE	canonical	3	33	junction_16	37.0717210282986	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTGTATGATTTA	-35	True	NA	NA	False	AATAAA	-17	NA	11925870	12008012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ES.27992.21	chr6	+	3525	8	NNC	ENSMUSG00000029629.18	novel	3985	16	NA	NA	-6	-9039	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	53.9625720631761	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTCCTGCCTTGTTGC	-32	True	NA	NA	False	AATAAA	-22	NA	11925873	11977418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11975744
ES.27992.22	chr6	+	4015	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	-39	9	-5	-9	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAATATAACTTCTGTT	-31	True	NA	NA	False	ATTAAA	-23	NA	11925874	12008071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.26	chr6	+	3291	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	-7	701	-7	-633	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGATTCTGCCGAAATAT	1	True	NA	NA	False	AATAAA	-17	NA	11925906	12007379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.27	chr6	+	3308	17	NNC	ENSMUSG00000029629.18	novel	3353	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.5876709352792	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGTATTGTATGATT	6	True	NA	NA	False	AATAAA	-15	NA	11925911	12008010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953445_11961554_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006858_12006983_12007106_12007703
ES.27992.28	chr6	+	3621	17	NNC	ENSMUSG00000029629.18	novel	3336	18	NA	NA	0	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.9918027279076	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGGCCTAGATAGAG	9	True	NA	3	True	AATAAA	-9	NA	11925914	12007601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11959927_11960040_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990136_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.29	chr6	+	2313	3	ISM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	47	72924	12	1679	5prime_fragment	FALSE	canonical	3	71	junction_1	42	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGATTAATTCCTAG	21	True	NA	NA	False	ATTAAA	-19	NA	11925926	11935088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_11926292_11926725_11926837_11933251
ES.27992.3	chr6	+	3408	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-48	-388	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	26.8104457255004	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGTTTGGTTTCCTT	-13	True	NA	26	True	AATAAA	-32	NA	11907759	12007624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.30	chr6	+	5769	17	FSM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	71	-2487	36	2419	multi-exon	FALSE	canonical	3	33	junction_16	37.0717210282986	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTCTTTTTTATTTAA	45	False	NA	NA	False	AATAAA	-13	NA	11925950	12010499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ES.27992.31	chr6	+	3634	16	NNC	ENSMUSG00000029629.18	novel	727	6	NA	NA	414	-28	intron_retention	FALSE	canonical	0	0	junction_1	41.1693521391284	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAATAAAAAAATGAT	167	False	NA	NA	False	AATAAA	-42	NA	11926328	12007984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_11926452_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.32	chr6	+	2315	1	Intergenic	novelGene_23272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	11999890	12002205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_11999900_12002200
ES.27992.4	chr6	+	3260	17	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-48	-6	combination_of_known_junctions	FALSE	canonical	3	33	junction_16	37.5349836818934	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATAACTTCTGTTTGT	-13	True	NA	NA	False	ATTAAA	-26	NA	11907759	12008074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ES.27992.6	chr6	+	3441	9	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	67	junction_1	29.9476105056814	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATTCTTGTTTATTTA	34	False	NA	NA	False	AATAAA	-14	NA	11907806	11988653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002
ES.27992.7	chr6	+	3637	15	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	1	-411	intron_retention	FALSE	canonical	3	67	junction_1	25.9028798335913	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATGGCCTAGATAGAG	36	False	NA	3	True	AATAAA	-9	NA	11907808	12007601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27992.8	chr6	+	3732	16	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	14	-2	intron_retention	FALSE	canonical	3	67	junction_1	26.8104457255004	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGTATTGTATGATT	49	False	NA	NA	False	AATAAA	-15	NA	11907821	12008010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ES.27993.1	chr6	-	2713	2	Antisense	novelGene_ENSMUSG00000029629.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATAGCATTGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	11937955	11935158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_11935671_11935754
ES.27993.2	chr6	-	196	1	Intergenic	novelGene_23271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTCAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	11937616	11937420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_11937400_11937600
ES.27994.1	chr6	-	4112	24	NNC	ENSMUSG00000032625.15	novel	10998	28	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.47313689966065	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATGGACTCATTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	12555121	12320798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_12321117_12321887_12321971_12324595_12324692_12327492_12327667_12330936_12331112_12331543_12331690_12331927_12332046_12337250_12337367_12338579_12338725_12343111_12343266_12348195_12348334_12351983_12352163_12379391_12379656_12381219_12381415_12396554_12396659_12397837_12397971_12405107_12405224_12408801_12409037_12418243_12418439_12468787_12469001_12471040_12471197_12500985_12501168_12503914_12504164_12554893
ES.27994.2	chr6	-	4620	13	ISM	ENSMUSG00000032625.15	ENSMUST00000119581.7	5678	28	222	60952	65	-57237	5prime_fragment	FALSE	canonical	0	0	junction_5	1.65621724286265	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGACTGCGTTATTTGT	0	True	NA	NA	False	TTTAAA	-10	NA	12749187	12378037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_12379656_12381219_12381415_12396554_12396659_12397837_12397971_12405107_12405224_12408801_12409037_12418243_12418439_12468787_12469001_12471040_12471197_12500985_12501168_12503914_12504164_12554893_12555726_12748795
ES.27995.1	chr6	+	206	1	Intergenic	novelGene_23273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAGTCACTCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	12831371	12831577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_12831400_12831600
ES.27996.1	chr6	+	6088	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-86	0	-6	0	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTCATCCTCTTGAAA	-1	True	NA	18	True	AATAAA	-19	NA	13069751	13089268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.10	chr6	+	6032	9	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0925784355847	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGGGTCATCCTC	-18	True	NA	12	True	AATAAA	-13	NA	13069794	13089262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13069960_13070313_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.11	chr6	+	6228	9	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.7456537233097	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTCATCCTCTTGAAA	-18	True	NA	18	True	AATAAA	-19	NA	13069794	13089268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13070143_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.12	chr6	+	4469	8	NIC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	-15	-1918	intron_retention	FALSE	canonical	3	105	junction_4	6.34066886319204	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGGTGTGAATTAT	-13	True	NA	NA	False	AATAAA	-11	NA	13069799	13087350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.13	chr6	+	5548	11	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	45.1686838417946	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTGGGTCATCCTC	4	True	NA	12	True	AATAAA	-13	NA	13069816	13089262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186_13086354_13086603_13088450_13088668
ES.27996.14	chr6	+	1758	9	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	-10	3408	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	37.5233260785874	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGCTTTGATAAAGGTC	15	True	NA	NA	False	AATAAA	-14	NA	13069827	13085059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13069960_13070306_13070414_13071785_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.15	chr6	+	6036	9	NIC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	36.4398048156134	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTATTTGGGTCATC	25	True	NA	9	True	AATAAA	-43	NA	13069837	13089259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_13070003_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.16	chr6	+	4931	8	NIC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	44	-1918	intron_retention	FALSE	canonical	3	91	junction_1	9.81876587282262	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTTGGTGTGAATTAT	9	False	NA	NA	False	AATAAA	-11	NA	13069896	13087350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13083422_13084186
ES.27996.17	chr6	+	176	1	Intergenic	novelGene_23274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAATTAA	3474	False	NA	NA	False	NA	NA	NA	13073361	13073537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_13073400_13073500
ES.27996.18	chr6	+	3280	1	NIC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	13824	-1915	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTGTGAATTATTTA	NA	False	NA	NA	False	AATAAA	-14	NA	13084073	13087353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_13084100_13087400
ES.27996.2	chr6	+	1883	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-86	4205	-6	3412	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTTGATAAAGGTCAAAT	-1	True	NA	NA	False	AATAAA	-18	NA	13069751	13085063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.3	chr6	+	4409	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-85	1678	-5	-1678	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGATCTTATAATT	0	True	NA	NA	False	ATTAAA	-16	NA	13069752	13087590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.4	chr6	+	4176	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-78	1904	2	-1904	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATTTATAAGTAAGATT	-53	True	NA	NA	False	AATAAA	-25	NA	13069759	13087364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.6	chr6	+	4153	9	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	6	-1916	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0925784355847	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTGTGAATTATTT	-49	True	NA	NA	False	AATAAA	-13	NA	13069763	13087352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13069960_13070313_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.8	chr6	+	1841	9	NNC	ENSMUSG00000029571.15	novel	6002	9	NA	NA	25	3408	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.0925784355847	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGCTTTGATAAAGGTC	-30	True	NA	NA	False	AATAAA	-14	NA	13069782	13085059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13069960_13070313_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27996.9	chr6	+	2199	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	-52	3855	28	3762	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTCGATGCTTCTAG	-27	True	NA	NA	False	AATAAA	-40	NA	13069785	13085413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ES.27997.1	chr6	-	4536	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	53	-2	-3	2	multi-exon	TRUE	canonical	3	155	junction_4	32.9194091684526	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTCTCAGACTCAGCT	-16	True	NA	NA	False	AATAAA	-28	NA	13608046	13580683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ES.27997.10	chr6	-	4569	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	3	-607	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	106.245653505868	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	7	True	NA	NA	False	ATTAAA	-19	NA	13608023	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607415_13607828
ES.27997.11	chr6	-	4405	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-6	-607	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	105.671945188872	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-2	True	NA	NA	False	ATTAAA	-19	NA	13608032	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13606922_13607415_13607828
ES.27997.12	chr6	-	4057	7	NNC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	2	-607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	107.426977782844	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	6	True	NA	NA	False	ATTAAA	-19	NA	13608024	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605879_13607024_13607084_13607828
ES.27997.13	chr6	-	8237	4	ISM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	85	607	4	-607	intron_retention	FALSE	canonical	3	188	junction_3	21.2759645296439	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	16	True	NA	NA	False	ATTAAA	-19	NA	13608014	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236
ES.27997.14	chr6	-	4252	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	6	-607	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	106.573527044321	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-7	True	NA	NA	False	ATTAAA	-19	NA	13608037	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607084_13607828
ES.27997.15	chr6	-	4097	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	0	-607	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	105.174901949087	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-13	True	NA	NA	False	ATTAAA	-19	NA	13608043	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13607828
ES.27997.16	chr6	-	5543	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-7	-607	intron_retention	FALSE	canonical	2	9	junction_4	103.706508956767	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-3	True	NA	NA	False	ATTAAA	-19	NA	13608033	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13607415_13607828
ES.27997.18	chr6	-	3717	6	NNC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-6	-607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.0915791468596	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-2	True	NA	NA	False	ATTAAA	-19	NA	13608032	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13602701_13602896_13603487_13607828
ES.27997.19	chr6	-	4720	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	2	-611	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	107.582139161976	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTTTGCTTTTAGA	14	True	NA	NA	False	ATTAAA	-15	NA	13608016	13581296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607577_13607828
ES.27997.2	chr6	-	5162	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	3	-14	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	106.245653505868	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTGAGACCCACATTG	7	True	NA	NA	False	AATAAA	-12	NA	13608023	13580699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607415_13607828
ES.27997.20	chr6	-	3960	5	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-7	-611	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	96.1782199876874	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTTTGCTTTTAGA	276	False	NA	NA	False	ATTAAA	-15	NA	13607754	13581296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607499
ES.27997.21	chr6	-	7307	4	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-7	-613	intron_retention	FALSE	canonical	3	155	junction_3	32.8261413442938	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGCCTTTGCTTTTA	-3	True	NA	NA	False	ATTAAA	-13	NA	13608033	13581298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13595086_13602236_13603487_13607828
ES.27997.22	chr6	-	3243	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	66	1278	-7	-1278	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGATTCTTCCTGTCTTAC	-3	True	NA	NA	False	AATAAA	-19	NA	13608033	13581963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ES.27997.24	chr6	-	1988	1	Intergenic	novelGene_23275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTACTATGCAACCATG	9243	False	NA	NA	False	NA	NA	NA	13598787	13596799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_13596800_13598800
ES.27997.3	chr6	-	3609	6	NNC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-4	-421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.0915791468596	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTGCATCTTGAAT	8	True	NA	NA	False	AATAAA	-6	NA	13608022	13581106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13602797_13603276_13603487_13607828
ES.27997.4	chr6	-	4097	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	67	423	-6	-423	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTGTGCATCTTGA	-2	True	NA	NA	False	AATAAA	-4	NA	13608032	13581108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ES.27997.5	chr6	-	2851	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	62	424	6	-424	multi-exon	FALSE	canonical	3	13	junction_3	103.721850264167	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTGTGCATCTTG	-7	True	NA	NA	False	AATAAA	-3	NA	13608037	13581109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
ES.27997.6	chr6	-	4257	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	-4	-426	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	105.174901949087	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATTTGTGTGCATCT	8	True	NA	NA	False	AATAAA	-1	NA	13608022	13581111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13607828
ES.27997.7	chr6	-	3956	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	45	586	-11	-586	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTGGCATGTTGATT	NA	False	NA	NA	False	ATTAAA	-40	NA	13608054	13581271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ES.27997.8	chr6	-	4086	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	0	-606	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	106.142545663838	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGCTTTTAGAGTTTA	-13	True	NA	NA	False	ATTAAA	-20	NA	13608043	13581291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13606922_13607084_13607828
ES.27997.9	chr6	-	2669	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	61	607	5	-607	multi-exon	FALSE	canonical	3	13	junction_3	103.721850264167	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-8	True	NA	NA	False	ATTAAA	-19	NA	13608038	13581292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
ES.27998.1	chr6	-	2049	1	Intergenic	novelGene_23276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTAGAACCAGCAGATT	NA	False	NA	NA	False	NA	NA	NA	13623586	13621537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_13621500_13623600
ES.27999.1	chr6	-	981	1	Genic_Genomic	ENSMUSG00000042742.8	novel	NA	NA	NA	NA	51671	386	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATAGTCCCTAGCTTTCT	NA	False	NA	NA	False	AAAACA	-13	NA	13626266	13625285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_13625300_13626300
ES.27999.10	chr6	-	3356	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	119	668	91	474	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTTTTTTTCACTGT	106	False	NA	NA	False	TATAAA	-14	NA	13677846	13626339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.11	chr6	-	3362	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	8	773	8	369	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGAGTTTGCTTTTGGT	-5	True	NA	NA	False	TATAAA	-20	NA	13677957	13626444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.12	chr6	-	3096	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	-93	1140	-93	2	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAATTTTCATTTACTT	NA	False	NA	6	True	AATAAA	-30	NA	13678058	13626811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.13	chr6	-	2901	5	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	308	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.270634389394	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCATAAGTAACTTGAAATT	323	False	NA	-5	True	AATAAA	-19	NA	13677629	13626822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677433
ES.27999.14	chr6	-	2741	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	29	1373	1	-231	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATGTTTTTGTGCT	16	True	NA	NA	False	CATAAA	-21	NA	13677936	13627044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.15	chr6	-	4898	3	ISM	ENSMUSG00000042742.8	ENSMUST00000203078.2	4462	4	-52	10598	-24	-10598	5prime_fragment	FALSE	canonical	3	69	junction_2	0.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGCAACATTAT	NA	False	NA	NA	False	NA	NA	NA	13677989	13637411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_13641857_13663200_13663343_13677678
ES.27999.2	chr6	-	4175	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	-32	0	-32	0	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	NA	False	NA	1	True	ATTAAA	-20	NA	13677997	13625671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.3	chr6	-	4021	5	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	338	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.270634389394	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCTGTTACTTGT	353	False	NA	0	True	ATTAAA	-19	NA	13677599	13625672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677433
ES.27999.4	chr6	-	3429	1	NIC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	48832	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTCTTTGTCTGTTAC	NA	False	NA	-4	True	ATTAAA	-15	NA	13629105	13625676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13625700_13629100
ES.27999.5	chr6	-	3938	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	-17	222	-17	-222	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	13677982	13625893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.6	chr6	-	4189	1	NIC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	47855	-222	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	13630082	13625893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_13625900_13630100
ES.27999.7	chr6	-	3580	5	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	51	-223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.3758259791675	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGGAAGGAAGGAAGGA	66	False	NA	NA	False	NA	NA	NA	13677886	13625894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13628839_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ES.27999.9	chr6	-	3820	5	NNC	ENSMUSG00000042742.8	novel	4143	5	NA	NA	278	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.270634389394	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	293	False	NA	NA	False	NA	NA	NA	13677659	13625933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677433
ES.28.1	chr1	-	3733	1	FSM	ENSMUSG00000033774.5	ENSMUST00000044180.5	3692	1	-44	3	-44	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGTGTATATTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	5987661	5983928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_5983900_5987700
ES.280.1	chr1	+	4197	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	-24	1020	-24	-1020	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGTGTGAAGACTGGTG	NA	False	NA	29	True	NA	NA	NA	36550923	36566298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.10	chr1	+	5173	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	20	0	20	0	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATTGTACTTTTACC	NA	False	NA	NA	False	ATTAAA	-16	NA	36550967	36567318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.12	chr1	+	5946	5	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	23	-7	intron_retention	FALSE	canonical	3	67	junction_1	9.82344135219425	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATTTTCCATTGTAC	NA	False	NA	NA	False	ATTAAA	-9	NA	36550970	36567311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36552235_36558032_36558177_36559158_36559997_36560285_36560921_36564246
ES.280.13	chr1	+	3292	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	31	1870	31	767	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAAACCCAGGTTGGA	NA	False	NA	NA	False	NA	NA	NA	36550978	36565448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.14	chr1	+	4396	8	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	31	-763	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	25.5957585772107	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTGTATTCCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	36550978	36566555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36552235_36558032_36558177_36559161_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.15	chr1	+	1749	2	ISM	ENSMUSG00000001138.14	ENSMUST00000154225.2	559	3	-1198	990	32	-129	5prime_fragment	FALSE	canonical	3	67	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCCACATTA	NA	False	NA	NA	False	NA	NA	NA	36550979	36558526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_36552235_36558032
ES.280.16	chr1	+	3433	2	NNC	ENSMUSG00000001138.14	novel	559	3	NA	NA	32	-3752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	36550979	36554903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36553246_36553736
ES.280.17	chr1	+	3966	7	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	32	-1022	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	34.3870938321665	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGTGTGAAGACTGG	NA	False	NA	27	True	NA	NA	NA	36550979	36566296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36552235_36558032_36558177_36559161_36559309_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.18	chr1	+	3926	1	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	32	-3750	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCGCACA	NA	False	NA	NA	False	NA	NA	NA	36550979	36554905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36551000_36554900
ES.280.19	chr1	+	4238	9	FSM	ENSMUSG00000001138.14	ENSMUST00000097776.4	5292	9	32	1022	32	-1022	multi-exon	FALSE	canonical	1	4	junction_7	33.4680351230842	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACGGTGTGAAGACTGG	NA	False	NA	27	True	NA	NA	NA	36550979	36566296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36563114_36563214_36564246
ES.280.2	chr1	+	4582	8	NNC	ENSMUSG00000001138.14	novel	5292	9	NA	NA	-10	-1008	intron_retention	FALSE	canonical	1	4	junction_6	38.90543217934	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTGTCCGCCTGGGAT	NA	False	NA	41	True	NA	NA	NA	36550937	36566310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36552235_36558032_36558177_36559161_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36563114_36563214_36564246
ES.280.20	chr1	+	5273	9	FSM	ENSMUSG00000001138.14	ENSMUST00000097776.4	5292	9	39	-20	39	20	multi-exon	FALSE	canonical	1	4	junction_7	33.4680351230842	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGTCTCAATTGCCTT	NA	False	NA	NA	False	ATTAAA	-36	NA	36550986	36567338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36563114_36563214_36564246
ES.280.22	chr1	+	3754	8	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	404	-1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.3368945341005	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGTGTGAAGACTGGTG	NA	False	NA	29	True	NA	NA	NA	36551351	36566298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560796_36560921_36564246
ES.280.23	chr1	+	4267	6	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	558	-1021	intron_retention	FALSE	canonical	3	67	junction_1	11.6172285851661	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGGTGTGAAGACTGGT	NA	False	NA	28	True	NA	NA	NA	36551505	36566297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36552235_36558032_36558177_36559158_36559770_36559899_36559997_36560285_36560921_36564246
ES.280.24	chr1	+	4994	6	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	-744	-1021	intron_retention	FALSE	canonical	3	58	junction_1	13.6586968631711	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGGTGTGAAGACTGGT	NA	False	NA	28	True	NA	NA	NA	36556905	36566297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.25	chr1	+	2884	7	ISM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	7083	1024	381	-1024	3prime_fragment	FALSE	canonical	3	58	junction_2	13.271732701079	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATACGGTGTGAAGACT	317	False	NA	25	True	NA	NA	NA	36558030	36566294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.26	chr1	+	3283	5	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	-938	-1025	intron_retention	FALSE	canonical	3	68	junction_4	9.63068014212911	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACGGTGTGAAGAC	1190	False	NA	24	True	NA	NA	NA	36558903	36566293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.27	chr1	+	2870	1	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	3583	-1024	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATACGGTGTGAAGACT	5711	False	NA	25	True	NA	NA	NA	36563424	36566294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36563400_36566300
ES.280.3	chr1	+	4463	7	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	0	-1021	intron_retention	FALSE	canonical	3	67	junction_1	11.3968806648525	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGGTGTGAAGACTGGT	NA	False	NA	28	True	NA	NA	NA	36550947	36566297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36552235_36558032_36558177_36559158_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.5	chr1	+	5006	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	11	176	11	-176	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTGTTTTTCGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	36550958	36567142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.6	chr1	+	5288	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	11	-106	11	106	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGGTCCTAGCTGGTT	NA	False	NA	NA	False	TTTAAA	-4	NA	36550958	36567424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.7	chr1	+	4578	6	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	11	-1025	intron_retention	FALSE	canonical	3	67	junction_1	10.6395488626163	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACGGTGTGAAGAC	NA	False	NA	24	True	NA	NA	NA	36550958	36566293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36552235_36558032_36558177_36559158_36559997_36560285_36560420_36560781_36560921_36564246
ES.280.9	chr1	+	5137	7	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	17	-1021	intron_retention	FALSE	canonical	3	58	junction_2	13.271732701079	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGGTGTGAAGACTGGT	NA	False	NA	28	True	NA	NA	NA	36550964	36566297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36552235_36558032_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ES.2800.1	chr10	-	3404	1	Antisense	novelGene_ENSMUSG00000019878.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57379901	57376497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_57376500_57379900
ES.28000.1	chr6	-	2841	3	NNC	ENSMUSG00000048216.14	novel	3661	4	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTGTGTAGCCTGTTA	-5	True	NA	NA	False	TATAAA	-17	NA	13838675	13834456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_13837073_13837997_13838106_13838558
ES.28001.1	chr6	-	1100	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	11	2066	11	-1	multi-exon	FALSE	canonical	3	64	junction_2	22	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATTGTTTTGGTCTGC	826	False	NA	NA	False	AATACA	-21	NA	13871506	13869799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13870740_13871054_13871146_13871437
ES.28001.2	chr6	-	977	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	29	2171	-23	-46	multi-exon	FALSE	canonical	3	64	junction_2	22	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATACTAAAATAGAGAAAA	844	False	NA	NA	False	AATAAA	-18	NA	13871488	13869904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13870740_13871054_13871146_13871437
ES.28001.3	chr6	-	732	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	52	2393	0	-127	multi-exon	FALSE	canonical	3	64	junction_2	22	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTGCCTCTTGCATTC	0	True	NA	-6	True	AGTAAA	-14	NA	13871465	13870126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_13870740_13871054_13871146_13871437
ES.28002.1	chr6	+	1506	3	NNC	ENSMUSG00000097616.8	novel	1499	3	NA	NA	19	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGATGATAGAATTAATCA	4	True	NA	NA	False	AATAAA	-31	NA	13871543	13896430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_13871627_13881271_13881381_13895116
ES.28002.2	chr6	+	1523	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	-24	0	19	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTTATGGATGATAG	4	True	NA	NA	False	AATAAA	-22	NA	13871543	13896421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13871627_13881271_13881381_13895090
ES.28002.3	chr6	+	1883	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	-18	-366	-18	366	multi-exon	FALSE	canonical	3	16	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATGAAATCATGT	10	True	NA	NA	False	NA	NA	NA	13871549	13896787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_13871627_13881271_13881381_13895090
ES.28003.1	chr6	+	4579	1	Intergenic	novelGene_23277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTGCTGAGTCTAG	NA	False	NA	NA	False	AATAAA	-18	NA	13906214	13910793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_13906200_13910800
ES.28004.1	chr6	-	4581	2	Intergenic	novelGene_23278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	14092048	14085096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_14088467_14090837
ES.28004.2	chr6	-	3757	3	Intergenic	novelGene_23279	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTCTGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	14091280	14085097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_14087669_14087723_14088467_14090837
ES.28005.1	chr6	-	158	1	Intergenic	novelGene_23280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	14419688	14419530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_14419500_14419700
ES.28006.1	chr6	+	4797	19	FSM	ENSMUSG00000029563.17	ENSMUST00000115477.8	6760	19	141	1822	12	-1046	multi-exon	FALSE	canonical	0	0	junction_1	0.229061423645426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAAGTTAGAACAAT	20	True	NA	NA	False	NA	NA	NA	14901488	15440154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_14901761_14988321_14988464_15084480_15084575_15196949_15197128_15286679_15286770_15376687_15376826_15377886_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ES.28006.2	chr6	+	5870	1	NIC	ENSMUSG00000029563.17	novel	6760	19	NA	NA	14	-85156	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGGAACTTTGAA	22	True	NA	NA	False	NA	NA	NA	14901490	14907360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_14901500_14907400
ES.28006.3	chr6	+	162	1	Intergenic	novelGene_23281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATACATTCTATCTT	NA	False	NA	NA	False	NA	NA	NA	15166532	15166694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_15166500_15166700
ES.28006.4	chr6	+	4047	16	NNC	ENSMUSG00000029563.17	novel	5647	17	NA	NA	98	1042	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.249443825784929	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	24	False	NA	NA	False	NA	NA	NA	15197060	15440089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_15197128_15286679_15286770_15376687_15376826_15377952_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ES.28007.1	chr6	+	3908	6	NIC	ENSMUSG00000041390.19	novel	3435	5	NA	NA	-312	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	62.7011961608389	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTAAGATCTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	15720347	15802167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_15720963_15721185_15721364_15731582_15731745_15740986_15741110_15770212_15770492_15799616
ES.28007.10	chr6	+	2095	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	81	1255	21	102	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGCCTTATATTTGGA	40	True	NA	NA	False	ATTAAA	-30	NA	15720740	15800909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ES.28007.11	chr6	+	3384	6	NNC	ENSMUSG00000041390.19	novel	3431	5	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	63.3731804472523	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGACTGTGCTTTAAGA	-1	True	NA	4	True	ATTAAA	-12	NA	15720760	15802160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_15720963_15721185_15721364_15731582_15731641_15740986_15741110_15770212_15770492_15799616
ES.28007.12	chr6	+	3358	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	-128	-1359	-128	2	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCTTTAAGATCTTTT	122	False	NA	10	True	ATTAAA	-18	NA	15720957	15802166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ES.28007.13	chr6	+	3540	3	ISM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	364	-46	-2	46	3prime_fragment	FALSE	canonical	3	115	junction_1	19.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCCTCAAACAAAGAAAC	87	False	NA	NA	False	NA	NA	NA	15721083	15773349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_15721364_15740986_15741110_15770212
ES.28007.14	chr6	+	1971	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	2	-102	2	102	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGCCTTATATTTGGA	91	False	NA	NA	False	ATTAAA	-30	NA	15721087	15800909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ES.28007.15	chr6	+	3650	4	NIC	ENSMUSG00000041390.19	novel	2401	9	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	68.3536555146996	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	91	False	NA	NA	False	NA	NA	NA	15721087	15773301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_15721364_15731582_15731745_15740986_15741110_15770212
ES.28007.16	chr6	+	3579	2	ISM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	374	29008	8	-26053	internal_fragment	FALSE	canonical	3	115	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGCAAAAAAAAAAAAAA	97	False	NA	NA	False	NA	NA	NA	15721093	15744295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_15721364_15740986
ES.28007.17	chr6	+	3199	5	NNC	ENSMUSG00000041390.19	novel	3431	5	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	70.8462243171787	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTGCTTTAAGATCTT	22	True	NA	8	True	ATTAAA	-16	NA	15721172	15802164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_15721364_15731582_15731641_15740986_15741110_15770212_15770492_15799616
ES.28007.18	chr6	+	10954	2	NNC	ENSMUSG00000041390.19	novel	1871	4	NA	NA	72248	8889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGCTACTGTTCCCTG	564	False	NA	NA	False	AATAAA	-15	NA	15800045	15811057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_15804316_15804373
ES.28007.19	chr6	+	3958	2	Intergenic	novelGene_23283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATGGTTCTTGTCTCTC	2995	False	NA	NA	False	AATGAA	-17	NA	15803968	15807989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_15804284_15804346
ES.28007.2	chr6	+	3662	5	FSM	ENSMUSG00000041390.19	ENSMUST00000189359.7	3435	5	-228	1	-228	-1	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTTAAGATCTTTTT	NA	False	NA	11	True	ATTAAA	-19	NA	15720431	15802167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ES.28007.20	chr6	+	6322	1	Intergenic	novelGene_23284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAGAACATTATTTCC	3571	False	NA	NA	False	AATAAA	-17	NA	15804544	15810866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_15804500_15810900
ES.28007.21	chr6	+	2506	1	FSM	ENSMUSG00000108046.2	ENSMUST00000204851.2	1736	1	-973	203	-973	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGCAACTAGAGGTAG	9375	False	NA	NA	False	AATAAA	-15	NA	15810348	15812854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15810300_15812900
ES.28007.3	chr6	+	3717	4	FSM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	-55	-27	5	27	multi-exon	FALSE	canonical	3	76	junction_1	31.8433666561813	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGGAAGAAAAAGAAAAT	-36	True	NA	NA	False	NA	NA	NA	15720664	15773330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212
ES.28007.4	chr6	+	1854	2	ISM	ENSMUSG00000041390.19	ENSMUST00000140516.8	2401	9	-14	48470	-14	-47584	5prime_fragment	FALSE	canonical	3	76	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAAAAAAAAAAATTG	-13	True	NA	NA	False	NA	NA	NA	15720687	15722764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_15720963_15721185
ES.28007.5	chr6	+	2074	1	NIC	ENSMUSG00000041390.19	novel	3431	5	NA	NA	-10	-47583	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAAAAAAAAAAAATTGG	-9	True	NA	NA	False	NA	NA	NA	15720691	15722765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_15720700_15722800
ES.28007.6	chr6	+	3772	3	ISM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	-17	28983	1	-26028	5prime_fragment	FALSE	canonical	3	76	junction_1	19.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTCGAGCTACTTATG	2	True	NA	NA	False	TTTAAA	-23	NA	15720702	15744320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_15720963_15721185_15721364_15740986
ES.28007.7	chr6	+	1997	4	FSM	ENSMUSG00000041390.19	ENSMUST00000125326.8	3635	4	-11	1649	7	420	multi-exon	FALSE	canonical	3	76	junction_1	31.8433666561813	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCAGTGACCCTACTT	8	True	NA	NA	False	AATAAA	-15	NA	15720708	15771654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212
ES.28007.8	chr6	+	4254	5	FSM	ENSMUSG00000041390.19	ENSMUST00000189359.7	3435	5	56	-875	-4	875	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGAGTTTCTATGACC	15	True	NA	NA	False	AAGAAA	-25	NA	15720715	15803043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ES.28007.9	chr6	+	3691	5	NNC	ENSMUSG00000041390.19	novel	3635	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	60.4209193905555	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21	True	NA	NA	False	NA	NA	NA	15720721	15773303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_15720963_15721185_15721364_15731582_15731641_15740986_15741110_15770212
ES.28008.1	chr6	-	160	1	Intergenic	novelGene_23282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	15733788	15733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_15733600_15733800
ES.28009.1	chr6	+	689	4	Intergenic	novelGene_23285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	5.55777733351102	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGGGATACAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	15853128	15884849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_15853247_15874401_15874537_15878053_15878161_15884520
ES.2801.1	chr10	-	2764	1	Antisense	novelGene_ENSMUSG00000019878.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGAAAAAACCAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	57384312	57381548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_57381500_57384300
ES.28010.1	chr6	-	307	1	Intergenic	novelGene_23286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATAGAAATGCCTTT	NA	False	NA	NA	False	AAGAAA	-11	NA	15983640	15983333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_15983300_15983600
ES.28010.2	chr6	-	179	1	Intergenic	novelGene_23287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	15983639	15983460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_15983500_15983600
ES.28011.1	chr6	-	174	1	Intergenic	novelGene_23288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCTAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	17029442	17029268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17029300_17029400
ES.28012.1	chr6	+	2514	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	-74	0	-74	0	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	NA	False	NA	NA	False	AATAAA	-15	NA	17065073	17105822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ES.28012.2	chr6	+	1481	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	-11	970	-11	-970	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAGGAAA	-45	True	NA	NA	False	GATAAA	-11	NA	17065136	17104852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ES.28012.3	chr6	+	1569	7	NNC	ENSMUSG00000029552.20	novel	2440	7	NA	NA	4	-850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.7805051019634	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAGTAAAGAAT	-11	True	NA	NA	False	TTTAAA	-17	NA	17065170	17104972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100442_17104591
ES.28012.5	chr6	+	3666	7	NNC	ENSMUSG00000029552.20	novel	2440	7	NA	NA	-9	-916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.7805051019634	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTTTCTTTTTAAC	0	True	NA	NA	False	AATAAA	-17	NA	17065181	17104906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17102415
ES.28012.6	chr6	+	2447	7	NNC	ENSMUSG00000029552.20	novel	2440	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.5270067514739	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	0	True	NA	NA	False	AATAAA	-15	NA	17065181	17105822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17065313_17086135_17086222_17096126_17096380_17097218_17097590_17099702_17099919_17100280_17100440_17104591
ES.28012.7	chr6	+	3045	6	ISM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	49	3498	6	-3498	5prime_fragment	FALSE	canonical	3	87	junction_1	6.49923072370877	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTAATCATTTCAATC	15	True	NA	NA	False	AATAAA	-15	NA	17065196	17102324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280
ES.28012.8	chr6	+	2209	7	NNC	ENSMUSG00000029552.20	novel	2440	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.0944739819828	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	18	True	NA	NA	False	AATAAA	-15	NA	17065199	17105822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17065313_17086135_17086222_17096305_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ES.28013.1	chr6	+	2530	3	FSM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	92	111	-50	-111	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGTGGATGATTTCA	54	False	NA	NA	False	AATAAA	-8	NA	17281275	17289003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17281510_17281893_17282082_17286895
ES.28014.1	chr6	-	194	1	Intergenic	novelGene_23289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACCGGAGCAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	17315532	17315338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17315300_17315500
ES.28015.1	chr6	+	6863	22	FSM	ENSMUSG00000009376.16	ENSMUST00000115443.8	6809	22	-54	0	-54	0	multi-exon	TRUE	canonical	1	2	junction_15	4.2527835355745	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTAGCTAGTCCTG	176	False	NA	NA	False	AATAAA	-27	NA	17463744	17573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
ES.28015.2	chr6	+	6693	21	NIC	ENSMUSG00000009376.16	novel	6809	22	NA	NA	-28	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_14	4.35057467468379	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGCTGTAGCTAGTC	-9	True	NA	NA	False	AATAAA	-24	NA	17463770	17573976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
ES.28015.3	chr6	+	5183	20	NNC	ENSMUSG00000009376.16	novel	6809	22	NA	NA	-27	-7185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.32958085903235	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	-8	True	NA	NA	False	NA	NA	NA	17463771	17564637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531595_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549093_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552
ES.28015.4	chr6	+	3823	12	FSM	ENSMUSG00000009376.16	ENSMUST00000145473.2	3541	12	-282	0	-2	0	multi-exon	FALSE	canonical	3	6	junction_4	3.4997048281673	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAATTTGCATCTCCC	44	False	NA	NA	False	NA	NA	NA	17463823	17541411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436
ES.28015.5	chr6	+	6569	22	NIC	ENSMUSG00000009376.16	novel	6809	22	NA	NA	104	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.8220017296007	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCTGTAGCTAGTCCT	-70	True	NA	NA	False	AATAAA	-26	NA	17463929	17573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17464140_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
ES.28015.6	chr6	+	5346	20	NNC	ENSMUSG00000009376.16	novel	4140	20	NA	NA	932	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	4.94680847895123	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGAGTTGGCTGTA	901	False	NA	NA	False	AATAAA	-17	NA	17492171	17573969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571379_17571508_17571611
ES.28016.1	chr6	+	2611	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	-76	2	-76	-2	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGTAAGTTGTGTGAA	1141	False	NA	NA	False	AGTAAA	-17	NA	17636905	17666969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.10	chr6	+	1914	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	32	591	-20	-591	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTATATTGTCA	4	True	NA	31	True	AGTAAA	-38	NA	17637013	17666380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.11	chr6	+	2633	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	50	-146	-2	146	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGCCAAAACAGTGAT	-6	True	NA	NA	False	TTTAAA	-36	NA	17637031	17667117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.12	chr6	+	5800	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-2	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	580.397756332289	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCTAATTTCCTCT	-6	True	NA	13	True	AATATA	-13	NA	17637031	17666823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17659722_17659756_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.13	chr6	+	1823	9	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-2	-631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	612.19021502716	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCACCAGTGA	-6	True	NA	-9	True	ATTAAA	-28	NA	17637031	17666340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650063_17656214_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.14	chr6	+	2289	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-2	-146	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	596.144015737808	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTAATTTCCTCTTT	-6	True	NA	15	True	AATATA	-15	NA	17637031	17666825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17648583_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.15	chr6	+	5759	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-2	-224	intron_retention	FALSE	canonical	3	1705	junction_6	91.6116122552158	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCATGTTGTTTAATT	-6	True	NA	6	True	AATAAA	-43	NA	17637031	17666747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.16	chr6	+	1760	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	54	723	2	563	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATGTCTCAGTTGATT	-2	True	NA	11	True	AATATA	-19	NA	17637035	17666248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.17	chr6	+	983	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	-73	136	2	-136	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTTAGTGTCTTCG	-2	True	NA	7	True	CATAAA	-17	NA	17637035	17665451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.18	chr6	+	5253	9	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-3	-638	intron_retention	FALSE	canonical	2	7	junction_4	611.808678734619	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAGTAAAAAAAAAATCA	0	True	NA	-16	True	ATTAAA	-21	NA	17637037	17666333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656322_17656444_17657171_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.2	chr6	+	2108	11	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-54	-440	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	552.667314032592	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACGCCTCGGTGAATG	1163	False	NA	6	True	AATATA	-18	NA	17636927	17666531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17636935_17636977_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.20	chr6	+	963	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	58	1516	-1	-132	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTAGTGTCTTCGCGTT	2	True	NA	11	True	CATAAA	-21	NA	17637039	17665455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.21	chr6	+	4405	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	62	-1930	3	1930	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATACAAATGTTTTTTT	6	True	NA	NA	False	AATGAA	-19	NA	17637043	17668901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.22	chr6	+	2926	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	69	-458	10	458	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTATTATTCTT	13	True	NA	NA	False	NA	NA	NA	17637050	17667429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.26	chr6	+	2462	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	14	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	581.527256985676	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGGTAAGTTGTGTGA	17	True	NA	NA	False	AGTAAA	-16	NA	17637054	17666968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654183_17656249_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.27	chr6	+	2149	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	25	-252	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	596.144015737808	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGTATAGATTTTTAA	-24	True	NA	-22	True	AATAAA	-15	NA	17637065	17666719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17648583_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.28	chr6	+	3274	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	27	-596	intron_retention	FALSE	canonical	3	1705	junction_6	67.89467946754	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTTCTTTGTATAT	-22	True	NA	26	True	AGTAAA	-33	NA	17637067	17666375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.29	chr6	+	1910	8	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	27	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	622.905961389594	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACGCCTCGGTGAATG	-22	True	NA	6	True	AATATA	-18	NA	17637067	17666531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637175_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.30	chr6	+	4271	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	27	-248	intron_retention	FALSE	canonical	3	1705	junction_6	87.3709763022023	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATAGATTTTTAAAAAT	-22	True	NA	-18	True	AATAAA	-19	NA	17637067	17666723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.31	chr6	+	2196	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	91	250	32	-250	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTATAGATTTTTAAAA	-17	True	NA	-20	True	AATAAA	-17	NA	17637072	17666721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.32	chr6	+	1827	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	33	-596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	746.269305641877	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTTCTTTGTATAT	-16	True	NA	26	True	AGTAAA	-33	NA	17637073	17666375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650011_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662173_17665065_17665113_17665293
ES.28016.33	chr6	+	2203	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-29	-150	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	579.349635367107	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGGCTAATTTCCT	-10	True	NA	11	True	AATATA	-11	NA	17637079	17666821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656322_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.34	chr6	+	2198	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-21	-250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	578.732800453705	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTATAGATTTTTAAAA	-2	True	NA	-20	True	AATAAA	-17	NA	17637087	17666721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654087_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.35	chr6	+	2307	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-5	-75	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	579.06267385052	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTCTAGATTTTT	14	True	NA	86	True	AATGAA	-12	NA	17637103	17666896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656411_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.36	chr6	+	1837	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	5	-796	2	-588	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTATATTGTCATTC	24	True	NA	34	True	AGTAAA	-41	NA	17637113	17666383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.37	chr6	+	1859	10	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	2	-534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	569.373686660815	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTATGCAACTGCATC	24	True	NA	88	True	NA	NA	NA	17637113	17666437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17648571_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.39	chr6	+	2873	9	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	10168	855	10038	431	3prime_fragment	FALSE	canonical	3	1705	junction_6	84.2554708906193	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTAATGCTTTTTTCT	5544	False	NA	27	True	ATTAAA	-22	NA	17647149	17666116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.4	chr6	+	1713	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	-28	852	-28	434	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATGCTTTTTTCTTGT	1189	False	NA	30	True	ATTAAA	-25	NA	17636953	17666119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.40	chr6	+	2212	9	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	11535	149	11405	-149	3prime_fragment	FALSE	canonical	3	1705	junction_6	84.2554708906193	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGGCTAATTTCCTC	-14	True	NA	12	True	AATATA	-12	NA	17648516	17666822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.41	chr6	+	2046	8	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	13019	250	-10604	-250	3prime_fragment	FALSE	canonical	3	1705	junction_5	52.2243980827165	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTATAGATTTTTAAAA	1470	False	NA	-20	True	AATAAA	-17	NA	17650000	17666721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.42	chr6	+	5978	7	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	13154	234	-10469	-234	3prime_fragment	FALSE	canonical	3	1705	junction_4	52.5378170675393	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATAAGAGCATG	1605	False	NA	-4	True	AATAAA	-33	NA	17650135	17666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.43	chr6	+	2484	4	FSM	ENSMUSG00000015733.14	ENSMUST00000142592.2	749	4	-1304	-431	-1304	431	multi-exon	FALSE	canonical	3	1705	junction_1	70.5596674217408	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTAATGCTTTTTTCT	NA	False	NA	27	True	ATTAAA	-22	NA	17659300	17666116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.44	chr6	+	3875	2	ISM	ENSMUSG00000015733.14	ENSMUST00000142592.2	749	4	2085	-1060	2085	-226	3prime_fragment	FALSE	canonical	3	1763	junction_1	0	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGCATGTTGTTTAA	671	False	NA	4	True	AATAAA	-41	NA	17662689	17666745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_17665113_17665293
ES.28016.5	chr6	+	2115	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	-18	440	-18	-440	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACGCCTCGGTGAATG	1199	False	NA	6	True	AATATA	-18	NA	17636963	17666531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.6	chr6	+	7243	8	NNC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	-16	-139	intron_retention	FALSE	canonical	2	7	junction_3	635.760704565317	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCCTCTTTAGCTTTT	1201	False	NA	22	True	AATATA	-22	NA	17636965	17666832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_17637160_17648518_17650054_17654104_17654169_17656322_17656444_17657171_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.7	chr6	+	4440	9	NIC	ENSMUSG00000015733.14	novel	2537	10	NA	NA	21	-144	intron_retention	FALSE	canonical	3	1705	junction_6	87.3709763022023	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTAATTTCCTCTTTAG	1238	False	NA	17	True	AATATA	-17	NA	17637002	17666827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.8	chr6	+	2304	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	-102	-1156	25	-228	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAGAGCATGTTGTTT	-3	True	NA	2	True	AATAAA	-39	NA	17637006	17666743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
ES.28016.9	chr6	+	2372	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	26	139	-26	-139	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCCTCTTTAGCTTTT	-2	True	NA	22	True	AATATA	-22	NA	17637007	17666832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ES.28017.1	chr6	-	4654	1	Intergenic	novelGene_23290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAGGAATTACATTAGA	8998	False	NA	NA	False	NA	NA	NA	17646232	17641578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17641600_17646200
ES.28018.1	chr6	+	2157	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	-57	-54	-19	0	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	-4	True	NA	NA	False	AATAAA	-23	NA	17693973	17943019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ES.28018.2	chr6	+	4156	16	NIC	ENSMUSG00000029534.18	novel	2115	16	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_10	11.5654658358408	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	-4	True	NA	NA	False	AATAAA	-23	NA	17694011	17943019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17905705_17905842_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ES.28018.3	chr6	+	1625	10	Fusion	ENSMUSG00000029534.18_ENSMUSG00002076529.1	novel	1678	13	NA	NA	-18	-17166	multi-exon	FALSE	canonical	0	0	junction_9	11.1055541659718	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCGCATTACTTGTTAC	-3	True	NA	NA	False	ATTAAA	-13	NA	17694012	17887756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17887338
ES.28018.4	chr6	+	2287	17	NIC	ENSMUSG00000029534.18	novel	2115	16	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	11.8333149941172	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	33	False	NA	NA	False	AATAAA	-23	NA	17694048	17943019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17905705_17905842_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ES.28018.5	chr6	+	2094	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	75	-54	-60	0	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	34	False	NA	NA	False	AATAAA	-23	NA	17694105	17943019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ES.28019.1	chr6	-	2400	1	Antisense	novelGene_ENSMUSG00000106822.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGTAAGGAAGGTGCCT	NA	False	NA	NA	False	AAGAAA	-7	NA	17722286	17719886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_17719900_17722300
ES.2802.1	chr10	-	4214	1	Genic_Genomic	ENSMUSG00000019877.11	novel	NA	NA	NA	NA	15708	3286	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-32	NA	57392797	57388583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_57388600_57392800
ES.2802.11	chr10	-	9244	5	NIC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	4	-8	intron_retention	FALSE	canonical	3	192	junction_4	48.7467947664254	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAACGTGTGGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	57408569	57391877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_57393389_57395458_57395690_57395793_57399313_57400056_57403923_57408452
ES.2802.13	chr10	-	2502	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	13	365	13	-365	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTGCTGTCCAGCATGC	NA	False	NA	NA	False	GATAAA	-15	NA	57408613	57392234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ES.2802.14	chr10	-	1858	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	60	962	7	-962	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATGTAAATAAGTCA	NA	False	NA	NA	False	TATAAA	-16	NA	57408566	57392831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ES.2802.2	chr10	-	4739	8	NIC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	3	2000	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	94.0811633969439	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTAAAAGAAGTATTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	57408623	57389869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ES.2802.3	chr10	-	2883	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	-2	-1	-2	1	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTGGTAGCATTACAA	NA	False	NA	NA	False	AATAAA	-17	NA	57408628	57391868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ES.2802.4	chr10	-	4990	8	NIC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	187	junction_6	46.3694128599834	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408566	57391869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57403923_57408452
ES.2802.6	chr10	-	3122	9	NNC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.163385843069	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408335	57391869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57407919
ES.2802.7	chr10	-	5899	8	NNC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_6	94.7611390253819	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408534	57391869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_57393389_57395458_57395690_57395793_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403762_57403923_57408452
ES.2802.8	chr10	-	2742	9	NIC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	21	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	89.3020681451443	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACGTGTGGTGGTAGC	NA	False	NA	NA	False	AATAAA	-10	NA	57408605	57391875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400084_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ES.2802.9	chr10	-	3038	8	NIC	ENSMUSG00000019877.11	novel	2880	9	NA	NA	2	-8	intron_retention	FALSE	canonical	3	187	junction_5	45.377329591067	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAACGTGTGGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	57408571	57391877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400496_57401420_57401591_57403760_57403923_57408452
ES.28020.1	chr6	-	1672	1	Intergenic	novelGene_23291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACCAAAAACC	NA	False	NA	NA	False	AATAGA	-21	NA	17779659	17777987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17778000_17779700
ES.28021.1	chr6	-	2776	3	Intergenic	novelGene_23292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATGAGGAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	17840568	17801286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17803865_17829075_17829197_17840491
ES.28021.2	chr6	-	2872	3	Intergenic	novelGene_23293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTATTTGCTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	17840591	17825610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_17828270_17829075_17829189_17840491
ES.28021.3	chr6	-	2750	1	Antisense	novelGene_ENSMUSG00000029534.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAAGTATTTGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	17828362	17825612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_17825600_17828400
ES.28022.1	chr6	-	1785	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	-47	-2	-43	2	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGCTCATTTGTCAT	12	False	NA	NA	False	AATAAA	-26	NA	18109103	18050960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
ES.28023.1	chr6	-	315	1	FSM	ENSMUSG00000082289.2	ENSMUST00000121139.2	784	1	637	-168	637	168	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAATTGAAC	716	False	NA	NA	False	TATAAA	-19	NA	18156482	18156167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_18156200_18156500
ES.28024.1	chr6	-	5951	23	FSM	ENSMUSG00000000416.17	ENSMUST00000090601.12	5183	23	-25	-743	-3	0	multi-exon	FALSE	canonical	0	0	junction_21	3.78366432211941	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATTTTGCTGTATTT	-14	True	NA	NA	False	AATAAA	-14	NA	18514845	18366476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
ES.28024.2	chr6	-	5952	24	NNC	ENSMUSG00000000416.17	novel	5183	23	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4.45901308941441	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTGTCTTATAAATAAA	-1	True	NA	NA	False	AATAAA	-16	NA	18514832	18366561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18403569_18403669_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
ES.28024.3	chr6	-	5811	23	FSM	ENSMUSG00000000416.17	ENSMUST00000090601.12	5183	23	-26	-602	-4	-54	multi-exon	FALSE	canonical	0	0	junction_21	3.78366432211941	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGCCTTCAATATATTTC	-15	True	NA	NA	False	ATTAAA	-13	NA	18514846	18366617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
ES.28024.4	chr6	-	5666	22	NNC	ENSMUSG00000000416.17	novel	5183	23	NA	NA	11208	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	3.81249883833297	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACCTAAGTGGATA	NA	False	NA	NA	False	AATAAA	-22	NA	18490847	18366685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18490623
ES.28024.5	chr6	-	5464	22	NNC	ENSMUSG00000000416.17	novel	5183	23	NA	NA	17574	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	3.81249883833297	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTGTACCTAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	18484481	18366689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18484455
ES.28024.6	chr6	-	4076	4	FSM	ENSMUSG00000000416.17	ENSMUST00000139557.2	3982	4	-58	-36	-14	36	multi-exon	FALSE	canonical	0	0	junction_2	2.62466929133727	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAACAAAAACAAAA	-25	True	NA	NA	False	NA	NA	NA	18514856	18431902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_18435446_18448246_18448469_18501947_18502056_18514653
ES.28024.7	chr6	-	4119	4	NNC	ENSMUSG00000000416.17	novel	3982	4	NA	NA	-1	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAC	-12	True	NA	NA	False	NA	NA	NA	18514843	18431906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_18435446_18448186_18448469_18501947_18502056_18514653
ES.28024.8	chr6	-	3794	3	NNC	ENSMUSG00000000416.17	novel	3982	4	NA	NA	11224	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGGAAAAAAACAA	NA	False	NA	NA	False	ACTAAA	-43	NA	18490831	18431910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_18435446_18448246_18448469_18490794
ES.28025.1	chr6	+	834	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	-21	-6	-21	6	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTTCCTTTTTTT	NA	False	NA	23	True	AATAAA	-23	NA	18848556	18854058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ES.28025.2	chr6	+	4603	2	FSM	ENSMUSG00000044155.12	ENSMUST00000128526.2	890	2	-65	-3648	12	2	multi-exon	FALSE	canonical	3	968	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTCTTTTCTTTCCTTT	-3	True	NA	19	True	AATAAA	-19	NA	18848589	18854054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_18848763_18849624
ES.28025.3	chr6	+	603	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	53	151	-9	-151	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAATCTAAGGATCAT	-18	True	NA	NA	False	AATAAA	-34	NA	18848630	18853901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ES.28026.1	chr6	-	176	1	Intergenic	novelGene_23294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	18967789	18967613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_18967600_18967800
ES.28027.1	chr6	-	184	1	Intergenic	novelGene_23295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGCCCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	19903307	19903123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_19903100_19903300
ES.28028.1	chr6	+	117	1	Intergenic	novelGene_23296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATTATGAATAATTT	NA	False	NA	NA	False	NA	NA	NA	21400772	21400889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_21400800_21400900
ES.28029.1	chr6	+	2694	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	-31	1137	-31	-2	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	NA	False	NA	20	True	AATATA	-19	NA	21949538	21974900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.10	chr6	+	1940	10	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	-2	177	intron_retention	FALSE	canonical	3	141	junction_5	12.7579556394732	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGCTATGAATATTATT	-9	True	NA	NA	False	AGTAAA	-17	NA	21950016	21973902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.11	chr6	+	1459	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	449	2136	0	176	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCTATGAATATTAT	-7	True	NA	NA	False	AGTAAA	-16	NA	21950018	21973901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.12	chr6	+	2046	11	ISM	ENSMUSG00000029670.13	ENSMUST00000115389.8	2546	12	371	373	8	0	3prime_fragment	FALSE	canonical	3	7	junction_5	47.52683452535	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	1	True	NA	8	True	AATAAA	-8	NA	21950026	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968916_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.13	chr6	+	2663	11	NNC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.271188335578	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGTGATGTGGCAGTTA	1	True	NA	22	True	AATATA	-21	NA	21950026	21974902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_21950320_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.14	chr6	+	1936	10	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	20	171	intron_retention	FALSE	canonical	3	141	junction_5	13.6959938271591	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGGTGTGCTATGAAT	13	True	NA	NA	False	AGTAAA	-11	NA	21950038	21973896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971849_21973581
ES.28029.15	chr6	+	4569	9	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	24	9	intron_retention	FALSE	canonical	3	141	junction_4	13.4437485471873	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATTTATACTTTACAC	17	True	NA	17	True	AATAAA	-17	NA	21950042	21974538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.16	chr6	+	3389	9	NNC	ENSMUSG00000029670.13	novel	1847	12	NA	NA	-243	177	intron_retention	FALSE	non_canonical	0	0	junction_1	53.0316827472031	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGCTATGAATATTATT	1423	False	NA	NA	False	AGTAAA	-17	NA	21951812	21973902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_21953092_21953398_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.2	chr6	+	2258	12	FSM	ENSMUSG00000029670.13	ENSMUST00000115389.8	2546	12	-85	373	1	0	multi-exon	FALSE	canonical	3	7	junction_6	46.7513203066312	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	NA	False	NA	8	True	AATAAA	-8	NA	21949570	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968916_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.3	chr6	+	2186	11	NIC	ENSMUSG00000029670.13	novel	2546	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	60.2087202986411	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	NA	False	NA	8	True	AATAAA	-8	NA	21949570	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968916_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.4	chr6	+	2217	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	44.129468612255	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	NA	False	NA	8	True	AATAAA	-8	NA	21949572	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.5	chr6	+	2223	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	69	1508	-9	0	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	-20	True	NA	8	True	AATAAA	-8	NA	21949638	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.6	chr6	+	2499	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	44.129468612255	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	3	True	NA	20	True	AATATA	-19	NA	21949661	21974900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.7	chr6	+	2500	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	407	1137	-42	-2	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCGTGATGTGGCAGT	318	False	NA	20	True	AATATA	-19	NA	21949976	21974900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.8	chr6	+	2101	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	435	1508	-14	0	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	-21	True	NA	8	True	AATAAA	-8	NA	21950004	21974529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.28029.9	chr6	+	3608	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	436	0	-13	0	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTGAGTGTTCGAT	-20	True	NA	NA	False	NA	NA	NA	21950005	21976037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ES.2803.1	chr10	-	293	1	Intergenic	novelGene_2134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATTTAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	57492853	57492560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_57492600_57492900
ES.2803.2	chr10	-	172	1	Intergenic	novelGene_2135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGATGTGAGTGAGGTC	NA	False	NA	NA	False	NA	NA	NA	57492852	57492680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_57492700_57492900
ES.28030.1	chr6	-	2313	1	Antisense	novelGene_ENSMUSG00000062980.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAAGTGACTTGGAACC	NA	False	NA	NA	False	NA	NA	NA	22125824	22123511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_22123500_22125800
ES.28031.1	chr6	-	5359	1	Intergenic	novelGene_23297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCACTCAGCATTCAAAC	1836	False	NA	NA	False	NA	NA	NA	22305210	22299851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22299900_22305200
ES.28032.1	chr6	+	1853	1	Antisense	novelGene_ENSMUSG00000029672.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22324610	22326463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_22324600_22326500
ES.28033.1	chr6	+	2375	1	Antisense	novelGene_ENSMUSG00000029672.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAACCCTCTTATCACT	NA	False	NA	NA	False	NA	NA	NA	22341110	22343485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_22341100_22343500
ES.28034.1	chr6	-	2608	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	138.281189971738	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	-20	True	NA	0	True	ATTAAA	-22	NA	22356052	22306518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22343264_22343319_22355993
ES.28034.10	chr6	-	2685	11	NNC	ENSMUSG00000029672.17	novel	1617	11	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.948060245125	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGACGTGTAGTAGTTG	-25	True	NA	-7	True	ATTAAA	-15	NA	22356146	22306525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308180_22308294_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.11	chr6	-	2795	9	FSM	ENSMUSG00000029672.17	ENSMUST00000081288.14	1487	9	47	-1355	-30	-7	multi-exon	FALSE	canonical	2	7	junction_8	138.299493853015	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGACGTGTAGTAGTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	22356195	22306525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22355993
ES.28034.12	chr6	-	2712	11	NNC	ENSMUSG00000029672.17	novel	1617	11	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.948060245125	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGACGTGTAGTAGTT	-20	True	NA	-8	True	ATTAAA	-14	NA	22356141	22306526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22307485_22307566_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.13	chr6	-	2671	8	NIC	ENSMUSG00000029672.17	novel	1487	9	NA	NA	-15	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	146.483265046815	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACACTGACGTGTAGTA	3	True	NA	-11	True	ATTAAA	-11	NA	22356180	22306529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22355993
ES.28034.14	chr6	-	2374	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-24	476	-24	-476	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATAAGTACTCTTGGT	-6	True	NA	NA	False	AATAAA	-30	NA	22356189	22306994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.15	chr6	-	1453	9	FSM	ENSMUSG00000029672.17	ENSMUST00000081288.14	1487	9	53	-19	-24	19	multi-exon	FALSE	canonical	2	7	junction_8	138.299493853015	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACAGTTTTTTTGTTGTT	-6	True	NA	-2	True	AATAAA	-40	NA	22356189	22307861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22355993
ES.28034.17	chr6	-	1519	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-42	1349	35	13	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACAACAGTTTTTTT	NA	False	NA	-8	True	AATAAA	-34	NA	22356207	22307867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.18	chr6	-	2394	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-7	13	intron_retention	FALSE	canonical	3	400	junction_3	16.3764312351623	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACAACAGTTTTTTT	11	False	22356183	-8	True	AATAAA	-34	NA	22356172	22307867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.19	chr6	-	9501	7	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-15	6	intron_retention	FALSE	canonical	3	400	junction_3	17.929646461161	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGTGAAAAGCACAACAG	3	True	NA	-15	True	AATAAA	-27	NA	22356180	22307874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.2	chr6	-	2866	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	-40	0	37	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	NA	False	NA	0	True	ATTAAA	-22	NA	22356205	22306518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.20	chr6	-	1669	11	FSM	ENSMUSG00000029672.17	ENSMUST00000163963.8	1617	11	-61	9	7	-9	multi-exon	FALSE	canonical	0	0	junction_9	168.873325306278	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTACATCAGATTTG	25	False	22356183	-30	True	AATAAA	-12	NA	22356158	22307889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355012_22355234_22355993
ES.28034.21	chr6	-	1628	11	NNC	ENSMUSG00000029672.17	novel	1617	11	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	166.584182922629	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTACATCAGATTTG	-30	True	NA	-30	True	AATAAA	-12	NA	22356151	22307889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22335163_22335322_22339242_22339377_22343264_22343319_22355993
ES.28034.22	chr6	-	1416	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	9	-9	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTACATCAGATTTG	27	False	22356183	-30	True	AATAAA	-12	NA	22356156	22307889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
ES.28034.24	chr6	-	1280	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-28	-114	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGTCTGTGTACTGTC	-4	True	NA	NA	False	AATGAA	-13	NA	22356125	22307994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
ES.28034.25	chr6	-	2105	3	ISM	ENSMUSG00000029672.17	ENSMUST00000163371.8	775	10	0	28079	0	-15116	5prime_fragment	FALSE	canonical	3	412	junction_1	1	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACCTGGTTACTGTAGT	49	True	NA	NA	False	NA	NA	NA	22356072	22337404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_22339377_22343264_22343319_22355993
ES.28034.26	chr6	-	2940	1	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	3568	-15116	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACCTGGTTACTGTAGT	3371	False	NA	NA	False	NA	NA	NA	22340344	22337404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22337400_22340300
ES.28034.3	chr6	-	3026	11	NNC	ENSMUSG00000029672.17	novel	1617	11	NA	NA	166	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.873325306278	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	277	False	NA	0	True	ATTAAA	-22	NA	22355906	22306518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355012_22355234_22355755
ES.28034.4	chr6	-	3825	10	NNC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	1	junction_6	170.79559655468	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-2	True	NA	-1	True	ATTAAA	-21	NA	22356123	22306519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22322348_22328553_22328678_22329577_22329608_22335163_22335296_22339271_22339377_22343264_22343319_22355993
ES.28034.5	chr6	-	3282	10	NNC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	132.971267665956	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-8	True	NA	-1	True	ATTAAA	-21	NA	22356129	22306519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321872_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.6	chr6	-	3127	12	NNC	ENSMUSG00000029672.17	novel	775	10	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	203.008325359551	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-18	True	NA	-1	True	ATTAAA	-21	NA	22356139	22306519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22326356_22326418_22328553_22328678_22329175_22329443_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.7	chr6	-	3692	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	33	-1	intron_retention	FALSE	canonical	3	400	junction_3	16.2052267802706	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAGTAGTTGCAGTGA	-11	True	NA	-1	True	ATTAAA	-21	NA	22356132	22306519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22329608_22339271_22339377_22343264_22343319_22355993
ES.28034.9	chr6	-	2804	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGACGTGTAGTAGTTG	3	True	NA	-7	True	ATTAAA	-15	NA	22356180	22306525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
ES.28035.1	chr6	-	172	1	Intergenic	novelGene_23298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAGCAATGTG	3682	False	NA	NA	False	NA	NA	NA	22388387	22388215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22388200_22388400
ES.28036.1	chr6	-	157	1	Intergenic	novelGene_23299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	22434323	22434166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22434200_22434300
ES.28037.1	chr6	+	172	1	Intergenic	novelGene_23300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAACAACAACA	1483	False	NA	NA	False	NA	NA	NA	22441618	22441790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_22441600_22441800
ES.28038.1	chr6	-	375	1	Intergenic	novelGene_23301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATAACCCACGTCAC	NA	False	NA	NA	False	NA	NA	NA	22444951	22444576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22444600_22445000
ES.28039.1	chr6	-	171	1	Intergenic	novelGene_23302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCAGTGAGAGCGAG	NA	False	NA	NA	False	NA	NA	NA	22495906	22495735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22495700_22495900
ES.2804.1	chr10	+	3086	5	FSM	ENSMUSG00000019876.16	ENSMUST00000075992.12	5317	5	45	2186	2	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTTTGAAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	57508191	57615022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_57508304_57528177_57528270_57568298_57568367_57604185_57604363_57612385
ES.28040.1	chr6	-	167	1	Intergenic	novelGene_23303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	22501148	22500981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_22501000_22501100
ES.28041.1	chr6	+	177	1	Intergenic	novelGene_23304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAGTGA	NA	False	NA	NA	False	NA	NA	NA	22830877	22831054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_22830900_22831100
ES.28042.1	chr6	+	126	1	Intergenic	novelGene_23305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTGTCTTGGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	23085281	23085407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_23085300_23085400
ES.28043.1	chr6	+	205	1	Intergenic	novelGene_23306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCCACTACCTGATCA	2759	False	NA	NA	False	NA	NA	NA	23093676	23093881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_23093700_23093900
ES.28044.1	chr6	-	3417	24	FSM	ENSMUSG00000029695.14	ENSMUST00000031707.14	3701	24	-46	330	-46	-330	multi-exon	TRUE	canonical	0	0	junction_6	3.81024387829681	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTTGAGTTTTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	23133031	23072501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_23073090_23074526_23074704_23075160_23075250_23075739_23075856_23077077_23077174_23078826_23078995_23091197_23091339_23092263_23092373_23092462_23092574_23093894_23094022_23094188_23094311_23096824_23096893_23097141_23097202_23107138_23107251_23107615_23107739_23109425_23109575_23113424_23113553_23113674_23113754_23114839_23114987_23115086_23115155_23118668_23118754_23120875_23121053_23122511_23122737_23132879
ES.28045.1	chr6	-	4872	27	NNC	ENSMUSG00000017978.19	novel	4571	28	NA	NA	-107	0	intron_retention	FALSE	non_canonical	0	0	junction_3	1.30599437279613	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCTATGTTCATTAC	9	True	NA	NA	False	AATAAA	-17	NA	23839527	23262837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_23263716_23269244_23269350_23287662_23287771_23302292_23302326_23302429_23302514_23314131_23314219_23321704_23321853_23323278_23323435_23329018_23329161_23344205_23344363_23355822_23355927_23382879_23383004_23385465_23385530_23390383_23390486_23410740_23410929_23412946_23413084_23427162_23427364_23429108_23429218_23443970_23444038_23496756_23496897_23528050_23528163_23583340_23583463_23587375_23587613_23599428_23599510_23626491_23626825_23688845_23688960_23838788
ES.28045.3	chr6	-	4031	14	FSM	ENSMUSG00000017978.19	ENSMUST00000115356.3	3533	14	-78	-420	-41	420	multi-exon	FALSE	canonical	0	0	junction_1	1.4995068222783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGGTCTTCTCCTGTT	196	False	NA	NA	False	AATAAA	-14	NA	23839340	23408403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_23410042_23410740_23410929_23412946_23413084_23427162_23427364_23429108_23429218_23443970_23444038_23496756_23496897_23528050_23528163_23583340_23583463_23587375_23587613_23599428_23599510_23626491_23626825_23688845_23688960_23838788
ES.28046.1	chr6	+	160	1	Intergenic	novelGene_23307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	23851893	23852053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_23851900_23852100
ES.28047.1	chr6	-	117	1	Intergenic	novelGene_23308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGCTGACATCTCG	NA	False	NA	NA	False	NA	NA	NA	24125355	24125238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_24125200_24125400
ES.28048.1	chr6	+	205	1	Intergenic	novelGene_23309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTGGAGCTCAATGCT	NA	False	NA	NA	False	NA	NA	NA	24161525	24161730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_24161500_24161700
ES.28049.1	chr6	-	183	1	Intergenic	novelGene_23310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAGATTTGACTCCT	NA	False	NA	NA	False	NA	NA	NA	24358237	24358054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_24358100_24358200
ES.2805.1	chr10	-	3012	1	Intergenic	novelGene_2136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	57983964	57980952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_57981000_57984000
ES.28050.1	chr6	-	1947	7	NNC	ENSMUSG00000046192.5	novel	3651	13	NA	NA	22676	-578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.58198889747161	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATATCTGTCTGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	24492390	24445441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24446242_24449682_24449869_24450602_24450852_24461861_24462033_24479142_24479319_24491462_24491674_24492236
ES.28050.2	chr6	-	2139	8	NNC	ENSMUSG00000046192.5	novel	3651	13	NA	NA	22871	-580	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	1.8405855323893	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCCATATCTGTCTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	24492195	24445443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24446242_24449682_24449869_24450602_24450852_24454135_24454313_24461861_24462033_24479142_24479319_24491462_24491674_24492024
ES.28051.1	chr6	-	481	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	400	-6	-43	6	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTTATTGACTTCT	417	False	NA	-25	True	ATTAAA	-33	NA	24527612	24518658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ES.28051.2	chr6	-	4909	4	NIC	ENSMUSG00000023089.13	novel	875	5	NA	NA	-20	4	intron_retention	FALSE	canonical	3	2597	junction_3	441.529915936244	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	484	False	NA	-27	True	ATTAAA	-31	NA	24527545	24518660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24518824_24519190_24519257_24522657_24527317_24527524
ES.28051.3	chr6	-	4189	3	NIC	ENSMUSG00000023089.13	novel	875	5	NA	NA	15	4	intron_retention	FALSE	canonical	3	2597	junction_2	536	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	11	True	NA	-27	True	ATTAAA	-31	NA	24527554	24518660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24522775_24527271_24527317_24527524
ES.28051.5	chr6	-	312	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	3	0	3	0	multi-exon	FALSE	canonical	3	83	junction_2	1436.47492920072	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	-1	True	NA	-31	True	ATTAAA	-27	NA	24527566	24518664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
ES.28051.7	chr6	-	3818	4	NIC	ENSMUSG00000023089.13	novel	875	5	NA	NA	14	0	intron_retention	FALSE	canonical	3	2597	junction_3	465.906285283496	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGTCCATGTTATT	10	True	NA	-32	True	ATTAAA	-26	NA	24527555	24518665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24518824_24519190_24522775_24527271_24527317_24527524
ES.28052.1	chr6	+	3298	1	Antisense	novelGene_ENSMUSG00000106946.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCAATGTGAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	24657080	24660378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_24657100_24660400
ES.28052.2	chr6	+	2042	1	Antisense	novelGene_ENSMUSG00000106946.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAATCAAG	NA	False	NA	NA	False	NA	NA	NA	24659536	24661578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_24659500_24661600
ES.28053.1	chr6	-	4283	10	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.8570211729465	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTCATTTGTTATTA	-11	True	NA	NA	False	AATAAA	-29	NA	24664950	24613801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24633820_24633933_24634574_24634658_24637647_24637783_24664534
ES.28053.11	chr6	-	4428	12	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	75.8362742747016	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	13	True	NA	NA	False	AATAAA	-17	NA	24664986	24613813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24618726_24618835_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.12	chr6	-	4061	11	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	17	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.6164994040402	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	29	True	NA	NA	False	AATAAA	-17	NA	24664970	24613813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619459_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.13	chr6	-	4364	11	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	-28	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9634055070257	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	-37	True	NA	NA	False	AATAAA	-17	NA	24665036	24613813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616340_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.16	chr6	-	4072	9	NIC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	-1	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	66.8252151137578	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTATAAAATAGTGTG	1	True	NA	NA	False	AATAAA	-14	NA	24664938	24613816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24616346_24618271_24618381_24619183_24619702_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.17	chr6	-	4209	12	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	-12	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.8326168372825	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTATAAAATAGTGTG	-21	True	NA	NA	False	AATAAA	-14	NA	24665020	24613816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534_24664724_24664865
ES.28053.19	chr6	-	4343	12	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	10	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	75.931134523874	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTATAAAATAGTGTG	22	True	NA	NA	False	AATAAA	-14	NA	24664977	24613816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24630040_24630076_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.2	chr6	-	4451	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	-99	0	-99	0	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTCTCATTTGTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	24665107	24613803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.20	chr6	-	2272	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	3	2077	3	-2077	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTTTTAAGTGATGTA	-6	True	NA	-14	True	AATAAA	-18	NA	24665005	24615880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.21	chr6	-	6772	10	NIC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	12	-2080	intron_retention	FALSE	canonical	3	160	junction_6	20.9467284342631	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTTTTTTAAGTGAT	24	True	NA	-17	True	AATAAA	-15	NA	24664975	24615883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24616346_24618271_24618381_24619183_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.22	chr6	-	2024	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	70	2258	-1	-2258	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGGATGCTCACGTGA	1	True	NA	NA	False	TATAAA	-29	NA	24664938	24616061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.23	chr6	-	2590	1	Intergenic	novelGene_23311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCTTAAGTGTGC	NA	False	NA	NA	False	TATAAA	-10	NA	24622656	24620066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_24620100_24622700
ES.28053.24	chr6	-	1278	5	FSM	ENSMUSG00000029684.15	ENSMUST00000041737.8	1298	5	17	3	17	-3	multi-exon	FALSE	canonical	0	0	junction_1	91.9524333555127	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTGAATTATTAAT	29	True	NA	NA	False	AATAAA	-14	NA	24664970	24632686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24633210_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.3	chr6	-	4392	12	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	72.9673310801394	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTCTCATTTGTTAT	30	True	NA	NA	False	AATAAA	-27	NA	24664969	24613803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24638552_24638632_24664534
ES.28053.5	chr6	-	2299	12	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	57.2907619512839	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATAGTGTGTCTCATT	-6	True	NA	NA	False	AATAAA	-21	NA	24665005	24613809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24614211_24616254_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ES.28053.7	chr6	-	4194	1	NIC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	10068	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAATAGTGTGTCTCAT	1597	False	NA	NA	False	AATAAA	-20	NA	24618004	24613810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_24613800_24618000
ES.28053.8	chr6	-	4289	10	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	-82	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.4878752596017	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24665090	24613813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24637811_24637899_24664534
ES.28053.9	chr6	-	3024	4	NNC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	3754	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.9517576642817	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATAAAATAGTGTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24624318	24613813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_24616346_24618271_24618381_24619183_24619483_24624234
ES.28054.1	chr6	-	1064	4	Intergenic	novelGene_23312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCTGCTTCTACTG	NA	False	NA	NA	False	ATTAAA	-23	NA	24697329	24695341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_24696224_24696306_24696368_24696974_24697045_24697278
ES.28055.1	chr6	+	159	1	Intergenic	novelGene_23313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAACCTTTTAAAA	5500	False	NA	NA	False	NA	NA	NA	24753840	24753999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_24753800_24754000
ES.28056.1	chr6	+	168	1	Intergenic	novelGene_23314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAATA	NA	False	NA	NA	False	NA	NA	NA	24911461	24911629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_24911500_24911600
ES.28057.1	chr6	-	2340	1	FSM	ENSMUSG00000048022.12	ENSMUST00000127247.4	5157	1	205	2612	205	-2612	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACATCAGGCCTAATT	-3	True	NA	NA	False	AATAAA	-21	NA	24956091	24953751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_24953800_24956100
ES.28058.1	chr6	-	3297	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	2	226	combination_of_known_junctions	TRUE	canonical	3	22	junction_14	31.693847983481	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACCATTGAGTTTGGT	6	True	NA	NA	False	NA	NA	NA	25809192	25743509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ES.28058.12	chr6	-	3558	10	ISM	ENSMUSG00000029676.16	ENSMUST00000166445.8	1923	15	31892	-636	-19929	-208	3prime_fragment	FALSE	canonical	3	94	junction_8	19.6468827043885	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	NA	False	NA	-6	True	AATAAA	-14	NA	25766124	25743943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250
ES.28058.13	chr6	-	2893	17	NNC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-7	-209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	43.6361017392709	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTTGTGTCTGTGTG	-7	True	NA	-7	True	AATAAA	-13	NA	25809232	25743944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758825_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ES.28058.14	chr6	-	3020	18	NNC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	2	-209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	50.9169212735051	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTTGTGTCTGTGTG	12	True	NA	-7	True	AATAAA	-13	NA	25809213	25743944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25767957_25768095_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ES.28058.17	chr6	-	1710	9	NIC	ENSMUSG00000029676.16	novel	2447	10	NA	NA	-5	-695	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	34.9229061648655	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTCTCTCTTTTCAG	-1	True	NA	NA	False	ATTAAA	-29	NA	25809199	25758378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ES.28058.18	chr6	-	4583	1	Intergenic	novelGene_23315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTTACTAGTTTTTA	NA	False	NA	NA	False	AATATA	-16	NA	25790068	25785485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_25785500_25790100
ES.28058.19	chr6	-	4001	2	ISM	ENSMUSG00000029676.16	ENSMUST00000136089.2	2084	3	0	3447	0	-1657	5prime_fragment	FALSE	canonical	3	116	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAAACTTAGCCATGTA	10	True	NA	NA	False	CATAAA	-34	NA	25809215	25801981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_25805941_25809173
ES.28058.2	chr6	-	3126	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	0	25	0	-25	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTGATGAATTTTCT	0	True	NA	NA	False	AAAAAG	-16	NA	25809225	25743760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ES.28058.3	chr6	-	3004	18	NNC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	-41	-199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.5227471271356	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGTGTGTGTGAA	NA	False	NA	3	True	AATAAA	-23	NA	25809286	25743934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758825_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ES.28058.4	chr6	-	2975	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	-25	201	-5	-201	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGTGTGTGTG	0	True	NA	1	True	AATAAA	-21	NA	25809250	25743936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ES.28058.6	chr6	-	2911	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	7	-206	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	31.693847983481	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGTCTGTGTGTGT	12	False	25809250	-4	True	AATAAA	-16	NA	25809238	25743941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
ES.28058.7	chr6	-	2853	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	2	-206	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	35.5245843571744	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGTCTGTGTGTGT	6	True	NA	-4	True	AATAAA	-16	NA	25809219	25743941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ES.28059.1	chr6	+	2526	5	NNC	ENSMUSG00000106799.2	novel	1565	9	NA	NA	-19	-13092	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAGTGACTATCTCTG	5	True	NA	NA	False	AATAAA	-18	NA	25931405	25945066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_25931589_25939550_25939659_25941225_25941311_25941801_25941928_25943042
ES.28059.2	chr6	+	2477	5	NNC	ENSMUSG00000106799.2	novel	1565	9	NA	NA	6633	-13095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGAGAGTGACTATCT	6657	False	NA	NA	False	AATAAA	-15	NA	25938057	25945063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_25938109_25939550_25939659_25940042_25940156_25941126_25941311_25943042
ES.2806.1	chr10	-	2787	1	FSM	ENSMUSG00000075046.8	ENSMUST00000176875.4	2025	1	-90	-672	-90	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	58068587	58065800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_58065800_58068600
ES.28060.1	chr6	+	178	1	Intergenic	novelGene_23316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGTAATCAATTA	NA	False	NA	NA	False	NA	NA	NA	26968336	26968514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_26968300_26968500
ES.28061.1	chr6	+	175	1	Intergenic	novelGene_23317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	28102238	28102413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_28102200_28102400
ES.28062.1	chr6	-	4004	1	Intergenic	novelGene_23318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAACTCTCTA	4460	False	NA	NA	False	NA	NA	NA	28209368	28205364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28205400_28209400
ES.28063.1	chr6	-	7313	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	0	464	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAACTGTGAAATGATTT	-6	True	NA	NA	False	AATAAA	-27	NA	28261931	28210542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.10	chr6	-	5135	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	-3	-1717	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCGGTGATATGTTTAA	-9	True	NA	NA	False	AATAAA	-18	NA	28261934	28212723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.11	chr6	-	5089	1	FSM	ENSMUSG00000106990.2	ENSMUST00000201159.2	3798	1	-3008	1717	-3008	-1717	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCGGTGATATGTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	28217812	28212723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28212700_28217800
ES.28063.12	chr6	-	4859	3	ISM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	14169	-839	14169	839	3prime_fragment	FALSE	canonical	3	34	junction_1	7.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGCGTCTCTTCCTA	8829	False	NA	NA	False	AATAAA	-24	NA	28247741	28239086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_28241657_28242975_28244663_28247139
ES.28063.13	chr6	-	4283	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115321.9	2699	6	-14	-1570	-5	48	multi-exon	FALSE	canonical	3	13	junction_5	13.7927517196533	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCAGTCTGTTTTGCTT	-11	True	NA	47	True	AATACA	-13	NA	28261936	28239877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
ES.28063.14	chr6	-	5548	5	NIC	ENSMUSG00000039841.15	novel	703	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	13	junction_4	15.3948043183407	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTATCTTTTTGTGCA	-6	True	NA	-2	True	ATTAAA	-22	NA	28261931	28239926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
ES.28063.15	chr6	-	4375	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-67	3	-46	-3	multi-exon	FALSE	canonical	2	3	junction_5	17.2232401132888	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTTATCTTTTTGTG	696	False	NA	-4	True	ATTAAA	-20	NA	28261977	28239928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
ES.28063.16	chr6	-	8602	5	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_4	17.8115131305569	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTATCTTTTTGT	-7	True	NA	-5	True	ATTAAA	-19	NA	28261932	28239929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28260836_28261294
ES.28063.17	chr6	-	3988	6	NNC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	745	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	17.9376698598229	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTGTTATCTTTTTGT	1508	False	NA	-5	True	ATTAAA	-19	NA	28261165	28239929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28260950
ES.28063.18	chr6	-	4066	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	322	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.2975408183723	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGTGTTATCTTTTTG	1085	False	NA	-6	True	ATTAAA	-18	NA	28261588	28239930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261294
ES.28063.19	chr6	-	3939	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGTGTTATCTTTTTG	-8	True	NA	-6	True	ATTAAA	-18	NA	28261933	28239930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.2	chr6	-	5293	3	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	4311	6	NA	NA	68	460	multi-exon	FALSE	canonical	0	0	junction_1	11	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATTAACTGTGAAATG	831	False	NA	NA	False	AATAAA	-23	NA	28261842	28210546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28260716_28260836_28261766
ES.28063.20	chr6	-	4011	6	NNC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	647	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.2975408183723	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAGGTGTTATCTTTTT	1410	False	NA	-7	True	ATTAAA	-17	NA	28261263	28239931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261023
ES.28063.21	chr6	-	4155	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	1	64	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.2975408183723	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCAGTGACTATGAGCA	4	True	NA	NA	False	NA	NA	NA	28261921	28240174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261294
ES.28063.22	chr6	-	3629	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-1	8	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGCTTCAACATAGG	2	True	NA	NA	False	AATAAA	-23	NA	28261923	28240230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.23	chr6	-	4939	5	FSM	ENSMUSG00000039841.15	ENSMUST00000155494.2	703	5	10	-4246	1	1	multi-exon	FALSE	canonical	3	22	junction_4	12.1937483982572	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCTAAATGTGCTTCA	4	True	NA	NA	False	AATAAA	-16	NA	28261921	28240237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.24	chr6	-	4374	6	NNC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.2975408183723	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCTAAATGTGCTTCA	-7	True	NA	NA	False	AATAAA	-16	NA	28261932	28240237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261023
ES.28063.25	chr6	-	4575	5	ISM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-36	313	-15	0	intron_retention	FALSE	canonical	3	31	junction_3	8.8423695919137	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGCTAAATGTGCTTC	727	False	NA	NA	False	AATAAA	-15	NA	28261946	28240238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716
ES.28063.26	chr6	-	3947	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115321.9	2699	6	-39	-1209	-30	0	multi-exon	FALSE	canonical	3	13	junction_5	13.7927517196533	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGCTAAATGTGCTTC	0	True	NA	NA	False	AATAAA	-15	NA	28261961	28240238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
ES.28063.27	chr6	-	4009	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-11	313	1	0	multi-exon	FALSE	canonical	2	3	junction_5	17.2232401132888	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGCTAAATGTGCTTC	4	True	NA	NA	False	AATAAA	-15	NA	28261921	28240238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
ES.28063.28	chr6	-	4445	6	NNC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	17.9376698598229	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGCTAAATGTGCTT	-7	True	NA	NA	False	AATAAA	-14	NA	28261932	28240239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28260950
ES.28063.29	chr6	-	3821	5	NIC	ENSMUSG00000039841.15	novel	2699	6	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.8547076349648	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCAGCTAAATGTGCT	-8	True	NA	NA	False	AATAAA	-13	NA	28261933	28240240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28260716_28260836_28261478
ES.28063.3	chr6	-	6323	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	2084	5	NA	NA	-17	-1359	multi-exon	FALSE	canonical	1	1	junction_5	19.4771661183038	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTTTGTGTTTTGGCT	725	False	NA	NA	False	AATGAA	-27	NA	28261948	28212365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28260950
ES.28063.30	chr6	-	3481	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	-2	-150	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTATCCTTCTCAG	-8	True	NA	NA	False	AATAAA	-18	NA	28261933	28240388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.31	chr6	-	3225	6	NIC	ENSMUSG00000039841.15	novel	4311	6	NA	NA	0	-404	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	11.0381157812373	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAATACATCTAT	-6	True	NA	NA	False	AATGAA	-34	NA	28261931	28240642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.32	chr6	-	3349	5	ISM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-26	2307	-5	-785	5prime_fragment	FALSE	canonical	2	3	junction_4	19.2548695139697	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAGTATTATTCAGT	-11	True	NA	NA	False	AATAAA	-21	NA	28261936	28242232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
ES.28063.33	chr6	-	3058	5	NNC	ENSMUSG00000039841.15	novel	2084	5	NA	NA	618	-785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.4496332485451	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAGTATTATTCAGT	1381	False	NA	NA	False	AATAAA	-21	NA	28261292	28242232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261023
ES.28063.34	chr6	-	3765	5	NNC	ENSMUSG00000039841.15	novel	2084	5	NA	NA	-4	-785	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	20.0499376557634	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAGTATTATTCAGT	-1	True	NA	NA	False	AATAAA	-21	NA	28261926	28242232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28260950
ES.28063.4	chr6	-	3482	1	FSM	ENSMUSG00000106990.2	ENSMUST00000201159.2	3798	1	-1048	1364	-1048	-1364	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTATTTTTGTGTTT	NA	False	NA	NA	False	AATGAA	-22	NA	28215852	28212370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28212400_28215900
ES.28063.5	chr6	-	5465	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	-1	-1364	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTATTTTTGTGTTT	14	True	NA	NA	False	AATGAA	-22	NA	28261911	28212370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.6	chr6	-	5871	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	2084	5	NA	NA	290	-1483	multi-exon	FALSE	canonical	1	1	junction_5	19.4771661183038	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGGTTTCTGGATTTGT	1053	False	NA	NA	False	ATTAAA	-13	NA	28261620	28212489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28260950
ES.28063.7	chr6	-	5260	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	2084	5	NA	NA	557	-1483	multi-exon	FALSE	canonical	0	0	junction_5	19.7686620690425	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGGTTTCTGGATTTGT	1320	False	NA	NA	False	ATTAAA	-13	NA	28261353	28212489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261294
ES.28063.8	chr6	-	5388	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	703	5	NA	NA	-22	-1483	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGGTTTCTGGATTTGT	720	False	NA	NA	False	ATTAAA	-13	NA	28261953	28212489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
ES.28063.9	chr6	-	5643	6	Fusion	ENSMUSG00000106990.2_ENSMUSG00000039841.15	novel	2084	5	NA	NA	1	-1484	multi-exon	FALSE	canonical	3	13	junction_5	16.3413585726524	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCGGTTTCTGGATTTG	4	True	NA	NA	False	ATTAAA	-12	NA	28261921	28212490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
ES.28064.1	chr6	+	1733	1	Intergenic	novelGene_23319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCTTTAAGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	28262028	28263761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_28262000_28263800
ES.28065.1	chr6	+	151	1	Intergenic	novelGene_23320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	28403081	28403232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_28403100_28403200
ES.28066.1	chr6	+	1182	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-44	-22	-44	22	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGGAAGCTGAGTTAC	1727	False	NA	39	True	AATAAA	-39	NA	28423514	28426623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ES.28066.2	chr6	+	1484	5	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	1725	junction_3	146.308748883995	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTGTTGTCTGTTGCC	1743	False	NA	16	True	AATAAA	-16	NA	28423530	28426600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28423755_28424288_28424370_28424720_28425244_28425737_28425864_28426070
ES.28066.3	chr6	+	2010	4	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	-14	5	intron_retention	FALSE	canonical	3	1725	junction_2	166.771300488623	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTGTTGCCTGGAAG	-45	True	NA	22	True	AATAAA	-22	NA	28423544	28426606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28424370_28424720_28425244_28425737_28425864_28426070
ES.28066.4	chr6	+	2013	4	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	1725	junction_2	128.261018586665	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTGTTGTCTGTTGCC	-44	True	NA	16	True	AATAAA	-16	NA	28423545	28426600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28424831_28425171_28425244_28425737_28425864_28426070
ES.28066.5	chr6	+	2346	3	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	1725	junction_1	66.5	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGGTGTTGTCTGTTGC	-37	True	NA	15	True	AATAAA	-15	NA	28423552	28426599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28425244_28425737_28425864_28426070
ES.28066.6	chr6	+	1024	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	-2	94	-2	-94	multi-exon	FALSE	canonical	3	1725	junction_4	143.712769091685	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCCAGGTTTTGGGGG	-33	True	NA	-77	True	NA	NA	NA	28423556	28426507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ES.28066.7	chr6	+	818	7	NNC	ENSMUSG00000020440.14	novel	768	7	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_6	727.1757391137	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTGTTGTCTGTTGCC	-28	True	NA	16	True	AATAAA	-16	NA	28423561	28426600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070_28426237_28426530
ES.28066.8	chr6	+	1645	5	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	4	-1	intron_retention	FALSE	canonical	3	1725	junction_3	155.809779859931	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTGTTGTCTGTTGCC	-27	True	NA	16	True	AATAAA	-16	NA	28423562	28426600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ES.28067.1	chr6	-	5476	3	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	8	1117	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGGTTTCCCCTTTAC	-5	True	NA	NA	False	NA	NA	NA	28421715	28414972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28419300_28420283_28421382_28421664
ES.28067.2	chr6	-	4647	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	3	0	3	0	multi-exon	FALSE	canonical	3	46	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAACTCTTGTTTTTAT	-10	True	NA	NA	False	AATAAA	-16	NA	28421720	28416089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28419300_28420283
ES.28067.3	chr6	-	4266	3	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	-44	-510	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	23	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATAGTTCCTTATATT	4163	False	NA	78	True	AATAAA	-19	NA	28424196	28416599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28419300_28420283_28421812_28424158
ES.28067.4	chr6	-	4225	4	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	32	-511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.4527905462721	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATATAGTTCCTTATAT	4239	False	NA	77	True	AATAAA	-18	NA	28424120	28416600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28419300_28420283_28421382_28421664_28421812_28423839
ES.28067.5	chr6	-	5112	1	NIC	ENSMUSG00000029708.10	novel	4650	2	NA	NA	8	-514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATATATAGTTCCTTA	-5	True	NA	74	True	AATAAA	-15	NA	28421715	28416603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_28416600_28421700
ES.28067.6	chr6	-	4442	3	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	18	-591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGTTTTCTTAATG	4225	False	NA	-3	True	ATTAAA	-12	NA	28424134	28416680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28419300_28420283_28421812_28423839
ES.28067.9	chr6	-	3616	3	NNC	ENSMUSG00000029708.10	novel	2859	3	NA	NA	0	-751	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.5	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCGAGATCTGTTTTGT	-13	True	NA	NA	False	AATATA	-19	NA	28421723	28416840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28419300_28420283_28421382_28421664
ES.28068.1	chr6	+	171	1	Intergenic	novelGene_23321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAACAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	28466464	28466635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_28466500_28466600
ES.28069.1	chr6	+	2170	1	Genic_Genomic	ENSMUSG00000001424.15	novel	NA	NA	NA	NA	-580	-6120	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28474557	28476727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_28474600_28476700
ES.28069.2	chr6	+	1521	2	NNC	ENSMUSG00000001424.15	novel	351	4	NA	NA	-580	-6084	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAACCCCCCACCCCCCC	NA	False	NA	NA	False	NA	NA	NA	28474557	28476763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28475986_28476670
ES.2807.1	chr10	+	5360	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-78	1265	-78	-908	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGTACCAATTGTCCA	NA	False	NA	NA	False	AGTAAA	-16	NA	58091240	58140156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.10	chr10	+	6403	22	NIC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	20.4558038047165	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGCATTTTCATGACT	NA	False	NA	3	True	ATTAAA	-13	NA	58091333	58141412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.12	chr10	+	6506	23	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	21.4513190948503	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCATGACTACTGTTC	NA	False	NA	10	True	ATTAAA	-20	NA	58091339	58141419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128587_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.13	chr10	+	6697	24	NNC	ENSMUSG00000038039.14	novel	6230	23	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.1680608174919	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTCATGACTACTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	58091351	58141418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092568_58092727_58093683_58093797_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.15	chr10	+	6472	22	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	330	2	-64	-2	3prime_fragment	FALSE	canonical	3	66	junction_11	11.5301045380168	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCATGACTACTGTTC	NA	False	NA	10	True	ATTAAA	-20	NA	58091648	58141419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.16	chr10	+	6292	22	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	330	182	-64	-172	3prime_fragment	FALSE	canonical	3	66	junction_11	11.5301045380168	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTGAAGTCTGTATA	NA	False	NA	NA	False	AATAAA	-26	NA	58091648	58141239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.17	chr10	+	6334	20	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	2742	1	2348	-1	3prime_fragment	FALSE	canonical	3	66	junction_9	11.9042812196848	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGACTACTGTTCT	NA	False	NA	11	True	ATTAAA	-21	NA	58094060	58141420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.18	chr10	+	4825	18	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-2855	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	23.8472648646022	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGCATTTTCATGACT	NA	False	NA	3	True	ATTAAA	-13	NA	58106412	58141412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126118_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.19	chr10	+	3964	17	NIC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-2062	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.2203426895657	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGACTACTGTTCT	NA	False	NA	11	True	ATTAAA	-21	NA	58107205	58141420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58107529_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.2	chr10	+	6624	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-77	0	-77	0	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGACTACTGTTCTT	NA	False	NA	12	True	ATTAAA	-22	NA	58091241	58141421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.20	chr10	+	3440	15	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	19437	103	-23	-93	3prime_fragment	FALSE	canonical	3	66	junction_4	12.2950545890182	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACTTTGATTACAA	NA	False	NA	-91	True	AATAAA	-18	NA	58110755	58141318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.21	chr10	+	6306	2	NNC	ENSMUSG00000038039.14	novel	545	5	NA	NA	3762	3781	intron_retention	TRUE	non_canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-45	NA	58114540	58120997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58117458_58117608
ES.2807.22	chr10	+	2978	10	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	30347	10	-83	0	3prime_fragment	FALSE	canonical	3	75	junction_4	10.1263621245017	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGCATTTTCATGAC	NA	False	NA	2	True	ATTAAA	-12	NA	58121665	58141411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.23	chr10	+	4329	3	NIC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-3552	-3	intron_retention	FALSE	canonical	3	85	junction_1	9.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTCATGACTACTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	58130679	58141418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58130728_58131909_58134688_58139915
ES.2807.24	chr10	+	1745	3	NNC	ENSMUSG00000038039.14	novel	1952	2	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGACTACTGTTCT	NA	False	NA	11	True	ATTAAA	-21	NA	58134191	58141420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58134230_58134485_58134688_58139915
ES.2807.25	chr10	+	2016	1	Intergenic	novelGene_2137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTAAAAGGAGCAGAGGA	NA	False	NA	NA	False	NA	NA	NA	58137353	58139369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58137400_58139400
ES.2807.26	chr10	+	179	1	Intergenic	novelGene_2138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAATTCCAAA	NA	False	NA	NA	False	NA	NA	NA	58139588	58139767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58139600_58139800
ES.2807.3	chr10	+	6705	24	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-52	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	26.4716562049038	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTCATGACTAC	NA	False	NA	5	True	ATTAAA	-15	NA	58091266	58141414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092641_58092727_58093683_58093797_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.4	chr10	+	6860	22	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-49	4964	-49	-4607	5prime_fragment	FALSE	canonical	3	66	junction_12	11.3577168667961	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTTGGGGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	58091269	58136457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485
ES.2807.5	chr10	+	6515	22	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.8822434738273	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTTTCATGACTACT	NA	False	NA	6	True	ATTAAA	-16	NA	58091269	58141415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58110557_58110659_58110757_58110857_58112401_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.6	chr10	+	6492	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-48	103	-48	-93	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTACTTTGATTACAA	NA	False	NA	-91	True	AATAAA	-18	NA	58091270	58141318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.7	chr10	+	6012	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	-42	577	-42	-220	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGGGTATTATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	58091276	58140844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.8	chr10	+	6449	23	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	3	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.8153407241118	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAAAGACATATATGCT	NA	False	NA	-77	True	AATAAA	-32	NA	58091321	58141332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092641_58092721_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.2807.9	chr10	+	6667	24	NNC	ENSMUSG00000038039.14	novel	6547	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	26.083405555422	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGCATTTTCATGACT	NA	False	NA	3	True	ATTAAA	-13	NA	58091329	58141412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58091394_58091650_58091705_58092641_58092727_58093683_58093824_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ES.28070.1	chr6	+	3509	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	-21	-6	-21	6	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAACACTGTGTTCC	5214	False	NA	36	True	AATAAA	-37	NA	28480325	28888837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.10	chr6	+	3158	21	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	1	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	159.359303148577	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	-6	True	NA	19	True	AATAAA	-20	NA	28480347	28888820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.11	chr6	+	4088	22	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	2	-11	intron_retention	FALSE	canonical	0	0	junction_3	154.981558408451	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	-5	True	NA	19	True	AATAAA	-20	NA	28480348	28888820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.12	chr6	+	3449	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	148.316322665437	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	-5	True	NA	15	True	AATAAA	-16	NA	28480348	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526923_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.13	chr6	+	3349	23	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	-4	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	151.737356002441	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	0	True	NA	15	True	AATAAA	-16	NA	28480353	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.14	chr6	+	3280	22	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	1	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	206.243015411179	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCAGCCTTACTGTCG	5	True	NA	11	True	AATAAA	-12	NA	28480358	28888812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28526051_28526213_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.21	chr6	+	3363	23	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	6	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	152.227591682393	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	10	True	NA	18	True	AATAAA	-19	NA	28480363	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.22	chr6	+	3434	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	6	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	148.314589273289	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	10	True	NA	15	True	AATAAA	-16	NA	28480363	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520249_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.23	chr6	+	3237	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	17	228	6	-228	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTTGTGTTAGTGAA	10	True	NA	50	True	NA	NA	NA	28480363	28888603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.24	chr6	+	3600	25	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.211205955385	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	10	True	NA	19	True	AATAAA	-20	NA	28480363	28888820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28522613_28522760_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.25	chr6	+	3493	25	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	6	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	231.057228210531	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCAGCCTTACTGTCG	10	True	NA	11	True	AATAAA	-12	NA	28480363	28888812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526056_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28750246_28750299_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.26	chr6	+	4147	23	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	7	-15	intron_retention	FALSE	canonical	3	582	junction_3	56.3069362901247	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	11	True	NA	15	True	AATAAA	-16	NA	28480364	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.27	chr6	+	3480	25	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	9	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	195.405769952055	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	13	True	NA	15	True	AATAAA	-16	NA	28480366	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28546987_28547021_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.28	chr6	+	3451	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	10	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	146.624850829958	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCTTACTGTCGTG	14	True	NA	13	True	AATAAA	-14	NA	28480367	28888814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883388_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.29	chr6	+	3263	22	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	10	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	208.146076387825	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	14	True	NA	18	True	AATAAA	-19	NA	28480367	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28526051_28526213_28526907_28527000_28527575_28527735_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.30	chr6	+	3442	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	12	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	148.909647692161	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	16	True	NA	19	True	AATAAA	-20	NA	28480369	28888820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874865_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.31	chr6	+	3433	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	16	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	148.316322665437	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	20	False	NA	18	True	AATAAA	-19	NA	28480373	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526203_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.32	chr6	+	3510	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	19	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	148.883557855197	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	23	False	NA	18	True	AATAAA	-19	NA	28480376	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545613_28626043_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.34	chr6	+	3173	23	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	32486	15	32405	-15	3prime_fragment	FALSE	canonical	3	582	junction_2	55.8626007744829	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	NA	False	NA	15	True	AATAAA	-16	NA	28512832	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.35	chr6	+	2912	23	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	39752	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	151.757860907129	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCAGCCTTACTGTCG	NA	False	NA	11	True	AATAAA	-12	NA	28520179	28888812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233_28888507_28888576
ES.28070.36	chr6	+	2900	21	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	43377	18	-38092	-18	3prime_fragment	FALSE	canonical	3	595	junction_3	53.5149278239259	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGCCTTACTGTCGT	1496	False	NA	12	True	AATAAA	-13	NA	28523723	28888813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.37	chr6	+	2571	18	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	47227	15	-34242	-15	3prime_fragment	FALSE	canonical	3	616	junction_1	53.1911744377043	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	5346	False	NA	15	True	AATAAA	-16	NA	28527573	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.38	chr6	+	2301	16	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	51059	19	-30410	-19	3prime_fragment	FALSE	canonical	3	620	junction_2	52.3703054114532	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCAGCCTTACTGTCG	9178	False	NA	11	True	AATAAA	-12	NA	28531405	28888812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.39	chr6	+	2167	15	NNC	ENSMUSG00000001424.15	novel	718	5	NA	NA	-10926	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.166533398708	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	NA	False	NA	15	True	AATAAA	-16	NA	28550889	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28550959_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.40	chr6	+	2185	15	NNC	ENSMUSG00000001424.15	novel	718	5	NA	NA	-5329	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.166533398708	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	102	False	NA	18	True	AATAAA	-19	NA	28556486	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28556571_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.41	chr6	+	5620	2	Genic_Genomic	ENSMUSG00000103132.2	novel	2915	1	NA	NA	1051	4682	multi-exon	FALSE	non_canonical	0	0	junction_1	0	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28569121	28575667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_28570857_28571782
ES.28070.42	chr6	+	2013	13	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	188208	12	-36353	-12	3prime_fragment	FALSE	canonical	3	623	junction_5	47.8832492167726	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	NA	False	NA	18	True	AATAAA	-19	NA	28668554	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.43	chr6	+	1802	11	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	244558	12	19186	-12	3prime_fragment	FALSE	canonical	3	623	junction_3	51.9749939874936	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	NA	False	NA	18	True	AATAAA	-19	NA	28724904	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.44	chr6	+	1577	9	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	19280	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	240.999967582985	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	NA	False	NA	18	True	AATAAA	-19	NA	28795826	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888115_28888233
ES.28070.45	chr6	+	1643	7	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	399491	12	-204	-12	3prime_fragment	FALSE	canonical	3	669	junction_3	38.5313724991294	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	NA	False	NA	18	True	AATAAA	-19	NA	28879837	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.46	chr6	+	589	1	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	8189	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	757	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACTGTCGTGGTGGA	NA	False	NA	18	True	AATAAA	-19	NA	28888230	28888819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28888200_28888800
ES.28070.5	chr6	+	3464	24	NNC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	148.998927946816	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTTACTGTCGTGGT	-11	True	NA	15	True	AATAAA	-16	NA	28480342	28888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_28480642_28512833_28512984_28520150_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28070.9	chr6	+	3356	23	NIC	ENSMUSG00000001424.15	novel	3482	24	NA	NA	1	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	152.151702244397	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTACTGTCGTGGTGGAG	-6	True	NA	19	True	AATAAA	-20	NA	28480347	28888820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ES.28071.1	chr6	-	5168	4	Antisense	novelGene_ENSMUSG00000001424.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGGACTGCCACTGA	NA	False	NA	NA	False	NA	NA	NA	28656337	28644342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_28645553_28652143_28652682_28652875_28654684_28654725
ES.28072.1	chr6	-	1781	1	Intergenic	novelGene_23322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACCATTTAGCTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	28665951	28664170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28664200_28666000
ES.28073.1	chr6	-	178	1	Intergenic	novelGene_23323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	28673774	28673596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28673600_28673800
ES.28074.1	chr6	-	3704	1	Antisense	novelGene_ENSMUSG00000001424.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28776998	28773294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_28773300_28777000
ES.28075.1	chr6	-	214	1	Intergenic	novelGene_23324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCACGCCAGCCAGGAA	NA	False	NA	NA	False	AAGAAA	-2	NA	28786354	28786140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28786100_28786400
ES.28076.1	chr6	-	5477	1	Antisense	novelGene_ENSMUSG00000103899.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTCTGCTACTTCCTC	NA	False	NA	NA	False	NA	NA	NA	28802888	28797411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_28797400_28802900
ES.28077.1	chr6	-	3971	2	NNC	ENSMUSG00000049939.7	novel	883	2	NA	NA	-524	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCCCTAAAGGGTTAAA	1168	False	NA	NA	False	AATAAA	-21	NA	28832270	28828126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28831714_28831886
ES.28077.2	chr6	-	3629	1	FSM	ENSMUSG00000049939.7	ENSMUST00000062304.7	3615	1	-1371	1357	-1371	-1357	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTCTAACTTGTAAGT	321	False	NA	NA	False	NA	NA	NA	28833117	28829488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_28829500_28833100
ES.28077.3	chr6	-	3584	2	NNC	ENSMUSG00000049939.7	novel	883	2	NA	NA	-1523	-1381	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAATGAAAAC	169	False	NA	NA	False	ATTAAA	-37	NA	28833269	28829512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_28831714_28831886
ES.28078.1	chr6	-	1940	1	Intergenic	novelGene_23325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28840293	28838353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28838400_28840300
ES.28079.1	chr6	-	3521	1	Intergenic	novelGene_23326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTGTTGTGTT	1778	False	NA	NA	False	NA	NA	NA	28927749	28924228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_28924200_28927700
ES.2808.1	chr10	-	5441	15	Antisense	novelGene_ENSMUSG00000038039.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCCCAAAAAACCAACC	NA	False	NA	NA	False	NA	NA	NA	58129226	58103201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_58103892_58105081_58107532_58108156_58108232_58110559_58110657_58110755_58110854_58112396_58112516_58114604_58114772_58116411_58116517_58117176_58117342_58121745_58121865_58121953_58122033_58122963_58123100_58124452_58124575_58126119_58126299_58128386
ES.28080.1	chr6	-	4173	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	299	-7	299	7	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTCATGATGTTTG	-26	True	NA	3	True	NA	NA	NA	29164706	29123567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.11	chr6	-	4872	5	NNC	ENSMUSG00000029701.16	novel	1923	12	NA	NA	-813	-1	intron_retention	FALSE	canonical	0	0	junction_4	107.799292669294	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	-5	True	NA	NA	NA	29132114	29123575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29132048
ES.28080.12	chr6	-	3495	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	636	334	-636	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTTGCCCTTACATA	9	True	NA	NA	False	ATTAAA	-20	NA	29164671	29124210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.14	chr6	-	5074	18	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	347	128	intron_retention	FALSE	canonical	0	0	junction_5	55.2288726455866	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTTAACATTTTTAAAT	22	True	NA	-15	True	AATATA	-33	NA	29164658	29125012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131771_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.17	chr6	-	2750	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	275	1440	275	126	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTTTAACATTTTTAA	283	False	NA	-17	True	AATATA	-31	NA	29164730	29125014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.18	chr6	-	4332	9	ISM	ENSMUSG00000029701.16	ENSMUST00000169214.8	1923	12	12659	-124	10418	124	3prime_fragment	FALSE	canonical	3	180	junction_7	24.0178969728825	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	NA	False	NA	-19	True	AATATA	-29	NA	29142431	29125016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551
ES.28080.19	chr6	-	2679	19	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	334	124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.9730442551913	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	9	True	NA	-19	True	AATATA	-29	NA	29164671	29125016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135552_29137573_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.2	chr6	-	6033	18	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	313	3	intron_retention	FALSE	canonical	3	173	junction_12	24.3074311903308	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	-12	True	NA	-1	True	NA	NA	NA	29164692	29123571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.20	chr6	-	4583	18	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	318	124	intron_retention	FALSE	canonical	3	173	junction_12	24.3074311903308	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	-7	True	NA	-19	True	AATATA	-29	NA	29164687	29125016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.21	chr6	-	2644	19	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	325	121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.0481907029803	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACCTTTTTAACATT	0	True	NA	-22	True	AATATA	-26	NA	29164680	29125019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128424_29128685_29131265_29131341_29131625_29131776_29135406_29135512_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.22	chr6	-	1151	6	NNC	ENSMUSG00000029701.16	novel	1923	12	NA	NA	-809	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.6565409995664	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACCTTTTTAACATT	NA	False	NA	-22	True	AATATA	-26	NA	29132110	29125019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29132048
ES.28080.24	chr6	-	5068	18	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	334	118	intron_retention	TRUE	canonical	0	0	junction_16	72.1746727807162	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGAACCTTTTTAAC	9	True	NA	-25	True	AATATA	-23	NA	29164671	29125022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29154888_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159741_29160035_29160195_29164489
ES.28080.25	chr6	-	5240	17	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	303	112	intron_retention	FALSE	canonical	3	179	junction_15	24.1544509355936	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTCTAAATGAACCTT	-22	True	NA	-31	True	AATATA	-17	NA	29164702	29125028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.26	chr6	-	7324	8	NIC	ENSMUSG00000029701.16	novel	1923	12	NA	NA	9945	62	intron_retention	FALSE	canonical	3	180	junction_6	25.2974145649999	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTTTGGATGTGTC	NA	False	NA	-17	True	NA	NA	NA	29142904	29125078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29125524_29127796_29127900_29128427_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551
ES.28080.27	chr6	-	2081	15	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	1686	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.946617408954	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGACTTTTTGGATG	6769	False	NA	-21	True	NA	NA	NA	29158244	29125082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155038_29155189_29157066_29157139_29158168
ES.28080.28	chr6	-	2732	18	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	310	12	intron_retention	FALSE	canonical	0	0	junction_4	54.6865240891668	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATTGTAAAGATGCAT	-15	True	NA	-67	True	AAAAAG	-12	NA	29164695	29125128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131339_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.29	chr6	-	2576	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	334	1555	334	11	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAATTGTAAAGATGCA	9	True	NA	-68	True	AAAAAG	-11	NA	29164671	29125129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.32	chr6	-	3308	8	ISM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	313	28871	313	4233	5prime_fragment	FALSE	canonical	3	173	junction_1	20.2545031526124	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTACCCTTTGCCAT	-12	True	NA	NA	False	ATTAAA	-23	NA	29164692	29152445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.33	chr6	-	1166	7	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	334	1979	intron_retention	FALSE	canonical	3	179	junction_5	19.0416210794494	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACACCAGCTCTGCCCAG	9	True	NA	NA	False	AATAAA	-12	NA	29164671	29154699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.34	chr6	-	3451	1	NIC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	319	-4147	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACTGACTGCTCTTTCA	-6	True	NA	NA	False	NA	NA	NA	29164686	29161235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29161200_29164700
ES.28080.4	chr6	-	7226	12	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	-1475	1	intron_retention	FALSE	canonical	0	0	junction_5	67.0948508327164	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	8448	False	NA	-3	True	NA	NA	NA	29156565	29123573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131771_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29154893_29155025
ES.28080.5	chr6	-	4084	19	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	343	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	51.3064203139539	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	18	True	NA	-3	True	NA	NA	NA	29164662	29123573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127861_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28080.7	chr6	-	5931	7	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	-8105	0	intron_retention	FALSE	canonical	0	0	junction_4	89.0438406379439	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	-4	True	NA	NA	NA	29139406	29123574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29127900_29128427_29128685_29131265_29131341_29131625_29131771_29135406_29135566_29137577_29137643_29138501
ES.28080.8	chr6	-	4130	19	NNC	ENSMUSG00000029701.16	novel	4465	19	NA	NA	343	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.1912764607408	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	18	True	NA	-4	True	NA	NA	NA	29164662	29123574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154744_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ES.28081.1	chr6	-	3494	6	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5299310869258	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTCTGACCTTCTTGG	72	False	NA	NA	False	AATAAA	-16	NA	29179581	29169228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29171568_29172435_29172519_29176440_29176567_29176901_29177007_29177115_29177831_29179455
ES.28081.2	chr6	-	3863	5	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	622	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5.53962995154008	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	692	False	NA	NA	False	AATAAA	-15	NA	29178961	29169229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29178382
ES.28081.3	chr6	-	3685	5	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	161	1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	5.1234753829798	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	231	False	NA	NA	False	AATAAA	-15	NA	29179422	29169229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179021
ES.28081.4	chr6	-	3524	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	-112	-1	-112	1	multi-exon	FALSE	canonical	3	12	junction_2	1.4790199457749	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTCTGACCTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	29179695	29169229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
ES.28081.5	chr6	-	3428	6	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	6.21610810716802	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTTCTGACCTTCTT	132	False	NA	NA	False	AATAAA	-14	NA	29179521	29169230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177322_29177676_29177831_29179021
ES.28081.6	chr6	-	3193	6	NNC	ENSMUSG00000079654.4	novel	3411	5	NA	NA	196	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.49307323229917	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAATGTTCTGACCTTC	266	False	NA	NA	False	AATAAA	-12	NA	29179387	29169232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177322_29177775_29177831_29179021
ES.28082.1	chr6	+	1775	1	Antisense	novelGene_ENSMUSG00000003500.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCCATTCCAGCCCT	3652	False	NA	NA	False	NA	NA	NA	29216068	29217843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_29216100_29217800
ES.28083.10	chr6	-	1943	11	NIC	ENSMUSG00000003500.14	novel	2437	14	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	102.260696262054	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	24	True	NA	-5	True	AATAAA	-15	NA	29212241	29200439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29201219_29202664_29202809_29203100_29203246_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ES.28083.11	chr6	-	2576	15	NNC	ENSMUSG00000003500.14	novel	2600	15	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.6445327720359	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-2	True	NA	-5	True	AATAAA	-15	NA	29216320	29200439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29201242_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ES.28083.15	chr6	-	2520	15	NNC	ENSMUSG00000003500.14	novel	2580	15	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.4228068134952	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTTATCAATGCCTCT	-2	True	NA	-17	True	AATAAA	-3	NA	29216320	29200451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205073_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
ES.28083.16	chr6	-	2238	15	NNC	ENSMUSG00000003500.14	novel	2580	15	NA	NA	21	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.7263791738281	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCAGTTATCAATGCCT	-10	True	NA	-19	True	AATAAA	-1	NA	29212275	29200453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29200600_29200759_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ES.28083.17	chr6	-	2297	14	NIC	ENSMUSG00000003500.14	novel	2600	15	NA	NA	-9	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	75.1653010717519	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCAGTTATCAATGCCT	-1	True	NA	-19	True	AATAAA	-1	NA	29216285	29200453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ES.28083.18	chr6	-	2472	15	NNC	ENSMUSG00000003500.14	novel	2600	15	NA	NA	11	-16	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_4	76.0289955429197	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCAAGCAGTTATCA	-1	True	NA	-25	True	ATTAAA	-8	NA	29216319	29200459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203186_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ES.28083.4	chr6	-	2583	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	17	0	-5	0	multi-exon	TRUE	canonical	1	64	junction_14	59.8544152123146	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	2	True	NA	-1	True	AATAAA	-19	NA	29216346	29200435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ES.28083.6	chr6	-	2525	15	NNC	ENSMUSG00000003500.14	novel	2600	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	71.7263791738281	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	-13	True	NA	-2	True	AATAAA	-18	NA	29216331	29200436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216112
ES.28083.7	chr6	-	2803	13	NIC	ENSMUSG00000003500.14	novel	2437	14	NA	NA	23	-1	intron_retention	FALSE	canonical	1	70	junction_9	48.3718237544682	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGATCCTGTTTCT	-8	True	NA	-3	True	AATAAA	-17	NA	29212273	29200437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ES.28083.8	chr6	-	3961	10	NNC	ENSMUSG00000003500.14	novel	2437	14	NA	NA	17	-3	intron_retention	FALSE	canonical	0	0	junction_4	85.8863733999898	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-14	True	NA	-5	True	AATAAA	-15	NA	29212279	29200439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203268_29203347_29205250_29206064_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ES.28083.9	chr6	-	6366	13	NIC	ENSMUSG00000003500.14	novel	2580	15	NA	NA	10	-3	intron_retention	FALSE	canonical	1	1	junction_6	76.2861935957833	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGATCCTGTTT	-2	True	NA	-5	True	AATAAA	-15	NA	29216320	29200439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ES.28084.1	chr6	+	154	1	Intergenic	novelGene_23327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGGGGCTATAAGGAA	NA	False	NA	NA	False	AATAAA	-6	NA	29241225	29241379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29241200_29241400
ES.28085.1	chr6	+	176	1	Intergenic	novelGene_23328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTACTTTTTCT	6851	False	NA	5	True	NA	NA	NA	29255504	29255680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29255500_29255700
ES.28086.1	chr6	+	961	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	20	1	20	-1	multi-exon	FALSE	canonical	3	124	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGTCCTGTTGACAT	21	False	NA	13	True	AATAAA	-20	NA	29272644	29275444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29272810_29274648
ES.28087.1	chr6	-	189	1	Intergenic	novelGene_23329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCCAGCACTAGAGAAGC	5192	False	NA	NA	False	NA	NA	NA	29275840	29275651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29275700_29275800
ES.28088.1	chr6	+	329	1	Intergenic	novelGene_23330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAAACATGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	29298596	29298925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29298600_29298900
ES.28089.1	chr6	-	183	1	Intergenic	novelGene_23331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTTTTTAATGAAT	NA	False	NA	NA	False	NA	NA	NA	29310628	29310445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29310400_29310600
ES.2809.1	chr10	-	5578	1	Intergenic	novelGene_2139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAACAGAATAAAA	NA	False	NA	NA	False	NA	NA	NA	58153249	58147671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58147700_58153200
ES.28090.1	chr6	+	175	1	Intergenic	novelGene_23332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	29346736	29346911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29346700_29346900
ES.28091.1	chr6	+	3238	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	-10	1	-10	-1	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTGTCTTTTATTCT	NA	False	NA	117	True	AATAAA	-21	NA	29348094	29376673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.10	chr6	+	3036	8	NNC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	324.23259476833	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	17	False	NA	110	True	AATAAA	-14	NA	29348135	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397_29375404_29375557
ES.28091.11	chr6	+	2993	6	NIC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	21	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	374.656429278879	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	-1	True	NA	110	True	AATAAA	-14	NA	29348138	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29348208_29356469_29356697_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.12	chr6	+	3331	8	NNC	ENSMUSG00000029767.17	novel	1670	7	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.988732308171	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	0	True	NA	110	True	AATAAA	-14	NA	29348139	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356518_29356697_29361292_29361487_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.13	chr6	+	3054	8	NNC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	324.23259476833	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	0	True	NA	110	True	AATAAA	-14	NA	29348139	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397_29374561_29374692
ES.28091.14	chr6	+	3144	8	NNC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	324.23259476833	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	1	True	NA	110	True	AATAAA	-14	NA	29348140	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397_29374547_29374587
ES.28091.15	chr6	+	2405	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	37	787	24	-241	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCACCTGTTTTGGTCTCG	2	True	NA	NA	False	ATTAAA	-33	NA	29348141	29375887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.17	chr6	+	1229	4	NNC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	375.502330219135	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	2	True	NA	110	True	AATAAA	-14	NA	29348141	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361558_29361673_29375844
ES.28091.2	chr6	+	3226	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	-13	-543	0	0	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	NA	False	NA	115	True	AATAAA	-19	NA	29348104	29376671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.20	chr6	+	2961	8	NNC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	38	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	324.23259476833	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	4	True	NA	110	True	AATAAA	-14	NA	29348155	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397_29375644_29375852
ES.28091.22	chr6	+	3147	7	NNC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	47	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	408.076245599057	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	0	True	NA	110	True	AATAAA	-14	NA	29348164	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356479_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374401
ES.28091.23	chr6	+	1251	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	59	1360	59	-256	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTCTCTAGTTGGGGC	-3	True	NA	NA	False	NA	NA	NA	29348176	29374768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.24	chr6	+	4871	6	ISM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	78	8	65	-5	intron_retention	FALSE	canonical	3	608	junction_2	166.107675921373	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	3	True	NA	110	True	AATAAA	-14	NA	29348182	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469
ES.28091.25	chr6	+	205	1	Intergenic	novelGene_23334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	687	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTCAGAAGATGTAGTG	5825	False	NA	NA	False	NA	NA	NA	29354004	29354209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29354000_29354200
ES.28091.26	chr6	+	3879	1	NIC	ENSMUSG00000029767.17	novel	611	5	NA	NA	-692	-8705	mono-exon	FALSE	NA	NA	NA	NA	NA	760	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAACTCTGCATCAGTCTG	NA	False	NA	NA	False	NA	NA	NA	29360767	29364646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29360800_29364600
ES.28091.27	chr6	+	2892	5	ISM	ENSMUSG00000029767.17	ENSMUST00000174096.7	1670	7	5088	-1642	98	-5	3prime_fragment	FALSE	canonical	3	303	junction_1	282.372980293795	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	140	False	NA	110	True	AATAAA	-14	NA	29361557	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.28	chr6	+	4968	2	ISM	ENSMUSG00000029767.17	ENSMUST00000172607.2	648	3	-2581	443	-2581	-5	5prime_fragment	FALSE	canonical	3	898	junction_1	0	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	3845	False	NA	110	True	AATAAA	-14	NA	29369970	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29372670_29374397
ES.28091.29	chr6	+	2052	3	NNC	ENSMUSG00000029767.17	novel	648	3	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	449	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	6416	False	NA	110	True	AATAAA	-14	NA	29372541	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29372670_29374397_29375599_29375943
ES.28091.5	chr6	+	4113	7	NIC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	0	-4	intron_retention	FALSE	canonical	3	15	junction_3	358.045931255878	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	111	True	AATAAA	-15	NA	29348117	29376667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29348208_29356469_29356697_29361292_29361487_29361558_29361753_29366038_29366977_29372469_29372670_29374397
ES.28091.6	chr6	+	3101	6	NNC	ENSMUSG00000029767.17	novel	3229	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	329.007355540875	884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	-1	True	NA	110	True	AATAAA	-14	NA	29348117	29376666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366183_29372492_29372670_29374397
ES.28091.8	chr6	+	3403	8	NIC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	350.870637246311	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGGCTTATGTGTCTTT	-1	True	NA	111	True	AATAAA	-15	NA	29348117	29376667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29348208_29356469_29356697_29361292_29361487_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ES.28091.9	chr6	+	1637	1	NIC	ENSMUSG00000029767.17	novel	673	5	NA	NA	0	-23597	mono-exon	FALSE	NA	NA	NA	NA	NA	688	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAATAATCCTG	-1	True	NA	NA	False	NA	NA	NA	29348117	29349754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29348100_29349800
ES.28092.1	chr6	-	160	1	Intergenic	novelGene_23333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	29350736	29350576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29350600_29350700
ES.28093.1	chr6	-	966	1	Intergenic	novelGene_23335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29368068	29367102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29367100_29368100
ES.28094.1	chr6	-	172	1	Intergenic	novelGene_23336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACAAAGAAATGA	9962	False	NA	NA	False	NA	NA	NA	29370556	29370384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29370400_29370600
ES.28095.1	chr6	+	302	1	Intergenic	novelGene_23337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATTCTCCAGACAC	NA	False	NA	NA	False	AATAAA	-7	NA	29385147	29385449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29385100_29385400
ES.28096.1	chr6	+	174	1	Intergenic	novelGene_23338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	29390685	29390859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29390700_29390900
ES.28097.1	chr6	+	439	1	Intergenic	novelGene_23339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	29391449	29391888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29391400_29391900
ES.28098.1	chr6	+	3870	18	FSM	ENSMUSG00000029769.18	ENSMUST00000096084.13	3894	18	23	1	23	-1	multi-exon	FALSE	canonical	0	0	junction_15	2.99249349222986	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACATTGTGTGACTTTTT	-21	True	NA	NA	False	ATTAAA	-18	NA	29396596	29426950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29396742_29397477_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29426623
ES.28098.2	chr6	+	3211	15	ISM	ENSMUSG00000029769.18	ENSMUST00000115275.8	3279	16	2	8537	2	-8441	5prime_fragment	FALSE	canonical	1	1	junction_4	2.63512382081382	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCATTGTCTTTTTTCC	13	True	NA	NA	False	NA	NA	NA	29396630	29418415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29396742_29397477_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930
ES.28098.3	chr6	+	1588	9	NIC	ENSMUSG00000029769.18	novel	1703	10	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	3.20156211871642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTTTTTCTT	38	True	NA	NA	False	ATTAAA	-21	NA	29396655	29426953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29396742_29397477_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29426623
ES.28098.4	chr6	+	2788	13	NIC	ENSMUSG00000029769.18	novel	3169	15	NA	NA	319	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	3.15788255358274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACATTGTGTGACTTT	39	False	NA	NA	False	ATTAAA	-16	NA	29399243	29426948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29426623
ES.28098.5	chr6	+	2940	14	NNC	ENSMUSG00000029769.18	novel	3356	15	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3.18651002726277	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACATTGTGTGACTTT	-21	True	NA	NA	False	ATTAAA	-16	NA	29402875	29426948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29403025_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29422035_29422097_29426623
ES.28098.6	chr6	+	1906	10	NIC	ENSMUSG00000029769.18	novel	3356	15	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.33333333333333	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTGTGTGACTTTTTC	1	True	NA	NA	False	ATTAAA	-19	NA	29402897	29426951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29403025_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29426623
ES.28098.7	chr6	+	2846	13	NIC	ENSMUSG00000029769.18	novel	3356	15	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.64049658629248	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTGTGTGACTTTTTC	15	True	NA	NA	False	ATTAAA	-19	NA	29402911	29426951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29403025_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29426623
ES.28098.8	chr6	+	6732	1	NIC	ENSMUSG00000029769.18	novel	3894	18	NA	NA	5269	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTGTGTGACTTTTTC	222	False	NA	NA	False	ATTAAA	-19	NA	29420219	29426951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29420200_29427000
ES.28098.9	chr6	+	2995	1	NIC	ENSMUSG00000029769.18	novel	1703	10	NA	NA	5909	-3002	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTACCCTCAAATGGTG	862	False	NA	NA	False	ATTAAA	-30	NA	29420859	29423854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29420900_29423900
ES.28099.1	chr6	+	9170	48	FSM	ENSMUSG00000068699.13	ENSMUST00000065090.8	9038	48	-127	-5	-107	5	multi-exon	TRUE	canonical	0	0	junction_1	2.66442111579601	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCTCTGTGTGCGTA	-1	True	NA	NA	False	AATAAA	-23	NA	29433147	29461887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29433813_29438462_29438712_29440170_29440269_29440395_29440547_29440636_29440756_29440875_29440954_29441097_29441261_29441432_29441634_29442880_29443019_29443372_29443500_29443658_29443796_29444003_29444198_29444295_29444410_29445006_29445151_29445374_29445499_29445639_29445801_29446049_29446141_29446228_29446399_29446605_29446724_29446806_29447070_29447393_29447992_29448556_29448731_29448832_29448996_29449234_29449396_29450564_29450733_29450812_29450937_29451370_29451528_29451602_29451793_29451995_29452020_29452131_29452380_29452797_29452897_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ES.28099.3	chr6	+	4765	25	ISM	ENSMUSG00000068699.13	ENSMUST00000101617.9	8939	47	15576	6	15576	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	2.67706306736817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAAGGCTTAGCTCTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	29448850	29461876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29448996_29449234_29449396_29450564_29450733_29450812_29450937_29451370_29451528_29451602_29451793_29451995_29452020_29452131_29452380_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ES.28099.4	chr6	+	4771	25	NNC	ENSMUSG00000068699.13	novel	9038	48	NA	NA	16878	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.54405625374562	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTAGCTCTTCTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	29450152	29461880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29450362_29450564_29450733_29450812_29450937_29451370_29451528_29451602_29451793_29451995_29452020_29452131_29452380_29452797_29452897_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ES.28099.5	chr6	+	3608	18	NNC	ENSMUSG00000068699.13	novel	9038	48	NA	NA	19717	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.80508682766267	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTAGCTCTTCTCTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	29452991	29461882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29453046_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ES.281.1	chr1	+	4288	8	Antisense	novelGene_ENSMUSG00000109510.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36569712	36575997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36570725_36570804_36570905_36570991_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371
ES.281.2	chr1	+	3887	1	Antisense	novelGene_ENSMUSG00000109510.2_AS_novelGene_ENSMUSG00000067653.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36572140	36576027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36572100_36576000
ES.281.3	chr1	+	2941	2	Antisense	novelGene_ENSMUSG00000109510.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36572911	36576027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36573197_36573371
ES.2810.1	chr10	+	4340	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	-13	0	-13	0	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTACATATCATTTAG	NA	False	NA	10	True	AATAAA	-19	NA	58159274	58260513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.10	chr10	+	1579	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	115	2633	115	275	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACTGTTATAAAGAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	58159402	58257880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.11	chr10	+	4121	10	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	125	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	86.5345146298413	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGTGTGTTACATAT	NA	False	NA	3	True	AATAAA	-12	NA	58159412	58260506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58234842_58234929_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.13	chr10	+	3948	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	127	252	127	-252	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTTTTGTGTCA	NA	False	NA	NA	False	AATATA	-20	NA	58159414	58260261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.14	chr10	+	4040	9	NIC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	128	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	93.5446918590253	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATAGTGTGTTACATA	NA	False	NA	2	True	AATAAA	-11	NA	58159415	58260505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.15	chr10	+	4377	11	NIC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	133	-6	combination_of_known_junctions	TRUE	canonical	0	0	junction_10	109.248157879206	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGTGTGTTACATATC	NA	False	NA	4	True	AATAAA	-13	NA	58159420	58260507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58254468_58254658_58257275
ES.2810.16	chr10	+	3378	11	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	137	-856	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.80936288547	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCTTTTGACAA	NA	False	NA	NA	False	AATATA	-30	NA	58159424	58259657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58198254_58198299_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.17	chr10	+	4346	10	FSM	ENSMUSG00000019920.19	ENSMUST00000238939.2	4351	10	1	4	1	-4	multi-exon	FALSE	canonical	2	8	junction_1	82.3939647795806	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTGTGTTACATATCAT	NA	False	NA	6	True	AATAAA	-15	NA	58207276	58260509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58207522_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.18	chr10	+	4666	1	NIC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	-3266	-3536	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGTGAAAAGATAGCCAT	NA	False	NA	NA	False	NA	NA	NA	58249198	58253864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58249200_58253900
ES.2810.19	chr10	+	4319	3	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	668	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGTGTTACATATCATT	NA	False	NA	7	True	AATAAA	-16	NA	58253132	58260510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58253756_58253835_58254297_58257275
ES.2810.2	chr10	+	4182	11	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	72	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.1745804860351	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATAGTGTGTTACATA	NA	False	NA	2	True	AATAAA	-11	NA	58159359	58260505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58245901_58245965_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.3	chr10	+	3425	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	74	828	74	-828	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTTCCGTGTGCCT	NA	False	NA	NA	False	TTTAAA	-29	NA	58159361	58259685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.4	chr10	+	4295	11	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	83	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	106.018866245589	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGTGTTACATATCATT	NA	False	NA	7	True	AATAAA	-16	NA	58159370	58260510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58186868_58186923_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.5	chr10	+	4079	9	NIC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	93	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	93.8469498705206	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTGTGTTACATATCA	NA	False	NA	5	True	AATAAA	-14	NA	58159380	58260508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.6	chr10	+	4268	11	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	94	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.415976244171	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGTGTGTTACATAT	NA	False	NA	3	True	AATAAA	-12	NA	58159381	58260506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58196023_58196066_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.8	chr10	+	4419	12	NNC	ENSMUSG00000019920.19	novel	4327	10	NA	NA	113	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.476974085388	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGTGTTACATATCATT	NA	False	NA	7	True	AATAAA	-16	NA	58159400	58260510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58159510_58186868_58186923_58234523_58234678_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.2810.9	chr10	+	1304	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	113	2910	113	-2	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAACAAAAACAAACAA	NA	False	NA	NA	False	ATTAAA	-10	NA	58159400	58257603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ES.28100.1	chr6	-	563	2	Antisense	novelGene_ENSMUSG00000068699.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGGACACCTAGATCCAG	NA	False	NA	NA	False	AGTAAA	-17	NA	29449990	29448566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_29449063_29449923
ES.28101.1	chr6	+	702	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	4	-3	4	3	multi-exon	FALSE	canonical	3	1924	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGTATGGATACGTGA	NA	False	NA	40	True	ATTAAA	-22	NA	29467720	29470514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29467974_29470065
ES.28101.2	chr6	+	2764	1	NIC	ENSMUSG00000004285.13	novel	703	2	NA	NA	28	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTACTGGTATGGAT	-4	True	NA	34	True	ATTAAA	-16	NA	29467744	29470508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29467700_29470500
ES.28101.4	chr6	+	3567	2	FSM	ENSMUSG00000004285.13_ENSMUSG00000090685.2	ENSMUST00000004396.13	703	2	87	-2951	87	-2	multi-exon	FALSE	canonical	3	1924	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCATTGCTCTGTTCG	12	True	NA	NA	False	AAGAAA	-18	NA	29467803	29473462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29467974_29470065
ES.28102.1	chr6	-	4868	5	NIC	ENSMUSG00000059022.16	novel	4775	37	NA	NA	-4181	0	intron_retention	FALSE	canonical	1	2	junction_4	2.69258240356725	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTATGTGTACTT	NA	False	NA	NA	False	AATAAA	-18	NA	29489152	29482035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29482462_29482632_29485175_29485416_29485560_29487179_29487280_29487495
ES.28102.2	chr6	-	3237	16	NIC	ENSMUSG00000059022.16	novel	4885	38	NA	NA	34	0	intron_retention	TRUE	canonical	1	1	junction_12	1.81352940116473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTATGTGTACTT	NA	False	NA	NA	False	AATAAA	-18	NA	29495879	29482035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29482462_29482632_29482940_29483928_29484716_29484809_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489150_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756
ES.28102.3	chr6	-	2942	3	NIC	ENSMUSG00000059022.16	novel	4885	38	NA	NA	-257	0	intron_retention	FALSE	canonical	0	0	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTATGTGTACTT	NA	False	NA	NA	False	AATAAA	-18	NA	29485228	29482035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29482462_29482632_29484922_29485001
ES.28102.4	chr6	-	5395	32	NIC	ENSMUSG00000059022.16	novel	4885	38	NA	NA	-28	0	intron_retention	TRUE	canonical	0	0	junction_14	2.09404288607967	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTATGTGTACTT	6	True	NA	NA	False	AATAAA	-18	NA	29507979	29482035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29482462_29482632_29482940_29483928_29484716_29484809_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29504231_29504309_29504397_29504567_29505636_29505801_29507855
ES.28102.5	chr6	-	4898	38	FSM	ENSMUSG00000059022.16	ENSMUST00000101614.10	4885	38	-14	1	-12	-1	multi-exon	FALSE	canonical	0	0	junction_5	1.92367131343505	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCTTGTATGTGTACT	-3	True	NA	NA	False	AATAAA	-17	NA	29507963	29482036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29484809_29484922_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498785_29498880_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
ES.28102.6	chr6	-	5168	35	NNC	ENSMUSG00000059022.16	novel	4775	37	NA	NA	-27	-1	intron_retention	FALSE	canonical	0	0	junction_4	2.0512465616662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCTTGTATGTGTACT	7	False	NA	NA	False	AATAAA	-17	NA	29507978	29482036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490587_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
ES.28102.7	chr6	-	4580	34	NIC	ENSMUSG00000059022.16	novel	4775	37	NA	NA	-1664	-2	intron_retention	FALSE	canonical	0	0	junction_4	2.04225338733264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGTGTAC	3498	False	NA	NA	False	AATAAA	-16	NA	29504487	29482037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498785_29498880_29498955_29499036_29499123_29499218_29501200_29501309_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397
ES.28102.9	chr6	-	4688	33	NNC	ENSMUSG00000059022.16	novel	4885	38	NA	NA	-17	48	intron_retention	FALSE	canonical	0	0	junction_21	1.79843682124227	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGATGTTGGTTTTGAT	-8	True	NA	NA	False	AATATA	-23	NA	29507968	29483643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29484094_29484613_29484716_29484809_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498271_29498358_29498427_29498514_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
ES.28103.1	chr6	-	181	1	Intergenic	novelGene_23340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGAGAGGGAGAG	NA	False	NA	NA	False	NA	NA	NA	29514125	29513944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29513900_29514100
ES.28104.1	chr6	+	2527	8	NIC	ENSMUSG00000029771.13	novel	2189	9	NA	NA	-35	-7	intron_retention	FALSE	canonical	3	5	junction_6	3.37457480314792	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGGTCTGCCCATT	1	True	NA	NA	False	AATAAA	-5	NA	29526671	29537311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29526774_29531124_29531331_29533950_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
ES.28104.2	chr6	+	1579	5	ISM	ENSMUSG00000029771.13	ENSMUST00000163511.7	2241	9	5757	7	3791	-7	3prime_fragment	FALSE	canonical	3	5	junction_3	3.90512483795333	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGGTCTGCCCATT	962	False	NA	NA	False	AATAAA	-5	NA	29535037	29537311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
ES.28105.1	chr6	+	9378	10	Antisense	novelGene_ENSMUSG00000012535.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAACTAAATTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	29566367	29601742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_29568992_29571033_29571127_29572584_29572692_29575003_29578603_29579520_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589227_29599536
ES.28106.1	chr6	+	173	1	Intergenic	novelGene_23342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29602949	29603122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29602900_29603100
ES.28107.1	chr6	+	173	1	Intergenic	novelGene_23343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29604332	29604505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29604300_29604500
ES.28108.1	chr6	+	3486	13	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-126214	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.2226663410891	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	29609287	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29609465_29609721_29610005_29753468_29753675_29754320_29754531_29754776_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.10	chr6	+	176	2	Genic_Genomic	ENSMUSG00000001763.15	novel	3558	4	NA	NA	-2379	-1	multi-exon	TRUE	canonical	0	0	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	29691841	29714820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_29691986_29714788
ES.28108.11	chr6	+	171	1	Intergenic	novelGene_23355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	29691841	29692012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29691800_29692000
ES.28108.12	chr6	+	2023	8	FSM	ENSMUSG00000001763.15	ENSMUST00000046750.14	1994	8	-31	2	-31	0	multi-exon	FALSE	canonical	3	27	junction_2	5.15474815790535	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	1	True	NA	7	True	AATAAA	-16	NA	29694189	29718556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29694544_29709939_29709998_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
ES.28108.14	chr6	+	2098	8	NNC	ENSMUSG00000001763.15	novel	1994	8	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.032142367772	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTAAGCTGTCCTACAT	1	True	NA	4	True	AATAAA	-13	NA	29694189	29718553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29694544_29709939_29710076_29710585_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
ES.28108.15	chr6	+	1325	8	FSM	ENSMUSG00000001763.15	ENSMUST00000115250.4	1977	8	-34	686	-22	-686	multi-exon	FALSE	canonical	3	18	junction_2	7.38172039015075	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATTTGAGTTTGTGTT	10	False	NA	NA	False	NA	NA	NA	29694198	29717870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29694544_29709939_29709998_29710588_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
ES.28108.16	chr6	+	175	1	Intergenic	novelGene_23356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTTCC	NA	False	NA	NA	False	NA	NA	NA	29730378	29730553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29730400_29730600
ES.28108.17	chr6	+	4032	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	-257	4	-66	-4	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCGTGTTTCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	29735435	29761360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.18	chr6	+	3389	13	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.0581268697846	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	-13	True	NA	NA	False	NA	NA	NA	29735496	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29735568_29736146_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.19	chr6	+	3898	12	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	59	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.7357840081159	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	51	False	NA	NA	False	NA	NA	NA	29735560	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755178_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.2	chr6	+	274	1	Intergenic	novelGene_23344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29610157	29610431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29610200_29610400
ES.28108.21	chr6	+	3781	13	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-63	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	25.0581268697846	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCTCATGCGTGTTTCT	9	False	NA	NA	False	NA	NA	NA	29735629	29761355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850_29760942_29760993
ES.28108.22	chr6	+	3751	12	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-63	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	25.3178145884907	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGCGTGTTTCTTTTC	9	False	NA	NA	False	NA	NA	NA	29735629	29761359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754776_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.23	chr6	+	3911	13	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-40	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.4451642882838	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	5	True	NA	NA	False	NA	NA	NA	29735652	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755485_29755606_29756779_29756873_29757255_29757365_29758050_29758154_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.24	chr6	+	5119	10	NIC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	-33	-7	intron_retention	FALSE	canonical	3	65	junction_3	9.45163125250522	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	12	True	NA	NA	False	NA	NA	NA	29735659	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29759014_29759482_29759618_29759850
ES.28108.25	chr6	+	4758	10	NNC	ENSMUSG00000001761.8	novel	3779	12	NA	NA	207	-7	intron_retention	FALSE	canonical	1	2	junction_3	27.6284877134695	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	226	False	NA	NA	False	NA	NA	NA	29735899	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29736353_29753468_29753675_29754320_29754531_29754776_29755393_29755481_29755606_29756779_29756873_29757255_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.26	chr6	+	2306	7	ISM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	19786	7	19786	-7	3prime_fragment	FALSE	canonical	3	74	junction_2	7.6955975870768	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCATGCGTGTTTCTTT	8716	False	NA	NA	False	NA	NA	NA	29755478	29761357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ES.28108.3	chr6	+	181	1	Intergenic	novelGene_23345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29626514	29626695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29626500_29626700
ES.28108.4	chr6	+	181	1	Intergenic	novelGene_23346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTATTTTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	29638150	29638331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29638200_29638300
ES.28108.5	chr6	+	518	2	Intergenic	novelGene_23347	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTGTATAATGTGTATT	NA	False	NA	9	True	AATAAA	-19	NA	29639057	29642169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29639206_29641799
ES.28108.6	chr6	+	578	2	Intergenic	novelGene_23348	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGTGTATAATGTGTAT	NA	False	NA	8	True	AATAAA	-18	NA	29639269	29642168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29639359_29641679
ES.28108.7	chr6	+	183	1	Intergenic	novelGene_23349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29648395	29648578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29648400_29648600
ES.28108.8	chr6	+	174	1	Intergenic	novelGene_23352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTCGTTAGT	NA	False	NA	NA	False	NA	NA	NA	29668425	29668599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29668400_29668600
ES.28108.9	chr6	+	175	1	Intergenic	novelGene_23354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAGAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	29688742	29688917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29688700_29688900
ES.28109.1	chr6	-	3981	24	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-1	16096	intron_retention	TRUE	non_canonical	0	0	junction_1	141.223414949706	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGTGGATCCAGTCAC	12	True	NA	NA	False	ATTAAA	-2	NA	29609613	29524729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29524737_29540829_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.10	chr6	-	4402	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	-68	-744	8	0	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	False	NA	-2	True	TTTAAA	-5	NA	29609878	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ES.28109.12	chr6	-	4218	23	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_22	211.132331892223	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	23	True	NA	-2	True	TTTAAA	-5	NA	29609818	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29599538_29599698_29609364
ES.28109.13	chr6	-	4005	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_9	144.297335645466	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	9	True	NA	-2	True	TTTAAA	-5	NA	29609616	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561444_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.15	chr6	-	5570	2	ISM	ENSMUSG00000012535.15	ENSMUST00000170647.2	1664	8	12302	-155	9273	0	3prime_fragment	FALSE	canonical	3	676	junction_1	0	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	7058	False	NA	-2	True	TTTAAA	-5	NA	29547791	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_29541866_29543261
ES.28109.16	chr6	-	5380	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	8	0	intron_retention	FALSE	canonical	3	521	junction_16	53.2242506915598	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	False	NA	-2	True	TTTAAA	-5	NA	29609878	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.17	chr6	-	3519	20	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_16	152.778640586276	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	12	True	NA	-2	True	TTTAAA	-5	NA	29609613	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.19	chr6	-	4203	25	NIC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_23	214.078451352146	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	12	True	NA	-2	True	TTTAAA	-5	NA	29609613	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29601956_29602023_29609364
ES.28109.2	chr6	-	7545	20	NIC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-3	2	intron_retention	FALSE	canonical	3	521	junction_14	52.8974861814938	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	10	True	NA	0	True	TTTAAA	-7	NA	29609615	29540823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.20	chr6	-	5180	20	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	91	junction_18	135.528983111207	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAGTGTTTTTATTTCC	12	True	NA	-3	True	TTTAAA	-4	NA	29609613	29540826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
ES.28109.22	chr6	-	4119	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-30	-2	intron_retention	TRUE	canonical	2	2	junction_13	146.467722214806	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGTGTTTTTATTTC	-7	True	NA	-4	True	TTTAAA	-3	NA	29609848	29540827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.23	chr6	-	4016	24	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	223.119471756162	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGTGTTTTTATTTC	7	True	NA	-4	True	TTTAAA	-3	NA	29609618	29540827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29560914_29560988_29561358_29561420_29562856_29562934_29565207_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.25	chr6	-	5716	1	NIC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	10520	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	782	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCAGTGTTTTTATTT	8305	False	NA	-5	True	TTTAAA	-2	NA	29546544	29540828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29540800_29546500
ES.28109.27	chr6	-	8056	21	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	13	-22	intron_retention	FALSE	canonical	0	0	junction_3	228.369979419362	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACCAATTTTTAAAAT	248	False	NA	-24	True	NA	NA	NA	29609593	29540847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29543360_29551850_29551964_29554793_29557844_29558815_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ES.28109.28	chr6	-	4190	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-3	-22	intron_retention	FALSE	canonical	0	0	junction_22	144.382991889999	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACCAATTTTTAAAAT	10	True	NA	-24	True	NA	NA	NA	29609615	29540847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609132
ES.28109.29	chr6	-	4159	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	5	-24	intron_retention	FALSE	canonical	3	521	junction_16	53.4311602802044	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAACCAATTTTTAAA	-3	True	NA	-26	True	NA	NA	NA	29609628	29540849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.3	chr6	-	4260	24	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-23	2	intron_retention	FALSE	canonical	3	7	junction_23	185.996371694595	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	0	True	NA	0	True	TTTAAA	-7	NA	29609841	29540823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29602857_29602910_29609364
ES.28109.30	chr6	-	3798	22	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	11	-29	intron_retention	FALSE	canonical	0	0	junction_20	147.732214686695	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATAAAACCAATTT	246	False	NA	-31	True	AATAAA	-45	NA	29609595	29540854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589036_29589229_29609364
ES.28109.33	chr6	-	3957	23	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-3	-29	intron_retention	FALSE	canonical	2	11	junction_5	188.447819245839	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATAAAACCAATTT	10	True	NA	-31	True	AATAAA	-45	NA	29609615	29540854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556988_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.36	chr6	-	4710	7	NIC	ENSMUSG00000012535.15	novel	1664	8	NA	NA	-2758	-39	intron_retention	FALSE	canonical	3	659	junction_4	35.7697109608426	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAAAGAAAAAAATA	NA	False	NA	-41	True	AATAAA	-35	NA	29562851	29540864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080
ES.28109.39	chr6	-	4007	24	NIC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-3	-39	intron_retention	FALSE	canonical	2	5	junction_22	186.94072734092	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAAAGAAAAAAATA	10	True	NA	-41	True	AATAAA	-35	NA	29609615	29540864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29601956_29602023_29609364
ES.28109.4	chr6	-	4297	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	-44	-2	-44	2	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	NA	False	NA	0	True	TTTAAA	-7	NA	29609930	29540823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.41	chr6	-	3900	24	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-4	-39	intron_retention	FALSE	non_canonical	0	0	junction_15	141.223414949706	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAAAGAAAAAAATA	9	True	NA	-41	True	AATAAA	-35	NA	29609616	29540864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572627_29572668_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.42	chr6	-	3937	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-3	-39	intron_retention	FALSE	canonical	0	0	junction_16	143.707929524659	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAAAGAAAAAAATA	10	True	NA	-41	True	AATAAA	-35	NA	29609615	29540864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575145_29578458_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.44	chr6	-	6152	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-1	-62	intron_retention	FALSE	canonical	3	521	junction_16	55.7753430190159	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	-64	True	AATAAA	-12	NA	29609613	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.46	chr6	-	3892	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-1	-62	intron_retention	FALSE	canonical	2	10	junction_6	141.921757049323	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	-64	True	AATAAA	-12	NA	29609613	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557048_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.47	chr6	-	3908	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-10	-62	intron_retention	FALSE	canonical	1	1	junction_10	144.147250241085	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	198	False	NA	-64	True	AATAAA	-12	NA	29609643	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565207_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.48	chr6	-	3909	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-3	-62	intron_retention	FALSE	non_canonical	0	0	junction_17	142.987198178631	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10	True	NA	-64	True	AATAAA	-12	NA	29609615	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579528_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.5	chr6	-	4254	23	FSM	ENSMUSG00000012535.15	ENSMUST00000115251.8	3989	23	-263	-2	17	2	multi-exon	FALSE	canonical	3	17	junction_4	140.778774050425	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	-28	True	NA	0	True	TTTAAA	-7	NA	29609869	29540823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.51	chr6	-	4111	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-2	-62	intron_retention	FALSE	canonical	2	11	junction_5	141.934982496206	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21	True	NA	-64	True	AATAAA	-12	NA	29609820	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556988_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.52	chr6	-	4198	24	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-23	-62	intron_retention	FALSE	canonical	0	0	junction_3	183.983099001882	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	-64	True	AATAAA	-12	NA	29609841	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29545575_29545630_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.54	chr6	-	4406	26	NNC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	-8	-62	intron_retention	FALSE	canonical	1	1	junction_23	237.042524455002	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	15	True	NA	-64	True	AATAAA	-12	NA	29609826	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29601956_29602023_29602857_29602910_29609364
ES.28109.56	chr6	-	4068	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	3	-62	intron_retention	FALSE	canonical	2	4	junction_20	143.590527784466	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26	True	NA	-64	True	AATAAA	-12	NA	29609815	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29588021_29588096_29589027_29589229_29609364
ES.28109.57	chr6	-	4135	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-30	-62	intron_retention	FALSE	non_canonical	0	0	junction_8	192.346901660808	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	-64	True	AATAAA	-12	NA	29609848	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561370_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578593_29579515_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.58	chr6	-	5131	21	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	3	-62	intron_retention	FALSE	canonical	3	91	junction_19	132.620548935676	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26	True	NA	-64	True	AATAAA	-12	NA	29609815	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
ES.28109.59	chr6	-	6374	22	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-19	-62	intron_retention	FALSE	canonical	0	0	junction_10	147.626989033701	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	-64	True	AATAAA	-12	NA	29609837	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29565256_29565658_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.6	chr6	-	4128	22	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	1	2	intron_retention	FALSE	canonical	3	91	junction_20	129.939965206333	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTTTATTTCCCTT	NA	False	NA	0	True	TTTAAA	-7	NA	29609885	29540823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
ES.28109.60	chr6	-	3241	20	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	183	-62	intron_retention	FALSE	canonical	0	0	junction_5	206.337753932868	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-64	True	AATAAA	-12	NA	29582202	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29555750_29555863_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164
ES.28109.61	chr6	-	7291	21	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-3	-62	intron_retention	FALSE	canonical	3	521	junction_15	54.4595951141762	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10	True	NA	-64	True	AATAAA	-12	NA	29609615	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.62	chr6	-	4530	23	NIC	ENSMUSG00000012535.15	novel	3590	24	NA	NA	8	-62	intron_retention	FALSE	canonical	3	27	junction_22	184.191829800589	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-64	True	AATAAA	-12	NA	29609878	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ES.28109.65	chr6	-	3924	21	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-8	-62	intron_retention	FALSE	canonical	0	0	junction_2	195.120578104925	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	15	True	NA	-64	True	AATAAA	-12	NA	29609826	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.66	chr6	-	4067	22	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-1	-62	intron_retention	FALSE	canonical	0	0	junction_4	231.18850962824	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	-64	True	AATAAA	-12	NA	29609613	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29555750_29555863_29556988_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.67	chr6	-	3910	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-4	-62	intron_retention	FALSE	non_canonical	0	0	junction_10	144.340112864783	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9	True	NA	-64	True	AATAAA	-12	NA	29609616	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562922_29565166_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.68	chr6	-	5472	21	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-24	-62	intron_retention	FALSE	canonical	3	521	junction_15	51.6985493026642	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-1	True	NA	-64	True	AATAAA	-12	NA	29609842	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.70	chr6	-	6406	12	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	785	-62	intron_retention	FALSE	canonical	3	566	junction_8	56.2154944671113	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	-64	True	AATAAA	-12	NA	29570733	29540887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29565262_29565662_29565855_29568852
ES.28109.72	chr6	-	3705	22	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-4	-63	intron_retention	FALSE	canonical	0	0	junction_7	247.82856520673	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9	True	NA	-65	True	AATAAA	-11	NA	29609616	29540888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29602857_29602910_29609364
ES.28109.74	chr6	-	3809	22	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-1	-63	intron_retention	FALSE	canonical	3	17	junction_4	182.384620129725	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	12	True	NA	-65	True	AATAAA	-11	NA	29609613	29540888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
ES.28109.76	chr6	-	3827	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-4	-63	intron_retention	FALSE	non_canonical	0	0	junction_19	144.283095233807	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9	True	NA	-65	True	AATAAA	-11	NA	29609616	29540888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582218_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.77	chr6	-	3984	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	-9	-64	intron_retention	FALSE	canonical	1	1	junction_18	147.190021721349	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	14	True	NA	-66	True	AATAAA	-10	NA	29609827	29540889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.78	chr6	-	3825	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	273	153	-1	2	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	12	True	NA	NA	False	NA	NA	NA	29609613	29540978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.79	chr6	-	3931	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	66	254	-2	-99	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGTGAATTATTCATC	21	True	NA	NA	False	ATTAAA	-16	NA	29609820	29541079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.80	chr6	-	4094	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	-15	-489	-7	-100	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAGTGAATTATTCAT	16	True	NA	NA	False	ATTAAA	-15	NA	29609825	29541080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ES.28109.81	chr6	-	3746	23	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	0	-102	intron_retention	FALSE	canonical	0	0	junction_8	144.028011795686	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTTAGTGAATTATTC	3	True	NA	NA	False	ATTAAA	-13	NA	29609622	29541082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561342_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ES.28109.82	chr6	-	213	1	Intergenic	novelGene_23341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	29577513	29577300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29577300_29577500
ES.28109.9	chr6	-	2690	20	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	-3805	0	intron_retention	FALSE	non_canonical	0	0	junction_1	154.938214832599	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	False	NA	-2	True	TTTAAA	-5	NA	29586190	29540825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_29540854_29541804_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036
ES.2811.1	chr10	-	175	1	Intergenic	novelGene_2140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAACATTAC	NA	False	NA	NA	False	NA	NA	NA	58210559	58210384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58210400_58210600
ES.28110.1	chr6	-	322	1	Intergenic	novelGene_23350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	8371	False	NA	NA	False	NA	NA	NA	29661544	29661222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29661200_29661500
ES.28110.2	chr6	-	179	1	Intergenic	novelGene_23351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAC	8369	False	NA	NA	False	NA	NA	NA	29661546	29661367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29661400_29661500
ES.28111.1	chr6	-	269	1	Intergenic	novelGene_23353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29685296	29685027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29685000_29685300
ES.28112.1	chr6	-	221	1	Intergenic	novelGene_23357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTTGTATACTACACA	NA	False	NA	NA	False	NA	NA	NA	29741480	29741259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29741300_29741500
ES.28113.1	chr6	+	5673	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	-512	-6	-43	0	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	7049	False	NA	9	True	AATAAA	-17	NA	29767966	29912309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.11	chr6	+	2223	3	NNC	ENSMUSG00000029772.18	novel	986	5	NA	NA	2	31944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTGTTTTGATTTTT	-27	True	NA	NA	False	NA	NA	NA	29768480	29802586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29799437_29799584_29800934
ES.28113.12	chr6	+	4233	17	NNC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	32.461936845327	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCCTTGGCCCAGAGTG	-27	True	NA	NA	False	ATTAAA	-18	NA	29768480	29909210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29885668_29885882_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.14	chr6	+	5805	21	NNC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.8749468084839	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-15	True	NA	8	True	AATAAA	-16	NA	29768492	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29799437_29799584_29800934_29801045_29820327_29820634_29822245_29822343_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.16	chr6	+	590	3	ISM	ENSMUSG00000029772.18	ENSMUST00000150365.8	986	5	-33	50253	3	-42876	5prime_fragment	FALSE	canonical	3	8	junction_2	1.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATATTATAA	-14	True	NA	NA	False	NA	NA	NA	29768493	29820359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29768906_29799437_29799584_29820327
ES.28113.17	chr6	+	4790	14	NIC	ENSMUSG00000029772.18	novel	5152	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.6845462919625	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-13	True	NA	8	True	AATAAA	-16	NA	29768494	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29768906_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.18	chr6	+	5273	18	NNC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	40.874438506032	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTGTCCTGAGAATAC	-11	True	NA	7	True	AATAAA	-15	NA	29768496	29912307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29902926_29903059_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.19	chr6	+	6036	15	NIC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	-8	-557	intron_retention	FALSE	canonical	0	0	junction_1	33.1656325685712	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGTGCTACTTCAAG	11	True	NA	NA	False	AATACA	-15	NA	29768518	29911746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29768906_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29908467_29909038
ES.28113.2	chr6	+	5455	18	NNC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	30.0608379663434	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	7053	False	NA	8	True	AATAAA	-16	NA	29767970	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768336_29768548_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.20	chr6	+	5023	18	NNC	ENSMUSG00000029772.18	novel	5152	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	31.7117205145523	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	12	True	NA	9	True	AATAAA	-17	NA	29768519	29912309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038_29911487_29911583
ES.28113.21	chr6	+	2970	1	Intergenic	novelGene_23359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTTGGTTCTGGTTGT	5458	False	NA	NA	False	AATAAA	-18	NA	29778466	29781436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29778500_29781400
ES.28113.22	chr6	+	170	1	Intergenic	novelGene_23361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	29788300	29788470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29788300_29788500
ES.28113.23	chr6	+	135	1	Intergenic	novelGene_23362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	29790236	29790371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29790200_29790400
ES.28113.24	chr6	+	187	1	Intergenic	novelGene_23363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAATAGCAA	NA	False	NA	NA	False	NA	NA	NA	29816212	29816399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29816200_29816400
ES.28113.25	chr6	+	5001	18	NIC	ENSMUSG00000029772.18	novel	2019	17	NA	NA	-26	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	41.0018144589643	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATCTGTGTCCTGA	NA	False	NA	1	True	AATAAA	-9	NA	29853732	29912301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29853884_29854014_29854139_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.26	chr6	+	4965	18	NNC	ENSMUSG00000029772.18	novel	2019	17	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.1538593379564	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTGTCCTGAGAATAC	NA	False	NA	7	True	AATAAA	-15	NA	29853732	29912307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29853884_29854056_29854139_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.27	chr6	+	5098	17	FSM	ENSMUSG00000029772.18	ENSMUST00000064872.13	2019	17	15	-3094	1	0	multi-exon	FALSE	canonical	0	0	junction_1	32.3143132953495	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	5	True	NA	8	True	AATAAA	-16	NA	29853773	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29854139_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.29	chr6	+	4625	15	FSM	ENSMUSG00000029772.18	ENSMUST00000149816.8	4903	15	278	0	278	0	multi-exon	FALSE	canonical	3	103	junction_6	11.049286614704	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-15	True	NA	8	True	AATAAA	-16	NA	29870565	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.3	chr6	+	5151	18	NIC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	-193	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.7117205145523	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATCTGTGTCCTGA	7331	False	NA	1	True	AATAAA	-9	NA	29768248	29912301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29768317_29768548_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.30	chr6	+	3733	6	ISM	ENSMUSG00000029772.18	ENSMUST00000149816.8	4903	15	26031	2	-9	-2	3prime_fragment	FALSE	canonical	3	107	junction_5	10.6320270880016	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTGTCCTGAGAATA	1525	False	NA	6	True	AATAAA	-14	NA	29896318	29912306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.31	chr6	+	3266	1	NIC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	5531	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATCTGTGTCCTGA	NA	False	NA	1	True	AATAAA	-9	NA	29909035	29912301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29909000_29912300
ES.28113.5	chr6	+	2076	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	-12	3091	-12	-1	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTGGCCCAGAGTGTG	184	False	NA	NA	False	ATTAAA	-20	NA	29768466	29909212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28113.6	chr6	+	5266	16	NIC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	86	junction_2	15.7880404807633	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTGTCCTGAGAATA	-33	True	NA	6	True	AATAAA	-14	NA	29768474	29912306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906759_29908345_29908467_29909038
ES.28113.7	chr6	+	5116	17	NNC	ENSMUSG00000029772.18	novel	5152	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	39.4124326038117	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-33	True	NA	8	True	AATAAA	-16	NA	29768474	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29768906_29863138_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908396_29908467_29909038
ES.28113.8	chr6	+	1719	3	ISM	ENSMUSG00000029772.18	ENSMUST00000150365.8	986	5	-51	49142	-3	-41765	5prime_fragment	FALSE	canonical	3	8	junction_2	1.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTGTGAGTCACCTG	-32	True	NA	NA	False	AATAAA	-28	NA	29768475	29821470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_29768906_29799437_29799584_29820327
ES.28113.9	chr6	+	5305	18	NIC	ENSMUSG00000029772.18	novel	5155	17	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	39.5262603785834	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	-28	True	NA	8	True	AATAAA	-16	NA	29768479	29912308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29768906_29799437_29799584_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ES.28114.1	chr6	-	181	1	Intergenic	novelGene_23358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGTATACATAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29777093	29776912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29776900_29777100
ES.28115.1	chr6	-	159	1	Intergenic	novelGene_23360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATAGAGCTAGCAGA	NA	False	NA	NA	False	NA	NA	NA	29780753	29780594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29780600_29780800
ES.28116.1	chr6	-	205	1	Intergenic	novelGene_23364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTAAATACAAGGATAT	NA	False	NA	NA	False	NA	NA	NA	29823295	29823090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_29823100_29823300
ES.28117.1	chr6	-	3813	13	Antisense	novelGene_ENSMUSG00000029772.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCACAACATAATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	29909891	29876676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_29878630_29880546_29880642_29883620_29883727_29886114_29886233_29890678_29890742_29891197_29891286_29894814_29894887_29896318_29896415_29903186_29903285_29906504_29906574_29906677_29906758_29908344_29908461_29909032
ES.28118.1	chr6	+	5418	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	-48	0	-47	0	multi-exon	FALSE	canonical	3	5	junction_19	5.0386009963084	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTAGTTCTTTAA	2258	False	NA	NA	False	AATAAA	-24	NA	29916963	29959680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
ES.28118.2	chr6	+	5229	22	NNC	ENSMUSG00000039629.15	novel	5370	21	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	5.83483945571109	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTTAAGAAATCTGGTC	-6	True	NA	NA	False	AATAAA	-11	NA	29917010	29959667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656_29959148_29959276
ES.28118.3	chr6	+	8047	19	NNC	ENSMUSG00000039629.15	novel	5370	21	NA	NA	2	0	intron_retention	TRUE	non_canonical	0	0	junction_6	6.53409859463755	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTAGTTCTTTAA	-3	True	NA	NA	False	AATAAA	-24	NA	29917013	29959680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29956157_29956369
ES.28118.4	chr6	+	3099	18	FSM	ENSMUSG00000039629.15	ENSMUST00000137068.6	3098	18	2	-3	2	3	multi-exon	FALSE	canonical	3	10	junction_1	4.07116622894077	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTGTTTTCTTTT	-3	True	NA	NA	False	TATAAA	-12	NA	29917013	29945556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424
ES.28118.5	chr6	+	5366	21	NNC	ENSMUSG00000039629.15	novel	5370	21	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.90656414508469	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAATCTGGTCTTTAG	6	True	NA	NA	False	AATAAA	-16	NA	29917022	29959672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29917245_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
ES.28118.6	chr6	+	4588	18	FSM	ENSMUSG00000039629.15	ENSMUST00000137068.6	3098	18	33	-1523	33	1	multi-exon	FALSE	canonical	3	10	junction_1	4.07116622894077	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAACGTTGTTTATATT	28	False	NA	NA	False	NA	NA	NA	29917044	29947076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424
ES.28118.7	chr6	+	6233	19	NIC	ENSMUSG00000039629.15	novel	5370	21	NA	NA	37	-3	intron_retention	FALSE	canonical	1	1	junction_16	5.73622881235175	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAAATCTGGTCTTTA	32	False	NA	NA	False	AATAAA	-15	NA	29917048	29959671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_29917230_29920460_29920531_29923913_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29953347_29953453_29955430_29955636_29956656
ES.28118.8	chr6	+	7291	14	NNC	ENSMUSG00000039629.15	novel	5370	21	NA	NA	7983	0	intron_retention	FALSE	canonical	0	0	junction_1	7.40621840117594	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTAGTTCTTTAA	7978	False	NA	NA	False	AATAAA	-24	NA	29924994	29959680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_29927919_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29956656
ES.28118.9	chr6	+	176	1	Intergenic	novelGene_23365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	29956168	29956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29956200_29956300
ES.28119.1	chr6	+	169	1	Intergenic	novelGene_23366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAAAAGAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	29982618	29982787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29982600_29982800
ES.2812.1	chr10	-	6269	1	Intergenic	novelGene_2141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9881	False	NA	NA	False	NA	NA	NA	58222871	58216602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58216600_58222900
ES.28120.1	chr6	+	175	1	Intergenic	novelGene_23367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATAGAAAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	29982802	29982977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29982800_29983000
ES.28121.1	chr6	+	179	1	Intergenic	novelGene_23368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATATTAAAGAAAA	4828	False	NA	NA	False	NA	NA	NA	29990189	29990368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29990200_29990400
ES.28122.1	chr6	-	2852	2	Antisense	novelGene_ENSMUSG00000045709.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACAGTGGCTCTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	29998725	29993339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_29995780_29998313
ES.28123.1	chr6	+	157	1	Intergenic	novelGene_23369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29999381	29999538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_29999400_29999500
ES.28124.1	chr6	-	171	1	Intergenic	novelGene_23370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	30028276	30028105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30028100_30028300
ES.28125.1	chr6	+	2414	14	NNC	ENSMUSG00000058440.15	novel	1625	11	NA	NA	-19249	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	202.961476509079	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	1539	False	NA	NA	False	AATAAA	-43	NA	30028737	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30028801_30032653_30032780_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.10	chr6	+	2376	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTAGTTGTCTCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	30047975	30140901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.11	chr6	+	2330	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGTTGTCTCTGTGTAA	-31	True	NA	NA	False	NA	NA	NA	30047983	30140902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.12	chr6	+	1920	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	-46	5	-3	0	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	-31	True	NA	2	True	AATAAA	-18	NA	30047983	30144854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ES.28125.13	chr6	+	3595	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	-17	-283	-3	5	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	-31	True	NA	NA	False	AATAAA	-23	NA	30047983	30153462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.15	chr6	+	1830	12	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	2978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	148.161013598089	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAATCCATTTTGGGG	-31	True	NA	NA	False	AATAAA	-8	NA	30047983	30133093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30132908
ES.28125.16	chr6	+	3350	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTCTTTTCTGT	-31	True	NA	71	True	TATAAA	-14	NA	30047983	30153181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.19	chr6	+	2326	13	NNC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	181.590350942872	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-28	True	NA	NA	False	AATAAA	-43	NA	30047986	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090121_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.2	chr6	+	3270	13	NNC	ENSMUSG00000058440.15	novel	1625	11	NA	NA	-19235	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.652545410493	918	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTCTTTTCTGT	1553	False	NA	71	True	TATAAA	-14	NA	30028751	30153181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30028801_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.20	chr6	+	3622	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	180.170347634306	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	-25	True	NA	NA	False	AATAAA	-23	NA	30047989	30153462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.21	chr6	+	2445	14	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	185.231503959698	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-25	True	NA	NA	False	AATAAA	-15	NA	30047989	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30090566_30090692_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.23	chr6	+	3307	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	-10	-2	1	2	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTATGTTCTTTTCTGT	-24	True	NA	71	True	TATAAA	-14	NA	30047990	30153181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.26	chr6	+	3082	11	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	2	-60	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	178.554445478123	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTGAGAAAAGTTTCC	-23	True	NA	9	True	ATTAAA	-21	NA	30047991	30153119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.28	chr6	+	2616	13	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	191.595693381198	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTTTGAGAAAAGTTT	-17	True	NA	7	True	ATTAAA	-19	NA	30047997	30153117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30152168
ES.28125.29	chr6	+	2458	14	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-1	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	200.52062415138	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	-15	True	NA	NA	False	AATAAA	-43	NA	30047999	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30123825_30123946_30126233_30126359_30140214
ES.28125.3	chr6	+	179	1	Intergenic	novelGene_23371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAGTTTTAAA	6096	False	NA	NA	False	NA	NA	NA	30033294	30033473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30033300_30033500
ES.28125.30	chr6	+	3102	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	5	-62	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	205.998435362749	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTTTGAGAAAAGTTT	-9	True	NA	7	True	ATTAAA	-19	NA	30048005	30153117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.34	chr6	+	2399	14	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-13	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.194109545149	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	AATAAA	-15	NA	30048014	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30051872_30051977_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.35	chr6	+	1926	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGGTTTGGGCTTTGG	1	True	NA	7	True	AATAAA	-23	NA	30048015	30144859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ES.28125.36	chr6	+	2405	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-1	-44	intron_retention	FALSE	canonical	0	0	junction_3	152.442212327077	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12	True	NA	NA	False	AATAAA	-15	NA	30048026	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089910_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.39	chr6	+	1899	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	-1	-31	combination_of_known_splicesites	FALSE	canonical	2	22	junction_12	146.904991027837	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAATAAAAATTAG	12	True	NA	-29	True	NA	NA	NA	30048026	30144823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214_30140271_30144579
ES.28125.4	chr6	+	166	1	Intergenic	novelGene_23372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30037849	30038015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30037800_30038000
ES.28125.40	chr6	+	2536	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115200.8	2491	12	-44	-1	-1	1	multi-exon	FALSE	canonical	2	18	junction_11	150.023028535319	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTGCACAGCTTTATT	12	True	NA	NA	False	AATAAA	-23	NA	30048026	30130116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30129179
ES.28125.42	chr6	+	2233	12	NNC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	1	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.951695469478	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	16	True	NA	NA	False	AATAAA	-15	NA	30048030	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048104_30088829_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.43	chr6	+	2115	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	49	1420	-5	361	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATGTATGAAACCTGCA	21	True	NA	NA	False	NA	NA	NA	30048035	30152037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.44	chr6	+	1623	11	ISM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	6	18471	-5	-3003	5prime_fragment	FALSE	canonical	3	287	junction_2	80.5655633630151	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTGTTTCCACTTAAA	21	True	NA	NA	False	NA	NA	NA	30048035	30126388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233
ES.28125.45	chr6	+	3273	13	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.369608665777	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATGTTCTTTTCTGTA	22	True	NA	72	True	TATAAA	-15	NA	30048036	30153182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090121_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.46	chr6	+	3686	13	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	189.414375261107	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	22	True	NA	NA	False	AATAAA	-23	NA	30048036	30153462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30105949_30106094_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.47	chr6	+	3028	13	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	163.15449392796	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	23	True	NA	NA	False	AATAAA	-23	NA	30048037	30153462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30151656_30152168
ES.28125.48	chr6	+	2307	12	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	-1	-16	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	148.993482579741	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	25	True	NA	NA	False	AATAAA	-43	NA	30048039	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119151_30126233_30126359_30140214
ES.28125.5	chr6	+	184	1	Intergenic	novelGene_23373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACAACTT	NA	False	NA	NA	False	NA	NA	NA	30038285	30038469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30038300_30038500
ES.28125.50	chr6	+	3273	13	NNC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	1	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	196.654148612905	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTTTGAGAAAAGTTT	27	True	NA	7	True	ATTAAA	-19	NA	30048041	30153117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119151_30126233_30126359_30151512
ES.28125.51	chr6	+	1868	13	NNC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	-2	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	194.367921450246	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	AATAAA	-14	NA	30048068	30140858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140583
ES.28125.52	chr6	+	2412	12	NIC	ENSMUSG00000058440.15	novel	1625	11	NA	NA	113	-44	intron_retention	FALSE	canonical	0	0	junction_1	187.98492114665	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	192	False	NA	NA	False	AATAAA	-15	NA	30048262	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30048356_30088831_30088988_30089910_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.53	chr6	+	175	1	Intergenic	novelGene_23379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGACATTGAACTT	3441	False	NA	NA	False	NA	NA	NA	30068961	30069136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30069000_30069100
ES.28125.54	chr6	+	1935	1	Intergenic	novelGene_23380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTGCAGTGCTGGTTG	5783	False	NA	NA	False	NA	NA	NA	30071303	30073238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30071300_30073200
ES.28125.55	chr6	+	5736	2	NNC	ENSMUSG00000058440.15	novel	2296	13	NA	NA	-4817	-12739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATATAGGCCAGCTGTA	5982	False	NA	NA	False	AAGAAA	-19	NA	30071502	30077298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30075789_30075848
ES.28125.56	chr6	+	2035	11	ISM	ENSMUSG00000058440.15	ENSMUST00000115200.8	2491	12	40819	356	-998	0	3prime_fragment	FALSE	canonical	2	18	junction_10	156.397442434331	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTAATGCTTGGTA	8946	False	NA	NA	False	ATTAAA	-17	NA	30088889	30129759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30129179
ES.28125.57	chr6	+	3802	9	ISM	ENSMUSG00000058440.15	ENSMUST00000167972.9	1541	10	4438	-1506	-3450	3	3prime_fragment	FALSE	canonical	3	109	junction_8	133.611786063206	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATGTTCTTTTCTGTA	NA	False	NA	72	True	TATAAA	-15	NA	30094331	30153182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ES.28125.58	chr6	+	1735	7	ISM	ENSMUSG00000058440.15	ENSMUST00000115208.8	2492	12	53945	11635	4207	-16	internal_fragment	FALSE	canonical	3	271	junction_6	101.732355827545	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	NA	False	NA	NA	False	AATAAA	-43	NA	30101988	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.59	chr6	+	1819	7	ISM	ENSMUSG00000058440.15	ENSMUST00000004761.13	1589	10	12273	-723	4385	-1	3prime_fragment	FALSE	canonical	2	18	junction_6	185.714536019367	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTGCACAGCTTTA	10	False	NA	NA	False	AATAAA	-21	NA	30102166	30130114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30129179
ES.28125.6	chr6	+	180	1	Intergenic	novelGene_23374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACCCA	NA	False	NA	NA	False	NA	NA	NA	30038744	30038924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30038700_30038900
ES.28125.60	chr6	+	1229	5	FSM	ENSMUSG00000058440.15	ENSMUST00000132866.2	1253	5	-20	44	-20	-44	multi-exon	FALSE	canonical	3	271	junction_4	120.692791831161	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	30116093	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ES.28125.61	chr6	+	4941	2	ISM	ENSMUSG00000058440.15	ENSMUST00000132866.2	1253	5	5949	44	5949	-44	3prime_fragment	FALSE	canonical	3	271	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	30122062	30140859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30126359_30140214
ES.28125.62	chr6	+	2029	1	NIC	ENSMUSG00000058440.15	novel	2491	12	NA	NA	11972	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTGCACAGCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	30128085	30130114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30128100_30130100
ES.28125.63	chr6	+	2477	1	NIC	ENSMUSG00000058440.15	novel	2492	12	NA	NA	22297	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTTTACTGAGGTA	NA	False	NA	NA	False	AATAAA	-43	NA	30138410	30140887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30138400_30140900
ES.28125.64	chr6	+	2919	1	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	25816	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGCATATGTATGGT	NA	False	NA	-4	True	AATAAA	-12	NA	30141929	30144848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30141900_30144800
ES.28125.7	chr6	+	174	2	Intergenic	novelGene_23375	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30038748	30042261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30038873_30042211
ES.28125.8	chr6	+	190	1	Intergenic	novelGene_23376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGTACAGAACTAATA	NA	False	NA	NA	False	NA	NA	NA	30045008	30045198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30045000_30045200
ES.28126.1	chr6	+	1526	1	Intergenic	novelGene_23383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30154841	30156367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30154800_30156400
ES.28127.1	chr6	+	132	1	Intergenic	novelGene_23385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	30159188	30159320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30159200_30159300
ES.28128.1	chr6	+	175	1	Intergenic	novelGene_23386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	30164863	30165038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30164900_30165000
ES.28129.1	chr6	+	2848	2	Genic_Genomic	ENSMUSG00000103108.3	novel	2234	1	NA	NA	1439	2911	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAACAAAACTGTTT	1465	False	NA	NA	False	ATTAAA	-18	NA	30174330	30178036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_30174472_30175329
ES.2813.1	chr10	-	179	1	Intergenic	novelGene_2142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCACTTTGT	NA	False	NA	NA	False	NA	NA	NA	58233420	58233241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58233200_58233400
ES.28130.1	chr6	-	168	1	Intergenic	novelGene_23377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACCTATT	NA	False	NA	NA	False	NA	NA	NA	30056047	30055879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30055900_30056000
ES.28131.1	chr6	-	175	1	Intergenic	novelGene_23378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTGGTGCCACAG	NA	False	NA	NA	False	NA	NA	NA	30058688	30058513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30058500_30058700
ES.28132.1	chr6	-	114	1	Intergenic	novelGene_23381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAGAAAAAAAATAA	NA	False	NA	NA	False	AGTAAA	-25	NA	30105250	30105136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30105100_30105200
ES.28133.1	chr6	-	5788	1	Antisense	novelGene_ENSMUSG00000058440.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAACCAAA	245	False	NA	NA	False	NA	NA	NA	30135710	30129922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_30129900_30135700
ES.28134.1	chr6	-	177	2	Antisense	novelGene_ENSMUSG00000103108.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	30188088	30145869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_30145989_30188030
ES.28134.2	chr6	-	156	1	Intergenic	novelGene_23382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAAATATTTA	1057	False	NA	NA	False	NA	NA	NA	30146044	30145888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30145900_30146000
ES.28134.3	chr6	-	1222	1	Intergenic	novelGene_23384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGTGATGGTGAATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30159847	30158625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30158600_30159800
ES.28134.4	chr6	-	964	2	Antisense	novelGene_ENSMUSG00000103108.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCCTTGTCTTCTTGA	-2	True	NA	NA	False	AAGAAA	-16	NA	30174106	30169930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_30170467_30173678
ES.28134.5	chr6	-	2609	1	Intergenic	novelGene_23387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-42	NA	30182027	30179418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30179400_30182000
ES.28135.1	chr6	+	1815	2	Intergenic	novelGene_23388	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	30200006	30210277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30200197_30208652
ES.28135.2	chr6	+	196	1	Intergenic	novelGene_23389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCGGGCAGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	30203677	30203873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30203700_30203900
ES.28136.1	chr6	+	175	1	Intergenic	novelGene_23391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTATTTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	30223422	30223597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30223400_30223600
ES.28137.1	chr6	+	2448	1	Intergenic	novelGene_23395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTGCAGTACAGCTCA	NA	False	NA	NA	False	TTTAAA	-34	NA	30244956	30247404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30245000_30247400
ES.28138.1	chr6	+	2048	1	Intergenic	novelGene_23396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	30288354	30290402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30288400_30290400
ES.28138.2	chr6	+	5001	1	Intergenic	novelGene_23397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTTAAAACCAGGTTGC	NA	False	NA	NA	False	NA	NA	NA	30288354	30293355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30288400_30293400
ES.28138.3	chr6	+	3563	2	Antisense	novelGene_ENSMUSG00000039159.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCCTTAAAACCAGGTT	NA	False	NA	NA	False	NA	NA	NA	30288354	30293353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30288862_30290297
ES.28139.1	chr6	-	151	2	Intergenic	novelGene_23390	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAAGTTCATGA	9035	False	NA	NA	False	NA	NA	NA	30234720	30206805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30206847_30234610
ES.28139.10	chr6	-	3050	8	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	2	-1676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	153.569900324622	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	5	True	NA	-1	True	AATAAA	-17	NA	30304536	30212963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30222058_30222130_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.11	chr6	-	3020	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-39	1676	-39	-1676	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	NA	False	NA	-1	True	AATAAA	-17	NA	30304577	30212963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.13	chr6	-	2630	6	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28679	-1678	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	129.181422813035	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTTTGATATTGATG	NA	False	NA	-3	True	AATAAA	-15	NA	30272481	30212965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30272265
ES.28139.14	chr6	-	2894	5	FSM	ENSMUSG00000039159.17	ENSMUST00000094543.3	975	5	-25	-1894	-8	-1678	multi-exon	FALSE	canonical	3	17	junction_2	148.302688782099	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTTTGATATTGATG	-5	True	NA	-3	True	AATAAA	-15	NA	30304546	30212965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30260927_30261003_30262145_30262223_30304050
ES.28139.16	chr6	-	2628	7	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28644	-1722	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	127.467207111825	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTCTGATTACCTCCC	NA	False	NA	-47	True	AATAAA	-33	NA	30272446	30213009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30272265
ES.28139.17	chr6	-	1330	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-17	3344	-17	176	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGGAAAAGTTTGCTT	-14	True	NA	NA	False	NA	NA	NA	30304555	30214631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.18	chr6	-	1168	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-22	3511	-22	9	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTCTTGGTCATTTCT	-19	True	NA	NA	False	NA	NA	NA	30304560	30214798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.19	chr6	-	4298	3	Intergenic	novelGene_23392	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAATGAAGCATTTCAT	8964	False	NA	NA	False	NA	NA	NA	30234791	30230137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30233437_30233670_30234611_30234732
ES.28139.2	chr6	-	4695	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	-38	0	-38	0	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACTTGATCTATCA	NA	False	NA	-2	True	AATAAA	-22	NA	30304576	30211287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.20	chr6	-	207	1	Intergenic	novelGene_23393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30233665	30233458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30233500_30233700
ES.28139.21	chr6	-	1136	1	Intergenic	novelGene_23394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATCCGCTCTTGACTTG	9665	False	NA	NA	False	NA	NA	NA	30235747	30234611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30234600_30235700
ES.28139.22	chr6	-	545	4	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	118	31266	101	-20879	5prime_fragment	FALSE	canonical	3	323	junction_1	18.8561808316413	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACATTGATGAAGCGTA	121	False	NA	NA	False	AATAAA	-10	NA	30304420	30242553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.23	chr6	-	541	2	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	88	-46366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTATTTCCTCCTAAA	108	False	NA	NA	False	AATAAA	-12	NA	30304433	30268040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30268199_30304050
ES.28139.3	chr6	-	4573	5	FSM	ENSMUSG00000039159.17	ENSMUST00000094543.3	975	5	-26	-3572	-9	0	multi-exon	FALSE	canonical	3	17	junction_2	148.302688782099	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACTTGATCTATCA	-6	True	NA	-2	True	AATAAA	-22	NA	30304547	30211287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30215083_30221666_30221796_30260927_30261003_30262145_30262223_30304050
ES.28139.5	chr6	-	4307	6	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28683	-5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	129.181422813035	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGGCTGAACTTGATC	NA	False	NA	-7	True	AATAAA	-17	NA	30272485	30211292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30272265
ES.28139.6	chr6	-	4557	6	NIC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	25	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	140.862202169354	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGGCTGAACTTGATC	45	False	NA	-7	True	AATAAA	-17	NA	30304496	30211292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30215083_30221666_30221796_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.7	chr6	-	4632	7	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.810826089518	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATGGCTGAACTTGAT	11	True	NA	-8	True	AATAAA	-16	NA	30304530	30211293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215072_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ES.28139.8	chr6	-	4170	6	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	22330	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	132.82409419981	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATGGCTGAACTTGAT	NA	False	NA	-8	True	AATAAA	-16	NA	30282191	30211293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30282107
ES.28139.9	chr6	-	4344	7	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28646	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	127.467207111825	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAAATGGCTGAACTTG	NA	False	NA	-10	True	AATAAA	-14	NA	30272448	30211295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30272265
ES.2814.1	chr10	-	4667	1	Intergenic	novelGene_2143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCTTCCTACTACTAA	NA	False	NA	NA	False	AAAAAG	-42	NA	58240973	58236306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58236300_58241000
ES.28140.1	chr6	+	165	1	Intergenic	novelGene_23398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAGAAGAATGAA	NA	False	NA	NA	False	NA	NA	NA	30324457	30324622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30324500_30324600
ES.28141.1	chr6	+	166	1	Intergenic	novelGene_23399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTAATGTGGTTCCTCCT	NA	False	NA	NA	False	NA	NA	NA	30330590	30330756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30330600_30330800
ES.28142.1	chr6	+	179	1	Intergenic	novelGene_23400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30333795	30333974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30333800_30334000
ES.28143.1	chr6	-	172	1	Intergenic	novelGene_23401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATGACCCAC	NA	False	NA	NA	False	NA	NA	NA	30344061	30343889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30343900_30344100
ES.28144.1	chr6	+	155	1	Intergenic	novelGene_23402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATGAATATT	NA	False	NA	NA	False	NA	NA	NA	30349279	30349434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30349300_30349400
ES.28144.2	chr6	+	316	1	Intergenic	novelGene_23403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCTTATA	NA	False	NA	NA	False	NA	NA	NA	30349281	30349597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30349300_30349600
ES.28145.1	chr6	-	137	1	Intergenic	novelGene_23404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30364780	30364643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30364600_30364800
ES.28146.1	chr6	-	1834	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	-3	-7	2	7	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATTGTTTTCTCCCTC	-12	True	NA	0	True	AATAAA	-25	NA	30391025	30366371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.13	chr6	-	1847	11	FSM	ENSMUSG00000039130.19	ENSMUST00000102992.10	1865	11	18	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	406.359065359689	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	4	True	NA	-15	True	AATAAA	-10	NA	30391009	30366386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30366745_30369931_30369976_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.14	chr6	-	5648	7	NIC	ENSMUSG00000039130.19	novel	1865	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	382	junction_5	270.464877571932	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	-2	True	NA	-15	True	AATAAA	-10	NA	30391015	30366386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30366745_30370263_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.16	chr6	-	3756	8	NIC	ENSMUSG00000039130.19	novel	1865	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	382	junction_6	243.667136621637	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	4	True	NA	-15	True	AATAAA	-10	NA	30391009	30366386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30374919_30375937_30376066_30381779_30382687_30387419_30387532_30390855
ES.28146.17	chr6	-	5094	1	FSM	ENSMUSG00000039130.19	ENSMUST00000202393.2	831	1	-4263	0	1499	0	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	NA	False	NA	-15	True	AATAAA	-10	NA	30371480	30366386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30366400_30371500
ES.28146.20	chr6	-	1793	10	NNC	ENSMUSG00000039130.19	novel	1824	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	368.528237355559	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCCTGCTGCTAGAG	4	True	NA	-16	True	AATAAA	-9	NA	30391009	30366387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30366745_30370263_30370471_30372745_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.22	chr6	-	2941	2	FSM	ENSMUSG00000039130.19	ENSMUST00000152101.2	2908	2	0	-33	0	33	multi-exon	FALSE	canonical	3	1089	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTAAGGGGATGTGGTA	4	True	NA	NA	False	NA	NA	NA	30391009	30384744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30387532_30390855
ES.28146.23	chr6	-	1753	1	Intergenic	novelGene_23405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAAAATGGAAA	630	False	NA	NA	False	NA	NA	NA	30390383	30388630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30388600_30390400
ES.28146.4	chr6	-	5332	9	NIC	ENSMUSG00000039130.19	novel	1865	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	382	junction_7	209.551865596563	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTGCTAGAGAATTG	-2	True	NA	-11	True	AATAAA	-14	NA	30391015	30366382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.5	chr6	-	5288	9	NNC	ENSMUSG00000039130.19	novel	1865	11	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	365.21190338624	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGCTGCTAGAGAATT	8	True	NA	-12	True	AATAAA	-13	NA	30391005	30366383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30370471_30372736_30372950_30373241_30373483_30374796_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28146.7	chr6	-	1779	10	NNC	ENSMUSG00000039130.19	novel	1824	10	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	369.85085415744	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGCTGCTAGAGAATT	-2	True	NA	-12	True	AATAAA	-13	NA	30391015	30366383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374796_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ES.28147.1	chr6	+	1842	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-44	4103	-16	235	multi-exon	TRUE	canonical	3	95	junction_2	43.3720624650147	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAACACAAAGCTTAAAA	NA	False	NA	101	True	ATTAAA	-9	NA	30401850	30451075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.10	chr6	+	1357	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	23	2571	-5	-97	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGGAAATGTTAATTTA	-26	True	NA	NA	False	AATGAA	-21	NA	30401889	30450716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.11	chr6	+	1989	9	NIC	ENSMUSG00000029775.15	novel	5901	10	NA	NA	-2	579	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	71.2161103613501	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTCTGAACTTCCCTTG	-23	True	NA	20	True	ATTAAA	-27	NA	30401892	30451419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30402150_30427707_30427795_30439642_30439865_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.12	chr6	+	4139	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	29	-217	1	217	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAAGGTATTTTCCACT	-20	True	NA	NA	False	ATTAAA	-14	NA	30401895	30453504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.13	chr6	+	1417	8	ISM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	29	3361	1	-635	5prime_fragment	FALSE	canonical	3	93	junction_1	38.3794162519017	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACATGGACACCTTTA	-20	True	NA	NA	False	AATAAA	-22	NA	30401895	30449926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489
ES.28147.14	chr6	+	1014	7	ISM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	29	5266	1	575	5prime_fragment	FALSE	canonical	3	93	junction_1	41.4353579553609	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATAGCTGCTGAGAAT	-20	True	NA	NA	False	AATAAA	-17	NA	30401895	30448021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939
ES.28147.15	chr6	+	1313	8	NNC	ENSMUSG00000029775.15	novel	940	8	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.9514608337322	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTAGTTTATGGAC	-11	True	NA	4	True	AATACA	-18	NA	30401904	30450838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30402154_30439642_30439865_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.17	chr6	+	1550	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	11	4340	11	-2	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTAGTTTATGGAC	-10	True	NA	4	True	AATACA	-18	NA	30401905	30450838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.18	chr6	+	1981	8	NNC	ENSMUSG00000029775.15	novel	3951	9	NA	NA	11	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.4063334864122	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTCTGAACTTCCCTTG	-10	True	NA	20	True	ATTAAA	-27	NA	30401905	30451419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446706_30447939_30447988_30449489_30449630_30450485
ES.28147.19	chr6	+	2040	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	44	1867	16	580	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTGAACTTCCCTTGT	-5	True	NA	21	True	ATTAAA	-28	NA	30401910	30451420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.2	chr6	+	1661	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	5	2285	5	162	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTTGCCTTTTTTTTT	-44	True	NA	28	True	NA	NA	NA	30401871	30451002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.20	chr6	+	2812	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	47	1092	19	-1092	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCCTGCCCGGTGTGCAG	-2	True	NA	NA	False	AATAAA	-28	NA	30401913	30452195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.21	chr6	+	2166	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	193	1592	63	855	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTTGCCTCCTTTGC	144	False	NA	NA	False	NA	NA	NA	30402059	30451695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.22	chr6	+	1497	10	NNC	ENSMUSG00000029775.15	novel	1387	10	NA	NA	-27	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1604202613295	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATTGTTGCCTTTTTTT	NA	False	NA	26	True	NA	NA	NA	30417007	30451000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30417077_30417253_30417369_30427707_30427795_30439642_30439865_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.23	chr6	+	2107	9	NNC	ENSMUSG00000029775.15	novel	1387	10	NA	NA	-14	851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.2223986398177	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTTGTTGCCTCCT	NA	False	NA	NA	False	NA	NA	NA	30417020	30451691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30417077_30421547_30421682_30439642_30439865_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.24	chr6	+	5615	9	NIC	ENSMUSG00000029775.15	novel	1387	10	NA	NA	-6	8	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	65.6523752426369	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGATTGTCTGCAGTCT	NA	False	NA	39	True	AATAAA	-26	NA	30417028	30455186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30417077_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.25	chr6	+	1241	9	NIC	ENSMUSG00000029775.15	novel	1387	10	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	65.6523752426369	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTAGTTTATGGAC	NA	False	NA	4	True	AATACA	-18	NA	30417054	30450838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30417077_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.26	chr6	+	3627	1	NIC	ENSMUSG00000029775.15	novel	5901	10	NA	NA	-856	-11726	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30426538	30430165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30426500_30430200
ES.28147.27	chr6	+	6691	7	NIC	ENSMUSG00000029775.15	novel	3951	9	NA	NA	-7681	4	intron_retention	FALSE	canonical	3	178	junction_5	14.544949486181	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTATGGACATTTCA	NA	False	NA	10	True	AATACA	-24	NA	30436087	30450844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.3	chr6	+	2072	9	NNC	ENSMUSG00000029775.15	novel	3951	9	NA	NA	7	564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	69.2585734765018	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTCTTTCCAGGCAGT	-42	True	NA	5	True	ATTAAA	-12	NA	30401873	30451404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447488_30447939_30447988_30449489_30449630_30450485
ES.28147.4	chr6	+	5934	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-21	-12	7	12	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGCAGTCTGCAG	-42	True	NA	43	True	AATAAA	-30	NA	30401873	30455190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.5	chr6	+	5833	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	8	-1890	8	-1	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTGCCATGATTGT	-41	True	NA	30	True	AATAAA	-17	NA	30401874	30455177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.6	chr6	+	2156	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-11	3756	-11	582	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAACTTCCCTTGTGC	-32	True	NA	23	True	ATTAAA	-30	NA	30401883	30451422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.7	chr6	+	5975	10	NNC	ENSMUSG00000029775.15	novel	5901	10	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.0764471839393	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTCCAAGTTGCCATG	-31	True	NA	25	True	AATAAA	-12	NA	30401884	30455172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447339_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.8	chr6	+	4236	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	-7	1672	-7	219	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGGTATTTTCCACTTT	-28	True	NA	NA	False	ATTAAA	-16	NA	30401887	30453506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28147.9	chr6	+	1498	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	22	2431	-6	16	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCACTTTCTCATGTG	-27	True	NA	22	True	AATACA	-36	NA	30401888	30450856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ES.28148.1	chr6	-	175	1	Intergenic	novelGene_23406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGGAGCACACCAGGCC	NA	False	NA	NA	False	NA	NA	NA	30427254	30427079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30427100_30427300
ES.28149.1	chr6	+	919	2	NNC	ENSMUSG00000085470.2	novel	498	2	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACTGTGTCGATTTAAT	32	False	NA	NA	False	NA	NA	NA	30461027	30463312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30461594_30462959
ES.28149.2	chr6	+	3359	7	NNC	ENSMUSG00000085470.2	novel	498	2	NA	NA	120	7598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTCCTTTTCTTTGGGG	108	False	NA	NA	False	NA	NA	NA	30461103	30470910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30461129_30462959_30465516_30465837_30465924_30466266_30466344_30468785_30468869_30469635_30469813_30470555
ES.2815.1	chr10	-	155	1	Intergenic	novelGene_2144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	58279395	58279240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58279200_58279400
ES.28150.1	chr6	-	211	1	Intergenic	novelGene_23407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAAATGGACGGATCTAG	3502	False	NA	NA	False	NA	NA	NA	30474048	30473837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30473800_30474000
ES.28151.1	chr6	+	2266	5	Antisense	novelGene_ENSMUSG00000029782.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCATGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	30491475	30502574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30492724_30494738_30494834_30497165_30497240_30497818_30497992_30501898
ES.28151.2	chr6	+	2608	1	Antisense	novelGene_ENSMUSG00000029782.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCATGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	30499966	30502574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30500000_30502600
ES.28151.3	chr6	+	2772	1	Antisense	novelGene_ENSMUSG00000029782.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATTCAACAGAGGACAG	NA	False	NA	NA	False	NA	NA	NA	30499969	30502741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30500000_30502700
ES.28152.1	chr6	-	4131	16	NIC	ENSMUSG00000029782.21	novel	1905	16	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	243.217652868098	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGTGAGTATTCTA	4	True	NA	NA	False	NA	NA	NA	30509715	30479055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.10	chr6	-	2355	16	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	7	-96	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	243.217652868098	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAGTGTTTATAATCT	NA	False	NA	NA	False	TTTAAA	-5	NA	30509775	30480891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.11	chr6	-	3655	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	36	-206	2	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGTGTCACGTGTTCC	1	True	NA	NA	False	ATTAAA	-37	NA	30509746	30481020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.12	chr6	-	1757	15	NIC	ENSMUSG00000029782.21	novel	1905	16	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	254.343261947234	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTAGGATGTGTGTCA	43	False	NA	NA	False	ATTAAA	-29	NA	30509704	30481028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.13	chr6	-	4503	14	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	1	-8	intron_retention	FALSE	canonical	3	18	junction_1	259.60869507051	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTAGGATGTGTGTCA	6	True	NA	NA	False	ATTAAA	-29	NA	30509713	30481028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30508512_30508664_30508802_30509683
ES.28152.15	chr6	-	4743	12	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	1	-13	intron_retention	FALSE	canonical	3	18	junction_1	277.942529287579	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCTCCTAGGATGTG	-1	True	NA	NA	False	ATTAAA	-24	NA	30509720	30481033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30508802_30509683
ES.28152.16	chr6	-	2180	16	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	1	-18	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	243.217652868098	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCACAAATCCTCCTAGG	0	True	NA	NA	False	ATTAAA	-19	NA	30509747	30481038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.17	chr6	-	2101	14	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	-1	-19	intron_retention	FALSE	canonical	3	18	junction_1	338.898302107871	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACAAATCCTCCTAG	3	True	NA	NA	False	ATTAAA	-18	NA	30509716	30481039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30508452_30508512_30508664_30508802_30509683
ES.28152.18	chr6	-	3631	15	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	0	-19	intron_retention	FALSE	canonical	3	18	junction_1	249.563220488132	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCACAAATCCTCCTAG	44	False	NA	NA	False	ATTAAA	-18	NA	30509703	30481039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.19	chr6	-	3569	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	-12	-72	-12	72	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTTTCATTACTAGGA	NA	False	NA	63	True	AATATA	-22	NA	30509794	30481154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.2	chr6	-	3898	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	2	-1627	0	9	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGACTCGTTCTTC	4	True	NA	NA	False	AATATA	-33	NA	30509715	30480786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ES.28152.20	chr6	-	3313	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	65	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	264.541872615403	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGTTTGTTTTCATT	0	True	NA	56	True	AATATA	-15	NA	30509747	30481161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.22	chr6	-	3313	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	262.288336754864	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGTGAAATCATTTGAA	0	True	NA	-9	True	AATAAA	-19	NA	30509747	30481226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30509683
ES.28152.23	chr6	-	3631	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-10006	-2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	251.475563790348	730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGGTGAAATCATTTG	NA	False	NA	-11	True	AATAAA	-17	NA	30519788	30481228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30519541
ES.28152.25	chr6	-	3436	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	255.585931473833	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGGTGAAATCATTTG	2	True	NA	-11	True	AATAAA	-17	NA	30509717	30481228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508530_30508664_30508802_30509683
ES.28152.27	chr6	-	3508	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	-50	-1185	15	-2	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGGTGAAATCATTTG	NA	False	NA	-11	True	AATAAA	-17	NA	30509767	30481228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ES.28152.3	chr6	-	2427	16	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	243.217652868098	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGACTCGTTCTTC	5	True	NA	NA	False	AATATA	-33	NA	30509742	30480786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.30	chr6	-	3272	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	3	49	junction_11	251.613679649939	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTGGTGAAATCAT	13	True	NA	-14	True	AATAAA	-14	NA	30509706	30481231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30508452_30508512_30508664_30508802_30509683
ES.28152.31	chr6	-	7894	13	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	776	junction_12	63.7656298922512	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTGGTGAAATCAT	-3	True	NA	-14	True	AATAAA	-14	NA	30509722	30481231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30487448_30489291_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.33	chr6	-	3332	16	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.567903143091	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTGGTGAAATCAT	0	True	NA	-14	True	AATAAA	-14	NA	30509747	30481231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482220_30482332_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.35	chr6	-	5756	13	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	-7	intron_retention	FALSE	canonical	3	776	junction_12	66.9047311896218	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	6	True	NA	-16	True	AATAAA	-12	NA	30509713	30481233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30508512_30508664_30508802_30509683
ES.28152.38	chr6	-	4915	13	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	776	junction_12	64.320810525573	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	-3	True	NA	-16	True	AATAAA	-12	NA	30509722	30481233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489590_30491085_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.39	chr6	-	3069	13	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	367.308103716152	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	7	True	NA	-16	True	AATAAA	-12	NA	30509712	30481233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30505731_30505974_30506784_30506917_30508452_30508512_30509683
ES.28152.4	chr6	-	3899	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	26	-440	-8	9	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGACTCGTTCTTC	-9	True	NA	NA	False	AATATA	-33	NA	30509756	30480786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.40	chr6	-	3471	16	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	330.809404676201	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTGCCTTGGTGAAAT	44	False	NA	-17	True	AATAAA	-11	NA	30509703	30481234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30485202_30485276_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.42	chr6	-	3387	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	256.063528469489	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTGCCTTGGTGAAAT	-6	True	NA	-17	True	AATAAA	-11	NA	30509725	30481234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501932_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.43	chr6	-	3842	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	30	-8	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	251.475563790348	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTGCCTTGGTGAAAT	74	False	NA	-17	True	AATAAA	-11	NA	30509673	30481234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509209
ES.28152.45	chr6	-	2761	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	74	650	-5	537	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATGGGATGTGCCGTC	11	True	NA	NA	False	TATAAA	-25	NA	30509708	30481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.46	chr6	-	2202	14	FSM	ENSMUSG00000029782.21	ENSMUST00000102991.9	1718	14	-13	-471	-4	85	multi-exon	FALSE	canonical	1	3	junction_5	263.056724370784	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACGGTTCACTGCTT	-8	True	NA	-2	True	ATTAAA	-34	NA	30509727	30482328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.47	chr6	-	2393	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	-10	1102	-10	85	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACGGTTCACTGCTT	NA	False	NA	-2	True	ATTAAA	-34	NA	30509792	30482328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.48	chr6	-	2230	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	2	43	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	248.162276154379	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAACTTTTGGGTTT	7	True	NA	25	True	ATTAAA	-11	NA	30509712	30482370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508761_30509683
ES.28152.5	chr6	-	3645	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	9	intron_retention	FALSE	canonical	1	2	junction_9	264.541872615403	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGACTCGTTCTTC	43	False	NA	NA	False	AATATA	-33	NA	30509704	30480786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.50	chr6	-	2281	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	255.585931473833	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAACTTTTGGGTTT	43	False	NA	25	True	ATTAAA	-11	NA	30509704	30482370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508530_30508664_30508802_30509683
ES.28152.51	chr6	-	2490	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-10007	43	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	251.475563790348	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAACTTTTGGGTTT	NA	False	NA	25	True	ATTAAA	-11	NA	30519789	30482370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30519541
ES.28152.52	chr6	-	2343	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	-29	-41	2	41	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTAAACTTTTGGGT	1	True	NA	23	True	ATTAAA	-9	NA	30509746	30482372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ES.28152.53	chr6	-	2093	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_11	251.613679649939	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAAGGTCAATGCTT	43	False	NA	-13	True	ATTAAA	-21	NA	30509704	30482408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30508452_30508512_30508664_30508802_30509683
ES.28152.55	chr6	-	2168	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	256.052619353037	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAAGGTCAATGCTT	-3	True	NA	-13	True	ATTAAA	-21	NA	30509722	30482408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505899_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.56	chr6	-	2224	16	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	247.567903143091	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTGAAAGGTCAATGCT	0	True	NA	-14	True	ATTAAA	-20	NA	30509747	30482409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482797_30482839_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.57	chr6	-	3725	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	776	junction_13	63.1617628318247	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	6	True	NA	-18	True	ATTAAA	-16	NA	30509713	30482413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.58	chr6	-	3643	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	776	junction_13	64.178836674741	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCATCTTGAAAGGTCA	3	True	NA	-19	True	ATTAAA	-15	NA	30509716	30482414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.6	chr6	-	4079	9	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	3223	2	intron_retention	FALSE	canonical	0	0	junction_1	319.734044754386	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGTGTGCAGACTC	3267	False	NA	NA	False	AATATA	-26	NA	30506480	30480793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30487373_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731
ES.28152.60	chr6	-	9578	9	NIC	ENSMUSG00000029782.21	novel	1718	14	NA	NA	3	-4	intron_retention	FALSE	canonical	3	776	junction_8	73.150102528978	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	8	True	NA	-22	True	ATTAAA	-12	NA	30509711	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30508512_30508664_30508802_30509683
ES.28152.61	chr6	-	2161	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	255.585931473833	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	7	True	NA	-22	True	ATTAAA	-12	NA	30509712	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508727_30508802_30509683
ES.28152.62	chr6	-	2660	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	251.475563790348	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	73	False	NA	-22	True	ATTAAA	-12	NA	30509674	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509209
ES.28152.64	chr6	-	2364	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	245.869012745753	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	74	False	NA	-22	True	ATTAAA	-12	NA	30509673	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509504
ES.28152.66	chr6	-	2093	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	262.288336754864	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	1	True	NA	-22	True	ATTAAA	-12	NA	30509718	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30509683
ES.28152.67	chr6	-	2458	16	NNC	ENSMUSG00000029782.21	novel	2273	15	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	390.653435498354	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	8	True	NA	-22	True	ATTAAA	-12	NA	30509711	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508168_30508364_30508452_30508512_30508664_30508842_30509683
ES.28152.68	chr6	-	3952	11	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	1659	4	1645	-4	intron_retention	FALSE	canonical	3	922	junction_8	39.7461947864195	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	1689	False	NA	-22	True	ATTAAA	-12	NA	30508058	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731
ES.28152.69	chr6	-	2863	13	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	6	-4	intron_retention	FALSE	canonical	1	2	junction_9	275.019645762908	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	5	True	NA	-22	True	ATTAAA	-12	NA	30509742	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30505731_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.70	chr6	-	2103	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	255.663771946113	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGGCATCTTGAAAGG	3	True	NA	-22	True	ATTAAA	-12	NA	30509716	30482417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502105_30505859_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.74	chr6	-	1888	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	39	1558	5	15	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTTGTGAGCATAGCA	4	True	NA	NA	False	NA	NA	NA	30509743	30482784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.75	chr6	-	3824	6	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	-8375	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	383.045898033121	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	9194	False	NA	NA	False	NA	NA	NA	30500553	30490354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30498128_30498164
ES.28152.76	chr6	-	2092	11	ISM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	79	9128	0	0	5prime_fragment	FALSE	canonical	3	776	junction_10	59.3720472950024	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	44	False	NA	NA	False	NA	NA	NA	30509703	30490354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.77	chr6	-	177	1	Intergenic	novelGene_23408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTTTTAGATAGACTTA	NA	False	NA	NA	False	NA	NA	NA	30511061	30510884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30510900_30511100
ES.28152.8	chr6	-	2003	15	NIC	ENSMUSG00000029782.21	novel	1905	16	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	254.343261947234	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGTGTGCAGACTC	4	True	NA	NA	False	AATATA	-26	NA	30509715	30480793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30481137_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28152.9	chr6	-	3801	15	NNC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	1	-13	intron_retention	FALSE	canonical	0	0	junction_9	256.063528469489	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTTGAATGGCAAAGA	6	True	NA	NA	False	AATATA	-11	NA	30509713	30480808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501932_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ES.28153.1	chr6	-	169	1	Intergenic	novelGene_23409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	30530975	30530806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30530800_30531000
ES.28154.1	chr6	+	175	1	Intergenic	novelGene_23410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	30537391	30537566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30537400_30537600
ES.28155.1	chr6	+	1128	9	NNC	ENSMUSG00000071553.11	novel	450	4	NA	NA	758	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.72281815295886	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGCTTCTGGTCATT	250	False	NA	NA	False	ATTAAA	-18	NA	30545241	30564471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30545351_30545502_30545599_30547103_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
ES.28155.2	chr6	+	1090	7	ISM	ENSMUSG00000071553.11	ENSMUST00000096066.5	1388	11	5356	4	296	-4	3prime_fragment	FALSE	canonical	2	2	junction_5	2.98142396999972	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGCTTCTGGTCATT	1945	False	NA	NA	False	ATTAAA	-18	NA	30546936	30564471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_30547206_30549240_30549340_30550743_30550855_30551964_30552056_30554162_30554363_30557670_30557756_30564236
ES.28156.1	chr6	-	157	1	Intergenic	novelGene_23411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATAACTTT	NA	False	NA	NA	False	NA	NA	NA	30557237	30557080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30557100_30557200
ES.28157.1	chr6	+	2206	1	Antisense	novelGene_ENSMUSG00000029790.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTCAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	30659652	30661858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30659700_30661900
ES.28158.1	chr6	-	11836	10	NIC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-10	3127	intron_retention	TRUE	canonical	3	75	junction_7	8.09358837843303	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTTTAATCTCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	30693758	30650328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.10	chr6	-	3628	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	40.8621953431832	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCGTTTGCTATTA	-9	True	NA	-3	True	ATTAAA	-13	NA	30693716	30653458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671204_30671370_30673309_30673409_30680129_30680194_30693635
ES.28158.11	chr6	-	3471	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.3719317216209	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCGTTTGCTATTA	2	True	NA	-3	True	ATTAAA	-13	NA	30693705	30653458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30680702_30680773_30693635
ES.28158.12	chr6	-	1238	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	6	2203	6	-128	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTCAGCGCTCCCAAC	NA	False	NA	-5	True	AATAAA	-17	NA	30693742	30655658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.2	chr6	-	3533	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	32	-118	-17	118	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCCAGAAAGGCGTATG	-9	True	NA	NA	False	NA	NA	NA	30693716	30653337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.3	chr6	-	3523	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.3970126248436	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGTTTGCTATTAATGT	-22	True	NA	1	True	ATTAAA	-17	NA	30693729	30653454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657335_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30661721_30661855_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.4	chr6	-	3537	12	FSM	ENSMUSG00000029790.17	ENSMUST00000140211.8	3522	12	-12	-3	-5	1	multi-exon	FALSE	canonical	0	0	junction_7	34.0944240612173	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGTTTGCTATTAATGT	3	True	NA	1	True	ATTAAA	-17	NA	30693704	30653454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30661721_30661855_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.5	chr6	-	3442	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	5	0	5	0	multi-exon	FALSE	canonical	3	75	junction_8	9.18095855561934	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	NA	False	NA	0	True	ATTAAA	-16	NA	30693743	30653455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.6	chr6	-	3389	11	NNC	ENSMUSG00000029790.17	novel	3447	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	26.0624250598443	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	-22	True	NA	0	True	ATTAAA	-16	NA	30693729	30653455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657335_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ES.28158.7	chr6	-	3500	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	35.1135113266382	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTCGTTTGCTATTAA	3	True	NA	-2	True	ATTAAA	-14	NA	30693704	30653457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30673309_30673409_30680129_30680194_30693635
ES.28158.9	chr6	-	3887	12	NNC	ENSMUSG00000029790.17	novel	3522	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.3719317216209	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTCGTTTGCTATTAA	NA	False	NA	-2	True	ATTAAA	-14	NA	30693761	30653457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30680343_30680773_30693635
ES.28159.1	chr6	+	2610	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	-46	-3	-46	0	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGGCTTCCCCTCCCCC	NA	False	NA	16	True	AATAAA	-22	NA	30738002	30748464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.11	chr6	+	2388	10	NNC	ENSMUSG00000051855.16	novel	2561	12	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	102.770510253563	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGATTCCGGCTTCC	1	True	NA	8	True	AATAAA	-14	NA	30738052	30748456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30747073
ES.28159.12	chr6	+	3162	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4	-605	1	602	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTTCTATTATTTTAG	1	True	NA	NA	False	AATAGA	-22	NA	30738052	30749066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.13	chr6	+	1574	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4	983	1	-983	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGCATTAGATATTC	1	True	NA	NA	False	NA	NA	NA	30738052	30747478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.15	chr6	+	2510	13	NNC	ENSMUSG00000051855.16	novel	2665	13	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	96.2838324376886	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGGATTCCGGCTT	1	True	NA	6	True	AATAAA	-12	NA	30738052	30748454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050_30747952_30747991
ES.28159.17	chr6	+	1268	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	98	1195	93	-1195	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTTCATCAAAGTCCAT	95	False	NA	NA	False	NA	NA	NA	30738146	30747266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.18	chr6	+	2380	12	NNC	ENSMUSG00000051855.16	novel	467	5	NA	NA	358	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.8129319959523	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGGATTCCGGCTT	360	False	NA	6	True	AATAAA	-12	NA	30738411	30748454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738524_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.19	chr6	+	2499	12	NNC	ENSMUSG00000051855.16	novel	2665	13	NA	NA	-601	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.8129319959523	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGATTCCGGCTTCC	2128	False	NA	8	True	AATAAA	-14	NA	30740179	30748456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30740409_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.2	chr6	+	1694	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	-6	873	-6	-873	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTTCCGGCCCAATCC	NA	False	NA	NA	False	ATTAAA	-13	NA	30738042	30747588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.3	chr6	+	1550	12	NNC	ENSMUSG00000051855.16	novel	2561	12	NA	NA	1	-1025	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	99.9940494097292	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGACATTCTGACTA	-2	True	NA	NA	False	AATAAA	-22	NA	30738049	30747436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743087_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.4	chr6	+	2654	13	NNC	ENSMUSG00000051855.16	novel	2665	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	140.934874636794	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGATTCCGGCTTCC	0	True	NA	8	True	AATAAA	-14	NA	30738051	30748456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744391_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.6	chr6	+	2488	11	NIC	ENSMUSG00000051855.16	novel	2561	12	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	99.144339223175	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGATTCCGGCTTCC	1	True	NA	8	True	AATAAA	-14	NA	30738052	30748456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30747050
ES.28159.7	chr6	+	1977	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4	580	1	-580	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGAGTATGAGTCTAAG	1	True	NA	NA	False	AATACA	-3	NA	30738052	30747881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.8	chr6	+	2096	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	4	461	1	-461	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGCAGAATTTCCTAAAA	1	True	NA	NA	False	AATAAA	-13	NA	30738052	30748000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ES.28159.9	chr6	+	2459	12	NNC	ENSMUSG00000051855.16	novel	2561	12	NA	NA	1	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	100.530247082718	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGAGTGTTTATTTT	1	True	NA	-36	True	TTTAAA	-35	NA	30738052	30748412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745865_30746268_30746325_30747050
ES.2816.1	chr10	+	10962	30	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-1308	580	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	79.7409151897025	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGTTGTCTGTTCCTTC	NA	False	NA	48	True	TTTAAA	-20	NA	58281433	58330758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58281598_58282133_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.10	chr10	+	10608	29	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-58	955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	77.6440317298458	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGTTAGACCATACAATC	NA	False	NA	4	True	AATAAA	-14	NA	58282683	58331133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326563_58328232_58328507_58328623_58328959_58329484
ES.2816.11	chr10	+	12423	28	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-52	557	intron_retention	FALSE	non_canonical	0	0	junction_6	81.8885287359955	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATTTGATTACTTGT	NA	False	NA	25	True	AATAAA	-28	NA	58282689	58330735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293418_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.12	chr10	+	8866	27	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-53	1438	-51	-1438	intron_retention	FALSE	canonical	3	152	junction_18	62.0628141434811	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATCCCTTGCAGCAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	58282690	58328740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232
ES.2816.14	chr10	+	10809	29	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-50	1152	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	80.7371017057012	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTCCATTTAGTGGC	NA	False	NA	NA	False	AATAAA	-28	NA	58282691	58331330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287808_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.15	chr10	+	7907	20	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-50	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	91.9228569744709	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGGTGTACTTATTT	NA	False	NA	16	True	AATAAA	-17	NA	58282691	58329993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291134_58301495_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.18	chr10	+	4321	5	ISM	ENSMUSG00000003226.8	ENSMUST00000219332.2	2609	6	-47	-28	-47	28	intron_retention	FALSE	canonical	3	167	junction_4	13.9283882771841	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAAACTTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	58282694	58294849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040
ES.2816.19	chr10	+	4178	5	ISM	ENSMUSG00000003226.8	ENSMUST00000219332.2	2609	6	-46	114	-46	-114	intron_retention	FALSE	canonical	3	167	junction_4	13.9283882771841	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAGCACAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	58282695	58294707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040
ES.2816.2	chr10	+	9642	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-179	145	-177	-145	multi-exon	FALSE	canonical	3	152	junction_18	69.5662490738439	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGAATGGCTAATAC	NA	False	NA	56	True	NA	NA	NA	58282564	58330033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.20	chr10	+	2293	7	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-47	35359	-45	-2	5prime_fragment	FALSE	canonical	3	167	junction_4	13.5615879109589	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58282696	58294819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413
ES.2816.21	chr10	+	8591	27	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-44	1704	-42	-1704	5prime_fragment	FALSE	canonical	3	152	junction_18	62.0628141434811	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGTCTGGACTGCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	58282699	58328474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232
ES.2816.22	chr10	+	10891	28	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-38	546	intron_retention	FALSE	canonical	3	152	junction_18	70.3638008629387	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATGACATTTAAAACATT	NA	False	NA	14	True	AATAAA	-17	NA	58282703	58330724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.24	chr10	+	6846	22	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-35	545	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	96.8019930080995	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCATGACATTTAAAACAT	NA	False	NA	13	True	AATAAA	-16	NA	58282706	58330723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321930_58322521_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.27	chr10	+	10903	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-30	-1265	-28	1265	multi-exon	FALSE	canonical	3	152	junction_18	69.5662490738439	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCTGTACCCCAAGA	NA	False	NA	NA	False	AGTAAA	-21	NA	58282713	58331443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.28	chr10	+	11485	28	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-27	1151	intron_retention	FALSE	canonical	3	152	junction_18	70.3638008629387	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGTCCATTTAGTGG	NA	False	NA	NA	False	AATAAA	-27	NA	58282714	58331329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.29	chr10	+	9844	28	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-27	545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	82.6792271089666	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCATGACATTTAAAACAT	NA	False	NA	13	True	AATAAA	-16	NA	58282714	58330723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287808_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58329484
ES.2816.3	chr10	+	10342	30	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-143	545	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	88.7213168132378	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCATGACATTTAAAACAT	NA	False	NA	13	True	AATAAA	-16	NA	58282598	58330723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293273_58293318_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.30	chr10	+	732	6	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	2	38508	2	-3151	5prime_fragment	FALSE	canonical	3	167	junction_4	14.8054044186574	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTGGAGAGCAACCAAT	NA	False	NA	NA	False	GATAAA	-2	NA	58282745	58291670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630
ES.2816.31	chr10	+	10028	28	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	5060	-548	4787	548	3prime_fragment	FALSE	canonical	3	152	junction_17	70.733895344575	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACATTTAAAACATTTG	NA	False	NA	16	True	AATAAA	-19	NA	58287803	58330726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.32	chr10	+	8075	15	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	18740	-579	18467	579	3prime_fragment	FALSE	canonical	3	152	junction_4	75.9262867550374	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGTTGTCTGTTCCTT	NA	False	NA	47	True	TTTAAA	-19	NA	58301483	58330757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.33	chr10	+	6899	12	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	23703	187	23430	-187	3prime_fragment	FALSE	canonical	3	152	junction_1	63.7692119811294	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCAGGTGTACTTAT	NA	False	NA	14	True	AATAAA	-15	NA	58306446	58329991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.34	chr10	+	6613	10	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	28975	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	134.7299997755	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTATTTCAGGTGTACT	NA	False	NA	11	True	AATAAA	-12	NA	58311991	58329988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328239_58328507_58328653_58328959_58329484
ES.2816.35	chr10	+	7223	10	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	28985	546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.125791786628	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATGACATTTAAAACATT	NA	False	NA	14	True	AATAAA	-17	NA	58312001	58330724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321551_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.37	chr10	+	4107	9	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	30914	548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	107.590586832678	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACATTTAAAACATTTG	NA	False	NA	16	True	AATAAA	-19	NA	58313930	58330726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328492_58330476
ES.2816.38	chr10	+	6142	9	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	31699	-183	intron_retention	FALSE	canonical	3	267	junction_1	34.2141692139382	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTGTACTTATTTTT	NA	False	NA	18	True	AATAAA	-19	NA	58314715	58329995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.39	chr10	+	4559	9	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	31931	558	intron_retention	FALSE	canonical	3	267	junction_1	38.5727802342533	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTGATTACTTGTG	NA	False	NA	26	True	AATAAA	-29	NA	58314947	58330736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328959_58329484
ES.2816.4	chr10	+	4857	4	ISM	ENSMUSG00000003226.8	ENSMUST00000219332.2	2609	6	-90	-28	-90	28	intron_retention	FALSE	canonical	3	183	junction_3	8.99382504215469	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAAACTTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	58282651	58294849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394
ES.2816.40	chr10	+	6973	8	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	32290	542	intron_retention	FALSE	canonical	3	270	junction_1	28.040058808055	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCCATGACATTTAAAA	NA	False	NA	10	True	AATAAA	-13	NA	58315306	58330720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.41	chr10	+	3160	10	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	32466	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.14787289847	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGGTGTACTTATTT	NA	False	NA	16	True	AATAAA	-17	NA	58315482	58329993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58316642_58318850_58319022_58319722_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.42	chr10	+	5058	8	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	33479	-184	intron_retention	FALSE	canonical	3	270	junction_1	28.040058808055	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGTGTACTTATTTT	NA	False	NA	17	True	AATAAA	-18	NA	58316495	58329994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.43	chr10	+	3671	7	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	35388	-188	intron_retention	FALSE	canonical	3	270	junction_1	26.6645832519468	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTTCAGGTGTACTTA	NA	False	NA	13	True	AATAAA	-14	NA	58318404	58329990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623
ES.2816.44	chr10	+	1413	1	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	40885	-4864	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAGAAGGAAAGA	328	False	NA	NA	False	NA	NA	NA	58323901	58325314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58323900_58325300
ES.2816.45	chr10	+	1266	4	ISM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	43686	185	43413	-185	3prime_fragment	FALSE	canonical	3	339	junction_2	12.4988888395018	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGGTGTACTTATTT	1743	False	NA	16	True	AATAAA	-17	NA	58326429	58329993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.6	chr10	+	10132	29	NNC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	-89	545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	80.5271534886189	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCATGACATTTAAAACAT	NA	False	NA	13	True	AATAAA	-16	NA	58282652	58330723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297769_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.2816.9	chr10	+	10629	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	-62	-959	-60	959	multi-exon	FALSE	canonical	3	152	junction_18	69.5662490738439	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGACCATACAATCTTCT	NA	False	NA	8	True	AATAAA	-18	NA	58282681	58331137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ES.28160.1	chr6	+	800	1	Intergenic	novelGene_23412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCTCGGGCAGGACAAG	NA	False	NA	NA	False	AAAAAG	-4	NA	30797794	30798594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_30797800_30798600
ES.28161.1	chr6	-	4013	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-51	-1	4	1	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTGTTATTATGTTT	NA	False	NA	0	True	AATAAA	-17	NA	30873725	30747551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.10	chr6	-	2993	23	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	50.0318080642886	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTTGCTATACTTGAAA	NA	False	NA	-9	True	AATAAA	-20	NA	30873685	30748405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.11	chr6	-	3080	24	NNC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	48.4633433862534	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTTGCTATACTTGAA	NA	False	NA	-10	True	AATAAA	-19	NA	30873686	30748406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749860_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.13	chr6	-	3189	24	NNC	ENSMUSG00000025607.16	novel	3155	24	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.8104624812862	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873712	30748410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790770_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.14	chr6	-	3058	23	NIC	ENSMUSG00000025607.16	novel	3155	24	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	50.0108252744153	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873701	30748410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30871781_30871863_30872476_30872530_30873595
ES.28161.16	chr6	-	3345	25	NNC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	60.9442909321474	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873439	30748410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30872993_30873177_30873301
ES.28161.18	chr6	-	2780	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-12	1193	-3	-335	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAATCCAAGTGTTTG	NA	False	NA	NA	False	CATAAA	-23	NA	30873686	30748745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.19	chr6	-	5145	1	NIC	ENSMUSG00000025607.16	novel	1915	13	NA	NA	37690	4835	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAGAAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	30835671	30830526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30830500_30835700
ES.28161.2	chr6	-	4167	25	NNC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_23	59.2400952808897	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTTGTTGTTATTAT	NA	False	NA	-4	True	AATAAA	-13	NA	30873700	30747555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30872993_30873177_30873595
ES.28161.20	chr6	-	205	1	Intergenic	novelGene_23413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACAAGCCAGCTCTGAAA	NA	False	NA	NA	False	AATACA	-7	NA	30844565	30844360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_30844400_30844600
ES.28161.21	chr6	-	397	4	NNC	ENSMUSG00000025607.16	novel	333	4	NA	NA	-3	1461	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	102.009803450453	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAGAGTTTTAATAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	30873686	30870370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30870543_30871781_30871863_30872476_30872530_30873595
ES.28161.3	chr6	-	3198	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-83	846	-28	12	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATACTTGAAATTTCTAA	NA	False	NA	-2	True	AATAAA	-27	NA	30873757	30748398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.4	chr6	-	3032	23	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-4	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	49.2322250509874	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTATACTTGAAATTTC	NA	False	NA	-5	True	AATAAA	-24	NA	30873687	30748401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.5	chr6	-	3302	25	NNC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_23	59.2400952808897	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTATACTTGAAATTTC	NA	False	NA	-5	True	AATAAA	-24	NA	30873681	30748401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30872993_30873177_30873595
ES.28161.6	chr6	-	3271	25	NNC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	60.8191764349224	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATACTTGAAAT	NA	False	NA	-8	True	AATAAA	-21	NA	30873686	30748404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873026_30873177_30873595
ES.28161.7	chr6	-	2721	20	NIC	ENSMUSG00000025607.16	novel	3961	24	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	50.8550708105575	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATACTTGAAAT	NA	False	NA	-8	True	AATAAA	-21	NA	30873700	30748404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28161.9	chr6	-	3173	24	NNC	ENSMUSG00000025607.16	novel	3155	24	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	62.5706103969286	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATACTTGAAAT	NA	False	NA	-8	True	AATAAA	-21	NA	30873696	30748404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_30748987_30749404_30749501_30749759_30749944_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ES.28162.1	chr6	+	3496	1	Antisense	novelGene_ENSMUSG00000073209.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	CATAAA	-23	NA	30935002	30938498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_30935000_30938500
ES.28163.1	chr6	-	2228	4	FSM	ENSMUSG00000044471.13	ENSMUST00000187876.7	656	4	-3	-1569	-3	1569	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTCTTTTCTATCTTT	6917	False	NA	NA	False	ACTAAA	-17	NA	31195412	31068924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_31070531_31116663_31116722_31143410_31143571_31195008
ES.28163.2	chr6	-	670	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	128	-113	128	113	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAAGT	7246	False	NA	NA	False	ATTAAA	-19	NA	31119470	31118800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_31118800_31119500
ES.28163.3	chr6	-	186	1	Intergenic	novelGene_23414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	9954	False	NA	NA	False	NA	NA	NA	31121767	31121581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_31121600_31121800
ES.28163.4	chr6	-	2252	1	Intergenic	novelGene_23415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAGCATCTGACTCAAT	8910	False	NA	NA	False	AATAAA	-13	NA	31187702	31185450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_31185400_31187700
ES.28164.1	chr6	+	2775	19	Fusion	ENSMUSG00000086931.2_ENSMUSG00000025609.16	novel	888	6	NA	NA	13723	0	multi-exon	FALSE	canonical	0	0	junction_1	209.548161764224	436	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31347400	31484903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31347624_31349209_31349430_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.10	chr6	+	4961	18	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-16	-1059	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	168.454546557982	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGCTTAGTATGGAAC	NA	False	NA	NA	False	CATAAA	-20	NA	31375746	31483723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31480893
ES.28164.11	chr6	+	5694	12	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-16	3898	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	209.617124402982	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGAAGTAATAACATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	31375746	31488801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31395865_31395936_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.12	chr6	+	6407	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	77	4911	-16	3932	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTGCCATTTTCTT	NA	False	NA	NA	False	AGTAAA	-30	NA	31375746	31488835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.14	chr6	+	5309	1	FSM	ENSMUSG00000025609.16	ENSMUST00000202577.2	5628	1	-21	340	-4	-340	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCCTTATATCACTTT	NA	False	NA	NA	False	NA	NA	NA	31375758	31381067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375800_31381100
ES.28164.15	chr6	+	6795	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	89	4511	-4	4332	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAATTTTCAGTTGAAG	NA	False	NA	NA	False	NA	NA	NA	31375758	31489235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.16	chr6	+	3248	4	FSM	ENSMUSG00000025609.16	ENSMUST00000134544.8	3054	4	-15	-179	1	179	multi-exon	FALSE	canonical	3	539	junction_3	42.5284218689886	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTACAACAAAATTCATAT	NA	False	NA	NA	False	NA	NA	NA	31375764	31407981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071
ES.28164.17	chr6	+	2251	17	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	4553	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_16	168.346728788385	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAAATTACGTTA	NA	False	NA	NA	False	NA	NA	NA	31375770	31474181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31473982
ES.28164.18	chr6	+	6739	19	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	114950	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	167.353104926067	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGATCAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	31375770	31608696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559_31489161_31608665
ES.28164.2	chr6	+	2557	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	-67	0	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	436	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31349762	31484903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.20	chr6	+	2307	16	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	182.143484343769	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31375770	31484903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.21	chr6	+	6800	18	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	4328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	172.173305302604	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACCAATTTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	31375770	31489231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428432_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.22	chr6	+	6163	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	101	5131	0	3712	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTGAATTGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	31375770	31488615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.23	chr6	+	2477	17	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	102	16499	1	-7535	5prime_fragment	FALSE	canonical	1	225	junction_9	99.0804400159285	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTGTTATTTGTTGA	NA	False	NA	NA	False	NA	NA	NA	31375771	31477247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821
ES.28164.24	chr6	+	3765	10	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	1	23	combination_of_known_junctions	FALSE	canonical	1	20	junction_5	205.267305401193	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGAAAAATACTTCC	NA	False	NA	NA	False	AAGAAA	-2	NA	31375771	31447847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409870_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065
ES.28164.25	chr6	+	6727	18	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	2	4290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	172.070859307546	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31375772	31489193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410055_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.26	chr6	+	4393	17	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-4	2	intron_retention	FALSE	canonical	1	225	junction_8	102.941408547533	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTATATTTTTCTTTAG	NA	False	NA	19	True	AATAAA	-27	NA	31375775	31484905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.29	chr6	+	3312	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	114	7969	4	874	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGCCCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-12	NA	31375783	31485777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.3	chr6	+	6444	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	-22	3932	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTGCCATTTTCTT	NA	False	NA	NA	False	AGTAAA	-30	NA	31349807	31488835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.30	chr6	+	4525	17	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	4	-1	intron_retention	FALSE	canonical	1	225	junction_9	102.894894795612	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTATATTTTTCTT	NA	False	NA	16	True	AATAAA	-24	NA	31375783	31484902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.31	chr6	+	2302	17	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	171.324618779672	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAATTATGTATATTTT	NA	False	NA	12	True	AATAAA	-20	NA	31375783	31484898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31484635
ES.28164.32	chr6	+	5945	14	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	4	3919	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	192.260024861549	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGCTATACAATGTGT	NA	False	NA	NA	False	ATTAAA	-34	NA	31375783	31488822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31375890_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.33	chr6	+	2479	18	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	215.359745702868	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTATGTATATTTTT	NA	False	NA	13	True	AATAAA	-21	NA	31375789	31484899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31375890_31395865_31395984_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435886_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.34	chr6	+	9012	1	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-8677	149	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CGAAAAAAAAAAAAAAAAAA	103	False	NA	NA	False	NA	NA	NA	31398939	31407951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31398900_31408000
ES.28164.35	chr6	+	6048	15	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	29399	4917	-2548	3926	3prime_fragment	FALSE	canonical	1	225	junction_6	108.411371683067	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACAATGTGTGTGCCAT	6232	False	NA	NA	False	ATTAAA	-41	NA	31405068	31488829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.36	chr6	+	5664	12	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	46824	8843	14843	0	3prime_fragment	FALSE	canonical	1	225	junction_3	120.988422368041	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31422493	31484903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.37	chr6	+	5543	11	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-18625	3928	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	177.748389584829	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATGTGTGTGCCATTT	NA	False	NA	NA	False	ATTAAA	-43	NA	31426429	31488831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31426509_31428453_31428520_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.38	chr6	+	4480	1	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	-1687	23	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGAAAAATACTTCC	NA	False	NA	NA	False	AAGAAA	-2	NA	31443367	31447847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31443400_31447800
ES.28164.39	chr6	+	3086	9	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	67780	8843	-1605	0	3prime_fragment	FALSE	canonical	3	580	junction_3	39.2999284350493	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31443449	31484903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.4	chr6	+	6516	20	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	-16	3927	multi-exon	FALSE	canonical	1	6	junction_9	256.385930098269	449	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAATGTGTGTGCCATT	NA	False	NA	NA	False	ATTAAA	-42	NA	31349813	31488830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31426758_31426842_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.40	chr6	+	10170	9	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	69538	1	153	-1	3prime_fragment	FALSE	canonical	3	580	junction_3	39.2999284350493	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTTGCCAAAATTACT	NA	False	NA	NA	False	AATAAA	-16	NA	31445207	31493745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.41	chr6	+	8614	1	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	11058	4324	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGCACCAATTTTC	NA	False	NA	NA	False	NA	NA	NA	31480613	31489227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_31480600_31489200
ES.28164.42	chr6	+	174	1	Intergenic	novelGene_23418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31512226	31512400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31512200_31512400
ES.28164.43	chr6	+	2882	1	Intergenic	novelGene_23419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAGAAGAAGAAG	3957	False	NA	NA	False	NA	NA	NA	31536150	31539032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31536200_31539000
ES.28164.44	chr6	+	151	1	Intergenic	novelGene_23420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	31597382	31597533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31597400_31597500
ES.28164.45	chr6	+	214	1	Intergenic	novelGene_23421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGCCTCCACAGTGTT	NA	False	NA	NA	False	NA	NA	NA	31607691	31607905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31607700_31607900
ES.28164.5	chr6	+	2539	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	-15	-1	multi-exon	FALSE	canonical	0	0	junction_1	209.130423302343	436	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTATATTTTTCTT	NA	False	NA	16	True	AATAAA	-24	NA	31349814	31484902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31349909_31390726_31390841_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.6	chr6	+	6814	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	8	4332	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAATTTTCAGTTGAAG	NA	False	NA	NA	False	NA	NA	NA	31349837	31489235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28164.7	chr6	+	3575	1	Intergenic	novelGene_23416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGACAGCTA	NA	False	NA	NA	False	NA	NA	NA	31367573	31371148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31367600_31371100
ES.28164.8	chr6	+	172	1	Intergenic	novelGene_23417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	31371449	31371621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_31371400_31371600
ES.28164.9	chr6	+	2546	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	74	8775	-19	68	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTTTTCAAAGTTT	NA	False	NA	85	True	AATGAA	-19	NA	31375743	31484971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ES.28165.1	chr6	-	2018	4	NNC	ENSMUSG00000086212.8	novel	964	3	NA	NA	-3	912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGTAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	31375691	31342907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_31344528_31349168_31349328_31372632_31372730_31375549
ES.28165.2	chr6	-	5005	3	NNC	ENSMUSG00000086212.8	novel	1864	3	NA	NA	-666	1146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAGAATCTTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	31376374	31358825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_31363241_31372632_31372730_31375881
ES.28166.1	chr6	-	5503	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	-121	-3	-121	3	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCTAGTGTTTTGCTTT	NA	False	NA	4	True	AATAAA	-24	NA	31541037	31496419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.10	chr6	-	1845	8	NNC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	-2679	804	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.3019224922909	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTCCTCTGGCCGTC	NA	False	NA	-9	True	NA	NA	NA	31503925	31499122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_31500155_31500362_31500472_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31503886
ES.28166.11	chr6	-	2034	9	NIC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	118	168	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	19.9808502071358	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTCCCTCATGTAAAATA	NA	False	NA	NA	False	NA	NA	NA	31540798	31499758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_31500155_31500362_31500472_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.2	chr6	-	4410	7	NNC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	-2655	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_6	18.352262954621	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGGCCCTAGTGTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	31503901	31496424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31503886
ES.28166.3	chr6	-	5466	9	NIC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	19	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	19.9808502071358	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCAGGCCCTAGTGTTT	NA	False	NA	-2	True	AATAAA	-18	NA	31540897	31496425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_31500155_31500362_31500472_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.4	chr6	-	7523	6	NIC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	45	-5	intron_retention	FALSE	canonical	3	33	junction_1	9.30376267969041	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTCAGGCCCTAGTGT	NA	False	NA	-4	True	AATAAA	-16	NA	31540871	31496427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_31501408_31501604_31501667_31501873_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.5	chr6	-	5188	9	NNC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	117	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.8109897091159	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGTTCAGGCCCTAGT	NA	False	NA	-6	True	AATAAA	-14	NA	31540799	31496429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_31497284_31497350_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.6	chr6	-	5447	7	NIC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	120	-9	intron_retention	FALSE	canonical	3	40	junction_6	6.57436097443867	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGGTTCAGGCCCTA	NA	False	NA	-8	True	AATAAA	-12	NA	31540796	31496431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_31500155_31501239_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.7	chr6	-	4381	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	45	953	45	-953	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTTGTACTACTTTC	NA	False	NA	NA	False	AATACA	-15	NA	31540871	31497375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.8	chr6	-	2639	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	50	2690	50	814	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCGTCTGCTTCTGCT	NA	False	NA	1	True	NA	NA	NA	31540866	31499112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28166.9	chr6	-	2730	9	NIC	ENSMUSG00000025608.10	novel	5379	8	NA	NA	67	813	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	19.9808502071358	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCCGTCTGCTTCTGC	NA	False	NA	0	True	NA	NA	NA	31540849	31499113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_31500155_31500362_31500472_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ES.28167.1	chr6	-	177	1	Intergenic	novelGene_23422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGTATAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	31761529	31761352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_31761400_31761500
ES.28168.1	chr6	+	3762	6	NNC	ENSMUSG00000029766.8	novel	963	3	NA	NA	-111756	2754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGAGGCACTAGCAATTG	NA	False	NA	NA	False	NA	NA	NA	31915424	32038610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_31915546_31993871_31993991_31994621_31994746_31995523_31995650_32014809_32014889_32035417
ES.28169.1	chr6	-	4481	19	NNC	ENSMUSG00000029765.13	novel	12877	32	NA	NA	22318	-4841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.496903994999953	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTCCATTGTGTCT	NA	False	NA	NA	False	ACTAAA	-15	NA	32179816	32126043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32127520_32129735_32129887_32134766_32134980_32138944_32139115_32140334_32140526_32141994_32142095_32142692_32142797_32155285_32155446_32158722_32158870_32159622_32159690_32162228_32162498_32169181_32169325_32173058_32173294_32173957_32174105_32174598_32174839_32175205_32175300_32177744_32177910_32179023_32179161_32179544
ES.2817.1	chr10	-	168	1	Intergenic	novelGene_2145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTCTTTAATAGC	NA	False	NA	NA	False	NA	NA	NA	58331754	58331586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58331600_58331800
ES.28170.1	chr6	+	3217	1	Intergenic	novelGene_23423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATGCTCACAGCCAT	NA	False	NA	NA	False	NA	NA	NA	32791889	32795106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_32791900_32795100
ES.28171.1	chr6	+	3823	1	Intergenic	novelGene_23425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAACTCAGATCCGTGT	NA	False	NA	NA	False	NA	NA	NA	32931193	32935016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_32931200_32935000
ES.28172.1	chr6	+	2292	1	Intergenic	novelGene_23426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGAGGAATTTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	32936733	32939025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_32936700_32939000
ES.28173.1	chr6	+	4621	1	Intergenic	novelGene_23427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAAAAGATCAGGAGAGG	4813	False	NA	NA	False	NA	NA	NA	32973098	32977719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_32973100_32977700
ES.28173.2	chr6	+	3194	4	Antisense	novelGene_ENSMUSG00000106676.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAGCAAGGAGAAG	4815	False	NA	NA	False	NA	NA	NA	32973100	33037141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_32975917_32985416_32985500_33026271_33026360_33036934
ES.28173.3	chr6	+	4201	1	Intergenic	novelGene_23428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACACACACAGGCACCT	4815	False	NA	NA	False	NA	NA	NA	32973100	32977301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_32973100_32977300
ES.28174.1	chr6	-	1557	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	3	-10	3	10	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGCCTCATGTGTTC	NA	False	NA	0	True	AATAAA	-35	NA	33037192	32769141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.10	chr6	-	1109	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	16	425	-7	0	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTGTACTCTCTTTC	NA	False	NA	-10	True	AATAAA	-21	NA	33037179	32769576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.12	chr6	-	1071	8	NNC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	308.377716974704	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTTGTACTCTCTTT	NA	False	NA	-11	True	AATAAA	-20	NA	33037150	32769577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32769854_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.13	chr6	-	1198	9	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	380.746306613735	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCACCTTTTTGTACTC	NA	False	NA	-16	True	AATAAA	-15	NA	33037180	32769582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_32769862_32771149_32771244_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.14	chr6	-	1186	5	NIC	ENSMUSG00000053768.14	novel	1363	6	NA	NA	91	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	386.023639172525	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAGAATTATTAGTTTC	NA	False	NA	-14	True	AATAAA	-14	NA	33037061	32828379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_32829151_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.15	chr6	-	843	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	19	501	19	-501	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAAGTAGTAGATAGCA	NA	False	NA	NA	False	AATAAA	-20	NA	33037133	32828878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.16	chr6	-	1166	1	Intergenic	novelGene_23424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCTGAGCAGCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	32843909	32842743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_32842700_32843900
ES.28174.17	chr6	-	1384	8	NNC	ENSMUSG00000053768.14	novel	477	5	NA	NA	26	-15914	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	442.137479773439	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTTGTTATAGGTATA	NA	False	NA	NA	False	AATAAA	-24	NA	33037126	32844291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32844543_32846009_32846509_32846897_32846968_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.18	chr6	-	3573	1	Genic_Genomic	ENSMUSG00000053768.14	novel	NA	NA	NA	NA	-2182	-44238	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGTCAGGCTGGATGT	NA	False	NA	NA	False	NA	NA	NA	32876188	32872615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_32872600_32876200
ES.28174.19	chr6	-	1073	4	ISM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	31	116160	31	-116160	5prime_fragment	FALSE	canonical	3	870	junction_2	25.703436864876	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATATATTGGTAGATTA	NA	False	NA	NA	False	AATAAA	-13	NA	33037121	32944537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.20	chr6	-	2793	1	Intergenic	novelGene_23429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCAGGAATTAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	32979920	32977127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_32977100_32979900
ES.28174.21	chr6	-	2404	2	ISM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	-27	195823	-7	-195823	5prime_fragment	FALSE	canonical	3	887	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACCTAAGAGTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	33037179	33024200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_33026360_33036934
ES.28174.22	chr6	-	6841	1	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	6107	-195827	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATACCTAAGAGTGG	NA	False	NA	NA	False	NA	NA	NA	33031045	33024204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_33024200_33031000
ES.28174.23	chr6	-	1135	1	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	9	-207650	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACTTAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	33037162	33036027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_33036000_33037200
ES.28174.3	chr6	-	1191	5	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	25	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	376.612118100308	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCTGACTAAGACTG	NA	False	NA	-13	True	AATAAA	-22	NA	33037127	32769154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_33036934
ES.28174.4	chr6	-	1616	9	NNC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	374.814537471534	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGCATTTTCTGACT	NA	False	NA	-20	True	AATAAA	-15	NA	33037180	32769161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32975826_32975918_32985417_32985500_33026271_33026360_33036934
ES.28174.5	chr6	-	1560	9	NNC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	384.245364318166	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGCATTTTCTGACT	NA	False	NA	-20	True	AATAAA	-15	NA	33037134	32769161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32769862_32780824_32780961_32816478_32816560_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.6	chr6	-	2276	2	NNC	ENSMUSG00000053768.14	novel	470	3	NA	NA	3405	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGCATTTTCTGACT	NA	False	NA	-20	True	AATAAA	-15	NA	32777522	32769161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32770911_32776995
ES.28174.7	chr6	-	1539	8	NNC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	309.939822993998	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGCATTTTCTGACT	NA	False	NA	-20	True	AATAAA	-15	NA	33037185	32769161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945126_32945254_32985417_32985500_33026271_33026360_33036934
ES.28174.9	chr6	-	1392	7	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	330.764476461559	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTGGCATTTTCTGAC	NA	False	NA	-21	True	AATAAA	-14	NA	33037132	32769162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_32769862_32780824_32780961_32829079_32829151_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ES.28175.1	chr6	+	5143	18	NNC	ENSMUSG00000029763.18	novel	932	5	NA	NA	-1326	5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	33.4056539565232	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTTTTCTCATGTT	NA	False	NA	25	True	ATTAAA	-27	NA	33224693	33950919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33225162_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.11	chr6	+	6136	10	NIC	ENSMUSG00000029763.18	novel	2598	10	NA	NA	2	4275	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	43.8786204584116	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTATGACTCTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	33226068	33487035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33482338
ES.28175.12	chr6	+	2975	13	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	51	133921	0	21936	5prime_fragment	FALSE	canonical	3	107	junction_11	16.4991582276861	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	33226070	33816993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909
ES.28175.13	chr6	+	3737	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	51	1036	0	-1036	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCATAAAACTATTGCTA	NA	False	NA	NA	False	NA	NA	NA	33226070	33949878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.16	chr6	+	4050	14	NIC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	38.7643464566735	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	NA	False	NA	15	True	ATTAAA	-17	NA	33226074	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_33226174_33242874_33243065_33254121_33254317_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.17	chr6	+	4221	7	FSM	ENSMUSG00000029763.18	ENSMUST00000137043.8	4225	7	12	-8	4	8	multi-exon	FALSE	canonical	3	116	junction_4	14.5143607047182	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAGAGCAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	33226074	33327915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717
ES.28175.18	chr6	+	2877	2	ISM	ENSMUSG00000029763.18	ENSMUST00000139132.2	1060	6	4	50679	4	-50679	5prime_fragment	FALSE	canonical	3	145	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	33226074	33245652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33226174_33242874
ES.28175.2	chr6	+	4786	18	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	-34	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.8798233384942	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	NA	False	NA	15	True	ATTAAA	-17	NA	33225985	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33226107_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.20	chr6	+	4260	18	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	4	-505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.5585106368814	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAGGTCTAAAGCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	33226074	33950409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309149_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.22	chr6	+	4702	1	NIC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	12522	-53037	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33238592	33243294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_33238600_33243300
ES.28175.23	chr6	+	6157	1	NIC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	13425	-50679	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	33239495	33245652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_33239500_33245700
ES.28175.25	chr6	+	4019	11	ISM	ENSMUSG00000029763.18	ENSMUST00000132842.8	3686	13	28185	-760	28177	760	3prime_fragment	FALSE	canonical	1	2	junction_10	41.7757106462595	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACATATGTCTAATTA	5115	False	NA	NA	False	AATAAA	-26	NA	33254247	33795817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33793270
ES.28175.26	chr6	+	3111	1	Genic_Genomic	ENSMUSG00000029763.18	novel	NA	NA	NA	NA	-13188	2881	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGATAAAAAAGAAAA	6438	False	NA	NA	False	AAGAAA	-30	NA	33296101	33299212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_33296100_33299200
ES.28175.27	chr6	+	2378	1	Intergenic	novelGene_23434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33500511	33502889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_33500500_33502900
ES.28175.28	chr6	+	3394	9	NNC	ENSMUSG00000029763.18	novel	384	2	NA	NA	-105711	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.7919263869313	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCGTATGTTGTTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	33572657	33950911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33572816_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.29	chr6	+	1409	1	Intergenic	novelGene_23435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATAAATGCACAGACA	NA	False	NA	NA	False	TATAAA	-30	NA	33592574	33593983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_33592600_33594000
ES.28175.3	chr6	+	4852	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	-23	-5	-23	5	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTTTTCTCATGTT	NA	False	NA	25	True	ATTAAA	-27	NA	33225996	33950919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.30	chr6	+	11413	1	Intergenic	novelGene_23436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATTTGAAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	33597398	33608811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_33597400_33608800
ES.28175.31	chr6	+	1999	5	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	56702	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.8375959043942	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	NA	False	NA	15	True	ATTAAA	-17	NA	33735070	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33949433
ES.28175.32	chr6	+	5571	2	Intergenic	novelGene_23438	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAGCAGAAGGTAC	NA	False	NA	NA	False	NA	NA	NA	33750740	33756353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_33752283_33752324
ES.28175.33	chr6	+	3017	7	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	566586	5	-46429	-5	3prime_fragment	FALSE	canonical	3	119	junction_5	9.72967967955095	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	NA	False	NA	15	True	ATTAAA	-17	NA	33792605	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.34	chr6	+	2659	5	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	39432	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.7016268315768	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCGTATGTTGTTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	33878466	33950911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33878574_33887414_33887565_33895335_33895515_33898312_33898473_33948848
ES.28175.35	chr6	+	4295	4	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	49723	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.4262476336799	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATCGTATGTTGTTTT	NA	False	NA	16	True	ATTAAA	-18	NA	33888757	33950910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33890652_33895335_33895515_33898312_33898473_33948848
ES.28175.36	chr6	+	2225	2	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	672291	3	59276	-3	3prime_fragment	FALSE	canonical	3	146	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCGTATGTTGTTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	33898310	33950911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33898473_33948848
ES.28175.37	chr6	+	2063	1	NIC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	109812	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	7545	False	NA	15	True	ATTAAA	-17	NA	33948846	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_33948800_33950900
ES.28175.38	chr6	+	1986	2	NNC	ENSMUSG00000029763.18	novel	4824	18	NA	NA	109843	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCGTATGTTGTTT	7576	False	NA	15	True	ATTAAA	-17	NA	33948877	33950909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_33949382_33949427
ES.28175.4	chr6	+	2760	14	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	14	111243	14	576	5prime_fragment	FALSE	canonical	3	107	junction_11	16.0457924585014	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTGCGAGCTGAGAAA	NA	False	NA	NA	False	NA	NA	NA	33226033	33839671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995
ES.28175.5	chr6	+	8025	12	ISM	ENSMUSG00000029763.18	ENSMUST00000132842.8	3686	13	-21	-3793	-21	3793	intron_retention	FALSE	canonical	3	107	junction_11	16.980299717979	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	33226041	33798850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608
ES.28175.7	chr6	+	558	2	ISM	ENSMUSG00000029763.18	ENSMUST00000139132.2	1060	6	-6	53008	2	-53008	5prime_fragment	FALSE	canonical	3	145	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	33226064	33243323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_33226174_33242874
ES.28176.1	chr6	-	793	1	Intergenic	novelGene_23430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33253096	33252303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33252300_33253100
ES.28177.1	chr6	-	3643	1	Intergenic	novelGene_23431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCATGTCTCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	33336940	33333297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33333300_33336900
ES.28178.1	chr6	-	4245	1	Intergenic	novelGene_23432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	33360612	33356367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33356400_33360600
ES.28179.1	chr6	-	2464	1	Intergenic	novelGene_23433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGGAGGAGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	33429598	33427134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33427100_33429600
ES.2818.1	chr10	+	1571	4	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-67	-890	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	29.5108266385218	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	876	False	NA	NA	False	NA	NA	NA	58333702	58337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58336018
ES.2818.10	chr10	+	3548	1	Genic_Genomic	ENSMUSG00000038010.10	novel	NA	NA	NA	NA	-9	-886	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	934	False	NA	NA	False	NA	NA	NA	58333760	58337308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_58333800_58337300
ES.2818.11	chr10	+	2290	3	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-9	74762	-9	-890	5prime_fragment	FALSE	canonical	3	60	junction_1	5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	934	False	NA	NA	False	NA	NA	NA	58333760	58337304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58333885_58334990_58335036_58335183
ES.2818.12	chr10	+	2167	12	NNC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	2	-34596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.3045855249353	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATCTTCACCTATTT	945	False	NA	NA	False	NA	NA	NA	58333771	58377470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345281_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
ES.2818.13	chr10	+	2123	14	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	21.560702802215	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	952	False	NA	NA	False	AATAAA	-22	NA	58333778	58412064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58397722_58397900_58409410_58409550_58411510
ES.2818.15	chr10	+	2695	15	NIC	ENSMUSG00000038010.10	novel	2750	4	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	19.6657010024654	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGTCCCTTCTTTTGA	1191	False	NA	NA	False	AATAAA	-27	NA	58334017	58412069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58334498_58334990_58335036_58335183_58335242_58343342_58343464_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ES.2818.16	chr10	+	2009	11	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	1219	34598	962	-34598	internal_fragment	FALSE	canonical	3	46	junction_8	7.03491293478462	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGATCTTCACCTAT	2162	False	NA	NA	False	NA	NA	NA	58334988	58377468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
ES.2818.17	chr10	+	4305	1	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	9880	10017	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATTTGTCATCATGAGA	NA	False	NA	NA	False	NA	NA	NA	58343906	58348211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58343900_58348200
ES.2818.18	chr10	+	1383	6	NNC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	33395	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.1985293720083	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	7539	False	NA	NA	False	AATAAA	-22	NA	58367421	58412064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58367656_58374070_58374233_58376619_58376737_58397722_58397900_58409410_58409550_58411510
ES.2818.19	chr10	+	1576	7	NNC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	33395	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8246648632497	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	7539	False	NA	NA	False	AATAAA	-22	NA	58367421	58412064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58367656_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ES.2818.2	chr10	+	2505	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-52	2	-52	-2	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	891	False	NA	NA	False	AATAAA	-22	NA	58333717	58412064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ES.2818.20	chr10	+	2223	4	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	45792	19	45535	-19	3prime_fragment	FALSE	canonical	3	47	junction_1	2.62466929133727	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCATTTTTCCCTTAAT	4406	False	NA	NA	False	AATAAA	-5	NA	58379561	58412047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58380932_58397722_58397900_58409410_58409550_58411510
ES.2818.21	chr10	+	6383	4	NNC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	57966	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8932812499432	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	508	False	NA	NA	False	AATAAA	-22	NA	58391992	58412064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58394406_58394622_58397900_58409410_58409550_58411510
ES.2818.22	chr10	+	336	1	Intergenic	novelGene_2148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGACGAAATCTTTT	25	False	NA	NA	False	NA	NA	NA	58394413	58394749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58394400_58394700
ES.2818.23	chr10	+	187	1	Intergenic	novelGene_2149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	31	False	NA	NA	False	NA	NA	NA	58394419	58394606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58394400_58394600
ES.2818.24	chr10	+	176	1	Intergenic	novelGene_2150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATATAAATACTA	2556	False	NA	NA	False	NA	NA	NA	58396944	58397120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58396900_58397100
ES.2818.3	chr10	+	2436	4	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-44	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	29.5108266385218	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGGTTGTCTTTGGTCAC	899	False	NA	NA	False	NA	NA	NA	58333725	58338192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58336018
ES.2818.4	chr10	+	2172	12	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-32	34580	-32	-34580	5prime_fragment	FALSE	canonical	3	46	junction_9	6.71497647731614	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGTATTTAAGTGATA	911	False	NA	NA	False	NA	NA	NA	58333737	58377486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619
ES.2818.5	chr10	+	4995	5	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-27	13344	intron_retention	FALSE	canonical	3	57	junction_4	5.06828373317832	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	916	False	NA	NA	False	NA	NA	NA	58333742	58351538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58345455_58348900
ES.2818.6	chr10	+	2186	14	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-22	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	22.1354089946616	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATATAGTAGAGTCCCTT	921	False	NA	NA	False	AATAAA	-20	NA	58333747	58412062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58348900_58349080_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ES.2818.7	chr10	+	4186	6	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	-22	59469	-22	14403	5prime_fragment	FALSE	canonical	3	53	junction_4	6.11228271597445	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAACACAGAAGAAG	921	False	NA	NA	False	NA	NA	NA	58333747	58352597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900
ES.2818.8	chr10	+	2016	11	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-10	-34636	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	18.9855207987561	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAATACTAATA	933	False	NA	NA	False	NA	NA	NA	58333759	58377430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364726_58364835_58374070_58374233_58376619
ES.2818.9	chr10	+	4940	15	NIC	ENSMUSG00000038010.10	novel	2455	16	NA	NA	-9	0	intron_retention	FALSE	canonical	3	12	junction_1	15.0874998943239	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	934	False	NA	NA	False	AATAAA	-24	NA	58333760	58412066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58334498_58334990_58335036_58335183_58335242_58343342_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ES.28180.1	chr6	-	3837	2	Antisense	novelGene_ENSMUSG00000029763.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAATACAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	33472845	33464212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_33467353_33472148
ES.28181.1	chr6	-	3964	1	Antisense	novelGene_ENSMUSG00000029763.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTGACTGAAAGACACA	NA	False	NA	NA	False	CATAAA	-45	NA	33560490	33556526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_33556500_33560500
ES.28182.1	chr6	-	2846	1	Intergenic	novelGene_23437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTTCTCCCATTCTTT	NA	False	NA	NA	False	NA	NA	NA	33625452	33622606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33622600_33625500
ES.28183.1	chr6	-	3907	1	Intergenic	novelGene_23439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAATAATAAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	33823389	33819482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_33819500_33823400
ES.28184.1	chr6	+	3479	20	FSM	ENSMUSG00000056215.14	ENSMUST00000070189.10	3058	20	-1	-420	-1	420	multi-exon	TRUE	canonical	1	1	junction_5	1.53806728381078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCCCACTTGGACAA	NA	False	NA	NA	False	ATTAAA	-15	NA	34006381	34111389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34006689_34013435_34013544_34016242_34016325_34020339_34020441_34025793_34025876_34033005_34033131_34039285_34039430_34047995_34048077_34049304_34049392_34050650_34050758_34055598_34055719_34063310_34063408_34067106_34067221_34069671_34069874_34072458_34072555_34093323_34093455_34104111_34104201_34106039_34106166_34108899_34109046_34110255
ES.28184.2	chr6	+	5582	16	FSM	ENSMUSG00000056215.14	ENSMUST00000228187.2	10475	16	12	4881	10	-4881	multi-exon	FALSE	canonical	0	0	junction_15	1.70749979664876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGGAGCACTTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	34006394	34082351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34006689_34013435_34013544_34016242_34016325_34020339_34020441_34025793_34025876_34033005_34033131_34039285_34039430_34047995_34048077_34049304_34049392_34050650_34050758_34055598_34055719_34063310_34063408_34067106_34067221_34069671_34069874_34072458_34072555_34078609
ES.28184.4	chr6	+	212	1	Intergenic	novelGene_23441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGCTTGTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	34050899	34051111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34050900_34051100
ES.28184.5	chr6	+	5346	1	Genic_Genomic	ENSMUSG00000056215.14	novel	NA	NA	NA	NA	65645	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTTAATTTGTCATG	NA	False	NA	NA	False	AATAAA	-25	NA	34081887	34087233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_34081900_34087200
ES.28184.6	chr6	+	329	1	Intergenic	novelGene_23442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGAAGGGCTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	34087809	34088138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34087800_34088100
ES.28185.1	chr6	-	168	1	Intergenic	novelGene_23440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	34028983	34028815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_34028800_34029000
ES.28186.1	chr6	+	174	1	Intergenic	novelGene_23443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	34118558	34118732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34118600_34118700
ES.28187.1	chr6	-	6220	1	Genic_Genomic	ENSMUSG00000018999.15	novel	NA	NA	NA	NA	7107	3224	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTTGGGCATGAT	NA	False	NA	NA	False	NA	NA	NA	34133310	34127090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_34127100_34133300
ES.28187.10	chr6	-	3760	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	1	2492	1	851	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	-21	True	TATAAA	-22	NA	34154045	34132806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.11	chr6	-	3656	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	22	847	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	73.4536418430019	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	-25	True	TATAAA	-18	NA	34153995	34132810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
ES.28187.12	chr6	-	3718	11	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-14	847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.1672585650137	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	-25	True	TATAAA	-18	NA	34153919	34132810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147029_34147118_34147395_34147510_34153712
ES.28187.13	chr6	-	5787	5	FSM	ENSMUSG00000018999.15	ENSMUST00000146514.8	2320	5	-2620	-847	-2620	847	multi-exon	FALSE	canonical	3	204	junction_2	12.49749974995	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	NA	False	NA	-25	True	TATAAA	-18	NA	34143037	34132810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263
ES.28187.14	chr6	-	3574	10	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-14443	845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.8274769930138	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGTTTGTTTGTTTGT	8570	False	NA	-27	True	TATAAA	-16	NA	34168489	34132812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34168336
ES.28187.15	chr6	-	7383	2	NIC	ENSMUSG00000018999.15	novel	2320	5	NA	NA	-756	831	intron_retention	FALSE	canonical	3	204	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTCTCTTTGCCATTT	NA	False	NA	-41	True	TATAAA	-2	NA	34141173	34132826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34136444_34137407
ES.28187.16	chr6	-	3598	10	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	23	827	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	68.9557023667288	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCATTTCTCTTTGCC	NA	False	NA	-45	True	CATAAA	-13	NA	34153882	34132830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135587_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.17	chr6	-	3345	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	115	2793	-26	550	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATTGTGTATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	34153931	34133107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.18	chr6	-	3061	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	54	3138	25	205	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTCCCTCGGGGC	NA	False	NA	2	True	AATAAA	-28	NA	34153992	34133452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.19	chr6	-	2896	10	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-34	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.5057567039392	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAGAAGAATCTGTCCC	NA	False	NA	-5	True	AATAAA	-21	NA	34153939	34133459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135457_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.2	chr6	-	6148	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	103	2	-38	-2	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTGTCCAATCACCAT	NA	False	NA	NA	False	AATAAA	-16	NA	34153943	34130316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.20	chr6	-	2822	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	65	3366	36	-23	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGCAGACTGATTGTC	NA	False	NA	NA	False	ATTAAA	-31	NA	34153981	34133680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.21	chr6	-	2688	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	3	-28	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	73.4536418430019	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGGTTTGCAGACTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	34153902	34133685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
ES.28187.22	chr6	-	5660	8	NIC	ENSMUSG00000018999.15	novel	4110	9	NA	NA	-22	-33	intron_retention	FALSE	canonical	3	204	junction_2	11.2485826771597	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCCCCAGGTTTGCAG	NA	False	NA	NA	False	ATTAAA	-21	NA	34153927	34133690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.23	chr6	-	5436	9	FSM	ENSMUSG00000018999.15	ENSMUST00000145857.8	4110	9	1	-1327	1	-35	multi-exon	FALSE	canonical	3	204	junction_2	12.0201653482804	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAAGTCCCCAGGTTTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	34153904	34133692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.24	chr6	-	2418	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	103	3732	-38	-389	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCGTCCCCACTTAGG	NA	False	NA	NA	False	NA	NA	NA	34153943	34134046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.25	chr6	-	2263	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	127	3863	-14	-520	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTGAAGGTCTGATTGT	NA	False	NA	NA	False	NA	NA	NA	34153919	34134177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.26	chr6	-	1556	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	0	4697	0	8	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCAGAGCTTCTAGTT	NA	False	NA	30	True	NA	NA	NA	34154046	34135011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.27	chr6	-	2480	8	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-30	-34	intron_retention	FALSE	canonical	1	2	junction_5	78.3935649170783	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTGCCAGAACATC	NA	False	NA	-12	True	NA	NA	NA	34153935	34135053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
ES.28187.28	chr6	-	574	3	ISM	ENSMUSG00000018999.15	ENSMUST00000145857.8	4110	9	-15	9391	-15	-6958	5prime_fragment	FALSE	canonical	3	218	junction_1	7	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGTGGGAATTTT	NA	False	NA	NA	False	AATGAA	-4	NA	34153920	34144410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34144663_34147395_34147510_34153712
ES.28187.3	chr6	-	5966	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	16	-80	combination_of_known_splicesites	TRUE	canonical	1	2	junction_6	73.4536418430019	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAACTCATAAGACA	NA	False	NA	NA	False	NA	NA	NA	34153889	34130394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
ES.28187.4	chr6	-	3861	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	31	2361	2	982	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATATCGTTTGTCTCAA	NA	False	NA	1	True	ATTAAA	-19	NA	34154015	34132675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ES.28187.5	chr6	-	3662	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	38	981	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	73.4536418430019	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATATCGTTTGTCTCA	NA	False	NA	0	True	ATTAAA	-18	NA	34153867	34132676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
ES.28187.6	chr6	-	4956	9	NIC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-5	981	intron_retention	FALSE	canonical	3	204	junction_2	12.1237112717187	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATATCGTTTGTCTCA	NA	False	NA	0	True	ATTAAA	-18	NA	34153910	34132676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34144663_34147395_34147510_34153712
ES.28187.7	chr6	-	3696	10	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	-13956	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.8274769930138	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCATATCGTTTGT	9057	False	NA	-4	True	ATTAAA	-14	NA	34168002	34132680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34167859
ES.28187.8	chr6	-	5101	6	ISM	ENSMUSG00000018999.15	ENSMUST00000145857.8	4110	9	11484	-2338	-2004	976	3prime_fragment	FALSE	canonical	3	204	junction_2	14.1647449677006	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGAGCATATCGTTTG	NA	False	NA	-5	True	ATTAAA	-13	NA	34142421	34132681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523
ES.28187.9	chr6	-	3358	9	NNC	ENSMUSG00000018999.15	novel	6253	10	NA	NA	6459	851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.6867313361096	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	-21	True	TATAAA	-22	NA	34147446	34132806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140600_34143308_34143359_34144559_34144663_34147395
ES.28188.1	chr6	-	1402	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	-12	-3	-12	3	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGGTCCGTTTTGTTC	NA	False	NA	-2	True	AATAAA	-19	NA	34294425	34280865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ES.28188.10	chr6	-	1282	10	NNC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	342.937996051476	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTGGTGGTGGTCCG	NA	False	NA	-10	True	AATAAA	-11	NA	34294377	34280873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289691_34294286
ES.28188.2	chr6	-	5919	8	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	629	junction_2	218.190424227302	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	34294389	34280868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ES.28188.3	chr6	-	3551	9	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	629	junction_3	211.675459134969	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	34294377	34280868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ES.28188.4	chr6	-	3739	9	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	629	junction_3	204.564170860882	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTGGTGGTCCGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	34294411	34280870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34281275_34283474_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ES.28188.5	chr6	-	5917	9	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	0	2	0	-2	intron_retention	FALSE	canonical	3	629	junction_4	202.05502808641	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTGGTGGTCCGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	34294413	34280870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574
ES.28188.6	chr6	-	4250	8	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	4	-2	intron_retention	FALSE	canonical	3	629	junction_2	218.677005313913	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTGGTGGTCCGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	34294409	34280870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34281275_34283474_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ES.28188.8	chr6	-	5974	6	NIC	ENSMUSG00000001642.19	novel	1387	10	NA	NA	4738	-4	intron_retention	FALSE	canonical	3	629	junction_2	224.423171709162	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGGTGGTGGTCCGT	282	False	NA	-9	True	AATAAA	-12	NA	34289627	34280872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34285998_34286510_34286593_34286895_34287003_34287447_34287938_34288856_34288974_34289574
ES.28189.1	chr6	+	1355	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	-6	9	-6	-9	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACACGTTCTGAAGTG	NA	False	NA	NA	False	AATAAA	-23	NA	34331047	34345389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ES.2819.1	chr10	-	643	1	Intergenic	novelGene_2146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58366859	58366216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58366200_58366900
ES.28190.1	chr6	-	202	1	Intergenic	novelGene_23444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGCTGAGGTTTTCTC	3630	False	NA	NA	False	NA	NA	NA	34341457	34341255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_34341300_34341500
ES.28191.1	chr6	+	1356	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	21	-6	-10	6	multi-exon	TRUE	canonical	3	14	junction_8	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGTCAGAATACTTTT	3027	False	NA	10	True	AATAAA	-24	NA	34361173	34373891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
ES.28192.1	chr6	+	1644	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	97	479	-52	-479	multi-exon	FALSE	canonical	3	82	junction_2	7.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCCTCGAGTGTGTGA	NA	False	NA	22	True	AATAAA	-27	NA	34453238	34482069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34453358_34464224_34464886_34481205
ES.28192.2	chr6	+	1390	3	NNC	ENSMUSG00000038871.6	novel	2220	3	NA	NA	-43	-479	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	39	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCCTCGAGTGTGTGA	NA	False	NA	22	True	AATAAA	-27	NA	34453247	34482069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34453358_34464469_34464886_34481205
ES.28192.3	chr6	+	966	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	108	1146	-41	-1146	multi-exon	FALSE	canonical	3	82	junction_2	7.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTGGCATGCAGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	34453249	34481402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34453358_34464224_34464886_34481205
ES.28193.1	chr6	+	4060	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	-23	4	-23	1	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1234	False	NA	28	True	AATAAA	-16	NA	34686353	34752404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.10	chr6	+	4699	13	NNC	ENSMUSG00000029761.17	novel	2142	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.2906736612399	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	1303	False	NA	25	True	AATAAA	-43	NA	34686422	34752401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34723575_34724820_34724905_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750154
ES.28193.11	chr6	+	3692	12	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.291768820687	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTCTGTCTCGTGCAT	1303	False	NA	26	True	AATAAA	-44	NA	34686422	34752402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730462_34732803_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.12	chr6	+	894	4	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	-2	4706	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	100.677703589226	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTGAATGTGGTGG	1303	False	NA	NA	False	ATTAAA	-22	NA	34686422	34723849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34723709
ES.28193.13	chr6	+	3883	12	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.9593308363313	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	1303	False	NA	25	True	AATAAA	-43	NA	34686422	34752401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722905_34730436_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.15	chr6	+	3613	11	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.1991092589465	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	1316	False	NA	25	True	AATAAA	-43	NA	34686435	34752401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732712_34735020_34735060_34739044_34739089_34739185_34739265_34743037_34743134_34747982_34748064_34750157
ES.28193.16	chr6	+	3781	12	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.0045319591324	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTCTGTCTCGTGCAT	1433	False	NA	26	True	AATAAA	-44	NA	34686552	34752402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732791_34734953_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.17	chr6	+	1816	3	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	-2	26473	-2	5013	5prime_fragment	FALSE	canonical	3	208	junction_2	9	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTTAAAAGCCTGACTT	1447	False	NA	NA	False	NA	NA	NA	34686566	34724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_34686633_34718723_34718871_34722553
ES.28193.18	chr6	+	4536	10	NNC	ENSMUSG00000029761.17	novel	674	2	NA	NA	4030	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.6468291148895	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	NA	False	NA	28	True	AATAAA	-16	NA	34728737	34752404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34730037_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.2	chr6	+	4127	13	NIC	ENSMUSG00000029761.17	novel	4096	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	77.3083203082882	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTGTCTCGTGCATT	1250	False	NA	27	True	AATAAA	-45	NA	34686369	34752403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_34686633_34718723_34718871_34722553_34722951_34724820_34724905_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ES.28193.4	chr6	+	4049	12	NNC	ENSMUSG00000029761.17	novel	4041	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	62.4563318521809	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTGTCTCGTGCATT	1261	False	NA	27	True	AATAAA	-45	NA	34686380	34752403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750140
ES.28193.7	chr6	+	2584	11	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	21	3530	21	-1751	5prime_fragment	FALSE	canonical	3	149	junction_3	29.4260089036893	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTACGCTGATACTCA	1278	False	NA	NA	False	NA	NA	NA	34686397	34748878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982
ES.28193.8	chr6	+	6093	11	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	38	4	-10	1	intron_retention	FALSE	canonical	3	149	junction_3	29.4260089036893	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTCTCGTGCATTC	1295	False	NA	28	True	AATAAA	-16	NA	34686414	34752404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982
ES.28193.9	chr6	+	1652	3	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	-147	26782	-3	4704	5prime_fragment	FALSE	canonical	3	208	junction_2	9	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGATGCTGAATGTGGT	1302	False	NA	NA	False	ATTAAA	-20	NA	34686421	34723847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_34686633_34718723_34718871_34722553
ES.28194.1	chr6	-	2200	2	Antisense	novelGene_ENSMUSG00000029761.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAATTGATGTTGATC	NA	False	NA	NA	False	AATAAA	-17	NA	34696087	34691966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_34693861_34695781
ES.28195.1	chr6	+	2931	3	ISM	ENSMUSG00000038836.16	ENSMUST00000135304.8	3384	7	-7	17513	3	557	5prime_fragment	FALSE	canonical	3	5	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAAAGCAATCTGT	1662	False	NA	NA	False	AATAAA	-15	NA	34757369	34763211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_34759154_34760504_34760566_34762125
ES.28195.2	chr6	+	1885	4	FSM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	-443	-637	4	562	multi-exon	FALSE	canonical	2	5	junction_3	0.816496580927726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCAATCTGTACTTA	1673	False	NA	NA	False	AATAAA	-20	NA	34757380	34763216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34757995_34759034_34759154_34760504_34760566_34762125
ES.28195.3	chr6	+	2122	3	NIC	ENSMUSG00000038836.16	novel	806	4	NA	NA	4	-129	intron_retention	FALSE	canonical	1	1	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTTTAAAAGTGGA	1673	False	NA	NA	False	NA	NA	NA	34757380	34762450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_34759154_34760504_34760529_34762125
ES.28195.4	chr6	+	177	1	Intergenic	novelGene_23445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAATC	5999	False	NA	NA	False	NA	NA	NA	34761706	34761883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34761700_34761900
ES.28196.1	chr6	+	3141	2	NIC	ENSMUSG00000057137.10	novel	345	2	NA	NA	49	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTTTTCTAAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	34844035	34848505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_34844121_34845449
ES.28197.1	chr6	+	2986	1	Intergenic	novelGene_23446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCCCTACATCTCCTT	3941	False	NA	NA	False	NA	NA	NA	34877339	34880325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34877300_34880300
ES.28198.1	chr6	-	7152	2	FSM	ENSMUSG00000046806.14	ENSMUST00000140458.2	709	2	-338	-6105	-189	2530	multi-exon	FALSE	canonical	3	23	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACAAACAAC	8339	False	NA	NA	False	AATACA	-20	NA	34854253	34846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34852548_34853473
ES.28198.10	chr6	-	3226	8	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	18051	-1363	17738	1363	3prime_fragment	FALSE	canonical	3	62	junction_6	12.1184628916849	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGGCAAGTCTCCTAG	8282	False	NA	-5	True	AATAAA	-43	NA	34869760	34855997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275
ES.28198.11	chr6	-	1679	12	NNC	ENSMUSG00000058486.12	novel	711	6	NA	NA	-2	604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7568892212971	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTGTAGACTTAAGT	5814	False	NA	NA	False	NA	NA	NA	34887773	34856756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34856782_34866180_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
ES.28198.12	chr6	-	7017	13	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	20	0	intron_retention	FALSE	canonical	1	3	junction_5	22.4058214161707	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5839	False	NA	-1	True	NA	NA	NA	34887748	34857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866008_34866171_34866267_34868321_34868473_34869275_34873275_34881451_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.13	chr6	-	4982	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.2826234120323	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5815	False	NA	-1	True	NA	NA	NA	34887772	34857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34870776_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.14	chr6	-	7106	13	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-10	0	intron_retention	FALSE	canonical	2	55	junction_10	11.9962378361811	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5800	False	NA	-1	True	NA	NA	NA	34887787	34857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34873275_34881451_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.15	chr6	-	4932	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.2334016102525	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5815	False	NA	-1	True	NA	NA	NA	34887772	34857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866008_34866171_34866267_34868321_34868473_34869275_34869470_34870776_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.16	chr6	-	6284	14	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	1	0	intron_retention	FALSE	canonical	2	55	junction_11	11.5292270739663	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5820	False	NA	-1	True	NA	NA	NA	34887767	34857360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.17	chr6	-	2643	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	38	1	-2	-1	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	5814	False	NA	-2	True	NA	NA	NA	34887773	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.18	chr6	-	2757	16	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	24.5335144920848	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	5814	False	NA	-2	True	NA	NA	NA	34887773	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886648_34886763_34887631
ES.28198.19	chr6	-	4440	15	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	8	junction_13	24.2541812090709	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	5815	False	NA	-2	True	NA	NA	NA	34887772	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34857904_34861118_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886648_34886763_34887631
ES.28198.2	chr6	-	6255	5	NNC	ENSMUSG00000046806.14	novel	3681	4	NA	NA	-2	2530	intron_retention	FALSE	canonical	0	0	junction_4	9.44391338376205	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAAAACAAACAAC	7634	False	NA	NA	False	AATACA	-20	NA	34854958	34846175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34851631_34852286_34852329_34852471_34852548_34853473_34853707_34854509
ES.28198.20	chr6	-	4979	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	28.4991944032222	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	5815	False	NA	-2	True	NA	NA	NA	34887772	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34870776_34873275_34881451_34881618_34882419_34882554_34883575_34883665_34885056_34885257_34886295_34886476_34887631
ES.28198.21	chr6	-	5149	16	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.5316026580942	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	5761	False	NA	-2	True	NA	NA	NA	34887826	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34870776_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886648_34886763_34887631
ES.28198.22	chr6	-	2698	16	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	27.5991948352765	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	6097	False	NA	-2	True	NA	NA	NA	34887490	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886615_34886763_34887440
ES.28198.23	chr6	-	3820	9	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	12447	1	12134	-1	3prime_fragment	FALSE	canonical	3	62	junction_6	12.2448968962585	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCTTTCTGGA	2678	False	NA	-2	True	NA	NA	NA	34875364	34857361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115
ES.28198.24	chr6	-	2792	16	NIC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	24.5335144920848	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGTGTCTCTTTCTGG	5815	False	NA	-3	True	NA	NA	NA	34887772	34857362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
ES.28198.25	chr6	-	2639	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	21.978653837071	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGTGTCTCTTTCTGG	5815	False	NA	-3	True	NA	NA	NA	34887772	34857362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883665_34885056_34885257_34886295_34886476_34887631
ES.28198.26	chr6	-	2596	15	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	35	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	22.3173996363961	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGGTGTCTCTTTCTG	6124	False	NA	-4	True	NA	NA	NA	34887463	34857363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887366
ES.28198.28	chr6	-	4275	14	NNC	ENSMUSG00000058486.12	novel	2682	15	NA	NA	-2	-3	intron_retention	FALSE	canonical	1	3	junction_4	20.3809866146027	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGGTGTCTCTTTCTG	5814	False	NA	-4	True	NA	NA	NA	34887773	34857363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34857904_34861118_34863114_34863742_34863852_34865888_34866008_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.29	chr6	-	3782	14	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	39	17	-1	-17	intron_retention	FALSE	canonical	2	55	junction_12	11.881067431574	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTCTTACAGTCACTT	5815	False	NA	-18	True	NA	NA	NA	34887772	34857377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295
ES.28198.3	chr6	-	4378	1	NIC	ENSMUSG00000046806.14	novel	3326	4	NA	NA	1	13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTCAATCCTGTTCACC	7598	False	NA	-7	True	NA	NA	NA	34854994	34850616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34850600_34855000
ES.28198.30	chr6	-	3864	11	NIC	ENSMUSG00000058486.12	novel	2569	14	NA	NA	0	-7881	intron_retention	FALSE	canonical	3	8	junction_9	26.8335610756381	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAATTAGAATTGCAG	5819	False	NA	NA	False	AATAAA	-38	NA	34887768	34865241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34885257_34886295_34886476_34886611_34886763_34887631
ES.28198.32	chr6	-	4435	7	ISM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	24	12406	-10	11835	5prime_fragment	FALSE	canonical	2	55	junction_4	9.69106117340442	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCCGTGGTGTTTCA	5800	False	NA	-2	True	NA	NA	NA	34887787	34869766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28198.33	chr6	-	4584	8	NIC	ENSMUSG00000058486.12	novel	2569	14	NA	NA	-12	11831	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	29.1715544981191	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTTTGGCCGTGGTGT	5798	False	NA	-6	True	NA	NA	NA	34887789	34869770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34886611_34886763_34887631
ES.28198.34	chr6	-	4483	7	NNC	ENSMUSG00000058486.12	novel	2569	14	NA	NA	44	11830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.318133177642	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCTTTGGCCGTGGTG	6133	False	NA	-7	True	NA	NA	NA	34887454	34869771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887245
ES.28198.35	chr6	-	1099	2	NNC	ENSMUSG00000058486.12	novel	385	3	NA	NA	15	59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAGAAAAAGGT	6005	False	NA	NA	False	NA	NA	NA	34887582	34885422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_34886476_34887536
ES.28198.4	chr6	-	2307	3	NIC	ENSMUSG00000046806.14	novel	1501	4	NA	NA	15	10	intron_retention	FALSE	canonical	3	18	junction_2	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTATTCAATCCTGTTC	7612	False	NA	-10	True	NA	NA	NA	34854980	34850619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34852548_34853473_34853707_34854834
ES.28198.5	chr6	-	3441	2	FSM	ENSMUSG00000046806.14	ENSMUST00000140458.2	709	2	-1071	-1661	9	10	multi-exon	FALSE	canonical	3	23	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTATTCAATCCTGTTC	7606	False	NA	-10	True	NA	NA	NA	34854986	34850619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34852548_34853473
ES.28198.6	chr6	-	1555	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115006.2	1501	4	-55	1	-4	-1	multi-exon	FALSE	canonical	1	2	junction_1	8.9566858950296	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTTGTGACGACTATT	7593	False	NA	-21	True	NA	NA	NA	34854999	34850630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34851631_34852390_34852548_34853473_34853707_34854834
ES.28198.7	chr6	-	3450	14	Fusion	ENSMUSG00000058486.12_ENSMUSG00000046806.14	novel	2682	15	NA	NA	6008	-9	multi-exon	FALSE	canonical	0	0	junction_1	34.448314770574	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTGTGTTTGTGA	NA	False	NA	-29	True	AATAAA	-42	NA	34881490	34850638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_34851631_34852155_34852329_34852471_34852548_34853473_34853707_34857154_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451
ES.28198.8	chr6	-	2542	2	FSM	ENSMUSG00000046806.14	ENSMUST00000140458.2	709	2	-842	-991	187	291	multi-exon	FALSE	canonical	3	23	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCAGTCCCAGGAGGT	7835	False	NA	NA	False	NA	NA	NA	34854757	34851289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34852548_34853473
ES.28198.9	chr6	-	5531	15	FSM	ENSMUSG00000058486.12_ENSMUSG00000046806.14	ENSMUST00000081214.12	2682	15	-10	-2839	-10	-2241	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTACTGGTGTATGTTG	5766	False	NA	4	True	TATAAA	-24	NA	34887821	34854521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ES.28199.1	chr6	+	177	1	Intergenic	novelGene_23447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34893109	34893286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34893100_34893300
ES.282.1	chr1	+	208	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAGCCCCCCAAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	36580183	36580391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36580200_36580400
ES.2820.1	chr10	-	2788	1	Intergenic	novelGene_2147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCCTTTTAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	58372233	58369445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58369400_58372200
ES.28200.1	chr6	+	1513	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	-56	-2	-56	0	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGTGTCCTGGCAGT	NA	False	NA	13	True	TATAAA	-18	NA	34897838	34916279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ES.28200.2	chr6	+	1268	8	FSM	ENSMUSG00000029848.12	ENSMUST00000114997.3	1207	8	-61	0	-11	0	multi-exon	FALSE	canonical	1	14	junction_2	25.1931315550691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897883	34916277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_34897990_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ES.28201.1	chr6	-	232	1	Intergenic	novelGene_23448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATACATAAAATACAT	NA	False	NA	NA	False	NA	NA	NA	34917078	34916846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_34916800_34917100
ES.28202.1	chr6	+	209	1	Intergenic	novelGene_23449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGGAAAACGTTTTGG	NA	False	NA	NA	False	AAGAAA	-7	NA	34935492	34935701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_34935500_34935700
ES.28203.1	chr6	+	661	3	Antisense	novelGene_ENSMUSG00000029847.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTCCTTGAGTCAGGA	NA	False	NA	NA	False	AATAAA	-16	NA	34965279	34975555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_34965416_34974434_34974560_34975155
ES.28204.1	chr6	-	3333	3	ISM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	39790	-2618	-37	1961	3prime_fragment	FALSE	canonical	3	8	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCGTGAGATCTATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	34925549	34920251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_34923272_34925142_34925239_34925332
ES.28204.2	chr6	-	2865	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	-205	-657	-205	0	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGATGTAGCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	34965544	34922212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
ES.28204.3	chr6	-	3450	11	NIC	ENSMUSG00000029847.14	novel	2003	12	NA	NA	-47	0	intron_retention	FALSE	canonical	2	5	junction_6	2.57681974534503	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGATGTAGCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	34965386	34922212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
ES.28205.1	chr6	+	3501	1	Intergenic	novelGene_23452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATACTGTGCCAATATCC	NA	False	NA	NA	False	NA	NA	NA	35015708	35019209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35015700_35019200
ES.28205.2	chr6	+	895	1	Intergenic	novelGene_23451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACTCTGTGAAATGGG	NA	False	NA	NA	False	NA	NA	NA	35015708	35016603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35015700_35016600
ES.28206.1	chr6	+	158	1	Intergenic	novelGene_23454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAATAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35078088	35078246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35078100_35078200
ES.28207.1	chr6	+	1296	1	Intergenic	novelGene_23456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	35092158	35093454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35092200_35093500
ES.28208.1	chr6	-	4479	1	Intergenic	novelGene_23450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTAGCATGAGTTTCCG	NA	False	NA	NA	False	NA	NA	NA	34998992	34994513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_34994500_34999000
ES.28208.10	chr6	-	2727	7	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	73.0753036257804	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7662	False	NA	-3	True	AATAAA	-19	NA	35110643	34999000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35110436
ES.28208.11	chr6	-	3266	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	66.6156888427944	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7647	False	NA	-3	True	AATAAA	-19	NA	35110658	34999000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.12	chr6	-	3338	13	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.0381844577813	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7655	False	NA	-4	True	AATAAA	-18	NA	35110650	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35029937_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.13	chr6	-	3466	12	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.9480677730049	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7626	False	NA	-4	True	AATAAA	-18	NA	35110679	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.14	chr6	-	3507	14	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	74.460505396521	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7662	False	NA	-4	True	AATAAA	-18	NA	35110643	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35029937_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35062624_35062735_35110436
ES.28208.15	chr6	-	3213	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.9754068162693	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7666	False	NA	-4	True	AATAAA	-18	NA	35110639	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.16	chr6	-	3393	12	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	76.4315715131316	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7662	False	NA	-4	True	AATAAA	-18	NA	35110643	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35062624_35062735_35110436
ES.28208.17	chr6	-	3670	13	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	71.4047539656071	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGGGTGAGTCTTGT	7655	False	NA	-4	True	AATAAA	-18	NA	35110650	34999001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35103243_35103411_35110436
ES.28208.18	chr6	-	3036	10	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	65.4948871814707	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7657	False	NA	-5	True	AATAAA	-17	NA	35110648	34999002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35110436
ES.28208.19	chr6	-	3252	11	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	64.4468773487126	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7655	False	NA	-5	True	AATAAA	-17	NA	35110650	34999002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.2	chr6	-	3545	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-56	-16	-21	10	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGTTCTTGTTTTTTC	7625	False	NA	8	True	AATAAA	-30	NA	35110680	34998989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.20	chr6	-	3284	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.307876765809	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7655	False	NA	-5	True	AATAAA	-17	NA	35110650	34999002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000359_35027992_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.22	chr6	-	3605	13	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_12	68.4934607584306	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7662	False	NA	-5	True	AATAAA	-17	NA	35110643	34999002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35062624_35062735_35110436
ES.28208.23	chr6	-	3308	12	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.6387504831184	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	7662	False	NA	-5	True	AATAAA	-17	NA	35110643	34999002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001146_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.24	chr6	-	3419	13	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	61.2473922347356	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCCTCGGGTGAGTCTT	7638	False	NA	-6	True	AATAAA	-16	NA	35110667	34999003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35029937_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.25	chr6	-	9266	5	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	68734	-7004	-8581	6963	3prime_fragment	FALSE	canonical	3	71	junction_1	52.1991379239159	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGGATTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	35041925	35014926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832
ES.28208.26	chr6	-	5207	10	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	53653	-2289	-23662	2248	3prime_fragment	FALSE	canonical	3	71	junction_1	40.7070230844146	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAAAGTTGGATATCTG	8013	False	NA	NA	False	NA	NA	NA	35057006	35019641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895
ES.28208.27	chr6	-	4782	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	-5	-1440	4	1440	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGTTTCTTCAGGTT	7650	False	NA	NA	False	GATAAA	-21	NA	35110655	35020449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.28	chr6	-	4338	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	7	-1049	-2	1008	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGACTTCAGGTTTGTC	7653	False	NA	NA	False	ATTAAA	-24	NA	35110652	35020881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.29	chr6	-	3890	10	NNC	ENSMUSG00000038784.14	novel	3296	11	NA	NA	-10	819	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	68.7121388452678	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTGTTTTTTTTT	7666	False	NA	NA	False	ATTAAA	-42	NA	35110639	35021070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35029839_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.3	chr6	-	3557	12	NIC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	-26	8	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	55.9338452220327	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGTTCTTGTTTTT	7620	False	NA	6	True	AATAAA	-28	NA	35110685	34998991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.30	chr6	-	4174	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	-29	-808	-20	808	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGTCATTTTTTTGT	7626	False	NA	NA	False	ATTAAA	-31	NA	35110679	35021081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.31	chr6	-	3714	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-26	-392	-26	351	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGGTTTCATTTGACTA	7620	False	NA	NA	False	ATTAAA	-31	NA	35110685	35021538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.32	chr6	-	3454	10	NIC	ENSMUSG00000038784.14	novel	3337	11	NA	NA	-20	338	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.1156920123474	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTAATTCAATTATGGG	7626	False	NA	NA	False	ATTAAA	-18	NA	35110679	35021551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35023294_35027996_35028495_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.33	chr6	-	3468	12	NNC	ENSMUSG00000038784.14	novel	3296	11	NA	NA	-20	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.2671078323717	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCATTGGCATTTTT	7626	False	NA	NA	False	AATAAA	-29	NA	35110679	35021871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35103317_35103411_35110436
ES.28208.34	chr6	-	3365	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-20	-49	-20	8	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAATGTTATATAGCAT	7626	False	NA	NA	False	AATAAA	-19	NA	35110679	35021881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.35	chr6	-	3090	10	NNC	ENSMUSG00000038784.14	novel	3337	11	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	68.7121388452678	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAATGTTATATAGCAT	7655	False	NA	NA	False	AATAAA	-19	NA	35110650	35021881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35029839_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.36	chr6	-	3349	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	-8	-4	1	4	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGCTAATGTTATATA	7647	False	NA	NA	False	AATAAA	-15	NA	35110658	35021885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.37	chr6	-	3126	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	10	160	1	-160	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAATCTGATTTAAAAA	7656	False	NA	NA	False	NA	NA	NA	35110649	35022090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.38	chr6	-	3364	11	NNC	ENSMUSG00000038784.14	novel	3337	11	NA	NA	292	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.6042491639137	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATAAACTGAAC	8037	False	NA	NA	False	NA	NA	NA	35110268	35022126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35109790
ES.28208.39	chr6	-	2536	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	1	759	1	-759	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCAGCTGTTGTTT	7647	False	NA	NA	False	TATAAA	-34	NA	35110658	35022689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.4	chr6	-	3199	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.2987389559254	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7658	False	NA	-2	True	AATAAA	-20	NA	35110647	34998999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.40	chr6	-	2191	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-20	1125	-20	-1125	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGCGTGGACCTCGTAG	7626	False	NA	0	True	TATAAA	-17	NA	35110679	35023055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.41	chr6	-	6852	10	ISM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	-15	24052	-10	-1127	5prime_fragment	FALSE	canonical	3	141	junction_8	25.7629267565183	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTAGCGTGGACCTCGT	7666	False	NA	-2	True	TATAAA	-15	NA	35110639	35023057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.42	chr6	-	2158	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	11	1168	-10	-1127	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTAGCGTGGACCTCGT	7666	False	NA	-2	True	TATAAA	-15	NA	35110639	35023057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.43	chr6	-	2287	12	NNC	ENSMUSG00000038784.14	novel	3296	11	NA	NA	-20	-1127	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	73.0981452772586	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTAGCGTGGACCTCGT	7626	False	NA	-2	True	TATAAA	-15	NA	35110679	35023057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35105746_35105845_35110436
ES.28208.44	chr6	-	2091	11	NNC	ENSMUSG00000038784.14	novel	3296	11	NA	NA	2	-1128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	65.7727147075442	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTAGCGTGGACCTCG	7657	False	NA	-3	True	TATAAA	-14	NA	35110648	35023058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056895_35057162_35110436
ES.28208.45	chr6	-	3816	8	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	55709	3531	-21606	-3531	internal_fragment	FALSE	canonical	3	153	junction_3	20.0906110673923	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATCTGAAAAAC	NA	False	NA	NA	False	TATAAA	-5	NA	35054950	35025461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915
ES.28208.46	chr6	-	2703	10	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-12	5308	-12	2165	5prime_fragment	FALSE	canonical	3	141	junction_8	25.7629267565183	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATTCTGGTTAACTGT	7634	False	NA	NA	False	AATGAA	-12	NA	35110671	35027238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.47	chr6	-	2345	10	ISM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	-32	5686	-32	1787	5prime_fragment	FALSE	canonical	3	141	junction_8	25.7629267565183	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTCAAAATTAATGAG	7614	False	NA	NA	False	AATAAA	-43	NA	35110691	35027616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.48	chr6	-	2230	10	NNC	ENSMUSG00000038784.14	novel	3337	11	NA	NA	0	1775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	81.2950729681011	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTAAAATTTTTTTAGTC	7655	False	NA	NA	False	AATAAA	-31	NA	35110650	35027628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054981_35055114_35056891_35057162_35110436
ES.28208.49	chr6	-	980	1	Intergenic	novelGene_23453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35037298	35036318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35036300_35037300
ES.28208.5	chr6	-	4745	2	ISM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	106185	-6	-2640	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	NA	False	NA	-2	True	AATAAA	-20	NA	35004439	34998999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35000368_35001062
ES.28208.50	chr6	-	211	1	Intergenic	novelGene_23455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGATCTTGCATCT	9844	False	NA	NA	False	AAGAAA	-14	NA	35091126	35090915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35090900_35091100
ES.28208.6	chr6	-	3322	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202143.4	3202	11	-120	0	-21	0	multi-exon	FALSE	canonical	3	23	junction_1	54.0722664588789	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7625	False	NA	-2	True	AATAAA	-20	NA	35110680	34998999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.7	chr6	-	3301	11	FSM	ENSMUSG00000038784.14	ENSMUST00000114989.9	3279	11	-21	-1	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.3360543651053	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7655	False	NA	-2	True	AATAAA	-20	NA	35110650	34998999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28208.8	chr6	-	3610	13	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	70.3125462962811	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7647	False	NA	-3	True	AATAAA	-19	NA	35110658	34999000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35105746_35105845_35110436
ES.28208.9	chr6	-	3373	12	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.7705343998197	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7656	False	NA	-3	True	AATAAA	-19	NA	35110649	34999000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35000368_35001062_35001146_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ES.28209.1	chr6	+	9393	4	Intergenic	novelGene_23457	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	1.24721912892465	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGTATTTGTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	35111333	35134657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35111506_35114080_35114207_35125522_35130714_35130753
ES.28209.2	chr6	+	180	1	Intergenic	novelGene_23459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35124410	35124590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35124400_35124600
ES.2821.1	chr10	-	3706	12	FSM	ENSMUSG00000003227.5	ENSMUST00000003312.5	3637	12	-76	7	-76	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGACCTACAGACT	NA	False	NA	NA	False	AATAAA	-10	NA	58511552	58436617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_58439007_58441866_58441928_58443161_58443322_58445759_58445833_58446095_58446171_58446268_58446395_58447778_58447866_58457134_58457221_58464281_58464464_58465187_58465311_58465885_58465955_58511277
ES.28210.1	chr6	-	180	1	Intergenic	novelGene_23458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAATAAAAAA	4762	False	NA	NA	False	NA	NA	NA	35113543	35113363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35113400_35113500
ES.28211.1	chr6	+	176	1	Intergenic	novelGene_23460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAATTAGTGATA	NA	False	NA	NA	False	NA	NA	NA	35149045	35149221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35149000_35149200
ES.28212.1	chr6	-	178	1	Intergenic	novelGene_23461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAAACAGAAACA	NA	False	NA	2	True	NA	NA	NA	35151175	35150997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35151000_35151200
ES.28213.1	chr6	-	164	1	Intergenic	novelGene_23462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGACCTTCATTTCA	NA	False	NA	NA	False	AAAAAG	-9	NA	35154235	35154071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35154100_35154200
ES.28214.1	chr6	+	6528	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	-12	-104	-3	104	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACATTCTGTATCCTTC	NA	False	NA	NA	False	NA	NA	NA	35154352	35224635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.11	chr6	+	6326	42	NIC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	1	7	intron_retention	FALSE	canonical	2	193	junction_5	62.8466117556167	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154551	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.12	chr6	+	4067	28	ISM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	187	21526	1	-12099	5prime_fragment	FALSE	canonical	2	193	junction_5	38.070110760718	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTCTAATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	35154551	35203005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724
ES.28214.13	chr6	+	6150	42	NIC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	81.013214894284	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154552	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.16	chr6	+	6223	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	93.8702607343781	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154552	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191586_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204239_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.17	chr6	+	6093	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	80.036843131794	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154553	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204410_35204640_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.18	chr6	+	6259	44	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_15	91.3085332391948	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGGTCATTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	35154553	35224534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35181629_35181663_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.19	chr6	+	6225	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.4357498283185	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTGTGGTCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	35154553	35224532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166192_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.2	chr6	+	6409	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	80.0804619460173	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154353	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202745_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.20	chr6	+	7710	44	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_15	103.565463838879	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154554	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35183825_35184306_35184445_35185015_35185116_35185729_35185868_35187762_35187953_35189660_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.23	chr6	+	246	2	ISM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	4	21599	4	-21599	5prime_fragment	FALSE	canonical	3	226	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTTAGATCTATTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	35154554	35160989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35154595_35160783
ES.28214.24	chr6	+	8718	25	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	-11898	intron_retention	FALSE	canonical	0	0	junction_13	67.4740176331272	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35154554	35203206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35185116_35185732_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724
ES.28214.25	chr6	+	4678	32	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	-6032	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	65.7825225310759	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35154554	35209072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35208885
ES.28214.26	chr6	+	8204	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	intron_retention	FALSE	canonical	1	1	junction_15	78.662933729026	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35184445_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.27	chr6	+	6220	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.9646180260646	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154554	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171520_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.28	chr6	+	6307	44	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	91.4794039183987	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35219310_35219389_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.29	chr6	+	6163	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	77.2350749512234	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166125_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.3	chr6	+	6473	44	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_42	101.19458468571	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154356	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222439_35222515_35222956_35223016_35224195
ES.28214.30	chr6	+	10087	41	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	intron_retention	FALSE	non_canonical	0	0	junction_5	77.7283088713501	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166192_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.31	chr6	+	6204	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	79.2389394414736	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154554	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210381_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.34	chr6	+	4641	32	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	92.0341519201813	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35204658_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.35	chr6	+	6304	45	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	127.420466199946	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35183054_35183155_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196706_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35219310_35219389_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.36	chr6	+	2392	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	4	13	4	-13	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTCCATGATTCTGT	NA	False	NA	NA	False	AATAAA	-2	NA	35154554	35182575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
ES.28214.38	chr6	+	6356	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_40	76.6466255970835	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221883_35222182_35222312_35222956_35223016_35224195
ES.28214.39	chr6	+	6086	42	NIC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	4	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	78.9976994973743	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154554	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35154595_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.4	chr6	+	6414	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	78.3183116295796	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154362	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160790_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.40	chr6	+	5993	42	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.334399878613	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154555	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166190_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173657_35173792_35175777_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.46	chr6	+	6214	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	93.3484438691354	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGGTCATTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	35154556	35224534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160934_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.48	chr6	+	8182	42	NIC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_14	104.721988257048	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAAACAAATGTGTG	NA	False	NA	NA	False	AATAAA	-9	NA	35154557	35224524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35154585_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35183155_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.49	chr6	+	6392	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	10	7	intron_retention	FALSE	canonical	0	0	junction_15	104.936534647638	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154573	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35183054_35183155_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191592_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.5	chr6	+	6402	43	FSM	ENSMUSG00000038759.16	ENSMUST00000201374.4	6411	43	16	-7	7	7	multi-exon	FALSE	canonical	2	7	junction_1	77.9267236770451	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154371	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35154585_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.50	chr6	+	6507	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	23	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	101.100422113233	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154586	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189660_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220761_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.51	chr6	+	6508	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	29	7	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	74.8991347445852	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154592	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.54	chr6	+	4176	28	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	95	-12561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	81.0009060221306	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGCGGTTTTATA	NA	False	NA	NA	False	AATAAA	-10	NA	35154658	35202543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202363
ES.28214.56	chr6	+	2601	15	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	111	-1	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	75.8131766588239	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTTATTCCTTCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	35154674	35182587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
ES.28214.58	chr6	+	6385	43	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	89.7205948898707	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154686	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.59	chr6	+	6365	44	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	108.714112458785	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154689	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166125_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35181629_35181663_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.6	chr6	+	6204	43	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	-40	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	92.8014271187865	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35154510	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204504_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213805_35215923_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.60	chr6	+	6174	42	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	6219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	78.6033574656837	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35160782	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185732_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.63	chr6	+	5915	40	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	11060	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	113.755213158387	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35165623	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35165704_35166030_35166190_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211616_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221883_35222182_35222312_35222956_35223016_35224195
ES.28214.64	chr6	+	3254	22	ISM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	11788	22743	11589	-13316	internal_fragment	FALSE	canonical	2	193	junction_1	38.9139990199914	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTTCCACATCAATT	NA	False	NA	NA	False	AATAAA	-28	NA	35166152	35201788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456
ES.28214.65	chr6	+	5604	39	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	12224	7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	92.8771416167781	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35166787	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35181629_35181663_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.66	chr6	+	5328	37	ISM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	14443	6	-13174	0	3prime_fragment	FALSE	canonical	3	231	junction_9	56.5410099173081	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35168807	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.67	chr6	+	3961	8	ISM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	14341	-1217	-13090	1217	intron_retention	FALSE	canonical	3	296	junction_2	20.5694443487501	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCATGCTTGATCATTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	35168891	35183805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897
ES.28214.68	chr6	+	5292	37	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	-11898	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	79.9137652506951	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35170083	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35170214_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.69	chr6	+	5159	36	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	-10644	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	95.2546061878375	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35171337	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182258_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224201
ES.28214.7	chr6	+	6332	44	NNC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	113.455413628251	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154529	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35154595_35160783_35160934_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35183054_35183155_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191319_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.70	chr6	+	4947	35	NIC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	-10624	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	79.9658501938911	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35171357	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.74	chr6	+	12918	11	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	-5541	-11872	intron_retention	TRUE	non_canonical	0	0	junction_2	98.1692416187474	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTATGAGCTAGAATGT	NA	False	NA	NA	False	NA	NA	NA	35176440	35203232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35176995_35178920_35185972_35186190_35187953_35189661_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35202200_35202724
ES.28214.75	chr6	+	4371	32	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	-5034	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	85.1328887146143	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	35176947	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218316_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.76	chr6	+	3845	27	ISM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	31363	-7	3746	7	3prime_fragment	FALSE	canonical	3	272	junction_2	54.5379326219335	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	486	False	NA	NA	False	AATAAA	-23	NA	35185727	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.77	chr6	+	4030	8	NIC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	5796	-11872	intron_retention	FALSE	canonical	3	272	junction_1	19.4789263417821	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTATGAGCTAGAATGT	2536	False	NA	NA	False	NA	NA	NA	35187777	35203232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35187953_35189661_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35202200_35202724
ES.28214.78	chr6	+	3537	26	NNC	ENSMUSG00000038759.16	novel	6411	43	NA	NA	5886	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	112.133163693887	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	2626	False	NA	NA	False	AATAAA	-10	NA	35187867	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201684_35202118_35202200_35202724_35202917_35204237_35204372_35204584_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.79	chr6	+	3517	25	ISM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	35295	-7	7678	7	3prime_fragment	FALSE	canonical	3	283	junction_7	50.8035260970032	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTCATTCTTTTGAA	4418	False	NA	NA	False	AATAAA	-23	NA	35189659	35224538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.8	chr6	+	3734	14	ISM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	-16	2	-16	-2	intron_retention	FALSE	canonical	2	193	junction_5	42.4764466582371	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTATTCCTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	35154534	35182586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897
ES.28214.80	chr6	+	3300	23	ISM	ENSMUSG00000038759.16	ENSMUST00000201609.4	4508	30	9598	6	9598	0	3prime_fragment	FALSE	canonical	3	283	junction_5	51.3507827843158	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	6338	False	NA	NA	False	AATAAA	-10	NA	35191579	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.81	chr6	+	3645	9	ISM	ENSMUSG00000038759.16	ENSMUST00000201609.4	4508	30	9619	17687	9619	-8260	intron_retention	FALSE	canonical	3	283	junction_5	19.824227601599	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAAACAAG	6359	False	NA	NA	False	NA	NA	NA	35191600	35206844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237
ES.28214.82	chr6	+	217	1	Intergenic	novelGene_23465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTCTAAGCTTATAT	NA	False	NA	NA	False	NA	NA	NA	35196265	35196482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35196300_35196500
ES.28214.83	chr6	+	3101	2	ISM	ENSMUSG00000038759.16	ENSMUST00000201609.4	4508	30	17667	21299	-1860	-11872	intron_retention	FALSE	canonical	3	322	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTATGAGCTAGAATGT	NA	False	NA	NA	False	NA	NA	NA	35199648	35203232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35200598_35201080
ES.28214.84	chr6	+	4662	15	NIC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	608	0	intron_retention	FALSE	canonical	3	316	junction_4	45.6099255220007	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35202116	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35202200_35202724_35202917_35204237_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.85	chr6	+	2456	17	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	659	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	104.138729587027	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35202167	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213709_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.86	chr6	+	3655	15	NIC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	1214	0	intron_retention	FALSE	canonical	3	316	junction_4	44.5162203870794	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35202722	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.87	chr6	+	1726	12	ISM	ENSMUSG00000038759.16	ENSMUST00000201609.4	4508	30	27350	6	7823	0	3prime_fragment	FALSE	canonical	3	369	junction_6	29.9492683998449	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	3893	False	NA	NA	False	AATAAA	-10	NA	35209331	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.89	chr6	+	1545	11	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	8766	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	126.385481761158	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	4836	False	NA	NA	False	AATAAA	-10	NA	35210274	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222940_35223016_35224195
ES.28214.9	chr6	+	6685	41	NIC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	77.0238234249638	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35154541	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35154595_35163367_35163540_35165558_35165704_35166030_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.90	chr6	+	4493	9	NIC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	8971	0	intron_retention	FALSE	canonical	3	369	junction_3	32.6895912332963	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	5041	False	NA	NA	False	AATAAA	-10	NA	35210479	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ES.28214.91	chr6	+	1292	9	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	-6301	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	181.070255702034	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	35215807	35224525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222439_35222515_35222956_35223016_35224195
ES.28215.1	chr6	-	325	1	Intergenic	novelGene_23463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTCTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	35156410	35156085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35156100_35156400
ES.28215.2	chr6	-	175	1	Intergenic	novelGene_23464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	35156411	35156236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35156200_35156400
ES.28216.1	chr6	-	2714	5	Antisense	novelGene_ENSMUSG00000038759.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGAAAGAACAGATCC	NA	False	NA	NA	False	NA	NA	NA	35172188	35162146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_35163537_35165554_35165706_35166031_35166189_35168806_35168972_35171337
ES.28216.2	chr6	-	3293	13	Antisense	novelGene_ENSMUSG00000038759.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGAAAGAACAGATCC	NA	False	NA	NA	False	NA	NA	NA	35182434	35162146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_35163537_35165554_35165706_35166031_35166189_35166787_35167018_35168807_35168972_35171337_35171513_35173363_35173483_35173650_35173789_35175767_35175921_35176787_35176994_35178919_35179101_35180894_35180947_35182257
ES.28216.3	chr6	-	8182	3	Antisense	novelGene_ENSMUSG00000038759.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGAAAGAACAGATCC	NA	False	NA	NA	False	NA	NA	NA	35173018	35162146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_35165699_35166022_35168972_35171337
ES.28216.4	chr6	-	4085	2	Antisense	novelGene_ENSMUSG00000038759.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACCAGTAGCAATGATG	NA	False	NA	NA	False	NA	NA	NA	35172189	35166314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_35167018_35168807
ES.28216.5	chr6	-	3709	7	Antisense	novelGene_ENSMUSG00000038759.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACCAGTAGCAATGATG	NA	False	NA	NA	False	NA	NA	NA	35180102	35166314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_35167018_35168807_35168972_35171337_35171514_35173363_35173483_35173650_35173789_35175767_35176994_35178919
ES.28217.1	chr6	-	170	1	Intergenic	novelGene_23466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35199263	35199093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35199100_35199300
ES.28218.1	chr6	+	1344	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	-584	1761	-584	98	multi-exon	FALSE	canonical	3	978	junction_2	33.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATTTTATGCATTCTA	NA	False	NA	111	True	AGTAAA	-24	NA	35229004	35238670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35229718_35237344_35237399_35238093
ES.28218.2	chr6	+	616	3	NNC	ENSMUSG00000073155.13	novel	2521	3	NA	NA	-318	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	487	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTGGTGAATTAATC	NA	False	NA	13	True	ATTAAA	-17	NA	35229270	35238572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35229354_35237344_35237399_35238093
ES.28218.4	chr6	+	986	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	45	1490	-17	-16	multi-exon	FALSE	canonical	3	978	junction_2	33.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAGTGTGGTGCAAAT	NA	False	NA	NA	False	ATTAAA	-38	NA	35229633	35238941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35229718_35237344_35237399_35238093
ES.28218.5	chr6	+	8246	2	NIC	ENSMUSG00000073155.13	novel	1232	3	NA	NA	-17	2	intron_retention	FALSE	canonical	3	978	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGGTGAATTAATCCA	NA	False	NA	15	True	ATTAAA	-19	NA	35229633	35238574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35237399_35238093
ES.28218.7	chr6	+	609	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	49	1863	-13	-4	multi-exon	FALSE	canonical	3	978	junction_2	33.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTTCTGGTGAATT	NA	False	NA	9	True	ATTAAA	-13	NA	35229637	35238568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_35229718_35237344_35237399_35238093
ES.28218.8	chr6	+	695	3	NNC	ENSMUSG00000073155.13	novel	690	4	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	489	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCCAGTTTCTGGTGAA	NA	False	NA	7	True	ATTAAA	-11	NA	35229650	35238566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_35229819_35237344_35237399_35238093
ES.28218.9	chr6	+	4508	1	NIC	ENSMUSG00000073155.13	novel	2521	3	NA	NA	4397	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTCTGGTGAATTAAT	NA	False	NA	12	True	ATTAAA	-16	NA	35234063	35238571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_35234100_35238600
ES.28219.1	chr6	+	196	1	Intergenic	novelGene_23467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGCCAAAAACTAG	NA	False	NA	NA	False	NA	NA	NA	35249915	35250111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35249900_35250100
ES.2822.1	chr10	-	159	1	Intergenic	novelGene_2151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAGAAAGCTTTAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	58525947	58525788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_58525800_58525900
ES.28220.1	chr6	+	1013	3	Antisense	novelGene_ENSMUSG00000029843.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	2	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGGGTTGTATTCA	3539	False	NA	NA	False	NA	NA	NA	35256277	35263797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_35256459_35262449_35262575_35263090
ES.28221.1	chr6	-	3461	16	FSM	ENSMUSG00000029843.5	ENSMUST00000031868.5	3427	16	-32	-2	-32	2	multi-exon	FALSE	canonical	2	6	junction_8	3.05213950460256	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGAGGTCTACTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	35285098	35244889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251976_35252575_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260255_35261564_35261605_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
ES.28222.1	chr6	-	7488	1	Intergenic	novelGene_23468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2194	False	NA	NA	False	NA	NA	NA	35323945	35316457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35316500_35323900
ES.28222.2	chr6	-	569	1	Intergenic	novelGene_23469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCGAGAGAGTCGCAGAG	2812	False	NA	NA	False	NA	NA	NA	35323327	35322758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35322800_35323300
ES.28223.1	chr6	+	655	4	Intergenic	novelGene_23470	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTAGGCTTTCTCTTAG	NA	False	NA	NA	False	AATAAA	-15	NA	35333517	35353581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35333634_35343044_35343179_35349228_35349338_35353285
ES.28224.1	chr6	-	158	1	Intergenic	novelGene_23471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35348248	35348090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_35348100_35348200
ES.28225.1	chr6	-	3814	1	Genic_Genomic	ENSMUSG00000029840.9	novel	NA	NA	NA	NA	29789	2709	mono-exon	FALSE	NA	NA	NA	NA	NA	559	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGCAGTGGTGGTGTG	NA	False	NA	NA	False	AATAAA	-44	NA	35486945	35483131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_35483100_35486900
ES.28225.10	chr6	-	3170	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	-23	813	-23	-813	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCACTGTATCAAAAACAG	4125	False	NA	70	True	ATTAAA	-15	NA	35516846	35486653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.11	chr6	-	2997	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	40	923	40	-923	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACGCATTAATAAAAGGT	4188	False	NA	-40	True	AATAAA	-28	NA	35516783	35486763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.12	chr6	-	2957	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	-24	1027	-24	-1027	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTTATTTATAATGTAT	4124	False	NA	NA	False	NA	NA	NA	35516847	35486867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.15	chr6	-	1906	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	49	2005	-40	-2005	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTAAGATGTCTTTTG	4197	False	NA	21	True	AATAAA	-44	NA	35516774	35487845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.16	chr6	-	648	1	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	27821	2514	27732	-2514	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATCATAGCCAT	NA	False	NA	NA	False	AGTAAA	-9	NA	35489002	35488354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_35488400_35489000
ES.28225.17	chr6	-	1271	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	66	2623	-23	-2623	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAGGAATCATTCCAG	4214	False	NA	NA	False	TATAAA	-20	NA	35516757	35488463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.18	chr6	-	900	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	43	3017	43	-3017	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTTCTCAGCTCCCTA	4191	False	NA	NA	False	AATACA	-16	NA	35516780	35488857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.19	chr6	-	724	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	99	3137	10	-3137	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGGAATGTGATGAGAC	4247	False	NA	NA	False	AATAAA	-18	NA	35516724	35488977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.2	chr6	-	4217	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	40	-297	40	297	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGAAGTCTTGTTGATA	4188	False	NA	NA	False	NA	NA	NA	35516783	35485543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.20	chr6	-	2587	1	NIC	ENSMUSG00000029840.9	novel	3960	4	NA	NA	-18	-15302	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGCCATTCATTGGCT	4219	False	NA	NA	False	NA	NA	NA	35516752	35514165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_35514200_35516800
ES.28225.3	chr6	-	3934	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	45	-19	-44	19	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTTTTTTTAACTTCAA	4193	False	NA	NA	False	ATTAAA	-34	NA	35516778	35485821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.4	chr6	-	3890	4	NNC	ENSMUSG00000029840.9	novel	3960	4	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	359.696476985188	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGATGCTGCTCATAGAAA	4196	False	NA	NA	False	ATTAAA	-13	NA	35516775	35485842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35489253_35498834_35498912_35499629_35499731_35516473
ES.28225.5	chr6	-	3851	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	-21	130	-21	-130	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACTGTTGCCTTCCTTT	4127	False	NA	0	True	NA	NA	NA	35516844	35485970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28225.8	chr6	-	3506	4	NNC	ENSMUSG00000029840.9	novel	3960	4	NA	NA	459	-162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	365.396892281378	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGATAACATGTTAGCAAC	4696	False	NA	-32	True	AATAAA	-14	NA	35516275	35486002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_35489253_35498834_35498919_35499616_35499731_35516217
ES.28225.9	chr6	-	3547	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	44	369	44	-369	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAAACAATCTTTCTAA	4192	False	NA	NA	False	TTTAAA	-34	NA	35516779	35486209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ES.28226.1	chr6	+	5558	1	Intergenic	novelGene_23472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGTTCCTTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	35972876	35978434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_35972900_35978400
ES.28227.1	chr6	+	467	2	Antisense	novelGene_ENSMUSG00000106872.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTAATTTTATGCCA	NA	False	NA	NA	False	NA	NA	NA	36611045	36624261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_36611230_36623978
ES.28228.1	chr6	+	3790	1	FSM	ENSMUSG00000107310.2	ENSMUST00000202891.2	3039	1	-196	-555	-148	555	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGAGGGAAATCCAAAC	NA	False	NA	NA	False	NA	NA	NA	36933588	36937378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_36933600_36937400
ES.28229.1	chr6	+	220	1	Intergenic	novelGene_23473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAATTTTCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	37139722	37139942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37139700_37139900
ES.2823.1	chr10	+	889	2	Genic_Genomic	ENSMUSG00000112424.2	novel	2298	1	NA	NA	-7766	-1849	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCGCGTGTTGTAATCA	NA	False	NA	NA	False	AATAAA	-15	NA	58585325	58593540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_58585423_58592748
ES.2823.2	chr10	+	797	2	Genic_Genomic	ENSMUSG00000112424.2	novel	2298	1	NA	NA	-4042	-1942	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAGGACAAATTGTCAA	NA	False	NA	NA	False	AATAAA	-19	NA	58589049	58593447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_58589148_58592748
ES.28230.1	chr6	+	144	1	Intergenic	novelGene_23474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGGCTTGAGAG	NA	False	NA	NA	False	NA	NA	NA	37140219	37140363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37140200_37140400
ES.28231.1	chr6	-	5761	28	NNC	ENSMUSG00000038665.16	novel	4596	34	NA	NA	86631	1048	intron_retention	FALSE	canonical	0	0	junction_6	0.916245694581702	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAGTATTTCATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	37189941	36887353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_36890685_36892316_36892445_36893355_36893397_36897288_36897359_36911571_36911617_36914255_36914336_36952081_36952183_36971793_36971857_36976976_36977177_36989805_36989918_36993539_36993614_36996850_36996914_36998144_36998201_37006697_37006777_37009797_37009936_37011518_37011633_37025054_37025116_37027104_37027188_37034296_37034396_37034888_37034964_37040831_37040949_37044248_37044321_37064563_37064630_37073182_37073240_37074486_37074562_37111188_37111285_37126483_37126593_37189785
ES.28232.1	chr6	+	137	1	Intergenic	novelGene_23475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37384501	37384638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37384500_37384600
ES.28233.1	chr6	-	6485	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40981	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTGGTCTTTAAATC	7991	False	NA	0	True	AATAAA	-18	NA	37354451	37304189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
ES.28233.10	chr6	-	3141	12	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	86	3170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.0516780926679	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37418995	37308056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309448_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.11	chr6	-	6144	9	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	2	3170	intron_retention	FALSE	canonical	0	0	junction_7	31.8175953679721	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419079	37308056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37356746_37356964_37418633
ES.28233.12	chr6	-	5220	11	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-143	3170	intron_retention	FALSE	canonical	3	82	junction_9	9.78825827203185	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419224	37308056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.13	chr6	-	2635	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40998	3170	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	7974	False	NA	NA	False	ATTAAA	-25	NA	37354468	37308056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
ES.28233.15	chr6	-	3032	11	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	2	3165	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	29.7639043137825	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTTTCCTCTTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	37419079	37308061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37356746_37356964_37418633
ES.28233.17	chr6	-	2624	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40952	3164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.9806892652156	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCTTTCCTCTTTC	8020	False	NA	NA	False	ATTAAA	-19	NA	37354422	37308062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340861_37341079_37354383
ES.28233.18	chr6	-	3354	13	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	1	3164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.5538985608922	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCTTTCCTCTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	37419080	37308062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37407672_37407819_37418633
ES.28233.19	chr6	-	3245	12	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-9	3164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	28.4032357602597	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCTTTCCTCTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	37419090	37308062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340875_37341079_37356746_37356964_37418633
ES.28233.2	chr6	-	7113	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-31	0	-31	0	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTGGTCTTTAAATC	NA	False	NA	0	True	AATAAA	-18	NA	37419112	37304189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.20	chr6	-	2645	12	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40946	3164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.603003705927	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCTTTCCTCTTTC	8026	False	NA	NA	False	ATTAAA	-19	NA	37354416	37308062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37336750_37336819_37339292_37339381_37340902_37341079_37354383
ES.28233.21	chr6	-	1979	6	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-354	3163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.8681522517843	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATCCTTTCCTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37313824	37308063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37313340_37313482_37313805
ES.28233.22	chr6	-	3324	13	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	3	3162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.5538985608922	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATCCTTTCCTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	37419078	37308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37407698_37407819_37418633
ES.28233.23	chr6	-	3213	12	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	3	3162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.7795841319835	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATCCTTTCCTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	37419078	37308064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311288_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.24	chr6	-	3366	11	ISM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-9	5587	-9	1450	5prime_fragment	FALSE	canonical	3	82	junction_9	9.78825827203185	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCCAGAGCAGATGTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	37419090	37309776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.25	chr6	-	2738	10	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40964	1445	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	26.8829194475729	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTAATTCCAGAGCAGA	8008	False	NA	NA	False	ATTAAA	-18	NA	37354434	37309781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
ES.28233.26	chr6	-	3235	11	ISM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	3	5706	3	1331	5prime_fragment	FALSE	canonical	3	82	junction_9	9.78825827203185	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGCTGGGAGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	37419078	37309895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.3	chr6	-	4744	13	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8820681123589	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTGGTCTTTAAATC	NA	False	NA	0	True	AATAAA	-18	NA	37419112	37304189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37305460_37307828_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.4	chr6	-	7180	1	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	2096	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGTTGCCTGGTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	37311374	37304194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_37304200_37311400
ES.28233.5	chr6	-	6800	12	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	11212	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	29.0280571029746	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGTTGCCTGGTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	37407869	37304194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37407698
ES.28233.6	chr6	-	3355	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-19	3746	-19	3291	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTACACTTTGTATTT	NA	False	NA	NA	False	AAGAAA	-1	NA	37419100	37307935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28233.7	chr6	-	2712	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40959	3286	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTGCTTACACTTTG	8013	False	NA	NA	False	TTTAAA	-45	NA	37354429	37307940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
ES.28233.8	chr6	-	2108	5	NIC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-37	3285	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	42.6636554927025	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTGCTTACACTTT	NA	False	NA	NA	False	TTTAAA	-44	NA	37313507	37307941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37313340
ES.28233.9	chr6	-	3270	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	-55	3867	-55	3170	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419136	37308056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ES.28234.1	chr6	+	1161	3	Intergenic	novelGene_23476	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGACTGTATTGCTTAC	NA	False	NA	22	True	ATTAAA	-22	NA	37419445	37424336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37419475_37422999_37423146_37423350
ES.28234.2	chr6	+	2455	3	Intergenic	novelGene_23477	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	37419445	37425500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37419605_37422999_37423146_37423350
ES.28234.3	chr6	+	2785	3	Intergenic	novelGene_23478	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	37419479	37425500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37419969_37422999_37423146_37423350
ES.28234.4	chr6	+	4153	2	Intergenic	novelGene_23479	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAATTTTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	37419495	37423853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37423146_37423350
ES.28235.1	chr6	+	177	1	Intergenic	novelGene_23480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37432323	37432500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37432300_37432500
ES.28236.1	chr6	+	173	1	Intergenic	novelGene_23481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	2740	False	NA	NA	False	NA	NA	NA	37532962	37533135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37533000_37533100
ES.28237.1	chr6	-	153	1	Intergenic	novelGene_23482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37534015	37533862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_37533900_37534000
ES.28238.1	chr6	-	177	1	Intergenic	novelGene_23483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	37556421	37556244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_37556200_37556400
ES.28239.1	chr6	+	176	1	Intergenic	novelGene_23484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37575973	37576149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37576000_37576100
ES.2824.1	chr10	+	135	1	Intergenic	novelGene_2152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	58631015	58631150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_58631000_58631200
ES.28240.1	chr6	+	165	1	Intergenic	novelGene_23485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACACATTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	37662770	37662935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37662800_37662900
ES.28241.1	chr6	+	196	1	Intergenic	novelGene_23486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAGTTAATTTTATCGA	NA	False	NA	NA	False	NA	NA	NA	37680370	37680566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37680400_37680600
ES.28242.1	chr6	+	3174	17	NNC	ENSMUSG00000029833.18	novel	1151	3	NA	NA	-129442	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.667701849963	1071	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37718303	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37718469_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.10	chr6	+	7467	18	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-78	0	intron_retention	FALSE	canonical	3	10	junction_10	131.561897493052	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847667	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928476_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.11	chr6	+	4082	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	168.806795100263	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847671	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37909233_37909302_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.12	chr6	+	6164	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	-73	-2151	-73	2151	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCTATCCTGACATAAT	NA	False	NA	NA	False	ATTAAA	-32	NA	37847672	37945382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.13	chr6	+	7505	18	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-42	-23	intron_retention	FALSE	non_canonical	0	0	junction_9	133.996978739891	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847703	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928374_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.14	chr6	+	3873	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-39	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	130.342817216753	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847706	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922540_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.16	chr6	+	6232	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	-39	-2151	-39	2151	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCTATCCTGACATAAT	NA	False	NA	NA	False	ATTAAA	-32	NA	37847706	37945382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.17	chr6	+	3933	18	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	161.195855425096	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847706	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.18	chr6	+	3896	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_9	126.816091201607	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847711	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926234_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.2	chr6	+	172	1	Intergenic	novelGene_23487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGCAAACAA	NA	False	NA	NA	False	NA	NA	NA	37723036	37723208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37723000_37723200
ES.28242.22	chr6	+	4032	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	158.807098218072	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGTTATTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37847730	37943228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930450_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.23	chr6	+	3971	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	157.19396094642	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847731	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928476_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.24	chr6	+	7486	18	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-12	0	intron_retention	FALSE	canonical	3	444	junction_8	56.0890912671043	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847733	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.25	chr6	+	6244	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	-8	2133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	132.592758121146	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTTTCTACAAGTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	37847737	37945364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941951_37942435
ES.28242.27	chr6	+	3792	18	NIC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	137.782638105539	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847746	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.28	chr6	+	3916	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	2	124	2	-124	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGAAGCAGAGTTCTT	NA	False	NA	NA	False	AATGAA	-15	NA	37847747	37943107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.29	chr6	+	1536	8	NNC	ENSMUSG00000029833.18	novel	2722	8	NA	NA	2	909	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	176.117191966379	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	37847747	37909328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37909233
ES.28242.3	chr6	+	918	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-111	-342	-111	342	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGTCTGTGGAGCAGCT	NA	False	NA	NA	False	TATAAA	-15	NA	37782909	37783827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37782900_37783800
ES.28242.30	chr6	+	3853	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	131.394185939734	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847747	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928476_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.31	chr6	+	7323	17	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_2	135.371017946974	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847748	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.32	chr6	+	3972	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	3	-23	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_14	158.910225840074	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847748	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934487_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.33	chr6	+	3718	18	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	3	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	205.092164276822	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847748	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37892101_37892233_37896308_37896426_37904460_37904576_37908290_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934487_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.34	chr6	+	3595	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	133.870999265877	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGTTATTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37847748	37943228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848058_37880454_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.36	chr6	+	3739	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.011448742664	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847749	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848058_37848245_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904469_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.37	chr6	+	3787	18	NIC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	134.857684822591	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847750	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.38	chr6	+	3954	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	129.095679418191	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847755	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926234_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.39	chr6	+	3901	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	10	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	133.906361238915	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847755	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892105_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.4	chr6	+	1144	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-111	-568	-111	568	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAAAATCCTAAAGCAC	NA	False	NA	NA	False	AATAAA	-42	NA	37782909	37784053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37782900_37784100
ES.28242.41	chr6	+	3923	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	127.986749410599	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847756	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941643_37941788_37942435
ES.28242.42	chr6	+	3663	17	NIC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	180.345404276766	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847759	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.43	chr6	+	3946	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	130.134782930603	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTATTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	37847762	37943232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926134_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.46	chr6	+	3613	17	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	19	-23	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	137.513053357672	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847764	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.48	chr6	+	3384	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	22	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.355745936322	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847767	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37847817_37848327_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.49	chr6	+	8383	1	NIC	ENSMUSG00000029833.18	novel	3048	4	NA	NA	22	-42290	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAGTTACTTGCCATT	NA	False	NA	NA	False	AATAAA	-21	NA	37847767	37856150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37847800_37856200
ES.28242.5	chr6	+	177	1	Intergenic	novelGene_23489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37821719	37821896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37821700_37821900
ES.28242.51	chr6	+	7268	19	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	130.342817216753	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847768	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37924506_37924688_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.52	chr6	+	3693	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	26	681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	130.355745936322	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTTTTGCTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	37847771	37943912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435_37942894_37943795
ES.28242.54	chr6	+	4293	9	ISM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	32	18012	32	1485	5prime_fragment	FALSE	canonical	3	444	junction_8	35.1878885413717	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTCACTGTTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	37847777	37925219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455
ES.28242.55	chr6	+	3483	16	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	34	-23	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	187.483996354059	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847779	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37908288_37908436_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.56	chr6	+	4039	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	133.403372807974	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847779	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935363_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.57	chr6	+	3404	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.355745936322	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847779	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37847817_37848318_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.58	chr6	+	3432	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	34	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.355745936322	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGTTATTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37847779	37943228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37847817_37848287_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.59	chr6	+	2961	12	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	164.153173782324	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847779	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.6	chr6	+	177	1	Intergenic	novelGene_23490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37826092	37826269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37826100_37826300
ES.28242.61	chr6	+	5714	17	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	35	2134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.31222920257	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTCTACAAGTAACAC	NA	False	NA	NA	False	ATTAAA	-15	NA	37847780	37945365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934487_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.62	chr6	+	5936	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	36	2117	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	131.394185939734	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAATGTCTTGAGTT	NA	False	NA	NA	False	AATATA	-3	NA	37847781	37945348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928476_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.63	chr6	+	4773	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	36	-869	36	869	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTAGAGAAATTTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	37847781	37944100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.65	chr6	+	8683	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	42	-4683	42	4683	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGATAGCTTTTTCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	37847787	37947914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.66	chr6	+	3794	19	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	133.403372807974	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847789	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934671_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.67	chr6	+	2284	7	ISM	ENSMUSG00000029833.18	ENSMUST00000149828.8	2722	8	52	14406	52	909	5prime_fragment	FALSE	canonical	3	461	junction_5	35.4106857695056	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	37847797	37909328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288
ES.28242.68	chr6	+	3873	18	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	174.378242984317	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847797	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935363_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.69	chr6	+	3482	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	56	402	56	-38	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATGTGTACAAGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	37847801	37942829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.7	chr6	+	4154	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	-112	0	-112	0	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847633	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.70	chr6	+	3734	18	NIC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	70	-3	combination_of_known_splicesites	TRUE	canonical	1	17	junction_3	133.791217818652	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGTTATTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	37847815	37943228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.71	chr6	+	3887	20	NNC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	77	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	168.139534456033	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847822	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935360_37935480_37935568_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.72	chr6	+	5425	17	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	378	2148	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	137.513053357672	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTGCTATCCTGACAT	NA	False	NA	NA	False	ATTAAA	-29	NA	37848123	37945379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.73	chr6	+	3384	19	NNC	ENSMUSG00000029833.18	novel	1151	3	NA	NA	-9875	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.870999265877	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37867546	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37867655_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.74	chr6	+	3238	17	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	7728	-341	-7006	-23	3prime_fragment	FALSE	canonical	3	87	junction_7	118.106000456158	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37885149	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.75	chr6	+	8790	16	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-6999	2148	intron_retention	FALSE	canonical	3	4	junction_11	140.528051766661	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTGCTATCCTGACAT	NA	False	NA	NA	False	ATTAAA	-29	NA	37885156	37945379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934487_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.76	chr6	+	8619	15	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	17	2149	intron_retention	FALSE	canonical	3	444	junction_5	58.8479968622032	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGCTATCCTGACATA	NA	False	NA	NA	False	ATTAAA	-30	NA	37892172	37945380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.77	chr6	+	3269	2	NNC	ENSMUSG00000029833.18	novel	3048	4	NA	NA	4306	15785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATCTTAAAATAATTGTT	NA	False	NA	NA	False	AAAAAG	-4	NA	37896461	37959016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37899711_37958996
ES.28242.78	chr6	+	2600	12	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	42925	-364	-5147	0	3prime_fragment	FALSE	canonical	3	87	junction_2	141.484631060926	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37920346	37943231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.79	chr6	+	5806	10	NNC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-3039	-23	intron_retention	FALSE	canonical	3	10	junction_2	177.743746742812	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37922454	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_37926334_37928386_37928476_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.8	chr6	+	4067	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	-105	-22	-105	22	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTGTTAGAGATGC	NA	False	NA	NA	False	ATTAAA	-43	NA	37847640	37943253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.80	chr6	+	4503	11	ISM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	74709	-2123	-3039	2123	3prime_fragment	FALSE	canonical	3	354	junction_1	78.8873247106276	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTTGAGTTTTTTCT	NA	False	NA	NA	False	ATTAAA	-4	NA	37922454	37945354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.81	chr6	+	2459	11	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	45033	-341	-3039	-23	3prime_fragment	FALSE	canonical	3	87	junction_1	147.494406673609	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37922454	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.82	chr6	+	5329	7	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	46109	5726	-1963	-5726	internal_fragment	FALSE	canonical	3	465	junction_1	53.4937691075637	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCATACTTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	37923530	37937141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496
ES.28242.83	chr6	+	2769	9	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	419	-23	intron_retention	FALSE	canonical	3	465	junction_1	53.4953268987114	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37925912	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.84	chr6	+	2990	8	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	53044	-1530	4972	1166	3prime_fragment	FALSE	canonical	3	465	junction_3	56.4616539551131	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTATAATACTCGTTATA	NA	False	NA	NA	False	AATAGA	-19	NA	37930465	37944397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28242.85	chr6	+	2134	1	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	9494	-5746	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37934987	37937121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37935000_37937100
ES.28242.86	chr6	+	3727	2	ISM	ENSMUSG00000029833.18	ENSMUST00000120238.2	3258	19	61412	-341	13340	-23	3prime_fragment	FALSE	canonical	3	559	junction_1	0	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37938833	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_37941788_37942435
ES.28242.87	chr6	+	6163	2	Intergenic	novelGene_23491	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTTTTAATTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	37947127	37959702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_37950692_37957103
ES.28242.9	chr6	+	3783	17	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	-81	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	195.902718204725	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37847664	37943208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ES.28243.1	chr6	-	171	1	Intergenic	novelGene_23488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	37814914	37814743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_37814700_37814900
ES.28244.1	chr6	-	1180	1	Antisense	novelGene_ENSMUSG00000029833.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGACTAAATAAATGATC	NA	False	NA	NA	False	AATAAA	-16	NA	37848267	37847087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_37847100_37848300
ES.28245.1	chr6	-	3108	1	Antisense	novelGene_ENSMUSG00000029833.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37857247	37854139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_37854100_37857200
ES.28246.1	chr6	-	3492	2	Antisense	novelGene_ENSMUSG00000029833.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAATTTCTAGACAGAC	NA	False	NA	NA	False	NA	NA	NA	37873693	37868219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_37870966_37872947
ES.28247.1	chr6	-	169	1	Intergenic	novelGene_23492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCATATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	37971198	37971029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_37971000_37971200
ES.28248.1	chr6	-	159	1	Intergenic	novelGene_23493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	37973750	37973591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_37973600_37973800
ES.28249.1	chr6	-	181	1	Intergenic	novelGene_23494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCTATTGATTA	3291	False	NA	NA	False	NA	NA	NA	38019995	38019814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38019800_38020000
ES.2825.1	chr10	+	4568	8	NIC	ENSMUSG00000037990.19	novel	5682	10	NA	NA	-16309	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.451753951452626	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGGCTGTGTGTCTCA	NA	False	NA	NA	False	AATAAA	-9	NA	58885163	58974732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_58885403_58907757_58907859_58919269_58919441_58920803_58920858_58922481_58922739_58939993_58940314_58966792_58967128_58971641
ES.2825.2	chr10	+	3611	4	NNC	ENSMUSG00000037990.19	novel	5682	10	NA	NA	24196	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCTGTGTGTCTCAAT	NA	False	NA	NA	False	AATAAA	-11	NA	58940051	58974734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_58940314_58966792_58967128_58971641_58972885_58972963
ES.28250.1	chr6	+	202	1	Intergenic	novelGene_23495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTTCACGTCAGACG	NA	False	NA	NA	False	NA	NA	NA	38034694	38034896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38034700_38034900
ES.28251.1	chr6	-	3239	21	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12489	0	125	0	3prime_fragment	FALSE	canonical	2	4	junction_15	2.50199920063936	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGATGTCGTTATTC	NA	False	NA	NA	False	NA	NA	NA	38073995	38025417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ES.28251.2	chr6	-	2860	22	NIC	ENSMUSG00000038600.13	novel	3307	22	NA	NA	119	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	2.77582697938851	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTAAGATGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	38074001	38025419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38025534_38025916_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ES.28251.3	chr6	-	3028	16	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12240	9601	-124	-6803	internal_fragment	FALSE	canonical	2	4	junction_10	2.71947707391615	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGGATCCTTTCTGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	38074244	38035018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ES.28251.4	chr6	-	4500	15	NNC	ENSMUSG00000038600.13	novel	666	5	NA	NA	174	-12595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.45894286080093	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTATTGAAGAGAGTC	NA	False	NA	NA	False	NA	NA	NA	38073946	38040810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38043558_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ES.28251.6	chr6	-	1424	10	ISM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	12477	30110	113	322	internal_fragment	FALSE	canonical	2	4	junction_4	2.10818510677892	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGTGCCCGAGGGATG	NA	False	NA	NA	False	TTTAAA	-13	NA	38074007	38055527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782
ES.28252.1	chr6	-	148	1	Intergenic	novelGene_23496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGAGTCTTGCTTAT	NA	False	NA	NA	False	AATAAA	-6	NA	38085236	38085088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38085100_38085200
ES.28253.1	chr6	+	153	1	Intergenic	novelGene_23498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	38192105	38192258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38192100_38192300
ES.28254.1	chr6	+	242	1	Intergenic	novelGene_23499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAGCAGAAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	38193572	38193814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38193600_38193800
ES.28254.10	chr6	+	179	1	Intergenic	novelGene_23506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCATGCAT	6795	False	NA	NA	False	NA	NA	NA	38291266	38291445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38291300_38291400
ES.28254.11	chr6	+	178	1	Intergenic	novelGene_23509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAAGCA	NA	False	NA	NA	False	NA	NA	NA	38302808	38302986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38302800_38303000
ES.28254.12	chr6	+	175	1	Intergenic	novelGene_23510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATTGCACTAT	NA	False	NA	NA	False	NA	NA	NA	38308030	38308205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38308000_38308200
ES.28254.2	chr6	+	154	2	Intergenic	novelGene_23500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38193577	38326128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38193691_38326087
ES.28254.3	chr6	+	170	1	Intergenic	novelGene_23501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	38212820	38212990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38212800_38213000
ES.28254.4	chr6	+	140	1	Antisense	novelGene_ENSMUSG00000047749.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	38266815	38266955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_38266800_38267000
ES.28254.5	chr6	+	164	1	Intergenic	novelGene_23504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAGATAAGAATTGCCT	NA	False	NA	NA	False	NA	NA	NA	38273898	38274062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38273900_38274100
ES.28254.6	chr6	+	3333	2	Antisense	novelGene_ENSMUSG00000047749.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	38275804	38280750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_38276144_38277756
ES.28254.7	chr6	+	2393	3	Antisense	novelGene_ENSMUSG00000047749.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	38275815	38280680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_38276144_38277756_38277853_38278711
ES.28254.8	chr6	+	3142	3	Antisense	novelGene_ENSMUSG00000047749.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	38275881	38280750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_38276144_38277756_38278412_38278525
ES.28254.9	chr6	+	160	1	Antisense	novelGene_ENSMUSG00000029826.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAACAGGTCTAGTAG	NA	False	NA	NA	False	NA	NA	NA	38283105	38283265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_38283100_38283300
ES.28255.1	chr6	+	356	1	Intergenic	novelGene_23515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTGTAAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	38336212	38336568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38336200_38336600
ES.28256.1	chr6	+	182	1	Intergenic	novelGene_23516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	38339744	38339926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38339700_38339900
ES.28257.1	chr6	-	11147	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-178	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	11.9845237228797	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGTGGTTCATTCC	NA	False	NA	4	True	NA	NA	NA	38231122	38100106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.10	chr6	-	3238	15	NIC	ENSMUSG00000063455.17	novel	10916	20	NA	NA	-12723	-1437	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	5.39652193357832	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTAGTTGCATTTGTTG	NA	False	NA	NA	False	AATACA	-20	NA	38158274	38104391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105463_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248
ES.28257.11	chr6	-	6911	19	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-285	-1438	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	12.4594403694944	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTAGTTGCATTTGTT	NA	False	NA	NA	False	AATACA	-19	NA	38231229	38104392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.13	chr6	-	6741	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-230	-1562	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	12.165752757894	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGTGGTTTCATTGT	NA	False	NA	NA	False	AATACA	-25	NA	38231174	38104516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105463_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.14	chr6	-	6854	20	FSM	ENSMUSG00000063455.17	ENSMUST00000169256.5	10968	20	-296	4410	-296	-1566	multi-exon	FALSE	canonical	2	8	junction_10	11.4859905031884	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATGTTGGTGGTTTCA	NA	False	NA	NA	False	AATACA	-21	NA	38231240	38104520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.15	chr6	-	4190	19	NNC	ENSMUSG00000063455.17	novel	10916	20	NA	NA	-451	-1570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5.92780641459291	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGACTATGTTGGTGGT	NA	False	NA	NA	False	AATACA	-17	NA	38171808	38104524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116403_38119530_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318
ES.28257.17	chr6	-	1212	1	Intergenic	novelGene_23497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	3074	False	NA	NA	False	NA	NA	NA	38107348	38106136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38106100_38107300
ES.28257.18	chr6	-	3524	5	NNC	ENSMUSG00000063455.17	novel	10916	20	NA	NA	-178	-26421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9008368054342	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATTGTGTGCATGTGT	NA	False	NA	NA	False	NA	NA	NA	38231122	38161483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38161715_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.19	chr6	-	4908	2	ISM	ENSMUSG00000063455.17	ENSMUST00000169256.5	10968	20	-269	69417	-269	-34465	5prime_fragment	FALSE	canonical	3	62	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGGGAGGTGTATTAA	NA	False	NA	NA	False	AATAAA	-25	NA	38231213	38169527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38174025_38230802
ES.28257.2	chr6	-	8273	20	FSM	ENSMUSG00000063455.17	ENSMUST00000169256.5	10968	20	-139	2834	-139	4	multi-exon	FALSE	canonical	2	8	junction_10	11.4859905031884	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTAATGTCTGTCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	38231083	38102944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38105511_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.4	chr6	-	4260	11	NNC	ENSMUSG00000063455.17	novel	10916	20	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.33552997403732	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAAAGTTAAGTTTAA	2248	False	NA	NA	False	ATTAAA	-8	NA	38145205	38102954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38105463_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125501_38126490_38126697_38132064_38132181_38134982_38135180_38145025
ES.28257.5	chr6	-	8449	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-376	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	11.6891881289324	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAATGAAAGTTAAGTT	NA	False	NA	NA	False	ATTAAA	-5	NA	38231320	38102957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105463_38107716_38107863_38113768_38113930_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.6	chr6	-	4111	18	NNC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-269	-1431	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	8.02159714528508	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTTGTTGTTTATT	NA	False	NA	NA	False	AATACA	-26	NA	38231213	38104385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135174_38145025_38145211_38151082_38151261_38154541_38154691_38158248_38158357_38160899_38161028_38167485_38167664_38168610_38168700_38230802
ES.28257.7	chr6	-	6856	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-172	-1437	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	11.9845237228797	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTAGTTGCATTTGTTG	NA	False	NA	NA	False	AATACA	-20	NA	38231116	38104391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
ES.28257.8	chr6	-	4093	19	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-115	-1437	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	6.59802626679251	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTAGTTGCATTTGTTG	NA	False	NA	NA	False	AATACA	-20	NA	38231059	38104391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38230802
ES.28258.1	chr6	-	177	1	Intergenic	novelGene_23502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38237746	38237569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38237600_38237700
ES.28259.1	chr6	-	218	1	Intergenic	novelGene_23503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTTGAAATCCAAATT	8693	False	NA	NA	False	AAGAAA	-19	NA	38245607	38245389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38245400_38245600
ES.2826.1	chr10	+	1476	1	Antisense	novelGene_ENSMUSG00000019917.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCATGCTAGAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	58998908	59000384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_58998900_59000400
ES.2826.2	chr10	+	4751	1	Antisense	novelGene_ENSMUSG00000019917.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58998923	59003674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_58998900_59003700
ES.28260.1	chr6	-	6607	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-67	-4	-67	4	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTATAGTGATTTTCT	NA	False	NA	-3	True	AATAAA	-18	NA	38276261	38264326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.10	chr6	-	2916	3	ISM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	4	4392	4	-4392	intron_retention	FALSE	canonical	3	137	junction_1	0.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAGAAACTTTTATC	NA	False	NA	NA	False	NA	NA	NA	38276190	38268722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38270073_38271992_38272255_38274886
ES.28260.11	chr6	-	1518	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	4	5014	4	-5014	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTCTTTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	38276190	38269344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.12	chr6	-	1291	4	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	-7	-5034	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	56.8057117628931	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATACTGTTTTCTGAT	NA	False	NA	NA	False	TTTAAA	-36	NA	38276201	38269364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38270073_38271992_38272255_38274886_38275023_38276016
ES.28260.13	chr6	-	1393	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	2	5141	2	-5141	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTAATATTTCATACT	NA	False	NA	NA	False	AATATA	-19	NA	38276192	38269471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.15	chr6	-	5539	1	NIC	ENSMUSG00000029826.15	novel	4944	13	NA	NA	43448	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTGTTTATGGTTC	NA	False	NA	-1	True	AATAAA	-31	NA	38287760	38282221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38282200_38287800
ES.28260.16	chr6	-	3669	15	NNC	ENSMUSG00000029826.15	novel	4944	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2597873141008	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGGTCTGTTTATGGT	9667	False	NA	-3	True	AATAAA	-29	NA	38331535	38282223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38282428_38282613_38282688_38284100_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.17	chr6	-	4961	13	NIC	ENSMUSG00000029826.15	novel	4944	13	NA	NA	-49	-14	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	30.4698165767735	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGCCCTCATTTGGT	9615	False	NA	-14	True	AATAAA	-18	NA	38331587	38282234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309424_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.18	chr6	-	5282	14	NNC	ENSMUSG00000029826.15	novel	4944	13	NA	NA	-589	-16	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	29.8203695126305	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATTTGCCCTCATTTG	9735	False	NA	-16	True	AATAAA	-16	NA	38332127	38282236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38332034
ES.28260.2	chr6	-	6434	4	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.6650485246234	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGTATAGTGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	38276207	38264328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38270073_38271992_38272138_38274886_38275023_38275798
ES.28260.21	chr6	-	5063	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	-369	250	-39	-250	multi-exon	FALSE	canonical	3	16	junction_3	27.2865453210104	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCACCATTCTCCAGTAT	9625	False	NA	NA	False	AATAAA	-18	NA	38331577	38282470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.22	chr6	-	3959	14	NNC	ENSMUSG00000029826.15	novel	4944	13	NA	NA	-924	-1289	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	30.2095247333583	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTTACAGATTGTGAAA	9400	False	NA	NA	False	AATAAA	-14	NA	38332462	38283509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38332419
ES.28260.24	chr6	-	3138	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	103	1703	103	-1703	multi-exon	FALSE	canonical	3	16	junction_3	27.2865453210104	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCGCCTTTGCATCTAA	NA	False	NA	NA	False	NA	NA	NA	38331105	38283923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.25	chr6	-	2692	1	Intergenic	novelGene_23505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAACTTAAGGGGTAAT	NA	False	NA	NA	False	NA	NA	NA	38287517	38284825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38284800_38287500
ES.28260.26	chr6	-	4513	12	FSM	ENSMUSG00000029826.15	ENSMUST00000143702.5	3364	12	-110	-1039	-110	1039	multi-exon	FALSE	canonical	3	16	junction_2	25.5129200780524	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGCACCATGGGGTTT	9884	False	NA	NA	False	ATTAAA	-16	NA	38331318	38286482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.27	chr6	-	4149	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	0	922	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.2711408109007	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGCGCATGTGTGC	9664	False	NA	NA	False	AATAAA	-18	NA	38331538	38291680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38291834_38292006_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.28	chr6	-	3413	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	-966	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	25.7077593128785	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9358	False	NA	-3	True	NA	NA	NA	38332504	38292602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331467_38332419
ES.28260.29	chr6	-	3090	9	FSM	ENSMUSG00000029826.15	ENSMUST00000114898.3	3052	9	-38	0	-38	0	multi-exon	FALSE	canonical	1	2	junction_5	27.0081006366608	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9626	False	NA	-3	True	NA	NA	NA	38331576	38292602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309424_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.3	chr6	-	6327	4	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	56.8057117628931	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGTATAGTGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	38276201	38264328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38270073_38271992_38272255_38274886_38275023_38276016
ES.28260.31	chr6	-	3488	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	-653	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	25.1474663083261	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9671	False	NA	-3	True	NA	NA	NA	38332191	38292602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38332034
ES.28260.32	chr6	-	3600	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	-337	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	25.7077593128785	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9987	False	NA	-3	True	NA	NA	NA	38331875	38292602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38331606
ES.28260.34	chr6	-	2275	8	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	72	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.131240821136	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGCAGTTGGATTT	9736	False	NA	-7	True	NA	NA	NA	38331466	38292606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296758_38302126_38302302_38306083_38306208_38308697_38308797_38313346_38313600_38317154_38317291_38330849
ES.28260.35	chr6	-	5415	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	-3468	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.2711408109007	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGCAGTTGGATTT	8064	False	NA	-7	True	NA	NA	NA	38335006	38292606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38332918
ES.28260.36	chr6	-	3665	8	NIC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	11	-4	intron_retention	FALSE	canonical	3	57	junction_6	13.0430996691581	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGCAGTTGGATTT	9675	False	NA	-7	True	NA	NA	NA	38331527	38292606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.37	chr6	-	2805	9	NNC	ENSMUSG00000029826.15	novel	3052	9	NA	NA	-95	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3657231652344	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGCAGTTGGATTT	9899	False	NA	-7	True	NA	NA	NA	38331303	38292606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293348_38296633_38296758_38302126_38302302_38306083_38306208_38308697_38308797_38309424_38310124_38313346_38313600_38317154_38317291_38330849
ES.28260.4	chr6	-	6332	5	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.1007246334534	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGTATAGTGATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	38276191	38264328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38266474_38266676_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.40	chr6	-	3309	9	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.8385411794512	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTTGCAGTTGGATT	9701	False	NA	-8	True	NA	NA	NA	38331501	38292607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317242_38330849
ES.28260.41	chr6	-	3387	10	NNC	ENSMUSG00000029826.15	novel	3400	9	NA	NA	-4404	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.2711408109007	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAACTTTGCAGTTGGAT	9990	False	NA	-9	True	NA	NA	NA	38335942	38292608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849_38331470_38335880
ES.28260.42	chr6	-	135	1	Intergenic	novelGene_23507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4597	False	NA	NA	False	NA	NA	NA	38294666	38294531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38294500_38294700
ES.28260.43	chr6	-	200	1	Intergenic	novelGene_23508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATGATTTTTGTATTT	8740	False	NA	NA	False	AATAAA	-18	NA	38299525	38299325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38299300_38299500
ES.28260.44	chr6	-	185	2	Intergenic	novelGene_23511	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAGAGTTCAT	5814	False	NA	NA	False	NA	NA	NA	38340118	38314187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38314195_38339940
ES.28260.45	chr6	-	263	1	Intergenic	novelGene_23512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCTACATCATAACTGC	4772	False	NA	NA	False	NA	NA	NA	38314979	38314716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38314700_38315000
ES.28260.46	chr6	-	159	1	Intergenic	novelGene_23513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAATAAATTAAAAAAAAA	4772	False	NA	NA	False	NA	NA	NA	38314979	38314820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38314800_38315000
ES.28260.47	chr6	-	176	1	Intergenic	novelGene_23514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	38325724	38325548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38325500_38325700
ES.28260.48	chr6	-	187	1	Intergenic	novelGene_23517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	5812	False	NA	NA	False	NA	NA	NA	38340120	38339933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38339900_38340100
ES.28260.5	chr6	-	6459	4	NNC	ENSMUSG00000047749.3	novel	6536	4	NA	NA	0	-68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.6650485246234	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTTGGCATTTTTTTT	NA	False	NA	-15	True	AATAAA	-24	NA	38276194	38264398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38270073_38271992_38272255_38274895_38275023_38275798
ES.28260.6	chr6	-	8629	15	Fusion	ENSMUSG00000029826.15_ENSMUSG00000047749.3	novel	4944	13	NA	NA	17609	-72	multi-exon	TRUE	canonical	0	0	junction_3	44.8193653480734	423	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATACTCTTGGCATTTT	6152	False	NA	-19	True	AATAAA	-20	NA	38313599	38264402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_38270073_38271992_38272255_38274886_38275023_38277015_38277085_38284177_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346
ES.28260.7	chr6	-	6400	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-101	237	-101	-237	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTGTTAGCTTCACTC	NA	False	NA	NA	False	AATAAA	-27	NA	38276295	38264567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.8	chr6	-	2339	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-17	4214	-17	-4214	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCAAGTTGTGACATT	NA	False	NA	NA	False	NA	NA	NA	38276211	38268544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28260.9	chr6	-	2161	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	-16	4391	-16	-4391	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAGAAACTTTTATCA	NA	False	NA	NA	False	NA	NA	NA	38276210	38268721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ES.28261.1	chr6	-	210	1	Intergenic	novelGene_23518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACTCAAAAAAAAAAAAAAG	4951	False	NA	NA	False	NA	NA	NA	38350591	38350381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38350400_38350600
ES.28262.1	chr6	+	467	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	-42	-77	-42	77	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTCTAACATTCTCC	1172	False	NA	NA	False	NA	NA	NA	38353699	38354166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38353700_38354200
ES.28263.1	chr6	+	4205	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	-10	0	-10	0	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTCATGTTTATGCA	3475	False	NA	NA	False	ATTAAA	-23	NA	38358393	38404582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ES.28263.10	chr6	+	3038	14	NNC	ENSMUSG00000056832.15	novel	4195	18	NA	NA	-34	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	8.2777237245013	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTGTGTTCATGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	38368407	38404577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062_38402592_38403168
ES.28263.2	chr6	+	2068	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	7	2120	7	-2120	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTAGCATTTCAGGACA	3492	False	NA	NA	False	AATAGA	-22	NA	38358410	38402462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ES.28263.3	chr6	+	2993	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	11	1191	11	-1191	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTGTCAGGCTTCCA	3496	False	NA	NA	False	CATAAA	-18	NA	38358414	38403391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ES.28263.4	chr6	+	4117	18	NNC	ENSMUSG00000056832.15	novel	4195	18	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.45273457162911	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTGTGTTCATGTTTA	3514	False	NA	NA	False	ATTAAA	-19	NA	38358432	38404578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368398_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ES.28263.6	chr6	+	1477	10	ISM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	34	23687	-22	5636	5prime_fragment	FALSE	canonical	3	25	junction_5	2.86744175568088	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTTTTGAGACA	3519	False	NA	NA	False	AATAAA	-17	NA	38358437	38380895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401
ES.28263.7	chr6	+	4066	17	NIC	ENSMUSG00000056832.15	novel	4195	18	NA	NA	-18	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	7.68699185312434	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATGTGTGTTCATGT	3523	False	NA	NA	False	ATTAAA	-16	NA	38358441	38404575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ES.28263.9	chr6	+	157	1	Intergenic	novelGene_23520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	38366274	38366431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38366300_38366400
ES.28264.1	chr6	-	157	1	Intergenic	novelGene_23519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	38359933	38359776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38359800_38359900
ES.28265.1	chr6	+	171	1	Intergenic	novelGene_23521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	38407849	38408020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38407800_38408000
ES.28265.2	chr6	+	491	1	Intergenic	novelGene_23522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAAAACTTTAT	NA	False	NA	NA	False	NA	NA	NA	38407850	38408341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38407800_38408300
ES.28266.1	chr6	+	145	1	Intergenic	novelGene_23523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGTTAGCTGACCTGC	NA	False	NA	NA	False	NA	NA	NA	38409627	38409772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38409600_38409800
ES.28267.10	chr6	+	6543	16	NIC	ENSMUSG00000038538.18	novel	5752	15	NA	NA	-25	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	12.2300177159861	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTTACTTTTGAAAATA	NA	False	NA	NA	False	NA	NA	NA	38410859	38501765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38499094
ES.28267.11	chr6	+	6251	18	NIC	ENSMUSG00000038538.18	novel	4243	17	NA	NA	-25	1709	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	15.2512975226558	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTGTCCCTGACAGCAA	NA	False	NA	NA	False	ATTAAA	-20	NA	38410859	38481223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.12	chr6	+	4281	12	ISM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	-25	26587	-25	-1284	5prime_fragment	FALSE	canonical	3	34	junction_1	4.65681762722389	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAATAAGGAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	38410859	38463111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009
ES.28267.13	chr6	+	4379	16	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	17.4259066398917	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	17	True	NA	NA	NA	38410862	38479513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.14	chr6	+	4553	19	NNC	ENSMUSG00000038538.18	novel	4243	17	NA	NA	-22	-1779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	17.8558182930265	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTAGTTGACAAA	NA	False	NA	NA	False	TATAAA	-12	NA	38410862	38487919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172_38479509_38487899
ES.28267.15	chr6	+	7679	18	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-21	3147	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	13.1069595079581	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAAATTGCCTTCAC	NA	False	NA	NA	False	ATTAAA	-22	NA	38410863	38482661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.16	chr6	+	6582	18	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-17	2602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	16.5675716104004	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGGTTCTTAAATCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	38410867	38482116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172_38481156_38481652
ES.28267.17	chr6	+	9438	17	FSM	ENSMUSG00000038538.18_ENSMUSG00000098285.3	ENSMUST00000039127.15	4243	17	-239	-4956	-16	142	multi-exon	FALSE	canonical	3	12	junction_6	15.3047174100014	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGATGTAATCCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	38410868	38484470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.19	chr6	+	3171	18	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-9	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	13.9159613120601	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAGAAAAGAAAA	NA	False	NA	39	True	NA	NA	NA	38410875	38479535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38467632_38475757_38475855_38476121_38476212_38479172
ES.28267.2	chr6	+	4640	17	FSM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	-130	10134	-130	50	multi-exon	FALSE	canonical	3	23	junction_13	12.8900094550004	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGGAAGAAGGAAGGAAG	NA	False	NA	68	True	NA	NA	NA	38410754	38479564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.20	chr6	+	4364	18	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-8	-1779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	16.7358885452169	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTAGTTGACAAA	NA	False	NA	NA	False	TATAAA	-12	NA	38410876	38487919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475740_38475855_38476121_38476212_38479172_38479509_38487899
ES.28267.21	chr6	+	5408	17	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-10	31	intron_retention	FALSE	canonical	3	27	junction_13	12.4698072860009	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGGAAAAAAAC	NA	False	NA	49	True	NA	NA	NA	38411097	38479545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.23	chr6	+	1747	1	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	179	-27484	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38411286	38413033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411300_38413000
ES.28267.24	chr6	+	4077	18	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	373	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	19.2476125333843	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGGAAAAAAAC	NA	False	NA	49	True	NA	NA	NA	38411480	38479545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461187_38464042_38464086_38466188_38466240_38467313_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.25	chr6	+	209	1	Intergenic	novelGene_23524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGATTAGCCAGGGT	NA	False	NA	NA	False	NA	NA	NA	38427787	38427996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38427800_38428000
ES.28267.26	chr6	+	3873	1	Intergenic	novelGene_23525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCATAACTTTTATGC	NA	False	NA	NA	False	NA	NA	NA	38432042	38435915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38432000_38435900
ES.28267.27	chr6	+	5626	13	ISM	ENSMUSG00000038538.18	ENSMUST00000039127.15	4243	17	28844	-2196	214	2196	3prime_fragment	FALSE	canonical	3	12	junction_2	17.2014211299209	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGTAATCACTGATATA	5592	False	NA	NA	False	NA	NA	NA	38439951	38481710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.28	chr6	+	4276	10	NIC	ENSMUSG00000038538.18	novel	5752	15	NA	NA	-48	5235	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.1455023315337	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTAGTTGTTTCTGA	6268	False	NA	NA	False	AATAAA	-22	NA	38440627	38470514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318
ES.28267.29	chr6	+	173	1	Intergenic	novelGene_23527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	38453784	38453957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38453800_38454000
ES.28267.3	chr6	+	5467	14	NIC	ENSMUSG00000038538.18	novel	5752	15	NA	NA	-74	5235	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.8491475093088	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTAGTTGTTTCTGA	NA	False	NA	NA	False	AATAAA	-22	NA	38410810	38470514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318
ES.28267.30	chr6	+	7164	9	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-5166	35	intron_retention	FALSE	canonical	3	39	junction_3	13.8106616423689	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGGAAAAAAACTGGG	NA	False	NA	53	True	NA	NA	NA	38454915	38479549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.31	chr6	+	6934	2	NIC	ENSMUSG00000038538.18	novel	5521	5	NA	NA	3827	2146	intron_retention	FALSE	canonical	3	57	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38471765	38481660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38476212_38479172
ES.28267.32	chr6	+	9794	1	FSM	ENSMUSG00000098285.3	ENSMUST00000183689.3	69	1	-5081	-4644	-5081	4644	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATGATGTGTGTGTT	NA	False	NA	NA	False	AGTAAA	-34	NA	38479178	38488972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38479200_38489000
ES.28267.33	chr6	+	3840	2	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	11619	4380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCGTTGTAAATAAGTTC	NA	False	NA	NA	False	TATAAA	-19	NA	38479557	38483894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38481156_38481652
ES.28267.34	chr6	+	4751	2	NNC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	11688	-4824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGAGGGGGGGGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	38479626	38484874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38481156_38481652
ES.28267.35	chr6	+	6768	1	FSM	ENSMUSG00000098285.3	ENSMUST00000183689.3	69	1	-1330	-5369	-1330	5369	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGTCTCTTGTATTA	NA	False	NA	NA	False	AATAAA	-17	NA	38482929	38489697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38482900_38489700
ES.28267.4	chr6	+	4621	18	NIC	ENSMUSG00000038538.18	novel	4243	17	NA	NA	-73	31	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	15.2512975226558	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGGAAAAAAAC	NA	False	NA	49	True	NA	NA	NA	38410811	38479545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.5	chr6	+	1245	1	Genic_Genomic	ENSMUSG00000038538.18	novel	NA	NA	NA	NA	-73	-28461	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTCCACGTTAGGAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	38410811	38412056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_38410800_38412100
ES.28267.7	chr6	+	1440	1	Genic_Genomic	ENSMUSG00000038538.18	novel	NA	NA	NA	NA	-27	-28220	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38410857	38412297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_38410900_38412300
ES.28267.8	chr6	+	4471	17	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-26	36	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	17.2264331769522	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAAAAAAACTGGGG	NA	False	NA	54	True	NA	NA	NA	38410858	38479550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28267.9	chr6	+	4586	18	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	-25	50	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	13.1069595079581	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGGAAGAAGGAAGGAAG	NA	False	NA	68	True	NA	NA	NA	38410859	38479564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ES.28268.1	chr6	-	1251	1	Antisense	novelGene_ENSMUSG00000038538.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAGAGTCGTCACAGA	NA	False	NA	NA	False	NA	NA	NA	38411229	38409978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_38410000_38411200
ES.28269.1	chr6	-	176	1	Intergenic	novelGene_23526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATCAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	38443094	38442918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38442900_38443100
ES.2827.1	chr10	+	4879	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-397	0	-397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGAGTGTCTGTGGTTC	NA	False	NA	5	True	AATAAA	-22	NA	59057377	59062256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59057400_59062300
ES.2827.2	chr10	+	2970	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	-75	1587	-75	-1587	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCGTAATTACATTCCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	59057699	59060669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59057700_59060700
ES.28270.1	chr6	-	2818	1	Antisense	novelGene_ENSMUSG00000038538.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTATGTCTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	38481549	38478731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_38478700_38481500
ES.28271.1	chr6	-	362	1	Intergenic	novelGene_23528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTTCCTTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	38505392	38505030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38505000_38505400
ES.28271.2	chr6	-	222	1	Intergenic	novelGene_23529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	38505393	38505171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38505200_38505400
ES.28272.1	chr6	+	170	1	Intergenic	novelGene_23530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGACTTATGTGCT	3922	False	NA	NA	False	NA	NA	NA	38505750	38505920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38505800_38505900
ES.28273.1	chr6	+	515	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	741	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTTTTTGTGTGCT	9893	False	NA	9	True	ATTAAA	-17	NA	38511721	38516384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38511946_38516093
ES.28274.1	chr6	-	183	1	Intergenic	novelGene_23531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38519559	38519376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38519400_38519600
ES.28275.1	chr6	-	395	1	Intergenic	novelGene_23532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACATTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	38521246	38520851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38520900_38521200
ES.28275.2	chr6	-	210	1	NIC	ENSMUSG00000081670.2	novel	2902	4	NA	NA	1711	-1851	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	38521298	38521088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38521100_38521300
ES.28276.1	chr6	-	190	1	Intergenic	novelGene_23533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTCTC	NA	False	NA	NA	False	NA	NA	NA	38523370	38523180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38523200_38523400
ES.28277.1	chr6	+	158	1	Intergenic	novelGene_23534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAATAAATTA	9633	False	NA	NA	False	NA	NA	NA	38523575	38523733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38523600_38523700
ES.28278.1	chr6	-	182	1	Intergenic	novelGene_23535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAAAACAAAACT	9533	False	NA	NA	False	NA	NA	NA	38524121	38523939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38523900_38524100
ES.28279.1	chr6	+	2304	1	Intergenic	novelGene_23536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCATTCTCGCGAGAC	NA	False	NA	NA	False	NA	NA	NA	38525913	38528217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38525900_38528200
ES.28279.2	chr6	+	285	1	Intergenic	novelGene_23537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTCTCCATTCCTAA	NA	False	NA	NA	False	NA	NA	NA	38526946	38527231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38526900_38527200
ES.2828.1	chr10	-	4661	9	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	349	907	intron_retention	FALSE	canonical	2	11	junction_8	14.6495520409329	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTATTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	59057320	58999034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
ES.2828.10	chr10	-	1987	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	349	196	349	-196	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTGAAAAAAAATA	NA	False	NA	NA	False	TTTAAA	-19	NA	59057320	59000137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.11	chr10	-	3493	9	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	351	-259	intron_retention	FALSE	canonical	2	11	junction_8	14.6495520409329	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGATATTATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	59057318	59000200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
ES.2828.12	chr10	-	2392	9	ISM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	366	1333	366	587	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCACAGTTGTCATCGG	NA	False	NA	NA	False	NA	NA	NA	59057303	59001274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.13	chr10	-	2274	9	ISM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	377	1440	377	480	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTTTTACTGTGCTTTG	NA	False	NA	NA	False	TATAAA	-12	NA	59057292	59001381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.14	chr10	-	890	1	Intergenic	novelGene_2153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTACGTAATAGAGTG	NA	False	NA	NA	False	NA	NA	NA	59038614	59037724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59037700_59038600
ES.2828.2	chr10	-	2213	10	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	349	18	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_9	15.7181973646809	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTTGAAATTGCTT	NA	False	NA	-11	True	AATAAA	-33	NA	59057320	58999923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
ES.2828.3	chr10	-	3572	8	NIC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	364	7	intron_retention	FALSE	canonical	0	0	junction_4	19.1790702249582	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTCCTAAAATGTGT	NA	False	NA	-22	True	AATAAA	-22	NA	59057305	58999934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.4	chr10	-	4037	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	60	22487	60	6	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057609	58999935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.5	chr10	-	2192	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	346	-6	346	6	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057323	58999935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.6	chr10	-	3755	9	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	354	6	intron_retention	FALSE	canonical	2	11	junction_8	14.6495520409329	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTTCCTAAAATGTG	NA	False	NA	-23	True	AATAAA	-21	NA	59057315	58999935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
ES.2828.7	chr10	-	3417	7	NIC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	364	4	intron_retention	FALSE	canonical	0	0	junction_6	19.7793382655291	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGTATTTCCTAAAATG	NA	False	NA	-25	True	AATAAA	-19	NA	59057305	58999937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59057212
ES.2828.8	chr10	-	3747	9	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	354	4	intron_retention	FALSE	canonical	0	0	junction_1	18.0688786315034	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGTATTTCCTAAAATG	NA	False	NA	-25	True	AATAAA	-19	NA	59057315	58999937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59002514_59006629_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ES.2828.9	chr10	-	3011	10	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	349	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9654021735255	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTATGTATTTCCTAAA	NA	False	NA	-28	True	AATAAA	-16	NA	59057320	58999940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59001582_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
ES.28280.1	chr6	+	1871	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-107	2489	24	-1162	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTTTCCACATTTTG	NA	False	NA	8	True	NA	NA	NA	38528292	38580813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.10	chr6	+	4320	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-11	3077	-11	26	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGCTCACACTTTTGTG	NA	False	NA	NA	False	AAAAAG	-31	NA	38528388	38583328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.11	chr6	+	3663	10	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-10	784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.8194602119119	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTAGGTGTTGAAAAG	NA	False	NA	5	True	AATAAA	-20	NA	38528389	38584086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38581900_38583313
ES.28280.12	chr6	+	5079	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-9	2316	-9	787	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGGTGTTGAAAAGTAT	NA	False	NA	8	True	AATAAA	-23	NA	38528390	38584089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.13	chr6	+	3402	2	FSM	ENSMUSG00000029823.17	ENSMUST00000160922.5	3448	2	-75	121	-9	10	multi-exon	FALSE	canonical	3	85	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGAAGCAGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	38528390	38534863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38531914
ES.28280.14	chr6	+	4626	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	9	junction_1	40.4505871403618	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGCTCAGCTGTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	38528391	38581974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38545781_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.15	chr6	+	2173	14	NIC	ENSMUSG00000029823.17	novel	2861	12	NA	NA	-8	-1162	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	57.2409006747725	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTTTCCACATTTTG	NA	False	NA	8	True	NA	NA	NA	38528391	38580813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38531914_38531999_38536138_38536240_38542589_38542658_38545781_38545853_38547444_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.16	chr6	+	3319	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-8	942	-8	385	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGCCCTTGCTGTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	38528391	38582360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.17	chr6	+	5177	10	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-8	839	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	49.3741072743174	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAATGTGTTTCTGTTTT	NA	False	NA	60	True	AATATA	-11	NA	38528391	38584141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38547444_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.18	chr6	+	5908	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-7	-45	intron_retention	FALSE	canonical	3	9	junction_1	40.4505871403618	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	38528392	38583257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38545781_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.19	chr6	+	5153	10	ISM	ENSMUSG00000029823.17	ENSMUST00000161227.8	2405	11	-345	2281	-7	779	5prime_fragment	FALSE	canonical	2	8	junction_2	39.0924829375447	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTCATTTTAGGTGTTG	NA	False	NA	0	True	AATAAA	-15	NA	38528392	38584081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38531914_38531999_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.2	chr6	+	2696	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-23	1	combination_of_known_junctions	FALSE	canonical	3	38	junction_8	38.4640660227179	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAGTAGTTAACAAACA	NA	False	NA	5	True	ATTAAA	-20	NA	38528376	38586406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.20	chr6	+	2660	10	FSM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-7	49	-7	-6	multi-exon	FALSE	canonical	3	38	junction_9	33.3603594142346	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38528392	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.21	chr6	+	3940	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-7	3453	-7	-9	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAAGGCTTATATAA	NA	False	NA	NA	False	NA	NA	NA	38528392	38582952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.22	chr6	+	5070	9	NNC	ENSMUSG00000029823.17	novel	4253	8	NA	NA	-1	771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.2787942017875	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGTTAATTCATTTT	NA	False	NA	-8	True	AATAAA	-7	NA	38528398	38584073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38547444_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570314_38570405_38580211
ES.28280.23	chr6	+	1796	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-1	5591	-1	-1161	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTTCCACATTTTGG	NA	False	NA	9	True	NA	NA	NA	38528398	38580814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.24	chr6	+	3908	15	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-1	322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3812679631026	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGAGTTTAGTTT	NA	False	NA	NA	False	AATATA	-18	NA	38528398	38582297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534234_38534316_38534786_38535011_38536138_38536240_38542589_38542658_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.25	chr6	+	7289	14	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	1	786	intron_retention	FALSE	canonical	0	0	junction_2	57.8401183430742	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGTGTTGAAAAGTA	NA	False	NA	7	True	AATAAA	-22	NA	38528400	38584088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534234_38534316_38534786_38535011_38536138_38536240_38542589_38542658_38545781_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.26	chr6	+	3418	10	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	1	392	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	49.8196748283246	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGCTGTGAAGTACTT	NA	False	NA	NA	False	ATTAAA	-26	NA	38528400	38582367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.27	chr6	+	1843	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	2	-296	combination_of_known_junctions	FALSE	canonical	3	38	junction_8	38.4640660227179	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCAGCAGCTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	38528401	38585578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.28	chr6	+	1772	3	NNC	ENSMUSG00000029823.17	novel	2846	3	NA	NA	2	-2761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	38528401	38543739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38533110_38543604
ES.28280.29	chr6	+	2780	12	NIC	ENSMUSG00000029823.17	novel	2405	11	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	51.9352744025939	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38528403	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38531914_38531999_38547444_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.3	chr6	+	3865	15	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-21	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.2578678148243	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAGTATTTCATATCT	NA	False	NA	1	True	ATTAAA	-13	NA	38528378	38582186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534234_38534316_38534786_38535011_38536138_38536240_38542589_38542658_38545781_38545853_38546866_38546945_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.30	chr6	+	5116	10	NIC	ENSMUSG00000029823.17	novel	2405	11	NA	NA	24	786	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	49.8196748283246	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGTGTTGAAAAGTA	NA	False	NA	7	True	AATAAA	-22	NA	38528423	38584088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.31	chr6	+	2621	9	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	50.2120503465055	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38528424	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570426_38580209_38580404_38585087
ES.28280.32	chr6	+	4772	14	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-12	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.4115170616531	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	38528436	38583257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534786_38535011_38536138_38536240_38545781_38545853_38546866_38546941_38547444_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.33	chr6	+	3457	9	NIC	ENSMUSG00000029823.17	novel	2861	12	NA	NA	-11	-1162	intron_retention	FALSE	canonical	0	0	junction_1	55.2685206514522	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTTTCCACATTTTG	NA	False	NA	8	True	NA	NA	NA	38528437	38580813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38542589_38542658_38545781_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.34	chr6	+	2133	10	FSM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	40	529	-9	2	multi-exon	FALSE	canonical	3	38	junction_9	33.3603594142346	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGATTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	38528439	38585876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.35	chr6	+	6175	10	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-2	780	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	50.0224640894493	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCATTTTAGGTGTTGA	NA	False	NA	1	True	AATAAA	-16	NA	38528446	38584082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38545781_38546941_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.36	chr6	+	5771	16	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	6	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.2229685172906	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTAGGTGTTGAAAA	NA	False	NA	4	True	AATAAA	-19	NA	38528454	38584085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534234_38534347_38534786_38535011_38536104_38536240_38539754_38539821_38542589_38542658_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.37	chr6	+	4205	16	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-3	-1165	intron_retention	FALSE	canonical	0	0	junction_2	58.3354285338012	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTGTTTTCCACATT	NA	False	NA	5	True	NA	NA	NA	38528462	38580810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38532172_38534234_38534316_38534786_38535011_38536138_38536240_38539784_38539821_38542589_38542658_38545781_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.38	chr6	+	3226	15	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-3	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.416665432501	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATTTCAGATGAATTGT	NA	False	NA	NA	False	AGTAAA	-10	NA	38528462	38586186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38532172_38534234_38534316_38534786_38535011_38536104_38536240_38542589_38542658_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.39	chr6	+	5039	9	FSM	ENSMUSG00000029823.17	ENSMUST00000163047.8	3141	9	215	-2113	18	786	multi-exon	FALSE	canonical	2	8	junction_2	44.0111846579935	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGTGTTGAAAAGTA	NA	False	NA	7	True	AATAAA	-22	NA	38528483	38584088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38531914_38531999_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.4	chr6	+	2613	15	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-20	-1165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3812679631026	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTGTTTTCCACATT	NA	False	NA	5	True	NA	NA	NA	38528379	38580810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38532172_38534234_38534316_38534786_38535011_38536138_38536240_38542589_38542658_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.40	chr6	+	2902	16	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	39	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.8350439625256	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACTGACTACCTAGTAG	NA	False	NA	-5	True	ATTAAA	-10	NA	38528816	38586396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38531914_38531999_38534786_38535011_38536138_38536240_38542589_38542658_38545781_38545853_38546866_38546945_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.41	chr6	+	3211	13	NNC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-289	-2	intron_retention	FALSE	canonical	1	2	junction_1	56.4842652623031	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAAACAGCAGTTTCTG	NA	False	NA	17	True	AATAAA	-19	NA	38534286	38586360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38535011_38536104_38536240_38542589_38542658_38545781_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.42	chr6	+	3776	1	NIC	ENSMUSG00000029823.17	novel	2861	12	NA	NA	-4294	18	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAACTAACATTTGTATT	7890	False	NA	51	True	NA	NA	NA	38542742	38546518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38542700_38546500
ES.28280.43	chr6	+	6000	7	NNC	ENSMUSG00000029823.17	novel	3906	8	NA	NA	-4278	-1166	intron_retention	FALSE	canonical	0	0	junction_5	49.7809088796989	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCCTGTTTTCCACAT	7906	False	NA	4	True	NA	NA	NA	38542758	38580809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570314_38570405_38580211
ES.28280.44	chr6	+	6348	9	NIC	ENSMUSG00000029823.17	novel	2419	13	NA	NA	-3716	-8	intron_retention	FALSE	canonical	3	8	junction_1	54.8515040814744	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACATACTGAAACAGCAG	8468	False	NA	11	True	AATAAA	-13	NA	38543320	38586354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.45	chr6	+	7943	1	NIC	ENSMUSG00000029823.17	novel	3141	9	NA	NA	-2654	5825	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGACTGGGCTTCAG	9530	False	NA	NA	False	NA	NA	NA	38544382	38552325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38544400_38552300
ES.28280.46	chr6	+	6359	8	NNC	ENSMUSG00000029823.17	novel	3906	8	NA	NA	-2114	0	intron_retention	FALSE	canonical	0	0	junction_1	45.7410635857889	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGTGAGAAGGAAGGT	NA	False	NA	NA	False	AAAAAG	-5	NA	38544922	38583302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38547540_38561977_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.47	chr6	+	3794	7	ISM	ENSMUSG00000029823.17	ENSMUST00000163047.8	3141	9	16699	1165	-2069	-1165	3prime_fragment	FALSE	canonical	3	61	junction_6	27.3901847788988	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCCTGTTTTCCACATT	NA	False	NA	5	True	NA	NA	NA	38544967	38580810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.48	chr6	+	2198	9	ISM	ENSMUSG00000029823.17	ENSMUST00000162386.8	2861	12	17385	47	-1203	-6	3prime_fragment	FALSE	canonical	3	6	junction_1	49.1445571757443	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38545833	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38545853_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.49	chr6	+	3643	9	ISM	ENSMUSG00000029823.17	ENSMUST00000161227.8	2405	11	17282	-3	-1017	3	3prime_fragment	FALSE	canonical	3	38	junction_8	31.7881168835148	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCAGTTTCTGCATTA	NA	False	NA	22	True	AATAAA	-24	NA	38546019	38586365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.5	chr6	+	3356	9	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	-20	4050	-20	380	5prime_fragment	FALSE	canonical	3	65	junction_1	24.3567239176372	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTTTCTTGCCCTTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	38528379	38582355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.50	chr6	+	2449	9	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-786	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.5272203866391	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38546250	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087_38585274_38586197
ES.28280.51	chr6	+	3254	8	ISM	ENSMUSG00000029823.17	ENSMUST00000162386.8	2861	12	17969	-1	-619	1	3prime_fragment	FALSE	canonical	3	38	junction_7	38.2062074238505	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACCTAGTAGTTAACAAA	NA	False	NA	3	True	ATTAAA	-18	NA	38546417	38586404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
ES.28280.52	chr6	+	2962	10	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-298	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	51.5991195254577	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	NA	False	NA	13	True	AATAAA	-15	NA	38546738	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38547540_38547976_38548024_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ES.28280.53	chr6	+	3058	7	ISM	ENSMUSG00000029823.17	ENSMUST00000163047.8	3141	9	18620	-20	-148	20	3prime_fragment	FALSE	canonical	3	61	junction_6	27.3901847788988	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGTTTATCTTACTT	NA	False	NA	NA	False	AATAAA	-43	NA	38546888	38581995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.54	chr6	+	177	1	Intergenic	novelGene_23541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAGTAA	727	False	NA	NA	False	NA	NA	NA	38559682	38559859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38559700_38559900
ES.28280.55	chr6	+	4173	4	ISM	ENSMUSG00000029823.17	ENSMUST00000160430.3	3906	8	22515	-1122	22515	781	3prime_fragment	FALSE	canonical	3	96	junction_2	20.8859335970941	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATTTTAGGTGTTGAA	2022	False	NA	2	True	AATAAA	-17	NA	38569551	38584083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.56	chr6	+	1820	4	ISM	ENSMUSG00000029823.17	ENSMUST00000160430.3	3906	8	22599	1147	22599	-161	3prime_fragment	FALSE	canonical	3	96	junction_2	20.8859335970941	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTGTAGGCTTCTTA	2106	False	NA	NA	False	ATTAAA	-10	NA	38569635	38581814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.57	chr6	+	2221	1	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	37099	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACTGAAACAGCAGTT	2150	False	NA	13	True	AATAAA	-15	NA	38584135	38586356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38584100_38586400
ES.28280.6	chr6	+	4994	8	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-20	786	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.7410635857889	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGTGTTGAAAAGTA	NA	False	NA	7	True	AATAAA	-22	NA	38528379	38584088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_38528844_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ES.28280.7	chr6	+	5118	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-20	-845	-20	845	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCTGTTTTGTTTTT	NA	False	NA	66	True	AATATA	-17	NA	38528379	38584147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.8	chr6	+	3160	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	-18	1111	-18	216	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTTCATATCTTTGAA	NA	False	NA	6	True	ATTAAA	-18	NA	38528381	38582191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ES.28280.9	chr6	+	3190	9	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	-12	220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.1161464205567	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATCTTTGAATTCA	NA	False	NA	10	True	ATTAAA	-22	NA	38528387	38582195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569551_38569731_38570312_38570405_38575719_38575750_38580211
ES.28281.1	chr6	-	169	1	Antisense	novelGene_ENSMUSG00000029823.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAACAAA	637	False	NA	NA	False	NA	NA	NA	38533017	38532848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_38532800_38533000
ES.28282.1	chr6	-	163	1	Intergenic	novelGene_23538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38535536	38535373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38535400_38535500
ES.28283.1	chr6	-	4017	1	Intergenic	novelGene_23539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAATAAATAAATAAAGGC	NA	False	NA	NA	False	NA	NA	NA	38541152	38537135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38537100_38541200
ES.28283.2	chr6	-	3011	1	Intergenic	novelGene_23540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAACTCAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	38541153	38538142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38538100_38541200
ES.28284.1	chr6	-	3145	2	Antisense	novelGene_ENSMUSG00000029823.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAATCCCCCTAAT	3979	False	NA	NA	False	NA	NA	NA	38548030	38544448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_38547540_38547976
ES.28285.1	chr6	-	173	1	Intergenic	novelGene_23542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38575215	38575042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38575000_38575200
ES.28286.1	chr6	+	5466	1	Intergenic	novelGene_23543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAGCAGTTACCCAG	1903	False	NA	NA	False	NA	NA	NA	38587717	38593183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38587700_38593200
ES.28286.2	chr6	+	3726	1	Intergenic	novelGene_23545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAACAGTACTCTACATA	4089	False	NA	NA	False	NA	NA	NA	38589903	38593629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38589900_38593600
ES.28287.1	chr6	-	3585	1	Intergenic	novelGene_23544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38591639	38588054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38588100_38591600
ES.28288.1	chr6	-	4448	5	NNC	ENSMUSG00000071537.7	novel	3413	6	NA	NA	70	6847	intron_retention	FALSE	canonical	0	0	junction_1	7.88590514779375	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTCTCTCGTGAGTT	NA	False	NA	NA	False	NA	NA	NA	38614098	38595780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38599089_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ES.28288.2	chr6	-	2342	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	600	-666	600	-301	multi-exon	TRUE	canonical	3	11	junction_3	4.14578098794425	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGAGCTTGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	38613568	38602928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ES.28288.3	chr6	-	2300	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	-24	0	-15	0	multi-exon	FALSE	canonical	3	11	junction_3	4.14578098794425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTGTCCCAGAGGT	NA	False	NA	NA	False	AATAAA	-45	NA	38614192	38603594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ES.28288.4	chr6	-	1784	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	75	417	75	184	multi-exon	FALSE	canonical	3	11	junction_3	4.14578098794425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTCAAGAGACTCTAT	NA	False	NA	NA	False	NA	NA	NA	38614093	38604011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ES.28289.1	chr6	+	257	1	Intergenic	novelGene_23546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTTACTATGGGATA	9883	False	NA	NA	False	TATAAA	-27	NA	38620999	38621256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38621000_38621300
ES.2829.1	chr10	+	205	1	Intergenic	novelGene_2154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTGCACGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	59102775	59102980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59102800_59103000
ES.28290.1	chr6	+	1453	5	FSM	ENSMUSG00000079598.5	ENSMUST00000114874.5	1431	5	-30	8	-30	-8	multi-exon	FALSE	canonical	0	0	junction_1	2.12132034355964	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGAGTCTGCTGGCAT	NA	False	NA	NA	False	AATAAA	-12	NA	38639971	38657792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_38640352_38650377_38650453_38653731_38653899_38654443_38654545_38657062
ES.28291.1	chr6	-	172	1	Intergenic	novelGene_23547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATTTGAGGAA	NA	False	NA	NA	False	NA	NA	NA	38647901	38647729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38647700_38647900
ES.28292.1	chr6	+	390	1	Intergenic	novelGene_23548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	38661783	38662173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38661800_38662200
ES.28293.1	chr6	+	4992	1	Intergenic	novelGene_23555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	38835544	38840536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_38835500_38840500
ES.28294.1	chr6	-	1668	2	Intergenic	novelGene_23549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCCAGCCGCTTCC	NA	False	NA	-2	True	ATTAAA	-17	NA	38667946	38664448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38665071_38666900
ES.28294.10	chr6	-	6772	15	FSM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-266	-2639	-24	-855	multi-exon	FALSE	canonical	2	8	junction_4	5.22601420681153	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTGTTTTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	38853123	38672179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.11	chr6	-	5230	15	FSM	ENSMUSG00000061436.16	ENSMUST00000161779.8	7684	15	-343	2797	-343	693	multi-exon	FALSE	canonical	2	8	junction_4	5.39131955374677	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTGGTAGTCCAGGTG	NA	False	NA	NA	False	NA	NA	NA	38853442	38674121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.12	chr6	-	4015	14	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	56999	-663	-577	659	3prime_fragment	FALSE	canonical	2	8	junction_4	5.05941035458626	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGCACAAAGTGATTTA	NA	False	NA	NA	False	AATAGA	-14	NA	38795858	38674155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ES.28294.13	chr6	-	4747	15	FSM	ENSMUSG00000061436.16	ENSMUST00000161779.8	7684	15	-56	2993	-56	497	multi-exon	FALSE	canonical	2	8	junction_4	5.39131955374677	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTTTCTTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	38853155	38674317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.14	chr6	-	4543	15	FSM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-175	-501	67	497	multi-exon	FALSE	canonical	2	8	junction_4	5.22601420681153	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTTTCTTTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	38853032	38674317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.17	chr6	-	4439	15	FSM	ENSMUSG00000061436.16	ENSMUST00000160360.2	3907	15	-269	-263	-75	254	multi-exon	FALSE	canonical	0	0	junction_6	6.33785195053803	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCCAAAAGGGCCAACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	38853174	38674560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.18	chr6	-	4228	15	FSM	ENSMUSG00000061436.16	ENSMUST00000161779.8	7684	15	-31	3487	-31	3	multi-exon	FALSE	canonical	2	8	junction_4	5.39131955374677	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAGTAACAAAAGAGGAC	NA	False	NA	NA	False	AAAAAG	-27	NA	38853130	38674811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.19	chr6	-	13414	12	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-111	7495	-63	-7490	5prime_fragment	FALSE	canonical	2	8	junction_1	5.64661823755256	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38852968	38682313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.2	chr6	-	2944	2	NNC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	48506	6876	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCCAGCCGCTTCC	NA	False	NA	-2	True	ATTAAA	-17	NA	38671689	38664448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38665977_38670273
ES.28294.20	chr6	-	171	1	Intergenic	novelGene_23551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGCCAGAGCGAGCGG	9958	False	NA	NA	False	NA	NA	NA	38685497	38685326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38685300_38685500
ES.28294.21	chr6	-	5409	13	NNC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	-42	-15890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.99435564771935	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTTCTGGAAATTGT	NA	False	NA	NA	False	AGTAAA	-12	NA	38853141	38690713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38781065_38781207_38795164_38796249_38852732
ES.28294.22	chr6	-	3897	12	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	-283	17184	-41	-17179	5prime_fragment	FALSE	canonical	2	8	junction_1	5.64661823755256	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATGCTTGCAGTCA	NA	False	NA	NA	False	NA	NA	NA	38853140	38692002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28294.23	chr6	-	1822	1	Intergenic	novelGene_23552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATGTAAAGTGCAGT	2665	False	NA	NA	False	AATAAA	-22	NA	38743088	38741266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38741300_38743100
ES.28294.24	chr6	-	5824	1	Intergenic	novelGene_23553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACATCTCCAATAGGTA	NA	False	NA	NA	False	NA	NA	NA	38765871	38760047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38760000_38765900
ES.28294.25	chr6	-	5604	1	Intergenic	novelGene_23554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAGACTAAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	38790729	38785125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38785100_38790700
ES.28294.26	chr6	-	1885	2	ISM	ENSMUSG00000061436.16	ENSMUST00000160360.2	3907	15	-309	120022	-115	-4	5prime_fragment	FALSE	canonical	3	22	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAGAGACTTTT	NA	False	NA	NA	False	NA	NA	NA	38853214	38794845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38796249_38852732
ES.28294.27	chr6	-	6627	1	Genic_Genomic	ENSMUSG00000061436.16	novel	NA	NA	NA	NA	-74	-51705	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAATCTGACTTAATAG	NA	False	NA	NA	False	NA	NA	NA	38853173	38846546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_38846500_38853200
ES.28294.3	chr6	-	4783	2	NNC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	46661	6875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTGTCCAGCCGCTTC	NA	False	NA	-3	True	ATTAAA	-16	NA	38673534	38664449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38666011_38670312
ES.28294.4	chr6	-	3478	2	NNC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	47959	6874	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGTCCAGCCGCTT	NA	False	NA	-4	True	ATTAAA	-15	NA	38672236	38664450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38665979_38670286
ES.28294.5	chr6	-	1680	1	Intergenic	novelGene_23550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAACTTTGTCCAGCCGC	NA	False	NA	-6	True	ATTAAA	-13	NA	38666132	38664452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38664500_38666100
ES.28294.6	chr6	-	4510	2	NNC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	46925	6872	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAACTTTGTCCAGCCGC	NA	False	NA	-6	True	ATTAAA	-13	NA	38673270	38664452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_38665976_38670283
ES.28294.7	chr6	-	8120	1	Genic_Genomic	ENSMUSG00000061436.16	novel	NA	NA	NA	NA	45753	5002	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTCTGCTGTCTTCTCTT	NA	False	NA	NA	False	AATAAA	-3	NA	38674442	38666322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_38666300_38674400
ES.28294.8	chr6	-	6421	14	ISM	ENSMUSG00000061436.16	ENSMUST00000162359.8	3867	15	56723	-2793	-853	-701	3prime_fragment	FALSE	canonical	2	8	junction_4	5.05941035458626	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGGAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	38796134	38672025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ES.28294.9	chr6	-	6987	15	NIC	ENSMUSG00000061436.16	novel	7684	15	NA	NA	-122	-816	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	6.44323723934242	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCTGTGTGTATATGA	NA	False	NA	NA	False	TTTAAA	-10	NA	38853221	38672140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ES.28295.1	chr6	-	170	1	Intergenic	novelGene_23556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAACAACCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	38864066	38863896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_38863900_38864100
ES.28296.1	chr6	-	3786	3	Antisense	novelGene_ENSMUSG00000029925.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTCTGTTTCTGGAA	NA	False	NA	NA	False	AATAAA	-19	NA	38972948	38962854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_38966312_38967960_38968143_38972801
ES.28297.1	chr6	-	3701	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	-466	-4	-466	4	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGAGTTTATTTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	39095749	39063339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
ES.28297.2	chr6	-	5620	12	NNC	ENSMUSG00000038507.7	novel	3231	12	NA	NA	-467	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.50076117002829	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAGACTGGAGTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	39095750	39063346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39069217_39069538_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
ES.28297.3	chr6	-	2883	3	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	26647	4	-609	-4	intron_retention	FALSE	canonical	3	23	junction_2	6.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGAAGACTGGAGTTTA	9494	False	NA	NA	False	AATAAA	-15	NA	39068636	39063347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39064575_39065911_39066064_39067132
ES.28297.4	chr6	-	178	1	Intergenic	novelGene_23557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGGCT	2596	False	NA	NA	False	NA	NA	NA	39086417	39086239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39086200_39086400
ES.28298.1	chr6	+	171	1	Intergenic	novelGene_23558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	39173167	39173338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39173200_39173300
ES.28299.1	chr6	+	2892	2	Antisense	novelGene_ENSMUSG00000042599.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATAGGATTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	39175996	39179958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_39178687_39179756
ES.283.1	chr1	+	175	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATCTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36583553	36583728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36583600_36583700
ES.2830.1	chr10	-	174	1	Intergenic	novelGene_2155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	59114991	59114817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59114800_59115000
ES.28300.1	chr6	-	4898	1	Genic_Genomic	ENSMUSG00000042599.9	novel	NA	NA	NA	NA	13169	7	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTTGTTGTTCCCTTTT	NA	False	NA	99	True	TATAAA	-40	NA	39118447	39113549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_39113500_39118400
ES.28300.10	chr6	-	6126	19	NIC	ENSMUSG00000042599.9	novel	9566	20	NA	NA	27	2235	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	6.03206452793203	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39183696	39116808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39152296_39152415_39158461_39158548_39183374
ES.28300.11	chr6	-	4204	20	FSM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	12	5350	12	137	multi-exon	FALSE	canonical	3	12	junction_10	4.65544092368336	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAATGGGTGCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	39183711	39118906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
ES.28300.12	chr6	-	3853	20	FSM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	-43	5756	-43	-269	multi-exon	FALSE	canonical	3	12	junction_10	4.65544092368336	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGGTTTTCTTCTAC	NA	False	NA	NA	False	CATAAA	-27	NA	39183766	39119312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
ES.28300.2	chr6	-	7360	6	ISM	ENSMUSG00000042599.9	ENSMUST00000127036.2	3077	11	6913	-5386	6913	-101	3prime_fragment	FALSE	canonical	3	14	junction_3	2.33238075793812	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTAGCACTCAGTGT	NA	False	NA	-9	True	ATTAAA	-21	NA	39124703	39113657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637
ES.28300.5	chr6	-	6202	20	NNC	ENSMUSG00000042599.9	novel	9566	20	NA	NA	111	2270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.1845479003105	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTAGCCTGGCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	39183612	39116773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147089_39147245_39147702_39147845_39150215_39150373_39152296_39152415_39158461_39158548_39183374
ES.28300.6	chr6	-	3997	1	NIC	ENSMUSG00000042599.9	novel	9566	20	NA	NA	10841	2265	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATTCTAGCCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	39120775	39116778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39116800_39120800
ES.28300.7	chr6	-	8613	13	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	36532	3250	-15575	2237	intron_retention	FALSE	canonical	3	12	junction_10	4.67484402591858	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39147191	39116806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600
ES.28300.9	chr6	-	6203	21	NNC	ENSMUSG00000042599.9	novel	9566	20	NA	NA	-31	2237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	6.12760148834762	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39183754	39116806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374_39183540_39183683
ES.28301.1	chr6	+	2094	1	FSM	ENSMUSG00000115026.2	ENSMUST00000227758.2	544	1	-131	-1419	-131	1419	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39183870	39185964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_39183900_39186000
ES.28302.1	chr6	-	176	1	Intergenic	novelGene_23559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTTAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39215576	39215400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39215400_39215600
ES.28303.1	chr6	+	178	1	Intergenic	novelGene_23562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACTC	NA	False	NA	NA	False	NA	NA	NA	39271578	39271756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39271600_39271800
ES.28304.1	chr6	+	380	1	Intergenic	novelGene_23565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	39296650	39297030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39296600_39297000
ES.28305.1	chr6	+	5679	1	Intergenic	novelGene_23567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	39304933	39310612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39304900_39310600
ES.28306.1	chr6	+	175	2	Antisense	novelGene_ENSMUSG00000029924.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	238	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	39342765	39345839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_39342784_39345682
ES.28306.2	chr6	+	175	2	Intergenic	novelGene_23568	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	277	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	39343185	39368941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39343202_39368782
ES.28306.3	chr6	+	209	1	Intergenic	novelGene_23570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATGCATTCCACCTC	NA	False	NA	NA	False	NA	NA	NA	39345661	39345870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39345700_39345900
ES.28306.4	chr6	+	269	1	Intergenic	novelGene_23571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCATTTCTGTTTCTTTA	NA	False	NA	14	True	NA	NA	NA	39351951	39352220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39352000_39352200
ES.28306.5	chr6	+	178	2	Intergenic	novelGene_23573	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTACACTTTTAAGC	NA	False	NA	NA	False	NA	NA	NA	39368763	39374345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39368925_39374328
ES.28306.6	chr6	+	375	1	Intergenic	novelGene_23574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACATCTGAAACATTAAA	NA	False	NA	NA	False	NA	NA	NA	39368764	39369139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39368800_39369100
ES.28306.7	chr6	+	130	1	Intergenic	novelGene_23575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39374175	39374305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39374200_39374300
ES.28307.1	chr6	-	2676	3	Intergenic	novelGene_23560	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGGGCAGAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	39246135	39240273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39242736_39243266_39243444_39246098
ES.28307.10	chr6	-	4701	16	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	8	intron_retention	FALSE	canonical	3	23	junction_13	113.737631806227	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTAAGTGTGTCTGTC	NA	False	NA	0	True	AATAAA	-24	NA	39354624	39311698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.11	chr6	-	3966	15	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	101.851858207929	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354607	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
ES.28307.12	chr6	-	4309	17	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	104.321000252825	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354600	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314364_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
ES.28307.13	chr6	-	4036	16	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	104.154671309335	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354618	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
ES.28307.14	chr6	-	3976	15	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.1181508055884	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354617	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314154_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.15	chr6	-	4311	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	99.4312546157579	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354624	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.16	chr6	-	4240	16	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-35	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	93.1108300181384	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354644	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39351928_39352101_39354552
ES.28307.17	chr6	-	4582	20	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	118.093840333244	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354599	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39348139_39348264_39349012_39349072_39349780_39349862_39351928_39352101_39354552
ES.28307.18	chr6	-	4167	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354620	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
ES.28307.19	chr6	-	3881	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	3	-1215	3	3	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354603	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.2	chr6	-	2086	15	NNC	ENSMUSG00000029924.13	novel	707	4	NA	NA	-9464	69419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.495656017979	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCACAGGAGTGCTGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	39334384	39242287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39242736_39243266_39243444_39247521_39247634_39271778_39271883_39272845_39273023_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333
ES.28307.20	chr6	-	4080	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-47	-3	-47	3	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354656	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.21	chr6	-	4060	16	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.6382210537314	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354579	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39352105_39352163_39354552
ES.28307.23	chr6	-	4863	19	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	110.813727032193	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354620	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39351928_39352101_39354168
ES.28307.24	chr6	-	4113	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCCCTTAAGTGTGT	NA	False	NA	-5	True	AATAAA	-19	NA	39354608	39311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
ES.28307.25	chr6	-	4185	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354624	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
ES.28307.26	chr6	-	4601	19	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	112.918480920234	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354613	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351254_39351448_39351928_39352163_39354552
ES.28307.27	chr6	-	4357	18	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	104.459525116397	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354624	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351928_39352101_39354552
ES.28307.28	chr6	-	5032	15	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_5	98.7924282399771	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354603	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39322277_39322828_39322931_39324222_39324365_39325868_39325987_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.29	chr6	-	4228	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_15	95.9488592623696	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354603	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349780_39349862_39354552
ES.28307.3	chr6	-	178	1	Intergenic	novelGene_23561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTCATCTGT	NA	False	NA	NA	False	NA	NA	NA	39258549	39258371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39258400_39258500
ES.28307.30	chr6	-	4088	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	86.9013744936689	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354608	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39354552
ES.28307.32	chr6	-	4180	17	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_16	115.460068178353	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354593	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351928_39352101_39354552
ES.28307.34	chr6	-	4435	19	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	112.821173916737	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354624	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351254_39351448_39352105_39352163_39354552
ES.28307.35	chr6	-	3781	13	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	82.0127022682056	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354603	39311706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.36	chr6	-	3939	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-19	-1	combination_of_known_splicesites	TRUE	canonical	1	7	junction_12	72.3018819269424	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTTTGCCCTTAAGT	NA	False	NA	-9	True	AATAAA	-15	NA	39354628	39311707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39343822_39343981_39354552
ES.28307.37	chr6	-	3995	15	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_14	102.741601772086	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTTTGCCCTTAAGT	NA	False	NA	-9	True	AATAAA	-15	NA	39354598	39311707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
ES.28307.39	chr6	-	2836	6	NNC	ENSMUSG00000029924.13	novel	2071	7	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	103.673718945546	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATTTTGCCCTTAAG	NA	False	NA	-10	True	AATAAA	-14	NA	39354599	39311708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322849_39354559
ES.28307.4	chr6	-	1835	16	NNC	ENSMUSG00000029924.13	novel	771	8	NA	NA	-19	47228	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	95.7210298500573	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATTTTCATGAATATG	NA	False	NA	NA	False	NA	NA	NA	39354628	39264478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39264673_39271778_39271883_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.40	chr6	-	4147	17	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	111.003079208417	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATTTTGCCCTTAAG	NA	False	NA	-10	True	AATAAA	-14	NA	39354611	39311708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.41	chr6	-	4329	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	149	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	88.0172710324513	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATTTTGCCCTTAAG	NA	False	NA	-10	True	AATAAA	-14	NA	39354403	39311708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354168
ES.28307.43	chr6	-	4343	15	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	72.3460011165166	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAACATTTTGCCCTTAA	NA	False	NA	-11	True	AATAAA	-13	NA	39354541	39311709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354168
ES.28307.44	chr6	-	3288	19	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	119.269173730973	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTCTCACTTTCCCT	NA	False	NA	11	True	AATAAA	-44	NA	39354596	39312900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314364_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39352105_39352163_39354552
ES.28307.45	chr6	-	3391	16	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-11	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	93.5984330353167	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAGCTTGACATTGCCT	NA	False	NA	-1	True	AATAAA	-32	NA	39354620	39312912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39351928_39352101_39354168
ES.28307.46	chr6	-	2943	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTTAAGCTTGACATT	NA	False	NA	-5	True	AATAAA	-28	NA	39354609	39312916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
ES.28307.47	chr6	-	3486	18	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	106.279614232383	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGCTTAAGCTTGACAT	NA	False	NA	-6	True	AATAAA	-27	NA	39354559	39312917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351254_39351448_39354168
ES.28307.48	chr6	-	3176	18	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	104.459525116397	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354655	39312918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351928_39352101_39354552
ES.28307.49	chr6	-	3070	17	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_16	102.598732935646	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354608	39312918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39351928_39352101_39354552
ES.28307.5	chr6	-	177	1	Intergenic	novelGene_23563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTTACAAT	NA	False	NA	NA	False	NA	NA	NA	39277558	39277381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39277400_39277600
ES.28307.50	chr6	-	3192	19	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	112.821173916737	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354593	39312918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39351254_39351448_39352105_39352163_39354552
ES.28307.51	chr6	-	2863	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-46	1213	-46	0	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354655	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.52	chr6	-	5861	13	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	160	junction_12	41.0456216368513	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354603	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.53	chr6	-	2691	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-23	1	-20	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354629	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.55	chr6	-	2858	15	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.421670800698	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354600	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39328782_39328979_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.56	chr6	-	3124	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	99.4312546157579	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354653	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.57	chr6	-	4174	8	ISM	ENSMUSG00000029924.13	ENSMUST00000200961.4	2878	16	20695	-3	-4249	0	3prime_fragment	FALSE	canonical	3	242	junction_2	19.5813322179205	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39329169	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983
ES.28307.58	chr6	-	2972	17	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354624	39312919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
ES.28307.6	chr6	-	176	1	Intergenic	novelGene_23564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATATATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39288260	39288084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39288100_39288300
ES.28307.60	chr6	-	4268	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_13	39.9511536073267	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCCTGCTTAAGCTTG	NA	False	NA	-10	True	AATAAA	-23	NA	39354598	39312921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.61	chr6	-	2970	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-31	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	94.08804387381	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCCTGCTTAAGCTTG	NA	False	NA	-10	True	AATAAA	-23	NA	39354640	39312921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39348139_39348264_39354552
ES.28307.62	chr6	-	2833	16	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5646145576675	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCCCTGCTTAAGCTT	NA	False	NA	-11	True	AATAAA	-22	NA	39354586	39312922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314154_39314256_39314364_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.63	chr6	-	3240	19	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_18	110.518586783814	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTCCCTGCTTAAGCT	NA	False	NA	-12	True	AATAAA	-21	NA	39354601	39312923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39351928_39352101_39354552
ES.28307.64	chr6	-	3518	20	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.925906410973	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTCCCTGCTTAAGCT	NA	False	NA	-12	True	AATAAA	-21	NA	39354624	39312923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39351254_39351448_39351928_39352163_39354552
ES.28307.65	chr6	-	3387	2	ISM	ENSMUSG00000029924.13	ENSMUST00000202714.4	2071	7	7145	5	6509	-2	3prime_fragment	FALSE	canonical	3	248	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGTCCCTGCTTAAGC	NA	False	NA	-13	True	AATAAA	-20	NA	39317775	39312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39314219_39315682
ES.28307.66	chr6	-	2985	18	NNC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-15	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	103.771841824791	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTTCAGTCACTGA	NA	False	NA	-114	True	NA	NA	NA	39354624	39313025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343977_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.67	chr6	-	2695	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	-199	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACGTTGGGTTAGGAA	NA	False	NA	NA	False	TTTAAA	-44	NA	39354608	39313121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
ES.28307.68	chr6	-	2791	18	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-8	-294	combination_of_known_junctions	FALSE	canonical	3	23	junction_15	99.4312546157579	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTCTATAAGAATCAAT	NA	False	NA	NA	False	NA	NA	NA	39354617	39313216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.69	chr6	-	2528	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-5	291	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	97.9791669681025	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354586	39320552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354168
ES.28307.7	chr6	-	1626	2	Intergenic	novelGene_23566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTAGGGTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	39302469	39299988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39301191_39302045
ES.28307.70	chr6	-	4162	13	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	291	intron_retention	FALSE	canonical	1	1	junction_4	124.553508135616	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACTGTATAATTAAA	NA	False	NA	1	True	AATAAA	-19	NA	39354596	39320552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39321339_39322228_39322277_39322828_39324365_39324658_39324802_39326273_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
ES.28307.71	chr6	-	2143	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	290	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	93.2216928813709	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGACTGTATAATTAA	NA	False	NA	0	True	AATAAA	-18	NA	39354608	39320553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39354552
ES.28307.72	chr6	-	2337	15	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	1	290	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	109.152860424157	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGACTGTATAATTAA	NA	False	NA	0	True	AATAAA	-18	NA	39354608	39320553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39351928_39352101_39354552
ES.28307.73	chr6	-	2160	14	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-5	290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	106.407333911057	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGACTGTATAATTAA	NA	False	NA	0	True	AATAAA	-18	NA	39354601	39320553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336979_39341436_39341546_39343822_39343981_39349780_39349862_39354552
ES.28307.74	chr6	-	2097	13	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	-12	8847	-12	290	5prime_fragment	FALSE	canonical	3	160	junction_12	41.2501683498248	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGACTGTATAATTAA	NA	False	NA	0	True	AATAAA	-18	NA	39354621	39320553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.75	chr6	-	2243	15	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-19	289	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	95.3788364836749	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGACTGTATAATTA	NA	False	NA	-1	True	AATAAA	-17	NA	39354628	39320554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
ES.28307.76	chr6	-	2199	14	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	3	287	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	91.6373738385364	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATATTTGACTGTATAAT	NA	False	NA	-3	True	AATAAA	-15	NA	39354603	39320556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
ES.28307.77	chr6	-	1942	12	ISM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-11	7640	-8	285	5prime_fragment	FALSE	canonical	3	31	junction_7	79.0636316598199	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATATTTGACTGTATA	NA	False	NA	-5	True	AATAAA	-13	NA	39354617	39320558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.78	chr6	-	2317	16	NIC	ENSMUSG00000029924.13	novel	2878	16	NA	NA	-2	285	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	105.108071367839	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATATTTGACTGTATA	NA	False	NA	-5	True	AATAAA	-13	NA	39354583	39320558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ES.28307.79	chr6	-	204	1	Intergenic	novelGene_23569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCTCTAGAAAGAAGAAA	3236	False	NA	NA	False	NA	NA	NA	39344194	39343990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39344000_39344200
ES.28307.8	chr6	-	4442	13	NIC	ENSMUSG00000029924.13	novel	2669	14	NA	NA	-4	15	intron_retention	FALSE	canonical	3	31	junction_8	74.5525541704195	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCTGTCCTGGAAT	NA	False	NA	7	True	AATAAA	-31	NA	39354600	39311691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28307.9	chr6	-	4172	15	NNC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	-20	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.421670800698	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTCTGTCCTGGAA	NA	False	NA	6	True	AATAAA	-30	NA	39354629	39311692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39328782_39329037_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ES.28308.1	chr6	-	175	1	Intergenic	novelGene_23572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAATGCACAG	NA	False	NA	NA	False	NA	NA	NA	39355238	39355063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39355100_39355200
ES.28309.1	chr6	+	270	1	Intergenic	novelGene_23576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCACAAGGCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	39379917	39380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39379900_39380200
ES.2831.1	chr10	-	178	1	Intergenic	novelGene_2156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAGAAGTGTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	59117213	59117035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59117000_59117200
ES.28310.1	chr6	+	178	1	Intergenic	novelGene_23578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCCTCTCTAATTACAT	3567	False	NA	NA	False	TTTAAA	-6	NA	39384965	39385143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39385000_39385100
ES.28311.1	chr6	+	119	1	Intergenic	novelGene_23579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	504	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGAACTAGCTGAATG	7780	False	NA	NA	False	NA	NA	NA	39389178	39389297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39389200_39389300
ES.28312.1	chr6	+	919	1	Genic_Genomic	ENSMUSG00000068601.3	novel	NA	NA	NA	NA	-5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTAGTGTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	39397306	39398225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_39397300_39398200
ES.28313.1	chr6	-	3242	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	-196	0	-196	0	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397592	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.10	chr6	-	3284	8	FSM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	-292	0	-1	0	multi-exon	FALSE	canonical	3	27	junction_7	1191.73940789358	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397002	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396400
ES.28313.11	chr6	-	4186	3	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	16966	0	1920	0	intron_retention	FALSE	canonical	3	1457	junction_1	58	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39379744	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39376369_39376731_39376871_39377328
ES.28313.12	chr6	-	5063	5	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	1457	junction_1	1289.90258837635	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397395	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.13	chr6	-	2964	8	NNC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_7	1321.06530914274	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39396978	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396572
ES.28313.14	chr6	-	2969	8	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	1434.25577657999	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397386	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377395_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.15	chr6	-	2764	8	NNC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	157	junction_7	1296.15703571153	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39396979	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ES.28313.16	chr6	-	3740	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	10	0	intron_retention	FALSE	canonical	3	1457	junction_1	1230.48143243023	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397386	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.17	chr6	-	2960	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1446.53851434014	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397361	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378308_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.2	chr6	-	2953	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-134	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1528.48450724529	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397530	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39397032
ES.28313.20	chr6	-	2876	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	1582.52429455511	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397371	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382664_39382895_39387021_39387151_39397032
ES.28313.22	chr6	-	3043	3	ISM	ENSMUSG00000029922.16	ENSMUST00000150575.2	773	5	2996	-1339	2996	0	intron_retention	FALSE	canonical	3	14	junction_2	721.5	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39378668	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39376369_39376731_39376871_39377395
ES.28313.23	chr6	-	2899	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1436.90968003261	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397360	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381698_39382664_39382895_39387021_39387151_39397032
ES.28313.24	chr6	-	3481	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	21	-2	intron_retention	FALSE	canonical	3	1453	junction_2	1245.78404584779	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGTCTTGTGTGATGAC	NA	False	NA	2	True	AATAAA	-22	NA	39397375	39374739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.25	chr6	-	2864	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-8	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1430.04803686978	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397240	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377430_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.27	chr6	-	2579	6	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	9	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1660.48973498784	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397387	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39382664_39382895_39387021_39387151_39397032
ES.28313.28	chr6	-	3987	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	12	-16	intron_retention	FALSE	canonical	0	0	junction_4	1617.54608804163	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397384	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39378785_39378899_39381581_39382895_39387021_39387151_39397032
ES.28313.29	chr6	-	3602	7	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-4	-16	intron_retention	FALSE	canonical	3	159	junction_1	1488.17140776487	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397236	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.3	chr6	-	3919	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	1453	junction_3	1245.19508734799	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397413	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.30	chr6	-	3261	8	NNC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-10	-16	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	1196.50630877517	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397011	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396416
ES.28313.31	chr6	-	5888	7	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	24	-16	intron_retention	TRUE	non_canonical	0	0	junction_4	1547.26069770633	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397372	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378927_39380123_39382895_39387021_39387151_39397032
ES.28313.32	chr6	-	5581	4	ISM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	14851	16	156	-16	intron_retention	FALSE	canonical	3	1453	junction_3	55.6496980125579	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39381859	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143
ES.28313.33	chr6	-	4184	6	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-4	-16	intron_retention	FALSE	canonical	3	1453	junction_2	1294.42286753595	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397236	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.34	chr6	-	3752	7	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-2	-16	intron_retention	FALSE	canonical	3	157	junction_6	1255.75896705273	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397003	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39396773
ES.28313.35	chr6	-	5330	3	NNC	ENSMUSG00000029922.16	novel	773	5	NA	NA	390	-16	intron_retention	FALSE	canonical	3	159	junction_1	647	1193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39381274	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39377440_39378143
ES.28313.36	chr6	-	3794	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	25	-16	intron_retention	FALSE	canonical	3	14	junction_2	1531.15366817167	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTGG	NA	False	NA	-12	True	AATAAA	-8	NA	39397371	39374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377395_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.37	chr6	-	2679	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-5	-17	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	1581.99272425376	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTG	NA	False	NA	-13	True	AATAAA	-7	NA	39397237	39374754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377395_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.38	chr6	-	2924	9	NNC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	90	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1260.05565353281	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTG	NA	False	NA	-13	True	AATAAA	-7	NA	39396601	39374754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39394512_39394571_39396400
ES.28313.39	chr6	-	2764	9	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	7	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	1355.61535266277	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTG	NA	False	NA	-13	True	AATAAA	-7	NA	39397225	39374754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032_39397058_39397151
ES.28313.4	chr6	-	2922	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397013	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ES.28313.41	chr6	-	1880	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	-25	1191	-25	148	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCAGACAGTTAGTGT	NA	False	NA	-11	True	AATAAA	-32	NA	39397421	39375928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.42	chr6	-	6950	4	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-21	145	intron_retention	FALSE	canonical	3	1457	junction_1	1298.1993512383	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTGTCAGACAGTTAG	NA	False	NA	-14	True	AATAAA	-29	NA	39397253	39375931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39382895_39387021_39387151_39397032
ES.28313.43	chr6	-	5789	5	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	31	145	intron_retention	FALSE	canonical	1	1	junction_2	1812.87746069612	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACTGTCAGACAGTTAG	NA	False	NA	-14	True	AATAAA	-29	NA	39397365	39375931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39378143_39382895_39387021_39387151_39397032
ES.28313.44	chr6	-	1606	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	17	143	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1528.48450724529	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTGTCAGACAGTT	NA	False	NA	-16	True	AATAAA	-27	NA	39397379	39375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39397032
ES.28313.45	chr6	-	1700	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	14	143	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTGTCAGACAGTT	NA	False	NA	-16	True	AATAAA	-27	NA	39396987	39375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ES.28313.46	chr6	-	1667	8	NNC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-2	143	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	1189.06071659739	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTGTCAGACAGTT	NA	False	NA	-16	True	AATAAA	-27	NA	39397003	39375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396822
ES.28313.47	chr6	-	1774	9	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	19	143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1355.61535266277	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTGTCAGACAGTT	NA	False	NA	-16	True	AATAAA	-27	NA	39397377	39375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376183_39376239_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.48	chr6	-	2686	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	20	143	intron_retention	FALSE	canonical	3	1453	junction_3	1245.19508734799	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAACTGTCAGACAGTT	NA	False	NA	-16	True	AATAAA	-27	NA	39397376	39375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39382895_39387021_39387151_39397032
ES.28313.49	chr6	-	1700	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	20	137	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	1397.39899784695	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGAATTTAACTGTCAG	NA	False	NA	-22	True	AATAAA	-21	NA	39397376	39375939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.5	chr6	-	3112	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	1196.50630877517	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397002	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396572
ES.28313.50	chr6	-	1780	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	48	127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1437.17318911473	1544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTTGTAACATGAATT	NA	False	NA	-32	True	AATAAA	-11	NA	39397348	39375949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377334_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.51	chr6	-	6607	5	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	10	127	intron_retention	FALSE	canonical	3	1457	junction_1	1346.75802856341	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTTGTAACATGAATT	NA	False	NA	-32	True	AATAAA	-11	NA	39397386	39375949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39382895_39387021_39387151_39397032
ES.28313.53	chr6	-	1410	7	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	61	127	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1408.98131049824	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTTGTAACATGAATT	NA	False	NA	-32	True	AATAAA	-11	NA	39396940	39375949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39396773
ES.28313.54	chr6	-	1898	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	-1	125	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	1196.50630877517	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTTTTTGTAACATGAA	NA	False	NA	-34	True	AATAAA	-9	NA	39397002	39375951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396572
ES.28313.55	chr6	-	5508	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	24	-4781	24	2	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCTGTGTGAAATGTC	NA	False	NA	-3	True	AATAAA	-18	NA	39397208	39377691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39382895_39387021_39387151_39397032
ES.28313.56	chr6	-	1373	4	NIC	ENSMUSG00000029922.16	novel	1511	5	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	82	junction_1	1944.59061672802	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGAGTCTGTGTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	39397384	39377696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39378359_39382664_39382895_39387021_39387151_39397032
ES.28313.57	chr6	-	1611	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	-103	3	1	-3	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGAGTCTGTGTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	39397395	39377696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.58	chr6	-	1481	5	FSM	ENSMUSG00000029922.16	ENSMUST00000122996.8	1485	5	-5	9	-5	-3	multi-exon	FALSE	canonical	3	157	junction_4	1508.75983841034	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGAGTCTGTGTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	39397006	39377696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ES.28313.6	chr6	-	7558	5	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	25	0	intron_retention	FALSE	canonical	3	1453	junction_2	1376.04948584708	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397371	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39377440_39378143_39382895_39387021_39387151_39397032
ES.28313.61	chr6	-	1105	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	-356	2	-192	-2	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCGAATGCTGTC	NA	False	NA	-2	True	AATAAA	-23	NA	39397588	39382474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39382895_39387021_39387151_39397032
ES.28313.62	chr6	-	793	3	ISM	ENSMUSG00000029922.16	ENSMUST00000122996.8	1485	5	-16	4787	-16	-2	5prime_fragment	FALSE	canonical	3	157	junction_2	2093.5	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCGAATGCTGTC	NA	False	NA	-2	True	AATAAA	-23	NA	39397017	39382474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39382895_39387021_39387151_39396773
ES.28313.63	chr6	-	216	1	Intergenic	novelGene_23577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTAGAAGATTGTATATA	NA	False	NA	NA	False	NA	NA	NA	39384923	39384707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39384700_39384900
ES.28313.7	chr6	-	2619	7	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1408.98131049824	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39396937	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39396773
ES.28313.8	chr6	-	2941	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	1397.39899784695	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397415	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ES.28313.9	chr6	-	3006	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	1434.8236185422	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397377	39374737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382664_39382895_39387021_39387151_39397032
ES.28314.1	chr6	-	192	1	Intergenic	novelGene_23580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACATCAGATCTCCT	3112	False	NA	NA	False	AATAAA	-7	NA	39420347	39420155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39420200_39420300
ES.28315.1	chr6	-	231	1	Intergenic	novelGene_23581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTATTGTGAATTATAA	NA	False	NA	NA	False	NA	NA	NA	39430291	39430060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39430100_39430300
ES.28316.1	chr6	+	159	1	Intergenic	novelGene_23586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTCATTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	39490026	39490185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39490000_39490200
ES.28317.1	chr6	+	1721	4	NIC	ENSMUSG00000085058.3	novel	370	4	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGCATTGTTACTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	39504443	39521421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_39504579_39506382_39506457_39506625_39506754_39520037
ES.28317.2	chr6	+	2581	1	FSM	ENSMUSG00000085058.3	ENSMUST00000200951.2	749	1	-13	-1819	0	1819	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTAGGCTTGTTTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	39504446	39507027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_39504400_39507000
ES.28318.1	chr6	-	4544	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	-68	-8	-68	8	multi-exon	TRUE	canonical	3	100	junction_17	14.1962653756995	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAGTGTATAATATTCT	NA	False	NA	1	True	AATAAA	-29	NA	39534869	39439303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.10	chr6	-	3954	16	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	66	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	33.1816549048148	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAGTGAGTGTATAAT	NA	False	NA	-4	True	AATAAA	-24	NA	39534735	39439308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39499589_39500694_39534508
ES.28318.11	chr6	-	3387	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	31.690545237333	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCTAGTGAGTGTATAA	NA	False	NA	-5	True	AATAAA	-23	NA	39534822	39439309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39534508
ES.28318.12	chr6	-	4307	20	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	61	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	30.4023799913966	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCTAGTGAGTGTATA	NA	False	NA	-6	True	AATAAA	-22	NA	39534740	39439310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508_39534548_39534648
ES.28318.13	chr6	-	4418	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	309	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.2212336735557	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCTAGTGAGTGTATA	NA	False	NA	-6	True	AATAAA	-22	NA	39534492	39439310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534250
ES.28318.14	chr6	-	4122	18	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	150	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	41.7932793723111	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39534651	39439311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472214_39483634_39483757_39485175_39485300_39499589_39500694_39534508
ES.28318.15	chr6	-	4734	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	27	0	intron_retention	FALSE	canonical	3	100	junction_16	14.6015119850355	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39534774	39439311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.16	chr6	-	5123	8	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	875	0	intron_retention	FALSE	canonical	3	115	junction_6	10.5656354783432	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39462515	39439311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492
ES.28318.18	chr6	-	4345	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	30447	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	30.8122550574994	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39504354	39439311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504184
ES.28318.19	chr6	-	4062	17	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	154	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	32.2518773678371	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATTCCTAGTGAGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	39534647	39439313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39499589_39500694_39534508
ES.28318.2	chr6	-	4575	20	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	37.2191235508675	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGTGAGTGTATAATATT	NA	False	NA	-1	True	AATAAA	-27	NA	39534800	39439305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
ES.28318.21	chr6	-	3969	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	-32	531	-32	344	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGTTTCTATTTCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	39534833	39439842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.22	chr6	-	4048	20	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	-478	343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.6130904085713	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGTTTCTATTTCCTG	NA	False	NA	NA	False	AATAAA	-14	NA	39535279	39439843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442630_39445702_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534974
ES.28318.24	chr6	-	3532	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	30448	63	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	30.8122550574994	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCGCCTCTGGGCCAGC	NA	False	NA	40	True	NA	NA	NA	39504353	39440123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504184
ES.28318.25	chr6	-	3594	20	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	138	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	44.5997900694412	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTTCCTTCAT	NA	False	NA	2	True	ATTAAA	-18	NA	39534663	39440161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485316_39499589_39500694_39504415_39504518_39534508
ES.28318.26	chr6	-	3694	20	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	26	25	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	37.2191235508675	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTTCCTTCAT	NA	False	NA	2	True	ATTAAA	-18	NA	39534775	39440161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
ES.28318.27	chr6	-	3649	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	-31	850	-31	25	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTTCCTTCAT	NA	False	NA	2	True	ATTAAA	-18	NA	39534832	39440161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.28	chr6	-	3390	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	27	25	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	27.1251106227713	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTTCCTTCAT	NA	False	NA	2	True	ATTAAA	-18	NA	39534774	39440161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.32	chr6	-	3485	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	2	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	31.2965501044909	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTTTGGCTCTTCCTT	NA	False	NA	-1	True	ATTAAA	-15	NA	39534799	39440164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39499589_39500694_39534508
ES.28318.33	chr6	-	3211	18	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	453	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	38.2759060336782	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGTGTTTGGCTCTT	NA	False	NA	-5	True	ATTAAA	-11	NA	39534348	39440168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534254
ES.28318.34	chr6	-	1800	2	Intergenic	novelGene_23582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	246	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCTGAATAGTGATAACA	NA	False	NA	NA	False	NA	NA	NA	39448727	39442988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39444599_39448537
ES.28318.35	chr6	-	2242	2	Intergenic	novelGene_23584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	246	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	39449783	39443006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39444581_39449115
ES.28318.36	chr6	-	1836	1	Intergenic	novelGene_23583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	2735	False	NA	NA	False	NA	NA	NA	39444842	39443006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39443000_39444800
ES.28318.37	chr6	-	5441	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	61	3842	61	1984	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGATTAGCCGGGCT	NA	False	NA	NA	False	NA	NA	NA	39534740	39443153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.38	chr6	-	4393	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	20	4931	20	895	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGTCTTTTGTCTT	NA	False	NA	NA	False	CATAAA	-36	NA	39534781	39444242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.39	chr6	-	3940	17	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	47	877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	46.2039889376448	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTTATTTATTAT	NA	False	NA	NA	False	CATAAA	-18	NA	39534754	39444260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39499787_39500296_39500694_39504415_39504518_39534508
ES.28318.4	chr6	-	4281	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	-10	4	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	27.1251106227713	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534811	39439307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.40	chr6	-	4347	16	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	150	877	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	39.9162456484408	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTTATTTATTAT	NA	False	NA	NA	False	CATAAA	-18	NA	39534651	39444260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
ES.28318.41	chr6	-	3901	13	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	34108	877	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	30.3327609836112	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTTATTTATTAT	NA	False	NA	NA	False	CATAAA	-18	NA	39500693	39444260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589
ES.28318.42	chr6	-	4635	15	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	30410	877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.3131396798171	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTTATTTATTAT	NA	False	NA	NA	False	CATAAA	-18	NA	39504391	39444260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474106_39483634_39483757_39485175_39485304_39499589_39500694_39503855
ES.28318.44	chr6	-	3739	15	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	134	5471	134	355	5prime_fragment	FALSE	canonical	3	100	junction_13	14.3199589555905	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAGAATGAGCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	39534667	39444782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.46	chr6	-	3818	16	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	156	354	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	39.9162456484408	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGCAGAATGAGCAAAGG	NA	False	NA	NA	False	NA	NA	NA	39534645	39444783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
ES.28318.47	chr6	-	127	1	Intergenic	novelGene_23585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGCAAGCAGGGACTG	NA	False	NA	NA	False	NA	NA	NA	39460553	39460426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39460400_39460600
ES.28318.48	chr6	-	3269	4	NNC	ENSMUSG00000038456.10	novel	1787	6	NA	NA	52	-8605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.9355139710763	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATGTCCATTGTCAGGA	NA	False	NA	NA	False	AATAAA	-33	NA	39534749	39482675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39484472_39485175_39485304_39499589_39500694_39534508
ES.28318.49	chr6	-	2438	4	ISM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	154	43378	154	-8619	5prime_fragment	FALSE	canonical	3	100	junction_2	17.326921891156	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCAGCATCATTCGAT	NA	False	NA	NA	False	AATAAA	-19	NA	39534647	39482689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.50	chr6	-	176	1	Intergenic	novelGene_23587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCCTCTGCA	NA	False	NA	NA	False	NA	NA	NA	39493348	39493172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39493200_39493300
ES.28318.51	chr6	-	2908	2	Antisense	novelGene_ENSMUSG00000085058.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39509307	39506369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_39508062_39508091
ES.28318.52	chr6	-	2628	1	Intergenic	novelGene_23588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTACTTTTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	39514146	39511518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39511500_39514100
ES.28318.53	chr6	-	206	1	Intergenic	novelGene_23589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTATCCAGCATGTCCCT	NA	False	NA	NA	False	NA	NA	NA	39514860	39514654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39514700_39514900
ES.28318.6	chr6	-	4410	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	146	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.0537169004506	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39534655	39439307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464669_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ES.28318.8	chr6	-	4325	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	-319	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.2212336735557	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAGTGAGTGTATAATA	NA	False	NA	-3	True	AATAAA	-25	NA	39535120	39439307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534974
ES.28318.9	chr6	-	4526	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	-43	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	31.0265219083351	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAGTGAGTGTATAAT	NA	False	NA	-4	True	AATAAA	-24	NA	39534844	39439308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485316_39499589_39500694_39534508
ES.28319.1	chr6	+	341	1	Intergenic	novelGene_23590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGGAAGAGTGTGAC	7963	False	NA	NA	False	AAGAAA	-11	NA	39535505	39535846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39535500_39535800
ES.2832.1	chr10	+	2833	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-148	233	-76	62	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCGTTCTAATTTACTT	NA	False	NA	80	True	TTTAAA	-30	NA	59159041	59207840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.10	chr10	+	1995	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	921	2	-626	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCTTTTTGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	59159191	59207152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.11	chr10	+	3104	8	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	18099	2	-17804	5prime_fragment	FALSE	canonical	3	143	junction_7	24.6444098889689	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAACATAAAACTAACTG	NA	False	NA	NA	False	AGTAAA	-10	NA	59159191	59189974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904
ES.2832.12	chr10	+	2591	15	NNC	ENSMUSG00000019916.15	novel	2918	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	49.1738378259274	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159191	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186386_59187897_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.13	chr10	+	3966	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	-1050	2	-3	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTCTATGTACAACTG	NA	False	NA	NA	False	AATACA	-37	NA	59159191	59209123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.14	chr10	+	2567	15	NNC	ENSMUSG00000019916.15	novel	4043	15	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	69.2910159974522	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTTTTTTTTTTAAA	NA	False	NA	1	True	NA	NA	NA	59159191	59207761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186386_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.15	chr10	+	3946	14	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	2	290	2	5	intron_retention	FALSE	canonical	3	143	junction_7	20.0723543283797	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTGGTATTTTCA	NA	False	NA	23	True	TTTAAA	-3	NA	59159191	59207783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408
ES.2832.16	chr10	+	2507	14	NIC	ENSMUSG00000019916.15	novel	4043	15	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	50.4424213318759	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159234	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.17	chr10	+	2163	11	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	20288	295	20288	0	3prime_fragment	FALSE	canonical	3	143	junction_3	18.6343768342276	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59179477	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.18	chr10	+	1787	9	ISM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	27037	0	27033	0	3prime_fragment	FALSE	canonical	3	143	junction_1	18.0654193142589	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59186222	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.19	chr10	+	3030	8	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	27344	1348	27272	0	3prime_fragment	FALSE	canonical	3	22	junction_1	72.3018050978547	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59186461	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.2	chr10	+	3115	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	-92	-105	-20	105	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAGATTAAGGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	59159097	59208178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.20	chr10	+	3776	1	NIC	ENSMUSG00000019916.15	novel	4043	15	NA	NA	45213	105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAGATTAAGGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	59204402	59208178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59204400_59208200
ES.2832.3	chr10	+	2681	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	14	1348	14	0	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159131	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.6	chr10	+	2394	14	NIC	ENSMUSG00000019916.15	novel	4043	15	NA	NA	1	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	70.4027299094163	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGTATTTTCATGT	NA	False	NA	26	True	AAAAAG	-3	NA	59159186	59207786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.7	chr10	+	8072	3	ISM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	1	24804	1	-24804	intron_retention	FALSE	canonical	3	164	junction_2	28	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATACAAAGAATCCGTGA	NA	False	NA	NA	False	NA	NA	NA	59159186	59182974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59159299_59172875_59172979_59175117
ES.2832.8	chr10	+	3026	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	69	948	1	105	multi-exon	FALSE	canonical	3	22	junction_8	56.7996838163088	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAGATTAAGGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	59159186	59208178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ES.2832.9	chr10	+	2528	14	NIC	ENSMUSG00000019916.15	novel	2918	15	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	49.8111225430032	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	False	NA	18	True	NA	NA	NA	59159187	59207778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59206825
ES.28320.1	chr6	-	174	1	Intergenic	novelGene_23591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	39537638	39537464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39537500_39537600
ES.28321.1	chr6	+	88	1	Intergenic	novelGene_23592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	39538908	39538996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39538900_39539000
ES.28322.1	chr6	+	2560	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	-12	994	-12	23	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTTGCATCTTGTC	NA	False	NA	41	True	AATACA	-41	NA	39550794	39564709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
ES.28322.2	chr6	+	3033	12	Fusion	ENSMUSG00000046947.13_ENSMUSG00000002416.14	novel	3542	8	NA	NA	0	-15	intron_retention	FALSE	canonical	0	0	junction_4	730.577491491752	270	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACGAGGAACTGAGTTA	NA	False	NA	15	True	ATTAAA	-24	NA	39550806	39576390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560076_39560179_39560744_39560997_39562660_39562790_39563774_39563829_39564302_39564783_39573384_39573530_39575199_39575300_39576325
ES.28322.3	chr6	+	2521	8	NNC	ENSMUSG00000046947.13	novel	3542	8	NA	NA	37	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.7829667938676	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTTGCATCTTGTC	NA	False	NA	41	True	AATACA	-41	NA	39550843	39564709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560734_39560997_39562660_39562790_39563774_39563829_39564302
ES.28322.4	chr6	+	1804	9	NNC	ENSMUSG00000046947.13	novel	3542	8	NA	NA	-260	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.682972035266	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTTTTCTTCTTCTT	NA	False	NA	15	True	AATACA	-15	NA	39551657	39564683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560045_39560179_39560744_39560997_39562660_39562790_39563774_39563829_39564302
ES.28322.6	chr6	+	464	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	-7	3914	-7	-3	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTATGTTTCTGATGA	NA	False	NA	27	True	ATTAAA	-36	NA	39569500	39576402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
ES.28322.7	chr6	+	2108	3	NIC	ENSMUSG00000002416.14	novel	4371	4	NA	NA	-2	-15	intron_retention	FALSE	canonical	3	748	junction_2	875.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACGAGGAACTGAGTTA	NA	False	NA	15	True	ATTAAA	-24	NA	39569514	39576390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_39569647_39573384_39575296_39576325
ES.28322.8	chr6	+	4377	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	-2	-3920	-2	9	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTTTTATTTATTTC	NA	False	NA	NA	False	AATAAA	-23	NA	39569514	39580325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ES.28322.9	chr6	+	508	4	NIC	ENSMUSG00000002416.14	novel	491	4	NA	NA	17	-16	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	1061.02413837868	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACGAGGAACTGAGTT	NA	False	NA	14	True	ATTAAA	-23	NA	39569538	39576389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_39569738_39573384_39573530_39575199_39575300_39576325
ES.28323.1	chr6	+	3757	1	Antisense	novelGene_ENSMUSG00000002413.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACAAAAGAAACCTTTT	6964	False	NA	NA	False	NA	NA	NA	39580881	39584638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_39580900_39584600
ES.28323.2	chr6	+	2606	2	Antisense	novelGene_ENSMUSG00000002413.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAGAAAACCCCACA	6964	False	NA	NA	False	NA	NA	NA	39580881	39584625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_39581048_39582185
ES.28324.1	chr6	+	259	1	Intergenic	novelGene_23595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCAAATATAATTGAAGA	NA	False	NA	NA	False	NA	NA	NA	39603135	39603394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39603100_39603400
ES.28325.1	chr6	+	179	1	Intergenic	novelGene_23597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	39682138	39682317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39682100_39682300
ES.28326.1	chr6	+	4397	1	Intergenic	novelGene_23598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	39692380	39696777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39692400_39696800
ES.28326.2	chr6	+	4956	1	Intergenic	novelGene_23599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACCATTCCCTGCCT	NA	False	NA	NA	False	AGTAAA	-33	NA	39692380	39697336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39692400_39697300
ES.28327.1	chr6	-	3320	1	Antisense	novelGene_ENSMUSG00000046947.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGGAGGGGGAAAGGA	1973	False	NA	NA	False	NA	NA	NA	39556189	39552869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_39552900_39556200
ES.28328.1	chr6	-	233	1	Intergenic	novelGene_23593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCAGAGTTTTGTCAC	NA	False	NA	NA	False	AAAAAG	-14	NA	39562056	39561823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39561800_39562100
ES.28329.1	chr6	-	2989	1	Genic_Genomic	ENSMUSG00000086582.2	novel	NA	NA	NA	NA	-50	-5754	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCTAATTGAGTGGC	NA	False	NA	NA	False	NA	NA	NA	39569768	39566779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_39566800_39569800
ES.2833.1	chr10	+	1117	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-121	-366	-121	366	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	1381	False	NA	NA	False	NA	NA	NA	59231455	59232572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59231500_59232600
ES.28330.1	chr6	-	157	1	Intergenic	novelGene_23594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	39570973	39570816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39570800_39571000
ES.28331.1	chr6	-	9572	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGATTATTTTTCTAG	6441	False	NA	-6	True	AATAAA	-20	NA	39702397	39580170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.10	chr6	-	3881	21	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	7	5071	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	11.8915936694793	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTCTCCCTCTTCCTG	6448	False	NA	-15	True	AATAAA	-16	NA	39702390	39585974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39623658_39623779_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.11	chr6	-	3721	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-126	5069	intron_retention	FALSE	canonical	3	23	junction_14	7.11219609778396	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCATTCTCCCTCTTCC	6585	False	NA	-17	True	AATAAA	-14	NA	39702253	39585976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ES.28331.12	chr6	-	2650	21	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	0	3917	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	11.5147731197797	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTCTGCTGCCCGTG	6441	False	NA	NA	False	NA	NA	NA	39702397	39587128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.13	chr6	-	5679	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-110	3415	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAGGAAAGTAGAAAGG	6601	False	NA	NA	False	NA	NA	NA	39702237	39587630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.14	chr6	-	5948	18	FSM	ENSMUSG00000002413.16	ENSMUST00000101497.4	2253	18	-280	-3415	-10	3415	multi-exon	FALSE	canonical	3	23	junction_13	6.86448157302764	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAGGAAAGTAGAAAGG	6431	False	NA	NA	False	NA	NA	NA	39702407	39587630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ES.28331.15	chr6	-	4855	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-12	2383	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	11.7017412346384	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTCTGGGCCTTT	6429	False	NA	NA	False	CATAAA	-14	NA	39702409	39588662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.16	chr6	-	4800	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	7	2383	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTCTGGGCCTTT	6448	False	NA	NA	False	CATAAA	-14	NA	39702390	39588662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.17	chr6	-	4761	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-105	2382	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	12.0981672566356	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTTTGTTCTGGGCCTT	6606	False	NA	NA	False	CATAAA	-13	NA	39702232	39588663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39623658_39623779_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.18	chr6	-	3784	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-58	1302	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATAATTGAGTTTGTAA	6383	False	NA	NA	False	AATAAA	-22	NA	39702455	39589743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.19	chr6	-	3468	19	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	19455	1301	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_18	9.93870101058372	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATAATTGAGTTTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	39682672	39589744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39682572
ES.28331.2	chr6	-	7814	1	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	32204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGATTATTTTTCTAG	4553	False	NA	-6	True	AATAAA	-20	NA	39587984	39580170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39580200_39588000
ES.28331.20	chr6	-	3638	19	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-5	1227	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	9.70379205501198	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCAACAGACATTATTCT	6436	False	NA	NA	False	AATAAA	-16	NA	39702402	39589818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654389_39654505_39654576_39665177_39665280_39702040
ES.28331.21	chr6	-	3082	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	111	769	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGGATCTTTAAGGTG	6552	False	NA	NA	False	AAGAAA	-12	NA	39702286	39590276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.22	chr6	-	3211	19	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-40	765	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	9.70379205501198	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATGAGGATCTTTAA	6401	False	NA	NA	False	AAGAAA	-8	NA	39702437	39590280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654389_39654505_39654576_39665177_39665280_39702040
ES.28331.23	chr6	-	2549	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-80	45	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	7.19481981002759	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGGTTCCCTTATATT	6361	False	NA	NA	False	ATTAAA	-23	NA	39702477	39591000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.24	chr6	-	3315	17	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-116	-1350	intron_retention	FALSE	canonical	3	23	junction_11	7.25403982274705	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTCGTCCTACAGTTC	6595	False	NA	NA	False	NA	NA	NA	39702243	39592395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.25	chr6	-	1999	15	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-128	-10	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	12.679929504729	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACTACCACTAAAAAAAA	6583	False	NA	NA	False	NA	NA	NA	39702255	39616235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.26	chr6	-	1984	13	NNC	ENSMUSG00000002413.16	novel	2253	18	NA	NA	19418	-10	intron_retention	FALSE	canonical	3	4	junction_12	10.9772492000501	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACTACCACTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39682709	39616235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39682572
ES.28331.27	chr6	-	4692	1	FSM	ENSMUSG00000091313.2	ENSMUST00000168364.2	516	1	-3794	-382	-3794	382	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3181	False	NA	NA	False	NA	NA	NA	39634693	39630001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39630000_39634700
ES.28331.28	chr6	-	2982	6	NIC	ENSMUSG00000002413.16	novel	2253	18	NA	NA	17	-8505	intron_retention	FALSE	canonical	3	23	junction_1	8.85437744847146	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAGACAGAGAGAGATG	6458	False	NA	NA	False	NA	NA	NA	39702380	39637017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ES.28331.29	chr6	-	2865	7	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-110	-8505	intron_retention	FALSE	canonical	3	23	junction_2	8.37489635093407	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAGACAGAGAGAGATG	6601	False	NA	NA	False	NA	NA	NA	39702237	39637017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39637924_39638937_39639087_39641937_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.3	chr6	-	9504	19	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-110	-5	intron_retention	FALSE	canonical	0	0	junction_15	9.97342146920851	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCTTAAGATTATTTT	6601	False	NA	-11	True	AATAAA	-15	NA	39702237	39580175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642039_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ES.28331.30	chr6	-	2533	6	ISM	ENSMUSG00000002413.16	ENSMUST00000002487.15	9728	22	-29	60094	-29	-11752	5prime_fragment	FALSE	canonical	3	23	junction_3	8.85437744847146	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATTACTTATTTGAT	6412	False	NA	NA	False	AATAAA	-6	NA	39702426	39640264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.31	chr6	-	2475	3	ISM	ENSMUSG00000002413.16	ENSMUST00000101497.4	2253	18	-271	61515	-1	-24048	5prime_fragment	FALSE	canonical	3	36	junction_2	0.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGAAAGAAG	6440	False	NA	NA	False	NA	NA	NA	39702398	39652560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_39654576_39665177_39665280_39702040
ES.28331.32	chr6	-	203	1	Intergenic	novelGene_23596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTACTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	39664932	39664729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39664700_39664900
ES.28331.4	chr6	-	9295	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-126	-133	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTCTGTGTAAAGTTA	6585	False	NA	NA	False	AATAAA	-35	NA	39702253	39580303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.5	chr6	-	6173	6	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	15465	-141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.0854534893272	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATTTATTTCTGTG	2945	False	NA	NA	False	AATAAA	-27	NA	39604723	39580311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39583781_39585123_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655
ES.28331.6	chr6	-	3953	17	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-12369	-5066	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.49061913328932	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTCTGAAGTTATT	NA	False	NA	NA	False	AGTAAA	-4	NA	39654382	39585236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311
ES.28331.7	chr6	-	4292	19	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-1	-5380	intron_retention	FALSE	canonical	3	23	junction_14	7.11219609778396	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAATTGATACCACTATG	6440	False	NA	NA	False	AATAAA	-32	NA	39702398	39585550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ES.28331.8	chr6	-	4074	21	NNC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	-126	-5391	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	13.3051681687982	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTCAAATTATAATTG	6585	False	NA	NA	False	AATAAA	-21	NA	39702253	39585561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620153_39621171_39621315_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28331.9	chr6	-	3668	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	114	5085	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTTTTCCCCAAGCCT	6555	False	NA	-1	True	AATAAA	-30	NA	39702283	39585960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ES.28332.1	chr6	+	175	1	Intergenic	novelGene_23600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTAGCATCC	NA	False	NA	NA	False	NA	NA	NA	39733725	39733900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39733700_39733900
ES.28333.1	chr6	-	201	1	Intergenic	novelGene_23601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAGGTAACT	NA	False	NA	NA	False	NA	NA	NA	39742489	39742288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39742300_39742500
ES.28334.1	chr6	+	176	1	Intergenic	novelGene_23602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGCTCCAGGGA	NA	False	NA	NA	False	NA	NA	NA	39760312	39760488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39760300_39760500
ES.28335.1	chr6	-	183	1	Intergenic	novelGene_23603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATGGCAACAACAAAA	NA	False	NA	2	True	NA	NA	NA	39764393	39764210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39764200_39764400
ES.28336.1	chr6	-	688	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	83	336	-12	52	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATGTCCTGTGCTT	NA	False	NA	34	True	NA	NA	NA	39787839	39779073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39779479_39782304_39782546_39787797
ES.28336.2	chr6	-	501	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	1	-2	1	2	multi-exon	FALSE	canonical	3	169	junction_1	481	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTGGAATG	NA	False	NA	-16	True	AATAAA	-14	NA	39787818	39779123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_39779479_39782420_39782546_39787797
ES.28336.3	chr6	-	562	3	NNC	ENSMUSG00000029918.10	novel	1107	3	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	527.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTGGAATG	NA	False	NA	-16	True	AATAAA	-14	NA	39787826	39779123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_39779479_39782367_39782546_39787797
ES.28336.4	chr6	-	1223	1	NIC	ENSMUSG00000029918.10	novel	1107	3	NA	NA	2630	2	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTGGAATG	NA	False	NA	-16	True	AATAAA	-14	NA	39780346	39779123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_39779100_39780300
ES.28336.5	chr6	-	157	1	Intergenic	novelGene_23604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	39784758	39784601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39784600_39784800
ES.28337.1	chr6	-	173	1	Intergenic	novelGene_23605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGCATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	39818835	39818662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39818700_39818800
ES.28338.1	chr6	-	214	1	Intergenic	novelGene_23606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCACAGTTACCAT	NA	False	NA	NA	False	NA	NA	NA	39819618	39819404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_39819400_39819600
ES.28339.1	chr6	+	186	1	Intergenic	novelGene_23607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGCTGAT	0	True	NA	NA	False	NA	NA	NA	39872213	39872399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_39872200_39872400
ES.2834.1	chr10	+	3367	1	Antisense	novelGene_ENSMUSG00000009647.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACAAAAACCCTCATGC	NA	False	NA	NA	False	NA	NA	NA	59280491	59283858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_59280500_59283900
ES.28340.1	chr6	+	4976	16	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	-102	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	148.956667822857	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302316	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40332028_40333976_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.10	chr6	+	3016	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	-808	8	808	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTGGCTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	40302428	40374504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.12	chr6	+	2332	18	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	236.910725889569	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40339072_40339124_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.14	chr6	+	2114	15	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	153.966882869038	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343716_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.15	chr6	+	2176	3	FSM	ENSMUSG00000029916.12	ENSMUST00000202949.2	2175	3	-13	12	8	-12	multi-exon	FALSE	canonical	3	547	junction_1	65.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAATGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40302428	40326378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345
ES.28340.16	chr6	+	7399	15	ISM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	-4165	8	4165	intron_retention	FALSE	canonical	3	523	junction_10	43.7012702379252	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCAGTTCTTATAATG	NA	False	NA	NA	False	NA	NA	NA	40302428	40377861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547
ES.28340.17	chr6	+	2218	16	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	148.71174204555	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372641
ES.28340.18	chr6	+	2172	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	323	36	8	-36	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAAACTGTTTGAT	NA	False	NA	-28	True	NA	NA	NA	40302428	40373660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.19	chr6	+	2328	17	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	187.093549043654	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332075_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.2	chr6	+	2346	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	252	-67	-61	67	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTAAATTATTTTTT	NA	False	NA	75	True	NA	NA	NA	40302357	40373763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.20	chr6	+	664	9	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	2847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	199.533675102725	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTGAAAAATAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	40302428	40348671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40348567
ES.28340.21	chr6	+	2250	17	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	191.855567012662	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40350191_40350241_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.22	chr6	+	2327	18	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	237.543570944123	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACATATCCAGTGTAA	NA	False	NA	-2	True	NA	NA	NA	40302428	40373686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40350191_40350241_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.23	chr6	+	2266	16	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	148.989246442673	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTTTAAATTATTTTT	NA	False	NA	74	True	NA	NA	NA	40302428	40373762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358210_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.25	chr6	+	2409	18	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	67	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	213.903092244998	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTAAATTATTTTTT	NA	False	NA	75	True	NA	NA	NA	40302428	40373763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331687_40331742_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.26	chr6	+	3104	5	ISM	ENSMUSG00000029916.12	ENSMUST00000201342.4	785	8	10	9005	8	2350	5prime_fragment	FALSE	canonical	3	547	junction_1	55.6551884373775	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGAAAAATCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	40302428	40336819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978
ES.28340.27	chr6	+	2879	2	ISM	ENSMUSG00000029916.12	ENSMUST00000202949.2	2175	3	-11	17119	10	5570	5prime_fragment	FALSE	canonical	3	547	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	40302430	40309271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40302465_40306426
ES.28340.28	chr6	+	4913	17	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	222.183473943833	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302430	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345614_40350191_40350241_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.29	chr6	+	2346	17	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	189.18467127056	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302434	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40324515_40324667_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.3	chr6	+	5685	15	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	3	-7	intron_retention	FALSE	canonical	3	34	junction_5	193.344041458088	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302423	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547
ES.28340.30	chr6	+	2100	15	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	205.90705254001	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302434	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343716_40353155_40353226_40358137_40358210_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.32	chr6	+	1837	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	338	356	2	-356	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTAGTGCTTCCT	NA	False	NA	NA	False	NA	NA	NA	40302443	40373340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.33	chr6	+	4658	15	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	6	-7	intron_retention	FALSE	canonical	3	517	junction_14	44.2124393798665	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302447	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.34	chr6	+	2369	16	NNC	ENSMUSG00000029916.12	novel	836	8	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.970630960901	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGTGTAATCTAAATGC	NA	False	NA	7	True	NA	NA	NA	40302473	40373695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302672_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.35	chr6	+	2484	16	NNC	ENSMUSG00000029916.12	novel	836	8	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	147.303526396651	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302473	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302793_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.36	chr6	+	2335	16	NNC	ENSMUSG00000029916.12	novel	836	8	NA	NA	-362	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	250.160179795977	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40306063	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40306241_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343716_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.37	chr6	+	2079	14	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	159.707165456735	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40306425	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343716_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.38	chr6	+	2179	14	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	159.533676955182	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40306425	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40345468_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.39	chr6	+	2240	15	ISM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	4320	-67	0	67	3prime_fragment	FALSE	canonical	3	517	junction_14	45.600360274266	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTAAATTATTTTTT	NA	False	NA	75	True	NA	NA	NA	40306425	40373763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.4	chr6	+	2968	15	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	5	797	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	142.276480624085	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCTGCAGAGACCTGG	NA	False	NA	NA	False	NA	NA	NA	40302425	40374493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40302465_40306426_40306534_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.40	chr6	+	5360	4	NNC	ENSMUSG00000029916.12	novel	3174	5	NA	NA	0	2350	intron_retention	FALSE	canonical	3	15	junction_3	301.864207881623	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGAAAAATCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	40306425	40336819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40306534_40324345_40324386_40329286_40329367_40331687
ES.28340.41	chr6	+	5097	11	ISM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	35868	7	11039	-7	3prime_fragment	FALSE	canonical	3	517	junction_10	31.310701046128	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40337973	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.42	chr6	+	4200	9	NNC	ENSMUSG00000029916.12	novel	836	8	NA	NA	-5216	70	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	183.48075512162	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTATTTTTTTTC	NA	False	NA	78	True	NA	NA	NA	40347758	40373766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40350241_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.43	chr6	+	1117	2	ISM	ENSMUSG00000029916.12	ENSMUST00000201751.2	836	8	18572	-986	18572	-7	3prime_fragment	FALSE	canonical	3	517	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40371546	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_40371633_40372658
ES.28340.44	chr6	+	4234	1	Genic_Genomic	ENSMUSG00000029916.12	novel	NA	NA	NA	NA	19767	3279	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGATTCTATCTTCCTC	NA	False	NA	NA	False	NA	NA	NA	40372741	40376975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_40372700_40377000
ES.28340.5	chr6	+	5333	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	322	-3124	7	3124	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAGTGTCAGTTACATT	NA	False	NA	NA	False	NA	NA	NA	40302427	40376820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.6	chr6	+	2288	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGTGTAATCTAAATGC	NA	False	NA	7	True	NA	NA	NA	40302427	40373695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.7	chr6	+	6724	14	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-9	intron_retention	FALSE	canonical	0	0	junction_6	159.688861679137	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACATATCCAGTGTAAT	NA	False	NA	-1	True	NA	NA	NA	40302428	40373687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40334055_40341208_40341302_40343674_40343716_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28340.9	chr6	+	6813	15	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	8	-7	intron_retention	FALSE	canonical	3	517	junction_14	45.6705706161874	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	False	NA	1	True	NA	NA	NA	40302428	40373689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ES.28341.1	chr6	-	3639	1	Intergenic	novelGene_23608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGTTCCTAAAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	40350638	40346999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_40347000_40350600
ES.28342.1	chr6	-	1724	6	Antisense	novelGene_ENSMUSG00000029916.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40370337	40352636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_40353224_40358135_40358222_40360697_40360750_40363745_40363894_40364375_40364475_40369585
ES.28342.2	chr6	-	1034	1	Antisense	novelGene_ENSMUSG00000029916.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40353670	40352636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_40352600_40353700
ES.28343.1	chr6	-	6751	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	-9	0	-9	0	multi-exon	FALSE	canonical	3	15	junction_1	5.09748712602592	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGCTGTGATCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	40413078	40378308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
ES.28343.3	chr6	-	1448	8	FSM	ENSMUSG00000037172.15	ENSMUST00000039008.10	1949	8	-10	511	-8	-511	multi-exon	FALSE	canonical	3	18	junction_1	4.27140468220744	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGTCACCACATAGCTG	NA	False	NA	NA	False	ATTAAA	-12	NA	40413077	40384944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
ES.28343.4	chr6	-	2372	1	Intergenic	novelGene_23609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40407216	40404844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_40404800_40407200
ES.28344.1	chr6	+	747	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	-27	3678	-27	27	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-42	NA	40448258	40457956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.10	chr6	+	6189	7	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	8	1767	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	1049.16517076939	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTTCTTTACAAATT	NA	False	NA	4	True	NA	NA	NA	40448356	40463401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453586_40453770_40454856_40454946_40457786
ES.28344.11	chr6	+	5920	8	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	10	1769	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	979.995730936141	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTCTTTACAAATTCA	NA	False	NA	6	True	NA	NA	NA	40448358	40463403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786_40457861_40458034
ES.28344.12	chr6	+	965	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-31	-1	-9	1	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGGTTATATTTTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	40448377	40457927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.13	chr6	+	1224	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	-20	-16	-5	16	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATTGACATATCTTAA	NA	False	NA	NA	False	ATTAAA	-31	NA	40448381	40457945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.14	chr6	+	999	7	NIC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-5	26	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	1009.70915779413	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCTTAAGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-41	NA	40448381	40457955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40448770_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.15	chr6	+	807	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1038.11106502789	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448382	40457926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448608_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.16	chr6	+	3732	5	NIC	ENSMUSG00000029911.15	novel	933	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2472	junction_2	182.612123091541	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448385	40457926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.17	chr6	+	4165	4	NIC	ENSMUSG00000029911.15	novel	1188	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	2472	junction_2	200.431201829123	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGACATGTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	40448386	40455519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40451660_40453300_40453442_40453681_40453770_40454856
ES.28344.18	chr6	+	5111	7	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	2	1768	intron_retention	FALSE	canonical	3	4	junction_6	1036.65365747464	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTTCTTTACAAATTC	NA	False	NA	5	True	NA	NA	NA	40448388	40463402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786_40461693_40463255
ES.28344.19	chr6	+	2746	12	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	2	1876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1343.91342327406	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTGATCTCACATTATT	NA	False	NA	NA	False	AAGAAA	-10	NA	40448388	40463510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786_40457861_40458034_40458056_40458544_40459776_40460515_40460814_40461638_40461693_40463255
ES.28344.20	chr6	+	1292	6	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_3	1129.71033455484	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448389	40457926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40449068_40451598_40451660_40453300_40453442_40453586_40453770_40454856_40454946_40457786
ES.28344.22	chr6	+	1784	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	-19	-832	3	829	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTTATATCTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	40448389	40458758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.23	chr6	+	5246	3	NIC	ENSMUSG00000029911.15	novel	1188	6	NA	NA	6	-2	intron_retention	FALSE	canonical	3	2472	junction_2	236	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGACATGTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	40448392	40455519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40451660_40453300_40453442_40453681
ES.28344.24	chr6	+	3628	4	NIC	ENSMUSG00000029911.15	novel	1188	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	6	junction_3	1288.22806814459	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448403	40457929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40451660_40453300_40453442_40453681_40453770_40457786
ES.28344.26	chr6	+	6058	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	602	-5472	544	1767	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTTCTTTACAAATT	NA	False	NA	4	True	NA	NA	NA	40449003	40463401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.27	chr6	+	171	1	Intergenic	novelGene_23610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAATATATT	NA	False	NA	NA	False	NA	NA	NA	40456132	40456303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_40456100_40456300
ES.28344.3	chr6	+	874	7	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	27	1763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1278.4152190201	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTAAATCTTCTTTACA	NA	False	NA	0	True	NA	NA	NA	40448312	40463397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40460515_40460814_40463255
ES.28344.4	chr6	+	1482	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	40	2876	-23	829	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTTATATCTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	40448325	40458758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.5	chr6	+	543	6	NIC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	1123.6493403193	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTGGTTATATTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	40448342	40457925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40457786
ES.28344.6	chr6	+	1068	6	FSM	ENSMUSG00000029911.15	ENSMUST00000031971.13	1063	6	-5	0	-5	0	multi-exon	FALSE	canonical	3	1713	junction_1	476.592320542411	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACATGTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	40448343	40455521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856
ES.28344.7	chr6	+	6153	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	58	-1813	-5	1813	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGTCAAATCTCTGC	NA	False	NA	50	True	NA	NA	NA	40448343	40463447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ES.28344.8	chr6	+	1708	6	NIC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	5	-1	intron_retention	FALSE	canonical	3	1713	junction_1	476.338703025484	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTGGTTATATTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	40448353	40457925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40454946_40457786
ES.28344.9	chr6	+	716	7	NNC	ENSMUSG00000029911.15	novel	4398	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	1049.16517076939	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448354	40457926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453586_40453770_40454856_40454946_40457786
ES.28345.1	chr6	-	2695	1	FSM	ENSMUSG00000107359.2	ENSMUST00000201439.2	412	1	260	-2543	260	2543	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40499889	40497194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_40497200_40499900
ES.28346.1	chr6	-	214	1	Intergenic	novelGene_23611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCAAAGTACTTTGAT	1990	False	NA	NA	False	AAAAAG	-5	NA	40611116	40610902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_40610900_40611100
ES.28347.1	chr6	+	143	1	Intergenic	novelGene_23612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGTTTAAA	2644	False	NA	NA	False	NA	NA	NA	40646172	40646315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_40646200_40646300
ES.28348.1	chr6	+	927	3	Antisense	novelGene_ENSMUSG00000029882.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGAGAAGTTGTGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	41007620	41013901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_41007823_41008501_41008737_41013411
ES.28349.1	chr6	+	4528	15	NIC	ENSMUSG00000029869.8	novel	3762	18	NA	NA	20	-5	intron_retention	TRUE	canonical	3	8	junction_2	4.78731316574744	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGTGTGTCCAT	348	False	NA	6	True	ATTAAA	-18	NA	41582435	41597436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593519_41593681_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ES.28349.2	chr6	+	3739	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	23	0	23	0	multi-exon	FALSE	canonical	2	8	junction_2	4.47522978861417	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTCCATGCCTCAG	351	False	NA	13	True	ATTAAA	-25	NA	41582438	41597443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ES.28349.3	chr6	+	3924	17	NIC	ENSMUSG00000029869.8	novel	3762	18	NA	NA	23	-5	intron_retention	FALSE	canonical	2	8	junction_2	4.60298815988049	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGTGTGTCCAT	351	False	NA	6	True	ATTAAA	-18	NA	41582438	41597436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ES.2835.1	chr10	+	4248	6	Antisense	novelGene_ENSMUSG00000009647.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.748331477354788	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAACTAAGCATAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	59414520	59439381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_59414601_59417270_59417466_59424802_59424923_59430775_59430859_59433091_59433195_59435714
ES.2835.2	chr10	+	2655	1	Intergenic	novelGene_2157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTTTATAAAGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	59428592	59431247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59428600_59431200
ES.28350.1	chr6	+	931	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	8	-9	8	3	multi-exon	FALSE	canonical	3	11	junction_5	4.42165358301205	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGGTCTGTATCTGC	NA	False	NA	11	True	AATAAA	-22	NA	42222876	42227384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
ES.28351.1	chr6	+	7383	12	Fusion	ENSMUSG00000029863.14_ENSMUSG00000071506.5	novel	1439	12	NA	NA	1296	-1	intron_retention	FALSE	canonical	0	0	junction_1	49.4887916185854	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42240199	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_42240440_42240661_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42249010_42249068_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.10	chr6	+	3643	10	ISM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	35	3	35	-3	intron_retention	FALSE	canonical	3	71	junction_8	18.6309181499762	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241953	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017
ES.28351.11	chr6	+	6631	9	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	35	-6	intron_retention	FALSE	canonical	3	88	junction_1	14.7727578671012	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATTTTGTGCCTGGTG	NA	False	NA	7	True	AATAAA	-14	NA	42241953	42259436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42256861_42257017
ES.28351.12	chr6	+	3518	11	NNC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.9357550349252	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTTTGTGCCTGGTGT	NA	False	NA	8	True	AATAAA	-15	NA	42241965	42259437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42242132_42244391_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.13	chr6	+	3756	12	NNC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-23	-10	intron_retention	FALSE	canonical	0	0	junction_7	49.5497079075044	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTACTGATTTTGTGCCT	NA	False	NA	3	True	AATAAA	-10	NA	42241966	42259432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42252189_42252262_42253628_42253720_42253803_42253865_42256710_42256861_42257017
ES.28351.14	chr6	+	6373	11	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-18	-10	intron_retention	FALSE	canonical	3	27	junction_8	28.6581576518799	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTACTGATTTTGTGCCT	NA	False	NA	3	True	AATAAA	-10	NA	42241971	42259432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42256861_42257017_42257128_42257279
ES.28351.15	chr6	+	6172	10	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	6	junction_5	37.0375185153889	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATTTTGTGCCTGGTG	NA	False	NA	7	True	AATAAA	-14	NA	42241976	42259436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.16	chr6	+	3691	11	NNC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-11	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	41.3835716196657	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241978	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256698_42256861_42257017
ES.28351.17	chr6	+	4866	12	NNC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	49.152822909778	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241979	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42252262_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.18	chr6	+	3764	10	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	71	junction_7	18.9736659610103	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241982	42259442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.19	chr6	+	6165	11	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	27	junction_7	36.4724553601756	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241989	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.2	chr6	+	6561	11	Fusion	ENSMUSG00000029863.14_ENSMUSG00000071506.5	novel	1439	12	NA	NA	-612	0	intron_retention	FALSE	canonical	3	6	junction_4	44.8325774409636	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241306	42259442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.21	chr6	+	6177	1	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-31	1658	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATAACTAATTATGGAG	NA	False	NA	NA	False	AGTAAA	-6	NA	42242022	42248199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242000_42248200
ES.28351.22	chr6	+	3443	11	NNC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	36.6771045749252	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42242024	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42242132_42244432_42244584_42244806_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.23	chr6	+	3690	11	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	6	junction_5	43.5096541011302	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42242027	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017
ES.28351.24	chr6	+	6274	9	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	6	junction_5	38.4081697038534	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42242031	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42253720_42256710_42256861_42257017
ES.28351.25	chr6	+	4740	12	NNC	ENSMUSG00000029863.14	novel	808	5	NA	NA	128	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.4940334007209	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	42242181	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_42243546_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.26	chr6	+	4930	6	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	-980	-3	intron_retention	TRUE	canonical	0	0	junction_1	50.8118096509069	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42243344	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42244996_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710
ES.28351.27	chr6	+	3900	11	ISM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	1852	-2012	-419	-4	3prime_fragment	FALSE	canonical	3	27	junction_7	36.3880474881519	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTGTGCCTGGTGTT	NA	False	NA	9	True	AATAAA	-16	NA	42243905	42259438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.28	chr6	+	2705	6	ISM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	8795	-2015	-2572	-1	3prime_fragment	FALSE	canonical	3	27	junction_2	44.0481554664892	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGCCTGGTGTTTTT	1005	False	NA	12	True	AATAAA	-19	NA	42250848	42259441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.3	chr6	+	3557	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	-26	-2	-26	2	multi-exon	FALSE	canonical	3	71	junction_8	18.1	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCCTGGTGTTTTTGTG	NA	False	NA	15	True	AATAAA	-22	NA	42241892	42259444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.4	chr6	+	3648	12	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	42.7493173305891	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241918	42259442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.5	chr6	+	6388	10	NIC	ENSMUSG00000029863.14	novel	1439	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	27	junction_7	37.6163216479361	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTGTGCCTGGTGTTT	NA	False	NA	10	True	AATAAA	-17	NA	42241918	42259439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42253720_42253803_42253865_42256710_42256861_42257017
ES.28351.6	chr6	+	3587	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-132	-2016	3	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241921	42259442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ES.28351.7	chr6	+	3737	11	ISM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-132	-2014	3	-2	intron_retention	FALSE	canonical	3	27	junction_8	35.6869724129128	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGCCTGGTGTTTT	NA	False	NA	11	True	AATAAA	-18	NA	42241921	42259440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017
ES.28351.8	chr6	+	3583	11	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	35.1573605380154	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241922	42259442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ES.28351.9	chr6	+	3700	10	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	35	-9	intron_retention	FALSE	canonical	3	6	junction_5	35.1518750707221	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTGATTTTGTGCCTG	NA	False	NA	4	True	AATAAA	-11	NA	42241953	42259433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710_42257128_42257279
ES.28352.1	chr6	-	3961	3	Antisense	novelGene_ENSMUSG00000029862.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTGATAGCACCTTTT	NA	False	NA	NA	False	AAGAAA	-13	NA	42269849	42265111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_42267652_42268261_42268391_42268557
ES.28353.1	chr6	-	178	1	Intergenic	novelGene_23613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCC	NA	False	NA	NA	False	NA	NA	NA	42278290	42278112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_42278100_42278300
ES.28354.1	chr6	+	4277	9	NIC	ENSMUSG00000029862.17	novel	3029	24	NA	NA	-4853	177	intron_retention	FALSE	canonical	1	1	junction_7	0.968245836551854	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGGTTCAGTCCCT	9	False	NA	NA	False	NA	NA	NA	42282225	42291340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42282250_42282404_42282516_42284015_42287108_42287460_42287600_42287856_42287937_42288145_42288185_42289987_42290093_42290171_42290259_42290740
ES.28354.2	chr6	+	3066	9	ISM	ENSMUSG00000029862.17	ENSMUST00000031894.13	3545	23	20585	-1373	-2875	273	3prime_fragment	FALSE	canonical	0	0	junction_2	1.39194109070751	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGCCAGCTCCTTGCA	1987	False	NA	NA	False	AAAAAG	-13	NA	42284203	42292963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_42284230_42284459_42284594_42286874_42287108_42287460_42287600_42287856_42287937_42288145_42288185_42289987_42290093_42290171_42290259_42290740
ES.28354.3	chr6	+	5567	6	NIC	ENSMUSG00000029862.17	novel	3029	24	NA	NA	-2659	-3	intron_retention	FALSE	canonical	1	1	junction_5	1.16619037896906	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAGTGTACCCCACCCC	2203	False	NA	NA	False	AATAAA	-12	NA	42284419	42292687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42287108_42287460_42287600_42287856_42287937_42288145_42288185_42289987_42290093_42290171
ES.28355.1	chr6	+	180	1	Intergenic	novelGene_23614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGACCTTT	NA	False	NA	NA	False	NA	NA	NA	42315628	42315808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_42315600_42315800
ES.28356.1	chr6	-	216	1	Intergenic	novelGene_23615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTATTCATTATTGAC	7856	False	NA	NA	False	NA	NA	NA	42316803	42316587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_42316600_42316800
ES.28357.1	chr6	+	2473	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	-40	172	8	-2	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGTTGCTAGTACTTGA	NA	False	NA	1	True	TATAAA	-11	NA	42326721	42335324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ES.28357.2	chr6	+	2485	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	179	-59	-26	59	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGCAGAGTTCTGATT	NA	False	NA	NA	False	TATAAA	-16	NA	42326940	42335555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ES.28357.3	chr6	+	1940	8	NIC	ENSMUSG00000029860.17	novel	2301	9	NA	NA	-4	2	intron_retention	FALSE	canonical	0	0	junction_2	12.4080290003477	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTAGTACTTGATTTT	NA	False	NA	5	True	TATAAA	-15	NA	42326962	42335328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42327054_42327190_42327411_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ES.28357.4	chr6	+	3592	6	NIC	ENSMUSG00000029860.17	novel	2605	10	NA	NA	-2	3	intron_retention	FALSE	canonical	3	26	junction_3	5.40370243444252	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTAGTACTTGATTTTT	NA	False	NA	6	True	TATAAA	-16	NA	42326964	42335329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095
ES.28357.5	chr6	+	2373	9	NIC	ENSMUSG00000029860.17	novel	2605	10	NA	NA	1	50	intron_retention	FALSE	canonical	3	26	junction_4	4.63680924774785	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAGGGAATCAACGGG	NA	False	NA	53	True	AATAAA	-17	NA	42326973	42335376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333545_42334246_42334368_42334785
ES.28358.1	chr6	-	3440	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	-164	-3	-164	3	multi-exon	FALSE	canonical	0	0	junction_2	1.13454714835211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCCCTTGATGTTTTT	8026	False	NA	NA	False	AATAAA	-18	NA	42350366	42335417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
ES.28358.2	chr6	-	4851	17	NIC	ENSMUSG00000029859.7	novel	3273	18	NA	NA	-123	2	intron_retention	FALSE	canonical	0	0	junction_6	1.11628569371823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTCCCTTGATGTTTT	8067	False	NA	NA	False	AATAAA	-17	NA	42350325	42335418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_42335781_42335869_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
ES.28359.1	chr6	+	174	1	Intergenic	novelGene_23616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGGTTGTTTTTT	1671	False	NA	NA	False	NA	NA	NA	42359983	42360157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_42360000_42360200
ES.2836.1	chr10	-	2906	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	-34	0	-34	0	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	5596	False	NA	-1	True	AATAAA	-20	NA	59452548	59282805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ES.2836.3	chr10	-	2714	7	NNC	ENSMUSG00000009647.14	novel	2872	8	NA	NA	-17813	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	39.2031744746377	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGCATCTCGTTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	59311795	59282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59311712
ES.2836.4	chr10	-	2561	9	NNC	ENSMUSG00000009647.14	novel	2872	8	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.7941280994946	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGCATCTCGTTCTT	5637	False	NA	-3	True	AATAAA	-18	NA	59452507	59282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59283047_59283348_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ES.2836.7	chr10	-	3938	4	ISM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	-39	16086	-39	-14473	5prime_fragment	FALSE	canonical	3	91	junction_3	20.0055547841649	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCTCAAGCAGGTTAA	5591	False	NA	NA	False	AATAAA	-24	NA	59452553	59298891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59302381_59303447_59303619_59326908_59326979_59452345
ES.2836.8	chr10	-	967	2	NNC	ENSMUSG00000009647.14	novel	2872	8	NA	NA	0	16046	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATTTTTTGAATTTT	5630	False	NA	NA	False	GATAAA	-16	NA	59452514	59352621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59353420_59452345
ES.2836.9	chr10	-	1290	2	FSM	ENSMUSG00000009647.14	ENSMUST00000162012.2	535	2	9	-764	9	0	multi-exon	FALSE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAGAAGGACCACG	5676	False	NA	NA	False	AATAAA	-12	NA	59452468	59437832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59439000_59452345
ES.28360.1	chr6	-	4334	8	FSM	ENSMUSG00000029851.6	ENSMUST00000031879.5	4497	8	163	0	163	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTCTTGTGATTT	NA	False	NA	NA	False	TATAAA	-1	NA	42622025	42599949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42601550_42603050_42603389_42604207_42604448_42604852_42605067_42605955_42606054_42606334_42607330_42619402_42620040_42621813
ES.28361.1	chr6	-	5248	9	FSM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	7	2	7	-2	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCAGAGGCTTCACATT	6080	False	NA	NA	False	AATAAA	-14	NA	42687015	42644937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ES.28361.10	chr6	-	2216	2	ISM	ENSMUSG00000036667.15	ENSMUST00000152100.2	2348	6	-38	8157	18	387	5prime_fragment	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAATTAGCCAGCTC	NA	False	NA	NA	False	AATAAA	-25	NA	42669975	42661785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_42663893_42669866
ES.28361.2	chr6	-	5253	9	NNC	ENSMUSG00000036667.15	novel	3342	9	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.903123748999	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACATCCTTCAGAG	NA	False	NA	NA	False	AATAAA	-4	NA	42670030	42644947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_42647258_42650312_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ES.28361.3	chr6	-	5141	9	NNC	ENSMUSG00000036667.15	novel	5257	9	NA	NA	61	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.903123748999	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACATCCTTCAGAG	6151	False	NA	NA	False	AATAAA	-4	NA	42686944	42644947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_42647258_42650312_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ES.28361.4	chr6	-	3293	9	NNC	ENSMUSG00000036667.15	novel	5257	9	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.903123748999	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGTGCTCCAAAGGAT	6068	False	NA	NA	False	AATAAA	-33	NA	42687027	42646878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_42647258_42650312_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ES.28361.5	chr6	-	3287	9	FSM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	39	16	11	-16	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGAGGTAAAAAATTAG	NA	False	NA	NA	False	AATAAA	-20	NA	42669982	42646891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ES.28361.6	chr6	-	3270	9	FSM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	25	1962	8	-22	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCTGAGGAGAGGTAAAA	6098	False	NA	NA	False	AATAAA	-14	NA	42686997	42646897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ES.28361.7	chr6	-	5254	8	FSM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	27	-25	-24	25	multi-exon	FALSE	canonical	1	2	junction_7	3.49927106111883	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATTTATACTCCTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	42669966	42647937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ES.28361.8	chr6	-	3620	8	FSM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	18	1618	18	-1618	multi-exon	FALSE	canonical	1	2	junction_7	3.49927106111883	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACATTCTGGACCTAAAC	NA	False	NA	NA	False	AAAACA	-29	NA	42669975	42649580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ES.28361.9	chr6	-	2991	8	ISM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	25	5270	8	-2243	5prime_fragment	FALSE	canonical	1	2	junction_7	3.49927106111883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCATTGCTCCTGTGTCT	6098	False	NA	NA	False	NA	NA	NA	42686997	42650205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ES.28362.1	chr6	+	5439	15	FSM	ENSMUSG00000033542.14	ENSMUST00000031750.14	5469	15	30	0	30	0	multi-exon	TRUE	canonical	0	0	junction_11	2.0861545523586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGGTTACTTA	6854	False	NA	NA	False	AATAAA	-20	NA	43242545	43266254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_43242678_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260266_43260826_43260989_43262292_43262364_43264473_43264579_43265547
ES.28362.3	chr6	+	5231	15	NNC	ENSMUSG00000033542.14	novel	2938	13	NA	NA	191	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.43800688083943	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCACGTGTTTTCTTCTC	7015	False	NA	NA	False	AATAAA	-10	NA	43242706	43266244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_43242737_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260170_43260826_43260989_43262292_43262364_43264473_43264579_43265547
ES.28362.5	chr6	+	1228	4	FSM	ENSMUSG00000033542.14	ENSMUST00000183313.2	2319	4	1089	2	821	-2	multi-exon	FALSE	canonical	1	3	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTGTTTTCTTCTCAGG	NA	False	NA	NA	False	AATAAA	-13	NA	43260636	43266247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_43260989_43262292_43262364_43264473_43264579_43265547
ES.28363.1	chr6	+	3753	4	NNC	ENSMUSG00000107709.2	novel	3758	2	NA	NA	-25532	-470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCCTGACTAATTTATA	NA	False	NA	NA	False	AGTAAA	-15	NA	43419380	43450782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_43419702_43421128_43421275_43444914_43445100_43447681
ES.28363.2	chr6	+	7458	3	NNC	ENSMUSG00000107709.2	novel	3758	2	NA	NA	-1465	2942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTGGAGATAATTACA	NA	False	NA	NA	False	AATAAA	-19	NA	43443447	43454194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_43444208_43444914_43445100_43447681
ES.28363.3	chr6	+	2898	1	ISM	ENSMUSG00000107709.2	ENSMUST00000203260.2	3758	2	3442	0	3442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACAAGTTTTTCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	43448354	43451252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_43448400_43451300
ES.28364.1	chr6	+	3112	1	Intergenic	novelGene_23617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATCAGTAGATACCTT	NA	False	NA	NA	False	AATAAA	-22	NA	43462231	43465343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_43462200_43465300
ES.28365.1	chr6	+	2079	1	Intergenic	novelGene_23618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	5194	False	NA	NA	False	NA	NA	NA	43614406	43616485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_43614400_43616500
ES.28366.1	chr6	-	3730	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-206	780	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	11.1721227405812	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCAGTGTGTGTGTTTCT	NA	False	NA	NA	False	AATACA	-20	NA	43603106	43321154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
ES.28366.10	chr6	-	2483	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	11	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.2074095796243	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGATAGCAATGCTGT	NA	False	NA	-12	True	ATTAAA	-13	NA	43643142	43321940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ES.28366.11	chr6	-	2973	8	NNC	ENSMUSG00000029735.18	novel	2600	7	NA	NA	-215	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	19.1268589866156	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGATAGCAATGCTGT	NA	False	NA	-12	True	ATTAAA	-13	NA	43603115	43321940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43496094_43496187_43500817_43500891_43536876_43536947_43602626
ES.28366.12	chr6	-	3312	9	NNC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-402	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5667926600146	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGATAGCAATGCT	NA	False	NA	-14	True	ATTAAA	-11	NA	43603302	43321942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43480246_43480353_43482012_43482154_43536876_43536947_43588247_43588320_43602626
ES.28366.13	chr6	-	2396	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	4	-68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	14.6524358913807	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTAGTTGGTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	43643149	43322074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43642693_43642752_43643069
ES.28366.14	chr6	-	2443	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	88	140	-15	-68	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTAGTTGGTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	43643124	43322074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ES.28366.15	chr6	-	2719	7	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-189	-72	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.9254903096549	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGTCTGTAGTTGGT	NA	False	NA	NA	False	AATAAA	-11	NA	43603089	43322078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43588247_43588320_43602626
ES.28366.16	chr6	-	1398	8	NNC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	2	475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.7315583992301	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTGAAGCACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	43602898	43323300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43496094_43496187_43500817_43500891_43588247_43588320_43602626
ES.28366.17	chr6	-	9225	2	ISM	ENSMUSG00000029735.18	ENSMUST00000150599.4	1767	4	65	65021	21	-63569	5prime_fragment	FALSE	canonical	3	41	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAGACATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	43643088	43633545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_43642752_43643069
ES.28366.18	chr6	-	6420	1	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-72	-66491	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGATTTGATGGAATAA	NA	False	NA	NA	False	NA	NA	NA	43642887	43636467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43636500_43642900
ES.28366.2	chr6	-	2843	9	NNC	ENSMUSG00000029735.18	novel	2600	7	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	17.8811178341848	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGGTATTAAGTTCT	NA	False	NA	1	True	ATTAAA	-26	NA	43602900	43321927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43496094_43496187_43500817_43500891_43536876_43536947_43588247_43588320_43602626
ES.28366.3	chr6	-	2460	8	FSM	ENSMUSG00000029735.18	ENSMUST00000114644.8	2148	8	-33	-279	11	6	multi-exon	FALSE	canonical	0	0	junction_2	15.0319387862467	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGTGGTATTAAGTTC	NA	False	NA	0	True	ATTAAA	-25	NA	43643142	43321928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ES.28366.4	chr6	-	2881	7	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-207	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.2570436505085	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCTGTGGTATTAAG	NA	False	NA	-3	True	ATTAAA	-22	NA	43603107	43321931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43536876_43536947_43588247_43588320_43602626
ES.28366.5	chr6	-	2541	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	14.5293510115327	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCTGTGGTATTAAG	NA	False	NA	-3	True	ATTAAA	-22	NA	43643149	43321931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43588247_43588320_43642693_43642752_43643069
ES.28366.6	chr6	-	2589	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	85	-3	-18	3	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCTGTGGTATTAAG	NA	False	NA	-3	True	ATTAAA	-22	NA	43643127	43321931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ES.28366.7	chr6	-	2755	8	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	11.1721227405812	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAATGCTGTGGTATTA	NA	False	NA	-5	True	ATTAAA	-20	NA	43602910	43321933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43602626
ES.28366.9	chr6	-	2566	9	NNC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.822651184945	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCAATGCTGTGGTAT	NA	False	NA	-7	True	ATTAAA	-18	NA	43643095	43321935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43532765_43532851_43536876_43536947_43642693_43642752_43643069
ES.28367.1	chr6	+	178	1	Intergenic	novelGene_23619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	43672629	43672807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_43672600_43672800
ES.28368.1	chr6	-	160	1	Intergenic	novelGene_23620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	43683580	43683420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_43683400_43683600
ES.28369.1	chr6	+	2304	1	Intergenic	novelGene_23621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	44087728	44090032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_44087700_44090000
ES.2837.1	chr10	+	130	1	Intergenic	novelGene_2158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAACTCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59532410	59532540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59532400_59532500
ES.28370.1	chr6	+	1952	2	Intergenic	novelGene_23622	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAATGCTTCTAGTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	44181736	44220948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_44181855_44219114
ES.28370.2	chr6	+	2099	4	Intergenic	novelGene_23623	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTTCTAGTGGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	44181738	44220951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_44181855_44183154_44183225_44185437_44185514_44219114
ES.28371.1	chr6	-	2662	1	FSM	ENSMUSG00000079575.4	ENSMUST00000182751.2	1441	1	1211	-2432	1211	2432	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTAGATATCTGTCA	NA	False	NA	NA	False	AATAAA	-40	NA	46506517	46503855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_46503900_46506500
ES.28372.1	chr6	+	252	1	Intergenic	novelGene_23624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCCCAACCATGACCAA	NA	False	NA	NA	False	NA	NA	NA	46729658	46729910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_46729700_46729900
ES.28373.1	chr6	+	224	1	Intergenic	novelGene_23625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGAAAATTGATAT	NA	False	NA	NA	False	AAAAAG	-26	NA	46821628	46821852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_46821600_46821900
ES.28374.1	chr6	-	152	1	Intergenic	novelGene_23626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	46843558	46843406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_46843400_46843600
ES.28375.1	chr6	+	804	1	Intergenic	novelGene_23627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTTGCAGTCCAACC	NA	False	NA	NA	False	NA	NA	NA	47150841	47151645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47150800_47151600
ES.28376.1	chr6	-	3755	3	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	6.5	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTCTTTTCCTGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	47167374	47115369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47119070_47167177_47167209_47167350
ES.28376.10	chr6	-	4283	1	Intergenic	novelGene_23630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGTTGGTCTGCTAGT	NA	False	NA	-4	True	ATTAAA	-15	NA	47167375	47163092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47163100_47167400
ES.28376.11	chr6	-	1345	3	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7.5	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCATGTTGGTCTGCTAG	NA	False	NA	-5	True	ATTAAA	-14	NA	47167376	47163093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47164382_47167177_47167209_47167350
ES.28376.12	chr6	-	3756	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCTGGTATCCCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	47167374	47163476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47167209_47167350
ES.28376.2	chr6	-	7338	1	Intergenic	novelGene_23628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAAATACCAAGCATGAA	NA	False	NA	NA	False	AATAAA	-19	NA	47165610	47158272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47158300_47165600
ES.28376.3	chr6	-	3671	3	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	9	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCAAAATACCAAGCATG	NA	False	NA	NA	False	AATAAA	-17	NA	47167375	47158274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47158774_47158848_47161996_47167350
ES.28376.4	chr6	-	3744	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTCAAAATACCAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	47167374	47158275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47161996_47167350
ES.28376.5	chr6	-	6963	1	Intergenic	novelGene_23629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGGTGTGGCTTATGA	NA	False	NA	NA	False	AATAAA	-9	NA	47167374	47160411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47160400_47167400
ES.28376.6	chr6	-	1748	4	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9.17726659862414	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACTAAAATCAGGT	NA	False	NA	NA	False	AATAAA	-43	NA	47167374	47160425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47161996_47165802_47165926_47167177_47167209_47167350
ES.28376.7	chr6	-	2554	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGACTTTGCTTTCTT	NA	False	NA	NA	False	TATAAA	-41	NA	47167374	47161013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47161996_47165802
ES.28376.8	chr6	-	1461	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCTAGTGTAATTGGAT	NA	False	NA	-17	True	AGTAAA	-16	NA	47166405	47161137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47161996_47165802
ES.28376.9	chr6	-	4179	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGTCTGCTAGTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	47167411	47163090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47167209_47167350
ES.28377.1	chr6	-	178	1	Intergenic	novelGene_23631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	47198950	47198772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47198800_47199000
ES.28378.1	chr6	-	81	1	Intergenic	novelGene_23632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAACAAACTCATC	NA	False	NA	NA	False	NA	NA	NA	47203227	47203146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47203100_47203200
ES.28379.1	chr6	+	935	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	-7	5351	-7	-712	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACAGTTGAACTTTGT	NA	False	NA	NA	False	AATACA	-19	NA	47221313	47275792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
ES.28379.2	chr6	+	1634	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	2	4643	2	-4	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTAGTGTGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	47221322	47276500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
ES.28379.3	chr6	+	1761	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	5	4513	5	126	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATGTGGGAGACACTG	NA	False	NA	NA	False	AATAAA	-27	NA	47221325	47276630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
ES.28379.4	chr6	+	1606	3	NNC	ENSMUSG00000039419.18	novel	9827	24	NA	NA	41679	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGAATCATGTGGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	47263065	47276624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47263315_47273652_47273734_47275348
ES.2838.1	chr10	+	2355	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	85	2	-1	0	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTCTGTGTCCTTTCT	NA	False	NA	25	True	NA	NA	NA	59538383	59699952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ES.2838.11	chr10	+	3394	10	NNC	ENSMUSG00000020111.16	novel	2442	12	NA	NA	4	-10510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.8635795390393	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGCCAGTCCATCTCC	NA	False	NA	NA	False	AATAAA	-15	NA	59538443	59665679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59663429
ES.2838.12	chr10	+	4030	18	Fusion	ENSMUSG00000020111.16_ENSMUSG00000020109.14	novel	2336	14	NA	NA	-4	-1	multi-exon	FALSE	canonical	0	0	junction_10	74.4215059887478	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	False	NA	30	True	NA	NA	NA	59538445	59735117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.14	chr10	+	1691	6	NNC	ENSMUSG00000020111.16	novel	2294	13	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	82.147184979158	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTGGCTCATTTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	59538482	59592994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59591874
ES.2838.15	chr10	+	226	1	Intergenic	novelGene_2159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGAGAAGTGGGATAG	7846	False	NA	NA	False	NA	NA	NA	59548699	59548925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59548700_59548900
ES.2838.16	chr10	+	2267	5	NNC	ENSMUSG00000020111.16	novel	806	8	NA	NA	-12070	-2609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.0765258986677	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGTTGTTGGTGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	59563835	59590387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59588607
ES.2838.17	chr10	+	9111	1	Antisense	novelGene_ENSMUSG00000091184.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTCCCTGAGTTG	NA	False	NA	NA	False	NA	NA	NA	59629302	59638413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_59629300_59638400
ES.2838.18	chr10	+	3069	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	-29	1	-29	-1	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGGTCTGCATTGAA	NA	False	NA	36	True	NA	NA	NA	59715348	59735123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.19	chr10	+	1810	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-84	512	-14	-5	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTCAGGGATTCAA	NA	False	NA	15	True	NA	NA	NA	59715363	59733831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ES.2838.2	chr10	+	703	3	ISM	ENSMUSG00000020111.16	ENSMUST00000167872.8	4699	4	13	11485	13	-7347	5prime_fragment	FALSE	canonical	3	180	junction_2	29.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTAACTTGGTGACCT	NA	False	NA	NA	False	NA	NA	NA	59538397	59569233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59538510_59563778_59563941_59568804
ES.2838.20	chr10	+	3101	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-83	-780	-13	-1	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGGTCTGCATTGAA	NA	False	NA	36	True	NA	NA	NA	59715364	59735123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ES.2838.21	chr10	+	3107	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	-32	-5	-13	-1	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGGTCTGCATTGAA	NA	False	NA	36	True	NA	NA	NA	59715364	59735123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ES.2838.22	chr10	+	2024	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-82	296	-12	211	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCCAGGCTTATGG	NA	False	NA	6	True	TATAAA	-17	NA	59715365	59734047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ES.2838.23	chr10	+	1752	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	6	1283	-2	5	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGATTCAATTAAGATGTT	NA	False	NA	25	True	TTTAAA	-8	NA	59715383	59733841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.24	chr10	+	1812	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	-6	1264	5	18	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTCAGCTGACTTGCT	NA	False	NA	38	True	TTTAAA	-21	NA	59715390	59733854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ES.2838.26	chr10	+	1618	8	NIC	ENSMUSG00000020109.14	novel	3041	9	NA	NA	13	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	96.6949759157472	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTCAGGGATTCAA	NA	False	NA	15	True	NA	NA	NA	59715409	59733831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59733312
ES.2838.28	chr10	+	4005	7	NIC	ENSMUSG00000020109.14	novel	2238	9	NA	NA	14	-5	intron_retention	FALSE	canonical	3	246	junction_4	19.7125171739515	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTCAGGGATTCAA	NA	False	NA	15	True	NA	NA	NA	59715410	59733831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59731583_59732171
ES.2838.3	chr10	+	2211	6	ISM	ENSMUSG00000020111.16	ENSMUST00000020311.13	2336	14	-15	105862	-15	1094	5prime_fragment	FALSE	canonical	2	6	junction_5	80.2481152426647	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGTTTTTACTGCATC	NA	False	NA	NA	False	ATTAAA	-24	NA	59538405	59594090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59592527
ES.2838.30	chr10	+	1347	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	29	1694	-14	-412	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCGCACAGCCATCCT	NA	False	NA	NA	False	TTTAAA	-15	NA	59715425	59733424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ES.2838.32	chr10	+	1503	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	-7	-1	-7	1	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTGGCTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	59715432	59732598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
ES.2838.33	chr10	+	1268	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	71	1702	1	-414	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACACCGCACAGCCATC	NA	False	NA	NA	False	TTTAAA	-13	NA	59715448	59733422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.34	chr10	+	1869	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	95	1077	25	211	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCCAGGCTTATGG	NA	False	NA	6	True	TATAAA	-17	NA	59715472	59734047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.35	chr10	+	1918	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	81	1071	30	211	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCCAGGCTTATGG	NA	False	NA	6	True	TATAAA	-17	NA	59715477	59734047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ES.2838.36	chr10	+	3042	10	NNC	ENSMUSG00000020109.14	novel	3041	9	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	115.630638000681	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCAGTGGTGGGTCT	NA	False	NA	28	True	NA	NA	NA	59715478	59735115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59732510_59732622_59733312
ES.2838.37	chr10	+	4041	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	84	-1055	33	1049	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCACTGAGGTCAGATT	NA	False	NA	NA	False	NA	NA	NA	59715480	59736173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ES.2838.38	chr10	+	2825	10	NNC	ENSMUSG00000020109.14	novel	3041	9	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	92.5276068246194	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	False	NA	30	True	NA	NA	NA	59715496	59735117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312_59733867_59733956
ES.2838.39	chr10	+	173	1	Intergenic	novelGene_2161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAATAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59717304	59717477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59717300_59717500
ES.2838.4	chr10	+	2427	3	ISM	ENSMUSG00000020111.16	ENSMUST00000167872.8	4699	4	30	9744	-6	-5606	5prime_fragment	FALSE	canonical	3	180	junction_2	29.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTGAATACTTCTTTA	NA	False	NA	NA	False	AGTAAA	-9	NA	59538414	59570974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59538510_59563778_59563941_59568804
ES.2838.40	chr10	+	1698	9	NNC	ENSMUSG00000020109.14	novel	3041	9	NA	NA	10524	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	119.964578105372	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCCAGGCTTATGG	NA	False	NA	6	True	TATAAA	-17	NA	59725971	59734047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59732510_59732622_59733312
ES.2838.41	chr10	+	3566	6	ISM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	11338	3	11287	-3	intron_retention	FALSE	canonical	3	241	junction_4	24.3146046646866	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGCAGTGGTGGGTCT	NA	False	NA	28	True	NA	NA	NA	59726734	59735115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
ES.2838.5	chr10	+	2992	18	Fusion	ENSMUSG00000020111.16_ENSMUSG00000020109.14	novel	2336	14	NA	NA	-4	214	multi-exon	FALSE	canonical	0	0	junction_10	74.4215059887478	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCCAGGCTTATGGTTA	NA	False	NA	9	True	TATAAA	-20	NA	59538416	59734050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ES.2838.6	chr10	+	2184	5	NNC	ENSMUSG00000020111.16	novel	1732	5	NA	NA	-8	408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	91.3684163154862	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTTTAGCATCTAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	59538431	59587935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59538510_59563778_59563941_59568808_59568980_59576481_59576645_59586325
ES.2838.7	chr10	+	2178	11	NIC	ENSMUSG00000020111.16	novel	2442	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_5	61.0842860316792	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCCGCAAGAGCTCTG	NA	False	NA	15	True	NA	NA	NA	59538435	59699942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ES.2838.8	chr10	+	4641	5	FSM	ENSMUSG00000020111.16	ENSMUST00000165405.2	1732	5	-43	-2866	-3	-2603	multi-exon	FALSE	canonical	3	163	junction_3	28.4725745235657	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGGTGGTGATGGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	59538436	59590393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325
ES.2838.9	chr10	+	1635	6	NNC	ENSMUSG00000020111.16	novel	2294	13	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	82.5275711504949	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTGGCTCATTTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	59538442	59592994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59591970
ES.28380.1	chr6	+	2107	1	ISM	ENSMUSG00000039419.18	ENSMUST00000114641.8	9827	24	2242027	19	57635	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTATCCTAAAAGCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	47279021	47281128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47279000_47281100
ES.28381.1	chr6	+	277	1	Intergenic	novelGene_23633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTGGGTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	47324444	47324721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47324400_47324700
ES.28381.2	chr6	+	174	1	Intergenic	novelGene_23634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	47324446	47324620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47324400_47324600
ES.28382.1	chr6	+	221	1	Intergenic	novelGene_23635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTAGGAGTCTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	47387416	47387637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47387400_47387600
ES.28383.1	chr6	+	3226	22	NIC	ENSMUSG00000029686.16	novel	569	4	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	134.47165444933	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTATATTCCCATTGTC	NA	False	NA	17	True	AATAAA	-18	NA	47430330	47503071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430562_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.10	chr6	+	4500	20	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	0	10	intron_retention	FALSE	canonical	3	204	junction_1	97.4057680864419	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTTTTGTT	NA	False	NA	18	True	AATAAA	-23	NA	47430837	47503002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.11	chr6	+	3047	22	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	2	12	intron_retention	FALSE	canonical	0	0	junction_9	156.998375137829	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATTTGGTTTTGTTTT	NA	False	NA	20	True	AATAAA	-25	NA	47430839	47503004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486042_47491737_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.12	chr6	+	3098	24	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	24	75425	intron_retention	FALSE	non_canonical	0	0	junction_22	187.662418626744	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCTAACAGAAGTTCGA	NA	False	NA	NA	False	NA	NA	NA	47430861	47578498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487_47502993_47568016_47568072_47578473
ES.28383.13	chr6	+	4834	3	ISM	ENSMUSG00000029686.16	ENSMUST00000146200.8	2385	20	35	24258	35	2271	intron_retention	FALSE	canonical	3	204	junction_1	230.5	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCTAAATTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	47430872	47476442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47430964_47461677_47461979_47472000
ES.28383.14	chr6	+	4859	20	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	48	0	intron_retention	FALSE	canonical	3	204	junction_1	102.046673369132	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	False	NA	19	True	AATAAA	-20	NA	47430885	47503073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.15	chr6	+	3220	22	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	49	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	133.679601389533	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATATTCCCATTGT	NA	False	NA	16	True	AATAAA	-17	NA	47430886	47503070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431113_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.17	chr6	+	4079	21	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	60	3	intron_retention	FALSE	canonical	3	204	junction_1	95.0485533819427	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47430897	47503076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.18	chr6	+	3183	21	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	101	15	intron_retention	FALSE	canonical	3	14	junction_1	134.794695741338	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGGTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-28	NA	47430938	47503007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431113_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.19	chr6	+	3473	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-306	-6	110	6	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCATTGTCTTCCTGAA	NA	False	NA	25	True	AATAAA	-26	NA	47430947	47503079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.2	chr6	+	2956	22	NNC	ENSMUSG00000029686.16	novel	569	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.454938032226	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	False	NA	8	True	AATAAA	-13	NA	47430346	47502992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430387_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.21	chr6	+	3365	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-207	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	141.229505566756	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGGTTTTGTTTTAA	NA	False	NA	22	True	AATAAA	-27	NA	47431046	47503006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474387_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.23	chr6	+	3340	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-188	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.454938032226	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTATATTCCCATTGTC	NA	False	NA	17	True	AATAAA	-18	NA	47431065	47503071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431411_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.24	chr6	+	3318	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-184	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.811744631578	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTTGTTTTAAGTT	NA	False	NA	25	True	AATAAA	-30	NA	47431069	47503009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47468660_47468698_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.25	chr6	+	3168	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	-108	101	-108	-20	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	False	NA	-12	True	NA	NA	NA	47431145	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.26	chr6	+	3354	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-108	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.378022772606	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47431145	47503076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47438812_47438895_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.27	chr6	+	3257	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-86	13	intron_retention	FALSE	canonical	3	398	junction_1	63.578691398927	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTTGGTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-26	NA	47431167	47503005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.28	chr6	+	3269	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-85	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	180.881798992081	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47431168	47503008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47484741_47484830_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.29	chr6	+	3045	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-71	12	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	143.950434177879	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATTTGGTTTTGTTTT	NA	False	NA	20	True	AATAAA	-25	NA	47431182	47503004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.3	chr6	+	3247	23	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	84	5	intron_retention	FALSE	canonical	0	0	junction_1	153.468251219043	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCATTGTCTTCCTGA	NA	False	NA	24	True	AATAAA	-25	NA	47430509	47503078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430562_47430770_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.30	chr6	+	3223	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-41	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	140.469103937477	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCCATTGTCTTCCTG	NA	False	NA	23	True	AATAAA	-24	NA	47431212	47503077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479343_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.33	chr6	+	4353	20	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	1	9	intron_retention	FALSE	canonical	3	398	junction_1	66.8618702646797	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGCATTTGGTTTTGT	NA	False	NA	17	True	AATAAA	-22	NA	47431254	47503001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500739_47501450_47501565_47502487
ES.28383.34	chr6	+	3132	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	18	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	209.297565858708	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47431271	47503076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47468497_47468557_47468916_47469019_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.37	chr6	+	2929	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	27	7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	144.047040927608	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTTGCATTTGGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	47431280	47502999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.38	chr6	+	2928	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	28	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	140.449234600976	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGCATTTGGTTTTG	NA	False	NA	16	True	AATAAA	-21	NA	47431281	47503000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.39	chr6	+	5322	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	28	-3	intron_retention	FALSE	canonical	3	398	junction_1	65.711034081043	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATATTCCCATTGT	NA	False	NA	16	True	AATAAA	-17	NA	47431281	47503070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.4	chr6	+	3307	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	163	16	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47430588	47503008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.40	chr6	+	3108	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	32	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.886453585969	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAGTTGCATTTGGTTT	NA	False	NA	14	True	AATAAA	-19	NA	47431285	47502998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47476477_47476532_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.41	chr6	+	2998	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	141.11154141381	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTGTACAAGTTGCAT	NA	False	NA	7	True	AATAAA	-12	NA	47431286	47502991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491767_47491890_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.42	chr6	+	5730	19	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-31	-20	intron_retention	FALSE	canonical	3	398	junction_1	68.6609130994798	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	False	NA	-12	True	NA	NA	NA	47431290	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450
ES.28383.44	chr6	+	4839	20	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-29	14	intron_retention	FALSE	canonical	3	398	junction_1	68.0682808562532	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGGTTTTGTTTTAA	NA	False	NA	22	True	AATAAA	-27	NA	47431292	47503006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.45	chr6	+	6622	21	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-20	9	intron_retention	FALSE	canonical	1	1	junction_2	139.904288711962	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGCATTTGGTTTTGT	NA	False	NA	17	True	AATAAA	-22	NA	47431301	47503001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47468497_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.47	chr6	+	4045	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-10	10	intron_retention	FALSE	canonical	3	398	junction_1	60.6615817466047	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTTTTGTT	NA	False	NA	18	True	AATAAA	-23	NA	47431311	47503002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.48	chr6	+	3047	23	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	234.151024937622	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTCTGTACAAGTTGCA	NA	False	NA	6	True	AATAAA	-11	NA	47431317	47502990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47468497_47468557_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485453_47485603_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.49	chr6	+	3013	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	140.165079221276	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTTGCATTTGGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	47431317	47502999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500729_47501450_47501565_47502487
ES.28383.5	chr6	+	3185	23	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-45	16	intron_retention	FALSE	canonical	0	0	junction_1	178.378022772606	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGTTTTGTTTTAAGT	NA	False	NA	24	True	AATAAA	-29	NA	47430792	47503008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47438812_47438895_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.50	chr6	+	3879	21	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-4	10	intron_retention	FALSE	canonical	3	398	junction_1	66.3531461198337	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTTTTGTT	NA	False	NA	18	True	AATAAA	-23	NA	47431317	47503002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.51	chr6	+	9428	15	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-2	12	intron_retention	FALSE	canonical	3	398	junction_1	61.5941290602755	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATTTGGTTTTGTTTT	NA	False	NA	20	True	AATAAA	-25	NA	47431319	47503004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47496147_47496581_47500739_47501450
ES.28383.52	chr6	+	3104	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	137.325572728353	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	False	NA	19	True	AATAAA	-20	NA	47431320	47503073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497716_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.53	chr6	+	522	2	FSM	ENSMUSG00000029686.16	ENSMUST00000143941.3	530	2	8	0	8	0	multi-exon	FALSE	canonical	3	398	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTTTTTCAGCAGAG	NA	False	NA	7	True	AATAAA	-18	NA	47431329	47462111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47431418_47461677
ES.28383.54	chr6	+	2681	19	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	9	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	199.395815798689	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	False	NA	-12	True	NA	NA	NA	47431330	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495221_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.56	chr6	+	6157	20	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	40	-20	intron_retention	FALSE	canonical	3	398	junction_1	60.8180156280255	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	False	NA	-12	True	NA	NA	NA	47431361	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.58	chr6	+	3576	22	NNC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	90	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	135.859487903918	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTTTTGTT	NA	False	NA	18	True	AATAAA	-23	NA	47431411	47503002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47432062_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.59	chr6	+	4190	1	Intergenic	novelGene_23636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCCTGAATTCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	47440710	47444900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47440700_47444900
ES.28383.6	chr6	+	3891	21	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-20	-20	intron_retention	FALSE	canonical	0	0	junction_13	160.667047025829	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	False	NA	-12	True	NA	NA	NA	47430817	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495102_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.60	chr6	+	180	1	Intergenic	novelGene_23638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTAAATTATATGCA	5340	False	NA	NA	False	NA	NA	NA	47460343	47460523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47460300_47460500
ES.28383.61	chr6	+	2899	21	ISM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	30421	101	-30068	-20	3prime_fragment	FALSE	canonical	3	523	junction_7	50.5602610752753	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	6671	False	NA	-12	True	NA	NA	NA	47461674	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.62	chr6	+	4950	20	ISM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	38496	-3	-21993	3	3prime_fragment	FALSE	canonical	3	523	junction_6	49.3731902084253	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	1397	False	NA	22	True	AATAAA	-23	NA	47469749	47503076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.63	chr6	+	2550	20	NNC	ENSMUSG00000029686.16	novel	569	4	NA	NA	-19882	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.548304255731	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	3508	False	NA	-12	True	NA	NA	NA	47471860	47502972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47471976_47474139_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.64	chr6	+	3606	10	NIC	ENSMUSG00000029686.16	novel	3161	22	NA	NA	-5731	13	intron_retention	FALSE	canonical	0	0	junction_3	191.676489281315	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTTGGTTTTGTTTTA	5221	False	NA	21	True	AATAAA	-26	NA	47486011	47503005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47486038_47491728_47491837_47491912_47492020_47494035_47494168_47495098_47496147_47496581_47497820_47500011_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.65	chr6	+	172	1	Intergenic	novelGene_23639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAATAATTATA	948	False	NA	NA	False	NA	NA	NA	47546654	47546826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47546700_47546800
ES.28383.66	chr6	+	6416	1	Antisense	novelGene_ENSMUSG00000029687.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCTAACAGAAGTTCGA	NA	False	NA	NA	False	NA	NA	NA	47572082	47578498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_47572100_47578500
ES.28383.67	chr6	+	5592	1	Antisense	novelGene_ENSMUSG00000029687.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTGGTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	47572088	47577680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_47572100_47577700
ES.28383.68	chr6	+	5200	1	Intergenic	novelGene_23640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAAATTCCAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	47572822	47578022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47572800_47578000
ES.28383.7	chr6	+	3085	22	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-19	7	intron_retention	FALSE	canonical	1	4	junction_6	156.362260352634	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTTGCATTTGGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	47430818	47502999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479343_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28383.8	chr6	+	3207	22	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	-17	3	intron_retention	FALSE	canonical	0	0	junction_4	157.079337811652	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCCCATTGTCTTCCT	NA	False	NA	22	True	AATAAA	-23	NA	47430820	47503076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474387_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ES.28384.1	chr6	-	2666	1	Genic_Genomic	ENSMUSG00000052241.4	novel	NA	NA	NA	NA	-736	1385	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGATTCGCCCTGCC	NA	False	NA	NA	False	AATACA	-23	NA	47431990	47429324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_47429300_47432000
ES.28385.1	chr6	-	5744	1	Intergenic	novelGene_23637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	47459895	47454151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47454200_47459900
ES.28386.1	chr6	-	3284	4	Antisense	novelGene_ENSMUSG00000029686.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTAGTAACTGGGAACTA	NA	False	NA	NA	False	NA	NA	NA	47492495	47482859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47485321_47485904_47486032_47491723_47491835_47491910
ES.28386.2	chr6	-	5387	1	Antisense	novelGene_ENSMUSG00000029686.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	47492495	47487108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47487100_47492500
ES.28387.1	chr6	-	2691	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	443	junction_6	133.55213528621	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571994	47507072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.10	chr6	-	4041	18	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-7	45	intron_retention	FALSE	canonical	0	0	junction_1	213.759930666338	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571971	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507530_47508670_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.11	chr6	-	4008	18	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	1	45	intron_retention	FALSE	canonical	3	225	junction_15	173.713840179464	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571963	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.12	chr6	-	5049	17	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	57	45	intron_retention	FALSE	canonical	3	406	junction_6	147.933631656226	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571907	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47518905_47519299_47519341_47520879_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.13	chr6	-	3081	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	14	45	intron_retention	FALSE	canonical	3	32	junction_10	263.113457196747	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571950	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.14	chr6	-	3796	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-5	45	intron_retention	FALSE	canonical	3	406	junction_6	157.062905145803	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571969	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.15	chr6	-	3711	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	12	45	intron_retention	FALSE	canonical	3	13	junction_11	286.012009898351	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571952	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.16	chr6	-	2729	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-56	45	combination_of_known_junctions	FALSE	canonical	3	63	junction_19	236.697874212063	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47572331	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47572117
ES.28387.17	chr6	-	3553	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	61	45	intron_retention	FALSE	canonical	3	225	junction_16	196.052430629043	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571903	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.18	chr6	-	2536	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-9	45	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47572001	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.19	chr6	-	7758	6	NIC	ENSMUSG00000029687.17	novel	2670	19	NA	NA	-1177	45	intron_retention	FALSE	canonical	3	410	junction_5	236.898628109156	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47518846	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47517790_47518778
ES.28387.2	chr6	-	2819	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-32	0	-4	0	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571996	47507072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.20	chr6	-	2654	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-2	44	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGTCCTAGAACATC	NA	False	NA	-14	True	AATAAA	-23	NA	47571994	47507208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.22	chr6	-	2391	18	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	43	combination_of_known_splicesites	FALSE	canonical	3	26	junction_17	250.912742108186	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571958	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47571827
ES.28387.23	chr6	-	3017	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	28	43	intron_retention	FALSE	canonical	3	410	junction_6	139.150387160488	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571936	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.24	chr6	-	2601	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-34	43	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	225.69798458762	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47572026	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.25	chr6	-	1611	12	NIC	ENSMUSG00000029687.17	novel	2670	19	NA	NA	-48	43	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	300.17914761215	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47528743	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665
ES.28387.26	chr6	-	3672	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-5	43	intron_retention	FALSE	canonical	3	406	junction_6	139.841499783606	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571997	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.28	chr6	-	2658	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	43	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	239.071333482446	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571957	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.3	chr6	-	2710	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_19	235.431306917768	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTGTTAGTATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	47572279	47507075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47572216
ES.28387.31	chr6	-	2797	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	56	43	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_19	232.606476378422	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571908	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571624
ES.28387.32	chr6	-	2751	21	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	293.328808677225	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571958	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47567672_47567780_47571827
ES.28387.33	chr6	-	2630	21	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	24	43	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	321.453958600606	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47572251	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47572216
ES.28387.34	chr6	-	2489	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-43	43	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_18	221.487284700388	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47572318	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47572216
ES.28387.36	chr6	-	2533	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	73	43	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	283.740351831772	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571891	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.4	chr6	-	2625	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTGTTAGTATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	47571958	47507075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.40	chr6	-	2469	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	234.670750437951	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571957	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571875
ES.28387.41	chr6	-	2539	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	287	43	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_19	262.775321912264	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTGTCCTAGAACAT	NA	False	NA	-15	True	AATAAA	-22	NA	47571677	47507209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571624
ES.28387.43	chr6	-	3698	3	NIC	ENSMUSG00000029687.17	novel	2115	18	NA	NA	-747	41	intron_retention	FALSE	canonical	3	896	junction_2	103	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCACTTGTCCTAGAAC	NA	False	NA	-17	True	AATAAA	-20	NA	47512806	47507211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47509918_47510675
ES.28387.44	chr6	-	4058	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	56	41	intron_retention	FALSE	canonical	3	13	junction_10	281.372194305683	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCACTTGTCCTAGAAC	NA	False	NA	-17	True	AATAAA	-20	NA	47571908	47507211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.45	chr6	-	3331	18	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	41	intron_retention	FALSE	canonical	3	225	junction_15	196.249082602048	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCACTTGTCCTAGAAC	NA	False	NA	-17	True	AATAAA	-20	NA	47571964	47507211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.46	chr6	-	2496	19	NIC	ENSMUSG00000029687.17	novel	2775	20	NA	NA	14	41	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	260.155040431141	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCACTTGTCCTAGAAC	NA	False	NA	-17	True	AATAAA	-20	NA	47571950	47507211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.47	chr6	-	2652	20	FSM	ENSMUSG00000029687.17	ENSMUST00000114618.8	2775	20	-17	140	11	40	multi-exon	FALSE	canonical	3	48	junction_12	268.321921839443	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCACTTGTCCTAGAA	NA	False	NA	-18	True	AATAAA	-19	NA	47571981	47507212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.48	chr6	-	4063	18	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-5	39	intron_retention	FALSE	canonical	3	670	junction_15	94.2399572908064	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATCACTTGTCCTAGA	NA	False	NA	-19	True	AATAAA	-18	NA	47571997	47507213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.5	chr6	-	2860	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	57	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	246.89680686675	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTGTTAGTATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	47571907	47507075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571694
ES.28387.50	chr6	-	7831	3	FSM	ENSMUSG00000029687.17	ENSMUST00000203857.2	500	3	-7293	-38	1300	38	multi-exon	FALSE	canonical	3	987	junction_2	57.5	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47516343	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47507536_47508674_47508760_47508918
ES.28387.51	chr6	-	1864	4	ISM	ENSMUSG00000029687.17	ENSMUST00000204243.3	785	5	5618	142	8	38	3prime_fragment	FALSE	canonical	1	2	junction_2	477.455291682431	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47512051	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_47507536_47508674_47508760_47509835_47509918_47510675
ES.28387.53	chr6	-	7215	16	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-8204	38	intron_retention	FALSE	canonical	3	406	junction_6	177.733758439102	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47539352	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111
ES.28387.54	chr6	-	2683	21	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	23	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	368.767338575422	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571941	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47517908_47518041_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.55	chr6	-	6677	2	ISM	ENSMUSG00000029687.17	ENSMUST00000170311.8	483	3	2994	-2349	-2590	38	3prime_fragment	FALSE	canonical	3	896	junction_1	0	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47514649	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_47509918_47510675
ES.28387.56	chr6	-	2727	20	NNC	ENSMUSG00000029687.17	novel	2775	20	NA	NA	109	38	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_12	304.754585430179	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571855	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571624
ES.28387.57	chr6	-	2612	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	110	38	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_18	218.211048593776	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571854	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571624
ES.28387.58	chr6	-	2106	16	NIC	ENSMUSG00000029687.17	novel	2670	19	NA	NA	43	38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	251.124634837409	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571921	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47571827
ES.28387.6	chr6	-	2756	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCCAGTGTTAGTATTG	NA	False	NA	NA	False	AATAAA	-22	NA	47571964	47507076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.63	chr6	-	3235	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	38	intron_retention	FALSE	canonical	3	32	junction_11	242.112597142922	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571958	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.64	chr6	-	2760	21	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-5	38	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	288.780275469084	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571997	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47523682_47523765_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.65	chr6	-	3704	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	38	intron_retention	FALSE	canonical	3	406	junction_7	171.313705822007	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAATCACTTGTCCTAG	NA	False	NA	-20	True	AATAAA	-17	NA	47571957	47507214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.66	chr6	-	2499	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	7	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	235.051327465322	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATCACTTGTCCTA	NA	False	NA	-21	True	AATAAA	-16	NA	47571957	47507215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520961_47521371_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.69	chr6	-	4943	17	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	-1690	-259	-1340	37	intron_retention	FALSE	canonical	3	443	junction_6	137.892564611004	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATCACTTGTCCTA	6988	False	NA	-21	True	AATAAA	-16	NA	47556284	47507215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469
ES.28387.7	chr6	-	2575	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-8	58	combination_of_known_junctions	FALSE	canonical	3	443	junction_6	133.55213528621	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCACCGACTGATTCTA	NA	False	NA	0	True	AATAAA	-37	NA	47572000	47507194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.70	chr6	-	5253	16	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	33	37	intron_retention	FALSE	canonical	0	0	junction_7	239.554271280829	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATCACTTGTCCTA	NA	False	NA	-21	True	AATAAA	-16	NA	47571931	47507215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47522609_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.73	chr6	-	3811	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-988	37	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	216.537204912022	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATCACTTGTCCTA	7340	False	NA	-21	True	AATAAA	-16	NA	47555932	47507215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477
ES.28387.74	chr6	-	3810	17	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	20	36	intron_retention	FALSE	canonical	0	0	junction_7	271.541138400335	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAATCACTTGTCCT	NA	False	NA	-22	True	AATAAA	-15	NA	47571944	47507216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47519341_47520879_47520975_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ES.28387.75	chr6	-	2546	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-9	35	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_19	265.195438306572	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGAATCACTTGTCC	NA	False	NA	-23	True	AATAAA	-14	NA	47572284	47507217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47572216
ES.28387.76	chr6	-	2430	18	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	14	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	244.38733508546	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGAATCACTTGTCC	NA	False	NA	-23	True	AATAAA	-14	NA	47571950	47507217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47521435_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.77	chr6	-	3973	19	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-2520	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	287.636258639189	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGAATCACTTGTCC	5808	False	NA	-23	True	AATAAA	-14	NA	47557464	47507217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517796_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47555876
ES.28387.78	chr6	-	9086	6	NIC	ENSMUSG00000029687.17	novel	2670	19	NA	NA	-1927	29	intron_retention	FALSE	canonical	3	406	junction_5	238.419462292825	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGTTGTTGAATCAC	NA	False	NA	-29	True	AATAAA	-8	NA	47519596	47507223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47518905_47519299
ES.28387.79	chr6	-	2632	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-8	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	246.144429822025	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGTTGTTGAATCAC	NA	False	NA	-29	True	AATAAA	-8	NA	47572000	47507223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509878_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.8	chr6	-	2988	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-331	130	-20	50	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTAGAACATCACCGAC	NA	False	NA	-8	True	AATAAA	-29	NA	47572295	47507202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ES.28387.80	chr6	-	3435	1	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	-4946	304	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	677	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCCCCAAAAAAGTTTAG	NA	False	NA	NA	False	NA	NA	NA	47536094	47532659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47532700_47536100
ES.28387.81	chr6	-	8060	1	NIC	ENSMUSG00000029687.17	novel	866	7	NA	NA	2	-31250	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCCACTTTACCGATCT	NA	False	NA	NA	False	NA	NA	NA	47572273	47564213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47564200_47572300
ES.28387.82	chr6	-	3051	1	Genic_Genomic	ENSMUSG00000029687.17	novel	NA	NA	NA	NA	-1	-35979	mono-exon	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGTGAGATATAAATAAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	47571993	47568942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_47568900_47572000
ES.28387.9	chr6	-	2713	21	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	6	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	290.577373516934	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTCCTAGAACATCA	NA	False	NA	-13	True	AATAAA	-24	NA	47571958	47507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47553676_47553744_47554477_47554602_47571827
ES.28388.1	chr6	+	290	1	Intergenic	novelGene_23641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAATAAAAATATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	47581804	47582094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47581800_47582100
ES.28389.1	chr6	+	175	1	Intergenic	novelGene_23642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAGTAGATTTAAT	NA	False	NA	NA	False	NA	NA	NA	47583922	47584097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47583900_47584100
ES.2839.1	chr10	+	158	1	Intergenic	novelGene_2162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	59742188	59742346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59742200_59742300
ES.28390.1	chr6	-	279	1	Intergenic	novelGene_23643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTCTTTGTAGTTATT	NA	False	NA	NA	False	NA	NA	NA	47607178	47606899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47606900_47607200
ES.28391.1	chr6	-	132	1	Intergenic	novelGene_23644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	47611188	47611056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47611100_47611200
ES.28392.1	chr6	+	1795	1	Intergenic	novelGene_23645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	47615877	47617672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47615900_47617700
ES.28393.1	chr6	-	3074	2	Intergenic	novelGene_23646	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTTGTTCTCTTTCCC	8828	False	NA	NA	False	AATAAA	-17	NA	47628074	47622883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47623936_47626052
ES.28394.1	chr6	-	90	1	Intergenic	novelGene_23647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCTCCGCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	47640688	47640598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47640600_47640700
ES.28395.1	chr6	-	174	1	Intergenic	novelGene_23648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACCCGAGGCCCAACA	NA	False	NA	NA	False	NA	NA	NA	47649333	47649159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47649200_47649300
ES.28396.1	chr6	-	212	1	Intergenic	novelGene_23649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCACACGCCCACAACA	NA	False	NA	NA	False	AAAACA	-34	NA	47653670	47653458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47653500_47653700
ES.28396.2	chr6	-	80	1	Intergenic	novelGene_23650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACATTTTTTTCACCCT	NA	False	NA	NA	False	NA	NA	NA	47653670	47653590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47653600_47653700
ES.28397.1	chr6	-	92	1	Intergenic	novelGene_23651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACCCTCCGCTCCTCACC	NA	False	NA	NA	False	NA	NA	NA	47657991	47657899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47657900_47658000
ES.28398.1	chr6	-	86	1	Intergenic	novelGene_23652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCACCCTCCGCTC	NA	False	NA	NA	False	NA	NA	NA	47662309	47662223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47662200_47662300
ES.28399.1	chr6	-	90	1	Intergenic	novelGene_23653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCCTCCGCTCCTCAC	NA	False	NA	-2	True	NA	NA	NA	47716904	47716814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47716800_47716900
ES.284.1	chr1	-	3091	13	Fusion	ENSMUSG00000067653.13_ENSMUSG00000079610.10	novel	2277	9	NA	NA	16	-1	multi-exon	FALSE	canonical	0	0	junction_9	22.1376690030565	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTGCCTCATGGGG	7042	False	NA	NA	False	ATTAAA	-18	NA	36586284	36569269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36575577_36575638_36578437_36578616_36580939_36581144_36581842_36581947_36585990
ES.284.10	chr1	-	865	4	NNC	ENSMUSG00000079610.10	novel	2109	4	NA	NA	-7	220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.1792659696229	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCACATGGGCAAAGATAAA	7007	False	NA	-9	True	AATAAA	-18	NA	36586319	36578220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36578616_36580939_36581144_36581842_36581947_36586157
ES.284.11	chr1	-	880	4	FSM	ENSMUSG00000079610.10	ENSMUST00000194894.4	664	4	4	-220	4	220	multi-exon	FALSE	canonical	3	25	junction_1	19.6015872373189	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCACATGGGCAAAGATAAA	7018	False	NA	-9	True	AATAAA	-18	NA	36586308	36578220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36578616_36580904_36581144_36581842_36581947_36586166
ES.284.2	chr1	-	2694	11	Fusion	ENSMUSG00000067653.13_ENSMUSG00000079610.10	novel	2277	9	NA	NA	4	-8	multi-exon	FALSE	canonical	0	0	junction_8	18.6496648763456	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCAGCCTGGTTGCCT	7018	False	NA	NA	False	ATTAAA	-11	NA	36586308	36569276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36580939_36581144_36581842_36581947_36586166
ES.284.3	chr1	-	3216	10	Fusion	ENSMUSG00000067653.13_ENSMUSG00000079610.10	novel	2277	9	NA	NA	-2357	-8	multi-exon	FALSE	canonical	0	0	junction_9	18.0787031109214	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCAGCCTGGTTGCCT	NA	False	NA	NA	False	ATTAAA	-11	NA	36578321	36569276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36575577_36575638_36577409
ES.284.4	chr1	-	3020	12	Fusion	ENSMUSG00000067653.13_ENSMUSG00000079610.10	novel	2277	9	NA	NA	20	-8	multi-exon	FALSE	canonical	0	0	junction_8	22.3828446703539	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTCAGCCTGGTTGCCT	7046	False	NA	NA	False	ATTAAA	-11	NA	36586280	36569276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36578437_36578616_36580939_36581144_36581842_36581947_36585990
ES.284.5	chr1	-	1376	11	Fusion	ENSMUSG00000067653.13_ENSMUSG00000079610.10	novel	2277	9	NA	NA	208	-148	multi-exon	FALSE	canonical	0	0	junction_8	21.7126691127553	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCTAATTTCTCTCTGG	7234	False	NA	NA	False	NA	NA	NA	36586092	36570554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36580939_36581144_36581842_36581947_36585990
ES.284.6	chr1	-	2682	4	FSM	ENSMUSG00000079610.10	ENSMUST00000207843.2	2646	4	-12	-24	0	24	multi-exon	FALSE	canonical	3	9	junction_3	29.9369708257569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGTGGTGGTTACAGA	7014	False	NA	NA	False	NA	NA	NA	36586312	36576563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36585990
ES.284.7	chr1	-	2676	4	NIC	ENSMUSG00000079610.10	novel	2646	4	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	27.1947707391615	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7030	False	NA	NA	False	NA	NA	NA	36586296	36576588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36578616_36580904_36581144_36581842_36581947_36585990
ES.284.8	chr1	-	2467	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	228	-586	2	-1	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7028	False	NA	NA	False	NA	NA	NA	36586298	36576588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ES.284.9	chr1	-	1811	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	218	80	4	-80	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACTTGCCTTAAGTAG	7018	False	NA	-3	True	ATTAAA	-14	NA	36586308	36577254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ES.2840.1	chr10	+	156	1	Intergenic	novelGene_2165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	59772660	59772816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59772700_59772800
ES.28400.1	chr6	-	93	1	Intergenic	novelGene_23654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCCTCCGCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	47725524	47725431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47725400_47725500
ES.28401.1	chr6	+	159	1	Intergenic	novelGene_23655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	47756297	47756456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47756300_47756500
ES.28402.1	chr6	-	110	1	FSM	ENSMUSG00000065701.3	ENSMUST00000083767.3	112	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAACTTACATCTCCCC	NA	False	NA	-3	True	NA	NA	NA	47765113	47765003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47765000_47765100
ES.28403.1	chr6	-	4768	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	69	-2438	3	2438	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTAATGGTTGTCTTCA	8959	False	NA	NA	False	AATATA	-42	NA	47790295	47770636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.10	chr6	-	2262	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	614.941008914225	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8961	False	NA	22	True	TTTAAA	-23	NA	47790293	47773075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776184_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.13	chr6	-	4646	7	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	1547	junction_4	290.343283411589	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTTTGCCTTTTAT	8937	False	NA	20	True	TTTAAA	-21	NA	47790317	47773077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47778024_47780364_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.15	chr6	-	2538	11	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	canonical	2	52	junction_7	681.261623754046	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8919	False	NA	17	True	TTTAAA	-18	NA	47790335	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47780958_47781133_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.16	chr6	-	2153	9	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	2	300	junction_8	490.098826131016	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8961	False	NA	17	True	TTTAAA	-18	NA	47790293	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47790150
ES.28403.17	chr6	-	2052	8	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	6909	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	755.240710377986	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	4794	False	NA	17	True	TTTAAA	-18	NA	47783389	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47782518_47782581_47783064
ES.28403.18	chr6	-	2284	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	90	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	616.139955241051	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	9046	False	NA	17	True	TTTAAA	-18	NA	47790208	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773140_47773207_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.19	chr6	-	2321	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	616.139955241051	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8949	False	NA	17	True	TTTAAA	-18	NA	47790305	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780651_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.2	chr6	-	176	1	Intergenic	novelGene_23656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTGGTAGGCTGCTA	7927	False	NA	NA	False	AAAAAG	-18	NA	47772757	47772581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47772600_47772800
ES.28403.20	chr6	-	3429	8	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	1547	junction_6	168.401609377156	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8932	False	NA	17	True	TTTAAA	-18	NA	47790322	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780845_47783439_47783579_47783939_47785278_47790150
ES.28403.21	chr6	-	2460	9	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-18	-6	intron_retention	FALSE	canonical	3	1547	junction_6	253.72610724953	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8938	False	NA	17	True	TTTAAA	-18	NA	47790316	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.23	chr6	-	2288	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	613.200347901619	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	8961	False	NA	17	True	TTTAAA	-18	NA	47790293	47773080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777905_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.25	chr6	-	2311	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_9	566.134870289779	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCATGTTGTTTGCCT	8961	False	NA	15	True	TTTAAA	-16	NA	47790293	47773082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785269_47790150
ES.28403.26	chr6	-	2299	11	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-25	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	584.627069164609	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCATGTTGTTTGCCT	8931	False	NA	15	True	TTTAAA	-16	NA	47790323	47773082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773172_47773222_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.27	chr6	-	1565	4	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	71	9457	5	1415	5prime_fragment	FALSE	canonical	3	1547	junction_1	325.430313414238	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAGTAAGTA	8961	False	NA	NA	False	NA	NA	NA	47790293	47782531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.3	chr6	-	2677	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	29	-307	29	307	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTCGGGGTGTGGGCTG	8919	False	NA	NA	False	AATAAA	-21	NA	47790335	47772767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.4	chr6	-	2580	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	-129	-52	-129	52	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTTTTTTATTTCTT	8761	False	NA	75	True	NA	NA	NA	47790493	47773022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.5	chr6	-	4529	6	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-2	0	intron_retention	FALSE	canonical	2	300	junction_5	590.505749336956	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8888	False	NA	23	True	TTTAAA	-24	NA	47790366	47773074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47778024_47780364_47780845_47783439_47783579_47783939_47784146_47790150
ES.28403.6	chr6	-	3911	9	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	16	-1	intron_retention	FALSE	canonical	3	1547	junction_6	259.525257682176	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8972	False	NA	22	True	TTTAAA	-23	NA	47790282	47773075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47775533_47776119_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.7	chr6	-	4542	8	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	1547	junction_5	276.193440049779	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8928	False	NA	22	True	TTTAAA	-23	NA	47790326	47773075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_47773838_47775298_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28403.8	chr6	-	2319	10	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	611.590236419738	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8961	False	NA	22	True	TTTAAA	-23	NA	47790293	47773075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790158
ES.28403.9	chr6	-	2170	12	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	724.472506878722	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTTTGCCTTTTATTT	8932	False	NA	22	True	TTTAAA	-23	NA	47790322	47773075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47773466_47773523_47773583_47773710_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ES.28404.1	chr6	+	5496	2	Intergenic	novelGene_23657	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAACAACAACAAAACCCA	9025	False	NA	NA	False	NA	NA	NA	47790683	47921976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47796136_47921932
ES.28404.10	chr6	+	5205	5	NIC	ENSMUSG00000062519.14	novel	2906	6	NA	NA	97	2064	intron_retention	FALSE	canonical	3	18	junction_2	3.89711431702997	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAATCTCTTTGCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	47812725	47846686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47812855_47817185_47817582_47835862_47836467_47840037_47840152_47842724
ES.28404.11	chr6	+	2504	5	NIC	ENSMUSG00000062519.14	novel	2906	6	NA	NA	112	-622	intron_retention	FALSE	canonical	3	18	junction_2	3.89711431702997	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAGAGACATGCTTGTG	NA	False	NA	7	True	CATAAA	-20	NA	47812740	47844000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47812855_47817185_47817582_47835862_47836467_47840037_47840152_47842724
ES.28404.12	chr6	+	4421	5	FSM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	125	3782	125	2067	multi-exon	FALSE	canonical	1	1	junction_1	10.0343161201947	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCTCTTTGCCATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	47812753	47846689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.13	chr6	+	3305	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	170	-569	139	569	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTGTTGTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	47812767	47845191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.14	chr6	+	2538	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	185	183	154	-183	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGACTTTGATAGCTT	NA	False	NA	NA	False	AATACA	-25	NA	47812782	47844439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.15	chr6	+	1568	1	ISM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	32015	4260	32015	1589	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGTGCATGACTGCT	8813	False	NA	NA	False	AATATA	-18	NA	47844643	47846211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47844600_47846200
ES.28404.16	chr6	+	1548	1	ISM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	34820	1475	34820	-1475	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATTCTTCTCTTT	NA	False	NA	NA	False	AAAACA	-10	NA	47847448	47848996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47847400_47849000
ES.28404.17	chr6	+	5243	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	330	0	-122	0	multi-exon	TRUE	canonical	3	24	junction_5	6.34388666033558	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCCCTTAACTTTTGG	NA	False	NA	NA	False	NA	NA	NA	47854467	47885419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ES.28404.18	chr6	+	3725	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	349	1499	-103	-1499	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGTCCGCTAGTGT	NA	False	NA	34	True	AATAAA	-34	NA	47854486	47883920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ES.28404.19	chr6	+	3759	10	NNC	ENSMUSG00000025821.10	novel	5573	8	NA	NA	-73	-1522	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7854150262039	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGATTGCATGTTCCC	NA	False	NA	11	True	AATAAA	-11	NA	47854516	47883897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47854771_47856473_47856610_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494_47881768_47881816
ES.28404.2	chr6	+	303	1	Intergenic	novelGene_23658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAGA	9040	False	NA	NA	False	NA	NA	NA	47790698	47791001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47790700_47791000
ES.28404.20	chr6	+	4378	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	383	812	-69	-812	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGGAAGACTAAAACC	NA	False	NA	NA	False	NA	NA	NA	47854520	47884607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ES.28404.21	chr6	+	3860	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	462	1251	10	-1251	multi-exon	FALSE	canonical	3	24	junction_5	6.34388666033558	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCATCATCTAAATCAT	NA	False	NA	NA	False	AATATA	-28	NA	47854599	47884168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ES.28404.22	chr6	+	3225	10	NNC	ENSMUSG00000025821.10	novel	5573	8	NA	NA	26	-1520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7854150262039	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGATTGCATGTTCCCAA	NA	False	NA	13	True	AATAAA	-13	NA	47854615	47883899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47854771_47856473_47856610_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494_47881913_47882398
ES.28404.23	chr6	+	3084	9	NNC	ENSMUSG00000025821.10	novel	5573	8	NA	NA	35	-1516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.176091036419	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATGTTCCCAAAGCT	NA	False	NA	17	True	AATAAA	-17	NA	47854624	47883903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494_47881913_47882398
ES.28404.24	chr6	+	3553	8	NNC	ENSMUSG00000025821.10	novel	5573	8	NA	NA	43	-1519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.8091953983938	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTGCATGTTCCCAAA	NA	False	NA	14	True	AATAAA	-14	NA	47854632	47883900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869794_47869909_47874748_47874863_47875827_47875942_47881494
ES.28404.25	chr6	+	4454	11	Fusion	ENSMUSG00000025821.10_ENSMUSG00000052763.8	novel	5573	8	NA	NA	2621	-12	multi-exon	FALSE	canonical	0	0	junction_7	59.1171717862078	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAATGTTCACA	NA	False	NA	12	True	AATAAA	-19	NA	47857210	47909561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494_47882696_47903440_47903831_47903953_47904081_47905983_47906065_47907644
ES.28404.26	chr6	+	1117	1	Intergenic	novelGene_23660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTGTTATATGT	2796	False	NA	NA	False	NA	NA	NA	47872779	47873896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47872800_47873900
ES.28404.27	chr6	+	2478	1	NIC	ENSMUSG00000025821.10	novel	5573	8	NA	NA	20060	7380	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGTAAAAAC	4666	False	NA	NA	False	NA	NA	NA	47874649	47877127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47874600_47877100
ES.28404.28	chr6	+	5680	6	Fusion	ENSMUSG00000025821.10_ENSMUSG00000052763.8	novel	2801	5	NA	NA	-15834	0	multi-exon	FALSE	canonical	0	0	junction_1	78.5951652457071	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	3900	False	NA	24	True	AATAAA	-31	NA	47881575	47909573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_47884501_47897452_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907647
ES.28404.3	chr6	+	1964	1	Antisense	novelGene_ENSMUSG00000094557.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGCAGGACTTACTGGA	NA	False	NA	NA	False	NA	NA	NA	47792368	47794332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_47792400_47794300
ES.28404.30	chr6	+	4249	4	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	126	6	126	-6	intron_retention	FALSE	canonical	3	164	junction_3	6.34209919681348	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATGTTCACAGGGTGT	NA	False	NA	18	True	AATAAA	-25	NA	47897535	47909567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983
ES.28404.31	chr6	+	3859	4	NNC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	-1133	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.1365107232747	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	False	NA	24	True	AATAAA	-31	NA	47902106	47909573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47903831_47903953_47904081_47905985_47906065_47907644
ES.28404.32	chr6	+	2516	4	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	6030	12	200	-12	3prime_fragment	FALSE	canonical	3	116	junction_3	26.8700576850888	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAATGTTCACA	NA	False	NA	12	True	AATAAA	-19	NA	47903439	47909561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_47903831_47903953_47904081_47905983_47906065_47907644
ES.28404.33	chr6	+	200	1	Intergenic	novelGene_23666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAATGGAAACTGG	NA	False	NA	NA	False	NA	NA	NA	47916318	47916518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_47916300_47916500
ES.28404.34	chr6	+	6834	4	NIC	ENSMUSG00000072653.15	novel	4419	6	NA	NA	0	-3	intron_retention	FALSE	canonical	2	2	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTGCGTGTTTGTGGC	NA	False	NA	NA	False	TATAAA	-13	NA	47920128	47930084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47920312_47922362_47922686_47922770_47926926_47927911
ES.28404.35	chr6	+	2432	1	NIC	ENSMUSG00000072653.15	novel	4419	6	NA	NA	65	-153	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCTTTCTAGACATAA	1885	False	NA	NA	False	AATAGA	-11	NA	47922495	47924927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47922500_47924900
ES.28404.4	chr6	+	2291	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	-10	625	-7	-625	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAACTAGAGACATGCTT	NA	False	NA	4	True	CATAAA	-17	NA	47812587	47843997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.5	chr6	+	6682	5	FSM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	-8	1654	-8	-1654	multi-exon	FALSE	canonical	1	1	junction_1	10.0343161201947	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	47812620	47848817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.6	chr6	+	5832	1	NIC	ENSMUSG00000062519.14	novel	3656	2	NA	NA	4	-2117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAGCTCATTCGCTCTC	NA	False	NA	NA	False	NA	NA	NA	47812632	47818464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_47812600_47818500
ES.28404.7	chr6	+	8716	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	39	-5849	8	0	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTATGTGGGTGTGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	47812636	47850471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.8	chr6	+	4934	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	46	-2074	15	2074	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCATCTGGTGCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	47812643	47846696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28404.9	chr6	+	2277	5	FSM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	19	6032	19	-183	multi-exon	FALSE	canonical	1	1	junction_1	10.0343161201947	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGACTTTGATAGCTT	NA	False	NA	NA	False	AATACA	-25	NA	47812647	47844439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47812855_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ES.28405.1	chr6	-	5805	5	Fusion	ENSMUSG00000094557.2_ENSMUSG00000051499.8	novel	3191	4	NA	NA	0	71	multi-exon	FALSE	non_canonical	0	0	junction_1	8.6421930087218	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	6083	False	NA	NA	False	NA	NA	NA	47807438	47792162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_47794032_47795091_47798636_47801974_47802131_47803895_47804023_47807329
ES.28405.2	chr6	-	3986	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	303	-1098	4	1098	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTAAGTCTACTCTGG	6023	False	NA	NA	False	AATAAA	-37	NA	47807498	47795101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
ES.28405.3	chr6	-	2865	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	328	-2	29	2	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGCGTTTGGGTTTGCTT	6048	False	NA	-5	True	AATACA	-22	NA	47807473	47796197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
ES.28405.4	chr6	-	3016	4	NNC	ENSMUSG00000051499.8	novel	3191	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.94422221866655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCGTTTGGGTTTGC	6060	False	NA	-7	True	AATACA	-20	NA	47807461	47796199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47798636_47801974_47802131_47803895_47804023_47807164
ES.28405.5	chr6	-	2662	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	316	213	17	-213	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGAGGTTTTTGTTCTT	2	True	NA	NA	False	NA	NA	NA	47807485	47796412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
ES.28405.6	chr6	-	2634	4	NNC	ENSMUSG00000051499.8	novel	3191	4	NA	NA	88	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.94422221866655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACTATGAAGAATTTTC	6171	False	NA	NA	False	TATAAA	-10	NA	47807350	47796470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_47798636_47801974_47802131_47803895_47804023_47807164
ES.28406.1	chr6	-	179	1	Intergenic	novelGene_23659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47834844	47834665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47834700_47834800
ES.28407.1	chr6	-	2142	1	Antisense	novelGene_ENSMUSG00000062519.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47849059	47846917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47846900_47849100
ES.28408.1	chr6	-	171	1	Intergenic	novelGene_23661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTTTTATTAGG	1965	False	NA	NA	False	NA	NA	NA	47874065	47873894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47873900_47874100
ES.28409.1	chr6	-	165	1	Intergenic	novelGene_23662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGAGTGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	47887812	47887647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47887600_47887800
ES.2841.1	chr10	+	2437	2	Intergenic	novelGene_2166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTCAACTTAATCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59819965	59822806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59820974_59821377
ES.2841.2	chr10	+	178	1	Intergenic	novelGene_2167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAACACA	NA	False	NA	NA	False	NA	NA	NA	59821273	59821451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59821300_59821500
ES.28410.1	chr6	-	314	1	Intergenic	novelGene_23663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTTGGCTTCTAG	NA	False	NA	NA	False	NA	NA	NA	47889334	47889020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47889000_47889300
ES.28410.2	chr6	-	171	1	Intergenic	novelGene_23664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47889334	47889163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47889200_47889300
ES.28411.1	chr6	-	182	1	Intergenic	novelGene_23665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGCATTA	NA	False	NA	NA	False	NA	NA	NA	47890749	47890567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47890600_47890700
ES.28412.1	chr6	-	6005	2	Antisense	novelGene_ENSMUSG00000052763.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCCACTGTGAGCTATA	NA	False	NA	NA	False	NA	NA	NA	47903508	47891746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47897682_47903438
ES.28412.2	chr6	-	2847	3	Antisense	novelGene_ENSMUSG00000052763.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGAGCAAGCCACTA	NA	False	NA	NA	False	NA	NA	NA	47907956	47903083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_47903829_47903951_47904077_47905979
ES.28413.1	chr6	+	2979	6	NNC	ENSMUSG00000045466.19	novel	2823	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.4360659460949	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTCTTGCCTTGACC	9722	False	NA	18	True	AATAAA	-23	NA	47930332	47942234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47930517_47932750_47933105_47934409_47934659_47938669_47938775_47939458_47939567_47940255
ES.28413.2	chr6	+	2748	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	10	3	10	0	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCCCTGTCTTGCCTTG	9723	False	NA	15	True	AATAAA	-20	NA	47930333	47942231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
ES.28413.3	chr6	+	2858	5	NNC	ENSMUSG00000045466.19	novel	2823	5	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0455931256497	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTAAAGTCCCTGTCTT	9723	False	NA	9	True	AATAAA	-14	NA	47930333	47942225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47930517_47932750_47933105_47934409_47934659_47939464_47939567_47940255
ES.28413.4	chr6	+	2865	5	FSM	ENSMUSG00000045466.19	ENSMUST00000140719.2	2823	5	-44	2	13	-2	multi-exon	FALSE	canonical	2	2	junction_3	12.1937483982572	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTCCCTGTCTTGCCT	9726	False	NA	13	True	AATAAA	-18	NA	47930336	47942229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_47930517_47932750_47933105_47934409_47934659_47939458_47939567_47940255
ES.28413.5	chr6	+	6780	5	NNC	ENSMUSG00000045466.19	novel	2823	5	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.0455931256497	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGTAAAGTCCCTGTCT	9750	False	NA	8	True	AATAAA	-13	NA	47930360	47942224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47930517_47932750_47933105_47934409_47938095_47938950_47939567_47940255
ES.28413.6	chr6	+	2636	6	NNC	ENSMUSG00000045466.19	novel	2761	5	NA	NA	-16	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	11.7643529358822	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGACGTGTAAAGTCCC	9752	False	NA	3	True	AATAAA	-8	NA	47930362	47942219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255_47941697_47941767
ES.28413.7	chr6	+	3329	4	NNC	ENSMUSG00000045466.19	novel	2761	5	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.8548533034381	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGTGTAAAGTCCCTGT	9795	False	NA	6	True	AATAAA	-11	NA	47930405	47942222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47930517_47932750_47933105_47938669_47939567_47940255
ES.28413.8	chr6	+	2535	5	NNC	ENSMUSG00000045466.19	novel	2761	5	NA	NA	2617	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.6543508897528	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGACGTGTAAAGTCCC	NA	False	NA	3	True	AATAAA	-8	NA	47932997	47942219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_47933105_47933932_47934162_47934409_47934537_47939458_47939567_47940255
ES.28414.1	chr6	-	154	1	Intergenic	novelGene_23667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	47960405	47960251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_47960300_47960400
ES.28415.1	chr6	+	4963	1	FSM	ENSMUSG00002075679.1	ENSMUST00020183001.1	93	1	-869	-4001	-869	4001	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATTTTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	48024767	48029730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48024800_48029700
ES.28416.1	chr6	-	3550	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-396	5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	48.5489443757534	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCCTGTTTGCTGTTC	NA	False	NA	2	True	AATAGA	-19	NA	48025444	48001133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565_48024621_48024919
ES.28416.10	chr6	-	3748	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	245	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	52.1197872426799	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGAGTGTTTCCTGTTTG	NA	False	NA	-4	True	AATAGA	-13	NA	48025600	48001139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48024919
ES.28416.11	chr6	-	2730	8	NNC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6416682386796	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48025886	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48001969_48002264_48002455_48002649_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ES.28416.12	chr6	-	3374	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-396	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.8126968566157	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48025444	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48001969_48002080_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
ES.28416.13	chr6	-	3647	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	394	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.2814301926887	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48025451	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006408_48014488_48014603_48018962_48019090_48020777_48021636_48024565_48024621_48024919
ES.28416.14	chr6	-	2842	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8944987203922	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48024735	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002361_48002649_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
ES.28416.15	chr6	-	3212	6	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-89	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	48.9432324228795	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48024817	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021630_48024560
ES.28416.16	chr6	-	3071	7	NNC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.4664832642105	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGAGTGTTTCCTGT	NA	False	NA	-7	True	AATAGA	-10	NA	48025858	48001142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48001450_48001571_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ES.28416.19	chr6	-	3115	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-63	132	-63	-132	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGGGGGCAGTGATTTG	NA	False	NA	0	True	AATAAA	-17	NA	48025908	48001270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ES.28416.2	chr6	-	3329	7	NNC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	-38	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	53.7959106252511	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTCCTGTTTGCTGTT	NA	False	NA	1	True	AATAGA	-18	NA	48025883	48001134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48025626
ES.28416.20	chr6	-	3115	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-121	-134	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGGGGCAGTGATT	NA	False	NA	-2	True	AATAAA	-15	NA	48024849	48001272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
ES.28416.21	chr6	-	3101	7	NNC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	52	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	53.7959106252511	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGGGGCAGTGATT	NA	False	NA	-2	True	AATAAA	-15	NA	48025793	48001272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48025626
ES.28416.23	chr6	-	3136	7	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	277	-134	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	51.8126968566157	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGGGGCAGTGATT	NA	False	NA	-2	True	AATAAA	-15	NA	48025568	48001272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919_48025018_48025361
ES.28416.24	chr6	-	4559	6	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	570	-134	intron_retention	FALSE	canonical	3	12	junction_5	44.4405220491389	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCACGGGGGCAGTGATT	NA	False	NA	-2	True	AATAAA	-15	NA	48024158	48001272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430
ES.28416.25	chr6	-	3062	6	NIC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	80	-141	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	46.5317096182807	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATCTGCACGGGGGC	NA	False	NA	-9	True	AATAAA	-8	NA	48025765	48001279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48002753_48006056_48006408_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ES.28416.3	chr6	-	3999	6	NIC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	249	3	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	38.9122088810183	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTTTCCTGTTTGCTGT	NA	False	NA	0	True	AATAGA	-17	NA	48025596	48001135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024565
ES.28416.4	chr6	-	3751	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	-655	15	142	2	multi-exon	FALSE	canonical	3	22	junction_5	40.7401521843009	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	-1	True	AATAGA	-16	NA	48025703	48001136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
ES.28416.5	chr6	-	3227	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	-41	-2	-41	2	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	-1	True	AATAGA	-16	NA	48025886	48001136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ES.28416.6	chr6	-	5977	6	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	-392	2	intron_retention	FALSE	canonical	3	12	junction_5	44.4405220491389	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGTTTCCTGTTTGCTG	NA	False	NA	-1	True	AATAGA	-16	NA	48025440	48001136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430
ES.28416.7	chr6	-	3651	8	NNC	ENSMUSG00000071477.11	novel	3111	6	NA	NA	398	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.5028956773557	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGTGTTTCCTGTTTGC	NA	False	NA	-3	True	AATAGA	-14	NA	48025447	48001138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48022430_48022534_48024565_48024621_48024919
ES.28416.9	chr6	-	3127	6	NNC	ENSMUSG00000071477.11	novel	3184	6	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	48.9432324228795	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGTGTTTCCTGTTTGC	NA	False	NA	-3	True	AATAGA	-14	NA	48024767	48001138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024605
ES.28417.1	chr6	+	2793	2	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTTGTTGATGTCATTC	NA	False	NA	NA	False	NA	NA	NA	48042890	48062143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_48042985_48059444
ES.28417.2	chr6	+	3887	2	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATCTTGTTGATGTCAT	NA	False	NA	NA	False	NA	NA	NA	48042890	48062141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_48042985_48058348
ES.28417.3	chr6	+	3237	2	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCTTGTTGATGTCATT	NA	False	NA	NA	False	NA	NA	NA	48042891	48062142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_48042985_48058998
ES.28417.4	chr6	+	3752	1	Intergenic	novelGene_23668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGTGTTAGCCATAAA	NA	False	NA	NA	False	NA	NA	NA	48045508	48049260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48045500_48049300
ES.28417.5	chr6	+	3276	1	Intergenic	novelGene_23670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTCTGAGGACCATAAGA	NA	False	NA	NA	False	NA	NA	NA	48053641	48056917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48053600_48056900
ES.28417.6	chr6	+	4494	1	Antisense	novelGene_ENSMUSG00000057691.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTGATGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	48057650	48062144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_48057600_48062100
ES.28418.1	chr6	-	4624	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-23	952	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.192182214774	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCTAGGTGCCACTT	1074	False	NA	NA	False	AATAAA	-12	NA	48063503	48038376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
ES.28418.11	chr6	-	4456	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-88	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.4747929913636	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTTTCATGGATTCC	962	False	NA	0	True	AATAAA	-15	NA	48063615	48039330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48062529
ES.28418.12	chr6	-	3443	8	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.6052270545151	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTTTCATGGATTCC	1106	False	NA	0	True	AATAAA	-15	NA	48063471	48039330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041506_48041655_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.14	chr6	-	3606	7	NNC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	50.062183554278	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTTTCATGGATTCC	1108	False	NA	0	True	AATAAA	-15	NA	48063469	48039330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041884_48043362_48043489_48044102_48044295_48059069_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.15	chr6	-	5660	5	NIC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	31	-3	intron_retention	FALSE	canonical	3	101	junction_1	17.1682847133894	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGTTTCATGGATTC	1128	False	NA	-1	True	AATAAA	-14	NA	48063449	48039331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.16	chr6	-	3635	6	NIC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-101	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	42.8532379173383	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGTTTCATGGATTC	949	False	NA	-1	True	AATAAA	-14	NA	48063628	48039331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48041887_48043362_48043489_48044102_48044295_48060026_48060109_48060239_48060540_48063248
ES.28418.18	chr6	-	3553	6	NNC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	58.3527205878184	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGCTGTTTCATGGAT	1032	False	NA	-3	True	AATAAA	-12	NA	48063545	48039333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041884_48044102_48044295_48059069_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.19	chr6	-	1489	6	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-39	94	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	43.2961892087514	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTTCGTAACTGATTTA	1011	False	NA	NA	False	NA	NA	NA	48063566	48043050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
ES.28418.2	chr6	-	3753	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	-91	-14	-91	14	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTCTTAGATATTCAT	959	False	NA	16	True	AATAAA	-31	NA	48063618	48039314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.20	chr6	-	1479	6	ISM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	-94	3742	-94	74	5prime_fragment	FALSE	canonical	3	96	junction_1	16.8760184877832	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGCTCATTCCCTG	956	False	NA	NA	False	NA	NA	NA	48063621	48043070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.21	chr6	-	1255	6	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	20	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.6294885829449	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAATAAAAA	1117	False	NA	NA	False	NA	NA	NA	48063460	48043170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48043489_48044102_48044280_48059080_48059202_48060026_48060154_48060239_48060540_48063248
ES.28418.22	chr6	-	5730	1	Intergenic	novelGene_23669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTTGTTTTTCTCTTG	NA	False	NA	NA	False	AATAAA	-30	NA	48053012	48047282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48047300_48053000
ES.28418.23	chr6	-	7484	4	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	9	5514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.7307353999787	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACGTCTACTAGAGT	1106	False	NA	NA	False	AATAGA	-13	NA	48063471	48053041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48059202_48060026_48060109_48060239_48060540_48062529
ES.28418.3	chr6	-	6203	5	NIC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	9	13	intron_retention	FALSE	canonical	2	2	junction_3	43.7342828911141	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTCTTAGATATTCA	1106	False	NA	15	True	AATAAA	-30	NA	48063471	48039315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48041887_48043362_48043489_48044102_48044295_48060026_48060109_48060239
ES.28418.4	chr6	-	3726	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-18	12	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.192182214774	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCATTCTTAGATATTC	1032	False	NA	14	True	AATAAA	-29	NA	48063545	48039316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
ES.28418.6	chr6	-	6438	6	ISM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	-81	0	-81	0	intron_retention	FALSE	canonical	3	21	junction_1	39.8778133803748	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	969	False	NA	2	True	AATAAA	-17	NA	48063608	48039328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239
ES.28418.8	chr6	-	3498	6	NIC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	47.1694816592254	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1074	False	NA	2	True	AATAAA	-17	NA	48063503	48039328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48041884_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ES.28418.9	chr6	-	3970	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.4747929913636	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1075	False	NA	2	True	AATAAA	-17	NA	48063502	48039328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48062904
ES.28419.1	chr6	+	3794	1	Intergenic	novelGene_23671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCGTCGTT	NA	False	NA	NA	False	NA	NA	NA	48301025	48304819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48301000_48304800
ES.2842.1	chr10	+	1240	6	FSM	ENSMUSG00000044475.15	ENSMUST00000219778.2	1230	6	19	-29	-15	29	multi-exon	FALSE	canonical	2	9	junction_5	94.044670237074	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTCCTTAAAGATTC	NA	False	NA	NA	False	ATTAAA	-22	NA	59838645	59862190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59861544
ES.2842.10	chr10	+	1428	10	NIC	ENSMUSG00000044475.15	novel	1473	11	NA	NA	-57	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	89.8220462915425	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGCTGTGGTCTGTG	NA	False	NA	24	True	AATAAA	-14	NA	59839091	59935806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59839239_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.11	chr10	+	1257	9	ISM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	4389	4	4389	-2	3prime_fragment	FALSE	canonical	3	221	junction_5	11.6833214455479	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGCTGTGGTCTGTG	NA	False	NA	24	True	AATAAA	-14	NA	59843537	59935806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.12	chr10	+	6560	1	Intergenic	novelGene_2171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCCCTCAGTACTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	59850970	59857530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59851000_59857500
ES.2842.13	chr10	+	1712	1	Intergenic	novelGene_2173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59859287	59860999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59859300_59861000
ES.2842.14	chr10	+	6209	1	Genic_Genomic	ENSMUSG00000044475.15	novel	NA	NA	NA	NA	20388	3584	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59859536	59865745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_59859500_59865700
ES.2842.15	chr10	+	178	1	Intergenic	novelGene_2175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	2232	False	NA	NA	False	NA	NA	NA	59919068	59919246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59919100_59919200
ES.2842.2	chr10	+	1464	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	-12	-2	-12	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGGTCTGTGCACG	NA	False	NA	28	True	AATAAA	-18	NA	59838648	59935810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.3	chr10	+	1357	10	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	69.3265666213622	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838655	59935808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.4	chr10	+	3553	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	6	-2109	6	2107	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAATTGCCAATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	59838666	59937917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.5	chr10	+	1499	10	ISM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	7	1435	7	-1435	5prime_fragment	FALSE	canonical	3	221	junction_7	13.2030673577893	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGACTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	59838667	59934373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914
ES.2842.6	chr10	+	3184	11	NNC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	7	2040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.4441906301324	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGAAATGGGGAGATT	NA	False	NA	NA	False	NA	NA	NA	59838667	59937850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527_59937086_59937288
ES.2842.7	chr10	+	2802	6	FSM	ENSMUSG00000044475.15	ENSMUST00000219778.2	1230	6	41	-1613	7	1613	multi-exon	FALSE	canonical	2	9	junction_5	94.044670237074	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCCCTTATGTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	59838667	59863774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59861544
ES.2842.8	chr10	+	4081	11	NNC	ENSMUSG00000044475.15	novel	1473	11	NA	NA	-102	2047	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	72.0639299511205	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGGGAGATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	59839046	59937857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59839698_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.2842.9	chr10	+	1548	11	FSM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	-78	3	-78	-1	multi-exon	FALSE	canonical	3	28	junction_1	64.3808201252516	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGCTGTGGTCTGTGC	NA	False	NA	25	True	AATAAA	-15	NA	59839070	59935807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_59839239_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ES.28420.1	chr6	+	175	1	Intergenic	novelGene_23672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	48336530	48336705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48336500_48336700
ES.28421.1	chr6	+	4148	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	-92	2639	-92	2	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372427	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.10	chr6	+	5787	18	NIC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	-6	-854	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	17.4127583182313	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACCGTAAGTGGTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	48372557	48395625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.11	chr6	+	3817	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	17.3132896931808	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372568	48393835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.12	chr6	+	4085	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	7	-1	intron_retention	FALSE	canonical	3	25	junction_1	12.9464039408633	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372572	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.13	chr6	+	3969	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	18.4310179356792	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCATTGGCTTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	48372575	48393837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.14	chr6	+	14181	10	NIC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	11	2	intron_retention	FALSE	canonical	3	49	junction_5	6.66666666666667	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372576	48393835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48386829_48388575_48390207_48390296_48391535_48392509
ES.28421.15	chr6	+	3620	18	NIC	ENSMUSG00000042810.15	novel	4000	18	NA	NA	11	-356	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	17.4127583182313	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTCTTTGCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	48372576	48393477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.16	chr6	+	3816	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	19.3962584987415	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372577	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.17	chr6	+	3882	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	12	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	22.4129226194627	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTGTCTAGAGTGAATA	NA	False	NA	NA	False	ACTAAA	-11	NA	48372577	48393725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389163_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.18	chr6	+	4365	16	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	12	2	intron_retention	FALSE	canonical	2	2	junction_1	17.067187492053	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372577	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.19	chr6	+	3988	18	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	18.0748156819846	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372582	48393833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390974_48391086_48391423_48391535_48392509
ES.28421.2	chr6	+	3907	18	NIC	ENSMUSG00000042810.15	novel	4000	18	NA	NA	12	-114	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	17.4127583182313	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGTTGTCTGTCTAGAG	NA	False	NA	NA	False	ACTAAA	-5	NA	48372531	48393719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.20	chr6	+	4088	18	NNC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6727788379929	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372584	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379695_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392513
ES.28421.21	chr6	+	3767	17	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	21.9370548387882	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTAAAGGCCATTGGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	48372586	48393831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.22	chr6	+	4053	19	NNC	ENSMUSG00000042810.15	novel	4000	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9634495342437	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372592	48393833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48378047_48378128_48379804_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.23	chr6	+	3823	17	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.509888212197	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372592	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386107_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.24	chr6	+	4404	17	NIC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	6	-106	intron_retention	FALSE	canonical	3	26	junction_1	11.8947204675015	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTCTAGAGTGAATACT	NA	False	NA	NA	False	ACTAAA	-13	NA	48372597	48393727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.26	chr6	+	4539	17	NNC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	12	2	intron_retention	FALSE	canonical	0	0	junction_1	17.1828402774396	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372603	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379789_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.27	chr6	+	3366	17	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	16	-113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	28.4939001147614	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTTGTCTGTCTAGAGT	NA	False	NA	NA	False	ACTAAA	-6	NA	48372607	48393720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48384606_48384757_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391426_48391535_48392509_48392823_48392916
ES.28421.28	chr6	+	4385	16	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_5	22.3232813199334	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372613	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383748_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.3	chr6	+	4019	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	-256	560	-4	2	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372543	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.30	chr6	+	4505	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-14	2	intron_retention	FALSE	canonical	3	25	junction_1	12.0802977508835	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372617	48393835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.31	chr6	+	3964	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	18.1790403666013	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372618	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390974_48391086_48391423_48391535_48392509
ES.28421.33	chr6	+	3885	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	20.7689547394388	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372631	48393833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379828_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.34	chr6	+	2388	14	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	2	-3272	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	17.6323398414398	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTTACAGCCTGTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	48372633	48390561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296
ES.28421.37	chr6	+	3883	18	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	22.1504762616048	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCATTGGCTTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	48372646	48393837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379817_48379945_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390974_48391086_48391423_48391535_48392509
ES.28421.38	chr6	+	3837	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	51	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.4681242874553	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372682	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386166_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390974_48391086_48391423_48391535_48392509
ES.28421.39	chr6	+	5615	18	NNC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	53	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6470588235294	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGCCATTGGCTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	48372684	48393835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48378047_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.4	chr6	+	4005	18	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.8569556155416	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTGTGGAAGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	48372546	48393843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379817_48379931_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.40	chr6	+	4408	17	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	57	-1	intron_retention	FALSE	canonical	2	3	junction_7	18.419482722107	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCATTGGCTTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	48372688	48393837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.41	chr6	+	5815	12	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-14	2	intron_retention	FALSE	canonical	3	4	junction_1	18.5886306672289	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372785	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48386829_48388575_48388729_48389207_48389361_48390011_48391086_48391423_48391535_48392509
ES.28421.42	chr6	+	3425	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	266	3004	-14	-358	multi-exon	FALSE	canonical	3	25	junction_1	12.8178616724737	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGGCTCTTTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	48372785	48393475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.43	chr6	+	3892	18	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4692183285777	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48372803	48393833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372947_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390974_48391086_48391423_48391535_48392509
ES.28421.44	chr6	+	8539	16	NIC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	1659	-356	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	18.3079824727418	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTCTTTGCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	48374458	48393477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.45	chr6	+	4556	17	NNC	ENSMUSG00000042810.15	novel	8380	18	NA	NA	-1959	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.7464785239213	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCATTGGCTTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	48379017	48393837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386085_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.46	chr6	+	4347	17	ISM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	6415	557	-1762	5	3prime_fragment	FALSE	canonical	3	39	junction_14	9.7112611822564	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTGTGGAAGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	48379214	48393843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.47	chr6	+	3984	12	NIC	ENSMUSG00000042810.15	novel	4000	18	NA	NA	898	0	intron_retention	FALSE	canonical	0	0	junction_4	20.213733977727	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGGCCATTGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	48381874	48393833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.48	chr6	+	3804	14	ISM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	9494	-26	1317	26	3prime_fragment	FALSE	canonical	3	39	junction_11	9.78526848328347	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGTGTTGGGTTGC	NA	False	NA	NA	False	NA	NA	NA	48382293	48394426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.49	chr6	+	6116	8	FSM	ENSMUSG00000042810.15	ENSMUST00000154536.4	5693	8	-3062	2639	2094	2	multi-exon	FALSE	canonical	3	59	junction_6	5.19418827505653	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48383070	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48391086_48391423_48391535_48392509
ES.28421.5	chr6	+	4018	18	NNC	ENSMUSG00000042810.15	novel	4323	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.8007214762541	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCCATTGGCTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	48372546	48393836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383761_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.51	chr6	+	3300	10	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	-1504	2	intron_retention	FALSE	canonical	3	39	junction_7	10.4562580942387	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48384628	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48384757_48385462_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.52	chr6	+	3753	1	ISM	ENSMUSG00000042810.15	ENSMUST00000114571.8	6695	18	20202	5	2452	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTTTGAGCAAGCTGA	NA	False	NA	NA	False	GATAAA	-19	NA	48392721	48396474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48392700_48396500
ES.28421.53	chr6	+	2537	1	FSM	ENSMUSG00002076877.1	ENSMUST00020182524.1	74	1	-2005	-458	-2005	458	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACGTGCCTGTGTGA	-5	True	NA	NA	False	AGTAAA	-17	NA	48395697	48398234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48395700_48398200
ES.28421.6	chr6	+	3983	18	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	18.4310179356792	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGGCTTCTGTGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	48372547	48393840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48379804_48379945_48380356_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.7	chr6	+	3883	17	NIC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	16.9036793332103	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCCATTGGCTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	48372548	48393836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48372822_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28421.9	chr6	+	3952	18	NNC	ENSMUSG00000042810.15	novel	6695	18	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.95469010078	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAAGGCCATTGGCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	48372549	48393832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48372822_48379804_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383914_48384644_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ES.28422.1	chr6	-	4513	1	NIC	ENSMUSG00000068551.13	novel	543	5	NA	NA	11824	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTAGACCGAATGTCC	NA	False	NA	0	True	NA	NA	NA	48409146	48404633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_48404600_48409100
ES.28423.1	chr6	-	3585	5	FSM	ENSMUSG00000068551.13	ENSMUST00000114561.9	3619	5	22	12	22	12	multi-exon	FALSE	canonical	0	0	junction_1	2.59807621135332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACCTTGAGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	48422737	48413558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48416389_48418880_48418995_48419558_48419673_48420345_48420422_48422286
ES.28424.1	chr6	+	4122	21	NIC	ENSMUSG00000029797.14	novel	15408	103	NA	NA	16164	-10370	intron_retention	FALSE	canonical	0	0	junction_1	0.3	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCACTCCTCCCATTAA	NA	False	NA	NA	False	CATAAA	-19	NA	48441326	48454054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48441596_48441722_48441874_48442388_48442543_48442665_48442721_48443222_48443334_48443608_48443804_48443890_48444019_48444531_48444698_48444770_48444925_48445390_48445455_48446090_48446149_48447402_48447526_48449327_48449499_48449582_48449748_48450315_48450496_48450595_48450719_48450798_48450929_48451083_48451210_48451365_48451458_48452291_48452466_48452721
ES.28425.1	chr6	+	3902	7	NIC	ENSMUSG00000029797.14	novel	15148	100	NA	NA	12	7	intron_retention	FALSE	canonical	0	0	junction_1	0.372677996249965	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGATTGTGTGGTCTC	2892	False	NA	NA	False	AATAAA	-23	NA	48470725	48478191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48470838_48471757_48471897_48472041_48474518_48475044_48475141_48475266_48475328_48475577_48475709_48477304
ES.28425.2	chr6	+	541	5	ISM	ENSMUSG00000029797.14	ENSMUST00000043676.12	15148	100	49950	4	4399	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGTGCTGACAAATGAT	7279	False	NA	NA	False	AATAAA	-12	NA	48475112	48478180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48475141_48475266_48475328_48475577_48475709_48477304_48477456_48478010
ES.28426.1	chr6	-	206	1	Intergenic	novelGene_23673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAGAGGAAAAGCAGCA	NA	False	NA	NA	False	NA	NA	NA	48479518	48479312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48479300_48479500
ES.28427.1	chr6	+	4256	7	NIC	ENSMUSG00000107476.4	novel	3551	8	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.32049379893857	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTCTTTATACTTCCT	2532	False	NA	NA	False	AATAAA	-17	NA	48481236	48511766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48481485_48485205_48485318_48488748_48489447_48491085_48491261_48492170_48492291_48504378_48504484_48508968
ES.28427.2	chr6	+	5451	6	NIC	ENSMUSG00000107476.4	novel	6065	7	NA	NA	-34	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.31740662898458	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTCTTTATACTTCC	2532	False	NA	NA	False	AATAAA	-16	NA	48481236	48511765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48481485_48485205_48485318_48501957_48502057_48504378_48504484_48505284_48507375_48508968
ES.28427.3	chr6	+	4197	7	NIC	ENSMUSG00000107476.4	novel	6065	7	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.70519807116437	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTCTTTATACTTCC	2569	False	NA	NA	False	AATAAA	-16	NA	48481273	48511765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48481485_48485205_48485318_48488748_48489447_48491085_48491261_48501957_48502057_48504378_48504484_48508968
ES.28427.4	chr6	+	6326	9	NNC	ENSMUSG00000107476.4	novel	3551	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.39791576165636	530	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTCTTTATACTTCC	2569	False	NA	NA	False	AATAAA	-16	NA	48481273	48511765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48481405_48485205_48485318_48485629_48485728_48488748_48489447_48491085_48491261_48492170_48492291_48504378_48504484_48505284_48507375_48508968
ES.28427.5	chr6	+	2013	4	NNC	ENSMUSG00000107476.4	novel	1776	6	NA	NA	10	-7997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.96655480858378	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTTGTGTTGGTCAT	2576	False	NA	8	True	NA	NA	NA	48481280	48493349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48481485_48485205_48485318_48488748_48489074_48491977
ES.28427.6	chr6	+	4450	7	NNC	ENSMUSG00000107476.4	novel	6065	7	NA	NA	13	834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.60675832036175	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCCCATTGTCCCCTG	2579	False	NA	NA	False	AGTAAA	-15	NA	48481283	48510272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48481485_48485205_48485318_48488748_48489074_48491977_48492291_48504378_48504484_48505284_48507375_48508968
ES.28427.7	chr6	+	2006	1	Intergenic	novelGene_23674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTGTGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	48495687	48497693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48495700_48497700
ES.28427.8	chr6	+	5118	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-4712	-73	-4712	73	mono-exon	FALSE	NA	NA	NA	NA	NA	521	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTTTTAATGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	48495739	48500857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48495700_48500900
ES.28427.9	chr6	+	2576	1	Intergenic	novelGene_23675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTGATATTTTTGGTG	NA	False	NA	NA	False	AATAAA	-26	NA	48497580	48500156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48497600_48500200
ES.28428.1	chr6	-	2219	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-39	2173	multi-exon	TRUE	non_canonical	0	0	junction_1	220.5	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCTGGAAAAATGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	48502063	48499314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500379_48500856_48501909_48501960
ES.28428.15	chr6	-	1968	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-39	2162	multi-exon	TRUE	non_canonical	0	0	junction_1	0	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	48502063	48499325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500383_48500861_48501669_48501959
ES.28428.16	chr6	-	2209	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-40	2162	multi-exon	FALSE	non_canonical	0	0	junction_1	220.5	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	48502064	48499325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500391_48500868_48501909_48501960
ES.28428.20	chr6	-	2162	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-29	2162	multi-exon	FALSE	non_canonical	0	0	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAAGGGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	48502053	48499325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48499735_48499822_48500391_48500868
ES.28428.26	chr6	-	2180	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-15	2160	multi-exon	FALSE	non_canonical	0	0	junction_1	220.5	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAATAAGGGC	NA	False	NA	NA	False	AATAAA	-13	NA	48502039	48499327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500391_48500870_48501909_48501960
ES.28428.27	chr6	-	1476	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-20	2160	multi-exon	FALSE	canonical	2	2	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAATAAGGGC	NA	False	NA	NA	False	AATAAA	-13	NA	48502044	48499327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500247_48501487
ES.28428.30	chr6	-	1119	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-15	619	multi-exon	FALSE	non_canonical	3	441	junction_1	0	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAAATTCTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	48502039	48500868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48501909_48501960
ES.28428.31	chr6	-	1173	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-18	-618	-18	618	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAAAATTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	48502042	48500869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48500900_48502000
ES.28428.32	chr6	-	938	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-7	617	multi-exon	FALSE	non_canonical	0	0	junction_1	0	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAAAAATTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	48502031	48500870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48501769_48501991
ES.28428.33	chr6	-	870	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-39	-294	-39	294	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGCATATTTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	48502063	48501193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48501200_48502100
ES.28428.34	chr6	-	706	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-39	182	multi-exon	FALSE	non_canonical	3	441	junction_1	0	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATTTATGTTTTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	48502063	48501305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48501909_48501960
ES.28428.35	chr6	-	751	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-33	-181	-33	181	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAATTTATGTTTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	48502057	48501306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48501300_48502100
ES.28428.4	chr6	-	2272	2	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-40	2173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCTGGAAAAATGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	48502064	48499314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500379_48500856
ES.28428.6	chr6	-	2015	3	Genic_Genomic	ENSMUSG00000044211.10	novel	537	1	NA	NA	-6	2173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGCTGGAAAAATGGCT	NA	False	NA	NA	False	AATAAA	-26	NA	48502030	48499314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_48500391_48500868_48501769_48501991
ES.28429.1	chr6	+	1764	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	22	3	-1	-3	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGGCCTCTGCTCA	6226	False	NA	24	True	AATAAA	-32	NA	48514570	48518732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ES.28429.2	chr6	+	498	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	53	1238	3	700	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTTTCAGTTTCTGG	6257	False	NA	NA	False	NA	NA	NA	48514601	48517497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ES.2843.1	chr10	-	177	2	Intergenic	novelGene_2160	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATCTTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	59830078	59711996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59712020_59829924
ES.2843.10	chr10	-	2663	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	51	-1335	26	836	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTGGCGTGAATCATT	NA	False	NA	NA	False	NA	NA	NA	59838882	59822394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ES.2843.11	chr10	-	2616	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	70	-834	21	834	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTGGCGTGAATCA	NA	False	NA	NA	False	NA	NA	NA	59838887	59822396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ES.2843.12	chr10	-	1846	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	4	2	4	-2	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCAGGAGTTGAAACTA	NA	False	NA	0	True	AATAAA	-26	NA	59838953	59823232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ES.2843.13	chr10	-	1794	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	72	-487	-44	-12	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCCTTAATCTCAGGA	NA	False	NA	-10	True	AATAAA	-16	NA	59838861	59823242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ES.2843.14	chr10	-	1349	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	7	496	7	3	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGCGTATCCTTTCCG	NA	False	NA	-1	True	AATAAA	-21	NA	59838950	59823726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ES.2843.15	chr10	-	1401	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	-22	0	2	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838955	59823729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ES.2843.16	chr10	-	1167	3	FSM	ENSMUSG00000020107.11	ENSMUST00000182912.2	566	3	-32	-569	-7	-2	multi-exon	FALSE	canonical	3	24	junction_2	171	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCGCTGTGCGTATCCT	NA	False	NA	-6	True	AATAAA	-16	NA	59838940	59823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59838777
ES.2843.18	chr10	-	896	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	-27	983	-27	12	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGACAGTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	59838984	59824213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ES.2843.19	chr10	-	833	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	9	537	9	-22	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	59838924	59824266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ES.2843.2	chr10	-	157	1	Intergenic	novelGene_2163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	59762021	59761864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59761900_59762000
ES.2843.20	chr10	-	626	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	51	1175	2	2	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTTTTTCACATTCA	NA	False	NA	NA	False	NA	NA	NA	59838906	59824405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ES.2843.21	chr10	-	167	1	Intergenic	novelGene_2168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	59829149	59828982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59829000_59829100
ES.2843.22	chr10	-	2655	2	ISM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	94	6637	45	1801	5prime_fragment	FALSE	canonical	3	296	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACACCACCATTACCC	NA	False	NA	NA	False	NA	NA	NA	59838863	59829867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59832437_59838777
ES.2843.23	chr10	-	1421	2	ISM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	33	7932	9	506	5prime_fragment	FALSE	canonical	3	296	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAAATTCACTGGAGT	NA	False	NA	NA	False	NA	NA	NA	59838924	59831162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_59832437_59838777
ES.2843.24	chr10	-	283	1	Intergenic	novelGene_2169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAACCCATGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	59835344	59835061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59835100_59835300
ES.2843.3	chr10	-	182	1	Intergenic	novelGene_2164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	59765712	59765530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59765500_59765700
ES.2843.4	chr10	-	4359	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	1	-2605	1	2605	multi-exon	FALSE	canonical	3	721	junction_1	4.5	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59787655	59782885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59786852_59787138_59787395_59787518
ES.2843.5	chr10	-	1791	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	-15	-21	-15	21	multi-exon	FALSE	canonical	3	721	junction_1	4.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAAGGGAGAGTGGT	NA	False	NA	17	True	AATAAA	-38	NA	59787671	59785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_59786852_59787138_59787395_59787518
ES.2843.8	chr10	-	2035	2	NIC	ENSMUSG00000020108.5	novel	1755	3	NA	NA	1	-6	intron_retention	FALSE	canonical	3	730	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTTGAGTCTCATCG	NA	False	NA	-10	True	AATAAA	-11	NA	59787655	59785496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_59787395_59787518
ES.2843.9	chr10	-	1737	3	NNC	ENSMUSG00000020108.5	novel	1755	3	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	365	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACACTTGAGTCTCATC	NA	False	NA	-11	True	AATAAA	-10	NA	59787655	59785497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_59786842_59787138_59787395_59787518
ES.28430.1	chr6	+	2895	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	21	-3	6	3	multi-exon	FALSE	canonical	3	10	junction_1	2.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGGTCATGGTATTTT	8300	False	NA	17	True	NA	NA	NA	48531750	48547659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48531917_48533888_48534029_48545070
ES.28430.2	chr6	+	2802	3	FSM	ENSMUSG00000073096.12	ENSMUST00000203627.2	666	3	53	-2189	53	-3	multi-exon	FALSE	canonical	1	2	junction_1	6.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTTGGTCTTGGTCATG	8365	False	NA	10	True	NA	NA	NA	48531815	48547652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48531896_48533888_48534029_48545070
ES.28431.1	chr6	+	3144	3	NNC	ENSMUSG00000052751.17	novel	3145	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	12.5	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGGTGTTCTTTTC	NA	False	NA	22	True	AATAAA	-20	NA	48570816	48576017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48570987_48571724_48571911_48573229
ES.28431.2	chr6	+	3070	3	FSM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	-13	0	4	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570820	48576015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48570987_48571795_48571911_48573226
ES.28431.4	chr6	+	2932	2	FSM	ENSMUSG00000052751.17	ENSMUST00000163452.7	2959	2	26	1	9	-1	multi-exon	FALSE	canonical	3	7	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGCTGGTGGTGTTCTT	NA	False	NA	19	True	AATAAA	-17	NA	48570842	48576014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48570987_48573226
ES.28431.5	chr6	+	3848	2	NNC	ENSMUSG00000052751.17	novel	3145	3	NA	NA	15	0	intron_retention	FALSE	canonical	3	26	junction_1	0	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570848	48576015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48571911_48573229
ES.28431.6	chr6	+	3924	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	34	-820	-15	820	multi-exon	FALSE	canonical	3	41	junction_2	5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATTCGGGTCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	48570858	48576836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48570987_48571724_48571911_48573226
ES.28431.9	chr6	+	4354	2	NNC	ENSMUSG00000052751.17	novel	989	2	NA	NA	122	0	intron_retention	FALSE	canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570995	48576015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48571059_48571724
ES.28432.1	chr6	+	2556	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	-88	1675	-88	-1675	multi-exon	FALSE	canonical	3	52	junction_2	4.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACTGTTCTTTCTGAA	NA	False	NA	12	True	AATGAA	-20	NA	48578908	48598486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48579055_48590111_48590194_48596158
ES.28432.2	chr6	+	2592	4	NNC	ENSMUSG00000007216.7	novel	4143	3	NA	NA	-28	-1680	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4236347876812	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTCACTGTTCTTT	NA	False	NA	7	True	AATGAA	-15	NA	48578968	48598481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48579055_48587584_48587686_48590111_48590194_48596158
ES.28432.3	chr6	+	6212	3	NNC	ENSMUSG00000007216.7	novel	4083	2	NA	NA	3790	-1683	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATGGTGTCACTGTTC	NA	False	NA	4	True	AATGAA	-12	NA	48586261	48598478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_48586749_48586788_48590194_48596158
ES.28432.4	chr6	+	3697	1	Genic_Genomic	ENSMUSG00000007216.7	novel	NA	NA	NA	NA	6374	23	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTAGCCAGGCTCTC	2274	False	NA	NA	False	NA	NA	NA	48596487	48600184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_48596500_48600200
ES.28432.5	chr6	+	5357	5	Fusion	ENSMUSG00000053297.15_ENSMUSG00000007216.7	novel	3517	4	NA	NA	-4143	-1459	multi-exon	FALSE	canonical	0	0	junction_1	4.26468052730799	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTTTTAGTCCATCCAA	869	False	NA	NA	False	AATAAA	-16	NA	48599554	48609160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_48603054_48603897_48604048_48606061_48606939_48607105_48607250_48608473
ES.28432.6	chr6	+	2969	4	FSM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	-912	1460	-912	-1460	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTAGTCCATCCA	763	False	NA	NA	False	AATAAA	-15	NA	48602785	48609159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48604048_48606061_48606939_48607105_48607250_48608473
ES.28432.7	chr6	+	3201	4	FSM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	320	-4	-139	0	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATGTGGAGCGGTCC	1995	False	NA	NA	False	AATAAA	-15	NA	48604017	48610623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48604048_48606061_48606939_48607105_48607250_48608473
ES.28432.8	chr6	+	4582	3	ISM	ENSMUSG00000053297.15	ENSMUST00000095938.10	3517	4	947	2	-224	-2	3prime_fragment	FALSE	canonical	3	5	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGATTTTATGTGGAG	2622	False	NA	NA	False	AATAAA	-9	NA	48604644	48610617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48606939_48607105_48607250_48608473
ES.28432.9	chr6	+	1711	3	ISM	ENSMUSG00000053297.15	ENSMUST00000154570.2	3806	4	1189	1464	1189	-1460	3prime_fragment	FALSE	canonical	3	5	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTAGTCCATCCA	522	False	NA	NA	False	AATAAA	-15	NA	48606057	48609159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48606939_48607105_48607250_48608473
ES.28433.1	chr6	-	3397	2	ISM	ENSMUSG00000107640.2	ENSMUST00000203998.2	767	3	2174	-2826	2174	2826	3prime_fragment	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGGATAAGGGCAAT	NA	False	NA	NA	False	NA	NA	NA	48597117	48588080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_48591152_48596791
ES.28433.2	chr6	-	7039	3	NNC	ENSMUSG00000107640.2	novel	767	3	NA	NA	-68	2807	intron_retention	FALSE	canonical	1	2	junction_2	1.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATGTTTATTCT	NA	False	NA	NA	False	NA	NA	NA	48599359	48588099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_48588402_48590644_48596967_48598944
ES.28434.1	chr6	+	3657	6	FSM	ENSMUSG00000064262.8	ENSMUST00000203083.3	2579	6	-1	-1077	-1	2	multi-exon	FALSE	canonical	0	0	junction_4	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTCAGTCTCACTCT	NA	False	NA	NA	False	NA	NA	NA	48624166	48637811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48624220_48624340_48624462_48627119_48627778_48627994_48628038_48632975_48633603_48635656
ES.28435.1	chr6	+	1388	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	6	-10	6	10	multi-exon	FALSE	canonical	3	46	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGTCCCTCCCAC	1295	False	NA	27	True	NA	NA	NA	48653068	48655643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48653189_48654375
ES.28435.2	chr6	+	1740	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	54	-410	54	-5	multi-exon	FALSE	canonical	3	46	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGACATTGTGGCATAT	1343	False	NA	NA	False	AATAAA	-15	NA	48653116	48656043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_48653189_48654375
ES.28436.1	chr6	-	229	1	Intergenic	novelGene_23676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	AAAAAG	-34	NA	48661143	48660914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48660900_48661100
ES.28437.1	chr6	+	4037	2	NIC	ENSMUSG00000054435.17	novel	1804	3	NA	NA	-14	1	intron_retention	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGCTGGAATCTGTT	2036	False	NA	NA	False	AATAAA	-22	NA	48661497	48668995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_48663844_48667304
ES.28438.1	chr6	-	1613	3	FSM	ENSMUSG00000047867.12	ENSMUST00000053661.7	1594	3	-20	1	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTGCCTCTTTGTGAT	4173	False	NA	NA	False	AATAAA	-20	NA	48685179	48678516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48679758_48681355_48681441_48684892
ES.28439.1	chr6	+	1705	2	ISM	ENSMUSG00000090019.6	ENSMUST00000204168.2	1469	3	1933	0	-1173	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGTGTCGTTCT	9579	False	NA	NA	False	NA	NA	NA	48717942	48720728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_48718352_48719432
ES.2844.1	chr10	-	217	1	Intergenic	novelGene_2170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAACATATAGGCAGATA	8875	False	NA	NA	False	NA	NA	NA	59849914	59849697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59849700_59849900
ES.28440.1	chr6	+	180	1	Intergenic	novelGene_23677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTGAATGAATA	52	False	NA	NA	False	NA	NA	NA	48728240	48728420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48728200_48728400
ES.28441.1	chr6	-	1263	8	FSM	ENSMUSG00000029810.16	ENSMUST00000101429.11	1238	8	97	-122	-40	110	multi-exon	FALSE	canonical	0	0	junction_3	0.699854212223765	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACTTGTGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	48817954	48810641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48811074_48811440_48811561_48812378_48812610_48812839_48812897_48813160_48813272_48815105_48815300_48817294_48817388_48817929
ES.28441.2	chr6	-	1108	7	FSM	ENSMUSG00000029810.16	ENSMUST00000166247.8	1414	7	290	16	-6	-4	multi-exon	FALSE	canonical	0	0	junction_3	0.687184270936277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATACCCTCTCACAG	NA	False	NA	NA	False	GATAAA	-15	NA	48818018	48810767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_48811074_48811440_48811561_48812378_48812610_48812839_48812897_48813160_48813272_48815105_48815300_48817929
ES.28442.1	chr6	-	178	1	Intergenic	novelGene_23678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48870823	48870645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48870600_48870800
ES.28443.1	chr6	+	172	1	Intergenic	novelGene_23679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	139	False	NA	NA	False	NA	NA	NA	48977391	48977563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_48977400_48977600
ES.28444.1	chr6	-	703	3	Intergenic	novelGene_23680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGTGCATTACTAGT	NA	False	NA	NA	False	AGTAAA	-23	NA	48999439	48995445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48995945_48997387_48997456_48999303
ES.28444.2	chr6	-	2923	1	Intergenic	novelGene_23681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTCAGCTTGTGTGCA	NA	False	NA	NA	False	AGTAAA	-15	NA	48998376	48995453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_48995500_48998400
ES.28445.1	chr6	+	2379	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-80	1402	-11	-1402	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGTGTGATTATTA	NA	False	NA	NA	False	ATTAAA	-11	NA	49013468	49033714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ES.28445.10	chr6	+	3831	9	NNC	ENSMUSG00000029816.11	novel	645	2	NA	NA	-4418	-1398	intron_retention	FALSE	canonical	0	0	junction_1	25.4923395356331	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGATTATTATATT	NA	False	NA	NA	False	ATTAAA	-15	NA	49019939	49033718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49019984_49020930_49021075_49022238_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ES.28445.12	chr6	+	2103	1	Genic_Genomic	ENSMUSG00000029816.11	novel	NA	NA	NA	NA	744	1919	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGATAAAACAAACAC	2124	False	NA	NA	False	NA	NA	NA	49025101	49027204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_49025100_49027200
ES.28445.2	chr6	+	3711	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-80	70	-11	-70	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGTGTATGTAACAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	49013468	49035046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ES.28445.3	chr6	+	1246	4	ISM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	-2	12109	-2	-2278	5prime_fragment	FALSE	canonical	3	70	junction_1	2.05480466765633	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTCTACATGTCTGT	NA	False	NA	NA	False	AATACA	-43	NA	49013546	49023007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238
ES.28445.4	chr6	+	4096	10	NIC	ENSMUSG00000029816.11	novel	3701	11	NA	NA	18	-1402	intron_retention	FALSE	canonical	3	68	junction_5	5.41602560309064	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGTGTGATTATTA	NA	False	NA	NA	False	ATTAAA	-11	NA	49013566	49033714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ES.28445.6	chr6	+	2318	7	NNC	ENSMUSG00000029816.11	novel	3701	11	NA	NA	-15	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	26.4323034687987	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGACTCCTGTCTTAAA	NA	False	NA	NA	False	AAAACA	-21	NA	49013583	49026259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025382_49025426
ES.28445.7	chr6	+	1637	7	NNC	ENSMUSG00000029816.11	novel	3701	11	NA	NA	-15	293	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	26.4323034687987	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGAAATCTCTCAC	NA	False	NA	NA	False	NA	NA	NA	49013583	49025578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025382_49025426
ES.28445.8	chr6	+	176	1	Intergenic	novelGene_23682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAACAAAGAG	NA	False	NA	NA	False	NA	NA	NA	49018092	49018268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49018100_49018300
ES.28445.9	chr6	+	2859	10	NNC	ENSMUSG00000029816.11	novel	645	2	NA	NA	-4478	-595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1313279297746	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGATTGATTGATTGAT	NA	False	NA	NA	False	NA	NA	NA	49019879	49034521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49019964_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ES.28446.1	chr6	+	796	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	19	2004	19	69	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCTACCTCGTG	314	False	NA	48	True	NA	NA	NA	49050747	49061681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ES.28446.10	chr6	+	5820	1	NIC	ENSMUSG00000029815.13	novel	2819	4	NA	NA	-3700	26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCCCTTTGATATGAC	196	False	NA	5	True	AATAAA	-14	NA	49055818	49061638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49055800_49061600
ES.28446.3	chr6	+	8320	3	NIC	ENSMUSG00000029815.13	novel	2819	4	NA	NA	-8	39	intron_retention	FALSE	canonical	3	781	junction_1	34.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACTGAGCCATCTGCT	340	False	NA	18	True	AATAAA	-27	NA	49050773	49061651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49051038_49052019_49059861_49061436
ES.28446.4	chr6	+	569	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	-7	2025	-7	48	multi-exon	FALSE	canonical	3	89	junction_1	380.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTGCTTGGTCACTA	341	False	NA	27	True	AATAAA	-36	NA	49050774	49061660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49051038_49059778_49059861_49061436
ES.28446.5	chr6	+	2839	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	52	-72	-1	72	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGCGGCTGGCACTTC	347	False	NA	NA	False	AGTAAA	-21	NA	49050780	49063757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ES.28446.6	chr6	+	3522	4	NIC	ENSMUSG00000029815.13	novel	2819	4	NA	NA	2	26	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	384.52076955897	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCCCTTTGATATGAC	350	False	NA	5	True	AATAAA	-14	NA	49050783	49061638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49051038_49052019_49052199_49056973_49059861_49061436
ES.28446.7	chr6	+	2573	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	7	7	7	-7	multi-exon	FALSE	canonical	3	89	junction_1	380.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAATAATTTTGCT	355	False	NA	NA	False	TATAAA	-16	NA	49050788	49063678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49051038_49059778_49059861_49061436
ES.28446.8	chr6	+	1593	2	NIC	ENSMUSG00000029815.13	novel	481	3	NA	NA	12	1259	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCAGAATTCTTTTTCA	360	False	NA	NA	False	NA	NA	NA	49050793	49058322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49051038_49056973
ES.28446.9	chr6	+	4273	1	Genic_Genomic	ENSMUSG00000029815.13	novel	NA	NA	NA	NA	3034	1251	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCACTCAGAATT	980	False	NA	NA	False	NA	NA	NA	49054041	49058314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_49054000_49058300
ES.28447.1	chr6	+	2115	14	Intergenic	novelGene_23683	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAGAAAAAAAAAAAAAA	2670	False	NA	NA	False	NA	NA	NA	49064772	49191949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49064815_49065362_49065495_49067908_49067987_49071075_49071193_49081109_49081234_49082503_49082640_49084275_49084401_49085859_49085995_49094085_49094368_49111628_49111688_49111776_49111831_49145401_49145452_49190199_49190264_49191232
ES.28447.2	chr6	+	5048	1	Antisense	novelGene_ENSMUSG00000029814.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACAGCAATGAACTTAT	3443	False	NA	NA	False	AATATA	-18	NA	49065545	49070593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_49065500_49070600
ES.28447.3	chr6	+	176	1	Intergenic	novelGene_23684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCCCA	NA	False	NA	NA	False	NA	NA	NA	49134999	49135175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49135000_49135200
ES.28447.4	chr6	+	1660	1	Intergenic	novelGene_23685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAGACAAATAAA	NA	False	NA	NA	False	AATAAA	-6	NA	49142280	49143940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49142300_49143900
ES.28447.5	chr6	+	177	1	Intergenic	novelGene_23686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	49161287	49161464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49161300_49161500
ES.28447.6	chr6	+	2114	1	Intergenic	novelGene_23687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTGCCTCTGGAAGC	NA	False	NA	NA	False	NA	NA	NA	49185128	49187242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49185100_49187200
ES.28447.7	chr6	+	4544	1	Intergenic	novelGene_23688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTGGAGTGTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	49185153	49189697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49185200_49189700
ES.28448.1	chr6	+	1244	1	Intergenic	novelGene_23689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAAAGGATAGCAAG	NA	False	NA	NA	False	AATAAA	-28	NA	49199013	49200257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49199000_49200300
ES.28449.1	chr6	+	177	1	Intergenic	novelGene_23690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAACAGAGGTAT	NA	False	NA	NA	False	NA	NA	NA	49212701	49212878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49212700_49212900
ES.2845.1	chr10	-	166	1	Intergenic	novelGene_2172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAAATT	2790	False	NA	NA	False	NA	NA	NA	59855999	59855833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59855800_59856000
ES.28450.1	chr6	-	4572	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-12	-215	-12	215	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATAGAAATGCTATCC	NA	False	NA	NA	False	TATAAA	-19	NA	49191903	49061941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.100	chr6	-	1791	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	173.406800233863	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4592	False	NA	-8	True	AATAAA	-11	NA	49240965	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221867_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ES.28450.102	chr6	-	1829	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.121743220432	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGGGATTGTCTCTT	4555	False	NA	-10	True	AATAAA	-9	NA	49241002	49220863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226099_49227792_49227957_49229315_49229450_49240771
ES.28450.103	chr6	-	2650	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	2710	-1572	2690	1572	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACAATTTATGAGCC	7303	False	NA	NA	False	NA	NA	NA	49238254	49235604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49235600_49238300
ES.28450.104	chr6	-	1963	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	1840	-15	1820	15	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTTCTGGGTGTGCTGT	6433	False	NA	NA	False	AATACA	-35	NA	49239124	49237161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49237200_49239100
ES.28450.105	chr6	-	2981	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	-1	808	-1	-808	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGCTGGAAAGATAGCT	4592	False	NA	17	True	NA	NA	NA	49240965	49237984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49238000_49241000
ES.28450.11	chr6	-	3655	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	268	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	191.87977004845	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTGTAGTATGTTTTC	NA	False	NA	-20	True	AATAAA	-19	NA	49190827	49062152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
ES.28450.12	chr6	-	5564	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-8	3	intron_retention	FALSE	canonical	3	409	junction_13	48.0854761622621	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTAGTATGTTTT	NA	False	NA	-21	True	AATAAA	-18	NA	49191646	49062153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.14	chr6	-	4076	16	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	3629	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	216.205416727293	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTAGTATGTTTT	NA	False	NA	-21	True	AATAAA	-18	NA	49187466	49062153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49182410_49182469_49183671_49183802_49187204
ES.28450.16	chr6	-	4305	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	143.395485654613	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTAGTATGTTT	NA	False	NA	-22	True	AATAAA	-17	NA	49191855	49062154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190206_49190262_49191230
ES.28450.18	chr6	-	3741	14	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	27808	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	146.628339083839	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTAGTATGTTT	NA	False	NA	-22	True	AATAAA	-17	NA	49163287	49062154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49163171
ES.28450.20	chr6	-	4334	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-125	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	143.630709154571	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTAGTATGTTT	NA	False	NA	-22	True	AATAAA	-17	NA	49191763	49062154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49068100_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.21	chr6	-	4182	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-90	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.829342049368	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTAGTATGTTT	NA	False	NA	-22	True	AATAAA	-17	NA	49191728	49062154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065490_49067905_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.23	chr6	-	3857	13	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	48929	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	152.748704304379	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTAGTATGTTT	NA	False	NA	-22	True	AATAAA	-17	NA	49142166	49062154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49141885
ES.28450.26	chr6	-	4054	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	147.495782709743	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191882	49062156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.27	chr6	-	3833	13	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	3631	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.724602056599	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49187464	49062156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064702_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49187204
ES.28450.28	chr6	-	4321	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	143.370879831553	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191873	49062156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094091_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.3	chr6	-	4922	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-572	-5	-572	5	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49192463	49062151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.32	chr6	-	3321	8	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	103	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	198.368858648813	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	NA	False	NA	-27	True	AATAAA	-12	NA	49191788	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49145403_49145453_49190200_49190262_49191230
ES.28450.34	chr6	-	3880	14	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	3631	-3	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_13	142.00462531012	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	NA	False	NA	-27	True	AATAAA	-12	NA	49187464	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49187204
ES.28450.35	chr6	-	4268	4	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	122175	3	1429	-3	3prime_fragment	FALSE	canonical	3	561	junction_2	21.483844059096	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	4023	False	NA	-27	True	AATAAA	-12	NA	49069716	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909
ES.28450.36	chr6	-	3754	13	Fusion	ENSMUSG00000029814.11_ENSMUSG00000029817.12	novel	4345	15	NA	NA	-9	-3	multi-exon	FALSE	canonical	0	0	junction_12	152.748704304379	926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	4603	False	NA	-27	True	AATAAA	-12	NA	49240954	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49240771
ES.28450.37	chr6	-	4697	6	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	108740	3	4883	-3	intron_retention	FALSE	canonical	3	524	junction_4	32.2899365127899	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	NA	False	NA	-27	True	AATAAA	-12	NA	49083151	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107
ES.28450.40	chr6	-	3821	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	3748	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	190.170398885434	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACAGCTTCTGTAGTA	NA	False	NA	-27	True	AATAAA	-12	NA	49187347	49062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49182410_49182469_49187204
ES.28450.44	chr6	-	4040	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	1	5	junction_12	147.044814647756	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCACAGCTTCTGTAG	NA	False	NA	-29	True	AATAAA	-10	NA	49191640	49062161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49190200_49190262_49191230
ES.28450.45	chr6	-	6615	11	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-445	-6	intron_retention	FALSE	canonical	0	0	junction_4	214.368491154834	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAACCACAGCTTCTGTA	NA	False	NA	-30	True	AATAAA	-9	NA	49192336	49062162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49065496_49067909_49067985_49071073_49071191_49082503_49082640_49084275_49085995_49094085_49094368_49111628_49111693_49145403_49145453_49190200_49190262_49191230
ES.28450.46	chr6	-	3787	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-510	1068	-510	-1068	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAATCAGCTTGAGTT	NA	False	NA	NA	False	AAGAAA	-29	NA	49192401	49063224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.47	chr6	-	2871	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	30	1444	30	-1444	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCATTGAAAAAGTAATT	NA	False	NA	NA	False	AATAAA	-26	NA	49191861	49063600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.49	chr6	-	3263	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-586	1668	-586	1237	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGTTGTCTCCTGTTTC	NA	False	NA	NA	False	AATAGA	-2	NA	49192477	49063824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.5	chr6	-	3782	8	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-205	5	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	190.173926837986	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49192096	49062151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
ES.28450.50	chr6	-	2311	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-8	1165	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	141.635202588357	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCAATTGTTGAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	49191646	49063896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085908_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.51	chr6	-	4841	5	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	116768	1748	-3978	1157	3prime_fragment	FALSE	canonical	3	524	junction_4	33.860005906674	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTCCTAAGTCCAATTG	NA	False	NA	NA	False	AATAAA	-12	NA	49075123	49063904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073
ES.28450.52	chr6	-	2176	15	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	277	1157	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	136.261752910061	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTCCTAAGTCCAATTG	NA	False	NA	NA	False	AATAAA	-12	NA	49190818	49063904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
ES.28450.53	chr6	-	2046	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	263	1011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	142.220581764915	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49190832	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190576
ES.28450.54	chr6	-	2960	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	-509	1894	-509	1011	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49192400	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.56	chr6	-	6342	1	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	753	1011	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	549	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	3347	False	NA	NA	False	AATATA	-42	NA	49070392	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064000_49070400
ES.28450.57	chr6	-	2361	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-107	1011	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.356718388491	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49191202	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064705_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085908_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
ES.28450.60	chr6	-	2207	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-8	1011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	186.209942959937	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49191646	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064697_49064816_49065363_49065496_49067909_49067985_49071073_49071184_49081103_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.61	chr6	-	2389	14	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	125	1011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	194.285856620703	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49191766	49064050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49068100_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49145403_49145453_49190200_49190262_49191230
ES.28450.63	chr6	-	1774	14	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	5100	984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	147.142767687849	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-15	NA	49185995	49064077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49185923
ES.28450.65	chr6	-	1496	8	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-98	984	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	190.173926837986	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-15	NA	49191736	49064077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
ES.28450.66	chr6	-	3755	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-124	983	intron_retention	FALSE	canonical	3	409	junction_13	48.0854761622621	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-14	NA	49191762	49064078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.67	chr6	-	2130	14	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-10	983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	193.021107470126	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-14	NA	49191648	49064078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064811_49065359_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49190200_49190262_49191230
ES.28450.68	chr6	-	1793	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	560	982	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	142.220581764915	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-13	NA	49190535	49064079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190503
ES.28450.69	chr6	-	1933	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	2	981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	142.220581764915	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-12	NA	49191636	49064080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191463
ES.28450.71	chr6	-	3297	1	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	5907	5503	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACACAAAAACTTGTGTAA	NA	False	NA	NA	False	NA	NA	NA	49082127	49078830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49078800_49082100
ES.28450.72	chr6	-	1773	10	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	128	18739	-125	3438	5prime_fragment	FALSE	canonical	3	409	junction_9	39.2374852266755	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTATTTTGTTGGTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	49191763	49080895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.73	chr6	-	6568	6	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	245	26285	-8	-4108	5prime_fragment	FALSE	canonical	3	409	junction_5	45.1415551349308	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGTTACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	49191646	49088441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.74	chr6	-	1154	7	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	262	-7821	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	237.357676654172	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGGTATTCATGTGA	NA	False	NA	NA	False	NA	NA	NA	49190833	49092154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49092546_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
ES.28450.75	chr6	-	1430	7	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-125	-7823	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	188.00391544386	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCATTGGTATTCATGT	NA	False	NA	NA	False	NA	NA	NA	49191763	49092156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49092546_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.76	chr6	-	717	4	FSM	ENSMUSG00000029814.11	ENSMUST00000203680.2	711	4	-8	2	-8	-2	multi-exon	FALSE	canonical	3	19	junction_1	219.654273803175	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGTGTGTGTGTC	NA	False	NA	-5	True	ATTAAA	-20	NA	49191646	49144848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49145040_49145403_49145453_49190200_49190262_49191230
ES.28450.77	chr6	-	2151	1	Intergenic	novelGene_23691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGTGAAGACCATTACA	NA	False	NA	NA	False	NA	NA	NA	49220855	49218704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_49218700_49220900
ES.28450.78	chr6	-	1842	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	-35	-8	-32	4	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTCTTTATTTGATAA	4558	False	NA	0	True	AATAAA	-19	NA	49240999	49220853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ES.28450.79	chr6	-	3639	7	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	1	3	intron_retention	FALSE	canonical	3	123	junction_6	150.460404536653	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4591	False	NA	-1	True	AATAAA	-18	NA	49240966	49220854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49221666_49221801_49221870_49222409_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
ES.28450.8	chr6	-	4173	15	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	-125	5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	141.635202588357	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTAGTATGTTTTCA	NA	False	NA	-19	True	AATAAA	-20	NA	49191763	49062151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085908_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ES.28450.82	chr6	-	1905	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	191.0065443905	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4573	False	NA	-1	True	AATAAA	-18	NA	49240984	49220854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229963_49230043_49240771
ES.28450.83	chr6	-	4505	7	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	8600	3	intron_retention	FALSE	canonical	2	7	junction_3	190.019004897463	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	4265	False	NA	-1	True	AATAAA	-18	NA	49232344	49220854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222542_49223782_49223899_49225919_49226109_49227796_49227957_49229315
ES.28450.84	chr6	-	6989	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	5910	3	intron_retention	FALSE	non_canonical	0	0	junction_7	200.722165579943	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTCTTTATTTGATA	1575	False	NA	-1	True	AATAAA	-18	NA	49235034	49220854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221867_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49233225_49233430
ES.28450.85	chr6	-	2422	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4567	False	NA	-4	True	AATAAA	-15	NA	49240990	49220857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
ES.28450.86	chr6	-	4119	3	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	14214	0	intron_retention	FALSE	non_canonical	0	0	junction_2	272	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	9879	False	NA	-4	True	AATAAA	-15	NA	49226730	49220857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221870_49222409_49225203_49226416
ES.28450.89	chr6	-	1764	8	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	185.408319387128	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4603	False	NA	-8	True	AATAAA	-11	NA	49240954	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223807_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ES.28450.90	chr6	-	1720	8	NNC	ENSMUSG00000029817.12	novel	1777	8	NA	NA	11083	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	191.352863493983	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	6748	False	NA	-8	True	AATAAA	-11	NA	49229861	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741
ES.28450.92	chr6	-	2151	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	180.182372889248	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4553	False	NA	-8	True	AATAAA	-11	NA	49241004	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229730_49230043_49240771
ES.28450.93	chr6	-	1870	9	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	213.889829994322	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4603	False	NA	-8	True	AATAAA	-11	NA	49240954	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240433_49240515_49240771
ES.28450.94	chr6	-	1864	9	NNC	ENSMUSG00000029817.12	novel	1799	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	218.442176273265	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4603	False	NA	-8	True	AATAAA	-11	NA	49240954	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240433_49240515_49240771
ES.28450.97	chr6	-	6162	7	ISM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	6933	4	6933	0	3prime_fragment	FALSE	canonical	3	74	junction_2	157.210050569294	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	2598	False	NA	-8	True	AATAAA	-11	NA	49234011	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315
ES.28450.98	chr6	-	2114	9	NNC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	181.788983095786	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4579	False	NA	-8	True	AATAAA	-11	NA	49240978	49220861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229741_49230043_49240771
ES.28451.1	chr6	-	133	1	Intergenic	novelGene_23692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAAAAACCAAACCAAA	4038	False	NA	NA	False	NA	NA	NA	49241519	49241386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_49241400_49241500
ES.28452.1	chr6	-	170	1	Intergenic	novelGene_23693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAGTTTGATA	3247	False	NA	NA	False	NA	NA	NA	49242310	49242140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_49242100_49242300
ES.28453.1	chr6	+	188	1	Intergenic	novelGene_23694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTGGGGGAGGTTCTGG	NA	False	NA	NA	False	NA	NA	NA	49262368	49262556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49262400_49262600
ES.28454.1	chr6	-	220	1	Intergenic	novelGene_23695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAAGCTGAACAAGCT	NA	False	NA	NA	False	NA	NA	NA	49265231	49265011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_49265000_49265200
ES.28455.1	chr6	+	95	1	Intergenic	novelGene_23696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAGACAAA	8302	False	NA	NA	False	NA	NA	NA	49271548	49271643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49271500_49271600
ES.28456.1	chr6	+	176	1	Intergenic	novelGene_23697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49277405	49277581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49277400_49277600
ES.28457.1	chr6	-	177	1	Intergenic	novelGene_23698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	49290617	49290440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_49290400_49290600
ES.28458.1	chr6	+	1593	4	NIC	ENSMUSG00000050786.9	novel	2372	4	NA	NA	-15	-806	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	28.0515398666257	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGCTGTTGGTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	49296225	49317706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49296415_49310844_49311232_49316196_49316267_49316759
ES.28458.2	chr6	+	2329	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	23	-1	-10	1	multi-exon	FALSE	canonical	3	46	junction_2	7.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATTTTTGGTTTGG	NA	False	NA	16	True	AATAAA	-20	NA	49296230	49318517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49296415_49310844_49311232_49316759
ES.28458.3	chr6	+	7837	2	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	43	-1	10	1	intron_retention	FALSE	canonical	3	61	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATTTTTGGTTTGG	NA	False	NA	16	True	AATAAA	-20	NA	49296250	49318517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_49296415_49310844
ES.28458.4	chr6	+	2382	4	NNC	ENSMUSG00000050786.9	novel	2351	3	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	20.7417989148054	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTTATTTTTGGTTT	NA	False	NA	14	True	AATAAA	-18	NA	49296263	49318515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49296415_49306349_49306438_49310844_49311232_49316759
ES.28458.5	chr6	+	1467	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	74	810	41	-806	multi-exon	FALSE	canonical	3	46	junction_2	7.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGGCTGTTGGTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	49296281	49317706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49296415_49310844_49311232_49316759
ES.28458.6	chr6	+	2811	1	Intergenic	novelGene_23699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGTATGAAATGGAA	NA	False	NA	NA	False	NA	NA	NA	49307879	49310690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49307900_49310700
ES.28459.1	chr6	+	282	1	Intergenic	novelGene_23700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTCTCTGTGT	8139	False	NA	NA	False	NA	NA	NA	49327467	49327749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49327500_49327700
ES.28459.2	chr6	+	175	1	Intergenic	novelGene_23701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATCTTC	8142	False	NA	NA	False	NA	NA	NA	49327470	49327645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49327500_49327600
ES.2846.1	chr10	-	1096	1	Intergenic	novelGene_2174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	59883198	59882102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59882100_59883200
ES.28460.1	chr6	+	1192	6	NNC	ENSMUSG00000047115.16	novel	1304	6	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.0820352836731	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAATTTAATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	49344709	49366149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355443_49359896_49360014_49365750
ES.28460.2	chr6	+	1338	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	-41	7	-41	0	multi-exon	FALSE	canonical	3	8	junction_5	14.4360659460949	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATACATAGGGTCAG	NA	False	NA	NA	False	ATTAAA	-7	NA	49344715	49366207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ES.28460.3	chr6	+	1322	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	15.8008438593218	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATACATAGGGTCAG	NA	False	NA	NA	False	ATTAAA	-7	NA	49344717	49366207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355443_49359896_49360014_49362309_49362390_49365750
ES.28460.4	chr6	+	1948	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-36	622	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	15.8008438593218	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGGCAGAACTGAGGG	NA	False	NA	NA	False	NA	NA	NA	49344720	49366836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355443_49359896_49360014_49362309_49362390_49365750
ES.28460.5	chr6	+	1408	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATACATAGGGTCAG	NA	False	NA	NA	False	ATTAAA	-7	NA	49344725	49366207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
ES.28460.6	chr6	+	3342	6	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	-22	-204	intron_retention	FALSE	canonical	3	5	junction_4	15.1736613907125	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTGTTTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	49344734	49365948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355443_49359896_49362390_49365750
ES.28460.7	chr6	+	1990	7	NNC	ENSMUSG00000047115.16	novel	2730	7	NA	NA	14	620	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATGGCAGAACTGAG	NA	False	NA	NA	False	NA	NA	NA	49344770	49366834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
ES.28460.8	chr6	+	3175	1	FSM	ENSMUSG00000047115.16	ENSMUST00000203182.2	1740	1	-1373	-62	854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49363039	49366214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49363000_49366200
ES.28461.1	chr6	+	4828	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-196	-1939	at_least_one_novel_splicesite	TRUE	canonical	2	90	junction_1	55.4635797409972	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTCATTCTATGGGTGC	4514	False	NA	NA	False	NA	NA	NA	49372341	49444347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402
ES.28461.10	chr6	+	2942	22	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-62	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	78.4592561479106	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCTGAAAATCATTCAT	111	False	NA	NA	False	AATAAA	-15	NA	49372475	49446428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.12	chr6	+	4190	7	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-61	-48437	intron_retention	FALSE	canonical	1	7	junction_6	106.838533414785	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTATTCCAGCACTGGAG	112	False	NA	NA	False	AAGAAA	-12	NA	49372476	49397849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394127
ES.28461.13	chr6	+	6291	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-59	-5	intron_retention	FALSE	canonical	2	6	junction_6	78.1134431452103	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCTGAAAATCATTCATA	114	False	NA	NA	False	AATAAA	-16	NA	49372478	49446429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402
ES.28461.14	chr6	+	3033	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-58	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.5965498574902	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	115	False	NA	NA	False	AATAAA	-27	NA	49372479	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.15	chr6	+	4229	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-55	-1694	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	55.9936063369496	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCAGTCTCAGTCTTTT	118	False	NA	NA	False	NA	NA	NA	49372482	49444592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402
ES.28461.16	chr6	+	1469	10	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-54	-45619	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	75.6161521709205	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTGTTTTTTACTT	119	False	NA	NA	False	AATAAA	-17	NA	49372483	49400667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309
ES.28461.17	chr6	+	3512	16	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-52	-1944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.2779858182149	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTACCTCATTCTATG	121	False	NA	NA	False	NA	NA	NA	49372485	49444342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49385986_49386146_49402629_49402753_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402
ES.28461.2	chr6	+	3287	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-156	1	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	54.4319696453353	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	17	True	NA	NA	False	AATAAA	-23	NA	49372381	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.20	chr6	+	3069	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-50	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	67.0869825162862	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	123	False	NA	NA	False	AATAAA	-27	NA	49372487	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.21	chr6	+	2836	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	74.6192185551268	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	124	False	NA	NA	False	AATAAA	-21	NA	49372488	49446434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49385986_49386146_49394122_49394482_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.22	chr6	+	2481	20	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-49	5	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.5748107857386	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	124	False	NA	NA	False	AATAAA	-27	NA	49372488	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.23	chr6	+	3294	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	-48	-9	-48	9	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTCTTTGCAATTTTG	125	False	NA	NA	False	AATAAA	-31	NA	49372489	49446444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.24	chr6	+	2523	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	64.4351612087686	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAAAATCATTCATATT	126	False	NA	NA	False	AATAAA	-18	NA	49372490	49446431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.25	chr6	+	3111	23	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-44	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	63.3819590046941	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	129	False	NA	NA	False	AATAAA	-27	NA	49372493	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.26	chr6	+	5707	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-42	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	64.5265682067096	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCTGAAAATCATTCATA	131	False	NA	NA	False	AATAAA	-16	NA	49372495	49446429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49389221_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.27	chr6	+	1394	11	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	92.986074226198	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	134	False	NA	NA	False	AATAAA	-21	NA	49372498	49446434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49442402_49442472_49446061
ES.28461.28	chr6	+	2341	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-36	1	combination_of_known_splicesites	FALSE	canonical	2	36	junction_17	69.6486996147429	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	137	False	NA	NA	False	AATAAA	-23	NA	49372501	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.29	chr6	+	2735	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-36	-3	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	53.746739604748	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAAAATCATTCATATT	137	False	NA	NA	False	AATAAA	-18	NA	49372501	49446431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.3	chr6	+	2548	21	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-70	5	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_19	68.9958513245543	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	103	False	NA	NA	False	AATAAA	-27	NA	49372467	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.30	chr6	+	2337	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	66.1970729650171	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	139	False	NA	NA	False	AATAAA	-21	NA	49372503	49446434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.31	chr6	+	2966	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-26	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	64.7195239479197	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCTGAAAATCATTCATA	147	False	NA	NA	False	AATAAA	-16	NA	49372511	49446429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.32	chr6	+	3647	24	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.9755225105566	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	153	False	NA	NA	False	AATAAA	-27	NA	49372517	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49373004_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.33	chr6	+	1537	10	ISM	ENSMUSG00000023403.15	ENSMUST00000163954.8	2988	23	-47	45620	-16	-45620	5prime_fragment	FALSE	canonical	2	108	junction_8	72.8109339231783	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTGTTTTTTACT	157	False	NA	NA	False	AATAAA	-16	NA	49372521	49400666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309
ES.28461.34	chr6	+	3936	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-16	-1948	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	55.9936063369496	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAGTTTACCTCATTC	157	False	NA	NA	False	NA	NA	NA	49372521	49444338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402
ES.28461.35	chr6	+	2590	21	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	2	36	junction_19	67.3606710180354	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	164	False	NA	NA	False	AATAAA	-23	NA	49372528	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.36	chr6	+	4456	21	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-9	-1697	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.9720610856097	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTCCAGTCTCAGTCT	164	False	NA	NA	False	NA	NA	NA	49372528	49444589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402
ES.28461.37	chr6	+	2828	21	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	76.0851496679871	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	167	False	NA	NA	False	AATAAA	-21	NA	49372531	49446434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.38	chr6	+	3876	23	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	5	-1934	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	77.1554859246215	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTATGGGTGCTATTC	178	False	NA	NA	False	NA	NA	NA	49372542	49444352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49442975
ES.28461.39	chr6	+	3112	23	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	7	5	combination_of_known_junctions	FALSE	canonical	2	36	junction_21	64.6919113060493	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	180	False	NA	NA	False	AATAAA	-27	NA	49372544	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.4	chr6	+	2383	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	56.8725064900417	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATCATTCATATTCTT	109	False	NA	NA	False	AATAAA	-21	NA	49372473	49446434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.41	chr6	+	3066	9	NNC	ENSMUSG00000023403.15	novel	2988	23	NA	NA	11	-45618	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	118.004700647898	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTTTTACTTT	184	False	NA	NA	False	AATAAA	-18	NA	49372548	49400668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49385142_49385247_49385316_49385349_49386146_49398617_49398734_49400309
ES.28461.42	chr6	+	3148	23	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	13	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	68.6458151228777	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	186	False	NA	NA	False	AATAAA	-27	NA	49372550	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.43	chr6	+	3158	23	ISM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	2456	-1	2425	1	3prime_fragment	FALSE	canonical	2	108	junction_7	49.3739316235495	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	2629	False	NA	NA	False	AATAAA	-23	NA	49374993	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.44	chr6	+	2627	21	NNC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	2425	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	68.2404572083159	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	2629	False	NA	NA	False	AATAAA	-22	NA	49374993	49446435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423416_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.45	chr6	+	6272	17	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	13489	-5	intron_retention	FALSE	canonical	3	36	junction_16	62.3620665448957	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCTGAAAATCATTCATA	NA	False	NA	NA	False	AATAAA	-16	NA	49386057	49446429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402
ES.28461.46	chr6	+	3119	19	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	16251	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5376091600697	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAAATCATTCATAT	NA	False	NA	NA	False	AATAAA	-17	NA	49388819	49446430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49389221_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.47	chr6	+	5102	1	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	20179	-48437	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTATTCCAGCACTGGAG	NA	False	NA	NA	False	AAGAAA	-12	NA	49392747	49397849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49392700_49397800
ES.28461.48	chr6	+	5563	1	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	-13003	-38229	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCTCGATCTTCAGAG	6918	False	NA	NA	False	NA	NA	NA	49402494	49408057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_49402500_49408100
ES.28461.5	chr6	+	2255	19	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	68.1419179921898	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCTGAAAATCATTCATA	109	False	NA	NA	False	AATAAA	-16	NA	49372473	49446429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.6	chr6	+	3310	25	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	77.4440210015524	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAAAATCATTCATATT	109	False	NA	NA	False	AATAAA	-18	NA	49372473	49446431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49388813_49388934_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.7	chr6	+	3076	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-64	5	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_21	66.1650827991485	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATATTCTTTGCAAT	109	False	NA	NA	False	AATAAA	-27	NA	49372473	49446440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
ES.28461.8	chr6	+	2660	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-63	1	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	55.816430581886	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	110	False	NA	NA	False	AATAAA	-23	NA	49372474	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ES.28461.9	chr6	+	2284	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-62	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_19	73.5115269759645	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATATTCTTTG	111	False	NA	NA	False	AATAAA	-23	NA	49372475	49446436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446160
ES.28462.1	chr6	+	190	1	Intergenic	novelGene_23702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACACTTTTATGAGAG	NA	False	NA	NA	False	NA	NA	NA	49736945	49737135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_49736900_49737100
ES.28463.1	chr6	+	212	1	Intergenic	novelGene_23703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAACACATCAAGGTTGC	NA	False	NA	NA	False	NA	NA	NA	50013235	50013447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_50013200_50013400
ES.28464.1	chr6	+	2817	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-90	-566	-82	214	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTTCAGTTTTGTTTTT	NA	False	NA	11	True	TATAAA	-12	NA	50087138	50176133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.11	chr6	+	4907	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-32	-2714	-24	2362	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGAGTCTGGTAATTT	NA	False	NA	105	True	CATAAA	-22	NA	50087196	50178281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.12	chr6	+	2572	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	-22	214	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTTCAGTTTTGTTTTT	NA	False	NA	11	True	TATAAA	-12	NA	50087198	50176133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.13	chr6	+	2184	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-18	-4	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTTGTAAGTTTTGA	NA	False	NA	15	True	CATAAA	-12	NA	50087202	50175574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.14	chr6	+	2090	15	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-17	47	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	537.111155029518	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAACAAGTCAGCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	50087203	50175354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50128918_50129004_50135661_50135815_50139565_50139716_50140401_50140630_50153856_50153899_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.15	chr6	+	1443	1	FSM	ENSMUSG00000038388.15	ENSMUST00000203415.2	3523	1	-56	2136	-17	-2136	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATACATTGCTCTAT	NA	False	NA	NA	False	ATTAAA	-10	NA	50087203	50088646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087200_50088600
ES.28464.16	chr6	+	2952	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-24	-767	-16	415	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCCAGCTATTCATAT	NA	False	NA	NA	False	NA	NA	NA	50087204	50176334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.17	chr6	+	1293	9	NNC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	-16	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.349528721663	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAACAAGTCAGCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	50087204	50175355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50135661_50135698_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.19	chr6	+	1779	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	-7	48	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAACAAGTCAGCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	50087213	50175355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.2	chr6	+	2096	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-88	153	-80	10	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGGCATTTTTATTGTG	NA	False	NA	NA	False	NA	NA	NA	50087140	50175414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.20	chr6	+	2728	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-3	214	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTTCAGTTTTGTTTTT	NA	False	NA	11	True	TATAAA	-12	NA	50087217	50176133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.21	chr6	+	6037	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-11	-3865	-3	3513	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTCTTTCTGTAA	NA	False	NA	23	True	AATATA	-41	NA	50087217	50179432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.22	chr6	+	2270	12	NNC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	2	9627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	430.761482198043	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTGTGTTGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	50087222	50185546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133_50175283_50184973
ES.28464.23	chr6	+	2112	12	FSM	ENSMUSG00000038388.15	ENSMUST00000204545.3	2418	12	-35	341	2	0	multi-exon	FALSE	canonical	3	15	junction_1	329.215822601587	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTAAGTTTTGATTTA	NA	False	NA	19	True	CATAAA	-16	NA	50087222	50175578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.24	chr6	+	1229	8	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	2	48	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	409.594722542532	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAACAAGTCAGCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	50087222	50175355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.25	chr6	+	6017	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	4	3510	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATATTGGTCTTTCTG	NA	False	NA	20	True	AATATA	-38	NA	50087224	50179429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.26	chr6	+	2038	14	NNC	ENSMUSG00000038388.15	novel	2222	14	NA	NA	-2	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	481.296400206849	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAACAAGTCAGCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	50087226	50175354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140627_50147695_50147789_50155368_50155501_50157155_50157256_50157570_50157640_50160691_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.28	chr6	+	2048	13	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_6	301.835910167539	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGCGTTCAAGCAT	NA	False	NA	1	True	GATAAA	-22	NA	50087229	50175560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140525_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.3	chr6	+	1988	12	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	-75	-234	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_11	310.924428117187	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACAAAAGAGCAATGAC	NA	False	NA	NA	False	NA	NA	NA	50087145	50173304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50172997
ES.28464.30	chr6	+	4785	12	FSM	ENSMUSG00000038388.15	ENSMUST00000204545.3	2418	12	-24	-2343	5	2343	multi-exon	FALSE	canonical	3	15	junction_1	329.215822601587	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGGACTAAGCCCTAGA	NA	False	NA	86	True	CATAAA	-3	NA	50087233	50178262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.31	chr6	+	2138	13	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	5	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	318.005885253018	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAGAAATGCGTTCAA	NA	False	NA	-3	True	GATAAA	-18	NA	50087233	50175556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160845_50171505_50171709_50173493_50173623_50175133
ES.28464.32	chr6	+	936	5	NNC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	5	6461	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	547.682560887235	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATAAAATAGCAGTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	50087233	50147076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50146882
ES.28464.33	chr6	+	3446	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	5	1123	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGTAATAGTGGTAATC	NA	False	NA	NA	False	AATAAA	-15	NA	50087233	50177042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.34	chr6	+	1096	8	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	5	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	404.15934420746	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50087233	50175356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139636_50171583_50171709_50173493_50173623_50175133
ES.28464.35	chr6	+	4901	14	NNC	ENSMUSG00000038388.15	novel	2222	14	NA	NA	5	2296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	408.497651597836	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATTGCTGACCATAGC	NA	False	NA	39	True	AATACA	-29	NA	50087233	50178215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50131425_50131523_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.37	chr6	+	1841	13	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	7	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	319.367462946508	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50087235	50175356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140525_50155365_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.39	chr6	+	4660	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	8	-2507	8	2155	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGGAGTATATTTACT	NA	False	NA	NA	False	NA	NA	NA	50087236	50178074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.4	chr6	+	2364	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-79	-124	-71	113	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGCTGTCATTCTTG	NA	False	NA	NA	False	AATGAA	-15	NA	50087149	50175691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.40	chr6	+	4772	1	FSM	ENSMUSG00000038388.15	ENSMUST00000203415.2	3523	1	-22	-1227	9	1227	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50087237	50092009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087200_50092000
ES.28464.41	chr6	+	4764	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	10	-2613	10	2261	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGCAAAAGTGTTTG	NA	False	NA	4	True	NA	NA	NA	50087238	50178180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.42	chr6	+	2096	14	NNC	ENSMUSG00000038388.15	novel	2222	14	NA	NA	11	47	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	410.251488752532	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCAACAAGTCAGCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	50087239	50175354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50114706_50114866_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.43	chr6	+	2214	14	FSM	ENSMUSG00000038388.15	ENSMUST00000166318.8	2222	14	21	-13	13	13	multi-exon	FALSE	canonical	2	4	junction_6	409.736760637548	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAGTACCCTTGCTTT	NA	False	NA	32	True	CATAAA	-29	NA	50087241	50175591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50153856_50153899_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.44	chr6	+	2309	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCCCATCTCTCTCTA	NA	False	NA	NA	False	GATAAA	-17	NA	50087241	50175913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.45	chr6	+	2367	14	NNC	ENSMUSG00000038388.15	novel	2222	14	NA	NA	14	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	408.497651597836	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAATGCTGTCATTCTT	NA	False	NA	131	True	AATGAA	-14	NA	50087242	50175690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50131425_50131523_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.46	chr6	+	2701	13	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	-13	213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	319.456787201163	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTTCAGTTTTGTTTT	NA	False	NA	10	True	TATAAA	-11	NA	50087244	50176132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157631_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.49	chr6	+	2977	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-11	492	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTCTGTTAAGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	50087246	50176411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.5	chr6	+	2011	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-59	-44	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCAGCCTTCTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	50087161	50175360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.50	chr6	+	1181	9	ISM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	23	17957	-6	17	5prime_fragment	FALSE	canonical	3	978	junction_6	69.3071740514645	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTACCTCACAACCA	NA	False	NA	NA	False	AAAAAG	-6	NA	50087251	50157610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570
ES.28464.51	chr6	+	2236	13	NNC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	5	113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	406.525205928926	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAATGCTGTCATTCTTG	NA	False	NA	NA	False	AATGAA	-15	NA	50087264	50175691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140627_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.52	chr6	+	1961	11	NNC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	445.185758981574	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGATTTAGTACCCT	NA	False	NA	26	True	CATAAA	-23	NA	50087265	50175585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155505_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.54	chr6	+	3585	13	NIC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	15	1128	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAGTGGTAATCTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	50087274	50177047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.55	chr6	+	2691	11	NIC	ENSMUSG00000038388.15	novel	2418	12	NA	NA	18	412	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTGCCAGCTATTCA	NA	False	NA	NA	False	NA	NA	NA	50087277	50176331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.56	chr6	+	2013	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	152	-4	-6	4	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATTTTGTAAGTTT	NA	False	NA	12	True	CATAAA	-9	NA	50087380	50175571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.57	chr6	+	2200	13	NIC	ENSMUSG00000038388.15	novel	1281	10	NA	NA	-198	-48	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	312.40984255017	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50087641	50175356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50088108_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.58	chr6	+	2955	13	NIC	ENSMUSG00000038388.15	novel	1281	10	NA	NA	-182	208	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	312.40984255017	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTATTACTTCAGTTTT	NA	False	NA	5	True	TATAAA	-6	NA	50087657	50176127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50088108_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.59	chr6	+	1920	13	NNC	ENSMUSG00000038388.15	novel	616	3	NA	NA	13684	-48	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	317.805266633516	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50101523	50175356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50101710_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.6	chr6	+	1942	12	FSM	ENSMUSG00000038388.15	ENSMUST00000204545.3	2418	12	-87	563	-50	-48	multi-exon	FALSE	canonical	3	15	junction_1	329.215822601587	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACAAGTCAGCCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	50087170	50175356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.60	chr6	+	1766	12	NNC	ENSMUSG00000038388.15	novel	616	3	NA	NA	33763	-46	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	331.464643540386	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAGTCAGCCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	50121602	50175358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50121699_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.61	chr6	+	1862	12	NNC	ENSMUSG00000038388.15	novel	616	3	NA	NA	33822	-54	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	331.464643540386	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCTAACTTTTTATG	NA	False	NA	-46	True	AATATA	-12	NA	50121661	50175513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50121699_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.62	chr6	+	239	1	Intergenic	novelGene_23705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCAGCACTTGGGAGAA	507	False	NA	NA	False	AAAAAG	-39	NA	50125810	50126049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_50125800_50126000
ES.28464.63	chr6	+	6140	2	NIC	ENSMUSG00000038388.15	novel	637	5	NA	NA	-1177	-642	intron_retention	FALSE	canonical	3	1142	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCAATTTGGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	50156102	50172896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_50160852_50171505
ES.28464.64	chr6	+	3799	3	FSM	ENSMUSG00000038388.15	ENSMUST00000167319.2	616	3	-3132	-51	-3132	-46	multi-exon	FALSE	canonical	3	1196	junction_2	36.5	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAAGTCAGCCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	50168263	50175358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50171709_50173493_50173623_50175133
ES.28464.65	chr6	+	3202	3	FSM	ENSMUSG00000038388.15	ENSMUST00000167319.2	616	3	-2315	-271	-2315	0	multi-exon	FALSE	canonical	3	1196	junction_2	36.5	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTAAGTTTTGATTTA	NA	False	NA	19	True	CATAAA	-16	NA	50169080	50175578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50171709_50173493_50173623_50175133
ES.28464.66	chr6	+	2209	1	Genic_Genomic	ENSMUSG00000038388.15	novel	NA	NA	NA	NA	4353	2038	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTGAGGGCATG	NA	False	NA	NA	False	ACTAAA	-14	NA	50175748	50177957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_50175700_50178000
ES.28464.67	chr6	+	5175	1	Antisense	novelGene_ENSMUSG00000029821.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTTCCCTGTGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	50177911	50183086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_50177900_50183100
ES.28464.68	chr6	+	5832	1	Antisense	novelGene_ENSMUSG00000029821.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGTGTTGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	50179715	50185547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_50179700_50185500
ES.28464.7	chr6	+	3701	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	-58	-1482	-50	1130	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGGTAATCTGCAGGC	NA	False	NA	NA	False	AATAAA	-22	NA	50087170	50177049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ES.28464.9	chr6	+	1900	12	NNC	ENSMUSG00000038388.15	novel	1896	14	NA	NA	-29	-266	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_11	399.095402749603	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	50087191	50173272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50172997
ES.28465.1	chr6	-	772	1	Intergenic	novelGene_23704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTGA	NA	False	NA	NA	False	AAAAAG	-45	NA	50097607	50096835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_50096800_50097600
ES.28466.1	chr6	-	1442	1	Antisense	novelGene_ENSMUSG00000038388.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGAATTTCCCACCCT	NA	False	NA	NA	False	NA	NA	NA	50153931	50152489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_50152500_50153900
ES.28467.1	chr6	-	7130	1	FSM	ENSMUSG00000029821.16	ENSMUST00000204417.2	4628	1	-3653	1151	-3653	-670	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATTGAAGAGATACTATT	NA	False	NA	NA	False	NA	NA	NA	50174148	50167018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50167000_50174100
ES.28468.1	chr6	-	4522	1	Genic_Genomic	ENSMUSG00000029821.16	novel	NA	NA	NA	NA	-10653	577	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	50181148	50176626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_50176600_50181100
ES.28468.2	chr6	-	4028	1	Genic_Genomic	ENSMUSG00000029821.16	novel	NA	NA	NA	NA	-10653	83	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	50181148	50177120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_50177100_50181100
ES.28469.1	chr6	-	2247	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	-112	-2	94	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	8654	False	NA	0	True	ATTAAA	-18	NA	50238861	50184380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ES.28469.3	chr6	-	1021	2	Genic_Genomic	ENSMUSG00000029821.16	novel	2929	10	NA	NA	1	-1231	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATATTATCTGTCTGT	8789	False	NA	NA	False	ATTAAA	-10	NA	50238726	50237591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_50237934_50238047
ES.2847.1	chr10	+	5054	10	NNC	ENSMUSG00000058297.17	novel	5238	11	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.23178657161089	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTGAGAAACCTTTGC	9410	False	NA	3	True	AATAAA	-16	NA	59942219	59971019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59942484_59957299_59957346_59957505_59957621_59959631_59959747_59961531_59961647_59961975_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
ES.2847.2	chr10	+	2027	10	NNC	ENSMUSG00000058297.17	novel	5238	11	NA	NA	-70	-1738	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.23178657161089	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGGTTTTGTTGCTGTTT	9410	False	NA	NA	False	NA	NA	NA	59942219	59967992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_59942484_59957299_59957346_59957505_59957621_59959631_59959747_59961531_59961647_59961975_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
ES.2847.3	chr10	+	194	1	Intergenic	novelGene_2176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAACAACAGTG	NA	False	NA	NA	False	NA	NA	NA	59958897	59959091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59958900_59959100
ES.2847.4	chr10	+	4423	5	ISM	ENSMUSG00000058297.17	ENSMUST00000121820.9	5238	11	19911	1	19662	-1	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTGAGAAACCTTTGC	NA	False	NA	3	True	AATAAA	-16	NA	59961951	59971019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
ES.2847.6	chr10	+	2676	5	ISM	ENSMUSG00000058297.17	ENSMUST00000165024.3	3699	11	19693	427	19693	-427	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACTCTCCGGGTGA	NA	False	NA	NA	False	CATAAA	-22	NA	59961982	59969303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
ES.28470.1	chr6	+	177	1	Intergenic	novelGene_23706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	50357127	50357304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_50357100_50357300
ES.28471.1	chr6	-	7032	24	NNC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	4.49111704647538	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGTCTTTGTTTTTC	NA	False	NA	0	True	AATAAA	-16	NA	50433127	50270306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329688_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.10	chr6	-	3472	24	NNC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.70570582344311	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTGTGGGTTACAA	NA	False	NA	NA	False	AATAAA	-15	NA	50433127	50273784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310267_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.12	chr6	-	3536	23	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	-113	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	3.69861488480697	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAATGTGTGGGTTAC	NA	False	NA	NA	False	AATAAA	-13	NA	50433294	50273786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.14	chr6	-	3189	24	NNC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	15413	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	4.47931604284853	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAATGTTAATGTGTGG	NA	False	NA	NA	False	AATAAA	-8	NA	50417728	50273791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50417688
ES.28471.15	chr6	-	3631	21	NIC	ENSMUSG00000029822.16	novel	3218	20	NA	NA	2	25	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	4.7903548929072	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTGGTAACAGCATG	NA	False	NA	NA	False	NA	NA	NA	50433148	50277168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313310_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.2	chr6	-	6869	23	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	3.69861488480697	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGTCTTTGTTTTTC	NA	False	NA	0	True	AATAAA	-16	NA	50433147	50270306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.3	chr6	-	6710	24	NNC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	25527	3	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_23	4.25154258672422	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGTCTTTGTTTTTC	NA	False	NA	0	True	AATAAA	-16	NA	50407614	50270306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50407538
ES.28471.4	chr6	-	6542	23	NNC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	25584	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	4.029847319873	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCCTTTGTCTTTGTTT	NA	False	NA	-3	True	AATAAA	-13	NA	50407557	50270309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50407538
ES.28471.5	chr6	-	4490	23	NNC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	0	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	4.34750807317031	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTGACTCGGATGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	50433141	50272754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329688_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.6	chr6	-	4257	24	NNC	ENSMUSG00000029822.16	novel	4039	22	NA	NA	25531	-89	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	4.25154258672422	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTGACTCGGATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	50407610	50272755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50407538
ES.28471.7	chr6	-	3424	22	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	10	95	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	4.35863882723768	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCCCAGATGCGTTAA	NA	False	NA	NA	False	TATAAA	-16	NA	50433171	50273683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50432804
ES.28471.8	chr6	-	3503	24	NIC	ENSMUSG00000029822.16	novel	3307	22	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	3.96439732175821	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTGGGTTACAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	50433148	50273781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ES.28471.9	chr6	-	3192	22	NIC	ENSMUSG00000029822.16	novel	2916	21	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	4.35863882723768	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTGTGGGTTACAA	NA	False	NA	NA	False	AATAAA	-15	NA	50433040	50273784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50432804
ES.28472.1	chr6	+	174	1	Intergenic	novelGene_23707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	50538759	50538933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_50538800_50538900
ES.28473.1	chr6	-	2148	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	5	970	5	-970	multi-exon	FALSE	canonical	3	4909	junction_2	335	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	50543513	50540512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.10	chr6	-	406	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	64	2653	64	21	multi-exon	FALSE	canonical	3	4909	junction_2	335	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTCTCATGGCT	NA	False	NA	NA	False	AAAAAG	-37	NA	50543454	50542195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.2	chr6	-	1382	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	66	1675	66	999	multi-exon	FALSE	canonical	3	4909	junction_2	335	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGTGGTCCTAAATTT	NA	False	NA	NA	False	TATAAA	-19	NA	50543452	50541217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.3	chr6	-	1404	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-62	1781	-62	893	multi-exon	FALSE	canonical	3	4909	junction_2	335	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTGCTCTTACCTTGA	NA	False	NA	80	True	TATAAA	-20	NA	50543580	50541323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.4	chr6	-	1086	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-33	2070	-33	604	multi-exon	FALSE	canonical	3	4909	junction_2	335	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAGGCCTTTTAAATTC	NA	False	NA	NA	False	ATTAAA	-19	NA	50543551	50541612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.5	chr6	-	787	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	44	2292	44	382	multi-exon	FALSE	canonical	3	4909	junction_2	335	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCAGTTTGTGTTCACT	NA	False	NA	NA	False	NA	NA	NA	50543474	50541834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.6	chr6	-	776	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-46	2393	-46	281	multi-exon	FALSE	canonical	3	4909	junction_2	335	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATGGTTTTATACTTA	NA	False	NA	NA	False	CATAAA	-24	NA	50543564	50541935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.7	chr6	-	634	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	-35	2524	-35	150	multi-exon	FALSE	canonical	3	4909	junction_2	335	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACGGTCTTTATTAAAGC	NA	False	NA	NA	False	AGTAAA	-20	NA	50543553	50542066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_50542366_50542471_50542649_50543395
ES.28473.9	chr6	-	617	3	NNC	ENSMUSG00000063694.6	novel	3123	3	NA	NA	192	139	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	2786.5	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAAAGTGGGTACGGTC	NA	False	NA	NA	False	AGTAAA	-9	NA	50543326	50542077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_50542366_50542471_50542649_50543174
ES.28474.1	chr6	-	3175	1	Genic_Genomic	ENSMUSG00000029828.5	novel	NA	NA	NA	NA	-116	-20272	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACGGAAAGCAGGAGACCC	694	False	NA	NA	False	NA	NA	NA	50573728	50570553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_50570600_50573700
ES.28475.1	chr6	+	250	1	Intergenic	novelGene_23708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	51362848	51363098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51362800_51363100
ES.28476.1	chr6	+	3089	1	Intergenic	novelGene_23709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51372601	51375690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51372600_51375700
ES.28476.2	chr6	+	362	3	Intergenic	novelGene_23710	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAAAAATTAAATA	NA	False	NA	NA	False	TTTAAA	-13	NA	51372609	51375570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51372673_51373262_51373364_51375372
ES.28477.1	chr6	-	924	3	NIC	ENSMUSG00000108236.2	novel	506	3	NA	NA	19	2	intron_retention	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTATTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	51379180	51377943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51378561_51378721_51379014_51379165
ES.28478.1	chr6	+	2555	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	10	-21	10	21	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGTCCAAAGAATACTT	NA	False	NA	NA	False	AATAAA	-38	NA	51409659	51435769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
ES.28478.2	chr6	+	2340	3	NIC	ENSMUSG00000029832.17	novel	2544	4	NA	NA	22	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTATTACAAAAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	51409671	51435743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_51410394_51433573_51433658_51434209
ES.28478.3	chr6	+	5535	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	50	-3041	-29	3041	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCCTAGTTGACTCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	51409699	51438789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
ES.28478.4	chr6	+	1803	3	ISM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	18296	-2	18217	2	3prime_fragment	FALSE	canonical	3	21	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATATTTTATTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	51427945	51435750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51428124_51433573_51433658_51434209
ES.28478.5	chr6	+	3891	1	Antisense	novelGene_ENSMUSG00000004980.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTTCCTTTAGAATTAT	3016	False	NA	NA	False	AATAAA	-15	NA	51435844	51439735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_51435800_51439700
ES.28479.1	chr6	-	3537	12	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	486	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	1927.31213939119	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTTTAAACAGTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	51446823	51437425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.10	chr6	-	3619	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-154	-1827	-32	-1	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGCACTGCTACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	51446906	51437912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.100	chr6	-	5913	8	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	6241	junction_5	696.406226747766	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446770	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443686_51443885_51444033_51444164
ES.28479.102	chr6	-	3407	10	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	62	junction_3	2275.51938447815	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441432_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.103	chr6	-	1597	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2681.25925146259	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.104	chr6	-	5833	10	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	885	junction_9	2027.05188834048	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446875	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.106	chr6	-	2876	7	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	69	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2557.32616982834	3293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51443578	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51441494_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474
ES.28479.11	chr6	-	3201	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_1	2925.13518794749	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGCACTGCTACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	51446845	51437912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.110	chr6	-	3420	9	NNC	ENSMUSG00000004980.17	novel	1542	11	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	2414.25583772723	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446874	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51442170_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.113	chr6	-	2273	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-5	0	intron_retention	TRUE	canonical	1	4	junction_1	2924.48198987289	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446869	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51439081_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.117	chr6	-	3530	10	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	2296.16534333889	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442249_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.119	chr6	-	787	6	ISM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	3632	0	24	0	3prime_fragment	FALSE	canonical	3	287	junction_2	3233.3970742858	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51443193	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121
ES.28479.12	chr6	-	3908	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	5712	junction_8	802.633623999767	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGCACTGCTACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	51446823	51437912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.120	chr6	-	3007	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	2809.11631122672	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446856	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443708_51443885_51444033_51444164_51444276_51446650
ES.28479.121	chr6	-	2670	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	18	junction_1	2175.44666907741	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTACTTGGTGTAATGC	NA	False	NA	-25	True	AATAAA	-13	NA	51446823	51438104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51439561_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.122	chr6	-	1541	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3352.7540178385	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTACTTGGTGTAATGC	NA	False	NA	-25	True	AATAAA	-13	NA	51446823	51438104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441464_51443148_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.124	chr6	-	3582	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	933	junction_2	2233.6085930482	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTTGGTGTAATG	NA	False	NA	-26	True	AATAAA	-12	NA	51446826	51438105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51444033_51444164_51444276_51446650
ES.28479.125	chr6	-	2780	10	NNC	ENSMUSG00000004980.17	novel	1542	11	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	2961.79093717898	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTTGGTGTAATG	NA	False	NA	-26	True	AATAAA	-12	NA	51446823	51438105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441142_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.128	chr6	-	1489	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2678.78505296711	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTTGGTGTAATG	NA	False	NA	-26	True	AATAAA	-12	NA	51446823	51438105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51440390_51440456_51441083_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.129	chr6	-	2988	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	2657.50796047726	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTTGGTGTAATG	NA	False	NA	-26	True	AATAAA	-12	NA	51446825	51438105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51440474_51441095_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.13	chr6	-	3269	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGCACTGCTACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	51446886	51437912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.132	chr6	-	1632	13	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3119.16980029231	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAAATTACTTGGTGTA	NA	False	NA	-29	True	AATAAA	-9	NA	51446827	51438108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.133	chr6	-	3318	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	2192.8288692919	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTTTTGTATC	NA	False	NA	-45	True	AATACA	-9	NA	51446823	51438124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442164_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.134	chr6	-	1438	10	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3271.15943125543	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTTTTGTATC	NA	False	NA	-45	True	AATACA	-9	NA	51446823	51438124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441471_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.135	chr6	-	2627	11	NIC	ENSMUSG00000004980.17	novel	1542	11	NA	NA	2	-91	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	2556.45567338845	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGGTAACATCAAATTAG	NA	False	NA	-136	True	AATAAA	-21	NA	51446823	51438215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.136	chr6	-	3364	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-92	intron_retention	FALSE	non_canonical	0	0	junction_1	2872.89623297329	3293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGGTAACATCAAATTA	NA	False	NA	-137	True	AATAAA	-20	NA	51446823	51438216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440456_51441068_51441186_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.137	chr6	-	2898	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	-96	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAAGGGTAACATCAA	NA	False	NA	-141	True	AATAAA	-16	NA	51446823	51438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.138	chr6	-	3420	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-96	intron_retention	FALSE	canonical	3	874	junction_10	2524.61263563344	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAAGGGTAACATCAA	NA	False	NA	-141	True	AATAAA	-16	NA	51446823	51438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.139	chr6	-	1483	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-1	-96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2681.25925146259	3293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAAGGGTAACATCAA	NA	False	NA	-141	True	AATAAA	-16	NA	51446826	51438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.14	chr6	-	1778	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTGCACTGCTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	51446887	51437913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.140	chr6	-	2135	7	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-109	-96	intron_retention	FALSE	canonical	0	0	junction_1	2586.88625034465	3292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAAAGGGTAACATCAA	NA	False	NA	-141	True	AATAAA	-16	NA	51443326	51438220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282
ES.28479.141	chr6	-	3263	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-97	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTAAAGGGTAACATCA	NA	False	NA	NA	False	AATAAA	-15	NA	51446823	51438221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.142	chr6	-	2780	10	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	18	-723	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGTGTATTCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	51446846	51438847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.143	chr6	-	5012	8	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	51	936	2	-723	intron_retention	FALSE	canonical	3	933	junction_2	2265.35596157713	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGTGTATTCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	51446823	51438847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.144	chr6	-	2651	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-121	-892	1	-723	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGTGTATTCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	51446873	51438847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.145	chr6	-	2659	9	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	29	936	-18	-723	5prime_fragment	FALSE	canonical	3	933	junction_2	2125.40431080183	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGTGTATTCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	51446845	51438847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.146	chr6	-	2705	10	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	8	-724	intron_retention	FALSE	canonical	3	874	junction_9	2983.31505063713	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTGTGTATTCATTCA	NA	False	NA	-1	True	AATAAA	-20	NA	51446856	51438848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.147	chr6	-	1454	11	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-51	745	-2	-724	5prime_fragment	FALSE	canonical	3	287	junction_1	2099.44196395137	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTGTGTATTCATTCA	NA	False	NA	-1	True	AATAAA	-20	NA	51446876	51438848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.148	chr6	-	5209	7	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-726	intron_retention	FALSE	canonical	3	933	junction_2	2409.24479292209	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCCTTGTGTATTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	51446823	51438850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51444033_51444164
ES.28479.149	chr6	-	6562	5	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	322	-727	intron_retention	FALSE	canonical	3	6516	junction_2	673.965874507011	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACCCTTGTGTATTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	51446430	51438851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.15	chr6	-	3142	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	2180.54453061615	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTGCACTGCTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	51446823	51437913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.150	chr6	-	1390	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	-728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2794.49956342813	3275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCTTGTGTATTCA	NA	False	NA	-5	True	AATAAA	-16	NA	51446823	51438852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442165_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.151	chr6	-	1323	10	ISM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	-44	749	-5	-728	5prime_fragment	FALSE	canonical	3	287	junction_1	2721.49734566638	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCTTGTGTATTCA	NA	False	NA	-5	True	AATAAA	-16	NA	51446869	51438852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.152	chr6	-	3292	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	-728	intron_retention	FALSE	non_canonical	0	0	junction_2	3135.99039035439	3275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCTTGTGTATTCA	NA	False	NA	-5	True	AATAAA	-16	NA	51446828	51438852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441180_51441527_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.153	chr6	-	5127	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-728	intron_retention	FALSE	canonical	3	6241	junction_5	677.308263920499	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCTTGTGTATTCA	NA	False	NA	-5	True	AATAAA	-16	NA	51446823	51438852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.154	chr6	-	3798	7	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-729	intron_retention	FALSE	canonical	3	5712	junction_6	910.853567936264	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCACCCTTGTGTATTC	NA	False	NA	-6	True	AATAAA	-15	NA	51446823	51438853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51444033_51444164_51444276_51446650
ES.28479.155	chr6	-	5802	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-5	-730	intron_retention	FALSE	canonical	3	6241	junction_4	704.135278050971	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCACCCTTGTGTATT	NA	False	NA	-7	True	AATAAA	-14	NA	51446869	51438854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.156	chr6	-	5992	7	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-18	-732	intron_retention	FALSE	canonical	3	6241	junction_3	758.380071819753	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTCCACCCTTGTGTA	NA	False	NA	-9	True	AATAAA	-12	NA	51446845	51438856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.157	chr6	-	7371	2	FSM	ENSMUSG00000004980.17	ENSMUST00000204090.2	766	2	-5683	-922	2	-733	multi-exon	FALSE	canonical	3	7812	junction_1	0	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCATTCCACCCTTGTGT	NA	False	NA	-10	True	AATAAA	-11	NA	51446823	51438857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440474_51441068
ES.28479.158	chr6	-	2433	10	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	2	1068	2	568	5prime_fragment	FALSE	canonical	3	5712	junction_9	757.172925761462	3267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGTTTTCCAATCTG	NA	False	NA	NA	False	AATAAA	-17	NA	51446823	51439171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.16	chr6	-	7815	6	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6241	junction_2	773.823649160453	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTGCACTGCTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	51446825	51437913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.160	chr6	-	1796	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-153	-5	-31	5	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATAGACTTTTTATTT	NA	False	NA	-9	True	AATAAA	-22	NA	51446905	51439734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.161	chr6	-	4992	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	885	junction_7	2281.33127979328	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446823	51439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.162	chr6	-	4126	10	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-59	0	-1	0	intron_retention	FALSE	canonical	3	6241	junction_6	638.611070030447	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446865	51439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.163	chr6	-	4010	9	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-117	0	-5	0	intron_retention	FALSE	canonical	3	933	junction_3	2136.34101620036	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446869	51439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.164	chr6	-	4149	10	ISM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	0	1639	0	0	intron_retention	FALSE	canonical	3	885	junction_9	2027.05188834048	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446827	51439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.165	chr6	-	4120	8	ISM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	2	1636	2	0	intron_retention	FALSE	canonical	3	933	junction_2	2265.35596157713	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446823	51439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.166	chr6	-	1806	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-80	2	-12	-2	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGTAATTATAGACTT	NA	False	NA	-16	True	AATAAA	-15	NA	51446886	51439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.168	chr6	-	5167	6	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6471	junction_2	719.715388191749	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGTAATTATAGACTT	NA	False	NA	-16	True	AATAAA	-15	NA	51446825	51439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.169	chr6	-	4242	9	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-2	1638	0	-2	intron_retention	FALSE	canonical	3	6241	junction_5	677.308263920499	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGTAATTATAGACTT	NA	False	NA	-16	True	AATAAA	-15	NA	51446827	51439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.17	chr6	-	1599	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-1	20	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAGTGTGAATCTTGTT	NA	False	NA	-1	True	AATAAA	-37	NA	51446875	51438080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.172	chr6	-	1908	10	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-44	1639	-5	-3	5prime_fragment	FALSE	canonical	3	5712	junction_9	757.172925761462	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446869	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.173	chr6	-	1610	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	62	junction_4	2175.24945925749	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441432_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.174	chr6	-	1704	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2133.97121817517	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446825	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440476_51441074_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.175	chr6	-	1641	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-126	3	-4	-3	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446878	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.177	chr6	-	1613	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3041.5466854875	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442167_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.184	chr6	-	1771	9	ISM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	-27	1639	12	-3	5prime_fragment	FALSE	canonical	3	933	junction_2	2125.40431080183	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446852	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.185	chr6	-	6064	5	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	6516	junction_2	673.965874507011	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.187	chr6	-	1589	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2954.65666533355	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446845	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440422_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.19	chr6	-	5972	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-24	18	intron_retention	FALSE	canonical	3	6241	junction_5	677.308263920499	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATAAGTGTGAATCTTG	NA	False	NA	-3	True	AATAAA	-35	NA	51446898	51438082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.190	chr6	-	1703	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2192.8288692919	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446826	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441518_51442154_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.194	chr6	-	2642	12	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	392	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	2603.77604691328	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446360	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51445287
ES.28479.196	chr6	-	1658	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	874	junction_10	2893.40520667258	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446859	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.197	chr6	-	2065	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-890	-3	intron_retention	FALSE	canonical	3	6471	junction_4	654.659126132502	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51444571	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.199	chr6	-	1586	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2449.81208144115	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441530_51443260_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.2	chr6	-	3198	3	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	1030	484	intron_retention	FALSE	canonical	3	933	junction_2	3439.5	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTTTTTAAACAGTGA	NA	False	NA	NA	False	AATAAA	-10	NA	51442187	51437427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158
ES.28479.20	chr6	-	3099	11	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-12	18	intron_retention	FALSE	canonical	3	615	junction_1	2007.26311180174	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATAAGTGTGAATCTTG	NA	False	NA	-3	True	AATAAA	-35	NA	51446886	51438082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.201	chr6	-	3563	11	ISM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	406	3	352	-3	3prime_fragment	FALSE	canonical	3	885	junction_10	1934.54594414297	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446400	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.203	chr6	-	1698	12	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	1	62	junction_4	2935.93364709853	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446875	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441432_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.204	chr6	-	1647	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3041.5466854875	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446825	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441215_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.206	chr6	-	1454	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2355.1775642985	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51442167_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.207	chr6	-	1691	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2133.97121817517	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440465_51441074_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.208	chr6	-	1620	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2313.16401877986	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446827	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442213_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.209	chr6	-	1694	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3065.13143111352	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446886	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51443169_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.21	chr6	-	3425	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-130	-1657	-8	18	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATAAGTGTGAATCTTG	NA	False	NA	-3	True	AATAAA	-35	NA	51446882	51438082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.211	chr6	-	4022	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	885	junction_8	2755.04209359857	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.212	chr6	-	1684	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3330.58270577387	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446820	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442170_51442222_51443121_51443198_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444274_51446650
ES.28479.215	chr6	-	1570	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2230.05811804907	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441420_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.216	chr6	-	1321	7	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2703.98843788619	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446852	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440459_51443294_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.217	chr6	-	1153	6	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2940.68974222035	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51443538_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.219	chr6	-	1830	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-762	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2358.11680359031	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51444443	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441095_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.22	chr6	-	5802	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	8	10	intron_retention	FALSE	canonical	3	933	junction_2	2265.35596157713	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCTTACACATAAGTGT	NA	False	NA	-11	True	AATAAA	-27	NA	51446856	51438090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.220	chr6	-	1516	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2449.81208144115	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441513_51443313_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.221	chr6	-	1684	12	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2930.10990965264	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446825	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441467_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.224	chr6	-	1695	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2195.63763175985	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446820	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443195_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.225	chr6	-	1622	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2192.8288692919	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441444_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.228	chr6	-	1679	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2133.97121817517	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446823	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441095_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.229	chr6	-	1742	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2195.63763175985	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTAATTATAGACT	NA	False	NA	-17	True	AATAAA	-14	NA	51446873	51439742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443189_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.23	chr6	-	3428	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446867	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.231	chr6	-	1684	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2770.66536413187	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446819	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444028_51444167_51444267_51446650
ES.28479.233	chr6	-	5052	7	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	14	-4	intron_retention	FALSE	canonical	3	6241	junction_3	758.380071819753	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446792	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.234	chr6	-	1600	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2309.76819423749	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446823	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441486_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.235	chr6	-	1496	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2871.47623667301	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446770	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441468_51443152_51443203_51443282_51443385_51443474_51443686_51443885_51444034_51444167_51444276_51446650
ES.28479.236	chr6	-	2752	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	5712	junction_7	851.363252528028	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446867	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.238	chr6	-	1621	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2309.76819423749	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTGTAATTATAGAC	NA	False	NA	-18	True	AATAAA	-13	NA	51446823	51439743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51443142_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.24	chr6	-	6726	7	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	6241	junction_3	758.380071819753	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.241	chr6	-	1774	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_8	3129.15563493642	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTGTGTAATTATAGA	NA	False	NA	-19	True	AATAAA	-12	NA	51446823	51439744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444274_51444370_51444407_51446650
ES.28479.242	chr6	-	1382	9	NNC	ENSMUSG00000004980.17	novel	1638	11	NA	NA	-331	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2303.04056833027	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTGTGTAATTATAGA	NA	False	NA	-19	True	AATAAA	-12	NA	51444012	51439744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440217_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885
ES.28479.243	chr6	-	5148	6	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	-5	intron_retention	FALSE	canonical	3	6471	junction_3	731.468659615708	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATTGTGTAATTATAGA	NA	False	NA	-19	True	AATAAA	-12	NA	51446825	51439744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51442222_51443121_51443385_51443474_51444033_51444164
ES.28479.246	chr6	-	1519	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	2430.8368415013	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446824	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.247	chr6	-	1623	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2966.86396347689	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446873	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441074_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444034_51444167_51444276_51446650
ES.28479.248	chr6	-	1897	11	ISM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	0	1647	0	-8	5prime_fragment	FALSE	canonical	3	874	junction_10	2524.61263563344	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446827	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.249	chr6	-	1601	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2309.76819423749	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446878	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441448_51443133_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.25	chr6	-	2925	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	1927.31213939119	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446886	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.252	chr6	-	1632	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	2192.8288692919	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446823	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441468_51442167_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.253	chr6	-	1574	10	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2297.7322636799	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446825	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442167_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.254	chr6	-	1728	12	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2916.53425878124	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446823	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443677_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.255	chr6	-	1711	11	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2192.8288692919	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAATTGTGTAATTAT	NA	False	NA	-22	True	AATAAA	-9	NA	51446875	51439747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441486_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.257	chr6	-	1459	9	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2355.1775642985	3248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAAATTGTGTAATTA	NA	False	NA	-23	True	AATAAA	-8	NA	51446852	51439748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440235_51440390_51440474_51442185_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.258	chr6	-	1448	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	-71	261	2	-221	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	3233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCTTTTTAATTGTTG	NA	False	NA	NA	False	NA	NA	NA	51446823	51440000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.26	chr6	-	7735	5	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	12	0	intron_retention	FALSE	canonical	3	6516	junction_2	673.965874507011	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446852	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.27	chr6	-	4134	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	5712	junction_8	796.513810300863	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446822	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.29	chr6	-	5862	1	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	-281	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51443962	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438100_51444000
ES.28479.3	chr6	-	4258	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	1	479	intron_retention	FALSE	canonical	3	874	junction_10	2524.61263563344	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAATTGTTTTTTAAAC	NA	False	NA	NA	False	AATAAA	-5	NA	51446873	51437432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.30	chr6	-	3559	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446878	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.31	chr6	-	3589	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	874	junction_10	2524.61263563344	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446872	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.32	chr6	-	3415	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	-48	-1639	10	0	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446854	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.34	chr6	-	3652	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	615	junction_1	2112.24372541512	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446826	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.35	chr6	-	3087	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	615	junction_1	2828.42684716294	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446856	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.36	chr6	-	3862	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	615	junction_1	2223.26046818069	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446820	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.37	chr6	-	6910	6	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6241	junction_3	576.003680543797	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446875	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885
ES.28479.39	chr6	-	3464	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	874	junction_9	2983.31505063713	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446867	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.4	chr6	-	6070	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	2	intron_retention	FALSE	canonical	3	6241	junction_5	677.308263920499	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCACTGCTACAACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	51446823	51437909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.40	chr6	-	3376	9	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	3003.87266707495	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441074_51441192_51442160_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.41	chr6	-	2937	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	615	junction_1	3124.10624819323	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446826	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.42	chr6	-	4468	9	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	1341	0	intron_retention	FALSE	non_canonical	0	0	junction_8	2303.04056833027	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51445411	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444034_51444164
ES.28479.43	chr6	-	2753	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-14	0	intron_retention	FALSE	canonical	3	34	junction_2	2616.06248187823	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446841	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.44	chr6	-	2898	10	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_1	2783.32051893258	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446886	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.45	chr6	-	3513	11	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	2948.4246641215	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441095_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.46	chr6	-	2974	10	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	2842.01122055804	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446868	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51440474_51441068_51441223_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.47	chr6	-	3559	11	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	2701.88755502519	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444426_51446650
ES.28479.48	chr6	-	2615	14	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_2	3010.5861526036	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446823	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.49	chr6	-	4286	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-18	0	intron_retention	FALSE	canonical	1	2	junction_3	3082.02623593769	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446845	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51439545_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.5	chr6	-	2990	12	NNC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2093.46237780208	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCACTGCTACAACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	51446823	51437909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.50	chr6	-	5442	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	615	junction_1	2107.75378654419	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446872	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.51	chr6	-	5317	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-15	0	intron_retention	FALSE	canonical	3	615	junction_1	2575.63569046556	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446842	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.52	chr6	-	2981	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-32	0	intron_retention	FALSE	canonical	3	615	junction_1	2652.833872589	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446906	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.53	chr6	-	8048	3	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7812	junction_1	249	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446875	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51444033_51444164
ES.28479.54	chr6	-	3197	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	-40	-1639	14	0	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446792	51438100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.55	chr6	-	1724	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-61	-1	-12	1	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446886	51438102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.56	chr6	-	5113	10	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_1	3127.574424019	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446823	51438102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.57	chr6	-	4393	8	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-3	1	intron_retention	FALSE	canonical	3	5712	junction_7	851.363252528028	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTGGTGTAATGCTT	NA	False	NA	-23	True	AATAAA	-15	NA	51446867	51438102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.58	chr6	-	3516	8	NIC	ENSMUSG00000004980.17	novel	1542	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	933	junction_2	2271.83276727161	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446878	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.59	chr6	-	2795	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2093.46237780208	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446822	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.6	chr6	-	3743	10	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	False	NA	NA	False	AATAAA	-16	NA	51446873	51437911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.60	chr6	-	2586	10	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_5	3310.82675139878	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446845	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51440474_51441068_51441192_51441407_51441486_51443264_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.62	chr6	-	2657	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	2179.9780297058	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51439545_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.63	chr6	-	6092	8	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	6241	junction_4	723.51043319276	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164
ES.28479.66	chr6	-	3005	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	2925.13518794749	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446840	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.67	chr6	-	1917	13	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2954.8298127341	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446854	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51439545_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.68	chr6	-	5661	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	885	junction_8	2755.04209359857	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.7	chr6	-	1871	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	-17	-192	-15	0	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	False	NA	NA	False	AATAAA	-16	NA	51446842	51437911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.70	chr6	-	4233	10	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	874	junction_9	2651.01279504762	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446828	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440235_51440390_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.71	chr6	-	2856	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	2833.8886163715	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441503_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.72	chr6	-	1408	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	47	192	0	0	multi-exon	FALSE	canonical	3	499	junction_1	2676.86493431088	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446827	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.77	chr6	-	4384	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	874	junction_8	2767.42458964558	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.78	chr6	-	1580	12	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3434.21421474073	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443294_51443385_51443474_51443686_51443885_51444033_51444167_51444274_51446650
ES.28479.79	chr6	-	2895	13	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	2749.30034534041	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.8	chr6	-	3090	10	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	615	junction_1	2652.833872589	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	False	NA	NA	False	AATAAA	-16	NA	51446826	51437911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.80	chr6	-	1562	12	NIC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2846.0788655782	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.81	chr6	-	5238	10	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	518	0	intron_retention	FALSE	canonical	0	0	junction_1	2749.07382832478	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446234	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.83	chr6	-	2741	11	NIC	ENSMUSG00000004980.17	novel	1542	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	615	junction_1	2556.45567338845	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51438414_51438899_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.84	chr6	-	1698	13	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	2535.94224626447	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51440196_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.85	chr6	-	1698	13	FSM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	2	3	0	0	multi-exon	FALSE	canonical	3	287	junction_2	3043.32879243911	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.89	chr6	-	1399	5	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	-302	0	intron_retention	FALSE	canonical	1	2	junction_2	3691.03427239575	3292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51441442	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51439036_51439318_51439545_51440390_51440474_51441068_51441192_51441407
ES.28479.9	chr6	-	3572	9	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGCACTGCTACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	51446823	51437912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.90	chr6	-	1804	13	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3146.91132854458	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51439545_51440196_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.91	chr6	-	1692	13	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3349.03844720143	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51440390_51440476_51441074_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444274_51444370_51444409_51446650
ES.28479.92	chr6	-	1544	12	NNC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3290.85241789474	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446854	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ES.28479.93	chr6	-	2954	11	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2180.54453061615	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.94	chr6	-	1924	14	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2880.66509825145	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438899_51439036_51439318_51439545_51440196_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.28479.96	chr6	-	6412	9	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	885	junction_8	2147.75760605684	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51440474_51441068_51441192_51441407_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370
ES.28479.97	chr6	-	3168	10	NNC	ENSMUSG00000004980.17	novel	1662	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	2282.95157122161	3294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446823	51438103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51438414_51438962_51440474_51441068_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ES.2848.1	chr10	+	182	1	Intergenic	novelGene_2177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAATTGCATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	59985210	59985392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_59985200_59985400
ES.28480.1	chr6	+	2400	7	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	-263	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1005.90639060832	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447076	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51447720_51448411_51448491_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.11	chr6	+	1737	6	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	956.616746665037	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATGACTTTTTTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	51447679	51460682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459439
ES.28480.12	chr6	+	2210	6	NNC	ENSMUSG00000029836.16	novel	1217	2	NA	NA	233	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	928.575338892865	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447958	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51448491_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.13	chr6	+	551	1	ISM	ENSMUSG00000029836.16	ENSMUST00000156463.2	1217	2	335	3693	252	-512	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACACTAAAATTGT	NA	False	NA	NA	False	NA	NA	NA	51447977	51448528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51448000_51448500
ES.28480.14	chr6	+	2400	5	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	399	1	348	-1	3prime_fragment	FALSE	canonical	3	882	junction_4	654.089968964515	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51448073	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.15	chr6	+	1763	5	NNC	ENSMUSG00000029836.16	novel	1080	6	NA	NA	-2503	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	870.240879009944	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51451934	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51452073_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.16	chr6	+	1680	3	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	7545	1	782	-1	3prime_fragment	FALSE	canonical	3	882	junction_2	323	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51455219	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51455581_51458703_51458799_51459459
ES.28480.2	chr6	+	2258	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	-362	-7	-192	7	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTTGTCATTGTCT	NA	False	NA	6	True	AATAAA	-26	NA	51447147	51460691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.3	chr6	+	1940	6	FSM	ENSMUSG00000029836.16	ENSMUST00000094623.10	1080	6	-190	-670	-190	-1	multi-exon	FALSE	canonical	0	0	junction_1	932.93077985454	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447149	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51447412_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ES.28480.5	chr6	+	1873	6	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	948.65175907706	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447489	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51447720_51448795_51448849_51452210_51452319_51455417_51455581_51458703_51458799_51459459
ES.28480.6	chr6	+	1699	6	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	955.429871837803	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	51447621	51460683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51447720_51448795_51448849_51452210_51452354_51455494_51455581_51458703_51458799_51459459
ES.28480.7	chr6	+	1751	6	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1115.1574956032	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGATGACTTTTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	51447646	51460680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51447720_51448795_51448849_51452210_51452319_51455417_51455581_51458665_51458799_51459459
ES.28481.1	chr6	-	2212	1	Antisense	novelGene_ENSMUSG00000029836.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGTGCATG	10006	False	NA	NA	False	NA	NA	NA	51456649	51454437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_51454400_51456600
ES.28482.1	chr6	+	178	1	Intergenic	novelGene_23711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATAGGATT	4035	False	NA	NA	False	NA	NA	NA	51469224	51469402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51469200_51469400
ES.28483.1	chr6	+	207	1	Intergenic	novelGene_23712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTACATGAGTACAGTG	3561	False	NA	NA	False	NA	NA	NA	51481037	51481244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51481000_51481200
ES.28484.1	chr6	-	2943	1	Intergenic	novelGene_23713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51484640	51481697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51481700_51484600
ES.28485.1	chr6	-	178	1	Intergenic	novelGene_23714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	51496496	51496318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51496300_51496500
ES.28486.1	chr6	-	301	1	Intergenic	novelGene_23715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	51497273	51496972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51497000_51497300
ES.28487.1	chr6	+	225	1	Intergenic	novelGene_23716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGTGCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	51498870	51499095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51498900_51499100
ES.28488.1	chr6	+	2676	9	NNC	ENSMUSG00000038301.16	novel	2464	7	NA	NA	-424	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.097626465854	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500456	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51500572_51521520_51521630_51538997_51539045_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.10	chr6	+	6482	3	NNC	ENSMUSG00000038301.16	novel	6512	2	NA	NA	30	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	151	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGTTAGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	51500910	51545488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51501015_51538997_51540572_51540684
ES.28488.11	chr6	+	1035	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	31	1414	31	193	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAGAGTTTGGCGTA	NA	False	NA	NA	False	NA	NA	NA	51500911	51566245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.12	chr6	+	1742	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	56	682	-25	-673	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTCCCAAAGATAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	51500936	51566977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.13	chr6	+	1524	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	56	900	-25	707	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGGTAGCTTCCATGA	NA	False	NA	NA	False	ATTAAA	-24	NA	51500936	51566759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.14	chr6	+	2190	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	121.19725867446	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500937	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860_51566590_51566813
ES.28488.15	chr6	+	2638	9	NNC	ENSMUSG00000038301.16	novel	2464	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	152.094080670485	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51500937	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51501015_51521520_51521630_51538997_51539045_51552882_51552970_51554814_51554930_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.16	chr6	+	787	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	63	1630	-18	6	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCAGTATCCCAGGTAG	NA	False	NA	NA	False	AATAGA	-16	NA	51500943	51566029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.17	chr6	+	2391	7	NNC	ENSMUSG00000038301.16	novel	809	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.631479105663	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51501233	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51501288_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.18	chr6	+	2444	7	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	-2152	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	129.562082930668	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51519350	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51519458_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.19	chr6	+	2476	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	-3	-9	-3	0	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51521499	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.2	chr6	+	2481	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	-1	0	-1	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500879	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.20	chr6	+	2137	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	19	308	18	-308	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGTGTAAATATTTTG	NA	False	NA	NA	False	TTTAAA	-21	NA	51521521	51567342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.21	chr6	+	2552	7	FSM	ENSMUSG00000038301.16	ENSMUST00000114439.8	968	7	23	-1607	-19	0	multi-exon	FALSE	canonical	3	10	junction_1	127.070081276261	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51521526	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51521733_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.22	chr6	+	2640	9	NNC	ENSMUSG00000038301.16	novel	2464	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	163.342766521814	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51521532	51567650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51521630_51538997_51539045_51544436_51544528_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.23	chr6	+	2416	7	NNC	ENSMUSG00000038301.16	novel	2464	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	152.759796921689	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51521544	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565394_51565860
ES.28488.24	chr6	+	2087	7	FSM	ENSMUSG00000038301.16	ENSMUST00000114439.8	968	7	77	-1196	35	-402	multi-exon	FALSE	canonical	3	10	junction_1	127.070081276261	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGAGCCTTCTTACAG	NA	False	NA	NA	False	AATAAA	-17	NA	51521580	51567248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51521733_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.25	chr6	+	2421	7	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	9131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.631479105663	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	5162	False	NA	NA	False	ATTAAA	-24	NA	51530676	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51530752_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.26	chr6	+	2302	5	ISM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	31377	-9	31334	0	3prime_fragment	FALSE	canonical	3	298	junction_3	46.045493807755	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	7361	False	NA	NA	False	ATTAAA	-24	NA	51552879	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.27	chr6	+	5125	2	ISM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	40502	69	40459	-69	3prime_fragment	FALSE	canonical	3	327	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGAAGTGATGTTTGC	4475	False	NA	NA	False	AATATA	-12	NA	51562004	51567581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_51565409_51565860
ES.28488.3	chr6	+	2588	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	142.424917563105	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500887	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_51501015_51538997_51539045_51546773_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.5	chr6	+	2572	8	NIC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	144.691790664551	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500897	51567659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_51501015_51521520_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.6	chr6	+	2171	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	29	280	29	-271	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAACCGTGTCCTCTAAT	NA	False	NA	NA	False	NA	NA	NA	51500909	51567379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.7	chr6	+	3719	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	29	-1268	29	1268	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGGAGTTTGATACA	NA	False	NA	NA	False	AATAAA	-36	NA	51500909	51568927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28488.9	chr6	+	2069	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	30	381	30	-372	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCAAACATTCAAT	NA	False	NA	NA	False	AAAAAG	-44	NA	51500910	51567278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ES.28489.1	chr6	-	2326	1	Intergenic	novelGene_23717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAGGAGCAGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	51507009	51504683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51504700_51507000
ES.2849.1	chr10	-	128	1	Intergenic	novelGene_2178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	59992633	59992505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59992500_59992600
ES.28490.1	chr6	-	177	1	Intergenic	novelGene_23718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	51526980	51526803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51526800_51527000
ES.28491.1	chr6	-	179	1	Antisense	novelGene_ENSMUSG00000038301.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATACTATTG	5342	False	NA	NA	False	NA	NA	NA	51539960	51539781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_51539800_51540000
ES.28492.1	chr6	-	1777	1	Intergenic	novelGene_23719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51569537	51567760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51567800_51569500
ES.28493.1	chr6	+	169	1	Intergenic	novelGene_23720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	3885	False	NA	NA	False	NA	NA	NA	51573855	51574024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51573900_51574000
ES.28494.1	chr6	+	179	1	Intergenic	novelGene_23721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTGAAACTTAA	664	False	NA	NA	False	NA	NA	NA	51591443	51591622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51591400_51591600
ES.28495.1	chr6	+	1949	2	Antisense	novelGene_ENSMUSG00000108145.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGCAAC	NA	False	NA	NA	False	NA	NA	NA	51652505	51689406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_51654375_51689326
ES.28496.1	chr6	+	1354	1	Intergenic	novelGene_23722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGAAAGAAAACTCCTGC	NA	False	NA	NA	False	NA	NA	NA	51826576	51827930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51826600_51827900
ES.28497.1	chr6	+	3556	1	Intergenic	novelGene_23723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAATTATACCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	51843595	51847151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51843600_51847200
ES.28498.1	chr6	+	3475	1	Antisense	novelGene_ENSMUSG00000059182.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAATGATTATAAATCC	NA	False	NA	NA	False	NA	NA	NA	51853917	51857392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_51853900_51857400
ES.28499.1	chr6	+	1331	1	Intergenic	novelGene_23724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGTCAAAAGGACGCATA	NA	False	NA	NA	False	NA	NA	NA	51860783	51862114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51860800_51862100
ES.285.1	chr1	-	3828	15	FSM	ENSMUSG00000026121.14	ENSMUST00000114991.8	3773	15	-52	-3	-52	0	multi-exon	FALSE	canonical	2	8	junction_10	2.77102353446726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGACTCAAACCCACT	NA	False	NA	NA	False	AATAAA	-35	NA	36597482	36587719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36597096
ES.285.2	chr1	-	3936	16	NIC	ENSMUSG00000026121.14	novel	3892	16	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	4.73568016938081	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATATTTTGACTCAAA	NA	False	NA	NA	False	AATAAA	-29	NA	36597313	36587725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36595883_36596167_36597096
ES.285.3	chr1	-	3629	15	NNC	ENSMUSG00000026121.14	novel	3773	15	NA	NA	826	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	3.99042220670383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCTGCCACACAGATAT	NA	False	NA	NA	False	AATAAA	-18	NA	36595781	36587736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36595577
ES.285.4	chr1	-	3963	16	NIC	ENSMUSG00000026121.14	novel	3773	15	NA	NA	-79	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	4.73568016938081	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCCTGCCACACAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	36597509	36587738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36595883_36596011_36597096
ES.285.5	chr1	-	3469	15	NNC	ENSMUSG00000026121.14	novel	3773	15	NA	NA	-52	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.16117768557146	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAATTTAACCCTGC	NA	False	NA	NA	False	AATAAA	-7	NA	36597482	36587747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593325_36593482_36595012_36595159_36597434
ES.2850.1	chr10	-	5365	1	Intergenic	novelGene_2179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTTGGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	60005024	59999659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_59999700_60005000
ES.2850.2	chr10	-	2323	2	Intergenic	novelGene_2180	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAACAGGGAATGGTCTT	NA	False	NA	NA	False	NA	NA	NA	60008283	59999669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60001875_60008165
ES.28500.1	chr6	+	1889	1	Antisense	novelGene_ENSMUSG00000059182.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAGAAGGCAAAACACTA	NA	False	NA	NA	False	NA	NA	NA	51886302	51888191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_51886300_51888200
ES.28501.1	chr6	+	2274	1	Antisense	novelGene_ENSMUSG00000059182.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGCAAAAACGGAAAC	NA	False	NA	NA	False	NA	NA	NA	51897877	51900151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_51897900_51900200
ES.28502.1	chr6	-	6511	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	64	-3193	30	3193	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAAGACTTATTTA	892	False	NA	NA	False	AATAAA	-19	NA	51989465	51831208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.10	chr6	-	4733	2	ISM	ENSMUSG00000059182.9	ENSMUST00000205174.2	661	3	9347	-1682	9347	0	3prime_fragment	FALSE	canonical	3	532	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	9116	False	NA	-5	True	AATAAA	-18	NA	51839562	51834401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51836551_51836978
ES.28502.13	chr6	-	8538	12	NIC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	7	-3	intron_retention	FALSE	canonical	3	457	junction_8	28.1386766562847	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	852	False	NA	-8	True	AATAAA	-15	NA	51989505	51834404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_51836551_51836978_51837080_51851454_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.14	chr6	-	3263	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	5994	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	193.384960779156	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	6856	False	NA	-8	True	AATAAA	-15	NA	51983501	51834404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51983467
ES.28502.17	chr6	-	2466	5	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	-8586	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.20787508286	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	6135	False	NA	-8	True	AATAAA	-15	NA	51858236	51834404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51858208
ES.28502.2	chr6	-	3512	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	-5	60	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTTGGAGAATAGTGT	823	False	NA	55	True	AATGAA	-15	NA	51989534	51834341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.20	chr6	-	3267	2	ISM	ENSMUSG00000059182.9	ENSMUST00000205174.2	661	3	10046	-915	10046	-767	3prime_fragment	FALSE	canonical	3	532	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTAGACAGGCAGAAA	9815	False	NA	NA	False	ACTAAA	-33	NA	51838863	51835168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51836551_51836978
ES.28502.21	chr6	-	1644	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	-5	1743	-5	1	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	823	False	NA	-6	True	AATAAA	-19	NA	51989534	51836144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.22	chr6	-	8144	2	ISM	ENSMUSG00000059182.9	ENSMUST00000205174.2	661	3	4193	61	4193	1	3prime_fragment	FALSE	canonical	3	532	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACTTAGCCTGGTAT	3962	False	NA	-6	True	AATAAA	-19	NA	51844716	51836144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51836551_51836978
ES.28502.23	chr6	-	3163	2	NNC	ENSMUSG00000059182.9	novel	1583	13	NA	NA	9238	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	9007	False	NA	-7	True	AATAAA	-18	NA	51839671	51836145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836616_51836978
ES.28502.24	chr6	-	1697	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	834	False	NA	-7	True	AATAAA	-18	NA	51989523	51836145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.27	chr6	-	5720	2	NNC	ENSMUSG00000059182.9	novel	661	3	NA	NA	6683	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGACTTAGCCTGGT	6452	False	NA	-8	True	AATAAA	-17	NA	51842226	51836146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836619_51836978
ES.28502.29	chr6	-	1463	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	-5	1924	-5	-180	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCGTTTGGTTTGTATGG	823	False	NA	NA	False	NA	NA	NA	51989534	51836325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.3	chr6	-	3416	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	-13	-21	-13	21	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCTGCTGTGTTACTA	815	False	NA	16	True	AATAAA	-39	NA	51989542	51834380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.30	chr6	-	4080	9	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	1	-2173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	171.991823933581	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAAACATGTT	846	False	NA	NA	False	NA	NA	NA	51989511	51853624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51856829_51884866_51885005_51886265_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.31	chr6	-	1487	1	Intergenic	novelGene_23725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7569	False	NA	NA	False	AAGAAA	-9	NA	51866134	51864647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51864600_51866100
ES.28502.32	chr6	-	3095	7	NNC	ENSMUSG00000059182.9	novel	5896	4	NA	NA	-13	-39767	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	192.819143816744	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAGAAAAAGATACGTG	815	False	NA	NA	False	AATAAA	-19	NA	51989542	51891218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51893684_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.33	chr6	-	4541	1	Intergenic	novelGene_23726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTAAGTATTTTAGAA	NA	False	NA	NA	False	AATAAA	-8	NA	51895770	51891229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_51891200_51895800
ES.28502.34	chr6	-	5147	6	ISM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	17	59311	0	-42261	5prime_fragment	FALSE	canonical	3	457	junction_2	31.5061898680243	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTACTTTGGGTGTGTTT	845	False	NA	NA	False	NA	NA	NA	51989512	51893712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.35	chr6	-	710	5	NNC	ENSMUSG00000059182.9	novel	5896	4	NA	NA	0	-5010	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	228.911964519114	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTTCTCATATTGAGA	845	False	NA	NA	False	ATTAAA	-15	NA	51989512	51972548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51972821_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28502.5	chr6	-	6121	1	Genic_Genomic	ENSMUSG00000059182.9	novel	NA	NA	NA	NA	8392	5	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGCTAATAATTCAACA	8161	False	NA	0	True	AATAAA	-23	NA	51840517	51834396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_51834400_51840500
ES.28502.6	chr6	-	3363	12	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	152.322515605312	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATGATGCTAATAATTC	837	False	NA	-4	True	AATAAA	-19	NA	51989520	51834400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973120_51980629_51980736_51989314
ES.28502.9	chr6	-	3335	12	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	199.68168884378	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	818	False	NA	-5	True	AATAAA	-18	NA	51989539	51834401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51898256_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ES.28503.1	chr6	+	3319	1	Intergenic	novelGene_23727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGGTGTCCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	51993660	51996979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_51993700_51997000
ES.28504.1	chr6	+	2161	4	NNC	ENSMUSG00000085412.8	novel	408	3	NA	NA	-93	1265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.2062089478529	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAATGAAATACA	685	False	NA	NA	False	NA	NA	NA	52079835	52091929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52083750_52083877_52088920_52090733_52091887
ES.28504.10	chr6	+	412	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	10	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	63.3368420080726	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAGGAAAGA	788	False	NA	NA	False	NA	NA	NA	52079938	52089479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52082951_52083012_52083750_52083877_52089331
ES.28504.11	chr6	+	2809	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	11	-2429	11	1273	multi-exon	FALSE	canonical	3	144	junction_2	38	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGAAATACAGTCTAAAA	789	False	NA	NA	False	AAAACA	-3	NA	52079939	52091937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52089331
ES.28504.12	chr6	+	479	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	14	-102	14	102	multi-exon	FALSE	canonical	3	144	junction_2	38	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAGAAAGAAAGA	792	False	NA	NA	False	NA	NA	NA	52079942	52089610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52089331
ES.28504.13	chr6	+	2773	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	17	1289	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	91.2335221042987	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGTACATTTCA	795	False	NA	NA	False	AATACA	-5	NA	52079945	52091953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52083750_52083877_52089331_52089532_52089577
ES.28504.14	chr6	+	1080	6	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	21	537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	61.4543733187476	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	799	False	NA	NA	False	AATAAA	-17	NA	52079949	52090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52082951_52083012_52083344_52083500_52083750_52083877_52089331_52089536_52089577
ES.28504.15	chr6	+	332	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	30	29	-15	-29	multi-exon	FALSE	canonical	3	144	junction_2	38	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAGGAAAGA	808	False	NA	NA	False	NA	NA	NA	52079958	52089479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52089331
ES.28504.17	chr6	+	2247	6	NNC	ENSMUSG00000085412.8	novel	511	3	NA	NA	-14	1308	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	64.7407136197926	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTTTTTTTTTAAGTT	809	False	NA	NA	False	AATAAA	-11	NA	52079959	52091972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52082951_52083012_52083750_52083877_52089331_52089548_52089603_52089742_52090322
ES.28504.18	chr6	+	1112	5	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	-12	535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.4811789867684	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATATTACACAACTAAG	811	False	NA	NA	False	AATAAA	-15	NA	52079961	52090043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52082951_52083012_52083344_52083500_52083750_52083877_52089327
ES.28504.19	chr6	+	6807	7	Fusion	ENSMUSG00000085412.8_ENSMUSG00000081979.2	novel	391	3	NA	NA	-12	67	multi-exon	TRUE	non_canonical	0	0	junction_2	62.4137182214153	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGGACCAGAGTGGCT	811	False	NA	NA	False	AATAAA	-41	NA	52079961	52095938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_52080017_52082951_52083012_52083344_52083500_52083750_52083877_52089331_52089510_52089565_52094994_52095133
ES.28504.2	chr6	+	879	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	-21	537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.7373830891417	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	757	False	NA	NA	False	AATAAA	-17	NA	52079907	52090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52083750_52083877_52089327_52089468_52089541
ES.28504.20	chr6	+	849	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	-10	537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	92.7373830891417	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	813	False	NA	NA	False	AATAAA	-17	NA	52079963	52090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52083750_52083877_52089327_52089533_52089580
ES.28504.21	chr6	+	838	4	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	-7	537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	92.7373830891417	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	816	False	NA	NA	False	AATAAA	-17	NA	52079966	52090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52083750_52083877_52089327_52089522_52089577
ES.28504.22	chr6	+	2855	3	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	1500	535	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	21.5	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATATTACACAACTAAG	2332	False	NA	NA	False	AATAAA	-15	NA	52081482	52090043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52083500_52083750_52083877_52089331
ES.28504.23	chr6	+	2097	1	Intergenic	novelGene_23728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTCTTTCCCCCATGT	NA	False	NA	NA	False	NA	NA	NA	52092078	52094175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52092100_52094200
ES.28504.24	chr6	+	2755	2	Genic_Genomic	ENSMUSG00000081979.2	novel	650	1	NA	NA	-1842	403	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGCCTGTCACTT	NA	False	NA	NA	False	NA	NA	NA	52093379	52096274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_52094994_52095133
ES.28504.3	chr6	+	930	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	-2	-537	-2	537	multi-exon	FALSE	canonical	3	144	junction_2	38	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTACACAACTAAGAT	776	False	NA	NA	False	AATAAA	-17	NA	52079926	52090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52089331
ES.28504.4	chr6	+	899	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-53	-438	1	98	multi-exon	FALSE	canonical	3	43	junction_2	88.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAAGAAGAAAGA	779	False	NA	NA	False	NA	NA	NA	52079929	52089606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52088920
ES.28504.6	chr6	+	6231	7	Fusion	ENSMUSG00000085412.8_ENSMUSG00000081979.2	novel	511	3	NA	NA	2	188	multi-exon	TRUE	non_canonical	0	0	junction_2	62.4564292571674	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGAATGTGTACTACTTG	780	False	NA	NA	False	AATAAA	-19	NA	52079930	52096059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_52080017_52082951_52083012_52083750_52083877_52089331_52089556_52089603_52089742_52090322_52094994_52095133
ES.28504.7	chr6	+	2458	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	-51	-1999	3	503	multi-exon	FALSE	canonical	3	43	junction_2	88.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATTTTAGTTTTTAA	781	False	NA	NA	False	AATATA	-18	NA	52079931	52091167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52080017_52083750_52083877_52088920
ES.28504.8	chr6	+	2402	6	NNC	ENSMUSG00000085412.8	novel	391	3	NA	NA	3	498	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.5394792059828	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTGAAATTTTAGTT	781	False	NA	NA	False	AATATA	-13	NA	52079931	52091162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52080017_52082951_52083012_52083344_52083500_52083750_52083877_52088920_52089066_52089331
ES.28505.1	chr6	+	184	1	Intergenic	novelGene_23729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAGAGCAGTCAGTGC	NA	False	NA	NA	False	NA	NA	NA	52116785	52116969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52116800_52117000
ES.28506.1	chr6	-	354	1	Intergenic	novelGene_23730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTAGTAGTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	52119802	52119448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52119400_52119800
ES.28507.1	chr6	+	170	1	Intergenic	novelGene_23731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAAAGTTTT	1868	False	NA	NA	False	NA	NA	NA	52120269	52120439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52120300_52120400
ES.28508.1	chr6	+	177	1	Intergenic	novelGene_23732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCCAATATGTTT	6995	False	NA	NA	False	NA	NA	NA	52125396	52125573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52125400_52125600
ES.28509.1	chr6	-	2075	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	-27	-5	-27	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAAGCATCTTGTGTA	NA	False	NA	-6	True	AATAAA	-19	NA	52135324	52132569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52134070_52134546_52134642_52134844
ES.2851.1	chr10	+	2551	3	Antisense	novelGene_ENSMUSG00000057337.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCATGGTGGCACATA	7347	False	NA	NA	False	NA	NA	NA	60010734	60028681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_60011355_60026561_60026693_60026881
ES.2851.2	chr10	+	2467	3	Antisense	novelGene_ENSMUSG00000057337.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	60022184	60028670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_60022732_60026561_60026693_60026881
ES.2851.3	chr10	+	736	3	Antisense	novelGene_ENSMUSG00000057337.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGATCATCCTCCTGCC	NA	False	NA	NA	False	NA	NA	NA	60022216	60027319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_60022384_60026561_60026693_60026881
ES.2851.4	chr10	+	2259	3	Antisense	novelGene_ENSMUSG00000057337.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCATGGTGGCACATA	NA	False	NA	NA	False	NA	NA	NA	60022319	60028681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_60022648_60026561_60026693_60026881
ES.28510.1	chr6	+	742	2	FSM	ENSMUSG00000087658.3_ENSMUSG00002075580.1	ENSMUST00000159006.2	253	2	-106	-383	-14	136	multi-exon	FALSE	canonical	3	38	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAATTGTGACCAGA	NA	False	NA	NA	False	AATAAA	-15	NA	52135397	52139383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52135667_52138910
ES.28510.2	chr6	+	849	3	Fusion	ENSMUSG00000087658.3_ENSMUSG00002075580.1	novel	713	3	NA	NA	-11	136	multi-exon	FALSE	canonical	3	6	junction_2	1.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAATTGTGACCAGA	NA	False	NA	NA	False	AATAAA	-15	NA	52135400	52139383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_52135667_52137680_52137791_52138910
ES.28510.3	chr6	+	3277	1	FSM	ENSMUSG00002075344.1	ENSMUST00020181756.1	214	1	-1915	-1148	-1915	1148	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAATTGTGACCAGA	NA	False	NA	NA	False	AATAAA	-15	NA	52136106	52139383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52136100_52139400
ES.28510.4	chr6	+	2953	1	FSM	ENSMUSG00002075344.1	ENSMUST00020181756.1	214	1	-1710	-1029	-1710	1029	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52136311	52139264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52136300_52139300
ES.28511.1	chr6	-	1304	2	FSM	ENSMUSG00000014704.11	ENSMUST00000014848.11	1775	2	375	96	375	-96	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGCTTTCTTATTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	52141436	52139492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52140606_52141245
ES.28512.1	chr6	-	2609	3	NNC	ENSMUSG00000079560.14	novel	2591	5	NA	NA	2920	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCCGTGTCAAAGGGGG	6910	False	NA	NA	False	AATAAA	-16	NA	52157915	52146042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52147723_52149100_52149750_52157635
ES.28513.1	chr6	-	1591	2	FSM	ENSMUSG00000000942.11	ENSMUST00000101395.3	1594	2	2	1	2	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTGTGTGTTCTAAG	7244	False	NA	NA	False	AATAAA	-35	NA	52168731	52166651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52167669_52168157
ES.28514.1	chr6	+	517	2	NNC	ENSMUSG00000085696.9	novel	575	2	NA	NA	-9116	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATGTTGATCTTTGAA	2467	False	NA	NA	False	AATAAA	-16	NA	52168987	52169996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52169013_52169504
ES.28514.2	chr6	+	1051	1	Genic_Genomic	ENSMUSG00000085696.9	novel	NA	NA	NA	NA	-9115	39	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGAATTGTGCTCTTTC	2468	False	NA	NA	False	AGTAAA	-19	NA	52168988	52170039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_52169000_52170000
ES.28515.1	chr6	-	1716	2	FSM	ENSMUSG00000038253.7	ENSMUST00000048794.7	1877	2	131	30	131	-30	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTCTGATTTATGCCA	9952	False	NA	NA	False	AATAAA	-18	NA	52181436	52178763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52179812_52180768
ES.28515.2	chr6	-	4275	4	Fusion	ENSMUSG00000043219.10_ENSMUSG00000038253.7	novel	1877	2	NA	NA	-2961	-507	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTACACACACAAAAAGCC	3042	False	NA	NA	False	NA	NA	NA	52188663	52179240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_52179812_52180768_52183605_52185165_52185425_52188054
ES.28516.1	chr6	-	2520	4	NNC	ENSMUSG00000038236.9	novel	2031	4	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.65685424949238	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACACGGACTGCTTT	9922	False	NA	NA	False	AATAAA	-14	NA	52198777	52191477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52193011_52194009_52194594_52194912_52195065_52198526
ES.28517.1	chr6	-	1929	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	-55	-1023	-55	2	multi-exon	FALSE	canonical	2	7	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTGTGCGGCTCTGCTCT	9678	False	NA	NA	False	AATAAA	-17	NA	52203224	52200077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52201463_52202507_52202598_52202770
ES.28517.2	chr6	-	1750	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	-40	-859	-40	-162	multi-exon	FALSE	canonical	2	7	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTCTTGGGCTACTG	9693	False	NA	NA	False	AATAAA	-13	NA	52203209	52200241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52201463_52202507_52202598_52202770
ES.28518.1	chr6	-	2571	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	-8	2	-8	0	multi-exon	FALSE	canonical	3	17	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTAATTTCACCTC	9655	False	NA	-15	True	AATAAA	-13	NA	52211927	52208178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52209761_52210938
ES.28518.2	chr6	-	1623	2	FSM	ENSMUSG00000000938.12	ENSMUST00000142611.2	1045	2	304	-882	304	-1	multi-exon	FALSE	canonical	3	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTTTTAATTTCACCT	5	True	NA	-16	True	AATAAA	-12	NA	52217471	52208179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52209761_52217429
ES.28518.3	chr6	-	1780	2	FSM	ENSMUSG00000000938.12	ENSMUST00000121043.2	1436	2	378	-722	319	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTTTTAATTTCACCT	8724	False	NA	-16	True	AATAAA	-12	NA	52217456	52208179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52209761_52217257
ES.28519.1	chr6	+	2505	2	FSM	ENSMUSG00002075397.1_ENSMUSG00000086427.9	ENSMUST00000137729.2	885	2	-1186	-434	-208	15	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGGAGATGTATGAGCAG	4375	False	NA	NA	False	AATAAA	-40	NA	52222014	52226794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52223789_52226063
ES.2852.1	chr10	-	6192	3	NIC	ENSMUSG00000057337.14	novel	6108	4	NA	NA	-232	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAGTGGTTATTTTTC	NA	False	NA	NA	False	CATAAA	-1	NA	60055314	60017348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60022706_60023894_60024141_60054725
ES.2852.2	chr10	-	6349	4	FSM	ENSMUSG00000057337.14	ENSMUST00000135158.9	6108	4	-236	-5	-236	5	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAGTGGTTATTTTTC	NA	False	NA	NA	False	CATAAA	-1	NA	60055318	60017348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60022706_60023894_60024141_60029914_60030068_60054725
ES.2852.3	chr10	-	4369	3	NIC	ENSMUSG00000057337.14	novel	6108	4	NA	NA	-230	-1814	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAATTGGGATGATTC	NA	False	NA	NA	False	NA	NA	NA	60055312	60019169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60022706_60023894_60024141_60054725
ES.28520.1	chr6	-	2932	2	FSM	ENSMUSG00000102373.2_ENSMUSG00000038203.22	ENSMUST00000147595.7	2400	2	220	-752	219	-724	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCAGTGTTTGTGTGCTT	8243	False	NA	NA	False	AATATA	-25	NA	52237568	52233921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52236129_52236843
ES.28521.1	chr6	-	131	1	Intergenic	novelGene_23733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	5062	False	NA	NA	False	NA	NA	NA	52255767	52255636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52255600_52255800
ES.28522.1	chr6	-	178	1	Intergenic	novelGene_23734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTATCAGAACAGT	2907	False	NA	NA	False	NA	NA	NA	52257922	52257744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52257700_52257900
ES.28523.1	chr6	-	177	1	Intergenic	novelGene_23735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTACTCATTT	NA	False	NA	NA	False	NA	NA	NA	52263686	52263509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52263500_52263700
ES.28524.1	chr6	-	152	1	Intergenic	novelGene_23736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	52271594	52271442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52271400_52271600
ES.28525.1	chr6	+	4985	1	Genic_Genomic	ENSMUSG00000005503.9	novel	NA	NA	NA	NA	-112	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAGCATTTAAGCATAAG	5339	False	NA	NA	False	AATAAA	-19	NA	52290370	52295355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_52290400_52295400
ES.28525.2	chr6	+	2929	3	FSM	ENSMUSG00000005503.9	ENSMUST00000031787.8	2877	3	-53	1	-53	-1	multi-exon	FALSE	canonical	1	2	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGCATAAGTTTTGTT	5398	False	NA	NA	False	AATAAA	-26	NA	52290429	52295362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52291257_52292722_52292980_52293517
ES.28525.3	chr6	+	4280	2	NIC	ENSMUSG00000005503.9	novel	2877	3	NA	NA	4	-5	intron_retention	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTTAAGCATAAGTTT	5509	False	NA	NA	False	AATAAA	-22	NA	52290540	52295358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52292980_52293517
ES.28526.1	chr6	-	204	1	Intergenic	novelGene_23737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATCCACTTATACTTCC	5503	False	NA	NA	False	AAAAAG	-4	NA	52308001	52307797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52307800_52308000
ES.28527.1	chr6	+	2278	1	Intergenic	novelGene_23738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	52310711	52312989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52310700_52313000
ES.28527.2	chr6	+	2277	2	Antisense	novelGene_ENSMUSG00000084282.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	52310713	52359761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_52312957_52359727
ES.28527.3	chr6	+	158	1	Intergenic	novelGene_23740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	52324031	52324189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52324000_52324200
ES.28527.4	chr6	+	182	1	Intergenic	novelGene_23741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	52348643	52348825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52348600_52348800
ES.28528.1	chr6	-	153	1	Intergenic	novelGene_23739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	52321077	52320924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52320900_52321100
ES.28529.1	chr6	-	353	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	-61	-79	-61	79	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAACATCAAGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	52323988	52323635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52323600_52324000
ES.2853.1	chr10	-	178	1	Intergenic	novelGene_2181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAGAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	60058422	60058244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60058200_60058400
ES.28530.1	chr6	+	2669	1	Intergenic	novelGene_23749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAATGAACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	52425416	52428085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52425400_52428100
ES.28530.2	chr6	+	2707	1	Intergenic	novelGene_23750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52427340	52430047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52427300_52430000
ES.28531.1	chr6	+	275	1	Intergenic	novelGene_23751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACACAGGGCAGG	NA	False	NA	NA	False	NA	NA	NA	52430574	52430849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52430600_52430800
ES.28532.1	chr6	+	1626	1	Intergenic	novelGene_23752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGGTTCTCGGTCCCT	NA	False	NA	NA	False	AATAAA	-9	NA	52432647	52434273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52432600_52434300
ES.28533.1	chr6	-	1750	4	Intergenic	novelGene_23744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTTTTATATGTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	52423129	52405897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52407226_52408679_52408795_52411545_52411647_52422923
ES.28533.2	chr6	-	1622	3	Intergenic	novelGene_23743	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	1.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTTTTATATGTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	52423116	52405897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52407226_52411545_52411647_52422923
ES.28533.3	chr6	-	1402	2	Intergenic	novelGene_23742	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTTTTATATGTATAT	NA	False	NA	NA	False	AATAAA	-18	NA	52409276	52405897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52407226_52409202
ES.28533.4	chr6	-	1674	2	Intergenic	novelGene_23745	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTTTTTATATGTATA	NA	False	NA	NA	False	AATAAA	-17	NA	52409267	52405898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52407226_52408920
ES.28533.5	chr6	-	1804	4	Intergenic	novelGene_23746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTTTTTTATATGTATA	NA	False	NA	NA	False	AATAAA	-17	NA	52460035	52405898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52407226_52411545_52411647_52439107_52439400_52459951
ES.28533.6	chr6	-	5274	2	Intergenic	novelGene_23747	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCCCAGAGGTTGGAAA	NA	False	NA	NA	False	AATAAA	-44	NA	52423116	52410865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52415947_52422923
ES.28533.7	chr6	-	176	1	Intergenic	novelGene_23748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	52422760	52422584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52422600_52422800
ES.28534.1	chr6	+	182	1	Intergenic	novelGene_23753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	52461004	52461186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52461000_52461200
ES.28535.1	chr6	-	2744	1	Intergenic	novelGene_23754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGCATTGGAATGTCAG	NA	False	NA	NA	False	AATAAA	-24	NA	52485194	52482450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52482400_52485200
ES.28536.1	chr6	-	1836	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	-4	-7	-4	7	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTTGTTTTGTCTCTT	2835	False	NA	6	True	AATAAA	-27	NA	52617378	52523205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ES.28536.10	chr6	-	1619	8	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	352.132222383605	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTTGGAGCTTTT	2907	False	NA	-7	True	AATAAA	-14	NA	52617306	52523218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52523916_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ES.28536.11	chr6	-	1646	7	NIC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-27	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	390.44821110559	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAACATTTTTTTGGAGC	2886	False	NA	-11	True	AATAAA	-10	NA	52617327	52523222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52599835_52599946_52607173_52607335_52617145
ES.28536.12	chr6	-	2787	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	89252	371	5380	97	3prime_fragment	FALSE	canonical	3	1080	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATGATGGTAAAAAGGAA	NA	False	NA	NA	False	AATAAA	-16	NA	52528122	52523583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_52524048_52525799
ES.28536.13	chr6	-	1341	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	113	371	39	97	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATGATGGTAAAAAGGAA	2952	False	NA	NA	False	AATAAA	-16	NA	52617261	52523583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ES.28536.14	chr6	-	1624	1	FSM	ENSMUSG00000064792.3	ENSMUST00000082858.3	122	1	-98	-1404	-98	1404	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTACAGATGCCTTT	3775	False	NA	NA	False	NA	NA	NA	52616438	52614814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52614800_52616400
ES.28536.2	chr6	-	3506	7	NIC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	833	junction_4	85.5759896232582	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2910	False	NA	-1	True	AATAAA	-20	NA	52617303	52523212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ES.28536.3	chr6	-	9160	8	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	449.60009441498	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGGAGCTTTTTGTTT	2910	False	NA	-2	True	AATAAA	-19	NA	52617303	52523213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52524048_52525799_52529134_52529182_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607325_52617145
ES.28536.4	chr6	-	4546	7	NIC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	28	-3	intron_retention	FALSE	canonical	3	971	junction_4	56.2010280649345	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGAGCTTTTTGT	2867	False	NA	-4	True	AATAAA	-17	NA	52617346	52523215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52599946_52607173_52607335_52617145
ES.28536.6	chr6	-	1736	8	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_7	344.659548078437	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTTGGAGCTTTT	2912	False	NA	-7	True	AATAAA	-14	NA	52617301	52523218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607325_52617145
ES.28536.7	chr6	-	1357	5	NIC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	440.492054411882	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTTGGAGCTTTT	2908	False	NA	-7	True	AATAAA	-14	NA	52617305	52523218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52617145
ES.28536.9	chr6	-	2039	9	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	488.809123661783	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTTGGAGCTTTT	2841	False	NA	-7	True	AATAAA	-14	NA	52617372	52523218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597055_52599835_52599946_52606101_52606353_52607173_52607335_52617145
ES.28537.1	chr6	+	184	1	Intergenic	novelGene_23755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	52634397	52634581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52634400_52634600
ES.28538.1	chr6	-	256	1	Intergenic	novelGene_23756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTTCCAACAA	NA	False	NA	NA	False	NA	NA	NA	52687926	52687670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52687700_52687900
ES.28539.1	chr6	+	3353	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	-19	-49	-19	49	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCTCACATTTTCCTG	NA	False	NA	NA	False	CATAAA	-21	NA	52690694	52743814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.11	chr6	+	3000	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-9	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	157.280544092946	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52690725	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719655_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.12	chr6	+	2952	16	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	166.816945582076	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690728	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52742005_52742089_52742857
ES.28539.13	chr6	+	3188	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	157.344331815052	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690733	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706377_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.15	chr6	+	4033	17	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	21	0	0	0	intron_retention	FALSE	canonical	3	527	junction_12	69.8332556433538	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690734	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005
ES.28539.16	chr6	+	3663	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	22	-400	1	400	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGCTGTCTGTAAACT	NA	False	NA	NA	False	AATAAA	-22	NA	52690735	52744165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.17	chr6	+	3251	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_9	149.68638495478	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGACCTTTGTAAATG	NA	False	NA	NA	False	AATAAA	-22	NA	52690736	52743760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719682_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.18	chr6	+	2763	16	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	-292	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	201.045998053513	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCTGTGAAATAATTCT	NA	False	NA	14	True	AATAAA	-16	NA	52690736	52743473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52690874_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.19	chr6	+	2946	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	-295	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_8	151.97377300594	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTTCTGTGAAATAAT	NA	False	NA	11	True	AATAAA	-13	NA	52690736	52743470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718956_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.2	chr6	+	3005	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	-10	290	-10	-290	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTGAAATAATTCTTT	NA	False	NA	16	True	AATAAA	-18	NA	52690703	52743475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.20	chr6	+	3161	17	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_11	160.687281213387	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690736	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.22	chr6	+	4639	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	30	-1384	-4	1384	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTTCTGTTGCTTTCA	NA	False	NA	NA	False	AGTAAA	-14	NA	52690743	52745149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.24	chr6	+	2827	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-4	-294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.279516243274	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52690743	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698416_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.27	chr6	+	2984	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	-296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	201.304207812567	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAGTTCTGTGAAATAA	NA	False	NA	10	True	AATAAA	-12	NA	52690749	52743469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690874_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734712_52735197_52735341_52742005_52742089_52742857
ES.28539.28	chr6	+	3237	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	157.48006959085	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACCTTTGTAAATGAT	NA	False	NA	NA	False	AATAAA	-24	NA	52690749	52743762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718944_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.29	chr6	+	3115	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.279516243274	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690749	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698416_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.3	chr6	+	3338	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-6	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	157.280544092946	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCAGACTGTGTACC	NA	False	NA	NA	False	ATTAAA	-27	NA	52690707	52743791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719655_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.31	chr6	+	3230	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	157.333753640476	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAATGACCTTTGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	52690752	52743758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730372_52734557_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.33	chr6	+	2911	17	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.29830004068	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATTAAATGACCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	52690754	52743754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698416_52698452_52704183_52704287_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.38	chr6	+	3258	18	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	151.620063311608	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690773	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52690874_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.39	chr6	+	2969	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	28	-294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	201.938100763062	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52690775	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690874_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728062_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.4	chr6	+	3759	17	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	1	294	1	-294	intron_retention	FALSE	canonical	3	527	junction_12	69.8332556433538	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52690714	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005
ES.28539.41	chr6	+	3747	18	NIC	ENSMUSG00000004535.13	novel	936	5	NA	NA	-178	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	156.279516243274	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52691025	52743765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_52691615_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.42	chr6	+	2594	15	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	15550	294	-11598	-294	3prime_fragment	FALSE	canonical	3	527	junction_9	64.3481046451919	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52706263	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.7	chr6	+	3798	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	11	-524	-10	524	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGAAAGGGTATTT	NA	False	NA	NA	False	TTTAAA	-22	NA	52690724	52744289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ES.28539.8	chr6	+	2918	18	NNC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	-9	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	157.452931397089	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTGTGAAATAATT	NA	False	NA	12	True	AATAAA	-14	NA	52690725	52743471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742918
ES.2854.1	chr10	+	255	1	Intergenic	novelGene_2182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATGGGACTATTAACC	NA	False	NA	NA	False	NA	NA	NA	60060873	60061128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60060900_60061100
ES.28540.1	chr6	+	189	1	Intergenic	novelGene_23757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTTAAAACAACAAAGAA	NA	False	NA	NA	False	AATAAA	-6	NA	52759252	52759441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_52759300_52759400
ES.28541.1	chr6	-	2256	16	Genic_Genomic	ENSMUSG00000108170.2	novel	612	1	NA	NA	-44384	-407	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTGCGTCACTTCCGCC	NA	False	NA	NA	False	NA	NA	NA	52735324	52690735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_52690840_52698281_52698450_52704181_52704285_52706263_52706452_52710173_52710332_52713831_52713980_52714062_52714156_52716526_52716715_52718935_52719159_52719674_52719824_52721206_52721338_52723652_52723754_52728067_52728196_52730289_52730360_52734536_52734712_52735195
ES.28541.2	chr6	-	7676	4	Antisense	novelGene_ENSMUSG00000004535.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACTAAAAGTATTTCCAA	NA	False	NA	NA	False	NA	NA	NA	52737081	52722650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_52728196_52730289_52730360_52734536_52734712_52735195
ES.28542.1	chr6	-	2893	5	FSM	ENSMUSG00000063568.12	ENSMUST00000074541.6	2203	5	42	-732	42	732	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTCTTTATTTTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	53045574	52745049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_52747366_52754519_52754690_52789087_52789285_52870983_52871057_53045437
ES.28542.2	chr6	-	155	1	Intergenic	novelGene_23758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2931	False	NA	NA	False	NA	NA	NA	52958800	52958645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_52958600_52958800
ES.28543.1	chr6	+	4811	6	ISM	ENSMUSG00000053007.10	ENSMUST00000205120.3	7482	7	31174	2520	31098	-2520	3prime_fragment	FALSE	canonical	0	0	junction_3	1.01980390271856	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTTGAACAGTATTCT	5140	False	NA	NA	False	AATAAA	-15	NA	53581458	53674832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_53581574_53587406_53587518_53657920_53658245_53662277_53662506_53669883_53669993_53670908
ES.28544.1	chr6	-	157	1	Intergenic	novelGene_23759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53660051	53659894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_53659900_53660100
ES.28545.1	chr6	+	178	1	Intergenic	novelGene_23760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGATTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	53730087	53730265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_53730100_53730300
ES.28546.1	chr6	-	1848	1	Intergenic	novelGene_23761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAAGACGGCAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	53778643	53776795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_53776800_53778600
ES.28547.1	chr6	+	1122	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-8666	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6.80073525436772	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCACTCTCTCTGTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	53821954	53836502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823
ES.28547.2	chr6	+	896	7	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.2428837085396	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTGTCCCTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	53821954	53844063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_53822096_53828082_53828119_53829265_53829318_53834180_53834359_53835502_53835591_53835823_53835934_53843772
ES.28547.3	chr6	+	865	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-1048	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	9.33742469849155	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATATTTTATTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	53821954	53844120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_53822096_53834180_53834359_53835502_53835591_53835823_53835934_53843772
ES.28547.4	chr6	+	4090	4	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	36274	138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.6714276000077	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGTATGTTATGTATTT	NA	False	NA	NA	False	TTTAAA	-32	NA	53832001	53845306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_53834359_53835502_53835591_53835823_53835935_53843772
ES.28548.1	chr6	-	1168	8	NNC	ENSMUSG00000052955.6	novel	1488	12	NA	NA	-8020	-68851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.33197251134017	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCTAAAGAGTTGAACAAG	NA	False	NA	NA	False	AATAAA	-13	NA	53963676	53919214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_53919580_53924703_53924771_53929514_53929595_53930488_53930548_53931494_53931610_53944740_53944860_53951606_53951793_53963499
ES.28549.1	chr6	+	3395	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	107	-1084	67	-5	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGGAGCGTGTCAAG	NA	False	NA	NA	False	ATTAAA	-12	NA	54016664	54278790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ES.28549.2	chr6	+	2350	7	FSM	ENSMUSG00000004633.18	ENSMUST00000114403.8	1274	7	-70	-1006	-70	1006	multi-exon	FALSE	canonical	0	0	junction_6	7.55902698029904	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATACGCGTTATGTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	54016953	54200541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54198905
ES.28549.3	chr6	+	2548	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	397	-527	-69	527	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGATAAGGTTGGTATCT	NA	False	NA	NA	False	ATTAAA	-6	NA	54016954	54278233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ES.28549.4	chr6	+	1782	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	406	230	-60	100	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTAGACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	54016963	54277476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ES.28549.5	chr6	+	224	1	Intergenic	novelGene_23762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGATTCTTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	54021755	54021979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54021800_54022000
ES.28549.6	chr6	+	2646	1	Intergenic	novelGene_23765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATAAAGAGATGGGTG	NA	False	NA	NA	False	TTTAAA	-3	NA	54218401	54221047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54218400_54221000
ES.2855.1	chr10	+	182	1	Intergenic	novelGene_2183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAATAATTTCA	9059	False	NA	NA	False	NA	NA	NA	60071556	60071738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60071600_60071700
ES.28550.1	chr6	-	137	1	Intergenic	novelGene_23763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	-1	True	NA	NA	NA	54116576	54116439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54116400_54116600
ES.28551.1	chr6	-	155	1	Intergenic	novelGene_23764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATATTAAA	3345	False	NA	NA	False	NA	NA	NA	54174364	54174209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54174200_54174400
ES.28552.1	chr6	-	168	1	Intergenic	novelGene_23766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAACAAACAAGAA	2211	False	NA	NA	False	NA	NA	NA	54239691	54239523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54239500_54239700
ES.28553.1	chr6	-	224	1	Intergenic	novelGene_23767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCGGAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	54394582	54394358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54394400_54394600
ES.28554.1	chr6	+	4669	1	Genic_Genomic	ENSMUSG00000086040.9	novel	NA	NA	NA	NA	-38	-51127	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACACAGATCATTACC	NA	False	NA	NA	False	NA	NA	NA	54406549	54411218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_54406500_54411200
ES.28555.1	chr6	-	2994	1	Intergenic	novelGene_23768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCCCCAAAAACAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	54440225	54437231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54437200_54440200
ES.28556.1	chr6	+	179	1	Intergenic	novelGene_23769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATTCATCACATG	1388	False	NA	NA	False	NA	NA	NA	54457592	54457771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54457600_54457800
ES.28557.1	chr6	-	177	1	Intergenic	novelGene_23770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGTATTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	54459897	54459720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54459700_54459900
ES.28558.1	chr6	+	2948	2	ISM	ENSMUSG00000086040.9	ENSMUST00000163746.8	4102	7	32656	13307	-2367	-1081	internal_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGAGGTTTGGTTTATT	2249	False	NA	NA	False	AATAAA	-9	NA	54462523	54467446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_54462918_54464892
ES.28559.1	chr6	-	4814	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	-4	0	-4	0	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGAGCCTCTTGTTTGT	NA	False	NA	0	True	AATAAA	-17	NA	54543478	54482874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ES.28559.2	chr6	-	2289	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	77	2444	77	774	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCCGTGTGTTTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	54543397	54485318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ES.28559.3	chr6	-	1527	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	68	3215	68	3	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTCTAAATGTTCC	NA	False	NA	0	True	AGTAAA	-21	NA	54543406	54486089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ES.2856.1	chr10	+	179	1	Intergenic	novelGene_2184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAGTAAAAGA	2934	False	NA	NA	False	NA	NA	NA	60081811	60081990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60081800_60082000
ES.28560.1	chr6	+	179	1	Intergenic	novelGene_23771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	54560891	54561070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54560900_54561100
ES.28561.1	chr6	-	6101	1	NIC	ENSMUSG00000038074.17	novel	2694	4	NA	NA	2148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTACATGTGCATA	5814	False	NA	0	True	AATAAA	-19	NA	54560689	54554588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_54554600_54560700
ES.28561.2	chr6	-	2926	6	NNC	ENSMUSG00000038074.17	novel	2754	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.2365041127896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	54570170	54554589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_54556672_54559819_54559955_54562787_54562916_54563980_54564071_54566257_54566410_54569831
ES.28561.3	chr6	-	2742	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	-49	1	-49	0	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	54570211	54554589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
ES.28561.4	chr6	-	2876	5	NNC	ENSMUSG00000038074.17	novel	2754	5	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.41740410091868	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTGTACATGTGCAT	NA	False	NA	-1	True	AATAAA	-18	NA	54570210	54554589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_54556672_54559819_54559955_54562787_54562916_54566257_54566410_54569831
ES.28561.5	chr6	-	2321	4	NIC	ENSMUSG00000038074.17	novel	754	2	NA	NA	-2	1467	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.9566858950296	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATGAATCTAA	NA	False	NA	NA	False	NA	NA	NA	54570149	54558231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_54559955_54562787_54562916_54566257_54566410_54569831
ES.28562.1	chr6	+	6711	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	27	1	27	-1	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGTTTTGCTTAA	NA	False	NA	31	True	AATAAA	-41	NA	54572122	54622823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.10	chr6	+	6496	13	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	66	-21	combination_of_known_splicesites	FALSE	canonical	1	19	junction_2	73.9239004352148	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGTTCTTCAAAGGGT	NA	False	NA	11	True	AATAAA	-21	NA	54572161	54622803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54572457_54590076_54590194_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.11	chr6	+	6362	12	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	74	-22	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	79.8533780341889	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTTCTTCAAAGGG	NA	False	NA	10	True	AATAAA	-20	NA	54572169	54622802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54572457_54590076_54590194_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.14	chr6	+	3402	14	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	87	1558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	89.4621668077676	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTTGCCAACATAAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	54572182	54619576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607490_54607560_54612694_54612757_54617768
ES.28562.15	chr6	+	1687	13	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.975622745734	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	54572183	54618018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607490_54607560_54612694_54612757_54617768
ES.28562.17	chr6	+	6551	14	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	128	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	89.4621668077676	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTCTTCAAAGGGTTT	NA	False	NA	13	True	AATAAA	-23	NA	54572223	54622805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606895_54607488_54607560_54612694_54612757_54617768
ES.28562.2	chr6	+	3970	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	39	2730	39	2076	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGAAAGTGCTCCCTG	NA	False	NA	NA	False	AAGAAA	-11	NA	54572134	54620094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.20	chr6	+	1779	14	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	172	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	90.2712546067907	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	54572267	54618018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601041_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.3	chr6	+	6538	13	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	60	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	77.1384037515253	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTTCAAAGGGTTTTGT	NA	False	NA	16	True	AATAAA	-26	NA	54572155	54622808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54572457_54590076_54590194_54592199_54592356_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.5	chr6	+	1895	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	63	4781	63	25	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTTGATACTCTCCA	NA	False	NA	NA	False	AATAAA	-40	NA	54572158	54618043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ES.28562.7	chr6	+	6594	15	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	65	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	87.0019938781607	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAACGTTCTTCAAAGG	NA	False	NA	9	True	AATAAA	-19	NA	54572160	54622801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768_54618100_54618156
ES.28562.8	chr6	+	5880	15	NNC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	65	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	87.0019938781607	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTAAACGTTCTTCA	NA	False	NA	5	True	AATAAA	-15	NA	54572160	54622797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768_54619303_54620069
ES.28562.9	chr6	+	6588	13	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	65	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	91.345345925352	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAAACGTTCTTCAAAG	NA	False	NA	8	True	AATAAA	-18	NA	54572160	54622800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54617768
ES.28563.1	chr6	-	5296	12	Antisense	novelGene_ENSMUSG00000005225.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATTGGTTTCAAGTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	54621209	54591547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_54592354_54593615_54593738_54596174_54596335_54597253_54597296_54599103_54599262_54601057_54601214_54601534_54601620_54605827_54605888_54606802_54606934_54607486_54607560_54612694_54612756_54617767
ES.28563.2	chr6	-	2444	1	Antisense	novelGene_ENSMUSG00000005225.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATTGGTTTCAAGTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	54593991	54591547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_54591500_54594000
ES.28563.3	chr6	-	5071	2	Antisense	novelGene_ENSMUSG00000005225.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATTGGTTTCAAGTCA	NA	False	NA	NA	False	AAGAAA	-6	NA	54597880	54591547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_54592354_54593615
ES.28563.4	chr6	-	178	1	Intergenic	novelGene_23772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATAAACTAT	NA	False	NA	NA	False	NA	NA	NA	54603231	54603053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54603100_54603200
ES.28563.5	chr6	-	175	1	Intergenic	novelGene_23773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	54605204	54605029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54605000_54605200
ES.28564.1	chr6	+	226	1	Intergenic	novelGene_23774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTTCTTTATGGGGC	NA	False	NA	NA	False	NA	NA	NA	54647456	54647682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54647500_54647700
ES.28565.1	chr6	+	5287	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	19	-3	19	3	multi-exon	TRUE	canonical	3	54	junction_2	0.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCGTCTTTACTCTTT	NA	False	NA	10	True	ATTAAA	-22	NA	54658627	54680839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54658917_54665990_54666114_54675964
ES.28565.2	chr6	+	2380	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	72	2851	-58	-141	multi-exon	FALSE	canonical	3	54	junction_2	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATACTCGGTGTTATCA	NA	False	NA	NA	False	AATATA	-39	NA	54658680	54677985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54658917_54665990_54666114_54675964
ES.28565.3	chr6	+	890	2	FSM	ENSMUSG00000038065.14	ENSMUST00000185518.2	645	2	-80	-165	-32	165	multi-exon	FALSE	canonical	3	55	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCCTAGTTTGATGGTG	NA	False	NA	NA	False	NA	NA	NA	54658706	54666670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54658917_54665990
ES.28565.4	chr6	+	561	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	148	4594	18	-1884	multi-exon	FALSE	canonical	3	54	junction_2	0.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAATATCTGTGACGAGG	NA	False	NA	NA	False	AATGAA	-24	NA	54658756	54676242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54658917_54665990_54666114_54675964
ES.28565.5	chr6	+	5189	1	NIC	ENSMUSG00000038065.14	novel	5303	3	NA	NA	16859	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTGTCGTCTTTAC	NA	False	NA	5	True	ATTAAA	-17	NA	54675645	54680834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54675600_54680800
ES.28566.1	chr6	-	3123	1	Intergenic	novelGene_23775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCATCAAACTAGGAGCG	NA	False	NA	NA	False	NA	NA	NA	54669814	54666691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54666700_54669800
ES.28567.1	chr6	+	220	1	Intergenic	novelGene_23776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTGGGATGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	54696196	54696416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54696200_54696400
ES.28568.1	chr6	-	513	3	Intergenic	novelGene_23777	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAAAGTTACAGAC	NA	False	NA	NA	False	NA	NA	NA	54732676	54722263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54722490_54731407_54731510_54732491
ES.28569.1	chr6	-	175	1	Intergenic	novelGene_23778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATTAATTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	54733962	54733787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54733800_54734000
ES.2857.1	chr10	-	175	1	Intergenic	novelGene_2185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGGACTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	60098038	60097863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60097900_60098000
ES.28570.1	chr6	+	5276	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-335	945	-335	-945	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTTAGTTTCAGT	NA	False	NA	7	True	AATAAA	-20	NA	54793565	54869540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.10	chr6	+	2347	4	NIC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-316	-3773	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	272.154776225262	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54793584	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54794458_54840884_54840981_54855333_54855440_54865440
ES.28570.11	chr6	+	6446	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-316	-3765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	309.338907995745	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATGGTTAAGAATACT	NA	False	NA	15	True	AATAAA	-17	NA	54793584	54866720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54849425_54853435_54855333_54855440_54861749_54861832_54865440
ES.28570.12	chr6	+	3669	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-312	-2527	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	276.43206669994	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCAGTTATCCAGC	NA	False	NA	NA	False	AATAAA	-12	NA	54793588	54867958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54855335_54855440_54861749_54861832_54865440
ES.28570.13	chr6	+	10819	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-312	4834	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	253.357139232349	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGTGTGGTACTTAA	NA	False	NA	NA	False	NA	NA	NA	54793588	54875319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440_54871599_54871811
ES.28570.14	chr6	+	3484	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-311	2713	-311	-2713	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATGTTCCAGTTTCTA	NA	False	NA	NA	False	AATAAA	-26	NA	54793589	54867772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.15	chr6	+	6264	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-311	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	306.423497793495	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAAGCTCTCCTGTTCT	NA	False	NA	9	True	AATAAA	-19	NA	54793589	54870478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54849425_54849500_54855333_54855440_54861749_54861832_54865440
ES.28570.16	chr6	+	6700	4	NIC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-311	585	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	272.154776225262	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTACTGACATGATTT	NA	False	NA	NA	False	TATAAA	-24	NA	54793589	54871070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54794458_54840884_54840981_54855333_54855440_54865440
ES.28570.17	chr6	+	6784	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-311	-587	-311	587	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTACTGACATGATTTTT	NA	False	NA	NA	False	TATAAA	-26	NA	54793589	54871072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.18	chr6	+	2146	3	NNC	ENSMUSG00000058446.15	novel	397	4	NA	NA	-309	-4797	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	275	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGAATGAAGCCACAG	NA	False	NA	NA	False	NA	NA	NA	54793591	54850609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54849425
ES.28570.19	chr6	+	2315	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-305	3876	-305	-3876	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTGTTGTTACTGTA	NA	False	NA	-96	True	TATAAA	-23	NA	54793595	54866609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.2	chr6	+	1421	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-328	4793	-328	3596	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCAAAGTTAACTCATTT	NA	False	NA	9	True	GATAAA	-15	NA	54793572	54865692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.20	chr6	+	3644	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-265	-2713	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	316.823231471431	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATGTTCCAGTTTCTA	NA	False	NA	NA	False	AATAAA	-26	NA	54793635	54867772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54797949_54798156_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.21	chr6	+	1763	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-264	4387	-264	4002	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAAAGAGTAAATCAAGG	NA	False	NA	NA	False	ATTAAA	-21	NA	54793636	54866098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.22	chr6	+	2277	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-260	-3775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	253.357139232349	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAATACATCTAATGGT	NA	False	NA	5	True	AATAAA	-7	NA	54793640	54866710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440_54865974_54866067
ES.28570.23	chr6	+	5061	3	NNC	ENSMUSG00000058446.15	novel	397	4	NA	NA	-246	-1819	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	275	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCTTCAGTTTTGAAG	NA	False	NA	NA	False	NA	NA	NA	54793654	54853587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54840884_54840981_54849425
ES.28570.24	chr6	+	5143	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-224	-945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	329.964013189317	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTTAGTTTCAGT	NA	False	NA	7	True	AATAAA	-20	NA	54793676	54869540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54849425_54849500_54855333_54855440_54861749_54861832_54865440
ES.28570.25	chr6	+	2259	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-221	-3773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.357139232349	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54793679	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794017_54794091_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.27	chr6	+	1960	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-25	-3773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	317.068194557575	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54794229	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794458_54797979_54798156_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.28	chr6	+	10303	4	FSM	ENSMUSG00000058446.15	ENSMUST00000127331.2	574	4	-20	-9709	-20	1320	multi-exon	FALSE	canonical	3	557	junction_1	54.2361093327642	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATGGTAAAGAGAAACCT	NA	False	NA	NA	False	AAAAAG	-4	NA	54794412	54871805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749
ES.28570.29	chr6	+	1750	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	143	-3773	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	280.994995507037	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54794575	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794770_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.3	chr6	+	2223	4	NIC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-326	-3907	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	272.154776225262	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAAGATTTTTGTTA	NA	False	NA	NA	False	GATAAA	-14	NA	54793574	54866578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_54794458_54840884_54840981_54855333_54855440_54865440
ES.28570.30	chr6	+	5496	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	160	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	280.994995507037	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTAAGCTCTCCTGT	NA	False	NA	6	True	AATAAA	-16	NA	54794592	54870475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794770_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.31	chr6	+	1845	1	Intergenic	novelGene_23779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	54800080	54801925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54800100_54801900
ES.28570.32	chr6	+	6186	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	5655	-945	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATATTTAGTTTCAGT	NA	False	NA	7	True	AATAAA	-20	NA	54800087	54869540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.33	chr6	+	4184	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	5655	-2521	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	280.564163784329	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTATCCAGCTGGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	54800087	54867964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801464_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.34	chr6	+	1562	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	5659	-3883	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	278.840904459873	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTATTAATGTGTTGT	NA	False	NA	NA	False	TATAAA	-16	NA	54800091	54866602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54800208_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.35	chr6	+	2928	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	5659	-3773	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	280.564163784329	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54800091	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801464_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.36	chr6	+	3579	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	5659	-3768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	281.425833924322	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCTAATGGTTAAGAAT	NA	False	NA	12	True	AATAAA	-14	NA	54800091	54866717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54802110_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.37	chr6	+	5854	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7342	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	322.108677312487	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTAAGCTCTCCTGTTC	NA	False	NA	8	True	AATAAA	-18	NA	54801774	54870477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801890_54840884_54840981_54849425_54849844_54855333_54855440_54861749_54861832_54865440
ES.28570.38	chr6	+	5351	4	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7346	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	281.458108191373	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTAAGCTCTCCTGTTCT	NA	False	NA	9	True	AATAAA	-19	NA	54801778	54870478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54865440
ES.28570.39	chr6	+	4563	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7346	-951	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	320.119102835179	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATGTTAATATTTAGT	NA	False	NA	1	True	AATAAA	-14	NA	54801778	54869534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801890_54840884_54840981_54849425_54849500_54855333_54855440_54861749_54861832_54865440
ES.28570.4	chr6	+	2526	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-326	3686	-326	-3686	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTAGAGTTCACCTTT	NA	False	NA	94	True	TTTAAA	-17	NA	54793574	54866799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.40	chr6	+	1665	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7348	-3773	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATCTAATGGTTA	NA	False	NA	7	True	AATAAA	-9	NA	54801780	54866712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.41	chr6	+	175	1	Intergenic	novelGene_23780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTGATACTTG	NA	False	NA	NA	False	NA	NA	NA	54809793	54809968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54809800_54810000
ES.28570.42	chr6	+	4284	3	ISM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	61432	950	60900	-950	3prime_fragment	FALSE	canonical	3	641	junction_2	24	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTTAATATTTAGTT	252	False	NA	2	True	AATAAA	-15	NA	54855332	54869535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_54855440_54861749_54861832_54865440
ES.28570.43	chr6	+	5677	1	Genic_Genomic	ENSMUSG00000058446.15	novel	NA	NA	NA	NA	75207	4831	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTTGTGTGGTACT	3179	False	NA	NA	False	NA	NA	NA	54869639	54875316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_54869600_54875300
ES.28570.5	chr6	+	6206	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-323	3	-323	-3	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTCCTGTTCTTTAG	NA	False	NA	13	True	AATAAA	-23	NA	54793577	54870482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.6	chr6	+	2358	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-317	-3774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	281.425833924322	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATACATCTAATGGTT	NA	False	NA	6	True	AATAAA	-8	NA	54793583	54866711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794363_54840860_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.8	chr6	+	5071	6	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-317	-950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.357139232349	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTTAATATTTAGTT	NA	False	NA	2	True	AATAAA	-15	NA	54793583	54869535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_54794083_54794264_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28570.9	chr6	+	2162	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-317	4041	-317	-4041	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTAATCTGAGGGACA	NA	False	NA	NA	False	AATAAA	-18	NA	54793583	54866444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ES.28571.1	chr6	-	3937	1	Antisense	novelGene_ENSMUSG00000058446.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACACCTGACCTCATG	NA	False	NA	NA	False	TTTAAA	-14	NA	54821906	54817969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_54818000_54821900
ES.28572.1	chr6	-	2533	1	Intergenic	novelGene_23781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTATCTATCTATCTAT	5999	False	NA	NA	False	NA	NA	NA	54861555	54859022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54859000_54861600
ES.28573.1	chr6	-	3782	1	Intergenic	novelGene_23782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCAGAGGAATGTGAATG	NA	False	NA	NA	False	NA	NA	NA	54877796	54874014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54874000_54877800
ES.28574.1	chr6	-	160	1	Antisense	novelGene_ENSMUSG00000107841.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	54881039	54880879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_54880900_54881000
ES.28575.1	chr6	+	173	1	Intergenic	novelGene_23783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9259	False	NA	NA	False	NA	NA	NA	54906310	54906483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54906300_54906500
ES.28576.1	chr6	+	2693	1	Antisense	novelGene_ENSMUSG00000038058.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAACCAAAAGAGAAGTC	NA	False	NA	NA	False	AATAAA	-28	NA	54920613	54923306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_54920600_54923300
ES.28577.1	chr6	+	3751	1	Antisense	novelGene_ENSMUSG00000038058.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGTCCTTGTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	54923618	54927369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_54923600_54927400
ES.28578.1	chr6	-	3840	8	NNC	ENSMUSG00000038058.15	novel	4064	12	NA	NA	-770	12	intron_retention	FALSE	canonical	0	0	junction_6	7.95394908975717	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAAGTCTGGGGTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	54921208	54900921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915118_54916373_54920115
ES.28578.2	chr6	-	4386	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	-62	-9	-62	9	multi-exon	FALSE	canonical	2	6	junction_10	5.88175495258975	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCCAAGTCTGGGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	54949659	54900924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
ES.28578.3	chr6	-	3536	6	ISM	ENSMUSG00000038058.15	ENSMUST00000168172.4	4064	12	32169	0	359	0	intron_retention	FALSE	canonical	3	14	junction_4	3.42928563989645	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTTCTAATGGCCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	54916477	54900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338
ES.28578.4	chr6	-	4307	12	NIC	ENSMUSG00000038058.15	novel	4064	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	7.53723539206332	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTTCTAATGGCCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	54941713	54900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54941377
ES.28579.1	chr6	-	902	4	FSM	ENSMUSG00000002797.10	ENSMUST00000204301.3	431	4	-5	-466	-3	182	multi-exon	FALSE	canonical	3	46	junction_2	52.7320269538984	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATGGTACACTGTCC	2784	False	NA	NA	False	AATATA	-29	NA	54969851	54962450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54962987_54963817_54963954_54966484_54966543_54969679
ES.28579.2	chr6	-	2861	3	ISM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	1168	3068	842	0	3prime_fragment	FALSE	canonical	3	101	junction_2	32	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	3868	False	NA	-2	True	ATTAAA	-32	NA	54968767	54962632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_54962987_54963817_54963954_54966396
ES.28579.3	chr6	-	1925	3	ISM	ENSMUSG00000002797.10	ENSMUST00000002874.8	686	4	1773	0	1690	0	3prime_fragment	FALSE	canonical	3	46	junction_2	59.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	4716	False	NA	-2	True	ATTAAA	-32	NA	54967919	54962632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_54962987_54963817_54963954_54966484
ES.28579.4	chr6	-	878	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	14	3068	14	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2714	False	NA	-2	True	ATTAAA	-32	NA	54969921	54962632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
ES.2858.1	chr10	+	2691	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	-40	-5	-40	2	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTTGTGTCTCTTT	6949	False	NA	NA	False	AATAAA	-18	NA	60113408	60138378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.11	chr10	+	3344	13	NIC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	32	1	intron_retention	FALSE	canonical	3	864	junction_5	82.3739778220174	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATCTGGCCTTGTGTCT	7022	False	NA	NA	False	AATAAA	-14	NA	60113481	60138374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_60113605_60127420_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.13	chr10	+	2201	14	NNC	ENSMUSG00000004207.15	novel	2646	14	NA	NA	59	-364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	277.668824918032	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTCTGCCTTGTTGGGGTT	7049	False	NA	NA	False	NA	NA	NA	60113508	60138009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136377_60136552_60136661_60137472
ES.2858.16	chr10	+	2793	13	NIC	ENSMUSG00000004207.15	novel	2646	14	NA	NA	86	0	intron_retention	FALSE	canonical	3	864	junction_5	84.5782018147834	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	7076	False	NA	NA	False	AATAAA	-13	NA	60113535	60138373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.18	chr10	+	1374	1	NIC	ENSMUSG00000004207.15	novel	2646	14	NA	NA	86	-23464	mono-exon	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCGTCTAGTCTTCACAA	7076	False	NA	NA	False	NA	NA	NA	60113535	60114909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_60113500_60114900
ES.2858.19	chr10	+	2503	13	NIC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	86	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	293.552794324216	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATCTGGCCTTGTGTCT	7076	False	NA	NA	False	AATAAA	-14	NA	60113535	60138374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.2	chr10	+	2633	14	FSM	ENSMUSG00000004207.15	ENSMUST00000004316.15	2654	14	18	3	18	0	multi-exon	FALSE	non_canonical	0	0	junction_7	282.946207278023	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	7008	False	NA	NA	False	AATAAA	-13	NA	60113467	60138373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134870_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.22	chr10	+	2533	14	NNC	ENSMUSG00000004207.15	novel	2646	14	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	282.197106825339	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	7081	False	NA	NA	False	AATAAA	-13	NA	60113540	60138373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130765_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.23	chr10	+	2621	13	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	7007	3	7007	0	3prime_fragment	FALSE	canonical	3	864	junction_5	84.3677466018067	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	1150	False	NA	NA	False	AATAAA	-13	NA	60127289	60138373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.24	chr10	+	2156	10	NNC	ENSMUSG00000004207.15	novel	2564	14	NA	NA	10029	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_4	288.698398734906	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	633	False	NA	NA	False	AATAAA	-16	NA	60130311	60138376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135245_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.25	chr10	+	3153	7	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	13200	0	13200	0	3prime_fragment	FALSE	canonical	3	932	junction_1	87.3606827405148	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	541	False	NA	NA	False	AATAAA	-16	NA	60133482	60138376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.26	chr10	+	1925	7	NNC	ENSMUSG00000004207.15	novel	2646	14	NA	NA	14422	0	intron_retention	FALSE	canonical	3	130	junction_1	350.058090417386	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	1072	False	NA	NA	False	AATAAA	-13	NA	60134704	60138373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_60135009_60135245_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.5	chr10	+	1837	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	20	789	19	-789	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCCTTTGCCCTTCCCC	7009	False	NA	NA	False	AATGAA	-31	NA	60113468	60137584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.2858.8	chr10	+	2606	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.238956209746	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTTGTGTCTCTTT	7018	False	NA	NA	False	AATAAA	-18	NA	60113477	60138378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130328_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ES.28580.1	chr6	+	155	1	Intergenic	novelGene_23784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	54996854	54997009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_54996900_54997000
ES.28581.1	chr6	-	3674	1	Intergenic	novelGene_23785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	55003069	54999395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_54999400_55003100
ES.28582.1	chr6	+	2714	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-275	59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTAGATGTGCTTGT	NA	False	NA	94	True	NA	NA	NA	55014716	55056544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.11	chr6	+	2427	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	990.165421785673	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCATCTGTTGTGTTT	NA	False	NA	31	True	ATTAAA	-25	NA	55014946	55056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015225_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.12	chr6	+	3601	16	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	4	intron_retention	FALSE	canonical	3	2594	junction_10	233.123677237832	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTCCATTTTT	NA	False	NA	39	True	ATTAAA	-33	NA	55014946	55056489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.13	chr6	+	2429	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	975.251025377569	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014946	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045152_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056197
ES.28582.14	chr6	+	2351	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1012.75087207511	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014946	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55054545_55054759_55056204
ES.28582.15	chr6	+	1881	13	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-45	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1145.44150573286	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55014946	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.18	chr6	+	8099	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-44	-8	intron_retention	TRUE	non_canonical	0	0	junction_8	1316.40465916323	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55014947	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55036241_55036381_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55047224_55047528_55050410_55052366_55054759_55056204
ES.28582.19	chr6	+	2400	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-44	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1002.515396936	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTGTGTTTCCATTTT	NA	False	NA	38	True	ATTAAA	-32	NA	55014947	55056488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032868_55037907_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.2	chr6	+	2468	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-83	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	747.261037786495	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTGTGTTTCCATTTT	NA	False	NA	38	True	ATTAAA	-32	NA	55014908	55056488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045163_55046332_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.20	chr6	+	2414	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	988.573907754878	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014947	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053947_55054034_55054567_55054759_55056204
ES.28582.22	chr6	+	3668	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-44	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	998.192974751751	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATAATCCATCTGTT	NA	False	NA	25	True	ATTAAA	-19	NA	55014947	55056475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55041178_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.23	chr6	+	3321	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-41	900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCATTGTCCAGGGATC	NA	False	NA	NA	False	ATTAAA	-24	NA	55014950	55057385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.28	chr6	+	5937	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1002.20724957154	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014974	55056478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55047224_55047528_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.29	chr6	+	2191	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-12	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	998.192974751751	1602	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGAGCATTGTGACTG	NA	False	NA	3	True	AATAAA	-18	NA	55014979	55056383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042531_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.30	chr6	+	2391	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	998.616824662994	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55014979	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025162_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.31	chr6	+	9353	15	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	1049.08466419687	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014983	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55047224_55047528_55054034_55054567_55054759_55056204
ES.28582.32	chr6	+	2422	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014983	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045197_55046332_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.33	chr6	+	4418	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	771.729301993617	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014983	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.34	chr6	+	2543	19	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-6	129908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1117.19789050249	1630	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGCACATGGGTAATG	NA	False	NA	NA	False	NA	NA	NA	55014985	55186393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045150_55046321_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204_55056477_55124430_55124571_55186367
ES.28582.35	chr6	+	3334	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1002.515396936	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014986	55056478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55033837_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.36	chr6	+	7886	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	1030.35067601063	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55014987	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55047224_55047528_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.39	chr6	+	5001	15	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	1	-13	intron_retention	FALSE	canonical	3	2594	junction_10	225.221081860215	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATTTATAATCCATCT	NA	False	NA	22	True	ATTAAA	-16	NA	55014992	55056472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55046472_55050323_55050410_55052366_55054034_55054567_55054759_55056204
ES.28582.40	chr6	+	5924	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	1002.20724957154	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCATCTGTTGTGTTT	NA	False	NA	31	True	ATTAAA	-25	NA	55014992	55056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55047348_55047650_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.41	chr6	+	1775	13	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	1	-6004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	804.201864514681	1569	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAATTTTACATAAAT	NA	False	NA	NA	False	AATAAA	-9	NA	55014992	55050481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323
ES.28582.43	chr6	+	4329	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	769.958480843105	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014992	55056478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.44	chr6	+	4914	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	2	-7	intron_retention	FALSE	non_canonical	0	0	junction_10	771.360155108422	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	NA	False	NA	28	True	ATTAAA	-22	NA	55014993	55056478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046326_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.45	chr6	+	2245	16	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	12	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1015.36368963156	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATTTATAATCCATCT	NA	False	NA	22	True	ATTAAA	-16	NA	55015003	55056472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55053939_55054034_55054567_55054759_55056204
ES.28582.46	chr6	+	2214	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	998.616824662994	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTGTGTTTCCATTTT	NA	False	NA	38	True	ATTAAA	-32	NA	55015005	55056488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025087_55027391_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.47	chr6	+	3732	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	15	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	975.251025377569	1603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55015006	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55055879_55055949
ES.28582.48	chr6	+	2322	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	990.165421785673	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCATCTGTTGTGTTT	NA	False	NA	31	True	ATTAAA	-25	NA	55015006	55056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015180_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.49	chr6	+	9554	14	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_8	1096.64779154395	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55015020	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038039_55040075_55040239_55042432_55042598_55045045_55047224_55047528_55052477_55053939_55054759_55056204
ES.28582.51	chr6	+	2314	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	49	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1002.48939364713	1603	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATAATCCATCTGTT	NA	False	NA	25	True	ATTAAA	-19	NA	55015040	55056475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029243_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.53	chr6	+	4323	15	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-1634	-9	intron_retention	FALSE	non_canonical	0	0	junction_9	785.617175817061	1602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATAATCCATCTGTTG	NA	False	NA	26	True	ATTAAA	-20	NA	55023413	55056476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.54	chr6	+	2198	14	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	814.659590577997	1602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55027052	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.55	chr6	+	1546	11	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	3032	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1214.28602890752	1602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55030111	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.56	chr6	+	1640	11	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	5653	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	922.331334174439	1601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATCTGTTGTGTTTCC	NA	False	NA	33	True	ATTAAA	-27	NA	55032732	55056483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.57	chr6	+	5571	8	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	5669	-9	intron_retention	FALSE	non_canonical	0	0	junction_5	1046.61504920601	1601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATAATCCATCTGTTG	NA	False	NA	26	True	ATTAAA	-20	NA	55032748	55056476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55054759_55056204
ES.28582.58	chr6	+	7913	5	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	16606	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	1627.65736566392	1601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATCCATCTGTTGTG	5646	False	NA	28	True	ATTAAA	-22	NA	55043685	55056478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55045153_55046324_55047224_55047528_55050410_55052366_55054759_55056204
ES.28582.59	chr6	+	8346	5	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	17599	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	1645.27003862588	1601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCATCTGTTGTGTTT	6639	False	NA	31	True	ATTAAA	-25	NA	55044678	55056481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55045153_55046324_55047224_55047528_55054034_55054567_55054759_55056204
ES.28582.6	chr6	+	2341	17	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	-62	-101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	747.261037786495	1602	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGCATTGTGACTGC	NA	False	NA	4	True	AATAAA	-19	NA	55014929	55056384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045153_55046324_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ES.28582.60	chr6	+	4326	5	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	18181	890	intron_retention	FALSE	canonical	3	2758	junction_1	274.70472784428	1600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTAAGTGAACTCATTG	7221	False	NA	NA	False	ATTAAA	-14	NA	55045260	55057375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55046472_55050323_55050410_55052366_55054034_55054567_55054759_55056204
ES.28582.61	chr6	+	7054	2	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	20893	-13	intron_retention	FALSE	canonical	3	3507	junction_1	0	1600	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATTTATAATCCATCT	9933	False	NA	22	True	ATTAAA	-16	NA	55047972	55056472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55054759_55056204
ES.28582.62	chr6	+	2853	2	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	26474	-8	intron_retention	FALSE	canonical	0	0	junction_1	0	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAATCCATCTGTTGT	NA	False	NA	27	True	ATTAAA	-21	NA	55053553	55056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55055879_55055949
ES.28582.63	chr6	+	1223	1	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	28170	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	1595	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACATTTATAATCCATCT	NA	False	NA	22	True	ATTAAA	-16	NA	55055249	55056472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55055200_55056500
ES.28582.64	chr6	+	218	1	Intergenic	novelGene_23788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGGCTCCTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	55177168	55177386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_55177200_55177400
ES.28582.65	chr6	+	4096	12	ISM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	-3	38741	-3	2856	5prime_fragment	TRUE	canonical	1	1	junction_8	5.20489280301805	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAATATTGGTACCATT	NA	False	NA	NA	False	AATAAA	-17	NA	55180364	55258466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069
ES.28582.66	chr6	+	3903	18	NNC	ENSMUSG00000038022.12	novel	4270	18	NA	NA	7	360	intron_retention	FALSE	non_canonical	0	0	junction_11	6.34422059421777	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTTGGACTGTGGTTG	NA	False	NA	NA	False	CATAAA	-25	NA	55180374	55295660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55256136_55257381_55257595_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ES.28582.67	chr6	+	2710	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	18	1542	18	365	multi-exon	FALSE	canonical	1	1	junction_8	4.83570915636814	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACTGTGGTTGGTTCA	NA	False	NA	NA	False	CATAAA	-30	NA	55180385	55295665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ES.28582.68	chr6	+	2475	15	NIC	ENSMUSG00000038022.12	novel	4270	18	NA	NA	60	370	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	5.84537144644707	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTTGGTTCATTGGT	NA	False	NA	NA	False	CATAAA	-35	NA	55180427	55295670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ES.28582.69	chr6	+	5030	16	NIC	ENSMUSG00000038022.12	novel	4270	18	NA	NA	60	362	intron_retention	FALSE	canonical	1	1	junction_8	4.82861838992848	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGACTGTGGTTGGT	NA	False	NA	NA	False	CATAAA	-27	NA	55180427	55295662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ES.28582.70	chr6	+	174	1	Intergenic	novelGene_23789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55186193	55186367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_55186200_55186400
ES.28583.1	chr6	-	6480	1	Antisense	novelGene_ENSMUSG00000029777.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAAACCGACAGTGCT	NA	False	NA	NA	False	AATGAA	-20	NA	55055601	55049121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_55049100_55055600
ES.28584.1	chr6	-	1948	1	Intergenic	novelGene_23786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	55058470	55056522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_55056500_55058500
ES.28585.1	chr6	-	1852	4	ISM	ENSMUSG00000003476.17	ENSMUST00000114374.9	1440	12	24331	-1164	6991	0	3prime_fragment	FALSE	canonical	1	1	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCCTTACGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	55070567	55067033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263
ES.28585.2	chr6	-	1790	3	NIC	ENSMUSG00000003476.17	novel	2695	13	NA	NA	7011	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGCCTTACGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	55070547	55067033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_55068404_55069936_55070073_55070263
ES.28586.1	chr6	-	198	1	Intergenic	novelGene_23787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGAAGTGTCTAGT	NA	False	NA	NA	False	NA	NA	NA	55137364	55137166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_55137200_55137400
ES.28587.1	chr6	+	6204	17	FSM	ENSMUSG00000029778.13	ENSMUST00000070736.12	3695	17	33	-2542	-17	-4	multi-exon	FALSE	canonical	0	0	junction_3	0.790569415042095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTGCCTGTAAATT	NA	False	NA	NA	False	AATAAA	-13	NA	55428995	55478432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_55429354_55437141_55437272_55438493_55438600_55449204_55449313_55451544_55451566_55452451_55452494_55455066_55455177_55455663_55455762_55456149_55456283_55456939_55457094_55457408_55457470_55458084_55458155_55461926_55462019_55468211_55468296_55471061_55471192_55472558_55472601_55473967
ES.28587.2	chr6	+	5740	15	ISM	ENSMUSG00000029778.13	ENSMUST00000070756.12	6107	16	8154	1	-54	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	0.823754471047914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGCCTGTAAATTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	55437166	55478435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_55437272_55438493_55438600_55449204_55449313_55451544_55451566_55452451_55452494_55455066_55455177_55455663_55455762_55456149_55456283_55456939_55457094_55457408_55457470_55458084_55458155_55461926_55462019_55471061_55471192_55472558_55472601_55473967
ES.28588.1	chr6	+	3415	14	NNC	ENSMUSG00000037973.7	novel	3431	14	NA	NA	-55550	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.605692913385524	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATGAAAAATAATTAT	NA	False	NA	NA	False	NA	NA	NA	55758329	55955715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_55758396_55849442_55849633_55851284_55851334_55851676_55851721_55861680_55861733_55863983_55864071_55866003_55866207_55874649_55875237_55878423_55878482_55944044_55944128_55944606_55945795_55952572_55952701_55953327_55953440_55955147
ES.28589.1	chr6	-	161	1	Intergenic	novelGene_23790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56025594	56025433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_56025400_56025600
ES.2859.1	chr10	-	3993	1	Intergenic	novelGene_2186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGCACTACCTTTTG	NA	False	NA	NA	False	NA	NA	NA	60119590	60115597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60115600_60119600
ES.28590.1	chr6	+	176	1	Intergenic	novelGene_23791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56654900	56655076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_56654900_56655100
ES.28591.1	chr6	-	558	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	-59	-5	-41	5	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATTTATTATGTCGAA	NA	False	NA	NA	False	AATAAA	-21	NA	56681736	56678042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
ES.28591.2	chr6	-	465	4	NNC	ENSMUSG00000091625.9	novel	757	4	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	750.781370750944	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681670	56678049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56678275_56679080_56679154_56680290_56680395_56681607
ES.28591.4	chr6	-	1600	3	NIC	ENSMUSG00000091625.9	novel	757	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1537	junction_1	53	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681668	56678049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56678275_56679080_56680395_56681607
ES.28591.6	chr6	-	449	4	FSM	ENSMUSG00000091625.9	ENSMUST00000176595.3	274	4	6	-181	0	0	multi-exon	FALSE	canonical	3	19	junction_2	741.839755083416	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681662	56678049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56678275_56679080_56679154_56680298_56680395_56681607
ES.28591.7	chr6	-	765	4	FSM	ENSMUSG00000091625.9	ENSMUST00000175865.6	757	4	-8	0	-2	0	multi-exon	FALSE	canonical	3	1056	junction_2	255.422525762053	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681670	56678049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56678275_56679080_56679154_56679990_56680395_56681607
ES.28591.8	chr6	-	426	4	FSM	ENSMUSG00000091625.9	ENSMUST00000203958.2	416	4	-12	2	-12	0	multi-exon	FALSE	canonical	0	0	junction_3	641.947211398431	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	56681707	56678049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56681607
ES.28592.1	chr6	+	6791	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-98	-23	-70	23	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGCGTGTTGTCTGTG	NA	False	NA	66	True	AATAAA	-44	NA	56691813	56738920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.10	chr6	+	6181	9	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	46.0163014593742	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691907	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56732588_56732683_56734256
ES.28592.11	chr6	+	6086	8	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	35.8466119994168	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691909	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.12	chr6	+	7553	15	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	71	junction_4	11.656871495441	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691909	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.13	chr6	+	7419	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	26.6553309239759	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATCTCCTAGACTT	NA	False	NA	48	True	AATAAA	-26	NA	56691914	56738902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56708413_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.14	chr6	+	6592	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.031156212316	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGGCTATTGATCTC	NA	False	NA	40	True	AATAAA	-18	NA	56691914	56738894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713648_56713719_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.15	chr6	+	6845	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	24.9411752373905	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691914	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.16	chr6	+	3096	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.031156212316	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGTACTAAATTGAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	56691914	56739674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256_56734582_56738929
ES.28592.17	chr6	+	6620	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.8091195097655	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691914	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723337_56730349_56730404_56730822_56730912_56734256
ES.28592.18	chr6	+	6937	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	36.4192171112999	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691915	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56732588_56732683_56734256
ES.28592.19	chr6	+	6875	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	33.2454842380469	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691915	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707697_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.2	chr6	+	6776	16	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	26.2039861259483	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691836	56738897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707697_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.21	chr6	+	6656	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	26.3266658225711	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691917	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703301_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.24	chr6	+	2575	16	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	7	3756	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	26.2039861259483	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGAAGTTAGCCCTAAA	NA	False	NA	NA	False	ACTAAA	-26	NA	56691933	56734793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707697_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.25	chr6	+	6694	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.2732531472352	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGGGCTATTGATCTCC	NA	False	NA	41	True	AATAAA	-19	NA	56691952	56738895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56699231_56699299_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.26	chr6	+	3670	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	43	2957	28	-2957	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAAGAGGCATTGATT	NA	False	NA	NA	False	ATTAAA	-11	NA	56691954	56735940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.27	chr6	+	6176	13	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	11322	1	11307	-1	3prime_fragment	FALSE	canonical	3	71	junction_1	11.2274465287329	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56703233	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.28	chr6	+	5917	9	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	15174	529	-10812	-529	3prime_fragment	FALSE	canonical	3	86	junction_4	9.87420882906575	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTAAATCATGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	56707085	56738368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.29	chr6	+	5948	8	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	20353	1	-5633	-1	3prime_fragment	FALSE	canonical	3	86	junction_3	10.2738026264944	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56712264	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.3	chr6	+	6220	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-62	512	-34	-512	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGGAACGCAATTTAAG	NA	False	NA	NA	False	ATTAAA	-30	NA	56691849	56738385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.30	chr6	+	6580	7	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	20726	1	-5260	-1	3prime_fragment	FALSE	canonical	3	86	junction_2	11.066716867356	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56712637	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.31	chr6	+	6624	7	ISM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	21580	-897	-4406	897	3prime_fragment	FALSE	canonical	3	86	junction_2	11.066716867356	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAATGGTGAATTGTT	NA	False	NA	NA	False	NA	NA	NA	56713491	56739794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.32	chr6	+	176	1	Intergenic	novelGene_23793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGGAAGCACTCAG	5544	False	NA	NA	False	NA	NA	NA	56720554	56720730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_56720600_56720700
ES.28592.33	chr6	+	10269	2	ISM	ENSMUSG00000029787.11	ENSMUST00000176560.2	1198	5	10310	-7858	10310	-2	3prime_fragment	FALSE	canonical	3	86	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGGGCTATTGATCTCC	NA	False	NA	41	True	AATAAA	-19	NA	56728207	56738895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56730404_56730822
ES.28592.34	chr6	+	4663	1	Genic_Genomic	ENSMUSG00000029787.11	novel	NA	NA	NA	NA	17709	1372	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCTTTCATTCAAGA	NA	False	NA	NA	False	NA	NA	NA	56735606	56740269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_56735600_56740300
ES.28592.5	chr6	+	2459	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-29	4240	-1	3620	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGAGACTGTACATT	NA	False	NA	NA	False	AATGAA	-17	NA	56691882	56734657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.6	chr6	+	3465	15	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	5	3751	intron_retention	FALSE	canonical	3	71	junction_4	11.656871495441	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATCTCTGAAGTTAGCC	NA	False	NA	NA	False	ACTAAA	-21	NA	56691888	56734788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.7	chr6	+	3757	16	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-7	-2951	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	26.2039861259483	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCATTGATTATCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	56691904	56735946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707697_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.8	chr6	+	7447	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	-7	-770	-7	770	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATGTACTAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	56691904	56739667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ES.28592.9	chr6	+	6769	17	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	31.7086344707558	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	False	NA	42	True	AATAAA	-20	NA	56691905	56738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56732588_56732683_56734256
ES.28593.1	chr6	-	763	1	Intergenic	novelGene_23792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGAATCTTAAT	5676	False	NA	NA	False	NA	NA	NA	56699016	56698253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_56698300_56699000
ES.28594.1	chr6	+	133	1	Antisense	novelGene_ENSMUSG00000059486.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	8822	False	NA	NA	False	NA	NA	NA	56755375	56755508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_56755400_56755500
ES.28595.1	chr6	-	4116	5	NNC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	1	4676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.7319110790414	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGGTTGCCTTGGTCTTG	9704	False	NA	NA	False	NA	NA	NA	56774720	56749832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56750011_56754385_56757399_56758785_56758952_56766203_56766686_56774443
ES.28595.10	chr6	-	3314	3	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	92.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9721	False	NA	-2	True	AATAAA	-15	NA	56774703	56754510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56757399_56758785_56758952_56774443
ES.28595.11	chr6	-	3787	4	NNC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.3867020612044	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9722	False	NA	-2	True	AATAAA	-15	NA	56774702	56754510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56757399_56758785_56758952_56766203_56766678_56774443
ES.28595.12	chr6	-	4040	4	NNC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	-82	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.3867020612044	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	NA	False	NA	-2	True	AATAAA	-15	NA	56774346	56754510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56757399_56758785_56758952_56766203_56766686_56773842
ES.28595.13	chr6	-	3678	4	NNC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.3867020612044	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9737	False	NA	-2	True	AATAAA	-15	NA	56774687	56754510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774545
ES.28595.14	chr6	-	3735	5	NNC	ENSMUSG00000059486.12	novel	3868	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.7227567630211	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTGGTTTTTTGGTT	9705	False	NA	-2	True	AATAAA	-15	NA	56774719	56754510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467_56774508_56774560
ES.28595.15	chr6	-	1972	2	ISM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	19	10464	19	1390	5prime_fragment	FALSE	canonical	3	176	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTGATTTACAAAAAAGTG	9722	False	NA	NA	False	AAGAAA	-15	NA	56774702	56764972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_56766686_56774443
ES.28595.16	chr6	-	9680	1	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	41	1362	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAGAAAAGAAAA	9744	False	NA	NA	False	NA	NA	NA	56774680	56765000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56765000_56774700
ES.28595.17	chr6	-	3231	1	Genic_Genomic	ENSMUSG00000059486.12	novel	NA	NA	NA	NA	-37	-4563	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGCTTTGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	56774301	56771070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_56771100_56774300
ES.28595.2	chr6	-	1617	1	Intergenic	novelGene_23794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	56751860	56750243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_56750200_56751900
ES.28595.3	chr6	-	3841	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	-24	-1	-24	1	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGGTTTTTTGGTTTTT	9679	False	NA	1	True	AATAAA	-18	NA	56774745	56754507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
ES.28595.4	chr6	-	4197	4	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	85.3867020612044	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	56774318	56754508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56757399_56758785_56758952_56766203_56766686_56773659
ES.28595.5	chr6	-	3827	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114321.2	3868	4	42	-1	-35	0	multi-exon	FALSE	canonical	3	30	junction_3	71.2569684701472	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9668	False	NA	0	True	AATAAA	-17	NA	56774756	56754508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467
ES.28595.6	chr6	-	3908	4	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	204	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	83.0314532103481	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9907	False	NA	0	True	AATAAA	-17	NA	56774517	56754508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56757399_56758785_56758952_56766203_56766686_56774147
ES.28595.7	chr6	-	4472	5	NNC	ENSMUSG00000059486.12	novel	3868	4	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.5441881072441	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGTTTTTTGGTTT	9968	False	NA	-1	True	AATAAA	-16	NA	56774456	56754509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56757399_56758785_56758952_56766203_56766686_56773429_56773568_56773659
ES.28595.8	chr6	-	2031	5	NNC	ENSMUSG00000059486.12	novel	3868	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.7227567630211	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGTTTTTTGGTTT	9699	False	NA	-1	True	AATAAA	-16	NA	56774725	56754509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_56755392_56757155_56757399_56758785_56758952_56766203_56766686_56774467
ES.28595.9	chr6	-	4110	2	ISM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	14715	1	13726	0	3prime_fragment	FALSE	canonical	3	185	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGTTTTTTGGTTT	NA	False	NA	-1	True	AATAAA	-16	NA	56760006	56754509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_56757399_56758785
ES.28596.1	chr6	+	595	1	Intergenic	novelGene_23795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCAGTCAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	56803974	56804569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_56804000_56804600
ES.28597.1	chr6	+	3176	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	-165	-2	-165	2	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTTATGGTATTTT	NA	False	NA	38	True	CATAAA	-16	NA	56808878	56856345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.10	chr6	+	2016	7	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	43	9767	43	-9767	5prime_fragment	FALSE	canonical	3	670	junction_6	56.4842652623031	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATGTAAAAACAA	NA	False	NA	NA	False	AATAAA	-33	NA	56809086	56846576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704
ES.28597.11	chr6	+	2805	11	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.778746960445	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809089	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018_56855526_56855682
ES.28597.12	chr6	+	6439	14	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	379.337978292641	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTGGCTTTATGGTA	NA	False	NA	34	True	CATAAA	-12	NA	56809091	56856341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56811449_56811534_56811819_56814884_56819787_56819906_56820692_56820968_56826613_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845822_56850351_56850498_56852653_56852818_56855018
ES.28597.13	chr6	+	2927	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.739900637711	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809116	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809405_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.15	chr6	+	2257	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	74	-842	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	248.829457189924	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGTAGCTGTCATGG	NA	False	NA	4	True	AATAAA	-16	NA	56809117	56855501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845822_56850117_56850498_56852653_56852818_56855018
ES.28597.16	chr6	+	4449	12	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	74	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	341.43176901478	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATCTGGCTTTATGGT	NA	False	NA	33	True	CATAAA	-11	NA	56809117	56856340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56820692_56820968_56821364_56822607_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.17	chr6	+	7166	9	NIC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	75	-1	intron_retention	FALSE	canonical	3	670	junction_5	56.951185237886	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809118	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.18	chr6	+	2925	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	77	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	251.632889565556	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809120	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833402_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.19	chr6	+	2004	11	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	79	8751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	317.879993079149	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTTGTGGCAGACT	NA	False	NA	NA	False	AATAAA	-12	NA	56809122	56865094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845702_56845892_56850351_56850498_56852653_56852818_56855018_56855192_56864870
ES.28597.2	chr6	+	2929	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_7	242.411852376982	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809053	56856343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845822_56850351_56850498_56852653_56852818_56855018
ES.28597.20	chr6	+	2918	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	81	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.739900637711	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809124	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826631_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.21	chr6	+	2851	11	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	83	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.778746960445	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809126	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018_56855405_56855478
ES.28597.22	chr6	+	1862	9	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	85	-846	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	257.348954485928	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAAGATGTAGCTGTC	NA	False	NA	0	True	AATAAA	-12	NA	56809128	56855497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845822_56852653_56852818_56855018
ES.28597.25	chr6	+	7356	9	NIC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	112	-1	intron_retention	FALSE	canonical	3	670	junction_6	60.7638873015873	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809155	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56850498_56852653_56852818_56855018
ES.28597.26	chr6	+	5310	11	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	124	2589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	238.778746960445	687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTCCTTAGTATTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	56809167	56858932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018_56857626_56857789
ES.28597.27	chr6	+	1766	5	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	317	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	363.714431250672	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTGGCTTTATGGTA	NA	False	NA	34	True	CATAAA	-12	NA	56809360	56856341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826704_56850351_56850498_56852653_56852818_56855018
ES.28597.28	chr6	+	2188	10	NNC	ENSMUSG00000029781.8	novel	549	2	NA	NA	5450	-842	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	240.823586884674	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGTAGCTGTCATGG	NA	False	NA	4	True	AATAAA	-16	NA	56814493	56855501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56814884_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.29	chr6	+	2995	10	NNC	ENSMUSG00000029781.8	novel	549	2	NA	NA	5484	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	240.823586884674	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56814527	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56814884_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.3	chr6	+	2935	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	249.135294692921	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTGGCTTTATGGTA	NA	False	NA	34	True	CATAAA	-12	NA	56809059	56856341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845852_56850367_56850498_56852653_56852818_56855018
ES.28597.30	chr6	+	2844	10	NNC	ENSMUSG00000029781.8	novel	549	2	NA	NA	5484	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	244.203062639413	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56814527	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56814733_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.31	chr6	+	1930	7	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	6992	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	293.293226424796	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	410	False	NA	35	True	CATAAA	-13	NA	56833309	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018_56856153_56856287
ES.28597.32	chr6	+	5519	2	NIC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	22306	0	intron_retention	FALSE	canonical	3	825	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56848623	56856343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56852818_56855018
ES.28597.33	chr6	+	1447	4	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	24102	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	392.976957198369	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56850419	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56850498_56852653_56852818_56855018_56855405_56855523
ES.28597.4	chr6	+	2142	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	27	840	27	-840	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTAGCTGTCATGGAG	NA	False	NA	6	True	AATAAA	-18	NA	56809070	56855503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.5	chr6	+	6165	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	28	-3184	28	3184	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAAGATGATGTCTCC	NA	False	NA	NA	False	AATAAA	-13	NA	56809071	56859527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28597.6	chr6	+	2139	10	NNC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	34	-842	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	248.523640726592	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGTAGCTGTCATGG	NA	False	NA	4	True	AATAAA	-16	NA	56809077	56855501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845898_56850351_56850498_56852653_56852818_56855018
ES.28597.7	chr6	+	2659	8	NIC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	266.861119578812	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809082	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56855018
ES.28597.8	chr6	+	5167	9	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	41	2	41	-2	intron_retention	FALSE	canonical	3	670	junction_6	58.4674054495323	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTGGCTTTATGGTA	NA	False	NA	34	True	CATAAA	-12	NA	56809084	56856341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653
ES.28597.9	chr6	+	3575	9	NIC	ENSMUSG00000029781.8	novel	3009	10	NA	NA	42	-1	intron_retention	FALSE	canonical	3	670	junction_5	61.4161013090216	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGGCTTTATGGTAT	NA	False	NA	35	True	CATAAA	-13	NA	56809085	56856342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_56809413_56826622_56826769_56827547_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ES.28598.1	chr6	-	4492	1	Intergenic	novelGene_23796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCTTCTTGTAACTC	NA	False	NA	NA	False	NA	NA	NA	56814343	56809851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_56809900_56814300
ES.28599.1	chr6	-	1685	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	-13	4	-13	-4	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTTGTCCAGATC	1191	False	NA	-4	True	AATAAA	-22	NA	56900930	56859388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ES.28599.10	chr6	-	1858	1	NIC	ENSMUSG00000029780.15	novel	1676	9	NA	NA	-21	-26260	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTTACACACATGGTCT	1225	False	NA	NA	False	NA	NA	NA	56900896	56899038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56899000_56900900
ES.28599.2	chr6	-	1466	9	NIC	ENSMUSG00000029780.15	novel	1519	10	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	76.1641935229409	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTTGTCCAGATC	9828	False	NA	-4	True	AATAAA	-22	NA	56878877	56859388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56878822
ES.28599.4	chr6	-	1723	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-126	-530	-13	-21	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAGCTTTTCTAAA	1191	False	NA	-21	True	AATAAA	-5	NA	56900930	56859405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
ES.28599.5	chr6	-	1467	10	FSM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	-37	89	-37	-89	multi-exon	FALSE	canonical	2	7	junction_9	89.8419737478734	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAACTGTTGGTGTCCGC	9797	False	NA	-7	True	TATAAA	-26	NA	56878908	56859473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56878822
ES.28599.6	chr6	-	1653	10	FSM	ENSMUSG00000029780.15	ENSMUST00000135558.8	1125	10	-44	-484	12	-100	multi-exon	FALSE	canonical	0	0	junction_8	94.7356295496728	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTGTCTTAAAAACTG	1216	False	NA	-18	True	TATAAA	-15	NA	56900905	56859484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56890790_56890880_56900656
ES.28599.8	chr6	-	1359	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	20	297	20	254	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTAGTTTGGTGTTC	1224	False	NA	NA	False	NA	NA	NA	56900897	56859681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ES.28599.9	chr6	-	1414	10	FSM	ENSMUSG00000029780.15	ENSMUST00000152447.9	1067	10	-126	-221	-13	221	multi-exon	FALSE	canonical	3	11	junction_9	88.9986821930458	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAGAAAGATGGCTCC	1191	False	NA	NA	False	ATTAAA	-16	NA	56900930	56859714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56900656
ES.286.1	chr1	+	1995	1	NIC	ENSMUSG00000087589.4	novel	910	3	NA	NA	5260	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36602699	36604694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36602700_36604700
ES.2860.1	chr10	-	3043	6	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAATTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60138008	60133443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60135007_60135240_60135837_60135925_60136081_60136312_60136396_60136550_60136661_60137472
ES.2860.2	chr10	-	2979	6	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAATTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60138008	60133443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60135007_60135240_60135337_60135555_60135837_60135925_60136081_60136312_60136661_60137472
ES.2860.3	chr10	-	4331	2	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60138008	60133445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60136081_60136312
ES.2860.4	chr10	-	2792	7	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60138008	60133475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60135007_60135240_60135337_60135555_60135837_60135925_60136081_60136312_60136396_60136550_60136661_60137472
ES.2860.5	chr10	-	2881	6	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60138008	60133475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60135007_60135240_60135337_60135555_60136081_60136312_60136396_60136550_60136661_60137472
ES.2860.6	chr10	-	4530	1	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60138005	60133475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60133500_60138000
ES.2860.7	chr10	-	4064	3	Antisense	novelGene_ENSMUSG00000004207.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60138008	60133478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60135007_60135240_60136081_60136312
ES.28600.1	chr6	+	708	3	NNC	ENSMUSG00000071893.8	novel	2235	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	56901006	56905392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_56901186_56904008_56904045_56904899
ES.28601.1	chr6	-	5647	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	-79	-8	-37	8	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	57512490	57483478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ES.28601.2	chr6	-	2915	8	NNC	ENSMUSG00000037826.6	novel	5560	7	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.52545131594678	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCAGTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	57512460	57483481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_57484918_57487616_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ES.28601.3	chr6	-	3849	6	ISM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	10240	1496	-9579	-1496	3prime_fragment	FALSE	canonical	3	10	junction_2	2.57681974534503	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTTTCTGTTTTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	57502171	57484982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721
ES.28601.4	chr6	-	3575	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	-81	2066	-39	-2066	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAAGGTCTTTTCATG	NA	False	NA	NA	False	ATTAAA	-13	NA	57512492	57485552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ES.28601.5	chr6	-	3820	4	ISM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	18543	2099	-1276	-2099	3prime_fragment	FALSE	canonical	3	10	junction_2	2.82842712474619	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTAAAATTAAATTAA	NA	False	NA	NA	False	NA	NA	NA	57493868	57485585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577
ES.28601.6	chr6	-	2662	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	-63	2961	-21	-2961	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGAATGTGTGCTTG	NA	False	NA	NA	False	TATAAA	-18	NA	57512474	57486447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ES.28601.7	chr6	-	3556	1	Intergenic	novelGene_23797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57510249	57506693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_57506700_57510200
ES.28601.8	chr6	-	4910	2	NNC	ENSMUSG00000037826.6	novel	264	2	NA	NA	-40	3958	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCATGTTGCTCTGTCTC	NA	False	NA	NA	False	AATAAA	-27	NA	57512493	57507461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_57512227_57512348
ES.28602.1	chr6	-	228	1	Intergenic	novelGene_23798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAATCATGGAGTCAA	NA	False	NA	29	True	AAAACA	-19	NA	57513492	57513264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_57513300_57513500
ES.28603.1	chr6	+	1414	10	NNC	ENSMUSG00000029798.12	novel	4767	23	NA	NA	27040	-1554	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	4.43331940961333	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTCTGTAAAACATT	5036	False	NA	NA	False	AATAAA	-22	NA	57614850	57640063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_57614910_57623111_57623217_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637147_57639050_57639235_57639327_57639431_57639684
ES.28603.2	chr6	+	1553	11	NNC	ENSMUSG00000029798.12	novel	4767	23	NA	NA	27041	-1522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.18555686498567	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGATGCTTTTGAATG	5037	False	NA	NA	False	AAAACA	-15	NA	57614851	57640095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_57614910_57623111_57623217_57624049_57624158_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637147_57639050_57639235_57639327_57639431_57639684
ES.28603.3	chr6	+	1256	9	NNC	ENSMUSG00000029798.12	novel	4767	23	NA	NA	27048	-1542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.58478359553296	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTGCTGCATTCTT	5044	False	NA	NA	False	AATAAA	-34	NA	57614858	57640075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_57614910_57623111_57623217_57624049_57624158_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637164_57639684
ES.28604.1	chr6	-	1797	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	52	1724	52	-1724	multi-exon	FALSE	canonical	3	182	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATTTTCAATATTATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	57669011	57665284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57666864_57668793
ES.28604.2	chr6	-	1108	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	2	2463	2	-2463	multi-exon	FALSE	canonical	3	182	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCAAGCCCAGTTTGCA	NA	False	NA	NA	False	AATAAA	-19	NA	57669061	57666023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57666864_57668793
ES.28604.3	chr6	-	816	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	-16	2773	-16	-2773	multi-exon	FALSE	canonical	3	182	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGATCTGTTTGTCTTA	NA	False	NA	NA	False	TATAAA	-15	NA	57669079	57666333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57666864_57668793
ES.28605.1	chr6	+	3645	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	-173	-963	-77	6	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTCTTAATATTTTCT	NA	False	NA	14	True	AATAAA	-24	NA	57679447	57716430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ES.28605.2	chr6	+	3051	9	NNC	ENSMUSG00000062190.13	novel	2509	9	NA	NA	-53	6	intron_retention	FALSE	canonical	0	0	junction_2	24.3515913237718	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTCTTAATATTTTCT	NA	False	NA	14	True	AATAAA	-24	NA	57680018	57716430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_57680249_57689972_57690091_57699504_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ES.28605.3	chr6	+	1919	10	NIC	ENSMUSG00000062190.13	novel	1948	10	NA	NA	-12	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.6084312204635	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTCTTAATATTTTC	NA	False	NA	13	True	AATAAA	-23	NA	57680059	57716429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640_57714944_57716056
ES.28606.1	chr6	-	3185	7	NNC	ENSMUSG00000037788.15	novel	769	6	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.2192186706253	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGATTTTTTTGGGG	NA	False	NA	0	True	AATAAA	-16	NA	57802138	57729247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57768066_57768180_57785520_57785678_57801911
ES.28606.2	chr6	-	3077	6	FSM	ENSMUSG00000037788.15	ENSMUST00000204878.3	769	6	-8	-2300	1	2	multi-exon	FALSE	canonical	2	6	junction_5	6.01331855134916	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGATTTTTTTGGGG	NA	False	NA	0	True	AATAAA	-16	NA	57802143	57729247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57785520_57785678_57801911
ES.28606.3	chr6	-	2826	4	NIC	ENSMUSG00000037788.15	novel	2919	5	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	8.99382504215469	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGTGATTTTTTTGG	NA	False	NA	-2	True	AATAAA	-14	NA	57802110	57729249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_57731662_57739419_57739557_57751695_57751774_57801911
ES.28606.4	chr6	-	2949	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	-30	0	-30	0	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGTGATTTTTTTGG	NA	False	NA	-2	True	AATAAA	-14	NA	57802174	57729249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ES.28606.5	chr6	-	547	4	NNC	ENSMUSG00000037788.15	novel	769	6	NA	NA	23	-45940	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	57802098	57785491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_57785678_57790202_57790285_57792150_57792243_57801911
ES.28607.1	chr6	+	493	1	FSM	ENSMUSG00000071419.8	ENSMUST00000121788.2	438	1	-22	-33	-22	33	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGGGGGGGGAAGAAG	NA	False	NA	13	True	AATAAA	-20	NA	57994468	57994961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_57994500_57995000
ES.28608.1	chr6	+	2460	18	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-86	-61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	68.0509172284999	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTTCTTTTCTTCA	NA	False	NA	15	True	ATTAAA	-22	NA	58572873	58669435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58573003_58573959_58574094_58612502_58612647_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.10	chr6	+	5395	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-48	-3169	-30	4	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCTGTTTGCAGATAG	NA	False	NA	NA	False	NA	NA	NA	58617500	58672665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.2	chr6	+	2269	17	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-75	-63	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	52.4486355875918	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGTGTTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-20	NA	58572884	58669433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58573003_58573993_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.3	chr6	+	2325	18	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-48	-63	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	67.310621176627	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGTGTTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-20	NA	58572911	58669433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58573003_58573993_58574094_58627445_58627529_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.4	chr6	+	5636	18	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	68.0509172284999	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGTCTGTTGTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	58572919	58672657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58573003_58573959_58574094_58612502_58612647_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.5	chr6	+	2996	15	NIC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-30	-63	intron_retention	FALSE	canonical	0	0	junction_1	49.4009522340679	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCAGTGTTCTTTTCTT	NA	False	NA	13	True	ATTAAA	-20	NA	58572929	58669433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58574094_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.6	chr6	+	5812	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-109	14	-109	-14	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTTCTAACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	58573546	58672647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.7	chr6	+	2626	16	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	-104	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.6906535146508	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCATATCCAGTGTTCT	NA	False	NA	7	True	ATTAAA	-14	NA	58573551	58669427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648955_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.8	chr6	+	2553	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-62	3226	-62	-61	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTTCTTTTCTTCA	NA	False	NA	15	True	ATTAAA	-22	NA	58573593	58669435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28608.9	chr6	+	2171	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	-54	61	-36	-61	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTTCTTTTCTTCA	NA	False	NA	15	True	ATTAAA	-22	NA	58617494	58669435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ES.28609.1	chr6	-	175	1	Intergenic	novelGene_23799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	58589597	58589422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58589400_58589600
ES.2861.1	chr10	+	4417	7	FSM	ENSMUSG00000020101.15	ENSMUST00000020301.14	4846	7	56	373	0	-373	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCACGTGTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	60182685	60208090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_60182883_60193620_60194047_60194722_60194774_60199979_60200088_60203544_60203573_60204307_60204505_60204680
ES.28610.1	chr6	-	6221	1	Intergenic	novelGene_23800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCACAAAAGAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58627389	58621168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58621200_58627400
ES.28610.2	chr6	-	2352	1	Intergenic	novelGene_23801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTAGGAGAATGGATC	NA	False	NA	NA	False	AAGAAA	-8	NA	58624063	58621711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58621700_58624100
ES.28611.1	chr6	-	933	1	Intergenic	novelGene_23802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCATGCGTGCATCAA	NA	False	NA	NA	False	NA	NA	NA	58657679	58656746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58656700_58657700
ES.28612.1	chr6	-	2542	1	Intergenic	novelGene_23803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCCTAATTGACCCT	NA	False	NA	NA	False	NA	NA	NA	58796697	58794155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58794200_58796700
ES.28613.1	chr6	+	3871	25	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-2	-1395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.9239002751866	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTTTTTATTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	58808447	58895988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.10	chr6	+	3724	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	8	-1397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	10.597820512819	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTATTTTTTTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	58808457	58895986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.11	chr6	+	4831	24	NNC	ENSMUSG00000029804.18	novel	418	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.768240878897	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808457	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808628_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.12	chr6	+	5253	26	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	8.031537835309	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808458	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.14	chr6	+	4959	26	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96963767384168	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808462	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808628_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.15	chr6	+	3721	25	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	13	-1393	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	7.34551544973001	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTTTTTATTGTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	58808462	58895990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.16	chr6	+	5886	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	13	-4662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	10.237260975834	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58808462	58874874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58872264
ES.28613.17	chr6	+	4961	25	NNC	ENSMUSG00000029804.18	novel	418	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	11.6261200177302	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808462	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808628_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.18	chr6	+	5238	25	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.9239002751866	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACAGTTTGTATTGTA	NA	False	NA	7	True	AATAAA	-15	NA	58808465	58897377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853880_58862043_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.19	chr6	+	5459	26	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-11	-1398	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	10.6883113727099	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTATTTTTTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	58808476	58895985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58851851_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.2	chr6	+	3861	26	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	3	-1398	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	8.031537835309	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTATTTTTTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	58808452	58895985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.20	chr6	+	5084	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.5580692771522	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACAGTTTGTATTGTAA	NA	False	NA	8	True	AATAAA	-16	NA	58808480	58897378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862040_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871104_58871525_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.21	chr6	+	4189	24	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-6	-1396	intron_retention	FALSE	canonical	0	0	junction_14	9.93590042232049	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTTTTTTATTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	58808481	58895987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.22	chr6	+	5310	27	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	12.4145004927789	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	NA	False	NA	9	True	AATAAA	-17	NA	58808481	58897379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58851851_58851936_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.23	chr6	+	3384	24	NNC	ENSMUSG00000029804.18	novel	418	4	NA	NA	0	-1396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.768240878897	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTTTTTTATTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	58808508	58895987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808628_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.24	chr6	+	4271	22	NNC	ENSMUSG00000029804.18	novel	4731	25	NA	NA	-7834	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	9.98047981433072	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	90	False	NA	13	True	AATAAA	-21	NA	58831979	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853880_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.25	chr6	+	10270	16	NNC	ENSMUSG00000029804.18	novel	4731	25	NA	NA	-2555	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	14.3966045379535	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	3547	False	NA	9	True	AATAAA	-17	NA	58837258	58897379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58837398_58839957_58846734_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853880_58862041_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.26	chr6	+	5649	16	NNC	ENSMUSG00000029804.18	novel	4731	25	NA	NA	-1946	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	11.1582555386882	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	4156	False	NA	9	True	AATAAA	-17	NA	58837867	58897379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.27	chr6	+	3658	2	NNC	ENSMUSG00000029804.18	novel	410	2	NA	NA	-2701	-699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTGGTGGTAACTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	58846057	58850031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58847141_58847456
ES.28613.28	chr6	+	3123	13	NNC	ENSMUSG00000029804.18	novel	722	4	NA	NA	1158	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	15.1352696999059	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	NA	False	NA	9	True	AATAAA	-17	NA	58852485	58897379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58852618_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871528_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.29	chr6	+	3104	1	Intergenic	novelGene_23804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGGAA	8804	False	NA	NA	False	NA	NA	NA	58871774	58874878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_58871800_58874900
ES.28613.3	chr6	+	5128	25	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.3379525965681	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808452	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847203_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.30	chr6	+	2766	1	FSM	ENSMUSG00000029804.18	ENSMUST00000205139.2	2762	1	-436	432	-436	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAACTTGTTTCTGAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	58878296	58881062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_58878300_58881100
ES.28613.4	chr6	+	4834	25	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96743723454787	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808452	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_58808628_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.5	chr6	+	5125	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	10.597820512819	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808453	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.7	chr6	+	5021	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.5999969994295	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTTGTATTGTAAT	NA	False	NA	9	True	AATAAA	-17	NA	58808457	58897379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893485_58893766_58893870_58895697
ES.28613.8	chr6	+	5190	24	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	13.1478433402233	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACAGTTTGTATTGTA	NA	False	NA	7	True	AATAAA	-15	NA	58808457	58897377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28613.9	chr6	+	5256	25	NNC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.9239002751866	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808457	58897383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_58808918_58809386_58809522_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58862026_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ES.28614.1	chr6	-	1860	1	FSM	ENSMUSG00000055430.5	ENSMUST00000059539.5	1844	1	-17	1	-17	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCTGTACTGTCATCTA	NA	False	NA	-2	True	AATAAA	-19	NA	58884078	58882218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_58882200_58884100
ES.28615.1	chr6	-	3805	1	Intergenic	novelGene_23805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCACGATATAGAACCAAC	NA	False	NA	NA	False	NA	NA	NA	58889937	58886132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_58886100_58889900
ES.28616.1	chr6	-	4324	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	14	1448	14	-1448	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGGTTTCCTTCATAA	NA	False	NA	NA	False	AATAAA	-36	NA	59001520	58910522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
ES.28616.2	chr6	-	3968	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	7	1811	7	1684	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGTTTTCTATTTTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	59001527	58910885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
ES.28616.3	chr6	-	4605	17	NIC	ENSMUSG00000037709.14	novel	5786	18	NA	NA	-15	1682	intron_retention	FALSE	canonical	1	1	junction_13	2.90473750965556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACGTTTTCTATTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	59001443	58910887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_58912697_58916280_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
ES.28616.4	chr6	-	4362	1	FSM	ENSMUSG00000037709.14	ENSMUST00000204616.2	4309	1	-55	2	6	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59001483	58997121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_58997100_59001500
ES.28617.1	chr6	+	1185	2	Intergenic	novelGene_23806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACGTGGTGTTCCATC	NA	False	NA	NA	False	NA	NA	NA	59050502	59056536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59050776_59055624
ES.28617.2	chr6	+	1123	2	Intergenic	novelGene_23807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTGGTGTTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	59050502	59056538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59050712_59055624
ES.28618.1	chr6	+	1225	1	Intergenic	novelGene_23809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAACAACAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	59168657	59169882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59168700_59169900
ES.28619.1	chr6	+	3040	2	NNC	ENSMUSG00000049232.4	novel	3007	2	NA	NA	-9442	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGATGACTTTTTCTG	NA	False	NA	7	True	NA	NA	NA	59176412	59189016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_59176760_59186323
ES.28619.2	chr6	+	1516	1	Intergenic	novelGene_23810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATCCTAACTCAAAA	NA	False	NA	NA	False	NA	NA	NA	59177100	59178616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59177100_59178600
ES.28619.3	chr6	+	2854	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	-58	211	-58	-211	multi-exon	FALSE	canonical	3	130	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGTTTTGGATTACT	NA	False	NA	11	True	AATAAA	-21	NA	59185796	59188807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_59186167_59186323
ES.28619.4	chr6	+	3035	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	-28	0	-28	0	multi-exon	FALSE	canonical	3	130	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	9	True	NA	NA	NA	59185826	59189018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_59186167_59186323
ES.28619.5	chr6	+	3426	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	-25	-394	-25	394	multi-exon	FALSE	canonical	3	130	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTCATGTTTATTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	59185829	59189412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_59186167_59186323
ES.28619.6	chr6	+	3143	1	NIC	ENSMUSG00000049232.4	novel	3007	2	NA	NA	15	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATTTTGATGACTTTT	NA	False	NA	3	True	NA	NA	NA	59185869	59189012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_59185900_59189000
ES.28619.7	chr6	+	413	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	60	2534	60	-2534	multi-exon	FALSE	canonical	3	130	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTGACATCACTTGT	NA	False	NA	25	True	AATGAA	-19	NA	59185914	59186484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_59186167_59186323
ES.28619.8	chr6	+	6483	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	60	-3536	60	3536	multi-exon	FALSE	canonical	3	130	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAATGTACAGATTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	59185914	59192554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_59186167_59186323
ES.2862.1	chr10	+	1875	1	Intergenic	novelGene_2189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	6259	False	NA	NA	False	NA	NA	NA	60386911	60388786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60386900_60388800
ES.28620.1	chr6	-	3683	4	Intergenic	novelGene_23808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTAATAATAATTTACCA	NA	False	NA	NA	False	NA	NA	NA	59185728	59159441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_59159799_59159850_59162994_59163671_59163781_59185654
ES.28620.2	chr6	-	84	1	Intergenic	novelGene_23811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAAAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	59184439	59184355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_59184400_59184400
ES.28621.1	chr6	+	4760	2	Intergenic	novelGene_23812	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTGGAGCATGTGT	NA	False	NA	NA	False	NA	NA	NA	59195105	59202290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59199781_59202205
ES.28622.1	chr6	+	767	1	Intergenic	novelGene_23813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAGGAAATTGGAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	59243911	59244678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59243900_59244700
ES.28623.1	chr6	+	176	1	Intergenic	novelGene_23814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGCGGGTC	NA	False	NA	NA	False	NA	NA	NA	59338441	59338617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_59338400_59338600
ES.28624.1	chr6	-	5656	2	FSM	ENSMUSG00000045441.6	ENSMUST00000051065.6	8339	2	-31	2714	-31	-2714	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTCTGGTAGTTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	59403310	59326924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_59332415_59403144
ES.28625.1	chr6	-	173	1	Intergenic	novelGene_23815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATCTGTAA	NA	False	NA	NA	False	NA	NA	NA	60268651	60268478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_60268500_60268700
ES.28626.1	chr6	-	218	1	Intergenic	novelGene_23816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACTTATTGTATACTA	NA	False	NA	NA	False	NA	NA	NA	60284709	60284491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_60284500_60284700
ES.28627.1	chr6	+	6181	5	Antisense	novelGene_ENSMUSG00000046764.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGTATTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	60289272	60350043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_60289485_60320675_60320811_60322024_60322127_60334331_60339741_60349720
ES.28627.2	chr6	+	9264	3	Antisense	novelGene_ENSMUSG00000046764.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGGTCTTACTCCCC	NA	False	NA	NA	False	NA	NA	NA	60316837	60339520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_60320811_60322024_60322127_60334331
ES.28627.3	chr6	+	6525	4	Antisense	novelGene_ENSMUSG00000046764.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGTATTGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	60320119	60350043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_60320811_60322024_60322127_60334331_60339741_60349720
ES.28627.4	chr6	+	2287	1	Intergenic	novelGene_23818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60324137	60326424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_60324100_60326400
ES.28627.5	chr6	+	4402	2	Antisense	novelGene_ENSMUSG00000046764.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAGGTGGAGTCTTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	60336860	60351242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_60339741_60349720
ES.28628.1	chr6	-	552	1	Intergenic	novelGene_23817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60323974	60323422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_60323400_60324000
ES.28629.1	chr6	+	3746	1	Intergenic	novelGene_23819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATAGTGGATTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	60354584	60358330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_60354600_60358300
ES.2863.1	chr10	-	4243	22	ISM	ENSMUSG00000012819.17	ENSMUST00000105462.8	10592	66	333674	2	-2074	0	3prime_fragment	FALSE	canonical	0	0	junction_3	0.699854212223765	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCCTGACTTGGTGCCG	2975	False	NA	NA	False	AAAAAG	-25	NA	60159438	60138528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60159067
ES.2863.2	chr10	-	10018	63	NNC	ENSMUSG00000012819.17	novel	11090	70	NA	NA	321	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.689032560106253	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAATACCCTGACTTGG	NA	False	NA	NA	False	AAAAAG	-20	NA	60522715	60138533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60139230_60141714_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60159067_60159527_60160711_60160916_60161801_60161928_60163149_60163253_60165584_60165693_60166932_60167143_60167486_60167621_60171812_60171994_60172996_60173117_60173419_60173642_60212567_60212796_60213472_60213602_60214525_60214655_60214975_60215126_60218432_60218535_60220638_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322768_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394_60433538_60485868_60485947_60493045_60493118_60522671
ES.2863.3	chr10	-	176	1	Intergenic	novelGene_2187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAACACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	60163639	60163463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60163500_60163600
ES.2863.4	chr10	-	182	1	Intergenic	novelGene_2188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60362933	60362751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60362800_60362900
ES.2863.5	chr10	-	1760	9	NNC	ENSMUSG00000012819.17	novel	438	2	NA	NA	-16	55098	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.484122918275927	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATTGCATCAAATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	60523052	60363759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60364381_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394_60433538_60485868_60485947_60493045_60493118_60522671
ES.2863.6	chr10	-	301	1	Intergenic	novelGene_2190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAAAGGCATGGGT	NA	False	NA	NA	False	NA	NA	NA	60423269	60422968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60423000_60423300
ES.2863.7	chr10	-	158	1	Intergenic	novelGene_2191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	60424157	60423999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60424000_60424200
ES.2863.8	chr10	-	2977	1	Intergenic	novelGene_2192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGGGGCATAGAACATG	NA	False	NA	NA	False	NA	NA	NA	60484226	60481249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60481200_60484200
ES.28630.1	chr6	+	4755	5	Intergenic	novelGene_23820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATGATTATCCACTAT	NA	False	NA	NA	False	AAAACA	-43	NA	60384108	60432751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_60384572_60388308_60388388_60404292_60404456_60426629_60426686_60428757
ES.28630.2	chr6	+	2361	4	Intergenic	novelGene_23821	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCTTGGTCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	60387585	60407498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_60387708_60388308_60388388_60404292_60404456_60405501
ES.28631.1	chr6	-	176	1	Intergenic	novelGene_23822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGCAAGCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	60689614	60689438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_60689400_60689600
ES.28632.1	chr6	-	1143	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	137	0	5	0	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTTCCTGGTTCCTT	7711	False	NA	-6	True	AATAAA	-20	NA	60805851	60708562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
ES.28633.1	chr6	+	4304	1	Intergenic	novelGene_23823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAGTAAAATAATA	NA	False	NA	NA	False	GATAAA	-16	NA	61087119	61091423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_61087100_61091400
ES.28634.1	chr6	+	3787	10	NIC	ENSMUSG00000039578.18	novel	5657	11	NA	NA	-177	4	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTATGTGCTCTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	61157130	61797570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_61157638_61287797_61289157_61290637_61290820_61350944_61351039_61399940_61400062_61547653_61547862_61615422_61615498_61695128_61695213_61787614_61787693_61796491
ES.28634.2	chr6	+	5898	6	NIC	ENSMUSG00000039578.18	novel	5657	11	NA	NA	-24	3239	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.8	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTATGAGTATCCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	61157283	61450488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_61157638_61287797_61289157_61290637_61290820_61350944_61351039_61399940_61400062_61446700
ES.28634.3	chr6	+	2869	10	NIC	ENSMUSG00000039578.18	novel	5657	11	NA	NA	-12	-236	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTATATCATTTGGTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	61157295	61796869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_61157586_61287797_61289157_61290637_61290820_61350944_61351039_61399940_61400062_61547653_61547862_61615422_61615498_61695128_61695213_61787614_61787693_61796491
ES.28635.1	chr6	-	4801	1	Genic_Genomic	ENSMUSG00000097924.3	novel	NA	NA	NA	NA	226	237	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGAGAAATATAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	61157568	61152767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_61152800_61157600
ES.28636.1	chr6	-	180	1	Intergenic	novelGene_23824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	61700011	61699831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_61699800_61700000
ES.28637.1	chr6	-	181	1	Intergenic	novelGene_23825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAATGAATA	NA	False	NA	NA	False	NA	NA	NA	64215503	64215322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_64215300_64215500
ES.28638.1	chr6	+	140	1	Intergenic	novelGene_23826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64495645	64495785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64495600_64495800
ES.28639.1	chr6	+	208	1	Intergenic	novelGene_23827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGTAGTATTATTAAATA	NA	False	NA	NA	False	NA	NA	NA	64524972	64525180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64525000_64525200
ES.2864.1	chr10	-	5300	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	-60	0	-48	0	multi-exon	FALSE	canonical	3	34	junction_2	5.08330601085553	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	-5	True	AATAAA	-21	NA	60588621	60547850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
ES.2864.2	chr10	-	5187	5	NIC	ENSMUSG00000020100.16	novel	5240	6	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	18.6145104689863	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	-5	True	AATAAA	-21	NA	60588591	60547850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60552270_60556639_60556803_60559542_60559770_60586164_60586464_60588512
ES.2864.4	chr10	-	4744	3	NIC	ENSMUSG00000020100.16	novel	3123	5	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	22	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTTGGTTGGTGTCTCC	NA	False	NA	-8	True	AATAAA	-18	NA	60588541	60547853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60552270_60586164_60586464_60588512
ES.2864.6	chr10	-	4828	4	NIC	ENSMUSG00000020100.16	novel	3123	5	NA	NA	19	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.2374789822141	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTTGGTTGGTGTCTCC	NA	False	NA	-8	True	AATAAA	-18	NA	60588542	60547853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60552270_60566348_60566432_60586164_60586464_60588512
ES.28640.1	chr6	-	196	1	Intergenic	novelGene_23828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCAGGTCCTAAATAGG	NA	False	NA	NA	False	NA	NA	NA	64713129	64712933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_64712900_64713100
ES.28641.1	chr6	+	1906	1	Intergenic	novelGene_23829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	64874519	64876425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64874500_64876400
ES.28642.1	chr6	+	138	1	Intergenic	novelGene_23830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATTTAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	64965633	64965771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64965600_64965800
ES.28643.1	chr6	+	221	1	Intergenic	novelGene_23831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAAGTTTTTTTCG	NA	False	NA	67	True	NA	NA	NA	64977842	64978063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64977800_64978100
ES.28644.1	chr6	+	159	1	Intergenic	novelGene_23833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64981873	64982032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64981900_64982000
ES.28645.1	chr6	+	158	1	Intergenic	novelGene_23834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64987288	64987446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64987300_64987400
ES.28646.1	chr6	+	4098	1	Intergenic	novelGene_23835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTGTGTGCTCATT	NA	False	NA	NA	False	NA	NA	NA	64988665	64992763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_64988700_64992800
ES.28647.1	chr6	+	4897	24	NNC	ENSMUSG00000029920.10	novel	4179	22	NA	NA	-19380	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.1387907005779	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTTTGTAATGGTT	NA	False	NA	25	True	AATAAA	-27	NA	65000186	65093042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65000272_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.10	chr6	+	1025	7	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	176.414914965323	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	1722	False	NA	NA	False	NA	NA	NA	65019587	65044422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044032_65044123_65044265
ES.28647.11	chr6	+	5014	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-3	-13	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	117.678226238143	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1724	False	NA	15	True	AATAAA	-17	NA	65019589	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.12	chr6	+	4817	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-3	-13	combination_of_known_splicesites	FALSE	canonical	2	3	junction_22	93.5517821872637	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1724	False	NA	15	True	AATAAA	-17	NA	65019589	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65091284
ES.28647.13	chr6	+	4718	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	-3	453	-3	10	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGTAGCTCATACTT	1724	False	NA	NA	False	AATAAA	-26	NA	65019589	65092592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.14	chr6	+	4367	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_22	93.5517821872637	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	1724	False	NA	NA	False	AATAAA	-16	NA	65019589	65092582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65091284
ES.28647.15	chr6	+	7155	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	6	-1	intron_retention	FALSE	canonical	1	3	junction_3	105.553093638034	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1733	False	NA	NA	False	AATAAA	-15	NA	65019598	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65020819_65021093_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759
ES.28647.16	chr6	+	4644	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	118.816823303773	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1733	False	NA	NA	False	AATAAA	-15	NA	65019598	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.17	chr6	+	4548	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	138.364849572506	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	1741	False	NA	NA	False	AATAAA	-16	NA	65019606	65092582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075778_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.19	chr6	+	6771	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	3	4	intron_retention	FALSE	canonical	3	279	junction_1	40.1289502059062	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATTATTGTAGCTC	1742	False	NA	NA	False	AATAAA	-20	NA	65019607	65092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.2	chr6	+	5139	27	NNC	ENSMUSG00000029920.10	novel	4179	22	NA	NA	-19328	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.430803439668	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	NA	False	NA	15	True	AATAAA	-17	NA	65000238	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65000272_65004584_65004625_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.20	chr6	+	8731	21	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	4	-13	intron_retention	FALSE	canonical	3	279	junction_1	41.4928909573676	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1743	False	NA	15	True	AATAAA	-17	NA	65019608	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65087537_65088759_65088870_65091284
ES.28647.21	chr6	+	7218	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	4	-11	intron_retention	FALSE	canonical	3	279	junction_1	40.1289502059062	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1743	False	NA	17	True	AATAAA	-19	NA	65019608	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.23	chr6	+	4936	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	8	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	118.186462552001	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTCACACCCT	1747	False	NA	14	True	AATAAA	-16	NA	65019612	65093031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65081129_65081163_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.25	chr6	+	9274	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_10	91.7097830660334	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1747	False	NA	17	True	AATAAA	-19	NA	65019612	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.26	chr6	+	6393	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	13	-16	intron_retention	FALSE	canonical	3	279	junction_1	39.884777228229	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTGTATTTCACACC	1752	False	NA	12	True	AATAAA	-14	NA	65019617	65093029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.27	chr6	+	5082	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	118.816823303773	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCACACCCTTTGTAAT	1752	False	NA	21	True	AATAAA	-23	NA	65019617	65093038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.29	chr6	+	3437	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-8	-987	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTAATGCTTTAGAAAT	1777	False	NA	NA	False	NA	NA	NA	65019642	65091595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.3	chr6	+	4906	24	NNC	ENSMUSG00000029920.10	novel	4179	22	NA	NA	-5787	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.1387907005779	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTTCACACCCTTTGT	NA	False	NA	18	True	AATAAA	-20	NA	65013779	65093035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65013881_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.30	chr6	+	1135	2	NIC	ENSMUSG00000029920.10	novel	734	3	NA	NA	-8	-20	intron_retention	FALSE	canonical	3	133	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATTCAAACCAA	1777	False	NA	-15	True	NA	NA	NA	65019642	65021167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65020430_65020819
ES.28647.31	chr6	+	882	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	-168	20	1	-20	multi-exon	FALSE	canonical	3	133	junction_2	64	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATTCAAACCAA	1786	False	NA	-15	True	NA	NA	NA	65019651	65021167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65019946_65020189_65020430_65020819
ES.28647.33	chr6	+	5016	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	6	145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.3411935716977	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGGCCAGTGTCATTA	1791	False	NA	NA	False	CATAAA	-21	NA	65019656	65093190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044121_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.34	chr6	+	5103	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	65	0	7	0	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1792	False	NA	28	True	AATAAA	-30	NA	65019657	65093045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.35	chr6	+	4684	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	24	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.4143240863968	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAAGTTGTATTTCACA	1809	False	NA	10	True	AATAAA	-12	NA	65019674	65093027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65051884_65052036_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.36	chr6	+	1155	7	NNC	ENSMUSG00000029920.10	novel	2821	10	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	143.665603244324	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	1825	False	NA	NA	False	NA	NA	NA	65019690	65044422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65044265
ES.28647.4	chr6	+	4415	26	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-2554	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.318029304962	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	NA	False	NA	15	True	AATAAA	-17	NA	65017012	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65017329_65019435_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284_65091593_65092574
ES.28647.40	chr6	+	4602	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	84	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	137.881988339062	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1869	False	NA	NA	False	AATAAA	-15	NA	65019734	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019899_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.41	chr6	+	4897	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-15	-12	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	87.7829424805765	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTCACACCCTTT	1939	False	NA	16	True	AATAAA	-18	NA	65019804	65093033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019899_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.42	chr6	+	4514	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	141.451628930289	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1941	False	NA	NA	False	AATAAA	-15	NA	65019806	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019965_65020189_65020430_65029603_65029782_65033386_65033556_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075777_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.43	chr6	+	11412	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_12	172.924035683887	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1941	False	NA	NA	False	AATAAA	-15	NA	65019806	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65067171_65067740_65067845_65069478_65069579_65070664_65070828_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65087537_65088759_65088870_65091284
ES.28647.45	chr6	+	4554	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	118.352397231976	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1964	False	NA	NA	False	AATAAA	-15	NA	65019829	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.46	chr6	+	6995	23	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-8	-6	intron_retention	FALSE	canonical	0	0	junction_12	145.463692894183	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAGATTTGTTAATT	1968	False	NA	NA	False	AATAAA	-10	NA	65019833	65092576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052822_65060787_65060988_65067079_65067171_65067740_65067845_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65088870_65091284
ES.28647.5	chr6	+	5213	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-117	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	117.910600550681	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTCACACCCT	1584	False	NA	14	True	AATAAA	-16	NA	65019449	65093031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65052674_65052822_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.51	chr6	+	4418	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.559936642278	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1969	False	NA	NA	False	AATAAA	-15	NA	65019834	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019899_65020189_65020430_65029603_65029782_65033386_65033556_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.52	chr6	+	4472	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	92.7726656177471	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	1969	False	NA	NA	False	AATAAA	-13	NA	65019834	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073002_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.53	chr6	+	5058	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-11	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	86.0431157581836	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1969	False	NA	17	True	AATAAA	-19	NA	65019834	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65020089_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.56	chr6	+	5002	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-11	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	118.352397231976	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1969	False	NA	17	True	AATAAA	-19	NA	65019834	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.57	chr6	+	4453	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.7726656177471	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	1969	False	NA	NA	False	AATAAA	-13	NA	65019834	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075600_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.58	chr6	+	4637	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	119.489539291103	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	1969	False	NA	NA	False	AATAAA	-13	NA	65019834	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.59	chr6	+	4816	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-7	1	intron_retention	FALSE	canonical	3	261	junction_1	42.0621588439249	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGTTAATTATTGTAG	1969	False	NA	NA	False	AATAAA	-17	NA	65019834	65092583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.6	chr6	+	4543	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-41	2	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTTAATTATTGTAGC	1660	False	NA	NA	False	AATAAA	-18	NA	65019525	65092584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.60	chr6	+	859	3	NNC	ENSMUSG00000029920.10	novel	734	3	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	58.5	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTAGCAGAGCATTATG	1970	False	NA	3	True	AATAAA	-13	NA	65019835	65021185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65020089_65020189_65020430_65020819
ES.28647.61	chr6	+	5608	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-6	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	140.466923498816	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTGTATTTCACACC	1970	False	NA	12	True	AATAAA	-14	NA	65019835	65093029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65049625_65050260_65051745_65052135_65052674_65052822_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.62	chr6	+	4399	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	94.1826079292968	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	1970	False	NA	NA	False	AATAAA	-13	NA	65019835	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.63	chr6	+	4861	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-6	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	119.379175418619	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTCACACCCT	1970	False	NA	14	True	AATAAA	-16	NA	65019835	65093031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019899_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067175_65069485_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.64	chr6	+	4732	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-6	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.3715062813876	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTGTATTTCACACCC	1970	False	NA	13	True	AATAAA	-15	NA	65019835	65093030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020385_65029736_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.65	chr6	+	5768	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	93.3862034069674	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGATTTGTTAATTATTG	1970	False	NA	NA	False	AATAAA	-14	NA	65019835	65092580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65034560_65034748_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.67	chr6	+	4603	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	86.0431157581836	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGTTAATTATTGTAG	1973	False	NA	NA	False	AATAAA	-17	NA	65019838	65092583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65020089_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.68	chr6	+	4892	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.2932446086158	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGTATTTCACACCCT	1977	False	NA	14	True	AATAAA	-16	NA	65019842	65093031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052123_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.7	chr6	+	5013	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-41	9	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTTTTAGCCCTCGT	1660	False	NA	37	True	AATAAA	-39	NA	65019525	65093054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.70	chr6	+	4788	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	2	3	junction_22	94.6080321752129	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1986	False	NA	17	True	AATAAA	-19	NA	65019851	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65091284
ES.28647.71	chr6	+	5083	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	266	-181	-4	181	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTTTTATTTTCTCC	1993	False	NA	NA	False	ATTAAA	-15	NA	65019858	65093226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.72	chr6	+	4707	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	104.980876234674	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	1995	False	NA	NA	False	AATAAA	-15	NA	65019860	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65020819_65021091_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.73	chr6	+	4989	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	120.026357059143	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	1997	False	NA	15	True	AATAAA	-17	NA	65019862	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65067740_65067845_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.75	chr6	+	4616	22	ISM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	271	3919	1	2164	intron_retention	FALSE	canonical	3	261	junction_1	43.1857770321258	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTTCACTCACAATTTA	1998	False	NA	NA	False	AATAAA	-17	NA	65019863	65089126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353
ES.28647.76	chr6	+	4976	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	1	-11	intron_retention	FALSE	canonical	3	261	junction_1	41.7309366583134	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	1998	False	NA	17	True	AATAAA	-19	NA	65019863	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.78	chr6	+	4189	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.1404442523318	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	2000	False	NA	NA	False	AATAAA	-13	NA	65019865	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65019946_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.8	chr6	+	737	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	-85	-52	-1	-20	multi-exon	FALSE	canonical	3	133	junction_2	73	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATTCAAACCAA	1700	False	NA	-15	True	NA	NA	NA	65019565	65021167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65019715_65020189_65020430_65020819
ES.28647.81	chr6	+	4424	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.373449835676	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	2005	False	NA	NA	False	AATAAA	-16	NA	65019870	65092582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044127_65048975_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.82	chr6	+	5120	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	11	-11	intron_retention	FALSE	canonical	3	372	junction_8	28.2983295363075	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	2008	False	NA	17	True	AATAAA	-19	NA	65019873	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.83	chr6	+	4411	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	143.95605557158	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	2014	False	NA	NA	False	AATAAA	-15	NA	65019879	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65088759_65088870_65091284
ES.28647.84	chr6	+	4391	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	31	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	92.4419809868399	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGATTTGTTAATTAT	2028	False	NA	NA	False	AATAAA	-12	NA	65019893	65092578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075788_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.86	chr6	+	4671	25	NNC	ENSMUSG00000029920.10	novel	4179	22	NA	NA	-154	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	125.570358487007	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	2177	False	NA	NA	False	AATAAA	-16	NA	65020042	65092582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65020089_65020189_65020430_65020819_65021093_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.87	chr6	+	4431	23	ISM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	515	466	-89	-3	3prime_fragment	FALSE	canonical	3	372	junction_8	28.2983295363075	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	2242	False	NA	NA	False	AATAAA	-13	NA	65020107	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.88	chr6	+	4678	25	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	169.322670267943	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTTGTTAATTATTGT	2334	False	NA	NA	False	AATAAA	-15	NA	65020199	65092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65052674_65052822_65060787_65060988_65067079_65067171_65069478_65069579_65070664_65070828_65071114_65071175_65071273_65071377_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.9	chr6	+	2969	3	NIC	ENSMUSG00000029920.10	novel	739	4	NA	NA	-10	1719	intron_retention	FALSE	canonical	1	3	junction_2	65	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	1717	False	NA	NA	False	NA	NA	NA	65019582	65031452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65020430_65020819_65021093_65029603
ES.28647.90	chr6	+	4162	23	NNC	ENSMUSG00000029920.10	novel	726	6	NA	NA	-584	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1404442523318	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGTTAATTATTGTAG	4214	False	NA	NA	False	AATAAA	-17	NA	65029182	65092583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65029232_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.91	chr6	+	4194	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	143.158140907629	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGATTTGTTAATTATTG	4786	False	NA	NA	False	AATAAA	-14	NA	65029754	65092580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65052674_65052822_65056429_65056518_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.92	chr6	+	4263	21	NNC	ENSMUSG00000029920.10	novel	726	6	NA	NA	-762	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.2832094337717	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	8867	False	NA	15	True	AATAAA	-17	NA	65033835	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65033881_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.93	chr6	+	3823	21	NNC	ENSMUSG00000029920.10	novel	726	6	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	94.8675919373945	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTTAATTATTGTA	9554	False	NA	NA	False	AATAAA	-16	NA	65034522	65092582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65034578_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.94	chr6	+	4477	21	NIC	ENSMUSG00000029920.10	novel	635	6	NA	NA	-63	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	95.2832094337717	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTCACACCCTT	9566	False	NA	15	True	AATAAA	-17	NA	65034534	65093032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65034794_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.95	chr6	+	3276	20	NIC	ENSMUSG00000029920.10	novel	635	6	NA	NA	-9	-796	intron_retention	FALSE	canonical	0	0	junction_1	97.350638489968	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGGTTGTTCAGTCTT	9620	False	NA	NA	False	NA	NA	NA	65034588	65091786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65034794_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.96	chr6	+	3848	20	NNC	ENSMUSG00000029920.10	novel	726	6	NA	NA	3687	90	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	96.8125526990731	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTATTTTTTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	65038284	65092672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65038342_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.97	chr6	+	4470	22	NNC	ENSMUSG00000029920.10	novel	726	6	NA	NA	3708	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.504318760064	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTCACACCCTTTG	NA	False	NA	17	True	AATAAA	-19	NA	65038305	65093034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65038342_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65062711_65062889_65067079_65067171_65067740_65067845_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.98	chr6	+	3885	17	ISM	ENSMUSG00000029920.10	ENSMUST00000204620.3	4179	22	29600	3	-2210	-3	3prime_fragment	FALSE	canonical	3	372	junction_2	29.0879592787119	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGATTTGTTAATTATT	6887	False	NA	NA	False	AATAAA	-13	NA	65049796	65092579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28647.99	chr6	+	5014	12	NIC	ENSMUSG00000029920.10	novel	4179	22	NA	NA	-3483	-16	intron_retention	FALSE	canonical	3	377	junction_10	23.7900597340309	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTTGTATTTCACACC	NA	False	NA	12	True	AATAAA	-14	NA	65069192	65093029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ES.28648.1	chr6	-	3689	7	Antisense	novelGene_ENSMUSG00000086176.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAAGTGTCTTGACTGT	NA	False	NA	NA	False	NA	NA	NA	65000143	64961404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_64962605_64964045_64964142_64964702_64964921_64990236_64990380_64991032_64992707_64999621_64999704_64999867
ES.28648.2	chr6	-	2449	6	Intergenic	novelGene_23832	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	0.979795897113271	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAAATTGATATAGCTAA	NA	False	NA	-10	True	AATAAA	-15	NA	65003302	64979246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_64979609_64990236_64990380_64991032_64992707_64999621_64999704_64999867_64999998_65003244
ES.28648.3	chr6	-	2674	1	Intergenic	novelGene_23836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGACTCTACTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	64997733	64995059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_64995100_64997700
ES.28649.1	chr6	-	196	1	Intergenic	novelGene_23837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCATAATCAAAGATTT	8901	False	NA	NA	False	NA	NA	NA	65013846	65013650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_65013600_65013800
ES.2865.1	chr10	+	206	1	Intergenic	novelGene_2193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACCTTTACCCTGGCA	NA	False	NA	NA	False	AAAAAG	-7	NA	60597086	60597292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60597100_60597300
ES.28650.1	chr6	-	148	1	Intergenic	novelGene_23838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2300	False	NA	NA	False	NA	NA	NA	65022452	65022304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_65022300_65022500
ES.28651.1	chr6	-	131	1	Intergenic	novelGene_23839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAGCAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	65026754	65026623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_65026600_65026800
ES.28652.1	chr6	-	1020	1	Antisense	novelGene_ENSMUSG00000029920.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGGGCGTGGTGACACA	NA	False	NA	NA	False	NA	NA	NA	65084781	65083761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_65083800_65084800
ES.28653.1	chr6	+	2567	4	FSM	ENSMUSG00000049001.6	ENSMUST00000054351.6	10101	4	293	7241	293	1645	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTGGTATATTCAAT	NA	False	NA	NA	False	TATAAA	-42	NA	65648866	65682069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65649086_65673022_65673212_65678426_65678552_65680035
ES.28654.1	chr6	+	2193	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	-41	3	-41	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65755930	65913357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.10	chr6	+	1996	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	-54	-4	-20	4	multi-exon	FALSE	canonical	3	137	junction_2	4.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	65755951	65809918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65756178_65771283_65771368_65808232
ES.28654.11	chr6	+	4756	13	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	111	junction_5	22.4641690006305	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGCTCTTGACTTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	65755954	65913359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65836463_65839898_65839979_65846164_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.12	chr6	+	3760	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-16	0	intron_retention	FALSE	canonical	3	12	junction_4	41.5985320633131	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755955	65913360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833158_65834626_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.13	chr6	+	3946	15	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-13	-13	intron_retention	FALSE	canonical	0	0	junction_4	63.2344600575945	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755958	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833158_65833839_65834050_65834626_65836463_65839898_65839979_65846164_65846250_65847300_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.14	chr6	+	2723	17	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-4	-6315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.6756860035978	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65755967	65906803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65868969_65869145_65869799_65869886_65878757_65878844_65904900_65905006_65906093
ES.28654.15	chr6	+	2265	15	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	52.966537376278	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755969	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833158_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846324_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.17	chr6	+	1836	13	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	6	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.6662864947679	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755977	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.18	chr6	+	3591	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	13	-13	intron_retention	FALSE	canonical	1	2	junction_9	43.8746196396129	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755984	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860580_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.19	chr6	+	2396	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	14	-255	14	255	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTCTTTTAAAATAG	NA	False	NA	NA	False	AATAAA	-16	NA	65755985	65913615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.2	chr6	+	3778	15	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-30	2	intron_retention	FALSE	canonical	3	8	junction_5	51.6704628844554	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTCTTGACTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	65755941	65913362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65836463_65838071_65838124_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.20	chr6	+	6523	12	NNC	ENSMUSG00000029913.15	novel	1488	11	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	64.3532349068421	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGCTCTTGACTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	65756023	65913358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65864911_65869886_65878757_65878844_65904900_65905006_65912953
ES.28654.21	chr6	+	5294	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	11	junction_5	41.2907141730811	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65756029	65913357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65838124_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.22	chr6	+	1447	6	NNC	ENSMUSG00000029913.15	novel	1714	14	NA	NA	26	27123	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	49.239821283185	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTTGCTCTGTGGGGC	NA	False	NA	NA	False	AATAAA	-18	NA	65756034	65837037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833158_65834626_65834802_65836340
ES.28654.23	chr6	+	1975	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18398	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7238734019204	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTACGGCTCTTGACT	NA	False	NA	NA	False	ATTAAA	-9	NA	65774482	65913355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774598_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.25	chr6	+	5811	14	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18408	23	intron_retention	FALSE	canonical	0	0	junction_1	70.2527137339352	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATACTTTGTAGATTA	NA	False	NA	NA	False	AATAAA	-15	NA	65774492	65913305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774598_65808232_65808356_65832932_65833108_65834626_65838551_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65906093_65906363_65912953
ES.28654.26	chr6	+	5138	13	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18416	0	intron_retention	FALSE	canonical	1	4	junction_1	63.850247976548	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATTCAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	65774500	65913282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774602_65808232_65808356_65832932_65833158_65834626_65838124_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.27	chr6	+	4549	12	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18422	8	intron_retention	FALSE	canonical	0	0	junction_1	47.9910459968083	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTTCTTTTATGAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	65774506	65913368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774598_65808232_65808356_65832932_65833108_65834626_65836463_65839898_65839979_65846164_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.28	chr6	+	5012	12	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18424	0	intron_retention	FALSE	canonical	0	0	junction_1	48.0134278738599	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65774508	65913360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774598_65808232_65808356_65832932_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.29	chr6	+	1788	2	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18424	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	65774508	65809918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774611_65808232
ES.28654.3	chr6	+	3722	14	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	111	junction_5	22.1789387808296	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGCTCTTGACTTTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	65755942	65913359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.30	chr6	+	1465	11	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	18425	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.3	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65774509	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65774598_65808232_65808356_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.31	chr6	+	1249	1	Intergenic	novelGene_23840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAACAAGGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65776292	65777541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_65776300_65777500
ES.28654.32	chr6	+	2033	1	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	51801	4	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACTAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	65807885	65809918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65807900_65809900
ES.28654.33	chr6	+	1385	10	NIC	ENSMUSG00000029913.15	novel	1714	14	NA	NA	76998	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	46.2604008992359	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65833082	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65912953
ES.28654.34	chr6	+	3918	13	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-75661	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.559395327267	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65836413	65913357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65838551_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65861777_65861873_65863068_65863163_65878757_65878844_65904900_65905006_65905843_65905994_65906093_65906363_65912953
ES.28654.35	chr6	+	4578	10	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-75217	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	65.7984201844196	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGCTCTTGACTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	65836857	65913358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65906093_65906363_65912953
ES.28654.36	chr6	+	5448	1	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-75020	32588	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATTATTTTGTCCATA	NA	False	NA	NA	False	AATAAA	-22	NA	65837054	65842502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65837100_65842500
ES.28654.37	chr6	+	3411	1	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-8593	-6226	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	65903481	65906892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65903500_65906900
ES.28654.38	chr6	+	1449	1	FSM	ENSMUSG00000029913.15	ENSMUST00000205155.2	1920	1	-151	622	-151	12	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTTATGAAGTTTA	NA	False	NA	NA	False	ATTAAA	-26	NA	65911923	65913372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65911900_65913400
ES.28654.4	chr6	+	1616	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	-66	-62	-29	-13	multi-exon	FALSE	canonical	2	2	junction_3	49.012753442344	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755942	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.5	chr6	+	2248	16	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-29	12	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	50.1887991045368	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTTATGAAGTTTA	NA	False	NA	NA	False	ATTAAA	-26	NA	65755942	65913372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65838071_65838124_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.6	chr6	+	2222	15	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	40.7358338967709	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTACGGCTCTTGACTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	65755951	65913357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833158_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.7	chr6	+	2565	16	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-20	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.0209492461601	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755951	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756178_65771283_65771368_65832932_65833158_65833839_65834050_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65906093_65906363_65912953
ES.28654.8	chr6	+	2077	15	NNC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-20	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1338685054436	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755951	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_65756096_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ES.28654.9	chr6	+	2054	14	NIC	ENSMUSG00000029913.15	novel	2155	15	NA	NA	-20	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	44.0111604995904	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	False	NA	NA	False	AATAGA	-43	NA	65755951	65913344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65912953
ES.28655.1	chr6	-	939	2	Antisense	novelGene_ENSMUSG00000029913.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65878776	65862242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_65863161_65878755
ES.28656.1	chr6	-	178	1	Intergenic	novelGene_23841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGGGGAAACTG	NA	False	NA	NA	False	NA	NA	NA	66006687	66006509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_66006500_66006700
ES.28657.1	chr6	-	171	1	Intergenic	novelGene_23842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	66045287	66045116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_66045100_66045300
ES.28658.1	chr6	-	2612	6	NNC	ENSMUSG00000107479.2	novel	1787	2	NA	NA	103	56416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAGGAAGATTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	66442580	66372516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_66374544_66386648_66386728_66399578_66399745_66401716_66401843_66415050_66415179_66442494
ES.28658.2	chr6	-	398	2	NNC	ENSMUSG00000107479.2	novel	479	2	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCTGTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	66442703	66431175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_66431365_66442494
ES.28658.3	chr6	-	283	2	FSM	ENSMUSG00000107479.2	ENSMUST00000203449.2	479	2	198	-2	159	2	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCTGTGGCCATGG	NA	False	NA	NA	False	NA	NA	NA	66442524	66431175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_66431429_66442494
ES.28659.1	chr6	-	195	1	Intergenic	novelGene_23843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGTGGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	66480381	66480186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_66480200_66480400
ES.2866.1	chr10	-	5780	17	FSM	ENSMUSG00000020099.9	ENSMUST00000077925.7	5869	17	84	5	84	-5	multi-exon	FALSE	canonical	0	0	junction_3	0.845484328654293	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTCCTGGTCTGATGT	NA	False	NA	NA	False	AATAAA	-33	NA	60667276	60598376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60601153_60602758_60602941_60604102_60604268_60604886_60605037_60607956_60608191_60608267_60608437_60609522_60609611_60610131_60610522_60610744_60610940_60612963_60612997_60613168_60613334_60613946_60614115_60614562_60614744_60615446_60615551_60615873_60616018_60618836_60619062_60666865
ES.2866.3	chr10	-	4970	14	NIC	ENSMUSG00000020099.9	novel	5869	17	NA	NA	40400	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.863459396947832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCCAGGTC	NA	False	NA	NA	False	AATAAA	-21	NA	60616020	60598388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60601153_60602758_60602941_60604102_60604268_60604886_60605037_60607956_60608191_60608267_60608437_60609522_60609611_60610131_60610522_60610744_60610940_60612963_60612997_60613946_60614115_60614562_60614744_60615446_60615551_60615873
ES.2866.5	chr10	-	149	1	Intergenic	novelGene_2194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	60605271	60605122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60605100_60605300
ES.28660.1	chr6	-	5091	1	Antisense	novelGene_ENSMUSG00000108086.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATAGTAATACAGGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	66505490	66500399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_66500400_66505500
ES.28661.10	chr6	+	2571	5	NNC	ENSMUSG00000029910.15	novel	1725	5	NA	NA	14	300	intron_retention	FALSE	canonical	2	4	junction_4	407.038926271186	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTCTGTATCATTTA	NA	False	NA	NA	False	NA	NA	NA	66512387	66518304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516301
ES.28661.11	chr6	+	5344	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	20	2193	-15	-2193	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGATTCAACCATCTTT	NA	False	NA	NA	False	AATATA	-42	NA	66512393	66522011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.13	chr6	+	2252	5	NNC	ENSMUSG00000029910.15	novel	1725	5	NA	NA	0	2	intron_retention	FALSE	canonical	2	4	junction_4	407.038926271186	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAAGCCTTGTGT	NA	False	NA	50	True	TATAAA	-27	NA	66512408	66518006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516301
ES.28661.14	chr6	+	845	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-42	922	1	-922	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTTATTGTTCCA	NA	False	NA	NA	False	AAGAAA	-20	NA	66512409	66517053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.15	chr6	+	3530	5	FSM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	1	-1851	1	1851	multi-exon	FALSE	canonical	3	769	junction_4	89.7646227642048	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCACTACTAAAATGTCCA	NA	False	NA	NA	False	ATTAAA	-25	NA	66512409	66519855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.16	chr6	+	3116	4	NIC	ENSMUSG00000029910.15	novel	1680	5	NA	NA	1	2	intron_retention	FALSE	canonical	3	769	junction_3	41.0717529317765	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAAGCTTTAAAAGT	NA	False	NA	21	True	AATAAA	-24	NA	66512409	66517977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.17	chr6	+	1651	5	FSM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	2	27	2	2	multi-exon	FALSE	canonical	3	769	junction_4	89.7646227642048	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAAGCTTTAAAAGT	NA	False	NA	21	True	AATAAA	-24	NA	66512410	66517977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.18	chr6	+	1768	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-41	-2	2	2	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAAGCTTTAAAAGT	NA	False	NA	21	True	AATAAA	-24	NA	66512410	66517977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.2	chr6	+	1587	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	-145	6115	-145	85	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGAGTGGATGGATTG	NA	False	NA	25	True	AATATA	-15	NA	66512228	66518089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.20	chr6	+	4728	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	70	2759	-8	-2759	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	66512443	66521445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.21	chr6	+	3646	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	80	3831	2	2369	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTCTGTGACTCTAGA	NA	False	NA	NA	False	NA	NA	NA	66512453	66520373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.22	chr6	+	3590	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	2	-1867	2	1838	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACATAAAAGACCACT	NA	False	NA	NA	False	ATTAAA	-12	NA	66512453	66519842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.23	chr6	+	1099	5	NIC	ENSMUSG00000029910.15	novel	7557	6	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	408.756880676032	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAAGCCTTGTGT	NA	False	NA	50	True	TATAAA	-27	NA	66512453	66518006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66517409
ES.28661.24	chr6	+	1388	6	NNC	ENSMUSG00000029910.15	novel	1725	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	369.381970323404	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATTAAGCCTTGT	NA	False	NA	48	True	TATAAA	-25	NA	66512453	66518004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66517269_66517632
ES.28661.25	chr6	+	5555	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	38	-3868	38	-2361	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCCTCTCACTGGT	NA	False	NA	NA	False	AATACA	-17	NA	66512489	66521843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.26	chr6	+	1694	3	ISM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	2200	-347	1990	318	3prime_fragment	FALSE	canonical	3	834	junction_2	17	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGAACAAGGGTGGT	NA	False	NA	NA	False	NA	NA	NA	66514651	66518322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_66514674_66515948_66516053_66516754
ES.28661.27	chr6	+	4975	1	ISM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	6603	253	6315	-253	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGCCTTACAGCACC	2995	False	NA	NA	False	GATAAA	-19	NA	66518976	66523951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_66519000_66524000
ES.28661.28	chr6	+	1621	1	ISM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	10209	1	9921	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTATGTGTATGTGTGG	6601	False	NA	NA	False	TATAAA	-20	NA	66522582	66524203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_66522600_66524200
ES.28661.3	chr6	+	1728	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	-52	5881	-52	319	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGGAACAAGGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	66512321	66518323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.4	chr6	+	3246	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	-51	4362	-51	1838	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACATAAAAGACCACT	NA	False	NA	NA	False	ATTAAA	-12	NA	66512322	66519842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.5	chr6	+	1186	6	NNC	ENSMUSG00000029910.15	novel	1680	5	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.628857896004	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAAGCCTTGTGT	NA	False	NA	50	True	TATAAA	-27	NA	66512324	66518006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66512362_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28661.6	chr6	+	4817	7	NNC	ENSMUSG00000029910.15	novel	7557	6	NA	NA	-27	-2214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	337.534031206073	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGAAAGTCTTTTGCCT	NA	False	NA	NA	False	AATATA	-21	NA	66512346	66521990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409_66517585_66518137
ES.28661.7	chr6	+	2185	4	ISM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	-28	-2	7	2	intron_retention	FALSE	canonical	3	834	junction_3	78.0825773709404	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAAGCCTTGTGT	NA	False	NA	50	True	TATAAA	-27	NA	66512380	66518006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.8	chr6	+	1909	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	-67	-117	11	88	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGTGGATGGATTGTGT	NA	False	NA	28	True	AATATA	-18	NA	66512384	66518092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ES.28661.9	chr6	+	5194	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	14	2349	14	-2349	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGTATTATTCTTCAA	NA	False	NA	NA	False	AATACA	-29	NA	66512387	66521855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ES.28662.1	chr6	-	254	2	Antisense	novelGene_ENSMUSG00000029910.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATAACTACGCAGCC	NA	False	NA	NA	False	NA	NA	NA	66513041	66512429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_66512584_66512941
ES.28663.1	chr6	-	719	1	Intergenic	novelGene_23844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66515565	66514846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_66514800_66515600
ES.28664.1	chr6	-	490	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	-20	-47	-20	47	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCTACAG	NA	False	NA	-13	True	ATTAAA	-14	NA	66852747	66852257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_66852300_66852700
ES.28665.1	chr6	+	4177	3	NIC	ENSMUSG00000036402.14	novel	1155	5	NA	NA	-41	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	184.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCCTTTCTCTTCA	NA	False	NA	56	True	AATAAA	-14	NA	66873339	66998333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_66873512_66992708_66992828_66994447
ES.28665.10	chr6	+	1166	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	7	3075	7	2	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGCTAAAACTGAAAGCC	NA	False	NA	3	True	AATAAA	-19	NA	66873387	66995259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.11	chr6	+	710	3	NIC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	7	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	184.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTTATATTCTGTT	NA	False	NA	16	True	ATTAAA	-22	NA	66873387	66994926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_66873500_66992708_66992828_66994447
ES.28665.12	chr6	+	779	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-18	-13	8	13	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTTATATTCTGTT	NA	False	NA	16	True	ATTAAA	-22	NA	66873388	66994926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28665.13	chr6	+	1113	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-34	797	9	0	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCTTTGATGGGGTCT	NA	False	NA	17	True	AATAAA	-33	NA	66873389	66995273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ES.28665.14	chr6	+	4224	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	-22	-3077	12	0	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	False	NA	57	True	AATAAA	-15	NA	66873392	66998334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.15	chr6	+	3870	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	-12	-233	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGATTCTGTTATTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	66873394	66998101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992716_66992828_66994447
ES.28665.16	chr6	+	4130	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	14	104	-12	-104	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCACAAATGTGAGAG	NA	False	NA	12	True	AATAAA	-23	NA	66873394	66998230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.17	chr6	+	4087	4	NNC	ENSMUSG00000036402.14	novel	1155	5	NA	NA	-11	-50	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	150.139934727573	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATTGACTCCTTTCTG	NA	False	NA	7	True	ATTAAA	-22	NA	66873395	66998284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873512_66891436_66891460_66992716_66992828_66994447
ES.28665.18	chr6	+	4005	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114226.8	1155	5	-22	-2828	-11	-233	multi-exon	FALSE	canonical	2	34	junction_3	135.972423674803	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGATTCTGTTATTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	66873395	66998101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66920808_66920867_66992708_66992828_66994447
ES.28665.19	chr6	+	4165	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-26	-2263	-9	-1	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCCTTTCTCTTCA	NA	False	NA	56	True	AATAAA	-14	NA	66873397	66998333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ES.28665.2	chr6	+	4205	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-36	-3421	-10	0	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	False	NA	57	True	AATAAA	-15	NA	66873370	66998334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28665.20	chr6	+	3503	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-9	-2746	-9	-675	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCATGATGTTTGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	66873397	66997659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28665.22	chr6	+	821	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	19	3408	-7	13	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTTATATTCTGTT	NA	False	NA	16	True	ATTAAA	-22	NA	66873399	66994926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.23	chr6	+	3929	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	-22	-2031	-5	-233	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGATTCTGTTATTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	66873401	66998101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ES.28665.24	chr6	+	684	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	-3	11	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACCTTTATATTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	66873403	66994924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992716_66992828_66994447
ES.28665.25	chr6	+	4052	4	NIC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	-3	-107	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	158.01476724239	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGCTCACAAATGTGA	NA	False	NA	9	True	AATAAA	-20	NA	66873411	66998227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_66873512_66920808_66920862_66992708_66992828_66994447
ES.28665.27	chr6	+	3972	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	1	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCACAAATGTGAG	NA	False	NA	10	True	AATAAA	-21	NA	66873418	66998228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992716_66992827_66994447
ES.28665.28	chr6	+	4089	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	6	-2970	0	-107	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGCTCACAAATGTGA	NA	False	NA	9	True	AATAAA	-20	NA	66873420	66998227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.29	chr6	+	1036	4	NNC	ENSMUSG00000036402.14	novel	1155	5	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.58277539625	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTAAGGCTAAAACT	NA	False	NA	-4	True	AATAAA	-12	NA	66873422	66995252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873512_66891436_66891460_66992708_66992828_66994447
ES.28665.3	chr6	+	4274	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	-10	-16	-10	16	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCACTTGACATTGTCT	NA	False	NA	73	True	AATAAA	-31	NA	66873370	66998350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.31	chr6	+	4041	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	1	-52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCATTGACTCCTTTC	NA	False	NA	5	True	ATTAAA	-20	NA	66873424	66998282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873504_66992700_66992828_66994447
ES.28665.32	chr6	+	645	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.5	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAGTCAAAAACCTTTA	NA	False	NA	7	True	ATTAAA	-13	NA	66873428	66994917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992723_66992828_66994447
ES.28665.33	chr6	+	4019	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	15	-2158	-1	-106	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCACAAATGTGAG	NA	False	NA	10	True	AATAAA	-21	NA	66873438	66998228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ES.28665.37	chr6	+	4134	5	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	9	43819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	135.739640488694	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAGGGAATAATTAAAAAC	NA	False	NA	NA	False	GATAAA	-7	NA	66873448	67042153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447_66998331_67042142
ES.28665.38	chr6	+	802	5	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	23	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	146.024826656292	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGTCAAAAACCTTTAT	NA	False	NA	8	True	ATTAAA	-14	NA	66873462	66994918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873512_66891436_66891495_66920808_66920862_66992656_66992828_66994447
ES.28665.39	chr6	+	2269	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	74	-1595	41	438	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAGTATATCCTTTAG	NA	False	NA	NA	False	NA	NA	NA	66873480	66996508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28665.4	chr6	+	3564	5	NNC	ENSMUSG00000036402.14	novel	1125	5	NA	NA	-3	-674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	34.1540627158761	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGATGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	66873377	66997660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992827_66994447
ES.28665.40	chr6	+	1435	4	FSM	ENSMUSG00000036402.14	ENSMUST00000204862.2	380	4	-340	-715	2	-7	multi-exon	FALSE	canonical	2	28	junction_1	141.313677878525	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGAAAGCCCTTTGAT	NA	False	NA	10	True	AATAAA	-26	NA	66873534	66995266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873974_66891436_66891495_66992708_66992828_66994447
ES.28665.41	chr6	+	4502	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114222.4	1354	5	3	-3151	3	-53	multi-exon	FALSE	canonical	2	28	junction_1	134.228350209633	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGTCATTGACTCCTTT	NA	False	NA	4	True	ATTAAA	-19	NA	66873535	66998281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873974_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ES.28665.42	chr6	+	748	4	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	14580	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.775449564906	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTTATATTCTGTT	NA	False	NA	16	True	ATTAAA	-22	NA	66888454	66994926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66888547_66891436_66891495_66992708_66992828_66994447
ES.28665.43	chr6	+	158	1	Intergenic	novelGene_23846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	4843	False	NA	NA	False	NA	NA	NA	66940712	66940870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_66940700_66940900
ES.28665.44	chr6	+	4423	3	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	118135	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	183.5	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTTCTTCCCTTTCTCT	NA	False	NA	53	True	AATAAA	-11	NA	66992009	66998330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66992431_66992708_66992828_66994447
ES.28665.45	chr6	+	4020	3	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	118435	-107	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	183.5	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATGCTCACAAATGTGA	NA	False	NA	9	True	AATAAA	-20	NA	66992309	66998227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66992431_66992708_66992828_66994447
ES.28665.46	chr6	+	1750	10	NNC	ENSMUSG00000087231.8	novel	2473	7	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.10818510677892	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTGGTCCTAGCTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	67013640	67057125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67013920_67020742_67020903_67041596_67041703_67043812_67043933_67050524_67050655_67050789_67051011_67053468_67053655_67054231_67054350_67055210_67055402_67056886
ES.28665.47	chr6	+	775	3	NNC	ENSMUSG00000087231.8	novel	2473	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGAGTGTTGACAGTG	NA	False	NA	NA	False	NA	NA	NA	67013640	67040746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67013920_67020774_67020903_67040378
ES.28665.48	chr6	+	1510	1	NIC	ENSMUSG00000087231.8	novel	1764	7	NA	NA	1872	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTGGTCCTAGCTGA	2658	False	NA	NA	False	ATTAAA	-16	NA	67055615	67057125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67055600_67057100
ES.28665.6	chr6	+	4136	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTGACATTGTCTAAG	NA	False	NA	76	True	AATAAA	-34	NA	66873380	66998353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992716_66992828_66994447
ES.28665.7	chr6	+	3957	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-21	-3188	5	-233	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGATTCTGTTATTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	66873385	66998101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28665.8	chr6	+	1030	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTAAGGCTAAAACT	NA	False	NA	-4	True	AATAAA	-12	NA	66873385	66995252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_66873500_66992716_66992828_66994447
ES.28665.9	chr6	+	4086	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	-21	-3317	5	-104	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCACAAATGTGAGAG	NA	False	NA	12	True	AATAAA	-23	NA	66873385	66998230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ES.28666.1	chr6	-	3718	1	Intergenic	novelGene_23845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAGCTAGCTGTAATT	NA	False	NA	NA	False	TTTAAA	-7	NA	66880978	66877260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_66877300_66881000
ES.28667.1	chr6	-	2309	1	NIC	ENSMUSG00000036390.9	novel	1223	4	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTCTCAACGTGTGGT	NA	False	NA	-7	True	AATAAA	-19	NA	67014388	67012079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_67012100_67014400
ES.28667.2	chr6	-	1267	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	-50	6	1	-6	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTCATTTCTCAACG	NA	False	NA	-13	True	AATAAA	-13	NA	67014440	67012085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ES.28667.3	chr6	-	1306	3	NIC	ENSMUSG00000036390.9	novel	1223	4	NA	NA	2	-9	intron_retention	FALSE	canonical	3	118	junction_1	4	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTCATTTCTCA	NA	False	NA	-16	True	AATAAA	-10	NA	67014388	67012088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_67012757_67013661_67014096_67014184
ES.28667.4	chr6	-	2120	3	FSM	ENSMUSG00000036390.9	ENSMUST00000126194.2	824	3	-30	-1266	-1	-9	multi-exon	FALSE	canonical	3	118	junction_1	4	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTCATTTCTCA	NA	False	NA	-16	True	AATAAA	-10	NA	67014391	67012088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_67013900_67013993_67014096_67014184
ES.28668.1	chr6	-	4738	1	Antisense	novelGene_ENSMUSG00000087231.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAAAACAAACAAAC	NA	False	NA	NA	False	AATGAA	-45	NA	67043904	67039166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_67039200_67043900
ES.28668.2	chr6	-	2628	2	Antisense	novelGene_ENSMUSG00000087231.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAAAACAAACAAAC	NA	False	NA	NA	False	AATGAA	-45	NA	67043904	67039166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_67041701_67043810
ES.28669.1	chr6	-	186	1	Intergenic	novelGene_23847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGCTC	NA	False	NA	NA	False	NA	NA	NA	67132152	67131966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67132000_67132200
ES.2867.1	chr10	+	160	1	Intergenic	novelGene_2195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	60669638	60669798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60669600_60669800
ES.28670.1	chr6	+	3693	1	FSM	ENSMUSG00000097603.4	ENSMUST00000203974.2	3187	1	-3335	2829	-3335	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACCTCCTCCAGTCAC	NA	False	NA	NA	False	NA	NA	NA	67138572	67142265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67138600_67142300
ES.28671.1	chr6	+	327	1	FSM	ENSMUSG00000097603.4	ENSMUST00000203974.2	3187	1	1390	1470	1111	1024	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	67143297	67143624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67143300_67143600
ES.28672.1	chr6	+	166	1	Intergenic	novelGene_23848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	1812	False	NA	NA	False	NA	NA	NA	67148069	67148235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67148100_67148200
ES.28673.1	chr6	+	193	1	Intergenic	novelGene_23849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAATAAG	3086	False	NA	NA	False	NA	NA	NA	67149343	67149536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67149300_67149500
ES.28674.1	chr6	+	172	1	Intergenic	novelGene_23850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGGTTTG	6555	False	NA	NA	False	NA	NA	NA	67152812	67152984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67152800_67153000
ES.28675.1	chr6	+	330	1	FSM	ENSMUSG00000047905.11	ENSMUST00000120174.2	465	1	229	-94	229	94	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	21	True	ATTAAA	-20	NA	67182831	67183161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67182800_67183200
ES.28676.1	chr6	+	222	1	Intergenic	novelGene_23851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTATGTGTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	67183905	67184127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67183900_67184100
ES.28677.1	chr6	+	3088	1	Intergenic	novelGene_23852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCATC	NA	False	NA	NA	False	NA	NA	NA	67186718	67189806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67186700_67189800
ES.28678.1	chr6	+	471	1	Intergenic	novelGene_23853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGACAGATAGATATT	NA	False	NA	NA	False	NA	NA	NA	67197199	67197670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67197200_67197700
ES.28679.1	chr6	+	175	1	Intergenic	novelGene_23854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67199006	67199181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67199000_67199200
ES.2868.1	chr10	-	171	1	Intergenic	novelGene_2196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	5060	False	NA	NA	False	NA	NA	NA	60682192	60682021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60682000_60682200
ES.28680.1	chr6	-	198	1	Intergenic	novelGene_23855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTAC	NA	False	NA	NA	False	NA	NA	NA	67204752	67204554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67204600_67204800
ES.28681.1	chr6	+	3119	9	NNC	ENSMUSG00000036371.7	novel	665	5	NA	NA	-55	1660	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2623.79722146644	2655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTCTTGGTTTCCC	9590	False	NA	10	True	GATAAA	-23	NA	67215104	67262955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67215226_67224347_67224486_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.10	chr6	+	3851	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-105	-2129	-77	2129	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAAGTATTTTGTGTTG	5767	False	NA	26	True	AATAGA	-31	NA	67243889	67263424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.101	chr6	+	1815	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	-198	0	198	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATTTGGAAGTTGAA	5872	False	NA	7	True	NA	NA	NA	67243994	67261493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.102	chr6	+	4462	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	28	-2823	0	2818	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCCTGCTACTCTTAAA	5872	False	NA	NA	False	AATAAA	-24	NA	67243994	67264113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.103	chr6	+	1310	6	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2466.11024895482	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAAGCTTTCACTTCA	5872	False	NA	32	True	AATATA	-20	NA	67243994	67261290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67249132_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.104	chr6	+	1915	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2262.72684509426	2592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGGCTCATGCATGG	5872	False	NA	2	True	AAAACA	-11	NA	67243994	67261605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248193_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.105	chr6	+	7329	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	28	-5690	0	5685	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTTCATTTCTTTA	5872	False	NA	NA	False	GATAAA	-15	NA	67243994	67266980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.106	chr6	+	5247	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	1	-3912	0	3648	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGGAGACCTGTGTG	5872	False	NA	NA	False	CATAAA	-16	NA	67243994	67264943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.107	chr6	+	2951	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	1	-1616	0	1352	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTACTTCTTATTTTA	5872	False	NA	NA	False	TTTAAA	-1	NA	67243994	67262647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.109	chr6	+	5176	8	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	1	3804	at_least_one_novel_splicesite	FALSE	canonical	2	344	junction_1	2211.83766057428	2680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGCCTAGCCTCCATG	5873	False	NA	NA	False	ATTAAA	-15	NA	67243995	67265099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.11	chr6	+	1473	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-78	222	-50	23	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAAAGACTGAATTTT	5794	False	NA	61	True	NA	NA	NA	67243916	67261073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.111	chr6	+	1288	8	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2306.92194431083	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACCAGTTTAAAGCTT	5877	False	NA	24	True	AATATA	-12	NA	67243999	67261282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244192_67248272_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.112	chr6	+	8406	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	7	-7077	1	-6612	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCCAACGTGTTAATGT	5878	False	NA	NA	False	ATTAAA	-22	NA	67244000	67268108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.113	chr6	+	5065	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	34	-3432	1	3427	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGCAAGCTGGTTTCAA	5878	False	NA	NA	False	CATAAA	-23	NA	67244000	67264722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.114	chr6	+	1085	6	NIC	ENSMUSG00000036371.7	novel	1166	7	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	2521.68724468361	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	5879	False	NA	17	True	NA	NA	NA	67244001	67261029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248305_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.116	chr6	+	1603	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2262.72684509426	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5879	False	NA	37	True	AATATA	-25	NA	67244001	67261295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248188_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.117	chr6	+	1546	8	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2360.47131232865	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTTTCACTTCATTT	5880	False	NA	35	True	AATATA	-23	NA	67244002	67261293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249170_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.118	chr6	+	739	5	NNC	ENSMUSG00000036371.7	novel	1288	7	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2721.49640593185	2553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5880	False	NA	21	True	NA	NA	NA	67244002	67261033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.12	chr6	+	4253	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-49	-2537	-49	2532	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGCAGCCTTAGTCATT	5795	False	NA	27	True	ATTAAA	-42	NA	67243917	67263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.120	chr6	+	5210	2	ISM	ENSMUSG00000036371.7	ENSMUST00000203054.3	3153	4	13	-1421	-9	1421	intron_retention	FALSE	canonical	3	6355	junction_1	0	2407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGATGGCCTTTTACA	5890	False	NA	NA	False	AGTAAA	-3	NA	67244012	67253010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67244394_67248181
ES.28681.121	chr6	+	2419	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	407	12648	-7	777	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATATGTTATGATTTG	5892	False	NA	23	True	CATAAA	-27	NA	67244014	67262072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.122	chr6	+	1314	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2212.76948087915	2552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5904	False	NA	19	True	NA	NA	NA	67244026	67261031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258799_67260886
ES.28681.123	chr6	+	2153	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	75	-561	-13	556	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGAGGCTAGCCATT	5919	False	NA	NA	False	NA	NA	NA	67244041	67261851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.124	chr6	+	1291	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2262.72684509426	2552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATTAAAAAAAAAAAAA	5920	False	NA	12	True	NA	NA	NA	67244042	67261024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248188_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.125	chr6	+	3845	7	NIC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	-3	1650	intron_retention	FALSE	canonical	3	3189	junction_3	1196.20158093117	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCCCTTTATATGTTTC	5929	False	NA	0	True	GATAAA	-13	NA	67244051	67262945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.127	chr6	+	3609	9	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	-37	2117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2642.47499692523	2655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCAAGTGGAGTGTAAG	6081	False	NA	14	True	AATAGA	-19	NA	67244203	67263412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67250817_67250920_67254744_67254923_67258631_67258806_67260886
ES.28681.128	chr6	+	5081	7	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	833	13348	127	77	3prime_fragment	FALSE	canonical	3	2187	junction_3	1746.67137403946	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATACTGGTTTTAATA	6318	False	NA	27	True	TTTAAA	-7	NA	67244440	67261372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.129	chr6	+	1538	7	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	4184	-317	-684	317	3prime_fragment	FALSE	canonical	3	3189	junction_2	1374.65435049446	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCATGCATGGTTTATTA	NA	False	NA	9	True	AAAACA	-18	NA	67248178	67261612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.13	chr6	+	2029	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-47	-315	-47	310	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGGCTCATGCATGG	5797	False	NA	2	True	AAAACA	-11	NA	67243919	67261605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.130	chr6	+	1114	6	ISM	ENSMUSG00000036371.7	ENSMUST00000205106.3	1288	7	4196	-234	-678	-6	3prime_fragment	FALSE	canonical	1	2	junction_2	2535.16629829288	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCAGTTTAAAGCTTTC	NA	False	NA	26	True	AATATA	-14	NA	67248184	67261284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67248333_67248870_67249012_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.131	chr6	+	2667	6	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	7	1595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2340.43030231622	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAACAATTTATTTTC	NA	False	NA	-55	True	NA	NA	NA	67248869	67262890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67249012_67249122_67249213_67249847_67249927_67254744_67254923_67258631_67258806_67260886
ES.28681.132	chr6	+	3205	1	NIC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	8985	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2552	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	NA	False	NA	40	True	NA	NA	NA	67257847	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67257800_67261100
ES.28681.133	chr6	+	2237	2	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	14635	-1652	9767	1652	3prime_fragment	FALSE	canonical	3	6747	junction_1	0	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTATATGTTTCTT	NA	False	NA	2	True	GATAAA	-15	NA	67258629	67262947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67258806_67260886
ES.28681.134	chr6	+	6562	2	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	14751	-6093	9883	6093	3prime_fragment	FALSE	canonical	3	6747	junction_1	0	2694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTGAACATGAGTCCT	NA	False	NA	NA	False	AGTAAA	-17	NA	67258745	67267388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67258806_67260886
ES.28681.135	chr6	+	3221	1	NIC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	12022	2810	mono-exon	FALSE	NA	NA	NA	NA	NA	2661	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCATTAAATCCTGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	67260884	67264105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67260900_67264100
ES.28681.136	chr6	+	6551	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	17789	6773	12534	6652	mono-exon	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGAGTTTTATCTGGGG	NA	False	NA	NA	False	AATGAA	-15	NA	67261396	67267947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67261400_67267900
ES.28681.137	chr6	+	8311	2	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	14106	-3392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCTTCAAGTATGGT	NA	False	NA	75	True	NA	NA	NA	67262968	67271328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67268914_67268962
ES.28681.138	chr6	+	4576	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	19626	6911	14371	6514	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGGTGTGCTATAC	NA	False	NA	NA	False	AATAAA	-23	NA	67263233	67267809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67263200_67267800
ES.28681.139	chr6	+	6596	2	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	15751	-3462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCTTTTGACCATT	NA	False	NA	5	True	ATTAAA	-15	NA	67264613	67271258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67268916_67268964
ES.28681.14	chr6	+	1428	6	NIC	ENSMUSG00000036371.7	novel	1166	7	NA	NA	-44	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	2521.68724468361	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTTTCACTTCATTT	5800	False	NA	35	True	AATATA	-23	NA	67243922	67261293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248305_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.140	chr6	+	5227	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	22424	3462	17169	-3462	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCTTTTGACCATT	NA	False	NA	5	True	ATTAAA	-15	NA	67266031	67271258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67266000_67271300
ES.28681.141	chr6	+	4918	2	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	19399	-1492	intron_retention	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGAAAATTATTTGTT	1026	False	NA	2	True	GATAAA	-14	NA	67268261	67273228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67268914_67268962
ES.28681.142	chr6	+	2425	2	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	19920	-3462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCTTTTGACCATT	1547	False	NA	5	True	ATTAAA	-15	NA	67268782	67271258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67268914_67268964
ES.28681.143	chr6	+	3194	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	27349	570	22094	-570	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTATCGTTTTGTTCCC	515	False	NA	NA	False	AATAAA	-12	NA	67270956	67274150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67271000_67274200
ES.28681.144	chr6	+	2484	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	28629	0	23374	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGGTTTATATTTTTG	59	False	NA	NA	False	AATAAA	-17	NA	67272236	67274720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_67272200_67274700
ES.28681.15	chr6	+	3384	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	326	11764	-33	1661	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTCTTGGTTTCCCT	5811	False	NA	11	True	GATAAA	-24	NA	67243933	67262956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.16	chr6	+	4298	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	-56	-3076	-28	2812	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	2664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTAAATCCTGCTACT	5816	False	NA	NA	False	AATAAA	-18	NA	67243938	67264107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.17	chr6	+	1749	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-53	-79	-25	79	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATACTGGTTTTAATACC	5819	False	NA	29	True	TTTAAA	-9	NA	67243941	67261374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.18	chr6	+	3840	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	334	11300	-25	2125	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGTAAGTATTTTGT	5819	False	NA	22	True	AATAGA	-27	NA	67243941	67263420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.19	chr6	+	4531	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	335	10608	-24	2817	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCCTGCTACTCTTAA	5820	False	NA	NA	False	AATAAA	-23	NA	67243942	67264112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.2	chr6	+	1356	9	NNC	ENSMUSG00000036371.7	novel	665	5	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2687.21291199172	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	9624	False	NA	40	True	NA	NA	NA	67215138	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67215355_67224347_67224486_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.20	chr6	+	3358	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-24	-1667	-24	1662	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTGGTTTCCCTT	5820	False	NA	12	True	GATAAA	-25	NA	67243942	67262957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.21	chr6	+	2092	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-51	-424	-23	424	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTAAACTACTTATTG	5821	False	NA	10	True	AGTAAA	-19	NA	67243943	67261719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.22	chr6	+	3330	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-51	-1662	-23	1662	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTGGTTTCCCTT	5821	False	NA	12	True	GATAAA	-25	NA	67243943	67262957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.23	chr6	+	4481	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-47	-3098	-20	2834	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTCCTGTCACTTT	5824	False	NA	NA	False	AATAAA	-40	NA	67243946	67264129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.24	chr6	+	3308	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-47	-1925	-20	1661	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTCTTGGTTTCCCT	5824	False	NA	11	True	GATAAA	-24	NA	67243946	67262956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.25	chr6	+	10651	9	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	-20	-4435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2344.74811746912	2711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCGTACTTTGGGGA	5824	False	NA	NA	False	ATTAAA	-13	NA	67243946	67270285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886_67268914_67268962
ES.28681.26	chr6	+	6701	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	339	8434	-20	4991	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTACCATTAATC	5824	False	NA	3	True	NA	NA	NA	67243946	67266286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.28	chr6	+	1787	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	341	13346	-18	79	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATACTGGTTTTAATACC	5826	False	NA	29	True	TTTAAA	-9	NA	67243948	67261374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.29	chr6	+	1492	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	341	13641	-18	29	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGAATTTTATCTGT	5826	False	NA	67	True	NA	NA	NA	67243948	67261079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.3	chr6	+	1930	5	NNC	ENSMUSG00000036371.7	novel	397	3	NA	NA	30	-7976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.49305018890286	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATTAAAGCAGGAAGT	9675	False	NA	NA	False	ATTAAA	-36	NA	67215189	67238362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67215355_67224347_67224486_67230363_67230436_67232065_67232401_67237142
ES.28681.31	chr6	+	4518	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-44	-2857	-16	2857	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATGTCTTTCAGGTAG	5828	False	NA	NA	False	ATTAAA	-36	NA	67243950	67264152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.32	chr6	+	1420	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-36	-48	-9	29	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGAATTTTATCTGT	5835	False	NA	67	True	NA	NA	NA	67243957	67261079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.33	chr6	+	7378	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	357	7739	-2	5686	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTCATTTCTTTAC	5842	False	NA	NA	False	GATAAA	-16	NA	67243964	67266981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.34	chr6	+	1621	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-29	-256	-2	-3	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTTAAAGCTTTCACT	5842	False	NA	29	True	AATATA	-17	NA	67243964	67261287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.35	chr6	+	3994	8	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	-2	2528	at_least_one_novel_splicesite	FALSE	canonical	2	344	junction_1	2317.9172125168	2661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTGAGCAGCCTTAGT	5842	False	NA	23	True	ATTAAA	-38	NA	67243964	67263823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.36	chr6	+	7315	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-29	-5950	-2	5686	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTCATTTCTTTAC	5842	False	NA	NA	False	GATAAA	-16	NA	67243964	67266981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.37	chr6	+	2289	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-28	-925	-1	661	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTAAGTGTGTTGGG	5843	False	NA	-93	True	TATAAA	-14	NA	67243965	67261956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.38	chr6	+	6664	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-1	-4996	-1	4991	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTACCATTAATC	5843	False	NA	3	True	NA	NA	NA	67243965	67266286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.4	chr6	+	177	1	Intergenic	novelGene_23856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	67217851	67218028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67217900_67218000
ES.28681.40	chr6	+	1888	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	359	13227	0	198	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATTTGGAAGTTGAA	5844	False	NA	7	True	NA	NA	NA	67243966	67261493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.41	chr6	+	4748	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-28	-3103	0	3103	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGGCTTGTGTTTGCA	5844	False	NA	NA	False	ATTAAA	-35	NA	67243966	67264398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.42	chr6	+	1441	8	NNC	ENSMUSG00000036371.7	novel	15474	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2405.6243535956	2553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5844	False	NA	40	True	NA	NA	NA	67243966	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248187_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.43	chr6	+	1613	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-27	31	1	-26	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGGTGTGAACAGTG	5845	False	NA	6	True	NA	NA	NA	67243967	67261264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.46	chr6	+	2150	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	364	12960	0	465	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAAATCGTTTTGTGGG	5849	False	NA	51	True	NA	NA	NA	67243971	67261760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.47	chr6	+	2090	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-21	-733	1	469	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCGTTTTGTGGGTGTG	5850	False	NA	55	True	NA	NA	NA	67243972	67261764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.48	chr6	+	5476	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	6	-3815	1	3810	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGCCTCCATGTATCTC	5850	False	NA	NA	False	ATTAAA	-21	NA	67243972	67265105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.49	chr6	+	1633	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	6	28	1	-28	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATAGGTGTGAACAG	5850	False	NA	4	True	NA	NA	NA	67243972	67261262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.5	chr6	+	2146	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-453	-357	-67	93	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTGCTTTTCATTTTC	5418	False	NA	43	True	TTTAAA	-23	NA	67243540	67261388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.50	chr6	+	1408	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	344	junction_1	2164.25681263116	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAAGCTTTCACTTCAT	5851	False	NA	33	True	AATATA	-21	NA	67243973	67261291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.51	chr6	+	7433	7	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	3	5685	combination_of_known_junctions	FALSE	canonical	3	3728	junction_3	1002.47367657322	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTTCATTTCTTTA	5852	False	NA	NA	False	GATAAA	-15	NA	67243974	67266980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.52	chr6	+	1936	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-18	-582	4	318	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGCATGGTTTATTAG	5853	False	NA	10	True	AAAACA	-19	NA	67243975	67261613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.53	chr6	+	2607	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-15	-1256	7	992	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTAGTCGTCAGTTTT	5856	False	NA	NA	False	ATTAAA	-28	NA	67243978	67262287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.54	chr6	+	5331	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	371	9772	7	3653	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGACCTGTGTGTCCGC	5856	False	NA	NA	False	CATAAA	-21	NA	67243978	67264948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.55	chr6	+	5480	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	371	9623	7	3802	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATAAGCCTAGCCTCCA	5856	False	NA	NA	False	ATTAAA	-13	NA	67243978	67265097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.56	chr6	+	4762	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	372	10340	8	3085	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTGCACTGCATT	5857	False	NA	NA	False	ATTAAA	-17	NA	67243979	67264380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.57	chr6	+	2673	5	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	8	2	intron_retention	FALSE	canonical	3	5781	junction_3	346.229331513088	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5857	False	NA	40	True	NA	NA	NA	67243979	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.58	chr6	+	1948	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-14	-317	-8	317	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCATGCATGGTTTATTA	5858	False	NA	9	True	AAAACA	-18	NA	67243980	67261612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.59	chr6	+	3032	6	NIC	ENSMUSG00000036371.7	novel	1166	7	NA	NA	-8	1660	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	2521.68724468361	2635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTCTTGGTTTCCC	5858	False	NA	10	True	GATAAA	-23	NA	67243980	67262955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248305_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.6	chr6	+	2097	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-344	-86	15	81	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGGTTTTAATACCTG	5500	False	NA	31	True	TTTAAA	-11	NA	67243622	67261376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.60	chr6	+	2440	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	14	-787	-8	782	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTATGATTTGGTATT	5858	False	NA	28	True	CATAAA	-32	NA	67243980	67262077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.61	chr6	+	1347	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2253.05257780802	2552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATTAAAAAAAAAAAAA	5858	False	NA	12	True	NA	NA	NA	67243980	67261024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248883_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.63	chr6	+	1201	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	-14	-21	-8	2	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5858	False	NA	40	True	NA	NA	NA	67243980	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.64	chr6	+	3780	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	14	-2127	-8	2122	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGAGTGTAAGTATTT	5858	False	NA	19	True	AATAGA	-24	NA	67243980	67263417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.65	chr6	+	6605	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-10	-5259	-5	4995	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTACCATTAATCTTTT	5861	False	NA	7	True	NA	NA	NA	67243983	67266290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.66	chr6	+	2102	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	19	-454	-3	449	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAGCCTGTGTTCAGT	5863	False	NA	35	True	AGTAAA	-44	NA	67243985	67261744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.68	chr6	+	4158	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-9	-2532	-3	2532	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGCAGCCTTAGTCATT	5863	False	NA	27	True	ATTAAA	-42	NA	67243985	67263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.69	chr6	+	4203	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	379	10892	-2	2533	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCAGCCTTAGTCATTT	5864	False	NA	28	True	ATTAAA	-43	NA	67243986	67263828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.7	chr6	+	3940	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	-148	-2456	-121	2192	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGTGTTAAAAATTAATA	5723	False	NA	89	True	AAGAAA	-1	NA	67243845	67263487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.70	chr6	+	6618	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-8	-4993	-2	4993	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGTACCATTAATCTT	5864	False	NA	5	True	NA	NA	NA	67243986	67266288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.71	chr6	+	6292	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	379	8803	-2	4622	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTGCTTCAGTTCC	5864	False	NA	NA	False	NA	NA	NA	67243986	67265917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.73	chr6	+	1602	8	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2753.26296956753	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCAGTTTAAAGCTTTC	5864	False	NA	26	True	AATATA	-14	NA	67243986	67261284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248325_67248870_67249012_67249126_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.74	chr6	+	4753	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	20	-3106	-2	3101	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTGGCTTGTGTTTG	5864	False	NA	NA	False	ATTAAA	-33	NA	67243986	67264396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.75	chr6	+	2592	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	379	12503	-2	922	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTTTTCTAGGATATT	5864	False	NA	NA	False	ATTAAA	-28	NA	67243986	67262217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.76	chr6	+	1584	9	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2196.24399543858	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTTTCACTTCATT	5865	False	NA	34	True	AATATA	-22	NA	67243987	67261292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886_67261131_67261167
ES.28681.77	chr6	+	5151	7	NIC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	-1	2	intron_retention	FALSE	canonical	3	2743	junction_2	1496.01141001293	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5865	False	NA	40	True	NA	NA	NA	67243987	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.78	chr6	+	5401	7	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	3189	junction_2	1374.65435049446	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCAGTTTAAAGCTTTC	5865	False	NA	26	True	AATATA	-14	NA	67243987	67261284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.79	chr6	+	4452	8	NNC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	1	2810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2459.82674850345	2664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCATTAAATCCTGCTA	5867	False	NA	NA	False	AATAAA	-16	NA	67243989	67264105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254751_67254923_67258631_67258806_67260886
ES.28681.8	chr6	+	2121	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	249	13104	-110	321	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCATGGTTTATTAGGTT	5734	False	NA	13	True	AAAACA	-22	NA	67243856	67261616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.80	chr6	+	4028	9	NNC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	2	2524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2382.90219257421	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAGACTGAGCAGCCT	5868	False	NA	19	True	ATTAAA	-34	NA	67243990	67263819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244198_67244341_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.81	chr6	+	2401	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-3	-781	-2	781	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTATGATTTGGTAT	5869	False	NA	27	True	CATAAA	-31	NA	67243991	67262076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.83	chr6	+	1805	9	NNC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	-2	316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2382.90219257421	2592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCATGCATGGTTTATT	5869	False	NA	8	True	AAAACA	-17	NA	67243991	67261611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244199_67244356_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.84	chr6	+	1408	8	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2306.92194431083	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCTTTCACTTCATTT	5869	False	NA	35	True	AATATA	-23	NA	67243991	67261293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244202_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.85	chr6	+	1720	7	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	3728	junction_3	1002.47367657322	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCAGTTTAAAGCTTTC	5869	False	NA	26	True	AATATA	-14	NA	67243991	67261284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.87	chr6	+	5426	7	NIC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	2187	junction_3	1833.3177272063	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTTTAAAGCTTTCAC	5869	False	NA	28	True	AATATA	-16	NA	67243991	67261286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.88	chr6	+	1466	7	NIC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	3728	junction_3	1002.47367657322	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5870	False	NA	19	True	NA	NA	NA	67243992	67261031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.89	chr6	+	2236	7	NIC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2743	junction_3	1358.0740038746	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5870	False	NA	37	True	AATATA	-25	NA	67243992	67261295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.9	chr6	+	1506	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	-77	238	-77	2	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5767	False	NA	40	True	NA	NA	NA	67243889	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.90	chr6	+	4184	8	NNC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	-1	2809	at_least_one_novel_splicesite	FALSE	canonical	2	344	junction_1	2211.83766057428	2664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCATTAAATCCTGCT	5870	False	NA	NA	False	AATAAA	-15	NA	67243992	67264104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.91	chr6	+	2100	6	NIC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5781	junction_4	317.012050244151	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5871	False	NA	19	True	NA	NA	NA	67243993	67261031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_67244394_67248181_67248333_67248870_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.92	chr6	+	1246	9	NNC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2690.18298634126	2553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTCATTCATACCATT	5871	False	NA	40	True	NA	NA	NA	67243993	67261052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67246322_67246393_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.93	chr6	+	7304	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	-1	-5686	0	5686	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTCATTTCTTTAC	5871	False	NA	NA	False	GATAAA	-16	NA	67243993	67266981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.94	chr6	+	3556	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	-1	-2389	0	2125	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGTAAGTATTTTGT	5871	False	NA	22	True	AATAGA	-27	NA	67243993	67263420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.95	chr6	+	4128	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	0	-2792	0	2528	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTGAGCAGCCTTAGT	5871	False	NA	23	True	ATTAAA	-38	NA	67243993	67263823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.96	chr6	+	1430	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	-1	-263	0	-1	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	5871	False	NA	36	True	AATATA	-24	NA	67243993	67261294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.98	chr6	+	2603	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	-986	0	986	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	2620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTAAAGACTAGTCGTC	5872	False	NA	NA	False	ATTAAA	-22	NA	67243994	67262281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28681.99	chr6	+	1004	5	NNC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2721.49640593185	2577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAAGCTTTCACTTCA	5872	False	NA	32	True	AATATA	-20	NA	67243994	67261290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_67244168_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ES.28682.1	chr6	-	176	1	Intergenic	novelGene_23857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATAAG	7784	False	NA	NA	False	NA	NA	NA	67230123	67229947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67229900_67230100
ES.28683.1	chr6	-	377	1	Intergenic	novelGene_23858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67238084	67237707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67237700_67238100
ES.28683.2	chr6	-	5864	1	Antisense	novelGene_ENSMUSG00000036371.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAAATAAGCTTATAA	NA	False	NA	NA	False	NA	NA	NA	67243752	67237888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_67237900_67243800
ES.28683.3	chr6	-	3096	1	Antisense	novelGene_ENSMUSG00000036371.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	TTTAAA	-29	NA	67243752	67240656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_67240700_67243800
ES.28684.1	chr6	-	4779	1	Antisense	novelGene_ENSMUSG00000036371.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACTTAAAAGT	7464	False	NA	NA	False	NA	NA	NA	67259947	67255168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_67255200_67259900
ES.28685.1	chr6	-	2551	10	NNC	ENSMUSG00000018341.13	novel	2600	10	NA	NA	22189	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAAGGCCTCTTCCATA	NA	False	NA	NA	False	ATTAAA	-15	NA	67294489	67268302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_67268914_67268965_67269721_67272195_67272296_67275132_67275224_67275891_67276030_67280443_67280603_67280682_67280782_67285941_67286143_67293174_67293392_67294309
ES.28686.1	chr6	+	198	1	Intergenic	novelGene_23859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	67335070	67335268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_67335100_67335300
ES.28687.1	chr6	-	111	1	FSM	ENSMUSG00000107508.2	ENSMUST00000203114.2	337	1	273	-47	273	47	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAATGGAAGAAAG	NA	False	NA	NA	False	AATAAA	-22	NA	67394762	67394651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_67394700_67394800
ES.28688.1	chr6	-	1877	1	FSM	ENSMUSG00000051397.6	ENSMUST00000058178.6	1735	1	-148	6	-148	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCATTTTATTGTTCTC	NA	False	NA	NA	False	AAAAAG	-30	NA	67512928	67511051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_67511100_67512900
ES.28689.1	chr6	-	172	1	Intergenic	novelGene_23860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	67900904	67900732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67900700_67900900
ES.2869.1	chr10	-	5270	1	Intergenic	novelGene_2197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGATGAATCTACAGAAAA	8280	False	NA	NA	False	NA	NA	NA	60688208	60682938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60682900_60688200
ES.28690.1	chr6	-	157	1	Intergenic	novelGene_23861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	67902503	67902346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_67902300_67902500
ES.28691.1	chr6	-	1075	5	NNC	ENSMUSG00000076533.4	novel	352	2	NA	NA	-10875	292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTTGCTAAACACTATA	NA	False	NA	NA	False	AATAAA	-26	NA	68795567	68783870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_68784466_68785801_68785924_68786011_68786203_68789817_68789891_68795473
ES.28692.1	chr6	-	2627	1	Intergenic	novelGene_23862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTATCCATACGTTCT	NA	False	NA	NA	False	NA	NA	NA	69069656	69067029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_69067000_69069700
ES.28693.1	chr6	-	176	1	Intergenic	novelGene_23863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAATTAATAT	NA	False	NA	NA	False	NA	NA	NA	69545811	69545635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_69545600_69545800
ES.28694.1	chr6	+	1757	1	Intergenic	novelGene_23864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	69884427	69886184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_69884400_69886200
ES.28695.1	chr6	+	4077	1	Intergenic	novelGene_23865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAAAATTCCAACTCAAT	NA	False	NA	NA	False	NA	NA	NA	70065269	70069346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_70065300_70069300
ES.28696.1	chr6	-	3705	2	FSM	ENSMUSG00000053604.6	ENSMUST00000129244.2	3644	2	-35	-26	-35	26	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAAAGATTT	8199	False	NA	NA	False	NA	NA	NA	70769022	70759037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_70762590_70768869
ES.28697.1	chr6	-	174	1	Intergenic	novelGene_23866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGAGAAAATGCGC	NA	False	NA	NA	False	NA	NA	NA	70814943	70814769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_70814800_70814900
ES.28698.1	chr6	+	4575	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	-64	2	-64	-2	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTGACTCTTATTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	70821434	70882227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28698.10	chr6	+	174	1	Intergenic	novelGene_23868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTCATAGC	4731	False	NA	NA	False	NA	NA	NA	70829450	70829624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_70829400_70829600
ES.28698.11	chr6	+	170	1	Intergenic	novelGene_23869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATATTTAAAAGAA	5125	False	NA	NA	False	NA	NA	NA	70854588	70854758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_70854600_70854800
ES.28698.12	chr6	+	1573	3	NIC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	36.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70873748	70882223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_70874068_70877215_70877318_70881071
ES.28698.2	chr6	+	4396	17	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.8322155826127	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70821487	70882223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858589_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28698.3	chr6	+	5059	16	NIC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	52	junction_7	9.6999427260623	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTAATAGTTGACTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	70821490	70882221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28698.4	chr6	+	4519	18	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	10	24309	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	18.3210507246167	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGTTTATTATGTGAT	NA	False	NA	NA	False	NA	NA	NA	70821508	70906538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071_70882217_70906509
ES.28698.5	chr6	+	4556	18	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.2783666295807	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70821509	70882223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855624_70855685_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28698.7	chr6	+	4449	17	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	17.7939596492742	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70821512	70882223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858511_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28698.9	chr6	+	5760	15	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	242	-6	intron_retention	FALSE	canonical	2	5	junction_4	18.9075354808389	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGTTGACTCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	70821781	70882223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858511_70859412_70860578_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ES.28699.1	chr6	-	181	1	Intergenic	novelGene_23867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAGAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	70828850	70828669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_70828700_70828800
ES.287.1	chr1	+	174	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACCAC	NA	False	NA	NA	False	NA	NA	NA	36663453	36663627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36663500_36663600
ES.2870.1	chr10	-	182	1	Intergenic	novelGene_2198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGAACTTTGTAAG	5618	False	NA	NA	False	NA	NA	NA	60710681	60710499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60710500_60710700
ES.28700.1	chr6	-	1044	1	Intergenic	novelGene_23870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGACTGCAGATCCCTG	NA	False	NA	NA	False	AAGAAA	-14	NA	70876169	70875125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_70875100_70876200
ES.28701.1	chr6	+	180	1	Intergenic	novelGene_23871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCTTTTCTATACC	NA	False	NA	NA	False	NA	NA	NA	70927430	70927610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_70927400_70927600
ES.28702.1	chr6	+	180	1	Intergenic	novelGene_23872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGGACAAACAAAC	1860	False	NA	NA	False	NA	NA	NA	70967789	70967969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_70967800_70968000
ES.28703.1	chr6	-	172	1	Intergenic	novelGene_23873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	70982817	70982645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_70982600_70982800
ES.28704.1	chr6	+	155	1	Intergenic	novelGene_23874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	71021825	71021980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71021800_71022000
ES.28705.1	chr6	+	177	1	Intergenic	novelGene_23875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	71072905	71073082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71072900_71073100
ES.28706.1	chr6	+	479	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-33	-92	-33	92	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCCAGAACAATGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71101560	71102039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71101600_71102000
ES.28707.1	chr6	-	1793	9	FSM	ENSMUSG00000054474.16	ENSMUST00000160918.8	2077	9	50	234	-42	-2	multi-exon	TRUE	canonical	1	2	junction_8	2.47171499166065	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGGGTGTTTTGTTTTG	NA	False	NA	-2	True	NA	NA	NA	71121373	71105383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203_71118439_71121274
ES.28708.1	chr6	+	3328	1	FSM	ENSMUSG00000098623.3	ENSMUST00000184382.3	131	1	-85	-3112	-85	3112	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAGTACCAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	71248569	71251897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71248600_71251900
ES.28708.2	chr6	+	3273	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	-84	-1502	-84	1502	multi-exon	FALSE	canonical	3	170	junction_2	14.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTCTGCCTTCACAGT	NA	False	NA	NA	False	AATAAA	-17	NA	71248576	71263805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71248825_71259134_71259302_71260947
ES.28708.3	chr6	+	1769	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	-83	1	-83	0	multi-exon	FALSE	canonical	3	170	junction_2	14.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	False	NA	5	True	AATAAA	-17	NA	71248577	71262302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71248825_71259134_71259302_71260947
ES.28708.4	chr6	+	1352	4	NNC	ENSMUSG00000053012.18	novel	1687	3	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.7762306474063	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTCTTTGTGTCAG	NA	False	NA	2	True	AATAAA	-14	NA	71248674	71262299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71248825_71259134_71259302_71260947_71261606_71261922
ES.28708.5	chr6	+	1482	2	FSM	ENSMUSG00000053012.18	ENSMUST00000205123.2	417	2	12	-1077	12	-1	multi-exon	FALSE	canonical	3	6	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCTTTGTGTCAGTG	NA	False	NA	4	True	AATAAA	-16	NA	71248696	71262301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71248825_71260947
ES.28708.6	chr6	+	1589	3	NNC	ENSMUSG00000053012.18	novel	1687	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	False	NA	5	True	AATAAA	-17	NA	71248700	71262302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71248825_71259191_71259302_71260947
ES.28708.7	chr6	+	3079	2	Fusion	ENSMUSG00000098623.3_ENSMUSG00000053012.18	novel	1749	4	NA	NA	24	3112	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAGTACCAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	71248708	71251897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_71248744_71248853
ES.28708.8	chr6	+	5798	2	Fusion	ENSMUSG00000107749.2_ENSMUSG00000053012.18	novel	1393	2	NA	NA	2082	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	6	True	AATAAA	-18	NA	71255559	71262303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_71256989_71257934
ES.28708.9	chr6	+	4598	3	Fusion	ENSMUSG00000107749.2_ENSMUSG00000053012.18	novel	1393	2	NA	NA	2467	0	multi-exon	FALSE	non_canonical	0	0	junction_1	85	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	False	NA	6	True	AATAAA	-18	NA	71255944	71262303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_71257822_71257936_71259302_71260947
ES.28709.1	chr6	+	2919	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	-44	-1	-44	1	multi-exon	FALSE	canonical	3	49	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTGATGTGATTT	NA	False	NA	12	True	NA	NA	NA	71270704	71279865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71270843_71277084
ES.2871.1	chr10	-	159	1	Intergenic	novelGene_2199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	9742	False	NA	NA	False	NA	NA	NA	60728454	60728295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60728300_60728500
ES.28710.1	chr6	-	3370	10	FSM	ENSMUSG00000055027.18	ENSMUST00000074301.10	3361	10	-8	-1	-8	1	multi-exon	FALSE	canonical	0	0	junction_5	2.18298696715428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGATTCTTTTCTGA	NA	False	NA	NA	False	AATAAA	-22	NA	71239273	71190922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71192894_71193711_71193881_71196241_71196406_71197911_71198005_71202315_71202506_71212326_71212366_71214340_71214472_71215531_71215746_71216533_71216711_71239051
ES.28710.2	chr6	-	3300	11	NNC	ENSMUSG00000055027.18	novel	2064	10	NA	NA	-635	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.14709105535839	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTGTGATTCTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	71299852	71190925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71192894_71193711_71193881_71196241_71196406_71197911_71198005_71202315_71202506_71212326_71212366_71214340_71214472_71215531_71215746_71216533_71216711_71298898_71298992_71299790
ES.28711.1	chr6	+	796	1	Intergenic	novelGene_23876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2462	False	NA	NA	False	NA	NA	NA	71379771	71380567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71379800_71380600
ES.28711.2	chr6	+	188	1	Intergenic	novelGene_23877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAGTGGTGGTGCA	2932	False	NA	NA	False	NA	NA	NA	71380241	71380429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71380200_71380400
ES.28712.1	chr6	+	4914	1	Intergenic	novelGene_23878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGTAAAAAAAAAAAAAG	6349	False	NA	NA	False	AATATA	-22	NA	71383658	71388572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71383700_71388600
ES.28712.2	chr6	+	179	1	Intergenic	novelGene_23879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	71387774	71387953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71387800_71388000
ES.28713.1	chr6	-	5070	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	-34	-4	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGGATCCAGTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	71417655	71365621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.10	chr6	-	5680	9	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	105	-5	intron_retention	FALSE	canonical	0	0	junction_8	70.6911194917721	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417516	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71417356
ES.28713.11	chr6	-	5000	11	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	133	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.8126718860789	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417488	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71386857_71386956_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.12	chr6	-	4876	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	139	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.2405254088299	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417482	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71368962_71370086_71370173_71371628_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.14	chr6	-	6434	9	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	0	-12	intron_retention	FALSE	canonical	3	72	junction_1	49.6405831956072	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAACTGTTTTTGTGGA	NA	False	NA	-12	True	ATTAAA	-13	NA	71417621	71365629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.15	chr6	-	4954	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	-157	10	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGCTTATTTGATTT	NA	False	NA	NA	False	AATAAA	-37	NA	71417778	71365860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.16	chr6	-	5947	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	-30	248	-30	5	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATACTCTCTGCTTATTT	NA	False	NA	NA	False	AATAAA	-32	NA	71417651	71365865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.17	chr6	-	5560	7	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	120	4	intron_retention	FALSE	canonical	0	0	junction_5	82.4029732473289	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATACTCTCTGCTTATT	NA	False	NA	NA	False	AATAAA	-31	NA	71417501	71365866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71406001_71406145_71416981
ES.28713.18	chr6	-	6085	9	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	137	3	intron_retention	FALSE	non_canonical	0	0	junction_1	73.0709201734863	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATACTCTCTGCTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	71417484	71365867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71368960_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71391904_71406001_71406145_71416981
ES.28713.2	chr6	-	6196	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	-35	4	-35	-4	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGGATCCAGTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	71417656	71365621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.20	chr6	-	4681	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	172	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	86.7249092045833	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGATACTCTCTGCTTA	NA	False	NA	NA	False	AATAAA	-29	NA	71417449	71365868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71369034_71370086_71370173_71371608_71371764_71373835_71373931_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.21	chr6	-	4280	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	89.6579232966978	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGATACTCTCTGCT	NA	False	NA	NA	False	AATAAA	-27	NA	71417531	71365870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71417161_71417296_71417389
ES.28713.22	chr6	-	5395	6	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	81	0	intron_retention	FALSE	canonical	0	0	junction_2	80.5918109983887	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGATACTCTCTGCT	NA	False	NA	NA	False	AATAAA	-27	NA	71417540	71365870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71370173_71371608_71371764_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.25	chr6	-	4853	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	68.0203310202087	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATCAGACTGATACTC	NA	False	NA	NA	False	AATAAA	-21	NA	71417621	71365876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71369034_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.26	chr6	-	4498	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	-22	111	intron_retention	FALSE	canonical	0	0	junction_3	87.3232960022202	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCCTCTTTATTTTTA	NA	False	NA	NA	False	CATAAA	-11	NA	71417643	71367339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71370173_71371608_71371764_71373835_71373939_71374251_71374285_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.27	chr6	-	4603	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	-161	1723	-161	110	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGCCTCTTTATTTTT	NA	False	NA	NA	False	CATAAA	-10	NA	71417782	71367340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.28	chr6	-	4338	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	0	1827	0	6	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGGTTGTTGTTGATCT	NA	False	NA	NA	False	AATAAA	-40	NA	71417621	71367444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.29	chr6	-	3248	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	-35	6	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGGTTGTTGTTGATCT	NA	False	NA	NA	False	AATAAA	-40	NA	71417656	71367444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.3	chr6	-	4987	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	120	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	68.0203310202087	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417501	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71369034_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.30	chr6	-	3742	8	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	107	-1022	intron_retention	FALSE	canonical	3	172	junction_3	26.1744539736042	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAATTTGATGTATGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	71417514	71369339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71370173_71371608_71371764_71373835_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.32	chr6	-	2358	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	77	3730	77	-1030	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGTGTTACTAATTTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	71417544	71369347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.33	chr6	-	2074	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	123	3968	123	-1268	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGCATAGCTTTTC	NA	False	NA	NA	False	GATAAA	-3	NA	71417498	71369585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28713.34	chr6	-	6453	2	ISM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	199	34515	199	-28689	5prime_fragment	FALSE	canonical	3	232	junction_1	0	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTTAGCTTACAGCGAC	NA	False	NA	NA	False	ATTAAA	-4	NA	71417422	71400132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71406145_71416981
ES.28713.6	chr6	-	6680	6	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	-15523	-5	intron_retention	FALSE	canonical	3	172	junction_3	27.1042432102429	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	7543	False	NA	-5	True	ATTAAA	-20	NA	71391800	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71370173_71371608_71371764_71373835_71375511_71376110_71376278_71390233_71390335_71391768
ES.28713.7	chr6	-	5907	10	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	123	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	68.9026867902376	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417498	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981_71417235_71417364
ES.28713.9	chr6	-	5505	9	NNC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	540	-5	intron_retention	FALSE	canonical	0	0	junction_3	92.4618164433297	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTTGTGGATCCAGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	71417081	71365622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71370173_71371608_71371764_71373835_71373939_71375551_71375603_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ES.28714.1	chr6	+	3312	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	-49	1	-49	-1	multi-exon	FALSE	canonical	3	15	junction_3	2.16024689946929	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTAGGTTTCTGAT	NA	False	NA	4	True	AATAAA	-15	NA	71470828	71487864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
ES.28714.2	chr6	+	3459	5	NNC	ENSMUSG00000052656.13	novel	2671	5	NA	NA	-30	-4	intron_retention	FALSE	canonical	0	0	junction_2	8.92678553567856	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGGTTGTAGGTTTCT	NA	False	NA	1	True	AATAAA	-12	NA	71470847	71487861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71471873_71473814_71473955_71475134_71475304_71482717_71482834_71485852
ES.28714.3	chr6	+	3186	5	NNC	ENSMUSG00000052656.13	novel	2671	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.59522876548166	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTTGTAGGTTTCTGA	NA	False	NA	3	True	AATAAA	-14	NA	71470895	71487863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71471128_71471185_71471873_71473814_71473955_71482717_71482834_71485852
ES.28714.4	chr6	+	3348	5	NNC	ENSMUSG00000052656.13	novel	2671	5	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_2	8.92678553567856	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTAGGTTTCTGAT	NA	False	NA	4	True	AATAAA	-15	NA	71470897	71487864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71471873_71473814_71473955_71476395_71476501_71482717_71482834_71485852
ES.28714.5	chr6	+	175	1	Intergenic	novelGene_23880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	71484566	71484741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71484600_71484700
ES.28715.1	chr6	+	2544	6	NIC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	2	22	junction_1	142.727712796079	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATATTATGCCTTT	NA	False	NA	22	True	NA	NA	NA	71520823	71558562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71520952_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.10	chr6	+	1079	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	9	338	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTAGCTCTTGGTCTCAT	NA	False	NA	-3	True	AATAAA	-6	NA	71521345	71557141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.11	chr6	+	3020	1	Intergenic	novelGene_23881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AAGAAA	-27	NA	71530197	71533217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71530200_71533200
ES.28715.12	chr6	+	4044	2	FSM	ENSMUSG00000053119.12	ENSMUST00000128382.2	436	2	-3257	-351	-3257	351	multi-exon	FALSE	canonical	3	336	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCATTGTAAATGTCACA	6079	False	NA	10	True	AATAAA	-19	NA	71551315	71557154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71554830_71556624
ES.28715.2	chr6	+	1192	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	62	1400	7	360	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTCACATGCAATGAA	NA	False	NA	19	True	AATAAA	-28	NA	71520842	71557163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.3	chr6	+	2598	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	62	-6	7	6	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCCTTTGGTGTTT	NA	False	NA	29	True	NA	NA	NA	71520842	71558569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.4	chr6	+	2687	7	NIC	ENSMUSG00000053119.12	novel	998	7	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	177.389167275419	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTGTATATTATGCC	NA	False	NA	19	True	NA	NA	NA	71520897	71558559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71521018_71529382_71529444_71535958_71536113_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.5	chr6	+	3562	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	118	-1026	-2	-4	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCATTTGTTTGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	71520898	71559589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.7	chr6	+	3599	5	NNC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	19	3644	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	209.300471810266	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71520931	71541599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71521018_71529382_71529444_71537880_71540357_71540394_71540882_71541110
ES.28715.8	chr6	+	2416	5	NIC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	40	-5	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	153.936675292147	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTTGTATATTATGC	NA	False	NA	18	True	NA	NA	NA	71520952	71558558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28715.9	chr6	+	2511	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATATTATGCCTTT	NA	False	NA	22	True	NA	NA	NA	71521334	71558562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ES.28716.1	chr6	-	197	1	Intergenic	novelGene_23882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71541103	71540906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_71540900_71541100
ES.28717.1	chr6	-	5855	1	Antisense	novelGene_ENSMUSG00000053119.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71565092	71559237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_71559200_71565100
ES.28718.1	chr6	+	3513	1	Antisense	novelGene_ENSMUSG00000053470.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTTCTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	71568190	71571703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_71568200_71571700
ES.28719.1	chr6	+	5009	1	Antisense	novelGene_ENSMUSG00000053470.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGCCAAAAAGGGATTC	NA	False	NA	NA	False	TATAAA	-37	NA	71577683	71582692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_71577700_71582700
ES.28719.2	chr6	+	220	1	Intergenic	novelGene_23884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATATGCAGAACATCGT	NA	False	NA	NA	False	NA	NA	NA	71582309	71582529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71582300_71582500
ES.2872.1	chr10	+	152	1	Intergenic	novelGene_2200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAGATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	60871466	60871618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60871500_60871600
ES.28720.1	chr6	+	4006	1	Antisense	novelGene_ENSMUSG00000053470.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71599396	71603402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_71599400_71603400
ES.28721.1	chr6	-	4958	28	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	0	4	combination_of_known_junctions	TRUE	canonical	3	43	junction_18	130.557000254681	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCATTTCTTAGTGACT	NA	False	NA	0	True	AATAAA	-22	NA	71609974	71565951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.10	chr6	-	6873	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	25	3	intron_retention	FALSE	canonical	3	43	junction_16	130.781442108581	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTTTGTCCTTTATT	NA	False	NA	-14	True	ATTAAA	-22	NA	71609949	71566017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.100	chr6	-	1557	9	ISM	ENSMUSG00000053470.14	ENSMUST00000205289.2	2723	16	423	12163	423	257	internal_fragment	FALSE	canonical	3	176	junction_2	29.9350860195858	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGGTAAATGATATGT	NA	False	NA	NA	False	AATAAA	-27	NA	71609247	71588472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039
ES.28721.101	chr6	-	880	5	ISM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-61	35436	24	-12662	5prime_fragment	FALSE	canonical	3	209	junction_4	21.9772609758359	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATTGATGATGTGTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	71609950	71601391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.13	chr6	-	5072	27	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	43	junction_18	131.939766829436	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71609925	71566021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.15	chr6	-	4435	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-395	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	138.050484934072	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71610369	71566021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588842_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71610262
ES.28721.16	chr6	-	3981	7	ISM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	35564	64	40	-1	intron_retention	FALSE	canonical	3	381	junction_6	51.4049824649539	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71574106	71566021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506
ES.28721.18	chr6	-	7896	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-362	-1	intron_retention	FALSE	canonical	2	4	junction_26	134.444204348273	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71610336	71566021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71610262
ES.28721.19	chr6	-	4822	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	10	junction_14	142.511506903829	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGCTGTTCTTTGTCCTT	NA	False	NA	-18	True	ATTAAA	-18	NA	71609893	71566021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.20	chr6	-	4617	26	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	125.651683633766	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCGCTGTTCTTTGTCCT	NA	False	NA	-19	True	ATTAAA	-17	NA	71609640	71566022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588629_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ES.28721.21	chr6	-	7924	18	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	3199	-3	intron_retention	FALSE	canonical	1	20	junction_4	124.402989538951	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCGCTGTTCTTTGTCC	NA	False	NA	-20	True	ATTAAA	-16	NA	71595182	71566023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568976_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815
ES.28721.22	chr6	-	9356	8	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	-570	-3	intron_retention	FALSE	canonical	3	379	junction_5	48.2129629448177	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCGCTGTTCTTTGTCC	NA	False	NA	-20	True	ATTAAA	-16	NA	71578709	71566023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71570990_71571506_71576497_71576997_71577126_71577475_71577572_71577706
ES.28721.27	chr6	-	6328	15	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	47	-4	intron_retention	FALSE	canonical	3	172	junction_14	83.2409828419259	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71586076	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71581133_71584385_71584591_71585988
ES.28721.29	chr6	-	4357	27	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	10	junction_16	124.809796118336	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609893	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.3	chr6	-	4834	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-23	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	127.39339434632	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATCATTTCTTAGTGAC	NA	False	NA	-1	True	AATAAA	-21	NA	71609912	71565952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601680_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.30	chr6	-	4587	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	141.142867944497	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609902	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602883_71609189_71609256_71609480_71609564_71609828
ES.28721.31	chr6	-	3433	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	88	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	126.611857659542	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71586035	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580578_71581133_71584385_71584591_71585988
ES.28721.32	chr6	-	4906	28	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_19	136.363892255652	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609903	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71591374_71591520_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.34	chr6	-	4630	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	30	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	126.175750443578	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609944	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.35	chr6	-	4723	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	39	-4	intron_retention	FALSE	canonical	3	10	junction_15	127.281005652847	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609935	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.37	chr6	-	5229	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-13	-4	intron_retention	FALSE	canonical	2	5	junction_18	138.93724371927	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCGCTGTTCTTTGTC	NA	False	NA	-21	True	ATTAAA	-15	NA	71609902	71566024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71591374_71591520_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.38	chr6	-	4837	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	176	junction_17	111.979683871674	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	False	NA	-22	True	ATTAAA	-14	NA	71609902	71566025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.39	chr6	-	4718	26	FSM	ENSMUSG00000053470.14	ENSMUST00000207023.2	4753	26	30	5	30	-5	multi-exon	FALSE	canonical	1	3	junction_25	126.668929102602	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	False	NA	-22	True	ATTAAA	-14	NA	71609944	71566025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609821
ES.28721.4	chr6	-	3354	17	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATAATCATTTCTTAGT	NA	False	NA	-4	True	AATAAA	-18	NA	71586226	71565955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
ES.28721.40	chr6	-	4780	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	140.122769500693	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	False	NA	-22	True	ATTAAA	-14	NA	71609915	71566025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577128_71577475_71577572_71577706_71577860_71580911_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.41	chr6	-	3982	16	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	64	-5	intron_retention	FALSE	canonical	3	172	junction_15	80.5289733919138	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	False	NA	-22	True	ATTAAA	-14	NA	71586059	71566025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
ES.28721.45	chr6	-	4797	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-29	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	127.154945548786	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71609918	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597218_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.46	chr6	-	4995	29	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_19	143.711636406992	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71609941	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71591374_71591520_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.47	chr6	-	5937	18	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	-4601	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_16	117.886315537485	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71593589	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815
ES.28721.48	chr6	-	4396	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-401	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	138.226108606846	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71610375	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71610262
ES.28721.49	chr6	-	3100	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	1184	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	114.126009716234	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71584939	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71584884
ES.28721.5	chr6	-	4538	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	124.610398760657	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGATAATCATTTCTTAG	NA	False	NA	-5	True	AATAAA	-17	NA	71609966	71565956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588842_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.50	chr6	-	5355	15	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	76	-6	intron_retention	FALSE	canonical	3	172	junction_14	80.0727029336592	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71586047	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
ES.28721.51	chr6	-	3413	16	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	1007	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	117.622484623004	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71585116	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71581075_71581133_71584385
ES.28721.52	chr6	-	5557	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-36	-6	intron_retention	FALSE	canonical	3	176	junction_18	110.620822632993	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71609925	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.54	chr6	-	4749	12	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	-1385	-6	intron_retention	FALSE	canonical	3	379	junction_10	48.7271031204647	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71579524	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475
ES.28721.58	chr6	-	4805	28	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	106	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.244876240348	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTCGCTGTTCTTTG	NA	False	NA	-23	True	ATTAAA	-13	NA	71609564	71566026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71591374_71591449_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ES.28721.6	chr6	-	5082	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-268	2	-183	0	multi-exon	FALSE	canonical	3	176	junction_18	110.285703472991	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGATAATCATTTCTTA	NA	False	NA	-6	True	AATAAA	-16	NA	71610157	71565957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.61	chr6	-	4632	26	NNC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	126.986953660602	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609877	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609837
ES.28721.64	chr6	-	5133	27	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	43	junction_17	133.027764375241	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609902	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.65	chr6	-	4578	27	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	82	-8	combination_of_known_junctions	FALSE	canonical	3	10	junction_16	142.840297506397	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609807	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ES.28721.66	chr6	-	2841	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	1678	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	114.126009716234	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71584445	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577037_71577093_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385
ES.28721.68	chr6	-	7525	11	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	589	-8	intron_retention	FALSE	canonical	3	379	junction_9	47.6344413213801	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71580375	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71576497_71576997_71577126_71577475
ES.28721.7	chr6	-	3526	16	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	46	-1	intron_retention	FALSE	canonical	3	172	junction_15	78.0330414347381	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAGATAATCATTTCTT	NA	False	NA	-7	True	AATAAA	-15	NA	71586077	71565958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
ES.28721.70	chr6	-	6842	28	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	144.217171628737	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609902	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71591374_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.72	chr6	-	3131	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	76	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	126.611857659542	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71586047	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580888_71581133_71584385_71584591_71585988
ES.28721.75	chr6	-	5231	15	NIC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	1027	-8	intron_retention	FALSE	canonical	3	336	junction_8	46.2716579185424	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71585096	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385
ES.28721.76	chr6	-	3458	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	197	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	149.410495259704	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71585926	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577855_71580917_71581133_71584385_71584591_71585506
ES.28721.77	chr6	-	3126	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	1222	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	114.126009716234	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71584901	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71584818
ES.28721.8	chr6	-	5157	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	176	junction_17	112.464038696821	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAGATAATCATTTCTT	NA	False	NA	-7	True	AATAAA	-15	NA	71609909	71565958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.81	chr6	-	7095	24	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	141	-8	intron_retention	FALSE	canonical	1	2	junction_5	143.445793427949	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609529	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569387_71570858_71570990_71571506_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ES.28721.83	chr6	-	5183	27	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-37	-8	intron_retention	FALSE	canonical	3	43	junction_17	132.069984361439	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71609926	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.84	chr6	-	985	1	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	1903	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	548	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTGTCGCTGTTCTT	NA	False	NA	-25	True	ATTAAA	-11	NA	71567013	71566028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71566000_71567000
ES.28721.86	chr6	-	4762	28	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-409	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_27	142.610446212746	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTTGTCGCTGTTC	NA	False	NA	-27	True	ATTAAA	-9	NA	71610383	71566030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71610347
ES.28721.88	chr6	-	2908	16	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	985	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	151.861193931242	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTTGTCGCTGTTC	NA	False	NA	-27	True	ATTAAA	-9	NA	71585138	71566030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71580917_71581133_71584385_71584591_71585118
ES.28721.89	chr6	-	3073	17	NNC	ENSMUSG00000053470.14	novel	4853	26	NA	NA	972	-11	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_16	111.92657679814	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATATTTTGTCGCTGTT	NA	False	NA	-28	True	ATTAAA	-8	NA	71585151	71566031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585118
ES.28721.91	chr6	-	4773	28	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	31	-42	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_14	141.858804587369	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTAAGCATTTTGCAT	NA	False	NA	-59	True	AATGAA	-15	NA	71609943	71566062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580960_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.92	chr6	-	3270	13	ISM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-2	13814	-2	-43	5prime_fragment	FALSE	canonical	3	176	junction_4	67.568278224491	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGAAATATATGTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	71609891	71579769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.93	chr6	-	1622	3	ISM	ENSMUSG00000053470.14	ENSMUST00000205470.2	1718	11	75	8183	75	-49	5prime_fragment	FALSE	canonical	3	172	junction_2	138	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCACAATAGAAATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	71586048	71579775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71581133_71584385_71584591_71585988
ES.28721.94	chr6	-	2923	13	ISM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	-13	14172	-13	-12	5prime_fragment	FALSE	canonical	3	176	junction_4	67.568278224491	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTTCGATAAATGT	NA	False	NA	NA	False	AATAAA	-23	NA	71609902	71580127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.95	chr6	-	1308	3	ISM	ENSMUSG00000053470.14	ENSMUST00000205470.2	1718	11	37	8535	37	-12	5prime_fragment	FALSE	canonical	3	172	junction_2	138	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTTCGATAAATGT	NA	False	NA	NA	False	AATAAA	-23	NA	71586086	71580127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71581133_71584385_71584591_71585988
ES.28721.96	chr6	-	172	1	Intergenic	novelGene_23883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	505	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATATTCAAAACTA	NA	False	NA	NA	False	NA	NA	NA	71582059	71581887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_71581900_71582100
ES.28721.97	chr6	-	7360	3	NNC	ENSMUSG00000053470.14	novel	828	7	NA	NA	1605	1990	intron_retention	FALSE	canonical	3	4	junction_2	3.5	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	71596776	71586739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71590980_71591374_71591520_71593801
ES.28721.98	chr6	-	3523	12	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-21	1990	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	74.9501211550523	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	71609910	71586739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28721.99	chr6	-	1860	12	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	-37	311	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	74.9501211550523	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCCCCTGCGGGCTG	NA	False	NA	NA	False	GATAAA	-18	NA	71609926	71588418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ES.28722.1	chr6	+	3698	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	226	0	-83	0	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTAATGTTGGGCTAAT	1501	False	NA	NA	False	AATAAA	-27	NA	71684770	71787694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
ES.28722.2	chr6	+	3772	6	ISM	ENSMUSG00000052852.9	ENSMUST00000212792.2	3339	9	-18	11863	-18	-9927	5prime_fragment	FALSE	canonical	3	27	junction_1	3.79473319220206	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAGAAGA	1566	False	NA	NA	False	NA	NA	NA	71684835	71775367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130
ES.28722.3	chr6	+	2868	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	300	756	-9	-292	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTAACTCCTTTTCCTT	1575	False	NA	NA	False	TATAAA	-26	NA	71684844	71786938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
ES.28722.4	chr6	+	1072	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	312	2540	3	-140	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCTGAGATGTACAT	1587	False	NA	NA	False	NA	NA	NA	71684856	71785154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
ES.28723.1	chr6	-	5628	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	41	-1948	-6	1948	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAACTTGTCTGGAATA	NA	False	NA	NA	False	ATTAAA	-20	NA	71800753	71788032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.10	chr6	-	901	4	NNC	ENSMUSG00000052962.4	novel	3721	4	NA	NA	35	220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	682.894005115159	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAAAGTTAAATTTATT	NA	False	NA	-33	True	ATTAAA	-22	NA	71800712	71792926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71793272_71794588_71794734_71795652_71795843_71800491
ES.28723.2	chr6	-	3616	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	23	82	23	-82	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTGACTTTGCTC	NA	False	NA	NA	False	AGTAAA	-20	NA	71800771	71790062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.3	chr6	-	3482	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	27	212	-20	-212	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCCCTGTCTAACTCTT	NA	False	NA	NA	False	AATAAA	-29	NA	71800767	71790192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.5	chr6	-	1586	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	24	2111	-23	1055	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTCTACTTTACTTT	NA	False	NA	-1	True	AATAAA	-16	NA	71800770	71792091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.6	chr6	-	971	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	33	2717	-14	449	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCACTGTCTCCTACCTG	NA	False	NA	-4	True	AATAAA	-21	NA	71800761	71792697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.7	chr6	-	808	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	0	2913	0	253	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGGTAATGGCTTTC	NA	False	NA	0	True	ACTAAA	-27	NA	71800794	71792893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ES.28723.8	chr6	-	1740	4	NNC	ENSMUSG00000052962.4	novel	3721	4	NA	NA	1	224	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	684.015756803566	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTAAATTTATTGTGC	NA	False	NA	-29	True	ATTAAA	-26	NA	71800746	71792922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71794281_71794588_71794734_71795652_71795843_71800699
ES.28723.9	chr6	-	561	3	NIC	ENSMUSG00000052962.4	novel	3721	4	NA	NA	-19	224	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	718.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTAAATTTATTGTGC	NA	False	NA	-29	True	ATTAAA	-26	NA	71800766	71792922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71793272_71794588_71794734_71800699
ES.28724.1	chr6	+	174	1	Intergenic	novelGene_23885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAACTCAGTTG	NA	False	NA	NA	False	NA	NA	NA	71801654	71801828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71801700_71801800
ES.28725.1	chr6	+	1628	1	Intergenic	novelGene_23886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGTGTGACTTAAGTAAAA	NA	False	NA	NA	False	AATAAA	-34	NA	71806083	71807711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_71806100_71807700
ES.28726.1	chr6	+	2796	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-66	21	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	457.116069058741	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATTTCCAGTTTGTT	NA	False	NA	33	True	AATAAA	-40	NA	71808248	71852262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.10	chr6	+	3089	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-27	196	intron_retention	FALSE	non_canonical	0	0	junction_9	412.301762130064	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTCCTATTGTATTG	NA	False	NA	9	True	TATAAA	-19	NA	71808287	71851712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.103	chr6	+	2011	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	-3	197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	628.263325012335	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTCCTATTGTATTGA	NA	False	NA	10	True	TATAAA	-20	NA	71808359	71851713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849879_71851300
ES.28726.104	chr6	+	1965	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-3	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	439.054690025438	1064	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATAAGATCACCGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71808359	71850116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777
ES.28726.105	chr6	+	5098	12	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-3	1	intron_retention	FALSE	non_canonical	0	0	junction_9	531.066134929936	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808359	71852242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71848543_71849777_71849908_71851300
ES.28726.106	chr6	+	4640	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-3	-1034	intron_retention	FALSE	non_canonical	0	0	junction_9	412.301762130064	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGACTTGAGAATTT	NA	False	NA	NA	False	AAAACA	-28	NA	71808359	71853335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.108	chr6	+	2111	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-3	192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	562.755393697914	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATATGCCTCCTATTGT	NA	False	NA	5	True	TATAAA	-15	NA	71808359	71851708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829843_71830155_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.110	chr6	+	2102	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-3	195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	576.517642155014	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCCTCCTATTGTATT	NA	False	NA	8	True	TATAAA	-18	NA	71808359	71851711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849879_71851300
ES.28726.112	chr6	+	3656	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	-3	-1040	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	567.328583998922	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTAATGTAGACTTGA	NA	False	NA	NA	False	AAAACA	-22	NA	71808359	71853329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.114	chr6	+	2720	15	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	591.98885210822	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808360	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829605_71829673_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.115	chr6	+	2033	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-2	192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	542.650459166242	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATATGCCTCCTATTGT	NA	False	NA	5	True	TATAAA	-15	NA	71808360	71851708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71851300
ES.28726.118	chr6	+	2652	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	546.587650035745	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808360	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821630_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.119	chr6	+	2571	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	445.70234835968	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTTCAAAGCTGCCA	NA	False	NA	20	True	AATAAA	-27	NA	71808361	71852249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839479_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.12	chr6	+	2665	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	546.377839096312	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTCTATCCCTTTTC	NA	False	NA	10	True	AATAAA	-17	NA	71808293	71852239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.122	chr6	+	2677	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	523.620407700986	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808364	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829728_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.123	chr6	+	2422	12	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	664.702294637131	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTGAGTACTCTATC	NA	False	NA	3	True	AATAAA	-10	NA	71808372	71852232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808506_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71851300
ES.28726.125	chr6	+	3735	13	NNC	ENSMUSG00000052337.16	novel	903	4	NA	NA	383	0	intron_retention	TRUE	non_canonical	0	0	junction_1	612.841350459753	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808825	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71809156_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845791_71848414_71848543_71849777_71849908_71851300
ES.28726.126	chr6	+	2655	13	NNC	ENSMUSG00000052337.16	novel	903	4	NA	NA	7168	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	612.415634779373	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	6188	False	NA	1	True	AATAAA	-8	NA	71815610	71852230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71815816_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.127	chr6	+	2499	12	NNC	ENSMUSG00000052337.16	novel	1494	3	NA	NA	7194	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	639.678677085109	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	6214	False	NA	9	True	AATAAA	-16	NA	71815636	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71815816_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.128	chr6	+	2712	14	NNC	ENSMUSG00000052337.16	novel	903	4	NA	NA	7226	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	527.344794744746	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTTCAAAGCTGCCA	6246	False	NA	20	True	AATAAA	-27	NA	71815668	71852249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71815816_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.129	chr6	+	7109	9	NNC	ENSMUSG00000052337.16	novel	2413	13	NA	NA	14979	0	intron_retention	FALSE	canonical	0	0	junction_5	471.17273902466	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71823421	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71823460_71828755_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.13	chr6	+	6232	12	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	428.565143991702	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTATCCCTTTTCA	NA	False	NA	11	True	AATAAA	-18	NA	71808295	71852240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71848543_71849777_71849908_71851300
ES.28726.130	chr6	+	4513	7	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-10350	0	intron_retention	FALSE	non_canonical	0	0	junction_5	633.129002126212	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71830182	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71848543_71851300
ES.28726.131	chr6	+	1442	5	ISM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	35308	-7	3177	0	3prime_fragment	FALSE	canonical	3	1330	junction_1	69.4208182031874	1080	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71843709	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.18	chr6	+	2508	13	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	597.900957981801	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808316	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829746_71829852_71830158_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.2	chr6	+	2824	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	533.561473640897	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808249	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838115_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.20	chr6	+	2309	11	NNC	ENSMUSG00000052337.16	novel	2469	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	619.476948723679	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808316	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.22	chr6	+	3635	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	525.191923217615	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808316	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71844544_71844610_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.24	chr6	+	2835	15	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	579.817533754352	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808316	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71818609_71818705_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.25	chr6	+	6216	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	1	1379	intron_retention	FALSE	non_canonical	0	0	junction_10	457.116069058741	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCTTGCATGTCACTG	NA	False	NA	NA	False	TATAAA	-19	NA	71808317	71855751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.26	chr6	+	2167	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	2	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	525.191923217615	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTCCTATTGTATTG	NA	False	NA	9	True	TATAAA	-19	NA	71808318	71851712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829743_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.28	chr6	+	1623	11	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	3	1870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	468.09802392234	1057	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTAGAGTGGTGTTTTA	NA	False	NA	NA	False	AATATA	-15	NA	71808319	71845878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845549
ES.28726.3	chr6	+	2811	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-62	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTTTTCAAAGCTGCC	NA	False	NA	19	True	AATAAA	-26	NA	71808252	71852248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.30	chr6	+	2674	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	545.847909978963	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808320	71852241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849879_71851300
ES.28726.32	chr6	+	3486	12	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	5	1	intron_retention	FALSE	non_canonical	0	0	junction_8	550.108494182648	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTCTATCCCTTTTC	NA	False	NA	10	True	AATAAA	-17	NA	71808321	71852239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.33	chr6	+	2612	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	7	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	567.328583998922	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTTCAAAGCTGCCA	NA	False	NA	20	True	AATAAA	-27	NA	71808323	71852249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.4	chr6	+	2591	9	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-41	16	intron_retention	FALSE	non_canonical	0	0	junction_4	634.129410589826	1051	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATAACTCCCATGGAT	NA	False	NA	NA	False	NA	NA	NA	71808273	71844024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830152_71830253_71833895_71834033_71837986_71838091_71839328_71839467_71843498
ES.28726.40	chr6	+	3586	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	10	7	intron_retention	FALSE	non_canonical	0	0	junction_9	412.301762130064	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTTTTCAAAGCTGCC	NA	False	NA	19	True	AATAAA	-26	NA	71808326	71852248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.42	chr6	+	2679	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	554.315036566133	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	NA	False	NA	1	True	AATAAA	-8	NA	71808327	71852230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828761_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.43	chr6	+	2213	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	11	270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	439.054690025438	1064	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACTTATTGAACATCAAA	NA	False	NA	NA	False	AATAAA	-10	NA	71808327	71850332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777
ES.28726.44	chr6	+	2731	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	11	18	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCCATTTCCAGTTT	NA	False	NA	30	True	AATAAA	-37	NA	71808327	71852259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.47	chr6	+	2502	12	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	11	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	562.584634587882	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTTTTCAAAGCTGCC	NA	False	NA	19	True	AATAAA	-26	NA	71808327	71852248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.50	chr6	+	2557	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	617.59052417889	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808330	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829779_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.51	chr6	+	2213	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	17	285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	532.484115569031	1064	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTATTTTAGTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	71808333	71850347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829722_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777
ES.28726.53	chr6	+	2590	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	542.650459166242	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTATCCCTTTTCA	NA	False	NA	11	True	AATAAA	-18	NA	71808335	71852240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71851300
ES.28726.54	chr6	+	3872	12	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	19	0	intron_retention	FALSE	non_canonical	0	0	junction_8	428.369597890296	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808335	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.55	chr6	+	2687	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	457.116069058741	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808336	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845544_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.60	chr6	+	2618	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-21	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	645.081215931707	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTGAGTACTCTATC	NA	False	NA	3	True	AATAAA	-10	NA	71808341	71852232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830181_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845549_71845788_71848410_71848543_71849777_71849879_71851300
ES.28726.62	chr6	+	3376	14	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	-19	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	623.659528188732	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCTATCTTCATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	71808343	71854364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300_71852902_71854232
ES.28726.63	chr6	+	2051	13	NNC	ENSMUSG00000052337.16	novel	2518	13	NA	NA	-19	192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	567.328583998922	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATATGCCTCCTATTGT	NA	False	NA	5	True	TATAAA	-15	NA	71808343	71851708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.64	chr6	+	2215	15	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-19	193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	591.58765976284	1073	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATGCCTCCTATTGTA	NA	False	NA	6	True	TATAAA	-16	NA	71808343	71851709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829605_71829673_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.65	chr6	+	2698	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	648.739797949676	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	NA	False	NA	1	True	AATAAA	-8	NA	71808343	71852230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71818609_71818705_71821624_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845548_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.66	chr6	+	2434	10	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	16	intron_retention	FALSE	canonical	3	1154	junction_4	146.828782457748	1051	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATAACTCCCATGGAT	NA	False	NA	NA	False	NA	NA	NA	71808343	71844024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709
ES.28726.67	chr6	+	2674	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	526.564942863893	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAACTGAGTACTCTAT	NA	False	NA	2	True	AATAAA	-9	NA	71808343	71852231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849879_71851300
ES.28726.69	chr6	+	3530	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	0	intron_retention	FALSE	non_canonical	0	0	junction_4	546.501366014355	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808343	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830181_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.7	chr6	+	2247	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-32	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTCCTATTGTATTGAG	NA	False	NA	11	True	TATAAA	-21	NA	71808282	71851714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.70	chr6	+	2603	13	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	545.652380947186	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808343	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.71	chr6	+	2151	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-19	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	457.116069058741	1073	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTCCTATTGTATTG	NA	False	NA	9	True	TATAAA	-19	NA	71808343	71851712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.72	chr6	+	3575	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	626.897846321251	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTGAGTACTCTATC	NA	False	NA	3	True	AATAAA	-10	NA	71808343	71852232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830158_71830253_71833895_71834033_71837986_71838115_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.73	chr6	+	2700	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	537.62619820288	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808343	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848420_71848543_71849777_71849908_71851300
ES.28726.75	chr6	+	2466	13	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	513.752933216822	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808344	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.77	chr6	+	2675	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-18	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	457.116069058741	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTTCAAAGCTGCCA	NA	False	NA	20	True	AATAAA	-27	NA	71808344	71852249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.78	chr6	+	618	6	NIC	ENSMUSG00000052337.16	novel	2469	13	NA	NA	-18	1280	combination_of_known_splicesites	FALSE	canonical	3	41	junction_3	641.223393210198	1046	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGAGAGATTGCTG	NA	False	NA	11	True	NA	NA	NA	71808344	71839367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71808500_71821622_71821697_71828755_71828865_71833895_71834033_71837986_71838091_71839328
ES.28726.79	chr6	+	7502	11	NNC	ENSMUSG00000052337.16	novel	2413	13	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_7	449.145956232492	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808344	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.8	chr6	+	2758	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	551.969148438934	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808282	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849932_71851300
ES.28726.80	chr6	+	2604	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	622.097571839731	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808344	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848530_71849773_71849908_71851300
ES.28726.81	chr6	+	2704	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	519.978083288701	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	False	NA	13	True	AATAAA	-20	NA	71808344	71852242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829722_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.82	chr6	+	3484	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	524.667389707503	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808344	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829673_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.87	chr6	+	2667	14	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	560.42848146774	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808345	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830162_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845549_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.88	chr6	+	2620	13	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-17	21	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	542.690186836734	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATTTCCAGTTTGTT	NA	False	NA	33	True	AATAAA	-40	NA	71808345	71852262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.89	chr6	+	2721	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	533.012972077009	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	NA	False	NA	1	True	AATAAA	-8	NA	71808348	71852230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849932_71851300
ES.28726.9	chr6	+	2575	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	495.562383952706	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTACTCTATCCCTTT	NA	False	NA	8	True	AATAAA	-15	NA	71808287	71852237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.90	chr6	+	2112	13	NNC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	-14	223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	467.691493757726	1064	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTTTTTTTTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	71808348	71850285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777
ES.28726.92	chr6	+	1580	11	ISM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	34	8204	-14	16	5prime_fragment	FALSE	canonical	3	675	junction_4	255.899589683141	1051	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATAACTCCCATGGAT	NA	False	NA	NA	False	NA	NA	NA	71808348	71844024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709
ES.28726.93	chr6	+	2678	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	540.633411108766	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	NA	False	NA	1	True	AATAAA	-8	NA	71808349	71852230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840130_71840259_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.94	chr6	+	3848	12	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-9	1	intron_retention	FALSE	non_canonical	0	0	junction_8	558.846583717062	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTCTATCCCTTTTC	NA	False	NA	10	True	AATAAA	-17	NA	71808353	71852239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71830253_71833895_71834033_71837993_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.96	chr6	+	2702	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	429.104185911608	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTATCCCTTTTCA	NA	False	NA	11	True	AATAAA	-18	NA	71808355	71852240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845545_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.97	chr6	+	4657	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	530.374998363317	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71808355	71852238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71822159_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.98	chr6	+	2669	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	543.236226363022	1082	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808355	71852234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830181_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71845788_71848410_71848543_71849777_71849908_71851300
ES.28726.99	chr6	+	5323	13	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	443.282515884496	1082	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTATCCCTTTTCA	NA	False	NA	11	True	AATAAA	-18	NA	71808355	71852240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840259_71845551_71848543_71849777_71849908_71851300
ES.28727.1	chr6	-	5719	1	Antisense	novelGene_ENSMUSG00000052337.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTCCTGTTTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	71837147	71831428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_71831400_71837100
ES.28728.1	chr6	-	172	1	Antisense	novelGene_ENSMUSG00000052337.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAAAGGACCT	NA	False	NA	NA	False	NA	NA	NA	71842680	71842508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_71842500_71842700
ES.28729.1	chr6	-	5193	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-15	2595	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGTGAGATGGCTCA	3033	False	NA	NA	False	AATAAA	-20	NA	71885749	71855026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.10	chr6	-	2727	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_14	207.74809342413	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3061	False	NA	-1	True	AATAAA	-28	NA	71885721	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71872023_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.100	chr6	-	2585	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	269.29177085689	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTAATTCTTTGTA	3043	False	NA	-12	True	AATAAA	-17	NA	71885739	71857632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884728_71884831_71885617
ES.28729.102	chr6	-	2513	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	317.373066316505	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCTAATTCTTTGTA	3039	False	NA	-12	True	AATAAA	-17	NA	71885743	71857632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862554_71865536_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884836_71885636
ES.28729.104	chr6	-	2568	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	211.907418775822	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATCTAATTCTTTGT	3049	False	NA	-13	True	AATAAA	-16	NA	71885733	71857633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865671_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.105	chr6	-	2302	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-9	-285	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTGTTTGCAGGCC	3039	False	NA	NA	False	NA	NA	NA	71885743	71857911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.106	chr6	-	2230	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	6	-285	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTGTTTGCAGGCC	3060	False	NA	NA	False	NA	NA	NA	71885722	71857911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.107	chr6	-	2181	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-9	-406	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCTAAGACCCTGGGG	3039	False	NA	NA	False	AATATA	-25	NA	71885743	71858032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.108	chr6	-	2088	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	-436	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAGCTCTGTATTGTA	3051	False	NA	NA	False	AATAAA	-21	NA	71885731	71858062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.109	chr6	-	1293	9	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-214	-436	intron_retention	FALSE	canonical	3	812	junction_8	87.1851478177333	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAGCTCTGTATTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	71866877	71858062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862561_71865540_71865648_71866324_71866350_71866573
ES.28729.12	chr6	-	2909	15	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-17	0	intron_retention	FALSE	canonical	3	11	junction_13	249.77194700407	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	7017	False	NA	-3	True	AATAAA	-26	NA	71874153	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096
ES.28729.13	chr6	-	6224	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	774	junction_14	84.4323180217777	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3049	False	NA	-3	True	AATAAA	-26	NA	71885733	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.14	chr6	-	4063	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_10	288.491722451273	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3049	False	NA	-3	True	AATAAA	-26	NA	71885733	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866673_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874149_71875323_71875440_71878179_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.16	chr6	-	7489	7	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2561	0	intron_retention	FALSE	canonical	3	25	junction_3	350.06939788181	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	NA	False	NA	-3	True	AATAAA	-26	NA	71869224	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71861523_71861610_71862292_71862384_71862481_71866350_71866573
ES.28729.17	chr6	-	2498	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	212.929881175754	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3044	False	NA	-3	True	AATAAA	-26	NA	71885738	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71865548_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.18	chr6	-	2591	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	211.907418775822	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3031	False	NA	-3	True	AATAAA	-26	NA	71885751	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866555_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.19	chr6	-	2167	2	ISM	ENSMUSG00000063884.7	ENSMUST00000205269.2	1161	3	-485	2	-485	0	intron_retention	FALSE	canonical	3	959	junction_1	0	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	NA	False	NA	-3	True	AATAAA	-26	NA	71860064	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71858216_71858489
ES.28729.2	chr6	-	3924	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-12	1329	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACCCCTTATTTTCA	3036	False	NA	NA	False	ATTAAA	-15	NA	71885746	71856292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.21	chr6	-	6406	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_7	327.796591458637	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3037	False	NA	-3	True	AATAAA	-26	NA	71885745	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71863110_71863285_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.22	chr6	-	3682	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4	junction_13	212.345291276432	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3051	False	NA	-3	True	AATAAA	-26	NA	71885731	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71872023_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.23	chr6	-	6685	21	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_5	212.047730475947	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3049	False	NA	-3	True	AATAAA	-26	NA	71885733	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.24	chr6	-	2650	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	262.360895846583	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3060	False	NA	-3	True	AATAAA	-26	NA	71885722	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.25	chr6	-	3989	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	774	junction_15	90.3389937227999	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3052	False	NA	-3	True	AATAAA	-26	NA	71885730	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.26	chr6	-	3649	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	0	intron_retention	FALSE	canonical	2	3	junction_8	326.075895566387	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3051	False	NA	-3	True	AATAAA	-26	NA	71885731	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.27	chr6	-	2596	24	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	318.567172631238	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3049	False	NA	-3	True	AATAAA	-26	NA	71885733	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869514_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.28	chr6	-	2610	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	206.244564572934	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3046	False	NA	-3	True	AATAAA	-26	NA	71885736	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884609_71884674_71884777_71884831_71885617
ES.28729.29	chr6	-	2556	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	273.031888427522	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3044	False	NA	-3	True	AATAAA	-26	NA	71885738	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860236_71860357_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.3	chr6	-	5441	21	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_5	212.901497176511	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3049	False	NA	-1	True	AATAAA	-28	NA	71885733	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.30	chr6	-	3809	23	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	30	junction_3	206.044988267326	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3044	False	NA	-3	True	AATAAA	-26	NA	71885738	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.31	chr6	-	5565	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-4	0	intron_retention	FALSE	canonical	3	774	junction_15	89.1993310577889	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3044	False	NA	-3	True	AATAAA	-26	NA	71885738	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.32	chr6	-	3048	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	774	junction_16	89.4501684997189	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3046	False	NA	-3	True	AATAAA	-26	NA	71885736	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.33	chr6	-	4278	20	NIC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-10	0	intron_retention	FALSE	canonical	2	3	junction_4	226.793864695921	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3038	False	NA	-3	True	AATAAA	-26	NA	71885744	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71862292_71862384_71862481_71862561_71865540_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.34	chr6	-	3526	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	53	junction_4	203.583663026383	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3046	False	NA	-3	True	AATAAA	-26	NA	71885736	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.35	chr6	-	2568	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	208.488692670957	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3048	False	NA	-3	True	AATAAA	-26	NA	71885734	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871853_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.36	chr6	-	7103	8	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	2666	0	intron_retention	FALSE	canonical	2	23	junction_4	340.963281283591	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	NA	False	NA	-3	True	AATAAA	-26	NA	71869452	71857623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71862292_71862384_71862481_71865648_71866324_71866350_71866573
ES.28729.38	chr6	-	2636	25	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	268.772282667978	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3049	False	NA	-4	True	AATAAA	-25	NA	71885733	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71871940_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.4	chr6	-	4740	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_3	206.425006834715	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.42	chr6	-	2589	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	322.292426475189	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3034	False	NA	-4	True	AATAAA	-25	NA	71885748	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.43	chr6	-	5995	19	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1027	0	intron_retention	FALSE	canonical	2	7	junction_11	227.49567897131	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	4107	False	NA	-4	True	AATAAA	-25	NA	71884675	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636
ES.28729.44	chr6	-	4138	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-14	0	intron_retention	FALSE	canonical	3	4	junction_13	282.333457822299	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3034	False	NA	-4	True	AATAAA	-25	NA	71885748	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71872023_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.45	chr6	-	4591	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-11	0	intron_retention	FALSE	canonical	2	14	junction_3	213.602986467101	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3037	False	NA	-4	True	AATAAA	-25	NA	71885745	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860236_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.46	chr6	-	5043	5	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	1223	0	intron_retention	FALSE	canonical	3	53	junction_4	423.915970446974	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	NA	False	NA	-4	True	AATAAA	-25	NA	71865365	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861606_71862292
ES.28729.47	chr6	-	4306	10	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	2578	0	intron_retention	FALSE	canonical	3	30	junction_4	301.285025626344	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	NA	False	NA	-4	True	AATAAA	-25	NA	71869540	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573
ES.28729.48	chr6	-	3094	21	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-2	0	intron_retention	FALSE	canonical	2	7	junction_12	287.985498766865	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3046	False	NA	-4	True	AATAAA	-25	NA	71885736	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.5	chr6	-	2584	24	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	270.810831792706	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3049	False	NA	-1	True	AATAAA	-28	NA	71885733	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865548_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.50	chr6	-	2519	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	210.928584522333	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3048	False	NA	-4	True	AATAAA	-25	NA	71885734	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.52	chr6	-	2787	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4	junction_12	269.077874405034	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3045	False	NA	-4	True	AATAAA	-25	NA	71885737	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71872023_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.53	chr6	-	4456	20	NIC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-9	0	intron_retention	FALSE	canonical	3	5	junction_9	298.748543964277	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3039	False	NA	-4	True	AATAAA	-25	NA	71885743	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.54	chr6	-	7771	21	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-11	0	intron_retention	FALSE	canonical	3	774	junction_14	85.7728978174341	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3037	False	NA	-4	True	AATAAA	-25	NA	71885745	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.56	chr6	-	3564	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	intron_retention	FALSE	canonical	3	11	junction_7	323.781482403036	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3046	False	NA	-4	True	AATAAA	-25	NA	71885736	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865548_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.57	chr6	-	2570	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	204.47785872068	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3044	False	NA	-4	True	AATAAA	-25	NA	71885738	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859185_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.58	chr6	-	3440	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_5	281.18592391783	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTTGTAAGCGTGTA	3044	False	NA	-4	True	AATAAA	-25	NA	71885738	71857624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861606_71862292_71862384_71865548_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.59	chr6	-	2430	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	269.682336014572	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3058	False	NA	-6	True	AATAAA	-23	NA	71885724	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71865548_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.60	chr6	-	7585	3	FSM	ENSMUSG00000063884.7	ENSMUST00000205269.2	1161	3	-6429	5	580	0	multi-exon	FALSE	canonical	3	959	junction_1	68	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	NA	False	NA	-6	True	AATAAA	-23	NA	71866008	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_71858216_71858489_71858649_71859171
ES.28729.61	chr6	-	2431	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	206.991740363021	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3046	False	NA	-6	True	AATAAA	-23	NA	71885736	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.62	chr6	-	7133	20	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	140	junction_7	199.390400611353	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3052	False	NA	-6	True	AATAAA	-23	NA	71885730	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71862384_71862481_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.63	chr6	-	3596	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	53	junction_5	203.161743974785	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3049	False	NA	-6	True	AATAAA	-23	NA	71885733	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.65	chr6	-	3441	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-5	0	intron_retention	FALSE	canonical	3	53	junction_5	203.200288971292	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3043	False	NA	-6	True	AATAAA	-23	NA	71885739	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.66	chr6	-	2577	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	271.306800809138	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3037	False	NA	-6	True	AATAAA	-23	NA	71885745	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878329_71879839_71879945_71880409_71880479_71882081_71882128_71884777_71884831_71885617
ES.28729.67	chr6	-	2545	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	278.998606129533	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3050	False	NA	-6	True	AATAAA	-23	NA	71885732	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866320_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882183_71885617
ES.28729.68	chr6	-	2502	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_4	209.245264172245	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	3038	False	NA	-6	True	AATAAA	-23	NA	71885744	71857626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.69	chr6	-	3545	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	140	junction_10	189.956171099482	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTCTTTGTAAGCGT	3052	False	NA	-7	True	AATAAA	-22	NA	71885730	71857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.7	chr6	-	2598	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3033	False	NA	-1	True	AATAAA	-28	NA	71885749	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.70	chr6	-	2549	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	264.159875661117	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTCTTTGTAAGCGT	3037	False	NA	-7	True	AATAAA	-22	NA	71885745	71857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884728_71884831_71885617
ES.28729.71	chr6	-	2432	22	NIC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	215.718732215289	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTCTTTGTAAGCGT	3049	False	NA	-7	True	AATAAA	-22	NA	71885733	71857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.72	chr6	-	5132	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	774	junction_15	90.9124818992385	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTCTTTGTAAGCGT	3052	False	NA	-7	True	AATAAA	-22	NA	71885730	71857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71872977_71874096_71874153_71875323_71875440_71878179_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.73	chr6	-	3672	22	NIC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	1	-1	intron_retention	FALSE	canonical	3	30	junction_4	211.5191997954	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATTCTTTGTAAGCGT	3049	False	NA	-7	True	AATAAA	-22	NA	71885733	71857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.74	chr6	-	2469	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	316.801818634694	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3048	False	NA	-11	True	AATAAA	-18	NA	71885734	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865548_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882120_71884777_71884831_71885617
ES.28729.79	chr6	-	8670	19	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	774	junction_11	91.7865209717569	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3052	False	NA	-11	True	AATAAA	-18	NA	71885730	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71861610_71862292_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.8	chr6	-	2542	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3038	False	NA	-1	True	AATAAA	-28	NA	71885744	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.80	chr6	-	2455	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	867	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	212.068156243605	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3947	False	NA	-11	True	AATAAA	-18	NA	71884835	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860571_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777
ES.28729.81	chr6	-	3424	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	11	junction_7	210.69248281334	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3051	False	NA	-11	True	AATAAA	-18	NA	71885731	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865548_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.82	chr6	-	2794	7	ISM	ENSMUSG00000063884.7	ENSMUST00000206879.2	2666	25	21580	7	2434	-5	3prime_fragment	FALSE	canonical	3	30	junction_4	359.746091014204	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	NA	False	NA	-11	True	AATAAA	-18	NA	71864154	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481
ES.28729.83	chr6	-	2479	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_20	258.570165742773	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3054	False	NA	-11	True	AATAAA	-18	NA	71885728	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884777_71884831_71885617
ES.28729.84	chr6	-	2579	24	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	203.390384220087	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3052	False	NA	-11	True	AATAAA	-18	NA	71885730	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.87	chr6	-	4043	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	1	-5	intron_retention	FALSE	canonical	3	774	junction_14	90.600265801295	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3049	False	NA	-11	True	AATAAA	-18	NA	71885733	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.9	chr6	-	4726	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-4	0	intron_retention	FALSE	canonical	3	11	junction_14	329.044407675047	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3044	False	NA	-1	True	AATAAA	-28	NA	71885738	71857621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860587_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871998_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.90	chr6	-	4250	6	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	2178	-5	intron_retention	FALSE	canonical	3	53	junction_4	371.672974535411	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	NA	False	NA	-11	True	AATAAA	-18	NA	71864410	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71860577_71861523_71861606_71862292_71862384_71862481
ES.28729.91	chr6	-	2547	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	208.785026152638	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3048	False	NA	-11	True	AATAAA	-18	NA	71885734	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879905_71880395_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.28729.92	chr6	-	5484	13	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-561	-5	intron_retention	FALSE	canonical	1	7	junction_12	269.636007218785	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	8491	False	NA	-11	True	AATAAA	-18	NA	71872679	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71870511_71871270_71871357_71871804_71871866_71872601
ES.28729.93	chr6	-	2529	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	209.232066976455	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3046	False	NA	-11	True	AATAAA	-18	NA	71885736	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71884636_71884674_71884777_71884831_71885617
ES.28729.97	chr6	-	2495	22	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	321.734972128069	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3054	False	NA	-11	True	AATAAA	-18	NA	71885728	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865658_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884783_71884831_71885617
ES.28729.98	chr6	-	2714	25	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.366531929198	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	3037	False	NA	-11	True	AATAAA	-18	NA	71885745	71857631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860236_71860357_71860427_71860587_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ES.2873.1	chr10	-	3291	1	Genic_Genomic	ENSMUSG00000093489.2	novel	NA	NA	NA	NA	-3074	-4366	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	60881664	60878373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_60878400_60881700
ES.28730.1	chr6	+	8078	35	NIC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	-200	273	combination_of_known_junctions	FALSE	canonical	1	1	junction_34	68.860146116483	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCTCACGGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	71885836	71962192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398_71957252_71961330
ES.28730.10	chr6	+	6131	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	1	-3115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	69.9926140665936	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71886037	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925310_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.11	chr6	+	6159	35	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	-3117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	104.306778203714	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886038	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71928966_71929046_71929969_71930069_71931676_71931830_71938532_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.13	chr6	+	3432	21	NNC	ENSMUSG00000049553.12	novel	3394	21	NA	NA	2	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	96.9378151187657	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886038	71932160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889001_71889088_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.14	chr6	+	6174	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	-3042	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	69.9859227613429	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCAGGCTCCTCTTCCT	NA	False	NA	93	True	NA	NA	NA	71886038	71956417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927569_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.15	chr6	+	6092	35	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	3	-3117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.0007556742427	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886039	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889001_71889088_71889957_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.16	chr6	+	6192	35	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	3	-3115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.0007556742427	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71886039	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889001_71889088_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.17	chr6	+	4226	21	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	4	1467	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	73.4063348764941	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCTATGAGTTGATTAA	NA	False	NA	NA	False	NA	NA	NA	71886040	71933601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71932388
ES.28730.18	chr6	+	9226	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-4	-6	4	6	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCATCTGGATGCAAATG	NA	False	NA	NA	False	NA	NA	NA	71886040	71959465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.2	chr6	+	3372	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-24	27291	-16	34	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886020	71932168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.20	chr6	+	6051	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	4	-3115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	69.8827957535502	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71886040	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908631_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.21	chr6	+	3246	20	NNC	ENSMUSG00000049553.12	novel	3394	21	NA	NA	4	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.8312384924705	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886040	71932160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889957_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.22	chr6	+	6094	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	4	-3118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	90.0246981721779	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAAGACTTAAGTTTTT	NA	False	NA	17	True	AATAAA	-27	NA	71886040	71956341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903797_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944851_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.24	chr6	+	5902	33	NIC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	-2	-3115	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	67.8331765712767	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71886042	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71954317_71954436_71954927_71955093_71955398
ES.28730.25	chr6	+	5539	19	NIC	ENSMUSG00000049553.12	novel	3394	21	NA	NA	-1	1384	intron_retention	FALSE	canonical	3	275	junction_3	23.4674058174837	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAATAACACACAATCC	NA	False	NA	NA	False	NA	NA	NA	71886043	71933518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.27	chr6	+	4824	19	NNC	ENSMUSG00000049553.12	novel	3394	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_1	77.4411963291431	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71886043	71932133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889957_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969
ES.28730.3	chr6	+	6128	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-21	3109	-13	-3109	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTTTTTAATCTTTCC	NA	False	NA	26	True	AATAAA	-36	NA	71886023	71956350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.30	chr6	+	10331	32	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	-1	-3117	intron_retention	FALSE	non_canonical	0	0	junction_20	71.9531585403546	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886043	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71932406_71937745_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.31	chr6	+	11563	32	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	-1	-3117	intron_retention	FALSE	non_canonical	0	0	junction_16	92.8171420171794	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886043	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927569_71927647_71927746_71930069_71931676_71932406_71937745_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.34	chr6	+	7534	35	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	-1	-3117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	104.370530383134	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886043	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925473_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71932497_71933943_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.35	chr6	+	7093	33	NIC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	0	-3122	intron_retention	FALSE	canonical	3	275	junction_3	36.4076180000491	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAATCAAGACTTAAGT	NA	False	NA	13	True	AATAAA	-23	NA	71886044	71956337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.36	chr6	+	3662	20	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	75.5251604532943	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886044	71932132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71907122_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.37	chr6	+	5759	31	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	0	5369	0	-5369	5prime_fragment	FALSE	canonical	3	275	junction_3	28.4369868696074	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCCTACGTTGTCTCG	NA	False	NA	NA	False	AATGAA	-29	NA	71886044	71954090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002
ES.28730.38	chr6	+	3476	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	0	27163	0	162	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGGTGCTTATGTCA	NA	False	NA	NA	False	NA	NA	NA	71886044	71932296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.39	chr6	+	4039	21	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	0	1393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	74.029639334526	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAATCCCGGAAACTT	NA	False	NA	NA	False	NA	NA	NA	71886044	71933527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71932497
ES.28730.41	chr6	+	6063	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	1	-3121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	90.0391405554047	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAATCAAGACTTAAGTT	NA	False	NA	14	True	AATAAA	-24	NA	71886045	71956338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927569_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951109_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.43	chr6	+	5310	33	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	1	4211	1	-4211	5prime_fragment	FALSE	canonical	3	275	junction_3	38.3070321342896	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGCCATAGCATGAGT	NA	False	NA	NA	False	AATAAA	-27	NA	71886045	71955248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927
ES.28730.45	chr6	+	7839	35	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	3751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	88.82002330439	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATACCTGTGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	71886046	71965670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951082_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398_71958072_71965659
ES.28730.48	chr6	+	7010	18	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	2	27299	2	26	intron_retention	FALSE	canonical	3	275	junction_3	23.4643217345754	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886046	71932160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746
ES.28730.49	chr6	+	3290	20	NNC	ENSMUSG00000049553.12	novel	3394	21	NA	NA	2	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	75.9516904339752	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886046	71932164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906344_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.5	chr6	+	3224	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-9	27424	-1	16	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTGGCTCATG	NA	False	NA	NA	False	AGTAAA	-14	NA	71886035	71932035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.50	chr6	+	6001	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	-3115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.0300735608529	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71886046	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889957_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.51	chr6	+	5311	29	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	-3118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	74.7939346007497	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAAGACTTAAGTTTTT	NA	False	NA	17	True	AATAAA	-27	NA	71886046	71956341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942652_71951709_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.53	chr6	+	6049	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	3	-3117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.9268859226978	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886047	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892098_71894706_71894834_71897434_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.55	chr6	+	4769	20	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	8	25862	0	1463	5prime_fragment	FALSE	canonical	3	275	junction_3	22.8414989005135	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGATCTATGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	71886052	71933597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.56	chr6	+	6439	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2	-3117	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	69.5939818809758	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886054	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71907122_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.57	chr6	+	6032	34	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	9	-3117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	69.9265651802399	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71886061	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951134_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.58	chr6	+	5927	33	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	3810	3115	479	-3115	3prime_fragment	FALSE	canonical	3	275	junction_2	38.6056661765796	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71889854	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.59	chr6	+	6013	33	NNC	ENSMUSG00000049553.12	novel	4572	15	NA	NA	993	-3113	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	70.4614256171418	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTAAGTTTTTAATCT	NA	False	NA	22	True	AATAAA	-32	NA	71890368	71956346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71890663_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.61	chr6	+	4834	18	NNC	ENSMUSG00000049553.12	novel	625	5	NA	NA	1021	30	intron_retention	FALSE	canonical	2	3	junction_1	79.0079931132195	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71890396	71932164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71890663_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969
ES.28730.62	chr6	+	5575	32	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	2756	-3115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.8959098435874	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71892131	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71892155_71894725_71894834_71897425_71897512_71897632_71897718_71901569_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.63	chr6	+	5568	31	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	8680	3115	5349	-3115	3prime_fragment	FALSE	canonical	3	306	junction_6	36.9548673684837	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71894724	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.64	chr6	+	5463	30	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	11377	3115	-5656	-3115	3prime_fragment	FALSE	canonical	3	306	junction_5	37.1927843870788	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71897421	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.65	chr6	+	2487	14	NNC	ENSMUSG00000049553.12	novel	3302	20	NA	NA	-1507	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	90.2785957581918	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71901570	71932132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908813_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.66	chr6	+	5286	28	NNC	ENSMUSG00000049553.12	novel	4572	15	NA	NA	-563	-3115	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.7670967455237	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	NA	False	NA	20	True	AATAAA	-30	NA	71902514	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71902640_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.67	chr6	+	3659	15	NNC	ENSMUSG00000049553.12	novel	625	5	NA	NA	-552	1391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.457243632024	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACACACAATCCCGGAAAC	NA	False	NA	NA	False	NA	NA	NA	71902525	71933525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71902979_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71932388
ES.28730.68	chr6	+	2723	14	NNC	ENSMUSG00000049553.12	novel	625	5	NA	NA	-548	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.0110208554973	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGTGTTGGCTCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	71902529	71932034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71902979_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676
ES.28730.69	chr6	+	4721	24	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	20602	3117	-1518	-3117	3prime_fragment	FALSE	canonical	3	306	junction_1	37.5382854342861	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	NA	False	NA	18	True	AATAAA	-28	NA	71906646	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.7	chr6	+	4960	19	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-8	27295	0	30	intron_retention	FALSE	canonical	3	275	junction_3	23.056626481152	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71886036	71932164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969
ES.28730.70	chr6	+	4114	21	ISM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	32284	3115	5353	-3115	3prime_fragment	FALSE	canonical	3	318	junction_1	37.333095237336	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTTAAGTTTTTAAT	5934	False	NA	20	True	AATAAA	-30	NA	71918328	71956344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.72	chr6	+	6253	3	ISM	ENSMUSG00000049553.12	ENSMUST00000206513.2	625	5	2517	-5965	2516	5651	3prime_fragment	FALSE	canonical	3	337	junction_1	2.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATCCCCTTTTGGGTGT	1766	False	NA	NA	False	AATACA	-14	NA	71927860	71937785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_71927906_71929969_71930069_71931676
ES.28730.73	chr6	+	3102	16	NNC	ENSMUSG00000049553.12	novel	9216	34	NA	NA	4703	-3119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	98.7187700265535	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCAAGACTTAAGTTTT	3953	False	NA	16	True	AATAAA	-26	NA	71930047	71956340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943456_71944383_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.74	chr6	+	6806	13	NNC	ENSMUSG00000049553.12	novel	4572	15	NA	NA	3300	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.11664916754	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGCGAGATGGCTC	5799	False	NA	NA	False	ATTAAA	-14	NA	71941823	71961923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398_71959889_71961330
ES.28730.75	chr6	+	2060	8	NNC	ENSMUSG00000049553.12	novel	4572	15	NA	NA	6376	-3117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	140.632100727757	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGACTTAAGTTTTTA	8875	False	NA	18	True	AATAAA	-28	NA	71944899	71956342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71952985_71953204_71954317_71954436_71954927_71955093_71955398
ES.28730.76	chr6	+	4945	2	NNC	ENSMUSG00000049553.12	novel	4572	15	NA	NA	17281	272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCACGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	71955804	71962191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_71959889_71961330
ES.28730.8	chr6	+	7874	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	-8	1350	0	-1350	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCTGGTTCTCCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	71886036	71958109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ES.28731.1	chr6	-	4647	1	Antisense	novelGene_ENSMUSG00000049553.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCGGGATCAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	71895098	71890451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_71890500_71895100
ES.28732.1	chr6	+	181	1	Intergenic	novelGene_23887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAGGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	72066300	72066481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72066300_72066500
ES.28733.1	chr6	+	2264	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	-15	9	-15	-9	multi-exon	FALSE	canonical	3	38	junction_5	8.15304987242334	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	NA	False	NA	11	True	NA	NA	NA	72074560	72131546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ES.28733.2	chr6	+	2601	9	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8493230085432	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	NA	False	NA	11	True	NA	NA	NA	72074575	72131546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72074767_72088239_72088384_72092155_72092364_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ES.28733.3	chr6	+	2306	8	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1542661123987	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTTGAGTGTTTGTT	NA	False	NA	15	True	NA	NA	NA	72074583	72131550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72074767_72075900_72075962_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ES.28733.4	chr6	+	2224	7	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.5071047692514	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	NA	False	NA	11	True	NA	NA	NA	72074592	72131546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119460_72124052_72124240_72126002_72126162_72130414
ES.28733.5	chr6	+	1881	5	NIC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	-9	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.7001945517928	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	NA	False	NA	11	True	NA	NA	NA	72074597	72131546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72130414
ES.28733.6	chr6	+	2280	8	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	6	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.5729646253404	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTGTGATTTCCTGAC	NA	False	NA	1	True	NA	NA	NA	72074612	72131536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72074767_72105247_72105372_72109035_72109148_72119121_72119468_72124052_72124240_72125785_72125862_72126002_72126162_72130414
ES.28733.7	chr6	+	2206	8	NNC	ENSMUSG00000056091.13	novel	2258	7	NA	NA	11067	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1542661123987	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTGACTTTGAGTGTT	3348	False	NA	11	True	NA	NA	NA	72103282	72131546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72103332_72103895_72103995_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ES.28734.1	chr6	-	177	1	Intergenic	novelGene_23888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATGAAATAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	72145209	72145032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72145000_72145200
ES.28735.1	chr6	+	176	1	Intergenic	novelGene_23889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACAC	8914	False	NA	NA	False	NA	NA	NA	72171735	72171911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72171700_72171900
ES.28736.1	chr6	+	3471	2	Intergenic	novelGene_23890	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72291540	72295221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72293927_72294136
ES.28737.1	chr6	+	4655	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-36	-14	-19	14	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAAATCACTTGTGTA	8290	False	NA	29	True	AATAAA	-29	NA	72324280	72330145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
ES.28737.2	chr6	+	5032	2	FSM	ENSMUSG00000058706.6	ENSMUST00000205472.2	1033	2	-19	-3980	-10	7	multi-exon	FALSE	canonical	3	49	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAAGTTGTGAAATCAC	8299	False	NA	22	True	AATAAA	-22	NA	72324289	72330138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72324695_72325511
ES.28737.3	chr6	+	4944	3	ISM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	-17	-6	0	6	intron_retention	FALSE	canonical	3	33	junction_1	8	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAAAGTTGTGAAATCA	8309	False	NA	21	True	AATAAA	-21	NA	72324299	72330137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_72324499_72324575_72324695_72325511
ES.28737.4	chr6	+	4691	3	FSM	ENSMUSG00000058706.6	ENSMUST00000204152.2	2118	3	-42	-2531	-1	0	multi-exon	FALSE	canonical	3	40	junction_2	4.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8317	False	NA	15	True	AATAAA	-15	NA	72324307	72330131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72324695_72325511_72325664_72325979
ES.28737.5	chr6	+	1820	2	FSM	ENSMUSG00000058706.6	ENSMUST00000205472.2	1033	2	0	-787	0	-655	multi-exon	FALSE	canonical	3	49	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAAGAA	8318	False	NA	NA	False	NA	NA	NA	72324308	72326945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72324695_72325511
ES.28737.6	chr6	+	4460	3	NIC	ENSMUSG00000058706.6	novel	4605	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8319	False	NA	15	True	AATAAA	-15	NA	72324309	72330131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72324499_72324575_72324695_72325979
ES.28737.7	chr6	+	5807	1	FSM	ENSMUSG00000058706.6	ENSMUST00000205578.2	3900	1	24	-1931	7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTGCCAAAAGTTGT	8333	False	NA	14	True	AATAAA	-14	NA	72324323	72330130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72324300_72330100
ES.28738.1	chr6	+	1592	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	-46	0	-46	0	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTTCTGGAGAAT	NA	False	NA	10	True	ATTAAA	-21	NA	72332383	72336745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ES.28738.3	chr6	+	1364	8	NNC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.7145246051609	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	False	NA	5	True	ATTAAA	-16	NA	72332460	72336740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72332528_72333259_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ES.28738.4	chr6	+	1548	8	NNC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	41.9075756631087	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	False	NA	5	True	ATTAAA	-16	NA	72332463	72336740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335460_72335561_72335740_72335988
ES.28738.5	chr6	+	1472	8	NNC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	41.9075756631087	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTGCAGTGTGTTCTG	NA	False	NA	4	True	ATTAAA	-15	NA	72332465	72336739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335322_72335419_72335561_72335740_72335988
ES.28738.6	chr6	+	1622	4	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	1306	5	527	-5	intron_retention	FALSE	canonical	3	98	junction_3	7.36357401145817	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	False	NA	5	True	ATTAAA	-16	NA	72333735	72336740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_72333753_72334032_72334120_72334931_72335000_72335290
ES.28738.7	chr6	+	970	2	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	3089	8	2310	-8	3prime_fragment	FALSE	canonical	3	133	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACGTCTGCAGTGTGTTC	NA	False	NA	2	True	ATTAAA	-13	NA	72335518	72336737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_72335740_72335988
ES.28739.1	chr6	+	176	1	Intergenic	novelGene_23892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAGAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	72342755	72342931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72342800_72342900
ES.2874.1	chr10	-	232	1	Intergenic	novelGene_2201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTCCTTAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	60918234	60918002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_60918000_60918200
ES.28740.1	chr6	-	3641	3	NNC	ENSMUSG00000050732.10	novel	820	3	NA	NA	1864	127453	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAATGCAAATC	9651	False	NA	NA	False	NA	NA	NA	72365030	72234752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72234931_72361363_72364264_72364467
ES.28740.10	chr6	-	2059	12	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	4	-94	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	184.788465168971	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	-27	True	ATTAAA	-16	NA	72322163	72295754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72296223_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.11	chr6	-	2058	12	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	22	-94	combination_of_known_splicesites	FALSE	canonical	1	9	junction_11	185.715947681238	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	-27	True	ATTAAA	-16	NA	72322145	72295754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72321867
ES.28740.12	chr6	-	3583	12	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	4	-94	intron_retention	FALSE	canonical	3	571	junction_6	48.8475449191472	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	-27	True	ATTAAA	-16	NA	72322163	72295754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72317045_72319881_72319952_72321867
ES.28740.15	chr6	-	1981	12	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	26	-94	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	190.136966725838	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	-27	True	ATTAAA	-16	NA	72322141	72295754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72296223_72296722_72296810_72298238_72298375_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.2	chr6	-	3818	14	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	4	1787	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	175.932746698694	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATGGCTCAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	72322163	72293873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72293940_72294148_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.20	chr6	-	2126	13	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	1	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	183.070322705663	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTTGTTTCAT	NA	False	NA	-27	True	ATTAAA	-16	NA	72322166	72295754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313452_72314690_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.22	chr6	-	2113	13	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	29	-95	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_12	177.981955233919	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCAGGCTGTTGTTTCA	NA	False	NA	-28	True	ATTAAA	-15	NA	72322138	72295755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321874
ES.28740.23	chr6	-	2140	13	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	29	-96	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	180.654885070955	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCAGGCTGTTGTTTC	NA	False	NA	-29	True	ATTAAA	-14	NA	72322138	72295756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319973_72321867
ES.28740.24	chr6	-	2059	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	4	181	4	-181	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTGTCATAGGTAGT	NA	False	NA	-114	True	AGTAAA	-16	NA	72322163	72295841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.25	chr6	-	1836	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	-19	427	-19	-427	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTCCTGCCCCAGTCC	NA	False	NA	0	True	AATAAA	-35	NA	72322186	72296087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.27	chr6	-	1718	12	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	4	-444	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	191.589091978874	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACAGACTGACTGAAA	NA	False	NA	-17	True	AATAAA	-18	NA	72322163	72296104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.28	chr6	-	10539	6	NIC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	25	-5377	intron_retention	FALSE	canonical	3	590	junction_2	46.4818244048144	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTATTCACAGTGCT	NA	False	NA	NA	False	NA	NA	NA	72322142	72303659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.29	chr6	-	177	1	Intergenic	novelGene_23891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAACTG	6775	False	NA	NA	False	NA	NA	NA	72303998	72303821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72303800_72304000
ES.28740.3	chr6	-	3771	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	1	-1528	1	1528	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTTA	NA	False	NA	NA	False	CATAAA	-8	NA	72322166	72294132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.30	chr6	-	1439	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	-3	-2	-3	2	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTTCTGCTGTGTTA	8405	False	NA	NA	False	TATAAA	-17	NA	72339418	72336694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.32	chr6	-	1370	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTCGTGTGGTTCTGCTG	8434	False	NA	NA	False	TATAAA	-12	NA	72339389	72336699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
ES.28740.33	chr6	-	1256	4	FSM	ENSMUSG00000055850.13	ENSMUST00000151063.2	617	4	-23	-616	2	-6	multi-exon	FALSE	canonical	2	47	junction_3	415.627236836086	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8452	False	NA	NA	False	TATAAA	-9	NA	72339371	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339223
ES.28740.34	chr6	-	1314	6	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.011895920113	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8448	False	NA	NA	False	TATAAA	-9	NA	72339375	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72337380_72337453_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.36	chr6	-	2502	2	ISM	ENSMUSG00000055850.13	ENSMUST00000133978.2	728	4	40	-893	2	-6	intron_retention	FALSE	canonical	3	875	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8452	False	NA	NA	False	TATAAA	-9	NA	72339371	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_72337933_72338099
ES.28740.38	chr6	-	1381	5	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	389.700205286063	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8447	False	NA	NA	False	TATAAA	-9	NA	72339376	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.4	chr6	-	2992	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	4	-752	4	752	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGATTAGCAGTGATGG	NA	False	NA	NA	False	AATAAA	-23	NA	72322163	72294908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.41	chr6	-	1462	4	NNC	ENSMUSG00000055850.13	novel	1191	4	NA	NA	-75	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	437.683548798546	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8642	False	NA	NA	False	TATAAA	-9	NA	72339181	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338827
ES.28740.42	chr6	-	1585	4	FSM	ENSMUSG00000055850.13	ENSMUST00000133978.2	728	4	36	-893	1	-6	multi-exon	FALSE	canonical	3	73	junction_3	424.755877599776	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8448	False	NA	NA	False	TATAAA	-9	NA	72339375	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337933_72338099_72338210_72338394_72338523_72339258
ES.28740.44	chr6	-	1252	4	NNC	ENSMUSG00000055850.13	novel	617	4	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_3	388.219010353692	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8448	False	NA	NA	False	TATAAA	-9	NA	72339375	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72337618_72337857_72337933_72338099_72338210_72339223
ES.28740.46	chr6	-	1754	3	NIC	ENSMUSG00000055850.13	novel	728	4	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	73	junction_2	487.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATACTCGTGTGGTTCTG	8446	False	NA	NA	False	TATAAA	-9	NA	72339377	72336702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72338210_72338394_72338523_72339258
ES.28740.48	chr6	-	1173	4	FSM	ENSMUSG00000055850.13	ENSMUST00000069595.13	1191	4	1	17	1	-17	multi-exon	FALSE	canonical	0	0	junction_3	437.683548798546	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTACTAAAATACTC	8448	False	NA	NA	False	AATAGA	-4	NA	72339375	72336713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339299
ES.28740.49	chr6	-	1304	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	-2	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	422.626534306591	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTACTAAAATACTC	8445	False	NA	NA	False	AATAGA	-4	NA	72339378	72336713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339299
ES.28740.50	chr6	-	1610	4	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	-17	intron_retention	FALSE	canonical	3	875	junction_1	75.1546553596131	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTACTAAAATACTC	8447	False	NA	NA	False	AATAGA	-4	NA	72339376	72336713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.51	chr6	-	835	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTAGTTAACCTTGG	8448	False	NA	1	True	GATAAA	-25	NA	72339375	72337220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
ES.28740.52	chr6	-	863	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	40	531	1	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCGGAAATCTCTAGTTA	8448	False	NA	-6	True	GATAAA	-18	NA	72339375	72337227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.53	chr6	-	581	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	62	791	-5	-87	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCAGCTGCACGGCTC	8470	False	NA	NA	False	ATTAAA	-14	NA	72339353	72337487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ES.28740.54	chr6	-	4806	1	NIC	ENSMUSG00000073002.10	novel	623	3	NA	NA	4	-6579	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAAAAAACCCATCCTG	9587	False	NA	NA	False	NA	NA	NA	72357401	72352595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72352600_72357400
ES.28740.55	chr6	-	757	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	74	-11	74	11	multi-exon	FALSE	canonical	3	289	junction_1	0.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGTCTTTCAAGTG	8167	False	NA	-7	True	AATAAA	-36	NA	72367612	72362194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72362637_72365244_72365404_72367456
ES.28740.56	chr6	-	3366	2	FSM	ENSMUSG00000050732.10	ENSMUST00000142613.2	2076	2	-1293	3	-501	-3	multi-exon	FALSE	canonical	3	289	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTACGAGGCGCTTTA	7592	False	NA	-26	True	AATAAA	-17	NA	72368187	72362213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72362637_72365244
ES.28740.6	chr6	-	2642	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	-20	-378	-20	378	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTTTGTTTCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	72322187	72295282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.7	chr6	-	2364	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	1	-121	1	121	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGAAGGCTGACAGTGG	NA	False	NA	NA	False	NA	NA	NA	72322166	72295539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.8	chr6	-	2198	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	-21	67	-21	-67	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGGCTTGTTAAGGGTT	NA	False	NA	0	True	ATTAAA	-43	NA	72322188	72295727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28740.9	chr6	-	6049	13	NNC	ENSMUSG00000056305.5	novel	2244	13	NA	NA	32	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	183.599409191739	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTTGTTTCATATA	NA	False	NA	-24	True	ATTAAA	-19	NA	72322135	72295751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72296223_72296722_72296810_72298238_72299002_72299327_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ES.28741.1	chr6	+	180	1	Intergenic	novelGene_23893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACC	6405	False	NA	NA	False	NA	NA	NA	72373495	72373675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72373500_72373700
ES.28742.1	chr6	+	159	1	Intergenic	novelGene_23894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	72377510	72377669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72377500_72377700
ES.28743.1	chr6	+	175	1	Intergenic	novelGene_23895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTATTTATTTTA	267	False	NA	NA	False	NA	NA	NA	72390276	72390451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72390300_72390500
ES.28744.1	chr6	+	3306	14	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	-1	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.9274541528981	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTCACTACCTGGCT	1280	False	NA	3	True	NA	NA	NA	72391289	72407686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72395450_72395999_72396250_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.10	chr6	+	3005	15	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	47	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	20.397703952421	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACTACCTGGCTTA	1361	False	NA	5	True	NA	NA	NA	72391370	72407688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395218_72395450_72395999_72396250_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.11	chr6	+	3487	10	NIC	ENSMUSG00000053460.9	novel	569	5	NA	NA	1297	0	intron_retention	FALSE	canonical	1	5	junction_1	15.0923085635624	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCTGGCTTATTAATAG	404	False	NA	12	True	NA	NA	NA	72396185	72407695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72396250_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.12	chr6	+	6552	8	NIC	ENSMUSG00000053460.9	novel	2014	13	NA	NA	1783	-9	intron_retention	FALSE	canonical	3	38	junction_1	6.67618368317024	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTCACTACCTGGCT	890	False	NA	3	True	NA	NA	NA	72396671	72407686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72399478_72400916_72401024_72402768_72403610_72404024_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.13	chr6	+	4087	11	ISM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	6305	7	2707	-7	3prime_fragment	FALSE	canonical	3	31	junction_3	7.72010362624751	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACTACCTGGCTTA	1814	False	NA	5	True	NA	NA	NA	72397595	72407688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.14	chr6	+	3593	6	NNC	ENSMUSG00000053460.9	novel	2014	13	NA	NA	-785	-3	intron_retention	FALSE	canonical	0	0	junction_4	19.70786644972	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTACCTGGCTTATTAA	7033	False	NA	9	True	NA	NA	NA	72402814	72407692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72403610_72404024_72405611_72405779_72405911_72406115_72406264_72406432_72406623_72406949
ES.28744.15	chr6	+	3230	5	ISM	ENSMUSG00000053460.9	ENSMUST00000207012.2	2014	13	10699	-2405	1937	1935	3prime_fragment	FALSE	canonical	3	38	junction_4	6.74536878161602	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTGGTGCATGCACAGT	9755	False	NA	NA	False	AATAAA	-17	NA	72405536	72409630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.16	chr6	+	3384	1	Genic_Genomic	ENSMUSG00000053460.9	novel	NA	NA	NA	NA	3586	2874	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAGCTGAAAAGTGGA	NA	False	NA	NA	False	AATAAA	-22	NA	72407185	72410569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_72407200_72410600
ES.28744.2	chr6	+	3173	16	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	15.9016421234482	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACCTGGCTTATTAAT	1285	False	NA	10	True	NA	NA	NA	72391294	72407693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72395999_72396250_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.3	chr6	+	2924	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	5	0	5	0	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCTGGCTTATTAATAG	1286	False	NA	12	True	NA	NA	NA	72391295	72407695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.4	chr6	+	3582	14	NNC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_3	17.0637509836828	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACCTGGCTTATTAAT	1286	False	NA	10	True	NA	NA	NA	72391295	72407693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72391433_72391654_72391826_72394837_72394968_72395224_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406520_72406623_72406949
ES.28744.5	chr6	+	1219	5	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	5	-4438	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	19.7547462651384	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCCACCTCCAAGTTC	1286	False	NA	NA	False	ATTAAA	-17	NA	72391295	72396585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72395999
ES.28744.6	chr6	+	4287	12	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	5	-3	intron_retention	FALSE	canonical	1	1	junction_3	14.7676214952882	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTACCTGGCTTATTAA	1286	False	NA	9	True	NA	NA	NA	72391295	72407692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395218_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.7	chr6	+	5572	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	6	-2649	6	2649	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGTGCAGTGTGGAG	1287	False	NA	NA	False	AATAAA	-23	NA	72391296	72410344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.8	chr6	+	2958	15	NIC	ENSMUSG00000053460.9	novel	2929	15	NA	NA	-4	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	13.2472561656506	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACTACCTGGCTTA	1310	False	NA	5	True	NA	NA	NA	72391319	72407688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72391433_72391654_72391826_72394837_72394997_72395218_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28744.9	chr6	+	5368	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	69	-2508	36	2508	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTATGAAGGGATTTC	1350	False	NA	NA	False	AATAAA	-18	NA	72391359	72410203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ES.28745.1	chr6	+	1118	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	442	0	442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGGAGTCTGGAGCT	2105	False	NA	NA	False	AATAAA	-14	NA	72416475	72417593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72416500_72417600
ES.28746.1	chr6	-	2216	8	NNC	ENSMUSG00000053907.11	novel	576	5	NA	NA	-76	9676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	286.687414215183	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGTGTTGGGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	72416617	72400105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72401173_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.10	chr6	-	3858	5	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	3	intron_retention	FALSE	canonical	3	591	junction_1	100.30329007565	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411963_72413013_72413179_72414101_72414353_72414432_72416328
ES.28746.11	chr6	-	3483	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	-93	-3	-91	3	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416632	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.12	chr6	-	4322	4	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	783	junction_2	31.1555238547945	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.14	chr6	-	4699	3	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_1	45	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416541	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72414432_72416328
ES.28746.15	chr6	-	6095	4	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	761	junction_2	48.3206880009887	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399
ES.28746.16	chr6	-	6594	2	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_1	0	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416539	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179
ES.28746.17	chr6	-	4145	4	NIC	ENSMUSG00000053907.11	novel	576	5	NA	NA	1	3	intron_retention	FALSE	canonical	3	783	junction_1	27.7768888746662	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.18	chr6	-	5631	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_2	43.1530705744099	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416539	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977
ES.28746.19	chr6	-	3855	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_3	40.8642739919467	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416539	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72414101_72414353_72414432_72416328
ES.28746.2	chr6	-	13039	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	1	-9653	1	9653	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	72416538	72400128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.20	chr6	-	3811	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	761	junction_2	36.7956066218056	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.21	chr6	-	3276	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_4	312.788933094933	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413977_72414101_72414353_72414432_72416328
ES.28746.22	chr6	-	3148	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	3	intron_retention	FALSE	canonical	3	591	junction_1	91.1368019335036	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411963_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.23	chr6	-	3483	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_2	39.7481655761202	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416541	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.24	chr6	-	4107	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	3	intron_retention	FALSE	canonical	3	761	junction_3	44.6452685063042	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72414432_72416328
ES.28746.25	chr6	-	4203	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	-2	3	intron_retention	FALSE	canonical	3	761	junction_2	45.920447515241	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416543	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399_72414432_72416328
ES.28746.27	chr6	-	3060	8	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	591	junction_1	89.7599974535268	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416541	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.28	chr6	-	3466	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_3	41.5170647645841	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416539	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.29	chr6	-	4863	2	NIC	ENSMUSG00000053907.11	novel	762	3	NA	NA	1	3	intron_retention	FALSE	canonical	3	851	junction_1	0	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72414432_72416328
ES.28746.3	chr6	-	5783	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	1	-2397	1	2397	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGCTATAATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	72416538	72407384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.30	chr6	-	2818	9	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	271.304689187268	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414449_72416328
ES.28746.31	chr6	-	4018	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	787	junction_3	31.6265711072193	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413324_72413399_72414101_72414353_72414432_72416328
ES.28746.32	chr6	-	4438	3	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	851	junction_2	11.5	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72414432_72416328
ES.28746.33	chr6	-	3639	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	761	junction_3	43.9305006674052	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.34	chr6	-	3624	7	NNC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	376.00073876996	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72412098_72412194_72412363_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.35	chr6	-	3367	8	NNC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_1	286.340385427083	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72412079_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.36	chr6	-	2845	8	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_5	285.609480777869	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72411379_72411963_72412372_72412793_72413013_72413179_72413324_72413399_72413466_72413977_72414101_72414353_72414432_72416328
ES.28746.37	chr6	-	2650	10	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.077870224551	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72411172_72411322_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.38	chr6	-	2712	9	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	270.428710568978	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416541	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72411379_72411963_72412032_72412214_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.39	chr6	-	4617	4	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	761	junction_1	37.8182789431542	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72413324_72413399_72414432_72416328
ES.28746.4	chr6	-	7045	3	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	2352	intron_retention	FALSE	canonical	3	761	junction_1	45	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAGAAAAAATACAAA	NA	False	NA	NA	False	NA	NA	NA	72416538	72407429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72414432_72416328
ES.28746.40	chr6	-	3204	7	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	15	junction_1	294.030421706477	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416539	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.41	chr6	-	2815	9	NNC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	273.704876418013	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416537	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72411394_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.42	chr6	-	3807	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	761	junction_2	46.6281835374272	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416539	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413513_72413977_72414432_72416328
ES.28746.43	chr6	-	5399	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	315.54397474837	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416544	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72414834
ES.28746.45	chr6	-	3731	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	761	junction_2	43.4253382255107	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416539	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.46	chr6	-	4180	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	761	junction_3	44.6262254733694	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72414432_72416328
ES.28746.48	chr6	-	3385	8	NNC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	378	0	intron_retention	FALSE	canonical	1	16	junction_7	282.012013060089	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72415993	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72415784
ES.28746.49	chr6	-	3553	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	761	junction_2	41.7113893319319	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412372_72412793_72413013_72413179_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.5	chr6	-	4200	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	1	-2801	1	1055	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATAGATGCATACCAG	NA	False	NA	NA	False	NA	NA	NA	72416538	72408726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.50	chr6	-	3342	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	591	junction_1	97.6302548735107	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72414101_72414353_72414432_72416328
ES.28746.52	chr6	-	3975	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	761	junction_1	34.3620430126033	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416538	72409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.53	chr6	-	1784	10	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	261.077870224551	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTGTCTATTACTTG	NA	False	NA	-12	True	AATAAA	-16	NA	72416539	72409782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72410306_72411322_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.54	chr6	-	5195	5	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	594	-1	intron_retention	FALSE	canonical	3	761	junction_2	38.1141377968858	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTGTGTCTATTACTT	NA	False	NA	-13	True	AATAAA	-15	NA	72415777	72409783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72413013_72413179_72413324_72413399_72413513_72413977
ES.28746.55	chr6	-	4600	4	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	761	junction_2	45.2425561710309	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTGTGTCTATTACTT	NA	False	NA	-13	True	AATAAA	-15	NA	72416538	72409783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72412098_72412188_72413013_72413179_72414432_72416328
ES.28746.57	chr6	-	3843	6	NNC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	1	-3	intron_retention	FALSE	canonical	1	17	junction_4	312.841429481455	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAACTGTGTCTATTAC	NA	False	NA	-15	True	AATAAA	-13	NA	72416538	72409785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72413013_72413179_72413324_72413399_72413513_72413977_72414049_72414353_72414432_72416328
ES.28746.58	chr6	-	2878	10	NIC	ENSMUSG00000053907.11	novel	1400	9	NA	NA	0	-4	intron_retention	FALSE	canonical	1	6	junction_1	332.798162981635	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAACTGTGTCTATTA	NA	False	NA	-16	True	AATAAA	-12	NA	72416539	72409786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411641_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.6	chr6	-	2995	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	-101	-90	-101	90	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACGATAAAAGCTTAGT	NA	False	NA	79	True	AATAAA	-13	NA	72416642	72409691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.60	chr6	-	1901	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	2	901	0	200	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	72416539	72410682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.61	chr6	-	1595	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	2	1207	0	-106	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTTGTGCCCTATCAC	NA	False	NA	NA	False	NA	NA	NA	72416539	72410988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.62	chr6	-	1399	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	1	0	1	0	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	False	NA	NA	False	AATAAA	-25	NA	72416538	72411527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.63	chr6	-	1639	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	2	1746	2	0	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	False	NA	NA	False	AATAAA	-25	NA	72416537	72411527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.7	chr6	-	3317	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	1	3	intron_retention	FALSE	canonical	3	591	junction_1	83.0776076261762	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416538	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72411379_72411963_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28746.8	chr6	-	4158	5	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	3	intron_retention	FALSE	canonical	3	761	junction_1	33.537292675468	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416541	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
ES.28746.9	chr6	-	3961	6	NIC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	-56	3	intron_retention	FALSE	canonical	3	761	junction_1	31.4350123270216	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	False	NA	-8	True	AATAAA	-20	NA	72416597	72409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ES.28747.1	chr6	-	174	1	Intergenic	novelGene_23896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAGAAA	8502	False	NA	NA	False	NA	NA	NA	72431054	72430880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72430900_72431100
ES.28748.1	chr6	-	205	1	Intergenic	novelGene_23897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATGAGAATACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	72448929	72448724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72448700_72448900
ES.28749.1	chr6	-	295	1	Intergenic	novelGene_23898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGTCACTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	72450248	72449953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72450000_72450200
ES.2875.1	chr10	+	171	1	Intergenic	novelGene_2202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAAGTCTTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	60924643	60924814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60924600_60924800
ES.28750.1	chr6	-	582	3	NIC	ENSMUSG00000052631.16	novel	1239	11	NA	NA	3603	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCGCACACACACCTTT	NA	False	NA	NA	False	NA	NA	NA	72493395	72490625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72491025_72492208_72492368_72493371
ES.28751.1	chr6	+	146	1	Intergenic	novelGene_23899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATATAATAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72503134	72503280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72503100_72503300
ES.28752.1	chr6	+	1194	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	49	4	49	-2	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTCCTGTGTGGCTT	NA	False	NA	8	True	AATAAA	-19	NA	72521422	72539962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ES.28752.2	chr6	+	1273	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	128	-1	-31	1	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGTGTGGCTTGTCCC	NA	False	NA	13	True	AATAAA	-24	NA	72526383	72539967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ES.28752.3	chr6	+	1400	11	NIC	ENSMUSG00000056737.15	novel	1400	10	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	31.2680347959382	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTTCCTGTGTGGCT	NA	False	NA	7	True	AATAAA	-18	NA	72526389	72539961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72526485_72526712_72526852_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ES.28752.4	chr6	+	428	4	NNC	ENSMUSG00000056737.15	novel	1247	10	NA	NA	2358	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.0555074137902	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTCTCTTCCTGTGT	NA	False	NA	3	True	AATAAA	-14	NA	72535319	72539957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72535361_72535721_72535855_72538010_72538100_72539792
ES.28753.1	chr6	-	169	1	Intergenic	novelGene_23900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAGAAGGAGAAGA	7566	False	NA	NA	False	NA	NA	NA	72536770	72536601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72536600_72536800
ES.28754.1	chr6	+	2901	1	Antisense	novelGene_ENSMUSG00000056698.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72570908	72573809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_72570900_72573800
ES.28755.1	chr6	-	2199	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	-66	-11	4	-1	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTTCCAAGATGAAGT	NA	False	NA	0	True	AATAAA	-22	NA	72575392	72542905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ES.28755.2	chr6	-	2110	11	NIC	ENSMUSG00000056698.12	novel	2122	12	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	16.3783393541592	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGGTATTTTCTTCC	NA	False	NA	-10	True	AATAAA	-12	NA	72575383	72542915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72564593_72564669_72571722_72572004_72575304
ES.28755.3	chr6	-	4119	11	FSM	ENSMUSG00000056698.12	ENSMUST00000141833.8	2509	11	5	-1615	5	-1	multi-exon	FALSE	canonical	3	36	junction_10	7.7	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCTCTGGTATTTTCTT	NA	False	NA	-12	True	AATAAA	-10	NA	72575373	72542917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ES.28755.4	chr6	-	1544	11	FSM	ENSMUSG00000056698.12	ENSMUST00000141833.8	2509	11	-14	979	4	799	multi-exon	FALSE	canonical	3	36	junction_10	7.7	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCACCGTGCCAGGCT	NA	False	NA	NA	False	NA	NA	NA	72575392	72545511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ES.28755.5	chr6	-	2106	12	NIC	ENSMUSG00000056698.12	novel	2164	13	NA	NA	8	707	intron_retention	FALSE	canonical	2	5	junction_11	16.8415071664137	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGCCTGGAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	72575317	72545603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72573418_72573450_72574606
ES.28756.1	chr6	+	2066	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	26	935	26	48	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGTTAAGTCAAGAGT	NA	False	NA	19	True	TATAAA	-24	NA	72575483	72584473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.10	chr6	+	3049	11	NNC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	194.371911551026	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGTGACAATACCAA	NA	False	NA	NA	False	AATAAA	-25	NA	72575584	72585566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72575780_72577955_72578139_72578458_72578695_72579637_72579840_72580636_72580832_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.11	chr6	+	3696	9	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	45	intron_retention	FALSE	canonical	3	404	junction_1	60.0102855767243	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575584	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.12	chr6	+	4016	8	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	43	intron_retention	FALSE	canonical	3	404	junction_1	60.5191823190914	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTTGTTAAGTCA	NA	False	NA	14	True	TATAAA	-19	NA	72575585	72584468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72580835_72581848_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.13	chr6	+	4954	7	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	44	intron_retention	FALSE	canonical	3	404	junction_1	64.9863233474723	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGTGTTGTTAAGTCAA	NA	False	NA	15	True	TATAAA	-20	NA	72575585	72584469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72580835_72581848_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.15	chr6	+	6462	6	NIC	ENSMUSG00000056666.14	novel	1203	8	NA	NA	-25	42	intron_retention	FALSE	canonical	3	424	junction_2	61.2633658885961	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTAGTGTTGTTAAGTC	NA	False	NA	13	True	TATAAA	-18	NA	72575585	72584467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72580835_72581848_72581969_72582954_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.16	chr6	+	2281	10	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	45	intron_retention	FALSE	canonical	3	404	junction_1	56.0167523443646	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575585	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.17	chr6	+	4156	8	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	43	intron_retention	FALSE	canonical	3	404	junction_1	61.3534424295751	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTTGTTAAGTCA	NA	False	NA	14	True	TATAAA	-19	NA	72575585	72584468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72579840_72580636_72580835_72581848_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.19	chr6	+	1892	11	NNC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	151.552928048256	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575585	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72583023_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.2	chr6	+	2970	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	71	-14	71	14	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATTGATTTCTGTTC	NA	False	NA	NA	False	AATATA	-39	NA	72575528	72585422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.20	chr6	+	1759	10	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	45	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	154.838984468095	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575585	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72578701_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.22	chr6	+	5297	5	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	45	intron_retention	FALSE	canonical	3	404	junction_1	22.4652509445143	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575585	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72580835_72581848_72583478_72583555
ES.28756.23	chr6	+	4046	7	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-25	44	intron_retention	FALSE	canonical	3	404	junction_1	67.8546240134009	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGTGTTGTTAAGTCAA	NA	False	NA	15	True	TATAAA	-20	NA	72575585	72584469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72580835_72581848_72581969_72582954_72583723_72583856_72584017_72584224
ES.28756.24	chr6	+	1950	11	NNC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-23	45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	151.410732776775	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575587	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580826_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.25	chr6	+	4943	6	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	63	43	intron_retention	FALSE	canonical	3	404	junction_1	69.9182379640677	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTTGTTAAGTCA	NA	False	NA	14	True	TATAAA	-19	NA	72575673	72584468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72580835_72581848_72583723_72583856_72584017_72584224
ES.28756.27	chr6	+	951	2	NIC	ENSMUSG00000056666.14	novel	1203	8	NA	NA	-316	45	intron_retention	FALSE	canonical	3	568	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72583311	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72584017_72584224
ES.28756.3	chr6	+	3097	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	86	-156	-67	156	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAGGTGACAATACC	NA	False	NA	NA	False	AATAAA	-23	NA	72575543	72585564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.4	chr6	+	2236	10	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	45	intron_retention	FALSE	canonical	3	404	junction_1	57.2169361096675	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575584	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.5	chr6	+	1821	10	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	159.948448485253	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTTGTTAAGTCA	NA	False	NA	14	True	TATAAA	-19	NA	72575584	72584468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.8	chr6	+	1839	11	NNC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.932818288726	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTGTTAAGTCAAG	NA	False	NA	16	True	TATAAA	-21	NA	72575584	72584470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72575780_72577955_72578139_72578458_72578701_72579760_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ES.28756.9	chr6	+	5408	5	NIC	ENSMUSG00000056666.14	novel	3027	11	NA	NA	-26	43	intron_retention	FALSE	canonical	3	404	junction_1	59.8351903147303	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTGTTGTTAAGTCA	NA	False	NA	14	True	TATAAA	-19	NA	72575584	72584468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_72575780_72577955_72580835_72581848_72583478_72583555_72584017_72584224
ES.28757.1	chr6	+	4156	3	NNC	ENSMUSG00000092386.2	novel	406	2	NA	NA	253	-1515	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCACGAGATGGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	72587071	72591658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_72589236_72589452_72589722_72589935
ES.28757.2	chr6	+	174	1	Intergenic	novelGene_23901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72589232	72589406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72589200_72589400
ES.28757.3	chr6	+	207	1	Intergenic	novelGene_23902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCTGGAGATAGCTAAG	NA	False	NA	NA	False	AAAAAG	-5	NA	72589728	72589935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72589700_72589900
ES.28758.1	chr6	-	4924	1	FSM	ENSMUSG00000108368.2	ENSMUST00000206112.2	2499	1	-3521	1096	-3521	-1096	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTGTGTGTGTGTGGGG	NA	False	NA	NA	False	NA	NA	NA	72586006	72581082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72581100_72586000
ES.28758.10	chr6	-	6126	3	NIC	ENSMUSG00000056429.5	novel	5013	4	NA	NA	255	0	intron_retention	FALSE	canonical	3	270	junction_1	28.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATTGAAACATTACAT	4674	False	NA	-37	True	AATAAA	-12	NA	72593728	72585414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72589094_72591054_72593433_72593659
ES.28758.11	chr6	-	4662	5	NNC	ENSMUSG00000056429.5	novel	5013	4	NA	NA	257	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.715259464169	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATTGAAACATTACAT	4676	False	NA	-37	True	AATAAA	-12	NA	72593726	72585414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72585919_72586012_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.12	chr6	-	4711	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	250	52	250	-52	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTTCATGTCAT	4669	False	NA	-89	True	NA	NA	NA	72593733	72585466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.13	chr6	-	4346	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	231	436	231	-436	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAAAGCTGTAAAGAGAT	4650	False	NA	NA	False	NA	NA	NA	72593752	72585850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.14	chr6	-	6051	4	NNC	ENSMUSG00000056429.5	novel	5013	4	NA	NA	261	-458	intron_retention	TRUE	non_canonical	0	0	junction_1	129.164838696743	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4680	False	NA	NA	False	NA	NA	NA	72593722	72585872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72589222_72589438_72589715_72589928_72591139_72592506
ES.28758.15	chr6	-	2588	5	NNC	ENSMUSG00000056429.5	novel	5013	4	NA	NA	266	-2036	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.715259464169	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGACGCTCATGTTTTT	4685	False	NA	-2	True	AATAAA	-21	NA	72593717	72587450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72588816_72588938_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.16	chr6	-	2721	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	250	2042	250	-2042	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTCTGTGACGCTCAT	4669	False	NA	-8	True	AATAAA	-15	NA	72593733	72587456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.17	chr6	-	1741	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	213	3059	213	-3059	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTCTTGCATACAT	4632	False	NA	26	True	AGTAAA	-43	NA	72593770	72588473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.18	chr6	-	857	3	ISM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	883	3500	883	-3500	3prime_fragment	FALSE	canonical	3	270	junction_1	2	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACTTTTGTGTTCCTTG	5302	False	NA	NA	False	NA	NA	NA	72593100	72588914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_72589094_72591054_72591139_72592506
ES.28758.2	chr6	-	7130	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	250	-2367	250	2367	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTCAGGTCCTCCTTG	4669	False	NA	NA	False	AATAAA	-19	NA	72593733	72583047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.3	chr6	-	5694	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	255	-936	255	936	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACTAATCAGAAACAAAAT	4674	False	NA	NA	False	NA	NA	NA	72593728	72584478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.4	chr6	-	5209	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	261	-457	261	457	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCACAGAGCTCTGTCT	4680	False	NA	NA	False	NA	NA	NA	72593722	72584957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.5	chr6	-	1881	1	Genic_Genomic	ENSMUSG00000056429.5	novel	NA	NA	NA	NA	7034	346	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATACTCAGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	72586949	72585068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_72585100_72586900
ES.28758.6	chr6	-	4882	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	201	-70	201	70	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGTTTTTAATTTTT	4620	False	NA	33	True	ACTAAA	-22	NA	72593782	72585344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ES.28758.8	chr6	-	3944	5	NNC	ENSMUSG00000056429.5	novel	5013	4	NA	NA	299	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.715259464169	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACATTACATGTATTA	4718	False	NA	-31	True	AATAAA	-18	NA	72593684	72585408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72587200_72587975_72589094_72591054_72591139_72592506_72593433_72593659
ES.28759.1	chr6	+	209	1	Intergenic	novelGene_23904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGAAAGAAAGAAAGAA	6906	False	NA	NA	False	NA	NA	NA	72643282	72643491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72643300_72643500
ES.2876.1	chr10	+	807	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	-19	1	9	-1	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGCTTCTAGAACCTT	NA	False	NA	5	True	AATAAA	-16	NA	60925118	60930102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
ES.28760.1	chr6	+	176	1	Intergenic	novelGene_23906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72692660	72692836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72692700_72692800
ES.28761.2	chr6	+	1896	2	Antisense	novelGene_ENSMUSG00000055799.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTAGCAGCCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	72710896	72712836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_72711156_72711199
ES.28762.1	chr6	+	188	1	Intergenic	novelGene_23907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGTAAGTTCAGGTG	NA	False	NA	NA	False	NA	NA	NA	72733674	72733862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72733700_72733900
ES.28763.1	chr6	+	7004	1	Intergenic	novelGene_23909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGCTGGTAGGCTGTAG	9424	False	NA	NA	False	NA	NA	NA	72753463	72760467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72753500_72760500
ES.28764.1	chr6	+	176	1	Intergenic	novelGene_23910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAC	NA	False	NA	NA	False	NA	NA	NA	72763057	72763233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72763100_72763200
ES.28765.1	chr6	-	1244	2	Intergenic	novelGene_23903	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACAAAAAAAAAACAA	5644	False	NA	NA	False	NA	NA	NA	72605758	72597639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72598463_72605337
ES.28765.11	chr6	-	2988	13	NNC	ENSMUSG00000055799.14	novel	1888	13	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	134.305828449683	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4862	False	NA	-8	True	AATAAA	-14	NA	72766198	72603360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765749
ES.28765.12	chr6	-	2823	13	NNC	ENSMUSG00000055799.14	novel	1888	13	NA	NA	41	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	121.658989483812	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTCTCTGGATGTTTC	4864	False	NA	-9	True	AATAAA	-13	NA	72766196	72603361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692_72765927_72766103
ES.28765.13	chr6	-	3050	13	NNC	ENSMUSG00000055799.14	novel	1888	13	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	132.765535814081	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTCTCTGGATGTTT	4849	False	NA	-10	True	AATAAA	-12	NA	72766211	72603362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609915_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.14	chr6	-	2801	12	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.064114746054	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTCTCTGGATGTTT	5054	False	NA	-10	True	AATAAA	-12	NA	72766006	72603362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72608002_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.15	chr6	-	6350	8	ISM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	150891	2	-8093	-2	3prime_fragment	FALSE	canonical	3	352	junction_2	31.2122424960568	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTCTCTGGATGTTT	1394	False	NA	-10	True	AATAAA	-12	NA	72615346	72603362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082
ES.28765.17	chr6	-	2435	10	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	55083	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.720617170033	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCGTCTCTGGATGT	NA	False	NA	-12	True	AATAAA	-10	NA	72710498	72603364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72710364
ES.28765.18	chr6	-	2478	13	NNC	ENSMUSG00000055799.14	novel	1888	13	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.652995595776	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCGTCTCTGGATGT	4870	False	NA	-12	True	AATAAA	-10	NA	72766190	72603364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72603918_72604433_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610305_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.19	chr6	-	2287	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-274	-125	28	125	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAAACATAAACAAAAC	4851	False	NA	NA	False	NA	NA	NA	72766209	72604129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.2	chr6	-	3032	12	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	9	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	127.052601848068	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATGTTTCTTTAGGCC	4832	False	NA	-1	True	AATAAA	-21	NA	72766228	72603353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608946_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.20	chr6	-	2265	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	8	769	8	125	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAAACATAAACAAAAC	4831	False	NA	NA	False	NA	NA	NA	72766229	72604129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.21	chr6	-	1052	6	NNC	ENSMUSG00000055799.14	novel	713	3	NA	NA	27	830	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	171.354603089616	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAACTCCCCTGCTGC	4850	False	NA	NA	False	AATACA	-7	NA	72766210	72624967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72625184_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.22	chr6	-	178	1	Intergenic	novelGene_23905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCTAGACAGC	NA	False	NA	NA	False	NA	NA	NA	72678933	72678755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72678800_72678900
ES.28765.23	chr6	-	4102	1	Intergenic	novelGene_23908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCGCACAGCAGATGTAG	NA	False	NA	NA	False	NA	NA	NA	72756539	72752437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72752400_72756500
ES.28765.3	chr6	-	3423	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	-374	-7	-374	7	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATGTTTCTTTAGGCC	4449	False	NA	-1	True	AATAAA	-21	NA	72766611	72603353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.4	chr6	-	3454	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-665	-901	-363	7	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGATGTTTCTTTAGGCC	4460	False	NA	-1	True	AATAAA	-21	NA	72766600	72603353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ES.28765.6	chr6	-	2910	11	NIC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	49	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	122.761598230065	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTCTCTGGATGTTTCTT	4872	False	NA	-7	True	AATAAA	-15	NA	72766188	72603359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72765193_72765322_72765544_72765609_72765692
ES.28765.7	chr6	-	2870	13	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	121.658989483812	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4865	False	NA	-8	True	AATAAA	-14	NA	72766195	72603360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692_72765842_72765971
ES.28765.9	chr6	-	2902	13	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	121.658989483812	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4880	False	NA	-8	True	AATAAA	-14	NA	72766180	72603360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692_72765935_72766017
ES.28766.1	chr6	+	176	2	Intergenic	novelGene_23911	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	72768776	72804342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72768816_72804205
ES.28766.2	chr6	+	158	1	Intergenic	novelGene_23912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72768983	72769141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72769000_72769100
ES.28766.3	chr6	+	182	1	Intergenic	novelGene_23915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGACTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	72791064	72791246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72791100_72791200
ES.28766.4	chr6	+	177	1	Intergenic	novelGene_23917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	72804165	72804342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72804200_72804300
ES.28767.1	chr6	+	3954	1	Intergenic	novelGene_23918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCATTAGAGATGTTAA	NA	False	NA	NA	False	NA	NA	NA	72814058	72818012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72814100_72818000
ES.28768.1	chr6	+	176	1	Intergenic	novelGene_23919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	72822778	72822954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72822800_72823000
ES.28769.1	chr6	+	2803	1	Intergenic	novelGene_23923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAGAAGAGAAGAG	5249	False	NA	NA	False	AAGAAA	-40	NA	72859637	72862440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72859600_72862400
ES.2877.1	chr10	-	4027	1	Antisense	novelGene_ENSMUSG00000020098.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTCTCCTCCAATGACT	5981	False	NA	NA	False	ATTAAA	-33	NA	60932151	60928124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_60928100_60932200
ES.28770.1	chr6	+	192	1	Intergenic	novelGene_23924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGTACAATAAATCATG	NA	False	NA	NA	False	NA	NA	NA	72865073	72865265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72865100_72865300
ES.28771.1	chr6	+	2328	1	Intergenic	novelGene_23925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGGCAAGTGTCCAAG	NA	False	NA	NA	False	NA	NA	NA	72877026	72879354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72877000_72879400
ES.28772.1	chr6	+	131	1	Intergenic	novelGene_23927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATTTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	72883654	72883785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72883700_72883800
ES.28773.1	chr6	+	2523	4	Intergenic	novelGene_23931	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGATTCCTCTTTGCT	2205	False	NA	NA	False	AATAAA	-30	NA	72902289	72915899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72902447_72903853_72903942_72908189_72908307_72913738
ES.28774.1	chr6	-	220	1	Intergenic	novelGene_23913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTCTTTGTTTG	7157	False	NA	NA	False	ATTAAA	-6	NA	72782094	72781874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72781900_72782100
ES.28774.11	chr6	-	3112	7	FSM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	85	-1454	85	-1	multi-exon	FALSE	canonical	3	65	junction_6	409.390196918946	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCACTCGAATTTCTTTG	9237	False	NA	-10	True	AATAAA	-17	NA	72876190	72818097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72875962
ES.28774.12	chr6	-	3226	7	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	433.428739497304	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCACTCGAATTTCTTT	9094	False	NA	-11	True	AATAAA	-16	NA	72876333	72818098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72875990
ES.28774.14	chr6	-	2627	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	-50	674	-50	-674	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCCTATGTTATCAATC	8415	False	NA	0	True	AGTAAA	-26	NA	72877012	72818770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.15	chr6	-	2402	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	0	849	0	606	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATACTTTGTGCCGTTT	8465	False	NA	NA	False	TTTAAA	-14	NA	72876962	72818945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.16	chr6	-	2022	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	-86	1315	-86	140	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATTTAAAAA	8379	False	NA	56	True	NA	NA	NA	72877048	72819411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.18	chr6	-	1888	7	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	4192	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	433.428739497304	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	NA	False	NA	-26	True	AATAAA	-22	NA	72871874	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72871474
ES.28774.19	chr6	-	1503	5	NIC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	43	58	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	505.842119638134	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8508	False	NA	-26	True	AATAAA	-22	NA	72876919	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72876596
ES.28774.2	chr6	-	175	2	Intergenic	novelGene_23914	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	72940933	72781913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72781923_72940767
ES.28774.21	chr6	-	1455	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	44	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	404.082331477442	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8509	False	NA	-26	True	AATAAA	-22	NA	72876918	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72819663_72820017_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.22	chr6	-	1608	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	51	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	404.082331477442	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8516	False	NA	-26	True	AATAAA	-22	NA	72876911	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596_72876636_72876830
ES.28774.23	chr6	-	1825	7	FSM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	-24	-58	-24	58	multi-exon	FALSE	canonical	3	65	junction_6	409.390196918946	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	9128	False	NA	-26	True	AATAAA	-22	NA	72876299	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72875962
ES.28774.24	chr6	-	1476	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-32	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.082331477442	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8709	False	NA	-26	True	AATAAA	-22	NA	72876718	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72819822_72819955_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.25	chr6	-	3399	6	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-44	58	intron_retention	FALSE	canonical	0	0	junction_1	554.479792237733	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTGCATGAGGTTTTT	8697	False	NA	-26	True	AATAAA	-22	NA	72876730	72819493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72824661_72824739_72825207_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.27	chr6	-	1810	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-42	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	517.641314630358	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACTACTGCATGAGGTT	8699	False	NA	-29	True	AATAAA	-19	NA	72876728	72819496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838384_72838578_72838740_72838909_72876596
ES.28774.28	chr6	-	1668	7	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-84	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	423.275980366894	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAACTACTGCATGAGGT	8657	False	NA	-30	True	AATAAA	-18	NA	72876770	72819497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826612_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.3	chr6	-	82	1	Intergenic	novelGene_23916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACGAAACGAAAA	NA	False	NA	NA	False	NA	NA	NA	72801294	72801212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72801200_72801300
ES.28774.32	chr6	-	3505	5	NIC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	44	53	intron_retention	FALSE	canonical	3	1098	junction_4	36.792492440714	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTAACTACTGCATGAGG	8509	False	NA	-31	True	AATAAA	-17	NA	72876918	72819498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72820114_72825207_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.34	chr6	-	1617	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	-57	1691	-57	180	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGGGTTTGTGTGGTGA	8408	False	NA	-8	True	AATGAA	-15	NA	72877019	72819787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.35	chr6	-	3856	1	NIC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	-4508	-10103	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAATATCTCTTTCCCA	2488	False	NA	NA	False	NA	NA	NA	72840385	72836529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72836500_72840400
ES.28774.36	chr6	-	2418	2	ISM	ENSMUSG00000055239.11	ENSMUST00000206378.2	544	4	-34	16647	-34	-10188	5prime_fragment	FALSE	canonical	3	1098	junction_1	0	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGAGT	8707	False	NA	NA	False	NA	NA	NA	72876720	72836614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_72838909_72876596
ES.28774.37	chr6	-	147	1	Intergenic	novelGene_23920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	609	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAGTAGATTTTTT	7107	False	NA	NA	False	NA	NA	NA	72844171	72844024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72844000_72844200
ES.28774.38	chr6	-	6902	1	Intergenic	novelGene_23921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	613	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	72858883	72851981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72852000_72858900
ES.28774.39	chr6	-	227	1	Intergenic	novelGene_23922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTACTAATTTATTATA	NA	False	NA	NA	False	TTTAAA	-9	NA	72857971	72857744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72857700_72858000
ES.28774.4	chr6	-	3514	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	226	-489	-50	489	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTGTCCTTTTTCTTT	8691	False	NA	0	True	TATAAA	-21	NA	72876736	72817607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.40	chr6	-	3947	1	FSM	ENSMUSG00000107610.2	ENSMUST00000205107.2	958	1	-481	-2508	-481	2508	mono-exon	FALSE	NA	NA	NA	NA	NA	608	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGTCCTGATTCAAAC	NA	False	NA	NA	False	NA	NA	NA	72873383	72869436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72869400_72873400
ES.28774.41	chr6	-	5394	2	Genic_Genomic	ENSMUSG00000107610.2	novel	958	1	NA	NA	-2119	2505	multi-exon	FALSE	non_canonical	0	0	junction_1	0	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTTGTCCTGATTCA	NA	False	NA	NA	False	NA	NA	NA	72875021	72869439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_72869529_72869716
ES.28774.42	chr6	-	3292	1	FSM	ENSMUSG00000107610.2	ENSMUST00000205107.2	958	1	0	-2334	0	2334	mono-exon	FALSE	NA	NA	NA	NA	NA	608	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72872902	72869610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72869600_72872900
ES.28774.43	chr6	-	178	1	Intergenic	novelGene_23926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	2028	False	NA	NA	False	NA	NA	NA	72883399	72883221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72883200_72883400
ES.28774.44	chr6	-	221	1	Intergenic	novelGene_23928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATAACCTCATGTTCTAA	NA	False	NA	0	True	AAAACA	-25	NA	72888012	72887791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72887800_72888000
ES.28774.45	chr6	-	370	1	Intergenic	novelGene_23929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATGAAGTC	5821	False	NA	NA	False	NA	NA	NA	72894352	72893982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72894000_72894400
ES.28774.46	chr6	-	159	1	Intergenic	novelGene_23930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAAAATAAATAATTCTG	5819	False	NA	NA	False	NA	NA	NA	72894354	72894195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72894200_72894400
ES.28774.47	chr6	-	181	1	Intergenic	novelGene_23932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	72912571	72912390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72912400_72912600
ES.28774.48	chr6	-	256	1	Intergenic	novelGene_23933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	72920428	72920172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72920200_72920400
ES.28774.49	chr6	-	913	1	Antisense	novelGene_ENSMUSG00000097569.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATTACTTTCCTGAAG	NA	False	NA	NA	False	NA	NA	NA	72931854	72930941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_72930900_72931900
ES.28774.5	chr6	-	3749	1	Genic_Genomic	ENSMUSG00000055239.11	novel	NA	NA	NA	NA	5037	486	mono-exon	FALSE	NA	NA	NA	NA	NA	651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTTGTGTCCTTTTTC	NA	False	NA	-3	True	TATAAA	-18	NA	72821359	72817610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_72817600_72821400
ES.28774.50	chr6	-	569	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	17	-16	17	16	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGAGTATGCGTGGG	NA	False	NA	5	True	AATAAA	-36	NA	72935454	72934313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72934636_72934895_72935008_72935319
ES.28774.51	chr6	-	740	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	0	-307	0	-1	multi-exon	FALSE	canonical	3	27215	junction_1	0	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGGTCTGAATTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	72935382	72934330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72935008_72935319
ES.28774.54	chr6	-	502	4	NNC	ENSMUSG00000079523.9	novel	623	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12828.8026547903	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935382	72934335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72934636_72934698_72934726_72934895_72935008_72935319
ES.28774.55	chr6	-	1047	1	NIC	ENSMUSG00000079523.9	novel	570	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935382	72934335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72934300_72935400
ES.28774.57	chr6	-	179	1	Intergenic	novelGene_23934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	72940935	72940756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_72940800_72940900
ES.28774.6	chr6	-	3345	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	-83	-11	-83	11	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGGTGTTGAATTAA	8382	False	NA	2	True	AATAAA	-29	NA	72877045	72818085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ES.28774.7	chr6	-	2971	5	NIC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	12	9	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	495.76733454313	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTTGGTGTTGAATT	8477	False	NA	0	True	AATAAA	-27	NA	72876950	72818087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_72820114_72825207_72825491_72835756_72835897_72838740_72838909_72876596
ES.28774.8	chr6	-	3004	8	NNC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	48	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	404.082331477442	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCGAATTTCTTTGGTG	8513	False	NA	-7	True	AATAAA	-20	NA	72876914	72818094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596_72876637_72876837
ES.28775.1	chr6	+	156	1	Intergenic	novelGene_23935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	72943523	72943679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72943500_72943700
ES.28776.1	chr6	+	157	1	Intergenic	novelGene_23936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72992109	72992266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_72992100_72992300
ES.28777.1	chr6	+	175	1	Intergenic	novelGene_23937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATAATTCCCTATGGA	NA	False	NA	NA	False	NA	NA	NA	73168021	73168196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_73168000_73168200
ES.28778.1	chr6	-	6096	30	ISM	ENSMUSG00000052861.14	ENSMUST00000064948.13	12652	77	-562	123840	-542	-57268	5prime_fragment	TRUE	canonical	0	0	junction_1	0.377739694831149	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGGTTTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	73199176	73118428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_73119382_73120992_73121155_73121642_73121799_73121883_73122010_73126079_73126191_73126380_73126546_73128473_73128694_73129651_73129749_73132237_73132419_73133323_73133444_73135125_73135219_73136068_73136282_73137846_73137991_73140462_73140577_73145811_73145941_73150292_73150545_73155396_73155550_73156691_73156844_73158689_73158811_73165312_73165514_73167316_73167434_73168448_73168618_73169295_73169423_73169675_73169797_73169882_73170018_73172535_73172804_73182674_73182938_73185529_73185692_73189418_73189655_73198541
ES.28779.1	chr6	+	180	1	Intergenic	novelGene_23938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTTCACACTGG	1456	False	NA	NA	False	NA	NA	NA	73224505	73224685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_73224500_73224700
ES.2878.1	chr10	+	5862	4	Antisense	novelGene_ENSMUSG00000020097.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAAGTATTTAAGACC	3602	False	NA	NA	False	NA	NA	NA	60936695	60944782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_60936787_60937458_60940392_60941200_60941299_60942042
ES.28780.1	chr6	+	1450	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	64	5	64	2	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTGTGAAGACTTTT	2379	False	NA	14	True	AATAAA	-18	NA	73225428	73253889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28780.10	chr6	+	1217	9	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	492.972726806463	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTGGCTGTGAAGACT	2603	False	NA	11	True	AATAAA	-15	NA	73225652	73253886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246376_73247953_73248106_73252183_73252373_73253664
ES.28780.11	chr6	+	8445	9	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	2	3	intron_retention	FALSE	non_canonical	0	0	junction_1	495.88935257777	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGAAGACTTTTT	2603	False	NA	15	True	AATAAA	-19	NA	73225652	73253890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73232892_73233090_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28780.12	chr6	+	1213	9	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	8	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	496.015735007469	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2609	False	NA	13	True	AATAAA	-17	NA	73225658	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73225737_73233153_73233252_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28780.13	chr6	+	1131	10	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	468.017120083612	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2609	False	NA	13	True	AATAAA	-17	NA	73225658	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664_73253720_73253807
ES.28780.14	chr6	+	2291	3	FSM	ENSMUSG00000052738.15	ENSMUST00000127660.2	2767	3	19	457	19	-457	multi-exon	FALSE	canonical	3	1222	junction_2	56.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCCCAAAGGAAGCAG	2620	False	NA	NA	False	NA	NA	NA	73225669	73239577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_73225737_73233153_73233258_73237457
ES.28780.16	chr6	+	6128	1	NIC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	-3938	-502	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTACAACAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	73233404	73239532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_73233400_73239500
ES.28780.17	chr6	+	188	1	ISM	ENSMUSG00000052738.15	ENSMUST00000127660.2	2767	3	14196	0	2504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	73239846	73240034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_73239800_73240000
ES.28780.18	chr6	+	2492	5	NIC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	3448	1	intron_retention	FALSE	canonical	3	1431	junction_3	96.7041234901594	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	NA	False	NA	13	True	AATAAA	-17	NA	73240790	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_73241004_73241212_73241271_73246297_73248106_73252183_73252373_73253664
ES.28780.19	chr6	+	5230	1	NIC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	8097	-3218	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAGGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	73245439	73250669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_73245400_73250700
ES.28780.5	chr6	+	4459	8	NIC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	1222	junction_2	137.882677131905	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2585	False	NA	13	True	AATAAA	-17	NA	73225634	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_73225737_73233153_73233258_73237457_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28780.6	chr6	+	6471	3	NNC	ENSMUSG00000052738.15	novel	2767	3	NA	NA	1	-457	intron_retention	TRUE	non_canonical	0	0	junction_2	667.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCCCAAAGGAAGCAG	2586	False	NA	NA	False	NA	NA	NA	73225635	73239577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73225737_73233153_73236978_73237031
ES.28780.7	chr6	+	1021	7	NIC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	571.579803896378	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2586	False	NA	13	True	AATAAA	-17	NA	73225635	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_73225737_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28780.9	chr6	+	1392	10	NNC	ENSMUSG00000052738.15	novel	1519	9	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	611.053633660644	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	2598	False	NA	13	True	AATAAA	-17	NA	73225647	73253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_73225737_73226204_73226367_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ES.28781.1	chr6	-	222	1	Intergenic	novelGene_23939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACCACTAAATCACAACC	NA	False	NA	NA	False	NA	NA	NA	73965316	73965094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_73965100_73965300
ES.28782.1	chr6	+	222	1	Intergenic	novelGene_23940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTACCATTAATGTTA	NA	False	NA	NA	False	NA	NA	NA	74855535	74855757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_74855500_74855800
ES.28783.1	chr6	+	217	1	Intergenic	novelGene_23941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTACTGTCATTTATT	NA	False	NA	NA	False	AAAAAG	-24	NA	75862844	75863061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_75862800_75863100
ES.28784.1	chr6	+	174	1	Intergenic	novelGene_23942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	75951357	75951531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_75951400_75951500
ES.28785.1	chr6	-	845	1	FSM	ENSMUSG00000072476.7	ENSMUST00000097218.7	2353	1	1470	38	1470	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	76473297	76472452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_76472500_76473300
ES.28786.1	chr6	+	199	1	Intergenic	novelGene_23943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAATGTCTAAACCCTGG	NA	False	NA	NA	False	NA	NA	NA	77147860	77148059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_77147900_77148100
ES.28787.1	chr6	+	178	1	Intergenic	novelGene_23944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77352611	77352789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_77352600_77352800
ES.28788.1	chr6	+	806	3	Intergenic	novelGene_23945	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTAACATTCTTTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	78818579	78847532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_78818671_78833904_78833986_78846898
ES.28788.2	chr6	+	4653	1	Intergenic	novelGene_23946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTCATGTGACTTTGAA	NA	False	NA	NA	False	AATAAA	-13	NA	78842759	78847412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_78842800_78847400
ES.28789.1	chr6	+	196	1	Intergenic	novelGene_23947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTCTGATTAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	79206457	79206653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_79206500_79206700
ES.2879.1	chr10	+	174	1	Intergenic	novelGene_2203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAGAATGTCA	NA	False	NA	NA	False	NA	NA	NA	60969021	60969195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60969000_60969200
ES.28790.1	chr6	+	4898	1	Intergenic	novelGene_23948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCGTGTAATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	79608116	79613014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_79608100_79613000
ES.28791.1	chr6	+	174	1	Intergenic	novelGene_23949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAAACTGAGCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	81202825	81202999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_81202800_81203000
ES.28792.1	chr6	+	3406	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-33	819	-33	-160	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGCCTTGGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	81900616	81936077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.10	chr6	+	4880	16	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-4	-305	intron_retention	FALSE	canonical	3	20	junction_9	11.9524985765413	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGATGATCCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	81900645	81935932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.11	chr6	+	2637	17	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-4	380	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	11.5805602196094	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTCAAAATCTGTACT	NA	False	NA	NA	False	ATTAAA	-26	NA	81900645	81935423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.12	chr6	+	1205	3	ISM	ENSMUSG00000035125.11	ENSMUST00000132301.2	2429	8	-14	12749	-3	303	5prime_fragment	FALSE	canonical	3	58	junction_1	4.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTTTAATTGCAAAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	81900646	81908451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81900920_81902746_81902876_81907648
ES.28792.13	chr6	+	2845	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-3	1350	-3	503	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTGTGGTCATGTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	81900646	81935546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.15	chr6	+	6408	15	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-3	-303	intron_retention	FALSE	canonical	3	20	junction_9	12.3717914826348	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGATCCTGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	81900646	81935934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.16	chr6	+	3724	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-3	471	-3	188	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATGGTTTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	81900646	81936425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.17	chr6	+	4380	9	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	20.7228738354505	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-8	NA	81900647	81920705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409
ES.28792.18	chr6	+	4760	18	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-2	470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.004825466272	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	81900647	81935513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.19	chr6	+	6457	6	NIC	ENSMUSG00000035125.11	novel	2429	8	NA	NA	-2	29	intron_retention	FALSE	canonical	3	46	junction_5	8.61162005664439	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGGAAAAAACCTTGAGA	NA	False	NA	NA	False	AATAAA	-37	NA	81900647	81920734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81913003_81916360_81916548_81918298
ES.28792.2	chr6	+	10068	15	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	-28	3097	intron_retention	FALSE	non_canonical	0	0	junction_14	16.2907260458839	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCAGGTGATTTCCC	NA	False	NA	NA	False	NA	NA	NA	81900621	81939993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81921502_81923443_81923595_81925243_81925363_81926889_81928768_81930254_81930402_81933811_81933937_81934934_81938559_81938738
ES.28792.20	chr6	+	5318	18	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	0	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.004825466272	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGCCTTGGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	81900653	81936077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.21	chr6	+	2704	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	6	1482	2	371	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAACTGTCCTTTCAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	81900655	81935414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.22	chr6	+	1550	9	ISM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	6	16162	2	29	5prime_fragment	FALSE	canonical	3	41	junction_4	10.4155832769941	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGGAAAAAACCTTGAGA	NA	False	NA	NA	False	AATAAA	-37	NA	81900655	81920734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409
ES.28792.23	chr6	+	3529	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	6	657	2	2	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACTGCCCTTTTAGAGT	NA	False	NA	NA	False	TTTAAA	-18	NA	81900655	81936239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.24	chr6	+	2282	12	ISM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	10	11056	-1	4640	5prime_fragment	FALSE	canonical	3	32	junction_9	11.481209945741	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATGTGTATGTAGTAC	NA	False	NA	NA	False	ATTAAA	-15	NA	81900659	81925840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243
ES.28792.25	chr6	+	4891	17	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-1	470	intron_retention	FALSE	canonical	3	8	junction_4	15.5149877134982	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	81900659	81935513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.26	chr6	+	3276	17	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-1	-161	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	11.5805602196094	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTGGCCTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	81900659	81936076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.27	chr6	+	5302	17	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	1	-308	intron_retention	FALSE	canonical	0	0	junction_9	18.3693656327593	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAATGATGATCCTGTA	NA	False	NA	NA	False	NA	NA	NA	81900661	81935929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921390_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.28	chr6	+	2785	17	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	2	470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	19.5891392102869	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	81900662	81935513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921508_81923456_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934938
ES.28792.29	chr6	+	2518	17	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	4	444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3907194296653	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGATTCATTGTCAA	NA	False	NA	NA	False	NA	NA	NA	81900664	81935487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900766_81902753_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921390_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.3	chr6	+	2749	17	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	-20	494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.7716864586511	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTTATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	81900629	81935537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81912915_81916376_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.30	chr6	+	6260	16	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	4	-163	intron_retention	FALSE	canonical	0	0	junction_8	15.6778683358279	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTCTGGCCTTGGCTT	NA	False	NA	NA	False	TATAAA	-44	NA	81900664	81936074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921390_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.31	chr6	+	6436	16	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	5	494	intron_retention	FALSE	canonical	3	8	junction_4	16.0174904401407	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTTATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	81900665	81935537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.32	chr6	+	5165	18	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	5	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.004825466272	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCCTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	81900665	81935936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.33	chr6	+	5869	15	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	12	378	intron_retention	FALSE	canonical	3	20	junction_9	12.3717914826348	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCTTTCAAAATCTGTA	NA	False	NA	NA	False	ATTAAA	-24	NA	81900672	81935421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.34	chr6	+	3224	16	NIC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	12	-161	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	16.2639341967298	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTGGCCTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	81900672	81936076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81934934
ES.28792.35	chr6	+	5400	17	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	18	-193	intron_retention	FALSE	canonical	0	0	junction_9	18.3693656327593	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGCTGTTAAAGGGCA	NA	False	NA	NA	False	TATAAA	-14	NA	81900678	81936044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921390_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.36	chr6	+	3028	15	NIC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	18	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	16.2770967175053	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTCTGGCCTTGGCTT	NA	False	NA	NA	False	TATAAA	-44	NA	81900678	81936074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.37	chr6	+	7218	14	NIC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	2084	-163	intron_retention	FALSE	canonical	1	2	junction_4	19.7283324331205	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTCTGGCCTTGGCTT	NA	False	NA	NA	False	TATAAA	-44	NA	81902744	81936074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_81902876_81907648_81907874_81909794_81909893_81910708_81910785_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81921502_81923443_81923595_81925243_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.38	chr6	+	5227	15	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	11	494	intron_retention	FALSE	canonical	0	0	junction_2	16.0197582085756	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTTATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	81907706	81935537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81907874_81909794_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.39	chr6	+	7286	2	ISM	ENSMUSG00000035125.11	ENSMUST00000132301.2	2429	8	9430	466	241	29	intron_retention	FALSE	canonical	3	59	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGGAAAAAACCTTGAGA	NA	False	NA	NA	False	AATAAA	-37	NA	81910090	81920734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81913003_81916360
ES.28792.4	chr6	+	3237	17	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	-18	-301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	15.3617829368859	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCCTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	81900631	81935936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920524_81921315_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.40	chr6	+	3270	13	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	2193	-303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.8033974739237	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGATCCTGTATTTAT	92	False	NA	NA	False	NA	NA	NA	81912042	81935934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930406_81933811_81933937_81934934
ES.28792.41	chr6	+	1468	9	ISM	ENSMUSG00000035125.11	ENSMUST00000152996.8	3519	18	19754	750	2073	444	3prime_fragment	FALSE	canonical	3	20	junction_1	11.9052246933857	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTGATTCATTGTCAA	8457	False	NA	NA	False	NA	NA	NA	81920407	81935487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.42	chr6	+	5297	7	NNC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	2161	-166	intron_retention	FALSE	canonical	1	1	junction_1	20.1246117974981	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTCTCTGGCCTTGG	8545	False	NA	NA	False	TATAAA	-41	NA	81920495	81936071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81920523_81921315_81921502_81923443_81923595_81925243_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.5	chr6	+	5543	17	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-9	-163	intron_retention	FALSE	canonical	1	1	junction_9	18.2067123611046	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTCTGGCCTTGGCTT	NA	False	NA	NA	False	TATAAA	-44	NA	81900640	81936074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921315_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.6	chr6	+	5220	6	ISM	ENSMUSG00000035125.11	ENSMUST00000132301.2	2429	8	-20	467	-9	28	intron_retention	FALSE	canonical	3	41	junction_4	10.3227903204512	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTGGAAAAAACCTTGAG	NA	False	NA	NA	False	AATAAA	-36	NA	81900640	81920733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360
ES.28792.7	chr6	+	3236	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-4	960	-4	-301	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCCTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	81900645	81935936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.8	chr6	+	2947	19	NNC	ENSMUSG00000035125.11	novel	3519	18	NA	NA	-4	470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.1971929192127	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTGAA	NA	False	NA	NA	False	NA	NA	NA	81900645	81935513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81910708_81910785_81912599_81912744_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ES.28792.9	chr6	+	1761	9	ISM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	-4	15961	-4	230	5prime_fragment	FALSE	canonical	3	41	junction_4	10.4155832769941	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGTTCACTGACTTAG	NA	False	NA	NA	False	AATAAA	-10	NA	81900645	81920935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409
ES.28793.1	chr6	-	1318	2	Antisense	novelGene_ENSMUSG00000035125.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTGTGGCCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81934767	81931849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_81932784_81934383
ES.28794.1	chr6	-	4279	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	29	692	29	-692	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAACAAATTGA	NA	False	NA	NA	False	NA	NA	NA	81942910	81935523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.10	chr6	-	1175	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	20	-1191	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	265.443327284752	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTCTGCACACATAT	NA	False	NA	-4	True	AATAAA	-20	NA	81942919	81936022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81936281_81938894_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.12	chr6	-	5063	5	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	2	-1191	intron_retention	FALSE	non_canonical	0	0	junction_1	285.166070036391	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTCTGCACACATAT	NA	False	NA	-4	True	AATAAA	-20	NA	81942937	81936022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81941050_81941219_81941339_81942687
ES.28794.13	chr6	-	3393	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	26	1581	26	-1581	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTCTGGTTCTTA	NA	False	NA	NA	False	NA	NA	NA	81942913	81936412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.14	chr6	-	3028	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	-1780	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTTTACCTAAAATTA	NA	False	NA	NA	False	AATAAA	-24	NA	81942927	81936611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.15	chr6	-	3207	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	12	1781	12	-1781	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACTTTACCTAAAATT	NA	False	NA	NA	False	AATAAA	-23	NA	81942927	81936612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.16	chr6	-	1950	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	23	1276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGTATTCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	81942916	81937678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.17	chr6	-	1405	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	-7	3602	-7	521	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCATGTCAGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	81942946	81938433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.18	chr6	-	2566	5	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	1	521	intron_retention	FALSE	non_canonical	0	0	junction_1	292.664483666878	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCATGTCAGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	81942938	81938433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219
ES.28794.19	chr6	-	1225	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	-7	521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCATGTCAGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	81942946	81938433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.2	chr6	-	3781	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	1	-1038	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCACCTTGCCTCAGACT	NA	False	NA	NA	False	AATACA	-29	NA	81942938	81935869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.21	chr6	-	1318	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	20	517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAAAGTCTGCATGTC	NA	False	NA	NA	False	ATTAAA	-26	NA	81942919	81938437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938931_81938986_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.23	chr6	-	1100	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCCTTTGGTTAATGT	NA	False	NA	NA	False	NA	NA	NA	81942927	81938539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.24	chr6	-	1255	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	10	3735	10	388	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTTTCTTTTAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	81942929	81938566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.25	chr6	-	1374	4	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	27	345	intron_retention	FALSE	canonical	0	0	junction_2	321.364106410297	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTCTTGACAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	81942912	81938609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81939479_81940914_81941076_81941219_81941339_81942687
ES.28794.26	chr6	-	1101	5	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	23	218	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	280.568173533635	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCATG	NA	False	NA	0	True	NA	NA	NA	81942916	81938736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81939173_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.27	chr6	-	1098	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	-3	3905	-3	218	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCATG	NA	False	NA	0	True	NA	NA	NA	81942942	81938736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.3	chr6	-	1312	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	26	-1048	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	265.443327284752	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTCTTAATCACCTT	NA	False	NA	NA	False	AATATA	-37	NA	81942913	81935879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81936281_81938894_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.4	chr6	-	3901	5	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	24	-1048	intron_retention	FALSE	non_canonical	0	0	junction_1	285.72276773124	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTCTTAATCACCTT	NA	False	NA	NA	False	AATATA	-37	NA	81942915	81935879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.5	chr6	-	3939	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	10	1051	10	-1051	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATAATTTCTTAATCAC	NA	False	NA	NA	False	AATATA	-34	NA	81942929	81935882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.6	chr6	-	3623	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	-68	-1102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.21639203428	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGCTTAACAAATATACT	NA	False	NA	85	True	AATAAA	-17	NA	81942690	81935933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942533
ES.28794.7	chr6	-	1133	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	-1108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGTTGCTTAACAAA	NA	False	NA	79	True	AATAAA	-11	NA	81942927	81935939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81936148_81938894_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.8	chr6	-	3621	6	NNC	ENSMUSG00000030045.11	novel	5000	5	NA	NA	12	-1187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.009293519759	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGCACACATATACAC	NA	False	NA	0	True	AATAAA	-24	NA	81942927	81936018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_81938567_81938746_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28794.9	chr6	-	3801	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	12	1187	12	-1187	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGCACACATATACAC	NA	False	NA	0	True	AATAAA	-24	NA	81942927	81936018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ES.28795.1	chr6	-	1570	1	Intergenic	novelGene_23950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACGCGTATATATGT	NA	False	NA	NA	False	NA	NA	NA	81950163	81948593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_81948600_81950200
ES.28796.1	chr6	+	1598	3	NNC	ENSMUSG00000035104.15	novel	515	3	NA	NA	285	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	82018308	82070080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82018413_82048035_82048224_82068774
ES.28796.2	chr6	+	1760	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	13	0	13	0	multi-exon	FALSE	canonical	3	34	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	82018616	82070080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_82018883_82048035_82048224_82068774
ES.28797.1	chr6	-	177	1	Intergenic	novelGene_23951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	82126525	82126348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82126300_82126500
ES.28798.1	chr6	+	642	3	Intergenic	novelGene_23952	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTCATCAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	82163625	82185013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82163828_82167350_82167454_82184676
ES.28799.1	chr6	+	2633	2	Intergenic	novelGene_23953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACCTTAGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	82587970	82591422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82588415_82589233
ES.28799.2	chr6	+	2234	1	Intergenic	novelGene_23954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACCTTAGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	82589188	82591422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82589200_82591400
ES.288.1	chr1	+	2525	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGTGCACACATTGCT	1746	False	NA	NA	False	NA	NA	NA	36693308	36695833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36693300_36695800
ES.2880.1	chr10	+	228	1	Intergenic	novelGene_2204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATAGACAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	60999702	60999930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_60999700_60999900
ES.28800.1	chr6	+	1024	1	Intergenic	novelGene_23959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	82668704	82669728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82668700_82669700
ES.28801.1	chr6	-	2879	4	FSM	ENSMUSG00000030042.16	ENSMUST00000161309.8	457	4	33	-2455	33	2455	multi-exon	FALSE	canonical	3	132	junction_1	435.143909784134	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCATAGTTCACCTTT	6142	False	NA	NA	False	NA	NA	NA	82682313	82593517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82596120_82628417_82628460_82629063_82629149_82682163
ES.28801.10	chr6	-	1325	1	Intergenic	novelGene_23957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAGCTAATCATATT	NA	False	NA	NA	False	AATAAA	-25	NA	82620474	82619149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82619100_82620500
ES.28801.11	chr6	-	1859	1	Genic_Genomic	ENSMUSG00000030042.16	novel	NA	NA	NA	NA	5674	1715	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTATGGCTACACAATG	NA	False	NA	NA	False	NA	NA	NA	82623825	82621966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_82622000_82623800
ES.28801.12	chr6	-	3178	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	10	-1419	10	1419	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCTTAGCCATTTCT	NA	False	NA	NA	False	NA	NA	NA	82629900	82622262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.13	chr6	-	3061	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-3	1412	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTAGCTACTCTTAGC	6106	False	NA	NA	False	NA	NA	NA	82682349	82622269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
ES.28801.14	chr6	-	1785	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	3	-19	3	19	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTTTAATTTGTG	NA	False	NA	20	True	NA	NA	NA	82629907	82623662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.15	chr6	-	1461	4	NNC	ENSMUSG00000030042.16	novel	890	4	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	417.244133172255	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTCCAGTCTTTCTTG	NA	False	NA	-9	True	ATTAAA	-17	NA	82629500	82623691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629096_82629149_82629459
ES.28801.17	chr6	-	1884	6	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2514	-10	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	451.986105981146	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTCCAGTCTTTCTTG	3595	False	NA	-9	True	ATTAAA	-17	NA	82684860	82623691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163_82682295_82683088_82683236_82684707
ES.28801.18	chr6	-	2362	3	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-1	-12	intron_retention	FALSE	canonical	3	735	junction_2	79	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTCCAGTCTTTCT	NA	False	NA	-11	True	ATTAAA	-15	NA	82629911	82623693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82625018_82628417_82629149_82629604
ES.28801.19	chr6	-	1557	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	2520	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	465.934425524546	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTCCAGTCTTTCT	8629	False	NA	-11	True	ATTAAA	-15	NA	82679826	82623693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82679720
ES.28801.2	chr6	-	1158	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2	635	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTTTCTTTATTTCT	NA	False	NA	NA	False	NA	NA	NA	82629853	82595337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
ES.28801.20	chr6	-	1559	5	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2509	-199	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	469.571812931739	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTGTTTTTAGGTCT	3600	False	NA	NA	False	AATAAA	-25	NA	82684855	82623880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82683088_82683236_82684707
ES.28801.21	chr6	-	1387	4	FSM	ENSMUSG00000030042.16	ENSMUST00000140281.2	455	4	-6	-926	-4	-216	multi-exon	FALSE	canonical	3	9	junction_3	461.738983505713	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTACATTTGTAGA	NA	False	NA	NA	False	AATAAA	-8	NA	82629505	82623897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629365
ES.28801.22	chr6	-	1547	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	6	216	6	-216	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTACATTTGTAGA	NA	False	NA	NA	False	AATAAA	-8	NA	82629904	82623897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.23	chr6	-	1461	4	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-31	-216	combination_of_known_junctions	FALSE	canonical	3	146	junction_3	397.998604129322	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACTACATTTGTAGA	6078	False	NA	NA	False	AATAAA	-8	NA	82682377	82623897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163
ES.28801.24	chr6	-	1025	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2499	39	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	459.408556975403	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTGCTCAGTGAGAT	3610	False	NA	3	True	NA	NA	NA	82684845	82624257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82684707
ES.28801.25	chr6	-	1215	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	-26	580	-26	35	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	NA	False	NA	-1	True	NA	NA	NA	82629936	82624261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.27	chr6	-	1254	6	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2454	35	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	451.986105981146	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTTGCTCAGTG	3655	False	NA	-1	True	NA	NA	NA	82684800	82624261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163_82682295_82683088_82683236_82684707
ES.28801.28	chr6	-	4973	2	ISM	ENSMUSG00000030042.16	ENSMUST00000160281.8	648	4	12	25430	12	34	intron_retention	FALSE	canonical	3	1062	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGTGTTGCTCAGT	NA	False	NA	-2	True	NA	NA	NA	82629839	82624262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_82628460_82629063
ES.28801.29	chr6	-	5579	1	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	8	32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCAGTGTGTTGCTCA	NA	False	NA	-4	True	NA	NA	NA	82629843	82624264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82624300_82629800
ES.28801.3	chr6	-	568	4	NNC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2454	201	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	468.701278949491	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGTTATGTCTCCC	3655	False	NA	77	True	NA	NA	NA	82684800	82595771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82596120_82628417_82628460_82629063_82629149_82684707
ES.28801.30	chr6	-	1729	3	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2	28	intron_retention	FALSE	canonical	3	735	junction_2	79	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTTTTCAGTGTGTTG	NA	False	NA	-8	True	NA	NA	NA	82629853	82624268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82625018_82628417_82629149_82629604
ES.28801.32	chr6	-	5233	4	NNC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2444	24	intron_retention	FALSE	canonical	0	0	junction_2	61.2590129423146	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAACTGCTTTTCAGTGT	3665	False	NA	-12	True	NA	NA	NA	82684790	82624272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82629149_82682163_82682291_82683088_82683236_82684707
ES.28801.33	chr6	-	872	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	-3	900	-3	242	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATTGGAATGTGGATC	NA	False	NA	NA	False	ATTAAA	-17	NA	82629913	82624581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.34	chr6	-	882	6	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-2532	112	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	451.986105981146	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	3577	False	NA	-1	True	AATAAA	-19	NA	82684878	82624711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82682163_82682295_82683088_82683236_82684707
ES.28801.36	chr6	-	717	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	22	1030	22	112	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82629888	82624711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ES.28801.37	chr6	-	564	4	FSM	ENSMUSG00000030042.16	ENSMUST00000140281.2	455	4	3	-112	3	112	multi-exon	FALSE	canonical	3	9	junction_3	461.738983505713	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82629496	82624711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629365
ES.28801.38	chr6	-	1229	3	NIC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	-9	112	intron_retention	FALSE	canonical	3	146	junction_2	373.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	6100	False	NA	-1	True	AATAAA	-19	NA	82682355	82624711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82625018_82628417_82629149_82682163
ES.28801.40	chr6	-	3992	1	Intergenic	novelGene_23958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACCAACAACAACAAAAAA	2982	False	NA	NA	False	NA	NA	NA	82649886	82645894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82645900_82649900
ES.28801.41	chr6	-	3028	2	NNC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2445	-55468	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	0	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAGGGCACTAGCCTC	3664	False	NA	NA	False	NA	NA	NA	82684791	82680291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82683236_82684707
ES.28801.42	chr6	-	1775	2	NNC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2499	-56775	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	0	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTTTGGTCATGGT	3610	False	NA	NA	False	NA	NA	NA	82684845	82681598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82683236_82684707
ES.28801.5	chr6	-	654	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-23	110	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTTTTTCTTTTTCT	NA	False	NA	-14	True	NA	NA	NA	82629874	82595862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
ES.28801.6	chr6	-	742	6	NNC	ENSMUSG00000030042.16	novel	457	4	NA	NA	-2445	106	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	395.216700052009	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATTTCTGTTTTTCTTT	3664	False	NA	-18	True	NA	NA	NA	82684791	82595866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82596120_82628417_82628460_82629063_82629149_82682163_82682295_82683088_82683236_82684707
ES.28801.7	chr6	-	2692	2	NNC	ENSMUSG00000030042.16	novel	648	4	NA	NA	29561	-793	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	82599938	82596765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82599397_82599877
ES.28801.8	chr6	-	4067	2	Intergenic	novelGene_23955	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTGTACTTGAATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	82616347	82612078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82613588_82613789
ES.28801.9	chr6	-	2297	2	Intergenic	novelGene_23956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGATCTCTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	82614759	82612260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82613588_82613789
ES.28802.1	chr6	+	3472	1	Intergenic	novelGene_23960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTGATGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	82695284	82698756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82695300_82698800
ES.28803.1	chr6	+	4470	1	Antisense	novelGene_ENSMUSG00000000628.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAACACAGGGTAGCACAT	NA	False	NA	NA	False	NA	NA	NA	82714634	82719104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_82714600_82719100
ES.28804.1	chr6	-	7782	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-2	-2267	-2	2267	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTAGAGTCTTGTGTC	9396	False	NA	NA	False	AATAAA	-16	NA	82751437	82699738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.10	chr6	-	6354	16	NIC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	17	0	intron_retention	FALSE	canonical	3	435	junction_12	54.9890494149113	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9415	False	NA	-1	True	AATAAA	-23	NA	82751418	82702005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.17	chr6	-	5483	18	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	18	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	135.135175180018	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGTGTGTGATTGGA	9416	False	NA	-2	True	AATAAA	-22	NA	82751417	82702006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709167_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.2	chr6	-	5553	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-35	-5	-35	5	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGATTGGATCTTTT	9363	False	NA	4	True	AATAAA	-28	NA	82751470	82702000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.20	chr6	-	5063	18	NIC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	264	-4	intron_retention	FALSE	canonical	3	30	junction_17	128.54207771755	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTCAGTGTGTGATT	4338	False	NA	-5	True	AATAAA	-19	NA	82749705	82702009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82749614
ES.28804.24	chr6	-	5535	18	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_16	134.060333471093	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	9395	False	NA	-6	True	AATAAA	-18	NA	82751438	82702010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726343_82737084_82737248_82750898
ES.28804.26	chr6	-	5474	18	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	135.155350830559	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	9396	False	NA	-6	True	AATAAA	-18	NA	82751437	82702010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708089_82709077_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.28	chr6	-	3179	6	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	-5687	-5	intron_retention	FALSE	canonical	0	0	junction_5	234.006495636339	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	82708977	82702010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82708897
ES.28804.30	chr6	-	6556	17	NIC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	19	-5	intron_retention	FALSE	canonical	3	435	junction_13	55.2613110593659	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATATTCAGTGTGTGAT	9417	False	NA	-6	True	AATAAA	-18	NA	82751416	82702010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82704436_82705692_82705927_82706525_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.32	chr6	-	4823	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-32	722	-32	-685	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAAGATACGGGGGTC	9366	False	NA	NA	False	AATAAA	-24	NA	82751467	82702727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.33	chr6	-	3904	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	19	1590	19	695	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTGTGTAATGGTTAA	9417	False	NA	NA	False	NA	NA	NA	82751416	82703595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.34	chr6	-	3540	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	19	1954	19	331	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGATACTTCTGTCA	9417	False	NA	NA	False	NA	NA	NA	82751416	82703959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.35	chr6	-	3453	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	-33	2093	-33	192	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTGCTGGTCACTTCC	9365	False	NA	NA	False	NA	NA	NA	82751468	82704098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.5	chr6	-	5489	18	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_11	135.126059304318	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9416	False	NA	-1	True	AATAAA	-23	NA	82751417	82702005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719789_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.6	chr6	-	4782	16	NNC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	-18915	0	intron_retention	FALSE	canonical	0	0	junction_15	142.206266466082	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	8640	False	NA	-1	True	AATAAA	-23	NA	82722205	82702005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82722087
ES.28804.7	chr6	-	5394	17	NIC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_12	139.289716059729	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9417	False	NA	-1	True	AATAAA	-23	NA	82751416	82702005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ES.28804.9	chr6	-	5425	16	NIC	ENSMUSG00000000628.11	novel	5513	18	NA	NA	21	0	intron_retention	FALSE	canonical	1	6	junction_15	139.370234348021	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9419	False	NA	-1	True	AATAAA	-23	NA	82751414	82702005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82750898
ES.28805.1	chr6	+	176	1	Intergenic	novelGene_23961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAAGTGTTAGTCTG	NA	False	NA	NA	False	NA	NA	NA	82802651	82802827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82802700_82802800
ES.28806.1	chr6	+	1065	2	Antisense	novelGene_ENSMUSG00000100291.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGTGCTGGTGCTTA	NA	False	NA	NA	False	TATAAA	-38	NA	82856650	82864332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_82856716_82863332
ES.28807.1	chr6	-	5239	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	26	-1179	26	1179	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGCTTCCACATCCT	NA	False	NA	NA	False	AATAAA	-24	NA	82916724	82887686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
ES.28807.2	chr6	-	4102	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	-8	-8	-8	8	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTATTGTAGCTGTTG	NA	False	NA	3	True	NA	NA	NA	82916758	82888857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
ES.28807.6	chr6	-	4030	14	NNC	ENSMUSG00000000627.16	novel	4086	14	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.98875106952786	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGCGGGCGTGGTTAT	NA	False	NA	-8	True	NA	NA	NA	82916715	82888868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896432_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
ES.28807.7	chr6	-	3948	13	NIC	ENSMUSG00000000627.16	novel	4086	14	NA	NA	35	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	10.2293151720381	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCAGCGGGCGTGGTTA	NA	False	NA	-9	True	NA	NA	NA	82916715	82888869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912875_82912936_82914041_82914194_82916441
ES.28808.1	chr6	+	160	1	Intergenic	novelGene_23962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	82919209	82919369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82919200_82919400
ES.28809.1	chr6	+	3580	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	-29	4	intron_retention	FALSE	canonical	0	0	junction_7	186.808683885413	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGAGCATTCCTGGG	NA	False	NA	16	True	ATTAAA	-21	NA	82923853	83007168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.10	chr6	+	2383	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	19	-457	19	331	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTCATGCAAGCGGT	NA	False	NA	NA	False	ACTAAA	-16	NA	82923901	83007621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.12	chr6	+	1782	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	187.231641289607	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923903	83007163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83006750
ES.28809.14	chr6	+	4228	3	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	21	58317	21	-57957	5prime_fragment	FALSE	canonical	3	454	junction_1	78.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATATTTACATAGTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	82923903	82948847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_82923934_82933389_82933688_82944947
ES.28809.15	chr6	+	1862	10	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.535763371782	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923904	83007163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982546_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.19	chr6	+	2133	10	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	34	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.298931528256	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAGAAAAAGCAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	82923916	83007282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82924038_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.2	chr6	+	2102	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	-26	-131	-26	5	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGCATCAGAACCTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	82923856	83007295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.20	chr6	+	3559	3	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	34	58973	34	-58613	5prime_fragment	FALSE	canonical	3	454	junction_1	78.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACCCAAACGGTTATAC	NA	False	NA	NA	False	AAGAAA	-3	NA	82923916	82948191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_82923934_82933389_82933688_82944947
ES.28809.21	chr6	+	2001	10	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	49	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.298931528256	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTCAGAGCATTCCT	NA	False	NA	13	True	ATTAAA	-18	NA	82923931	83007165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82924038_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.22	chr6	+	1895	9	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	9505	1	9505	-1	3prime_fragment	FALSE	canonical	0	0	junction_7	187.106545516184	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82933387	83007163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.23	chr6	+	6024	2	Intergenic	novelGene_23964	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGAGGAAGAGGAGGA	NA	False	NA	NA	False	AAAAAG	-24	NA	82937524	82943612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82937643_82937706
ES.28809.24	chr6	+	2589	1	Intergenic	novelGene_23965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTTCTTGAAATTTGT	4245	False	NA	NA	False	NA	NA	NA	82951156	82953745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82951200_82953700
ES.28809.25	chr6	+	225	1	Intergenic	novelGene_23966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCTGATAACCTCTA	5290	False	NA	NA	False	NA	NA	NA	82965833	82966058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_82965800_82966100
ES.28809.26	chr6	+	4670	4	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	-22451	-3	intron_retention	FALSE	canonical	3	481	junction_3	64.9221756327442	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCATTGTTCAGAGCAT	NA	False	NA	9	True	ATTAAA	-14	NA	82980867	83007161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_82982650_82983298_82983441_83003178_83005514_83006750
ES.28809.27	chr6	+	1236	6	NNC	ENSMUSG00000030041.10	novel	607	2	NA	NA	-21242	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	264.392586885487	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCATTGTTCAGAGCAT	NA	False	NA	9	True	ATTAAA	-14	NA	82982076	83007161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82982249_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.28	chr6	+	604	3	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	-19938	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCATTGTTCAGAGCAT	NA	False	NA	9	True	ATTAAA	-14	NA	82983380	83007161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82983441_83003252_83003386_83006750
ES.28809.3	chr6	+	2785	5	ISM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	-10	24383	-10	-24023	intron_retention	FALSE	canonical	3	454	junction_1	60.4416040488669	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82923872	82982781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710
ES.28809.4	chr6	+	1964	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	-4	-15	-4	15	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGGGCCAGAATTTCT	NA	False	NA	27	True	ATTAAA	-32	NA	82923878	83007179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.5	chr6	+	881	5	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	-3	-38294	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	241.246113958339	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTTTTTCCGTGTG	NA	False	NA	NA	False	NA	NA	NA	82923879	82968510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82968336
ES.28809.6	chr6	+	1185	7	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	247.202795741113	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTTCAGAGCATTC	NA	False	NA	11	True	ATTAAA	-16	NA	82923883	83007163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82923934_82933389_82933588_82982615_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ES.28809.8	chr6	+	4429	5	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	19	-34724	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	241.246113958339	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGGCCTCTTTATGG	NA	False	NA	NA	False	AATAAA	-14	NA	82923901	82972080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82968336
ES.2881.1	chr10	-	4241	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-171	0	-142	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983624	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.10	chr10	-	4110	15	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	120.727809893299	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983350	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983220
ES.2881.11	chr10	-	9923	11	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	186	junction_10	88.8412066554704	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983389	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.12	chr10	-	7084	11	NIC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	155	junction_10	96.8989680027605	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983383	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.13	chr10	-	4195	15	NIC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	-127	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	117.157773440566	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983609	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983394
ES.2881.14	chr10	-	5359	11	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	31798	2	-10369	1	3prime_fragment	FALSE	canonical	3	342	junction_7	46.5579209157797	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	6452	False	NA	-4	True	AATAAA	-14	NA	60951625	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788
ES.2881.16	chr10	-	6011	12	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	1	1	intron_retention	FALSE	canonical	2	2	junction_9	143.090158251467	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983452	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60959087_60959254_60982036_60982111_60983301
ES.2881.17	chr10	-	4154	8	NIC	ENSMUSG00000020097.15	novel	4361	15	NA	NA	-6756	1	intron_retention	FALSE	canonical	3	342	junction_6	51.0961478639106	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60948012	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940
ES.2881.2	chr10	-	3947	16	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.057798793643	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983411	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60935480_60935560_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.21	chr10	-	4165	15	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.743179353325	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983437	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949165_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.22	chr10	-	4021	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	135.26355603723	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983440	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948076_60949256_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.23	chr10	-	4632	4	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	-45	1	intron_retention	FALSE	canonical	3	403	junction_2	21.4009345590327	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60941301	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60940392_60941200
ES.2881.24	chr10	-	3960	14	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	11	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	136.263580290588	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983412	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.25	chr10	-	4640	3	NIC	ENSMUSG00000020097.15	novel	4361	15	NA	NA	1116	1	intron_retention	FALSE	canonical	3	422	junction_2	16	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60940140	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60938494_60938899
ES.2881.26	chr10	-	3935	14	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.770658467931	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983379	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.27	chr10	-	4107	15	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983436	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982105_60983301
ES.2881.28	chr10	-	5191	14	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	12	1	intron_retention	FALSE	canonical	3	186	junction_13	78.6173415381908	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTGGATGGTTGATTT	NA	False	NA	-4	True	AATAAA	-14	NA	60983411	60934422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.3	chr10	-	4364	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	-262	0	-203	0	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983685	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.30	chr10	-	3114	1	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	1367	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	528	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGGATGGTTGATT	595	False	NA	-5	True	AATAAA	-13	NA	60937537	60934423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60934400_60937500
ES.2881.31	chr10	-	3841	14	NIC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	134.560604238454	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGGATGGTTGATT	NA	False	NA	-5	True	AATAAA	-13	NA	60983404	60934423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.32	chr10	-	3877	13	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	-28241	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	165.288048233648	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGGATGGTTGATT	NA	False	NA	-5	True	AATAAA	-13	NA	61011723	60934423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60959087_60959254_61011681
ES.2881.33	chr10	-	4100	15	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.743179353325	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGGATGGTTGATT	NA	False	NA	-5	True	AATAAA	-13	NA	60983412	60934423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949204_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.36	chr10	-	1939	16	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.612700254161	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGGATGGTTGATT	NA	False	NA	-5	True	AATAAA	-13	NA	60983412	60934423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60934520_60936668_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.39	chr10	-	4149	15	NNC	ENSMUSG00000020097.15	novel	4102	15	NA	NA	97	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	119.535772973651	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCATTGGATGGTTGAT	NA	False	NA	-6	True	AATAAA	-12	NA	60983286	60934424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983113
ES.2881.4	chr10	-	3966	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	136.344196047791	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983413	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938963_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.40	chr10	-	3946	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	0	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCCTCTTTGAAATCTA	NA	False	NA	-117	True	NA	NA	NA	60983453	60934535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983372
ES.2881.41	chr10	-	3961	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-7	116	-5	-113	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCCTCTTTGAAATCT	NA	False	NA	-118	True	NA	NA	NA	60983460	60934536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.43	chr10	-	4001	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	-21	122	9	-119	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTACTTGCCTCTTTG	NA	False	NA	NA	False	AATATA	-41	NA	60983444	60934542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ES.2881.45	chr10	-	3923	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	-10	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGGTACTTGCCTCTT	NA	False	NA	NA	False	AATATA	-39	NA	60983441	60934544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982105_60983368
ES.2881.46	chr10	-	2039	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	-1	2032	1	151	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTGAGTCTGTCCTGG	NA	False	NA	NA	False	GGGGCT	-31	NA	60983454	60936452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.5	chr10	-	5171	14	NIC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	155	junction_13	85.5665421534298	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983451	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ES.2881.7	chr10	-	4061	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983455	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982105_60983368
ES.2881.9	chr10	-	4148	15	NNC	ENSMUSG00000020097.15	novel	4070	15	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	120.727809893299	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983540	60934420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983372
ES.28810.1	chr6	-	183	1	Intergenic	novelGene_23963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAGGAACTAAA	8510	False	NA	NA	False	NA	NA	NA	82931208	82931025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82931000_82931200
ES.28811.1	chr6	-	965	1	Intergenic	novelGene_23967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACGACTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	82976744	82975779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_82975800_82976700
ES.28812.1	chr6	-	1788	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	15	4	12	2	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCCTCTGCGTATGAA	NA	False	NA	-8	True	ATTAAA	-15	NA	83010437	83007918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
ES.28812.2	chr6	-	1936	4	FSM	ENSMUSG00000068335.7	ENSMUST00000149918.2	1966	4	30	0	30	0	multi-exon	FALSE	canonical	2	3	junction_3	15.121728296285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGCCTCTGCGTATG	NA	False	NA	-10	True	ATTAAA	-13	NA	83010419	83007920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83009397_83009515_83009610_83009747_83010046_83010351
ES.28813.1	chr6	+	2857	14	FSM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	2	1239	2	656	multi-exon	FALSE	canonical	2	3	junction_1	2.5903781908435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGGACTGATGCAGCG	2231	False	NA	NA	False	TATAAA	-14	NA	83011155	83028304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ES.28813.2	chr6	+	3773	11	NIC	ENSMUSG00000000693.11	novel	4098	14	NA	NA	6	-606	intron_retention	FALSE	canonical	2	3	junction_1	1.85741756210067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATGGTGTTGATCAAC	2235	False	NA	NA	False	CATAAA	-19	NA	83011159	83028937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83027651_83027780
ES.28813.3	chr6	+	2905	13	NNC	ENSMUSG00000000693.11	novel	4098	14	NA	NA	30	655	intron_retention	FALSE	canonical	0	0	junction_4	3.57071421427143	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCAGGACTGATGCAGC	2259	False	NA	NA	False	TATAAA	-13	NA	83011183	83028303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015542_83024968_83025189_83025558_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027080_83027213_83027288_83027426_83027538_83027651_83027780
ES.28813.4	chr6	+	2943	16	NNC	ENSMUSG00000000693.11	novel	4098	14	NA	NA	31	654	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	3.0739045022396	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCCAGGACTGATGCAG	2260	False	NA	NA	False	TATAAA	-12	NA	83011184	83028302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83021095_83021153_83021727_83021788_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ES.28814.1	chr6	+	1710	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	-65	124	-65	2	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGCCTCTTTGGGT	5148	False	NA	11	True	ATTAAA	-21	NA	83031436	83034665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.10	chr6	+	1398	6	NNC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_2	544.0895514527	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5404	False	NA	7	True	ATTAAA	-17	NA	83031692	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032672_83033522_83033626_83033767_83033860_83034256_83034376_83034478
ES.28814.11	chr6	+	2302	7	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	960	junction_5	68.369096332578	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5413	False	NA	5	True	ATTAAA	-15	NA	83031701	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.12	chr6	+	1830	9	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	-2	2	intron_retention	FALSE	canonical	3	985	junction_3	72.8903285765677	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5419	False	NA	7	True	ATTAAA	-17	NA	83031707	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83034376_83034478
ES.28814.13	chr6	+	1281	11	FSM	ENSMUSG00000068328.11	ENSMUST00000204343.4	1265	11	-20	4	-1	0	multi-exon	FALSE	canonical	1	4	junction_2	333.699805214207	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5420	False	NA	5	True	ATTAAA	-15	NA	83031708	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83031814_83031891_83032030_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.14	chr6	+	1653	11	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_1	332.831248532947	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5421	False	NA	7	True	ATTAAA	-17	NA	83031709	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031808_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.15	chr6	+	2261	7	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	992	junction_5	54.9537684482754	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5421	False	NA	5	True	ATTAAA	-15	NA	83031709	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83033416_83033522_83033626_83033739_83034376_83034478
ES.28814.16	chr6	+	1767	10	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	960	junction_8	79.2984672839283	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5421	False	NA	7	True	ATTAAA	-17	NA	83031709	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.17	chr6	+	1798	10	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_8	343.100604329631	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.18	chr6	+	1459	12	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	412.730016010106	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.19	chr6	+	2229	6	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	992	junction_5	75.3004648060024	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032672_83032878_83032952_83033047_83033122_83033348_83033626_83033739
ES.28814.2	chr6	+	1884	11	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	-45	2	intron_retention	FALSE	canonical	3	56	junction_7	319.708367109777	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5168	False	NA	7	True	ATTAAA	-17	NA	83031456	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.20	chr6	+	2768	3	NIC	ENSMUSG00000068328.11	novel	1826	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	1074	junction_1	27.5	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83032030_83032109_83034376_83034478
ES.28814.21	chr6	+	1512	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	960	junction_9	82.6438745461513	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.22	chr6	+	2791	3	FSM	ENSMUSG00000068328.11	ENSMUST00000204761.3	620	3	-8	-2163	1	0	multi-exon	FALSE	canonical	3	1074	junction_2	27	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5422	False	NA	5	True	ATTAAA	-15	NA	83031710	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83031814_83031891_83032030_83032109
ES.28814.23	chr6	+	1957	8	NIC	ENSMUSG00000068328.11	novel	1826	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	960	junction_6	74.0181996373258	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.24	chr6	+	2410	6	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	960	junction_4	84.3530675198004	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5422	False	NA	5	True	ATTAAA	-15	NA	83031710	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032952_83033047_83034075_83034256_83034376_83034478
ES.28814.25	chr6	+	1466	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	317.362816071438	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031857_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.26	chr6	+	2183	7	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_3	417.701248900854	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032900_83032952_83033047_83034075_83034256_83034376_83034478
ES.28814.27	chr6	+	2125	7	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	44	junction_2	410.744615167246	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83031995_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83034376_83034478
ES.28814.28	chr6	+	1316	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	332.959096586953	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83034256_83034376_83034478
ES.28814.29	chr6	+	2759	3	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	992	junction_2	68	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83033626_83033739
ES.28814.3	chr6	+	1551	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	21	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	317.12207936872	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5234	False	NA	7	True	ATTAAA	-17	NA	83031522	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.30	chr6	+	1951	8	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	960	junction_6	82.9679062613235	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83034075_83034256_83034376_83034478
ES.28814.31	chr6	+	2205	7	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	960	junction_5	77.5041217541938	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5422	False	NA	7	True	ATTAAA	-17	NA	83031710	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83034075_83034256_83034376_83034478
ES.28814.32	chr6	+	1330	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	415.004132210832	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAAGGTCTCTGTTGCCT	5423	False	NA	3	True	ATTAAA	-13	NA	83031711	83034657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.35	chr6	+	5309	22	Fusion	ENSMUSG00000009145.7_ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	-101	intron_retention	FALSE	canonical	0	0	junction_12	537.776896983968	1550	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTCTATGATGCCAAG	5423	False	NA	NA	False	AATAAA	-18	NA	83031711	83044198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478_83036092_83036178_83036513_83036665_83036808_83037148_83037383_83037471_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83041966_83043070_83043262_83043413
ES.28814.36	chr6	+	1690	11	NNC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_9	432.206999017832	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.37	chr6	+	1525	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	960	junction_9	81.0392497497355	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAAGGTCTCTGTTGCCT	5424	False	NA	3	True	ATTAAA	-13	NA	83031712	83034657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83034075_83034256_83034376_83034478
ES.28814.38	chr6	+	1395	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.39	chr6	+	2653	4	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	44	junction_2	511.238365800794	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83031995_83032109_83034376_83034478
ES.28814.4	chr6	+	2128	8	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	57	0	intron_retention	FALSE	canonical	3	960	junction_6	74.1421690031375	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5270	False	NA	5	True	ATTAAA	-15	NA	83031558	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83034075_83034256_83034376_83034478
ES.28814.40	chr6	+	1570	11	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_9	325.503671254258	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.41	chr6	+	1251	11	NNC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	433.152213430798	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.42	chr6	+	2768	3	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	1128	junction_1	0.5	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83034376_83034478
ES.28814.43	chr6	+	1734	10	FSM	ENSMUSG00000068328.11	ENSMUST00000204895.3	1826	10	86	6	1	2	multi-exon	FALSE	canonical	3	960	junction_8	79.6814646104672	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.44	chr6	+	1718	11	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	25	junction_9	328.64937243208	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5424	False	NA	7	True	ATTAAA	-17	NA	83031712	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.45	chr6	+	1755	10	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	960	junction_9	79.6143482322404	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAAGGTCTCTGTTGCCT	5424	False	NA	3	True	ATTAAA	-13	NA	83031712	83034657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256
ES.28814.46	chr6	+	1403	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	472.302256492178	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCAAGGTCTCTGTTGC	5424	False	NA	1	True	ATTAAA	-11	NA	83031712	83034655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032667_83032878_83032952_83033054_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034487
ES.28814.47	chr6	+	1618	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	44	junction_2	322.034097573533	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5425	False	NA	5	True	ATTAAA	-15	NA	83031713	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83031995_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.48	chr6	+	1409	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	320.371607578057	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5425	False	NA	5	True	ATTAAA	-15	NA	83031713	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034057_83034256_83034376_83034478
ES.28814.49	chr6	+	1401	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	304.835872382023	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5425	False	NA	7	True	ATTAAA	-17	NA	83031713	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.5	chr6	+	3080	1	FSM	ENSMUSG00000068328.11	ENSMUST00000204385.2	1627	1	-128	-1325	-45	2	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5293	False	NA	7	True	ATTAAA	-17	NA	83031581	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83031600_83034700
ES.28814.50	chr6	+	1760	10	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	-1	2	intron_retention	FALSE	canonical	3	960	junction_8	75.0769152927619	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5427	False	NA	7	True	ATTAAA	-17	NA	83031715	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.51	chr6	+	2465	6	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	992	junction_4	73.9378117068662	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCAAGGTCTCTGTTGC	5431	False	NA	1	True	ATTAAA	-11	NA	83031719	83034655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032952_83033047_83033626_83033739_83034376_83034478
ES.28814.52	chr6	+	2686	12	NNC	ENSMUSG00000009145.7	novel	3257	12	NA	NA	-19	-277	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	2.71207888912296	1090	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGTTTTACGAG	838	False	NA	37	True	NA	NA	NA	83035058	83044022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83035121_83035470_83035717_83035897_83036092_83036419_83036808_83037148_83037383_83037471_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83041966_83043070_83043262_83043413
ES.28814.53	chr6	+	913	3	NNC	ENSMUSG00000009145.7	novel	1032	4	NA	NA	-17	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTATGCCTGTTTTC	840	False	NA	NA	False	NA	NA	NA	83035060	83037026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83035121_83035470_83035717_83036419
ES.28814.54	chr6	+	3959	12	NNC	ENSMUSG00000009145.7	novel	3257	12	NA	NA	-13	-108	intron_retention	FALSE	canonical	0	0	junction_1	4.00619355209649	1090	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTTCTATGA	844	False	NA	NA	False	AATAAA	-11	NA	83035064	83044191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83035121_83035212_83035244_83035470_83035717_83035897_83036092_83036419_83036513_83036627_83036808_83037148_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83043262_83043413
ES.28814.55	chr6	+	4186	11	NNC	ENSMUSG00000009145.7	novel	3257	12	NA	NA	2	-108	intron_retention	FALSE	canonical	0	0	junction_1	3.80657326213486	1090	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTTCTATGA	859	False	NA	NA	False	AATAAA	-11	NA	83035079	83044191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83035121_83035212_83035371_83035470_83035717_83035897_83036092_83036419_83036808_83037148_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83043262_83043413
ES.28814.56	chr6	+	1235	2	NNC	ENSMUSG00000009145.7	novel	1032	4	NA	NA	567	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCTTATAATTGTAGA	1424	False	NA	NA	False	AATAAA	-22	NA	83035644	83036966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83036092_83036178
ES.28814.6	chr6	+	1745	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	-3	2	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5335	False	NA	7	True	ATTAAA	-17	NA	83031623	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ES.28814.7	chr6	+	1563	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	-72	0	13	0	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5351	False	NA	5	True	ATTAAA	-15	NA	83031639	83034659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ES.28814.8	chr6	+	5123	21	Fusion	ENSMUSG00000009145.7_ENSMUSG00000068328.11	novel	1769	12	NA	NA	18	-108	intron_retention	FALSE	canonical	0	0	junction_20	539.369490701875	1550	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTTCTATGA	5356	False	NA	NA	False	AATAAA	-11	NA	83031644	83044191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478_83036092_83036419_83036808_83037148_83037383_83037471_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83041966_83043070_83043262_83043543
ES.28814.9	chr6	+	2448	6	NIC	ENSMUSG00000068328.11	novel	1826	10	NA	NA	27	2	intron_retention	FALSE	canonical	3	960	junction_4	84.1736300749825	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTCTGTTGCCTCTTT	5365	False	NA	7	True	ATTAAA	-17	NA	83031653	83034661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83032030_83032109_83032952_83033047_83033860_83033958_83034075_83034256_83034376_83034478
ES.28815.1	chr6	+	1489	9	NNC	ENSMUSG00000069678.11	novel	580	4	NA	NA	-9374	0	intron_retention	FALSE	canonical	0	0	junction_1	65.3345955447801	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	6196	False	NA	16	True	AATAAA	-8	NA	83045475	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83046188_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.10	chr6	+	921	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	-11	8	-11	0	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	95	False	NA	16	True	AATAAA	-8	NA	83055315	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.11	chr6	+	906	9	NNC	ENSMUSG00000069678.11	novel	866	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.7117406271845	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	108	False	NA	16	True	AATAAA	-8	NA	83055328	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057126_83057536_83057612_83057690
ES.28815.12	chr6	+	987	8	ISM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	2	8	2	0	intron_retention	FALSE	canonical	3	163	junction_1	15.5366584277972	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	108	False	NA	16	True	AATAAA	-8	NA	83055328	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530
ES.28815.14	chr6	+	1317	9	Fusion	ENSMUSG00000034968.4_ENSMUSG00000069678.11	novel	918	9	NA	NA	14	-2	multi-exon	FALSE	canonical	1	2	junction_8	64.3112548470328	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCCTCAATTCGGAAA	120	False	NA	NA	False	AATAAA	-20	NA	83055340	83065222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83064663
ES.28815.15	chr6	+	2487	1	NIC	ENSMUSG00000069678.11	novel	918	9	NA	NA	15	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	121	False	NA	16	True	AATAAA	-8	NA	83055341	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83055300_83057800
ES.28815.17	chr6	+	886	9	NNC	ENSMUSG00000069678.11	novel	918	9	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.3940719185892	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGCACTTTTCATCTT	121	False	NA	15	True	AATAAA	-7	NA	83055341	83057827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83055460_83055875_83055982_83056096_83056254_83056420_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057536_83057612_83057690
ES.28815.18	chr6	+	1592	6	NIC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	163	junction_1	14.1844985811977	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	143	False	NA	16	True	AATAAA	-8	NA	83055363	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056937_83057034_83057612_83057690
ES.28815.19	chr6	+	933	4	NIC	ENSMUSG00000069678.11	novel	866	9	NA	NA	575	0	intron_retention	FALSE	canonical	3	190	junction_3	3.29983164553722	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	764	False	NA	16	True	AATAAA	-8	NA	83056273	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83056487_83056620_83057122_83057530_83057612_83057690
ES.28815.2	chr6	+	2539	12	NNC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-9374	0	intron_retention	FALSE	canonical	1	2	junction_1	81.0948837183287	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	6196	False	NA	16	True	AATAAA	-8	NA	83045475	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83046188_83049218_83049526_83054554_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.3	chr6	+	1061	9	NNC	ENSMUSG00000069678.11	novel	580	4	NA	NA	-8423	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.3345955447801	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	7147	False	NA	16	True	AATAAA	-8	NA	83046426	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83046711_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.4	chr6	+	2659	11	NNC	ENSMUSG00000069678.11	novel	580	4	NA	NA	-7323	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	87.0404503664819	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	8247	False	NA	16	True	AATAAA	-8	NA	83047526	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83048437_83049218_83049526_83054554_83055220_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.5	chr6	+	1945	12	NNC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-6531	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	80.471646872754	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	9039	False	NA	16	True	AATAAA	-8	NA	83048318	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83048437_83049218_83049526_83054554_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.6	chr6	+	2030	13	NNC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-6518	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	86.175209118787	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	9052	False	NA	16	True	AATAAA	-8	NA	83048331	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83048437_83049038_83049137_83049218_83049526_83054554_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.7	chr6	+	2393	12	NNC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-6498	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.4108040020762	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	9072	False	NA	16	True	AATAAA	-8	NA	83048351	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83048918_83049218_83049526_83054554_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.8	chr6	+	4064	9	NNC	ENSMUSG00000069678.11	novel	918	9	NA	NA	-5454	0	intron_retention	FALSE	canonical	1	1	junction_1	65.00769185258	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATCTTCCTTCTTAC	870	False	NA	24	True	AATAAA	-16	NA	83049395	83057836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83049526_83052726_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28815.9	chr6	+	3190	10	NIC	ENSMUSG00000069678.11	novel	866	9	NA	NA	-1965	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	54.0160012872272	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	1607	False	NA	16	True	AATAAA	-8	NA	83052884	83057828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83055220_83055381_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ES.28816.1	chr6	-	1866	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	-145	4	-145	-4	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	1752	False	NA	-2	True	AATAAA	-27	NA	83031697	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.10	chr6	-	1778	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	30	junction_4	192.963439254406	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2021	False	NA	-2	True	AATAAA	-27	NA	83031428	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83030018_83030505_83030593_83030799_83030901
ES.28816.11	chr6	-	1775	7	NNC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-24	-6	intron_retention	FALSE	canonical	2	4	junction_4	206.952222076068	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTGGGGGTTGGATC	2002	False	NA	-4	True	AATAAA	-25	NA	83031447	83028252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029843_83030018_83030052_83030309_83030505_83030593
ES.28816.12	chr6	-	1998	6	NIC	ENSMUSG00000068329.13	novel	1605	7	NA	NA	-19	-6	intron_retention	FALSE	canonical	3	429	junction_5	71.0943035692734	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTGGGGGTTGGATC	2007	False	NA	-4	True	AATAAA	-25	NA	83031442	83028252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.15	chr6	-	1754	7	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	203.551522279305	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTACAGTCAAAAGTGGG	1838	False	NA	-13	True	AATAAA	-16	NA	83031611	83028261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029803_83030309_83030505_83030593_83030799_83030901
ES.28816.16	chr6	-	1601	8	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.124576480613	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTACAGTCAAAAGTGGG	2001	False	NA	-13	True	AATAAA	-16	NA	83031448	83028261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029776_83030014_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.17	chr6	-	1391	8	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	190.632566761831	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	2051	False	NA	-15	True	AATAAA	-14	NA	83031398	83028263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83031064
ES.28816.18	chr6	-	2353	4	NIC	ENSMUSG00000068329.13	novel	1108	6	NA	NA	-24	1	intron_retention	FALSE	canonical	3	493	junction_3	67.6527079198526	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	2002	False	NA	-15	True	AATAAA	-14	NA	83031447	83028263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83030505_83030593
ES.28816.19	chr6	-	2449	3	ISM	ENSMUSG00000068329.13	ENSMUST00000122955.8	1605	7	98	3	-31	1	intron_retention	FALSE	canonical	3	507	junction_2	68	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	1995	False	NA	-15	True	AATAAA	-14	NA	83031454	83028263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83028616_83028722_83028819_83029453
ES.28816.2	chr6	-	2002	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-47	-4	intron_retention	FALSE	canonical	3	429	junction_6	64.9095524557056	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	1850	False	NA	-2	True	AATAAA	-27	NA	83031599	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.20	chr6	-	1753	8	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.124576480613	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTACAGTCAAAAGTG	2002	False	NA	-15	True	AATAAA	-14	NA	83031447	83028263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029898_83029981_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.23	chr6	-	1496	7	FSM	ENSMUSG00000068329.13	ENSMUST00000122955.8	1605	7	105	4	-24	0	multi-exon	FALSE	canonical	2	4	junction_3	204.724543933767	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2002	False	NA	-16	True	AATAAA	-13	NA	83031447	83028264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.24	chr6	-	1659	7	NIC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-18	0	intron_retention	FALSE	canonical	2	3	junction_4	207.314374803099	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2008	False	NA	-16	True	AATAAA	-13	NA	83031441	83028264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83029981_83030052_83030309_83030505_83030593
ES.28816.27	chr6	-	1652	8	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	191.794852136658	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2010	False	NA	-16	True	AATAAA	-13	NA	83031439	83028264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029843_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.28	chr6	-	2189	5	NIC	ENSMUSG00000068329.13	novel	2512	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	493	junction_4	59.6337781798202	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTACAGTCAAAAGT	2010	False	NA	-16	True	AATAAA	-13	NA	83031439	83028264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030505_83030593
ES.28816.3	chr6	-	2182	5	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	429	junction_4	76.6040958434991	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2017	False	NA	-2	True	AATAAA	-27	NA	83031432	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030799_83030901
ES.28816.4	chr6	-	1701	8	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-57	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	183.177063888179	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	1840	False	NA	-2	True	AATAAA	-27	NA	83031609	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.6	chr6	-	1555	8	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	192.127190014472	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2023	False	NA	-2	True	AATAAA	-27	NA	83031426	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83029981_83030052_83030309_83030505_83030593_83030799_83030901
ES.28816.7	chr6	-	2229	5	NIC	ENSMUSG00000068329.13	novel	1108	6	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	493	junction_4	58.6344608570762	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	1881	False	NA	-2	True	AATAAA	-27	NA	83031568	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028616_83028722_83028819_83029453_83030052_83030309_83030505_83030593
ES.28816.8	chr6	-	1624	8	NNC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	192.987574941064	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2020	False	NA	-2	True	AATAAA	-27	NA	83031429	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030825_83030901
ES.28816.9	chr6	-	1957	6	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	429	junction_5	41.0580077451403	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGGGGTTGGATCTT	2002	False	NA	-2	True	AATAAA	-27	NA	83031447	83028250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593_83030799_83030901
ES.28817.1	chr6	-	4550	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-90	-3224	-90	2957	multi-exon	FALSE	canonical	3	90	junction_1	3	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGACTGTTTTGC	7086	False	NA	NA	False	ATTAAA	-20	NA	83047364	83042347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83045956_83046034_83046273_83046660
ES.28817.2	chr6	-	4192	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	-925	1297	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTAATGTAT	6251	False	NA	NA	False	NA	NA	NA	83048199	83044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83044000_83048200
ES.28817.3	chr6	-	2707	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	93	-1564	25	1297	multi-exon	FALSE	canonical	3	90	junction_1	3	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTAATGTAT	7269	False	NA	NA	False	NA	NA	NA	83047181	83044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83045956_83046034_83046273_83046660
ES.28817.4	chr6	-	1596	2	ISM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	1001	-973	933	706	3prime_fragment	FALSE	canonical	3	90	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCACATGTGTTGTG	8177	False	NA	NA	False	NA	NA	NA	83046273	83044598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83045956_83046034
ES.28817.5	chr6	-	2481	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-972	-273	-972	6	multi-exon	FALSE	canonical	3	90	junction_1	3	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCAGTTGTCTCCTGC	6204	False	NA	0	True	AAAACA	-26	NA	83048246	83045298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83045956_83046034_83046273_83046660
ES.28817.6	chr6	-	2738	2	ISM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	-845	-269	-845	2	intron_retention	FALSE	canonical	3	90	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTCTCCAGTTGTCTC	6331	False	NA	-4	True	AAAACA	-22	NA	83048119	83045302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83045956_83046034
ES.28817.7	chr6	-	2391	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	-877	0	-809	0	multi-exon	FALSE	canonical	3	96	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	6367	False	NA	-6	True	AAAACA	-20	NA	83048083	83045304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83046273_83046660
ES.28817.8	chr6	-	2777	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	-807	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	6369	False	NA	-6	True	AAAACA	-20	NA	83048081	83045304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83045300_83048100
ES.28817.9	chr6	-	1320	3	NNC	ENSMUSG00000068327.6	novel	1236	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	44.5	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	7255	False	NA	-6	True	AAAACA	-20	NA	83047195	83045304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83045956_83046034_83046169_83046660
ES.28818.1	chr6	-	1410	1	Antisense	novelGene_ENSMUSG00000069678.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83055132	83053722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_83053700_83055100
ES.28819.1	chr6	-	4536	2	Antisense	novelGene_ENSMUSG00000034968.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTATTTTGATCGTA	4970	False	NA	NA	False	TATAAA	-21	NA	83065399	83060253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_83064005_83064614
ES.28819.2	chr6	-	1166	2	Antisense	novelGene_ENSMUSG00000034968.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATCAGGGCTGATT	4914	False	NA	NA	False	NA	NA	NA	83065455	83063016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_83064005_83065277
ES.2882.1	chr10	-	4144	18	NNC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	42772	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.70800445680386	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTGGTGTTTTGTTTT	NA	False	NA	-1	True	TTTAAA	-22	NA	61066249	61032887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61034739_61036141_61036269_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196
ES.2882.2	chr10	-	5214	22	FSM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	-26	0	-26	0	multi-exon	FALSE	canonical	2	7	junction_20	4.41446807041021	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCCCTTGGTGTTTTGT	4916	False	NA	-4	True	TTTAAA	-19	NA	61109243	61032890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
ES.2882.3	chr10	-	5153	22	NNC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	23	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	6.02865417832322	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGCCCTTGGTGTTTT	4965	False	NA	-6	True	TTTAAA	-17	NA	61109194	61032892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047434_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062881_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
ES.2882.4	chr10	-	4155	18	NIC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	27202	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	5.82323231565392	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGCCCTTGGTGTTTT	NA	False	NA	-6	True	TTTAAA	-17	NA	61081819	61032892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704
ES.2882.5	chr10	-	4109	18	NNC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	27609	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.8440685721573	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTGCCCTTGGTGTTTT	NA	False	NA	-6	True	TTTAAA	-17	NA	61081412	61032892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049304_61049443_61054136_61054313_61057636_61057786_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081347
ES.2882.6	chr10	-	5730	18	NIC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	27194	-4	intron_retention	FALSE	canonical	2	13	junction_3	3.67447004393916	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATTGCCCTTGGTGTT	NA	False	NA	-8	True	TTTAAA	-15	NA	61081827	61032894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704
ES.2882.8	chr10	-	2937	16	NNC	ENSMUSG00000059901.13	novel	5188	22	NA	NA	-45	-12320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.01627422542852	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	5093	False	NA	NA	False	NA	NA	NA	61109066	61046566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61047230_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
ES.2882.9	chr10	-	1281	2	ISM	ENSMUSG00000059901.13	ENSMUST00000120336.2	3645	22	-181	71777	15	-71777	5prime_fragment	FALSE	canonical	3	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGCTTATTTTTATT	4957	False	NA	NA	False	NA	NA	NA	61109202	61106023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_61107037_61108934
ES.28820.1	chr6	+	179	1	Intergenic	novelGene_23968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTGCTTATTT	NA	False	NA	NA	False	NA	NA	NA	83074150	83074329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83074200_83074300
ES.28821.1	chr6	+	4034	10	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-76	-2	intron_retention	FALSE	canonical	2	2	junction_1	314.630451462751	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	157	False	NA	NA	False	ATTAAA	-17	NA	83078521	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83084936_83085071_83086185_83086294_83086408_83086502
ES.28821.10	chr6	+	3749	10	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-15	-2	intron_retention	FALSE	canonical	2	2	junction_2	243.424691120095	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	218	False	NA	NA	False	ATTAAA	-17	NA	83078582	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83084936_83085071_83086185_83086294
ES.28821.11	chr6	+	4488	7	Fusion	ENSMUSG00000107499.2_ENSMUSG00000030037.10	novel	2317	9	NA	NA	3	-4	intron_retention	FALSE	canonical	2	2	junction_1	275.801055513249	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCTATTTTTCTCAGG	220	False	NA	NA	False	ATTAAA	-15	NA	83078584	83086916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084936_83085071_83086408_83086502
ES.28821.12	chr6	+	3337	7	Fusion	ENSMUSG00000107499.2_ENSMUSG00000030037.10	novel	2317	9	NA	NA	809	-2	intron_retention	FALSE	canonical	0	0	junction_5	275.95712227325	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	810	False	NA	NA	False	ATTAAA	-17	NA	83079447	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83079620_83079938_83080251_83080382_83080514_83080592_83080707_83084033_83084254_83084435_83086408_83086502
ES.28821.13	chr6	+	2746	3	ISM	ENSMUSG00000107499.2_ENSMUSG00000030037.10	ENSMUST00000101254.9	2317	9	5177	-1538	-323	-7	intron_retention	FALSE	canonical	3	9	junction_2	1.5	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGCTATTTTTCTC	5121	False	NA	NA	False	ATTAAA	-12	NA	83083758	83086913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83084149_83084435_83084614_83084735
ES.28821.2	chr6	+	4399	7	Fusion	ENSMUSG00000107499.2_ENSMUSG00000030037.10	novel	2317	9	NA	NA	-58	-3	intron_retention	FALSE	canonical	2	2	junction_1	275.205781593015	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTATTTTTCTCAGGT	159	False	NA	NA	False	ATTAAA	-16	NA	83078523	83086917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83086408_83086502
ES.28821.3	chr6	+	3709	11	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-68	0	intron_retention	FALSE	canonical	2	2	junction_2	302.917629067705	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	165	False	NA	NA	False	ATTAAA	-19	NA	83078529	83086920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83084936_83085071_83086185_83086294_83086408_83086502
ES.28821.4	chr6	+	4545	5	Fusion	ENSMUSG00000107499.2_ENSMUSG00000030037.10	novel	2317	9	NA	NA	-29	-2	intron_retention	FALSE	canonical	2	2	junction_1	4.08503365959205	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	188	False	NA	NA	False	ATTAAA	-17	NA	83078552	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83080026_83080100_83080251_83080382_83080707_83084033_83084149_83084435
ES.28821.5	chr6	+	6988	2	Fusion	ENSMUSG00000107499.2_ENSMUSG00000030037.10	novel	710	2	NA	NA	-18	1958	intron_retention	FALSE	canonical	3	12	junction_1	0	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCCACAGCC	199	False	NA	NA	False	NA	NA	NA	83078563	83088878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_83080707_83084033
ES.28821.6	chr6	+	3932	9	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-33	0	intron_retention	FALSE	canonical	2	2	junction_2	327.779270241423	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	200	False	NA	NA	False	ATTAAA	-19	NA	83078564	83086920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83086185_83086294_83086408_83086502
ES.28821.7	chr6	+	3775	11	NNC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-33	-4	intron_retention	FALSE	canonical	0	0	junction_6	303.520361755188	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCTATTTTTCTCAGG	200	False	NA	NA	False	ATTAAA	-15	NA	83078564	83086916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084254_83084435_83084614_83084735_83084936_83085071_83086185_83086294_83086408_83086502
ES.28821.8	chr6	+	3800	10	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-25	-2	intron_retention	FALSE	canonical	2	2	junction_2	314.630451462751	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	208	False	NA	NA	False	ATTAAA	-17	NA	83078572	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83086185_83086294_83086408_83086502
ES.28821.9	chr6	+	3996	8	ISM	ENSMUSG00000107499.2_ENSMUSG00000030037.10	ENSMUST00000101254.9	2317	9	0	-1543	0	-2	intron_retention	FALSE	canonical	2	2	junction_2	3.50509832753866	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATTTTTCTCAGGTT	217	False	NA	NA	False	ATTAAA	-17	NA	83078581	83086918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735
ES.28822.1	chr6	-	2855	1	Genic_Genomic	ENSMUSG00000087578.2	novel	NA	NA	NA	NA	12	421	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTGGATATATGATCCCC	NA	False	NA	NA	False	NA	NA	NA	83086022	83083167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83083200_83086000
ES.28822.2	chr6	-	2290	2	ISM	ENSMUSG00000087578.2	ENSMUST00000125657.2	891	3	-1	-394	-1	394	intron_retention	TRUE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	83086036	83083194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83084172_83084723
ES.28822.3	chr6	-	2497	1	Genic_Genomic	ENSMUSG00000087578.2	novel	NA	NA	NA	NA	-1	49	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	83086036	83083539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83083500_83086000
ES.28822.4	chr6	-	803	3	NIC	ENSMUSG00000087578.2	novel	891	3	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGGGTGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	83086021	83083589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83084172_83084723_83084788_83085864
ES.28823.1	chr6	+	2798	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	-12	-6	-12	6	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTTTAGACAGTTTTG	5161	False	NA	34	True	AATAAA	-23	NA	83092464	83095885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ES.28823.2	chr6	+	2332	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	-11	459	-11	-459	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGAGGTGCCGTGTGG	5162	False	NA	NA	False	TATAAA	-29	NA	83092465	83095420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ES.28823.4	chr6	+	2145	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	0	635	0	-635	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTCTCTTTTTCCTT	5173	False	NA	NA	False	NA	NA	NA	83092476	83095244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ES.28823.5	chr6	+	2546	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	153	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTTGCTTTAGACAG	5178	False	NA	29	True	AATAAA	-18	NA	83092481	83095880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83092908_83093608_83093806_83093957
ES.28823.6	chr6	+	846	2	ISM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	5	2460	5	-913	5prime_fragment	FALSE	canonical	3	327	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTCTAAAGCCTCTGTC	5178	False	NA	NA	False	NA	NA	NA	83092481	83093419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83092908_83092999
ES.28823.7	chr6	+	3227	2	FSM	ENSMUSG00000030036.9	ENSMUST00000145403.3	684	2	-1008	-1535	12	-12	multi-exon	FALSE	canonical	3	345	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCTAACTGACCCC	5185	False	NA	16	True	AATAAA	-5	NA	83092488	83095867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83093806_83093957
ES.28823.8	chr6	+	3136	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	21	-2	intron_retention	FALSE	canonical	3	327	junction_1	9	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCCTTGCTTTAGA	5194	False	NA	26	True	AATAAA	-15	NA	83092497	83095877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83092908_83092999_83093806_83093957
ES.28823.9	chr6	+	2815	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	45	-12	intron_retention	FALSE	canonical	3	308	junction_1	18.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCTAACTGACCCC	5218	False	NA	16	True	AATAAA	-5	NA	83092521	83095867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83093230_83093608_83093806_83093957
ES.28824.1	chr6	+	2953	11	NNC	ENSMUSG00000034930.17	novel	792	5	NA	NA	-10539	-2	intron_retention	FALSE	canonical	0	0	junction_1	22.2272355456094	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTCTTTCACTTGTC	317	False	NA	16	True	ATTAAA	-16	NA	83101904	83129558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83102373_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217
ES.28824.2	chr6	+	182	1	Intergenic	novelGene_23970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGTTGCCTTGGA	4366	False	NA	NA	False	NA	NA	NA	83105953	83106135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83106000_83106100
ES.28824.3	chr6	+	2158	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	32	1	32	-1	multi-exon	FALSE	canonical	3	13	junction_1	17.934223251548	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTCTTTCACTTGTCT	3561	False	NA	17	True	ATTAAA	-17	NA	83112824	83129559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28824.4	chr6	+	3134	12	FSM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	-57	3	-36	-3	multi-exon	FALSE	canonical	0	0	junction_1	21.3022328399382	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	4770	False	NA	15	True	ATTAAA	-15	NA	83114033	83129557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28824.5	chr6	+	2500	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-390	-3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1260	False	NA	15	True	ATTAAA	-15	NA	83118982	83129557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28824.6	chr6	+	2219	12	NNC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-169	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.8916286040816	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	1481	False	NA	14	True	ATTAAA	-14	NA	83119203	83129556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127947_83128058_83128217_83128323_83128866
ES.28824.7	chr6	+	2014	11	NNC	ENSMUSG00000034930.17	novel	2191	12	NA	NA	-1903	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	21.0817456582703	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	1170	False	NA	14	True	ATTAAA	-14	NA	83122912	83129556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126368_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28824.8	chr6	+	1726	10	NIC	ENSMUSG00000034930.17	novel	2191	12	NA	NA	-1901	-4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	22.5361164180938	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCCTTCTTTCACTTG	1172	False	NA	14	True	ATTAAA	-14	NA	83122914	83129556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28824.9	chr6	+	1843	11	NNC	ENSMUSG00000034930.17	novel	2191	12	NA	NA	-1819	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0959711793508	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCCTTCTTTCACTTGT	1254	False	NA	15	True	ATTAAA	-15	NA	83122996	83129557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83123112_83124481_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ES.28825.1	chr6	-	5222	2	FSM	ENSMUSG00000030035.15	ENSMUST00000123394.2	462	2	-151	-4609	-4	4013	multi-exon	FALSE	canonical	2	3	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGGTGGCTCTCAGCTT	NA	False	NA	NA	False	AATAAA	-38	NA	83098391	83092011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83097026_83098183
ES.28825.10	chr6	-	1927	3	NIC	ENSMUSG00000030035.15	novel	1902	4	NA	NA	-31	0	intron_retention	FALSE	canonical	3	121	junction_2	22	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098418	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83097026_83097165_83097858_83098183
ES.28825.12	chr6	-	1429	4	NIC	ENSMUSG00000030035.15	novel	1419	5	NA	NA	-17	0	intron_retention	FALSE	canonical	3	121	junction_3	19.1369334592098	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098404	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83097026_83097165_83097269_83097752_83097858_83098183
ES.28825.13	chr6	-	1355	3	NIC	ENSMUSG00000030035.15	novel	1314	4	NA	NA	-49	-1	intron_retention	FALSE	canonical	3	41	junction_2	62	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTGATTCTGGGTAG	NA	False	NA	-9	True	ATTAAA	-15	NA	83098436	83096026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83097026_83097165_83097269_83098183
ES.28825.14	chr6	-	2070	2	NIC	ENSMUSG00000030035.15	novel	981	5	NA	NA	-40	-3	intron_retention	TRUE	canonical	3	42	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTGTGATTCTGGGT	NA	False	NA	-11	True	ATTAAA	-13	NA	83098427	83096028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83097855_83098183
ES.28825.15	chr6	-	1333	5	NIC	ENSMUSG00000030035.15	novel	1419	5	NA	NA	-46	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	59.8247440445841	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTTGTGATTCTGG	NA	False	NA	-13	True	ATTAAA	-11	NA	83098433	83096030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83096702_83096848_83097026_83097138_83097269_83097752_83097858_83098183
ES.28825.16	chr6	-	1833	5	FSM	ENSMUSG00000030034.13	ENSMUST00000113935.9	1503	5	-141	-189	-141	189	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGAGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	83102553	83098556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ES.28825.17	chr6	-	1321	5	FSM	ENSMUSG00000030034.13	ENSMUST00000113935.9	1503	5	223	-41	-179	41	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGAGTGTGTAAAGTCA	NA	False	NA	31	True	NA	NA	NA	83102189	83098704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ES.28825.18	chr6	-	3038	3	NIC	ENSMUSG00000030034.13	novel	1503	5	NA	NA	-166	-1	intron_retention	FALSE	canonical	3	116	junction_1	0.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTATCGAATTGCTGG	NA	False	NA	-11	True	ATTAAA	-17	NA	83102176	83098746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83101407_83101565_83101759_83101991
ES.28825.19	chr6	-	1406	4	NIC	ENSMUSG00000030034.13	novel	1503	5	NA	NA	-165	-3	intron_retention	FALSE	canonical	3	116	junction_2	3.55902608401044	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGTATCGAATTGCT	NA	False	NA	-13	True	ATTAAA	-15	NA	83102175	83098748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83099346_83100974_83101407_83101565_83101759_83101991
ES.28825.2	chr6	-	1794	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	108	0	-45	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098432	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
ES.28825.20	chr6	-	3160	2	NIC	ENSMUSG00000030034.13	novel	1503	5	NA	NA	-133	-5	intron_retention	FALSE	canonical	3	117	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCTTGTATCGAATTG	NA	False	NA	-15	True	ATTAAA	-13	NA	83102143	83098750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83101759_83101991
ES.28825.5	chr6	-	1295	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	123	1	-30	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098417	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
ES.28825.6	chr6	-	1454	4	NNC	ENSMUSG00000030035.15	novel	1902	4	NA	NA	-23	0	intron_retention	FALSE	canonical	2	5	junction_2	67.4882705858334	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098410	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83097026_83097165_83097269_83097733_83097858_83098183
ES.28825.7	chr6	-	3131	8	Fusion	ENSMUSG00000030035.15_ENSMUSG00000030034.13	novel	1503	5	NA	NA	-110	0	multi-exon	FALSE	canonical	3	41	junction_3	37.4154829896253	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83102522	83096025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ES.28826.1	chr6	-	422	1	Intergenic	novelGene_23969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	83104340	83103918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83103900_83104300
ES.28827.1	chr6	-	1193	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	21	2	3	-2	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTGAGCACTC	9903	False	NA	-2	True	TATAAA	-16	NA	83133358	83129692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
ES.28827.2	chr6	-	1275	11	NNC	ENSMUSG00000030032.15	novel	1216	11	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.2130221979704	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTCCTTGTCTGAGC	9916	False	NA	-6	True	TATAAA	-12	NA	83133345	83129696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132218_83132459_83132523_83132630_83132854_83133156_83133228_83133296
ES.28828.1	chr6	-	2274	1	Antisense	novelGene_ENSMUSG00000030030.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTGTACTTTTGTTTA	3826	False	NA	NA	False	NA	NA	NA	83139435	83137161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_83137200_83139400
ES.28829.1	chr6	+	4335	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	-212	-5	-212	4	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTGGCTCTGAGAG	281	False	NA	NA	False	ATTAAA	-20	NA	83142689	83177103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.100	chr6	+	3071	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-6	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	181.956706541846	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTACGCCATGTCTAATA	5720	False	NA	19	True	AATAAA	-20	NA	83254368	83281921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307_83281608_83281682
ES.28829.101	chr6	+	2190	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-4	683	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	203.263294625834	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCTGGCTCTGAGTGGA	5722	False	NA	6	True	NA	NA	NA	83254370	83281141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.102	chr6	+	1972	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-4	278	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	174.780735653434	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5722	False	NA	9	True	AATAAA	-19	NA	83254370	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83254699_83254770_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.103	chr6	+	2807	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	181.743484655918	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCCATGTCTAATAACTG	5726	False	NA	23	True	AATAAA	-24	NA	83254374	83281925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307_83281566_83281644
ES.28829.104	chr6	+	3171	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_11	174.270144698779	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCATGTCTAATAACTGAG	5728	False	NA	25	True	AATAAA	-26	NA	83254376	83281927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.105	chr6	+	2558	8	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	177.583323357499	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCATGTCTAATAACTGA	5728	False	NA	24	True	AATAAA	-25	NA	83254376	83281926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.106	chr6	+	2808	11	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	219.994113557613	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCATGTCTAATAACTGA	5728	False	NA	24	True	AATAAA	-25	NA	83254376	83281926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307_83281566_83281644
ES.28829.107	chr6	+	1984	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	2	282	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_11	174.270144698779	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAAGTGGCCAGTGGTG	5728	False	NA	13	True	AATAAA	-23	NA	83254376	83280740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.109	chr6	+	3963	11	NNC	ENSMUSG00000068323.13	novel	5039	24	NA	NA	4	276	intron_retention	FALSE	canonical	1	1	junction_9	154.122970384041	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5730	False	NA	7	True	AATAAA	-17	NA	83254378	83280734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83275296_83277521_83280307
ES.28829.11	chr6	+	4232	30	NNC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	11	119725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	120.088294904738	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAAAGACTTGCTTC	504	False	NA	NA	False	NA	NA	NA	83142912	83296824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655_83177100_83221329_83221417_83296787
ES.28829.110	chr6	+	2099	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	4	684	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	140.564575907303	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5730	False	NA	7	True	NA	NA	NA	83254378	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.111	chr6	+	1938	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	6	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	188.816321608555	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACAAATAAGGCAAGTGG	5732	False	NA	4	True	AATAAA	-14	NA	83254380	83280731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274206_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.112	chr6	+	3215	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	204.306193820289	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTTACGCCATGTCTAA	5733	False	NA	17	True	AATAAA	-18	NA	83254381	83281919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.113	chr6	+	3466	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	8	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	146.870663290996	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTACGCCATGTCTA	5734	False	NA	16	True	AATAAA	-17	NA	83254382	83281918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83274366_83276407_83276493_83277452_83277521_83280307_83281566_83281644
ES.28829.114	chr6	+	2265	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	17	684	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_1	111.902850427879	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5743	False	NA	7	True	NA	NA	NA	83254391	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256967_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.115	chr6	+	3130	10	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	19	683	intron_retention	FALSE	canonical	3	81	junction_2	137.035365355169	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCTGGCTCTGAGTGGA	5745	False	NA	6	True	NA	NA	NA	83254393	83281141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83277521_83280307
ES.28829.116	chr6	+	1848	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	20	278	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_10	203.509782086657	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5746	False	NA	9	True	AATAAA	-19	NA	83254394	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.117	chr6	+	2646	11	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	24	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.862451237985	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAATCGTGTCTGCTTA	5750	False	NA	0	True	AATAAA	-1	NA	83254398	83281902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307_83281566_83281644
ES.28829.118	chr6	+	1749	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	29	278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.390244919807	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5755	False	NA	9	True	AATAAA	-19	NA	83254403	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265391_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.119	chr6	+	1819	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	29	276	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	142.777929632288	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5755	False	NA	7	True	AATAAA	-17	NA	83254403	83280734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280355
ES.28829.12	chr6	+	6405	25	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	11	-2	intron_retention	FALSE	canonical	3	372	junction_1	40.5270614322496	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	504	False	NA	NA	False	ATTAAA	-13	NA	83142912	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.120	chr6	+	2174	11	ISM	ENSMUSG00000068323.13	ENSMUST00000113899.8	5039	24	40063	785	45	684	3prime_fragment	FALSE	canonical	3	17	junction_9	149.627704653918	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5771	False	NA	7	True	NA	NA	NA	83254419	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307
ES.28829.122	chr6	+	1899	9	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	50826	784	566	684	3prime_fragment	FALSE	canonical	3	410	junction_6	38.6828046423731	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	NA	False	NA	7	True	NA	NA	NA	83265182	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.123	chr6	+	1111	1	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	15007	276	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	2228	False	NA	7	True	AATAAA	-17	NA	83279623	83280734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83279600_83280700
ES.28829.14	chr6	+	4377	26	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	13	0	intron_retention	FALSE	canonical	3	372	junction_1	41.2119594292725	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	506	False	NA	NA	False	ATTAAA	-15	NA	83142914	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.15	chr6	+	4539	27	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	13	0	intron_retention	FALSE	canonical	3	372	junction_1	39.4139013712392	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	506	False	NA	NA	False	ATTAAA	-15	NA	83142914	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.16	chr6	+	3689	26	NNC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	95.8098617053589	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	510	False	NA	NA	False	ATTAAA	-16	NA	83142918	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172589_83174765_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.18	chr6	+	3790	26	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.721180852259	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	511	False	NA	NA	False	ATTAAA	-15	NA	83142919	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168630_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.19	chr6	+	4015	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	124.26108625913	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGTGTGGCTCTGA	511	False	NA	NA	False	ATTAAA	-17	NA	83142919	83177100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168630_83168701_83169445_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.2	chr6	+	4779	29	NNC	ENSMUSG00000031865.17	novel	652	6	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.890382336436	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	294	False	NA	NA	False	ATTAAA	-15	NA	83142702	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142895_83142976_83143521_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.22	chr6	+	3431	23	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	95.5131530036268	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	515	False	NA	NA	False	ATTAAA	-13	NA	83142923	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172660_83176641
ES.28829.24	chr6	+	3899	27	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	93.7144725582122	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	520	False	NA	NA	False	ATTAAA	-15	NA	83142928	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.26	chr6	+	4635	26	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-2	0	intron_retention	FALSE	canonical	3	372	junction_1	40.1811099896456	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	522	False	NA	NA	False	ATTAAA	-15	NA	83142930	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.29	chr6	+	4899	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_27	120.235000804181	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	523	False	NA	NA	False	ATTAAA	-15	NA	83142931	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176388_83176459_83176655
ES.28829.3	chr6	+	4288	27	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-10	0	intron_retention	FALSE	canonical	3	372	junction_1	40.4348405630707	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	483	False	NA	NA	False	ATTAAA	-15	NA	83142891	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.30	chr6	+	2965	21	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	99.0852536959966	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	523	False	NA	NA	False	ATTAAA	-15	NA	83142931	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171703_83176760
ES.28829.34	chr6	+	4082	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	93.5296876351878	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	525	False	NA	NA	False	ATTAAA	-15	NA	83142933	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172098_83172535_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.37	chr6	+	4097	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	93.6942756199685	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	525	False	NA	NA	False	ATTAAA	-15	NA	83142933	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173094_83174465_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.38	chr6	+	3968	27	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	122.843456451288	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	525	False	NA	NA	False	ATTAAA	-15	NA	83142933	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.40	chr6	+	4066	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	124.285458407119	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	526	False	NA	NA	False	ATTAAA	-13	NA	83142934	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171248_83171418_83171568_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.41	chr6	+	4068	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	92.216331806529	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	526	False	NA	NA	False	ATTAAA	-13	NA	83142934	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174752_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.42	chr6	+	5469	27	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	2	0	intron_retention	FALSE	canonical	3	372	junction_1	40.3934788808129	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	526	False	NA	NA	False	ATTAAA	-16	NA	83142934	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.44	chr6	+	4079	28	NNC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.121980801024	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGGCTCTGAGAGG	530	False	NA	NA	False	ATTAAA	-21	NA	83142938	83177104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160282_83160316_83166058_83166251_83166535_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.45	chr6	+	4071	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	93.1723184899068	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	530	False	NA	NA	False	ATTAAA	-15	NA	83142938	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175624_83176159_83176260_83176655
ES.28829.49	chr6	+	1792	13	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.61370094891	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	538	False	NA	NA	False	ATTAAA	-15	NA	83142946	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160284_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167455_83174863_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.50	chr6	+	4062	28	NNC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	93.6961788809974	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	538	False	NA	NA	False	ATTAAA	-16	NA	83142946	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171562_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.51	chr6	+	4093	29	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	121.998891764789	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	539	False	NA	NA	False	ATTAAA	-15	NA	83142947	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83164745_83164767_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.52	chr6	+	7209	23	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	15	0	intron_retention	FALSE	canonical	3	372	junction_1	42.0773589027568	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	539	False	NA	NA	False	ATTAAA	-16	NA	83142947	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171574_83171655_83171788_83171969_83172673_83172922_83174607_83174737_83176260_83176655
ES.28829.53	chr6	+	4049	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.5967769367581	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTGTCTGTGTGGCTC	547	False	NA	NA	False	ATTAAA	-14	NA	83142955	83177097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167549_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.54	chr6	+	5520	27	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	24	0	intron_retention	FALSE	canonical	3	18	junction_1	91.52886181079	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	548	False	NA	NA	False	ATTAAA	-15	NA	83142956	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.56	chr6	+	4358	28	NIC	ENSMUSG00000031865.17	novel	4292	32	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	92.9345684834464	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	86	False	NA	NA	False	ATTAAA	-15	NA	83156572	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83156888_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.57	chr6	+	4047	27	ISM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	16601	-1	2908	0	3prime_fragment	FALSE	canonical	3	396	junction_14	37.377175581334	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	3016	False	NA	NA	False	ATTAAA	-16	NA	83159502	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.61	chr6	+	3854	26	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	2908	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	94.7446758398592	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	3016	False	NA	NA	False	ATTAAA	-15	NA	83159502	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83159752_83160040_83160120_83160280_83160316_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.62	chr6	+	13442	16	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	2908	0	intron_retention	FALSE	canonical	3	396	junction_10	44.8027776916665	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	3016	False	NA	NA	False	ATTAAA	-16	NA	83159502	83177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83159752_83160040_83160120_83160280_83166728_83166882_83167088_83167184_83167264_83167402_83167780_83167950_83168143_83168226_83168701_83169441_83169603_83169715_83169885_83170688_83171004_83171101_83172673_83172922_83174607_83174737_83175644_83176169_83176260_83176655
ES.28829.63	chr6	+	3718	25	ISM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	17377	2	-2649	-2	3prime_fragment	FALSE	canonical	3	396	junction_12	38.4931451328964	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	3792	False	NA	NA	False	ATTAAA	-13	NA	83160278	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.64	chr6	+	4439	24	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	2373	3	-292	-2	3prime_fragment	FALSE	canonical	3	396	junction_11	39.2871258921999	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	3502	False	NA	NA	False	ATTAAA	-13	NA	83165300	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.65	chr6	+	6356	21	NIC	ENSMUSG00000031865.17	novel	4205	26	NA	NA	117	-2	intron_retention	FALSE	canonical	3	404	junction_11	40.060703937899	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	3911	False	NA	NA	False	ATTAAA	-13	NA	83165709	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83166251_83166529_83166728_83166882_83167088_83167184_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.66	chr6	+	3851	22	NIC	ENSMUSG00000031865.17	novel	4205	26	NA	NA	538	-2	intron_retention	FALSE	canonical	3	396	junction_11	40.7625166843254	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	182	False	NA	NA	False	ATTAAA	-13	NA	83166130	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.67	chr6	+	4750	23	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	966	0	intron_retention	FALSE	canonical	0	0	junction_18	102.317081291283	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	610	False	NA	NA	False	ATTAAA	-15	NA	83166558	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83173184_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.68	chr6	+	5276	21	NIC	ENSMUSG00000031865.17	novel	4205	26	NA	NA	967	-2	intron_retention	FALSE	canonical	3	396	junction_10	40.0881528634084	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	611	False	NA	NA	False	ATTAAA	-13	NA	83166559	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.69	chr6	+	4867	21	NIC	ENSMUSG00000031865.17	novel	4205	26	NA	NA	1103	-1	intron_retention	FALSE	canonical	3	396	junction_10	41.6111763832747	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTGTCTGTGTGGCTC	747	False	NA	NA	False	ATTAAA	-14	NA	83166695	83177097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.7	chr6	+	4105	28	NNC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	93.5296876351878	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGCTGTCTGTGTGGC	503	False	NA	NA	False	ATTAAA	-12	NA	83142911	83177095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171013_83171110_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.70	chr6	+	4735	20	NIC	ENSMUSG00000031865.17	novel	4205	26	NA	NA	1311	-2	intron_retention	FALSE	canonical	3	396	junction_9	42.2229276965572	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGCTGTCTGTGTGGCT	955	False	NA	NA	False	ATTAAA	-13	NA	83166903	83177096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171788_83171969_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.72	chr6	+	3192	8	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	-70	0	intron_retention	FALSE	canonical	3	404	junction_2	55.7131868023493	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	5506	False	NA	NA	False	ATTAAA	-15	NA	83171454	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83171574_83171655_83172096_83172529_83172673_83172922_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.73	chr6	+	4333	3	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	301	0	intron_retention	FALSE	canonical	3	433	junction_1	42.5	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	6436	False	NA	NA	False	ATTAAA	-15	NA	83172384	83177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83172673_83172922_83174607_83174737
ES.28829.74	chr6	+	6027	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	31	28591	31	-12098	intron_retention	FALSE	canonical	0	0	junction_1	0.979120874024455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGCTGTCAAGATGTC	6788	False	NA	NA	False	TATAAA	-18	NA	83214387	83253335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83214745_83217591_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026
ES.28829.75	chr6	+	3740	25	FSM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	194	1189	194	279	multi-exon	FALSE	canonical	0	0	junction_1	237.48204610501	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGGCAAGTGGCCAGTG	6951	False	NA	10	True	AATAAA	-20	NA	83214550	83280737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83214745_83217591_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.76	chr6	+	1912	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-36	278	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_1	111.902850427879	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5690	False	NA	9	True	AATAAA	-19	NA	83254338	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256967_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.77	chr6	+	1989	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-34	278	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5692	False	NA	9	True	AATAAA	-19	NA	83254340	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.78	chr6	+	1936	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	1186	-34	282	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAAGTGGCCAGTGGTG	5692	False	NA	13	True	AATAAA	-23	NA	83254340	83280740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.79	chr6	+	2338	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	784	-34	684	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5692	False	NA	7	True	NA	NA	NA	83254340	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.8	chr6	+	4184	28	NIC	ENSMUSG00000031865.17	novel	4118	28	NA	NA	10	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.8211910680514	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGTGTGGCTCTGA	503	False	NA	NA	False	ATTAAA	-17	NA	83142911	83177100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ES.28829.80	chr6	+	2310	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-34	686	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_10	203.509782086657	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTCTGAGTGGATTG	5692	False	NA	9	True	NA	NA	NA	83254340	83281144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
ES.28829.81	chr6	+	1650	11	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-34	278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.865424271993	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5692	False	NA	9	True	AATAAA	-19	NA	83254340	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83257113_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.82	chr6	+	3122	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39984	0	-34	0	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCATGTCTAATAACTGA	5692	False	NA	24	True	AATAAA	-25	NA	83254340	83281926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.83	chr6	+	1744	12	NNC	ENSMUSG00000068323.13	novel	542	3	NA	NA	-33	276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.998956064988	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5693	False	NA	7	True	AATAAA	-17	NA	83254341	83280734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254395_83254494_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307
ES.28829.84	chr6	+	2926	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-33	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	178.590579374508	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGCCATGTCTAATAACT	5693	False	NA	22	True	AATAAA	-23	NA	83254341	83281924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307_83281566_83281644
ES.28829.85	chr6	+	2999	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-33	-8	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTACGCCATGTCTA	5693	False	NA	16	True	AATAAA	-17	NA	83254341	83281918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.86	chr6	+	3177	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCCATGTCTAATAACTG	5693	False	NA	23	True	AATAAA	-24	NA	83254341	83281925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.87	chr6	+	2211	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-21	684	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5705	False	NA	7	True	NA	NA	NA	83254353	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.88	chr6	+	2376	6	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	39997	12651	-21	3842	internal_fragment	FALSE	canonical	3	368	junction_2	69.8037248289803	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAGAGATGTCTCCAT	5705	False	NA	NA	False	AATAAA	-17	NA	83254353	83269275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755
ES.28829.89	chr6	+	1793	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-14	-1799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	143.314080326515	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAAATCTCTAACTCA	5712	False	NA	NA	False	AAAAAG	-14	NA	83254360	83278659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83278349
ES.28829.90	chr6	+	1825	11	ISM	ENSMUSG00000068323.13	ENSMUST00000113899.8	5039	24	40008	1189	-10	280	3prime_fragment	FALSE	canonical	3	17	junction_9	149.627704653918	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGCAAGTGGCCAGTGG	5716	False	NA	11	True	AATAAA	-21	NA	83254364	83280738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307
ES.28829.91	chr6	+	1862	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-10	276	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	201.525668442812	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5716	False	NA	7	True	AATAAA	-17	NA	83254364	83280734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83254699_83254770_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.92	chr6	+	2383	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-9	684	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	174.780735653434	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTCTGAGTGGAT	5717	False	NA	7	True	NA	NA	NA	83254365	83281142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83254699_83254770_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.93	chr6	+	2167	11	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-9	682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.363929982766	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATCTGGCTCTGAGTGG	5717	False	NA	5	True	NA	NA	NA	83254365	83281140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.94	chr6	+	3119	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.390244919807	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCCATGTCTAATAACTG	5717	False	NA	23	True	AATAAA	-24	NA	83254365	83281925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265248_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.95	chr6	+	1791	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-7	278	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGCAAGTGGCCAGT	5719	False	NA	9	True	AATAAA	-19	NA	83254367	83280736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
ES.28829.96	chr6	+	3008	11	ISM	ENSMUSG00000068323.13	ENSMUST00000113899.8	5039	24	40011	3	-7	-2	3prime_fragment	FALSE	canonical	3	17	junction_9	149.627704653918	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGCCATGTCTAATAACT	5719	False	NA	22	True	AATAAA	-23	NA	83254367	83281924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307
ES.28829.97	chr6	+	3016	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	141.117169598726	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCCATGTCTAATAACTGA	5719	False	NA	24	True	AATAAA	-25	NA	83254367	83281926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307_83281566_83281644
ES.28829.98	chr6	+	2235	5	NIC	ENSMUSG00000068323.13	novel	5039	24	NA	NA	-7	3829	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	194.564256737973	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATAGCAGCTGGA	5719	False	NA	NA	False	AATAAA	-4	NA	83254367	83269262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755
ES.2883.1	chr10	+	218	1	Intergenic	novelGene_2205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATCACAAAACAGGAAG	NA	False	NA	NA	False	NA	NA	NA	61129295	61129513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61129300_61129500
ES.28830.1	chr6	-	173	1	Intergenic	novelGene_23971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	83255393	83255220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83255200_83255400
ES.28831.1	chr6	-	2094	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	-12	3	-12	-3	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCTTGTCTCAGTCA	NA	False	NA	-1	True	AATAAA	-32	NA	83294600	83282675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.11	chr6	-	2020	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-19	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	900.061562520326	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294554	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287487_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.13	chr6	-	1983	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	27	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	897.065033021234	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294508	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288907_83290339_83290529_83294410
ES.28831.14	chr6	-	7367	6	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	11	16	11	-16	intron_retention	FALSE	canonical	3	2400	junction_5	122.839081728903	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294577	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793
ES.28831.15	chr6	-	6024	7	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	12	-16	intron_retention	FALSE	canonical	0	0	junction_6	941.157044989482	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294576	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83289002_83290343
ES.28831.16	chr6	-	2062	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	458	-16	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	880.556062719369	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294077	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83293906
ES.28831.17	chr6	-	3889	6	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	10	-16	intron_retention	FALSE	canonical	3	2400	junction_4	143.771207131331	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTTTCTGAAATGCT	NA	False	NA	-14	True	AATAAA	-19	NA	83294578	83282688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286537_83287393_83287502_83288191_83288345_83288793_83290529_83294410
ES.28831.18	chr6	-	1904	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	11	-17	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	964.229816428059	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCGTTTCTGAAATGC	NA	False	NA	-15	True	AATAAA	-18	NA	83294577	83282689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288793_83288917_83290343_83290529_83294410
ES.28831.2	chr6	-	3498	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	11	-3	intron_retention	FALSE	canonical	3	2400	junction_5	132.940671813491	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCTTGTCTCAGTCA	NA	False	NA	-1	True	AATAAA	-32	NA	83294577	83282675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83290529_83294410
ES.28831.20	chr6	-	2136	9	NNC	ENSMUSG00000005667.9	novel	1421	9	NA	NA	10	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1106.76541665341	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAATGCGTTTCTGAAA	NA	False	NA	-18	True	AATAAA	-15	NA	83294578	83282692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286212_83286294_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.21	chr6	-	5911	7	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	34	22	-19	-22	intron_retention	FALSE	canonical	3	2400	junction_5	112.182019751632	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGAATGCGTTTCTGA	NA	False	NA	-20	True	AATAAA	-13	NA	83294554	83282694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343
ES.28831.22	chr6	-	1809	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	-14	290	-14	-290	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTGTCTGTTTTCT	NA	False	NA	-1	True	TTTAAA	-25	NA	83294602	83282962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.23	chr6	-	1762	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-1074	-294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1137.47552563937	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83290461	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288921_83289603_83289816_83290343
ES.28831.24	chr6	-	2144	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-3	-294	intron_retention	FALSE	canonical	3	2400	junction_4	131.812577379989	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294538	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.25	chr6	-	1819	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	423	-294	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	880.556062719369	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294112	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83293906
ES.28831.27	chr6	-	2646	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	2	-294	intron_retention	FALSE	canonical	3	2400	junction_4	95.7914401186244	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294586	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286041_83286443_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.28	chr6	-	1800	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	12	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	897.065033021234	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294576	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288938_83290343_83290529_83294410
ES.28831.29	chr6	-	5663	7	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	10	294	10	-294	intron_retention	FALSE	canonical	3	2400	junction_5	112.182019751632	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294578	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343
ES.28831.30	chr6	-	1678	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-7	-294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	900.061562520326	1204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTTGTGTGTCTGTT	NA	False	NA	-5	True	TTTAAA	-21	NA	83294542	83282966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287439_83288195_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.31	chr6	-	3018	4	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	139	-296	intron_retention	FALSE	canonical	3	2400	junction_3	23.6220236220354	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGAGTTGTGTGTCTG	NA	False	NA	-7	True	TTTAAA	-19	NA	83289248	83282968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83287502_83288191_83288345_83288793
ES.28831.32	chr6	-	1435	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	2	648	2	63	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCAAGCCTTTGAGTT	NA	False	NA	NA	False	AATACA	-18	NA	83294586	83283320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.33	chr6	-	1204	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	4	877	4	-10	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTTGTATTTATTG	NA	False	NA	-1	True	NA	NA	NA	83294584	83283549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.34	chr6	-	2419	8	NNC	ENSMUSG00000005667.9	novel	495	3	NA	NA	-4	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	900.437784681225	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTTTGCCTGCGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	83294539	83284127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83284788_83285072_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.35	chr6	-	890	5	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	9	4569	9	-708	5prime_fragment	FALSE	canonical	3	2400	junction_2	112.67514144655	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGTCAGTTATGGCT	NA	False	NA	NA	False	AATAAA	-19	NA	83294579	83287241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.36	chr6	-	155	1	Intergenic	novelGene_23972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	83290822	83290667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83290700_83290800
ES.28831.4	chr6	-	3023	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	12	-13	intron_retention	FALSE	canonical	0	0	junction_6	897.065033021234	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTCTGAAATGCTCTT	NA	False	NA	-11	True	AATAAA	-22	NA	83294576	83282685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83289880_83290343_83290529_83294410
ES.28831.5	chr6	-	4707	5	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-1	-13	intron_retention	FALSE	canonical	3	2400	junction_3	116.983973261298	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTCTGAAATGCTCTT	NA	False	NA	-11	True	AATAAA	-22	NA	83294536	83282685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83287502_83288191_83288345_83288793_83290529_83294410
ES.28831.6	chr6	-	2939	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-11	-14	intron_retention	FALSE	canonical	3	2400	junction_4	95.7914401186244	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTTTCTGAAATGCTCT	NA	False	NA	-12	True	AATAAA	-21	NA	83294599	83282686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286041_83286443_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.7	chr6	-	2201	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	11	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	879.649721567091	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGTTTCTGAAATGCTC	NA	False	NA	-13	True	AATAAA	-20	NA	83294577	83282687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287251_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ES.28831.8	chr6	-	2710	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	-3	-15	intron_retention	FALSE	canonical	3	2400	junction_4	128.232427862673	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCGTTTCTGAAATGCTC	NA	False	NA	-13	True	AATAAA	-20	NA	83294538	83282687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83288345_83288793_83288917_83290343_83290529_83294410
ES.28832.1	chr6	-	1669	1	Genic_Genomic	ENSMUSG00000005667.9	novel	NA	NA	NA	NA	-31	-12400	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83302921	83301252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83301300_83302900
ES.28833.1	chr6	+	4412	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	4	-4	2	4	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTATCTACGTCCTTA	NA	False	NA	102	True	ATTAAA	-25	NA	83303001	83320762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ES.28833.11	chr6	+	3959	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	63	390	-1	-389	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAAATGGTTTTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	83303060	83320368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ES.28833.13	chr6	+	4210	6	NIC	ENSMUSG00000043131.15	novel	371	3	NA	NA	-20	-79	intron_retention	FALSE	canonical	1	1	junction_1	124.140243273485	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	83303321	83320678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83303452_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ES.28833.14	chr6	+	4124	2	ISM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	11757	84	11477	-84	3prime_fragment	FALSE	canonical	3	261	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83314818	83320673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83315427_83317157
ES.28833.4	chr6	+	3877	7	NNC	ENSMUSG00000043131.15	novel	2292	7	NA	NA	10	-84	intron_retention	FALSE	non_canonical	0	0	junction_6	116.72569935061	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83303027	83320673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157_83319740_83320159
ES.28833.5	chr6	+	3210	7	FSM	ENSMUSG00000043131.15	ENSMUST00000101245.4	2292	7	-39	-879	10	-84	multi-exon	FALSE	canonical	0	0	junction_6	116.72569935061	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83303027	83320673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157_83317381_83318467
ES.28833.6	chr6	+	4157	5	NIC	ENSMUSG00000043131.15	novel	4412	6	NA	NA	16	-84	intron_retention	FALSE	canonical	0	0	junction_3	139.382567059156	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83303033	83320673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83303250_83306848_83307016_83309435_83309530_83315262_83315427_83317157
ES.28833.7	chr6	+	4190	5	NIC	ENSMUSG00000043131.15	novel	4412	6	NA	NA	-21	-84	intron_retention	FALSE	canonical	0	0	junction_2	119.988541119559	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTGAAGTGTG	NA	False	NA	13	True	AATAAA	-14	NA	83303040	83320673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83303250_83306848_83307016_83311057_83311192_83315262_83315427_83317157
ES.28833.8	chr6	+	4125	5	NIC	ENSMUSG00000043131.15	novel	4412	6	NA	NA	-21	-79	intron_retention	FALSE	canonical	0	0	junction_4	142.74518380667	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	83303040	83320678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83317157
ES.28834.1	chr6	-	356	1	Intergenic	novelGene_23973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAATAACTAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	83305040	83304684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83304700_83305000
ES.28835.1	chr6	+	606	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	-31	1737	-31	3	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCATGCTTCAGGTGC	318	False	NA	29	True	ATTAAA	-29	NA	83326396	83335381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ES.28835.3	chr6	+	1492	4	NNC	ENSMUSG00000045160.15	novel	2312	4	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	479.669330546228	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGATGTGCCATGCTT	371	False	NA	22	True	ATTAAA	-22	NA	83326449	83335374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83326537_83327301_83328372_83330023_83330113_83335128
ES.28835.4	chr6	+	2254	3	FSM	ENSMUSG00000045160.15	ENSMUST00000055875.14	709	3	-1572	27	22	-7	multi-exon	FALSE	canonical	3	998	junction_1	19	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAACAGATGTGCCATG	371	False	NA	19	True	ATTAAA	-19	NA	83326449	83335371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83328372_83330023_83330113_83335128
ES.28835.5	chr6	+	6384	3	FSM	ENSMUSG00000045160.15	ENSMUST00000127769.2	315	3	-52	-6017	22	-33	multi-exon	FALSE	canonical	3	755	junction_1	121.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGACAGCTTTTTTTAAA	371	False	NA	NA	False	NA	NA	NA	83326449	83336196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83326537_83328247_83328372_83330023
ES.28835.6	chr6	+	2250	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	33	29	-12	-29	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAGTTTCA	382	False	NA	NA	False	AATATA	-3	NA	83326460	83337089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ES.28835.7	chr6	+	1005	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	33	1274	-12	-385	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTAGTGTCTGATGCT	382	False	NA	NA	False	NA	NA	NA	83326460	83335844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ES.28835.8	chr6	+	671	5	NNC	ENSMUSG00000045160.15	novel	2312	4	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	507.678293804256	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCATGCTTCAGGTGC	393	False	NA	29	True	ATTAAA	-29	NA	83326471	83335381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83326537_83326870_83327011_83328247_83328372_83330023_83330113_83335128
ES.28836.1	chr6	-	4698	1	Antisense	novelGene_ENSMUSG00000045160.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	83337926	83333228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_83333200_83337900
ES.28837.1	chr6	+	4206	1	Antisense	novelGene_ENSMUSG00000034832.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGGCTCAGTGTGTAA	3459	False	NA	NA	False	NA	NA	NA	83345045	83349251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_83345000_83349300
ES.28838.1	chr6	-	11781	12	FSM	ENSMUSG00000034832.16	ENSMUST00000186548.7	5944	12	-168	-5669	-168	0	multi-exon	FALSE	canonical	1	2	junction_11	3.05595205708575	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTAAGCTTTTTTTT	9169	False	NA	2	True	AATAAA	-27	NA	83433542	83339354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83431731_83432463_83433270
ES.28838.2	chr6	-	10906	11	FSM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	-5	3	-2	-3	multi-exon	FALSE	canonical	2	3	junction_8	2.99332590941915	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTAAGCTTTTT	NA	False	NA	-1	True	AATAAA	-24	NA	83418662	83339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
ES.28838.3	chr6	-	493	1	ISM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	76856	1954	76813	-1954	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGACTGTCCCTGATCT	NA	False	NA	NA	False	AATAAA	-18	NA	83341801	83341308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83341300_83341800
ES.28838.4	chr6	-	5546	11	FSM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	61	5297	18	372	multi-exon	FALSE	canonical	2	3	junction_8	2.99332590941915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCGTAGTTTTAAAATTC	NA	False	NA	NA	False	AAGAAA	-23	NA	83418596	83344651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
ES.28838.5	chr6	-	3641	9	ISM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	70	10224	27	-4555	5prime_fragment	FALSE	canonical	2	3	junction_6	1.96452920568771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAACTCTCAAACTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	83418587	83349578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
ES.28838.6	chr6	-	1521	3	ISM	ENSMUSG00000034832.16	ENSMUST00000056191.2	2523	4	27	5024	-19	1028	5prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAGAAAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	83418633	83380444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83381807_83418198_83418256_83418531
ES.28838.7	chr6	-	3778	2	ISM	ENSMUSG00000034832.16	ENSMUST00000056191.2	2523	4	29	39157	-17	-799	5prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCTGTACTAAGTACA	NA	False	NA	NA	False	NA	NA	NA	83418631	83414577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83418256_83418531
ES.28839.1	chr6	-	6998	1	Genic_Genomic	ENSMUSG00000014554.14	novel	NA	NA	NA	NA	695	899	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTACACACGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	83463297	83456299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83456300_83463300
ES.28839.10	chr6	-	4744	5	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	197	junction_3	11.4318633651737	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483897	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83458445_83463965_83467591_83473667_83473781_83483729
ES.28839.11	chr6	-	945	7	NNC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	77.434739548144	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483882	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464023_83467402_83467591_83473667_83473781_83483729
ES.28839.12	chr6	-	823	5	NIC	ENSMUSG00000014554.14	novel	1007	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	98.6508996411082	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483882	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83483729
ES.28839.13	chr6	-	4936	6	NNC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	84.8872192971357	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCAGTTGTTCGTTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	83483887	83457201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463358_83467591_83473667_83473781_83483729
ES.28839.14	chr6	-	4948	3	ISM	ENSMUSG00000014554.14	ENSMUST00000138941.3	828	7	20429	-89	618	-1	3prime_fragment	FALSE	canonical	3	18	junction_2	2.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCAGTTGTTCGTTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	83463374	83457201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83457419_83458328_83458445_83458759
ES.28839.15	chr6	-	5399	1	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	1391	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATCCAGTTGTTCGTTTA	NA	False	NA	-7	True	AATAAA	-19	NA	83462601	83457202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457200_83462600
ES.28839.16	chr6	-	801	2	FSM	ENSMUSG00000014554.14	ENSMUST00000147060.2	561	2	2	-242	2	242	multi-exon	FALSE	canonical	3	23	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAATCTTAAC	NA	False	NA	NA	False	NA	NA	NA	83483887	83466947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83467591_83483729
ES.28839.17	chr6	-	907	3	ISM	ENSMUSG00000014554.14	ENSMUST00000138941.3	828	7	-88	9668	-2	231	5prime_fragment	FALSE	canonical	3	197	junction_1	15	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83483891	83466958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83467591_83473667_83473781_83483729
ES.28839.2	chr6	-	728	5	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	86.8457684634087	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483875	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83483729
ES.28839.3	chr6	-	956	3	NNC	ENSMUSG00000014554.14	novel	1007	6	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83463977	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83457419_83458328_83458445_83463355
ES.28839.4	chr6	-	1054	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	51	2	-11	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483900	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ES.28839.5	chr6	-	940	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	65	2	3	0	multi-exon	FALSE	canonical	3	23	junction_1	78.3019795407498	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483886	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ES.28839.6	chr6	-	5081	4	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	586	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	90.3487071788462	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83463406	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83458759
ES.28839.7	chr6	-	4390	7	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	3	0	intron_retention	TRUE	canonical	3	8	junction_4	93.7077312119384	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483886	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83458759_83458821_83463965_83467591_83473667_83473781_83483729
ES.28839.8	chr6	-	939	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483898	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
ES.28839.9	chr6	-	1328	5	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	23	junction_4	84.930486281429	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	False	NA	-5	True	AATAAA	-21	NA	83483883	83457200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83457419_83457824_83458445_83463965_83464114_83467402_83467591_83483729
ES.2884.1	chr10	-	175	1	Intergenic	novelGene_2206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGGAAACATATTCG	NA	False	NA	NA	False	NA	NA	NA	61131932	61131757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61131800_61131900
ES.28840.1	chr6	-	2056	9	FSM	ENSMUSG00000059430.15	ENSMUST00000075161.12	1333	9	-728	5	-728	2	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTGTGAGGCTCT	9254	False	NA	NA	False	ATTAAA	-14	NA	83513975	83489891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297_83504460_83513161
ES.28841.1	chr6	-	2073	10	NNC	ENSMUSG00000006906.11	novel	2364	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9546468056113	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATTTGTCTGACCGAGC	NA	False	NA	-4	True	AATAAA	-26	NA	83549448	83520192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533354_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ES.28841.2	chr6	-	2089	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	281	-6	-9	-1	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGAGTGATTTGTCTG	NA	False	NA	-11	True	AATAAA	-19	NA	83549430	83520199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ES.28841.3	chr6	-	2008	11	NNC	ENSMUSG00000006906.11	novel	2364	10	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	11.2694276695846	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGAGTGATTTGTCT	NA	False	NA	-12	True	AATAAA	-18	NA	83549440	83520200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83538748_83538837_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ES.28841.4	chr6	-	3467	10	NNC	ENSMUSG00000006906.11	novel	2152	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.1146783737236	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGAGTGATTTGTCT	NA	False	NA	-12	True	AATAAA	-18	NA	83549399	83520200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83547982
ES.28842.1	chr6	+	3197	1	Genic_Genomic	ENSMUSG00000108660.2	novel	NA	NA	NA	NA	18425	1537	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGTCTCTTTCATTG	NA	False	NA	NA	False	NA	NA	NA	83563445	83566642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_83563400_83566600
ES.28843.1	chr6	+	6268	2	Genic_Genomic	ENSMUSG00002076237.1	novel	466	1	NA	NA	403	6437	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTGCTCAGTCTCATTC	NA	False	NA	NA	False	GGGGCT	-33	NA	83680902	83687402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_83682043_83682274
ES.28844.1	chr6	-	6622	9	NNC	ENSMUSG00000034783.8	novel	1522	6	NA	NA	-11171	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	1.99608992783391	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	83666010	83648190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83648816_83649738_83649858_83651227_83651380_83652554_83652930_83654490_83654608_83654699_83656243_83656441_83657017_83658229_83660333_83664997
ES.28844.10	chr6	-	3796	3	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5990	13	intron_retention	TRUE	non_canonical	0	0	junction_2	61	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	3274	False	NA	2	True	NA	NA	NA	83674535	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83672627_83672710
ES.28844.11	chr6	-	1196	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5530	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	62.8725695355296	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2814	False	NA	2	True	NA	NA	NA	83674995	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672843_83673961_83674051_83674880
ES.28844.12	chr6	-	1119	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5530	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.9135252211262	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2814	False	NA	2	True	NA	NA	NA	83674995	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671333_83671456_83672566_83672606_83672689_83672797_83673961_83674051_83674907
ES.28844.13	chr6	-	2104	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5451	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.6896436842869	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGCTTTGCTTGTGGT	2735	False	NA	1	True	NA	NA	NA	83675074	83669775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672843_83673961
ES.28844.14	chr6	-	1091	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5467	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.6896436842869	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGGACTTTGCTTTGCTT	2751	False	NA	-4	True	NA	NA	NA	83675058	83669780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672797_83674907
ES.28844.15	chr6	-	999	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5451	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.7720464724355	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGGCGGACTTTGCT	2735	False	NA	-10	True	NA	NA	NA	83675074	83669786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83673961_83674051_83674952
ES.28844.16	chr6	-	2281	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5443	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	41.8754767800386	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGGCGGACTTTGCT	2727	False	NA	-10	True	NA	NA	NA	83675082	83669786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961
ES.28844.17	chr6	-	2420	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5425	1	intron_retention	FALSE	canonical	3	98	junction_3	15.6914697279198	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGGCGGACTTTGCT	2709	False	NA	-10	True	NA	NA	NA	83675100	83669786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83674051_83674952
ES.28844.18	chr6	-	1390	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5432	1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	36.2724068680312	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGGCGGACTTTGCT	2716	False	NA	-10	True	NA	NA	NA	83675093	83669786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672939_83673961_83674051_83674952
ES.28844.19	chr6	-	5295	1	NIC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5443	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2727	False	NA	-11	True	NA	NA	NA	83675082	83669787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83669800_83675100
ES.28844.2	chr6	-	3828	7	NNC	ENSMUSG00000034783.8	novel	1522	6	NA	NA	-11254	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1.67497927018681	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTGGTCTGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	83666093	83648190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83648816_83649738_83649858_83651227_83651380_83652554_83652930_83654490_83654608_83654699_83654814_83663767
ES.28844.20	chr6	-	1201	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5462	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.0791835789139	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2746	False	NA	-11	True	NA	NA	NA	83675063	83669787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672825_83674907
ES.28844.22	chr6	-	3288	3	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5454	-4	intron_retention	FALSE	canonical	3	122	junction_1	7	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGATTTAGGCGGACT	2738	False	NA	-15	True	NA	NA	NA	83675071	83669791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566
ES.28844.23	chr6	-	1298	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5450	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	53.9646875280493	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGATTTAGGCGGACT	2734	False	NA	-15	True	NA	NA	NA	83675075	83669791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672825_83673961_83674051_83674907
ES.28844.24	chr6	-	1210	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5461	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	47.5263085038171	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGATTTAGGCGGACT	2745	False	NA	-15	True	NA	NA	NA	83675064	83669791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671333_83671456_83672566_83672797_83673961_83674051_83674952
ES.28844.25	chr6	-	2016	1	Genic_Genomic	ENSMUSG00000085794.6	novel	NA	NA	NA	NA	1913	542	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAAAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	83678612	83676596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83676600_83678600
ES.28844.26	chr6	-	2117	2	FSM	ENSMUSG00000085794.6	ENSMUST00000155159.4	4063	2	-24	1970	-24	3	multi-exon	FALSE	canonical	2	6	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTATGTAGCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	83687938	83679108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83681003_83687715
ES.28844.27	chr6	-	204	1	Intergenic	novelGene_23974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATAAATTTGC	NA	False	NA	NA	False	NA	NA	NA	83682269	83682065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83682100_83682300
ES.28844.3	chr6	-	3456	8	Fusion	ENSMUSG00000034783.8_ENSMUSG00000085794.6	novel	1435	6	NA	NA	5449	-5343	intron_retention	FALSE	non_canonical	0	0	junction_3	58.906012998224	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTCTTCCTGCTGAG	2733	False	NA	NA	False	NA	NA	NA	83675076	83653539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_83654608_83654699_83654814_83656702_83656903_83668940_83669116_83670283_83670449_83671329_83671456_83672566_83674051_83674952
ES.28844.4	chr6	-	1253	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5446	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.9728973019658	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2730	False	NA	2	True	NA	NA	NA	83675079	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672843_83673961_83674051_83674907
ES.28844.5	chr6	-	1211	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5443	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.3915818950801	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2727	False	NA	2	True	NA	NA	NA	83675082	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672843_83673961_83674051_83674952
ES.28844.6	chr6	-	1225	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	-80	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.6896436842869	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	NA	False	NA	2	True	NA	NA	NA	83687994	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672797_83687715
ES.28844.7	chr6	-	1043	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5476	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.4680037499211	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2760	False	NA	2	True	NA	NA	NA	83675049	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672797_83674952
ES.28844.8	chr6	-	1368	6	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5454	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.0158599005479	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2738	False	NA	2	True	NA	NA	NA	83675071	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672606_83672689_83672939_83673961_83674051_83674880
ES.28844.9	chr6	-	3233	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5441	13	intron_retention	TRUE	non_canonical	0	0	junction_3	61.0791835789139	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTTGCTTGTGGTT	2725	False	NA	2	True	NA	NA	NA	83675084	83669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83670449_83671329_83671456_83672566_83672654_83672738
ES.28845.1	chr6	+	1301	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-60	1	-60	-1	multi-exon	FALSE	canonical	3	115	junction_1	5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTGTCCCTGTTC	NA	False	NA	20	True	AATAAA	-31	NA	83688185	83715294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83688526_83710080_83710269_83714521
ES.28845.2	chr6	+	1272	3	NNC	ENSMUSG00000034777.3	novel	1242	3	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.5	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTGTCCCTGTTC	NA	False	NA	20	True	AATAAA	-31	NA	83688207	83715294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83688519_83710080_83710269_83714521
ES.28845.3	chr6	+	3988	2	NNC	ENSMUSG00000034777.3	novel	1242	3	NA	NA	-29	-18757	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGTAGGTAGCATGT	NA	False	NA	NA	False	NA	NA	NA	83688216	83696538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83688526_83692859
ES.28845.4	chr6	+	5514	2	ISM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-20	1	-20	-1	intron_retention	FALSE	canonical	3	115	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTTCTGTCCCTGTTC	NA	False	NA	20	True	AATAAA	-31	NA	83688225	83715294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83688526_83710080
ES.28845.5	chr6	+	1138	4	NNC	ENSMUSG00000034777.3	novel	1242	3	NA	NA	-19	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.9773615097622	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCTGTGTGACACTTGA	NA	False	NA	NA	False	AAGAAA	-19	NA	83688226	83714971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83688526_83710080_83710269_83710517_83710719_83714521
ES.28845.6	chr6	+	1389	4	NNC	ENSMUSG00000034777.3	novel	1242	3	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.9773615097622	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCACTCCCTTCTGTCCC	NA	False	NA	15	True	AATAAA	-26	NA	83688231	83715289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83688526_83710080_83710269_83710517_83710657_83714521
ES.28845.7	chr6	+	2300	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	-14	-1044	-14	1044	multi-exon	FALSE	canonical	3	115	junction_1	5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATAATTAA	NA	False	NA	NA	False	NA	NA	NA	83688231	83716339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83688526_83710080_83710269_83714521
ES.28846.1	chr6	+	1965	14	FSM	ENSMUSG00000006269.8	ENSMUST00000006431.8	1999	14	32	2	-27	-2	multi-exon	FALSE	canonical	0	0	junction_2	1.43498139278289	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGAGCATGTTTTTAATC	3356	False	NA	NA	False	TTTAAA	-18	NA	83720003	83735835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83720185_83726835_83726892_83729088_83729188_83729364_83729459_83729831_83729910_83730748_83730889_83731706_83731809_83732368_83732467_83733169_83733294_83733534_83733686_83733830_83733914_83734832_83734938_83735096_83735227_83735311
ES.28847.1	chr6	+	2515	2	Antisense	novelGene_ENSMUSG00000014748.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGAATGCCCTCTCTTC	9190	False	NA	NA	False	AATAAA	-16	NA	83752242	83760472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_83753209_83758923
ES.28848.1	chr6	-	2995	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	-7	-4	-7	4	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTGTGTGACCAGGG	9705	False	NA	0	True	NA	NA	NA	83752802	83745862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.10	chr6	-	3100	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	233.757652281161	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9751	False	NA	-9	True	NA	NA	NA	83752756	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752240_83752635
ES.28848.11	chr6	-	5078	4	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	526	junction_1	57.8638248150105	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9705	False	NA	-9	True	NA	NA	NA	83752802	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83748428_83750846_83751999_83752080_83752635
ES.28848.12	chr6	-	2788	5	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	302.321331533188	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9741	False	NA	-9	True	NA	NA	NA	83752766	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752694
ES.28848.13	chr6	-	2903	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	232.191817254614	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9729	False	NA	-9	True	NA	NA	NA	83752778	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752694
ES.28848.14	chr6	-	3015	7	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	273.907172028936	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTGAGCTGTAGTGT	9713	False	NA	-10	True	NA	NA	NA	83752794	83745872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83748834_83748873_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.16	chr6	-	1454	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	16	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.07264709367	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTAGGCAGCCT	9751	False	NA	NA	False	NA	NA	NA	83752756	83747376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748409_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.17	chr6	-	2089	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	22	21	intron_retention	FALSE	canonical	3	526	junction_1	52.0696648731293	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTAGGCAGCCT	9789	False	NA	NA	False	NA	NA	NA	83752718	83747376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83748428_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.18	chr6	-	1835	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	-361	1510	-361	21	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTAGGCAGCCT	9351	False	NA	NA	False	NA	NA	NA	83753156	83747376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.19	chr6	-	1470	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	71	21	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	230.235184105297	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTTCTAGGCAGCCT	9838	False	NA	NA	False	NA	NA	NA	83752669	83747376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752513
ES.28848.2	chr6	-	2945	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.07264709367	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTAGTGTGTGACCAGG	9773	False	NA	-1	True	NA	NA	NA	83752734	83745863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748409_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.21	chr6	-	4242	2	ISM	ENSMUSG00000014748.14	ENSMUST00000138192.2	442	3	-53	-3191	2	0	intron_retention	FALSE	canonical	3	664	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9714	False	NA	NA	False	AAAAAG	-38	NA	83752793	83747397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_83750846_83751999
ES.28848.22	chr6	-	2295	4	FSM	ENSMUSG00000014748.14	ENSMUST00000125614.8	2265	4	-32	2	-9	-2	multi-exon	FALSE	canonical	3	553	junction_1	49.358101890391	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	9703	False	NA	NA	False	AAAAAG	-36	NA	83752804	83747399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.23	chr6	-	1254	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	255.470521782847	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	9806	False	NA	NA	False	AAAAAG	-36	NA	83752701	83747399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.24	chr6	-	1133	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	-9	1860	-9	-329	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTTCATCTTCTTCTCT	9703	False	NA	-8	True	AATAAA	-34	NA	83752804	83747726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.25	chr6	-	1708	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	-10	-337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	235.648042639866	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCCAGGAGTTCATCT	9725	False	NA	-16	True	AATAAA	-26	NA	83752782	83747734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83749137_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.26	chr6	-	1016	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	21	-337	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	232.974676735477	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCCAGGAGTTCATCT	9788	False	NA	-16	True	AATAAA	-26	NA	83752719	83747734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752056_83752635
ES.28848.27	chr6	-	3138	4	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	9	-343	intron_retention	FALSE	canonical	3	526	junction_1	57.8638248150105	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTAATACCCCAGGAGT	9776	False	NA	-22	True	AATAAA	-20	NA	83752731	83747740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83748428_83750846_83751999_83752080_83752635
ES.28848.3	chr6	-	3677	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	2	3	intron_retention	FALSE	canonical	3	526	junction_1	52.0696648731293	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTAGTGTGTGACCAGG	9714	False	NA	-1	True	NA	NA	NA	83752793	83745863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83748428_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.5	chr6	-	2878	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	217.49979310335	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCTGTAGTGTGTGAC	9712	False	NA	-5	True	NA	NA	NA	83752795	83745867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750741_83751999_83752080_83752635
ES.28848.8	chr6	-	2786	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	35	-5	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	255.470521782847	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9802	False	NA	-9	True	NA	NA	NA	83752705	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ES.28848.9	chr6	-	2968	6	NNC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	-348	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	234.149183214463	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	9364	False	NA	-9	True	NA	NA	NA	83753143	83745871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752994
ES.28849.1	chr6	-	4118	1	FSM	ENSMUSG00000108525.2	ENSMUST00000206355.2	378	1	-1950	-1790	-1950	1790	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3885	False	NA	NA	False	NA	NA	NA	83771911	83767793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83767800_83771900
ES.2885.1	chr10	+	179	1	Intergenic	novelGene_2208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTGCAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	61154744	61154923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61154700_61154900
ES.28850.1	chr6	+	1382	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	-58	-1	-12	1	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9246	False	NA	12	True	AATAAA	-20	NA	83771951	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.10	chr6	+	1276	11	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	95.9064127157303	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9449	False	NA	12	True	AATAAA	-20	NA	83772154	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774762_83774826_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.11	chr6	+	3428	7	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-15	1	intron_retention	FALSE	canonical	3	202	junction_1	22.1885856541902	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9469	False	NA	12	True	AATAAA	-20	NA	83772174	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83778171_83778479_83778559_83779249
ES.28850.12	chr6	+	3680	7	NIC	ENSMUSG00000034744.14	novel	1323	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	238	junction_3	14.993517117593	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9470	False	NA	11	True	AATAAA	-19	NA	83772175	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.13	chr6	+	1179	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	80.8745408520178	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9470	False	NA	12	True	AATAAA	-20	NA	83772175	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778492_83778559_83779249
ES.28850.14	chr6	+	1292	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9470	False	NA	11	True	AATAAA	-19	NA	83772175	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.15	chr6	+	2666	7	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-13	1	intron_retention	FALSE	canonical	0	0	junction_4	93.6258807998918	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9471	False	NA	12	True	AATAAA	-20	NA	83772176	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83775080_83775525_83776366_83777252_83777346_83778083_83778171_83778479_83778559_83779249
ES.28850.16	chr6	+	1281	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	-12	-220	-12	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9472	False	NA	11	True	AATAAA	-19	NA	83772177	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.17	chr6	+	1267	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.7635857250481	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9474	False	NA	12	True	AATAAA	-20	NA	83772179	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83774053_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.18	chr6	+	165	2	ISM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	170	5534	-10	27	5prime_fragment	FALSE	canonical	3	32	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAGAAAGCAAGCCAT	9474	False	NA	NA	False	NA	NA	NA	83772179	83774002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83772231_83773888
ES.28850.19	chr6	+	1451	9	NIC	ENSMUSG00000034744.14	novel	1049	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	35	junction_1	74.9345547794874	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9488	False	NA	12	True	AATAAA	-20	NA	83772193	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772357_83773888_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.2	chr6	+	2999	9	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-17	1	intron_retention	FALSE	canonical	3	237	junction_1	14.7648230602334	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9287	False	NA	12	True	AATAAA	-20	NA	83771992	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.20	chr6	+	1482	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	5	1	intron_retention	FALSE	canonical	3	11	junction_3	112.001432971433	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9489	False	NA	12	True	AATAAA	-20	NA	83772194	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83774258_83774762_83774826_83774937_83775080_83775464_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.21	chr6	+	1284	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	80.2719144340882	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9489	False	NA	12	True	AATAAA	-20	NA	83772194	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779138
ES.28850.22	chr6	+	3149	6	NIC	ENSMUSG00000034744.14	novel	1918	9	NA	NA	7	1	intron_retention	FALSE	canonical	3	12	junction_3	97.2378527117912	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9491	False	NA	12	True	AATAAA	-20	NA	83772196	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83774258_83774937_83775080_83775464_83775637_83776252_83776366_83777252
ES.28850.23	chr6	+	4295	4	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	202	junction_1	22.69116323349	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9491	False	NA	13	True	AATAAA	-21	NA	83772196	83779538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83777341_83778072_83778559_83779249
ES.28850.24	chr6	+	3542	8	NNC	ENSMUSG00000034744.14	novel	1323	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	11	junction_1	87.482009812397	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9496	False	NA	11	True	AATAAA	-19	NA	83772201	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83774826_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.25	chr6	+	1798	6	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-267	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	100.037193083373	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTAGCAGGGTGTCATC	NA	False	NA	6	True	AATAAA	-14	NA	83774664	83779531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83775080_83775529_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.3	chr6	+	1345	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	59	1	13	1	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9317	False	NA	12	True	AATAAA	-20	NA	83772022	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.4	chr6	+	1412	9	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	202	junction_1	22.6684665339321	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9435	False	NA	12	True	AATAAA	-20	NA	83772140	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ES.28850.5	chr6	+	4593	5	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	202	junction_1	23.9478600296561	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9440	False	NA	11	True	AATAAA	-19	NA	83772145	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83778171_83778479
ES.28850.6	chr6	+	1284	10	NIC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	81.3210373219077	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9442	False	NA	12	True	AATAAA	-20	NA	83772147	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778008_83778171_83778479_83778559_83779249
ES.28850.7	chr6	+	3228	6	NIC	ENSMUSG00000034744.14	novel	1323	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	35	junction_1	91.9447660283064	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9442	False	NA	11	True	AATAAA	-19	NA	83772147	83779536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772357_83773888_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252
ES.28850.8	chr6	+	1856	1	FSM	ENSMUSG00000034744.14	ENSMUST00000205681.2	752	1	-1076	-28	5	28	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAAGCAAGCCATC	9442	False	NA	NA	False	NA	NA	NA	83772147	83774003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83772100_83774000
ES.28850.9	chr6	+	1558	9	NIC	ENSMUSG00000034744.14	novel	1049	10	NA	NA	8	1	intron_retention	FALSE	canonical	1	1	junction_6	106.062481585149	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	9445	False	NA	12	True	AATAAA	-20	NA	83772150	83779537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83772357_83773888_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778008_83778171_83778479_83778559_83779249
ES.28851.1	chr6	+	1730	1	Intergenic	novelGene_23975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATTCTTCTCTTTCTTG	NA	False	NA	NA	False	AATATA	-18	NA	83787877	83789607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83787900_83789600
ES.28852.1	chr6	+	2693	1	Intergenic	novelGene_23977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAGGTCAATTATTAC	2734	False	NA	NA	False	AATAAA	-5	NA	83797984	83800677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83798000_83800700
ES.28852.2	chr6	+	3108	1	Intergenic	novelGene_23978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATAGTCTACTTGTAC	2734	False	NA	NA	False	NA	NA	NA	83797984	83801092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83798000_83801100
ES.28853.1	chr6	-	3712	1	Genic_Genomic	ENSMUSG00000045896.15	novel	NA	NA	NA	NA	1331	245	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAACTTTTTTTTTTC	NA	False	NA	NA	False	AATGAA	-23	NA	83785849	83782137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_83782100_83785800
ES.28853.10	chr6	-	178	1	Intergenic	novelGene_23976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	83788762	83788584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83788600_83788800
ES.28853.2	chr6	-	3968	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	15	-1	-13	1	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGCCTCTGTCTATCA	NA	False	NA	NA	False	AATAAA	-14	NA	83808708	83782381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ES.28853.3	chr6	-	3352	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	-14	644	-14	-644	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTATGTCAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	83808737	83783026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ES.28853.4	chr6	-	3448	6	NNC	ENSMUSG00000045896.15	novel	3982	5	NA	NA	11	-657	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.8766418786038	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	83808671	83783039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83785875_83786880_83787058_83791703_83791852_83800490_83800666_83808252_83808311_83808616
ES.28853.5	chr6	-	3569	7	NNC	ENSMUSG00000045896.15	novel	3982	5	NA	NA	1	-657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.0288354937731	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAGGTTATTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	83808694	83783039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_83785875_83786880_83787058_83791703_83791852_83799839_83799938_83800490_83800666_83808252_83808311_83808616
ES.28853.6	chr6	-	7975	4	NIC	ENSMUSG00000045896.15	novel	3982	5	NA	NA	-8	-661	intron_retention	FALSE	canonical	3	74	junction_3	1.69967317119759	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTTTCCAGGTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	83808731	83783043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83785875_83786880_83791852_83808252_83808311_83808616
ES.28853.7	chr6	-	3218	4	NIC	ENSMUSG00000045896.15	novel	3982	5	NA	NA	4	-661	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	38.212854149124	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTTTCCAGGTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	83808678	83783043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_83785875_83786880_83787058_83791703_83791852_83808616
ES.28854.1	chr6	-	178	1	Intergenic	novelGene_23979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	83820956	83820778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83820800_83821000
ES.28855.1	chr6	+	302	2	Intergenic	novelGene_23980	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGACAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	83822185	83822540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83822327_83822379
ES.28856.1	chr6	-	179	1	Intergenic	novelGene_23981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAATTTTGTGGTT	6292	False	NA	NA	False	NA	NA	NA	83825451	83825272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83825300_83825500
ES.28857.1	chr6	+	177	1	Intergenic	novelGene_23982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCAAAACTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	83829913	83830090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83829900_83830100
ES.28858.1	chr6	-	199	1	Intergenic	novelGene_23983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTATATATAAAACAAC	9831	False	NA	NA	False	AATAAA	-17	NA	83835291	83835092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83835100_83835300
ES.28859.1	chr6	+	173	1	Intergenic	novelGene_23984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGGAGCAAGCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	83838561	83838734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83838600_83838700
ES.2886.1	chr10	+	270	1	Intergenic	novelGene_2209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	61161188	61161458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61161200_61161500
ES.28860.1	chr6	+	178	1	Intergenic	novelGene_23985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	1084	False	NA	NA	False	NA	NA	NA	83842730	83842908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83842700_83842900
ES.28861.1	chr6	-	180	1	Intergenic	novelGene_23986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAGTAAACCTT	1579	False	NA	NA	False	NA	NA	NA	83843543	83843363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83843400_83843500
ES.28862.1	chr6	+	1712	1	Genic_Genomic	ENSMUSG00000030016.15	novel	NA	NA	NA	NA	-51	-47127	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACAGTATTACATGCT	2393	False	NA	NA	False	NA	NA	NA	83844039	83845751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_83844000_83845800
ES.28862.10	chr6	+	4285	25	NIC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	102.098595797831	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2463	False	NA	NA	False	AATAAA	-22	NA	83844109	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83844225_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.100	chr6	+	6484	25	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5444104853863	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891372	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905313_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.101	chr6	+	4423	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	-2	intron_retention	FALSE	canonical	2	14	junction_19	105.532742417802	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891372	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.103	chr6	+	6312	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.5736032185979	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891372	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83912024_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.105	chr6	+	4170	24	NNC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	96.9623901519025	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891373	83963852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956825_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.106	chr6	+	4594	24	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_3	109.157644278117	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891373	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919872_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.107	chr6	+	4959	20	ISM	ENSMUSG00000030016.15	ENSMUST00000113835.10	4356	26	5	13134	0	4506	5prime_fragment	FALSE	canonical	3	19	junction_11	72.5179125832326	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTTTGTTTCTCATT	NA	False	NA	NA	False	AGTAAA	-27	NA	83891376	83950719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227
ES.28862.108	chr6	+	7005	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	-369	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	101.640479053616	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTATCTACATGAC	NA	False	NA	NA	False	AATAAA	-13	NA	83891376	83966163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.109	chr6	+	4891	21	ISM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	3	13049	0	4369	5prime_fragment	FALSE	canonical	3	182	junction_11	47.9198288811636	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATATGGCCACAGTATT	NA	False	NA	NA	False	NA	NA	NA	83891376	83950582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227
ES.28862.11	chr6	+	6196	25	NNC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	15376	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	95.2829029638698	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83859467	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83859586_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.110	chr6	+	4303	25	NNC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	101.040833329897	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891376	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958650_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.112	chr6	+	4542	25	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	108.718474038326	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891376	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.113	chr6	+	6367	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	122.741514125991	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891376	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83930858_83930970_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953192_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.114	chr6	+	6277	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	90.385963512041	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTTGTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	83891376	83963850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958650_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.115	chr6	+	4193	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	100.441059333322	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891376	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956282_83960957_83961057_83961758_83961878_83963539
ES.28862.116	chr6	+	6028	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	96.4002564923758	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891376	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.117	chr6	+	6211	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	87.2398582469104	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTCAACACTGTTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	83891379	83963843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956335_83956426_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.119	chr6	+	6018	23	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	92.8813003268862	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891384	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.12	chr6	+	6343	27	NNC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	15378	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	88.6374171328132	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83859469	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83859586_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.120	chr6	+	5321	28	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_22	89.9678955084658	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891392	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.121	chr6	+	6331	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	88.2406271737892	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891404	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953140_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.122	chr6	+	4267	25	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	111.355591275577	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891405	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.124	chr6	+	3946	24	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_10	103.221475323035	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83905850	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.125	chr6	+	5974	26	NNC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	89.9539081974763	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83905881	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923204_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.127	chr6	+	5046	25	NNC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	628	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	111.468979242358	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83906464	83963852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953192_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.128	chr6	+	8423	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	634	248	intron_retention	FALSE	canonical	3	109	junction_21	67.2966071457791	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGTTAGAAAACTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	83906470	83964101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.13	chr6	+	6449	28	NNC	ENSMUSG00000030016.15	novel	3822	25	NA	NA	15378	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	91.3644775832509	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83859469	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83859586_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.130	chr6	+	246	1	Intergenic	novelGene_23991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTCTAGTGAACTATAG	NA	False	NA	NA	False	NA	NA	NA	83913543	83913789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83913500_83913800
ES.28862.131	chr6	+	4617	23	ISM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	28465	2681	192	0	3prime_fragment	FALSE	canonical	3	162	junction_20	71.5446026286348	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	5431	False	NA	NA	False	AATAAA	-20	NA	83919813	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.132	chr6	+	1973	19	ISM	ENSMUSG00000030016.15	ENSMUST00000203891.3	3968	24	17360	2	-1683	0	3prime_fragment	FALSE	canonical	3	40	junction_16	94.7751074262347	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	8814	False	NA	NA	False	AATAAA	-20	NA	83923196	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.133	chr6	+	3602	17	NIC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	5469	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	110.683600298328	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83930348	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.134	chr6	+	3227	15	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	138.846780918495	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83938956	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956414_83956521_83956721_83956828_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.135	chr6	+	6447	11	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-72	0	intron_retention	FALSE	canonical	1	1	junction_7	121.744363319211	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83938956	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83954412_83955003_83955070_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.136	chr6	+	3180	11	ISM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	52053	-218	855	-2	3prime_fragment	FALSE	canonical	3	109	junction_7	97.0435469261094	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83943426	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.137	chr6	+	2982	9	NNC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	1703	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	124.580295392169	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83944274	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961822_83963539
ES.28862.138	chr6	+	6218	6	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-6190	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	133.738550911844	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83950401	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.139	chr6	+	5501	3	FSM	ENSMUSG00000030016.15	ENSMUST00000204378.2	904	3	-4595	-2	-603	0	multi-exon	FALSE	canonical	3	422	junction_1	29.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2114	False	NA	NA	False	AATAAA	-22	NA	83955988	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83961057_83961758_83961878_83963539
ES.28862.14	chr6	+	221	1	Intergenic	novelGene_23987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTATGCTGCTGCTTT	3508	False	NA	53	True	NA	NA	NA	83870928	83871149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_83870900_83871100
ES.28862.140	chr6	+	5645	4	ISM	ENSMUSG00000030016.15	ENSMUST00000203324.3	3822	25	51212	-3642	457	715	3prime_fragment	FALSE	canonical	3	230	junction_1	107.158242281632	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAAAGGAAATAAAT	3174	False	NA	NA	False	NA	NA	NA	83957048	83967247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.141	chr6	+	1946	1	NIC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	8031	False	NA	NA	False	AATAAA	-20	NA	83961905	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83961900_83963900
ES.28862.142	chr6	+	6816	55	FSM	ENSMUSG00000033788.16	ENSMUST00000113823.8	6578	55	-98	-140	14	-5	multi-exon	TRUE	canonical	0	0	junction_1	2.23399658476479	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTGCTATGTGTC	7295	False	NA	NA	False	TATAAA	-15	NA	83985585	84188018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83985985_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041452_84041546_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ES.28862.143	chr6	+	6700	56	FSM	ENSMUSG00000033788.16	ENSMUST00000203695.3	6504	56	-9	-187	-9	3	multi-exon	FALSE	canonical	0	0	junction_3	2.17316465738314	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATGTGTCTACAGTTC	NA	False	NA	NA	False	TATAAA	-23	NA	83996357	84188026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83996591_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041452_84041546_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ES.28862.144	chr6	+	5826	26	NNC	ENSMUSG00000033788.16	novel	6803	55	NA	NA	-40559	2766	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	2.02543822418755	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTAGCTGTTCTATAGT	NA	False	NA	NA	False	AATAAA	-15	NA	84041795	84096627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84095332_84095888
ES.28862.145	chr6	+	6418	50	NNC	ENSMUSG00000033788.16	novel	6432	55	NA	NA	-40553	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.31846076270549	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGCTATGTGTCTACA	NA	False	NA	NA	False	TATAAA	-19	NA	84041801	84188022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84074689_84074806_84075134_84075249_84076057_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84134120_84134184_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ES.28862.146	chr6	+	5484	45	ISM	ENSMUSG00000033788.16	ENSMUST00000204987.3	6474	56	53245	-202	-32743	0	3prime_fragment	FALSE	canonical	0	0	junction_29	2.32040891238186	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCTGAATGAGCGAGAC	NA	False	NA	NA	False	TATAAA	-38	NA	84049611	84188041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84134120_84134184_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ES.28862.147	chr6	+	3158	26	NNC	ENSMUSG00000033788.16	novel	6571	54	NA	NA	9604	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2.48644324286721	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATTGCTATGTGTC	4180	False	NA	NA	False	TATAAA	-15	NA	84093136	84188018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129383_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ES.28862.148	chr6	+	177	1	Intergenic	novelGene_23995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGGAAAA	2629	False	NA	NA	False	NA	NA	NA	84157382	84157559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_84157400_84157600
ES.28862.15	chr6	+	4234	27	NNC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	99.8486132208664	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891307	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.16	chr6	+	4412	26	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_22	83.1527365755331	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891321	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.17	chr6	+	6139	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-22	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	86.4435521751935	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACACTGTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	83891326	83963848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.18	chr6	+	3618	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_19	109.488862283262	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891327	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.19	chr6	+	6377	27	FSM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	-21	2677	-21	2	multi-exon	FALSE	canonical	3	28	junction_1	85.3890158256238	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTTGTGTTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	83891327	83963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.2	chr6	+	6293	27	NNC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	-46	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.89402639657	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTTGTGTTGATT	2398	False	NA	NA	False	AATAAA	-24	NA	83844044	83963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83844105_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.20	chr6	+	4151	23	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_20	89.2674155983207	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891327	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.21	chr6	+	6467	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-46	-222	-21	0	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891327	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.22	chr6	+	4470	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	92.818689775269	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891327	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956825_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.23	chr6	+	6365	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_24	66.2109436064344	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891327	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.24	chr6	+	6646	29	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.071762405996	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891330	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905313_83905496_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.25	chr6	+	6309	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	77.5262123413752	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891332	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.26	chr6	+	6206	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	72.2910782877113	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTTGTGTTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	83891335	83963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.27	chr6	+	5224	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_21	90.9460142875591	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTTGTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	83891339	83963850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.28	chr6	+	5036	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	249	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	95.3567497465293	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGTTAGAAAACTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	83891341	83964102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.29	chr6	+	4273	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	108.422879089513	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891341	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919998_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956825_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.3	chr6	+	4688	25	NNC	ENSMUSG00000030016.15	novel	798	10	NA	NA	-34	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.870637694201	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCAACACTGTTGTGT	2410	False	NA	NA	False	AATAAA	-13	NA	83844056	83963844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83844105_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.30	chr6	+	6261	29	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	89.7186930218615	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891341	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.31	chr6	+	2878	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	99.6226125463268	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTTGTGTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	83891341	83963852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.32	chr6	+	4239	24	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_20	89.841343037126	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891341	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.33	chr6	+	4354	26	NNC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	90.0553962847313	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891341	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956825_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.34	chr6	+	3655	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_20	116.908278577695	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891341	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919872_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.35	chr6	+	5269	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_22	87.1255640172587	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891342	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.36	chr6	+	6548	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-6	249	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	77.5262123413752	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGTTAGAAAACTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	83891342	83964102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.37	chr6	+	4289	25	NIC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_22	82.4636283460775	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891342	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.38	chr6	+	4296	25	NIC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.3430416816173	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891343	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.39	chr6	+	6511	29	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	103.541787630475	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891343	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83959988_83960049_83960957_83961057_83961758_83961878_83963539
ES.28862.4	chr6	+	4281	26	NNC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.284376808717	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2410	False	NA	NA	False	AATAAA	-22	NA	83844056	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83844105_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.41	chr6	+	6699	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-29	-471	-4	249	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGTTAGAAAACTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	83891344	83964102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.42	chr6	+	4320	25	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	97.2392524766733	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891344	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.43	chr6	+	7794	27	FSM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	-4	1243	-4	-1243	multi-exon	FALSE	canonical	3	28	junction_1	85.3890158256238	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTGCCGTGGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	83891344	83965289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.44	chr6	+	5968	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	87.2398582469104	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891344	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83953710_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.45	chr6	+	6460	28	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	88.3838430014429	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891344	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.46	chr6	+	6456	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	84.1089501818081	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891349	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958650_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.47	chr6	+	5292	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	14	junction_21	102.193726286439	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891350	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.48	chr6	+	6099	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	96.0272166177951	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891350	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.49	chr6	+	4776	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	95.3567497465293	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891350	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.5	chr6	+	4982	27	NIC	ENSMUSG00000030016.15	novel	798	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.3427545259149	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2416	False	NA	NA	False	AATAAA	-22	NA	83844062	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83844225_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.50	chr6	+	5280	23	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_19	118.98813226467	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891350	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83946222_83949227_83949266_83955003_83955070_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.51	chr6	+	4829	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.466943317285	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891350	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.52	chr6	+	6150	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	86.9882605642538	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891350	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.53	chr6	+	4504	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	102.522458027498	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891350	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83955003_83955070_83955975_83956282_83960957_83961057_83961758_83961878_83963539
ES.28862.54	chr6	+	4681	24	NIC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	96.769247876552	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891351	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.55	chr6	+	3970	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	125.882770382951	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891351	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83958665_83958768_83959645_83959765_83960957_83961057_83961758_83961878_83963539
ES.28862.56	chr6	+	10182	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	19	junction_11	83.3421245362885	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAACACTGTTGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	83891351	83963845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.57	chr6	+	4459	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	105.913579821157	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTGTTTGTGTTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	83891352	83963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956825_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.58	chr6	+	6196	25	NIC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	91.9737186948291	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891353	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.6	chr6	+	4656	26	NIC	ENSMUSG00000030016.15	novel	3822	25	NA	NA	-2	248	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	101.6	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTGTTAGAAAACTTT	2442	False	NA	NA	False	AGTAAA	-17	NA	83844088	83964101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83844225_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.60	chr6	+	4667	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	110.117798742983	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891353	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.62	chr6	+	5992	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	93.3761939682701	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891353	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906663_83906854_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.63	chr6	+	6965	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	0	intron_retention	FALSE	canonical	3	41	junction_1	96.3434114512078	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891353	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83961057_83961758_83961878_83963539
ES.28862.64	chr6	+	5805	29	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.9505533102289	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891353	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83906066_83906701_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.66	chr6	+	8113	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	-2	intron_retention	FALSE	canonical	3	109	junction_23	72.0625652721957	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891355	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.67	chr6	+	6203	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	101.741758681151	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891355	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83953499_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.68	chr6	+	6241	17	NIC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	1	4359	intron_retention	FALSE	canonical	3	41	junction_1	87.9887910119806	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAGGATATGG	NA	False	NA	NA	False	NA	NA	NA	83891356	83950572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098
ES.28862.69	chr6	+	2693	24	NNC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	131.171945914838	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891356	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83932579_83932662_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83960957_83961057_83961758_83961878_83963539
ES.28862.7	chr6	+	4707	25	NNC	ENSMUSG00000030016.15	novel	798	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.683438117257	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2446	False	NA	NA	False	AATAAA	-22	NA	83844092	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83844225_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921874_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.70	chr6	+	8748	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	-17	-2532	1	-369	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTATCTACATGAC	NA	False	NA	NA	False	AATAAA	-13	NA	83891356	83966163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.71	chr6	+	4343	26	NNC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	123.581189507141	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	83891356	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956828_83956892_83958665_83958768_83959988_83960049_83960957_83961057_83961758_83961878_83963539
ES.28862.72	chr6	+	5206	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_20	96.5089343014417	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891356	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.73	chr6	+	6414	23	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_20	90.3732046333562	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891356	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83961057_83961758_83961878_83963539
ES.28862.74	chr6	+	3542	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_18	112.445273393356	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891356	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.75	chr6	+	4124	23	NNC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	122.768419028445	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891356	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923204_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ES.28862.76	chr6	+	4919	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	105.143857496436	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891356	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955009_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.77	chr6	+	6226	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	87.2398582469104	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891356	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.78	chr6	+	6330	29	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	89.9505533102289	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891356	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.79	chr6	+	3981	22	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	113.361161049396	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891358	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83960957_83961057_83961758_83961878_83963539
ES.28862.8	chr6	+	6460	28	NIC	ENSMUSG00000030016.15	novel	3822	25	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	91.1292664838061	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	2451	False	NA	NA	False	AATAAA	-22	NA	83844097	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83844225_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.80	chr6	+	6431	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	3	250	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	72.2910782877113	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTTAGAAAACTTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	83891358	83964103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.81	chr6	+	4931	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.502663971942	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891358	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83917778_83917889_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.82	chr6	+	6654	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.89402639657	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891359	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905313_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.83	chr6	+	6360	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	4	34967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	87.2398582469104	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAATAAGCCAAGGG	NA	False	NA	NA	False	AATAAA	-9	NA	83891359	84001499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539_83963848_84001466
ES.28862.84	chr6	+	3674	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	114.305107497434	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891359	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956825_83960957_83961057_83961758_83961878_83963539
ES.28862.85	chr6	+	6414	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	89.5829998079733	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891359	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933724_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.86	chr6	+	6319	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	87.7285687512792	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTTGTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	83891361	83963850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953192_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.87	chr6	+	6446	28	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.716467468492	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891361	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83903060_83903176_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.88	chr6	+	4669	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	127.454311814077	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891361	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919998_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936911_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.89	chr6	+	6364	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	85.9480027202356	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891361	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.9	chr6	+	6349	27	NIC	ENSMUSG00000030016.15	novel	3968	24	NA	NA	11	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	88.3817365802842	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACACTGTTGTGTTTGTG	2456	False	NA	NA	False	AATAAA	-18	NA	83844102	83963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83844225_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.90	chr6	+	6247	27	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	87.9841298223249	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891361	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953267_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.91	chr6	+	4529	25	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	6	247	combination_of_known_junctions	FALSE	canonical	3	24	junction_20	97.2458225323844	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGTGTTAGAAAACTT	NA	False	NA	NA	False	AGTAAA	-16	NA	83891361	83964100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956828_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.92	chr6	+	4360	26	NNC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	100.841261396315	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891362	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953192_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.94	chr6	+	6079	26	NNC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	107.760890864914	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891362	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956721_83956828_83956892_83960957_83961057_83961758_83961878_83963539
ES.28862.95	chr6	+	1257	6	NIC	ENSMUSG00000030016.15	novel	2806	12	NA	NA	7	1971	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	106.150082430491	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATGATTTCTCTTG	NA	False	NA	NA	False	AATAAA	-13	NA	83891362	83923672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198
ES.28862.96	chr6	+	8682	24	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	7	0	intron_retention	FALSE	canonical	3	41	junction_1	96.7367171169423	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891362	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.97	chr6	+	6232	26	NNC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	109.592948678279	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891362	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919872_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.98	chr6	+	3835	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_21	103.71938130924	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTTGTGTTTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	83891365	83963851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28862.99	chr6	+	4376	26	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	98.9705734044216	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891367	83963853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ES.28863.1	chr6	-	1633	1	Intergenic	novelGene_23988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAGTTCAGAAAGACTAA	NA	False	NA	NA	False	NA	NA	NA	83894713	83893080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83893100_83894700
ES.28863.2	chr6	-	158	1	Intergenic	novelGene_23989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACATCTATATGATGAG	NA	False	NA	NA	False	AAAAAG	-5	NA	83893555	83893397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83893400_83893600
ES.28864.1	chr6	-	178	1	Intergenic	novelGene_23990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGCAATTTGTAAC	3641	False	NA	NA	False	NA	NA	NA	83903524	83903346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83903300_83903500
ES.28865.1	chr6	-	157	1	Intergenic	novelGene_23992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83940873	83940716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_83940700_83940900
ES.28866.1	chr6	-	195	1	Intergenic	novelGene_23993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCGCATTTGCATA	NA	False	NA	NA	False	NA	NA	NA	84013193	84012998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84013000_84013200
ES.28867.1	chr6	-	1348	1	Intergenic	novelGene_23994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTATTTTTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	84067257	84065909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84065900_84067300
ES.28868.1	chr6	-	156	1	Intergenic	novelGene_23996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	8450	False	NA	NA	False	NA	NA	NA	84580523	84580367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84580400_84580500
ES.28869.1	chr6	+	4859	1	Intergenic	novelGene_24000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAAATTTAGTAGCAG	NA	False	NA	NA	False	NA	NA	NA	84913639	84918498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_84913600_84918500
ES.2887.1	chr10	+	176	2	Antisense	novelGene_ENSMUSG00000112875.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCAAACAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	61162032	61282013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61162134_61281938
ES.2887.10	chr10	+	1411	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	311	373	311	-373	multi-exon	FALSE	canonical	3	289	junction_2	2.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATCTGTAACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	61254061	61260744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61254275_61258760_61259477_61260262
ES.2887.11	chr10	+	5603	2	ISM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	977	1	977	-1	3prime_fragment	FALSE	canonical	3	289	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCTCACAATGTGT	NA	False	NA	19	True	ATTAAA	-16	NA	61254727	61261116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61259477_61260262
ES.2887.12	chr10	+	1694	3	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	1066	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	142	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGTCTCACAATGT	NA	False	NA	17	True	ATTAAA	-14	NA	61254816	61261114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61254943_61258760_61259477_61260262
ES.2887.13	chr10	+	1746	3	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	1367	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	139.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61255117	61261117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61255293_61258760_61259477_61260262
ES.2887.14	chr10	+	3256	3	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	2073	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCTCACAATGTGT	NA	False	NA	19	True	ATTAAA	-16	NA	61255823	61261116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61257260_61258510_61259477_61260262
ES.2887.15	chr10	+	178	1	Intergenic	novelGene_2218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACCCAAACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	61281834	61282012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61281800_61282000
ES.2887.2	chr10	+	187	1	Intergenic	novelGene_2210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	61162032	61162219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61162000_61162200
ES.2887.3	chr10	+	218	1	Intergenic	novelGene_2212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGATGTTTATTT	NA	False	NA	NA	False	AAAAAG	-12	NA	61194992	61195210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61195000_61195200
ES.2887.4	chr10	+	178	1	Intergenic	novelGene_2214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	61232849	61233027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61232800_61233000
ES.2887.5	chr10	+	962	3	Intergenic	novelGene_2216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	20	junction_1	1	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTCAAATTCTCAATAA	NA	False	NA	NA	False	NA	NA	NA	61251920	61253513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61252425_61252865_61252988_61253177
ES.2887.7	chr10	+	1853	4	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	-69	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.429577925892	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCTCACAATGTGT	NA	False	NA	19	True	ATTAAA	-16	NA	61253681	61261116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61253806_61254115_61254275_61258760_61259477_61260262
ES.2887.8	chr10	+	1852	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	251	-8	251	8	multi-exon	FALSE	canonical	3	289	junction_2	2.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATGTGTTTCTAGGTT	NA	False	NA	28	True	ATTAAA	-25	NA	61254001	61261125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61254275_61258760_61259477_61260262
ES.2887.9	chr10	+	1137	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	311	647	311	-647	multi-exon	FALSE	canonical	3	289	junction_2	2.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACTCCATTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	61254061	61260470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61254275_61258760_61259477_61260262
ES.28870.1	chr6	-	9020	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	11	-3592	0	3592	multi-exon	TRUE	canonical	3	201	junction_13	26.9684454901315	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCTCTTATATATAATG	NA	False	NA	NA	False	AATAAA	-24	NA	85046484	84591876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.10	chr6	-	5079	20	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	66188	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.3244223579526	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	84980251	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830046_84830134_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176
ES.28870.11	chr6	-	5466	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.4382499346044	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046434	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84605815_84605903_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.13	chr6	-	9091	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-38	1	intron_retention	FALSE	canonical	3	201	junction_12	27.2717344516259	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046533	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.14	chr6	-	5584	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-5601	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	69.5167647299009	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85052096	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85047677_85047947_85052002
ES.28870.15	chr6	-	5389	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	55.1780461782161	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046454	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821117_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.16	chr6	-	5254	21	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.1944067972782	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046394	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980258_84981970_84982019_84988299_84988466_85046277
ES.28870.17	chr6	-	5367	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.6774185734531	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046435	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84689006_84689105_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84974298_84974355_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.18	chr6	-	5545	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.5716712968993	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046487	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84620496_84620611_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.2	chr6	-	8540	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	58	-3159	2	3159	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTGTGTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	85046437	84592309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.20	chr6	-	4859	19	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	85.054231065963	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046451	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828940_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966437_84966512_84980029_84980079_85046277
ES.28870.21	chr6	-	5289	20	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	57.5344290517929	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046481	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980079_84988299_84988466_85046277
ES.28870.22	chr6	-	4873	19	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	74.1633374200754	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046481	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966456_84966512_84980029_84980079_85046277
ES.28870.23	chr6	-	5375	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.4068562669801	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046437	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602102_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980258_84981970_84982019_84988299_84988466_85046277
ES.28870.25	chr6	-	5361	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-5577	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	80.647790519657	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85052072	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84795659_84795705_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85051977
ES.28870.26	chr6	-	5608	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.1520784891828	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046479	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723878_84723957_84724585_84724767_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.27	chr6	-	5371	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.231905630917	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046436	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885263_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.29	chr6	-	5094	20	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	71.3401589747912	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046437	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.3	chr6	-	11374	15	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-14239	3158	intron_retention	FALSE	canonical	3	201	junction_12	25.3598590094581	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCCTTGTGTGGTATT	NA	False	NA	NA	False	NA	NA	NA	84885209	84592310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094
ES.28870.31	chr6	-	5454	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	82.9172643499092	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046434	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84795659_84795705_84812022_84812203_84820990_84821126_84825747_84825891_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.32	chr6	-	4811	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.7631262803723	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046451	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84597679_84598262_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.33	chr6	-	5626	24	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.0478218769316	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046484	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84689006_84689105_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84862003_84862104_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.34	chr6	-	5312	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	81.8763793569222	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046478	84595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84974298_84974355_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.35	chr6	-	4864	19	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	74.1633374200754	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTGTCTTGTGAGA	NA	False	NA	-3	True	ATTAAA	-29	NA	85046437	84595469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966432_84966512_84980029_84980085_85046271
ES.28870.36	chr6	-	5279	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	57.5095426864099	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTGTCTTGTGAGA	NA	False	NA	-3	True	ATTAAA	-29	NA	85046478	84595469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.38	chr6	-	4767	17	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.5481685276718	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTTGTCTTGTGAG	NA	False	NA	-4	True	ATTAAA	-28	NA	85046481	84595470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_85046277
ES.28870.39	chr6	-	5312	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	57.1052536987623	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTTGTCTTGTGAG	NA	False	NA	-4	True	ATTAAA	-28	NA	85046439	84595470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.4	chr6	-	6821	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	13	-1395	2	1395	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTAAAGATTCCCTTG	NA	False	NA	NA	False	ATTAAA	-22	NA	85046482	84594073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.42	chr6	-	5191	19	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	74.6722881481741	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTTGTCTTGTGAG	NA	False	NA	-4	True	ATTAAA	-28	NA	85046437	84595470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828940_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84988299_84988466_85046277
ES.28870.43	chr6	-	5038	20	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	58.9312477957068	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTTGTCTTGTGAG	NA	False	NA	-4	True	ATTAAA	-28	NA	85046411	84595470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.44	chr6	-	5126	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	56.231905630917	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046435	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966456_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.45	chr6	-	5345	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-5609	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	53.953746883058	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85052104	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85051977
ES.28870.46	chr6	-	5191	21	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	81.7559019276284	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046450	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828940_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84981970_84982019_84988299_84988360_85046277
ES.28870.47	chr6	-	5071	18	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	57.7867455259206	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046481	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_85046277
ES.28870.48	chr6	-	5165	20	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	70.8476966589857	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046481	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84981970_84982019_85046277
ES.28870.49	chr6	-	5312	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-5601	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_21	52.8044782681362	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85052096	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85052002
ES.28870.5	chr6	-	5487	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	-46	-2	-46	2	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTGTGAGATTT	NA	False	NA	0	True	ATTAAA	-32	NA	85046541	84595466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.50	chr6	-	5348	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	57.5095426864099	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046481	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.52	chr6	-	5303	22	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	53.953746883058	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTGTCTTGTGA	NA	False	NA	-5	True	ATTAAA	-27	NA	85046468	84595471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988360_85046277
ES.28870.56	chr6	-	4969	21	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	83.5598438246506	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCACTGTGTTGTCTT	NA	False	NA	-9	True	ATTAAA	-23	NA	85046479	84595475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966456_84966512_84980029_84980076_84981970_84982019_84988299_84988360_85046277
ES.28870.57	chr6	-	4409	12	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	13	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	71.6003601265241	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCACTGTGTTGTCTT	NA	False	NA	-9	True	ATTAAA	-23	NA	85046426	84595475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.59	chr6	-	3259	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	-4	2184	-4	-2184	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGTCTCACACTCAA	NA	False	NA	NA	False	CATAAA	-19	NA	85046499	84597652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.60	chr6	-	2871	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	14	2554	3	-2554	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTGCTTAAGTACAT	NA	False	NA	NA	False	AGTAAA	-31	NA	85046481	84598022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.61	chr6	-	2367	20	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-1	-2570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	84.8506917425938	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTTTGCTCTCAAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	85046485	84598038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885172_84966456_84966512_84980029_84980079_84988299_84988360_85046277
ES.28870.62	chr6	-	2686	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	5	-2571	combination_of_known_junctions	FALSE	canonical	3	10	junction_20	52.9942213830904	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCTGTTTGCTCTCAAG	NA	False	NA	NA	False	AGTAAA	-14	NA	85046479	84598039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.63	chr6	-	2598	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	60	2781	4	-2781	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCTGTACAGTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	85046435	84598249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.64	chr6	-	2459	1	Intergenic	novelGene_23997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	84639426	84636967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84637000_84639400
ES.28870.65	chr6	-	2891	1	Intergenic	novelGene_23998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAAGGAAAACC	NA	False	NA	NA	False	NA	NA	NA	84690184	84687293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84687300_84690200
ES.28870.66	chr6	-	2607	21	NNC	ENSMUSG00000033769.17	novel	3803	18	NA	NA	12	-93311	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	72.8957303276399	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCATGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	85046472	84688779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84689105_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832452_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.67	chr6	-	499	1	Intergenic	novelGene_23999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACACGTGTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	84790964	84790465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_84790500_84791000
ES.28870.68	chr6	-	2174	19	NNC	ENSMUSG00000033769.17	novel	3803	18	NA	NA	2	3427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.5174446842488	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTAACTCATATAATA	NA	False	NA	NA	False	AATAAA	-30	NA	85046437	84806877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84807025_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.69	chr6	-	2996	6	ISM	ENSMUSG00000033769.17	ENSMUST00000160783.4	1565	7	47	42154	2	0	5prime_fragment	FALSE	canonical	3	217	junction_1	24.1776756533791	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATATG	NA	False	NA	NA	False	NA	NA	NA	85046437	84964026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.7	chr6	-	5267	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_20	52.9942213830904	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046488	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.70	chr6	-	2844	5	ISM	ENSMUSG00000033769.17	ENSMUST00000162821.8	1383	14	33	135096	-1	0	5prime_fragment	FALSE	canonical	3	10	junction_4	102.315687946668	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATATG	NA	False	NA	NA	False	NA	NA	NA	85046451	84964026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
ES.28870.71	chr6	-	5397	5	ISM	ENSMUSG00000033769.17	ENSMUST00000160783.4	1565	7	-37	53355	-26	6572	5prime_fragment	FALSE	canonical	3	244	junction_3	17.9217047180228	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGTCTTGGTGTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	85046521	84975227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.72	chr6	-	531	3	FSM	ENSMUSG00000033769.17	ENSMUST00000162786.2	565	3	32	2	14	-2	multi-exon	FALSE	canonical	3	244	junction_1	24	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATCATTGAGTA	NA	False	NA	NA	False	AATAAA	-29	NA	85046425	84981801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_84982019_84988299_84988466_85046277
ES.28870.73	chr6	-	2653	1	Intergenic	novelGene_24001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85005750	85003097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85003100_85005800
ES.28870.74	chr6	-	200	1	Intergenic	novelGene_24002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTCATATGTGTATG	NA	False	NA	NA	False	ATTAAA	-6	NA	85044007	85043807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85043800_85044000
ES.28870.8	chr6	-	5491	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.7054494972544	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046448	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84689006_84689105_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28870.9	chr6	-	5502	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	70.235730588068	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTTGTGAGATT	NA	False	NA	-1	True	ATTAAA	-31	NA	85046512	84595467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84795659_84795705_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ES.28871.1	chr6	+	3477	3	Genic_Genomic	ENSMUSG00000081669.2	novel	528	1	NA	NA	-107	42886	multi-exon	FALSE	canonical	0	0	junction_1	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTAGGGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	85053066	85096587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_85053714_85091434_85091675_85093997
ES.28871.2	chr6	+	872	1	FSM	ENSMUSG00000081669.2	ENSMUST00000119728.2	528	1	-7	-337	-7	337	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-26	NA	85053166	85054038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85053200_85054000
ES.28871.3	chr6	+	4170	2	Fusion	ENSMUSG00000081669.2_ENSMUSG00000107925.2	novel	362	2	NA	NA	197	-363	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCTTGGTCATAAGTA	NA	False	NA	NA	False	NA	NA	NA	85053370	85080188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85053714_85076361
ES.28872.1	chr6	-	177	1	Intergenic	novelGene_24003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	6683	False	NA	NA	False	NA	NA	NA	85062803	85062626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85062600_85062800
ES.28873.1	chr6	-	2900	2	NNC	ENSMUSG00000072952.8	novel	4674	3	NA	NA	11735	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTCTTTTGCATCTT	NA	False	NA	NA	False	NA	NA	NA	85091372	85088397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85091009_85091083
ES.28874.1	chr6	-	2082	1	NIC	ENSMUSG00000033735.10	novel	3545	4	NA	NA	5475	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATAATGT	NA	False	NA	NA	False	NA	NA	NA	85109263	85107181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85107200_85109300
ES.28875.1	chr6	-	1239	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	-10	1	-10	-1	multi-exon	FALSE	canonical	3	345	junction_2	5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGTGTGCGTTGTCCTT	7972	False	NA	NA	False	AATACA	-20	NA	85114758	85110660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85111271_85113804_85114096_85114420
ES.28875.3	chr6	-	1132	3	NNC	ENSMUSG00000033735.10	novel	1230	3	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	171	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAATAGAGTGTGCGT	8000	False	NA	NA	False	AATACA	-13	NA	85114730	85110667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85111271_85113804_85113971_85114367
ES.28876.1	chr6	+	1564	3	FSM	ENSMUSG00000033726.9	ENSMUST00000045942.9	1561	3	101	-104	101	0	multi-exon	FALSE	canonical	2	3	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTAGCTATCCATCTT	9521	False	NA	NA	False	AATAAA	-15	NA	85164520	85181444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85165346_85171019_85171205_85180890
ES.28877.1	chr6	+	3975	2	Antisense	novelGene_ENSMUSG00000033720.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	85263903	85273801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_85264021_85269943
ES.28877.2	chr6	+	2991	1	Antisense	novelGene_ENSMUSG00000033720.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAAGGAAGGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	85270584	85273575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_85270600_85273600
ES.28878.1	chr6	-	3708	14	FSM	ENSMUSG00000033720.13	ENSMUST00000045846.12	3656	14	-60	8	-60	-8	multi-exon	TRUE	canonical	0	0	junction_1	2.89664159750196	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACACAGGTGTGGCTT	NA	False	NA	-7	True	AATAAA	-10	NA	85310464	85190038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85192729_85206175_85206294_85211744_85211831_85213821_85213938_85233324_85233416_85244853_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ES.28878.2	chr6	-	423	2	ISM	ENSMUSG00000033720.13	ENSMUST00000059034.13	1081	13	98475	3	29989	-3	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAATGATCTCCCTGG	1977	False	NA	NA	False	AATAAA	-11	NA	85211926	85211364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85211606_85211744
ES.28878.3	chr6	-	3631	9	ISM	ENSMUSG00000033720.13	ENSMUST00000059034.13	1081	13	1	30404	1	3930	5prime_fragment	FALSE	canonical	2	3	junction_3	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGTTTGCTGTCTTTTA	NA	False	NA	NA	False	AATAAA	-35	NA	85310400	85241765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ES.28878.4	chr6	-	5257	5	NIC	ENSMUSG00000033720.13	novel	849	8	NA	NA	1	10662	intron_retention	FALSE	canonical	2	4	junction_1	2.44948974278318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	85310400	85261241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ES.28878.5	chr6	-	3147	6	ISM	ENSMUSG00000033720.13	ENSMUST00000148179.8	849	8	-12	15555	1	10653	5prime_fragment	FALSE	canonical	2	4	junction_2	2.22710574513201	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGGGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	85310400	85261250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ES.28878.6	chr6	-	753	3	ISM	ENSMUSG00000033720.13	ENSMUST00000149362.8	504	4	-39	4163	-36	0	5prime_fragment	FALSE	canonical	2	6	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTTGCATCATGGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	85310440	85276066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85276600_85296503_85296573_85310289
ES.28878.7	chr6	-	3001	2	ISM	ENSMUSG00000033720.13	ENSMUST00000113788.2	514	4	2	17620	-1	2169	5prime_fragment	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGGTATATCAAGGACT	NA	False	NA	NA	False	NA	NA	NA	85310402	85293684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85296573_85310289
ES.28878.8	chr6	-	498	3	NNC	ENSMUSG00000033720.13	novel	638	3	NA	NA	-238	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	85309970	85295855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85295952_85296503_85296573_85309637
ES.28878.9	chr6	-	1254	1	FSM	ENSMUSG00000033720.13	ENSMUST00000203035.2	4476	1	394	2828	-278	-2828	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAATGTCTGGTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	85310010	85308756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85308800_85310000
ES.28879.1	chr6	+	997	1	Intergenic	novelGene_24004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	85331771	85332768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_85331800_85332800
ES.2888.1	chr10	-	4230	20	NNC	ENSMUSG00000020092.10	novel	603	4	NA	NA	193	12884	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.7316911784656	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCGAAAAACTCTATTCA	NA	False	NA	NA	False	AATAAA	-24	NA	61219116	61142550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61144279_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.10	chr10	-	9594	8	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-13683	-2	intron_retention	FALSE	canonical	3	346	junction_5	24.2705835218232	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTGCTGATTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	61191789	61155436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61179979_61182539_61182645_61182816_61186855_61188711_61188815_61191592
ES.2888.12	chr10	-	4594	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	191	-4	intron_retention	FALSE	canonical	0	0	junction_7	91.1513630597717	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219118	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179108_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.14	chr10	-	4312	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.30542617482	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219116	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179108_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.15	chr10	-	4162	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	114.223695578365	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219283	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184379_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.16	chr10	-	4446	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.32385007655	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219282	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179096_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184379_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.17	chr10	-	3886	18	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	149	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.792927942939	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219160	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.18	chr10	-	4072	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	139	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	87.512025291597	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219170	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184379_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.19	chr10	-	4253	22	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	152	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.843157948792	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219157	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61210031_61210207_61219070
ES.2888.2	chr10	-	2940	20	NNC	ENSMUSG00000020092.10	novel	603	4	NA	NA	189	11587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.573551413233	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATATGTACGTATATGC	NA	False	NA	NA	False	NA	NA	NA	61219120	61143847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61144279_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.21	chr10	-	4066	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	156	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.951902506971	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219153	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156824_61156872_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178930_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.22	chr10	-	4202	22	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	191	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.424871023051	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGCTTTGCTGATTGG	NA	False	NA	-5	True	ATTAAA	-18	NA	61219118	61155438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61206140_61206304_61219070
ES.2888.26	chr10	-	4269	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-6	intron_retention	FALSE	canonical	3	26	junction_8	84.426825647355	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219116	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.27	chr10	-	4174	19	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-6	intron_retention	FALSE	canonical	3	320	junction_13	26.7752995625944	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219116	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.28	chr10	-	2294	7	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-174	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.537657154073	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	2121	False	NA	-7	True	ATTAAA	-16	NA	61178280	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176922_61177132_61178097
ES.2888.29	chr10	-	4495	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	131	-6	intron_retention	FALSE	canonical	3	78	junction_13	72.6636084983398	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219178	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.3	chr10	-	180	1	Intergenic	novelGene_2207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTGGTGATA	NA	False	NA	NA	False	NA	NA	NA	61151116	61150936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61150900_61151100
ES.2888.31	chr10	-	4265	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	88.8715029934868	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219302	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178733_61178827_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.32	chr10	-	4104	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	149	-6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	82.3594244288033	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219160	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.33	chr10	-	4411	18	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	165	-6	intron_retention	FALSE	canonical	3	320	junction_12	27.5490126299621	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219144	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.34	chr10	-	4780	18	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	152	-6	intron_retention	FALSE	canonical	3	26	junction_7	86.8677553549948	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219157	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.35	chr10	-	4181	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	185	-6	intron_retention	FALSE	canonical	0	0	junction_1	119.31227213723	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219124	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178210_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.37	chr10	-	4099	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	138	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.8715029934868	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219171	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178690_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.39	chr10	-	4204	22	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	188	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.512742907634	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219121	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61213372_61213537_61219070
ES.2888.40	chr10	-	3888	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	200	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	116.995251565561	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219109	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.41	chr10	-	3984	17	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-8635	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	117.108373286243	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61186741	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184857_61185919_61186085_61186674
ES.2888.43	chr10	-	3939	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.1672602079	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGCTTTGCTGATT	NA	False	NA	-7	True	ATTAAA	-16	NA	61219116	61155440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.45	chr10	-	3757	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-13549	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.647427574552	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61191655	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178210_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592
ES.2888.46	chr10	-	4171	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	171	-7	intron_retention	FALSE	canonical	0	0	junction_1	136.603293641826	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219138	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178210_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.5	chr10	-	4263	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	86.6294407231168	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219338	61155434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.51	chr10	-	4102	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-13947	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.936478482978	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61192053	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61191939
ES.2888.52	chr10	-	4300	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	136	-7	intron_retention	FALSE	canonical	0	0	junction_1	88.7316911784656	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219173	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.53	chr10	-	3989	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	215	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.041108527183	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219094	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.54	chr10	-	4182	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	136	-7	intron_retention	FALSE	canonical	0	0	junction_1	88.8715029934868	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219173	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.55	chr10	-	3792	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-13675	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	144.041274948845	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61191781	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61158999_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61186674_61186855_61188711_61188815_61191592
ES.2888.56	chr10	-	4118	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	177	-7	intron_retention	FALSE	canonical	0	0	junction_1	114.902463756376	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219132	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.57	chr10	-	2999	13	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.492689870978	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219116	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.58	chr10	-	4332	19	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	152	-7	intron_retention	FALSE	canonical	3	320	junction_13	27.398296784046	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219157	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.59	chr10	-	4586	18	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	190	-7	intron_retention	FALSE	canonical	3	320	junction_12	28.191510170169	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219119	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.6	chr10	-	4515	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	-233	0	-233	0	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219542	61155434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.60	chr10	-	4159	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-13956	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	88.8744328811419	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61192062	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61191939
ES.2888.62	chr10	-	3645	17	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	95.594010501443	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219276	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184140_61188779_61188815_61191592_61191816_61219070
ES.2888.64	chr10	-	4277	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	183	-7	intron_retention	FALSE	canonical	0	0	junction_1	122.181015781029	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219126	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184379_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.65	chr10	-	4028	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	183	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	86.6294407231168	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219126	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178157_61178220_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.66	chr10	-	3145	14	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-6273	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	126.482872989837	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61184379	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312
ES.2888.69	chr10	-	3928	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	158	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.75169894264	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219151	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.7	chr10	-	3846	17	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-9090	-1	intron_retention	FALSE	canonical	0	0	junction_16	117.108373286243	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTGCTGATTGGTCT	NA	False	NA	-2	True	ATTAAA	-21	NA	61187196	61155435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61187160
ES.2888.70	chr10	-	4980	18	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	155	-7	intron_retention	FALSE	canonical	0	0	junction_1	92.9230808891834	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219154	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.71	chr10	-	3988	19	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	191	-7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	89.6297769359059	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219118	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.72	chr10	-	3998	21	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	162	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.267536311732	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219147	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184379_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.73	chr10	-	4012	19	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	43	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	110.709064279219	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61219266	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61219070
ES.2888.74	chr10	-	4260	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-34504	-7	intron_retention	FALSE	canonical	0	0	junction_1	119.93763383976	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATACTGCTTTGCTGAT	NA	False	NA	-8	True	ATTAAA	-15	NA	61253813	61155441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61253632
ES.2888.77	chr10	-	4519	18	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	193	-8	intron_retention	FALSE	canonical	3	320	junction_12	26.0882187147636	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATACTGCTTTGCTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	61219116	61155442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178937_61179406_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.78	chr10	-	4196	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	-236	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	88.8744328811419	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTAACATACTGCTT	NA	False	NA	-15	True	ATTAAA	-8	NA	61219545	61155448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219378
ES.2888.79	chr10	-	176	1	Intergenic	novelGene_2211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	61189336	61189160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61189200_61189300
ES.2888.8	chr10	-	4376	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	43	-1	intron_retention	FALSE	canonical	0	0	junction_1	114.539980802408	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTGCTGATTGGTCT	NA	False	NA	-2	True	ATTAAA	-21	NA	61219266	61155435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61156821_61156868_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179513_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.2888.80	chr10	-	809	2	Antisense	novelGene_ENSMUSG00000037171.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	61253811	61223565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61224196_61253632
ES.2888.81	chr10	-	170	1	Intergenic	novelGene_2213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAATCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61223924	61223754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61223800_61223900
ES.2888.82	chr10	-	177	1	Intergenic	novelGene_2215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	61239670	61239493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61239500_61239700
ES.2888.9	chr10	-	4682	18	NIC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	154	-2	intron_retention	FALSE	canonical	3	320	junction_12	26.6375128986474	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTGCTGATTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	61219155	61155436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ES.28880.10	chr6	-	5607	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	48.2311102920097	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85351621	85311948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325013_85325628_85325974_85351079
ES.28880.11	chr6	-	3392	4	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	57.9214026840588	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85318633	85311948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85313262_85313628_85314209_85314462_85314653_85317324
ES.28880.12	chr6	-	7770	2	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	31573	6	-1354	-1	3prime_fragment	FALSE	canonical	3	103	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCAGCTTGTGTGTTTGT	NA	False	NA	-3	True	AATAAA	-15	NA	85319973	85311949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85314209_85314462
ES.28880.13	chr6	-	5555	7	NIC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	47.1678445082617	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCAGCTTGTGTGTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	85351608	85311950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85314209_85314462_85314653_85317324_85317480_85318033_85319344_85324761_85325438_85325536_85325974_85351079
ES.28880.14	chr6	-	5570	7	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.1678445082617	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCAGCTTGTGTGTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	85351630	85311950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85317473_85318033_85319344_85324761_85325438_85325536_85325974_85351079
ES.28880.15	chr6	-	3217	5	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	8	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	52.8464757576132	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCAGCTTGTGTGTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	85351608	85311950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85313378_85319195_85319344_85324761_85325438_85325536_85325974_85351079
ES.28880.16	chr6	-	5023	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	-61	1157	-61	-1157	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTCTCTGGCCATGGT	NA	False	NA	1	True	ATTAAA	-40	NA	85351677	85313105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
ES.28880.17	chr6	-	2981	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	-125	1179	-55	-1174	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTCTGGATGTAGAT	NA	False	NA	-16	True	ATTAAA	-23	NA	85351671	85313122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
ES.28880.18	chr6	-	4011	5	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	11	-1176	intron_retention	FALSE	non_canonical	0	0	junction_3	53.7092869064559	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAGCCTCTGGATGTAG	NA	False	NA	-18	True	ATTAAA	-21	NA	85351605	85313124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319183_85325620_85325974_85351079
ES.28880.19	chr6	-	4387	7	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	8	-1177	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	47.1678445082617	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGAGCCTCTGGATGTA	NA	False	NA	-19	True	ATTAAA	-20	NA	85351608	85313125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85317580_85318126_85319344_85324761_85325438_85325536_85325974_85351079
ES.28880.2	chr6	-	4208	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	-172	-1	-102	1	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTTTGTTTTGAAA	NA	False	NA	4	True	AATAAA	-22	NA	85351718	85311942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
ES.28880.20	chr6	-	4696	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-54	-1177	intron_retention	FALSE	canonical	3	18	junction_3	44.0817422523203	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGAGCCTCTGGATGTA	NA	False	NA	-19	True	ATTAAA	-20	NA	85351670	85313125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319044_85324761_85325438_85325536_85325974_85351079
ES.28880.3	chr6	-	5856	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-32	0	intron_retention	FALSE	canonical	3	18	junction_3	44.0817422523203	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTTTGTTTTGAA	NA	False	NA	3	True	AATAAA	-21	NA	85351648	85311943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319044_85324761_85325438_85325536_85325974_85351079
ES.28880.5	chr6	-	3206	1	FSM	ENSMUSG00000076012.3	ENSMUST00000102058.3	82	1	-1795	-1329	-1795	1329	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTGTGTTTGTTTTGA	NA	False	NA	2	True	AATAAA	-20	NA	85315150	85311944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85311900_85315200
ES.28880.6	chr6	-	6120	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_3	51.0591813487055	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85351621	85311947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319328_85324750_85325438_85325536_85325974_85351079
ES.28880.7	chr6	-	3592	5	NNC	ENSMUSG00000051343.12	novel	4035	5	NA	NA	-8649	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.4747647998594	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	6215	False	NA	-1	True	AATAAA	-17	NA	85327268	85311947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85327240
ES.28880.8	chr6	-	6108	7	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-2779	1	intron_retention	FALSE	canonical	1	1	junction_6	46.8282915435625	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85354395	85311947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079_85351519_85354309
ES.28880.9	chr6	-	11588	5	NIC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	-50	1	intron_retention	FALSE	canonical	3	103	junction_1	13.0838641081295	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTTGTGTGTTTGTTT	NA	False	NA	-1	True	AATAAA	-17	NA	85351666	85311947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85314209_85314462_85314653_85317324_85325438_85325536_85325974_85351079
ES.28881.1	chr6	-	294	2	Intergenic	novelGene_24005	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGCCTTGGTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	85356060	85355320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85355430_85355875
ES.28882.1	chr6	-	1695	1	Intergenic	novelGene_24006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTATCTCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85358525	85356830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85356800_85358500
ES.28883.1	chr6	+	1926	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-27	587	-27	405	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCAGAATTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	85408943	85422830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.10	chr6	+	2863	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	411	junction_7	63.122339564263	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTTTGCAACAATGCC	NA	False	NA	20	True	AATAAA	-14	NA	85408966	85423409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.11	chr6	+	3296	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	411	junction_6	61.4932637579378	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85408968	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.12	chr6	+	3274	10	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-1	-11	intron_retention	FALSE	canonical	3	423	junction_8	63.4807251780869	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGGCCTTTGCAACAAT	NA	False	NA	17	True	AATAAA	-11	NA	85408969	85423406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.13	chr6	+	2472	13	NNC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.377778961735	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85408969	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85409075_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.16	chr6	+	2780	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	1	-7	intron_retention	FALSE	canonical	3	411	junction_7	62.0754006986731	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85408971	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.18	chr6	+	2293	11	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	159.289798794524	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85408978	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.19	chr6	+	4893	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	10	-2417	-3	2417	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGAATCCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	85408980	85425834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.2	chr6	+	2513	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-24	-3	-24	3	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCTTGTGGGGCGT	NA	False	NA	31	True	AATAAA	-25	NA	85408946	85423420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.20	chr6	+	4114	9	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-25	-9	intron_retention	FALSE	canonical	3	423	junction_7	58.9330923590473	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCTTTGCAACAATGC	NA	False	NA	19	True	AATAAA	-13	NA	85409029	85423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.21	chr6	+	4386	10	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-20	-5	intron_retention	FALSE	canonical	3	411	junction_7	65.7009686682823	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGCAACAATGCCTTG	NA	False	NA	23	True	AATAAA	-17	NA	85409034	85423412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85421320_85421899
ES.28883.22	chr6	+	4024	9	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	423	junction_7	63.5196819891284	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTGCAACAATGCCTT	NA	False	NA	22	True	AATAAA	-16	NA	85409039	85423411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.23	chr6	+	4290	11	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-8	-9	intron_retention	FALSE	canonical	3	411	junction_7	62.3907845759292	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCTTTGCAACAATGC	NA	False	NA	19	True	AATAAA	-13	NA	85409046	85423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85421320_85421899_85421971_85422050
ES.28883.24	chr6	+	2399	13	NNC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	146.639012544411	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAACAATGCCTTGTG	NA	False	NA	25	True	AATAAA	-19	NA	85409048	85423414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417627_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.25	chr6	+	2505	13	NNC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.377778961735	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85409075	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85409214_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.26	chr6	+	6029	6	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-1036	-9	intron_retention	FALSE	canonical	3	423	junction_4	62.7056616263635	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCTTTGCAACAATGC	NA	False	NA	19	True	AATAAA	-13	NA	85415089	85423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85415199_85415731_85415872_85416638_85416758_85417087_85421320_85421899_85421971_85422050
ES.28883.27	chr6	+	1999	9	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	8115	9	960	-9	3prime_fragment	FALSE	canonical	3	411	junction_3	32.0309908526102	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCTTTGCAACAATGC	NA	False	NA	19	True	AATAAA	-13	NA	85417085	85423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.3	chr6	+	3619	11	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-23	-7	intron_retention	FALSE	canonical	3	411	junction_6	62.6788640611809	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTTTGCAACAATGCCT	NA	False	NA	21	True	AATAAA	-15	NA	85408947	85423410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85418605_85418719_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.6	chr6	+	3170	11	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	411	junction_7	64.8910625587222	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTTTGCAACAATGCC	NA	False	NA	20	True	AATAAA	-14	NA	85408961	85423409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.7	chr6	+	4487	10	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-7	-10	intron_retention	FALSE	canonical	3	423	junction_8	59.5055760433164	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGGCCTTTGCAACAATG	NA	False	NA	18	True	AATAAA	-12	NA	85408963	85423407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85419200_85419580_85421320_85421899_85421971_85422050
ES.28883.8	chr6	+	3727	10	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	-6	3	intron_retention	FALSE	canonical	3	423	junction_8	59.890228803811	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCTTGTGGGGCGT	NA	False	NA	31	True	AATAAA	-25	NA	85408964	85423420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ES.28883.9	chr6	+	2563	12	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	-6	9	-6	-9	intron_retention	FALSE	canonical	3	411	junction_7	63.1809679471896	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCTTTGCAACAATGC	NA	False	NA	19	True	AATAAA	-13	NA	85408964	85423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899
ES.28884.1	chr6	+	2503	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	-57	-5	-57	5	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCTGTGATGGCCCTT	4553	False	NA	21	True	AGTAAA	-23	NA	85428438	85445462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.10	chr6	+	1714	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	0	-89	combination_of_known_splicesites	FALSE	canonical	2	128	junction_9	1832.09505484841	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGTGTTTTTCATAA	5115	False	NA	17	True	AATAAA	-15	NA	85429000	85445368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444560_85444768_85445034
ES.28884.11	chr6	+	1676	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	2	-93	combination_of_known_junctions	FALSE	canonical	2	361	junction_6	1749.26064381498	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5117	False	NA	13	True	AATAAA	-11	NA	85429002	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.12	chr6	+	1834	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	2	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1791.9852050747	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5117	False	NA	13	True	AATAAA	-11	NA	85429002	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439014_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.14	chr6	+	1611	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-10	-95	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	1853.37399355877	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGCTTGGTGTGTTTT	5138	False	NA	11	True	AATAAA	-9	NA	85429023	85445362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85445034
ES.28884.15	chr6	+	2510	10	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	528	89	-10	-89	intron_retention	FALSE	canonical	3	5555	junction_1	294.003065407719	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGTGTTTTTCATAA	5138	False	NA	17	True	AATAAA	-15	NA	85429023	85445368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008
ES.28884.22	chr6	+	2229	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-1	-94	intron_retention	FALSE	canonical	3	5555	junction_1	308.502917328183	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCTTGGTGTGTTTTT	5147	False	NA	12	True	AATAAA	-10	NA	85429032	85445363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444768_85445034
ES.28884.25	chr6	+	1940	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	5	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1788.1176168167	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5153	False	NA	13	True	AATAAA	-11	NA	85429038	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436788_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.26	chr6	+	1770	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	6	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1795.07751622491	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTGTGTTTTTCATA	5154	False	NA	16	True	AATAAA	-14	NA	85429039	85445367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429073_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.27	chr6	+	1695	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	8	-93	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1848.47877997017	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5156	False	NA	13	True	AATAAA	-11	NA	85429041	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436096_85436251_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.28	chr6	+	1794	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	551	96	13	-96	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTGCTTGGTGTGTTT	5161	False	NA	10	True	AATAAA	-8	NA	85429046	85445361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.31	chr6	+	2066	11	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	553	89	15	-89	intron_retention	FALSE	canonical	3	5555	junction_1	284.653895107726	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGTGTTTTTCATAA	5163	False	NA	17	True	AATAAA	-15	NA	85429048	85445368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560
ES.28884.32	chr6	+	1786	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	16	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1771.26644238448	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTGTGTTTTTCATA	5164	False	NA	16	True	AATAAA	-14	NA	85429049	85445367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444757_85445034
ES.28884.35	chr6	+	1801	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-13	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1791.9852050747	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGCTTGGTGTGTTTT	5175	False	NA	11	True	AATAAA	-9	NA	85429060	85445362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438563_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.36	chr6	+	1764	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-12	-93	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	1791.30998743221	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5176	False	NA	13	True	AATAAA	-11	NA	85429061	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444124_85444560_85444768_85445034
ES.28884.37	chr6	+	1865	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1771.26644238448	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	5177	False	NA	16	True	AGTAAA	-18	NA	85429062	85445457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445043
ES.28884.38	chr6	+	1627	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-11	-93	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	1873.59987457301	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5177	False	NA	13	True	AATAAA	-11	NA	85429062	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.40	chr6	+	2048	13	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-11	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2317.54278996814	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGGTGTGTTTTTCA	5177	False	NA	14	True	AATAAA	-12	NA	85429062	85445365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85435376_85435643_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.41	chr6	+	1518	10	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-10	-94	combination_of_known_splicesites	FALSE	canonical	1	57	junction_1	1930.50141890522	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCTTGGTGTGTTTTT	5178	False	NA	12	True	AATAAA	-10	NA	85429063	85445363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85429110_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.43	chr6	+	1772	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-9	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1788.1176168167	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	5179	False	NA	13	True	AATAAA	-11	NA	85429064	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438496_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.44	chr6	+	5854	10	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	3323	-92	intron_retention	FALSE	canonical	3	5813	junction_5	248.639309387795	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGGTGTGTTTTTCA	368	False	NA	14	True	AATAAA	-12	NA	85432396	85445365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444768_85445034
ES.28884.45	chr6	+	1124	6	ISM	ENSMUSG00000030007.9	ENSMUST00000204592.3	1544	11	12686	-100	2626	-93	3prime_fragment	FALSE	canonical	3	5918	junction_4	241.318544666588	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGGTGTGTTTTTC	49	False	NA	13	True	AATAAA	-11	NA	85441759	85445364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28884.6	chr6	+	1870	12	NNC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	-27	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1772.2428429013	2086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTTTTTCATAAAC	5088	False	NA	19	True	AATAAA	-17	NA	85428973	85445370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438032_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ES.28885.1	chr6	-	1043	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	38	-128	13	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428914	85423791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
ES.28885.10	chr6	-	1252	4	FSM	ENSMUSG00000030008.10	ENSMUST00000146086.8	955	4	-76	-221	6	-3	multi-exon	FALSE	canonical	3	116	junction_3	20.8219969156552	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGGTTTGTGCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	85428259	85423794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85424671_85424917_85425028_85425472_85425574_85428094
ES.28885.11	chr6	-	922	4	NIC	ENSMUSG00000030008.10	novel	1038	5	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	63.8957484240279	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGGTTTGTGCCTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	85428253	85423794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85424280_85424502_85424671_85424917_85425028_85428094
ES.28885.2	chr6	-	4507	3	ISM	ENSMUSG00000030008.10	ENSMUST00000139875.8	1000	4	55	-397	55	-1	intron_retention	FALSE	canonical	3	19	junction_1	74	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428872	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85424790_85424917_85425028_85425472
ES.28885.3	chr6	-	1476	4	NIC	ENSMUSG00000030008.10	novel	1038	5	NA	NA	6	-1	intron_retention	FALSE	canonical	3	116	junction_3	16.1314048434171	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428259	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85424280_85424502_85424671_85424917_85425574_85428094
ES.28885.4	chr6	-	1309	4	NIC	ENSMUSG00000030008.10	novel	1038	5	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	116	junction_3	21.7715410570772	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428290	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85424280_85424502_85425028_85425472_85425574_85428094
ES.28885.5	chr6	-	1227	4	NNC	ENSMUSG00000030008.10	novel	953	5	NA	NA	78	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	76.054074330191	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428849	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85424280_85424502_85425028_85425472_85425577_85428738
ES.28885.6	chr6	-	1114	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	-77	1	-77	-1	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428342	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
ES.28885.7	chr6	-	1338	4	FSM	ENSMUSG00000030008.10	ENSMUST00000139875.8	1000	4	59	-397	59	-1	multi-exon	FALSE	canonical	3	19	junction_1	61.5593661074865	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428868	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85424790_85424917_85425028_85425472_85425574_85428738
ES.28885.8	chr6	-	841	4	FSM	ENSMUSG00000030008.10	ENSMUST00000113770.2	610	4	-7	-224	1	-1	multi-exon	FALSE	canonical	3	16	junction_1	62.7180640290782	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428237	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85424280_85424917_85425028_85425472_85425574_85428094
ES.28885.9	chr6	-	1201	4	NIC	ENSMUSG00000030008.10	novel	953	5	NA	NA	77	-1	intron_retention	FALSE	canonical	3	68	junction_3	41.907305117631	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGTTTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	85428850	85423792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85424671_85424917_85425028_85425472_85425574_85428738
ES.28886.1	chr6	-	169	1	Intergenic	novelGene_24007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATGTTT	NA	False	NA	NA	False	NA	NA	NA	85440041	85439872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85439900_85440000
ES.28887.1	chr6	-	4082	5	ISM	ENSMUSG00000047013.16	ENSMUST00000161546.2	6357	13	25118	-6	25118	0	3prime_fragment	FALSE	canonical	1	1	junction_4	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTGTGTGGCCAAAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	85454722	85446555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85450071_85450182_85450299_85452061_85452221_85452375_85452495_85454549
ES.28888.1	chr6	-	2138	2	FSM	ENSMUSG00000071341.5	ENSMUST00000095759.5	2148	2	1	9	1	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTTACCGAATCTGCC	NA	False	NA	NA	False	ATTAAA	-12	NA	85490570	85488111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85489926_85490246
ES.28889.1	chr6	+	177	1	Intergenic	novelGene_24008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTACTTTGTG	NA	False	NA	NA	False	NA	NA	NA	85503758	85503935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_85503800_85503900
ES.2889.1	chr10	-	174	1	Intergenic	novelGene_2217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAGAAGACAAAAGACA	9853	False	NA	NA	False	NA	NA	NA	61263578	61263404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61263400_61263600
ES.28890.1	chr6	+	9819	22	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	9986	23	NA	NA	-39	2	multi-exon	FALSE	canonical	0	0	junction_14	15.5226409142382	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTAGTCCCTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	85564588	85781041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85586108_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.10	chr6	+	10792	22	NNC	ENSMUSG00000063810.8	novel	11163	23	NA	NA	12296	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.7053365571032	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85576923	85679733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587805_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28890.11	chr6	+	9030	20	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	11163	23	NA	NA	22667	2	multi-exon	FALSE	canonical	2	2	junction_4	14.8521802311219	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTAGTCCCTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	85587294	85781041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85587515_85587799_85587919_85592229_85592390_85596415_85599907_85600005_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.12	chr6	+	6247	16	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	2290	9	NA	NA	-18901	0	multi-exon	FALSE	canonical	1	1	junction_9	17.6672955862898	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	9540	False	NA	NA	False	AATAAA	-15	NA	85597543	85781039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85599907_85600005_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.13	chr6	+	4353	8	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	33959	34593	-17858	-1678	internal_fragment	FALSE	canonical	3	22	junction_1	11.0435131943358	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATGAATATCATTTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	85598586	85645027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848
ES.28890.14	chr6	+	6054	17	NNC	ENSMUSG00000063810.8	novel	9986	23	NA	NA	-17552	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	14.7805562733613	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCTTAGTCCCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	85598892	85679734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85599907_85600005_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28890.15	chr6	+	4136	3	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	34800	71474	-17017	-11027	internal_fragment	FALSE	canonical	3	22	junction_1	0.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTTTAGAGAACTGGC	NA	False	NA	NA	False	AAGAAA	-2	NA	85599427	85608146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85600184_85601565_85601700_85604900
ES.28890.16	chr6	+	7469	9	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	35180	20657	-16637	12258	internal_fragment	FALSE	canonical	3	22	junction_1	10.4403065089106	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCCCATTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	85599807	85658963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537
ES.28890.17	chr6	+	3396	16	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	2290	9	NA	NA	-16397	0	multi-exon	FALSE	canonical	0	0	junction_3	15.9727545805002	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85600047	85781039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85600184_85601565_85601700_85604900_85605097_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.18	chr6	+	4662	7	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	40386	22841	-11431	10074	internal_fragment	FALSE	canonical	3	36	junction_4	4.92442890089805	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTCTCAAAAATATT	NA	False	NA	NA	False	AATAAA	-14	NA	85605013	85656779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537
ES.28890.19	chr6	+	4210	6	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	52444	22839	627	10076	internal_fragment	FALSE	canonical	3	36	junction_3	5.34415568635495	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTCTCAAAAATATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	85617071	85656781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537
ES.28890.2	chr6	+	11225	22	NIC	ENSMUSG00000063810.8	novel	11163	23	NA	NA	-38	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	15.2979479305021	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCTTAGTCCCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	85564589	85679734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28890.20	chr6	+	3820	3	NIC	ENSMUSG00000063810.8	novel	9986	23	NA	NA	3246	10074	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	15.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTCTCAAAAATATT	NA	False	NA	NA	False	AATAAA	-14	NA	85626957	85656779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85628401_85633376_85633512_85654537
ES.28890.21	chr6	+	2336	9	NIC	ENSMUSG00000063810.8	novel	9986	23	NA	NA	9662	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	17.2970373185699	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTAGTCCCTGTGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	85633373	85679737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85633512_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28890.22	chr6	+	5227	1	FSM	ENSMUSG00000107278.2	ENSMUST00000202081.2	3588	1	979	-2618	979	2618	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	85657237	85662464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85657200_85662500
ES.28890.23	chr6	+	1460	2	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	112824	-113	33787	-2	3prime_fragment	FALSE	canonical	3	27	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGCTTAGTCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85677451	85679733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85678754_85679575
ES.28890.3	chr6	+	13276	16	ISM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	-38	20927	-38	11988	5prime_fragment	FALSE	canonical	3	14	junction_3	12.272824541328	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAAGATTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	85564589	85658693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537
ES.28890.4	chr6	+	11312	23	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	11163	23	NA	NA	-33	4	multi-exon	FALSE	canonical	3	3	junction_18	13.3957560813765	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTAGTCCCTGTGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	85564594	85781043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.5	chr6	+	10427	16	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	11163	23	NA	NA	-33	-23746	multi-exon	FALSE	canonical	3	14	junction_3	12.1117023301158	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATATCGTTTGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	85564594	85757293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85751381_85751472_85755981
ES.28890.6	chr6	+	11154	22	Fusion	ENSMUSG00000090098.8_ENSMUSG00000063810.8	novel	11163	23	NA	NA	-33	2	multi-exon	FALSE	canonical	1	1	junction_12	14.643612059518	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTAGTCCCTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	85564594	85781041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85633376_85633512_85751381_85751472_85755981_85757136_85773111_85773230_85774373_85774578_85774856_85775099_85775593_85775748_85776440_85776505_85779959_85780060_85780882
ES.28890.7	chr6	+	9049	14	NIC	ENSMUSG00000063810.8	novel	11163	23	NA	NA	-33	-1677	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	13.6247251750145	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAATATCATTTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	85564594	85645028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85633376_85633512_85644848
ES.28890.8	chr6	+	11310	23	FSM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	-30	-117	-30	2	multi-exon	FALSE	canonical	3	14	junction_3	14.0492051479525	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTAGTCCCTGTGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	85564597	85679737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28890.9	chr6	+	9806	23	NNC	ENSMUSG00000063810.8	novel	9986	23	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	16.5534446241747	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTAGTCCCTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	85564693	85679735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85586108_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537_85655692_85671815_85671934_85673074_85673280_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ES.28891.1	chr6	-	163	1	Intergenic	novelGene_24009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	85603241	85603078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85603100_85603200
ES.28892.1	chr6	-	131	1	Intergenic	novelGene_24010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	85642192	85642061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85642100_85642200
ES.28893.1	chr6	-	176	1	Intergenic	novelGene_24011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTGCATCCTGC	7149	False	NA	NA	False	NA	NA	NA	85755339	85755163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85755200_85755300
ES.28894.1	chr6	-	2001	1	Intergenic	novelGene_24012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTATAGGTTGCAAGAATA	3168	False	NA	NA	False	NA	NA	NA	85762584	85760583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85760600_85762600
ES.28895.1	chr6	-	1472	4	NNC	ENSMUSG00000079494.3	novel	986	3	NA	NA	-16012	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGATTACTACTTGACA	7038	False	NA	NA	False	AATAAA	-25	NA	85813966	85794200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85795033_85797606_85797694_85797888_85798014_85813538
ES.28896.1	chr6	+	1544	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	-118	-946	-118	946	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGAGGGGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	85820843	85822387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85820800_85822400
ES.28897.1	chr6	-	935	3	Intergenic	novelGene_24013	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCCTGGGTCTGATAG	5883	False	NA	NA	False	NA	NA	NA	85826392	85822895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85823722_85825926_85825997_85826353
ES.28898.1	chr6	-	1879	6	NNC	ENSMUSG00000033634.8	novel	3301	3	NA	NA	-26324	-1949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.8	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGACTGTGTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	85872464	85844352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85845435_85845760_85845906_85846015_85846137_85859768_85859856_85860336_85860510_85872193
ES.28898.2	chr6	-	6975	5	NNC	ENSMUSG00000033634.8	novel	3301	3	NA	NA	-13656	-2740	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.82915619758885	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCTTATTTTCTGG	9339	False	NA	NA	False	NA	NA	NA	85859796	85845143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85845435_85845760_85845906_85846015_85846244_85847033_85847921_85854372
ES.28898.3	chr6	-	3736	5	NNC	ENSMUSG00000033634.8	novel	3301	3	NA	NA	-10488	-2747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.82915619758885	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGCCTGTGGCTTAT	9260	False	NA	NA	False	NA	NA	NA	85856628	85845150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85845435_85845760_85845906_85846079_85846244_85847033_85847921_85854372
ES.28898.4	chr6	-	438	1	Intergenic	novelGene_24014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCTAGAGACTATCCAT	NA	False	NA	NA	False	NA	NA	NA	85854368	85853930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85853900_85854400
ES.28899.1	chr6	+	2505	10	NNC	ENSMUSG00000054226.14	novel	814	6	NA	NA	-7098	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.59473696779	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTTATTATGT	NA	False	NA	23	True	NA	NA	NA	85881748	85907265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85881845_85887686_85887790_85888858_85888963_85890377_85890463_85891453_85891511_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.10	chr6	+	3333	4	FSM	ENSMUSG00000054226.14	ENSMUST00000113751.8	692	4	30	-2671	2	-3	multi-exon	FALSE	canonical	3	153	junction_1	26.1916017074176	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTTATT	3420	False	NA	19	True	NA	NA	NA	85892730	85907261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222
ES.28899.11	chr6	+	2537	5	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	153	junction_1	22.8842194535885	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3426	False	NA	20	True	NA	NA	NA	85892736	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904967_85905757
ES.28899.12	chr6	+	2084	6	NNC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.0323010041355	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3428	False	NA	20	True	NA	NA	NA	85892738	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904796_85904967_85905757
ES.28899.13	chr6	+	831	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	10	1262	0	-5	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3428	False	NA	NA	False	NA	NA	NA	85892738	85906002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.14	chr6	+	2401	6	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.5636048052786	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTTATTAT	3436	False	NA	21	True	NA	NA	NA	85892746	85907263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.15	chr6	+	3181	5	FSM	ENSMUSG00000054226.14	ENSMUST00000149026.5	818	5	-23	-2340	18	-2	multi-exon	FALSE	canonical	0	0	junction_1	86.3901035998916	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3446	False	NA	20	True	NA	NA	NA	85892756	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ES.28899.16	chr6	+	2373	6	NNC	ENSMUSG00000054226.14	novel	818	5	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.5636048052786	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTTATTATGT	3482	False	NA	23	True	NA	NA	NA	85892792	85907265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85893106_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.17	chr6	+	2268	7	NIC	ENSMUSG00000054226.14	novel	818	5	NA	NA	183	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	93.392392028949	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3652	False	NA	20	True	NA	NA	NA	85892962	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85893090_85898404_85898494_85900114_85900199_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.18	chr6	+	2508	6	NNC	ENSMUSG00000054226.14	novel	818	5	NA	NA	239	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.5636048052786	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTTATTATGT	3708	False	NA	23	True	NA	NA	NA	85893018	85907265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85893467_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.19	chr6	+	1969	4	ISM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	8612	2	8561	-2	3prime_fragment	FALSE	canonical	3	173	junction_2	14.2672897060218	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	NA	False	NA	20	True	NA	NA	NA	85901340	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.2	chr6	+	2168	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	-66	1	-38	-1	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTTATTAT	3352	False	NA	21	True	NA	NA	NA	85892662	85907263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ES.28899.20	chr6	+	507	3	ISM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	8686	3	8626	-3	3prime_fragment	FALSE	canonical	3	173	junction_2	17	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGGGACTCATTACA	NA	False	NA	NA	False	TATAAA	-32	NA	85901405	85905074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85901505_85904222_85904346_85904789
ES.28899.21	chr6	+	4095	1	NIC	ENSMUSG00000054226.14	novel	2222	7	NA	NA	9128	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85901907	85906002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85901900_85906000
ES.28899.22	chr6	+	627	1	NIC	ENSMUSG00000054226.14	novel	814	6	NA	NA	12103	7	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGACTCTTAAAATTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	85904882	85905509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85904900_85905500
ES.28899.3	chr6	+	2925	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	-23	-2186	-4	-1	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTTATTAT	3386	False	NA	21	True	NA	NA	NA	85892696	85907263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ES.28899.4	chr6	+	783	6	NNC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	75.7643715739793	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3393	False	NA	20	True	NA	NA	NA	85892703	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85907100
ES.28899.5	chr6	+	5288	4	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	3	-2	intron_retention	FALSE	canonical	3	153	junction_1	23.2808934536456	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3393	False	NA	20	True	NA	NA	NA	85892703	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85892773_85898404_85898494_85901341_85904967_85905757
ES.28899.6	chr6	+	2071	6	NIC	ENSMUSG00000054226.14	novel	2222	7	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	81.8916357145222	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTTATTA	3409	False	NA	20	True	NA	NA	NA	85892719	85907262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85892773_85898404_85898494_85900114_85900199_85901341_85901505_85904789_85904967_85905757
ES.28899.8	chr6	+	2999	6	ISM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	8	6	-1	-4	intron_retention	FALSE	canonical	3	4	junction_1	92.4445779913565	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTTAT	3417	False	NA	18	True	NA	NA	NA	85892727	85907260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_85892773_85896898_85897007_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ES.28899.9	chr6	+	1475	5	NIC	ENSMUSG00000054226.14	novel	2103	6	NA	NA	-1	184	intron_retention	FALSE	canonical	3	153	junction_1	22.8842194535885	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTGCTTTTTAGGTAGA	3417	False	NA	NA	False	NA	NA	NA	85892727	85906191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904967_85905757
ES.289.1	chr1	+	250	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATTAAAAAAAAATGC	4900	False	NA	73	True	NA	NA	NA	36707308	36707558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36707300_36707600
ES.2890.1	chr10	-	3836	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	20565	233	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGACTCTTGGTGTATTG	5559	False	NA	NA	False	NA	NA	NA	61267872	61264036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_61264000_61267900
ES.2890.10	chr10	-	1942	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-133	3975	-133	354	multi-exon	FALSE	canonical	3	200	junction_2	2.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCACTGCTGTCACTGT	NA	False	NA	NA	False	AAAAAG	-24	NA	61288573	61268244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61269608_61270696_61270883_61288180
ES.2890.11	chr10	-	1546	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-132	4370	-132	-41	multi-exon	FALSE	canonical	3	200	junction_2	2.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTCCCCTGCTTTGG	NA	False	NA	NA	False	TTTAAA	-15	NA	61288572	61268639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61269608_61270696_61270883_61288180
ES.2890.12	chr10	-	1706	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	-142	-18278	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGCAAACATCTAGGAG	NA	False	NA	NA	False	NA	NA	NA	61288582	61286876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_61286900_61288600
ES.2890.13	chr10	-	1587	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	-155	-18410	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61288595	61287008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_61287000_61288600
ES.2890.14	chr10	-	1394	2	NNC	ENSMUSG00000020091.16	novel	5784	3	NA	NA	-143	-18412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61288583	61287010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61288371_61288549
ES.2890.15	chr10	-	1018	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	-132	-18956	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTTGTTTGTCTCTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	61288572	61287554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_61287600_61288600
ES.2890.2	chr10	-	5933	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-149	0	-149	0	multi-exon	FALSE	canonical	3	200	junction_2	2.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGTGGTTTGTGGTA	NA	False	NA	-1	True	AATAAA	-16	NA	61288589	61264269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61269608_61270696_61270883_61288180
ES.2890.3	chr10	-	5747	4	NNC	ENSMUSG00000020091.16	novel	5784	3	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.48123724935	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGTGGTTTGTGGTA	NA	False	NA	-1	True	AATAAA	-16	NA	61288539	61264269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61269608_61270696_61270883_61288180_61288366_61288501
ES.2890.4	chr10	-	5870	4	NNC	ENSMUSG00000020091.16	novel	1422	4	NA	NA	-142	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	95.48123724935	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGGTGGTGGTTTGTG	NA	False	NA	-4	True	AATAAA	-13	NA	61288582	61264272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61268031_61268083_61269608_61270696_61270883_61288180
ES.2890.5	chr10	-	2683	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-177	3278	-177	1051	multi-exon	FALSE	canonical	3	200	junction_2	2.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGTCATTGGGCTA	NA	False	NA	2	True	ATTAAA	-41	NA	61288617	61267547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61269608_61270696_61270883_61288180
ES.2890.6	chr10	-	2489	4	NNC	ENSMUSG00000020091.16	novel	1422	4	NA	NA	-127	1042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.48123724935	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTAAGCTGTGCTGTC	NA	False	NA	-7	True	ATTAAA	-32	NA	61288567	61267556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61269608_61270696_61270883_61288180_61288368_61288502
ES.2890.7	chr10	-	2544	4	NNC	ENSMUSG00000020091.16	novel	1422	4	NA	NA	-126	1033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.48123724935	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTTGGGAAAACGTAAGC	NA	False	NA	-16	True	ATTAAA	-23	NA	61288566	61267565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61269608_61270696_61270883_61288180_61288386_61288455
ES.2890.9	chr10	-	2452	4	NNC	ENSMUSG00000020091.16	novel	1422	4	NA	NA	-142	1028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	95.48123724935	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAGTCTTGGGAAAACG	NA	False	NA	-21	True	ATTAAA	-18	NA	61288582	61267570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61269608_61270696_61270883_61288180_61288377_61288549
ES.28900.1	chr6	-	3116	4	NNC	ENSMUSG00000068299.12	novel	3019	4	NA	NA	239	1	intron_retention	FALSE	canonical	2	2	junction_3	6.37704215656966	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGTGGATCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	85881627	85876031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85878596_85878934_85879080_85879173_85879309_85881355
ES.28900.2	chr6	-	5483	3	ISM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-81	-1	-81	1	intron_retention	FALSE	canonical	3	15	junction_1	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGTGGATCTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	85881947	85876031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_85878596_85878934_85879080_85879173
ES.28900.5	chr6	-	3112	4	FSM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	-95	2	-95	-2	multi-exon	FALSE	canonical	2	6	junction_3	4.49691252107735	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCGGGTGGATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	85881961	85876034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85878596_85878934_85879080_85879173_85879312_85881693
ES.28901.1	chr6	-	998	2	FSM	ENSMUSG00000057103.12	ENSMUST00000239124.2	1008	2	7	3	-4	2	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATTCTAATGCATGTG	9881	False	NA	NA	False	NA	NA	NA	85892652	85887141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85888003_85892515
ES.28901.2	chr6	-	1578	1	NIC	ENSMUSG00000057103.12	novel	1021	2	NA	NA	8	-3451	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCTATTTTTTTTTT	9893	False	NA	NA	False	AATAAA	-12	NA	85892640	85891062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85891100_85892600
ES.28902.1	chr6	-	4338	11	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-11	22375	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.437582684794	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATAGTGAACATATACAA	7309	False	NA	NA	False	NA	NA	NA	85938660	85896874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85896885_85921472_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.10	chr6	-	4333	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-6	-2213	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTTAAGTATGTTACA	7314	False	NA	-8	True	AATAAA	-24	NA	85938655	85921462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.11	chr6	-	4324	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-1	-2218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	116.735958258873	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATATTTAAGTATG	7344	False	NA	-13	True	AATAAA	-19	NA	85938625	85921467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927569_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.12	chr6	-	5553	9	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	33	-2248	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	105.362173003408	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAATAAAAATACAAA	9735	False	NA	-43	True	NA	NA	NA	85936234	85921497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85930747_85932383_85935565_85935698_85936197
ES.28902.14	chr6	-	1432	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	-16	5019	-16	456	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCGTAGTGTTTTTA	7304	False	NA	56	True	NA	NA	NA	85938665	85924268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ES.28902.15	chr6	-	1221	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	3	5211	3	264	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTACTGTCCTGA	7323	False	NA	0	True	NA	NA	NA	85938646	85924460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ES.28902.16	chr6	-	6276	8	NIC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	4	231	intron_retention	FALSE	canonical	3	240	junction_6	14.8598898559381	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAAACTTTCTGAACA	7324	False	NA	-33	True	AATAAA	-16	NA	85938645	85924493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85935698_85936197_85936274_85938419
ES.28902.17	chr6	-	3044	8	NIC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	3	228	intron_retention	FALSE	canonical	0	0	junction_3	112.304069746526	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGAAAACTTTCTGA	7323	False	NA	-36	True	AATAAA	-13	NA	85938646	85924496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85924759_85926599_85926780_85926999_85927076_85929286_85929348_85930352_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.18	chr6	-	3855	8	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	805	228	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	117.869003732179	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAGAAAACTTTCTGA	NA	False	NA	-36	True	AATAAA	-13	NA	85935462	85924496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85933036_85933115
ES.28902.19	chr6	-	6166	9	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	8	224	intron_retention	TRUE	non_canonical	0	0	junction_6	88.9226313994362	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATTTAGAAAACTTT	7353	False	NA	-40	True	AATAAA	-9	NA	85938616	85924500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85933036_85933109_85935698_85936197_85936274_85938419
ES.28902.2	chr6	-	176	1	Intergenic	novelGene_24015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATACTATAGTT	2233	False	NA	NA	False	NA	NA	NA	85913439	85913263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_85913300_85913400
ES.28902.20	chr6	-	2785	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	7	222	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	100.815563172448	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAGAATTTAGAAAACT	7352	False	NA	-42	True	AATAAA	-7	NA	85938617	85924502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85930747_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.3	chr6	-	8326	9	NIC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	44	junction_6	74.584578667443	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7335	False	NA	2	True	NA	NA	NA	85938634	85919249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.4	chr6	-	6459	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	-24	0	-24	0	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7296	False	NA	2	True	NA	NA	NA	85938673	85919249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ES.28902.6	chr6	-	6547	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7313	False	NA	2	True	NA	NA	NA	85938656	85919249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
ES.28902.8	chr6	-	6382	9	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.710202344488	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAGGTGTACTATCTT	7353	False	NA	-3	True	NA	NA	NA	85938616	85919254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_85924759_85926599_85926765_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ES.28902.9	chr6	-	4252	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	-20	2203	-20	-2203	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTACATGATTTTTTA	7300	False	NA	2	True	AATAAA	-34	NA	85938669	85921452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ES.28903.1	chr6	+	178	1	Intergenic	novelGene_24016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACATTTTAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	85948993	85949171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_85949000_85949200
ES.28904.1	chr6	+	772	3	FSM	ENSMUSG00000030001.5	ENSMUST00000032070.4	759	3	-15	2	-15	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGCTTGCTTGGAGAT	NA	False	NA	NA	False	ATTAAA	-20	NA	85994157	85997976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_85994440_85995560_85995714_85997639
ES.28905.1	chr6	+	4658	6	FSM	ENSMUSG00000029999.15	ENSMUST00000032066.13	4527	6	-131	0	-131	0	multi-exon	FALSE	canonical	2	3	junction_4	2.89827534923789	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGACTGAAGTTTTTC	NA	False	NA	NA	False	AATGAA	-21	NA	86172073	86252701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929
ES.28905.2	chr6	+	1277	6	FSM	ENSMUSG00000029999.15	ENSMUST00000032066.13	4527	6	2	3248	2	252	multi-exon	FALSE	canonical	2	3	junction_4	2.89827534923789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAATCTCTTTATGTC	NA	False	NA	NA	False	NA	NA	NA	86172206	86249453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929
ES.28906.1	chr6	+	159	1	Intergenic	novelGene_24017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	86294781	86294940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86294800_86294900
ES.28907.1	chr6	+	193	1	Intergenic	novelGene_24018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAAAGCAATGGCA	NA	False	NA	11	True	NA	NA	NA	86304188	86304381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86304200_86304400
ES.28908.1	chr6	+	308	1	FSM	ENSMUSG00000072940.6	ENSMUST00000119024.2	210	1	-22	-76	-22	76	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAAGTAAATA	NA	False	NA	NA	False	AATAAA	-12	NA	86310990	86311298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86311000_86311300
ES.28909.1	chr6	+	153	1	Intergenic	novelGene_24019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	86313806	86313959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86313800_86314000
ES.2891.1	chr10	+	3497	4	ISM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	-29	31662	-29	-31662	5prime_fragment	FALSE	canonical	3	23	junction_1	4.92160768674447	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTTT	1745	False	NA	NA	False	NA	NA	NA	61311550	61386908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826
ES.2891.2	chr10	+	3209	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	8	-1	8	1	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGGTGCTTGGTGTCTT	1782	False	NA	4	True	AATAAA	-21	NA	61311587	61418571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
ES.2891.3	chr10	+	3045	4	NIC	ENSMUSG00000037151.9	novel	3216	5	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.0855260988773	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGCTGGTGCTTGGTGTC	1794	False	NA	2	True	AATAAA	-19	NA	61311599	61418569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61311669_61318114_61318262_61383826_61383995_61415908
ES.2891.4	chr10	+	3558	6	NNC	ENSMUSG00000037151.9	novel	3216	5	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.5634390196315	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGCTGGTGCTTGGTG	1800	False	NA	0	True	AATAAA	-17	NA	61311605	61418567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61311669_61318114_61318262_61356233_61356605_61362838_61362989_61383826_61383995_61415908
ES.2891.5	chr10	+	216	1	Intergenic	novelGene_2219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTCTGTGAGGTCG	NA	False	NA	NA	False	NA	NA	NA	61323188	61323404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61323200_61323400
ES.2891.6	chr10	+	176	1	Intergenic	novelGene_2222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAACTAACATA	4788	False	NA	NA	False	NA	NA	NA	61356795	61356971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61356800_61357000
ES.2891.7	chr10	+	174	1	Intergenic	novelGene_2223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTTTTTTCCCAT	6519	False	NA	NA	False	NA	NA	NA	61358526	61358700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61358500_61358700
ES.28910.1	chr6	+	1669	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	-19	-7	-19	7	multi-exon	FALSE	canonical	3	1740	junction_2	62	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGGGTAGTGATATATC	8598	False	NA	39	True	AATAAA	-23	NA	86342608	86347047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342802_86343591_86343733_86345712
ES.28910.10	chr6	+	1938	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	40	-335	-28	335	multi-exon	FALSE	canonical	3	1740	junction_2	62	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCCTGCTTTGAGGTC	8657	False	NA	NA	False	NA	NA	NA	86342667	86347375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342802_86343591_86343733_86345712
ES.28910.11	chr6	+	3575	2	ISM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	47	1	-21	-1	intron_retention	FALSE	canonical	3	1864	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCTTATGGGTAGT	8664	False	NA	31	True	AATAAA	-15	NA	86342674	86347039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86342802_86343591
ES.28910.13	chr6	+	3452	6	Fusion	ENSMUSG00000057278.9_ENSMUSG00000057497.9	novel	1055	4	NA	NA	-1	-3	multi-exon	FALSE	canonical	3	1740	junction_2	743.488264870401	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCGTTTCTGCTGTTGT	8684	False	NA	26	True	AATAAA	-17	NA	86342694	86355886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_86342802_86343591_86343733_86345712_86348597_86352658_86352682_86353476_86353602_86355714
ES.28910.14	chr6	+	1472	4	NNC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	850.977999454484	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCTTATGGGTAGT	8697	False	NA	31	True	AATAAA	-15	NA	86342707	86347039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86342802_86343591_86343733_86345712_86346094_86346183
ES.28910.15	chr6	+	2561	3	FSM	ENSMUSG00000057278.9	ENSMUST00000203782.3	357	3	-55	-2149	-55	-3	multi-exon	FALSE	canonical	3	2623	junction_2	41	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCGTTTCTGCTGTTGT	NA	False	NA	26	True	AATAAA	-17	NA	86348468	86355886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86348597_86352658_86352682_86353476
ES.28910.16	chr6	+	1869	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	196	-1010	-42	1010	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGTCTAGACTCAAAC	NA	False	NA	NA	False	NA	NA	NA	86348481	86357320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ES.28910.17	chr6	+	404	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1909	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGCGTTTCTGCTGTT	NA	False	NA	24	True	AATAAA	-15	NA	86348498	86355884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86348601_86353469_86353602_86355714
ES.28910.18	chr6	+	4458	3	NIC	ENSMUSG00000057278.9	novel	746	4	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	2623	junction_1	597.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGCGTTTCTGCTGTTG	NA	False	NA	25	True	AATAAA	-16	NA	86348519	86355885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86352682_86353476_86353602_86355714
ES.28910.19	chr6	+	1455	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	235	-635	-3	635	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGCCAGTCTGGCTAA	NA	False	NA	NA	False	NA	NA	NA	86348520	86356945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ES.28910.2	chr6	+	565	2	ISM	ENSMUSG00000057497.9	ENSMUST00000204893.2	448	3	-57	1777	21	2	5prime_fragment	FALSE	canonical	3	1864	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCCTTAAAATGTATA	8638	False	NA	4	True	AATACA	-19	NA	86342648	86344003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86342802_86343591
ES.28910.20	chr6	+	428	4	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1236.25842318218	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGCGTTTCTGCTGTT	NA	False	NA	24	True	AATAAA	-15	NA	86348525	86355884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86348597_86352616_86352682_86353476_86353599_86355714
ES.28910.21	chr6	+	390	4	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1255.79651571777	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGCGTTTCTGCTGTT	NA	False	NA	24	True	AATAAA	-15	NA	86348528	86355884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86348597_86352658_86352682_86353476_86353606_86355714
ES.28910.22	chr6	+	5232	2	NIC	ENSMUSG00000057278.9	novel	746	4	NA	NA	14	-7	intron_retention	FALSE	canonical	3	3818	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGTGCGTTTCTGCTG	NA	False	NA	22	True	AATAAA	-13	NA	86348537	86355882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86353602_86355714
ES.28910.3	chr6	+	497	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	22	1124	22	136	multi-exon	FALSE	canonical	3	1740	junction_2	62	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGGACTGCGGGCAG	8639	False	NA	14	True	AATAAA	-15	NA	86342649	86345916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342802_86343591_86343733_86345712
ES.28910.4	chr6	+	1467	2	NIC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	34	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCTTATGGGTAGT	8651	False	NA	31	True	AATAAA	-15	NA	86342661	86347039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86342802_86345712
ES.28910.5	chr6	+	4379	1	FSM	ENSMUSG00000057497.9	ENSMUST00000203237.2	1306	1	-34	-3039	34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8651	False	NA	32	True	AATAAA	-16	NA	86342661	86347040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342700_86347000
ES.28910.6	chr6	+	4436	3	FSM	ENSMUSG00000057278.9_ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	34	-2827	34	2827	multi-exon	FALSE	canonical	3	1740	junction_2	62	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTCTGACATTTTAAAA	8651	False	NA	NA	False	NA	NA	NA	86342661	86349867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342802_86343591_86343733_86345712
ES.28910.7	chr6	+	2309	3	NNC	ENSMUSG00000057497.9	novel	1643	3	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	854.5	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCTTATGGGTAGT	8651	False	NA	31	True	AATAAA	-15	NA	86342661	86347039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86343503_86343591_86343733_86345712
ES.28910.9	chr6	+	4569	3	FSM	ENSMUSG00000057278.9_ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	36	-2962	-32	2962	multi-exon	FALSE	canonical	3	1740	junction_2	62	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCAGTGTCCTCTGATTC	8653	False	NA	NA	False	NA	NA	NA	86342663	86350002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86342802_86343591_86343733_86345712
ES.28911.1	chr6	-	2462	1	Antisense	novelGene_ENSMUSG00000057497.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTTCTCCTTTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	86343596	86341134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_86341100_86343600
ES.28912.1	chr6	+	187	1	Intergenic	novelGene_24020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86357358	86357545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86357400_86357500
ES.28913.1	chr6	-	4356	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	13	-74	0	74	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATATAACCTACTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	86374123	86362913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.10	chr6	-	5707	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	-7	-620	intron_retention	FALSE	canonical	3	179	junction_3	13.5531361684298	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTTTCTCTTCTTTT	NA	False	NA	-8	True	ATTAAA	-13	NA	86374108	86363607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86366354_86368657_86368811_86369118_86371566_86372895_86373103_86373954
ES.28913.11	chr6	-	3434	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	21	840	8	-840	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGCAGCGCGCCTCC	NA	False	NA	96	True	AATATA	-25	NA	86374115	86363827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.12	chr6	-	3185	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	16	-852	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	76.6823806359714	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTACGGTGGATTTGTG	NA	False	NA	84	True	AATATA	-13	NA	86374085	86363839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86373954
ES.28913.13	chr6	-	3323	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	10	962	-1	-962	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTTTTTTCTAATTC	NA	False	NA	-26	True	ATTAAA	-19	NA	86374126	86363949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.14	chr6	-	3875	6	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	2	-964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.4669863405117	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGCTTTTTTCTAAT	NA	False	NA	-28	True	ATTAAA	-17	NA	86374099	86363951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86366354_86368657_86368811_86369118_86369331_86370809_86371566_86372895_86373103_86373954
ES.28913.15	chr6	-	3207	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	10	1078	-1	-1078	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTCTTAAAAATTATTTT	NA	False	NA	-2	True	AATAAA	-17	NA	86374126	86364065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.17	chr6	-	3702	6	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	16	-1086	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	75.6772092508702	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCTGATTCTTAAAA	NA	False	NA	-10	True	AATAAA	-9	NA	86374085	86364073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86366354_86368657_86368811_86369118_86369331_86370846_86371566_86372895_86373103_86373954
ES.28913.18	chr6	-	2353	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	51	1891	16	774	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTATTTAATATATAAAC	NA	False	NA	NA	False	NA	NA	NA	86374085	86364878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.19	chr6	-	2185	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	51	2059	16	606	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCAGTTTATACTCTTT	NA	False	NA	NA	False	NA	NA	NA	86374085	86365046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.2	chr6	-	3787	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	51	457	16	-457	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCACCAGCTCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	86374085	86363444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.3	chr6	-	3704	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	-18	609	-18	-609	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTTTTCTTTTCTTTC	NA	False	NA	3	True	ATTAAA	-24	NA	86374154	86363596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.5	chr6	-	3562	7	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	16	-617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.9992063447071	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTCTCTTCTTTTTCT	NA	False	NA	-5	True	ATTAAA	-16	NA	86374085	86363604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86364325_86364389_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.6	chr6	-	4209	6	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	0	-617	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	75.6772092508702	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTCTCTTCTTTTTCT	NA	False	NA	-5	True	ATTAAA	-16	NA	86374123	86363604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86366354_86368657_86368811_86369118_86369331_86370846_86371566_86372895_86373103_86373954
ES.28913.7	chr6	-	3506	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	4	-619	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	81.6222243019632	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	86374119	86363606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86366354_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ES.28913.8	chr6	-	5673	6	NNC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	3	-619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.4669863405117	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	86374120	86363606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86366354_86368657_86368811_86369118_86370623_86370669_86371566_86372895_86373103_86373954
ES.28913.9	chr6	-	3452	5	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	3	-620	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	76.6823806359714	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTTTCTCTTCTTTT	NA	False	NA	-8	True	ATTAAA	-13	NA	86374120	86363607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86373954
ES.28914.1	chr6	+	3630	12	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-94	-431	intron_retention	FALSE	canonical	0	0	junction_1	61.5870008823774	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9587	False	NA	8	True	ATTAAA	-21	NA	86381106	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381206_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.10	chr6	+	5086	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	23	-430	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9720	False	NA	9	True	ATTAAA	-22	NA	86381239	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.100	chr6	+	2217	8	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	51	-11392	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	13.3737482725354	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAACAACAACA	1519	False	NA	NA	False	NA	NA	NA	86415421	86435537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415470_86420708_86420958_86422415_86423251_86424322_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797
ES.28914.101	chr6	+	3056	11	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	-18	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.824127874816	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	1753	False	NA	NA	False	AATAAA	-23	NA	86415655	86447367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.102	chr6	+	2529	10	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	12.4612981112436	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATGGTGCCATTGATG	1765	False	NA	NA	False	AATAAA	-20	NA	86415667	86447364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415830_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86442782_86442946_86446727
ES.28914.104	chr6	+	4993	10	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	4	-1385	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	12.2393818935354	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGGGTATTTTGTCTTT	1775	False	NA	NA	False	AATAAA	-30	NA	86415677	86445544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782
ES.28914.105	chr6	+	2976	10	NIC	ENSMUSG00000046679.17	novel	2922	10	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.7182531580755	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATGGTGCCATTGATG	1776	False	NA	NA	False	AATAAA	-20	NA	86415678	86447364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.106	chr6	+	2692	12	NNC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.8962456748768	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1781	False	NA	NA	False	AATAAA	-26	NA	86415683	86447370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415830_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86433801_86433874_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.107	chr6	+	2902	10	NNC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.97156450941537	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1782	False	NA	NA	False	AATAAA	-26	NA	86415684	86447370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86416167_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.108	chr6	+	781	1	NIC	ENSMUSG00000046679.17	novel	2523	10	NA	NA	-3	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCCATTTCTCGGGTC	1784	False	NA	NA	False	AGTAAA	-13	NA	86415686	86416467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415700_86416500
ES.28914.109	chr6	+	4187	3	ISM	ENSMUSG00000046679.17	ENSMUST00000113698.8	2922	10	-5	21554	-5	3013	intron_retention	FALSE	canonical	1	1	junction_1	17	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTTGCCTATGTAT	1801	False	NA	NA	False	ATTAAA	-14	NA	86415703	86425816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86416241_86420708_86420958_86422415
ES.28914.11	chr6	+	3404	14	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	27	junction_9	59.3319814574622	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9726	False	NA	15	True	AATAAA	-17	NA	86381245	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.110	chr6	+	2711	9	ISM	ENSMUSG00000046679.17	ENSMUST00000113700.8	2523	10	4747	-3	-374	3	3prime_fragment	FALSE	canonical	3	18	junction_2	6.17960354715414	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTGATGTCATGATTT	6518	False	NA	NA	False	AATAAA	-29	NA	86420420	86447373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.111	chr6	+	4850	3	ISM	ENSMUSG00000046679.17	ENSMUST00000113698.8	2922	10	19897	14	-5416	-14	3prime_fragment	FALSE	canonical	3	26	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTTTCCAAATGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	86435605	86447356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86439664_86442782_86442946_86446727
ES.28914.12	chr6	+	3634	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	45	798	-18	422	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTTCATCCTGGTA	9726	False	NA	NA	False	AATAAA	-23	NA	86381245	86409589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.13	chr6	+	5918	11	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	27	junction_6	51.9847092903288	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAAAGTTCTTTTTT	9731	False	NA	NA	False	AATAAA	-15	NA	86381250	86410387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.14	chr6	+	4756	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	27	junction_7	63.1136977444295	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9732	False	NA	15	True	AATAAA	-17	NA	86381251	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.15	chr6	+	900	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203206.2	935	1	35	0	-12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCGACTAGTGGTTGAC	9732	False	NA	NA	False	ATTAAA	-15	NA	86381251	86382151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381300_86382200
ES.28914.16	chr6	+	4473	12	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-12	77	intron_retention	FALSE	canonical	3	93	junction_5	32.626866179488	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACACACCAGGATGCTAT	9732	False	NA	99	True	AATAAA	-39	NA	86381251	86409244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.17	chr6	+	2165	5	NIC	ENSMUSG00000071337.12	novel	1290	12	NA	NA	-10	-1013	intron_retention	FALSE	canonical	2	5	junction_4	80.6950277278594	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACCAAAAGGAATT	9734	False	NA	NA	False	NA	NA	NA	86381253	86398088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86396795_86397305
ES.28914.18	chr6	+	5168	11	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	-5	-431	intron_retention	FALSE	canonical	3	93	junction_4	34.1115816109426	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9739	False	NA	8	True	ATTAAA	-21	NA	86381258	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.19	chr6	+	4549	11	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	93	junction_4	34.1115816109426	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9740	False	NA	15	True	AATAAA	-17	NA	86381259	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.2	chr6	+	3822	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-80	-612	-2	-430	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9695	False	NA	9	True	ATTAAA	-22	NA	86381214	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.20	chr6	+	7415	11	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-3	-436	intron_retention	FALSE	canonical	3	93	junction_5	33.1306504614685	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGACCTGTGGGGTCTTC	9741	False	NA	3	True	ATTAAA	-16	NA	86381260	86409773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654
ES.28914.21	chr6	+	3928	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	50	junction_6	43.3781819197931	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9742	False	NA	15	True	AATAAA	-17	NA	86381261	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.22	chr6	+	4060	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	27	junction_8	54.4693466292944	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9743	False	NA	15	True	AATAAA	-17	NA	86381262	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.23	chr6	+	4682	11	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	27	junction_6	51.9847092903288	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTGTAAACTTCTAC	9746	False	NA	21	True	AATAAA	-23	NA	86381265	86409166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.24	chr6	+	3352	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	27	junction_8	66.5104419537932	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9747	False	NA	17	True	AATAAA	-19	NA	86381266	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.25	chr6	+	11325	9	NNC	ENSMUSG00000071337.12	novel	3856	11	NA	NA	-3	-433	intron_retention	TRUE	non_canonical	0	0	junction_3	77.5918810185705	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9750	False	NA	6	True	ATTAAA	-19	NA	86381269	86409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86393384_86395859_86397603_86397658_86401403_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.26	chr6	+	1936	14	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.3903787622704	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAAAGTTCTTTTTT	9753	False	NA	NA	False	AATAAA	-15	NA	86381272	86410387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407396_86409864
ES.28914.27	chr6	+	3803	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	0	-430	intron_retention	FALSE	canonical	1	1	junction_2	54.6221871892122	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9753	False	NA	9	True	ATTAAA	-22	NA	86381272	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390889_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.28	chr6	+	3197	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACTTGTGCAAAGTCT	9753	False	NA	NA	False	AATATA	-23	NA	86381272	86407755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.29	chr6	+	3243	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9754	False	NA	15	True	AATAAA	-17	NA	86381273	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.3	chr6	+	3883	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	2	-431	intron_retention	FALSE	canonical	3	30	junction_4	60.5421684998701	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9699	False	NA	8	True	ATTAAA	-21	NA	86381218	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.30	chr6	+	5642	21	Fusion	ENSMUSG00000046679.17_ENSMUSG00000071337.12	novel	1789	14	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_11	72.5636789309914	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	9754	False	NA	NA	False	AATAAA	-26	NA	86381273	86447370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.31	chr6	+	3961	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	1	-431	intron_retention	FALSE	canonical	3	27	junction_8	66.5104419537932	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9754	False	NA	8	True	ATTAAA	-21	NA	86381273	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.32	chr6	+	5273	11	FSM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	-11	-1406	2	-2	multi-exon	FALSE	canonical	3	50	junction_4	43.462742665414	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9755	False	NA	15	True	AATAAA	-17	NA	86381274	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.33	chr6	+	3316	13	NNC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	62.8164765186828	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9755	False	NA	17	True	AATAAA	-19	NA	86381274	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404649_86404801_86407222
ES.28914.34	chr6	+	3286	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-4	intron_retention	FALSE	canonical	1	1	junction_5	63.2134544887587	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTATTTCTTTGTAA	9762	False	NA	13	True	AATAAA	-15	NA	86381281	86409158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86396675_86396795_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.35	chr6	+	5276	11	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-2	-431	intron_retention	FALSE	canonical	3	27	junction_6	51.9847092903288	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9764	False	NA	8	True	ATTAAA	-21	NA	86381283	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.36	chr6	+	2023	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	83	2371	-2	-167	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGATAATTGCATTCATC	9764	False	NA	NA	False	AATGAA	-42	NA	86381283	86408016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.37	chr6	+	3981	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_5	61.2582760848597	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9764	False	NA	17	True	AATAAA	-19	NA	86381283	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396795_86397305_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.38	chr6	+	3003	5	ISM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	-2	6115	-2	23	5prime_fragment	FALSE	canonical	3	50	junction_4	61.4878036686951	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCAAAATGTTTTGTCA	9764	False	NA	NA	False	AGTAAA	-37	NA	86381283	86401639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587
ES.28914.39	chr6	+	2133	5	ISM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	-2	6985	-2	-62	5prime_fragment	FALSE	canonical	3	50	junction_4	61.4878036686951	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGTGTTTGTGTATC	9764	False	NA	NA	False	TATAAA	-39	NA	86381283	86400769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587
ES.28914.4	chr6	+	3847	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	22	608	6	-430	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9703	False	NA	9	True	ATTAAA	-22	NA	86381222	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.40	chr6	+	3247	12	NIC	ENSMUSG00000071337.12	novel	1290	12	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_4	80.1899604194073	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9767	False	NA	15	True	AATAAA	-17	NA	86381286	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86396116_86396675_86396795_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86407222
ES.28914.41	chr6	+	4414	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-6	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATTTTATTTCTTTGT	9769	False	NA	11	True	AATAAA	-13	NA	86381288	86409156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.42	chr6	+	2753	2	NNC	ENSMUSG00000071337.12	novel	422	2	NA	NA	3	3406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTGGATTCCATTT	9769	False	NA	NA	False	AATAAA	-13	NA	86381288	86387503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86383517_86386978
ES.28914.43	chr6	+	7606	11	NIC	ENSMUSG00000071337.12	novel	3856	11	NA	NA	3	-431	intron_retention	FALSE	canonical	3	32	junction_4	56.1523819619435	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9769	False	NA	8	True	ATTAAA	-21	NA	86381288	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.44	chr6	+	3965	15	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-431	intron_retention	FALSE	canonical	1	1	junction_5	68.7021076229597	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9769	False	NA	8	True	ATTAAA	-21	NA	86381288	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86396675_86396795_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.45	chr6	+	3979	14	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	3	-431	intron_retention	FALSE	canonical	3	27	junction_9	59.3319814574622	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9769	False	NA	8	True	ATTAAA	-21	NA	86381288	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.46	chr6	+	5204	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	3	-431	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9769	False	NA	8	True	ATTAAA	-21	NA	86381288	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.47	chr6	+	3489	12	NNC	ENSMUSG00000071337.12	novel	1203	12	NA	NA	3	-2	intron_retention	FALSE	canonical	2	2	junction_10	73.6438828933083	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9769	False	NA	15	True	AATAAA	-17	NA	86381288	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86407222_86407396_86408054
ES.28914.48	chr6	+	5088	12	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-5	intron_retention	FALSE	canonical	3	50	junction_5	41.4621205200184	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTTATTTCTTTGTA	9769	False	NA	12	True	AATAAA	-14	NA	86381288	86409157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.49	chr6	+	2725	11	NIC	ENSMUSG00000071337.12	novel	1203	12	NA	NA	3	-16	intron_retention	FALSE	canonical	2	2	junction_10	68.2238228187193	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	9769	False	NA	NA	False	AATATA	-5	NA	86381288	86407737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86407222
ES.28914.5	chr6	+	5077	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	11	423	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTCATCCTGGTAT	9708	False	NA	NA	False	AATAAA	-24	NA	86381227	86409590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.50	chr6	+	3197	14	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_5	62.8255780270892	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9769	False	NA	15	True	AATAAA	-17	NA	86381288	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397336_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.51	chr6	+	3248	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_4	65.7957171014108	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9769	False	NA	15	True	AATAAA	-17	NA	86381288	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396675_86396795_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.52	chr6	+	4752	10	NIC	ENSMUSG00000071337.12	novel	1203	12	NA	NA	3	429	intron_retention	FALSE	canonical	2	2	junction_9	71.5383001968996	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCCTGGTATAAGTAT	9769	False	NA	NA	False	AATAAA	-30	NA	86381288	86409596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86407222
ES.28914.53	chr6	+	3900	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3	-430	intron_retention	FALSE	canonical	1	1	junction_5	63.2134544887587	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9769	False	NA	9	True	ATTAAA	-22	NA	86381288	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86396675_86396795_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.55	chr6	+	1836	11	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	4	-169	intron_retention	FALSE	canonical	2	3	junction_10	64.8910625587222	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCGATAATTGCATTCA	9770	False	NA	NA	False	AATGAA	-40	NA	86381289	86408014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86407222
ES.28914.56	chr6	+	4484	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	27	junction_7	49.580888080085	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	9770	False	NA	15	True	AATAAA	-17	NA	86381289	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.57	chr6	+	4967	12	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-433	intron_retention	FALSE	canonical	3	93	junction_5	32.626866179488	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9770	False	NA	6	True	ATTAAA	-19	NA	86381289	86409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.58	chr6	+	8398	11	NNC	ENSMUSG00000071337.12	novel	3856	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_4	56.1338578756173	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9770	False	NA	17	True	AATAAA	-19	NA	86381289	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397603_86397658_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.59	chr6	+	1195	7	NIC	ENSMUSG00000071337.12	novel	823	8	NA	NA	4	-210	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	55.5230182496913	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGGTGAACTTTTAT	9770	False	NA	NA	False	AATAAA	-13	NA	86381289	86401195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587
ES.28914.6	chr6	+	4646	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	11	-3	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTATTTCTTTGTAAA	9708	False	NA	14	True	AATAAA	-16	NA	86381227	86409159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.60	chr6	+	4071	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-5	intron_retention	FALSE	canonical	2	5	junction_4	64.3685136969587	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTTATTTCTTTGTA	9770	False	NA	12	True	AATAAA	-14	NA	86381289	86409157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86396795_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.61	chr6	+	1340	13	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.5812581574861	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGTTAAGTGTGGTGAT	9770	False	NA	NA	False	AGTAAA	-36	NA	86381289	86404882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397336_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654
ES.28914.62	chr6	+	8846	12	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-431	intron_retention	FALSE	non_canonical	0	0	junction_5	53.5216029605904	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	9770	False	NA	8	True	ATTAAA	-21	NA	86381289	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397603_86397658_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.63	chr6	+	3805	12	NNC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	4	-432	intron_retention	FALSE	canonical	0	0	junction_11	62.9329959835941	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGGGGTCTTCTTGC	9770	False	NA	7	True	ATTAAA	-20	NA	86381289	86409777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404861_86407222
ES.28914.64	chr6	+	3948	14	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	4	-432	intron_retention	FALSE	canonical	0	0	junction_9	63.2068081120695	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGGGGTCTTCTTGC	9770	False	NA	7	True	ATTAAA	-20	NA	86381289	86409777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402327_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.65	chr6	+	5171	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	4	-428	intron_retention	FALSE	canonical	3	27	junction_8	60.6416500618364	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGTCTTCTTGCAGTG	9770	False	NA	11	True	ATTAAA	-24	NA	86381289	86409781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.66	chr6	+	4676	13	NNC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-4	-436	intron_retention	FALSE	canonical	0	0	junction_12	70.3791320081615	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGACCTGTGGGGTCTTC	9771	False	NA	3	True	ATTAAA	-16	NA	86381290	86409773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407396_86408049
ES.28914.67	chr6	+	4452	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTAAAGTTCTTTTT	9771	False	NA	NA	False	AATAAA	-14	NA	86381290	86410386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.68	chr6	+	4370	14	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_5	62.8255780270892	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9771	False	NA	17	True	AATAAA	-19	NA	86381290	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396280_86396327_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.69	chr6	+	4355	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-4	-1221	-4	1	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAAAGTTCTTTTTTA	9771	False	NA	NA	False	AATAAA	-16	NA	86381290	86410388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.7	chr6	+	3309	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	29	1139	13	81	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCAGGATGCTATCTTT	9710	False	NA	103	True	AATAAA	-43	NA	86381229	86409248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.70	chr6	+	4686	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	-1	-433	intron_retention	FALSE	canonical	2	5	junction_4	64.3685136969587	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9774	False	NA	6	True	ATTAAA	-19	NA	86381293	86409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86396795_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.71	chr6	+	4378	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	94	5	0	-5	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCATTTCTTAAAGTTCT	9775	False	NA	NA	False	AATAAA	-10	NA	86381294	86410382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.72	chr6	+	7034	13	NNC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	53.7522609343603	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9776	False	NA	17	True	AATAAA	-19	NA	86381295	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397603_86397658_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.73	chr6	+	5326	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-1	-433	intron_retention	FALSE	canonical	3	27	junction_7	63.1136977444295	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	9778	False	NA	6	True	ATTAAA	-19	NA	86381297	86409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.74	chr6	+	3672	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	-10	-27	intron_retention	FALSE	canonical	3	27	junction_7	63.1136977444295	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATCTGCAATGTGAT	9812	False	NA	NA	False	AAGAAA	-9	NA	86381331	86408156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.75	chr6	+	8895	22	Fusion	ENSMUSG00000046679.17_ENSMUSG00000071337.12	novel	4477	13	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_5	75.8529129242442	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	9812	False	NA	NA	False	AATAAA	-26	NA	86381331	86447370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397603_86397658_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407396_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.76	chr6	+	3485	5	NNC	ENSMUSG00000071337.12	novel	1178	5	NA	NA	-9	-69	intron_retention	FALSE	non_canonical	0	0	junction_4	82.8371897157309	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	9813	False	NA	NA	False	NA	NA	NA	86381332	86399032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397603_86397658
ES.28914.77	chr6	+	5172	12	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	27	junction_7	54.9393354393043	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9823	False	NA	17	True	AATAAA	-19	NA	86381342	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.78	chr6	+	4536	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	4	-430	intron_retention	FALSE	canonical	2	5	junction_5	61.2582760848597	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	9826	False	NA	9	True	ATTAAA	-22	NA	86381345	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396795_86397305_86397394_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.79	chr6	+	1789	9	NNC	ENSMUSG00000071337.12	novel	3856	11	NA	NA	-10	-23	intron_retention	FALSE	canonical	1	2	junction_1	55.5106971673028	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGCAATGTGATAAGT	NA	False	NA	NA	False	AAGAAA	-13	NA	86396368	86408160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86396496_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.8	chr6	+	3190	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	-65	5	13	0	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTCTTTGTAAACTT	9710	False	NA	17	True	AATAAA	-19	NA	86381229	86409162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.80	chr6	+	4860	8	ISM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	15175	-2020	82	-435	3prime_fragment	FALSE	canonical	3	50	junction_1	42.9047354790892	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTGGGGTCTTCT	NA	False	NA	4	True	ATTAAA	-17	NA	86396460	86409774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86397394_86400587_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.81	chr6	+	3869	9	NNC	ENSMUSG00000071337.12	novel	3856	11	NA	NA	-93	-430	intron_retention	FALSE	canonical	1	1	junction_3	68.7818108223388	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	NA	False	NA	9	True	ATTAAA	-22	NA	86396785	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86397394_86400587_86401403_86401943_86402041_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407396_86408054
ES.28914.82	chr6	+	1998	9	NNC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	56.0736123323618	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	86397305	86409160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407391_86408054
ES.28914.83	chr6	+	4043	7	ISM	ENSMUSG00000071337.12	ENSMUST00000113712.10	4326	13	19303	430	-201	-430	3prime_fragment	FALSE	canonical	3	27	junction_2	52.7351874937408	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGGTCTTCTTGCAG	NA	False	NA	9	True	ATTAAA	-22	NA	86400609	86409779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.84	chr6	+	1740	7	ISM	ENSMUSG00000071337.12	ENSMUST00000134142.8	3856	11	19452	17	-73	-16	3prime_fragment	FALSE	canonical	3	101	junction_4	25.0427412415033	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATATA	-5	NA	86400737	86407737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ES.28914.85	chr6	+	2425	7	NNC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	-7	-431	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	59.2492381573149	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGGGTCTTCTTGCA	NA	False	NA	8	True	ATTAAA	-21	NA	86401975	86409778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407396_86408054
ES.28914.86	chr6	+	6113	1	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	1815	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTTAAAGTTCTTTT	-16	True	NA	NA	False	AATAAA	-13	NA	86404272	86410385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86404300_86410400
ES.28914.87	chr6	+	5191	1	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	2128	-433	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGGGGTCTTCTTG	225	False	NA	6	True	ATTAAA	-19	NA	86404585	86409776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86404600_86409800
ES.28914.88	chr6	+	3050	1	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	3650	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTTATTTCTTTGTA	228	False	NA	12	True	AATAAA	-14	NA	86406107	86409157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86406100_86409200
ES.28914.89	chr6	+	3766	3	ISM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	-3	21555	-3	3012	intron_retention	FALSE	canonical	3	15	junction_1	10	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTCTTGCCTATGTA	1450	False	NA	NA	False	ATTAAA	-13	NA	86415352	86425815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86415470_86420708_86420958_86422415
ES.28914.9	chr6	+	3015	12	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	14	-3	intron_retention	FALSE	canonical	2	2	junction_11	65.9645534666126	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTATTTCTTTGTAAA	9711	False	NA	14	True	AATAAA	-16	NA	86381230	86409159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86407222
ES.28914.90	chr6	+	718	3	NNC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	5.5	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCGGGTCTCAAATTA	1453	False	NA	NA	False	ATTAAA	-6	NA	86415355	86416475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415470_86415591_86415830_86416109
ES.28914.91	chr6	+	6056	10	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	12.905162140653	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1453	False	NA	NA	False	AATAAA	-26	NA	86415355	86447370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415466_86420708_86420958_86422415_86423251_86424322_86424404_86426742_86426848_86430590_86430696_86431241_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.92	chr6	+	2706	12	NNC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12.2089250648724	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGGTGCCATTGATGT	1461	False	NA	NA	False	AATAAA	-21	NA	86415363	86447365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415470_86416109_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.93	chr6	+	2508	10	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.97156450941537	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCAAATGGTGCCATTG	1466	False	NA	NA	False	AATAAA	-17	NA	86415368	86447361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415466_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.94	chr6	+	1620	9	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.916375287813	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	1472	False	NA	NA	False	AATAAA	-23	NA	86415374	86447367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415470_86420708_86420958_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.95	chr6	+	2561	11	NIC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	10.3058235963944	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGCCATTGATGTCAT	1478	False	NA	NA	False	AATAAA	-24	NA	86415380	86447368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.96	chr6	+	2734	11	NNC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.82852990024449	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATGGTGCCATTGATG	1481	False	NA	NA	False	AATAAA	-20	NA	86415383	86447364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415466_86415591_86415830_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.97	chr6	+	2594	11	NNC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.7936423550996	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGGTGCCATTGATGTC	1482	False	NA	NA	False	AATAAA	-22	NA	86415384	86447366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86425497_86425591_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.98	chr6	+	2609	12	NNC	ENSMUSG00000046679.17	novel	2534	10	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.865638981098	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	1501	False	NA	NA	False	AATAAA	-23	NA	86415403	86447367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86431241_86431296_86433801_86433874_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ES.28914.99	chr6	+	4306	3	ISM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	49	20963	34	3604	intron_retention	FALSE	canonical	3	15	junction_1	10	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTTGTCTTGTGTGTA	1502	False	NA	NA	False	NA	NA	NA	86415404	86426407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86415470_86420708_86420958_86422415
ES.28915.1	chr6	-	171	1	Intergenic	novelGene_24021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGATCTTTTAAAAAA	2969	False	NA	0	True	NA	NA	NA	86385737	86385566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86385600_86385700
ES.28916.1	chr6	-	174	1	Intergenic	novelGene_24022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86424688	86424514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86424500_86424700
ES.28917.1	chr6	-	143	1	Intergenic	novelGene_24023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	9833	False	NA	NA	False	NA	NA	NA	86428794	86428651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86428700_86428800
ES.28918.1	chr6	-	333	1	Intergenic	novelGene_24024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	86459484	86459151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86459200_86459500
ES.28919.1	chr6	+	175	1	Intergenic	novelGene_24025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTCACCCTGT	NA	False	NA	NA	False	NA	NA	NA	86460163	86460338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86460200_86460300
ES.2892.1	chr10	-	291	1	Intergenic	novelGene_2220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	61324034	61323743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61323700_61324000
ES.28920.1	chr6	-	156	1	Intergenic	novelGene_24026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGGTAAACAAA	8171	False	NA	NA	False	NA	NA	NA	86464034	86463878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86463900_86464000
ES.28921.1	chr6	-	191	1	Intergenic	novelGene_24027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATGAAGAACTCAG	6449	False	NA	NA	False	NA	NA	NA	86465756	86465565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86465600_86465800
ES.28922.1	chr6	+	180	1	Intergenic	novelGene_24028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAGACAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	86466392	86466572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86466400_86466600
ES.28923.1	chr6	+	1548	1	FSM	ENSMUSG00000101210.2	ENSMUST00000190728.2	3156	1	-1328	2936	-1328	-2936	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAAAAAGAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	86470302	86471850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86470300_86471800
ES.28924.1	chr6	-	3574	2	NNC	ENSMUSG00000107876.2	novel	490	2	NA	NA	-2687	594	intron_retention	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGGGGCTAGGATCATA	NA	False	NA	NA	False	NA	NA	NA	86473578	86469603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86472112_86472512
ES.28925.1	chr6	+	1982	1	FSM	ENSMUSG00000100174.2	ENSMUST00000187779.2	1757	1	506	-731	506	731	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCCTCCTGTGAAT	3444	False	NA	NA	False	NA	NA	NA	86476268	86478250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86476300_86478200
ES.28926.1	chr6	+	168	1	Antisense	novelGene_ENSMUSG00000107689.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAAAATAATT	3415	False	NA	NA	False	NA	NA	NA	86490924	86491092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_86490900_86491100
ES.28927.1	chr6	-	1985	1	Genic_Genomic	ENSMUSG00000107689.2	novel	NA	NA	NA	NA	-448	-846	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAGAAGGAA	4091	False	NA	NA	False	NA	NA	NA	86493703	86491718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86491700_86493700
ES.28928.1	chr6	+	4718	6	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	-937	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.0237143910193	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86502291	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86502854_86504872_86505767_86506375_86509290_86518453_86518529_86540413_86540520_86541257
ES.28928.10	chr6	+	1897	5	NNC	ENSMUSG00000097048.8	novel	713	6	NA	NA	-108	-6	intron_retention	FALSE	canonical	1	2	junction_3	47.5841360119105	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503683	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504957_86509136_86509290_86527898_86528097_86540413_86540520_86541257
ES.28928.11	chr6	+	1837	6	NNC	ENSMUSG00000097048.8	novel	609	5	NA	NA	-80	-7	intron_retention	FALSE	canonical	0	0	junction_3	44.9025611741691	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACAGCTGTGTATTTT	NA	False	NA	1	True	NA	NA	NA	86503711	86541423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504957_86509136_86509290_86518453_86518529_86519856_86519949_86540413_86540520_86541257
ES.28928.12	chr6	+	624	5	NNC	ENSMUSG00000097048.8	novel	594	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	37.6231311828242	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86504301	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504416_86504872_86504957_86509136_86509290_86540413_86540520_86541257
ES.28928.13	chr6	+	225	1	Intergenic	novelGene_24035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATTTTGTGTTTTTGA	6945	False	NA	NA	False	AAAAAG	-8	NA	86534263	86534488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86534300_86534500
ES.28928.2	chr6	+	948	5	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	-851	-6	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	39.4865483424419	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86502377	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86502854_86504872_86504957_86509174_86509290_86540413_86540520_86541257
ES.28928.3	chr6	+	942	5	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	-807	-6	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	44.0851448903142	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86502421	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86502854_86504872_86504957_86509136_86509290_86540413_86540520_86541257
ES.28928.4	chr6	+	2147	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	7	-6	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503235	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
ES.28928.5	chr6	+	1963	3	NIC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	14	-6	intron_retention	FALSE	canonical	3	26	junction_1	46.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503266	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86504957_86540413_86540520_86541257
ES.28928.6	chr6	+	1831	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	261	7	261	-6	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503513	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
ES.28928.7	chr6	+	2031	6	NNC	ENSMUSG00000097048.8	novel	713	6	NA	NA	-167	-6	intron_retention	FALSE	canonical	0	0	junction_3	44.6094160463909	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503624	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504957_86509136_86509290_86518453_86518529_86527898_86528097_86540413_86540520_86541257
ES.28928.8	chr6	+	1902	5	NNC	ENSMUSG00000097048.8	novel	609	5	NA	NA	-154	19	intron_retention	FALSE	canonical	1	2	junction_2	50.0967813337344	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTGTCTGTATG	NA	False	NA	28	True	TTTAAA	-4	NA	86503637	86541450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504957_86509174_86509290_86524969_86525139_86540413_86540520_86541257
ES.28928.9	chr6	+	4915	6	NNC	ENSMUSG00000097048.8	novel	594	5	NA	NA	-135	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.3716886611804	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGCTGTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	86503656	86541424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86504416_86504872_86505767_86506375_86509290_86518453_86518529_86540413_86540520_86541257
ES.28929.1	chr6	-	3214	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	149	-1533	149	1533	mono-exon	FALSE	NA	NA	NA	NA	NA	1453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGTACTTATATTTGGC	NA	False	NA	NA	False	AAAAAG	-7	NA	86503154	86499940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86499900_86503200
ES.28929.2	chr6	-	2153	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	149	-472	149	472	mono-exon	FALSE	NA	NA	NA	NA	NA	1453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAGGAGGGCCACAGCT	NA	False	NA	NA	False	NA	NA	NA	86503154	86501001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86501000_86503200
ES.28929.3	chr6	-	2144	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	-282	-32	-282	32	mono-exon	FALSE	NA	NA	NA	NA	NA	1453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTTCGGTTGCTGCTT	NA	False	NA	0	True	NA	NA	NA	86503585	86501441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86501400_86503600
ES.28929.4	chr6	-	1138	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	149	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86503154	86501480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86502102_86502637
ES.28929.5	chr6	-	1508	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	152	-7	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86503151	86501480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86502903_86503065
ES.28929.6	chr6	-	1319	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	355	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	False	NA	29	True	ATTAAA	-15	NA	86502948	86501480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86502764_86502912
ES.28929.7	chr6	-	1115	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	152	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTTCGTATTTGA	NA	False	NA	28	True	ATTAAA	-14	NA	86503151	86501481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86502110_86502664
ES.28929.8	chr6	-	1556	2	Genic_Genomic	ENSMUSG00000051695.7	novel	1830	1	NA	NA	150	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTTCGTATTTGA	NA	False	NA	28	True	ATTAAA	-14	NA	86503153	86501481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_86502913_86503028
ES.2893.1	chr10	-	1315	1	Intergenic	novelGene_2221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCAAAAGATTCCTC	NA	False	NA	NA	False	NA	NA	NA	61337733	61336418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61336400_61337700
ES.28930.1	chr6	-	158	1	Intergenic	novelGene_24029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCCAAAAA	9572	False	NA	NA	False	NA	NA	NA	86506717	86506559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86506600_86506700
ES.28931.1	chr6	-	187	1	Intergenic	novelGene_24030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAGAATACA	5192	False	NA	NA	False	NA	NA	NA	86511097	86510910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86510900_86511100
ES.28932.1	chr6	-	172	1	Intergenic	novelGene_24031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAATTCTTTAAA	4885	False	NA	NA	False	NA	NA	NA	86511404	86511232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86511200_86511400
ES.28933.1	chr6	-	179	1	Intergenic	novelGene_24032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	4228	False	NA	NA	False	NA	NA	NA	86512061	86511882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86511900_86512100
ES.28934.1	chr6	-	174	1	Intergenic	novelGene_24033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCTCACTTG	2727	False	NA	NA	False	NA	NA	NA	86513562	86513388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86513400_86513600
ES.28935.1	chr6	-	178	1	Intergenic	novelGene_24034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTACTCCACAA	NA	False	NA	NA	False	NA	NA	NA	86526870	86526692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86526700_86526900
ES.28936.1	chr6	-	304	1	Intergenic	novelGene_24036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATATCTACTGAGAA	NA	False	NA	NA	False	NA	NA	NA	86535141	86534837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86534800_86535100
ES.28937.1	chr6	+	170	1	Intergenic	novelGene_24037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCTTTAGCTACTGGA	3783	False	NA	73	True	AAAACA	-25	NA	86543493	86543663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86543500_86543700
ES.28938.1	chr6	-	174	1	Antisense	novelGene_ENSMUSG00000097048.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATATATGTAAC	NA	False	NA	NA	False	NA	NA	NA	86558507	86558333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_86558300_86558500
ES.28939.1	chr6	-	198	1	Intergenic	novelGene_24038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAATTAAAAAAAAAAA	4534	False	NA	NA	False	NA	NA	NA	86581433	86581235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86581200_86581400
ES.2894.1	chr10	-	177	1	Intergenic	novelGene_2224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTGCTTCCATT	4721	False	NA	NA	False	NA	NA	NA	61378755	61378578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61378600_61378800
ES.28940.1	chr6	+	1868	1	Intergenic	novelGene_24039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTTTTGGGTGTGA	8569	False	NA	NA	False	AATAAA	-21	NA	86586886	86588754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86586900_86588800
ES.28941.1	chr6	+	1993	5	Genic_Genomic	ENSMUSG00000033508.9	novel	1547	1	NA	NA	-9826	-9	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATGTCATGTGCT	425	False	NA	NA	False	AATAAA	-13	NA	86595319	86606683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_86595419_86602133_86602358_86603030_86603263_86604752_86604898_86605390
ES.28942.1	chr6	-	4986	11	Fusion	ENSMUSG00000001156.10_ENSMUSG00000001158.14	novel	912	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6	junction_5	964.534607984597	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTTCCTGTGTCCC	7651	False	NA	NA	False	AATAAA	-17	NA	86661499	86624025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86652464_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.10	chr6	-	4335	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	5	-3455	0	3455	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTTGTGTGTGTTTCTC	7651	False	NA	NA	False	AATATA	-30	NA	86661499	86648677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.11	chr6	-	890	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	-19	14	-19	-14	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTTTTCTACACATA	7627	False	NA	-13	True	ATTAAA	-15	NA	86661523	86652146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.12	chr6	-	5442	5	NIC	ENSMUSG00000001158.14	novel	885	6	NA	NA	0	-58	intron_retention	FALSE	canonical	3	1763	junction_4	101.767811708811	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACAAATATCTTTATTA	7651	False	NA	-4	True	AATAAA	-28	NA	86661499	86652190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86652563_86653203_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.13	chr6	-	1020	6	FSM	ENSMUSG00000001158.14	ENSMUST00000131674.2	822	6	-9	-189	-9	-65	multi-exon	FALSE	canonical	3	170	junction_5	727.529518301491	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTATTTGACAAATATC	7668	False	NA	-11	True	AATAAA	-21	NA	86661482	86652197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661206
ES.28942.15	chr6	-	5495	5	NNC	ENSMUSG00000001158.14	novel	885	6	NA	NA	0	-69	intron_retention	FALSE	canonical	0	0	junction_2	837.446229617162	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATTTATTTGACAAA	7651	False	NA	-15	True	AATAAA	-17	NA	86661499	86652201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86652563_86653203_86658033_86658572_86658686_86659837_86659959_86661428
ES.28942.17	chr6	-	641	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	4	240	-1	14	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTTTACTTACTTTTC	7650	False	NA	45	True	TATAAA	-23	NA	86661500	86652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.18	chr6	-	161	1	Intergenic	novelGene_24040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	86653687	86653526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86653500_86653700
ES.28942.2	chr6	-	4889	10	Fusion	ENSMUSG00000001156.10_ENSMUSG00000001158.14	novel	912	7	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_7	900.925546039279	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTTCCTGTGTCCC	7668	False	NA	NA	False	AATAAA	-17	NA	86661482	86624025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86652464_86652563_86653203_86653269_86658572_86658686_86659837_86659959_86661428
ES.28942.4	chr6	-	4656	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	5	5	5	-5	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGTCTTCCTGTGT	4028	False	NA	NA	False	AATAAA	-14	NA	86646138	86624028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
ES.28942.5	chr6	-	4831	7	NNC	ENSMUSG00000001156.10	novel	912	7	NA	NA	-74	-5	intron_retention	FALSE	canonical	0	0	junction_3	8.47381587925744	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGTCTTCCTGTGT	3949	False	NA	NA	False	AATAAA	-14	NA	86646217	86624028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86628062_86628423_86628584_86630066_86630182_86635050_86635147_86640052_86640083_86645519_86645617_86645917
ES.28942.7	chr6	-	3095	11	Fusion	ENSMUSG00000001156.10_ENSMUSG00000001158.14	novel	912	7	NA	NA	-2	35	intron_retention	FALSE	canonical	1	1	junction_5	965.039874823833	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTTTGTCTGGTCCTTG	7675	False	NA	NA	False	CATAAA	-22	NA	86661475	86625962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86652394_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ES.28942.8	chr6	-	2754	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	-27	1939	-27	35	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTTTGTCTGGTCCTTG	3996	False	NA	NA	False	CATAAA	-22	NA	86646170	86625962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
ES.28942.9	chr6	-	1851	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	5	2810	5	-836	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAACTAATGTAATGCA	4028	False	NA	NA	False	TATAAA	-18	NA	86646138	86626833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
ES.28943.1	chr6	-	2406	15	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	37	1193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.162760298637	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCACCAACAATAATTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	86710328	86667556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86668152_86669850_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.11	chr6	-	2818	14	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	48	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	138.630964718198	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATATGCTCCTGTT	NA	False	NA	-26	True	AATAAA	-12	NA	86710317	86668757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687380_86687444_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.12	chr6	-	2855	15	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	42	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	164.370661268106	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATATGCTCCTGTT	NA	False	NA	-26	True	AATAAA	-12	NA	86710323	86668757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687380_86687444_86688570_86688662_86691156_86691242_86691531_86691563_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.13	chr6	-	2820	13	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	62	-9	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	141.713595168408	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAATATGCTCCTGT	NA	False	NA	-27	True	AATAAA	-11	NA	86710303	86668758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694500_86694973_86695087_86698322_86698421_86699550_86699648_86709892
ES.28943.14	chr6	-	2835	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	9	105	9	-105	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAAGTGTTTTTGTG	NA	False	NA	-123	True	NA	NA	NA	86710356	86668854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.15	chr6	-	2503	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	-9	455	-9	-455	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCATGGTCTTGTCTGG	NA	False	NA	0	True	NA	NA	NA	86710374	86669204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.16	chr6	-	2254	12	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	16	-491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	110.735855765267	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAGTTTGATTCTGAG	NA	False	NA	-36	True	AATAAA	-12	NA	86710349	86669240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86695010_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.17	chr6	-	2196	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	-1	754	-1	-754	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTCCTTTCATTTGT	NA	False	NA	NA	False	CATAAA	-23	NA	86710366	86669503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.18	chr6	-	1722	13	ISM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	78	5546	-65	-5546	5prime_fragment	FALSE	canonical	3	303	junction_6	36.7955122565541	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTTGTTGAAAATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	86710287	86674295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.19	chr6	-	297	1	FSM	ENSMUSG00000001157.14	ENSMUST00000203741.2	2750	1	1746	707	1746	-623	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCGGAATACTATTAA	NA	False	NA	NA	False	ACTAAA	-19	NA	86692129	86691832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86691800_86692100
ES.28943.2	chr6	-	3017	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	-26	-42	-26	42	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTAGTTTTGGGGT	NA	False	NA	24	True	AAAAAG	-13	NA	86710391	86668707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.20	chr6	-	179	1	FSM	ENSMUSG00000001157.14	ENSMUST00000203741.2	2750	1	1745	826	1745	-742	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCTTCATTGCAT	NA	False	NA	NA	False	NA	NA	NA	86692130	86691951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86692000_86692100
ES.28943.21	chr6	-	1382	1	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	35	-11757	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86710330	86708948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86708900_86710300
ES.28943.3	chr6	-	3014	14	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	42	41	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	102.041585675158	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTTTTAGTTTTGGGG	NA	False	NA	23	True	AAAAAG	-12	NA	86710323	86668708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694500_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.4	chr6	-	2816	13	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	109.362896155669	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710327	86668749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674519_86677493_86677621_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.5	chr6	-	2795	13	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	109.071459756131	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710335	86668749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86709892
ES.28943.6	chr6	-	2895	14	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.609473754704	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710325	86668749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681494_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.7	chr6	-	2451	9	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	38	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	125.437173019006	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTCCTGTTTAAAGTG	NA	False	NA	-19	True	AATAAA	-19	NA	86710327	86668750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86703054_86703179_86709892
ES.28943.8	chr6	-	5952	13	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	31	-8	intron_retention	FALSE	canonical	3	303	junction_6	39.7345357759888	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATATGCTCCTGTT	NA	False	NA	-26	True	AATAAA	-12	NA	86710334	86668757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28943.9	chr6	-	2807	14	NNC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	64	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.726508854479	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATATGCTCCTGTT	NA	False	NA	-26	True	AATAAA	-12	NA	86710301	86668757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86670034_86674430_86674521_86677565_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ES.28944.1	chr6	+	3435	1	Genic_Genomic	ENSMUSG00000107961.2	novel	NA	NA	NA	NA	786	644	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATCAG	NA	False	NA	NA	False	AATGAA	-4	NA	86711256	86714691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_86711300_86714700
ES.28945.1	chr6	+	341	1	Intergenic	novelGene_24041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	86723909	86724250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86723900_86724200
ES.28946.1	chr6	+	204	1	Intergenic	novelGene_24042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGGTAGCGGAAGCTTC	NA	False	NA	NA	False	AAAAAG	-8	NA	86760506	86760710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86760500_86760700
ES.28946.10	chr6	+	3868	18	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-36	283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.5276109037731	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGGAGCAGAGACGAGC	NA	False	NA	NA	False	NA	NA	NA	86826462	86973939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942613_86944250_86944356_86959523_86959626_86972821
ES.28946.11	chr6	+	10038	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-29	6	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGTTTTTTCTTA	NA	False	NA	11	True	ATTAAA	-21	NA	86826469	86980211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.12	chr6	+	5284	16	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-23	682	intron_retention	FALSE	canonical	2	14	junction_15	7.89824171713061	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTTGTCCTTGCAAAT	NA	False	NA	19	True	AGTAAA	-20	NA	86826475	86975286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.13	chr6	+	5103	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-22	679	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCAGTTGTCCTTGCA	NA	False	NA	16	True	AGTAAA	-17	NA	86826476	86975283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.14	chr6	+	10207	16	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-21	3	intron_retention	FALSE	canonical	2	13	junction_12	8.25159917160843	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTTGTGTGTTTTTTC	NA	False	NA	8	True	ATTAAA	-18	NA	86826477	86980208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.16	chr6	+	5201	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-18	679	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.86903865001209	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCAGTTGTCCTTGCA	NA	False	NA	16	True	AGTAAA	-17	NA	86826480	86975283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
ES.28946.18	chr6	+	10111	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.64347135591679	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTAGTTGTGTGTTTTT	NA	False	NA	6	True	ATTAAA	-16	NA	86826490	86980206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
ES.28946.2	chr6	+	171	2	Intergenic	novelGene_24043	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAACTGAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	86760507	86855888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86760632_86855841
ES.28946.20	chr6	+	6003	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-8	1596	combination_of_known_junctions	FALSE	canonical	2	14	junction_16	7.67885692990825	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTCTTTCTCACAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	86826490	86976200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.21	chr6	+	5280	19	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	3	677	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	12.1151878969242	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGTCAGTTGTCCTTG	NA	False	NA	14	True	AGTAAA	-15	NA	86826501	86975281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86958277_86958380_86959523_86959626_86972821
ES.28946.22	chr6	+	3283	17	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	4	792	intron_retention	FALSE	canonical	0	0	junction_16	11.2303648093016	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTATGATGCTGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	86826502	86965812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86965426
ES.28946.23	chr6	+	5700	18	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	10.6994162761582	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTCAGATGTGTAA	NA	False	NA	NA	False	AATAAA	-23	NA	86826505	86968846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86965857
ES.28946.25	chr6	+	6117	18	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	11.5465059350419	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTCAGATGTGTAA	NA	False	NA	NA	False	AATAAA	-23	NA	86826513	86968846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86947972_86948069_86965426
ES.28946.27	chr6	+	4803	16	NIC	ENSMUSG00000057230.15	novel	7203	20	NA	NA	19	678	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	9.90263713473448	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTCAGTTGTCCTTGC	NA	False	NA	15	True	AGTAAA	-16	NA	86826532	86975282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.28	chr6	+	3470	18	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	43	1216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	10.6994162761582	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCATATTTGTTTTTT	NA	False	NA	NA	False	AATGAA	-42	NA	86826556	86966236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86965426
ES.28946.29	chr6	+	6696	17	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	106	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	10.3589861352354	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAGAGACTTAGTTGT	NA	False	NA	-2	True	ATTAAA	-8	NA	86827140	86980198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821_86976290_86979124
ES.28946.3	chr6	+	163	1	Intergenic	novelGene_24044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTATTATTTTATAAT	NA	False	NA	NA	False	NA	NA	NA	86808483	86808646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86808500_86808600
ES.28946.30	chr6	+	4176	16	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-34101	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	10.5758635055909	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTTGTGTGTTTTTTC	NA	False	NA	8	True	ATTAAA	-18	NA	86901993	86980208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86972821_86973928_86979237
ES.28946.31	chr6	+	4402	14	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-12251	672	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.0415597831495	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTTGGTCAGTTGT	NA	False	NA	9	True	AGTAAA	-10	NA	86923843	86975276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86958277_86958380_86959523_86959626_86960793_86960905_86963245_86963357_86972821
ES.28946.32	chr6	+	3069	7	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-68	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	13.0128141972954	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGTTGTGTGTTTTTTC	NA	False	NA	8	True	ATTAAA	-18	NA	86936026	86980208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821_86973974_86979119
ES.28946.33	chr6	+	5485	7	NNC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	30	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.0524809988209	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCATGATGTTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	86936124	86968838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86963251_86963357_86964185
ES.28946.34	chr6	+	4129	1	Intergenic	novelGene_24048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTTCATTTTGTGCCT	1643	False	NA	NA	False	NA	NA	NA	86948573	86952702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_86948600_86952700
ES.28946.35	chr6	+	1248	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-38	18	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTATGCCACCCTGA	NA	False	NA	43	True	TATAAA	-21	NA	86986179	87005461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.36	chr6	+	6433	6	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	-37	0	intron_retention	FALSE	canonical	3	2373	junction_5	247.055459360849	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	False	NA	23	True	AATAAA	-29	NA	86986180	87005441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986942_86989888_86992684_86996346_86996414_86997700_87000171_87002467_87002643_87005276
ES.28946.37	chr6	+	3869	7	NIC	ENSMUSG00000029993.17	novel	948	8	NA	NA	-34	2	intron_retention	FALSE	canonical	3	2373	junction_6	268.711534714997	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986183	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_87000171_87002467_87002643_87005276
ES.28946.38	chr6	+	4141	7	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	-32	1	intron_retention	FALSE	canonical	3	2373	junction_6	227.491880196977	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGCTTCCTCTCACGA	NA	False	NA	24	True	AATAAA	-30	NA	86986185	87005442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986942_86989888_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.39	chr6	+	1675	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-32	-8	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_2	1173.35698292336	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	False	NA	10	True	AATAAA	-16	NA	86986185	87005428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986372_86986731_86987408_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.4	chr6	+	3826	25	Fusion	ENSMUSG00000057230.15_ENSMUSG00000029993.17	novel	19341	21	NA	NA	-216	-1	multi-exon	FALSE	canonical	0	0	junction_16	1130.65942841138	586	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTTGCTTCCTCTCAC	NA	False	NA	22	True	AATAAA	-28	NA	86826282	87005440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_86826439_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86980977_86981045_86983736_86984028_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ES.28946.40	chr6	+	1577	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	-630	3	-30	2	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986187	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.42	chr6	+	3760	8	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-15	2	intron_retention	FALSE	canonical	3	210	junction_1	897.999795463819	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986202	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986372_86986731_86986942_86989888_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.43	chr6	+	2179	7	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1028.32836303499	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986206	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986313_86991196_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.44	chr6	+	1312	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	935.045821069748	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986212	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986492_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.45	chr6	+	1745	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	2854	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	1183.53527619586	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCATCATTATCATTT	NA	False	NA	NA	False	NA	NA	NA	86986215	87008297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87007579
ES.28946.46	chr6	+	1114	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	944.005131077157	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	False	NA	10	True	AATAAA	-16	NA	86986215	87005428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986307_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.47	chr6	+	1141	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1222.39294009741	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986215	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986321_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ES.28946.48	chr6	+	1800	9	NNC	ENSMUSG00000029993.17	novel	948	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	9	junction_2	1172.10803016403	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACATTTGCTTCCTC	NA	False	NA	18	True	AATAAA	-24	NA	86986215	87005436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86989888_86989990_86990501_86990755_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.49	chr6	+	1310	4	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	872	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	1255.91250579896	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAATGATTTGGTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	86986215	86991344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986372_86986731_86986942_86989888_86989990_86990501
ES.28946.5	chr6	+	4758	16	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-68	108	intron_retention	FALSE	canonical	2	13	junction_12	8.25159917160843	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCGAATCACTCGTTTT	NA	False	NA	NA	False	NA	NA	NA	86826430	86974712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28946.50	chr6	+	1183	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1194.48413944054	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986215	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002634_87005273
ES.28946.51	chr6	+	1173	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1212.93769805996	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986215	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986353_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ES.28946.52	chr6	+	1188	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1225.14452591317	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	False	NA	10	True	AATAAA	-16	NA	86986219	87005428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986382_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ES.28946.53	chr6	+	3222	9	NNC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	1141.9857089189	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATAAATACATTTGCTT	NA	False	NA	14	True	AATAAA	-20	NA	86986222	87005432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986372_86986731_86986942_86989888_86989990_86990501_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.55	chr6	+	3524	7	ISM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	49	11	-4	-6	intron_retention	FALSE	canonical	3	2612	junction_3	213.806571461216	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATATAAATACATTTGC	NA	False	NA	12	True	AATAAA	-18	NA	86986866	87005430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467
ES.28946.56	chr6	+	3670	7	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	11	junction_1	1024.32927919796	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	False	NA	10	True	AATAAA	-16	NA	86986866	87005428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86987166_86989888_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.57	chr6	+	1292	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	50	-392	-3	390	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAACAGTAACAA	NA	False	NA	NA	False	NA	NA	NA	86986867	87005833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.58	chr6	+	1106	9	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_6	1218.85181625988	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986870	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87001891_87002104_87002467_87002643_87005276
ES.28946.59	chr6	+	891	8	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	966.856615163652	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGCTTCCTCTCACGA	NA	False	NA	24	True	AATAAA	-30	NA	86986870	87005442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997707_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.6	chr6	+	6632	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-68	2060	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.86903865001209	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTTTAATCATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	86826430	86976664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
ES.28946.60	chr6	+	7312	4	NNC	ENSMUSG00000029993.17	novel	655	2	NA	NA	1	-2556	intron_retention	FALSE	non_canonical	0	0	junction_2	1304.84771354958	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86986871	86997612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86989888_86994173_86994426_86994690_86994917
ES.28946.61	chr6	+	3004	9	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1314.16902808391	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAGAATGATATAAATACA	NA	False	NA	7	True	AATAAA	-13	NA	86986871	87005425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86987329_86987408_86989888_86989990_86990501_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.62	chr6	+	2536	1	FSM	ENSMUSG00000029993.17	ENSMUST00000205018.2	2508	1	10	-38	1	38	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGGGAGTGAGTACA	NA	False	NA	NA	False	NA	NA	NA	86986871	86989407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_86986900_86989400
ES.28946.63	chr6	+	3605	8	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	1	5010	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	992.217985430744	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAAATGGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	86986871	87010453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87007579
ES.28946.64	chr6	+	3709	7	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	1	-4	intron_retention	FALSE	canonical	2	8	junction_1	1025.41985980811	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATAAATACATTTGCTT	NA	False	NA	14	True	AATAAA	-20	NA	86986871	87005432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86987206_86989888_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.65	chr6	+	3189	7	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	2373	junction_6	273.049852997987	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86986872	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87002643_87005276
ES.28946.66	chr6	+	6090	6	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	1135.55758990903	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	False	NA	23	True	AATAAA	-29	NA	86986872	87005441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86986942_86989888_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467
ES.28946.68	chr6	+	1120	8	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	995.46051285476	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTCCTCTCACGAAT	NA	False	NA	26	True	AATAAA	-32	NA	86986874	87005444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86987166_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.69	chr6	+	3932	6	NIC	ENSMUSG00000029993.17	novel	950	8	NA	NA	2353	2	intron_retention	FALSE	canonical	3	2373	junction_5	247.265848834812	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86989337	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ES.28946.7	chr6	+	5414	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-55	678	intron_retention	FALSE	canonical	2	7	junction_15	9.9365172470036	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTCAGTTGTCCTTGC	NA	False	NA	15	True	AGTAAA	-16	NA	86826443	86975282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
ES.28946.70	chr6	+	467	4	NNC	ENSMUSG00000029993.17	novel	950	8	NA	NA	-4222	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1186.04843446163	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATTTGCTTCCTCTC	NA	False	NA	20	True	AATAAA	-26	NA	86997758	87005438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_86997822_87000109_87000171_87002461_87002643_87005276
ES.28946.8	chr6	+	5323	19	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-53	673	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	11.8535299737887	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGGTCAGTTGTC	NA	False	NA	10	True	AGTAAA	-11	NA	86826445	86975277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940977_86941208_86942458_86942617_86944250_86944356_86947972_86948069_86959523_86959626_86972821
ES.28946.9	chr6	+	6511	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	-49	2060	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTTTAATCATTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	86826449	86976664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
ES.28947.1	chr6	-	2006	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	-3	-1	-3	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4603	False	NA	-1	True	ATTAAA	-19	NA	86770569	86713821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.10	chr6	-	1194	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	24	784	4	30	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTATTATCGTCTAT	4630	False	NA	NA	False	ATTAAA	-29	NA	86770542	86714606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.11	chr6	-	1290	14	NIC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	1	23	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	62.060954957022	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGACTATGTTATTAT	4627	False	NA	NA	False	ATTAAA	-22	NA	86770545	86714613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86751930_86752031_86770490
ES.28947.12	chr6	-	2212	12	NIC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	5	16	intron_retention	FALSE	canonical	3	139	junction_5	18.4099326406891	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGGATGCAGACTATG	4631	False	NA	NA	False	ATTAAA	-15	NA	86770541	86714620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.13	chr6	-	2040	10	NNC	ENSMUSG00000029994.18	novel	2184	8	NA	NA	25	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	54.0064010838039	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTTGGTGCTTTGTGC	4651	False	NA	NA	False	CATAAA	-14	NA	86770521	86724452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86725609_86725680_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.2	chr6	-	1994	13	NNC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	48.8028915354636	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	4651	False	NA	-1	True	ATTAAA	-19	NA	86770521	86713821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725832_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.4	chr6	-	2052	13	NNC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	48.8028915354636	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTATTCTTTCTCTGA	4627	False	NA	-3	True	ATTAAA	-17	NA	86770545	86713823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725796_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.5	chr6	-	1885	12	NIC	ENSMUSG00000029994.18	novel	2002	13	NA	NA	0	-1	combination_of_known_splicesites	TRUE	canonical	1	3	junction_3	49.8704105782143	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTATTCTTTCTCTGA	4626	False	NA	-3	True	ATTAAA	-17	NA	86770546	86713823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_86714806_86718817_86718941_86720099_86720159_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28947.7	chr6	-	1462	7	NNC	ENSMUSG00000029994.18	novel	2623	13	NA	NA	-6430	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	65.2192882171797	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTGTGTATTCTTTC	9303	False	NA	-8	True	ATTAAA	-12	NA	86728469	86713828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86728413
ES.28947.8	chr6	-	1541	5	NNC	ENSMUSG00000029994.18	novel	2623	13	NA	NA	-3814	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	79.7131576341071	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTGTGTATTCTTTC	7478	False	NA	-8	True	ATTAAA	-12	NA	86725853	86713828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725567
ES.28947.9	chr6	-	1641	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	47	314	27	-308	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGCAGATCCCGTGT	4653	False	NA	NA	False	NA	NA	NA	86770519	86714136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ES.28948.1	chr6	-	1839	1	Intergenic	novelGene_24045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGATTGTTTACAA	NA	False	NA	NA	False	AATAAA	-11	NA	86822482	86820643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86820600_86822500
ES.28949.1	chr6	-	1024	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	8	10	8	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGTATAGGTTATTT	NA	False	NA	NA	False	AATACA	-14	NA	86826414	86825390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_86825400_86826400
ES.2895.1	chr10	-	3489	1	Intergenic	novelGene_2225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	61402627	61399138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61399100_61402600
ES.28950.1	chr6	-	5343	1	Antisense	novelGene_ENSMUSG00000108216.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	86844703	86839360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_86839400_86844700
ES.28951.1	chr6	-	178	1	Intergenic	novelGene_24046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCCA	NA	False	NA	NA	False	NA	NA	NA	86919597	86919419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86919400_86919600
ES.28952.1	chr6	-	159	1	Intergenic	novelGene_24047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	86948469	86948310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_86948300_86948500
ES.28953.1	chr6	-	2233	1	Antisense	novelGene_ENSMUSG00000107688.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGCAGGCGGATTTC	NA	False	NA	NA	False	NA	NA	NA	86954612	86952379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_86952400_86954600
ES.28954.1	chr6	-	181	1	Intergenic	novelGene_24049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAGAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	87012795	87012614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87012600_87012800
ES.28955.1	chr6	+	6199	19	NNC	ENSMUSG00000029992.15	novel	729	4	NA	NA	-4342	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4353696937471	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGACTTTTTCTTTTTT	5603	False	NA	16	True	AATAAA	-17	NA	87015485	87069181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87015605_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.10	chr6	+	6123	18	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.1143665567592	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGCTGTGTGACTTTTT	9947	False	NA	9	True	AATAAA	-10	NA	87019829	87069174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.11	chr6	+	6014	17	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	0	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	32.165040708042	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGACTTTTTCTTT	9949	False	NA	13	True	AATAAA	-14	NA	87019831	87069178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.12	chr6	+	6207	19	NNC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.6803512140471	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGACTTTTTCTTTTTT	9950	False	NA	16	True	AATAAA	-17	NA	87019832	87069181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87019988_87027902_87028011_87030732_87030813_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.14	chr6	+	4261	19	Fusion	ENSMUSG00000090891.4_ENSMUSG00000029992.15	novel	6238	19	NA	NA	10	0	multi-exon	FALSE	canonical	1	1	junction_18	30.5828665823703	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGAGTGTTTCACCT	9959	False	NA	NA	False	AATAAA	-17	NA	87019841	87089979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87087858
ES.28955.15	chr6	+	6896	19	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	10	junction_3	35.5654934028428	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGACTTTTTCTTT	9980	False	NA	13	True	AATAAA	-14	NA	87019862	87069178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298
ES.28955.16	chr6	+	6233	20	NNC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.8746479141443	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9981	False	NA	14	True	AATAAA	-15	NA	87019863	87069179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030813_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.17	chr6	+	11996	15	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	11	50	intron_retention	FALSE	canonical	3	65	junction_12	18.6898695685603	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATGATTTTTGTGCAA	10001	False	NA	NA	False	AGTAAA	-35	NA	87019883	87065274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298
ES.28955.18	chr6	+	179	1	Intergenic	novelGene_24050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	87036810	87036989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_87036800_87037000
ES.28955.19	chr6	+	4415	3	ISM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	43457	0	9495	0	3prime_fragment	FALSE	canonical	3	104	junction_2	8	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	87063284	87069179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_87063454_87064298_87064461_87065095
ES.28955.2	chr6	+	6302	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	-62	-2	-62	2	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGACTTTTTCTTTTTT	9883	False	NA	16	True	AATAAA	-17	NA	87019765	87069181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.3	chr6	+	2405	20	NIC	ENSMUSG00000029992.15	novel	2286	20	NA	NA	-32	31	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	34.6378173872402	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATAATTATTCCACTCA	9913	False	NA	NA	False	AGTAAA	-16	NA	87019795	87065255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.4	chr6	+	6313	20	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	34.6378173872402	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9929	False	NA	14	True	AATAAA	-15	NA	87019811	87069179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.5	chr6	+	2348	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	-12	3902	-12	53	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTTTTGTGCAATTG	9933	False	NA	NA	False	AGTAAA	-38	NA	87019815	87065277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.6	chr6	+	2835	1	FSM	ENSMUSG00000029992.15	ENSMUST00000204872.2	2809	1	-4	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCACACTGGATATGAA	9945	False	NA	NA	False	NA	NA	NA	87019827	87022662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87019800_87022700
ES.28955.7	chr6	+	2639	21	NNC	ENSMUSG00000029992.15	novel	2286	20	NA	NA	2	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	47.1824914560476	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCACTCAACTAATGAT	9947	False	NA	NA	False	AGTAAA	-25	NA	87019829	87065264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87019988_87027023_87027195_87027902_87028011_87030183_87030243_87030732_87030929_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.8	chr6	+	6084	18	NNC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	43.3751639108218	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9947	False	NA	14	True	AATAAA	-15	NA	87019829	87069179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87054056_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28955.9	chr6	+	6408	20	NNC	ENSMUSG00000029992.15	novel	2286	20	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	36.0559737213853	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGACTTTTTCTTTTT	9947	False	NA	15	True	AATAAA	-16	NA	87019829	87069180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87019988_87027023_87027195_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ES.28956.1	chr6	-	178	1	Intergenic	novelGene_24051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTTTTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	87090445	87090267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87090300_87090400
ES.28957.1	chr6	-	1797	1	Intergenic	novelGene_24052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAAAACTATGGGGCCA	NA	False	NA	NA	False	NA	NA	NA	87096905	87095108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87095100_87096900
ES.28958.1	chr6	-	5023	18	FSM	ENSMUSG00000033420.13	ENSMUST00000042025.12	5253	18	230	0	190	0	multi-exon	TRUE	canonical	0	0	junction_2	1.45283400414453	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTTACTTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	87312516	87110834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87114338_87157091_87157173_87165088_87165257_87165717_87165814_87181390_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304_87289377_87312278
ES.28958.2	chr6	-	174	1	Intergenic	novelGene_24053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAGGAGA	1963	False	NA	NA	False	NA	NA	NA	87134547	87134373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87134400_87134500
ES.28958.3	chr6	-	538	3	NNC	ENSMUSG00000033420.13	novel	4725	17	NA	NA	75054	-9252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGGGTCTCTTGTCATC	8596	False	NA	NA	False	NA	NA	NA	87172171	87164933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87165257_87165717_87165814_87172052
ES.28958.4	chr6	-	2685	1	Intergenic	novelGene_24054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATTATCCATAAGTTCT	7952	False	NA	NA	False	NA	NA	NA	87174707	87172022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87172000_87174700
ES.28958.5	chr6	-	9732	1	NIC	ENSMUSG00000033420.13	novel	5253	18	NA	NA	15200	-2934	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAGTAGAGGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	87270170	87260438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87260400_87270200
ES.28959.1	chr6	-	4615	1	Intergenic	novelGene_24055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTCCATTTTATTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	87420221	87415606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87415600_87420200
ES.2896.1	chr10	-	177	1	Antisense	novelGene_ENSMUSG00000112255.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGAGAGAGAGAAAGAG	7395	False	NA	NA	False	NA	NA	NA	61409308	61409131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61409100_61409300
ES.28960.1	chr6	-	2797	11	FSM	ENSMUSG00000030047.15	ENSMUST00000113637.9	3671	11	-1	875	-1	-15	multi-exon	FALSE	canonical	0	0	junction_4	1.1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAAACAGAAAAC	7171	False	NA	NA	False	NA	NA	NA	87510218	87436401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87437116_87439912_87440446_87442482_87442680_87443454_87443577_87444894_87444969_87447494_87447628_87453124_87453333_87465173_87465291_87469159_87469248_87472894_87473095_87509807
ES.28961.1	chr6	-	5314	1	Genic_Genomic	ENSMUSG00000049409.10	novel	NA	NA	NA	NA	9603	2788	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTCTTAGTGTTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	87558098	87552784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_87552800_87558100
ES.28962.1	chr6	-	208	1	Intergenic	novelGene_24056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACCTGCATCATAAAAT	3208	False	NA	NA	False	NA	NA	NA	87576723	87576515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87576500_87576700
ES.28963.1	chr6	+	177	1	Intergenic	novelGene_24057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	87646566	87646743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_87646600_87646700
ES.28964.1	chr6	-	2747	12	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-2	2	intron_retention	TRUE	non_canonical	0	0	junction_1	24.981315331713	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGCTTATTTGCAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	87649131	87605403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606214_87606324_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.11	chr6	-	1776	11	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	14	2	intron_retention	FALSE	canonical	1	3	junction_10	20.4511613362176	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGATCTTCTGCCC	NA	False	NA	-10	True	AATAAA	-17	NA	87649161	87606728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841_87648914_87649108
ES.28964.12	chr6	-	2644	7	ISM	ENSMUSG00000030051.11	ENSMUST00000032130.8	1889	11	34	14970	-12	6372	5prime_fragment	FALSE	canonical	3	48	junction_1	11.5998084275369	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGATGTTAGTTTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	87649141	87621700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.13	chr6	-	3534	5	NIC	ENSMUSG00000030051.11	novel	3588	6	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	30.8413277924281	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGTCTCTTATTTGA	NA	False	NA	NA	False	CATAAA	-19	NA	87649178	87628070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87630875_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.14	chr6	-	3487	6	ISM	ENSMUSG00000030051.11	ENSMUST00000065997.5	3132	10	-1	22667	-1	0	5prime_fragment	FALSE	canonical	3	8	junction_5	25.5452539623312	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTCTCTTATTT	NA	False	NA	NA	False	CATAAA	-17	NA	87649130	87628072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648971
ES.28964.15	chr6	-	3664	6	ISM	ENSMUSG00000030051.11	ENSMUST00000032130.8	1889	11	-2	21342	-2	0	5prime_fragment	FALSE	canonical	3	57	junction_1	10.2489023802552	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTCTCTTATTT	NA	False	NA	NA	False	CATAAA	-17	NA	87649177	87628072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.16	chr6	-	1051	7	NNC	ENSMUSG00000030051.11	novel	3588	6	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.390284291345	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTCTCTTATTT	NA	False	NA	NA	False	CATAAA	-17	NA	87649063	87628072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87628272_87628363_87628416_87630689_87630875_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.17	chr6	-	1090	7	NNC	ENSMUSG00000030051.11	novel	3588	6	NA	NA	-15	-2126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.455413224686	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATGTTTTTATTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	87649144	87630198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87630275_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.2	chr6	-	3468	9	NNC	ENSMUSG00000030051.11	novel	3132	10	NA	NA	11812	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	25.4054620111503	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGCTTATTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	87637234	87605406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606199_87606310_87607154_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822
ES.28964.3	chr6	-	2756	12	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-16	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	24.981315331713	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTGTGGCTTATTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	87649145	87605407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606199_87606310_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.4	chr6	-	2520	12	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	27.3972912939935	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTGTGGCTTATTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	87649176	87605407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606199_87606310_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87649108
ES.28964.5	chr6	-	3075	11	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	3	junction_10	20.4511613362176	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTGTGGCTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	87649141	87605409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841_87648914_87649108
ES.28964.6	chr6	-	3284	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	20	-4	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTGTGGCTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	87649155	87605409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.7	chr6	-	2733	12	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	5	-5	intron_retention	TRUE	non_canonical	0	0	junction_1	24.981315331713	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTTGCTGTGGCTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	87649124	87605410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606220_87606330_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ES.28964.8	chr6	-	3129	10	FSM	ENSMUSG00000030051.11	ENSMUST00000065997.5	3132	10	-4	7	-4	-7	multi-exon	FALSE	canonical	3	8	junction_9	19.726525352153	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTTGCTGTGGCTTA	NA	False	NA	NA	False	AATAAA	-11	NA	87649133	87605412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648971
ES.28964.9	chr6	-	2491	13	NNC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	-3	-105	intron_retention	FALSE	non_canonical	0	0	junction_1	26.775169882229	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCACATGCTTTCTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	87649178	87605510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87605575_87605982_87606199_87606310_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841_87648914_87649108
ES.28965.1	chr6	-	3549	16	NIC	ENSMUSG00000089997.3	novel	3678	16	NA	NA	41	-2	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	8.63069457743054	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAACTGTTCTGTGTGTCT	NA	False	NA	NA	False	AATACA	-15	NA	87699742	87652576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87652879_87656808_87656966_87657132_87657254_87658085_87658251_87667529_87667828_87671707_87671903_87675036_87675942_87677280_87677466_87684223_87684377_87689127_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
ES.28965.2	chr6	-	3634	16	FSM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	41	3	41	-3	multi-exon	FALSE	canonical	1	1	junction_1	8.63069457743054	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAACTGTTCTGTGTGTC	NA	False	NA	NA	False	AATACA	-14	NA	87699742	87652577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87652879_87656808_87656966_87657046_87657254_87658085_87658251_87667529_87667828_87671707_87671903_87675036_87675942_87677280_87677466_87684223_87684377_87689127_87689250_87690283_87690357_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
ES.28965.3	chr6	-	1186	7	NNC	ENSMUSG00000089997.3	novel	3678	16	NA	NA	48	-36431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.80183061767393	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCCATCGACCCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	87699735	87689005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87689250_87690283_87690360_87691104_87691249_87694858_87695064_87695769_87695958_87698819_87699089_87699675
ES.28965.4	chr6	-	3310	3	ISM	ENSMUSG00000089997.3	ENSMUST00000238521.2	3678	16	5684	36433	5684	-36433	internal_fragment	FALSE	canonical	3	14	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTTGTCCATCGACCC	NA	False	NA	NA	False	ATTAAA	-16	NA	87694099	87689007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87689250_87690283_87690357_87691104
ES.28966.1	chr6	+	5662	7	NIC	ENSMUSG00000068263.12	novel	2729	8	NA	NA	-131	1777	intron_retention	FALSE	canonical	0	0	junction_1	0.372677996249965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTGTGAGTGAAATGC	NA	False	NA	NA	False	AATAAA	-16	NA	87707719	87734667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87708523_87709655_87709919_87726113_87726260_87727602_87728888_87730029_87730168_87730722_87730787_87731704
ES.28966.2	chr6	+	4517	8	FSM	ENSMUSG00000068263.12	ENSMUST00000032132.9	2729	8	-13	-1775	11	1775	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTCTGTGAGTGAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	87707861	87734665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727602_87727745_87728745_87728888_87730029_87730168_87730722_87730787_87731704
ES.28967.1	chr6	-	431	1	FSM	ENSMUSG00000068262.5	ENSMUST00000089501.5	1209	1	883	-105	883	105	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGCAAGCAAGCAAGC	2983	False	NA	NA	False	NA	NA	NA	87742303	87741872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87741900_87742300
ES.28968.1	chr6	+	251	1	Intergenic	novelGene_24058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAGAAAAAAGATTTTAC	3290	False	NA	NA	False	NA	NA	NA	87745622	87745873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_87745600_87745900
ES.28969.1	chr6	+	4191	1	Antisense	novelGene_ENSMUSG00000108064.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTCTATGTATTTCAC	NA	False	NA	NA	False	AATAAA	-17	NA	87774789	87778980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_87774800_87779000
ES.2897.1	chr10	+	1169	3	ISM	ENSMUSG00000020090.8	ENSMUST00000020287.8	3479	4	18674	2093	18674	-2093	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGAGATGCCTCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	61449944	61462251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61450050_61459070_61459171_61461287
ES.2897.2	chr10	+	3117	1	NIC	ENSMUSG00000020090.8	novel	3479	4	NA	NA	29957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	61461227	61464344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61461200_61464300
ES.28970.1	chr6	+	177	1	Intergenic	novelGene_24059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAATAAAAAAAAAAAAAAA	1272	False	NA	NA	False	NA	NA	NA	87812246	87812423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_87812200_87812400
ES.28971.1	chr6	-	4547	4	NNC	ENSMUSG00000030055.17	novel	4605	3	NA	NA	-41	5	intron_retention	TRUE	canonical	0	0	junction_1	18.4028983224563	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAAGCATGGTCTATCA	2653	False	NA	0	True	ATTAAA	-20	NA	87788802	87765841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87768671_87768762_87769823_87771595_87771780_87788328
ES.28971.10	chr6	-	1461	11	NNC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-6	3058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.0302726864692	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGTGCCTAGAGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	87815688	87795431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799429_87802439_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.11	chr6	-	1555	10	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-2	3058	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	90.9278645037366	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGTGCCTAGAGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	87815722	87795431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.12	chr6	-	6561	9	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	0	3058	intron_retention	FALSE	canonical	3	257	junction_8	22.5579115833004	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCTGTGCCTAGAGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	87815682	87795431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.13	chr6	-	7397	9	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-2	3056	intron_retention	FALSE	canonical	3	216	junction_4	32.2877685819259	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATCTGTGCCTAGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	87815722	87795433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ES.28971.14	chr6	-	3647	10	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	4	3056	intron_retention	FALSE	canonical	3	257	junction_9	22.3755819291179	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATCTGTGCCTAGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	87815678	87795433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.16	chr6	-	1395	7	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	2	3047	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	143.355812190817	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGAAAGGAAACATCTG	NA	False	NA	NA	False	ATTAAA	-8	NA	87815718	87795442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802467_87804565_87804679_87815625
ES.28971.18	chr6	-	1490	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	-80	4427	-80	2812	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTAAATTTAGAGACACA	NA	False	NA	-1	True	AATACA	-19	NA	87815860	87795677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.19	chr6	-	5915	4	ISM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	11176	4512	-5068	2727	intron_retention	FALSE	canonical	3	303	junction_3	9.0921211313239	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCCTATACTCTGCTT	7222	False	NA	-9	True	NA	NA	NA	87804604	87795762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321
ES.28971.2	chr6	-	4709	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	-116	12	-116	0	multi-exon	FALSE	canonical	3	38	junction_1	1	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTCAAGCATGGTC	2578	False	NA	-5	True	ATTAAA	-15	NA	87788877	87765846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87769823_87771595_87771780_87788328
ES.28971.3	chr6	-	4569	4	NNC	ENSMUSG00000030055.17	novel	4605	3	NA	NA	-68	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	18.4028983224563	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	2626	False	NA	-6	True	ATTAAA	-14	NA	87788829	87765847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87768649_87768739_87769823_87771595_87771780_87788328
ES.28971.4	chr6	-	4553	4	NNC	ENSMUSG00000030055.17	novel	4605	3	NA	NA	-53	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	18.4028983224563	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	2641	False	NA	-6	True	ATTAAA	-14	NA	87788814	87765847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87768710_87768801_87769823_87771595_87771780_87788328
ES.28971.5	chr6	-	5280	13	Fusion	ENSMUSG00000030055.17_ENSMUSG00000030056.9	novel	5837	11	NA	NA	-74	-1	intron_retention	FALSE	canonical	2	4	junction_2	101.18053172424	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	NA	False	NA	-6	True	ATTAAA	-14	NA	87815854	87765847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_87769823_87771595_87771780_87796040_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.6	chr6	-	3879	12	Fusion	ENSMUSG00000030055.17_ENSMUSG00000030056.9	novel	5837	11	NA	NA	34	-4	intron_retention	FALSE	canonical	2	4	junction_2	105.452272702782	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTGCCGAGCCTTGT	NA	False	NA	0	True	TATAAA	-22	NA	87815648	87769137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_87769823_87771595_87771780_87796040_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.7	chr6	-	4073	1	ISM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	20455	2	4211	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGCAGATTTGTCAAGG	NA	False	NA	NA	False	AATACA	-15	NA	87795325	87791252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87791300_87795300
ES.28971.8	chr6	-	1739	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	-69	4167	-69	3072	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTGTTCTGTGGTGCA	NA	False	NA	NA	False	ATTAAA	-33	NA	87815849	87795417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28971.9	chr6	-	4540	10	NIC	ENSMUSG00000030056.9	novel	5837	11	NA	NA	-15	3061	intron_retention	FALSE	canonical	3	216	junction_4	31.7762237382249	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCCTAGAGCTTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	87815753	87795428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ES.28972.1	chr6	+	5486	1	Antisense	novelGene_ENSMUSG00000030057.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGGGGGTGAGGGA	NA	False	NA	NA	False	ATTAAA	-9	NA	87821725	87827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_87821700_87827200
ES.28973.1	chr6	-	3338	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	58	-1221	11	1221	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATGTTTTACTTT	NA	False	NA	NA	False	AATAGA	-20	NA	87828030	87818375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.15	chr6	-	1610	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	625	junction_4	4057.45729336736	2990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828002	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822764_87827885
ES.28973.16	chr6	-	6787	4	ISM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	31	467	5	0	intron_retention	FALSE	canonical	3	7593	junction_2	1836.59364646136	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828057	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637
ES.28973.17	chr6	-	3693	4	NIC	ENSMUSG00000030057.16	novel	952	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	59	junction_3	4928.06107916694	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828040	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87821139_87822103_87822540_87822637_87822776_87825996
ES.28973.18	chr6	-	1644	5	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5047.4819650495	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828039	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822309_87822446_87822540_87822658_87822776_87827885
ES.28973.19	chr6	-	1791	4	FSM	ENSMUSG00000030057.16	ENSMUST00000204596.2	911	4	-23	-857	14	0	multi-exon	FALSE	canonical	3	8336	junction_2	1451.03694722851	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828027	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822540_87822637_87822776_87827885
ES.28973.2	chr6	-	8465	1	Genic_Genomic	ENSMUSG00000030057.16	novel	NA	NA	NA	NA	12	32	mono-exon	FALSE	NA	NA	NA	NA	NA	2990	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGGTAAGGAGACTG	NA	False	NA	NA	False	AGTAAA	-44	NA	87828029	87819564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_87819600_87828000
ES.28973.22	chr6	-	1715	5	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	30	junction_2	4617.98491633526	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828062	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822303_87822413_87822540_87822637_87822776_87827885
ES.28973.23	chr6	-	1892	3	FSM	ENSMUSG00000030057.16	ENSMUST00000134851.3	985	3	11	-918	11	0	multi-exon	FALSE	canonical	3	10734	junction_2	536.5	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828030	87820063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822776_87827885
ES.28973.24	chr6	-	1631	5	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	5020.87238435713	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGACAGTTTGGACT	NA	False	NA	-10	True	ATTAAA	-20	NA	87828001	87820064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822335_87822446_87822540_87822658_87822776_87827885
ES.28973.25	chr6	-	1708	5	NNC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	4595.07249670775	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGACAGTTTGGACT	NA	False	NA	-10	True	ATTAAA	-20	NA	87828057	87820064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822335_87822446_87822540_87822637_87822776_87827885
ES.28973.28	chr6	-	1729	6	FSM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	27	-804	-3	-1	multi-exon	FALSE	canonical	3	59	junction_4	4719.63282470151	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGACAGTTTGGACT	NA	False	NA	-10	True	ATTAAA	-20	NA	87828015	87820064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87825996_87826092_87827885
ES.28973.29	chr6	-	6882	3	ISM	ENSMUSG00000030057.16	ENSMUST00000141961.4	915	4	-21	-836	11	-1	intron_retention	FALSE	canonical	3	2802	junction_2	4502.5	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGACAGTTTGGACT	NA	False	NA	-10	True	ATTAAA	-20	NA	87828030	87820064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103_87822540_87822658
ES.28973.3	chr6	-	2071	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	104	0	20	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	87827984	87819596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.30	chr6	-	1636	5	NNC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4641.85498346297	2990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGATGACAGTTTGGAC	NA	False	NA	-11	True	ATTAAA	-19	NA	87828029	87820065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822117_87822306_87822446_87822540_87822637_87822776_87827885
ES.28973.31	chr6	-	6922	3	ISM	ENSMUSG00000030057.16	ENSMUST00000204596.2	911	4	-46	-855	-8	-2	intron_retention	FALSE	canonical	3	8336	junction_2	1735.5	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGATGACAGTTTGGAC	NA	False	NA	-11	True	ATTAAA	-19	NA	87828050	87820065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103_87822540_87822637
ES.28973.36	chr6	-	1510	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	25	-82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4019.71419226542	2990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCCTTTTGTTTGTTT	NA	False	NA	-28	True	AATAAA	-28	NA	87827979	87820145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821132_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.37	chr6	-	1718	4	FSM	ENSMUSG00000030057.16	ENSMUST00000141961.4	915	4	-48	-755	5	-82	multi-exon	FALSE	canonical	3	2802	junction_2	4016.05082415826	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCCTTTTGTTTGTTT	NA	False	NA	-28	True	AATAAA	-28	NA	87828057	87820145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822540_87822658_87822776_87827885
ES.28973.4	chr6	-	1925	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	31	219	5	-219	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGCCTTGGATTGTC	NA	False	NA	NA	False	NA	NA	NA	87828057	87819815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.40	chr6	-	1600	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	-31	92	-5	-92	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87828093	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ES.28973.41	chr6	-	1605	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	14	559	-12	-92	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87828074	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
ES.28973.43	chr6	-	1916	6	NNC	ENSMUSG00000030057.16	novel	952	6	NA	NA	216	-92	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5045.26441725307	2988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87827788	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87825996_87826092_87827383
ES.28973.44	chr6	-	1530	1	NIC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	1614	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	2988	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	4833	False	NA	-38	True	AATAAA	-18	NA	87821685	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87820200_87821700
ES.28973.46	chr6	-	1775	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	259	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4307.73635451382	2988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87827745	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827383
ES.28973.49	chr6	-	6659	4	ISM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	20	92	0	-92	intron_retention	FALSE	canonical	3	2802	junction_3	3678.79059233088	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87828042	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658
ES.28973.50	chr6	-	1513	5	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	-8	-92	at_least_one_novel_splicesite	FALSE	canonical	3	855	junction_1	3893.28171341351	2989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGACTAAAGTTCCTT	NA	False	NA	-38	True	AATAAA	-18	NA	87828020	87820155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822117_87822303_87822446_87822540_87822658_87822776_87827885
ES.28973.51	chr6	-	1413	6	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	6	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4542.52878471893	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGACTAAAGTTCCT	NA	False	NA	-39	True	AATAAA	-17	NA	87827998	87820156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87820423_87820513_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ES.28973.54	chr6	-	1627	6	NIC	ENSMUSG00000030057.16	novel	952	6	NA	NA	14	-94	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	4588.50247466426	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTTGACTAAAGTTCC	NA	False	NA	-40	True	AATAAA	-16	NA	87828027	87820157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87825996_87826092_87827885
ES.28973.57	chr6	-	1550	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	11	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4616.90277675413	2989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTTGACTAAAGTTCC	NA	False	NA	-40	True	AATAAA	-16	NA	87828030	87820157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822643_87822776_87827885
ES.28973.58	chr6	-	1525	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	1	-94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4630.48644177909	2989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTTGACTAAAGTTCC	NA	False	NA	-40	True	AATAAA	-16	NA	87828003	87820157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822299_87822446_87822540_87822637_87822776_87827885
ES.28973.6	chr6	-	1673	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	-3	-9	-3	9	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGACTTTTCTTTCTA	NA	False	NA	0	True	ATTAAA	-30	NA	87828065	87820054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ES.28973.63	chr6	-	1543	5	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	14	-98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4616.90277675413	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGAGTTTTGACTAAAG	NA	False	NA	-44	True	AATAAA	-12	NA	87828027	87820161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821139_87822103_87822303_87822446_87822532_87822635_87822776_87827885
ES.28973.64	chr6	-	1479	5	NNC	ENSMUSG00000030057.16	novel	1661	5	NA	NA	6	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2980.57788021048	2989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGGAGTTTTGACTAA	NA	False	NA	-46	True	AATAAA	-10	NA	87827998	87820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87821129_87822099_87822303_87822446_87822540_87822658_87822764_87827885
ES.28973.67	chr6	-	1687	4	FSM	ENSMUSG00000030057.16	ENSMUST00000204596.2	911	4	-34	-742	3	-115	multi-exon	FALSE	canonical	3	8336	junction_2	1451.03694722851	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCTGGAGGAGGAAG	NA	False	NA	-61	True	AATAGA	-23	NA	87828038	87820178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822540_87822637_87822776_87827885
ES.28973.68	chr6	-	1320	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	59	799	12	-332	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCCAGAGTAAACATC	NA	False	NA	NA	False	ACTAAA	-3	NA	87828029	87820395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
ES.28973.69	chr6	-	1092	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	95	988	11	284	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	2964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTGCATCAGGCCCTC	NA	False	NA	NA	False	ATTAAA	-12	NA	87827993	87820584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.7	chr6	-	1749	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	-35	461	-35	6	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTGGACTTTTCTTT	NA	False	NA	-3	True	ATTAAA	-27	NA	87828123	87820057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ES.28973.70	chr6	-	893	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	85	1200	1	72	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	2945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACCCCCTTTCCGTGC	NA	False	NA	25	True	AAAAAG	-44	NA	87828003	87820796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
ES.28973.72	chr6	-	816	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	61	784	3	21	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	2944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTTATGTTTAGT	NA	False	NA	-26	True	NA	NA	NA	87828001	87820847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ES.28973.8	chr6	-	7032	2	ISM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	5	-3	5	3	intron_retention	FALSE	canonical	3	11807	junction_1	0	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	-6	True	ATTAAA	-24	NA	87828057	87820060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103
ES.28973.9	chr6	-	6815	3	ISM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	28	-3	20	3	intron_retention	FALSE	canonical	3	7593	junction_2	2107	2990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACAGTTTGGACTTTTC	NA	False	NA	-6	True	ATTAAA	-24	NA	87827984	87820060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87821139_87822103_87822303_87822446
ES.28974.1	chr6	-	176	1	Intergenic	novelGene_24060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTACAAAAGA	9086	False	NA	NA	False	NA	NA	NA	87836614	87836438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87836400_87836600
ES.28975.1	chr6	-	255	1	Intergenic	novelGene_24061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGACAGTGTGTCCATC	3505	False	NA	NA	False	NA	NA	NA	87848042	87847787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87847800_87848000
ES.28976.1	chr6	-	182	1	Intergenic	novelGene_24062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAAGTTGCCTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	87858138	87857956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87858000_87858100
ES.28977.1	chr6	+	4133	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	11	-4	11	4	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCCTTTTGTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	87864806	87890581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.10	chr6	+	4817	21	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-20	9	intron_retention	FALSE	canonical	0	0	junction_2	211.770182037037	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAACCGTCTCATCC	NA	False	NA	10	True	AATAAA	-30	NA	87864889	87889521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87881174_87881797_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.11	chr6	+	3156	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-19	11	intron_retention	FALSE	canonical	0	0	junction_2	202.620482472418	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACCGTCTCATCCCT	NA	False	NA	12	True	AATAAA	-32	NA	87864890	87889523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.13	chr6	+	3750	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-14	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	250.60263094976	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	19	True	AATAAA	-39	NA	87864895	87889530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.15	chr6	+	4540	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_2	206.667116523539	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864897	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.19	chr6	+	4046	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_2	197.272983870801	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTATACTCAAAGAAA	NA	False	NA	-1	True	AATAAA	-19	NA	87864898	87889510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.2	chr6	+	3029	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	80	1031	-34	34	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTCAGCATGTATTTCT	NA	False	NA	35	True	AAGAAA	-17	NA	87864875	87889546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.20	chr6	+	3900	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	206.233471817645	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87864898	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.21	chr6	+	4513	23	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_2	300.341857563941	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864899	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884359_87884498_87884760_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.23	chr6	+	2872	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	109	1159	-5	-94	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCATCCTATCATTCAG	NA	False	NA	20	True	AATACA	-14	NA	87864904	87889418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.24	chr6	+	895	5	FSM	ENSMUSG00000030058.18	ENSMUST00000049966.6	921	5	-5	31	-5	-31	multi-exon	FALSE	canonical	0	0	junction_2	373.284408996679	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGAAATAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	87864904	87867710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171
ES.28977.25	chr6	+	2992	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	255.908212514789	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTATACTCAAAGAAA	NA	False	NA	-1	True	AATAAA	-19	NA	87864904	87889510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865083_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.26	chr6	+	2958	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	294.666188374045	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864904	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867251_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871150_87872672_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.3	chr6	+	4021	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.60263094976	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87864875	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870813_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.31	chr6	+	4041	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	254.241880573263	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864909	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869599_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.35	chr6	+	5101	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	197.272983870801	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864910	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.38	chr6	+	5588	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1	18	intron_retention	FALSE	non_canonical	0	0	junction_2	257.896417885702	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	19	True	AATAAA	-39	NA	87864910	87889530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87870261_87870579_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.39	chr6	+	4692	21	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_2	211.650153555342	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864910	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87873098_87874934_87875031_87879179_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.4	chr6	+	3020	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-33	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	254.241880573263	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACCGTCTCATCCCT	NA	False	NA	12	True	AATAAA	-32	NA	87864876	87889523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869599_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.40	chr6	+	4487	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	4	11	intron_retention	FALSE	canonical	0	0	junction_2	201.703740075217	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACCGTCTCATCCCT	NA	False	NA	12	True	AATAAA	-32	NA	87864913	87889523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.41	chr6	+	2861	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	259.823748270417	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864913	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.43	chr6	+	2922	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	4	18	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	197.076572985819	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	19	True	AATAAA	-39	NA	87864913	87889530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.44	chr6	+	5554	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	6	11	intron_retention	FALSE	canonical	0	0	junction_2	256.28378545044	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAACCGTCTCATCCCT	NA	False	NA	12	True	AATAAA	-32	NA	87864915	87889523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885609_87886645_87886785_87887021_87887121_87889153
ES.28977.48	chr6	+	4024	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	6	238	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	305.786714458344	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTCTCAGGTCAGTGC	NA	False	NA	NA	False	NA	NA	NA	87864915	87890815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.5	chr6	+	5525	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-33	0	intron_retention	FALSE	canonical	2	32	junction_1	200.613379142959	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864876	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.50	chr6	+	6449	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	259.732078947648	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87864920	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.51	chr6	+	5294	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	259.238716279302	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864922	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869321_87869614_87870936_87871022_87871157_87872675_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.52	chr6	+	5220	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1	18	intron_retention	FALSE	non_canonical	0	0	junction_7	299.897268880672	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	19	True	AATAAA	-39	NA	87864922	87889530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884760_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.57	chr6	+	5960	21	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	8	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	314.785240282959	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTAATATTTATACTCA	NA	False	NA	0	True	AATAAA	-13	NA	87864929	87889504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867254_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87872744_87872972_87873098_87874934_87875031_87879179_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.58	chr6	+	5836	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-7	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	260.214668051952	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864931	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.59	chr6	+	2949	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	254.539533847132	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864931	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874921_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.6	chr6	+	6335	23	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-33	0	intron_retention	FALSE	non_canonical	0	0	junction_2	254.440319196974	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864876	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.60	chr6	+	5515	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-6	-7	intron_retention	FALSE	canonical	0	0	junction_2	201.703740075217	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87864932	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.62	chr6	+	5209	23	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	254.440319196974	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864938	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866110_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.64	chr6	+	2916	24	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	295.439085613479	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTATACTCAAAGAAA	NA	False	NA	-1	True	AATAAA	-19	NA	87864941	87889510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879420_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885609_87886645_87886785_87887021_87887121_87889153
ES.28977.66	chr6	+	2982	25	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	290.744685630232	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864945	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87888813_87888874_87889153
ES.28977.67	chr6	+	2882	23	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	26	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	261.508339389489	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCTCATCCCTATGATAA	NA	False	NA	19	True	AATAAA	-39	NA	87864964	87889530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87881035_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.68	chr6	+	3883	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	35	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	260.452562264384	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87864973	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.69	chr6	+	2649	23	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	259.759663236285	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87864981	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870833_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.7	chr6	+	3996	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-30	-7	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	197.076572985819	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87864879	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.70	chr6	+	3879	23	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	1256	3	1113	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	202.737713754773	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87866051	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.71	chr6	+	4573	22	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	1705	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	201.839511019564	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87866643	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870261_87870579_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.72	chr6	+	4139	16	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-1998	-3	intron_retention	FALSE	canonical	1	8	junction_7	227.762937185916	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATATTTATACTCAAAGAA	NA	False	NA	-2	True	AATAAA	-18	NA	87868926	87889509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87873098_87874934_87875031_87879179_87879424_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.73	chr6	+	7942	12	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-1728	0	intron_retention	FALSE	non_canonical	0	0	junction_1	254.883963227865	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87869196	87890577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87870261_87870579_87873098_87874934_87875031_87879179_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.74	chr6	+	4669	12	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	183	-3	intron_retention	FALSE	canonical	3	791	junction_4	60.8444704700177	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87872620	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87872744_87872908_87873098_87874934_87875031_87879179_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.75	chr6	+	4291	9	NNC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	4396	-3	intron_retention	FALSE	canonical	1	1	junction_4	294.763888561676	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGTCAGCCTCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	87879180	87890574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884760_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.76	chr6	+	2140	7	ISM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	17382	7	-3576	-7	3prime_fragment	FALSE	canonical	3	791	junction_1	65.175830557722	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87882177	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.78	chr6	+	1488	7	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	-194	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.39858683532	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCTGGCTCTCACCC	2770	False	NA	40	True	AATAAA	-26	NA	87890722	87913607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87890828_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ES.28977.79	chr6	+	1492	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	-16	-12	-16	12	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTATTTCCTGGTATT	2948	False	NA	56	True	AATAAA	-42	NA	87890900	87913623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ES.28977.8	chr6	+	2862	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-30	5	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	206.233471817645	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTCAAAGAAACCGTCTC	NA	False	NA	6	True	AATAAA	-26	NA	87864879	87889517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.80	chr6	+	1553	8	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-4	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	509.838830075801	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2960	False	NA	24	True	AATAAA	-10	NA	87890912	87913591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87890994_87891472_87891678_87893644_87893750_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ES.28977.82	chr6	+	1253	6	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-2	-19	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	457.457058093981	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTTGGCTGGCAAGAG	2977	False	NA	25	True	AATAAA	-11	NA	87890929	87913592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87910223_87910417_87913071
ES.28977.83	chr6	+	1556	8	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-1	-18	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	425.697746562712	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGGCTGGCAAGAGT	2978	False	NA	26	True	AATAAA	-12	NA	87890930	87913593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87909840_87909965_87910223_87910417_87913071
ES.28977.84	chr6	+	5403	6	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-2	-20	intron_retention	FALSE	canonical	0	0	junction_4	459.267416653958	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2985	False	NA	24	True	AATAAA	-10	NA	87890937	87913591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87902793_87910223_87910417_87913071
ES.28977.86	chr6	+	5707	7	NNC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	9	-18	intron_retention	FALSE	non_canonical	0	0	junction_5	428.702078630629	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGGCTGGCAAGAGT	2996	False	NA	26	True	AATAAA	-12	NA	87890948	87913593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87904976_87908113_87910417_87913071
ES.28977.87	chr6	+	1547	8	NNC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-10	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	545.257063508693	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	2998	False	NA	24	True	AATAAA	-10	NA	87890950	87913591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87912543_87912681_87913071
ES.28977.88	chr6	+	1985	5	NNC	ENSMUSG00000030060.15	novel	902	6	NA	NA	-10	5551	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	476.247506555152	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGAGAAGACTTAAGTA	2998	False	NA	NA	False	NA	NA	NA	87890950	87904084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902617
ES.28977.9	chr6	+	6637	22	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	-23	-7	intron_retention	FALSE	canonical	0	0	junction_2	200.55468432798	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGGTGTCAGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	87864886	87890570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870936_87871022_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ES.28977.90	chr6	+	8849	6	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	690	junction_1	195.243847534308	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCAAGAGTTCTGGCTC	3000	False	NA	34	True	AATAAA	-20	NA	87890952	87913601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87910417_87913071
ES.28977.91	chr6	+	1867	6	FSM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	-313	18	14	-18	multi-exon	FALSE	canonical	0	0	junction_4	461.093656430014	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGGCTGGCAAGAGT	3022	False	NA	26	True	AATAAA	-12	NA	87890974	87913593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ES.28977.92	chr6	+	6474	4	NNC	ENSMUSG00000030060.15	novel	1572	6	NA	NA	3639	-21	intron_retention	FALSE	canonical	0	0	junction_2	494.201263544407	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAACCTTGGCTGGCAAG	NA	False	NA	23	True	AATAAA	-9	NA	87898544	87913590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87898634_87902613_87904864_87906800_87910417_87913071
ES.28977.93	chr6	+	3309	1	NIC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	308	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCTTGGCTGGCAAGA	NA	False	NA	24	True	AATAAA	-10	NA	87910282	87913591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_87910300_87913600
ES.28978.1	chr6	+	177	1	Intergenic	novelGene_24063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGTGAATTG	NA	False	NA	NA	False	NA	NA	NA	87927568	87927745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_87927600_87927700
ES.28979.1	chr6	+	1680	2	FSM	ENSMUSG00000084950.8	ENSMUST00000134600.2	1434	2	-222	-24	-222	24	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTTAAACTATATTGTA	NA	False	NA	NA	False	NA	NA	NA	87957642	87961186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87958078_87959941
ES.28979.10	chr6	+	2645	1	Antisense	novelGene_ENSMUSG00000108268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTAGAGTTTCCTCAA	NA	False	NA	NA	False	NA	NA	NA	88015258	88017903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_88015300_88017900
ES.28979.11	chr6	+	177	1	Intergenic	novelGene_24073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAAAAT	2921	False	NA	NA	False	NA	NA	NA	88051001	88051178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88051000_88051200
ES.28979.12	chr6	+	210	1	Intergenic	novelGene_24074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	3317	False	NA	NA	False	NA	NA	NA	88051397	88051607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88051400_88051600
ES.28979.13	chr6	+	2344	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	-35	1324	-35	593	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCTCATGTAATTCT	502	False	NA	30	True	AATAAA	-36	NA	88061428	88080962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.14	chr6	+	3311	9	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	-5	597	intron_retention	FALSE	canonical	3	2268	junction_5	115.163742123986	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCATGTAATTCTGAAG	532	False	NA	34	True	AATAAA	-40	NA	88061458	88080966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88079203_88080346
ES.28979.15	chr6	+	2125	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	-1	579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	778.060758045203	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTGTACTGAAAAATC	536	False	NA	16	True	AATAAA	-22	NA	88061462	88080948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079068_88080382
ES.28979.17	chr6	+	3365	8	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	8	570	intron_retention	FALSE	canonical	3	2268	junction_5	113.802370765449	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTTTTGCTGTAC	545	False	NA	7	True	AATAAA	-13	NA	88061471	88080939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88079203_88080346
ES.28979.18	chr6	+	2266	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	9	568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	779.331923453403	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	546	False	NA	5	True	AATAAA	-11	NA	88061472	88080937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077741_88077843_88077964_88078956_88079203_88080346
ES.28979.19	chr6	+	2239	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	10	570	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	995.651669467581	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTTTTGCTGTAC	547	False	NA	7	True	AATAAA	-13	NA	88061473	88080939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077879_88077964_88078956_88079207_88080351
ES.28979.2	chr6	+	2961	2	NNC	ENSMUSG00000084950.8	novel	1434	2	NA	NA	16	22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCTTTAAACTATATTG	NA	False	NA	NA	False	NA	NA	NA	87957880	87961184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_87959599_87959941
ES.28979.22	chr6	+	2068	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	20	1545	20	372	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAAACTTGGCTGTG	557	False	NA	NA	False	AAAAAG	-28	NA	88061483	88080741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.23	chr6	+	2255	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	20	570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	778.060758045203	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTTTTGCTGTAC	557	False	NA	7	True	AATAAA	-13	NA	88061483	88080939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079207_88080361
ES.28979.25	chr6	+	6809	8	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	31	576	intron_retention	FALSE	canonical	3	2268	junction_4	118.079703279313	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGCTGTACTGAAAA	568	False	NA	13	True	AATAAA	-19	NA	88061494	88080945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88079203_88080346
ES.28979.26	chr6	+	3610	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	31	-8	31	8	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTGTTAGAAGAAATAT	568	False	NA	NA	False	AATAAA	-23	NA	88061494	88082294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.3	chr6	+	3304	1	Genic_Genomic	ENSMUSG00000084950.8	novel	NA	NA	NA	NA	25	31	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATATTGTAAATTATA	NA	False	NA	NA	False	NA	NA	NA	87957889	87961193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_87957900_87961200
ES.28979.30	chr6	+	4599	9	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	32	5	intron_retention	FALSE	canonical	3	2268	junction_5	115.163742123986	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGCTTGTTAGAAGAAA	569	False	NA	NA	False	AATAAA	-20	NA	88061495	88082291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88079203_88080346
ES.28979.31	chr6	+	2256	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	32	577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	778.060758045203	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	569	False	NA	14	True	AATAAA	-20	NA	88061495	88080946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079207_88080355
ES.28979.33	chr6	+	3738	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	33	568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	781.02337107979	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	570	False	NA	5	True	AATAAA	-11	NA	88061496	88080937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88063264_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.35	chr6	+	1941	8	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	40	577	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	877.812936234371	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	577	False	NA	14	True	AATAAA	-20	NA	88061503	88080946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072686_88077904_88077964_88078956_88079203_88080346
ES.28979.36	chr6	+	2256	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	40	568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1028.19042767162	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	577	False	NA	5	True	AATAAA	-11	NA	88061503	88080937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076364_88077610_88077750_88077843_88077964_88078956_88079207_88080346
ES.28979.37	chr6	+	6804	8	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	40	577	intron_retention	FALSE	canonical	3	2412	junction_3	87.7377818693118	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTGCTGTACTGAAAAA	577	False	NA	14	True	AATAAA	-20	NA	88061503	88080946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88076356_88077610_88077750_88077843_88079203_88080346
ES.28979.38	chr6	+	3225	9	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	40	592	intron_retention	FALSE	canonical	3	98	junction_7	790.063407265518	1242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTCATGTAATTC	577	False	NA	29	True	AATAAA	-35	NA	88061503	88080961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077879_88079203_88080346
ES.28979.39	chr6	+	2162	10	NNC	ENSMUSG00000030062.8	novel	855	5	NA	NA	445	592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	781.02337107979	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTCATGTAATTC	1063	False	NA	29	True	AATAAA	-35	NA	88061989	88080961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88062157_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.4	chr6	+	1742	8	Fusion	ENSMUSG00000030062.8_ENSMUSG00000084950.8	novel	815	3	NA	NA	20	590	multi-exon	FALSE	canonical	0	0	junction_2	1117.3414876393	1277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAATCTCTCATGTAAT	NA	False	NA	27	True	AATAAA	-33	NA	87958684	88080959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_87958867_87959941_87960091_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.40	chr6	+	2052	8	ISM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	5363	1347	-3972	570	3prime_fragment	FALSE	canonical	3	2268	junction_3	112.784786931861	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTTTTGCTGTAC	5900	False	NA	7	True	AATAAA	-13	NA	88066826	88080939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ES.28979.41	chr6	+	968	3	ISM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	16379	1339	-710	578	3prime_fragment	FALSE	canonical	3	2413	junction_1	103	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCTGTACTGAAAAAT	2461	False	NA	15	True	AATAAA	-21	NA	88077842	88080947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88077964_88078956_88079203_88080346
ES.28979.5	chr6	+	4076	1	FSM	ENSMUSG00000108049.2	ENSMUST00000204835.2	3539	1	2067	-2604	2067	2604	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTTCTGTCCTTTTCTC	NA	False	NA	NA	False	AATAAA	-35	NA	87965239	87969315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_87965200_87969300
ES.28979.6	chr6	+	1668	1	Antisense	novelGene_ENSMUSG00000108227.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGCCAATAAAACACCAAG	NA	False	NA	NA	False	AATAAA	-44	NA	87970321	87971989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_87970300_87972000
ES.28979.7	chr6	+	6004	2	Antisense	novelGene_ENSMUSG00000079477.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACTTACATAAATCTAAA	3930	False	NA	NA	False	NA	NA	NA	87985640	87991730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_87988470_87988555
ES.28979.8	chr6	+	1288	1	Antisense	novelGene_ENSMUSG00000079477.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTAGGAGGAAACGATA	NA	False	NA	NA	False	AAGAAA	-43	NA	87995693	87996981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_87995700_87997000
ES.28979.9	chr6	+	1668	1	Intergenic	novelGene_24069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88015258	88016926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88015300_88016900
ES.2898.1	chr10	+	179	1	Intergenic	novelGene_2226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTGTACATACA	NA	False	NA	NA	False	NA	NA	NA	61464476	61464655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61464500_61464700
ES.28980.1	chr6	-	1610	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	-394	1	-394	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTCGTTGTCTTGTG	6515	False	NA	-3	True	AATAAA	-15	NA	87959013	87957403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87957400_87959000
ES.28980.2	chr6	-	944	2	Genic_Genomic	ENSMUSG00000044927.7	novel	1217	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTCGTTGTCTTGTG	6909	False	NA	-3	True	AATAAA	-15	NA	87958619	87957403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_87958153_87958424
ES.28981.1	chr6	-	273	1	Intergenic	novelGene_24064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAATAAAAAAATAAAAA	7201	False	NA	NA	False	NA	NA	NA	87974436	87974163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87974200_87974400
ES.28981.2	chr6	-	158	1	Intergenic	novelGene_24065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	7201	False	NA	NA	False	NA	NA	NA	87974436	87974278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_87974300_87974400
ES.28982.1	chr6	-	2161	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	-3	1	-3	-1	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTCTGTCTTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	88022255	87976088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.10	chr6	-	2201	7	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	852.516405837578	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022203	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88015396_88015505_88022054
ES.28982.12	chr6	-	2233	6	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	742.381411405216	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022236	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981867_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.13	chr6	-	6426	4	NIC	ENSMUSG00000079477.10	novel	550	5	NA	NA	10	-6	intron_retention	FALSE	canonical	3	1830	junction_3	86.8421300726528	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022203	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.14	chr6	-	2072	7	NNC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	683.24414052047	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022227	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977151_87977195_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.15	chr6	-	2204	7	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	822.875328075618	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022203	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981974_87982194_87988625_87988737_87989288_87989416_87990619_87990681_88022054
ES.28982.16	chr6	-	1774	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	12	373	12	-36	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTCCTTATATTC	NA	False	NA	0	True	ATTAAA	-21	NA	88022240	87976460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.17	chr6	-	5049	1	NIC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	15254	-38	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	831	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTTTTCCTTATAT	126	False	NA	-2	True	ATTAAA	-19	NA	87981511	87976462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87976500_87981500
ES.28982.18	chr6	-	3384	5	ISM	ENSMUSG00000079477.10	ENSMUST00000113597.8	1859	7	4285	40	4285	-40	3prime_fragment	FALSE	canonical	3	1571	junction_1	174.585222742362	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTTTTTCCTTAT	8041	False	NA	-4	True	ATTAAA	-17	NA	87992480	87976464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619
ES.28982.19	chr6	-	1758	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	39	-40	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTTTTTCCTTAT	NA	False	NA	-4	True	ATTAAA	-17	NA	88022141	87976464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ES.28982.2	chr6	-	1721	7	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	683.24414052047	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTGCTGTCTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	88022213	87976091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87976978_87977372_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.20	chr6	-	5401	5	NIC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	-4	-40	combination_of_known_junctions	FALSE	canonical	3	1675	junction_1	124.914720909907	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTTTTTCCTTAT	NA	False	NA	-4	True	ATTAAA	-17	NA	88022231	87976464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.21	chr6	-	1545	7	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	822.875328075618	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGATTGTGTGTTTA	NA	False	NA	1	True	ATTAAA	-22	NA	88022225	87976785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981974_87982194_87988625_87988737_87989288_87989416_87990619_87990681_88022054
ES.28982.22	chr6	-	1615	8	NNC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	873.984775471004	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	False	NA	0	True	ATTAAA	-21	NA	88022222	87976786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88003353_88003452_88022054
ES.28982.23	chr6	-	1448	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	12	699	12	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	False	NA	0	True	ATTAAA	-21	NA	88022240	87976786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.24	chr6	-	2132	5	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1571	junction_1	163.140085509356	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	False	NA	0	True	ATTAAA	-21	NA	88022231	87976786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87977513_87981152_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.25	chr6	-	154	1	Intergenic	novelGene_24066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	781	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATCTTTAAAAAAA	8376	False	NA	NA	False	NA	NA	NA	88005300	88005146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88005100_88005300
ES.28982.26	chr6	-	178	1	Intergenic	novelGene_24067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	780	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAGAAAATG	4799	False	NA	NA	False	NA	NA	NA	88008877	88008699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88008700_88008900
ES.28982.27	chr6	-	174	1	Intergenic	novelGene_24068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	777	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGCACTTGGGAGGC	6734	False	NA	NA	False	NA	NA	NA	88014129	88013955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88014000_88014100
ES.28982.3	chr6	-	5869	6	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	3	112	junction_5	859.503438038499	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCTGCTGTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	88022240	87976092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ES.28982.4	chr6	-	2808	5	NIC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	1571	junction_1	163.140085509356	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCTGCTGTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	88022213	87976092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87977513_87981152_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.5	chr6	-	5782	5	NIC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	3	1675	junction_1	124.914720909907	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCTGCTGTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	88022240	87976092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.6	chr6	-	2217	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACAGCTGCTGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	88022231	87976095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
ES.28982.7	chr6	-	1735	7	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	683.24414052047	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAACAGCTGCTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	88022231	87976097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87976953_87977345_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ES.28982.8	chr6	-	2233	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113598.8	2031	6	-201	-1	13	1	multi-exon	FALSE	canonical	1	7	junction_5	727.359718433733	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAACAGCTGCTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	88022200	87976097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88021918
ES.28982.9	chr6	-	2054	5	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	779.625350729439	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	False	NA	NA	False	AATAAA	-5	NA	88022219	87976104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989422_88022054
ES.28983.1	chr6	-	1418	2	Intergenic	novelGene_24070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCCCCAAGA	NA	False	NA	NA	False	NA	NA	NA	88029190	88027093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88028488_88029166
ES.28984.1	chr6	-	176	1	Intergenic	novelGene_24071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTCTCCTGA	6937	False	NA	NA	False	NA	NA	NA	88038292	88038116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88038100_88038300
ES.28985.1	chr6	-	175	1	Intergenic	novelGene_24072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGCAAGCAGGAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	88045339	88045164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88045200_88045300
ES.28986.1	chr6	-	159	1	Intergenic	novelGene_24075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAATAAATCTTTAAAA	8540	False	NA	NA	False	NA	NA	NA	88066497	88066338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88066300_88066500
ES.28987.1	chr6	+	171	1	Intergenic	novelGene_24076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	88134181	88134352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88134200_88134400
ES.28988.1	chr6	-	5156	1	Intergenic	novelGene_24077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCATTTTCTCTTCTA	9969	False	NA	NA	False	NA	NA	NA	88156197	88151041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88151000_88156200
ES.28989.1	chr6	+	3414	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	-279	0	-279	0	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88170593	88184014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.10	chr6	+	5278	4	NIC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	335	-2	intron_retention	FALSE	canonical	3	138	junction_3	5.55777733351102	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCTGTCGCCTGTTGA	NA	False	NA	10	True	AATAAA	-11	NA	88175650	88184010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88175864_88176498_88176772_88177200_88179547_88181564
ES.28989.11	chr6	+	3730	4	NNC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	335	-567	intron_retention	FALSE	canonical	3	12	junction_1	67.2821587710211	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAACCTA	NA	False	NA	-18	True	NA	NA	NA	88175650	88183445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88177843_88179403_88179547_88181564_88181691_88182176
ES.28989.12	chr6	+	2315	5	NNC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	335	-534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.6145629723711	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCACAGTCCTTTGAGT	NA	False	NA	15	True	AATAAA	-23	NA	88175650	88183478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88175735_88177185_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.13	chr6	+	3724	5	ISM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	335	-2	335	0	intron_retention	FALSE	canonical	3	138	junction_4	5.33853912601566	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88175650	88184014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564
ES.28989.2	chr6	+	2835	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	-253	553	-253	-551	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACAAACCAGGCCTGAGC	NA	False	NA	-2	True	AATAAA	-6	NA	88170619	88183461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.3	chr6	+	6587	4	NIC	ENSMUSG00000015053.15	novel	3135	6	NA	NA	-1950	0	intron_retention	FALSE	canonical	3	138	junction_2	11.8602979164381	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88173365	88184014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.4	chr6	+	3260	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	313	-2	313	0	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88175628	88184014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.5	chr6	+	2715	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	330	526	330	-526	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTTGAGTGGTTCTTG	NA	False	NA	23	True	AATAAA	-31	NA	88175645	88183486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.6	chr6	+	2107	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	331	1133	331	126	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAATAATTTATT	NA	False	NA	NA	False	NA	NA	NA	88175646	88182879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.8	chr6	+	3666	5	NIC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	334	0	intron_retention	FALSE	canonical	3	138	junction_3	10.280442597476	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGCCTGTTGAGT	NA	False	NA	12	True	AATAAA	-13	NA	88175649	88184012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88175864_88176498_88177843_88179400_88179547_88181564_88181691_88182176
ES.28989.9	chr6	+	2074	4	ISM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	335	3666	335	723	5prime_fragment	FALSE	canonical	3	148	junction_2	1.4142135623731	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGAGTTTAAATCGTT	NA	False	NA	NA	False	AATAAA	-23	NA	88175650	88180346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400
ES.2899.1	chr10	+	1596	12	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-466	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1161.2762144645	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGCGTCGGTACTGTG	1586	False	NA	1	True	NA	NA	NA	61483864	61509988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484165_61484439_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.10	chr10	+	4046	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	20	44	intron_retention	FALSE	canonical	3	3777	junction_3	131.285477274563	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGTCGGTACTGTGTTT	2072	False	NA	4	True	NA	NA	NA	61484350	61509991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.11	chr10	+	1275	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	1266.29696359108	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTAGGATAGTT	2095	False	NA	12	True	AATAAA	-13	NA	61484373	61509944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61509597
ES.2899.14	chr10	+	4082	10	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1261.66231713131	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2101	False	NA	15	True	AATAAA	-16	NA	61484379	61509947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61500769_61501008_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.15	chr10	+	1299	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1208.56809489577	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	2105	False	NA	10	True	AATAAA	-11	NA	61484383	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499475_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.16	chr10	+	3213	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	3777	junction_3	134.927781323342	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2106	False	NA	15	True	AATAAA	-16	NA	61484384	61509947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61508213_61509597
ES.2899.17	chr10	+	5420	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-4	2292	intron_retention	FALSE	canonical	1	1	junction_10	1208.26969257695	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTGTTTGAGTCTGGG	2117	False	NA	NA	False	NA	NA	NA	61484395	61512239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597_61509784_61510612
ES.2899.18	chr10	+	1276	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1208.56809489577	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	2119	False	NA	10	True	AATAAA	-11	NA	61484397	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499484_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.19	chr10	+	1378	12	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1554.81840240679	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	2119	False	NA	10	True	AATAAA	-11	NA	61484397	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61506736_61506823_61508169_61508213_61509597
ES.2899.2	chr10	+	1437	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	-30	-43	-30	43	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGTCGGTACTGTGTT	2022	False	NA	3	True	NA	NA	NA	61484300	61509990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.22	chr10	+	4039	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	3777	junction_3	133.833045062187	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTAGGATAGTT	2121	False	NA	12	True	AATAAA	-13	NA	61484399	61509944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61506267_61508169_61508213_61509597
ES.2899.23	chr10	+	5849	9	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	2	-5	intron_retention	FALSE	canonical	3	3777	junction_3	139.23608548074	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	2123	False	NA	10	True	AATAAA	-11	NA	61484401	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61508213_61509597
ES.2899.24	chr10	+	1363	12	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	2	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1550.07667632261	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTAGGATAGTTTCTT	2123	False	NA	16	True	AATAAA	-17	NA	61484401	61509948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499275_61499345_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.25	chr10	+	1432	12	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	61	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1550.87561511351	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTAGGATAGTT	2182	False	NA	12	True	AATAAA	-13	NA	61484460	61509944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61508920_61509122_61509597
ES.2899.26	chr10	+	2332	10	ISM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	1796	4	1727	-4	3prime_fragment	FALSE	canonical	3	3777	junction_2	134.617244323065	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTGGCTTAGGATAGT	3848	False	NA	11	True	AATAAA	-12	NA	61486126	61509943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.27	chr10	+	193	1	Intergenic	novelGene_2229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	847	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATCAGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	61494474	61494667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61494500_61494700
ES.2899.28	chr10	+	634	4	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	6480	-5	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_1	1891.50334096689	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	NA	False	NA	10	True	AATAAA	-11	NA	61505947	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61506124_61506196_61506267_61508169_61508213_61509597
ES.2899.3	chr10	+	1360	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1216.34107058834	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGAAACTTGGCTTAG	2041	False	NA	5	True	AATAAA	-6	NA	61484319	61509937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502823_61503373_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.4	chr10	+	2756	10	ISM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	-7	0	-7	0	intron_retention	FALSE	canonical	3	3777	junction_3	133.54381534644	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2045	False	NA	15	True	AATAAA	-16	NA	61484323	61509947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169
ES.2899.5	chr10	+	1623	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1835.42148837808	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTAGGATAGTT	2048	False	NA	12	True	AATAAA	-13	NA	61484326	61509944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61498361_61498663_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61509597
ES.2899.6	chr10	+	1349	11	NNC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1212.40945641314	885	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTGGCTTAGGATAG	2053	False	NA	10	True	AATAAA	-11	NA	61484331	61509942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506258_61508169_61508213_61509597
ES.2899.7	chr10	+	1259	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	1	104	1	-104	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCGTGGGGACATGGAA	2053	False	NA	-89	True	ATTAAA	-12	NA	61484331	61509843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.8	chr10	+	1902	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	5	-3	intron_retention	FALSE	canonical	3	3777	junction_3	120.021294406914	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTAGGATAGTT	2057	False	NA	12	True	AATAAA	-13	NA	61484335	61509944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61503450_61506196_61506267_61508169_61508213_61509597
ES.2899.9	chr10	+	5422	9	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	3841	junction_5	109.289109132612	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2061	False	NA	15	True	AATAAA	-16	NA	61484339	61509947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61484571_61487338_61487398_61495227_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ES.28990.1	chr6	-	1984	1	Antisense	novelGene_ENSMUSG00000015053.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGATGGGGGTTGTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	88175531	88173547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_88173500_88175500
ES.28991.1	chr6	+	5834	2	Antisense	novelGene_ENSMUSG00000107776.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACTTATGCAATCTG	NA	False	NA	NA	False	NA	NA	NA	88187392	88194807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_88187473_88189053
ES.28991.2	chr6	+	2115	2	Antisense	novelGene_ENSMUSG00000107776.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGAAGTGTTGG	2820	False	NA	NA	False	NA	NA	NA	88192723	88195048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_88194640_88194849
ES.28992.1	chr6	-	2084	1	Intergenic	novelGene_24078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88193143	88191059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88191100_88193100
ES.28993.1	chr6	+	157	1	Intergenic	novelGene_24079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATATTT	2498	False	NA	NA	False	NA	NA	NA	88224785	88224942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88224800_88224900
ES.28994.1	chr6	+	221	1	Intergenic	novelGene_24083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAATCTTAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88291535	88291756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88291500_88291800
ES.28995.1	chr6	+	183	1	Intergenic	novelGene_24085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTAGATGGAGTG	NA	False	NA	NA	False	NA	NA	NA	88327545	88327728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88327500_88327700
ES.28996.1	chr6	+	159	1	Intergenic	novelGene_24086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	88405716	88405875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88405700_88405900
ES.28997.1	chr6	+	176	1	Intergenic	novelGene_24087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAACAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	88415245	88415421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88415200_88415400
ES.28998.1	chr6	-	2654	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	25	0	0	0	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGATCAAATGACTT	NA	False	NA	-8	True	ATTAAA	-16	NA	88423496	88234315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.10	chr6	-	2210	8	FSM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_1	203.93836603949	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGTGCCCATAGTCT	NA	False	NA	-15	True	AATAAA	-14	NA	88423509	88234852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88235374_88249003_88249084_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.11	chr6	-	2165	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	2983	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	207.168258910481	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGTGCCCATAGTCT	NA	False	NA	-15	True	AATAAA	-14	NA	88413834	88234852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88235374_88258530_88258688_88274558_88275219_88353185_88353394_88413215
ES.28998.13	chr6	-	1207	4	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	226.405732161435	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGTGCCCATAGTCT	NA	False	NA	-15	True	AATAAA	-14	NA	88423508	88234852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88235374_88258530_88258688_88353185_88353394_88423187
ES.28998.14	chr6	-	1866	5	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	197.444137669367	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423509	88234854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88235374_88258530_88258688_88274558_88275219_88353185_88353394_88423187
ES.28998.15	chr6	-	1941	6	NNC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	223.311083468779	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423478	88234854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88235374_88258530_88258688_88274558_88275219_88279733_88279840_88353185_88353394_88423187
ES.28998.16	chr6	-	1842	1	Intergenic	novelGene_24080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGTCAGAGACCCAC	NA	False	NA	NA	False	NA	NA	NA	88238071	88236229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88236200_88238100
ES.28998.17	chr6	-	2961	1	Intergenic	novelGene_24081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAATAAAATAATCAAA	2983	False	NA	NA	False	NA	NA	NA	88265856	88262895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88262900_88265900
ES.28998.18	chr6	-	4717	5	ISM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	1	36438	1	3612	5prime_fragment	FALSE	canonical	3	371	junction_1	52.16799785309	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTGACTTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	88423508	88271292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.19	chr6	-	3161	2	Intergenic	novelGene_24082	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAGAG	NA	False	NA	NA	False	GGGGCT	-32	NA	88279466	88276044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88277015_88277275
ES.28998.2	chr6	-	4551	1	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	177949	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGTGATCAAATGAC	NA	False	NA	-10	True	ATTAAA	-14	NA	88238868	88234317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88234300_88238900
ES.28998.20	chr6	-	5726	6	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	2	-9715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.95913433189	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTCTGTCTTCATCAC	NA	False	NA	NA	False	AATAAA	-23	NA	88423507	88284802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88285441_88285492_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.21	chr6	-	2304	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-3	-13169	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGAGTGCTTTATC	NA	False	NA	NA	False	TTTAAA	-15	NA	88423487	88288256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.22	chr6	-	1425	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-3	-14046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.6975982133	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGTGTCCATGTTGACT	NA	False	NA	NA	False	NA	NA	NA	88423487	88289133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88289791_88332466_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.23	chr6	-	1017	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	2	-14476	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	202.243664919324	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGTGCCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	88423507	88289563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.24	chr6	-	1041	6	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	-14476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.673505152606	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGTGCCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	88423495	88289563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88289786_88329427_88329469_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.25	chr6	-	759	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	1	-14476	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	225.580362620508	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGTGCCAAGCCC	NA	False	NA	NA	False	NA	NA	NA	88423508	88289563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88289791_88332464_88332630_88335527_88335625_88353185_88353394_88423446
ES.28998.26	chr6	-	3070	1	Intergenic	novelGene_24084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88315344	88312274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88312300_88315300
ES.28998.3	chr6	-	2742	8	NNC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.93836603949	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGTGATCAAATGAC	NA	False	NA	-10	True	ATTAAA	-14	NA	88423487	88234317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88235374_88257480_88257580_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.4	chr6	-	2003	6	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCTGTGATCAAATG	NA	False	NA	-12	True	ATTAAA	-12	NA	88423509	88234319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.5	chr6	-	2210	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	-62	531	-62	8	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCATAGTCTGCCTGT	NA	False	NA	-9	True	AATAAA	-20	NA	88423583	88234846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.6	chr6	-	1699	1	NIC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	180272	8	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCATAGTCTGCCTGT	NA	False	NA	-9	True	AATAAA	-20	NA	88236545	88234846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88234800_88236500
ES.28998.7	chr6	-	1472	6	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	158.228189650264	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTGCCCATAGTCTGC	NA	False	NA	-13	True	AATAAA	-16	NA	88423509	88234850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88235374_88258530_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ES.28998.8	chr6	-	1461	5	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	87371	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	207.415645504383	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGTGCCCATAGTCT	NA	False	NA	-15	True	AATAAA	-14	NA	88329446	88234852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88235374_88258530_88258688_88274558_88275219_88289686_88289791_88329427
ES.28998.9	chr6	-	2097	7	NNC	ENSMUSG00000033216.10	novel	2679	7	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	224.822893258968	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGTGCCCATAGTCT	NA	False	NA	-15	True	AATAAA	-14	NA	88423469	88234852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88235374_88258530_88258688_88274558_88275219_88289686_88289791_88332464_88332630_88353185_88353394_88423187
ES.28999.1	chr6	+	1674	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	-2	3	-2	-3	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAGGTTTTTATATTT	NA	False	NA	28	True	AATAAA	-28	NA	88442388	88474551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.10	chr6	+	3802	11	NNC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	64	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	395.794845848199	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTAGGTTTTTAT	NA	False	NA	24	True	AATAAA	-24	NA	88442454	88474547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88456901_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.13	chr6	+	7071	9	NIC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	65	-10	intron_retention	FALSE	canonical	1	4	junction_2	432.838144547127	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTCTCTGTAGGTTTT	NA	False	NA	21	True	AATAAA	-21	NA	88442455	88474544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88442651_88444547_88444635_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88468601_88473389_88473482_88474209
ES.28999.15	chr6	+	1527	11	NNC	ENSMUSG00000030079.16	novel	666	5	NA	NA	-26	-11	at_least_one_novel_splicesite	FALSE	canonical	2	66	junction_1	378.916138479215	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTTCTCTGTAGGTTT	NA	False	NA	20	True	AATAAA	-20	NA	88442682	88474543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442806_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.16	chr6	+	4150	2	ISM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	27280	6	26962	-6	3prime_fragment	FALSE	canonical	3	1426	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGTAGGTTTTTATA	4181	False	NA	25	True	AATAAA	-25	NA	88469670	88474548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88473482_88474209
ES.28999.2	chr6	+	1547	10	NIC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	16	-9	combination_of_known_splicesites	FALSE	canonical	1	12	junction_8	410.44853514174	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCTCTGTAGGTTTTT	NA	False	NA	22	True	AATAAA	-22	NA	88442406	88474545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88473389_88473482_88474209
ES.28999.4	chr6	+	3330	11	NNC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	398.138782336009	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTAGGTTTTTAT	NA	False	NA	24	True	AATAAA	-24	NA	88442425	88474547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442651_88444547_88444635_88448361_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.5	chr6	+	8532	9	NIC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	35	-7	intron_retention	FALSE	canonical	3	1160	junction_1	84.1159913452846	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTAGGTTTTTAT	NA	False	NA	24	True	AATAAA	-24	NA	88442425	88474547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88461454_88462694_88468601_88473389_88473482_88474209
ES.28999.6	chr6	+	1622	11	NNC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	35	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	389.585215325223	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACTTCTCTGTAGGTT	NA	False	NA	19	True	AATAAA	-19	NA	88442425	88474542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473476_88474209
ES.28999.7	chr6	+	6947	11	NNC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	58	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	398.138782336009	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCTGTAGGTTTTTA	NA	False	NA	23	True	AATAAA	-23	NA	88442448	88474546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442651_88444547_88444852_88444937_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.8	chr6	+	1583	11	NNC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	61	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	398.382479534429	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCTGTAGGTTTTTA	NA	False	NA	23	True	AATAAA	-23	NA	88442451	88474546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88442651_88444570_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ES.28999.9	chr6	+	1405	10	NIC	ENSMUSG00000030079.16	novel	1675	11	NA	NA	64	-7	combination_of_known_splicesites	FALSE	canonical	3	38	junction_7	404.321318254506	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGTAGGTTTTTAT	NA	False	NA	24	True	AATAAA	-24	NA	88442454	88474547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88468497_88468601_88473389_88473482_88474209
ES.29.1	chr1	+	157	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATTTGAAC	NA	False	NA	NA	False	NA	NA	NA	6153959	6154116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_6154000_6154100
ES.290.1	chr1	-	2208	15	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	54.4660538354686	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTCTGGAGTTCCTTC	NA	False	NA	-1	True	ATTAAA	-18	NA	36722220	36601776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.11	chr1	-	2232	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	52.7337849106805	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722295	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36602102_36603410_36603564_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.12	chr1	-	2139	15	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	62	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	53.9423823374988	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722202	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683366_36698444_36698507_36699815_36700131_36721948
ES.290.14	chr1	-	6465	4	ISM	ENSMUSG00000046337.18	ENSMUST00000194839.6	712	6	10560	-1627	-1077	-5	3prime_fragment	FALSE	canonical	3	66	junction_1	4.10960933531265	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCATGGTTCTGGAGTT	NA	False	NA	-6	True	ATTAAA	-13	NA	36629475	36601781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36603564_36603911_36603990_36617599_36617726_36624996
ES.290.15	chr1	-	3857	12	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	31	5812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.6488299477611	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGTCTCCGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	36722233	36633244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36635468_36636767_36636921_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.16	chr1	-	3686	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	49	5812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5590144504252	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGTCTCCGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	36722215	36633244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36635468_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.17	chr1	-	1816	12	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	63	2384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.6336897753199	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCAAGGTGGCCTCTAA	NA	False	NA	NA	False	NA	NA	NA	36722201	36636672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36636917_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.18	chr1	-	3387	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	37	1642	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_8	39.9335698379196	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTGATTTTCACTT	NA	False	NA	NA	False	NA	NA	NA	36722227	36637414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.19	chr1	-	3262	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	37	-1640	37	1640	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCCTGGCTGATTTTCAC	NA	False	NA	NA	False	NA	NA	NA	36722227	36637416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.2	chr1	-	2313	16	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	59.5091029451237	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGTTCTGGAGTTCCT	NA	False	NA	-3	True	ATTAAA	-16	NA	36722222	36601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36719326_36719398_36721944
ES.290.20	chr1	-	1692	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	31	-64	31	64	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGCTTCTGCCGGCAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	36722233	36638992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.21	chr1	-	989	7	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	39176	62	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	63.0037476839451	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTAGCTTCTGCCGGCA	46	False	NA	NA	False	AGTAAA	-13	NA	36683088	36638994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36682974
ES.290.23	chr1	-	1779	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	49	46	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_8	39.9335698379196	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACTGTCTTATGCAA	NA	False	NA	NA	False	AATGAA	-45	NA	36722215	36639010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.24	chr1	-	1895	12	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	65	16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	62.3681418992657	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTAATTTTCTTAACATG	NA	False	NA	NA	False	AATACA	-43	NA	36722199	36639040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36640799_36640962_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.25	chr1	-	1614	10	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	39	16	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	53.4706565427348	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTAATTTTCTTAACATG	NA	False	NA	NA	False	AATACA	-43	NA	36722225	36639040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639644_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.26	chr1	-	1808	12	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.0964493603548	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCC	NA	False	NA	NA	False	AATACA	-27	NA	36722214	36639056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696016_36698444_36698507_36699815_36700131_36719326_36719398_36721944
ES.290.27	chr1	-	1566	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	71.2345421828483	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCC	NA	False	NA	NA	False	AATACA	-27	NA	36722201	36639056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36640799_36640848_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683366_36698444_36698507_36699815_36700131_36721948
ES.290.28	chr1	-	1676	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	62.069316090964	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-22	NA	36722238	36639061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36640799_36640848_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.29	chr1	-	1597	10	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	56	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.3516172362975	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTTCTTTACAAATGA	NA	False	NA	NA	False	AATACA	-8	NA	36722208	36639075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674234_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.3	chr1	-	2283	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	-4	7	-4	-3	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722268	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.30	chr1	-	3502	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	36666761	36663259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36663300_36666800
ES.290.31	chr1	-	177	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAATGAACA	7991	False	NA	NA	False	NA	NA	NA	36701950	36701773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36701800_36702000
ES.290.32	chr1	-	2196	2	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36717720	36708626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36710113_36717010
ES.290.33	chr1	-	269	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATATAGCTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	36711376	36711107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36711100_36711400
ES.290.34	chr1	-	5008	1	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	48	-78152	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGAAAAAAAAAGAAAAATG	NA	False	NA	NA	False	NA	NA	NA	36722216	36717208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36717200_36722200
ES.290.4	chr1	-	2143	16	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	54.0902948781018	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722261	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36722204
ES.290.5	chr1	-	2390	16	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	46.2106288879758	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722252	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
ES.290.6	chr1	-	1530	12	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	39193	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	57.211511296184	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	63	False	NA	-4	True	ATTAAA	-15	NA	36683071	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36682974
ES.290.8	chr1	-	2102	14	NIC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	51	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	53.3932602178064	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722213	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36602102_36603410_36603564_36603911_36603990_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.290.9	chr1	-	2175	15	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	82	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	53.0348364525716	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGTTCTGGAGTTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	36722182	36601779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639644_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ES.2900.1	chr10	+	2679	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	-61	-5	-50	5	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCTTTTTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	61516027	61529081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.10	chr10	+	2651	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516100	61529076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.11	chr10	+	3083	8	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	599.174670454523	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516101	61529076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61524499_61524983_61525552_61525685_61527063
ES.2900.12	chr10	+	876	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516101	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.13	chr10	+	2693	8	NNC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	588.763560873331	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516102	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516193_61520008_61520111_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.14	chr10	+	2585	7	NIC	ENSMUSG00000020088.11	novel	651	7	NA	NA	-5	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	665.889567921488	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516103	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61527063
ES.2900.15	chr10	+	2648	8	NNC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	598.725721675559	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAACTTGCCTCTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	61516103	61529071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525390_61525511_61525617_61525685_61527063
ES.2900.16	chr10	+	2958	6	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	1130	junction_4	100.223749680403	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516103	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61520658_61520733_61520844_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.17	chr10	+	1417	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	19	1177	-1	582	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGAAAGAGTTACAGACA	NA	False	NA	NA	False	TATAAA	-15	NA	61516107	61527899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.18	chr10	+	762	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	485.136750480384	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516113	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516218_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.19	chr10	+	2376	5	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	561.363741258731	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516113	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516172_61521321_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.2	chr10	+	800	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	-38	1851	-27	3	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516050	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.20	chr10	+	5930	7	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	6	-2	intron_retention	FALSE	canonical	3	31	junction_2	612.845752752409	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCCTCTCTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516114	61529074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61525685_61527063
ES.2900.21	chr10	+	2479	6	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	520.643678536482	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCCTCTCTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516116	61529074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61525552_61525685_61527063
ES.2900.22	chr10	+	4029	6	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	8	3	intron_retention	FALSE	canonical	3	1236	junction_3	68.0776027780062	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516116	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61525685_61527063
ES.2900.23	chr10	+	7254	5	ISM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	33	0	13	0	intron_retention	FALSE	canonical	3	1236	junction_3	72.7199250549669	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516121	61529076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153
ES.2900.26	chr10	+	2582	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	17	-19	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	485.136750480384	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGCTAAAATGAAC	NA	False	NA	NA	False	NA	NA	NA	61516125	61529057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516218_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.27	chr10	+	3091	9	NNC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	666.663790358378	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCCTCTCTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516141	61529074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61516193_61518744_61518795_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61524499_61524983_61525552_61525685_61527063
ES.2900.28	chr10	+	5474	6	ISM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	1605	0	1304	0	3prime_fragment	FALSE	canonical	3	1130	junction_4	103.567176267387	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61517693	61529076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.29	chr10	+	2429	5	ISM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	4754	8	-15	-8	3prime_fragment	FALSE	canonical	3	1130	junction_3	102.250916866305	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61520842	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.3	chr10	+	2746	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516074	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.30	chr10	+	2243	3	ISM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	6063	8	1294	-8	3prime_fragment	FALSE	canonical	3	1130	junction_1	75.5	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61522151	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61522258_61525552_61525685_61527063
ES.2900.31	chr10	+	4263	3	NNC	ENSMUSG00000020088.11	novel	483	2	NA	NA	1999	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	639.5	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61522856	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61524983_61525552_61525685_61527063
ES.2900.4	chr10	+	1174	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	-4	1443	-4	316	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGCTCTGCTGTGTGAC	NA	False	NA	NA	False	AGTAAA	-41	NA	61516084	61527633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.5	chr10	+	5911	6	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	1236	junction_3	68.0776027780062	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCCTCTCTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61516084	61529075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61525685_61527063
ES.2900.6	chr10	+	2476	6	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	536.060593589941	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516085	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61527063
ES.2900.7	chr10	+	809	8	NIC	ENSMUSG00000020088.11	novel	897	8	NA	NA	3	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516091	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.2900.8	chr10	+	6018	7	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	9	-8	intron_retention	FALSE	canonical	3	24	junction_1	616.596414917318	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAACTTGCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	61516097	61529068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61525685_61527063
ES.2900.9	chr10	+	851	8	FSM	ENSMUSG00000020088.11	ENSMUST00000219506.2	897	8	-46	92	9	3	multi-exon	FALSE	canonical	0	0	junction_2	587.872053273846	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCTTCCTCATGGA	NA	False	NA	29	True	AATAAA	-25	NA	61516097	61527225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61516193_61520012_61520111_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ES.29000.1	chr6	-	5049	1	Antisense	novelGene_ENSMUSG00000030079.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCAGGAATAAAACTGT	8135	False	NA	NA	False	AAGAAA	-39	NA	88457149	88452100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_88452100_88457100
ES.29001.1	chr6	-	3225	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	-75	22	-75	-22	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCATCTTTGTAAA	9020	False	NA	-17	True	AATAAA	-17	NA	88495962	88480582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.10	chr6	-	3149	12	NNC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	19	-24	intron_retention	FALSE	canonical	1	1	junction_9	287.409892454995	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9116	False	NA	-19	True	AATAAA	-15	NA	88495866	88480584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492427_88492485_88492552_88495352_88495421_88495667
ES.29001.12	chr6	-	2944	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-5	-24	intron_retention	FALSE	canonical	1	1	junction_7	299.86745405262	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9167	False	NA	-19	True	AATAAA	-15	NA	88495815	88480584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.15	chr6	-	10153	7	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-8	-26	intron_retention	FALSE	canonical	3	923	junction_1	46.6011444780776	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9164	False	NA	-21	True	AATAAA	-13	NA	88495818	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88483204_88483722_88483915_88484153_88484352_88485543_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.18	chr6	-	2833	10	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-28	-26	intron_retention	FALSE	canonical	0	0	junction_5	316.604126377889	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9144	False	NA	-21	True	AATAAA	-13	NA	88495838	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.2	chr6	-	8407	9	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-8	-22	intron_retention	FALSE	canonical	3	923	junction_2	50.7110379996308	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCATCTTTGTAAA	9164	False	NA	-17	True	AATAAA	-17	NA	88495818	88480582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.22	chr6	-	3143	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	7	-26	intron_retention	FALSE	canonical	3	923	junction_2	42.2242821134948	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9179	False	NA	-21	True	AATAAA	-13	NA	88495803	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492552_88495352_88495421_88495667
ES.29001.25	chr6	-	2942	12	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-9	-26	intron_retention	FALSE	canonical	0	0	junction_5	291.378570032836	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9198	False	NA	-21	True	AATAAA	-13	NA	88495784	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489184_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.26	chr6	-	3089	12	NNC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-8	-26	intron_retention	FALSE	canonical	0	0	junction_7	291.105814166125	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9164	False	NA	-21	True	AATAAA	-13	NA	88495818	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491282_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.27	chr6	-	3071	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-4	-26	intron_retention	FALSE	canonical	0	0	junction_8	296.024593572899	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9091	False	NA	-21	True	AATAAA	-13	NA	88495891	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492485_88492552_88495352_88495421_88495667
ES.29001.28	chr6	-	5109	9	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-12	-26	intron_retention	FALSE	canonical	3	923	junction_2	41.3277676024244	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCTCGTCATCTTTG	9160	False	NA	-21	True	AATAAA	-13	NA	88495822	88480586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88491427_88492325_88492552_88495352_88495421_88495667
ES.29001.29	chr6	-	3033	12	NNC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-13	-27	intron_retention	FALSE	canonical	0	0	junction_1	384.748345358623	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGCCTCGTCATCTTT	9194	False	NA	-22	True	AATAAA	-12	NA	88495788	88480587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88482262_88483120_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492490_88492552_88495352_88495421_88495667
ES.29001.3	chr6	-	3027	12	NNC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-1	-22	intron_retention	FALSE	non_canonical	0	0	junction_3	291.315000904633	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGTCATCTTTGTAAA	9208	False	NA	-17	True	AATAAA	-17	NA	88495774	88480582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88482276_88483126_88483204_88483722_88483901_88484149_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.30	chr6	-	3069	12	NNC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-8	-28	intron_retention	FALSE	canonical	0	0	junction_10	290.69543290314	974	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGCCTCGTCATCTT	9164	False	NA	-23	True	AATAAA	-11	NA	88495818	88480588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492546_88495352_88495421_88495667
ES.29001.32	chr6	-	3312	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-5	-28	intron_retention	FALSE	canonical	3	923	junction_2	45.7743377887654	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGCCTCGTCATCTT	9167	False	NA	-23	True	AATAAA	-11	NA	88495815	88480588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.33	chr6	-	1912	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	1	1259	-1	-37	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCATGTAATTTTTATTT	9096	False	NA	NA	False	NA	NA	NA	88495886	88481819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.34	chr6	-	155	1	Intergenic	novelGene_24088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	897	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	88486599	88486444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88486400_88486600
ES.29001.35	chr6	-	4944	2	FSM	ENSMUSG00000030082.15	ENSMUST00000155079.2	369	2	-112	-4463	0	96	multi-exon	FALSE	canonical	3	957	junction_1	0	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATAAAGCAGGGATA	9095	False	NA	NA	False	NA	NA	NA	88495887	88490696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88495421_88495667
ES.29001.36	chr6	-	5128	1	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-14	96	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	889	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATAAAGCAGGGATA	9158	False	NA	NA	False	NA	NA	NA	88495824	88490696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88490700_88495800
ES.29001.37	chr6	-	1140	4	NNC	ENSMUSG00000030082.15	novel	935	5	NA	NA	-9	93	intron_retention	FALSE	non_canonical	0	0	junction_1	462.357966178684	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTAAATAAAGCAGGG	9198	False	NA	NA	False	NA	NA	NA	88495784	88490699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88491429_88492325_88492552_88495352_88495421_88495667
ES.29001.38	chr6	-	4186	3	FSM	ENSMUSG00000030082.15	ENSMUST00000130807.2	794	3	-2903	-489	20	93	multi-exon	FALSE	canonical	3	1074	junction_2	1.5	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTAAATAAAGCAGGG	9117	False	NA	NA	False	NA	NA	NA	88495865	88490699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88491427_88492325_88492405_88492485
ES.29001.39	chr6	-	1983	4	NIC	ENSMUSG00000030082.15	novel	935	5	NA	NA	-1	93	intron_retention	FALSE	canonical	3	957	junction_3	48.1271464167804	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTAAATAAAGCAGGG	9171	False	NA	NA	False	NA	NA	NA	88495811	88490699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.4	chr6	-	5035	10	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-17	-24	intron_retention	FALSE	canonical	3	923	junction_2	48.2171016226493	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9155	False	NA	-19	True	AATAAA	-15	NA	88495827	88480584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.40	chr6	-	1063	5	FSM	ENSMUSG00000030082.15	ENSMUST00000130918.8	935	5	-66	-62	-11	62	multi-exon	FALSE	canonical	3	957	junction_4	50.4548065103811	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	9161	False	NA	NA	False	NA	NA	NA	88495821	88490730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.6	chr6	-	3002	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-8	-24	intron_retention	FALSE	canonical	0	0	junction_1	305.477331401202	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9164	False	NA	-19	True	AATAAA	-15	NA	88495818	88480584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29001.8	chr6	-	4890	11	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	-35	-24	intron_retention	FALSE	canonical	3	923	junction_2	48.9760145377306	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTCGTCATCTTTGTA	9060	False	NA	-19	True	AATAAA	-15	NA	88495922	88480584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ES.29002.1	chr6	-	1770	2	FSM	ENSMUSG00000033182.13	ENSMUST00000038804.4	1572	2	18	-216	15	216	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGACATAGTTTATTG	NA	False	NA	NA	False	AGTAAA	-16	NA	88604409	88594201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88595941_88604378
ES.29003.1	chr6	+	708	2	Intergenic	novelGene_24089	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCAACAAC	NA	False	NA	NA	False	NA	NA	NA	88629025	88633718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88629397_88633381
ES.29004.1	chr6	-	2178	1	Intergenic	novelGene_24090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTTGTGTGGTATGA	NA	False	NA	NA	False	NA	NA	NA	88644190	88642012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88642000_88644200
ES.29004.2	chr6	-	2915	3	Intergenic	novelGene_24091	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGGTGTTGTTGTTGTTG	NA	False	NA	7	True	NA	NA	NA	88670468	88644021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88646658_88657128_88657274_88670334
ES.29004.3	chr6	-	3033	5	Intergenic	novelGene_24092	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4142135623731	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTATTAGGTGTTGTT	NA	False	NA	0	True	NA	NA	NA	88670689	88644028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88646658_88657128_88657219_88663021_88663109_88670334_88670469_88670596
ES.29004.4	chr6	-	2919	4	Intergenic	novelGene_24093	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.63299316185545	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTGCTTGTACACTGA	NA	False	NA	-19	True	NA	NA	NA	88670411	88644047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88646658_88657128_88657274_88663021_88663109_88670334
ES.29004.5	chr6	-	3088	7	Intergenic	novelGene_24094	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATTGCTTGTACACTG	NA	False	NA	-20	True	NA	NA	NA	88670421	88644048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88646658_88653637_88653742_88655901_88655962_88657128_88657219_88663021_88663109_88665654_88665706_88670334
ES.29004.6	chr6	-	1992	2	Intergenic	novelGene_24095	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATGGCCTCCCAAT	NA	False	NA	NA	False	NA	NA	NA	88652701	88645040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88646686_88652354
ES.29004.7	chr6	-	2315	3	Intergenic	novelGene_24096	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTGAGTTGTCTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	88670421	88659173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88661315_88663021_88663109_88670334
ES.29005.1	chr6	+	3671	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	5	0	5	0	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTGTCTGCGTGTCTG	NA	False	NA	5	True	AATAAA	-20	NA	88701398	88805342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ES.29005.2	chr6	+	1789	2	FSM	ENSMUSG00000033174.18	ENSMUST00000151699.4	443	2	-41	-1305	17	1305	multi-exon	FALSE	canonical	3	13	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88701410	88704328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88701554_88702682
ES.29005.3	chr6	+	4032	8	FSM	ENSMUSG00000033174.18	ENSMUST00000163271.8	3991	8	-42	1	-42	-1	multi-exon	FALSE	canonical	2	4	junction_1	4.18939379960434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGTGTCTGCGTGTCT	NA	False	NA	4	True	AATAAA	-19	NA	88701643	88805341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ES.29005.4	chr6	+	3582	7	NNC	ENSMUSG00000033174.18	novel	460	2	NA	NA	27916	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.27309733985213	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGCCTGTGTCTGCGTG	5074	False	NA	1	True	AATAAA	-16	NA	88729974	88805338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88730190_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ES.29006.1	chr6	+	3777	1	Intergenic	novelGene_24097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAACTCAACTACCTTG	3946	False	NA	NA	False	NA	NA	NA	88806675	88810452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88806700_88810500
ES.29007.1	chr6	-	1786	12	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	132.928800926295	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6987	False	NA	-5	True	AATAAA	-20	NA	88818859	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
ES.29007.11	chr6	-	1787	11	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	5	-1	combination_of_known_splicesites	TRUE	canonical	1	4	junction_6	134.483493410902	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6975	False	NA	-5	True	AATAAA	-20	NA	88818871	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.12	chr6	-	2206	9	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	163	junction_8	101.047946540244	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6996	False	NA	-6	True	AATAAA	-19	NA	88818850	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88816473_88816608_88816754_88817691_88817883_88818750
ES.29007.16	chr6	-	2186	11	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-187	-2	intron_retention	FALSE	canonical	3	163	junction_10	101.098170112025	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6693	False	NA	-6	True	AATAAA	-19	NA	88819153	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817883_88818750
ES.29007.19	chr6	-	4517	6	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	7	-2	intron_retention	FALSE	canonical	3	189	junction_5	98.203054942298	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	7005	False	NA	-6	True	AATAAA	-19	NA	88818841	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815268_88815361_88815461_88815619_88816213_88816312_88816473_88816608_88816754_88817691
ES.29007.22	chr6	-	2043	11	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	5	-2	intron_retention	FALSE	canonical	1	8	junction_6	134.800185459813	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6975	False	NA	-6	True	AATAAA	-19	NA	88818871	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816027_88816213_88816312_88816473_88816608_88816754_88817691_88817883_88818750
ES.29007.23	chr6	-	3165	11	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	13	junction_9	134.599591381252	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6999	False	NA	-6	True	AATAAA	-19	NA	88818847	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
ES.29007.24	chr6	-	2957	4	NIC	ENSMUSG00000030083.12	novel	783	8	NA	NA	-195	-2	intron_retention	FALSE	canonical	1	1	junction_3	181.580713611208	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	9080	False	NA	-6	True	AATAAA	-19	NA	88816766	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815461_88815619_88815739_88815826_88815944_88816608
ES.29007.25	chr6	-	4937	3	NIC	ENSMUSG00000030083.12	novel	4556	6	NA	NA	3	-2	intron_retention	FALSE	canonical	3	163	junction_2	115	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGCCTGTTGTTGGG	6985	False	NA	-6	True	AATAAA	-19	NA	88818861	88812897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815461_88815619_88817883_88818750
ES.29007.27	chr6	-	1908	12	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	139.513321737205	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGAGCCTGTTGTTGG	6891	False	NA	-7	True	AATAAA	-18	NA	88818955	88812898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815626_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.28	chr6	-	3569	8	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	7	-3	intron_retention	FALSE	canonical	3	13	junction_6	127.345103989922	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGAGCCTGTTGTTGG	6989	False	NA	-7	True	AATAAA	-18	NA	88818857	88812898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815268_88815361_88815461_88815619_88815739_88815826_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
ES.29007.30	chr6	-	1664	7	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	103	-4	intron_retention	FALSE	canonical	3	333	junction_3	29.5319977124625	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	9378	False	NA	-8	True	AATAAA	-17	NA	88816468	88812899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88816213_88816312
ES.29007.31	chr6	-	5024	6	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-1	-4	intron_retention	TRUE	canonical	0	0	junction_5	155.231955473092	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	6963	False	NA	-8	True	AATAAA	-17	NA	88818883	88812899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816608
ES.29007.32	chr6	-	1764	12	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	138.697363629183	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	6984	False	NA	-8	True	AATAAA	-17	NA	88818862	88812899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815682_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.33	chr6	-	2988	4	NIC	ENSMUSG00000030083.12	novel	4556	6	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	333	junction_2	30.5068298363935	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	9705	False	NA	-8	True	AATAAA	-17	NA	88816141	88812899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88815268_88815361_88815739_88815826
ES.29007.34	chr6	-	1357	8	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	100	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	140.008017263152	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCTGAGCCTGTTGTTG	9375	False	NA	-8	True	AATAAA	-17	NA	88816471	88812899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813593_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
ES.29007.35	chr6	-	2868	7	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	10	5	intron_retention	FALSE	canonical	3	10	junction_4	146.758777893824	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGACCTGAGCCTGTTGTT	9285	False	NA	-9	True	AATAAA	-16	NA	88816561	88812900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813506_88815268_88815361_88815461_88815619_88815682_88815826_88815944_88816166_88816213_88816312
ES.29007.37	chr6	-	1252	7	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	89	4	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	133.424968511228	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACCTGAGCCTGTTGT	9364	False	NA	-10	True	AATAAA	-15	NA	88816482	88812901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
ES.29007.38	chr6	-	2893	7	NIC	ENSMUSG00000030083.12	novel	1774	12	NA	NA	19	2	intron_retention	FALSE	canonical	2	5	junction_2	149.70526599511	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGACCTGAGCCTGTT	9294	False	NA	-12	True	AATAAA	-13	NA	88816552	88812903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88815248_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
ES.29007.39	chr6	-	1862	12	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-319	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	137.123941040985	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGACCTGAGCCTGTT	6561	False	NA	-12	True	AATAAA	-13	NA	88819285	88812903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88819128
ES.29007.4	chr6	-	2522	12	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-455	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	135.668896902632	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6425	False	NA	-5	True	AATAAA	-20	NA	88819421	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816027_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.40	chr6	-	3225	5	ISM	ENSMUSG00000030083.12	ENSMUST00000203272.3	4556	6	2425	-226	30	2	3prime_fragment	FALSE	canonical	3	333	junction_2	27.8028775489157	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGACCTGAGCCTGTT	9305	False	NA	-12	True	AATAAA	-13	NA	88816541	88812903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_88813435_88813506_88815268_88815361_88815461_88815619_88815739_88815826
ES.29007.41	chr6	-	3265	10	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	139	junction_8	112.305139884355	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGACCTGAGCCTGT	6999	False	NA	-13	True	AATAAA	-12	NA	88818847	88812904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.5	chr6	-	1930	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	-86	1	-2	-1	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6878	False	NA	-5	True	AATAAA	-20	NA	88818968	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ES.29007.6	chr6	-	3174	6	NIC	ENSMUSG00000030083.12	novel	1774	12	NA	NA	-32	-1	intron_retention	FALSE	canonical	2	5	junction_2	158.873031065691	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	9243	False	NA	-5	True	AATAAA	-20	NA	88816603	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88815248_88815361_88815461_88815619_88815739_88815826_88816213_88816312
ES.29007.7	chr6	-	1730	12	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	-200	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	160.292501229512	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	6680	False	NA	-5	True	AATAAA	-20	NA	88819166	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813506_88813708_88815099_88815248_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88819128
ES.29007.8	chr6	-	3249	5	NIC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	7	-1	intron_retention	FALSE	canonical	3	379	junction_3	16.3324829710611	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	9282	False	NA	-5	True	AATAAA	-20	NA	88816564	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88813435_88813506_88815461_88815619_88815739_88815826_88816213_88816312
ES.29007.9	chr6	-	1515	8	NNC	ENSMUSG00000030083.12	novel	1845	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.692891774668	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	9282	False	NA	-5	True	AATAAA	-20	NA	88816564	88812896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88813435_88813531_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
ES.29008.1	chr6	+	159	2	Intergenic	novelGene_24098	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4194	False	NA	NA	False	NA	NA	NA	88839465	88924770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88839537_88924682
ES.29008.10	chr6	+	1969	10	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	9	-19	intron_retention	FALSE	canonical	3	57	junction_1	19.4193488848393	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879289	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887384_88887529_88887860_88888664
ES.29008.11	chr6	+	2044	10	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	9	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	36.4325861466536	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879289	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887860_88888664
ES.29008.12	chr6	+	1830	11	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-8	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	34.5405558727708	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879290	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.13	chr6	+	2848	9	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-8	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	38.6029467787111	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879290	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322
ES.29008.14	chr6	+	2702	10	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-8	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	36.3973272658689	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879290	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529
ES.29008.15	chr6	+	1767	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	-24	-5	-8	-2	multi-exon	FALSE	canonical	3	57	junction_1	17.59319928714	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTGATGCCTTTCAG	NA	False	NA	17	True	AATAAA	-19	NA	88879290	88889218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.16	chr6	+	1892	9	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	2	-19	intron_retention	FALSE	canonical	3	11	junction_3	37.0059116898908	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879300	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887860_88888664
ES.29008.17	chr6	+	2883	4	NNC	ENSMUSG00000002871.15	novel	742	7	NA	NA	2	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	54.6829244117597	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879300	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88886271_88886743_88887132
ES.29008.18	chr6	+	4128	5	NNC	ENSMUSG00000002871.15	novel	742	7	NA	NA	6	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	51.5333629797241	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879304	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88886563_88886662_88886743_88887132
ES.29008.19	chr6	+	2904	8	NNC	ENSMUSG00000002871.15	novel	1152	9	NA	NA	6	-28	intron_retention	FALSE	non_canonical	0	0	junction_1	41.1493050502976	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATTTTTTAATAAAAATAA	NA	False	NA	-16	True	NA	NA	NA	88879304	88889185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132
ES.29008.2	chr6	+	159	2	Intergenic	novelGene_24099	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4194	False	NA	NA	False	NA	NA	NA	88839465	88924770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88839525_88924670
ES.29008.20	chr6	+	1883	11	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	6	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	34.6329323043834	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879304	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887633_88887778_88887860_88888664
ES.29008.21	chr6	+	2132	9	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	38.5160275080388	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCTGATGCCTTTCAG	NA	False	NA	17	True	AATAAA	-19	NA	88879304	88889218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887860_88888664
ES.29008.22	chr6	+	1681	12	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-1	-19	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	33.4984889260781	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879322	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887352_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.23	chr6	+	5961	4	NNC	ENSMUSG00000002871.15	novel	742	7	NA	NA	0	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	53.7649204097492	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879333	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88886563_88886662_88886743_88887132
ES.29008.24	chr6	+	1717	10	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	6	-19	intron_retention	TRUE	non_canonical	0	0	junction_1	47.3403750630591	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879339	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885057_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887633_88887778_88887860_88888664
ES.29008.25	chr6	+	2095	12	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	10	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	48.3196997965607	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879343	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884557_88884809_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887860_88888664
ES.29008.26	chr6	+	1811	9	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-46	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	47.3429971062247	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAATAAAAAGAGTA	NA	False	NA	-8	True	NA	NA	NA	88879388	88889193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887860_88888664
ES.29008.27	chr6	+	2863	7	NNC	ENSMUSG00000002871.15	novel	1152	9	NA	NA	49	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	43.7432534480715	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879483	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882924_88883061_88884922_88885055_88885165_88885299_88886271_88886563_88886662_88886743_88887132
ES.29008.29	chr6	+	4200	12	NNC	ENSMUSG00000002871.15	novel	1718	12	NA	NA	703	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.0236579359567	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88880137	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88882809_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.3	chr6	+	4969	1	Antisense	novelGene_ENSMUSG00000002870.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTTAAAGAAATGACCC	NA	False	NA	NA	False	AATGAA	-29	NA	88868069	88873038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_88868100_88873000
ES.29008.30	chr6	+	1262	9	ISM	ENSMUSG00000002871.15	ENSMUST00000203185.3	1718	12	2235	19	-7	-19	3prime_fragment	FALSE	canonical	3	96	junction_8	7.39826837847885	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88885162	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.4	chr6	+	1793	12	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	16	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.0236579359567	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879248	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ES.29008.5	chr6	+	2082	8	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	17	-19	intron_retention	TRUE	non_canonical	0	0	junction_1	48.9456174686535	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879249	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88886271_88886563_88886662_88886743_88887132_88887244_88887322_88887860_88888664
ES.29008.6	chr6	+	2073	10	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	20	-19	intron_retention	FALSE	canonical	3	57	junction_1	19.3160842592672	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879252	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887860_88888664
ES.29008.7	chr6	+	2152	7	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-22	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	51.4651985973693	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879258	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88886271_88886563_88886662_88886743_88887132_88887860_88888664
ES.29008.8	chr6	+	1702	11	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-22	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.6028026025271	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879258	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88888664
ES.29008.9	chr6	+	2033	13	NNC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	-21	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.8807589054993	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	False	NA	-7	True	NA	NA	NA	88879259	88889194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_88879513_88882922_88883061_88884557_88884809_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ES.29009.1	chr6	-	6043	17	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-23	3120	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	887.332253073081	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTTTGTTTTCTTA	NA	False	NA	2	True	TTTAAA	-7	NA	88875706	88857335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88857715_88858106_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.101	chr6	-	4802	13	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	1002.1651837674	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875654	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88864056_88864482_88864953_88865153_88865248_88865995_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870498_88874268_88874499_88875626
ES.29009.102	chr6	-	4139	11	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	2616	junction_6	232.749672395043	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	4875	False	NA	-5	True	AATAAA	-14	NA	88870169	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88866905_88868654_88868863_88868957_88869178_88869926
ES.29009.103	chr6	-	3256	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	912.863002986879	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875655	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863072_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.105	chr6	-	3185	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	912.218238995228	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875661	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861746_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.107	chr6	-	4750	6	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	1890	-3	intron_retention	FALSE	canonical	3	2616	junction_5	270.304272996192	2851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCCCTTTGGTTCTGGTT	8037	False	NA	-6	True	AATAAA	-13	NA	88867007	88860458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88863078_88863942_88864056_88864482_88864610_88864701
ES.29009.11	chr6	-	5121	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	98	-1848	-5	1848	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGCGTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	88875664	88858607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.110	chr6	-	3269	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	902.097053167415	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCCCTTTGGTTCTGGTT	NA	False	NA	-6	True	AATAAA	-13	NA	88875661	88860458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870313_88870496_88874268_88874499_88875626
ES.29009.113	chr6	-	3091	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	835.61044837207	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCCCTTTGGTTCTGGTT	NA	False	NA	-6	True	AATAAA	-13	NA	88875660	88860458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864960_88866083_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.114	chr6	-	3230	17	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	889.404997737251	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATCCCTTTGGTTCTGGT	NA	False	NA	-7	True	AATAAA	-12	NA	88875681	88860459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88860554_88860609_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.117	chr6	-	3692	13	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-4	intron_retention	FALSE	canonical	1	1040	junction_6	624.983577562021	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATCCCTTTGGTTCTGGT	NA	False	NA	-7	True	AATAAA	-12	NA	88875662	88860459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870496_88874268_88874499_88875626
ES.29009.118	chr6	-	4145	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	2229	junction_13	315.282178486203	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATCCCTTTGGTTCTGGT	NA	False	NA	-7	True	AATAAA	-12	NA	88875660	88860459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870496_88874268_88874499_88875626
ES.29009.119	chr6	-	3089	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	45	237	-34	-237	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTCTGGACTGTTT	NA	False	NA	0	True	NA	NA	NA	88875717	88860692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.12	chr6	-	3957	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	92	-678	0	678	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGGCTTTGCGGATA	NA	False	NA	NA	False	TATAAA	-17	NA	88875670	88859777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.120	chr6	-	3122	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-237	intron_retention	FALSE	canonical	1	27	junction_12	928.28842940288	2850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTCTGGACTGTTT	NA	False	NA	0	True	NA	NA	NA	88875662	88860692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870319_88870496_88874268_88874499_88875626
ES.29009.121	chr6	-	3011	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-5	-237	at_least_one_novel_splicesite	FALSE	canonical	1	51	junction_10	907.644560876607	2850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTTTCTGGACTGTTT	NA	False	NA	0	True	NA	NA	NA	88875675	88860692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866869_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.125	chr6	-	3361	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-14	-238	intron_retention	FALSE	canonical	1	1040	junction_6	614.16853882533	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTTTCTGGACTGTT	NA	False	NA	-1	True	NA	NA	NA	88875697	88860693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.126	chr6	-	2911	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	918.038972786861	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTTTCTGGACTGTT	NA	False	NA	-1	True	NA	NA	NA	88875654	88860693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864828_88865142_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.129	chr6	-	3858	14	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	6	-240	intron_retention	FALSE	canonical	3	27	junction_11	845.523975354577	2850	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTTTCTGGACTG	NA	False	NA	-3	True	NA	NA	NA	88875653	88860695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870319_88870496_88874268_88874499_88875626
ES.29009.130	chr6	-	3144	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-241	intron_retention	FALSE	canonical	1	1040	junction_8	589.21388306794	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGTGTTTCTGGACT	NA	False	NA	-4	True	NA	NA	NA	88875681	88860696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.138	chr6	-	2969	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	56	346	-23	-346	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTAGAGCACTCTTCT	NA	False	NA	-7	True	ATTAAA	-21	NA	88875706	88860801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.139	chr6	-	3117	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-348	intron_retention	FALSE	canonical	1	47	junction_13	925.317617835925	2846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCTCTAGAGCACTCTT	NA	False	NA	-9	True	ATTAAA	-19	NA	88875657	88860803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870494_88874268_88874499_88875626
ES.29009.14	chr6	-	3377	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	100	-106	-3	106	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGATGTGTCCTGTAC	NA	False	NA	NA	False	AATGAA	-21	NA	88875662	88860349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.142	chr6	-	1334	7	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1172.42734908773	2846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCCCTCTAGAGCACTC	NA	False	NA	-11	True	ATTAAA	-17	NA	88875661	88860805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861010_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.143	chr6	-	4866	13	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-352	intron_retention	FALSE	canonical	3	2229	junction_12	336.126340334504	2846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCCCCCTCTAGAGCAC	NA	False	NA	-13	True	ATTAAA	-15	NA	88875681	88860807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88863078_88863942_88864056_88864482_88864610_88864701_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.16	chr6	-	3378	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	-4	-3	-4	3	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTTCTGGTTTAATGT	NA	False	NA	0	True	AATAAA	-19	NA	88875766	88860452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.17	chr6	-	5797	12	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-5	2	intron_retention	FALSE	canonical	1	1040	junction_6	665.411287714735	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTTCTGGTTTAATG	NA	False	NA	-1	True	AATAAA	-18	NA	88875675	88860453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866905_88868654_88868863_88868957_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.22	chr6	-	4768	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2229	junction_13	327.738674942788	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875662	88860455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.23	chr6	-	4129	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2229	junction_13	311.859094263028	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875681	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.24	chr6	-	3233	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1096.25196617079	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875642	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870332_88870496_88874272_88874499_88875626
ES.29009.25	chr6	-	3340	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	51	junction_10	907.644560876607	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875768	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866869_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.26	chr6	-	3030	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	950.117245718782	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875662	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88865142_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.29	chr6	-	3175	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	918.038972786861	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875681	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864828_88865142_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.3	chr6	-	6382	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	109	-3120	6	3120	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTTTGTTTTCTTA	NA	False	NA	2	True	TTTAAA	-7	NA	88875653	88857335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.31	chr6	-	4326	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	23	-1	intron_retention	FALSE	canonical	1	1040	junction_7	590.847026889087	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875739	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.32	chr6	-	4149	13	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	1160	-1	intron_retention	FALSE	canonical	1	51	junction_9	1004.50989984613	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	545	False	NA	-4	True	AATAAA	-15	NA	88874499	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866869_88868654_88868863_88868957_88870188_88870319_88870496_88874268
ES.29009.34	chr6	-	3358	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	4	-1	intron_retention	FALSE	canonical	1	1040	junction_8	589.21388306794	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875655	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.37	chr6	-	3579	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	1040	junction_7	611.358318895589	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875675	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.39	chr6	-	4446	14	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	27	junction_11	950.641334439841	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875662	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870319_88870496_88874268_88874499_88875626
ES.29009.41	chr6	-	3097	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	835.61044837207	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875661	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88866073_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.43	chr6	-	3144	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	948.793358289725	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875671	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.46	chr6	-	3269	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	904.031798850756	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875654	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874261_88874499_88875626
ES.29009.47	chr6	-	3159	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	1160	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	941.702802569551	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	545	False	NA	-4	True	AATAAA	-15	NA	88874499	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869102_88869926_88870188_88870319_88870496_88874268
ES.29009.48	chr6	-	3054	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	1152.70896773024	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875654	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869200_88869926_88870188_88870319_88870496_88875626
ES.29009.49	chr6	-	3262	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	902.097053167415	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875661	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870181_88870319_88870496_88874268_88874499_88875626
ES.29009.50	chr6	-	1776	8	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1132.0587891275	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875662	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861400_88868687_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.56	chr6	-	4019	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1040	junction_8	596.138406747963	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875662	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.57	chr6	-	3272	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_7	911.061466398154	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875724	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864893_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.58	chr6	-	3403	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	910.542636746536	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875623	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875454
ES.29009.59	chr6	-	3370	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1124.83609867789	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875751	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865000_88865153_88865248_88865995_88866188_88866769_88866869_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.60	chr6	-	4072	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	2229	junction_14	318.146802207883	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875716	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.61	chr6	-	3396	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_3	1253.04209382163	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGGTTCTGGTTTA	NA	False	NA	-4	True	AATAAA	-15	NA	88875654	88860456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862081_88862128_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870319_88870496_88874268_88874499_88875626
ES.29009.64	chr6	-	3271	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	902.097053167415	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875654	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870198_88870319_88870496_88874268_88874499_88875626
ES.29009.65	chr6	-	3863	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	1040	junction_8	594.9650006856	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875674	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.7	chr6	-	7227	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	3117	intron_retention	FALSE	canonical	3	2229	junction_13	311.859094263028	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTACTTTTGTTTTC	NA	False	NA	-1	True	TTTAAA	-45	NA	88875661	88857338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.70	chr6	-	3240	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	918.038972786861	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875653	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864933_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.71	chr6	-	3212	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1118.97519781867	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875654	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864490_88864565_88864697_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.73	chr6	-	3370	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1040	junction_7	592.233062231416	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875671	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.74	chr6	-	4241	13	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1040	junction_7	625.118716502891	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875661	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88870496_88874268_88874499_88875626
ES.29009.75	chr6	-	4297	13	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	10	-2	intron_retention	FALSE	canonical	3	2229	junction_12	317.75762732344	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875649	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.78	chr6	-	3560	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1040	junction_6	614.16853882533	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875660	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.79	chr6	-	3532	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	38	-2	intron_retention	FALSE	canonical	1	1040	junction_7	595.900900027061	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875724	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.8	chr6	-	4493	13	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	55	1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	981.950818382582	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTGTGTCTTTTTTCTCT	4932	False	NA	NA	False	NA	NA	NA	88870112	88858602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864828_88865142_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926
ES.29009.83	chr6	-	3261	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1108.37392406875	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875664	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869934_88870188_88870319_88870494_88874268_88874499_88875626
ES.29009.84	chr6	-	3256	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	918.397154467136	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875661	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864598_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.85	chr6	-	3249	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	912.863002986879	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875660	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863087_88863969_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.87	chr6	-	4232	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	2229	junction_13	325.519793706427	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875676	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.88	chr6	-	3382	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	16	-2	intron_retention	FALSE	canonical	1	1040	junction_8	581.753897226977	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875643	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870496_88874268_88874499_88875626
ES.29009.89	chr6	-	3256	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	918.038972786861	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875654	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864945_88865150_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.90	chr6	-	2031	10	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1014.73723412566	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875660	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864014_88869144_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.94	chr6	-	3262	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	1160	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	942.112760810315	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	545	False	NA	-5	True	AATAAA	-14	NA	88874499	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864638_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268
ES.29009.95	chr6	-	3249	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	908.589196991076	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875661	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868844_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.96	chr6	-	3247	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	912.218238995228	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875655	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861678_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ES.29009.98	chr6	-	4123	15	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	4	-2	intron_retention	FALSE	canonical	1	27	junction_12	920.840811986745	2852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	False	NA	-5	True	AATAAA	-14	NA	88875655	88860457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870184_88870319_88870496_88874268_88874499_88875626
ES.2901.1	chr10	-	833	2	Intergenic	novelGene_2227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	61484264	61483099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61483308_61483639
ES.29010.1	chr6	-	171	1	Intergenic	novelGene_24100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	88941770	88941599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_88941600_88941800
ES.29011.1	chr6	+	1334	1	Intergenic	novelGene_24101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAATGTGGAGTTACCAG	NA	False	NA	NA	False	NA	NA	NA	88999344	89000678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_88999300_89000700
ES.29012.1	chr6	+	2586	6	NNC	ENSMUSG00000055403.14	novel	522	5	NA	NA	51	11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	5.76194411635517	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTTGTAAAATT	NA	False	NA	NA	False	AATAAA	-26	NA	89073142	89087024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_89073217_89075553_89075616_89076410_89076510_89078495_89078565_89084649_89085555_89085647
ES.29012.2	chr6	+	4052	3	NNC	ENSMUSG00000055403.14	novel	2620	4	NA	NA	-1221	0	intron_retention	FALSE	non_canonical	0	0	junction_2	5.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGTACAAAATTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	89076778	89087013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_89078565_89084649_89085540_89085637
ES.29013.1	chr6	-	4066	1	Antisense	novelGene_ENSMUSG00000055403.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAGACGAAAG	NA	False	NA	NA	False	NA	NA	NA	89077770	89073704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_89073700_89077800
ES.29014.1	chr6	-	1699	2	FSM	ENSMUSG00000090013.2	ENSMUST00000159767.2	652	2	-1	-1046	-1	1046	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGTCTCATTTCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	89163008	89160607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_89162143_89162844
ES.29015.1	chr6	-	2201	2	NNC	ENSMUSG00000107622.2	novel	421	2	NA	NA	-1183	225	intron_retention	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTAATTCTATCAAAGAT	9337	False	NA	NA	False	AATAAA	-24	NA	89263890	89261407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89263569_89263850
ES.29016.1	chr6	-	4624	1	Genic_Genomic	ENSMUSG00000030084.12	novel	NA	NA	NA	NA	804	652	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAATGTAATCACCATAAA	NA	False	NA	NA	False	NA	NA	NA	89297267	89292643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_89292600_89297300
ES.29016.10	chr6	-	9029	32	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	33.9876331796895	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8990	False	NA	-1	True	AATAAA	-36	NA	89339602	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319316_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.12	chr6	-	8985	32	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	33.7452351436635	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8974	False	NA	-1	True	AATAAA	-36	NA	89339618	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299838_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.16	chr6	-	6239	18	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	-1631	-2	intron_retention	FALSE	canonical	3	128	junction_17	17.3424694226267	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCGTGGCTCTGAGTC	6296	False	NA	-4	True	AATAAA	-33	NA	89311683	89293297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632
ES.29016.17	chr6	-	8869	31	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	43.774231384838	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCGTGGCTCTGAGTC	8992	False	NA	-4	True	AATAAA	-33	NA	89339600	89293297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299838_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311990_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.18	chr6	-	5108	4	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	-1686	-2	intron_retention	FALSE	canonical	3	173	junction_2	11.0855260988773	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCGTGGCTCTGAGTC	NA	False	NA	-4	True	AATAAA	-33	NA	89299757	89293297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89299595_89299712
ES.29016.2	chr6	-	8898	31	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_28	34.7568698245397	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGAGTCTTAGTGGGA	8992	False	NA	5	True	AATAAA	-42	NA	89339600	89293288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89331837_89332021_89333439_89334701_89339388
ES.29016.21	chr6	-	8997	32	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.3647267308827	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAAGCTCGTGGCTCTGA	9018	False	NA	-7	True	AATAAA	-30	NA	89339574	89293300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300649_89301228_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.23	chr6	-	8929	32	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	34.446477809883	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGCTCGTGGCTCTG	9026	False	NA	-8	True	AATAAA	-29	NA	89339566	89293301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311695_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.24	chr6	-	7583	30	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_29	34.357669666651	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGCTCGTGGCTCTG	8991	False	NA	-8	True	AATAAA	-29	NA	89339601	89293301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89339388
ES.29016.26	chr6	-	7343	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	4	1687	4	1014	multi-exon	FALSE	canonical	3	115	junction_30	20.9222334925891	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAATGTTTTTTTTTTA	8994	False	NA	NA	False	NA	NA	NA	89339598	89294982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.27	chr6	-	3279	14	ISM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	30643	1951	1093	750	3prime_fragment	FALSE	canonical	3	152	junction_12	13.7143297407014	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTGCTGTACAATTATT	9020	False	NA	NA	False	NA	NA	NA	89308959	89295246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822
ES.29016.28	chr6	-	5663	29	ISM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	57	5921	57	280	5prime_fragment	FALSE	canonical	3	115	junction_27	21.1265320661688	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCTGTGTTCAGAGAG	9047	False	NA	NA	False	NA	NA	NA	89339545	89299216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.29	chr6	-	5525	23	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	1	-2025	intron_retention	FALSE	canonical	3	115	junction_21	19.0773220048316	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCACCCACTCCCCT	8991	False	NA	NA	False	NA	NA	NA	89339601	89301521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89301669_89306365_89306433_89306539_89306797_89307317_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.3	chr6	-	9066	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	-30	-2	-30	2	multi-exon	FALSE	canonical	3	115	junction_30	20.9222334925891	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGCTCTGAGTCTTAG	8960	False	NA	0	True	AATAAA	-37	NA	89339632	89293293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.4	chr6	-	9029	32	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	33.1291421928634	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8990	False	NA	-1	True	AATAAA	-36	NA	89339602	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306791_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.5	chr6	-	8808	31	NIC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	35.1979166050113	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8977	False	NA	-1	True	AATAAA	-36	NA	89339615	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.6	chr6	-	9127	32	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	34.3837073921219	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	8991	False	NA	-1	True	AATAAA	-36	NA	89339601	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306890_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.7	chr6	-	8895	33	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	11	1	intron_retention	FALSE	non_canonical	0	0	junction_1	34.1733717379117	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	9001	False	NA	-1	True	AATAAA	-36	NA	89339591	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89294437_89294565_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29016.8	chr6	-	4110	10	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	-30	1	intron_retention	FALSE	non_canonical	0	0	junction_1	73.3350168156933	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	NA	False	NA	-1	True	AATAAA	-36	NA	89301645	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89295521_89295713_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299838_89300217_89300315_89300555_89300660_89301235_89301396_89301521
ES.29016.9	chr6	-	8474	33	NNC	ENSMUSG00000030084.12	novel	9034	32	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.1733717379117	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	9006	False	NA	-1	True	AATAAA	-36	NA	89339586	89293294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_89293574_89294118_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ES.29017.1	chr6	-	1129	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	5	-13	5	8	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTTGACTCTTTGTC	NA	False	NA	8	True	AATAAA	-45	NA	89572629	89360119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ES.29017.2	chr6	-	1012	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	16	14	16	-9	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTCATTGGCACCCAG	NA	False	NA	-14	True	AATAAA	-23	NA	89572618	89360141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ES.29017.3	chr6	-	3868	1	Intergenic	novelGene_24102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTAAGGGT	3978	False	NA	NA	False	NA	NA	NA	89411941	89408073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_89408100_89411900
ES.29018.1	chr6	+	7770	14	NIC	ENSMUSG00000000811.15	novel	2836	16	NA	NA	-32	-85	intron_retention	FALSE	canonical	3	54	junction_8	10.1765480482094	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGATCTAATTCGTT	NA	False	NA	6	True	ATTAAA	-17	NA	89620937	89652426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89640175_89641359_89641586_89642681_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ES.29018.2	chr6	+	2780	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	-29	85	-29	-85	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGATCTAATTCGTT	NA	False	NA	6	True	ATTAAA	-17	NA	89620940	89652426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ES.29018.3	chr6	+	4236	15	NIC	ENSMUSG00000000811.15	novel	2836	16	NA	NA	-10	-85	intron_retention	FALSE	canonical	3	51	junction_9	10.7152380529138	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGATCTAATTCGTT	NA	False	NA	6	True	ATTAAA	-17	NA	89620959	89652426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ES.29018.4	chr6	+	3937	15	NIC	ENSMUSG00000000811.15	novel	2836	16	NA	NA	-3	-87	intron_retention	FALSE	canonical	3	51	junction_9	10.8543229420638	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGTGATCTAATTCG	NA	False	NA	4	True	ATTAAA	-15	NA	89620966	89652424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ES.29018.6	chr6	+	1824	7	ISM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	21266	89	21266	-89	3prime_fragment	FALSE	canonical	3	51	junction_1	9.9666109251507	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTGTGTGATCTAATT	NA	False	NA	2	True	ATTAAA	-13	NA	89642235	89652422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ES.29019.1	chr6	-	837	1	Antisense	novelGene_ENSMUSG00000000811.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCAATTCAGTTTCAAT	NA	False	NA	NA	False	AATAAA	-7	NA	89621372	89620535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_89620500_89621400
ES.2902.1	chr10	-	208	1	Intergenic	novelGene_2228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTATATAGTGAGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	61486384	61486176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61486200_61486400
ES.29020.1	chr6	-	5378	1	Intergenic	novelGene_24103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTCCTGTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	89805511	89800133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_89800100_89805500
ES.29020.2	chr6	-	2038	2	Intergenic	novelGene_24104	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGATCTTGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	89803475	89800140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_89801155_89802451
ES.29021.1	chr6	-	1539	4	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	4	1094	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGTGTCATATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	90209795	90107328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90108453_90150161_90150315_90202364_90202500_90209668
ES.29021.2	chr6	-	1687	4	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	4	-21251	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTATGCTCTTATTCAA	NA	False	NA	NA	False	AATAAA	-15	NA	90209795	90129673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90130950_90150161_90150315_90202364_90202496_90209668
ES.29021.4	chr6	-	1793	5	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	-12	-21252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22474487139159	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTATGCTCTTATTCA	NA	False	NA	NA	False	AATAAA	-14	NA	90209811	90129674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90130950_90150161_90150315_90201262_90201354_90202364_90202496_90209668
ES.29021.5	chr6	-	4784	4	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	2	25156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.24721912892465	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAGTGGAGCATGTG	NA	False	NA	NA	False	NA	NA	NA	90209797	90183553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90183924_90197153_90201354_90202364_90202450_90209668
ES.29021.6	chr6	-	923	4	NNC	ENSMUSG00000092247.3	novel	399	4	NA	NA	3	8506	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.471404520791032	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTCTTAGATATCTCA	NA	False	NA	NA	False	TATAAA	-11	NA	90209796	90200203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90200748_90201237_90201354_90202364_90202500_90209668
ES.29022.1	chr6	+	2110	2	Genic_Genomic	ENSMUSG00000092552.2	novel	585	1	NA	NA	-2774	781	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTGCCTTTGATGTA	NA	False	NA	NA	False	AGTAAA	-19	NA	90209896	90214036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_90210643_90212672
ES.29023.1	chr6	-	3086	3	FSM	ENSMUSG00000056643.6	ENSMUST00000070890.6	1653	3	-28	-1405	-28	1405	multi-exon	FALSE	canonical	2	3	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTGGTCATCCAGCT	NA	False	NA	NA	False	NA	NA	NA	90302195	90283925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90286790_90295240_90295324_90302056
ES.29024.1	chr6	+	1628	3	NNC	ENSMUSG00000034456.16	novel	3370	20	NA	NA	27958	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAAAAGGAACCAGAC	4940	False	NA	NA	False	AATAAA	-10	NA	90338228	90341523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90338322_90338432_90338533_90340088
ES.29025.1	chr6	+	4198	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346457	90380472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
ES.29025.10	chr6	+	5743	9	NIC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	30	0	intron_retention	FALSE	canonical	3	55	junction_7	20.4171343483849	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346505	90380472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.11	chr6	+	4579	10	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	38	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.8956277452847	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAAAGCTTTTGCGCT	NA	False	NA	3	True	AATAAA	-16	NA	90346513	90380463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375243_90375914_90377763_90377866_90379001
ES.29025.12	chr6	+	4987	1	NIC	ENSMUSG00000034430.17	novel	4864	6	NA	NA	-45	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAGAAAAAAAAAATCTAG	NA	False	NA	NA	False	NA	NA	NA	90346544	90351531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90346500_90351500
ES.29025.13	chr6	+	2858	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	69	1199	-45	-1199	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTCCACAGGTTGC	NA	False	NA	NA	False	NA	NA	NA	90346544	90379273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.14	chr6	+	3074	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	72	980	-42	-980	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGAGTTGTAGTGTAT	NA	False	NA	NA	False	NA	NA	NA	90346547	90379492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.15	chr6	+	4666	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	76	122	-40	-122	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGTTTCCATGTATGC	NA	False	NA	NA	False	TTTAAA	-18	NA	90346549	90361944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29025.16	chr6	+	5268	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	78	-1220	-36	1220	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTCATCTGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	90346553	90381692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.17	chr6	+	3843	9	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	43.9282084770139	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCGCTGCTTT	NA	False	NA	8	True	AATAAA	-21	NA	90346585	90380468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90377763_90377867_90379001
ES.29025.19	chr6	+	2943	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	116	1805	0	176	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTACTGGAGCCGACTTG	NA	False	NA	NA	False	NA	NA	NA	90346589	90360261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29025.2	chr6	+	4671	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	-5	-540	-3	540	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACGTGCCGTGCTCCCCA	NA	False	NA	NA	False	AATAAA	-23	NA	90346470	90381012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.20	chr6	+	3925	9	NIC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	34.7092837004741	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346591	90380472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90375743_90375914_90377763_90377866_90379001
ES.29025.21	chr6	+	3656	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	0	-405	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGAGTTGCTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	90346594	90380067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
ES.29025.22	chr6	+	4830	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	122	-826	-2	826	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAACAGAGTTAAGCTG	NA	False	NA	NA	False	TATAAA	-28	NA	90346597	90381298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.24	chr6	+	4199	3	NIC	ENSMUSG00000034430.17	novel	4864	6	NA	NA	26	-110	intron_retention	FALSE	canonical	1	1	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGCCTCTCAGTGTCT	NA	False	NA	NA	False	TTTAAA	-30	NA	90346625	90361956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90347551_90350692_90350824_90358813
ES.29025.25	chr6	+	5502	1	FSM	ENSMUSG00000108181.2	ENSMUST00000203368.2	2551	1	-2930	-21	-2930	21	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTGCCTAATTACAACA	NA	False	NA	NA	False	AATAAA	-14	NA	90360858	90366360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90360900_90366400
ES.29025.3	chr6	+	4130	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	-2	-2	0	2	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCGCTGCTTTCATTCA	NA	False	NA	14	True	AATAAA	-27	NA	90346473	90380474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.4	chr6	+	2601	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	3	2260	1	-279	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTGAGGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	90346476	90359806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29025.5	chr6	+	3525	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	12	1327	10	-458	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGTTTTCTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	90346485	90360739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29025.6	chr6	+	3104	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	15	-1199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.6107308692985	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCTCCACAGGTTGC	NA	False	NA	NA	False	NA	NA	NA	90346490	90379273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90360211_90360404_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ES.29025.7	chr6	+	3929	9	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	41.4576214344238	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCGCTGCTTT	NA	False	NA	8	True	AATAAA	-21	NA	90346498	90380468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377867_90379001
ES.29025.8	chr6	+	4827	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	30	7	28	-7	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAATGTACTACATGCA	NA	False	NA	NA	False	AATAAA	-21	NA	90346503	90362059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29025.9	chr6	+	2855	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	31	1978	29	3	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGAGTCTGACTTTCC	NA	False	NA	NA	False	NA	NA	NA	90346504	90360088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ES.29026.1	chr6	+	3164	1	Antisense	novelGene_ENSMUSG00000048794.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTTTTAATGTTAATA	203	False	NA	NA	False	NA	NA	NA	90384716	90387880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_90384700_90387900
ES.29027.1	chr6	+	183	1	Intergenic	novelGene_24105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAAAGTGAGC	NA	False	NA	NA	False	NA	NA	NA	90395400	90395583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_90395400_90395600
ES.29028.1	chr6	-	2515	17	FSM	ENSMUSG00000048794.15	ENSMUST00000165673.5	2072	17	-431	-12	-47	10	multi-exon	FALSE	canonical	0	0	junction_6	1.79299853597263	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGTCTCTTGGAGCCC	NA	False	NA	NA	False	AATAAA	-34	NA	90405826	90380707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90380975_90382331_90382426_90382999_90383206_90383937_90384074_90386323_90386476_90386583_90386633_90389128_90389259_90389334_90389374_90389826_90390009_90390360_90390442_90390693_90390858_90390942_90391011_90392681_90392875_90394591_90394693_90396357_90396439_90404419_90404526_90405360
ES.29028.2	chr6	-	2133	15	NIC	ENSMUSG00000048794.15	novel	2072	17	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_5	1.75109295316161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGCCTGCTGAAGGGAGT	NA	False	NA	NA	False	AATAAA	-22	NA	90405429	90380719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90380975_90382331_90382426_90382999_90383206_90383937_90384074_90386323_90386633_90389128_90389259_90389334_90389374_90389826_90390009_90390360_90390442_90390693_90390858_90390942_90391011_90392681_90392875_90394591_90394693_90404419_90404526_90405360
ES.29029.1	chr6	+	4260	3	Fusion	ENSMUSG00000107451.2_ENSMUSG00000030087.12	novel	2240	2	NA	NA	-510	3	multi-exon	FALSE	canonical	2	5	junction_1	1.5	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTGTACAGAGTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	90439047	90456671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_90439196_90443401_90444506_90453663
ES.29029.10	chr6	+	4240	3	Fusion	ENSMUSG00000107451.2_ENSMUSG00000030087.12	novel	2373	3	NA	NA	21	2	multi-exon	FALSE	canonical	2	8	junction_2	179	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTGTACAGAGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	90439578	90456670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_90439708_90443401_90444506_90453663
ES.29029.11	chr6	+	2595	3	NNC	ENSMUSG00000030087.12	novel	2373	3	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439580	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90439708_90443150_90444506_90451101
ES.29029.12	chr6	+	5076	3	FSM	ENSMUSG00000030087.12	ENSMUST00000113530.4	2374	3	-2705	3	23	-3	multi-exon	FALSE	canonical	0	0	junction_1	176.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439580	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90442440_90443401_90444506_90451101
ES.29029.13	chr6	+	2345	4	NNC	ENSMUSG00000030087.12	novel	2482	4	NA	NA	25	60473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	169.553007116424	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAAAACTTTAGAGCC	NA	False	NA	NA	False	AATACA	-40	NA	90439582	90512693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90439708_90443401_90444506_90451101_90452201_90512676
ES.29029.14	chr6	+	2291	3	NNC	ENSMUSG00000030087.12	novel	2240	2	NA	NA	-1292	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.5	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAGGAAAAAAAA	NA	False	NA	-1	True	CATAAA	-19	NA	90440993	90452191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90441091_90443401_90444506_90451101
ES.29029.15	chr6	+	3657	2	Genic_Genomic	ENSMUSG00000107451.2	novel	1221	1	NA	NA	-2467	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTGTACAGAGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	90452980	90456670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_90456313_90456345
ES.29029.16	chr6	+	3111	23	Fusion	ENSMUSG00000108111.2_ENSMUSG00000030088.16	novel	653	5	NA	NA	-11	2	multi-exon	FALSE	canonical	0	0	junction_1	47.2324128797829	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCACTGCTCTGTC	738	False	NA	15	True	AATAAA	-25	NA	90463363	90576153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_90463514_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.17	chr6	+	628	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32388	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGTGTAATTATACAA	9342	False	NA	NA	False	AATACA	-18	NA	90495762	90496469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90495862_90495940
ES.29029.18	chr6	+	517	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32389	-103	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAATTGCCAACACTC	9343	False	NA	NA	False	NA	NA	NA	90495763	90496359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90495862_90495940
ES.29029.19	chr6	+	3064	23	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-10033	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2324128797829	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCGCCTACACTTTGT	NA	False	NA	1	True	AATAAA	-11	NA	90517737	90576139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90517855_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.2	chr6	+	2306	3	NNC	ENSMUSG00000030087.12	novel	2240	2	NA	NA	-451	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	174	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439106	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90439196_90443401_90444506_90451101
ES.29029.20	chr6	+	3563	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-509	-2	-493	2	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCACTGCTCTGTC	NA	False	NA	15	True	AATAAA	-25	NA	90527277	90576153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.21	chr6	+	3718	22	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-491	-1	intron_retention	FALSE	canonical	0	0	junction_18	59.5886503978386	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527279	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527359_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568602_90568882_90571464_90571631_90573849_90573956_90575167
ES.29029.22	chr6	+	3029	23	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-483	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	46.8789543786587	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527287	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527359_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.23	chr6	+	3073	23	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-483	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	47.0555544714072	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACACTTTGTGTCACTGCT	NA	False	NA	10	True	AATAAA	-20	NA	90527287	90576148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527405_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.24	chr6	+	3620	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	-479	1034	-479	0	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527291	90576151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.25	chr6	+	4984	22	NIC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	110	junction_1	30.9907454549721	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527743	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90527880_90534183_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.28	chr6	+	4762	21	ISM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	-9	12	7	-3	intron_retention	FALSE	canonical	3	110	junction_1	26.9615930538238	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCGCCTACACTTTGT	NA	False	NA	1	True	AATAAA	-11	NA	90527777	90576139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849
ES.29029.29	chr6	+	7763	22	NIC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	47	junction_1	40.1041727405243	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527780	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.3	chr6	+	2394	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	-27	6	-27	-3	multi-exon	FALSE	canonical	3	353	junction_2	6.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439530	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90439708_90443401_90444506_90451101
ES.29029.30	chr6	+	3122	23	NNC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_13	48.0462931035448	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527782	90576151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554700_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.32	chr6	+	3179	23	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	52.9695842866841	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGCCTACACTTTGTGT	NA	False	NA	3	True	AATAAA	-13	NA	90527787	90576141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575433_90575868
ES.29029.34	chr6	+	3106	23	NNC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_22	47.3583359449113	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527796	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575433_90575868
ES.29029.35	chr6	+	2831	22	NIC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	47.1723332573587	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527806	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575868
ES.29029.36	chr6	+	3060	22	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.0622904117828	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527811	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527953_90536223_90536459_90536807_90536974_90539600_90539703_90540235_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.37	chr6	+	3296	25	NNC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.9845871473396	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90527812	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90541809_90541953_90542315_90542444_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.39	chr6	+	2471	20	NIC	ENSMUSG00000030088.16	novel	3052	23	NA	NA	-10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.6383626049759	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTTGTGTCACTGCTC	NA	False	NA	11	True	AATAAA	-21	NA	90527814	90576149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90527880_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.4	chr6	+	2938	3	NNC	ENSMUSG00000030087.12	novel	2373	3	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	182.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439539	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90439708_90443401_90444506_90450548
ES.29029.41	chr6	+	4116	23	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	-1	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	55.0329728360512	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTCTCTGTGTTTG	NA	False	NA	NA	False	TTTAAA	-19	NA	90527828	90577187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568879_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.42	chr6	+	3037	23	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	6377	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	60.2703276637369	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90534206	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90555557_90555660_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.44	chr6	+	3531	21	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	7782	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.1201587945316	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90535611	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90536459_90536807_90536974_90539600_90539703_90540235_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.45	chr6	+	3024	22	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	7853	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.3352802798111	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACACTTTGTGTCACTG	NA	False	NA	8	True	AATAAA	-18	NA	90535682	90576146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90535903_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.46	chr6	+	2636	21	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-8160	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.5191882001311	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90536527	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90536591_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.47	chr6	+	2651	21	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-8128	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.5191882001311	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGTGTCACTGCTCT	NA	False	NA	12	True	AATAAA	-22	NA	90536559	90576150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90536638_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.48	chr6	+	3690	21	NNC	ENSMUSG00000030088.16	novel	653	5	NA	NA	-8060	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.5191882001311	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTCTCTGTGTT	NA	False	NA	NA	False	TTTAAA	-17	NA	90536627	90577185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90536710_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.5	chr6	+	8967	2	ISM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	-4	6	-4	-3	intron_retention	FALSE	canonical	3	366	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439553	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_90439708_90443401
ES.29029.50	chr6	+	1603	12	NNC	ENSMUSG00000030088.16	novel	4175	23	NA	NA	4037	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5044086450332	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCGCCTACACTTTGT	7914	False	NA	1	True	AATAAA	-11	NA	90548724	90576139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90548876_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ES.29029.6	chr6	+	2403	3	NIC	ENSMUSG00000030087.12	novel	2373	3	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	183	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTACCATTTTTTGGC	NA	False	NA	22	True	AATAAA	-18	NA	90439558	90452214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90439708_90443401_90444506_90451064
ES.29029.8	chr6	+	2212	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	18	143	18	-126	multi-exon	FALSE	canonical	3	353	junction_2	6.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTGACATTTGTGTAAAT	NA	False	NA	NA	False	AATAAA	-43	NA	90439575	90452077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90439708_90443401_90444506_90451101
ES.29029.9	chr6	+	8814	2	ISM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	18	137	18	-120	intron_retention	FALSE	canonical	3	366	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTGTAAATTTGAAA	NA	False	NA	NA	False	CATAAA	-22	NA	90439575	90452083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_90439708_90443401
ES.2903.1	chr10	-	2070	1	Antisense	novelGene_ENSMUSG00000020089.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGCCACAGGATGACA	NA	False	NA	NA	False	CATAAA	-2	NA	61495609	61493539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61493500_61495600
ES.29030.1	chr6	-	3780	1	FSM	ENSMUSG00000107605.2	ENSMUST00000204442.2	1758	1	-2022	0	-2022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGTTGTGTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	90440472	90436692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90436700_90440500
ES.29031.1	chr6	-	3878	2	Antisense	novelGene_ENSMUSG00000030088.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	90490233	90470258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_90474097_90490193
ES.29031.2	chr6	-	100	1	Intergenic	novelGene_24106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATAGTCTGCCAAATG	NA	False	NA	NA	False	NA	NA	NA	90490243	90490143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_90490100_90490200
ES.29032.1	chr6	+	2245	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	165	2	165	-2	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	90581871	90623392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ES.29032.2	chr6	+	2146	11	NNC	ENSMUSG00000030089.16	novel	2412	11	NA	NA	195	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.8333053221091	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	90581901	90623392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_90581991_90588860_90589095_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ES.29032.3	chr6	+	1293	5	NIC	ENSMUSG00000030089.16	novel	2324	10	NA	NA	16159	-2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	21.6145205822382	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGGTGTCCTCCATCCT	2811	False	NA	NA	False	AATAAA	-15	NA	90612287	90623392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90622550
ES.29032.4	chr6	+	2308	2	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	23619	4	23619	-4	3prime_fragment	FALSE	canonical	3	45	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCGGTGTCCTCCATC	374	False	NA	NA	False	AATAAA	-13	NA	90619747	90623390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_90621216_90622550
ES.29033.1	chr6	-	2943	1	Intergenic	novelGene_24107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCTTTATCGCGC	NA	False	NA	NA	False	NA	NA	NA	90632668	90629725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_90629700_90632700
ES.29034.1	chr6	+	9519	1	Intergenic	novelGene_24108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCCTTGCCAACAATA	NA	False	NA	NA	False	NA	NA	NA	90673619	90683138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_90673600_90683100
ES.29035.1	chr6	+	174	1	Intergenic	novelGene_24110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCATTTCTG	NA	False	NA	NA	False	NA	NA	NA	90860508	90860682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_90860500_90860700
ES.29036.1	chr6	+	233	1	Intergenic	novelGene_24112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTCACCCTCAACTGGG	NA	False	NA	NA	False	NA	NA	NA	90939273	90939506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_90939300_90939500
ES.29037.1	chr6	-	6362	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-115	2	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTCCCCAGCCGCCTG	2732	False	NA	-6	True	AATAAA	-19	NA	90713784	90636577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.10	chr6	-	10419	12	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-62	601	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	2785	False	NA	-1	True	AATACA	-21	NA	90713731	90637361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.12	chr6	-	5501	14	NNC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	138	598	intron_retention	FALSE	canonical	0	0	junction_9	16.2079679433318	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTTGGAGTGGTAACA	NA	False	NA	-4	True	AATACA	-18	NA	90693373	90637364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90654988_90655129_90657521_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.13	chr6	-	3975	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	124	673	intron_retention	FALSE	canonical	2	9	junction_13	9.75195322568645	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATAGGTAGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	90693387	90638936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.14	chr6	-	3712	12	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-146	666	intron_retention	FALSE	canonical	2	4	junction_1	11.3399753669183	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATACTGTATAGGTAG	NA	False	NA	NA	False	AGTAAA	-41	NA	90671824	90638943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540
ES.29037.15	chr6	-	3999	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-119	665	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACATACTGTATAGGTA	2728	False	NA	NA	False	AGTAAA	-40	NA	90713788	90638944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.16	chr6	-	6566	12	ISM	ENSMUSG00000034312.16	ENSMUST00000101153.10	8036	14	115	8179	115	-1455	5prime_fragment	FALSE	canonical	2	9	junction_11	10.0494644403167	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTTCGTTCACGCC	NA	False	NA	NA	False	TATAAA	-36	NA	90693396	90641248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.17	chr6	-	6531	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-77	-1471	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTCTCCCTTTTGCCA	2770	False	NA	NA	False	TATAAA	-20	NA	90713746	90641264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.18	chr6	-	3804	6	ISM	ENSMUSG00000034312.16	ENSMUST00000101153.10	8036	14	44520	8633	-3358	-1909	internal_fragment	FALSE	canonical	3	35	junction_5	5.88557558782486	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGTGCCTACAGTTGC	NA	False	NA	NA	False	CATAAA	-11	NA	90648991	90641702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961
ES.29037.19	chr6	-	3285	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-110	2847	intron_retention	FALSE	canonical	3	17	junction_11	8.08835506164917	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCCGCTGGGCCTTTTG	2737	False	NA	NA	False	AATGAA	-20	NA	90713779	90644543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.2	chr6	-	3399	1	FSM	ENSMUSG00000034312.16	ENSMUST00000204983.2	2691	1	-708	0	-708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTGTCCCCAGCCGCC	NA	False	NA	-8	True	AATAAA	-17	NA	90639978	90636579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90636600_90640000
ES.29037.20	chr6	-	3379	12	ISM	ENSMUSG00000034312.16	ENSMUST00000101153.10	8036	14	0	11481	0	2840	5prime_fragment	FALSE	canonical	2	9	junction_11	10.0494644403167	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTACTGAGCCGCTGGG	NA	False	NA	NA	False	AATGAA	-13	NA	90693511	90644550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.21	chr6	-	177	1	Intergenic	novelGene_24109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	1259	False	NA	NA	False	NA	NA	NA	90763044	90762867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_90762900_90763000
ES.29037.22	chr6	-	162	1	Intergenic	novelGene_24111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	90869412	90869250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_90869200_90869400
ES.29037.3	chr6	-	5623	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-110	651	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCTAGTGGTAAGTCA	2737	False	NA	49	True	ATTAAA	-29	NA	90713779	90637311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.4	chr6	-	5674	13	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	0	651	intron_retention	FALSE	canonical	2	4	junction_1	13.2748718344933	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGCTAGTGGTAAGTCA	NA	False	NA	49	True	ATTAAA	-29	NA	90693511	90637311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.5	chr6	-	6203	16	NIC	ENSMUSG00000034312.16	novel	3500	16	NA	NA	-124	649	intron_retention	FALSE	canonical	0	0	junction_15	15.5626333104509	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGCTAGTGGTAAGT	NA	False	NA	47	True	ATTAAA	-27	NA	90965791	90637313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90764099_90764145_90850421_90850452_90965063
ES.29037.6	chr6	-	6161	16	NNC	ENSMUSG00000034312.16	novel	3500	16	NA	NA	22	643	intron_retention	FALSE	canonical	0	0	junction_12	18.7047231112002	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTCTCTGAGCTAGTG	NA	False	NA	41	True	ATTAAA	-21	NA	90965645	90637319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90760124_90760285_90764099_90764145_90850421_90850452_90965063
ES.29037.7	chr6	-	5705	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	9	641	intron_retention	FALSE	canonical	2	9	junction_13	9.75195322568645	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTCTCTCTGAGCTAG	NA	False	NA	39	True	ATTAAA	-19	NA	90693502	90637321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29037.8	chr6	-	5492	13	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-79	601	intron_retention	FALSE	canonical	2	4	junction_1	12.1380943040221	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	2768	False	NA	-1	True	AATACA	-21	NA	90713748	90637361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
ES.29037.9	chr6	-	10578	12	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	-10	601	intron_retention	FALSE	canonical	2	9	junction_11	10.0494644403167	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	NA	False	NA	-1	True	AATACA	-21	NA	90693521	90637361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ES.29038.1	chr6	-	7282	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	-242	-3	-242	3	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGTTCTTGGGGGTA	NA	False	NA	1	True	AATAAA	-23	NA	91094053	90990046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.10	chr6	-	5888	31	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-8514	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_16	81.8252134464405	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	4324	False	NA	-2	True	AATAAA	-20	NA	91051340	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229
ES.29038.11	chr6	-	7110	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_37	92.3015133949601	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093779	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91065862_91065968_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.13	chr6	-	6809	39	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.3523966869726	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093833	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991313_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.16	chr6	-	7587	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-1	0	intron_retention	FALSE	canonical	3	302	junction_33	45.5512557182228	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093779	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.17	chr6	-	7171	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	107.890442116065	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093808	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91065862_91065968_91066816_91066914_91075547_91075680_91078244_91078382_91093567
ES.29038.18	chr6	-	9779	39	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_26	94.5398426905592	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093777	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046541_91046681_91046749_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.2	chr6	-	6878	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.0066888868837	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGTTCTTGGGGGTA	NA	False	NA	1	True	AATAAA	-23	NA	91093810	90990046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90990390_90990550_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.21	chr6	-	7143	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.1125528594292	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093809	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91002545_91002654_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.22	chr6	-	7094	40	FSM	ENSMUSG00000030091.18	ENSMUST00000113509.2	6893	40	-199	-2	-189	0	multi-exon	FALSE	non_canonical	2	13	junction_25	73.2448632562406	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91094000	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037586_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.26	chr6	-	8419	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	8	0	intron_retention	FALSE	non_canonical	3	302	junction_33	44.9858395695007	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093793	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.27	chr6	-	8141	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-1	0	intron_retention	FALSE	non_canonical	3	302	junction_33	45.088801270382	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093802	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.28	chr6	-	6964	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	74.7511585207697	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093795	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032343_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.3	chr6	-	7500	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.6583695026053	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCGGTGGTTCTTGGGGGT	NA	False	NA	0	True	AATAAA	-22	NA	91093828	90990047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991869_90992751_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.31	chr6	-	9005	38	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_20	76.4133161613777	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093797	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030544_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.32	chr6	-	7203	42	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	119.526484959534	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093807	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91046681_91046749_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91065862_91065968_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.34	chr6	-	3945	17	NIC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	11261	0	intron_retention	FALSE	canonical	3	329	junction_11	44.9485817351338	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	4742	False	NA	-4	True	AATAAA	-18	NA	91019341	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236
ES.29038.35	chr6	-	6751	39	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.8034983668873	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093802	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995899_90998435_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.36	chr6	-	5855	10	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	-1448	0	intron_retention	FALSE	non_canonical	0	0	junction_1	136.35492901493	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91008688	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90992118_90992207_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603
ES.29038.37	chr6	-	6897	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_39	74.7293076912124	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093786	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093712
ES.29038.38	chr6	-	7031	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	74.7293076912124	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093775	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093567
ES.29038.4	chr6	-	8472	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_36	108.29677125398	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093801	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003786_91003962_91005707_91005884_91007065_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075224_91075353_91075547_91075680_91078244_91078382_91093599
ES.29038.40	chr6	-	6539	38	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	8754	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	95.9626936277741	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91066850	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91054100_91054149_91062840_91062974_91064814_91064966_91066816
ES.29038.41	chr6	-	7115	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	93.5974759275056	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093763	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075224_91075353_91075547_91075680_91078244_91078382_91093599
ES.29038.43	chr6	-	3888	18	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	11230	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	103.690015802693	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	4711	False	NA	-4	True	AATAAA	-18	NA	91019372	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993054_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236
ES.29038.48	chr6	-	9483	38	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	31	0	intron_retention	FALSE	non_canonical	1	1	junction_33	95.9412027757925	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91075573	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91055018_91055081_91062840_91062974_91064814_91064966_91066816_91066914_91075547
ES.29038.49	chr6	-	6917	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	73.3523966869726	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093777	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.5	chr6	-	7156	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	107.677733886816	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093721	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019720_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91065862_91065968_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.50	chr6	-	7000	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	20	junction_8	71.9162435622157	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093822	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003786_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.54	chr6	-	2130	7	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.432988253676	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91002330	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90995844_90995970_90997124_90997272_90998378_90998503_91002203
ES.29038.55	chr6	-	5945	6	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	-844	0	intron_retention	TRUE	non_canonical	0	0	junction_1	172.43595912686	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91003332	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90992118_90992207_90993064_90994313_90994531_90995718_90997272_90998378_90998503_91002203
ES.29038.57	chr6	-	6811	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-8	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_27	74.947405381422	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093786	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.59	chr6	-	6991	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	74.3066924956184	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093773	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994319_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.60	chr6	-	5612	30	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-6020	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.2936651548195	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	6818	False	NA	-4	True	AATAAA	-18	NA	91048846	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005914_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823
ES.29038.61	chr6	-	3614	16	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	-10471	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	110.233489567473	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	6372	False	NA	-4	True	AATAAA	-18	NA	91017711	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003828_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528
ES.29038.63	chr6	-	7061	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	74.7415885732897	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093822	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992905_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.64	chr6	-	4160	7	NIC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	-374	0	intron_retention	FALSE	canonical	3	404	junction_2	25.603819159562	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91002862	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90997272_90998378_90998503_91002203
ES.29038.65	chr6	-	6580	41	NNC	ENSMUSG00000030091.18	novel	6893	40	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.603965222878	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093806	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90990275_90990592_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037586_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.66	chr6	-	8366	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	3	0	intron_retention	FALSE	non_canonical	3	302	junction_33	45.3006270862163	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093798	90990051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.68	chr6	-	5079	4	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-2215	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	211.540907522766	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	90996626	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90995059_90995148
ES.29038.69	chr6	-	4440	23	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	5113	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.099526210428	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91037713	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991313_90992967_90993064_90994313_90994531_90995718_90995970_90998378_90998503_91002203_91002341_91003740_91003964_91005707_91005884_91007065_91007241_91008599_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543
ES.29038.7	chr6	-	5717	39	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.33987061859	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093775	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90990390_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032343_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052952_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.71	chr6	-	7013	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	74.3066924956184	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91093795	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075669_91078238_91078382_91093599
ES.29038.72	chr6	-	8144	5	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1012	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	223.502097305596	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91000019	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90995090_90995180_90998571_90998897
ES.29038.73	chr6	-	6123	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.0066888868837	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91093763	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90990348_90991210_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.74	chr6	-	2447	8	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	263	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	157.170387198877	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91002225	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998298_90998503_91002203
ES.29038.75	chr6	-	5159	28	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	85.894422705155	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91093779	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037653_91075607_91075680_91078244_91078382_91093599
ES.29038.76	chr6	-	8471	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	1	1	junction_33	93.8435336610543	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	91093786	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91055018_91055081_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.77	chr6	-	5074	7	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1725	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	205.409076938895	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGATGCGGTGGTTCTTG	NA	False	NA	-5	True	AATAAA	-17	NA	90999306	90990052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90995090_90995180_90997272_90998378_90998571_90998897
ES.29038.8	chr6	-	5914	40	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	72.6583695026053	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093777	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90990390_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.80	chr6	-	6878	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	8	-2	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_38	75.0327583122505	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGATGCGGTGGTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	91093793	90990053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91093599
ES.29038.81	chr6	-	6999	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	74.6766424020729	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGATGCGGTGGTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	91093784	90990053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005714_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.82	chr6	-	6092	33	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	81.8979691063826	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGATGCGGTGGTTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	91093771	90990053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91030405_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.84	chr6	-	5540	37	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	11	1542	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	73.9727333399124	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAGTCTCTTTCTGTCA	NA	False	NA	NA	False	NA	NA	NA	91093790	90994184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020724_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.85	chr6	-	3302	1	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	-509	-3790	mono-exon	FALSE	NA	NA	NA	NA	NA	580	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCAGGGCTACGGAT	NA	False	NA	NA	False	NA	NA	NA	91002997	90999695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_90999700_91003000
ES.29038.86	chr6	-	3207	21	ISM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	37	30444	4	9070	5prime_fragment	FALSE	non_canonical	3	302	junction_15	35.988748241638	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTTGACTGAATTAGCC	NA	False	NA	NA	False	AGTAAA	-19	NA	91093774	91020493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.87	chr6	-	2069	15	NNC	ENSMUSG00000030091.18	novel	488	4	NA	NA	4	-4039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.262567213332	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTTGCTTTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	91093807	91041735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91041832_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29038.88	chr6	-	2235	1	Intergenic	novelGene_24113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACAAACATCATGACCAA	NA	False	NA	NA	False	NA	NA	NA	91062721	91060486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_91060500_91062700
ES.29038.9	chr6	-	6994	40	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	74.9393530821302	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093777	90990049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030362_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ES.29039.1	chr6	+	2606	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	46	1	46	-1	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGCAGCTGCCCAAGA	NA	False	NA	28	True	AATAAA	-30	NA	91133692	91151673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
ES.29039.2	chr6	+	2863	2	Antisense	novelGene_ENSMUSG00000107397.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGGTGATCTAGACAG	NA	False	NA	NA	False	NA	NA	NA	91139244	91189427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_91142062_91189381
ES.29039.3	chr6	+	4539	7	ISM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	6574	3	-2412	-3	3prime_fragment	FALSE	canonical	3	7	junction_6	3.76017139089283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGGGCAGCTGCCCAA	NA	False	NA	26	True	AATAAA	-28	NA	91140220	91151671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
ES.2904.1	chr10	-	4456	2	Antisense	novelGene_ENSMUSG00000020088.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTTATCCACTGAGCC	NA	False	NA	NA	False	NA	NA	NA	61522114	61511283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61511323_61517697
ES.2904.2	chr10	-	3978	4	Antisense	novelGene_ENSMUSG00000020088.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTTATCCACTGAGCC	NA	False	NA	NA	False	NA	NA	NA	61522116	61511283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61511323_61517697_61520731_61520842_61520965_61521332
ES.2904.3	chr10	-	4075	3	Antisense	novelGene_ENSMUSG00000020088.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAACAAAAGCACTCT	NA	False	NA	NA	False	NA	NA	NA	61522114	61511296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61511323_61517697_61520965_61521332
ES.2904.4	chr10	-	4331	3	Antisense	novelGene_ENSMUSG00000020088.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAACAAAAGCACTCT	NA	False	NA	NA	False	NA	NA	NA	61522114	61511296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_61511323_61517697_61520731_61520842
ES.29040.1	chr6	+	4335	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	310	-1	-57	0	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTTTGACTTCTT	NA	False	NA	NA	False	ATTAAA	-27	NA	91189746	91249522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.2	chr6	+	4159	16	NIC	ENSMUSG00000064080.13	novel	4644	17	NA	NA	-30	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	7.00349119289008	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGGTTATTCAGTCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	91189773	91249511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.3	chr6	+	3934	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	368	342	1	-234	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGTAGCACAGACCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	91189804	91249179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.4	chr6	+	4689	16	NIC	ENSMUSG00000064080.13	novel	4644	17	NA	NA	1	-13	intron_retention	FALSE	canonical	2	6	junction_1	5.5095876030385	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGAAAGGTTATTCAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	91189813	91249508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.5	chr6	+	4373	17	NNC	ENSMUSG00000064080.13	novel	1612	6	NA	NA	19601	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.2549980015984	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTTATTCAGTCTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	91209413	91249512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91209598_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.6	chr6	+	3142	16	NNC	ENSMUSG00000064080.13	novel	1612	6	NA	NA	-5353	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.71319216234973	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGTTATTCAGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	91227629	91249510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91227730_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241536_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.7	chr6	+	2962	16	NNC	ENSMUSG00000064080.13	novel	1612	6	NA	NA	-5313	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.410408203331	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTATTCAGTCTCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	91227669	91249514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91227730_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29040.8	chr6	+	3011	15	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	38290	11	-5256	-11	3prime_fragment	FALSE	canonical	3	11	junction_5	4.6246897303539	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGTTATTCAGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	91227726	91249510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ES.29041.1	chr6	+	178	1	Intergenic	novelGene_24114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	91402833	91403011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91402800_91403000
ES.29042.1	chr6	-	5469	2	NNC	ENSMUSG00000097693.4	novel	1112	3	NA	NA	25	-2013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTGCTTTGCATGTCT	NA	False	NA	NA	False	TTTAAA	-16	NA	91417869	91409454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91412044_91414989
ES.29043.1	chr6	+	463	2	FSM	ENSMUSG00000100680.2	ENSMUST00000186472.2	486	2	22	1	22	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTCTACACTCATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	91417990	91418736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91418141_91418423
ES.29044.1	chr6	+	3549	13	NNC	ENSMUSG00000030095.11	novel	2903	12	NA	NA	-2229	-535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5022221563825	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATTTCTAAGTTTCCT	7459	False	NA	NA	False	AATAAA	-19	NA	91448455	91464910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91449695_91450742_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.10	chr6	+	2129	5	ISM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	8226	10	5329	-10	3prime_fragment	FALSE	canonical	3	110	junction_3	8.89873586527884	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATCTTGCCAGTCGTT	NA	False	NA	NA	False	AATAAA	-20	NA	91458910	91465435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.2	chr6	+	4146	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	-1247	4	-1247	-4	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCAGTCGTTTGCTGT	8441	False	NA	NA	False	AATAAA	-26	NA	91449437	91465441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.3	chr6	+	4752	9	NIC	ENSMUSG00000030095.11	novel	2903	12	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	107	junction_4	13.9731886124821	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTTGCCAGTCGTTTG	9672	False	NA	NA	False	AATAAA	-22	NA	91450668	91465437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91450881_91454226_91455323_91455687_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.4	chr6	+	2363	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	5	535	5	-535	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATTTCTAAGTTTCCT	9693	False	NA	NA	False	AATAAA	-19	NA	91450689	91464910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.6	chr6	+	9551	6	NIC	ENSMUSG00000030095.11	novel	2903	12	NA	NA	16	-10	intron_retention	FALSE	canonical	3	110	junction_4	15.5357651887508	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATCTTGCCAGTCGTT	9760	False	NA	NA	False	AATAAA	-20	NA	91450756	91465435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91455323_91455687_91456933_91457631_91459036_91459235_91459745_91462298_91462417_91463726
ES.29044.7	chr6	+	5606	10	NIC	ENSMUSG00000030095.11	novel	2903	12	NA	NA	862	-536	intron_retention	FALSE	canonical	3	107	junction_5	15.129074290547	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCATTTCTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	91451602	91464909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.8	chr6	+	2266	12	NIC	ENSMUSG00000030095.11	novel	465	3	NA	NA	169	-535	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	39.0020130864214	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCATTTCTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	91453750	91464910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91453845_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29044.9	chr6	+	2414	9	ISM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	5000	11	2103	-11	3prime_fragment	FALSE	canonical	3	107	junction_4	12.5499003980111	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGATCTTGCCAGTCGT	NA	False	NA	NA	False	AATAAA	-19	NA	91455684	91465434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ES.29045.1	chr6	-	3468	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	1	3	1	-3	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTATGCAGTACATGA	NA	False	NA	NA	False	NA	NA	NA	91450527	91439156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.10	chr6	-	1013	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	13	2446	13	-2446	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGGGTCCATTCCTAC	NA	False	NA	0	True	AGTAAA	-20	NA	91450515	91441599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.11	chr6	-	1173	4	NNC	ENSMUSG00000034203.9	novel	3472	3	NA	NA	-14	-2457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	472.111804084113	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCCTTTAAGAGTGGG	NA	False	NA	-11	True	AGTAAA	-9	NA	91450445	91441610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91442296_91444664_91444764_91447694_91447936_91450297
ES.29045.12	chr6	-	776	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	2	2694	2	-2694	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGCACCTGTGTCCT	NA	False	NA	NA	False	AAGAAA	-5	NA	91450526	91441847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.13	chr6	-	173	1	Intergenic	novelGene_24115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAGAAAGAAAACAAGC	NA	False	NA	3	True	NA	NA	NA	91448522	91448349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_91448300_91448500
ES.29045.14	chr6	-	1993	1	FSM	ENSMUSG00000034203.9	ENSMUST00000205802.2	1854	1	-96	-43	1	43	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGAAATGGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	91450527	91448534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91448500_91450500
ES.29045.2	chr6	-	3323	4	NNC	ENSMUSG00000034203.9	novel	3472	3	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	486.339387670791	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTATGCAGTACATGA	NA	False	NA	NA	False	NA	NA	NA	91450427	91439156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91440566_91440610_91442296_91444664_91444764_91450297
ES.29045.3	chr6	-	3087	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	19	366	19	-366	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAAACATGCTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	91450509	91439519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.4	chr6	-	2808	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	16	648	16	-648	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTTGTCTATACCATA	NA	False	NA	NA	False	NA	NA	NA	91450512	91439801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.5	chr6	-	4259	2	NIC	ENSMUSG00000034203.9	novel	3472	3	NA	NA	22	-1463	intron_retention	FALSE	canonical	3	1059	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGTTGAGTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	91450409	91440616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91444764_91450297
ES.29045.6	chr6	-	1538	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	-171	2105	-171	-2105	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATGGCTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	91450699	91441258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91442296_91444664_91444764_91450297
ES.29045.8	chr6	-	1405	3	NNC	ENSMUSG00000034203.9	novel	3472	3	NA	NA	31	-2105	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	491.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATGGCTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	91450400	91441258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91442296_91444664_91444764_91450131
ES.29045.9	chr6	-	2473	1	NIC	ENSMUSG00000034203.9	novel	3472	3	NA	NA	6694	-2111	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGATTTTGAATGGCTT	NA	False	NA	-8	True	ATTAAA	-14	NA	91443737	91441264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91441300_91443700
ES.29046.1	chr6	+	766	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	9	-32	9	32	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTACCTGGTGTGTTC	NA	False	NA	79	True	NA	NA	NA	91492918	91499639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ES.29046.10	chr6	+	708	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1030.86123648573	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTACTTTTTTTTTTAA	NA	False	NA	40	True	ATTAAA	-16	NA	91493024	91499600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493061_91493942_91494141_91496530_91496627_91499222
ES.29046.11	chr6	+	3106	2	NIC	ENSMUSG00000034192.6	novel	618	4	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	False	NA	42	True	ATTAAA	-18	NA	91493026	91499602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91493061_91496530
ES.29046.12	chr6	+	4187	2	NIC	ENSMUSG00000034192.6	novel	618	4	NA	NA	-2	1	intron_retention	FALSE	canonical	3	2423	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTTTTTTTAATGT	NA	False	NA	43	True	ATTAAA	-19	NA	91493026	91499603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91494141_91496530
ES.29046.13	chr6	+	2567	7	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-2	11220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	959.954585152629	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTTTGTTATTCTA	NA	False	NA	NA	False	AATAAA	-12	NA	91493026	91510827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493061_91494029_91494141_91496530_91496627_91503755_91503855_91504855_91504904_91505073_91505736_91509310
ES.29046.16	chr6	+	360	3	FSM	ENSMUSG00000034192.6	ENSMUST00000126253.2	520	3	93	67	2	-67	multi-exon	FALSE	canonical	3	1484	junction_1	469.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAAGTGTTTTTGGA	NA	False	NA	NA	False	AATAGA	-11	NA	91493031	91496750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91493061_91494029_91494141_91496530
ES.29046.2	chr6	+	1656	3	NIC	ENSMUSG00000034192.6	novel	618	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	1827	junction_2	298	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	False	NA	42	True	ATTAAA	-18	NA	91492960	91499602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91494141_91496530_91496627_91499222
ES.29046.3	chr6	+	3251	3	FSM	ENSMUSG00000108584.2_ENSMUSG00000034192.6	ENSMUST00000126253.2	520	3	58	-2789	-32	-1	multi-exon	FALSE	canonical	3	1484	junction_1	469.5	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTTTTAATGTGTC	NA	False	NA	46	True	ATTAAA	-22	NA	91492996	91499606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91493061_91494029_91494141_91496530
ES.29046.4	chr6	+	1517	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-17	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1030.86123648573	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTTTTTTTAATGT	NA	False	NA	43	True	ATTAAA	-19	NA	91493011	91499603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493654_91493742_91494141_91496530_91496627_91499222
ES.29046.5	chr6	+	1644	2	NNC	ENSMUSG00000034192.6	novel	504	2	NA	NA	-12	-239	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91493016	91494751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493654_91493744
ES.29046.6	chr6	+	638	5	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-12	16714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	893.227994411281	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGTCAAGTGATACACA	NA	False	NA	NA	False	NA	NA	NA	91493016	91516321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222_91499592_91516303
ES.29046.7	chr6	+	3024	3	NIC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	1484	junction_1	171.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTTTTAATGTGTC	NA	False	NA	46	True	ATTAAA	-22	NA	91493017	91499606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91493061_91494029_91496627_91499222
ES.29046.8	chr6	+	624	4	NNC	ENSMUSG00000034192.6	novel	743	4	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	1022.6176650581	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTTTTTTTAATGT	NA	False	NA	43	True	ATTAAA	-19	NA	91493018	91499603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493061_91494035_91494141_91496530_91496627_91499222
ES.29046.9	chr6	+	1669	2	NNC	ENSMUSG00000034192.6	novel	504	2	NA	NA	-4	-212	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTCATAGAAATGGGTA	NA	False	NA	NA	False	NA	NA	NA	91493024	91494778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91493654_91493738
ES.29047.1	chr6	-	6920	15	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	44	3	intron_retention	TRUE	non_canonical	0	0	junction_5	31.2328320188607	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGCAAATTTATTTTT	417	False	NA	3	True	AATAAA	-19	NA	91492822	91466283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91472548_91472726_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.10	chr6	-	5447	15	NIC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	38	-5	intron_retention	FALSE	canonical	3	81	junction_2	18.6049148652408	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	411	False	NA	-5	True	AATAAA	-11	NA	91492828	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.11	chr6	-	2746	4	NIC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	21733	-5	intron_retention	FALSE	canonical	3	81	junction_2	5.35412613473634	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	2484	False	NA	-5	True	AATAAA	-11	NA	91471044	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91467249_91468202_91468293_91469252_91469994_91470086
ES.29047.12	chr6	-	3623	16	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.7658097121208	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	434	False	NA	-5	True	AATAAA	-11	NA	91492805	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91474952_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.13	chr6	-	6456	15	NIC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	17	-5	intron_retention	FALSE	canonical	3	81	junction_2	18.6182103087821	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	390	False	NA	-5	True	AATAAA	-11	NA	91492849	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.14	chr6	-	3627	16	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	30.009331881933	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	392	False	NA	-5	True	AATAAA	-11	NA	91492847	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481732_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.15	chr6	-	3596	16	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.2202286924209	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACCCCTGGCTGCAAA	407	False	NA	-6	True	AATAAA	-10	NA	91492832	91466292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482366_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.17	chr6	-	3488	17	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.2732683942321	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAACCCCTGGCTGCAA	411	False	NA	-7	True	AATAAA	-9	NA	91492828	91466293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91476408_91476496_91477120_91477903_91477994_91480982_91481104_91481560_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.18	chr6	-	3186	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	-6	454	-6	-454	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTATCTGTCCTTTATT	363	False	NA	2	True	NA	NA	NA	91492876	91466740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.19	chr6	-	5017	15	NIC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	17	-456	intron_retention	FALSE	canonical	3	81	junction_2	18.6049148652408	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTATCTGTCCTTTA	390	False	NA	0	True	NA	NA	NA	91492849	91466742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.2	chr6	-	3684	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	-49	-1	-49	1	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGCTGCAAATTTATTT	320	False	NA	1	True	AATAAA	-17	NA	91492919	91466285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.20	chr6	-	3122	12	NNC	ENSMUSG00000030094.9	novel	330	3	NA	NA	27	-2666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.3452226105656	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTGTAATTCTGTGT	400	False	NA	NA	False	AATAAA	-24	NA	91492839	91471920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91472548_91472726_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.21	chr6	-	4928	11	NNC	ENSMUSG00000030094.9	novel	330	3	NA	NA	-13	-2671	intron_retention	FALSE	non_canonical	0	0	junction_1	38.1188929534949	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTTTATTTGTAATTC	449	False	NA	NA	False	AATAAA	-19	NA	91492790	91471925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91472548_91472726_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.22	chr6	-	3318	11	ISM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	5	5643	1	-2675	5prime_fragment	FALSE	canonical	3	87	junction_9	17.9120071460459	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGTCTTTATTTGTA	374	False	NA	NA	False	AATAAA	-15	NA	91492865	91471929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.23	chr6	-	3763	11	NNC	ENSMUSG00000030094.9	novel	330	3	NA	NA	27	-2687	intron_retention	FALSE	non_canonical	0	0	junction_1	36.4594295073305	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGAATTTTATTTAG	400	False	NA	NA	False	AATAAA	-3	NA	91492839	91471941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91472548_91472726_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.24	chr6	-	2550	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-93	5308	0	-5308	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAAGTGTGTCTGTGT	369	False	NA	NA	False	AATAAA	-35	NA	91492870	91474562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.25	chr6	-	2421	10	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-94	5438	-1	-5438	5prime_fragment	FALSE	canonical	3	87	junction_8	18.5099239315189	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTAGAAGTGTTCCT	368	False	NA	NA	False	AATAAA	-20	NA	91492871	91474692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.26	chr6	-	2009	9	ISM	ENSMUSG00000030094.9	ENSMUST00000150279.3	4347	13	-21	6851	-21	-6851	5prime_fragment	FALSE	canonical	3	87	junction_7	19.6273883896967	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATACTTTTCTATTTA	441	False	NA	NA	False	AATATA	-18	NA	91492798	91476105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.3	chr6	-	5362	15	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_6	32.5814520917678	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	440	False	NA	0	True	AATAAA	-16	NA	91492799	91466286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91474286_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.4	chr6	-	3324	16	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	5175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.8317296880268	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	5637	False	NA	0	True	AATAAA	-16	NA	91487602	91466286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91476408_91476496_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438
ES.29047.6	chr6	-	3445	17	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.7656845161943	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	375	False	NA	0	True	AATAAA	-16	NA	91492864	91466286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91476408_91476590_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29047.7	chr6	-	3088	15	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	7256	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.8107445588398	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	7718	False	NA	0	True	AATAAA	-16	NA	91485521	91466286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91476408_91476512_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470
ES.29047.8	chr6	-	6225	16	NNC	ENSMUSG00000030094.9	novel	3634	16	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.7583934662249	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCCTGGCTGCAAAT	442	False	NA	-5	True	AATAAA	-11	NA	91492797	91466291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91472548_91472726_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ES.29048.1	chr6	-	2985	1	Antisense	novelGene_ENSMUSG00000108584.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAAAACACTGAGCTAT	9902	False	NA	NA	False	NA	NA	NA	91505981	91502996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_91503000_91506000
ES.29049.1	chr6	+	141	1	Intergenic	novelGene_24116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	91541564	91541705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91541600_91541700
ES.2905.1	chr10	+	2314	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	False	NA	21	True	AATAAA	-24	NA	61531264	61538552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
ES.2905.10	chr10	+	2058	3	NIC	ENSMUSG00000020087.6	novel	512	4	NA	NA	49	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	138	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTCTGTCTGTTGGC	NA	False	NA	14	True	AATAAA	-17	NA	61531341	61538545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61532522_61535262_61535408_61537812
ES.2905.11	chr10	+	3220	4	NNC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	50	752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.033665740556	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTTTCTGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	61531342	61539304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61532705_61534027_61534208_61535221_61535408_61537812
ES.2905.2	chr10	+	3270	3	NIC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	23	-7	intron_retention	FALSE	canonical	3	269	junction_1	3.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTCTGTCTGTTGGC	NA	False	NA	14	True	AATAAA	-17	NA	61531315	61538545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61532522_61534076_61535408_61537812
ES.2905.3	chr10	+	2214	4	FSM	ENSMUSG00000020087.6	ENSMUST00000218280.2	512	4	-1172	-530	24	-7	multi-exon	FALSE	canonical	0	0	junction_2	128.489515352637	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTCTGTCTGTTGGC	NA	False	NA	14	True	AATAAA	-17	NA	61531316	61538545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61532522_61534076_61534208_61535262_61535408_61537812
ES.2905.4	chr10	+	3626	2	NIC	ENSMUSG00000020087.6	novel	595	3	NA	NA	24	-5	intron_retention	FALSE	canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTGTCTGTTGGCTG	NA	False	NA	16	True	AATAAA	-19	NA	61531316	61538547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61534208_61537812
ES.2905.5	chr10	+	3813	3	NIC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	26	-2	intron_retention	FALSE	canonical	3	276	junction_2	4	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTGTTGGCTGCTT	NA	False	NA	19	True	AATAAA	-22	NA	61531318	61538550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61534208_61535221_61535408_61537812
ES.2905.6	chr10	+	1920	2	NIC	ENSMUSG00000020087.6	novel	595	3	NA	NA	37	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGACCTCTTTCTGTCTG	NA	False	NA	9	True	AATAAA	-12	NA	61531329	61538540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61532522_61537812
ES.2905.7	chr10	+	2425	4	NNC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	131.562405977797	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTCTGTCTGTTGGC	NA	False	NA	14	True	AATAAA	-17	NA	61531329	61538545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61532705_61534076_61534208_61535221_61535408_61537812
ES.2905.8	chr10	+	2166	4	NNC	ENSMUSG00000020087.6	novel	2286	4	NA	NA	48	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.033665740556	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTCTGTCTGTTGGC	NA	False	NA	14	True	AATAAA	-17	NA	61531340	61538545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61532522_61534141_61534208_61535221_61535408_61537812
ES.2905.9	chr10	+	4799	2	NIC	ENSMUSG00000020087.6	novel	512	4	NA	NA	48	-8	intron_retention	FALSE	canonical	3	276	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCTTTCTGTCTGTTGG	NA	False	NA	13	True	AATAAA	-16	NA	61531340	61538544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61535408_61537812
ES.29050.1	chr6	+	960	3	NNC	ENSMUSG00000108308.2	novel	1678	2	NA	NA	4402	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGTCCTCATTAATCG	NA	False	NA	NA	False	AATAAA	-21	NA	91580615	91582498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91580810_91581003_91581135_91581863
ES.29050.2	chr6	+	1657	2	NNC	ENSMUSG00000108308.2	novel	1678	2	NA	NA	4429	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACTTCAGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	91580642	91582493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91580810_91581003
ES.29051.1	chr6	+	178	1	Intergenic	novelGene_24117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	91618427	91618605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91618400_91618600
ES.29052.1	chr6	+	213	1	Intergenic	novelGene_24118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGTCCCTGTTACCC	NA	False	NA	NA	False	NA	NA	NA	91641148	91641361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91641100_91641400
ES.29053.1	chr6	+	6060	15	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-693	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5105698090714	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91660340	91736047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91660471_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.10	chr6	+	6923	17	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.689987473032	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661047	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91667460_91667621_91668870_91669465_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.13	chr6	+	6019	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	95.9559050516732	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661052	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729294_91731894
ES.29053.14	chr6	+	6117	14	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.8156288529688	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661053	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.15	chr6	+	2486	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	30	3670	-12	2618	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGCCACTTGAATTG	NA	False	NA	NA	False	NA	NA	NA	91661063	91732377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.19	chr6	+	6253	16	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	119.724387193624	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661080	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.2	chr6	+	6283	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-445	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	93.4925784339175	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91660588	91736047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91660725_91661072_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.20	chr6	+	6295	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.347623298835	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAACGTCTGGTGTGTT	NA	False	NA	24	True	AATAAA	-18	NA	91661082	91736040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91689860_91690026_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.21	chr6	+	5364	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	50	772	8	-772	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCACACACACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91661083	91735275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.22	chr6	+	6100	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	97.4978021730307	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661083	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721930_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.23	chr6	+	6236	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.347623298835	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661083	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91676116_91676220_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.24	chr6	+	6134	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	97.4735181200201	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661083	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718028_91718149_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.26	chr6	+	6414	17	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	140.407874044692	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661084	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91688492_91688610_91689860_91690026_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.27	chr6	+	2572	16	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	2608	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	119.724387193624	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTCATACACTTTGCC	NA	False	NA	NA	False	NA	NA	NA	91661084	91732367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.28	chr6	+	6301	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.843182837477	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAAGAACGTCTGGT	NA	False	NA	19	True	AATAAA	-13	NA	91661084	91736035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91682989_91683168_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.29	chr6	+	5223	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	94.2057794877198	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661084	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894_91732156_91733062
ES.29053.3	chr6	+	6228	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-442	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.2057794877198	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91660591	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91660676_91661072_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.30	chr6	+	2710	16	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	9	2746	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	119.724387193624	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATGCTGGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	91661084	91732505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.32	chr6	+	2278	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	52	3856	10	2432	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGTATATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	91661085	91732191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.33	chr6	+	2418	14	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	10	2616	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.8156288529688	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACTTTGCCACTTGAAT	NA	False	NA	NA	False	NA	NA	NA	91661085	91732375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.34	chr6	+	6129	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	10	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.5105698090714	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAAGAACGTCTGGT	NA	False	NA	19	True	AATAAA	-13	NA	91661085	91736035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675962_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.35	chr6	+	6696	13	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	11	-5	intron_retention	FALSE	canonical	3	310	junction_9	31.4566500653412	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661086	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718284_91721897_91722011_91725313_91725452_91726707_91727355_91729267_91729439_91731894
ES.29053.36	chr6	+	6230	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.125469279085	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91661100	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91667460_91667621_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.39	chr6	+	4945	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	94.2057794877198	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661102	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894_91732938_91734106
ES.29053.4	chr6	+	6198	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	-15	3	-15	-3	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661018	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.40	chr6	+	6149	15	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97.4125720000939	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661102	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676049_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.41	chr6	+	2625	16	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	2	2631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.347623298835	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGGTCTTGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	91661102	91732390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91661290_91675969_91676014_91689860_91690026_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.43	chr6	+	7190	16	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	7187	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.940640360489	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91668316	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91669465_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.44	chr6	+	6005	14	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-2540	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	100.324974915103	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91676097	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91676220_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.45	chr6	+	6114	15	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-2536	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	126.923888489865	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAACGTCTGGTGTGTT	NA	False	NA	24	True	AATAAA	-18	NA	91676101	91736040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91676220_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.46	chr6	+	6085	14	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-142	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.089450107699	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91678495	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91678698_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.47	chr6	+	6097	14	NIC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-45	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	98.2890917758943	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91678592	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.48	chr6	+	2549	14	NIC	ENSMUSG00000030096.9	novel	738	6	NA	NA	-36	2746	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	98.2890917758943	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATGCTGGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	91678601	91732505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.49	chr6	+	6026	4	NIC	ENSMUSG00000030096.9	novel	431	3	NA	NA	-1	-3688	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	177.296362060816	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCTCCCTGGGTGATG	NA	False	NA	NA	False	AATAAA	-28	NA	91678636	91708473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992
ES.29053.5	chr6	+	2636	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	8	3542	8	2746	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATGCTGGGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	91661041	91732505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.50	chr6	+	1103	4	NIC	ENSMUSG00000030096.9	novel	431	3	NA	NA	0	-361	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	177.296362060816	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTGGGAAAAACATTCT	NA	False	NA	NA	False	NA	NA	NA	91678637	91703551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992
ES.29053.52	chr6	+	6102	15	NIC	ENSMUSG00000030096.9	novel	738	6	NA	NA	67	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	126.748767252388	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91678704	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91678807_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.53	chr6	+	6030	14	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	4172	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	100.579739628161	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	NA	False	NA	26	True	AATAAA	-20	NA	91682809	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91682959_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.54	chr6	+	5956	14	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	5528	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.089450107699	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	69	False	NA	28	True	AATAAA	-22	NA	91684165	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91684239_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.55	chr6	+	6040	15	NNC	ENSMUSG00000030096.9	novel	738	6	NA	NA	5713	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.099290288486	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	166	False	NA	28	True	AATAAA	-22	NA	91684350	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91684391_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.56	chr6	+	1832	1	Antisense	novelGene_ENSMUSG00000108574.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTTTGTTTGTTT	5211	False	NA	NA	False	NA	NA	NA	91689395	91691227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_91689400_91691200
ES.29053.58	chr6	+	5566	13	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-41	36123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	104.969836937411	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGCCTCGGGATTGAA	243	False	NA	NA	False	TTTAAA	-3	NA	91701898	91772170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894_91736024_91772150
ES.29053.59	chr6	+	5507	11	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	41958	5	1052	-5	3prime_fragment	FALSE	canonical	3	310	junction_6	29.7529830437219	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	1336	False	NA	26	True	AATAAA	-20	NA	91702991	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.60	chr6	+	5221	10	NNC	ENSMUSG00000030096.9	novel	682	2	NA	NA	-1198	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.822661378889	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAACGTCTGGTGTGTTT	5985	False	NA	25	True	AATAAA	-19	NA	91715431	91736041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91715516_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.61	chr6	+	5140	9	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	55822	5	226	-5	3prime_fragment	FALSE	canonical	3	310	junction_4	32.3959874058501	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	7409	False	NA	26	True	AATAAA	-20	NA	91716855	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.62	chr6	+	3926	10	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	228	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	115.822661378889	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	7411	False	NA	26	True	AATAAA	-20	NA	91716857	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894_91732605_91733816
ES.29053.63	chr6	+	5008	8	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	56893	3	1297	-3	3prime_fragment	FALSE	canonical	3	310	junction_3	28.8281325182502	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	8480	False	NA	28	True	AATAAA	-22	NA	91717926	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.64	chr6	+	8703	3	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-1166	-5	intron_retention	FALSE	canonical	3	318	junction_1	32.5	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	2441	False	NA	26	True	AATAAA	-20	NA	91724170	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91725452_91726707_91727355_91729267
ES.29053.65	chr6	+	4664	5	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	64277	5	-26	-5	3prime_fragment	FALSE	canonical	3	318	junction_1	27.6439414700581	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	373	False	NA	26	True	AATAAA	-20	NA	91725310	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29053.66	chr6	+	6293	3	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	42	-7	intron_retention	FALSE	canonical	3	383	junction_1	2.5	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAACGTCTGGTGTGTT	441	False	NA	24	True	AATAAA	-18	NA	91725378	91736040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91727355_91729267_91729439_91731894
ES.29053.67	chr6	+	3993	5	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-393	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	164.314294874183	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACGTCTGGTGTGTTTC	553	False	NA	26	True	AATAAA	-20	NA	91726771	91736042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91726811_91727253_91727355_91729267_91729439_91731894_91735280_91735745
ES.29053.68	chr6	+	3930	2	NNC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	4773	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAACGTCTGGTGTGTTT	5719	False	NA	25	True	AATAAA	-19	NA	91731937	91736041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_91735011_91735184
ES.29053.9	chr6	+	6034	14	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	98.8770678985427	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTCTGGTGTGTTTCGG	NA	False	NA	28	True	AATAAA	-22	NA	91661047	91736044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ES.29054.1	chr6	-	3970	2	Intergenic	novelGene_24119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCATGGGCTGAAGAGT	5789	False	NA	NA	False	NA	NA	NA	91700473	91686239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_91687036_91697299
ES.29055.1	chr6	-	5292	24	NNC	ENSMUSG00000030098.16	novel	5206	24	NA	NA	-16655	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.38312814961625	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTAGCCTCTCAACT	NA	False	NA	60	True	TATAAA	-34	NA	91820886	91738434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91740588_91741676_91741824_91742228_91742373_91749613_91749720_91750773_91750943_91751662_91751843_91752325_91752466_91754345_91754491_91755579_91755726_91755815_91755883_91756115_91756197_91756804_91756951_91757311_91757499_91759296_91759441_91759763_91759887_91760550_91760721_91760804_91760953_91761665_91761812_91762661_91762738_91763447_91763535_91764164_91764311_91764988_91765125_91765344_91765426_91820662
ES.29055.2	chr6	-	5314	23	NNC	ENSMUSG00000030098.16	novel	5206	24	NA	NA	-16673	0	intron_retention	FALSE	canonical	0	0	junction_5	1.4142135623731	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTGTTTGCTTTATA	NA	False	NA	5	True	AATAAA	-19	NA	91820904	91738489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_91740588_91741676_91741824_91742228_91742373_91749613_91749720_91750773_91750943_91751662_91751843_91752325_91752466_91754345_91754491_91755579_91755726_91755815_91755883_91756115_91756197_91756804_91756951_91757311_91757499_91759296_91759441_91759763_91759887_91760550_91760953_91761665_91761812_91762661_91762738_91763447_91763535_91764189_91764311_91764988_91765125_91765344_91765426_91820662
ES.29055.3	chr6	-	5076	24	NIC	ENSMUSG00000030098.16	novel	5206	24	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.38312814961625	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGGTTTGTTTGCTT	NA	False	NA	1	True	AATAAA	-15	NA	91773247	91738493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_91740588_91741676_91741824_91742228_91742373_91749613_91749720_91750773_91750943_91751662_91751843_91752325_91752466_91754345_91754491_91755579_91755726_91755815_91755883_91756115_91756197_91756804_91756951_91757311_91757499_91759296_91759441_91759763_91759887_91760550_91760721_91760804_91760953_91761665_91761812_91762661_91762738_91763447_91763535_91764164_91764311_91764988_91765125_91765344_91765426_91773180
ES.29056.1	chr6	-	178	1	Intergenic	novelGene_24120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	91852017	91851839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_91851800_91852000
ES.29057.1	chr6	+	1761	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	-2	-7	-2	7	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGTTTCTTTTTTAGA	NA	False	NA	19	True	TATAAA	-23	NA	91855031	91876831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ES.29057.2	chr6	+	1499	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	2	251	2	-251	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGCTGGTTGTATTT	NA	False	NA	8	True	TATAAA	-18	NA	91855035	91876573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ES.29057.6	chr6	+	2133	3	FSM	ENSMUSG00000034083.17	ENSMUST00000138868.8	3980	3	26	1821	4	-1821	multi-exon	FALSE	canonical	3	200	junction_1	5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	91855059	91860147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91855168_91857237_91857343_91858227
ES.29058.1	chr6	+	176	1	Intergenic	novelGene_24121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCCATTTGGA	NA	False	NA	NA	False	NA	NA	NA	91930916	91931092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91930900_91931100
ES.29059.1	chr6	+	6111	21	FSM	ENSMUSG00000034037.15	ENSMUST00000089334.9	6095	21	-15	-1	-15	1	multi-exon	FALSE	canonical	0	0	junction_5	1.67032930884901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTACTTGTAGTATAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	91955843	92052986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_91956024_91963781_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92027531_92028060_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163_92043244_92044482_92044583_92044865_92045004_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
ES.29059.2	chr6	+	5903	20	NIC	ENSMUSG00000034037.15	novel	6095	21	NA	NA	32	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1.87267861838497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCATGAATTTCCAG	NA	False	NA	NA	False	ATTAAA	-18	NA	91955890	92052963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91956024_91963781_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92027531_92028060_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163_92043244_92044482_92044583_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
ES.29059.4	chr6	+	3945	14	ISM	ENSMUSG00000034037.15	ENSMUST00000089334.9	6095	21	76	9595	76	-7806	5prime_fragment	FALSE	canonical	0	0	junction_5	1.68178546992888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCTGAAGTTGACCT	NA	False	NA	NA	False	GATAAA	-35	NA	91955934	92043390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_91956024_91963781_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92027531_92028060_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163
ES.29059.5	chr6	+	5149	1	Intergenic	novelGene_24122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	91956483	91961632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_91956500_91961600
ES.29059.6	chr6	+	4055	19	NIC	ENSMUSG00000034037.15	novel	5621	20	NA	NA	2070	-26	intron_retention	FALSE	canonical	0	0	junction_4	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTGCATGAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	91966160	92052959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_91966447_92001484_92001615_92015005_92015065_92015167_92015199_92026986_92027148_92027370_92028149_92030207_92030259_92030791_92030851_92038784_92038857_92039816_92039886_92042128_92042213_92043163_92043244_92044482_92044583_92044865_92045004_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
ES.29059.7	chr6	+	2316	7	FSM	ENSMUSG00000034037.15	ENSMUST00000146743.2	2294	7	-24	2	-24	-2	multi-exon	FALSE	canonical	2	3	junction_4	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTTGTAGTATA	NA	False	NA	NA	False	AATAAA	-18	NA	92044385	92052983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_92044583_92044865_92045004_92045428_92045559_92046348_92046483_92048292_92048422_92051078_92051234_92051550
ES.2906.1	chr10	+	3132	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-36	-10	0	4	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTTTTATTTTTTTC	NA	False	NA	12	True	AATAAA	-23	NA	61551065	61574436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ES.2906.10	chr10	+	1567	10	NNC	ENSMUSG00000020085.16	novel	3086	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	62.1630671185089	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61551095	61574426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571233_61571438_61572361_61572538_61574065
ES.2906.11	chr10	+	1654	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-6	1438	6	-1438	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACGTTATTAACTGAGG	NA	False	NA	NA	False	NA	NA	NA	61551095	61572988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ES.2906.13	chr10	+	5163	8	NIC	ENSMUSG00000020085.16	novel	3086	9	NA	NA	-4	432	intron_retention	FALSE	canonical	3	116	junction_1	25.8330590286073	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTGCTCTCACTTTCT	NA	False	NA	NA	False	NA	NA	NA	61551097	61575471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
ES.2906.14	chr10	+	2155	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	9	-722	-3	722	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAAAACATGGTT	NA	False	NA	NA	False	NA	NA	NA	61551098	61575761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ES.2906.15	chr10	+	4085	8	NNC	ENSMUSG00000020085.16	novel	3086	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	11	junction_3	49.3756942601668	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGCTGGAGCTTTTAT	NA	False	NA	5	True	AATAAA	-16	NA	61551099	61574429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563459_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
ES.2906.16	chr10	+	3701	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	-2	-613	-2	0	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCGATCCTCCTCCTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	61551099	61575039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ES.2906.17	chr10	+	1446	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	60	6	0	0	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61551101	61574426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ES.2906.18	chr10	+	5042	8	NNC	ENSMUSG00000020085.16	novel	1442	10	NA	NA	0	735	intron_retention	FALSE	non_canonical	0	0	junction_6	66.9102353294078	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTTTTTTGTTTTGTTT	NA	False	NA	NA	False	AAAAAG	-8	NA	61551101	61575774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61571438_61572357_61572538_61574806
ES.2906.2	chr10	+	684	5	ISM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	24	10342	0	390	5prime_fragment	FALSE	canonical	3	116	junction_1	28.6050694807756	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTGTTTGATTGTTT	NA	False	NA	NA	False	AAAAAG	-14	NA	61551065	61564090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907
ES.2906.20	chr10	+	1236	9	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	60.8398255668111	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61551110	61574426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61572361_61572538_61574177
ES.2906.21	chr10	+	175	1	Intergenic	novelGene_2230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	61554400	61554575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61554400_61554600
ES.2906.22	chr10	+	3062	8	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	10530	-3	-2295	-3	3prime_fragment	FALSE	canonical	3	123	junction_6	24.6733765464738	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACGCTGGAGCTTTTAT	NA	False	NA	5	True	AATAAA	-16	NA	61561631	61574429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ES.2906.23	chr10	+	3174	1	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	7326	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61571252	61574426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61571300_61574400
ES.2906.3	chr10	+	5994	7	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	116	junction_1	27.0765376089501	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551072	61574432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61571438_61572361
ES.2906.4	chr10	+	4139	8	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	116	junction_1	25.8330590286073	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551082	61574432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
ES.2906.5	chr10	+	1448	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	-6	0	-6	0	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCGATCCTCCTCCTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	61551083	61575039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ES.2906.7	chr10	+	3996	9	NNC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1	junction_7	54.3747126429189	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551083	61574432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61570350_61571438_61572361
ES.29060.1	chr6	-	180	1	Intergenic	novelGene_24123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGACATTTACCAA	5392	False	NA	NA	False	NA	NA	NA	92021057	92020877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_92020900_92021100
ES.29061.1	chr6	+	7788	17	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	15.3112244366674	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGCTGCTCATCTT	NA	False	NA	14	True	ATTAAA	-16	NA	92068388	92150039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92129910_92129985_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.10	chr6	+	7701	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.9735608294208	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTATGTGTGCTGCTCAT	NA	False	NA	11	True	ATTAAA	-13	NA	92068432	92150036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92082262_92082347_92116760_92116872_92126584_92126786_92129295_92129399_92129910_92129985_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.11	chr6	+	7478	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	68	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.953255295211	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068438	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439_92146976_92147075
ES.29061.12	chr6	+	7637	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	13.3226623965832	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	13	True	ATTAAA	-15	NA	92068441	92150038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134409_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.13	chr6	+	7619	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	163	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.8512530174186	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGCTGCTCATCTT	NA	False	NA	14	True	ATTAAA	-16	NA	92068533	92150039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129453_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138897_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.14	chr6	+	7656	14	NIC	ENSMUSG00000005893.15	novel	2368	15	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.4230218204732	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92069392	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92069796_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.15	chr6	+	1954	12	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	57238	-230	3944	230	3prime_fragment	FALSE	canonical	3	37	junction_1	6.32978006746517	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAGTATGTGTAAATA	NA	False	NA	NA	False	ATTAAA	-8	NA	92126651	92144916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.2	chr6	+	7632	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	18	-3	18	3	multi-exon	FALSE	canonical	3	17	junction_1	9.34732309164457	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGCTGCTCATCTTTT	NA	False	NA	16	True	ATTAAA	-18	NA	92068388	92150041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.3	chr6	+	7585	14	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.4230218204732	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068391	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92068724_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.4	chr6	+	7699	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	15.9368197022562	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068391	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92129910_92129985_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.5	chr6	+	7710	16	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	9.13503633757901	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	13	True	ATTAAA	-15	NA	92068391	92150038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.6	chr6	+	10788	14	ISM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	25	-1	25	1	intron_retention	FALSE	canonical	3	17	junction_1	9.67030469527244	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTGCTGCTCATCTT	NA	False	NA	14	True	ATTAAA	-16	NA	92068395	92150039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168
ES.29061.7	chr6	+	7582	15	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	13.774606924278	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068396	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140202_92141168_92141275_92144439
ES.29061.8	chr6	+	7446	13	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	26	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.0714246502286	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068396	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92068724_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29061.9	chr6	+	7693	16	NNC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.2839083940767	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATGTGTGCTGCTCATC	NA	False	NA	12	True	ATTAAA	-14	NA	92068399	92150037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92068724_92082262_92082347_92115975_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ES.29062.1	chr6	+	1522	1	Intergenic	novelGene_24125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92152914	92154436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_92152900_92154400
ES.29063.1	chr6	-	1831	1	Antisense	novelGene_ENSMUSG00000005893.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATCTTGGTTTATAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	92069170	92067339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_92067300_92069200
ES.29063.2	chr6	-	1273	1	Antisense	novelGene_ENSMUSG00000005893.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTTGCAGTAGACAT	NA	False	NA	NA	False	AATAAA	-7	NA	92069056	92067783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_92067800_92069100
ES.29064.1	chr6	-	3611	1	Intergenic	novelGene_24124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	92102790	92099179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_92099200_92102800
ES.29065.1	chr6	-	6241	2	Genic_Genomic	ENSMUSG00000108199.2	novel	1805	1	NA	NA	-3145	2411	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92126419	92119058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_92124811_92125930
ES.29066.1	chr6	-	1637	1	Antisense	novelGene_ENSMUSG00000005893.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-41	NA	92135597	92133960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_92134000_92135600
ES.29067.1	chr6	-	4484	13	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-11	19695	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.4839195932796	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92191841	92143997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92144037_92164516_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.11	chr6	-	766	4	NNC	ENSMUSG00000014551.9	novel	6073	4	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	390.569669414647	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTAAGTGTGGCCTTG	NA	False	NA	-7	True	AATAAA	-18	NA	92160969	92151816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92152190_92152640_92152778_92155690_92155798_92160820
ES.29067.12	chr6	-	175	1	Intergenic	novelGene_24126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATATAGACATAAAG	NA	False	NA	NA	False	NA	NA	NA	92162215	92162040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_92162000_92162200
ES.29067.13	chr6	-	5347	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	-12	-1	-12	1	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGCTTAAAACGTC	NA	False	NA	2	True	ATTAAA	-25	NA	92191918	92163691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.14	chr6	-	6508	9	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-5485	0	intron_retention	FALSE	canonical	3	93	junction_1	17.1591812158972	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92184094	92163692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167440_92168229_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025
ES.29067.15	chr6	-	5271	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	35.6024885377784	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTGTGTGCTTAAAAC	NA	False	NA	-1	True	ATTAAA	-22	NA	92191851	92163694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178609_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.17	chr6	-	5148	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	46.8891782965144	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTGTGTGTGCTTAAAA	NA	False	NA	-2	True	ATTAAA	-21	NA	92191847	92163695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178609_92178712_92178759_92179550_92179652_92184025_92184167_92188686_92188883_92191691
ES.29067.18	chr6	-	5072	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	47.7938064385365	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	-7	True	ATTAAA	-44	NA	92191851	92163700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188561_92188883_92191691
ES.29067.19	chr6	-	5264	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8828119074671	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGACTTGTGTGTGCT	NA	False	NA	-7	True	ATTAAA	-44	NA	92191829	92163700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168214_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.2	chr6	-	853	5	NNC	ENSMUSG00000014551.9	novel	6073	4	NA	NA	-17	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	359.025416927548	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGATGCCTTTTG	NA	False	NA	NA	False	ACTAAA	-29	NA	92160969	92145687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92145819_92151811_92152190_92152689_92152778_92155690_92155798_92160820
ES.29067.20	chr6	-	5276	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	37.5895624690095	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGGACTTGTGTGTGC	NA	False	NA	-8	True	ATTAAA	-43	NA	92191850	92163701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188561_92188883_92191691
ES.29067.21	chr6	-	5153	11	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-8	-10	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	38.6600569063213	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGGACTTGTGTGTG	NA	False	NA	-9	True	ATTAAA	-42	NA	92191838	92163702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167440_92168229_92168335_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.22	chr6	-	5202	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.1051177665153	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGGACTTGTGTGTG	NA	False	NA	-9	True	ATTAAA	-42	NA	92191841	92163702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178558_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.23	chr6	-	5050	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-8	-10	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	36.6012690020713	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGGACTTGTGTGTG	NA	False	NA	-9	True	ATTAAA	-42	NA	92191838	92163702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.24	chr6	-	5342	13	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-14	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.5536578106979	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGCTGGACTTGTGTGT	NA	False	NA	-10	True	ATTAAA	-41	NA	92191844	92163703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92178951_92179033_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.25	chr6	-	4651	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	66	617	-10	-617	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCCAGAGGGTTTCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	92191840	92164309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.26	chr6	-	4476	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-10	-735	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.1051177665153	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92191840	92164427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178558_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.28	chr6	-	4564	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	35	735	35	-735	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92191871	92164427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.29	chr6	-	4337	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-735	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	36.6012690020713	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92191850	92164427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.3	chr6	-	10253	2	FSM	ENSMUSG00000014551.9	ENSMUST00000134132.2	636	2	-11	-9606	-11	818	multi-exon	FALSE	canonical	3	845	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGATGCCTTTTG	NA	False	NA	NA	False	ACTAAA	-29	NA	92160963	92145687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92155798_92160820
ES.29067.30	chr6	-	3570	11	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-5476	-735	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.040491800181	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92184085	92164427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92166309_92166727_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025
ES.29067.31	chr6	-	6980	10	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-785	intron_retention	FALSE	canonical	3	92	junction_8	18.732687480629	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92191850	92164477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167440_92168229_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ES.29067.32	chr6	-	4500	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-785	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	37.5895624690095	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92191850	92164477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188561_92188883_92191691
ES.29067.33	chr6	-	4375	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	-20	-785	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	37.5895624690095	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92191850	92164477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188686_92188883_92191691
ES.29067.4	chr6	-	1874	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	51	4148	-11	1165	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGTCCTGACCCTT	NA	False	NA	-2	True	AATAAA	-33	NA	92160963	92150653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ES.29067.5	chr6	-	4312	4	NNC	ENSMUSG00000014551.9	novel	6073	4	NA	NA	-22	721	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	398.336820068422	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGACTCTTTAGATG	NA	False	NA	-2	True	AATAAA	-18	NA	92160974	92151097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92152190_92152640_92152778_92152868_92155798_92160820
ES.29067.6	chr6	-	1416	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	60	4597	-2	716	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCCAAGACTCTTT	NA	False	NA	-7	True	AATAAA	-13	NA	92160954	92151102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ES.29067.7	chr6	-	1255	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	-7	4825	-7	488	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACTCTCAATTCTTG	NA	False	NA	NA	False	AATGAA	-18	NA	92161021	92151330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ES.29067.8	chr6	-	724	4	NNC	ENSMUSG00000014551.9	novel	6073	4	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	386.865178927578	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTGTGGCCTTGCTGG	NA	False	NA	-3	True	AATAAA	-22	NA	92160978	92151812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92152190_92152689_92152778_92155690_92155798_92160826
ES.29067.9	chr6	-	776	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	-14	5311	-14	2	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTAAGTGTGGCCTTG	NA	False	NA	-7	True	AATAAA	-18	NA	92161028	92151816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ES.29068.1	chr6	-	1478	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	-95	1	-95	-1	multi-exon	FALSE	canonical	3	80	junction_1	3.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGCTTTGCTCTTCT	NA	False	NA	-14	True	AATAAA	-14	NA	92221726	92219042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92220107_92220652_92220869_92221528
ES.29069.1	chr6	+	1102	1	Intergenic	novelGene_24127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTTCAAACCTGAAGC	NA	False	NA	NA	False	AATAAA	-14	NA	92431597	92432699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_92431600_92432700
ES.2907.1	chr10	+	180	1	Intergenic	novelGene_2232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGATGTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	61608619	61608799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61608600_61608800
ES.29070.1	chr6	-	7930	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-51	-19	-51	17	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGCTCTTGTTCCAGA	NA	False	NA	1	True	AATAAA	-34	NA	92511893	92347871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
ES.29070.2	chr6	-	8200	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	-16	-4476	-16	0	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCATTCTTCTCAGTC	NA	False	NA	-16	True	AATAAA	-17	NA	92458389	92347888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ES.29070.3	chr6	-	7746	8	NNC	ENSMUSG00000030020.14	novel	3708	8	NA	NA	443	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9.2228642237537	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTTGTCATTCTTCTC	NA	False	NA	-20	True	AATAAA	-13	NA	92457930	92347892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399459_92402560_92402675_92435455_92435640_92457805
ES.29070.4	chr6	-	4955	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-52	2957	-52	1517	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAGCACTGTGCCACTC	NA	False	NA	NA	False	AATAAA	-30	NA	92511894	92350847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
ES.29070.5	chr6	-	5213	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	1	-1506	1	1506	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGATAAATATGCAGCA	NA	False	NA	NA	False	AATAAA	-19	NA	92458372	92350858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ES.29070.6	chr6	-	5034	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	1	-1327	1	1327	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATACAACATTTGTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	92458372	92351037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ES.29070.7	chr6	-	3393	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	-7	4474	-7	0	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTTTGGTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-36	NA	92511849	92352364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
ES.29070.8	chr6	-	3673	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	26	9	26	-9	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTCAACTTGGTTTG	NA	False	NA	NA	False	AGTAAA	-27	NA	92458347	92352373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ES.29070.9	chr6	-	3592	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	1	115	1	-115	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAACAGAATTTCTAT	NA	False	NA	NA	False	GATAAA	-18	NA	92458372	92352479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ES.29071.1	chr6	+	2753	1	Intergenic	novelGene_24128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAGCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92647686	92650439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_92647700_92650400
ES.29072.1	chr6	+	852	5	NNC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	-61	-4764	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAGAAATAAGATT	NA	False	NA	NA	False	NA	NA	NA	92793397	92815682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92793642_92804897_92805085_92808917_92809046_92811419_92811468_92815437
ES.29072.2	chr6	+	5721	2	ISM	ENSMUSG00000048636.8	ENSMUST00000133858.2	2079	5	9857	-6	9857	6	3prime_fragment	FALSE	canonical	1	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTCTGAATGATTGCTC	NA	False	NA	NA	False	AATAAA	-23	NA	92814469	92824161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_92818970_92822940
ES.29072.3	chr6	+	1501	3	NNC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	12980	-23	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAATCAGAA	1099	False	NA	NA	False	NA	NA	NA	92817592	92824132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92817686_92818753_92818970_92822940
ES.29072.4	chr6	+	1792	2	NNC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	13004	30	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTACTCAGATTGGTGA	1123	False	NA	NA	False	TTTAAA	-31	NA	92817616	92820476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92817686_92818753
ES.29072.5	chr6	+	2731	1	NIC	ENSMUSG00000048636.8	novel	2239	5	NA	NA	13059	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAACAAATAAATGA	1178	False	NA	NA	False	GATAAA	-29	NA	92817671	92820402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_92817700_92820400
ES.29072.6	chr6	+	5156	1	Genic_Genomic	ENSMUSG00000048636.8	novel	NA	NA	NA	NA	14388	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAAGAGTCTGAATGAT	2507	False	NA	NA	False	AATAAA	-18	NA	92819000	92824156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_92819000_92824200
ES.29073.1	chr6	+	1693	4	NNC	ENSMUSG00000097462.8	novel	873	4	NA	NA	0	-122787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTGGTATCTGCTGCC	NA	False	NA	NA	False	AATAAA	-23	NA	92917562	92965660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92917791_92937430_92937583_92962430_92962533_92964449
ES.29073.2	chr6	+	1385	6	NNC	ENSMUSG00000097462.8	novel	2142	10	NA	NA	82	-33907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.8	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGATAAAAAATATTGAC	NA	False	NA	NA	False	AGTAAA	-7	NA	92917644	93215963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_92917791_93084047_93084141_93130787_93130955_93169089_93169185_93214954_93215026_93215150
ES.29074.1	chr6	-	8053	40	FSM	ENSMUSG00000030022.15	ENSMUST00000113438.8	8016	40	-38	1	-38	-1	multi-exon	FALSE	canonical	2	6	junction_11	5.38656863230259	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCTTCTCTTGGCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	92920511	92749680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.10	chr6	-	7305	39	NIC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	-32	-572	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	5.60723958236778	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGACTCCTGTCAATCA	NA	False	NA	NA	False	NA	NA	NA	92920505	92750254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.11	chr6	-	5927	39	NNC	ENSMUSG00000030022.15	novel	2541	14	NA	NA	198	7744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.27288055608539	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGTTCATGTCTCAA	NA	False	NA	NA	False	AATAAA	-12	NA	92920275	92762246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92762360_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871337_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.12	chr6	-	3536	1	Intergenic	novelGene_24129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTTATGCAGAATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	92799281	92795745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_92795700_92799300
ES.29074.13	chr6	-	4366	12	ISM	ENSMUSG00000030022.15	ENSMUST00000167391.2	6033	30	20781	48146	-20505	24746	internal_fragment	FALSE	canonical	3	10	junction_1	4.62833529503922	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAACCAAAC	2860	False	NA	NA	False	AAGAAA	-38	NA	92857641	92797828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600
ES.29074.14	chr6	-	9967	1	Antisense	novelGene_ENSMUSG00000048636.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTTCTATGTATTCA	4058	False	NA	NA	False	NA	NA	NA	92812587	92802620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_92802600_92812600
ES.29074.15	chr6	-	8566	28	NNC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	-38	149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	4.93913572686508	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTGTGTTCGGTAGCT	NA	False	NA	NA	False	GATAAA	-18	NA	92920511	92822425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886967_92889599_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.16	chr6	-	4119	3	NNC	ENSMUSG00000030022.15	novel	4519	5	NA	NA	2238	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCATTTTGAAAGGTTA	NA	False	NA	NA	False	ATTAAA	-25	NA	92834888	92822506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92826450_92831184_92831339_92834866
ES.29074.18	chr6	-	8543	28	ISM	ENSMUSG00000030022.15	ENSMUST00000113438.8	8016	40	-208	72939	-208	-44	5prime_fragment	FALSE	canonical	2	7	junction_14	4.31795307904879	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	ATTAAA	-19	NA	92920681	92822618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.19	chr6	-	642	1	ISM	ENSMUSG00000030022.15	ENSMUST00000130314.2	4519	5	13755	165	8232	-165	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTTCATAAGCAATG	NA	False	NA	NA	False	AATAAA	-22	NA	92823381	92822739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_92822700_92823400
ES.29074.2	chr6	-	7434	38	NIC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	328	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_34	5.87687150614856	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGCTTCTCTTGGCTTC	NA	False	NA	NA	False	AATAAA	-23	NA	92920145	92749681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.20	chr6	-	3329	12	ISM	ENSMUSG00000030022.15	ENSMUST00000167391.2	6033	30	20516	75139	20516	-2247	internal_fragment	FALSE	canonical	3	12	junction_1	4.27176004526208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGGTTTTAATCCTTA	2595	False	NA	NA	False	AATAAA	-14	NA	92857906	92824821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816
ES.29074.3	chr6	-	8221	38	NIC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	-549	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	5.7458976377924	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGCTTCTCTTGGCTTC	NA	False	NA	NA	False	AATAAA	-23	NA	92921022	92749681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.5	chr6	-	3183	11	NNC	ENSMUSG00000030022.15	novel	6033	30	NA	NA	37987	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.02745289615579	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATGCTTCTCTTGGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	92793626	92749682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793433
ES.29074.6	chr6	-	7520	39	NIC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	319	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	5.66223823485509	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATGCTTCTCTTGGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	92920154	92749682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.7	chr6	-	7841	39	NIC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	5.60723958236778	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATAGATGCTTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	92920474	92749687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29074.8	chr6	-	3474	13	NNC	ENSMUSG00000030022.15	novel	6033	30	NA	NA	4020	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	8.49959149345164	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATAGATGCTTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	92827593	92749687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92826272_92826450_92827455
ES.29074.9	chr6	-	7887	40	NNC	ENSMUSG00000030022.15	novel	8016	40	NA	NA	-40	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	5.8647926000794	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACCATAGATGCTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	92920513	92749689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826352_92831245_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ES.29075.1	chr6	-	1386	1	Antisense	novelGene_ENSMUSG00000097462.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACATGAGTTGCTAA	NA	False	NA	NA	False	NA	NA	NA	92996861	92995475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_92995500_92996900
ES.29076.1	chr6	-	5534	1	Intergenic	novelGene_24130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGAGCTATCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	93045508	93039974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_93040000_93045500
ES.29077.1	chr6	-	156	1	Intergenic	novelGene_24131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	93091719	93091563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_93091600_93091700
ES.29078.1	chr6	+	4121	1	Intergenic	novelGene_24132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATCTCGTTAGATGCA	NA	False	NA	NA	False	NA	NA	NA	93353750	93357871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_93353800_93357900
ES.29079.1	chr6	+	222	1	Intergenic	novelGene_24133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGATCGGCTTATAC	NA	False	NA	NA	False	NA	NA	NA	93529364	93529586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_93529400_93529600
ES.2908.1	chr10	+	1075	2	Antisense	novelGene_ENSMUSG00000020086.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	61619016	61620559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61619413_61619880
ES.2908.2	chr10	+	1333	1	Antisense	novelGene_ENSMUSG00000020086.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	61619226	61620559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61619200_61620600
ES.29080.1	chr6	-	7086	24	NNC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-36788	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	12.512375726208	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTCTGGATTGGTAT	NA	False	NA	NA	False	AATACA	-27	NA	93927459	93652433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737745_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_93927305
ES.29080.10	chr6	-	5741	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	-23	-1239	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	11.5070944699562	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGTTGCCTTTTTTTT	3828	False	NA	NA	False	AATAGA	-22	NA	93889508	93653674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93889343
ES.29080.12	chr6	-	4344	22	NIC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-54	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	11.220324933351	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTTTGAAAATTATT	3797	False	NA	0	True	ATTAAA	-20	NA	93889539	93655015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685199_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93889343
ES.29080.13	chr6	-	3398	15	NNC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	37299	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	12.1797758097393	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	NA	False	NA	-1	True	ATTAAA	-19	NA	93732221	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93732145
ES.29080.14	chr6	-	4653	23	NNC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.9531897217227	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	2646	False	NA	-1	True	ATTAAA	-19	NA	93890690	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694151_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.15	chr6	-	4219	22	NNC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	10.4766233676795	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	3079	False	NA	-1	True	ATTAAA	-19	NA	93890257	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890152
ES.29080.16	chr6	-	4263	23	NIC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-135	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	12.4744366705649	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	2964	False	NA	-1	True	ATTAAA	-19	NA	93890372	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685199_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.17	chr6	-	4501	22	NNC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.0249174407055	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	2642	False	NA	-1	True	ATTAAA	-19	NA	93890694	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746522_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.18	chr6	-	4610	23	FSM	ENSMUSG00000045095.17	ENSMUST00000093769.8	4598	23	-12	0	-12	0	multi-exon	FALSE	canonical	0	0	junction_22	12.2754205798915	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	2653	False	NA	-1	True	ATTAAA	-19	NA	93890683	93655016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685199_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.19	chr6	-	4395	23	NNC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	12.8690159005238	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACTTTTTTTGAAAATT	3797	False	NA	-3	True	ATTAAA	-17	NA	93889539	93655018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746528_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93889343
ES.29080.2	chr6	-	6952	22	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	10.1806806503004	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGCTTCTGGATTGGT	2811	False	NA	NA	False	AATACA	-25	NA	93890525	93652435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.20	chr6	-	4200	23	NNC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	123	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.7769323391806	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACTTTTTTTGAAAATT	2924	False	NA	-3	True	ATTAAA	-17	NA	93890412	93655018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676733_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.22	chr6	-	3624	1	NIC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	106876	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTATGCCCTAGATGT	NA	False	NA	NA	False	TTTAAA	-32	NA	93662644	93659020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93659000_93662600
ES.29080.23	chr6	-	4360	22	NNC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	-132	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	11.9678329259441	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCTATGCCCTAGATGT	2967	False	NA	NA	False	TTTAAA	-32	NA	93890369	93659020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890152
ES.29080.26	chr6	-	3250	3	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	167577	24069	46562	-22536	internal_fragment	FALSE	canonical	3	28	junction_1	1	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93722958	93682527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_93685202_93694220_93694253_93722414
ES.29080.27	chr6	-	2035	5	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	-148	91085	-12	1053	5prime_fragment	FALSE	canonical	0	0	junction_4	18.0468141232739	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGTTCAAGTGGAAAT	2653	False	NA	NA	False	AATAAA	-28	NA	93890683	93749543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.28	chr6	-	4498	6	NNC	ENSMUSG00000045095.17	novel	322	3	NA	NA	-29542	3960	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.8856732347688	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATATTAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	93920213	93758323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_93759859_93759966_93760130_93760183_93762628_93769327_93769535_93792686_93792807_93920184
ES.29080.29	chr6	-	3342	1	Intergenic	novelGene_24134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCTTCTTTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	93818617	93815275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_93815300_93818600
ES.29080.3	chr6	-	3537	6	ISM	ENSMUSG00000045095.17	ENSMUST00000093769.8	4598	23	219573	-2022	98422	-559	3prime_fragment	FALSE	canonical	3	29	junction_5	4.57820925690384	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATGGATTCATTCCCT	7836	False	NA	NA	False	NA	NA	NA	93671098	93652994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988
ES.29080.4	chr6	-	5046	16	ISM	ENSMUSG00000045095.17	ENSMUST00000089317.12	7209	24	525593	992	34810	-992	3prime_fragment	FALSE	canonical	3	7	junction_10	10.3850319637875	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTTCTTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	93734710	93653427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635
ES.29080.5	chr6	-	4722	13	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	45273	-992	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	7.34988662044071	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTTCTTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	93724247	93653427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172
ES.29080.6	chr6	-	6025	23	NIC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-49	-1067	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	11.5070944699562	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCTTTAGTTTGTTGG	2752	False	NA	NA	False	ACTAAA	-41	NA	93890584	93653502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.7	chr6	-	5946	22	NIC	ENSMUSG00000045095.17	novel	4598	23	NA	NA	-45	-1197	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	10.1806806503004	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCTAGCTGTGGAGAA	2620	False	NA	NA	False	TATAAA	-15	NA	93890716	93653632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ES.29080.8	chr6	-	5287	21	ISM	ENSMUSG00000045095.17	ENSMUST00000089317.12	7209	24	490927	1214	144	-1214	3prime_fragment	FALSE	canonical	3	7	junction_10	10.1265739517371	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAATTTATGACAGA	259	False	NA	NA	False	AAAACA	-28	NA	93769376	93653649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671157_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327
ES.29081.1	chr6	+	3378	1	Intergenic	novelGene_24136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGCAAATGCTAATGCT	NA	False	NA	NA	False	NA	NA	NA	94002472	94005850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94002500_94005800
ES.29082.1	chr6	-	7178	2	Intergenic	novelGene_24135	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAAGAGGCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	94010147	93995504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94000356_94007820
ES.29083.1	chr6	+	935	1	Intergenic	novelGene_24137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94020726	94021661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94020700_94021700
ES.29084.1	chr6	+	5974	1	Intergenic	novelGene_24138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTAGCCATGTGGGCAGA	166	False	NA	NA	False	NA	NA	NA	94130819	94136793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94130800_94136800
ES.29085.1	chr6	+	151	1	Intergenic	novelGene_24139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	94165587	94165738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94165600_94165700
ES.29086.1	chr6	+	3237	1	Intergenic	novelGene_24140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGTAGTGATCCAGCA	3288	False	NA	NA	False	NA	NA	NA	94225244	94228481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94225200_94228500
ES.29086.2	chr6	+	5276	1	Intergenic	novelGene_24141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGTTAATATAAATTAAGA	3288	False	NA	NA	False	NA	NA	NA	94225244	94230520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94225200_94230500
ES.29087.1	chr6	-	1925	1	Intergenic	novelGene_24142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTACGAAAGTCCCCTG	4653	False	NA	NA	False	NA	NA	NA	94236677	94234752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94234800_94236700
ES.29087.2	chr6	-	4263	1	Intergenic	novelGene_24143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	1765	False	NA	NA	False	AGTAAA	-41	NA	94239565	94235302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94235300_94239600
ES.29088.1	chr6	-	2602	1	Intergenic	novelGene_24144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTTTGGAAGCAAAGAG	4064	False	NA	NA	False	AAAAAG	-5	NA	94247412	94244810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94244800_94247400
ES.29088.2	chr6	-	12932	2	Genic_Genomic	ENSMUSG00000045095.17	novel	7209	24	NA	NA	-1	-134926	multi-exon	TRUE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	94260877	94244829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_94246841_94249956
ES.29088.3	chr6	-	4332	1	Intergenic	novelGene_24145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94252535	94248203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94248200_94252500
ES.29088.4	chr6	-	4893	1	Intergenic	novelGene_24146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCTCGAACAATCACC	NA	False	NA	NA	False	NA	NA	NA	94257657	94252764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94252800_94257700
ES.29089.1	chr6	-	209	1	Intergenic	novelGene_24147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAGCTGCCTTATTA	NA	False	NA	NA	False	NA	NA	NA	94269968	94269759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94269800_94270000
ES.2909.1	chr10	-	146	1	Intergenic	novelGene_2231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	61569342	61569196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61569200_61569300
ES.29090.1	chr6	+	163	1	Intergenic	novelGene_24148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACAGCAG	NA	False	NA	NA	False	NA	NA	NA	94270758	94270921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94270800_94270900
ES.29091.1	chr6	-	177	1	Intergenic	novelGene_24149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAATAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	94340276	94340099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94340100_94340300
ES.29092.1	chr6	+	242	1	Intergenic	novelGene_24150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTTGAGACAAGGTTC	NA	False	NA	NA	False	NA	NA	NA	94391855	94392097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94391900_94392100
ES.29093.1	chr6	+	1314	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	-7	615	-7	3	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGCATGCATTCTTTC	NA	False	NA	NA	False	AAAAAG	-14	NA	94477304	94581038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.10	chr6	+	453	2	NNC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	23784	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGCATCCTGTGCTT	NA	False	NA	NA	False	AATAAA	-41	NA	94578954	94580852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_94579088_94580532
ES.29093.2	chr6	+	1904	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	-4	22	-4	-22	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAATACTTCCTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	94477307	94581631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.3	chr6	+	1052	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCAGGCCCTTCAGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	94477311	94580828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.4	chr6	+	1048	6	ISM	ENSMUSG00000045100.12	ENSMUST00000204235.3	2076	10	-30	68632	6	25183	5prime_fragment	FALSE	canonical	0	0	junction_4	19.0431089898682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAAGCTGTTGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	94477319	94513021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_94477439_94484494_94484652_94487732_94487843_94490785_94491023_94511124_94511230_94512701
ES.29093.5	chr6	+	1820	9	NIC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	-3	-22	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	12.2983738762488	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAATACTTCCTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	94477346	94581631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.6	chr6	+	1034	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	63	825	25	-15	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCAGGCCCTTCAGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	94477374	94580828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.7	chr6	+	2082	2	Intergenic	novelGene_24151	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAGAAAACCCAACCAA	2419	False	NA	NA	False	NA	NA	NA	94502811	94504970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94504630_94504706
ES.29093.8	chr6	+	4380	5	NNC	ENSMUSG00000045100.12	novel	1922	10	NA	NA	9684	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3031859428029	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATGCTTTTTATTAGC	NA	False	NA	NA	False	AATAAA	-30	NA	94564854	94580841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_94568717_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ES.29093.9	chr6	+	4092	3	ISM	ENSMUSG00000045100.12	ENSMUST00000203484.2	381	5	16533	-265	16533	-15	3prime_fragment	FALSE	canonical	3	32	junction_1	3	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCAGGCCCTTCAGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	94571703	94580828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_94575426_94576159_94576234_94580532
ES.29094.1	chr6	-	3890	1	Intergenic	novelGene_24152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGGGAGATTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	94535871	94531981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94532000_94535900
ES.29095.1	chr6	-	8854	2	Antisense	novelGene_ENSMUSG00000045100.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	94569208	94560223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_94561293_94561423
ES.29095.2	chr6	-	8484	3	Antisense	novelGene_ENSMUSG00000045100.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94569208	94560269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_94561336_94561467_94567960_94568282
ES.29096.1	chr6	-	5124	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	-166	-7	-145	0	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	6594	False	NA	NA	False	AATAAA	-21	NA	94677284	94581509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.10	chr6	-	4958	19	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	170	2	intron_retention	FALSE	canonical	1	1	junction_18	30.6082878310862	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGCGGCGGTCAC	6930	False	NA	NA	False	AATAAA	-18	NA	94676948	94581512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676269
ES.29096.12	chr6	-	4032	16	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	22502	2	intron_retention	FALSE	canonical	0	0	junction_15	40.9514617837047	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGTGCGGCGGTCAC	NA	False	NA	NA	False	AATAAA	-18	NA	94610004	94581512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94609957
ES.29096.14	chr6	-	5064	8	ISM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	84538	-3	-10206	1	3prime_fragment	FALSE	canonical	3	98	junction_7	19.6281763320602	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGCGGCGGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	94592580	94581513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544
ES.29096.15	chr6	-	6856	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-10	1	intron_retention	FALSE	canonical	3	92	junction_13	16.0224755635136	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGTGCGGCGGTCA	6729	False	NA	NA	False	AATAAA	-17	NA	94677149	94581513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.16	chr6	-	11664	16	NNC	ENSMUSG00000030029.15	novel	4831	20	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_2	32.784549206397	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTGTGTGCGGCGGTC	6730	False	NA	NA	False	AATAAA	-16	NA	94677148	94581514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583583_94583646_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.2	chr6	-	4631	18	NIC	ENSMUSG00000030029.15	novel	4849	20	NA	NA	252	0	intron_retention	FALSE	canonical	0	0	junction_16	31.6615973602856	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	7012	False	NA	NA	False	AATAAA	-21	NA	94676866	94581509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94640907_94640980_94676442
ES.29096.20	chr6	-	4268	17	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	7858	-2	intron_retention	FALSE	canonical	1	1	junction_16	32.4243711388517	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	NA	False	NA	NA	False	AATAAA	-12	NA	94624648	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94624506
ES.29096.21	chr6	-	4567	19	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-12	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	27.8433115846517	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	6727	False	NA	NA	False	AATAAA	-12	NA	94677151	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582798_94583311_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.22	chr6	-	6146	17	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	92	junction_12	16.9701023862557	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	6707	False	NA	NA	False	AATAAA	-12	NA	94677171	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94584272_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.23	chr6	-	9403	17	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-33	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	31.799604459018	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	6706	False	NA	NA	False	AATAAA	-12	NA	94677172	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583583_94583646_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.24	chr6	-	1174	5	NNC	ENSMUSG00000030029.15	novel	4849	20	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.7414913885186	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	6735	False	NA	NA	False	AATAAA	-12	NA	94677143	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94581761_94607136_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.25	chr6	-	5070	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	92	junction_13	11.2968746634912	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAAGTGTGTGCGGC	6738	False	NA	NA	False	AATAAA	-12	NA	94677140	94581518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.26	chr6	-	4208	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-31	-504	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	29.2854936514361	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCACTGCCTTTCGTCT	6708	False	NA	NA	False	NA	NA	NA	94677170	94582164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.27	chr6	-	3039	14	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-100	-4543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.3679603818149	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACATGGGATTGTCTTCT	6639	False	NA	NA	False	AATAAA	-23	NA	94677239	94586203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603354_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.28	chr6	-	167	1	Intergenic	novelGene_24153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTATTTAT	NA	False	NA	NA	False	NA	NA	NA	94613706	94613539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94613500_94613700
ES.29096.3	chr6	-	5000	20	FSM	ENSMUSG00000030029.15	ENSMUST00000204645.3	4849	20	-153	2	-153	-2	multi-exon	FALSE	canonical	1	5	junction_1	29.0418553622334	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6586	False	NA	NA	False	AATAAA	-19	NA	94677292	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_94581761_94581890_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.4	chr6	-	4891	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-40	-2	intron_retention	FALSE	canonical	0	0	junction_3	31.6485895103254	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6699	False	NA	NA	False	AATAAA	-19	NA	94677179	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.5	chr6	-	4877	18	NIC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	8	junction_2	29.2854936514361	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6692	False	NA	NA	False	AATAAA	-19	NA	94677186	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.6	chr6	-	5192	20	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_17	38.5521914830278	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6749	False	NA	NA	False	AATAAA	-19	NA	94677129	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94632226_94632452_94640907_94640980_94676442
ES.29096.7	chr6	-	5127	20	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-46	-2	intron_retention	FALSE	canonical	0	0	junction_18	38.5711559591123	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6693	False	NA	NA	False	AATAAA	-19	NA	94677185	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94643722_94643827_94676442
ES.29096.8	chr6	-	4388	20	NNC	ENSMUSG00000030029.15	novel	4951	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.9883633941263	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6738	False	NA	NA	False	AATAAA	-19	NA	94677140	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94581855_94582444_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29096.9	chr6	-	2507	14	NNC	ENSMUSG00000030029.15	novel	4849	20	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.6582107932293	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGCGGCGGTCACT	6693	False	NA	NA	False	AATAAA	-19	NA	94677185	94581511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_94581761_94588408_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ES.29097.1	chr6	-	179	1	Intergenic	novelGene_24154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	94688811	94688632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94688600_94688800
ES.29098.1	chr6	+	1977	1	Intergenic	novelGene_24155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTTCAGGGTCTGGAG	4482	False	NA	NA	False	NA	NA	NA	94726656	94728633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_94726700_94728600
ES.29099.1	chr6	-	1227	1	Intergenic	novelGene_24156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTATGGTGGTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	94732499	94731272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94731300_94732500
ES.291.1	chr1	+	4028	3	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGTCCTGACTCACAGG	7773	False	NA	NA	False	NA	NA	NA	36722323	36728081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36722575_36723749_36726260_36726814
ES.2910.1	chr10	-	2961	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	-3544	24	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	99.4508377833111	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTTATTGCGATATTT	NA	False	NA	-2	True	NA	NA	NA	61623470	61574419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561_61620556_61623337
ES.2910.10	chr10	-	1735	8	NIC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	208	-34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	115.224005435375	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAATGAGA	NA	False	NA	-60	True	NA	NA	NA	61619718	61574477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61589240_61589348_61593502_61593734_61619561
ES.2910.11	chr10	-	2026	10	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	237	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.708176800112	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAATGAGA	NA	False	NA	-60	True	NA	NA	NA	61619689	61574477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61575621_61575744_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ES.2910.12	chr10	-	1892	9	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	239	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.701686959485	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAATGAGA	NA	False	NA	-60	True	NA	NA	NA	61619687	61574477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576913_61577079_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ES.2910.13	chr10	-	111	1	Intergenic	novelGene_2233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTAGGGGAGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	61615102	61614991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61615000_61615100
ES.2910.2	chr10	-	3014	11	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	-3544	17	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	138.782707856563	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATAGCCCTTTATTGC	NA	False	NA	-9	True	NA	NA	NA	61623470	61574426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576154_61576215_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561_61620556_61623337
ES.2910.4	chr10	-	1959	9	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.900601981292	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619716	61574443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576913_61577089_61582411_61582496_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ES.2910.5	chr10	-	1935	9	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	230	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	106.202636502113	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619696	61574443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593724_61619561
ES.2910.6	chr10	-	2082	9	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	107.800452225397	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619842	61574443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585157_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ES.2910.8	chr10	-	3612	8	NIC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	201	-34	intron_retention	FALSE	canonical	3	267	junction_6	27.848716674349	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAATGAGA	NA	False	NA	-60	True	NA	NA	NA	61619725	61574477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ES.2910.9	chr10	-	5911	3	NNC	ENSMUSG00000020086.7	novel	2175	9	NA	NA	37926	-34	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1.5	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAATGAGA	NA	False	NA	-60	True	NA	NA	NA	61582000	61574477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61575242_61576154_61576215_61576913
ES.29100.1	chr6	-	178	1	Intergenic	novelGene_24157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATAGCCGGGTGT	NA	False	NA	NA	False	NA	NA	NA	94743744	94743566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_94743600_94743700
ES.29101.1	chr6	+	4769	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	104	-4	-36	4	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGTTAGTATTAACAAAAG	NA	False	NA	94	True	ATTAAA	-27	NA	95094824	95106775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
ES.29101.10	chr6	+	199	1	Intergenic	novelGene_24158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTGACTTAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	95101415	95101614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_95101400_95101600
ES.29101.2	chr6	+	4510	3	FSM	ENSMUSG00000030031.15	ENSMUST00000119582.3	4518	3	10	-2	10	2	multi-exon	FALSE	canonical	2	6	junction_1	31	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAGTTAGTATTAACAAA	NA	False	NA	92	True	ATTAAA	-25	NA	95094870	95106773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_95094956_95098719_95099829_95103457
ES.29101.3	chr6	+	4375	3	FSM	ENSMUSG00000030031.15	ENSMUST00000119582.3	4518	3	10	133	10	-133	multi-exon	FALSE	canonical	2	6	junction_1	31	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTGTTGTAAACTGAT	NA	False	NA	10	True	AATAAA	-20	NA	95094870	95106638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_95094956_95098719_95099829_95103457
ES.29101.4	chr6	+	4584	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	151	134	11	-134	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGTGTTGTAAACTGA	NA	False	NA	9	True	AATAAA	-19	NA	95094871	95106637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
ES.29101.5	chr6	+	5175	3	NIC	ENSMUSG00000030031.15	novel	4869	4	NA	NA	36	-66	intron_retention	FALSE	canonical	3	68	junction_2	3.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCATGTCATGTAGAAT	NA	False	NA	24	True	ATTAAA	-21	NA	95094896	95106705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_95095715_95098719_95099829_95103457
ES.29101.6	chr6	+	4732	5	NNC	ENSMUSG00000030031.15	novel	4869	4	NA	NA	37	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.7747997705554	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATGTCATGTAGAATG	NA	False	NA	25	True	ATTAAA	-22	NA	95094897	95106706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_95094956_95095503_95095715_95096472_95096578_95098719_95099829_95103457
ES.29101.7	chr6	+	4580	4	NNC	ENSMUSG00000030031.15	novel	4869	4	NA	NA	37	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8263539599263	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTCATGTCATGTAGAA	NA	False	NA	23	True	ATTAAA	-20	NA	95094897	95106704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_95094956_95095548_95095715_95098719_95099829_95103457
ES.29101.9	chr6	+	3809	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	190	870	50	-870	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTAGATTTATTCTGTT	NA	False	NA	NA	False	AATACA	-14	NA	95094910	95105901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
ES.29102.1	chr6	+	1265	2	NNC	ENSMUSG00000107900.2	novel	432	2	NA	NA	258	249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTTGATCATGGTA	NA	False	NA	NA	False	NA	NA	NA	95227539	95231745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_95227657_95230597
ES.29103.1	chr6	+	4995	1	Antisense	novelGene_ENSMUSG00000061838.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAGCAATATGGCTAA	8172	False	NA	NA	False	NA	NA	NA	95666233	95671228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_95666200_95671200
ES.29104.1	chr6	-	5603	11	NNC	ENSMUSG00000061838.8	novel	622	6	NA	NA	12	16759	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.578359442822	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTGACTGTCAACCT	NA	False	NA	NA	False	AATAAA	-14	NA	95695769	95433230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95437635_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.10	chr6	-	2680	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	-1078	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	230.435869603671	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCACAGTTCTTGTTTC	NA	False	NA	-8	True	AATAAA	-21	NA	95635527	95451123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95634968
ES.29104.11	chr6	-	2713	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	230.496442488816	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCCTCACAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	95695780	95451126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543992_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.12	chr6	-	2573	10	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	300.98558269069	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95695783	95451127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543992_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95695669
ES.29104.13	chr6	-	2349	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	286.922024135277	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95695768	95451127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95646064_95646198_95695669
ES.29104.14	chr6	-	2146	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	-470	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	232.092675455302	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95696251	95451127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95696222
ES.29104.15	chr6	-	6868	2	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	158785	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95462205	95451127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452530_95456739
ES.29104.16	chr6	-	2035	9	NIC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	253.80208824988	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	False	NA	-12	True	AATAAA	-17	NA	95695778	95451127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95632438_95632581_95695669
ES.29104.18	chr6	-	2830	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	-1080	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	322.508197089753	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGCCTCACAGTTCTT	NA	False	NA	-13	True	AATAAA	-16	NA	95635529	95451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95592790_95592944_95632438_95632581_95634968
ES.29104.19	chr6	-	1972	9	NIC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	244.574854339116	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGCCTCACAGTTCTT	NA	False	NA	-13	True	AATAAA	-16	NA	95695768	95451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.2	chr6	-	2376	11	NNC	ENSMUSG00000061838.8	novel	622	6	NA	NA	3	13523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.578359442822	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGCTGTGATGTTATG	NA	False	NA	NA	False	AATAAA	-14	NA	95695778	95436466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95437635_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.21	chr6	-	2371	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	285.651235073776	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGCCTCACAGTTCTT	NA	False	NA	-13	True	AATAAA	-16	NA	95695771	95451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95592790_95592944_95632438_95632581_95695669
ES.29104.22	chr6	-	2738	10	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	-1295	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	339.455773587992	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGCCTCACAGTTCTT	NA	False	NA	-13	True	AATAAA	-16	NA	95635744	95451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95622374_95622412_95632438_95632581_95634968
ES.29104.23	chr6	-	5179	1	Intergenic	novelGene_24159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTCTATAGATTGGT	NA	False	NA	NA	False	NA	NA	NA	95529750	95524571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_95524600_95529800
ES.29104.24	chr6	-	4207	1	Intergenic	novelGene_24160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGAGTTTTTGTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	95529174	95524967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_95525000_95529200
ES.29104.25	chr6	-	4551	1	Intergenic	novelGene_24161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTAGCTTTTCTTTAA	NA	False	NA	NA	False	AGTAAA	-41	NA	95601521	95596970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_95597000_95601500
ES.29104.3	chr6	-	4181	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	1	-815	1	815	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTATACATTTATAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	95695780	95449174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.4	chr6	-	2914	2	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	163879	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTAGTGTGGGGTGTG	NA	False	NA	-5	True	ATTAAA	-19	NA	95457111	95449987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452530_95456739
ES.29104.5	chr6	-	3431	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	288.025882675341	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTCAGTAGTGTGGGG	NA	False	NA	-9	True	ATTAAA	-15	NA	95695780	95449991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95670032_95670100_95695669
ES.29104.6	chr6	-	3418	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	-54	3	-54	-3	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTCAGTAGTGTGGG	NA	False	NA	-10	True	ATTAAA	-14	NA	95695835	95449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.8	chr6	-	2303	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	-61	1125	-61	8	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGTTTCTGTCTGTTA	NA	False	NA	1	True	AATAAA	-30	NA	95695842	95451114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29104.9	chr6	-	2317	12	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	291.548558534374	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCACAGTTCTTGTTTC	NA	False	NA	-8	True	AATAAA	-21	NA	95695769	95451123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_95452146_95474577_95474699_95491248_95491345_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ES.29105.1	chr6	-	2264	7	NNC	ENSMUSG00000046500.9	novel	2190	6	NA	NA	14639	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.71558280160133	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTGTGATTATTTAT	NA	False	NA	-30	True	AGTAAA	-24	NA	97022715	96808165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_96809534_96820711_96820837_96840720_96840877_96991332_96991449_96996875_96997012_97021594_97021728_97022485
ES.29105.2	chr6	-	1702	4	NNC	ENSMUSG00000046500.9	novel	2190	6	NA	NA	182874	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.85861230093008	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATCTTGTGATTATTT	NA	False	NA	-32	True	AGTAAA	-22	NA	96854480	96808167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_96809534_96820711_96820837_96840720_96840877_96854425
ES.29105.3	chr6	-	1810	4	NNC	ENSMUSG00000046500.9	novel	2190	6	NA	NA	117381	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.85861230093008	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATCTTGTGATTATTT	NA	False	NA	-32	True	AGTAAA	-22	NA	96919973	96808167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_96809534_96820711_96820837_96840720_96840877_96919810
ES.29106.1	chr6	+	1930	1	Intergenic	novelGene_24162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97099370	97101300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97099400_97101300
ES.29107.1	chr6	+	1907	1	Intergenic	novelGene_24163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	97113974	97115881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97114000_97115900
ES.29108.1	chr6	-	4191	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	241	-8	-14	8	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCAGGATTTTCTGTG	NA	False	NA	2	True	AATAAA	-30	NA	97125902	97086976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29108.11	chr6	-	3928	18	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	12.1714965686116	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATCTGAACATCTTCA	NA	False	NA	-10	True	AATAAA	-18	NA	97125901	97086988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97124970_97125792
ES.29108.12	chr6	-	4071	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	182	171	-73	-171	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGGATTAACTTTTTT	NA	False	NA	NA	False	TATAAA	-22	NA	97125961	97087155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29108.13	chr6	-	3474	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	316	634	-6	-634	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCCTCGGAGGTTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	97125827	97087618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29108.14	chr6	-	2640	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	251	1533	-4	415	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTGTTATTTGCCA	NA	False	NA	-19	True	GATAAA	-22	NA	97125892	97088517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29108.2	chr6	-	4260	17	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	5	5	intron_retention	FALSE	canonical	3	33	junction_8	6.60699203495812	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATCTTCAGGATTTTCT	NA	False	NA	-1	True	AATAAA	-27	NA	97125880	97086979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29108.3	chr6	-	4040	19	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	-49	4	combination_of_known_junctions	FALSE	canonical	3	4	junction_17	11.1428712748068	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCTTCAGGATTTTC	NA	False	NA	-2	True	AATAAA	-26	NA	97125937	97086980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97124970_97125151_97125220_97125792
ES.29108.4	chr6	-	6532	17	NNC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	221	0	intron_retention	FALSE	canonical	0	0	junction_4	15.4267422030706	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACATCTTCAGGAT	NA	False	NA	-6	True	AATAAA	-22	NA	97125600	97086984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095582_97095751_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97124413_97124837
ES.29108.5	chr6	-	7615	6	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	-2022	-2	intron_retention	FALSE	canonical	3	40	junction_3	5.46260011349906	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCTGAACATCTTCAGG	NA	False	NA	-8	True	AATAAA	-20	NA	97097737	97086986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97089168_97089641_97089745_97090803_97095911_97096923_97097011_97097104_97097177_97097672
ES.29108.6	chr6	-	5726	6	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	-2078	-3	intron_retention	FALSE	canonical	3	40	junction_4	5.41848687365763	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTGAACATCTTCAG	NA	False	NA	-9	True	AATAAA	-19	NA	97097793	97086987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97095911_97096923_97097177_97097672
ES.29108.9	chr6	-	4110	18	NNC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	11.6592330906872	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTGAACATCTTCAG	NA	False	NA	-9	True	AATAAA	-19	NA	97125841	97086987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97089159_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ES.29109.1	chr6	+	5865	1	FSM	ENSMUSG00000107502.2	ENSMUST00000203184.2	3527	1	1020	-3358	1020	3358	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	97126174	97132039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_97126200_97132000
ES.2911.1	chr10	+	1691	1	Intergenic	novelGene_2234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTTTCACAGTCTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	61665224	61666915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61665200_61666900
ES.2911.2	chr10	+	2888	1	Intergenic	novelGene_2235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCCCCTGGTGTCC	NA	False	NA	NA	False	TATAAA	-28	NA	61666163	61669051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61666200_61669100
ES.29110.1	chr6	-	6765	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	18	-1051	18	1051	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATTTTACCATAAGTC	7486	False	NA	NA	False	AATAAA	-22	NA	97156065	97128906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.10	chr6	-	5220	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	1	511	1	-511	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCATAAAATTAAGTTTT	7469	False	NA	NA	False	AATAAA	-21	NA	97156082	97130468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.100	chr6	-	3624	2	FSM	ENSMUSG00000030061.17	ENSMUST00000203215.2	1293	2	10	-2341	1	1264	multi-exon	FALSE	canonical	3	461	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTTTAAGTCATATT	NA	False	NA	NA	False	AATAAA	-25	NA	97182519	97178710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97182309_97182493
ES.29110.101	chr6	-	1188	2	FSM	ENSMUSG00000030061.17	ENSMUST00000203215.2	1293	2	13	92	4	-92	multi-exon	FALSE	canonical	3	461	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTTTTCTTGTGTGT	NA	False	NA	NA	False	AATAAA	-27	NA	97182516	97181143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97182309_97182493
ES.29110.12	chr6	-	5258	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-17	-518	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.9578986052415	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTAACAGTCATAAAATT	7451	False	NA	NA	False	AATAAA	-14	NA	97156100	97130475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132486_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.13	chr6	-	4769	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-22	985	-22	-985	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGACTCCATGTGTCC	7446	False	NA	NA	False	AATAAA	-43	NA	97156105	97130942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.14	chr6	-	5236	18	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-17	-1009	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	37.0154741793175	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGGAGCCTGCTGGAAT	7451	False	NA	NA	False	AATAAA	-19	NA	97156100	97130966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97148192_97148318_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.15	chr6	-	5456	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	13	-1009	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.5568453403389	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGGAGCCTGCTGGAAT	7481	False	NA	NA	False	AATAAA	-19	NA	97156070	97130966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97134677_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.16	chr6	-	4488	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-31	1275	-31	994	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTGTAGAATAACTTT	7437	False	NA	NA	False	AATAAA	-19	NA	97156114	97131232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.17	chr6	-	4814	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-10	970	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAAAAAATTGCAA	7458	False	NA	NA	False	NA	NA	NA	97156093	97131256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.18	chr6	-	4291	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-32	1473	-32	796	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCAATTTACTCTTTAA	7436	False	NA	2	True	AATAAA	-26	NA	97156115	97131430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.19	chr6	-	4705	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-75	796	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCAATTTACTCTTTAA	7393	False	NA	2	True	AATAAA	-26	NA	97156158	97131430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.2	chr6	-	6214	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	15	126	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTTCCATTCTTGGGG	7483	False	NA	NA	False	CATAAA	-14	NA	97156068	97129831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.20	chr6	-	3557	15	NIC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	2399	792	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.8817656747713	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAATTTACTCT	9952	False	NA	-2	True	AATAAA	-22	NA	97153599	97131434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97150260_97150365_97152730
ES.29110.21	chr6	-	5032	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-31	792	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.5568453403389	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAATTTACTCT	7437	False	NA	-2	True	AATAAA	-22	NA	97156114	97131434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97134677_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.22	chr6	-	4245	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-16	792	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.8372308887775	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAATTTACTCT	7452	False	NA	-2	True	AATAAA	-22	NA	97156099	97131434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135498_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.23	chr6	-	4294	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-10	791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.9921111830109	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTAGTCAATTTACTC	7458	False	NA	-3	True	AATAAA	-21	NA	97156093	97131435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140667_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.24	chr6	-	5293	32	Fusion	ENSMUSG00000030059.16_ENSMUSG00000030061.17	novel	5732	17	NA	NA	1	787	multi-exon	FALSE	canonical	0	0	junction_8	290.074933804429	566	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTAAAATTAGTCAATTT	NA	False	NA	-7	True	AATAAA	-17	NA	97182519	97131439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140667_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.25	chr6	-	4295	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-20	785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.9578986052415	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCTTAAAATTAGTCAAT	7448	False	NA	-9	True	AATAAA	-15	NA	97156103	97131441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132486_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.27	chr6	-	5896	16	NIC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	7	760	intron_retention	FALSE	canonical	3	74	junction_1	13.5302131049983	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATAAAATCATTAAA	7475	False	NA	-34	True	NA	NA	NA	97156076	97131466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.28	chr6	-	5889	16	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-44	760	intron_retention	FALSE	canonical	0	0	junction_7	26.703308159602	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATAAAATCATTAAA	7424	False	NA	-34	True	NA	NA	NA	97156127	97131466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97137297_97137491_97137562_97138328_97138522_97140479_97140579_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.3	chr6	-	5768	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-31	-5	-31	5	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTGGCAGAAGACTTA	7437	False	NA	NA	False	AATAAA	-18	NA	97156114	97129952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.31	chr6	-	3498	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-31	2265	-31	4	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGCTGTAGATTGTAAA	7437	False	NA	NA	False	AATAAA	-24	NA	97156114	97132222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.32	chr6	-	4224	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.2093266267174	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGGATTTGCTGTAGA	7448	False	NA	NA	False	AATAAA	-17	NA	97156103	97132229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97134677_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140635_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.33	chr6	-	3807	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGGATTTGCTGTAGA	7492	False	NA	NA	False	AATAAA	-17	NA	97156059	97132229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.35	chr6	-	173	1	Intergenic	novelGene_24164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	97133650	97133477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_97133500_97133600
ES.29110.36	chr6	-	2691	11	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-10	8377	-10	-1122	5prime_fragment	FALSE	canonical	3	75	junction_2	14.4986206240456	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCGGTGAGTATATTTAT	7458	False	NA	NA	False	AATAAA	-24	NA	97156093	97138334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.37	chr6	-	3237	10	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-11	9790	-11	-2535	5prime_fragment	FALSE	canonical	3	75	junction_1	15.2712107098033	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTCAGTAGTGTAGTC	7457	False	NA	NA	False	AATAAA	-22	NA	97156094	97139747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.38	chr6	-	3068	10	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-18	-3082	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	30.5799902300366	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTGTCATGTACTT	7450	False	NA	NA	False	NA	NA	NA	97156101	97140294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.39	chr6	-	4286	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	92	-2121	4	1784	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGAAAGGTTTCTGT	NA	False	NA	NA	False	AATAAA	-35	NA	97182516	97158846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.4	chr6	-	6115	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATCCAGTAAGTGGCA	7452	False	NA	NA	False	AATAAA	-9	NA	97156099	97129961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.40	chr6	-	3047	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	89	-879	1	542	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTTTTATTGCATAT	NA	False	NA	NA	False	NA	NA	NA	97182519	97160088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.41	chr6	-	2567	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	65	-375	-14	38	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTGTCTCTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	97182543	97160592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.42	chr6	-	3053	17	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	56	27	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	170.144320633249	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGGGTGGAATCTGTC	NA	False	NA	NA	False	NA	NA	NA	97182464	97160603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875
ES.29110.43	chr6	-	2335	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-18	148	-10	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCAAGTCTC	NA	False	NA	-18	True	AGTAAA	-17	NA	97182539	97160778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ES.29110.45	chr6	-	2368	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	76	-187	-3	-2	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTTATAGTCAAGTC	NA	False	NA	-20	True	AGTAAA	-15	NA	97182532	97160780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.46	chr6	-	3379	17	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	58	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	172.864097179692	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATTTTTATAGTCAAG	NA	False	NA	-22	True	AGTAAA	-13	NA	97182462	97160782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181368
ES.29110.47	chr6	-	2232	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-37	270	-29	67	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTATTATTTCCAGAC	NA	False	NA	60	True	AGTAAA	-39	NA	97182558	97160900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ES.29110.48	chr6	-	2317	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	6	-66	6	66	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTTATTATTTCCAGA	NA	False	NA	59	True	AGTAAA	-38	NA	97182602	97160901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.5	chr6	-	6417	34	Fusion	ENSMUSG00000030059.16_ENSMUSG00000030061.17	novel	5732	17	NA	NA	1	-4	multi-exon	TRUE	canonical	0	0	junction_1	289.584106961331	568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATCCAGTAAGTGGCA	NA	False	NA	NA	False	AATAAA	-9	NA	97182525	97129961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_97131987_97132371_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.50	chr6	-	3247	17	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	56	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	172.864097179692	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTTAAATGTTTACCA	NA	False	NA	44	True	AGTAAA	-23	NA	97182464	97160916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181368
ES.29110.51	chr6	-	2333	19	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	0	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	218.728939021411	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTTTTAAATGTTTA	NA	False	NA	41	True	AGTAAA	-20	NA	97182521	97160919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181368_97181484_97182266_97182309_97182493
ES.29110.52	chr6	-	2440	18	FSM	ENSMUSG00000030061.17	ENSMUST00000204056.2	2561	18	-20	141	-11	48	multi-exon	FALSE	canonical	3	20	junction_16	168.014169776465	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTTTTAAATGTTTA	NA	False	NA	41	True	AGTAAA	-20	NA	97182540	97160919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182063_97182309_97182493
ES.29110.53	chr6	-	6294	16	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	0	48	intron_retention	FALSE	canonical	3	461	junction_15	82.2685575147368	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTTTTAAATGTTTA	NA	False	NA	41	True	AGTAAA	-20	NA	97182526	97160919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97180556_97182266_97182309_97182493
ES.29110.55	chr6	-	4048	12	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	10553	-4	2399	4	3prime_fragment	FALSE	canonical	3	592	junction_11	55.3869931325439	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	7074	False	NA	-3	True	AATAAA	-28	NA	97172055	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701
ES.29110.56	chr6	-	4990	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	4	intron_retention	FALSE	canonical	3	461	junction_16	77.7377150664335	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182525	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.57	chr6	-	2400	19	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	219.024161528662	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182542	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181368_97181574_97182266_97182309_97182493
ES.29110.58	chr6	-	5462	16	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-1	4	intron_retention	FALSE	canonical	3	461	junction_15	79.8925945671228	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182522	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.59	chr6	-	4671	16	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	61	4	intron_retention	FALSE	canonical	0	0	junction_15	177.107675973936	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182459	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97180556_97181368
ES.29110.6	chr6	-	5971	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	-402	163	-402	-163	multi-exon	FALSE	canonical	3	74	junction_1	13.1808336231059	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAACTTACTTATGT	7066	False	NA	NA	False	AATAAA	-26	NA	97156485	97130120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.60	chr6	-	6228	16	NIC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-14	4	intron_retention	FALSE	canonical	3	461	junction_15	80.8214492982319	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182543	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97176283_97178877_97178959_97180434_97182309_97182493
ES.29110.61	chr6	-	2711	17	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	58	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	227.93158752957	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAGTATATCAATAATA	NA	False	NA	-3	True	AATAAA	-28	NA	97182462	97160963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169766_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875
ES.29110.62	chr6	-	8657	14	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_13	87.8128725854927	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182529	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97180556_97182266_97182309_97182493
ES.29110.63	chr6	-	4485	15	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	55	0	intron_retention	FALSE	canonical	3	534	junction_11	64.3583716388164	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182465	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434
ES.29110.64	chr6	-	2135	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	177.124558926762	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182541	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.67	chr6	-	3885	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	461	junction_16	78.5564088728603	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182525	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97182309_97182493
ES.29110.68	chr6	-	2050	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	175.918471439897	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182557	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.69	chr6	-	2712	17	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	170.144320633249	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182487	97160967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875
ES.29110.7	chr6	-	7230	16	NIC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	13	-169	intron_retention	FALSE	canonical	3	74	junction_1	13.5302131049983	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTTTCAACTTAC	7481	False	NA	NA	False	AATAAA	-20	NA	97156070	97130126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.70	chr6	-	2737	16	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	461	junction_15	83.8852125758103	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTTAAAGTATATCAA	NA	False	NA	-8	True	AATAAA	-23	NA	97182527	97160968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.71	chr6	-	2195	18	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_14	169.081233931563	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTTAAAGTATATCAA	NA	False	NA	-8	True	AATAAA	-23	NA	97182567	97160968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178897_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.73	chr6	-	2117	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_14	172.721947342398	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACTTAAAGTATATCA	NA	False	NA	-9	True	AATAAA	-22	NA	97182551	97160969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97180434_97180556_97182266_97182309_97182493
ES.29110.75	chr6	-	3346	18	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	222.206721297128	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACTTAAAGTATATCA	NA	False	NA	-9	True	AATAAA	-22	NA	97182519	97160969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162353_97162436_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97180136_97180434_97180556_97182266_97182309_97182493
ES.29110.76	chr6	-	1850	14	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	189.433381211337	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAACTTAAAGTATATC	NA	False	NA	-10	True	AATAAA	-21	NA	97182531	97160970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97182493
ES.29110.77	chr6	-	3640	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	-4	intron_retention	FALSE	canonical	3	461	junction_16	79.9677425200312	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACTTAAAGTATAT	NA	False	NA	-11	True	AATAAA	-20	NA	97182519	97160971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97180556_97182266_97182309_97182493
ES.29110.79	chr6	-	6435	16	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	7	-5	intron_retention	FALSE	canonical	0	0	junction_4	231.876173851476	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAACTTAAAGTATA	NA	False	NA	-12	True	AATAAA	-19	NA	97182513	97160972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163025_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97180556_97182063_97182309_97182493
ES.29110.8	chr6	-	5547	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-17	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9578986052415	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTTTCAACTTAC	7451	False	NA	NA	False	AATAAA	-20	NA	97156100	97130126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132426_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ES.29110.80	chr6	-	5072	13	NNC	ENSMUSG00000030061.17	novel	2465	17	NA	NA	1751	-5	intron_retention	TRUE	non_canonical	0	0	junction_11	259.523428079667	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAACTTAAAGTATA	6426	False	NA	-12	True	AATAAA	-19	NA	97172703	97160972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97171040_97171087_97171371_97171412
ES.29110.81	chr6	-	2172	18	NNC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	172.52318434039	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAACTTAAAGTATA	NA	False	NA	-12	True	AATAAA	-19	NA	97182525	97160972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162353_97162436_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.82	chr6	-	1961	16	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	181.607146212795	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAACTTAAAGTATA	NA	False	NA	-12	True	AATAAA	-19	NA	97182519	97160972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97182266_97182309_97182493
ES.29110.83	chr6	-	8558	15	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	461	junction_14	84.6390897292975	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGGAAAACTTAAAGTAT	NA	False	NA	-13	True	AATAAA	-18	NA	97182523	97160973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97180556_97182266_97182309_97182493
ES.29110.86	chr6	-	2123	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	75	59	-4	-59	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTGATGCTTTTGC	NA	False	NA	-66	True	AAGAAA	-16	NA	97182533	97161026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.87	chr6	-	1883	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	69	305	-10	-305	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTAGAGTATATCAAAC	NA	False	NA	NA	False	AGTAAA	-14	NA	97182539	97161272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.88	chr6	-	2141	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-8	-436	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	169.693882744283	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTGTGAGTTTGTTG	NA	False	NA	0	True	TTTAAA	-16	NA	97182537	97161403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875_97182309_97182493
ES.29110.89	chr6	-	3445	17	NIC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-29	-441	intron_retention	FALSE	canonical	3	20	junction_15	171.516717479667	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTTGTGTGTGAGTT	NA	False	NA	-5	True	TTTAAA	-11	NA	97182558	97161408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97180556_97182063_97182309_97182493
ES.29110.9	chr6	-	5629	17	NNC	ENSMUSG00000030059.16	novel	5732	17	NA	NA	-31	-505	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	24.0142373135188	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAAGTTTTTGTATT	7437	False	NA	NA	False	AATAAA	-27	NA	97156114	97130462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155471
ES.29110.90	chr6	-	1685	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	5	567	5	-567	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTTCTCTTGAAGACT	NA	False	NA	NA	False	AAAAAG	-22	NA	97182603	97161534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.91	chr6	-	1515	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	0	742	0	-742	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAATAATATACTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	97182608	97161709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.92	chr6	-	1854	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-27	-742	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	169.693882744283	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAATAATATACTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	97182556	97161709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181875_97182309_97182493
ES.29110.93	chr6	-	7328	14	NIC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	-1	-745	intron_retention	FALSE	canonical	3	461	junction_13	73.9135109475373	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATAGAAATAATATACTT	NA	False	NA	NA	False	AATAAA	-19	NA	97182527	97161712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97176283_97178877_97182309_97182493
ES.29110.94	chr6	-	1986	18	NNC	ENSMUSG00000030061.17	novel	2561	18	NA	NA	57	-748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	223.44625388156	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCATAGAAATAATATA	NA	False	NA	NA	False	AATAAA	-16	NA	97182463	97161715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97181178_97181225_97181875
ES.29110.95	chr6	-	1378	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	1	1086	0	-749	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTCATAGAAATAATAT	NA	False	NA	NA	False	AATAAA	-15	NA	97182520	97161716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ES.29110.97	chr6	-	1201	15	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	-2	-1323	combination_of_known_splicesites	FALSE	canonical	3	16	junction_13	226.139608315261	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTATAGTTATAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	97182523	97162290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97180434_97180556_97182493
ES.29110.98	chr6	-	1357	17	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	51	1324	-28	-1324	5prime_fragment	FALSE	canonical	3	461	junction_16	81.2595186731991	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGTATAGTTATAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	97182557	97162291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ES.29110.99	chr6	-	1472	15	ISM	ENSMUSG00000030061.17	ENSMUST00000204056.2	2561	18	-5	1759	1	-1570	5prime_fragment	FALSE	canonical	3	20	junction_13	184.170617435384	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGATGGTGTTCACTA	NA	False	NA	NA	False	AATAAA	-21	NA	97182525	97162537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182063_97182309_97182493
ES.29111.1	chr6	-	144	1	Intergenic	novelGene_24165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-37	NA	97187586	97187442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_97187400_97187600
ES.29112.1	chr6	+	1522	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	-13	-67	-13	67	multi-exon	FALSE	canonical	3	281	junction_2	50	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTTTAGATTTTTTAAA	8435	False	NA	77	True	AATAAA	-26	NA	97187636	97210343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_97187958_97206497_97206716_97209360
ES.29112.2	chr6	+	2500	2	ISM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	92	1495	92	-1495	5prime_fragment	FALSE	canonical	3	381	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGTCCTGGGAAACCGTG	8540	False	NA	NA	False	GATAAA	-35	NA	97187741	97208781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_97187958_97206497
ES.29112.3	chr6	+	2156	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	109	-823	109	823	multi-exon	FALSE	canonical	3	281	junction_2	50	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTGAAGTTTGGC	8557	False	NA	NA	False	AATAAA	-30	NA	97187758	97211099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_97187958_97206497_97206716_97209360
ES.29112.4	chr6	+	3890	1	NIC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	17218	-1519	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-11	NA	97204867	97208757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_97204900_97208800
ES.29113.1	chr6	-	2342	4	NNC	ENSMUSG00000044086.9	novel	2215	3	NA	NA	-409	157	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCCTCCTCTCACTCT	NA	False	NA	NA	False	AATAAA	-32	NA	97230129	97215337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97215833_97224130_97225526_97229238_97229557_97229995
ES.29114.1	chr6	+	175	1	Intergenic	novelGene_24166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97334512	97334687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97334500_97334700
ES.29115.1	chr6	+	172	1	Intergenic	novelGene_24168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATGATAAGAGCT	5929	False	NA	NA	False	NA	NA	NA	97391129	97391301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97391100_97391300
ES.29116.1	chr6	+	1081	1	Intergenic	novelGene_24169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AAAACA	-13	NA	97482332	97483413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97482300_97483400
ES.29117.1	chr6	-	5611	1	FSM	ENSMUSG00000030064.17	ENSMUST00000203486.2	4230	1	-152	-1229	-152	1064	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAACCACTACTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	97268374	97262763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97262800_97268400
ES.29117.10	chr6	-	3818	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5794322355544	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97289389	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277178_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
ES.29117.11	chr6	-	4219	19	NNC	ENSMUSG00000030064.17	novel	4311	23	NA	NA	-448	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	21.6544837543329	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTTTGGATGCTTGT	6966	False	NA	-2	True	AATAAA	-18	NA	97374145	97263828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306548_97330965_97331023_97373153_97373239_97374109
ES.29117.12	chr6	-	3836	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	18.9318954853091	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTTTGGATGCTTGT	NA	False	NA	-2	True	AATAAA	-18	NA	97289389	97263828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283629_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
ES.29117.13	chr6	-	4167	19	NNC	ENSMUSG00000030064.17	novel	4311	23	NA	NA	967	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.7605394920267	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTTTGGATGCTTGT	8413	False	NA	-2	True	AATAAA	-18	NA	97372698	97263828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97372630
ES.29117.15	chr6	-	3841	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	1319	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	16.6839493725756	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTTTGGATGCTT	NA	False	NA	-4	True	AATAAA	-16	NA	97288022	97263830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287903
ES.29117.17	chr6	-	4480	19	NNC	ENSMUSG00000030064.17	novel	4311	23	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	20.71626366522	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTTTGGATGCTT	7424	False	NA	-4	True	AATAAA	-16	NA	97373687	97263830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306540_97330959_97331023_97373153_97373239_97373386
ES.29117.18	chr6	-	4765	24	FSM	ENSMUSG00000030064.17	ENSMUST00000113355.9	4913	24	-66	214	-66	1	multi-exon	FALSE	canonical	0	0	junction_20	23.7882911898179	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGTCATTTGTATCA	NA	False	NA	NA	False	CATAAA	-17	NA	97594568	97264041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97505690_97505813_97594150
ES.29117.19	chr6	-	4403	20	NIC	ENSMUSG00000030064.17	novel	4311	23	NA	NA	-122	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	20.0048470580801	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGTCATTTGTATC	7292	False	NA	NA	False	CATAAA	-16	NA	97373819	97264042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97373386
ES.29117.2	chr6	-	4297	20	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	20.6139828293477	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	7360	False	NA	-1	True	AATAAA	-19	NA	97373751	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97373639
ES.29117.20	chr6	-	3648	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	1319	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	14.4366431924692	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGTCATTTGTATC	NA	False	NA	NA	False	CATAAA	-16	NA	97288022	97264042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287884
ES.29117.21	chr6	-	3631	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	12.9871731591854	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTTTGTCATTTGTAT	NA	False	NA	NA	False	CATAAA	-15	NA	97289409	97264043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
ES.29117.22	chr6	-	3689	13	NNC	ENSMUSG00000030064.17	novel	3996	13	NA	NA	304	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.9377946878833	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTCCTTTGTCATTTG	NA	False	NA	NA	False	CATAAA	-12	NA	97289037	97264046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97288854
ES.29117.24	chr6	-	177	1	Intergenic	novelGene_24167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	9524	False	NA	NA	False	NA	NA	NA	97344655	97344478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_97344500_97344700
ES.29117.3	chr6	-	4964	24	FSM	ENSMUSG00000030064.17	ENSMUST00000113355.9	4913	24	-51	0	-51	0	multi-exon	TRUE	canonical	0	0	junction_20	23.7882911898179	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97594553	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97505690_97505813_97594150
ES.29117.4	chr6	-	3840	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	1342	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	14.4366431924692	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97287999	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97287884
ES.29117.6	chr6	-	4278	20	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-479	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.349527624573	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	6935	False	NA	-1	True	AATAAA	-19	NA	97374176	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279304_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97374080
ES.29117.7	chr6	-	3847	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_12	12.9871731591854	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97289409	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97289287
ES.29117.8	chr6	-	4522	13	NNC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	16.9377946878833	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97289651	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97288854
ES.29117.9	chr6	-	4529	20	NIC	ENSMUSG00000030064.17	novel	4913	24	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	20.0048470580801	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	7381	False	NA	-1	True	AATAAA	-19	NA	97373730	97263827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97373386
ES.29118.1	chr6	+	158	1	Intergenic	novelGene_24170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	97598308	97598466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_97598300_97598500
ES.29119.1	chr6	-	182	1	Intergenic	novelGene_24171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCCACTTAAACC	NA	False	NA	NA	False	NA	NA	NA	97670944	97670762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_97670800_97670900
ES.2912.1	chr10	+	692	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	26.9608770051883	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTTCATTGCTAC	NA	False	NA	15	True	NA	NA	NA	61670282	61710012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61670501_61698165_61698280_61709460_61709561_61709752
ES.2912.2	chr10	+	592	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	20	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTTCATTGCTAC	NA	False	NA	15	True	NA	NA	NA	61670282	61710012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61670501_61698165_61698280_61709752
ES.2912.3	chr10	+	1703	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	26.9608770051883	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTGTCTCTTCACAGC	NA	False	NA	NA	False	NA	NA	NA	61670289	61711030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61670501_61698165_61698280_61709460_61709561_61709752
ES.2912.4	chr10	+	3894	2	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGAGTTTCATTGCT	NA	False	NA	13	True	NA	NA	NA	61705924	61710010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61709561_61709752
ES.29120.1	chr6	-	2014	1	Intergenic	novelGene_24172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	97762298	97760284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_97760300_97762300
ES.29121.1	chr6	+	4940	10	FSM	ENSMUSG00000035158.16	ENSMUST00000043637.14	4881	10	-50	-9	-44	9	multi-exon	FALSE	canonical	3	14	junction_1	22.5738841787048	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTGTGTCCAGTTCA	NA	False	NA	14	True	ATTAAA	-25	NA	97783968	97998319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.10	chr6	+	4497	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	13235	-1	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	24.7979333816348	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	1270	False	NA	4	True	ATTAAA	-15	NA	97931113	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97931211_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.11	chr6	+	4616	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16037	2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	18.3059928711884	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGACCAGTTGTGTC	4072	False	NA	7	True	ATTAAA	-18	NA	97933915	97998312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.12	chr6	+	4733	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16058	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.8014336503177	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACCAGTTGTGTCCAG	4093	False	NA	10	True	ATTAAA	-21	NA	97933936	97998315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97934286_97934422_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.13	chr6	+	4599	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16071	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	19.3612854686872	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	4106	False	NA	6	True	ATTAAA	-17	NA	97933949	97998311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.14	chr6	+	4733	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16071	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	25.298221281347	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	4106	False	NA	5	True	ATTAAA	-16	NA	97933949	97998310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97934286_97934422_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.15	chr6	+	3978	4	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16091	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3964487013015	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	4126	False	NA	6	True	ATTAAA	-17	NA	97933969	97998311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97987355_97987432_97990629_97990778_97994734
ES.29121.16	chr6	+	4843	11	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16097	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	25.3663162481272	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGACCAGTTGTGTC	4132	False	NA	7	True	ATTAAA	-18	NA	97933975	97998312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97934286_97934422_97935689_97935824_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.17	chr6	+	4711	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16100	8	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	24.7026764181985	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGTTGTGTCCAGTTC	4135	False	NA	13	True	ATTAAA	-24	NA	97933978	97998318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97935689_97935824_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.18	chr6	+	4538	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16101	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	22.9779105882149	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACCAGTTGTGTCCAG	4136	False	NA	10	True	ATTAAA	-21	NA	97933979	97998315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97970087_97970316_97971341_97971391_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.19	chr6	+	4656	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16127	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.1651336300303	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	4162	False	NA	4	True	ATTAAA	-15	NA	97934005	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97934286_97934426_97970093_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.20	chr6	+	4614	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16176	5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	24.1844761962894	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACCAGTTGTGTCCAG	4211	False	NA	10	True	ATTAAA	-21	NA	97934054	97998315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97935689_97935824_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.21	chr6	+	2418	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16187	551	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.6163657557973	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTTCTCTGCATTCT	4222	False	NA	NA	False	AAAACA	-27	NA	97934065	97996219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97970087_97970316_97971341_97971471_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.22	chr6	+	6080	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16192	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.7046026457825	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACCAGTTGTGTCCAGT	4227	False	NA	11	True	ATTAAA	-22	NA	97934070	97998316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97934284_97935900_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.23	chr6	+	4619	10	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16240	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.298709282452	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTGTGTTGACCAGTTG	4275	False	NA	3	True	ATTAAA	-14	NA	97934118	97998308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97934147_97935689_97935900_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.24	chr6	+	4515	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	17917	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	24.583721748344	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTTGTGTCCAGTTCAT	5952	False	NA	15	True	ATTAAA	-26	NA	97935795	97998320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97935900_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.25	chr6	+	4543	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	21671	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.2339057618911	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	9706	False	NA	4	True	ATTAAA	-15	NA	97939549	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97939693_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.26	chr6	+	4511	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	21689	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.5751398775266	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGACCAGTTGTGTCC	9724	False	NA	8	True	ATTAAA	-19	NA	97939567	97998313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97939693_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.28	chr6	+	4774	1	NIC	ENSMUSG00000035158.16	novel	4881	10	NA	NA	24654	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	240	False	NA	4	True	ATTAAA	-15	NA	97993535	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_97993500_97998300
ES.29121.3	chr6	+	4880	10	FSM	ENSMUSG00000035158.16	ENSMUST00000203884.3	2113	10	-6	-2761	-6	5	multi-exon	FALSE	canonical	3	14	junction_1	21.9516865686871	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACCAGTTGTGTCCAG	NA	False	NA	10	True	ATTAAA	-21	NA	97784006	97998315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.4	chr6	+	4642	9	NIC	ENSMUSG00000035158.16	novel	4881	10	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.2339057618911	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	NA	False	NA	4	True	ATTAAA	-15	NA	97784006	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_97784249_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.5	chr6	+	4972	11	NNC	ENSMUSG00000035158.16	novel	4881	10	NA	NA	-6	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.6263027850282	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGTGTCCAGTTCATG	NA	False	NA	16	True	ATTAAA	-27	NA	97784006	97998321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97784249_97804419_97804488_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.6	chr6	+	4699	10	NIC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	22.4653368108446	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	NA	False	NA	6	True	ATTAAA	-17	NA	97784015	97998311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_97784249_97918013_97918264_97970087_97970148_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.7	chr6	+	4744	11	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.3480158035796	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTGTGTTGACCAGTT	NA	False	NA	2	True	ATTAAA	-13	NA	97784017	97998307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97784249_97804419_97804488_97805611_97805677_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.8	chr6	+	5020	12	NNC	ENSMUSG00000035158.16	novel	4881	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.6151234167496	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTTGACCAGTTGT	NA	False	NA	4	True	ATTAAA	-15	NA	97784018	97998309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_97784249_97796262_97796335_97804419_97804488_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29121.9	chr6	+	4705	10	NIC	ENSMUSG00000035158.16	novel	4881	10	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	22.8251539824157	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTTGACCAGTTGTGT	NA	False	NA	6	True	ATTAAA	-17	NA	97784027	97998311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_97784249_97918013_97918264_97970087_97970148_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ES.29122.1	chr6	+	257	1	Intergenic	novelGene_24173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	98890505	98890762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_98890500_98890800
ES.29123.1	chr6	+	4413	1	Intergenic	novelGene_24174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAATCAACTATTCCTAT	NA	False	NA	NA	False	NA	NA	NA	98997784	99002197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_98997800_99002200
ES.29124.1	chr6	-	3636	1	ISM	ENSMUSG00000030067.18	ENSMUST00000113326.9	7029	18	336675	867	-55	-790	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAGGTGTAAAGACAAT	NA	False	NA	NA	False	TATAAA	-19	NA	98906801	98903165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_98903200_98906800
ES.29124.10	chr6	-	2242	7	ISM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	-53	34624	1	-12513	5prime_fragment	FALSE	canonical	3	19	junction_4	3.13138237134266	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	99005273	98941674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29124.2	chr6	-	3689	4	ISM	ENSMUSG00000030067.18	ENSMUST00000177230.8	2198	17	221991	-3274	-5482	-1401	3prime_fragment	FALSE	canonical	1	1	junction_3	12.1928941054479	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTGTGCAACTGC	NA	False	NA	NA	False	AATAAA	-27	NA	98917988	98903776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955
ES.29124.3	chr6	-	5252	15	NIC	ENSMUSG00000030067.18	novel	1848	15	NA	NA	41	-1403	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	7.06565420805145	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTTTGTGCAACT	NA	False	NA	NA	False	AATAAA	-25	NA	99005862	98903778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005634
ES.29124.4	chr6	-	2906	15	NIC	ENSMUSG00000030067.18	novel	2198	17	NA	NA	8	66	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	8.55385102435966	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCCAAAGGCTGCACCTT	NA	False	NA	NA	False	NA	NA	NA	99005266	98906083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922385_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29124.6	chr6	-	2880	16	NNC	ENSMUSG00000030067.18	novel	2121	16	NA	NA	-88	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.67691701521277	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTTTTTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	99005362	98906412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918211_98918496_98918619_98921579_98921682_98922307_98922385_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29124.7	chr6	-	2590	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	-112	-630	-58	6	multi-exon	FALSE	canonical	3	13	junction_6	4.40315285926355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGTATTGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99005332	98906420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29124.8	chr6	-	3981	14	NIC	ENSMUSG00000030067.18	novel	1848	15	NA	NA	31	-206	intron_retention	FALSE	canonical	3	13	junction_5	4.17799249661547	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGAGCTCACGTACCT	NA	False	NA	NA	False	NA	NA	NA	99005188	98906632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_98907196_98912234_98912402_98916679_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29124.9	chr6	-	2046	15	NIC	ENSMUSG00000030067.18	novel	2198	17	NA	NA	5	101	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	8.09036968454799	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	False	NA	NA	False	NA	NA	NA	99005269	98906949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99005124
ES.29125.1	chr6	-	193	1	Intergenic	novelGene_24175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGGTATACCAATGCAT	NA	False	NA	NA	False	NA	NA	NA	99014456	99014263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_99014300_99014500
ES.29126.1	chr6	+	163	1	Intergenic	novelGene_24176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAACAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	99032714	99032877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_99032700_99032900
ES.29127.1	chr6	-	162	1	Intergenic	novelGene_24177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAACAAAC	6093	False	NA	NA	False	NA	NA	NA	99188418	99188256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_99188300_99188400
ES.29128.1	chr6	-	210	1	Intergenic	novelGene_24178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACCATTGATCCCATT	NA	False	NA	NA	False	AATAAA	-4	NA	99271068	99270858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_99270900_99271100
ES.29129.1	chr6	+	174	1	Intergenic	novelGene_24179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAAAGAACTAACA	NA	False	NA	NA	False	NA	NA	NA	99283523	99283697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_99283500_99283700
ES.2913.1	chr10	+	802	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	15.3260852434302	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGGTGGCACACACCT	NA	False	NA	NA	False	NA	NA	NA	61751884	61768388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61752029_61767364_61767485_61767595_61767722_61767976
ES.2913.2	chr10	+	1083	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	4.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGGTGGCACACACCT	NA	False	NA	NA	False	NA	NA	NA	61751901	61768388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61752029_61767321_61767485_61767595
ES.2913.3	chr10	+	816	4	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	9.03081145609604	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTGGTGGCACACACC	NA	False	NA	NA	False	NA	NA	NA	61751912	61768387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61752029_61767321_61767485_61767595_61767722_61767976
ES.2913.4	chr10	+	2849	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	11	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTTCCCCAAAGAC	NA	False	NA	NA	False	AATAAA	-34	NA	61751912	61770309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61752029_61767321_61767722_61767976
ES.2913.5	chr10	+	916	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	11	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGTGGCACACACCTT	NA	False	NA	NA	False	NA	NA	NA	61751925	61768389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61752029_61767321_61767722_61767976
ES.2913.6	chr10	+	277	1	Intergenic	novelGene_2237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGCGTACACACGACT	NA	False	NA	NA	False	NA	NA	NA	61761674	61761951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61761700_61762000
ES.2913.7	chr10	+	4894	1	Intergenic	novelGene_2238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCTGTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	61761693	61766587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61761700_61766600
ES.2913.8	chr10	+	3021	1	Intergenic	novelGene_2239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGCACACACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	61765371	61768392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61765400_61768400
ES.29130.1	chr6	+	157	1	Intergenic	novelGene_24180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	99394281	99394438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_99394300_99394400
ES.29131.1	chr6	-	3493	1	Intergenic	novelGene_24181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCTCTGCTAAAACCATT	NA	False	NA	NA	False	NA	NA	NA	99485451	99481958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_99482000_99485500
ES.29132.1	chr6	+	209	1	Intergenic	novelGene_24182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAATTTGAAACT	590	False	NA	NA	False	NA	NA	NA	99522002	99522211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_99522000_99522200
ES.29133.1	chr6	+	2949	1	FSM	ENSMUSG00000072875.3	ENSMUST00000101122.3	2388	1	-560	-1	-560	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTTTGTTTTTGAGG	3207	False	NA	11	True	AATATA	-21	NA	99669079	99672028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_99669100_99672000
ES.29133.2	chr6	+	1817	1	FSM	ENSMUSG00000072875.3	ENSMUST00000101122.3	2388	1	-375	946	-375	-946	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTTCCTAGAGACCAT	3392	False	NA	NA	False	AATAAA	-23	NA	99669264	99671081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_99669300_99671100
ES.29133.3	chr6	+	2377	1	FSM	ENSMUSG00000072875.3	ENSMUST00000101122.3	2388	1	-374	385	-374	-385	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGAAATGGCTTGTGC	3393	False	NA	NA	False	AATAAA	-14	NA	99669265	99671642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_99669300_99671600
ES.29134.1	chr6	-	4451	6	ISM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	12900	0	12900	0	3prime_fragment	FALSE	canonical	2	4	junction_1	1.35646599662505	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	99630832	99602095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679
ES.29134.2	chr6	-	2832	9	NNC	ENSMUSG00000093661.2	novel	2515	7	NA	NA	-26715	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.6809513236909	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	99670447	99602120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99647010_99647150_99670245
ES.29134.3	chr6	-	2668	7	NNC	ENSMUSG00000093661.2	novel	2515	7	NA	NA	-25680	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.42670329642684	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAT	175	False	NA	NA	False	NA	NA	NA	99669412	99602120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99669090
ES.29134.4	chr6	-	2490	7	FSM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	0	25	0	-25	multi-exon	FALSE	canonical	1	1	junction_6	2.11476292340825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	99643732	99602120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99643588
ES.29135.1	chr6	-	10379	6	Fusion	ENSMUSG00000107528.2_ENSMUSG00000107204.2	novel	445	4	NA	NA	-25	14203	multi-exon	TRUE	non_canonical	0	0	junction_1	0.4	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAAATGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	99927917	99847157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_99847489_99850484_99854563_99855400_99859919_99860209_99861499_99927634_99927734_99927853
ES.29135.2	chr6	-	699	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	16	-196	16	196	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATTTCAGAA	NA	False	NA	-10	True	AATAAA	-15	NA	99855279	99854580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_99854600_99855300
ES.29135.3	chr6	-	2528	3	FSM	ENSMUSG00000107528.2	ENSMUST00000204298.2	422	3	-72	-2034	-72	2034	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTTTTCATAGAATTA	NA	False	NA	NA	False	NA	NA	NA	99927964	99903174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_99905493_99927634_99927734_99927853
ES.29135.4	chr6	-	2344	2	Intergenic	novelGene_24183	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	99918061	99915674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_99917896_99917938
ES.29136.1	chr6	+	212	1	Intergenic	novelGene_24184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCCATAGACTCACAGG	NA	False	NA	NA	False	NA	NA	NA	99966378	99966590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_99966400_99966600
ES.29137.1	chr6	+	172	1	Intergenic	novelGene_24185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100109712	100109884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100109700_100109900
ES.29138.1	chr6	-	997	2	Intergenic	novelGene_24186	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAAGCTGTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	100133321	100132162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100133041_100133202
ES.29139.1	chr6	+	184	1	Intergenic	novelGene_24187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAATTGTGTGTAGGT	NA	False	NA	NA	False	NA	NA	NA	100145915	100146099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100145900_100146100
ES.2914.1	chr10	+	160	1	Intergenic	novelGene_2243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	61794934	61795094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61794900_61795100
ES.29140.1	chr6	+	6608	3	Intergenic	novelGene_24188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAAATAGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	100178755	100187643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100178876_100180346_100183520_100184328
ES.29141.1	chr6	+	3688	1	Intergenic	novelGene_24189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	100198049	100201737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100198000_100201700
ES.29142.1	chr6	+	5822	1	Intergenic	novelGene_24191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCAATCTGCTTGATG	NA	False	NA	NA	False	NA	NA	NA	100215314	100221136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100215300_100221100
ES.29142.2	chr6	+	5496	1	Intergenic	novelGene_24190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGCTAGGCATGGTG	NA	False	NA	NA	False	NA	NA	NA	100215314	100220810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100215300_100220800
ES.29143.1	chr6	+	8141	1	Intergenic	novelGene_24196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCGTAATCAACAAGTTG	NA	False	NA	NA	False	NA	NA	NA	100255167	100263308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100255200_100263300
ES.29143.2	chr6	+	1223	1	Intergenic	novelGene_24194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGGAAGGGATGAGA	NA	False	NA	NA	False	AAGAAA	-2	NA	100255167	100256390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100255200_100256400
ES.29143.3	chr6	+	5011	1	Intergenic	novelGene_24195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATCTAAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100255167	100260178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100255200_100260200
ES.29143.4	chr6	+	4518	3	Antisense	novelGene_ENSMUSG00000072872.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGCTTGTCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	100255170	100347336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_100259572_100317689_100317766_100347295
ES.29143.5	chr6	+	180	1	Intergenic	novelGene_24197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	100326529	100326709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100326500_100326700
ES.29144.1	chr6	-	4985	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-477	-5	-477	5	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGATTATTTTTGTTCC	NA	False	NA	NA	False	AATAAA	-19	NA	100264923	100205520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.10	chr6	-	2023	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	29	2451	29	995	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTACTATGGCTCATT	NA	False	NA	NA	False	NA	NA	NA	100264417	100207976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.11	chr6	-	1628	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-6	2881	-6	565	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAAGACTGCTCCAG	NA	False	NA	NA	False	TATAAA	-29	NA	100264452	100208406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.12	chr6	-	1249	5	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	-346	347	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	126.250742572074	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGGCAACGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	100264055	100208624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100263970
ES.29144.14	chr6	-	1463	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-59	3099	-59	347	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGGCAACGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	100264505	100208624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.15	chr6	-	1710	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-503	3296	-503	150	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGGTTTTGTTTCTGT	NA	False	NA	NA	False	TATAAA	-35	NA	100264949	100208821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.16	chr6	-	1671	1	Intergenic	novelGene_24192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATGTTAGAATTTTACA	2531	False	NA	NA	False	NA	NA	NA	100241614	100239943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100239900_100241600
ES.29144.17	chr6	-	5893	1	Intergenic	novelGene_24193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAGAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100258948	100253055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100253100_100258900
ES.29144.2	chr6	-	4614	6	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.264291312419	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGATGATTATTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	100264419	100205524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100209387_100209477_100209615_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29144.5	chr6	-	5314	2	NIC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	-844	0	intron_retention	FALSE	canonical	3	293	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100210936	100205525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_100209927_100210023
ES.29144.6	chr6	-	4499	5	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	126.250742572074	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264206	100205525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100263970
ES.29144.7	chr6	-	4545	6	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	134.947397159041	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264417	100205525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100229879_100229951_100263443_100263570_100264206
ES.29144.8	chr6	-	4459	5	NNC	ENSMUSG00000072872.4	novel	4503	5	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.712181386329	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAGATGATTATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	100264417	100205526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263556_100264206
ES.29144.9	chr6	-	4392	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	-4	115	-4	-115	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGTGCACGACTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	100264450	100205640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ES.29145.1	chr6	+	3999	1	Intergenic	novelGene_24198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTAAAGATTTACATAT	NA	False	NA	NA	False	NA	NA	NA	100355911	100359910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100355900_100359900
ES.29146.1	chr6	-	2370	4	Intergenic	novelGene_24199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4.71404520791032	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCAGTCTCTCTCCCT	NA	False	NA	NA	False	AATAAA	-19	NA	100475558	100454594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100456349_100456872_100457298_100474377_100474514_100475503
ES.29146.2	chr6	-	2897	3	Intergenic	novelGene_24200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCAGTCTCTCTCCCT	NA	False	NA	NA	False	AATAAA	-19	NA	100475561	100454594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100457298_100474377_100474514_100475503
ES.29146.3	chr6	-	2309	3	Intergenic	novelGene_24201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	3.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCAGTCTCTCTCCCT	NA	False	NA	NA	False	AATAAA	-19	NA	100475633	100454594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100456349_100456872_100457298_100475503
ES.29146.4	chr6	-	3014	2	Intergenic	novelGene_24205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	100475848	100454628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100457298_100475503
ES.29146.5	chr6	-	2778	2	Intergenic	novelGene_24204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	100459647	100454628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100457298_100459538
ES.29146.6	chr6	-	2229	3	Intergenic	novelGene_24203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	100459618	100454628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100456349_100456868_100457298_100459538
ES.29146.8	chr6	-	2248	3	Intergenic	novelGene_24202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	100459616	100454628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100456349_100456847_100457298_100459538
ES.29147.1	chr6	+	2672	1	Genic_Genomic	ENSMUSG00000101553.2	novel	NA	NA	NA	NA	3698	343	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTTAGTTTAATTTGG	NA	False	NA	NA	False	NA	NA	NA	100508058	100510730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_100508100_100510700
ES.29148.1	chr6	+	1194	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-35	-721	-35	721	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	100581608	100582802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100581600_100582800
ES.29148.2	chr6	+	1006	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-24	-544	-24	544	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGTTCCCGTTTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	100581619	100582625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100581600_100582600
ES.29148.3	chr6	+	1641	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-19	-1184	-19	1184	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100581624	100583265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100581600_100583300
ES.29149.1	chr6	-	6228	7	ISM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	15784	-4824	15760	-2	3prime_fragment	FALSE	canonical	0	0	junction_2	76.6413001513472	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACCCCTTTATACTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	100632334	100545218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219
ES.29149.10	chr6	-	1253	6	NIC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	1413	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	84.685299786917	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100646681	100550042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_100550750_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660
ES.29149.11	chr6	-	1965	11	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.3295711428861	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648120	100550042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613955_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.12	chr6	-	3206	10	NIC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	67.2078037796868	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648102	100550042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_100550750_100588696_100588818_100607843_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.14	chr6	-	2000	11	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.1074003925041	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648110	100550042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614102_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.15	chr6	-	1878	10	NIC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	86.010909442988	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGGTGTAAATAATTAG	NA	False	NA	-3	True	AATAAA	-17	NA	100648120	100550043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.17	chr6	-	1665	8	FSM	ENSMUSG00000035378.18	ENSMUST00000089245.7	1638	8	-28	1	-10	-1	multi-exon	FALSE	canonical	1	7	junction_2	71.8828411871905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAGGTGTAAATAATTA	NA	False	NA	-4	True	AATAAA	-16	NA	100648128	100550044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100550750_100588696_100588818_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.19	chr6	-	1769	11	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.0933409967757	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAGGTGTAAATAATT	NA	False	NA	-5	True	AATAAA	-15	NA	100648120	100550045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100648099
ES.29149.2	chr6	-	4779	12	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	8	-1379	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.566785494267	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATGGGGCTCCGTGAA	NA	False	NA	NA	False	NA	NA	NA	100648110	100546595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100547914_100548563_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.21	chr6	-	4903	1	Intergenic	novelGene_24206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTATTGATTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	100574165	100569262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100569300_100574200
ES.29149.22	chr6	-	3888	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-2	-26927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGTAAATTTGTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	100648120	100576970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.23	chr6	-	1564	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	-2	-29251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACAGTAAAACTA	NA	False	NA	NA	False	NA	NA	NA	100648120	100579294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.24	chr6	-	1227	8	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	2	-29251	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	92.3869413866241	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACAGTAAAACTA	NA	False	NA	NA	False	NA	NA	NA	100648116	100579294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100579574_100588696_100588818_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.25	chr6	-	1672	1	NIC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	15029	8406	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTGTGGAAGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	100633065	100631393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_100631400_100633100
ES.29149.26	chr6	-	4179	5	Fusion	ENSMUSG00000108122.2_ENSMUSG00000035378.18	novel	750	5	NA	NA	-3	176	intron_retention	FALSE	non_canonical	0	0	junction_1	90.3742219883524	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTCTCGTTCACTAAC	NA	False	NA	NA	False	AATAAA	-16	NA	100648121	100637723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_100638398_100638473_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.27	chr6	-	4243	4	ISM	ENSMUSG00000035378.18	ENSMUST00000089245.7	1638	8	-9	87680	-9	2076	5prime_fragment	FALSE	canonical	3	197	junction_2	8.60232526704263	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGTCTCGTTCACTAAC	NA	False	NA	NA	False	AATAAA	-16	NA	100648109	100637723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.28	chr6	-	4073	5	Fusion	ENSMUSG00000108122.2_ENSMUSG00000035378.18	novel	750	5	NA	NA	-2	172	multi-exon	FALSE	canonical	0	0	junction_1	90.3742219883524	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAAAGTCTCGTTCAC	NA	False	NA	NA	False	AATAAA	-12	NA	100648120	100637727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_100641211_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.3	chr6	-	4404	12	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	-3	-1739	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.566785494267	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGGGTGACTGTGCCGT	NA	False	NA	NA	False	TATAAA	-22	NA	100648097	100546955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100547912_100548563_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.5	chr6	-	2661	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-2	-669	-2	669	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAAGCCTCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	100648120	100549373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.6	chr6	-	1749	6	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	22934	534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.2434413349814	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGCCGAGTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	100625160	100549508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614102_100625124
ES.29149.7	chr6	-	2176	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	21	-207	-3	207	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTATGTCAGCCTGAAA	NA	False	NA	NA	False	NA	NA	NA	100648097	100549835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.8	chr6	-	1877	8	FSM	ENSMUSG00000035378.18	ENSMUST00000089245.7	1638	8	-32	-207	-14	206	multi-exon	FALSE	canonical	1	7	junction_2	71.8828411871905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTATGTCAGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	100648132	100549836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100550750_100588696_100588818_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.29149.9	chr6	-	2010	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	-15	-5	-15	5	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTAAATAATTAGAAATGA	NA	False	NA	3	True	AATAAA	-23	NA	100648133	100550037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ES.2915.1	chr10	+	211	1	Intergenic	novelGene_2244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAGAAAGAAAAGTATT	NA	False	NA	NA	False	NA	NA	NA	61802360	61802571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61802400_61802600
ES.29150.1	chr6	+	1615	7	NNC	ENSMUSG00000030074.10	novel	7658	7	NA	NA	-19	-6050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATATCTCCTGAATCT	NA	False	NA	NA	False	NA	NA	NA	100681675	100781824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100682086_100710141_100710332_100727358_100727491_100760069_100760322_100764171_100764296_100775061_100775235_100781490
ES.29151.1	chr6	+	143	1	Intergenic	novelGene_24207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	100798821	100798964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100798800_100799000
ES.29152.1	chr6	+	161	1	Intergenic	novelGene_24208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	100799367	100799528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_100799400_100799500
ES.29153.1	chr6	+	2994	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	-27	1907	-27	405	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAATACAAAATCTCTT	9633	False	NA	40	True	AATAAA	-34	NA	100810555	100844988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.10	chr6	+	4808	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	17	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	207.510019428618	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAATGTTTTCACGTGT	9677	False	NA	1	True	AATAAA	-35	NA	100810599	100846884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.11	chr6	+	2762	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	17	388	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	210.867885905186	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9677	False	NA	23	True	AATAAA	-17	NA	100810599	100844971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.12	chr6	+	3304	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	17	1553	17	759	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGACATTCATTTGTAAT	9677	False	NA	NA	False	ATTAAA	-17	NA	100810599	100845342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.13	chr6	+	3112	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	24	382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.244670396251	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATATTGGAGTACATT	9684	False	NA	17	True	AATAAA	-11	NA	100810606	100844965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811764_100827760_100827949_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.14	chr6	+	3625	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	24	899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	249.423780386358	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGACCTTTGATAGTC	9684	False	NA	15	True	AATAAA	-15	NA	100810606	100845482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100827760_100827949_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.16	chr6	+	1630	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	25	3219	25	-8	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTGTATGTGGAAGAGC	9685	False	NA	NA	False	AATAAA	-22	NA	100810607	100843676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.18	chr6	+	2774	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	26	382	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATATTGGAGTACATT	9686	False	NA	17	True	AATAAA	-11	NA	100810608	100844965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
ES.29153.19	chr6	+	4383	9	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	26	385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	197.168669861619	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGGAGTACATTTTT	9686	False	NA	20	True	AATAAA	-14	NA	100810608	100844968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840151_100840206_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.2	chr6	+	4901	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	-27	0	-27	0	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTGTGGAATTACTTT	9633	False	NA	12	True	AATAAA	-21	NA	100810555	100846895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.20	chr6	+	3744	9	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	27	1089	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	200.566969800613	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTACCAAAATGACAT	9687	False	NA	10	True	AATAAA	-17	NA	100810609	100845672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838250_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.22	chr6	+	2861	9	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	27	388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	203.15080605304	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9687	False	NA	23	True	AATAAA	-17	NA	100810609	100844971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842810_100843045_100843217
ES.29153.23	chr6	+	3808	7	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	29	385	intron_retention	FALSE	canonical	3	577	junction_1	25.7660413895672	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGGAGTACATTTTT	9689	False	NA	20	True	AATAAA	-14	NA	100810611	100844968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100843045_100843217
ES.29153.25	chr6	+	2765	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	29	388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	191.594350286558	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9689	False	NA	23	True	AATAAA	-17	NA	100810611	100844971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217_100844090_100844245
ES.29153.26	chr6	+	2910	9	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	29	388	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	202.166044070215	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9689	False	NA	23	True	AATAAA	-17	NA	100810611	100844971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842759_100843045_100843217
ES.29153.28	chr6	+	4999	8	ISM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	40	8	40	-8	intron_retention	FALSE	canonical	3	518	junction_7	41.6290714745925	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTTCACGTGTGGA	9700	False	NA	4	True	AATAAA	-38	NA	100810622	100846887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748
ES.29153.29	chr6	+	3134	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	40	756	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGACATTCATTTGT	9700	False	NA	NA	False	ATTAAA	-14	NA	100810622	100845339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
ES.29153.3	chr6	+	3669	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	-10	1215	-10	1097	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAATGACATCACTCAAT	9650	False	NA	18	True	AATAAA	-25	NA	100810572	100845680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.30	chr6	+	4943	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	254.136057659021	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACGTGTGGAATTACT	9708	False	NA	10	True	AATAAA	-44	NA	100810630	100846893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842425_100842545_100842748_100843045_100843217
ES.29153.31	chr6	+	2827	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	48	388	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	208.710325571113	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTACATTTTTATC	9708	False	NA	23	True	AATAAA	-17	NA	100810630	100844971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100842034_100842179_100842748_100843045_100843217
ES.29153.32	chr6	+	1347	3	ISM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	58	16423	58	-12476	5prime_fragment	FALSE	canonical	3	577	junction_1	20	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCATGCTTGGTTGGTGT	9718	False	NA	NA	False	AATAAA	-18	NA	100810640	100830472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_100810879_100811677_100811760_100829445
ES.29153.33	chr6	+	4575	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	151	-4	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCACGTGTGGAATTA	9811	False	NA	8	True	AATAAA	-42	NA	100810733	100846891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
ES.29153.34	chr6	+	3296	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	217	1095	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAAAATGACATCACTCA	9877	False	NA	16	True	AATAAA	-23	NA	100810799	100845678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
ES.29153.35	chr6	+	4815	9	NNC	ENSMUSG00000052144.9	novel	1948	6	NA	NA	422	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.507677323602	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTCACGTGTGGAAT	NA	False	NA	6	True	AATAAA	-40	NA	100811004	100846889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100811248_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.36	chr6	+	5836	3	NNC	ENSMUSG00000052144.9	novel	1948	6	NA	NA	-5664	159	intron_retention	FALSE	non_canonical	0	0	junction_1	304	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATTATAATTTTGAAAA	2138	False	NA	NA	False	ATTAAA	-16	NA	100837422	100843843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100839505_100839916_100843045_100843217
ES.29153.37	chr6	+	4229	2	NIC	ENSMUSG00000052144.9	novel	1948	6	NA	NA	-2521	384	intron_retention	FALSE	canonical	3	608	junction_1	0	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTGGAGTACATTTT	1410	False	NA	19	True	AATAAA	-13	NA	100840565	100844967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100843045_100843217
ES.29153.4	chr6	+	3470	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	0	1404	0	908	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATAGTCTTTATTTAT	9660	False	NA	24	True	AATAAA	-24	NA	100810582	100845491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.5	chr6	+	2694	9	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	0	383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.507677323602	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATATTGGAGTACATTT	9660	False	NA	18	True	AATAAA	-12	NA	100810582	100844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810628_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.6	chr6	+	3806	12	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	13	385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	298.956477110986	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGGAGTACATTTTT	9673	False	NA	20	True	AATAAA	-14	NA	100810595	100844968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100813651_100813707_100815669_100816176_100816234_100816608_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842096_100842179_100842748_100843045_100843217
ES.29153.7	chr6	+	3392	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	14	906	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.594350286558	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGATAGTCTTTATTT	9674	False	NA	22	True	AATAAA	-22	NA	100810596	100845489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810743_100810804_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.8	chr6	+	3496	10	NNC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	16	895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.244670396251	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCTGTGACCTTTGAT	9676	False	NA	11	True	AATAAA	-11	NA	100810598	100845478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_100810879_100811677_100811760_100813651_100813707_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ES.29153.9	chr6	+	3299	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	16	897	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGACCTTTGATAG	9676	False	NA	13	True	AATAAA	-13	NA	100810598	100845480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
ES.29154.1	chr6	-	155	1	Intergenic	novelGene_24209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	100879929	100879774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100879800_100879900
ES.29155.1	chr6	-	1112	1	Intergenic	novelGene_24210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTCTATG	NA	False	NA	NA	False	NA	NA	NA	100953855	100952743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_100952700_100953900
ES.29156.1	chr6	+	2622	3	NNC	ENSMUSG00000107427.2	novel	2376	4	NA	NA	-25322	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTACCAGC	NA	False	NA	NA	False	NA	NA	NA	101010809	101174974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_101010964_101127616_101128019_101172908
ES.29157.1	chr6	+	743	1	Intergenic	novelGene_24211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCAGCATTCC	NA	False	NA	NA	False	NA	NA	NA	101180133	101180876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_101180100_101180900
ES.29158.1	chr6	+	5920	1	Intergenic	novelGene_24212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCGCCCTCCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	101268291	101274211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_101268300_101274200
ES.29159.1	chr6	-	1673	1	FSM	ENSMUSG00000107806.2	ENSMUST00000205008.2	240	1	-1325	-108	-1325	108	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GACAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	101124765	101123092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_101123100_101124800
ES.2916.1	chr10	+	890	2	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCACTTTGGTGGTATC	NA	False	NA	NA	False	NA	NA	NA	61814131	61817955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_61814627_61817560
ES.29160.1	chr6	-	4213	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-114	5	-114	-5	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101354972	101126574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
ES.29160.2	chr6	-	3340	8	NNC	ENSMUSG00000035357.18	novel	1808	8	NA	NA	61927	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.39095723176481	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101270044	101126574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101269876
ES.29160.3	chr6	-	3545	8	FSM	ENSMUSG00000035357.18	ENSMUST00000239140.2	1808	8	-10	-1727	4	-5	multi-exon	FALSE	canonical	0	0	junction_7	8.39095723176481	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCTGACATGGGTGTT	NA	False	NA	-9	True	AATAAA	-19	NA	101176157	101126574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101175784
ES.29160.4	chr6	-	4120	9	NIC	ENSMUSG00000035357.18	novel	4104	10	NA	NA	-109	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	7.88095013307406	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTCTGACATGGGTGT	NA	False	NA	-10	True	AATAAA	-18	NA	101354967	101126575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101354126
ES.29160.5	chr6	-	3497	8	NIC	ENSMUSG00000035357.18	novel	4104	10	NA	NA	265	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.98978940234832	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTCTGACATGGGTGT	NA	False	NA	-10	True	AATAAA	-18	NA	101354593	101126575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101331354_101331463_101339099_101339187_101354126
ES.29160.6	chr6	-	2647	8	NNC	ENSMUSG00000035357.18	novel	1808	8	NA	NA	61993	-632	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.39095723176481	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGATCTTTTATTAAGC	NA	False	NA	NA	False	CATAAA	-14	NA	101269978	101127201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101269876
ES.29160.7	chr6	-	5513	5	ISM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	-37	15312	-37	4935	5prime_fragment	FALSE	canonical	3	11	junction_1	2.95803989154981	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAGAGACAATAATCCACA	NA	False	NA	NA	False	NA	NA	NA	101354895	101141881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
ES.29161.1	chr6	-	193	1	Intergenic	novelGene_24213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101536001	101535808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_101535800_101536000
ES.29162.1	chr6	-	5293	22	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8689	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1.9633836312465	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTACATTGTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	102541373	102140264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_102142380_102145853_102146023_102147538_102147652_102164000_102164188_102176196_102176313_102180792_102181028_102183487_102183559_102185274_102185434_102186199_102186318_102218950_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
ES.29162.2	chr6	-	5481	23	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8651	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.93061459832685	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTACATTGTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	102541411	102140264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_102142380_102145853_102146023_102147538_102147652_102164000_102164188_102176196_102176313_102180792_102181028_102183487_102183559_102185019_102185170_102185274_102185434_102186199_102186318_102218950_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
ES.29162.3	chr6	-	3731	24	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8722	-1837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.96279188526882	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTAATATTTGCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	102541340	102142103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_102142380_102144522_102144683_102145853_102146023_102147538_102147652_102164000_102164188_102176196_102176313_102180792_102181028_102183487_102183559_102185019_102185170_102185274_102185434_102186199_102186318_102218950_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
ES.29162.4	chr6	-	3599	23	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8684	-1847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.93061459832685	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATCTGAGATGCCTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	102541378	102142113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_102142380_102145853_102146023_102147538_102147652_102164000_102164188_102176196_102176313_102180792_102181028_102183487_102183559_102185019_102185170_102185274_102185434_102186199_102186318_102218950_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
ES.29162.5	chr6	-	2819	13	NNC	ENSMUSG00000030075.11	novel	5294	23	NA	NA	8677	-77887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.25308430576596	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGCAAGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	102541385	102218153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_102219127_102222005_102222134_102242279_102242431_102244334_102244465_102246064_102246202_102250600_102250786_102254179_102254283_102255238_102255443_102314258_102314355_102397213_102397390_102414763_102414891_102441489_102441625_102541111
ES.29163.1	chr6	-	180	1	Intergenic	novelGene_24214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAGCTGATTA	NA	False	NA	NA	False	NA	NA	NA	102682471	102682291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_102682300_102682500
ES.29164.1	chr6	-	230	1	Intergenic	novelGene_24215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGACAGAAGAGAAGTA	NA	False	NA	88	True	AATAAA	-42	NA	102913341	102913111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_102913100_102913300
ES.29165.1	chr6	+	4651	27	NIC	ENSMUSG00000030077.12	novel	7562	27	NA	NA	69	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.963843391241666	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTAAAGTTATTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	103487615	103706789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_103488111_103537006_103537077_103618854_103619023_103624184_103624291_103626450_103626639_103641638_103641762_103642771_103642943_103643880_103643929_103645688_103645810_103651933_103652119_103660108_103660241_103667176_103667318_103668526_103668639_103669981_103670149_103672297_103672464_103675065_103675191_103676100_103676203_103677365_103677564_103678766_103678838_103683374_103683598_103685382_103685499_103685668_103685874_103686083_103686207_103688027_103688208_103692228_103692361_103694519_103694593_103706079
ES.29166.1	chr6	+	175	1	Intergenic	novelGene_24216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGGCTTCTTAGATT	NA	False	NA	NA	False	NA	NA	NA	103721305	103721480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_103721300_103721500
ES.29167.1	chr6	-	178	1	Intergenic	novelGene_24217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	103758922	103758744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_103758700_103758900
ES.29168.1	chr6	+	176	1	Intergenic	novelGene_24218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTGGAAGAATA	NA	False	NA	NA	False	NA	NA	NA	105093783	105093959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_105093800_105094000
ES.29169.1	chr6	-	220	1	Intergenic	novelGene_24219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	105126902	105126682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_105126700_105126900
ES.2917.1	chr10	-	4394	26	NNC	ENSMUSG00000058806.16	novel	3037	40	NA	NA	-12974	2	intron_retention	TRUE	canonical	0	0	junction_16	6.78822509939086	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGTTAATCTCTAAAT	NA	False	NA	-1	True	AATAAA	-16	NA	61727145	61674012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61703988_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857
ES.2917.10	chr10	-	3620	1	Intergenic	novelGene_2236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATGGAGGATCAGCCT	NA	False	NA	NA	False	NA	NA	NA	61683743	61680123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61680100_61683700
ES.2917.11	chr10	-	4154	22	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-10	-16770	intron_retention	FALSE	canonical	0	0	junction_20	6.01170438138478	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGCATGAGGCCACAC	NA	False	NA	NA	False	ATTAAA	-19	NA	61814897	61701409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61702194_61703230_61703300_61703609_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61726986_61727044_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
ES.2917.12	chr10	-	3706	1	Intergenic	novelGene_2240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAAGGGTGGGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	61769212	61765506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61765500_61769200
ES.2917.13	chr10	-	2723	2	Intergenic	novelGene_2241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCAAAGGGTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	61768344	61765510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61767485_61767595
ES.2917.14	chr10	-	2578	2	Intergenic	novelGene_2242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCAAAGGGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	61768344	61765511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61767720_61767974
ES.2917.2	chr10	-	2991	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGGTTAATCTCTAAA	NA	False	NA	-2	True	AATAAA	-15	NA	61814909	61674013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
ES.2917.3	chr10	-	2352	38	NNC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	63	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	6.88664347056846	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCCTGGTTAATCTCTA	NA	False	NA	-4	True	AATAAA	-13	NA	61813837	61674015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729689_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61744460_61744497_61747485_61747513_61797067_61797138_61813768
ES.2917.4	chr10	-	2661	1	NIC	ENSMUSG00000058806.16	novel	713	5	NA	NA	8211	-104	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGGTCGGTGGTGTTTG	3506	False	NA	-107	True	NA	NA	NA	61676779	61674118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674100_61676800
ES.2917.5	chr10	-	2206	38	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-375	-252	combination_of_known_splicesites	FALSE	canonical	0	0	junction_36	6.49065181575979	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTGCTCCTAATGTTG	NA	False	NA	NA	False	TATAAA	-27	NA	61814275	61674266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61744460_61744497_61747485_61747513_61797067_61797138_61814127
ES.2917.6	chr10	-	5971	5	NIC	ENSMUSG00000058806.16	novel	1204	14	NA	NA	389	-264	intron_retention	FALSE	canonical	3	15	junction_2	3.56195171219375	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGTCTGTGCGTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	61686915	61674278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674488_61675856_61675896_61679346_61684991_61685935_61685990_61686890
ES.2917.7	chr10	-	2760	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-56	-264	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	5.3822080288025	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGTCTGTGCGTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	61814943	61674278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797067_61797138_61814127
ES.2917.8	chr10	-	2201	36	NNC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-417	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	6.16812080667315	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGTCTGTGCGTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	61814317	61674278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61729677_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61738868_61738920_61747485_61747513_61797055_61797138_61814127
ES.2917.9	chr10	-	2711	36	NIC	ENSMUSG00000058806.16	novel	3162	41	NA	NA	-22	-264	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	6.28986875694492	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTGTCTGTGCGTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	61814909	61674278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61697793_61697893_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61728734_61728762_61729693_61729721_61729812_61729840_61731112_61731140_61732124_61732152_61732917_61732954_61747485_61747513_61797067_61797138_61814127
ES.29170.1	chr6	-	207	1	Intergenic	novelGene_24220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAACAAAACAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	106517664	106517457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_106517500_106517700
ES.29171.1	chr6	+	2291	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-74	-819	-28	-1	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCGTTATTTCTG	NA	False	NA	11	True	AATAAA	-20	NA	106746052	106759434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.10	chr6	+	2274	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	8	1	4	-1	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCGTTATTTCTG	NA	False	NA	11	True	AATAAA	-20	NA	106746134	106759434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.11	chr6	+	4449	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	11	2	7	-2	intron_retention	FALSE	canonical	3	574	junction_1	134.183243578112	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746137	106759433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.12	chr6	+	2363	10	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	20	-10	intron_retention	FALSE	canonical	3	16	junction_3	364.812585065568	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746150	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746790_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.13	chr6	+	2337	10	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	20	-10	intron_retention	FALSE	canonical	3	16	junction_3	417.503367325816	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746150	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746816_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.14	chr6	+	5537	8	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	20	-3	intron_retention	FALSE	canonical	3	574	junction_1	140.23231453847	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	106746150	106759432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746790_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.15	chr6	+	4579	7	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	24	3	20	-3	intron_retention	FALSE	canonical	3	574	junction_1	138.748473465076	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	106746150	106759432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748
ES.29171.16	chr6	+	1579	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	25	2858	21	1935	5prime_fragment	FALSE	canonical	3	574	junction_1	134.183243578112	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTATGTTTTCTTAGTG	NA	False	NA	NA	False	NA	NA	NA	106746151	106756577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.18	chr6	+	3160	9	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	21	-10	intron_retention	FALSE	canonical	3	16	junction_2	306.447691294942	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746151	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746790_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.19	chr6	+	5992	8	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	21	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	325.32351245353	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTCTTTGTCGTTA	NA	False	NA	5	True	AATAAA	-14	NA	106746151	106759428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746660_106746772_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.2	chr6	+	4426	8	ISM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-29	-820	-4	0	intron_retention	FALSE	canonical	3	228	junction_1	247.454963950359	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746097	106759435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.21	chr6	+	1619	10	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	294.0086082556	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746151	106759433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607_106758711_106759347
ES.29171.22	chr6	+	4126	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	27	-1870	-20	1870	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCCTATTTTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	106746153	106761305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.23	chr6	+	2237	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	69	junction_5	290.240606006465	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCGTTATTTCTG	NA	False	NA	11	True	AATAAA	-20	NA	106746162	106759434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753198_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.24	chr6	+	4738	6	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	574	junction_1	147.406105708007	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTCGTTATTTCTG	NA	False	NA	11	True	AATAAA	-20	NA	106746162	106759434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106756429_106758607
ES.29171.25	chr6	+	2275	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	7	junction_1	302.286701659203	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	106746166	106759432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746253_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.26	chr6	+	2700	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	304.514752310951	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746167	106759433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746660_106746772_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.27	chr6	+	5783	8	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	-3	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	420.192715747604	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTCTTTGTCGTTA	NA	False	NA	5	True	AATAAA	-14	NA	106746170	106759428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746660_106746772_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.28	chr6	+	6960	5	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	46	-52	-1	52	intron_retention	FALSE	canonical	3	574	junction_1	159.926545638928	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAAAGGTTAAATGGAG	NA	False	NA	64	True	NA	NA	NA	106746172	106759487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079
ES.29171.29	chr6	+	4861	8	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	11	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	325.184782634647	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	106746184	106759432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746660_106746772_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.3	chr6	+	4565	7	ISM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	-26	-818	-1	-2	intron_retention	FALSE	canonical	3	228	junction_1	259.583480470798	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTGTCGTTATTTCT	NA	False	NA	10	True	AATAAA	-19	NA	106746100	106759433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748
ES.29171.30	chr6	+	2777	8	ISM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	97	-596	25	-7	3prime_fragment	FALSE	canonical	3	738	junction_7	88.0727899327063	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTCTTTGTCGTTA	NA	False	NA	5	True	AATAAA	-14	NA	106746198	106759428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.31	chr6	+	4686	7	NNC	ENSMUSG00000013736.17	novel	476	4	NA	NA	29	-10	intron_retention	FALSE	non_canonical	0	0	junction_1	342.458148294552	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746496	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_106746660_106746772_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748
ES.29171.32	chr6	+	2381	1	Genic_Genomic	ENSMUSG00000013736.17	novel	NA	NA	NA	NA	1368	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGACCAAACAAATCCTTC	NA	False	NA	-37	True	AAAACA	-8	NA	106747835	106750216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_106747800_106750200
ES.29171.33	chr6	+	5161	5	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	3288	11	2947	-11	intron_retention	FALSE	canonical	3	823	junction_3	59.6866819315666	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATTTCATTCTTTGTC	NA	False	NA	1	True	AATAAA	-10	NA	106749414	106759424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748
ES.29171.34	chr6	+	4468	6	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	3837	11	3496	-11	intron_retention	FALSE	canonical	3	823	junction_3	54.8984517085865	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATTTCATTCTTTGTC	NA	False	NA	1	True	AATAAA	-10	NA	106749963	106759424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29171.4	chr6	+	2208	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	-1	-593	-1	-10	multi-exon	FALSE	canonical	1	13	junction_1	300.377991037959	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746100	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_106746153_106746816_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.6	chr6	+	2330	10	NIC	ENSMUSG00000013736.17	novel	1398	9	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	16	junction_3	390.247816169023	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	False	NA	2	True	AATAAA	-11	NA	106746118	106759425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746153_106746790_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ES.29171.7	chr6	+	993	7	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	-6	3619	-6	1174	5prime_fragment	FALSE	canonical	3	574	junction_1	138.748473465076	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATGACTCTTTTGGC	NA	False	NA	NA	False	AGTAAA	-22	NA	106746120	106755816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748
ES.29171.8	chr6	+	10483	4	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	574	junction_1	181.3327205872	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTTGTCGTTATTTC	NA	False	NA	9	True	AATAAA	-18	NA	106746126	106759432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_106746218_106746790_106751506_106753079_106755073_106755748
ES.29171.9	chr6	+	2373	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	3	2086	-1	-1266	5prime_fragment	FALSE	canonical	3	574	junction_1	134.183243578112	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTAAAGGGATCTA	NA	False	NA	NA	False	AATAAA	-18	NA	106746129	106757349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ES.29172.1	chr6	-	4025	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4	-1957	0	1957	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATCTCAGAATTTCATT	NA	False	NA	-1	True	AATAAA	-28	NA	106777022	106755204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
ES.29172.10	chr6	-	9211	4	NIC	ENSMUSG00000005362.15	novel	2072	11	NA	NA	9039	1335	intron_retention	FALSE	canonical	3	188	junction_3	26.2805377925694	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGTTTTGGTGAAAAG	4688	False	NA	NA	False	AATAAA	-14	NA	106766955	106755826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758796_106759423_106759489_106759871_106760471_106761377
ES.29172.11	chr6	-	3281	10	NIC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	4	1333	intron_retention	FALSE	canonical	2	10	junction_1	66.8909191275497	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTGGTTTTGGTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	106777031	106755828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758072_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.13	chr6	-	2568	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-6	-478	-3	478	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCTCCTGTTATTCC	NA	False	NA	NA	False	TATAAA	-16	NA	106777041	106756683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.14	chr6	-	8436	10	NIC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	188	junction_5	23.1362043260619	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGCTCCTTAATGTCA	NA	False	NA	-35	True	AATAAA	-15	NA	106777037	106757163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.15	chr6	-	6617	3	NIC	ENSMUSG00000005362.15	novel	2072	11	NA	NA	11203	-2	intron_retention	FALSE	canonical	3	214	junction_2	19	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGCTCCTTAATGTCA	6852	False	NA	-35	True	AATAAA	-15	NA	106764791	106757163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758796_106759423_106759489_106759871
ES.29172.16	chr6	-	2086	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-5	3	-2	-3	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCTGCTCCTTAATGTC	NA	False	NA	-36	True	AATAAA	-14	NA	106777040	106757164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.17	chr6	-	2003	11	NNC	ENSMUSG00000005362.15	novel	2072	11	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	81.8919409954362	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAGGCTGCTCCTTAAT	NA	False	NA	-39	True	AATAAA	-11	NA	106777032	106757167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767861_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
ES.29172.18	chr6	-	2309	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.8991291672108	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGGCTGCTCCTTAA	NA	False	NA	-40	True	AATAAA	-10	NA	106777038	106757168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_106758301_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.19	chr6	-	1936	10	NIC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	66.8909191275497	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGGCTGCTCCTTAA	NA	False	NA	-40	True	AATAAA	-10	NA	106777026	106757168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758072_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.2	chr6	-	4715	2	NIC	ENSMUSG00000005362.15	novel	2072	11	NA	NA	15447	1957	intron_retention	FALSE	canonical	3	252	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATCTCAGAATTTCATT	NA	False	NA	-1	True	AATAAA	-28	NA	106760547	106755204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_106758796_106759423
ES.29172.21	chr6	-	1804	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	24	256	11	-256	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTTGGTGTAGTTGCA	NA	False	NA	NA	False	ATTAAA	-30	NA	106777011	106757417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.23	chr6	-	5967	5	FSM	ENSMUSG00000005362.15	ENSMUST00000147087.2	2784	5	-27	-3156	-11	-2122	multi-exon	FALSE	canonical	3	193	junction_4	25.0099980007996	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTTGATTATGAAATCT	NA	False	NA	NA	False	AATAAA	-17	NA	106777049	106762552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.24	chr6	-	2904	1	FSM	ENSMUSG00000005362.15	ENSMUST00000204230.2	2898	1	16	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCTCCTTTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	106777022	106774118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106774100_106777000
ES.29172.5	chr6	-	3970	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	-2	1950	intron_retention	FALSE	canonical	2	4	junction_6	68.1953810752605	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAAGTTTATCTCAGAA	NA	False	NA	-8	True	AATAAA	-21	NA	106777040	106755211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767861_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.6	chr6	-	4111	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	3	1946	intron_retention	FALSE	non_canonical	0	0	junction_9	67.1547466676779	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCCCAAAGTTTATCTC	NA	False	NA	-12	True	AATAAA	-17	NA	106777019	106755215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772745_106772959_106776951
ES.29172.7	chr6	-	3446	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	-1	-1361	-1	1361	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTACTGACTTTGTT	NA	False	NA	NA	False	AATAAA	-40	NA	106777036	106755800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29172.8	chr6	-	3338	11	NNC	ENSMUSG00000005362.15	novel	2084	11	NA	NA	2	1338	intron_retention	FALSE	canonical	2	4	junction_6	68.1953810752605	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTGGTGAAAAGCCT	NA	False	NA	NA	False	AATAAA	-17	NA	106777020	106755823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767861_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ES.29173.1	chr6	-	1288	1	Intergenic	novelGene_24221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAAACCTTTTC	NA	False	NA	NA	False	TTTAAA	-38	NA	107048720	107047432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_107047400_107048700
ES.29174.1	chr6	-	177	1	Intergenic	novelGene_24222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	107478960	107478783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_107478800_107479000
ES.29175.1	chr6	+	175	1	Intergenic	novelGene_24223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	107500764	107500939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_107500800_107500900
ES.29176.1	chr6	+	3742	2	FSM	ENSMUSG00000034648.10	ENSMUST00000049285.10	3700	2	-33	-9	-33	9	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATCATTTATTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	107506695	107547184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_107507205_107543951
ES.29177.1	chr6	+	129	1	Intergenic	novelGene_24224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	107907283	107907412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_107907300_107907400
ES.29178.1	chr6	+	1622	2	FSM	ENSMUSG00000034639.8	ENSMUST00000049246.7	1612	2	-6	-4	-6	4	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCGATCTTATTACTTG	NA	False	NA	10	True	AATAAA	-20	NA	108041999	108054087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108042201_108052666
ES.29179.1	chr6	+	176	1	Intergenic	novelGene_24225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108117525	108117701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_108117500_108117700
ES.2918.1	chr10	+	177	1	Intergenic	novelGene_2245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGTACACCTC	NA	False	NA	NA	False	NA	NA	NA	61883461	61883638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_61883500_61883600
ES.29180.1	chr6	-	5217	8	NIC	ENSMUSG00000030101.16	novel	2593	9	NA	NA	-8	919	intron_retention	FALSE	canonical	3	77	junction_4	16.1510724986653	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTATTTATGTAGGAAATA	2490	False	NA	NA	False	NA	NA	NA	108162525	108083069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.10	chr6	-	1772	8	NNC	ENSMUSG00000030101.16	novel	452	2	NA	NA	7	1930	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	32.630898090676	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGGTTTGGTCTTTG	2479	False	NA	NA	False	AATAAA	-25	NA	108162536	108119343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108120149_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.11	chr6	-	179	1	Intergenic	novelGene_24226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	108148449	108148270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_108148300_108148400
ES.29180.2	chr6	-	3463	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	3	-873	3	873	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTATGTGATGATTAATC	2475	False	NA	NA	False	TATAAA	-16	NA	108162540	108083115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.3	chr6	-	2597	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	0	-4	0	4	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCACTTTTTCATTCTT	2472	False	NA	NA	False	AATAAA	-19	NA	108162543	108083984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.4	chr6	-	3155	5	ISM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	31161	2	-2135	-2	3prime_fragment	FALSE	canonical	3	77	junction_4	13.2098448136229	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGACTTCACTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	108131382	108083990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073
ES.29180.5	chr6	-	4085	8	NNC	ENSMUSG00000030101.16	novel	2593	9	NA	NA	-6	-204	intron_retention	FALSE	canonical	2	2	junction_5	37.6861366812676	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTCTGAGTCTCATTTAT	2492	False	NA	-14	True	NA	NA	NA	108162523	108084192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108131996_108150316_108150392_108152948_108153123_108162253
ES.29180.6	chr6	-	2376	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	9	208	9	-208	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAGTCTGAGTCTCAT	2481	False	NA	-18	True	NA	NA	NA	108162534	108084196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.8	chr6	-	2123	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	17	453	-9	-453	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGAGGGATTAGAG	2489	False	NA	NA	False	NA	NA	NA	108162526	108084441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ES.29180.9	chr6	-	373	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	4	13	4	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTTATTT	NA	False	NA	-20	True	AATAAA	-14	NA	108117466	108117093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108117100_108117500
ES.29181.1	chr6	+	9760	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-1	9	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_26	14.5585047121273	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGTGGCTTTCATTT	NA	False	NA	13	True	AATAAA	-24	NA	108190055	108528079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.10	chr6	+	4975	31	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	717	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_25	16.9266719180772	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTATGGTAGTCTGCAC	NA	False	NA	NA	False	NA	NA	NA	108190057	108379146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273
ES.29181.11	chr6	+	9804	59	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	17.385304453456	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGACTGGCTGGTGGC	NA	False	NA	5	True	AATAAA	-16	NA	108190057	108528071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494607_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.12	chr6	+	6147	40	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	1	127052	1	5056	5prime_fragment	FALSE	non_canonical	0	0	junction_26	16.9490864617217	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGTTTTCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	108190057	108401018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108400293
ES.29181.13	chr6	+	5778	38	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	1	133683	1	-1575	5prime_fragment	FALSE	non_canonical	0	0	junction_26	14.5658876833141	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTGAGTTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	108190057	108394387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770
ES.29181.14	chr6	+	9780	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.3465709974349	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTGGCTGGTGGCTTT	NA	False	NA	8	True	AATAAA	-19	NA	108190057	108528074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.15	chr6	+	7752	53	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	3105	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	14.4838591044035	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTCTCTAACACCAGAA	NA	False	NA	NA	False	AGTAAA	-21	NA	108190057	108492996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718
ES.29181.16	chr6	+	5804	38	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	-1576	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.5844034337906	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTGAGTTGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	108190057	108394386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770
ES.29181.17	chr6	+	8973	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	-803	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.3465709974349	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAATGCTGCTGCTGCTG	NA	False	NA	NA	False	AATAAA	-10	NA	108190057	108527267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.18	chr6	+	5510	39	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	-940	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.4588408935746	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGCCCCTTAGTTAC	NA	False	NA	NA	False	ATTAAA	-18	NA	108190057	108395022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849
ES.29181.19	chr6	+	9732	58	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_25	17.4254954494549	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGACTGGCTGGTGGC	NA	False	NA	5	True	AATAAA	-16	NA	108190057	108528071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.2	chr6	+	9407	56	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	0	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_25	19.5888313599762	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190056	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.22	chr6	+	5474	32	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	1	148470	1	1171	5prime_fragment	FALSE	non_canonical	0	0	junction_26	13.8293449026714	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTTGATTTTCTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	108190057	108379600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273
ES.29181.23	chr6	+	5545	40	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	1	127654	1	4454	5prime_fragment	FALSE	non_canonical	0	0	junction_26	16.9490864617217	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCGTCTAGCGTCTGA	NA	False	NA	NA	False	NA	NA	NA	108190057	108400416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108400293
ES.29181.24	chr6	+	9594	58	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	2	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_26	17.4931899865757	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190058	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.25	chr6	+	9456	57	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	2	5	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_26	17.7334196058845	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGGCTGGTGGCTTTC	NA	False	NA	9	True	AATAAA	-20	NA	108190058	108528075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.26	chr6	+	9798	60	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	18.5602894260685	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190060	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366518_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108409606_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.27	chr6	+	9829	61	NIC	ENSMUSG00000030102.12	novel	9761	62	NA	NA	4	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	18.9862230753425	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190060	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108408421_108408458_108409609_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.28	chr6	+	5493	32	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	4	1164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	18.1178934900316	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATTATGCCTTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	108190060	108379593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366518_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273
ES.29181.3	chr6	+	7853	40	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	0	125347	0	6761	5prime_fragment	FALSE	non_canonical	0	0	junction_26	16.9490864617217	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGAGGGTGTCGGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	108190056	108402723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108400293
ES.29181.30	chr6	+	9810	60	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	19.0134744098838	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190060	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393137_108393176_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.32	chr6	+	10728	57	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_24	16.5954163668091	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190060	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.33	chr6	+	9633	58	NNC	ENSMUSG00000030102.12	novel	9761	62	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.7577545617414	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190064	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358147_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108409609_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459854_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.35	chr6	+	8267	56	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-52	2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.4227909062803	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGCCTTTCGGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	108190110	108496635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245
ES.29181.36	chr6	+	9776	60	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-48	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	19.1343096055041	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTGGCTGGTGGCTTT	NA	False	NA	8	True	AATAAA	-19	NA	108190114	108528074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366518_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108409606_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.37	chr6	+	6426	31	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-43	1157	intron_retention	FALSE	non_canonical	0	0	junction_25	13.7276687346719	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGGAAACAAATTATGC	NA	False	NA	NA	False	AATAAA	-17	NA	108190119	108379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273
ES.29181.38	chr6	+	7349	51	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-17	59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	19.0348732593627	167	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAAGCCTGAGAATCCA	NA	False	NA	NA	False	AATAAA	-30	NA	108190145	108476654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465449_108465570_108466775_108466881_108470661_108470855_108476068_108476429_108476584
ES.29181.39	chr6	+	11298	57	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	54	-1	intron_retention	FALSE	non_canonical	0	0	junction_22	16.7516276242407	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108190216	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108366518_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.4	chr6	+	8950	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	0	-800	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	14.5585047121273	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGCTGCTGCTGCCA	NA	False	NA	NA	False	AATAAA	-13	NA	108190056	108527270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.40	chr6	+	9829	58	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	664	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_25	14.6853947414923	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190826	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.41	chr6	+	9490	58	NNC	ENSMUSG00000030102.12	novel	1462	11	NA	NA	16109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7389677175654	186	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108206271	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108206319_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.42	chr6	+	10861	1	Intergenic	novelGene_24227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTACAGAAAAACTGAG	8863	False	NA	NA	False	NA	NA	NA	108285978	108296839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_108286000_108296800
ES.29181.46	chr6	+	7599	43	NIC	ENSMUSG00000030102.12	novel	9761	62	NA	NA	-5331	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	22.1394262575013	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108359063	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108408421_108408458_108409609_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.48	chr6	+	5024	25	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-9181	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	8.14921604954871	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108383049	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.49	chr6	+	4650	23	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	3	8	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	17.3745800829215	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTGGTGGCTTTCATT	7033	False	NA	12	True	AATAAA	-23	NA	108393767	108528078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108393920_108394849_108394962_108409606_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.5	chr6	+	5481	39	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	1	133050	1	-942	5prime_fragment	FALSE	non_canonical	0	0	junction_26	14.4502441774076	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAAGCCCCTTAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	108190057	108395020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849
ES.29181.50	chr6	+	4591	22	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	7.42796090287255	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	7033	False	NA	4	True	AATAAA	-15	NA	108393767	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.53	chr6	+	4328	20	ISM	ENSMUSG00000030102.12	ENSMUST00000203615.3	9761	62	225096	1	-20405	-1	3prime_fragment	FALSE	canonical	3	64	junction_11	5.92800761118161	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108415258	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.54	chr6	+	4281	20	NNC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-20363	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.3603511152372	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108415300	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108415394_108417457_108417643_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.55	chr6	+	1738	11	NNC	ENSMUSG00000030102.12	novel	619	2	NA	NA	-623	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.540608744918	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCTGAAGCCTG	NA	False	NA	NA	False	AATAAA	-22	NA	108435040	108476646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108435093_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476429_108476584
ES.29181.56	chr6	+	4199	19	NNC	ENSMUSG00000030102.12	novel	486	2	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8237438713273	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108435752	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108435949_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.57	chr6	+	4156	19	NIC	ENSMUSG00000030102.12	novel	486	2	NA	NA	95	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.8237438713273	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTGACTGGCTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	108435758	108528069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108435913_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.58	chr6	+	4612	14	ISM	ENSMUSG00000030102.12	ENSMUST00000203615.3	9761	62	270685	0	-9915	0	3prime_fragment	FALSE	canonical	3	64	junction_5	6.46428513050907	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108460847	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.59	chr6	+	3760	1	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	-3915	-5988	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGTGTAAAAGACTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	108466847	108470607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108466800_108470600
ES.29181.6	chr6	+	9024	60	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	-803	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	17.2861248415245	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAATGCTGCTGCTGCTG	NA	False	NA	NA	False	AATAAA	-10	NA	108190057	108527267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108409606_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.60	chr6	+	1815	9	ISM	ENSMUSG00000030102.12	ENSMUST00000203615.3	9761	62	292673	803	-2438	-803	3prime_fragment	FALSE	canonical	3	70	junction_2	6.12244844812923	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAATGCTGCTGCTGCTG	9714	False	NA	NA	False	AATAAA	-10	NA	108482835	108527267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29181.8	chr6	+	5679	37	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	-1629	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_25	17.3493515728975	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	TATAAA	-23	NA	108190057	108394333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770
ES.29181.9	chr6	+	10777	58	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_25	14.320905518586	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190057	108528070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ES.29182.1	chr6	-	8171	2	Antisense	novelGene_ENSMUSG00000030102.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGTTTCTCTCTCAGG	NA	False	NA	NA	False	ACTAAA	-13	NA	108271248	108262588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108262700_108263188
ES.29183.1	chr6	+	178	1	Intergenic	novelGene_24228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	108537832	108538010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_108537800_108538000
ES.29184.1	chr6	+	2845	6	Fusion	ENSMUSG00000090576.3_ENSMUSG00000030103.12	novel	3113	5	NA	NA	-1739	-149	multi-exon	FALSE	canonical	1	3	junction_1	96.8677448896174	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTCTCCTTGGTTTTA	NA	False	NA	13	True	AATAAA	-25	NA	108635850	108643737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_108635950_108637807_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.10	chr6	+	5448	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	54	-2389	54	2389	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTTCTGAGTATT	NA	False	NA	NA	False	AATAAA	-31	NA	108637643	108646275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.11	chr6	+	2596	4	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	531	154	286	-154	3prime_fragment	FALSE	canonical	3	205	junction_2	23.0362033908947	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAAATGGTCTCCTTGG	NA	False	NA	8	True	AATAAA	-20	NA	108638120	108643732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.2	chr6	+	2605	6	Fusion	ENSMUSG00000090576.3_ENSMUSG00000030103.12	novel	3113	5	NA	NA	-1726	-376	multi-exon	FALSE	canonical	1	3	junction_1	96.8677448896174	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGTCTATTTGTATAA	NA	False	NA	NA	False	NA	NA	NA	108635863	108643510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_108635950_108637807_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.3	chr6	+	3860	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-893	146	-893	-146	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCCTTGGTTTTAAAA	NA	False	NA	16	True	AATAAA	-28	NA	108636696	108643740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.4	chr6	+	2862	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-706	957	-706	303	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGGCTTTTGTGAGTA	NA	False	NA	9	True	AATAAA	-21	NA	108636883	108642929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.5	chr6	+	3448	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	-702	367	-702	-367	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTATAATTACTTGAT	NA	False	NA	NA	False	NA	NA	NA	108636887	108643519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.6	chr6	+	4789	4	FSM	ENSMUSG00000030103.12	ENSMUST00000163617.2	476	4	-242	-4071	3	-155	multi-exon	FALSE	canonical	3	205	junction_3	26.8824602048746	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAAATGGTCTCCTTG	NA	False	NA	7	True	AATAAA	-19	NA	108637592	108643731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481
ES.29184.7	chr6	+	3226	4	NIC	ENSMUSG00000030103.12	novel	3113	5	NA	NA	9	-152	intron_retention	FALSE	canonical	3	205	junction_2	23.9072281027215	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAATGGTCTCCTTGGTT	NA	False	NA	10	True	AATAAA	-22	NA	108637598	108643734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108637954_108638121_108638574_108639481_108639606_108641439
ES.29184.8	chr6	+	3078	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	24	11	24	-11	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAATAGGTAAATGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	108637613	108643875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ES.29184.9	chr6	+	2960	4	NIC	ENSMUSG00000030103.12	novel	3113	5	NA	NA	38	-389	intron_retention	FALSE	canonical	3	205	junction_2	23.9072281027215	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAATGTTTCAGATG	NA	False	NA	NA	False	NA	NA	NA	108637627	108643497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108637954_108638121_108638574_108639481_108639606_108641439
ES.29185.1	chr6	-	1806	7	NNC	ENSMUSG00000087341.5	novel	1734	7	NA	NA	71	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.471404520791032	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTACATAAAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	108637824	108553991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108554985_108555476_108555552_108558983_108559210_108559502_108559713_108576965_108577176_108590909_108590955_108637777
ES.29185.10	chr6	-	3625	3	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-2257	110	intron_retention	FALSE	canonical	3	14	junction_2	13.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACAGAAGTCTTGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	108593213	108587183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589374_108590092
ES.29185.11	chr6	-	3103	1	Intergenic	novelGene_24229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTCTTTGTCATT	NA	False	NA	NA	False	TATAAA	-20	NA	108631830	108628727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_108628700_108631800
ES.29185.12	chr6	-	1889	1	Antisense	novelGene_ENSMUSG00000090576.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	108635762	108633873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108633900_108635800
ES.29185.13	chr6	-	2257	5	NNC	ENSMUSG00000087341.5	novel	1734	7	NA	NA	-4994	-50155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGTAGAAGCTACGTG	NA	False	NA	NA	False	NA	NA	NA	108642889	108637448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108637953_108638120_108638190_108638463_108638574_108639481_108639603_108641436
ES.29185.14	chr6	-	1761	2	Antisense	novelGene_ENSMUSG00000030103.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGACACGTGTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	108642882	108639287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108639603_108641436
ES.29185.15	chr6	-	3603	1	Antisense	novelGene_ENSMUSG00000030103.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGACACGTGTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	108642890	108639287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108639300_108642900
ES.29185.16	chr6	-	2833	1	Antisense	novelGene_ENSMUSG00000030103.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTCATCCTGCCAAG	NA	False	NA	NA	False	NA	NA	NA	108642889	108640056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108640100_108642900
ES.29185.2	chr6	-	749	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9166	117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.0656759649376	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCTTGTGTCAGTAGA	NA	False	NA	-2	True	AATAAA	-19	NA	108600122	108587176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108600032
ES.29185.3	chr6	-	9913	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9171	116	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	18.0693109995927	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTTGTGTCAGTAG	NA	False	NA	-3	True	AATAAA	-18	NA	108600127	108587177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590321_108590404_108590909
ES.29185.4	chr6	-	774	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9179	115	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14.0779082253011	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTCTTGTGTCAGTA	NA	False	NA	-4	True	AATAAA	-17	NA	108600135	108587178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108599998
ES.29185.5	chr6	-	869	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9178	115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.8271917913444	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGTCTTGTGTCAGTA	NA	False	NA	-4	True	AATAAA	-17	NA	108600134	108587178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590810_108590955_108600001
ES.29185.6	chr6	-	727	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9170	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.1292697334007	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600126	108587181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909_108590955_108600033
ES.29185.7	chr6	-	778	5	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9166	112	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	9.35414346693485	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600122	108587181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909_108590955_108599998
ES.29185.8	chr6	-	8733	4	FSM	ENSMUSG00000087341.5	ENSMUST00000204759.2	544	4	-8077	-112	-8077	112	multi-exon	FALSE	canonical	3	37	junction_2	5.43650214343336	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108599033	108587181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909
ES.29185.9	chr6	-	9764	4	NNC	ENSMUSG00000087341.5	novel	544	4	NA	NA	-9128	112	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	15.2970585407784	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGAAGTCTTGTGTCA	NA	False	NA	-7	True	AATAAA	-14	NA	108600084	108587181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_108587583_108589268_108589374_108590092_108590176_108590909
ES.29186.1	chr6	-	178	1	Intergenic	novelGene_24230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTGGATT	NA	False	NA	NA	False	NA	NA	NA	108707085	108706907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_108706900_108707100
ES.29187.1	chr6	-	182	1	Intergenic	novelGene_24231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACTTATTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	108747963	108747781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_108747800_108748000
ES.29188.1	chr6	+	2504	7	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-1032	-1725	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	192.985894706208	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTTTACCTTAAAATGT	NA	False	NA	24	True	AATAAA	-24	NA	108759027	108800514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108759093_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.10	chr6	+	3261	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-45	1227	-45	-1227	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGCCATAATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108760014	108801012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.11	chr6	+	2619	7	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	192.355284709195	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATGCCTCCTGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	108760015	108802238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108800330
ES.29188.12	chr6	+	4481	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-38	0	-38	0	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCTCCTGTGTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	108760021	108802239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.13	chr6	+	2531	8	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-36	-1731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	180.053846821172	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGACAATTTTACCTTA	NA	False	NA	18	True	AATAAA	-18	NA	108760023	108800508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463_108800185_108800401
ES.29188.14	chr6	+	2504	4	NIC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-33	-1723	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	223.053057963048	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTACCTTAAAATGTAT	NA	False	NA	26	True	AATAAA	-26	NA	108760026	108800516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108760339_108795205_108795274_108795503_108795575_108798463
ES.29188.15	chr6	+	2369	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-17	2091	-17	1414	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGTAGCCCGACATGA	NA	False	NA	NA	False	AATAAA	-17	NA	108760042	108800148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.16	chr6	+	5873	3	NIC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-17	-1227	intron_retention	FALSE	canonical	0	0	junction_1	243.5	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGCCATAATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108760042	108801012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108760339_108795205_108795274_108795503
ES.29188.17	chr6	+	2897	7	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-17	-1561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.369334592098	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTTGGTATCATGGT	NA	False	NA	10	True	AATAAA	-14	NA	108760042	108800678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108760339_108790587_108790669_108791944_108792017_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.18	chr6	+	5474	11	Fusion	ENSMUSG00000030104.10_ENSMUSG00000030105.9	novel	4443	7	NA	NA	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	99.461349276993	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108760056	108836317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_108760339_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.19	chr6	+	3652	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-3	794	-3	-794	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATTGTTATCATTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	108760056	108801445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.2	chr6	+	3920	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-1032	1555	-1032	-1555	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATCATGGTCCCCTC	NA	False	NA	16	True	AATAAA	-20	NA	108759027	108800684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.20	chr6	+	5617	6	ISM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	1715	0	-1715	intron_retention	FALSE	canonical	3	487	junction_5	27.8969532386603	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAATGTATCATGATGA	NA	False	NA	34	True	AATAAA	-34	NA	108760059	108800524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503
ES.29188.21	chr6	+	2336	17	Fusion	ENSMUSG00000030104.10_ENSMUSG00000030105.9	novel	4443	7	NA	NA	2	233	multi-exon	FALSE	canonical	0	0	junction_6	157.503062966248	696	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACTAGAAATGGGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	108760061	108832719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828249_108829450_108829548_108831205_108831410_108832427
ES.29188.23	chr6	+	6102	6	ISM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	3	1227	3	-1227	intron_retention	FALSE	canonical	3	487	junction_5	27.8969532386603	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAGCCATAATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108760062	108801012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503
ES.29188.25	chr6	+	1996	5	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	20082	-1413	20082	1413	3prime_fragment	FALSE	canonical	3	458	junction_4	28.1547065337219	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTGTAGCCCGACATG	8684	False	NA	NA	False	AATAAA	-16	NA	108791939	108800147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.26	chr6	+	5199	2	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	23396	-1948	23396	-1557	intron_retention	FALSE	canonical	3	487	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTATCATGGTCCCC	352	False	NA	14	True	AATAAA	-18	NA	108795253	108800682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108795274_108795503
ES.29188.27	chr6	+	6075	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-250	-8	-217	0	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805384	108836317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.28	chr6	+	4630	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-208	1395	-175	-1395	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGTGCTGAAATATG	NA	False	NA	NA	False	AATATA	-16	NA	108805426	108834914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.29	chr6	+	6031	13	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	121.143853881794	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805469	108836317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108828422_108828464_108829450_108829548_108831205_108831410_108832427
ES.29188.3	chr6	+	2667	7	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-1031	-1561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.985894706208	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTTGGTATCATGGT	NA	False	NA	10	True	AATAAA	-14	NA	108759028	108800678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108759093_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.30	chr6	+	8012	12	NNC	ENSMUSG00000030104.10	novel	803	3	NA	NA	-129	2640	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	94.0284817058152	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGTATTTTGTGTGAC	NA	False	NA	5	True	AATAAA	-16	NA	108805472	108838957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108805580_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.31	chr6	+	5882	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-161	96	-128	-96	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTTCTTTTATAAGC	NA	False	NA	-86	True	ATTAAA	-22	NA	108805473	108836213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.32	chr6	+	2488	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-160	3489	-127	334	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATAGCACCCAGTCTCC	NA	False	NA	NA	False	NA	NA	NA	108805474	108832820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.33	chr6	+	6196	12	FSM	ENSMUSG00000030104.10	ENSMUST00000204804.3	6077	12	-119	0	-119	0	multi-exon	FALSE	canonical	3	7	junction_9	94.2706671117053	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805482	108836317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828464_108829450_108829548_108831205_108831410_108832427
ES.29188.34	chr6	+	2179	11	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-118	235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.944985016592	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAGAAATGGGAAGCT	NA	False	NA	NA	False	AATAAA	-24	NA	108805483	108832721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813763_108819973_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.35	chr6	+	2175	11	NIC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-97	235	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	99.1403046192617	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAGAAATGGGAAGCT	NA	False	NA	NA	False	AATAAA	-24	NA	108805504	108832721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.36	chr6	+	5336	12	NNC	ENSMUSG00000030104.10	novel	803	3	NA	NA	-97	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	94.0284817058152	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACTGTGTTTCTCCTTTG	NA	False	NA	14	True	ATTAAA	-19	NA	108805504	108836313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108805580_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.37	chr6	+	3671	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-130	2276	-97	1547	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGTTTCAGTAGTAACTA	NA	False	NA	NA	False	AATAAA	-31	NA	108805504	108834033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.39	chr6	+	3560	11	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-96	231	intron_retention	FALSE	canonical	3	297	junction_5	22.3928560036454	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAACTAGAAATGGGA	NA	False	NA	NA	False	AATAAA	-20	NA	108805505	108832717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108829548_108831205_108831410_108832427
ES.29188.4	chr6	+	2808	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-61	1696	-61	-1696	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACGCAGACCTTTGGA	NA	False	NA	53	True	NA	NA	NA	108759998	108800543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.40	chr6	+	5865	11	NIC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-87	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	99.1679887867048	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCACTGTGTTTCTCCT	NA	False	NA	11	True	ATTAAA	-16	NA	108805514	108836310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.41	chr6	+	5378	13	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-87	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.1568710888607	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTTTCTCCTTT	NA	False	NA	13	True	ATTAAA	-18	NA	108805514	108836312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108805580_108806141_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.42	chr6	+	3827	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-118	2108	-85	1715	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTGTTTTACATATTT	NA	False	NA	NA	False	NA	NA	NA	108805516	108834201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.45	chr6	+	8574	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-109	-2648	-76	2640	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGTATTTTGTGTGAC	NA	False	NA	5	True	AATAAA	-16	NA	108805525	108838957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.46	chr6	+	2736	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-108	3189	-75	634	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTAAAGCTAAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	108805526	108833120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.47	chr6	+	5676	9	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	138.601440739265	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805539	108836317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108831205_108831410_108832427
ES.29188.48	chr6	+	5059	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-74	832	-41	-832	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTTCCCTTCTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	108805560	108835477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.49	chr6	+	2604	13	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-15	234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	140.445323485294	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTAGAAATGGGAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	108805586	108832720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108827066_108827176_108828170_108828464_108829450_108829548_108831205_108831410_108832427
ES.29188.5	chr6	+	1632	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-57	2868	-57	637	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCACGTCTGTTCTTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	108760002	108799371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.50	chr6	+	2083	10	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	16	243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	102.41322734785	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGAAGCTTCGTGGAG	NA	False	NA	NA	False	AATAAA	-32	NA	108805617	108832729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108831205_108831410_108832427
ES.29188.51	chr6	+	5784	11	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.3106741493582	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCACTGTGTTTCTC	NA	False	NA	9	True	ATTAAA	-14	NA	108805617	108836308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108829425_108829548_108831205_108831410_108832427
ES.29188.52	chr6	+	3691	12	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	16	1712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	96.2318137804285	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTATCTGTTTTACATA	NA	False	NA	NA	False	NA	NA	NA	108805617	108834198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828226_108829463_108829548_108831205_108831410_108832427
ES.29188.53	chr6	+	1954	7	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-7	-3948	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	117.056491585141	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCCCCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108805627	108824655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823927_108824095
ES.29188.54	chr6	+	2113	11	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-7	235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	99.1881545347024	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAGAAATGGGAAGCT	NA	False	NA	NA	False	AATAAA	-24	NA	108805627	108832721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828232_108831218_108831410_108832427
ES.29188.55	chr6	+	5770	13	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	92.1568710888607	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCACTGTGTTTCTCCT	NA	False	NA	11	True	ATTAAA	-16	NA	108805627	108836310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826390_108826444_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.56	chr6	+	2279	13	NNC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-7	233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	122.069965138395	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACTAGAAATGGGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	108805627	108832719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828249_108828422_108828464_108829450_108829548_108831205_108831410_108832427
ES.29188.57	chr6	+	5878	13	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	122.248040202423	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCACTGTGTTTCTCCT	NA	False	NA	11	True	ATTAAA	-16	NA	108805627	108836310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108828422_108828476_108829450_108829548_108831205_108831410_108832427
ES.29188.58	chr6	+	7027	11	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	297	junction_5	22.3928560036454	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCACTGTGTTTCT	NA	False	NA	8	True	ATTAAA	-13	NA	108805628	108836307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108829548_108831205_108831410_108832427
ES.29188.6	chr6	+	4078	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	-49	414	-49	-414	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTTTAGTGTACTTT	NA	False	NA	7	True	AGTAAA	-18	NA	108760010	108801825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.60	chr6	+	5125	12	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	-5	-832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.2546553559149	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTTCCCTTCTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	108805629	108835477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108822107_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.61	chr6	+	6157	13	NNC	ENSMUSG00000030104.10	novel	5817	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	141.293921391623	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCACTGTGTTTCTCC	NA	False	NA	10	True	ATTAAA	-15	NA	108805634	108836309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108827066_108827176_108828170_108828476_108829450_108829548_108831205_108831410_108832427
ES.29188.62	chr6	+	5070	10	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	3	229	intron_retention	FALSE	canonical	3	297	junction_5	21.9646180127141	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGATAAAACTAGAAATGG	NA	False	NA	NA	False	AATAAA	-18	NA	108805637	108832715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108829548_108831205_108831410_108832427
ES.29188.63	chr6	+	8289	10	NIC	ENSMUSG00000030104.10	novel	6077	12	NA	NA	5	2640	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	102.41322734785	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGTATTTTGTGTGAC	NA	False	NA	5	True	AATAAA	-16	NA	108805639	108838957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108831205_108831410_108832427
ES.29188.64	chr6	+	5080	9	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	14251	2	-5707	-2	3prime_fragment	FALSE	canonical	3	297	junction_2	21.0475651798492	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCACTGTGTTTCT	4890	False	NA	8	True	ATTAAA	-13	NA	108819885	108836307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.65	chr6	+	4726	7	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	17996	0	-1962	0	3prime_fragment	FALSE	canonical	3	304	junction_4	17.1269767715535	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCACTGTGTTTCTCC	1292	False	NA	10	True	ATTAAA	-15	NA	108823630	108836309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.66	chr6	+	4435	5	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	20719	-5	761	-3	3prime_fragment	FALSE	canonical	3	304	junction_2	19.6134520164096	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGTTTCTCCTTTGC	4015	False	NA	15	True	ATTAAA	-20	NA	108826353	108836314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ES.29188.7	chr6	+	2795	5	NIC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-48	-1557	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	225.793600440757	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTATCATGGTCCCC	NA	False	NA	14	True	AATAAA	-18	NA	108760011	108800682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108798463
ES.29188.8	chr6	+	4084	7	NNC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-48	-413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	191.369334592098	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTTTAGTGTACTTTG	NA	False	NA	8	True	AGTAAA	-19	NA	108760011	108801826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792212_108792313_108795205_108795274_108795503_108795575_108798463
ES.29188.9	chr6	+	2619	5	NIC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	-46	-1731	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	225.793600440757	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGACAATTTTACCTTA	NA	False	NA	18	True	AATAAA	-18	NA	108760013	108800508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108798463
ES.29189.1	chr6	-	435	1	Antisense	novelGene_ENSMUSG00000030105.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTTCAA	NA	False	NA	NA	False	NA	NA	NA	108799732	108799297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108799300_108799700
ES.2919.1	chr10	-	1223	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	-5	551	-5	4	multi-exon	FALSE	canonical	3	105	junction_3	8.33999733546454	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTGAATGACTGACTCAC	NA	False	NA	-6	True	AATAAA	-25	NA	61946834	61943984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
ES.2919.2	chr10	-	1120	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	13	2	13	0	multi-exon	FALSE	canonical	3	38	junction_2	41.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	-12	True	AATAAA	-19	NA	61946816	61943990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_61944903_61945662_61945792_61946737
ES.2919.3	chr10	-	1233	4	NNC	ENSMUSG00000020083.14	novel	1769	4	NA	NA	179	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	57.9885046079537	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	-12	True	AATAAA	-19	NA	61946096	61943990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61944903_61945315_61945426_61945662_61945792_61946014
ES.2919.4	chr10	-	2574	2	NIC	ENSMUSG00000020083.14	novel	594	3	NA	NA	5	0	intron_retention	FALSE	canonical	3	124	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	-12	True	AATAAA	-19	NA	61946787	61943990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61945792_61946014
ES.2919.6	chr10	-	1478	4	NNC	ENSMUSG00000020083.14	novel	1493	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.7600400122976	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	-12	True	AATAAA	-19	NA	61946730	61943990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_61944903_61945662_61945792_61946014_61946098_61946376
ES.2919.7	chr10	-	2799	1	NIC	ENSMUSG00000020083.14	novel	1769	4	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGCCGGTGAATGACT	NA	False	NA	-13	True	AATAAA	-18	NA	61946790	61943991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_61944000_61946800
ES.29190.1	chr6	-	4349	1	Antisense	novelGene_ENSMUSG00000030104.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTAAGCTTTCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	108813736	108809387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_108809400_108813700
ES.29191.1	chr6	+	174	1	Intergenic	novelGene_24232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	109224397	109224571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_109224400_109224600
ES.29192.1	chr6	-	3816	1	Intergenic	novelGene_24233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	110315060	110311244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_110311200_110315100
ES.29193.1	chr6	-	1509	1	Intergenic	novelGene_24234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110675168	110673659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_110673700_110675200
ES.29194.1	chr6	-	179	1	Intergenic	novelGene_24235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTTTA	NA	False	NA	NA	False	NA	NA	NA	111042266	111042087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_111042100_111042300
ES.29195.1	chr6	-	179	1	Intergenic	novelGene_24236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAAATCCTAGAATTGAG	NA	False	NA	NA	False	NA	NA	NA	111142517	111142338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_111142300_111142500
ES.29196.1	chr6	-	3215	1	Intergenic	novelGene_24237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATAGAAGGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	111964262	111961047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_111961000_111964300
ES.29197.1	chr6	-	4129	1	Intergenic	novelGene_24238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	112218720	112214591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_112214600_112218700
ES.29198.1	chr6	+	2723	1	FSM	ENSMUSG00000083443.2	ENSMUST00000120088.2	1566	1	-38	-1119	-38	1119	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCATCTGTCACTAATG	NA	False	NA	NA	False	AATAAA	-41	NA	112540564	112543287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_112540600_112543300
ES.29199.1	chr6	-	3313	1	Intergenic	novelGene_24239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTTGA	NA	False	NA	NA	False	NA	NA	NA	112579869	112576556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_112576600_112579900
ES.292.1	chr1	+	766	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	-47	146	-12	-146	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGCTGTTATTTGT	NA	False	NA	8	True	TTTAAA	-15	NA	36730517	36732616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ES.292.2	chr1	+	540	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	53	272	53	23	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTTTTTTTTTAATAT	NA	False	NA	46	True	NA	NA	NA	36730617	36732490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ES.292.3	chr1	+	809	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	55	1	55	-1	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCTAAAAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	36730619	36732761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ES.292.4	chr1	+	1395	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	66	-596	-60	596	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTGAAATTTGCC	NA	False	NA	NA	False	TATAAA	-17	NA	36730630	36733358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ES.292.5	chr1	+	2521	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	76	-1732	-50	1732	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCACTGCATTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	36730640	36734494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ES.292.6	chr1	+	655	3	NIC	ENSMUSG00000061518.12	novel	625	4	NA	NA	-46	0	intron_retention	FALSE	canonical	3	7132	junction_2	86.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGGCTAGTCTTATGT	NA	False	NA	22	True	AATAAA	-27	NA	36730644	36732466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36730771_36731291_36731632_36732277
ES.292.7	chr1	+	1428	3	ISM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	80	3	-46	-3	intron_retention	FALSE	canonical	3	7223	junction_2	41	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTGGCTAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	36730644	36732759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_36730771_36731291_36731366_36731531
ES.292.8	chr1	+	1291	2	FSM	ENSMUSG00000061518.12	ENSMUST00000192859.2	345	2	-66	-880	-34	1	multi-exon	FALSE	canonical	3	7305	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTAGTCTTATGTCT	NA	False	NA	24	True	AATAAA	-29	NA	36730656	36732468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36730771_36731291
ES.292.9	chr1	+	1646	2	FSM	ENSMUSG00000061518.12	ENSMUST00000191790.6	757	2	-52	-837	-34	1	multi-exon	FALSE	canonical	3	7223	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTAGTCTTATGTCT	NA	False	NA	24	True	AATAAA	-29	NA	36730656	36732468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36731366_36731531
ES.2920.1	chr10	+	1847	2	FSM	ENSMUSG00000044312.5	ENSMUST00000050103.2	1540	2	-85	-222	-85	222	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGGTGACTCCATTGT	9179	False	NA	NA	False	AATAAA	-20	NA	61968783	61970764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_61969107_61969240
ES.2920.2	chr10	+	1600	2	NNC	ENSMUSG00000044312.5	novel	1540	2	NA	NA	26	226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGACTCCATTGTGCGC	9298	False	NA	NA	False	AATAAA	-24	NA	61968902	61970768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_61969107_61969372
ES.29200.1	chr6	+	6181	1	Antisense	novelGene_ENSMUSG00000030254.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACCCCACCGACA	NA	False	NA	NA	False	NA	NA	NA	112665461	112671642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_112665500_112671600
ES.29201.1	chr6	+	1546	5	Intergenic	novelGene_24242	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.1650635094611	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTTCTAGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	112673740	112681630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_112673873_112674250_112674626_112678249_112678340_112679687_112679839_112680832
ES.29201.2	chr6	+	1144	3	Intergenic	novelGene_24243	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTTCTAGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	112679443	112681630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_112679666_112679703_112679828_112680832
ES.29202.1	chr6	+	1495	1	Intergenic	novelGene_24245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAACTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	112777650	112779145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_112777600_112779100
ES.29203.1	chr6	+	1874	1	Intergenic	novelGene_24246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTAGCCAGAGTCACC	NA	False	NA	NA	False	NA	NA	NA	112827051	112828925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_112827100_112828900
ES.29204.1	chr6	-	7008	1	Intergenic	novelGene_24240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAAGAGCCATTTGAT	NA	False	NA	NA	False	AATAAA	-22	NA	112593047	112586039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_112586000_112593000
ES.29204.10	chr6	-	4982	14	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-33264	2240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	80.7536981401695	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	112706911	112594570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504_112673653_112706814
ES.29204.11	chr6	-	4952	14	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	2239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.0426362077578	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	112673618	112594571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.12	chr6	-	4799	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	16	-2238	0	2238	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112673631	112594572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.13	chr6	-	4861	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	2236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.1852582077021	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	112673608	112594574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.14	chr6	-	5066	14	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	2232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	113.264731528769	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGCTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	112673618	112594578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112658993_112659201_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.15	chr6	-	3939	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	3	1318	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATATAGCTGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	112673628	112595492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.16	chr6	-	2996	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	6	363	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	83.2571318266489	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAGTGTAAATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	112673625	112596447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626814_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.17	chr6	-	2543	12	NNC	ENSMUSG00000030254.17	novel	2577	12	NA	NA	1	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9579434907672	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112673608	112596829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.18	chr6	-	2614	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	6	-19	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	87.4748773458224	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112673625	112596829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.19	chr6	-	3792	5	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	23046	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.4556598152341	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112629691	112596829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621650_112626555_112628192_112628735
ES.29204.2	chr6	-	3564	1	Intergenic	novelGene_24241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTGTGTATATAGCAT	NA	False	NA	NA	False	NA	NA	NA	112593469	112589905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_112589900_112593500
ES.29204.20	chr6	-	2614	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-7	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.1852582077021	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112673616	112596829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.21	chr6	-	5110	4	ISM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	43225	-106	22331	-19	3prime_fragment	FALSE	canonical	3	44	junction_1	88.3037686373325	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTATTTCCCAGTTTT	NA	False	NA	-3	True	CATAAA	-21	NA	112630406	112596829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555
ES.29204.22	chr6	-	2597	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	3	-24	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCTTTATTTCCCA	NA	False	NA	-8	True	CATAAA	-16	NA	112673628	112596834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.23	chr6	-	3992	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-1	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	82.1202962461507	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGCCTTTATTTCC	NA	False	NA	-10	True	CATAAA	-14	NA	112673606	112596836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112672085
ES.29204.25	chr6	-	2891	12	NNC	ENSMUSG00000030254.17	novel	2577	12	NA	NA	1	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.1003867270232	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTCATAAAATTTGTTT	NA	False	NA	-35	True	AATAGA	-22	NA	112673608	112596861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112648680_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.26	chr6	-	4712	3	ISM	ENSMUSG00000030254.17	ENSMUST00000142079.2	724	7	22633	-929	22633	43	3prime_fragment	FALSE	canonical	3	81	junction_1	89	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTCATAAAATTTGTT	NA	False	NA	-36	True	AATAGA	-21	NA	112630104	112596862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112597866_112621548_112621709_112626555
ES.29204.27	chr6	-	2505	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	19	53	3	42	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTCATAAAATTTGT	NA	False	NA	-37	True	AATAGA	-20	NA	112673628	112596863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.29	chr6	-	2665	14	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	3	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.0426362077578	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGCATTTGTCATAAAA	NA	False	NA	-42	True	AATAGA	-15	NA	112673628	112596868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.3	chr6	-	6774	12	NNC	ENSMUSG00000030254.17	novel	2577	12	NA	NA	1	4212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.9579434907672	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112673608	112592598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.30	chr6	-	2161	11	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	2	37	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.6765855728239	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGCATTTGTCATAAAA	NA	False	NA	-42	True	AATAGA	-15	NA	112673629	112596868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112605422_112605486_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.31	chr6	-	2510	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.1852582077021	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCAATGTGTAATGTC	NA	False	NA	-109	True	CATAAA	-16	NA	112673618	112596935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.32	chr6	-	2250	2	ISM	ENSMUSG00000030254.17	ENSMUST00000113182.8	2220	12	66230	623	45402	263	3prime_fragment	FALSE	canonical	3	44	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCAGTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	112607335	112597528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112597866_112605422
ES.29204.33	chr6	-	1826	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	31	720	-7	261	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCTTAGTCAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	112673616	112597530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.34	chr6	-	1782	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-11	148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	99.7971553814147	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATGCTTCTTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	112673583	112597643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.35	chr6	-	1711	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	32	834	-6	147	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCATGCTTCTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	112673615	112597644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.36	chr6	-	1669	12	NNC	ENSMUSG00000030254.17	novel	2577	12	NA	NA	-6	128	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	78.0748740019042	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTAATAGTTAATTTA	NA	False	NA	NA	False	NA	NA	NA	112673615	112597663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.37	chr6	-	1743	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	123	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAATGTAATAGTTA	NA	False	NA	NA	False	NA	NA	NA	112673608	112597668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.38	chr6	-	4248	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	655	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCCATACATTCCTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	112673608	112602720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.39	chr6	-	3614	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTGTTGTATTT	NA	False	NA	-1	True	AATAAA	-23	NA	112673626	112603372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.4	chr6	-	6811	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	2	4212	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	80.9252055226855	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112673629	112592598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.40	chr6	-	3705	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.9653800423187	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673618	112603375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.41	chr6	-	3640	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.3596408840981	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673631	112603375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.42	chr6	-	3793	13	NNC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	91.0462336764496	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673601	112603375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112658993_112659201_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.43	chr6	-	3512	12	NNC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.3596408840981	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673598	112603375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621715_112626632_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.44	chr6	-	3620	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	71.6444388618873	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673621	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626814_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.45	chr6	-	8391	1	NIC	ENSMUSG00000030254.17	novel	2220	12	NA	NA	40970	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	9028	False	NA	-5	True	AATAAA	-19	NA	112611767	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112603400_112611800
ES.29204.46	chr6	-	3528	11	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	72.7808353895447	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673606	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112670429_112670512_112673504
ES.29204.47	chr6	-	3727	13	ISM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	-34	6441	-18	-1	5prime_fragment	FALSE	canonical	3	29	junction_3	81.0826053410279	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673665	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.49	chr6	-	3219	10	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.7280793599562	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673638	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.50	chr6	-	3658	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	95.8518460379814	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673619	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.51	chr6	-	3463	13	NNC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.6903368879471	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673608	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605302_112605430_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.52	chr6	-	3823	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	103.516873289119	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTATTTGTTGTTGTTGT	NA	False	NA	-5	True	AATAAA	-19	NA	112673608	112603376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112658993_112659201_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.54	chr6	-	3670	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.558830358557	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTTGTTGTTGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	112673608	112603377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.55	chr6	-	3578	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	68.4786266951199	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTTGTTGTTGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	112673618	112603377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.56	chr6	-	3482	10	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97.0041363506516	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTATTTGTTGTTGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	112673608	112603377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112670429_112670512_112673504
ES.29204.57	chr6	-	3770	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	91.4032579044946	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTTATTTGTTGTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	112673605	112603379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112658993_112659201_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.58	chr6	-	3600	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.5051023629	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTTATTTGTTGTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	112673618	112603379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.59	chr6	-	3548	12	NNC	ENSMUSG00000030254.17	novel	3535	12	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.6110938355963	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAGAGTTTATTTGTTG	NA	False	NA	-12	True	AATAAA	-12	NA	112673609	112603383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605418_112621518_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.6	chr6	-	6914	14	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	4211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.0426362077578	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	112673608	112592599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.60	chr6	-	3195	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	1	-398	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCTGTTTTATTATT	NA	False	NA	NA	False	NA	NA	NA	112673608	112603773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.61	chr6	-	1845	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-11	-1760	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCTTCATTCCTCC	NA	False	NA	NA	False	AATAAA	-16	NA	112673620	112605135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.62	chr6	-	1816	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-7	-1762	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	68.4786266951199	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCTGCTTCATTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	112673616	112605137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.63	chr6	-	1869	12	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	9	-1762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.3596408840981	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCTGCTTCATTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	112673622	112605137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.64	chr6	-	4196	10	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	-8	2271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.7280793599562	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCGATGAAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	112673617	112639040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112642148_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.65	chr6	-	2743	9	FSM	ENSMUSG00000030254.17	ENSMUST00000135092.2	2004	9	-4	-735	0	735	multi-exon	FALSE	canonical	3	205	junction_5	18.7112098753662	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTCATTTCTTTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	112673609	112640576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.66	chr6	-	179	1	Intergenic	novelGene_24244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAATAAA	4995	False	NA	NA	False	NA	NA	NA	112691659	112691480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_112691500_112691700
ES.29204.67	chr6	-	8885	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	2	0	2	0	multi-exon	TRUE	canonical	3	12	junction_1	6.19450418404635	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGTGGTTGTTTAC	6455	False	NA	-3	True	AATAAA	-22	NA	112924225	112694931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.68	chr6	-	3722	2	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	37210	-1585	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTCTAGTTTCCTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	112706688	112696519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112700163_112706609
ES.29204.69	chr6	-	5294	14	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	175810	1590	-4519	-1587	3prime_fragment	FALSE	canonical	3	12	junction_1	6.51443549530466	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGTCTAGTTTCCT	9977	False	NA	NA	False	ATTAAA	-18	NA	112748417	112696521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327
ES.29204.7	chr6	-	6859	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	4211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.1852582077021	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	112673631	112592599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112597866_112605422_112605486_112621548_112621712_112626534_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.70	chr6	-	5451	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	2	3434	2	-3431	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTCCTGCATGGCT	6455	False	NA	NA	False	NA	NA	NA	112924225	112698365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.71	chr6	-	5182	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-32	3737	-32	-3734	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTCGTTCTACTGATT	6421	False	NA	NA	False	NA	NA	NA	112924259	112698668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.72	chr6	-	4610	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-59	4336	-59	-4333	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGACGCTCCTTTTTT	6394	False	NA	NA	False	NA	NA	NA	112924286	112699267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.73	chr6	-	5873	21	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-8017	-4421	intron_retention	FALSE	canonical	0	0	junction_20	7.82224392358101	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGTGTCTGTAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	112814437	112699355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112814298
ES.29204.74	chr6	-	4481	22	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-39	-4422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	7.94396475091115	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTATGTGTCTGTAGGTGT	6414	False	NA	NA	False	NA	NA	NA	112924266	112699356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726364_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.75	chr6	-	3932	20	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-27	-4423	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.93776574484335	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTATGTGTCTGTAGGTG	6426	False	NA	NA	False	NA	NA	NA	112924254	112699357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112700163_112706609_112706760_112708289_112708471_112712794_112712875_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.76	chr6	-	3847	22	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-8107	-4429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	8.00085029494846	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTACGTATGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	112814527	112699363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112814298
ES.29204.77	chr6	-	4345	21	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	7	-4429	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.07387763097757	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTACGTATGTGTCTG	6460	False	NA	NA	False	NA	NA	NA	112924220	112699363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.78	chr6	-	4120	21	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	7	-4429	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.39509972887452	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTACGTATGTGTCTG	6460	False	NA	NA	False	NA	NA	NA	112924220	112699363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112700163_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.79	chr6	-	4214	21	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	13	-4429	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.85238817176023	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTACGTATGTGTCTG	6466	False	NA	NA	False	NA	NA	NA	112924214	112699363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.8	chr6	-	6833	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	2	4211	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	112673629	112592599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29204.80	chr6	-	3715	22	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-42165	-4430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	8.00085029494846	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTACGTATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	112848585	112699364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112848487
ES.29204.81	chr6	-	2168	11	NNC	ENSMUSG00000030257.17	novel	8300	22	NA	NA	16524	-4430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.4785495179438	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTACGTATGTGTCT	NA	False	NA	NA	False	NA	NA	NA	112727374	112699364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716062_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112727341
ES.29204.82	chr6	-	4506	21	NNC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	-61	-4432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	8.10108017489026	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGTGTACGTATGTGT	6392	False	NA	NA	False	NA	NA	NA	112924288	112699366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112743807_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.83	chr6	-	4402	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-38	4523	-38	-4520	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTCATATTGTCACTGG	6415	False	NA	NA	False	NA	NA	NA	112924265	112699454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.84	chr6	-	3849	21	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	101	8948	101	-8945	5prime_fragment	FALSE	canonical	3	12	junction_1	5.74695571585513	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCCATGCATGCATCC	6554	False	NA	NA	False	NA	NA	NA	112924126	112703879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.85	chr6	-	3986	20	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	2	11018	2	10036	5prime_fragment	FALSE	canonical	3	14	junction_14	5.12989176042577	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCCTTTTGTGCCAGT	6455	False	NA	NA	False	NA	NA	NA	112924225	112705949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.86	chr6	-	3419	20	ISM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	-48	11635	-48	9419	5prime_fragment	FALSE	canonical	3	14	junction_14	5.12989176042577	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGCTTGTTTGTGTC	6405	False	NA	NA	False	NA	NA	NA	112924275	112706566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ES.29204.87	chr6	-	5814	8	ISM	ENSMUSG00000030257.17	ENSMUST00000113169.9	8300	22	192563	11649	12746	9402	intron_retention	FALSE	canonical	3	18	junction_6	5.49953615854862	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCACTAGTACCC	6237	False	NA	NA	False	NA	NA	NA	112731152	112706583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322
ES.29204.9	chr6	-	6769	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	18	-4210	2	4210	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	112673629	112592600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ES.29205.1	chr6	+	2561	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	87	-485	-3	485	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCCTTTGAGAACAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	113023272	113045719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.10	chr6	+	2045	3	FSM	ENSMUSG00000030264.15	ENSMUST00000145054.8	558	3	8	-1495	8	0	multi-exon	FALSE	canonical	3	600	junction_1	91.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGTTGTTGTTTT	NA	False	NA	28	True	ATTAAA	-22	NA	113023295	113027998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023352_113024375_113024666_113026299
ES.29205.11	chr6	+	2034	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	226.77742392046	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023296	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023335_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.12	chr6	+	3002	4	ISM	ENSMUSG00000030264.15	ENSMUST00000137396.8	1764	5	22	2579	10	2251	5prime_fragment	FALSE	canonical	3	600	junction_1	74.7930478052606	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAACTACTAGGAAAACA	NA	False	NA	NA	False	NA	NA	NA	113023297	113035179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599
ES.29205.14	chr6	+	2796	12	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	316.617165915031	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023300	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026879_113027717_113027898_113030302_113030371_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.15	chr6	+	5059	9	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	600	junction_1	57.2755128741769	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023303	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.17	chr6	+	1974	9	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	236.833142739778	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023303	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.18	chr6	+	1891	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-13	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.576959311934	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAAGATGCTTGTGTG	NA	False	NA	19	True	AATAAA	-15	NA	113023304	113045133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036967_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.2	chr6	+	2079	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	88	-4	-2	4	multi-exon	FALSE	canonical	3	600	junction_1	54.2445309298778	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGCGTTATTTTCCAA	NA	False	NA	7	True	ATTAAA	-20	NA	113023273	113045238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.20	chr6	+	2289	12	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	306.761516652877	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023306	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113030302_113030371_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.21	chr6	+	3069	9	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-10	4	intron_retention	FALSE	canonical	3	639	junction_3	41.793951416443	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGCGTTATTTTCCAA	NA	False	NA	7	True	ATTAAA	-20	NA	113023307	113045238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.22	chr6	+	8795	8	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-9	-99	intron_retention	FALSE	canonical	3	600	junction_1	55.3828972348183	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGATGCTTGTGTGAC	NA	False	NA	21	True	AATAAA	-17	NA	113023308	113045135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.23	chr6	+	1928	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-9	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	228.932358331796	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGCAAAGATGCTTG	NA	False	NA	15	True	AATAAA	-11	NA	113023308	113045129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026371_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.24	chr6	+	1752	4	NIC	ENSMUSG00000030264.15	novel	649	3	NA	NA	-5	1064	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	301.439877919296	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAAACAAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	113023312	113029062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717
ES.29205.25	chr6	+	2101	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023315	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.29	chr6	+	2096	11	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	10	-105	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	267.908211893551	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGCAAAGATGCTTG	NA	False	NA	15	True	AATAAA	-11	NA	113023327	113045129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.3	chr6	+	1976	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	90	97	0	-97	multi-exon	FALSE	canonical	3	600	junction_1	54.2445309298778	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATGCTTGTGTGACTA	NA	False	NA	23	True	AATAAA	-19	NA	113023275	113045137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.30	chr6	+	2943	9	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	11	-101	intron_retention	FALSE	canonical	3	639	junction_3	41.793951416443	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAAGATGCTTGTGTG	NA	False	NA	19	True	AATAAA	-15	NA	113023328	113045133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.31	chr6	+	1842	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	24	-96	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	287.199934660744	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTTGTGTGACTAT	NA	False	NA	24	True	AATAAA	-20	NA	113023341	113045138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113032939_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.33	chr6	+	2425	10	NNC	ENSMUSG00000030264.15	novel	692	4	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	227.705950734714	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023381	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023811_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.35	chr6	+	1933	10	NIC	ENSMUSG00000030264.15	novel	855	4	NA	NA	-37	-103	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGCAAAGATGCTTGTG	NA	False	NA	17	True	AATAAA	-13	NA	113023381	113045131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.36	chr6	+	686	4	NIC	ENSMUSG00000030264.15	novel	649	3	NA	NA	-36	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	333.530941426562	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTGTTGTTGTTT	NA	False	NA	27	True	ATTAAA	-21	NA	113023382	113027997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113027717
ES.29205.37	chr6	+	1138	4	FSM	ENSMUSG00000030264.15	ENSMUST00000155378.2	855	4	121	-404	-35	404	multi-exon	FALSE	canonical	3	79	junction_1	311.170192802731	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGACAATGTAAACTTC	NA	False	NA	NA	False	NA	NA	NA	113023383	113033332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599
ES.29205.38	chr6	+	4603	1	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-24	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTGTTGTTGTTT	NA	False	NA	27	True	ATTAAA	-21	NA	113023394	113027997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023400_113028000
ES.29205.39	chr6	+	2912	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	126	-96	intron_retention	FALSE	canonical	3	30	junction_3	282.28135863372	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTTGTGTGACTAT	NA	False	NA	24	True	AATAAA	-20	NA	113023544	113045138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113024666_113026299_113026378_113027717_113027898_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.4	chr6	+	2250	11	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_4	267.908211893551	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113023277	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.40	chr6	+	1794	7	ISM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	9247	2	-2478	-2	3prime_fragment	FALSE	canonical	3	639	junction_1	37.6017139089283	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTATGGAAGCGTTATT	NA	False	NA	1	True	ATTAAA	-14	NA	113032432	113045232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.41	chr6	+	4592	4	FSM	ENSMUSG00000030264.15	ENSMUST00000153310.2	692	4	-3625	-275	-3625	-102	multi-exon	FALSE	canonical	3	707	junction_1	22.905603390146	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCAAAGATGCTTGTGT	NA	False	NA	18	True	AATAAA	-14	NA	113038761	113045132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.42	chr6	+	4933	1	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-2086	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	False	NA	2	True	ATTAAA	-15	NA	113040300	113045233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113040300_113045200
ES.29205.43	chr6	+	135	1	Intergenic	novelGene_24249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	113040577	113040712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113040600_113040700
ES.29205.44	chr6	+	1073	1	Intergenic	novelGene_24250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACCTCTCAGTCCT	NA	False	NA	NA	False	AATACA	-9	NA	113045551	113046624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113045600_113046600
ES.29205.5	chr6	+	2214	12	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	2	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	306.761516652877	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGCAAAGATGCTTG	NA	False	NA	15	True	AATAAA	-11	NA	113023277	113045129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113030302_113030371_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.6	chr6	+	3122	3	FSM	ENSMUSG00000030264.15	ENSMUST00000145054.8	558	3	-5	-2559	-5	1064	multi-exon	FALSE	canonical	3	600	junction_1	91.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAAACAAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	113023282	113029062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113023352_113024375_113024666_113026299
ES.29205.7	chr6	+	5779	1	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	-4	1064	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAAACAAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	113023283	113029062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113023300_113029100
ES.29205.8	chr6	+	4197	12	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	2184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	337.922799144743	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTCAAGCCACATTTG	NA	False	NA	NA	False	NA	NA	NA	113023287	113047418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113030302_113030371_113032599_113032781_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29205.9	chr6	+	2017	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	1	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.253754496229	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGCAAAGATGCTTG	NA	False	NA	15	True	AATAAA	-11	NA	113023288	113045129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113023352_113024313_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ES.29206.1	chr6	-	3642	1	Intergenic	novelGene_24247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGATGACAAAAATCCAA	NA	False	NA	NA	False	AAAACA	-13	NA	113031642	113028000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113028000_113031600
ES.29207.1	chr6	-	312	1	Intergenic	novelGene_24248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACTCATCTTTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	113034220	113033908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113033900_113034200
ES.29208.1	chr6	-	6824	1	Genic_Genomic	ENSMUSG00000086429.10	novel	NA	NA	NA	NA	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	0	True	NA	NA	NA	113054182	113047358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_113047400_113054200
ES.29208.2	chr6	-	1106	2	FSM	ENSMUSG00000086429.10	ENSMUST00000159544.3	822	2	89	-373	-34	-3	multi-exon	FALSE	canonical	3	30	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGGAATGACTTTTT	NA	False	NA	-3	True	NA	NA	NA	113054205	113047361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113048397_113054134
ES.29208.3	chr6	-	1155	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	23	3	4	-3	multi-exon	FALSE	canonical	2	7	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGGAATGACTTTTT	NA	False	NA	-3	True	NA	NA	NA	113054148	113047361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113048397_113054028
ES.29208.4	chr6	-	1158	2	NNC	ENSMUSG00000086429.10	novel	1181	2	NA	NA	287	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGTCAAACTGTGGAAT	NA	False	NA	-11	True	NA	NA	NA	113053851	113047369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113048397_113053720
ES.29209.1	chr6	+	5654	24	NIC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	24.9546280148047	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGTGGGAAAG	7840	False	NA	NA	False	NA	NA	NA	113054322	113128817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087277_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.10	chr6	+	7021	23	NIC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	22.6378239762607	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCATAATGTTAACAATG	7850	False	NA	14	True	NA	NA	NA	113054332	113130387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087277_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.11	chr6	+	5634	25	NNC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	7	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.2052872027399	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAAGAGCCAATCTTA	7850	False	NA	NA	False	AAGAAA	-4	NA	113054332	113128828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087045_113087183_113087277_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092494_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.12	chr6	+	6938	23	NIC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	24.895484007485	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTAACAATGTGTTTG	7850	False	NA	20	True	NA	NA	NA	113054332	113130393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113054674_113081895_113082083_113086384_113086578_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.13	chr6	+	6776	23	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	24.0981549995049	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	7850	False	NA	10	True	NA	NA	NA	113054332	113130383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.14	chr6	+	7193	25	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	25.2517532394617	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	7851	False	NA	10	True	NA	NA	NA	113054333	113130383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.15	chr6	+	6856	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	27.729519938009	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	7856	False	NA	10	True	NA	NA	NA	113054338	113130383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113055342_113055429_113081895_113082083_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.16	chr6	+	5274	23	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	25.643978559569	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGTGGGAAAG	7871	False	NA	NA	False	NA	NA	NA	113054353	113128817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113086845_113086952_113087334_113087487_113087590_113087717_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.17	chr6	+	6717	23	NNC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	25.0878209562046	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATCATAATGTTAACAA	7968	False	NA	12	True	NA	NA	NA	113054450	113130385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113086845_113086952_113087277_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.18	chr6	+	6835	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.1889002149044	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	8066	False	NA	10	True	NA	NA	NA	113054548	113130383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094430_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.19	chr6	+	5209	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	7	11	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	23.2069672088392	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAAGAGCCAATCTTA	8087	False	NA	NA	False	AAGAAA	-4	NA	113054569	113128828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.2	chr6	+	5644	25	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	2	11	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	25.2517532394617	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAAGAGCCAATCTTA	7845	False	NA	NA	False	AAGAAA	-4	NA	113054327	113128828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086384_113086578_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.20	chr6	+	3913	20	NIC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	11	-4119	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	19.490462189068	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATCAGCAGTAGG	8091	False	NA	NA	False	NA	NA	NA	113054573	113124677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400
ES.29209.21	chr6	+	2804	5	ISM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	-1389	36035	-397	-1786	5prime_fragment	FALSE	canonical	3	31	junction_1	15.6584641647896	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACACTAGTGATGACTC	7800	False	NA	NA	False	AATAAA	-15	NA	113085436	113092761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488
ES.29209.22	chr6	+	6645	19	FSM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	-29	-1593	-29	4	multi-exon	FALSE	canonical	3	31	junction_1	20.3196675388376	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAATGTTAACAATGTG	9160	False	NA	16	True	NA	NA	NA	113086796	113130389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.23	chr6	+	6150	20	NNC	ENSMUSG00000034269.13	novel	6362	21	NA	NA	41	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	24.7207114259926	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAATGTTAACAATGTGT	592	False	NA	17	True	NA	NA	NA	113087418	113130390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113087487_113087590_113087717_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.24	chr6	+	5897	17	ISM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	1490	-1591	938	2	3prime_fragment	FALSE	canonical	3	33	junction_15	19.4091433028354	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCATAATGTTAACAATG	1489	False	NA	14	True	NA	NA	NA	113088315	113130387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.25	chr6	+	5475	15	ISM	ENSMUSG00000034269.13	ENSMUST00000149584.8	5023	19	5660	-1591	5108	2	3prime_fragment	FALSE	canonical	3	33	junction_13	20.5779999424787	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCATAATGTTAACAATG	5659	False	NA	14	True	NA	NA	NA	113092485	113130387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.26	chr6	+	3752	7	NNC	ENSMUSG00000034269.13	novel	3029	7	NA	NA	-171	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.5534626552818	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCATAATGTTAACAATG	448	False	NA	14	True	NA	NA	NA	113105470	113130387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113105503_113114913_113115162_113120700_113121045_113124400_113124700_113126474_113126650_113127062_113127152_113127822
ES.29209.27	chr6	+	8035	6	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	5980	-1575	5048	-4	3prime_fragment	FALSE	canonical	3	33	junction_4	25.0519460321948	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTTAACAATGTGTTT	3073	False	NA	19	True	NA	NA	NA	113110689	113130392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.28	chr6	+	4223	6	ISM	ENSMUSG00000034269.13	ENSMUST00000150107.2	3029	7	8217	0	7285	0	3prime_fragment	FALSE	canonical	3	33	junction_4	25.0519460321948	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGTGGGAAAG	5310	False	NA	NA	False	NA	NA	NA	113112926	113128817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.29	chr6	+	3770	6	NNC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	9297	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.6487741232872	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATCATAATGTTAACAA	7322	False	NA	12	True	NA	NA	NA	113114938	113130385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127831
ES.29209.3	chr6	+	1294	3	FSM	ENSMUSG00000034269.13	ENSMUST00000143998.8	2180	3	2	884	2	358	multi-exon	FALSE	canonical	3	52	junction_2	21	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTATTGGATAGCC	7845	False	NA	NA	False	AATAAA	-14	NA	113054327	113083638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113054674_113081895_113082083_113082877
ES.29209.30	chr6	+	4457	1	NIC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	16137	-2561	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACTATTTCAAGAACAC	795	False	NA	NA	False	NA	NA	NA	113121778	113126235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113121800_113126200
ES.29209.31	chr6	+	5503	2	NIC	ENSMUSG00000034269.13	novel	6527	22	NA	NA	18570	0	intron_retention	FALSE	canonical	3	38	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATCATAATGTTAACAA	3228	False	NA	12	True	NA	NA	NA	113124211	113130385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113127152_113127822
ES.29209.4	chr6	+	7427	23	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	3	-4	intron_retention	FALSE	canonical	3	18	junction_6	22.8068153508174	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTTAACAATGTGTTT	7846	False	NA	19	True	NA	NA	NA	113054328	113130392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113127152_113127822
ES.29209.5	chr6	+	6812	22	FSM	ENSMUSG00000034269.13	ENSMUST00000113157.8	6527	22	-270	-15	4	4	multi-exon	FALSE	canonical	3	23	junction_2	23.5546356727928	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGTGTTTGTTCGCTT	7847	False	NA	27	True	NA	NA	NA	113054329	113130400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113054674_113081895_113082083_113086845_113086952_113087277_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.6	chr6	+	4680	19	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	4	-2561	intron_retention	FALSE	canonical	0	0	junction_18	24.5495844927248	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACTATTTCAAGAACAC	7847	False	NA	NA	False	NA	NA	NA	113054329	113126235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113086845_113086952_113087334_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113125849
ES.29209.7	chr6	+	6738	22	FSM	ENSMUSG00000034269.13	ENSMUST00000042889.12	6755	22	6	11	6	0	multi-exon	FALSE	canonical	3	23	junction_2	22.3513482018403	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATCATAATGTTAACAA	7849	False	NA	12	True	NA	NA	NA	113054331	113130385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113054674_113081895_113082083_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.8	chr6	+	6544	21	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	27.7841681538246	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCATCATAATGTTAACA	7849	False	NA	11	True	NA	NA	NA	113054331	113130384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115156_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.29209.9	chr6	+	7008	24	NNC	ENSMUSG00000034269.13	novel	6755	22	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	23.2069672088392	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATAATGTTAACAATGTG	7849	False	NA	16	True	NA	NA	NA	113054331	113130389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113054674_113081895_113082083_113082877_113083103_113086845_113086952_113087334_113087487_113087590_113087632_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ES.2921.1	chr10	-	162	1	Intergenic	novelGene_2246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCTCATATAAATAAAA	1895	False	NA	NA	False	NA	NA	NA	61977257	61977095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_61977100_61977300
ES.29210.1	chr6	-	176	1	Intergenic	novelGene_24251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTCCTATTAGTAA	9667	False	NA	NA	False	NA	NA	NA	113066655	113066479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113066500_113066700
ES.29211.1	chr6	-	4481	17	Antisense	novelGene_ENSMUSG00000034269.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAAGCATGGTCACC	NA	False	NA	NA	False	NA	NA	NA	113124593	113086101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113087485_113087588_113087628_113087822_113087882_113088314_113088496_113091802_113092045_113092485_113092638_113092965_113093089_113093745_113093848_113094326_113094577_113095216_113095305_113096375_113096630_113097799_113098121_113098526_113098770_113105370_113105501_113114911_113115160_113120571_113121043_113124398
ES.29212.1	chr6	-	4718	4	FSM	ENSMUSG00000042873.12	ENSMUST00000162280.2	4762	4	47	-3	47	3	multi-exon	FALSE	canonical	1	2	junction_1	1.88561808316413	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGGCTGCTGCTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113172298	113145047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113148920_113153406_113153644_113170778_113171265_113172175
ES.29212.2	chr6	-	4635	5	NNC	ENSMUSG00000042873.12	novel	4762	4	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.17944947177034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGGCTGCTGCTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113172304	113145047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113146197_113146285_113148920_113153406_113153644_113170778_113171265_113172175
ES.29212.3	chr6	-	174	1	ISM	ENSMUSG00000042873.12	ENSMUST00000203665.2	1414	2	17827	548	17827	-548	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	113153077	113152903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_113152900_113153100
ES.29213.1	chr6	-	172	1	Intergenic	novelGene_24252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	9273	False	NA	NA	False	NA	NA	NA	113186110	113185938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113185900_113186100
ES.29214.1	chr6	+	190	1	Intergenic	novelGene_24253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGAGTTGACTGGCAA	NA	False	NA	NA	False	NA	NA	NA	113190136	113190326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113190100_113190300
ES.29215.1	chr6	+	211	1	Intergenic	novelGene_24254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAACTAAG	NA	False	NA	NA	False	NA	NA	NA	113198490	113198701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113198500_113198700
ES.29216.1	chr6	+	3481	17	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	-11	8951	-11	1647	5prime_fragment	TRUE	canonical	3	315	junction_14	23.8372574712361	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCTAAGGGATCCTGTC	1957	False	NA	NA	False	ATTAAA	-26	NA	113214792	113249402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482
ES.29216.10	chr6	+	2297	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	87.5394918294468	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCATTAGCATTTCAT	1986	False	NA	17	True	AATAAA	-18	NA	113214821	113258161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232805_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.11	chr6	+	2461	19	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	131.515302118643	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCATTAGCATTTCAT	1986	False	NA	17	True	AATAAA	-18	NA	113214821	113258161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113234299_113234451_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ES.29216.13	chr6	+	2150	17	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	11	7	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	120.502528500443	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTAGCATTTCATCCG	1987	False	NA	20	True	AATAAA	-21	NA	113214822	113258164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232805_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.14	chr6	+	2657	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	19	0	11	0	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCAGTCCCCATCAG	1987	False	NA	NA	False	NA	NA	NA	113214822	113258353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.17	chr6	+	2134	17	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	112.439410767533	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTTTCATTAGCATTT	1990	False	NA	14	True	AATAAA	-15	NA	113214825	113258158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232805_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ES.29216.18	chr6	+	1169	8	NNC	ENSMUSG00000030269.15	novel	2531	18	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	159.543865121662	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCTTTTCATTAGCAT	1990	False	NA	12	True	AATAAA	-13	NA	113214825	113258156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232883_113233983_113234076_113257837
ES.29216.19	chr6	+	5936	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	298	junction_16	28.6449449636811	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCTTTTCATTAGCAT	2002	False	NA	12	True	AATAAA	-13	NA	113214837	113258156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.20	chr6	+	9530	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-14	2	intron_retention	FALSE	canonical	3	315	junction_14	23.9399479378389	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCATTAGCATTTC	2008	False	NA	15	True	AATAAA	-16	NA	113214843	113258159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113254907_113257563
ES.29216.23	chr6	+	2872	19	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	86.9858261478115	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTCCCCATCAGTCA	2018	False	NA	NA	False	NA	NA	NA	113214853	113258356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257320
ES.29216.25	chr6	+	2020	17	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	85	10316	31	282	5prime_fragment	FALSE	canonical	3	315	junction_14	23.8372574712361	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCTGGGTTCATTTAT	2053	False	NA	NA	False	NA	NA	NA	113214888	113248037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482
ES.29216.27	chr6	+	3978	17	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	2552	966	924	-493	internal_fragment	FALSE	canonical	3	298	junction_16	28.5377354348589	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTGAGAGCTGAAAGTT	4520	False	NA	NA	False	AATAAA	-18	NA	113217355	113257387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750
ES.29216.28	chr6	+	180	1	Intergenic	novelGene_24255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTTTCCCCA	5798	False	NA	NA	False	NA	NA	NA	113218633	113218813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113218600_113218800
ES.29216.29	chr6	+	176	1	Intergenic	novelGene_24256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTTGTGAA	9303	False	NA	NA	False	NA	NA	NA	113222138	113222314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113222100_113222300
ES.29216.3	chr6	+	2511	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	-9	174	-9	22	multi-exon	FALSE	canonical	3	298	junction_17	28.028204489649	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGGTTGTGACCGTCGTT	1959	False	NA	35	True	AATAAA	-36	NA	113214794	113258179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.30	chr6	+	2054	17	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	12026	196	-4230	0	3prime_fragment	FALSE	canonical	3	298	junction_15	28.5175384631984	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	NA	False	NA	13	True	AATAAA	-14	NA	113226829	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.31	chr6	+	2634	16	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-1100	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	89.1650155610372	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	NA	False	NA	13	True	AATAAA	-14	NA	113229959	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
ES.29216.32	chr6	+	2073	15	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	131.420729579718	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	NA	False	NA	19	True	AATAAA	-20	NA	113232782	113258163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113232900_113233983_113234058_113236089_113236357_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.33	chr6	+	9032	1	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	2622	6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	NA	False	NA	19	True	AATAAA	-20	NA	113249131	113258163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113249100_113258200
ES.29216.4	chr6	+	2173	17	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	113.374224776842	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1970	False	NA	13	True	AATAAA	-14	NA	113214805	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ES.29216.5	chr6	+	2216	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	110.79608127681	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1981	False	NA	13	True	AATAAA	-14	NA	113214816	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232805_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ES.29216.6	chr6	+	2316	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	88.3270111554443	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGCTTTTCATTAGCA	1981	False	NA	11	True	AATAAA	-12	NA	113214816	113258155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29216.7	chr6	+	2426	19	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	81.7724183026387	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1981	False	NA	13	True	AATAAA	-14	NA	113214816	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
ES.29216.8	chr6	+	2312	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	6	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	76.4492277859348	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGCATTTCATCC	1986	False	NA	19	True	AATAAA	-20	NA	113214821	113258163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ES.29216.9	chr6	+	2455	19	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	87.1938382691046	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1986	False	NA	13	True	AATAAA	-14	NA	113214821	113258157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243010_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ES.29217.1	chr6	+	1852	16	NIC	ENSMUSG00000030270.12	novel	2777	21	NA	NA	1333	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	5.73643327047972	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTCTCATGGGTGT	NA	False	NA	3	True	AATAAA	-14	NA	113260658	113281787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113260944_113261345_113261423_113266945_113267010_113267127_113267232_113267365_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
ES.29217.2	chr6	+	2071	17	NNC	ENSMUSG00000030270.12	novel	2777	21	NA	NA	1346	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.45386269996504	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGTCTCATGGGTGTT	NA	False	NA	4	True	AATAAA	-15	NA	113260671	113281788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113260944_113261345_113261423_113265051_113265283_113266945_113267010_113267127_113267232_113267365_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
ES.29217.3	chr6	+	1692	14	NIC	ENSMUSG00000030270.12	novel	2777	21	NA	NA	2029	2	intron_retention	FALSE	canonical	0	0	junction_5	6.12106654279316	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTCTCATGGGTGT	NA	False	NA	3	True	AATAAA	-14	NA	113261354	113281787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113261423_113266945_113267010_113267127_113267471_113268998_113269041_113269326_113269403_113269482_113269537_113269963_113270026_113270669_113270717_113271572_113271755_113271986_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
ES.29217.4	chr6	+	877	5	ISM	ENSMUSG00000030270.12	ENSMUST00000134523.8	4143	13	6399	745	578	2	3prime_fragment	FALSE	canonical	3	13	junction_1	2.95803989154981	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTCTCATGGGTGT	3984	False	NA	3	True	AATAAA	-14	NA	113271863	113281787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113272115_113277523_113277627_113278600_113278659_113279009_113279084_113281396
ES.29218.1	chr6	+	4952	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113117.4	4540	13	-390	-22	-303	3	multi-exon	FALSE	canonical	3	53	junction_1	40.0779622181013	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGCCTTCTACTAGGA	1433	False	NA	31	True	AATAAA	-19	NA	113283794	113301824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.10	chr6	+	4795	14	NNC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.2191330717085	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	264	False	NA	13	True	AATAAA	-1	NA	113284129	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284163_113286347_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.11	chr6	+	4722	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113119.8	4826	13	-23	127	3	9	multi-exon	FALSE	canonical	3	30	junction_7	46.1317557533733	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	264	False	NA	-99	True	NA	NA	NA	113284129	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.12	chr6	+	4777	15	NNC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.196521107715	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	264	False	NA	-99	True	NA	NA	NA	113284129	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284531_113285694_113285837_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.14	chr6	+	4219	13	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	62.0207738494844	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	267	False	NA	5	True	AATATA	-12	NA	113284132	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.15	chr6	+	4631	13	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	6	2	intron_retention	FALSE	canonical	3	36	junction_6	50.9032306331228	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGCCTTCTACTAGG	267	False	NA	30	True	AATAAA	-18	NA	113284132	113301823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.16	chr6	+	4502	13	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	6	9	intron_retention	FALSE	canonical	3	36	junction_6	50.9032306331228	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	267	False	NA	-99	True	NA	NA	NA	113284132	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.17	chr6	+	4501	14	NNC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.9902782767324	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	267	False	NA	13	True	AATAAA	-1	NA	113284132	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294022_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297403_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.18	chr6	+	4400	14	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	6	9	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	49.1722007382605	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	267	False	NA	-99	True	NA	NA	NA	113284132	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.19	chr6	+	4574	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	58.949130612758	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	267	False	NA	13	True	AATAAA	-1	NA	113284132	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113300943
ES.29218.2	chr6	+	4607	14	NNC	ENSMUSG00000001632.17	novel	2747	2	NA	NA	-301	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.5035118079298	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	1435	False	NA	13	True	AATAAA	-1	NA	113283796	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284055_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.21	chr6	+	4609	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	40	124	11	9	multi-exon	FALSE	canonical	3	111	junction_6	28.9253272447006	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	272	False	NA	-99	True	NA	NA	NA	113284137	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.22	chr6	+	4800	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	-4	intron_retention	FALSE	canonical	3	53	junction_1	40.3535589783878	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	272	False	NA	5	True	AATATA	-12	NA	113284137	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.25	chr6	+	4352	14	NNC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.3014667237678	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	273	False	NA	5	True	AATATA	-12	NA	113284138	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284196_113284270_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.26	chr6	+	5089	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	12	1	intron_retention	FALSE	canonical	3	111	junction_5	30.064167486672	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTCTTGCCTTCTAC	273	False	NA	26	True	AATAAA	-14	NA	113284138	113301819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.27	chr6	+	4754	14	FSM	ENSMUSG00000001632.17	ENSMUST00000204626.3	4381	14	-135	-238	12	1	multi-exon	FALSE	canonical	3	36	junction_6	42.213040975537	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTGCCTTCTACTAG	273	False	NA	29	True	AATAAA	-17	NA	113284138	113301822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.28	chr6	+	4840	13	FSM	ENSMUSG00000001632.17	ENSMUST00000203577.2	4468	13	-251	-121	12	4	multi-exon	FALSE	canonical	3	36	junction_6	43.4117079701881	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	273	False	NA	13	True	AATAAA	-1	NA	113284138	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.29	chr6	+	6237	12	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	12	4	intron_retention	FALSE	canonical	3	111	junction_6	30.0981864311835	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	273	False	NA	13	True	AATAAA	-1	NA	113284138	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373
ES.29218.3	chr6	+	4961	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	-183	-5	-183	2	multi-exon	FALSE	canonical	3	111	junction_6	28.9253272447006	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGCCTTCTACTAGG	49	False	NA	30	True	AATAAA	-18	NA	113283914	113301823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.30	chr6	+	4964	12	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	12	4	intron_retention	FALSE	canonical	3	36	junction_5	53.1529836361186	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	273	False	NA	13	True	AATAAA	-1	NA	113284138	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.31	chr6	+	5131	12	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	111	junction_6	29.1468212689248	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	275	False	NA	5	True	AATATA	-12	NA	113284140	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.32	chr6	+	4380	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	-12	15	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	39.0967545074748	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCTACTTCCTTT	275	False	NA	-93	True	NA	NA	NA	113284140	113301700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.33	chr6	+	7092	10	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	-10	4	intron_retention	FALSE	canonical	3	53	junction_1	43.4920171474669	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	277	False	NA	13	True	AATAAA	-1	NA	113284142	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373
ES.29218.36	chr6	+	4309	12	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	-1	2	intron_retention	FALSE	canonical	1	2	junction_8	58.1850851355518	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGCCTTCTACTAGG	286	False	NA	30	True	AATAAA	-18	NA	113284151	113301823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.37	chr6	+	3148	12	NNC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.4955852096834	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTCTTGCCTTCTAC	286	False	NA	26	True	AATAAA	-14	NA	113284151	113301819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284531_113293488_113293652_113294020_113294153_113294514_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.38	chr6	+	3227	11	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_1	57.3703756306336	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	287	False	NA	13	True	AATAAA	-1	NA	113284152	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.4	chr6	+	4867	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	13	2	intron_retention	FALSE	canonical	3	111	junction_6	28.8800200061488	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGCCTTCTACTAGG	245	False	NA	30	True	AATAAA	-18	NA	113284110	113301823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.40	chr6	+	4614	14	FSM	ENSMUSG00000001632.17	ENSMUST00000204626.3	4381	14	-116	-117	5	16	multi-exon	FALSE	canonical	3	36	junction_6	42.213040975537	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTACTTCCTTTC	292	False	NA	-92	True	NA	NA	NA	113284157	113301701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.41	chr6	+	2984	11	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57.1804162279359	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	295	False	NA	28	True	AATAAA	-16	NA	113284160	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.42	chr6	+	4304	13	FSM	ENSMUSG00000001632.17	ENSMUST00000204198.3	4307	13	34	-31	8	9	multi-exon	FALSE	canonical	1	2	junction_8	59.0594686170925	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	295	False	NA	-99	True	NA	NA	NA	113284160	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.45	chr6	+	4497	14	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	49.1722007382605	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	297	False	NA	28	True	AATAAA	-16	NA	113284162	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.46	chr6	+	4405	13	FSM	ENSMUSG00000001632.17	ENSMUST00000204198.3	4307	13	37	-135	11	-4	multi-exon	FALSE	canonical	1	2	junction_8	59.0594686170925	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	298	False	NA	5	True	AATATA	-12	NA	113284163	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.5	chr6	+	4756	13	FSM	ENSMUSG00000001632.17	ENSMUST00000203577.2	4468	13	-279	-9	13	9	multi-exon	FALSE	canonical	3	36	junction_6	43.4117079701881	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGCTTGTCTCTACT	245	False	NA	-99	True	NA	NA	NA	113284110	113301694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.50	chr6	+	5739	11	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	4	intron_retention	FALSE	canonical	3	111	junction_4	31.9763975456899	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	298	False	NA	13	True	AATAAA	-1	NA	113284163	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113294638_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.52	chr6	+	4446	13	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	64.6786930397742	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	298	False	NA	28	True	AATAAA	-16	NA	113284163	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.53	chr6	+	3147	12	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	11	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.1714183723427	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	298	False	NA	13	True	AATAAA	-1	NA	113284163	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.54	chr6	+	6141	4	NIC	ENSMUSG00000001632.17	novel	4540	13	NA	NA	11	-1244	intron_retention	FALSE	canonical	1	2	junction_3	62.2735899077611	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCGGGCATGGTGGCAC	298	False	NA	NA	False	TTTAAA	-43	NA	113284163	113298023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113296323_113297394
ES.29218.55	chr6	+	4921	12	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	11	1	intron_retention	FALSE	canonical	3	30	junction_6	55.3057616594083	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTATTTAGAATTCTT	298	False	NA	10	True	AATATA	-17	NA	113284163	113301803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.56	chr6	+	5472	11	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	11	4	intron_retention	FALSE	canonical	3	111	junction_5	30.3922687537472	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	298	False	NA	13	True	AATAAA	-1	NA	113284163	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294638_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.57	chr6	+	4178	13	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	11	4	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	55.735735594161	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	298	False	NA	13	True	AATAAA	-1	NA	113284163	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.62	chr6	+	3228	11	NNC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	72.868717567966	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	310	False	NA	28	True	AATAAA	-16	NA	113284175	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284531_113293488_113293652_113294020_113294153_113294514_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.63	chr6	+	5151	12	NIC	ENSMUSG00000001632.17	novel	4468	13	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	36	junction_5	45.3398553078728	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	310	False	NA	5	True	AATATA	-12	NA	113284175	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.65	chr6	+	4303	13	NIC	ENSMUSG00000001632.17	novel	4381	14	NA	NA	-7	10	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	57.8414979827536	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGCTTGTCTCTACTT	312	False	NA	-98	True	NA	NA	NA	113284177	113301695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.66	chr6	+	4400	13	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	30	junction_7	52.9865680044376	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAGAAAAA	322	False	NA	NA	False	NA	NA	NA	113284187	113301662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.67	chr6	+	5716	11	NIC	ENSMUSG00000001632.17	novel	4468	13	NA	NA	-41	1	intron_retention	FALSE	canonical	3	116	junction_1	26.7477101823689	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTCTTGCCTTCTAC	483	False	NA	26	True	AATAAA	-14	NA	113284348	113301819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.68	chr6	+	4439	12	ISM	ENSMUSG00000001632.17	ENSMUST00000203577.2	4468	13	2373	-111	2373	-6	3prime_fragment	FALSE	canonical	3	36	junction_5	43.698251567799	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATAAAGTCTATTTAG	2897	False	NA	3	True	AATATA	-10	NA	113286762	113301796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.69	chr6	+	4103	12	NNC	ENSMUSG00000001632.17	novel	4468	13	NA	NA	2607	0	intron_retention	FALSE	canonical	0	0	junction_11	62.756514923068	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	3131	False	NA	28	True	AATAAA	-16	NA	113286996	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299402_113300943
ES.29218.7	chr6	+	4390	14	NNC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	-5	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.5826619481277	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCTTGTCTCTACTTCC	256	False	NA	-96	True	NA	NA	NA	113284121	113301697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294514_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.71	chr6	+	5607	11	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	-4123	-4	intron_retention	FALSE	canonical	3	36	junction_4	46.1182176585349	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	6130	False	NA	5	True	AATATA	-12	NA	113289995	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.72	chr6	+	4812	12	ISM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	6364	12	-3657	4	3prime_fragment	FALSE	canonical	3	111	junction_4	28.3359421907003	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTAGAATTCTTTCT	6596	False	NA	13	True	AATAAA	-1	NA	113290461	113301806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.73	chr6	+	3358	9	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	-1992	2	intron_retention	FALSE	canonical	1	2	junction_5	77.7840560462104	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTGCCTTCTACTAGG	8261	False	NA	30	True	AATAAA	-18	NA	113292126	113301823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113292512_113293488_113293652_113294020_113294656_113295372_113295683_113295998_113296323_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ES.29218.75	chr6	+	2595	10	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	-99	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	52.1410717000014	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	NA	False	NA	5	True	AATATA	-12	NA	113294019	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.76	chr6	+	2332	8	ISM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	11273	20	1252	-4	3prime_fragment	FALSE	canonical	3	130	junction_5	27.4627762914213	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGTCTATTTAGAA	NA	False	NA	5	True	AATATA	-12	NA	113295370	113301798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29218.77	chr6	+	2556	1	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	1488	-1105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113295606	113298162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113295600_113298200
ES.29218.8	chr6	+	4512	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	39.0967545074748	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	264	False	NA	28	True	AATAAA	-16	NA	113284129	113301821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ES.29219.1	chr6	+	1653	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	-52	0	-25	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2283	False	NA	10	True	AATAAA	-19	NA	113303907	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.10	chr6	+	2227	7	NNC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-4	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	90.2108640907513	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGAGGCAGCACTTTC	2317	False	NA	NA	False	NA	NA	NA	113303941	113311823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310789
ES.29219.11	chr6	+	1076	1	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	4	-759	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCCGGGCAGTGGTGGC	2325	False	NA	NA	False	NA	NA	NA	113303949	113305025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113303900_113305000
ES.29219.12	chr6	+	2135	6	NIC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	238	junction_4	8.77724330299668	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2334	False	NA	10	True	AATAAA	-19	NA	113303958	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.13	chr6	+	859	3	NNC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	3	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCCCCCTGGAGCCTC	2338	False	NA	NA	False	NA	NA	NA	113303962	113306102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113304324_113305325_113305574_113305852
ES.29219.14	chr6	+	5183	4	NIC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	3	1869	intron_retention	FALSE	canonical	3	243	junction_1	6.34209919681348	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATTAATGCTGTTTAA	2338	False	NA	NA	False	NA	NA	NA	113303962	113313898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310302
ES.29219.15	chr6	+	1698	8	NNC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.011760050446	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2339	False	NA	10	True	AATAAA	-19	NA	113303963	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113304324_113304622_113304724_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.16	chr6	+	1441	6	ISM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	265	4	126	0	intron_retention	FALSE	canonical	3	196	junction_2	21.2471174515509	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2573	False	NA	10	True	AATAAA	-19	NA	113304197	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591
ES.29219.2	chr6	+	1980	8	NNC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-19	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.220372945499	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCAGCACTTTCATGT	2289	False	NA	NA	False	NA	NA	NA	113303913	113311827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113303957_113304622_113304724_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.3	chr6	+	2029	5	NIC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	21	junction_3	101.122141492356	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2289	False	NA	10	True	AATAAA	-19	NA	113303913	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310591_113310642_113310802
ES.29219.4	chr6	+	1561	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	-15	3	-15	1	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCAGTGAAGAGTGAGA	2293	False	NA	11	True	AATAAA	-20	NA	113303917	113311146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.5	chr6	+	2337	5	NIC	ENSMUSG00000030271.15	novel	1601	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	238	junction_4	7.36545993132812	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2293	False	NA	10	True	AATAAA	-19	NA	113303917	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113304324_113305325_113306370_113308731_113308914_113310302_113310454_113310591
ES.29219.6	chr6	+	1405	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2297	False	NA	10	True	AATAAA	-19	NA	113303921	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
ES.29219.7	chr6	+	4386	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	-28	-2757	-1	1873	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGCTGTTTAAGCCT	2307	False	NA	NA	False	NA	NA	NA	113303931	113313902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.29219.9	chr6	+	1639	8	NNC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.464420951042	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2315	False	NA	10	True	AATAAA	-19	NA	113303939	113311145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113304324_113304622_113304724_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ES.2922.1	chr10	-	3653	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-14	-1	-14	1	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGGTGTTTTATCAT	4862	False	NA	NA	False	NA	NA	NA	62067044	62021173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ES.2922.10	chr10	-	3163	3	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	-1515	-581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	128.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGACCAACCAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	62039071	62034568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62035798_62035910_62037632_62038858
ES.2922.2	chr10	-	175	1	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	45201	480	2855	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAAAACCCAACAGAATG	NA	False	NA	NA	False	NA	NA	NA	62021829	62021654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62021700_62021800
ES.2922.3	chr10	-	2879	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	1	758	1	-758	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCGGTCTCGGGGGTCA	4877	False	NA	NA	False	AATAAA	-15	NA	62067029	62021932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ES.2922.4	chr10	-	2097	8	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	12366	354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.9092393319753	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	NA	False	NA	0	True	AATAAA	-27	NA	62054664	62023133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62054014
ES.2922.5	chr10	-	1722	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	-44	1960	-44	353	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGTTTGGAAGTC	4832	False	NA	-1	True	AATAAA	-26	NA	62067074	62023134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ES.2922.6	chr10	-	3477	8	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	29	353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.441321601695	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGTTTGGAAGTC	4905	False	NA	-1	True	AATAAA	-26	NA	62067001	62023134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62027817_62029742_62037556_62037632_62038858_62039045_62066798
ES.2922.7	chr10	-	1280	6	NIC	ENSMUSG00000037031.11	novel	757	6	NA	NA	38	353	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	101.637394693095	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGTTTGGAAGTC	NA	False	NA	-1	True	AATAAA	-26	NA	62029946	62023134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62029851
ES.2922.8	chr10	-	2697	8	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	-35	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.024043626734	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTTGTTTGGAAGT	4841	False	NA	-2	True	AATAAA	-25	NA	62067065	62023135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62023942_62024421_62025494_62025558_62025637_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ES.2922.9	chr10	-	1752	9	NNC	ENSMUSG00000037031.11	novel	3638	8	NA	NA	29	347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	111.522139057678	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATTTGTGTTGTTTG	4905	False	NA	-7	True	AATAAA	-20	NA	62067001	62023140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62027817_62027927_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ES.29220.1	chr6	-	4388	1	Antisense	novelGene_ENSMUSG00000030269.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCTGTCTCAAAGTAAA	5820	False	NA	NA	False	NA	NA	NA	113232718	113228330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113228300_113232700
ES.29221.1	chr6	-	1182	1	Antisense	novelGene_ENSMUSG00000030269.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	3875	False	NA	NA	False	NA	NA	NA	113234663	113233481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113233500_113234700
ES.29222.1	chr6	-	167	1	NIC	ENSMUSG00000090194.2	novel	290	2	NA	NA	33	-894	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	113253858	113253691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113253700_113253900
ES.29222.2	chr6	-	175	2	Intergenic	novelGene_24257	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	113309970	113253691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113253705_113309808
ES.29222.3	chr6	-	2114	1	FSM	ENSMUSG00000107812.2	ENSMUST00000203569.2	1050	1	-1099	35	-1099	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAACCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	113284734	113282620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113282600_113284700
ES.29222.4	chr6	-	182	1	Intergenic	novelGene_24258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATTAAAACAAGACTACTG	NA	False	NA	NA	False	NA	NA	NA	113309972	113309790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113309800_113310000
ES.29222.5	chr6	-	173	2	Intergenic	novelGene_24259	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAATTAAAACAAGACTA	NA	False	NA	NA	False	NA	NA	NA	113328057	113309793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113309921_113328011
ES.29222.6	chr6	-	1456	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	29	11	8	2	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGACAGTTCCGTTT	5822	False	NA	NA	False	AATAAA	-9	NA	113320916	113311095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ES.29223.1	chr6	+	3141	8	NNC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	-3501	7	intron_retention	FALSE	canonical	0	0	junction_1	557.785782887872	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTGTGGGTGTGTGA	NA	False	NA	45	True	ATTAAA	-37	NA	113351574	113366620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113353018_113354198_113354305_113354964_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.10	chr6	+	3205	2	NIC	ENSMUSG00000079426.14	novel	794	6	NA	NA	-8	-6508	intron_retention	FALSE	canonical	3	1427	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAGAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113355145	113359468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113357806_113358923
ES.29223.11	chr6	+	1167	4	FSM	ENSMUSG00000030276.20_ENSMUSG00000079426.14	ENSMUST00000171058.8	695	4	-5	-467	-5	-3	multi-exon	FALSE	canonical	0	0	junction_1	553.404212327863	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTCTGTGCTCTGTGT	NA	False	NA	35	True	ATTAAA	-27	NA	113355148	113366610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113355170_113361042_113361139_113362450_113362622_113365731
ES.29223.12	chr6	+	1768	2	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	79	7970	1	-6537	intron_retention	FALSE	canonical	3	688	junction_1	0	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113355154	113359439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113355170_113357686
ES.29223.14	chr6	+	3897	5	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	96	794	18	2	3prime_fragment	FALSE	canonical	3	1123	junction_4	109.922700112397	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGCTCTGTGTGGGTG	NA	False	NA	40	True	ATTAAA	-32	NA	113355171	113366615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.15	chr6	+	1445	6	NNC	ENSMUSG00000030276.20	novel	1472	6	NA	NA	-10895	-9216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	512.714969549359	446	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGCTCTGTGTGGGTG	NA	False	NA	40	True	ATTAAA	-32	NA	113355325	113366615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113355389_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.16	chr6	+	4491	4	ISM	ENSMUSG00000030276.20_ENSMUSG00000079426.14	ENSMUST00000204802.2	794	6	2155	-637	2155	0	intron_retention	FALSE	canonical	3	1219	junction_3	89.5023277164715	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113357685	113366613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450
ES.29223.17	chr6	+	1057	2	ISM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	7341	-2	6918	2	3prime_fragment	FALSE	canonical	3	1123	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGCTCTGTGTGGGTG	NA	False	NA	40	True	ATTAAA	-32	NA	113362448	113366615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113362622_113365731
ES.29223.18	chr6	+	4369	12	Fusion	ENSMUSG00000030276.20_ENSMUSG00000079426.14	novel	2745	13	NA	NA	-3772	0	intron_retention	FALSE	canonical	1	1	junction_2	318.493353979209	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTTCTCTGGGCTTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	113362448	113391548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_113362622_113365731_113366504_113370063_113370156_113371655_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.19	chr6	+	3746	13	NNC	ENSMUSG00000030276.20	novel	3168	13	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_12	8.91939210683977	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAAAGTTCTCTGGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	113369431	113391544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749_113390021_113390823_113391051_113391237
ES.29223.2	chr6	+	1991	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	-520	799	-520	-3	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTCTGTGCTCTGTGT	NA	False	NA	35	True	ATTAAA	-27	NA	113354555	113366610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.20	chr6	+	3743	12	ISM	ENSMUSG00000030276.20	ENSMUST00000032414.11	3168	13	233	-5	194	5	intron_retention	FALSE	canonical	2	2	junction_1	6.38308715692435	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTGGGCTTGGCTTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	113369651	113391553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.21	chr6	+	3658	12	NNC	ENSMUSG00000030276.20	novel	3114	13	NA	NA	238	0	intron_retention	FALSE	canonical	0	0	junction_6	8.26223110363765	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113369695	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376645_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.22	chr6	+	2321	10	NIC	ENSMUSG00000030276.20	novel	3168	13	NA	NA	260	-6	intron_retention	FALSE	canonical	1	1	junction_6	8.77426089884428	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACATTGTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	113369717	113386854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113378262_113378459_113382259_113382409_113384136_113384381_113385865
ES.29223.23	chr6	+	3629	12	NIC	ENSMUSG00000030276.20	novel	3114	13	NA	NA	264	0	intron_retention	FALSE	canonical	1	2	junction_1	7.90229593167299	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113369721	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113369858_113370063_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749_113390021_113390823
ES.29223.24	chr6	+	2413	11	NNC	ENSMUSG00000030276.20	novel	3168	13	NA	NA	-129	-1158	intron_retention	FALSE	non_canonical	0	0	junction_1	7.18957578720748	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTATTCCAAAGTAGTC	NA	False	NA	NA	False	AATATA	-8	NA	113369991	113390361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113370152_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.25	chr6	+	1712	9	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-125	6817	-125	-2133	5prime_fragment	FALSE	canonical	3	13	junction_6	4.1514304763539	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCCTGACTATAATTTC	NA	False	NA	NA	False	NA	NA	NA	113369995	113384727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136
ES.29223.26	chr6	+	3607	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-124	-12	-124	8	intron_retention	FALSE	canonical	3	13	junction_6	3.96106046406767	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGCTTGGCTTGGATA	NA	False	NA	NA	False	ATTAAA	-24	NA	113369996	113391556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.27	chr6	+	3631	12	NIC	ENSMUSG00000030276.20	novel	2745	13	NA	NA	-118	0	intron_retention	FALSE	canonical	1	1	junction_10	8.07915387108868	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113370002	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749_113390021_113390582_113390660_113390823
ES.29223.28	chr6	+	4395	10	NIC	ENSMUSG00000030276.20	novel	2745	13	NA	NA	-113	25	intron_retention	FALSE	canonical	3	13	junction_5	3.80383172636082	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGAGGCAAGGCTCTA	NA	False	NA	NA	False	ATTAAA	-41	NA	113370007	113391573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.29	chr6	+	3335	10	NIC	ENSMUSG00000030276.20	novel	3114	13	NA	NA	-112	0	intron_retention	FALSE	canonical	2	2	junction_5	8.04769731654748	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113370008	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376665_113376733_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.3	chr6	+	4600	5	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	-15	795	-15	1	intron_retention	FALSE	canonical	3	688	junction_1	277.353902983174	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	False	NA	39	True	ATTAAA	-31	NA	113355060	113366614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450
ES.29223.30	chr6	+	2321	10	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-91	4689	-91	-5	5prime_fragment	FALSE	canonical	3	13	junction_6	4.17517649512354	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTGTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	113370029	113386855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865
ES.29223.31	chr6	+	1088	7	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	1557	8984	1540	-4300	internal_fragment	FALSE	canonical	3	13	junction_5	4.71404520791032	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCTCAGTTGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	113371677	113382560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259
ES.29223.32	chr6	+	3129	9	NNC	ENSMUSG00000030276.20	novel	3168	13	NA	NA	1540	918	intron_retention	FALSE	canonical	2	2	junction_6	7.44563630591772	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGTTTCTGTTAAGGA	NA	False	NA	NA	False	NA	NA	NA	113371677	113387778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382223_113382409_113384136_113384381_113385865
ES.29223.33	chr6	+	3183	9	NNC	ENSMUSG00000030276.20	novel	2517	9	NA	NA	-1811	0	intron_retention	FALSE	canonical	0	0	junction_1	7.34421541078419	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	113372907	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113372936_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.34	chr6	+	3721	6	ISM	ENSMUSG00000030276.20	ENSMUST00000203925.2	2517	9	1010	2748	1010	1915	internal_fragment	FALSE	canonical	3	13	junction_2	4	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTTTGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	113375728	113388775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865
ES.29223.35	chr6	+	4190	5	NNC	ENSMUSG00000030276.20	novel	2745	13	NA	NA	2467	0	intron_retention	FALSE	canonical	0	0	junction_2	9.14808723176599	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAAAGTTCTCTGGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	113377185	113391544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113378459_113382259_113382702_113384136_113384381_113385865_113386302_113389749
ES.29223.36	chr6	+	1516	2	NNC	ENSMUSG00000030276.20	novel	3114	13	NA	NA	-4459	0	intron_retention	FALSE	canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAAGT	977	False	NA	NA	False	NA	NA	NA	113381707	113391530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113381781_113390087
ES.29223.37	chr6	+	2997	4	ISM	ENSMUSG00000030276.20	ENSMUST00000203925.2	2517	9	7172	-25	-4276	0	intron_retention	FALSE	canonical	3	20	junction_3	1.69967317119759	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTTCTCTGGGCTTGG	1160	False	NA	NA	False	ATTAAA	-16	NA	113381890	113391548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113382409_113384136_113384381_113385865_113386302_113389749
ES.29223.4	chr6	+	930	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	2	1338	2	-72	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAAAAACCAAC	NA	False	NA	40	True	NA	NA	NA	113355077	113366071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.5	chr6	+	754	3	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	4	7941	4	-6508	5prime_fragment	FALSE	canonical	3	688	junction_1	369.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAGAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113355079	113359468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113355170_113357686_113357806_113358923
ES.29223.6	chr6	+	1443	6	NNC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	512.673541349659	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113355100	113366613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361133_113362450_113362622_113365731
ES.29223.7	chr6	+	1404	7	NNC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	482.850103264173	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGCTCTGTGTGGGTG	NA	False	NA	40	True	ATTAAA	-32	NA	113355104	113366615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731_113366255_113366297
ES.29223.8	chr6	+	1317	5	FSM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	2	4	2	-4	multi-exon	FALSE	canonical	3	8	junction_1	519.345922772096	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGTCTGTGCTCTGTG	NA	False	NA	34	True	ATTAAA	-26	NA	113355109	113366609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113355170_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ES.29223.9	chr6	+	4342	1	NIC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	-20	-6501	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	113355133	113359475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113355100_113359500
ES.29224.1	chr6	-	2338	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-7	-31	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAGTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	113354485	113343016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
ES.29224.10	chr6	-	1835	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-91	12	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	-8	True	TATAAA	-5	NA	113354569	113343603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
ES.29224.12	chr6	-	2641	9	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	13	12	intron_retention	FALSE	canonical	3	198	junction_8	66.8663545813588	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	-8	True	TATAAA	-5	NA	113354831	113343603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852
ES.29224.13	chr6	-	4083	8	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-10	12	combination_of_known_junctions	FALSE	canonical	3	134	junction_7	103.248264303245	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	-8	True	TATAAA	-5	NA	113354347	113343603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.14	chr6	-	2071	10	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	43	12	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	127.263506159464	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	-8	True	TATAAA	-5	NA	113354801	113343603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276_113354335_113354450
ES.29224.15	chr6	-	1578	8	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-41	12	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	135.189662688976	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCGCAAGTTTAGTATC	NA	False	NA	-8	True	TATAAA	-5	NA	113354378	113343603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ES.29224.16	chr6	-	1786	11	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-6	-10	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	136.483552122591	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAAGTTATAAAAA	NA	False	NA	8	True	AATAAA	-26	NA	113354484	113343625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276_113354335_113354450
ES.29224.17	chr6	-	4230	7	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-94	-12	intron_retention	FALSE	canonical	3	225	junction_6	62.8845944744993	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354572	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113352221_113352800_113353026_113354276
ES.29224.18	chr6	-	4012	8	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	4	-12	combination_of_known_splicesites	FALSE	canonical	3	29	junction_7	133.272775363392	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354474	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113352221_113352800_113353026_113353852_113353907_113354450
ES.29224.19	chr6	-	4392	9	NNC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	44	-12	intron_retention	FALSE	canonical	0	0	junction_8	135.143211076251	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354800	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354272
ES.29224.2	chr6	-	2386	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	431	31	65	-31	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAGTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	113354413	113343016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ES.29224.20	chr6	-	2350	9	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	34	-12	intron_retention	FALSE	canonical	3	134	junction_8	102.009114176136	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354810	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.22	chr6	-	1957	10	NNC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	3	-12	intron_retention	FALSE	canonical	0	0	junction_2	142.298156812022	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354475	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347435_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.23	chr6	-	5167	8	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-13	-12	intron_retention	FALSE	canonical	3	134	junction_7	101.731740075433	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354350	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113349343_113349425_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.24	chr6	-	1698	9	NNC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.214935792386	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354483	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353038_113354435
ES.29224.25	chr6	-	1819	10	NNC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-39	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.95912199065	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	False	NA	6	True	AATAAA	-24	NA	113354756	113343627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354629
ES.29224.26	chr6	-	581	2	NNC	ENSMUSG00000048930.13	novel	655	3	NA	NA	2905	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAACAAAAAAAAGTTATA	NA	False	NA	4	True	AATAAA	-22	NA	113345198	113343629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113345129
ES.29224.27	chr6	-	3877	9	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	8	-19	combination_of_known_splicesites	FALSE	canonical	3	29	junction_8	126.753636535604	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTTTAAACAAAAAAAAG	NA	False	NA	-1	True	AATAAA	-17	NA	113354470	113343634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
ES.29224.3	chr6	-	2276	9	NNC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-252	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	131.214935792386	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGCTGTGTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	113355096	113343039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113355046
ES.29224.30	chr6	-	1815	9	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-3	-44	intron_retention	FALSE	canonical	3	29	junction_8	130.268952555857	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAAGTGACTGCTGT	NA	False	NA	-26	True	NA	NA	NA	113354481	113343659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113352221_113352800_113353026_113353852_113353907_113354450
ES.29224.4	chr6	-	2317	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	14	-64	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATAAAGTGACTGCTG	NA	False	NA	NA	False	NA	NA	NA	113354323	113343049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.5	chr6	-	3963	9	NNC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	-53	22	intron_retention	FALSE	canonical	0	0	junction_5	144.676362962303	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTATCTATCTATTAT	NA	False	NA	2	True	TATAAA	-15	NA	113354531	113343593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349757_113350070_113352221_113352800_113353026_113353852_113353907_113354276
ES.29224.6	chr6	-	3925	8	NIC	ENSMUSG00000048930.13	novel	2848	9	NA	NA	-20	22	combination_of_known_junctions	FALSE	canonical	3	225	junction_7	58.553307301282	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGTATCTATCTATTAT	NA	False	NA	2	True	TATAAA	-15	NA	113354357	113343593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113351846_113351969_113352221_113352800_113353026_113354276
ES.29224.9	chr6	-	2262	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	29	19	intron_retention	FALSE	canonical	3	134	junction_9	97.0713114476818	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTAGTATCTATCTAT	NA	False	NA	-1	True	TATAAA	-12	NA	113354815	113343596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ES.29225.1	chr6	-	171	1	Intergenic	novelGene_24260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	113362208	113362037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113362000_113362200
ES.29226.1	chr6	-	2674	10	NNC	ENSMUSG00000051169.15	novel	1045	8	NA	NA	-2	18204	intron_retention	FALSE	canonical	0	0	junction_1	72.629960148076	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	113396282	113374075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113375805_113376289_113376389_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.10	chr6	-	2068	7	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	151	junction_2	17.6414914965323	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGAAAGCAGATGTTT	NA	False	NA	-21	True	AATAAA	-29	NA	113396295	113392292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113395911_113396178
ES.29226.11	chr6	-	1222	9	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	58.2880776831763	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGAAAGCAGATGTTT	NA	False	NA	-21	True	AATAAA	-29	NA	113396294	113392292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395884_113396178
ES.29226.12	chr6	-	1401	7	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	151	junction_2	17.0652343148936	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAGAAAGCAGATGT	NA	False	NA	-23	True	AATAAA	-27	NA	113396286	113392294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113395037_113395770_113395911_113396178
ES.29226.13	chr6	-	1063	8	FSM	ENSMUSG00000051169.15	ENSMUST00000129047.8	1045	8	-15	-3	-3	3	multi-exon	FALSE	canonical	3	151	junction_1	16.8607744272235	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGAGCGTTTGTGCATC	NA	False	NA	NA	False	NA	NA	NA	113396295	113393063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.2	chr6	-	1923	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	6	-660	-3	660	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGGGGATTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	113396295	113391619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.3	chr6	-	1277	9	NNC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	56.3347971949842	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTACCAAGGACTGT	NA	False	NA	-9	True	AATAAA	-41	NA	113396288	113392280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113392684_113393267_113393408_113393749_113393896_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.4	chr6	-	1210	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	61.8015256399757	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTACCAAGGACTGT	NA	False	NA	-9	True	AATAAA	-41	NA	113396288	113392280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113395770_113395911_113396178
ES.29226.5	chr6	-	1266	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	-35	-7	-14	-3	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGTTTACCAAGGACT	NA	False	NA	-11	True	AATAAA	-39	NA	113396315	113392282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.6	chr6	-	1292	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	-28	5	-28	5	multi-exon	FALSE	canonical	3	151	junction_2	15.858258889298	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGATGTTTACCAAGGA	NA	False	NA	-13	True	AATAAA	-37	NA	113396329	113392284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.7	chr6	-	1335	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	-3	4	intron_retention	FALSE	canonical	3	151	junction_2	16.318263212907	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGATGTTTACCAAGG	NA	False	NA	-14	True	AATAAA	-36	NA	113396295	113392285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ES.29226.8	chr6	-	2993	3	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	166	junction_1	14	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCAGATGTTTACCAA	NA	False	NA	-16	True	AATAAA	-34	NA	113396299	113392287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113392684_113393267_113394373_113394807
ES.29227.1	chr6	+	5573	2	NNC	ENSMUSG00000051256.11	novel	1201	2	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAGTTAAGACTG	NA	False	NA	6	True	AATAAA	-10	NA	113419534	113425163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113423190_113423245
ES.29227.2	chr6	+	1197	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	7	-3	7	3	multi-exon	FALSE	canonical	3	705	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGGAGATTTGATTGT	NA	False	NA	36	True	AATAAA	-40	NA	113419536	113425193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113419759_113424218
ES.29227.3	chr6	+	1048	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	22	131	-4	-111	multi-exon	FALSE	canonical	3	705	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGACTTCAGTCTGTG	NA	False	NA	-98	True	AATAAA	-11	NA	113419551	113425059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113419759_113424218
ES.29227.4	chr6	+	1152	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	-12	7	3	-7	multi-exon	FALSE	canonical	3	96	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAGTTAAGACTG	NA	False	NA	6	True	AATAAA	-10	NA	113419558	113425163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113419766_113424218
ES.29227.7	chr6	+	1558	2	NNC	ENSMUSG00000051256.11	novel	1147	2	NA	NA	29	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGAACCTCAATA	NA	False	NA	-10	True	NA	NA	NA	113419599	113425147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113419766_113423755
ES.29227.8	chr6	+	4112	1	FSM	ENSMUSG00000051256.11	ENSMUST00000204287.2	2414	1	1496	-3194	1481	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAGTTAAGACTG	NA	False	NA	6	True	AATAAA	-10	NA	113421051	113425163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113421100_113425200
ES.29228.1	chr6	-	162	1	Intergenic	novelGene_24261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAAAAAGAAACC	9168	False	NA	NA	False	NA	NA	NA	113426588	113426426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113426400_113426600
ES.29229.1	chr6	+	6775	14	NNC	ENSMUSG00000043088.17	novel	2940	15	NA	NA	-1798	-1	intron_retention	FALSE	canonical	0	0	junction_1	1.30995279737895	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAACAGTGTGCTGCTC	NA	False	NA	NA	False	AATAAA	-21	NA	113433646	113447716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113435126_113435812_113435988_113436320_113439338_113439554_113439715_113439788_113439929_113440913_113440983_113441721_113441789_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445866_113445919_113445990_113446090_113446517
ES.29229.2	chr6	+	2730	13	NNC	ENSMUSG00000043088.17	novel	2940	15	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1.34370962471642	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGTGTGCTGCTCTTG	834	False	NA	NA	False	AATAAA	-24	NA	113435733	113447719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113436002_113439239_113439338_113439554_113439715_113439788_113439929_113440913_113440983_113441721_113441789_113442675_113442852_113442940_113443116_113443213_113443369_113445397_113445467_113445866_113445919_113445990_113446090_113446517
ES.29229.3	chr6	+	2621	14	NNC	ENSMUSG00000043088.17	novel	1898	14	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.30995279737895	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGAACAGTGTGCTGCT	858	False	NA	NA	False	AATAAA	-20	NA	113435757	113447715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113436002_113439239_113439338_113439554_113439715_113439788_113439929_113440913_113440983_113441721_113441789_113442675_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445866_113445919_113445990_113446090_113446517
ES.2923.1	chr10	+	174	1	Intergenic	novelGene_2247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATCATGTC	173	False	NA	NA	False	NA	NA	NA	62072395	62072569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62072400_62072600
ES.29230.1	chr6	+	2343	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	10.3632969597244	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	5758	False	NA	4	True	AATAAA	-19	NA	113448389	113460099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.2	chr6	+	2301	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	5827	False	NA	4	True	AATAAA	-19	NA	113448458	113460099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.3	chr6	+	2303	17	NNC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.1854164885735	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCACTCGTGTATCTG	5827	False	NA	8	True	AATAAA	-23	NA	113448458	113460103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113448749_113449171_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.4	chr6	+	4696	14	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	-2	intron_retention	FALSE	canonical	3	26	junction_5	8.34677417049572	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	5827	False	NA	4	True	AATAAA	-19	NA	113448458	113460099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243
ES.29230.5	chr6	+	3648	17	NNC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	94	-3	intron_retention	FALSE	canonical	0	0	junction_11	14.9744574192189	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTAGCACTCGTGT	5850	False	NA	3	True	AATAAA	-18	NA	113448481	113460098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113456946_113457091_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.6	chr6	+	2219	17	NNC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	105	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.9014387744578	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	5861	False	NA	4	True	AATAAA	-19	NA	113448492	113460099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456257_113457087_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.7	chr6	+	1662	8	NIC	ENSMUSG00000030281.17	novel	1759	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	30	junction_1	8.77380144730519	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTAGCACTCGTGTA	NA	False	NA	4	True	AATAAA	-19	NA	113453549	113460099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113453756_113455824_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ES.29230.8	chr6	+	535	4	NNC	ENSMUSG00000030281.17	novel	1759	14	NA	NA	4192	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.7907545067406	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAAGTAGCACTCGTGT	NA	False	NA	3	True	AATAAA	-18	NA	113457740	113460098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113457779_113458144_113458197_113459243_113459329_113459738
ES.29231.1	chr6	-	4646	1	Antisense	novelGene_ENSMUSG00000030281.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCAAGAGGCCTC	NA	False	NA	NA	False	NA	NA	NA	113454620	113449974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113450000_113454600
ES.29232.1	chr6	+	2293	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	14	-1	14	1	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTCAGTCTTAACAA	1471	False	NA	14	True	AATAAA	-20	NA	113460271	113470300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.11	chr6	+	2979	8	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	141	-4	intron_retention	FALSE	canonical	3	165	junction_1	17.7660533901377	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGGAAAAGCTTCAGT	1724	False	NA	6	True	AATAAA	-12	NA	113460524	113470292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.12	chr6	+	3283	7	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	141	0	intron_retention	FALSE	canonical	3	165	junction_1	16.0900245148629	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1724	False	NA	13	True	AATAAA	-19	NA	113460524	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113465031_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.13	chr6	+	3829	5	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	157	0	intron_retention	FALSE	canonical	3	165	junction_1	14.8218588577816	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1740	False	NA	13	True	AATAAA	-19	NA	113460540	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113465031_113466752_113468613_113468698_113468854
ES.29232.14	chr6	+	5800	8	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	157	0	intron_retention	FALSE	canonical	3	8	junction_3	68.2462527938946	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAAAGCTTCAGTCTTA	1740	False	NA	10	True	AATAAA	-16	NA	113460540	113470296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113465532_113466394_113466562_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.15	chr6	+	1971	10	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	81.8649897282707	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1753	False	NA	13	True	AATAAA	-19	NA	113460553	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113461539_113465040_113465143_113465439_113465502_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.16	chr6	+	5506	8	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	32	0	intron_retention	FALSE	canonical	3	165	junction_1	15.5930387398626	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	2047	False	NA	13	True	AATAAA	-19	NA	113460847	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.17	chr6	+	5153	5	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	1751	1	intron_retention	FALSE	canonical	3	193	junction_1	9.06917857360853	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTCAGTCTTAACAA	3766	False	NA	14	True	AATAAA	-20	NA	113462566	113470300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.18	chr6	+	1854	9	NIC	ENSMUSG00000030284.12	novel	920	4	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	67.3794061639015	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	5668	False	NA	13	True	AATAAA	-19	NA	113464468	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113464880_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.2	chr6	+	1898	7	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.6802443012132	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1485	False	NA	13	True	AATAAA	-19	NA	113460285	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.3	chr6	+	2239	10	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	60.483443301289	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1514	False	NA	13	True	AATAAA	-19	NA	113460314	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466562_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.4	chr6	+	2674	9	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	57	3	57	0	intron_retention	FALSE	canonical	3	165	junction_1	18.0792526117647	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAAAGCTTCAGTCTTA	1514	False	NA	10	True	AATAAA	-16	NA	113460314	113470296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084
ES.29232.5	chr6	+	2370	9	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	58	-9	intron_retention	FALSE	canonical	3	165	junction_1	16.015617378047	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAAAATGGGAAAAGCT	1515	False	NA	1	True	AATAAA	-7	NA	113460315	113470287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113469220_113469647
ES.29232.6	chr6	+	2430	8	NIC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	41	0	intron_retention	FALSE	canonical	3	165	junction_1	16.087769470334	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1624	False	NA	13	True	AATAAA	-19	NA	113460424	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113469220_113469647
ES.29232.7	chr6	+	2227	10	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5941995957353	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTCAGTCTTAACAA	1624	False	NA	14	True	AATAAA	-20	NA	113460424	113470300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113461539_113464944_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ES.29232.8	chr6	+	2173	11	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	78.0449229610742	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1698	False	NA	13	True	AATAAA	-19	NA	113460498	113470299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469435_113469544_113469647
ES.29232.9	chr6	+	5962	9	NNC	ENSMUSG00000030284.12	novel	2306	10	NA	NA	121	0	intron_retention	FALSE	canonical	1	2	junction_7	86.1864802332709	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAGTCTTAACAACCCA	1704	False	NA	18	True	AATAAA	-24	NA	113460504	113470304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113461038_113461455_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469435_113469544_113469647
ES.29233.1	chr6	-	160	1	Intergenic	novelGene_24262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAATTAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	113468387	113468227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113468200_113468400
ES.29234.1	chr6	+	6432	46	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-36914	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.6253550067203	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTTGTTTTTGTT	201	False	NA	20	True	ATTAAA	-25	NA	113471728	113573987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113472531_113494083_113494162_113496364_113496463_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.10	chr6	+	5499	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-43	-749	-21	5	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGGTTTTTTGTTTT	NA	False	NA	16	True	ATTAAA	-21	NA	113508621	113573983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.100	chr6	+	4838	36	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-7814	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.7075004197047	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113520970	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113521000_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.101	chr6	+	5154	38	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-7522	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.1449844152536	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113521262	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113521501_113521970_113522096_113523302_113523370_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.102	chr6	+	4716	35	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-5232	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.0658259082595	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGTTGTTGTTGGTTT	NA	False	NA	8	True	ATTAAA	-13	NA	113523552	113573975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540124_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.103	chr6	+	3988	35	ISM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	14910	735	-5232	9	3prime_fragment	FALSE	canonical	3	237	junction_10	30.0775957268177	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTACCTTTTTCCT	NA	False	NA	16	True	AATAAA	-17	NA	113523552	113573243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.104	chr6	+	3924	35	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-5168	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.1597623660681	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113523616	113573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528859_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.105	chr6	+	3501	31	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-2448	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	61.0387490770321	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTACCTTTTTCCTCAC	NA	False	NA	19	True	AATAAA	-20	NA	113526336	113573246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.106	chr6	+	3552	30	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	17887	-14	-2233	14	3prime_fragment	FALSE	canonical	3	81	junction_25	48.445735606493	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACCTTTTTCCTCACTT	NA	False	NA	21	True	AATAAA	-22	NA	113526551	113573248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.107	chr6	+	3494	16	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-87	13	intron_retention	FALSE	canonical	1	1	junction_8	82.2970230324281	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTACCTTTTTCCTCACT	1441	False	NA	20	True	AATAAA	-21	NA	113545545	113573247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560114_113560496_113561809_113561904_113562432_113562505_113563170_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.108	chr6	+	2667	15	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	39167	-746	2199	2	3prime_fragment	FALSE	canonical	3	81	junction_10	64.6243856797865	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	3727	False	NA	13	True	ATTAAA	-18	NA	113547831	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.109	chr6	+	4451	8	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1710	2	intron_retention	FALSE	canonical	3	250	junction_3	41.3017764108746	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113558668	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.11	chr6	+	4906	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-21	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	59.1302199360099	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTACCTTTTTCCTCACT	NA	False	NA	20	True	AATAAA	-21	NA	113508621	113573247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525706_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.110	chr6	+	178	1	Intergenic	novelGene_24265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	472	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	113567711	113567889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113567700_113567900
ES.29234.111	chr6	+	213	1	Intergenic	novelGene_24266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAGAACATTTTAAATT	NA	False	NA	NA	False	AAAACA	-20	NA	113572520	113572733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113572500_113572700
ES.29234.112	chr6	+	1158	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-64	1	-64	-1	multi-exon	FALSE	canonical	3	441	junction_2	10.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGATGTTTATGATCTGT	NA	False	NA	10	True	AATAAA	-20	NA	113581668	113593911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113581858_113592736_113592820_113593025
ES.29234.113	chr6	+	895	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	-55	255	-55	-255	multi-exon	FALSE	canonical	3	441	junction_2	10.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGACTGTGGTGGCAA	NA	False	NA	24	True	AATAAA	-17	NA	113581677	113593657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113581858_113592736_113592820_113593025
ES.29234.114	chr6	+	6753	3	NNC	ENSMUSG00000033940.9	novel	1095	3	NA	NA	-9	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGACTGTGGTGGCA	NA	False	NA	23	True	AATAAA	-16	NA	113581723	113593656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113587763_113592736_113592820_113593025
ES.29234.116	chr6	+	6108	1	Genic_Genomic	ENSMUSG00000107937.2	novel	NA	NA	NA	NA	-1001	1054	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	113583434	113589542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_113583400_113589500
ES.29234.117	chr6	+	7471	3	NNC	ENSMUSG00000107937.2	novel	662	2	NA	NA	1528	5422	intron_retention	FALSE	non_canonical	0	0	junction_1	220.5	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTATGATCTG	NA	False	NA	9	True	AATAAA	-19	NA	113585963	113593910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113590194_113590463_113592820_113593025
ES.29234.12	chr6	+	5539	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	-21	-6	-21	6	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTTTTGTTTTT	NA	False	NA	17	True	ATTAAA	-22	NA	113508621	113573984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.13	chr6	+	5553	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	58.8197418689647	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508621	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545149_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.14	chr6	+	8637	42	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_16	60.537204454294	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508640	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113528865_113530640_113530776_113532095_113533335_113537050_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.15	chr6	+	5419	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57.0857899565731	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGGTTTTTTGTT	NA	False	NA	14	True	ATTAAA	-19	NA	113508640	113573981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.16	chr6	+	5389	43	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	86.7656453377969	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113508642	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113542668_113542789_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.17	chr6	+	1591	16	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-22	42376	0	-93	5prime_fragment	FALSE	canonical	3	240	junction_9	45.6515303382288	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGGGTGGTTAGATG	NA	False	NA	NA	False	AATAAA	-19	NA	113508642	113530858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640
ES.29234.19	chr6	+	7303	42	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	1	2	intron_retention	FALSE	canonical	1	4	junction_26	59.0432846194685	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508643	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545177_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.2	chr6	+	6350	46	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-36890	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.6253550067203	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	225	False	NA	13	True	ATTAAA	-18	NA	113471752	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113472531_113490408_113490456_113494083_113494162_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.20	chr6	+	4887	45	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	1	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	84.7647540730099	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACCTTTTTCCTCACTT	NA	False	NA	21	True	AATAAA	-22	NA	113508643	113573248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554329_113554437_113555321_113555453_113558344_113558439_113560114_113560225_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.21	chr6	+	5244	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	1	267	1	-267	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTGCTGGCTTTGTA	NA	False	NA	NA	False	TATAAA	-19	NA	113508643	113573711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.22	chr6	+	4745	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-21	-17	1	17	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTTCCTCACTTTAG	NA	False	NA	24	True	AATAAA	-25	NA	113508643	113573251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.23	chr6	+	8199	41	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	1	1	intron_retention	FALSE	canonical	3	237	junction_19	37.4338666851289	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508643	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.24	chr6	+	5775	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	3	14	intron_retention	FALSE	canonical	3	237	junction_18	38.0676462578129	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACCTTTTTCCTCACTT	NA	False	NA	21	True	AATAAA	-22	NA	113508645	113573248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.25	chr6	+	7203	42	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	3	intron_retention	FALSE	canonical	1	4	junction_24	59.4270382342054	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGGTTTTTTGTT	NA	False	NA	14	True	ATTAAA	-19	NA	113508646	113573981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113541356_113542117_113542234_113543770_113543880_113545177_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.26	chr6	+	4771	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	58.8426874920051	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACCTTTTTCCTCACTT	NA	False	NA	21	True	AATAAA	-22	NA	113508646	113573248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570197_113570293_113572848
ES.29234.27	chr6	+	4419	42	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	4	-208	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	65.9579391150315	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGGGTGTTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	113508646	113573026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.28	chr6	+	5501	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_26	58.3518171029935	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508646	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545177_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.29	chr6	+	5376	42	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	59.0638146908059	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508646	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.3	chr6	+	183	1	Intergenic	novelGene_24263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCTCTACAGACTT	5903	False	NA	NA	False	NA	NA	NA	113489504	113489687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113489500_113489700
ES.29234.30	chr6	+	5647	45	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	73.2109308270424	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113508646	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113532685_113532826_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.31	chr6	+	4743	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	59.0848360197871	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTGCCTCAGCTACCT	NA	False	NA	9	True	AATAAA	-10	NA	113508646	113573236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545665_113547843_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.34	chr6	+	3354	30	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.681228530021	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTGCCTCAGCTACC	NA	False	NA	8	True	AATAAA	-9	NA	113508648	113573235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512876_113533303_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.36	chr6	+	6277	40	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_10	81.9608636421542	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508654	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113521970_113522096_113523553_113523642_113525302_113525408_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.37	chr6	+	6168	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-10	2	intron_retention	FALSE	canonical	3	237	junction_19	37.1813902686939	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508654	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.39	chr6	+	1998	8	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-8	-7555	combination_of_known_splicesites	FALSE	canonical	2	7	junction_7	122.675779756134	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	113508656	113523396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113521970
ES.29234.4	chr6	+	3304	1	Antisense	novelGene_ENSMUSG00002075666.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAATACTAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	113502378	113505682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_113502400_113505700
ES.29234.40	chr6	+	6167	41	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_20	60.9514099508781	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113508657	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113540428_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.42	chr6	+	4659	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-7	17	combination_of_known_splicesites	FALSE	canonical	1	1	junction_26	59.3256558894381	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTTCCTCACTTTAG	NA	False	NA	24	True	AATAAA	-25	NA	113508657	113573251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.43	chr6	+	5206	43	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-7	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	67.7503252830842	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGGCTTTGTATGT	NA	False	NA	NA	False	TATAAA	-22	NA	113508657	113573714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558332_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.44	chr6	+	5616	45	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.1708310340876	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTTGTTGGTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	113508657	113573976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113511297_113511419_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.45	chr6	+	5330	42	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	68.4969332392092	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508657	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.46	chr6	+	2720	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	-7	-571	-7	571	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCAGTTTCTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	113508657	113516251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
ES.29234.47	chr6	+	5263	42	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.7866821489149	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508657	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113521970_113522096_113523610_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.48	chr6	+	5440	43	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.9613547667771	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508658	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512738_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516225_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555325_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.5	chr6	+	4732	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-42	20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	57.0857899565731	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCCTCACTTTAGATG	NA	False	NA	27	True	AATAAA	-28	NA	113508600	113573254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.50	chr6	+	4713	43	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	67.7629128526559	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCAGCTACCTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	113508659	113573241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560378_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.51	chr6	+	3068	28	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-4	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	71.6377106782514	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTACCTTTTTCCTCAC	NA	False	NA	19	True	AATAAA	-20	NA	113508660	113573246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113570190_113570293_113572848
ES.29234.52	chr6	+	4743	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	18	751	-4	-7	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGAGTTTTGCCT	NA	False	NA	0	True	AATAAA	-1	NA	113508660	113573227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.53	chr6	+	4306	35	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-4	-3875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	62.8785284700632	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113508660	113559110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540056_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344
ES.29234.54	chr6	+	5380	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_26	59.3256558894381	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508663	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.55	chr6	+	5294	43	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	74.4830559495431	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTTGTTGGTTTT	NA	False	NA	9	True	ATTAAA	-14	NA	113508663	113573976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545219_113545280_113545564_113545678_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.56	chr6	+	5348	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_28	59.5448153411664	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508663	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.58	chr6	+	5644	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1	9	intron_retention	FALSE	canonical	3	237	junction_19	37.9571007401598	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTACCTTTTTCCT	NA	False	NA	16	True	AATAAA	-17	NA	113508663	113573243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.59	chr6	+	5436	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	58.0389641783765	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508663	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523610_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.6	chr6	+	4899	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	-31	644	-31	100	multi-exon	FALSE	canonical	3	237	junction_19	37.6323336574577	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTACTGGTGGCCTAAAAG	NA	False	NA	107	True	NA	NA	NA	113508611	113573334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.60	chr6	+	5182	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	0	-475	0	-269	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACATGTGCTGGCTTTG	NA	False	NA	NA	False	TATAAA	-17	NA	113508664	113573709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.61	chr6	+	4734	44	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	0	22263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	66.9777131712852	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTATCCAAACAGAAACC	NA	False	NA	NA	False	NA	NA	NA	113508664	113596241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848_113573239_113596218
ES.29234.63	chr6	+	6041	31	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_3	64.2734522697098	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508666	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512841_113528789_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.64	chr6	+	3706	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	2	-1566	2	1566	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCAAGCTGGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	113508666	113517246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
ES.29234.65	chr6	+	3269	5	NIC	ENSMUSG00000034023.17	novel	680	6	NA	NA	2	1566	intron_retention	FALSE	canonical	3	311	junction_4	34.3684084589322	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCAAGCTGGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	113508666	113517246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513989_113514567
ES.29234.67	chr6	+	6306	42	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	2	10	intron_retention	FALSE	canonical	0	0	junction_31	60.1619764854359	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTACCTTTTTCCTC	NA	False	NA	17	True	AATAAA	-18	NA	113508666	113573244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555343_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.70	chr6	+	7061	42	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	2	-1	intron_retention	FALSE	canonical	3	237	junction_19	37.6100724418065	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113508666	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.71	chr6	+	4695	43	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.2912110472159	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCAGCTACCTTTTTCC	NA	False	NA	15	True	AATAAA	-16	NA	113508667	113573242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508702_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545177_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.74	chr6	+	4612	43	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	3	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.268515255636	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTACCTTTTTCCTCACT	NA	False	NA	20	True	AATAAA	-21	NA	113508667	113573247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508714_113510738_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.75	chr6	+	749	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	4	1389	4	-506	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGTCTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	113508668	113514291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
ES.29234.76	chr6	+	7384	42	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	4	3	intron_retention	FALSE	canonical	3	81	junction_37	50.6711528848687	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGGTTTTTTGTT	NA	False	NA	14	True	ATTAAA	-19	NA	113508668	113573981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.77	chr6	+	5527	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.8068381931679	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508668	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113509499_113509580_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.8	chr6	+	5370	34	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	-21	-3849	intron_retention	FALSE	canonical	3	237	junction_18	37.880290879272	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCATCATATCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	113508621	113559136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344
ES.29234.80	chr6	+	4752	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.9088267137598	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTTCCTCACTTTAGA	NA	False	NA	25	True	AATAAA	-26	NA	113508668	113573252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526269_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.81	chr6	+	5890	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	15	intron_retention	FALSE	canonical	3	237	junction_19	37.5722810573816	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113508668	113573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.82	chr6	+	4646	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	4	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	59.825620559117	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113508668	113573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.83	chr6	+	4694	44	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	10	15	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	58.0389641783765	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113508674	113573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523610_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.84	chr6	+	5341	42	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	66.9929364900494	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113508674	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113572848
ES.29234.85	chr6	+	5309	42	NIC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	68.5593487065219	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508676	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.86	chr6	+	4921	45	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	12	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.85645841693	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTACCTTTTTCCTCAC	NA	False	NA	19	True	AATAAA	-20	NA	113508676	113573246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510047_113510223_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.87	chr6	+	5358	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	59.7846285767417	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508677	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.88	chr6	+	5331	43	NIC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	59.4194370651034	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTTTTG	NA	False	NA	12	True	ATTAAA	-17	NA	113508677	113573979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113570190_113570293_113572848
ES.29234.89	chr6	+	3839	29	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	13	24337	13	-2662	5prime_fragment	FALSE	canonical	3	237	junction_19	40.8834050211385	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTTCATTCTAATAAAG	NA	False	NA	NA	False	NA	NA	NA	113508677	113548897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833
ES.29234.9	chr6	+	2154	16	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	-43	41834	-21	449	5prime_fragment	FALSE	canonical	3	240	junction_9	45.6515303382288	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-10	NA	113508621	113531400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640
ES.29234.90	chr6	+	6529	42	NNC	ENSMUSG00000034023.17	novel	4707	43	NA	NA	24	15	intron_retention	FALSE	canonical	0	0	junction_31	59.8662896406326	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACCTTTTTCCTCACTTT	NA	False	NA	22	True	AATAAA	-23	NA	113508688	113573249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551541_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.91	chr6	+	5545	45	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.85645841693	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113508688	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113508710_113509499_113509580_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.92	chr6	+	5452	43	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	2068	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	58.9286243386006	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTTTTGT	NA	False	NA	13	True	ATTAAA	-18	NA	113510732	113573980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561806_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.93	chr6	+	5405	42	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	2068	-741	2068	-3	3prime_fragment	FALSE	canonical	3	81	junction_37	50.3237702883843	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGTTGTTGTTGGTTT	NA	False	NA	8	True	ATTAAA	-13	NA	113510732	113573975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.95	chr6	+	4643	32	ISM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	5011	13507	5011	-3258	internal_fragment	FALSE	canonical	3	237	junction_16	32.9950016710979	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTATTGTTGGTGAT	NA	False	NA	NA	False	TTTAAA	-8	NA	113513675	113559727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344
ES.29234.96	chr6	+	5167	40	NNC	ENSMUSG00000034023.17	novel	5512	44	NA	NA	5220	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	72.4719628845477	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTGTTGTTGGTTTTT	NA	False	NA	10	True	ATTAAA	-15	NA	113513884	113573977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537013_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545177_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.97	chr6	+	532	1	ISM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	5324	1160	5324	-277	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATGAACAAAATA	NA	False	NA	NA	False	NA	NA	NA	113513988	113514520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113514000_113514500
ES.29234.98	chr6	+	4883	37	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-7821	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.8885362402264	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113520963	113573978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113521000_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29234.99	chr6	+	4109	36	NNC	ENSMUSG00000034023.17	novel	738	7	NA	NA	-7821	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.7075004197047	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTACCTTTTTCCT	NA	False	NA	16	True	AATAAA	-17	NA	113520963	113573243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113521000_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ES.29235.1	chr6	-	3716	4	NIC	ENSMUSG00000045009.10	novel	3741	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	2.16024689946929	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGTGTATGAATGTT	4276	False	NA	NA	False	TTTAAA	-22	NA	113478901	113470599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113473027_113473892_113474046_113474232_113475278_113478810
ES.29235.10	chr6	-	4950	1	NIC	ENSMUSG00000045009.10	novel	3741	4	NA	NA	398	-171	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAAGGA	4796	False	NA	NA	False	NA	NA	NA	113478381	113473431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113473400_113478400
ES.29235.11	chr6	-	1702	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205170.2	1903	3	-4	205	2	-173	multi-exon	FALSE	canonical	3	13	junction_2	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAAAAGGAAG	4325	False	NA	NA	False	NA	NA	NA	113478852	113473433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113474049_113474232_113475278_113478810
ES.29235.2	chr6	-	4606	3	NIC	ENSMUSG00000045009.10	novel	1956	3	NA	NA	1	-1	intron_retention	FALSE	canonical	2	4	junction_2	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGTGTATGAATGT	4330	False	NA	NA	False	TTTAAA	-21	NA	113478847	113470600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113474046_113474232_113475357_113478810
ES.29235.3	chr6	-	3589	5	NNC	ENSMUSG00000045009.10	novel	3424	4	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.11737237261468	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTATGTGTATGAA	4309	False	NA	NA	False	TTTAAA	-18	NA	113478868	113470603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113473027_113473892_113474046_113474232_113475032_113475121_113475278_113478810
ES.29235.4	chr6	-	4565	3	NIC	ENSMUSG00000045009.10	novel	1903	3	NA	NA	1	-7	intron_retention	FALSE	canonical	3	12	junction_1	0.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTATTTTATGTGTAT	4286	False	NA	NA	False	TTTAAA	-15	NA	113478891	113470606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113474046_113474232_113475278_113478810
ES.29235.5	chr6	-	3463	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	-40	1	-40	-1	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4245	False	NA	0	True	AATAAA	-17	NA	113478932	113470886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
ES.29235.6	chr6	-	4361	3	NIC	ENSMUSG00000045009.10	novel	1956	3	NA	NA	4	-1	intron_retention	FALSE	canonical	2	4	junction_2	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCGCTCTGGTCA	4289	False	NA	0	True	AATAAA	-17	NA	113478888	113470886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113474046_113474232_113475357_113478810
ES.29235.8	chr6	-	3500	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204268.3	3741	4	-48	289	0	-3	multi-exon	FALSE	canonical	2	4	junction_3	4.10960933531265	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCATGCCTCGCTCTGGT	4285	False	NA	-2	True	AATAAA	-15	NA	113478892	113470888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113473027_113473892_113474049_113474232_113475357_113478810
ES.29235.9	chr6	-	1902	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205170.2	1903	3	-13	14	-7	-14	multi-exon	FALSE	canonical	3	13	junction_2	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTTGGGGTTCTG	4316	False	NA	NA	False	NA	NA	NA	113478861	113473242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113474049_113474232_113475278_113478810
ES.29236.1	chr6	-	7080	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	22	-5117	-12	5117	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAAATGGTGTTTGTAG	NA	False	NA	NA	False	AGTAAA	-15	NA	113508591	113486717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ES.29236.2	chr6	-	2822	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	19	-856	-15	856	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCAGAGCTGGTCTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	113508594	113490978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ES.29236.3	chr6	-	1984	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	-2	3	-2	-3	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTTGCTTCTGTGGGT	NA	False	NA	-1	True	ATTAAA	-26	NA	113508615	113491837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ES.29236.4	chr6	-	1464	9	NNC	ENSMUSG00000030286.7	novel	1985	8	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.097147075439	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGAAAGTGTTGCTTC	NA	False	NA	-8	True	ATTAAA	-19	NA	113508610	113491844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113492394_113492901_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ES.29236.5	chr6	-	1959	8	NNC	ENSMUSG00000030286.7	novel	1985	8	NA	NA	-13	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.187690668893	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGAAAGTGTTGCTT	NA	False	NA	-9	True	ATTAAA	-18	NA	113508592	113491845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113492993_113494057_113494141_113494842_113494923_113496869_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ES.29236.6	chr6	-	7919	3	NIC	ENSMUSG00000030286.7	novel	1985	8	NA	NA	-13	-11	intron_retention	FALSE	canonical	3	321	junction_2	7	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGAAAGTGTTGCTT	NA	False	NA	-9	True	ATTAAA	-18	NA	113508626	113491845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113499369_113499710_113499769_113508288
ES.29236.8	chr6	-	3843	6	NIC	ENSMUSG00000030286.7	novel	1985	8	NA	NA	-13	-16	intron_retention	FALSE	canonical	1	10	junction_5	127.483959775338	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGCCTGTGAAAGTGT	NA	False	NA	-14	True	ATTAAA	-13	NA	113508592	113491850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113492993_113494057_113494141_113494842_113496958_113497437_113497543_113499274_113499369_113508288
ES.29236.9	chr6	-	1243	1	FSM	ENSMUSG00000030286.7	ENSMUST00000203526.2	1216	1	6	-33	6	33	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	113508573	113507330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113507300_113508600
ES.29237.1	chr6	-	202	1	Intergenic	novelGene_24264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAGAAAG	7500	False	NA	NA	False	NA	NA	NA	113524121	113523919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113523900_113524100
ES.29238.1	chr6	-	2814	1	Antisense	novelGene_ENSMUSG00000034023.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113550442	113547628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113547600_113550400
ES.29239.1	chr6	-	1480	3	NIC	ENSMUSG00000033963.17	novel	1358	4	NA	NA	-8	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAGCACATGTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	113577684	113573728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113575013_113575569_113575671_113577589
ES.29239.2	chr6	-	3923	1	NIC	ENSMUSG00000033963.17	novel	1150	5	NA	NA	25	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAGCACATGTTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	113577651	113573728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113573700_113577700
ES.2924.1	chr10	+	1968	5	FSM	ENSMUSG00000020081.6	ENSMUST00000020278.6	2258	5	296	-6	296	6	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTATATGTTTATGT	NA	False	NA	NA	False	NA	NA	NA	62088512	62101775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62088989_62093936_62094132_62096950_62097105_62097262_62097460_62100829
ES.2924.2	chr10	+	2716	5	FSM	ENSMUSG00000020081.6	ENSMUST00000020278.6	2258	5	314	-772	314	772	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGAGCTGCAGTAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	62088530	62102541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62088989_62093936_62094132_62096950_62097105_62097262_62097460_62100829
ES.2924.3	chr10	+	3616	1	Genic_Genomic	ENSMUSG00000020081.6	novel	NA	NA	NA	NA	12797	2860	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGACTGGAGATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	62101013	62104629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_62101000_62104600
ES.29240.1	chr6	+	2388	1	Intergenic	novelGene_24267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACTGCCCTTGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	113598125	113600513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_113598100_113600500
ES.29241.1	chr6	+	2756	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	41	-5	41	5	multi-exon	FALSE	canonical	3	134	junction_1	12	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGTTACCTTTTTT	199	False	NA	24	True	AATAAA	-24	NA	113600960	113608599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113601340_113605052_113605176_113606345
ES.29241.2	chr6	+	814	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	43	1935	43	-63	multi-exon	FALSE	canonical	3	134	junction_1	12	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGTTAACTAACAT	201	False	NA	NA	False	AGTAAA	-15	NA	113600962	113606659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113601340_113605052_113605176_113606345
ES.29241.3	chr6	+	3916	2	ISM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	43	3	43	-3	intron_retention	FALSE	canonical	3	134	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTACTGTGTTGTGTTA	201	False	NA	16	True	AATAAA	-16	NA	113600962	113608591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113601340_113605052
ES.29241.4	chr6	+	2603	2	NIC	ENSMUSG00000033933.14	novel	2792	3	NA	NA	64	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTACTGTGTTGTGTTAC	222	False	NA	17	True	AATAAA	-17	NA	113600983	113608592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113601340_113606345
ES.29241.5	chr6	+	1966	1	NIC	ENSMUSG00000033933.14	novel	2792	3	NA	NA	1927	-736	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3055	False	NA	NA	False	NA	NA	NA	113603816	113605782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_113603800_113605800
ES.29241.6	chr6	+	2366	2	ISM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	4131	8	-1417	-2	3prime_fragment	FALSE	canonical	3	158	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAAGCTACTGTGTTG	292	False	NA	11	True	AATAAA	-11	NA	113605050	113608586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113605176_113606345
ES.29242.1	chr6	+	3125	13	NNC	ENSMUSG00000060477.15	novel	1887	10	NA	NA	-2933	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.31958939346251	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGTCTTATAATTTT	7736	False	NA	10	True	AATAAA	-15	NA	113612494	113671971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113612615_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ES.29242.2	chr6	+	3123	3	FSM	ENSMUSG00000060477.15	ENSMUST00000204091.2	631	3	-41	-2451	-7	2451	multi-exon	FALSE	canonical	2	5	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAAGTGTGTGTGGA	NA	False	NA	NA	False	NA	NA	NA	113615420	113645421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113615603_113624599_113624783_113642663
ES.29242.3	chr6	+	3014	12	FSM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	-39	-1	1	1	multi-exon	FALSE	canonical	1	1	junction_2	7.35409033314788	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGTCTTATAATTTT	NA	False	NA	10	True	AATAAA	-15	NA	113615449	113671971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113615603_113624599_113624783_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ES.29242.4	chr6	+	3155	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	25	16	4	1	multi-exon	FALSE	canonical	2	5	junction_1	6.70820393249937	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGTCTTATAATTTT	NA	False	NA	10	True	AATAAA	-15	NA	113615452	113671971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ES.29242.5	chr6	+	2895	12	NNC	ENSMUSG00000060477.15	novel	1887	10	NA	NA	-8051	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.99379924981113	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGTCTTATAATTTTG	NA	False	NA	11	True	AATAAA	-16	NA	113637759	113671972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_113637840_113642668_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663721_113663920_113667743_113668033_113670628
ES.29242.6	chr6	+	2429	7	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	5755	-1226	5755	-2	3prime_fragment	FALSE	canonical	3	13	junction_2	4.74926894959167	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCTGGGTGAAT	1891	False	NA	24	True	AATAAA	-29	NA	113652493	113671985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ES.29242.7	chr6	+	188	1	Antisense	novelGene_ENSMUSG00000107846.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAGAGAAAAG	3063	False	NA	NA	False	NA	NA	NA	113653665	113653853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_113653700_113653900
ES.29242.8	chr6	+	1837	3	ISM	ENSMUSG00000060477.15	ENSMUST00000113024.3	1887	10	16976	-1212	-3991	1	3prime_fragment	FALSE	canonical	3	24	junction_1	1	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGTCTTATAATTTT	3001	False	NA	10	True	AATAAA	-15	NA	113663714	113671971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_113663920_113667743_113668033_113670628
ES.29242.9	chr6	+	1733	2	FSM	ENSMUSG00000060477.15	ENSMUST00000203381.2	573	2	-63	-1097	-63	1	multi-exon	FALSE	canonical	3	26	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTGTCTTATAATTTT	6929	False	NA	10	True	AATAAA	-15	NA	113667642	113671971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113668033_113670628
ES.29243.1	chr6	-	2087	1	Intergenic	novelGene_24268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATCAAAAAAAAAAAAAAAA	9717	False	NA	NA	False	NA	NA	NA	113629653	113627566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_113627600_113629700
ES.29244.1	chr6	+	3175	8	FSM	ENSMUSG00000056952.14	ENSMUST00000204753.3	2645	8	-411	-119	103	-1	multi-exon	FALSE	canonical	0	0	junction_7	1.95875845725744	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACATGTGGATATATATA	1078	False	NA	11	True	AATAAA	-17	NA	113674113	113688029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113674563_113674667_113675079_113679061_113679683_113680994_113681868_113684226_113684355_113686420_113686605_113687001_113687176_113687694
ES.29245.1	chr6	-	4987	1	Antisense	novelGene_ENSMUSG00000056952.14_AS_novelGene_ENSMUSG00000106581.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAGTAGTTTCAAAACA	9134	False	NA	NA	False	NA	NA	NA	113687569	113682582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_113682600_113687600
ES.29246.1	chr6	+	3281	2	Genic_Genomic	ENSMUSG00000097994.2	novel	1151	1	NA	NA	-3076	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGGCATACAGGTGA	4749	False	NA	NA	False	AATAAA	-12	NA	113688855	113693080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_113689488_113690431
ES.29247.1	chr6	+	6254	1	FSM	ENSMUSG00000108137.2	ENSMUST00000203364.2	929	1	-5325	0	-5325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTAATTCTGTGGTCTA	885	False	NA	NA	False	NA	NA	NA	113696858	113703112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113696900_113703100
ES.29247.2	chr6	+	5708	1	FSM	ENSMUSG00000108137.2	ENSMUST00000203364.2	929	1	-878	-3901	-878	3901	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCTGCCTCTTATTTC	3409	False	NA	NA	False	AATAAA	-17	NA	113701305	113707013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_113701300_113707000
ES.29248.1	chr6	-	1146	8	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	24	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	374.229003337229	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGTGCATCTACCTAAA	2217	False	NA	4	True	AATAAA	-37	NA	113717664	113705008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711616_113713336_113713449_113714914_113714960_113717605
ES.29248.10	chr6	-	1898	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	17	-14	intron_retention	FALSE	canonical	3	942	junction_7	76.2915995589639	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAAACTTTACTGTCA	2210	False	NA	-24	True	AATAAA	-9	NA	113717671	113705036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113705425_113706556_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.2	chr6	-	1354	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	9	-10	-7	10	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGAGTGCATCTACC	-2	True	NA	0	True	AATAAA	-33	NA	113717695	113705012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.3	chr6	-	2451	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	17	-1	intron_retention	FALSE	canonical	3	942	junction_7	54.2255305484908	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTCATCCCACACAGTGA	2210	False	NA	-11	True	AATAAA	-22	NA	113717671	113705023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.5	chr6	-	1649	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACTGTCATCCCAC	0	True	NA	-18	True	AATAAA	-15	NA	113717693	113705030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.6	chr6	-	1456	9	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	39	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	352.200382417453	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACTGTCATCCCAC	2232	False	NA	-18	True	AATAAA	-15	NA	113717649	113705030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113705425_113706556_113706704_113707295_113707586_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.7	chr6	-	2747	7	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	29	-8	intron_retention	FALSE	canonical	3	942	junction_6	58.4921647174503	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACTGTCATCCCAC	2222	False	NA	-18	True	AATAAA	-15	NA	113717659	113705030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29248.8	chr6	-	1282	9	NNC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	338.462677964647	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACTGTCATCCCAC	2222	False	NA	-18	True	AATAAA	-15	NA	113717659	113705030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_113705425_113706574_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ES.29249.1	chr6	-	7162	24	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	44	1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	9.33740571880948	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGGTTATGTTTTCCA	NA	False	NA	1	True	AATAAA	-31	NA	113868287	113722628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113732177_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.10	chr6	-	5218	22	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	31	-189	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	8.97944238177006	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	113868300	113724215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113819092_113819607_113868213
ES.29249.11	chr6	-	5207	24	NIC	ENSMUSG00000030302.18	novel	7326	24	NA	NA	43	585	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.5027735621427	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATGTCTTTGGCTATTT	NA	False	NA	NA	False	NA	NA	NA	113868288	113724669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113728524_113728652_113732177_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.12	chr6	-	4942	22	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	8	584	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	8.97337962810631	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAATGTCTTTGGCTATT	NA	False	NA	NA	False	NA	NA	NA	113868323	113724670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.13	chr6	-	5162	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	-9	576	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGTAGATAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	113868509	113724678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.14	chr6	-	4793	21	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	28	506	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	9.44404574321832	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTTGTTTCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	113868303	113724748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.15	chr6	-	5636	16	ISM	ENSMUSG00000030302.18	ENSMUST00000101044.9	4586	24	130040	-505	-47627	505	intron_retention	FALSE	canonical	3	15	junction_9	6.52652706694422	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTTGTTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	113781602	113724749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446
ES.29249.16	chr6	-	4958	20	FSM	ENSMUSG00000030302.18	ENSMUST00000089003.12	7067	20	-11	2120	-11	505	multi-exon	FALSE	canonical	0	0	junction_14	9.67906041546987	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCCTTGTTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	113868511	113724749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.17	chr6	-	5112	25	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	26	503	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.6731750977236	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTTGCCTTGTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	113868305	113724751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113728596_113728652_113732177_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.18	chr6	-	4019	20	NIC	ENSMUSG00000030302.18	novel	7326	24	NA	NA	27	-6439	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	10.2915935358391	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTTCTCAAGCAGTCG	NA	False	NA	NA	False	AATAAA	-27	NA	113868304	113732021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.19	chr6	-	4068	22	NIC	ENSMUSG00000030302.18	novel	7326	24	NA	NA	63	-6447	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	9.63435839472482	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGACCAAGAGTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	113868268	113732029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.2	chr6	-	6898	21	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	43	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	9.44404574321832	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGGTTATGTTTTCCA	NA	False	NA	1	True	AATAAA	-31	NA	113868288	113722628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.20	chr6	-	4305	23	NIC	ENSMUSG00000030302.18	novel	7326	24	NA	NA	37	-6447	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	8.47407324463106	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGACCAAGAGTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	113868463	113732029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.21	chr6	-	2332	11	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	0	13867	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	9.96192752432982	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGACATGGTTTCAGTC	NA	False	NA	NA	False	AATAAA	-22	NA	113868331	113766431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.22	chr6	-	2331	12	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	10	13834	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	6.72972928120791	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAATAAATA	NA	False	NA	NA	False	TTTAAA	-42	NA	113868321	113766464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.3	chr6	-	7179	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATGGTTATGTTTTCC	NA	False	NA	0	True	AATAAA	-30	NA	113868477	113722629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.4	chr6	-	6972	22	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	8.97337962810631	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAATGGTTATGTTTTC	NA	False	NA	-1	True	AATAAA	-29	NA	113868313	113722630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.5	chr6	-	7022	21	NIC	ENSMUSG00000030302.18	novel	7326	24	NA	NA	42	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	10.8830142883302	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATGCAATGGTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	113868289	113722635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113732177_113732350_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.6	chr6	-	5969	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	2	335	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTGAATACCATGAC	NA	False	NA	NA	False	CATAAA	-17	NA	113868329	113723691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.7	chr6	-	5757	22	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	27	190	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	8.97337962810631	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCTTGTCTGTCGGCC	NA	False	NA	NA	False	NA	NA	NA	113868304	113723836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.29249.9	chr6	-	5608	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGAGATGTATTCAGT	NA	False	NA	NA	False	AATGAA	-13	NA	113868304	113724027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
ES.2925.1	chr10	+	5263	1	Intergenic	novelGene_2248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCAAGATTTGGGGACTA	NA	False	NA	NA	False	NA	NA	NA	62167937	62173200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62167900_62173200
ES.2925.2	chr10	+	4435	2	Antisense	novelGene_ENSMUSG00000037012.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCAAGATTTGGGGACTA	NA	False	NA	NA	False	NA	NA	NA	62167942	62173200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62168143_62168965
ES.29250.1	chr6	+	5324	16	NNC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.5932193648938	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTACTTTCCAGTTG	NA	False	NA	12	True	AATAAA	-20	NA	114259710	114294493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114289492_114289885_114290501_114291255_114291424_114292265
ES.29250.12	chr6	+	3247	14	NNC	ENSMUSG00000030310.11	novel	2275	13	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.7663677638463	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTGTATTGGTTACT	NA	False	NA	3	True	AATAAA	-11	NA	114259754	114294484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288800_114292814
ES.29250.13	chr6	+	5528	16	NNC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.4604661815935	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTATTGGTTACTTT	NA	False	NA	5	True	AATAAA	-13	NA	114259757	114294486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279597_114279707_114279809_114280918_114281029_114281747_114281881_114283266_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.14	chr6	+	4381	16	NIC	ENSMUSG00000030310.11	novel	1740	13	NA	NA	-61	-10	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	23.3942063103002	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGGTGTATTGGTTAC	NA	False	NA	2	True	AATAAA	-10	NA	114276913	114294483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114277245_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.15	chr6	+	5618	13	NNC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-188	-9	intron_retention	TRUE	non_canonical	0	0	junction_8	25.0294271253303	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTGTATTGGTTACT	NA	False	NA	3	True	AATAAA	-11	NA	114278007	114294484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114278066_114278823_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114286571_114286990_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.16	chr6	+	4510	2	NIC	ENSMUSG00000030310.11	novel	722	3	NA	NA	-1117	-9	intron_retention	FALSE	canonical	3	109	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTGTATTGGTTACT	6345	False	NA	3	True	AATAAA	-11	NA	114289132	114294484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114291424_114292265
ES.29250.2	chr6	+	4182	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	118	2	-37	-2	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGTTACTTTCCAGT	NA	False	NA	10	True	AATAAA	-18	NA	114259713	114294491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.3	chr6	+	3987	17	NNC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.9179923858963	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTGTATTGGTTACTT	NA	False	NA	4	True	AATAAA	-12	NA	114259719	114294485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265_114292922_114293104
ES.29250.4	chr6	+	3952	16	NNC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.3519925393007	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTGTATTGGTTACTT	NA	False	NA	4	True	AATAAA	-12	NA	114259720	114294485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114259838_114278015_114278066_114278823_114278932_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.6	chr6	+	4365	15	NIC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-16	-10	intron_retention	FALSE	canonical	3	71	junction_3	10.3440804327886	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGGTGTATTGGTTAC	NA	False	NA	2	True	AATAAA	-10	NA	114259734	114294483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.7	chr6	+	3956	16	NIC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	23.5762592452662	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTGTATTGGTTACTT	NA	False	NA	4	True	AATAAA	-12	NA	114259743	114294485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114259838_114278015_114278066_114278823_114278959_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.8	chr6	+	3925	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	150	227	-5	-227	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATATGTAATATATG	NA	False	NA	NA	False	AGTAAA	-14	NA	114259745	114294266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29250.9	chr6	+	4975	13	NIC	ENSMUSG00000030310.11	novel	4302	16	NA	NA	-2	-8	intron_retention	FALSE	canonical	3	71	junction_3	10.6848802832164	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTGTATTGGTTACTT	NA	False	NA	4	True	AATAAA	-12	NA	114259748	114294485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114285644_114287098_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ES.29251.1	chr6	-	2320	1	Antisense	novelGene_ENSMUSG00000030310.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATGGCCTCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	114286116	114283796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_114283800_114286100
ES.29252.1	chr6	+	161	1	Intergenic	novelGene_24269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAAGTCACCCCTTC	NA	False	NA	NA	False	NA	NA	NA	114365164	114365325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_114365200_114365300
ES.29253.1	chr6	+	4540	2	ISM	ENSMUSG00000053004.10	ENSMUST00000088987.3	3782	3	-232	70278	-232	-66848	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTAAATGGTTTG	NA	False	NA	NA	False	GATAAA	-18	NA	114374664	114389979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_114374960_114385734
ES.29254.1	chr6	+	3157	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-7	-647	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620065	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.10	chr6	+	3303	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	-5	-755	2	-633	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	114620084	114836940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.11	chr6	+	3905	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	41.3278356558869	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	False	NA	NA	False	TATAAA	-13	NA	114620085	114837573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114623897_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.12	chr6	+	3153	20	NNC	ENSMUSG00000030314.17	novel	3895	20	NA	NA	-2	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.7408427568739	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620085	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683130_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114712785_114712892_114753917_114754041_114835951
ES.29254.13	chr6	+	3563	21	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	40.4913571024731	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	False	NA	NA	False	TATAAA	-13	NA	114620087	114837573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951_114836304_114836522
ES.29254.14	chr6	+	3267	21	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	-647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.1398597586965	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620087	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114648062_114648195_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.15	chr6	+	3795	20	NNC	ENSMUSG00000030314.17	novel	2459	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.9005104365502	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTTTTTTCCTACAG	NA	False	NA	NA	False	TATAAA	-15	NA	114620087	114837575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114677952_114678017_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.16	chr6	+	2859	17	NIC	ENSMUSG00000030314.17	novel	3761	19	NA	NA	-1	-647	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.3225649373032	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620088	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.18	chr6	+	3251	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	-1	-678	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.2317476480412	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114620088	114836895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114622464_114622613_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.19	chr6	+	2496	21	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.233675995097	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGCTCAGGTCCTTC	NA	False	NA	5	True	NA	NA	NA	114620090	114836184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114712785_114712892_114753917_114754041_114835951
ES.29254.2	chr6	+	2356	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	14	1391	-1	1	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGCTCAGGTCCTTC	NA	False	NA	5	True	NA	NA	NA	114620071	114836184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.20	chr6	+	4929	19	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_17	50.3882763652591	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGCTCAGGTCCTTC	NA	False	NA	5	True	NA	NA	NA	114620091	114836184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114680448_114683093_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114712785_114712892_114753917_114754041_114835951
ES.29254.21	chr6	+	2415	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	50.0282468687895	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGGCTCAGGTCCT	NA	False	NA	3	True	NA	NA	NA	114620091	114836182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114835951
ES.29254.22	chr6	+	3279	19	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4564943080401	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620091	114836185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114621054_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.23	chr6	+	2489	20	NIC	ENSMUSG00000030314.17	novel	2459	20	NA	NA	-1910	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	33.0031476715886	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGGCTCAGGTCCT	NA	False	NA	3	True	NA	NA	NA	114623896	114836182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.24	chr6	+	2262	19	NNC	ENSMUSG00000030314.17	novel	3761	19	NA	NA	-7045	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	45.3751509197232	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGCTCAGGTCCTTC	1147	False	NA	5	True	NA	NA	NA	114650077	114836184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114827484_114827574_114835951
ES.29254.25	chr6	+	2620	7	NNC	ENSMUSG00000030314.17	novel	3761	19	NA	NA	-16868	-67767	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	50.4008928492343	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGTGGAGCCTCAACAG	NA	False	NA	NA	False	AATAAA	-15	NA	114683192	114768324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114766397
ES.29254.26	chr6	+	180	1	Intergenic	novelGene_24271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	114802247	114802427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_114802200_114802400
ES.29254.27	chr6	+	356	1	Intergenic	novelGene_24272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCAACTTGCTTCCCC	NA	False	NA	NA	False	NA	NA	NA	114802250	114802606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_114802200_114802600
ES.29254.28	chr6	+	3512	2	Intergenic	novelGene_24273	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTCTGCCAAGTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	114816958	114820568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_114819571_114819668
ES.29254.3	chr6	+	2413	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCAGGTCCTTCCATGT	NA	False	NA	10	True	NA	NA	NA	114620072	114836189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.4	chr6	+	3798	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTTTTTTCCTACAG	NA	False	NA	NA	False	TATAAA	-15	NA	114620073	114837575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.6	chr6	+	3090	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	22	649	1	-647	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620079	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.7	chr6	+	3727	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	24	10	-1	-8	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTGAACAATTCTTTT	NA	False	NA	NA	False	TATAAA	-5	NA	114620081	114837565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29254.8	chr6	+	2589	21	NNC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.1558926819969	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGGCTCAGGTCCTTC	NA	False	NA	5	True	NA	NA	NA	114620083	114836184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114833095_114833288_114835951
ES.29254.9	chr6	+	3260	21	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	1	-647	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	41.3278356558869	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTGCCAAACCTTTT	NA	False	NA	NA	False	NA	NA	NA	114620083	114836926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_114620112_114623897_114624019_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ES.29255.1	chr6	-	217	1	Intergenic	novelGene_24270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAACCATAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	114632547	114632330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_114632300_114632500
ES.29256.1	chr6	-	6560	6	Antisense	novelGene_ENSMUSG00000030314.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTTTTGTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	114686907	114662307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_114663179_114672581_114672681_114673989_114674111_114678115_114678207_114678883_114680447_114683092
ES.29257.1	chr6	-	211	1	Intergenic	novelGene_24274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGTGGTCACTAATAAA	NA	False	NA	NA	False	NA	NA	NA	114842229	114842018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_114842000_114842200
ES.29258.1	chr6	-	2662	1	NIC	ENSMUSG00000030315.16	novel	2198	4	NA	NA	0	-9682	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTCTTGAGTCGTAAC	7865	False	NA	NA	False	NA	NA	NA	114852068	114849406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114849400_114852100
ES.29259.1	chr6	+	96	1	Intergenic	novelGene_24275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAAATATT	NA	False	NA	NA	False	NA	NA	NA	114891673	114891769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_114891700_114891800
ES.2926.1	chr10	+	1595	4	NNC	ENSMUSG00000085347.2	novel	343	3	NA	NA	14	1122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.78888096369861	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	62176414	62200268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62176563_62185265_62185410_62192024_62192139_62199079
ES.2926.2	chr10	+	167	1	Intergenic	novelGene_2249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	62182896	62183063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62182900_62183100
ES.29260.1	chr6	-	193	1	Intergenic	novelGene_24276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAACACTCGCTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	114899402	114899209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_114899200_114899400
ES.29261.1	chr6	-	1420	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	3	185	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	211.170547188759	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGCTATGGTTGATT	NA	False	NA	NA	False	NA	NA	NA	115014813	114981156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
ES.29261.10	chr6	-	962	7	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	168.666007903852	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115014789	114981349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ES.29261.11	chr6	-	4980	4	NNC	ENSMUSG00000030316.14	novel	1207	4	NA	NA	-4	3803	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	213.423418479687	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACAAAATGAATTCAAACA	NA	False	NA	NA	False	AATAAA	-24	NA	115014820	114997878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115002386_115009180_115009274_115011924_115012095_115014610
ES.29261.12	chr6	-	3143	3	ISM	ENSMUSG00000030316.14	ENSMUST00000112975.2	1207	4	7	4852	7	1705	5prime_fragment	FALSE	canonical	3	439	junction_1	5.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGATGATATGTGA	NA	False	NA	NA	False	NA	NA	NA	115014830	115006533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115009274_115011911_115012095_115014610
ES.29261.13	chr6	-	3224	4	ISM	ENSMUSG00000030316.14	ENSMUST00000154621.3	724	6	-30	13370	0	1705	5prime_fragment	FALSE	canonical	3	21	junction_2	197.90626288445	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGATGATATGTGA	NA	False	NA	NA	False	NA	NA	NA	115014816	115006533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115009274_115011116_115011212_115011911_115012095_115014610
ES.29261.14	chr6	-	999	4	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-7	1702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.587425407368	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTGATGATGATATG	NA	False	NA	NA	False	NA	NA	NA	115014844	115006536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115007026_115009180_115009274_115011911_115012095_115014610
ES.29261.15	chr6	-	2657	4	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	11	1701	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	196.862614248843	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTGATGATGATAT	NA	False	NA	NA	False	NA	NA	NA	115014805	115006537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115008724_115009180_115009274_115011911_115012095_115014610
ES.29261.16	chr6	-	7428	1	Genic_Genomic	ENSMUSG00000030316.14	novel	NA	NA	NA	NA	-10	819	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAATGTTTCCTTA	NA	False	NA	5	True	ATTAAA	-25	NA	115014847	115007419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_115007400_115014800
ES.29261.17	chr6	-	4885	2	NIC	ENSMUSG00000030316.14	novel	1207	4	NA	NA	-4	819	intron_retention	FALSE	canonical	3	450	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAAATGTTTCCTTA	NA	False	NA	5	True	ATTAAA	-25	NA	115014820	115007419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115012095_115014610
ES.29261.18	chr6	-	4734	2	ISM	ENSMUSG00000030316.14	ENSMUST00000112975.2	1207	4	41	5743	-10	814	intron_retention	FALSE	canonical	3	439	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTGTGCAAATGTTT	NA	False	NA	0	True	ATTAAA	-20	NA	115014796	115007424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115009274_115011911
ES.29261.19	chr6	-	2338	4	ISM	ENSMUSG00000030316.14	ENSMUST00000154621.3	724	6	-35	14261	-5	814	5prime_fragment	FALSE	canonical	3	21	junction_2	197.90626288445	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTGTGCAAATGTTT	NA	False	NA	0	True	ATTAAA	-20	NA	115014821	115007424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115009274_115011116_115011212_115011911_115012095_115014610
ES.29261.20	chr6	-	4406	3	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	12	813	intron_retention	FALSE	canonical	3	27	junction_1	211.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATGTGTGCAAATGTT	NA	False	NA	-1	True	ATTAAA	-19	NA	115014804	115007425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115008724_115009180_115012095_115014610
ES.29261.21	chr6	-	1287	4	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2	807	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	209.11612935294	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTACAAATGTGTGCA	NA	False	NA	-7	True	ATTAAA	-13	NA	115014818	115007431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115008235_115009180_115009274_115011911_115012095_115014610
ES.29261.22	chr6	-	1788	4	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	7	807	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	196.862614248843	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTACAAATGTGTGCA	NA	False	NA	-7	True	ATTAAA	-13	NA	115014830	115007431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115008724_115009180_115009274_115011911_115012095_115014610
ES.29261.23	chr6	-	2248	3	ISM	ENSMUSG00000030316.14	ENSMUST00000112975.2	1207	4	0	5754	0	803	5prime_fragment	FALSE	canonical	3	439	junction_1	5.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGTGTACAAATGTG	NA	False	NA	-11	True	ATTAAA	-9	NA	115014837	115007435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115009274_115011911_115012095_115014610
ES.29261.24	chr6	-	1459	6	NNC	ENSMUSG00000030316.14	novel	531	2	NA	NA	-10	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	175.538713678778	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGATGTCTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	115014796	115008349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115008724_115009180_115009274_115009413_115009942_115011116_115011212_115011911_115012095_115014610
ES.29261.3	chr6	-	4943	7	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	10	47	intron_retention	FALSE	canonical	3	439	junction_5	14.3372087784044	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCTTGGTAAGGTTT	NA	False	NA	13	True	NA	NA	NA	115014806	114981294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981481_114987767_114987831_114989118_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ES.29261.4	chr6	-	871	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2294	46	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCATGCTTGGTAAGGTT	NA	False	NA	12	True	NA	NA	NA	115011520	114981295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
ES.29261.5	chr6	-	1192	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	-17	-7	-17	7	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTGGCTGCTTGAA	NA	False	NA	-27	True	AATAAA	-32	NA	115014854	114981334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ES.29261.6	chr6	-	5541	1	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	2613	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	-37	True	AATAAA	-22	NA	114986885	114981344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981300_114986900
ES.29261.7	chr6	-	4972	8	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	13	-3	intron_retention	FALSE	canonical	1	9	junction_6	200.453363704399	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGTCACTCTGACTG	NA	False	NA	-37	True	AATAAA	-22	NA	115014803	114981344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_114981481_114987767_114987831_114989118_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011924_115012095_115014610
ES.29261.8	chr6	-	3756	7	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	34	junction_3	161.807927974978	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115014798	114981348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_114993043_114993190_115002234_115002386_115009180_115012095_115014610
ES.29261.9	chr6	-	1251	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	211.170547188759	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCTTGTCACTCT	NA	False	NA	-42	True	AATAAA	-17	NA	115014837	114981349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
ES.29262.1	chr6	+	3837	11	FSM	ENSMUSG00000009394.14	ENSMUST00000169345.4	3854	11	16	1	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.42693221990232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTTAAGTTGTAAA	NA	False	NA	12	True	AATAAA	-18	NA	115111878	115253519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156
ES.29262.2	chr6	+	1866	11	FSM	ENSMUSG00000009394.14	ENSMUST00000203768.3	2386	11	25	495	10	-495	multi-exon	FALSE	canonical	0	0	junction_1	2.42693221990232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCAGTGGGACTGTT	NA	False	NA	NA	False	NA	NA	NA	115111887	115251557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156
ES.29262.3	chr6	+	1463	6	NNC	ENSMUSG00000009394.14	novel	2386	11	NA	NA	14	2610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.286335345031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGAGTACTCTGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	115111924	115223728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115223159
ES.29263.1	chr6	-	4440	1	Genic_Genomic	ENSMUSG00000107704.2	novel	NA	NA	NA	NA	-4155	-7485	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGAGCACATTCCATTC	NA	False	NA	-1	True	AATAAA	-20	NA	115518016	115513576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_115513600_115518000
ES.29263.2	chr6	-	636	4	NNC	ENSMUSG00000107704.2	novel	639	3	NA	NA	-7688	-7485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.63299316185545	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGAGCACATTCCATTC	NA	False	NA	-1	True	AATAAA	-20	NA	115521549	115513576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115513925_115515501_115515577_115515893_115516008_115521450
ES.29264.1	chr6	+	4597	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	18	-259	intron_retention	FALSE	canonical	3	175	junction_1	40.5197482716761	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAACATGACATCATTGC	NA	False	NA	47	True	AATAAA	-16	NA	115521642	115555330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.10	chr6	+	1957	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	36	113	-2	-113	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTCATGATTTTCAT	NA	False	NA	NA	False	NA	NA	NA	115521660	115555476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.11	chr6	+	2012	9	NNC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-2	-8010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	96.8567724787482	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGGTGGTTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	115521660	115546942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115546063
ES.29264.12	chr6	+	4095	11	NNC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	1	-292	intron_retention	FALSE	canonical	1	9	junction_2	85.2788953962233	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTGAGAGAATAAATG	NA	False	NA	14	True	AATAAA	-14	NA	115521667	115555297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115521690_115524782_115527398_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.13	chr6	+	3007	10	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	3117	-295	intron_retention	FALSE	canonical	3	236	junction_7	25.0599281722833	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTTTTGAGAGAATAA	2678	False	NA	11	True	AATAAA	-11	NA	115524783	115555294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115552935_115553856_115553947_115554891
ES.29264.14	chr6	+	3095	2	Intergenic	novelGene_24277	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	132	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTTCCTGGGTCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	115532903	115547713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115535589_115547303
ES.29264.15	chr6	+	4917	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	11433	292	11391	-292	3prime_fragment	FALSE	canonical	3	236	junction_4	25.7452194888801	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTGAGAGAATAAATG	NA	False	NA	14	True	AATAAA	-14	NA	115533057	115555297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.16	chr6	+	2701	1	Intergenic	novelGene_24278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAACAAGCAA	NA	False	NA	NA	False	NA	NA	NA	115538659	115541360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115538700_115541400
ES.29264.17	chr6	+	181	1	Intergenic	novelGene_24279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115543705	115543886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115543700_115543900
ES.29264.18	chr6	+	3882	5	NNC	ENSMUSG00000042389.14	novel	415	4	NA	NA	-2004	-289	intron_retention	TRUE	non_canonical	0	0	junction_1	149.202882009698	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAGAGAATAAATGCAG	4712	False	NA	17	True	AATAAA	-17	NA	115549404	115555300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115550447_115550488_115550542_115550646_115552935_115553856_115553947_115554891
ES.29264.2	chr6	+	5169	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	27	-3090	-11	3090	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGTTTGTGTCAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	115521651	115558679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.3	chr6	+	1822	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	27	257	-11	-257	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGACATCATTGCCC	NA	False	NA	49	True	AATAAA	-18	NA	115521651	115555332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29264.4	chr6	+	3518	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	29	7416	-9	-6779	5prime_fragment	FALSE	canonical	3	175	junction_1	42.5474525005401	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGCTGTGCTTAAGC	NA	False	NA	NA	False	AATAAA	-14	NA	115521653	115548173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656
ES.29264.5	chr6	+	2662	8	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	34	8267	-4	-7630	5prime_fragment	FALSE	canonical	3	175	junction_1	42.5474525005401	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCTTAGTAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	115521658	115547322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656
ES.29264.6	chr6	+	601	4	FSM	ENSMUSG00000042389.14	ENSMUST00000130425.8	638	4	34	3	-4	-3	multi-exon	FALSE	canonical	3	175	junction_1	54.9201440477192	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAGGTCTCCCAGCCTT	NA	False	NA	NA	False	TATAAA	-20	NA	115521658	115531230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951
ES.29264.8	chr6	+	1701	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	-3	-288	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAGAATAAATGCAGT	NA	False	NA	18	True	AATAAA	-18	NA	115521659	115555301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ES.29265.1	chr6	-	2015	2	Antisense	novelGene_ENSMUSG00000042389.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGCTAAACAGAACAAG	7293	False	NA	NA	False	NA	NA	NA	115529690	115527095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_115527524_115528103
ES.29266.1	chr6	-	177	1	Intergenic	novelGene_24280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115578021	115577844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115577800_115578000
ES.29267.1	chr6	+	2365	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	-73	3938	-73	-3938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATTCCTGGCTTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	115578789	115595647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.12	chr6	+	1769	7	NIC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	22	-4134	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	187.80168322521	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTTCACTTGGTTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	115578884	115595451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115578975_115586541_115586671_115587479_115587662_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.14	chr6	+	1472	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	28	4730	28	4480	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGAGCTCTCAGTTGT	NA	False	NA	-80	True	NA	NA	NA	115578890	115594855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.15	chr6	+	4948	7	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	29	-947	intron_retention	FALSE	non_canonical	0	0	junction_2	242.040630198045	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACCATGTTTGGCTTC	NA	False	NA	18	True	AATAAA	-18	NA	115578891	115598638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586670_115587479_115587662_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.16	chr6	+	3039	7	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	-28	-3976	intron_retention	FALSE	non_canonical	0	0	junction_2	190.096832050288	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAATTAAAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	115578893	115595609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115587662_115588588_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.17	chr6	+	2069	6	NIC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	-28	-3976	intron_retention	FALSE	canonical	1	4	junction_3	197.604048541522	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAATTAAAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	115578893	115595609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115578975_115586541_115586671_115587479_115587662_115590287_115590503_115591535_115591647_115594258
ES.29267.18	chr6	+	2374	7	ISM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	31	3976	-28	-3976	intron_retention	FALSE	canonical	2	438	junction_3	33.5877788620934	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAATTAAAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	115578893	115595609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258
ES.29267.2	chr6	+	1654	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	4576	0	-4576	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTCCTTGC	NA	False	NA	9	True	AGTAAA	-17	NA	115578862	115595009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.20	chr6	+	4370	9	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	-28	-945	intron_retention	FALSE	canonical	0	0	junction_8	164.970451899727	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCATGTTTGGCTTCTC	NA	False	NA	20	True	AATAAA	-20	NA	115578893	115598640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554_115594788_115595671
ES.29267.21	chr6	+	10282	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	34	-4086	-25	4086	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTTTGTTTTTTTCCTGG	NA	False	NA	NA	False	AATAAA	-20	NA	115578896	115603671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.22	chr6	+	1689	8	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	-23	4566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	175.462421117713	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACTGCCATCTTTC	NA	False	NA	6	True	TTTAAA	-3	NA	115578898	115594941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590642_115591535_115591647_115594258_115594404_115594554
ES.29267.25	chr6	+	4320	9	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	2	-947	intron_retention	FALSE	canonical	2	20	junction_8	158.505520408596	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACCATGTTTGGCTTC	NA	False	NA	18	True	AATAAA	-18	NA	115578923	115598638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554_115594770_115595671
ES.29267.26	chr6	+	1908	7	NIC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	13	-3945	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	187.80168322521	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACCTGTATTCCTGG	NA	False	NA	NA	False	AATAAA	-26	NA	115578934	115595640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115578975_115586541_115586671_115587479_115587662_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.27	chr6	+	4872	9	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	14	20912	intron_retention	FALSE	non_canonical	0	0	junction_8	164.970451899727	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAACAAGATGCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	115578935	115620497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554_115598278_115620474
ES.29267.28	chr6	+	1862	7	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	25	-3976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	233.07557191225	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAAATTAAAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	115578946	115595609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115578975_115586541_115586671_115587479_115587662_115590287_115590503_115591535_115591651_115594265_115594404_115594554
ES.29267.3	chr6	+	5942	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	288	0	-288	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGCTTCTGCATGACTT	NA	False	NA	NA	False	NA	NA	NA	115578862	115599297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.30	chr6	+	3687	6	NIC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	-3531	-3944	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	200.182316901369	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCTGTATTCCTGGC	3620	False	NA	NA	False	AATAAA	-27	NA	115584723	115595641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115586671_115587479_115587662_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.31	chr6	+	4344	6	NNC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	580	-289	intron_retention	FALSE	canonical	0	0	junction_5	203.103520402774	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCTTCTGCATGACT	7731	False	NA	NA	False	NA	NA	NA	115588834	115599296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554_115594737_115595671
ES.29267.4	chr6	+	5291	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	1	938	1	-938	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTTCTCAACTATA	NA	False	NA	27	True	AATAAA	-27	NA	115578863	115598647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29267.8	chr6	+	4018	6	NIC	ENSMUSG00000000439.10	novel	6230	8	NA	NA	11	-3944	intron_retention	FALSE	canonical	3	471	junction_3	28.1538629676284	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCTGTATTCCTGGC	NA	False	NA	NA	False	AATAAA	-27	NA	115578873	115595641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115578975_115586541_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ES.29268.1	chr6	-	3169	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	28	-127	28	127	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTTCTTGCCCCCA	8172	False	NA	NA	False	AATAAA	-18	NA	115653568	115595402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.10	chr6	-	6047	6	NIC	ENSMUSG00000000441.18	novel	2946	17	NA	NA	74	11	intron_retention	FALSE	canonical	3	610	junction_5	70.3914767567779	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	NA	False	NA	-17	True	AATAAA	-26	NA	115603916	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115603370_115603672
ES.29268.11	chr6	-	6572	7	NIC	ENSMUSG00000000441.18	novel	2946	17	NA	NA	-1435	11	intron_retention	FALSE	canonical	3	610	junction_5	67.7464636223422	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	NA	False	NA	-17	True	AATAAA	-26	NA	115605463	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596878_115597169_115597289_115598776_115598824_115599837_115603370_115603672_115603801_115603899
ES.29268.12	chr6	-	2912	17	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	114	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	192.096289331679	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	8258	False	NA	-17	True	AATAAA	-26	NA	115653482	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597262_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.13	chr6	-	4453	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	88	11	intron_retention	FALSE	canonical	3	610	junction_7	72.9438139940598	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	8232	False	NA	-17	True	AATAAA	-26	NA	115653508	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.15	chr6	-	5158	6	ISM	ENSMUSG00000000441.18	ENSMUST00000130528.8	3968	11	8916	525	1324	5	3prime_fragment	FALSE	canonical	3	677	junction_4	46.518813398452	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	NA	False	NA	-23	True	AATAAA	-20	NA	115602666	115595552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115598824_115599837_115600015_115600424
ES.29268.16	chr6	-	5749	7	NNC	ENSMUSG00000000441.18	novel	3968	11	NA	NA	-1032	5	intron_retention	TRUE	non_canonical	0	0	junction_6	274.656603780066	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	NA	False	NA	-23	True	AATAAA	-20	NA	115605060	115595552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115600015_115600424_115600510_115603251_115603370_115603672_115604752_115604815
ES.29268.18	chr6	-	2986	17	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	190.293923559713	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	8146	False	NA	-23	True	AATAAA	-20	NA	115653594	115595552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614618_115614673_115621370_115621604_115653196
ES.29268.19	chr6	-	2994	18	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	85	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	321.367622496305	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTACTGACTCCTTCA	8229	False	NA	-23	True	AATAAA	-20	NA	115653511	115595552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597282_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607636_115608175_115608330_115609857_115609957_115611508_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.20	chr6	-	3397	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	59	4	intron_retention	FALSE	canonical	3	610	junction_7	74.4163661808043	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCTACTGACTCCTTC	8203	False	NA	-24	True	AATAAA	-19	NA	115653537	115595553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.22	chr6	-	4052	16	NNC	ENSMUSG00000000441.18	novel	2946	17	NA	NA	-131	3	intron_retention	FALSE	canonical	1	6	junction_5	252.314741719323	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCTACTGACTCCTT	8684	False	NA	-25	True	AATAAA	-18	NA	115653056	115595554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115600015_115600438_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115652649
ES.29268.23	chr6	-	3033	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	102	2	intron_retention	FALSE	canonical	3	610	junction_7	74.7860949642378	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGGCTACTGACTCCT	8246	False	NA	-26	True	AATAAA	-17	NA	115653494	115595555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.26	chr6	-	4642	14	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	27	1	intron_retention	FALSE	canonical	1	2	junction_8	211.419798885882	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAATGGCTACTGACTCC	8171	False	NA	-27	True	AATAAA	-16	NA	115653569	115595556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.27	chr6	-	2962	17	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	185.507822864024	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8169	False	NA	-28	True	AATAAA	-15	NA	115653571	115595557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596574_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.28	chr6	-	3093	18	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	237.908417726052	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8170	False	NA	-28	True	AATAAA	-15	NA	115653570	115595557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115646308_115646386_115653196
ES.29268.29	chr6	-	4353	15	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	113	0	intron_retention	FALSE	canonical	3	610	junction_6	75.2950997131708	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8257	False	NA	-28	True	AATAAA	-15	NA	115653483	115595557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.3	chr6	-	3107	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	-37	0	-37	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	8107	False	NA	0	True	AATAAA	-43	NA	115653633	115595529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.30	chr6	-	7102	18	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	30	0	intron_retention	TRUE	non_canonical	0	0	junction_10	247.321624932333	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8174	False	NA	-28	True	AATAAA	-15	NA	115653566	115595557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115604752_115604815_115605560_115605653_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.31	chr6	-	5170	14	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	62	0	intron_retention	FALSE	canonical	3	610	junction_5	77.6271623296958	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8206	False	NA	-28	True	AATAAA	-15	NA	115653534	115595557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.33	chr6	-	3036	16	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	159	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.587044109678	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	8303	False	NA	-29	True	AATAAA	-14	NA	115653437	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115598503_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.34	chr6	-	5471	15	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	72	-1	intron_retention	FALSE	canonical	3	610	junction_6	73.5940672520134	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	8216	False	NA	-29	True	AATAAA	-14	NA	115653524	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.35	chr6	-	2719	17	NNC	ENSMUSG00000000441.18	novel	2946	17	NA	NA	554	-1	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_16	181.667009508469	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	9369	False	NA	-29	True	AATAAA	-14	NA	115652371	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115652293
ES.29268.37	chr6	-	2928	18	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	114	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	286.586858878178	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	8258	False	NA	-29	True	AATAAA	-14	NA	115653482	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614618_115614673_115621370_115621604_115653196
ES.29268.39	chr6	-	2831	17	FSM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	86	29	86	-1	multi-exon	FALSE	canonical	1	24	junction_16	182.118597605379	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	8901	False	NA	-29	True	AATAAA	-14	NA	115652839	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115652649
ES.29268.4	chr6	-	3012	18	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	114	-4	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	245.930392154909	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCAGTGCAGTTTC	8258	False	NA	-4	True	AATAAA	-39	NA	115653482	115595533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.40	chr6	-	3147	15	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	144	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	270.700904305539	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	8288	False	NA	-29	True	AATAAA	-14	NA	115653452	115595558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597283_115598776_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.43	chr6	-	2769	15	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	203.218804870665	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTAATGGCTACTGAC	8169	False	NA	-30	True	AATAAA	-13	NA	115653571	115595559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.44	chr6	-	2899	17	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	106	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	254.172677524552	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTAATGGCTACTGAC	8250	False	NA	-30	True	AATAAA	-13	NA	115653490	115595559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597287_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611546_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.45	chr6	-	3352	16	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	114	-2	intron_retention	FALSE	canonical	0	0	junction_5	198.38776844016	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTAATGGCTACTGAC	8258	False	NA	-30	True	AATAAA	-13	NA	115653482	115595559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599821_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.46	chr6	-	4145	17	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	88	-3	intron_retention	FALSE	canonical	0	0	junction_10	192.156674357151	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTTAATGGCTACTGA	8232	False	NA	-31	True	AATAAA	-12	NA	115653508	115595560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115606981_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.47	chr6	-	2659	14	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	106	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	210.889830741217	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTTAATGGCTACTGA	8250	False	NA	-31	True	AATAAA	-12	NA	115653490	115595560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.48	chr6	-	2811	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	98	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	190.088704439679	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATTAAATTTA	8242	False	NA	-48	True	AATACA	-22	NA	115653498	115595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115621370_115621604_115653196
ES.29268.49	chr6	-	2997	18	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	30	-20	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	283.351347551356	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATTAAATTTA	8174	False	NA	-48	True	AATACA	-22	NA	115653566	115595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596574_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.50	chr6	-	3144	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	26	-21	combination_of_known_junctions	FALSE	canonical	3	610	junction_7	71.7484494605981	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAATAAATTAAATTT	8170	False	NA	-49	True	AATACA	-21	NA	115653570	115595578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.51	chr6	-	2934	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	30	106	30	-78	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTTAATTTTGTT	8174	False	NA	-106	True	AATACA	-15	NA	115653566	115595635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.52	chr6	-	5533	5	NIC	ENSMUSG00000000441.18	novel	2277	7	NA	NA	82	253	intron_retention	FALSE	canonical	3	616	junction_1	102.477741485651	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCCTTGACACCTGT	8226	False	NA	NA	False	NA	NA	NA	115653514	115606905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.54	chr6	-	2503	7	FSM	ENSMUSG00000000441.18	ENSMUST00000127503.2	2277	7	27	-253	27	253	multi-exon	FALSE	canonical	3	616	junction_3	87.1080108575299	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCCTTGACACCTGT	8171	False	NA	NA	False	NA	NA	NA	115653569	115606905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.55	chr6	-	3952	6	NIC	ENSMUSG00000000441.18	novel	2277	7	NA	NA	106	253	intron_retention	FALSE	canonical	3	616	junction_2	93.6687781493919	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCCTTGACACCTGT	8250	False	NA	NA	False	NA	NA	NA	115653490	115606905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.56	chr6	-	3975	6	NIC	ENSMUSG00000000441.18	novel	2277	7	NA	NA	112	253	intron_retention	FALSE	canonical	3	616	junction_2	94.1925687090017	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCCTTGACACCTGT	8256	False	NA	NA	False	NA	NA	NA	115653484	115606905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115608330_115609857_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.57	chr6	-	3275	5	NIC	ENSMUSG00000000441.18	novel	2277	7	NA	NA	27	-2060	intron_retention	FALSE	canonical	3	616	junction_1	102.477741485651	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAACTTGCCTTGAG	8171	False	NA	NA	False	AATAAA	-34	NA	115653569	115609218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.6	chr6	-	3022	16	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	37	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	197.694309478042	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAAACTTGCAGTGCAG	8181	False	NA	-8	True	AATAAA	-35	NA	115653559	115595537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603826_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.7	chr6	-	5789	15	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	111	-11	intron_retention	FALSE	canonical	3	610	junction_7	77.1701340664686	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTCAAAACTTGCAGTG	8255	False	NA	-11	True	AATAAA	-32	NA	115653485	115595540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115603370_115603672_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.8	chr6	-	4819	15	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	132	11	intron_retention	FALSE	canonical	3	610	junction_6	74.9832634387059	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	8276	False	NA	-17	True	AATAAA	-26	NA	115653464	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ES.29268.9	chr6	-	3318	16	NNC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	86	11	intron_retention	FALSE	canonical	1	2	junction_13	196.456339509147	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTCCTTCAAAACTT	8230	False	NA	-17	True	AATAAA	-26	NA	115653510	115595546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614618_115614673_115621370_115621604_115653196
ES.29269.1	chr6	+	200	2	Intergenic	novelGene_24281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115657472	115667938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115657630_115667895
ES.2927.1	chr10	-	5628	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	337	-1687	337	1687	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATGGTGTCGATGACA	NA	False	NA	NA	False	AATAAA	-18	NA	62175984	62102946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.11	chr10	-	3910	18	NIC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	115.825545944863	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62163592	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62163181
ES.2927.12	chr10	-	3759	19	NIC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	339	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	146.937964570423	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62175982	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.14	chr10	-	3602	18	NNC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	-3601	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.825545944863	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62157773	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62157670
ES.2927.16	chr10	-	3692	18	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	343	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.827338389256	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62175978	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107361_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.17	chr10	-	3399	17	NNC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	6739	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	119.390231358139	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62147433	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62147370
ES.2927.2	chr10	-	4873	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	395	-990	395	990	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTCGGTCATGCTA	NA	False	NA	NA	False	NA	NA	NA	62175926	62103643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.20	chr10	-	3665	20	NNC	ENSMUSG00000037012.19	novel	3851	22	NA	NA	-608	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	174.168956719516	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62194749	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62188836_62188885_62194114_62194210_62194726
ES.2927.21	chr10	-	3657	18	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	366	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	115.786553414276	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGGAGTGGTGTTTCC	NA	False	NA	-6	True	AGTAAA	-16	NA	62175955	62104885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126166_62128088_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.22	chr10	-	3556	18	NNC	ENSMUSG00000037012.19	novel	3639	20	NA	NA	-3262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.825545944863	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	NA	False	NA	-7	True	AGTAAA	-15	NA	62157434	62104886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62157373
ES.2927.27	chr10	-	3212	19	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	375	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.56405583785	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	NA	False	NA	-7	True	AGTAAA	-15	NA	62175946	62104886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105181_62105618_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.28	chr10	-	5240	11	NIC	ENSMUSG00000037012.19	novel	3639	20	NA	NA	-5558	0	intron_retention	FALSE	canonical	3	422	junction_10	40.0849098789058	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	NA	False	NA	-7	True	AGTAAA	-15	NA	62131666	62104886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481
ES.2927.29	chr10	-	3630	18	NNC	ENSMUSG00000037012.19	novel	3639	20	NA	NA	5101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	115.825545944863	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	NA	False	NA	-7	True	AGTAAA	-15	NA	62171220	62104886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151428_62171185
ES.2927.3	chr10	-	5116	18	NIC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	-15	988	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	115.825545944863	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTCGGTCATGC	NA	False	NA	NA	False	NA	NA	NA	62163561	62103645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62163181
ES.2927.32	chr10	-	2995	19	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	372	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.56405583785	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTCGGAGTGGTGTTT	NA	False	NA	-8	True	AGTAAA	-14	NA	62175949	62104887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62104979_62105635_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.33	chr10	-	3888	19	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	380	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	177.253393287967	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTCGGAGTGGTGTT	NA	False	NA	-9	True	AGTAAA	-13	NA	62175941	62104888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116913_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62161729_62161974_62175791
ES.2927.34	chr10	-	3527	18	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	-158	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.825545944863	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTCGGAGTGGTGTT	NA	False	NA	-9	True	AGTAAA	-13	NA	62163704	62104888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62163670
ES.2927.35	chr10	-	3846	7	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	339	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	186.284430076399	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTCGGAGTGGTGTT	NA	False	NA	-9	True	AGTAAA	-13	NA	62175982	62104888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110225_62111644_62116811_62116912_62117589_62118483_62151264_62151328_62175791
ES.2927.36	chr10	-	1245	8	NNC	ENSMUSG00000037012.19	novel	784	7	NA	NA	338	1559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.419475635801	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGTGCTGTGCTGACA	NA	False	NA	NA	False	AATAAA	-17	NA	62175983	62130079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62130321_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.4	chr10	-	4290	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	-10	-2	-10	2	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTTCAGACAAGGGCT	NA	False	NA	NA	False	AATAAA	-21	NA	62176331	62104631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.6	chr10	-	4104	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	-71	245	-71	4	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGTTTCCTTGGGGT	NA	False	NA	1	True	AGTAAA	-23	NA	62176392	62104878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.7	chr10	-	3278	19	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	372	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.56405583785	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62175949	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105180_62105558_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.2927.8	chr10	-	3674	18	NNC	ENSMUSG00000037012.19	novel	4278	18	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.476935922183	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGAGTGGTGTTTCCTTG	NA	False	NA	-3	True	AGTAAA	-19	NA	62175954	62104882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62105836_62107367_62107602_62110213_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ES.29270.1	chr6	-	1369	1	Intergenic	novelGene_24282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	115662425	115661056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115661100_115662400
ES.29271.1	chr6	+	984	4	Intergenic	novelGene_24283	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGACCTTGGTGTGGA	2652	False	NA	NA	False	NA	NA	NA	115679386	115694525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115679491_115680748_115680864_115692624_115692840_115693975
ES.29272.1	chr6	-	365	1	Intergenic	novelGene_24284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATCAGTAACT	3958	False	NA	NA	False	NA	NA	NA	115681516	115681151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115681200_115681500
ES.29273.1	chr6	+	2400	3	Antisense	novelGene_ENSMUSG00000059900.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCCTGG	NA	False	NA	NA	False	NA	NA	NA	115708132	115720957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_115708400_115718480_115718649_115718992
ES.29274.1	chr6	-	2923	11	NIC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-28	0	intron_retention	FALSE	canonical	3	12	junction_8	21.7460341211909	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	115739399	115706091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115739233
ES.29274.10	chr6	-	1427	11	NIC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	21.936271333114	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115736247	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115719270_115719349_115735898
ES.29274.11	chr6	-	1060	10	NIC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	22.2782626713647	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115735955	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115735898
ES.29274.12	chr6	-	3239	10	NIC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-61	0	intron_retention	FALSE	canonical	3	12	junction_7	22.9104537032528	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115739432	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710989_115711770_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115739233
ES.29274.13	chr6	-	1307	12	NNC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-930	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	21.3297603757274	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115737162	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115737065
ES.29274.14	chr6	-	1247	12	NNC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-873	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	21.523003262126	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115737105	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115719270_115719349_115736555_115736685_115737065
ES.29274.15	chr6	-	1508	13	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-1008	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_11	23.0197680749008	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGTCGACTAA	NA	False	NA	NA	False	AATAAA	-19	NA	115737240	115706102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115736560_115736685_115737065
ES.29274.16	chr6	-	845	5	NNC	ENSMUSG00000059900.15	novel	927	7	NA	NA	3218	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	31.2599984005118	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGTCGACTAA	NA	False	NA	NA	False	AATAAA	-19	NA	115708694	115706102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115708602
ES.29274.17	chr6	-	1324	11	FSM	ENSMUSG00000059900.15	ENSMUST00000170625.8	843	11	-53	-428	-53	0	multi-exon	FALSE	canonical	2	4	junction_8	22.4686448189471	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCGACTA	NA	False	NA	NA	False	AATAAA	-18	NA	115739424	115706103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115718501_115718634_115719270_115719349_115739233
ES.29274.19	chr6	-	496	5	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-405	-6220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.82344135219425	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTGTCCGCATTTAGG	NA	False	NA	NA	False	NA	NA	NA	115736637	115712813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115713021_115713343_115713398_115715908_115715984_115719270_115719349_115736555
ES.29274.2	chr6	-	5694	10	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-951	0	intron_retention	TRUE	canonical	3	12	junction_6	24.9310159350869	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTAAATATTCCTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	115737183	115706091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115710989_115711770_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115736555_115736685_115737065
ES.29274.20	chr6	-	2194	6	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	-947	-8078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.49307323229917	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATATCTGATTCCC	NA	False	NA	NA	False	NA	NA	NA	115737179	115714671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115715984_115718501_115718634_115719270_115719349_115735898_115736328_115736555_115736685_115737065
ES.29274.3	chr6	-	1137	11	NNC	ENSMUSG00000059900.15	novel	1554	12	NA	NA	1309	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.4454686453481	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCGACTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	115738017	115706100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115719270_115719349_115737959
ES.29274.4	chr6	-	1128	10	NNC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-958	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	21.1029223884592	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115737190	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115737065
ES.29274.5	chr6	-	1474	11	NIC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	23.9501565756886	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115736237	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115718501_115718634_115719270_115719349_115735898
ES.29274.6	chr6	-	5369	11	NNC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	-929	0	intron_retention	FALSE	canonical	3	12	junction_7	23.6550206087418	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115737161	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115710663_115710955_115710989_115711770_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115736555_115736685_115737065
ES.29274.7	chr6	-	1163	11	NIC	ENSMUSG00000059900.15	novel	1272	12	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	20.1992574120932	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115739318	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115719270_115719349_115739233
ES.29274.8	chr6	-	1209	10	NIC	ENSMUSG00000059900.15	novel	843	11	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	20.2319878739914	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115739439	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115719270_115719349_115739233
ES.29274.9	chr6	-	1351	12	FSM	ENSMUSG00000059900.15	ENSMUST00000166254.7	811	12	-48	-492	-3	0	multi-exon	FALSE	canonical	3	12	junction_9	20.7428171377448	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115739374	115706101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115739233
ES.29275.1	chr6	+	4333	16	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	-9994	-1157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7941950595439	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGTTTCTCTTTGTAG	9535	False	NA	NA	False	TATAAA	-21	NA	115741504	115781361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115741584_115750451_115750530_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.10	chr6	+	5169	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	37	268	37	-268	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	115751535	115782250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.11	chr6	+	6251	15	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	59	-1081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.6027134004133	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATCTGAGTTAATAACAT	NA	False	NA	NA	False	ATTAAA	-15	NA	115751557	115781437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115772050_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.12	chr6	+	4240	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	61	1173	61	-1173	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTTTGATTTTTAAGACA	NA	False	NA	NA	False	TATAAA	-5	NA	115751559	115781345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.13	chr6	+	3219	14	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	62	-690	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.2328068388102	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTCTCCAGTCATTTA	NA	False	NA	16	True	AATAAA	-13	NA	115751560	115781828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.14	chr6	+	5517	15	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	62	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.4017127625072	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCTACTCATTTTC	NA	False	NA	NA	False	CATAAA	-10	NA	115751560	115782511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768517_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.15	chr6	+	4756	16	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	62	-679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7941950595439	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTAAGTGTCACCCG	NA	False	NA	27	True	AATAAA	-24	NA	115751560	115781839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751640_115752136_115752160_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.16	chr6	+	4000	16	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	65	-1659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	27.5556810032987	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCTTGGCCTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	115751563	115780859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778392_115778643_115778809_115778918_115780597
ES.29275.17	chr6	+	3638	14	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	65	-268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.2328068388102	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	115751563	115782250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.18	chr6	+	5347	9	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	12407	-688	intron_retention	FALSE	canonical	3	54	junction_5	12.810518139404	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCCAGTCATTTAAG	1629	False	NA	18	True	AATAAA	-15	NA	115763905	115781830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115763943_115764090_115764231_115766399_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.19	chr6	+	6333	5	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	17097	-268	intron_retention	FALSE	canonical	3	54	junction_1	14.142135623731	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	6319	False	NA	NA	False	NA	NA	NA	115768595	115782250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.2	chr6	+	4966	16	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	-288	-651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.8432801769535	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTCTGAACTCCATTA	NA	False	NA	55	True	NA	NA	NA	115751210	115781867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751378_115751522_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.20	chr6	+	3207	1	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	27545	-268	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	4457	False	NA	NA	False	NA	NA	NA	115779043	115782250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115779000_115782200
ES.29275.21	chr6	+	2884	1	Genic_Genomic	ENSMUSG00000030319.9	novel	NA	NA	NA	NA	29141	1005	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCAATGTCAAGAGTAT	6053	False	NA	NA	False	AATAAA	-20	NA	115780639	115783523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_115780600_115783500
ES.29275.3	chr6	+	5067	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	-249	656	-249	-656	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAACCCTTCTGAACTC	NA	False	NA	50	True	AAAAAG	-44	NA	115751249	115781862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.4	chr6	+	5493	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	-17	-2	-17	2	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCATTTTCTTCGCTGCG	NA	False	NA	NA	False	CATAAA	-19	NA	115751481	115782520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.5	chr6	+	3810	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	5	1659	5	-1659	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCCTTGGCCTCTTCTGT	NA	False	NA	NA	False	NA	NA	NA	115751503	115780859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.6	chr6	+	4405	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	9	1060	9	-1060	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGCTCTCCTCACAGG	NA	False	NA	NA	False	ATTAAA	-36	NA	115751507	115781458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.7	chr6	+	5348	14	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	10	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	22.1378147123127	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCATCTACTCATTTT	NA	False	NA	NA	False	CATAAA	-9	NA	115751508	115782510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115780597
ES.29275.8	chr6	+	6325	16	NNC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	33	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.6831276331912	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTAAGCTAGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	115751531	115782250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115767742_115767947_115768051_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29275.9	chr6	+	2574	10	NIC	ENSMUSG00000030319.9	novel	5474	15	NA	NA	35	-681	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.3256538444132	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCATTTAAGTGTCACC	NA	False	NA	25	True	AATAAA	-22	NA	115751533	115781837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ES.29276.1	chr6	-	174	1	Intergenic	novelGene_24285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTCTGGACAAT	NA	False	NA	NA	False	NA	NA	NA	115746568	115746394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115746400_115746600
ES.29277.1	chr6	-	174	1	Intergenic	novelGene_24286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	115765116	115764942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115764900_115765100
ES.29278.1	chr6	-	598	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	-61	-20	-61	20	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGATTGTTCTTTGCTGC	NA	False	NA	-4	True	AATAAA	-42	NA	115785769	115782445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ES.29278.10	chr6	-	324	3	NIC	ENSMUSG00000057841.6	novel	517	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_1	7052.5	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785704	115782472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115782650_115784762_115784864_115785658
ES.29278.11	chr6	-	497	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7729.35604619744	1089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785704	115782472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115782650_115783946_115784120_115784762_115784864_115785658
ES.29278.14	chr6	-	2593	2	NIC	ENSMUSG00000057841.6	novel	906	3	NA	NA	8	-1	intron_retention	FALSE	canonical	3	17956	junction_1	0	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTATTTTCTATGTTT	NA	False	NA	24	True	AATAAA	-14	NA	115785700	115782473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115784129_115784762
ES.29278.15	chr6	-	709	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	135	-1	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_3	8438.61374871489	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTATTTTCTATGTTT	NA	False	NA	24	True	AATAAA	-14	NA	115785573	115782473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785323
ES.29278.2	chr6	-	1170	3	NIC	ENSMUSG00000057841.6	novel	517	4	NA	NA	-14	5	intron_retention	FALSE	canonical	3	14202	junction_2	1871	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTGGTAACTGGAG	NA	False	NA	-19	True	AATAAA	-27	NA	115785722	115782460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115782650_115783946_115784864_115785658
ES.29278.3	chr6	-	695	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8461.71256635178	1089	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATGTTTTTGGTAA	NA	False	NA	-25	True	AATAAA	-21	NA	115785330	115782466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785101
ES.29278.7	chr6	-	837	4	NNC	ENSMUSG00000057841.6	novel	906	3	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	8439.08515315625	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785665	115782472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785288
ES.29278.8	chr6	-	3232	1	FSM	ENSMUSG00000064563.3	ENSMUST00000082629.3	140	1	-629	-2463	-629	2463	mono-exon	FALSE	NA	NA	NA	NA	NA	1089	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785704	115782472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115782500_115785700
ES.29279.1	chr6	+	184	1	Intergenic	novelGene_24288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAT	3725	False	NA	NA	False	NA	NA	NA	115812814	115812998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115812800_115813000
ES.2928.1	chr10	+	116	1	Intergenic	novelGene_2252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATAATTTTT	556	False	NA	NA	False	NA	NA	NA	62231977	62232093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62232000_62232100
ES.29280.1	chr6	-	2600	9	FSM	ENSMUSG00000030321.16	ENSMUST00000184428.6	2384	9	-52	-164	-52	-3	multi-exon	FALSE	canonical	1	3	junction_5	2.36841191518705	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCTCGTGTGATTTC	NA	False	NA	NA	False	AATAAA	-34	NA	115815425	115787692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115788195_115789154_115789212_115791461_115791613_115792898_115793113_115794193_115794391_115797005_115797163_115799077_115799264_115800217_115800673_115814744
ES.29280.2	chr6	-	370	1	Intergenic	novelGene_24287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAACCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	115793993	115793623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115793600_115794000
ES.29280.3	chr6	-	3318	2	NIC	ENSMUSG00000030321.16	novel	2551	9	NA	NA	-38	-10165	intron_retention	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACTTTTCTTTATGAAC	NA	False	NA	NA	False	NA	NA	NA	115815411	115798021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115800673_115814744
ES.29281.1	chr6	-	3631	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	-7	-10	-7	10	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTCTTGACCACT	7874	False	NA	NA	False	AATAAA	-31	NA	115830339	115817647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ES.29281.10	chr6	-	3647	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	8	-9	intron_retention	FALSE	canonical	0	0	junction_7	48.2518900972717	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7895	False	NA	NA	False	AATAAA	-12	NA	115830318	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821184_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ES.29281.11	chr6	-	3506	9	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	7	-9	intron_retention	FALSE	canonical	0	0	junction_6	45.8530260724415	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7894	False	NA	NA	False	AATAAA	-12	NA	115830319	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115825931_115826016_115826694_115827578_115827801_115830097
ES.29281.14	chr6	-	4081	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	-1	-9	intron_retention	FALSE	canonical	0	0	junction_7	37.2010533096435	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7886	False	NA	NA	False	AATAAA	-12	NA	115830327	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115829616
ES.29281.15	chr6	-	6253	5	NNC	ENSMUSG00000030322.13	novel	2064	5	NA	NA	-704	-9	intron_retention	TRUE	non_canonical	1	3	junction_4	44.7772263544762	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	NA	False	NA	NA	False	AATAAA	-12	NA	115826631	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115823862_115824076
ES.29281.16	chr6	-	5663	7	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	3	-9	intron_retention	FALSE	canonical	0	0	junction_6	54.1892260714454	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7890	False	NA	NA	False	AATAAA	-12	NA	115830323	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115821184_115821530_115821681_115822274_115822410_115822503_115822579_115825355_115826694_115827578_115827801_115830097
ES.29281.18	chr6	-	4021	7	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	8	-11	intron_retention	FALSE	canonical	0	0	junction_6	48.9829902449139	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTAAGGTCCCTTT	7895	False	NA	NA	False	AATAAA	-10	NA	115830318	115817668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115822410_115822503_115822579_115826028_115826694_115827578_115827801_115830097
ES.29281.19	chr6	-	6080	7	NNC	ENSMUSG00000030322.13	novel	2924	8	NA	NA	35	-12	intron_retention	FALSE	canonical	1	1	junction_1	48.3439643480847	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAAGTAAGGTCCCTT	7922	False	NA	NA	False	AATAAA	-9	NA	115830291	115817669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115821184_115821530_115821681_115822274_115822410_115822503_115822579_115825355_115826694_115827578_115827801_115829645
ES.29281.2	chr6	-	4087	8	NIC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	-21	0	intron_retention	FALSE	canonical	3	62	junction_7	15.9770243200181	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTTGGCATTGTGTT	7860	False	NA	NA	False	AATAAA	-21	NA	115830353	115817657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115829645
ES.29281.20	chr6	-	3382	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	-21	245	intron_retention	FALSE	canonical	0	0	junction_3	47.2829088507439	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGTCTGTCTGTCTTG	7860	False	NA	NA	False	ACTAAA	-15	NA	115830353	115817914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822270_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ES.29281.21	chr6	-	3583	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	-5	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.6306339507486	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCAGTCATCATGGTA	7876	False	NA	NA	False	AATAAA	-31	NA	115830337	115818260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821184_115821530_115821681_115822274_115822410_115822503_115822579_115825355_115826694_115827578_115827801_115830097
ES.29281.22	chr6	-	2060	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	-2	1556	-2	91	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACCAGCACTCCTGCTA	7879	False	NA	NA	False	NA	NA	NA	115830334	115819213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ES.29281.23	chr6	-	6975	6	NNC	ENSMUSG00000030322.13	novel	2924	8	NA	NA	8	-152	intron_retention	TRUE	non_canonical	0	0	junction_3	48.4190045333441	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATCTTGAAGCTGCCTG	7895	False	NA	NA	False	AATAAA	-38	NA	115830318	115819456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115821184_115821530_115821681_115822274_115823865_115824080_115826694_115827578_115827801_115829645
ES.29281.24	chr6	-	4027	4	NNC	ENSMUSG00000030322.13	novel	2415	3	NA	NA	-1	1749	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.2769948578667	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTCATGATAGAGTC	7886	False	NA	NA	False	AGTAAA	-10	NA	115830327	115822903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115823862_115824076_115826694_115827578_115827801_115830097
ES.29281.25	chr6	-	179	1	Intergenic	novelGene_24289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115824076	115823897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115823900_115824100
ES.29281.26	chr6	-	2456	3	FSM	ENSMUSG00000030322.13	ENSMUST00000122816.3	2415	3	-52	11	25	-11	multi-exon	FALSE	canonical	0	0	junction_2	53	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGAAGTATCCAGCTT	7912	False	NA	NA	False	ATTAAA	-17	NA	115830301	115824663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115826694_115827578_115827801_115830097
ES.29281.4	chr6	-	3643	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_7	37.2010533096435	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTTGGCATTGTG	7895	False	NA	NA	False	AATAAA	-19	NA	115830318	115817659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830052
ES.29281.6	chr6	-	4004	9	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	11	-3	intron_retention	FALSE	canonical	1	1	junction_2	44.9833302457699	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTCCCTTTGGCATTGT	7898	False	NA	NA	False	AATAAA	-18	NA	115830315	115817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821184_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115825931_115826028_115826694_115827578_115827801_115829645
ES.29281.7	chr6	-	3297	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	66	-3	intron_retention	FALSE	canonical	0	0	junction_5	48.3482266521551	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTCCCTTTGGCATTGT	8030	False	NA	NA	False	AATAAA	-18	NA	115830183	115817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822576_115826028_115826694_115827578_115827801_115830097
ES.29281.8	chr6	-	3561	8	NNC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	31	-9	intron_retention	TRUE	non_canonical	0	0	junction_5	48.3482266521551	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTAAGGTCCCTTTGG	7918	False	NA	NA	False	AATAAA	-12	NA	115830295	115817666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825873_115826694_115827578_115827801_115830097
ES.29282.1	chr6	+	3908	29	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0080430378082	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830432	115903656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830463_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.10	chr6	+	3730	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	105	287	-5	82	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGCCCAGATGAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	115830535	115903373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.12	chr6	+	4105	30	NNC	ENSMUSG00000030323.14	novel	3765	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.082255640195	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830545	115903656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115850255_115850358_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.13	chr6	+	2516	1	FSM	ENSMUSG00000030323.14	ENSMUST00000203243.2	2491	1	-1	-24	-1	24	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACACCATGTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	115830547	115833063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115830500_115833100
ES.29282.14	chr6	+	4322	28	ISM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	117	1	-1	-1	intron_retention	FALSE	canonical	3	30	junction_5	9.75628951934008	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCGTTTTAGCAAAT	NA	False	NA	9	True	AATAAA	-21	NA	115830547	115903659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713
ES.29282.15	chr6	+	3845	28	NIC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	12.8143866338228	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGTTTTAGCAAATCCT	NA	False	NA	12	True	AATAAA	-24	NA	115830547	115903662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.16	chr6	+	5562	26	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_22	13.6846775628803	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGTTTTAGCAAATCCT	NA	False	NA	12	True	AATAAA	-24	NA	115830548	115903662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897314_115897413_115900226_115900393_115900836_115902879_115903196
ES.29282.17	chr6	+	4025	29	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	13.0091706272215	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGTTTTAGCAAATCCT	NA	False	NA	12	True	AATAAA	-24	NA	115830548	115903662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901288_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.18	chr6	+	3932	29	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	12.6448243021662	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	False	NA	5	True	AATAAA	-17	NA	115830552	115903655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882818_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.19	chr6	+	4195	18	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	5	8658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	15.0723744177298	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGACATGTTTATGTG	NA	False	NA	NA	False	AATAAA	-16	NA	115830553	115885238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115883023_115883255
ES.29282.2	chr6	+	2496	16	ISM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	-24	23315	-24	3756	5prime_fragment	FALSE	canonical	3	30	junction_5	10.6512388429182	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATGGCCTACTAAGG	NA	False	NA	NA	False	AATAAA	-17	NA	115830466	115880336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818
ES.29282.20	chr6	+	3923	28	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.2031510703912	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	False	NA	5	True	AATAAA	-17	NA	115830553	115903655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865685_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.21	chr6	+	3734	23	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	20	-7058	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	14.4888101593854	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGAGAGGGACACAG	NA	False	NA	NA	False	NA	NA	NA	115830568	115896233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115895269
ES.29282.23	chr6	+	2970	12	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	-4307	8047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	18.0156038886037	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGAGTGTGACTGAAT	4954	False	NA	NA	False	AAAAAG	-4	NA	115858561	115884627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115883024_115883254
ES.29282.25	chr6	+	2677	3	NNC	ENSMUSG00000030323.14	novel	618	3	NA	NA	-196	981	intron_retention	TRUE	non_canonical	0	0	junction_2	18.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAAGGCAGTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	115863904	115866774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115864062_115864187_115866414_115866480
ES.29282.26	chr6	+	5064	3	NNC	ENSMUSG00000030323.14	novel	338	2	NA	NA	79	4910	intron_retention	TRUE	non_canonical	0	0	junction_2	30	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-43	NA	115864179	115870703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115864327_115865681_115866335_115866439
ES.29282.27	chr6	+	3099	20	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	80	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.9494536673566	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGCGTTTTAGCAAA	NA	False	NA	8	True	AATAAA	-20	NA	115864180	115903658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900834_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.28	chr6	+	3030	20	NNC	ENSMUSG00000030323.14	novel	4122	29	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.6969576256717	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTGTCTGCGTTTTAG	NA	False	NA	4	True	AATAAA	-16	NA	115864180	115903654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882818_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.29	chr6	+	5077	3	NNC	ENSMUSG00000030323.14	novel	338	2	NA	NA	81	4910	intron_retention	TRUE	non_canonical	0	0	junction_2	30	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-43	NA	115864181	115870703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115864327_115865681_115866319_115866408
ES.29282.3	chr6	+	4486	17	ISM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	9	18409	9	8662	5prime_fragment	FALSE	canonical	3	30	junction_5	11.1460475057305	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATGTTTATGTGGTGA	NA	False	NA	NA	False	AATAAA	-20	NA	115830499	115885242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755
ES.29282.30	chr6	+	4611	17	ISM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	33751	5	81	0	intron_retention	FALSE	canonical	3	40	junction_3	8.23103881657716	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	False	NA	5	True	AATAAA	-17	NA	115864181	115903655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307
ES.29282.33	chr6	+	2611	17	ISM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	38330	0	-2116	0	3prime_fragment	FALSE	canonical	2	3	junction_9	14.0855366866158	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCAGTGTCTGCGTTT	NA	False	NA	1	True	AATAAA	-13	NA	115868820	115903651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.34	chr6	+	2052	2	NNC	ENSMUSG00000030323.14	novel	4267	13	NA	NA	2724	8015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	115882311	115884595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_115883023_115883254
ES.29282.5	chr6	+	4034	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	88	0	-22	0	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCGTTTTAGCAAATC	NA	False	NA	10	True	AATAAA	-22	NA	115830518	115903660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.6	chr6	+	3997	18	ISM	ENSMUSG00000030323.14	ENSMUST00000112923.7	3765	30	-77	18696	-22	8015	5prime_fragment	FALSE	canonical	1	1	junction_7	17.1540950148513	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	115830518	115884595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755
ES.29282.7	chr6	+	4205	30	NIC	ENSMUSG00000030323.14	novel	3765	30	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	16.3185442683849	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	False	NA	5	True	AATAAA	-17	NA	115830522	115903655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29282.9	chr6	+	4247	30	NIC	ENSMUSG00000030323.14	novel	3765	30	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	15.004636619896	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTGCGTTTTAGCA	NA	False	NA	6	True	AATAAA	-18	NA	115830534	115903656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_115830671_115838964_115839198_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ES.29283.1	chr6	-	174	1	Intergenic	novelGene_24290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGGAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	115838853	115838679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115838700_115838900
ES.29284.1	chr6	-	7262	35	NIC	ENSMUSG00000030123.16	novel	6907	36	NA	NA	47	-2	intron_retention	FALSE	canonical	1	1	junction_1	1.86874678136766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGGCTTTAGCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	115971919	115931773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115932818_115932965_115933041_115933555_115933697_115934486_115934635_115935487_115935652_115935949_115936055_115936270_115936306_115936737_115936802_115936878_115937544_115937676_115937824_115939301_115939501_115939655_115939787_115940191_115940297_115940851_115940965_115941036_115941145_115942817_115942933_115943454_115943605_115943697_115943956_115944145_115944237_115944317_115944486_115944709_115944850_115944931_115945032_115945628_115945781_115946268_115946424_115946836_115946931_115947119_115947210_115949432_115949538_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ES.29284.2	chr6	-	7000	34	NIC	ENSMUSG00000030123.16	novel	6907	36	NA	NA	59	-2	intron_retention	FALSE	canonical	1	1	junction_1	1.79121414619778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGGCTTTAGCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	115971907	115931773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_115932818_115932965_115933041_115933555_115933697_115934486_115934635_115935487_115935652_115935949_115936055_115936270_115936306_115936737_115936802_115936878_115936983_115937386_115937544_115937676_115937824_115939301_115939501_115939655_115939787_115940191_115940297_115940851_115941145_115942817_115942933_115943454_115943605_115943697_115943956_115944145_115944237_115944317_115944486_115944709_115945032_115945628_115945781_115946268_115946424_115946836_115946931_115947119_115947210_115949432_115949538_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ES.29284.3	chr6	-	6772	36	FSM	ENSMUSG00000030123.16	ENSMUST00000015511.15	6907	36	133	2	133	-2	multi-exon	TRUE	canonical	1	1	junction_1	1.84191559557557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGGGCTTTAGCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	115971833	115931773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115932818_115932965_115933041_115933555_115933697_115934486_115934635_115935487_115935652_115935949_115936055_115936270_115936306_115936737_115936802_115936878_115936983_115937386_115937544_115937676_115937824_115939301_115939501_115939655_115939787_115940191_115940297_115940851_115940965_115941036_115941145_115942817_115942933_115943454_115943605_115943697_115943956_115944145_115944237_115944317_115944486_115944709_115944850_115944931_115945032_115945628_115945781_115946268_115946424_115946836_115946931_115947119_115947210_115949432_115949538_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ES.29284.4	chr6	-	6637	36	FSM	ENSMUSG00000030123.16	ENSMUST00000015511.15	6907	36	46	224	46	-224	multi-exon	FALSE	canonical	1	1	junction_1	1.84191559557557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAATAGCTGCCGCT	NA	False	NA	NA	False	ATTAAA	-18	NA	115971920	115931995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115932818_115932965_115933041_115933555_115933697_115934486_115934635_115935487_115935652_115935949_115936055_115936270_115936306_115936737_115936802_115936878_115936983_115937386_115937544_115937676_115937824_115939301_115939501_115939655_115939787_115940191_115940297_115940851_115940965_115941036_115941145_115942817_115942933_115943454_115943605_115943697_115943956_115944145_115944237_115944317_115944486_115944709_115944850_115944931_115945032_115945628_115945781_115946268_115946424_115946836_115946931_115947119_115947210_115949432_115949538_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ES.29284.5	chr6	-	2580	9	NNC	ENSMUSG00000030123.16	novel	6907	36	NA	NA	124	-8516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCATGGCTCTGTTCC	NA	False	NA	NA	False	AATATA	-13	NA	115971842	115952439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115952697_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ES.29285.1	chr6	+	171	1	Intergenic	novelGene_24291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTGACATG	NA	False	NA	NA	False	NA	NA	NA	115977204	115977375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_115977200_115977400
ES.29286.1	chr6	-	172	1	Intergenic	novelGene_24292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAAATCC	9068	False	NA	NA	False	NA	NA	NA	115985913	115985741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_115985700_115985900
ES.29287.1	chr6	+	3209	1	NIC	ENSMUSG00000092625.3	novel	621	4	NA	NA	2145	-14490	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATAATTTACTCCTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	116086755	116089964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116086800_116090000
ES.29288.1	chr6	+	169	1	Intergenic	novelGene_24295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	116112087	116112256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_116112100_116112300
ES.29289.1	chr6	+	211	1	Intergenic	novelGene_24296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTTAATCAAATAGTCC	7743	False	NA	NA	False	NA	NA	NA	116145180	116145391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_116145200_116145400
ES.2929.1	chr10	-	3464	18	FSM	ENSMUSG00000020080.9	ENSMUST00000020277.9	3517	18	51	2	-32	-2	multi-exon	TRUE	canonical	1	1	junction_6	3.69231878270005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGAGGTATTAAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	62258219	62218917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62219702_62221456_62221691_62227089_62227246_62229465_62229650_62230933_62231034_62231176_62231273_62234363_62234484_62234568_62234709_62235970_62236276_62237502_62237737_62239270_62239427_62241203_62241388_62244393_62244494_62245568_62245665_62247285_62247406_62247484_62247634_62253553_62253717_62258076
ES.2929.4	chr10	-	3403	17	NNC	ENSMUSG00000020080.9	novel	3517	18	NA	NA	-294	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.9350190596743	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCTTGAGGTATTAAGC	NA	False	NA	NA	False	AATAAA	-18	NA	62247877	62218919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62219702_62221456_62221691_62227089_62227246_62229465_62229650_62230933_62231034_62231176_62231273_62234363_62234484_62234568_62234709_62235970_62236205_62237169_62237244_62237502_62237737_62239270_62239427_62241203_62241388_62244393_62244494_62245568_62245665_62247285_62247406_62247484
ES.2929.5	chr10	-	4765	15	NIC	ENSMUSG00000020080.9	novel	3517	18	NA	NA	4450	-6	intron_retention	FALSE	canonical	1	1	junction_4	3.95381500088516	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAACCTTGAGGTATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	62253737	62218921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62219702_62221456_62221691_62227089_62227246_62229465_62231273_62234363_62234484_62234568_62234709_62235970_62236276_62237502_62237737_62239270_62239427_62241203_62241388_62244393_62244494_62245568_62245665_62247285_62247406_62247484_62247634_62253553
ES.2929.6	chr10	-	309	1	Intergenic	novelGene_2250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2189	False	NA	NA	False	NA	NA	NA	62229061	62228752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62228800_62229100
ES.2929.7	chr10	-	157	1	Intergenic	novelGene_2251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	2187	False	NA	NA	False	NA	NA	NA	62229063	62228906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62228900_62229100
ES.29290.1	chr6	+	882	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-104	-391	-104	391	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150593	116151475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116150600_116151500
ES.29291.1	chr6	-	5857	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-22	3	-22	-3	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCAGCTTTGTTTTGGT	NA	False	NA	-2	True	AATAAA	-25	NA	116170469	115995574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
ES.29291.10	chr6	-	1192	1	FSM	ENSMUSG00000030126.18	ENSMUST00000204637.2	1603	1	437	-26	-255	26	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAACAGAAAAGAATTCAG	NA	False	NA	NA	False	NA	NA	NA	116111646	116110454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116110500_116111600
ES.29291.11	chr6	-	189	1	FSM	ENSMUSG00000030126.18	ENSMUST00000204574.2	2697	1	1292	1216	1292	-1216	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATTCCTCTATCG	NA	False	NA	NA	False	NA	NA	NA	116149982	116149793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116149800_116150000
ES.29291.3	chr6	-	3341	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-55	2552	-55	7	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGTGGATATTTCAGCG	NA	False	NA	NA	False	AATAAA	-22	NA	116170502	115998123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
ES.29291.5	chr6	-	3145	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-32	2725	-32	8	multi-exon	FALSE	canonical	2	10	junction_4	4.84148737476408	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGTGCTTCCTTATAA	NA	False	NA	3	True	AATAAA	-39	NA	116170479	115998296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
ES.29291.6	chr6	-	2905	7	NNC	ENSMUSG00000030126.18	novel	5838	6	NA	NA	-39	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.70681318570736	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAGAATGTAATACT	NA	False	NA	-21	True	AATAAA	-15	NA	116170486	115998320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_115999363_116001762_116001899_116019831_116020767_116084272_116084478_116110727_116110991_116115155_116115212_116170218
ES.29291.7	chr6	-	3374	4	ISM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	-32	22829	-32	2328	5prime_fragment	FALSE	canonical	2	10	junction_2	4.49691252107735	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	116170479	116018400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_116020767_116110727_116111419_116115155_116115212_116170218
ES.29291.8	chr6	-	176	1	Intergenic	novelGene_24293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116036424	116036248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_116036200_116036400
ES.29291.9	chr6	-	181	1	Intergenic	novelGene_24294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAATGTAAAA	9469	False	NA	NA	False	NA	NA	NA	116047419	116047238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_116047200_116047400
ES.29292.1	chr6	-	5630	1	NIC	ENSMUSG00000108030.2	novel	787	4	NA	NA	2954	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTAGTGTCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116182000	116176370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_116176400_116182000
ES.29293.10	chr6	+	4203	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	95.774643835947	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185000	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195624_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.100	chr6	+	4882	28	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-44	1	intron_retention	FALSE	canonical	3	210	junction_24	44.4363264190926	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185432	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.101	chr6	+	4515	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-44	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	95.0442096380115	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116185432	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198756_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.102	chr6	+	4122	29	NNC	ENSMUSG00000024104.12	novel	3728	27	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	82.5380555395201	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185439	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185551_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.103	chr6	+	4772	30	NNC	ENSMUSG00000024104.12	novel	3728	27	NA	NA	-36	568	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	76.6024529027976	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGAGTGCTGTGAGTGA	NA	False	NA	NA	False	AATAAA	-29	NA	116185440	116240215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185551_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.104	chr6	+	4475	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	78.3756652154174	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185531	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198756_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.106	chr6	+	4023	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	512	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	78.4020577093562	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185988	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231352_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.107	chr6	+	6130	24	NIC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	5457	1	intron_retention	FALSE	canonical	3	196	junction_20	47.6962664936063	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116190933	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.108	chr6	+	3882	28	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5457	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	79.9417998172714	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116190933	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231460_116232016_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.11	chr6	+	4210	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_8	80.5242631509581	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTCTTACTTAATAAG	NA	False	NA	17	True	AATAAA	-20	NA	116185006	116239633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197509_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.110	chr6	+	3467	26	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-2767	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	78.832642984997	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116194747	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235767_116236218_116237451_116237630_116239295
ES.29293.111	chr6	+	3479	24	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-601	2	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	90.5492586494554	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116196913	116239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116196962_116197509_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.112	chr6	+	6285	17	NIC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	-416	1	intron_retention	FALSE	canonical	3	278	junction_5	41.8501325416061	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116198423	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116198859_116200156_116200214_116201381_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.113	chr6	+	6490	16	NIC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	676	0	intron_retention	FALSE	canonical	3	278	junction_4	41.5186169754672	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116199515	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116200214_116201381_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.114	chr6	+	6331	18	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	1313	0	intron_retention	FALSE	canonical	3	278	junction_5	40.0814913838931	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116200152	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451
ES.29293.115	chr6	+	3115	19	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-998	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	92.0763907220253	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTCTTACTTAATAAG	NA	False	NA	17	True	AATAAA	-20	NA	116201934	116239633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232007_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.116	chr6	+	3250	18	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	450	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	90.6474214597472	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116203382	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233472_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.117	chr6	+	2802	14	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5372	1	combination_of_known_splicesites	FALSE	canonical	3	101	junction_10	74.8748067536106	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	113	False	NA	11	True	AATAAA	-14	NA	116208304	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.118	chr6	+	182	1	Intergenic	novelGene_24299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	498	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	5379	False	NA	NA	False	NA	NA	NA	116213869	116214051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_116213900_116214100
ES.29293.119	chr6	+	2362	12	NNC	ENSMUSG00000024104.12	novel	599	2	NA	NA	12480	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	123.447650095292	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	6922	False	NA	10	True	AATAAA	-13	NA	116215412	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116215493_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.120	chr6	+	2346	12	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	33407	22	-14361	-1	3prime_fragment	FALSE	canonical	3	196	junction_8	68.271456228333	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	9915	False	NA	9	True	AATAAA	-12	NA	116218405	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.121	chr6	+	3688	10	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-14343	1	intron_retention	FALSE	canonical	3	97	junction_9	88.590192584858	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	9933	False	NA	11	True	AATAAA	-14	NA	116218423	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.122	chr6	+	1857	8	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-7832	5	combination_of_known_splicesites	FALSE	canonical	3	101	junction_4	99.1210350623758	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGTTCTTACTTAATA	NA	False	NA	15	True	AATAAA	-18	NA	116224934	116239631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.123	chr6	+	4934	5	NNC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	-2832	0	intron_retention	FALSE	non_canonical	0	0	junction_1	173.629454586484	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	2961	False	NA	10	True	AATAAA	-13	NA	116229934	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116231178_116231222_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.124	chr6	+	5629	4	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-2007	3	intron_retention	FALSE	canonical	3	339	junction_1	34.0293990543471	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	3786	False	NA	13	True	AATAAA	-16	NA	116230759	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116231180_116231373_116233790_116235602_116236218_116237451
ES.29293.125	chr6	+	3708	5	NNC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	-1603	3	intron_retention	FALSE	non_canonical	0	0	junction_1	173.629454586484	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	4190	False	NA	13	True	AATAAA	-16	NA	116231163	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116231176_116231220_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.126	chr6	+	5252	3	NIC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	-1441	-2	intron_retention	FALSE	canonical	3	408	junction_1	3	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	4352	False	NA	8	True	AATAAA	-11	NA	116231325	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116233790_116235602_116236218_116237451
ES.29293.127	chr6	+	5349	2	FSM	ENSMUSG00000024104.12	ENSMUST00000203980.2	599	2	-1052	-3698	-302	0	multi-exon	FALSE	canonical	3	408	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	5491	False	NA	10	True	AATAAA	-13	NA	116232464	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116233790_116235602
ES.29293.128	chr6	+	3247	2	ISM	ENSMUSG00000024104.12	ENSMUST00000203802.3	4946	28	49983	-4	1633	4	intron_retention	FALSE	canonical	3	414	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	8176	False	NA	14	True	AATAAA	-17	NA	116235149	116239630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116236218_116237451
ES.29293.15	chr6	+	4289	32	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.536099247034	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185008	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116192061_116192113_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.16	chr6	+	5681	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	0	intron_retention	FALSE	canonical	3	253	junction_1	40.3573798981661	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185008	116239647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.17	chr6	+	5889	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	2	intron_retention	FALSE	canonical	3	10	junction_2	75.7849653255034	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185008	116239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185289_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.18	chr6	+	4358	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	3	4	intron_retention	FALSE	canonical	3	196	junction_26	50.0417661468529	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	NA	False	NA	14	True	AATAAA	-17	NA	116185009	116239630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.2	chr6	+	4852	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	1	intron_retention	TRUE	canonical	2	7	junction_6	77.9892214876651	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116184985	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195624_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.20	chr6	+	4344	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5	-19	intron_retention	FALSE	canonical	0	0	junction_6	78.0930723107056	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116185011	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195695_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.22	chr6	+	4183	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	94.0258648353003	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185011	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197509_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.23	chr6	+	3997	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_26	71.6795145499915	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185014	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116235602_116236218_116237451_116237630_116239295
ES.29293.24	chr6	+	4231	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_26	73.9005337523951	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185014	116239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.25	chr6	+	3987	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	94.6997066456677	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185018	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.26	chr6	+	4257	32	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	117.470221169463	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTACAAATAAAAAATA	NA	False	NA	-17	True	NA	NA	NA	116185018	116239599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215493_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231457_116232009_116232089_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.27	chr6	+	4898	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	2	-2	intron_retention	FALSE	canonical	3	196	junction_25	50.9267681508037	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185018	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.28	chr6	+	4141	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	4	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	72.8351452451186	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116185020	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.3	chr6	+	4335	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	101	junction_25	57.5563942616992	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAGAGTGCATGGAAGC	NA	False	NA	30	True	AATAAA	-33	NA	116184985	116239646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.30	chr6	+	4791	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	11	5	intron_retention	FALSE	canonical	3	97	junction_29	65.7060618483161	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGTTCTTACTTAATA	NA	False	NA	15	True	AATAAA	-18	NA	116185027	116239631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.32	chr6	+	4087	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_24	91.8141423457948	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185030	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.34	chr6	+	4167	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	18	6	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_29	70.9425920545601	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGTTCTTACTTAATAA	NA	False	NA	16	True	AATAAA	-19	NA	116185034	116239632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.35	chr6	+	4083	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	84.846469987783	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185034	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.37	chr6	+	4129	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-18	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	76.4240781077891	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116185037	116239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.38	chr6	+	6381	27	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-18	3	intron_retention	FALSE	canonical	3	10	junction_2	74.7414478296256	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185037	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185289_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.4	chr6	+	4247	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	-10	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTACTTAATAAGAGTG	NA	False	NA	21	True	AATAAA	-24	NA	116184985	116239637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.42	chr6	+	5646	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-15	7	intron_retention	FALSE	canonical	0	0	junction_7	74.1187942647835	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTCTTACTTAATAAG	NA	False	NA	17	True	AATAAA	-20	NA	116185040	116239633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195695_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.43	chr6	+	4232	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_8	74.7083886409909	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185040	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197509_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.44	chr6	+	5634	32	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-14	3	intron_retention	TRUE	non_canonical	0	0	junction_20	106.177535734698	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116185041	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215646_116216561_116216682_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.46	chr6	+	4027	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	87.4018559488618	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185042	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.47	chr6	+	5008	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_9	79.6183818894473	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185045	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198756_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.48	chr6	+	6503	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-7	1	intron_retention	TRUE	non_canonical	0	0	junction_20	107.952526228634	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185048	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215709_116216627_116216682_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.5	chr6	+	6232	28	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-4	3	intron_retention	FALSE	canonical	3	253	junction_1	41.0870800635449	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTTCTTACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	116184994	116239629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.51	chr6	+	3900	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	79.6782432598736	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185049	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.52	chr6	+	4048	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	95.7460349594892	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	NA	False	NA	14	True	AATAAA	-17	NA	116185049	116239630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235604_116236218_116237451_116237630_116239295
ES.29293.54	chr6	+	4132	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	78.9969821365508	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185050	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.55	chr6	+	4191	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_24	82.8725939331459	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185050	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231352_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.57	chr6	+	6145	28	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	97	junction_27	60.1098674023	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185050	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.58	chr6	+	4556	33	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	117.171611422893	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185051	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196916_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215689_116216606_116216682_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.59	chr6	+	7838	27	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	1	intron_retention	FALSE	canonical	3	253	junction_1	41.0197672077152	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185052	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451
ES.29293.6	chr6	+	4262	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_30	64.6488721221544	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116184997	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.60	chr6	+	6113	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	1	intron_retention	FALSE	canonical	2	3	junction_19	92.1909827256352	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185052	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215493_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.61	chr6	+	4211	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.1090497643147	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185052	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185269_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.64	chr6	+	3928	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_26	81.8890099401598	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185052	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116235602_116236218_116237451_116237630_116239321
ES.29293.66	chr6	+	4261	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	99.6616553924104	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185053	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116193367_116193461_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.7	chr6	+	4265	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_29	98.6050990342566	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116184998	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116238773_116238816_116239295
ES.29293.70	chr6	+	4524	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_26	74.3684787406744	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185060	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233472_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.71	chr6	+	4444	32	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	94.138881617842	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185060	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116188999_116189220_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.72	chr6	+	5428	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_22	93.5259636002054	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185063	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185289_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223126_116225015_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.74	chr6	+	4165	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	12	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	78.7391726697897	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGTTCTTACTTAATA	NA	False	NA	15	True	AATAAA	-18	NA	116185067	116239631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.75	chr6	+	3941	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.67888551283	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185070	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201938_116201995_116203384_116203448_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.77	chr6	+	4435	32	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_19	119.140601099646	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185082	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116215435_116215689_116216606_116216682_116218407_116218584_116221550_116221654_116223068_116223126_116225015_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.78	chr6	+	6227	27	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	7	intron_retention	FALSE	canonical	3	278	junction_14	38.5294016680691	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTCTTACTTAATAAG	NA	False	NA	17	True	AATAAA	-20	NA	116185082	116239633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.79	chr6	+	4254	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	-1	intron_retention	FALSE	canonical	3	97	junction_29	64.6440358224929	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185082	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.8	chr6	+	4143	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_24	83.5026579071051	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGTTTGTTCTTACTTA	NA	False	NA	12	True	AATAAA	-15	NA	116184999	116239628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.80	chr6	+	4212	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	3	2	intron_retention	FALSE	canonical	3	97	junction_28	71.1378637805867	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGTGCATGGAAGCTCA	NA	False	NA	33	True	AATAAA	-36	NA	116185085	116239649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239321
ES.29293.82	chr6	+	4134	28	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	7	4	combination_of_known_splicesites	FALSE	canonical	3	9	junction_23	84.1663712662379	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTTCTTACTTAAT	NA	False	NA	14	True	AATAAA	-17	NA	116185089	116239630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.83	chr6	+	4179	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.5810726270547	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185109	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185216_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.84	chr6	+	4232	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	76.8778390715371	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGGTTTGTTCTTA	NA	False	NA	8	True	AATAAA	-11	NA	116185114	116239624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201951_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.88	chr6	+	4002	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-13	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	79.1332188561202	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116185153	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.89	chr6	+	6347	28	NNC	ENSMUSG00000024104.12	novel	4946	28	NA	NA	-12	0	intron_retention	TRUE	canonical	0	0	junction_3	110.382214129628	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185154	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185291_116185914_116186080_116190908_116190972_116192061_116192113_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231184_116231229_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.9	chr6	+	4308	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	1	-2	1	2	multi-exon	FALSE	canonical	3	196	junction_27	51.0355975983648	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGTGCATGGAAGCTCA	NA	False	NA	33	True	AATAAA	-36	NA	116184999	116239649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.90	chr6	+	4154	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.550169494932	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185154	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185289_116185914_116186080_116190908_116190972_116192061_116192113_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.93	chr6	+	4617	28	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	124	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.9816247385861	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATAAACGCTTC	NA	False	NA	-9	True	NA	NA	NA	116185290	116239607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196911_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.94	chr6	+	4649	29	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	341	20	-137	1	3prime_fragment	FALSE	canonical	3	196	junction_25	50.4156701425099	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTTTGTTCTTACTT	NA	False	NA	11	True	AATAAA	-14	NA	116185339	116239627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.96	chr6	+	6524	26	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-69	5	intron_retention	FALSE	canonical	3	278	junction_13	38.8797942381387	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGTTCTTACTTAATA	NA	False	NA	15	True	AATAAA	-18	NA	116185407	116239631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.97	chr6	+	4402	29	NNC	ENSMUSG00000024104.12	novel	3728	27	NA	NA	-68	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.4805595724574	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGGTTTGTTCTTAC	NA	False	NA	9	True	AATAAA	-12	NA	116185408	116239625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116185802_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.98	chr6	+	4519	29	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_24	74.939729184219	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185427	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232089_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29293.99	chr6	+	4604	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.0087923836638	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGTTTGTTCTTACT	NA	False	NA	10	True	AATAAA	-13	NA	116185430	116239626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116186080_116190908_116190972_116192061_116192109_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ES.29294.1	chr6	-	1911	1	Genic_Genomic	ENSMUSG00000108030.2	novel	NA	NA	NA	NA	-44	-6719	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTAGGGTCAGAACTAGAA	8465	False	NA	NA	False	NA	NA	NA	116184998	116183087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_116183100_116185000
ES.29295.1	chr6	-	2383	1	Intergenic	novelGene_24297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCGCCCCCCCCCAAT	4063	False	NA	NA	False	NA	NA	NA	116189400	116187017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_116187000_116189400
ES.29296.1	chr6	-	176	1	Intergenic	novelGene_24298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCTAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	116200600	116200424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_116200400_116200600
ES.29297.1	chr6	-	5788	8	Antisense	novelGene_ENSMUSG00000024104.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCCCTTCTCTGAGGCA	NA	False	NA	NA	False	NA	NA	NA	116224019	116203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_116203446_116204304_116204495_116206182_116206310_116208499_116208588_116213055_116213158_116215095_116215676_116216593_116218582_116221548
ES.29297.2	chr6	-	3925	4	Antisense	novelGene_ENSMUSG00000024104.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCCCTTCTCTGAGGCA	NA	False	NA	NA	False	NA	NA	NA	116211865	116203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_116203446_116204304_116204495_116206182_116206310_116208499
ES.29298.1	chr6	+	703	2	ISM	ENSMUSG00000042213.18	ENSMUST00000220845.2	1163	7	-47	31710	-24	-31710	5prime_fragment	FALSE	canonical	3	17	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTTTTTTGGAAGG	NA	False	NA	NA	False	AATAAA	-7	NA	116241158	116251121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116241274_116250533
ES.29298.10	chr6	+	3120	10	NIC	ENSMUSG00000042213.18	novel	2790	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.2068331172711	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACTTTATTTGATTA	NA	False	NA	NA	False	AATAAA	-12	NA	116243493	116307259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116243542_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ES.29298.11	chr6	+	707	4	ISM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	9471	41894	155	-17465	internal_fragment	FALSE	canonical	2	5	junction_3	1.69967317119759	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTTTGTTTCCATT	NA	False	NA	NA	False	TATAAA	-33	NA	116250694	116265366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116250834_116261700_116261777_116262814_116262883_116264942
ES.29298.12	chr6	+	4365	2	NNC	ENSMUSG00000042213.18	novel	889	3	NA	NA	13060	2417	intron_retention	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACGTGTGTATTCTTA	NA	False	NA	NA	False	AATACA	-17	NA	116305088	116309680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116308767_116308993
ES.29298.2	chr6	+	4051	2	ISM	ENSMUSG00000042213.18	ENSMUST00000220845.2	1163	7	-46	28361	-23	-28361	intron_retention	FALSE	canonical	3	17	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGTGTAGTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	116241159	116254470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116241274_116250533
ES.29298.3	chr6	+	2840	7	NIC	ENSMUSG00000042213.18	novel	3087	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	5.31245915016974	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACTTTATTTGATTA	NA	False	NA	NA	False	AATAAA	-12	NA	116241174	116307259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116241274_116250533_116250834_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ES.29298.4	chr6	+	4166	1	Genic_Genomic	ENSMUSG00000042213.18	novel	NA	NA	NA	NA	-8	-37491	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAACAAGAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	116241174	116245340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_116241200_116245300
ES.29298.5	chr6	+	3092	9	FSM	ENSMUSG00000042213.18	ENSMUST00000222819.2	3087	9	-7	2	-7	-2	multi-exon	FALSE	canonical	1	1	junction_2	6.0917464655056	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATGACTTTATTTGAT	NA	False	NA	NA	False	AATAAA	-10	NA	116241175	116307257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116241274_116250533_116250834_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ES.29298.6	chr6	+	3164	10	FSM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	-42	1	-1	0	multi-exon	FALSE	canonical	2	5	junction_4	4.89393678789894	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACTTTATTTGATTA	NA	False	NA	NA	False	AATAAA	-12	NA	116241181	116307259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ES.29298.7	chr6	+	2538	7	NIC	ENSMUSG00000042213.18	novel	3087	9	NA	NA	8	-720	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	6.87992248018343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTCATGTGTTTTAAG	NA	False	NA	NA	False	CATAAA	-15	NA	116241213	116305785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116241274_116250533_116250834_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167
ES.29298.8	chr6	+	3475	10	NNC	ENSMUSG00000042213.18	novel	374	4	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.04302476351565	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACTTTATTTGATTA	NA	False	NA	NA	False	AATAAA	-12	NA	116241303	116307259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116241707_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ES.29298.9	chr6	+	4198	2	NNC	ENSMUSG00000042213.18	novel	708	3	NA	NA	183	-28398	intron_retention	FALSE	canonical	1	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGCAAAAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116241408	116254433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116241707_116250533
ES.29299.1	chr6	+	4480	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	-30	0	-30	0	multi-exon	FALSE	canonical	2	9	junction_1	11.0564414690796	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314954	116386501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.10	chr6	+	6874	5	NIC	ENSMUSG00000025702.16	novel	780	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	8	junction_1	13.2169398878863	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTGTGATGAGAGTG	NA	False	NA	6	True	AATAAA	-16	NA	116314990	116386497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116380562_116382595
ES.29299.11	chr6	+	4574	6	FSM	ENSMUSG00000025702.16	ENSMUST00000204657.3	780	6	-14	-3780	-3	-5	multi-exon	FALSE	canonical	3	8	junction_1	11.9733036376766	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATTTTGTGATGAGA	NA	False	NA	3	True	AATAAA	-13	NA	116314990	116386494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595
ES.29299.12	chr6	+	5456	8	NIC	ENSMUSG00000025702.16	novel	2102	9	NA	NA	-3	-2	intron_retention	TRUE	canonical	1	1	junction_4	16.4465739872585	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTGTGATGAGAGTG	NA	False	NA	6	True	AATAAA	-16	NA	116314990	116386497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116378297_116379144_116380380_116380562_116382595_116382744_116382985
ES.29299.13	chr6	+	3035	8	NNC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.8634274655321	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116315001	116386501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116315177_116315346_116315452_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985_116383393_116384619
ES.29299.14	chr6	+	6880	6	NIC	ENSMUSG00000025702.16	novel	4611	7	NA	NA	1	-5	intron_retention	FALSE	canonical	3	24	junction_1	7.98498591107085	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATTTTGTGATGAGA	NA	False	NA	3	True	AATAAA	-13	NA	116315014	116386494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116380562_116382595_116382744_116382985
ES.29299.15	chr6	+	3477	1	FSM	ENSMUSG00000025702.16	ENSMUST00000205066.2	3107	1	-350	-20	-350	20	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGTTAGTTAGTAACCC	NA	False	NA	NA	False	NA	NA	NA	116326995	116330472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116327000_116330500
ES.29299.16	chr6	+	4154	6	ISM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	38657	2	-3	0	3prime_fragment	FALSE	canonical	3	29	junction_2	6.32455532033676	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATGAGAGTGTT	2731	False	NA	8	True	AATAAA	-18	NA	116353650	116386499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.17	chr6	+	4272	7	NNC	ENSMUSG00000025702.16	novel	2102	9	NA	NA	81	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.9876500843094	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTAGTGTAGTTTCTA	2815	False	NA	16	True	AATAAA	-18	NA	116353734	116386292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116353825_116369484_116369536_116377997_116378084_116378734_116379144_116380380_116380562_116382595_116382744_116382985
ES.29299.18	chr6	+	3518	1	Intergenic	novelGene_24301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAGCCTTTA	3581	False	NA	NA	False	NA	NA	NA	116358450	116361968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_116358400_116362000
ES.29299.19	chr6	+	4175	1	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	185	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTGTGATGAGAGTG	NA	False	NA	6	True	AATAAA	-16	NA	116382322	116386497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116382300_116386500
ES.29299.2	chr6	+	4650	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	-39	0	-30	0	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314954	116386501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.3	chr6	+	4373	7	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	11.9256958799989	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314956	116386501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.4	chr6	+	5426	7	NIC	ENSMUSG00000025702.16	novel	2102	9	NA	NA	-25	-2	intron_retention	FALSE	canonical	1	1	junction_4	16.3299316185545	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTTGTGATGAGAGTG	NA	False	NA	6	True	AATAAA	-16	NA	116314959	116386497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116379144_116380380_116380562_116382595_116382744_116382985
ES.29299.5	chr6	+	4189	6	NIC	ENSMUSG00000025702.16	novel	4245	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.992498241363	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATGAGAGTGTT	NA	False	NA	8	True	AATAAA	-18	NA	116314967	116386499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315177_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.6	chr6	+	4412	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	-14	213	-5	-211	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGTAGTGTAGTT	NA	False	NA	12	True	AATAAA	-14	NA	116314979	116386288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.7	chr6	+	4238	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	-3	215	-3	-213	multi-exon	FALSE	canonical	2	9	junction_1	11.0564414690796	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGTGTGTAGTGTAG	NA	False	NA	10	True	AATAAA	-12	NA	116314981	116386286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.8	chr6	+	4130	7	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	-2	-215	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	11.9256958799989	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGGTGTGTGTAGTGT	NA	False	NA	8	True	AATAAA	-10	NA	116314982	116386284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ES.29299.9	chr6	+	2483	6	NNC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.0764233115604	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATGAGAGTGTT	NA	False	NA	8	True	AATAAA	-18	NA	116314986	116386499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116384619
ES.293.1	chr1	-	3269	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	-18	-3	-18	3	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTAAATATAGCCGGGG	NA	False	NA	NA	False	AATAAA	-17	NA	36749107	36737191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.10	chr1	-	3087	11	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	164.608292622213	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTATGAGTAAATATAGC	NA	False	NA	NA	False	AATAAA	-12	NA	36749149	36737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36749105
ES.293.11	chr1	-	3299	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-22	-2	intron_retention	FALSE	canonical	1	1	junction_8	179.851848753356	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTATGAGTAAATATAGC	NA	False	NA	NA	False	AATAAA	-12	NA	36749050	36737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36748886
ES.293.12	chr1	-	2188	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	-9	1069	-9	-1069	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGGGCTCTGTGCTC	NA	False	NA	0	True	TATAAA	-45	NA	36749098	36738263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.13	chr1	-	1878	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	6	-1086	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	175.278191582537	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749022	36738280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.14	chr1	-	2445	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-16	-1086	intron_retention	FALSE	canonical	3	484	junction_1	34.797404716444	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749044	36738280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.16	chr1	-	2281	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-23	-1086	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749051	36738280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.18	chr1	-	1980	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-21	-1087	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	177.554877080299	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTGTGTGGCTCTGAT	NA	False	NA	-18	True	TATAAA	-27	NA	36749049	36738281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36748886
ES.293.19	chr1	-	2892	3	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-890	-1087	intron_retention	FALSE	canonical	3	484	junction_1	27	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGTGTGTGGCTCTGAT	NA	False	NA	-18	True	TATAAA	-27	NA	36741622	36738281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36741265_36741555
ES.293.2	chr1	-	3206	11	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	164.904699751099	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749054	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747330_36748886
ES.293.20	chr1	-	2216	12	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-15	-1090	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	209.343681202715	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCGGTGTGTGGCTCT	NA	False	NA	-21	True	TATAAA	-24	NA	36749043	36738284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745625_36745730_36745950_36746027_36747271_36747337_36748886
ES.293.21	chr1	-	1481	12	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-10	-1090	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	160.680423036247	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCGGTGTGTGGCTCT	NA	False	NA	-21	True	TATAAA	-24	NA	36749038	36738284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36738363_36738988_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.22	chr1	-	3466	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	23	-1092	intron_retention	FALSE	canonical	2	3	junction_5	180.928680700435	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGCCCGGTGTGTGGCT	NA	False	NA	-23	True	TATAAA	-22	NA	36749066	36738286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36741139_36741265_36741555_36741682_36745950_36746027_36747271
ES.293.24	chr1	-	1435	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	47	1766	-14	1333	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATGATTGGCTGCATG	NA	False	NA	NA	False	NA	NA	NA	36749042	36738960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.3	chr1	-	3143	11	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	164.904699751099	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749003	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748905
ES.293.4	chr1	-	3361	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749045	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.5	chr1	-	3318	12	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	209.343681202715	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749055	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745625_36745730_36745950_36746027_36747271_36747337_36748886
ES.293.6	chr1	-	4559	6	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-2276	0	intron_retention	FALSE	canonical	3	484	junction_1	24.9927989629013	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36743008	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555
ES.293.7	chr1	-	3530	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	484	junction_1	34.797404716444	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749043	36737194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.293.9	chr1	-	3395	10	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_2	176.333088286604	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAGTAAATATAGCC	NA	False	NA	NA	False	AATAAA	-13	NA	36749029	36737195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36739260_36739417_36739510_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ES.2930.1	chr10	+	121	1	Intergenic	novelGene_2253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62268328	62268449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62268300_62268400
ES.29300.1	chr6	-	4849	1	Intergenic	novelGene_24300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACATGCTCAGGTGCTC	NA	False	NA	NA	False	NA	NA	NA	116327054	116322205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_116322200_116327100
ES.29301.1	chr6	-	4006	1	Antisense	novelGene_ENSMUSG00000025702.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCTAACAAGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	116385756	116381750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_116381800_116385800
ES.29302.1	chr6	-	2584	14	FSM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	32	205	-15	-6	multi-exon	FALSE	canonical	0	0	junction_2	0.923076923076923	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGGTGTCATACCACA	NA	False	NA	NA	False	AATAAA	-9	NA	116438107	116387242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402_116390525_116390698_116390878_116391483_116391571_116392334_116392539_116397201_116397349_116400103_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077_116431277_116437835
ES.29303.1	chr6	-	2628	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	-330	889	-330	-1	multi-exon	FALSE	canonical	3	68	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGGGAAATTGTTTGC	NA	False	NA	12	True	AATAAA	-35	NA	116606290	116601865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116604095_116605891
ES.29303.2	chr6	-	2404	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	-45	16	32	2	multi-exon	FALSE	canonical	3	18	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTATCTATTTTACTTC	NA	False	NA	-3	True	AATAAA	-20	NA	116605928	116601880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116604095_116605738
ES.29303.4	chr6	-	2533	2	FSM	ENSMUSG00000059878.13	ENSMUST00000112880.8	2523	2	-28	18	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACTATCTATTTTACT	NA	False	NA	-5	True	AATAAA	-18	NA	116605690	116601882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116604095_116605369
ES.29304.1	chr6	-	6832	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	157	-529	3	529	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGAACAACGCTGTGC	8763	False	NA	NA	False	AAAAAG	-2	NA	116650756	116609439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.10	chr6	-	2425	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	155	3880	1	2336	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGACCAACCTTTCTT	8761	False	NA	NA	False	NA	NA	NA	116650758	116613848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.2	chr6	-	6351	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	111	-2	-32	2	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTGTTACTGTTTAG	8717	False	NA	2	True	AATAAA	-20	NA	116650802	116609966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.4	chr6	-	5670	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	112	678	-31	-678	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTACCAGTGGTCTTC	8718	False	NA	NA	False	NA	NA	NA	116650801	116610646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.6	chr6	-	5840	10	FSM	ENSMUSG00000042129.9	ENSMUST00000203029.3	1243	10	-8	-4589	-8	-1627	multi-exon	FALSE	canonical	3	13	junction_1	4.44722135470878	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTCTGTTAAGTGTGT	8741	False	NA	NA	False	NA	NA	NA	116650778	116611595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.7	chr6	-	4712	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	121	1627	-22	-1627	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTCTGTTAAGTGTGT	8727	False	NA	NA	False	NA	NA	NA	116650792	116611595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ES.29304.8	chr6	-	4649	9	NNC	ENSMUSG00000042129.9	novel	6460	11	NA	NA	-1939	-1629	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	7.89679523604354	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGACTCTGTTAAGTGT	8115	False	NA	NA	False	NA	NA	NA	116626836	116611597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116626619
ES.29304.9	chr6	-	4555	9	NNC	ENSMUSG00000042129.9	novel	6460	11	NA	NA	-477	-1631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.59869176095992	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGACTCTGTTAAGT	9577	False	NA	NA	False	NA	NA	NA	116625374	116611599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116625249
ES.29305.1	chr6	+	207	1	Intergenic	novelGene_24302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGT	787	False	NA	NA	False	NA	NA	NA	116927462	116927669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_116927500_116927700
ES.29306.1	chr6	-	240	1	Intergenic	novelGene_24303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATCTCGCCCCACCC	NA	False	NA	NA	False	NA	NA	NA	117270319	117270079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117270100_117270300
ES.29307.1	chr6	+	6865	2	Antisense	novelGene_ENSMUSG00000099869.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGCATTCCCAACAGC	NA	False	NA	NA	False	NA	NA	NA	117669076	117676352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_117669800_117670210
ES.29308.1	chr6	+	176	1	Intergenic	novelGene_24304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATGAAGATAAA	NA	False	NA	NA	False	NA	NA	NA	117809396	117809572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117809400_117809600
ES.29309.1	chr6	+	1150	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	-52	0	9	0	multi-exon	FALSE	canonical	3	26	junction_1	15	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	False	NA	10	True	AATAAA	-17	NA	117818150	117822916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117818230_117820213_117820354_117821985
ES.29309.2	chr6	+	1177	3	FSM	ENSMUSG00000059689.16	ENSMUST00000223041.2	1128	3	-49	0	24	0	multi-exon	FALSE	canonical	2	5	junction_2	10.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	False	NA	10	True	AATAAA	-17	NA	117818165	117822916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117818230_117820213_117820354_117821943
ES.29309.4	chr6	+	1187	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	13	-541	0	-1	multi-exon	FALSE	canonical	3	25	junction_1	15.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGGTATTTTTCATAAT	NA	False	NA	9	True	AATAAA	-16	NA	117818241	117822915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117818359_117820213_117820354_117821985
ES.2931.1	chr10	+	1539	1	FSM	ENSMUSG00000097129.3	ENSMUST00000238598.2	1865	1	320	6	320	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGAGTGTTGGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	62285587	62287126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62285600_62287100
ES.29310.1	chr6	+	168	1	Intergenic	novelGene_24305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTCCCCTACCA	NA	False	NA	NA	False	NA	NA	NA	117823587	117823755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117823600_117823800
ES.29311.1	chr6	+	3754	4	NNC	ENSMUSG00000042097.18	novel	1128	5	NA	NA	-8	233	intron_retention	FALSE	canonical	0	0	junction_3	15.5777619273972	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117839052	117846892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117839254_117839841_117840104_117843355_117843536_117843781
ES.29311.10	chr6	+	6830	1	NIC	ENSMUSG00000042097.18	novel	786	4	NA	NA	20	235	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117840064	117846894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_117840100_117846900
ES.29311.11	chr6	+	2192	6	NNC	ENSMUSG00000042097.18	novel	915	6	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	11.0453610171873	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGTCCAATGTGTTCAT	NA	False	NA	10	True	TTTAAA	-4	NA	117840069	117849724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117840104_117843355_117843536_117846178_117846235_117846362_117846438_117847216_117847312_117847972
ES.29311.12	chr6	+	231	1	Intergenic	novelGene_24306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTTGGGAGG	359	False	NA	NA	False	NA	NA	NA	117841631	117841862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117841600_117841900
ES.29311.2	chr6	+	4001	3	NNC	ENSMUSG00000042097.18	novel	2812	4	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_1	5.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117839062	117849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117839254_117839841_117840104_117846178
ES.29311.3	chr6	+	2152	1	Genic_Genomic	ENSMUSG00000042097.18	novel	NA	NA	NA	NA	-20	-4490	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	117840017	117842169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_117840000_117842200
ES.29311.4	chr6	+	2086	5	NNC	ENSMUSG00000042097.18	novel	2812	4	NA	NA	2	-799	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9.98436277385793	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCATATCAGAGGTAGC	NA	False	NA	NA	False	GATAAA	-17	NA	117840039	117848927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117840104_117843355_117843536_117846178_117846235_117846362_117846438_117847216
ES.29311.5	chr6	+	2882	5	NNC	ENSMUSG00000042097.18	novel	2812	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9.98436277385793	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCCAATGTGTTCATT	NA	False	NA	11	True	TTTAAA	-5	NA	117840041	117849725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117840104_117843355_117843536_117846178_117846235_117846362_117846438_117847216
ES.29311.6	chr6	+	3488	7	NNC	ENSMUSG00000042097.18	novel	915	6	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.21154838452807	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840041	117849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117840104_117842721_117842994_117843355_117843536_117843781_117844001_117844096_117844286_117846178_117846235_117847216
ES.29311.7	chr6	+	2625	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	7	526	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840044	117849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117840104_117846178_117846235_117847216
ES.29311.9	chr6	+	2785	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	27	0	20	0	multi-exon	FALSE	canonical	3	15	junction_2	8.52447456836295	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840064	117849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ES.29312.1	chr6	+	171	1	Intergenic	novelGene_24307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAAGACCCTCTT	NA	False	NA	NA	False	NA	NA	NA	117854767	117854938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117854800_117854900
ES.29313.1	chr6	-	332	1	Intergenic	novelGene_24308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCCAAAAACTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117855387	117855055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117855100_117855400
ES.29313.2	chr6	-	225	1	Intergenic	novelGene_24309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	117855387	117855162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117855200_117855400
ES.29314.1	chr6	+	1134	2	Intergenic	novelGene_24310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCCTTTACATTTTC	NA	False	NA	1	True	NA	NA	NA	117856597	117861553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117857120_117860941
ES.29314.2	chr6	+	908	3	Intergenic	novelGene_24311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCTTTACATTTTCT	NA	False	NA	2	True	NA	NA	NA	117856666	117861554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117857120_117860941_117861273_117861430
ES.29314.3	chr6	+	170	1	Intergenic	novelGene_24312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAGAAAGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	117856933	117857103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117856900_117857100
ES.29314.4	chr6	+	2240	1	Intergenic	novelGene_24313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCTTTACATTTTCT	NA	False	NA	2	True	NA	NA	NA	117859314	117861554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117859300_117861600
ES.29315.1	chr6	+	162	1	Intergenic	novelGene_24314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATAAATAAAGATTTT	3569	False	NA	NA	False	NA	NA	NA	117866655	117866817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_117866700_117866800
ES.29316.1	chr6	+	2357	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	-83	-3	-67	2	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGCTTATGTACTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	117877217	117902585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ES.29316.11	chr6	+	1809	5	FSM	ENSMUSG00000042079.14	ENSMUST00000179224.8	391	5	-1	-1417	-1	-404	multi-exon	FALSE	canonical	3	26	junction_1	2359.29156474989	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTTTCTCAATTAACATT	3728	False	NA	NA	False	AGTAAA	-18	NA	117883749	117902176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117883801_117884109_117884170_117894430_117894560_117896059_117896121_117900668
ES.29316.12	chr6	+	3197	4	NNC	ENSMUSG00000042079.14	novel	2147	4	NA	NA	-1	1	intron_retention	FALSE	canonical	3	602	junction_1	2063.97825139274	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	3728	False	NA	NA	False	AATAAA	-18	NA	117883749	117902584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
ES.29316.13	chr6	+	2172	4	NNC	ENSMUSG00000042079.14	novel	2147	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1996.08973300857	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	3735	False	NA	NA	False	AATAAA	-16	NA	117883756	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117883801_117894430_117894560_117896059_117896121_117900644
ES.29316.14	chr6	+	2206	5	FSM	ENSMUSG00000042079.14	ENSMUST00000179224.8	391	5	8	-1823	3	0	multi-exon	FALSE	canonical	3	26	junction_1	2359.29156474989	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	3737	False	NA	NA	False	AATAAA	-16	NA	117883758	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117883801_117884109_117884170_117894430_117894560_117896059_117896121_117900668
ES.29316.15	chr6	+	2501	4	NIC	ENSMUSG00000042079.14	novel	391	5	NA	NA	-13	1	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	3753	False	NA	NA	False	AATAAA	-18	NA	117883774	117902584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
ES.29316.17	chr6	+	2028	4	NIC	ENSMUSG00000042079.14	novel	391	5	NA	NA	2	-454	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTCTTCTAGCATGT	3768	False	NA	NA	False	ATTAAA	-28	NA	117883789	117902126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
ES.29316.18	chr6	+	2306	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	375	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	2341.44774777392	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4163	False	NA	NA	False	AATAAA	-16	NA	117884184	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884387_117894430_117894560_117896059_117896121_117900668
ES.29316.19	chr6	+	2329	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	845	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4633	False	NA	NA	False	AATAAA	-16	NA	117884654	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
ES.29316.2	chr6	+	1914	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	-37	394	-21	-392	multi-exon	FALSE	canonical	3	103	junction_1	2299.04709728956	2508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTTTTGGTAGTATA	NA	False	NA	NA	False	AGTAAA	-30	NA	117877263	117902188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ES.29316.22	chr6	+	1704	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	961	-468	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTCTCATGCAAACTT	4749	False	NA	NA	False	ATTAAA	-14	NA	117884770	117902112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
ES.29316.23	chr6	+	2106	3	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	968	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	295.5	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4756	False	NA	NA	False	AATAAA	-16	NA	117884777	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884841_117894430_117894560_117900668
ES.29316.24	chr6	+	2234	5	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	974	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	2038.02126767608	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCACAGCTTATGTA	4762	False	NA	NA	False	AATAAA	-14	NA	117884783	117902580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117896251_117896327_117900668
ES.29316.25	chr6	+	2158	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	975	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2264.33350507875	2510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	4763	False	NA	NA	False	AATAAA	-16	NA	117884784	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117884841_117894430_117894560_117896061_117896121_117900668
ES.29316.27	chr6	+	2393	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	1031	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2345.68786405087	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGCACAGCTTATG	4819	False	NA	NA	False	AATAAA	-12	NA	117884840	117902578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117885134_117894430_117894560_117896059_117896121_117900668
ES.29316.28	chr6	+	2287	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	-88	-1243	-88	3	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCTTATGTACTCAGC	NA	False	NA	NA	False	AATAAA	-20	NA	117893853	117902586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ES.29316.29	chr6	+	1738	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	-6	-776	-6	-461	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAAACTTTTCTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	117893935	117902119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ES.29316.3	chr6	+	1156	1	Genic_Genomic	ENSMUSG00000042079.14	novel	NA	NA	NA	NA	-21	-22340	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCCAGAATCTCAAGATA	NA	False	NA	NA	False	NA	NA	NA	117877263	117878419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_117877300_117878400
ES.29316.30	chr6	+	2166	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	-294	408	19	-406	multi-exon	FALSE	canonical	3	4878	junction_1	99	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCTTTTCTCAATTAACA	NA	False	NA	NA	False	AGTAAA	-16	NA	117893960	117902174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117894560_117896059_117896121_117900668
ES.29316.31	chr6	+	2575	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	-292	-3	21	2	multi-exon	FALSE	canonical	3	4878	junction_1	99	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGCTTATGTACTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	117893962	117902585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117894560_117896059_117896121_117900668
ES.29316.33	chr6	+	2277	3	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2538	2510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGCACAGCTTATG	NA	False	NA	NA	False	AATAAA	-12	NA	117894247	117902578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_117894560_117896065_117896121_117900668
ES.29316.34	chr6	+	3130	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	35	-885	26	884	multi-exon	FALSE	canonical	3	4878	junction_1	99	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGTGGAAGTCTTTTAT	NA	False	NA	NA	False	CATAAA	-9	NA	117894289	117903467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117894560_117896059_117896121_117900668
ES.29316.36	chr6	+	2134	2	ISM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	1642	4	1633	-2	3prime_fragment	FALSE	canonical	3	5076	junction_1	0	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGCACAGCTTATG	NA	False	NA	NA	False	AATAAA	-12	NA	117895896	117902578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_117896121_117900668
ES.29316.37	chr6	+	2161	1	FSM	ENSMUSG00000042079.14	ENSMUST00000180341.2	1922	1	-240	1	-240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	11	False	NA	NA	False	AATAAA	-16	NA	117900421	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117900400_117902600
ES.29316.4	chr6	+	2079	2	NIC	ENSMUSG00000042079.14	novel	2271	4	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGGCACAGCTTATGT	NA	False	NA	NA	False	AATAAA	-13	NA	117877299	117902579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_117877468_117900668
ES.29316.5	chr6	+	2126	3	NIC	ENSMUSG00000042079.14	novel	2271	4	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2538	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	117877316	117902582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_117877468_117896059_117896121_117900668
ES.29316.6	chr6	+	2223	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-72	-4	-67	1	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	3662	False	NA	NA	False	AATAAA	-18	NA	117883683	117902584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ES.29316.7	chr6	+	2272	5	FSM	ENSMUSG00000042079.14	ENSMUST00000177918.8	538	5	-84	-1650	-47	-2	multi-exon	FALSE	canonical	2	4	junction_4	2001.47200517519	2510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGGCACAGCTTATG	3682	False	NA	NA	False	AATAAA	-12	NA	117883703	117902578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117896251_117896327_117900668
ES.29316.8	chr6	+	1791	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	-38	394	-33	-394	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACATTTTTGGTAGTA	3696	False	NA	NA	False	AGTAAA	-28	NA	117883717	117902186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ES.29317.1	chr6	-	177	1	Intergenic	novelGene_24315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	117892227	117892050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117892000_117892200
ES.29318.1	chr6	-	5262	1	Antisense	novelGene_ENSMUSG00000042079.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAATGAGAGCCAGGCAAA	2907	False	NA	NA	False	NA	NA	NA	117904850	117899588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_117899600_117904800
ES.29318.10	chr6	-	435	1	Intergenic	novelGene_24319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117963817	117963382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117963400_117963800
ES.29318.11	chr6	-	190	1	Intergenic	novelGene_24320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAATTGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	117963817	117963627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117963600_117963800
ES.29318.2	chr6	-	175	2	Intergenic	novelGene_24316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	117963816	117900102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117900229_117963767
ES.29318.3	chr6	-	3661	2	NNC	ENSMUSG00000004988.10	novel	1199	8	NA	NA	1555	7017	intron_retention	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGTGTACTTACATAAA	5456	False	NA	NA	False	NA	NA	NA	117911359	117903502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_117904366_117908561
ES.29318.4	chr6	-	4789	2	Intergenic	novelGene_24317	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGTGTACTTACATAAA	8314	False	NA	NA	False	NA	NA	NA	117908501	117903502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117907699_117907908
ES.29318.5	chr6	-	6741	1	Genic_Genomic	ENSMUSG00000004988.10	novel	NA	NA	NA	NA	1849	6195	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACAAACAAATCAGCAT	5750	False	NA	NA	False	NA	NA	NA	117911065	117904324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_117904300_117911100
ES.29318.6	chr6	-	3366	1	Genic_Genomic	ENSMUSG00000004988.10	novel	NA	NA	NA	NA	1849	2820	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGGAATTGAGGAAATGGA	5750	False	NA	NA	False	NA	NA	NA	117911065	117907699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_117907700_117911100
ES.29318.7	chr6	-	553	9	ISM	ENSMUSG00000004988.10	ENSMUST00000203082.3	815	10	357	1	0	0	3prime_fragment	FALSE	canonical	1	3	junction_3	4.29389100932942	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTGGTCTTGTGACC	2519	False	NA	NA	False	ATTAAA	-16	NA	117914296	117910520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_117910710_117910804_117910843_117911275_117911313_117911386_117911462_117911969_117911994_117912115_117912149_117912814_117912884_117913698_117913742_117914251
ES.29318.8	chr6	-	1179	5	NNC	ENSMUSG00000004988.10	novel	522	9	NA	NA	-129	0	intron_retention	FALSE	non_canonical	0	0	junction_1	6.53356717268599	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTGGTCTTGTGACC	3772	False	NA	NA	False	ATTAAA	-16	NA	117913043	117910520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_117910679_117910804_117910843_117911275_117911997_117912115_117912149_117912814
ES.29318.9	chr6	-	181	1	Intergenic	novelGene_24318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	117954202	117954021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117954000_117954200
ES.29319.1	chr6	-	206	1	Intergenic	novelGene_24321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGCTTGCGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	117986685	117986479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_117986500_117986700
ES.2932.1	chr10	+	5206	2	Antisense	novelGene_ENSMUSG00000020078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACCAAAACAAAAAACAA	7522	False	NA	NA	False	NA	NA	NA	62308081	62313734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62308552_62308998
ES.2932.2	chr10	+	5483	1	Intergenic	novelGene_2255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGTGAGAGAAAACAGG	7522	False	NA	NA	False	NA	NA	NA	62308081	62313564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62308100_62313600
ES.2932.3	chr10	+	4946	1	Antisense	novelGene_ENSMUSG00000020078.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATTGTGTCCATA	NA	False	NA	NA	False	NA	NA	NA	62313056	62318002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62313100_62318000
ES.2932.4	chr10	+	4043	2	Antisense	novelGene_ENSMUSG00000020078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATTGTGTCCATA	NA	False	NA	NA	False	NA	NA	NA	62313764	62318002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62314445_62314639
ES.2932.5	chr10	+	175	1	Intergenic	novelGene_2256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCCTA	NA	False	NA	NA	False	NA	NA	NA	62314450	62314625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62314400_62314600
ES.29320.1	chr6	-	10681	1	Intergenic	novelGene_24322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	118026891	118016210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_118016200_118026900
ES.29321.1	chr6	+	3324	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-122	-975	-122	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043257	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ES.29321.11	chr6	+	4169	14	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_1	14.7968491768393	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043359	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118043424_118044973_118045047_118054858_118054931_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118066188_118066395_118066469_118066776
ES.29321.12	chr6	+	1863	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-11	375	-11	-304	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAATGTGAGCCCTGC	NA	False	NA	NA	False	TATAAA	-24	NA	118043368	118067157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ES.29321.13	chr6	+	3266	13	NNC	ENSMUSG00000030134.12	novel	3284	13	NA	NA	1534	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.6915873273948	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118044913	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118045047_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066420_118066469_118066776
ES.29321.14	chr6	+	4601	9	NIC	ENSMUSG00000030134.12	novel	3284	13	NA	NA	15956	-2	intron_retention	FALSE	canonical	3	30	junction_5	4.97336656601944	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTGTCTCTCTCTCT	1145	False	NA	1	True	NA	NA	NA	118059335	118068505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118066469_118066776
ES.29321.2	chr6	+	1748	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	-100	579	-100	-508	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGGCGCTTACACAG	NA	False	NA	NA	False	AAAAAG	-25	NA	118043279	118066953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ES.29321.3	chr6	+	3355	14	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11.8646209703147	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043298	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118043424_118054858_118054931_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ES.29321.4	chr6	+	3257	13	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	9.46484724300046	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043299	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066420_118066469_118066776
ES.29321.5	chr6	+	3422	10	NIC	ENSMUSG00000030134.12	novel	2183	13	NA	NA	-62	-511	intron_retention	FALSE	canonical	3	30	junction_1	5.2798241646741	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCTTTGGCGCTTACA	NA	False	NA	NA	False	AAAAAG	-22	NA	118043317	118066950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118066469_118066776
ES.29321.6	chr6	+	3300	14	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	13.3567348878349	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043328	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118043424_118054858_118054931_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066420_118066469_118066776
ES.29321.8	chr6	+	3657	12	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-43	-1	intron_retention	FALSE	canonical	0	0	junction_11	11.1214185432086	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTCTCTCTCTCTC	NA	False	NA	2	True	NA	NA	NA	118043336	118068506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118066469_118066776_118066936_118067532
ES.29321.9	chr6	+	4044	12	NIC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	-40	0	intron_retention	FALSE	canonical	3	26	junction_10	5.47722557505166	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043339	118068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118066188_118066395_118066469_118066776
ES.29322.1	chr6	-	3582	9	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1556127544905	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116085	118084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118085099_118085161_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ES.29322.10	chr6	-	3193	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	2	466	2	-466	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAAAGGGACCTGCTA	NA	False	NA	NA	False	AATAAA	-27	NA	118116099	118084878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ES.29322.11	chr6	-	1706	6	ISM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	23	12065	23	-10181	5prime_fragment	FALSE	canonical	3	48	junction_5	7.49933330370107	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGCAGTTTCAAT	NA	False	NA	NA	False	AATAAA	-11	NA	118116078	118096477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ES.29322.2	chr6	-	3540	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	17.0700836290289	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116089	118084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118098014_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ES.29322.3	chr6	-	3723	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	-62	0	-62	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116163	118084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ES.29322.4	chr6	-	4194	9	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.1558004853475	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116114	118084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118090834_118090958_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115586
ES.29322.5	chr6	-	4217	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	19.8195945097424	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116147	118084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115473
ES.29322.7	chr6	-	3704	9	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.0818915370035	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAATGTGGTAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	118116072	118084415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118112584_118112660_118115983
ES.29322.8	chr6	-	4042	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	20.1271468622934	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGAAAATGTGGTAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	118116089	118084416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115586
ES.29322.9	chr6	-	3189	8	NNC	ENSMUSG00000042042.15	novel	3661	8	NA	NA	52	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.4360625625688	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCTAAATGAAAATGTG	NA	False	NA	NA	False	AATAAA	-14	NA	118116049	118084422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106171_118115983
ES.29323.1	chr6	-	4119	19	FSM	ENSMUSG00000030110.14	ENSMUST00000088790.9	4497	19	343	35	-242	-35	multi-exon	FALSE	canonical	0	0	junction_9	1.69603750249708	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTTGTCTTGGATTA	NA	False	NA	NA	False	AGTAAA	-19	NA	118174336	118131561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152810_118153138_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137_118161402_118174021
ES.29324.1	chr6	-	219	1	Intergenic	novelGene_24323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTTTTCCTTCTCCTAAA	NA	False	NA	NA	False	NA	NA	NA	118214367	118214148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_118214100_118214400
ES.29325.1	chr6	-	233	1	Intergenic	novelGene_24324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAAACAGCTAGAT	NA	False	NA	NA	False	NA	NA	NA	118218199	118217966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_118218000_118218200
ES.29326.1	chr6	+	215	1	Intergenic	novelGene_24325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTATACATCAAAACCACA	4396	False	NA	NA	False	NA	NA	NA	118379149	118379364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_118379100_118379400
ES.29327.10	chr6	-	6068	21	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	1	junction_5	109.42719040531	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8343	False	NA	-3	True	ATTAAA	-14	NA	118396377	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369170_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118395579_118396248
ES.29327.13	chr6	-	4058	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.66922468964	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8362	False	NA	-3	True	ATTAAA	-14	NA	118396358	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361203_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369631_118369912_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.14	chr6	-	4288	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.547429059005	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8326	False	NA	-3	True	ATTAAA	-14	NA	118396394	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360821_118361197_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.15	chr6	-	4161	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	5	junction_19	109.449657377262	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8354	False	NA	-3	True	ATTAAA	-14	NA	118396366	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118395369_118395579_118396248
ES.29327.16	chr6	-	4355	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-6	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	135.67595114397	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8341	False	NA	-3	True	ATTAAA	-14	NA	118396379	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369339_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375106_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.18	chr6	-	4223	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_7	104.47615291982	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8335	False	NA	-3	True	ATTAAA	-14	NA	118396385	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.2	chr6	-	4126	2	ISM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	31605	0	31535	0	3prime_fragment	FALSE	canonical	3	525	junction_1	0	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	NA	False	NA	-1	True	ATTAAA	-16	NA	118364830	118360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118360837_118361199
ES.29327.22	chr6	-	5663	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_4	133.597613429468	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8345	False	NA	-3	True	ATTAAA	-14	NA	118396375	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366791_118367222_118367395_118367431_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.23	chr6	-	1953	12	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	20850	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	184.975718754991	512	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	NA	False	NA	-3	True	ATTAAA	-14	NA	118375515	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118375241
ES.29327.24	chr6	-	3181	17	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	118.510284363848	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8345	False	NA	-3	True	ATTAAA	-14	NA	118396375	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388469_118396248
ES.29327.25	chr6	-	4795	22	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-5	-2	intron_retention	FALSE	canonical	2	285	junction_21	61.1404093858059	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8342	False	NA	-3	True	ATTAAA	-14	NA	118396378	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.27	chr6	-	5485	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	0	-2	intron_retention	FALSE	canonical	2	285	junction_20	60.1862941208378	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8347	False	NA	-3	True	ATTAAA	-14	NA	118396373	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.28	chr6	-	4384	22	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-25	-2	intron_retention	FALSE	canonical	2	285	junction_21	61.0015426740733	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8322	False	NA	-3	True	ATTAAA	-14	NA	118396398	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.3	chr6	-	5960	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-2	0	intron_retention	FALSE	canonical	2	285	junction_20	62.3717884944788	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8345	False	NA	-1	True	ATTAAA	-16	NA	118396375	118360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118395579_118396248
ES.29327.30	chr6	-	4121	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	105.813378522662	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8361	False	NA	-3	True	ATTAAA	-14	NA	118396359	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394441_118395416_118395579_118396248
ES.29327.31	chr6	-	5062	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	6	junction_7	106.893933060628	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8341	False	NA	-3	True	ATTAAA	-14	NA	118396379	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118394540_118395369_118395579_118396248
ES.29327.32	chr6	-	3976	24	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	103.709733799138	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8325	False	NA	-3	True	ATTAAA	-14	NA	118396395	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118381769_118382095_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.33	chr6	-	4174	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	105.333237437624	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8336	False	NA	-3	True	ATTAAA	-14	NA	118396384	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.34	chr6	-	5311	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	106.909460072817	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8348	False	NA	-3	True	ATTAAA	-14	NA	118396372	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382296_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.35	chr6	-	4118	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	105.333237437624	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	8322	False	NA	-3	True	ATTAAA	-14	NA	118396398	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.36	chr6	-	4181	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.714848811757	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8344	False	NA	-4	True	ATTAAA	-13	NA	118396376	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366369_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.38	chr6	-	3894	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	158.256143017328	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8356	False	NA	-4	True	ATTAAA	-13	NA	118396364	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390689_118390881_118393423_118393504_118395369_118395579_118396248
ES.29327.39	chr6	-	4207	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	106.714848811757	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8325	False	NA	-4	True	ATTAAA	-13	NA	118396395	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118369250_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.40	chr6	-	4256	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	105.988976894489	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8378	False	NA	-4	True	ATTAAA	-13	NA	118396342	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394341_118394540_118395369_118395579_118396248
ES.29327.41	chr6	-	4272	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	105.813378522662	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8348	False	NA	-4	True	ATTAAA	-13	NA	118396372	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394533_118395369_118395579_118396248
ES.29327.43	chr6	-	7484	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	1	-3	intron_retention	FALSE	canonical	2	285	junction_20	61.4471114048496	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGCCTAGTGATTT	8356	False	NA	-4	True	ATTAAA	-13	NA	118396364	118360344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.49	chr6	-	5105	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	15	-4	intron_retention	FALSE	canonical	1	1	junction_6	106.467288153273	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGGCCTAGTGATT	8370	False	NA	-5	True	ATTAAA	-12	NA	118396350	118360345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118369338_118369504_118369616_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.5	chr6	-	4005	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	110.891151585688	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8354	False	NA	-1	True	ATTAAA	-16	NA	118396366	118360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118395369_118395579_118396248
ES.29327.50	chr6	-	3581	19	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	148.258127002273	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGGCCTAGTGATT	8345	False	NA	-5	True	ATTAAA	-12	NA	118396375	118360345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388469_118394348_118394540_118395367_118395579_118396248
ES.29327.51	chr6	-	4274	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	105.984444515876	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTTGGCCTAGTGAT	8345	False	NA	-6	True	ATTAAA	-11	NA	118396375	118360346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375111_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.52	chr6	-	4733	21	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	864	-5	intron_retention	FALSE	canonical	1	1	junction_7	107.266152629802	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTTGGCCTAGTGAT	9219	False	NA	-6	True	ATTAAA	-11	NA	118395501	118360346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369616_118369881_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118394540_118395369
ES.29327.53	chr6	-	5223	21	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-22	-5	intron_retention	FALSE	canonical	2	285	junction_20	62.0777536642556	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTTGGCCTAGTGAT	8325	False	NA	-6	True	ATTAAA	-11	NA	118396395	118360346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118394540_118395369_118395579_118396248
ES.29327.54	chr6	-	4378	22	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-16	-6	intron_retention	FALSE	canonical	0	0	junction_14	107.843928550336	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATTTTGGCCTAGTGA	8331	False	NA	-7	True	ATTAAA	-10	NA	118396389	118360347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388435_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.55	chr6	-	2985	16	NNC	ENSMUSG00000030138.9	novel	3071	13	NA	NA	-3	987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.756861350462	498	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTCCAACTGTGATT	8344	False	NA	NA	False	AATAAA	-38	NA	118396376	118372736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118372969_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.56	chr6	-	212	1	Intergenic	novelGene_24326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAATACTTATTTGATAT	NA	False	NA	NA	False	NA	NA	NA	118386594	118386382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_118386400_118386600
ES.29327.57	chr6	-	3645	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	33	5	3	-5	multi-exon	FALSE	canonical	3	13	junction_5	4.48998886412873	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTTCATTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	118432456	118404284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
ES.29327.59	chr6	-	3712	7	NNC	ENSMUSG00000030145.15	novel	3683	6	NA	NA	0	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.95685135416257	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAACTCGAGTTGTCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	118432463	118404368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118407356_118409817_118409908_118410265_118410393_118422370_118422515_118430806_118430849_118431637_118431873_118432376
ES.29327.6	chr6	-	5296	27	Fusion	ENSMUSG00000030138.9_ENSMUSG00000030145.15	novel	4345	23	NA	NA	-78	-1	multi-exon	FALSE	non_canonical	0	0	junction_6	168.149359500986	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCTAGTGATTTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	118432104	118360342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369339_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248_118396661_118409817_118409908_118410265_118410393_118430806_118430849_118431637
ES.29327.60	chr6	-	2809	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	40	834	10	534	multi-exon	FALSE	canonical	3	13	junction_5	4.48998886412873	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGCTGTATCTCACTG	NA	False	NA	NA	False	NA	NA	NA	118432449	118405113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
ES.29327.61	chr6	-	2823	5	NNC	ENSMUSG00000030145.15	novel	3683	6	NA	NA	153	532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.87420882906575	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCTGCTGTATCTCAC	NA	False	NA	NA	False	NA	NA	NA	118431873	118405115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430937_118431637
ES.29327.62	chr6	-	2105	6	NNC	ENSMUSG00000030145.15	novel	3683	6	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	7.80768851837725	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTCTTCCAAATCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	118432451	118405646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431700_118432376
ES.29327.63	chr6	-	565	6	NNC	ENSMUSG00000030145.15	novel	3683	6	NA	NA	9	-1538	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	7.80768851837725	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGTGACTCATGTGA	NA	False	NA	NA	False	NA	NA	NA	118432450	118407185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431700_118432376
ES.29327.7	chr6	-	4310	23	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	105.874994511499	520	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGCCTAGTGATTTAT	8326	False	NA	-2	True	ATTAAA	-15	NA	118396394	118360342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388435_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ES.29327.9	chr6	-	6137	19	NNC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	2896	-2	intron_retention	TRUE	canonical	0	0	junction_4	166.264366315133	520	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCCTAGTGATTTA	NA	False	NA	-3	True	ATTAAA	-14	NA	118393469	118360343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366791_118367222_118367395_118367431_118369338_118369504_118369953_118373087_118373268_118373723_118373796_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423
ES.29328.2	chr6	-	3989	6	FSM	ENSMUSG00000072623.7	ENSMUST00000161170.2	3968	6	-26	5	-26	-5	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCCCATGATGTTCAT	NA	False	NA	NA	False	AATAAA	-38	NA	118456307	118438915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118442362_118442795_118442860_118443788_118443882_118444199_118444327_118454267_118454386_118456166
ES.29329.1	chr6	-	8638	35	NNC	ENSMUSG00000007827.11	novel	707	3	NA	NA	-15	15284	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.9540814499649	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	AGTAAA	-12	NA	118539202	118462984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118465881_118477091_118477308_118482682_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509309_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.10	chr6	-	6874	33	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	15.0508253511228	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539230	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.11	chr6	-	6817	33	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_31	15.2063925702318	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539248	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.29329.12	chr6	-	6888	35	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.7093243639667	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539229	118478269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500100_118500182_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.13	chr6	-	7200	33	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_21	16.5184555876147	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539184	118478269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.29329.14	chr6	-	7300	33	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	16.8874953737966	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539240	118478269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.15	chr6	-	7221	33	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.3600093632938	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118539221	118478269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485758_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504648_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.29329.16	chr6	-	3468	10	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-52	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	23.9304547943968	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAATCCTATATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	118500248	118478269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118498801_118498955_118499899
ES.29329.18	chr6	-	7424	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_21	14.0305321010163	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACATGAATCCTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	118539236	118478271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.19	chr6	-	6857	33	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	2913	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	17.2100987794957	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACATGAATCCTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	118536274	118478271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504648_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231
ES.29329.2	chr6	-	5953	22	NNC	ENSMUSG00000007827.11	novel	707	3	NA	NA	9076	14635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.717249766951	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGTATGGTTTCCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	118516981	118463633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118465744_118477091_118477308_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509309_118510275_118510428_118512039_118512105_118516646_118516726_118516807
ES.29329.20	chr6	-	1769	2	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-4019	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACATGAATCCTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	118504215	118478271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118479586_118503760
ES.29329.21	chr6	-	7037	35	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	16.8937499959996	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACATGAATCCTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	118539226	118478271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517213_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.23	chr6	-	6839	33	NIC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-44	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	15.6424902109607	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATACATGAATCCTATA	NA	False	NA	NA	False	AATAAA	-16	NA	118539231	118478273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.24	chr6	-	7460	35	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	20.8119151725349	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCATACATGAATCCTA	NA	False	NA	NA	False	AATAAA	-14	NA	118539198	118478275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509309_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535689_118535790_118535898_118536073_118536231_118536347_118538773
ES.29329.26	chr6	-	7382	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-35	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	16.6550372650246	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTCATACATGAATCC	NA	False	NA	NA	False	AATAAA	-12	NA	118539222	118478277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509309_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.28	chr6	-	6850	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-7	-102	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATGTAGATTAATGGC	NA	False	NA	NA	False	NA	NA	NA	118539194	118478370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.29	chr6	-	6872	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-44	102	-44	-102	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATGTAGATTAATGGC	NA	False	NA	NA	False	NA	NA	NA	118539231	118478370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.3	chr6	-	3641	18	NNC	ENSMUSG00000007827.11	novel	707	3	NA	NA	-9019	1481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0448637215462	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAACTTTTGCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	118509215	118476787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118477308_118477446_118477504_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162
ES.29329.30	chr6	-	5702	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-28	1256	-28	-1256	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAACAAAGATA	NA	False	NA	NA	False	NA	NA	NA	118539215	118479524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.31	chr6	-	5705	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-22	-1262	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTTAAAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	118539209	118479530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.32	chr6	-	5572	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	321	-1485	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_21	14.0305321010163	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTTGTACAAATAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	118538866	118479753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.33	chr6	-	5488	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-44	1486	-44	-1486	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATTTTGTACAAATAATA	NA	False	NA	NA	False	AATAAA	-16	NA	118539231	118479754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.34	chr6	-	5503	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-45	-1487	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATTTTGTACAAATAAT	NA	False	NA	NA	False	AATAAA	-15	NA	118539232	118479755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.35	chr6	-	5431	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	5	-1487	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	15.7555942810115	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATTTTGTACAAATAAT	NA	False	NA	NA	False	AATAAA	-15	NA	118539182	118479755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509309_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.36	chr6	-	5143	33	ISM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	5	4351	5	-4351	5prime_fragment	FALSE	canonical	3	23	junction_20	12.5971226873441	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTAATTTTCCTTGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	118539182	118482619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.37	chr6	-	4341	28	NNC	ENSMUSG00000007827.11	novel	707	3	NA	NA	-44	1221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0045260661287	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTTTGTGTCTCGTGTT	NA	False	NA	NA	False	AATACA	-11	NA	118539231	118493894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118494135_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.38	chr6	-	5239	25	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-28	1221	intron_retention	FALSE	canonical	3	7	junction_23	14.9434117776215	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTTTGTGTCTCGTGTT	NA	False	NA	NA	False	AATACA	-11	NA	118539215	118493894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.29329.39	chr6	-	4405	26	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-39	202	intron_retention	FALSE	canonical	3	18	junction_13	11.6362193172869	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAATCAGAGGAAAT	NA	False	NA	NA	False	AATATA	-45	NA	118539226	118494913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.4	chr6	-	6990	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	12.9133582362079	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539232	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.40	chr6	-	3420	21	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	3	-8553	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	10.5464448986376	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGTGTAATCTTTATT	NA	False	NA	NA	False	CATAAA	-21	NA	118539184	118503668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.41	chr6	-	3269	20	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-21	-8554	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	14.3581031008187	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACAGTGTAATCTTTAT	NA	False	NA	NA	False	CATAAA	-20	NA	118539208	118503669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.29329.42	chr6	-	1706	14	NNC	ENSMUSG00000007827.11	novel	389	3	NA	NA	-25	2704	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	14.8272099144159	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGTGGATCTTCACAG	NA	False	NA	NA	False	ATTAAA	-21	NA	118539212	118517180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.5	chr6	-	7409	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	14.8227358683406	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539233	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.8	chr6	-	6980	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	-50	0	-50	0	multi-exon	FALSE	canonical	3	23	junction_21	12.4668891127898	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539237	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ES.29329.9	chr6	-	6810	33	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_31	15.5748883924573	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539226	118478268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118536231_118536347_118538773
ES.2933.1	chr10	+	188	1	Intergenic	novelGene_2257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62332658	62332846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62332700_62332800
ES.29330.1	chr6	+	5173	3	Antisense	novelGene_ENSMUSG00000051331.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGCTGTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	118570862	118581632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_118575134_118580303_118580450_118580876
ES.29330.2	chr6	+	4382	2	Antisense	novelGene_ENSMUSG00000051331.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTATATATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	118570898	118576821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_118575134_118576674
ES.29331.1	chr6	-	3985	16	ISM	ENSMUSG00000051331.17	ENSMUST00000188181.7	7577	42	130467	0	439	0	3prime_fragment	TRUE	canonical	0	0	junction_2	1.02415276638248	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAAAAGCTTTACCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	118604468	118569279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118571156_118572816_118573153_118574888_118574993_118575621_118575729_118578093_118578220_118579002_118579356_118580808_118580944_118581397_118581526_118583173_118583276_118587448_118587552_118589527_118589625_118590203_118590332_118590872_118591039_118601327_118601420_118602449_118602516_118604402
ES.29331.2	chr6	-	3280	16	ISM	ENSMUSG00000051331.17	ENSMUST00000188181.7	7577	42	130486	686	458	-63	3prime_fragment	FALSE	canonical	0	0	junction_2	1.02415276638248	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTTTGGTTGAGCAT	NA	False	NA	NA	False	AGTAAA	-18	NA	118604449	118569965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118571156_118572816_118573153_118574888_118574993_118575621_118575729_118578093_118578220_118579002_118579356_118580808_118580944_118581397_118581526_118583173_118583276_118587448_118587552_118589527_118589625_118590203_118590332_118590872_118591039_118601327_118601420_118602449_118602516_118604402
ES.29331.3	chr6	-	2736	16	ISM	ENSMUSG00000051331.17	ENSMUST00000188181.7	7577	42	130445	1271	417	57	3prime_fragment	FALSE	canonical	0	0	junction_2	1.02415276638248	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTGTCTGAGCCTGGC	NA	False	NA	NA	False	TATAAA	-14	NA	118604490	118570550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_118571156_118572816_118573153_118574888_118574993_118575621_118575729_118578093_118578220_118579002_118579356_118580808_118580944_118581397_118581526_118583173_118583276_118587448_118587552_118589527_118589625_118590203_118590332_118590872_118591039_118601327_118601420_118602449_118602516_118604402
ES.29332.1	chr6	-	5147	1	Intergenic	novelGene_24327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7448	False	NA	NA	False	NA	NA	NA	118750578	118745431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_118745400_118750600
ES.29333.1	chr6	-	177	1	Intergenic	novelGene_24328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	2517	False	NA	NA	False	NA	NA	NA	119118755	119118578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119118600_119118800
ES.29334.1	chr6	+	1927	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	-24	1410	-24	0	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152189	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
ES.29334.10	chr6	+	1328	4	ISM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	31215	1431	6007	0	3prime_fragment	FALSE	canonical	3	31	junction_1	18.1903515328563	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAATGTTTTATACTGT	8159	False	NA	-12	True	NA	NA	NA	119183428	119197146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_119183560_119191730_119192568_119194763_119194941_119196963
ES.29334.11	chr6	+	6499	2	FSM	ENSMUSG00000041477.15	ENSMUST00000127059.2	2048	2	-5857	1406	-5857	2	multi-exon	FALSE	canonical	3	71	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGGGGTTTTGTTCC	NA	False	NA	11	True	AGTAAA	-18	NA	119188647	119197169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119194941_119196963
ES.29334.12	chr6	+	3997	3	NNC	ENSMUSG00000041477.15	novel	4209	6	NA	NA	-5484	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	29	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119189020	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119192568_119194694_119194941_119196963
ES.29334.2	chr6	+	1953	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152232	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
ES.29334.3	chr6	+	4083	8	NIC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-16	3	intron_retention	FALSE	canonical	3	31	junction_6	11.7038280847223	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGGGGTTTTGTTCCT	NA	False	NA	12	True	AGTAAA	-19	NA	119152232	119197170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119194941_119196963
ES.29334.4	chr6	+	1837	9	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.0574788468989	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTCTGGGGGTTTTGTTC	NA	False	NA	10	True	AGTAAA	-17	NA	119152243	119197168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191767_119192568_119194763_119194941_119196963
ES.29334.5	chr6	+	1759	8	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.1534068776184	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152244	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177766_119177913_119191730_119192568_119194763_119194941_119196963
ES.29334.6	chr6	+	2467	7	ISM	ENSMUSG00000041477.15	ENSMUST00000073909.6	1748	9	-4	3603	-4	1735	5prime_fragment	FALSE	canonical	3	31	junction_6	7.46100976186646	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGAGGCTGTGTCCCCT	NA	False	NA	NA	False	ATTAAA	-27	NA	119152244	119193543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730
ES.29334.7	chr6	+	1020	8	NNC	ENSMUSG00000041477.15	novel	3313	9	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.2408803494713	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGTAAAATGTTTTATA	NA	False	NA	-16	True	NA	NA	NA	119152250	119197142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177766_119177913_119183430_119183560_119194763_119194941_119196963
ES.29334.8	chr6	+	6344	6	FSM	ENSMUSG00000041477.15	ENSMUST00000149651.8	4209	6	-2135	0	-2135	0	multi-exon	FALSE	canonical	0	0	junction_1	22.8962879087419	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119167181	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119169786_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119194941_119196963
ES.29334.9	chr6	+	1464	6	NNC	ENSMUSG00000041477.15	novel	4209	6	NA	NA	-1533	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.8962879087419	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	619	False	NA	9	True	AGTAAA	-16	NA	119175888	119197167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194843_119194941_119196963
ES.29335.1	chr6	-	7822	1	Antisense	novelGene_ENSMUSG00000041477.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	3186	False	NA	NA	False	NA	NA	NA	119193558	119185736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_119185700_119193600
ES.29336.1	chr6	-	3864	6	NNC	ENSMUSG00000055003.15	novel	3569	5	NA	NA	-7516	-1	intron_retention	FALSE	canonical	0	0	junction_3	0.748331477354788	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTTGCTTCATTGGGT	NA	False	NA	-1	True	AATAAA	-17	NA	119315243	119292094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119294472_119297381_119297973_119300609_119300739_119301161_119301370_119307455_119307570_119314798
ES.29336.2	chr6	-	3998	7	NNC	ENSMUSG00000055003.15	novel	3569	5	NA	NA	-7505	-1	intron_retention	FALSE	canonical	0	0	junction_3	0.74535599249993	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTTGCTTCATTGGGT	NA	False	NA	-1	True	AATAAA	-17	NA	119315232	119292094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119294472_119297381_119297973_119300609_119300739_119301161_119301370_119302781_119302927_119307455_119307570_119314798
ES.29336.3	chr6	-	3399	6	NNC	ENSMUSG00000055003.15	novel	3569	5	NA	NA	-5563	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.894427190999916	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTTGCTTCATTGGG	849	False	NA	-2	True	AATAAA	-16	NA	119313290	119292095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119294472_119297381_119297973_119300609_119300739_119301258_119301370_119307455_119307570_119313212
ES.29337.1	chr6	+	247	1	Intergenic	novelGene_24329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATGTCAATTTAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	119378084	119378331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119378100_119378300
ES.29338.1	chr6	-	4205	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-100	-616	-100	1	multi-exon	TRUE	canonical	3	86	junction_7	15.2168005969771	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTGTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-22	NA	119365747	119330109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ES.29338.12	chr6	-	4221	9	NNC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-58	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	48.7030222368181	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGAGTTTTGTTGTGT	7496	False	NA	-8	True	AATAAA	-13	NA	119394494	119330118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119383187_119383404_119394380
ES.29338.13	chr6	-	4152	9	NNC	ENSMUSG00000030168.14	novel	3489	8	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.9730474342776	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGAGTTTTGTTGTGT	NA	False	NA	-8	True	AATAAA	-13	NA	119365644	119330118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119346820_119346880_119347110_119347370_119365442
ES.29338.14	chr6	-	2067	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-53	1475	-53	226	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAGAATTTATATAAA	NA	False	NA	NA	False	AAGAAA	-32	NA	119365700	119332200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ES.29338.15	chr6	-	2061	9	NNC	ENSMUSG00000030168.14	novel	3489	8	NA	NA	-29	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.9730474342776	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAGAAATTAATGTAAA	NA	False	NA	NA	False	AATAAA	-37	NA	119365676	119332241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119346820_119346880_119347110_119347370_119365442
ES.29338.16	chr6	-	1965	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	-61	1585	-61	116	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGTTAGGGGAACATT	NA	False	NA	NA	False	NA	NA	NA	119365708	119332310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ES.29338.17	chr6	-	2738	1	Intergenic	novelGene_24330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1221	False	NA	NA	False	NA	NA	NA	119388940	119386202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119386200_119388900
ES.29338.18	chr6	-	1262	1	NIC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-78	-46141	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAGGTGGCCACCCAA	7476	False	NA	NA	False	NA	NA	NA	119394514	119393252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119393300_119394500
ES.29338.2	chr6	-	4029	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	152	3	-77	-3	multi-exon	FALSE	canonical	3	26	junction_7	32.1685611510775	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7477	False	NA	-3	True	AATAAA	-18	NA	119394513	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ES.29338.3	chr6	-	4092	9	NNC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	49.3330518009985	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7515	False	NA	-3	True	AATAAA	-18	NA	119394475	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119357833_119357935_119394380
ES.29338.4	chr6	-	4077	9	NNC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-16	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	49.3330518009985	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7538	False	NA	-3	True	AATAAA	-18	NA	119394452	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119374489_119374599_119394380
ES.29338.5	chr6	-	3967	9	NNC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-58	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.3642592635108	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7496	False	NA	-3	True	AATAAA	-18	NA	119394494	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119331970_119332012_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ES.29338.6	chr6	-	3961	7	NIC	ENSMUSG00000030168.14	novel	3489	8	NA	NA	-48	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.0977698010503	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	NA	False	NA	-3	True	AATAAA	-18	NA	119365695	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119332890_119334176_119334371_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ES.29338.7	chr6	-	3803	7	NIC	ENSMUSG00000030168.14	novel	4184	8	NA	NA	-39	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	48.4309359351598	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTGTTGTGTTTTTT	7515	False	NA	-3	True	AATAAA	-18	NA	119394475	119330113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119332890_119334176_119334371_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ES.29339.1	chr6	+	135	1	Intergenic	novelGene_24331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119430176	119430311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119430200_119430300
ES.2934.1	chr10	+	2080	1	Intergenic	novelGene_2259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	374	False	NA	NA	False	AGTAAA	-23	NA	62340609	62342689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62340600_62342700
ES.29340.1	chr6	+	3378	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-415	0	-415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCCTTGTATCTGTGA	NA	False	NA	42	True	AATAAA	-43	NA	119456213	119459591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119456200_119459600
ES.29340.2	chr6	+	2413	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-379	929	-379	-929	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATATATGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	119456249	119458662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119456200_119458700
ES.29340.3	chr6	+	3627	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	-365	-299	-365	299	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTGGCCAGTTTCTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	119456263	119459890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119456300_119459900
ES.29340.4	chr6	+	1629	2	Genic_Genomic	ENSMUSG00000030019.7	novel	2963	1	NA	NA	-109	-17	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCACAAAATCC	NA	False	NA	25	True	AATAAA	-26	NA	119456519	119459574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_119457973_119459398
ES.29341.1	chr6	-	2360	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-22	-164	-22	164	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAACAGTCTATGAGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	119426369	119409327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
ES.29341.2	chr6	-	2340	5	FSM	ENSMUSG00000030170.15	ENSMUST00000119369.2	2339	5	-1	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_4	5.21416340365355	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTCTCCCTCTCCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	119521280	119409494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119520941
ES.29341.3	chr6	-	2179	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	-8	3	-8	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTCTCCCTCTCCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	119426355	119409494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
ES.29341.4	chr6	-	2073	5	NNC	ENSMUSG00000030170.15	novel	2339	5	NA	NA	-844	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.21416340365355	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTCTCCCTCTCCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	119427191	119409494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119427119
ES.29341.5	chr6	-	2150	5	NNC	ENSMUSG00000030170.15	novel	2339	5	NA	NA	270	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.21416340365355	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTCTCTCCCTCTCCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	119426077	119409494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119425928
ES.29341.7	chr6	-	1371	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	30	773	30	-770	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATGGATGGATGATAG	NA	False	NA	NA	False	NA	NA	NA	119426317	119410264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
ES.29341.8	chr6	-	3372	1	Antisense	novelGene_ENSMUSG00000030019.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATATGCTTTTGGTC	9397	False	NA	NA	False	ATTAAA	-23	NA	119457819	119454447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_119454400_119457800
ES.29341.9	chr6	-	261	1	Intergenic	novelGene_24332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAACCCAAACTAAGAC	NA	False	NA	NA	False	NA	NA	NA	119485089	119484828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119484800_119485100
ES.29342.1	chr6	+	4981	1	Antisense	novelGene_ENSMUSG00000030172.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGTTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	119594097	119599078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_119594100_119599100
ES.29343.1	chr6	+	3207	4	Antisense	novelGene_ENSMUSG00000030172.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTGAGAGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	119719914	119732616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_119720442_119726797_119726939_119728159_119728301_119730218
ES.29344.1	chr6	+	4136	1	Intergenic	novelGene_24335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAAACATCTGTCAAC	NA	False	NA	NA	False	NA	NA	NA	119765157	119769293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119765200_119769300
ES.29345.1	chr6	+	206	1	Intergenic	novelGene_24336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAAAGCAGGCTGAG	NA	False	NA	NA	False	NA	NA	NA	119772434	119772640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119772400_119772600
ES.29346.1	chr6	+	4779	2	Antisense	novelGene_ENSMUSG00000030172.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTTGATAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	119810085	119816272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_119814766_119816173
ES.29347.1	chr6	+	4410	1	Intergenic	novelGene_24337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACCATTTAAAAACAAAAAC	NA	False	NA	NA	False	AATACA	-33	NA	119825400	119829810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119825400_119829800
ES.29348.1	chr6	-	8627	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	1	intron_retention	FALSE	canonical	3	90	junction_15	15.3676146570284	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCAGCCTTCTTGAGT	NA	False	NA	NA	False	TATAAA	-17	NA	119825128	119547755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.10	chr6	-	9033	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-325	-3	intron_retention	FALSE	canonical	0	0	junction_18	37.8351871284067	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTGCAGCCTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	119825453	119547759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802727_119824837
ES.29348.11	chr6	-	8075	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	-4	intron_retention	FALSE	canonical	2	4	junction_18	28.5575668788288	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGCAGCCTTCT	NA	False	NA	NA	False	TATAAA	-12	NA	119825111	119547760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119801581_119802110_119802171_119824837
ES.29348.13	chr6	-	7652	18	NNC	ENSMUSG00000030172.16	novel	8356	19	NA	NA	6871	0	intron_retention	FALSE	canonical	1	4	junction_17	30.0745325591358	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTGTGCTGCAGCC	NA	False	NA	NA	False	TATAAA	-8	NA	119795316	119547764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119795167
ES.29348.14	chr6	-	3210	3	NNC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	0	811	intron_retention	FALSE	non_canonical	0	0	junction_1	49	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATCAATATCATGTTAAC	NA	False	NA	3	True	ATTAAA	-25	NA	119825128	119548779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119551079_119801550_119802171_119824837
ES.29348.15	chr6	-	7601	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-6	803	intron_retention	FALSE	canonical	3	90	junction_15	15.3676146570284	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAAACCCATCAATATC	NA	False	NA	-5	True	ATTAAA	-45	NA	119825134	119548787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.16	chr6	-	6626	18	NNC	ENSMUSG00000030172.16	novel	8356	19	NA	NA	6870	799	intron_retention	FALSE	canonical	1	4	junction_17	30.0745325591358	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATGCAAACCCATCAA	NA	False	NA	-9	True	ATTAAA	-41	NA	119795317	119548791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119795167
ES.29348.17	chr6	-	7659	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	3	798	intron_retention	FALSE	canonical	3	7	junction_19	35.7214523873935	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGATGCAAACCCATCA	NA	False	NA	-10	True	ATTAAA	-40	NA	119825108	119548792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
ES.29348.18	chr6	-	7303	17	NIC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	1	797	intron_retention	FALSE	canonical	0	0	junction_12	31.9195766732581	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGATGCAAACCCATC	NA	False	NA	-11	True	ATTAAA	-39	NA	119825094	119548793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.19	chr6	-	7562	19	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	2	782	intron_retention	FALSE	non_canonical	0	0	junction_14	30.1169018622065	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825109	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755040_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.20	chr6	-	7717	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-4	782	intron_retention	FALSE	canonical	0	0	junction_18	36.0633483879812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825132	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ES.29348.21	chr6	-	7539	19	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-8	782	intron_retention	FALSE	canonical	3	7	junction_5	40.1029924070511	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825136	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
ES.29348.22	chr6	-	6527	17	NNC	ENSMUSG00000030172.16	novel	3865	18	NA	NA	6888	782	intron_retention	FALSE	canonical	0	0	junction_16	40.0140600289448	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119795299	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119795147
ES.29348.23	chr6	-	7760	21	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	9	782	intron_retention	FALSE	canonical	0	0	junction_18	42.2751700173991	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825086	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119817033_119817123_119824837
ES.29348.24	chr6	-	7612	20	NIC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	-4	782	intron_retention	FALSE	canonical	0	0	junction_2	37.1523777028479	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825099	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119595806_119595874_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.26	chr6	-	6725	18	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-8	782	intron_retention	FALSE	canonical	2	8	junction_17	29.2694202528461	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825103	119548808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119824837
ES.29348.29	chr6	-	7466	18	NIC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	1	776	intron_retention	FALSE	canonical	3	7	junction_13	29.5637250837991	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAGAGCTGTGT	NA	False	NA	-32	True	ATTAAA	-26	NA	119825110	119548814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.3	chr6	-	6588	10	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	33.2264954516723	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825089	119547756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552059_119730215_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.30	chr6	-	7633	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-8	776	intron_retention	FALSE	canonical	0	0	junction_17	47.4921775159631	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAGAGCTGTGT	NA	False	NA	-32	True	ATTAAA	-26	NA	119825103	119548814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802727_119817033_119817123_119824837
ES.29348.33	chr6	-	6599	18	NNC	ENSMUSG00000030172.16	novel	8356	19	NA	NA	6882	776	intron_retention	FALSE	non_canonical	0	0	junction_8	46.0236888003976	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAGAGCTGTGT	NA	False	NA	-32	True	ATTAAA	-26	NA	119795305	119548814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726797_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750699_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119795155
ES.29348.35	chr6	-	6941	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	3	775	intron_retention	FALSE	canonical	0	0	junction_18	30.0467228754744	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTAAAGAGCTGTG	NA	False	NA	-33	True	ATTAAA	-25	NA	119825092	119548815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119801581_119824837
ES.29348.37	chr6	-	6631	17	NIC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	-8	772	intron_retention	FALSE	canonical	2	7	junction_13	38.7798272301463	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAAAAAATTAAAGAGCT	NA	False	NA	-36	True	ATTAAA	-22	NA	119825103	119548818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119824837
ES.29348.38	chr6	-	7622	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-6	772	intron_retention	FALSE	canonical	0	0	junction_18	37.8351871284067	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAAAAAATTAAAGAGCT	NA	False	NA	-36	True	ATTAAA	-22	NA	119825101	119548818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802727_119824837
ES.29348.39	chr6	-	7424	22	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	335	772	intron_retention	FALSE	canonical	0	0	junction_19	50.1451408153601	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAAAAAATTAAAGAGCT	NA	False	NA	-36	True	ATTAAA	-22	NA	119824685	119548818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754939_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119801581_119802110_119802171_119802641_119802781_119817033_119817123_119824241
ES.29348.4	chr6	-	6112	8	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_7	46.3663319089819	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825120	119547756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119824837
ES.29348.40	chr6	-	7370	18	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-7	756	intron_retention	FALSE	canonical	0	0	junction_12	30.9752663915531	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGTAGTTATAGAACT	NA	False	NA	-52	True	ATTAAA	-6	NA	119825118	119548834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.41	chr6	-	4697	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-8	-123	combination_of_known_junctions	FALSE	canonical	3	90	junction_15	15.3676146570284	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTGCACATCCATGT	NA	False	NA	NA	False	NA	NA	NA	119825103	119551660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.42	chr6	-	4791	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	2	-124	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	35.7214523873935	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTGCACATCCATG	NA	False	NA	NA	False	NA	NA	NA	119825109	119551661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
ES.29348.43	chr6	-	4487	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	21	207	combination_of_known_junctions	FALSE	canonical	3	90	junction_15	15.3676146570284	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGTACCTGCCTAGAA	NA	False	NA	NA	False	NA	NA	NA	119824999	119551766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.44	chr6	-	3924	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	-3	-1473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.0633076878743	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGGTCTATCCTACT	NA	False	NA	NA	False	NA	NA	NA	119825098	119553963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119554259_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.45	chr6	-	177	1	Intergenic	novelGene_24333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	119559908	119559731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119559700_119559900
ES.29348.46	chr6	-	11822	17	NNC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	2	5322	intron_retention	FALSE	canonical	3	7	junction_11	44.4641709694446	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTGACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	119825109	119588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
ES.29348.47	chr6	-	5240	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	-2	5322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.169213888799	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTGACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	119825097	119588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119595806_119595874_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.48	chr6	-	5334	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	-8	5322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	42.9832008528397	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTGACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	119825119	119588905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ES.29348.49	chr6	-	11801	17	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-4	5300	intron_retention	FALSE	canonical	3	90	junction_13	15.4078662945263	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119825115	119588927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.5	chr6	-	8719	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	7	junction_19	35.7214523873935	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825132	119547756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119817033_119817123_119824837
ES.29348.50	chr6	-	4006	17	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	1	4290	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	36.3464234829233	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGGCACAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	119825094	119589937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119597271_119597371_119607563_119607709_119671531_119671693_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.51	chr6	-	4219	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	1	4288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.169213888799	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTCTGGCACAAAGTT	NA	False	NA	NA	False	NA	NA	NA	119825110	119589939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119595806_119595874_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.52	chr6	-	4126	19	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	7	4238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.2197444867011	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTTATCTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	119825104	119589989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119597271_119597371_119606523_119606554_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.53	chr6	-	4729	1	FSM	ENSMUSG00000030172.16	ENSMUST00000204666.2	4839	1	4346	-4236	4346	4236	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTTTTATCTTGAA	NA	False	NA	NA	False	NA	NA	NA	119594720	119589991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_119590000_119594700
ES.29348.54	chr6	-	4082	18	NNC	ENSMUSG00000030172.16	novel	2304	6	NA	NA	0	4233	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	30.0543912928903	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATCTGTGTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	119825095	119589994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119590640_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29348.55	chr6	-	4822	17	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	-1	28107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.25	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAAAGGTAATTGTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	119825096	119670131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119817033_119817123_119824837
ES.29348.56	chr6	-	3051	1	Intergenic	novelGene_24334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAAATGAATATA	NA	False	NA	NA	False	AGTAAA	-44	NA	119764786	119761735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119761700_119764800
ES.29348.6	chr6	-	8732	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_18	36.0633483879812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825095	119547756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ES.29348.7	chr6	-	7800	18	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	-2	intron_retention	FALSE	canonical	2	8	junction_17	29.2694202528461	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTGCAGCCTTCTTG	NA	False	NA	NA	False	TATAAA	-14	NA	119825128	119547758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119824837
ES.29348.8	chr6	-	8510	18	NIC	ENSMUSG00000030172.16	novel	6719	20	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	7	junction_13	29.5637250837991	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTGCAGCCTTCTTG	NA	False	NA	NA	False	TATAAA	-14	NA	119825098	119547758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
ES.29349.1	chr6	-	159	1	Intergenic	novelGene_24338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	119829195	119829036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_119829000_119829200
ES.2935.1	chr10	+	217	1	Intergenic	novelGene_2260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGAGTGGCCATCTA	NA	False	NA	NA	False	NA	NA	NA	62359044	62359261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62359000_62359300
ES.29350.1	chr6	+	148	1	Intergenic	novelGene_24339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGAGCGAGTAGGGC	NA	False	NA	NA	False	NA	NA	NA	119836911	119837059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119836900_119837100
ES.29351.1	chr6	+	2118	11	FSM	ENSMUSG00000030166.15	ENSMUST00000161816.8	1603	11	-187	-328	-157	9	multi-exon	FALSE	canonical	3	22	junction_8	12.9769025580067	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAGTCCTTTACC	NA	False	NA	NA	False	NA	NA	NA	119879501	119898604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767
ES.29351.10	chr6	+	1716	9	NIC	ENSMUSG00000030166.15	novel	1603	11	NA	NA	-9	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	19.0423048762486	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-29	NA	119879679	119898575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119895547_119895748_119895886_119896039_119897070_119897152_119897767
ES.29351.11	chr6	+	4392	7	NIC	ENSMUSG00000030166.15	novel	1617	12	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	6	junction_6	19.692779274535	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTTTGGCTTCA	NA	False	NA	0	True	ATTAAA	-13	NA	119879679	119899781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899435
ES.29351.12	chr6	+	959	3	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_2	1	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879679	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119895547_119896039_119899432
ES.29351.13	chr6	+	2771	9	NIC	ENSMUSG00000030166.15	novel	1617	12	NA	NA	2	-3	intron_retention	FALSE	canonical	2	6	junction_8	17.6878312689826	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTTTGGCTTCA	NA	False	NA	0	True	ATTAAA	-13	NA	119879690	119899781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899435
ES.29351.14	chr6	+	1730	7	NIC	ENSMUSG00000030166.15	novel	1603	11	NA	NA	12	-19	intron_retention	FALSE	canonical	0	0	junction_4	22.8521820013368	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-30	NA	119879711	119898576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119890065_119891130_119891199_119895547_119896039_119897070_119897152_119897767
ES.29351.15	chr6	+	4866	9	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	5010	-1	intron_retention	FALSE	canonical	3	14	junction_2	16.3382220574945	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119884746	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119888103_119889962_119890065_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899432
ES.29351.16	chr6	+	3576	8	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	-3096	-1	intron_retention	FALSE	canonical	3	31	junction_7	11.8528391501095	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119887102	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119888103_119889962_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899432
ES.29351.17	chr6	+	1648	6	NIC	ENSMUSG00000030166.15	novel	1603	11	NA	NA	241	7	intron_retention	FALSE	canonical	3	38	junction_4	10.4115320678563	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGCAGAGTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	119891152	119898602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767
ES.29351.2	chr6	+	1706	12	NNC	ENSMUSG00000030166.15	novel	1693	12	NA	NA	-21	-1	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_8	18.7929123266993	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879637	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895889_119896039_119897070_119897152_119897767_119897981_119899432
ES.29351.3	chr6	+	4683	8	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	31	junction_7	12.1889880044009	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879643	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899432
ES.29351.4	chr6	+	2679	7	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_6	24.3019203630769	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879663	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889783_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119899432
ES.29351.5	chr6	+	1734	10	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	14	junction_3	15.4488403016753	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879666	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119890065_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119896039_119897070_119897152_119897767_119897990_119899432
ES.29351.6	chr6	+	2658	10	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	22	junction_6	13.7580503930348	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879669	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
ES.29351.7	chr6	+	1867	8	NIC	ENSMUSG00000030166.15	novel	1603	11	NA	NA	-10	9	intron_retention	FALSE	canonical	0	0	junction_4	22.4353947764578	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAGTCCTTTACC	NA	False	NA	NA	False	NA	NA	NA	119879678	119898604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889962_119890065_119891130_119891199_119892927_119893004_119895547_119896039_119897070_119897152_119897767
ES.29351.8	chr6	+	1673	12	FSM	ENSMUSG00000030166.15	ENSMUST00000032269.12	1617	12	-57	1	-9	-1	multi-exon	FALSE	canonical	2	6	junction_11	16.8914864369477	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCTTTGGCTTCAGG	NA	False	NA	2	True	ATTAAA	-15	NA	119879679	119899783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899435
ES.29351.9	chr6	+	1767	11	NIC	ENSMUSG00000030166.15	novel	1604	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	20.0372153753959	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTTCAGGTTTTTA	NA	False	NA	8	True	ATTAAA	-21	NA	119879679	119899789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_119879797_119888008_119888103_119889783_119890065_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
ES.29352.1	chr6	-	8072	2	Antisense	novelGene_ENSMUSG00000030166.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119890208	119881929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_119885686_119885892
ES.29353.1	chr6	+	1159	1	Antisense	novelGene_ENSMUSG00000045962.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCCAGTTGCTTTCCCA	NA	False	NA	NA	False	AATAAA	-44	NA	119939655	119940814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_119939700_119940800
ES.29353.2	chr6	+	3374	1	Antisense	novelGene_ENSMUSG00000045962.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAGTGTAAGACATA	NA	False	NA	NA	False	NA	NA	NA	119939655	119943029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_119939700_119943000
ES.29354.1	chr6	+	4644	1	Intergenic	novelGene_24340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACATTAAAAAAAATCACTC	NA	False	NA	NA	False	NA	NA	NA	119984427	119989071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_119984400_119989100
ES.29355.1	chr6	+	178	1	Intergenic	novelGene_24341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGACACTGT	NA	False	NA	NA	False	NA	NA	NA	120005423	120005601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120005400_120005600
ES.29356.1	chr6	-	8492	26	ISM	ENSMUSG00000045962.17	ENSMUST00000060043.13	10575	28	46223	0	80	0	3prime_fragment	FALSE	canonical	1	2	junction_17	5.3420595279349	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTTGTTCTTTCTGA	1614	False	NA	-1	True	AATAAA	-21	NA	119969410	119900929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119930731_119931194_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300
ES.29356.10	chr6	-	4108	17	ISM	ENSMUSG00000045962.17	ENSMUST00000088646.12	8364	26	35292	23301	-9838	2401	internal_fragment	FALSE	canonical	2	3	junction_9	4.52769256906871	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTACATGTTTTCAGC	2140	False	NA	NA	False	AATAAA	-24	NA	119979328	119924882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153
ES.29356.11	chr6	-	4811	10	NNC	ENSMUSG00000045962.17	novel	11303	28	NA	NA	-5	438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.32870169256969	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTATTGTCTAATTTTAA	7170	False	NA	NA	False	NA	NA	NA	120015621	119938830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119940594_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834_120015314_120015435
ES.29356.12	chr6	-	4186	2	NIC	ENSMUSG00000045962.17	novel	11303	28	NA	NA	22	405	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAAAAATAAAACATT	3093	False	NA	NA	False	AATGAA	-40	NA	119945602	119938863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119942884_119945436
ES.29356.13	chr6	-	2805	7	ISM	ENSMUSG00000045962.17	ENSMUST00000159397.8	5745	10	-97	15808	-32	96	5prime_fragment	FALSE	canonical	2	6	junction_4	3.590109871423	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAGAAAAAAGAAAACAAG	7126	False	NA	NA	False	NA	NA	NA	120015665	119946418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ES.29356.14	chr6	-	4519	4	ISM	ENSMUSG00000045962.17	ENSMUST00000159397.8	5745	10	-104	34313	-39	-17216	5prime_fragment	FALSE	canonical	2	6	junction_1	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTTCTACAAATTTTAT	7119	False	NA	NA	False	AATAAA	-18	NA	120015672	119964923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119967211_119969300_119969522_119979153_119979327_120013834
ES.29356.3	chr6	-	10155	27	NIC	ENSMUSG00000045962.17	novel	10575	28	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	4.75494137246941	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTTGTTCTTTCTGA	7116	False	NA	-1	True	AATAAA	-21	NA	120015675	119900929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ES.29356.4	chr6	-	5801	15	NNC	ENSMUSG00000045962.17	novel	11330	28	NA	NA	-788	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	5.68967916315075	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	3951	False	NA	-3	True	AATAAA	-19	NA	119929747	119900931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119903649_119904007_119904128_119914589_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645
ES.29356.5	chr6	-	9970	28	NNC	ENSMUSG00000045962.17	novel	11330	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	5.26577582714346	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	7175	False	NA	-3	True	AATAAA	-19	NA	120015616	119900931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834_120015317_120015440
ES.29356.6	chr6	-	10142	28	NIC	ENSMUSG00000045962.17	novel	11330	28	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.71355570488876	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	7169	False	NA	-3	True	AATAAA	-19	NA	120015622	119900931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_119903649_119904007_119904196_119906786_119906829_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ES.29356.8	chr6	-	1548	4	ISM	ENSMUSG00000045962.17	ENSMUST00000088646.12	8364	26	101266	927	56	-927	3prime_fragment	FALSE	canonical	3	16	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTACTTGAATACTT	8259	False	NA	NA	False	AATAAA	-22	NA	119913354	119902508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329
ES.29356.9	chr6	-	6582	18	ISM	ENSMUSG00000045962.17	ENSMUST00000088646.12	8364	26	-1002	22613	-6	-2904	5prime_fragment	FALSE	canonical	2	3	junction_9	4.39250698884576	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGAATGAATATTCCT	7169	False	NA	NA	False	AATAAA	-21	NA	120015622	119924194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ES.29357.1	chr6	+	152	1	Intergenic	novelGene_24342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAATAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	120032357	120032509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120032400_120032500
ES.29358.1	chr6	+	3872	1	Intergenic	novelGene_24343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACTCCCAGCAGGGTAG	NA	False	NA	NA	False	AAAAAG	-32	NA	120037455	120041327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120037500_120041300
ES.29359.1	chr6	-	168	1	Intergenic	novelGene_24344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAGAGACTGGAGTT	NA	False	NA	NA	False	NA	NA	NA	120039613	120039445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120039400_120039600
ES.2936.1	chr10	-	4363	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	18	-1777	18	1777	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAAAGCCTTGGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	62285499	62263210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.10	chr10	-	6494	12	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	8	6	intron_retention	FALSE	canonical	1	2	junction_11	102.825375521997	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTATCTGGTTTGTTTGTT	NA	False	NA	22	True	NA	NA	NA	62285509	62265112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62268245_62268830_62270394_62271237_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62284194
ES.2936.11	chr10	-	2415	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.8915320935869	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTATCTGGTTTGTTTG	NA	False	NA	20	True	NA	NA	NA	62285497	62265114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270352_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.13	chr10	-	6790	12	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	133.07575671321	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTACTATCTGGTTTG	NA	False	NA	16	True	TTTAAA	-45	NA	62285461	62265118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62268245_62268830_62268912_62270173_62271389_62271488_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279176_62279343_62280817_62282911_62283474_62283553_62285193
ES.2936.14	chr10	-	2331	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	118.845466459429	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTACTATCTGGTTT	NA	False	NA	15	True	TTTAAA	-44	NA	62285477	62265119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268131_62268245_62268830_62268912_62270173_62270357_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.15	chr10	-	4144	14	NIC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	12	-2	intron_retention	FALSE	canonical	2	10	junction_9	93.6341868483171	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTTGTACTATCTGGTT	NA	False	NA	14	True	TTTAAA	-43	NA	62285505	62265120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62265614_62266249_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.17	chr10	-	2413	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	19	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	89.1711550780811	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACACGGCATTCTCTGC	NA	False	NA	-23	True	AATAAA	-19	NA	62285498	62265157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280937_62282808_62282911_62283474_62283553_62285193
ES.2936.19	chr10	-	3195	14	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	19	-39	intron_retention	FALSE	canonical	2	8	junction_2	94.4795773304706	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACACGGCATTCTCTGC	NA	False	NA	-23	True	AATAAA	-19	NA	62285498	62265157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268131_62268245_62268830_62268912_62270173_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.2	chr10	-	2591	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	12	1	12	-1	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTTTGTAATTGCCT	NA	False	NA	94	True	AATAGA	-17	NA	62285505	62264988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.20	chr10	-	2882	14	Fusion	ENSMUSG00000020079.16_ENSMUSG00000020078.17	novel	2604	15	NA	NA	-6549	-39	multi-exon	FALSE	canonical	0	0	junction_13	95.7532578585843	914	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACACGGCATTCTCTGC	NA	False	NA	-23	True	AATAAA	-19	NA	62292066	62265157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62291216
ES.2936.21	chr10	-	3701	7	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	-5879	-39	intron_retention	FALSE	canonical	2	5	junction_3	126.942791139246	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACACGGCATTCTCTGC	NA	False	NA	-23	True	AATAAA	-19	NA	62274785	62265157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62268912_62270173_62270357_62271237_62271332_62271424_62271606_62273212_62273305_62274752
ES.2936.22	chr10	-	5533	12	NIC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	-6	-40	intron_retention	FALSE	canonical	2	205	junction_9	42.5662342417163	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCACACGGCATTCTCTG	NA	False	NA	-24	True	AATAAA	-18	NA	62285468	62265158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62268245_62268830_62268912_62270173_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.23	chr10	-	6627	11	NIC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	19	-40	intron_retention	FALSE	canonical	2	205	junction_8	44.8251045732188	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCACACGGCATTCTCTG	NA	False	NA	-24	True	AATAAA	-18	NA	62285498	62265158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62265614_62266249_62268245_62268830_62268912_62270173_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.24	chr10	-	3700	12	NIC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	2551	-41	intron_retention	FALSE	canonical	2	205	junction_11	46.5954986652978	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62282911	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62265614_62266249_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802
ES.2936.25	chr10	-	6667	11	NIC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	1963	-41	intron_retention	FALSE	canonical	2	10	junction_7	102.885810489105	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62283499	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62265614_62266249_62268245_62268830_62268912_62270173_62271332_62271424_62271606_62273212_62273305_62274752_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474
ES.2936.26	chr10	-	4512	23	Fusion	ENSMUSG00000020079.16_ENSMUSG00000020078.17	novel	2519	15	NA	NA	-11	-41	multi-exon	FALSE	canonical	0	0	junction_14	380.724507782788	978	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	5246	False	NA	-25	True	AATAAA	-17	NA	62322536	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62291216_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.27	chr10	-	2238	14	NIC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	19	-41	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	93.962727093461	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62285498	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62265588_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.28	chr10	-	2349	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	20	-41	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	116.272375507351	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62285497	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265588_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270357_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.3	chr10	-	2523	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	14	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.8915320935869	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGAGTGTCTTTGAGG	NA	False	NA	70	True	AGTAAA	-37	NA	62285503	62265012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270352_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.31	chr10	-	3639	14	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	18	-41	intron_retention	FALSE	canonical	2	5	junction_4	94.5845478204053	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62285499	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62270357_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.32	chr10	-	4386	14	NNC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	-1999	-41	intron_retention	FALSE	canonical	0	0	junction_13	95.3553304920833	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62287516	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62287386
ES.2936.33	chr10	-	5924	14	NNC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	16	-41	intron_retention	FALSE	non_canonical	0	0	junction_9	118.492203823137	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCACACGGCATTCTCT	NA	False	NA	-25	True	AATAAA	-17	NA	62285501	62265159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62275264_62275329_62277026_62279157_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.34	chr10	-	2285	15	NNC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	6	-42	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	136.448633528653	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCACACGGCATTCTC	NA	False	NA	-26	True	AATAAA	-16	NA	62285456	62265160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268131_62268245_62268830_62268912_62270173_62270357_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.35	chr10	-	3070	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	44	-517	-15	475	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGTTTGCCCCCTGC	5242	False	NA	NA	False	AATAAA	-17	NA	62322540	62290538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.36	chr10	-	2900	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-5	391	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTCTTTTCTGATGC	5252	False	NA	NA	False	TATAAA	-16	NA	62322530	62290622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.37	chr10	-	2642	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	0	-45	0	3	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCATTACAGCATTGC	5198	False	NA	-2	True	AATAAA	-18	NA	62322584	62291010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.39	chr10	-	2537	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTCATTACAGCAT	5224	False	NA	-5	True	AATAAA	-15	NA	62322558	62291013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.4	chr10	-	2314	15	NNC	ENSMUSG00000020079.16	novel	2604	15	NA	NA	-2108	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.4127001166893	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGAGTGTCTTTGAGG	NA	False	NA	70	True	AGTAAA	-37	NA	62287625	62265012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62287566
ES.2936.40	chr10	-	4651	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	953	junction_6	53.93571381274	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTCATTACAGCAT	5251	False	NA	-5	True	AATAAA	-15	NA	62322531	62291013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.41	chr10	-	2278	7	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	21	3	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	383.247816548104	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTGTAGTTTAAATAAA	5292	False	NA	-3	True	AATAAA	-20	NA	62322490	62291047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62316336_62316487_62322436
ES.2936.42	chr10	-	2416	8	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_6	415.458586064476	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTGTAGTTTAAATAAA	5278	False	NA	-3	True	AATAAA	-20	NA	62322504	62291047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294813_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.43	chr10	-	2688	9	NNC	ENSMUSG00000020078.17	novel	2712	9	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	442.500123587553	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5334	False	NA	-6	True	AATAAA	-17	NA	62322448	62291050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294760_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322156
ES.2936.44	chr10	-	2497	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	185	junction_2	286.724933516428	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5270	False	NA	-6	True	AATAAA	-17	NA	62322512	62291050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294813_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.45	chr10	-	2762	9	FSM	ENSMUSG00000020078.17	ENSMUST00000092473.5	2712	9	-88	38	46	-1	multi-exon	FALSE	canonical	3	27	junction_8	336.090552344156	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGTTTGTAGTTTAAA	5317	False	NA	-7	True	AATAAA	-16	NA	62322465	62291051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322156
ES.2936.46	chr10	-	2775	10	Fusion	ENSMUSG00000020077.15_ENSMUSG00000020078.17	novel	2712	9	NA	NA	-16	2	multi-exon	FALSE	canonical	0	0	junction_8	430.944641399121	728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAGTTTGTAGTTTA	NA	False	NA	-9	True	AATAAA	-14	NA	62363246	62291053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62343420_62343616_62363117
ES.2936.47	chr10	-	2486	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	347.119193325578	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAGTTTGTAGTTTA	5306	False	NA	-9	True	AATAAA	-14	NA	62322476	62291053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294848_62299476_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.48	chr10	-	2818	10	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	434.332182142245	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAGTTTGTAGTTTA	5255	False	NA	-9	True	AATAAA	-14	NA	62322527	62291053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294846_62294930_62295207_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.49	chr10	-	2719	8	NIC	ENSMUSG00000020078.17	novel	2712	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	447.586452713955	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5280	False	NA	-11	True	AATAAA	-12	NA	62322502	62291055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322156
ES.2936.50	chr10	-	2317	7	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	394.032746806094	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5252	False	NA	-11	True	AATAAA	-12	NA	62322530	62291055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62322436
ES.2936.51	chr10	-	2400	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	346.299504675903	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5245	False	NA	-11	True	AATAAA	-12	NA	62322537	62291055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62322436
ES.2936.52	chr10	-	2592	10	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.553266958115	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5245	False	NA	-11	True	AATAAA	-12	NA	62322537	62291055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62314999_62315042_62316336_62316487_62322436
ES.2936.54	chr10	-	2485	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	460.118581862328	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	5260	False	NA	-15	True	AATAAA	-8	NA	62322522	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305802_62306823_62306905_62316352_62316487_62322436
ES.2936.55	chr10	-	2450	10	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	329.940436076006	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	5256	False	NA	-15	True	AATAAA	-8	NA	62322526	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292049_62292133_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.56	chr10	-	2164	6	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	414.302111990755	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	5244	False	NA	-15	True	AATAAA	-8	NA	62322538	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62322436
ES.2936.57	chr10	-	2681	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	515.525444934583	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	5255	False	NA	-15	True	AATAAA	-8	NA	62322527	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294760_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306273_62306553_62316336_62316487_62322436
ES.2936.58	chr10	-	3831	6	ISM	ENSMUSG00000020078.17	ENSMUST00000092473.5	2712	9	14929	46	14929	-4	intron_retention	FALSE	canonical	3	1000	junction_3	40.6575946165043	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	NA	False	NA	-15	True	AATAAA	-8	NA	62307448	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679
ES.2936.6	chr10	-	2530	15	FSM	ENSMUSG00000020079.16	ENSMUST00000162023.2	2519	15	-6	-5	-6	5	multi-exon	FALSE	canonical	2	10	junction_10	90.2367916729566	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATTATAGCCTTTAAAA	NA	False	NA	54	True	AGTAAA	-21	NA	62285468	62265028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.61	chr10	-	4454	7	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	55	-4	intron_retention	FALSE	canonical	3	111	junction_5	357.464877839612	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	5326	False	NA	-15	True	AATAAA	-8	NA	62322456	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.62	chr10	-	3983	1	NIC	ENSMUSG00000020078.17	novel	2712	9	NA	NA	27335	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	702	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACTTAAGTTTGT	NA	False	NA	-15	True	AATAAA	-8	NA	62295042	62291059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62291100_62295000
ES.2936.65	chr10	-	1514	7	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	41	-678	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	490.089674334084	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTACTTTCCATGTGT	5312	False	NA	0	True	CATAAA	-32	NA	62322470	62291733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62292638_62294760_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62316336_62316487_62322436
ES.2936.66	chr10	-	1860	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	54	683	-5	-683	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGGACTACTTTCCA	5252	False	NA	-5	True	CATAAA	-27	NA	62322530	62291738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.67	chr10	-	1799	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	28	-694	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTTTTAATTTAAGG	5226	False	NA	-16	True	CATAAA	-16	NA	62322556	62291749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.68	chr10	-	1566	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	36	995	-23	-995	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGTGTTTATTTTTAC	5234	False	NA	NA	False	NA	NA	NA	62322548	62292050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.69	chr10	-	1405	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	-1057	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACCTGAGCAGCCCTT	5257	False	NA	NA	False	ATTAAA	-23	NA	62322525	62292112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.7	chr10	-	4861	13	NIC	ENSMUSG00000020079.16	novel	2519	15	NA	NA	13	-5	intron_retention	FALSE	canonical	2	10	junction_8	94.6091374492384	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAAATTACTTATTATA	NA	False	NA	44	True	AGTAAA	-11	NA	62285504	62265038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.70	chr10	-	3490	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	35	-1064	intron_retention	FALSE	canonical	3	953	junction_6	53.93571381274	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAGAAAAACCTGAGC	5306	False	NA	NA	False	ATTAAA	-16	NA	62322476	62292119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.71	chr10	-	1366	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	43	1188	-16	-1188	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGGTATTTGTAAT	5241	False	NA	86	True	CATAAA	-20	NA	62322541	62292243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.72	chr10	-	1253	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	5	-1190	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGACTGGTATTTGTA	5276	False	NA	84	True	CATAAA	-18	NA	62322506	62292245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.73	chr10	-	1251	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	55	1291	-4	-1291	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTGGAAACACTGGAGA	5253	False	NA	-17	True	ATTAAA	-30	NA	62322529	62292346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ES.2936.74	chr10	-	1134	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	15	-1299	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCTTCTTGGAAAC	5286	False	NA	-25	True	ATTAAA	-22	NA	62322496	62292354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
ES.2936.75	chr10	-	174	1	Intergenic	novelGene_2254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	670	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATGGATAAT	NA	False	NA	NA	False	NA	NA	NA	62300968	62300794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62300800_62301000
ES.2936.76	chr10	-	1749	4	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6254	-179	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	4.10960933531265	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGGGAGATGTCATCT	NA	False	NA	NA	False	ATTAAA	-15	NA	62350130	62329790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62349816
ES.2936.77	chr10	-	1335	4	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6257	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	4.10960933531265	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGTGGCTATGTGACATG	NA	False	NA	-3	True	AATAAA	-20	NA	62350133	62330207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62349816
ES.2936.78	chr10	-	1167	4	FSM	ENSMUSG00000020077.15	ENSMUST00000160987.8	1727	4	-37	597	-37	-2	multi-exon	FALSE	canonical	2	4	junction_3	6.34209919681348	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGTGGCTATGTGACAT	NA	False	NA	-4	True	AATAAA	-19	NA	62363267	62330208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62330886_62333557_62333703_62343420_62343616_62363117
ES.2936.79	chr10	-	1486	5	NNC	ENSMUSG00000020077.15	novel	1727	4	NA	NA	-6250	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.61684396980704	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAATAAAGTGAAA	NA	False	NA	-36	True	AATATA	-16	NA	62350126	62330240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62330886_62333557_62333703_62343420_62343616_62348868_62349060_62349816
ES.2936.8	chr10	-	2733	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	-253	124	-253	7	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATCTGGTTTGTTTGTTT	NA	False	NA	23	True	NA	NA	NA	62285770	62265111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ES.2936.80	chr10	-	171	1	Intergenic	novelGene_2258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGCGAGCAGGGCC	8409	False	NA	NA	False	NA	NA	NA	62334334	62334163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62334200_62334300
ES.29360.1	chr6	+	192	1	Intergenic	novelGene_24345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTTTTTTTTTAGCT	NA	False	NA	NA	False	AATAAA	-9	NA	120055444	120055636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120055400_120055600
ES.29361.1	chr6	+	223	1	Intergenic	novelGene_24346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTATTAAAATAGATTAAA	NA	False	NA	NA	False	NA	NA	NA	120064236	120064459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120064200_120064500
ES.29362.1	chr6	-	121	1	Intergenic	novelGene_24347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	120065048	120064927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120064900_120065000
ES.29363.1	chr6	-	310	1	Intergenic	novelGene_24348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGTTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	120066242	120065932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120065900_120066200
ES.29364.1	chr6	+	188	1	Intergenic	novelGene_24349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAGCAT	9178	False	NA	NA	False	NA	NA	NA	120102553	120102741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120102600_120102700
ES.29364.2	chr6	+	405	1	Intergenic	novelGene_24350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTATTTTTAAACTCAG	9178	False	NA	NA	False	AATAAA	-6	NA	120102553	120102958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120102600_120103000
ES.29365.1	chr6	-	159	1	Intergenic	novelGene_24351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	120142843	120142684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120142700_120142800
ES.29366.1	chr6	+	1771	1	Intergenic	novelGene_24352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGAGGGTCTGTTTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	120162439	120164210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120162400_120164200
ES.29367.1	chr6	+	1028	1	Intergenic	novelGene_24355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AAAAAG	-36	NA	120203878	120204906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120203900_120204900
ES.29367.2	chr6	+	377	1	Intergenic	novelGene_24356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCACAAGAGAAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	120204669	120205046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120204700_120205000
ES.29368.1	chr6	+	2065	1	Intergenic	novelGene_24357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120256012	120258077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120256000_120258100
ES.29369.1	chr6	+	188	1	Intergenic	novelGene_24358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGAAAAACCAGAGAC	NA	False	NA	NA	False	NA	NA	NA	120269255	120269443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120269300_120269400
ES.2937.1	chr10	-	196	1	Intergenic	novelGene_2261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCAAGACCTCTGCCTG	NA	False	NA	NA	False	NA	NA	NA	62384262	62384066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62384100_62384300
ES.29370.1	chr6	-	6404	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-385	-3061	-385	2324	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTCATGTACATTAAT	NA	False	NA	2	True	NA	NA	NA	120271905	120177709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.10	chr6	-	4222	1	Genic_Genomic	ENSMUSG00000041372.11	novel	NA	NA	NA	NA	37662	2313	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	6533	False	NA	-9	True	NA	NA	NA	120181942	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_120177700_120181900
ES.29370.12	chr6	-	1602	2	Intergenic	novelGene_24353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	8582	False	NA	-9	True	NA	NA	NA	120179893	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120177827_120178397
ES.29370.14	chr6	-	3673	8	NNC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	27668	2313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5454776540081	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	NA	False	NA	-9	True	NA	NA	NA	120191936	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120177839_120178378_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707
ES.29370.16	chr6	-	4721	21	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-378	2313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7991572834222	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	NA	False	NA	-9	True	NA	NA	NA	120271898	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120178096_120179763_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.18	chr6	-	2370	15	NNC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	-338	2313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.6580397946727	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	NA	False	NA	-9	True	NA	NA	NA	120271858	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120177839_120191820_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.19	chr6	-	2590	2	NNC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	38732	2313	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTAATGTGTTTCA	7603	False	NA	-9	True	NA	NA	NA	120180872	120177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120177829_120178390
ES.29370.20	chr6	-	5153	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	-398	-1078	-398	1057	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTTTCCTTCTTGCC	NA	False	NA	NA	False	ATTAAA	-21	NA	120271918	120178976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.22	chr6	-	5026	19	NIC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-336	1057	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	17.2119144780585	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTTTCCTTCTTGCC	NA	False	NA	NA	False	ATTAAA	-21	NA	120271856	120178976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.23	chr6	-	5226	11	NIC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	20133	1057	intron_retention	FALSE	canonical	3	28	junction_7	13.908270920571	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGTTTCCTTCTTGCC	NA	False	NA	NA	False	ATTAAA	-21	NA	120199471	120178976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120194527_120195828_120195973_120199024_120199092_120199233
ES.29370.25	chr6	-	4900	20	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-370	1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.7484734625068	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCGGCTGTTTCCTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	120271890	120178979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186343_120187266_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.26	chr6	-	5024	19	NIC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-353	1054	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	18.1387825418016	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCGGCTGTTTCCTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	120271873	120178979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120209848_120209953_120271351
ES.29370.28	chr6	-	5045	20	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-280	1051	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_15	17.1512741505157	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCGGCTGTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	120271800	120178982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201157_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.29	chr6	-	6005	15	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-390	1050	intron_retention	FALSE	non_canonical	0	0	junction_1	24.2689017435222	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAAGCGGCTGTTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	120271910	120178983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183254_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120200630_120201036_120201138_120201505_120201559_120271741
ES.29370.3	chr6	-	5432	2	NNC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	36063	2320	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGTTTCATGTACAT	4934	False	NA	-2	True	NA	NA	NA	120183541	120177713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120181275
ES.29370.30	chr6	-	5065	20	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-340	1050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.7710672904542	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAAGCGGCTGTTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	120271860	120178983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193254_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.31	chr6	-	5020	20	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-336	1050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7172310762238	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAAGCGGCTGTTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	120271856	120178983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183500_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.32	chr6	-	5348	18	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	9682	1048	intron_retention	FALSE	canonical	0	0	junction_6	18.3470955999858	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACAAGCGGCTGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	120209922	120178985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191702_120192462_120193234_120193297_120193516_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848
ES.29370.33	chr6	-	3334	1	NIC	ENSMUSG00000041372.11	novel	3610	20	NA	NA	36216	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGAAATGCCCCTT	5087	False	NA	NA	False	NA	NA	NA	120183388	120180054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120180100_120183400
ES.29370.34	chr6	-	3691	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-338	-395	-338	-321	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCGTCTGGGGTCAAGC	NA	False	NA	NA	False	AATGAA	-18	NA	120271858	120180375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.36	chr6	-	3840	18	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-401	-1993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.4658140909286	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGTGTGTGTGTGTGTT	NA	False	NA	NA	False	AATATA	-10	NA	120271921	120182763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191702_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.37	chr6	-	3932	19	ISM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	-408	1994	-408	-1994	5prime_fragment	FALSE	canonical	3	34	junction_6	11.3747880186461	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTAGGGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATATA	-9	NA	120271928	120182764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.38	chr6	-	4066	12	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-382	-10318	intron_retention	FALSE	canonical	1	2	junction_7	20.4155183238083	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	120271902	120191088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120192465_120193234_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201157_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.39	chr6	-	181	1	Intergenic	novelGene_24354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAATTGGAAAAC	NA	False	NA	NA	False	NA	NA	NA	120197707	120197526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120197500_120197700
ES.29370.4	chr6	-	6112	20	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-155	2320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2012449727912	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGTTTCATGTACAT	NA	False	NA	-2	True	NA	NA	NA	120271675	120177713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120183500_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.40	chr6	-	1137	2	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-378	-89826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGAGTGGAGAAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	120271898	120270596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120271187_120271351
ES.29370.6	chr6	-	5807	21	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-404	2320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7991572834222	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGTTTCATGTACAT	NA	False	NA	-2	True	NA	NA	NA	120271924	120177713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120177834_120178448_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.7	chr6	-	5577	21	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-382	2319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5765497705263	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTGTTTCATGTACA	NA	False	NA	-3	True	NA	NA	NA	120271902	120177714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120177832_120178658_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191702_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.8	chr6	-	6518	21	NNC	ENSMUSG00000041372.11	novel	3677	20	NA	NA	-351	2318	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	21.1992924410226	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGTGTTTCATGTAC	NA	False	NA	-4	True	NA	NA	NA	120271871	120177715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120180880_120181275_120181427_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29370.9	chr6	-	6279	21	NNC	ENSMUSG00000041372.11	novel	2958	20	NA	NA	-340	2317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3233945865122	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAATGTGTTTCATGTA	NA	False	NA	-5	True	NA	NA	NA	120271860	120177716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120178391_120178463_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ES.29371.1	chr6	+	136	1	Intergenic	novelGene_24359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	120276028	120276164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120276000_120276200
ES.29372.1	chr6	+	208	1	Intergenic	novelGene_24360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGACAGGGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	120276211	120276419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120276200_120276400
ES.29373.1	chr6	-	155	1	Intergenic	novelGene_24361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3291	False	NA	NA	False	NA	NA	NA	120291637	120291482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120291500_120291600
ES.29374.1	chr6	+	403	1	Intergenic	novelGene_24362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCCAGTACTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	120328203	120328606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120328200_120328600
ES.29374.2	chr6	+	198	1	Intergenic	novelGene_24363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120328204	120328402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120328200_120328400
ES.29375.1	chr6	+	9333	30	NNC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-6593	-2317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.8801296881972	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGCACTTCTTCGTTA	NA	False	NA	15	True	ATTAAA	-30	NA	120334491	120419218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120334534_120340502_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.10	chr6	+	6660	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	11	4273	3	590	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTAAATGTCTCTG	NA	False	NA	NA	False	AGTAAA	-31	NA	120341095	120417262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.11	chr6	+	8267	30	NNC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	21	-2330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8801296881972	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGACTCCTCAAAGTTG	NA	False	NA	2	True	ATTAAA	-17	NA	120341113	120419205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120341224_120341623_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.12	chr6	+	5251	27	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	262	12194	-72	337	5prime_fragment	FALSE	canonical	3	38	junction_13	6.86093909075868	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGCGTTAACGGAAAAAG	NA	False	NA	NA	False	TATAAA	-23	NA	120341346	120409341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773
ES.29375.14	chr6	+	5863	27	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	276	11568	-58	963	5prime_fragment	FALSE	canonical	3	38	junction_13	6.86093909075868	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGCTCATGTAGTAACTT	NA	False	NA	NA	False	NA	NA	NA	120341360	120409967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773
ES.29375.15	chr6	+	6455	30	NNC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-42	13170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	12.8801296881972	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAACCTTTAATGGGCTG	NA	False	NA	NA	False	NA	NA	NA	120341376	120434705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947_120417239_120434687
ES.29375.16	chr6	+	7925	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-24	2047	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	12.6645798048199	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGGCTCTTCTGTACT	NA	False	NA	6	True	AATATA	-14	NA	120341394	120418719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376044_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.17	chr6	+	7648	27	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	25	2049	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	12.8540394958529	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTCTTCTGTACTTA	NA	False	NA	8	True	AATATA	-16	NA	120341443	120418721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.18	chr6	+	7104	24	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	17410	2814	6717	2049	3prime_fragment	FALSE	canonical	3	38	junction_9	7.41250157397089	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTCTTCTGTACTTA	NA	False	NA	8	True	AATATA	-16	NA	120358494	120418721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.19	chr6	+	6244	19	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	14842	2047	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	15.6781872534919	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGGCTCTTCTGTACT	2154	False	NA	6	True	AATATA	-14	NA	120366619	120418719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120408773_120409185_120415404_120415487_120415947
ES.29375.2	chr6	+	272	1	Intergenic	novelGene_24364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAGAATAACAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	120335284	120335556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120335300_120335600
ES.29375.23	chr6	+	5492	7	NNC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-98	2046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.1108319357027	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTCGGCTCTTCTGTAC	9468	False	NA	5	True	AATATA	-13	NA	120404101	120418718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120404327_120404689_120404834_120405178_120406730_120406933_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.24	chr6	+	5530	5	NNC	ENSMUSG00000030180.16	novel	1295	4	NA	NA	575	2049	intron_retention	FALSE	non_canonical	0	0	junction_1	23.3933751305792	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCTCTTCTGTACTTA	NA	False	NA	8	True	AATATA	-16	NA	120404774	120418721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120406730_120406933_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.25	chr6	+	3263	3	ISM	ENSMUSG00000030180.16	ENSMUST00000142791.2	1295	4	1607	-2043	1607	2043	3prime_fragment	FALSE	canonical	3	31	junction_2	5.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCATTCGGCTCTTCTG	3549	False	NA	2	True	AATATA	-10	NA	120408771	120418715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120409185_120415404_120415487_120415947
ES.29375.26	chr6	+	2513	1	NIC	ENSMUSG00000030180.16	novel	1295	4	NA	NA	5874	-1121	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTCCTCTTCCTT	7816	False	NA	NA	False	AATAAA	-22	NA	120413038	120415551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120413000_120415600
ES.29375.27	chr6	+	4258	1	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	7300	2050	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTCTTCTGTACTTAT	9242	False	NA	9	True	AATATA	-17	NA	120414464	120418722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120414500_120418700
ES.29375.28	chr6	+	4050	2	ISM	ENSMUSG00000030180.16	ENSMUST00000142791.2	1295	4	7528	-2531	7528	-2332	3prime_fragment	FALSE	canonical	3	31	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGACTCCTCAAAGT	9470	False	NA	0	True	ATTAAA	-15	NA	120414692	120419203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120415487_120415947
ES.29375.29	chr6	+	3748	1	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	8294	-2329	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCCTCAAAGTTGC	NA	False	NA	3	True	ATTAAA	-18	NA	120415458	120419206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120415500_120419200
ES.29375.3	chr6	+	8247	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-34	2050	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTCTTCTGTACTTAT	NA	False	NA	9	True	AATATA	-17	NA	120341050	120418722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.30	chr6	+	1899	1	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	74939	3613	8859	1250	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGATGTACTGTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	120416023	120417922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120416000_120417900
ES.29375.31	chr6	+	4358	1	ISM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	76091	2	10011	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAAAGCTGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	120417175	120421533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120417200_120421500
ES.29375.32	chr6	+	166	1	Intergenic	novelGene_24368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTAG	4513	False	NA	NA	False	NA	NA	NA	120423924	120424090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120423900_120424100
ES.29375.4	chr6	+	8111	28	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-33	2050	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	12.5648932828686	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTCTTCTGTACTTAT	NA	False	NA	9	True	AATATA	-17	NA	120341051	120418722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.5	chr6	+	8655	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	-25	2314	-25	-2314	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCACTTCTTCGTTATTA	NA	False	NA	18	True	ATTAAA	-33	NA	120341059	120419221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.6	chr6	+	8154	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	-23	2813	-23	2050	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTCTTCTGTACTTAT	NA	False	NA	9	True	AATATA	-17	NA	120341061	120418722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.7	chr6	+	8014	27	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-23	2045	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	12.0229686495445	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTCGGCTCTTCTGTA	NA	False	NA	4	True	AATATA	-12	NA	120341061	120418717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ES.29375.8	chr6	+	6746	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-5	578	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTTACTTTTTTC	NA	False	NA	NA	False	AGTAAA	-19	NA	120341079	120417250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29375.9	chr6	+	7225	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	-1	1069	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTCTAAAAATGGTGTT	NA	False	NA	NA	False	AATATA	-17	NA	120341091	120417741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
ES.29376.1	chr6	+	3963	12	NNC	ENSMUSG00000002897.6	novel	4804	11	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.3052582261406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCATAGTTGTTATTGAA	263	False	NA	5	True	AATAAA	-18	NA	120440158	120460690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455331_120455444_120456963_120457006_120457943
ES.29376.2	chr6	+	4772	12	NNC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-40	2	intron_retention	FALSE	canonical	0	0	junction_9	10.9408628242403	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAGTTGTTATTGAATC	272	False	NA	7	True	AATAAA	-20	NA	120440167	120460692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120440428_120449052_120449078_120449886_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455264_120455335_120455444_120456963_120457006_120457943
ES.29376.3	chr6	+	4634	11	NNC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-40	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	10.6939235082359	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTTGTTATTGA	272	False	NA	4	True	AATAAA	-17	NA	120440167	120460689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120440428_120449052_120449078_120449886_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455331_120455444_120456963_120457006_120457943
ES.29376.5	chr6	+	3924	11	NNC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.5063983624383	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTCATAGTTGTTA	288	False	NA	0	True	AATAAA	-13	NA	120440183	120460685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120440436_120449878_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455331_120455444_120456963_120457006_120457943
ES.29376.6	chr6	+	4824	11	FSM	ENSMUSG00000002897.6	ENSMUST00000204239.3	4804	11	-23	3	-23	-3	multi-exon	FALSE	canonical	3	21	junction_6	5.91607978309962	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTCATAGTTGTTATT	289	False	NA	2	True	AATAAA	-15	NA	120440184	120460687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120455444_120456963_120457006_120457943
ES.29376.7	chr6	+	4138	12	NIC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	-20	-3	intron_retention	FALSE	canonical	1	13	junction_9	7.46340936428138	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTCATAGTTGTTATT	292	False	NA	2	True	AATAAA	-15	NA	120440187	120460687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455444_120456963_120457006_120457943
ES.29377.1	chr6	-	4791	2	ISM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	27637	-2921	20598	2921	intron_retention	FALSE	canonical	3	317	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGACTCCGTTGCTA	NA	False	NA	NA	False	NA	NA	NA	120306753	120298362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120302455_120306054
ES.29377.10	chr6	-	3479	8	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	2637	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	125.492661790502	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120324714	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319150_120323203
ES.29377.11	chr6	-	2800	12	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	85.7515149373443	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120341330	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120341034
ES.29377.12	chr6	-	2379	11	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	87.1484365895338	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120334308	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.13	chr6	-	2617	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	-10	3	-10	-3	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120334400	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.14	chr6	-	3360	9	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	2976	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	92.1261872379401	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120324375	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319150_120323203
ES.29377.16	chr6	-	3088	6	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	10909	-6	intron_retention	FALSE	canonical	3	11	junction_3	108.587292074165	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120316442	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308910_120308993_120311729_120311879_120315029
ES.29377.17	chr6	-	2306	9	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-7	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	103.302952523149	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334345	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.19	chr6	-	2342	10	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	90.9144218414517	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334338	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.2	chr6	-	2606	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	5	-724	5	12	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGTCTCGTGCTTGTTC	NA	False	NA	-2	True	AATAAA	-30	NA	120334428	120301271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.20	chr6	-	3778	11	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	3285	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	87.6458783971043	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120331016	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319150_120324137_120325492_120327167_120327352_120330961
ES.29377.21	chr6	-	2431	12	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	106.781076727609	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334332	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315098_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.22	chr6	-	5287	11	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_4	111.716113430427	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334338	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120311879_120314985_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.23	chr6	-	2500	12	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	82.5612720127521	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334332	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.24	chr6	-	2277	11	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	86.5115021254399	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334337	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.25	chr6	-	2510	11	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	3285	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	92.2854809815715	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120331016	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327406_120330961
ES.29377.26	chr6	-	2483	11	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	5	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	93.2963557702014	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334333	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.27	chr6	-	2139	8	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	110.168331313903	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334327	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.28	chr6	-	2385	10	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	96.8692640675444	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	False	NA	-20	True	AATAAA	-12	NA	120334327	120301289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.29	chr6	-	2109	10	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	1	-15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	91.9095099796063	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGTTTAAAACATCTCA	NA	False	NA	-29	True	AATAAA	-3	NA	120334327	120301298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.3	chr6	-	2627	13	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	104.365543483789	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334377	120301281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120328654_120328683_120330961_120331016_120334287
ES.29377.30	chr6	-	2123	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	102	-338	-3	338	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAAACAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	120334331	120301657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.31	chr6	-	1764	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	-55	901	-12	-189	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTCACACCTATAATCC	NA	False	NA	NA	False	AATAAA	-19	NA	120334445	120302184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ES.29377.32	chr6	-	1613	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	82	192	-13	-192	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAGCTCACACCTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	120334351	120302187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.33	chr6	-	2784	12	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	-4	-331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.3545253700904	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCGCTTAGGCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	120334332	120302326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319157_120324145_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.34	chr6	-	2051	1	NIC	ENSMUSG00000030177.15	novel	2458	10	NA	NA	2	-8644	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCAACAAAAGAAGCAACTT	NA	False	NA	NA	False	NA	NA	NA	120341315	120339264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120339300_120341300
ES.29377.4	chr6	-	2524	11	NIC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	124.889591239623	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120341315	120301281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120341034
ES.29377.5	chr6	-	2873	12	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	85.5177715811067	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334309	120301281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120333945
ES.29377.6	chr6	-	2350	12	NNC	ENSMUSG00000030177.15	novel	1887	12	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	80.9593306737432	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTCTACAAAGTCTC	NA	False	NA	-12	True	AATAAA	-20	NA	120334320	120301281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308910_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ES.29377.7	chr6	-	6010	4	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	15470	0	intron_retention	FALSE	non_canonical	0	0	junction_1	130.866344030847	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120311881	120301283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120303083_120305231_120306208_120306294_120306421_120308772
ES.29377.8	chr6	-	4286	8	ISM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	13146	0	6107	0	3prime_fragment	FALSE	canonical	3	239	junction_4	22.3652427134751	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120321244	120301283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933
ES.29377.9	chr6	-	2418	12	NNC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	82.8397836312126	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCAGGGCTCTACAAA	NA	False	NA	-17	True	AATAAA	-15	NA	120334337	120301286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327270_120330961_120331016_120334287
ES.29378.1	chr6	-	407	1	Intergenic	novelGene_24365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	120347300	120346893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120346900_120347300
ES.29378.10	chr6	-	175	2	Antisense	novelGene_ENSMUSG00002075013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	120534393	120406755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120406771_120534233
ES.29378.11	chr6	-	4120	1	Antisense	novelGene_ENSMUSG00000030180.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTCTTCCCAGAATCCA	NA	False	NA	NA	False	NA	NA	NA	120420949	120416829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120416800_120420900
ES.29378.12	chr6	-	230	2	Antisense	novelGene_ENSMUSG00002075013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	451	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTGGCTTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	120543189	120432471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120432525_120543012
ES.29378.13	chr6	-	139	1	Intergenic	novelGene_24369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	120434462	120434323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120434300_120434500
ES.29378.14	chr6	-	3179	2	Antisense	novelGene_ENSMUSG00000002897.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTGAGCAAATGAGAATA	NA	False	NA	NA	False	NA	NA	NA	120449929	120445944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120449085_120449890
ES.29378.15	chr6	-	162	1	Intergenic	novelGene_24370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8421	False	NA	NA	False	NA	NA	NA	120465092	120464930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120464900_120465100
ES.29378.16	chr6	-	214	1	Intergenic	novelGene_24371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGTGAAAACCAA	784	False	NA	NA	False	NA	NA	NA	120472729	120472515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120472500_120472700
ES.29378.17	chr6	-	171	1	Intergenic	novelGene_24372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGCAAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	120474778	120474607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120474600_120474800
ES.29378.18	chr6	-	5744	6	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	239	junction_2	8.68101376568428	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508256	120486454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487424_120487591_120487781_120491358_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.19	chr6	-	3731	3	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	14628	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.5	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	353	False	NA	34	True	ATTAAA	-20	NA	120493623	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487781_120488911_120489053_120491358
ES.29378.2	chr6	-	156	2	Antisense	novelGene_ENSMUSG00002075013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120543186	120347143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120347177_120543063
ES.29378.20	chr6	-	1961	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	-34	1	-34	-1	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508314	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.21	chr6	-	5586	5	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	4	junction_1	105.750886521107	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508288	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487424_120491358_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.22	chr6	-	1932	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	84.2360628573907	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508271	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495390_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.23	chr6	-	2184	7	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	111.42959909986	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508259	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120495404_120495499_120498154_120498268_120500366_120500571_120507818
ES.29378.24	chr6	-	2021	9	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	100.959691832929	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508278	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120500907_120501004_120508127
ES.29378.25	chr6	-	1825	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.881857733512	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508278	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487669_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498280_120500366_120500571_120508127
ES.29378.27	chr6	-	1777	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-39	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	87.406457935835	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508319	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487424_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.28	chr6	-	5851	1	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	15945	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	1670	False	NA	34	True	ATTAAA	-20	NA	120492306	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120486500_120492300
ES.29378.29	chr6	-	2215	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	78.843425307921	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508259	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120507818
ES.29378.3	chr6	-	175	1	Intergenic	novelGene_24366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	9490	False	NA	NA	False	NA	NA	NA	120354869	120354694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120354700_120354900
ES.29378.30	chr6	-	1882	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	77.5305074911595	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508281	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487378_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.31	chr6	-	5722	6	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	18	junction_1	91.3135258327045	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508281	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487378_120487591_120487781_120491358_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.32	chr6	-	5933	5	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	239	junction_1	9.70502447189084	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508278	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487781_120491358_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.33	chr6	-	2075	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	207	junction_2	17.2086864370552	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508260	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.34	chr6	-	2248	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	105.00165207641	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508278	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495390_120495499_120498154_120498268_120500366_120500571_120507818
ES.29378.35	chr6	-	4581	7	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	207	junction_3	17.591822595235	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	False	NA	34	True	ATTAAA	-20	NA	120508278	120486455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120498268_120500366_120500571_120508127
ES.29378.36	chr6	-	2136	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.788072046819	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTGTCTTGTGAGGA	NA	False	NA	33	True	ATTAAA	-19	NA	120508259	120486456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120487378_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120507850
ES.29378.37	chr6	-	958	7	NNC	ENSMUSG00000058979.8	novel	1882	3	NA	NA	-1	-3388	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	80.8386596183341	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	120508281	120489842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120490030_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.38	chr6	-	885	5	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	0	-4772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.47674167	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATGTGTTGAGTGGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	120508280	120491226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120491534_120495390_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.39	chr6	-	2540	1	NIC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	14484	-4773	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGATGTGTTGAGTGGT	209	False	NA	NA	False	ATTAAA	-23	NA	120493767	120491227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120491200_120493800
ES.29378.4	chr6	-	213	1	Intergenic	novelGene_24367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGTGAAAAACAACAAAA	NA	False	NA	NA	False	AATGAA	-7	NA	120369532	120369319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120369300_120369500
ES.29378.40	chr6	-	873	6	ISM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	25	4776	-4	-4776	5prime_fragment	FALSE	canonical	3	207	junction_1	18.740330840196	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGGAGATGTGTTGAGT	NA	False	NA	NA	False	ATTAAA	-20	NA	120508255	120491230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ES.29378.41	chr6	-	168	1	Intergenic	novelGene_24373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	9084	False	NA	NA	False	NA	NA	NA	120522224	120522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120522100_120522200
ES.29378.42	chr6	-	165	2	Antisense	novelGene_ENSMUSG00000107744.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	196	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	120543187	120522056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120522107_120543072
ES.29378.43	chr6	-	180	1	Intergenic	novelGene_24374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534394	120534214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120534200_120534400
ES.29378.44	chr6	-	155	1	Intergenic	novelGene_24375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	120543187	120543032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120543000_120543200
ES.29378.5	chr6	-	1160	4	Antisense	novelGene_ENSMUSG00000030180.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120389247	120382182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120382944_120383533_120383679_120385198_120385319_120389113
ES.29378.6	chr6	-	548	4	Antisense	novelGene_ENSMUSG00000030180.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAAAAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	120389247	120382795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120382944_120383533_120383684_120385202_120385319_120389113
ES.29378.8	chr6	-	173	2	Antisense	novelGene_ENSMUSG00002075013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	120543187	120406755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120406771_120543029
ES.29378.9	chr6	-	177	1	Antisense	novelGene_ENSMUSG00000030180.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	120406932	120406755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120406800_120406900
ES.29379.1	chr6	+	177	1	Intergenic	novelGene_24376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120571188	120571365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120571200_120571400
ES.2938.1	chr10	+	174	1	Intergenic	novelGene_2262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTTTTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	62390830	62391004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62390800_62391000
ES.29380.1	chr6	-	179	1	Intergenic	novelGene_24377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATAACT	NA	False	NA	NA	False	NA	NA	NA	120600006	120599827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120599800_120600000
ES.29381.1	chr6	-	173	1	Intergenic	novelGene_24378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATTAAAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	120601495	120601322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120601300_120601500
ES.29382.1	chr6	+	155	1	Intergenic	novelGene_24379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	5434	False	NA	NA	False	NA	NA	NA	120611156	120611311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120611200_120611300
ES.29383.1	chr6	-	492	1	Intergenic	novelGene_24380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAACTAAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	120624725	120624233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120624200_120624700
ES.29383.2	chr6	-	174	1	Intergenic	novelGene_24381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120624733	120624559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120624600_120624700
ES.29384.1	chr6	-	6429	1	Intergenic	novelGene_24382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGGAGGACAGCTGT	NA	False	NA	NA	False	NA	NA	NA	120643052	120636623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120636600_120643100
ES.29385.1	chr6	+	6160	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-404	-907	-191	907	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGGAATATGATTTTT	NA	False	NA	14	True	AATAAA	-32	NA	120643138	120744772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.11	chr6	+	7331	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-61	-1910	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGCCAGATTGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	120643268	120746241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.12	chr6	+	5632	19	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-59	561	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	36.7332728372158	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAAAGTATATCCTAT	NA	False	NA	NA	False	AATAAA	-19	NA	120643270	120744426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711565_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.13	chr6	+	7829	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-59	-1494	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCAGACTTTTTTTTT	NA	False	NA	80	True	NA	NA	NA	120643270	120746657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.14	chr6	+	5939	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-59	902	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120643270	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.15	chr6	+	5977	19	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-59	907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.9661590320153	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGGAATATGATTTTT	NA	False	NA	14	True	AATAAA	-32	NA	120643270	120744772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738068_120739519_120742232_120742345_120743372
ES.29385.16	chr6	+	7278	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-272	-2157	-59	-2129	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGAGCCTTTTAGAG	NA	False	NA	NA	False	AATAAA	-14	NA	120643270	120746022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.17	chr6	+	9407	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-272	-4286	-59	0	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCGTGTATGTG	NA	False	NA	4	True	TATAAA	-17	NA	120643270	120748151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.18	chr6	+	7914	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-272	-2793	-59	-1493	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCAGACTTTTTTTTTT	NA	False	NA	81	True	NA	NA	NA	120643270	120746658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.19	chr6	+	6338	20	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-59	966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.5568212327332	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGCCCTAGTATCTTA	NA	False	NA	73	True	ATTAAA	-5	NA	120643270	120744831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120673097_120673352_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.2	chr6	+	9290	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-108	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTTCGTGTATGTGCC	NA	False	NA	6	True	TATAAA	-19	NA	120643221	120748153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.21	chr6	+	4788	18	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-45	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.8445074644738	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGGAAAGTATATCCTA	NA	False	NA	NA	False	AATAAA	-18	NA	120643284	120744425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120735486_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.22	chr6	+	5839	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-45	900	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	7	True	AATAAA	-25	NA	120643284	120744765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.23	chr6	+	6113	19	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-40	883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	36.3077126792642	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCCTGGAGTTTCAAG	NA	False	NA	-10	True	AATAAA	-8	NA	120643289	120744748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734395_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.24	chr6	+	9305	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-40	4	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	30.8887948463326	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTCGTGTATGTGCCTG	NA	False	NA	8	True	TATAAA	-21	NA	120643289	120748155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.25	chr6	+	7716	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-34	-1495	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	32.559447892414	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTCAGACTTTTTTTT	NA	False	NA	79	True	NA	NA	NA	120643295	120746656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.26	chr6	+	6222	2	FSM	ENSMUSG00000071226.12	ENSMUST00000148346.2	4392	2	-33	-1797	-33	1797	multi-exon	FALSE	canonical	3	129	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTGACATTGTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	120643296	120703678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828
ES.29385.27	chr6	+	5576	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-33	565	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTATATCCTATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	120643296	120744430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.29	chr6	+	9299	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-83	-4	-31	4	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTCGTGTATGTGCCTG	NA	False	NA	8	True	TATAAA	-21	NA	120643298	120748155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.3	chr6	+	5656	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-160	3716	-108	570	multi-exon	TRUE	canonical	3	53	junction_14	26.8930781860498	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATCCTATAGATTTAAA	NA	False	NA	NA	False	AATAAA	-28	NA	120643221	120744435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.30	chr6	+	7072	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-21	-2129	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGAGCCTTTTAGAG	NA	False	NA	NA	False	AATAAA	-14	NA	120643308	120746022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.31	chr6	+	6099	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-17	900	intron_retention	FALSE	canonical	3	61	junction_15	25.8127406110756	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	7	True	AATAAA	-25	NA	120643312	120744765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.33	chr6	+	5909	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-12	900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.0876739201531	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	7	True	AATAAA	-25	NA	120643317	120744765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120712328_120712348_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.35	chr6	+	5318	19	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-12	895	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	38.4653523750054	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAAGTCTTTGTAAAGG	NA	False	NA	2	True	AATAAA	-20	NA	120643317	120744760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120734923_120735486_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.38	chr6	+	5668	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	0	777	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	32.559447892414	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCTCCCTGTTTAGCC	NA	False	NA	NA	False	ATTAAA	-34	NA	120643329	120744642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.39	chr6	+	5533	18	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	0	567	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	40.0514375155103	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATATCCTATAGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	120643329	120744432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732593_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.4	chr6	+	5993	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-160	3379	-108	907	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGGAATATGATTTTT	NA	False	NA	14	True	AATAAA	-32	NA	120643221	120744772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.41	chr6	+	5400	20	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	0	902	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	33.93622828229	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120643329	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120734923_120735486_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.42	chr6	+	5310	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	3	902	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.1989730651234	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120643332	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120734923_120735486_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.43	chr6	+	7349	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-49	1912	3	-1912	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGAGCCAGATTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	120643332	120746239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.44	chr6	+	5958	14	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	7	1592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.2746834171213	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTCTAACACTGTAAGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	120643336	120745457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120731635_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.46	chr6	+	8522	13	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43.340704501273	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAAGGCTTTCGTGTATG	NA	False	NA	2	True	TATAAA	-15	NA	120643336	120748149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.47	chr6	+	4936	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-43	4319	9	-33	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTAATTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120643338	120743832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.48	chr6	+	7759	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-41	1494	11	-1494	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCAGACTTTTTTTTT	NA	False	NA	80	True	NA	NA	NA	120643340	120746657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.5	chr6	+	7452	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-101	-1910	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	30.8887948463326	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGCCAGATTGGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	120643228	120746241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.51	chr6	+	8259	14	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	11	1223	intron_retention	FALSE	canonical	0	0	junction_1	47.649981217826	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGACAGTGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120643340	120739901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120673097_120673352_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509
ES.29385.52	chr6	+	5636	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	11	893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.7295272464151	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTCAAGTCTTTGTAAA	NA	False	NA	0	True	AATAAA	-18	NA	120643340	120744758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735263_120735486_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.53	chr6	+	4999	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-201	51	12	-51	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTTTCATGTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	120643341	120743814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.54	chr6	+	5905	19	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	12	905	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	36.7332728372158	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAAAGGAATATGATTT	NA	False	NA	12	True	AATAAA	-30	NA	120643341	120744770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711565_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.55	chr6	+	6572	19	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	12	1609	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	28.4433593543032	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGCCTGTTGTGTCCTG	NA	False	NA	NA	False	ATTAAA	-40	NA	120643341	120745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.57	chr6	+	5080	19	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	17	899	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	36.2927483148757	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTCTTTGTAAAGGAATA	NA	False	NA	6	True	AATAAA	-24	NA	120643346	120744764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120735555_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.58	chr6	+	5753	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	18	793	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCTGTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	120643347	120744658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.59	chr6	+	5067	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	26	-1571	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	36.7295272464151	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAGTCTTAAACACACA	NA	False	NA	3	True	ATTAAA	-15	NA	120643355	120746580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372_120743833_120746432
ES.29385.6	chr6	+	5721	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-300	-572	-87	572	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCTATAGATTTAAATT	NA	False	NA	NA	False	AATAAA	-30	NA	120643242	120744437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.61	chr6	+	7402	19	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-21	-1912	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	26.6106471775843	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGAGCCAGATTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	120643360	120746239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.64	chr6	+	5805	19	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-8	790	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	26.6106471775843	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTTCTGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	120643373	120744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.65	chr6	+	5188	19	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-8	902	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	38.6612783601945	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120643373	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120734923_120735486_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.68	chr6	+	8059	19	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	47.7155926063774	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTTTCGTGTATGTGC	NA	False	NA	5	True	TATAAA	-18	NA	120643373	120748152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732562_120734824_120734923_120735486_120735593_120738104_120739519_120742232_120742345_120743372_120744538_120744609
ES.29385.69	chr6	+	6503	19	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-4	1586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.0616861153192	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAGTTCTAACACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	120643377	120745451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715283_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731615_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.71	chr6	+	4925	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-1	562	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	35.1990776761562	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAAAGTATATCCTATA	NA	False	NA	NA	False	AATAAA	-20	NA	120643380	120744427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120734923_120735486_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.74	chr6	+	7030	20	NNC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	55	-1560	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.1989730651234	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACACAAATGTCCCAAT	NA	False	NA	14	True	ATTAAA	-26	NA	120643436	120746591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120734923_120735486_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.76	chr6	+	4652	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	21	-52	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	32.559447892414	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGTTTCATGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	120643516	120743813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.77	chr6	+	6308	16	ISM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	66187	-902	-1789	902	3prime_fragment	FALSE	canonical	3	70	junction_11	26.0140133176119	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120709729	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.78	chr6	+	6694	12	ISM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	75388	-902	6214	902	3prime_fragment	FALSE	canonical	3	70	junction_7	28.1557063781553	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTGTAAAGGAATATGA	NA	False	NA	9	True	AATAAA	-27	NA	120718930	120744767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.79	chr6	+	7997	10	NNC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-5479	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.2960085996739	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTAGTAAGGCTTTCGT	NA	False	NA	-3	True	TATAAA	-10	NA	120729616	120748144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734782_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.8	chr6	+	5838	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-122	3496	-70	790	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCTTCTGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	120643259	120744655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.81	chr6	+	4252	6	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	-1587	900	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	41.4555183298919	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTGTAAAGGAATAT	NA	False	NA	7	True	AATAAA	-25	NA	120733508	120744765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.82	chr6	+	4721	6	ISM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	90185	-1585	-1368	1585	3prime_fragment	FALSE	canonical	3	70	junction_1	37.4934660974416	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATTAAGTTCTAACACT	NA	False	NA	NA	False	ATTAAA	-16	NA	120733727	120745450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.83	chr6	+	4149	5	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-1196	560	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	39.3533670732251	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGGAAAGTATATCCTA	NA	False	NA	NA	False	AATAAA	-18	NA	120733899	120744425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
ES.29385.84	chr6	+	7255	5	ISM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	91144	-3	-570	3	3prime_fragment	FALSE	canonical	3	78	junction_2	32.5729949498047	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTCGTGTATGTGCCT	NA	False	NA	7	True	TATAAA	-20	NA	120734525	120748154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29385.85	chr6	+	2196	1	ISM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	100815	1759	9101	-1759	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCGTGGTCTCCTCCA	1442	False	NA	NA	False	ATTAAA	-17	NA	120744196	120746392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120744200_120746400
ES.29385.9	chr6	+	5522	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	-61	567	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATATCCTATAGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	120643268	120744432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ES.29386.1	chr6	-	213	1	Intergenic	novelGene_24383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGGGGGGGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	120660393	120660180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120660200_120660400
ES.29387.1	chr6	-	283	1	Intergenic	novelGene_24384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGGTGAAATTAAG	NA	False	NA	NA	False	NA	NA	NA	120674551	120674268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120674300_120674600
ES.29388.1	chr6	-	4211	1	Antisense	novelGene_ENSMUSG00000071226.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120713866	120709655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120709700_120713900
ES.29389.1	chr6	-	157	1	Intergenic	novelGene_24385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	120718577	120718420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120718400_120718600
ES.2939.1	chr10	+	183	1	Intergenic	novelGene_2263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62407716	62407899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62407700_62407900
ES.29390.1	chr6	-	177	1	Intergenic	novelGene_24386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	120761062	120760885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120760900_120761100
ES.29391.1	chr6	+	173	1	Intergenic	novelGene_24387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	978	False	NA	NA	False	NA	NA	NA	120777500	120777673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120777500_120777700
ES.29392.1	chr6	-	2157	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	94	-939	-7	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTCAGTGTACAATT	NA	False	NA	NA	False	NA	NA	NA	120799660	120771265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ES.29392.2	chr6	-	1331	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	-18	-1	-18	1	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTTGTTCCTTATGT	NA	False	NA	-2	True	ATTAAA	-20	NA	120799772	120772203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ES.29392.3	chr6	-	4830	8	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_4	351.705930038846	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799673	120772204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120782972_120783491_120784614_120785322_120785433_120795294_120795361_120799548
ES.29392.4	chr6	-	2016	8	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	348.047967606625	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTGTTGTTCCTTAT	NA	False	NA	-4	True	ATTAAA	-18	NA	120799631	120772205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120782031_120785364_120785433_120795294_120795361_120799548
ES.29392.5	chr6	-	3431	6	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	-4328	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	426.788472196708	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTGTTGTTCCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	120783711	120772206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120781629_120782111_120782980_120783210
ES.29392.6	chr6	-	4106	6	NNC	ENSMUSG00000019210.11	novel	1312	9	NA	NA	-5183	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	353.155716363193	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTGTTGTTCCTTA	NA	False	NA	-5	True	ATTAAA	-17	NA	120784566	120772206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120782980_120783207
ES.29392.7	chr6	-	1851	4	ISM	ENSMUSG00000019210.11	ENSMUST00000203432.2	731	5	-53	2386	-46	1456	5prime_fragment	FALSE	canonical	3	983	junction_1	55.4035698809703	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCCATCTCTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	120799699	120783089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120784614_120785322_120785433_120795294_120795361_120799548
ES.29392.8	chr6	-	2464	3	NIC	ENSMUSG00000019210.11	novel	731	5	NA	NA	-6	1400	intron_retention	FALSE	canonical	3	1099	junction_2	1.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120799659	120783145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120785433_120795294_120795361_120799548
ES.29393.1	chr6	+	174	1	Intergenic	novelGene_24388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTTGTGT	7155	False	NA	NA	False	NA	NA	NA	120801221	120801395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120801200_120801400
ES.29394.1	chr6	+	179	1	Intergenic	novelGene_24389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	120807450	120807629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120807400_120807600
ES.29395.1	chr6	+	175	1	Intergenic	novelGene_24390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGAGCTTTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	120809741	120809916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120809700_120809900
ES.29396.1	chr6	+	6985	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-56	-4	-30	4	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCATCTTTTTGTCCAC	NA	False	NA	21	True	AATAAA	-22	NA	120813142	120869807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.10	chr6	+	2847	5	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	5	-3834	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.0730037665734	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTGATGTTTTGAATG	NA	False	NA	15	True	AATAAA	-26	NA	120813177	120865969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120813319_120825416_120825578_120847726_120847797_120853163_120853308_120863638
ES.29396.11	chr6	+	6936	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	74.551436382317	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGACTCATCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	120813177	120869801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853300_120863638
ES.29396.12	chr6	+	3189	8	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	5	-3839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.0800097872181	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAAGACCTGATGTTTT	NA	False	NA	10	True	AATAAA	-21	NA	120813177	120865964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842199_120842282_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.13	chr6	+	3043	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	6	-3837	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	75.5036790862244	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGACCTGATGTTTTGA	NA	False	NA	12	True	AATAAA	-23	NA	120813178	120865966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825513_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.14	chr6	+	3030	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	6	-3835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.294783705557	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACCTGATGTTTTGAAT	NA	False	NA	14	True	AATAAA	-25	NA	120813178	120865968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825513_120839815_120839924_120842543_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.15	chr6	+	2695	4	FSM	ENSMUSG00000009112.5	ENSMUST00000204004.2	2710	4	6	9	6	-9	multi-exon	FALSE	canonical	3	188	junction_2	18.3545331972483	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGACCATATAATGTTT	NA	False	NA	NA	False	NA	NA	NA	120813178	120844814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528
ES.29396.16	chr6	+	4150	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-20	2795	6	-2795	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCAAAAGCCTGTGAGG	NA	False	NA	NA	False	AATGAA	-15	NA	120813178	120867008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.18	chr6	+	3278	8	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-6	-3842	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.4886220295261	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACCAAGACCTGATGT	NA	False	NA	7	True	AATAAA	-18	NA	120813180	120865961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120820098_120820276_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.19	chr6	+	3003	8	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-3	-3842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	72.8148336535901	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACCAAGACCTGATGT	NA	False	NA	7	True	AATAAA	-18	NA	120813183	120865961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638_120864207_120864301
ES.29396.2	chr6	+	3076	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-29	-3834	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	84.4454853737013	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTGATGTTTTGAATG	NA	False	NA	15	True	AATAAA	-26	NA	120813143	120865969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120853163_120853308_120863638
ES.29396.21	chr6	+	2855	8	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	1	-3841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	72.8148336535901	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCAAGACCTGATGTT	NA	False	NA	8	True	AATAAA	-19	NA	120813187	120865962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638_120863981_120864220
ES.29396.22	chr6	+	3111	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	1	-3842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	97.1167682054271	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACCAAGACCTGATGT	NA	False	NA	7	True	AATAAA	-18	NA	120813187	120865961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120861307_120861433_120863638
ES.29396.24	chr6	+	3953	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-11	2983	1	-2983	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGAGTCACTGTGCCAT	NA	False	NA	NA	False	NA	NA	NA	120813187	120866820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.25	chr6	+	2911	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	12338	-3841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.6827347419526	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCAAGACCTGATGTT	7768	False	NA	8	True	AATAAA	-19	NA	120825536	120865962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120849090_120849158_120853163_120853308_120863638
ES.29396.26	chr6	+	3426	2	ISM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	39007	3841	39007	-3841	3prime_fragment	FALSE	canonical	3	214	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCAAGACCTGATGTT	NA	False	NA	8	True	AATAAA	-19	NA	120852205	120865962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_120853308_120863638
ES.29396.27	chr6	+	9009	1	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	47594	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGACTCATCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	120860792	120869801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120860800_120869800
ES.29396.3	chr6	+	3136	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-41	3830	-15	-3830	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTTGAATGTCCT	NA	False	NA	19	True	AATAAA	-30	NA	120813157	120865973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.4	chr6	+	3000	6	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-5	-3840	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	93.187982057774	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAAGACCTGATGTTT	NA	False	NA	9	True	AATAAA	-20	NA	120813167	120865963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853300_120863638
ES.29396.5	chr6	+	3112	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-4	-3835	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	74.551436382317	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACCTGATGTTTTGAAT	NA	False	NA	14	True	AATAAA	-25	NA	120813168	120865968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853300_120863638
ES.29396.6	chr6	+	3006	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	-4	-3841	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	77.7061130156438	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCAAGACCTGATGTT	NA	False	NA	8	True	AATAAA	-19	NA	120813168	120865962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.7	chr6	+	6840	6	NIC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	77.7061130156438	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGACTCATCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	120813172	120869800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_120813319_120825416_120825578_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.8	chr6	+	3071	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	2	-3832	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	73.4143491877894	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGATGTTTTGAATGTC	NA	False	NA	17	True	AATAAA	-28	NA	120813174	120865971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842574_120842686_120847726_120847797_120853163_120853308_120863638
ES.29396.9	chr6	+	3234	8	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	2	-3840	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.108409950848	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAAGACCTGATGTTT	NA	False	NA	9	True	AATAAA	-20	NA	120813174	120865963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120861307_120861433_120863638
ES.29397.1	chr6	+	1457	1	FSM	ENSMUSG00000108125.2	ENSMUST00000204935.2	318	1	-562	-577	-562	577	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATAACAAACT	NA	False	NA	NA	False	AGTAAA	-18	NA	120885071	120886528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120885100_120886500
ES.29397.2	chr6	+	2249	1	FSM	ENSMUSG00000108125.2	ENSMUST00000204935.2	318	1	-560	-1371	-560	1371	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAATTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120885073	120887322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_120885100_120887300
ES.29398.1	chr6	-	4136	2	Antisense	novelGene_ENSMUSG00000009112.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGATGGGTAGATTT	2875	False	NA	NA	False	NA	NA	NA	120819859	120815450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120818128_120818400
ES.29398.2	chr6	-	4164	2	Antisense	novelGene_ENSMUSG00000009112.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2875	False	NA	NA	False	NA	NA	NA	120819859	120815478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120818194_120818410
ES.29399.1	chr6	-	176	1	Intergenic	novelGene_24391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	120823810	120823634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120823600_120823800
ES.294.1	chr1	-	129	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36751055	36750926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36750900_36751100
ES.2940.1	chr10	-	2479	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	-8	1	-8	-1	multi-exon	FALSE	canonical	3	136	junction_2	17.3629554575891	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTATTACCTCTTT	8193	False	NA	-1	True	AATAAA	-21	NA	62414244	62394249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ES.2940.3	chr10	-	5702	6	NIC	ENSMUSG00000036955.17	novel	2472	7	NA	NA	-10	-18	intron_retention	FALSE	canonical	3	136	junction_1	18.9567929777165	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACTAAAAACTTAATA	8232	False	NA	-91	True	AATAAA	-14	NA	62414205	62394339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ES.29400.1	chr6	-	180	1	Intergenic	novelGene_24392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	120827158	120826978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120827000_120827200
ES.29401.1	chr6	-	176	1	Intergenic	novelGene_24393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTATGATATTG	NA	False	NA	NA	False	NA	NA	NA	120830997	120830821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120830800_120831000
ES.29402.1	chr6	-	2281	1	Antisense	novelGene_ENSMUSG00000009112.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGGAGTATAAATGCTA	NA	False	NA	NA	False	NA	NA	NA	120849259	120846978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_120847000_120849300
ES.29403.1	chr6	-	6403	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	27	-4241	10	3317	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATTTCATGATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	120893787	120865573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.10	chr6	-	1881	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-28	-243	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACCTAGTACATCAGA	NA	False	NA	-4	True	AATAAA	-38	NA	120893842	120870057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
ES.29403.11	chr6	-	6250	4	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	11997	243	-7288	-243	intron_retention	FALSE	canonical	3	883	junction_1	35.2798337108704	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACCTAGTACATCAGA	NA	False	NA	-4	True	AATAAA	-38	NA	120881817	120870057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116
ES.29403.12	chr6	-	3250	5	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	14	-264	intron_retention	FALSE	canonical	3	795	junction_4	65.9597415094996	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGAGAGCTGTATCTC	NA	False	NA	-25	True	AATAAA	-17	NA	120893783	120870078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120878750_120893694
ES.29403.13	chr6	-	4515	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-8932	-266	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	469.381720990496	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120883461	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120876441_120876596_120877328_120878683_120878750_120883389
ES.29403.15	chr6	-	4586	4	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	1	-266	intron_retention	FALSE	canonical	3	795	junction_3	105.173930018591	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893763	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.16	chr6	-	4165	5	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	12703	266	-6582	-266	3prime_fragment	FALSE	canonical	3	883	junction_1	61.0266335299597	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120881111	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683
ES.29403.17	chr6	-	2182	8	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	0	-266	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	472.407166131342	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893814	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120884222_120884347_120893694
ES.29403.18	chr6	-	2260	8	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8890	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	472.239907898776	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120884869	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120884119_120884347_120884774
ES.29403.19	chr6	-	1888	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-3	-266	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	383.658911013416	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893800	120870080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872600_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.2	chr6	-	5931	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	38	-3780	-12	2856	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAGAGCTTCTTTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	120893776	120866034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.20	chr6	-	2037	7	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	2	-268	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTGGGAGAGCTGTA	NA	False	NA	-29	True	AATAAA	-13	NA	120893795	120870082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
ES.29403.21	chr6	-	1892	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8894	-268	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.930964874214	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTGGGAGAGCTGTA	NA	False	NA	-29	True	AATAAA	-13	NA	120884865	120870082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884774
ES.29403.22	chr6	-	3405	6	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-23	-268	intron_retention	FALSE	canonical	3	32	junction_4	467.535838198528	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTGGGAGAGCTGTA	NA	False	NA	-29	True	AATAAA	-13	NA	120893837	120870082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
ES.29403.23	chr6	-	1877	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-15	-268	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	382.487333123595	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTGGGAGAGCTGTA	NA	False	NA	-29	True	AATAAA	-13	NA	120893779	120870082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872588_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.24	chr6	-	2156	8	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8888	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	472.239907898776	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTTGGGAGAGCTGT	NA	False	NA	-30	True	AATAAA	-12	NA	120884871	120870083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120884222_120884347_120884774
ES.29403.25	chr6	-	5904	3	NNC	ENSMUSG00000004446.13	novel	563	2	NA	NA	-3002	-269	intron_retention	FALSE	canonical	0	0	junction_2	484	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTTGGGAGAGCTGT	NA	False	NA	-30	True	AATAAA	-12	NA	120877531	120870083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120872793_120874180_120876441_120876596
ES.29403.26	chr6	-	1824	5	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	13	-269	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	400.405107360034	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTTGGGAGAGCTGT	NA	False	NA	-30	True	AATAAA	-12	NA	120893784	120870083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120893694
ES.29403.27	chr6	-	3349	6	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8802	-288	intron_retention	FALSE	canonical	3	32	junction_5	375.389610937756	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGGCTCTTCTCT	NA	False	NA	-49	True	NA	NA	NA	120884957	120870102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389
ES.29403.28	chr6	-	1251	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-8	-836	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATCTGTGTGGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	120893805	120870650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
ES.29403.29	chr6	-	5066	1	FSM	ENSMUSG00000107971.2	ENSMUST00000204946.2	2094	1	-1827	-1145	-1827	1145	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAAGCATTGGGGGTGG	NA	False	NA	NA	False	AAAAAG	-18	NA	120893781	120888715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120888700_120893800
ES.29403.3	chr6	-	8039	4	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	14229	-3778	-5056	2854	intron_retention	FALSE	canonical	3	883	junction_1	35.2798337108704	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGAGAGCTTCTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	120879585	120866036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116
ES.29403.4	chr6	-	5874	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-4	2850	intron_retention	FALSE	canonical	3	75	junction_5	358.381137896514	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTGGGGAGAGCTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	120893818	120866040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
ES.29403.5	chr6	-	3025	5	NIC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	-15	13	intron_retention	FALSE	canonical	1	8	junction_4	400.405107360034	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTATCCAGTAACCAGC	NA	False	NA	NA	False	AATGAA	-28	NA	120893779	120868877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120893694
ES.29403.6	chr6	-	2966	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	14	4	intron_retention	FALSE	canonical	1	1	junction_1	384.049475979333	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCCGAAAGCTATCCA	NA	False	NA	NA	False	AATGAA	-19	NA	120893783	120868886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871134_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.7	chr6	-	3094	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	23	-928	6	4	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCCGAAAGCTATCCA	NA	False	NA	NA	False	AATGAA	-19	NA	120893791	120868886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29403.8	chr6	-	2350	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8794	90	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.930964874214	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTTGAATTGTCACTTG	NA	False	NA	NA	False	AATGAA	-12	NA	120884965	120869724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884774
ES.29403.9	chr6	-	1947	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	-1	243	-1	-243	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACCTAGTACATCAGA	NA	False	NA	-4	True	AATAAA	-38	NA	120893815	120870057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ES.29404.1	chr6	+	180	1	Intergenic	novelGene_24394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120901818	120901998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_120901800_120902000
ES.29405.1	chr6	+	4147	1	Antisense	novelGene_ENSMUSG00000051586.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTCTACACAAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	121054960	121059107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_121055000_121059100
ES.29406.1	chr6	-	3591	1	Intergenic	novelGene_24395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATCTTAAAAAAAAAA	9839	False	NA	NA	False	NA	NA	NA	120907001	120903410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_120903400_120907000
ES.29406.10	chr6	-	9081	32	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	22.5366853202445	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	121087126	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.13	chr6	-	9167	33	NNC	ENSMUSG00000051586.18	novel	9267	33	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	26.087723855053	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	121087072	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121084660_121084804_121086976
ES.29406.16	chr6	-	5598	10	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-3010	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.03217841462292	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATGAAAAATGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	120938606	120908682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911962_120912130_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543
ES.29406.17	chr6	-	5739	6	ISM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	2772	-3058	1860	-1	3prime_fragment	FALSE	canonical	3	23	junction_5	2.28035085019828	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAATGAAAAATGTA	983	False	NA	NA	False	AATAAA	-26	NA	120932824	120908683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594
ES.29406.18	chr6	-	4914	17	NNC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	112	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.1086607541143	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAATGAAAAATGTA	NA	False	NA	NA	False	AATAAA	-26	NA	120980001	120908683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120935432_120936972_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120979958
ES.29406.19	chr6	-	6696	31	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-11411	889	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	22.4356858598082	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAATGTCATTTTTTT	8320	False	NA	NA	False	NA	NA	NA	121019132	120910739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956
ES.29406.2	chr6	-	6798	5	NNC	ENSMUSG00000051586.18	novel	992	8	NA	NA	5236	3267	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.4127122105133	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTCTTTATTATTTT	4359	False	NA	NA	False	AATAAA	-15	NA	120929448	120905400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912130_120912235_120928261_120928356_120929335
ES.29406.20	chr6	-	997	5	ISM	ENSMUSG00000051586.18	ENSMUST00000212333.2	3419	14	23972	11745	-111	4270	internal_fragment	FALSE	canonical	0	0	junction_1	13.5899779249269	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCAGAGCTCTTACCTT	NA	False	NA	NA	False	CATAAA	-16	NA	120935707	120923373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120923565_120928261_120928356_120929335_120929447_120934659_120934755_120935201
ES.29406.21	chr6	-	6397	30	NNC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-46	164	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	25.1284926228816	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATGGGACACTCTTAC	NA	False	NA	NA	False	NA	NA	NA	121087100	120927479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120928145_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.22	chr6	-	6539	29	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-71	164	intron_retention	FALSE	canonical	2	4	junction_9	23.794480366639	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATGGGACACTCTTAC	NA	False	NA	NA	False	NA	NA	NA	121087125	120927479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.23	chr6	-	3916	12	NIC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	78	164	intron_retention	FALSE	canonical	3	8	junction_2	11.7550762729052	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATGGGACACTCTTAC	NA	False	NA	NA	False	NA	NA	NA	120980035	120927479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120928356_120929335_120929447_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120979958
ES.29406.25	chr6	-	4441	1	NIC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	9788	-10147	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGGTGTGGTGGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	120949891	120945450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120945400_120949900
ES.29406.26	chr6	-	3518	21	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-72	-14810	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	20.4428471598259	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTTTACATCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	121087126	120950113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.28	chr6	-	3544	22	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-54	-14853	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.169101325598	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGTCTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121087108	120950156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.29	chr6	-	3357	21	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-73	-14972	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	20.4428471598259	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGTCTGCATGCTGCCC	NA	False	NA	NA	False	AATATA	-15	NA	121087127	120950275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.3	chr6	-	9072	32	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8597619731462	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	121087106	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911825_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.30	chr6	-	4648	3	ISM	ENSMUSG00000051586.18	ENSMUST00000150503.4	2810	9	-20	38969	-20	4	5prime_fragment	FALSE	canonical	3	8	junction_2	19	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGAGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	120980133	120974272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120978657_120979747_120979837_120979958
ES.29406.31	chr6	-	7123	19	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-69	4	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	14.3922132581871	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGAGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	121087123	120974272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.33	chr6	-	3802	20	NNC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7320325707644	155	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTCTGAGTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	121087081	120974276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120975294_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.34	chr6	-	5540	19	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-72	-1582	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	14.3922132581871	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAAATGCTTTGTTTCC	NA	False	NA	NA	False	AATATA	-24	NA	121087126	120975858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.35	chr6	-	4566	20	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-27	-2566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	24.9109216333017	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTTGGCTCGTTCCT	NA	False	NA	NA	False	TTTAAA	-22	NA	121087081	120976842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121057513_121057569_121086976
ES.29406.36	chr6	-	3526	19	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-63	-3587	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	14.3922132581871	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGAATTGTCTTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	121087117	120977863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.37	chr6	-	2848	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCTTTAGTGTGATT	NA	False	NA	0	True	AATAAA	-24	NA	121087126	120984195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.38	chr6	-	3011	19	NNC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-60	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	24.7262169057285	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATTTGTCCTTTAGTGT	NA	False	NA	-4	True	AATAAA	-20	NA	121087114	120984199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121084624_121084804_121086976
ES.29406.39	chr6	-	2958	19	NNC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.3552536743155	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTATTTGTCCTTTAGT	NA	False	NA	-6	True	AATAAA	-18	NA	121087108	120984201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_120999981_121000116_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.4	chr6	-	6796	5	ISM	ENSMUSG00000051586.18	ENSMUST00000151602.4	992	8	2879	-3074	1967	0	intron_retention	FALSE	canonical	3	24	junction_1	1.92028643696715	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	1090	False	NA	NA	False	AATAAA	-42	NA	120932717	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335
ES.29406.41	chr6	-	2919	19	NIC	ENSMUSG00000051586.18	novel	2953	19	NA	NA	-67	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	23.4668797338812	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTATTTGTCCTTTA	NA	False	NA	-8	True	AATAAA	-16	NA	121087121	120984203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120984391_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.43	chr6	-	2917	17	NIC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-48	4547	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.480840894602	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTGTGTGGAATGAAC	NA	False	NA	NA	False	AGTAAA	-34	NA	121087102	120989060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120989536_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.44	chr6	-	3157	20	NNC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-72	4531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.3682842284613	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGTGTTTCTTGTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	121087126	120989076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120989536_120991788_120991838_120993721_120993821_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.45	chr6	-	3035	19	NIC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-42	4530	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	27.9368777031806	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGTGTTTCTTGTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	121087096	120989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120989536_120991788_120991846_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.46	chr6	-	2986	18	NIC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-77	4530	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	25.3180461372439	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGTGTTTCTTGTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	121087131	120989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120989536_120991788_120991846_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.47	chr6	-	3108	20	NNC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-20	4528	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	32.7369267218402	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCCTGGTGTTTCTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	121087074	120989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120989536_120991788_120991846_120993721_120993821_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015067_121015443_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.48	chr6	-	4897	19	NIC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-59	4023	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.055995596109	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCTAACATGTACTGT	NA	False	NA	NA	False	AGTAAA	-28	NA	121087113	120989584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120991846_120993721_120993821_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.49	chr6	-	5083	1	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	549	29	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAACAACCTTC	4455	False	NA	NA	False	TTTAAA	-44	NA	120998661	120993578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120993600_120998700
ES.29406.5	chr6	-	6448	15	NNC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	11.5053226369186	141	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	120980032	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120979958
ES.29406.50	chr6	-	8645	16	NIC	ENSMUSG00000051586.18	novel	6930	16	NA	NA	-68	29	intron_retention	FALSE	canonical	0	0	junction_3	21.2953829111696	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAACAACCTTC	NA	False	NA	NA	False	TTTAAA	-44	NA	121087122	120993578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120998318_120999186_120999250_120999344_120999458_120999981_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.51	chr6	-	2042	1	Intergenic	novelGene_24396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGCACAGGCCACAGCA	9098	False	NA	NA	False	NA	NA	NA	121035028	121032986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_121033000_121035000
ES.29406.6	chr6	-	7447	32	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.8566447359885	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	121087087	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120934659_120934755_120935201_120935432_120936972_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29406.7	chr6	-	6504	16	NIC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	79	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	8.89194391945128	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	120980034	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120979958
ES.29406.8	chr6	-	9245	31	NNC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-290	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	24.620700414263	215	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTCTGAAGTCATTGT	NA	False	NA	NA	False	AATAAA	-42	NA	121087344	120908667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950606_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
ES.29407.1	chr6	-	157	1	Antisense	novelGene_ENSMUSG00000108096.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAATAAATAAATAAATAA	8590	False	NA	NA	False	NA	NA	NA	121094936	121094779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_121094800_121094900
ES.29408.1	chr6	+	993	5	Intergenic	novelGene_24397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.02336923485777	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCTCTTAGAGGAAT	NA	False	NA	NA	False	AATAAA	-28	NA	121114399	121123726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121114506_121119702_121119874_121119963_121120075_121123032_121123166_121123254
ES.29408.10	chr6	+	3288	4	NNC	ENSMUSG00000067825.12	novel	3778	4	NA	NA	-9	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.9496751499609	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTATATTGACTGTAT	NA	False	NA	NA	False	NA	NA	NA	121160838	121173080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121161442_121162668_121162713_121167175_121167207_121170470
ES.29408.12	chr6	+	1328	5	NNC	ENSMUSG00000067825.12	novel	3861	5	NA	NA	0	3680	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.7278356643601	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCTTGGTCACGGTGTC	NA	False	NA	NA	False	NA	NA	NA	121160847	121179476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121179338
ES.29408.13	chr6	+	5198	4	NIC	ENSMUSG00000067825.12	novel	4093	5	NA	NA	1	-64	intron_retention	FALSE	canonical	3	35	junction_3	6.12825877028341	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTATATTGACTGTAT	NA	False	NA	NA	False	NA	NA	NA	121160857	121173080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_121161442_121162668_121164526_121167059_121167207_121170470
ES.29408.14	chr6	+	189	1	Antisense	novelGene_ENSMUSG00000107915.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCAAGCAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	121174343	121174532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_121174300_121174500
ES.29408.15	chr6	+	1656	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8505	-757	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGCCTCTTTCTTTGTG	NA	False	NA	3	True	AATATA	-14	NA	121179149	121203056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
ES.29408.16	chr6	+	2907	1	Intergenic	novelGene_24401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	121179287	121182194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121179300_121182200
ES.29408.17	chr6	+	5370	2	Intergenic	novelGene_24402	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTGAGTCTCCAATTT	NA	False	NA	NA	False	NA	NA	NA	121179288	121186179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121179441_121180961
ES.29408.18	chr6	+	2278	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8365	5	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGTACAGTTCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	121179289	121203818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
ES.29408.19	chr6	+	3512	6	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8324	-756	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	28.579713084634	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCCTCTTTCTTTGTGT	NA	False	NA	4	True	AATATA	-15	NA	121179330	121203057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200972_121201019_121201697_121201983
ES.29408.2	chr6	+	3717	6	NNC	ENSMUSG00000067825.12	novel	4093	5	NA	NA	-46211	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.652195330893	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTTCATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	121114414	121173144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121114506_121161085_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
ES.29408.3	chr6	+	993	5	Intergenic	novelGene_24398	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	3.49106001094224	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTATGTAATTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	121114420	121123715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121114506_121118536_121118740_121119963_121120075_121123032_121123166_121123254
ES.29408.4	chr6	+	7820	1	Intergenic	novelGene_24399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTGTCAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	121124380	121132200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121124400_121132200
ES.29408.5	chr6	+	175	1	Intergenic	novelGene_24400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121149363	121149538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121149400_121149500
ES.29408.6	chr6	+	4089	5	FSM	ENSMUSG00000067825.12	ENSMUST00000088561.10	4093	5	4	0	4	0	multi-exon	FALSE	canonical	3	35	junction_4	5.31507290636732	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTGTTTCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	121160629	121173151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
ES.29408.7	chr6	+	3741	6	NIC	ENSMUSG00000067825.12	novel	4093	5	NA	NA	15	-70	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.652195330893	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGATTTTTATATTGA	NA	False	NA	NA	False	NA	NA	NA	121160640	121173074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_121160826_121161085_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170470
ES.29408.8	chr6	+	3473	4	FSM	ENSMUSG00000067825.12	ENSMUST00000118234.8	3778	4	210	95	-12	-95	multi-exon	FALSE	canonical	3	4	junction_2	19.1543438647449	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	121160835	121173049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_121161442_121162668_121162810_121167059_121167207_121170470
ES.29408.9	chr6	+	3862	5	NNC	ENSMUSG00000067825.12	novel	4093	5	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.0836972308827	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATCTGTTTCTACT	NA	False	NA	NA	False	NA	NA	NA	121160838	121173148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121161442_121162668_121162810_121164232_121164526_121167059_121167207_121170470
ES.29409.1	chr6	+	4603	35	NIC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	11.9821450211537	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTCATTAACTGAGTT	NA	False	NA	29	True	AATAAA	-27	NA	121613169	121656188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.10	chr6	+	5689	34	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_4	12.1587298162185	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCCTTCATTAACTGAG	NA	False	NA	27	True	AATAAA	-25	NA	121613199	121656186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.11	chr6	+	5748	33	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	13	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	14.4912419671331	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATCACCATTCCTTCAT	NA	False	NA	19	True	AATAAA	-17	NA	121613199	121656178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121643954_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.12	chr6	+	4496	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.1215987116548	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTCATTAACTGAGTT	NA	False	NA	29	True	AATAAA	-27	NA	121613204	121656188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637042_121637827_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.14	chr6	+	4731	36	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	48	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.8566264947807	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCACCATTCCTTCA	NA	False	NA	18	True	AATAAA	-16	NA	121613234	121656177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121617943_121618148_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.2	chr6	+	4611	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	-11	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	14.1223337808836	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCATTAACTGAGTTG	NA	False	NA	30	True	AATAAA	-28	NA	121613175	121656189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650630_121651676_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.3	chr6	+	4615	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.9821450211537	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGAGTTGTCATTTTT	NA	False	NA	38	True	AATAAA	-36	NA	121613186	121656197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.4	chr6	+	4410	32	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.0209929917345	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCACCATTCCTTCA	NA	False	NA	18	True	AATAAA	-16	NA	121613187	121656177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636346_121639346_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655161_121655520_121656050
ES.29409.5	chr6	+	4585	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.0027493593	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCACCATTCCTTCA	NA	False	NA	18	True	AATAAA	-16	NA	121613189	121656177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646901_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.6	chr6	+	4585	35	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.9821450211537	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCACCATTCCTTCATTA	NA	False	NA	21	True	AATAAA	-19	NA	121613190	121656180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618219_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.7	chr6	+	4922	33	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	6	3	intron_retention	FALSE	non_canonical	0	0	junction_3	12.1490981532581	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCATTAACTGAGTTG	NA	False	NA	30	True	AATAAA	-28	NA	121613192	121656189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.29409.9	chr6	+	4514	34	NNC	ENSMUSG00000030111.10	novel	4605	36	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.0334115281516	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCACCATTCCTTCA	NA	False	NA	18	True	AATAAA	-16	NA	121613192	121656177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121618210_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ES.2941.1	chr10	+	2255	1	Antisense	novelGene_ENSMUSG00000020075.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGGAGACCATGAATT	411	False	NA	NA	False	AATAAA	-39	NA	62433063	62435318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62433100_62435300
ES.2941.10	chr10	+	176	1	Intergenic	novelGene_2275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGTTCAATGTT	NA	False	NA	NA	False	NA	NA	NA	62579432	62579608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62579400_62579600
ES.2941.11	chr10	+	176	1	Intergenic	novelGene_2276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	5664	False	NA	NA	False	NA	NA	NA	62608044	62608220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62608000_62608200
ES.2941.12	chr10	+	2733	1	Antisense	novelGene_ENSMUSG00000020074.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCGCTCCAAGACTC	8524	False	NA	NA	False	NA	NA	NA	62610904	62613637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62610900_62613600
ES.2941.13	chr10	+	132	1	Intergenic	novelGene_2277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAACAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	62628398	62628530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62628400_62628500
ES.2941.2	chr10	+	163	1	Intergenic	novelGene_2264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAATCAACCCCG	2155	False	NA	NA	False	NA	NA	NA	62434807	62434970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62434800_62435000
ES.2941.3	chr10	+	160	2	Antisense	novelGene_ENSMUSG00000112806.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATG	2157	False	NA	NA	False	NA	NA	NA	62434809	62630485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62434839_62630354
ES.2941.4	chr10	+	176	1	Intergenic	novelGene_2265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGATTAAA	3600	False	NA	NA	False	NA	NA	NA	62436252	62436428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62436300_62436400
ES.2941.5	chr10	+	158	1	Intergenic	novelGene_2266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTAAGA	7453	False	NA	NA	False	NA	NA	NA	62440105	62440263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62440100_62440300
ES.2941.6	chr10	+	173	1	Intergenic	novelGene_2267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTAGGGTAAG	NA	False	NA	NA	False	NA	NA	NA	62470872	62471045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62470900_62471000
ES.2941.7	chr10	+	121	1	Intergenic	novelGene_2268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	62494505	62494626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62494500_62494600
ES.2941.8	chr10	+	1951	1	Intergenic	novelGene_2270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGCTTAATCCGAT	NA	False	NA	NA	False	NA	NA	NA	62524379	62526330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62524400_62526300
ES.2941.9	chr10	+	180	1	Intergenic	novelGene_2274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGCCATGG	NA	False	NA	NA	False	NA	NA	NA	62556625	62556805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62556600_62556800
ES.29410.1	chr6	+	175	1	Intergenic	novelGene_24403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTATGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	121835660	121835835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_121835700_121835800
ES.29411.1	chr6	+	175	1	Intergenic	novelGene_24404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACACACTCTACCGAA	NA	False	NA	NA	False	NA	NA	NA	122232236	122232411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122232200_122232400
ES.29412.1	chr6	+	174	1	Intergenic	novelGene_24405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTTTTTAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122255689	122255863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122255700_122255900
ES.29413.1	chr6	+	2568	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	-57	4	-57	-4	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTGGCTTTGTCGTTTG	2607	False	NA	2	True	ATTAAA	-11	NA	122285621	122294635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.10	chr6	+	1186	3	NNC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	-18	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	688.5	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2925	False	NA	-26	True	AATATA	-13	NA	122285939	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289266_122293680
ES.29413.11	chr6	+	2073	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	495.178306830535	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2940	False	NA	-26	True	AATATA	-13	NA	122285954	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289235_122290213_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.12	chr6	+	1959	8	NNC	ENSMUSG00000007458.15	novel	2539	8	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	465.928478351319	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2940	False	NA	-26	True	AATATA	-13	NA	122285954	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286_122294108_122294355
ES.29413.13	chr6	+	5258	5	NIC	ENSMUSG00000007458.15	novel	2539	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1209	junction_3	59.8430238206593	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGTTGCCTCAAGTT	2942	False	NA	11	True	ATTAAA	-18	NA	122285956	122293748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.14	chr6	+	4478	5	NIC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	0	-4	intron_retention	FALSE	canonical	3	1312	junction_4	26.0516314268416	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTGGCTTTGTCGTTTG	2943	False	NA	2	True	ATTAAA	-11	NA	122285957	122294635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122293136_122293286
ES.29413.16	chr6	+	1804	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	492.902768189517	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGGTTGCCTCAAGT	2947	False	NA	10	True	ATTAAA	-17	NA	122285961	122293747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290849_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.17	chr6	+	2337	6	NIC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	4	-32	intron_retention	FALSE	canonical	3	1209	junction_4	56.5225618669218	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2947	False	NA	-26	True	AATATA	-13	NA	122285961	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292394_122293008_122293136_122293286
ES.29413.19	chr6	+	2190	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	5	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	497.121603723766	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2948	False	NA	-26	True	AATATA	-13	NA	122285962	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293295
ES.29413.2	chr6	+	4049	6	FSM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	-182	-891	97	0	multi-exon	FALSE	canonical	3	1209	junction_4	60.7466871524695	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	2761	False	NA	6	True	ATTAAA	-15	NA	122285775	122294639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.20	chr6	+	6892	5	NIC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	10	-32	intron_retention	FALSE	canonical	3	1209	junction_3	60.3298226418742	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2953	False	NA	-26	True	AATATA	-13	NA	122285967	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.21	chr6	+	4803	4	NIC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	14	-32	intron_retention	FALSE	canonical	3	1209	junction_2	69.1680722748742	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2957	False	NA	-26	True	AATATA	-13	NA	122285971	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122286126_122289192_122292394_122293008_122293136_122293286
ES.29413.22	chr6	+	2374	8	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	184	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	594.117112072311	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	3127	False	NA	-26	True	AATATA	-13	NA	122286141	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286456_122288562_122288587_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.23	chr6	+	3950	6	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	242	-5	intron_retention	FALSE	canonical	0	0	junction_1	525.676858916198	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGCTGGCTTTGTCGTTT	3185	False	NA	1	True	ATTAAA	-10	NA	122286199	122294634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286456_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.3	chr6	+	1504	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	121	890	121	1	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTTGCCTCAAGTTG	2785	False	NA	12	True	ATTAAA	-19	NA	122285799	122293749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.4	chr6	+	2566	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	128	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	495.495038656628	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2792	False	NA	-26	True	AATATA	-13	NA	122285806	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290596_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.5	chr6	+	1214	3	ISM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	-55	2720	-55	-2720	5prime_fragment	FALSE	canonical	3	1338	junction_2	19.5	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTCCTAGTGCGATGG	2888	False	NA	14	True	AATAAA	-18	NA	122285902	122291028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122286126_122289192_122289373_122290217
ES.29413.6	chr6	+	2087	8	NNC	ENSMUSG00000007458.15	novel	2539	8	NA	NA	-42	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	465.928478351319	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2901	False	NA	-26	True	AATATA	-13	NA	122285915	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286_122294363_122294521
ES.29413.7	chr6	+	2203	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	-41	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	495.495038656628	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACAATAATTAAAAA	2902	False	NA	-26	True	AATATA	-13	NA	122285916	122294607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122286126_122289192_122289373_122290217_122290364_122292036_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.8	chr6	+	3013	6	FSM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	-36	-1	-36	1	multi-exon	FALSE	canonical	3	1209	junction_4	60.7466871524695	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGTTGCCTCAAGTTG	2907	False	NA	12	True	ATTAAA	-19	NA	122285921	122293749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ES.29413.9	chr6	+	4026	5	NIC	ENSMUSG00000007458.15	novel	2976	6	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	1209	junction_3	62.1972668209786	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGGCTTTGTCGTTTGTG	2919	False	NA	4	True	ATTAAA	-13	NA	122285933	122294637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122286126_122289192_122289373_122290217_122292394_122293008_122293136_122293286
ES.29414.1	chr6	+	3273	1	Antisense	novelGene_ENSMUSG00000040669.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGGAGAGGAGGCTGT	2560	False	NA	NA	False	NA	NA	NA	122296739	122300012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_122296700_122300000
ES.29415.1	chr6	+	174	1	Intergenic	novelGene_24406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	3731	False	NA	NA	False	NA	NA	NA	122312795	122312969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122312800_122313000
ES.29416.1	chr6	+	160	1	Intergenic	novelGene_24407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122328160	122328320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122328200_122328300
ES.29417.1	chr6	-	7542	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	9	3599	intron_retention	FALSE	canonical	0	0	junction_6	296.682722373754	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGTGTCTGTTTATAG	9035	False	NA	NA	False	NA	NA	NA	122316658	122291090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299041_122299279_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.10	chr6	-	4101	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-119	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	345.917613826697	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGCATTCTGCTGTG	8907	False	NA	-9	True	ATTAAA	-44	NA	122316786	122294686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460_122316678_122316744
ES.29417.100	chr6	-	5813	12	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	142	6	intron_retention	FALSE	canonical	3	372	junction_8	209.488712491048	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCCTAATCCAGTTTTT	9264	False	NA	-5	True	AATAAA	-20	NA	122316429	122295255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.102	chr6	-	3581	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	61	junction_14	285.547388754458	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACCCTAATCCAGTTTT	8229	False	NA	-6	True	AATAAA	-19	NA	122317464	122295256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317155
ES.29417.103	chr6	-	4439	15	NNC	ENSMUSG00000040669.15	novel	3289	15	NA	NA	175	5	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_14	359.72393751944	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACCCTAATCCAGTTTT	9297	False	NA	-6	True	AATAAA	-19	NA	122316396	122295256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122315236
ES.29417.105	chr6	-	3481	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-235	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	322.154874732029	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8791	False	NA	-7	True	AATAAA	-18	NA	122316902	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310420_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.107	chr6	-	3107	14	NNC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	379.954450711378	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8518	False	NA	-7	True	AATAAA	-18	NA	122317175	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296303_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317155
ES.29417.108	chr6	-	7414	7	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	5456	4	intron_retention	FALSE	canonical	3	888	junction_6	90.4054140463329	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	NA	False	NA	-7	True	AATAAA	-18	NA	122306648	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122299432_122299966_122300773_122302416
ES.29417.109	chr6	-	4369	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-133	4	intron_retention	FALSE	canonical	3	609	junction_8	158.200536415722	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8893	False	NA	-7	True	AATAAA	-18	NA	122316800	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.11	chr6	-	4140	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161877.8	3530	14	-38	-572	-5	0	multi-exon	FALSE	canonical	3	72	junction_11	292.50572239383	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	9084	False	NA	-12	True	ATTAAA	-41	NA	122316609	122294689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.110	chr6	-	7994	4	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	6188	4	intron_retention	FALSE	canonical	3	888	junction_3	105.594612657191	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	NA	False	NA	-7	True	AATAAA	-18	NA	122305916	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122300773_122302416
ES.29417.111	chr6	-	3535	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-143	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	374.613978186961	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8883	False	NA	-7	True	AATAAA	-18	NA	122316810	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296017_122296184_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.112	chr6	-	4520	12	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-234	4	intron_retention	FALSE	canonical	3	372	junction_7	216.703095051637	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8792	False	NA	-7	True	AATAAA	-18	NA	122316901	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.113	chr6	-	3572	13	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-105	4	intron_retention	FALSE	canonical	3	372	junction_8	207.796307848709	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTACCCTAATCCAGTTT	8921	False	NA	-7	True	AATAAA	-18	NA	122316772	122295257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.114	chr6	-	3493	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160163.8	3289	15	-201	-3	-105	3	multi-exon	FALSE	canonical	3	72	junction_12	285.154952506134	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	8921	False	NA	-8	True	AATAAA	-17	NA	122316772	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.116	chr6	-	3943	12	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-5	3	intron_retention	FALSE	canonical	3	372	junction_7	216.65488418906	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9084	False	NA	-8	True	AATAAA	-17	NA	122316609	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.117	chr6	-	3410	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-65	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	289.893053076858	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	8961	False	NA	-8	True	AATAAA	-17	NA	122316732	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300555_122300590_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.118	chr6	-	3854	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	156	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	298.331037881185	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9278	False	NA	-8	True	AATAAA	-17	NA	122316415	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122315831
ES.29417.119	chr6	-	3886	13	NIC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	-2	3	intron_retention	FALSE	canonical	3	590	junction_9	174.283832201001	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9594	False	NA	-8	True	AATAAA	-17	NA	122313976	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.12	chr6	-	4129	12	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	3	-3	intron_retention	FALSE	canonical	3	372	junction_7	212.456315393102	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCTTACTGCATTCT	9092	False	NA	-15	True	ATTAAA	-38	NA	122316601	122294692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.121	chr6	-	3896	14	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-178	3	intron_retention	FALSE	canonical	3	118	junction_13	281.104541609718	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	8848	False	NA	-8	True	AATAAA	-17	NA	122316845	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.122	chr6	-	3644	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161877.8	3530	14	-111	-3	-15	3	multi-exon	FALSE	canonical	3	72	junction_11	292.50572239383	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9011	False	NA	-8	True	AATAAA	-17	NA	122316682	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.123	chr6	-	3234	14	NIC	ENSMUSG00000040669.15	novel	3289	15	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	72	junction_11	308.633100189439	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9024	False	NA	-8	True	AATAAA	-17	NA	122316669	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.124	chr6	-	3319	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	291.879098537845	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTACCCTAATCCAGTT	9116	False	NA	-8	True	AATAAA	-17	NA	122316577	122295258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313788_122313975_122316556
ES.29417.125	chr6	-	3491	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	351.731311593886	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTACCCTAATCCAGT	9094	False	NA	-9	True	AATAAA	-16	NA	122316599	122295259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296017_122296197_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.126	chr6	-	3389	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-37594	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	412.123573700899	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTACCCTAATCCAGT	NA	False	NA	-9	True	AATAAA	-16	NA	122355114	122295259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460_122316602_122329546_122329657_122355089
ES.29417.127	chr6	-	4238	13	NNC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	3	2	intron_retention	FALSE	canonical	3	72	junction_10	362.558299909592	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTACCCTAATCCAGT	9125	False	NA	-9	True	AATAAA	-16	NA	122316568	122295259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316460
ES.29417.129	chr6	-	4307	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	141	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	321.743659220381	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	9263	False	NA	-10	True	AATAAA	-15	NA	122316430	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122315235
ES.29417.13	chr6	-	4276	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-235	2	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	8791	False	NA	-17	True	ATTAAA	-36	NA	122316902	122294694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.130	chr6	-	3557	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-245	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	289.893053076858	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8781	False	NA	-10	True	AATAAA	-15	NA	122316912	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316678_122316744
ES.29417.131	chr6	-	3107	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	311.823316338347	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	9095	False	NA	-10	True	AATAAA	-15	NA	122316598	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302664_122302710_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.132	chr6	-	5179	6	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	2083	1	intron_retention	FALSE	canonical	3	609	junction_5	187.318552204527	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	NA	False	NA	-10	True	AATAAA	-15	NA	122310021	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122297011_122297173_122299432_122299966_122300773_122302416_122302910_122309480
ES.29417.133	chr6	-	3449	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-230	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	319.964384112657	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8796	False	NA	-10	True	AATAAA	-15	NA	122316897	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296499_122296854_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.134	chr6	-	5207	12	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-155	1	intron_retention	FALSE	canonical	3	609	junction_7	164.225354139209	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8871	False	NA	-10	True	AATAAA	-15	NA	122316822	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.135	chr6	-	3497	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-138	1	combination_of_known_junctions	FALSE	canonical	2	34	junction_14	291.170403855943	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8888	False	NA	-10	True	AATAAA	-15	NA	122316805	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316576
ES.29417.136	chr6	-	3401	14	NIC	ENSMUSG00000040669.15	novel	3289	15	NA	NA	-96	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	309.776307917093	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8930	False	NA	-10	True	AATAAA	-15	NA	122316763	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311924_122312043_122313816_122313975_122316556
ES.29417.137	chr6	-	3238	14	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-3	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	309.776307917093	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	9086	False	NA	-10	True	AATAAA	-15	NA	122316607	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311931_122312043_122313816_122313975_122316556
ES.29417.138	chr6	-	3382	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-226	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	311.823316338347	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8800	False	NA	-10	True	AATAAA	-15	NA	122316893	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316678_122316744
ES.29417.139	chr6	-	3459	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-136	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	289.893053076858	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8890	False	NA	-10	True	AATAAA	-15	NA	122316803	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316677_122316732
ES.29417.14	chr6	-	4058	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-121	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	298.672889459287	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	8905	False	NA	-17	True	ATTAAA	-36	NA	122316788	122294694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299420_122299962_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.140	chr6	-	3473	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-5295	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	363.023758022652	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	2878	False	NA	-10	True	AATAAA	-15	NA	122322815	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122322180_122322286_122322715
ES.29417.141	chr6	-	3393	14	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-172	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	301.778711198362	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACCTACCCTAATCCAG	8854	False	NA	-10	True	AATAAA	-15	NA	122316839	122295260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122316556
ES.29417.143	chr6	-	5730	10	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	18	0	intron_retention	FALSE	canonical	3	609	junction_5	176.723331234077	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACACCTACCCTAATCC	9044	False	NA	-12	True	AATAAA	-13	NA	122316649	122295262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297283_122297896_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.144	chr6	-	2266	9	NNC	ENSMUSG00000040669.15	novel	3127	14	NA	NA	9597	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	354.587083803119	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACACCTACCCTAATCC	NA	False	NA	-12	True	AATAAA	-13	NA	122302507	122295262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300831_122302416
ES.29417.145	chr6	-	6218	13	NIC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	-18	0	intron_retention	FALSE	canonical	3	590	junction_9	181.381791166221	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACACCTACCCTAATCC	9008	False	NA	-12	True	AATAAA	-13	NA	122316685	122295262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.147	chr6	-	3708	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	590	junction_8	183.124729806399	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9098	False	NA	-13	True	AATAAA	-12	NA	122316595	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.148	chr6	-	4708	12	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	72	junction_9	304.277222445541	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9090	False	NA	-13	True	AATAAA	-12	NA	122316603	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.149	chr6	-	2262	11	NNC	ENSMUSG00000040669.15	novel	3744	14	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	320.606674914918	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9084	False	NA	-13	True	AATAAA	-12	NA	122316609	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302453_122313917_122313975_122316556
ES.29417.15	chr6	-	4261	14	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-75	2	intron_retention	FALSE	canonical	3	590	junction_9	181.15892529218	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	8951	False	NA	-17	True	ATTAAA	-36	NA	122316742	122294694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.150	chr6	-	3556	14	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_8	298.940575124257	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9085	False	NA	-13	True	AATAAA	-12	NA	122316608	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302904_122309476_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.151	chr6	-	3105	13	NNC	ENSMUSG00000040669.15	novel	3683	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_6	327.679075299124	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9594	False	NA	-13	True	AATAAA	-12	NA	122313976	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299037_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.154	chr6	-	3404	14	NNC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	169	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_13	319.833370077896	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACCTACCCTAATC	9291	False	NA	-13	True	AATAAA	-12	NA	122316402	122295263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316107
ES.29417.155	chr6	-	4768	12	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	72	junction_9	303.403231131702	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCACACCTACCCTAAT	9085	False	NA	-14	True	AATAAA	-11	NA	122316608	122295264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.156	chr6	-	2229	6	ISM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-209	6629	-146	1076	5prime_fragment	FALSE	canonical	3	372	junction_1	255.358258139423	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGAGTCAGCCATTCT	8880	False	NA	NA	False	AATAAA	-27	NA	122316813	122301437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.157	chr6	-	177	1	Intergenic	novelGene_24408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCCATCT	NA	False	NA	NA	False	NA	NA	NA	122346909	122346732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122346700_122346900
ES.29417.16	chr6	-	4048	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160163.8	3289	15	-192	-567	-96	2	multi-exon	FALSE	canonical	3	72	junction_12	285.154952506134	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTGTCTTACTGCATT	8930	False	NA	-17	True	ATTAAA	-36	NA	122316763	122294694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.17	chr6	-	3988	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-104	1	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_13	297.259673702081	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTGTCTTACTGCAT	8922	False	NA	-18	True	ATTAAA	-35	NA	122316771	122294695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.18	chr6	-	4024	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-4851	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	298.331037881185	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCATTGTCTTACTGCAT	3322	False	NA	-18	True	ATTAAA	-35	NA	122322371	122294695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122322180
ES.29417.19	chr6	-	4893	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-96	0	intron_retention	FALSE	canonical	3	609	junction_8	158.200536415722	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8930	False	NA	-19	True	ATTAAA	-34	NA	122316763	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.20	chr6	-	5596	11	NNC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	-123	0	intron_retention	FALSE	canonical	0	0	junction_5	420.472936108854	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8903	False	NA	-19	True	ATTAAA	-34	NA	122316790	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122299432_122299966_122300773_122302411_122302910_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.21	chr6	-	3611	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	311.823316338347	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	9033	False	NA	-19	True	ATTAAA	-34	NA	122316660	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300499_122300667_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.22	chr6	-	3994	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_10	284.552961248169	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8909	False	NA	-19	True	ATTAAA	-34	NA	122316784	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309571_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.23	chr6	-	4160	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-484	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	298.331037881185	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8831	False	NA	-19	True	ATTAAA	-34	NA	122314739	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122314411
ES.29417.24	chr6	-	4057	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	354.695414031101	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8895	False	NA	-19	True	ATTAAA	-34	NA	122316798	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.25	chr6	-	3764	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-135	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	327.308043829594	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	8891	False	NA	-19	True	ATTAAA	-34	NA	122316802	122294696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122316556
ES.29417.26	chr6	-	6299	14	FSM	ENSMUSG00000040669.15	ENSMUST00000079560.10	3839	14	-2468	8	129	-1	multi-exon	FALSE	canonical	3	590	junction_10	176.028608487135	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCATTGTCTTACTGC	9251	False	NA	-20	True	ATTAAA	-33	NA	122316442	122294697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.27	chr6	-	4736	12	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-96	-2	intron_retention	FALSE	canonical	3	372	junction_7	207.616541005705	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCATTGTCTTACTG	8930	False	NA	-21	True	ATTAAA	-32	NA	122316763	122294698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.29	chr6	-	3993	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-103	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	292.089071192683	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCATTGTCTTACTG	8923	False	NA	-21	True	ATTAAA	-32	NA	122316770	122294698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122311992_122313816_122313975_122316556
ES.29417.3	chr6	-	7394	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	0	3597	intron_retention	FALSE	canonical	2	4	junction_5	322.69809291596	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATGGTGTCTGTTTAT	9026	False	NA	NA	False	NA	NA	NA	122316667	122291092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298015_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.30	chr6	-	3137	6	NIC	ENSMUSG00000040669.15	novel	3683	13	NA	NA	11936	-2	intron_retention	FALSE	canonical	3	981	junction_5	61.0540743931148	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCATTGTCTTACTG	NA	False	NA	-21	True	ATTAAA	-32	NA	122300168	122294698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122299432_122299966
ES.29417.31	chr6	-	3904	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	291.011930816506	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCATTGTCTTACTG	9085	False	NA	-21	True	ATTAAA	-32	NA	122316608	122294698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297301_122297892_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.32	chr6	-	4046	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	248	-3	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_6	316.401250754939	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTCCATTGTCTTACT	8758	False	NA	-22	True	ATTAAA	-31	NA	122316935	122294699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299037_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.33	chr6	-	3748	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	5	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	365.783838252226	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTCCATTGTCTTACT	9094	False	NA	-22	True	ATTAAA	-31	NA	122316599	122294699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300684_122302479_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313788_122313975_122316556
ES.29417.35	chr6	-	3995	13	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-21	-4	intron_retention	FALSE	canonical	3	372	junction_8	207.796307848709	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTCCATTGTCTTAC	9055	False	NA	-23	True	ATTAAA	-30	NA	122316638	122294700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.36	chr6	-	3979	14	NIC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	308.929416882537	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTCCATTGTCTTAC	8231	False	NA	-23	True	ATTAAA	-30	NA	122317462	122294700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317155
ES.29417.37	chr6	-	3840	14	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-77	-4	combination_of_known_junctions	FALSE	canonical	2	34	junction_13	314.562079366137	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTCCATTGTCTTAC	8949	False	NA	-23	True	ATTAAA	-30	NA	122316744	122294700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316576
ES.29417.38	chr6	-	3813	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-116	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	311.823316338347	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGCCTCCATTGTCTT	8910	False	NA	-25	True	ATTAAA	-28	NA	122316783	122294702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316656_122316739
ES.29417.39	chr6	-	3795	2	NIC	ENSMUSG00000040669.15	novel	3683	13	NA	NA	13254	5	intron_retention	FALSE	canonical	3	1048	junction_1	0	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGCCTCCATTGTCT	NA	False	NA	-26	True	ATTAAA	-27	NA	122298850	122294703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122296508_122296859
ES.29417.4	chr6	-	3883	14	FSM	ENSMUSG00000040669.15	ENSMUST00000079560.10	3839	14	86	-130	-10	130	multi-exon	FALSE	canonical	3	590	junction_10	176.028608487135	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAAAGAAGCCTTTT	9682	False	NA	NA	False	AAAACA	-14	NA	122313888	122294559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.40	chr6	-	4008	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-96	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	283.233876101409	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGCCTCCATTGTCT	8930	False	NA	-26	True	ATTAAA	-27	NA	122316763	122294703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.42	chr6	-	4064	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	201	5	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_14	364.06369284643	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGCCTCCATTGTCT	9323	False	NA	-26	True	ATTAAA	-27	NA	122316370	122294703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316107
ES.29417.45	chr6	-	4095	14	NNC	ENSMUSG00000040669.15	novel	3289	15	NA	NA	-214	3	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_11	370.303857319313	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTTGGCCTCCATTGT	8812	False	NA	-28	True	ATTAAA	-25	NA	122316881	122294705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316460
ES.29417.47	chr6	-	8959	8	ISM	ENSMUSG00000040669.15	ENSMUST00000161877.8	3530	14	8108	-553	3641	0	3prime_fragment	FALSE	canonical	3	888	junction_7	97.9079117521841	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	NA	False	NA	-31	True	ATTAAA	-22	NA	122308463	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416
ES.29417.48	chr6	-	3097	10	NNC	ENSMUSG00000040669.15	novel	3744	14	NA	NA	9428	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	426.266942388029	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	NA	False	NA	-31	True	ATTAAA	-22	NA	122302676	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296017_122296184_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416
ES.29417.5	chr6	-	4586	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-842	-132	19	13	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTGTCTCCTTAGC	8247	False	NA	1	True	AGTAAA	-34	NA	122317446	122294676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.50	chr6	-	3937	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-229	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	311.823316338347	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	8797	False	NA	-31	True	ATTAAA	-22	NA	122316896	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316678_122316744
ES.29417.51	chr6	-	6040	15	NNC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	9	0	intron_retention	FALSE	canonical	2	31	junction_14	291.798723263073	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	8237	False	NA	-31	True	ATTAAA	-22	NA	122317456	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122315236
ES.29417.52	chr6	-	3867	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	290.797329311488	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9084	False	NA	-31	True	ATTAAA	-22	NA	122316609	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302904_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.53	chr6	-	4251	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	351.731311593886	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	8885	False	NA	-31	True	ATTAAA	-22	NA	122316808	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296017_122296197_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.56	chr6	-	4566	14	NNC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	118	junction_13	270.478930918854	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9100	False	NA	-31	True	ATTAAA	-22	NA	122316593	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.57	chr6	-	3987	14	NNC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_13	319.833370077896	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9263	False	NA	-31	True	ATTAAA	-22	NA	122316430	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316107
ES.29417.58	chr6	-	5441	12	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-121	0	intron_retention	FALSE	canonical	3	609	junction_7	165.101621598776	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	8905	False	NA	-31	True	ATTAAA	-22	NA	122316788	122294708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.63	chr6	-	2871	10	NNC	ENSMUSG00000040669.15	novel	3683	13	NA	NA	9397	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	334.432114944383	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGAAAGTTGGCCT	NA	False	NA	-35	True	ATTAAA	-18	NA	122302707	122294712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302561_122302647
ES.29417.66	chr6	-	3915	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	-172	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	320.34496938189	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGAAAGTTGGCCT	8854	False	NA	-35	True	ATTAAA	-18	NA	122316839	122294712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299311_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.68	chr6	-	4916	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-213	-4	intron_retention	FALSE	canonical	3	590	junction_8	187.967786838301	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGAAAGTTGGCCT	8813	False	NA	-35	True	ATTAAA	-18	NA	122316880	122294712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.69	chr6	-	4013	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-92	-4	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_6	292.740359990465	1356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGAAAGTTGGCCT	8934	False	NA	-35	True	ATTAAA	-18	NA	122316759	122294712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299037_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.7	chr6	-	4784	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-879	-12	24	5	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCATTCTGCTGTGTC	8197	False	NA	-7	True	AGTAAA	-26	NA	122317496	122294684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.70	chr6	-	4040	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-180	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	289.893053076858	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGAAAGTTGGCCT	8846	False	NA	-35	True	ATTAAA	-18	NA	122316847	122294712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556_122316678_122316744
ES.29417.71	chr6	-	8693	11	NIC	ENSMUSG00000040669.15	novel	4213	15	NA	NA	2	-5	intron_retention	FALSE	canonical	3	609	junction_7	160.224717194321	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGATGAAAGTTGGCC	8230	False	NA	-36	True	ATTAAA	-17	NA	122317463	122294713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.74	chr6	-	5815	11	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	118	junction_10	299.570041893378	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGATGAAAGTTGGC	9069	False	NA	-37	True	ATTAAA	-16	NA	122316624	122294714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.77	chr6	-	5753	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	5	-6	intron_retention	FALSE	canonical	3	590	junction_8	188.103454838613	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGATGAAAGTTGGC	9083	False	NA	-37	True	ATTAAA	-16	NA	122316610	122294714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.78	chr6	-	4094	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	287.639584571117	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGATGAAAGTTGGC	9026	False	NA	-37	True	ATTAAA	-16	NA	122316667	122294714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309806_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.8	chr6	-	4154	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	61	junction_14	285.547388754458	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCATTCTGCTGTGTC	8228	False	NA	-7	True	AGTAAA	-26	NA	122317465	122294684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317155
ES.29417.81	chr6	-	3630	14	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	0	11	intron_retention	FALSE	canonical	3	590	junction_9	181.15892529218	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATCCAGTTTTTAAACA	9026	False	NA	0	True	AATAAA	-25	NA	122316667	122295250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.82	chr6	-	3462	14	NIC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	24	10	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	308.929416882537	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCCAGTTTTTAAAC	8197	False	NA	-1	True	AATAAA	-24	NA	122317496	122295251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317155
ES.29417.83	chr6	-	4688	12	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-7	10	intron_retention	FALSE	canonical	3	609	junction_7	165.101621598776	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCCAGTTTTTAAAC	9115	False	NA	-1	True	AATAAA	-24	NA	122316578	122295251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.84	chr6	-	4183	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	-845	555	3	10	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCCAGTTTTTAAAC	8231	False	NA	-1	True	AATAAA	-24	NA	122317462	122295251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.85	chr6	-	3509	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	-341	444	238	9	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAATCCAGTTTTTAAA	8748	False	NA	-2	True	AATAAA	-23	NA	122316945	122295252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.87	chr6	-	3502	15	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-139	9	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	283.233876101409	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAATCCAGTTTTTAAA	8887	False	NA	-2	True	AATAAA	-23	NA	122316806	122295252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.88	chr6	-	4365	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	1	9	intron_retention	FALSE	canonical	3	590	junction_8	188.348284804744	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAATCCAGTTTTTAAA	9108	False	NA	-2	True	AATAAA	-23	NA	122316585	122295252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.89	chr6	-	6628	9	NIC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	178	9	intron_retention	FALSE	canonical	3	372	junction_5	229.718713865458	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAATCCAGTTTTTAAA	9859	False	NA	-2	True	AATAAA	-23	NA	122315645	122295252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ES.29417.9	chr6	-	3925	14	NIC	ENSMUSG00000040669.15	novel	3289	15	NA	NA	-121	3	combination_of_known_junctions	FALSE	canonical	3	72	junction_11	308.633100189439	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGCATTCTGCTGTG	8905	False	NA	-9	True	ATTAAA	-44	NA	122316788	122294686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.90	chr6	-	3594	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-209	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	290.797329311488	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAATCCAGTTTTTAAA	8817	False	NA	-2	True	AATAAA	-23	NA	122316876	122295252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302904_122309476_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.91	chr6	-	3481	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-105	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	367.598549884995	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	8921	False	NA	-3	True	AATAAA	-22	NA	122316772	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296506_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311036_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.92	chr6	-	5757	11	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	-100	8	intron_retention	FALSE	canonical	3	72	junction_8	346.505252485442	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	8926	False	NA	-3	True	AATAAA	-22	NA	122316767	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122302910_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ES.29417.93	chr6	-	3387	16	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-73	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	289.893053076858	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	8953	False	NA	-3	True	AATAAA	-22	NA	122316740	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300213_122300284_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.94	chr6	-	3310	14	NNC	ENSMUSG00000040669.15	novel	3839	14	NA	NA	-4851	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	321.743659220381	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	3322	False	NA	-3	True	AATAAA	-22	NA	122322371	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122322180
ES.29417.95	chr6	-	3711	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-229	8	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_14	273.877300100253	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	8797	False	NA	-3	True	AATAAA	-22	NA	122316896	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316460
ES.29417.96	chr6	-	5576	2	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	9631	8	intron_retention	FALSE	canonical	3	888	junction_1	0	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTAATCCAGTTTTTAA	NA	False	NA	-3	True	AATAAA	-22	NA	122302473	122295253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122300773_122302416
ES.29417.97	chr6	-	3562	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	4	7	intron_retention	FALSE	canonical	1	1	junction_1	358.68922367932	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCTAATCCAGTTTTTA	9111	False	NA	-4	True	AATAAA	-21	NA	122316582	122295254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296175_122296197_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.98	chr6	-	3511	15	NNC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	-104	6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	374.005729520666	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCCTAATCCAGTTTTT	8922	False	NA	-5	True	AATAAA	-20	NA	122316771	122295255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296017_122296197_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29417.99	chr6	-	2924	14	NNC	ENSMUSG00000040669.15	novel	3612	14	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	323.586301741214	1355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCCTAATCCAGTTTTT	9094	False	NA	-5	True	AATAAA	-20	NA	122316599	122295255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300639_122302518_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ES.29418.1	chr6	-	1998	3	NNC	ENSMUSG00000118448.2	novel	2827	22	NA	NA	15768	-17053	intron_retention	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCCTGTTGCAGCGTC	NA	False	NA	NA	False	NA	NA	NA	122370266	122366917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122368719_122369012_122369141_122370197
ES.29419.1	chr6	+	170	1	Intergenic	novelGene_24409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAATGTCTAGTT	NA	False	NA	NA	False	NA	NA	NA	122395529	122395699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122395500_122395700
ES.2942.1	chr10	+	240	2	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGCTCTTGTTCCCCA	NA	False	NA	NA	False	NA	NA	NA	62634748	62668268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62634951_62668230
ES.2942.2	chr10	+	706	1	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAATACCCACTACACCA	NA	False	NA	NA	False	NA	NA	NA	62647553	62648259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62647600_62648300
ES.2942.3	chr10	+	4006	2	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGCTGGAGGCTGC	4917	False	NA	NA	False	NA	NA	NA	62656636	62670772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62658536_62668665
ES.2942.4	chr10	+	4964	1	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATCGGGATCAGAGGTC	6398	False	NA	NA	False	NA	NA	NA	62658117	62663081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62658100_62663100
ES.2942.5	chr10	+	6545	1	Intergenic	novelGene_2283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTTGTTCCCCAAATAG	NA	False	NA	NA	False	NA	NA	NA	62661728	62668273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62661700_62668300
ES.29420.1	chr6	+	153	1	Intergenic	novelGene_24410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	122397385	122397538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122397400_122397500
ES.29421.1	chr6	+	1103	1	Antisense	novelGene_ENSMUSG00000040649.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	CATAAA	-26	NA	122431741	122432844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_122431700_122432800
ES.29422.1	chr6	+	543	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-39	-33	-39	33	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGCT	NA	False	NA	-11	True	AATAAA	-15	NA	122433823	122434366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122433800_122434400
ES.29422.2	chr6	+	368	2	Genic_Genomic	ENSMUSG00000055093.11	novel	471	1	NA	NA	82	29	multi-exon	FALSE	canonical	3	216	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGTAAAAAAAAAAAAAAGA	NA	False	NA	-15	True	AATAAA	-11	NA	122433944	122434362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_122434002_122434051
ES.29423.1	chr6	+	2926	1	Intergenic	novelGene_24411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	122455774	122458700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122455800_122458700
ES.29424.1	chr6	+	1574	1	Intergenic	novelGene_24412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCTGAGTTTTTCCTGG	6795	False	NA	NA	False	NA	NA	NA	122463659	122465233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122463700_122465200
ES.29425.1	chr6	-	179	2	Antisense	novelGene_ENSMUSG00000055093.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	241	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAATCATATCT	2936	False	NA	NA	False	NA	NA	NA	122452947	122419816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_122419915_122452866
ES.29425.10	chr6	-	1606	9	NIC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	173	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	65.4645657970784	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGAGTGTGATTTGTT	9479	False	NA	NA	False	AATAAA	-16	NA	122463225	122424256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122424419_122426786_122426952_122429512_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.11	chr6	-	7798	7	NIC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	36	-1	intron_retention	FALSE	canonical	1	1	junction_6	64.4351525868364	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGAGTGTGATTTGT	9342	False	NA	NA	False	AATAAA	-15	NA	122463362	122424257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463308
ES.29425.12	chr6	-	7793	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_6	64.7415803191598	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGGAGTGTGATTTG	9315	False	NA	NA	False	AATAAA	-14	NA	122463389	122424258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463339
ES.29425.13	chr6	-	3611	9	NNC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	-2492	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	71.6985878522025	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGGAGTGTGATTTG	3878	False	NA	NA	False	AATAAA	-14	NA	122452005	122424258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122426952_122429512_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122449822
ES.29425.14	chr6	-	7798	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-533	-2	intron_retention	FALSE	canonical	1	1	junction_6	64.4351525868364	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGGAGTGTGATTTG	8707	False	NA	NA	False	AATAAA	-14	NA	122463997	122424258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463942
ES.29425.16	chr6	-	4817	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-2	382	intron_retention	FALSE	canonical	1	1	junction_6	65.5159013777063	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAGAAAATACTTTCCT	9238	False	NA	NA	False	AATATA	-24	NA	122463466	122429677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049_122463123_122463414
ES.29425.19	chr6	-	5027	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-45	-257	-45	257	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTAATGTTTACGTTT	9195	False	NA	NA	False	NA	NA	NA	122463509	122429802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.20	chr6	-	4396	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	66.3186248349587	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTCACTGCTTTCTTT	9195	False	NA	NA	False	AATATA	-16	NA	122463509	122430064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463418
ES.29425.21	chr6	-	4011	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	430	-508	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTTTTGATACTTTG	9736	False	NA	NA	False	NA	NA	NA	122462968	122430567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.22	chr6	-	3067	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	430	-293	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGTCTGATCATGCT	9736	False	NA	NA	False	AATAAA	-21	NA	122462968	122431511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.23	chr6	-	3318	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-46	1453	-46	-294	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGAGGTCTGATCATGC	9194	False	NA	NA	False	AATAAA	-20	NA	122463510	122431512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.24	chr6	-	2546	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	263	1916	197	-757	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTATGTATGTTTG	9503	False	NA	NA	False	AGTAAA	-20	NA	122463201	122431975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.25	chr6	-	2389	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	202	2134	136	-975	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCTGTGTTTGCATT	9442	False	NA	NA	False	TATAAA	-23	NA	122463262	122432193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.26	chr6	-	2286	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	376	-1128	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGACTGCATCTTTA	9682	False	NA	-1	True	AATACA	-17	NA	122463022	122432346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.27	chr6	-	2482	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-44	2287	-44	-1128	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGACTGCATCTTTA	9196	False	NA	-1	True	AATACA	-17	NA	122463508	122432346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.28	chr6	-	2136	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	15	-1129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.705322126499	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTATGACTGCATCTTT	9255	False	NA	-2	True	AATACA	-16	NA	122463449	122432347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463335
ES.29425.29	chr6	-	2287	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	142	-1131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.9948828686657	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTCTATGACTGCATCT	9448	False	NA	-4	True	AATACA	-14	NA	122463256	122432349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122449822_122449883_122463049
ES.29425.3	chr6	-	6770	1	NIC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	-1333	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGTGATTTGTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	122431024	122424254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122424300_122431000
ES.29425.30	chr6	-	1969	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	51	-1231	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	66.3186248349587	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGCATTGACTT	9357	False	NA	-29	True	GATAAA	-13	NA	122463347	122432449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463298
ES.29425.31	chr6	-	2162	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	397	-1231	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGCATTGACTT	9703	False	NA	-29	True	GATAAA	-13	NA	122463001	122432449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.32	chr6	-	2076	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-31	-1231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.705322126499	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTGCATTGACTT	9209	False	NA	-29	True	GATAAA	-13	NA	122463495	122432449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463339
ES.29425.33	chr6	-	2348	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	-14	2391	-14	-1232	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTTGTGCATTGACT	9226	False	NA	-30	True	GATAAA	-12	NA	122463478	122432450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.34	chr6	-	1874	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-3	-1330	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	64.001874972535	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGCATGTTTGCATG	9237	False	NA	-128	True	AATAAA	-14	NA	122463467	122432548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463414
ES.29425.36	chr6	-	1803	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-22	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.705322126499	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGCATGTTTGCATG	9218	False	NA	-128	True	AATAAA	-14	NA	122463486	122432548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449633_122463414
ES.29425.37	chr6	-	2067	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	391	-1332	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	61.6914904990956	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTGGCATGTTTGCA	9697	False	NA	-130	True	AATAAA	-12	NA	122463007	122432550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.38	chr6	-	1815	7	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-44	-1503	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	65.5159013777063	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTGAAATGTCTGC	9196	False	NA	NA	False	AATACA	-11	NA	122463508	122432721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049_122463123_122463414
ES.29425.39	chr6	-	1520	5	NNC	ENSMUSG00000040649.16	novel	3039	5	NA	NA	-2731	-1503	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	70.111964028973	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTGAAATGTCTGC	9606	False	NA	NA	False	AATACA	-11	NA	122446277	122432721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122446180
ES.29425.4	chr6	-	7865	8	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	5	0	intron_retention	FALSE	canonical	1	1	junction_7	62.9385836043555	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGTGATTTGTTCT	9245	False	NA	NA	False	AATAAA	-18	NA	122463459	122424254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049_122463123_122463414
ES.29425.41	chr6	-	1730	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	-32	-1503	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	64.001874972535	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATCTGAAATGTCTGC	9208	False	NA	NA	False	AATACA	-11	NA	122463496	122432721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463414
ES.29425.5	chr6	-	5027	9	NNC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	67.207584207439	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTGTGATTTGTTCT	9365	False	NA	NA	False	AATAAA	-18	NA	122463339	122424254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122426952_122429512_122429723_122430171_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ES.29425.6	chr6	-	5008	7	NIC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	-32	1	intron_retention	FALSE	canonical	2	12	junction_2	61.1130555246222	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGAGTGTGATTTGTTC	6338	False	NA	NA	False	AATAAA	-17	NA	122449545	122424255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122424419_122426786_122426952_122429512_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
ES.29425.7	chr6	-	7676	6	NNC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	-2790	0	intron_retention	FALSE	canonical	3	8	junction_5	66.4903000444426	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGAGTGTGATTTGTT	9547	False	NA	NA	False	AATAAA	-16	NA	122446336	122424256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122446180
ES.29425.8	chr6	-	1636	9	NNC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	433	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	70.8184298046773	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGAGTGTGATTTGTT	9739	False	NA	NA	False	AATAAA	-16	NA	122462965	122424256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122424419_122426786_122426952_122429512_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122462759
ES.29425.9	chr6	-	10504	6	NIC	ENSMUSG00000040649.16	novel	1372	8	NA	NA	-2968	0	intron_retention	FALSE	canonical	3	70	junction_1	40.2690948495245	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGAGTGTGATTTGTT	3402	False	NA	NA	False	AATAAA	-16	NA	122452481	122424256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122424419_122426786_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
ES.29426.1	chr6	-	196	1	Intergenic	novelGene_24413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTCATGGTCTCTCA	9135	False	NA	NA	False	NA	NA	NA	122485076	122484880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122484900_122485100
ES.29427.1	chr6	+	593	5	ISM	ENSMUSG00000030116.15	ENSMUST00000142896.8	425	9	8160	-294	-663	0	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	7068	False	NA	4	True	AATACA	-15	NA	122498794	122505591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ES.29427.2	chr6	+	1200	5	ISM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	8299	5	-617	-5	3prime_fragment	FALSE	canonical	3	18	junction_1	53.3479146733966	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGCTCACGGGCA	7114	False	NA	NA	False	TTTAAA	-5	NA	122498840	122506244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ES.29427.3	chr6	+	3594	3	ISM	ENSMUSG00000030116.15	ENSMUST00000118626.8	748	9	9176	-2	336	-1	3prime_fragment	FALSE	canonical	3	140	junction_2	7	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTTTGCTGATTTCTGG	8067	False	NA	6	True	AATACA	-17	NA	122499793	122505593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122502998_122503745_122503820_122505277
ES.29427.4	chr6	+	2652	4	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	342	4	intron_retention	FALSE	canonical	3	67	junction_1	38.1430057663117	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACGGGCATGTTTTATT	8073	False	NA	NA	False	AAAAAG	-4	NA	122499799	122506253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122499850_122501445_122502998_122503745_122503820_122505277
ES.29427.5	chr6	+	1190	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	348	-12	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGCAAAAAGAAAGCTC	8079	False	NA	NA	False	NA	NA	NA	122499805	122506237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ES.29427.6	chr6	+	539	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	355	-1	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTTTGCTGATTTCTGG	8086	False	NA	6	True	AATACA	-17	NA	122499812	122505593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ES.29427.7	chr6	+	853	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	380	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	60.1165534607565	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	8111	False	NA	4	True	AATACA	-15	NA	122499837	122505591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122500191_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ES.29428.1	chr6	+	795	1	Antisense	novelGene_ENSMUSG00000030117.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAACAAACAAAATGAAA	6719	False	NA	NA	False	NA	NA	NA	122585134	122585929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_122585100_122585900
ES.29429.1	chr6	+	946	6	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	-16658	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	907.624019073978	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTTTGTAATTTACACA	8295	False	NA	28	True	AATAAA	-18	NA	122586710	122607235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122586787_122590663_122590744_122603415_122603570_122605535_122605769_122606259_122606296_122606868
ES.29429.10	chr6	+	781	4	FSM	ENSMUSG00000046323.9	ENSMUST00000123429.2	691	4	-91	1	-91	-1	multi-exon	FALSE	canonical	2	12	junction_1	513.829413975754	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGACTCTTTGTAATTT	932	False	NA	23	True	AATAAA	-13	NA	122603620	122607230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122603771_122605535_122605769_122606259_122606296_122606868
ES.29429.11	chr6	+	2425	6	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	-33837	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2164.51143679122	2379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	6342	False	NA	17	True	AATAAA	-18	NA	122650610	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122650937_122662343_122662477_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.12	chr6	+	143	1	Intergenic	novelGene_24421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	9705	False	NA	NA	False	NA	NA	NA	122653973	122654116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122654000_122654100
ES.29429.13	chr6	+	174	1	Intergenic	novelGene_24423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	5696	False	NA	NA	False	NA	NA	NA	122660301	122660475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122660300_122660500
ES.29429.14	chr6	+	399	1	Intergenic	novelGene_24424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	9415	False	NA	NA	False	NA	NA	NA	122664020	122664419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122664000_122664400
ES.29429.15	chr6	+	134	1	FSM	ENSMUSG00000072789.5	ENSMUST00000121713.2	882	1	790	-42	790	42	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	122673749	122673883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122673700_122673900
ES.29429.16	chr6	+	178	1	Intergenic	novelGene_24426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGACATAAACAA	NA	False	NA	NA	False	NA	NA	NA	122678661	122678839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122678700_122678800
ES.29429.17	chr6	+	2911	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	-1023	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	2188.6816094398	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122683424	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684278_122684675_122684893_122688496_122688763_122689587_122689675_122690103
ES.29429.18	chr6	+	2756	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	-960	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1914.98231062326	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122683487	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684278_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.19	chr6	+	2091	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	-72	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	1911.10208714762	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684375	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684406_122684675_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.2	chr6	+	1025	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	-189	-3	-189	3	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTCTTTGTAATTTACAC	491	False	NA	27	True	AATAAA	-17	NA	122603179	122607234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
ES.29429.20	chr6	+	2012	5	FSM	ENSMUSG00000012396.13	ENSMUST00000112581.8	1995	5	-18	1	-18	-1	multi-exon	FALSE	canonical	2	7	junction_1	1913.25775837967	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684429	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122684476_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.22	chr6	+	2316	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	-97	-8	-18	8	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCCAGTGGGGTC	NA	False	NA	26	True	AATAAA	-27	NA	122684429	122691600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.23	chr6	+	2097	5	NNC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1916.27573368239	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684439	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684476_122684675_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.24	chr6	+	2056	5	FSM	ENSMUSG00000012396.13	ENSMUST00000112580.8	2011	5	-46	1	30	-1	multi-exon	FALSE	canonical	3	367	junction_1	1758.10842953442	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684477	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122684568_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.27	chr6	+	2096	5	NNC	ENSMUSG00000012396.13	novel	2011	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	1086	junction_1	1448.71328685147	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684532	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684568_122684675_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.28	chr6	+	2041	5	NNC	ENSMUSG00000012396.13	novel	2011	5	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	2186.52834134388	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684546	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684568_122684713_122684893_122688496_122688763_122689587_122689675_122690103
ES.29429.29	chr6	+	2265	2	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	25	-3633	intron_retention	TRUE	non_canonical	0	0	junction_1	0	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122684551	122687959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122686461_122687603
ES.29429.3	chr6	+	652	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	10	171	10	-171	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAACTTGTTAACCT	690	False	NA	NA	False	ATTAAA	-18	NA	122603378	122607060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
ES.29429.30	chr6	+	2021	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	26	164	26	-164	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	2293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAGCTTTCACCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	122684552	122691428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
ES.29429.31	chr6	+	3455	1	NIC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	26	-3585	mono-exon	FALSE	NA	NA	NA	NA	NA	2140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122684552	122688007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122684600_122688000
ES.29429.32	chr6	+	2390	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	26	-30	intron_retention	FALSE	canonical	0	0	junction_2	2174.20019777389	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATAAAACACTAAT	NA	False	NA	-12	True	NA	NA	NA	122684552	122691562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122687804_122688040_122688496_122688763_122689587_122689675_122690100
ES.29429.34	chr6	+	2608	3	ISM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	28	1	28	-1	intron_retention	FALSE	canonical	3	4542	junction_1	9.5	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684554	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122684893_122688496_122688763_122689587
ES.29429.36	chr6	+	4366	3	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	28	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	2280.5	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684554	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122686440_122688285_122688763_122689587
ES.29429.37	chr6	+	1113	1	NIC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	28	-5925	mono-exon	FALSE	NA	NA	NA	NA	NA	2128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGATTTTTCTGATTTA	NA	False	NA	NA	False	NA	NA	NA	122684554	122685667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122684600_122685700
ES.29429.38	chr6	+	2147	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	28	-30	intron_retention	FALSE	non_canonical	0	0	junction_1	2053.24139404558	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATAAAACACTAAT	NA	False	NA	-12	True	NA	NA	NA	122684554	122691562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122688502_122688763_122689587_122689675_122690100
ES.29429.39	chr6	+	3427	2	ISM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	28	7	28	-7	intron_retention	FALSE	canonical	3	4542	junction_1	0	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTAGTGGTCTTATCTT	NA	False	NA	11	True	AATAAA	-12	NA	122684554	122691585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122684893_122688496
ES.29429.4	chr6	+	1313	3	NIC	ENSMUSG00000046323.9	novel	833	4	NA	NA	10	-1	intron_retention	FALSE	canonical	3	943	junction_2	753.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGACTCTTTGTAATTT	690	False	NA	23	True	AATAAA	-13	NA	122603378	122607230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122603570_122605535_122606296_122606868
ES.29429.40	chr6	+	1916	3	NIC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	28	-1	intron_retention	FALSE	canonical	1	155	junction_1	1980.5	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684554	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122684893_122689587_122689675_122690100
ES.29429.41	chr6	+	3139	1	NIC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	42	-3885	mono-exon	FALSE	NA	NA	NA	NA	NA	2140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTATAAAAGGGAGATCTA	NA	False	NA	NA	False	NA	NA	NA	122684568	122687707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122684600_122687700
ES.29429.42	chr6	+	2056	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2048.1074190579	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684674	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122688496_122688763_122689593_122689675_122690100
ES.29429.43	chr6	+	2100	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	2043.38091298601	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684674	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684931_122688496_122688763_122689587_122689675_122690100
ES.29429.44	chr6	+	2036	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2053.24139404558	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGGTCTTATCTTTTG	NA	False	NA	14	True	AATAAA	-15	NA	122684674	122691588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122688519_122688763_122689587_122689675_122690100
ES.29429.46	chr6	+	1969	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2169.73379703594	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTAGTGGTCTTATCTT	NA	False	NA	11	True	AATAAA	-12	NA	122684674	122691585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122688496_122688765_122689587_122689675_122690100_122690201_122690289
ES.29429.47	chr6	+	1984	5	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2190.83823855163	2296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122684674	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122684893_122688496_122688763_122689587_122689675_122690103_122690230_122690304
ES.29429.48	chr6	+	174	1	Intergenic	novelGene_24428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	122687364	122687538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122687400_122687500
ES.29429.49	chr6	+	1582	2	ISM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	5057	1	5057	-1	3prime_fragment	FALSE	canonical	3	4116	junction_1	0	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTTATCTTTTGTCC	NA	False	NA	17	True	AATAAA	-18	NA	122689583	122691591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122689675_122690100
ES.29429.5	chr6	+	3225	3	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	471.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGACTCTTTGTAATTT	696	False	NA	23	True	AATAAA	-13	NA	122603384	122607230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122605820_122605867_122606296_122606868
ES.29429.50	chr6	+	176	1	Intergenic	novelGene_24429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAGCGTGACTC	1536	False	NA	NA	False	NA	NA	NA	122697509	122697685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122697500_122697700
ES.29429.51	chr6	+	1629	1	Antisense	novelGene_ENSMUSG00000003153.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122706192	122707821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_122706200_122707800
ES.29429.52	chr6	+	824	1	Intergenic	novelGene_24432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCCCAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	122732192	122733016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122732200_122733000
ES.29429.6	chr6	+	3340	6	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	18	127380	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	958.045844414556	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCCGGTTCAC	698	False	NA	NA	False	NA	NA	NA	122603386	122734611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122603570_122605535_122605820_122605867_122606296_122606868_122608928_122608981_122609196_122734439
ES.29429.7	chr6	+	2907	6	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	18	127390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	907.624019073978	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTTCACACTTTGAGTC	698	False	NA	NA	False	NA	NA	NA	122603386	122734621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868_122608928_122608981_122609196_122734439
ES.29429.8	chr6	+	1254	4	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1009.00379913391	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCTCGACTCTTTGTAA	698	False	NA	20	True	AATAAA	-10	NA	122603386	122607227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122603570_122605535_122605820_122605867_122606296_122606868
ES.29429.9	chr6	+	798	4	NNC	ENSMUSG00000046323.9	novel	833	4	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	519.357936943941	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGACTCTTTGTAATTT	729	False	NA	23	True	AATAAA	-13	NA	122603417	122607230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122603570_122605520_122605769_122606259_122606296_122606868
ES.2943.1	chr10	+	8109	1	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGGATGGGGGTGATAT	2234	False	NA	NA	False	NA	NA	NA	62674555	62682664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62674600_62682700
ES.2943.2	chr10	+	4235	4	Antisense	novelGene_ENSMUSG00000084569.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGATTCTCTAGAATT	2234	False	NA	NA	False	NA	NA	NA	62674555	62738410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62676160_62700588_62700639_62713928_62715913_62737813
ES.2943.3	chr10	+	3789	4	Antisense	novelGene_ENSMUSG00000112309.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAGAAAAGATCTGCCT	2235	False	NA	NA	False	NA	NA	NA	62674556	62728625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62676160_62700588_62700639_62713928_62715913_62728473
ES.2943.4	chr10	+	202	1	Intergenic	novelGene_2284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACAGGGCTGGCGGGA	NA	False	NA	NA	False	NA	NA	NA	62688492	62688694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62688500_62688700
ES.2943.5	chr10	+	175	1	Intergenic	novelGene_2285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAAAACACTGCT	NA	False	NA	NA	False	NA	NA	NA	62710738	62710913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62710700_62710900
ES.2943.6	chr10	+	2261	1	Antisense	novelGene_ENSMUSG00000047146.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62714565	62716826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_62714600_62716800
ES.2943.7	chr10	+	173	1	Intergenic	novelGene_2286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62727932	62728105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62727900_62728100
ES.2943.8	chr10	+	123	1	Intergenic	novelGene_2288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62734461	62734584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62734500_62734600
ES.29430.1	chr6	+	187	1	Intergenic	novelGene_24433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATAATAGTAACT	NA	False	NA	NA	False	NA	NA	NA	122737277	122737464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122737300_122737500
ES.29431.1	chr6	+	165	1	Intergenic	novelGene_24437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAAGTGAGG	6669	False	NA	NA	False	NA	NA	NA	122777370	122777535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_122777400_122777500
ES.29432.1	chr6	-	3163	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	-43	-993	-27	984	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGGATGAAGTGACTTC	8681	False	NA	NA	False	NA	NA	NA	122579373	122553766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ES.29432.10	chr6	-	1279	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	-58	906	15	-906	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGAGCTGGAGGTGT	8666	False	NA	NA	False	ACTAAA	-23	NA	122579388	122555665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ES.29432.12	chr6	-	3015	7	NIC	ENSMUSG00000040613.15	novel	2127	8	NA	NA	-26	-906	intron_retention	FALSE	canonical	3	36	junction_3	6.0667582410671	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGAGCTGGAGGTGT	8682	False	NA	NA	False	ACTAAA	-23	NA	122579372	122555665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ES.29432.13	chr6	-	1086	7	NIC	ENSMUSG00000040613.15	novel	2127	8	NA	NA	4	-907	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	15.004628915401	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAATTGAGCTGGAGGTG	8712	False	NA	NA	False	ACTAAA	-22	NA	122579342	122555666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122577016_122577085_122579215
ES.29432.14	chr6	-	2368	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	85	-328	85	328	multi-exon	FALSE	canonical	3	704	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGCATTGGTGTT	9932	False	NA	NA	False	TATAAA	-37	NA	122586961	122582033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122584095_122586654
ES.29432.15	chr6	-	2179	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-9	-45	-9	45	multi-exon	FALSE	canonical	3	704	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGTTTGATACTTTCC	9971	False	NA	NA	False	AATAGA	-16	NA	122587055	122582316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122584095_122586654
ES.29432.16	chr6	-	3209	2	FSM	ENSMUSG00000030117.6	ENSMUST00000204882.2	427	2	-167	-2615	96	-9	multi-exon	FALSE	canonical	3	20	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTACAGCAAGATTTT	9943	False	NA	NA	False	NA	NA	NA	122586950	122582370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122585284_122586654
ES.29432.17	chr6	-	1754	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	10	361	10	-361	multi-exon	FALSE	canonical	3	704	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTCACTTGTTTGT	9990	False	NA	-8	True	AATATA	-26	NA	122587036	122582722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122584095_122586654
ES.29432.18	chr6	-	1785	3	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	19	-374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTGAGCTTTAAAAATG	9999	False	NA	-21	True	AATATA	-13	NA	122587027	122582735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584095_122585230_122585284_122586654
ES.29432.19	chr6	-	1494	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	61	570	61	-570	multi-exon	FALSE	canonical	3	704	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAACAGGAAACATGGT	9908	False	NA	NA	False	NA	NA	NA	122586985	122582931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122584095_122586654
ES.29432.20	chr6	-	1453	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	-145	817	-145	-817	multi-exon	FALSE	canonical	3	704	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTGTCATCATGGTT	9835	False	NA	0	True	AATAAA	-40	NA	122587191	122583178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122584095_122586654
ES.29432.21	chr6	-	1752	3	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	-94	-845	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	2.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	9886	False	NA	-28	True	AATAAA	-12	NA	122587140	122583206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584095_122584905_122585284_122586654
ES.29432.22	chr6	-	1233	3	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	-56	-845	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	347	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	9924	False	NA	-28	True	AATAAA	-12	NA	122587102	122583206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122583418_122583520_122584095_122586654
ES.29432.23	chr6	-	3578	2	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	-39	-845	intron_retention	TRUE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	9998	False	NA	-28	True	AATAAA	-12	NA	122586822	122583206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584786_122584823
ES.29432.24	chr6	-	3557	1	NIC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	20	-845	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	-13	True	NA	-28	True	AATAAA	-12	NA	122586763	122583206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122583200_122586800
ES.29432.25	chr6	-	1070	2	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	247	-845	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGCTTATGCTCTCT	9984	False	NA	-28	True	AATAAA	-12	NA	122586536	122583206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584095_122586354
ES.29432.26	chr6	-	2242	2	FSM	ENSMUSG00000030117.6	ENSMUST00000204882.2	427	2	-38	-1777	-38	-847	multi-exon	FALSE	canonical	3	20	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTTGGCTTATGCTCT	9999	False	NA	-30	True	AATAAA	-10	NA	122586821	122583208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122585284_122586654
ES.29432.27	chr6	-	1277	3	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	58	-847	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	6	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTTGGCTTATGCTCT	9905	False	NA	-30	True	AATAAA	-10	NA	122586988	122583208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584095_122585226_122585284_122586654
ES.29432.28	chr6	-	1020	2	NNC	ENSMUSG00000030117.6	novel	2125	2	NA	NA	1733	-847	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTTGGCTTATGCTCT	9195	False	NA	-30	True	AATAAA	-10	NA	122585050	122583208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122584095_122584916
ES.29432.29	chr6	-	537	2	FSM	ENSMUSG00000030117.6	ENSMUST00000204882.2	427	2	-205	95	58	-95	multi-exon	FALSE	canonical	3	20	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGCCTGGTCTATAG	9905	False	NA	NA	False	AAGAAA	-25	NA	122586988	122585080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122585284_122586654
ES.29432.3	chr6	-	2879	10	Fusion	ENSMUSG00000040613.15_ENSMUSG00000030117.6	novel	2127	8	NA	NA	99	-29	multi-exon	FALSE	canonical	1	1	junction_8	210.152031974973	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACCCTGCAGTAAAAG	9946	False	NA	NA	False	NA	NA	NA	122586947	122554788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215_122579448_122583723_122584095_122586654
ES.29432.4	chr6	-	2150	7	NIC	ENSMUSG00000040613.15	novel	2265	8	NA	NA	-26	-47	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	18.3462076008458	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAGGAAAAGAAAAGA	8682	False	NA	NA	False	NA	NA	NA	122579372	122554806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122555895_122557646_122557766_122558311_122558710_122568045_122568220_122573590_122573737_122577016_122577085_122579215
ES.29432.5	chr6	-	2131	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112586.8	2265	8	30	104	-27	-95	multi-exon	FALSE	canonical	2	5	junction_5	14.3099793921613	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	8681	False	NA	NA	False	NA	NA	NA	122579373	122554854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016_122577085_122579215
ES.29432.6	chr6	-	1956	7	NIC	ENSMUSG00000040613.15	novel	2265	8	NA	NA	-26	-95	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	16.4890536080422	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	8682	False	NA	NA	False	NA	NA	NA	122579372	122554854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122573590_122573737_122577016_122577085_122579215
ES.29432.8	chr6	-	4257	7	NNC	ENSMUSG00000040613.15	novel	2127	8	NA	NA	-27	-95	intron_retention	FALSE	canonical	2	6	junction_5	14.682756326158	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	8681	False	NA	NA	False	NA	NA	NA	122579373	122554854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568215_122573590_122573737_122577016
ES.29432.9	chr6	-	3418	5	FSM	ENSMUSG00000040613.15	ENSMUST00000203309.3	666	5	-29	-2723	28	-906	multi-exon	FALSE	canonical	0	0	junction_3	17.8955301681733	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGAGCTGGAGGTGT	8679	False	NA	NA	False	ACTAAA	-23	NA	122579375	122555665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122558710_122565103_122565132_122568045_122568164_122577016_122577085_122579215
ES.29433.1	chr6	-	174	1	Intergenic	novelGene_24414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	8938	False	NA	NA	False	NA	NA	NA	122594159	122593985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122594000_122594200
ES.29434.1	chr6	-	156	1	Intergenic	novelGene_24415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATATAAAATAAAA	NA	False	NA	NA	False	AAAACA	-12	NA	122613230	122613074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122613100_122613200
ES.29435.1	chr6	-	178	1	Intergenic	novelGene_24416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTGTTTACAGCT	NA	False	NA	NA	False	NA	NA	NA	122619845	122619667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122619700_122619800
ES.29436.1	chr6	-	179	1	Intergenic	novelGene_24417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTGAGACAGG	8871	False	NA	NA	False	NA	NA	NA	122626504	122626325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122626300_122626500
ES.29437.1	chr6	-	203	1	Intergenic	novelGene_24418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGCACTGACAGAAGG	-2	True	NA	NA	False	NA	NA	NA	122633499	122633296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122633300_122633500
ES.29438.1	chr6	-	168	1	Intergenic	novelGene_24419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAACAAAACCTGA	8567	False	NA	NA	False	NA	NA	NA	122649213	122649045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122649000_122649200
ES.29439.1	chr6	-	232	1	Intergenic	novelGene_24420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTGCACGTAGCACTT	7311	False	NA	NA	False	ATTAAA	-24	NA	122650469	122650237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122650200_122650500
ES.2944.1	chr10	-	5005	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3946	1169	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	176.703083141853	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGCTGGTAAGCATG	NA	False	NA	NA	False	NA	NA	NA	62434114	62414860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62414918_62415093_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010
ES.2944.10	chr10	-	4038	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3811	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	176.703083141853	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	62434249	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434099_62434210
ES.2944.12	chr10	-	8861	11	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3963	3	intron_retention	FALSE	canonical	3	610	junction_8	47.013295991666	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	62434097	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62427782_62428788_62428907_62429740_62429920_62430814
ES.2944.13	chr10	-	4707	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	26	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	179.402821741966	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	62438034	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429732_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.14	chr10	-	6472	13	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-4	3	intron_retention	FALSE	canonical	3	474	junction_12	69.4111642477075	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	62438064	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.15	chr10	-	4663	16	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	174.091342563482	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	62438050	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434524_62434575_62434671_62437906
ES.2944.17	chr10	-	5247	1	Genic_Genomic	ENSMUSG00000020075.9	novel	NA	NA	NA	NA	4683	3	mono-exon	FALSE	NA	NA	NA	NA	NA	836	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGGTGGCTTTTATT	1164	False	NA	-2	True	AATAAA	-21	NA	62421273	62416026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62416000_62421300
ES.2944.2	chr10	-	5211	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-30	-459	-30	459	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGTGTATCTCTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	62438090	62415570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.20	chr10	-	6720	13	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-20	0	intron_retention	FALSE	canonical	3	474	junction_12	70.4530970851451	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTCTTGGTGGCTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	62438080	62416029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.21	chr10	-	4020	14	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3840	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	183.098802829601	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTCTTGGTGGCTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	62434220	62416029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426448_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010
ES.2944.22	chr10	-	5773	14	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	474	junction_13	68.8286612929862	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTAGTTCTTGGTGGCTT	NA	False	NA	-7	True	AATAAA	-16	NA	62438063	62416031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.26	chr10	-	5494	7	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	122	-3	intron_retention	FALSE	canonical	3	633	junction_4	38.6928790462649	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	False	NA	-8	True	AATAAA	-15	NA	62426628	62416032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62420545_62421303_62421464_62423242_62423317_62423782_62424598_62425556_62425707_62426399
ES.2944.27	chr10	-	4731	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	176.273514859199	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	False	NA	-8	True	AATAAA	-15	NA	62438078	62416032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423897_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.29	chr10	-	4560	14	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	13	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	183.632737409539	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	False	NA	-8	True	AATAAA	-15	NA	62438047	62416032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.30	chr10	-	5232	12	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3701	-4	intron_retention	FALSE	canonical	3	576	junction_7	45.9158410879069	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTAGTTCTTGGTGGC	NA	False	NA	-9	True	AATAAA	-14	NA	62434359	62416033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010
ES.2944.33	chr10	-	4516	16	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	91	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	174.091342563482	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTAGTTCTTGGTGGC	NA	False	NA	-9	True	AATAAA	-14	NA	62437969	62416033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434232_62434342_62434671_62437906
ES.2944.34	chr10	-	4745	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	179.620631967966	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTAGTTCTTGGTGGC	NA	False	NA	-9	True	AATAAA	-14	NA	62438093	62416033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425562_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.36	chr10	-	4680	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	208	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.703083141853	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTTAGTTCTTGGTG	NA	False	NA	-11	True	AATAAA	-12	NA	62437852	62416035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437734
ES.2944.37	chr10	-	4629	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-35	128	-35	-128	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTTTATGTTCCAG	NA	False	NA	-23	True	AATAAA	-19	NA	62438095	62416157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.39	chr10	-	4449	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-20	293	-20	-293	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGAAGTTTCTTTTGG	NA	False	NA	NA	False	AATGAA	-15	NA	62438080	62416322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.4	chr10	-	3684	7	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	220	5	intron_retention	FALSE	canonical	3	611	junction_1	49.1101369938586	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTGGCTTTTATTTT	NA	False	NA	0	True	AATAAA	-23	NA	62425736	62416024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556
ES.2944.40	chr10	-	2895	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-35	1862	-35	-1862	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTGTCGATCTTGT	NA	False	NA	-2	True	AGTAAA	-21	NA	62438095	62417891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.42	chr10	-	2983	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	177	-1863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.703083141853	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTGTGTCGATCTTG	NA	False	NA	-3	True	AGTAAA	-20	NA	62437883	62417892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437605
ES.2944.43	chr10	-	2313	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3670	-1864	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	176.703083141853	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGTGTGTCGATCTT	NA	False	NA	-4	True	AGTAAA	-19	NA	62434390	62417893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434105_62434215
ES.2944.44	chr10	-	4588	13	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	13	-1864	intron_retention	FALSE	canonical	3	474	junction_12	69.4111642477075	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGGTGTGTCGATCTT	NA	False	NA	-4	True	AGTAAA	-19	NA	62438047	62417893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.45	chr10	-	2837	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	12	-1865	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_14	174.975348117898	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGTGTGTCGATCT	NA	False	NA	-5	True	AGTAAA	-18	NA	62438048	62417894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434663_62437906
ES.2944.47	chr10	-	2799	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	10	-1865	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	177.741571745415	803	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGTGTGTCGATCT	NA	False	NA	-5	True	AGTAAA	-18	NA	62438050	62417894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426447_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.5	chr10	-	4041	15	NNC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	3811	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	176.703083141853	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTGGCTTTTATTTT	NA	False	NA	0	True	AATAAA	-23	NA	62434249	62416024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434121_62434231
ES.2944.6	chr10	-	6262	14	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-4	4	intron_retention	FALSE	canonical	3	474	junction_13	70.95327239744	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	62438064	62416025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.7	chr10	-	4972	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	-246	-4	-246	4	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	62438306	62416025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.2944.9	chr10	-	5298	14	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	-39	4	intron_retention	FALSE	canonical	3	474	junction_13	66.5056833448072	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGGTGGCTTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	62438099	62416025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ES.29440.1	chr6	-	161	1	Intergenic	novelGene_24422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122658391	122658230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122658200_122658400
ES.29441.1	chr6	-	300	1	Intergenic	novelGene_24425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTGTGTATGGTGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	122669486	122669186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122669200_122669500
ES.29442.1	chr6	-	3107	1	Antisense	novelGene_ENSMUSG00000072789.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAGGAAAGGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	122673693	122670586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_122670600_122673700
ES.29443.1	chr6	-	1526	2	Genic_Genomic	ENSMUSG00000080932.4	novel	615	1	NA	NA	-8297	50	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	122684284	122675322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_122676037_122683472
ES.29444.1	chr6	-	3735	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	19	19064	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3777.93291232123	8215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGAACCCATAAA	8932	False	NA	NA	False	NA	NA	NA	122719462	122685703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122685736_122704785_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713533_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.10	chr6	-	4280	7	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	7	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	3619.38894474376	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTATTTTTCCCCCT	8920	False	NA	-8	True	AATAAA	-25	NA	122719474	122704771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122710476_122716286_122716953_122717346_122717440_122719334
ES.29444.100	chr6	-	3627	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-2710	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	2889.29483899907	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9859	False	NA	-20	True	AATAAA	-13	NA	122722589	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122722535
ES.29444.101	chr6	-	3706	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3012.78332001047	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8920	False	NA	-20	True	AATAAA	-13	NA	122719474	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709425_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.102	chr6	-	3655	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705758_122705818_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.103	chr6	-	3309	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3013.30654281765	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706733_122708390_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.105	chr6	-	3706	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2991.63845854854	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8920	False	NA	-21	True	AATAAA	-12	NA	122719474	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713695_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.106	chr6	-	3660	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2978.29634373598	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709385_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.107	chr6	-	3708	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2978.29634373598	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709336_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.108	chr6	-	3669	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-867	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2889.91339525924	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9380	False	NA	-21	True	AATAAA	-12	NA	122720746	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122720649
ES.29444.109	chr6	-	3777	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_9	2840.75184796708	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9108	False	NA	-21	True	AATAAA	-12	NA	122719286	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719081
ES.29444.110	chr6	-	4968	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	8499	junction_2	719.917953224532	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.111	chr6	-	4002	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3640.94175317321	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	1468	False	NA	-21	True	AATAAA	-12	NA	122778500	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778148
ES.29444.113	chr6	-	3582	5	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	-782	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	3858.55733241065	8125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	NA	False	NA	-21	True	AATAAA	-12	NA	122710917	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122710218_122710445
ES.29444.114	chr6	-	3739	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2889.91339525924	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9135	False	NA	-21	True	AATAAA	-12	NA	122719259	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719092
ES.29444.115	chr6	-	3709	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2978.29634373598	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708550_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.116	chr6	-	3374	8	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3390.74877649556	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8920	False	NA	-21	True	AATAAA	-12	NA	122719474	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709410_122713560_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.118	chr6	-	3447	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705389_122705657_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.12	chr6	-	3925	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-601	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	2884.6558046171	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTATTTTTCCCCCT	9646	False	NA	-8	True	AATAAA	-25	NA	122720480	122704771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122720140
ES.29444.120	chr6	-	4059	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-570	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9677	False	NA	-21	True	AATAAA	-12	NA	122720449	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122719513_122720140
ES.29444.121	chr6	-	3543	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705253_122705424_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.123	chr6	-	4655	7	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3619.38894474376	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122710169_122715594_122716953_122717346_122717440_122719334
ES.29444.125	chr6	-	3416	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706105_122706403_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.127	chr6	-	3658	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3007.53043764038	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712532_122713556_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.128	chr6	-	2856	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8920	False	NA	-21	True	AATAAA	-12	NA	122719474	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705253_122706108_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.129	chr6	-	3722	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	921	0	at_least_one_novel_splicesite	FALSE	canonical	1	54	junction_9	2873.21389714818	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	NA	False	NA	-21	True	AATAAA	-12	NA	122718300	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122718150
ES.29444.13	chr6	-	3560	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAGCTTATTTTTCCCC	8917	False	NA	-10	True	AATAAA	-23	NA	122719477	122704773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705244_122705409_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.130	chr6	-	3662	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706153_122706205_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.131	chr6	-	3870	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4122.9445254575	8199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	1182	False	NA	-21	True	AATAAA	-12	NA	122778786	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709351_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778544
ES.29444.132	chr6	-	4393	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-600	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	2858.55012375155	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9647	False	NA	-21	True	AATAAA	-12	NA	122720479	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122719443_122719766
ES.29444.133	chr6	-	4750	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	166	junction_9	2838.58815106349	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9835	False	NA	-21	True	AATAAA	-12	NA	122719685	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122718507
ES.29444.134	chr6	-	5608	9	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_6	3170.31271131098	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122715472_122716428_122716953_122717346_122717440_122719334
ES.29444.135	chr6	-	3754	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-616	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2858.84094695735	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9631	False	NA	-21	True	AATAAA	-12	NA	122720495	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122719431_122720409
ES.29444.137	chr6	-	2993	7	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3621.03722095694	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709336_122714187_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.138	chr6	-	3514	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705491_122705691_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.139	chr6	-	3610	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3012.29495793162	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716897_122716953_122717346_122717440_122719334
ES.29444.14	chr6	-	3672	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTCACAAGCTTATTTT	8917	False	NA	-15	True	AATAAA	-18	NA	122719477	122704778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705201_122705249_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.140	chr6	-	4427	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-612	0	intron_retention	FALSE	canonical	1	1	junction_10	2858.55012375155	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	9635	False	NA	-21	True	AATAAA	-12	NA	122720491	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122720108_122720409
ES.29444.141	chr6	-	3707	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2952.84932075972	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716945_122717346_122717440_122719334
ES.29444.142	chr6	-	4683	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	8407	junction_1	771.069296091473	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.143	chr6	-	3706	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3013.30654281765	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707090_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.144	chr6	-	3670	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8917	False	NA	-21	True	AATAAA	-12	NA	122719477	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706605_122706649_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.145	chr6	-	3625	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2858.84094695735	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8916	False	NA	-21	True	AATAAA	-12	NA	122719478	122704784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708400_122708490_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.146	chr6	-	6412	5	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	3815	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	3904.15992084085	8129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	NA	False	NA	-22	True	AATAAA	-11	NA	122715406	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122710757_122711971_122712570_122713537
ES.29444.147	chr6	-	3528	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3001.09703810103	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	8917	False	NA	-22	True	AATAAA	-11	NA	122719477	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709789_122712522_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.148	chr6	-	3695	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3001.09703810103	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	8917	False	NA	-22	True	AATAAA	-11	NA	122719477	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709815_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.149	chr6	-	3610	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3156.53547223851	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	8919	False	NA	-22	True	AATAAA	-11	NA	122719475	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.15	chr6	-	6256	9	FSM	ENSMUSG00000003153.11	ENSMUST00000168704.8	6253	9	3	-6	3	6	multi-exon	FALSE	canonical	3	8407	junction_1	741.479591340854	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTCACAAGCTTATTTT	8916	False	NA	-15	True	AATAAA	-18	NA	122719478	122704778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122716953_122717346_122717440_122719334
ES.29444.150	chr6	-	2324	3	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	1679	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4203.5	8119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	NA	False	NA	-22	True	AATAAA	-11	NA	122708456	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706428_122706522_122707100_122708351
ES.29444.151	chr6	-	3741	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2889.91339525924	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	10010	False	NA	-22	True	AATAAA	-11	NA	122719510	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717434_122719334
ES.29444.152	chr6	-	3655	9	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2973.75028110549	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTCATGTCACAAGC	8917	False	NA	-22	True	AATAAA	-11	NA	122719477	122704785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122719300
ES.29444.153	chr6	-	4007	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	-2	intron_retention	FALSE	canonical	3	8407	junction_1	733.889456508949	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTCATGTCACAAG	8920	False	NA	-23	True	AATAAA	-10	NA	122719474	122704786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.154	chr6	-	3624	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTCATGTCACAAG	8920	False	NA	-23	True	AATAAA	-10	NA	122719474	122704786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705525_122705610_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.155	chr6	-	3641	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTGTCATGTCACAAG	8917	False	NA	-23	True	AATAAA	-10	NA	122719477	122704786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706124_122706195_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.157	chr6	-	3673	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3894.89407770522	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTGTCATGTCACAA	8916	False	NA	-24	True	AATAAA	-9	NA	122719478	122704787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709339_122709432_122709728_122709804_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.158	chr6	-	3364	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	227	368	4	-351	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACCCTGATGGACCTCA	8917	False	NA	NA	False	CATAAA	-5	NA	122719477	122705135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.159	chr6	-	3046	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	230	683	7	-666	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTCTGCTAGGTG	8920	False	NA	NA	False	NA	NA	NA	122719474	122705450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.16	chr6	-	3684	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2991.63845854854	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8916	False	NA	-19	True	AATAAA	-14	NA	122719478	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713667_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.160	chr6	-	2355	7	ISM	ENSMUSG00000003153.11	ENSMUST00000168704.8	6253	9	5412	775	-3934	-775	3prime_fragment	FALSE	canonical	3	8407	junction_1	434.273979060326	8082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTCTGTGCATTGTC	NA	False	NA	NA	False	NA	NA	NA	122714069	122705559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016
ES.29444.161	chr6	-	2828	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	905	3	-888	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTGTTTCCAGGTTCC	8916	False	NA	NA	False	NA	NA	NA	122719478	122705672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.162	chr6	-	2648	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	227	1084	4	1038	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGGTGTTGGTTTGTT	8917	False	NA	NA	False	NA	NA	NA	122719477	122705851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.163	chr6	-	2515	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	1218	3	904	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCGCTTTTTCTTTTCTG	8916	False	NA	NA	False	NA	NA	NA	122719478	122705985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.164	chr6	-	2401	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	1332	3	790	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	8036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTTTGTAGTTAGTGA	8916	False	NA	NA	False	ACTAAA	-20	NA	122719478	122706099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.165	chr6	-	2220	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	148	1591	-75	531	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	7986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGGTTGGAGGGAGG	9964	False	NA	NA	False	NA	NA	NA	122719556	122706358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.166	chr6	-	1730	9	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	-61	3542	-61	208	5prime_fragment	FALSE	canonical	3	8499	junction_2	719.917953224532	7838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTGACTCCAACACATTA	9755	False	NA	NA	False	ATTAAA	-22	NA	122719765	122708309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.167	chr6	-	175	1	Intergenic	novelGene_24431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7691	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122710523	122710348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122710300_122710500
ES.29444.168	chr6	-	158	2	Genic_Genomic	ENSMUSG00000003153.11	novel	6253	9	NA	NA	2885	-1850	multi-exon	FALSE	canonical	0	0	junction_1	0	7720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	122716336	122710367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_122710476_122716286
ES.29444.169	chr6	-	935	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	227	8952	4	324	5prime_fragment	FALSE	canonical	3	8555	junction_1	911.464145695753	7609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGTCTGCATCTAAGA	8917	False	NA	NA	False	AATACA	-18	NA	122719477	122713719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.17	chr6	-	3587	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3012.29495793162	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8920	False	NA	-19	True	AATAAA	-14	NA	122719474	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716918_122716953_122717346_122717440_122719334
ES.29444.170	chr6	-	501	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	226	9387	3	82	5prime_fragment	FALSE	canonical	3	8555	junction_1	911.464145695753	7562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCATTGGCATTTTCTG	8916	False	NA	NA	False	NA	NA	NA	122719478	122714154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.171	chr6	-	204	1	ISM	ENSMUSG00000003153.11	ENSMUST00000168704.8	6253	9	3145	11348	2885	659	mono-exon	FALSE	NA	NA	NA	NA	NA	7505	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122716336	122716132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122716100_122716300
ES.29444.172	chr6	-	3328	1	Intergenic	novelGene_24434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTCAGGGTGGTGTTG	276	False	NA	NA	False	ATTAAA	-11	NA	122742242	122738914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122738900_122742200
ES.29444.173	chr6	-	180	1	Intergenic	novelGene_24435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGAGGCTAAT	3982	False	NA	NA	False	NA	NA	NA	122766275	122766095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122766100_122766300
ES.29444.174	chr6	-	203	1	Intergenic	novelGene_24436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCATGTGGTAGAATAC	3797	False	NA	NA	False	NA	NA	NA	122776171	122775968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122776000_122776200
ES.29444.18	chr6	-	3703	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3007.53043764038	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712552_122713533_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.19	chr6	-	3739	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3012.08178286491	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707122_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.2	chr6	-	199	1	Intergenic	novelGene_24427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	122686539	122686340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122686300_122686500
ES.29444.21	chr6	-	7535	7	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	2	intron_retention	FALSE	canonical	3	8407	junction_1	830.968594807021	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122716953_122717346_122717440_122719334
ES.29444.22	chr6	-	3788	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	97	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3640.94175317321	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	1466	False	NA	-19	True	AATAAA	-14	NA	122778502	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778366
ES.29444.23	chr6	-	3625	10	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	46	junction_9	2875.68769660321	8158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8340	False	NA	-19	True	AATAAA	-14	NA	122756927	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122756876
ES.29444.24	chr6	-	4044	12	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-642	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4196.77532248726	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	9605	False	NA	-19	True	AATAAA	-14	NA	122720521	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714260_122716791_122716953_122717346_122717440_122719334_122719431_122719664_122719925_122720409
ES.29444.25	chr6	-	3657	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705177_122705236_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.26	chr6	-	3649	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706083_122706150_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.27	chr6	-	3706	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2991.63845854854	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8921	False	NA	-19	True	AATAAA	-14	NA	122719473	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713703_122714025_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.28	chr6	-	6365	4	ISM	ENSMUSG00000003153.11	ENSMUST00000168704.8	6253	9	6011	-2	-3335	2	intron_retention	FALSE	canonical	3	8407	junction_1	551.880019166807	8126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	NA	False	NA	-19	True	AATAAA	-14	NA	122713470	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728
ES.29444.29	chr6	-	4035	12	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-180	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4054.91458980069	8199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	1189	False	NA	-19	True	AATAAA	-14	NA	122778779	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122752940_122753089_122774760_122774839_122778544
ES.29444.3	chr6	-	158	2	Genic_Genomic	ENSMUSG00000003153.11	novel	6253	9	NA	NA	2885	18412	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	122716336	122686355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_122686382_122716204
ES.29444.31	chr6	-	6578	5	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	-4535	2	intron_retention	FALSE	canonical	3	8407	junction_1	465.068543335281	8129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	NA	False	NA	-19	True	AATAAA	-14	NA	122714670	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122712570_122713537_122713701_122714016
ES.29444.33	chr6	-	3491	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705455_122705680_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.34	chr6	-	3894	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	177	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	3640.94175317321	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	1546	False	NA	-19	True	AATAAA	-14	NA	122778422	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778180
ES.29444.36	chr6	-	3967	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-542	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	3637.95830102545	8199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	827	False	NA	-19	True	AATAAA	-14	NA	122779141	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778826
ES.29444.38	chr6	-	3476	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3170.31271131098	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122716791_122716953_122717346_122717440_122719334
ES.29444.39	chr6	-	3660	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8920	False	NA	-19	True	AATAAA	-14	NA	122719474	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706421_122706474_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.4	chr6	-	231	1	Intergenic	novelGene_24430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAATGCTGTC	650	False	NA	45	True	NA	NA	NA	122698414	122698183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122698200_122698400
ES.29444.40	chr6	-	3677	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-633	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	2884.34654430676	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	9614	False	NA	-19	True	AATAAA	-14	NA	122720512	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122720409
ES.29444.44	chr6	-	3528	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705463_122705651_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.47	chr6	-	3585	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	8917	False	NA	-19	True	AATAAA	-14	NA	122719477	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705147_122705278_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.48	chr6	-	3931	11	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-224	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	3638.15710078606	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATGTCACAAGCTTA	1145	False	NA	-19	True	AATAAA	-14	NA	122778823	122704782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778544
ES.29444.49	chr6	-	3948	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-469	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	3639.74799814493	8199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	900	False	NA	-20	True	AATAAA	-13	NA	122779068	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778771
ES.29444.5	chr6	-	4505	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-545	28	intron_retention	FALSE	canonical	0	0	junction_10	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTGGGCTTTAAAAAACAA	9702	False	NA	24	True	NA	NA	NA	122720424	122704739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122720108_122720309
ES.29444.50	chr6	-	3472	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8916	False	NA	-20	True	AATAAA	-13	NA	122719478	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705216_122705460_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.51	chr6	-	5761	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-558	1	intron_retention	FALSE	canonical	0	0	junction_9	2889.91339525924	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9689	False	NA	-20	True	AATAAA	-13	NA	122720437	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122718249
ES.29444.52	chr6	-	4035	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	1	1	intron_retention	FALSE	canonical	3	8407	junction_1	783.442393782083	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8914	False	NA	-20	True	AATAAA	-13	NA	122719480	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.53	chr6	-	3636	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	1187	1	at_least_one_novel_splicesite	FALSE	canonical	2	105	junction_9	2857.44508172278	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	NA	False	NA	-20	True	AATAAA	-13	NA	122718034	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122717971
ES.29444.54	chr6	-	3709	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2952.84932075972	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717353_122717440_122719334
ES.29444.55	chr6	-	3697	10	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3012.29495793162	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714223_122716775_122716953_122717346_122717440_122719334
ES.29444.57	chr6	-	3647	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	6777	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2889.91339525924	8158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8703	False	NA	-20	True	AATAAA	-13	NA	122750139	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122750065
ES.29444.58	chr6	-	3736	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	52	1	at_least_one_novel_splicesite	FALSE	canonical	2	96	junction_9	2860.22760468766	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9693	False	NA	-20	True	AATAAA	-13	NA	122719827	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719664
ES.29444.59	chr6	-	3561	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8920	False	NA	-20	True	AATAAA	-13	NA	122719474	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705500_122705651_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.6	chr6	-	6589	8	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	3	6	intron_retention	FALSE	canonical	3	8407	junction_1	792.626864885853	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCCCCTCTTGTTCTTT	8916	False	NA	2	True	AATAAA	-35	NA	122719478	122704761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122716953_122717346_122717440_122719334
ES.29444.60	chr6	-	4798	7	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3619.38894474376	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8916	False	NA	-20	True	AATAAA	-13	NA	122719478	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122710240_122715524_122716953_122717346_122717440_122719334
ES.29444.61	chr6	-	3686	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3001.09703810103	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709804_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.62	chr6	-	3685	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9857	False	NA	-20	True	AATAAA	-13	NA	122719663	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334_122719431_122719647
ES.29444.64	chr6	-	5736	9	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_6	3170.31271131098	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122715489_122716318_122716953_122717346_122717440_122719334
ES.29444.68	chr6	-	3624	10	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3012.29495793162	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8920	False	NA	-20	True	AATAAA	-13	NA	122719474	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714130_122716752_122716953_122717346_122717440_122719334
ES.29444.69	chr6	-	3533	9	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3156.53547223851	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8919	False	NA	-20	True	AATAAA	-13	NA	122719475	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708477_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.71	chr6	-	2514	2	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	-80	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9959	False	NA	-20	True	AATAAA	-13	NA	122719561	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707090_122719353
ES.29444.72	chr6	-	3665	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706070_122706120_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.73	chr6	-	3151	7	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	3543.09113706599	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122717346_122717440_122719334
ES.29444.75	chr6	-	3506	9	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3174.50077768143	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8920	False	NA	-20	True	AATAAA	-13	NA	122719474	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709815_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.76	chr6	-	3555	9	FSM	ENSMUSG00000003153.11	ENSMUST00000166135.8	1321	9	-128	-2106	4	1	multi-exon	FALSE	canonical	2	11	junction_7	3124.24898975738	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122717346_122717440_122719334
ES.29444.77	chr6	-	3736	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-600	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3649.04722359139	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9647	False	NA	-20	True	AATAAA	-13	NA	122720479	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122720140_122720234_122720409
ES.29444.79	chr6	-	3812	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	-586	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3652.21669127121	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9661	False	NA	-20	True	AATAAA	-13	NA	122720465	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719924_122720108_122720409
ES.29444.81	chr6	-	3814	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3712.93264280407	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717068_122717167_122717346_122717440_122719334
ES.29444.82	chr6	-	3827	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	177	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	3639.74799814493	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	1546	False	NA	-20	True	AATAAA	-13	NA	122778422	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778246
ES.29444.84	chr6	-	3512	9	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	1	28	junction_1	3148.67840331464	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_122707100_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.85	chr6	-	3644	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8916	False	NA	-20	True	AATAAA	-13	NA	122719478	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706654_122706726_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.86	chr6	-	3681	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706678_122706712_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.88	chr6	-	3302	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705252_122705665_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.9	chr6	-	3717	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3012.29495793162	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTATTTTTCCCCCTCT	8917	False	NA	-6	True	AATAAA	-27	NA	122719477	122704769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714245_122716791_122716953_122717346_122717440_122719334
ES.29444.91	chr6	-	3696	12	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	237	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4047.56212311755	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	1606	False	NA	-20	True	AATAAA	-13	NA	122778362	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706532_122706602_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778246
ES.29444.92	chr6	-	3963	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	7	1	intron_retention	FALSE	non_canonical	0	0	junction_1	2991.63845854854	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8920	False	NA	-20	True	AATAAA	-13	NA	122719474	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706466_122706531_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.93	chr6	-	3576	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8916	False	NA	-20	True	AATAAA	-13	NA	122719478	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122706129_122706269_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.94	chr6	-	4272	7	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	3619.38894474376	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122710381_122716190_122716953_122717346_122717440_122719334
ES.29444.95	chr6	-	3710	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3013.30654281765	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708357_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.96	chr6	-	3624	10	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2889.91339525924	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	9822	False	NA	-20	True	AATAAA	-13	NA	122719698	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719647
ES.29444.97	chr6	-	3366	8	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3372.5913914789	8154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122707056_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29444.98	chr6	-	1230	2	NNC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	4024	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	NA	False	NA	-20	True	AATAAA	-13	NA	122706111	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705813_122705910
ES.29444.99	chr6	-	3411	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2858.84094695735	8154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATGTCACAAGCTT	8917	False	NA	-20	True	AATAAA	-13	NA	122719477	122704783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_122705747_122706051_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ES.29445.1	chr6	-	158	1	Intergenic	novelGene_24438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	122786295	122786137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122786100_122786300
ES.29446.1	chr6	+	1461	1	FSM	ENSMUSG00000107868.2	ENSMUST00000204407.2	2368	1	0	907	0	-907	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAACAACAATTAAA	NA	False	NA	NA	False	NA	NA	NA	122788128	122789589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122788100_122789600
ES.29447.1	chr6	+	5323	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	-42	2	-42	-2	multi-exon	TRUE	canonical	3	21	junction_1	4.4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCTAGTTTTTATGT	2535	False	NA	73	True	AATAAA	-18	NA	122796830	122822323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29447.3	chr6	+	2993	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	1	2289	1	-2264	multi-exon	FALSE	canonical	3	21	junction_1	4.4	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGGTTACATACTGCCC	2578	False	NA	NA	False	NA	NA	NA	122796873	122820036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29447.4	chr6	+	1722	2	ISM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	6	16539	6	-4472	5prime_fragment	FALSE	canonical	3	21	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTATCATGGAAACACTA	2583	False	NA	NA	False	NA	NA	NA	122796878	122805786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122797930_122805115
ES.29447.5	chr6	+	5082	12	NNC	ENSMUSG00000003154.16	novel	4620	12	NA	NA	133	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.64236519799838	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAGAAAAGAA	2710	False	NA	50	True	NA	NA	NA	122797005	122822300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122797623_122797665_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29447.6	chr6	+	4293	11	NNC	ENSMUSG00000003154.16	novel	693	5	NA	NA	-65	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.47584804016684	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCTAGTTTTTATGT	9273	False	NA	73	True	AATAAA	-18	NA	122803568	122822323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122803638_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29447.7	chr6	+	4430	11	NNC	ENSMUSG00000003154.16	novel	693	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.88382517044894	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGTTTTTATGTTA	9332	False	NA	75	True	AATAAA	-20	NA	122803627	122822325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122803832_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29447.8	chr6	+	4200	10	ISM	ENSMUSG00000003154.16	ENSMUST00000177927.4	4620	12	7644	3	1480	-3	3prime_fragment	FALSE	canonical	3	27	junction_5	3.32591767713239	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAATAAAAAAAAAGAAAA	NA	False	NA	47	True	NA	NA	NA	122805113	122822297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ES.29448.1	chr6	+	2413	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	65	-2	-10	2	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCATCTTTTAGT	853	False	NA	11	True	ATTAAA	-17	NA	122851497	122865902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.10	chr6	+	2883	7	ISM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	78	0	3	0	intron_retention	FALSE	canonical	3	524	junction_5	26.8245327183076	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	866	False	NA	9	True	ATTAAA	-15	NA	122851510	122865900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710
ES.29448.11	chr6	+	11222	1	NIC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	3	-3168	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTGAAAGAAATCTTGT	866	False	NA	NA	False	AAAAAG	-13	NA	122851510	122862732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122851500_122862700
ES.29448.12	chr6	+	2447	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	194.718006462721	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	868	False	NA	10	True	ATTAAA	-16	NA	122851512	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858409_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.13	chr6	+	2451	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	193.677935906863	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	873	False	NA	10	True	ATTAAA	-16	NA	122851517	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858400_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.14	chr6	+	3007	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.064719767464	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTATTGGTTTTTCA	873	False	NA	2	True	ATTAAA	-8	NA	122851517	122865893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122857836_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.15	chr6	+	3128	7	NIC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	520	junction_6	28.4644027202789	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	874	False	NA	9	True	ATTAAA	-15	NA	122851518	122865900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122851623_122857371_122857473_122857616_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.16	chr6	+	1108	9	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	183.742176704207	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	875	False	NA	10	True	ATTAAA	-16	NA	122851519	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298_122864364_122865645
ES.29448.17	chr6	+	2473	9	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.978514663292	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTATTGGTTTTTCA	876	False	NA	2	True	ATTAAA	-8	NA	122851520	122865893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122852482_122852575_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.19	chr6	+	2244	1	Genic_Genomic	ENSMUSG00000030327.9	novel	NA	NA	NA	NA	12118	1	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	NA	False	NA	10	True	ATTAAA	-16	NA	122863657	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_122863700_122865900
ES.29448.2	chr6	+	2429	9	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-5	34660	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	186.359028490707	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGAACGAAACCACCC	858	False	NA	NA	False	NA	NA	NA	122851502	122900560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298_122865900_122900536
ES.29448.20	chr6	+	2502	9	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-2427	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.56474646815063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122896379	122911565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122896613_122897490_122897572_122897710_122898430_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.21	chr6	+	6544	6	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-2276	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.98888202169769	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122896530	122911565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122899039_122901675_122903339_122903748_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.22	chr6	+	1574	8	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-2248	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.32628499654255	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122896558	122911565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122896613_122897710_122897762_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.23	chr6	+	1514	7	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-871	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.09149072929224	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGTGTGTGTAAACT	NA	False	NA	NA	False	NA	NA	NA	122897935	122911572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122897974_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.24	chr6	+	1588	7	NNC	ENSMUSG00000049037.9	novel	1558	6	NA	NA	-688	-13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.84573486395988	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122898118	122911565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122898238_122898882_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.25	chr6	+	1584	6	FSM	ENSMUSG00000049037.9	ENSMUST00000060484.9	1558	6	-39	13	-39	-13	multi-exon	FALSE	canonical	2	8	junction_2	6.56048778674269	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGATCTGATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	122898767	122911565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ES.29448.3	chr6	+	2580	1	NIC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-4	1051	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAAGAAAAGA	859	False	NA	NA	False	NA	NA	NA	122851503	122854083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122851500_122854100
ES.29448.4	chr6	+	2323	7	NIC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	203.737917160476	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	860	False	NA	10	True	ATTAAA	-16	NA	122851504	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122851623_122857371_122857473_122857616_122857722_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ES.29448.5	chr6	+	2613	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	253.420437943247	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	860	False	NA	9	True	ATTAAA	-15	NA	122851504	122865900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122860116_122860182_122863710_122863814_122864298
ES.29448.6	chr6	+	6158	7	NIC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	520	junction_6	28.6976576667078	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	860	False	NA	9	True	ATTAAA	-15	NA	122851504	122865900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122863814_122864298
ES.29448.8	chr6	+	2323	8	NNC	ENSMUSG00000030327.9	novel	2476	8	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	198.799560628595	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	866	False	NA	10	True	ATTAAA	-16	NA	122851510	122865901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863738_122864298
ES.29449.1	chr6	-	10325	1	Antisense	novelGene_ENSMUSG00000030327.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCACTGACTCTGGGAA	NA	False	NA	NA	False	NA	NA	NA	122862605	122852280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_122852300_122862600
ES.29449.2	chr6	-	6022	2	Antisense	novelGene_ENSMUSG00000030327.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCACTGACTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	122858668	122852281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_122855439_122855803
ES.29449.3	chr6	-	173	1	Intergenic	novelGene_24439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGAGCAAGCGGGGTC	NA	False	NA	NA	False	NA	NA	NA	122862140	122861967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122862000_122862100
ES.2945.1	chr10	-	2743	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	2	-210	2	90	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGGTGTGCAAGCAGT	8108	False	NA	NA	False	AATAGA	-11	NA	62486995	62451583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.10	chr10	-	2586	16	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	90.1945058686442	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGTGTTAAGAGTTTT	8105	False	NA	-13	True	ATTAAA	-26	NA	62486998	62451795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482750_62482981_62483312_62483423_62486803
ES.2945.11	chr10	-	2891	10	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-839	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.7741795445646	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTGTTAAGAGTTT	8996	False	NA	-14	True	ATTAAA	-25	NA	62477782	62451796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523
ES.2945.12	chr10	-	9961	14	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-398	-4	intron_retention	FALSE	canonical	3	70	junction_13	56.8887630463763	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTGTGTTAAGAGTT	9877	False	NA	-15	True	ATTAAA	-24	NA	62487395	62451797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62482981_62483312
ES.2945.13	chr10	-	2487	15	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-11	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	93.5771263259808	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATTCTGTGTTAAGA	8095	False	NA	-18	True	ATTAAA	-21	NA	62487008	62451800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.14	chr10	-	2641	17	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	100.760545353824	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8167	False	NA	-19	True	ATTAAA	-20	NA	62486936	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62477815_62477881_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.15	chr10	-	4834	13	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-52	-8	intron_retention	FALSE	canonical	3	212	junction_9	25.0880394256351	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8054	False	NA	-19	True	ATTAAA	-20	NA	62487049	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62479152_62482692_62482981_62486803
ES.2945.16	chr10	-	2622	16	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.174748269668	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8128	False	NA	-19	True	ATTAAA	-20	NA	62486975	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482750_62482981_62483763_62483939_62486803
ES.2945.17	chr10	-	4510	15	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-3	-8	intron_retention	FALSE	non_canonical	0	0	junction_14	84.281991443206	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8148	False	NA	-19	True	ATTAAA	-20	NA	62486955	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62478734_62479075_62479152_62482692_62482981_62483312_62483425_62486803
ES.2945.18	chr10	-	2470	15	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	68.9300147887371	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8105	False	NA	-19	True	ATTAAA	-20	NA	62486998	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482750_62482981_62486803
ES.2945.19	chr10	-	2637	17	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	101.396171494539	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTCTGTGTTAAG	8151	False	NA	-19	True	ATTAAA	-20	NA	62486952	62451801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62477815_62477861_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.2	chr10	-	2742	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	4	-19	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCATTCTTTCATGTGA	8110	False	NA	90	True	TATAAA	-12	NA	62486993	62451692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.20	chr10	-	4713	16	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-5	-10	intron_retention	FALSE	canonical	1	1	junction_14	99.5750080201966	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTATTCTGTGTTA	8116	False	NA	-21	True	ATTAAA	-18	NA	62486987	62451803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62483763_62483939_62486803
ES.2945.21	chr10	-	2319	14	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.0549645412342	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTATTCTGTGTTA	8116	False	NA	-21	True	ATTAAA	-18	NA	62486987	62451803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452262_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.23	chr10	-	2587	16	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	88.6264570480446	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTGTTTTTATTCTGT	8105	False	NA	-25	True	ATTAAA	-14	NA	62486998	62451807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62477815_62477881_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.24	chr10	-	5819	8	ISM	ENSMUSG00000020076.8	ENSMUST00000218372.2	2375	16	11141	-196	2552	-15	3prime_fragment	FALSE	canonical	3	235	junction_7	18.9349046008924	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTGTTTTTATTCTG	3534	False	NA	-26	True	ATTAAA	-13	NA	62474391	62451808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755
ES.2945.25	chr10	-	6513	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	0	-15	intron_retention	FALSE	canonical	3	67	junction_13	75.0405018844952	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTGTTTTTATTCTG	8106	False	NA	-26	True	ATTAAA	-13	NA	62486997	62451808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62482981_62483312_62483423_62486803
ES.2945.26	chr10	-	2656	16	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.0064248964289	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTGTTTTTATTCTG	8105	False	NA	-26	True	ATTAAA	-13	NA	62486998	62451808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62468858_62468994_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.27	chr10	-	5443	11	ISM	ENSMUSG00000020076.8	ENSMUST00000218372.2	2375	16	5231	-196	3259	-15	intron_retention	FALSE	canonical	3	212	junction_9	24.5578907889094	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTGTTTTTATTCTG	6477	False	NA	-26	True	ATTAAA	-13	NA	62480301	62451808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523
ES.2945.28	chr10	-	3788	16	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	7	-16	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_11	104.068481726644	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTCTGTTTTTATTCT	8128	False	NA	-27	True	ATTAAA	-12	NA	62486975	62451809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62477881_62478554_62478734_62479075_62479152_62482750_62482981_62483312_62483423_62486803
ES.2945.3	chr10	-	2548	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-14	1	-14	-1	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8092	False	NA	-12	True	ATTAAA	-27	NA	62487011	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.31	chr10	-	3365	9	NNC	ENSMUSG00000020076.8	novel	1500	3	NA	NA	-12	4703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.472449009208	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGTGTATGCTTTTA	8139	False	NA	NA	False	NA	NA	NA	62486964	62471570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62473672_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.32	chr10	-	5345	6	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-3	4394	intron_retention	FALSE	canonical	3	233	junction_5	19.5714077163601	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTGTGTCCCTGCCA	8148	False	NA	NA	False	AGTAAA	-2	NA	62486955	62471879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.33	chr10	-	1134	6	ISM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	-10	24349	-10	131	5prime_fragment	FALSE	canonical	3	233	junction_5	19.5714077163601	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACCTTGTCTCCTGGTA	8096	False	NA	NA	False	TATAAA	-27	NA	62487007	62476142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ES.2945.34	chr10	-	1332	1	FSM	ENSMUSG00000020076.8	ENSMUST00000218224.2	2681	1	-432	1781	-387	-1781	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAACCCGAAAAATAGA	9888	False	NA	NA	False	NA	NA	NA	62487384	62486052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62486100_62487400
ES.2945.4	chr10	-	2668	16	NNC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.5054713096594	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8147	False	NA	-12	True	ATTAAA	-27	NA	62486956	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483763_62483939_62486803
ES.2945.5	chr10	-	2644	16	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8106	False	NA	-12	True	ATTAAA	-27	NA	62486997	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.6	chr10	-	3848	16	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_11	90.4093407170348	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8141	False	NA	-12	True	ATTAAA	-27	NA	62486962	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62477881_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.7	chr10	-	2469	14	NIC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	109.90092364376	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8090	False	NA	-12	True	ATTAAA	-27	NA	62487013	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62452296_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
ES.2945.9	chr10	-	4500	15	NNC	ENSMUSG00000020076.8	novel	2375	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	12	junction_12	92.2823141788506	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	8105	False	NA	-12	True	ATTAAA	-27	NA	62486998	62451794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62478734_62479075_62479152_62482750_62482981_62483312_62483423_62486803
ES.29450.1	chr6	-	178	1	Intergenic	novelGene_24440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	122908530	122908352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_122908400_122908500
ES.29451.1	chr6	+	1405	7	FSM	ENSMUSG00000043832.14	ENSMUST00000117173.8	1165	7	-240	0	-240	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGACTTGATGT	234	False	NA	NA	False	NA	NA	NA	122929233	122946834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_122929500_122929764_122929909_122930994_122931112_122941205_122941308_122943380_122943536_122944411_122944525_122946326
ES.29452.1	chr6	+	2960	1	Intergenic	novelGene_24441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	5011	False	NA	NA	False	NA	NA	NA	123658501	123661461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_123658500_123661500
ES.29453.1	chr6	-	1523	2	Intergenic	novelGene_24442	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCCTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	123674360	123671457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_123672303_123673682
ES.29454.1	chr6	-	1429	4	Fusion	ENSMUSG00000072778.4_ENSMUSG00000107718.3	novel	1368	7	NA	NA	19970	17677	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTTTTACAATGAATCT	NA	False	NA	NA	False	NA	NA	NA	124188845	124149037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_124150055_124174179_124174304_124177457_124177683_124188782
ES.29455.1	chr6	+	156	1	Intergenic	novelGene_24443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124365453	124365609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124365500_124365600
ES.29456.1	chr6	-	3825	17	NNC	ENSMUSG00000005069.13	novel	3148	16	NA	NA	-10156	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	47.6985570405437	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTGCTGACGTTGGGGT	NA	False	NA	4	True	AATAAA	-21	NA	124402182	124373770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124392790_124393025_124401471_124401660_124401762
ES.29456.10	chr6	-	3577	15	NNC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	-33	-9	intron_retention	FALSE	non_canonical	0	0	junction_11	36.8965044525403	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAACTGGACTGACG	NA	False	NA	-25	True	AATAAA	-20	NA	124392059	124373799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381680_124382125_124382232_124390227_124390358_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.11	chr6	-	3571	8	NIC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	139	-9	intron_retention	FALSE	canonical	3	117	junction_6	7.9179465488863	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAACTGGACTGACG	NA	False	NA	-25	True	AATAAA	-20	NA	124382187	124373799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376889_124377046_124377191_124380074_124380195_124380770_124381680_124382125
ES.29456.13	chr6	-	2997	14	NIC	ENSMUSG00000005069.13	novel	3073	15	NA	NA	13	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	34.6739675213068	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATAAACTGGACTG	NA	False	NA	-28	True	AATAAA	-17	NA	124392013	124373802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124391245_124391410_124391931
ES.29456.14	chr6	-	3353	17	NNC	ENSMUSG00000005069.13	novel	3148	16	NA	NA	-10205	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	48.3268494214138	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATAAACTGGACTG	NA	False	NA	-28	True	AATAAA	-17	NA	124402231	124373802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124392790_124393025_124401467_124401552_124402147
ES.29456.15	chr6	-	3404	14	NIC	ENSMUSG00000005069.13	novel	3073	15	NA	NA	14	-14	intron_retention	FALSE	canonical	3	93	junction_7	13.2865550229809	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAGAATAAACTGGAC	NA	False	NA	-30	True	AATAAA	-15	NA	124391982	124373804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.17	chr6	-	8297	7	NIC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	-1709	-15	intron_retention	FALSE	canonical	3	117	junction_5	8.51306185941476	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATGAAGAATAAACTGGA	NA	False	NA	-31	True	AATAAA	-14	NA	124384035	124373805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376889_124377046_124380195_124380770_124381680_124382125
ES.29456.2	chr6	-	3134	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	-76	15	-76	0	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124392102	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.4	chr6	-	3117	16	NNC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.7422248887918	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124391983	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377182_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.5	chr6	-	3314	17	NNC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.0398767005187	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124392013	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124385329_124385488_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.6	chr6	-	3255	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	-116	0	-86	0	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124392112	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ES.29456.7	chr6	-	3472	18	NNC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	-10205	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	50.4216820500987	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124402231	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124392790_124393025_124401471_124401552_124402147
ES.29456.8	chr6	-	3166	16	NIC	ENSMUSG00000005069.13	novel	3139	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	40.7490967861729	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124391817	124373790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391725
ES.29456.9	chr6	-	3347	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	-292	20	-88	-5	multi-exon	FALSE	canonical	2	3	junction_14	32.7566787083184	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGGACTGACGTGGG	NA	False	NA	-21	True	AATAAA	-24	NA	124392114	124373795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391725
ES.29457.1	chr6	-	3986	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	28	0	28	0	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	8468	False	NA	NA	False	AATAAA	-15	NA	124441725	124407717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
ES.29457.3	chr6	-	4096	17	NIC	ENSMUSG00000008153.13	novel	4014	18	NA	NA	53	0	intron_retention	FALSE	canonical	2	7	junction_16	12.9106000538317	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	8493	False	NA	NA	False	AATAAA	-15	NA	124441700	124407717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
ES.29457.4	chr6	-	1464	4	NNC	ENSMUSG00000008153.13	novel	1687	4	NA	NA	-424	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.09624744987	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAAAGTTCTTGCTTGC	4171	False	NA	NA	False	AATAAA	-7	NA	124410886	124407725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124408692_124408916_124409120_124409645_124409885_124410830
ES.29457.5	chr6	-	3885	18	NNC	ENSMUSG00000008153.13	novel	3703	18	NA	NA	-9797	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	13.1777835480309	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAACTAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	124451550	124407738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124451284
ES.29457.7	chr6	-	990	2	NNC	ENSMUSG00000008153.13	novel	728	3	NA	NA	1602	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAACTAGAAAAA	6200	False	NA	NA	False	NA	NA	NA	124408857	124407738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124408692_124408820
ES.29457.8	chr6	-	2531	11	NNC	ENSMUSG00000008153.13	novel	3703	18	NA	NA	-3718	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.5145653671451	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAACTAGAAAAA	5535	False	NA	NA	False	NA	NA	NA	124430849	124407738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426621_124426732_124426891_124427664_124427719_124428264_124428428_124430701
ES.29457.9	chr6	-	2458	11	NNC	ENSMUSG00000008153.13	novel	3703	18	NA	NA	-3669	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.3883072493371	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATAAAACAACTAGAAAA	5584	False	NA	NA	False	NA	NA	NA	124430800	124407739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124430701
ES.29458.1	chr6	+	2511	1	Intergenic	novelGene_24444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACCTCCTCCTGTGTTTG	NA	False	NA	NA	False	TTTAAA	-14	NA	124451819	124454330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124451800_124454300
ES.29458.2	chr6	+	143	1	Intergenic	novelGene_24445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGTGTTATTTGTTG	NA	False	NA	13	True	NA	NA	NA	124451820	124451963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124451800_124452000
ES.29458.3	chr6	+	2354	2	Intergenic	novelGene_24446	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCCTCCTGTGTTTGA	NA	False	NA	NA	False	TTTAAA	-15	NA	124451825	124454331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124451845_124451996
ES.29459.1	chr6	+	2049	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	-45	1006	-45	-1006	multi-exon	TRUE	canonical	2	10	junction_3	3.13687742827162	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCATGTGTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	124470026	124486596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ES.29459.2	chr6	+	1190	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	8	1812	8	-1812	multi-exon	FALSE	canonical	2	10	junction_3	3.13687742827162	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCCTGTAGCTCCCA	NA	False	NA	NA	False	NA	NA	NA	124470079	124485790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ES.29459.3	chr6	+	2097	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	21	892	21	-892	multi-exon	FALSE	canonical	2	10	junction_3	3.13687742827162	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATGCCTCCTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	124470092	124486710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ES.29459.4	chr6	+	1948	2	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	14018	382	14018	-382	3prime_fragment	FALSE	canonical	3	17	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGAAAATGAATACCATA	3564	False	NA	NA	False	AATAAA	-19	NA	124484089	124487220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124484124_124485306
ES.2946.1	chr10	-	1736	2	ISM	ENSMUSG00000036923.13	ENSMUST00000133371.8	3510	4	61044	19	60717	-19	3prime_fragment	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACACAAGAAACATGAAAT	7290	False	NA	NA	False	NA	NA	NA	62500863	62494840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62495447_62499733
ES.2946.2	chr10	-	182	1	Intergenic	novelGene_2269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGGTATGGATAC	8093	False	NA	NA	False	NA	NA	NA	62495866	62495684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62495700_62495900
ES.29460.1	chr6	+	99	1	Genic_Genomic	ENSMUSG00000038527.10	novel	NA	NA	NA	NA	17436	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGTTGATTCTACTT	6982	False	NA	NA	False	NA	NA	NA	124487507	124487606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_124487500_124487600
ES.29461.1	chr6	+	160	1	Intergenic	novelGene_24447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	7395	False	NA	NA	False	NA	NA	NA	124500571	124500731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124500600_124500700
ES.29461.2	chr6	+	258	1	Intergenic	novelGene_24448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	7398	False	NA	NA	False	AAGAAA	-23	NA	124500574	124500832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124500600_124500800
ES.29462.1	chr6	-	2902	12	FSM	ENSMUSG00000038521.18	ENSMUST00000162443.8	2906	12	7	-3	7	0	multi-exon	FALSE	canonical	1	3	junction_4	4.09797369803078	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTCTGCTTTTTTTGGT	NA	False	NA	NA	False	AGTAAA	-17	NA	124519311	124507303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
ES.29462.2	chr6	-	2928	12	NIC	ENSMUSG00000038521.18	novel	2946	12	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	4.97431418920162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTCTGCTTTTTTTGG	NA	False	NA	NA	False	AGTAAA	-16	NA	124519258	124507304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519146
ES.29462.3	chr6	-	3757	12	NNC	ENSMUSG00000038521.18	novel	2906	12	NA	NA	-1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	4.88038746598893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTGCTGGTCTGCTTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	124519281	124507309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512574_124512627_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
ES.29463.1	chr6	-	2902	1	Intergenic	novelGene_24449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTGTCTTGGATCCA	NA	False	NA	NA	False	NA	NA	NA	124529980	124527078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124527100_124530000
ES.29464.1	chr6	-	3398	1	Intergenic	novelGene_24450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124570121	124566723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124566700_124570100
ES.29465.1	chr6	+	177	1	Intergenic	novelGene_24451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	124629597	124629774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124629600_124629800
ES.29466.1	chr6	+	2015	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	26	240	26	161	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGACTGCTTTCTTTC	NA	False	NA	41	True	GATAAA	-35	NA	124640015	124681141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.10	chr6	+	2979	11	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-48	152	intron_retention	FALSE	canonical	3	738	junction_2	62.9844425235312	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640086	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124678541_124679198_124679286_124679374_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.11	chr6	+	1924	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-48	149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	231.355951704055	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGCTAGCATCCCAGA	NA	False	NA	29	True	GATAAA	-23	NA	124640086	124681129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680465_124680591_124680762
ES.29466.12	chr6	+	3255	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-47	-12	intron_retention	FALSE	canonical	3	738	junction_2	63.6535763156932	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAACAACTATA	NA	False	NA	NA	False	AATAAA	-13	NA	124640087	124681369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680349_124680457_124680591_124680762
ES.29466.13	chr6	+	1883	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-45	153	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_12	237.606861923921	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAGCATCCCAGACTGC	NA	False	NA	33	True	GATAAA	-27	NA	124640089	124681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680812
ES.29466.14	chr6	+	2583	12	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-44	143	intron_retention	FALSE	canonical	3	738	junction_2	58.999369656249	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTCACTGCTAGCAT	NA	False	NA	23	True	GATAAA	-17	NA	124640090	124681123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.15	chr6	+	2160	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-44	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	231.355951704055	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAACAACTATA	NA	False	NA	NA	False	AATAAA	-13	NA	124640090	124681369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680465_124680591_124680762
ES.29466.16	chr6	+	1500	12	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	101	852	-44	-362	5prime_fragment	FALSE	canonical	3	738	junction_2	59.9046073643011	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAATGGTGCCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124640090	124680529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457
ES.29466.17	chr6	+	2130	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_12	237.606861923921	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124640090	124681381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680812
ES.29466.18	chr6	+	2029	12	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-43	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	247.54129799869	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAACAACTATA	NA	False	NA	NA	False	AATAAA	-13	NA	124640091	124681369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124677000_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.19	chr6	+	2068	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-43	152	intron_retention	FALSE	canonical	2	20	junction_2	264.743062022197	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640091	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680349_124680457
ES.29466.2	chr6	+	2222	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	59	0	59	0	multi-exon	FALSE	canonical	3	738	junction_2	58.4776785524946	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124640048	124681381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.20	chr6	+	3610	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-43	160	intron_retention	FALSE	canonical	3	738	junction_2	62.3801567056166	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCAGACTGCTTTCTTT	NA	False	NA	40	True	GATAAA	-34	NA	124640091	124681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.21	chr6	+	1642	11	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-42	151	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	333.168065696579	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTAGCATCCCAGACT	NA	False	NA	31	True	GATAAA	-25	NA	124640092	124681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124677242_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.22	chr6	+	2833	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-42	152	intron_retention	FALSE	canonical	2	20	junction_2	266.844524021011	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640092	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.26	chr6	+	1928	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-13	124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	239.291822653614	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCACTTCTGTTTGTTC	NA	False	NA	4	True	NA	NA	NA	124640121	124681104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678375_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.27	chr6	+	1859	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-12	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	239.291822653614	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640122	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677771_124678427_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.28	chr6	+	3568	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-12	152	intron_retention	FALSE	canonical	3	738	junction_2	64.1308461826192	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640122	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.29	chr6	+	1857	13	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-5	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	239.365596711158	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640129	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677023_124677197_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.3	chr6	+	2103	12	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	59	-12	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	241.916589682552	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAACAACTATA	NA	False	NA	NA	False	AATAAA	-13	NA	124640048	124681369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.30	chr6	+	6280	12	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	166	-3993	12	3993	intron_retention	FALSE	canonical	3	738	junction_2	59.9046073643011	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGCATCACTCCGCT	NA	False	NA	NA	False	AATAGA	-15	NA	124640155	124685374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457
ES.29466.31	chr6	+	1703	12	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-14	152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	320.148261108676	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640163	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124677000_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680362_124680487_124680591_124680762
ES.29466.32	chr6	+	3572	1	Intergenic	novelGene_24452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGTTGGTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	124655809	124659381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124655800_124659400
ES.29466.33	chr6	+	327	1	Intergenic	novelGene_24453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAATTTAAAAA	361	False	NA	NA	False	NA	NA	NA	124663561	124663888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124663600_124663900
ES.29466.4	chr6	+	2042	12	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	60	0	combination_of_known_splicesites	FALSE	canonical	2	39	junction_5	239.001642513115	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124640049	124681381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.5	chr6	+	2966	11	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-66	154	intron_retention	FALSE	canonical	3	738	junction_2	60.8510476491572	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGCATCCCAGACTGCT	NA	False	NA	34	True	GATAAA	-28	NA	124640068	124681134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.6	chr6	+	1845	12	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-65	152	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	241.916589682552	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640069	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.7	chr6	+	2985	11	NNC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-64	155	intron_retention	FALSE	canonical	0	0	junction_9	252.448489795443	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCATCCCAGACTGCTT	NA	False	NA	35	True	GATAAA	-29	NA	124640070	124681135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680437_124680591_124680762
ES.29466.8	chr6	+	3096	10	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	-55	1	intron_retention	FALSE	canonical	2	20	junction_2	266.844524021011	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACAGTGTTGTCTCC	NA	False	NA	NA	False	AATAAA	-26	NA	124640079	124681382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124640323_124675032_124675141_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ES.29466.9	chr6	+	2113	12	ISM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	91	249	-54	152	intron_retention	FALSE	canonical	3	738	junction_2	59.9046073643011	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAGCATCCCAGACTG	NA	False	NA	32	True	GATAAA	-26	NA	124640080	124681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457
ES.29467.1	chr6	-	2483	1	Antisense	novelGene_ENSMUSG00000004270.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGTGAGTGTATGT	NA	False	NA	NA	False	NA	NA	NA	124677987	124675504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_124675500_124678000
ES.29468.1	chr6	-	1057	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	-11	-12	-11	12	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTGTTTTGAGGGTT	NA	False	NA	-2	True	TATAAA	-31	NA	124689152	124681331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ES.29468.10	chr6	-	1555	3	FSM	ENSMUSG00000004268.12	ENSMUST00000141251.2	1074	3	90	-571	6	1	multi-exon	FALSE	canonical	3	1245	junction_2	29.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTCAGACCTGATTG	NA	False	NA	-13	True	TATAAA	-20	NA	124689014	124681342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124682620_124682703_124682806_124688838
ES.29468.12	chr6	-	919	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	600.666712911578	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689128	124681343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124688838
ES.29468.13	chr6	-	1105	5	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	103	junction_2	555.767487354199	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689148	124681343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124681622_124681901_124682175_124682477_124682620_124682703_124682806_124688838
ES.29468.14	chr6	-	1187	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	1245	junction_4	30.9273341883842	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689014	124681343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ES.29468.15	chr6	-	750	4	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	668.423185979927	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689102	124681344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124681622_124681901_124682052_124682120_124682180_124688838
ES.29468.19	chr6	-	2654	2	ISM	ENSMUSG00000004268.12	ENSMUST00000141251.2	1074	3	5021	-568	1293	-1	3prime_fragment	FALSE	canonical	3	1304	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTTTCAGACCTGA	NA	False	NA	-16	True	TATAAA	-17	NA	124684083	124681345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124682620_124682703
ES.29468.2	chr6	-	1365	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-21	12	intron_retention	FALSE	canonical	3	1245	junction_4	117.50957407803	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTGTTTTGAGGGTT	NA	False	NA	-2	True	TATAAA	-31	NA	124689162	124681331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688838
ES.29468.20	chr6	-	1332	4	NNC	ENSMUSG00000004268.12	novel	917	5	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_3	618.51722332976	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTTTTCAGACCTG	NA	False	NA	-17	True	TATAAA	-16	NA	124689128	124681346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124682180_124682477_124682620_124682703_124682771_124688838
ES.29468.4	chr6	-	1062	6	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-5	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	550.287343121755	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGATTGTTTTGAGGG	NA	False	NA	-4	True	TATAAA	-29	NA	124689146	124681333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682802_124688821
ES.29468.5	chr6	-	1434	4	NIC	ENSMUSG00000004268.12	novel	917	5	NA	NA	-41	10	intron_retention	FALSE	canonical	3	1245	junction_3	32.2524762184584	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGATTGTTTTGAGGG	NA	False	NA	-4	True	TATAAA	-29	NA	124689182	124681333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124682180_124682477_124682620_124682703_124682806_124688838
ES.29468.6	chr6	-	1316	5	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	2	10	intron_retention	FALSE	canonical	3	12	junction_4	595.788710450274	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGATTGTTTTGAGGG	NA	False	NA	-4	True	TATAAA	-29	NA	124689102	124681333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688825
ES.29468.7	chr6	-	763	5	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	625.466226106574	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACCTGATTGTTTTGA	NA	False	NA	-7	True	TATAAA	-26	NA	124689014	124681336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124681622_124682120_124682180_124682477_124682620_124682703_124682802_124688835
ES.29468.9	chr6	-	1036	6	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	539.261569185122	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTCAGACCTGATTG	NA	False	NA	-13	True	TATAAA	-20	NA	124689117	124681342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688813
ES.29469.1	chr6	+	1404	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-91	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	902.100985200659	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTCTGAGTGT	NA	False	NA	20	True	AATAAA	-21	NA	124689207	124693909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.14	chr6	+	1763	8	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-39	-11	intron_retention	FALSE	non_canonical	0	0	junction_7	961.445701396961	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAAAATTTTGTGTC	NA	False	NA	13	True	AATAAA	-14	NA	124689259	124693902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692623_124692916_124692999_124693568
ES.29469.15	chr6	+	3034	7	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-38	0	intron_retention	FALSE	canonical	3	1887	junction_6	305.420293293611	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124689260	124693913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124689527_124689666_124689752_124690024_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693387
ES.29469.18	chr6	+	1453	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	902.100985200659	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAATTTTGTGTCTGAG	NA	False	NA	17	True	AATAAA	-18	NA	124689262	124693906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124693106_124693568
ES.29469.2	chr6	+	1384	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-80	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1158.81075218303	784	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689218	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690954_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.20	chr6	+	1421	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-33	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1173.66456025561	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689265	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691208_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.21	chr6	+	1463	10	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1267.80755637439	784	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689268	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690401_124690523_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.23	chr6	+	1600	8	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-21	-11	intron_retention	FALSE	non_canonical	0	0	junction_7	956.570639187249	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAAAATTTTGTGTC	NA	False	NA	13	True	AATAAA	-14	NA	124689277	124693902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.25	chr6	+	3203	5	NNC	ENSMUSG00000004264.18	novel	2373	8	NA	NA	-15	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	1132.2026099599	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689283	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.26	chr6	+	3673	5	NIC	ENSMUSG00000004264.18	novel	2373	8	NA	NA	-15	-5	intron_retention	FALSE	canonical	3	2558	junction_3	108.921990433521	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689283	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124689527_124689666_124691923_124692022_124692127_124692544_124692623_124692916
ES.29469.29	chr6	+	1445	8	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_7	956.204081197084	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689300	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ES.29469.3	chr6	+	1387	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-71	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1187.58568111947	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689227	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692135_124692548_124692623_124692916_124692999_124693568
ES.29469.30	chr6	+	2812	7	NNC	ENSMUSG00000004264.18	novel	2373	8	NA	NA	3	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	999.38954978638	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689301	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.36	chr6	+	2638	4	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	398	-5	intron_retention	FALSE	canonical	3	1887	junction_3	405.117541242319	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124690482	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124691923_124692022_124692623_124692916_124692994_124693387
ES.29469.37	chr6	+	3248	2	ISM	ENSMUSG00000004264.18	ENSMUST00000145447.8	2373	8	1267	0	481	0	intron_retention	FALSE	canonical	3	2842	junction_1	0	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124690565	124693913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124691923_124692022
ES.29469.5	chr6	+	1369	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-63	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1180.04724481692	784	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689235	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689521_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.7	chr6	+	1363	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-61	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1187.58568111947	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAAAATTTTGTGTC	NA	False	NA	13	True	AATAAA	-14	NA	124689237	124693902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692118_124692539_124692623_124692916_124692999_124693568
ES.29469.8	chr6	+	2034	8	NNC	ENSMUSG00000004264.18	novel	2373	8	NA	NA	-61	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	952.068703574763	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTGTCTGAGTG	NA	False	NA	19	True	AATAAA	-20	NA	124689237	124693908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691923_124692022_124692127_124692544_124692623_124692916_124692999_124693568
ES.29469.9	chr6	+	1366	9	NNC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	-61	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1187.58568111947	784	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATTTTGTGTCTGAGT	NA	False	NA	18	True	AATAAA	-19	NA	124689237	124693907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692128_124692551_124692623_124692916_124692999_124693568
ES.2947.1	chr10	-	272	2	Genic_Genomic	ENSMUSG00000112806.2	novel	1431	1	NA	NA	947	113631	multi-exon	FALSE	non_canonical	0	0	junction_1	0	649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTACAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	62618019	62503904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62503982_62617824
ES.2947.102	chr10	-	2403	14	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	369	-89	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	138.311585467582	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGCATTGCAAAACCT	NA	False	NA	-26	True	ATTAAA	-17	NA	62602534	62580329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62602335
ES.2947.104	chr10	-	3788	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-79	153	-79	-153	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCTTTTGAAAATTGCC	NA	False	NA	-90	True	TATAAA	-45	NA	62628144	62580393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.105	chr10	-	5288	23	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-156	intron_retention	FALSE	canonical	3	60	junction_22	76.4920592216404	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTGCTTTTGAAAATT	NA	False	NA	-93	True	TATAAA	-42	NA	62628029	62580396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.106	chr10	-	4114	19	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	108	-2933	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	79.8610869565181	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTGTTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	62627900	62585996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699
ES.2947.107	chr10	-	2612	18	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-20	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.722521183688	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGAGATGAGAGAAA	NA	False	NA	-21	True	GATAAA	-10	NA	62628043	62588973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.108	chr10	-	8702	14	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-41	6	intron_retention	FALSE	canonical	3	241	junction_13	49.1771342449352	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAGAAGATGATAT	NA	False	NA	-93	True	GATAAA	-4	NA	62628106	62589045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.109	chr10	-	2413	11	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	992	intron_retention	FALSE	canonical	3	241	junction_10	53.694413117195	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACAGATATCAGAGGTA	NA	False	NA	NA	False	AATGAA	-16	NA	62628035	62601347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.11	chr10	-	4237	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_11	80.1914297567216	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628117	62579706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.110	chr10	-	2282	11	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	855	intron_retention	FALSE	canonical	3	34	junction_10	102.321258788191	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTTACTCATAGCT	NA	False	NA	NA	False	AGTAAA	-21	NA	62628035	62601484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.111	chr10	-	1785	12	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	18	21246	2	853	5prime_fragment	FALSE	canonical	3	241	junction_11	54.5884678887975	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTTACTCATAG	NA	False	NA	NA	False	AGTAAA	-19	NA	62628047	62601486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.112	chr10	-	2998	10	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	31	24593	1	754	5prime_fragment	FALSE	canonical	3	241	junction_9	56.5883991077698	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTAGTATTTGCTACTT	NA	False	NA	NA	False	AATAAA	-45	NA	62628034	62604833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.113	chr10	-	3974	9	FSM	ENSMUSG00000020074.8	ENSMUST00000217940.2	3178	9	-70	-726	-54	726	multi-exon	FALSE	canonical	3	241	junction_8	57.085325391032	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	62628119	62604861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.114	chr10	-	2249	10	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	30	25343	0	4	5prime_fragment	FALSE	canonical	3	241	junction_9	56.5883991077698	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACAAATGTGTGGAACA	NA	False	NA	NA	False	AAAAAG	-4	NA	62628035	62605583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.115	chr10	-	1403	11	NNC	ENSMUSG00000020074.8	novel	3178	9	NA	NA	1	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.713183461963	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGCTAATTTATAGAA	NA	False	NA	NA	False	NA	NA	NA	62628034	62605893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62606025_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627920
ES.2947.116	chr10	-	178	1	ISM	ENSMUSG00000020074.8	ENSMUST00000217940.2	3178	9	20710	1574	416	-1403	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCAAAACT	9075	False	NA	NA	False	NA	NA	NA	62607339	62607161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62607200_62607300
ES.2947.117	chr10	-	668	5	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	2	-1529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.976706389465	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAAGGCTGCCTATAAC	NA	False	NA	NA	False	NA	NA	NA	62628033	62617773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62618072_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.118	chr10	-	654	6	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-2	-1599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	171.080565816226	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	62628059	62617843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62618072_62619012_62619046_62619664_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.12	chr10	-	4293	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	121.565512844077	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628062	62579706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.120	chr10	-	7898	1	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	147	-3719	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCATGTGGGAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	62627861	62619963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62620000_62627900
ES.2947.121	chr10	-	171	1	Intergenic	novelGene_2278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATAAATAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	62637404	62637233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62637200_62637400
ES.2947.122	chr10	-	171	1	Intergenic	novelGene_2279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCACAGTGAGCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	62637815	62637644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62637600_62637800
ES.2947.123	chr10	-	223	1	Intergenic	novelGene_2280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTCTCCACCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	62639203	62638980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62639000_62639200
ES.2947.124	chr10	-	14399	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-38	6	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	65.4571530765652	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTATTTTTTTCTTCTTC	2765	False	NA	7	True	AATAAA	-27	NA	62723329	62640342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62723191
ES.2947.125	chr10	-	14414	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	54.9749311555327	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	2931	False	NA	1	True	AATAAA	-21	NA	62723163	62640348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.126	chr10	-	14422	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	125	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	59.2754282050234	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTAGTCTATTTTTTTC	NA	False	NA	1	True	AATAAA	-21	NA	62728640	62640348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.127	chr10	-	12744	12	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	1333	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	66.029294775842	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTAGTCTATTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	62714460	62640349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669404_62673954_62676158_62700586_62700641_62713930
ES.2947.129	chr10	-	14477	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTAGTCTATTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	62728750	62640349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.13	chr10	-	4430	24	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	120.765657557803	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628028	62579706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619643_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.132	chr10	-	6991	2	NNC	ENSMUSG00000047146.18	novel	13986	11	NA	NA	6835	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGTAGTCTATTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	62694248	62640350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62647315_62694221
ES.2947.134	chr10	-	12020	10	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-57	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	55.3232922616385	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGTAGTCTATTTTT	2934	False	NA	-2	True	AATAAA	-18	NA	62723160	62640351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62700586_62700641_62713930_62715913_62722950
ES.2947.135	chr10	-	12650	11	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-3626	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	44.4869643828392	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCTGGTAGTCTATTTT	NA	False	NA	-3	True	AATAAA	-17	NA	62738523	62640352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62713930_62715913_62737813
ES.2947.136	chr10	-	14286	13	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-76	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	63.2183166143765	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCTGGTAGTCTATTTT	2915	False	NA	-3	True	AATAAA	-17	NA	62723179	62640352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62723090
ES.2947.137	chr10	-	10517	9	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-24031	0	intron_retention	FALSE	canonical	3	87	junction_2	16.9406131825268	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	NA	False	NA	-6	True	AATAAA	-14	NA	62674351	62640355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954
ES.2947.138	chr10	-	12370	12	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	70.3178145374436	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	NA	False	NA	-6	True	AATAAA	-14	NA	62728639	62640355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62673954_62676158_62700586_62700641_62701261_62701345_62728473
ES.2947.139	chr10	-	11344	9	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-25061	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	40.2336923485777	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCACCTGGTAGTCTA	NA	False	NA	-7	True	AATAAA	-13	NA	62675381	62640356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62673954
ES.2947.14	chr10	-	4459	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-107	0	-52	0	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628117	62579706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ES.2947.141	chr10	-	3443	2	NNC	ENSMUSG00000047146.18	novel	13986	11	NA	NA	6408	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGCACCTGGTAGTC	7304	False	NA	-9	True	AATAAA	-11	NA	62643910	62640358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62641435_62641543
ES.2947.142	chr10	-	11470	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	138	-2878	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATTTCTCTGCCTTCCT	NA	False	NA	NA	False	AATATA	-18	NA	62728627	62643233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.143	chr10	-	8082	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	0	1815	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	63.0583393903349	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGTATGTGAATGTGGT	8586	False	NA	NA	False	TATAAA	-20	NA	62744775	62646585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62744657
ES.2947.144	chr10	-	8139	13	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-21	1815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	64.839706199211	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGTATGTGAATGTGGT	2970	False	NA	NA	False	TATAAA	-20	NA	62723124	62646585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654716_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.145	chr10	-	7255	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	138	952	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTTCCCTCTTTAACT	NA	False	NA	NA	False	AATACA	-15	NA	62728627	62647448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.146	chr10	-	3207	10	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-24014	863	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	28.3095760965337	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTCAAATAACACACGG	NA	False	NA	NA	False	NA	NA	NA	62674334	62647537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954
ES.2947.147	chr10	-	5097	12	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	211	849	combination_of_known_splicesites	FALSE	canonical	3	8	junction_11	56.4202062156945	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAACCTCAGCCTGTACT	NA	False	NA	NA	False	NA	NA	NA	62728554	62647551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62728473
ES.2947.148	chr10	-	6686	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	120	365	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGGTTAGGTGTTGGC	NA	False	NA	7	True	AATAAA	-30	NA	62728645	62648035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.149	chr10	-	6769	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	85	364	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	54.9749311555327	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTGGTTAGGTGTTGG	2888	False	NA	6	True	AATAAA	-29	NA	62723206	62648036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.150	chr10	-	6734	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	122	361	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	59.2754282050234	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATCTTGGTTAGGTGT	NA	False	NA	3	True	AATAAA	-26	NA	62728643	62648039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.151	chr10	-	6802	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-90	356	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	60.0166643524946	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAACATCTTGGTTA	2901	False	NA	-2	True	AATAAA	-21	NA	62723193	62648044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.152	chr10	-	6603	13	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	2333	355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	63.2183166143765	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGAACATCTTGGTT	NA	False	NA	-3	True	AATAAA	-20	NA	62732564	62648045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62732465
ES.2947.153	chr10	-	6686	13	FSM	ENSMUSG00000047146.18	ENSMUST00000174189.2	14369	13	-8	7691	-8	354	multi-exon	FALSE	canonical	0	0	junction_12	63.2183166143765	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAGGAACATCTTGGT	NA	False	NA	-4	True	AATAAA	-19	NA	62734905	62648046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62734722
ES.2947.154	chr10	-	7081	14	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	2378	353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.5060392328236	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAAAGGAACATCTTGG	NA	False	NA	-5	True	AATAAA	-18	NA	62732519	62648047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62721317_62721843_62732465
ES.2947.155	chr10	-	7089	13	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-19	350	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	46.1185067696979	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTAAAGGAACATCT	2784	False	NA	-8	True	AATAAA	-15	NA	62723310	62648050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62713930_62715913_62721317_62721843_62723191
ES.2947.156	chr10	-	6816	12	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	140	350	intron_retention	FALSE	canonical	3	87	junction_2	54.0425299308083	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTAAAGGAACATCT	NA	False	NA	-8	True	AATAAA	-15	NA	62728625	62648050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.157	chr10	-	5283	12	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	1099	350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.1206128263243	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTAAAGGAACATCT	NA	False	NA	-8	True	AATAAA	-15	NA	62714694	62648050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652160_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930
ES.2947.158	chr10	-	4601	12	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	140	282	combination_of_known_splicesites	FALSE	canonical	3	8	junction_11	56.4202062156945	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATTACATTTTGAGAA	NA	False	NA	-76	True	ATTAAA	-25	NA	62728625	62648118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62728473
ES.2947.159	chr10	-	6774	14	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	2574	270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	68.2319399778146	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATACTTAACTGTGATT	NA	False	NA	-88	True	ATTAAA	-13	NA	62742201	62648130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62737813_62738056_62742088
ES.2947.16	chr10	-	6797	17	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-4736	-2	intron_retention	FALSE	canonical	0	0	junction_10	124.526462423655	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	3923	False	NA	-2	True	ATTAAA	-16	NA	62612491	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62599303_62600102_62600314_62601045_62601213_62601720_62601870_62602335_62602562_62606633_62606796_62607714_62607845_62612346
ES.2947.160	chr10	-	6491	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	28	270	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	61.2033836210603	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATACTTAACTGTGATT	2831	False	NA	-88	True	ATTAAA	-13	NA	62723263	62648130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62723191
ES.2947.161	chr10	-	6595	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-60	255	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	65.2116213228559	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGTGAA	2931	False	NA	-103	True	NA	NA	NA	62723163	62648145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649582_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.162	chr10	-	6627	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	69	255	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGTGAA	NA	False	NA	-103	True	NA	NA	NA	62728696	62648145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.163	chr10	-	4296	10	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	25052	255	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	28.3095760965337	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGTGAA	NA	False	NA	-103	True	NA	NA	NA	62676031	62648145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954
ES.2947.165	chr10	-	6688	13	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-52	255	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	72.902284295868	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGGTGAA	2751	False	NA	-103	True	NA	NA	NA	62723343	62648145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62649192_62649302_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658249_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62723191
ES.2947.166	chr10	-	4208	12	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-8	-67	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	56.4202062156945	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCAGACCGGGAGTGTC	2795	False	NA	18	True	AAAAAG	-14	NA	62723299	62648467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62723191
ES.2947.167	chr10	-	5423	7	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-57	-8763	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	54.7174560812178	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTGAGGCCCTATT	NA	False	NA	NA	False	GATAAA	-6	NA	62728822	62657889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.168	chr10	-	5287	7	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-60	-8763	combination_of_known_junctions	FALSE	canonical	3	63	junction_6	67.5584109411174	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTGAGGCCCTATT	2931	False	NA	NA	False	GATAAA	-6	NA	62723163	62657889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.169	chr10	-	5852	8	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	88	-8763	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	87.533550419137	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTGAGGCCCTATT	2891	False	NA	NA	False	GATAAA	-6	NA	62723203	62657889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62721317_62721843_62722950
ES.2947.170	chr10	-	5435	8	NNC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	27	-8771	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.9081173826139	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTCTGCTTGAG	NA	False	NA	NA	False	NA	NA	NA	62728738	62657897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62716895_62717000_62728473
ES.2947.171	chr10	-	5204	7	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-38	-8771	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	79.984199828605	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTCTGCTTGAG	2765	False	NA	NA	False	NA	NA	NA	62723329	62657897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62723191
ES.2947.172	chr10	-	4927	1	Intergenic	novelGene_2281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAGAAAGAAA	1786	False	NA	NA	False	NA	NA	NA	62663594	62658667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62658700_62663600
ES.2947.173	chr10	-	5149	3	Intergenic	novelGene_2282	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62665910	62658690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62662094_62662326_62663970_62665807
ES.2947.174	chr10	-	3932	4	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	0	322	combination_of_known_junctions	FALSE	canonical	3	182	junction_3	31.4572019664107	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGACTCAGAGTAAAACAC	NA	False	NA	NA	False	ATTAAA	-4	NA	62728765	62674553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.175	chr10	-	3864	4	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	-71	322	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	85.1873751731375	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGACTCAGAGTAAAACAC	2920	False	NA	NA	False	ATTAAA	-4	NA	62723174	62674553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62676158_62700586_62700641_62713930_62715913_62722950
ES.2947.176	chr10	-	4515	2	Genic_Genomic	ENSMUSG00000112309.2	novel	1871	1	NA	NA	-3270	-351	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGGGAGAGAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62699043	62694253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62698546_62698820
ES.2947.177	chr10	-	4330	2	Genic_Genomic	ENSMUSG00000112309.2	novel	1871	1	NA	NA	-9052	-1804	multi-exon	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCCAACCAGGATAATG	NA	False	NA	NA	False	NA	NA	NA	62704825	62695706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62698544_62703332
ES.2947.178	chr10	-	3089	3	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	143	15969	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	20.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTGTGGCAGATGCCG	NA	False	NA	NA	False	AATAAA	-20	NA	62728622	62699682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62700641_62713930_62715913_62728473
ES.2947.179	chr10	-	6182	2	FSM	ENSMUSG00000047146.18	ENSMUST00000227494.2	553	2	129	-5758	129	5758	multi-exon	FALSE	canonical	3	182	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	62728636	62709893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62715913_62728473
ES.2947.18	chr10	-	6907	21	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	241	junction_20	51.6202237499994	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628037	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.180	chr10	-	6317	2	FSM	ENSMUSG00000047146.18	ENSMUST00000218438.2	414	2	-145	-5758	43	5758	multi-exon	FALSE	canonical	3	63	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTTTGTTTTGTTTT	2846	False	NA	NA	False	NA	NA	NA	62723248	62709893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62715913_62722950
ES.2947.181	chr10	-	8377	1	Genic_Genomic	ENSMUSG00000047146.18	novel	NA	NA	NA	NA	-1087	-350	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTCTAGTTATTA	1716	False	NA	NA	False	NA	NA	NA	62724378	62716001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62716000_62724400
ES.2947.182	chr10	-	3048	1	Intergenic	novelGene_2287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAGAAGGGGAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	62733549	62730501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62730500_62733500
ES.2947.183	chr10	-	179	1	Intergenic	novelGene_2289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAACCTA	NA	False	NA	NA	False	NA	NA	NA	62737220	62737041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62737000_62737200
ES.2947.19	chr10	-	10185	21	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_11	92.4517576901597	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628043	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.2	chr10	-	168	1	Intergenic	novelGene_2271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	62527939	62527771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62527800_62527900
ES.2947.22	chr10	-	4376	25	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.286392073673	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628041	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583116_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.23	chr10	-	4692	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_10	102.616580389762	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628034	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.25	chr10	-	4164	24	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-190	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_23	103.099324437325	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628255	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62628203
ES.2947.26	chr10	-	4153	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	34	junction_23	99.8087964119888	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628029	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.27	chr10	-	4195	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	110.123371269731	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62628052	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.3	chr10	-	176	1	Intergenic	novelGene_2272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGAATATATCT	8527	False	NA	NA	False	NA	NA	NA	62545092	62544916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62544900_62545100
ES.2947.30	chr10	-	4478	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	332	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.624145047579	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTAGTTCCTTCAG	NA	False	NA	-2	True	ATTAAA	-16	NA	62627676	62579708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627521
ES.2947.31	chr10	-	9055	22	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	-3	intron_retention	FALSE	canonical	3	241	junction_21	52.2616823945806	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGTAGTTCCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	62628035	62579709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.32	chr10	-	4367	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	103.452879437398	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGTAGTTCCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	62628033	62579709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.35	chr10	-	4388	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	105.381837131558	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTGTAGTTCCTTCA	NA	False	NA	-3	True	ATTAAA	-15	NA	62627986	62579709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627920
ES.2947.37	chr10	-	4617	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	362	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	107.119473473418	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCTGTGTAGTTCCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	62627646	62579710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627350
ES.2947.39	chr10	-	4409	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-52	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	109.583763095705	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAATCTGTGTAGTTCCT	NA	False	NA	-6	True	ATTAAA	-12	NA	62628117	62579712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.4	chr10	-	180	1	Intergenic	novelGene_2273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAGAATTGTTAAC	247	False	NA	NA	False	NA	NA	NA	62553372	62553192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62553200_62553400
ES.2947.41	chr10	-	3966	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	6	-110	-2	110	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATTTGCAACTTTTTG	NA	False	NA	NA	False	TATAAA	-20	NA	62628059	62580130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.43	chr10	-	3992	25	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-40	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	100.456449588311	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTATTGAAGTATCC	NA	False	NA	5	True	AATAAA	-39	NA	62628105	62580236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.44	chr10	-	3925	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-63	0	-63	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628128	62580240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.45	chr10	-	3911	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	99.9008883844383	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGTCTTTTATTGAAG	NA	False	NA	0	True	AATAAA	-34	NA	62628062	62580241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600060_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ES.2947.46	chr10	-	2401	14	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-445	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	137.78978071192	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAATGTCTTTTATTGA	897	False	NA	-2	True	AATAAA	-32	NA	62601418	62580243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601307
ES.2947.47	chr10	-	5155	22	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_17	90.3090687093852	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAATGTCTTTTATTGA	NA	False	NA	-2	True	AATAAA	-32	NA	62628023	62580243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.48	chr10	-	3809	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.624145047579	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAATGTCTTTTATTGA	NA	False	NA	-2	True	AATAAA	-32	NA	62628107	62580243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62628086
ES.2947.49	chr10	-	5385	23	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	241	junction_22	51.09414418745	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTAATGTCTTTTATTGA	NA	False	NA	-2	True	AATAAA	-32	NA	62628059	62580243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.51	chr10	-	3674	25	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	85.6392222576133	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTAATGTCTTTTATTG	NA	False	NA	-3	True	AATAAA	-31	NA	62628043	62580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600264_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.53	chr10	-	5187	22	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-5	intron_retention	FALSE	canonical	2	9	junction_9	109.10877885662	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628043	62580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.55	chr10	-	5317	23	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	2	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	112.551365684097	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628033	62580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582828_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588954_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.57	chr10	-	3527	24	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	123.44924643806	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628032	62580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602454_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626844_62627994
ES.2947.58	chr10	-	3478	22	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	114.376115039854	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628034	62580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.59	chr10	-	3862	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	-49	539	-2	-5	multi-exon	FALSE	canonical	0	0	junction_11	99.9008883844383	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTAATGTCTTTTATT	NA	False	NA	-4	True	AATAAA	-30	NA	62628059	62580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ES.2947.6	chr10	-	6016	23	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-1	95	intron_retention	TRUE	canonical	3	241	junction_22	51.09414418745	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTATTTATTTAT	NA	False	NA	95	True	NA	NA	NA	62628058	62579611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.61	chr10	-	4038	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	407	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	125.409655119621	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTAATGTCTTTTAT	NA	False	NA	-5	True	AATAAA	-29	NA	62627601	62580246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607847_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627350
ES.2947.62	chr10	-	3927	25	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	105.381837131558	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTAATGTCTTTTAT	NA	False	NA	-5	True	AATAAA	-29	NA	62628062	62580246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627920
ES.2947.63	chr10	-	3688	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-19	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	110.123371269731	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTACTAATGTCTTTTA	NA	False	NA	-6	True	AATAAA	-28	NA	62628084	62580247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.65	chr10	-	3833	25	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	5	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	108.213138450621	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTACTAATGTCTTTTA	NA	False	NA	-6	True	AATAAA	-28	NA	62628044	62580247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581242_62582674_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.68	chr10	-	3792	24	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	127.324585585495	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTACTAATGTCTTT	NA	False	NA	-8	True	AATAAA	-26	NA	62628035	62580249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607847_62612346_62612540_62612627_62612743_62616219_62616414_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.69	chr10	-	3512	24	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	105.275998769065	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTACTAATGTCTTT	NA	False	NA	-8	True	AATAAA	-26	NA	62628043	62580249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602454_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.7	chr10	-	4131	24	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	6	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	105.429520263118	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTGGTGGATTCTTTT	NA	False	NA	17	True	ATTAAA	-35	NA	62628043	62579689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606747_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.70	chr10	-	4119	23	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	1	-9	intron_retention	FALSE	canonical	3	44	junction_11	81.6931873506239	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTACTAATGTCTTT	NA	False	NA	-8	True	AATAAA	-26	NA	62628034	62580249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.71	chr10	-	3327	22	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	129.965039778495	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATTACTAATGTCTTT	NA	False	NA	-8	True	AATAAA	-26	NA	62628035	62580249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
ES.2947.72	chr10	-	4910	11	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	25758	10	596	-10	intron_retention	FALSE	canonical	3	330	junction_9	40.1223129941433	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAATTACTAATGTCTT	8	True	NA	-9	True	AATAAA	-25	NA	62602307	62580250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218
ES.2947.76	chr10	-	3681	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-41	-11	combination_of_known_splicesites	FALSE	canonical	3	44	junction_11	80.1914297567216	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTAATTACTAATGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	62628106	62580251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.79	chr10	-	3783	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	39	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.406671607423	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGTAATTACTAATGTC	NA	False	NA	-11	True	AATAAA	-23	NA	62627969	62580252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616369_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627920
ES.2947.8	chr10	-	4485	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	-75	-548	-75	14	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTTGGTGGATTCT	NA	False	NA	14	True	ATTAAA	-32	NA	62628140	62579692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.80	chr10	-	6334	17	Fusion	ENSMUSG00000047146.18_ENSMUSG00000020074.8	novel	4352	25	NA	NA	131	-13	multi-exon	FALSE	canonical	0	0	junction_7	136.831100265985	1100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGTAATTACTAATGT	NA	False	NA	-12	True	AATAAA	-22	NA	62728634	62580253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
ES.2947.81	chr10	-	5455	24	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	1	-13	intron_retention	FALSE	canonical	0	0	junction_14	110.790440648688	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGTAATTACTAATGT	NA	False	NA	-12	True	AATAAA	-22	NA	62628034	62580253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607009_62607115_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.85	chr10	-	3853	25	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	107.666078107266	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGTAATTACTAATGT	NA	False	NA	-12	True	AATAAA	-22	NA	62628034	62580253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601870_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.86	chr10	-	3852	25	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.822739046806	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGTAATTACTAATGT	NA	False	NA	-12	True	AATAAA	-22	NA	62628055	62580253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621381_62626693_62626822_62627994
ES.2947.88	chr10	-	5359	23	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	3	-13	intron_retention	FALSE	canonical	3	65	junction_22	75.6527517211053	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGTAATTACTAATGT	NA	False	NA	-12	True	AATAAA	-22	NA	62628032	62580253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ES.2947.89	chr10	-	4573	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	-2	-15	intron_retention	FALSE	canonical	0	0	junction_11	87.3882975904989	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAGTAATTACTAAT	NA	False	NA	-14	True	AATAAA	-20	NA	62628059	62580255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.9	chr10	-	4469	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	100.456449588311	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTTCCTTCAGAATC	NA	False	NA	2	True	ATTAAA	-20	NA	62628050	62579704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
ES.2947.92	chr10	-	3238	21	NNC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	92.4458760572909	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAGTAATTACTAAT	NA	False	NA	-14	True	AATAAA	-20	NA	62628055	62580255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62602358_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.2947.93	chr10	-	3842	25	NNC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-204	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.493707430168	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAGTAATTACTAAT	NA	False	NA	-14	True	AATAAA	-20	NA	62628269	62580255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62628203
ES.2947.94	chr10	-	5365	13	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	-874	-16	intron_retention	FALSE	canonical	3	306	junction_11	41.7721165638303	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGACAAGTAATTACTAA	NA	False	NA	-15	True	AATAAA	-19	NA	62603777	62580256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335
ES.2947.97	chr10	-	3630	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	5	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	110.461054731866	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATGACAAGTAATTACTA	NA	False	NA	-16	True	AATAAA	-18	NA	62628044	62580257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ES.29470.1	chr6	-	2267	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	-51	3	-51	-3	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGTCTGTGCCCCTTGT	8679	False	NA	-3	True	AATAAA	-25	NA	124710168	124697672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ES.29470.11	chr6	-	2049	16	NNC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	40.7565127719894	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTGCCTCCAAGTCT	8772	False	NA	-14	True	AATAAA	-14	NA	124710075	124697683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705857_124705934_124709262_124709458_124709700_124709824_124709908
ES.29470.2	chr6	-	2375	15	NIC	ENSMUSG00000004266.16	novel	2219	16	NA	NA	5	3	intron_retention	FALSE	canonical	3	99	junction_9	22.8728740508695	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	8735	False	NA	-10	True	AATAAA	-18	NA	124710112	124697679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ES.29470.4	chr6	-	1260	2	ISM	ENSMUSG00000004266.16	ENSMUST00000004377.15	2308	15	16296	10	-487	3	intron_retention	FALSE	canonical	3	147	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCCTCCAAGTCTGTGC	9762	False	NA	-10	True	AATAAA	-18	NA	124699292	124697679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124698186_124698538
ES.29470.7	chr6	-	2196	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	18	12	18	1	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCCTCCAAGTCTGT	8938	False	NA	-12	True	AATAAA	-16	NA	124715659	124697681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ES.29470.8	chr6	-	2265	15	NIC	ENSMUSG00000004266.16	novel	2226	16	NA	NA	44	1	intron_retention	FALSE	canonical	3	18	junction_14	38.149544625094	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCCTCCAAGTCTGT	8964	False	NA	-12	True	AATAAA	-16	NA	124715633	124697681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124697872_124698042_124698186_124698538_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ES.29471.1	chr6	-	772	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	88	3	88	0	multi-exon	FALSE	canonical	3	807	junction_1	71.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9031	False	NA	NA	False	AATAAA	-14	NA	124718249	124716148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124716377_124717481_124717659_124717882
ES.29471.2	chr6	-	1636	2	FSM	ENSMUSG00000072772.4	ENSMUST00000140423.2	1656	2	20	0	20	0	multi-exon	FALSE	canonical	3	950	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9272	False	NA	NA	False	AATAAA	-14	NA	124718008	124716148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124717659_124717882
ES.29471.3	chr6	-	1858	1	NIC	ENSMUSG00000072772.4	novel	863	3	NA	NA	22	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGTGTCAGTCATT	9274	False	NA	NA	False	AATAAA	-14	NA	124718006	124716148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124716100_124718000
ES.29472.1	chr6	-	4887	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	-454	0	-454	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	8761	False	NA	0	True	AAAACA	-21	NA	124733941	124719506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
ES.29472.10	chr6	-	4066	9	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-426	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	31.003780011476	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	8789	False	NA	-2	True	AAAACA	-19	NA	124733913	124719508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726491_124733802
ES.29472.11	chr6	-	3740	11	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	38.0625800491769	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	9686	False	NA	-2	True	AAAACA	-19	NA	124733016	124719508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724307_124724832_124724950_124726198_124726310_124726424_124726563_124726709_124726885_124732946
ES.29472.15	chr6	-	4274	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	32.0928437082779	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATATGTCTGTGACGTGT	9661	False	NA	-4	True	AAAACA	-17	NA	124733041	124719510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724932_124726198_124726313_124726424_124726563_124726709_124726885_124732946
ES.29472.16	chr6	-	4280	11	NNC	ENSMUSG00000107478.2	novel	4359	13	NA	NA	11	-3359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.1988950107597	114	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATATGTCTGTGACGTGT	9729	False	NA	-4	True	AAAACA	-17	NA	124732973	124719510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124730579_124730636_124732946
ES.29472.17	chr6	-	4329	9	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-39	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	32.8024389337135	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATATGTCTGTGACGTG	9176	False	NA	-5	True	AAAACA	-45	NA	124733526	124719511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726709_124726885_124733258
ES.29472.19	chr6	-	4323	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	80	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.8599722729308	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCACAGTTCCCCAGGA	9765	False	NA	-21	True	TTTAAA	-34	NA	124732937	124719527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124732794
ES.29472.2	chr6	-	4334	11	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	29.6924232759807	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9239	False	NA	0	True	AAAACA	-21	NA	124733463	124719506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724758_124724832_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
ES.29472.21	chr6	-	1456	4	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	11013	223	114	-223	3prime_fragment	FALSE	canonical	3	86	junction_2	5.73488351136175	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCATTGGTGTGATTTTT	9935	False	NA	NA	False	NA	NA	NA	124722474	124719729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682
ES.29472.3	chr6	-	4300	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	30.2720178007412	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9657	False	NA	0	True	AAAACA	-21	NA	124733045	124719506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726198_124726313_124726424_124726563_124726709_124726885_124732946
ES.29472.4	chr6	-	3288	8	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.7934904974316	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9220	False	NA	0	True	AAAACA	-21	NA	124733482	124719506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724127_124726771_124726885_124733258
ES.29472.6	chr6	-	1669	5	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	39.1431667088906	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCTGTGACGTGTTTT	9831	False	NA	-1	True	AAAACA	-20	NA	124722578	124719507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722492
ES.29472.7	chr6	-	4278	10	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	114	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	28.7711275027201	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	9799	False	NA	-2	True	AAAACA	-19	NA	124732903	124719508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124732827
ES.29472.8	chr6	-	4025	8	NNC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.7067807782437	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	2	True	NA	-2	True	AAAACA	-19	NA	124733024	124719508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724950_124726709_124726885_124732946
ES.29472.9	chr6	-	1521	4	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	41.4916323558806	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTGTGACGTGTTT	9834	False	NA	-2	True	AAAACA	-19	NA	124722575	124719508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124720069_124720192_124720374_124721682_124722380_124722492
ES.29473.1	chr6	-	3201	11	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	32	junction_10	8.97830719011106	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCTGAACTAAGGATTC	9982	False	NA	-1	True	NA	NA	NA	124746520	124737015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.10	chr6	-	5360	8	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	32	junction_7	9.74574737189174	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9985	False	NA	-6	True	ATTAAA	-17	NA	124746517	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124740170_124740689_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.11	chr6	-	2219	11	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	16.3355440680744	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	8715	False	NA	-6	True	ATTAAA	-17	NA	124745300	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740141_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200
ES.29473.12	chr6	-	2847	11	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_10	8.97830719011106	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9954	False	NA	-6	True	ATTAAA	-17	NA	124746478	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.13	chr6	-	2264	12	NNC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.9285595163048	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9985	False	NA	-6	True	ATTAAA	-17	NA	124746517	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743526_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.14	chr6	-	3133	4	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	1504	0	intron_retention	FALSE	canonical	3	37	junction_2	11.1455023315337	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	5723	False	NA	-6	True	ATTAAA	-17	NA	124743789	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738670_124739615_124740888_124743067_124743291_124743493
ES.29473.15	chr6	-	3128	10	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	32	junction_9	9.41629792788369	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9986	False	NA	-6	True	ATTAAA	-17	NA	124746516	124737327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.16	chr6	-	5703	2	FSM	ENSMUSG00000004267.17	ENSMUST00000147307.2	2614	2	-3402	313	1316	-1	multi-exon	FALSE	canonical	3	62	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCCCTTGTCTGAGGA	5535	False	NA	-7	True	ATTAAA	-16	NA	124743977	124737328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124738670_124739615
ES.29473.17	chr6	-	4264	6	NNC	ENSMUSG00000004267.17	novel	1640	10	NA	NA	213	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	20.2543822418755	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCCCTTGTCTGAGGA	9731	False	NA	-7	True	ATTAAA	-16	NA	124746234	124737328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124738670_124739615_124739725_124739967_124740888_124743067_124743291_124743493_124744345_124745414
ES.29473.2	chr6	-	3997	9	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	32	junction_8	9.52627944162882	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGCTGAACTAAGGATT	9990	False	NA	-2	True	NA	NA	NA	124746512	124737016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740888_124743067_124743291_124743493_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.3	chr6	-	4406	8	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	3	junction_4	18.5141975306542	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGGCTGAACTAAGGA	9982	False	NA	-4	True	NA	NA	NA	124746520	124737018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124740888_124743067_124743291_124743995_124744066_124744502_124744562_124744663_124744760_124745200
ES.29473.4	chr6	-	2673	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	121	1	-2	-1	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGGCTGAACTAAGGA	9987	False	NA	-4	True	NA	NA	NA	124746515	124737018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.5	chr6	-	5189	7	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	37	junction_2	8.95823643358446	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGGCTGAACTAAGGA	9986	False	NA	-4	True	NA	NA	NA	124746516	124737018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738670_124739615_124740888_124743067_124743291_124743493_124744066_124744502_124744562_124744663_124744760_124745200
ES.29473.6	chr6	-	2464	12	NIC	ENSMUSG00000004267.17	novel	2795	12	NA	NA	23	3	combination_of_known_junctions	FALSE	canonical	1	3	junction_11	14.8591180232796	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGTCTGAGGACTCT	9919	False	NA	-3	True	ATTAAA	-20	NA	124746424	124737324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746211
ES.29473.7	chr6	-	4598	8	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	-3	3	intron_retention	FALSE	canonical	3	37	junction_3	8.59995253902424	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGTCTGAGGACTCT	9986	False	NA	-3	True	ATTAAA	-20	NA	124746516	124737324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124738326_124738610_124738670_124739615_124740888_124743067_124743291_124743493_124744066_124744502_124744562_124744663_124744760_124745200
ES.29473.8	chr6	-	2374	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	114	307	-9	3	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGTCTGAGGACTCT	9980	False	NA	-3	True	ATTAAA	-20	NA	124746522	124737324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ES.29473.9	chr6	-	2226	7	ISM	ENSMUSG00000004267.17	ENSMUST00000125436.8	2491	10	1248	-3	1241	3	3prime_fragment	FALSE	canonical	3	37	junction_4	8.20060973342836	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTGTCTGAGGACTCT	9963	False	NA	-3	True	ATTAAA	-20	NA	124744052	124737324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124738326_124738610_124738670_124739615_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995
ES.29474.1	chr6	+	2210	4	Antisense	novelGene_ENSMUSG00000030125.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATATAAGTGGCCTT	3042	False	NA	NA	False	NA	NA	NA	124746565	124752677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_124746767_124748027_124748325_124748461_124748596_124751099
ES.29475.1	chr6	+	171	1	Intergenic	novelGene_24454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	124759111	124759282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124759100_124759300
ES.29476.1	chr6	+	248	1	Intergenic	novelGene_24455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAGAGTGGACCTCAT	NA	False	NA	NA	False	AAGAAA	-32	NA	124762437	124762685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124762400_124762700
ES.29477.1	chr6	-	174	1	Intergenic	novelGene_24456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAACAAAAAGAAAAAAATA	4884	False	NA	NA	False	NA	NA	NA	124764675	124764501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124764500_124764700
ES.29478.1	chr6	-	184	1	Intergenic	novelGene_24457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTATATGAGTACACT	3365	False	NA	NA	False	NA	NA	NA	124766194	124766010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124766000_124766200
ES.29479.1	chr6	+	206	1	Intergenic	novelGene_24458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGATTAAGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	124768356	124768562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124768400_124768600
ES.2948.1	chr10	-	178	1	Intergenic	novelGene_2290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGATAGATAGA	2494	False	NA	NA	False	NA	NA	NA	62754064	62753886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62753900_62754100
ES.29480.1	chr6	-	332	1	Intergenic	novelGene_24459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGATAAAT	0	True	NA	NA	False	NA	NA	NA	124769521	124769189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124769200_124769500
ES.29481.1	chr6	-	5198	1	Intergenic	novelGene_24460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	1151	False	NA	NA	False	NA	NA	NA	124779307	124774109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124774100_124779300
ES.29482.1	chr6	+	176	1	Intergenic	novelGene_24461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGCAAGGGCAGAA	NA	False	NA	NA	False	NA	NA	NA	124780908	124781084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124780900_124781100
ES.29483.1	chr6	-	264	1	Intergenic	novelGene_24462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGTAATTGACTGAAA	NA	False	NA	NA	False	AATACA	-19	NA	124781403	124781139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124781100_124781400
ES.29484.1	chr6	+	1206	3	FSM	ENSMUSG00000038451.14	ENSMUST00000047760.10	1213	3	5	2	5	-2	multi-exon	FALSE	canonical	1	1	junction_1	16	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTTCATTATTGTTT	NA	False	NA	17	True	AGTAAA	-20	NA	124785628	124787580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124785743_124786189_124786933_124787231
ES.29484.2	chr6	+	1115	3	NNC	ENSMUSG00000038451.14	novel	1219	3	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTTCATTATTGTTT	NA	False	NA	17	True	AGTAAA	-20	NA	124785852	124787580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124785876_124786189_124786933_124787231
ES.29484.3	chr6	+	1227	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	-12	4	9	-4	multi-exon	FALSE	canonical	3	20	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTGTTTCATTATTGT	NA	False	NA	15	True	AGTAAA	-18	NA	124785856	124787578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124785994_124786189_124786933_124787231
ES.29485.1	chr6	+	159	1	Intergenic	novelGene_24463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	124798506	124798665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124798500_124798700
ES.29486.1	chr6	-	1526	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	76	-1	-62	1	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTCTTTGTCCCAGG	NA	False	NA	-22	True	AATACA	-17	NA	124791183	124787553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ES.29486.10	chr6	-	3875	27	Fusion	ENSMUSG00000023456.17_ENSMUSG00000038429.11	novel	3076	20	NA	NA	-16	-125	multi-exon	FALSE	canonical	0	0	junction_7	474.588261287065	1392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGTGGGTTGTCATA	7889	False	NA	-9	True	AATAAA	-12	NA	124806414	124787679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970_124791104_124792537_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.11	chr6	-	1419	6	FSM	ENSMUSG00000023456.17	ENSMUST00000154883.4	1552	6	3	130	-1	-125	multi-exon	FALSE	canonical	3	1828	junction_3	41.1902901179392	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGTGGGTTGTCATA	NA	False	NA	-9	True	AATAAA	-12	NA	124791118	124787679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789877_124790970
ES.29486.15	chr6	-	1327	7	NNC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	1	-128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	701.09876067657	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCTTTGTGGGTTGTC	NA	False	NA	-12	True	AATAAA	-9	NA	124791120	124787682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124788351_124788479_124788568_124788844_124788934_124789376_124789500_124789583_124789669_124789752_124789877_124790970
ES.29486.16	chr6	-	1324	7	NNC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	1	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	691.36380919648	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGAGCTTTGTGGGTTG	NA	False	NA	-14	True	AATAAA	-7	NA	124791120	124787684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789488_124789579_124789669_124789752_124789877_124790970
ES.29486.17	chr6	-	3163	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-63	-24	-14	5	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTCTTTGGGGGAGAC	7842	False	NA	-3	True	AATAAA	-20	NA	124806461	124791976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.18	chr6	-	3373	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-24	5	intron_retention	FALSE	canonical	3	759	junction_15	51.987771591613	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTCTTTGGGGGAGAC	7881	False	NA	-3	True	AATAAA	-20	NA	124806422	124791976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.19	chr6	-	3938	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-6	4	intron_retention	FALSE	canonical	3	759	junction_14	52.9244417995352	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTCTTTGGGGGAGA	7899	False	NA	-4	True	AATAAA	-19	NA	124806404	124791977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.2	chr6	-	7489	20	Fusion	ENSMUSG00000023456.17_ENSMUSG00000038429.11	novel	3076	20	NA	NA	6	-119	intron_retention	FALSE	canonical	3	759	junction_16	479.966469281292	1392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTTGTCATAATTCCT	7911	False	NA	-3	True	AATAAA	-18	NA	124806392	124787673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970_124792623_124793946_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.20	chr6	-	4394	2	ISM	ENSMUSG00000038429.11	ENSMUST00000131805.2	1112	5	-2096	-404	-2096	3	intron_retention	FALSE	canonical	3	970	junction_1	0	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAGTTCTTTGGGGGAG	8035	False	NA	-5	True	AATAAA	-18	NA	124797696	124791978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124792623_124793946
ES.29486.21	chr6	-	3074	20	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7872	False	NA	-8	True	AATAAA	-15	NA	124806431	124791981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.22	chr6	-	3182	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	31	0	-18	0	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7887	False	NA	-8	True	AATAAA	-15	NA	124806416	124791981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.23	chr6	-	3629	19	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-9	0	intron_retention	FALSE	canonical	3	759	junction_15	54.032140640754	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7896	False	NA	-8	True	AATAAA	-15	NA	124806407	124791981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.24	chr6	-	4199	16	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-17	0	intron_retention	FALSE	canonical	3	759	junction_12	51.9060690093172	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7888	False	NA	-8	True	AATAAA	-15	NA	124806415	124791981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.25	chr6	-	4672	18	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	759	junction_14	45.8806183684191	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7901	False	NA	-8	True	AATAAA	-15	NA	124806402	124791981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.26	chr6	-	4619	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	759	junction_13	54.2179845046826	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7888	False	NA	-9	True	AATAAA	-14	NA	124806415	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.27	chr6	-	3642	15	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-968	-1	intron_retention	FALSE	canonical	3	759	junction_13	56.8864335894826	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	3600	False	NA	-9	True	AATAAA	-14	NA	124802131	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074
ES.29486.28	chr6	-	4440	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	759	junction_13	54.3570013314752	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7903	False	NA	-9	True	AATAAA	-14	NA	124806400	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.29	chr6	-	3575	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	37	junction_15	196.1296261326	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7895	False	NA	-9	True	AATAAA	-14	NA	124806408	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.3	chr6	-	3934	27	Fusion	ENSMUSG00000023456.17_ENSMUSG00000038429.11	novel	3213	20	NA	NA	-4	-123	multi-exon	FALSE	canonical	0	0	junction_7	513.802721563822	1392	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	7901	False	NA	-7	True	AATAAA	-14	NA	124806402	124787677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970_124791104_124792537_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.31	chr6	-	4706	16	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_12	53.2330724268288	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7901	False	NA	-9	True	AATAAA	-14	NA	124806402	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.32	chr6	-	4872	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	759	junction_13	43.0812731212763	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7895	False	NA	-9	True	AATAAA	-14	NA	124806408	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.33	chr6	-	2019	13	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	913	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.825991821323	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	6212	False	NA	-9	True	AATAAA	-14	NA	124799519	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794427_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488
ES.29486.34	chr6	-	3485	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-17	-1	intron_retention	FALSE	canonical	2	5	junction_19	266.421551705744	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7888	False	NA	-9	True	AATAAA	-14	NA	124806415	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124806247
ES.29486.35	chr6	-	3723	19	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_8	206.019566372699	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7903	False	NA	-9	True	AATAAA	-14	NA	124806400	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797258_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.36	chr6	-	3162	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	7	-1	intron_retention	FALSE	canonical	3	759	junction_15	54.9998877664399	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	7912	False	NA	-9	True	AATAAA	-14	NA	124806391	124791982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.37	chr6	-	3040	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	206.119706319734	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTTTCAGTTCTTTGG	7886	False	NA	-10	True	AATAAA	-13	NA	124806417	124791983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.38	chr6	-	5186	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	759	junction_13	47.1684150147109	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTGGTTTCAGTTCTT	7893	False	NA	-13	True	AATAAA	-10	NA	124806410	124791986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.41	chr6	-	3909	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	759	junction_14	53.4845966248654	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTGGTTTCAGTTCTT	7903	False	NA	-13	True	AATAAA	-10	NA	124806400	124791986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.42	chr6	-	4022	10	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	7	-8	intron_retention	FALSE	canonical	3	789	junction_9	50.1841054961075	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGACTGGTTTCAGTT	5152	False	NA	-16	True	AATAAA	-7	NA	124800579	124791989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794776_124794850_124794995_124795506_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415
ES.29486.45	chr6	-	3053	8	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	2128	9	intron_retention	FALSE	canonical	3	827	junction_7	49.7618819776662	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7427	False	NA	-18	True	AATAAA	-5	NA	124798304	124791991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124796425_124796949_124797529_124798039_124798166_124798283
ES.29486.46	chr6	-	3529	18	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	9	intron_retention	FALSE	canonical	1	1	junction_6	207.201955876462	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7903	False	NA	-18	True	AATAAA	-5	NA	124806400	124791991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797123_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.48	chr6	-	3175	21	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	8	9	combination_of_known_splicesites	FALSE	canonical	2	5	junction_20	262.634208548696	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7940	False	NA	-18	True	AATAAA	-5	NA	124806363	124791991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124806247
ES.29486.49	chr6	-	3078	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-9	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	200.87367345419	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7896	False	NA	-18	True	AATAAA	-5	NA	124806407	124791991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798365_124798857_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.50	chr6	-	3055	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	9	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_4	197.875978954221	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGGCTGACTGGTTTCAG	7901	False	NA	-18	True	AATAAA	-5	NA	124806402	124791991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794742_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.51	chr6	-	4328	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	7	7	intron_retention	FALSE	canonical	3	759	junction_13	56.36346195675	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGCTGACTGGTTTC	7912	False	NA	-20	True	AATAAA	-3	NA	124806391	124791993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797529_124798039_124798166_124798283_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.52	chr6	-	3699	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-11	7	intron_retention	FALSE	canonical	3	37	junction_14	201.556435123745	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGCTGACTGGTTTC	7894	False	NA	-20	True	AATAAA	-3	NA	124806409	124791993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.53	chr6	-	3685	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-18	7	intron_retention	FALSE	canonical	3	759	junction_15	55.6755371065135	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGCTGACTGGTTTC	7887	False	NA	-20	True	AATAAA	-3	NA	124806416	124791993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.54	chr6	-	2970	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	8	7	combination_of_known_splicesites	FALSE	canonical	2	3	junction_19	200.11575597507	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGCTGACTGGTTTC	8453	False	NA	-20	True	AATAAA	-3	NA	124805850	124791993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124805812
ES.29486.55	chr6	-	4443	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-3	6	intron_retention	FALSE	canonical	3	759	junction_13	51.6571857900718	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGGGCTGACTGGTTT	7902	False	NA	-21	True	AATAAA	-2	NA	124806401	124791994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.56	chr6	-	6143	13	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	11	6	intron_retention	FALSE	canonical	3	788	junction_9	38.3719913768131	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGGGCTGACTGGTTT	7916	False	NA	-21	True	AATAAA	-2	NA	124806387	124791994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124799683_124800415_124800511_124801094_124801280_124801518_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.58	chr6	-	3931	17	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	6	intron_retention	FALSE	canonical	1	1	junction_5	211.99733746854	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGGGCTGACTGGTTT	7903	False	NA	-21	True	AATAAA	-2	NA	124806400	124791994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794435_124794629_124794995_124795506_124795630_124796335_124797123_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.59	chr6	-	3061	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	200.760465587566	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGGGCTGACTGGTTT	7934	False	NA	-21	True	AATAAA	-2	NA	124806369	124791994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806239
ES.29486.6	chr6	-	1774	6	NIC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	1	-124	intron_retention	FALSE	canonical	3	1846	junction_4	37.5126645281297	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTGGGTTGTCATAA	NA	False	NA	-8	True	AATAAA	-13	NA	124791120	124787678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124788351_124788479_124788568_124788844_124789500_124789583_124789669_124789752_124789877_124790970
ES.29486.60	chr6	-	3043	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	197.803030262844	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACGGGGGCTGACTGG	7928	False	NA	-24	True	AATACA	-12	NA	124806375	124791997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793959_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.61	chr6	-	6185	10	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-528	0	intron_retention	FALSE	canonical	1	9	junction_1	263.893684166957	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	4040	False	NA	-27	True	AATACA	-9	NA	124801691	124792000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124794742_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124800511_124801094_124801280_124801518
ES.29486.62	chr6	-	4434	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	7	-1	intron_retention	FALSE	canonical	3	759	junction_14	54.2218944784342	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7863	False	NA	-28	True	AATACA	-8	NA	124806440	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.65	chr6	-	3064	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	200.336876949622	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7908	False	NA	-28	True	AATACA	-8	NA	124806395	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801657_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.66	chr6	-	3667	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_12	270.20850674824	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7926	False	NA	-28	True	AATACA	-8	NA	124806377	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124799894_124799983_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.68	chr6	-	3191	21	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_20	309.455404703166	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	8418	False	NA	-28	True	AATACA	-8	NA	124805885	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124805812
ES.29486.69	chr6	-	3308	19	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	9	junction_3	200.700040291076	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7887	False	NA	-28	True	AATACA	-8	NA	124806416	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794435_124794629_124794742_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.70	chr6	-	3274	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_15	53.8268829984919	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.71	chr6	-	1470	6	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-788	-1	intron_retention	FALSE	canonical	3	25	junction_4	363.163544425924	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	9343	False	NA	-28	True	AATACA	-8	NA	124796388	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794995_124795437_124795630_124796335
ES.29486.72	chr6	-	5385	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_13	44.2954833335183	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.74	chr6	-	3124	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	200.752421220863	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7850	False	NA	-28	True	AATACA	-8	NA	124806453	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801940_124802071_124802142_124803261_124803388_124806247
ES.29486.75	chr6	-	3590	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_15	55.7249916227721	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.76	chr6	-	3079	21	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_20	263.224899088213	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	8461	False	NA	-28	True	AATACA	-8	NA	124805842	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124805812
ES.29486.77	chr6	-	4330	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_13	51.6677713255565	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.78	chr6	-	3693	17	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2211	-1	intron_retention	FALSE	canonical	0	0	junction_14	214.850529438491	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	9729	False	NA	-28	True	AATACA	-8	NA	124803374	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801614_124801814_124801949_124802074_124802142_124803261
ES.29486.79	chr6	-	4758	16	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	25	junction_3	213.179361102336	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7887	False	NA	-28	True	AATACA	-8	NA	124806416	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.80	chr6	-	3786	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	5	junction_19	268.179354546516	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7903	False	NA	-28	True	AATACA	-8	NA	124806400	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124806247
ES.29486.81	chr6	-	2908	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_19	265.846413911254	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	8453	False	NA	-28	True	AATACA	-8	NA	124805850	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124805812
ES.29486.82	chr6	-	3854	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_14	55.5795511423969	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.83	chr6	-	3637	14	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-432	-1	intron_retention	FALSE	canonical	3	788	junction_13	55.6478785807019	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	4136	False	NA	-28	True	AATACA	-8	NA	124801595	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518
ES.29486.84	chr6	-	4407	17	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	759	junction_13	54.9004781399944	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124798166_124798283_124798372_124798848_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.85	chr6	-	3568	19	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	9	junction_4	201.584073996159	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7903	False	NA	-28	True	AATACA	-8	NA	124806400	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794742_124794850_124794995_124795506_124795630_124796335_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.86	chr6	-	3402	18	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	19	junction_7	206.461823175777	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGGGGCTGA	7901	False	NA	-28	True	AATACA	-8	NA	124806402	124792001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794995_124795506_124795630_124796335_124796425_124796949_124797527_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.87	chr6	-	3059	20	NNC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	313.895319283585	953	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAAGTACGGGGGCTG	7931	False	NA	-29	True	AATACA	-7	NA	124806372	124792002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803265_124803388_124806247
ES.29486.88	chr6	-	3443	20	NNC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-9	-3	intron_retention	FALSE	canonical	1	3	junction_18	267.625342783009	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAAGTACGGGGGCT	7923	False	NA	-30	True	AATACA	-6	NA	124806380	124792003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804963_124805103_124806247
ES.29486.89	chr6	-	2947	18	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-2	504	intron_retention	FALSE	canonical	3	759	junction_14	45.8806183684191	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAATTTCTCCATGAAAA	7903	False	NA	NA	False	AGTAAA	-20	NA	124806400	124793704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29486.9	chr6	-	1615	6	NIC	ENSMUSG00000023456.17	novel	1607	7	NA	NA	1	-124	intron_retention	FALSE	canonical	3	1828	junction_2	42.4641024866887	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTGGGTTGTCATAA	NA	False	NA	-8	True	AATAAA	-13	NA	124791120	124787678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124788351_124788479_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ES.29486.90	chr6	-	1678	5	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	-1914	365	intron_retention	FALSE	canonical	3	853	junction_1	28.4824507372522	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCCCCACAAGGATCGG	8217	False	NA	NA	False	AATAAA	-8	NA	124797514	124793843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374
ES.29486.91	chr6	-	1973	14	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	-15	4179	-15	-1971	5prime_fragment	FALSE	canonical	3	759	junction_10	44.1057094883129	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGGTTTTTCATTGTT	7890	False	NA	NA	False	NA	NA	NA	124806413	124796179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ES.29487.1	chr6	+	1323	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	480	173	-49	-4	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGATTCATGATCTT	1295	False	NA	NA	False	CATAAA	-21	NA	124807130	124810491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.10	chr6	+	2014	4	ISM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	-34	252	-16	-252	intron_retention	FALSE	canonical	3	695	junction_1	105.581984995337	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTTAAGAAGTTAGAGC	1328	False	NA	31	True	ATTAAA	-18	NA	124807163	124810243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528
ES.29487.12	chr6	+	845	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	2	-237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	347.474660946665	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAAGCTACACCGGGT	1346	False	NA	46	True	ATTAAA	-33	NA	124807181	124810258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124807237_124807465_124807614_124808324_124808452_124809302_124809403_124809528_124809633_124809947
ES.29487.13	chr6	+	1092	7	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	3	-237	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	434.945207277116	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAAGCTACACCGGGT	1347	False	NA	46	True	ATTAAA	-33	NA	124807182	124810258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.17	chr6	+	1429	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	543	4	-4	-4	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCCCTTGTCTTGTCTT	1358	False	NA	35	True	NA	NA	NA	124807193	124810660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.18	chr6	+	1466	7	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	434.945207277116	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTCTTGTCGTCTTCTCC	1362	False	NA	22	True	NA	NA	NA	124807197	124810647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.19	chr6	+	990	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	6	-258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	438.832359791299	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGATGCTTTAAGAAGT	1368	False	NA	25	True	ATTAAA	-12	NA	124807203	124810237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124807231_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.2	chr6	+	1093	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	490	393	-39	-224	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGGTCTTGTGTGTATAG	1305	False	NA	59	True	TTTAAA	-31	NA	124807140	124810271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.20	chr6	+	1698	6	NIC	ENSMUSG00000023505.14	novel	1917	5	NA	NA	16	-257	intron_retention	FALSE	canonical	3	31	junction_1	419.796141001796	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATGCTTTAAGAAGTT	1378	False	NA	26	True	ATTAAA	-13	NA	124807213	124810238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ES.29487.21	chr6	+	1763	5	NIC	ENSMUSG00000023505.14	novel	612	4	NA	NA	49	-249	intron_retention	FALSE	canonical	3	47	junction_1	368.049843771194	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAGAAGTTAGAGCAAA	1411	False	NA	34	True	ATTAAA	-21	NA	124807246	124810246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807381_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ES.29487.3	chr6	+	1064	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-39	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	347.474660946665	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTTAAGAAGTTAGAGC	1305	False	NA	31	True	ATTAAA	-18	NA	124807140	124810243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124807237_124807465_124807614_124808324_124808446_124809103_124809403_124809528_124809633_124809947
ES.29487.5	chr6	+	1621	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-37	-2	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTTGTCTTGTCTTGC	1307	False	NA	37	True	NA	NA	NA	124807142	124810662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29487.6	chr6	+	1296	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	347.474660946665	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGATTCATGATCTT	1318	False	NA	NA	False	CATAAA	-21	NA	124807153	124810491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124807237_124807465_124807614_124808324_124808456_124809116_124809403_124809528_124809633_124809947
ES.29487.7	chr6	+	1719	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	-39	237	-21	-237	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAAGCTACACCGGGT	1323	False	NA	46	True	ATTAAA	-33	NA	124807158	124810258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ES.29487.8	chr6	+	1201	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	-21	-237	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAAGCTACACCGGGT	1323	False	NA	46	True	ATTAAA	-33	NA	124807158	124810258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ES.29488.1	chr6	-	211	1	Intergenic	novelGene_24464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTCCCCATATTTCTA	9758	False	NA	NA	False	NA	NA	NA	124808288	124808077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124808100_124808300
ES.29489.1	chr6	-	5459	3	NIC	ENSMUSG00000023439.12	novel	1779	9	NA	NA	-20	2	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATGTCTGGCGCC	2504	False	NA	NA	False	AATAAA	-17	NA	124816940	124811207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124814249_124814353_124816714_124816882
ES.2949.1	chr10	-	512	1	Intergenic	novelGene_2291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCACTCTTGTTCTTGT	8061	False	NA	NA	False	AATAAA	-32	NA	62756340	62755828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62755800_62756300
ES.29490.1	chr6	+	208	1	Intergenic	novelGene_24465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGGTAAACTGACAGC	NA	False	NA	NA	False	NA	NA	NA	124828173	124828381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124828200_124828400
ES.29491.1	chr6	-	4357	8	NIC	ENSMUSG00000023191.10	novel	2850	15	NA	NA	442	-6	intron_retention	FALSE	canonical	0	0	junction_1	5.823947745897	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAAGGCCTGGTCTGCTC	5948	False	NA	NA	False	AATAAA	-21	NA	124834250	124818057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124818803_124821978_124822055_124822164_124822283_124822904_124823007_124827588_124827714_124828041_124828095_124830013_124833060_124834158
ES.29491.2	chr6	-	1798	5	NIC	ENSMUSG00000023191.10	novel	2901	14	NA	NA	282	19	intron_retention	FALSE	canonical	3	10	junction_2	3.56195171219375	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAGA	1798	False	NA	NA	False	NA	NA	NA	124827674	124818149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124823007_124827588
ES.29491.3	chr6	-	2693	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	40	117	17	0	multi-exon	FALSE	canonical	1	4	junction_14	4.42396073348629	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	5523	False	NA	NA	False	NA	NA	NA	124834675	124818168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
ES.29491.4	chr6	-	188	1	Intergenic	novelGene_24466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGGCCACAGGAT	NA	False	NA	NA	False	NA	NA	NA	124829837	124829649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124829600_124829800
ES.29492.1	chr6	-	3342	3	NIC	ENSMUSG00000038390.12	novel	2855	6	NA	NA	-24	1	intron_retention	FALSE	canonical	1	2	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGATGTTCAGCGTTT	NA	False	NA	-2	True	ATTAAA	-19	NA	124840904	124835408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124837176_124837781_124839086_124840633
ES.29492.2	chr6	-	3631	5	NNC	ENSMUSG00000038390.12	novel	3564	4	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_2	4.60298815988049	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGATGTTCAGCGTT	NA	False	NA	-3	True	ATTAAA	-18	NA	124840706	124835409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124836184_124836454_124839086_124839448_124839550_124839871_124839924_124840633
ES.29492.3	chr6	-	3081	4	NIC	ENSMUSG00000038390.12	novel	2855	6	NA	NA	31	0	intron_retention	FALSE	canonical	1	2	junction_3	4.08248290463863	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGATGTTCAGCGTT	NA	False	NA	-3	True	ATTAAA	-18	NA	124840915	124835409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124836184_124836454_124837176_124837781_124839086_124840633
ES.29492.4	chr6	-	2290	4	ISM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	1931	3	1726	0	3prime_fragment	FALSE	canonical	2	6	junction_2	2.62466929133727	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGATGTTCAGCGTT	1249	False	NA	-3	True	ATTAAA	-18	NA	124838949	124835409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781
ES.29492.5	chr6	-	2643	5	NNC	ENSMUSG00000038390.12	novel	2855	6	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.58257569495584	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACCTTGATGTTCAGC	NA	False	NA	-6	True	ATTAAA	-15	NA	124840904	124835412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124836184_124836454_124836613_124836985_124837176_124837832_124839086_124840633
ES.29493.1	chr6	+	187	1	Intergenic	novelGene_24467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAATGAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	124867424	124867611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124867400_124867600
ES.29494.2	chr6	-	3273	11	NNC	ENSMUSG00000023274.15	novel	3108	10	NA	NA	-9544	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.46969384566991	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	124874728	124841658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124843239_124843566_124843635_124843971_124844091_124844627_124844829_124847207_124847544_124849406_124849644_124849931_124850094_124856269_124856438_124856565_124856657_124865042_124865121_124874495
ES.29494.4	chr6	-	3403	9	NIC	ENSMUSG00000023274.15	novel	3108	10	NA	NA	0	-12	intron_retention	FALSE	canonical	0	0	junction_7	1.58113883008419	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATGCACTGTGTGT	5362	False	NA	NA	False	AATAAA	-7	NA	124865163	124841666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124843635_124843971_124844091_124844627_124844829_124847207_124847544_124849406_124849644_124849931_124850094_124856269_124856438_124856565_124856657_124865042
ES.29495.1	chr6	-	1294	6	NNC	ENSMUSG00000030124.3	novel	2001	8	NA	NA	-203	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.09901951359278	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTGGAGTCTGTCTTT	987	False	NA	NA	False	AATAAA	-20	NA	124887217	124881321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124881564_124881800_124881932_124882218_124882456_124885339_124885616_124886195_124886453_124887066
ES.29496.1	chr6	-	808	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-57	3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	271.262211706681	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCTGCTTTCCCGCAGT	NA	False	NA	-3	True	AATAAA	-29	NA	124892549	124890640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124892506
ES.29496.10	chr6	-	1167	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	273.958368187577	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	-8	True	AATAAA	-24	NA	124894907	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124891196_124891370_124891452_124891597_124891677_124891880_124891953_124894522
ES.29496.11	chr6	-	438	2	NNC	ENSMUSG00000030122.13	novel	585	2	NA	NA	440	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCCGTCTCCTGCTTTCC	NA	False	NA	-9	True	AATAAA	-23	NA	124891197	124890646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124890985_124891097
ES.29496.13	chr6	-	1344	4	NIC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	521	junction_2	104.731402485915	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTAACCCGTCTCCTG	NA	False	NA	-15	True	AATAAA	-17	NA	124894945	124890652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124891196_124891370_124891677_124891880_124891953_124894522
ES.29496.14	chr6	-	1372	3	NIC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	111	-2	intron_retention	FALSE	canonical	3	521	junction_1	5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTAACCCGTCTCCTG	NA	False	NA	-15	True	AATAAA	-17	NA	124894798	124890652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124891677_124891880_124891953_124894522
ES.29496.2	chr6	-	1352	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	-205	2	-205	-2	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	9986	False	NA	-8	True	AATAAA	-24	NA	124895114	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ES.29496.4	chr6	-	3719	4	FSM	ENSMUSG00000030122.13	ENSMUST00000181150.2	629	4	-2724	-366	-2	-2	multi-exon	FALSE	canonical	3	521	junction_3	94.9139961579253	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	-8	True	AATAAA	-24	NA	124894911	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880
ES.29496.5	chr6	-	843	5	FSM	ENSMUSG00000030122.13	ENSMUST00000204671.3	744	5	-18	-81	-18	-2	multi-exon	FALSE	canonical	2	10	junction_4	276.631975736718	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	8016	False	NA	-8	True	AATAAA	-24	NA	124897084	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124897001
ES.29496.6	chr6	-	241	2	NNC	ENSMUSG00000030122.13	novel	585	2	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	-8	True	AATAAA	-24	NA	124894921	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124890725_124894759
ES.29496.7	chr6	-	1136	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	275.184483574202	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	-8	True	AATAAA	-24	NA	124894907	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124891196_124891370_124891421_124891597_124891677_124891880_124891953_124894522
ES.29496.8	chr6	-	869	5	NNC	ENSMUSG00000030122.13	novel	1149	5	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	335.42314693533	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	False	NA	-8	True	AATAAA	-24	NA	124892541	124890645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124891196_124891370_124891430_124891597_124891677_124891878_124891953_124892434
ES.29497.1	chr6	+	172	1	Intergenic	novelGene_24468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	124900610	124900782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124900600_124900800
ES.29498.1	chr6	+	243	2	Intergenic	novelGene_24470	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTCTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	124901227	124919495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124901326_124919350
ES.29498.10	chr6	+	1743	8	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	3449	junction_7	255.903680859715	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908358	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.11	chr6	+	1847	7	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	3577	junction_4	229.212237893181	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908358	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911709_124912195
ES.29498.13	chr6	+	1735	8	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	3449	junction_7	228.861066490354	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908361	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.15	chr6	+	2415	5	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	2	-6	intron_retention	FALSE	canonical	3	3449	junction_4	251.246268629009	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908369	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909776_124910916_124911709_124912195_124912409_124912585
ES.29498.16	chr6	+	1228	9	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1620.75198114178	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908369	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908399_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911365_124911644_124911709_124912195_124912409_124912585
ES.29498.17	chr6	+	2603	5	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-22	7	5	-6	intron_retention	FALSE	canonical	3	3577	junction_4	245.583997850023	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908372	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916
ES.29498.18	chr6	+	3294	3	ISM	ENSMUSG00000030120.15	ENSMUST00000203060.2	593	5	-1203	-845	-4	-6	intron_retention	FALSE	canonical	3	3577	junction_1	148.5	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908383	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124909776_124910916_124910971_124911253
ES.29498.19	chr6	+	2615	5	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	3577	junction_2	191.698167701207	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGTGAAGATTCTGG	NA	False	NA	19	True	AATAAA	-9	NA	124908383	124913100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909776_124910916_124910971_124911253_124911383_124911548
ES.29498.2	chr6	+	178	1	Intergenic	novelGene_24469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTAGTCAGG	NA	False	NA	NA	False	NA	NA	NA	124901227	124901405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124901200_124901400
ES.29498.20	chr6	+	1220	5	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1597.10253271354	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908383	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908586_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.21	chr6	+	3063	3	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	3577	junction_2	270.5	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908385	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909776_124910916
ES.29498.22	chr6	+	2054	6	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	3577	junction_3	208.197406323902	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908385	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909501_124909739_124909776_124910916_124910971_124911253_124911709_124912195
ES.29498.23	chr6	+	4711	1	NIC	ENSMUSG00000030120.15	novel	3489	6	NA	NA	3	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908390	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908400_124913100
ES.29498.24	chr6	+	1465	9	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1310.37474959456	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908395	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912413_124912591
ES.29498.25	chr6	+	1485	9	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	1272.36698101413	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908395	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908550_124909061_124909140_124909355_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.27	chr6	+	2295	6	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	3	7	3	-6	intron_retention	FALSE	canonical	3	3577	junction_4	224.755333640828	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908397	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253
ES.29498.28	chr6	+	1881	7	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	3	-6	intron_retention	FALSE	canonical	3	3577	junction_3	220.208991642031	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908397	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
ES.29498.29	chr6	+	1164	9	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1310.37474959456	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGAAAAAAGTGAAGATT	NA	False	NA	15	True	AATAAA	-5	NA	124908397	124913096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912288_124912760
ES.29498.3	chr6	+	1553	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-76	-2	-30	2	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGCTGTACTTTT	NA	False	NA	29	True	AATAAA	-19	NA	124908318	124913110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.31	chr6	+	1337	8	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1387.03721828146	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908399	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124911325_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.32	chr6	+	2523	5	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	10	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	1959.57181228451	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908404	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124908550_124909068_124909140_124909373_124909776_124910916_124910974_124911253
ES.29498.33	chr6	+	1243	8	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	12	-6	combination_of_known_splicesites	FALSE	canonical	1	37	junction_7	1383.82398314472	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908406	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912585
ES.29498.34	chr6	+	2834	4	NIC	ENSMUSG00000030120.15	novel	1451	9	NA	NA	12	0	intron_retention	FALSE	canonical	3	3577	junction_2	208.808258670219	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	26	True	AATAAA	-16	NA	124908406	124913107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124909501_124909739_124909776_124910916_124911709_124912195
ES.29498.38	chr6	+	2399	4	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	235	0	intron_retention	FALSE	canonical	3	3449	junction_3	178.019349759763	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	26	True	AATAAA	-16	NA	124909107	124913107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124909776_124910916_124910971_124911253_124912409_124912585
ES.29498.39	chr6	+	1712	4	NIC	ENSMUSG00000030120.15	novel	593	5	NA	NA	-108	-6	intron_retention	FALSE	canonical	3	3577	junction_1	122.09923104681	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124909478	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124909776_124910916_124910971_124911253_124911709_124912195
ES.29498.40	chr6	+	2545	3	NIC	ENSMUSG00000030120.15	novel	593	5	NA	NA	317	-6	intron_retention	FALSE	canonical	3	3695	junction_2	88.5	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124909903	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124911383_124911548_124911709_124912195
ES.29498.41	chr6	+	1395	5	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	2199	7	1007	-6	3prime_fragment	FALSE	canonical	3	3449	junction_4	173.82534337662	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124910593	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ES.29498.42	chr6	+	1093	5	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	2477	7	1329	-7	3prime_fragment	FALSE	canonical	3	152	junction_4	1587.21271022507	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGTGAAGATTCTGG	NA	False	NA	19	True	AATAAA	-9	NA	124910915	124913100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ES.29498.43	chr6	+	271	1	Intergenic	novelGene_24473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTTTCTTTCTT	4334	False	NA	NA	False	NA	NA	NA	124919250	124919521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124919200_124919500
ES.29498.44	chr6	+	166	1	Intergenic	novelGene_24474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	4335	False	NA	NA	False	NA	NA	NA	124919251	124919417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124919300_124919400
ES.29498.5	chr6	+	2173	7	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3449	junction_6	282.276903057973	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	26	True	AATAAA	-16	NA	124908348	124913107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124912409_124912585
ES.29498.6	chr6	+	2523	6	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	0	-6	intron_retention	FALSE	canonical	3	3449	junction_5	295.676444783821	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908348	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909776_124910916_124911383_124911548_124912409_124912585
ES.29498.7	chr6	+	1535	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	-90	6	0	-6	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908348	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ES.29498.8	chr6	+	1691	8	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	-46	7	0	-6	intron_retention	FALSE	canonical	3	3577	junction_4	212.973122765311	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908348	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195
ES.29498.9	chr6	+	2133	6	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	7	-6	intron_retention	FALSE	canonical	3	3577	junction_4	249.915665775477	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGAAGATTCTGGC	NA	False	NA	20	True	AATAAA	-10	NA	124908355	124913101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124911709_124912195
ES.29499.1	chr6	-	773	1	Antisense	novelGene_ENSMUSG00000055818.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGATATGGTTAAGG	8880	False	NA	NA	False	NA	NA	NA	124902871	124902098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_124902100_124902900
ES.295.1	chr1	+	214	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGGAAGAAAACTGGTTT	3769	False	NA	NA	False	NA	NA	NA	36775111	36775325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36775100_36775300
ES.2950.1	chr10	+	3170	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	-23	-2	-23	2	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGGCTTGGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	62756388	62782279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
ES.2950.100	chr10	+	6576	16	NIC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	7	-2	intron_retention	FALSE	canonical	3	58	junction_7	8.8558831669499	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTAAGAAATTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	62816078	62849732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62845184_62847196_62847275_62847368
ES.2950.101	chr10	+	4216	18	NNC	ENSMUSG00000020070.19	novel	720	4	NA	NA	313	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4433721017632	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAGACTTGTTTGTA	NA	False	NA	NA	False	TATAAA	-36	NA	62816384	62849764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816489_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.102	chr10	+	4215	17	ISM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	2250	3	1064	-3	3prime_fragment	FALSE	canonical	3	50	junction_13	9.78978262016067	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62818270	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.103	chr10	+	3641	14	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-9142	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	19.0200765931546	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62828893	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62829020_62829758_62829821_62830483_62830550_62831091_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.105	chr10	+	3990	7	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-1955	-3	intron_retention	FALSE	canonical	0	0	junction_4	33.3703960619788	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62836080	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62836180_62837961_62838060_62840392_62840556_62842403_62843544_62845134_62845184_62847196_62847275_62847368
ES.2950.106	chr10	+	4314	2	ISM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	29306	0	7291	0	3prime_fragment	FALSE	canonical	3	75	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62845326	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_62847275_62847368
ES.2950.107	chr10	+	6867	1	Genic_Genomic	ENSMUSG00000020070.19	novel	NA	NA	NA	NA	11037	2950	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAACAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62849072	62855939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_62849100_62855900
ES.2950.11	chr10	+	4129	22	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	111.263267699763	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCACTGAGTCATTT	NA	False	NA	54	True	AATAAA	-15	NA	62782762	62809959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62796828_62796880_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805657_62807622_62807770_62809029
ES.2950.13	chr10	+	5179	18	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-16	2	intron_retention	TRUE	canonical	0	0	junction_16	107.655512364953	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782788	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794958_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62802286_62802378_62802584_62807622_62807770_62809029
ES.2950.14	chr10	+	4224	20	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_19	67.0662631768738	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782794	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.15	chr10	+	3616	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-8	-3200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	67.6358999234042	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGTATGTGTATAG	NA	False	NA	NA	False	NA	NA	NA	62782796	62806346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805944_62805984
ES.2950.16	chr10	+	4088	22	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	110.352373143958	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782798	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792795_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62796828_62796880_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.17	chr10	+	4124	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9729300546823	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782798	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807764_62809023
ES.2950.18	chr10	+	4246	22	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.9380192857204	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTCACTGAGTCATT	NA	False	NA	53	True	AATAAA	-14	NA	62782798	62809958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62808093_62808213_62809024
ES.2950.2	chr10	+	3070	8	NIC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	28.5328310719352	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTGGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	62756422	62782277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
ES.2950.22	chr10	+	9269	30	Fusion	ENSMUSG00000020070.19_ENSMUSG00000036875.16	novel	3651	21	NA	NA	-3	5	intron_retention	FALSE	canonical	0	0	junction_3	112.23417001054	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATTAACACTTACTTA	NA	False	NA	NA	False	AATAAA	-26	NA	62782801	62849739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_62782949_62784961_62785145_62786513_62786698_62792708_62792929_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62845184_62847196_62847275_62847368
ES.2950.23	chr10	+	6084	19	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_18	69.3775900417419	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782802	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62807770_62809029
ES.2950.24	chr10	+	4057	17	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	109.688034186733	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAACTTCACTGAGTCA	NA	False	NA	51	True	AATAAA	-12	NA	62782802	62809956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794958_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800760_62806995_62807770_62809029
ES.2950.26	chr10	+	5638	19	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_17	90.6096634532494	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782803	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62802584_62803431_62803522_62805554_62805841_62807622_62807770_62809029
ES.2950.27	chr10	+	4236	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	86.7407631970114	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782803	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792591_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.29	chr10	+	6001	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_2	104.482871132597	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782803	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785025_62786513_62786698_62789962_62790109_62791092_62791225_62792591_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62807770_62809029
ES.2950.3	chr10	+	2773	10	NNC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	-2	3267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.6499947884089	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATCTTAAGCAGGCGG	NA	False	NA	NA	False	AATAAA	-19	NA	62756443	62785544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093_62781923_62785529
ES.2950.30	chr10	+	6128	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_19	65.6003175453432	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782803	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807762_62809028
ES.2950.31	chr10	+	7326	19	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_9	91.275867295892	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782803	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795994_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62802286_62802378_62802584_62803431_62803522_62805554_62807770_62809029
ES.2950.32	chr10	+	4135	21	NNC	ENSMUSG00000036875.16	novel	3651	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.430311659379	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782803	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791075_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809029
ES.2950.33	chr10	+	4146	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.3448174472562	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782803	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794929_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.34	chr10	+	4038	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	86.7511383210618	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782806	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805657_62807622_62807770_62809029
ES.2950.35	chr10	+	4135	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	87.0351078588405	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782806	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807606_62807770_62809029
ES.2950.39	chr10	+	3451	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	4	667	4	-249	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTCTAAATTTGGAAAT	NA	False	NA	NA	False	TTTAAA	-23	NA	62782808	62809297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.4	chr10	+	4901	28	Fusion	ENSMUSG00000036875.16_ENSMUSG00000071253.9	novel	3145	9	NA	NA	-6	3	multi-exon	FALSE	canonical	0	0	junction_8	104.210376014751	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTCATTTTTCATTTT	NA	False	NA	62	True	AATAAA	-23	NA	62756452	62809967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.40	chr10	+	4404	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.0098270312038	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTGAGTCATTTTTC	NA	False	NA	57	True	AATAAA	-18	NA	62782808	62809962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785433_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.42	chr10	+	4862	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	99.6605614072086	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782815	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794958_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62801435_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.43	chr10	+	4186	20	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_19	67.5705028336004	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782815	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.44	chr10	+	3967	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	67.6358999234042	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782816	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62809024
ES.2950.46	chr10	+	4818	14	NNC	ENSMUSG00000036875.16	novel	3430	15	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_4	77.7360881977221	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGTTTTTATTTTAAG	NA	False	NA	NA	False	NA	NA	NA	62782816	62801914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791075_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62799809_62800678
ES.2950.47	chr10	+	4019	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	85.8949940334127	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782816	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792795_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.48	chr10	+	3502	15	FSM	ENSMUSG00000036875.16	ENSMUST00000129785.2	3430	15	-72	0	12	0	multi-exon	FALSE	canonical	3	200	junction_8	31.8382391062658	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGTTTTTATTTTAAG	NA	False	NA	NA	False	NA	NA	NA	62782816	62801914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678
ES.2950.5	chr10	+	3138	9	NNC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	142	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	28.2596775459311	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGATGGCTTGGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	62756600	62782275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62756845_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
ES.2950.52	chr10	+	3845	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	15	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	85.8949940334127	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATCTCTATATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	62782819	62809789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792795_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.53	chr10	+	5991	20	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_19	67.6358999234042	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782819	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62807770_62809029
ES.2950.54	chr10	+	5429	20	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_19	67.5964889514208	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782819	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.55	chr10	+	4156	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	102.061488819241	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782823	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802157_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807606_62807770_62809029
ES.2950.56	chr10	+	4198	21	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	87.0351078588405	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTCACTGAGTCATT	NA	False	NA	53	True	AATAAA	-14	NA	62782825	62809958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805841_62807622_62807770_62809029
ES.2950.58	chr10	+	3912	20	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	23	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	87.0691768150276	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782827	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.59	chr10	+	4096	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	101.56489304873	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAACTTCACTGAGTCA	NA	False	NA	51	True	AATAAA	-12	NA	62782832	62809956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791232_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797389_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.6	chr10	+	3880	2	FSM	ENSMUSG00000071253.9	ENSMUST00000152350.2	398	2	-1426	-2056	-1426	-8	multi-exon	FALSE	canonical	3	93	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGTTTTGATGGCTT	NA	False	NA	10	True	ATTAAA	-11	NA	62776794	62782269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62778499_62780093
ES.2950.60	chr10	+	2766	14	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.081723337601	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782832	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793873_62800777_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.61	chr10	+	4186	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_4	88.9644331185829	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782832	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791075_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.62	chr10	+	3967	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.2412460692924	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGAGTCATTTTTCAT	NA	False	NA	59	True	AATAAA	-20	NA	62782834	62809964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791075_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62809024
ES.2950.63	chr10	+	3984	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	102.137786837194	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAACTTCACTGAGTCAT	NA	False	NA	52	True	AATAAA	-13	NA	62782842	62809957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62796828_62796880_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62809026
ES.2950.65	chr10	+	5314	20	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_19	87.8707184327904	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782847	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792795_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.67	chr10	+	4258	22	NNC	ENSMUSG00000036875.16	novel	3651	21	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	119.106709144638	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCACTGAGTCATTT	NA	False	NA	54	True	AATAAA	-15	NA	62782865	62809959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794049_62794154_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805841_62807622_62807772_62809032
ES.2950.68	chr10	+	5894	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	87.0351078588405	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAACTTCACTGAGTCA	NA	False	NA	51	True	AATAAA	-12	NA	62782867	62809956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805941_62805982_62807770_62809029
ES.2950.69	chr10	+	4906	21	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	65.9729300546823	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62782877	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62808623_62809024
ES.2950.7	chr10	+	4350	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	-220	-8	-220	8	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTTTCATTTTGTGAC	NA	False	NA	67	True	AATAAA	-28	NA	62782584	62809972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.70	chr10	+	5425	19	NIC	ENSMUSG00000036875.16	novel	3651	21	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_18	88.8231701503361	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782892	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797503_62798174_62798285_62799583_62799809_62800678_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809029
ES.2950.71	chr10	+	3796	19	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	3624	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	88.8720817443827	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62786512	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793951_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.72	chr10	+	3668	18	ISM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	7097	4	7013	2	3prime_fragment	FALSE	canonical	0	0	junction_17	69.2587046232455	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62789901	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.74	chr10	+	2832	13	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-6509	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.731939618809	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTCATTTTTCATTTT	NA	False	NA	62	True	AATAAA	-23	NA	62794950	62809967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62795149_62795990_62796222_62797199_62797317_62797398_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.75	chr10	+	3205	4	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1992	2569	intron_retention	FALSE	canonical	3	267	junction_3	13.2748718344933	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	62799467	62804483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62799809_62800678_62802286_62802378_62802584_62803431
ES.2950.76	chr10	+	5056	7	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-1761	0	intron_retention	FALSE	non_canonical	0	0	junction_6	103.348386000406	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62799698	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805941_62805982
ES.2950.77	chr10	+	3718	6	FSM	ENSMUSG00000036875.16	ENSMUST00000137378.2	2085	6	-1628	-5	-1333	0	multi-exon	FALSE	canonical	0	0	junction_5	108.538656708106	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGAGTCATTTTTCA	NA	False	NA	58	True	AATAAA	-19	NA	62800126	62809963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.79	chr10	+	4759	1	NIC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	3446	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCACTGAGTCATTT	NA	False	NA	54	True	AATAAA	-15	NA	62805200	62809959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62805200_62810000
ES.2950.8	chr10	+	4241	22	NNC	ENSMUSG00000036875.16	novel	4122	21	NA	NA	-72	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	99.7264285142995	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62782732	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62796828_62796880_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ES.2950.80	chr10	+	1167	3	NNC	ENSMUSG00000036875.16	novel	2085	6	NA	NA	3891	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	124.5	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCACTGAGTCATTTT	NA	False	NA	55	True	AATAAA	-16	NA	62805645	62809960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62805738_62807622_62807777_62809039
ES.2950.81	chr10	+	2716	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-14	-1439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.8771277195675	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTCCTTCACTTATAA	NA	False	NA	NA	False	ACTAAA	-21	NA	62815987	62848295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833764_62833867_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.82	chr10	+	4098	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.949030158418	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62815995	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816102_62818496_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.83	chr10	+	4155	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	-25	0	-6	0	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62815995	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.84	chr10	+	5712	16	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	24.3803199322732	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62815998	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62845184_62847196_62847275_62847368
ES.2950.85	chr10	+	5734	17	NIC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	50	junction_14	9.94359090067567	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62816003	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62845184_62847196_62847275_62847368
ES.2950.86	chr10	+	4181	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	17.5952179725552	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTAAGAAATTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	62816010	62849732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.87	chr10	+	6399	17	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_10	19.5508152003951	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTAAGAAATTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	62816012	62849732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62835335_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62845184_62847196_62847275_62847368
ES.2950.89	chr10	+	4270	17	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	7	junction_11	16.9308104870972	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62816016	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.9	chr10	+	1007	2	FSM	ENSMUSG00000036875.16	ENSMUST00000131715.2	603	2	-104	-300	-50	300	multi-exon	FALSE	canonical	3	331	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGTAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	62782754	62785774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62782949_62784961
ES.2950.90	chr10	+	4165	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.3104203952212	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62816021	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830448_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840560_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.91	chr10	+	3479	19	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.4595821415195	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTAAGAAATTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	62816026	62849732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368_62847709_62848351
ES.2950.92	chr10	+	3805	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	10	315	0	-315	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACGAGTTCCCCTGCTG	NA	False	NA	NA	False	CATAAA	-23	NA	62816030	62849419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.93	chr10	+	5752	17	NNC	ENSMUSG00000020070.19	novel	4502	19	NA	NA	0	2	intron_retention	FALSE	canonical	3	7	junction_12	18.1227369276829	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAATTAACACTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	62816030	62849736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62845184_62847196_62847275_62847368
ES.2950.94	chr10	+	5720	17	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_10	19.5508152003951	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTAAGAAATTAACAC	NA	False	NA	NA	False	AATAAA	-19	NA	62816032	62849732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62835994_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62845184_62847196_62847275_62847368
ES.2950.95	chr10	+	4092	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	18.60814272781	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCGAAGATCTAAGAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	62816032	62849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843470_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.96	chr10	+	4076	16	NIC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	18.5719023138599	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62816040	62849734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ES.2950.99	chr10	+	4094	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	18.9862452488774	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATCTAAGAAATTAACA	NA	False	NA	NA	False	AATAAA	-18	NA	62816073	62849731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843568_62845134_62845184_62847196_62847275_62847368
ES.29500.1	chr6	-	186	1	Intergenic	novelGene_24471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3982	False	NA	NA	False	NA	NA	NA	124916124	124915938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124915900_124916100
ES.29501.1	chr6	-	138	1	Intergenic	novelGene_24472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	2554	False	NA	NA	False	NA	NA	NA	124917552	124917414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124917400_124917600
ES.29502.1	chr6	-	192	1	Intergenic	novelGene_24475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	124923837	124923645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124923600_124923800
ES.29503.1	chr6	-	3330	9	NNC	ENSMUSG00000030127.16	novel	795	7	NA	NA	29	5183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	760.020887870853	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGGGTCATCTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	124942446	124930192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124932555_124934832_124934888_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.10	chr6	-	2101	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	24	-3	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATGTATGCCAGGA	NA	False	NA	-19	True	ATTAAA	-10	NA	124942229	124935378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.12	chr6	-	1284	8	NNC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	-4	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	848.003513662339	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTTTTGTCCAAATTAAA	NA	False	NA	-4	True	CATAAA	-24	NA	124942375	124935407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938123_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ES.29503.14	chr6	-	2006	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	19	-40	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	739.613357347842	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942234	124935415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941749_124941892_124942181
ES.29503.15	chr6	-	2068	6	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	15	-40	intron_retention	FALSE	canonical	3	57	junction_5	694.444065422119	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942460	124935415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
ES.29503.16	chr6	-	2978	6	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	314	-40	intron_retention	FALSE	canonical	3	1123	junction_1	275.047195950077	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124941856	124935415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686
ES.29503.17	chr6	-	1045	7	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	12	-40	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	747.896531762397	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTCCCTTTTGTCC	NA	False	NA	-12	True	CATAAA	-16	NA	124942463	124935415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
ES.29503.19	chr6	-	2063	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-27	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	637.324061356288	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGTCCCTTTTGTC	NA	False	NA	-13	True	CATAAA	-15	NA	124942197	124935416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942149
ES.29503.2	chr6	-	2518	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	14	365	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAACTGCTTCCAAAG	NA	False	NA	NA	False	NA	NA	NA	124942461	124935010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.21	chr6	-	1187	8	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	33	-43	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	695.556714335461	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTGTCCCTTTTG	NA	False	NA	-15	True	CATAAA	-13	NA	124942220	124935418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.22	chr6	-	2209	7	NNC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	10	-43	intron_retention	FALSE	canonical	3	28	junction_5	709.426685586483	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTGTCCCTTTTG	NA	False	NA	-15	True	CATAAA	-13	NA	124942491	124935418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941749_124941892_124942364
ES.29503.24	chr6	-	1158	8	NNC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	23	-58	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	700.179102451797	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGATTAGATTTGTTGG	NA	False	NA	-30	True	NA	NA	NA	124942452	124935433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941749_124941892_124942364
ES.29503.25	chr6	-	1985	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-15	-58	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	766.816051698748	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGATTAGATTTGTTGG	NA	False	NA	-30	True	NA	NA	NA	124942386	124935433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941749_124941892_124942336
ES.29503.26	chr6	-	1807	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-9	8	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCCTCTTCTGTCTTT	NA	False	NA	-1	True	AATAAA	-34	NA	124942510	124935770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.27	chr6	-	1941	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	17	396	-9	7	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCCTCTTCTGTCTT	NA	False	NA	-2	True	AATAAA	-33	NA	124942484	124935771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.28	chr6	-	2705	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	24	7	intron_retention	FALSE	canonical	3	167	junction_6	606.295032691731	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGCCTCTTCTGTCTT	NA	False	NA	-2	True	AATAAA	-33	NA	124942229	124935771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.29	chr6	-	1790	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	7	5	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	625.701826359972	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGGGCCTCTTCTGTC	NA	False	NA	-4	True	AATAAA	-31	NA	124942468	124935773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ES.29503.3	chr6	-	1593	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	79	-344	-11	344	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTGGTTATAGACAAAT	NA	False	NA	NA	False	NA	NA	NA	124942422	124935031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.30	chr6	-	1719	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAACTGGGCCTCTTCTG	NA	False	NA	-6	True	AATAAA	-29	NA	124942244	124935775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.31	chr6	-	4877	5	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	10	3	intron_retention	FALSE	canonical	3	1332	junction_4	200.286513525	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAACTGGGCCTCTTCTG	NA	False	NA	-6	True	AATAAA	-29	NA	124942401	124935775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124939410_124939584_124941892_124942364
ES.29503.32	chr6	-	2942	6	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	1332	junction_5	196.892457956114	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942495	124935778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.33	chr6	-	3810	5	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	1332	junction_4	218.234392339979	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942402	124935778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.34	chr6	-	2872	6	NIC	ENSMUSG00000030127.16	novel	795	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	167	junction_5	650.049413506389	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942242	124935778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.36	chr6	-	2748	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	26	0	intron_retention	FALSE	canonical	3	38	junction_6	650.359067490157	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942345	124935778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942247
ES.29503.37	chr6	-	2770	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	1123	junction_1	277.297323383324	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942484	124935778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.38	chr6	-	1789	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	23	5	-17	-5	multi-exon	FALSE	canonical	3	38	junction_7	625.057254520393	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942388	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ES.29503.39	chr6	-	1597	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	615.08081433521	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942463	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941836_124941892_124942364
ES.29503.4	chr6	-	2526	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	37	-746	-3	343	multi-exon	FALSE	canonical	3	38	junction_7	625.057254520393	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCTGGTTATAGACAAA	NA	False	NA	NA	False	NA	NA	NA	124942374	124935032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ES.29503.40	chr6	-	1765	9	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	731.3458484192	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942381	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941173_124941274_124941686_124941892_124942364
ES.29503.41	chr6	-	1570	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	644.566951957324	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942491	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
ES.29503.42	chr6	-	1744	6	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	57	junction_5	694.444065422119	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942504	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
ES.29503.43	chr6	-	2608	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-2059	-5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	630.21713135479	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124944560	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124943600
ES.29503.44	chr6	-	1863	9	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	820.046759337539	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942197	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941173_124941306_124941686_124941892_124942114
ES.29503.45	chr6	-	1475	6	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	1	15	junction_5	680.417342518546	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942472	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124942364
ES.29503.46	chr6	-	4932	5	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	25	-5	intron_retention	FALSE	canonical	3	1123	junction_1	249.616080211192	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942450	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124941892_124942364
ES.29503.47	chr6	-	1741	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	626.456441797343	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942463	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936767_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.48	chr6	-	1722	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	30	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	637.324061356288	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCCAGGAACTGGGC	NA	False	NA	-14	True	AATAAA	-21	NA	124942223	124935783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942149
ES.29503.49	chr6	-	1706	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-28	-6	at_least_one_novel_splicesite	FALSE	canonical	1	81	junction_4	588.768067013399	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATGCCAGGAACTGGG	NA	False	NA	-15	True	AATAAA	-20	NA	124942439	124935784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938308_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.5	chr6	-	2210	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-1	16	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGCCTAGAGTGCTCC	NA	False	NA	0	True	ATTAAA	-29	NA	124942502	124935359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.50	chr6	-	1723	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	606.197381474155	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATGCCAGGAACTGG	NA	False	NA	-16	True	AATAAA	-19	NA	124942504	124935785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941749_124941892_124942364
ES.29503.53	chr6	-	1856	9	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	-1539	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	758.616133166175	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATGCCAGGAACTG	NA	False	NA	-17	True	AATAAA	-18	NA	124944040	124935786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124943600_124943719_124943947
ES.29503.54	chr6	-	1870	7	FSM	ENSMUSG00000030127.16	ENSMUST00000129976.8	795	7	5	-1080	5	-11	multi-exon	FALSE	canonical	3	167	junction_6	612.067443633098	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAAAAATGCCAGGAA	NA	False	NA	-20	True	AATAAA	-15	NA	124942248	124935789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ES.29503.55	chr6	-	1950	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	17	-11	intron_retention	FALSE	canonical	3	38	junction_6	659.753341956085	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAAAAATGCCAGGAA	NA	False	NA	-20	True	AATAAA	-15	NA	124942394	124935789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ES.29503.57	chr6	-	1777	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGTACAAAAATGCCAGG	NA	False	NA	-22	True	AATAAA	-13	NA	124942251	124935791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
ES.29503.58	chr6	-	2843	6	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	3	-55	intron_retention	FALSE	canonical	3	1123	junction_1	293.367346512866	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATTGACACATGACA	NA	False	NA	-10	True	NA	NA	NA	124942472	124935833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936601_124936761_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.6	chr6	-	2289	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	28	4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_7	623.446346479611	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGCCAGGAGATTGGC	NA	False	NA	-12	True	ATTAAA	-17	NA	124942343	124935371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942114
ES.29503.61	chr6	-	409	2	ISM	ENSMUSG00000030127.16	ENSMUST00000129976.8	795	7	34	4651	34	-4	5prime_fragment	FALSE	canonical	3	167	junction_1	0	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATAAAGGGTCTGTAAA	NA	False	NA	NA	False	AATAAA	-29	NA	124942219	124941520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_124941892_124942181
ES.29503.7	chr6	-	2309	7	NIC	ENSMUSG00000030127.16	novel	1328	8	NA	NA	22	3	intron_retention	FALSE	canonical	3	1332	junction_6	190.502333027417	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATGCCAGGAGATTGG	NA	False	NA	-13	True	ATTAAA	-16	NA	124942453	124935372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29503.8	chr6	-	2300	7	NIC	ENSMUSG00000030127.16	novel	795	7	NA	NA	-6	2	intron_retention	FALSE	canonical	3	36	junction_6	660.493102832186	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATGCCAGGAGATTG	NA	False	NA	-14	True	ATTAAA	-15	NA	124942417	124935373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ES.29503.9	chr6	-	1343	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	-14	-1	-14	1	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTATGCCAGGAGATT	NA	False	NA	-15	True	ATTAAA	-14	NA	124942515	124935374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ES.29504.1	chr6	+	171	1	Intergenic	novelGene_24476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAACTTTAT	5511	False	NA	NA	False	NA	NA	NA	124944821	124944992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124944800_124945000
ES.29505.1	chr6	+	2699	9	NNC	ENSMUSG00000030329.12	novel	2250	6	NA	NA	-2577	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.4353897568328	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCCTGTTTTGCCTTA	5453	False	NA	18	True	AATAAA	-18	NA	124971079	124980061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124971202_124971417_124971563_124972318_124972416_124973573_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
ES.29505.2	chr6	+	2457	5	NNC	ENSMUSG00000030329.12	novel	2396	5	NA	NA	-53	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	19.5879427199489	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	8145	False	NA	14	True	AATAAA	-14	NA	124973771	124980057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978379
ES.29505.3	chr6	+	3365	4	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	-309	2	-309	-2	intron_retention	FALSE	canonical	0	0	junction_1	22.0957512255687	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	9464	False	NA	14	True	AATAAA	-14	NA	124975090	124980057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124975449_124975880_124975941_124976197_124976704_124977616
ES.29505.4	chr6	+	2022	6	NNC	ENSMUSG00000030329.12	novel	207	3	NA	NA	151	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	15.499677415998	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	NA	False	NA	14	True	AATAAA	-14	NA	124975752	124980057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124975773_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
ES.29505.5	chr6	+	2317	4	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	480	2	278	-2	intron_retention	FALSE	canonical	3	36	junction_1	7.1336448530109	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTAGTTGCCTGTTTTGC	NA	False	NA	14	True	AATAAA	-14	NA	124975879	124980057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124975941_124976197_124976704_124977616_124977699_124978389
ES.29505.6	chr6	+	1998	5	ISM	ENSMUSG00000030329.12	ENSMUST00000162170.8	2053	6	480	7	278	-7	3prime_fragment	FALSE	canonical	3	36	junction_1	6.9462219947249	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAATTTAGTTGCCTGT	NA	False	NA	9	True	AATAAA	-9	NA	124975879	124980052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
ES.29505.7	chr6	+	3043	1	NIC	ENSMUSG00000030329.12	novel	2250	6	NA	NA	385	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAATTTAGTTGCCTGT	NA	False	NA	9	True	AATAAA	-9	NA	124977009	124980052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124977000_124980100
ES.29506.1	chr6	-	178	1	Intergenic	novelGene_24477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATTCCTTTGACCCT	NA	False	NA	NA	False	NA	NA	NA	124972744	124972566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_124972600_124972700
ES.29507.1	chr6	+	201	1	Intergenic	novelGene_24478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCCAGGCAGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	124985216	124985417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_124985200_124985400
ES.29508.1	chr6	+	2754	11	NNC	ENSMUSG00000038346.19	novel	2673	9	NA	NA	-312	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	77.2903616242025	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGATGTTTTATTTT	NA	False	NA	9	True	TATAAA	-21	NA	124985795	125014603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124985905_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.10	chr6	+	3395	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	-257	-6	-164	1	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGCTACTGTGTAA	NA	False	NA	9	True	AATAAA	-20	NA	124985943	125014834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.100	chr6	+	3624	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_6	65.3713239884278	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124986775	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.101	chr6	+	3418	9	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-1109	4	intron_retention	FALSE	canonical	0	0	junction_5	67.4388612003495	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGATGTTTTATTTTT	1964	False	NA	10	True	TATAAA	-22	NA	125000640	125014604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.102	chr6	+	2949	9	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-1107	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	77.4354569948418	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGAGCTACTGTGTA	1966	False	NA	8	True	AATAAA	-19	NA	125000642	125014833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125000713_125000995_125001234_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.103	chr6	+	3227	9	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-1107	1	intron_retention	FALSE	canonical	0	0	junction_4	68.6666540250797	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	1966	False	NA	4	True	AATAAA	-15	NA	125000642	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125000713_125000995_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.104	chr6	+	2880	8	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-756	-464	intron_retention	FALSE	canonical	0	0	junction_4	68.9036594508179	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGTGAGCCATTTTCT	2317	False	NA	NA	False	NA	NA	NA	125000993	125014136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.105	chr6	+	6093	16	Fusion	ENSMUSG00000038346.19_ENSMUSG00000030330.16	novel	3108	11	NA	NA	-626	0	multi-exon	FALSE	non_canonical	0	0	junction_1	67.2763455210423	535	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	2447	False	NA	8	True	AATAAA	-15	NA	125001123	125025965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125001234_125001376_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125010202_125010282_125012675_125012835_125013268_125016861_125020916_125020989_125023866_125024034_125024173_125024277_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.106	chr6	+	2118	5	NNC	ENSMUSG00000038346.19	novel	2470	10	NA	NA	-282	-3	intron_retention	FALSE	canonical	0	0	junction_3	80.2589558865551	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTGTATCGTATT	2791	False	NA	NA	False	ACTAAA	-16	NA	125001467	125009743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125009159
ES.29508.107	chr6	+	4398	4	NIC	ENSMUSG00000038346.19	novel	2673	9	NA	NA	-98	-8	intron_retention	FALSE	canonical	3	127	junction_1	33.436506994601	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATTTTCATATTGA	2975	False	NA	-2	True	TATAAA	-10	NA	125001651	125014592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125002046_125007760_125010282_125012675_125012835_125013268
ES.29508.108	chr6	+	4094	1	NIC	ENSMUSG00000038346.19	novel	1861	8	NA	NA	-2383	210	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATGACTGTTTCCT	2116	False	NA	NA	False	ATTAAA	-16	NA	125004983	125009077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125005000_125009100
ES.29508.109	chr6	+	4685	5	ISM	ENSMUSG00000038346.19	ENSMUST00000112424.2	2673	9	17927	-228	-2085	0	3prime_fragment	FALSE	canonical	3	80	junction_1	54.1063767036751	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGCAGTGAGCTACT	2414	False	NA	3	True	AATAAA	-14	NA	125005281	125014828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.11	chr6	+	3990	11	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-2	intron_retention	FALSE	canonical	0	0	junction_7	62.6083860197658	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	NA	False	NA	4	True	TATAAA	-16	NA	124985943	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.110	chr6	+	4284	3	ISM	ENSMUSG00000038346.19	ENSMUST00000112425.8	2691	10	19001	6	-1667	-6	intron_retention	FALSE	canonical	3	84	junction_1	54.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTCATATTGATG	2832	False	NA	0	True	TATAAA	-12	NA	125005699	125014594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125007986_125010202_125010282_125012675
ES.29508.111	chr6	+	2902	5	ISM	ENSMUSG00000038346.19	ENSMUST00000112424.2	2673	9	19480	2	-532	-2	3prime_fragment	FALSE	canonical	3	80	junction_1	54.1063767036751	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	3967	False	NA	4	True	TATAAA	-16	NA	125006834	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.112	chr6	+	3974	4	ISM	ENSMUSG00000038346.19	ENSMUST00000046064.17	3108	11	21022	-1839	287	1839	3prime_fragment	FALSE	canonical	3	84	junction_1	53.6304225437598	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTTTCCGGCGGATGT	4786	False	NA	NA	False	NA	NA	NA	125007653	125016672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.113	chr6	+	4004	1	NIC	ENSMUSG00000038346.19	novel	2451	9	NA	NA	3228	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	903	False	NA	4	True	TATAAA	-16	NA	125010594	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125010600_125014600
ES.29508.114	chr6	+	3080	1	Genic_Genomic	ENSMUSG00000108037.3_ENSMUSG00000030330.16	novel	NA	NA	NA	NA	-20	-3366	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAAACAAACAAAAGCA	7011	False	NA	NA	False	NA	NA	NA	125016702	125019782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_125016700_125019800
ES.29508.115	chr6	+	1450	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	-85	264	-9	-2	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGCTGTGTTTATTGT	7022	False	NA	6	True	AATAAA	-13	NA	125016713	125025963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.116	chr6	+	1909	7	NNC	ENSMUSG00000030330.16	novel	1446	8	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_4	53.6109959699397	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGCGGTGATAGTA	7025	False	NA	8	True	AATAAA	-18	NA	125016716	125026229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024277_125024441_125024904_125025138_125025201_125025330
ES.29508.117	chr6	+	1538	8	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	45.7571227866688	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7089	False	NA	6	True	AATAAA	-16	NA	125016780	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024864_125024904_125025138_125025201_125025330
ES.29508.118	chr6	+	1208	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTTTATTGTA	7098	False	NA	7	True	AATAAA	-14	NA	125016789	125025964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.119	chr6	+	1453	7	NNC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.7272414547873	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7107	False	NA	6	True	AATAAA	-16	NA	125016798	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125016861_125020916_125020989_125024173_125024277_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.12	chr6	+	3045	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	-2	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985943	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.121	chr6	+	1462	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7107	False	NA	6	True	AATAAA	-16	NA	125016798	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.122	chr6	+	1833	7	ISM	ENSMUSG00000108037.3	ENSMUST00000140883.7	3181	10	-8	2235	-8	-2235	5prime_fragment	FALSE	canonical	3	91	junction_4	20.4857674170793	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7108	False	NA	6	True	AATAAA	-16	NA	125016799	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330
ES.29508.123	chr6	+	1403	6	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	33	junction_2	44.0336235165811	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTTTATTGTA	7108	False	NA	7	True	AATAAA	-14	NA	125016799	125025964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024904_125025138_125025201_125025330
ES.29508.124	chr6	+	1638	5	NIC	ENSMUSG00000030330.16	novel	1383	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	33	junction_2	46.8241390737726	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTTTATTGTA	7108	False	NA	7	True	AATAAA	-14	NA	125016799	125025964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125025201_125025330
ES.29508.127	chr6	+	3550	12	NIC	ENSMUSG00000108037.3	novel	3181	10	NA	NA	-7	2653	combination_of_known_splicesites	FALSE	canonical	3	86	junction_11	21.6306333129814	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGTCGTTGTTCTTTG	7109	False	NA	18	True	ACTAAA	-25	NA	125016800	125031158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
ES.29508.128	chr6	+	1624	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	7	-2	-5	1	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGCGGTGATAGTA	7114	False	NA	8	True	AATAAA	-18	NA	125016805	125026229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.129	chr6	+	1966	6	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	91	junction_3	22.3928560036454	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7115	False	NA	6	True	AATAAA	-16	NA	125016806	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125023866_125024289_125024444_125024904_125025138_125025201_125025330
ES.29508.13	chr6	+	3301	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGAGCTACTGTGTA	NA	False	NA	8	True	AATAAA	-19	NA	124985943	125014833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.130	chr6	+	1182	7	NNC	ENSMUSG00000030330.16	novel	1446	8	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.7272414547873	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTTTATTGTA	7115	False	NA	7	True	AATAAA	-14	NA	125016806	125025964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125016861_125020916_125020989_125024173_125024277_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ES.29508.131	chr6	+	1336	7	NNC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.4739396104262	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7115	False	NA	6	True	AATAAA	-16	NA	125016806	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125016861_125020916_125020989_125024173_125024277_125024441_125024551_125024864_125024904_125025138_125025201_125025330
ES.29508.132	chr6	+	1890	5	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_2	46.8241390737726	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7119	False	NA	6	True	AATAAA	-16	NA	125016810	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125025201_125025330
ES.29508.133	chr6	+	4125	10	NIC	ENSMUSG00000108037.3	novel	3181	10	NA	NA	3	2652	intron_retention	FALSE	canonical	3	86	junction_9	23.6319515868341	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	7119	False	NA	17	True	ACTAAA	-24	NA	125016810	125031157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330_125027613_125027809_125027905_125028205_125028324_125030452
ES.29508.134	chr6	+	1648	6	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	63.1240049426524	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7120	False	NA	6	True	AATAAA	-16	NA	125016811	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125016861_125020916_125020989_125024173_125024280_125024441_125024904_125025138_125025201_125025330
ES.29508.135	chr6	+	1880	5	NNC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	65.8535306570574	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7120	False	NA	6	True	AATAAA	-16	NA	125016811	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125016861_125020916_125020989_125024173_125024277_125024441_125025201_125025330
ES.29508.136	chr6	+	2949	2	FSM	ENSMUSG00000030330.16	ENSMUST00000146229.2	849	2	-1454	-646	664	0	multi-exon	FALSE	canonical	3	150	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	NA	False	NA	6	True	AATAAA	-16	NA	125023148	125026227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125025201_125025330
ES.29508.137	chr6	+	4762	5	Fusion	ENSMUSG00000030330.16_ENSMUSG00000072770.10	novel	1498	5	NA	NA	-965	0	intron_retention	FALSE	canonical	3	86	junction_4	23.5849528301415	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTTGTCGTTGTTCTT	NA	False	NA	16	True	ACTAAA	-23	NA	125023637	125031156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125025201_125025330_125027613_125027809_125027905_125028205_125028324_125030452
ES.29508.138	chr6	+	1834	4	NIC	ENSMUSG00000030330.16	novel	1383	7	NA	NA	-636	-1	intron_retention	FALSE	canonical	3	91	junction_2	24.589970855344	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTGTGCGGTGATA	NA	False	NA	5	True	AATAAA	-15	NA	125023966	125026226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125024034_125024173_125024289_125024444_125025201_125025330
ES.29508.139	chr6	+	3236	9	NNC	ENSMUSG00000072770.10	novel	1883	10	NA	NA	-46	0	intron_retention	FALSE	canonical	1	1	junction_8	47.7072780087064	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	125026863	125040230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125039596_125039898
ES.29508.14	chr6	+	4458	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	1157	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTATGGGGTCTAACT	NA	False	NA	NA	False	TATAAA	-19	NA	124985943	125015990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.140	chr6	+	1849	9	NIC	ENSMUSG00000072770.10	novel	1883	10	NA	NA	-39	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	47.7072780087064	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACGTGCTCTGCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	125026870	125040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039898
ES.29508.141	chr6	+	3508	8	ISM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	-28	1	-16	-1	intron_retention	FALSE	canonical	3	11	junction_5	45.4276729470898	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACGTGCTCTGCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	125026893	125040229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048
ES.29508.142	chr6	+	1136	4	NIC	ENSMUSG00000072770.10	novel	1498	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	51.6978400580398	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTTGTCGTTGTTCTT	NA	False	NA	16	True	ACTAAA	-23	NA	125026894	125031156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125027016_125027396_125027613_125027809_125027905_125030452
ES.29508.143	chr6	+	3548	4	Fusion	ENSMUSG00000067714.14_ENSMUSG00000072770.10_ENSMUSG00000107761.2	novel	1393	2	NA	NA	-2026	154	multi-exon	FALSE	canonical	0	0	junction_1	9.89949493661167	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGATTCCTCAAAGAGCC	NA	False	NA	NA	False	NA	NA	NA	125037125	125061146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125037279_125037772_125037953_125038048_125038217_125058099
ES.29508.144	chr6	+	3311	3	Fusion	ENSMUSG00000067714.14_ENSMUSG00000072770.10_ENSMUSG00000107761.2	novel	1883	10	NA	NA	-1434	15	multi-exon	FALSE	canonical	0	0	junction_2	10.5	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCACACATTCCATTTAT	NA	False	NA	NA	False	NA	NA	NA	125037717	125061007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125037953_125038048_125038217_125058099
ES.29508.145	chr6	+	3252	2	FSM	ENSMUSG00000067714.14_ENSMUSG00000107761.2	ENSMUST00000088292.7	1393	2	-291	-1568	-291	11	multi-exon	FALSE	canonical	2	17	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAGCACACATTCCAT	4747	False	NA	NA	False	NA	NA	NA	125044591	125061003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125044940_125058099
ES.29508.146	chr6	+	2600	2	FSM	ENSMUSG00000067714.14_ENSMUSG00000107761.2	ENSMUST00000088292.7	1393	2	-226	-981	-226	-576	multi-exon	FALSE	canonical	2	17	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTCTTTTTGTTGTC	4812	False	NA	9	True	NA	NA	NA	125044656	125060416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125044940_125058099
ES.29508.147	chr6	+	1870	3	NNC	ENSMUSG00000067714.14	novel	1393	2	NA	NA	2	388	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCCCGCACATGCTGGG	5040	False	NA	NA	False	AATAAA	-30	NA	125044884	125059823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125044940_125045239_125045331_125058099
ES.29508.148	chr6	+	5132	3	Fusion	ENSMUSG00000067714.14_ENSMUSG00000107761.2	novel	1393	2	NA	NA	2	2093	multi-exon	FALSE	canonical	2	4	junction_1	4	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCAGATCTTGTGAAGT	5040	False	NA	NA	False	NA	NA	NA	125044884	125063085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125044940_125045239_125045331_125058099
ES.29508.149	chr6	+	5042	2	FSM	ENSMUSG00000067714.14_ENSMUSG00000107761.2	ENSMUST00000088292.7	1393	2	2	-3651	2	2094	multi-exon	FALSE	canonical	2	17	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGATCTTGTGAAGTA	5040	False	NA	NA	False	NA	NA	NA	125044884	125063086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125044940_125058099
ES.29508.15	chr6	+	3093	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.436131774315	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGATGTTTTATTTT	NA	False	NA	9	True	TATAAA	-21	NA	124985943	125014603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.150	chr6	+	3028	3	Fusion	ENSMUSG00000067714.14_ENSMUSG00000107761.2	novel	1393	2	NA	NA	19	6	multi-exon	FALSE	canonical	2	4	junction_1	4	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATACAGAAGCACACAT	5057	False	NA	NA	False	NA	NA	NA	125044901	125060998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125044940_125045239_125045331_125058099
ES.29508.151	chr6	+	5392	2	Fusion	ENSMUSG00000067714.14_ENSMUSG00000107761.2	novel	1393	2	NA	NA	49	2100	multi-exon	FALSE	canonical	3	12	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGTGAAGTACTTAGT	5087	False	NA	NA	False	NA	NA	NA	125044931	125063092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125045331_125058099
ES.29508.152	chr6	+	2708	2	Fusion	ENSMUSG00000067714.14_ENSMUSG00000107761.2	novel	1393	2	NA	NA	50	-583	multi-exon	FALSE	canonical	3	12	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGACTTTGGTCTTTT	5088	False	NA	2	True	NA	NA	NA	125044932	125060409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125045331_125058099
ES.29508.153	chr6	+	3299	2	Fusion	ENSMUSG00000067714.14_ENSMUSG00000107761.2	novel	1393	2	NA	NA	50	8	multi-exon	FALSE	canonical	3	12	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGAAGCACACATTC	5088	False	NA	NA	False	NA	NA	NA	125044932	125061000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_125045331_125058099
ES.29508.154	chr6	+	3077	2	FSM	ENSMUSG00000067714.14_ENSMUSG00000107761.2	ENSMUST00000171989.3	1458	2	-50	-1569	-50	12	multi-exon	FALSE	canonical	1	2	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGCACACATTCCATT	8345	False	NA	NA	False	NA	NA	NA	125048189	125061004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125048362_125058099
ES.29508.155	chr6	+	4750	1	FSM	ENSMUSG00000107761.2	ENSMUST00000203956.2	593	1	-4736	579	-4736	-579	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTTGGTCTTTTTGTT	5684	False	NA	6	True	NA	NA	NA	125055663	125060413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125055700_125060400
ES.29508.16	chr6	+	3157	12	NNC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	89.6729595219288	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124985943	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001804_125002046_125002266_125002384_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.17	chr6	+	3439	8	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-163	-3	intron_retention	FALSE	canonical	0	0	junction_4	80.0907648374324	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCACTGTATCGTATT	NA	False	NA	NA	False	ACTAAA	-16	NA	124985944	125009743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001376_125001516_125001708_125002046_125002810_125002904_125007760
ES.29508.18	chr6	+	3663	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-163	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	72.94252237377	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124985944	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001376_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.19	chr6	+	2910	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-163	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGATGTTTTATTTTT	NA	False	NA	10	True	TATAAA	-22	NA	124985944	125014604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.2	chr6	+	3871	11	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-4	intron_retention	FALSE	canonical	0	0	junction_5	75.5605717289116	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985943	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001825_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.20	chr6	+	3554	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-143	0	intron_retention	FALSE	canonical	0	0	junction_6	65.6564195802571	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGGTGTTTTTAGACCA	NA	False	NA	-45	True	TATAAA	-33	NA	124985964	125014780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.22	chr6	+	3222	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-276	126	-138	-3	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTCATATTGATGTTT	NA	False	NA	3	True	TATAAA	-15	NA	124985969	125014597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.23	chr6	+	4032	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-138	3	intron_retention	FALSE	canonical	0	0	junction_7	66.4699024663366	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGATGTTTTATTTT	NA	False	NA	9	True	TATAAA	-21	NA	124985969	125014603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.24	chr6	+	3294	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-137	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.436131774315	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124985970	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.25	chr6	+	2005	9	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-134	210	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	66.768138921195	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGATGACTGTTTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	124985973	125009077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633
ES.29508.26	chr6	+	3038	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124985973	125014600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.27	chr6	+	3927	12	NNC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-134	-4	intron_retention	FALSE	canonical	0	0	junction_9	81.3392040513213	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAAGGGGTGTTTTTAG	NA	False	NA	-49	True	TATAAA	-29	NA	124985973	125014776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001804_125002046_125003219_125003283_125007760_125007986_125008633_125008817_125009063_125009193_125010202_125010282_125012675
ES.29508.28	chr6	+	4272	7	ISM	ENSMUSG00000038346.19	ENSMUST00000145138.8	3603	12	-215	8506	-133	-2773	5prime_fragment	FALSE	canonical	3	49	junction_1	55.2288169547585	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCATGGGTGCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	124985974	125006094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810
ES.29508.29	chr6	+	3766	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-133	750	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCAAATGTTCTCCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	124985974	125015583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.3	chr6	+	2969	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	76.9406769439614	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985943	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001825_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.30	chr6	+	3640	11	NNC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-132	281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.7829136415327	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACGACTTTGCTCAGGA	NA	False	NA	NA	False	NA	NA	NA	124985975	125015114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001470_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.31	chr6	+	4448	11	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-126	-2	intron_retention	FALSE	canonical	3	49	junction_6	55.7297945447496	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	NA	False	NA	4	True	TATAAA	-16	NA	124985981	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.32	chr6	+	7848	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-119	-2	intron_retention	FALSE	canonical	0	0	junction_6	66.285204948478	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	NA	False	NA	4	True	TATAAA	-16	NA	124985988	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125002046_125002810_125002904_125003219_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.33	chr6	+	3266	12	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-118	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	63.0877651823432	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATATTGATGTTTT	NA	False	NA	4	True	TATAAA	-16	NA	124985989	125014598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125003219_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.34	chr6	+	3282	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-118	281	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACGACTTTGCTCAGGA	NA	False	NA	NA	False	NA	NA	NA	124985989	125015114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.35	chr6	+	2947	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-118	-4	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.9912720347511	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985989	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.36	chr6	+	2647	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-118	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	72.4170023007182	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985989	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001825_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.37	chr6	+	3436	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-255	-109	-117	-1	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124985990	125014832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.38	chr6	+	3354	13	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-117	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	65.8677125423037	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTCATATTGATG	NA	False	NA	0	True	TATAAA	-12	NA	124985990	125014594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.39	chr6	+	3173	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.5808667724749	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124985994	125014600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.41	chr6	+	3370	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	282	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGACTTTGCTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	124985995	125015115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.42	chr6	+	3173	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.9912720347511	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGCAGTGAGCTACT	NA	False	NA	3	True	AATAAA	-14	NA	124985995	125014828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.43	chr6	+	2140	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	652	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.9912720347511	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGGTCTCAGGCATGG	NA	False	NA	NA	False	NA	NA	NA	124985995	125013795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.44	chr6	+	3551	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-111	281	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.436131774315	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACGACTTTGCTCAGGA	NA	False	NA	NA	False	NA	NA	NA	124985996	125015114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.45	chr6	+	3344	13	NNC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-111	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	73.540757784752	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124985996	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987398_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.46	chr6	+	2470	12	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-111	636	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGTCTCCAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	124985996	125013779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.47	chr6	+	2729	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-249	592	-111	-469	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGACCCCTGTGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	124985996	125014131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.5	chr6	+	4221	11	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	1	intron_retention	FALSE	canonical	0	0	junction_7	62.6083860197658	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124985943	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.50	chr6	+	3730	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-249	-409	-111	299	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGAGGTGGTTGGATC	NA	False	NA	NA	False	NA	NA	NA	124985996	125015132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.51	chr6	+	9794	8	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-106	4	intron_retention	FALSE	canonical	3	101	junction_5	39.9800970892431	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGATGTTTTATTTTT	NA	False	NA	10	True	TATAAA	-22	NA	124986001	125014604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001516_125001708_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.52	chr6	+	1652	7	NNC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-106	1471	intron_retention	FALSE	canonical	1	4	junction_2	79.8721200141548	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGTTGTGTAGATAC	NA	False	NA	NA	False	NA	NA	NA	124986001	125003347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000645_125000713_125000995_125001234_125001467_125001516_125001804_125002046_125002810
ES.29508.53	chr6	+	2797	10	NNC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-106	216	intron_retention	FALSE	canonical	0	0	junction_7	84.6430413232207	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTGTTTCCTTCGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	124986001	125009083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125006786_125006890_125007760
ES.29508.54	chr6	+	4915	11	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-104	750	intron_retention	FALSE	canonical	0	0	junction_7	62.6083860197658	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCAAATGTTCTCCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	124986003	125015583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.55	chr6	+	1718	9	ISM	ENSMUSG00000038346.19	ENSMUST00000145138.8	3603	12	-184	5524	-102	209	5prime_fragment	FALSE	canonical	0	0	junction_7	72.688977843962	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGATGACTGTTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	124986005	125009076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633
ES.29508.56	chr6	+	2651	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-101	-4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	71.3677660060293	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	False	NA	2	True	TATAAA	-14	NA	124986006	125014596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001804_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.57	chr6	+	2876	11	NNC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-101	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63.9956248504536	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124986006	125014832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986040_124986400_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.6	chr6	+	3355	12	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-164	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTATTTTTGTCTTAT	NA	False	NA	17	True	TATAAA	-29	NA	124985943	125014611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.60	chr6	+	2982	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-98	18	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAAAGCAATTTAAAAAT	NA	False	NA	-84	True	GATAAA	-23	NA	124986009	125014741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.62	chr6	+	3142	12	NNC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-60	1839	intron_retention	FALSE	canonical	0	0	junction_11	72.2671810336162	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTTTCCGGCGGATGT	NA	False	NA	NA	False	NA	NA	NA	124986047	125016672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125003283_125007760_125007986_125010202_125010282_125012675_125012835_125013268_125014539_125016650
ES.29508.63	chr6	+	2875	9	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	66.1055027966659	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGATGTTTTATTTT	NA	False	NA	9	True	TATAAA	-21	NA	124986091	125014603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.64	chr6	+	3236	13	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.0231608509324	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124986091	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.66	chr6	+	2739	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	77.2851062904166	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124986200	125014600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001825_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.69	chr6	+	2906	12	NNC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	0	55599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	74.6175925902661	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAATAAGCGAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	124986200	125070432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268_125014550_125019746_125019811_125070350
ES.29508.7	chr6	+	3576	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-164	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124985943	125014832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.70	chr6	+	2101	10	NNC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	79.4617696726305	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCACTGTATCGTATTC	NA	False	NA	NA	False	ACTAAA	-17	NA	124986203	125009744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001466_125001516_125001708_125002046_125002810_125002905_125007760_125007986_125008633_125008817_125009159
ES.29508.71	chr6	+	3314	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	10	280	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACGACTTTGCTCAGG	NA	False	NA	NA	False	NA	NA	NA	124986210	125015113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.72	chr6	+	2175	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	-34	931	11	649	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTTGGGTCTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	124986211	125013792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.75	chr6	+	3456	8	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	11	1	intron_retention	FALSE	canonical	3	84	junction_5	45.5362605009257	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124986211	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.76	chr6	+	3076	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	-11	6	intron_retention	FALSE	canonical	0	0	junction_6	66.285204948478	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGTTTTATTTTTGT	NA	False	NA	12	True	TATAAA	-24	NA	124986227	125014606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.77	chr6	+	3015	11	NIC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	63.4278330072847	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAAGGGGTGTTTTTAG	NA	False	NA	-49	True	TATAAA	-29	NA	124986259	125014776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001804_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.8	chr6	+	2818	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	4	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGATGTTTTATTTTT	NA	False	NA	10	True	TATAAA	-22	NA	124985943	125014604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.80	chr6	+	3960	12	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	24	-2	intron_retention	FALSE	canonical	0	0	junction_7	66.4699024663366	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124986269	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.81	chr6	+	2584	7	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	25	204	intron_retention	FALSE	canonical	0	0	junction_6	69.5796905234087	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGGAACAAAGATGACTG	NA	False	NA	NA	False	ATTAAA	-10	NA	124986270	125009071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001516_125001708_125002046_125002810_125002904_125007760
ES.29508.82	chr6	+	3072	11	NNC	ENSMUSG00000038346.19	novel	3072	11	NA	NA	-176	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2335036618454	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCAGTGAGCTACTGT	NA	False	NA	5	True	AATAAA	-16	NA	124986455	125014830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986566_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.83	chr6	+	2973	11	NNC	ENSMUSG00000038346.19	novel	2673	9	NA	NA	-166	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.9899993588922	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124986465	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124986566_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.84	chr6	+	3509	10	ISM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	315	129	-71	-6	3prime_fragment	FALSE	canonical	3	80	junction_6	45.1108374375935	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTCATATTGATG	NA	False	NA	0	True	TATAAA	-12	NA	124986560	125014594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.85	chr6	+	3351	12	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-61	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	74.0850527523759	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124986570	125014832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.86	chr6	+	3528	9	NIC	ENSMUSG00000038346.19	novel	2691	10	NA	NA	-38	1	intron_retention	FALSE	canonical	3	84	junction_6	40.4845649599943	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124986593	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.87	chr6	+	3604	12	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-31	282	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	74.0850527523759	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGACTTTGCTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	124986600	125015115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.88	chr6	+	3088	12	NIC	ENSMUSG00000038346.19	novel	2829	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	74.0850527523759	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124986601	125014600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.89	chr6	+	2803	10	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-18	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	64.2612338259974	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGATGTTTTATTTT	NA	False	NA	9	True	TATAAA	-21	NA	124986613	125014603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.9	chr6	+	3168	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	-257	221	-164	7	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATGTTTTATTTTTGTC	NA	False	NA	13	True	TATAAA	-25	NA	124985943	125014607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.90	chr6	+	3458	11	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_6	77.5422465498647	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGAGCTACTGTG	NA	False	NA	6	True	AATAAA	-17	NA	124986625	125014831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.91	chr6	+	3257	12	NIC	ENSMUSG00000038346.19	novel	2829	11	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	73.622445373744	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCAGTGAGCTACTG	NA	False	NA	4	True	AATAAA	-15	NA	124986631	125014829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125003219_125003283_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.92	chr6	+	2867	11	FSM	ENSMUSG00000038346.19	ENSMUST00000046064.17	3108	11	2	239	2	-6	multi-exon	FALSE	canonical	0	0	junction_7	76.603133095194	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTCATATTGATG	NA	False	NA	0	True	TATAAA	-12	NA	124986633	125014594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.93	chr6	+	3190	11	FSM	ENSMUSG00000038346.19	ENSMUST00000084275.12	2829	11	-133	-228	3	0	multi-exon	FALSE	canonical	3	8	junction_1	63.4417055256241	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGCAGTGAGCTACT	NA	False	NA	3	True	AATAAA	-14	NA	124986634	125014828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.94	chr6	+	3705	11	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	5	4	intron_retention	FALSE	canonical	0	0	junction_7	75.5585203666668	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGATGTTTTATTTTT	NA	False	NA	10	True	TATAAA	-22	NA	124986636	125014604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.95	chr6	+	3058	11	NIC	ENSMUSG00000038346.19	novel	2829	11	NA	NA	20	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	75.7110295795797	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCAGTGAGCTACTGT	NA	False	NA	5	True	AATAAA	-16	NA	124986651	125014830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001825_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ES.29508.96	chr6	+	2845	8	NNC	ENSMUSG00000038346.19	novel	2470	10	NA	NA	20	2	intron_retention	FALSE	canonical	1	4	junction_1	78.8646476760102	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTATCGTATTCTTTG	NA	False	NA	NA	False	ACTAAA	-21	NA	124986651	125009748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_124987404_125000645_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125003219_125003283_125007760_125007986_125008633
ES.29508.97	chr6	+	3066	10	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	78.2178029054641	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAGGCAGTGAGCTAC	NA	False	NA	2	True	AATAAA	-13	NA	124986665	125014827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001376_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29508.98	chr6	+	5353	11	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_7	79.743902588223	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAGTGAGCTACTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	124986665	125014832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125003219_125003283_125007760_125010282_125012675_125012835_125013268
ES.29508.99	chr6	+	2923	10	NIC	ENSMUSG00000038346.19	novel	3108	11	NA	NA	-9	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	64.2612338259974	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAAGGGGTGTTTTTAG	NA	False	NA	-49	True	TATAAA	-29	NA	124986666	125014776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ES.29509.1	chr6	-	871	1	Antisense	novelGene_ENSMUSG00000030330.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGCTTCACAGCCTAG	NA	False	NA	NA	False	NA	NA	NA	125023237	125022366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_125022400_125023200
ES.2951.1	chr10	+	2732	11	NNC	ENSMUSG00000020072.16	novel	2212	10	NA	NA	-263	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.6	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAATTTGGTGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	62859830	62894591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62860516_62872335_62872397_62874867_62875012_62883246_62883347_62883720_62883820_62887979_62888090_62888207_62888238_62889642_62889732_62890105_62890285_62892557_62892621_62893419
ES.2951.2	chr10	+	1960	1	Genic_Genomic	ENSMUSG00000020072.16	novel	NA	NA	NA	NA	-83	-26070	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGCTCCTTCCTCACC	NA	False	NA	NA	False	NA	NA	NA	62860010	62861970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_62860000_62862000
ES.2951.3	chr10	+	3519	1	Intergenic	novelGene_2300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTTTGTCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	62861814	62865333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62861800_62865300
ES.2951.4	chr10	+	1512	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	19	-684	19	-1	multi-exon	FALSE	canonical	2	8	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAATTTGGTGAAAT	4348	False	NA	NA	False	AATAAA	-15	NA	62890007	62894591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62890285_62892557_62892621_62893419
ES.2951.5	chr10	+	2572	13	Fusion	ENSMUSG00000020072.16_ENSMUSG00000112129.2	novel	2404	9	NA	NA	131	-48	multi-exon	TRUE	non_canonical	0	0	junction_2	2.4438130497692	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGATGTCATCTGT	4460	False	NA	NA	False	NA	NA	NA	62890119	62913693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_62890285_62892557_62892621_62897075_62897246_62897336_62897481_62901562_62901663_62902303_62902403_62903207_62903318_62903436_62903467_62907185_62907275_62907647_62907827_62910839_62910903_62912127_62913125_62913330
ES.2951.6	chr10	+	819	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	151	-123	151	123	multi-exon	FALSE	canonical	2	8	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAATTGTGTGTGTGTGT	4480	False	NA	NA	False	NA	NA	NA	62890139	62894030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_62890285_62892557_62892621_62893419
ES.2951.7	chr10	+	3413	7	Fusion	ENSMUSG00000020072.16_ENSMUSG00000112129.2	novel	2212	10	NA	NA	151	-1004	multi-exon	FALSE	canonical	0	0	junction_3	4.45969605341988	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGCCTTCTGGATGAA	4480	False	NA	NA	False	AATATA	-22	NA	62890139	62898903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_62890285_62892557_62892621_62893419_62893672_62895256_62896321_62896451_62896604_62897075_62897246_62897336
ES.2951.8	chr10	+	2259	10	NNC	ENSMUSG00000112129.2	novel	2404	9	NA	NA	-109	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1.9309052441092	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTGGATGTCATCTGT	1485	False	NA	NA	False	NA	NA	NA	62897251	62913693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_62897481_62901562_62901663_62902303_62902403_62903207_62903318_62903436_62903467_62907185_62907275_62907647_62907827_62910839_62910903_62912127_62913125_62913330
ES.29510.1	chr6	-	183	1	Intergenic	novelGene_24479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTGCCTTAGTCATGG	8845	False	NA	NA	False	NA	NA	NA	125041005	125040822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125040800_125041000
ES.29511.1	chr6	-	212	1	Intergenic	novelGene_24480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAATTCATTAATTTGAG	7216	False	NA	NA	False	NA	NA	NA	125042634	125042422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125042400_125042600
ES.29512.1	chr6	+	6642	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	17	-7	17	1	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGGTTCTGTGTGGGT	1625	False	NA	15	True	AATAAA	-19	NA	125072960	125107555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.10	chr6	+	6692	38	NNC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	-68	-1	intron_retention	FALSE	canonical	0	0	junction_33	128.708775410951	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	1721	False	NA	13	True	AATAAA	-17	NA	125073056	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099516_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.13	chr6	+	6164	37	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	125.02610838452	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1727	False	NA	14	True	AATAAA	-18	NA	125073062	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.18	chr6	+	6612	38	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-51	0	intron_retention	FALSE	canonical	3	85	junction_8	112.570406505196	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1738	False	NA	14	True	AATAAA	-18	NA	125073073	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.2	chr6	+	6664	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	34	-1	34	1	multi-exon	FALSE	canonical	3	138	junction_8	108.606041087339	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGGTTCTGTGTGGGT	1642	False	NA	15	True	AATAAA	-19	NA	125072977	125107555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.22	chr6	+	6501	39	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	122.54448285014	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1745	False	NA	14	True	AATAAA	-18	NA	125073080	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100322_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.25	chr6	+	5911	37	NIC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	-35	-1511	intron_retention	FALSE	canonical	3	85	junction_8	111.495335671692	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCCGAGCCTGTGTG	1754	False	NA	15	True	CATAAA	-16	NA	125073089	125106037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.3	chr6	+	6681	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	-144	0	37	0	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1645	False	NA	14	True	AATAAA	-18	NA	125072980	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.31	chr6	+	5980	39	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	-24	-1514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	133.810042313059	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTGCCGAGCCTGT	1765	False	NA	12	True	CATAAA	-13	NA	125073100	125106034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125094819_125094987_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.32	chr6	+	5876	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	-24	1517	-24	-1511	5prime_fragment	FALSE	canonical	3	54	junction_3	115.301098504261	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCCGAGCCTGTGTG	1765	False	NA	15	True	CATAAA	-16	NA	125073100	125106037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.33	chr6	+	6289	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	157	251	-24	-245	multi-exon	FALSE	canonical	3	138	junction_8	108.606041087339	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTTATTTTGTTG	1765	False	NA	20	True	AAGAAA	-21	NA	125073100	125107303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.34	chr6	+	3803	23	NNC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	-24	-3261	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	92.2311258660133	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTTTGGAGTCTTTG	1765	False	NA	NA	False	NA	NA	NA	125073100	125088323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125088062
ES.29512.35	chr6	+	6598	38	NIC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	54	junction_3	120.03196555016	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	1772	False	NA	13	True	AATAAA	-17	NA	125073107	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.37	chr6	+	6485	40	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	120.792000684328	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1775	False	NA	14	True	AATAAA	-18	NA	125073110	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782_125107096_125107140
ES.29512.4	chr6	+	5970	38	ISM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	45	1514	45	-1508	5prime_fragment	FALSE	canonical	3	138	junction_8	107.532535379224	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCGAGCCTGTGTGGAA	1653	False	NA	18	True	CATAAA	-19	NA	125072988	125106040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.44	chr6	+	4026	23	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	157.602675439807	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGATCTGGTTCTGTGTG	1808	False	NA	12	True	AATAAA	-16	NA	125073143	125107552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079911_125097199_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.45	chr6	+	6713	37	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	4	-65	intron_retention	FALSE	canonical	3	138	junction_8	109.912545903157	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACCAAAAGCATAAAAAAC	1808	False	NA	-57	True	AATAAA	-27	NA	125073143	125107483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.47	chr6	+	6419	39	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	5	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	121.876183139367	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACCAAAAGCATAAAAAAC	1809	False	NA	-57	True	AATAAA	-27	NA	125073144	125107483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098484_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.49	chr6	+	6185	38	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	14	-1111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	129.263390428947	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAAATGGAG	1818	False	NA	NA	False	NA	NA	NA	125073153	125106437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090441_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.5	chr6	+	6631	39	NIC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	119.03378323504	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1656	False	NA	14	True	AATAAA	-18	NA	125072991	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.50	chr6	+	6311	38	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	18	-250	intron_retention	FALSE	canonical	3	138	junction_8	109.498624958429	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTTTTGGTTTTATTT	1822	False	NA	15	True	AAGAAA	-16	NA	125073157	125107298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.51	chr6	+	6174	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	219	259	23	-259	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTCTTCCTCTTTTTG	1827	False	NA	6	True	AAGAAA	-7	NA	125073162	125107289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.52	chr6	+	6111	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	230	1143	34	-1143	5prime_fragment	FALSE	canonical	3	85	junction_8	110.633014911068	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1838	False	NA	NA	False	NA	NA	NA	125073173	125106405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.53	chr6	+	5845	38	NNC	ENSMUSG00000063870.13	novel	1332	9	NA	NA	-95	-1514	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	134.012537163034	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTGCCGAGCCTGT	2101	False	NA	12	True	CATAAA	-13	NA	125073436	125106034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073535_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.54	chr6	+	6461	39	NNC	ENSMUSG00000063870.13	novel	1332	9	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	134.760249303137	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	2172	False	NA	13	True	AATAAA	-17	NA	125073507	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073535_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.55	chr6	+	6348	39	NNC	ENSMUSG00000063870.13	novel	1332	9	NA	NA	-22	-88	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	119.744132224573	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAAGAA	2174	False	NA	-80	True	AATAAA	-4	NA	125073509	125107460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073535_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.57	chr6	+	6899	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	393	71	-14	-65	3prime_fragment	FALSE	canonical	3	54	junction_2	115.210418224632	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACCAAAAGCATAAAAAAC	2182	False	NA	-57	True	AATAAA	-27	NA	125073517	125107483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.58	chr6	+	6894	38	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	116.656025115565	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	2189	False	NA	13	True	AATAAA	-17	NA	125073524	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079441_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.59	chr6	+	6929	38	ISM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	594	0	6	0	3prime_fragment	FALSE	canonical	3	138	junction_7	107.145048222752	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	2202	False	NA	14	True	AATAAA	-18	NA	125073537	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.60	chr6	+	6049	33	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.384398238016	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGATCTGGTTCT	2210	False	NA	7	True	AATAAA	-11	NA	125073545	125107547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125074229_125079181_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.61	chr6	+	6688	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	780	10	192	-10	3prime_fragment	FALSE	canonical	3	85	junction_7	110.358907142482	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTGTATTTTAGTGA	2388	False	NA	-2	True	AATAAA	-2	NA	125073723	125107538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.64	chr6	+	5838	36	NIC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	520	-1508	intron_retention	FALSE	canonical	3	54	junction_2	115.341714138503	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCGAGCCTGTGTGGAA	2716	False	NA	18	True	CATAAA	-19	NA	125074051	125106040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.67	chr6	+	5850	35	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	4614	1121	4207	-1115	internal_fragment	FALSE	canonical	3	138	junction_5	102.60233308422	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAT	6403	False	NA	NA	False	NA	NA	NA	125077738	125106433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.68	chr6	+	3338	21	NNC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	4228	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	89.550544386955	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	6424	False	NA	8	True	AATAAA	-12	NA	125077759	125107548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090509_125107390
ES.29512.69	chr6	+	5455	33	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	5311	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	119.31312205181	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACCAAAAGCATAAAAAAC	7507	False	NA	-57	True	AATAAA	-27	NA	125078842	125107483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105954_125106782
ES.29512.7	chr6	+	5894	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	79	1511	79	-1511	5prime_fragment	FALSE	canonical	3	85	junction_8	110.633014911068	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCCGAGCCTGTGTG	1687	False	NA	15	True	CATAAA	-16	NA	125073022	125106037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.71	chr6	+	5297	31	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	6268	1	5861	-1	3prime_fragment	FALSE	canonical	3	227	junction_2	86.696590987702	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	8057	False	NA	13	True	AATAAA	-17	NA	125079392	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.74	chr6	+	4419	28	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	9011	257	-8368	-251	3prime_fragment	FALSE	canonical	3	287	junction_5	75.2408478499889	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTTTTGGTTTTATT	NA	False	NA	14	True	AAGAAA	-15	NA	125082135	125107297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.75	chr6	+	4466	27	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	-7134	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	108.520585400288	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGATCTGGTTCT	112	False	NA	7	True	AATAAA	-11	NA	125083369	125107547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099516_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.76	chr6	+	4418	27	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	-7110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.745960336172	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	136	False	NA	8	True	AATAAA	-12	NA	125083393	125107548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086411_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.78	chr6	+	4083	26	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	10476	254	-6903	-248	3prime_fragment	FALSE	canonical	3	287	junction_3	73.6776764020147	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTGGTTTTATTTTG	169	False	NA	17	True	AAGAAA	-18	NA	125083600	125107300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.8	chr6	+	5925	38	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	83	-1511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	120.163548155555	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCCGAGCCTGTGTG	1691	False	NA	15	True	CATAAA	-16	NA	125073026	125106037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099516_125099788_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.80	chr6	+	3705	22	NNC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	-4491	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	112.610278527015	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGATCTGGTTCT	2581	False	NA	7	True	AATAAA	-11	NA	125086012	125107547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105954_125106782
ES.29512.81	chr6	+	3558	20	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	13470	0	-3909	0	3prime_fragment	FALSE	canonical	3	349	junction_1	60.8659578084877	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	3163	False	NA	14	True	AATAAA	-18	NA	125086594	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.82	chr6	+	3634	19	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-3899	2	intron_retention	FALSE	canonical	3	349	junction_1	62.2725986547043	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTTCTGTGTGGGTG	3173	False	NA	16	True	AATAAA	-20	NA	125086604	125107556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.85	chr6	+	2895	16	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	326	-1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_2	114.192157738125	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	7426	False	NA	13	True	AATAAA	-17	NA	125090857	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.88	chr6	+	2566	15	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	18127	92	720	-86	3prime_fragment	FALSE	canonical	3	357	junction_1	54.0312173560766	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	7820	False	NA	-78	True	AATAAA	-6	NA	125091251	125107462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.89	chr6	+	1899	11	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	878	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	153.391655574871	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	7978	False	NA	13	True	AATAAA	-17	NA	125091409	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098523_125100312_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.9	chr6	+	6668	38	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	-68	0	intron_retention	FALSE	canonical	3	138	junction_8	109.498624958429	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1721	False	NA	14	True	AATAAA	-18	NA	125073056	125107554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.90	chr6	+	3273	14	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	23249	1	-356	-1	3prime_fragment	FALSE	canonical	3	410	junction_5	46.734045469199	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	194	False	NA	13	True	AATAAA	-17	NA	125096373	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.92	chr6	+	3189	13	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	24165	1	560	-1	intron_retention	FALSE	canonical	3	410	junction_5	48.2668364407696	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATCTGGTTCTGTGTGG	196	False	NA	13	True	AATAAA	-17	NA	125097289	125107553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754
ES.29512.93	chr6	+	2143	12	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	24480	71	875	-65	3prime_fragment	FALSE	canonical	3	410	junction_3	45.7027767389783	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACCAAAAGCATAAAAAAC	511	False	NA	-57	True	AATAAA	-27	NA	125097604	125107483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ES.29512.94	chr6	+	2005	6	NIC	ENSMUSG00000063870.13	novel	6652	39	NA	NA	1905	-1143	intron_retention	FALSE	canonical	3	414	junction_2	59.192567100946	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1541	False	NA	NA	False	NA	NA	NA	125098634	125106405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125098993_125099085_125099246_125099439_125099512_125099780_125100412_125100511_125100645_125105754
ES.29512.95	chr6	+	3080	2	Genic_Genomic	ENSMUSG00000063870.13	novel	6652	39	NA	NA	6119	-1115	multi-exon	FALSE	non_canonical	0	0	junction_1	0	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAT	1973	False	NA	NA	False	NA	NA	NA	125102848	125106433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_125105002_125105506
ES.29513.1	chr6	-	874	1	Antisense	novelGene_ENSMUSG00000063870.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTACAACAACGGACAC	NA	False	NA	NA	False	NA	NA	NA	125073411	125072537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_125072500_125073400
ES.29514.1	chr6	-	176	1	Intergenic	novelGene_24481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125083279	125083103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125083100_125083300
ES.29515.1	chr6	-	199	1	Intergenic	novelGene_24482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTAGGGTACGGT	NA	False	NA	NA	False	AATAAA	-7	NA	125108183	125107984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125108000_125108200
ES.29516.1	chr6	+	2651	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-53	-1	-53	1	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTGTTTTTTGAG	5384	False	NA	26	True	AATATA	-18	NA	125108818	125121717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.10	chr6	+	2574	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	273.915672343799	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5407	False	NA	24	True	AATATA	-16	NA	125108841	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114181_125114276_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117548_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.11	chr6	+	2628	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	206.283558885983	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5408	False	NA	24	True	AATATA	-16	NA	125108842	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114190_125114281_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.13	chr6	+	2740	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-29	-1	intron_retention	FALSE	canonical	0	0	junction_7	212.708109379775	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5408	False	NA	24	True	AATATA	-16	NA	125108842	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118466_125120963
ES.29516.15	chr6	+	5124	15	ISM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-29	0	-29	0	intron_retention	FALSE	canonical	0	0	junction_7	213.441682997526	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5408	False	NA	25	True	AATATA	-17	NA	125108842	125121716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236
ES.29516.16	chr6	+	1910	15	ISM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-29	3214	-29	-3214	5prime_fragment	FALSE	canonical	0	0	junction_7	213.441682997526	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTCTTTTTAGTGT	5408	False	NA	NA	False	NA	NA	NA	125108842	125118502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236
ES.29516.17	chr6	+	3212	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-29	-2	intron_retention	FALSE	canonical	0	0	junction_7	212.608207743728	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5408	False	NA	23	True	AATATA	-15	NA	125108842	125121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.19	chr6	+	5219	14	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-29	0	intron_retention	FALSE	canonical	3	728	junction_3	41.3114881510511	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5408	False	NA	25	True	AATATA	-17	NA	125108842	125121716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236
ES.29516.2	chr6	+	5261	14	ISM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	-52	1	-52	-1	intron_retention	FALSE	canonical	0	0	junction_7	220.608652402377	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5385	False	NA	24	True	AATATA	-16	NA	125108819	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998
ES.29516.21	chr6	+	3314	14	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_7	219.644979819169	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5422	False	NA	24	True	AATATA	-16	NA	125108856	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125117638_125117752_125117843_125117998_125118466_125120963
ES.29516.22	chr6	+	3354	14	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_7	216.733659799166	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5422	False	NA	23	True	AATATA	-15	NA	125108856	125121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125117638_125117752_125118122_125118236_125118466_125120963
ES.29516.27	chr6	+	3047	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-5	-1332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	279.444369339508	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTTTTGGGCACTAT	5432	False	NA	NA	False	AGTAAA	-21	NA	125108866	125120384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125119186
ES.29516.28	chr6	+	2594	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	206.283558885983	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTGCTGTTGTGTTTTT	5433	False	NA	22	True	AATATA	-14	NA	125108867	125121713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114170_125114268_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.29	chr6	+	2414	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	287.059342865775	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5434	False	NA	24	True	AATATA	-16	NA	125108868	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.3	chr6	+	2796	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-51	-1	intron_retention	FALSE	canonical	0	0	junction_6	213.366695945678	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5386	False	NA	24	True	AATATA	-16	NA	125108820	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.30	chr6	+	1756	9	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.308170020213	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTGCTGTTGTGTTTTT	5434	False	NA	22	True	AATATA	-14	NA	125108868	125121713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109263_125116597_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.31	chr6	+	2803	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_6	213.201351605778	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5434	False	NA	24	True	AATATA	-16	NA	125108868	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.32	chr6	+	2755	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_7	210.063061474212	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5434	False	NA	24	True	AATATA	-16	NA	125108868	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125118122_125118236_125118466_125120963
ES.29516.33	chr6	+	2849	14	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	728	junction_3	34.7389248453127	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5434	False	NA	23	True	AATATA	-15	NA	125108868	125121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125118122_125118236_125118466_125120963
ES.29516.34	chr6	+	3613	13	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_6	223.937289709021	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5434	False	NA	23	True	AATATA	-15	NA	125108868	125121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125118122_125118236_125118466_125120963
ES.29516.35	chr6	+	3468	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-3	-909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	279.444369339508	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGGTTTTTGTTTGT	5434	False	NA	NA	False	NA	NA	NA	125108868	125120807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125119186
ES.29516.38	chr6	+	4312	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	279.606548961612	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5435	False	NA	24	True	AATATA	-16	NA	125108869	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125115916_125116116_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.43	chr6	+	3502	13	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	8	-4	intron_retention	FALSE	canonical	3	728	junction_3	41.2542927059314	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTGCTGTTGTGTTTT	5445	False	NA	21	True	AATATA	-13	NA	125108879	125121712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125111695_125113875_125113932_125114017_125114474_125114597_125114688_125116602_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.45	chr6	+	3668	15	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	286.302332352016	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5452	False	NA	24	True	AATATA	-16	NA	125108886	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111855_125113064_125113932_125114017_125114179_125114272_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118466_125120963
ES.29516.46	chr6	+	5287	13	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	16	-2	intron_retention	FALSE	canonical	3	728	junction_3	42.8764374556573	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGTTGTGTTTTTT	5453	False	NA	23	True	AATATA	-15	NA	125108887	125121714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998
ES.29516.47	chr6	+	4493	15	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	21	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	288.257971551986	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5458	False	NA	24	True	AATATA	-16	NA	125108892	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125115916_125116116_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.48	chr6	+	2894	14	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_6	220.318945780481	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5458	False	NA	24	True	AATATA	-16	NA	125108892	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118466_125120963
ES.29516.49	chr6	+	7864	10	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	21	-1	intron_retention	FALSE	canonical	3	728	junction_3	43.8862165149834	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5458	False	NA	24	True	AATATA	-16	NA	125108892	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114474_125114597_125117638_125117752_125117843_125117998
ES.29516.5	chr6	+	2658	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	267.552229584348	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5401	False	NA	24	True	AATATA	-16	NA	125108835	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108993_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.51	chr6	+	2698	17	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	319.462090620703	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTGCTGTTGTGTTTT	5458	False	NA	21	True	AATATA	-13	NA	125108892	125121712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125118986_125119113_125120963
ES.29516.53	chr6	+	3159	12	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	36	-1	intron_retention	FALSE	canonical	0	0	junction_6	233.540376462008	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5473	False	NA	24	True	AATATA	-16	NA	125108907	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125118466_125120963
ES.29516.54	chr6	+	2469	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	325.089908931189	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5473	False	NA	24	True	AATATA	-16	NA	125108907	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110716_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117548_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.56	chr6	+	2590	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	279.020540860744	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5509	False	NA	24	True	AATATA	-16	NA	125108943	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108993_125109130_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.59	chr6	+	4523	14	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	1508	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	297.433021648343	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTGCTGTTGTGTTTTT	7069	False	NA	22	True	AATATA	-14	NA	125110503	125121713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125120623_125120963
ES.29516.6	chr6	+	2626	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	279.088006828591	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	5401	False	NA	24	True	AATATA	-16	NA	125108835	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110487_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.60	chr6	+	2257	12	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	2512	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	239.612738523664	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	8073	False	NA	24	True	AATATA	-16	NA	125111507	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125111695_125113875_125113932_125114017_125114174_125114268_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.61	chr6	+	2261	13	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	2615	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	360.220495746085	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	8176	False	NA	24	True	AATATA	-16	NA	125111610	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120515_125120623_125120963
ES.29516.62	chr6	+	3909	11	ISM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	3165	1	3041	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	250.205115854972	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	8602	False	NA	24	True	AATATA	-16	NA	125112036	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.63	chr6	+	1909	10	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	5278	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	392.198929116335	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	297	False	NA	24	True	AATATA	-16	NA	125114273	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117548_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120515_125120623_125120963
ES.29516.64	chr6	+	3142	6	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	6528	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	338.554929073555	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTTGCTGTTGTGTTTTT	1547	False	NA	22	True	AATATA	-14	NA	125115523	125121713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125115916_125116116_125116691_125116768_125117843_125117998_125118122_125118236_125118466_125120963
ES.29516.65	chr6	+	4296	1	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	8424	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCTGTTGTGTTTTTTG	3443	False	NA	24	True	AATATA	-16	NA	125117419	125121715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125117400_125121700
ES.29516.66	chr6	+	4735	8	NNC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	-18	-2	intron_retention	FALSE	canonical	2	8	junction_1	17.8634274655321	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8209	False	NA	9	True	AATAAA	-16	NA	125122185	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.67	chr6	+	2837	9	NIC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.7616368464237	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGATTGAGCCTGCT	8227	False	NA	5	True	AATAAA	-12	NA	125122203	125138739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
ES.29516.68	chr6	+	3982	11	NNC	ENSMUSG00000038271.18	novel	2868	9	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	20.7819633336218	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8228	False	NA	9	True	AATAAA	-16	NA	125122204	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125125587_125125827_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125128757_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
ES.29516.70	chr6	+	5531	8	NNC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_4	21.0538667736463	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8229	False	NA	9	True	AATAAA	-16	NA	125122205	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125128489_125128760_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.71	chr6	+	4634	7	NIC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	2	1	intron_retention	FALSE	canonical	3	22	junction_1	13.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGAGCCTGCTTCACCTC	8229	False	NA	12	True	AATAAA	-19	NA	125122205	125138746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125122993_125126551_125126613_125126703_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.72	chr6	+	3985	9	NNC	ENSMUSG00000038271.18	novel	2868	9	NA	NA	3	-2	intron_retention	FALSE	canonical	2	3	junction_5	19.9620734143525	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8230	False	NA	9	True	AATAAA	-16	NA	125122206	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125128757_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.73	chr6	+	4170	7	NIC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	22	junction_1	12.6315302143309	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8230	False	NA	9	True	AATAAA	-16	NA	125122206	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.74	chr6	+	2843	9	NNC	ENSMUSG00000038271.18	novel	3013	9	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.5352323908182	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8231	False	NA	9	True	AATAAA	-16	NA	125122207	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129570_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
ES.29516.76	chr6	+	3735	10	NNC	ENSMUSG00000038271.18	novel	2868	9	NA	NA	-5	0	intron_retention	FALSE	canonical	2	3	junction_5	18.8960770636411	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGATTGAGCCTGCT	8232	False	NA	5	True	AATAAA	-12	NA	125122208	125138739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125128757_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
ES.29516.77	chr6	+	2917	10	NNC	ENSMUSG00000038271.18	novel	2833	10	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.7374542691621	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8232	False	NA	9	True	AATAAA	-16	NA	125122208	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
ES.29516.78	chr6	+	3401	10	NNC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_1	20.3293863807367	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	8234	False	NA	9	True	AATAAA	-16	NA	125122210	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125125587_125125827_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.81	chr6	+	2459	9	NNC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	-84	-5	intron_retention	FALSE	canonical	2	8	junction_1	17.2898091371767	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAAAAGTTGATTGAGC	417	False	NA	0	True	AATAAA	-7	NA	125122904	125138734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.82	chr6	+	5269	7	ISM	ENSMUSG00000038271.18	ENSMUST00000141230.8	3056	8	1350	-4	590	-2	3prime_fragment	FALSE	canonical	3	26	junction_3	11.6999525165228	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	1091	False	NA	9	True	AATAAA	-16	NA	125123578	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.83	chr6	+	3443	8	NIC	ENSMUSG00000038271.18	novel	436	4	NA	NA	-971	-2	intron_retention	FALSE	canonical	2	10	junction_1	15.4126902391556	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	2511	False	NA	9	True	AATAAA	-16	NA	125124998	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.84	chr6	+	4904	6	NIC	ENSMUSG00000038271.18	novel	3056	8	NA	NA	-478	-2	intron_retention	FALSE	canonical	3	26	junction_2	12.6901536633722	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGAGCCTGCTTCAC	3004	False	NA	9	True	AATAAA	-16	NA	125125491	125138743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125126613_125126703_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
ES.29516.85	chr6	+	2518	8	NIC	ENSMUSG00000038271.18	novel	2283	10	NA	NA	110	-2	intron_retention	FALSE	canonical	3	25	junction_5	12.2474487139159	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTTGATTGAGCCTG	3592	False	NA	3	True	AATAAA	-10	NA	125126079	125138737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130369_125130466_125136024_125136156_125137495
ES.29516.87	chr6	+	1251	7	NNC	ENSMUSG00000038271.18	novel	4233	7	NA	NA	1488	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.6836793312751	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCGTGTGAAGCAGATTCA	5491	False	NA	NA	False	NA	NA	NA	125127978	125137945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125128130_125128347_125128489_125129570_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
ES.29516.88	chr6	+	3588	3	FSM	ENSMUSG00000030335.7_ENSMUSG00000093157.3	ENSMUST00000136804.2	855	3	-22	-2711	-22	0	multi-exon	FALSE	canonical	3	70	junction_1	333	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGGTTTTCTTCT	NA	False	NA	NA	False	ACTAAA	-15	NA	125168741	125173232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169172_125169478_125169590_125170185
ES.29516.89	chr6	+	834	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	15	6	15	-6	multi-exon	FALSE	canonical	3	70	junction_1	333	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACGTCTGCCTCGTT	NA	False	NA	43	True	GGGGCT	-42	NA	125168778	125170515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169172_125169478_125169590_125170185
ES.29516.9	chr6	+	2617	17	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	-30	55381	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	271.152517045297	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTCATAAACATAATCC	5407	False	NA	NA	False	AATATA	-7	NA	125108841	125177097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963_125121689_125177079
ES.29516.90	chr6	+	1510	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	35	-690	35	690	multi-exon	FALSE	canonical	3	70	junction_1	333	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCAAGTGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	125168798	125171211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169172_125169478_125169590_125170185
ES.29516.91	chr6	+	3587	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	-323	163	41	-163	multi-exon	FALSE	canonical	3	716	junction_1	10	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATCCAAGAAAATGAA	NA	False	NA	NA	False	TTTAAA	-15	NA	125168804	125173069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29516.92	chr6	+	4006	3	FSM	ENSMUSG00000030335.7_ENSMUSG00000093157.3	ENSMUST00000136804.2	855	3	43	-3194	43	483	multi-exon	FALSE	canonical	3	70	junction_1	333	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATGAAGCGCGGTGGT	NA	False	NA	NA	False	NA	NA	NA	125168806	125173715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169172_125169478_125169590_125170185
ES.29516.93	chr6	+	819	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	0	2608	0	103	multi-exon	FALSE	canonical	3	716	junction_1	10	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGCACCTCGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	125169127	125170624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29516.94	chr6	+	3412	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	15	0	15	0	multi-exon	FALSE	canonical	3	716	junction_1	10	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGGTTTTCTTCT	NA	False	NA	NA	False	ACTAAA	-15	NA	125169142	125173232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29516.95	chr6	+	690	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	26	2711	-26	0	multi-exon	FALSE	canonical	3	716	junction_1	10	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125169153	125170521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29516.96	chr6	+	1373	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	33	2021	-19	690	multi-exon	FALSE	canonical	3	716	junction_1	10	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCAAGTGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	125169160	125171211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29516.97	chr6	+	2310	4	NNC	ENSMUSG00000030335.7	novel	3427	3	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	342.33706586735	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATCATTTTCTCTGGGT	NA	False	NA	NA	False	ACTAAA	-7	NA	125169170	125173224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125169397_125169478_125169590_125170185_125171381_125172446
ES.29516.98	chr6	+	852	3	NNC	ENSMUSG00000030335.7	novel	3427	3	NA	NA	-9	147	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	357	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATCTTATTTTTTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	125169170	125170668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125169397_125169478_125169622_125170185
ES.29516.99	chr6	+	1505	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	46	1876	-6	835	multi-exon	FALSE	canonical	3	716	junction_1	10	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGATATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	125169173	125171356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125169397_125169478_125169590_125170185
ES.29517.1	chr6	-	1762	15	Antisense	novelGene_ENSMUSG00000038279.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCGTCACAACGCCCCG	NA	False	NA	NA	False	NA	NA	NA	125118355	125108837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_125108961_125109164_125109276_125110479_125110527_125110675_125110764_125111507_125111692_125113873_125113930_125114016_125114179_125114273_125114472_125114595_125114683_125116597_125116689_125116766_125116907_125117494_125117636_125117750_125117841_125117996_125118121_125118235
ES.29517.2	chr6	-	3376	9	Antisense	novelGene_ENSMUSG00000038279.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCAGTGGTAGCACAC	NA	False	NA	NA	False	TTTAAA	-42	NA	125118353	125113620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_125113931_125114016_125114179_125114273_125114472_125114595_125116689_125116766_125116907_125117494_125117636_125117750_125117841_125117996_125118121_125118235
ES.29518.1	chr6	-	2875	5	ISM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	624	-5	-146	4	3prime_fragment	FALSE	canonical	3	6089	junction_1	2256.79489265197	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTTTTAATGCGGTG	NA	False	NA	-11	True	AATAAA	-19	NA	125142112	125138811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101
ES.29518.10	chr6	-	1235	6	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	680	0	at_least_one_novel_splicesite	FALSE	canonical	2	471	junction_5	4194.18058743302	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125141199	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141121
ES.29518.11	chr6	-	1389	7	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4049.97499649346	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142522	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125138862_125138918_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233
ES.29518.12	chr6	-	1425	7	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	204	junction_5	3916.70276933715	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142567	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142059_125142275_125142514
ES.29518.13	chr6	-	1311	7	NNC	ENSMUSG00000057666.19	novel	1272	7	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_6	4003.91573615407	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125143489	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143376
ES.29518.14	chr6	-	1264	7	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	4043.00748893142	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTCCTTGGTTTTAAT	NA	False	NA	-17	True	AATAAA	-13	NA	125142514	125138817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142447
ES.29518.2	chr6	-	1429	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	-6	-3	-6	2	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGGTTTTAATGCGG	NA	False	NA	-13	True	AATAAA	-17	NA	125142742	125138813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ES.29518.3	chr6	-	3644	2	FSM	ENSMUSG00000057666.19	ENSMUST00000147954.2	565	2	-3078	-1	0	1	multi-exon	FALSE	canonical	3	6089	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142568	125138814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125139065_125139174
ES.29518.5	chr6	-	1619	7	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	3	681	junction_5	3762.93865659983	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142561	125138814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141861_125142275_125142514
ES.29518.6	chr6	-	3396	3	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	6	1	intron_retention	FALSE	canonical	3	6089	junction_1	1017.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	False	NA	-14	True	AATAAA	-16	NA	125142560	125138814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125139065_125139174_125142275_125142514
ES.29518.7	chr6	-	3742	1	FSM	ENSMUSG00000057666.19	ENSMUST00000192506.2	3289	1	-591	138	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142557	125138815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125138800_125142600
ES.29518.8	chr6	-	1393	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	832	junction_5	4068.19726168729	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142051	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125141815
ES.29518.9	chr6	-	1469	5	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	6089	junction_1	1441.13000367767	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142567	125138816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125139065_125139174_125140004_125140101_125140400_125142233_125142275_125142514
ES.29519.1	chr6	-	6864	28	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	46	8	intron_retention	TRUE	canonical	1	2	junction_18	169.856350185139	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGTCTGTCCCAT	3539	False	NA	-1	True	AATAAA	-28	NA	125168520	125144961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148911_125149952_125150126_125150322_125150488_125150563_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157813_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.10	chr6	-	4810	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	33	0	intron_retention	FALSE	canonical	3	436	junction_20	79.3484929493518	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3526	False	NA	-9	True	AATAAA	-20	NA	125168533	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.11	chr6	-	6660	30	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-33	0	intron_retention	FALSE	canonical	3	436	junction_19	79.8088679923849	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3460	False	NA	-9	True	AATAAA	-20	NA	125168599	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.12	chr6	-	10367	19	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-23	0	intron_retention	FALSE	canonical	2	8	junction_15	143.237177048729	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3470	False	NA	-9	True	AATAAA	-20	NA	125168589	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145712_125145825_125147178_125147689_125147785_125147878_125148057_125148360_125150488_125150563_125154516_125154771_125154888_125156200_125156376_125156475_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.13	chr6	-	4843	31	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	1580	0	intron_retention	FALSE	canonical	0	0	junction_15	163.800383258268	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	5186	False	NA	-9	True	AATAAA	-20	NA	125166873	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125152140_125152245_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725
ES.29519.14	chr6	-	3766	25	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	2538	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	182.262740562141	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	9785	False	NA	-9	True	AATAAA	-20	NA	125161020	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125151914_125152118_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876
ES.29519.15	chr6	-	4338	30	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	1590	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	132.102201634097	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	5196	False	NA	-9	True	AATAAA	-20	NA	125166863	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125164039_125164116_125166725
ES.29519.17	chr6	-	4533	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-33	0	intron_retention	FALSE	canonical	3	436	junction_20	75.9681219693863	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3573	False	NA	-9	True	AATAAA	-20	NA	125168486	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.18	chr6	-	7004	29	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	47	0	intron_retention	FALSE	canonical	3	436	junction_18	79.1975297878021	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3540	False	NA	-9	True	AATAAA	-20	NA	125168519	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.19	chr6	-	4436	31	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	164.060842372578	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3507	False	NA	-9	True	AATAAA	-20	NA	125168552	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150318_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.2	chr6	-	5059	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	-422	-8	-422	8	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGTCTGTCCCAT	2973	False	NA	-1	True	AATAAA	-28	NA	125169086	125144961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.22	chr6	-	8209	16	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-1698	0	intron_retention	FALSE	canonical	3	436	junction_14	91.2348374008282	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	8408	False	NA	-9	True	AATAAA	-20	NA	125158073	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125150488_125150563_125150649_125150742_125153191_125153614_125153790_125154290_125154516_125154771_125156376_125156475_125156564_125156657_125156793_125157941
ES.29519.23	chr6	-	4913	30	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	24	0	intron_retention	FALSE	canonical	3	436	junction_19	79.5348546452955	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3517	False	NA	-9	True	AATAAA	-20	NA	125168542	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.24	chr6	-	4301	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	128.390768305421	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3570	False	NA	-9	True	AATAAA	-20	NA	125168489	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125158094_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.25	chr6	-	5027	30	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-4	0	intron_retention	FALSE	canonical	3	436	junction_20	80.6447856383411	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3391	False	NA	-9	True	AATAAA	-20	NA	125168668	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.27	chr6	-	3283	6	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	920	-2	intron_retention	FALSE	canonical	3	638	junction_4	36.4669713576546	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	NA	False	NA	-11	True	AATAAA	-18	NA	125149934	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878
ES.29519.29	chr6	-	4358	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-36	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_22	158.371647995747	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3570	False	NA	-11	True	AATAAA	-18	NA	125168489	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.3	chr6	-	4475	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	23	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	130.183613920237	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGGCTGGTCTGT	3418	False	NA	-6	True	AATAAA	-23	NA	125168641	125144966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.30	chr6	-	4672	28	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-88	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	136.128459463826	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	8413	False	NA	-11	True	AATAAA	-18	NA	125163646	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157813_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062
ES.29519.31	chr6	-	3722	11	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	199	-2	intron_retention	FALSE	canonical	3	583	junction_9	48.1041578244542	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	NA	False	NA	-11	True	AATAAA	-18	NA	125151293	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148723_125148795_125150126_125150322_125150488_125150563
ES.29519.33	chr6	-	4743	14	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	41	-2	intron_retention	FALSE	canonical	2	7	junction_8	179.617114140907	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	9785	False	NA	-11	True	AATAAA	-18	NA	125154312	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148495_125148598_125148911_125149952_125150126_125150322_125150488_125150563_125153191_125153614_125153790_125154290
ES.29519.34	chr6	-	4633	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	436	junction_20	79.9476842830499	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3462	False	NA	-11	True	AATAAA	-18	NA	125168597	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.38	chr6	-	4429	31	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	157.094553975906	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3426	False	NA	-11	True	AATAAA	-18	NA	125168633	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145929_125146833_125146956_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.39	chr6	-	6797	27	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	436	junction_16	82.7727336976796	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3564	False	NA	-11	True	AATAAA	-18	NA	125168495	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148911_125149952_125150126_125150322_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.40	chr6	-	6807	30	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	44	-2	intron_retention	FALSE	canonical	1	2	junction_20	131.833336214538	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3439	False	NA	-11	True	AATAAA	-18	NA	125168620	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157813_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.41	chr6	-	4607	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_22	126.016045424678	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3391	False	NA	-11	True	AATAAA	-18	NA	125168668	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156769_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.42	chr6	-	4520	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_28	155.428600804263	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3586	False	NA	-11	True	AATAAA	-18	NA	125168473	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.43	chr6	-	4523	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	183.029819079341	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3591	False	NA	-11	True	AATAAA	-18	NA	125168468	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148715_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153618_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.44	chr6	-	5724	29	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	56	-2	intron_retention	FALSE	canonical	3	436	junction_18	72.9471432907809	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3549	False	NA	-11	True	AATAAA	-18	NA	125168510	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.45	chr6	-	9679	21	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_8	178.406305942363	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3591	False	NA	-11	True	AATAAA	-18	NA	125168468	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125147785_125147878_125148517_125148598_125150649_125150742_125153191_125153614_125153790_125154290_125154516_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.46	chr6	-	4608	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	50	junction_30	123.00253384924	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3591	False	NA	-11	True	AATAAA	-18	NA	125168468	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.47	chr6	-	7169	12	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	945	-2	intron_retention	FALSE	canonical	3	538	junction_10	60.6165293988664	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	9920	False	NA	-11	True	AATAAA	-18	NA	125155430	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125150126_125150322_125153790_125154290_125154516_125154771
ES.29519.48	chr6	-	4407	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	41	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	128.067469197555	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3534	False	NA	-11	True	AATAAA	-18	NA	125168525	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.49	chr6	-	4419	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_22	129.620767369019	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3405	False	NA	-11	True	AATAAA	-18	NA	125168654	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.5	chr6	-	4564	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-40	2	combination_of_known_junctions	FALSE	canonical	3	50	junction_31	121.390529984967	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTCCTGGCTGGTCTG	3566	False	NA	-7	True	AATAAA	-22	NA	125168493	125144967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.52	chr6	-	5093	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	161.987094975512	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3524	False	NA	-11	True	AATAAA	-18	NA	125168535	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150874_125151187_125151746_125152932_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.53	chr6	-	5502	31	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-425	-2	intron_retention	FALSE	canonical	0	0	junction_7	161.383287720741	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	2970	False	NA	-11	True	AATAAA	-18	NA	125169089	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148203_125148360_125148517_125148598_125148715_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.57	chr6	-	4007	30	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.42637943828	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	3549	False	NA	-11	True	AATAAA	-18	NA	125168510	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145197_125146871_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.58	chr6	-	3581	25	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	2323	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	181.64617143563	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	9570	False	NA	-11	True	AATAAA	-18	NA	125161235	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148808_125148896_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191
ES.29519.59	chr6	-	6616	11	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-91	-2	intron_retention	FALSE	canonical	3	486	junction_10	63.5144865365375	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	9620	False	NA	-11	True	AATAAA	-18	NA	125153792	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125150126_125150322_125153191_125153614
ES.29519.6	chr6	-	4445	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	128.3435085677	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3537	False	NA	-9	True	AATAAA	-20	NA	125168522	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148681_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.60	chr6	-	3953	27	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	760	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	171.399102584768	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATCCTGTCCTGGCTGG	9261	False	NA	-11	True	AATAAA	-18	NA	125162798	125144971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147876_125148049_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656
ES.29519.61	chr6	-	4561	32	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	128.469085508232	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	3466	False	NA	-12	True	AATAAA	-17	NA	125168593	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151181_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.62	chr6	-	4774	20	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-348	-3	intron_retention	FALSE	canonical	3	436	junction_19	85.9054430892162	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	9758	False	NA	-12	True	AATAAA	-17	NA	125156723	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125156376_125156475_125156564_125156657
ES.29519.63	chr6	-	4110	28	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	353	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	136.68653875398	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	8854	False	NA	-12	True	AATAAA	-17	NA	125163205	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163054
ES.29519.65	chr6	-	4585	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	25	-3	intron_retention	FALSE	canonical	3	436	junction_21	80.2252661780148	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	3518	False	NA	-12	True	AATAAA	-17	NA	125168541	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.66	chr6	-	3844	13	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	16124	3	-1048	-3	intron_retention	FALSE	canonical	3	496	junction_10	65.0454968976844	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	NA	False	NA	-12	True	AATAAA	-17	NA	125152540	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563
ES.29519.68	chr6	-	4874	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	44	-3	intron_retention	FALSE	canonical	2	8	junction_27	129.161832167591	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	3439	False	NA	-12	True	AATAAA	-17	NA	125168620	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.7	chr6	-	4674	10	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-283	0	intron_retention	FALSE	canonical	3	583	junction_7	40.5885710362589	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	125151155	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125147178_125147689_125147785_125147878_125148517_125148598_125148723_125148795_125150126_125150322_125150488_125150563_125150649_125150742
ES.29519.70	chr6	-	4451	32	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_28	127.339141759058	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCATCCTGTCCTGGCTG	3550	False	NA	-12	True	AATAAA	-17	NA	125168509	125144972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163225_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.71	chr6	-	5428	29	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-33	-4	intron_retention	FALSE	canonical	1	1	junction_12	133.818735914044	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCATCCTGTCCTGGCT	3573	False	NA	-13	True	AATAAA	-16	NA	125168486	125144973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.72	chr6	-	3594	25	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	2322	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	143.347909869272	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCATCCTGTCCTGGCT	9569	False	NA	-13	True	AATAAA	-16	NA	125161236	125144973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153119_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191
ES.29519.73	chr6	-	2646	17	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-34	18	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	124.37630338513	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCACCAAACACCTTTAG	3572	False	NA	NA	False	NA	NA	NA	125168487	125152793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168356
ES.29519.74	chr6	-	1565	10	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	66	12749	-32	3540	5prime_fragment	FALSE	canonical	3	466	junction_4	45.0998891351187	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATGGGTATGAGTGTT	3461	False	NA	NA	False	NA	NA	NA	125168598	125157718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.75	chr6	-	2134	6	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	4432	12749	-674	3540	intron_retention	FALSE	canonical	3	466	junction_4	47.9583152331272	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATGGGTATGAGTGTT	7827	False	NA	NA	False	NA	NA	NA	125164232	125157718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062
ES.29519.8	chr6	-	4747	33	NNC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	158.900909448113	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3381	False	NA	-9	True	AATAAA	-20	NA	125168678	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125152140_125152245_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ES.29519.9	chr6	-	7641	25	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	-4	0	intron_retention	FALSE	canonical	3	436	junction_15	85.8998831812684	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3391	False	NA	-9	True	AATAAA	-20	NA	125168668	125144969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148911_125149952_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163776_125164039_125164116_125166725_125166872_125168460
ES.2952.1	chr10	-	177	2	Antisense	novelGene_ENSMUSG00000071253.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	1271	False	NA	NA	False	NA	NA	NA	62763130	62761862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_62761877_62762967
ES.2952.2	chr10	-	398	1	Intergenic	novelGene_2292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	2141	False	NA	NA	False	NA	NA	NA	62762260	62761862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62761900_62762300
ES.2952.3	chr10	-	291	1	Intergenic	novelGene_2293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGCACATGGTGGCTCA	2141	False	NA	NA	False	NA	NA	NA	62762260	62761969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62762000_62762300
ES.2952.4	chr10	-	178	1	Intergenic	novelGene_2294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2140	False	NA	NA	False	NA	NA	NA	62762261	62762083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62762100_62762300
ES.2952.5	chr10	-	178	1	Intergenic	novelGene_2295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	1272	False	NA	NA	False	NA	NA	NA	62763129	62762951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62763000_62763100
ES.29520.1	chr6	-	124	1	Intergenic	novelGene_24483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9799	False	NA	NA	False	NA	NA	NA	125181883	125181759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125181800_125181900
ES.29521.1	chr6	+	3211	4	FSM	ENSMUSG00000030337.17	ENSMUST00000100942.9	3011	4	-198	-2	-168	2	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGACTTGATTGTTGT	152	False	NA	NA	False	AATACA	-13	NA	125192345	125199128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125192691_125195536_125195664_125195873_125196033_125196548
ES.29522.1	chr6	-	2402	6	ISM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	689	-3	689	3	3prime_fragment	FALSE	canonical	1	1	junction_3	5.03587132480567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTCTTCTCTCTCTCC	9202	False	NA	NA	False	AATAAA	-20	NA	125208134	125200892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517
ES.29522.2	chr6	-	2056	7	FSM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	-12	308	-12	-308	multi-exon	FALSE	canonical	1	1	junction_3	4.61880215351701	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTAAT	8501	False	NA	NA	False	NA	NA	NA	125208835	125201203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517_125207761_125208496
ES.29523.1	chr6	-	344	1	Genic_Genomic	ENSMUSG00000030336.15	novel	NA	NA	NA	NA	530	28	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGGAGATGGCACAGTA	3950	False	NA	NA	False	NA	NA	NA	125213386	125213042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_125213000_125213400
ES.29524.1	chr6	-	168	1	Intergenic	novelGene_24484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	4851	False	NA	NA	False	NA	NA	NA	125236819	125236651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125236700_125236800
ES.29525.1	chr6	-	283	1	Antisense	novelGene_ENSMUSG00000108129.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAC	8336	False	NA	NA	False	NA	NA	NA	125245885	125245602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_125245600_125245900
ES.29526.1	chr6	+	142	1	Intergenic	novelGene_24485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	125257136	125257278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125257100_125257300
ES.29527.1	chr6	-	1455	5	NNC	ENSMUSG00000067702.6	novel	1509	5	NA	NA	17	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	288.785820289016	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTAGTGTGTTGT	3478	False	NA	-3	True	AATAAA	-33	NA	125262988	125255231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125255618_125257932_125258614_125259315_125259423_125259718_125259942_125262930
ES.29527.2	chr6	-	1551	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	-38	-4	-38	4	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTCTCTAGTGTGTTG	3423	False	NA	-4	True	AATAAA	-32	NA	125263043	125255232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
ES.29527.3	chr6	-	3610	4	ISM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	882	6	882	-6	3prime_fragment	FALSE	canonical	3	590	junction_2	47.9745302796761	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGGCATTTCCTCTC	4343	False	NA	-14	True	AATAAA	-22	NA	125262123	125255242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718
ES.29527.5	chr6	-	3823	3	ISM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	912	17	912	-17	intron_retention	FALSE	canonical	3	590	junction_2	58.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTTCTAGACTGAGG	4373	False	NA	-25	True	AATAAA	-11	NA	125262093	125255253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_125255618_125257932_125258614_125259315
ES.29528.1	chr6	+	2614	12	NNC	ENSMUSG00000030340.17	novel	3354	13	NA	NA	-7076	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.31288493787065	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTCTGCAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	125290545	125321903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125290699_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ES.29528.2	chr6	+	3606	12	FSM	ENSMUSG00000030340.17	ENSMUST00000081440.14	3499	12	-107	0	28	0	multi-exon	FALSE	canonical	2	3	junction_6	2.74539434009845	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGCAGTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	125298195	125321906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125299338_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ES.29528.3	chr6	+	178	1	Intergenic	novelGene_24486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	125306334	125306512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125306300_125306500
ES.29529.1	chr6	-	2022	10	NNC	ENSMUSG00000030339.8	novel	2107	10	NA	NA	77	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.8584117006507	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGGGTTTTATGTG	NA	False	NA	-1	True	AATAAA	-20	NA	125290771	125283534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289079_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
ES.29529.2	chr6	-	2096	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	10	1	10	-1	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGGGTTTTATGTG	NA	False	NA	-1	True	AATAAA	-20	NA	125290838	125283534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
ES.2953.1	chr10	-	193	1	Intergenic	novelGene_2296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAAAACATCAAAACAAG	604	False	NA	NA	False	NA	NA	NA	62763797	62763604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62763600_62763800
ES.29530.1	chr6	+	2160	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	-13	9	-13	-9	multi-exon	TRUE	canonical	3	24	junction_1	4.54062594260057	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATCGCTGACCCTG	3763	False	NA	6	True	AATACA	-11	NA	125326672	125339438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ES.29530.2	chr6	+	1677	5	FSM	ENSMUSG00000030341.18	ENSMUST00000134803.2	764	5	-312	-601	-312	-9	multi-exon	FALSE	canonical	3	27	junction_3	5.67340285895511	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATCGCTGACCCTG	NA	False	NA	6	True	AATACA	-11	NA	125337077	125339438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ES.29531.1	chr6	+	160	2	Antisense	novelGene_ENSMUSG00000038167.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	394	False	NA	NA	False	NA	NA	NA	125343193	125360779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_125343219_125360644
ES.29531.2	chr6	+	1378	1	Antisense	novelGene_ENSMUSG00000038167.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTATGAGTGTT	3542	False	NA	NA	False	ATTAAA	-13	NA	125349349	125350727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_125349300_125350700
ES.29531.3	chr6	+	158	1	Intergenic	novelGene_24487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	125360621	125360779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125360600_125360800
ES.29532.1	chr6	-	4656	18	NNC	ENSMUSG00000038167.7	novel	3299	17	NA	NA	428	2983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.48997575863325	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGTCAAGAGTAAAAATT	NA	False	NA	NA	False	AATAAA	-15	NA	125357328	125336639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125337460_125338657_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
ES.29532.2	chr6	-	2808	5	NNC	ENSMUSG00000038167.7	novel	3299	17	NA	NA	10311	2866	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.91547594742265	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACGGTCGAAGGGCTGA	3966	False	NA	NA	False	AATAAA	-2	NA	125347445	125336756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125337460_125338657_125339831_125340004_125340683_125341546_125341699_125347343
ES.29532.3	chr6	-	3307	17	FSM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	2	-10	2	10	multi-exon	FALSE	canonical	0	0	junction_7	3.59198326137525	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTGAACACTGGAT	NA	False	NA	NA	False	TATAAA	-18	NA	125357754	125339612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
ES.29532.4	chr6	-	2915	17	NNC	ENSMUSG00000038167.7	novel	3299	17	NA	NA	290	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.64862987983161	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGTTGTTTGGTGAA	NA	False	NA	NA	False	TATAAA	-10	NA	125357466	125339620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349830_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
ES.29533.1	chr6	+	203	1	Intergenic	novelGene_24488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATATAATAAT	6418	False	NA	NA	False	NA	NA	NA	125368377	125368580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125368400_125368600
ES.29534.1	chr6	+	241	1	Intergenic	novelGene_24489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAGAAGAAG	9052	False	NA	NA	False	AATAAA	-13	NA	125371011	125371252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125371000_125371300
ES.29535.1	chr6	+	205	1	Intergenic	novelGene_24490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATATAATAAT	NA	False	NA	NA	False	NA	NA	NA	125373666	125373871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125373700_125373900
ES.29536.1	chr6	+	239	1	Intergenic	novelGene_24491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAAGAAGA	NA	False	NA	NA	False	AATAAA	-11	NA	125376307	125376546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125376300_125376500
ES.29537.1	chr6	+	237	1	Intergenic	novelGene_24492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAAGAAGA	NA	False	NA	NA	False	AATAAA	-11	NA	125378939	125379176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125378900_125379200
ES.29538.1	chr6	+	213	1	Intergenic	novelGene_24493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGCAGCAGATGCAGATA	NA	False	NA	62	True	NA	NA	NA	125389664	125389877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125389700_125389900
ES.29539.1	chr6	+	201	1	Intergenic	novelGene_24494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTATTGTATT	NA	False	NA	NA	False	NA	NA	NA	125390771	125390972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125390800_125391000
ES.2954.1	chr10	-	2406	1	Antisense	novelGene_ENSMUSG00000071253.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCAGTCGGTGGTGTG	3224	False	NA	NA	False	AATGAA	-10	NA	62774607	62772201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_62772200_62774600
ES.29540.1	chr6	-	158	1	Intergenic	novelGene_24495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	125396449	125396291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125396300_125396400
ES.29541.1	chr6	-	882	3	Intergenic	novelGene_24496	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCCAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	125402425	125396638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125396966_125400398_125400605_125402076
ES.29541.2	chr6	-	3010	1	Intergenic	novelGene_24497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGCAAGGGTGGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	125402102	125399092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125399100_125402100
ES.29542.1	chr6	+	1760	1	Intergenic	novelGene_24499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTTAATTCTTTAGTA	NA	False	NA	NA	False	NA	NA	NA	125407776	125409536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125407800_125409500
ES.29542.2	chr6	+	1506	1	Intergenic	novelGene_24498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	125407776	125409282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125407800_125409300
ES.29543.1	chr6	+	567	3	Intergenic	novelGene_24500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	85	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTGGTGATTTTCT	NA	False	NA	2	True	AATAAA	-16	NA	125409637	125435800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125435571
ES.29543.10	chr6	+	201	1	Intergenic	novelGene_24510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATATGTATGTGTGTAT	759	False	NA	NA	False	NA	NA	NA	125433537	125433738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125433500_125433700
ES.29543.2	chr6	+	1517	3	Intergenic	novelGene_24501	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	67	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTGGTGATTTTCT	NA	False	NA	2	True	AATAAA	-16	NA	125409648	125435800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125434610
ES.29543.3	chr6	+	419	3	Intergenic	novelGene_24502	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	92	junction_2	52.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGAGTTGTGTTCTT	NA	False	NA	6	True	NA	NA	NA	125409674	125415341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125415223
ES.29543.4	chr6	+	753	5	Intergenic	novelGene_24503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_3	59.9437236080643	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAACAACTCTGGTGAT	NA	False	NA	-3	True	AATAAA	-11	NA	125409674	125435795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125434610_125434718_125435571
ES.29543.5	chr6	+	630	4	Intergenic	novelGene_24504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	60.7417118260224	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTCTGGTGATTTTCT	NA	False	NA	2	True	AATAAA	-16	NA	125409681	125435800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435571
ES.29543.6	chr6	+	877	4	Intergenic	novelGene_24505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	70.1046836286041	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACAACTCTGGTGATTT	NA	False	NA	-1	True	AATAAA	-13	NA	125409685	125435797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435317
ES.29543.7	chr6	+	621	4	Intergenic	novelGene_24506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	73.0585761944178	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAACTCTGGTGATTTT	NA	False	NA	0	True	AATAAA	-14	NA	125409702	125435798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125409775_125409999_125410201_125415223_125415345_125435571
ES.29543.8	chr6	+	4675	1	Intergenic	novelGene_24508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTATTCTGATTTCTT	7712	False	NA	NA	False	NA	NA	NA	125419033	125423708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125419000_125423700
ES.29543.9	chr6	+	8474	1	Antisense	novelGene_ENSMUSG00000030342.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATGACTGTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	125429032	125437506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_125429000_125437500
ES.29544.1	chr6	+	1534	4	NNC	ENSMUSG00000101191.7	novel	782	4	NA	NA	-14	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGATGGCAAAGTGGGA	NA	False	NA	NA	False	AATAAA	-13	NA	125458311	125462196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125458438_125459526_125459666_125460220_125460533_125461239
ES.29544.2	chr6	+	1384	5	NNC	ENSMUSG00000101191.7	novel	782	4	NA	NA	53	564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1.87082869338697	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGTGGGAATTCAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	125458378	125462205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125458438_125459526_125459666_125460220_125460312_125460403_125460533_125461239
ES.29544.3	chr6	+	1232	3	ISM	ENSMUSG00000101191.7	ENSMUST00000187542.7	782	4	1205	-566	624	566	3prime_fragment	FALSE	canonical	2	2	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGGGAATTCAAAATCA	NA	False	NA	NA	False	AATAAA	-24	NA	125459530	125462207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125459666_125460403_125460533_125461239
ES.29545.1	chr6	-	2852	4	Intergenic	novelGene_24507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAGGTAAAATTAT	1004	False	NA	NA	False	NA	NA	NA	125424455	125411264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125413341_125413883_125414049_125415402_125415520_125423961
ES.29545.2	chr6	-	175	1	Intergenic	novelGene_24509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATGACATGCTGG	3153	False	NA	NA	False	NA	NA	NA	125422306	125422131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125422100_125422300
ES.29546.1	chr6	-	1264	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	-30	-6	-30	6	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGCTGGTATTGCTT	9999	False	NA	-4	True	AATAAA	-21	NA	125471784	125437222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.10	chr6	-	1793	6	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	57	0	intron_retention	FALSE	canonical	3	5197	junction_2	468.604737492057	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	False	NA	-10	True	AATAAA	-15	NA	125471697	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125438273_125439076_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.11	chr6	-	1124	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	4713	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2050.47628115807	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	1287	False	NA	-10	True	AATAAA	-15	NA	125467041	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125466927
ES.29546.12	chr6	-	1248	9	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	3489	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	2688.32033991487	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	63	False	NA	-10	True	AATAAA	-15	NA	125468265	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125448466_125448652_125449371_125449475_125468212
ES.29546.13	chr6	-	3252	4	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	32	0	intron_retention	FALSE	canonical	3	5197	junction_1	589.115344299305	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9998	False	NA	-10	True	AATAAA	-15	NA	125471722	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125439389_125440647_125441451_125449371_125449475_125471536
ES.29546.14	chr6	-	3085	6	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	32	0	intron_retention	FALSE	canonical	3	5253	junction_3	444.001081079765	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9998	False	NA	-10	True	AATAAA	-15	NA	125471722	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125441451_125449371_125449475_125471536
ES.29546.15	chr6	-	2132	6	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	23	0	intron_retention	FALSE	canonical	3	5197	junction_2	464.835196601979	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9989	False	NA	-10	True	AATAAA	-15	NA	125471731	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125437690_125438188_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.16	chr6	-	1187	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2050.0578289504	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9998	False	NA	-10	True	AATAAA	-15	NA	125471722	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441361_125441451_125449371_125449475_125471536
ES.29546.18	chr6	-	1069	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	3487	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2050.47628115807	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	61	False	NA	-10	True	AATAAA	-15	NA	125468267	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125468208
ES.29546.19	chr6	-	1669	7	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	58	0	intron_retention	FALSE	canonical	3	5197	junction_3	469.164653636889	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	NA	False	NA	-10	True	AATAAA	-15	NA	125471696	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.21	chr6	-	1151	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	69	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2061.09275553983	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGGCTGATTGCTGGT	NA	False	NA	-11	True	AATAAA	-14	NA	125471685	125437229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439160_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.23	chr6	-	1339	9	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	72	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	2403.2393990976	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGGGCTGATTGCTGG	NA	False	NA	-12	True	AATAAA	-13	NA	125471682	125437230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125448466_125448652_125449371_125449475_125471536
ES.29546.24	chr6	-	1096	7	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2668.59255455422	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGGGCTGATTGCTGG	9997	False	NA	-12	True	AATAAA	-13	NA	125471723	125437230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440643_125440723_125441352_125441451_125471536
ES.29546.26	chr6	-	1137	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1960.00622656237	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGGGCTGATTGCTGG	NA	False	NA	-12	True	AATAAA	-13	NA	125471683	125437230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441441_125449379_125449475_125471536
ES.29546.27	chr6	-	2984	6	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	5253	junction_2	455.254829738247	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGGGCTGATTGCTGG	9966	False	NA	-12	True	AATAAA	-13	NA	125471754	125437230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125438273_125439076_125439167_125439289_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.28	chr6	-	1234	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2030.08794420943	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGGGCTGATTGCTGG	9966	False	NA	-12	True	AATAAA	-13	NA	125471754	125437230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438281_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.29	chr6	-	887	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	62	279	62	44	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTTAATGCTTTATT	NA	False	NA	NA	False	NA	NA	NA	125471692	125437507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29546.30	chr6	-	4588	1	Genic_Genomic	ENSMUSG00000030342.9	novel	NA	NA	NA	NA	-2311	-13910	mono-exon	FALSE	NA	NA	NA	NA	NA	953	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCAAGACACAAAAGTTCA	6151	False	NA	NA	False	NA	NA	NA	125457576	125452988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_125453000_125457600
ES.29546.31	chr6	-	5125	1	Intergenic	novelGene_24511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	951	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	125470415	125465290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125465300_125470400
ES.29546.6	chr6	-	2357	6	NIC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5197	junction_3	511.420609674659	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9966	False	NA	-10	True	AATAAA	-15	NA	125471754	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_125438273_125439076_125439167_125439289_125439389_125440647_125441451_125449371_125449475_125471536
ES.29546.8	chr6	-	1186	8	NNC	ENSMUSG00000030342.9	novel	1228	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2030.08794420943	1016	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9998	False	NA	-10	True	AATAAA	-15	NA	125471722	125437228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_125437690_125438188_125438273_125439086_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ES.29547.1	chr6	-	173	1	Intergenic	novelGene_24512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125519445	125519272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_125519300_125519400
ES.29548.1	chr6	+	1753	10	NNC	ENSMUSG00000001930.18	novel	610	3	NA	NA	-1019	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.9239797387826	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCCCGGGAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	125528891	125569132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125529000_125531415_125531471_125532312_125532478_125542745_125542849_125543092_125543302_125547462_125547588_125565379_125565597_125567141_125567265_125568112_125568225_125568596
ES.29548.10	chr6	+	7593	43	NNC	ENSMUSG00000001930.18	novel	8834	52	NA	NA	-12467	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.23718641144112	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGGCTGGTTGTGGAC	2454	False	NA	4	True	AATAAA	-18	NA	125568045	125663636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125568225_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635684_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.11	chr6	+	7319	41	NNC	ENSMUSG00000001930.18	novel	8834	52	NA	NA	-4336	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	5.95687627872193	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGGTTGTGGACTG	NA	False	NA	6	True	AATAAA	-20	NA	125576176	125663638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656320_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.2	chr6	+	8282	49	ISM	ENSMUSG00000001930.18	ENSMUST00000112254.8	8834	52	12913	2	-390	-2	3prime_fragment	TRUE	canonical	0	0	junction_3	6.59515684043981	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGGTTGTGGACTGTG	3111	False	NA	8	True	AATAAA	-22	NA	125542823	125663640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125542849_125543092_125543302_125547462_125547588_125565379_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.3	chr6	+	206	1	Intergenic	novelGene_24513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGTCATGTGCTTTAA	3235	False	NA	17	True	NA	NA	NA	125556201	125556407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_125556200_125556400
ES.29548.4	chr6	+	8103	47	NNC	ENSMUSG00000001930.18	novel	2686	19	NA	NA	18171	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.23788049894294	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGGTTGTGGACTG	8418	False	NA	6	True	AATAAA	-20	NA	125561384	125663638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125561567_125565379_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.5	chr6	+	1055	5	NNC	ENSMUSG00000001930.18	novel	1807	11	NA	NA	-15312	16	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.6154368727811	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTCAATCCGGTTTC	NA	False	NA	NA	False	NA	NA	NA	125565200	125569153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125565247_125565379_125565597_125567141_125567265_125568112_125568225_125568596
ES.29548.6	chr6	+	8224	47	NNC	ENSMUSG00000001930.18	novel	2686	19	NA	NA	-15312	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	6.35619608991568	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCAAGGCTGGTTGTGG	NA	False	NA	2	True	AATAAA	-16	NA	125565200	125663634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125565247_125565379_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650547_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.7	chr6	+	7967	47	NNC	ENSMUSG00000001930.18	novel	2686	19	NA	NA	-15312	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.13967850737423	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCTGGTTGTGGACTG	NA	False	NA	6	True	AATAAA	-20	NA	125565200	125663638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125565247_125565379_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125575444_125575582_125576214_125576354_125577592_125577694_125580286_125580483_125581092_125581309_125585064_125585306_125590997_125591093_125592922_125593084_125601501_125601606_125603197_125603337_125605303_125605439_125608059_125608207_125612517_125612659_125612830_125612945_125614342_125614500_125614929_125615089_125616225_125616362_125618997_125620377_125622599_125622717_125622804_125622946_125623215_125623360_125624707_125624873_125625744_125625789_125626079_125626258_125631994_125632216_125633578_125633772_125633962_125634305_125635678_125635879_125639927_125640031_125640466_125640542_125642056_125642162_125643541_125643748_125644433_125644584_125650808_125650920_125654853_125655035_125655726_125655768_125656206_125656324_125659689_125659789_125660479_125660609_125661055_125661096_125662772_125662871_125663313
ES.29548.8	chr6	+	1128	4	ISM	ENSMUSG00000001930.18	ENSMUST00000112253.6	2184	10	35314	302	-15273	-5	3prime_fragment	FALSE	canonical	3	17	junction_3	6.84754619472471	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCCCGGGAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	125565239	125569132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596
ES.29548.9	chr6	+	824	5	NNC	ENSMUSG00000001930.18	novel	2613	15	NA	NA	-15100	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	10.2591422643416	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTTCCCGGGAAGCCC	NA	False	NA	NA	False	NA	NA	NA	125565412	125569131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_125565597_125567141_125567265_125568112_125568225_125568596_125568644_125568773
ES.29549.1	chr6	+	168	1	Intergenic	novelGene_24514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACTGCATAT	NA	False	NA	NA	False	NA	NA	NA	126178476	126178644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_126178500_126178600
ES.2955.1	chr10	-	174	1	Intergenic	novelGene_2297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAGAAGT	5262	False	NA	NA	False	NA	NA	NA	62803108	62802934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62802900_62803100
ES.29550.1	chr6	-	2879	2	FSM	ENSMUSG00000038077.8	ENSMUST00000040751.6	5827	2	2943	5	-908	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGGCCTTGTCTTCTGC	NA	False	NA	-4	True	AATAAA	-13	NA	126714682	126685296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126685671_126712177
ES.29550.2	chr6	-	2617	1	FSM	ENSMUSG00000038077.8	ENSMUST00000112242.2	3464	1	844	3	844	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTCTTCGCCTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	126716270	126713653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126713700_126716300
ES.29551.1	chr6	-	172	1	Intergenic	novelGene_24515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAGTTCACTT	NA	False	NA	NA	False	NA	NA	NA	126753960	126753788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_126753800_126754000
ES.29552.1	chr6	+	217	2	Antisense	novelGene_ENSMUSG00000118420.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTAGATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	126785312	126785919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_126785428_126785817
ES.29553.1	chr6	-	205	1	Intergenic	novelGene_24516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGCGTGGATTGA	NA	False	NA	NA	False	NA	NA	NA	126786104	126785899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_126785900_126786100
ES.29554.1	chr6	-	1325	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-22	142	-11	133	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACAACTGTTCTCTG	NA	False	NA	85	True	ATTAAA	-19	NA	126826110	126798825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29554.10	chr6	-	1040	9	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	-1	40	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	424.624080069654	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAAGTGTCTTTCTTG	NA	False	NA	-8	True	ATTAAA	-18	NA	126826089	126798918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29554.11	chr6	-	1203	11	NNC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	391.005063905827	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAAGTGTCTTTCTTG	NA	False	NA	-8	True	ATTAAA	-18	NA	126826088	126798918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817596_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29554.12	chr6	-	1203	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-3	245	-3	30	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCGGTCTATTGCAAGT	NA	False	NA	-18	True	ATTAAA	-8	NA	126826091	126798928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29554.13	chr6	-	5474	1	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	79	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTAGTATGCTAATGT	NA	False	NA	NA	False	NA	NA	NA	126826088	126820614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126820600_126826100
ES.29554.14	chr6	-	985	3	FSM	ENSMUSG00000000399.11	ENSMUST00000200890.2	919	3	13	-79	2	79	multi-exon	FALSE	canonical	3	1175	junction_2	32	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTAGTATGCTAATGT	NA	False	NA	NA	False	NA	NA	NA	126826086	126820614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126821369_126821753_126821925_126826026
ES.29554.15	chr6	-	3711	2	ISM	ENSMUSG00000000399.11	ENSMUST00000200890.2	919	3	1389	-79	1378	79	3prime_fragment	FALSE	canonical	3	1239	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTAGTATGCTAATGT	NA	False	NA	NA	False	NA	NA	NA	126824710	126820614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_126821369_126821753
ES.29554.2	chr6	-	5172	4	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	12538	42	intron_retention	FALSE	canonical	3	1325	junction_1	10.1980390271856	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAAGTGTCTTTCTTGAC	NA	False	NA	-6	True	ATTAAA	-20	NA	126813550	126798916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126799153_126801898_126804599_126809434_126809512_126811391
ES.29554.5	chr6	-	5383	10	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	4	41	intron_retention	FALSE	canonical	3	1115	junction_6	86.6223533434958	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAAGTGTCTTTCTTGA	NA	False	NA	-7	True	ATTAAA	-19	NA	126826084	126798917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29554.8	chr6	-	1304	11	NNC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	208	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	391.130873238102	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAAGTGTCTTTCTTGA	NA	False	NA	-7	True	ATTAAA	-19	NA	126825880	126798917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126825725
ES.29554.9	chr6	-	4812	9	NIC	ENSMUSG00000000399.11	novel	1445	11	NA	NA	0	40	intron_retention	FALSE	canonical	3	1115	junction_5	83.6999850657095	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAAGTGTCTTTCTTG	NA	False	NA	-8	True	ATTAAA	-18	NA	126826088	126798918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ES.29555.1	chr6	+	3349	7	NNC	ENSMUSG00000030344.12	novel	3153	6	NA	NA	-3940	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCAGCATAAGTGTGG	4517	False	NA	NA	False	ATTAAA	-12	NA	126826120	126851263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_126826435_126831031_126831075_126833016_126833118_126834063_126834175_126837217_126837314_126841478_126843822_126850922
ES.29556.1	chr6	-	1153	5	ISM	ENSMUSG00000030345.17	ENSMUST00000078521.7	2252	15	36369	-10	-86	10	3prime_fragment	FALSE	canonical	2	4	junction_4	3.57071421427143	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCTATGCCAATCAGGA	NA	False	NA	-2	True	AATAAA	-27	NA	126862433	126852972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_126853514_126854122_126854302_126857187_126857318_126860989_126861051_126862191
ES.29557.1	chr6	+	175	1	Intergenic	novelGene_24517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126875050	126875225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_126875000_126875200
ES.29558.1	chr6	-	1891	6	ISM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	9546	-367	-1771	2	3prime_fragment	FALSE	canonical	3	112	junction_4	52.50752327048	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGGGACTTGGGTTTT	NA	False	NA	NA	False	TATAAA	-13	NA	126907004	126900010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955
ES.29558.10	chr6	-	6966	4	FSM	ENSMUSG00000030346.17	ENSMUST00000141212.2	1711	4	5	-5260	5	-3	multi-exon	FALSE	canonical	3	222	junction_1	21.4631467093403	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCATGCCTCGCCTA	5270	False	NA	-8	True	AATAAA	-18	NA	126916545	126900380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.12	chr6	-	4098	7	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	27	junction_4	85.8339805800839	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5256	False	NA	-9	True	AATAAA	-17	NA	126916559	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.13	chr6	-	1974	10	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	115.08075532822	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5269	False	NA	-9	True	AATAAA	-17	NA	126916546	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902083_126903321_126903481_126904500_126904654_126905103_126905191_126905272_126905332_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.14	chr6	-	1856	9	NNC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.9985718976372	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5293	False	NA	-9	True	AATAAA	-17	NA	126916522	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905211_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.15	chr6	-	3671	7	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-8	-4	intron_retention	FALSE	canonical	2	7	junction_3	115.189336890761	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5257	False	NA	-9	True	AATAAA	-17	NA	126916558	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126903481_126904500_126905239_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.16	chr6	-	1890	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	-23	4	-23	-4	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5242	False	NA	-9	True	AATAAA	-17	NA	126916573	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.17	chr6	-	1880	9	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	81.3460970176197	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5259	False	NA	-9	True	AATAAA	-17	NA	126916556	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.19	chr6	-	1940	9	NNC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	104.874627532116	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5248	False	NA	-9	True	AATAAA	-17	NA	126916567	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902083_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.2	chr6	-	4086	7	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	4	4	intron_retention	FALSE	canonical	3	195	junction_2	26.4491125665032	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTCGCCTAGTTCTCA	5269	False	NA	-1	True	AATAAA	-25	NA	126916546	126900373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.20	chr6	-	5680	6	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-10	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	122.334623063138	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5255	False	NA	-9	True	AATAAA	-17	NA	126916560	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126903481_126904500_126906330_126906616_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.21	chr6	-	2272	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	11	-4	intron_retention	FALSE	canonical	3	27	junction_5	79.496117220033	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5317	False	NA	-9	True	AATAAA	-17	NA	126916498	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.22	chr6	-	2313	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	4	-4	intron_retention	FALSE	canonical	3	195	junction_2	26.1635359277927	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5269	False	NA	-9	True	AATAAA	-17	NA	126916546	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.23	chr6	-	2395	9	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-11	-4	intron_retention	FALSE	canonical	0	0	junction_6	112.495486020551	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCATGCCTCGCCT	5295	False	NA	-9	True	AATAAA	-17	NA	126916520	126900381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911669_126911813_126912163_126912265_126912915_126912972_126916456
ES.29558.24	chr6	-	5954	5	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	222	junction_2	18.5926732881531	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGCATGCCTCGCC	5260	False	NA	-10	True	AATAAA	-16	NA	126916555	126900382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.25	chr6	-	1836	9	NNC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.3527416576503	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTGCATGCCTCGCC	5233	False	NA	-10	True	AATAAA	-16	NA	126916582	126900382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126901972_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.26	chr6	-	2003	10	NNC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	110.155557797055	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGTGCATGCCTCGC	5280	False	NA	-11	True	AATAAA	-15	NA	126916535	126900383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902083_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912163_126912265_126912915_126912972_126916456
ES.29558.28	chr6	-	1729	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	1	-54	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	87.9276140135876	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCAACTTGTTTCTG	5266	False	NA	-59	True	AGTAAA	-19	NA	126916549	126900431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.29	chr6	-	4137	6	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-9	-54	intron_retention	FALSE	canonical	2	3	junction_5	115.229162975351	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCAACTTGTTTCTG	5256	False	NA	-59	True	AGTAAA	-19	NA	126916559	126900431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916470
ES.29558.3	chr6	-	3735	7	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	81	junction_2	64.3490913343425	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5266	False	NA	-5	True	AATAAA	-21	NA	126916549	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.30	chr6	-	1603	9	NNC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	6	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.8379617700669	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACCATGTATGTACCTG	5271	False	NA	-7	True	AATAAA	-27	NA	126916544	126900630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912966_126916456
ES.29558.31	chr6	-	3423	1	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	1010	-261	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCATTGATACCATGTA	NA	False	NA	-15	True	AATAAA	-19	NA	126904061	126900638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126900600_126904100
ES.29558.32	chr6	-	1608	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	2	261	2	-261	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCATTGATACCATGTA	5267	False	NA	-15	True	AATAAA	-19	NA	126916548	126900638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.33	chr6	-	3468	7	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	4	-264	intron_retention	FALSE	canonical	3	81	junction_2	64.3490913343425	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCTCATTGATACCAT	5269	False	NA	-18	True	AATAAA	-16	NA	126916546	126900641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.34	chr6	-	1988	4	ISM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	11031	266	-286	-266	intron_retention	FALSE	canonical	3	195	junction_2	28.0752955856608	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGCTCATTGATACC	NA	False	NA	-20	True	AATAAA	-14	NA	126905519	126900643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500
ES.29558.36	chr6	-	3955	6	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-33	-267	intron_retention	FALSE	canonical	3	217	junction_2	21.8027521198586	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATGCTCATTGATAC	5232	False	NA	-21	True	AATAAA	-13	NA	126916583	126900644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.37	chr6	-	1592	9	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-2	-272	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	81.3460970176197	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTAAGCTATGCTCATT	5279	False	NA	-26	True	AATAAA	-8	NA	126916536	126900649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.38	chr6	-	3266	1	Genic_Genomic	ENSMUSG00000030346.17	novel	NA	NA	NA	NA	-8	-7652	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTACTTTCTAAT	5257	False	NA	NA	False	NA	NA	NA	126916558	126913292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_126913300_126916600
ES.29558.4	chr6	-	3614	7	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	217	junction_3	20.3059925473574	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5263	False	NA	-5	True	AATAAA	-21	NA	126916552	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.5	chr6	-	3168	8	NIC	ENSMUSG00000030346.17	novel	2233	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	81	junction_3	61.0543418035214	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5256	False	NA	-5	True	AATAAA	-21	NA	126916559	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29558.6	chr6	-	5932	5	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	27	junction_2	102.101665020704	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5294	False	NA	-5	True	AATAAA	-21	NA	126916521	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126907066_126911669_126911813_126912915_126912972_126916456
ES.29558.7	chr6	-	4115	7	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	-36	0	intron_retention	FALSE	canonical	2	3	junction_6	110.613064327863	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5229	False	NA	-5	True	AATAAA	-21	NA	126916586	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126907066_126911669_126911813_126912915_126912972_126916470
ES.29558.8	chr6	-	2964	2	NNC	ENSMUSG00000030346.17	novel	1838	2	NA	NA	-637	0	intron_retention	FALSE	canonical	1	1	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	NA	False	NA	-5	True	AATAAA	-21	NA	126903429	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_126901304_126901391
ES.29558.9	chr6	-	4189	6	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	217	junction_2	21.8027521198586	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	-5	True	AATAAA	-21	NA	126916550	126900377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ES.29559.1	chr6	+	4252	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	-9	-1742	-5	1742	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGGCAAATATTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	126916919	126954672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ES.29559.2	chr6	+	3264	2	NNC	ENSMUSG00000030347.7	novel	550	3	NA	NA	1	634	intron_retention	TRUE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCATTTCATTAGTACT	NA	False	NA	NA	False	NA	NA	NA	126916929	126920272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_126919726_126919804
ES.29559.3	chr6	+	2189	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	4	308	-1	45	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAATGTGCTTGTTGTT	NA	False	NA	NA	False	TATAAA	-40	NA	126916932	126952622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ES.29559.5	chr6	+	3310	12	NIC	ENSMUSG00000030347.7	novel	2501	14	NA	NA	1	6	intron_retention	FALSE	canonical	3	74	junction_9	15.8875178407609	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTGAAAATGTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	126916938	126952583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126951518_126952073
ES.29559.6	chr6	+	3795	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	12	-1306	3	1306	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTGCTGTATTATAT	NA	False	NA	NA	False	AATATA	-17	NA	126916940	126954236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ES.29559.8	chr6	+	2448	14	NIC	ENSMUSG00000030347.7	novel	2501	14	NA	NA	-18	61	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	30.9083393890222	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAAATTCTCCTGTTT	NA	False	NA	NA	False	NA	NA	NA	126916973	126952638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_126917274_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ES.29559.9	chr6	+	175	1	Intergenic	novelGene_24518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGACTTTT	7701	False	NA	NA	False	NA	NA	NA	126947699	126947874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_126947700_126947900
ES.2956.1	chr10	-	421	1	Intergenic	novelGene_2298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTATTTC	NA	False	NA	NA	False	NA	NA	NA	62819130	62818709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62818700_62819100
ES.2956.2	chr10	-	238	1	Intergenic	novelGene_2299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGGGGCTGGTGAGATG	NA	False	NA	NA	False	NA	NA	NA	62819131	62818893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62818900_62819100
ES.29560.1	chr6	-	176	1	Antisense	novelGene_ENSMUSG00000030347.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126944644	126944468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_126944500_126944600
ES.29561.1	chr6	-	3244	1	Antisense	novelGene_ENSMUSG00000030347.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126955984	126952740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_126952700_126956000
ES.29562.1	chr6	+	3525	1	Genic_Genomic	ENSMUSG00000097525.3	novel	NA	NA	NA	NA	-3385	-10031	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGAGACTATCCATA	968	False	NA	NA	False	NA	NA	NA	127073874	127077399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_127073900_127077400
ES.29563.1	chr6	+	4382	1	Intergenic	novelGene_24519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGGGATCGTTTCC	7881	False	NA	NA	False	NA	NA	NA	127080787	127085169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_127080800_127085200
ES.29564.1	chr6	-	3731	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-80	0	-73	0	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGTCTGTTCAGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	127086593	127062078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.10	chr6	-	4131	6	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	26	486	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	422.868773971311	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTTGGGATTTATTATT	NA	False	NA	65	True	NA	NA	NA	127086487	127064357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127076026_127078850_127086398
ES.29564.12	chr6	-	1377	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-80	2354	-73	411	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086593	127064432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.13	chr6	-	1179	5	NIC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	7	411	combination_of_known_splicesites	FALSE	canonical	1	30	junction_1	429.308164376127	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086506	127064432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_127065266_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.14	chr6	-	3129	5	NIC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	48	411	intron_retention	FALSE	canonical	3	974	junction_3	55.6641716007703	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086465	127064432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_127065266_127066155_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.15	chr6	-	1265	6	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	7	411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	415.791582406378	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127086506	127064432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127068171_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.16	chr6	-	5366	5	ISM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	3480	2354	3480	411	3prime_fragment	FALSE	canonical	3	974	junction_4	57.0498685362201	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTCAGAGTGAAGC	NA	False	NA	-10	True	AAGAAA	-39	NA	127083033	127064432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811
ES.29564.17	chr6	-	1337	7	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	48	385	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	501.496233507513	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACGCTGCGTATTTGCA	NA	False	NA	28	True	AAGAAA	-13	NA	127086465	127064458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127076026_127076141_127078811_127078850_127086398
ES.29564.18	chr6	-	4013	6	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	43	385	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	422.868773971311	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACGCTGCGTATTTGCA	NA	False	NA	28	True	AAGAAA	-13	NA	127086470	127064458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127076026_127078850_127086398
ES.29564.2	chr6	-	3704	7	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	488.607886414727	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTTAGGTCTGTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	127086470	127062081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127067542_127067642_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.20	chr6	-	1178	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	2473	0	292	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTGTGATGTCTAGGTG	NA	False	NA	-65	True	NA	NA	NA	127086513	127064551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.21	chr6	-	1049	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	28	2574	28	191	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCCATTATGTCTC	NA	False	NA	-13	True	NA	NA	NA	127086485	127064652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.3	chr6	-	3256	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	28	367	28	-367	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGGTGTTGCTCATTG	NA	False	NA	NA	False	TATAAA	-13	NA	127086485	127062445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.4	chr6	-	2748	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-45	948	-38	-948	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTGTCCAAGTGTTA	NA	False	NA	0	True	ATTAAA	-36	NA	127086558	127063026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.5	chr6	-	2747	7	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	28	-975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	488.607886414727	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACAATGGTTAGG	NA	False	NA	-27	True	ATTAAA	-9	NA	127086485	127063053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127067542_127067642_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.6	chr6	-	5433	6	NNC	ENSMUSG00000038028.10	novel	3651	6	NA	NA	28	-975	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	422.868773971311	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACAATGGTTAGG	NA	False	NA	-27	True	ATTAAA	-9	NA	127086485	127063053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127076026_127078850_127086398
ES.29564.8	chr6	-	1635	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-5	2021	2	744	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCGGGGGAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	127086518	127064099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29564.9	chr6	-	1467	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	-45	2229	-38	536	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGCCTCAGAATACAG	NA	False	NA	NA	False	NA	NA	NA	127086558	127064307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ES.29565.1	chr6	+	1661	6	NIC	ENSMUSG00000037997.13	novel	1725	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	23.591523901605	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATTTCTGGTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	127430577	127456018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127451198_127451275_127454806_127454880_127454961
ES.29565.10	chr6	+	3525	6	NNC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	21.8485697472397	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430598	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_127430786_127451198_127451275_127454721_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.12	chr6	+	3473	10	NNC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	16.718438110048	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGCTGCCTGTGTGTG	NA	False	NA	10	True	ATTAAA	-15	NA	127430598	127471201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381_127468468_127468804
ES.29565.13	chr6	+	3769	8	NNC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	20.2816897416243	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGCTGCCTGTGTGTG	NA	False	NA	10	True	ATTAAA	-15	NA	127430603	127471201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454721_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.14	chr6	+	3826	9	NNC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	18.1792292190841	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGCTGCCTGTGTGTG	NA	False	NA	10	True	ATTAAA	-15	NA	127430603	127471201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466867_127467041_127468381
ES.29565.15	chr6	+	1524	6	NIC	ENSMUSG00000037997.13	novel	1725	7	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	23.591523901605	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTGTTGCCCAAACT	NA	False	NA	NA	False	AATAAA	-16	NA	127430611	127455915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127451198_127451275_127454806_127454880_127454961
ES.29565.16	chr6	+	3873	9	NNC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	16.8444167307746	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430621	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454721_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.17	chr6	+	5129	8	ISM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-64	22	-7	-1	intron_retention	FALSE	canonical	3	34	junction_4	10.4040808320189	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430621	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888
ES.29565.18	chr6	+	3397	3	FSM	ENSMUSG00000037997.13	ENSMUST00000136945.3	1187	3	-2099	-111	520	2	multi-exon	FALSE	canonical	3	55	junction_1	4.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTTCTGGTATTTTT	2128	False	NA	NA	False	AATAAA	-15	NA	127449009	127456020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127451275_127454806_127454880_127454961
ES.29565.2	chr6	+	3852	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-107	1	-4	-1	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGCTTCTGGTTTC	NA	False	NA	32	True	ATTAAA	-37	NA	127430578	127471223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.3	chr6	+	3708	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	15.8513502933488	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430580	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.4	chr6	+	3475	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	6	-223	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	19.9632315080725	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACTTGTCCTTTCTCTG	NA	False	NA	NA	False	AATAAA	-12	NA	127430588	127470980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.5	chr6	+	3600	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	-96	242	7	-221	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCCTTTCTCTGCG	NA	False	NA	NA	False	AATAAA	-14	NA	127430589	127470982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.6	chr6	+	3576	7	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.2916277258227	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430591	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29565.7	chr6	+	1773	7	FSM	ENSMUSG00000037997.13	ENSMUST00000112193.8	1725	7	-46	-2	9	2	multi-exon	FALSE	canonical	3	34	junction_4	10.0443461155462	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATTTCTGGTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	127430591	127456020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961
ES.29565.8	chr6	+	3447	6	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.7125626251457	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCCTGTGTGTGC	NA	False	NA	11	True	ATTAAA	-16	NA	127430591	127471202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_127430786_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ES.29566.1	chr6	+	6632	1	Intergenic	novelGene_24520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	127491183	127497815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_127491200_127497800
ES.29567.1	chr6	+	3385	19	FSM	ENSMUSG00000061414.9	ENSMUST00000212051.2	7625	19	-7	4247	-7	-4247	multi-exon	TRUE	canonical	0	0	junction_1	0.558326423395605	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATACCTCTTTGGAAAAT	NA	False	NA	NA	False	CATAAA	-23	NA	127538293	127646964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127538385_127554848_127555055_127580792_127581036_127584152_127584265_127585525_127585710_127588348_127588496_127602797_127602889_127606701_127606798_127608762_127608951_127613495_127613568_127616126_127616173_127618169_127618277_127621412_127621747_127626807_127626941_127634606_127634689_127634772_127634888_127642019_127642122_127644548_127644626_127646005
ES.29568.1	chr6	-	156	1	Intergenic	novelGene_24521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAGATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	127595369	127595213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_127595200_127595400
ES.29569.1	chr6	-	2713	10	FSM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	7	4	7	-4	multi-exon	FALSE	canonical	1	4	junction_7	3.18948890986829	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAATGAGTACCTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	127746428	127665977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
ES.29569.2	chr6	-	2256	10	NNC	ENSMUSG00000030350.9	novel	2724	10	NA	NA	381	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	3.23560439523579	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAATGAGTACCTC	NA	False	NA	-4	True	AATAAA	-11	NA	127746054	127665979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709703_127745635
ES.29569.3	chr6	-	3203	13	NNC	ENSMUSG00000030350.9	novel	2724	10	NA	NA	7	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	5.84997625826141	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAATGAGTACCTC	NA	False	NA	-4	True	AATAAA	-11	NA	127746428	127665979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127700136_127700297_127700937_127701022_127701728_127701977_127703487_127703552_127706372_127706529_127709597_127709784_127745635
ES.29569.4	chr6	-	2726	10	NNC	ENSMUSG00000030350.9	novel	2724	10	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.66137265853401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAATGAGTACCTC	NA	False	NA	-4	True	AATAAA	-11	NA	127746400	127665979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688236_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
ES.29569.5	chr6	-	3246	6	ISM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	39930	6123	39930	-6123	internal_fragment	FALSE	canonical	1	4	junction_5	3.26190128606002	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCCTGCAAGCCCACC	NA	False	NA	NA	False	AATAAA	-30	NA	127706505	127672096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372
ES.2957.1	chr10	-	2887	2	Antisense	novelGene_ENSMUSG00000084985.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	666	False	NA	NA	False	NA	NA	NA	62839227	62834558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_62836178_62837959
ES.29570.1	chr6	+	1259	8	FSM	ENSMUSG00000030351.6	ENSMUST00000032501.6	5188	8	170	3759	-13	-3759	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGGCTTGGCGTGTGA	NA	False	NA	NA	False	AATAGA	-29	NA	127864721	127927181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_127864842_127889912_127890008_127900514_127900707_127915163_127915239_127916056_127916162_127920179_127920339_127920669_127920757_127926755
ES.29571.1	chr6	-	3966	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-47	-2514	-13	3	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTATTTAGTGGTGTG	6119	False	NA	1	True	AATAAA	-29	NA	128120570	127938355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ES.29571.10	chr6	-	3838	8	NIC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	-5	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	34.2374660515736	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAACCAGACTGTTATTT	6158	False	NA	-8	True	AATAAA	-20	NA	128120531	127938364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128060344_128060445_128120476
ES.29571.11	chr6	-	3933	8	NNC	ENSMUSG00000030352.16	novel	3819	8	NA	NA	-42678	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	33.9807868883435	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAACCAGACTGTTATTT	NA	False	NA	-8	True	AATAAA	-20	NA	128054646	127938364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128054476
ES.29571.12	chr6	-	3357	4	NNC	ENSMUSG00000030352.16	novel	3819	8	NA	NA	734	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.7262385167301	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAACCAGACTGTT	NA	False	NA	-12	True	AATAAA	-16	NA	127943046	127938368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942204_127942285_127942661_127942794_127942995
ES.29571.13	chr6	-	4005	10	NNC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.8952211790544	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAACCAGACTGTT	6137	False	NA	-12	True	AATAAA	-16	NA	128120552	127938368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128061612_128061683_128120476
ES.29571.14	chr6	-	3980	10	NNC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.8952211790544	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAACCAGACTGTT	6167	False	NA	-12	True	AATAAA	-16	NA	128120522	127938368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128101178_128101254_128120476
ES.29571.15	chr6	-	1540	10	NNC	ENSMUSG00000030352.16	novel	2584	9	NA	NA	4259	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.6690475583121	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGGTTTGAGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	128097020	127940826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128000883_128000995_128011128_128011209_128060344_128060445_128096992
ES.29571.16	chr6	-	1426	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	-29	8	5	-8	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTAGGGTTAGCTCTC	6137	False	NA	NA	False	NA	NA	NA	128120552	127940877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ES.29571.3	chr6	-	4028	10	NNC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.8952211790544	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	6129	False	NA	-2	True	AATAAA	-26	NA	128120560	127938358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128105936_128106012_128120476
ES.29571.4	chr6	-	4064	9	NNC	ENSMUSG00000030352.16	novel	2584	9	NA	NA	3725	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	34.5341769121547	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	NA	False	NA	-2	True	AATAAA	-26	NA	128109947	127938358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128109752
ES.29571.6	chr6	-	4030	10	NIC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	41.0558186730405	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	6149	False	NA	-5	True	AATAAA	-23	NA	128120540	127938361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128054989_128055090_128060344_128060445_128120476
ES.29571.7	chr6	-	4008	10	NNC	ENSMUSG00000030352.16	novel	1405	9	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.0713679359253	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	6182	False	NA	-5	True	AATAAA	-23	NA	128120507	127938361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128000883_128000995_128011128_128011209_128060344_128060445_128120476
ES.29571.8	chr6	-	3824	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	-8	3	-8	-3	multi-exon	FALSE	canonical	0	0	junction_7	35.3305094494713	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGACTGTTATTTAGT	6155	False	NA	-5	True	AATAAA	-23	NA	128120534	127938361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
ES.29571.9	chr6	-	3897	9	NNC	ENSMUSG00000030352.16	novel	2584	9	NA	NA	34499	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.8487804664668	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAACCAGACTGTTATTT	NA	False	NA	-8	True	AATAAA	-20	NA	128066780	127938364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128066746
ES.29572.1	chr6	+	179	1	Intergenic	novelGene_24522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATACAACTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	128152348	128152527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128152300_128152500
ES.29573.1	chr6	-	10310	6	Fusion	ENSMUSG00000056771.8_ENSMUSG00000107879.3	novel	3843	3	NA	NA	43	1	multi-exon	FALSE	canonical	0	0	junction_3	2.22710574513201	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCTTTGTGCATATTC	NA	False	NA	NA	False	NA	NA	NA	128177543	128146665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_128149276_128158875_128159043_128159699_128166683_128167505_128167762_128176569_128176675_128177354
ES.29574.1	chr6	+	193	1	Intergenic	novelGene_24523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAATACTGCTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	128184731	128184924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128184700_128184900
ES.29575.1	chr6	+	3174	1	Intergenic	novelGene_24526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCCATTTACTTATAG	NA	False	NA	NA	False	TATAAA	-45	NA	128213958	128217132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128214000_128217100
ES.29575.2	chr6	+	7465	1	Antisense	novelGene_ENSMUSG00000030353.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAAAGCAGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	128213958	128221423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_128214000_128221400
ES.29575.3	chr6	+	238	1	Intergenic	novelGene_24527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	128214149	128214387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128214100_128214400
ES.29576.1	chr6	+	156	1	Intergenic	novelGene_24529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTAG	NA	False	NA	NA	False	NA	NA	NA	128270357	128270513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128270400_128270500
ES.29577.1	chr6	+	174	1	Intergenic	novelGene_24530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATTAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	128287431	128287605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128287400_128287600
ES.29578.1	chr6	+	430	1	FSM	ENSMUSG00000053173.13	ENSMUST00000118863.2	567	1	210	-73	210	73	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAAGAGAAAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	128290529	128290959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128290500_128291000
ES.29579.1	chr6	-	3301	11	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	23595	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.0068325552698	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGCTCGTGTGATTT	4902	False	NA	-1	True	NA	NA	NA	128228945	128201247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202033_128203887_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884
ES.29579.10	chr6	-	3713	2	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	38945	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1658	False	NA	-4	True	NA	NA	NA	128213595	128201250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202021_128210652
ES.29579.11	chr6	-	5398	11	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	4348	0	intron_retention	FALSE	canonical	1	1	junction_10	33.1404586570554	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	5780	False	NA	-4	True	NA	NA	NA	128273353	128201250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128273238
ES.29579.12	chr6	-	1673	9	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	307	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.302283201037	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATATCTGCGCTCGTGT	1739	False	NA	-6	True	NA	NA	NA	128277394	128201252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202037_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.14	chr6	-	3679	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	26	-2	intron_retention	FALSE	canonical	0	0	junction_1	32.3201955644194	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATATCTGCGCTCGTGT	1383	False	NA	-6	True	NA	NA	NA	128277750	128201252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128203216_128205310_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.16	chr6	-	5647	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	3634	-4	intron_retention	FALSE	canonical	0	0	junction_11	28.7632111220146	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGATATCTGCGCTCGT	5066	False	NA	-8	True	NA	NA	NA	128274067	128201254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273828
ES.29579.17	chr6	-	5663	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	-12861	-5	intron_retention	FALSE	canonical	0	0	junction_11	28.7632111220146	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGATATCTGCGCTCG	9910	False	NA	-9	True	NA	NA	NA	128290647	128201255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128290391
ES.29579.19	chr6	-	1379	7	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	-5161	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.3825770659322	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	NA	False	NA	-10	True	NA	NA	NA	128257701	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202046_128223776_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128257671
ES.29579.2	chr6	-	5774	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	31	-3896	31	3	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGCTCGTGTGATTT	1388	False	NA	-1	True	NA	NA	NA	128277745	128201247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.20	chr6	-	1645	8	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	190	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.0070637245123	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1622	False	NA	-10	True	NA	NA	NA	128277511	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202025_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.21	chr6	-	1705	9	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	263	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.302283201037	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1695	False	NA	-10	True	NA	NA	NA	128277438	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202029_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.22	chr6	-	1314	6	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	219	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.4289233938742	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1651	False	NA	-10	True	NA	NA	NA	128277482	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202040_128223776_128223825_128228502_128228566_128228884_128228950_128247830_128248090_128277386
ES.29579.23	chr6	-	1507	7	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	276	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.4823583755869	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1708	False	NA	-10	True	NA	NA	NA	128277425	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202036_128223776_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.25	chr6	-	1332	6	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	326	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.5797817981957	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1758	False	NA	-10	True	NA	NA	NA	128277375	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202040_128223776_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.26	chr6	-	1605	7	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	184	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.4823583755869	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAGATATCTGCGCTC	1616	False	NA	-10	True	NA	NA	NA	128277517	128201256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202042_128223776_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.27	chr6	-	1968	1	NIC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	49095	-227	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAACTTGGCTTTTGTA	NA	False	NA	-5	True	AATAAA	-16	NA	128203445	128201477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128201500_128203400
ES.29579.28	chr6	-	2665	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	282	-1038	207	0	multi-exon	FALSE	canonical	3	25	junction_7	24.4991836598692	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1639	False	NA	-7	True	NA	NA	NA	128277494	128204105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.29	chr6	-	6209	4	NNC	ENSMUSG00000030353.16	novel	1909	11	NA	NA	40052	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	38.0555150040335	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGTGAGAACTTCAACT	2765	False	NA	-8	True	NA	NA	NA	128212488	128204106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128210448_128210661
ES.29579.3	chr6	-	2194	12	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	265	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.6590098045136	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCGCTCGTGTGATT	1697	False	NA	-2	True	NA	NA	NA	128277436	128201248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202037_128205523_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.30	chr6	-	3091	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	-16	1	-6	-1	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCGTGAGAACTTCAACT	1341	False	NA	-8	True	NA	NA	NA	128277792	128204106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.31	chr6	-	2775	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	4243	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	28.5309749031753	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCGTGAGAACTTCAAC	5675	False	NA	-9	True	NA	NA	NA	128273458	128204107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273238
ES.29579.32	chr6	-	2337	14	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	14	7	intron_retention	FALSE	canonical	0	0	junction_13	36.9896835129815	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTAGTTTGGCCTGTGTG	1371	False	NA	2	True	AATAAA	-26	NA	128277762	128205136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273812_128273966_128274263_128274417_128277257
ES.29579.33	chr6	-	1926	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	117	1033	42	5	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTAGTTTGGCCTGTG	1474	False	NA	0	True	AATAAA	-24	NA	128277659	128205138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.34	chr6	-	1638	11	NNC	ENSMUSG00000030353.16	novel	1909	11	NA	NA	4211	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	33.1404586570554	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGAGGAGCTAGTT	5643	False	NA	-9	True	AATAAA	-15	NA	128273490	128205147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128273238
ES.29579.35	chr6	-	1564	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	267	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	28.7632111220146	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTTCAGAGGAGCTA	1699	False	NA	-12	True	AATAAA	-12	NA	128277434	128205150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248090_128277386
ES.29579.36	chr6	-	2488	2	Intergenic	novelGene_24524	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAATCCTTGGGATTTTG	4089	False	NA	NA	False	AAAAAG	-35	NA	128211164	128208464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128210450_128210661
ES.29579.37	chr6	-	2829	1	Intergenic	novelGene_24525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAATCCTTGGGATTTTG	3960	False	NA	NA	False	AAAAAG	-35	NA	128211293	128208464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128208500_128211300
ES.29579.38	chr6	-	5259	1	Intergenic	novelGene_24528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTGGGTTTACCCTC	8043	False	NA	NA	False	NA	NA	NA	128236388	128231129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128231100_128236400
ES.29579.39	chr6	-	3808	1	Antisense	novelGene_ENSMUSG00000095262.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAACAATTTGGAAATTTT	8068	False	NA	NA	False	AATAAA	-41	NA	128271065	128267257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_128267300_128271100
ES.29579.4	chr6	-	1592	9	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	3374	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.5999923029549	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCGCTCGTGTGATT	4806	False	NA	-2	True	NA	NA	NA	128274327	128201248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202025_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128274263
ES.29579.5	chr6	-	5894	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	39	-2857	-36	2	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCGCTCGTGTGATT	1396	False	NA	-2	True	NA	NA	NA	128277737	128201248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.6	chr6	-	5683	12	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	4193	1	intron_retention	FALSE	canonical	1	1	junction_11	28.5309749031753	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCTGCGCTCGTGTGAT	5625	False	NA	-3	True	NA	NA	NA	128273508	128201249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128273238
ES.29579.7	chr6	-	1604	8	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	265	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.0070637245123	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1697	False	NA	-4	True	NA	NA	NA	128277436	128201250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202053_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ES.29579.8	chr6	-	5726	13	NNC	ENSMUSG00000030353.16	novel	3076	12	NA	NA	307	0	intron_retention	FALSE	canonical	0	0	junction_12	39.3262705523363	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1739	False	NA	-4	True	NA	NA	NA	128277394	128201250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128273812_128273966_128274263_128274417_128277257
ES.29579.9	chr6	-	1347	6	NNC	ENSMUSG00000030353.16	novel	1718	12	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.7990195960638	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1757	False	NA	-4	True	NA	NA	NA	128277376	128201250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128202053_128223776_128223825_128228502_128228566_128228884_128228950_128247835_128248086_128277257
ES.2958.1	chr10	-	2059	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	353	-779	-17	15	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5811	False	NA	0	True	AATAAA	-30	NA	62859643	62850427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
ES.2958.10	chr10	-	3094	6	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	3	5	intron_retention	FALSE	canonical	3	350	junction_5	56.3829761541549	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGCTACTTTTTATAT	5784	False	NA	-1	True	AATAAA	-20	NA	62859670	62851201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851955_62852185_62852322_62853000_62853117_62853302_62855307_62859498
ES.2958.11	chr10	-	1483	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	155.339612017439	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5788	False	NA	-2	True	AATAAA	-19	NA	62859666	62851202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859416
ES.2958.12	chr10	-	1491	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-63	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	157.438837820663	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5718	False	NA	-2	True	AATAAA	-19	NA	62859736	62851202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859523
ES.2958.13	chr10	-	1649	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	-241	760	82	4	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5540	False	NA	-2	True	AATAAA	-19	NA	62859914	62851202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.14	chr10	-	2904	7	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	7	4	intron_retention	FALSE	canonical	3	350	junction_6	55.4847326348028	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCTACTTTTTATA	5788	False	NA	-2	True	AATAAA	-19	NA	62859666	62851202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62855307_62859498
ES.2958.15	chr10	-	5592	9	ISM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	7	761	7	3	intron_retention	FALSE	canonical	3	179	junction_6	106.949754557923	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5788	False	NA	-3	True	AATAAA	-18	NA	62859666	62851203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171
ES.2958.16	chr10	-	1261	9	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	3	177	junction_7	135.128411150283	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTGCTACTTTTTAT	5788	False	NA	-3	True	AATAAA	-18	NA	62859666	62851203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62859498
ES.2958.17	chr10	-	6680	3	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	1326	2	intron_retention	FALSE	canonical	3	471	junction_2	22.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	7154	False	NA	-4	True	AATAAA	-17	NA	62858300	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185
ES.2958.18	chr10	-	3071	6	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	7	2	intron_retention	FALSE	canonical	3	56	junction_5	174.310756983039	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5788	False	NA	-4	True	AATAAA	-17	NA	62859666	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62855307_62859416
ES.2958.19	chr10	-	1324	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.79046190463	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5786	False	NA	-4	True	AATAAA	-17	NA	62859668	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851372_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.2	chr10	-	1468	5	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185.697334391208	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5788	False	NA	0	True	AATAAA	-30	NA	62859666	62850427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851629_62854626_62854678_62855171_62855307_62859498
ES.2958.20	chr10	-	1349	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	286	-2	-37	2	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5744	False	NA	-4	True	AATAAA	-17	NA	62859710	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
ES.2958.21	chr10	-	4845	6	ISM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	2579	-2	2209	2	intron_retention	FALSE	canonical	3	471	junction_3	16.0449368961053	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	8037	False	NA	-4	True	AATAAA	-17	NA	62857417	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302
ES.2958.22	chr10	-	4597	9	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	1046	762	999	2	3prime_fragment	FALSE	canonical	3	275	junction_6	79.8389002930276	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	6827	False	NA	-4	True	AATAAA	-17	NA	62858627	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171
ES.2958.23	chr10	-	1478	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	192.388752526663	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5785	False	NA	-4	True	AATAAA	-17	NA	62859669	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853006_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859416
ES.2958.24	chr10	-	4046	9	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	679	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	189.073398446212	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	6507	False	NA	-4	True	AATAAA	-17	NA	62858947	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62855993
ES.2958.26	chr10	-	1415	9	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	-66	2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	176.492917704932	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5715	False	NA	-4	True	AATAAA	-17	NA	62859739	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62859416
ES.2958.27	chr10	-	1454	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	-3	762	-3	2	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5778	False	NA	-4	True	AATAAA	-17	NA	62859676	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.28	chr10	-	3924	3	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	157	2	intron_retention	FALSE	canonical	3	56	junction_2	207.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5985	False	NA	-4	True	AATAAA	-17	NA	62859469	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851955_62852185_62855307_62859416
ES.2958.29	chr10	-	3859	4	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	350	junction_3	70.0967585238829	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTGCTACTTTTTA	5783	False	NA	-4	True	AATAAA	-17	NA	62859671	62851204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185_62855307_62859498
ES.2958.3	chr10	-	3786	3	FSM	ENSMUSG00000020069.17	ENSMUST00000119814.3	682	3	54	-3158	54	15	multi-exon	FALSE	canonical	3	177	junction_1	86.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGTGTTAGTTATT	5882	False	NA	0	True	AATAAA	-30	NA	62859572	62850427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62854005_62855171_62855307_62859498
ES.2958.30	chr10	-	3113	3	FSM	ENSMUSG00000020069.17	ENSMUST00000119814.3	682	3	-52	-2379	-5	0	multi-exon	FALSE	canonical	3	177	junction_1	86.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5776	False	NA	-6	True	AATAAA	-15	NA	62859678	62851206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62854005_62855171_62855307_62859498
ES.2958.31	chr10	-	5409	4	ISM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	2878	0	2508	0	intron_retention	FALSE	canonical	3	471	junction_3	19.4422220952236	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	8336	False	NA	-6	True	AATAAA	-15	NA	62857118	62851206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185
ES.2958.32	chr10	-	4881	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	169.113374200071	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5809	False	NA	-6	True	AATAAA	-15	NA	62859645	62851206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62855993
ES.2958.33	chr10	-	3187	5	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	350	junction_4	57.4037237468093	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5773	False	NA	-6	True	AATAAA	-15	NA	62859681	62851206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851955_62852185_62852322_62853000_62853117_62853302_62855307_62859498
ES.2958.34	chr10	-	8137	4	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	7	0	intron_retention	TRUE	non_canonical	0	0	junction_3	241.151404723257	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5788	False	NA	-9	True	AATAAA	-12	NA	62859666	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62858381_62858428
ES.2958.35	chr10	-	1538	9	NIC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	275	junction_5	81.2248999691597	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5776	False	NA	-9	True	AATAAA	-12	NA	62859678	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.36	chr10	-	1488	11	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	197.335779827177	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5784	False	NA	-9	True	AATAAA	-12	NA	62859670	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62855993_62856084_62859498
ES.2958.37	chr10	-	5001	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	193.276300655465	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5714	False	NA	-9	True	AATAAA	-12	NA	62859740	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853837_62854005_62854538_62854678_62855171_62855307_62855992
ES.2958.38	chr10	-	1819	7	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	177	junction_5	118.730320006681	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5786	False	NA	-9	True	AATAAA	-12	NA	62859668	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62854005_62855171_62855307_62859498
ES.2958.39	chr10	-	7180	5	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	471	junction_2	16.299923312703	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5784	False	NA	-9	True	AATAAA	-12	NA	62859670	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302
ES.2958.4	chr10	-	2271	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-10	13	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATGTTGTGTTAGTTA	5818	False	NA	-2	True	AATAAA	-28	NA	62859636	62850429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
ES.2958.40	chr10	-	1966	7	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	56	junction_6	178.883963010165	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5819	False	NA	-9	True	AATAAA	-12	NA	62859635	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851955_62852185_62852322_62853000_62853117_62853302_62854005_62855171_62855307_62859416
ES.2958.41	chr10	-	1525	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	158.574981290738	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5788	False	NA	-9	True	AATAAA	-12	NA	62859666	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854764_62855171_62855307_62859498
ES.2958.42	chr10	-	1895	7	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	56	junction_6	180.108917664346	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5792	False	NA	-9	True	AATAAA	-12	NA	62859662	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62854005_62855171_62855307_62859416
ES.2958.43	chr10	-	1843	9	NIC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	350	junction_8	61.8120892301821	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5814	False	NA	-9	True	AATAAA	-12	NA	62859640	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.44	chr10	-	768	5	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	208.888127953697	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5788	False	NA	-9	True	AATAAA	-12	NA	62859666	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851629_62854626_62854678_62855171_62855307_62859416
ES.2958.45	chr10	-	1599	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5710	False	NA	-9	True	AATAAA	-12	NA	62859744	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
ES.2958.46	chr10	-	4645	5	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	1509	0	intron_retention	FALSE	canonical	3	177	junction_4	132.09371673172	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	7337	False	NA	-9	True	AATAAA	-12	NA	62858117	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851955_62852185_62852322_62853000_62853117_62853302_62854005_62855171
ES.2958.47	chr10	-	2984	7	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	56	junction_6	163.740309297646	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5783	False	NA	-9	True	AATAAA	-12	NA	62859671	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62855307_62859416
ES.2958.48	chr10	-	3859	5	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	56	junction_4	192.130814811159	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5773	False	NA	-9	True	AATAAA	-12	NA	62859681	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62855307_62859416
ES.2958.49	chr10	-	1111	8	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	179.751302115575	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5816	False	NA	-9	True	AATAAA	-12	NA	62859638	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853864_62854005_62855171_62855307_62859498
ES.2958.5	chr10	-	2164	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	-3	13	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	144.393751788488	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATGTTGTGTTAGTTA	5825	False	NA	-2	True	AATAAA	-28	NA	62859629	62850429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853837_62854005_62854538_62854678_62855171_62855307_62859498
ES.2958.50	chr10	-	1779	9	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	-2799	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	202.139803106662	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	8792	False	NA	-9	True	AATAAA	-12	NA	62856662	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62855993
ES.2958.51	chr10	-	1275	9	NNC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	179.492339669413	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5788	False	NA	-9	True	AATAAA	-12	NA	62859666	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859523
ES.2958.52	chr10	-	5471	2	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	2761	0	intron_retention	FALSE	canonical	3	516	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	8589	False	NA	-9	True	AATAAA	-12	NA	62856865	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858
ES.2958.53	chr10	-	1402	8	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-8	0	intron_retention	FALSE	canonical	3	177	junction_6	120.298099124887	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGATGTTGCTACT	5773	False	NA	-9	True	AATAAA	-12	NA	62859681	62851209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
ES.2958.54	chr10	-	1501	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	181.902904503108	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCACTGATGTTGCTA	5788	False	NA	-11	True	AATAAA	-10	NA	62859666	62851211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853837_62854005_62854538_62854678_62855171_62855307_62859416
ES.2958.56	chr10	-	1289	2	Genic_Genomic	ENSMUSG00000020069.17	novel	2213	10	NA	NA	7	-4745	multi-exon	TRUE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	5788	False	NA	NA	False	NA	NA	NA	62859666	62858330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_62858389_62858435
ES.2958.6	chr10	-	3074	9	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	2426	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	189.073398446212	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATGTTGTGTTAGTTA	8254	False	NA	-2	True	AATAAA	-28	NA	62857200	62850429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62855993
ES.2958.7	chr10	-	2361	7	NIC	ENSMUSG00000020069.17	novel	1633	9	NA	NA	-8	12	intron_retention	FALSE	canonical	3	22	junction_4	184.308391923247	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATATGTTGTGTTAGTT	5820	False	NA	-3	True	AATAAA	-27	NA	62859634	62850430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853302_62854005_62855171_62855307_62859498
ES.2958.8	chr10	-	2204	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	7	2	7	-2	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGTCTGTCCTAGAAT	5788	False	NA	-17	True	AATAAA	-13	NA	62859666	62850444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ES.29580.1	chr6	-	223	1	Intergenic	novelGene_24531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTTAATCGTTTCCAG	9014	False	NA	NA	False	NA	NA	NA	128291820	128291597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128291600_128291800
ES.29581.1	chr6	+	3240	2	Antisense	novelGene_ENSMUSG00000001521.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGGGTCTGGAGAGA	4370	False	NA	NA	False	AAAAAG	-5	NA	128317707	128321160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_128318281_128318493
ES.29581.2	chr6	+	3153	3	Antisense	novelGene_ENSMUSG00000108267.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTCAGACACTATTCC	4370	False	NA	NA	False	NA	NA	NA	128317707	128327120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_128318281_128318493_128321037_128327083
ES.29582.1	chr6	+	2748	2	NNC	ENSMUSG00000097253.3	novel	2237	2	NA	NA	-807	-610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGTGGTGGTGGCGAGC	NA	False	NA	NA	False	NA	NA	NA	128332159	128335190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128333447_128333729
ES.29583.1	chr6	+	5041	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-642	253	-642	-253	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128339287	128352856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
ES.29583.11	chr6	+	3517	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-215	875	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAGCGAGAGGTGGAG	NA	False	NA	6	True	AATAAA	-20	NA	128339714	128351804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ES.29583.12	chr6	+	5487	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-214	-261	intron_retention	FALSE	canonical	3	86	junction_5	39.2247795829796	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCGTACACAGCCTGGAG	NA	False	NA	7	True	TATAAA	-20	NA	128339715	128352848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348976_128349496_128349567_128349739
ES.29583.13	chr6	+	4582	7	NNC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-214	-261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.1915617848175	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCGTACACAGCCTGGAG	NA	False	NA	7	True	TATAAA	-20	NA	128339715	128352848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348053_128349478_128349567_128349739
ES.29583.16	chr6	+	5117	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-206	-262	intron_retention	FALSE	canonical	3	121	junction_5	28.3646885326731	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339723	128352847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128349567_128349739
ES.29583.17	chr6	+	3011	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-206	1847	-206	333	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATAAATGTAAGCGTAT	NA	False	NA	NA	False	TATAAA	-28	NA	128339723	128351262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
ES.29583.18	chr6	+	6170	5	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-202	260	-202	-260	intron_retention	FALSE	canonical	3	167	junction_1	12.031209415516	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339727	128352849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919
ES.29583.20	chr6	+	4674	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-151	-260	intron_retention	FALSE	canonical	3	5	junction_5	73.7888880523348	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGTACACAGCCTGGAGG	NA	False	NA	8	True	TATAAA	-21	NA	128339778	128352849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493
ES.29583.23	chr6	+	5822	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-20	-253	intron_retention	FALSE	canonical	3	145	junction_5	20.1196421439349	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTGGAGGTGATTTA	NA	False	NA	15	True	TATAAA	-28	NA	128339909	128352856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128349567_128349739
ES.29583.25	chr6	+	4374	5	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-7	1861	-7	319	intron_retention	FALSE	canonical	3	167	junction_1	12.031209415516	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTGTCCTGTAACTAT	NA	False	NA	NA	False	TATAAA	-14	NA	128339922	128351248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919
ES.29583.26	chr6	+	4270	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	5	-262	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	75.372143395289	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339934	128352847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349739
ES.29583.27	chr6	+	4818	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	6	41	intron_retention	FALSE	canonical	3	5	junction_5	73.7888880523348	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGTTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	128339935	128353150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493
ES.29583.28	chr6	+	4574	8	NNC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	6	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.8127601445195	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTACCTCGTACACAGC	NA	False	NA	1	True	TATAAA	-14	NA	128339935	128352842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128349171_128349496_128349567_128349739
ES.29583.29	chr6	+	3518	7	NNC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	11	876	intron_retention	FALSE	canonical	0	0	junction_6	70.0057537317866	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCGAGAGGTGGAGC	NA	False	NA	7	True	AATAAA	-21	NA	128339940	128351805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348981_128349493
ES.29583.3	chr6	+	4752	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-395	-250	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGAGGTGATTTAATG	NA	False	NA	18	True	TATAAA	-31	NA	128339534	128352859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ES.29583.31	chr6	+	4351	8	NNC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	59	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.8127601445195	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACCTCGTACACAGCC	NA	False	NA	2	True	TATAAA	-15	NA	128339988	128352843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349472_128349567_128349739
ES.29583.32	chr6	+	4159	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	71	876	intron_retention	FALSE	canonical	3	86	junction_5	39.2247795829796	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCGAGAGGTGGAGC	NA	False	NA	7	True	AATAAA	-21	NA	128340000	128351805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348976_128349496_128349567_128349739
ES.29583.33	chr6	+	3181	9	NNC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	71	-262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	63.7039049038597	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128340000	128352847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739_128350726_128351863
ES.29583.35	chr6	+	2616	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	130	319	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTGTCCTGTAACTAT	NA	False	NA	NA	False	TATAAA	-14	NA	128340059	128351248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ES.29583.38	chr6	+	4344	1	FSM	ENSMUSG00000108176.2	ENSMUST00000203779.2	789	1	-3557	2	-3557	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	128350386	128354730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128350400_128354700
ES.29583.4	chr6	+	3634	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-231	976	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGCTTTGTCTGTT	NA	False	NA	107	True	NA	NA	NA	128339698	128351905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
ES.29583.5	chr6	+	3575	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-224	1301	-224	879	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGAGAGGTGGAGCCTG	NA	False	NA	10	True	AATAAA	-24	NA	128339705	128351808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
ES.29583.6	chr6	+	5145	5	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-221	1304	-221	876	intron_retention	FALSE	canonical	3	167	junction_1	12.031209415516	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCGAGAGGTGGAGC	NA	False	NA	7	True	AATAAA	-21	NA	128339708	128351805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919
ES.29583.7	chr6	+	4780	7	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	-220	265	-220	-265	intron_retention	FALSE	canonical	3	86	junction_6	42.0307427168892	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACCTCGTACACAGCCT	NA	False	NA	3	True	TATAAA	-16	NA	128339709	128352844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496
ES.29583.9	chr6	+	4969	6	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-216	878	intron_retention	FALSE	canonical	3	145	junction_5	20.1196421439349	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCGAGAGGTGGAGCCT	NA	False	NA	9	True	AATAAA	-23	NA	128339713	128351807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128349567_128349739
ES.29584.1	chr6	-	3394	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	1	-21	1	21	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGGGTTTCTCCTGTT	7492	False	NA	1	True	AATAAA	-39	NA	128332813	128298102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ES.29584.10	chr6	-	3287	11	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.7910124696992	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCGCTTTCCCAGA	7530	False	NA	-25	True	AATAAA	-13	NA	128332775	128298128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332743
ES.29584.11	chr6	-	3518	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.9394515496136	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCGCTTTCCCAGA	7504	False	NA	-25	True	AATAAA	-13	NA	128332801	128298128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128328156_128328319_128332700
ES.29584.12	chr6	-	3389	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.9394515496136	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTCGCTTTCCCAGA	7512	False	NA	-25	True	AATAAA	-13	NA	128332793	128298128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128324680_128324722_128332700
ES.29584.13	chr6	-	2063	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	3	604	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2136625841313	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGGCCTAGTTTGGCC	7504	False	NA	NA	False	NA	NA	NA	128332801	128299366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128299921_128299975_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ES.29584.14	chr6	-	227	1	Genic_Genomic	ENSMUSG00000001521.13	novel	NA	NA	NA	NA	-6320	55	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	128308830	128308603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_128308600_128308800
ES.29584.15	chr6	-	947	2	NNC	ENSMUSG00000001521.13	novel	1053	2	NA	NA	3	-144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGCACACGCCCTTT	7504	False	NA	NA	False	AATAAA	-38	NA	128332801	128319347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128320194_128332700
ES.29584.16	chr6	-	3634	2	Genic_Genomic	ENSMUSG00000001521.13	novel	3374	11	NA	NA	3	-9733	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAGAAAAGT	7530	False	NA	NA	False	NA	NA	NA	128332775	128328936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_128330453_128330657
ES.29584.2	chr6	-	3351	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	-11	20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2136625841313	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTGGGTTTCTCCTGT	7480	False	NA	0	True	AATAAA	-38	NA	128332825	128298103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128299898_128299951_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ES.29584.3	chr6	-	3315	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	-2	20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2136625841313	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTGGGTTTCTCCTGT	7515	False	NA	0	True	AATAAA	-38	NA	128332790	128298103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128299915_128299969_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ES.29584.5	chr6	-	3343	12	NNC	ENSMUSG00000001521.13	novel	3374	11	NA	NA	-11	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.2136625841313	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACCATCCCTTGGGTTT	7480	False	NA	-7	True	AATAAA	-31	NA	128332825	128298110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128299903_128299957_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ES.29585.1	chr6	-	1784	4	NNC	ENSMUSG00000048668.17	novel	1108	3	NA	NA	-21	573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.571566668223	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCAGTGTGACTTTGGC	453	False	NA	NA	False	NA	NA	NA	128339852	128333389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128333448_128333730_128335157_128336068_128336318_128339801
ES.29585.11	chr6	-	1319	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	3	39	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGCCTCGAACTAA	434	False	NA	-4	True	TATAAA	-16	NA	128339871	128334283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
ES.29585.12	chr6	-	4653	2	FSM	ENSMUSG00000048668.17	ENSMUST00000155573.3	3697	2	-307	-649	-18	38	multi-exon	FALSE	canonical	3	340	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCTGCCTCGAACTA	456	False	NA	-5	True	TATAAA	-15	NA	128339849	128334284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068
ES.29585.13	chr6	-	1580	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	25	-21	25	21	multi-exon	FALSE	canonical	3	41	junction_2	149.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTATGCTTATTAG	499	False	NA	14	True	NA	NA	NA	128339806	128334301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068_128336318_128339330
ES.29585.15	chr6	-	1480	5	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	138.179231435118	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGCCTCGTGCCCATC	469	False	NA	-9	True	AATAAA	-39	NA	128339836	128334324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330_128339568_128339801
ES.29585.16	chr6	-	5554	1	Genic_Genomic	ENSMUSG00000048668.17	novel	NA	NA	NA	NA	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	424	False	NA	-12	True	AATAAA	-36	NA	128339881	128334327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_128334300_128339900
ES.29585.17	chr6	-	3941	3	NIC	ENSMUSG00000048668.17	novel	1108	3	NA	NA	-15	-12	intron_retention	FALSE	canonical	3	59	junction_2	140.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCGTTGTCAGTAATGC	459	False	NA	-24	True	AATAAA	-24	NA	128339846	128334339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128335157_128336068_128339148_128339801
ES.29585.18	chr6	-	1250	4	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-21	-15	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	147.447165678648	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGCCGTTGTCAGTAA	453	False	NA	-27	True	AATAAA	-21	NA	128339852	128334342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128335157_128336068_128336318_128339011_128339148_128339801
ES.29585.19	chr6	-	1637	4	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	3	-15	intron_retention	FALSE	canonical	2	4	junction_3	147.844512918133	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGCCGTTGTCAGTAA	477	False	NA	-27	True	AATAAA	-21	NA	128339828	128334342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128335157_128336068_128336318_128339020_128339568_128339801
ES.29585.2	chr6	-	2130	4	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	35	560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.540973557209	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTGGATTCAACATCA	565	False	NA	NA	False	NA	NA	NA	128339740	128333402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128333448_128333730_128335157_128336068_128336318_128339330
ES.29585.20	chr6	-	4350	3	NNC	ENSMUSG00000048668.17	novel	1108	3	NA	NA	-7	-15	intron_retention	FALSE	canonical	2	4	junction_2	168	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGCCGTTGTCAGTAA	467	False	NA	-27	True	AATAAA	-21	NA	128339838	128334342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128335157_128336068_128339568_128339801
ES.29585.23	chr6	-	2529	1	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	1438	619	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCATGGGGCTGCCGTT	2201	False	NA	NA	False	AATAAA	-25	NA	128338104	128335575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128335600_128338100
ES.29585.24	chr6	-	3415	1	Genic_Genomic	ENSMUSG00000048668.17	novel	NA	NA	NA	NA	-7	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAAAGGAAGCT	424	False	NA	NA	False	NA	NA	NA	128339881	128336466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_128336500_128339900
ES.29585.3	chr6	-	4308	3	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	59	junction_2	140.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	469	False	NA	NA	False	CATAAA	-34	NA	128339836	128333962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128335157_128336068_128339148_128339801
ES.29585.4	chr6	-	4977	2	FSM	ENSMUSG00000048668.17	ENSMUST00000155573.3	3697	2	-310	-970	-21	-1	multi-exon	FALSE	canonical	3	340	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGCCTGTCTCAGTGGT	453	False	NA	NA	False	CATAAA	-33	NA	128339852	128333963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068
ES.29585.5	chr6	-	1616	4	NNC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.015286315047	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGCCTGTCTCAGTGG	453	False	NA	NA	False	CATAAA	-32	NA	128339852	128333964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128335157_128336068_128336318_128339020_128339145_128339801
ES.29585.6	chr6	-	1491	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-20	-363	-20	-2	multi-exon	FALSE	canonical	3	139	junction_2	100.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTGCCTGTCTCAGTGG	454	False	NA	NA	False	CATAAA	-32	NA	128339851	128333964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068_128336318_128339801
ES.29585.7	chr6	-	2021	4	FSM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	-9	3	-9	-3	multi-exon	FALSE	canonical	3	13	junction_3	145.265274584121	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGCCTGTCTCAGTG	521	False	NA	NA	False	CATAAA	-31	NA	128339784	128333965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330
ES.29585.9	chr6	-	1534	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	-381	-45	-338	40	multi-exon	FALSE	canonical	3	139	junction_2	100.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGCCTCGAACTAAT	93	False	NA	-3	True	TATAAA	-17	NA	128340212	128334282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128335157_128336068_128336318_128339801
ES.29586.1	chr6	-	171	1	Intergenic	novelGene_24532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	128343897	128343726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128343700_128343900
ES.29587.1	chr6	-	190	1	Intergenic	novelGene_24533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTATTTTTTAAAAAGAT	NA	False	NA	1	True	AATACA	-9	NA	128365591	128365401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128365400_128365600
ES.29588.1	chr6	+	201	1	Intergenic	novelGene_24534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	128373966	128374167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128374000_128374200
ES.29589.1	chr6	-	153	1	Antisense	novelGene_ENSMUSG00000001520.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	128382821	128382668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_128382700_128382800
ES.2959.1	chr10	-	219	1	Intergenic	novelGene_2301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8480	False	NA	NA	False	NA	NA	NA	62871331	62871112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62871100_62871300
ES.29590.1	chr6	+	185	1	Intergenic	novelGene_24535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAGTATTAAGA	NA	False	NA	NA	False	NA	NA	NA	128391647	128391832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128391600_128391800
ES.29591.1	chr6	-	6105	10	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-5	2332	intron_retention	FALSE	canonical	3	237	junction_3	20.2435784666596	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATACTGATCTAGGCT	NA	False	NA	NA	False	NA	NA	NA	128401837	128384074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128394676_128401680
ES.29591.10	chr6	-	5091	8	NIC	ENSMUSG00000001518.13	novel	3191	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	237	junction_1	18.8062082671589	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTCTCCAATCTGG	NA	False	NA	-2	True	AATAAA	-22	NA	128401891	128386408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393262_128394579_128394676_128401680
ES.29591.11	chr6	-	2300	12	NNC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	16	-3	intron_retention	FALSE	canonical	1	1	junction_1	79.5182810729293	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401859	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128387399_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.12	chr6	-	3035	10	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	13	junction_7	82.9016969550364	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401883	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
ES.29591.13	chr6	-	4912	8	NIC	ENSMUSG00000001518.13	novel	1394	11	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	5	junction_7	93.4702833929106	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401884	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393262_128401680
ES.29591.14	chr6	-	2461	10	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	13	junction_7	81.9540672316052	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401883	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
ES.29591.15	chr6	-	2146	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	13	junction_8	79.0465685529739	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401892	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
ES.29591.16	chr6	-	3769	8	NIC	ENSMUSG00000001518.13	novel	3191	10	NA	NA	18	-3	intron_retention	FALSE	canonical	3	237	junction_1	21.5851422822954	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCAGCTCTCCAATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	128401857	128386409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128388646_128389661_128389754_128389919_128389974_128390065_128390637_128391107_128391248_128392858_128393262_128394579_128394676_128401680
ES.29591.17	chr6	-	2603	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	17	-5	intron_retention	FALSE	canonical	3	237	junction_3	19.6265126805554	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCTCTCCAATC	NA	False	NA	-5	True	AATAAA	-19	NA	128401858	128386411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.18	chr6	-	4271	9	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	0	-5	intron_retention	FALSE	canonical	3	237	junction_3	19.3713706278105	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCTCTCCAATC	NA	False	NA	-5	True	AATAAA	-19	NA	128401881	128386411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389974_128390065_128390164_128390487_128390637_128391107_128393262_128394579_128394676_128401680
ES.29591.19	chr6	-	2258	11	NNC	ENSMUSG00000001518.13	novel	1394	11	NA	NA	-39	-6	intron_retention	FALSE	canonical	0	0	junction_7	104.463390716557	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGCAGCTCTCCAAT	NA	False	NA	-6	True	AATAAA	-18	NA	128401933	128386412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390629_128391098_128391248_128392858_128393028_128393219_128393262_128401680
ES.29591.2	chr6	-	4218	13	NNC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-1	2195	intron_retention	FALSE	non_canonical	0	0	junction_1	76.4018524353667	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGTATAGTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	128401877	128384211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128384603_128384882_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.20	chr6	-	2280	12	NNC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	15	-7	intron_retention	FALSE	canonical	0	0	junction_7	78.0731803348839	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGATGCAGCTCTCCAA	NA	False	NA	-7	True	AATAAA	-17	NA	128401860	128386413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390629_128391098_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.21	chr6	-	3554	21	Fusion	ENSMUSG00000001518.13_ENSMUSG00000030357.11	novel	2320	12	NA	NA	34	-9	intron_retention	FALSE	canonical	1	2	junction_11	2656.03260710406	2639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGATGCAGCTCTCC	9303	False	NA	-9	True	AATAAA	-15	NA	128415606	128386415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128407791_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.22	chr6	-	3291	9	NIC	ENSMUSG00000001518.13	novel	1394	11	NA	NA	0	-10	intron_retention	FALSE	canonical	1	5	junction_8	87.4749071162696	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTGATGCAGCTCTC	NA	False	NA	-10	True	AATAAA	-14	NA	128401881	128386416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393262_128401680
ES.29591.24	chr6	-	3553	19	Fusion	ENSMUSG00000001518.13_ENSMUSG00000030357.11	novel	2320	12	NA	NA	18	-10	intron_retention	FALSE	canonical	1	2	junction_10	2617.23849908852	2639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTGATGCAGCTCTC	9287	False	NA	-10	True	AATAAA	-14	NA	128415622	128386416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128407791_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.25	chr6	-	4805	10	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	1	-10	intron_retention	FALSE	canonical	3	237	junction_2	18.8325958557674	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTGATGCAGCTCTC	NA	False	NA	-10	True	AATAAA	-14	NA	128401880	128386416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.26	chr6	-	3920	10	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	16	-79	intron_retention	FALSE	canonical	3	237	junction_3	18.5319210759552	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTCACAGTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	128401859	128386574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393262_128394579_128394676_128401680
ES.29591.27	chr6	-	2153	12	NNC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-1	-84	intron_retention	FALSE	canonical	1	1	junction_1	79.5182810729293	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGATGCTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	128401882	128386579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128387399_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.28	chr6	-	4183	9	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	8	-84	intron_retention	FALSE	canonical	3	237	junction_6	19.6433035663556	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGATGCTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	128401824	128386579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393262_128394579_128394676_128401680
ES.29591.29	chr6	-	2015	11	FSM	ENSMUSG00000001518.13	ENSMUST00000203374.3	1394	11	-26	-595	17	-84	multi-exon	FALSE	canonical	1	5	junction_10	80.3029264722027	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGATGCTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	128401858	128386579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128401680
ES.29591.3	chr6	-	3899	2	NNC	ENSMUSG00000001518.13	novel	353	2	NA	NA	-742	2195	intron_retention	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGTATAGTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	128388390	128384211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128384603_128384882
ES.29591.30	chr6	-	5138	8	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	15	-84	intron_retention	FALSE	canonical	3	237	junction_2	19.8617671902167	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGATGCTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	128401860	128386579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390637_128391107_128393262_128394579_128394676_128401680
ES.29591.31	chr6	-	2075	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	72	173	10	-84	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGATGCTCACAGTTT	NA	False	NA	NA	False	NA	NA	NA	128401822	128386579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.32	chr6	-	1953	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	3	364	2	-275	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTCTGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	128401891	128386770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.33	chr6	-	1607	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	34	679	15	89	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGTGGCTCCTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	128401860	128387085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.34	chr6	-	1165	10	FSM	ENSMUSG00000001518.13	ENSMUST00000142615.4	3191	10	56	1970	7	83	multi-exon	FALSE	canonical	3	237	junction_1	20.4601389035025	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTCACTCCTGTTCAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	128401825	128388465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.35	chr6	-	2159	1	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-3394	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGACCTCTAAGAATAGA	NA	False	NA	NA	False	NA	NA	NA	128394734	128392575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128392600_128394700
ES.29591.36	chr6	-	340	1	Intergenic	novelGene_24536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128396305	128395965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128396000_128396300
ES.29591.37	chr6	-	4117	8	Fusion	ENSMUSG00000001518.13_ENSMUSG00000030357.11	novel	2678	9	NA	NA	40	191	intron_retention	FALSE	non_canonical	0	0	junction_1	1966.29415242927	2605	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAAAATGTAGTTGAGA	9309	False	NA	39	True	NA	NA	NA	128415600	128399555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_128400440_128406847_128407844_128409384_128409625_128410068_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.38	chr6	-	2984	8	NNC	ENSMUSG00000030357.11	novel	891	8	NA	NA	23	2941	intron_retention	TRUE	canonical	0	0	junction_1	1944.62877208595	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACCAAAAAAAAAAAAAAGA	9292	False	NA	NA	False	NA	NA	NA	128415617	128403756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128404428_128408814_128409625_128410068_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.39	chr6	-	2902	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	48	-733	48	365	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTCAGAGGTCACTGTG	9317	False	NA	NA	False	GGGGCT	-30	NA	128415592	128406332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.4	chr6	-	2710	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	3	-393	2	393	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGTGTAGAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	128401891	128386013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.40	chr6	-	3287	9	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	23	214	intron_retention	FALSE	canonical	3	5250	junction_6	206.964217921843	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTCCAGTGCTGCT	9292	False	NA	NA	False	NA	NA	NA	128415617	128406483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.41	chr6	-	2770	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	29	-582	29	214	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTCCAGTGCTGCT	9298	False	NA	NA	False	NA	NA	NA	128415611	128406483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.42	chr6	-	3544	7	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	77	198	intron_retention	FALSE	canonical	3	5250	junction_4	237.755067710916	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	9346	False	NA	NA	False	NA	NA	NA	128415563	128406499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128409625_128410068_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.43	chr6	-	2268	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	-29	-22	-29	22	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGAGTTCTCAGGTGGG	9240	False	NA	1	True	AATAAA	-38	NA	128415669	128407043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.44	chr6	-	3754	9	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	5250	junction_6	173.962594758184	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9273	False	NA	-21	True	AATAAA	-16	NA	128415636	128407065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.45	chr6	-	3093	7	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	5250	junction_4	216.04294840507	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9287	False	NA	-21	True	AATAAA	-16	NA	128415622	128407065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.46	chr6	-	2152	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	52	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1756.62783708579	2421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGGGTGTCAGGCAA	9321	False	NA	-25	True	AATAAA	-12	NA	128415588	128407069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412811_128413532_128413678_128415368
ES.29591.47	chr6	-	2103	11	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1682.35336359518	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGGGTGTCAGGCAA	9288	False	NA	-25	True	AATAAA	-12	NA	128415621	128407069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407718_128407808_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.49	chr6	-	2116	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	78	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1762.96384142524	2421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCTGGGTGTCAGGC	9347	False	NA	-27	True	AATAAA	-10	NA	128415562	128407071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411284_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.5	chr6	-	5189	20	Fusion	ENSMUSG00000001518.13_ENSMUSG00000030357.11	novel	2320	12	NA	NA	19	0	intron_retention	FALSE	canonical	1	2	junction_10	2665.60209140361	2639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	9288	False	NA	0	True	AATAAA	-24	NA	128415621	128386406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393028_128393219_128393262_128394579_128394676_128407791_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.50	chr6	-	2131	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1749.58543943317	2421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCTGGGTGTCAGGC	9288	False	NA	-27	True	AATAAA	-10	NA	128415621	128407071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413626_128415377
ES.29591.51	chr6	-	2196	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1747.62809276381	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCTGGGTGTCAGGC	9290	False	NA	-27	True	AATAAA	-10	NA	128415619	128407071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409378_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.52	chr6	-	2726	8	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	-36	-6	intron_retention	FALSE	canonical	1	14	junction_7	1944.96867400407	2420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCTGGGTGTCAGGC	9770	False	NA	-27	True	AATAAA	-10	NA	128415139	128407071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415030
ES.29591.53	chr6	-	3244	7	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	10	-11	intron_retention	FALSE	canonical	3	5250	junction_4	232.840193170242	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9279	False	NA	-32	True	AATAAA	-5	NA	128415630	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128410255_128410488_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.55	chr6	-	2003	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	54	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1762.30407544243	2421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9323	False	NA	-32	True	AATAAA	-5	NA	128415586	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410106_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.56	chr6	-	2158	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	46	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1771.45565448376	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9315	False	NA	-32	True	AATAAA	-5	NA	128415594	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411830_128412672_128412820_128413532_128413678_128415368
ES.29591.58	chr6	-	2151	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	48	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1762.96384142524	2421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9317	False	NA	-32	True	AATAAA	-5	NA	128415592	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411274_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.6	chr6	-	2316	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	3	1	2	-1	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCTCTCCAATCTGGA	NA	False	NA	-1	True	AATAAA	-23	NA	128401891	128386407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.62	chr6	-	2403	9	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	37	-11	intron_retention	FALSE	canonical	3	5250	junction_6	207.002075774616	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9306	False	NA	-32	True	AATAAA	-5	NA	128415603	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128409625_128410068_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.63	chr6	-	2195	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	19	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1769.28963216008	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	9288	False	NA	-32	True	AATAAA	-5	NA	128415621	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411706_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.66	chr6	-	1588	7	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	2834	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2078.33563218264	2419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAAAACCTGGGTGT	1925	False	NA	-32	True	AATAAA	-5	NA	128411782	128407076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410767_128411282_128411425_128411714
ES.29591.67	chr6	-	1687	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	-28	558	-28	-558	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGATGGCTTTGG	9241	False	NA	NA	False	NA	NA	NA	128415668	128407623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.68	chr6	-	6417	4	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	23	-560	intron_retention	FALSE	canonical	3	5250	junction_3	91.46705539276	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGGATGATGGCTTT	9292	False	NA	NA	False	NA	NA	NA	128415617	128407625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128409625_128410068_128411425_128411714_128411836_128412676
ES.29591.69	chr6	-	2137	9	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	30	-561	intron_retention	FALSE	canonical	3	5250	junction_6	206.964217921843	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTTGGATGATGGCTT	9299	False	NA	NA	False	NA	NA	NA	128415610	128407626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.7	chr6	-	3895	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	16	-1	intron_retention	FALSE	canonical	3	237	junction_3	17.8941331167509	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCTCTCCAATCTGGA	NA	False	NA	-1	True	AATAAA	-23	NA	128401859	128386407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393028_128393219_128393262_128394579_128394676_128401680
ES.29591.71	chr6	-	1744	9	FSM	ENSMUSG00000030357.11	ENSMUST00000139448.7	2678	9	4	930	4	-562	multi-exon	FALSE	canonical	3	5250	junction_6	206.026697299161	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTGGATGATGGCT	9273	False	NA	NA	False	NA	NA	NA	128415636	128407627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.77	chr6	-	3852	5	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	1	-1187	intron_retention	FALSE	canonical	3	5250	junction_2	242.612860335144	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAGTTAGCATATAAA	9270	False	NA	NA	False	NA	NA	NA	128415639	128408252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.78	chr6	-	4965	3	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	19	-1187	intron_retention	FALSE	canonical	3	5708	junction_1	66	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAGTTAGCATATAAA	9288	False	NA	NA	False	NA	NA	NA	128415621	128408252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128412820_128413532_128413678_128415368
ES.29591.79	chr6	-	3376	6	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	33	-1187	intron_retention	FALSE	canonical	3	5250	junction_3	218.551595738855	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAGTTAGCATATAAA	9302	False	NA	NA	False	NA	NA	NA	128415607	128408252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128409625_128410068_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.8	chr6	-	2126	9	NIC	ENSMUSG00000001518.13	novel	1394	11	NA	NA	2	-1	intron_retention	FALSE	canonical	1	5	junction_8	114.13150310059	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCTCTCCAATCTGGA	NA	False	NA	-1	True	AATAAA	-23	NA	128401891	128386407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128401680
ES.29591.80	chr6	-	7367	1	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	21	-1187	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTAGTTAGCATATAAA	9290	False	NA	NA	False	NA	NA	NA	128415619	128408252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128408300_128415600
ES.29591.81	chr6	-	3194	7	NIC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	19	-1223	intron_retention	FALSE	canonical	3	5250	junction_4	198.46550217999	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9288	False	NA	NA	False	NA	NA	NA	128415621	128408288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.82	chr6	-	4088	4	NIC	ENSMUSG00000030357.11	novel	2678	9	NA	NA	19	-1223	intron_retention	FALSE	canonical	3	5250	junction_1	252.825807402822	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9288	False	NA	NA	False	NA	NA	NA	128415621	128408288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128411836_128412676_128412820_128413532_128413678_128415368
ES.29591.9	chr6	-	3205	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	237	junction_2	20.6225604617855	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTCTCCAATCTGG	NA	False	NA	-2	True	AATAAA	-22	NA	128401883	128386408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ES.29592.1	chr6	+	1434	5	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2.91547594742265	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCCCAAATTGTTATTCA	NA	False	NA	NA	False	AATGAA	-11	NA	128415751	128480241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128416351_128416477_128416660_128465853_128465987_128479128_128479327_128479919
ES.29592.10	chr6	+	230	1	Intergenic	novelGene_24540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCCCCACCTCCCACT	NA	False	NA	NA	False	NA	NA	NA	128457370	128457600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128457400_128457600
ES.29592.11	chr6	+	6347	1	Antisense	novelGene_ENSMUSG00000030359.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATGTTTTCTCTCATT	5773	False	NA	NA	False	NA	NA	NA	128472239	128478586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_128472200_128478600
ES.29592.2	chr6	+	3832	6	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	1676	-178	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.36867333123626	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGTGTCTGATTTCAG	NA	False	NA	NA	False	AAGAAA	-25	NA	128417977	128480066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128418022_128418399_128419319_128421007_128423399_128465853_128465987_128479128_128479327_128479919
ES.29592.3	chr6	+	132	1	Intergenic	novelGene_24537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	128420786	128420918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128420800_128420900
ES.29592.4	chr6	+	4052	1	Antisense	novelGene_ENSMUSG00000107505.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAGTCAAGACTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	128422501	128426553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_128422500_128426600
ES.29592.5	chr6	+	934	4	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	-7155	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.79869268479038	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGTTATTCACTTGT	4582	False	NA	NA	False	AATGAA	-16	NA	128443397	128480246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128443654_128465853_128466007_128479128_128479327_128479919
ES.29592.6	chr6	+	1468	4	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	-7152	22692	intron_retention	FALSE	canonical	0	0	junction_3	2.05480466765633	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGGAAGAATCACTAAT	4585	False	NA	NA	False	NA	NA	NA	128443400	128502936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128443615_128465853_128466007_128500730_128500945_128502049
ES.29592.7	chr6	+	642	2	NNC	ENSMUSG00000059659.8	novel	677	2	NA	NA	-7147	-1667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGTCTGGTCACAGA	4590	False	NA	NA	False	AATAAA	-18	NA	128443405	128450913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128443567_128450432
ES.29592.8	chr6	+	1465	2	NNC	ENSMUSG00000059659.8	novel	677	2	NA	NA	-7142	-1667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGTCTGGTCACAGA	4595	False	NA	NA	False	AATAAA	-18	NA	128443410	128450913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128443615_128449652
ES.29592.9	chr6	+	816	4	NNC	ENSMUSG00000059659.8	novel	907	5	NA	NA	-7120	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.54896090146283	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACCCATCCTATTT	4617	False	NA	NA	False	NA	NA	NA	128443432	128480187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_128443650_128465853_128465987_128479128_128479327_128479919
ES.29593.1	chr6	-	180	1	Intergenic	novelGene_24538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	128444151	128443971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128444000_128444200
ES.29594.1	chr6	-	1656	2	Intergenic	novelGene_24539	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACAATTTTTTTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	128451835	128449413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128449615_128450380
ES.29595.1	chr6	-	233	1	Intergenic	novelGene_24541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTAGCCCGAAAGG	NA	False	NA	NA	False	NA	NA	NA	128460414	128460181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128460200_128460400
ES.29596.1	chr6	-	175	1	Intergenic	novelGene_24542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128461266	128461091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128461100_128461300
ES.29597.1	chr6	-	195	1	Intergenic	novelGene_24543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGGAAAGTAACATA	9285	False	NA	NA	False	NA	NA	NA	128476902	128476707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128476700_128476900
ES.29598.1	chr6	-	332	1	Intergenic	novelGene_24544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAACCAAATGATAA	9948	False	NA	NA	False	NA	NA	NA	128481610	128481278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128481300_128481600
ES.29599.1	chr6	-	186	1	Intergenic	novelGene_24545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTCATTCATTCAGCA	7988	False	NA	NA	False	NA	NA	NA	128484203	128484017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128484000_128484200
ES.296.1	chr1	+	155	1	Antisense	novelGene_ENSMUSG00000104237.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	7296	False	NA	NA	False	NA	NA	NA	36778638	36778793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36778600_36778800
ES.2960.1	chr10	+	1487	1	Intergenic	novelGene_2303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62995916	62997403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_62995900_62997400
ES.29600.1	chr6	-	137	1	Intergenic	novelGene_24546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAAATTTTTTTA	8109	False	NA	NA	False	NA	NA	NA	128488646	128488509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128488500_128488600
ES.29601.1	chr6	-	158	1	Intergenic	novelGene_24547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6686	False	NA	NA	False	NA	NA	NA	128507153	128506995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128507000_128507200
ES.29602.1	chr6	+	158	1	Intergenic	novelGene_24548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTAGTACTTGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	128575374	128575532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128575400_128575500
ES.29603.1	chr6	-	230	1	Intergenic	novelGene_24549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACTTTACATTGTTTC	1015	False	NA	NA	False	AAAAAG	-30	NA	128599050	128598820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128598800_128599000
ES.29604.1	chr6	+	1683	2	Genic_Genomic	ENSMUSG00000037827.6	novel	1479	1	NA	NA	-73	727	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCACCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	128621802	128624081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_128621928_128622523
ES.29604.2	chr6	+	2279	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-73	-727	-73	727	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCACCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	128621802	128624081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128621800_128624100
ES.29604.3	chr6	+	1647	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-69	-99	-69	99	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCGCTTCTCTTCTCCCA	NA	False	NA	NA	False	ATTAAA	-22	NA	128621806	128623453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128621800_128623500
ES.29604.4	chr6	+	2101	2	Genic_Genomic	ENSMUSG00000037827.6	novel	1479	1	NA	NA	-59	727	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCACCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	128621816	128624081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_128621926_128622089
ES.29604.5	chr6	+	1987	2	Genic_Genomic	ENSMUSG00000037827.6	novel	1479	1	NA	NA	-50	727	multi-exon	FALSE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCACCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	128621825	128624081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_128622013_128622281
ES.29605.1	chr6	+	174	1	Intergenic	novelGene_24550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	128702726	128702900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128702700_128702900
ES.29606.1	chr6	-	156	1	Intergenic	novelGene_24551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAGAATAGAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	128737139	128736983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128737000_128737100
ES.29607.1	chr6	-	203	1	Intergenic	novelGene_24552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGGAAAAACTAAATAA	NA	False	NA	NA	False	NA	NA	NA	128775922	128775719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128775700_128775900
ES.29607.2	chr6	-	93	1	Intergenic	novelGene_24553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGCCTTATACCACA	NA	False	NA	NA	False	NA	NA	NA	128775922	128775829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128775800_128775900
ES.29608.1	chr6	+	88	1	Intergenic	novelGene_24554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCTCCCAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	128815415	128815503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128815400_128815500
ES.29609.1	chr6	+	198	1	Intergenic	novelGene_24555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGCAAACAAGCAAG	NA	False	NA	NA	False	AAAACA	-8	NA	128816011	128816209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128816000_128816200
ES.29609.2	chr6	+	82	1	Intergenic	novelGene_24556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCCACCTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	128816012	128816094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128816000_128816100
ES.2961.1	chr10	-	6328	18	NIC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	185	15	intron_retention	FALSE	canonical	0	0	junction_12	5.75509402759294	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	63039546	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165_63029063_63039496
ES.2961.10	chr10	-	4502	20	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	-5175	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.03532834168714	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	63044906	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63042252_63042408_63044688
ES.2961.11	chr10	-	3242	11	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	-13977	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.7517739905134	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	AATAAA	-10	NA	62972440	62951575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62972242
ES.2961.12	chr10	-	1742	3	ISM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	67595	14457	-13673	-13975	internal_fragment	FALSE	canonical	2	7	junction_2	3.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGCAATTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	62972136	62966030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_62966984_62970711_62970851_62971486
ES.2961.13	chr10	-	179	1	Intergenic	novelGene_2302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	62977505	62977326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_62977300_62977500
ES.2961.2	chr10	-	5259	20	FSM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	2	-15	2	15	multi-exon	FALSE	canonical	1	2	junction_11	6.54919588644307	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	63039729	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165_63029063_63039496
ES.2961.3	chr10	-	4223	19	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	16047	15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	6.93821943216622	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	231	False	NA	NA	False	AATAAA	-27	NA	63023684	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63023590
ES.2961.4	chr10	-	2110	4	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	12	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.1455023315337	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	62958451	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957888
ES.2961.6	chr10	-	4844	18	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	10847	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	7.05342931146993	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	63028884	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983789_62988569_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165
ES.2961.7	chr10	-	2401	5	NNC	ENSMUSG00000020067.9	novel	1833	4	NA	NA	14	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.2958326273579	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	62958449	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62956142_62956213_62957665
ES.2961.8	chr10	-	1837	5	NNC	ENSMUSG00000020067.9	novel	5246	20	NA	NA	14	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.0840220150494	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTGTCTACTCTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	62958449	62951558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62958367
ES.29610.1	chr6	+	84	1	Intergenic	novelGene_24557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCTTTTTTTCTCTCCCAT	NA	False	NA	NA	False	NA	NA	NA	128820250	128820334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128820200_128820300
ES.29611.1	chr6	-	174	1	Intergenic	novelGene_24558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	3198	False	NA	NA	False	NA	NA	NA	128823105	128822931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128822900_128823100
ES.29612.1	chr6	-	353	1	Intergenic	novelGene_24559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGATAACTTATCTATAA	5600	False	NA	NA	False	NA	NA	NA	128834035	128833682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128833700_128834000
ES.29612.2	chr6	-	171	1	Intergenic	novelGene_24560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGCTGGGCGGTGGTGG	5601	False	NA	NA	False	NA	NA	NA	128834034	128833863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128833900_128834000
ES.29613.1	chr6	+	2298	6	FSM	ENSMUSG00000030365.12	ENSMUST00000159866.8	2330	6	0	32	0	-32	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	128864550	128875098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_128864630_128869790_128869874_128870578_128870705_128871631_128871811_128872289_128872397_128873374
ES.29614.1	chr6	+	8079	1	Intergenic	novelGene_24562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTTTTAATGTACATAA	5644	False	NA	NA	False	AATAAA	-16	NA	128998719	129006798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_128998700_129006800
ES.29615.1	chr6	-	3807	4	Intergenic	novelGene_24561	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGACTGTCTTGGCTA	NA	False	NA	NA	False	NA	NA	NA	129017932	128987136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_128988978_128989466_128991166_129015903_129016083_129017844
ES.29616.1	chr6	+	1818	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	-6	8	-6	-8	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAATTGTGGCCTCTT	NA	False	NA	26	True	AATAAA	-30	NA	129510116	129519301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ES.29617.1	chr6	-	178	1	Intergenic	novelGene_24563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	129571631	129571453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_129571500_129571600
ES.29618.1	chr6	-	4396	2	Intergenic	novelGene_24564	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTTTGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	129919492	129912680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_129916049_129918464
ES.29618.2	chr6	-	4503	2	Intergenic	novelGene_24565	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	129919556	129912682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_129916027_129918397
ES.29619.1	chr6	+	5252	2	Intergenic	novelGene_24566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGTGACAATTGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	130609220	130628456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_130610146_130624129
ES.2962.1	chr10	+	3916	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-159	141	-58	-73	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGATGTGTGGGTGCA	NA	False	NA	38	True	ATTAAA	-43	NA	63079530	63153512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.10	chr10	+	3789	24	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	99.1407507980905	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079589	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124921_63125021_63126282_63126456_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.100	chr10	+	2640	8	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	1431	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	122.371465261327	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63140916	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.101	chr10	+	5130	2	FSM	ENSMUSG00000020064.10	ENSMUST00000219002.2	687	2	-1676	-2767	-1676	-2	multi-exon	FALSE	canonical	3	393	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCAGTAGTTTCTA	NA	False	NA	11	True	AATAAA	-25	NA	63145949	63153651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63147694_63150265
ES.2962.102	chr10	+	4953	1	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	1077	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63148702	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63148700_63153700
ES.2962.103	chr10	+	195	1	Intergenic	novelGene_2305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTCTTCCTGAAAATAG	NA	False	NA	NA	False	NA	NA	NA	63152049	63152244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63152000_63152200
ES.2962.11	chr10	+	3849	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	-108	173	5	-101	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079593	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.12	chr10	+	4007	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.623417526113	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCAGTAGTTTCTA	NA	False	NA	11	True	AATAAA	-25	NA	63079596	63153651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081222_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.15	chr10	+	3687	25	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	3	-99	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	74.0416549427866	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGTTTGCATATTT	NA	False	NA	12	True	ATTAAA	-17	NA	63079610	63153486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153181
ES.2962.19	chr10	+	4101	26	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	95.6099241710817	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079619	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63085732_63085866_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.2	chr10	+	4064	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-159	-7	-58	3	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTCTATGGTTGTAA	NA	False	NA	20	True	AATAAA	-34	NA	63079530	63153660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.20	chr10	+	3903	26	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	12	-101	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	92.3267761811274	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079619	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.21	chr10	+	3941	25	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	73.6436615662807	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTCTATGGTTGTAAT	NA	False	NA	21	True	AATAAA	-35	NA	63079623	63153661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152509_63152582_63153058
ES.2962.22	chr10	+	3588	23	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	117.051385551407	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTCTATGGTTGTAA	NA	False	NA	20	True	AATAAA	-34	NA	63079655	63153660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099809_63099965_63105406_63105484_63114113_63114245_63118991_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.23	chr10	+	4240	23	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-13	1	intron_retention	FALSE	canonical	1	1	junction_3	116.816245120133	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079676	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63085732_63085866_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.24	chr10	+	3735	25	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-12	-101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	75.9637957443471	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079677	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123783_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.25	chr10	+	1944	13	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	-5	29731	-5	-1074	5prime_fragment	FALSE	canonical	3	265	junction_7	24.8394846967484	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCGAGATGACTCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	63079684	63123922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676
ES.2962.26	chr10	+	3549	24	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-5	-166	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	76.9757038240382	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAACCATGAATTGTCC	NA	False	NA	-55	True	ATTAAA	-24	NA	63079684	63153419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.27	chr10	+	3751	25	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-4	-95	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	109.996582964603	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTTGCATATTTCGGA	NA	False	NA	16	True	ATTAAA	-21	NA	63079685	63153490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.28	chr10	+	8457	19	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-4	1	intron_retention	FALSE	canonical	2	7	junction_5	119.022977343883	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTAGTTTCTATGGTTGT	NA	False	NA	18	True	AATAAA	-32	NA	63079685	63153658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265
ES.2962.29	chr10	+	4898	24	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	0	1	intron_retention	FALSE	canonical	1	5	junction_10	97.2396528918011	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079689	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099809_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121470_63121795_63121921_63123297_63123358_63123676_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.31	chr10	+	3002	19	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	85.6391366630646	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079693	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.32	chr10	+	3774	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	132.827322490518	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079694	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124921_63125021_63134898_63135019_63139037_63139155_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.33	chr10	+	4585	22	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	5	2	intron_retention	FALSE	canonical	1	5	junction_8	102.533573949454	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079694	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63114113_63114245_63118959_63119121_63121430_63121470_63121795_63121921_63123297_63123358_63123676_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.34	chr10	+	3472	24	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-3	-101	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	125.932153846429	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079698	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63114113_63114245_63118959_63119121_63121430_63121470_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.35	chr10	+	4367	24	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	9	-1	-3	1	intron_retention	FALSE	canonical	3	265	junction_7	39.2621454845877	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079698	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478
ES.2962.37	chr10	+	3604	24	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-2	-101	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_23	71.8255342646385	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079699	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63153070
ES.2962.38	chr10	+	3526	23	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	101.211596124568	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079699	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143572_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.39	chr10	+	3535	24	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-2	-101	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	71.1422069561102	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079699	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.4	chr10	+	4113	26	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	92.3267761811274	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63079581	63153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.40	chr10	+	3509	24	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-2	-101	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	130.769498070876	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079699	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63114113_63114245_63118959_63119121_63121430_63121470_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.41	chr10	+	8293	22	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-2	1	intron_retention	FALSE	canonical	1	2	junction_13	123.801648101156	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079699	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099809_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63125679_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153181
ES.2962.42	chr10	+	3661	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-2	-172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	107.647454219782	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGTACAGAACCATGAA	NA	False	NA	-61	True	ATTAAA	-18	NA	63079699	63153413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105417_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.43	chr10	+	3529	23	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	77.7825029720376	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079699	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.44	chr10	+	3596	24	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	111.24896720066	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCAGTAGTTTCTA	NA	False	NA	11	True	AATAAA	-25	NA	63079699	63153651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.45	chr10	+	4864	25	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	1	-99	intron_retention	FALSE	canonical	3	13	junction_14	94.0874943721121	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGTTTGCATATTT	NA	False	NA	12	True	ATTAAA	-17	NA	63079702	63153486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.46	chr10	+	3641	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	13	244	1	-176	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAAACTGTACAGAACCA	NA	False	NA	-65	True	ATTAAA	-14	NA	63079702	63153409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.47	chr10	+	3488	25	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	1	-169	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	103.85924636524	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACAGAACCATGAATTG	NA	False	NA	-58	True	ATTAAA	-21	NA	63079702	63153416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.48	chr10	+	3888	25	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	95.9461564136655	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079703	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099809_63099974_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.49	chr10	+	4187	24	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	16	172	4	-104	intron_retention	FALSE	canonical	3	265	junction_7	39.2621454845877	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATTTTAAGAGTTTGCA	NA	False	NA	7	True	ATTAAA	-12	NA	63079705	63153481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478
ES.2962.5	chr10	+	3914	24	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	74.9567487134665	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079581	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.50	chr10	+	3897	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	109.016666615706	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079705	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124921_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.51	chr10	+	3344	23	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	9	-102	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	77.7825029720376	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTAAGAGTTTGCATA	NA	False	NA	9	True	ATTAAA	-14	NA	63079710	63153483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.55	chr10	+	3839	25	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	75.4061111397625	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079710	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121470_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.57	chr10	+	3758	24	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	76.9757038240382	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079710	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.58	chr10	+	3734	24	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	76.7348563903993	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079711	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.6	chr10	+	3948	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-3	-100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.1153806630344	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGAGTTTGCATATT	NA	False	NA	11	True	ATTAAA	-16	NA	63079585	63153485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63080861_63080976_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.60	chr10	+	4003	27	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	115.808554527613	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079716	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.61	chr10	+	3691	24	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	71.1422069561102	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079716	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.63	chr10	+	3880	22	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	1	junction_9	80.3507616513944	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCAGTAGTTTCTA	NA	False	NA	11	True	AATAAA	-25	NA	63079717	63153651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.64	chr10	+	5924	23	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-5	-102	intron_retention	FALSE	canonical	3	13	junction_13	109.624000509028	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTAAGAGTTTGCATA	NA	False	NA	9	True	ATTAAA	-14	NA	63079717	63153483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.65	chr10	+	3853	25	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	76.2364628238279	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079718	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099945_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.67	chr10	+	3490	23	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	2	-103	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	79.0716277437716	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTAAGAGTTTGCAT	NA	False	NA	8	True	ATTAAA	-13	NA	63079724	63153482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.68	chr10	+	5010	25	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	3	2	intron_retention	FALSE	canonical	3	13	junction_14	94.0874943721121	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079725	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.69	chr10	+	6594	22	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_15	79.1373844878814	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63079725	63153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63126456_63134898_63135019_63142126_63142226_63143572_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478
ES.2962.7	chr10	+	3923	24	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	77.8422135344282	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079589	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.71	chr10	+	4184	24	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	4	0	intron_retention	FALSE	canonical	3	265	junction_7	41.9705991251766	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079726	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.73	chr10	+	3599	24	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	5	-101	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	74.9567487134665	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	NA	False	NA	10	True	ATTAAA	-15	NA	63079727	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.74	chr10	+	4098	27	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	119.649735359497	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079729	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63125544_63125679_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.75	chr10	+	3889	23	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	7	1	intron_retention	FALSE	canonical	3	18	junction_21	71.9270320108115	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079729	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147694_63150265_63150349_63152478_63152582_63153058
ES.2962.76	chr10	+	3726	25	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	76.2892886030244	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079757	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147350_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.77	chr10	+	3692	26	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	66	-172	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	95.6099241710817	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGTACAGAACCATGAA	NA	False	NA	-61	True	ATTAAA	-18	NA	63079788	63153413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63085732_63085866_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.78	chr10	+	5372	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	160	-1634	127	1630	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGTTTGAAAGGCTAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	63079849	63155287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.79	chr10	+	3408	23	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	136	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	99.657098041648	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079858	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153181
ES.2962.8	chr10	+	4029	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	-112	-3	1	3	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTCTATGGTTGTAA	NA	False	NA	20	True	AATAAA	-34	NA	63079589	63153660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.80	chr10	+	3571	26	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	196	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	105.275455828982	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCAGTAGTTTCTATGG	NA	False	NA	14	True	AATAAA	-28	NA	63079918	63153654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153181
ES.2962.81	chr10	+	3468	23	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	197	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	79.0716277437716	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63079919	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.82	chr10	+	3880	25	NNC	ENSMUSG00000020064.10	novel	732	7	NA	NA	-857	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.0271218966553	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63080743	63153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63080976_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.83	chr10	+	3685	25	NNC	ENSMUSG00000020064.10	novel	732	7	NA	NA	-835	-102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.0271218966553	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTAAGAGTTTGCATA	NA	False	NA	9	True	ATTAAA	-14	NA	63080765	63153483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63080976_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.84	chr10	+	1228	6	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	184	-5519	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	118.271551947203	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGGGTCATACAGAAACTC	NA	False	NA	NA	False	NA	NA	NA	63081784	63119477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63114113_63114245_63118959
ES.2962.85	chr10	+	3314	22	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	193	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	80.8286449303082	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTAGTTTCTATGGTTGT	NA	False	NA	18	True	AATAAA	-32	NA	63081793	63153658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.86	chr10	+	5441	1	Intergenic	novelGene_2304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAACAAAAAGAAATGTTA	NA	False	NA	NA	False	NA	NA	NA	63093750	63099191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63093800_63099200
ES.2962.87	chr10	+	2905	20	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-14271	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	84.4714051176401	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	123	False	NA	13	True	AATAAA	-27	NA	63099910	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63099965_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.88	chr10	+	2983	21	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	25715	169	-8777	-101	3prime_fragment	FALSE	canonical	3	265	junction_3	42.8607046139001	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGAGTTTGCATAT	5221	False	NA	10	True	ATTAAA	-15	NA	63105404	63153484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.89	chr10	+	3021	20	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-4954	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	83.3707469106713	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	9044	False	NA	13	True	AATAAA	-27	NA	63109227	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142180_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.90	chr10	+	4132	19	NIC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-1337	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	107.753390711738	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63112844	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.91	chr10	+	4707	6	NNC	ENSMUSG00000020064.10	novel	3898	25	NA	NA	-4404	6594	intron_retention	FALSE	non_canonical	0	0	junction_5	123.73132182273	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAGAGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	63121878	63131590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63128460_63129464
ES.2962.92	chr10	+	4149	10	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	44420	-2	-2173	2	intron_retention	FALSE	canonical	3	311	junction_1	28.0704580882456	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTAGTTTCTATGGT	NA	False	NA	15	True	AATAAA	-29	NA	63124109	63153655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438
ES.2962.93	chr10	+	11697	7	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	-1308	-1	intron_retention	FALSE	canonical	3	311	junction_1	30.9192496674806	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63124974	63153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_63125021_63126282_63126456_63134898_63142226_63143520_63143689_63144085_63144230_63147245_63147694_63150265
ES.2962.94	chr10	+	2378	1	Antisense	novelGene_ENSMUSG00000096991.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63129187	63131565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_63129200_63131600
ES.2962.95	chr10	+	2988	10	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	53951	0	-5845	0	3prime_fragment	FALSE	canonical	3	311	junction_2	33.7605950447823	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63133640	63153653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.96	chr10	+	7681	9	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	56196	170	-3600	-102	3prime_fragment	FALSE	canonical	3	311	junction_1	31.3106910655131	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTAAGAGTTTGCATA	NA	False	NA	9	True	ATTAAA	-14	NA	63135885	63153483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.97	chr10	+	7149	8	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	57383	-8	-2413	4	intron_retention	FALSE	canonical	3	311	junction_1	31.5206443526804	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTCTATGGTTGTAAT	NA	False	NA	21	True	AATAAA	-35	NA	63137072	63153661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478
ES.2962.98	chr10	+	5214	9	ISM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	58836	-3	-960	-1	3prime_fragment	FALSE	canonical	3	311	junction_1	31.3106910655131	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTAGTTTCTATGGTT	NA	False	NA	16	True	AATAAA	-30	NA	63138525	63153656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.2962.99	chr10	+	3230	10	NNC	ENSMUSG00000020064.10	novel	713	3	NA	NA	524	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.179712490954	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63140009	63153657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63141357_63141857_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ES.29620.1	chr6	-	736	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	30	1	30	-1	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTAGAATAGGTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	131270177	131261351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ES.29620.2	chr6	-	3822	3	NIC	ENSMUSG00000030188.13	novel	767	5	NA	NA	44	0	intron_retention	FALSE	canonical	2	356	junction_1	70.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270163	131261475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131265110_131266351_131266411_131270034
ES.29620.3	chr6	-	647	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	-12	132	-12	3	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCAGGTTACATG	NA	False	NA	NA	False	TATAAA	-12	NA	131270219	131261482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ES.29620.4	chr6	-	599	5	NNC	ENSMUSG00000030188.13	novel	767	5	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.37731722116	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCAGGTTACATG	NA	False	NA	NA	False	TATAAA	-12	NA	131270179	131261482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131261692_131262611_131262689_131264998_131265110_131266353_131266411_131270034
ES.29620.6	chr6	-	569	5	NNC	ENSMUSG00000030188.13	novel	767	5	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	202.807020341999	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCAGGTTACATG	NA	False	NA	NA	False	TATAAA	-12	NA	131270147	131261482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270040
ES.29621.1	chr6	-	3701	1	Intergenic	novelGene_24567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGTTCCCTTACCAAT	NA	False	NA	NA	False	NA	NA	NA	131322537	131318836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_131318800_131322500
ES.29622.1	chr6	+	4761	2	Antisense	novelGene_ENSMUSG00000030189.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGATGTCACCAGTTG	NA	False	NA	NA	False	AAGAAA	-22	NA	131348587	131353538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_131350813_131351002
ES.29623.1	chr6	+	864	1	Intergenic	novelGene_24568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTTTCAGATGTCAAC	NA	False	NA	NA	False	NA	NA	NA	131361964	131362828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_131362000_131362800
ES.29624.1	chr6	-	4437	11	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-396	2255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	879.012224033318	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGGCTGGTTTTGTTA	4537	False	NA	NA	False	NA	NA	NA	131365835	131339562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365658_131365762
ES.29624.10	chr6	-	5710	2	ISM	ENSMUSG00000030189.16	ENSMUST00000203157.2	1035	3	-3908	-242	-3908	-3	intron_retention	FALSE	canonical	3	3275	junction_1	0	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	3694	False	NA	-12	True	AATAAA	-18	NA	131349889	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_131342369_131344727
ES.29624.11	chr6	-	1534	10	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	839	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	925.452655344373	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	5810	False	NA	-12	True	AATAAA	-18	NA	131364562	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364457
ES.29624.12	chr6	-	5417	6	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	3937	-3	intron_retention	FALSE	canonical	0	0	junction_3	1212.22417068791	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	8908	False	NA	-12	True	AATAAA	-18	NA	131361464	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131345524_131352936_131356444_131357838_131357929_131360463
ES.29624.13	chr6	-	5575	3	FSM	ENSMUSG00000030189.16	ENSMUST00000203157.2	1035	3	-4298	-242	-4298	-3	multi-exon	FALSE	canonical	3	3049	junction_2	113	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	3304	False	NA	-12	True	AATAAA	-18	NA	131350279	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351
ES.29624.14	chr6	-	1567	11	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	879.012224033318	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4964	False	NA	-12	True	AATAAA	-18	NA	131365408	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365082_131365371
ES.29624.15	chr6	-	1548	9	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	881.103063991381	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4975	False	NA	-12	True	AATAAA	-18	NA	131365397	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342181_131345362_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.16	chr6	-	1844	9	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	964.315268726986	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4986	False	NA	-12	True	AATAAA	-18	NA	131365386	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357972_131361465_131361530_131364980
ES.29624.17	chr6	-	2525	10	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	925.164009483964	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4955	False	NA	-12	True	AATAAA	-18	NA	131365417	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364321
ES.29624.18	chr6	-	1630	11	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	879.012224033318	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4977	False	NA	-12	True	AATAAA	-18	NA	131365395	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365127_131365340
ES.29624.19	chr6	-	1637	11	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	879.012224033318	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4960	False	NA	-12	True	AATAAA	-18	NA	131365412	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365147_131365370
ES.29624.2	chr6	-	2067	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-206	-8	-168	8	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGTGTATTTCCCTT	4765	False	NA	-1	True	AATAAA	-29	NA	131365607	131341809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.22	chr6	-	1458	10	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	399	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	911.074958632337	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTGTGTAACTAGTG	5370	False	NA	-13	True	AATAAA	-17	NA	131365002	131341821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357830_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.23	chr6	-	1647	11	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	6	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	879.012224033318	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTGTGTAACTAGTG	4977	False	NA	-13	True	AATAAA	-17	NA	131365395	131341821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365141_131365336
ES.29624.25	chr6	-	1477	8	NNC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1023.94668627157	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTGTGTAACTAGTG	4952	False	NA	-13	True	AATAAA	-17	NA	131365420	131341821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131357899_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.26	chr6	-	1727	10	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	919.386752134269	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTGTGTAACTAGTG	4964	False	NA	-13	True	AATAAA	-17	NA	131365408	131341821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353015_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.28	chr6	-	1822	10	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	911.074958632337	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGGCTGTGTAACTAG	4986	False	NA	-15	True	AATAAA	-15	NA	131365386	131341823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356434_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.3	chr6	-	6453	8	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	2150	junction_4	374.083205848591	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4943	False	NA	-9	True	AATAAA	-21	NA	131365429	131341817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.30	chr6	-	4862	4	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	74	-8	intron_retention	FALSE	canonical	3	2150	junction_3	485.901453200361	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	NA	False	NA	-17	True	AATAAA	-13	NA	131355130	131341825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131347378_131352936
ES.29624.31	chr6	-	1406	10	NNC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1081.44448440015	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	4962	False	NA	-17	True	AATAAA	-13	NA	131365410	131341825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980_131365115_131365355
ES.29624.33	chr6	-	3635	9	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	10	-8	intron_retention	FALSE	canonical	3	2076	junction_4	412.357778512786	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	4943	False	NA	-17	True	AATAAA	-13	NA	131365429	131341825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.35	chr6	-	4787	7	NIC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	8	-8	intron_retention	FALSE	canonical	3	624	junction_3	872.991345254287	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	4979	False	NA	-17	True	AATAAA	-13	NA	131365393	131341825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131347378_131356320_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.36	chr6	-	1726	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-40	167	-2	68	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATGCTGGTGCTAAA	4931	False	NA	-6	True	AGTAAA	-24	NA	131365441	131341984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.37	chr6	-	1443	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	26	215	-12	20	multi-exon	FALSE	canonical	3	624	junction_4	774.912807595151	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATCTGAAATATATA	4959	False	NA	-54	True	ATTAAA	-39	NA	131365413	131342032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.38	chr6	-	1358	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	-19	514	-19	-269	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACACCCACGACC	4952	False	NA	-76	True	AAAACA	-5	NA	131365420	131342331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.4	chr6	-	6464	5	NNC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	2087	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1326.54200366969	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	466	False	NA	-9	True	AATAAA	-21	NA	131353117	131341817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131350813_131351002
ES.29624.5	chr6	-	6346	9	NNC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-19	0	intron_retention	FALSE	canonical	1	3	junction_5	960.464470972248	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4952	False	NA	-9	True	AATAAA	-21	NA	131365420	131341817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131357741_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.6	chr6	-	1844	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	-162	2	-162	-2	multi-exon	FALSE	canonical	3	624	junction_4	774.912807595151	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGTGTAACTAGTGTG	4771	False	NA	-11	True	AATAAA	-19	NA	131365601	131341819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.7	chr6	-	3069	8	NIC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	7	-3	intron_retention	FALSE	canonical	3	624	junction_4	817.424851442077	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4940	False	NA	-12	True	AATAAA	-18	NA	131365432	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.8	chr6	-	1286	6	NIC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1077.71072185443	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4965	False	NA	-12	True	AATAAA	-18	NA	131365407	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29624.9	chr6	-	5046	9	NIC	ENSMUSG00000030189.16	novel	1853	10	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	2150	junction_4	354.022046453325	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTGTGTAACTAGTGT	4952	False	NA	-12	True	AATAAA	-18	NA	131365420	131341820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ES.29625.1	chr6	+	145	1	Intergenic	novelGene_24569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7364	False	NA	NA	False	NA	NA	NA	131372672	131372817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_131372700_131372800
ES.29626.1	chr6	-	177	1	Intergenic	novelGene_24570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	131403830	131403653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_131403700_131403800
ES.29627.1	chr6	+	158	1	Intergenic	novelGene_24571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	131460946	131461104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_131460900_131461100
ES.29628.1	chr6	+	136	1	Intergenic	novelGene_24572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132262061	132262197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_132262100_132262200
ES.29629.1	chr6	+	1443	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	352	1047	5	-726	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTCATACCTCATG	NA	False	NA	NA	False	AATAAA	-12	NA	133082223	133083666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_133082200_133083700
ES.29629.2	chr6	+	2445	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	391	6	10	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTGTGTCTCCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	133082262	133084707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_133082300_133084700
ES.29629.3	chr6	+	1775	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	397	670	16	-349	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGAGGCTTCGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	133082268	133084043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_133082300_133084000
ES.29629.4	chr6	+	1054	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	1466	322	883	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATTGTCTCTGTTATT	NA	False	NA	NA	False	AATATA	-19	NA	133083337	133084391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_133083300_133084400
ES.2963.1	chr10	+	2535	1	Antisense	novelGene_ENSMUSG00000020063.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAAGTGTTTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	63157865	63160400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_63157900_63160400
ES.29630.1	chr6	-	745	1	Antisense	novelGene_ENSMUSG00000072704.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133082624	133081879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_133081900_133082600
ES.29631.1	chr6	+	182	1	Intergenic	novelGene_24573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	133955557	133955739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_133955600_133955700
ES.29632.1	chr6	-	1000	2	Intergenic	novelGene_24574	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCCCAGTCTCAGGACA	NA	False	NA	NA	False	NA	NA	NA	133989149	133987668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_133988055_133988535
ES.29633.1	chr6	+	6341	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	-634	0	-634	0	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134012028	134247121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.10	chr6	+	2974	5	ISM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	183	34379	-86	-12505	5prime_fragment	FALSE	canonical	3	28	junction_2	21.3819433167334	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTTTAGCATGTGG	NA	False	NA	NA	False	NA	NA	NA	134012845	134212742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481
ES.29633.11	chr6	+	5312	8	NIC	ENSMUSG00000030199.17	novel	5707	9	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.1258106459138	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134012922	134247121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.13	chr6	+	4932	9	NNC	ENSMUSG00000030199.17	novel	5707	9	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	27.0274744473101	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAAGTC	NA	False	NA	NA	False	AATAAA	-9	NA	134012931	134247108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210576_134225688_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.14	chr6	+	4084	1	NIC	ENSMUSG00000030199.17	novel	5545	8	NA	NA	18	-208214	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAAAGAATAGGAAT	NA	False	NA	NA	False	NA	NA	NA	134012949	134017033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134012900_134017000
ES.29633.15	chr6	+	1948	4	ISM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	331	45746	62	-23872	5prime_fragment	FALSE	canonical	3	28	junction_2	22.647050335284	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	134012993	134201375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827
ES.29633.16	chr6	+	2637	1	Intergenic	novelGene_24575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGGTTATTAGACATTA	NA	False	NA	NA	False	AGTAAA	-14	NA	134165552	134168189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134165600_134168200
ES.29633.17	chr6	+	4805	5	NNC	ENSMUSG00000030199.17	novel	5545	8	NA	NA	-2796	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	29.92490601489	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134221731	134247121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134221861_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.2	chr6	+	2780	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	-443	3370	-443	-3367	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGTTGTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	134012219	134243751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.3	chr6	+	5919	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	-367	-7	-367	4	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAAGTCTCTGTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	134012295	134247125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.4	chr6	+	2066	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	109	3370	109	-3370	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTTTTTTGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	134012771	134243748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.6	chr6	+	5433	8	NIC	ENSMUSG00000030199.17	novel	5707	9	NA	NA	128	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.492485058537	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAAGTC	NA	False	NA	NA	False	AATAAA	-9	NA	134012790	134247108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134013102_134043269_134043429_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.8	chr6	+	5634	10	NNC	ENSMUSG00000030199.17	novel	5707	9	NA	NA	-117	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.3632638765109	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAAGTC	NA	False	NA	NA	False	AATAAA	-9	NA	134012814	134247108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134013102_134043269_134043429_134114247_134114381_134179897_134179990_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ES.29633.9	chr6	+	1021	3	ISM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	158	46684	-111	-24813	5prime_fragment	FALSE	canonical	3	29	junction_1	26.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTATTCACTCTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	134012820	134200434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134013102_134114247_134114381_134199827
ES.29634.1	chr6	-	680	1	Intergenic	novelGene_24576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTCCTCTTTCTATC	NA	False	NA	NA	False	NA	NA	NA	134220091	134219411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134219400_134220100
ES.29635.1	chr6	-	177	1	Intergenic	novelGene_24577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	134274231	134274054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134274100_134274200
ES.29636.1	chr6	+	3756	1	Intergenic	novelGene_24579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCTGAGCAAGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	134310058	134313814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134310100_134313800
ES.29636.2	chr6	+	147	1	Intergenic	novelGene_24578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134310058	134310205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134310100_134310200
ES.29637.1	chr6	-	3237	9	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53550	-1029	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.992156741649222	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTGTAAAAATCAATTC	NA	False	NA	NA	False	AAAAAG	-6	NA	134326828	134286942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134289018_134289104_134289201_134291473_134291617_134293152_134293294_134293656_134293872_134296145_134296280_134296421_134296584_134300778_134300927_134326705
ES.29637.10	chr6	-	4320	1	Intergenic	novelGene_24581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326826	134322506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134322500_134326800
ES.29637.2	chr6	-	4894	3	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53550	-1035	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	3.5	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAGTATGTGTAAAAAT	NA	False	NA	NA	False	AAGAAA	-3	NA	134326828	134286948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134291617_134293190_134293294_134326705
ES.29637.3	chr6	-	1485	6	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53571	-1057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10.8	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	134326807	134286970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134287767_134291473_134291617_134296145_134296280_134296421_134296584_134300778_134300927_134326705
ES.29637.4	chr6	-	1125	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53590	-1057	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	4.54606056566195	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	134326788	134286970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134287767_134291473_134291617_134293190_134293294_134326705
ES.29637.5	chr6	-	2427	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53539	-1057	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.0485374896143	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	134326839	134286970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134289018_134291473_134291617_134293190_134293294_134326705
ES.29637.6	chr6	-	2510	5	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53552	-1057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4266319178434	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	134326826	134286970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134289018_134289104_134289201_134291473_134291617_134293190_134293294_134326705
ES.29637.7	chr6	-	1162	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53514	-1061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.9652400197707	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTAATAAAAACATGAAAA	NA	False	NA	NA	False	NA	NA	NA	134326864	134286974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134287767_134291473_134291617_134293190_134293294_134326740
ES.29637.8	chr6	-	1014	2	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53525	-6514	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGGGCTGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	134326853	134292427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134293294_134326705
ES.29637.9	chr6	-	607	2	Intergenic	novelGene_24580	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134326826	134316036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134316523_134326705
ES.29638.1	chr6	+	169	1	Intergenic	novelGene_24582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAGATAGATAA	NA	False	NA	NA	False	NA	NA	NA	134362571	134362740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134362600_134362700
ES.29639.1	chr6	+	1742	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	-130	-34	-130	34	multi-exon	FALSE	canonical	3	57	junction_3	10	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGGATGCCCTGATT	NA	False	NA	39	True	NA	NA	NA	134391260	134415112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ES.29639.2	chr6	+	2307	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	-108	-621	-108	0	multi-exon	FALSE	canonical	3	57	junction_3	10	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTTGCCTGTAACC	NA	False	NA	13	True	AATAAA	-25	NA	134391282	134415699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ES.29639.3	chr6	+	1550	6	NNC	ENSMUSG00000030200.14	novel	1578	6	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.6393041458444	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTACTTTTTAGTCTCTA	NA	False	NA	-2	True	GATAAA	-9	NA	134391401	134415071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134391599_134400573_134401026_134404258_134404424_134407032_134407100_134409114_134409376_134414663
ES.29639.4	chr6	+	2409	7	NNC	ENSMUSG00000030200.14	novel	1578	6	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.221886971436	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAAAAAGAGTTGCCT	NA	False	NA	7	True	AATAAA	-19	NA	134391436	134415693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134391599_134397515_134397778_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ES.2964.1	chr10	-	5579	10	NIC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	-1	1543	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	95.9085212295782	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATAGCTTGGATCAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	63174815	63153240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.14	chr10	-	5453	9	FSM	ENSMUSG00000020063.17	ENSMUST00000146028.8	3458	9	-2003	8	37	-8	multi-exon	FALSE	canonical	2	5	junction_6	101.689171006553	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174774	63154793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523_63167677_63171414_63171657_63172758
ES.2964.15	chr10	-	5561	8	NIC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	2	-8	intron_retention	FALSE	canonical	3	191	junction_7	31.5225866544571	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174809	63154793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_63156744_63157527_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.16	chr10	-	4199	10	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	-134	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	100.43682370304	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174948	63154793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160057_63160223_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.17	chr10	-	4026	10	NIC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	-1	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	95.9085212295782	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174815	63154793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.18	chr10	-	3880	9	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	73.7892903814639	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGTTAACTTCCATTGT	NA	False	NA	-8	True	ATTAAA	-18	NA	63174809	63154793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157542_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.19	chr10	-	3708	9	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	47	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.2252215377045	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCGTTAACTTCCATTG	NA	False	NA	-9	True	ATTAAA	-17	NA	63174764	63154794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171516_63172758_63172876_63174343
ES.2964.2	chr10	-	4125	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-15	-205	-12	203	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGGTCTGTGGTTCCC	NA	False	NA	NA	False	AATACA	-19	NA	63174826	63154580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.20	chr10	-	4077	10	NNC	ENSMUSG00000020063.17	novel	4430	14	NA	NA	-516	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	78.5083152000828	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCGTTAACTTCCATTG	NA	False	NA	-9	True	ATTAAA	-17	NA	63175330	63154794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343_63174830_63175167
ES.2964.21	chr10	-	3449	9	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	1	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	83.0357603686508	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACTTTTTTCCCGTTA	NA	False	NA	-19	True	ATTAAA	-7	NA	63174813	63154804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172838_63174744
ES.2964.22	chr10	-	2139	1	NIC	ENSMUSG00000020063.17	novel	4430	14	NA	NA	4448	18	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAAATTGTCATTTGA	NA	False	NA	16	True	AATACA	-40	NA	63156957	63154818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_63154800_63157000
ES.2964.23	chr10	-	3952	9	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.7305049171072	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTTTTAAAGTCTTA	NA	False	NA	-3	True	AATACA	-21	NA	63174813	63154837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157430_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.24	chr10	-	3283	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	26	596	26	-545	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTAGTTCTTAGTTAT	NA	False	NA	NA	False	AATACA	-16	NA	63174785	63155381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.25	chr10	-	3198	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-2	709	1	-658	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAATTGTAGCTCAACCA	NA	False	NA	NA	False	ATTAAA	-16	NA	63174813	63155494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.26	chr10	-	2626	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	1	1113	1	-1113	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGGCAGCTAACT	NA	False	NA	NA	False	TTTAAA	-15	NA	63174813	63155949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
ES.2964.27	chr10	-	2676	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	2	1227	2	-1176	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTTCTGCTGAACT	NA	False	NA	NA	False	TTTAAA	-7	NA	63174809	63156012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.28	chr10	-	2082	8	NNC	ENSMUSG00000020063.17	novel	3740	8	NA	NA	-512	-1176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	88.7436114400838	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTTCTGCTGAACT	NA	False	NA	NA	False	TTTAAA	-7	NA	63175326	63156012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171567_63175247
ES.2964.29	chr10	-	204	1	ISM	ENSMUSG00000020063.17	ENSMUST00000148516.2	842	3	204	3072	204	-3072	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTGTTTTAGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	63161201	63160997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_63161000_63161200
ES.2964.3	chr10	-	6550	7	NIC	ENSMUSG00000020063.17	novel	3353	8	NA	NA	2	195	intron_retention	FALSE	canonical	3	191	junction_6	17.3565549577098	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTTAATGTGGTCTG	NA	False	NA	NA	False	AATACA	-11	NA	63174809	63154588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.30	chr10	-	4123	4	NNC	ENSMUSG00000020063.17	novel	4430	14	NA	NA	0	-762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.0382634710871	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTCCAACCAATTGT	NA	False	NA	NA	False	NA	NA	NA	63174814	63167930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63169336_63169537_63171657_63172747_63172876_63174343
ES.2964.31	chr10	-	5016	2	Genic_Genomic	ENSMUSG00000020063.17	novel	4430	14	NA	NA	-377	-762	multi-exon	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTCCAACCAATTGT	NA	False	NA	NA	False	NA	NA	NA	63173148	63167930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_63169336_63169537
ES.2964.32	chr10	-	4314	3	ISM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	-3	13145	0	-762	5prime_fragment	FALSE	canonical	3	191	junction_2	12	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTCCAACCAATTGT	NA	False	NA	NA	False	NA	NA	NA	63174814	63167930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_63171657_63172758_63172876_63174343
ES.2964.33	chr10	-	6561	2	Genic_Genomic	ENSMUSG00000020063.17	novel	4430	14	NA	NA	2	-762	multi-exon	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTCCAACCAATTGT	NA	False	NA	NA	False	NA	NA	NA	63174809	63167930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_63169336_63169653
ES.2964.5	chr10	-	3353	8	FSM	ENSMUSG00000020063.17	ENSMUST00000177694.8	3353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.4997112047123	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCATTGTTCATAGCA	NA	False	NA	0	True	ATTAAA	-26	NA	63174811	63154785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ES.2964.6	chr10	-	3801	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	-12	-49	-12	-2	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCCATTGTTCATAG	NA	False	NA	-2	True	ATTAAA	-24	NA	63174826	63154787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
ES.2964.9	chr10	-	3637	10	NNC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	78.5083152000828	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTTAACTTCCATTGTT	NA	False	NA	-7	True	ATTAAA	-19	NA	63174814	63154792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343_63174485_63174748
ES.29640.1	chr6	+	2821	2	Intergenic	novelGene_24583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGACGAAGAG	5225	False	NA	NA	False	NA	NA	NA	134419726	134422762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134419750_134419964
ES.29641.1	chr6	+	735	1	Intergenic	novelGene_24584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134493671	134494406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134493700_134494400
ES.29642.1	chr6	+	6270	1	Intergenic	novelGene_24585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCATTTCTCAAAAGCCA	NA	False	NA	NA	False	AAAAAG	-11	NA	134504339	134510609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134504300_134510600
ES.29643.10	chr6	-	5859	24	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.0176076642986	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGACTGTGCTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	134543939	134423444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134423961_134427526_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.12	chr6	-	11884	22	NIC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	65	junction_11	11.5895409882126	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGACTGTGCTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	134543929	134423444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.14	chr6	-	9311	23	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	11	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.4948111555892	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGAAAATGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	134543917	134423450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445767_134447686_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.17	chr6	-	5094	4	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.7493961317424	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGAAAATGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	134543931	134423450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428044_134430512_134430585_134518905_134519009_134543605
ES.29643.2	chr6	-	9601	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-233	0	-181	0	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134544109	134423438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.20	chr6	-	6188	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-73	3253	-21	754	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCTGTTTAAACAGAAAT	NA	False	NA	NA	False	AGTAAA	-27	NA	134543949	134426691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.21	chr6	-	4454	8	ISM	ENSMUSG00000030201.16	ENSMUST00000111950.4	2756	11	4732	-749	1200	749	3prime_fragment	FALSE	canonical	3	81	junction_7	9.48683298050514	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAGTCTGTTTAAACA	NA	False	NA	NA	False	AGTAAA	-22	NA	134443524	134426696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357
ES.29643.22	chr6	-	6046	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-59	3381	-7	626	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCACAAATCTAACTG	NA	False	NA	NA	False	ATTAAA	-30	NA	134543935	134426819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.23	chr6	-	5900	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-73	3541	-21	466	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTGATTTCAGTATAC	NA	False	NA	NA	False	ATTAAA	-22	NA	134543949	134426979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.24	chr6	-	5480	22	NIC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	5	466	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	21.8155533357955	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTGATTTCAGTATAC	NA	False	NA	NA	False	ATTAAA	-22	NA	134543923	134426979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134543605
ES.29643.26	chr6	-	5544	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-79	3903	-27	104	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAGTAGCCAAATTGC	NA	False	NA	NA	False	AATAAA	-34	NA	134543955	134427341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.27	chr6	-	5378	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-73	4063	-21	-56	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTGCAAACTAAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	134543949	134427501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.29	chr6	-	4541	13	NNC	ENSMUSG00000030201.16	novel	722	4	NA	NA	-8	-15186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6410032760697	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACAACTGTAGAGCTTC	NA	False	NA	NA	False	TTTAAA	-7	NA	134543936	134454546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134456021_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.30	chr6	-	1777	2	ISM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	-248	94312	-196	-14	5prime_fragment	FALSE	canonical	3	105	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATAAAAACAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	134544124	134517750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134519009_134543605
ES.29643.31	chr6	-	177	1	Intergenic	novelGene_24586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCACTGCTTT	NA	False	NA	NA	False	NA	NA	NA	134524883	134524706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134524700_134524900
ES.29643.4	chr6	-	6356	11	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	401	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	27.8416953506786	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134447855	134423438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428038_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651
ES.29643.5	chr6	-	9343	23	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.2709182938848	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134543948	134423438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447758_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.6	chr6	-	8786	21	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	22.9553370700585	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134543949	134423438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134463555_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.7	chr6	-	9915	22	NIC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	-26	0	intron_retention	FALSE	canonical	3	65	junction_12	12.3505120295594	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134543902	134423438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29643.9	chr6	-	9396	23	NNC	ENSMUSG00000030201.16	novel	9368	23	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.3020215516275	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGACTGTGCTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	134543927	134423444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134428044_134430512_134430611_134431676_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ES.29644.1	chr6	+	176	1	Intergenic	novelGene_24587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	134571184	134571360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134571200_134571400
ES.29645.1	chr6	-	6251	4	FSM	ENSMUSG00000032718.5_ENSMUSG00000107728.2	ENSMUST00000047443.5	2376	4	100	-3975	100	2	multi-exon	TRUE	canonical	3	7	junction_1	3.09120616516523	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCTCTCATCTTTAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	134609351	134582194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
ES.29645.2	chr6	-	2355	5	NNC	ENSMUSG00000032718.5	novel	2376	4	NA	NA	92	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.59016994374947	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGCTGGATAGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	134609359	134586172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134587815_134594279_134594421_134598695_134599013_134599349_134599424_134609178
ES.29645.3	chr6	-	2164	3	NNC	ENSMUSG00000032718.5	novel	2376	4	NA	NA	12836	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	3.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGCTGGATAGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	134596615	134586172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134587815_134594279_134594421_134596234
ES.29645.4	chr6	-	2317	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	56	3	56	-3	multi-exon	FALSE	canonical	3	7	junction_1	3.09120616516523	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGCTGGATAGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	134609395	134586172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
ES.29646.1	chr6	-	186	1	Intergenic	novelGene_24588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	134617723	134617537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134617500_134617700
ES.29647.1	chr6	+	1774	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	-5	-5	-5	5	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGATTCTAATCTCAT	NA	False	NA	36	True	ATTAAA	-37	NA	134617897	134688155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
ES.29647.2	chr6	+	1372	3	FSM	ENSMUSG00000042992.16	ENSMUST00000203234.2	485	3	-198	-689	96	689	multi-exon	FALSE	canonical	3	52	junction_1	7	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAACTCAAAGATGGT	NA	False	NA	NA	False	NA	NA	NA	134618019	134663953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134618221_134621291_134621436_134662926
ES.29647.3	chr6	+	1468	3	NIC	ENSMUSG00000042992.16	novel	1764	4	NA	NA	97	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATTGTGTAGCAGCT	NA	False	NA	11	True	ATTAAA	-12	NA	134618020	134688130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134618221_134621291_134621436_134687006
ES.29647.4	chr6	+	3044	1	NIC	ENSMUSG00000042992.16	novel	1764	4	NA	NA	-96	-512	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGACAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	134618121	134621165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134618100_134621200
ES.29647.5	chr6	+	176	1	Intergenic	novelGene_24589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGATCAAGTCAT	6503	False	NA	NA	False	NA	NA	NA	134647611	134647787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134647600_134647800
ES.29648.1	chr6	-	1702	1	Antisense	novelGene_ENSMUSG00000108166.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTAGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	134668122	134666420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_134666400_134668100
ES.29649.1	chr6	-	175	1	Intergenic	novelGene_24590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	134675207	134675032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134675000_134675200
ES.2965.1	chr10	+	199	1	Intergenic	novelGene_2306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGATCCCATCTGCAT	7984	False	NA	NA	False	NA	NA	NA	63190788	63190987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63190800_63191000
ES.29650.1	chr6	+	175	1	Intergenic	novelGene_24592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134736618	134736793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134736600_134736800
ES.29651.1	chr6	+	223	1	Intergenic	novelGene_24593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	134752834	134753057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134752800_134753100
ES.29651.2	chr6	+	340	1	Intergenic	novelGene_24594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134752835	134753175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134752800_134753200
ES.29652.1	chr6	+	2852	1	Intergenic	novelGene_24596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGGGCAACACCTGTAA	NA	False	NA	NA	False	NA	NA	NA	134761637	134764489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134761600_134764500
ES.29652.2	chr6	+	2156	1	Intergenic	novelGene_24595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAGAATCAAC	NA	False	NA	NA	False	NA	NA	NA	134761637	134763793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134761600_134763800
ES.29653.1	chr6	-	5511	9	NNC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-15409	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	35.2683905927106	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGTGGCTTCTCCTTG	7723	False	NA	5	True	AATAAA	-32	NA	134784997	134692427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134783784_134783870_134783951_134784025_134784407
ES.29653.10	chr6	-	3723	6	ISM	ENSMUSG00000030203.18	ENSMUST00000129433.4	3993	7	31096	16	-279	-11	3prime_fragment	FALSE	canonical	0	0	junction_1	33.3970058538187	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTGTACGTAAGTGT	NA	False	NA	-14	True	AATAAA	-13	NA	134738342	134692446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134695049_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808
ES.29653.11	chr6	-	4431	5	NIC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-66	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.994959267597	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTGTACGTAAGTGT	NA	False	NA	-14	True	AATAAA	-13	NA	134769654	134692446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134769239
ES.29653.12	chr6	-	4938	9	NNC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-14683	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.7797079362032	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTGTACGTAAGTGT	8449	False	NA	-14	True	AATAAA	-13	NA	134784271	134692446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134783784_134783870_134783951_134784025_134784235
ES.29653.13	chr6	-	3213	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-11	1902	-11	440	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGATACGGACATC	NA	False	NA	NA	False	AATAAA	-17	NA	134769599	134694337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ES.29653.14	chr6	-	2922	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-95	2277	-95	65	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACAGTTGTTCTCTCA	NA	False	NA	NA	False	TATAAA	-14	NA	134769683	134694712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ES.29653.15	chr6	-	6436	5	ISM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-91	5419	-91	-313	5prime_fragment	FALSE	canonical	3	50	junction_4	17.0055138117024	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATAAGAGCCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	134769679	134697854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ES.29653.16	chr6	-	3528	4	ISM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	29	22023	29	0	5prime_fragment	FALSE	canonical	3	50	junction_3	19.6015872373189	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	134769559	134714458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134716939_134735581_134735721_134737808_134738398_134769239
ES.29653.17	chr6	-	213	1	Intergenic	novelGene_24591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGTGAGTGATTCTTGA	NA	False	NA	NA	False	NA	NA	NA	134726030	134725817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134725800_134726000
ES.29653.2	chr6	-	5238	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	-132	-2	-132	2	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGAGACGTGGCTTC	NA	False	NA	-1	True	AATAAA	-26	NA	134769720	134692433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ES.29653.3	chr6	-	5218	8	NNC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.7599707802465	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769598	134692435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134738641_134738746_134769239
ES.29653.6	chr6	-	5222	8	NNC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	35.1138091331136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAAGTGTGAGACGTGG	NA	False	NA	-5	True	AATAAA	-22	NA	134769587	134692437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134768033_134768155_134769239
ES.29653.8	chr6	-	4663	6	NIC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	-150	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.8818281969823	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAAGTGTGAGACGTGG	NA	False	NA	-5	True	AATAAA	-22	NA	134769738	134692437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134769239
ES.29653.9	chr6	-	4662	1	NIC	ENSMUSG00000030203.18	novel	3993	7	NA	NA	5920	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACGTAAGTGTGAGACGT	NA	False	NA	-7	True	AATAAA	-20	NA	134697101	134692439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134692400_134697100
ES.29654.1	chr6	+	176	1	Intergenic	novelGene_24597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTTTGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	134788511	134788687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134788500_134788700
ES.29655.1	chr6	+	3629	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.06155281280883	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCAGTTGCCTGTTTGAC	NA	False	NA	8	True	AATAAA	-19	NA	134807116	134835894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
ES.29655.2	chr6	+	3479	4	FSM	ENSMUSG00000032652.14	ENSMUST00000111937.2	612	4	-99	-2768	2	-3	multi-exon	FALSE	canonical	0	0	junction_2	9.41629792788369	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTCAGTTGCCTGTTT	NA	False	NA	5	True	AATAAA	-16	NA	134807118	134835891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134807408_134826065_134826264_134829240_134829278_134832936
ES.29655.3	chr6	+	4447	5	NNC	ENSMUSG00000032652.14	novel	3629	5	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.33666600026653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTTCAGTTGCCTGTTT	NA	False	NA	5	True	AATAAA	-16	NA	134807131	134835891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134807408_134826065_134826656_134827598_134828188_134829240_134829278_134832936
ES.29655.4	chr6	+	4712	1	NIC	ENSMUSG00000032652.14	novel	3629	5	NA	NA	3055	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACGTTCAGTTGCCT	141	False	NA	1	True	AATAAA	-12	NA	134831175	134835887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134831200_134835900
ES.29655.5	chr6	+	426	1	ISM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	25873	2479	4869	292	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTAATGTTTGCTTG	1955	False	NA	NA	False	NA	NA	NA	134832989	134833415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134833000_134833400
ES.29656.1	chr6	+	173	1	Intergenic	novelGene_24598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	GGGGCT	-25	NA	134849019	134849192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134849000_134849200
ES.29657.1	chr6	+	11159	2	Antisense	novelGene_ENSMUSG00000032641.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCTAA	NA	False	NA	NA	False	NA	NA	NA	134851010	134863090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_134852494_134853414
ES.29657.2	chr6	+	2611	2	Antisense	novelGene_ENSMUSG00000032641.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGCTAGGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	134851010	134854542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_134852494_134853414
ES.29657.3	chr6	+	12080	1	Antisense	novelGene_ENSMUSG00000032641.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCTAA	NA	False	NA	NA	False	NA	NA	NA	134851010	134863090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_134851000_134863100
ES.29657.4	chr6	+	1642	1	Intergenic	novelGene_24599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAAATCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	134851010	134852652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134851000_134852700
ES.29658.1	chr6	-	1740	3	NNC	ENSMUSG00000032641.19	novel	1647	3	NA	NA	-28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	178	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTGGATTTTGTTCT	NA	False	NA	0	True	ACTAAA	-37	NA	134864823	134846052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134854179_134854296_134864592
ES.29658.10	chr6	-	1647	4	NNC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.8747549010185	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATTGATTATGGTTCC	NA	False	NA	-15	True	ACTAAA	-22	NA	134874854	134846067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134864592_134864749_134874124_134874177_134874793
ES.29658.14	chr6	-	1687	5	NIC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	1	14	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	26.7348087705897	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGTTTTCACTAAACTT	NA	False	NA	-4	True	ATTAAA	-31	NA	134874887	134846105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847446_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29658.15	chr6	-	1801	7	NNC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.5381209306001	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATTTACTTAGTTTTC	NA	False	NA	-13	True	ATTAAA	-22	NA	134874859	134846114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134861118_134861191_134862354_134862434_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29658.16	chr6	-	3496	2	ISM	ENSMUSG00000032641.19	ENSMUST00000111932.8	1711	5	8028	-8	-2003	3	3prime_fragment	FALSE	canonical	3	94	junction_1	0	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGATTTACTTAGTTT	NA	False	NA	-15	True	ATTAAA	-20	NA	134866798	134846116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134847407_134864592
ES.29658.17	chr6	-	1579	4	NIC	ENSMUSG00000032641.19	novel	1643	4	NA	NA	189	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	41.0636362518253	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGATTTACTTAGTTT	NA	False	NA	-15	True	ATTAAA	-20	NA	134875352	134846116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134875271
ES.29658.18	chr6	-	3913	2	NNC	ENSMUSG00000032641.19	novel	1484	3	NA	NA	988	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTGATTTACTTAGT	NA	False	NA	-17	True	ATTAAA	-18	NA	134863743	134846118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847407_134861118
ES.29658.19	chr6	-	5219	2	ISM	ENSMUSG00000032641.19	ENSMUST00000203762.4	498	4	6620	-1092	6620	0	3prime_fragment	FALSE	canonical	2	12	junction_1	0	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134858111	134846119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_134847407_134854179
ES.29658.2	chr6	-	1921	8	NNC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.6582516567037	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTCCTGTGGATTTTG	NA	False	NA	-4	True	ACTAAA	-33	NA	134874842	134846056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847407_134854179_134854298_134861118_134861191_134862354_134862434_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29658.21	chr6	-	1752	6	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	28.667751917442	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874851	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847446_134854179_134854298_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29658.23	chr6	-	1630	5	NNC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0263066836631	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874864	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847407_134861122_134861191_134864592_134864749_134874124_134874177_134874794
ES.29658.24	chr6	-	1624	5	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.3664085533089	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874880	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29658.25	chr6	-	1752	6	NNC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.6852910875055	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874829	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134854179_134854298_134861122_134861191_134864592_134864749_134874124_134874177_134874794
ES.29658.26	chr6	-	1826	5	NNC	ENSMUSG00000032641.19	novel	498	4	NA	NA	-142	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5837282736057	178	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134864937	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847407_134861118_134861191_134862354_134862434_134863853_134863900_134864592
ES.29658.27	chr6	-	1855	7	NNC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6104099158952	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874874	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134854179_134854298_134862354_134862434_134863853_134863900_134864592_134864749_134874124_134874177_134874793
ES.29658.29	chr6	-	2070	4	NNC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.8747549010185	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGAATTGATTTACT	NA	False	NA	-21	True	ATTAAA	-14	NA	134874816	134846122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134864592_134864749_134874124_134874177_134874277
ES.29658.3	chr6	-	3730	1	NIC	ENSMUSG00000032641.19	novel	1643	4	NA	NA	14943	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGTTCCTGTGGATTT	NA	False	NA	-6	True	ACTAAA	-31	NA	134849788	134846058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134846100_134849800
ES.29658.31	chr6	-	1624	5	NNC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0263066836631	181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGAGAATTGATTTAC	NA	False	NA	-22	True	ATTAAA	-13	NA	134874816	134846123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134847446_134861118_134861191_134864592_134864749_134874124_134874177_134874794
ES.29658.34	chr6	-	177	1	Intergenic	novelGene_24600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCTAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	134853395	134853218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134853200_134853400
ES.29658.35	chr6	-	989	2	NNC	ENSMUSG00000032641.19	novel	610	2	NA	NA	-4	-104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTGTGATATGTAC	NA	False	NA	NA	False	NA	NA	NA	134874854	134873764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134874177_134874277
ES.29658.5	chr6	-	1742	5	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.5968748546647	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGTTCCTGTGGATTT	NA	False	NA	-6	True	ACTAAA	-31	NA	134874862	134846058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134854179_134854298_134864592_134864749_134874124_134874177_134874794
ES.29658.6	chr6	-	1653	4	NIC	ENSMUSG00000032641.19	novel	1711	5	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	8.64098759787715	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGTTCCTGTGGATTT	NA	False	NA	-6	True	ACTAAA	-31	NA	134874891	134846058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134864592_134864749_134874124_134874177_134874794
ES.29658.7	chr6	-	1930	4	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	34.4512538072113	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTTCCTGTGGATT	NA	False	NA	-7	True	ACTAAA	-30	NA	134874865	134846059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134864592_134864749_134873820_134874177_134874794
ES.29658.9	chr6	-	1753	6	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	28.4422221354099	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTGATTATGGTTCCTG	NA	False	NA	-13	True	ACTAAA	-24	NA	134874834	134846065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_134847407_134854179_134854298_134863853_134863900_134864592_134864749_134874124_134874177_134874794
ES.29659.1	chr6	-	215	1	Intergenic	novelGene_24601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAACAAAAACAAGAGAG	4514	False	NA	NA	False	NA	NA	NA	134883310	134883095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_134883100_134883300
ES.2966.1	chr10	+	174	1	Intergenic	novelGene_2307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	63212315	63212489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63212300_63212500
ES.29660.1	chr6	+	593	1	ISM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	4519	1	4407	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGAGTGCAACTGTC	3793	False	NA	12	True	AATAAA	-17	NA	134901882	134902475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134901900_134902500
ES.29661.1	chr6	+	564	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	-125	5223	-125	0	multi-exon	FALSE	canonical	3	145	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTGTTTCTGGGCTCTG	7840	False	NA	24	True	NA	NA	NA	134905929	134928538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134906224_134928268
ES.29661.2	chr6	+	379	2	NIC	ENSMUSG00000098318.8	novel	474	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTGTTTCTGGGCTCTG	7966	False	NA	24	True	NA	NA	NA	134906055	134928538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134906165_134928268
ES.29661.3	chr6	+	1287	1	Intergenic	novelGene_24602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	134910945	134912232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_134910900_134912200
ES.29661.4	chr6	+	2773	1	NIC	ENSMUSG00000098318.8	novel	243	3	NA	NA	12583	-6833	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTAAAAAGTGGCTACAGA	NA	False	NA	NA	False	NA	NA	NA	134918700	134921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134918700_134921500
ES.29661.5	chr6	+	4060	2	NNC	ENSMUSG00000098318.8	novel	5662	2	NA	NA	21720	2146	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTGGAATTCG	2532	False	NA	NA	False	NA	NA	NA	134927837	134935907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134931847_134935856
ES.29661.6	chr6	+	1905	1	ISM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	24940	862	24877	-862	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAACGCACAC	1853	False	NA	NA	False	NA	NA	NA	134930994	134932899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134931000_134932900
ES.29661.7	chr6	+	235	1	ISM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	25666	1806	25603	-1806	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAACACAGTAAAAA	2579	False	NA	NA	False	NA	NA	NA	134931720	134931955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_134931700_134932000
ES.29662.1	chr6	-	4640	3	NNC	ENSMUSG00000107730.2	novel	353	2	NA	NA	-82	12458	intron_retention	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAACGTGCTGGGGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	134907157	134893496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_134895868_134895931_134898026_134906982
ES.29663.1	chr6	-	1337	2	Antisense	novelGene_ENSMUSG00000098318.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAACGGGCAGGGAAGTTC	1257	False	NA	NA	False	NA	NA	NA	134927197	134925816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_134926995_134927038
ES.29664.1	chr6	+	3359	2	FSM	ENSMUSG00000090698.3	ENSMUST00000167323.3	3567	2	211	-3	211	3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGGTGTTCTTGTGTT	NA	False	NA	NA	False	AATAAA	-35	NA	134958891	134963802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134958993_134960544
ES.29665.1	chr6	+	1762	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	2	0	2	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6576	False	NA	20	True	ATTAAA	-20	NA	134988576	135000739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.10	chr6	+	1668	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	162.551684088477	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6593	False	NA	15	True	ATTAAA	-15	NA	134988593	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.11	chr6	+	1956	13	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	202.376093779214	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6593	False	NA	15	True	ATTAAA	-15	NA	134988593	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134993073_134993210_134993258_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.12	chr6	+	5361	8	NNC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_6	190.126059148521	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6593	False	NA	15	True	ATTAAA	-15	NA	134988593	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134993617_134994083_134994201_134995075_134998542_135000241
ES.29665.14	chr6	+	2553	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	485	junction_5	31.5988923856517	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6593	False	NA	15	True	ATTAAA	-15	NA	134988593	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.15	chr6	+	2381	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	514	junction_10	25.2792404949199	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6593	False	NA	15	True	ATTAAA	-15	NA	134988593	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.16	chr6	+	4119	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	2387	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	159.165437088698	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGATGTGTATGTGTG	6593	False	NA	NA	False	AAAACA	-30	NA	134988593	135003126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998529_135000241
ES.29665.17	chr6	+	4025	10	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	485	junction_5	24.8660609597564	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6593	False	NA	20	True	ATTAAA	-20	NA	134988593	135000739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134997650_134998411_134998542_135000241
ES.29665.18	chr6	+	5598	8	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	485	junction_5	27.4374985472549	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTGTGTGCA	6593	False	NA	18	True	ATTAAA	-18	NA	134988593	135000737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134998542_135000241
ES.29665.19	chr6	+	3243	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	485	junction_5	24.8356598462775	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6594	False	NA	15	True	ATTAAA	-15	NA	134988594	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134997650_134998411_134998542_135000241
ES.29665.2	chr6	+	2518	11	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	3	-1	intron_retention	FALSE	canonical	3	485	junction_5	31.3687742827162	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6577	False	NA	15	True	ATTAAA	-15	NA	134988577	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134998542_135000241
ES.29665.20	chr6	+	3277	10	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	485	junction_5	32.5841739969226	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6594	False	NA	15	True	ATTAAA	-15	NA	134988594	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134996075_134997578_134998542_135000241
ES.29665.21	chr6	+	1679	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	158.67191578696	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTGTGTGCA	6595	False	NA	18	True	ATTAAA	-18	NA	134988595	135000737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995075_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.22	chr6	+	2339	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	158.02923675517	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6598	False	NA	15	True	ATTAAA	-15	NA	134988598	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995332_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.23	chr6	+	4177	4	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	796	-2	intron_retention	FALSE	canonical	3	514	junction_3	15.7480157480236	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTGTGTGCA	NA	False	NA	18	True	ATTAAA	-18	NA	134993580	135000737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134993617_134994083_134994201_134995013_134998542_135000241
ES.29665.24	chr6	+	3528	3	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	-1215	-2	intron_retention	FALSE	canonical	3	514	junction_2	7.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTGTGTGCA	NA	False	NA	18	True	ATTAAA	-18	NA	134994747	135000737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134997650_134998411_134998542_135000241
ES.29665.3	chr6	+	4662	9	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	514	junction_8	19.3483687942937	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6578	False	NA	15	True	ATTAAA	-15	NA	134988578	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134993617_134994083_134994201_134995013_134995161_134995936_134998542_135000241
ES.29665.4	chr6	+	6892	5	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	514	junction_4	17.2246190088489	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6578	False	NA	15	True	ATTAAA	-15	NA	134988578	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134998542_135000241
ES.29665.5	chr6	+	7312	6	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	520	junction_4	14.2912560679599	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6579	False	NA	16	True	ATTAAA	-16	NA	134988579	135000735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134993617_134994083_134994201_134995013
ES.29665.6	chr6	+	4017	10	FSM	ENSMUSG00000030204.11	ENSMUST00000155277.8	4006	10	-12	1	-2	-1	multi-exon	FALSE	canonical	3	485	junction_5	26.0389072612125	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6582	False	NA	15	True	ATTAAA	-15	NA	134988582	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134998542_135000241
ES.29665.7	chr6	+	1789	12	NNC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	210.563038989348	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCTGTGTGTGTCTGTG	6584	False	NA	12	True	ATTAAA	-12	NA	134988584	135000731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_134988695_134989264_134989359_134992157_134992347_134992538_134992611_134992744_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ES.29665.8	chr6	+	5015	7	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	0	-4	intron_retention	FALSE	canonical	3	514	junction_6	17.2014211299209	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCTGTGTGTGTCTGTG	6588	False	NA	12	True	ATTAAA	-12	NA	134988588	135000731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134993617_134994083_134994201_134995013_134995161_134995936_134998542_135000241
ES.29665.9	chr6	+	3147	10	NIC	ENSMUSG00000030204.11	novel	1764	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	514	junction_9	25.760051376377	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	6589	False	NA	15	True	ATTAAA	-15	NA	134988589	135000734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134998542_135000241
ES.29666.1	chr6	+	2363	7	NNC	ENSMUSG00000046733.8	novel	2083	4	NA	NA	-12432	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.0226213212208	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTATTTATTTATTT	NA	False	NA	28	True	AATAAA	-28	NA	135030216	135061703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135030332_135033400_135033562_135033743_135033779_135039395_135039494_135055543_135056483_135060440_135060497_135060744
ES.29666.2	chr6	+	2379	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	-299	3	-299	-3	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTATTTATTTATTTA	NA	False	NA	29	True	AATAAA	-29	NA	135042349	135061704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
ES.29666.3	chr6	+	2516	5	NNC	ENSMUSG00000046733.8	novel	2083	4	NA	NA	-279	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.8127109446905	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTAAATGTTATTTAT	NA	False	NA	22	True	AATAAA	-22	NA	135042369	135061697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135042774_135043619_135043784_135055543_135056483_135060440_135060497_135060744
ES.29666.4	chr6	+	3616	3	NNC	ENSMUSG00000046733.8	novel	2083	4	NA	NA	15129	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	32	True	AATAAA	-32	NA	135057777	135061707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135058798_135058863_135060497_135060744
ES.29667.1	chr6	-	159	1	Intergenic	novelGene_24603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATCAATCAATCAATA	NA	False	NA	NA	False	NA	NA	NA	135031525	135031366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_135031400_135031500
ES.29668.1	chr6	-	3541	3	Antisense	novelGene_ENSMUSG00000046733.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACAGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	135056228	135049338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_135052346_135052429_135052541_135055805
ES.29668.2	chr6	-	3611	4	Antisense	novelGene_ENSMUSG00000046733.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACAGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	135061289	135049338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_135052346_135052429_135052541_135059329_135059619_135061085
ES.29668.3	chr6	-	3099	3	Antisense	novelGene_ENSMUSG00000046733.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTGTGGGCCCACAT	NA	False	NA	NA	False	NA	NA	NA	135056243	135049795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_135052346_135052429_135052541_135055805
ES.29668.4	chr6	-	2195	3	Antisense	novelGene_ENSMUSG00000046733.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGCTTGCCATGTAAG	NA	False	NA	NA	False	AATAAA	-21	NA	135057526	135050493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_135052346_135052429_135052541_135057294
ES.29669.1	chr6	-	171	1	Intergenic	novelGene_24604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAATCTTTC	NA	False	NA	NA	False	NA	NA	NA	135077898	135077727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_135077700_135077900
ES.2967.1	chr10	+	157	1	Intergenic	novelGene_2308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	63213232	63213389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63213200_63213400
ES.29670.1	chr6	-	1079	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	-4	-17	-4	17	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCAGTTCTATAGTCC	NA	False	NA	-12	True	AATACA	-37	NA	135145217	135114502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ES.29670.2	chr6	-	1412	6	NNC	ENSMUSG00000042770.9	novel	1058	4	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.959414321749	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTGGAGACAGTTTT	NA	False	NA	-37	True	AATACA	-12	NA	135145214	135114527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_135115062_135129818_135130000_135132148_135132288_135140986_135141211_135141736_135141874_135145017
ES.29671.1	chr6	+	4199	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	53	1	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_2	20.9165006633519	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCCTTTTCTCATT	NA	False	NA	NA	False	AATAAA	-21	NA	135175027	135213241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.11	chr6	+	3741	2	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	7738	1083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTTTTTTTTTACAA	NA	False	NA	NA	False	NA	NA	NA	135183147	135187390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135186430_135186931
ES.29671.12	chr6	+	3599	10	ISM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	18907	1	-14717	-1	3prime_fragment	FALSE	canonical	3	64	junction_3	10.5619863451699	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTGTCCTTTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	135193881	135213239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.2	chr6	+	4161	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	59	1	59	-1	multi-exon	FALSE	canonical	3	64	junction_6	10.7558123821495	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTGTCCTTTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	135175033	135213239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.3	chr6	+	5696	12	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-66	-2	intron_retention	FALSE	canonical	3	11	junction_2	19.9880129366834	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACACGTGTGTCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	135175040	135213234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135210475_135210976
ES.29671.4	chr6	+	3137	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	67	1017	-65	-1013	multi-exon	FALSE	canonical	3	64	junction_6	10.7558123821495	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATTCTAGGTTTAAGGG	NA	False	NA	NA	False	AATAAA	-12	NA	135175041	135212223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.6	chr6	+	4051	12	NIC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	23.6583813534329	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACGTGTGTCCTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	135175041	135213236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_135175100_135186030_135186430_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.7	chr6	+	2214	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-62	-1963	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	20.9165006633519	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAGCCAGTGACCTACA	NA	False	NA	NA	False	TATAAA	-9	NA	135175044	135211273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29671.8	chr6	+	4255	14	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-61	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.2113295683016	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATACACGTGTGTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	135175045	135213233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135207200_135207313_135208618_135208737_135210253_135210475_135210976
ES.29671.9	chr6	+	4083	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5954032717298	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGTGTCCTTTTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	135175052	135213239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_135175130_135186119_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ES.29672.1	chr6	-	176	1	Intergenic	novelGene_24605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGAGAGAGCGGGATC	NA	False	NA	NA	False	NA	NA	NA	135206420	135206244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_135206200_135206400
ES.29673.1	chr6	+	2698	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	22	1	22	-1	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTGTTTTCT	NA	False	NA	6	True	TATAAA	-19	NA	135339950	135360170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ES.29674.1	chr6	-	156	1	Intergenic	novelGene_24606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	135855648	135855492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_135855500_135855600
ES.29675.1	chr6	+	2774	1	Intergenic	novelGene_24607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTATTTGAGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	136282956	136285730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136283000_136285700
ES.29676.1	chr6	+	1718	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	1	-146	1	146	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	136304537	136307127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136304647_136305518
ES.29676.2	chr6	+	1602	2	FSM	ENSMUSG00000094973.3	ENSMUST00000204530.2	1573	2	1	-30	1	30	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAAAATTTTAAATTAT	NA	False	NA	NA	False	AGTAAA	-16	NA	136304537	136307011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136304647_136305518
ES.29677.1	chr6	+	206	1	Intergenic	novelGene_24608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAACTCCACACACTGG	NA	False	NA	NA	False	NA	NA	NA	136343647	136343853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136343600_136343900
ES.29678.1	chr6	-	1510	2	Antisense	novelGene_ENSMUSG00000083916.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATCTACGTAGCTGAGGC	NA	False	NA	NA	False	AATAAA	-29	NA	136368695	136360619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_136362049_136368614
ES.29679.1	chr6	-	161	1	Intergenic	novelGene_24609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATATGTATATAT	NA	False	NA	NA	False	NA	NA	NA	136370768	136370607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_136370600_136370800
ES.2968.1	chr10	-	156	1	Intergenic	novelGene_2309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	63214144	63213988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63214000_63214100
ES.29680.1	chr6	+	171	1	Intergenic	novelGene_24610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAATACATGT	5575	False	NA	NA	False	NA	NA	NA	136403998	136404169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136404000_136404200
ES.29681.1	chr6	+	2669	1	Intergenic	novelGene_24611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	136451383	136454052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136451400_136454100
ES.29681.2	chr6	+	2214	1	Intergenic	novelGene_24612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTAAAAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	136451386	136453600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136451400_136453600
ES.29682.1	chr6	+	2538	1	Intergenic	novelGene_24613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	136454494	136457032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136454500_136457000
ES.29683.1	chr6	-	4141	1	FSM	ENSMUSG00000091408.4	ENSMUST00000178117.2	1065	1	69	-3145	69	3145	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATTTCTAAATTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	136464115	136459974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136460000_136464100
ES.29683.2	chr6	-	1583	1	FSM	ENSMUSG00000091408.4	ENSMUST00000178117.2	1065	1	114	-632	114	632	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCACATGTGACACTGTT	NA	False	NA	NA	False	NA	NA	NA	136464070	136462487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136462500_136464100
ES.29684.1	chr6	+	7994	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_15	48.9936957395768	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATTCCAAGAGTTCTC	7047	False	NA	31	True	AATAAA	-31	NA	136495798	136587858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.10	chr6	+	7955	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-17	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	7070	False	NA	14	True	AATAAA	-14	NA	136495821	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584368_136584430
ES.29684.13	chr6	+	7948	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-14	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	7073	False	NA	14	True	AATAAA	-14	NA	136495824	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584392_136584458
ES.29684.14	chr6	+	6957	17	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-14	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	71.1239015732405	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAGTACCCTGACTCA	7073	False	NA	17	True	AATAAA	-17	NA	136495824	136587844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136536986_136537978_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.15	chr6	+	3668	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-14	-1239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.2666062150086	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAAACTTCGGGGTTT	7073	False	NA	22	True	AATAAA	-30	NA	136495824	136584078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495926_136537309_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.17	chr6	+	6958	17	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-13	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	83.690277213067	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTACCCTGACTCAT	7074	False	NA	18	True	AATAAA	-18	NA	136495825	136587845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136536986_136537978_136538438_136540759_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584370_136584434
ES.29684.19	chr6	+	5624	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-12	193	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	72.7557252424547	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGGTGGTGTTCTGTCAT	7075	False	NA	NA	False	TATAAA	-22	NA	136495826	136585510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584380_136584446
ES.29684.20	chr6	+	4382	16	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-12	-1230	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	75.1982269294518	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGGGTTTTGAAATGTA	7075	False	NA	31	True	AATAAA	-39	NA	136495826	136584087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136495962_136532415_136532539_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.21	chr6	+	7942	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-8	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	7079	False	NA	16	True	AATAAA	-16	NA	136495830	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584382_136584450
ES.29684.23	chr6	+	6263	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-2	-19	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_1	70.7950837103186	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	7085	False	NA	14	True	AATAAA	-14	NA	136495836	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.24	chr6	+	3316	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-1	-1169	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	54.9332524271249	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTATGGGTGTTTGT	7086	False	NA	92	True	NA	NA	NA	136495837	136584148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136536986_136537978_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.26	chr6	+	7938	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTCATTCCAAGAGTT	7091	False	NA	28	True	AATAAA	-28	NA	136495842	136587855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584394_136584466
ES.29684.28	chr6	+	4230	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.3304908361387	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCGGGGTTTTGAAAT	7092	False	NA	28	True	AATAAA	-36	NA	136495843	136584084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543773_136548468_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.3	chr6	+	4421	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	0	3638	0	-1095	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGATCTCCTGTTTTCCT	7048	False	NA	NA	False	TTTAAA	-24	NA	136495799	136584222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.30	chr6	+	5594	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	57.4034455024745	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCACGGGGTGGTGTT	7092	False	NA	NA	False	TATAAA	-15	NA	136495843	136585503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584364_136584427
ES.29684.32	chr6	+	7846	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	76.6332706026913	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	7092	False	NA	16	True	AATAAA	-16	NA	136495843	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584384_136584446
ES.29684.34	chr6	+	6148	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	740	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_15	48.9936957395768	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAATAGTGGCTCTAGA	7092	False	NA	NA	False	NA	NA	NA	136495843	136586057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.36	chr6	+	2561	14	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1235	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	59.5778045323878	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTTCGGGGTTTTGAA	7092	False	NA	26	True	AATAAA	-34	NA	136495843	136584082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136495962_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.37	chr6	+	4044	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	57.4034455024745	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCCCTGAACAATTCAA	7092	False	NA	10	True	AATAAA	-18	NA	136495843	136584066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564357_136564533_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.4	chr6	+	7982	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	2	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACCCTGACTCATTCC	7050	False	NA	21	True	AATAAA	-21	NA	136495801	136587848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584380_136584442
ES.29684.40	chr6	+	3276	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1212	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	70.9478681850272	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTATTCCTTGCTTTT	7092	False	NA	49	True	CATAAA	-44	NA	136495843	136584105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136536986_136537978_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.41	chr6	+	4176	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	57.4034455024745	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAAACTTCGGGGTTT	7092	False	NA	22	True	AATAAA	-30	NA	136495843	136584078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136536825_136536881_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.42	chr6	+	4273	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	44	3742	0	-1199	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTGGTTTTGAGTTT	7092	False	NA	62	True	NA	NA	NA	136495843	136584118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.43	chr6	+	7934	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-18	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGAGTACCCTGACT	7092	False	NA	15	True	AATAAA	-15	NA	136495843	136587842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584404_136584466
ES.29684.44	chr6	+	6230	17	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	740	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	83.251665711564	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAATAGTGGCTCTAGA	7092	False	NA	NA	False	NA	NA	NA	136495843	136586057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576468_136576555_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.45	chr6	+	7755	17	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	72.8150214155706	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTACCCTGACTCATT	7093	False	NA	19	True	AATAAA	-19	NA	136495844	136587846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564357_136564533_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.46	chr6	+	7924	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	8	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGAGTACCCTGA	7100	False	NA	13	True	AATAAA	-13	NA	136495851	136587840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584388_136584450
ES.29684.47	chr6	+	7929	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	11	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	72.7557252424547	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	7103	False	NA	14	True	AATAAA	-14	NA	136495854	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584378_136584442
ES.29684.49	chr6	+	4179	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	26	-1254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.3304908361387	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCTTCCCTGAACAATT	7118	False	NA	7	True	AATAAA	-15	NA	136495869	136584063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543766_136548465_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.5	chr6	+	4352	15	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	2	-1171	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	55.9380123394619	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATATGTATGGGTGTTT	7050	False	NA	90	True	NA	NA	NA	136495801	136584146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.50	chr6	+	4526	15	NIC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	-214	-1169	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	51.1530815797254	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTATGGGTGTTTGT	8636	False	NA	92	True	NA	NA	NA	136509710	136584148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.51	chr6	+	8161	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	-213	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	81.5251835665247	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	8637	False	NA	16	True	AATAAA	-16	NA	136509711	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.52	chr6	+	6112	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	-30	666	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	69.8555334641112	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATGGAATTCATATTAT	8820	False	NA	NA	False	AATATA	-16	NA	136509894	136585983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584358_136584422
ES.29684.54	chr6	+	8054	17	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	7	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.1513358673838	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	8857	False	NA	14	True	AATAAA	-14	NA	136509931	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136532415_136532539_136536759_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584374_136584442
ES.29684.55	chr6	+	7931	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	7	-16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	81.8821917961002	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAGTACCCTGACTCA	8857	False	NA	17	True	AATAAA	-17	NA	136509931	136587844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576655_136576804_136580282_136580466_136582379_136582493_136583471_136584377_136584438
ES.29684.58	chr6	+	7923	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	23	-18	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	81.5251835665247	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGAGTACCCTGACT	8873	False	NA	15	True	AATAAA	-15	NA	136509947	136587842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584394_136584462
ES.29684.59	chr6	+	7917	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	24	-16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	69.8555334641112	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAGTACCCTGACTCA	8874	False	NA	17	True	AATAAA	-17	NA	136509948	136587844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584388_136584454
ES.29684.6	chr6	+	7977	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	2	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	57.4034455024745	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	7050	False	NA	16	True	AATAAA	-16	NA	136495801	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584420_136584482
ES.29684.60	chr6	+	7916	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	26	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	69.8555334641112	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	8876	False	NA	14	True	AATAAA	-14	NA	136509950	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584400_136584462
ES.29684.61	chr6	+	8024	17	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	35	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.1513358673838	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	8885	False	NA	14	True	AATAAA	-14	NA	136509959	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136532415_136532539_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584390_136584458
ES.29684.62	chr6	+	7907	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	35	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	69.8555334641112	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTACCCTGACTCAT	8885	False	NA	18	True	AATAAA	-18	NA	136509959	136587845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584412_136584478
ES.29684.64	chr6	+	7910	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	39	-11	at_least_one_novel_splicesite	FALSE	non_canonical	3	35	junction_1	63.5111188865558	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACCCTGACTCATTCCA	8889	False	NA	22	True	AATAAA	-22	NA	136509963	136587849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.66	chr6	+	7900	16	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	39	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	69.8555334641112	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGAGTACCCTGA	8889	False	NA	13	True	AATAAA	-13	NA	136509963	136587840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584378_136584442
ES.29684.67	chr6	+	7658	17	NNC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	108	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	76.3961458042878	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	8958	False	NA	16	True	AATAAA	-16	NA	136510032	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564357_136564533_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.68	chr6	+	4111	16	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	8633	-1253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	75.0367613610526	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTCCCTGAACAATTC	NA	False	NA	8	True	AATAAA	-16	NA	136518557	136584064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136518745_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564357_136564533_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.69	chr6	+	7920	16	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	-26	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	74.3957585409873	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	NA	False	NA	14	True	AATAAA	-14	NA	136530975	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136531083_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584358_136584422
ES.29684.7	chr6	+	7987	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	3	15	junction_3	66.7814345458377	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTACCCTGACTCATT	7051	False	NA	19	True	AATAAA	-19	NA	136495802	136587846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.70	chr6	+	4207	15	NIC	ENSMUSG00000030213.13	novel	1034	5	NA	NA	-21	-1258	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	74.4444732121649	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGCCTTCCCTGAAC	NA	False	NA	3	True	AATAAA	-11	NA	136530980	136584059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136531083_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.71	chr6	+	4208	15	NIC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	-16	-1243	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	58.0912810908445	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATTCAAACTTCGGG	NA	False	NA	18	True	AATAAA	-26	NA	136530985	136584074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_136531083_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.72	chr6	+	4341	16	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	-15	-1230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1982269294518	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGGGTTTTGAAATGTA	NA	False	NA	31	True	AATAAA	-39	NA	136530986	136584087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136531083_136532415_136532539_136536763_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.74	chr6	+	7916	16	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	-12	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	74.3957585409873	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCTGACTCATTCCAAG	NA	False	NA	24	True	AATAAA	-24	NA	136530989	136587851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136531083_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584398_136584462
ES.29684.75	chr6	+	8137	18	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	-12	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.3377444438424	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACCCTGACTCATTCC	NA	False	NA	21	True	AATAAA	-21	NA	136530989	136587848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136531083_136531403_136531504_136532415_136532539_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.76	chr6	+	7667	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-936	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	59.2666062150086	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTACCCTGACTCAT	3872	False	NA	18	True	AATAAA	-18	NA	136536904	136587845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584430
ES.29684.77	chr6	+	2937	15	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-249	-1211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.2666062150086	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATTCCTTGCTTTTT	4559	False	NA	50	True	CATAAA	-45	NA	136537591	136584106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564183_136564558_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.78	chr6	+	5533	10	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-2969	-826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.673815319607	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGTAGGTACCACAAAGA	437	False	NA	NA	False	NA	NA	NA	136551607	136587034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584382_136584450
ES.29684.79	chr6	+	5545	8	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-8543	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	80.2117096647799	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	8974	False	NA	14	True	AATAAA	-14	NA	136564040	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.8	chr6	+	4190	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	7	-1210	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	57.1778511896579	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTATTCCTTGCTTTTTG	7059	False	NA	51	True	NA	NA	NA	136495810	136584107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136495962_136536761_136537874_136537978_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.83	chr6	+	5929	8	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	-8083	825	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	80.2117096647799	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGACTGACTCATCAAGA	9434	False	NA	NA	False	NA	NA	NA	136564500	136588685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584426
ES.29684.85	chr6	+	4838	6	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	846	-18	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	94.4105926260396	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTGAGTACCCTGACT	NA	False	NA	15	True	AATAAA	-15	NA	136573429	136587842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584400_136584466
ES.29684.86	chr6	+	6301	5	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	2523	-17	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_4	85.2243363130509	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAGTACCCTGACTC	NA	False	NA	16	True	AATAAA	-16	NA	136575106	136587843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.87	chr6	+	5536	6	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	3193	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.890509489756	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGAGTACCCTGAC	NA	False	NA	14	True	AATAAA	-14	NA	136575776	136587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136576555_136576647_136576804_136580282_136580466_136582379_136582493_136583471_136584359_136584422
ES.29684.88	chr6	+	174	1	Intergenic	novelGene_24615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAAAAGAAATCTT	NA	False	NA	NA	False	NA	NA	NA	136576093	136576267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136576100_136576300
ES.29684.89	chr6	+	1617	4	ISM	ENSMUSG00000030213.13	ENSMUST00000185332.2	3226	5	3512	1233	3512	-1233	3prime_fragment	FALSE	canonical	3	218	junction_1	15.5848929700813	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCGGGGTTTTGAAAT	NA	False	NA	28	True	AATAAA	-36	NA	136576095	136584084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_136576804_136580282_136580466_136582379_136582493_136583471
ES.29684.91	chr6	+	7850	4	NNC	ENSMUSG00000030213.13	novel	3226	5	NA	NA	4455	-15	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_3	95.7229799415422	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTACCCTGACTCAT	704	False	NA	18	True	AATAAA	-18	NA	136577038	136587845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_136580466_136582379_136582493_136583471_136584359_136584422
ES.29685.1	chr6	-	323	1	Intergenic	novelGene_24614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAATATCTCTTTGT	9478	False	NA	NA	False	NA	NA	NA	136509589	136509266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_136509300_136509600
ES.29686.3	chr6	-	2274	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	-266	2	-266	-2	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTCCTGCGTTTA	NA	False	NA	-2	True	AATAAA	-15	NA	136639192	136589069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
ES.29686.4	chr6	-	3307	1	Intergenic	novelGene_24616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTTACAATTCCC	NA	False	NA	NA	False	AATAAA	-40	NA	136607272	136603965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_136604000_136607300
ES.29686.5	chr6	-	1389	1	Genic_Genomic	ENSMUSG00000030214.8	novel	NA	NA	NA	NA	-260	-46924	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTTTTCTCGTTACCG	NA	False	NA	NA	False	NA	NA	NA	136639186	136637797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_136637800_136639200
ES.29687.1	chr6	+	1873	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	-49	7	-49	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTCTTGACAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	136785192	136787065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136785200_136787100
ES.29687.2	chr6	+	600	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	-47	1278	-47	-997	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAGAGAGCTGTGTAGT	NA	False	NA	22	True	AATAAA	-18	NA	136785194	136785794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136785200_136785800
ES.29687.3	chr6	+	904	2	FSM	ENSMUSG00000060032.7	ENSMUST00000203982.2	577	2	-53	-274	36	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTCTTGACAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	136785277	136787065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_136785713_136786596
ES.29688.1	chr6	+	163	1	Intergenic	novelGene_24617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGAAGTTTAGGG	NA	False	NA	NA	False	NA	NA	NA	136791712	136791875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136791700_136791900
ES.29689.1	chr6	-	2645	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	685.628062436187	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTTTGTGTAATGT	2913	False	NA	0	True	AATAAA	-20	NA	136805150	136790650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801426_136802979_136803103_136805017
ES.29689.10	chr6	-	2611	11	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	530.462100436968	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2927	False	NA	-2	True	AATAAA	-18	NA	136805136	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802998_136803108_136805017
ES.29689.12	chr6	-	2583	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	513.23102268338	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2918	False	NA	-2	True	AATAAA	-18	NA	136805145	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798306_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.15	chr6	-	2670	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	500.56957640916	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2912	False	NA	-2	True	AATAAA	-18	NA	136805151	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803120_136805017
ES.29689.16	chr6	-	2656	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	531.287125761579	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2914	False	NA	-2	True	AATAAA	-18	NA	136805149	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801427_136802971_136803108_136805017
ES.29689.17	chr6	-	2645	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	500.56957640916	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2919	False	NA	-2	True	AATAAA	-18	NA	136805144	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803102_136805017
ES.29689.2	chr6	-	2749	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	-9	-1	-9	1	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTTTGTGTAATGT	2823	False	NA	0	True	AATAAA	-20	NA	136805240	136790650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.20	chr6	-	2668	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	513.494236168735	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2912	False	NA	-2	True	AATAAA	-18	NA	136805151	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798385_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.21	chr6	-	2231	9	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	1744	-1	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_4	530.405917670608	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	6714	False	NA	-2	True	AATAAA	-18	NA	136801349	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797584_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327
ES.29689.24	chr6	-	5133	11	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	1089	junction_10	215.689220871141	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2912	False	NA	-2	True	AATAAA	-18	NA	136805151	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.26	chr6	-	7572	7	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1089	junction_6	239.541518090057	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTGTGTTTGTGTAA	2925	False	NA	-3	True	AATAAA	-17	NA	136805138	136790653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.27	chr6	-	3788	11	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1089	junction_10	214.531792515702	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTGTGTTTGTGTAA	2912	False	NA	-3	True	AATAAA	-17	NA	136805151	136790653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.30	chr6	-	3130	11	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	1089	junction_10	207.575624773238	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTCTGTGTTTGTGTAA	2917	False	NA	-3	True	AATAAA	-17	NA	136805146	136790653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.33	chr6	-	2799	11	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1089	junction_10	216.506004535671	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTGTGTTTGTGTA	2921	False	NA	-4	True	AATAAA	-16	NA	136805142	136790654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.34	chr6	-	6494	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-8	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	536.196605733382	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTGTGTTTGTGTA	2914	False	NA	-4	True	AATAAA	-16	NA	136805149	136790654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136792054_136792097_136793232_136793941_136794236_136794927_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.36	chr6	-	4374	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	2	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	500.56957640916	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCTTCTGTGTTTGTGT	2924	False	NA	-5	True	AATAAA	-15	NA	136805139	136790655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803271_136803449
ES.29689.37	chr6	-	8643	9	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-5	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	737.491313508166	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCTTCTGTGTTTGTGT	2917	False	NA	-5	True	AATAAA	-15	NA	136805146	136790655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791878_136792129_136793232_136793941_136794236_136794927_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803271_136803449
ES.29689.38	chr6	-	10929	7	NNC	ENSMUSG00000030216.13	novel	2339	7	NA	NA	-7	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	886.393566964221	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCTTCTGTGTTTGTGT	2915	False	NA	-5	True	AATAAA	-15	NA	136805148	136790655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791878_136792129_136793691_136793900_136798661_136799791_136799989_136801327_136802546_136802998_136803271_136803449
ES.29689.39	chr6	-	3746	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	247	junction_10	451.455689963035	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCTTCTGTGTTTGTGT	2911	False	NA	-5	True	AATAAA	-15	NA	136805152	136790655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136802546_136802998_136803108_136805019
ES.29689.44	chr6	-	2640	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	685.628062436187	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCTTCTGTGTTTGTG	2920	False	NA	-6	True	AATAAA	-14	NA	136805143	136790656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802964_136803102_136805019
ES.29689.45	chr6	-	3281	10	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	1089	junction_9	216.726886218292	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2914	False	NA	-7	True	AATAAA	-13	NA	136805149	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.48	chr6	-	3107	12	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	500.56957640916	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2912	False	NA	-7	True	AATAAA	-13	NA	136805151	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136804563
ES.29689.50	chr6	-	2582	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	42	-6	at_least_one_novel_splicesite	FALSE	canonical	2	79	junction_6	492.783928309355	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2874	False	NA	-7	True	AATAAA	-13	NA	136805189	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798266_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.52	chr6	-	3804	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-8	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	667.409931398182	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2914	False	NA	-7	True	AATAAA	-13	NA	136805149	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791882_136792133_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803104_136805017
ES.29689.53	chr6	-	2645	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	678.636169092099	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2918	False	NA	-7	True	AATAAA	-13	NA	136805145	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798520_136798661_136799791_136799989_136801327_136801427_136802979_136803108_136805017
ES.29689.57	chr6	-	2664	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	639.349739970229	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2904	False	NA	-7	True	AATAAA	-13	NA	136805159	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801425_136802964_136803108_136805019
ES.29689.59	chr6	-	6847	8	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	247	junction_7	514.246665184191	1313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2913	False	NA	-7	True	AATAAA	-13	NA	136805150	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136798661_136799791_136799989_136801327_136802546_136802998_136803108_136805019
ES.29689.60	chr6	-	5609	10	NIC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	1089	junction_9	215.57422599555	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2909	False	NA	-7	True	AATAAA	-13	NA	136805154	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.69	chr6	-	6859	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-6	intron_retention	FALSE	canonical	0	0	junction_10	521.368439781312	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATACCTTCTGTGTTTGT	2912	False	NA	-7	True	AATAAA	-13	NA	136805151	136790657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803271_136803449
ES.29689.72	chr6	-	2454	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	80	205	-10	-205	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTGTTTGAGTTATT	2912	False	NA	NA	False	AAAAAG	-15	NA	136805151	136790856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ES.29689.9	chr6	-	3814	11	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	-10	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	684.135432498566	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTTTGTGTAAT	2912	False	NA	-2	True	AATAAA	-18	NA	136805151	136790652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_136791877_136792129_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801427_136802971_136803108_136805017
ES.2969.1	chr10	-	183	1	Intergenic	novelGene_2310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTAAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	63221855	63221672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63221700_63221900
ES.29690.1	chr6	-	189	1	Intergenic	novelGene_24618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGAGAGGCTGGAA	NA	False	NA	NA	False	NA	NA	NA	136862052	136861863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_136861900_136862100
ES.29691.1	chr6	-	1098	6	FSM	ENSMUSG00000030220.14	ENSMUST00000111891.4	828	6	22	-292	-9	-54	multi-exon	FALSE	canonical	0	0	junction_5	5.57135531087365	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCATTTGCTTTCCT	5450	False	NA	NA	False	AATAAA	-20	NA	136918875	136900706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918810
ES.29692.1	chr6	+	190	1	Intergenic	novelGene_24619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCTACTTAGTTA	305	False	NA	NA	False	NA	NA	NA	136954830	136955020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136954800_136955000
ES.29692.2	chr6	+	185	2	Intergenic	novelGene_24620	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTTGGA	307	False	NA	NA	False	NA	NA	NA	136954832	137015651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_136954956_137015589
ES.29693.1	chr6	-	134	1	Intergenic	novelGene_24621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	136977156	136977022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_136977000_136977200
ES.29694.1	chr6	+	4621	1	Intergenic	novelGene_24622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	137075026	137079647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_137075000_137079600
ES.29695.1	chr6	-	2661	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	-393	-6	372	0	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAATTCTTTTGTGAA	NA	False	NA	-6	True	AATAAA	-20	NA	137147123	137031822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
ES.29695.2	chr6	-	3511	5	NNC	ENSMUSG00000030222.14	novel	2262	5	NA	NA	-26	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4126131053639	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTGGAATTCTTTTG	NA	False	NA	-10	True	AATAAA	-16	NA	137146756	137031826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137034209_137034259_137034885_137043996_137044054_137141932_137142101_137146477
ES.29695.3	chr6	-	2188	5	FSM	ENSMUSG00000030222.14	ENSMUST00000032347.11	2075	5	-119	6	-119	0	multi-exon	FALSE	canonical	1	2	junction_4	19.3697573552174	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTTGGAATTCTTT	NA	False	NA	-12	True	AATAAA	-14	NA	137147614	137031828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137147435
ES.29695.4	chr6	-	2235	5	NNC	ENSMUSG00000030222.14	novel	2262	5	NA	NA	-1	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.2036506602149	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTATAATAAAAAATATAAT	NA	False	NA	-36	True	NA	NA	NA	137146731	137031852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142093_137146473
ES.29695.5	chr6	-	3292	1	Intergenic	novelGene_24623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137140160	137136868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_137136900_137140200
ES.29696.1	chr6	-	177	1	Intergenic	novelGene_24624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTATTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	137378401	137378224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_137378200_137378400
ES.29697.1	chr6	-	11909	2	Antisense	novelGene_ENSMUSG00000030223.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	137436328	137423437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_137430221_137431202
ES.29698.1	chr6	+	169	1	Intergenic	novelGene_24625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGGACTATGCACATT	NA	False	NA	NA	False	NA	NA	NA	137495182	137495351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_137495200_137495400
ES.29699.1	chr6	+	175	1	Intergenic	novelGene_24626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTGTTAGAT	NA	False	NA	NA	False	NA	NA	NA	137640400	137640575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_137640400_137640600
ES.29699.2	chr6	+	173	2	Intergenic	novelGene_24627	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGCTATTCCAGTTT	NA	False	NA	NA	False	AATAAA	-7	NA	137640403	137658887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_137640561_137658871
ES.29699.3	chr6	+	201	1	Intergenic	novelGene_24629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTCCCAATAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	137643097	137643298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_137643100_137643300
ES.297.1	chr1	+	2238	13	NIC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	49	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.1790553530972	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATTCTCATCTTCCC	NA	False	NA	3	True	AATAAA	-16	NA	36806063	36821898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_36806203_36809882_36810294_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ES.297.2	chr1	+	1261	4	NNC	ENSMUSG00000026117.11	novel	808	2	NA	NA	475	916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.49443825784929	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAATAAATAATGAAAT	NA	False	NA	NA	False	AATGAA	-38	NA	36806489	36812372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36806644_36809882_36810294_36810869_36811031_36811837
ES.297.3	chr1	+	2150	13	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	579	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	12.51970668808	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	4	True	AATAAA	-17	NA	36806593	36821899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36806644_36809882_36810294_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ES.297.4	chr1	+	3052	10	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	314	1	intron_retention	FALSE	canonical	0	0	junction_1	11.4891252930761	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36810386	36821897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36810664_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199
ES.297.5	chr1	+	3349	9	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	333	0	intron_retention	FALSE	canonical	0	0	junction_1	11.5108644332213	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	4	True	AATAAA	-17	NA	36810405	36821899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36810664_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36818394_36818765_36818973_36819917_36820111_36820199
ES.297.6	chr1	+	1939	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	339	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0288908414713	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36810411	36821897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36810664_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ES.297.7	chr1	+	1780	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	339	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0288908414713	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATTCTCATCTTCC	NA	False	NA	2	True	AATAAA	-15	NA	36810411	36821897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_36810505_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ES.297.8	chr1	+	1454	6	FSM	ENSMUSG00000026117.11	ENSMUST00000190128.2	1338	6	-113	-3	-113	0	multi-exon	FALSE	canonical	3	25	junction_2	6.93974062915899	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	4	True	AATAAA	-17	NA	36817951	36821899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
ES.2970.1	chr10	+	1649	6	NNC	ENSMUSG00000036764.13	novel	3025	5	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	13.5882302011704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATGCATTTAGGATG	NA	False	NA	NA	False	AATAAA	-16	NA	63222342	63244603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_63222555_63231563_63231643_63232447_63232523_63232715_63233158_63242780_63242986_63243967
ES.2970.2	chr10	+	1258	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	17	1750	9	-1	multi-exon	FALSE	canonical	3	25	junction_2	1.58113883008419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGCATTTAGGATGCA	NA	False	NA	NA	False	AATAAA	-18	NA	63222358	63244605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
ES.29700.1	chr6	-	4578	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	-11	0	-11	0	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTGAAAATTAGCAT	3987	False	NA	NA	False	AATAAA	-18	NA	137626294	137454242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.10	chr6	-	4066	21	FSM	ENSMUSG00000015766.15	ENSMUST00000111878.8	3560	21	0	-506	0	-3	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAATGTTTGCTTGGTA	3998	False	NA	-3	True	AATAAA	-44	NA	137626283	137454668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
ES.29700.11	chr6	-	4380	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	-240	427	-240	-4	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	3758	False	NA	-4	True	AATAAA	-43	NA	137626523	137454669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.13	chr6	-	3946	21	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-15094	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.9749636416367	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	2284	False	NA	-4	True	AATAAA	-43	NA	137646968	137454669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137646848
ES.29700.14	chr6	-	3951	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.9415423002247	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAATGTTTGCTTGGT	4028	False	NA	-4	True	AATAAA	-43	NA	137626253	137454669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137455812_137455890_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.17	chr6	-	4258	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.9002806027223	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAGAATGTTTGCTTG	4019	False	NA	-6	True	AATAAA	-41	NA	137626262	137454671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460398_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.19	chr6	-	4341	1	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	37689	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAGAATGTTTGCTTG	NA	False	NA	-6	True	AATAAA	-41	NA	137459012	137454671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137454700_137459000
ES.29700.2	chr6	-	4465	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGTTGAAAATTAGC	4018	False	NA	NA	False	AATAAA	-16	NA	137626263	137454244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.20	chr6	-	3816	20	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-240	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.5829178725035	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAGAATGTTTGCTTG	3758	False	NA	-6	True	AATAAA	-41	NA	137626523	137454671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456069_137467406_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.23	chr6	-	3960	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-5255	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	33.8561047325944	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTATCTCATCAACA	NA	False	NA	-22	True	AATAAA	-25	NA	137637129	137454687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137637057
ES.29700.25	chr6	-	4118	23	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-15079	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	43.3318923261145	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTATCTCATCAACA	2299	False	NA	-22	True	AATAAA	-25	NA	137646953	137454687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137610223_137610349_137646848
ES.29700.26	chr6	-	4116	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-5111	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	33.8561047325944	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTATCTCATCAACA	NA	False	NA	-22	True	AATAAA	-25	NA	137636985	137454687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137636757
ES.29700.28	chr6	-	4030	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	15	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	44.3487007277082	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCTTCTATCTCA	4069	False	NA	-28	True	AATAAA	-19	NA	137626212	137454693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137614592_137614653_137626049
ES.29700.29	chr6	-	4000	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-15092	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	33.8561047325944	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCTTCTATCTCA	2286	False	NA	-28	True	AATAAA	-19	NA	137646966	137454693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137646848
ES.29700.30	chr6	-	3991	22	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	30	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	44.0742004736591	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCTTCTATCTCA	4084	False	NA	-28	True	AATAAA	-19	NA	137626197	137454693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137600345_137600382_137626049
ES.29700.31	chr6	-	3869	21	NNC	ENSMUSG00000015766.15	novel	4151	21	NA	NA	-5250	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	34.6389953664941	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCTTCTATCTCA	NA	False	NA	-28	True	AATAAA	-19	NA	137637124	137454693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516395_137637057
ES.29700.32	chr6	-	3922	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-453	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.3032223456046	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTATATTAATAAATAGC	3545	False	NA	-38	True	AATAAA	-9	NA	137626736	137454703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491788_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626684
ES.29700.33	chr6	-	4001	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	28	538	-15	-115	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTAGATTCATTAATTT	4026	False	NA	-115	True	NA	NA	NA	137626255	137454780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.35	chr6	-	3887	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	-156	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATGTTGTATATTTTA	4019	False	NA	NA	False	TATAAA	-15	NA	137626262	137454821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.36	chr6	-	3805	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	-5	767	-5	165	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCGGGCCATCTTATGTG	3993	False	NA	82	True	TATAAA	-27	NA	137626288	137455009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.38	chr6	-	3591	21	NNC	ENSMUSG00000015766.15	novel	3560	21	NA	NA	0	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.4423810995859	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAGTAGCCCGTGTCG	4041	False	NA	-8	True	NA	NA	NA	137626240	137455099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504366_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
ES.29700.39	chr6	-	3625	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-5034	73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	33.8561047325944	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAAAGTAGCCCGTGT	NA	False	NA	-10	True	ATTAAA	-44	NA	137636908	137455101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137636757
ES.29700.4	chr6	-	4387	20	NIC	ENSMUSG00000015766.15	novel	3560	21	NA	NA	20	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	35.3337079023335	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCACCTGGTTGAAAATT	4018	False	NA	NA	False	AATAAA	-13	NA	137626263	137454247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137626049
ES.29700.40	chr6	-	3699	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	-10	878	-10	54	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCATATGCACTCACAAT	3988	False	NA	-29	True	ATTAAA	-25	NA	137626293	137455120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.41	chr6	-	3580	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-15	53	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGCATATGCACTCACAA	4026	False	NA	-30	True	ATTAAA	-24	NA	137626255	137455121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.42	chr6	-	3660	23	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-16645	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	43.1976286845348	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTAAGGCATATGCACT	733	False	NA	-35	True	ATTAAA	-19	NA	137648519	137455126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137647823_137647883_137648367
ES.29700.43	chr6	-	3744	22	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	33.8561047325944	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAGTAAGGCATATGC	4019	False	NA	-38	True	ATTAAA	-16	NA	137626262	137455129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568576_137626049
ES.29700.44	chr6	-	3702	23	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-6	44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	42.7983934200671	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAGAGTAAGGCATATG	4035	False	NA	-39	True	ATTAAA	-15	NA	137626246	137455130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137614592_137614653_137626049
ES.29700.45	chr6	-	3499	22	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	5	-70	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	33.102397307189	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACTTTGTTACTCTCA	4059	False	NA	NA	False	AATAGA	-18	NA	137626222	137455244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516395_137568415_137568491_137626049
ES.29700.46	chr6	-	3063	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-18	-467	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCAGACGTTCTAGA	4023	False	NA	NA	False	AATAAA	-43	NA	137626258	137455641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.47	chr6	-	2780	21	FSM	ENSMUSG00000015766.15	ENSMUST00000111878.8	3560	21	21	759	21	-759	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGTCGTCTTGGTA	4019	False	NA	NA	False	NA	NA	NA	137626262	137455933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
ES.29700.48	chr6	-	5890	5	NNC	ENSMUSG00000015766.15	novel	460	5	NA	NA	21	2722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.0566465353393	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACAGCTAGTGTTA	4019	False	NA	NA	False	NA	NA	NA	137626262	137509028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137514189_137514330_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.49	chr6	-	3233	1	Genic_Genomic	ENSMUSG00000015766.15	novel	NA	NA	NA	NA	-1135	-85639	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGCATTTAGTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	137633009	137629776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_137629800_137633000
ES.29700.5	chr6	-	4311	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	28	228	-15	195	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGCAGACTGCATTTGCT	4026	False	NA	NA	False	GATAAA	-14	NA	137626255	137454470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ES.29700.50	chr6	-	4954	1	Intergenic	novelGene_24628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTCTCAAAAAAAAAAAAAAG	2741	False	NA	NA	False	NA	NA	NA	137646511	137641557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_137641600_137646500
ES.29700.7	chr6	-	4080	21	NIC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	31.4249502784014	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGCTTGGTAGAAT	3983	False	NA	1	True	AATAAA	-24	NA	137626298	137454664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137568415_137568491_137626049
ES.29700.8	chr6	-	4184	23	NNC	ENSMUSG00000015766.15	novel	4567	22	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	42.7983934200671	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGCTTGGTAGAAT	4019	False	NA	1	True	AATAAA	-24	NA	137626262	137454664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137614592_137614653_137626049
ES.29701.10	chr6	+	2281	9	NIC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	53	413	intron_retention	FALSE	canonical	3	757	junction_8	58.9273917630842	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATAATTTTTCTCTT	NA	False	NA	82	True	AATAAA	-9	NA	137712128	137728087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137726428_137727548
ES.29701.11	chr6	+	4804	9	NIC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	53	420	intron_retention	FALSE	canonical	3	757	junction_8	61.13867433957	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTCTTTTTTTGG	NA	False	NA	89	True	AATAAA	-16	NA	137712128	137728094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137725835_137726361_137726428_137727548
ES.29701.13	chr6	+	1964	6	ISM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	6223	8	-3739	-8	3prime_fragment	FALSE	canonical	3	757	junction_5	42.2307944514427	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGAAGTCGCTTGGATT	NA	False	NA	15	True	AATAAA	-18	NA	137718298	137728922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29701.2	chr6	+	1803	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	7	840	7	416	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAATTTTTCTCTTTTT	NA	False	NA	85	True	AATAAA	-12	NA	137712082	137728090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29701.3	chr6	+	2678	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	14	-42	14	42	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCATTGCTTTCC	NA	False	NA	65	True	GATAAA	-16	NA	137712089	137728972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29701.4	chr6	+	1964	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	22	664	22	592	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTGTTCATTTA	NA	False	NA	20	True	TTTAAA	-18	NA	137712097	137728266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29701.5	chr6	+	5654	9	NIC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	38	-1	intron_retention	FALSE	canonical	3	757	junction_8	61.13867433957	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGCTTGGATTCCTGAAG	NA	False	NA	22	True	AATAAA	-25	NA	137712113	137728929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137725835_137726361_137726428_137727548
ES.29701.6	chr6	+	5502	8	NIC	ENSMUSG00000030224.11	novel	2650	10	NA	NA	47	585	intron_retention	FALSE	canonical	3	757	junction_7	62.631412865678	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATCTTTTGTTGTGTGT	NA	False	NA	13	True	ACTAAA	-43	NA	137712122	137728259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137726428_137727548
ES.29701.7	chr6	+	2323	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	48	279	48	-279	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTTGCTTTCTGGTA	NA	False	NA	NA	False	AATACA	-14	NA	137712123	137728651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29701.9	chr6	+	1609	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	988	53	268	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCTTAAAGAAGAATGCCT	NA	False	NA	-63	True	AATATA	-21	NA	137712128	137727942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ES.29702.1	chr6	+	1317	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-30	442	-18	-5	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCTGTACTGCAGAAAAT	NA	False	NA	124	True	AATAAA	-11	NA	137731525	137814450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.10	chr6	+	5748	6	NNC	ENSMUSG00000030225.12	novel	1446	8	NA	NA	-1	7749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	247.864963236033	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGCAGAGCTCAAGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	137731552	137767724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137762537
ES.29702.11	chr6	+	1165	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	2	562	2	-104	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTAAATGTGGATTCA	NA	False	NA	4	True	AATAAA	-16	NA	137731557	137814330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.12	chr6	+	1469	7	NIC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	232.265413314644	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTATTTTGTTTA	NA	False	NA	15	True	AATACA	-15	NA	137731564	137814887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137731637_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.13	chr6	+	1589	8	NIC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	0	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	215.641141809295	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAAAAATCTCTGTG	NA	False	NA	-6	True	AAGAAA	-23	NA	137731573	137814866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137731637_137755121_137755220_137756507_137756656_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.14	chr6	+	1711	9	NNC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	207.020983236	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTATTTTGTTTA	NA	False	NA	15	True	AATACA	-15	NA	137731574	137814887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807184_137807304_137813731_137813882_137814113
ES.29702.16	chr6	+	1646	8	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	23565	3	130	-3	3prime_fragment	FALSE	canonical	3	541	junction_5	39.9131710653237	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	515	False	NA	17	True	AATACA	-17	NA	137755120	137814889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.2	chr6	+	1755	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-25	-1	-13	1	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTGTTTATTTTCG	NA	False	NA	21	True	AATACA	-21	NA	137731530	137814893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.3	chr6	+	1620	8	NIC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	215.145418311449	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTTGTTTAT	NA	False	NA	16	True	AATACA	-16	NA	137731531	137814888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137807190_137807304_137813731_137813882_137814113
ES.29702.4	chr6	+	1543	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	-18	204	-6	-204	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGAATGGGTGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	137731537	137814688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.5	chr6	+	5888	6	NNC	ENSMUSG00000030225.12	novel	1446	8	NA	NA	-6	7749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	306.962277812763	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGCAGAGCTCAAGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	137731537	137767724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757602_137757824_137759926_137760062_137762537
ES.29702.6	chr6	+	2688	7	NNC	ENSMUSG00000030225.12	novel	1446	8	NA	NA	-4	7749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	291.798446420356	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGCAGAGCTCAAGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	137731539	137767724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137762537_137763026_137766098
ES.29702.7	chr6	+	1820	9	NNC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	206.137052406888	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	NA	False	NA	17	True	AATACA	-17	NA	137731542	137814889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757646_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29702.8	chr6	+	1754	9	NNC	ENSMUSG00000030225.12	novel	1729	9	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	204.835566674833	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	NA	False	NA	17	True	AATACA	-17	NA	137731548	137814889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_137731637_137755121_137755220_137756507_137756656_137757706_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ES.29703.1	chr6	-	173	2	Intergenic	novelGene_24630	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAATAAAAAAGAATTTA	NA	False	NA	NA	False	NA	NA	NA	138093198	137932830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_137932955_138093149
ES.29704.1	chr6	-	154	1	Intergenic	novelGene_24631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	138569063	138568909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_138568900_138569100
ES.29705.1	chr6	+	164	1	Intergenic	novelGene_24632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGCAAACAGTGAG	NA	False	NA	NA	False	NA	NA	NA	138948356	138948520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_138948400_138948500
ES.29706.1	chr6	-	175	1	Intergenic	novelGene_24633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCACATTGAC	NA	False	NA	NA	False	NA	NA	NA	139953820	139953645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_139953600_139953800
ES.29707.1	chr6	-	86	1	Intergenic	novelGene_24634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCCATGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	140152494	140152408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140152400_140152500
ES.29708.1	chr6	+	172	1	Intergenic	novelGene_24635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTAAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	140309246	140309418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140309200_140309400
ES.29709.1	chr6	+	4371	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-179	2	combination_of_known_junctions	FALSE	canonical	3	34	junction_24	15.4811152878452	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGTTAGAATCTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	140369600	140542838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.29709.10	chr6	+	4599	27	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	29.8457821150522	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369653	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526185_140526262_140527693_140527815_140529558_140529779_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.13	chr6	+	2312	12	ISM	ENSMUSG00000030231.12	ENSMUST00000203517.3	3006	23	-232	33470	-125	0	5prime_fragment	FALSE	canonical	3	72	junction_4	11.9184557211436	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGGGTTTTTGATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	140369654	140498755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440
ES.29709.15	chr6	+	4483	27	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	25.6365412745306	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369665	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526185_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.16	chr6	+	3944	20	NNC	ENSMUSG00000030231.12	novel	3006	23	NA	NA	-108	1094	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	22.4435271594583	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTCTGAACTTTTAT	NA	False	NA	NA	False	NA	NA	NA	140369671	140530760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489443_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558
ES.29709.18	chr6	+	4205	25	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.2647429362305	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369715	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482419_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.29709.19	chr6	+	3928	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	0	-2956	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	12.1857726696158	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTAATGTGTATGTGTG	NA	False	NA	NA	False	GGGGCT	-44	NA	140369779	140539880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
ES.29709.2	chr6	+	4456	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-163	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	11.9895954894233	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369616	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.20	chr6	+	4303	26	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.7992247945554	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCACTGGTGTTAGAA	NA	False	NA	12	True	AATAAA	-12	NA	140369785	140542831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471546_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.22	chr6	+	4915	33	Fusion	ENSMUSG00000030232.19_ENSMUSG00000030231.12	novel	7382	31	NA	NA	46	-389	multi-exon	FALSE	canonical	0	0	junction_25	94.0830698023693	736	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGGGTTGCACACCAA	NA	False	NA	NA	False	AATAAA	-19	NA	140369825	140623809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140623116
ES.29709.23	chr6	+	4106	25	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	31.9380639763207	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369827	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140525155_140525203_140526185_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.29709.24	chr6	+	4627	25	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	51	-2205	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	26.0503985360856	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGGAAT	NA	False	NA	NA	False	AATAAA	-10	NA	140369830	140540631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482377_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
ES.29709.25	chr6	+	5051	27	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.9771362579025	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369843	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140481087_140482419_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526188_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.26	chr6	+	197	1	Intergenic	novelGene_24636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTAATATTATGGTTAG	NA	False	NA	NA	False	NA	NA	NA	140377534	140377731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140377500_140377700
ES.29709.27	chr6	+	178	1	Intergenic	novelGene_24637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGAAGGCT	NA	False	NA	NA	False	NA	NA	NA	140392703	140392881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140392700_140392900
ES.29709.28	chr6	+	224	1	Intergenic	novelGene_24638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	140475353	140475577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140475400_140475600
ES.29709.29	chr6	+	5805	16	Fusion	ENSMUSG00000030232.19_ENSMUSG00000030231.12	novel	1845	10	NA	NA	-66	283	intron_retention	FALSE	canonical	0	0	junction_9	120.289465688212	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTATTTCCTTTAGA	6544	False	NA	NA	False	AATAAA	-19	NA	140522982	140600427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.3	chr6	+	4401	26	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-138	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	27.5171510153213	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369641	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526185_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.29709.30	chr6	+	4091	5	ISM	ENSMUSG00000030231.12	ENSMUST00000203483.2	1845	10	9028	3	4595	-3	intron_retention	FALSE	canonical	3	61	junction_4	18.405162319306	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	1114	False	NA	14	True	AATAAA	-14	NA	140532076	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
ES.29709.31	chr6	+	1722	1	Intergenic	novelGene_24639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1074	False	NA	NA	False	NA	NA	NA	140544798	140546520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140544800_140546500
ES.29709.32	chr6	+	3369	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	-91	2654	-91	1	multi-exon	FALSE	canonical	3	55	junction_1	98.0522559554811	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAATTGTAACAATTCA	NA	False	NA	NA	False	AATAAA	-21	NA	140568297	140598553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.33	chr6	+	4243	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	1	1688	1	-625	multi-exon	FALSE	canonical	3	55	junction_1	98.0522559554811	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCACATGTGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	140568389	140599519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.34	chr6	+	2605	9	NIC	ENSMUSG00000030232.19	novel	5932	8	NA	NA	138	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	104.343108900396	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCAAATTGTAACAATT	NA	False	NA	NA	False	AATAAA	-19	NA	140568526	140598551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.35	chr6	+	3551	9	NIC	ENSMUSG00000030232.19	novel	5932	8	NA	NA	160	-625	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	104.343108900396	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCACATGTGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	140568548	140599519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.36	chr6	+	3446	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-40	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	102.668687412473	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGATGACTGTGGTT	NA	False	NA	7	True	NA	NA	NA	140569184	140601206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
ES.29709.37	chr6	+	3771	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-38	-6	-38	6	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAACAATTCAATTTA	NA	False	NA	NA	False	AATAAA	-26	NA	140569186	140598558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.38	chr6	+	4719	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-22	-970	-22	-622	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCACATGTGTCTATC	NA	False	NA	NA	False	AATAAA	-24	NA	140569202	140599522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.39	chr6	+	3223	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-21	8	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAACAATTCAATTTAAT	NA	False	NA	NA	False	AATAAA	-28	NA	140569203	140598560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.4	chr6	+	4320	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-138	-2702	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	12.1857726696158	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGGAGTGAGAATCT	NA	False	NA	NA	False	AGTAAA	-12	NA	140369641	140540134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
ES.29709.40	chr6	+	4185	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-21	-622	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCACATGTGTCTATC	NA	False	NA	NA	False	AATAAA	-24	NA	140569203	140599522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.41	chr6	+	2679	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-20	1068	-20	14	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTTTTTAACTTT	NA	False	NA	NA	False	AATAAA	-32	NA	140569204	140597484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.43	chr6	+	2644	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-19	281	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	102.668687412473	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTATTATTTCCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	140569205	140600425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
ES.29709.44	chr6	+	3246	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-19	-180	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	102.668687412473	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTCCTCAGGACCTG	NA	False	NA	NA	False	AATAAA	-25	NA	140569205	140601027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
ES.29709.45	chr6	+	5864	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGATGACTGTGGTT	NA	False	NA	7	True	NA	NA	NA	140569208	140601206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.46	chr6	+	6412	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-16	-2669	-16	14	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTTGTGTGTAAGGTG	NA	False	NA	22	True	NA	NA	NA	140569208	140601221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.47	chr6	+	3091	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-13	-116	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTACTAGTATTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	140569211	140598436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.48	chr6	+	6205	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	-1	-2477	-1	-178	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCCTCAGGACCTGTC	NA	False	NA	NA	False	AATAAA	-27	NA	140569223	140601029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.49	chr6	+	6030	9	FSM	ENSMUSG00000030232.19	ENSMUST00000095350.11	2575	9	-180	-3275	10	3275	multi-exon	FALSE	canonical	0	0	junction_8	108.504320190488	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACAACAGAATATGTAAAA	NA	False	NA	NA	False	NA	NA	NA	140569234	140627473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140623116
ES.29709.50	chr6	+	3603	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	10	114	10	-114	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTACTAGTATTTTTAT	NA	False	NA	NA	False	AATAGA	-17	NA	140569234	140598438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.51	chr6	+	3462	11	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.902099354768	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTTCAAATTGTAACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	140569236	140598550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579623_140583385_140583494_140583848_140584003_140586365_140586494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.52	chr6	+	5692	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	12	-1977	12	385	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTCTTTCCCAAGTT	NA	False	NA	NA	False	TTTAAA	-17	NA	140569236	140600529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.53	chr6	+	1870	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	16	-625	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	107.887673067872	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCACATGTGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	140569240	140599519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599316
ES.29709.54	chr6	+	1743	7	ISM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	27	4627	27	-191	5prime_fragment	FALSE	canonical	3	238	junction_4	45.0175891550551	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTGGATTTTGTCTT	NA	False	NA	NA	False	AATATA	-11	NA	140569251	140593925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697
ES.29709.55	chr6	+	6367	7	ISM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	28	2	28	-2	intron_retention	FALSE	canonical	3	238	junction_4	45.0175891550551	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTTCAAATTGTAACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	140569252	140598550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697
ES.29709.56	chr6	+	2689	8	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	40	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	115.066085714396	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGATGCTCTGTGGA	NA	False	NA	NA	False	ATTAAA	-13	NA	140569264	140624189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140623116
ES.29709.57	chr6	+	3581	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	40	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	108.504320190488	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCAAATTGTAACAATT	NA	False	NA	NA	False	AATAAA	-19	NA	140569264	140598551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140569480_140569584_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.58	chr6	+	4422	8	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	41	1725	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	115.066085714396	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTCTCAACAGGTA	NA	False	NA	NA	False	NA	NA	NA	140569265	140625923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140623116
ES.29709.59	chr6	+	2083	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	42	13	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGAATTTTTTTAACTT	NA	False	NA	NA	False	AATAAA	-31	NA	140569266	140597483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.6	chr6	+	4322	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-131	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	20.8844373211782	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369648	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.60	chr6	+	5022	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	47	283	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATTATTTCCTTTAGA	NA	False	NA	NA	False	AATAAA	-19	NA	140569271	140600427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.61	chr6	+	2714	9	FSM	ENSMUSG00000030232.19	ENSMUST00000095350.11	2575	9	-141	2	49	-2	multi-exon	FALSE	canonical	0	0	junction_8	108.504320190488	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCTGTGGAAACTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	140569273	140624196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140623116
ES.29709.62	chr6	+	5615	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	56	-178	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCCTCAGGACCTGTC	NA	False	NA	NA	False	AATAAA	-27	NA	140569280	140601029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.67	chr6	+	3954	10	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	90	-625	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.957333142785	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCACATGTGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	140569314	140599519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140569559_140569675_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.68	chr6	+	5504	8	NNC	ENSMUSG00000030232.19	novel	3727	8	NA	NA	-90	281	intron_retention	FALSE	canonical	0	0	junction_1	115.832215038893	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTATTATTTCCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	140569324	140600425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570075_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.69	chr6	+	3709	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-50	8	intron_retention	FALSE	canonical	1	1	junction_3	151.16418019822	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAACAATTCAATTTAAT	NA	False	NA	NA	False	AATAAA	-28	NA	140569364	140598560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579609_140583385_140583494_140586365_140586494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.7	chr6	+	4502	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	26.6037591328744	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369653	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.29709.70	chr6	+	3034	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	115.195418203156	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTTCAAATTGTAACAA	NA	False	NA	NA	False	AATAAA	-17	NA	140569367	140598549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579609_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.71	chr6	+	3158	10	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	144.200820189103	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTTCAAATTGTAACAA	NA	False	NA	NA	False	AATAAA	-17	NA	140569371	140598549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579609_140583385_140583494_140586365_140586494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.72	chr6	+	3506	8	NNC	ENSMUSG00000030232.19	novel	3727	8	NA	NA	22	5	intron_retention	FALSE	canonical	2	5	junction_2	112.918428206256	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAACAATTCAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	140569436	140598557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579609_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.74	chr6	+	4194	8	NNC	ENSMUSG00000030232.19	novel	3727	8	NA	NA	298	-623	intron_retention	FALSE	canonical	2	5	junction_2	112.918428206256	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCACATGTGTCTAT	NA	False	NA	NA	False	AATAAA	-23	NA	140569712	140599521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579609_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ES.29709.75	chr6	+	4192	13	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	404	20186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.11113864856	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATCTGGCA	NA	False	NA	NA	False	NA	NA	NA	140569818	140644384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140623116_140625159_140625784_140625941_140628612_140628813_140629985_140630154_140643847
ES.29709.76	chr6	+	175	1	Intergenic	novelGene_24641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTTTGAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	140578185	140578360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_140578200_140578400
ES.29709.77	chr6	+	3573	8	ISM	ENSMUSG00000030232.19	ENSMUST00000161335.8	2524	9	5579	3	-4277	-3	3prime_fragment	FALSE	canonical	3	123	junction_7	77.0499440463848	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTTCAAATTGTAACAA	NA	False	NA	NA	False	AATAAA	-17	NA	140578186	140598549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ES.29709.78	chr6	+	2645	9	NNC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	-3051	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	139.477540754775	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTATATTCTGATGACT	NA	False	NA	1	True	NA	NA	NA	140579412	140601200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140598623_140598713_140599483
ES.29709.79	chr6	+	2652	3	ISM	ENSMUSG00000030232.19	ENSMUST00000162100.7	1109	6	3246	-794	-408	-2	intron_retention	FALSE	canonical	3	297	junction_2	14	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTTCAAATTGTAACAAT	481	False	NA	NA	False	AATAAA	-18	NA	140592134	140598550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_140592604_140593697_140593812_140596481
ES.29709.8	chr6	+	4608	27	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	24.6783149904776	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369653	140542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ES.29709.80	chr6	+	6056	2	FSM	ENSMUSG00000030232.19	ENSMUST00000160772.2	480	2	-182	-5394	-182	-634	multi-exon	FALSE	canonical	3	325	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCCTCAAGTATTTTCA	707	False	NA	NA	False	AATAAA	-12	NA	140592360	140599510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_140592604_140593697
ES.29709.81	chr6	+	6019	1	NIC	ENSMUSG00000030232.19	novel	5932	8	NA	NA	2456	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTCAGTAATTCTGTCC	3345	False	NA	NA	False	AATAAA	-15	NA	140594998	140601017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_140595000_140601000
ES.29709.82	chr6	+	4073	2	NNC	ENSMUSG00000030232.19	novel	1109	6	NA	NA	4312	-189	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCAGTAATTCTGTCCT	5201	False	NA	NA	False	AATAAA	-16	NA	140596854	140601018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140599393_140599483
ES.29709.9	chr6	+	4274	25	NNC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3547149058457	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	False	NA	14	True	AATAAA	-14	NA	140369653	140542833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_140369944_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ES.2971.1	chr10	-	180	1	Intergenic	novelGene_2311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAC	7248	False	NA	NA	False	NA	NA	NA	63236904	63236724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63236700_63236900
ES.29710.1	chr6	-	3773	6	Antisense	novelGene_ENSMUSG00000030231.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140541954	140529158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_140529674_140532033_140532232_140534902_140535040_140535369_140535479_140537350_140537489_140539278
ES.29710.2	chr6	-	6324	5	Antisense	novelGene_ENSMUSG00000030231.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	140542144	140529158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_140532232_140534902_140535040_140535369_140535478_140537348_140537489_140539278
ES.29711.1	chr6	-	933	1	Intergenic	novelGene_24640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140548348	140547415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140547400_140548300
ES.29712.1	chr6	-	1855	1	FSM	ENSMUSG00000107750.2	ENSMUST00000204392.2	2262	1	-1504	1911	-1504	-1911	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140569653	140567798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_140567800_140569700
ES.29713.1	chr6	-	177	1	Intergenic	novelGene_24642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	140585269	140585092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140585100_140585300
ES.29714.1	chr6	-	403	1	Intergenic	novelGene_24643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	ATTAAA	-12	NA	140586114	140585711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140585700_140586100
ES.29715.1	chr6	-	173	1	Intergenic	novelGene_24644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTAAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	140587444	140587271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140587300_140587400
ES.29716.1	chr6	-	268	1	Intergenic	novelGene_24645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTCATAACAACAGCAA	NA	False	NA	NA	False	NA	NA	NA	140630983	140630715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_140630700_140631000
ES.29717.1	chr6	-	298	1	FSM	ENSMUSG00000080921.5	ENSMUST00000117356.2	213	1	-44	-41	-44	41	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	140692942	140692644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_140692600_140692900
ES.29718.1	chr6	+	6926	16	FSM	ENSMUSG00000041741.11	ENSMUST00000043259.10	12302	16	441	4935	-256	-4935	multi-exon	FALSE	canonical	0	0	junction_1	0.711805216802087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTTATAGAAGTGGAG	NA	False	NA	NA	False	AATAAA	-45	NA	141195435	141448239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_141196270_141350907_141350959_141404781_141405037_141405409_141405565_141411842_141411968_141416667_141416888_141422466_141422553_141425051_141425207_141426841_141426980_141429579_141429692_141433221_141433336_141433484_141433685_141434524_141434729_141435835_141435992_141437857_141438117_141444377
ES.29719.1	chr6	-	137	1	Intergenic	novelGene_24646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	141260537	141260400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_141260400_141260500
ES.2972.1	chr10	-	178	1	Intergenic	novelGene_2312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACGCAGG	2865	False	NA	NA	False	NA	NA	NA	63241287	63241109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63241100_63241300
ES.29720.1	chr6	-	959	4	Intergenic	novelGene_24647	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141546892	141516733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_141517294_141517401_141517610_141518165_141518227_141546762
ES.29721.1	chr6	+	179	1	Intergenic	novelGene_24648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTATCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	141908576	141908755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_141908600_141908800
ES.29722.1	chr6	+	1796	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	-69	1104	-69	102	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291310	142307879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.10	chr6	+	3780	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	25	-974	1	974	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTAGACCAGCACAGAC	NA	False	NA	NA	False	NA	NA	NA	142291404	142309957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.11	chr6	+	2168	12	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	11	573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	18.3068428700245	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGAAGTTGTTTCAA	NA	False	NA	NA	False	AATACA	-14	NA	142291414	142308350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304243_142304761_142304885_142306584_142306723_142307479
ES.29722.12	chr6	+	4011	11	NIC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	26	102	intron_retention	FALSE	canonical	3	42	junction_4	7.99312204335703	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291429	142307879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.13	chr6	+	3345	6	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	1725	-590	intron_retention	FALSE	canonical	0	0	junction_3	24.9367199126108	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGACATGAACATACA	1963	False	NA	NA	False	TATAAA	-41	NA	142300390	142308393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142302310_142303105_142303239_142304124_142304243_142304761_142304885_142306584_142306723_142307479
ES.29722.14	chr6	+	815	3	ISM	ENSMUSG00000041671.14	ENSMUST00000137098.8	3011	10	13199	-97	5937	97	3prime_fragment	FALSE	canonical	3	58	junction_1	7.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAACTCGTTTAATGAC	1021	False	NA	7	True	AATAAA	-12	NA	142304602	142307874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142304885_142306584_142306723_142307479
ES.29722.2	chr6	+	1756	12	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	-37	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	18.516912082144	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291342	142307879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302216_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.3	chr6	+	1645	11	NIC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	1	102	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.1843686369919	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291380	142307879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142291534_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.4	chr6	+	1745	12	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	4	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.1927240019622	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGTTTAATGACTCATT	NA	False	NA	12	True	AATAAA	-17	NA	142291383	142307879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300328_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.5	chr6	+	2298	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	4	529	4	-529	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGTTTTCTTTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	142291383	142308454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.7	chr6	+	2082	11	NIC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	-3	591	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	19.1457567100389	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTATAGCAGATTATA	NA	False	NA	NA	False	TATAAA	-16	NA	142291400	142308368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304761_142304885_142306584_142306723_142307479
ES.29722.8	chr6	+	1749	13	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	-1	101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.7783705884918	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTAATGACTCAT	NA	False	NA	11	True	AATAAA	-16	NA	142291402	142307878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142298409_142298456_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29722.9	chr6	+	3799	12	NNC	ENSMUSG00000041671.14	novel	2831	12	NA	NA	1	971	intron_retention	FALSE	canonical	0	0	junction_5	18.1927240019622	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACTAGACCAGCACA	NA	False	NA	NA	False	NA	NA	NA	142291404	142309954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300328_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ES.29723.1	chr6	+	2849	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	-30	-1	-30	1	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTCAAGTTTATCTTT	NA	False	NA	26	True	AATAAA	-20	NA	142332916	142349585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29723.10	chr6	+	4884	4	NIC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	15	0	intron_retention	FALSE	canonical	3	595	junction_2	20.0720922897661	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332961	142349584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142333096_142338055_142338148_142339653_142341996_142347268
ES.29723.12	chr6	+	810	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	15	1993	15	155	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCATGGTGTCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	142332961	142347591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29723.13	chr6	+	6390	3	NIC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	15	0	intron_retention	FALSE	canonical	3	616	junction_1	14	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332961	142349584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142333096_142338055_142341996_142347268
ES.29723.14	chr6	+	589	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	33	2196	1	-48	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGGGTGTAAAGTTCCT	NA	False	NA	NA	False	ATTAAA	-8	NA	142332979	142347388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29723.15	chr6	+	4373	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	33	-1588	1	1588	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTCCTGAATCCTGTA	NA	False	NA	NA	False	AATAAA	-29	NA	142332979	142351172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29723.16	chr6	+	4263	2	ISM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	5346	-424	5346	424	3prime_fragment	FALSE	canonical	3	644	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTGGAGCCAGATAA	NA	False	NA	73	True	AATAAA	-25	NA	142338324	142347860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142341996_142347268
ES.29723.17	chr6	+	4324	1	NIC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	12281	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTCAAGTTTATCT	NA	False	NA	24	True	AATAAA	-18	NA	142345259	142349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142345300_142349600
ES.29723.2	chr6	+	2734	5	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_3	259.236378619977	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTCAAGTTTATCT	NA	False	NA	24	True	AATAAA	-18	NA	142332925	142349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142341913_142341996_142347268
ES.29723.3	chr6	+	1119	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	-7	1706	-7	442	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTGAACTACATAGT	NA	False	NA	91	True	AATAAA	-43	NA	142332939	142347878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29723.4	chr6	+	2074	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	1	-707	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTCACACCTTTCCTG	NA	False	NA	18	True	AATAAA	-29	NA	142332947	142348877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
ES.29723.5	chr6	+	3172	4	NIC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	2	423	intron_retention	FALSE	canonical	3	595	junction_2	20.0720922897661	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTTTGGAGCCAGATA	NA	False	NA	72	True	AATAAA	-24	NA	142332948	142347859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142333096_142338055_142338148_142339653_142341996_142347268
ES.29723.6	chr6	+	820	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-29	-424	3	424	multi-exon	FALSE	canonical	3	32	junction_1	306	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTGGAGCCAGATAA	NA	False	NA	73	True	AATAAA	-25	NA	142332949	142347860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142341913_142341996_142347268
ES.29723.7	chr6	+	2542	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-28	-2147	4	-1	multi-exon	FALSE	canonical	3	32	junction_1	306	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTCAAGTTTATCT	NA	False	NA	24	True	AATAAA	-18	NA	142332950	142349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142341913_142341996_142347268
ES.29723.8	chr6	+	2778	6	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	283.233190145505	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332950	142349584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142333096_142338055_142338148_142339653_142339729_142339832_142339901_142341913_142341996_142347268
ES.29723.9	chr6	+	2096	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	15	707	15	-707	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTCACACCTTTCCTG	NA	False	NA	18	True	AATAAA	-29	NA	142332961	142348877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ES.29724.1	chr6	-	2154	16	FSM	ENSMUSG00000030243.17	ENSMUST00000032370.13	2112	16	-30	-12	8	12	multi-exon	TRUE	canonical	2	2	junction_1	39.7130820875047	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTTGTGCCTTAATG	6201	False	NA	NA	False	TTTAAA	-28	NA	142332792	142296055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142296272_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.10	chr6	-	4840	12	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	2396	-12	intron_retention	FALSE	canonical	3	123	junction_2	18.2163308803887	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCACTTCTGGAAAGAGG	8689	False	NA	NA	False	AATAAA	-14	NA	142330304	142307113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
ES.29724.11	chr6	-	3392	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	-127	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGATGAAGTCTTTAT	6210	False	NA	NA	False	CATAAA	-13	NA	142332783	142307228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
ES.29724.12	chr6	-	2801	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	4	222	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCGTTTCACCAATTAAG	6197	False	NA	-1	True	ATTAAA	-20	NA	142332796	142307624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
ES.29724.13	chr6	-	2853	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	12	524	-1	221	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6192	False	NA	-2	True	ATTAAA	-19	NA	142332801	142307625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.14	chr6	-	2704	16	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-2	221	intron_retention	FALSE	canonical	0	0	junction_12	40.1566930909406	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6229	False	NA	-2	True	ATTAAA	-19	NA	142332764	142307625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322555_142322666_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.15	chr6	-	2979	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-5	221	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6226	False	NA	-2	True	ATTAAA	-19	NA	142332767	142307625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
ES.29724.16	chr6	-	2887	16	NNC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	221	intron_retention	FALSE	canonical	0	0	junction_4	65.3185017178645	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6193	False	NA	-2	True	ATTAAA	-19	NA	142332800	142307625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312999_142313118_142313206_142313356_142313499_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322555_142322666_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.18	chr6	-	7563	11	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	18	215	intron_retention	FALSE	canonical	0	0	junction_10	47.5605929315437	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAAGTCCGTTTCACC	6211	False	NA	-8	True	ATTAAA	-13	NA	142332782	142307631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142310382_142311241_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330250
ES.29724.19	chr6	-	2787	16	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	16	124	intron_retention	FALSE	canonical	0	0	junction_12	49.9695907527768	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCCTCTATGTCGA	6209	False	NA	-99	True	NA	NA	NA	142332784	142307722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322555_142322666_142322687_142323878_142324077_142330254_142330303_142332587
ES.29724.2	chr6	-	4987	16	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_1	39.7130820875047	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATGATGGCTTTTT	6198	False	NA	NA	False	AATAAA	-24	NA	142332795	142302672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142305719_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.20	chr6	-	4164	13	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	113	junction_12	19.6468827043885	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTCTGGTGTCTGCA	6185	False	NA	-1	True	ATTAAA	-38	NA	142332808	142307848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.21	chr6	-	2603	15	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	-7	intron_retention	FALSE	canonical	0	0	junction_2	53.435828384166	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACATCCAGTCTGGTGT	6210	False	NA	-6	True	ATTAAA	-33	NA	142332783	142307853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309401_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313111_142313201_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.22	chr6	-	5747	11	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	5	-25	intron_retention	FALSE	canonical	3	113	junction_10	20.4560504496836	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTTATTTCTTTC	6198	False	NA	-24	True	ATTAAA	-15	NA	142332795	142307871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.23	chr6	-	2903	15	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-379	-25	intron_retention	FALSE	canonical	0	0	junction_14	41.1659161571952	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTTATTTCTTTC	5801	False	NA	-24	True	ATTAAA	-15	NA	142333192	142307871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332842
ES.29724.24	chr6	-	2623	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	-6	772	-6	-27	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6174	False	NA	-26	True	ATTAAA	-13	NA	142332819	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.25	chr6	-	2523	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-5	-27	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6226	False	NA	-26	True	ATTAAA	-13	NA	142332767	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
ES.29724.26	chr6	-	5016	14	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	46	772	-5	-27	intron_retention	FALSE	canonical	3	123	junction_2	17.5735142292845	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6226	False	NA	-26	True	ATTAAA	-13	NA	142332767	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
ES.29724.27	chr6	-	4052	13	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-27	intron_retention	FALSE	canonical	3	113	junction_12	13.4164078649987	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6181	False	NA	-26	True	ATTAAA	-13	NA	142332812	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.28	chr6	-	7344	8	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	15	-27	intron_retention	FALSE	canonical	3	113	junction_7	13.9430327857789	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6208	False	NA	-26	True	ATTAAA	-13	NA	142332785	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.29	chr6	-	2884	15	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-17	-27	intron_retention	FALSE	non_canonical	0	0	junction_12	52.9051905173157	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6214	False	NA	-26	True	ATTAAA	-13	NA	142332779	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323880_142324077_142330254_142330303_142332444
ES.29724.3	chr6	-	5633	1	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	995	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATGATGGCTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	142308305	142302672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142302700_142308300
ES.29724.30	chr6	-	3375	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-27	intron_retention	FALSE	canonical	3	113	junction_13	18.7307297424951	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTTCTTTATTTCTT	6181	False	NA	-26	True	ATTAAA	-13	NA	142332812	142307873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.31	chr6	-	3662	15	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-15	-28	intron_retention	FALSE	canonical	0	0	junction_11	62.0845374945998	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATTTTCTTTATTTCT	6216	False	NA	-27	True	ATTAAA	-12	NA	142332777	142307874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142310382_142311241_142311334_142312392_142312537_142312999_142313118_142313206_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322555_142322666_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.33	chr6	-	6222	13	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	14	-29	intron_retention	FALSE	canonical	3	4	junction_6	43.2887591259748	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6207	False	NA	-28	True	ATTAAA	-11	NA	142332786	142307875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
ES.29724.35	chr6	-	4986	12	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	3	-29	intron_retention	FALSE	canonical	3	113	junction_11	20.4599992729211	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6196	False	NA	-28	True	ATTAAA	-11	NA	142332797	142307875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.36	chr6	-	2151	12	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	-29	intron_retention	FALSE	canonical	2	2	junction_2	45.371924912306	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTTTATTTC	6193	False	NA	-28	True	ATTAAA	-11	NA	142332800	142307875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.37	chr6	-	4397	14	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	16	-31	intron_retention	FALSE	canonical	1	1	junction_5	54.252750591519	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGAATTTTCTTTATT	6209	False	NA	-30	True	ATTAAA	-9	NA	142332784	142307877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142313118_142313206_142313356_142313499_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.38	chr6	-	2394	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	35	960	-16	-215	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGTGTGTCAGCAAGAA	6215	False	NA	NA	False	GATAAA	-13	NA	142332778	142308061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.39	chr6	-	2255	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	9	318	combination_of_known_splicesites	FALSE	canonical	2	13	junction_13	39.2829215944293	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCTCTCCTTTCCAA	6202	False	NA	NA	False	TTTAAA	-15	NA	142332791	142308165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
ES.29724.4	chr6	-	6509	11	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	4	intron_retention	FALSE	canonical	3	113	junction_10	20.4560504496836	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGACCTATCTTAGAAT	6210	False	NA	NA	False	AATAAA	-30	NA	142332783	142307097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.40	chr6	-	5376	11	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	237	intron_retention	FALSE	canonical	3	113	junction_10	20.4560504496836	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTGTAAGCCCGTTC	6194	False	NA	NA	False	AATATA	-19	NA	142332799	142308246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.41	chr6	-	4892	12	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-16	206	intron_retention	FALSE	non_canonical	0	0	junction_11	59.1013976705422	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGTAATATATCTCACA	6215	False	NA	NA	False	AATACA	-20	NA	142332778	142308277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142310382_142311241_142313118_142313206_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332749
ES.29724.42	chr6	-	2956	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	204	intron_retention	FALSE	canonical	3	113	junction_13	18.7307297424951	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAATGTAATATATCTCA	6194	False	NA	NA	False	AATACA	-18	NA	142332799	142308279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.43	chr6	-	4831	13	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-5	197	intron_retention	FALSE	canonical	1	1	junction_4	55.9185916211137	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTGTCTAAATGTAATA	6226	False	NA	NA	False	AATACA	-11	NA	142332767	142308286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142313118_142313206_142313356_142313499_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.44	chr6	-	3513	12	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	192	intron_retention	FALSE	canonical	1	1	junction_1	41.4641137282919	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAAGTTGTCTAAATG	6210	False	NA	NA	False	AATACA	-6	NA	142332783	142308291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142310382_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.45	chr6	-	1946	15	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	41.1502969463831	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCATGTCTGGGTCAT	6194	False	NA	NA	False	NA	NA	NA	142332799	142308411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322555_142323865_142324077_142330254_142330303_142332747
ES.29724.46	chr6	-	3696	12	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-5	349	intron_retention	FALSE	canonical	1	1	junction_3	54.6713698171717	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTCCTTTAAGGATTGT	6226	False	NA	NA	False	AAAACA	-16	NA	142332767	142309997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142310382_142311241_142313118_142313206_142313356_142313499_142313786_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.47	chr6	-	3655	1	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	-6501	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCTCTGTGAGTAGT	6193	False	NA	NA	False	ATTAAA	-14	NA	142332800	142329145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142329100_142332800
ES.29724.5	chr6	-	3325	14	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	1	-2	intron_retention	FALSE	canonical	2	13	junction_13	39.2829215944293	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGAGGAGACCTATCT	6194	False	NA	NA	False	AATAAA	-24	NA	142332799	142307103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142332747
ES.29724.6	chr6	-	5786	12	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	113	junction_11	20.4599992729211	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGAGGAGACCTATCT	6168	False	NA	NA	False	AATAAA	-24	NA	142332825	142307103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.7	chr6	-	3513	15	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	17	-6	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAAGAGGAGACCT	6210	False	NA	NA	False	AATAAA	-20	NA	142332783	142307107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
ES.29724.8	chr6	-	3355	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	28	6	15	-6	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGGAAAGAGGAGACCT	6208	False	NA	NA	False	AATAAA	-20	NA	142332785	142307107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ES.29724.9	chr6	-	3071	16	NNC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.9695907527768	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTCTGGAAAGAGGAGAC	6247	False	NA	NA	False	AATAAA	-18	NA	142332746	142307109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142308129_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
ES.29725.1	chr6	-	2908	1	Antisense	novelGene_ENSMUSG00000030245.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGATTCACACATGAAA	NA	False	NA	NA	False	NA	NA	NA	142350699	142347791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_142347800_142350700
ES.29726.1	chr6	-	173	1	Intergenic	novelGene_24649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	142420453	142420280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_142420300_142420500
ES.29727.1	chr6	+	185	1	Intergenic	novelGene_24650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGACTGTAT	NA	False	NA	NA	False	NA	NA	NA	142446334	142446519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_142446300_142446500
ES.29728.1	chr6	-	1359	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	-47	-8	-47	8	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTTTCTCTGGTTCCT	NA	False	NA	4	True	AATAAA	-27	NA	142453730	142435966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ES.29728.2	chr6	-	4658	6	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	7	4	intron_retention	FALSE	canonical	3	781	junction_1	45.2442261509687	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTTTCTCTGGT	NA	False	NA	0	True	AATAAA	-23	NA	142453662	142435970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ES.29728.3	chr6	-	2786	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGCCTGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	142453683	142435975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ES.29728.4	chr6	-	1442	8	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	281.760717703544	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGCCTGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	142453509	142435975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453265
ES.29728.5	chr6	-	1267	8	NNC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	287.163822973037	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGCCTGCCTTTTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	142453683	142435975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451173_142451273_142453578
ES.29728.6	chr6	-	5510	6	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	24	1	intron_retention	FALSE	canonical	3	685	junction_1	76.9612889704948	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGCCTGCCTTTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	142453645	142435976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142436331_142438218_142439944_142441293_142444405_142447065_142447184_142451137_142451273_142453578
ES.29728.7	chr6	-	2957	8	NNC	ENSMUSG00000030246.13	novel	1287	8	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_1	380.67587584319	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTCTGCCTGCCTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	142453645	142435977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142436331_142437473_142437685_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ES.29729.1	chr6	+	1785	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	-27	2	-27	-2	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTACTGTAAGAC	NA	False	NA	31	True	AATAAA	-20	NA	142702384	142721438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.10	chr6	+	4085	8	NNC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.472045634116	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTATTTATTGTGTGA	NA	False	NA	1	True	ATTAAA	-12	NA	142702471	142720382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142702753_142703774_142704337_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.11	chr6	+	2215	6	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-6	-1180	combination_of_known_junctions	FALSE	canonical	2	19	junction_3	287.807296641346	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATGTATGGCTTAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	142702473	142719210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142702753_142710012_142710156_142710279_142710436_142716248_142716344_142716891_142717064_142717840
ES.29729.14	chr6	+	4571	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	63	7	-5	-7	intron_retention	FALSE	canonical	3	691	junction_3	53.4189417092227	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTCTGTACTGT	NA	False	NA	26	True	AATAAA	-15	NA	142702474	142721433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.15	chr6	+	1917	4	FSM	ENSMUSG00000030282.15	ENSMUST00000204147.2	625	4	-26	-1266	-5	-1178	multi-exon	FALSE	canonical	3	37	junction_1	333.043540697009	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTATGGCTTAAACAC	NA	False	NA	NA	False	ATTAAA	-19	NA	142702474	142719212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142702753_142716248_142716344_142716891_142717064_142717840
ES.29729.16	chr6	+	926	6	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	69	4423	1	-43	5prime_fragment	FALSE	canonical	3	691	junction_3	56.577734136319	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACGCTATTGGCATAA	NA	False	NA	NA	False	AAAAAG	-20	NA	142702480	142717017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891
ES.29729.17	chr6	+	3630	6	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	3	-4	intron_retention	FALSE	canonical	3	691	junction_2	58.0227541573132	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTATTGTGTGAGTTT	NA	False	NA	5	True	ATTAAA	-16	NA	142702492	142720386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142702753_142710012_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.18	chr6	+	1428	7	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	91	-9	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	274.564301313109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAAGTTTCTGTACT	NA	False	NA	24	True	AATAAA	-13	NA	142702591	142721431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142702753_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.19	chr6	+	2125	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	286	2230	197	-1180	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATGTATGGCTTAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	142702697	142719210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.2	chr6	+	3605	7	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	-14	1050	-14	0	5prime_fragment	FALSE	canonical	3	691	junction_3	53.4189417092227	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGTGAGTTTGATC	NA	False	NA	9	True	ATTAAA	-20	NA	142702397	142720390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.20	chr6	+	2730	5	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-5672	-7	intron_retention	FALSE	canonical	3	681	junction_4	67.1509493603776	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTCTGTACTGT	NA	False	NA	26	True	AATAAA	-15	NA	142710019	142721433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142710156_142710279_142710436_142713529_142713664_142716248_142717995_142720875
ES.29729.21	chr6	+	1233	6	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-5634	-7	combination_of_known_junctions	FALSE	canonical	2	19	junction_2	283.663603587066	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTCTGTACTGT	NA	False	NA	26	True	AATAAA	-15	NA	142710057	142721433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142710156_142710279_142710436_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.22	chr6	+	6617	3	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-4299	-2	intron_retention	FALSE	canonical	3	681	junction_2	11	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTACTGTAAGAC	NA	False	NA	31	True	AATAAA	-20	NA	142711392	142721438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142716344_142716891_142717995_142720875
ES.29729.23	chr6	+	1783	5	ISM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	10453	2	-2827	-2	3prime_fragment	FALSE	canonical	3	681	junction_4	66.5544889545401	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTACTGTAAGAC	NA	False	NA	31	True	AATAAA	-20	NA	142712864	142721438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.3	chr6	+	1576	8	NNC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	261.175052719944	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTCTGTACTGT	NA	False	NA	26	True	AATAAA	-15	NA	142702462	142721433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142716938_142717840_142717995_142720875
ES.29729.4	chr6	+	3254	5	FSM	ENSMUSG00000030282.15	ENSMUST00000144920.4	3236	5	-26	8	-16	-8	multi-exon	FALSE	canonical	2	19	junction_2	361.225258668327	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTATTTATTGTGTGA	NA	False	NA	1	True	ATTAAA	-12	NA	142702463	142720382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142702753_142710279_142710436_142716248_142716344_142716891_142717064_142717840
ES.29729.5	chr6	+	3391	6	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	299.314282986963	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGTGAGTTTGAT	NA	False	NA	8	True	ATTAAA	-19	NA	142702467	142720389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142702753_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840
ES.29729.6	chr6	+	7381	6	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	681	junction_5	32.6006134911599	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTACTGTAAGAC	NA	False	NA	31	True	AATAAA	-20	NA	142702467	142721438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142702753_142710012_142710156_142710279_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.7	chr6	+	8960	7	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	681	junction_6	58.9559628498726	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTCTGTACTGTAAG	NA	False	NA	29	True	AATAAA	-18	NA	142702467	142721436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.29729.8	chr6	+	1623	8	NNC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	265.957952791529	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAAGTTTCTGTACT	NA	False	NA	24	True	AATAAA	-13	NA	142702468	142721431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_142702753_142710012_142710156_142710279_142710436_142713600_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ES.2973.1	chr10	-	245	1	Intergenic	novelGene_2313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAGAAAAAAGAAAT	1880	False	NA	NA	False	NA	NA	NA	63242272	63242027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63242000_63242300
ES.29730.1	chr6	-	1067	1	ISM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	141839	2	60427	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAAGCTTCTGACGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	142768339	142767272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_142767300_142768300
ES.29731.1	chr6	+	3461	1	FSM	ENSMUSG00000107839.2	ENSMUST00000203259.2	387	1	-659	-2415	-659	2415	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTGTCTGATATTTT	NA	False	NA	NA	False	NA	NA	NA	142934676	142938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_142934700_142938100
ES.29732.1	chr6	-	5015	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	329	3647	18	3040	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGGTAGTGTCCTTTG	NA	False	NA	NA	False	AATAAA	-41	NA	142909849	142770917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
ES.29732.2	chr6	-	3017	1	ISM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	135386	4505	53974	2182	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGCCTCTCCAGAATCA	4279	False	NA	NA	False	AGTAAA	-16	NA	142774792	142771775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_142771800_142774800
ES.29732.3	chr6	-	1941	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	309	6741	-2	-54	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACCCTTCCTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	142909869	142774011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
ES.29732.4	chr6	-	1463	5	NNC	ENSMUSG00000030283.8	novel	8991	5	NA	NA	-25259	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.88960949469487	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAGATCCGTCTTAT	NA	False	NA	NA	False	AATATA	-17	NA	142935437	142774120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142935198
ES.29732.5	chr6	-	1667	5	FSM	ENSMUSG00000030283.8	ENSMUST00000032421.4	8991	5	271	7053	-40	263	multi-exon	FALSE	canonical	2	8	junction_4	3.11247489949718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTATAGTGTTGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	142909907	142774323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142774997_142813579_142813673_142822373_142822484_142859749_142859895_142909261
ES.29733.1	chr6	+	174	1	Intergenic	novelGene_24651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	142953967	142954141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_142954000_142954100
ES.29734.1	chr6	+	162	1	Intergenic	novelGene_24652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	142986418	142986580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_142986400_142986600
ES.29735.1	chr6	+	4184	1	Antisense	novelGene_ENSMUSG00000030279.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCACAAAACCAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	143008052	143012236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_143008100_143012200
ES.29735.2	chr6	+	4526	1	Antisense	novelGene_ENSMUSG00000030279.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCTTTCTAAACGTTAT	NA	False	NA	NA	False	NA	NA	NA	143011248	143015774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_143011200_143015800
ES.29736.1	chr6	+	179	1	Antisense	novelGene_ENSMUSG00000030279.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	143017165	143017344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_143017200_143017300
ES.29737.1	chr6	+	2505	1	Intergenic	novelGene_24653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAAAACCCAAACT	NA	False	NA	NA	False	NA	NA	NA	143036973	143039478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_143037000_143039500
ES.29738.1	chr6	+	1438	3	Antisense	novelGene_ENSMUSG00000108094.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTTCTTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	143054194	143061981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_143054237_143056864_143056934_143060654
ES.29739.1	chr6	-	4302	28	NNC	ENSMUSG00000030279.16	novel	3332	28	NA	NA	6	14041	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.0825920688275	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAGCACCCAGTCCATC	NA	False	NA	NA	False	NA	NA	NA	143045861	142942604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142942612_142956658_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
ES.29739.10	chr6	-	6571	25	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_10	35.2833766335744	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045821	142956652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980886_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.11	chr6	-	4359	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	-59	-806	11	1	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045856	142956652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.12	chr6	-	6441	25	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	14	1	intron_retention	FALSE	canonical	3	4	junction_24	34.4141191551116	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045853	142956652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
ES.29739.13	chr6	-	4019	24	NNC	ENSMUSG00000030279.16	novel	3332	28	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	45.050905884155	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045791	142956652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965126_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.15	chr6	-	4127	24	NIC	ENSMUSG00000030279.16	novel	4292	25	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.8223932245279	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTAACTCTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	143045866	142956652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.16	chr6	-	5504	15	NNC	ENSMUSG00000030279.16	novel	3332	28	NA	NA	5968	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.5851627191589	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	142989946	142956653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959061_142963642_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077
ES.29739.18	chr6	-	4997	12	ISM	ENSMUSG00000030279.16	ENSMUST00000111758.9	4062	24	58300	0	8712	0	intron_retention	FALSE	canonical	3	38	junction_3	38.2060529149354	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	2541	False	NA	NA	False	AATAAA	-16	NA	142987202	142956653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548
ES.29739.19	chr6	-	4300	26	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.5601124857613	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTCCTAACTCTTTGCC	NA	False	NA	NA	False	AATAAA	-15	NA	143045544	142956654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975955_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ES.29739.2	chr6	-	3995	24	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-1893	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.0214263817881	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTTGCCTCTTTTGTG	6126	False	NA	NA	False	AATAAA	-24	NA	143029039	142956645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959061_142963642_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888
ES.29739.21	chr6	-	4392	27	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	43.1858512881162	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTCCTAACTCTTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	143045816	142956655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965126_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045399_143045523_143045658
ES.29739.25	chr6	-	4339	26	NNC	ENSMUSG00000030279.16	novel	3332	28	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.7822464822836	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATTCCTAACTCTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	143045827	142956656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142976001_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.27	chr6	-	4649	28	NNC	ENSMUSG00000030279.16	novel	3332	28	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	43.5907202467724	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	NA	False	NA	NA	False	AATAAA	-9	NA	143045866	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143014286_143014473_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.3	chr6	-	4316	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	-29	5	5	0	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045862	142956650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.30	chr6	-	4760	30	Fusion	ENSMUSG00000030279.16_ENSMUSG00000108094.2	novel	3332	28	NA	NA	6136	-7	multi-exon	FALSE	canonical	0	0	junction_27	54.1622831239468	327	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	6620	False	NA	NA	False	AATAAA	-9	NA	143093521	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143079148_143079283_143079429_143079500_143092984_143093105_143093340
ES.29739.31	chr6	-	1625	4	NNC	ENSMUSG00000030279.16	novel	4062	24	NA	NA	2275	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.5419275081747	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	NA	False	NA	NA	False	AATAAA	-9	NA	142965298	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965213
ES.29739.32	chr6	-	4214	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-17	-7	combination_of_known_junctions	FALSE	canonical	3	4	junction_25	42.4726924034726	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	NA	False	NA	NA	False	AATAAA	-9	NA	143045884	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
ES.29739.33	chr6	-	4700	29	Fusion	ENSMUSG00000030279.16_ENSMUSG00000108094.2	novel	3332	28	NA	NA	6126	-7	multi-exon	FALSE	canonical	0	0	junction_27	49.4529641504461	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	6610	False	NA	NA	False	AATAAA	-9	NA	143093531	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143079148_143079283_143092984_143093105_143093340
ES.29739.34	chr6	-	4026	2	FSM	ENSMUSG00000030279.16	ENSMUST00000204635.2	909	2	-2313	-804	-2313	-7	multi-exon	FALSE	canonical	3	182	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	3066	False	NA	NA	False	AATAAA	-9	NA	142961751	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142957863_142958927
ES.29739.35	chr6	-	4287	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	3	4	junction_26	34.3139007835345	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	NA	False	NA	NA	False	AATAAA	-9	NA	143045855	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
ES.29739.37	chr6	-	4458	27	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.2461337004274	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACACATTCCTAACTC	NA	False	NA	NA	False	AATAAA	-9	NA	143045798	142956660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142976001_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.39	chr6	-	4334	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	1	-136	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAGGATTTTATTCT	NA	False	NA	NA	False	AATAAA	-11	NA	143045866	142956789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.4	chr6	-	4469	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045862	142956650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.40	chr6	-	3866	29	Fusion	ENSMUSG00000030279.16_ENSMUSG00000108094.2	novel	3332	28	NA	NA	6165	3	multi-exon	FALSE	canonical	0	0	junction_27	49.4529641504461	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGCTTATCAAGAGTC	6649	False	NA	NA	False	AATAAA	-20	NA	143093492	142957455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143079148_143079283_143092984_143093105_143093340
ES.29739.41	chr6	-	3664	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGCTTATCAAGAGTC	NA	False	NA	NA	False	AATAAA	-20	NA	143045862	142957455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.42	chr6	-	3470	25	FSM	ENSMUSG00000030279.16	ENSMUST00000171349.8	4292	25	12	810	-5	3	multi-exon	FALSE	canonical	3	38	junction_3	28.9653768412489	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGCTTATCAAGAGTC	NA	False	NA	NA	False	AATAAA	-20	NA	143045821	142957455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.43	chr6	-	3494	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_26	34.3139007835345	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAAAGCTTATCAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	143045860	142957458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
ES.29739.44	chr6	-	3644	24	FSM	ENSMUSG00000030279.16	ENSMUST00000204655.3	3526	24	-369	251	5	0	multi-exon	FALSE	canonical	3	38	junction_3	28.8381180218075	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAAAGCTTATCAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	143045862	142957458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ES.29739.45	chr6	-	3425	25	ISM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	198	7	-24	-1	3prime_fragment	FALSE	canonical	3	13	junction_3	32.8933461694341	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAATGGAAAGCTT	NA	False	NA	NA	False	AATAAA	-10	NA	143045599	142957465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ES.29739.46	chr6	-	4275	25	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	-4	-2457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1793538305314	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	143045820	142960119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142961429_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.47	chr6	-	4494	25	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	1	-2459	intron_retention	FALSE	canonical	0	0	junction_1	35.3364778474973	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	143045803	142960121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142961429_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ES.29739.48	chr6	-	4329	26	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	23	-2459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.995405412711	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	143045774	142960121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142961429_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.49	chr6	-	5086	2	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	-6754	4205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATTGTTAGAGTTAC	NA	False	NA	NA	False	AAGAAA	-40	NA	142974327	142968833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142969966_142970373
ES.29739.50	chr6	-	4438	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	58	88	22	-88	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTGTGATTGTGAGC	NA	False	NA	NA	False	TTTAAA	-27	NA	143045775	142973126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.51	chr6	-	3052	23	NNC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	13	-98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.7347898638228	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTTTCTATGTTTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	143045854	142973136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142973431_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.53	chr6	-	3502	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	58	1024	22	-1024	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGAATGTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	143045775	142974062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.54	chr6	-	2874	22	FSM	ENSMUSG00000030279.16	ENSMUST00000203349.3	4584	22	45	1665	9	-1665	multi-exon	FALSE	canonical	3	110	junction_6	17.6396276203619	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCCAGTGTATATATT	NA	False	NA	NA	False	NA	NA	NA	143045788	142974703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.55	chr6	-	8799	7	NIC	ENSMUSG00000030279.16	novel	4584	22	NA	NA	2	143	intron_retention	FALSE	canonical	3	115	junction_6	19.6779628575273	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTAAGCGACTAGCCGTA	NA	False	NA	NA	False	NA	NA	NA	143045802	143016162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.56	chr6	-	1622	4	FSM	ENSMUSG00000030279.16	ENSMUST00000205079.2	836	4	-13	-773	-1	773	multi-exon	FALSE	canonical	3	115	junction_3	14.8398861930347	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATGGGCTCTGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	143045817	143027803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_143029061_143036324_143036412_143045403_143045523_143045658
ES.29739.57	chr6	-	217	1	Intergenic	novelGene_24654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGAGGAAATAGACTTCA	6689	False	NA	NA	False	NA	NA	NA	143051222	143051005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_143051000_143051200
ES.29739.6	chr6	-	4291	27	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	34.780652480686	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAACTCTTTGCCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	143045863	142956650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045837
ES.29739.9	chr6	-	4399	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	48.6582531540128	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTAACTCTTTGCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	143045821	142956651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143019388_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ES.2974.1	chr10	-	177	1	Intergenic	novelGene_2314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAGAAGAAAGAAA	546	False	NA	NA	False	NA	NA	NA	63243606	63243429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63243400_63243600
ES.29740.1	chr6	+	6167	8	NNC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	-2592	0	intron_retention	FALSE	canonical	1	1	junction_1	91.480565572973	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143110354	143154272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143110496_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.10	chr6	+	4291	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	8	2134	8	-2134	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTCCCCTTTTCTA	NA	False	NA	NA	False	AATATA	-17	NA	143112963	143152138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.11	chr6	+	6335	7	NIC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_6	96.9921245371098	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCATGTGGTTCA	NA	False	NA	22	True	AATAAA	-35	NA	143112976	143154269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143149109
ES.29740.12	chr6	+	1728	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	22	4683	-2	-4683	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAACCTTTGTAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	143112977	143149589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.16	chr6	+	6394	8	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	91.8243665140919	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTCCATGTGGTTC	NA	False	NA	21	True	AATAAA	-34	NA	143112981	143154268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113351_143126309_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.17	chr6	+	6553	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_4	114.030081009355	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTCCATGTGGTTC	NA	False	NA	21	True	AATAAA	-34	NA	143112983	143154268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138535_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.18	chr6	+	6436	8	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	91.8243665140919	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143112983	143154272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126281_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.19	chr6	+	6111	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	88.2311417527848	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTCCATGTGGTTC	NA	False	NA	21	True	AATAAA	-34	NA	143112997	143154268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109_143150278_143150553
ES.29740.2	chr6	+	6471	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	-36	-2	-27	2	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCATGTGGTTCATACTC	NA	False	NA	27	True	AATAAA	-40	NA	143112919	143154274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.20	chr6	+	2751	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	52	3630	28	-3630	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTCTAGCCACATATAT	NA	False	NA	NA	False	AATAAA	-25	NA	143113007	143150642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.21	chr6	+	14973	7	NIC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	28	-5	intron_retention	FALSE	canonical	3	241	junction_3	15.2725243493013	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGTGTCCATGTGGTT	NA	False	NA	20	True	AATAAA	-33	NA	143113007	143154267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.22	chr6	+	1258	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	254	4921	230	-4921	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTCAGTGTGTGGCG	NA	False	NA	NA	False	NA	NA	NA	143113209	143149351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.23	chr6	+	6218	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	263	-3	intron_retention	FALSE	canonical	2	6	junction_5	113.143644872348	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCATGTGGTTCA	NA	False	NA	22	True	AATAAA	-35	NA	143113242	143154269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138139_143138215_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.24	chr6	+	3671	8	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	310	-4799	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	92.2461215378485	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTACTTTGATCTTTC	NA	False	NA	NA	False	NA	NA	NA	143113289	143149473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138586_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.25	chr6	+	3306	1	Intergenic	novelGene_24656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTTTGTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	143115220	143118526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_143115200_143118500
ES.29740.26	chr6	+	5626	5	ISM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	19258	3	19234	-3	3prime_fragment	FALSE	canonical	3	230	junction_1	19.9687255477159	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCATGTGGTTCA	NA	False	NA	22	True	AATAAA	-35	NA	143132213	143154269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.27	chr6	+	5696	6	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	19289	-1	intron_retention	FALSE	canonical	0	0	junction_2	133.176574516692	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCCATGTGGTTCATA	NA	False	NA	24	True	AATAAA	-37	NA	143132268	143154271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143132361_143138586_143138710_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.28	chr6	+	1949	5	NNC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	25605	-3636	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	114.711594880378	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTAAATTCTAGCCAC	NA	False	NA	NA	False	AATAAA	-19	NA	143138584	143150636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.29	chr6	+	7361	4	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	26114	-3	intron_retention	FALSE	canonical	2	2	junction_1	128.820288257194	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCATGTGGTTCA	NA	False	NA	22	True	AATAAA	-35	NA	143139093	143154269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143141042_143143112_143143292_143148804_143148879_143149109
ES.29740.3	chr6	+	3105	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	-14	3342	-5	-3342	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTCTTTCCTCCTTA	NA	False	NA	NA	False	GATAAA	-16	NA	143112941	143150930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.30	chr6	+	7226	4	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	26232	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	131.091147255979	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCATGTGGTTCA	NA	False	NA	22	True	AATAAA	-35	NA	143139211	143154269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143141042_143143130_143143292_143148803_143148879_143149109
ES.29740.31	chr6	+	7591	1	NIC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	33700	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	23	True	AATAAA	-36	NA	143146679	143154270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_143146700_143154300
ES.29740.4	chr6	+	6493	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_5	114.450248470678	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	23	True	AATAAA	-36	NA	143112943	143154270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138139_143138190_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.5	chr6	+	1633	1	NIC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	2	-23427	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAAAGGCAGTTCTGCT	NA	False	NA	NA	False	AATAAA	-25	NA	143112948	143114581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_143112900_143114600
ES.29740.6	chr6	+	1643	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	-7	4797	2	-4797	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACTTTGATCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	143112948	143149475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.7	chr6	+	6231	10	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	109.918937583595	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTCCATGTGGTTC	NA	False	NA	21	True	AATAAA	-34	NA	143112962	143154268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109_143149738_143149858_143150105_143150174
ES.29740.8	chr6	+	6524	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	8	-2	intron_retention	FALSE	canonical	2	6	junction_4	112.716943602104	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCCATGTGGTTCAT	NA	False	NA	23	True	AATAAA	-36	NA	143112963	143154270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138586_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ES.29740.9	chr6	+	9243	8	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	8	0	intron_retention	FALSE	canonical	2	8	junction_4	91.5546006378663	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143112963	143154272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138139_143141042_143143130_143143292_143148804_143148879_143149109
ES.29741.1	chr6	-	1448	1	Intergenic	novelGene_24655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143112864	143111416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_143111400_143112900
ES.29742.1	chr6	-	1608	1	Antisense	novelGene_ENSMUSG00000030275.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACATACCCAAGGTTAG	NA	False	NA	NA	False	NA	NA	NA	143130626	143129018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_143129000_143130600
ES.29743.1	chr6	-	248	1	Intergenic	novelGene_24657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTAAGTATTTTTT	NA	False	NA	NA	False	GATAAA	-3	NA	143147923	143147675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_143147700_143147900
ES.29744.1	chr6	-	5917	2	Intergenic	novelGene_24658	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTAATTCTTTTCT	NA	False	NA	NA	False	TTTAAA	-5	NA	144116100	144110118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_144110473_144110537
ES.29745.1	chr6	+	166	1	Intergenic	novelGene_24659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	144301069	144301235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_144301100_144301200
ES.29746.1	chr6	+	3794	2	Antisense	novelGene_ENSMUSG00000030268.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	144976986	144983624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_144978163_144981006
ES.29746.2	chr6	+	3779	2	Antisense	novelGene_ENSMUSG00000030268.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	144976987	144983624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_144978169_144981026
ES.29746.3	chr6	+	5028	2	Antisense	novelGene_ENSMUSG00000030268.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAAAACACTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	144976987	144983653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_144978629_144980266
ES.29747.1	chr6	+	5571	1	Genic_Genomic	ENSMUSG00000086643.2	novel	NA	NA	NA	NA	-3226	-1159	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAAACCATGGAACTT	NA	False	NA	NA	False	NA	NA	NA	144998888	145004459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_144998900_145004500
ES.29747.10	chr6	+	2844	19	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	-49	3	intron_retention	FALSE	canonical	3	7	junction_2	14.613540144522	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGGCTGGAACGCCT	NA	False	NA	14	True	AATAAA	-19	NA	145067415	145120657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145067833_145083185_145083813_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.11	chr6	+	4548	17	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	14	junction_2	13.0952042748481	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCAGTGTGGCTGGAA	NA	False	NA	9	True	AATAAA	-14	NA	145067431	145120652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145067833_145083185_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.12	chr6	+	2340	20	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	15.9512762278257	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145067478	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145067833_145083185_145083334_145083771_145083813_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.13	chr6	+	5737	13	NNC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_1	15.1813116107345	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTGTGGCTGGAAC	NA	False	NA	10	True	AATAAA	-15	NA	145067517	145120653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145067831_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145117812_145119429_145119538_145120162
ES.29747.14	chr6	+	2608	18	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	236	-1	intron_retention	FALSE	canonical	3	14	junction_2	13.4009244116406	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTGTGGCTGGAAC	NA	False	NA	10	True	AATAAA	-15	NA	145067742	145120653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145067833_145083185_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.15	chr6	+	3019	16	NIC	ENSMUSG00000030263.14	novel	2319	19	NA	NA	237	0	intron_retention	FALSE	canonical	3	14	junction_2	13.7281543632865	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145067743	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145067833_145083185_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.16	chr6	+	5222	14	NIC	ENSMUSG00000030263.14	novel	1761	17	NA	NA	-28	-1	intron_retention	FALSE	canonical	1	3	junction_1	14.4938264760263	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTGTGGCTGGAAC	NA	False	NA	10	True	AATAAA	-15	NA	145091171	145120653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.17	chr6	+	1742	7	NIC	ENSMUSG00000030263.14	novel	1761	17	NA	NA	3038	0	intron_retention	FALSE	canonical	3	39	junction_1	7.27247474309048	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145106510	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117812_145119429_145119538_145120162
ES.29747.18	chr6	+	1324	9	NNC	ENSMUSG00000030263.14	novel	938	5	NA	NA	-4643	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4068951855292	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145110587	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145110770_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.19	chr6	+	3631	5	NIC	ENSMUSG00000030263.14	novel	1761	17	NA	NA	-817	0	intron_retention	FALSE	canonical	3	43	junction_1	6.97764286847643	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145114413	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.2	chr6	+	4296	18	Fusion	ENSMUSG00000030263.14_ENSMUSG00000086643.2	novel	635	9	NA	NA	-24	0	intron_retention	TRUE	canonical	0	0	junction_1	15.9761933615383	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145002090	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_145002150_145057422_145057511_145083185_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.3	chr6	+	213	1	Intergenic	novelGene_24664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACGGGAACCATGCTGC	NA	False	NA	NA	False	AAAAAG	-6	NA	145009645	145009858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_145009600_145009900
ES.29747.4	chr6	+	2348	21	NNC	ENSMUSG00000030263.14	novel	635	9	NA	NA	-32388	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4610280338816	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145028990	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145029105_145029930_145030089_145057379_145057511_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.5	chr6	+	2056	20	NNC	ENSMUSG00000030263.14	novel	938	5	NA	NA	-23288	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6225074555903	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145038090	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145038202_145057422_145057511_145083907_145083990_145090674_145090735_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.6	chr6	+	2697	19	NNC	ENSMUSG00000030263.14	novel	635	9	NA	NA	-23268	-1	intron_retention	FALSE	canonical	1	3	junction_1	15.9067498678399	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTGTGGCTGGAAC	NA	False	NA	10	True	AATAAA	-15	NA	145038110	145120653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145038202_145057422_145057511_145083185_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.7	chr6	+	2199	20	NNC	ENSMUSG00000030263.14	novel	2065	20	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.2591380378061	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145061361	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145061458_145064883_145065041_145083185_145083334_145083907_145083990_145093361_145093410_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29747.9	chr6	+	2368	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	-55	6	-55	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145067409	145120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ES.29748.1	chr6	-	2631	13	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	146898	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1772.14326256529	2687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAACCAACCAACCAA	8571	False	NA	NA	False	NA	NA	NA	145021824	144792662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144792690_144877931_144878063_144944878_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.10	chr6	-	5404	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-4	2433	-4	-2433	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	2658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAAACAGTTTTGAAT	NA	False	NA	NA	False	AATACA	-18	NA	144994542	144941993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ES.29748.11	chr6	-	2893	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1237.32990346148	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAGATGGGGCCTTT	8571	False	NA	NA	False	AGTAAA	-17	NA	145021824	144944458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.12	chr6	-	2893	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	86	-423	86	423	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTGGAGATGGGGCCT	8571	False	NA	NA	False	AGTAAA	-15	NA	145021824	144944460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.13	chr6	-	4165	5	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	19151	24	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	1769.86713837508	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACACTTTGAACCCTTCT	NA	False	NA	0	True	AATAAA	-40	NA	144959418	144944859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144956117_144956981
ES.29748.14	chr6	-	3883	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-15897	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1180.44491542262	2658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACACTTTGAACCCTT	9934	False	NA	-2	True	AATAAA	-38	NA	145037807	144944861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614_145023159_145037750
ES.29748.16	chr6	-	2581	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	-61	5313	-61	10	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGAATCTTAATCTACA	NA	False	NA	-14	True	AATAAA	-26	NA	144994599	144944873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ES.29748.17	chr6	-	2878	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-319	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1237.32990346148	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8166	False	NA	-19	True	AATAAA	-21	NA	145022229	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.18	chr6	-	2594	10	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-152	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1707.75243962986	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8333	False	NA	-19	True	AATAAA	-21	NA	145022062	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144980266_144980378_144985160_144985362_144993017_144993091_145021614
ES.29748.2	chr6	-	4990	1	Intergenic	novelGene_24660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAGAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144840733	144835743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_144835700_144840700
ES.29748.20	chr6	-	2682	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	103	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1564.62492534946	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8588	False	NA	-19	True	AATAAA	-21	NA	145021807	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145020351_145020576_145021614
ES.29748.22	chr6	-	4520	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	131	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1236.70407131213	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8616	False	NA	-19	True	AATAAA	-21	NA	145021779	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961395_144962904_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.23	chr6	-	2603	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	47	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1564.62492534946	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8532	False	NA	-19	True	AATAAA	-21	NA	145021863	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145018213_145018303_145021614
ES.29748.24	chr6	-	2493	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	132	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1531.09006703996	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGATTTGAATCTTAAT	8617	False	NA	-19	True	AATAAA	-21	NA	145021778	144944878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144948662_144948727_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.25	chr6	-	2399	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1229.0432091672	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8621	False	NA	-21	True	AATAAA	-19	NA	145021774	144944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993066_145021614
ES.29748.26	chr6	-	2398	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1237.94219978156	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGATTTGAATCTTA	8621	False	NA	-21	True	AATAAA	-19	NA	145021774	144944880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980291_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.27	chr6	-	2382	11	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	3143	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	1224.34884326323	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	9864	False	NA	-22	True	AATAAA	-18	NA	145018767	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145018647
ES.29748.28	chr6	-	2558	12	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	98	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1525.29289965962	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144994238	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144993165_144993381_144994157
ES.29748.29	chr6	-	2752	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-152	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1571.00806190755	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8333	False	NA	-22	True	AATAAA	-18	NA	145022062	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144976071_144976114_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.3	chr6	-	517	2	Intergenic	novelGene_24661	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGCAGACTTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	144930092	144907261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_144907643_144929956
ES.29748.30	chr6	-	2358	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	1266.44691076167	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8484	False	NA	-22	True	AATAAA	-18	NA	145021911	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144993017_144993090_145021614
ES.29748.31	chr6	-	2564	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	2	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_11	1507.73835882678	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8571	False	NA	-22	True	AATAAA	-18	NA	145021824	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145021614
ES.29748.32	chr6	-	2752	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-266	2	combination_of_known_splicesites	FALSE	canonical	3	151	junction_9	1239.05241571488	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8219	False	NA	-22	True	AATAAA	-18	NA	145022176	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_145021614
ES.29748.33	chr6	-	2127	8	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	1423.55806029133	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8484	False	NA	-22	True	AATAAA	-18	NA	145021911	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144993017_144993090_145021614
ES.29748.34	chr6	-	2076	9	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	142	2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	1906.12773378386	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8627	False	NA	-22	True	AATAAA	-18	NA	145021768	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144993017_144993090_145002586_145002679_145021614
ES.29748.37	chr6	-	2294	10	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1289.60485861291	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8621	False	NA	-22	True	AATAAA	-18	NA	145021774	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950161_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.39	chr6	-	2498	11	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1591.68087567829	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144994526	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ES.29748.4	chr6	-	7691	11	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	3156	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	1224.34884326323	2681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGCCCAGTGTCGTGAA	9877	False	NA	-4	True	AATAAA	-17	NA	145018754	144939559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145018647
ES.29748.40	chr6	-	4853	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	142	2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_6	1232.19016389517	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8627	False	NA	-22	True	AATAAA	-18	NA	145021768	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144976071_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.43	chr6	-	2401	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	215	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1566.25797670332	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8700	False	NA	-22	True	AATAAA	-18	NA	145021695	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144992317_144992376_144993017_144993090_145021614
ES.29748.44	chr6	-	2677	11	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	142	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	1231.70940160413	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8627	False	NA	-22	True	AATAAA	-18	NA	145021768	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961579_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.45	chr6	-	2415	10	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	93	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1282.85195396915	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8578	False	NA	-22	True	AATAAA	-18	NA	145021817	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978663_144985133_144985362_144993017_144993090_145021614
ES.29748.46	chr6	-	2443	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	133	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1235.41931747889	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8618	False	NA	-22	True	AATAAA	-18	NA	145021777	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965100_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.47	chr6	-	2258	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	2	combination_of_known_splicesites	FALSE	canonical	1	79	junction_5	1276.04232872243	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8621	False	NA	-22	True	AATAAA	-18	NA	145021774	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.49	chr6	-	1918	7	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	1516.31183578225	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8621	False	NA	-22	True	AATAAA	-18	NA	145021774	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_145021614
ES.29748.5	chr6	-	8206	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	-327	-5323	-327	0	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGCCCAGTGTCGTGA	8158	False	NA	-5	True	AATAAA	-16	NA	145022237	144939560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.50	chr6	-	2321	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1180.44491542262	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8478	False	NA	-22	True	AATAAA	-18	NA	145021917	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144945256_144945499_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.51	chr6	-	4914	3	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	37507	5321	21538	2	intron_retention	FALSE	canonical	3	4219	junction_2	56	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144957031	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_144946031_144950076_144950152_144953341
ES.29748.52	chr6	-	5542	4	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	34586	5321	18617	2	3prime_fragment	FALSE	canonical	3	3523	junction_3	357.432821971097	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144959952	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775
ES.29748.53	chr6	-	5856	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	103	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1236.70407131213	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8588	False	NA	-22	True	AATAAA	-18	NA	145021807	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144963515_144963713_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.54	chr6	-	2304	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	153	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1180.44491542262	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8638	False	NA	-22	True	AATAAA	-18	NA	145021757	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144945340_144945440_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.55	chr6	-	1360	3	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	25086	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2165.5	2637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144953483	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953347
ES.29748.56	chr6	-	2300	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	82	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1180.44491542262	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8567	False	NA	-22	True	AATAAA	-18	NA	145021828	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144944967_144945142_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.58	chr6	-	2485	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	133	2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	1669.80587324425	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8618	False	NA	-22	True	AATAAA	-18	NA	145021777	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961579_144964917_144965082_144978508_144978629_144980266_144980378_144993017_144993090_145021614
ES.29748.59	chr6	-	1903	7	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	16109	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1931.36045890513	2639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144962460	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144962112_144962371_144962409
ES.29748.6	chr6	-	8192	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-317	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1237.32990346148	2683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTTGCCCAGTGTCGT	8168	False	NA	-7	True	AATAAA	-14	NA	145022227	144939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.61	chr6	-	3363	11	NNC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	222	2	intron_retention	FALSE	canonical	3	17	junction_6	1623.20511334828	2640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	NA	False	NA	-22	True	AATAAA	-18	NA	144994114	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144961502_144961579_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017
ES.29748.64	chr6	-	2564	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-326	2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_11	1173.13490448977	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8159	False	NA	-22	True	AATAAA	-18	NA	145022236	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614_145021756_145022075
ES.29748.65	chr6	-	2429	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	213	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1541.42249961328	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8698	False	NA	-22	True	AATAAA	-18	NA	145021697	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993082_145002586_145002679_145021614
ES.29748.67	chr6	-	2273	10	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	198	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1263.6237133296	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8683	False	NA	-22	True	AATAAA	-18	NA	145021712	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946010_144953332_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.69	chr6	-	2464	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	2	at_least_one_novel_splicesite	FALSE	canonical	2	153	junction_10	1184.18800872159	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8571	False	NA	-22	True	AATAAA	-18	NA	145021824	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993082_145021614
ES.29748.70	chr6	-	2333	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	215	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1608.97868537778	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8700	False	NA	-22	True	AATAAA	-18	NA	145021695	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993082_145021614
ES.29748.71	chr6	-	2692	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	-142	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1225.86230874434	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8343	False	NA	-22	True	AATAAA	-18	NA	145022052	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955854_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.72	chr6	-	2442	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	136	2	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_9	1590.59768954943	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8621	False	NA	-22	True	AATAAA	-18	NA	145021774	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_145002586_145002679_145021614
ES.29748.73	chr6	-	10053	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	111	2	intron_retention	TRUE	non_canonical	0	0	junction_9	1230.39642392198	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8596	False	NA	-22	True	AATAAA	-18	NA	145021799	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144991493_144991542_144993090_145021614
ES.29748.74	chr6	-	2663	13	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	228	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1725.77540342177	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGATTTGAATCTT	8713	False	NA	-22	True	AATAAA	-18	NA	145021682	144944881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145013144_145013386_145021614
ES.29748.76	chr6	-	2561	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1777.57977817273	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCTGGATTTGAATCT	8571	False	NA	-23	True	AATAAA	-17	NA	145021824	144944882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953477_144955771_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145021614
ES.29748.8	chr6	-	7657	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	133	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1180.44491542262	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTACCGTTTGCCCAG	8618	False	NA	-13	True	AATAAA	-8	NA	145021777	144939568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144941316_144941396_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.80	chr6	-	2527	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	103	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	1567.90039108473	2656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAACTCTGGATTTGAA	8588	False	NA	-26	True	AATAAA	-14	NA	145021807	144944885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144961502_144961579_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.81	chr6	-	2272	10	NIC	ENSMUSG00000030268.18	novel	7833	11	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	1614.76857647019	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAACTCTGGATTTGAA	NA	False	NA	-26	True	AATAAA	-14	NA	144993380	144944885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144993017_144993090_144993165
ES.29748.82	chr6	-	2207	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	92	257	92	-257	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCTCTCCATGCT	8577	False	NA	NA	False	NA	NA	NA	145021818	144945140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.83	chr6	-	1927	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	171	-257	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	1266.44691076167	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCTCTCCATGCT	8656	False	NA	NA	False	NA	NA	NA	145021739	144945140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144993017_144993090_145021614
ES.29748.84	chr6	-	1958	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	-513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1229.0432091672	2644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTCTCCGTTGGTC	8571	False	NA	NA	False	NA	NA	NA	145021824	144945396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993091_145021614
ES.29748.85	chr6	-	1489	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	105	962	105	-962	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTTGCCAGTGTTCAA	8590	False	NA	NA	False	NA	NA	NA	145021805	144945845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29748.86	chr6	-	2781	2	Intergenic	novelGene_24662	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGTGGGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	145011927	145008924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_145009632_145009853
ES.29748.87	chr6	-	3742	2	Intergenic	novelGene_24663	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGTGGGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	145012889	145008924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_145009642_145009864
ES.29748.88	chr6	-	3053	2	Genic_Genomic	ENSMUSG00000030268.18	novel	2556	11	NA	NA	142	-40019	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGGTCATGATGT	8627	False	NA	NA	False	NA	NA	NA	145021768	145018617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_145019762_145019859
ES.29748.9	chr6	-	5243	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	204	-2891	204	-2432	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	2674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAACAGTTTTGAATT	8689	False	NA	NA	False	AATACA	-19	NA	145021706	144941992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ES.29749.1	chr6	-	173	1	Intergenic	novelGene_24665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATAAGATTCACATA	NA	False	NA	NA	False	NA	NA	NA	145063224	145063051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_145063100_145063200
ES.2975.1	chr10	-	288	1	Intergenic	novelGene_2315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGTTTGATATATACT	NA	False	NA	-23	True	AATAAA	-22	NA	63256723	63256435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63256400_63256700
ES.29750.1	chr6	-	3734	1	Antisense	novelGene_ENSMUSG00000030263.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACATTCCAACCCTCTT	NA	False	NA	NA	False	NA	NA	NA	145112559	145108825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_145108800_145112600
ES.29751.1	chr6	-	679	2	NNC	ENSMUSG00000043541.17	novel	2682	15	NA	NA	28812	-40	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAAGCTCATTAAAATA	466	False	NA	NA	False	AATAAA	-17	NA	145122261	145120599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145121051_145122033
ES.29751.2	chr6	-	2852	2	NNC	ENSMUSG00000043541.17	novel	4308	12	NA	NA	26569	-42	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCAGAAAGCTCATTAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	145124504	145120601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145123227_145124277
ES.29752.1	chr6	+	1543	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTAAAGGAGTCTTT	NA	False	NA	11	True	NA	NA	NA	145156857	145162262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145157127_145160909_145160998_145161076
ES.29752.10	chr6	+	608	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	42	724	-2	24	multi-exon	FALSE	canonical	3	230	junction_1	45.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTATAGCCAATTTTC	NA	False	NA	NA	False	AATATA	-31	NA	145156923	145161541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160909_145160998_145161076
ES.29752.11	chr6	+	3292	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	48	-1966	4	1566	multi-exon	FALSE	canonical	3	230	junction_1	45.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGACAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	145156929	145164231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160909_145160998_145161076
ES.29752.2	chr6	+	502	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	-24	896	-2	-91	multi-exon	TRUE	canonical	3	230	junction_1	45.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGTGAGATACATGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	145156857	145161369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160909_145160998_145161076
ES.29752.3	chr6	+	665	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	-40	711	-10	37	multi-exon	FALSE	canonical	3	42	junction_1	139.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTAAGTCTATTTC	NA	False	NA	NA	False	AATATA	-44	NA	145156871	145161554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156971_145160909_145160998_145161076
ES.29752.4	chr6	+	5302	2	NIC	ENSMUSG00000040370.14	novel	2436	3	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	321	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTCTTAAAGGAGTCT	NA	False	NA	9	True	NA	NA	NA	145156879	145162260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145160998_145161076
ES.29752.5	chr6	+	1379	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	-2	-3	-2	3	multi-exon	FALSE	canonical	3	230	junction_1	45.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGTCTTTATCAAC	NA	False	NA	17	True	NA	NA	NA	145156879	145162268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160909_145160998_145161076
ES.29752.6	chr6	+	2112	2	ISM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	-20	4	-1	-4	intron_retention	FALSE	canonical	3	14	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTTAAAGGAGTCTT	NA	False	NA	10	True	NA	NA	NA	145156880	145162261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_145156979_145160247
ES.29752.7	chr6	+	1342	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	-28	22	2	-22	multi-exon	FALSE	canonical	3	42	junction_1	139.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAACGAATAAATCTTA	NA	False	NA	-8	True	NA	NA	NA	145156883	145162243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156971_145160909_145160998_145161076
ES.29752.8	chr6	+	2958	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	-2	-1338	-2	938	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGTAACTTAGCATTG	NA	False	NA	NA	False	CATAAA	-14	NA	145156898	145163603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
ES.29752.9	chr6	+	2014	3	FSM	ENSMUSG00000040370.14	ENSMUST00000039729.5	2436	3	19	403	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	153.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTTAAAGGAGTCTTT	NA	False	NA	11	True	NA	NA	NA	145156900	145162262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145156979_145160247_145160998_145161076
ES.29753.1	chr6	+	1780	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	-870	-11	-870	11	multi-exon	FALSE	canonical	3	46	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACTTGTTTTGTTGA	NA	False	NA	17	True	NA	NA	NA	145195384	145197586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145196516_145196937
ES.29753.2	chr6	+	7292	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	-24	-6369	-24	6369	multi-exon	FALSE	canonical	3	46	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCCCCAAGGATACACT	NA	False	NA	NA	False	AAAAAG	-13	NA	145196230	145203944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145196516_145196937
ES.29754.1	chr6	-	2485	1	Antisense	novelGene_ENSMUSG00000040370.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	GGGGCT	-45	NA	145160737	145158252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_145158300_145160700
ES.29755.1	chr6	-	4849	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-7	-164	-7	164	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTCGTTTATTTATT	NA	False	NA	NA	False	GATAAA	-20	NA	145195972	145162260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.10	chr6	-	4310	3	FSM	ENSMUSG00000030265.15	ENSMUST00000203147.3	817	3	24	-3517	-13	-5	multi-exon	FALSE	canonical	0	0	junction_1	493.5	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTGTGTAATTATGTA	NA	False	NA	-13	True	AATAAA	-17	NA	145195941	145162429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145192420_145192543_145195774
ES.29755.11	chr6	-	3479	6	NNC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	392.452493940349	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTGTGTAATTATGT	NA	False	NA	-14	True	AATAAA	-16	NA	145195969	145162430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145164080_145165276_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.13	chr6	-	4633	5	NNC	ENSMUSG00000030265.15	novel	4678	5	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	421.641138884716	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAGTGTGTAATTATGT	NA	False	NA	-14	True	AATAAA	-16	NA	145195920	145162430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192549_145195774
ES.29755.15	chr6	-	4001	6	NNC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	-8	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	392.452493940349	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAAGTGTGTAATTATG	NA	False	NA	-15	True	AATAAA	-15	NA	145195936	145162431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145162729_145163369_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.17	chr6	-	2204	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-294	2768	-294	513	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCGCTTCAAGGTTGAG	NA	False	NA	0	True	AATAAA	-19	NA	145196259	145165192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.19	chr6	-	2036	6	NNC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	1	502	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	442.509841698464	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195964	145165203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145166451_145177820_145177981_145179973_145180153_145189052_145189191_145192420_145192543_145195774
ES.29755.2	chr6	-	4500	3	FSM	ENSMUSG00000030265.15	ENSMUST00000203147.3	817	3	1	-3684	1	162	multi-exon	FALSE	canonical	0	0	junction_1	493.5	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTATTCGTTTATTTA	NA	False	NA	NA	False	GATAAA	-18	NA	145195964	145162262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145192420_145192543_145195774
ES.29755.20	chr6	-	1992	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-31	-767	-6	502	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195934	145165203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.21	chr6	-	7533	1	NIC	ENSMUSG00000030265.15	novel	4678	5	NA	NA	-1453	502	mono-exon	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145172736	145165203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_145165200_145172700
ES.29755.22	chr6	-	2622	5	NNC	ENSMUSG00000030265.15	novel	4678	5	NA	NA	226	502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	421.641138884716	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195670	145165203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145194756
ES.29755.24	chr6	-	1714	4	FSM	ENSMUSG00000030265.15	ENSMUST00000156486.2	832	4	-63	-819	6	502	multi-exon	FALSE	canonical	3	11	junction_2	433.641172706959	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTCGATGTTCGCT	NA	False	NA	-11	True	AATAAA	-8	NA	145195959	145165203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145192420_145192543_145195774
ES.29755.26	chr6	-	2015	7	NNC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	-8	500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	331.028196180728	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTCGATGTTCG	NA	False	NA	-13	True	AATAAA	-6	NA	145195936	145165205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145189052_145189191_145192420_145192543_145195889
ES.29755.28	chr6	-	855	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	1	3822	1	89	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAATCTTTTTTTTTCTT	NA	False	NA	-4	True	ACTAAA	-24	NA	145195964	145166246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.29	chr6	-	2931	1	FSM	ENSMUSG00000107756.2	ENSMUST00000203605.2	2561	1	438	-808	438	808	mono-exon	FALSE	NA	NA	NA	NA	NA	580	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTGAAGAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	145186515	145183584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145183600_145186500
ES.29755.3	chr6	-	4919	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-17	-3708	8	162	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTATTCGTTTATTTA	NA	False	NA	NA	False	GATAAA	-18	NA	145195920	145162262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.4	chr6	-	5070	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	-386	-6	-386	6	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTAGTTTTAATTGT	NA	False	NA	-2	True	AATAAA	-28	NA	145196351	145162418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.5	chr6	-	6654	4	NIC	ENSMUSG00000030265.15	novel	4678	5	NA	NA	17	0	intron_retention	FALSE	canonical	3	862	junction_1	92.8307899112981	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145195948	145162424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_145166451_145177820_145180153_145192420_145192543_145195774
ES.29755.6	chr6	-	4949	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-209	-3546	-147	0	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145196112	145162424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ES.29755.7	chr6	-	4585	4	FSM	ENSMUSG00000030265.15	ENSMUST00000156486.2	832	4	-159	-3594	-90	-4	multi-exon	FALSE	canonical	3	11	junction_2	433.641172706959	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGTAATTATGTAG	NA	False	NA	-12	True	AATAAA	-18	NA	145196055	145162428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145166451_145177820_145177981_145192420_145192543_145195774
ES.29755.8	chr6	-	4805	6	NNC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	442.509841698464	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGTAATTATGTAG	NA	False	NA	-12	True	AATAAA	-18	NA	145195958	145162428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_145166451_145177820_145177981_145179973_145180153_145189052_145189191_145192420_145192543_145195774
ES.29755.9	chr6	-	4789	6	NIC	ENSMUSG00000030265.15	novel	1194	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	473.187742867458	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTGTGTAATTATGTA	NA	False	NA	-13	True	AATAAA	-17	NA	145195967	145162429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145192922_145193037_145195774
ES.29756.1	chr6	+	477	1	FSM	ENSMUSG00000067344.8	ENSMUST00000119876.2	378	1	-51	-48	-51	48	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAGTTGAAGC	840	False	NA	NA	False	AATAAA	-14	NA	145212074	145212551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145212100_145212600
ES.29757.1	chr6	-	2848	2	Intergenic	novelGene_24666	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCAAAACATTAGATTCT	2909	False	NA	NA	False	NA	NA	NA	145226529	145223325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_145226125_145226480
ES.29758.1	chr6	+	1607	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	169	-1	169	1	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTCCCTGTGTGCTG	NA	False	NA	17	True	AATAAA	-37	NA	145561651	145567206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
ES.29758.2	chr6	+	5460	1	NIC	ENSMUSG00000067338.7	novel	1775	5	NA	NA	261	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTGCTTCCCTGTGTG	NA	False	NA	14	True	AATAAA	-34	NA	145561743	145567203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145561700_145567200
ES.29758.3	chr6	+	3656	4	NIC	ENSMUSG00000067338.7	novel	1775	5	NA	NA	263	1	intron_retention	FALSE	canonical	3	1181	junction_2	49.8687165354081	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTCCCTGTGTGCTG	NA	False	NA	17	True	AATAAA	-37	NA	145561745	145567206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145564182_145564457_145564607_145564908_145565590_145566816
ES.29758.4	chr6	+	1093	4	NNC	ENSMUSG00000067338.7	novel	1775	5	NA	NA	263	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	584.152377381108	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTTGCTTCCCTGTGT	NA	False	NA	13	True	AATAAA	-33	NA	145561745	145567202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145561816_145563958_145564128_145565121_145565590_145566816
ES.29758.5	chr6	+	3038	3	ISM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	263	3	263	-3	intron_retention	FALSE	canonical	3	1251	junction_1	25.5	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTTGCTTCCCTGTGT	NA	False	NA	13	True	AATAAA	-33	NA	145561745	145567202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_145561816_145563958_145564182_145564457
ES.29759.1	chr6	+	5606	5	FSM	ENSMUSG00000030259.13	ENSMUST00000111704.8	5446	5	-157	-3	-157	3	multi-exon	FALSE	canonical	2	4	junction_4	5.44862367942584	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTGCTTGCTTTCTTA	NA	False	NA	NA	False	AATAAA	-26	NA	145692316	145766808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145692693_145754109_145754289_145760778_145761669_145762223_145762369_145762792
ES.29759.2	chr6	+	5794	6	NNC	ENSMUSG00000030259.13	novel	5446	5	NA	NA	-157	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.48074069840786	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	145692316	145766805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145692693_145696217_145696409_145754109_145754289_145760778_145761669_145762223_145762369_145762792
ES.29759.3	chr6	+	5393	4	NIC	ENSMUSG00000030259.13	novel	5446	5	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.71722460186015	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	145692347	145766805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_145692693_145760778_145761669_145762223_145762369_145762792
ES.29759.4	chr6	+	2127	6	NNC	ENSMUSG00000030259.13	novel	5446	5	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.48074069840786	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTTAAGTGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	145692480	145763302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145692693_145696217_145696409_145754109_145754289_145760778_145761669_145762223_145762369_145762792
ES.29759.5	chr6	+	5734	1	FSM	ENSMUSG00000030259.13	ENSMUST00000058538.7	1131	1	680	-5283	680	5278	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGAGACTGCGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	145766349	145772083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145766300_145772100
ES.2976.1	chr10	+	177	1	Intergenic	novelGene_2316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGAAGCTGGCACG	NA	False	NA	NA	False	NA	NA	NA	63298473	63298650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63298500_63298600
ES.29760.1	chr6	+	3056	1	Antisense	novelGene_ENSMUSG00000030256.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATGTTACAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	145804725	145807781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_145804700_145807800
ES.29761.1	chr6	-	4744	1	Genic_Genomic	ENSMUSG00000030256.12	novel	NA	NA	NA	NA	3293	977	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCCATGAGATGGAACT	NA	False	NA	NA	False	NA	NA	NA	145807735	145802991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_145803000_145807700
ES.29761.2	chr6	-	2659	1	NIC	ENSMUSG00000030256.12	novel	6133	5	NA	NA	1423	2284	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCGATGGTCTAATAATTA	NA	False	NA	-37	True	AATAAA	-16	NA	145809605	145806946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_145806900_145809600
ES.29761.3	chr6	-	3021	5	FSM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	132	2980	-74	2282	multi-exon	FALSE	canonical	1	1	junction_1	4.94974746830583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCGATGGTCTAATAAT	NA	False	NA	-39	True	AATAAA	-14	NA	145811152	145806948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_145809465_145809856_145809969_145810301_145810410_145810722_145810787_145810931
ES.29761.4	chr6	-	1910	4	NIC	ENSMUSG00000030256.12	novel	6133	5	NA	NA	17	920	intron_retention	FALSE	canonical	2	4	junction_1	4.08248290463863	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTAGTTCTCGTTCA	NA	False	NA	NA	False	GATAAA	-23	NA	145811011	145808310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_145809969_145810301_145810410_145810722_145810787_145810931
ES.29762.1	chr6	+	4458	3	FSM	ENSMUSG00000030255.14	ENSMUST00000032383.14	4431	3	-30	3	-30	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATGGTGTTGAGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	145879817	145910946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_145880098_145901320_145901408_145906855
ES.29762.2	chr6	+	4353	4	NNC	ENSMUSG00000030255.14	novel	4431	3	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATGGTGTTGAGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	145879849	145910946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145880098_145901320_145901408_145906855_145910586_145910658
ES.29762.3	chr6	+	3606	2	NNC	ENSMUSG00000030255.14	novel	4431	3	NA	NA	8113	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGACATGGTGTTGAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	145907267	145910945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_145910560_145910631
ES.29763.1	chr6	+	201	1	Intergenic	novelGene_24667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCTCATCGTATTATGA	NA	False	NA	NA	False	NA	NA	NA	146197764	146197965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146197800_146198000
ES.29764.1	chr6	+	177	1	Intergenic	novelGene_24668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAAAAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	146250408	146250585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146250400_146250600
ES.29765.1	chr6	-	2257	1	ISM	ENSMUSG00000030287.16	ENSMUST00000079573.13	11679	56	391617	6	36647	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATTCTTCTCTTGCCA	NA	False	NA	NA	False	AATAAA	-22	NA	146012059	146009802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146009800_146012100
ES.29765.2	chr6	-	5309	21	NNC	ENSMUSG00000030287.16	novel	11679	56	NA	NA	-11396	-1179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.02347447452294	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCCCGCTGAATGATAT	NA	False	NA	NA	False	ATTAAA	-22	NA	146145373	146010975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146013256_146013874_146014037_146045606_146045768_146058467_146058634_146060384_146060516_146068076_146068170_146072721_146072918_146074741_146074907_146081677_146081854_146088937_146089064_146091953_146092147_146096010_146096119_146125506_146125630_146126197_146126294_146128988_146129100_146131190_146131392_146133791_146134049_146135375_146135560_146141769_146141958_146142634_146142744_146145290
ES.29765.3	chr6	-	8942	57	FSM	ENSMUSG00000030287.16	ENSMUST00000053273.15	8331	57	-281	-330	-15	330	multi-exon	FALSE	canonical	0	0	junction_7	0.943391352990878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTAGCTGGACATTT	NA	False	NA	NA	False	ATTAAA	-39	NA	146403691	146012647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_146013256_146013874_146014037_146045606_146045768_146058467_146058634_146060384_146060516_146068076_146068170_146072721_146072918_146074741_146074907_146081677_146081854_146088937_146089064_146091953_146092147_146096010_146096119_146125506_146125630_146126197_146126294_146128988_146129100_146131190_146131392_146133791_146134049_146135375_146135560_146141769_146141958_146142634_146142744_146193022_146193132_146195510_146195654_146198046_146198238_146212484_146212606_146214336_146214466_146224608_146224735_146226488_146226741_146228591_146228793_146229792_146229916_146230970_146231097_146231205_146231296_146246554_146246729_146248565_146248732_146251520_146251579_146256127_146256258_146260791_146260986_146272750_146272902_146274591_146274737_146275861_146276114_146277289_146277476_146277560_146277681_146280842_146281016_146284181_146284344_146287372_146287515_146292282_146292444_146292808_146292909_146298410_146298563_146307255_146307301_146316818_146316915_146319100_146319248_146319429_146319514_146319915_146320015_146324203_146324363_146326999_146327087_146327952_146328069_146378184_146378256_146403284
ES.29766.1	chr6	+	2884	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479352	146500696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.10	chr6	+	1257	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	62	1447	0	420	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAAGGTTGGTGTGGT	NA	False	NA	18	True	AATAAA	-30	NA	146479418	146499249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ES.29766.12	chr6	+	3441	6	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	3	744	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	146.183993651836	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146479421	146501440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146487317_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.13	chr6	+	2696	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	69	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479425	146500695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ES.29766.14	chr6	+	5236	6	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_3	154.928886912674	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGTCTCAGGGTTAAT	NA	False	NA	27	True	AATAAA	-18	NA	146479426	146500694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146496788_146498792
ES.29766.15	chr6	+	3241	7	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.863168126493	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGTCTCAGGGTTAAT	NA	False	NA	27	True	AATAAA	-18	NA	146479426	146500694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146490703_146491251_146491391_146491535_146496673_146496788_146498792
ES.29766.16	chr6	+	7834	5	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_3	163.600695291921	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479426	146500695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146496788_146498792
ES.29766.17	chr6	+	4385	1	NIC	ENSMUSG00000040242.15	novel	2766	6	NA	NA	-9	-4993	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATGTGGATATGTGTA	NA	False	NA	NA	False	AAAAAG	-8	NA	146479428	146483813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479400_146483800
ES.29766.18	chr6	+	9356	4	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	174	junction_2	94.8027191358748	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479433	146500695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146494246_146496673_146496788_146498792
ES.29766.19	chr6	+	5101	5	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_2	159.745696342656	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGTCTGGTCTCAGG	NA	False	NA	21	True	AATAAA	-12	NA	146479437	146500688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146487317_146491391_146491535_146494131_146496788_146498792
ES.29766.2	chr6	+	3871	4	NIC	ENSMUSG00000040242.15	novel	918	5	NA	NA	26	-4	intron_retention	FALSE	canonical	0	0	junction_2	183.688746404225	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACGGTGTGCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	146479382	146494359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146490356_146491391_146491535_146494131
ES.29766.20	chr6	+	3834	6	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	174	junction_4	96.3099164157046	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTCAGGGTTAATT	NA	False	NA	28	True	AATAAA	-19	NA	146479437	146500695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146487317_146490237_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.21	chr6	+	2741	8	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	0	4056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.329559366636	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGAAAAGGGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	146479437	146504752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792_146499019_146503132
ES.29766.22	chr6	+	5697	6	NIC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	19	-2	intron_retention	FALSE	canonical	0	0	junction_2	146.183993651836	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGTCTCAGGGTTAAT	NA	False	NA	27	True	AATAAA	-18	NA	146479458	146500694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.23	chr6	+	3830	7	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	249	2968	intron_retention	FALSE	canonical	0	0	junction_3	176.025250713893	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGAGTAAATACA	NA	False	NA	NA	False	AATAAA	-6	NA	146479688	146503664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146496788_146498792_146499019_146503132
ES.29766.24	chr6	+	6359	1	Genic_Genomic	ENSMUSG00000040242.15	novel	NA	NA	NA	NA	5294	775	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGAAATCATTGTCAGG	NA	False	NA	NA	False	AAAACA	-4	NA	146495112	146501471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_146495100_146501500
ES.29766.25	chr6	+	3151	2	ISM	ENSMUSG00000040242.15	ENSMUST00000160697.2	600	6	6467	-2612	6467	745	3prime_fragment	FALSE	canonical	3	226	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	146496285	146501441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_146496788_146498792
ES.29766.3	chr6	+	1404	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	29	1447	29	420	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAAGGTTGGTGTGGT	NA	False	NA	18	True	AATAAA	-30	NA	146479385	146499249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.4	chr6	+	947	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	-33	4	29	-4	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACGGTGTGCTTTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	146479385	146494359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ES.29766.5	chr6	+	2241	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	32	493	-30	-493	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCTTTCATTCTGAAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	146479388	146500203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ES.29766.6	chr6	+	1373	7	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	-30	404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.025250713893	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATCACAATTTTAAAA	NA	False	NA	2	True	AATAAA	-14	NA	146479388	146499233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494234_146496673_146496788_146498792
ES.29766.7	chr6	+	1743	8	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	-24	4056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.133594168573	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGAAAAGGGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	146479394	146504752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792_146499019_146504173
ES.29766.8	chr6	+	3372	8	NNC	ENSMUSG00000040242.15	novel	2880	7	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.329559366636	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGTCTCAGGGTTAA	NA	False	NA	26	True	AATAAA	-17	NA	146479408	146500693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146479707_146487179_146487317_146490237_146490356_146490703_146491251_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ES.29766.9	chr6	+	5573	5	NIC	ENSMUSG00000040242.15	novel	2766	6	NA	NA	-9	-61	intron_retention	FALSE	canonical	0	0	junction_2	153.052891184714	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAGAGTGTGCTGAAG	NA	False	NA	-32	True	AATAAA	-15	NA	146479409	146500635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146479707_146487179_146490356_146491391_146491535_146496673_146496788_146498792
ES.29767.1	chr6	-	3074	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	-14	-1	-14	1	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGGAGTGTTACTTTAGA	NA	False	NA	-1	True	AATAAA	-27	NA	146479347	146451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.10	chr6	-	2463	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	376	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	64.3019913669087	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146478902	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468109_146476199_146476275_146477722_146477959_146478798
ES.29767.11	chr6	-	2741	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	80.6204826469193	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479277	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.13	chr6	-	2965	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	63.7823141141022	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479248	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478727
ES.29767.14	chr6	-	4929	14	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	16	-2	intron_retention	FALSE	canonical	3	203	junction_12	22.9150734608462	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479317	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.15	chr6	-	3007	18	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.6433608279344	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479277	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452130_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.16	chr6	-	2897	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	80.3296917397297	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479277	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468214_146476199_146476275_146477722_146477959_146478798
ES.29767.18	chr6	-	3003	18	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	90.0712904883805	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479266	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459122_146461623_146461709_146463226_146463356_146464924_146465028_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.19	chr6	-	2887	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	57.4303586420109	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479287	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.2	chr6	-	3592	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	31	junction_5	58.7136175762394	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479337	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.20	chr6	-	2848	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	63.7024332345319	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479277	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
ES.29767.21	chr6	-	3567	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	9	-3	intron_retention	FALSE	canonical	3	203	junction_14	23.0327303346057	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	False	NA	-5	True	AATAAA	-23	NA	146479269	146451132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.22	chr6	-	2808	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	78.456098392668	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	False	NA	-5	True	AATAAA	-23	NA	146479256	146451132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.23	chr6	-	3005	18	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	77.2172148545659	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	False	NA	-5	True	AATAAA	-23	NA	146479290	146451132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478806
ES.29767.24	chr6	-	3661	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	372	-3	intron_retention	FALSE	canonical	3	82	junction_2	58.3499343937078	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	False	NA	-5	True	AATAAA	-23	NA	146478906	146451132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.25	chr6	-	4672	15	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	203	junction_13	22.7821313797476	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATCGGAGTGTTACT	NA	False	NA	-6	True	AATAAA	-22	NA	146479343	146451133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.26	chr6	-	2946	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	61.8109201011439	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATCGGAGTGTTACT	NA	False	NA	-6	True	AATAAA	-22	NA	146479290	146451133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465028_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.29	chr6	-	2537	18	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	332	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	88.9580205027332	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTATCGGAGTGTTACT	NA	False	NA	-6	True	AATAAA	-22	NA	146478946	146451133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468109_146476199_146476275_146477722_146477959_146478798
ES.29767.3	chr6	-	3007	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479359	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.30	chr6	-	4807	15	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	335	3	intron_retention	FALSE	canonical	3	203	junction_13	23.6316330716405	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146478943	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.31	chr6	-	2951	18	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	73.2670141559065	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146479277	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.32	chr6	-	2811	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-12	3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	81.1331963844366	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146479290	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
ES.29767.33	chr6	-	2924	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_15	78.5898918039082	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146479279	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
ES.29767.34	chr6	-	6643	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	376	3	intron_retention	FALSE	canonical	3	82	junction_2	59.8585740632776	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146478902	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.35	chr6	-	7773	13	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-2	3	intron_retention	FALSE	canonical	3	203	junction_11	20.4183672761125	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGTATCGGAGTGTTA	NA	False	NA	-8	True	AATAAA	-20	NA	146479280	146451135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146454010_146455481_146455713_146455989_146456145_146456425_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.36	chr6	-	2791	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	95.4670391054188	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAAGTATCGGAGTGT	NA	False	NA	-10	True	AATAAA	-18	NA	146479319	146451137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
ES.29767.37	chr6	-	5123	15	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-2	0	intron_retention	FALSE	canonical	3	31	junction_4	58.5158272676404	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146479280	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.39	chr6	-	4102	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	338	0	intron_retention	FALSE	canonical	3	31	junction_6	59.3067356114707	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146478940	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.4	chr6	-	2765	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	63.6468031840999	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479288	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.40	chr6	-	4921	14	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_11	89.3716394659313	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146479288	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146454010_146455481_146455713_146455989_146456145_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468109_146476199_146476275_146477722_146477959_146478798
ES.29767.41	chr6	-	4295	15	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-10	0	intron_retention	FALSE	canonical	3	201	junction_1	25.5319927358055	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146479343	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.43	chr6	-	2724	18	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	77.0552760746093	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146478932	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478723
ES.29767.44	chr6	-	2588	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	335	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9037056339458	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146478943	146451138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146452130_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.45	chr6	-	5006	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	12	-2	intron_retention	FALSE	canonical	3	31	junction_5	66.7687218854923	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCAAGTATCGGAG	NA	False	NA	-13	True	AATAAA	-15	NA	146479266	146451140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.46	chr6	-	5115	17	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	333	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	89.9694175470198	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCAAGTATCGGAG	NA	False	NA	-13	True	AATAAA	-15	NA	146478945	146451140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146461709_146463226_146463356_146464924_146465014_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.47	chr6	-	2427	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	335	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	78.6518237232933	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCAAGTATCGGAG	NA	False	NA	-13	True	AATAAA	-15	NA	146478943	146451140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.5	chr6	-	4022	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	201	junction_1	25.0812014597919	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479342	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.52	chr6	-	5855	15	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	239	-4	intron_retention	FALSE	canonical	3	88	junction_1	44.8963091069697	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAATGCCAAGTATCGG	NA	False	NA	-15	True	AATAAA	-13	NA	146479039	146451142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146454010_146455481_146455713_146455989_146456145_146456425_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.54	chr6	-	2482	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	334	-101	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACACAGTTTATTTTAT	NA	False	NA	-112	True	AATATA	-24	NA	146478944	146451239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.55	chr6	-	2518	16	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	390	726	335	-264	5prime_fragment	FALSE	canonical	3	203	junction_14	23.0327303346057	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGGTTGTTTTAAGAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	146478943	146451855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.56	chr6	-	2323	15	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	367	2541	312	315	5prime_fragment	FALSE	canonical	3	203	junction_13	20.0551535440013	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATACTTTATAT	NA	False	NA	NA	False	AATAAA	-8	NA	146478966	146453670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.57	chr6	-	1381	6	ISM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	85	13550	30	0	5prime_fragment	FALSE	canonical	3	203	junction_4	21.786234185834	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTTTTATTCTTACC	NA	False	NA	NA	False	AATAAA	-16	NA	146479248	146464679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.6	chr6	-	4946	16	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	90.8250087928552	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479277	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146451484_146451584_146451663_146452132_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.7	chr6	-	5119	15	NNC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_10	81.885341689911	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479277	146451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465006_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.8	chr6	-	2789	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.8907400697994	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479279	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29767.9	chr6	-	3520	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	11	-2	intron_retention	FALSE	canonical	3	88	junction_1	44.5659185224539	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	False	NA	-4	True	AATAAA	-24	NA	146479322	146451131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146451484_146451584_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ES.29768.1	chr6	-	3724	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	-403	-80	-403	80	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTGTTTTAAGAACTT	NA	False	NA	NA	False	TATAAA	-15	NA	146536498	146503769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.10	chr6	-	5171	11	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	6204	1	6105	-1	3prime_fragment	FALSE	canonical	3	689	junction_8	117.51684985567	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146529891	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593
ES.29768.11	chr6	-	5617	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	39	-1	intron_retention	FALSE	canonical	3	689	junction_6	120.995051424163	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536056	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.13	chr6	-	2964	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	288.028470814953	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535982	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.14	chr6	-	3099	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	274.992321455535	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535981	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514954_146520049_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.15	chr6	-	2919	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	49	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	281.457230924178	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536046	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146527593_146527749_146535883
ES.29768.16	chr6	-	3271	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	276.078650908764	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536073	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520263_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.17	chr6	-	8192	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	18	-1	intron_retention	FALSE	canonical	3	689	junction_7	104.628103299257	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535978	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.18	chr6	-	2972	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_9	267.7240370232	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535978	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146527593_146527749_146535883
ES.29768.2	chr6	-	3095	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	261.657810732558	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535964	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525199_146527593_146527749_146535883
ES.29768.20	chr6	-	5926	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	689	junction_7	124.509506801491	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536085	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146521510_146523372_146525213_146527593_146527749_146535883
ES.29768.21	chr6	-	3047	11	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	350.874464730621	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146536009	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521561_146523372_146523494_146527593_146527749_146535883
ES.29768.23	chr6	-	3105	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	274.759759826352	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146535974	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507632_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.24	chr6	-	3359	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	97	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	272.826709145458	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146535899	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535561
ES.29768.25	chr6	-	3153	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-24	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	276.818614718276	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146536020	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507780_146509072_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.26	chr6	-	3158	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	274.759759826352	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146535984	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505556_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.27	chr6	-	3228	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	274.29793176745	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146535956	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521644_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.28	chr6	-	3153	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	294	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	353.525432472628	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146535702	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521561_146523372_146523494_146525061_146525213_146527593_146527749_146535621
ES.29768.3	chr6	-	3137	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	272.250249489523	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535974	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509193_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.30	chr6	-	3335	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-48	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	272.826709145458	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146536044	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535730
ES.29768.33	chr6	-	772	2	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	31121	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTAATGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	146504875	146503857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146503928_146504173
ES.29768.34	chr6	-	2773	11	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	10825	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	268.487541610407	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATGCTTAATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	146525171	146503859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146504574_146504623_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061
ES.29768.35	chr6	-	4685	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	15	-10	intron_retention	FALSE	canonical	3	689	junction_8	118.156506380309	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATGCTTAATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	146535981	146503859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146525213_146527593_146527749_146535883
ES.29768.36	chr6	-	3182	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	26	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	273.313460945275	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATGCTTAATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	146536069	146503859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523498_146525088_146525213_146527593_146527749_146535883
ES.29768.37	chr6	-	3007	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	37	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	274.759759826352	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATGCTTAATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	146535959	146503859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505432_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.38	chr6	-	3167	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-41	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	262.194962474696	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATGCTTAATGTC	NA	False	NA	NA	False	AATAAA	-10	NA	146536037	146503859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527599_146527749_146535883
ES.29768.39	chr6	-	2102	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-43	-1130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	359.506250017511	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGTTCTTGTAGCT	NA	False	NA	0	True	AATAAA	-20	NA	146536039	146504979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514959_146520031_146520210_146521337_146521561_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.4	chr6	-	3150	13	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	265.275786787177	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536047	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146504381_146504422_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.40	chr6	-	2650	13	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-619	-1130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	265.275786787177	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGTTCTTGTAGCT	NA	False	NA	0	True	AATAAA	-20	NA	146536714	146504979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883_146536582_146536661
ES.29768.41	chr6	-	1912	10	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	86	-1130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	413.99206767614	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGTTCTTGTAGCT	NA	False	NA	0	True	AATAAA	-20	NA	146535910	146504979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514959_146520031_146520210_146521337_146521510_146527593_146527749_146535621
ES.29768.42	chr6	-	2808	9	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	7062	-1135	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	290.066263981181	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTAGTGTTTTGTTCTTG	NA	False	NA	-5	True	AATAAA	-15	NA	146528934	146504984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146527593
ES.29768.43	chr6	-	5380	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	21	-1135	intron_retention	FALSE	canonical	3	689	junction_6	120.592467467403	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTAGTGTTTTGTTCTTG	NA	False	NA	-5	True	AATAAA	-15	NA	146535975	146504984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.44	chr6	-	2830	6	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	19418	1137	19319	-1137	3prime_fragment	FALSE	canonical	3	763	junction_2	66.7934128488731	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTAGTGTTTTGTTCT	NA	False	NA	-7	True	AATAAA	-13	NA	146516677	146504986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875
ES.29768.45	chr6	-	1810	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	22	-1137	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	281.457230924178	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTAGTGTTTTGTTCT	NA	False	NA	-7	True	AATAAA	-13	NA	146536073	146504986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146527593_146527749_146535883
ES.29768.46	chr6	-	1657	9	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	12566	-1137	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	290.702597167621	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTAGTGTTTTGTTCT	NA	False	NA	-7	True	AATAAA	-13	NA	146523430	146504986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521644_146523372
ES.29768.47	chr6	-	4081	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	28	-1139	intron_retention	FALSE	canonical	3	689	junction_7	119.765646159489	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCCTAGTGTTTTGTT	NA	False	NA	-9	True	AATAAA	-11	NA	146535968	146504988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.48	chr6	-	2017	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	22	-1139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	274.759759826352	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCCTAGTGTTTTGTT	NA	False	NA	-9	True	AATAAA	-11	NA	146535974	146504988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505556_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.5	chr6	-	3242	12	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	273.225877554249	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536046	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521561_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.6	chr6	-	3216	3	ISM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	25635	1	25536	-1	3prime_fragment	FALSE	canonical	3	763	junction_2	75.5	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	5447	False	NA	NA	False	AATAAA	-19	NA	146510460	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_146505520_146507625_146507789_146509076
ES.29768.7	chr6	-	8279	11	NNC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	1	6	junction_7	283.864210495089	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146536014	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146520210_146521337_146521561_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.8	chr6	-	5207	11	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	40	-1	intron_retention	FALSE	canonical	3	689	junction_7	119.765646159489	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535956	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ES.29768.9	chr6	-	4142	9	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	15	-1	intron_retention	FALSE	canonical	2	4	junction_7	298.528657543962	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAATGTCCTCCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	146535981	146503850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_146505520_146507625_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146527593_146527749_146535883
ES.29769.1	chr6	+	171	1	Intergenic	novelGene_24669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTCATTCTTTTC	NA	False	NA	NA	False	AATAAA	-8	NA	146541789	146541960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146541800_146542000
ES.2977.1	chr10	-	176	1	Intergenic	novelGene_2317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACGAGAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	63303151	63302975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_63303000_63303200
ES.29770.1	chr6	+	786	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	27	1	-5	-1	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	False	NA	35	True	AATAAA	-20	NA	146544071	146552099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ES.29770.2	chr6	+	770	4	NNC	ENSMUSG00000030291.13	novel	689	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.342186025662	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGTTTTTGTTTGTC	NA	False	NA	33	True	AATAAA	-18	NA	146544078	146552097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146544151_146549669_146549778_146550647_146550749_146551608
ES.29770.3	chr6	+	642	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	42	130	-2	-130	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGACTCATCTTCAAACA	NA	False	NA	-94	True	AGTAAA	-16	NA	146544086	146551970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ES.29770.4	chr6	+	6263	3	FSM	ENSMUSG00000030291.13	ENSMUST00000075077.3	1713	3	-4570	20	-1	-20	multi-exon	FALSE	canonical	3	254	junction_2	43	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGTTGTTTTGTGTA	NA	False	NA	16	True	AATAAA	-1	NA	146544087	146552080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146549778_146550647_146550749_146551608
ES.29770.6	chr6	+	631	3	FSM	ENSMUSG00000030291.13	ENSMUST00000125539.8	699	3	67	1	23	-1	multi-exon	FALSE	canonical	1	5	junction_1	124.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	False	NA	35	True	AATAAA	-20	NA	146544111	146552099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146544151_146550647_146550749_146551608
ES.29770.7	chr6	+	826	4	NNC	ENSMUSG00000030291.13	novel	1713	3	NA	NA	291	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.342186025662	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	False	NA	35	True	AATAAA	-20	NA	146544379	146552099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146544499_146549662_146549778_146550647_146550749_146551608
ES.29771.1	chr6	-	683	1	FSM	ENSMUSG00000084291.4	ENSMUST00000118950.2	348	1	-271	-64	-271	64	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-17	NA	146549357	146548674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_146548700_146549400
ES.29772.1	chr6	+	176	1	Intergenic	novelGene_24670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	146563608	146563784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146563600_146563800
ES.29773.1	chr6	-	2155	1	Intergenic	novelGene_24671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146590900	146588745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_146588700_146590900
ES.29774.1	chr6	-	2374	2	Intergenic	novelGene_24672	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACTCTCCAGTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	146621156	146606233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_146608564_146621112
ES.29774.2	chr6	-	1729	4	Intergenic	novelGene_24673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.44948974278318	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCCAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	146621171	146606251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_146606692_146606733_146607900_146608499_146608564_146621112
ES.29775.1	chr6	+	4029	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-181	-756	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTAAGTCTGGAGATGT	NA	False	NA	NA	False	ATTAAA	-25	NA	146626311	146679554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.10	chr6	+	4383	12	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	45.7221215244242	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGGGTGTTTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	146626461	146680309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.11	chr6	+	2375	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626462	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.12	chr6	+	4405	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-30	175	-30	-175	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGTTTTTGGGGGGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	146626462	146680135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.13	chr6	+	3104	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-27	-7	intron_retention	FALSE	canonical	3	136	junction_9	11.0478756127844	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAACTTCTGATCAGTC	NA	False	NA	4	True	ATTAAA	-14	NA	146626465	146678047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.14	chr6	+	2266	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-27	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.8356817580171	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626465	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146659958_146660104_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.15	chr6	+	4743	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	136	junction_9	10.5155308419922	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626465	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.16	chr6	+	1735	6	ISM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	-62	7881	-21	-7881	intron_retention	FALSE	canonical	3	154	junction_2	6.34350061086148	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAACCTCAAACA	NA	False	NA	NA	False	TTTAAA	-23	NA	146626471	146670173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916
ES.29775.18	chr6	+	4622	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGGGTGTTTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	146626473	146680309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.2	chr6	+	4728	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-179	1	-179	-1	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGGGTGTTTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	146626313	146680309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.20	chr6	+	4575	14	FSM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	-46	-2255	-5	-1	multi-exon	FALSE	canonical	1	2	junction_13	43.6006622825765	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGGGTGTTTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	146626487	146680309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
ES.29775.21	chr6	+	4616	15	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.134873013951	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTGGGGTGTTTGT	NA	False	NA	12	True	AATAAA	-17	NA	146626488	146680307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659964_146660104_146661618_146661671_146663228_146663300_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.22	chr6	+	4588	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.0706801861624	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGTGGGGTGTTTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	146626489	146680309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661707_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.23	chr6	+	6972	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	136	junction_9	10.5155308419922	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTGGTGGGGTGTTT	NA	False	NA	10	True	AATAAA	-15	NA	146626490	146680305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.24	chr6	+	6733	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-1	-243	intron_retention	FALSE	canonical	3	136	junction_9	10.5155308419922	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGAAATATTTTAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	146626491	146680067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.25	chr6	+	4758	13	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_7	57.7578758458292	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626508	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669990_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.26	chr6	+	3785	14	FSM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	-25	-1486	16	-770	multi-exon	FALSE	canonical	1	2	junction_13	43.6006622825765	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGTTGTTCACAGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	146626508	146679540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
ES.29775.28	chr6	+	4597	15	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.1730198873561	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTGGTGGGGTGTTT	NA	False	NA	10	True	AATAAA	-15	NA	146626523	146680305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146628470_146628554_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.29	chr6	+	2700	14	NNC	ENSMUSG00000001630.14	novel	411	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	42.9714367772155	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626547	146678054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146627007_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.3	chr6	+	3844	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-58	764	-58	-764	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTCACAGCTAAGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	146626434	146679546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.30	chr6	+	2262	13	ISM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	33422	3	33146	-3	3prime_fragment	FALSE	canonical	1	2	junction_12	44.9626388114498	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	2729	False	NA	8	True	ATTAAA	-18	NA	146659955	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
ES.29775.31	chr6	+	4319	13	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	33146	-239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.9806002038613	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATTTTAGATTTTTA	2729	False	NA	NA	False	AATAAA	-22	NA	146659955	146680071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669990_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.32	chr6	+	4492	13	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	33463	8	33146	-8	3prime_fragment	FALSE	canonical	3	136	junction_9	10.8816231428139	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	2729	False	NA	7	True	AATAAA	-12	NA	146659955	146680302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.33	chr6	+	6347	3	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	44997	-8	intron_retention	FALSE	canonical	0	0	junction_2	68	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	NA	False	NA	7	True	AATAAA	-12	NA	146671806	146680302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146673198_146673595_146675116_146676866
ES.29775.34	chr6	+	1994	2	NNC	ENSMUSG00000001630.14	novel	2274	14	NA	NA	47497	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146674306	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146675116_146676866
ES.29775.35	chr6	+	3307	2	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	50404	5	50087	-5	3prime_fragment	FALSE	canonical	3	153	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTGGTGGGGTGTTT	NA	False	NA	10	True	AATAAA	-15	NA	146676896	146680305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_146676990_146677091
ES.29775.4	chr6	+	4304	15	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-58	-243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	66.2221447023546	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGAAATATTTTAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	146626434	146680067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661707_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669990_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091_146678146_146678246
ES.29775.7	chr6	+	4412	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	-47	-239	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATTTTAGATTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	146626445	146680071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29775.8	chr6	+	2333	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	-42	2259	-42	-3	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTGATCAGTCAATG	NA	False	NA	8	True	ATTAAA	-18	NA	146626450	146678051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ES.29776.1	chr6	-	4249	1	Antisense	novelGene_ENSMUSG00000001630.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCAATTCCCATAGCC	NA	False	NA	NA	False	AATAAA	-35	NA	146681626	146677377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_146677400_146681600
ES.29777.1	chr6	-	208	1	Intergenic	novelGene_24674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTAATCTCAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	146719220	146719012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_146719000_146719200
ES.29778.1	chr6	+	3073	2	NIC	ENSMUSG00000040187.16	novel	1664	15	NA	NA	1755	4297	intron_retention	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGGACCATTCTATGA	849	False	NA	NA	False	AGTAAA	-15	NA	146725865	146729712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146728823_146729596
ES.29779.1	chr6	+	444	1	FSM	ENSMUSG00000040187.16	ENSMUST00000204578.2	2999	1	2562	-7	2562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTGCCTTTCTGAA	9567	False	NA	NA	False	TTTAAA	-5	NA	146734583	146735027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146734600_146735000
ES.2978.1	chr10	+	153	1	Intergenic	novelGene_2318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63309069	63309222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63309100_63309200
ES.29780.1	chr6	+	183	1	Intergenic	novelGene_24675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAATAAAAGAAGGATT	NA	False	NA	NA	False	NA	NA	NA	146750145	146750328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146750100_146750300
ES.29781.1	chr6	+	4890	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	-33	-6	-33	6	multi-exon	TRUE	canonical	1	79	junction_5	45.7139938177494	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCATTGTTTCTTTG	7506	False	NA	19	True	AATAAA	-23	NA	146789951	146933529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.11	chr6	+	4910	29	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_17	94.4919551699336	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7541	False	NA	11	True	AATAAA	-15	NA	146789986	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146918358_146918392_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.12	chr6	+	4850	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	68.0497555526045	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCATTGTTTCTT	7542	False	NA	17	True	AATAAA	-21	NA	146789987	146933527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928989_146931054_146931236_146931580_146931647_146931811
ES.29781.14	chr6	+	5036	29	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	1	35	junction_16	87.8358278441162	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCATTGTTT	7546	False	NA	14	True	AATAAA	-18	NA	146789991	146933524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.16	chr6	+	4788	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	67.7831558207329	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTATTTGTCATTGT	7546	False	NA	12	True	AATAAA	-16	NA	146789991	146933522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923923_146927041_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.17	chr6	+	4877	28	FSM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	-95	0	7	0	multi-exon	FALSE	canonical	1	5	junction_9	81.0878370126214	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7546	False	NA	13	True	AATAAA	-17	NA	146789991	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.18	chr6	+	4850	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	7	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	58.6924715190777	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCATTGTTTCTT	7546	False	NA	17	True	AATAAA	-21	NA	146789991	146933527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892106_146893904_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.2	chr6	+	5041	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-27	2	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTGTCATTGTTTC	7512	False	NA	15	True	AATAAA	-19	NA	146789957	146933525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.22	chr6	+	4729	26	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	59.7297379870362	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7547	False	NA	13	True	AATAAA	-17	NA	146789992	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.23	chr6	+	4874	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.1558138272904	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCATTGTTT	7549	False	NA	14	True	AATAAA	-18	NA	146789994	146933524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892106_146893904_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.24	chr6	+	4795	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.4078757270095	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7553	False	NA	11	True	AATAAA	-15	NA	146789998	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879611_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.25	chr6	+	7052	27	FSM	ENSMUSG00000016487.16_ENSMUSG00000040121.6	ENSMUST00000016631.14	4851	27	19	-2220	-3	0	multi-exon	FALSE	canonical	1	79	junction_5	45.7139938177494	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTATTTGTTGCTA	7558	False	NA	NA	False	NA	NA	NA	146790003	146935743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.26	chr6	+	4742	26	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	58.797333272862	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7561	False	NA	13	True	AATAAA	-17	NA	146790006	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.27	chr6	+	4818	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	68.3387944611431	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7562	False	NA	13	True	AATAAA	-17	NA	146790007	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897971_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.28	chr6	+	5015	29	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	5	junction_10	93.6647571645487	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCCTTGTGTATTTGT	7562	False	NA	6	True	AATAAA	-10	NA	146790007	146933516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.29	chr6	+	5352	26	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	2	8	intron_retention	FALSE	canonical	1	79	junction_5	45.5354631029487	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTGTTTCTTTGTT	7563	False	NA	21	True	AATAAA	-25	NA	146790008	146933531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.3	chr6	+	4908	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_16	80.1745181511443	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7515	False	NA	13	True	AATAAA	-17	NA	146789960	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146918358_146918392_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.30	chr6	+	5159	29	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	93.5404256163601	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGTGTATTTGTCAT	7563	False	NA	9	True	AATAAA	-13	NA	146790008	146933519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146819245_146819407_146840403_146840488_146840744_146840920_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.31	chr6	+	4877	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	84.6078989849336	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCATTGTTT	7564	False	NA	14	True	AATAAA	-18	NA	146790009	146933524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922839_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.32	chr6	+	4943	29	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	91.95009599267	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7565	False	NA	13	True	AATAAA	-17	NA	146790010	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146819245_146819334_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.33	chr6	+	5046	29	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.823060560649	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGTGTATTTGTCAT	7566	False	NA	9	True	AATAAA	-13	NA	146790011	146933519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146792965_146793017_146840403_146840488_146840744_146840920_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.36	chr6	+	3265	15	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	87.8626014564438	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7568	False	NA	13	True	AATAAA	-17	NA	146790013	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903730_146928882_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.37	chr6	+	5231	31	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.458530313798	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7571	False	NA	11	True	AATAAA	-15	NA	146790016	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146819245_146819407_146840403_146840488_146859668_146859763_146864811_146865018_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928882_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.38	chr6	+	7069	28	Fusion	ENSMUSG00000016487.16_ENSMUSG00000040121.6	novel	4782	28	NA	NA	10	0	multi-exon	FALSE	canonical	1	35	junction_15	73.2858432087318	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTATTTGTTGCTA	7571	False	NA	NA	False	NA	NA	NA	146790016	146935743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.39	chr6	+	5040	30	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_18	103.433642643194	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7572	False	NA	11	True	AATAAA	-15	NA	146790017	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146918358_146918392_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.40	chr6	+	2820	9	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	11	-2992	intron_retention	TRUE	non_canonical	0	0	junction_8	105.035410695632	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAAAATCT	7572	False	NA	NA	False	AATATA	-45	NA	146790017	146900755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894936_146897887_146897981_146899664_146900091_146900130
ES.29781.41	chr6	+	4839	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4181622428532	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7572	False	NA	11	True	AATAAA	-15	NA	146790017	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790175_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.42	chr6	+	4881	29	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.508217503418	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7572	False	NA	11	True	AATAAA	-15	NA	146790017	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892106_146893904_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.45	chr6	+	4680	26	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	13	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	68.5932241551598	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTGCCTTGTGTATT	7574	False	NA	3	True	AATAAA	-7	NA	146790019	146933513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.47	chr6	+	4749	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	67.067866862098	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGTATTTGTCATT	7575	False	NA	10	True	AATAAA	-14	NA	146790020	146933520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811_146933391_146933453
ES.29781.48	chr6	+	2700	9	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.0435285430518	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTATTTGTCATTGT	7578	False	NA	12	True	AATAAA	-16	NA	146790023	146933522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146928882_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.5	chr6	+	4785	26	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	67.3789284568996	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTTGTCATTGTTT	7522	False	NA	14	True	AATAAA	-18	NA	146789967	146933524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.53	chr6	+	6157	27	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	22	0	intron_retention	FALSE	canonical	1	49	junction_2	71.6267445340383	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7583	False	NA	11	True	AATAAA	-15	NA	146790028	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.54	chr6	+	4791	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.8086522031626	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTATTTGTCATTGT	7583	False	NA	12	True	AATAAA	-16	NA	146790028	146933522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897902_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.56	chr6	+	4845	28	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.4581279664404	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGTGTATTTGTCAT	7587	False	NA	9	True	AATAAA	-13	NA	146790032	146933519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146792970_146793017_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.57	chr6	+	4881	29	NNC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.7327474199473	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	7588	False	NA	11	True	AATAAA	-15	NA	146790033	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146792965_146793017_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.58	chr6	+	4714	28	NIC	ENSMUSG00000016487.16	novel	5118	18	NA	NA	29295	2	combination_of_known_junctions	FALSE	canonical	1	9	junction_16	87.7552401133547	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTGTCATTGTTTC	NA	False	NA	15	True	AATAAA	-19	NA	146819381	146933525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146918358_146918392_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.6	chr6	+	4896	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	1	35	junction_15	73.2858432087318	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCATTGTTTCTT	7528	False	NA	17	True	AATAAA	-21	NA	146789973	146933527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.60	chr6	+	4375	26	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	1707	-11	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	98.4470944213185	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATAATTGCCTTGTGT	NA	False	NA	0	True	AATAAA	-4	NA	146879687	146933510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.61	chr6	+	3937	18	FSM	ENSMUSG00000016487.16	ENSMUST00000123902.8	5118	18	1181	0	411	0	multi-exon	FALSE	canonical	3	236	junction_6	21.7782152032587	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	NA	False	NA	11	True	AATAAA	-15	NA	146902223	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.62	chr6	+	7229	9	NIC	ENSMUSG00000016487.16	novel	5118	18	NA	NA	5490	0	intron_retention	FALSE	canonical	3	244	junction_1	17.4781113110084	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTATTTGTCATTG	NA	False	NA	11	True	AATAAA	-15	NA	146917866	146933521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.63	chr6	+	3552	1	FSM	ENSMUSG00000040121.6	ENSMUST00000036194.6	1662	1	-2630	740	-2630	-740	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGCTGTGTCTTGG	NA	False	NA	NA	False	AAGAAA	-13	NA	146931451	146935003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146931500_146935000
ES.29781.7	chr6	+	4667	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	-7	191	-7	-189	multi-exon	FALSE	canonical	1	79	junction_5	45.7139938177494	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTTATTAGAACCTGG	7532	False	NA	NA	False	AATAAA	-20	NA	146789977	146933332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.8	chr6	+	4780	27	NNC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	68.2977405259262	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7533	False	NA	13	True	AATAAA	-17	NA	146789978	146933523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928882_146928995_146931058_146931236_146931580_146931647_146931811
ES.29781.9	chr6	+	4687	28	NIC	ENSMUSG00000016487.16	novel	4782	28	NA	NA	-1	-193	combination_of_known_junctions	FALSE	canonical	1	35	junction_15	73.2858432087318	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTTTGTTATTAGAAC	7538	False	NA	NA	False	AATAAA	-16	NA	146789983	146933328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ES.29782.1	chr6	+	206	1	Intergenic	novelGene_24676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTAAACATTAAGAAAAT	5498	False	NA	NA	False	NA	NA	NA	146938949	146939155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146938900_146939200
ES.29783.1	chr6	+	1106	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	-14	3070	-14	22	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGCGGCTTTCAGAC	NA	False	NA	34	True	TATAAA	-36	NA	146944247	146972419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ES.29783.11	chr6	+	7214	6	NIC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	22	6174	intron_retention	FALSE	canonical	3	690	junction_4	31.359846938402	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACAGTGTCCACTCGT	NA	False	NA	NA	False	AGTAAA	-32	NA	146944283	146963539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146957490_146961639_146961750_146962920
ES.29783.2	chr6	+	922	7	NIC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	269.856391849855	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTATTGTCTTACGTCA	NA	False	NA	12	True	TATAAA	-14	NA	146944269	146972397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146961639_146961750_146962920_146962991_146972051
ES.29783.3	chr6	+	1072	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	237.425391073766	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTATTGTCTTACGTCA	NA	False	NA	12	True	TATAAA	-14	NA	146944269	146972397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146944409_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ES.29783.4	chr6	+	6301	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	250.046689517729	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTACGTCAGGTGA	NA	False	NA	17	True	TATAAA	-19	NA	146944269	146972402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146968225_146972051
ES.29783.6	chr6	+	4108	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	9	-55	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	237.425391073766	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTGAATCATGAGCA	NA	False	NA	NA	False	AAGAAA	-22	NA	146944270	146975434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146944409_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ES.29783.7	chr6	+	4598	2	FSM	ENSMUSG00000040112.10	ENSMUST00000149660.2	4607	2	9	0	9	0	multi-exon	FALSE	canonical	3	752	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	146944270	146952078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146944399_146947608
ES.29783.8	chr6	+	3178	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	9	-2	intron_retention	FALSE	canonical	2	2	junction_6	312.021715623141	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGACTATTGTCTTACGT	NA	False	NA	10	True	TATAAA	-12	NA	146944270	146972395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146944399_146947608_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146968435_146968570_146972051
ES.29783.9	chr6	+	2799	8	NIC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	244.982714925451	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTATTGTCTTACGTCA	NA	False	NA	12	True	TATAAA	-14	NA	146944274	146972397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_146946141_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ES.29784.1	chr6	+	179	1	Intergenic	novelGene_24677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGATGCTCCAACCA	NA	False	NA	NA	False	NA	NA	NA	146984520	146984699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_146984500_146984700
ES.29785.1	chr6	-	2464	2	NNC	ENSMUSG00000072662.3	novel	1125	3	NA	NA	9974	1476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATTTACATTTGTTGC	NA	False	NA	NA	False	AATAAA	-6	NA	146978525	146975081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146977263_146978242
ES.29785.2	chr6	-	2727	3	FSM	ENSMUSG00000072662.3	ENSMUST00000100780.3	1125	3	-126	-1476	-126	1476	multi-exon	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATTTACATTTGTTGC	NA	False	NA	NA	False	AATAAA	-6	NA	146988656	146975081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_146977263_146983083_146983219_146988245
ES.29785.3	chr6	-	3095	3	NNC	ENSMUSG00000072662.3	novel	1125	3	NA	NA	9977	1476	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATTTACATTTGTTGC	NA	False	NA	NA	False	AATAAA	-6	NA	146978522	146975081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146977263_146977338_146977736_146978005
ES.29785.4	chr6	-	2675	3	NNC	ENSMUSG00000072662.3	novel	1125	3	NA	NA	10512	1435	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	146977987	146975122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_146977263_146977338_146977736_146977849
ES.29786.1	chr6	+	4046	3	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	-186	-12838	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCATGAATTTTTT	NA	False	NA	NA	False	AATAAA	-44	NA	146992690	146996832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146994542_146994585_146995219_146995270
ES.29786.10	chr6	+	3880	3	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	116	-12704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGGTCTCATGTATCCC	NA	False	NA	NA	False	AATAAA	-22	NA	146992992	146996966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146994542_146994583_146995219_146995270
ES.29786.12	chr6	+	3633	2	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	128	-12848	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGAGCTGTGGTCTCA	NA	False	NA	NA	False	AATAAA	-34	NA	146993004	146996822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146993471_146993655
ES.29786.13	chr6	+	1354	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	728	4185	728	421	multi-exon	FALSE	canonical	3	50	junction_2	10.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGATCTCCTCAGAAG	NA	False	NA	NA	False	ATTAAA	-20	NA	146993604	147010091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146993866_147003063_147003258_147009192
ES.29786.14	chr6	+	5810	2	ISM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	9653	2	-4282	-2	3prime_fragment	FALSE	canonical	3	50	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGATGTGTGTGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	147002529	147014274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_147003258_147009192
ES.29786.2	chr6	+	6357	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	-90	0	-90	0	multi-exon	FALSE	canonical	3	50	junction_2	10.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATGTGTGTGTGGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	146992786	147014276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146993866_147003063_147003258_147009192
ES.29786.3	chr6	+	1995	5	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	-60	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.9071189210512	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGATGTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	146992816	147014273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146993081_146993655_146993866_147003063_147003258_147009192_147009738_147013491
ES.29786.4	chr6	+	3879	2	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	22	-12841	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTCTCATGAATTT	NA	False	NA	NA	False	AATAAA	-41	NA	146992898	146996829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146995197_146995248
ES.29786.5	chr6	+	1592	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	50	4625	50	-19	multi-exon	FALSE	canonical	3	50	junction_2	10.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGGTATTTAAAAGAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	146992926	147009651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146993866_147003063_147003258_147009192
ES.29786.6	chr6	+	3618	3	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	104	-12841	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTCTCATGAATTT	NA	False	NA	NA	False	AATAAA	-41	NA	146992980	146996829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146993866_146994044_146995219_146995270
ES.29786.7	chr6	+	3771	2	NNC	ENSMUSG00000040102.11	novel	6267	3	NA	NA	107	-12869	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATAAATTATTTTATTAA	NA	False	NA	NA	False	AATAAA	-13	NA	146992983	146996801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_146995209_146995255
ES.29786.8	chr6	+	3272	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	113	2882	113	-699	multi-exon	FALSE	canonical	3	50	junction_2	10.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGAATCTCTGCTAGTC	NA	False	NA	NA	False	TATAAA	-19	NA	146992989	147011394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146993866_147003063_147003258_147009192
ES.29786.9	chr6	+	2197	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	114	3956	114	650	multi-exon	FALSE	canonical	3	50	junction_2	10.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACCTGATGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	146992990	147010320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_146993866_147003063_147003258_147009192
ES.29787.1	chr6	-	5447	3	Antisense	novelGene_ENSMUSG00000040102.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTTTGATTTGTGC	NA	False	NA	NA	False	NA	NA	NA	146995635	146990080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_146990612_146990666_146995236_146995288
ES.29787.2	chr6	-	89	1	Intergenic	novelGene_24678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	146990896	146990807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_146990800_146990900
ES.29788.1	chr6	-	5115	1	Antisense	novelGene_ENSMUSG00000040102.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGGGCAAACCTATCCA	NA	False	NA	NA	False	NA	NA	NA	147003145	146998030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_146998000_147003100
ES.29788.2	chr6	-	6054	1	Antisense	novelGene_ENSMUSG00000040102.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	147004862	146998808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_146998800_147004900
ES.29789.1	chr6	+	2461	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	-2	0	-2	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377366	147534110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.10	chr6	+	2227	11	ISM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	34951	1	-20579	-1	3prime_fragment	FALSE	canonical	3	75	junction_10	7.59012516365837	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGATTGTCATGTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	147412319	147534109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.2	chr6	+	2295	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.3	chr6	+	2337	11	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.0177719288619	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGTCATGTTTTTGT	NA	False	NA	18	True	AATAAA	-19	NA	147377368	147534111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_147377558_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.4	chr6	+	4003	2	NNC	ENSMUSG00000030301.18	novel	144	3	NA	NA	1	-30611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTTTGAGAGTGGGT	NA	False	NA	NA	False	ATTAAA	-13	NA	147377369	147381742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_147377394_147377763
ES.29789.5	chr6	+	2006	16	NNC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	25	-787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.9076712202331	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGCGTCAGTCACTAG	NA	False	NA	NA	False	AATAAA	-28	NA	147377393	147533323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_147377558_147391743_147391866_147392606_147392756_147409281_147409326_147412321_147412401_147434773_147434862_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.6	chr6	+	1947	10	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	33	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.0634202397989	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAAGTTGCTTGATTGTC	NA	False	NA	8	True	AATAAA	-9	NA	147377401	147534101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.29789.7	chr6	+	3824	12	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	33	-3	intron_retention	FALSE	canonical	3	65	junction_1	9.19486022435657	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGATTGTCATGTTT	NA	False	NA	14	True	AATAAA	-15	NA	147377401	147534107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147493714_147508379_147508494_147533072
ES.29789.9	chr6	+	2385	13	NNC	ENSMUSG00000030301.18	novel	144	3	NA	NA	14254	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7906512397091	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGCTTGATTGTCA	NA	False	NA	9	True	AATAAA	-10	NA	147391742	147534102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_147391866_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ES.2979.1	chr10	+	4527	1	Intergenic	novelGene_2319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACTGCCATATCCAGG	NA	False	NA	NA	False	NA	NA	NA	63349821	63354348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63349800_63354300
ES.29790.1	chr6	-	176	1	Intergenic	novelGene_24679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	147569452	147569276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_147569300_147569500
ES.29791.1	chr6	+	1252	1	Intergenic	novelGene_24680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	148093527	148094779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148093500_148094800
ES.29792.1	chr6	-	5173	5	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	22806	-2085	138	2085	3prime_fragment	FALSE	canonical	3	867	junction_4	39	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGATTTTATTTGGT	NA	False	NA	NA	False	TATAAA	-16	NA	148091066	148078491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983
ES.29792.10	chr6	-	3938	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148113587	148080576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.12	chr6	-	7069	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	798	junction_5	70.7925372714761	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148113511	148080576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.13	chr6	-	3709	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-8	-232	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	326.611866325291	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATACTTGTAG	NA	False	NA	NA	False	AGTAAA	-26	NA	148113528	148080808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ES.29792.14	chr6	-	3613	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	328	233	-24	-233	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTTTATACTTGTA	NA	False	NA	NA	False	AGTAAA	-25	NA	148113544	148080809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.16	chr6	-	4306	17	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	457.955715653817	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTCTGTTTATACTT	NA	False	NA	NA	False	AGTAAA	-22	NA	148113520	148080812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148104355_148104624_148106273_148106383_148107597_148107709_148108030_148108174_148109618_148109960_148113467
ES.29792.17	chr6	-	3489	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	-240	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	260.829559620066	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGAATTCTGTTTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	148113510	148080816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096753_148097542_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.18	chr6	-	3663	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-240	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	382.537153057566	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGAATTCTGTTTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	148113520	148080816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ES.29792.19	chr6	-	3477	12	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-23	-241	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	357.682000138588	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCAGAATTCTGTTTA	NA	False	NA	NA	False	AGTAAA	-17	NA	148113543	148080817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.2	chr6	-	4464	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	352	-642	0	642	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAGTTGACCCATGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	148113520	148079934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.20	chr6	-	3158	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-500	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	254.994267364756	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTGAGATAGCCTGTT	NA	False	NA	1	True	AATAAA	-33	NA	148113519	148081076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.21	chr6	-	3405	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	268	501	1	-501	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCTGAGATAGCCTGT	NA	False	NA	0	True	AATAAA	-32	NA	148113604	148081077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.22	chr6	-	3360	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	-501	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCTGAGATAGCCTGT	NA	False	NA	0	True	AATAAA	-32	NA	148113510	148081077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.23	chr6	-	3357	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	-508	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	255.41626309932	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTACCTCCTGAGAT	NA	False	NA	-7	True	AATAAA	-25	NA	148113510	148081084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148103038_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.24	chr6	-	3330	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	5	-508	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	262.458494887214	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTACCTCCTGAGAT	NA	False	NA	-7	True	AATAAA	-25	NA	148113514	148081084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089651_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.26	chr6	-	4403	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-15	-509	intron_retention	FALSE	canonical	3	798	junction_4	70.7935182218134	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTCTACCTCCTGAGA	NA	False	NA	-8	True	AATAAA	-24	NA	148113535	148081085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.27	chr6	-	6575	1	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	1929	-510	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGTCTACCTCCTGAG	NA	False	NA	-9	True	AATAAA	-23	NA	148087661	148081086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148081100_148087700
ES.29792.29	chr6	-	6862	5	NIC	ENSMUSG00000030304.12	novel	801	7	NA	NA	-2423	-511	intron_retention	FALSE	canonical	0	0	junction_3	409.93932477868	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTGTCTACCTCCTGA	NA	False	NA	-10	True	AATAAA	-22	NA	148100449	148081087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148084707_148089530_148089629_148090983_148091083_148096696_148096789_148097495
ES.29792.3	chr6	-	3887	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	338	-51	-14	51	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCATGTCATTTAATCT	NA	False	NA	NA	False	AAGAAA	-29	NA	148113534	148080525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.30	chr6	-	3281	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-25	-511	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	260.494636454	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTGTCTACCTCCTGA	NA	False	NA	-10	True	AATAAA	-22	NA	148113545	148081087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083414_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.32	chr6	-	3110	9	NNC	ENSMUSG00000030304.12	novel	1661	13	NA	NA	114	-512	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	394.585997439088	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACTGTCTACCTCCTG	NA	False	NA	-11	True	AATAAA	-21	NA	148097627	148081088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148085438_148085673_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495
ES.29792.33	chr6	-	3184	13	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	343.818952680364	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACTGTCTACCTCCTG	NA	False	NA	-11	True	AATAAA	-21	NA	148113519	148081088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106329_148108030_148108174_148113467
ES.29792.34	chr6	-	3285	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	-513	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAACTGTCTACCTCCT	NA	False	NA	-12	True	AATAAA	-20	NA	148113526	148081089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.35	chr6	-	4439	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-5	-516	intron_retention	FALSE	canonical	3	13	junction_9	264.80038341278	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTAACTGTCTACCT	NA	False	NA	-15	True	AATAAA	-17	NA	148113525	148081092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148103038_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.36	chr6	-	6151	13	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	3	-852	intron_retention	FALSE	canonical	3	6	junction_2	270.220113467192	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTTTGGGTGATGAA	NA	False	NA	NA	False	AGTAAA	-17	NA	148113500	148081428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083414_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.37	chr6	-	2944	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	281	949	14	-949	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGCCGTTGATAG	NA	False	NA	3	True	ATTAAA	-32	NA	148113591	148081525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.38	chr6	-	2925	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-2	-952	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	255.41626309932	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTCTTTGCCGTTGA	NA	False	NA	0	True	ATTAAA	-29	NA	148113522	148081528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148103038_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.39	chr6	-	2801	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-10	-960	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGCAAACTTTTCTTT	NA	False	NA	-8	True	ATTAAA	-21	NA	148113530	148081536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.4	chr6	-	4063	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	1	46	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	326.611866325291	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCAGCATGTCATTT	NA	False	NA	NA	False	AAGAAA	-24	NA	148113604	148080530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ES.29792.40	chr6	-	5925	12	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	-964	intron_retention	FALSE	canonical	3	19	junction_5	357.027952235796	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113510	148081540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.41	chr6	-	4072	12	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	8	-964	intron_retention	FALSE	canonical	3	798	junction_3	73.9053448676075	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113511	148081540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.42	chr6	-	7233	12	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-14	-964	intron_retention	FALSE	canonical	0	0	junction_4	373.267214235513	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113534	148081540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091064_148092416_148092522_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.43	chr6	-	3932	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	intron_retention	FALSE	canonical	3	798	junction_4	70.7935182218134	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113519	148081540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.44	chr6	-	2912	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-5	-964	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113525	148081540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.45	chr6	-	5435	12	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-966	intron_retention	FALSE	canonical	3	34	junction_10	363.506226713524	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148113520	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148084707_148089530_148089629_148090983_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ES.29792.46	chr6	-	2847	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-14	-966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	351.341823475482	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148113534	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091064_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.47	chr6	-	3120	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	391.926957220243	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148113520	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148104355_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.48	chr6	-	2845	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-32	-966	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	258.951618702032	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148113552	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084586_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.49	chr6	-	2775	13	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	5	-966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	271.864191994622	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148113514	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091064_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.5	chr6	-	3832	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	40	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTTAAAAATTCAGCATG	NA	False	NA	NA	False	AAGAAA	-18	NA	148113520	148080536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.50	chr6	-	4766	6	NIC	ENSMUSG00000030304.12	novel	801	7	NA	NA	-673	-966	intron_retention	FALSE	canonical	3	19	junction_3	452.92719061677	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTTTAAAGCAAACTT	NA	False	NA	-14	True	ATTAAA	-15	NA	148098699	148081542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495
ES.29792.51	chr6	-	3427	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	-967	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	256.271329030074	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTTTAAAGCAAACT	NA	False	NA	-15	True	ATTAAA	-14	NA	148113509	148081543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.53	chr6	-	2838	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-14	-968	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTTGTTTAAAGCAAAC	NA	False	NA	-16	True	ATTAAA	-13	NA	148113534	148081544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.54	chr6	-	2837	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	-968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	262.717005258645	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTTGTTTAAAGCAAAC	NA	False	NA	-16	True	ATTAAA	-13	NA	148113510	148081544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090990_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.55	chr6	-	3102	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-14	-968	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	332.990600161504	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTTGTTTAAAGCAAAC	NA	False	NA	-16	True	ATTAAA	-13	NA	148113534	148081544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148085438_148085673_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.56	chr6	-	1779	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	286	2109	19	28	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTAAGCCATATTGAC	NA	False	NA	-20	True	AATAAA	-35	NA	148113586	148082685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.57	chr6	-	2425	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	1	24	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	401.289106188496	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAATATTAAGCCATAT	NA	False	NA	-24	True	AATAAA	-31	NA	148113604	148082689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.58	chr6	-	1757	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	24	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAATATTAAGCCATAT	NA	False	NA	-24	True	AATAAA	-31	NA	148113519	148082689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.59	chr6	-	1845	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	335.171118343196	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAATATTAAGCCATAT	NA	False	NA	-24	True	AATAAA	-31	NA	148113520	148082689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103579_148103716_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.6	chr6	-	3795	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-3	36	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	344.943130549964	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATCCTTAAAAATTCAG	NA	False	NA	NA	False	AAGAAA	-14	NA	148113506	148080540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091064_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.60	chr6	-	2543	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-3	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	446.090950473863	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATTAATATTAAGCCATA	NA	False	NA	-25	True	AATAAA	-30	NA	148113506	148082690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148103993_148104624_148106273_148106383_148108030_148108174_148109618_148109960_148113467
ES.29792.61	chr6	-	6162	11	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	3	22	intron_retention	FALSE	canonical	0	0	junction_4	295.243983850645	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATTAATATTAAGCCAT	NA	False	NA	-26	True	AATAAA	-29	NA	148113500	148082691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.62	chr6	-	5531	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	8	intron_retention	FALSE	canonical	3	22	junction_10	265.83040750741	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGTTACAGCCATAT	NA	False	NA	37	True	AATAAA	-15	NA	148113519	148082705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.63	chr6	-	5646	2	ISM	ENSMUSG00000030304.12	ENSMUST00000143282.8	769	5	1089	-100	1089	6	intron_retention	FALSE	canonical	3	957	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTGTGTTACAGCCAT	NA	False	NA	35	True	AATAAA	-13	NA	148088501	148082707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148083238_148083385
ES.29792.64	chr6	-	4933	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	37	intron_retention	FALSE	canonical	3	19	junction_5	356.429857132586	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGTCTAGACTTTAAA	NA	False	NA	-28	True	AATAAA	-19	NA	148113520	148082770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.65	chr6	-	1603	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	36	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAGTCTAGACTTTAA	NA	False	NA	-29	True	AATAAA	-18	NA	148113526	148082771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.66	chr6	-	1718	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	3	36	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	326.611866325291	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAGTCTAGACTTTAA	NA	False	NA	-29	True	AATAAA	-18	NA	148113500	148082771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
ES.29792.67	chr6	-	4870	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	33	intron_retention	FALSE	canonical	3	798	junction_5	70.7925372714761	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACTAGTCTAGACTT	NA	False	NA	-32	True	AATAAA	-15	NA	148113510	148082774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.68	chr6	-	7198	11	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	31	intron_retention	FALSE	canonical	3	867	junction_3	59.0559903820095	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGAAAACTAGTCTAGAC	NA	False	NA	-34	True	AATAAA	-13	NA	148113520	148082776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.69	chr6	-	4193	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	261.995189440457	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGAAAACTAGTCTAGAC	NA	False	NA	-34	True	AATAAA	-13	NA	148113509	148082776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148098271_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.7	chr6	-	3818	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-5	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	261.642490623003	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTTAAGATCCTTAAAAAT	NA	False	NA	NA	False	AAGAAA	-10	NA	148113508	148080544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091059_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.71	chr6	-	5143	4	NIC	ENSMUSG00000030304.12	novel	1661	13	NA	NA	2487	25	intron_retention	FALSE	canonical	3	867	junction_3	43.9089968002003	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148094252	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983
ES.29792.72	chr6	-	1717	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	398.353237435254	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113519	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148103038_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.73	chr6	-	2691	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	intron_retention	FALSE	canonical	3	798	junction_4	70.7935182218134	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113520	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.75	chr6	-	2392	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	3	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	388.280983887931	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113500	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148085438_148085652_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.78	chr6	-	8345	7	NIC	ENSMUSG00000030304.12	novel	1661	13	NA	NA	573	25	intron_retention	FALSE	canonical	3	798	junction_4	66.5022973705086	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148103715	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495
ES.29792.79	chr6	-	1850	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	332.990600161504	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113520	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148085438_148085673_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.80	chr6	-	1442	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-6	25	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	254.994267364756	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113509	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.81	chr6	-	1829	15	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	334.206828298933	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113520	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148085438_148085652_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.82	chr6	-	2941	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	intron_retention	FALSE	canonical	3	34	junction_12	253.876758061906	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113519	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148107709_148108030_148108174_148113467
ES.29792.83	chr6	-	1603	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_12	259.278151341978	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113519	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106371_148108030_148108174_148113467
ES.29792.84	chr6	-	1559	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	347.481011358085	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113510	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084586_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.85	chr6	-	1604	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-14	25	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	400.91214047307	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113489	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.86	chr6	-	2961	4	NIC	ENSMUSG00000030304.12	novel	628	7	NA	NA	-896	25	intron_retention	FALSE	canonical	3	44	junction_3	431.813488544405	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148092100	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089599_148090983
ES.29792.87	chr6	-	1536	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	8	25	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113511	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.88	chr6	-	2170	14	NNC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-7	25	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	347.063369211619	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113510	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091064_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104624_148106273_148106383_148108030_148108174_148113467
ES.29792.89	chr6	-	5935	12	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	-5	25	intron_retention	FALSE	canonical	3	798	junction_4	73.9402260261178	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATATGGAAAACTAGT	NA	False	NA	-40	True	AATAAA	-7	NA	148113508	148082782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.9	chr6	-	3767	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	6	23	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	251.686423065599	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCATAGCCTTAAGATC	NA	False	NA	NA	False	AAGAAA	-1	NA	148113513	148080553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.90	chr6	-	1338	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	352	2484	0	82	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAACAGCCA	NA	False	NA	NA	False	AATATA	-41	NA	148113520	148083060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29792.91	chr6	-	3326	6	FSM	ENSMUSG00000030304.12	ENSMUST00000148437.8	817	6	-44	-2465	0	-1297	multi-exon	FALSE	canonical	3	910	junction_4	66.0593672388708	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGACGTCAGCTGATG	NA	False	NA	NA	False	AATAAA	-17	NA	148113519	148097990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ES.29793.1	chr6	+	803	1	FSM	ENSMUSG00000107402.2	ENSMUST00000203932.2	3479	1	-27	2703	-27	-2703	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTGACTTTGAGCAT	4213	False	NA	NA	False	NA	NA	NA	148113723	148114526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148113700_148114500
ES.29794.1	chr6	+	3809	1	Intergenic	novelGene_24681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCCAGTCAAAGCAACT	NA	False	NA	NA	False	AATAAA	-18	NA	148122989	148126798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148123000_148126800
ES.29795.1	chr6	+	986	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	-40	-3	-40	3	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGCATATGTTTCTTC	NA	False	NA	16	True	ATTAAA	-20	NA	148256113	148257099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148256100_148257100
ES.29795.2	chr6	+	1269	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	0	-326	0	326	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTTAACAGAGAACCCC	NA	False	NA	8	True	AATAAA	-21	NA	148256153	148257422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148256200_148257400
ES.29795.3	chr6	+	834	2	Genic_Genomic	ENSMUSG00000063171.5	novel	943	1	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTTGCATATGTTT	NA	False	NA	12	True	ATTAAA	-16	NA	148256153	148257095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_148256583_148256690
ES.29795.4	chr6	+	834	2	Genic_Genomic	ENSMUSG00000063171.5	novel	943	1	NA	NA	0	-19	multi-exon	FALSE	canonical	2	209	junction_1	0	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAGCAAGCTTCT	NA	False	NA	-6	True	NA	NA	NA	148256153	148257077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_+_148256583_148256672
ES.29796.1	chr6	+	1715	1	Antisense	novelGene_ENSMUSG00000030306.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACCAAAGAGCAACA	NA	False	NA	NA	False	NA	NA	NA	148341627	148343342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148341600_148343300
ES.29797.1	chr6	-	6223	7	ISM	ENSMUSG00000030306.15	ENSMUST00000060095.15	8383	20	194798	6	192044	-6	3prime_fragment	FALSE	canonical	2	4	junction_3	2.03442593595562	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAATTCTGTCTGGCCTC	NA	False	NA	NA	False	AATAAA	-40	NA	148151089	148133933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148139433_148144685_148144764_148146181_148146305_148147208_148147347_148148231_148148377_148148900_148149037_148150985
ES.29797.2	chr6	-	4173	20	FSM	ENSMUSG00000030306.15	ENSMUST00000060095.15	8383	20	45	4165	45	-4165	multi-exon	FALSE	canonical	0	0	junction_15	3.28599816395536	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTGTTTTTTTCCTCT	8752	False	NA	NA	False	TATAAA	-20	NA	148345842	148138092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148139433_148144685_148144764_148146181_148146305_148147208_148147347_148148231_148148377_148148900_148149037_148150985_148151089_148164280_148164390_148172873_148173018_148186354_148186469_148196012_148196181_148207495_148207618_148226614_148226805_148237140_148237245_148237748_148237831_148312535_148312740_148314139_148314317_148317207_148317282_148327304_148327483_148345398
ES.29797.3	chr6	-	4401	2	NNC	ENSMUSG00000030306.15	novel	8269	19	NA	NA	199823	-4171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAATTCTTGTTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	148143310	148138098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148139433_148140243
ES.29797.4	chr6	-	3029	16	ISM	ENSMUSG00000030306.15	ENSMUST00000060095.15	8383	20	31697	9740	28943	4564	internal_fragment	FALSE	canonical	0	0	junction_14	3.31595469745224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCATGTCTGTACTC	NA	False	NA	NA	False	AATAAA	-18	NA	148314190	148143667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148144764_148146181_148146305_148147208_148147347_148148231_148148377_148148900_148149037_148150985_148151089_148164280_148164390_148172873_148173018_148186354_148186469_148196012_148196181_148207495_148207618_148226614_148226805_148237140_148237245_148237748_148237831_148312535_148312740_148314139
ES.29797.5	chr6	-	5910	1	NIC	ENSMUSG00000030306.15	novel	8383	20	NA	NA	142307	-46685	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAGAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148200826	148194916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148194900_148200800
ES.29797.6	chr6	-	1858	6	NNC	ENSMUSG00000030306.15	novel	2245	17	NA	NA	87038	-46714	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	4.14728827066554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148256095	148194945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148196181_148207495_148207618_148226614_148226805_148237140_148237245_148237748_148237831_148255970
ES.29798.1	chr6	+	176	1	Intergenic	novelGene_24682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTTACATATATT	NA	False	NA	NA	False	NA	NA	NA	148599610	148599786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148599600_148599800
ES.29799.1	chr6	-	203	1	Intergenic	novelGene_24683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGGTCTGATCACCT	NA	False	NA	NA	False	NA	NA	NA	148660432	148660229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148660200_148660400
ES.298.1	chr1	+	1982	4	Antisense	novelGene_ENSMUSG00000026116.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAAGTCTTGTCCTTGCT	NA	False	NA	NA	False	AAAAAG	-5	NA	36837741	36844846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36838169_36838355_36838485_36840905_36841036_36843550
ES.298.2	chr1	+	846	1	Antisense	novelGene_ENSMUSG00000026116.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCACCATAGCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	36838374	36839220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36838400_36839200
ES.298.3	chr1	+	2314	1	Antisense	novelGene_ENSMUSG00000026116.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAAGTCTTGTCCTTGCT	NA	False	NA	NA	False	AAAAAG	-5	NA	36842532	36844846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36842500_36844800
ES.298.4	chr1	+	3630	26	Antisense	novelGene_ENSMUSG00000026116.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGGCCCCAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	36843576	36879532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36843727_36846963_36847558_36847907_36848069_36849363_36849546_36850486_36850674_36851239_36851385_36851637_36851789_36854534_36854601_36854965_36855077_36855188_36855327_36857736_36857857_36857973_36858052_36858145_36858296_36862146_36862235_36863796_36863900_36864290_36864428_36864509_36864621_36866091_36866259_36866338_36866497_36867145_36867255_36868646_36868756_36872576_36872641_36873698_36873754_36873842_36873996_36877040_36877123_36879471
ES.298.5	chr1	+	297	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACACCAAGTAACTC	NA	False	NA	NA	False	NA	NA	NA	36858724	36859021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36858700_36859000
ES.298.6	chr1	+	2346	1	Antisense	novelGene_ENSMUSG00000026116.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGAGTATAACGCAAT	NA	False	NA	NA	False	AAGAAA	-1	NA	36867369	36869715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36867400_36869700
ES.298.7	chr1	+	184	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAACTATTTTC	NA	False	NA	NA	False	NA	NA	NA	36872969	36873153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36873000_36873200
ES.2980.1	chr10	+	146	1	Intergenic	novelGene_2320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63470154	63470300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_63470200_63470300
ES.29800.1	chr6	+	6207	21	Antisense	novelGene_ENSMUSG00000040029.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148673096	148716428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148674308_148676474_148676592_148678700_148678904_148684096_148684302_148685999_148686221_148688192_148688285_148690564_148690665_148691292_148691421_148692938_148693006_148698138_148698267_148700121_148700282_148701224_148701391_148701678_148701766_148702984_148703100_148703408_148703488_148706119_148706220_148707882_148708014_148711373_148711459_148712161_148712260_148713563_148715900_148716050
ES.29800.2	chr6	+	3662	4	Antisense	novelGene_ENSMUSG00000040029.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTCAGCTGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	148707970	148716448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148708014_148711373_148712260_148713564_148715899_148716049
ES.29800.3	chr6	+	3143	1	Antisense	novelGene_ENSMUSG00000040029.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148712347	148715490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148712300_148715500
ES.29800.4	chr6	+	3930	2	Antisense	novelGene_ENSMUSG00000040029.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148712347	148716428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148715899_148716049
ES.29801.1	chr6	+	4243	1	FSM	ENSMUSG00000107909.2	ENSMUST00000204670.2	1661	1	-709	-1873	-709	1873	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGCTGGGTATGATA	NA	False	NA	NA	False	NA	NA	NA	148732240	148736483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148732200_148736500
ES.29801.2	chr6	+	2835	1	FSM	ENSMUSG00000107909.2	ENSMUST00000204670.2	1661	1	-708	-466	-708	466	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTACA	NA	False	NA	NA	False	NA	NA	NA	148732241	148735076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148732200_148735100
ES.29802.10	chr6	-	5237	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	49.6182020385158	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732961	148672182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.11	chr6	-	4873	21	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	55.5287988344787	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732939	148672182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703040_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.14	chr6	-	5392	26	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	64.8126407423737	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732960	148672182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148716387_148716427_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.18	chr6	-	7738	23	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	8	-4	intron_retention	FALSE	canonical	2	6	junction_7	52.1705127125871	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTGTCTGCTCTATG	NA	False	NA	-5	True	AATAAA	-23	NA	148732954	148672184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691359_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.21	chr6	-	5180	26	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	63.5631843129339	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTGTCTGCTCTATG	NA	False	NA	-5	True	AATAAA	-23	NA	148732942	148672184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725955_148732661_148732749_148732872
ES.29802.22	chr6	-	5318	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	51.4618082497432	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTGTCTGCTCTATG	NA	False	NA	-5	True	AATAAA	-23	NA	148732933	148672184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719467_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.24	chr6	-	5308	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	50.424018059078	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTGTCTGCTCTATG	NA	False	NA	-5	True	AATAAA	-23	NA	148732979	148672184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691359_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.25	chr6	-	4882	2	ISM	ENSMUSG00000040029.16	ENSMUST00000239062.2	3641	12	22093	-3	960	3	intron_retention	FALSE	canonical	3	31	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTCTGTCTGCTCTAT	NA	False	NA	-6	True	AATAAA	-22	NA	148679237	148672185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148674305_148676474
ES.29802.27	chr6	-	5312	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.3922146071	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTCTGTCTGCTCTAT	NA	False	NA	-6	True	AATAAA	-22	NA	148732939	148672185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678885_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.28	chr6	-	5276	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	52.5067283473188	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTCTGTCTGCTCTAT	NA	False	NA	-6	True	AATAAA	-22	NA	148732968	148672185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148732661
ES.29802.32	chr6	-	5333	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	47.3309858572819	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732975	148672188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725955_148732661
ES.29802.33	chr6	-	5289	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	49.8051759916131	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732920	148672188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713637_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.34	chr6	-	5224	26	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	50.2758152594267	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148733071	148672188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661_148732722_148732955
ES.29802.35	chr6	-	5382	26	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	77.614431647729	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732961	148672188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691359_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148724177_148724274_148725901_148725984_148732661
ES.29802.38	chr6	-	4052	17	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.6582550896598	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732973	148672188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703040_148712165_148712261_148713564_148713655_148732955
ES.29802.4	chr6	-	5315	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	73.9581338025477	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732961	148672180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148692997_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725955_148732661
ES.29802.43	chr6	-	5506	23	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_12	53.011713191871	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAACTGAACTCTGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	148732952	148672192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701769_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.44	chr6	-	3724	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	0	1636	0	-1626	multi-exon	FALSE	canonical	3	188	junction_1	23.3505516827524	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTATGTCATTTCAT	NA	False	NA	NA	False	CATAAA	-25	NA	148732965	148673816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.45	chr6	-	3704	25	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	10	-1626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	50.7870691110335	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTATGTCATTTCAT	NA	False	NA	NA	False	CATAAA	-25	NA	148732952	148673816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678707_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.46	chr6	-	3780	26	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	-4	-1629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	66.4072767097101	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGGTTATGTCATTT	NA	False	NA	NA	False	CATAAA	-22	NA	148732928	148673819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148724177_148724274_148725901_148725984_148732661
ES.29802.47	chr6	-	3588	24	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	-1629	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	64.1991525717145	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGGTTATGTCATTT	NA	False	NA	NA	False	CATAAA	-22	NA	148732964	148673819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691359_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.49	chr6	-	945	1	Intergenic	novelGene_24684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACCAGACACTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	148683184	148682239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148682200_148683200
ES.29802.50	chr6	-	2039	5	ISM	ENSMUSG00000040029.16	ENSMUST00000145960.2	1262	10	-28	13376	10	4011	5prime_fragment	FALSE	canonical	3	206	junction_4	11.6270159542335	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTGTGATAGGAGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	148732952	148716789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.51	chr6	-	6918	1	Genic_Genomic	ENSMUSG00000040029.16	novel	NA	NA	NA	NA	-101	-5348	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGTTCTAAGGCTACA	NA	False	NA	NA	False	NA	NA	NA	148733066	148726148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_148726100_148733100
ES.29802.52	chr6	-	6641	2	Genic_Genomic	ENSMUSG00000040029.16	novel	5360	25	NA	NA	2	-5370	multi-exon	FALSE	canonical	0	0	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148732960	148726170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr6_-_148728318_148728466
ES.29802.6	chr6	-	9589	23	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_16	52.6097436219465	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732961	148672180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712208_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.7	chr6	-	5221	24	NNC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	51.4153184532063	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732955	148672180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691359_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.8	chr6	-	5221	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	10	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	52.4591838817091	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732952	148672180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29802.9	chr6	-	5222	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	51.0872340417994	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTCTGCTCTATGGG	NA	False	NA	-3	True	AATAAA	-25	NA	148732964	148672182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ES.29803.1	chr6	+	185	1	Intergenic	novelGene_24685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	148748727	148748912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148748700_148748900
ES.29804.1	chr6	-	2577	8	ISM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	33688	-849	-1874	848	3prime_fragment	FALSE	canonical	3	84	junction_1	3.61967413123427	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGTTATTGTCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	148763960	148743141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901
ES.29804.10	chr6	-	4922	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	20.7879505697144	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797682	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148746175_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.11	chr6	-	4471	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	intron_retention	FALSE	canonical	2	5	junction_13	20.6695871731884	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777980_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.12	chr6	-	3527	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	20.0096427371689	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797719	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749757_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.14	chr6	-	4555	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_16	27.9527820563778	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148785161_148785216_148792106_148792170_148796434
ES.29804.15	chr6	-	3707	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.201342258929	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744964_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.16	chr6	-	3900	17	ISM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-86	-1	1	0	intron_retention	FALSE	canonical	3	19	junction_10	17.5677260907609	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797734	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.17	chr6	-	5891	16	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	10006	0	4596	0	3prime_fragment	FALSE	canonical	3	65	junction_10	9.12481354451817	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148787729	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945
ES.29804.18	chr6	-	4036	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	24	0	intron_retention	FALSE	canonical	2	5	junction_3	26.1387037534388	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797711	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749757_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.19	chr6	-	3642	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	20.1913684039664	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797711	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777980_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.2	chr6	-	3412	13	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	12937	0	intron_retention	FALSE	canonical	2	5	junction_3	29.296852314806	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148779388	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749757_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950
ES.29804.21	chr6	-	3038	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	-86	0	1	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797734	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.22	chr6	-	2081	3	ISM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	48887	0	1921	0	3prime_fragment	FALSE	canonical	3	84	junction_1	3.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148748761	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650
ES.29804.23	chr6	-	3003	18	NNC	ENSMUSG00000030309.17	novel	2952	18	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	25.8319027025079	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797678	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797494
ES.29804.24	chr6	-	3656	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	21.1359502994715	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797674	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797494
ES.29804.25	chr6	-	4222	18	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-9	0	intron_retention	FALSE	canonical	3	10	junction_1	19.5925626733903	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797744	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.26	chr6	-	3071	18	NIC	ENSMUSG00000030309.17	novel	2952	18	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_17	25.3057428825429	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797717	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
ES.29804.27	chr6	-	4061	13	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	21797	1	-13852	0	3prime_fragment	FALSE	canonical	3	65	junction_10	9.9819281147927	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148775938	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505
ES.29804.28	chr6	-	6101	15	NNC	ENSMUSG00000030309.17	novel	2952	18	NA	NA	3730	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	28.016485671614	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148788595	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760242_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945
ES.29804.3	chr6	-	4567	18	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	-9	0	-9	0	intron_retention	FALSE	canonical	3	65	junction_10	8.75226120065937	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797744	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.30	chr6	-	3668	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.5132403591749	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797678	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774526_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
ES.29804.31	chr6	-	3687	14	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	218	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	24.7926310869383	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797430	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148792106_148792170_148796434
ES.29804.32	chr6	-	4168	14	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	18401	1	12991	0	intron_retention	FALSE	canonical	3	65	junction_10	9.6445710884046	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148779334	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950
ES.29804.34	chr6	-	5043	17	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	4422	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.4067512147567	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148787903	148743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148786053
ES.29804.35	chr6	-	4483	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-41	-1	intron_retention	FALSE	canonical	0	0	junction_3	21.5676292104113	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCCAGTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-12	NA	148797776	148743991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749717_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.36	chr6	-	4511	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	24	-1	intron_retention	FALSE	canonical	0	0	junction_12	21.7282683861099	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCCAGTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-12	NA	148797711	148743991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774526_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
ES.29804.37	chr6	-	4138	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_8	35.3753966072623	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-11	NA	148797678	148743992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148785161_148785216_148792106_148792170_148796434
ES.29804.38	chr6	-	3737	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.1869981094276	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-11	NA	148797745	148743992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778067_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.39	chr6	-	4258	18	NIC	ENSMUSG00000030309.17	novel	2952	18	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	25.4766328923076	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-11	NA	148797678	148743992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148746175_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.4	chr6	-	3524	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	20.7736181219484	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797709	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779386_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.40	chr6	-	3194	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	69	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	19.154746695993	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCAGTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-11	NA	148797579	148743992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.41	chr6	-	3410	18	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	27.480222520165	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTCCAGTTGTTTCTG	NA	False	NA	-5	True	AATAAA	-10	NA	148797678	148743993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749784_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148797515
ES.29804.42	chr6	-	629	4	NNC	ENSMUSG00000030309.17	novel	598	4	NA	NA	-20	57	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.873233599564	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTGTACCTTGTGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	148797680	148789111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148789293_148792106_148792170_148796434_148796655_148797515
ES.29804.43	chr6	-	2150	2	ISM	ENSMUSG00000030309.17	ENSMUST00000204942.2	598	4	155	1922	143	-1922	internal_fragment	FALSE	canonical	3	82	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCACGTTCTCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	148797505	148791090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148792170_148796434
ES.29804.5	chr6	-	3681	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	16	0	16	0	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797719	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ES.29804.6	chr6	-	3510	13	ISM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	18316	-1	12993	0	intron_retention	FALSE	canonical	3	19	junction_10	20.1990098767242	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148779332	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950
ES.29804.8	chr6	-	3549	18	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.4357380652205	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
ES.29804.9	chr6	-	3690	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	20.5087304505022	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797678	148743989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
ES.29805.1	chr6	-	177	1	Intergenic	novelGene_24686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAATTA	1625	False	NA	NA	False	NA	NA	NA	148813303	148813126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148813100_148813300
ES.29806.1	chr6	+	211	1	Intergenic	novelGene_24687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTTATGTAAATGGG	NA	False	NA	NA	False	NA	NA	NA	148822087	148822298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148822100_148822300
ES.29807.1	chr6	+	161	1	Intergenic	novelGene_24689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	148830832	148830993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148830800_148831000
ES.29808.1	chr6	+	225	2	Intergenic	novelGene_24690	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	255	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAATTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	148831226	148849882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148831297_148849727
ES.29808.2	chr6	+	160	1	Intergenic	novelGene_24691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTGGGGAGGAGGT	1359	False	NA	NA	False	NA	NA	NA	148832910	148833070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148832900_148833100
ES.29808.3	chr6	+	128	1	Antisense	novelGene_ENSMUSG00000039985.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	2497	False	NA	NA	False	NA	NA	NA	148834048	148834176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148834000_148834200
ES.29808.4	chr6	+	2006	2	FSM	ENSMUSG00000085355.3	ENSMUST00000154673.2	1747	2	-259	0	-259	0	multi-exon	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGTAATTCCGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	148846105	148848627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148847919_148848434
ES.29808.5	chr6	+	233	1	Intergenic	novelGene_24692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTTTTTCCAGCCAG	NA	False	NA	NA	False	NA	NA	NA	148849656	148849889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148849700_148849900
ES.29809.1	chr6	+	135	1	Intergenic	novelGene_24695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATCTAGGCATGCAGCT	NA	False	NA	NA	False	NA	NA	NA	148857850	148857985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148857800_148858000
ES.2981.1	chr10	-	171	1	Intergenic	novelGene_2321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACATTTCT	NA	False	NA	NA	False	NA	NA	NA	64544637	64544466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_64544500_64544600
ES.29810.1	chr6	+	252	1	Intergenic	novelGene_24698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTTGTCTGCATTTAA	NA	False	NA	NA	False	NA	NA	NA	148870116	148870368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148870100_148870400
ES.29811.1	chr6	+	2455	1	Antisense	novelGene_ENSMUSG00000030313.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148920224	148922679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_+_148920200_148922700
ES.29812.1	chr6	+	3579	1	FSM	ENSMUSG00000081532.2	ENSMUST00000120216.2	323	1	-288	-2968	-288	2968	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGTGCTTAAAAAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	148942189	148945768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_148942200_148945800
ES.29813.1	chr6	+	176	1	Intergenic	novelGene_24704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	148950021	148950197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148950000_148950200
ES.29814.1	chr6	+	6766	1	Intergenic	novelGene_24705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACAGCAGCAGCAGAGA	NA	False	NA	NA	False	NA	NA	NA	148961980	148968746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148962000_148968700
ES.29815.1	chr6	+	193	1	Intergenic	novelGene_24707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGAGAAGAGAAAAAAGT	NA	False	NA	NA	False	AAGAAA	-5	NA	148973095	148973288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148973100_148973300
ES.29816.1	chr6	+	172	1	Intergenic	novelGene_24710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGGCATTCTCCCTGTG	298	False	NA	NA	False	NA	NA	NA	148993016	148993188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148993000_148993200
ES.29817.1	chr6	+	171	1	Intergenic	novelGene_24711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAACAATTAAT	4691	False	NA	NA	False	NA	NA	NA	148997409	148997580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148997400_148997600
ES.29818.1	chr6	+	2796	1	Intergenic	novelGene_24712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAATTCAGATTCCAAGG	6385	False	NA	NA	False	NA	NA	NA	148999103	149001899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148999100_149001900
ES.29818.2	chr6	+	236	1	Intergenic	novelGene_24713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTTCTGGAAGACACTA	6999	False	NA	NA	False	NA	NA	NA	148999717	148999953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_148999700_1.49e+08
ES.29819.1	chr6	-	2871	6	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	1	242	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTATTTATTTAATT	NA	False	NA	NA	False	NA	NA	NA	148847652	148822290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
ES.29819.10	chr6	-	2641	6	NIC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_5	837.245818144229	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847686	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847544
ES.29819.11	chr6	-	2807	7	NNC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1117.63899210195	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846300	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148830521_148830616_148832048_148832149_148834499_148834647_148846086
ES.29819.12	chr6	-	2672	7	NNC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1028.90676880313	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847937	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843495_148843521_148847789
ES.29819.13	chr6	-	2738	7	NIC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	1019.83555319255	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847938	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843430_148843521_148847789
ES.29819.14	chr6	-	2600	6	NNC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	326	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_5	869.696176834186	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847327	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847226
ES.29819.15	chr6	-	6910	4	NIC	ENSMUSG00000039985.15	novel	571	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	2102	junction_1	75.2300176495763	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847934	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148834647_148847789
ES.29819.17	chr6	-	2866	8	NIC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	1077.78290949523	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847898	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843175_148843299_148843385_148843521_148847789
ES.29819.18	chr6	-	5660	6	NIC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	5	junction_5	883.005186847733	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846336	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843175
ES.29819.19	chr6	-	2529	7	NNC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	833.564967807282	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847887	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824099_148824166_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ES.29819.2	chr6	-	2859	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	-159	-3	-159	3	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTAAGAATTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	148848124	148822529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ES.29819.20	chr6	-	2651	7	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1070.93432727378	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847936	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148830521_148830537_148832048_148832149_148834499_148834647_148847789
ES.29819.21	chr6	-	2771	8	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1079.26002616683	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847937	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843254_148843299_148843430_148843521_148847789
ES.29819.22	chr6	-	4174	6	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	-6	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	912.113896396716	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847947	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148830521_148832149_148834499_148834647_148847789
ES.29819.23	chr6	-	2536	5	FSM	ENSMUSG00000039985.15	ENSMUST00000204119.3	571	5	-28	-1937	5	-10	multi-exon	FALSE	canonical	3	247	junction_3	848.75537553526	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847936	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148834499_148834647_148847789
ES.29819.26	chr6	-	2920	5	NIC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	-344	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1081.40611589726	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148846668	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ES.29819.27	chr6	-	6092	1	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	5991	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	2815	False	NA	NA	False	AATAAA	-15	NA	148828656	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148822600_148828700
ES.29819.29	chr6	-	2898	6	Fusion	ENSMUSG00000030313.16_ENSMUSG00000039985.15	novel	2697	6	NA	NA	-7	-10	multi-exon	FALSE	canonical	0	0	junction_5	884.963140475353	1620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	149003089	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_149002680
ES.29819.30	chr6	-	2658	6	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	912.510821853637	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847937	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830151_148832044_148832149_148834499_148834647_148847789
ES.29819.32	chr6	-	2928	8	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1016.51497474339	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847936	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148833047_148833205_148834499_148834647_148843385_148843521_148847789
ES.29819.35	chr6	-	2727	7	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1071.8724530258	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847959	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148830521_148830590_148832048_148832149_148834499_148834647_148847789
ES.29819.36	chr6	-	3527	8	NNC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	16	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1081.20118386913	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148847872	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843175_148843299_148843385_148843986_148847557
ES.29819.37	chr6	-	2881	6	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	-450	-10	intron_retention	FALSE	canonical	0	0	junction_5	884.963140475353	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAGTTGTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	148846774	148822564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846382
ES.29819.39	chr6	-	2758	7	NNC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	24	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1034.24384616653	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATAAAAGTTGTCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	148846286	148822565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148845867_148845938_148846086
ES.29819.4	chr6	-	3482	6	FSM	ENSMUSG00000039985.15	ENSMUST00000111562.8	906	6	-901	-1675	442	-3	multi-exon	FALSE	canonical	3	74	junction_5	856.005280357545	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGTCTCTGGTAAGAA	NA	False	NA	NA	False	AATAAA	-44	NA	148847211	148822535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846247
ES.29819.40	chr6	-	2656	6	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	884.963140475353	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAAAAATAAAAGTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	148847968	148822569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834636_148847785
ES.29819.41	chr6	-	2605	6	NNC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	6	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	912.510821853637	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTGAATAAATTTAGTC	NA	False	NA	NA	False	NA	NA	NA	148847935	148822591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830127_148832044_148832149_148834499_148834647_148847789
ES.29819.42	chr6	-	2436	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	24	237	0	-215	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGTATTTATTTATT	NA	False	NA	NA	False	AATATA	-18	NA	148847941	148822769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ES.29819.43	chr6	-	1480	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	31	1186	7	492	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTTTATGTGGATCT	NA	False	NA	NA	False	NA	NA	NA	148847934	148823718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ES.29819.44	chr6	-	158	1	Intergenic	novelGene_24688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5431	False	NA	NA	False	NA	NA	NA	148826040	148825882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148825900_148826000
ES.29819.45	chr6	-	4003	1	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	-17	2019	mono-exon	FALSE	NA	NA	NA	NA	NA	1082	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	148847871	148843868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148843900_148847900
ES.29819.46	chr6	-	159	1	Intergenic	novelGene_24693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	148854364	148854205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148854200_148854400
ES.29819.47	chr6	-	178	1	Intergenic	novelGene_24694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGGCGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	148856812	148856634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148856600_148856800
ES.29819.48	chr6	-	289	1	Intergenic	novelGene_24696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTCTTTAATTGAATT	NA	False	NA	NA	False	NA	NA	NA	148860207	148859918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148859900_148860200
ES.29819.49	chr6	-	207	1	Intergenic	novelGene_24697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACTGGCCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	148863904	148863697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148863700_148863900
ES.29819.5	chr6	-	2874	9	NNC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1087.03851558949	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847936	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148839237_148839318_148843175_148843299_148843495_148843521_148847789
ES.29819.50	chr6	-	247	1	Intergenic	novelGene_24699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCAGAGGTGGTTGAG	NA	False	NA	NA	False	AAAAAG	-37	NA	148882472	148882225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148882200_148882500
ES.29819.51	chr6	-	183	1	Intergenic	novelGene_24700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	148882964	148882781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148882800_148883000
ES.29819.52	chr6	-	9476	22	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.57280868875376	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTTGTTTCACT	NA	False	NA	1	True	AATAAA	-16	NA	149003043	148889568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148891551_148891770_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.53	chr6	-	9714	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	116	1	20	-1	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTGTTTTGTTTCAC	NA	False	NA	0	True	AATAAA	-15	NA	149003062	148889569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.54	chr6	-	9790	22	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	5.58829356273547	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTGTTTTGTTTCAC	NA	False	NA	0	True	AATAAA	-15	NA	149003072	148889569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.55	chr6	-	9016	21	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	338	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.5860068547293	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTTTGTTGTTTTGTT	NA	False	NA	-4	True	AATAAA	-11	NA	149002698	148889573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148891551_148891770_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_149002680
ES.29819.56	chr6	-	8153	22	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-8	-1324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.57280868875376	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTCTGTGTCTTTTGT	NA	False	NA	NA	False	AGTAAA	-10	NA	149003044	148890892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148891551_148891770_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.57	chr6	-	6397	18	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-2076	-1681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.92046477180524	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTGACAGTAAGCACAT	32	False	NA	NA	False	AATAAA	-18	NA	148946447	148891249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148891551_148891770_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980
ES.29819.58	chr6	-	7841	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	1	1989	1	-1989	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGTACTTTAGTACT	NA	False	NA	NA	False	NA	NA	NA	149003177	148891557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.59	chr6	-	7755	22	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-17	-2017	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	5.58829356273547	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149003053	148891585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.6	chr6	-	2783	7	NIC	ENSMUSG00000039985.15	novel	2785	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	1027.03576968975	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847938	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148843385_148843521_148847789
ES.29819.60	chr6	-	6425	18	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	17	-2328	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	5.92046477180524	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTCTCCAAGTCTTTG	NA	False	NA	4	True	AATAAA	-28	NA	149003065	148891896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_149002680
ES.29819.63	chr6	-	6660	19	ISM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	33193	2334	12808	-2334	3prime_fragment	FALSE	canonical	3	13	junction_11	4.68152396839605	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCTTGTTCTCCAAG	NA	False	NA	-2	True	AATAAA	-22	NA	148969985	148891902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547
ES.29819.64	chr6	-	7508	22	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-7	-2335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.27341008957049	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGCTTGTTCTCCAA	NA	False	NA	-3	True	AATAAA	-21	NA	149003043	148891903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148966760_148966908_148969547_148970215_148982303_148982414_149002680
ES.29819.65	chr6	-	5004	20	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-7	-4517	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.89172292502726	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCTCAGTGTGATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	149003043	148894085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.66	chr6	-	5266	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	46	4519	46	-4519	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGTCTCAGTGTGATT	NA	False	NA	NA	False	AATAAA	-17	NA	149003132	148894087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.67	chr6	-	5242	22	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-9	-4522	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	5.58829356273547	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGAGGTCTCAGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	149003045	148894090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.68	chr6	-	4689	22	NIC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-16	-5082	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	5.58829356273547	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTAATTTTTTTAGT	NA	False	NA	NA	False	TATAAA	-19	NA	149003052	148894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.69	chr6	-	4626	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	123	5082	-19	-5082	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTAATTTTTTTAGT	NA	False	NA	NA	False	TATAAA	-19	NA	149003055	148894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.7	chr6	-	4997	5	NIC	ENSMUSG00000039985.15	novel	2697	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	1893	junction_3	148.560383346301	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148847936	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148834647_148847789
ES.29819.70	chr6	-	4725	23	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-9	-5082	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	6.65020350151559	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTAATTTTTTTAGT	NA	False	NA	NA	False	TATAAA	-19	NA	149003045	148894650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
ES.29819.71	chr6	-	4655	22	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-7	-5086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	7.0134305882913	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATGAGTAATTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	149003043	148894654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943225_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.72	chr6	-	4395	23	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	-17	-5420	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	6.65020350151559	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGTGTAAATATGCTA	NA	False	NA	NA	False	TATAAA	-21	NA	149003053	148894988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
ES.29819.73	chr6	-	172	1	Intergenic	novelGene_24701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAATAAAATGCATAG	5387	False	NA	NA	False	NA	NA	NA	148895782	148895610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148895600_148895800
ES.29819.74	chr6	-	168	1	Intergenic	novelGene_24702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAGAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	148927979	148927811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148927800_148928000
ES.29819.75	chr6	-	166	2	Intergenic	novelGene_24703	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	100	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	148961547	148927812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148927929_148961497
ES.29819.76	chr6	-	5609	4	NIC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	20	-2475	intron_retention	FALSE	canonical	0	0	junction_1	11.4406682011537	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTAGATTTTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	149003062	148942067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148946518_148969547_148970215_148982303_148982414_149002680
ES.29819.77	chr6	-	3072	7	NNC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	36	-2476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.4114951790825	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGTAGATTTTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	149003000	148942068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148943246_148945973_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.78	chr6	-	2031	1	FSM	ENSMUSG00000030313.16	ENSMUST00000204583.2	4779	1	-1642	4390	-1642	-4390	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAAAAAAGTG	466	False	NA	NA	False	NA	NA	NA	148946013	148943982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148944000_148946000
ES.29819.79	chr6	-	3190	7	NNC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	-18	-5183	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	10.975983884018	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCTCATTTTTGCTTA	NA	False	NA	NA	False	AATATA	-15	NA	149003054	148944775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
ES.29819.8	chr6	-	3104	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	-367	0	-367	0	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846691	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ES.29819.80	chr6	-	3138	6	NIC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	1	-5219	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	9.01997782702375	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCATTTTTCAAATA	NA	False	NA	NA	False	ATTAAA	-14	NA	149003081	148944811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.81	chr6	-	2500	6	NIC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	1	-5857	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	9.01997782702375	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCACAAGTCTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	149003081	148945449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ES.29819.82	chr6	-	3275	6	Fusion	ENSMUSG00000030313.16_ENSMUSG00000107970.2	novel	715	4	NA	NA	-16	-1946	multi-exon	FALSE	canonical	2	4	junction_4	11.3384302264467	82	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCAGAATGATGTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	149003052	148954568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr6_-_148956586_148969547_148970215_148982303_148982414_148985152_148985196_148986368_148986435_149002680
ES.29819.83	chr6	-	4538	5	NNC	ENSMUSG00000030313.16	novel	3160	14	NA	NA	36	-14976	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.6858551365813	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCAGAATGATGTCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	149003142	148954568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148956586_148969547_148970215_148982303_148982414_148985152_148986435_149002680
ES.29819.84	chr6	-	3188	4	ISM	ENSMUSG00000030313.16	ENSMUST00000150436.2	3160	14	-44	39089	2	-14982	5prime_fragment	FALSE	canonical	3	13	junction_3	7.87400787401181	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAGGCCTCAGAATGAT	NA	False	NA	NA	False	AATAAA	-20	NA	149003080	148954574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_-_148956586_148969547_148970215_148982303_148982414_149002680
ES.29819.85	chr6	-	196	1	Intergenic	novelGene_24706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATCCTCTTAAAAAGAAA	NA	False	NA	NA	False	GATAAA	-11	NA	148970503	148970307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148970300_148970500
ES.29819.86	chr6	-	207	1	Intergenic	novelGene_24708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAGTCTGATGCAATA	NA	False	NA	NA	False	NA	NA	NA	148978183	148977976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148978000_148978200
ES.29819.87	chr6	-	1079	4	NNC	ENSMUSG00000030313.16	novel	9831	21	NA	NA	1	2897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.35412613473634	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTCTCCTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149003081	148980985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148981488_148982303_148982414_148986368_148986435_149002680
ES.29819.88	chr6	-	182	1	Intergenic	novelGene_24709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTTGT	7173	False	NA	NA	False	NA	NA	NA	148982162	148981980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_148982000_148982200
ES.29819.9	chr6	-	2708	6	NNC	ENSMUSG00000039985.15	novel	2737	6	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1064.06935864163	1192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846313	148822554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_148824529_148827528_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ES.2982.1	chr10	-	4643	1	Intergenic	novelGene_2322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTCTACATTTCATT	NA	False	NA	NA	False	NA	NA	NA	66549640	66544997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66545000_66549600
ES.29820.1	chr6	+	191	1	Intergenic	novelGene_24714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGTCAGGAAGACT	NA	False	NA	NA	False	NA	NA	NA	149012570	149012761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149012600_149012800
ES.29821.1	chr6	-	178	1	Intergenic	novelGene_24715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	149018205	149018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149018000_149018200
ES.29822.1	chr6	+	4337	4	NIC	ENSMUSG00000039958.18	novel	848	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	12	junction_2	5.71547606649408	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAATAAGGAACTCA	NA	False	NA	NA	False	NA	NA	NA	149043051	149052660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149043203_149044103_149044214_149045531_149048787_149051839
ES.29822.2	chr6	+	1533	6	NNC	ENSMUSG00000039958.18	novel	848	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	9.69535971483266	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAGGAACTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	149043067	149052664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149043203_149044103_149044214_149045531_149045941_149048655_149048787_149051839_149051930_149052006
ES.29822.3	chr6	+	2284	1	NIC	ENSMUSG00000039958.18	novel	478	3	NA	NA	-4	-433	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAATTAGATTTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	149043067	149045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149043100_149045400
ES.29822.4	chr6	+	1506	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	60	-4	-1	4	multi-exon	FALSE	canonical	1	2	junction_1	11.6141675934562	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAAGTGTTATCTTTC	NA	False	NA	NA	False	NA	NA	NA	149043070	149052673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
ES.29822.5	chr6	+	1599	5	FSM	ENSMUSG00000039958.18	ENSMUST00000111551.2	1558	5	-50	9	22	-4	multi-exon	FALSE	canonical	1	2	junction_2	10.2316909648406	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAATAAGGAACTCA	NA	False	NA	NA	False	NA	NA	NA	149043093	149052660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149043203_149044103_149044214_149045512_149045941_149048655_149048787_149051839
ES.29822.6	chr6	+	1489	4	FSM	ENSMUSG00000039958.18	ENSMUST00000179873.8	1576	4	83	4	22	-4	multi-exon	FALSE	canonical	1	1	junction_1	12.0830459735946	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAATAAGGAACTCA	NA	False	NA	NA	False	NA	NA	NA	149043093	149052660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149043203_149045512_149045941_149048655_149048787_149051839
ES.29823.1	chr6	-	1220	1	Antisense	novelGene_ENSMUSG00000039958.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	149048829	149047609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149047600_149048800
ES.29824.1	chr6	-	5165	1	Antisense	novelGene_ENSMUSG00000039958.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149054464	149049299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149049300_149054500
ES.29824.2	chr6	-	215	1	Intergenic	novelGene_24716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATTGTGGTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	149050037	149049822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149049800_149050000
ES.29825.1	chr6	-	1179	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	-152	430	-152	0	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCCCATATTTATTTG	NA	False	NA	0	True	TATAAA	-30	NA	149090362	149059074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ES.29825.2	chr6	-	3549	6	NIC	ENSMUSG00000068250.14	novel	1457	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	74	junction_4	12.6237870704476	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090208	149059080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_149059330_149068303_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ES.29825.3	chr6	-	3286	4	FSM	ENSMUSG00000068250.14	ENSMUST00000127743.8	3273	4	-332	319	-332	-3	multi-exon	FALSE	canonical	3	90	junction_3	10.4029910228848	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCTATTGTCCCAT	NA	False	NA	-9	True	TATAAA	-21	NA	149075201	149059083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330
ES.29825.4	chr6	-	1337	7	FSM	ENSMUSG00000068250.14	ENSMUST00000095319.10	1369	7	24	8	3	-3	multi-exon	FALSE	canonical	2	4	junction_6	36.5087508535815	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCTATTGTCCCAT	NA	False	NA	-9	True	TATAAA	-21	NA	149090159	149059083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089733
ES.29825.5	chr6	-	1148	7	NIC	ENSMUSG00000068250.14	novel	1369	7	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	33.0840680019183	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACACTTCTATTGTCCC	NA	False	NA	-11	True	TATAAA	-19	NA	149090208	149059085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
ES.29825.6	chr6	-	1174	8	NNC	ENSMUSG00000068250.14	novel	671	4	NA	NA	1	-1244	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.7865881991558	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	149090167	149060340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_-_149060375_149061141_149061419_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
ES.29826.1	chr6	-	170	1	Intergenic	novelGene_24717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATAAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	149106826	149106656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149106700_149106800
ES.29827.1	chr6	+	4882	2	Intergenic	novelGene_24718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	3070	False	NA	NA	False	NA	NA	NA	149170979	149175983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149174766_149174887
ES.29828.1	chr6	-	227	1	Intergenic	novelGene_24719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAGAGAAAAAGC	5548	False	NA	NA	False	NA	NA	NA	149183138	149182911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149182900_149183100
ES.29829.1	chr6	+	169	1	Intergenic	novelGene_24720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGAGTGAGCGGGGCC	NA	False	NA	NA	False	NA	NA	NA	149205734	149205903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149205700_149205900
ES.2983.1	chr10	-	1626	1	Intergenic	novelGene_2323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	66568826	66567200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66567200_66568800
ES.29830.1	chr6	+	6182	6	FSM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	-93	-733	-33	0	multi-exon	FALSE	canonical	3	26	junction_2	93.1227147370608	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTCTTCATGGTTCT	NA	False	NA	12	True	AATAAA	-24	NA	149210878	149237161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.10	chr6	+	5738	6	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.740792713682	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210900	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149210981_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236089
ES.29830.11	chr6	+	6073	5	FSM	ENSMUSG00000032712.17	ENSMUST00000189932.7	5269	5	-70	-734	-10	1	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTTCATGGTTCTG	NA	False	NA	13	True	AATAAA	-25	NA	149210901	149237162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149211403_149211819_149211858_149226902_149231283_149232923_149233005_149236089
ES.29830.13	chr6	+	6353	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.442248369503	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210903	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211858_149219132_149219207_149225408_149225554_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.14	chr6	+	6130	6	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	99.7344474091074	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210907	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211858_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.16	chr6	+	6318	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.964532062967	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210924	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149221393_149221507_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.17	chr6	+	6219	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	104.082973180643	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210927	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211858_149219132_149219207_149221471_149221507_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.19	chr6	+	5328	7	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	-1415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.2916577444678	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGAGTTGTGGTCTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	149210955	149235013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149234774
ES.29830.2	chr6	+	6151	6	NIC	ENSMUSG00000032712.17	novel	5269	5	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	99.8570978949419	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210891	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226902_149231283_149232923_149233005_149236089
ES.29830.20	chr6	+	6173	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	80.8489675602327	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGTTTAAGTCTTCAT	NA	False	NA	6	True	AATAAA	-18	NA	149210955	149237155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.21	chr6	+	6046	7	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.023330611746	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210955	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149227030_149231283_149232923_149233005_149236089
ES.29830.23	chr6	+	6332	9	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.454670356509	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	False	NA	1	True	AATAAA	-13	NA	149210956	149237150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149221471_149221507_149222687_149222818_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.25	chr6	+	6213	7	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.104555362155	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGTTTAAGTCTTCA	NA	False	NA	5	True	AATAAA	-17	NA	149210958	149237154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149221393_149221507_149226902_149231283_149232923_149233005_149236089
ES.29830.26	chr6	+	6206	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	99.8498873309329	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTTAAGTCTTCATGG	NA	False	NA	8	True	AATAAA	-20	NA	149210959	149237157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149221471_149221507_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.28	chr6	+	5804	5	NNC	ENSMUSG00000032712.17	novel	6066	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.298023342735	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149211048	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149227030_149231283_149232929_149233005_149236089
ES.29830.29	chr6	+	5970	7	NNC	ENSMUSG00000032712.17	novel	5269	5	NA	NA	-19	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.673390774773	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	False	NA	1	True	AATAAA	-13	NA	149211051	149237150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211858_149219132_149219207_149221393_149221507_149227030_149231283_149232923_149233005_149236089
ES.29830.3	chr6	+	5815	7	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-19	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	96.7857025713107	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149210892	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149210981_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.30	chr6	+	5996	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	94.1776436922722	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149211081	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149227848_149227899_149231283_149232923_149233005_149236089
ES.29830.31	chr6	+	6023	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	27	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	81.5148248275531	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACAGTTTAAGTCTTC	NA	False	NA	4	True	AATAAA	-16	NA	149211097	149237153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232929_149233005_149236089
ES.29830.35	chr6	+	5731	6	NNC	ENSMUSG00000032712.17	novel	5469	3	NA	NA	177	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.740792713682	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGTTTAAGTCTTCA	NA	False	NA	5	True	AATAAA	-17	NA	149211402	149237154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211478_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236089
ES.29830.36	chr6	+	5666	6	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	592	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.716280989039	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	False	NA	1	True	AATAAA	-13	NA	149211817	149237150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211858_149221471_149221507_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.37	chr6	+	5657	4	ISM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	15198	-728	16	0	3prime_fragment	FALSE	canonical	3	98	junction_1	76.6173754589794	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149226169	149237156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.38	chr6	+	6144	3	ISM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	15365	1	137	-1	3prime_fragment	FALSE	canonical	3	234	junction_2	22	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAAGTCTTCATGGTTC	NA	False	NA	11	True	AATAAA	-23	NA	149226290	149237160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_149231283_149232923_149233005_149236089
ES.29830.39	chr6	+	808	3	ISM	ENSMUSG00000032712.17	ENSMUST00000189932.7	5269	5	19971	-48	3987	48	3prime_fragment	FALSE	canonical	3	234	junction_2	22	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGTGATCTGCATTGTT	NA	False	NA	NA	False	AAAAAG	-43	NA	149230942	149236476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_149231283_149232923_149233005_149236089
ES.29830.4	chr6	+	6334	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-16	95	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	80.8489675602327	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCAGCATGGAAGGGTC	NA	False	NA	107	True	NA	NA	NA	149210895	149237256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.5	chr6	+	6167	6	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	89.6852273231216	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAAGTCTTCATGGTTC	NA	False	NA	11	True	AATAAA	-23	NA	149210897	149237160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236089
ES.29830.6	chr6	+	4351	3	NNC	ENSMUSG00000032712.17	novel	4152	4	NA	NA	-13	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.5	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAGTCATATAAATCCT	NA	False	NA	NA	False	NA	NA	NA	149210898	149215914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149212699_149212946
ES.29830.7	chr6	+	6323	8	NNC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.6693095803413	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTTAAGTCTTCATGG	NA	False	NA	8	True	AATAAA	-20	NA	149210898	149237157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149211403_149211819_149211858_149219132_149219207_149221393_149221507_149226229_149226299_149226902_149231283_149232923_149233005_149236093
ES.29830.8	chr6	+	6217	7	NIC	ENSMUSG00000032712.17	novel	5356	6	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	89.5693399923583	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTAAGTCTTCATGGTTC	NA	False	NA	11	True	AATAAA	-23	NA	149210898	149237160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149211403_149211819_149211858_149219132_149219207_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ES.29830.9	chr6	+	6089	5	FSM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	-25	2	-11	-2	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTAAGTCTTCATGGTT	NA	False	NA	10	True	AATAAA	-22	NA	149210900	149237159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236089
ES.29831.1	chr6	+	4793	1	Intergenic	novelGene_24721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATTTTCAGCAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	149237390	149242183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149237400_149242200
ES.29832.1	chr6	-	171	1	Intergenic	novelGene_24722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGGATTGGGA	2291	False	NA	NA	False	NA	NA	NA	149258625	149258454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149258500_149258600
ES.29833.1	chr6	-	2961	2	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCATGTCTGGATAGTC	NA	False	NA	NA	False	NA	NA	NA	149265031	149262015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149263364_149263418
ES.29833.2	chr6	-	1902	1	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATCCATCAAAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	149264138	149262236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149262200_149264100
ES.29833.3	chr6	-	1487	1	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTGAGGTGTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	149264272	149262785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149262800_149264300
ES.29833.4	chr6	-	1152	2	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTATTCGTGTCT	NA	False	NA	NA	False	NA	NA	NA	149264047	149262840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr6_-_149263364_149263418
ES.29834.1	chr6	-	181	1	Intergenic	novelGene_24723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	149270990	149270809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149270800_149271000
ES.29835.1	chr6	+	216	1	Intergenic	novelGene_24724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAACTCTTAGGTCTG	NA	False	NA	NA	False	NA	NA	NA	149279494	149279710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149279500_149279700
ES.29836.1	chr6	+	178	1	Intergenic	novelGene_24725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	149303758	149303936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149303800_149303900
ES.29837.1	chr6	-	143	1	Intergenic	novelGene_24726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTTATTTATTA	5588	False	NA	NA	False	NA	NA	NA	149304082	149303939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149303900_149304100
ES.29838.1	chr6	+	189	1	Intergenic	novelGene_24727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCCAGCAATCACAGAGA	NA	False	NA	NA	False	AAGAAA	-1	NA	149308602	149308791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149308600_149308800
ES.29839.1	chr6	+	3200	1	FSM	ENSMUSG00000003452.16	ENSMUST00000203502.2	10443	1	83	7160	-15	-7160	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAAAGAAAGAAA	135	False	NA	NA	False	NA	NA	NA	149310466	149313666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149310500_149313700
ES.29839.10	chr6	+	4033	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	16	0	16	0	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAGATA	198	False	NA	NA	False	AATGAA	-12	NA	149310529	149459317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.11	chr6	+	5384	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	61	4222	-24	250	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGAGTACCTATAAAG	211	False	NA	NA	False	AATAAA	-15	NA	149310542	149460605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ES.29839.12	chr6	+	8686	8	NIC	ENSMUSG00000003452.16	novel	2928	10	NA	NA	-12	-942	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.17162836918577	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTCTTGCTAATTATT	223	False	NA	NA	False	AAGAAA	-1	NA	149310554	149463885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420722_149458141
ES.29839.13	chr6	+	4041	7	ISM	ENSMUSG00000003452.16	ENSMUST00000003544.14	2928	10	-370	36407	-10	-112	5prime_fragment	FALSE	canonical	3	14	junction_4	5.13160143944688	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTTCTTGGATCT	225	False	NA	NA	False	ATTAAA	-22	NA	149310556	149421822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403
ES.29839.14	chr6	+	5420	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	53	-1424	0	386	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTGTAGACATTTTG	235	False	NA	NA	False	ATTAAA	-29	NA	149310566	149460741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.15	chr6	+	3204	8	NIC	ENSMUSG00000003452.16	novel	9667	9	NA	NA	17	450	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.13157112614726	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATTCATTTATTTTTA	252	False	NA	NA	False	TATAAA	-15	NA	149310583	149458679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149311140_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ES.29839.16	chr6	+	9467	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	73	-5491	20	-19	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCCCTTTTCTAAAAAC	255	False	NA	NA	False	AATAAA	-13	NA	149310586	149464808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.17	chr6	+	7100	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	73	-3124	20	2086	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCTTGCATTAAGGC	255	False	NA	NA	False	AATAAA	-13	NA	149310586	149462441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.18	chr6	+	164	1	Intergenic	novelGene_24728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAATTGAAGCACAG	NA	False	NA	NA	False	NA	NA	NA	149322559	149322723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149322600_149322700
ES.29839.19	chr6	+	3389	1	Intergenic	novelGene_24729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	149377399	149380788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149377400_149380800
ES.29839.2	chr6	+	3215	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	20	6432	-12	166	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTTCGTGTGATCAAT	170	False	NA	NA	False	AATAAA	-9	NA	149310501	149458395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ES.29839.20	chr6	+	3339	1	Intergenic	novelGene_24731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6062	False	NA	NA	False	NA	NA	NA	149407738	149411077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149407700_149411100
ES.29839.21	chr6	+	3864	5	NIC	ENSMUSG00000003452.16	novel	2928	10	NA	NA	-853	72	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	7.08872343937891	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATAGAAATTTTGAAACA	5408	False	NA	NA	False	TATAAA	-29	NA	149414474	149460427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149415389_149418430_149418583_149420403_149420722_149421850_149422045_149458141
ES.29839.22	chr6	+	3501	1	Intergenic	novelGene_24735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGTGGTATCTCATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	149436645	149440146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149436600_149440100
ES.29839.23	chr6	+	176	1	Intergenic	novelGene_24736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	149454253	149454429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149454300_149454400
ES.29839.24	chr6	+	175	1	Intergenic	novelGene_24737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAACATGAAG	NA	False	NA	NA	False	NA	NA	NA	149455925	149456100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_+_149455900_149456100
ES.29839.3	chr6	+	6992	9	NNC	ENSMUSG00000003452.16	novel	9667	9	NA	NA	-10	2090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.36660026534076	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGCATTAAGGCTGCA	172	False	NA	NA	False	AATAAA	-17	NA	149310503	149462445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149310742_149310936_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.4	chr6	+	4149	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	22	5496	-10	14	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAGTAAACCTTAGCTC	172	False	NA	NA	False	AATGAA	-26	NA	149310503	149459331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ES.29839.5	chr6	+	3490	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	26	6151	-6	447	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGAATTCATTTATTT	176	False	NA	NA	False	TATAAA	-12	NA	149310507	149458676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ES.29839.6	chr6	+	8944	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	-5	-4890	-5	-620	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTTAAATTTTTATTA	177	False	NA	21	True	AATAAA	-24	NA	149310508	149464207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.7	chr6	+	5153	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	-4	-1100	-4	62	multi-exon	FALSE	canonical	3	6	junction_7	6.57763681898362	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATAAGAAGATATAGAAA	178	False	NA	NA	False	TATAAA	-19	NA	149310509	149460417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ES.29839.8	chr6	+	5551	8	NIC	ENSMUSG00000003452.16	novel	2928	10	NA	NA	13	367	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.17162836918577	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATTCTACAAATGCT	195	False	NA	NA	False	ATTAAA	-10	NA	149310526	149460722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420722_149458141
ES.29839.9	chr6	+	3102	7	ISM	ENSMUSG00000003452.16	ENSMUST00000003544.14	2928	10	-400	37376	13	42	5prime_fragment	FALSE	canonical	3	14	junction_4	5.13160143944688	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAATGCTGGTCTTTCT	195	False	NA	NA	False	NA	NA	NA	149310526	149420853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403
ES.2984.1	chr10	+	136	1	Intergenic	novelGene_2324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	66655999	66656135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66656000_66656100
ES.29840.1	chr6	-	172	1	Intergenic	novelGene_24730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	149394682	149394510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149394500_149394700
ES.29841.1	chr6	-	277	1	Intergenic	novelGene_24732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGCACAAAAACTTG	NA	False	NA	NA	False	ACTAAA	-43	NA	149421501	149421224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149421200_149421500
ES.29841.2	chr6	-	178	1	Intergenic	novelGene_24733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149421503	149421325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149421300_149421500
ES.29842.1	chr6	-	2353	1	Intergenic	novelGene_24734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149435778	149433425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr6_-_149433400_149435800
ES.29843.1	chr6	+	1465	5	NNC	ENSMUSG00000096299.4	novel	291	3	NA	NA	-40	1952	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	7.22841614740048	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGAAGGTGGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	149467547	149487106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr6_+_149467693_149483509_149483637_149483827_149483889_149485051_149486076_149486998
ES.29844.1	chr7	+	1781	1	Intergenic	novelGene_24738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	3050599	3052380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3050600_3052400
ES.29845.1	chr7	+	5127	1	Antisense	novelGene_ENSMUSG00000054753.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	2523	False	NA	NA	False	NA	NA	NA	3209615	3214742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_3209600_3214700
ES.29845.2	chr7	+	182	1	Intergenic	novelGene_24739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGCA	3125	False	NA	NA	False	NA	NA	NA	3210217	3210399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3210200_3210400
ES.29845.3	chr7	+	348	1	Intergenic	novelGene_24740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAACAAACCTGCCAG	3125	False	NA	NA	False	NA	NA	NA	3210217	3210565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3210200_3210600
ES.29846.1	chr7	-	3368	13	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	5	20638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3939192213507	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATTCTCACTACGAAG	9609	False	NA	NA	False	NA	NA	NA	3218926	3183859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3183880_3204495_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ES.29846.10	chr7	-	3331	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-1555	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.5911225590304	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	1110	False	NA	87	True	NA	NA	NA	3215886	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3215815
ES.29846.13	chr7	-	3385	13	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.8429079443096	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9634	False	NA	87	True	NA	NA	NA	3218901	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218336_3218401_3218840
ES.29846.14	chr7	-	3237	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	78.1811358321175	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9559	False	NA	87	True	NA	NA	NA	3218976	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3213722_3214128_3218840
ES.29846.15	chr7	-	3040	11	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	74.2603528135976	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	2650	False	NA	87	True	NA	NA	NA	3214346	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3214161
ES.29846.16	chr7	-	3068	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.7280701713479	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9638	False	NA	87	True	NA	NA	NA	3218897	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213971_3214128_3218840
ES.29846.17	chr7	-	4141	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	141	junction_10	35.1175169965076	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9604	False	NA	87	True	NA	NA	NA	3218931	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3212201_3213722_3214125_3218840
ES.29846.18	chr7	-	3374	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.5911225590304	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9574	False	NA	87	True	NA	NA	NA	3218961	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218847
ES.29846.19	chr7	-	3317	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.874771485185	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTATTTTTCTG	9634	False	NA	85	True	NA	NA	NA	3218901	3204499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205957_3206112_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
ES.29846.2	chr7	-	3412	13	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-32	20638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3939192213507	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATTCTCACTACGAAG	9572	False	NA	NA	False	NA	NA	NA	3218963	3183859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3183892_3204500_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ES.29846.20	chr7	-	3242	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	65	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.7472877420538	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGACTTTATTTTTCT	9669	False	NA	84	True	NA	NA	NA	3218866	3204500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207874_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
ES.29846.21	chr7	-	5328	8	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	30	-3	intron_retention	TRUE	canonical	0	0	junction_4	94.4403493843428	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGACTTTATTTTTCT	9634	False	NA	84	True	NA	NA	NA	3218901	3204500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3210209_3210420_3211249_3212041_3212201_3213722_3214128_3218840
ES.29846.22	chr7	-	2248	8	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	3204	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	88.9170675290137	287	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATGACTTTATTTTT	5869	False	NA	82	True	NA	NA	NA	3211127	3204502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208655_3209287_3209382_3211070
ES.29846.23	chr7	-	7570	6	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-15	-5	intron_retention	FALSE	canonical	1	2	junction_4	104.498038259098	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATGACTTTATTTTT	9589	False	NA	82	True	NA	NA	NA	3218946	3204502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208594_3214125_3218840
ES.29846.25	chr7	-	2869	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	501	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.5911225590304	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATGACTTTATTTT	3166	False	NA	81	True	NA	NA	NA	3213830	3204503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205349_3205436_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722
ES.29846.26	chr7	-	3352	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-644	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.5911225590304	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATGACTTTATTTT	2021	False	NA	81	True	NA	NA	NA	3214975	3204503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3214874
ES.29846.27	chr7	-	4904	9	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-34	-6	intron_retention	FALSE	canonical	1	2	junction_4	108.020180406256	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATGACTTTATTTT	9472	False	NA	81	True	NA	NA	NA	3219063	3204503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208594_3208735_3208891_3209115_3209268_3211249_3213722_3214128_3218840
ES.29846.30	chr7	-	5380	6	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	30	-7	intron_retention	FALSE	canonical	3	13	junction_4	100.491591688061	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATATGACTTTATTT	9634	False	NA	80	True	NA	NA	NA	3218901	3204504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3206215_3207744_3207912_3208057_3209115_3209268_3211249_3213722_3214128_3218840
ES.29846.31	chr7	-	5221	11	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	29	-8	intron_retention	FALSE	canonical	0	0	junction_6	101.367450397058	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAATATGACTTTATT	9633	False	NA	79	True	NA	NA	NA	3218902	3204505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208887_3209115_3209268_3209382_3211070_3211249_3211660_3214128_3218840
ES.29846.32	chr7	-	3162	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	77.7280701713479	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATAGTGCATTGTTCA	9604	False	NA	-4	True	ATTAAA	-20	NA	3218931	3204588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212098_3213717_3214128_3218840
ES.29846.33	chr7	-	3312	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	37	-97	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGATCTATAGTGCAT	9543	False	NA	-10	True	ATTAAA	-14	NA	3218992	3204594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
ES.29846.5	chr7	-	3468	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTATTTTTCTGTGTGTG	9488	False	NA	91	True	NA	NA	NA	3219047	3204493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
ES.29846.7	chr7	-	3565	10	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	40	0	intron_retention	FALSE	canonical	3	117	junction_9	44.8627536678999	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9644	False	NA	87	True	NA	NA	NA	3218891	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ES.29846.8	chr7	-	3633	10	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	29	0	intron_retention	FALSE	canonical	3	117	junction_9	44.7288124888943	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9633	False	NA	87	True	NA	NA	NA	3218902	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ES.29846.9	chr7	-	3364	12	NNC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.5911225590304	288	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	2650	False	NA	87	True	NA	NA	NA	3214346	3204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3214242
ES.29847.1	chr7	-	157	1	Intergenic	novelGene_24741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATATTTAA	4973	False	NA	NA	False	NA	NA	NA	3223562	3223405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3223400_3223600
ES.29848.1	chr7	+	890	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	-24	-71	-24	71	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	3230817	3231707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3230800_3231700
ES.29849.1	chr7	-	152	1	Intergenic	novelGene_24742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	3234069	3233917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3233900_3234100
ES.2985.1	chr10	+	164	1	Intergenic	novelGene_2325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	AAAAAG	-29	NA	66688174	66688338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66688200_66688300
ES.29850.1	chr7	+	180	1	Intergenic	novelGene_24743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATGAGTATACAC	NA	False	NA	NA	False	NA	NA	NA	3236968	3237148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3237000_3237100
ES.29851.1	chr7	-	141	1	Intergenic	novelGene_24744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCGAAAAAAAAAAA	7983	False	NA	NA	False	NA	NA	NA	3241777	3241636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3241600_3241800
ES.29852.1	chr7	+	318	1	Intergenic	novelGene_24745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	3242111	3242429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3242100_3242400
ES.29853.1	chr7	-	175	1	Intergenic	novelGene_24746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGATACAGGATTTCT	7150	False	NA	NA	False	NA	NA	NA	3242610	3242435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3242400_3242600
ES.29854.1	chr7	+	184	1	Intergenic	novelGene_24747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGGTAGTGAGGT	NA	False	NA	NA	False	NA	NA	NA	3248538	3248722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3248500_3248700
ES.29855.1	chr7	+	734	1	Intergenic	novelGene_24748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAATAACTGGTTGG	285	False	NA	NA	False	NA	NA	NA	3250147	3250881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3250100_3250900
ES.29856.1	chr7	+	3186	1	FSM	ENSMUSG00000077903.3	ENSMUST00000104710.3	84	1	-2810	-292	-2810	292	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCTTTCTCAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	3266504	3269690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3266500_3269700
ES.29856.2	chr7	+	3101	2	Genic_Genomic	ENSMUSG00000077886.3_ENSMUSG00000077815.3_ENSMUSG00000077903.3	novel	84	1	NA	NA	-794	175	multi-exon	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCTTTCTCAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	3266505	3269690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_3268627_3268710
ES.29856.4	chr7	+	1466	2	Genic_Genomic	ENSMUSG00000078032.3_ENSMUSG00000077903.3_ENSMUSG00000078041.3_ENSMUSG00000077886.3_ENSMUSG00000078035.3	novel	84	1	NA	NA	73	173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTGCTTTCTCAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	3267935	3269688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_3268592_3268878
ES.29856.5	chr7	+	1672	2	Genic_Genomic	ENSMUSG00000078032.3_ENSMUSG00000077903.3_ENSMUSG00000078041.3_ENSMUSG00000077886.3_ENSMUSG00000078035.3	novel	84	1	NA	NA	74	173	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTGCTTTCTCAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	3267936	3269688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_3268644_3268723
ES.29857.1	chr7	+	1831	1	Antisense	novelGene_ENSMUSG00000078817.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	3270849	3272680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_3270800_3272700
ES.29858.1	chr7	+	269	1	Intergenic	novelGene_24751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAGAGTTCCAGGACA	NA	False	NA	NA	False	NA	NA	NA	3272709	3272978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3272700_3273000
ES.29859.1	chr7	+	187	1	Intergenic	novelGene_24755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTAAAAGAAGTGAAGT	248	False	NA	NA	False	NA	NA	NA	3293408	3293595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3293400_3293600
ES.2986.1	chr10	+	176	1	Intergenic	novelGene_2327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66740106	66740282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66740100_66740300
ES.29860.1	chr7	+	175	1	Intergenic	novelGene_24757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAGATTTATA	2390	False	NA	NA	False	NA	NA	NA	3295550	3295725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3295600_3295700
ES.29861.1	chr7	+	178	1	Intergenic	novelGene_24758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	885	False	NA	NA	False	NA	NA	NA	3304589	3304767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3304600_3304800
ES.29862.1	chr7	+	179	1	Intergenic	novelGene_24759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGAGTGTTTC	437	False	NA	NA	False	NA	NA	NA	3309391	3309570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3309400_3309600
ES.29863.1	chr7	+	1491	1	Antisense	novelGene_ENSMUSG00000107413.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	4845	False	NA	NA	False	NA	NA	NA	3313799	3315290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_3313800_3315300
ES.29864.1	chr7	-	227	1	Intergenic	novelGene_24749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCGGGCATGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	3256739	3256512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3256500_3256700
ES.29864.10	chr7	-	155	1	Intergenic	novelGene_24754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	6051	False	NA	NA	False	NA	NA	NA	3291015	3290860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3290900_3291000
ES.29864.11	chr7	-	213	1	Intergenic	novelGene_24756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACTTCCTAAATGTCT	2787	False	NA	NA	False	AATAGA	-14	NA	3294279	3294066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3294100_3294300
ES.29864.12	chr7	-	163	1	Intergenic	novelGene_24760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	3312926	3312763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3312800_3312900
ES.29864.2	chr7	-	178	2	Antisense	novelGene_ENSMUSG00000077886.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	3273563	3256562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_3256718_3273540
ES.29864.3	chr7	-	172	1	Intergenic	novelGene_24750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3260807	3260635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3260600_3260800
ES.29864.4	chr7	-	4193	14	Fusion	ENSMUSG00000078817.5_ENSMUSG00000107413.2	novel	6928	10	NA	NA	17	-3131	multi-exon	FALSE	non_canonical	0	0	junction_4	1.23076923076923	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAATTGTACTCA	NA	False	NA	NA	False	NA	NA	NA	3314603	3270588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3271235_3273877_3274049_3277021_3277193_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283955_3288459_3290141_3293958_3294040_3306701_3306818_3308877_3308967_3310095_3310221_3313695_3314033_3314511
ES.29864.6	chr7	-	176	1	Intergenic	novelGene_24752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	3273563	3273387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3273400_3273600
ES.29864.7	chr7	-	230	1	Intergenic	novelGene_24753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATAAAACTTCCATTTT	4660	False	NA	NA	False	NA	NA	NA	3285483	3285253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3285300_3285500
ES.29864.8	chr7	-	4264	4	Fusion	ENSMUSG00000078817.5_ENSMUSG00000107413.2	novel	2742	3	NA	NA	-9	953	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	3314629	3287016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3290141_3293958_3294040_3310095_3310221_3313695
ES.29864.9	chr7	-	3047	4	Fusion	ENSMUSG00000078817.5_ENSMUSG00000107413.2	novel	2742	3	NA	NA	255	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAAAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3314365	3287969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3290141_3293958_3294040_3310095_3310221_3313695
ES.29865.1	chr7	-	166	1	Intergenic	novelGene_24761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3321737	3321571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3321600_3321700
ES.29866.1	chr7	-	249	1	Intergenic	novelGene_24762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCCATATAGACTGTG	NA	False	NA	NA	False	NA	NA	NA	3327050	3326801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3326800_3327000
ES.29867.1	chr7	+	217	2	Intergenic	novelGene_24764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACATGAGCTCCCGAG	NA	False	NA	NA	False	NA	NA	NA	3327542	3327888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3327704_3327832
ES.29867.2	chr7	+	221	1	Intergenic	novelGene_24763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATATATAAATAATA	NA	False	NA	NA	False	NA	NA	NA	3327542	3327763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3327500_3327800
ES.29868.1	chr7	-	155	1	Intergenic	novelGene_24765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCAT	NA	False	NA	NA	False	NA	NA	NA	3334277	3334122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3334100_3334300
ES.29869.1	chr7	+	3081	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203328.4	1898	3	-56	-1127	-56	63	multi-exon	FALSE	canonical	2	16	junction_1	468	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGACTCAGATTCTTC	849	False	NA	77	True	AATGAA	-15	NA	3337548	3347928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3337851_3341727_3341816_3345237
ES.29869.10	chr7	+	2064	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-3	1966	-3	191	multi-exon	FALSE	canonical	3	270	junction_1	341	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATATCCACATGGTA	268	False	NA	NA	False	TTTAAA	-9	NA	3339096	3346992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.29869.11	chr7	+	2818	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-3	1212	-3	-92	multi-exon	FALSE	canonical	3	270	junction_1	341	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGAGCTTTGGGTTC	268	False	NA	29	True	NA	NA	NA	3339096	3347746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.29869.12	chr7	+	3865	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	39	-1091	-2	-2	multi-exon	FALSE	canonical	3	335	junction_1	308.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCGTCCAGTTCATAG	269	False	NA	NA	False	ATTAAA	-12	NA	3339097	3348956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.13	chr7	+	2632	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	41	140	0	-113	multi-exon	FALSE	canonical	3	335	junction_1	308.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATATTTTA	271	False	NA	8	True	NA	NA	NA	3339099	3347725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.14	chr7	+	1005	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	46	1762	5	620	multi-exon	FALSE	canonical	3	335	junction_1	308.5	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGACGACTGGCGGTGTC	276	False	NA	NA	False	NA	NA	NA	3339104	3346103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.15	chr7	+	2107	1	NIC	ENSMUSG00000068566.14	novel	2813	3	NA	NA	5	-4272	mono-exon	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTCTCTTTCTCT	276	False	NA	NA	False	NA	NA	NA	3339104	3341211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3339100_3341200
ES.29869.16	chr7	+	5341	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	-2512	-31	7	4	multi-exon	FALSE	canonical	3	952	junction_1	0	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCATGCTTTCTTTCT	278	False	NA	18	True	AATATA	-12	NA	3339106	3347869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3341816_3345237
ES.29869.17	chr7	+	1857	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	11	2159	11	-2	multi-exon	FALSE	canonical	3	270	junction_1	341	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCCGGTGGCCAGAAGT	282	False	NA	NA	False	TTTAAA	-36	NA	3339110	3346799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.29869.18	chr7	+	3036	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	29	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.279220613579	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGCTTTCTTTCTCT	300	False	NA	20	True	AATATA	-14	NA	3339128	3347871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3339318_3341727_3341816_3343283_3343409_3345237
ES.29869.19	chr7	+	2711	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	228	-94	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	475	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGGAGCTTTGGGT	499	False	NA	27	True	NA	NA	NA	3339327	3347744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3339444_3341727_3341816_3345237
ES.29869.2	chr7	+	2780	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203328.4	1898	3	143	-1025	143	-12	multi-exon	FALSE	canonical	2	16	junction_1	468	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	1048	False	NA	-25	True	NA	NA	NA	3337747	3347826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3337851_3341727_3341816_3345237
ES.29869.20	chr7	+	3882	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	269	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	475	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCGTCCAGTTCATAG	540	False	NA	NA	False	ATTAAA	-12	NA	3339368	3348956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3339444_3341727_3341816_3345237
ES.29869.21	chr7	+	2830	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-114	5	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCATGCTTTCTTTCTC	2676	False	NA	19	True	AATATA	-13	NA	3341504	3347870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3341614_3341727_3341816_3345237
ES.29869.23	chr7	+	2816	4	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-83	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.7262385167301	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATTTTAATTTTCTG	2707	False	NA	16	True	NA	NA	NA	3341535	3347733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3341614_3341727_3341816_3343254_3343409_3345237
ES.29869.24	chr7	+	2774	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	-71	95	-71	-95	multi-exon	FALSE	canonical	3	952	junction_1	0	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTGGAGCTTTGGG	2719	False	NA	26	True	NA	NA	NA	3341547	3347743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3341816_3345237
ES.29869.25	chr7	+	2638	3	NNC	ENSMUSG00000068566.14	novel	2798	2	NA	NA	-61	-107	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	427.5	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATTTTAATTTTC	2729	False	NA	14	True	NA	NA	NA	3341557	3347731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3341614_3341727_3341816_3345237
ES.29869.3	chr7	+	2996	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-56	1087	-15	6	multi-exon	FALSE	canonical	3	270	junction_1	341	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCATGCTTTCTTTCTCT	215	False	NA	20	True	AATATA	-14	NA	3339043	3347871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.29869.5	chr7	+	2873	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	3	-63	3	63	multi-exon	FALSE	canonical	3	335	junction_1	308.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGACTCAGATTCTTC	233	False	NA	77	True	AATGAA	-15	NA	3339061	3347928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.6	chr7	+	2759	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	15	39	15	-12	multi-exon	FALSE	canonical	3	335	junction_1	308.5	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	245	False	NA	-25	True	NA	NA	NA	3339073	3347826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.7	chr7	+	1909	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	31	873	-10	191	multi-exon	FALSE	canonical	3	335	junction_1	308.5	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATATCCACATGGTA	261	False	NA	NA	False	TTTAAA	-9	NA	3339089	3346992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339156_3341727_3341816_3345237
ES.29869.8	chr7	+	1178	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-5	2854	-5	621	multi-exon	FALSE	canonical	3	270	junction_1	341	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGACGACTGGCGGTGTCC	266	False	NA	NA	False	NA	NA	NA	3339094	3346104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.29869.9	chr7	+	4015	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	-4	16	-4	-16	multi-exon	FALSE	canonical	3	270	junction_1	341	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGCTTG	267	False	NA	NA	False	AATACA	-33	NA	3339095	3348942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3339318_3341727_3341816_3345237
ES.2987.1	chr10	-	5103	13	NNC	ENSMUSG00000097134.3	novel	388	2	NA	NA	-51	104590	intron_retention	FALSE	canonical	0	0	junction_2	5.19347881696096	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66753569	66643677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66647035_66648774_66648899_66666627_66666800_66667872_66667958_66668159_66668225_66668315_66668469_66668729_66668880_66668968_66669111_66672202_66672350_66672531_66672834_66680032_66680220_66751634_66751739_66753454
ES.2987.10	chr10	-	479	2	FSM	ENSMUSG00000097134.3	ENSMUST00000219021.2	388	2	-85	-6	-85	6	multi-exon	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCTAACTTTAAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	66753603	66751408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66751739_66753454
ES.2987.2	chr10	-	3142	5	NNC	ENSMUSG00000097134.3	novel	388	2	NA	NA	-52	78351	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	6.80073525436772	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	66753570	66669916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66672350_66672531_66672834_66680032_66680220_66751634_66751739_66753454
ES.2987.3	chr10	-	209	1	Intergenic	novelGene_2326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAGAAATAAATCTTG	NA	False	NA	NA	False	GATAAA	-10	NA	66708889	66708680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66708700_66708900
ES.2987.4	chr10	-	4023	2	NNC	ENSMUSG00000112267.2	novel	1007	2	NA	NA	944	3127	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATATGTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	66726447	66722322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66723792_66723893
ES.2987.5	chr10	-	2546	4	Fusion	ENSMUSG00000112267.2_ENSMUSG00000097134.3	novel	1007	2	NA	NA	-44	1433	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAATGGCTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	66753562	66724016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_66726152_66727086_66727267_66751634_66751739_66753435
ES.2987.6	chr10	-	2370	4	NNC	ENSMUSG00000097134.3	novel	388	2	NA	NA	-45	13305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.9566858950296	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGGGTCTCACTATGGT	NA	False	NA	NA	False	AATAAA	-19	NA	66753563	66734962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66736883_66737491_66737729_66751634_66751739_66753454
ES.2987.7	chr10	-	1434	2	NNC	ENSMUSG00000097134.3	novel	2229	4	NA	NA	3987	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTATTCTATTTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	66749531	66747968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66748748_66748876
ES.2987.8	chr10	-	1688	3	NIC	ENSMUSG00000097134.3	novel	2229	4	NA	NA	-45	298	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66753563	66747969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_66749445_66751634_66751739_66753454
ES.2987.9	chr10	-	1778	1	Genic_Genomic	ENSMUSG00000097134.3	novel	NA	NA	NA	NA	3771	298	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66749747	66747969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_66748000_66749700
ES.29870.1	chr7	+	3180	19	NNC	ENSMUSG00000078816.11	novel	3127	18	NA	NA	-176	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	11.1964776207123	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	3351861	3379615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3351924_3352046_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.2	chr7	+	3129	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	-6	4	-6	-4	multi-exon	FALSE	canonical	3	18	junction_10	8.64845927034781	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352031	3379611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.3	chr7	+	2974	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	-123	-732	0	0	multi-exon	FALSE	canonical	3	19	junction_9	8.11802585300146	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	3352037	3379615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.4	chr7	+	3003	17	NIC	ENSMUSG00000078816.11	novel	3127	18	NA	NA	33	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	11.1242977306435	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGATGTTTTCTT	NA	False	NA	8	True	AATAAA	-19	NA	3352070	3379612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.5	chr7	+	3069	16	NIC	ENSMUSG00000078816.11	novel	3127	18	NA	NA	51	-4	intron_retention	FALSE	canonical	2	3	junction_7	11.3137084989848	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352088	3379611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.6	chr7	+	2801	16	NNC	ENSMUSG00000078816.11	novel	2119	17	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	11.6091917605548	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTGGATGTTTTC	NA	False	NA	6	True	AATAAA	-17	NA	3352162	3379610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370961_3371964_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ES.29870.7	chr7	+	2870	16	NNC	ENSMUSG00000078816.11	novel	3127	18	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.1973681932103	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGGATGTTTTCT	NA	False	NA	7	True	AATAAA	-18	NA	3352201	3379611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361142_3362213_3362349_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3377550_3377659_3378343_3378485_3378661
ES.29870.8	chr7	+	1196	3	ISM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	25511	9	195	-9	3prime_fragment	FALSE	canonical	3	43	junction_2	2.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAAATGTTTGGATGT	NA	False	NA	2	True	AATAAA	-13	NA	3377548	3379606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3377659_3378343_3378485_3378661
ES.29871.1	chr7	+	2292	6	NNC	ENSMUSG00000069806.6	novel	812	4	NA	NA	-1234	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGTCTGTGTCTCACC	NA	False	NA	10	True	AATAAA	-10	NA	3380236	3416732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3380404_3385071_3385297_3386960_3387048_3387401_3387543_3414462_3414609_3415206
ES.29871.2	chr7	+	1900	3	ISM	ENSMUSG00000069806.6	ENSMUST00000203497.2	812	4	582	-1316	582	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACACGTCTGTGTCTCAC	NA	False	NA	9	True	AATAAA	-9	NA	3387313	3416731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3387543_3414462_3414609_3415206
ES.29871.3	chr7	+	238	1	Intergenic	novelGene_24770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATTTGGGTTATAA	NA	False	NA	NA	False	NA	NA	NA	3408185	3408423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3408200_3408400
ES.29871.4	chr7	+	1885	2	ISM	ENSMUSG00000069806.6	ENSMUST00000203497.2	812	4	27522	-1321	27522	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTGTGTCTCACCAAAG	2760	False	NA	14	True	AATAAA	-14	NA	3414253	3416736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3414609_3415206
ES.29872.1	chr7	-	145	1	Intergenic	novelGene_24766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGTATTAAAACTGTT	NA	False	NA	NA	False	NA	NA	NA	3391720	3391575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3391600_3391700
ES.29873.1	chr7	-	320	1	Intergenic	novelGene_24767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATTTTAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3399698	3399378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3399400_3399700
ES.29873.2	chr7	-	175	1	Intergenic	novelGene_24768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGTGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	3399697	3399522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3399500_3399700
ES.29874.1	chr7	-	172	1	Intergenic	novelGene_24769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATATG	NA	False	NA	NA	False	NA	NA	NA	3408135	3407963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3408000_3408100
ES.29875.1	chr7	-	4461	1	Antisense	novelGene_ENSMUSG00000069806.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3416220	3411759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_3411800_3416200
ES.29876.1	chr7	-	174	1	Intergenic	novelGene_24771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3429834	3429660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3429700_3429800
ES.29877.1	chr7	+	200	1	Intergenic	novelGene_24772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGGTGGCGCACGCCT	NA	False	NA	NA	False	NA	NA	NA	3450232	3450432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3450200_3450400
ES.29878.1	chr7	-	215	1	Intergenic	novelGene_24773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAGAAACTTGTCTCCC	NA	False	NA	NA	False	AAGAAA	-12	NA	3454289	3454074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3454100_3454300
ES.29879.1	chr7	+	783	1	Genic_Genomic	ENSMUSG00000053395.16	novel	NA	NA	NA	NA	21061	613	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTTCTGGAAGTTTTA	8458	False	NA	4	True	CATAAA	-19	NA	3463994	3464777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_3464000_3464800
ES.2988.1	chr10	+	173	1	Intergenic	novelGene_2328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	66771063	66771236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66771100_66771200
ES.29880.1	chr7	+	4368	4	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-690	-2	intron_retention	FALSE	canonical	1	1	junction_1	11.115554667022	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTCTGTGTTGGAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	3472020	3484181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3472051_3473092_3473509_3478953_3479029_3480334
ES.29880.2	chr7	+	2509	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1138	-503	-671	-1	multi-exon	FALSE	canonical	2	4	junction_2	11.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTGTGTTGGAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	3472039	3484182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3473509_3478953_3479029_3483217
ES.29880.3	chr7	+	2604	4	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-603	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.115554667022	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTAGCCTGTCTGTGTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	3472107	3484177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3473509_3478953_3479029_3480334_3480503_3483217
ES.29880.4	chr7	+	2579	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-603	1	-603	-1	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCTGTGTTGGAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	3472107	3484182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
ES.29880.5	chr7	+	6630	2	ISM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	-602	0	-602	0	intron_retention	FALSE	canonical	3	27	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472108	3484183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3473509_3478953
ES.29880.6	chr7	+	4453	3	NNC	ENSMUSG00000078815.9	novel	868	3	NA	NA	-558	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTCTGTGTTGGAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	3472152	3484181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3473509_3478953_3479029_3481159
ES.29880.7	chr7	+	176	1	Intergenic	novelGene_24774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATCAAACC	NA	False	NA	NA	False	NA	NA	NA	3474852	3475028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3474900_3475000
ES.29881.1	chr7	+	1585	5	NNC	ENSMUSG00000107985.2	novel	506	4	NA	NA	149	812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.4142135623731	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGTTTGTGTCTCTA	NA	False	NA	NA	False	AATAAA	-17	NA	3500021	3524348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3500205_3501143_3501205_3522491_3522628_3522801_3522957_3523298
ES.29882.1	chr7	-	186	1	Intergenic	novelGene_24775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATAAGAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	3522264	3522078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3522100_3522300
ES.29883.1	chr7	+	266	1	Intergenic	novelGene_24776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	3524547	3524813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3524500_3524800
ES.29884.1	chr7	+	175	1	Intergenic	novelGene_24777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAGGGACACAA	NA	False	NA	NA	False	NA	NA	NA	3540934	3541109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3540900_3541100
ES.29885.1	chr7	+	2150	15	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-76006	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.102061632132	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGTGGGGCTTCCAGT	NA	False	NA	52	True	NA	NA	NA	3556977	3644266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3557248_3633028_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.10	chr7	+	405	4	NNC	ENSMUSG00000035674.14	novel	351	4	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1440.3567459333	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAATAACCCCACAAT	263	False	NA	5	True	AATAAA	-7	NA	3620379	3623145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3620407_3620615_3620691_3622428_3622507_3622920
ES.29885.11	chr7	+	641	2	FSM	ENSMUSG00000035674.14	ENSMUST00000156712.2	136	2	-1	-504	-1	504	multi-exon	FALSE	canonical	3	46	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGTGTGTGTGTGTG	266	False	NA	NA	False	NA	NA	NA	3620382	3621222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3620417_3620615
ES.29885.12	chr7	+	1282	3	ISM	ENSMUSG00000035674.14	ENSMUST00000150497.8	782	4	4	-11	-1	0	intron_retention	FALSE	canonical	3	7	junction_2	1036.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTTCGTGGGTT	266	False	NA	22	True	AATAAA	-24	NA	3620382	3623162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3620407_3620615_3621140_3622428
ES.29885.13	chr7	+	631	2	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-2	1905	-1	504	5prime_fragment	FALSE	canonical	3	2080	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTGTGTGTGTGTGTG	266	False	NA	NA	False	NA	NA	NA	3620382	3621222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3620407_3620615
ES.29885.14	chr7	+	2073	3	NIC	ENSMUSG00000035674.14	novel	782	4	NA	NA	1	-2	intron_retention	FALSE	canonical	3	2080	junction_1	689.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTTCGTGGG	269	False	NA	20	True	AATAAA	-22	NA	3620385	3623160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3620407_3620615_3622507_3622999
ES.29885.15	chr7	+	1488	3	NNC	ENSMUSG00000035674.14	novel	782	4	NA	NA	-2	-6	intron_retention	TRUE	canonical	0	0	junction_2	1040	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAATAACCCCACAAT	271	False	NA	5	True	AATAAA	-7	NA	3620387	3623145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3620407_3620615_3621690_3622750
ES.29885.16	chr7	+	571	3	ISM	ENSMUSG00000035674.14	ENSMUST00000134683.2	476	4	177	-61	177	-6	3prime_fragment	FALSE	canonical	3	7	junction_1	1726	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAATAACCCCACAAT	676	False	NA	5	True	AATAAA	-7	NA	3620792	3623145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3621140_3622428_3622507_3622999
ES.29885.17	chr7	+	2217	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	-331	1258	-331	-1	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGGGTGTGAGTGATTA	2602	False	NA	13	True	ATTAAA	-21	NA	3632652	3644227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.18	chr7	+	3153	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	-9	0	-9	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	2924	False	NA	NA	False	AATAAA	-21	NA	3632974	3645485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.19	chr7	+	3653	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	674	junction_1	80.2122185206219	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2929	False	NA	14	True	ATTAAA	-22	NA	3632979	3644228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.2	chr7	+	173	1	Intergenic	novelGene_24779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3281	False	NA	NA	False	NA	NA	NA	3574245	3574418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3574200_3574400
ES.29885.21	chr7	+	2334	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	6	-2	intron_retention	FALSE	canonical	3	674	junction_1	80.3721811325287	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2946	False	NA	12	True	ATTAAA	-20	NA	3632996	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.22	chr7	+	1890	14	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	247.033907549733	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2955	False	NA	12	True	ATTAAA	-20	NA	3633005	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639633_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.23	chr7	+	2507	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	16	-2	intron_retention	FALSE	canonical	3	674	junction_1	79.9268763030031	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2956	False	NA	12	True	ATTAAA	-20	NA	3633006	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3642704_3642787_3642887_3643795
ES.29885.24	chr7	+	3573	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	16	0	intron_retention	FALSE	canonical	3	58	junction_6	251.684539529182	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2956	False	NA	14	True	ATTAAA	-22	NA	3633006	3644228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3639199_3639358_3639660_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.25	chr7	+	1867	14	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	247.033907549733	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2957	False	NA	12	True	ATTAAA	-20	NA	3633007	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639654_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.26	chr7	+	3446	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	22	-4	intron_retention	FALSE	canonical	3	58	junction_5	251.516622850753	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2962	False	NA	10	True	ATTAAA	-18	NA	3633012	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.27	chr7	+	1952	15	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	318.879255505649	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2962	False	NA	12	True	ATTAAA	-20	NA	3633012	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633386_3633483_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.28	chr7	+	4195	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	22	-4	intron_retention	FALSE	canonical	3	674	junction_1	83.4037278434353	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2962	False	NA	10	True	ATTAAA	-18	NA	3633012	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.29	chr7	+	1837	14	FSM	ENSMUSG00000008373.17	ENSMUST00000179769.8	3125	14	30	1258	23	-2	multi-exon	FALSE	canonical	2	54	junction_9	235.328122934313	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2963	False	NA	12	True	ATTAAA	-20	NA	3633013	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.3	chr7	+	790	1	Intergenic	novelGene_24780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAACAAAAC	6372	False	NA	NA	False	NA	NA	NA	3577336	3578126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3577300_3578100
ES.29885.30	chr7	+	3122	14	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	247.692474916331	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGAGTTCAATACT	2963	False	NA	NA	False	AATAAA	-17	NA	3633013	3645481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642775_3642887_3643795
ES.29885.31	chr7	+	4084	13	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	24	-4	intron_retention	TRUE	canonical	2	3	junction_10	258.001117030312	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2964	False	NA	10	True	ATTAAA	-18	NA	3633014	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642104_3642704_3642787_3642887_3643795
ES.29885.32	chr7	+	2354	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	25	-2	intron_retention	FALSE	canonical	3	845	junction_3	49.0102030193714	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2965	False	NA	12	True	ATTAAA	-20	NA	3633015	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.33	chr7	+	3727	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-2	intron_retention	FALSE	canonical	3	674	junction_1	79.9605371417676	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2970	False	NA	12	True	ATTAAA	-20	NA	3633020	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.34	chr7	+	4933	10	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-2	intron_retention	FALSE	canonical	3	674	junction_1	90.3283448123744	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2970	False	NA	12	True	ATTAAA	-20	NA	3633020	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3642704_3642787_3642887_3643795
ES.29885.37	chr7	+	2953	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-4	intron_retention	FALSE	canonical	3	674	junction_1	83.3671556707322	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2970	False	NA	10	True	ATTAAA	-18	NA	3633020	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3642704_3642787_3642887_3643795
ES.29885.38	chr7	+	5408	11	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-4	intron_retention	FALSE	canonical	3	674	junction_1	86.4374918655094	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2970	False	NA	10	True	ATTAAA	-18	NA	3633020	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.39	chr7	+	3646	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-4	intron_retention	FALSE	canonical	3	674	junction_1	82.5881947820351	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2970	False	NA	10	True	ATTAAA	-18	NA	3633020	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.4	chr7	+	3498	1	Intergenic	novelGene_24781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6784	False	NA	NA	False	NA	NA	NA	3577748	3581246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3577700_3581200
ES.29885.40	chr7	+	5487	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	30	-4	intron_retention	FALSE	canonical	3	674	junction_1	83.2081925400686	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2970	False	NA	10	True	ATTAAA	-18	NA	3633020	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.41	chr7	+	5948	11	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	31	-4	intron_retention	FALSE	canonical	3	674	junction_1	87.1116524926488	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2971	False	NA	10	True	ATTAAA	-18	NA	3633021	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.42	chr7	+	2122	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	38	984	31	273	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGTGTACAGAAAGCA	2971	False	NA	NA	False	AAGAAA	-34	NA	3633021	3644501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.43	chr7	+	3281	11	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	31	-2	intron_retention	FALSE	canonical	0	0	junction_5	276.944037668263	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2971	False	NA	12	True	ATTAAA	-20	NA	3633021	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.44	chr7	+	827	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	31	-31	31	31	multi-exon	FALSE	canonical	3	674	junction_1	159.5	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGATGTGTTTTCT	2971	False	NA	NA	False	AATAAA	-16	NA	3633021	3634451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843
ES.29885.45	chr7	+	4069	12	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	31	-4	intron_retention	FALSE	canonical	3	674	junction_1	83.6788429672075	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2971	False	NA	10	True	ATTAAA	-18	NA	3633021	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633056_3633556_3633742_3633843_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.46	chr7	+	3081	14	FSM	ENSMUSG00000008373.17	ENSMUST00000179769.8	3125	14	45	-1	-29	0	multi-exon	FALSE	canonical	2	54	junction_9	235.328122934313	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	2978	False	NA	NA	False	AATAAA	-21	NA	3633028	3645485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.47	chr7	+	1733	15	NNC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	240.102061632132	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2979	False	NA	12	True	ATTAAA	-20	NA	3633029	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3633056_3633556_3633606_3633711_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.48	chr7	+	1950	14	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	241.003081322834	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	2999	False	NA	12	True	ATTAAA	-20	NA	3633049	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633187_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.49	chr7	+	2410	13	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	17	junction_1	250.5668573455	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGAGGGTGTGAGTGA	2999	False	NA	10	True	ATTAAA	-18	NA	3633049	3644224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633187_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.5	chr7	+	366	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	-13	162	-13	2	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCGTGGGTTTC	242	False	NA	24	True	AATAAA	-26	NA	3620358	3623164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ES.29885.50	chr7	+	4543	11	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	845	junction_2	51.0784690451858	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	3000	False	NA	12	True	ATTAAA	-20	NA	3633050	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633742_3633843_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ES.29885.52	chr7	+	6020	9	NIC	ENSMUSG00000008373.17	novel	1798	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	845	junction_2	52.9055762656452	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGGGTGTGAGTGAT	3505	False	NA	11	True	ATTAAA	-19	NA	3633555	3644225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633742_3633843_3635751_3636302_3636401_3637122_3639358_3639660_3639751_3641629_3641758_3641856_3642704_3642787_3642887_3643795
ES.29885.53	chr7	+	4638	10	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	45	-2	intron_retention	FALSE	canonical	3	845	junction_2	50.2941962142702	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	3550	False	NA	12	True	ATTAAA	-20	NA	3633600	3644226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633742_3633843_3635751_3636302_3636401_3637122_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3642704_3642787_3642887_3643795
ES.29885.54	chr7	+	5494	10	NIC	ENSMUSG00000008373.17	novel	3144	14	NA	NA	64	-5	intron_retention	FALSE	canonical	3	845	junction_2	51.9774405005446	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCATGAGTTCAATA	3569	False	NA	NA	False	AATAAA	-15	NA	3633619	3645479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3633742_3633843_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3642887_3643795
ES.29885.55	chr7	+	177	1	Intergenic	novelGene_24787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAGAAATGT	7393	False	NA	NA	False	NA	NA	NA	3637443	3637620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3637400_3637600
ES.29885.6	chr7	+	358	4	FSM	ENSMUSG00000035674.14	ENSMUST00000148403.2	343	4	-17	2	1	-2	multi-exon	FALSE	canonical	3	46	junction_1	1620.57650921585	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTTCGTGGG	256	False	NA	20	True	AATAAA	-22	NA	3620372	3623160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3620417_3620615_3620691_3622428_3622507_3622999
ES.29885.7	chr7	+	2580	2	ISM	ENSMUSG00000035674.14	ENSMUST00000150497.8	782	4	-5	-11	2	0	intron_retention	FALSE	canonical	3	2080	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTTCGTGGGTT	257	False	NA	22	True	AATAAA	-24	NA	3620373	3623162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3620407_3620615
ES.29885.8	chr7	+	510	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	2	3	2	-3	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGGGAATCTGTTTATT	257	False	NA	NA	False	AATAAA	-20	NA	3620373	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ES.29885.9	chr7	+	387	4	FSM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	-5	-31	1	-4	multi-exon	FALSE	canonical	3	11	junction_3	1435.61655357163	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAATCTTTTCTTTCGTG	263	False	NA	18	True	AATAAA	-20	NA	3620379	3623158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622951
ES.29886.1	chr7	-	1432	7	NNC	ENSMUSG00000053338.10	novel	1487	7	NA	NA	-30988	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2053452380919	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTCTCTGTCAGA	NA	False	NA	NA	False	NA	NA	NA	3582128	3535019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3535547_3537598_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3546711_3546748_3582052
ES.29886.2	chr7	-	1268	6	NNC	ENSMUSG00000053338.10	novel	1535	6	NA	NA	-30989	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.7467330487208	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACTCCTTTTTACGTG	NA	False	NA	NA	False	AATAAA	-16	NA	3582129	3537588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3546711_3547100_3582052
ES.29886.3	chr7	-	2602	5	ISM	ENSMUSG00000053338.10	ENSMUST00000203821.3	1535	6	2622	511	2516	-10	3prime_fragment	FALSE	canonical	3	31	junction_4	8.07387763097757	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAACTGAACACTCCTT	NA	False	NA	NA	False	AATAAA	-8	NA	3548518	3537596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3546711
ES.29886.4	chr7	-	3423	1	Intergenic	novelGene_24778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGTTCACTCATGTAG	NA	False	NA	NA	False	ATTAAA	-17	NA	3555285	3551862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3551900_3555300
ES.29886.5	chr7	-	803	4	NNC	ENSMUSG00000118635.2	novel	531	2	NA	NA	-18245	4724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.16496580927726	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	3582126	3557727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3558141_3562682_3562745_3563643_3563911_3582065
ES.29886.6	chr7	-	693	4	NNC	ENSMUSG00000118635.2	novel	531	2	NA	NA	-18247	4723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.16496580927726	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	3582128	3557728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3558141_3562682_3562745_3563643_3563796_3582061
ES.29886.7	chr7	-	3975	1	Intergenic	novelGene_24782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTTCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	3582134	3578159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3578200_3582100
ES.29887.1	chr7	-	4755	1	Genic_Genomic	ENSMUSG00000108644.2	novel	NA	NA	NA	NA	8879	1129	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTTGGCTTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	3598270	3593515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_3593500_3598300
ES.29887.2	chr7	-	174	1	Intergenic	novelGene_24783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAACTAAACT	NA	False	NA	NA	False	NA	NA	NA	3595851	3595677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3595700_3595900
ES.29888.1	chr7	-	130	1	Intergenic	novelGene_24784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3601406	3601276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3601300_3601400
ES.29889.1	chr7	-	134	1	Intergenic	novelGene_24785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAACGAAAACAAA	5734	False	NA	NA	False	NA	NA	NA	3610409	3610275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3610300_3610400
ES.2989.1	chr10	+	180	1	Intergenic	novelGene_2329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGAAGAGCTAAAACTT	NA	False	NA	NA	False	NA	NA	NA	66788225	66788405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66788200_66788400
ES.29890.1	chr7	-	1048	5	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	107.527903355362	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTAGGTCACCGTTT	NA	False	NA	0	True	AATAAA	-17	NA	3632880	3623321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3623474_3623745_3623983_3624061_3624132_3631826_3632086_3632550
ES.29890.12	chr7	-	1107	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	-18	2	-18	-2	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTGTCTAGGTCACCG	NA	False	NA	-3	True	AATAAA	-14	NA	3632901	3623324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ES.29890.13	chr7	-	186	1	Intergenic	novelGene_24786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATTACCAACATTACAA	5291	False	NA	NA	False	NA	NA	NA	3624608	3624422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3624400_3624600
ES.29890.2	chr7	-	4783	3	NIC	ENSMUSG00000006335.17	novel	722	5	NA	NA	102	0	intron_retention	FALSE	canonical	3	25	junction_1	124.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632724	3623322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3627669_3631822_3632086_3632550
ES.29890.3	chr7	-	1179	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	-14	1	-14	-1	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTCTAGGTCACCGT	NA	False	NA	-2	True	AATAAA	-15	NA	3632942	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ES.29890.4	chr7	-	6037	8	Fusion	ENSMUSG00000085039.3_ENSMUSG00000006335.17	novel	1091	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_5	120.805460073928	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTCTAGGTCACCGT	NA	False	NA	-2	True	AATAAA	-15	NA	3647579	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3636663_3646172_3646275_3646895_3647169_3647251
ES.29890.6	chr7	-	1481	4	NIC	ENSMUSG00000006335.17	novel	722	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	25	junction_2	116.219141663019	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTCTAGGTCACCGT	NA	False	NA	-2	True	AATAAA	-15	NA	3632889	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3624132_3627597_3627669_3631822_3632086_3632550
ES.29890.8	chr7	-	1100	5	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	237	junction_3	15.2704780540755	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTCTAGGTCACCGT	NA	False	NA	-2	True	AATAAA	-15	NA	3632591	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ES.29890.9	chr7	-	893	5	NIC	ENSMUSG00000006335.17	novel	1166	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	150	junction_1	49.7016096318821	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTCTAGGTCACCGT	NA	False	NA	-2	True	AATAAA	-15	NA	3632577	3623323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3623474_3623745_3624132_3627597_3627669_3631826_3632086_3632550
ES.29891.1	chr7	+	2717	18	NNC	ENSMUSG00000035632.17	novel	1841	12	NA	NA	-258	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	250.857698257571	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGGCCTCTCCTATC	2470	False	NA	NA	False	AATAAA	-21	NA	3648008	3664106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648139_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.10	chr7	+	4138	17	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-104	9	-20	0	intron_retention	FALSE	canonical	3	860	junction_1	79.1671244504308	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2708	False	NA	NA	False	AATAAA	-14	NA	3648246	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379
ES.29891.100	chr7	+	3118	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-9	-1006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	410.685335073514	1205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTATACAGTGAGCGTC	2760	False	NA	NA	False	NA	NA	NA	3648298	3663093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3648991_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662630_3662681
ES.29891.101	chr7	+	2663	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	251.900540596762	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGAGGCCTCTCCTAT	2760	False	NA	NA	False	AATAAA	-20	NA	3648298	3664105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658744_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.102	chr7	+	2964	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	136	junction_1	223.214302857142	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2761	False	NA	NA	False	AATAAA	-12	NA	3648299	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.103	chr7	+	2849	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	251.491839487328	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2761	False	NA	NA	False	AATAAA	-12	NA	3648299	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661204_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.105	chr7	+	3009	16	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-10	0	intron_retention	FALSE	canonical	3	163	junction_7	224.725155591348	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2802	False	NA	NA	False	AATAAA	-14	NA	3648340	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.106	chr7	+	3201	17	NNC	ENSMUSG00000035632.17	novel	1841	12	NA	NA	244	0	intron_retention	FALSE	canonical	3	29	junction_1	251.679413825903	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	3056	False	NA	NA	False	AATAAA	-14	NA	3648594	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3649065_3653799_3653875_3653979_3654048_3654266_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.107	chr7	+	465	2	Genic_Genomic	ENSMUSG00000035632.17	novel	2963	17	NA	NA	-1802	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	6967	False	NA	NA	False	AATAAA	-13	NA	3652505	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_3652881_3664008
ES.29891.108	chr7	+	3866	17	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	4157	15	-1800	-6	3prime_fragment	FALSE	canonical	3	913	junction_9	70.8236145293362	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACGGCTGGCAGCTGA	6969	False	NA	NA	False	AATAAA	-8	NA	3652507	3664093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.109	chr7	+	2569	12	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	249	0	intron_retention	FALSE	canonical	3	41	junction_10	286.952986617888	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	9280	False	NA	NA	False	AATAAA	-23	NA	3654818	3664108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661824_3662379_3662506_3663726
ES.29891.11	chr7	+	2973	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-20	1	intron_retention	FALSE	canonical	3	32	junction_4	316.690010104518	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2708	False	NA	NA	False	AATAAA	-15	NA	3648246	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.110	chr7	+	2149	12	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	461	2	combination_of_known_junctions	FALSE	canonical	3	163	junction_1	254.464240290806	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCAGCTGAGGCCTCTC	9492	False	NA	NA	False	AATAAA	-16	NA	3655030	3664101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.112	chr7	+	2166	8	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	9688	10	-3132	-1	3prime_fragment	FALSE	canonical	3	949	junction_3	45.07408866952	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	301	False	NA	NA	False	AATAAA	-13	NA	3658038	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.113	chr7	+	1801	3	NNC	ENSMUSG00000035632.17	novel	852	4	NA	NA	436	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	531.5	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	3869	False	NA	NA	False	AATAAA	-13	NA	3661606	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3661741_3662379_3662630_3662681
ES.29891.12	chr7	+	2929	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCAGCTGAGGCCTCTC	2709	False	NA	NA	False	AATAAA	-16	NA	3648247	3664101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.13	chr7	+	3360	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-103	-435	-19	435	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATTTTAAACAGTGAGA	2709	False	NA	NA	False	NA	NA	NA	3648247	3664543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.14	chr7	+	2890	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	308.430988618985	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2710	False	NA	NA	False	AATAAA	-13	NA	3648248	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655058_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.15	chr7	+	2917	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-102	7	-18	2	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCAGCTGAGGCCTCTC	2710	False	NA	NA	False	AATAAA	-16	NA	3648248	3664101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.17	chr7	+	3092	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	374.65655783955	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2712	False	NA	NA	False	AATAAA	-13	NA	3648250	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661521_3661824_3662379_3662506_3663726
ES.29891.18	chr7	+	3004	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_16	241.594000131737	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2712	False	NA	NA	False	AATAAA	-22	NA	3648250	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.19	chr7	+	8213	16	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	-7	intron_retention	FALSE	canonical	3	913	junction_8	67.1663275425682	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGACGGCTGGCAGCTG	2712	False	NA	NA	False	AATAAA	-7	NA	3648250	3664092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.20	chr7	+	3394	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	244.302254790048	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2712	False	NA	NA	False	AATAAA	-14	NA	3648250	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.21	chr7	+	2881	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	375.74451122573	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2712	False	NA	NA	False	AATAAA	-15	NA	3648250	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661611_3661741_3662379_3662506_3663726
ES.29891.22	chr7	+	3138	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	-1027	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	326.992735599658	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTATTGATGGTGCCT	2712	False	NA	NA	False	NA	NA	NA	3648250	3663072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662630_3662681
ES.29891.23	chr7	+	3012	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	371.735972456249	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2712	False	NA	NA	False	AATAAA	-23	NA	3648250	3664108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661611_3661824_3662379_3662506_3663726
ES.29891.24	chr7	+	3517	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-98	-597	-14	597	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGGTATACACCTTTA	2714	False	NA	NA	False	NA	NA	NA	3648252	3664705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.25	chr7	+	3334	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-10	407	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAATAATTCAATTTTGG	2718	False	NA	NA	False	NA	NA	NA	3648256	3664515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.27	chr7	+	3083	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	41	junction_15	248.328159901369	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCTGAGGCCTCTCCTA	2722	False	NA	NA	False	AATAAA	-19	NA	3648260	3664104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.3	chr7	+	4412	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	-79	0	-79	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTGGATAGTCCAG	2649	False	NA	38	True	NA	NA	NA	3648187	3652599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648200_3652600
ES.29891.30	chr7	+	2987	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	136	junction_1	226.592661785416	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2741	False	NA	NA	False	AATAAA	-14	NA	3648279	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.31	chr7	+	4258	15	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	860	junction_1	86.477701502427	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACGGCTGGCAGCTGA	2741	False	NA	NA	False	AATAAA	-8	NA	3648279	3664093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661741_3662379_3662506_3663726
ES.29891.32	chr7	+	2834	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	325.796308105233	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2744	False	NA	NA	False	AATAAA	-13	NA	3648282	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.33	chr7	+	2823	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	256.961299372104	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2744	False	NA	NA	False	AATAAA	-13	NA	3648282	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.35	chr7	+	2956	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	319.250337161573	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGGCCTCTCCTATC	2749	False	NA	NA	False	AATAAA	-21	NA	3648287	3664106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.36	chr7	+	3248	16	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	860	junction_1	80.8030252458959	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCTGGCAGCTGAGGC	2749	False	NA	NA	False	AATAAA	-11	NA	3648287	3664096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.37	chr7	+	2950	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	377.042084605968	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGAGGCCTCTCCTAT	2749	False	NA	NA	False	AATAAA	-20	NA	3648287	3664105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654169_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.38	chr7	+	2942	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	330.904914263504	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2749	False	NA	NA	False	AATAAA	-23	NA	3648287	3664108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654169_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.4	chr7	+	3033	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-117	-94	-33	94	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATCGTCGCCTCCGTT	2695	False	NA	NA	False	NA	NA	NA	3648233	3664202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.40	chr7	+	2888	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	391.098745042352	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2752	False	NA	NA	False	AATAAA	-13	NA	3648290	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.43	chr7	+	3100	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	250.178884097845	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648813_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.44	chr7	+	3139	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	312.697793459759	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2754	False	NA	NA	False	AATAAA	-12	NA	3648292	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648851_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.45	chr7	+	2830	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	244.832730132114	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.46	chr7	+	2970	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	311.035284327817	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654169_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.47	chr7	+	2916	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	408.244408306569	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663756
ES.29891.48	chr7	+	3101	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	248.369450784602	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2754	False	NA	NA	False	AATAAA	-22	NA	3648292	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648806_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.49	chr7	+	3030	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	860	junction_1	78.6260929971724	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2754	False	NA	NA	False	AATAAA	-22	NA	3648292	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.50	chr7	+	2710	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	315.867706966854	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2754	False	NA	NA	False	AATAAA	-22	NA	3648292	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658772_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.51	chr7	+	3326	15	NIC	ENSMUSG00000035632.17	novel	2963	17	NA	NA	4	-3	intron_retention	FALSE	canonical	3	163	junction_5	236.484801254731	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCTGGCAGCTGAGGC	2754	False	NA	NA	False	AATAAA	-11	NA	3648292	3664096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.52	chr7	+	2923	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	251.758177485451	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2754	False	NA	NA	False	AATAAA	-15	NA	3648292	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661556_3661741_3662379_3662506_3663726
ES.29891.53	chr7	+	191	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	26	4116	4	-4116	mono-exon	FALSE	NA	NA	NA	NA	NA	1103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	2754	False	NA	NA	False	NA	NA	NA	3648292	3648483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3648300_3648500
ES.29891.54	chr7	+	2964	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	1	intron_retention	FALSE	canonical	3	860	junction_1	81.3302488315387	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2754	False	NA	NA	False	AATAAA	-15	NA	3648292	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.55	chr7	+	2964	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	322.021393354196	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2754	False	NA	NA	False	AATAAA	-23	NA	3648292	3664108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.57	chr7	+	2936	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_16	318.906132104339	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2754	False	NA	NA	False	AATAAA	-14	NA	3648292	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663756
ES.29891.58	chr7	+	2904	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	327.76066253154	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661656_3661824_3662379_3662506_3663726
ES.29891.59	chr7	+	1914	11	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	318.578483265898	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654008_3658684_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.6	chr7	+	3042	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	329.156877491569	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCTGGCAGCTGAGGC	2707	False	NA	NA	False	AATAAA	-11	NA	3648245	3664096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660114_3660242_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.61	chr7	+	3509	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	4	-1	intron_retention	FALSE	canonical	3	860	junction_1	80.4726030630922	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2754	False	NA	NA	False	AATAAA	-13	NA	3648292	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3662506_3663726
ES.29891.63	chr7	+	3902	2	NNC	ENSMUSG00000035632.17	novel	639	6	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2754	False	NA	18	True	NA	NA	NA	3648292	3652579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3651853_3652237
ES.29891.65	chr7	+	4469	14	NIC	ENSMUSG00000035632.17	novel	2963	17	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_10	283.446226493862	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2754	False	NA	NA	False	AATAAA	-12	NA	3648292	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3657199_3658569_3659156_3660999_3661100_3661191_3661391_3661607_3661741_3662379
ES.29891.68	chr7	+	3117	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	29	junction_2	382.560956990058	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.69	chr7	+	3005	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	92	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	327.76066253154	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTATCGTCGCCTCCG	2755	False	NA	NA	False	NA	NA	NA	3648293	3664200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661656_3661824_3662379_3662506_3663726
ES.29891.70	chr7	+	2923	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	32	junction_4	312.96403048114	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.71	chr7	+	3106	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	41	junction_15	332.019295373025	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653796_3653875_3653979_3654048_3654266_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.72	chr7	+	2999	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	422.676411413545	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654169_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.73	chr7	+	4123	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-6	intron_retention	FALSE	non_canonical	0	0	junction_16	256.927815434121	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACGGCTGGCAGCTGA	2755	False	NA	NA	False	AATAAA	-8	NA	3648293	3664093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662621_3662674
ES.29891.74	chr7	+	3215	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	366.864340655295	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648851_3648991_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.75	chr7	+	3075	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1027	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	225.060052749816	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTATTGATGGTGCCT	2755	False	NA	NA	False	NA	NA	NA	3648293	3663072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379
ES.29891.76	chr7	+	3171	16	NIC	ENSMUSG00000035632.17	novel	2963	17	NA	NA	5	-3	intron_retention	FALSE	canonical	3	860	junction_1	83.4185164630065	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCTGGCAGCTGAGGC	2755	False	NA	NA	False	AATAAA	-11	NA	3648293	3664096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.77	chr7	+	2960	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	860	junction_1	75.4623250370673	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.78	chr7	+	4291	15	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	1	intron_retention	FALSE	canonical	2	9	junction_12	350.745888887423	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2755	False	NA	NA	False	AATAAA	-15	NA	3648293	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654936_3655031_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661656_3661824_3662379_3662506_3663726
ES.29891.80	chr7	+	3068	17	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	-57	1032	5	-1023	5prime_fragment	FALSE	canonical	3	860	junction_1	79.1671244504308	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGATGGTGCCTGCTT	2755	False	NA	NA	False	NA	NA	NA	3648293	3663076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379
ES.29891.83	chr7	+	2924	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	251.336427920825	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656143_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.84	chr7	+	3940	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	860	junction_1	80.9565614619964	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2755	False	NA	NA	False	AATAAA	-13	NA	3648293	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.85	chr7	+	2819	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	249.748233088436	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2755	False	NA	NA	False	AATAAA	-12	NA	3648293	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661656_3661741_3662379_3662506_3663726
ES.29891.86	chr7	+	2787	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	88	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	249.89012118201	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGAGTTGTATCGTCGCC	2755	False	NA	NA	False	NA	NA	NA	3648293	3664196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658772_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.87	chr7	+	3303	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	332.542444672331	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2755	False	NA	NA	False	AATAAA	-12	NA	3648293	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661656_3661741_3662379_3662506_3663726
ES.29891.88	chr7	+	3437	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	326.276667366547	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2755	False	NA	NA	False	AATAAA	-14	NA	3648293	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.89	chr7	+	3488	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	598	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGTATACACCTTTAA	2755	False	NA	NA	False	NA	NA	NA	3648293	3664706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.90	chr7	+	2913	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	325.109414640501	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	2755	False	NA	NA	False	AATAAA	-14	NA	3648293	3664099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662506_3663726
ES.29891.91	chr7	+	4131	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_16	253.357508954738	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCAGCTGAGGCCTCT	2755	False	NA	NA	False	AATAAA	-15	NA	3648293	3664100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662630_3662681
ES.29891.92	chr7	+	2975	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	250.615270565922	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTGGCAGCTGAGGCC	2755	False	NA	NA	False	AATAAA	-12	NA	3648293	3664097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654159_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.93	chr7	+	3098	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_8	389.468078387748	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2755	False	NA	NA	False	AATAAA	-22	NA	3648293	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656143_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.94	chr7	+	2906	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	378.373463007979	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	2756	False	NA	NA	False	AATAAA	-22	NA	3648294	3664107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654208_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.95	chr7	+	3461	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	386.799470329153	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2756	False	NA	NA	False	AATAAA	-13	NA	3648294	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658147_3658257_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.97	chr7	+	2884	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	332.496481236422	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCTGGCAGCTGAGGCCT	2758	False	NA	NA	False	AATAAA	-13	NA	3648296	3664098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654208_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ES.29891.99	chr7	+	2991	17	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	9	junction_14	377.758226043789	1209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGCTGGCAGCTGAGGC	2760	False	NA	NA	False	AATAAA	-11	NA	3648298	3664096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661656_3661824_3662379_3662506_3663726
ES.29892.1	chr7	-	4235	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	362	-2375	362	2375	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGCCTGATAGGCTCTG	9065	False	NA	NA	False	GATAAA	-19	NA	3668477	3660721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ES.29892.2	chr7	-	4810	1	Genic_Genomic	ENSMUSG00000078813.4	novel	NA	NA	NA	NA	3294	2361	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCACAG	1670	False	NA	NA	False	GATAAA	-5	NA	3665545	3660735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_3660700_3665500
ES.29892.3	chr7	-	1858	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	365	-1	365	1	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGCACCATCAATACTT	9068	False	NA	-18	True	NA	NA	NA	3668474	3663095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ES.29892.4	chr7	-	916	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	336	970	336	-970	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAATAGGTTTACC	9039	False	NA	NA	False	TATAAA	-25	NA	3668503	3664066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ES.29892.5	chr7	-	1379	3	ISM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	368	1885	368	-1885	5prime_fragment	FALSE	canonical	3	158	junction_2	0.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	9071	False	NA	NA	False	NA	NA	NA	3668471	3664981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_3666024_3666680_3666861_3668314
ES.29892.6	chr7	-	985	1	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	186	-4572	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTAGTGGCGGTGGCG	8889	False	NA	NA	False	NA	NA	NA	3668653	3667668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3667700_3668700
ES.29893.1	chr7	+	179	1	Intergenic	novelGene_24789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATTATAAAGACGG	NA	False	NA	NA	False	NA	NA	NA	3672217	3672396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_3672200_3672400
ES.29894.1	chr7	+	4099	7	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	558.09778613509	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	1296	False	NA	4	True	AATAAA	-14	NA	3695884	3704009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3695990_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3701288_3701367
ES.29894.11	chr7	+	1720	7	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	546.571739725598	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2025	False	NA	-2	True	AATAAA	-8	NA	3696613	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3700928_3703526
ES.29894.12	chr7	+	1428	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108629.8	1238	5	-190	0	17	0	multi-exon	FALSE	canonical	3	24	junction_4	534.869610278991	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2029	False	NA	-2	True	AATAAA	-8	NA	3696617	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703613
ES.29894.13	chr7	+	1497	5	NNC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	545.384726592155	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2043	False	NA	-2	True	AATAAA	-8	NA	3696631	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698330_3698621_3703526
ES.29894.14	chr7	+	6298	5	NIC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	31	-2	intron_retention	FALSE	canonical	3	62	junction_1	569.623998792186	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2043	False	NA	4	True	AATAAA	-14	NA	3696631	3704009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3698711
ES.29894.15	chr7	+	6389	4	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	31	-2	intron_retention	FALSE	canonical	3	62	junction_1	541.066231312458	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2043	False	NA	4	True	AATAAA	-14	NA	3696631	3704009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350
ES.29894.16	chr7	+	1371	5	NIC	ENSMUSG00000035585.17	novel	1238	5	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	583.494805032573	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2062	False	NA	-2	True	AATAAA	-8	NA	3696650	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703613
ES.29894.17	chr7	+	4097	6	NNC	ENSMUSG00000035585.17	novel	1238	5	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	548.654864190595	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2070	False	NA	-2	True	AATAAA	-8	NA	3696658	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3700823_3701288_3701367
ES.29894.18	chr7	+	4177	5	NNC	ENSMUSG00000035585.17	novel	1238	5	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	531.185937313856	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2070	False	NA	-2	True	AATAAA	-8	NA	3696658	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3700823
ES.29894.19	chr7	+	1605	6	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	566.531552519363	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2154	False	NA	-2	True	AATAAA	-8	NA	3696742	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3700823_3700870_3703526
ES.29894.2	chr7	+	1344	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	186	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.710482320946	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTATTTTGAGTCCT	1459	False	NA	3	True	AATAAA	-13	NA	3696047	3704008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696143_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.20	chr7	+	1506	6	FSM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	-14	-117	-14	0	multi-exon	FALSE	canonical	3	59	junction_5	529.055913869224	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2159	False	NA	-2	True	AATAAA	-8	NA	3696747	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ES.29894.21	chr7	+	1554	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	12	8	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	468.595241119668	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCCTTGAAATGTGGG	2187	False	NA	26	True	AATAAA	-36	NA	3696775	3704031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.22	chr7	+	1588	7	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	114	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	544.330985910431	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTATTTTGAGTC	2353	False	NA	1	True	AATAAA	-11	NA	3696941	3704006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3700928_3703526
ES.29894.23	chr7	+	1476	6	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	119	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	556.737424644688	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2358	False	NA	-2	True	AATAAA	-8	NA	3696946	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ES.29894.24	chr7	+	1714	6	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	122	0	intron_retention	FALSE	canonical	2	17	junction_2	474.028691114789	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2361	False	NA	-2	True	AATAAA	-8	NA	3696949	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697058_3697596_3697844_3697930_3698227_3698350_3698833_3700823_3700928_3703526
ES.29894.25	chr7	+	6158	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	139	1	intron_retention	TRUE	canonical	0	0	junction_4	585.05870431949	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTGTATTTTGAG	2378	False	NA	-1	True	AATAAA	-9	NA	3696966	3704004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697058_3697596_3697844_3697976_3698227_3698350_3701306_3701389
ES.29894.26	chr7	+	1808	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	143	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	503.710482320946	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCCTTGAAATGTGGGG	2382	False	NA	27	True	AATAAA	-37	NA	3696970	3704032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697414_3697504_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.27	chr7	+	1406	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	-55	1	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	489.143639435289	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTTGTATTTTGAG	2653	False	NA	-1	True	AATAAA	-9	NA	3697241	3704004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697403_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.28	chr7	+	1453	4	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	-21	0	intron_retention	FALSE	canonical	2	19	junction_1	529.150472193139	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2687	False	NA	-2	True	AATAAA	-8	NA	3697275	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697352_3697596_3698227_3698350_3698621_3703526
ES.29894.29	chr7	+	6166	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	10	0	intron_retention	TRUE	canonical	2	2	junction_4	595.945624616877	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2718	False	NA	-2	True	AATAAA	-8	NA	3697306	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697403_3697596_3697844_3697976_3698227_3698350_3701310_3701389
ES.29894.3	chr7	+	2593	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	203	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	1476	False	NA	-2	True	AATAAA	-8	NA	3696064	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3697414_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.30	chr7	+	1539	7	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	546.571739725598	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2755	False	NA	-2	True	AATAAA	-8	NA	3697343	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697414_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3700928_3703526
ES.29894.31	chr7	+	1387	4	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	530.083221977665	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2911	False	NA	-2	True	AATAAA	-8	NA	3697499	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697930_3698227_3698350_3698621_3703526
ES.29894.32	chr7	+	1336	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	-21	4	-6	-4	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAATAAATGTTTGTATT	2912	False	NA	-6	True	AATAAA	-4	NA	3697500	3703999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.33	chr7	+	4075	6	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	576.021319049912	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2927	False	NA	4	True	AATAAA	-14	NA	3697515	3704009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3701288_3701367
ES.29894.34	chr7	+	1283	4	NIC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	524.981481154865	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2936	False	NA	-2	True	AATAAA	-8	NA	3697524	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3697844_3697976_3698227_3698383_3698621_3703526
ES.29894.35	chr7	+	3945	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	595.97415002666	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTGAGTCCTT	2936	False	NA	4	True	AATAAA	-14	NA	3697524	3704009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3700823_3701288_3701367
ES.29894.36	chr7	+	1437	5	ISM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	766	-120	6	3	3prime_fragment	FALSE	canonical	3	59	junction_4	570.385998688607	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTATTTTGAGTC	2939	False	NA	1	True	AATAAA	-11	NA	3697527	3704006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ES.29894.37	chr7	+	1414	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	586.83957560819	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTTGAGTCCTTACA	2951	False	NA	7	True	AATAAA	-17	NA	3697539	3704012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3700823_3700928_3703526
ES.29894.38	chr7	+	1531	4	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	25	0	intron_retention	FALSE	canonical	3	36	junction_2	560.028570699746	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2958	False	NA	-2	True	AATAAA	-8	NA	3697546	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3698227_3698350_3698621_3700823_3700928_3703526
ES.29894.39	chr7	+	1340	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	585.09507774378	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2958	False	NA	-2	True	AATAAA	-8	NA	3697546	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3700823_3700870_3703526
ES.29894.4	chr7	+	1431	5	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	225	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	564.501107173405	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	1498	False	NA	-2	True	AATAAA	-8	NA	3696086	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696228_3697596_3697844_3697930_3698227_3698350_3698621_3703526
ES.29894.40	chr7	+	1476	6	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	569.858578947444	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	3001	False	NA	-2	True	AATAAA	-8	NA	3697589	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3700928_3703526
ES.29894.41	chr7	+	5784	2	NNC	ENSMUSG00000035585.17	novel	327	3	NA	NA	72	3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTATTTTGAGTC	3005	False	NA	1	True	AATAAA	-11	NA	3697593	3704006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3701904_3702532
ES.29894.42	chr7	+	3872	5	NNC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	72	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	595.97415002666	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTGTATTTTGAGTC	3005	False	NA	1	True	AATAAA	-11	NA	3697593	3704006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698621_3700823_3701304_3701384
ES.29894.43	chr7	+	1360	5	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	275	0	intron_retention	FALSE	canonical	3	26	junction_3	589.349800627777	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	3208	False	NA	-2	True	AATAAA	-8	NA	3697796	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3697844_3697976_3698227_3698350_3698833_3700823_3700928_3703526
ES.29894.44	chr7	+	4230	5	FSM	ENSMUSG00000006333.15_ENSMUSG00000035585.17	ENSMUST00000146927.2	813	5	-3411	-6	-3040	3	multi-exon	FALSE	canonical	3	206	junction_3	7209.4740229437	1768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCCTCTGTAGTG	9363	False	NA	6	True	AATAAA	-21	NA	3703951	3709899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ES.29894.45	chr7	+	783	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	-29	-3	-29	3	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCCTCTGTAGTG	1235	False	NA	6	True	AATAAA	-21	NA	3706962	3709899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ES.29894.46	chr7	+	927	6	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	206	junction_4	6461.44068764854	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1262	False	NA	3	True	AATAAA	-18	NA	3706989	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ES.29894.47	chr7	+	1549	4	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	206	junction_3	6046.37086744327	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1306	False	NA	3	True	AATAAA	-18	NA	3707033	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707768_3708731_3708919_3709006
ES.29894.48	chr7	+	1844	5	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_3	5942.55889221975	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1309	False	NA	3	True	AATAAA	-18	NA	3707036	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707448_3707644_3708919_3709006_3709181_3709649
ES.29894.49	chr7	+	728	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6160.51598386856	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGTGTGCCTCTGTAG	1309	False	NA	4	True	AATAAA	-19	NA	3707036	3709897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3707064_3707325_3707448_3707623_3707768_3708731_3708919_3709649
ES.29894.5	chr7	+	1322	5	NNC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.710482320946	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTGAGTCCTTACAA	1797	False	NA	8	True	AATAAA	-18	NA	3696385	3704013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696454_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.51	chr7	+	1477	6	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	823	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5818.32089180375	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGGTGTTGAATTCT	1309	False	NA	NA	False	NA	NA	NA	3707036	3710719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649_3710368_3710419
ES.29894.53	chr7	+	2401	3	FSM	ENSMUSG00000006333.15	ENSMUST00000128729.2	378	3	-1	-2022	-1	2	multi-exon	FALSE	canonical	3	8457	junction_1	2914.5	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCCTCTGTAGT	1311	False	NA	5	True	AATAAA	-20	NA	3707038	3709898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3707064_3707325_3707448_3707644
ES.29894.54	chr7	+	1321	5	FSM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	2	24	-1	-5	multi-exon	FALSE	canonical	3	206	junction_4	5925.24712564801	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAGAATTGAT	1311	False	NA	-23	True	NA	NA	NA	3707038	3709870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709006
ES.29894.55	chr7	+	1075	5	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	206	junction_3	6193.80743162071	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1311	False	NA	3	True	AATAAA	-18	NA	3707038	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707768_3708731_3708919_3709006_3709181_3709649
ES.29894.56	chr7	+	2126	3	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	242	junction_2	4107.5	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1312	False	NA	3	True	AATAAA	-18	NA	3707039	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3709181_3709649
ES.29894.57	chr7	+	554	4	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	3	288	junction_2	6025.82189875834	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAGAATTGAT	1312	False	NA	-23	True	NA	NA	NA	3707039	3709870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707448_3708731_3708919_3709649
ES.29894.59	chr7	+	2592	2	ISM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	6	-2	2	0	intron_retention	FALSE	canonical	3	8457	junction_1	0	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1315	False	NA	3	True	AATAAA	-18	NA	3707042	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3707064_3707325
ES.29894.6	chr7	+	1552	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	232	-5	5	5	multi-exon	FALSE	canonical	3	289	junction_1	380.27448967818	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACAATCCTTGAAATGT	2017	False	NA	23	True	AATAAA	-33	NA	3696605	3704028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.61	chr7	+	2504	3	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	206	junction_2	4125.5	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1315	False	NA	3	True	AATAAA	-18	NA	3707042	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3708919_3709006
ES.29894.62	chr7	+	1433	4	ISM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	7	-5	3	3	intron_retention	FALSE	canonical	3	8457	junction_1	2925.97041832088	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCCTCTGTAGTG	1316	False	NA	6	True	AATAAA	-21	NA	3707043	3709899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731
ES.29894.64	chr7	+	813	5	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	6393.90510564553	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCCTCTGTAGT	1316	False	NA	5	True	AATAAA	-20	NA	3707043	3709898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707213_3707448_3707644_3707768_3708731_3708919_3709649
ES.29894.67	chr7	+	2308	4	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	3	2	intron_retention	FALSE	canonical	3	206	junction_3	5776.41413181415	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCCTCTGTAGT	1316	False	NA	5	True	AATAAA	-20	NA	3707043	3709898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707448_3707644_3708919_3709006
ES.29894.68	chr7	+	1663	4	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	8457	junction_1	2935.87719240586	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1316	False	NA	3	True	AATAAA	-18	NA	3707043	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707064_3707325_3707448_3707644_3708919_3709649
ES.29894.69	chr7	+	2850	1	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	3	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTATTGGTGTGCCTCT	1316	False	NA	0	True	AATAAA	-15	NA	3707043	3709893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3707000_3709900
ES.29894.7	chr7	+	1526	5	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	10	8	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	477.15458710988	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCCTTGAAATGTGGG	2022	False	NA	26	True	AATAAA	-36	NA	3696610	3704031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_3696865_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ES.29894.70	chr7	+	940	6	NNC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	7091.97482793051	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTATTGGTGTGCCTCTG	1332	False	NA	1	True	AATAAA	-16	NA	3707059	3709894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3707149_3707325_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ES.29894.71	chr7	+	944	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	10	-40	10	0	multi-exon	FALSE	canonical	3	14286	junction_1	337.374503416538	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1333	False	NA	3	True	AATAAA	-18	NA	3707060	3709896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ES.29894.72	chr7	+	722	5	NNC	ENSMUSG00000006333.15	novel	813	5	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	200	junction_1	6312.58485091488	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTATTGGTGTGCCTCTG	1340	False	NA	1	True	AATAAA	-16	NA	3707067	3709894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3707113_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ES.29894.73	chr7	+	743	5	NNC	ENSMUSG00000006333.15	novel	813	5	NA	NA	37	3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	6377.90041373335	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCCTCTGTAGTG	1360	False	NA	6	True	AATAAA	-21	NA	3707087	3709899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3707149_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ES.29894.8	chr7	+	1567	6	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	540.257938396096	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2023	False	NA	-2	True	AATAAA	-8	NA	3696611	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3700823_3700870_3703526
ES.29894.9	chr7	+	1746	7	NNC	ENSMUSG00000035585.17	novel	1375	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	526.804016900234	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2023	False	NA	-2	True	AATAAA	-8	NA	3696611	3704003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3700823_3700928_3703526
ES.29895.1	chr7	-	3175	14	NIC	ENSMUSG00000019734.17	novel	2310	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	9	junction_11	9.97037030524286	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCGTTTTGAAACCCCG	5429	False	NA	-12	True	AATAAA	-16	NA	3680521	3668788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
ES.29895.10	chr7	-	4740	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	-173	1	intron_retention	FALSE	canonical	3	178	junction_3	25.2762514801718	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTGAGTATAACTGT	7220	False	NA	-1	True	AATAAA	-16	NA	3696695	3680786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.11	chr7	-	2923	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	-45	0	-45	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7348	False	NA	-2	True	AATAAA	-15	NA	3696567	3680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.12	chr7	-	4215	4	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_3	102.375127187548	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7408	False	NA	-2	True	AATAAA	-15	NA	3696507	3680787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3695739
ES.29895.13	chr7	-	4461	6	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	178	junction_3	24.1445646057244	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGTGAGTATAACT	7914	False	NA	-3	True	AATAAA	-14	NA	3696001	3680788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694935_3695038_3695118_3695739
ES.29895.17	chr7	-	3278	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	15	-2	intron_retention	FALSE	canonical	3	178	junction_4	23.9002556936578	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTTGTGAGTATAAC	7408	False	NA	-4	True	AATAAA	-13	NA	3696507	3680789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694935_3695038_3695118_3695739
ES.29895.18	chr7	-	3850	6	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_3	88.9750526833224	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTTGTGAGTATAAC	7980	False	NA	-4	True	AATAAA	-13	NA	3695935	3680789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694804_3694935_3695038_3695118_3695739
ES.29895.2	chr7	-	2301	15	FSM	ENSMUSG00000019734.17	ENSMUST00000038743.15	2310	15	8	1	8	0	multi-exon	FALSE	canonical	3	9	junction_12	9.74077271376478	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	5406	False	NA	-13	True	AATAAA	-15	NA	3680544	3668789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
ES.29895.20	chr7	-	4257	2	NNC	ENSMUSG00000035596.15	novel	1964	6	NA	NA	2239	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTTGTGAGTATA	8278	False	NA	-6	True	AATAAA	-11	NA	3685288	3680791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3684371_3684610
ES.29895.21	chr7	-	5551	7	NNC	ENSMUSG00000035596.15	novel	3379	6	NA	NA	-5	2241	intron_retention	TRUE	non_canonical	0	0	junction_1	82.9405744427231	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGATGTCATGGCTTA	7959	False	NA	NA	False	NA	NA	NA	3695956	3684115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3684540_3684619_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.22	chr7	-	3402	5	ISM	ENSMUSG00000035596.15	ENSMUST00000131688.8	3379	6	854	-249	20	249	3prime_fragment	FALSE	canonical	3	178	junction_2	23.9635139326435	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGATTTTTTTTTTTA	8818	False	NA	NA	False	NA	NA	NA	3695097	3686107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038
ES.29895.23	chr7	-	3384	6	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	178	junction_2	26.8670802284134	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCAGCTGCCTTCCTGT	7959	False	NA	NA	False	NA	NA	NA	3695956	3686362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.24	chr7	-	1952	6	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	647	6926	12	1054	5prime_fragment	FALSE	canonical	3	178	junction_2	26.8670802284134	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGGATCAACCACTCA	8040	False	NA	NA	False	TATAAA	-21	NA	3695875	3687713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.25	chr7	-	176	1	Intergenic	novelGene_24790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAGAAAGAAATAGA	1574	False	NA	NA	False	NA	NA	NA	3691992	3691816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3691800_3692000
ES.29895.3	chr7	-	3248	13	NIC	ENSMUSG00000019734.17	novel	2310	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_10	10.2316909648406	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	5428	False	NA	-13	True	AATAAA	-15	NA	3680522	3668789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3669008_3669100_3669180_3669817_3670178_3670439_3670624_3672572_3672671_3672913_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3680422
ES.29895.5	chr7	-	3605	13	NIC	ENSMUSG00000019734.17	novel	2310	15	NA	NA	9	-1	intron_retention	FALSE	canonical	3	10	junction_9	9.9666109251507	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGCGTTTTGAAACCC	5436	False	NA	-14	True	AATAAA	-14	NA	3680514	3668790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3679768_3680422
ES.29895.7	chr7	-	3524	22	Fusion	ENSMUSG00000035596.15_ENSMUSG00000019734.17	novel	2310	15	NA	NA	-32	-1	multi-exon	FALSE	canonical	1	1	junction_14	92.7664269944912	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGCGTTTTGAAACCC	8104	False	NA	-14	True	AATAAA	-14	NA	3695811	3668790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3681608_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.8	chr7	-	4610	21	Fusion	ENSMUSG00000035596.15_ENSMUSG00000019734.17	novel	2310	15	NA	NA	-17	-2	intron_retention	FALSE	canonical	1	1	junction_13	93.7296511249242	245	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTTGCGTTTTGAAACC	7913	False	NA	-15	True	AATAAA	-13	NA	3696002	3668791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562_3679768_3681608_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ES.29895.9	chr7	-	115	1	Intergenic	novelGene_24788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAATAAATATTTAAAA	6698	False	NA	NA	False	NA	NA	NA	3670844	3670729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3670700_3670800
ES.29896.1	chr7	-	185	1	Intergenic	novelGene_24791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTCTACATGGGGACAG	8749	False	NA	NA	False	NA	NA	NA	3711633	3711448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3711400_3711600
ES.29897.1	chr7	-	3768	3	NNC	ENSMUSG00000081665.3	novel	3462	10	NA	NA	-19773	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGAGGATTCTGCATCT	NA	False	NA	NA	False	AATAAA	-17	NA	3762661	3734627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3736725_3736764_3738349_3762574
ES.29897.2	chr7	-	168	1	Intergenic	novelGene_24792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3746562	3746394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3746400_3746600
ES.29898.1	chr7	-	169	1	Intergenic	novelGene_24793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	3851716	3851547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_3851500_3851700
ES.29899.1	chr7	-	2070	9	NNC	ENSMUSG00000074417.10	novel	2128	10	NA	NA	18	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.05326872164704	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTGTGGTATTGTGAA	NA	False	NA	NA	False	AATAAA	-40	NA	3901101	3887199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_3887427_3896979_3897253_3897541_3897839_3898065_3898375_3898500_3898786_3899939_3900246_3900393_3900679_3900859_3900896_3901049
ES.299.1	chr1	+	226	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGGTTAAAAAAACAACAA	8949	False	NA	NA	False	AATAAA	-18	NA	36892246	36892472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36892200_36892500
ES.2990.1	chr10	+	178	1	Intergenic	novelGene_2330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	66800566	66800744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66800600_66800700
ES.29900.1	chr7	+	2208	1	Intergenic	novelGene_24794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4060781	4062989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4060800_4063000
ES.29901.1	chr7	+	3038	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	-42	1359	-39	2	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGAGGATAAAAACTGC	251	False	NA	NA	False	NA	NA	NA	4122489	4138348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.10	chr7	+	2582	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	22	1751	-1	8	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTTTG	315	False	NA	NA	False	GATAAA	-14	NA	4122553	4137956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.11	chr7	+	2905	14	NIC	ENSMUSG00000030428.17	novel	4355	14	NA	NA	13	-28	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	19.8255707216178	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAAACAAAAC	329	False	NA	NA	False	NA	NA	NA	4122567	4138301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4122780_4125475_4125647_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.12	chr7	+	6260	12	NIC	ENSMUSG00000030428.17	novel	1491	13	NA	NA	65	0	intron_retention	FALSE	canonical	3	27	junction_11	14.3365682812396	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGCTAGGTCCTTCT	579	False	NA	3	True	AATAAA	-18	NA	4122817	4137238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.13	chr7	+	3064	12	NNC	ENSMUSG00000030428.17	novel	2649	13	NA	NA	143	-501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.9130431047427	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGGGAAGAAACCTACC	5392	False	NA	NA	False	NA	NA	NA	4127630	4139206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4134023_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.14	chr7	+	1517	11	ISM	ENSMUSG00000030428.17	ENSMUST00000206869.2	1491	13	864	0	-314	0	3prime_fragment	FALSE	canonical	3	27	junction_10	13.9513440212762	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGCTAGGTCCTTCT	6113	False	NA	3	True	AATAAA	-18	NA	4128351	4137238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.15	chr7	+	1966	11	ISM	ENSMUSG00000030428.17	ENSMUST00000134536.8	2649	13	3333	105	-185	-28	3prime_fragment	FALSE	canonical	3	26	junction_10	14.1509716980849	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAAACAAAAC	6242	False	NA	NA	False	NA	NA	NA	4128480	4138301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.17	chr7	+	2344	10	ISM	ENSMUSG00000030428.17	ENSMUST00000206869.2	1491	13	1227	-1063	49	-28	intron_retention	FALSE	canonical	3	41	junction_6	11.0554159678513	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAAACAAAAC	6476	False	NA	NA	False	NA	NA	NA	4128714	4138301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661
ES.29901.18	chr7	+	5528	5	ISM	ENSMUSG00000030428.17	ENSMUST00000148951.8	569	6	-221	-3047	-221	-464	intron_retention	FALSE	canonical	3	41	junction_4	8.4372685153431	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATACAGAGTTATCCAAGT	1207	False	NA	NA	False	AAGAAA	-24	NA	4132023	4139243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289
ES.29901.19	chr7	+	3069	6	NIC	ENSMUSG00000030428.17	novel	1491	13	NA	NA	172	-507	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.9447389242702	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGATGGGAAGAAA	141	False	NA	NA	False	NA	NA	NA	4133789	4139200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4134165_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.2	chr7	+	2376	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	-31	167	-31	-150	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCGAGTACCTATTTG	259	False	NA	NA	False	NA	NA	NA	4122497	4138179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.3	chr7	+	2494	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	10	8	7	6	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTACATGTGAGAGGA	300	False	NA	NA	False	NA	NA	NA	4122538	4138338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.4	chr7	+	3877	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	11	467	11	-467	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATACAGAGTTATCCA	304	False	NA	NA	False	AAGAAA	-21	NA	4122542	4139240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29901.5	chr7	+	2098	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	16	398	-10	0	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTGTCTTTGTTGTTG	306	False	NA	NA	False	GATAAA	-6	NA	4122544	4137948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.6	chr7	+	3385	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	17	-890	-9	-471	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAATGATACAGAGTTA	307	False	NA	NA	False	AAGAAA	-17	NA	4122545	4139236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ES.29901.7	chr7	+	3170	14	NNC	ENSMUSG00000030428.17	novel	4355	14	NA	NA	-9	-28	intron_retention	FALSE	canonical	0	0	junction_4	22.9527428070561	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAAACAAAAC	307	False	NA	NA	False	NA	NA	NA	4122545	4138301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4130420_4130525_4131168_4131269_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661
ES.29901.8	chr7	+	3009	12	ISM	ENSMUSG00000030428.17	ENSMUST00000079415.12	2882	13	-31	31	-2	-28	intron_retention	FALSE	canonical	0	0	junction_11	19.2590002572587	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAAACAAAAC	314	False	NA	NA	False	NA	NA	NA	4122552	4138301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136661
ES.29901.9	chr7	+	1866	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	22	2467	-1	2	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTAGGTCCTTCTTA	315	False	NA	5	True	AATAAA	-20	NA	4122553	4137240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ES.29902.1	chr7	-	4958	15	Fusion	ENSMUSG00000086155.8_ENSMUSG00000055541.19	novel	2496	8	NA	NA	-4279	70	intron_retention	TRUE	canonical	0	0	junction_1	0.589015089373952	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGCATACTCAAGTGT	NA	False	NA	NA	False	AATATA	-16	NA	4128006	4012095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4012834_4013249_4013300_4013464_4013503_4013588_4013632_4013728_4013846_4014383_4014466_4031810_4032036_4058916_4058953_4066067_4066363_4068429_4068579_4075792_4076037_4076413_4078495_4079213_4079344_4104896_4105056_4127435
ES.29902.2	chr7	-	3515	5	NNC	ENSMUSG00000086155.8	novel	2122	7	NA	NA	-4661	-2	intron_retention	FALSE	canonical	0	0	junction_2	2.04633819296811	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTGTTTAAGATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	4128388	4077125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4078495_4079213_4079284_4104034_4105056_4113189_4113292_4127435
ES.29902.3	chr7	-	5015	2	NIC	ENSMUSG00000086155.8	novel	2122	7	NA	NA	22129	-3	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTGTTTAAGATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	4101314	4077126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4079284_4098456
ES.29903.1	chr7	+	3791	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-143	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	394	False	NA	20	True	ATTAAA	-20	NA	4139894	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.10	chr7	+	3555	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	131.168531263219	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	53	False	NA	12	True	ATTAAA	-12	NA	4140008	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.11	chr7	+	5191	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-29	0	intron_retention	FALSE	canonical	3	40	junction_8	108.760082546657	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	53	False	NA	16	True	ATTAAA	-16	NA	4140008	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.12	chr7	+	3695	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	105.770317197217	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	53	False	NA	14	True	ATTAAA	-14	NA	4140008	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146762_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.13	chr7	+	3177	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	110.576067332252	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	53	False	NA	11	True	ATTAAA	-11	NA	4140008	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150401
ES.29903.14	chr7	+	3208	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	110.023755010755	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	53	False	NA	20	True	ATTAAA	-20	NA	4140008	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150379
ES.29903.15	chr7	+	5160	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-27	0	intron_retention	FALSE	canonical	3	40	junction_8	117.063059929254	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	55	False	NA	16	True	ATTAAA	-16	NA	4140010	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.16	chr7	+	5267	15	NIC	ENSMUSG00000035545.14	novel	5599	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	40	junction_8	103.929528714295	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	57	False	NA	16	True	ATTAAA	-16	NA	4140012	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.18	chr7	+	5118	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-25	-4	intron_retention	FALSE	canonical	1	5	junction_13	133.025711800388	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	57	False	NA	11	True	ATTAAA	-11	NA	4140012	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147778_4147893_4147963_4148053_4148184_4148264
ES.29903.19	chr7	+	5508	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	6	junction_8	114.532597876462	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	59	False	NA	14	True	ATTAAA	-14	NA	4140014	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146762_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.2	chr7	+	5170	15	FSM	ENSMUSG00000035545.14	ENSMUST00000037472.13	5105	15	-63	-2	-53	2	multi-exon	FALSE	canonical	3	216	junction_8	58.4889663412978	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGCCTGTTTTATC	29	False	NA	22	True	ATTAAA	-22	NA	4139984	4151178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.20	chr7	+	3230	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	100.580095225425	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	60	False	NA	20	True	ATTAAA	-20	NA	4140015	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150379
ES.29903.21	chr7	+	3686	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	117.390224651587	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	60	False	NA	14	True	ATTAAA	-14	NA	4140015	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.22	chr7	+	5514	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-22	0	intron_retention	FALSE	canonical	3	249	junction_1	49.7978160686501	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	60	False	NA	16	True	ATTAAA	-16	NA	4140015	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.23	chr7	+	3411	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	113.393631018482	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	60	False	NA	12	True	ATTAAA	-12	NA	4140015	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146639_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.24	chr7	+	5314	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-19	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	115.734801933983	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	63	False	NA	13	True	ATTAAA	-13	NA	4140018	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.25	chr7	+	5102	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_8	111.716295195665	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	70	False	NA	14	True	ATTAAA	-14	NA	4140025	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146047_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.26	chr7	+	5008	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-11	-2	intron_retention	FALSE	canonical	2	6	junction_4	106.113983596852	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	71	False	NA	13	True	ATTAAA	-13	NA	4140026	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.27	chr7	+	3544	15	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	108.968657729399	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	71	False	NA	16	True	ATTAAA	-16	NA	4140026	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.29	chr7	+	5388	13	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	6	junction_4	106.002227439909	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	73	False	NA	14	True	ATTAAA	-14	NA	4140028	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.3	chr7	+	3672	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_1	83.8505548911607	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	29	False	NA	20	True	ATTAAA	-20	NA	4139984	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.30	chr7	+	3920	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	74	junction_8	90.4913992229832	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	73	False	NA	11	True	ATTAAA	-11	NA	4140028	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.31	chr7	+	5276	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_14	101.173018101847	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	79	False	NA	14	True	ATTAAA	-14	NA	4140034	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4149723_4149939
ES.29903.32	chr7	+	5353	13	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	6	junction_4	118.221778403511	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	79	False	NA	14	True	ATTAAA	-14	NA	4140034	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.33	chr7	+	2709	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	110.576067332252	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCCTGTTTTAT	81	False	NA	21	True	ATTAAA	-21	NA	4140036	4151177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148681_4151059
ES.29903.34	chr7	+	5576	13	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-1	2	intron_retention	FALSE	canonical	3	249	junction_1	46.5071679063203	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGCTTGGCCTGTTT	81	False	NA	18	True	ATTAAA	-18	NA	4140036	4151174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147963_4148053_4148184_4148264
ES.29903.35	chr7	+	3410	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	126.93094517788	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	81	False	NA	11	True	ATTAAA	-11	NA	4140036	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.36	chr7	+	5326	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	104.905085306085	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	81	False	NA	14	True	ATTAAA	-14	NA	4140036	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.37	chr7	+	3933	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-1	-1214	intron_retention	FALSE	canonical	0	0	junction_1	132.752635462435	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCCTACCTGCAGGCCG	81	False	NA	NA	False	NA	NA	NA	4140036	4149957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141709_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.38	chr7	+	3708	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	123.733521630155	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	81	False	NA	16	True	ATTAAA	-16	NA	4140036	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149659_4149723_4149939
ES.29903.39	chr7	+	4906	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_9	120.298406750325	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	81	False	NA	11	True	ATTAAA	-11	NA	4140036	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.4	chr7	+	8684	11	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-35	0	intron_retention	FALSE	canonical	3	258	junction_2	44.6591535969951	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	47	False	NA	20	True	ATTAAA	-20	NA	4140002	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4142590_4142934_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.40	chr7	+	5152	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	150.457288143697	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	82	False	NA	20	True	ATTAAA	-20	NA	4140037	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144129_4145030_4145288_4145509_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.41	chr7	+	3586	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	106.861571930959	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	82	False	NA	12	True	ATTAAA	-12	NA	4140037	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145268_4145533_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.42	chr7	+	5267	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	-3	intron_retention	FALSE	canonical	2	6	junction_4	122.258480665656	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	83	False	NA	12	True	ATTAAA	-12	NA	4140038	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.43	chr7	+	5180	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-3	intron_retention	FALSE	canonical	3	6	junction_10	131.744635142722	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	84	False	NA	12	True	ATTAAA	-12	NA	4140039	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146762_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.44	chr7	+	3651	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	131.610442571059	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	85	False	NA	14	True	ATTAAA	-14	NA	4140040	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147803_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.45	chr7	+	3716	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	130.433876327241	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	85	False	NA	16	True	ATTAAA	-16	NA	4140040	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146762_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.47	chr7	+	858	4	ISM	ENSMUSG00000035545.14	ENSMUST00000128756.8	720	6	7	1732	-3	-1	5prime_fragment	FALSE	canonical	3	127	junction_1	120.070349749174	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGAGTCACGGTTCT	89	False	NA	NA	False	ATTAAA	-18	NA	4140044	4143450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934
ES.29903.48	chr7	+	4010	15	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	173	junction_14	65.4541824484884	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAACCTGTTTCTGCT	89	False	NA	8	True	ATTAAA	-8	NA	4140044	4151164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.49	chr7	+	6804	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	40	junction_7	93.2491731010183	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	89	False	NA	12	True	ATTAAA	-12	NA	4140044	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.5	chr7	+	5120	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-34	0	intron_retention	FALSE	canonical	3	127	junction_1	77.0351099386851	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	48	False	NA	20	True	ATTAAA	-20	NA	4140003	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.50	chr7	+	3224	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	128.933546352375	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	89	False	NA	14	True	ATTAAA	-14	NA	4140044	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150401
ES.29903.52	chr7	+	3538	15	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-3	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	108.223785533043	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAACCTGTTTCTGCTTG	89	False	NA	10	True	ATTAAA	-10	NA	4140044	4151166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.53	chr7	+	3650	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	105.688767404846	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	89	False	NA	14	True	ATTAAA	-14	NA	4140044	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148249_4148473_4149939
ES.29903.54	chr7	+	3641	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	104.494635694321	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	90	False	NA	11	True	ATTAAA	-11	NA	4140045	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146047_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.55	chr7	+	4998	15	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	155.545862388308	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	90	False	NA	15	True	ATTAAA	-15	NA	4140045	4151171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141709_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.56	chr7	+	8086	11	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	258	junction_3	39.3122118431411	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	90	False	NA	14	True	ATTAAA	-14	NA	4140045	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4141788_4142417_4142590_4142934_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147963_4148053_4148184_4148264
ES.29903.57	chr7	+	2943	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	101.200043917426	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	93	False	NA	14	True	ATTAAA	-14	NA	4140048	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150627
ES.29903.58	chr7	+	5258	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	40	junction_8	92.233399590387	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	93	False	NA	14	True	ATTAAA	-14	NA	4140048	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.59	chr7	+	4958	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	5	junction_11	130.438813332798	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	93	False	NA	20	True	ATTAAA	-20	NA	4140048	4151176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147778_4147893_4147963_4148053_4148184_4148264
ES.29903.6	chr7	+	6390	13	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	127	junction_1	72.4212215675304	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	51	False	NA	14	True	ATTAAA	-14	NA	4140006	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.60	chr7	+	5370	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	74	junction_8	84.8778233578076	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	93	False	NA	14	True	ATTAAA	-14	NA	4140048	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.61	chr7	+	3349	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	112.505920831849	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	93	False	NA	13	True	ATTAAA	-13	NA	4140048	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.62	chr7	+	5502	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	6	junction_8	103.521486778601	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	93	False	NA	13	True	ATTAAA	-13	NA	4140048	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146762_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.63	chr7	+	4822	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_8	110.720483697481	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTGGCCTGTTTT	93	False	NA	19	True	ATTAAA	-19	NA	4140048	4151175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.65	chr7	+	3441	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	126.93094517788	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	93	False	NA	12	True	ATTAAA	-12	NA	4140048	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146627_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.66	chr7	+	3466	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	106.861571930959	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	93	False	NA	14	True	ATTAAA	-14	NA	4140048	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.67	chr7	+	3747	18	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	142.050846201543	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	93	False	NA	16	True	ATTAAA	-16	NA	4140048	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149659_4149723_4149939
ES.29903.69	chr7	+	2619	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	111.800446527507	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	96	False	NA	14	True	ATTAAA	-14	NA	4140051	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939_4150065_4151044
ES.29903.7	chr7	+	5499	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-30	2	intron_retention	FALSE	canonical	3	127	junction_1	73.1737819636508	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGCCTGTTTTATC	52	False	NA	22	True	ATTAAA	-22	NA	4140007	4151178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.70	chr7	+	5463	14	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_12	102.042687436051	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	96	False	NA	13	True	ATTAAA	-13	NA	4140051	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147975_4148077_4148184_4148264
ES.29903.72	chr7	+	4612	11	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	117.026706353721	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	97	False	NA	16	True	ATTAAA	-16	NA	4140052	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.73	chr7	+	3877	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	110.207602076969	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	98	False	NA	14	True	ATTAAA	-14	NA	4140053	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149659
ES.29903.74	chr7	+	4882	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_8	101.173018101847	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGCTTGGCCTGTTT	103	False	NA	18	True	ATTAAA	-18	NA	4140058	4151174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146627_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.75	chr7	+	3673	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.658590205881	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGTTTCTGCTTGG	105	False	NA	11	True	ATTAAA	-11	NA	4140060	4151167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140157_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.79	chr7	+	3837	15	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	107.945588145139	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	105	False	NA	16	True	ATTAAA	-16	NA	4140060	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.8	chr7	+	3725	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	110.212560961762	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	52	False	NA	16	True	ATTAAA	-16	NA	4140007	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.80	chr7	+	3367	16	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	103.50446045139	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.81	chr7	+	5244	17	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-2	intron_retention	FALSE	canonical	1	3	junction_4	144.832648576728	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	105	False	NA	13	True	ATTAAA	-13	NA	4140060	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4143268_4143377_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.82	chr7	+	3225	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	128.515912803629	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGAACCTGTTTCTGCTT	105	False	NA	9	True	ATTAAA	-9	NA	4140060	4151165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4150379
ES.29903.83	chr7	+	4833	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-2	intron_retention	FALSE	canonical	2	5	junction_8	100.041241495695	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTCTGCTTGGCC	105	False	NA	13	True	ATTAAA	-13	NA	4140060	4151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.84	chr7	+	5519	13	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	127	junction_1	71.6941807649377	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147963_4148053_4148184_4148264
ES.29903.85	chr7	+	4995	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	2	0	intron_retention	FALSE	canonical	1	3	junction_1	105.643477691234	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	105	False	NA	16	True	ATTAAA	-16	NA	4140060	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140151_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.86	chr7	+	8095	10	NIC	ENSMUSG00000035545.14	novel	5599	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	258	junction_3	43.1560475998955	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	105	False	NA	14	True	ATTAAA	-14	NA	4140060	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147963_4148053_4148184_4148264
ES.29903.87	chr7	+	4967	16	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	132.548590671078	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	112	False	NA	16	True	ATTAAA	-16	NA	4140067	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145137_4145513_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.88	chr7	+	7335	11	NIC	ENSMUSG00000035545.14	novel	5599	14	NA	NA	110	0	intron_retention	FALSE	canonical	3	258	junction_4	41.2456058265605	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	237	False	NA	16	True	ATTAAA	-16	NA	4140192	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147963_4148053_4148184_4148264
ES.29903.89	chr7	+	3715	15	NIC	ENSMUSG00000035545.14	novel	502	5	NA	NA	237	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	133.359725279151	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACCTGTTTCTGCTTGGC	364	False	NA	12	True	ATTAAA	-12	NA	4140319	4151168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.9	chr7	+	5074	15	NNC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	-29	-1	intron_retention	FALSE	canonical	1	5	junction_12	108.901963963475	742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	53	False	NA	14	True	ATTAAA	-14	NA	4140008	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147778_4147893_4147963_4148053_4148184_4148264
ES.29903.90	chr7	+	5675	14	NIC	ENSMUSG00000035545.14	novel	502	5	NA	NA	238	-1	intron_retention	FALSE	canonical	3	8	junction_1	100.968681066027	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	365	False	NA	14	True	ATTAAA	-14	NA	4140320	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.91	chr7	+	3876	17	NNC	ENSMUSG00000035545.14	novel	502	5	NA	NA	-238	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	130.592340414743	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	367	False	NA	14	True	ATTAAA	-14	NA	4140322	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.92	chr7	+	5060	16	NNC	ENSMUSG00000035545.14	novel	502	5	NA	NA	-207	-1	intron_retention	FALSE	canonical	0	0	junction_9	140.718000112123	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	398	False	NA	14	True	ATTAAA	-14	NA	4140353	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146669_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.93	chr7	+	3791	16	NIC	ENSMUSG00000035545.14	novel	502	5	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	104.571379130876	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	403	False	NA	16	True	ATTAAA	-16	NA	4140358	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ES.29903.94	chr7	+	5251	15	NIC	ENSMUSG00000035545.14	novel	502	5	NA	NA	-197	-1	intron_retention	FALSE	canonical	3	8	junction_1	101.430910435807	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	408	False	NA	14	True	ATTAAA	-14	NA	4140363	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ES.29903.95	chr7	+	2851	2	NNC	ENSMUSG00000035545.14	novel	5599	14	NA	NA	832	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	3890	False	NA	14	True	ATTAAA	-14	NA	4145989	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4146244_4148573
ES.29903.96	chr7	+	4270	5	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	1110	0	intron_retention	FALSE	canonical	3	334	junction_1	28.1646942110153	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTCTGCTTGGCCTGT	4168	False	NA	16	True	ATTAAA	-16	NA	4146267	4151172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4146697_4146786_4147338_4147710_4147963_4148053_4148184_4148264
ES.29903.97	chr7	+	4402	4	NIC	ENSMUSG00000035545.14	novel	5599	14	NA	NA	-1255	-1	intron_retention	FALSE	canonical	3	334	junction_1	29.8775277870621	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTCTGCTTGGCCT	4364	False	NA	14	True	ATTAAA	-14	NA	4146463	4151170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4146697_4146786_4146928_4147051_4147963_4148053
ES.29904.1	chr7	+	177	1	Intergenic	novelGene_24795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGCAGCTAAAAAAA	NA	False	NA	4	True	NA	NA	NA	4164812	4164989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4164800_4165000
ES.29905.1	chr7	-	2334	3	FSM	ENSMUSG00000063838.7_ENSMUSG00000043432.8	ENSMUST00000076831.7	1025	3	157	-1466	157	1466	multi-exon	FALSE	canonical	3	137	junction_2	5.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGACGCCCTGCCT	NA	False	NA	NA	False	AATAAA	-34	NA	4167702	4152792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4154787_4167091_4167187_4167457
ES.29905.2	chr7	-	880	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	141	4	141	-4	multi-exon	FALSE	canonical	3	137	junction_2	5.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTGTCTATTCACTTT	NA	False	NA	-3	True	CATAAA	-18	NA	4167718	4154262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4154787_4167091_4167187_4167457
ES.29905.4	chr7	-	2352	1	NIC	ENSMUSG00000063838.7	novel	1025	3	NA	NA	5	-10407	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	4167533	4165181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4165200_4167500
ES.29906.1	chr7	+	173	1	Intergenic	novelGene_24796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAAATCAGCAT	7047	False	NA	NA	False	NA	NA	NA	4177986	4178159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4178000_4178200
ES.29907.1	chr7	-	177	1	Intergenic	novelGene_24797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATAAAGGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	4212576	4212399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4212400_4212600
ES.29908.1	chr7	+	177	1	Intergenic	novelGene_24798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4223582	4223759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4223600_4223800
ES.29909.1	chr7	+	1931	5	NNC	ENSMUSG00000070873.6	novel	2109	6	NA	NA	-81	232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGGTTCGTGCTGACTG	2966	False	NA	NA	False	AATATA	-27	NA	4240671	4246694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4240791_4240941_4240978_4241557_4241658_4244891_4244943_4245069
ES.2991.1	chr10	-	1119	2	Intergenic	novelGene_2331	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGACTTTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	66810466	66805487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66806523_66810382
ES.29910.1	chr7	+	6913	2	Intergenic	novelGene_24799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	4307299	4314257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4312773_4312817
ES.29910.2	chr7	+	3343	1	Intergenic	novelGene_24800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCAGAACGGTTTCCG	NA	False	NA	NA	False	NA	NA	NA	4310907	4314250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4310900_4314200
ES.29911.1	chr7	+	175	1	Intergenic	novelGene_24801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCTGGAGCAAGCAGCAA	NA	False	NA	NA	False	NA	NA	NA	4410921	4411096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4410900_4411100
ES.29912.1	chr7	+	3729	2	Antisense	novelGene_ENSMUSG00000008435.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTGGATTTTTGACAC	NA	False	NA	NA	False	NA	NA	NA	4437101	4441082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4440412_4440663
ES.29912.2	chr7	+	189	1	Intergenic	novelGene_24802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAACCA	NA	False	NA	NA	False	NA	NA	NA	4440415	4440604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4440400_4440600
ES.29913.1	chr7	-	2926	6	ISM	ENSMUSG00000008435.16	ENSMUST00000119485.8	2119	7	-44	896	-3	1	5prime_fragment	FALSE	canonical	2	7	junction_3	10.0279609093773	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCATTGTCCTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	4448644	4428664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4447201_4447321_4448445
ES.29913.10	chr7	-	3759	1	NIC	ENSMUSG00000008435.16	novel	2119	7	NA	NA	15754	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATTTGTCATTGTCCT	NA	False	NA	-4	True	AATAAA	-20	NA	4432426	4428667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4428700_4432400
ES.29913.11	chr7	-	2691	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	2	341	2	-341	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAGTGTATATGTACA	NA	False	NA	NA	False	AATAAA	-14	NA	4448646	4429006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ES.29913.2	chr7	-	3035	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	0	-1	0	1	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCATTGTCCTTTT	NA	False	NA	-1	True	AATAAA	-23	NA	4448648	4428664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ES.29913.3	chr7	-	3508	8	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_6	10.5133539959852	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448619	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4446735_4446771_4447201_4447321_4447976
ES.29913.4	chr7	-	4057	5	ISM	ENSMUSG00000008435.16	ENSMUST00000119485.8	2119	7	-52	898	-4	-1	intron_retention	FALSE	canonical	2	7	junction_3	11.0679718105893	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448652	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4447201
ES.29913.5	chr7	-	2960	7	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	10	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448645	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4446735_4446771_4447201_4447321_4448445
ES.29913.6	chr7	-	3036	8	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	9.2493794607078	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448616	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4446735_4446771_4447201_4447321_4448445
ES.29913.7	chr7	-	3038	7	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	9.45163125250522	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448620	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448412
ES.29913.8	chr7	-	2873	7	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	161	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	10.6874796945876	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448019	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4447976
ES.29913.9	chr7	-	3215	8	NNC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	10.279760181432	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	4448645	4428666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4446735_4446771_4447201_4447321_4447976_4448199_4448412
ES.29914.1	chr7	+	2738	21	NNC	ENSMUSG00000006154.14	novel	676	4	NA	NA	-7795	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.3	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCACCTGCTGTCCCC	NA	False	NA	NA	False	TATAAA	-17	NA	4455877	4482236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4455928_4457189_4457380_4468357_4468412_4471852_4471894_4472194_4472254_4472879_4473042_4473281_4473432_4473806_4473890_4474225_4474488_4474794_4474922_4475111_4475201_4475297_4475373_4475473_4475623_4476929_4477072_4477183_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481839
ES.29914.2	chr7	+	1833	2	ISM	ENSMUSG00000006154.14	ENSMUST00000164987.2	676	4	890	-1233	890	-10	3prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCCTGACTTCATGCTT	771	False	NA	NA	False	NA	NA	NA	4481554	4483476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4481751_4481839
ES.29915.1	chr7	-	3517	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	-530	-4	-530	4	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCCTGATTGTGGG	9411	False	NA	1	True	AATAAA	-21	NA	4505209	4484514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.10	chr7	-	3123	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-38	1	intron_retention	FALSE	canonical	3	198	junction_15	26.127763011785	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTCTCCTGATTGT	9903	False	NA	-2	True	AATAAA	-18	NA	4504717	4484517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.12	chr7	-	4081	19	NIC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	46	junction_7	55.578772926361	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9927	False	NA	-3	True	AATAAA	-17	NA	4504693	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.14	chr7	-	3069	21	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	63.4557129027797	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9954	False	NA	-3	True	AATAAA	-17	NA	4504666	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489676_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.15	chr7	-	3966	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	232	junction_7	21.4275820903392	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9938	False	NA	-3	True	AATAAA	-17	NA	4504682	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.16	chr7	-	4922	14	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	238	junction_8	19.7406258181525	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9961	False	NA	-3	True	AATAAA	-17	NA	4504659	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.17	chr7	-	3954	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	232	junction_6	21.3944617060058	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9943	False	NA	-3	True	AATAAA	-17	NA	4504677	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.18	chr7	-	3006	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	62.1848243621575	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9903	False	NA	-3	True	AATAAA	-17	NA	4504717	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488202_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.19	chr7	-	4150	18	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	232	junction_7	21.1833322216747	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9959	False	NA	-3	True	AATAAA	-17	NA	4504661	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487771_4488009_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.2	chr7	-	7998	12	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	3	intron_retention	FALSE	canonical	3	251	junction_8	17.9802462774665	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTCCTGATTGTGG	9931	False	NA	0	True	AATAAA	-20	NA	4504689	4484515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4486401_4486472_4487072_4487448_4487517_4487617_4489432_4489509_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.20	chr7	-	2941	18	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	intron_retention	FALSE	canonical	2	13	junction_17	66.2583806803383	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9938	False	NA	-3	True	AATAAA	-17	NA	4504682	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4504264
ES.29915.21	chr7	-	3058	22	NNC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.9489154164001	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9942	False	NA	-3	True	AATAAA	-17	NA	4504678	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485449_4485576_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489309_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.22	chr7	-	3100	21	NIC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_6	54.5631743944577	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9905	False	NA	-3	True	AATAAA	-17	NA	4504715	4484518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.23	chr7	-	2597	9	NNC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_8	94.4639481495454	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	NA	False	NA	-4	True	AATAAA	-16	NA	4488315	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4488084_4488202
ES.29915.24	chr7	-	1267	4	NIC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-500	-1	intron_retention	FALSE	canonical	3	289	junction_1	5.35412613473634	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	NA	False	NA	-4	True	AATAAA	-16	NA	4486133	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485287_4485377_4485429_4485582_4485688_4485789
ES.29915.27	chr7	-	2471	19	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	4116	-1	intron_retention	FALSE	canonical	1	1	junction_17	66.9487550479405	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9825	False	NA	-4	True	AATAAA	-16	NA	4500244	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488316_4488387_4488462_4489356_4489432_4489509_4489676_4492731_4492892_4500215
ES.29915.28	chr7	-	3012	22	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	60.8223687817047	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9931	False	NA	-4	True	AATAAA	-16	NA	4504689	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485449_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.29	chr7	-	2854	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_20	63.3904369759351	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9938	False	NA	-4	True	AATAAA	-16	NA	4504682	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4504264
ES.29915.3	chr7	-	3057	21	NNC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-7	3	intron_retention	FALSE	canonical	1	2	junction_12	77.9753005765287	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTCCTGATTGTGG	9950	False	NA	0	True	AATAAA	-20	NA	4504670	4484515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487512_4487613_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.30	chr7	-	2929	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	61.8695137745067	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9943	False	NA	-4	True	AATAAA	-16	NA	4504677	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487021_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.31	chr7	-	3542	17	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	26	-1	intron_retention	FALSE	canonical	3	198	junction_11	26.3720377483425	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9983	False	NA	-4	True	AATAAA	-16	NA	4504637	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.32	chr7	-	3070	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	198	junction_15	26.2200305110425	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9938	False	NA	-4	True	AATAAA	-16	NA	4504682	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.33	chr7	-	2961	22	NNC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	76.3909861596243	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9962	False	NA	-4	True	AATAAA	-16	NA	4504658	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487065_4487444_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.34	chr7	-	3992	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	232	junction_7	21.3623273655029	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9927	False	NA	-4	True	AATAAA	-16	NA	4504693	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.35	chr7	-	2493	16	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.3692744346847	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	NA	False	NA	-4	True	AATAAA	-16	NA	4488994	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485711_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387
ES.29915.36	chr7	-	3005	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	62.1173273594143	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9939	False	NA	-4	True	AATAAA	-16	NA	4504681	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489676_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.38	chr7	-	4100	18	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	232	junction_7	20.4370922707813	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9953	False	NA	-4	True	AATAAA	-16	NA	4504667	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.39	chr7	-	2865	21	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	63.5588506818681	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9939	False	NA	-4	True	AATAAA	-16	NA	4504681	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487021_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.40	chr7	-	3037	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	198	junction_15	25.3665133591513	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9958	False	NA	-4	True	AATAAA	-16	NA	4504662	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.41	chr7	-	3053	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	60.9648424761402	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGTCTCCTGATT	9939	False	NA	-4	True	AATAAA	-16	NA	4504681	4484519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488484_4489309_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.42	chr7	-	2424	16	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	94.7190934641304	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACTTTGTCTCCTGAT	NA	False	NA	-5	True	AATAAA	-15	NA	4488948	4484520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485449_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488206_4488316_4488387
ES.29915.45	chr7	-	3980	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-27	0	intron_retention	FALSE	canonical	3	232	junction_7	20.9165337721514	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9914	False	NA	-6	True	AATAAA	-14	NA	4504706	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.47	chr7	-	2583	15	NNC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	73.9588964719386	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	NA	False	NA	-6	True	AATAAA	-14	NA	4488948	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486095_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387
ES.29915.48	chr7	-	3278	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-6	0	intron_retention	FALSE	canonical	3	198	junction_14	26.8838684394837	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9935	False	NA	-6	True	AATAAA	-14	NA	4504685	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.49	chr7	-	4035	19	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	0	intron_retention	FALSE	canonical	3	232	junction_7	19.8656754662004	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9931	False	NA	-6	True	AATAAA	-14	NA	4504689	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.5	chr7	-	3910	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-30	2	intron_retention	FALSE	canonical	3	232	junction_7	20.8868379607829	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTCTCCTGATTGTG	9911	False	NA	-1	True	AATAAA	-19	NA	4504709	4484516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.50	chr7	-	3622	19	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	3	0	intron_retention	FALSE	canonical	2	13	junction_18	63.2229300878162	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9944	False	NA	-6	True	AATAAA	-14	NA	4504676	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4504264
ES.29915.51	chr7	-	3127	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	62.4662085521793	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9936	False	NA	-6	True	AATAAA	-14	NA	4504684	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487913_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.52	chr7	-	4174	18	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_5	66.6582462963732	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9925	False	NA	-6	True	AATAAA	-14	NA	4504695	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.53	chr7	-	3028	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	60.1627045636095	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9940	False	NA	-6	True	AATAAA	-14	NA	4504680	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489309_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.54	chr7	-	3832	19	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-3	0	intron_retention	FALSE	canonical	1	3	junction_18	65.2961203543774	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9938	False	NA	-6	True	AATAAA	-14	NA	4504682	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4504264
ES.29915.55	chr7	-	3886	21	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_7	83.8048178805968	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9949	False	NA	-6	True	AATAAA	-14	NA	4504671	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486183_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489676_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.56	chr7	-	3138	21	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_9	83.9143015224461	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9931	False	NA	-6	True	AATAAA	-14	NA	4504689	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486640_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488484_4489309_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.58	chr7	-	3342	18	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	4120	0	intron_retention	FALSE	non_canonical	0	0	junction_15	67.759752678452	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9829	False	NA	-6	True	AATAAA	-14	NA	4500240	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488316_4488387_4489432_4489506_4489655_4492731_4492892_4500215
ES.29915.59	chr7	-	4037	19	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	232	junction_7	21.4378947971421	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9958	False	NA	-6	True	AATAAA	-14	NA	4504662	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4488084_4488187_4488316_4488387_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.60	chr7	-	3645	18	NIC	ENSMUSG00000019254.17	novel	2667	22	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	66.7054673708432	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9938	False	NA	-6	True	AATAAA	-14	NA	4504682	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.61	chr7	-	4032	17	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_7	93.1456352976349	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGACTTTGTCTCCTGA	9928	False	NA	-6	True	AATAAA	-14	NA	4504692	4484521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486183_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4504264
ES.29915.62	chr7	-	3194	20	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	5	junction_14	63.0149259019369	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGACTTTGTCTCCT	9935	False	NA	-8	True	AATAAA	-12	NA	4504685	4484523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489309_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.65	chr7	-	1416	4	FSM	ENSMUSG00000019254.17	ENSMUST00000145689.7	1370	4	-46	0	-30	0	multi-exon	FALSE	canonical	3	253	junction_2	4.92160768674447	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGCGTCTGGCTAATGA	9911	False	NA	NA	False	NA	NA	NA	4504709	4492170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.66	chr7	-	992	4	FSM	ENSMUSG00000019254.17	ENSMUST00000145689.7	1370	4	-24	402	-8	237	multi-exon	FALSE	canonical	3	253	junction_2	4.92160768674447	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGTAAGGCGGATCAAT	9933	False	NA	NA	False	NA	NA	NA	4504687	4492572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.67	chr7	-	7164	1	Genic_Genomic	ENSMUSG00000019254.17	novel	NA	NA	NA	NA	-1	-4707	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTAATGCTTATTATCTTA	9940	False	NA	NA	False	NA	NA	NA	4504680	4497516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_4497500_4504700
ES.29915.7	chr7	-	3947	20	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_13	64.0758293848573	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTCTCCTGATTGT	9939	False	NA	-2	True	AATAAA	-18	NA	4504681	4484517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488206_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.8	chr7	-	3817	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_5	63.2231242102369	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTCTCCTGATTGT	9962	False	NA	-2	True	AATAAA	-18	NA	4504658	4484517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ES.29915.9	chr7	-	2453	9	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	245	1	intron_retention	FALSE	canonical	3	232	junction_5	23.0078111735993	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTCTCCTGATTGT	NA	False	NA	-2	True	AATAAA	-18	NA	4488068	4484517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4486185_4486339_4486401_4486472_4486733_4486939_4487771_4488009
ES.29916.1	chr7	+	200	1	Intergenic	novelGene_24803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGCCAATAAATAAA	9034	False	NA	NA	False	ATTAAA	-6	NA	4509959	4510159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4510000_4510200
ES.29917.1	chr7	-	667	5	NNC	ENSMUSG00000064179.14	novel	485	4	NA	NA	-45	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	23.1354706025185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGTACAACTTGTCTAGA	7285	False	NA	88	True	ATTAAA	-21	NA	4511069	4507562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4507800_4510381_4510423_4510520_4510612_4510686_4510780_4510864
ES.29917.2	chr7	-	787	4	FSM	ENSMUSG00000064179.14	ENSMUST00000086502.5	485	4	-86	-216	-86	0	multi-exon	FALSE	canonical	3	16	junction_3	18.0800688297608	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGGGAGTACAACTTG	7244	False	NA	82	True	ATTAAA	-15	NA	4511110	4507568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4510686
ES.29917.3	chr7	-	646	7	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4345	-94	-85	2	3prime_fragment	TRUE	canonical	3	24	junction_6	12.1849178176228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCAGGGTTGTTAT	9800	False	NA	-9	True	AATAAA	-21	NA	4513022	4507659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950
ES.29918.1	chr7	-	162	1	Intergenic	novelGene_24804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAATAAATAAAAAAAT	7477	False	NA	NA	False	NA	NA	NA	4520678	4520516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4520500_4520700
ES.29919.1	chr7	-	3318	16	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	1524	0	intron_retention	FALSE	canonical	0	0	junction_6	7.72585845643634	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	NA	False	NA	-2	True	AATAAA	-17	NA	4533928	4521303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525044_4525082_4525303_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772
ES.29919.10	chr7	-	3371	17	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	18	1	intron_retention	FALSE	non_canonical	0	0	junction_6	9.15982225537155	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	NA	False	NA	-4	True	AATAAA	-15	NA	4535434	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4535185_4535275_4535376
ES.29919.11	chr7	-	1744	7	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	912	8	NA	NA	-346	1	intron_retention	FALSE	canonical	0	0	junction_3	10.1612007164508	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	6305	False	NA	-4	True	AATAAA	-15	NA	4526139	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523582_4523961_4524094_4524343_4524386_4524814_4525082_4525303
ES.29919.12	chr7	-	5050	14	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	6	1	intron_retention	FALSE	non_canonical	0	0	junction_6	8.99111987943607	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	NA	False	NA	-4	True	AATAAA	-15	NA	4535446	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4531110_4533772_4534880_4535185_4535275_4535376
ES.29919.13	chr7	-	5408	9	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	912	8	NA	NA	921	0	intron_retention	FALSE	canonical	0	0	junction_3	9.98749217771909	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAACTGTGTGTCTGCT	NA	False	NA	-5	True	AATAAA	-14	NA	4534531	4521306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523582_4523961_4524094_4524343_4525082_4525303_4527255_4529412_4529531_4529865_4531110_4533772
ES.29919.14	chr7	-	2240	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	-16	0	-16	0	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTCTCCAGTGCCAAGA	NA	False	NA	1	True	AATAAA	-35	NA	4535468	4525931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
ES.29919.15	chr7	-	2275	12	NNC	ENSMUSG00000055809.8	novel	2224	12	NA	NA	1	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.92318493436397	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCCTGTCCTCAGTC	NA	False	NA	-16	True	AATAAA	-18	NA	4535451	4525948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533936_4534736_4534880_4535185_4535275_4535376
ES.29919.18	chr7	-	1734	8	NNC	ENSMUSG00000055809.8	novel	2224	12	NA	NA	4384	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.32628499654255	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTCCTGTCCT	1376	False	NA	-21	True	AATAAA	-13	NA	4531068	4525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4526834_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951
ES.29919.19	chr7	-	3209	10	NIC	ENSMUSG00000055809.8	novel	2224	12	NA	NA	-6	-22	intron_retention	FALSE	canonical	3	9	junction_8	6.41371986207192	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTGTCCTGTCCT	NA	False	NA	-21	True	AATAAA	-13	NA	4535458	4525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4526859_4526936_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4534880_4535185_4535275_4535376
ES.29919.2	chr7	-	4375	16	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	11	0	intron_retention	FALSE	canonical	2	8	junction_13	6.46494822528035	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	NA	False	NA	-2	True	AATAAA	-17	NA	4535441	4521303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4525082_4525303_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
ES.29919.4	chr7	-	2733	19	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	-3	1	multi-exon	FALSE	non_canonical	0	0	junction_6	9.85199108784928	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	NA	False	NA	-4	True	AATAAA	-15	NA	4535455	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4525441_4526344_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534634_4534880_4535185_4535275_4535376
ES.29919.5	chr7	-	1034	8	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	912	8	NA	NA	-585	1	multi-exon	FALSE	non_canonical	0	0	junction_6	12.0203908388358	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	6066	False	NA	-4	True	AATAAA	-15	NA	4526378	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4525441_4526161
ES.29919.6	chr7	-	3458	17	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	2224	12	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_6	10.2347447452294	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	NA	False	NA	-4	True	AATAAA	-15	NA	4535451	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4526859_4526936_4527028_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535376
ES.29919.7	chr7	-	2810	9	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	912	8	NA	NA	-2268	1	intron_retention	FALSE	canonical	3	20	junction_3	4.76313972081441	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	2948	False	NA	-4	True	AATAAA	-15	NA	4529496	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4525082_4525303_4526859_4526936_4527255_4529412
ES.29919.8	chr7	-	1172	9	Fusion	ENSMUSG00000035458.16_ENSMUSG00000055809.8	novel	912	8	NA	NA	-554	1	multi-exon	FALSE	non_canonical	0	0	junction_6	12.6138564681861	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTGTGTGTCTGCTA	4662	False	NA	-4	True	AATAAA	-15	NA	4527782	4521305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525296_4525441_4527142_4527255_4527539
ES.2992.1	chr10	-	158	1	Intergenic	novelGene_2332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	66832764	66832606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66832600_66832800
ES.29920.1	chr7	+	177	1	Intergenic	novelGene_24805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	4628612	4628789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4628600_4628800
ES.29921.1	chr7	+	3538	2	Antisense	novelGene_ENSMUSG00000052296.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAATTATAACCCATTA	NA	False	NA	NA	False	NA	NA	NA	4637513	4641130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4639137_4639215
ES.29922.1	chr7	-	3027	1	Genic_Genomic	ENSMUSG00000045282.8	novel	NA	NA	NA	NA	189	1068	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATGTATTCGAGTAAT	2380	False	NA	NA	False	NA	NA	NA	4632997	4629970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_4630000_4633000
ES.29922.10	chr7	-	4149	30	Fusion	ENSMUSG00000063802.6_ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	1	657	multi-exon	FALSE	canonical	1	5	junction_23	124.568114780534	746	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4687979	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.101	chr7	-	3781	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCCTGCTGTGGGAC	NA	False	NA	-8	True	AATAAA	-12	NA	4661987	4634498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634906_4634950_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.103	chr7	-	3731	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.1262134845796	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCCTGCTGTGGGAC	NA	False	NA	-8	True	AATAAA	-12	NA	4661987	4634498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634890_4634933_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.104	chr7	-	3804	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	11	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	88.1854107359413	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCCTGCTGTGGGAC	NA	False	NA	-8	True	AATAAA	-12	NA	4662007	4634498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634939_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636465_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.107	chr7	-	4365	31	Fusion	ENSMUSG00000063802.6_ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-5	multi-exon	TRUE	non_canonical	0	0	junction_1	129.389459471095	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCCTGCTGTGGGAC	NA	False	NA	-8	True	AATAAA	-12	NA	4687978	4634498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634913_4634957_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
ES.29922.109	chr7	-	3742	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-10	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	85.1262134845796	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTCCTGCTGTGGGAC	NA	False	NA	-8	True	AATAAA	-12	NA	4661999	4634498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634884_4634928_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.12	chr7	-	4474	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-1	657	multi-exon	TRUE	non_canonical	0	0	junction_1	67.2624936763093	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662019	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.121	chr7	-	3861	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	90.2502925862806	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTCCTGCTGTGGGA	NA	False	NA	-9	True	AATAAA	-11	NA	4661991	4634499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639131_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.124	chr7	-	4025	22	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	94.728996439527	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTCCTGCTGTGGGA	NA	False	NA	-9	True	AATAAA	-11	NA	4661987	4634499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634925_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645037_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.126	chr7	-	3904	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	11	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_23	99.1169255503597	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAACATTCCTGCTGTGG	NA	False	NA	-11	True	AATAAA	-9	NA	4662007	4634501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.127	chr7	-	3821	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	68.7079515681821	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAACATTCCTGCTGTGG	NA	False	NA	-11	True	AATAAA	-9	NA	4661991	4634501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639131_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.13	chr7	-	4406	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	14	657	multi-exon	TRUE	non_canonical	0	0	junction_1	85.1262134845796	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662004	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634896_4634943_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.130	chr7	-	3865	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	68.7040996457165	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAACATTCCTGCTGTG	NA	False	NA	-12	True	AATAAA	-8	NA	4661995	4634502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634902_4634948_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.131	chr7	-	3132	24	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-10	-513	combination_of_known_junctions	FALSE	canonical	1	7	junction_23	66.7413255551761	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGAGAGAGAGAGCG	NA	False	NA	NA	False	NA	NA	NA	4661999	4635006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661677
ES.29922.132	chr7	-	3328	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	18	516	-11	-516	multi-exon	FALSE	canonical	3	244	junction_23	30.5598053220771	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	4662000	4635009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.133	chr7	-	3992	7	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	52	6	intron_retention	FALSE	canonical	3	210	junction_6	121.702734379945	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTGCATTGTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	4687928	4663513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.136	chr7	-	1648	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-137	5	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCTTGCATTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	4688204	4663514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
ES.29922.138	chr7	-	1627	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-32	5	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCTTGCATTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	4688099	4663514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.14	chr7	-	3481	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	-58	620	multi-exon	FALSE	canonical	2	11	junction_1	85.0784137365757	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	4662076	4633873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.142	chr7	-	1444	8	NNC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	61	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.070094446885	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTCTTGCATTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	4687919	4663515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4663836_4666375_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ES.29922.143	chr7	-	1480	8	NNC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	201.85335149609	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTCTTGCATTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	4687942	4663516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4663845_4666379_4666492_4667518_4667628_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.147	chr7	-	1461	8	NNC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-263	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	188.571212121088	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCTGTCTTGCATTGT	NA	False	NA	-5	True	AATAAA	-18	NA	4688330	4663517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4688286
ES.29922.149	chr7	-	2596	6	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	-58	1	intron_retention	FALSE	canonical	3	470	junction_5	31.052214091752	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGCTGTCTTGCATTG	NA	False	NA	-6	True	AATAAA	-17	NA	4687718	4663518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4663845_4666379_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
ES.29922.15	chr7	-	2026	8	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2482	620	multi-exon	FALSE	non_canonical	0	0	junction_1	147.932141089578	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	4636903	4633873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636638_4636692
ES.29922.151	chr7	-	5101	5	ISM	ENSMUSG00000063802.6	ENSMUST00000205952.2	933	6	302	-4059	-31	-2	3prime_fragment	FALSE	canonical	3	470	junction_4	29.6184064392398	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTATGCTGTCTTGCA	NA	False	NA	-9	True	AATAAA	-14	NA	4687691	4663521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
ES.29922.152	chr7	-	1260	8	NIC	ENSMUSG00000063802.6	novel	933	6	NA	NA	32	2	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	197.843269240259	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGACAAGGTTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	4687948	4665130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4665242_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ES.29922.16	chr7	-	1777	7	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	895	3	NA	NA	-2178	620	multi-exon	TRUE	non_canonical	0	0	junction_1	122.107420831914	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	4636599	4633873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634881_4634926_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467
ES.29922.17	chr7	-	3978	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	-82	-34	-82	34	multi-exon	FALSE	canonical	3	244	junction_23	30.5598053220771	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGAACTTGCTCTT	NA	False	NA	31	True	NA	NA	NA	4662100	4634459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.2	chr7	-	3924	9	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2385	1	intron_retention	TRUE	non_canonical	0	0	junction_2	137.737975881744	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGTGTCACCATTATT	NA	False	NA	NA	False	AGTAAA	-13	NA	4636806	4631039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4631753_4632554_4634927_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692
ES.29922.21	chr7	-	4402	31	Fusion	ENSMUSG00000063802.6_ENSMUSG00000052296.8	novel	3862	24	NA	NA	54	1	multi-exon	FALSE	non_canonical	0	0	junction_1	123.407855863753	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTGGGACTGTGAG	NA	False	NA	-2	True	AATAAA	-18	NA	4687926	4634492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634916_4634961_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.22	chr7	-	3920	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.016846580964	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662010	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.23	chr7	-	3996	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	0	intron_retention	TRUE	non_canonical	0	0	junction_1	102.072882118067	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4661995	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634912_4634958_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.24	chr7	-	3555	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.630048050105	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662000	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634912_4634956_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661672
ES.29922.25	chr7	-	3809	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.1262134845796	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662062	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.27	chr7	-	3840	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-25	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662043	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634910_4634956_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.29	chr7	-	3872	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.881892404882	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4661995	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4660561_4660641_4661479
ES.29922.3	chr7	-	6487	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	6	junction_1	66.1908016435986	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCAGTGTCACCATTA	NA	False	NA	NA	False	AGTAAA	-11	NA	4661993	4631041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4631753_4632554_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.32	chr7	-	3680	24	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_23	66.7413255551761	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662034	4634493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661677
ES.29922.35	chr7	-	4499	30	Fusion	ENSMUSG00000063802.6_ENSMUSG00000052296.8	novel	3862	24	NA	NA	1	-1	multi-exon	FALSE	canonical	1	5	junction_23	110.211708496217	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4687979	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.36	chr7	-	3870	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	63.5486506693129	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4662078	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.38	chr7	-	4388	31	Fusion	ENSMUSG00000063802.6_ENSMUSG00000052296.8	novel	3862	24	NA	NA	63	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	123.407855863753	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4687917	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634895_4634943_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ES.29922.4	chr7	-	4544	26	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	531	-1	multi-exon	TRUE	non_canonical	0	0	junction_2	101.778850455289	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCAGTGTCACCATTA	9159	False	NA	NA	False	AGTAAA	-11	NA	4649873	4631041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4631753_4632554_4632802_4634121_4634897_4634939_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706
ES.29922.40	chr7	-	3896	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-81	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4662099	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.41	chr7	-	3138	19	Fusion	ENSMUSG00000063802.6_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-8	-1	multi-exon	FALSE	non_canonical	0	0	junction_13	131.779510949817	708	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4687668	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643178_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
ES.29922.43	chr7	-	3987	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_23	85.3856346068952	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4662032	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.44	chr7	-	4339	20	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	244	junction_19	31.197698615314	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4661983	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4645041_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.45	chr7	-	3212	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	400	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	105.492812358745	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4661580	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634913_4634959_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643175_4644109_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646265_4646367_4646555_4649706_4649940_4661479
ES.29922.46	chr7	-	3879	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	68.7040996457165	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4662000	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634927_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.47	chr7	-	3845	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.541112713777	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4661987	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.48	chr7	-	3564	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.4465866953881	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4662000	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4661479
ES.29922.49	chr7	-	3912	23	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-1	intron_retention	FALSE	canonical	3	244	junction_22	31.0394643495573	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4661987	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.5	chr7	-	4666	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	882	multi-exon	TRUE	non_canonical	0	0	junction_1	67.2624936763093	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTTTGTGGCAGGACC	NA	False	NA	NA	False	NA	NA	NA	4661987	4633611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634909_4634955_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.51	chr7	-	3793	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGCTGTGGGACTGTG	NA	False	NA	-4	True	AATAAA	-16	NA	4661996	4634494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634927_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.53	chr7	-	5932	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	68.5888272328083	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGCTGTGGGACTGT	NA	False	NA	-5	True	AATAAA	-15	NA	4661996	4634495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.57	chr7	-	4048	22	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	244	junction_21	30.1150477298849	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGCTGTGGGACTGT	NA	False	NA	-5	True	AATAAA	-15	NA	4661992	4634495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.58	chr7	-	3803	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-14	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGCTGTGGGACTGT	NA	False	NA	-5	True	AATAAA	-15	NA	4662003	4634495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634890_4634931_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.6	chr7	-	4465	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	3	657	multi-exon	FALSE	canonical	3	28	junction_6	63.5486506693129	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662015	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.62	chr7	-	3627	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.8828544650784	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGCTGTGGGACTGT	NA	False	NA	-5	True	AATAAA	-15	NA	4661950	4634495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479_4661559_4661677
ES.29922.64	chr7	-	3408	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	361	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661619	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634921_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.66	chr7	-	4000	23	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-5	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	69.67628810411	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661994	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634905_4634951_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.67	chr7	-	3277	23	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	391	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	68.4617888235884	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661589	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.68	chr7	-	3968	23	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-5	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	91.4828823802302	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661994	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634908_4634952_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643303_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.69	chr7	-	3911	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	89.7598771097218	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661987	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634898_4634942_4635244_4635339_4635397_4635487_4635599_4636057_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645037_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.7	chr7	-	3512	24	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	2731	7	NA	NA	-1	657	multi-exon	FALSE	canonical	2	11	junction_1	66.4640841368572	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662019	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.72	chr7	-	3626	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	241	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	68.6356645071937	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661739	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.73	chr7	-	3769	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.6006568197375	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661985	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634925_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642969_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.74	chr7	-	3781	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.4443877372794	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4662009	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638986_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.75	chr7	-	3997	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-4	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	103.13717099895	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCCTGCTGTGGGACTG	NA	False	NA	-6	True	AATAAA	-14	NA	4661993	4634496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634907_4634951_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654814_4654931_4661479
ES.29922.78	chr7	-	4685	22	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	70.9445825052771	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662015	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.79	chr7	-	3470	23	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.9478667303962	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661994	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634943_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.8	chr7	-	4516	24	FSM	ENSMUSG00000045282.8_ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	3	-657	3	657	multi-exon	FALSE	canonical	3	244	junction_23	30.5598053220771	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662015	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.80	chr7	-	3823	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	85.6938984666034	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661995	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634890_4634937_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.82	chr7	-	3911	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-13	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	100.016846580964	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662002	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634917_4634959_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.83	chr7	-	3726	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.1262134845796	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661987	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634916_4634965_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.84	chr7	-	3673	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.7996357718337	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661992	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649819_4649940_4661479
ES.29922.85	chr7	-	4043	22	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	71.6507022244144	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661991	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646555_4649706_4649940_4661479
ES.29922.86	chr7	-	4100	22	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-43	-4	intron_retention	FALSE	canonical	3	244	junction_21	31.289591700002	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662061	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642780_4642891_4642978_4643071_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.88	chr7	-	3814	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662020	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634881_4634926_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.9	chr7	-	4452	25	Fusion	ENSMUSG00000045282.8_ENSMUSG00000052296.8	novel	3862	24	NA	NA	-7	657	multi-exon	TRUE	non_canonical	0	0	junction_1	67.2624936763093	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4661996	4633836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_4634906_4634950_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.91	chr7	-	3918	26	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.016846580964	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662013	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634910_4634956_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.93	chr7	-	3749	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.85770236962	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661994	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634896_4634941_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643180_4644122_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
ES.29922.94	chr7	-	3628	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	407	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	87.7479720405105	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661573	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4660561_4660777_4661479
ES.29922.95	chr7	-	3791	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2624936763093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661995	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634921_4634964_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.97	chr7	-	3734	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.1262134845796	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661993	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4634925_4634972_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29922.98	chr7	-	3652	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-14	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_24	67.2624936763093	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4662003	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479_4661772_4661962
ES.29922.99	chr7	-	3913	23	NIC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	244	junction_22	31.0868219004093	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCCTGCTGTGGGACT	NA	False	NA	-7	True	AATAAA	-13	NA	4661995	4634497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ES.29923.1	chr7	+	177	1	Intergenic	novelGene_24806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTATGCACACTCACC	NA	False	NA	NA	False	NA	NA	NA	4689648	4689825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4689600_4689800
ES.29924.1	chr7	+	2730	19	NNC	ENSMUSG00000035390.17	novel	2996	19	NA	NA	117	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	5.06775085865832	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGGCTGGCCTTTGCC	3426	False	NA	3	True	NA	NA	NA	4694195	4718995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4694215_4695652_4695748_4695878_4695969_4697672_4697814_4701698_4701816_4701917_4701952_4702036_4702106_4707126_4707274_4707682_4707715_4708066_4708238_4709018_4709117_4709333_4709494_4709660_4709722_4710114_4710485_4710896_4710946_4711047_4711172_4711816_4712016_4713420_4713511_4718331
ES.29924.2	chr7	+	2712	18	ISM	ENSMUSG00000035390.17	ENSMUST00000048248.9	2996	19	1723	-1	408	1	3prime_fragment	FALSE	canonical	0	0	junction_1	4.94677553920674	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGCTGGCCTTTGCCTC	4880	False	NA	5	True	NA	NA	NA	4695649	4718997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4695748_4695878_4695965_4697672_4697814_4701698_4701816_4701917_4701952_4702036_4702106_4707126_4707274_4707682_4707715_4708066_4708238_4709018_4709117_4709333_4709494_4709660_4709722_4710114_4710485_4710896_4710946_4711047_4711172_4711816_4712016_4713420_4713511_4718331
ES.29924.3	chr7	+	1564	6	ISM	ENSMUSG00000035390.17	ENSMUST00000048248.9	2996	19	16120	1	-1930	-1	3prime_fragment	FALSE	canonical	3	7	junction_3	4.35430821141545	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGGCTGGCCTTTGCC	NA	False	NA	3	True	NA	NA	NA	4710046	4718995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4710485_4710896_4710946_4711047_4711172_4711816_4712016_4713420_4713511_4718331
ES.29925.1	chr7	-	1914	1	Intergenic	novelGene_24807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAATGCTGAGAAG	4632	False	NA	NA	False	NA	NA	NA	4705388	4703474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4703500_4705400
ES.29926.1	chr7	-	180	1	Intergenic	novelGene_24808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAAAGTGGC	9943	False	NA	NA	False	NA	NA	NA	4714585	4714405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4714400_4714600
ES.29927.1	chr7	+	158	1	Intergenic	novelGene_24809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4721533	4721691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4721500_4721700
ES.29928.1	chr7	+	159	1	Intergenic	novelGene_24810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4729638	4729797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4729600_4729800
ES.29929.1	chr7	+	175	1	Intergenic	novelGene_24811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCAACAAC	170	False	NA	NA	False	NA	NA	NA	4741148	4741323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4741100_4741300
ES.2993.1	chr10	-	161	1	Intergenic	novelGene_2333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	66843695	66843534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66843500_66843700
ES.29930.1	chr7	+	4511	5	NIC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	-33	2	intron_retention	FALSE	canonical	3	599	junction_2	41.6675833232502	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTTTTTTTTTTTG	550	False	NA	18	True	ATTAAA	-19	NA	4743080	4750515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.10	chr7	+	2501	8	NIC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	18	-1	intron_retention	FALSE	canonical	3	38	junction_1	229.044866828332	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	601	False	NA	15	True	ATTAAA	-16	NA	4743131	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743181_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.11	chr7	+	1972	7	NNC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	250.082264242966	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	602	False	NA	17	True	ATTAAA	-18	NA	4743132	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743209_4745476_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.12	chr7	+	4140	7	NNC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	19	-3	intron_retention	FALSE	canonical	0	0	junction_1	250.082264242966	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	602	False	NA	13	True	ATTAAA	-14	NA	4743132	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745076_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.13	chr7	+	2162	8	NNC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	301.011017494478	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	603	False	NA	14	True	ATTAAA	-15	NA	4743133	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.14	chr7	+	4344	5	NIC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	599	junction_3	32.0887441324836	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	611	False	NA	15	True	ATTAAA	-16	NA	4743141	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.15	chr7	+	4227	6	NIC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	599	junction_3	37.866079807659	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	613	False	NA	15	True	ATTAAA	-16	NA	4743143	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.16	chr7	+	4455	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-8	-3	intron_retention	FALSE	canonical	0	0	junction_5	296.428216436965	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	613	False	NA	13	True	ATTAAA	-14	NA	4743143	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4747365_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.17	chr7	+	2293	10	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	278.955193534732	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	616	False	NA	14	True	ATTAAA	-15	NA	4743146	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744526_4744608_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.18	chr7	+	5579	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_3	311.4366798493	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	620	False	NA	14	True	ATTAAA	-15	NA	4743150	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4745287_4745617_4745728_4745945_4746110_4746355_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.19	chr7	+	1992	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	234.04848616804	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	620	False	NA	15	True	ATTAAA	-16	NA	4743150	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745668_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.2	chr7	+	2113	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	232.072472846439	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	550	False	NA	15	True	ATTAAA	-16	NA	4743080	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743239_4744778_4744981_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.20	chr7	+	4552	4	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	599	junction_3	64.0954149859584	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	620	False	NA	16	True	ATTAAA	-17	NA	4743150	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4746110_4746245_4746266_4748800
ES.29930.21	chr7	+	3898	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	289.443836305077	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	620	False	NA	13	True	ATTAAA	-14	NA	4743150	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746355_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.22	chr7	+	2341	10	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	264.47422801466	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	621	False	NA	15	True	ATTAAA	-16	NA	4743151	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4743684_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.23	chr7	+	4207	6	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-3	intron_retention	FALSE	canonical	2	17	junction_2	266.704630630966	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	621	False	NA	13	True	ATTAAA	-14	NA	4743151	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745489_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.24	chr7	+	3874	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-3	intron_retention	FALSE	canonical	2	17	junction_2	236.254964314542	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	621	False	NA	13	True	ATTAAA	-14	NA	4743151	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745489_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.25	chr7	+	4299	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	2	intron_retention	FALSE	canonical	3	599	junction_3	53.1541155509148	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTTTTTTTTTTTG	622	False	NA	18	True	ATTAAA	-19	NA	4743152	4750515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.26	chr7	+	3698	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_7	296.00985918495	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	624	False	NA	15	True	ATTAAA	-16	NA	4743154	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749386
ES.29930.27	chr7	+	3711	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	44	junction_5	227.03078996435	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	624	False	NA	17	True	ATTAAA	-18	NA	4743154	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.29	chr7	+	2297	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	226.026789064925	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	625	False	NA	15	True	ATTAAA	-16	NA	4743155	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
ES.29930.3	chr7	+	2611	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-32	1	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	551	False	NA	17	True	ATTAAA	-18	NA	4743081	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.30	chr7	+	3582	7	FSM	ENSMUSG00000059851.16	ENSMUST00000160480.2	1270	7	-1693	-619	1	3	multi-exon	FALSE	canonical	3	6	junction_1	247.867852337132	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTTTTTTTTTTGA	625	False	NA	19	True	ATTAAA	-20	NA	4743155	4750516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4744981_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.31	chr7	+	2783	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	-10	1	1	-1	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	625	False	NA	15	True	ATTAAA	-16	NA	4743155	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.32	chr7	+	3926	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_6	296.214844960545	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	625	False	NA	14	True	ATTAAA	-15	NA	4743155	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4747883_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.33	chr7	+	2539	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	234.04848616804	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	625	False	NA	13	True	ATTAAA	-14	NA	4743155	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745114_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.34	chr7	+	3689	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	226.500793320906	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	625	False	NA	15	True	ATTAAA	-16	NA	4743155	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4743293_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.35	chr7	+	4013	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	0	intron_retention	FALSE	canonical	2	17	junction_1	243.809123883601	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	625	False	NA	16	True	ATTAAA	-17	NA	4743155	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4745287_4745489_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.36	chr7	+	4071	6	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	282.375353032094	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	625	False	NA	16	True	ATTAAA	-17	NA	4743155	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.37	chr7	+	2745	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	271.580760318179	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	626	False	NA	14	True	ATTAAA	-15	NA	4743156	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.38	chr7	+	2317	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-26	1	3	-1	intron_retention	FALSE	canonical	3	456	junction_1	89.2823999384846	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	627	False	NA	15	True	ATTAAA	-16	NA	4743157	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.39	chr7	+	2497	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	44	junction_5	231.556137681468	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	627	False	NA	15	True	ATTAAA	-16	NA	4743157	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.4	chr7	+	2278	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	-99	-2	-29	2	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTTTTTTTTTTTG	554	False	NA	18	True	ATTAAA	-19	NA	4743084	4750515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.40	chr7	+	2223	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	217.919387331646	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTTTTTTTTTTTG	627	False	NA	18	True	ATTAAA	-19	NA	4743157	4750515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745102_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.41	chr7	+	4251	5	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	308.808496482853	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	627	False	NA	16	True	ATTAAA	-17	NA	4743157	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4746110_4748821_4748938_4749075_4749261_4749375
ES.29930.42	chr7	+	2207	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.546801143913	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	627	False	NA	15	True	ATTAAA	-16	NA	4743157	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748775_4748938_4749075_4749261_4749375
ES.29930.43	chr7	+	7219	2	FSM	ENSMUSG00000059851.16	ENSMUST00000152500.2	892	2	-2295	-4032	3	-1	multi-exon	FALSE	canonical	3	677	junction_1	0	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	627	False	NA	15	True	ATTAAA	-16	NA	4743157	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4746110_4746245
ES.29930.44	chr7	+	3855	7	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	-3	intron_retention	FALSE	canonical	3	570	junction_2	59.9594770564995	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	627	False	NA	13	True	ATTAAA	-14	NA	4743157	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.45	chr7	+	4297	6	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	277.532989030133	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	627	False	NA	14	True	ATTAAA	-15	NA	4743157	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4746110_4746238_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.46	chr7	+	3810	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-2	-1	intron_retention	TRUE	non_canonical	0	0	junction_2	242.097804489788	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	633	False	NA	15	True	ATTAAA	-16	NA	4743163	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745361_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.47	chr7	+	3827	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	13	junction_5	237.594406585711	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	633	False	NA	13	True	ATTAAA	-14	NA	4743163	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
ES.29930.48	chr7	+	2436	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	229.383821356259	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	633	False	NA	13	True	ATTAAA	-14	NA	4743163	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745529_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.49	chr7	+	4007	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	570	junction_2	69.5977011114591	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	634	False	NA	13	True	ATTAAA	-14	NA	4743164	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746266_4748800_4749261_4749375
ES.29930.5	chr7	+	3797	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	570	junction_2	59.1256013474187	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	573	False	NA	16	True	ATTAAA	-17	NA	4743103	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.50	chr7	+	2286	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_3	283.180568498264	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	634	False	NA	14	True	ATTAAA	-15	NA	4743164	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745489_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.51	chr7	+	3564	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	223.615602094308	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	634	False	NA	15	True	ATTAAA	-16	NA	4743164	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744608_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.52	chr7	+	4161	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	1	intron_retention	FALSE	canonical	3	13	junction_4	256.590085978048	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	634	False	NA	17	True	ATTAAA	-18	NA	4743164	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
ES.29930.53	chr7	+	4203	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	599	junction_4	51.7509420204116	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	635	False	NA	15	True	ATTAAA	-16	NA	4743165	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4749261_4749375
ES.29930.54	chr7	+	4142	6	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	44	junction_4	261.262320283657	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	635	False	NA	13	True	ATTAAA	-14	NA	4743165	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075
ES.29930.55	chr7	+	4029	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	44	junction_4	245.133750339596	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	636	False	NA	16	True	ATTAAA	-17	NA	4743166	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.56	chr7	+	6955	4	NIC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	655	junction_2	24.3447461820136	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	636	False	NA	13	True	ATTAAA	-14	NA	4743166	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4746110_4746245_4748938_4749075_4749261_4749375
ES.29930.57	chr7	+	3726	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_4	257.796054189267	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	636	False	NA	13	True	ATTAAA	-14	NA	4743166	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.58	chr7	+	2807	10	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	325.638101025519	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	636	False	NA	14	True	ATTAAA	-15	NA	4743166	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743818_4744778_4744981_4745120_4745287_4745489_4745529_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749258_4749375
ES.29930.6	chr7	+	2198	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	-10	1	-10	-1	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	573	False	NA	15	True	ATTAAA	-16	NA	4743103	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.60	chr7	+	2207	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	230.000407608334	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	636	False	NA	14	True	ATTAAA	-15	NA	4743166	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748785_4748938_4749075_4749261_4749375
ES.29930.61	chr7	+	3486	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.500793320906	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	636	False	NA	13	True	ATTAAA	-14	NA	4743166	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744608_4744852_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.62	chr7	+	5866	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	261.396888530322	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	636	False	NA	16	True	ATTAAA	-17	NA	4743166	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.63	chr7	+	3933	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	242.097804489788	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	636	False	NA	13	True	ATTAAA	-14	NA	4743166	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745361_4745489_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.64	chr7	+	4909	3	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	-554	intron_retention	FALSE	canonical	3	677	junction_2	39.5	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGAGTCTATAGGGT	638	False	NA	NA	False	NA	NA	NA	4743168	4748353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4746110_4746245
ES.29930.65	chr7	+	3737	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	257.796054189267	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	638	False	NA	16	True	ATTAAA	-17	NA	4743168	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748775_4748938_4749075_4749261_4749375
ES.29930.66	chr7	+	4554	4	NIC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	6	-2	intron_retention	FALSE	canonical	3	599	junction_2	47.932823363073	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	641	False	NA	14	True	ATTAAA	-15	NA	4743171	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4746110_4746245_4746266_4748800_4749261_4749375
ES.29930.67	chr7	+	6594	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	6	-1	intron_retention	FALSE	canonical	3	655	junction_4	35.4682957019364	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	641	False	NA	15	True	ATTAAA	-16	NA	4743171	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4748938_4749075_4749261_4749375
ES.29930.68	chr7	+	2183	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.546801143913	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	641	False	NA	15	True	ATTAAA	-16	NA	4743171	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.69	chr7	+	3630	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	226.500793320906	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	641	False	NA	13	True	ATTAAA	-14	NA	4743171	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743197_4743292_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.7	chr7	+	4123	7	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-4	1	intron_retention	FALSE	canonical	3	599	junction_4	48.5297732210742	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	579	False	NA	17	True	ATTAAA	-18	NA	4743109	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.70	chr7	+	2856	10	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	278.950413753651	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	644	False	NA	14	True	ATTAAA	-15	NA	4743174	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743818_4743982_4744076_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.71	chr7	+	5267	6	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	456	junction_1	103.642848281973	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	644	False	NA	13	True	ATTAAA	-14	NA	4743174	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743239_4744778_4744981_4745120_4746110_4746245_4748938_4749075_4749261_4749375
ES.29930.72	chr7	+	2249	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	230.000407608334	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	644	False	NA	13	True	ATTAAA	-14	NA	4743174	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748734_4748938_4749075_4749261_4749375
ES.29930.73	chr7	+	4074	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	258.169195167304	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	644	False	NA	15	True	ATTAAA	-16	NA	4743174	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746227_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.74	chr7	+	3551	6	NNC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_3	333.340426591195	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	647	False	NA	15	True	ATTAAA	-16	NA	4743177	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745617_4745728_4745945_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.75	chr7	+	2490	7	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	1	junction_4	260.355952922575	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	648	False	NA	13	True	ATTAAA	-14	NA	4743178	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4748800_4748938_4749075_4749261_4749375
ES.29930.76	chr7	+	3087	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	73	junction_1	217.048663780682	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	652	False	NA	15	True	ATTAAA	-16	NA	4743182	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4743818_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.78	chr7	+	3982	8	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	9	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	242.097804489788	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	662	False	NA	14	True	ATTAAA	-15	NA	4743192	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4743293_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.79	chr7	+	3867	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	9	-1	intron_retention	FALSE	canonical	2	9	junction_1	239.003885204524	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	662	False	NA	15	True	ATTAAA	-16	NA	4743192	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744608_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.8	chr7	+	6777	5	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	11	-1	intron_retention	FALSE	canonical	3	655	junction_3	38.2058568808501	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	594	False	NA	15	True	ATTAAA	-16	NA	4743124	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4748938_4749075_4749261_4749375
ES.29930.80	chr7	+	2396	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.500793320906	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	664	False	NA	17	True	ATTAAA	-18	NA	4743194	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743397_4744707_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.81	chr7	+	3956	8	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	13	-1	intron_retention	FALSE	canonical	2	9	junction_1	310.901782509118	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	666	False	NA	15	True	ATTAAA	-16	NA	4743196	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744608_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
ES.29930.82	chr7	+	2253	10	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	295.016802199886	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	666	False	NA	13	True	ATTAAA	-14	NA	4743196	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4743684_4743818_4744778_4744981_4745161_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.83	chr7	+	4642	4	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	16	-572	intron_retention	FALSE	canonical	3	677	junction_3	37.0075067460043	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	669	False	NA	NA	False	NA	NA	NA	4743199	4748335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245
ES.29930.84	chr7	+	4146	6	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	17	0	intron_retention	FALSE	canonical	3	599	junction_4	50.4579032461715	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	670	False	NA	16	True	ATTAAA	-17	NA	4743200	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.85	chr7	+	4356	5	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	24	-1	intron_retention	FALSE	canonical	3	599	junction_3	56.3443652905949	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	677	False	NA	15	True	ATTAAA	-16	NA	4743207	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4746110_4746245_4746266_4748800_4748938_4749075
ES.29930.86	chr7	+	3632	7	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	47	0	intron_retention	FALSE	canonical	2	7	junction_1	247.498821546016	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	700	False	NA	16	True	ATTAAA	-17	NA	4743230	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745489_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.87	chr7	+	6558	4	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	355	-3	intron_retention	FALSE	canonical	3	655	junction_3	43.3666538560063	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGGTTTTTTTTTTTT	1008	False	NA	13	True	ATTAAA	-14	NA	4743538	4750510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4744981_4745120_4746110_4746245_4748938_4749075
ES.29930.88	chr7	+	3254	9	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	502	0	intron_retention	FALSE	canonical	2	3	junction_3	293.096373868733	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	1155	False	NA	16	True	ATTAAA	-17	NA	4743685	4750513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745489_4745529_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ES.29930.89	chr7	+	3523	5	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	634	-1	intron_retention	FALSE	canonical	0	0	junction_3	303.835790353934	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	1287	False	NA	15	True	ATTAAA	-16	NA	4743817	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4748785_4748938_4749075
ES.29930.9	chr7	+	2194	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	216.601448517779	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTTTTTTTTTTTT	601	False	NA	17	True	ATTAAA	-18	NA	4743131	4750514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
ES.29930.90	chr7	+	4144	7	NNC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	-71	-1	intron_retention	FALSE	canonical	0	0	junction_3	331.806377609325	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	2247	False	NA	15	True	ATTAAA	-16	NA	4744777	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746355_4748067_4748800_4748938_4749075_4749261_4749375
ES.29930.91	chr7	+	2106	8	NNC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	-61	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	236.112218218026	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGTTTTTTTTTTTTT	2257	False	NA	14	True	ATTAAA	-15	NA	4744787	4750511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749267_4749386
ES.29930.92	chr7	+	2211	4	NNC	ENSMUSG00000059851.16	novel	1270	7	NA	NA	50	-1	intron_retention	FALSE	canonical	0	0	junction_1	323.574137134324	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	2842	False	NA	15	True	ATTAAA	-16	NA	4745372	4750512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4746110_4748785_4748938_4749075_4749261_4749375
ES.29930.93	chr7	+	2178	1	NIC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	415	-572	mono-exon	FALSE	NA	NA	NA	NA	NA	730	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3627	False	NA	NA	False	NA	NA	NA	4746157	4748335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4746200_4748300
ES.29931.1	chr7	-	2484	2	NIC	ENSMUSG00000051811.15	novel	391	3	NA	NA	-3	1352	intron_retention	FALSE	canonical	3	803	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCTGTCCTGATAACT	NA	False	NA	NA	False	NA	NA	NA	4756025	4753438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4755849_4755951
ES.29931.10	chr7	-	436	4	FSM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	-3	2	-3	0	multi-exon	FALSE	canonical	0	0	junction_1	378.537830195198	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756025	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4754975_4755106_4755161_4755722_4755849_4755951
ES.29931.14	chr7	-	511	4	FSM	ENSMUSG00000051811.15	ENSMUST00000182048.2	465	4	15	-61	0	0	multi-exon	FALSE	canonical	3	33	junction_3	332.524017511852	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756022	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4754975_4755059_4755161_4755722_4755880_4755951
ES.29931.15	chr7	-	564	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182173.2	391	3	-21	-152	0	0	multi-exon	FALSE	canonical	3	803	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTTTCTTTTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	4756022	4754793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4755161_4755722_4755849_4755951
ES.29931.16	chr7	-	528	4	NIC	ENSMUSG00000051811.15	novel	465	4	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	362.746008477925	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATATTTGTTTCTTTTCT	NA	False	NA	-13	True	AATAAA	-13	NA	4756084	4754794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4754975_4755102_4755161_4755722_4755880_4755951
ES.29931.2	chr7	-	1293	1	NIC	ENSMUSG00000051811.15	novel	553	4	NA	NA	9	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCTTTTCTCGT	NA	False	NA	-10	True	AATAAA	-16	NA	4756084	4754791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4754800_4756100
ES.29931.3	chr7	-	491	4	FSM	ENSMUSG00000051811.15	ENSMUST00000063324.14	553	4	60	2	4	0	multi-exon	FALSE	canonical	3	648	junction_1	73.0677007226099	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756033	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4754975_4755059_4755161_4755722_4755849_4755951
ES.29931.4	chr7	-	1164	2	NIC	ENSMUSG00000051811.15	novel	423	4	NA	NA	-22	0	intron_retention	FALSE	canonical	3	803	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756059	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4755849_4755951
ES.29931.5	chr7	-	496	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183334.8	490	4	-5	-1	-5	0	multi-exon	FALSE	canonical	3	20	junction_2	338.542299999408	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756027	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4754975_4755059_4755172_4755722_4755849_4755951
ES.29931.6	chr7	-	1161	2	NIC	ENSMUSG00000051811.15	novel	465	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756025	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4755880_4755951
ES.29931.8	chr7	-	1045	3	NIC	ENSMUSG00000051811.15	novel	490	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	648	junction_1	77.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756025	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4754975_4755059_4755849_4755951
ES.29931.9	chr7	-	1105	2	ISM	ENSMUSG00000051811.15	ENSMUST00000182738.8	423	4	-17	0	-3	0	intron_retention	FALSE	canonical	3	34	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTGTTTCTTTTCTCG	NA	False	NA	-11	True	AATAAA	-15	NA	4756025	4754792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4754975_4755102
ES.29932.1	chr7	+	167	1	Intergenic	novelGene_24812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTTTTTTTCAA	5836	False	NA	NA	False	NA	NA	NA	4776873	4777040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4776900_4777000
ES.29933.1	chr7	-	3659	2	FSM	ENSMUSG00000030431.9_ENSMUSG00000004371.16	ENSMUST00000168578.3	1375	2	52	-2336	52	2336	multi-exon	FALSE	canonical	3	322	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCGAGTTGTCTTGTGTT	214	False	NA	NA	False	NA	NA	NA	4792603	4785219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4788279_4792003
ES.29933.2	chr7	-	1139	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	93	143	93	-143	multi-exon	FALSE	canonical	3	322	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGATTAGTCGGTCCACG	255	False	NA	NA	False	NA	NA	NA	4792562	4787698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4788279_4792003
ES.29933.3	chr7	-	689	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	71	615	71	0	multi-exon	FALSE	canonical	3	322	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGCTTGCCTGTCTGGT	233	False	NA	-6	True	GATAAA	-16	NA	4792584	4788170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4788279_4792003
ES.29934.1	chr7	+	623	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	-25	508	-25	-4	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2668	False	NA	13	True	AATAAA	-28	NA	4795847	4797557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ES.29934.2	chr7	+	874	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	-70	-32	46	-4	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2739	False	NA	13	True	AATAAA	-28	NA	4795918	4797557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
ES.29934.3	chr7	+	576	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	2852.82127901486	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2782	False	NA	13	True	AATAAA	-28	NA	4795961	4797557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4795998_4796252_4796409_4796501_4796626_4797062_4797182_4797416
ES.29934.4	chr7	+	510	5	NIC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	-27	-17	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	2677.05625407835	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAGGCCTCCAAAATGT	2782	False	NA	0	True	AATAAA	-15	NA	4795961	4797544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797048_4797182_4797416
ES.29934.5	chr7	+	1266	3	NIC	ENSMUSG00000030432.13	novel	772	4	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	6459	junction_1	95	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2784	False	NA	13	True	AATAAA	-28	NA	4795963	4797557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4796409_4796501_4797182_4797416
ES.29934.6	chr7	+	1197	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	91	-182	-25	182	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGGACTCAGTGGCC	2784	False	NA	NA	False	AGTAAA	-16	NA	4795963	4798247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ES.29934.7	chr7	+	1028	3	NIC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	3938	junction_1	1355.5	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTGTGCTCATTG	2793	False	NA	13	True	AATAAA	-28	NA	4795972	4797557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4795998_4796319_4797182_4797416
ES.29934.8	chr7	+	1491	2	FSM	ENSMUSG00000030432.13	ENSMUST00000206617.2	335	2	-423	-733	-16	-5	multi-exon	FALSE	canonical	3	6459	junction_1	0	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGTTTTGTGCTCATT	2793	False	NA	12	True	AATAAA	-27	NA	4795972	4797556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4796409_4796501
ES.29934.9	chr7	+	2454	5	NNC	ENSMUSG00000030432.13	novel	772	4	NA	NA	0	1630	intron_retention	FALSE	non_canonical	0	0	junction_4	2863.20786007583	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTTGTTAGTCCATGAC	2809	False	NA	NA	False	NA	NA	NA	4795988	4799695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416_4798694_4799181
ES.29935.1	chr7	+	134	1	Intergenic	novelGene_24813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9935	False	NA	NA	False	NA	NA	NA	4803114	4803248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4803100_4803200
ES.29936.1	chr7	+	176	2	Antisense	novelGene_ENSMUSG00000110221.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	4803475	4907165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4803526_4907039
ES.29936.10	chr7	+	2789	3	ISM	ENSMUSG00000086784.3	ENSMUST00000125249.3	2244	6	-33	2948	-33	-2948	intron_retention	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAATAAGAGAAAACAAAAC	2999	False	NA	NA	False	NA	NA	NA	4880118	4897024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4880193_4894182_4894330_4894456
ES.29936.11	chr7	+	1208	1	ISM	ENSMUSG00000086784.3	ENSMUST00000125249.3	2244	6	18613	0	18613	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTGTGGTATTTG	NA	False	NA	9	True	NA	NA	NA	4898764	4899972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4898800_4900000
ES.29936.12	chr7	+	4294	2	Antisense	novelGene_ENSMUSG00000110221.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCAACTCAGATTTCT	NA	False	NA	NA	False	NA	NA	NA	4901596	4905932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4905028_4905069
ES.29936.13	chr7	+	2923	1	Intergenic	novelGene_24820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGTTTGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	4903153	4906076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4903200_4906100
ES.29936.14	chr7	+	201	1	Intergenic	novelGene_24821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTCTACACAACAACA	NA	False	NA	NA	False	NA	NA	NA	4906988	4907189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4907000_4907200
ES.29936.2	chr7	+	1961	4	Intergenic	novelGene_24814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTGTTTGTGTGC	2961	False	NA	NA	False	ATTAAA	-19	NA	4815944	4823668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4816051_4818164_4818253_4819075_4819277_4822102
ES.29936.3	chr7	+	2113	1	Intergenic	novelGene_24815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTAGTCTGCCTGATT	2966	False	NA	NA	False	AATAAA	-16	NA	4815949	4818062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4815900_4818100
ES.29936.4	chr7	+	615	1	Intergenic	novelGene_24816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCCTCGTTCCTTTT	2988	False	NA	NA	False	NA	NA	NA	4815971	4816586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4816000_4816600
ES.29936.5	chr7	+	158	1	Intergenic	novelGene_24817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6093	False	NA	NA	False	NA	NA	NA	4819076	4819234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4819100_4819200
ES.29936.6	chr7	+	2157	4	Antisense	novelGene_ENSMUSG00000052605.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	4828605	4849639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4828645_4836071_4836226_4844889_4844996_4847781
ES.29936.7	chr7	+	2244	4	Antisense	novelGene_ENSMUSG00000052605.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	4829146	4849639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_4829273_4836071_4836226_4844889_4844996_4847781
ES.29936.8	chr7	+	159	1	Intergenic	novelGene_24818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATGAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	4864138	4864297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_4864100_4864300
ES.29936.9	chr7	+	969	7	NNC	ENSMUSG00000086784.3	novel	2244	6	NA	NA	-100	-1259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTATTGCGTTTGTGG	2932	False	NA	18	True	AGTAAA	-22	NA	4880051	4898713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4880193_4894182_4894330_4894456_4894667_4894829_4894901_4894992_4895111_4898315_4898501_4898616
ES.29937.1	chr7	+	4046	3	NNC	ENSMUSG00000074406.6	novel	3523	3	NA	NA	-1598	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTGTTTTCATGG	1373	False	NA	9	True	AATAAA	-15	NA	4916617	4925002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4917329_4920408_4920516_4921774
ES.29937.2	chr7	+	3562	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	-38	-1	-38	1	multi-exon	FALSE	canonical	3	14	junction_2	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTGTTTTCATGG	2933	False	NA	9	True	AATAAA	-15	NA	4918177	4925002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4918405_4920408_4920516_4921774
ES.29937.3	chr7	+	3426	3	NNC	ENSMUSG00000074406.6	novel	3523	3	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTTGTTTTCATGG	2961	False	NA	9	True	AATAAA	-15	NA	4918205	4925002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_4918405_4920408_4920504_4921870
ES.29937.4	chr7	+	3394	2	NIC	ENSMUSG00000074406.6	novel	3523	3	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2993	False	NA	8	True	AATAAA	-14	NA	4918237	4925001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_4918405_4921774
ES.29938.1	chr7	+	2203	2	FSM	ENSMUSG00000035285.7	ENSMUST00000208754.2	476	2	-746	-981	-20	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCCTGTCTGATG	2359	False	NA	17	True	AATAAA	-17	NA	4925229	4928005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_4926329_4926901
ES.29939.1	chr7	+	2921	7	ISM	ENSMUSG00000035279.9	ENSMUST00000057612.9	4348	14	4249	9	4249	-9	3prime_fragment	FALSE	canonical	0	0	junction_1	1.15470053837925	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCGAAGTGTGGGTG	7197	False	NA	NA	False	NA	NA	NA	4933032	4947816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_4933163_4936133_4936452_4939261_4939826_4939906_4940222_4940463_4940632_4945712_4945872_4946549
ES.2994.1	chr10	+	1901	1	Antisense	novelGene_ENSMUSG00000019873.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCATTTTTCTGGAAGC	NA	False	NA	NA	False	NA	NA	NA	66846116	66848017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_66846100_66848000
ES.29940.1	chr7	-	3062	6	FSM	ENSMUSG00000060860.9	ENSMUST00000205815.2	1126	6	0	-1936	0	1936	multi-exon	FALSE	canonical	0	0	junction_1	4990.66488556385	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTTGCGCCCTTGTCTA	NA	False	NA	NA	False	AATACA	-19	NA	4815350	4795608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4797728_4800577_4800731_4811221_4811484_4813420_4813612_4814407_4814556_4815161
ES.29940.10	chr7	-	1791	3	NIC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	9878	junction_1	101.5	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	False	NA	-32	True	AATAAA	-8	NA	4815353	4811019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4811484_4813420_4814556_4815161
ES.29940.12	chr7	-	953	4	FSM	ENSMUSG00000060860.9	ENSMUST00000205885.2	518	4	-34	-401	-34	-7	multi-exon	FALSE	canonical	3	34	junction_3	4812.94956918889	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	False	NA	-32	True	AATAAA	-8	NA	4815157	4811019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815007
ES.29940.14	chr7	-	804	3	NIC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	-3	-7	combination_of_known_splicesites	FALSE	canonical	2	45	junction_1	5018	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	False	NA	-32	True	AATAAA	-8	NA	4815353	4811019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4811484_4814407_4814556_4815161
ES.29940.16	chr7	-	833	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	235	170	-4	-170	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAGCGAGCACTGAGG	NA	False	NA	NA	False	AAAAAG	-5	NA	4815354	4811182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
ES.29940.17	chr7	-	5603	5	NNC	ENSMUSG00000053550.14	novel	6006	6	NA	NA	-258	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18465843842649	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCCTCAAGGTTTTCT	5572	False	NA	NA	False	AATAAA	-17	NA	4839431	4828549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4833275_4833757_4833908_4834671_4834856_4837228_4837384_4839042
ES.29940.18	chr7	-	6130	5	FSM	ENSMUSG00000053550.14	ENSMUST00000117452.8	5211	5	-919	0	-919	0	multi-exon	FALSE	canonical	3	9	junction_4	3.08220700148449	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	4911	False	NA	NA	False	AATAAA	-16	NA	4840092	4828550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4833275_4833757_4833908_4834671_4834723_4837228_4837384_4839042
ES.29940.19	chr7	-	5365	4	ISM	ENSMUSG00000053550.14	ENSMUST00000119433.4	3481	5	8317	-2475	-205	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.86744175568088	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	5625	False	NA	NA	False	AATAAA	-16	NA	4839378	4828550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4833275_4833757_4833908_4837228_4837384_4839042
ES.29940.2	chr7	-	172	2	Antisense	novelGene_ENSMUSG00000108840.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	4938939	4798657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_4798734_4938843
ES.29940.20	chr7	-	5297	5	NNC	ENSMUSG00000053550.14	novel	6006	6	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.1894019222742	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCAGCCTCAAGGTTTT	5975	False	NA	NA	False	AATAAA	-15	NA	4839028	4828551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4833421_4833757_4833908_4834671_4834723_4837228_4837384_4838956
ES.29940.21	chr7	-	2908	4	ISM	ENSMUSG00000053550.14	ENSMUST00000119433.4	3481	5	8186	113	-336	-113	3prime_fragment	FALSE	canonical	3	5	junction_2	2.86744175568088	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTGTCCTCCTTTCAT	5494	False	NA	NA	False	NA	NA	NA	4839509	4831138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4833275_4833757_4833908_4837228_4837384_4839042
ES.29940.22	chr7	-	3537	5	FSM	ENSMUSG00000053550.14	ENSMUST00000117452.8	5211	5	-916	2590	-916	-115	multi-exon	FALSE	canonical	3	9	junction_4	3.08220700148449	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCAGTGTCCTCCTTTC	4914	False	NA	NA	False	NA	NA	NA	4840089	4831140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4833275_4833757_4833908_4834671_4834723_4837228_4837384_4839042
ES.29940.23	chr7	-	2106	4	NNC	ENSMUSG00000053550.14	novel	5211	5	NA	NA	113	-445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.92160768674447	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGAGCTCTGTGCTTCTT	5943	False	NA	NA	False	NA	NA	NA	4839060	4831470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4833275_4833757_4833908_4837228_4837363_4839042
ES.29940.24	chr7	-	2073	4	ISM	ENSMUSG00000053550.14	ENSMUST00000117452.8	5211	5	1875	2922	216	-447	3prime_fragment	FALSE	canonical	3	10	junction_3	2.94392028877595	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGAGCTCTGTGCTTC	7705	False	NA	NA	False	NA	NA	NA	4837298	4831472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_4833275_4833757_4833908_4834671_4834723_4837228
ES.29940.25	chr7	-	2085	4	NIC	ENSMUSG00000053550.14	novel	5211	5	NA	NA	54	789	intron_retention	FALSE	canonical	3	9	junction_3	1.24721912892465	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATATGTCTGTGTTTT	5884	False	NA	NA	False	NA	NA	NA	4839119	4832386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4833275_4833757_4834723_4837228_4837384_4839042
ES.29940.26	chr7	-	210	1	Intergenic	novelGene_24819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTGCCTGCCCTTCTTC	NA	False	NA	NA	False	NA	NA	NA	4887781	4887571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4887600_4887800
ES.29940.27	chr7	-	3169	2	FSM	ENSMUSG00000110221.2	ENSMUST00000210663.2	1279	2	-139	-1751	-139	1751	multi-exon	TRUE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAGAAAAAAAAAGGAAA	2757	False	NA	NA	False	NA	NA	NA	4909654	4899697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4902496_4909283
ES.29940.28	chr7	-	182	1	Genic_Genomic	ENSMUSG00000109441.2	novel	NA	NA	NA	NA	-97	-3387	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGCCGGGATCGTGG	NA	False	NA	-7	True	NA	NA	NA	4915453	4915271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_4915300_4915500
ES.29940.29	chr7	-	201	1	Intergenic	novelGene_24822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAAACTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	4938941	4938740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_4938700_4938900
ES.29940.3	chr7	-	4649	2	NIC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	4	-66	intron_retention	FALSE	canonical	3	10081	junction_1	0	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	4815346	4810091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4814556_4815161
ES.29940.4	chr7	-	1358	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	-97	-23	-97	23	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCCTGTATTGTGG	NA	False	NA	-2	True	AATAAA	-38	NA	4815686	4810989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
ES.29940.6	chr7	-	3734	2	NIC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	10081	junction_1	0	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGCCTGAAGTGTC	NA	False	NA	-25	True	AATAAA	-15	NA	4815352	4811012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_4814556_4815161
ES.29940.8	chr7	-	981	4	NNC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4872.58870280128	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	False	NA	-32	True	AATAAA	-8	NA	4815348	4811019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_4811484_4813429_4813612_4814407_4814556_4815161
ES.29941.1	chr7	-	2138	4	FSM	ENSMUSG00000030433.16	ENSMUST00000032598.14	1139	4	-56	-943	2	-4	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTTGTGCAGTGACTC	4456	False	NA	NA	False	AATAAA	-15	NA	4967403	4959136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4960713_4961828_4962032_4965929_4966185_4967299
ES.29942.1	chr7	-	2886	1	FSM	ENSMUSG00000051550.11	ENSMUST00000162731.2	2489	1	-397	0	292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTGAGGCTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	4998736	4995850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_4995800_4998700
ES.29943.1	chr7	+	184	1	Intergenic	novelGene_24823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5000219	5000403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_5000200_5000400
ES.29944.1	chr7	+	175	1	Intergenic	novelGene_24824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATATTTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	5012781	5012956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_5012800_5013000
ES.29945.1	chr7	+	4508	1	Genic_Genomic	ENSMUSG00000051184.8_ENSMUSG00000109129.2	novel	NA	NA	NA	NA	-19	1470	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTCAAGGCCACCCTGA	2921	False	NA	NA	False	NA	NA	NA	5018449	5022957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_5018400_5023000
ES.29945.2	chr7	+	2374	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	-10	-1222	-10	1221	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCCTGAAGGCTCTGG	2930	False	NA	NA	False	ATTAAA	-20	NA	5018458	5022708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5018560_5020435
ES.29945.3	chr7	+	1121	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	26	-5	26	4	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTTCAGTCATGGT	2966	False	NA	10	True	AATAAA	-20	NA	5018494	5021491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5018560_5020435
ES.29945.4	chr7	+	1130	2	FSM	ENSMUSG00000051184.8	ENSMUST00000209030.2	1128	2	4	-6	4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTGTGTTCAGTCA	3281	False	NA	6	True	AATAAA	-16	NA	5018809	5021487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5018888_5020435
ES.29946.1	chr7	+	3961	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	-187	460	7	-108	5prime_fragment	FALSE	canonical	2	2	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGGGGTCTGTCCTTGC	2761	False	NA	5	True	AATAAA	-15	NA	5023381	5035677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5023655_5031989
ES.29946.2	chr7	+	3550	2	NNC	ENSMUSG00000074405.9	novel	93	2	NA	NA	46	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGCTGGGGTCTGTCCTT	2800	False	NA	3	True	AATAAA	-13	NA	5023420	5035675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5023655_5032359
ES.29946.3	chr7	+	3466	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	8	760	2	-408	5prime_fragment	FALSE	canonical	2	2	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCTTCCTTCTT	2956	False	NA	NA	False	ATTAAA	-18	NA	5023576	5035377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5023655_5031989
ES.29946.4	chr7	+	808	2	ISM	ENSMUSG00000074405.9	ENSMUST00000085427.6	2751	3	10363	-85	1609	85	3prime_fragment	FALSE	canonical	3	4	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGGCTAATCTTGAAC	NA	False	NA	1	True	NA	NA	NA	5033931	5036222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5034279_5035761
ES.29947.1	chr7	-	2589	4	NNC	ENSMUSG00000061374.15	novel	2306	3	NA	NA	-106	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.586220720504	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTTTTTTGATCCTG	4166	False	NA	0	True	AATAAA	-18	NA	5016343	5010053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010959_5011001_5012205_5015676_5016022_5016207
ES.29947.11	chr7	-	6032	2	FSM	ENSMUSG00000061374.15	ENSMUST00000209060.2	741	2	367	-5658	-39	-1	multi-exon	FALSE	canonical	3	199	junction_1	0	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4233	False	NA	-5	True	AATAAA	-13	NA	5016276	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5016022_5016207
ES.29947.12	chr7	-	2580	3	FSM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	-59	-215	-59	-1	multi-exon	FALSE	canonical	3	199	junction_2	122.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4213	False	NA	-5	True	AATAAA	-13	NA	5016296	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5012205_5015676_5016022_5016207
ES.29947.15	chr7	-	2723	3	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	253	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	222	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	3510	False	NA	-5	True	AATAAA	-13	NA	5016999	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5012205_5015676_5016022_5016767
ES.29947.16	chr7	-	2482	4	NNC	ENSMUSG00000061374.15	novel	2546	3	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.145241191992	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	2854	False	NA	-5	True	AATAAA	-13	NA	5017655	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010947_5010987_5012205_5015676_5016022_5017623
ES.29947.17	chr7	-	2561	3	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	222	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4226	False	NA	-5	True	AATAAA	-13	NA	5016283	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5012205_5015676_5016022_5016213
ES.29947.18	chr7	-	2487	4	NNC	ENSMUSG00000061374.15	novel	2306	3	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	181.586220720504	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4234	False	NA	-5	True	AATAAA	-13	NA	5016275	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5012205_5015676_5015855_5015926_5016022_5016207
ES.29947.19	chr7	-	2493	4	NNC	ENSMUSG00000061374.15	novel	2306	3	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.586220720504	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGTCTTGTTTTTTGA	4255	False	NA	-5	True	AATAAA	-13	NA	5016254	5010058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010952_5010996_5012205_5015676_5016022_5016207
ES.29947.20	chr7	-	2486	4	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-5803	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.06830356502	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTACTGTCTTGTTTTTT	NA	False	NA	-7	True	AATAAA	-11	NA	5023499	5010060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010959_5011001_5012205_5015676_5016022_5023459
ES.29947.21	chr7	-	2548	4	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-1049	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	209.06830356502	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTACTGTCTTGTTTTTT	1764	False	NA	-7	True	AATAAA	-11	NA	5018745	5010060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010959_5011001_5012205_5015676_5016022_5018643
ES.29947.22	chr7	-	2605	3	FSM	ENSMUSG00000061374.15	ENSMUST00000165320.3	2653	3	45	3	1	-3	multi-exon	FALSE	canonical	2	9	junction_2	217.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTACTGTCTTGTTTTTT	2858	False	NA	-7	True	AATAAA	-11	NA	5017651	5010060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5012205_5015676_5016022_5017535
ES.29947.23	chr7	-	2669	3	FSM	ENSMUSG00000061374.15	ENSMUST00000167804.9	2637	3	-35	3	-19	-3	multi-exon	FALSE	canonical	1	2	junction_2	221	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTACTGTCTTGTTTTTT	3222	False	NA	-7	True	AATAAA	-11	NA	5017287	5010060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5012205_5015676_5016022_5017107
ES.29947.24	chr7	-	1516	1	NIC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-148	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAGAAA	3718	False	NA	NA	False	NA	NA	NA	5016791	5015275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_5015300_5016800
ES.29947.25	chr7	-	799	2	FSM	ENSMUSG00000061374.15	ENSMUST00000209060.2	741	2	381	-439	-25	-28	multi-exon	FALSE	canonical	3	199	junction_1	0	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAGAAAAAAAAAAAAAAGA	4247	False	NA	NA	False	NA	NA	NA	5016262	5015277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5016022_5016207
ES.29947.26	chr7	-	98	1	Antisense	novelGene_ENSMUSG00000051184.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCGCTCACCAGAGTGG	NA	False	NA	NA	False	NA	NA	NA	5021148	5021050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5021000_5021100
ES.29947.3	chr7	-	2599	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	-51	-2	-32	2	multi-exon	FALSE	canonical	3	184	junction_2	130	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTTTTTTGATCC	2781	False	NA	-2	True	AATAAA	-16	NA	5017728	5010055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5012205_5015676_5016022_5017623
ES.29947.4	chr7	-	2574	4	NNC	ENSMUSG00000061374.15	novel	2546	3	NA	NA	-50	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.145241191992	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTTTTTTGATCC	2763	False	NA	-2	True	AATAAA	-16	NA	5017746	5010055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010959_5011001_5012205_5015676_5016022_5017623
ES.29947.6	chr7	-	2517	3	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	222	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTTTTTTGATCC	4307	False	NA	-2	True	AATAAA	-16	NA	5016202	5010055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5012205_5015676_5016022_5016179
ES.29947.7	chr7	-	2609	3	NNC	ENSMUSG00000061374.15	novel	2637	3	NA	NA	-1055	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	222	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTTTTTTGATCC	1758	False	NA	-2	True	AATAAA	-16	NA	5018751	5010055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5012205_5015676_5016022_5018636
ES.29947.8	chr7	-	2570	4	NNC	ENSMUSG00000061374.15	novel	2653	3	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.214864331688	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTTTTTTGATC	2854	False	NA	-3	True	AATAAA	-15	NA	5017655	5010056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010959_5011001_5012205_5015676_5016022_5017535
ES.29947.9	chr7	-	2503	4	NNC	ENSMUSG00000061374.15	novel	2546	3	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.145241191992	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTTTTTTGATC	2827	False	NA	-3	True	AATAAA	-15	NA	5017682	5010056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_5010950_5010998_5012205_5015676_5016022_5017623
ES.29948.1	chr7	-	3223	4	Antisense	novelGene_ENSMUSG00000035228.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTACTTTGTGTGTG	3447	False	NA	NA	False	NA	NA	NA	5034991	5027741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5028169_5031951_5032155_5032257_5033343_5033483
ES.29948.2	chr7	-	2816	2	Antisense	novelGene_ENSMUSG00000035228.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTGTTAGTATCATT	4419	False	NA	NA	False	AATATA	-14	NA	5034019	5031062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5033343_5033483
ES.29949.1	chr7	+	2865	1	FSM	ENSMUSG00000116184.2	ENSMUST00000076791.4	1129	1	-217	-1519	-217	1519	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTCCTCTGAAGTCC	NA	False	NA	NA	False	NA	NA	NA	5036899	5039764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5036900_5039800
ES.2995.1	chr10	+	2933	1	Intergenic	novelGene_2336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTATTCATTATCACT	NA	False	NA	NA	False	NA	NA	NA	66903326	66906259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66903300_66906300
ES.29950.1	chr7	+	2008	5	NNC	ENSMUSG00000055633.7	novel	1096	2	NA	NA	-13263	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4420050587701	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGGTTCTTACTTGC	1986	False	NA	3	True	AATAAA	-14	NA	5041273	5056721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5041818_5053518_5053702_5053818_5053947_5054478_5054714_5055803
ES.29950.2	chr7	+	1728	4	NNC	ENSMUSG00000055633.7	novel	1096	2	NA	NA	-13253	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8548533034381	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGGTTCTTACTTGC	1996	False	NA	3	True	AATAAA	-14	NA	5041283	5056721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5041818_5053905_5053947_5054478_5054714_5055803
ES.29950.3	chr7	+	1723	1	Intergenic	novelGene_24825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	5289	False	NA	NA	False	NA	NA	NA	5044576	5046299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_5044600_5046300
ES.29950.4	chr7	+	2172	1	NIC	ENSMUSG00000055633.7	novel	1096	2	NA	NA	13	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGGGTTCTTACTTGC	2932	False	NA	3	True	AATAAA	-14	NA	5054549	5056721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5054500_5056700
ES.29951.1	chr7	+	1575	8	Fusion	ENSMUSG00000035228.16_ENSMUSG00000109549.2	novel	1318	6	NA	NA	-625	-3	multi-exon	FALSE	canonical	0	0	junction_2	7.11996331107264	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	122	False	NA	NA	False	ATTAAA	-18	NA	5056845	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_5057035_5057499_5057552_5059131_5059240_5060497_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ES.29951.2	chr7	+	2864	7	Fusion	ENSMUSG00000035228.16_ENSMUSG00000109549.2	novel	1534	5	NA	NA	-608	-3	intron_retention	FALSE	canonical	0	0	junction_1	7.26674311886388	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	139	False	NA	NA	False	ATTAAA	-18	NA	5056862	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_5057035_5057451_5057552_5059131_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ES.29951.3	chr7	+	1443	7	Fusion	ENSMUSG00000035228.16_ENSMUSG00000109549.2	novel	1534	5	NA	NA	-602	-4	multi-exon	FALSE	canonical	1	1	junction_1	6.86577664134866	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAAACTGGGCCCCAGGT	145	False	NA	NA	False	ATTAAA	-17	NA	5056868	5063777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_5057035_5057499_5057552_5060497_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ES.29951.4	chr7	+	1498	7	NNC	ENSMUSG00000035228.16	novel	1534	5	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.07106781186548	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	69	False	NA	NA	False	ATTAAA	-18	NA	5059732	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5059797_5059899_5060108_5060497_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ES.29951.5	chr7	+	1789	5	NNC	ENSMUSG00000035228.16	novel	601	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	1	2	junction_1	3.8405728739343	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	71	False	NA	NA	False	ATTAAA	-18	NA	5059734	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5059797_5060497_5060659_5060797_5060903_5060990_5061168_5062494
ES.29951.6	chr7	+	1248	6	NNC	ENSMUSG00000035228.16	novel	1534	5	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.68131723539603	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	249	False	NA	NA	False	ATTAAA	-18	NA	5059912	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5059967_5060529_5060659_5060797_5060903_5060990_5061168_5062494_5062705_5063205
ES.29951.7	chr7	+	3192	3	NIC	ENSMUSG00000035228.16	novel	1534	5	NA	NA	32	-3	intron_retention	FALSE	canonical	3	10	junction_1	5.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGGGCCCCAGGTC	283	False	NA	NA	False	ATTAAA	-18	NA	5059946	5063778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5060659_5060797_5062705_5063205
ES.29952.1	chr7	+	2422	14	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	-892	-2	intron_retention	FALSE	canonical	0	0	junction_2	802.352731238228	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGATCCTCATCTGTGTC	1988	False	NA	31	True	ATTAAA	-21	NA	5064249	5082935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5064455_5064573_5064744_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.11	chr7	+	2213	11	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	50	0	intron_retention	FALSE	canonical	0	0	junction_9	546.863090727469	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	122	False	NA	27	True	ATTAAA	-17	NA	5065191	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.12	chr7	+	2183	13	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-50	-1	intron_retention	FALSE	canonical	0	0	junction_11	668.492998384343	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATGGATCCTCATCT	124	False	NA	26	True	ATTAAA	-16	NA	5065193	5082930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5081738_5081798_5082180
ES.29952.13	chr7	+	3388	11	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	1559	junction_6	136.507289182666	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGATCCTCATCTGTGTC	125	False	NA	31	True	ATTAAA	-21	NA	5065194	5082935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.18	chr7	+	2821	12	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_10	681.963317886049	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	12	False	NA	27	True	ATTAAA	-17	NA	5065220	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.19	chr7	+	2294	14	NNC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_7	849.765655130315	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCCTCATCTGTGTCC	13	False	NA	32	True	ATTAAA	-22	NA	5065221	5082936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069060_5069181_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.2	chr7	+	2961	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	-771	-7	-771	7	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTGTCCAGTGTGTC	2109	False	NA	40	True	ATTAAA	-30	NA	5064370	5082944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.20	chr7	+	2041	12	NNC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-21	0	intron_retention	FALSE	non_canonical	0	0	junction_4	806.74486222552	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	14	False	NA	27	True	ATTAAA	-17	NA	5065222	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071027_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078646_5082180
ES.29952.21	chr7	+	6226	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_5	666.510178603311	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCCTCATCTGTGTCC	15	False	NA	32	True	ATTAAA	-22	NA	5065223	5082936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.23	chr7	+	1626	7	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_6	848.96579240077	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	17	False	NA	27	True	ATTAAA	-17	NA	5065225	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5072251_5082371
ES.29952.24	chr7	+	2442	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_5	664.124851350872	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	17	False	NA	27	True	ATTAAA	-17	NA	5065225	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.26	chr7	+	2074	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_11	523.061237190484	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	18	False	NA	27	True	ATTAAA	-17	NA	5065226	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078698_5082180
ES.29952.27	chr7	+	2226	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	673.556822687165	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	18	False	NA	27	True	ATTAAA	-17	NA	5065226	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.28	chr7	+	2019	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-14	0	intron_retention	FALSE	canonical	1	1	junction_11	522.782779661633	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	21	False	NA	27	True	ATTAAA	-17	NA	5065229	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078646_5082180
ES.29952.29	chr7	+	2268	14	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_7	795.043990446794	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	22	False	NA	27	True	ATTAAA	-17	NA	5065230	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069060_5069181_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.3	chr7	+	2336	14	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	-571	0	intron_retention	FALSE	canonical	0	0	junction_1	795.279676160286	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	2309	False	NA	27	True	ATTAAA	-17	NA	5064570	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5064744_5069060_5069181_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.30	chr7	+	2057	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_10	525.567461915969	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	23	False	NA	27	True	ATTAAA	-17	NA	5065231	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078197_5078466_5078716_5082180
ES.29952.34	chr7	+	2088	12	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_10	697.429755934467	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	26	False	NA	27	True	ATTAAA	-17	NA	5065234	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078201_5078457_5078716_5082159
ES.29952.36	chr7	+	2255	13	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	669.25671872276	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	32	False	NA	27	True	ATTAAA	-17	NA	5065240	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071614_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.37	chr7	+	2098	12	NNC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	843.773813254408	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	39	False	NA	27	True	ATTAAA	-17	NA	5065247	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.38	chr7	+	2124	13	NNC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_6	768.84409541568	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	58	False	NA	27	True	ATTAAA	-17	NA	5065266	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.39	chr7	+	2205	13	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	158	0	intron_retention	FALSE	canonical	0	0	junction_6	828.092620960294	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	252	False	NA	27	True	ATTAAA	-17	NA	5065460	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065611_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.4	chr7	+	2622	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	-522	-12	-420	7	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTGTCCAGTGTGTC	2460	False	NA	40	True	ATTAAA	-30	NA	5064721	5082944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.40	chr7	+	2053	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	238	0	intron_retention	FALSE	canonical	1	1	junction_1	515.187537065006	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	332	False	NA	27	True	ATTAAA	-17	NA	5065540	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065611_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.41	chr7	+	2063	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	240	0	intron_retention	FALSE	canonical	0	0	junction_10	688.546858869826	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	334	False	NA	27	True	ATTAAA	-17	NA	5065542	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065611_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.42	chr7	+	2188	13	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	458	-1	intron_retention	FALSE	canonical	2	2	junction_1	648.571651785676	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATGGATCCTCATCT	552	False	NA	26	True	ATTAAA	-16	NA	5065760	5082930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065847_5069060_5069181_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.43	chr7	+	2073	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	459	-1	intron_retention	FALSE	canonical	2	7	junction_1	513.507739325424	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCCTCATCTGTGTCC	553	False	NA	32	True	ATTAAA	-22	NA	5065761	5082936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065847_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.44	chr7	+	2128	13	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	459	0	intron_retention	FALSE	canonical	0	0	junction_6	750.324707487809	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	553	False	NA	27	True	ATTAAA	-17	NA	5065761	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065847_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.45	chr7	+	2058	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	850	0	intron_retention	FALSE	canonical	0	0	junction_10	685.695400172833	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	944	False	NA	27	True	ATTAAA	-17	NA	5066152	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5066216_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.46	chr7	+	3070	12	NNC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-1839	0	intron_retention	FALSE	non_canonical	0	0	junction_5	780.516898022825	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	560	False	NA	27	True	ATTAAA	-17	NA	5068387	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078240_5078466_5078716_5082180
ES.29952.47	chr7	+	5957	10	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	-707	0	intron_retention	FALSE	canonical	0	0	junction_8	569.753357944373	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	324	False	NA	27	True	ATTAAA	-17	NA	5069519	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.48	chr7	+	1700	8	ISM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	5886	7	-1	-1	3prime_fragment	FALSE	canonical	3	1559	junction_3	112.289167522327	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATGGATCCTCATCT	1832	False	NA	26	True	ATTAAA	-16	NA	5071027	5082930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.49	chr7	+	1711	8	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	620.668402052273	1164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATGGATCCTCATCT	1832	False	NA	26	True	ATTAAA	-16	NA	5071027	5082930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078238_5078466_5078716_5082180
ES.29952.5	chr7	+	2217	13	NNC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_6	653.577011317123	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	92	False	NA	27	True	ATTAAA	-17	NA	5065161	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5071792_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.50	chr7	+	1640	8	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	53	0	intron_retention	FALSE	non_canonical	0	0	junction_5	603.999222867455	1164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	1886	False	NA	27	True	ATTAAA	-17	NA	5071081	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078146_5078227_5078466_5078716_5082180
ES.29952.51	chr7	+	3488	4	NIC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	4427	0	intron_retention	FALSE	canonical	3	1574	junction_2	124.890173975199	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	6260	False	NA	27	True	ATTAAA	-17	NA	5075455	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.52	chr7	+	3067	4	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	4860	0	intron_retention	FALSE	canonical	0	0	junction_2	862.661385867402	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	6693	False	NA	27	True	ATTAAA	-17	NA	5075888	5082931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.6	chr7	+	2091	11	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	46	-1	intron_retention	FALSE	canonical	3	28	junction_2	528.922527408315	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCCTCATCTGTGTCC	118	False	NA	32	True	ATTAAA	-22	NA	5065187	5082936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29952.8	chr7	+	2100	11	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	49	-1	intron_retention	FALSE	canonical	0	0	junction_9	709.612824010389	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATCCTCATCTGTGTCC	121	False	NA	32	True	ATTAAA	-22	NA	5065190	5082936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ES.29952.9	chr7	+	2848	12	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	49	3	intron_retention	FALSE	canonical	3	87	junction_5	499.474715812059	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCATCTGTGTCCAGTG	121	False	NA	36	True	ATTAAA	-26	NA	5065190	5082940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ES.29953.1	chr7	+	2643	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-74	1	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	31.3495356971958	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCCCTTAAATTCT	1234	False	NA	22	True	AATAAA	-16	NA	5083159	5101178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.11	chr7	+	2496	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.1135345280822	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCCCTTAAATTCT	1314	False	NA	22	True	AATAAA	-16	NA	5083239	5101178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.13	chr7	+	2576	12	NNC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1857669394459	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1316	False	NA	21	True	AATAAA	-15	NA	5083241	5101177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095984_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.14	chr7	+	3842	10	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_2	48.3699733407788	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGGCTCCCTTAAA	1322	False	NA	18	True	AATAAA	-12	NA	5083247	5101174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5085016_5086982_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.15	chr7	+	4091	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	11	1	intron_retention	FALSE	canonical	3	82	junction_1	30.6576254788266	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCCCTTAAATTCT	1324	False	NA	22	True	AATAAA	-16	NA	5083249	5101178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5085016_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.16	chr7	+	2741	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	47	1	intron_retention	FALSE	canonical	3	22	junction_2	45.1791987534086	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGCTCCCTTAAATT	1413	False	NA	20	True	AATAAA	-14	NA	5083338	5101176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.18	chr7	+	4247	10	FSM	ENSMUSG00000035203.17	ENSMUST00000208634.2	2127	10	-2118	-2	1344	0	multi-exon	FALSE	canonical	3	89	junction_7	25.486864203224	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	701	False	NA	21	True	AATAAA	-15	NA	5084635	5101177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.19	chr7	+	1649	8	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	12547	-2	3002	0	3prime_fragment	FALSE	canonical	3	84	junction_5	24.3411132842844	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	148	False	NA	21	True	AATAAA	-15	NA	5095838	5101177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.2	chr7	+	2733	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.4569090294577	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGTGTGGCTCCCTTA	1299	False	NA	16	True	AATAAA	-10	NA	5083224	5101172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29953.20	chr7	+	1366	5	ISM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	14659	-2	5114	0	3prime_fragment	FALSE	canonical	3	84	junction_2	25.2128439490669	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	361	False	NA	21	True	AATAAA	-15	NA	5097950	5101177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.3	chr7	+	3838	11	FSM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	-67	-1437	-9	1435	multi-exon	TRUE	canonical	3	8	junction_1	46.9447547655753	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTTTGGTGGAATT	1299	False	NA	NA	False	NA	NA	NA	5083224	5102612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.4	chr7	+	2416	11	FSM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	-66	-16	-8	14	multi-exon	FALSE	canonical	3	8	junction_1	46.9447547655753	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCATCCACGGTTCA	1300	False	NA	35	True	AATAAA	-29	NA	5083225	5101191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ES.29953.5	chr7	+	2472	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.976812071818	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1300	False	NA	21	True	AATAAA	-15	NA	5083225	5101177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ES.29954.1	chr7	-	2233	1	FSM	ENSMUSG00000109274.2	ENSMUST00000207548.2	2773	1	-12	552	-12	-552	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAAGTTGAGTCTGATT	NA	False	NA	NA	False	TTTAAA	-28	NA	5065060	5062827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_5062800_5065100
ES.29955.1	chr7	-	4267	1	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5072314	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5068000_5072300
ES.29955.11	chr7	-	2923	4	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5072316	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069541_5070213_5070254_5070542_5070644_5071027
ES.29955.12	chr7	-	2121	2	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5071378	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5070032_5071241
ES.29955.15	chr7	-	1451	13	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5078673	5068072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5068146_5069058_5069175_5069391_5069536_5070206_5070254_5070542_5070644_5071027_5071181_5071729_5071790_5072440_5072558_5073358_5073497_5077573_5077658_5077731_5077855_5078137_5078224_5078464
ES.29955.16	chr7	-	2356	5	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5072319	5068072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069535_5070206_5070254_5070542_5070653_5071034_5071186_5071733
ES.29955.18	chr7	-	3311	3	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5072316	5068072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5070644_5071027_5071181_5071729
ES.29955.19	chr7	-	4111	12	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5083667	5068072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070254_5070542_5070644_5071027_5071181_5071729_5071791_5072440_5072558_5073358_5073497_5077573_5077658_5077731_5077855_5078137_5078224_5078464_5078714_5082178
ES.29955.2	chr7	-	3773	10	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5078673	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070254_5070542_5070644_5071027_5072324_5072369_5072558_5073358_5073497_5077573_5077658_5077731_5077855_5078137_5078237_5078464
ES.29955.20	chr7	-	2788	4	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATGAGAAAATTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	5072316	5068184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070254_5070542_5070644_5071027
ES.29955.21	chr7	-	2204	5	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATGAGAAAATTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	5071949	5068184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069175_5069391_5069536_5070206_5070254_5070542_5070644_5071027
ES.29955.22	chr7	-	2868	13	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATGAGAAAATTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	5082758	5068184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069175_5069391_5069536_5070206_5070254_5070542_5070644_5071027_5071181_5071729_5071790_5072440_5072558_5073358_5073497_5077577_5077658_5077731_5077855_5078137_5078224_5078464_5078714_5082178
ES.29955.23	chr7	-	3174	1	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5071380	5068206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5068200_5071400
ES.29955.25	chr7	-	2217	5	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5072316	5068206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070254_5070542_5070644_5071027_5071181_5071729
ES.29955.26	chr7	-	2508	4	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5072318	5068206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070644_5071027_5071181_5071729
ES.29955.27	chr7	-	4946	1	Antisense	novelGene_ENSMUSG00000035203.17_AS_novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAAAGCTACTTGCTAA	NA	False	NA	NA	False	NA	NA	NA	5083998	5079052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5079100_5084000
ES.29955.3	chr7	-	3212	3	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5072314	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069536_5070206_5070644_5071027
ES.29955.7	chr7	-	3918	13	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5083667	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069175_5069391_5069536_5070206_5070254_5070542_5070644_5071027_5071181_5071729_5071790_5072440_5072558_5073358_5073497_5077573_5077658_5077731_5077855_5078137_5078224_5078464_5078714_5082178
ES.29955.9	chr7	-	2276	3	Antisense	novelGene_ENSMUSG00000030435.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCGTGGTGGCGCACT	NA	False	NA	NA	False	NA	NA	NA	5071380	5068047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5069541_5070213_5070644_5071027
ES.29956.1	chr7	-	1557	2	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATTGTAACCCAGGGG	NA	False	NA	NA	False	AAAACA	-41	NA	5096311	5092082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5093167_5095838
ES.29956.2	chr7	-	4229	1	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAATTGTAACCCAGGG	NA	False	NA	NA	False	AAAACA	-40	NA	5096312	5092083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5092100_5096300
ES.29956.3	chr7	-	1726	1	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCCAATTTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	5096311	5094585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5094600_5096300
ES.29956.4	chr7	-	2068	6	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCCAATTTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	5099005	5094585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_5095961_5096306_5096384_5096895_5096980_5097950_5098256_5098640_5098747_5098884
ES.29957.1	chr7	+	3682	1	Intergenic	novelGene_24826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	5226520	5230202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_5226500_5230200
ES.29958.1	chr7	-	167	1	Intergenic	novelGene_24827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAATTTGTTATG	NA	False	NA	NA	False	NA	NA	NA	6047319	6047152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6047200_6047300
ES.29959.1	chr7	+	3631	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	-16	0	-16	0	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATGACTTCTAATTTC	2961	False	NA	21	True	AATAAA	-17	NA	6048143	6108149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ES.29959.2	chr7	+	3408	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	-5	212	-5	-212	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCTTTACTTTTAAAGA	2972	False	NA	NA	False	AATAAA	-10	NA	6048154	6107937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ES.29959.3	chr7	+	3712	11	NNC	ENSMUSG00000034690.14	novel	3615	10	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.98414572015087	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATGACTTCTAATTTC	2988	False	NA	21	True	AATAAA	-17	NA	6048170	6108149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6048221_6062986_6063095_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ES.29959.4	chr7	+	3521	10	NNC	ENSMUSG00000034690.14	novel	3615	10	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.49485420179558	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTAAGTCTGATGACT	2999	False	NA	12	True	AATAAA	-8	NA	6048181	6108140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6048221_6062986_6063095_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6101828_6102000_6103751_6103923_6107516
ES.2996.1	chr10	+	254	1	Intergenic	novelGene_2337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGTGGAGAAGAACTA	NA	False	NA	NA	False	NA	NA	NA	66915388	66915642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_66915400_66915600
ES.29960.1	chr7	+	806	1	Intergenic	novelGene_24828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTACTGTGACCAAACAC	NA	False	NA	NA	False	NA	NA	NA	6132246	6133052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6132200_6133100
ES.29961.1	chr7	-	2123	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	-225	-1	-199	1	multi-exon	FALSE	canonical	3	46	junction_1	59	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	9401	False	NA	0	True	AATAAA	-21	NA	6159195	6134488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6136171_6146060_6146150_6158843
ES.29961.10	chr7	-	622	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-261	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	64.546279693118	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCAGTGTTCCTTAG	9339	False	NA	NA	False	AATAAA	-17	NA	6159257	6145399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6145619_6146060_6146150_6158843_6158930_6159029
ES.29961.11	chr7	-	1020	2	NNC	ENSMUSG00000046792.9	novel	880	2	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGCTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	6158583	6145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6146150_6158308
ES.29961.13	chr7	-	3392	1	FSM	ENSMUSG00000108894.2	ENSMUST00000207700.2	164	1	-523	-2705	-523	2705	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAGAAAGGAAG	9624	False	NA	NA	False	NA	NA	NA	6158972	6155580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6155600_6159000
ES.29961.2	chr7	-	2058	4	NNC	ENSMUSG00000046792.9	novel	1897	3	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.2433090417717	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	9638	False	NA	0	True	AATAAA	-21	NA	6158958	6134488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6136171_6137535_6137708_6146060_6146150_6158843
ES.29961.3	chr7	-	4005	1	Genic_Genomic	ENSMUSG00000046792.9	novel	NA	NA	NA	NA	7351	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	NA	False	NA	0	True	AATAAA	-21	NA	6138493	6134488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_6134500_6138500
ES.29961.4	chr7	-	1937	4	NNC	ENSMUSG00000046792.9	novel	1897	3	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.9933330370107	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTGTTTCTTGAG	9654	False	NA	0	True	AATAAA	-21	NA	6158942	6134488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6136171_6137640_6137708_6146060_6146150_6158843
ES.29961.5	chr7	-	564	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	14	-2	-12	2	multi-exon	FALSE	canonical	3	90	junction_1	37	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCGAAGTTCATGCCG	9614	False	NA	-8	True	AATAAA	-18	NA	6158982	6145282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6145619_6146060_6146150_6158843
ES.29961.6	chr7	-	988	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-39	-69	6	2	multi-exon	FALSE	canonical	3	164	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCGAAGTTCATGCCG	9632	False	NA	-8	True	AATAAA	-18	NA	6158964	6145282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6146150_6158843
ES.29961.7	chr7	-	875	4	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-206	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	65.7723346096214	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCGAAGTTCATGCCG	9394	False	NA	-8	True	AATAAA	-18	NA	6159202	6145282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6145619_6145705_6145797_6146060_6146150_6158843
ES.29961.8	chr7	-	644	5	NNC	ENSMUSG00000046792.9	novel	576	3	NA	NA	-192	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	63.5349313370212	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCAGTGTTCCTTAG	9408	False	NA	NA	False	AATAAA	-17	NA	6159188	6145399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6145619_6145705_6145797_6146060_6146150_6158843_6158930_6159029
ES.29961.9	chr7	-	884	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	-52	48	-7	1	multi-exon	FALSE	canonical	3	164	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCAGTGTTCCTTAG	9619	False	NA	NA	False	AATAAA	-17	NA	6158977	6145399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6146150_6158843
ES.29962.1	chr7	+	1528	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	11	928	0	0	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGACTCTCCGGTGTTG	2967	False	NA	15	True	AATAAA	-24	NA	6175511	6193420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
ES.29962.10	chr7	+	5007	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	27	-3386	-24	-4	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGTTGCCTTAGTC	2994	False	NA	NA	False	NA	NA	NA	6175538	6196806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ES.29962.11	chr7	+	604	2	ISM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	39	6918	-23	0	5prime_fragment	FALSE	canonical	3	89	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTAGGTGAAGTCTGC	2995	False	NA	NA	False	AATAAA	-12	NA	6175539	6187430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6175574_6186860
ES.29962.12	chr7	+	2085	9	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.033608699392	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGTTGCCTTAGTC	2995	False	NA	NA	False	NA	NA	NA	6175539	6196806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404_6193331_6193419_6193570_6193679_6193800_6194044_6194131_6194261_6194448_6196673
ES.29962.13	chr7	+	2773	3	NNC	ENSMUSG00000044876.16	novel	701	3	NA	NA	-17	-4175	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	77.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAGCTGTCATGGTA	3001	False	NA	NA	False	NA	NA	NA	6175545	6182647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6175574_6176980_6177522_6180443
ES.29962.14	chr7	+	1663	5	NIC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	112.411075966739	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAGTCTGACTCTCCG	3022	False	NA	9	True	AATAAA	-18	NA	6175566	6193414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6175650_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ES.29962.15	chr7	+	2812	4	ISM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	238	5	179	-5	3prime_fragment	FALSE	canonical	3	144	junction_1	65.0350332940297	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	3205	False	NA	10	True	AATAAA	-19	NA	6175749	6193415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6177101_6186860_6187202_6191132_6191242_6192404
ES.29962.16	chr7	+	183	1	Intergenic	novelGene_24829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	4906	False	NA	NA	False	NA	NA	NA	6177450	6177633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6177400_6177600
ES.29962.17	chr7	+	1650	2	NNC	ENSMUSG00000044876.16	novel	411	3	NA	NA	1833	-2182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGAAATTAGATTTTT	6322	False	NA	NA	False	AATAAA	-19	NA	6178866	6184640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6179310_6183433
ES.29962.2	chr7	+	1600	5	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	137.372440831486	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	2967	False	NA	10	True	AATAAA	-19	NA	6175511	6193415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6175574_6184422_6184500_6186860_6187202_6191132_6191242_6192404
ES.29962.3	chr7	+	1648	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGACTCTCCGGTGTTG	2967	False	NA	15	True	AATAAA	-24	NA	6175511	6193420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ES.29962.4	chr7	+	2455	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	12	0	1	0	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGTTCTCGTTCTTA	2968	False	NA	NA	False	NA	NA	NA	6175512	6194348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
ES.29962.5	chr7	+	3504	5	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	1	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.692705569647	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTTCACAGAAGTAAAAC	2968	False	NA	NA	False	NA	NA	NA	6175512	6196832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404_6193570_6195004
ES.29962.6	chr7	+	1714	6	NNC	ENSMUSG00000044876.16	novel	1648	5	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	120.413620492036	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGGAGTCTGACTCTCC	2971	False	NA	8	True	AATAAA	-17	NA	6175515	6193413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6175574_6176980_6177101_6184422_6184500_6186860_6187202_6191132_6191242_6192404
ES.29962.7	chr7	+	1706	5	NIC	ENSMUSG00000044876.16	novel	5104	5	NA	NA	10	-4	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	114.333940717531	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTCTGACTCTCCGGT	2977	False	NA	11	True	AATAAA	-20	NA	6175521	6193416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6175574_6176980_6177101_6186788_6187202_6191132_6191242_6192404
ES.29962.8	chr7	+	1582	4	NIC	ENSMUSG00000044876.16	novel	2467	4	NA	NA	12	-6	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	131.864408474092	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGAGTCTGACTCTCCG	2979	False	NA	9	True	AATAAA	-18	NA	6175523	6193414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6175574_6186788_6187202_6191132_6191242_6192404
ES.29962.9	chr7	+	2556	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	20	-928	20	0	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGTTCTCGTTCTTA	2987	False	NA	NA	False	NA	NA	NA	6175531	6194348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ES.29963.1	chr7	-	137	1	Intergenic	novelGene_24830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6179398	6179261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6179300_6179400
ES.29964.1	chr7	-	4224	2	Antisense	novelGene_ENSMUSG00000044876.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	6192191	6187927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_6190639_6190678
ES.29964.2	chr7	-	4256	1	Antisense	novelGene_ENSMUSG00000044876.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6192191	6187935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_6187900_6192200
ES.29965.1	chr7	-	160	1	Intergenic	novelGene_24831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6202709	6202549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6202500_6202700
ES.29966.1	chr7	-	177	1	Intergenic	novelGene_24832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAGAGAAAGA	NA	False	NA	-9	True	NA	NA	NA	6209578	6209401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6209400_6209600
ES.29967.1	chr7	-	171	1	Intergenic	novelGene_24833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCGTCAGCTGGGGATA	NA	False	NA	0	True	NA	NA	NA	6224827	6224656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6224700_6224800
ES.29968.1	chr7	+	1801	5	NIC	ENSMUSG00000058028.15	novel	1980	6	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTATTCATTGATTGAC	3080	False	NA	NA	False	ATTAAA	-17	NA	6225276	6242417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6225336_6233070_6233538_6234335_6234537_6236813_6236968_6241497
ES.29968.2	chr7	+	2117	5	NIC	ENSMUSG00000058028.15	novel	1980	6	NA	NA	0	311	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACCCTATCTCCTTGGG	3080	False	NA	NA	False	NA	NA	NA	6225276	6242733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6225336_6233070_6233538_6234335_6234537_6236813_6236968_6241497
ES.29968.3	chr7	+	5740	4	FSM	ENSMUSG00000058028.15	ENSMUST00000165445.3	1407	4	-4107	-226	3777	-7	multi-exon	FALSE	canonical	3	6	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCTATTCATTGATTG	6874	False	NA	NA	False	ATTAAA	-15	NA	6229070	6242415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6233538_6234335_6234537_6236813_6236968_6241497
ES.29969.1	chr7	+	738	8	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3362722472422	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGATTTTTGATTCAGTG	1276	False	NA	2	True	AATAAA	-17	NA	6261598	6284854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6261630_6266897_6266933_6269287_6269345_6269828_6269869_6275974_6276002_6280418_6280541_6282412_6282451_6284466
ES.29969.10	chr7	+	2541	3	ISM	ENSMUSG00000053367.16	ENSMUST00000155248.2	684	11	14892	3	14892	-3	3prime_fragment	FALSE	canonical	3	82	junction_1	0.5	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTTTTGATTCAGTGC	979	False	NA	3	True	AATAAA	-18	NA	6278426	6284855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6280541_6282412_6282451_6284466
ES.29969.11	chr7	+	2979	1	NIC	ENSMUSG00000053367.16	novel	520	14	NA	NA	18347	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATTCAGTGCGTATT	4434	False	NA	8	True	AATAAA	-23	NA	6281881	6284860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6281900_6284900
ES.29969.2	chr7	+	981	9	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	111	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.8326059036082	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTTTTGATTCAGTGC	1400	False	NA	3	True	AATAAA	-18	NA	6261722	6284855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6261977_6266905_6266933_6269287_6269345_6269828_6269869_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ES.29969.3	chr7	+	776	6	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-446	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6189816407803	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGATTCAGTGCGTAT	2766	False	NA	7	True	AATAAA	-22	NA	6263088	6284859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6263258_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ES.29969.4	chr7	+	1029	9	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-289	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	26.4952825989835	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGATTCAGTGCGTAT	2923	False	NA	7	True	AATAAA	-22	NA	6263245	6284859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269869_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ES.29969.5	chr7	+	902	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-226	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6189816407803	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTTTTGATTCAGTGC	2986	False	NA	3	True	AATAAA	-18	NA	6263308	6284855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6263608_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ES.29969.6	chr7	+	878	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	-223	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.4854063446758	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGATTCAGTGCGTAT	2989	False	NA	7	True	AATAAA	-22	NA	6263311	6284859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6263544_6266905_6266967_6277340_6277373_6280418_6280541_6282412_6282451_6284466
ES.29969.7	chr7	+	935	8	NNC	ENSMUSG00000053367.16	novel	957	16	NA	NA	-215	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.1901239766586	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGCGTATTCAGTGA	2997	False	NA	14	True	AATAAA	-29	NA	6263319	6284866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6263544_6266905_6266933_6269287_6269345_6269828_6269869_6275974_6276002_6280418_6280541_6282412_6282451_6284466
ES.29969.8	chr7	+	708	6	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	5904	-2249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.550941065702	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTGTGTGTGTCATG	9116	False	NA	NA	False	TTTAAA	-31	NA	6269438	6282609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6269851_6275962_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6282539
ES.29969.9	chr7	+	1953	7	NNC	ENSMUSG00000053367.16	novel	684	11	NA	NA	9074	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6438514301488	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGATTTTTGATTCAG	NA	False	NA	0	True	AATAAA	-15	NA	6272608	6284852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6273394_6273836_6274405_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ES.2997.1	chr10	+	8714	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	100	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACAGTTCTCCCTCTCT	NA	False	NA	21	True	ATTAAA	-22	NA	66932003	67092105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.11	chr10	+	13042	24	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-73	2	intron_retention	FALSE	canonical	3	10	junction_4	36.7225843883405	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932110	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67090363_67091226
ES.2997.12	chr10	+	8239	24	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-73	-121	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	35.995903988784	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAGGATGTATTTTTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	66932110	67091976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.13	chr10	+	8466	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-56	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	34.8352272212419	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGGATGTTACAGTT	NA	False	NA	11	True	ATTAAA	-12	NA	66932127	67092095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.14	chr10	+	8118	25	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	41.5760472908781	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGGATGTTACAGTT	NA	False	NA	11	True	ATTAAA	-12	NA	66932131	67092095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054212_67055028_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.15	chr10	+	8231	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-48	-139	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATACATATATACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	66932135	67091958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.16	chr10	+	6044	24	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-44	-218	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	42.5112906163489	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTATTTAAAATTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	66932139	67091879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.18	chr10	+	7980	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	19	-436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	39.0042869438732	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATTGAGACAGTTACTG	NA	False	NA	NA	False	AATAAA	-18	NA	66932202	67091661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052872_67053892_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.19	chr10	+	7682	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-26	-704	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTTGTAGTAATTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	66932244	67091393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.2	chr10	+	8026	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-137	-433	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGACAGTTACTGTGA	NA	False	NA	NA	False	AATAAA	-21	NA	66932046	67091664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.20	chr10	+	6532	23	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.2210026205791	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	66932268	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051087_67056108_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.21	chr10	+	8426	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.0477575514181	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGCTGGATGTTACA	NA	False	NA	8	True	ATTAAA	-9	NA	66932269	67092092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074594_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.22	chr10	+	8461	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	47.0768902966201	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932269	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67089008_67089232_67090230_67090363_67091226
ES.2997.23	chr10	+	8306	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	1	-132	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATATACATTTAAGGA	NA	False	NA	NA	False	ATTAAA	-23	NA	66932271	67091965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.24	chr10	+	8356	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932276	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.25	chr10	+	8077	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	7	-276	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTTCAATATTTTGTTG	NA	False	NA	NA	False	CATAAA	-17	NA	66932277	67091821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.26	chr10	+	7591	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	19	-704	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	35.1364157012825	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTTGTAGTAATTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	66932289	67091393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.27	chr10	+	7707	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	22	-710	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTCTCTTTGTAGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	66932292	67091387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.28	chr10	+	8159	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	27	-139	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	34.8352272212419	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATACATATATACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	66932297	67091958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.29	chr10	+	10760	23	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	27	4	intron_retention	FALSE	canonical	0	0	junction_4	38.2210026205791	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTTACAGTTCTCCCT	NA	False	NA	17	True	ATTAAA	-18	NA	66932297	67092101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67053961_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.3	chr10	+	8429	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-105	2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932078	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.31	chr10	+	8285	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	29	-132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	40.5650095525688	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATATACATTTAAGGA	NA	False	NA	NA	False	ATTAAA	-23	NA	66932299	67091965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090370_67091226
ES.2997.32	chr10	+	975	1	NIC	ENSMUSG00000037876.18	novel	2772	3	NA	NA	31	-60746	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTAAGCTGACCTTT	NA	False	NA	NA	False	NA	NA	NA	66932301	66933276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932300_66933300
ES.2997.33	chr10	+	7804	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	38	-518	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAATCTATGCT	NA	False	NA	NA	False	TTTAAA	-20	NA	66932308	67091579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.34	chr10	+	8120	25	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	514	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	38.9097959673682	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGATGTTACAGTTC	NA	False	NA	12	True	ATTAAA	-13	NA	66932784	67092096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932887_66993685_66993851_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.35	chr10	+	8189	25	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	516	2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	37.9945171483115	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932786	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932887_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.36	chr10	+	8296	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	534	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	37.0019675152552	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932804	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932887_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.37	chr10	+	5947	21	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	542	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	48.8267088794647	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932812	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932887_66993685_66993851_67025514_67025629_67051048_67051155_67060515_67062699_67065626_67065829_67067750_67067966_67069173_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.38	chr10	+	8033	25	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	593	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	39.0255436292123	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932863	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932887_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.39	chr10	+	8316	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-745	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.343614475541	242	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	66962291	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66962399_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.4	chr10	+	7873	24	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-100	-435	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	37.0803042099503	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGAGACAGTTACTGT	NA	False	NA	NA	False	AATAAA	-19	NA	66932083	67091662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.40	chr10	+	8716	25	NIC	ENSMUSG00000037876.18	novel	8377	26	NA	NA	-465	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.403154957943	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGATGTTACAGTTC	NA	False	NA	12	True	ATTAAA	-13	NA	66962571	67092096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66963202_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.41	chr10	+	9147	25	ISM	ENSMUSG00000037876.18	ENSMUST00000174408.8	8377	26	29716	-2	-28774	2	3prime_fragment	FALSE	canonical	3	46	junction_4	33.2308581074211	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66992752	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.42	chr10	+	2225	1	Intergenic	novelGene_2339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67033199	67035424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67033200_67035400
ES.2997.43	chr10	+	5097	1	Intergenic	novelGene_2340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAACAACAACAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67038146	67043243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67038100_67043200
ES.2997.44	chr10	+	7364	19	ISM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	33202	3	1212	-3	3prime_fragment	FALSE	canonical	3	73	junction_1	19.885241751263	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	67054730	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.45	chr10	+	7057	18	NIC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	1350	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	33.3797485379496	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	67054868	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.46	chr10	+	8065	18	NIC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	1357	1	intron_retention	FALSE	canonical	3	73	junction_1	20.1916423835539	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGATGTTACAGTTCTC	NA	False	NA	14	True	ATTAAA	-15	NA	67054875	67092098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.47	chr10	+	6879	19	NNC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	1690	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	32.8039443578375	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	67055208	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079557_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.48	chr10	+	6482	19	NNC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	2100	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	32.8515178069784	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	67055618	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081942_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.49	chr10	+	5382	16	NIC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	8610	-2	intron_retention	FALSE	canonical	3	93	junction_1	16.2571010125832	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTACAGTTCTCCCTCT	NA	False	NA	19	True	ATTAAA	-20	NA	67062128	67092103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67085586_67090230_67090363_67091226
ES.2997.5	chr10	+	8189	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-98	-435	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGAGACAGTTACTGT	NA	False	NA	NA	False	AATAAA	-19	NA	66932085	67091662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.50	chr10	+	3328	16	ISM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	44097	0	-8301	0	3prime_fragment	FALSE	canonical	3	99	junction_6	15.3051915665531	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	13	True	ATTAAA	-14	NA	67065625	67092097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.51	chr10	+	3743	13	NNC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	-1004	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.2278084531204	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	67072922	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076421_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.52	chr10	+	2756	13	ISM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	52356	3	-42	-3	3prime_fragment	FALSE	canonical	3	99	junction_3	16.2677253753833	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCTGGATGTTACAGT	NA	False	NA	10	True	ATTAAA	-11	NA	67073884	67092094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.53	chr10	+	5771	8	NIC	ENSMUSG00000037876.18	novel	8609	25	NA	NA	1030	-139	intron_retention	FALSE	canonical	3	103	junction_2	18.4910347830223	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATACATATATACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	67075730	67091958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_67075856_67076441_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.6	chr10	+	8521	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-86	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.4310075298714	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGGATGTTACAGTT	NA	False	NA	11	True	ATTAAA	-12	NA	66932097	67092095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993695_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.7	chr10	+	8488	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-85	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	35.1364157012825	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	False	NA	15	True	ATTAAA	-16	NA	66932098	67092099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.8	chr10	+	8195	26	NNC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-85	-436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	41.1616520562526	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATTGAGACAGTTACTG	NA	False	NA	NA	False	AATAAA	-18	NA	66932098	67091661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076421_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.2997.9	chr10	+	7938	24	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-83	-432	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	35.995903988784	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGACAGTTACTGTGAG	NA	False	NA	NA	False	AATAAA	-22	NA	66932100	67091665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_66932498_66993685_66993851_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ES.29970.1	chr7	-	176	1	Intergenic	novelGene_24834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAACAAAGTG	NA	False	NA	NA	False	NA	NA	NA	6265117	6264941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6264900_6265100
ES.29971.1	chr7	+	3850	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	-385	207	-385	-6	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGAGGTTCTTTTACA	2587	False	NA	NA	False	AATAAA	-31	NA	6289192	6310675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ES.29971.2	chr7	+	3620	6	NNC	ENSMUSG00000054893.16	novel	3498	5	NA	NA	-39	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0957706993288	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAAGAGGTTCTTTTA	2933	False	NA	NA	False	AATAAA	-29	NA	6289538	6310673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6289654_6290851_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ES.29971.3	chr7	+	3502	5	NNC	ENSMUSG00000054893.16	novel	3672	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	18.389874931603	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGGTTCTTTTACAT	2973	False	NA	NA	False	AATAAA	-32	NA	6289578	6310676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6289654_6292356_6292437_6293534_6293699_6296847_6296941_6307586
ES.29971.4	chr7	+	711	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	19	2942	5	-2741	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGTGGGGACATTTTT	2991	False	NA	NA	False	NA	NA	NA	6289596	6307940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ES.29971.5	chr7	+	4749	5	FSM	ENSMUSG00000054893.16	ENSMUST00000108562.2	3498	5	-1266	15	9	-15	multi-exon	FALSE	canonical	3	18	junction_1	14.0245320777557	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATTATATACAAAGAGGT	2995	False	NA	NA	False	AATAAA	-22	NA	6289600	6310666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ES.29971.6	chr7	+	3550	6	NNC	ENSMUSG00000054893.16	novel	3498	5	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	18.2822318112423	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTTTTACATGTTCTCT	2996	False	NA	NA	False	AATAAA	-39	NA	6289601	6310683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6289654_6290868_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ES.29971.7	chr7	+	2746	6	NNC	ENSMUSG00000054893.16	novel	3672	5	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.2665513260677	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTATATACAAAGAGGTT	3006	False	NA	NA	False	AATAAA	-23	NA	6289611	6310667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586_6309684_6310360
ES.29971.8	chr7	+	3192	2	NNC	ENSMUSG00000054893.16	novel	3672	5	NA	NA	9503	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGATTATATACAAAGAG	NA	False	NA	NA	False	AATAAA	-20	NA	6303035	6310664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6303150_6307586
ES.29972.1	chr7	-	2349	1	Intergenic	novelGene_24835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGTTTCCATATGACTC	NA	False	NA	NA	False	NA	NA	NA	6296696	6294347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6294300_6296700
ES.29973.1	chr7	-	175	1	Intergenic	novelGene_24836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAAATTAAACATCTCA	NA	False	NA	NA	False	NA	NA	NA	6305457	6305282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6305300_6305500
ES.29974.1	chr7	-	203	1	Intergenic	novelGene_24837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCTGGGTAGCTCAAGC	NA	False	NA	NA	False	AAAAAG	-5	NA	6314130	6313927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6313900_6314100
ES.29975.1	chr7	-	2544	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	2	4	2	-4	multi-exon	FALSE	canonical	3	15	junction_1	5.61248608016091	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTTGATTATTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	6334282	6318662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
ES.29975.2	chr7	-	2574	6	NNC	ENSMUSG00000030443.17	novel	2550	5	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.5640901169954	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAGAGTTGATTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	6334200	6318665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6320779_6326645_6326742_6328451_6328579_6330548_6330664_6332253_6332316_6334139
ES.29975.3	chr7	-	2070	6	NNC	ENSMUSG00000030443.17	novel	2550	5	NA	NA	8	126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.4	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGAATTTTGGTCATA	NA	False	NA	NA	False	NA	NA	NA	6334195	6319148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6320779_6326645_6326745_6328451_6328579_6330567_6330664_6332253_6332316_6334139
ES.29976.1	chr7	-	3846	1	Intergenic	novelGene_24838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGTGGGGCGGGGA	NA	False	NA	NA	False	NA	NA	NA	6339348	6335502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6335500_6339300
ES.29977.1	chr7	+	2585	6	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	-62	-344	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6.92820323027551	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTTTGTGTGTGTG	2950	False	NA	7	True	ATTAAA	-15	NA	6346695	6358611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420_6358337_6358419
ES.29977.2	chr7	+	2258	3	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	-58	-352	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAATCTGTGTGTTTG	2954	False	NA	-1	True	ATTAAA	-7	NA	6346699	6358603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6346862_6356420_6358337_6358423
ES.29977.3	chr7	+	3618	1	NIC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	5	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3017	False	NA	NA	False	AAAACA	-23	NA	6346762	6350380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6346800_6350400
ES.29977.4	chr7	+	2942	5	FSM	ENSMUSG00000109398.3	ENSMUST00000207173.3	2950	5	5	3	5	-3	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCATGCATGGTGGTGC	3017	False	NA	NA	False	AATGAA	-37	NA	6346762	6358952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420
ES.29977.5	chr7	+	3751	4	NIC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	5	-348	intron_retention	FALSE	canonical	3	12	junction_1	2.49443825784929	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTGTGTGTTTGTGTG	3017	False	NA	3	True	ATTAAA	-11	NA	6346762	6358607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6346862_6349343_6349432_6351435_6352813_6356420
ES.29977.6	chr7	+	2596	5	FSM	ENSMUSG00000109398.3	ENSMUST00000207173.3	2950	5	5	349	5	-349	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTGTGTTTGTGT	3017	False	NA	2	True	ATTAAA	-10	NA	6346762	6358606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420
ES.29977.7	chr7	+	2295	7	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	5	-349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.96694560181141	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTGTGTTTGTGT	3017	False	NA	2	True	ATTAAA	-10	NA	6346762	6358606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420_6357953_6358198_6358337_6358391
ES.29977.8	chr7	+	2676	7	NNC	ENSMUSG00000109398.3	novel	2950	5	NA	NA	-2	-349	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	8.43932593411478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTGTGTTTGTGT	3020	False	NA	2	True	ATTAAA	-10	NA	6346765	6358606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6346862_6349091_6349257_6349343_6349432_6351435_6351563_6352716_6352813_6356420_6358338_6358419
ES.29978.1	chr7	-	154	1	Intergenic	novelGene_24839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	6351186	6351032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6351000_6351200
ES.29979.1	chr7	+	112	1	Intergenic	novelGene_24840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTCTTATATTTTGGT	1363	False	NA	NA	False	NA	NA	NA	6364687	6364799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6364700_6364800
ES.2998.1	chr10	-	5383	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.3869167005964	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTATTTTTTTTTCT	NA	False	NA	0	True	AATAAA	-23	NA	66932725	66844968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.10	chr10	-	2774	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-30	2686	-30	-203	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAATCTTGTATCTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	66932754	66847653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.11	chr10	-	2286	10	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-16	-203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.484295757729	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAATCTTGTATCTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	66932740	66847653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848265_66848311_66848876_66849302_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.12	chr10	-	2696	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-1	-205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3869167005964	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTAATCTTGTATCTC	NA	False	NA	NA	False	AATAAA	-20	NA	66932725	66847655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.13	chr10	-	1612	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-1	3819	-1	-1336	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTAGTCTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	66932725	66848786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.14	chr10	-	1107	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	0	4323	0	-1840	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGTGACCGAGAATC	NA	False	NA	NA	False	NA	NA	NA	66932724	66849290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.15	chr10	-	946	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-11	4495	-11	-2012	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCATTTTCTAACCTGA	NA	False	NA	-12	True	AATAAA	-14	NA	66932735	66849462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.16	chr10	-	761	6	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	720	-2012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.3634508346034	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCATTTTCTAACCTGA	NA	False	NA	-12	True	AATAAA	-14	NA	66872381	66849462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66872249
ES.2998.17	chr10	-	1322	6	NIC	ENSMUSG00000019873.9	novel	838	3	NA	NA	-27	-7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	65.7346179725721	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGGGTTGACATCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	66932751	66864711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_66865466_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.18	chr10	-	9744	3	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	-7	-18148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCCAGCTGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	66932731	66889145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66896538_66896661_66898851_66932568
ES.2998.19	chr10	-	2384	2	Intergenic	novelGene_2334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCCAGCTGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	66891688	66889145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66891137_66891295
ES.2998.2	chr10	-	4952	4	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	17666	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	75.6703376495705	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTATTTTTTTTTC	NA	False	NA	-1	True	AATAAA	-22	NA	66852745	66844969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848261_66848309_66849566_66850680_66850827_66852486
ES.2998.20	chr10	-	1850	1	Intergenic	novelGene_2335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAGTATTTGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	66894917	66893067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66893100_66894900
ES.2998.21	chr10	-	4404	1	NIC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	2	-57321	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTTGATCACTT	NA	False	NA	NA	False	TTTAAA	-6	NA	66932722	66928318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_66928300_66932700
ES.2998.3	chr10	-	5437	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-9	2	-9	-2	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTATTTTTTTTTC	NA	False	NA	-1	True	AATAAA	-22	NA	66932733	66844969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.5	chr10	-	4994	3	NNC	ENSMUSG00000019873.9	novel	5430	8	NA	NA	17665	-10	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	79.5	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGCAGCTGAGTATT	NA	False	NA	-9	True	AATAAA	-14	NA	66852746	66844977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66849566_66850680_66850827_66852486
ES.2998.6	chr10	-	5415	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-44	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.3869167005964	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGGCAGCTGAGTATT	NA	False	NA	-9	True	AATAAA	-14	NA	66932768	66844977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848273_66848321_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.7	chr10	-	4294	9	NNC	ENSMUSG00000019873.9	novel	2925	9	NA	NA	-16	-1105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3869167005964	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTTTCTTTTTCC	NA	False	NA	NA	False	TATAAA	-15	NA	66932740	66846072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_66848265_66848311_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.8	chr10	-	3128	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	1	2301	1	182	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGTTAAAACAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	66932723	66847268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.2998.9	chr10	-	2863	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	-1	2568	-1	-85	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCATTTCTCATGAAC	NA	False	NA	NA	False	AATAAA	-14	NA	66932725	66847535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ES.29980.1	chr7	+	8239	10	Fusion	ENSMUSG00000062861.9_ENSMUSG00000055150.16	novel	4447	7	NA	NA	-130	1076	multi-exon	FALSE	canonical	2	6	junction_3	4.73234209756597	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGCCTGAGATGTGTT	2824	False	NA	NA	False	TATAAA	-15	NA	6366148	6398204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_6366347_6374304_6374396_6376125_6376253_6381207_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ES.29980.10	chr7	+	5825	6	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	14	-229	intron_retention	FALSE	canonical	3	6	junction_3	4.4988887516808	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTCTCATGAAAGATAT	2973	False	NA	NA	False	ATTAAA	-27	NA	6386307	6399685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6395296_6396365
ES.29980.11	chr7	+	4345	6	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	15	1078	intron_retention	FALSE	canonical	3	6	junction_3	4.4988887516808	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCTGAGATGTGTTTA	2974	False	NA	NA	False	TATAAA	-17	NA	6386308	6398206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6395296_6396365
ES.29980.12	chr7	+	4133	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	27	287	27	-287	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGTATATGTAGA	2986	False	NA	NA	False	AATAAA	-7	NA	6386320	6399627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ES.29980.13	chr7	+	4407	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	39	1	39	-1	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGTTTTGTGTGTGTGT	2998	False	NA	NA	False	NA	NA	NA	6386332	6399913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ES.29980.14	chr7	+	4350	7	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	45	1066	intron_retention	FALSE	canonical	0	0	junction_2	7.97217382873426	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCACTGGTTAATGCCT	3004	False	NA	NA	False	TATAAA	-5	NA	6386338	6398194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6386601_6387173_6387266_6387343_6387391_6392431_6392559_6392752_6392849_6393398_6395296_6396365
ES.29980.15	chr7	+	4959	6	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	59	-2	intron_retention	FALSE	canonical	3	6	junction_2	4.58693797647189	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGGTTTTGTGTGTGTG	3018	False	NA	NA	False	NA	NA	NA	6386352	6399912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ES.29980.16	chr7	+	3120	5	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	78	1079	intron_retention	FALSE	canonical	0	0	junction_4	6.68487097856047	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGAGATGTGTTTAG	3037	False	NA	NA	False	TATAAA	-18	NA	6386371	6398207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6396365
ES.29980.17	chr7	+	2498	6	NNC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	96	1077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.96850055607374	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCCTGAGATGTGTTT	3055	False	NA	NA	False	TATAAA	-16	NA	6386389	6398205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6386601_6387173_6387266_6392769_6392849_6393398_6393560_6395180_6395296_6396365
ES.29980.18	chr7	+	4072	5	NIC	ENSMUSG00000062861.9	novel	4447	7	NA	NA	-42	1076	intron_retention	FALSE	canonical	0	0	junction_1	7.82623792124926	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATGCCTGAGATGTGTT	3153	False	NA	NA	False	TATAAA	-15	NA	6386487	6398204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6386601_6392431_6392559_6392752_6392849_6393398_6395296_6396365
ES.29980.2	chr7	+	3114	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	8	761	8	31	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGATTGTGGCTGTGTTT	2962	False	NA	NA	False	AATAAA	-23	NA	6366286	6383947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ES.29980.3	chr7	+	1322	5	ISM	ENSMUSG00000055150.16	ENSMUST00000208763.2	609	6	-38	1919	14	-1919	5prime_fragment	FALSE	canonical	0	0	junction_1	9.57535900110278	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATACCGTTCTCC	2968	False	NA	NA	False	NA	NA	NA	6366292	6379420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6366347_6373957_6374105_6374304_6374396_6376125_6376253_6378517
ES.29980.4	chr7	+	4762	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	16	-895	-14	-1	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCGCTTCCCCGTTTCT	2970	False	NA	NA	False	NA	NA	NA	6366294	6385603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ES.29980.5	chr7	+	1157	4	ISM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	33	5287	3	-1918	5prime_fragment	FALSE	canonical	2	8	junction_1	6.34209919681348	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATACCGTTCTCCT	2987	False	NA	NA	False	NA	NA	NA	6366311	6379421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517
ES.29980.6	chr7	+	1961	6	NNC	ENSMUSG00000055150.16	novel	609	6	NA	NA	-8	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.32952303175248	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCATTGGTGAGTTCTTG	2998	False	NA	NA	False	AGTAAA	-15	NA	6366322	6382667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6366363_6373957_6374105_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ES.29980.7	chr7	+	2241	6	FSM	ENSMUSG00000055150.16	ENSMUST00000208763.2	609	6	-7	-1625	-7	57	multi-exon	FALSE	canonical	0	0	junction_1	9.32952303175248	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTGACTGTATTAAG	2999	False	NA	NA	False	CATAAA	-11	NA	6366323	6382964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6366347_6373957_6374105_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ES.29980.8	chr7	+	1820	5	NNC	ENSMUSG00000055150.16	novel	2169	5	NA	NA	-13	-1918	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.57535900110278	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATACCGTTCTCCT	3041	False	NA	NA	False	NA	NA	NA	6366365	6379421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6366917_6373957_6374105_6374304_6374396_6376125_6376253_6378517
ES.29980.9	chr7	+	3303	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	-15	1159	-15	-1159	multi-exon	FALSE	canonical	3	6	junction_3	4.21966296705739	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCACGGGTTTGTGAAT	2944	False	NA	NA	False	AATAAA	-22	NA	6386278	6398755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ES.29981.1	chr7	-	173	1	Intergenic	novelGene_24841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	6372384	6372211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6372200_6372400
ES.29982.1	chr7	+	1446	3	NNC	ENSMUSG00000093536.8	novel	453	3	NA	NA	1	-7010	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGGCAATGTCTGTTC	3001	False	NA	NA	False	AATAAA	-14	NA	6401714	6404532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6401762_6402782_6404034_6404384
ES.29983.1	chr7	-	4515	2	NNC	ENSMUSG00000048067.9	novel	875	2	NA	NA	-19926	-3656	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6545875	6521596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6526018_6545781
ES.29984.1	chr7	-	1766	1	Intergenic	novelGene_24842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAATAGTCCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	6554284	6552518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6552500_6554300
ES.29985.1	chr7	-	7258	1	Intergenic	novelGene_24843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTATATTGTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	6582587	6575329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6575300_6582600
ES.29986.1	chr7	+	6454	1	Intergenic	novelGene_24844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAATGGGAACAA	NA	False	NA	NA	False	NA	NA	NA	6593972	6600426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6594000_6600400
ES.29987.1	chr7	+	2576	9	Antisense	novelGene_ENSMUSG00000002265.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCAGACACCCCCTT	NA	False	NA	NA	False	NA	NA	NA	6712876	6730269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_6714729_6714847_6714942_6715670_6715774_6719051_6719156_6720110_6720191_6720792_6720888_6721424_6721555_6729487_6729574_6730237
ES.29987.2	chr7	+	3683	1	Antisense	novelGene_ENSMUSG00000002265.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGGGGGGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	6712876	6716559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_6712900_6716600
ES.29988.1	chr7	-	8744	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	-50	0	-40	0	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTCTCTTCCTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	6733470	6706890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
ES.29988.10	chr7	-	639	2	FSM	ENSMUSG00000002265.18	ENSMUST00000155910.3	4816	2	10	4167	0	-4167	multi-exon	FALSE	canonical	3	104	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATACGATTGTATGGT	NA	False	NA	NA	False	ATTAAA	-5	NA	6733420	6729098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6729574_6733256
ES.29988.3	chr7	-	8885	11	NNC	ENSMUSG00000002265.18	novel	3252	10	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.1417036372635	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTCTCAGTCTCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	6733419	6706894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6727906_6727951_6728370_6728523_6729488_6729574_6733256
ES.29988.4	chr7	-	11394	9	NNC	ENSMUSG00000002265.18	novel	8694	9	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	31.1157114654317	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTCTCAGTCTCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	6733417	6706895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6726780_6729574_6733256
ES.29988.5	chr7	-	8997	12	NNC	ENSMUSG00000002265.18	novel	8694	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	45.4738140977315	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTCTCAGTCTCTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	6733420	6706895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6726780_6726902_6727462_6727498_6728370_6728523_6729488_6729574_6733256
ES.29988.6	chr7	-	9035	11	NNC	ENSMUSG00000002265.18	novel	3252	10	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	43.4009216492	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAATTCTCAGTCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	6733448	6706897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6726780_6726902_6728323_6728523_6729488_6729574_6733256
ES.29988.7	chr7	-	8907	9	NNC	ENSMUSG00000002265.18	novel	8694	9	NA	NA	2553	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.7900518450337	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	6730865	6706918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6730460
ES.29988.8	chr7	-	5930	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	4	2760	2	2743	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTTCTTTAAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	6733416	6709650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
ES.29988.9	chr7	-	5518	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	-19	3195	-9	2308	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGGATTTAGTGTGC	NA	False	NA	NA	False	TATAAA	-20	NA	6733439	6710085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
ES.29989.1	chr7	+	1810	1	ISM	ENSMUSG00000051527.12	ENSMUST00000207899.2	4348	3	37385	0	32634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCTAACAATTCAATGT	NA	False	NA	NA	False	NA	NA	NA	6771328	6773138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6771300_6773100
ES.2999.1	chr10	-	596	1	Intergenic	novelGene_2338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAACA	NA	False	NA	NA	False	NA	NA	NA	66981508	66980912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_66980900_66981500
ES.29990.1	chr7	-	177	1	Intergenic	novelGene_24845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGACATTACAC	NA	False	NA	NA	False	NA	NA	NA	6902011	6901834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_6901800_6902000
ES.29991.1	chr7	+	205	1	Intergenic	novelGene_24846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACGGTACCCCATTTTT	1989	False	NA	NA	False	NA	NA	NA	6954206	6954411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6954200_6954400
ES.29992.1	chr7	+	3709	3	ISM	ENSMUSG00000051527.12	ENSMUST00000198068.3	4420	5	4613	255	4613	-255	3prime_fragment	FALSE	canonical	1	1	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTTGTGATTCATC	2996	False	NA	NA	False	ATTAAA	-14	NA	6955213	6967569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6955297_6962961_6963149_6964130
ES.29992.2	chr7	+	196	1	Intergenic	novelGene_24847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATCTGCTATCCCA	4287	False	NA	NA	False	NA	NA	NA	6956504	6956700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_6956500_6956700
ES.29992.3	chr7	+	3717	3	NNC	ENSMUSG00000051527.12	novel	7540	9	NA	NA	-5343	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTTGTGATTCATC	6598	False	NA	NA	False	ATTAAA	-14	NA	6958815	6967569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6958907_6962961_6963149_6964130
ES.29993.1	chr7	+	4222	7	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-174	1091	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.0657918651588	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTAGTCTGTTTGTGAT	2980	False	NA	NA	False	NA	NA	NA	6980070	6995177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988152_6988640_6988730_6989101_6989202_6991881
ES.29993.10	chr7	+	2648	7	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-132	277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.2507861402006	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTCCCAGACAAACCTA	3022	False	NA	7	True	AATAAA	-16	NA	6980112	6993544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987998_6988152_6988640_6988730_6989101_6989202_6991881
ES.29993.11	chr7	+	4026	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-125	1087	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTAGTCTGTTTG	3029	False	NA	NA	False	NA	NA	NA	6980119	6995173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
ES.29993.12	chr7	+	3929	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-119	-28	intron_retention	FALSE	non_canonical	0	0	junction_5	13.3626344707921	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCAAAATTTTTTC	3035	False	NA	2	True	AATAAA	-13	NA	6980125	6994058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987994_6989202_6991881_6992745_6992829
ES.29993.13	chr7	+	3716	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-65	-28	intron_retention	FALSE	non_canonical	0	0	junction_4	12.794041581924	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCAAAATTTTTTC	3089	False	NA	2	True	AATAAA	-13	NA	6980179	6994058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6989202_6991881_6992745_6992829
ES.29993.14	chr7	+	2877	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-46	-28	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	9.43186089804128	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCAAAATTTTTTC	3108	False	NA	2	True	AATAAA	-13	NA	6980198	6994058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988143_6989101_6989202_6991881
ES.29993.15	chr7	+	3833	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-43	-28	intron_retention	FALSE	canonical	2	12	junction_3	9.01041064547005	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCAAAATTTTTTC	3111	False	NA	2	True	AATAAA	-13	NA	6980201	6994058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6989202_6991881
ES.29993.16	chr7	+	2325	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-40	290	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTATGGCACTGTGATA	3114	False	NA	20	True	AATAAA	-29	NA	6980204	6993557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
ES.29993.17	chr7	+	4797	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-29	1089	intron_retention	FALSE	non_canonical	0	0	junction_4	12.794041581924	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTAGTCTGTTTGTG	3125	False	NA	NA	False	NA	NA	NA	6980215	6995175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6989202_6991881_6992745_6992829
ES.29993.18	chr7	+	4051	7	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-16	1087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.2429117814713	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTAGTCTGTTTG	3138	False	NA	NA	False	NA	NA	NA	6980228	6995173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988143_6988640_6988730_6989101_6989202_6991881
ES.29993.19	chr7	+	5022	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-12	1087	intron_retention	FALSE	canonical	1	1	junction_3	12.4398553046247	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTAGTCTGTTTG	3142	False	NA	NA	False	NA	NA	NA	6980232	6995173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987994_6989202_6991881
ES.29993.2	chr7	+	3152	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-164	15	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	11.3419575030063	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGGTGGACTCCTT	2990	False	NA	45	True	ATTAAA	-16	NA	6980080	6994101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985477_6987994_6988152_6989101_6989202_6991881
ES.29993.20	chr7	+	3135	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	11	286	intron_retention	FALSE	non_canonical	0	0	junction_4	12.794041581924	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAACCTATGGCACTGT	3165	False	NA	16	True	AATAAA	-25	NA	6980255	6993553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6989202_6991881_6992745_6992829
ES.29993.21	chr7	+	3614	7	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	14	-28	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	11.8696625431766	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTTCAAAATTTTTTC	3168	False	NA	2	True	AATAAA	-13	NA	6980258	6994058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988730_6988808_6989019_6989101_6989202_6991881
ES.29993.22	chr7	+	1828	3	ISM	ENSMUSG00000109176.2	ENSMUST00000208781.2	2801	5	7852	523	3895	296	3prime_fragment	FALSE	canonical	3	9	junction_1	12	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCACTGTGATATCGACT	NA	False	NA	26	True	AATAAA	-35	NA	6988096	6993563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_6988143_6989101_6989202_6991881
ES.29993.23	chr7	+	1923	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	3918	290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.89711431702997	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTATGGCACTGTGATA	NA	False	NA	20	True	AATAAA	-29	NA	6988119	6993557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6988143_6989101_6989202_6990700_6990910_6991881_6992745_6992829
ES.29993.3	chr7	+	5014	4	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-163	1087	intron_retention	FALSE	canonical	3	27	junction_1	2.82842712474619	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATGGTAGTCTGTTTG	2991	False	NA	NA	False	NA	NA	NA	6980081	6995173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6989202_6991881
ES.29993.4	chr7	+	3978	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-163	1086	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	11.9666202413213	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGATGGTAGTCTGTTT	2991	False	NA	NA	False	NA	NA	NA	6980081	6995172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881_6992745_6992829
ES.29993.5	chr7	+	4121	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-162	1091	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	8.7086164228309	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTAGTCTGTTTGTGAT	2992	False	NA	NA	False	NA	NA	NA	6980082	6995177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988152_6989101_6989202_6991881
ES.29993.6	chr7	+	3129	6	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-159	293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.7132403714771	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGCACTGTGATATCG	2995	False	NA	23	True	AATAAA	-32	NA	6980085	6993560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6988319_6988640_6989202_6991881
ES.29993.7	chr7	+	3425	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-147	279	intron_retention	FALSE	canonical	2	12	junction_3	9.01041064547005	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCCCAGACAAACCTATG	3007	False	NA	9	True	AATAAA	-18	NA	6980097	6993546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6989202_6991881
ES.29993.9	chr7	+	2925	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-138	-27	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	7.34846922834953	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTCAAAATTTTTTCA	3016	False	NA	3	True	AATAAA	-14	NA	6980106	6994059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6980472_6984231_6984357_6987994_6988152_6989101_6989202_6991881
ES.29994.1	chr7	-	4841	5	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	0	-3671	intron_retention	FALSE	canonical	2	7	junction_4	4.15331193145904	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACTCCACAGGCAA	NA	False	NA	NA	False	AATAAA	-12	NA	6980419	6962354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6978232_6978301_6980219
ES.29994.2	chr7	-	3115	4	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	20	2451	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.92160768674447	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAAGTGTGTGTGTG	NA	False	NA	NA	False	CATAAA	-28	NA	6980399	6963882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_6966692_6968979_6969038_6978232_6978301_6980219
ES.29994.3	chr7	-	3166	4	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	54	2426	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	5.09901951359278	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTACTTATATCCTT	NA	False	NA	NA	False	CATAAA	-3	NA	6980365	6963907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6980219
ES.29994.4	chr7	-	3297	5	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	-9	2426	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	4.15331193145904	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTACTTATATCCTT	NA	False	NA	NA	False	CATAAA	-3	NA	6980428	6963907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6978232_6978301_6980219
ES.29994.5	chr7	-	3030	4	NNC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	1466	2367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTATGGAAAAAATTTA	NA	False	NA	NA	False	AGTAAA	-26	NA	6976997	6963966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_6966692_6968979_6969038_6976160_6976339_6976928
ES.29994.6	chr7	-	2275	5	NIC	ENSMUSG00000108043.3	novel	3226	7	NA	NA	160	1573	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	4.15331193145904	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGTCAGGAGTATT	NA	False	NA	NA	False	NA	NA	NA	6980259	6964760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_6966692_6968979_6969038_6976160_6976339_6978232_6978301_6980219
ES.29995.1	chr7	+	1138	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	158.962195480047	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTCTTGCTTGAGTG	2835	False	NA	16	True	ATTAAA	-17	NA	6998422	7006086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998525_6998659_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.10	chr7	+	1204	8	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	174.695653719752	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTCTTGCTTGAGTG	2914	False	NA	16	True	ATTAAA	-17	NA	6998501	7006086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998548_6998659_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.11	chr7	+	1001	6	NIC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	147.489118242669	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2917	False	NA	18	True	ATTAAA	-19	NA	6998504	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6998712_6999266_6999301_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.12	chr7	+	1182	7	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	166.401789520292	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2976	False	NA	18	True	ATTAAA	-19	NA	6998563	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002929_7003127_7005355_7005531_7005791
ES.29995.13	chr7	+	1154	5	NIC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	237	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	162.64435895536	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTCTTGCTTGAGTG	3317	False	NA	16	True	ATTAAA	-17	NA	6998904	7006086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6999301_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.2	chr7	+	1089	7	FSM	ENSMUSG00000070837.7	ENSMUST00000086248.8	1154	7	63	2	-57	1	multi-exon	FALSE	canonical	2	17	junction_1	169.856802434678	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2857	False	NA	18	True	ATTAAA	-19	NA	6998444	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6998548_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.3	chr7	+	1244	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	156	1	-47	-1	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2867	False	NA	19	True	ATTAAA	-20	NA	6998454	7006089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.4	chr7	+	913	6	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	162.636281315087	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2874	False	NA	18	True	ATTAAA	-19	NA	6998461	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998525_6998614_6998705_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.5	chr7	+	1353	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	-35	2	-35	1	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2879	False	NA	18	True	ATTAAA	-19	NA	6998466	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.6	chr7	+	1120	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	180.396388940736	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCAATATTCTTGCTTG	2887	False	NA	12	True	ATTAAA	-13	NA	6998474	7006082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998525_6998614_6998705_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.7	chr7	+	1767	6	NIC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	-16	1	intron_retention	FALSE	canonical	2	56	junction_5	137.89706305792	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCTTGCTTGAGTGAG	2898	False	NA	18	True	ATTAAA	-19	NA	6998485	7006088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.8	chr7	+	1270	8	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	181.500885475998	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTTGCTTGAGTGAGT	2905	False	NA	19	True	ATTAAA	-20	NA	6998492	7006089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998548_6998659_6998834_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29995.9	chr7	+	1190	7	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	172.381037884746	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAATATTCTTGCTTGAG	2909	False	NA	14	True	ATTAAA	-15	NA	6998496	7006084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_6998705_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ES.29996.1	chr7	-	2822	6	Fusion	ENSMUSG00000062116.11_ENSMUSG00000063535.8	novel	2042	5	NA	NA	6005	0	multi-exon	FALSE	canonical	3	3	junction_5	20.5270553173123	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAATGACTCTTGAGGT	3027	False	NA	-5	True	AATAAA	-21	NA	7133718	7117688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221_7125093_7133543
ES.29996.10	chr7	-	2979	4	NNC	ENSMUSG00000063535.8	novel	3028	4	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.41629792788369	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGTGGTTGCGTCTTT	NA	False	NA	NA	False	NA	NA	NA	7139743	7133674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7136168_7137165_7137250_7138327_7138418_7139431
ES.29996.11	chr7	-	4025	3	ISM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	11	6	11	-6	intron_retention	FALSE	canonical	3	13	junction_1	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTGGTGGTTGCG	NA	False	NA	NA	False	NA	NA	NA	7139743	7133679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7136168_7137165_7137250_7138290
ES.29996.12	chr7	-	5044	2	ISM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	33	6	2	-6	intron_retention	FALSE	canonical	3	13	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTGGTGGTTGCG	NA	False	NA	NA	False	NA	NA	NA	7139721	7133679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7136168_7137165
ES.29996.13	chr7	-	2243	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	15	770	15	-770	multi-exon	FALSE	canonical	3	13	junction_1	4.32049379893857	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTGCTTTCTTGGGTA	NA	False	NA	NA	False	NA	NA	NA	7139739	7134443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
ES.29996.14	chr7	-	2166	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	-9	871	-9	-871	multi-exon	FALSE	canonical	3	13	junction_1	4.32049379893857	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGACTATTGTGTACTTA	NA	False	NA	NA	False	GATAAA	-22	NA	7139763	7134544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
ES.29996.15	chr7	-	4240	2	ISM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	-29	872	-29	-872	intron_retention	FALSE	canonical	3	13	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTATTGTGTACTT	NA	False	NA	NA	False	GATAAA	-21	NA	7139783	7134545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7136168_7137165
ES.29996.2	chr7	-	5262	3	ISM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	49	2	6	-2	intron_retention	FALSE	canonical	3	53	junction_1	2.5	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTAATGACTCTTGAG	6285	False	NA	-7	True	AATAAA	-19	NA	7124438	7117690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7119200_7119611_7119711_7120784
ES.29996.3	chr7	-	1864	4	NIC	ENSMUSG00000062116.11	novel	2042	5	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	23.3380947522857	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTAATGACTCTTGAG	6285	False	NA	-7	True	AATAAA	-19	NA	7124438	7117690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7119200_7119611_7119711_7122370_7122410_7124221
ES.29996.4	chr7	-	3460	4	NIC	ENSMUSG00000062116.11	novel	2042	5	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	53	junction_1	2.16024689946929	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTAATGACTCTTGAG	6275	False	NA	-7	True	AATAAA	-19	NA	7124448	7117690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7119200_7119611_7119711_7120784_7122410_7124221
ES.29996.5	chr7	-	5703	4	ISM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	-1852	3	-1852	-3	intron_retention	FALSE	canonical	3	51	junction_3	2.94392028877595	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTTAATGACTCTTGA	4384	False	NA	-8	True	AATAAA	-18	NA	7126339	7117691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370
ES.29996.6	chr7	-	3725	1	NIC	ENSMUSG00000063535.8	novel	4073	4	NA	NA	5927	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	2949	False	NA	NA	False	NA	NA	NA	7133796	7130071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7130100_7133800
ES.29996.7	chr7	-	1121	2	NNC	ENSMUSG00000063535.8	novel	4073	4	NA	NA	6003	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGTGGTTGCGTCTT	3025	False	NA	NA	False	NA	NA	NA	7133720	7130075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7131020_7133543
ES.29996.8	chr7	-	3011	5	NNC	ENSMUSG00000063535.8	novel	3028	4	NA	NA	14	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.03811374126261	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAACTGGTGGTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	7139740	7130077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7130271_7133869_7136168_7137165_7137250_7138290_7138418_7139431
ES.29996.9	chr7	-	3022	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	9	-3	9	3	multi-exon	FALSE	canonical	3	13	junction_1	4.32049379893857	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTTGCGTCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	7139745	7133670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
ES.29997.1	chr7	+	157	1	Intergenic	novelGene_24848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7140716	7140873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_7140700_7140900
ES.29998.1	chr7	+	3147	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	26	-448	2	448	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACATGTGTGCTCTGTC	2995	False	NA	NA	False	NA	NA	NA	7174354	7187009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
ES.29998.2	chr7	+	2680	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	36	9	12	-9	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATGTATTTTTAATCAA	3005	False	NA	NA	False	AATAAA	-20	NA	7174364	7186552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
ES.29998.3	chr7	+	3909	2	NNC	ENSMUSG00000034538.9	novel	2725	4	NA	NA	11080	3675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACATAAGTATTCCGA	NA	False	NA	NA	False	AATAAA	-6	NA	7185432	7190236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_7187066_7187960
ES.29998.4	chr7	+	3324	2	NNC	ENSMUSG00000034538.9	novel	2725	4	NA	NA	11675	3693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTTTTGGAGAATGT	363	False	NA	NA	False	AATAAA	-24	NA	7186027	7190254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_7187020_7187922
ES.29999.1	chr7	-	2771	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	9	-3	9	3	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTATTGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	7212988	7205112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ES.29999.10	chr7	-	5607	7	NNC	ENSMUSG00000098900.3	novel	633	6	NA	NA	5	4817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.11803398874989	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGCTGTTTGATATTCT	NA	False	NA	NA	False	AATAAA	-15	NA	7281204	7263679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7266258_7266524_7269105_7270217_7270305_7271038_7271163_7272293_7272333_7272408_7272499_7281095
ES.29999.2	chr7	-	4923	4	ISM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	11	-3	11	3	intron_retention	FALSE	canonical	3	42	junction_2	5.55777733351102	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTATTGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	7212986	7205112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523
ES.29999.3	chr7	-	3621	12	Fusion	ENSMUSG00000066838.8_ENSMUSG00000098900.3	novel	633	6	NA	NA	5	3	multi-exon	FALSE	canonical	0	0	junction_4	20.4155183238083	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTATTGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	7281204	7205112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7210638_7210729_7212716_7213127_7237377_7237502_7270217_7270305_7270778_7270918_7271038_7271163_7272293_7272333_7281095
ES.29999.4	chr7	-	3938	4	NNC	ENSMUSG00000066838.8	novel	2777	5	NA	NA	2222	-3	intron_retention	FALSE	canonical	0	0	junction_1	19.7989898732233	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTCATGACTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	7210775	7205118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7207359_7207602_7207683_7208511_7208599_7209244
ES.29999.5	chr7	-	1795	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	2	980	2	-980	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTGCTAATGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	7212995	7206095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ES.29999.6	chr7	-	1844	6	NNC	ENSMUSG00000066838.8	novel	2777	5	NA	NA	22	-983	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	22.8648201392445	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCGTGCTAATGGTGT	NA	False	NA	NA	False	NA	NA	NA	7212975	7206098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7210656_7210729_7212716
ES.29999.7	chr7	-	1903	7	NIC	ENSMUSG00000110105.2	novel	1524	7	NA	NA	-57	357	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.14087209644419	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAAGA	NA	False	NA	NA	False	NA	NA	NA	7281345	7215658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7216799_7237377_7237502_7270217_7270305_7270778_7270918_7271038_7271163_7272293_7272333_7281095
ES.29999.8	chr7	-	1471	7	NIC	ENSMUSG00000110105.2	novel	1524	7	NA	NA	2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.19215773966098	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGTTTAACTTCAGCT	NA	False	NA	NA	False	AATAAA	-18	NA	7281286	7216011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7216799_7237377_7237502_7270217_7270305_7270778_7270918_7271038_7271163_7272293_7272333_7281115
ES.29999.9	chr7	-	1208	10	NNC	ENSMUSG00000110105.2	novel	2450	7	NA	NA	5	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.0427529234278	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGTGAGTTTTTGCTG	NA	False	NA	NA	False	AATGAA	-11	NA	7281283	7237383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7237502_7242978_7243207_7244890_7245016_7245444_7245543_7247231_7247294_7270217_7270305_7270778_7270918_7271038_7271163_7272293_7272333_7281095
ES.3.1	chr1	+	171	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4271217	4271388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_4271200_4271400
ES.30.1	chr1	+	176	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	6156712	6156888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_6156700_6156900
ES.300.1	chr1	+	176	1	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	36937778	36937954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36937800_36938000
ES.3000.1	chr10	-	175	1	Intergenic	novelGene_2341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	67054447	67054272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67054300_67054400
ES.30000.1	chr7	-	8100	9	NNC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	11	2	intron_retention	TRUE	non_canonical	0	0	junction_2	14.3439882877811	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTGGTGTCTTTTTT	NA	False	NA	1	True	ATTAAA	-23	NA	7301786	7285305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7291428_7291637_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.11	chr7	-	4013	12	NIC	ENSMUSG00000000605.10	novel	2445	13	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	11.8732980511554	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGTCTTTGGTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	7301784	7285309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.12	chr7	-	3989	10	NIC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	8	junction_9	12.0503060767439	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATTGTCTTTGGTGTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	7301768	7285310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7301690
ES.30000.13	chr7	-	4770	11	NNC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-11	-7	intron_retention	FALSE	canonical	0	0	junction_3	13.7	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCATTGTCTTTGGT	NA	False	NA	-8	True	ATTAAA	-14	NA	7301756	7285314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292088_7292215_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.14	chr7	-	4914	10	NNC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	13.8225080356302	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCATTGTCTTTGGT	NA	False	NA	-8	True	ATTAAA	-14	NA	7301771	7285314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298178_7298962_7299069_7301690
ES.30000.16	chr7	-	2521	12	ISM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	758	1732	-4	14	3prime_fragment	FALSE	canonical	2	21	junction_11	8.98943365042381	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATTTGAATTTGAAAC	NA	False	NA	NA	False	NA	NA	NA	7301774	7287039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.17	chr7	-	2429	13	FSM	ENSMUSG00000000605.10	ENSMUST00000210061.2	2445	13	30	-14	-5	14	multi-exon	FALSE	canonical	2	9	junction_5	11.9335544672249	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATTTGAATTTGAAAC	NA	False	NA	NA	False	NA	NA	NA	7301775	7287039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.18	chr7	-	3191	10	NIC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-4	14	intron_retention	FALSE	canonical	3	23	junction_9	7.5129517797231	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATTTGAATTTGAAAC	NA	False	NA	NA	False	NA	NA	NA	7301774	7287039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.19	chr7	-	3082	12	NIC	ENSMUSG00000000605.10	novel	2445	13	NA	NA	-4	14	intron_retention	FALSE	canonical	2	9	junction_5	12.1062786797213	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTATTTGAATTTGAAAC	NA	False	NA	NA	False	NA	NA	NA	7301774	7287039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299878_7301690
ES.30000.2	chr7	-	4911	10	NIC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	7	1	intron_retention	FALSE	canonical	3	23	junction_9	7.5129517797231	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTCTTTGGTGTCTTTTT	NA	False	NA	0	True	ATTAAA	-22	NA	7301761	7285306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.20	chr7	-	2352	11	NNC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-4	10	intron_retention	FALSE	canonical	1	1	junction_4	13.4447015586066	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCTTATTTGAATTTG	NA	False	NA	NA	False	NA	NA	NA	7301774	7287043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293575_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.21	chr7	-	2261	10	NIC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-5	8	intron_retention	FALSE	canonical	3	8	junction_9	12.0503060767439	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCCTTATTTGAATT	NA	False	NA	NA	False	NA	NA	NA	7301775	7287045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7301690
ES.30000.22	chr7	-	2426	13	NNC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	0	7	intron_retention	FALSE	canonical	2	4	junction_3	12.9292949021463	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCCTTATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	7301768	7287046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292088_7292169_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.23	chr7	-	3128	10	NNC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-7	5	intron_retention	FALSE	canonical	2	2	junction_2	13.1693621244703	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGCCTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	7301777	7287048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290805_7291873_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.24	chr7	-	3085	11	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	-246	-47	25	0	intron_retention	FALSE	canonical	3	23	junction_10	8.12465383877984	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAGAAAGCCTTA	NA	False	NA	NA	False	AATGAA	-44	NA	7302507	7287053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.25	chr7	-	3270	3	NNC	ENSMUSG00000000605.10	novel	3865	9	NA	NA	5916	-16	intron_retention	FALSE	non_canonical	0	0	junction_2	20.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	5589	False	NA	NA	False	AATGAA	-21	NA	7293927	7287076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7291428_7291637
ES.30000.26	chr7	-	2501	12	NNC	ENSMUSG00000000605.10	novel	2539	12	NA	NA	-5	-17	intron_retention	FALSE	canonical	0	0	junction_1	17.3386302565558	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	AATGAA	-20	NA	7301775	7287077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7289493_7289666_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.28	chr7	-	1417	7	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	498	7210	5	3	internal_fragment	FALSE	canonical	3	23	junction_6	8.14452781524708	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACGTTAACCTTTCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	7301763	7294310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.29	chr7	-	274	2	ISM	ENSMUSG00000000605.10	ENSMUST00000210989.2	658	3	788	0	0	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACGGACCGCTGTGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	7301768	7300999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7301196_7301690
ES.30000.3	chr7	-	4161	13	FSM	ENSMUSG00000000605.10	ENSMUST00000210061.2	2445	13	31	-1747	-4	1	multi-exon	FALSE	canonical	2	9	junction_5	11.9335544672249	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTCTTTGGTGTCTTTTT	NA	False	NA	0	True	ATTAAA	-22	NA	7301774	7285306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.4	chr7	-	4375	13	NNC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_12	13.5592834127275	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7302259	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690_7301836_7302198
ES.30000.5	chr7	-	7126	8	NIC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	23	junction_7	8.4972984902646	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301771	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.6	chr7	-	5639	11	NIC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	26	0	intron_retention	FALSE	canonical	2	21	junction_10	8.5609578903298	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7302506	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299878_7301690
ES.30000.7	chr7	-	5072	11	NIC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	21	junction_10	8.36899038116307	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301768	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ES.30000.8	chr7	-	3918	11	NNC	ENSMUSG00000000605.10	novel	4607	13	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_3	14.5742924356553	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301779	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7287274_7290644_7290862_7291873_7292088_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30000.9	chr7	-	4108	11	ISM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	477	-1793	13	0	3prime_fragment	FALSE	canonical	3	23	junction_10	8.12465383877984	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7301784	7285307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690
ES.30001.1	chr7	-	2424	5	NNC	ENSMUSG00000109654.2	novel	367	2	NA	NA	33	-89	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.87082869338697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTTGGGGACCAGCT	NA	False	NA	NA	False	TATAAA	-24	NA	7377590	7369583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_7371520_7372685_7372773_7373537_7373664_7374809_7374849_7377354
ES.30002.1	chr7	-	2675	6	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	13	1372	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.1534253139133	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTCTCACTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	8096027	8087952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095258_8095396_8095759
ES.30002.2	chr7	-	2711	6	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	29	1371	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	15.2367975637927	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCACTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	8096011	8087953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095258_8095449_8095759
ES.30002.3	chr7	-	2455	6	Fusion	ENSMUSG00000092624.3_ENSMUSG00000092574.5	novel	1179	5	NA	NA	-29	1283	multi-exon	TRUE	canonical	0	0	junction_5	14.5134420452214	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCACTACTTTTGTT	NA	False	NA	NA	False	TATAAA	-13	NA	8292132	8088041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8095759_8096004_8292102
ES.30002.4	chr7	-	2532	6	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	20	1283	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	17.1067238242745	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCACTACTTTTGTT	NA	False	NA	NA	False	TATAAA	-13	NA	8096020	8088041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_8089971_8091140_8091228_8091987_8092114_8093259_8093299_8093374_8093465_8095759
ES.30002.6	chr7	-	2765	5	NNC	ENSMUSG00000092574.5	novel	1179	5	NA	NA	44	279	intron_retention	FALSE	canonical	0	0	junction_4	18.728320800328	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACCTTTTCAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	8095996	8089045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_8089971_8091140_8092114_8093259_8093299_8093374_8093465_8095258
ES.30002.7	chr7	-	4842	4	ISM	ENSMUSG00000092624.3	ENSMUST00000173038.2	909	5	-197	-1320	-27	1320	intron_retention	FALSE	canonical	1	2	junction_1	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATCTTCATGACTATT	NA	False	NA	NA	False	GATAAA	-13	NA	8292130	8283805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_8285708_8286871_8286959_8288132_8288259_8289403
ES.30003.1	chr7	-	2536	5	FSM	ENSMUSG00000092490.8	ENSMUST00000174729.2	825	5	-190	-1521	9	1091	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGTCTCACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	8865841	8857754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865573
ES.30004.1	chr7	+	179	1	Intergenic	novelGene_24849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9872458	9872637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_9872500_9872600
ES.30005.1	chr7	+	6763	2	Antisense	novelGene_ENSMUSG00000093689.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGGGAGGATTTTTGGAA	NA	False	NA	NA	False	NA	NA	NA	10205620	10410144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_10212277_10410037
ES.30006.1	chr7	-	5426	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	1	-1228	1	1228	multi-exon	FALSE	canonical	3	55	junction_1	5.43650214343336	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTCAAGTTAGACAC	NA	False	NA	NA	False	NA	NA	NA	10229320	10219927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
ES.30006.2	chr7	-	6811	1	Genic_Genomic	ENSMUSG00000030393.9	novel	NA	NA	NA	NA	2583	1228	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTCAAGTTAGACAC	NA	False	NA	NA	False	NA	NA	NA	10226738	10219927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_10219900_10226700
ES.30006.3	chr7	-	6652	3	NIC	ENSMUSG00000030393.9	novel	4199	4	NA	NA	45	1228	intron_retention	TRUE	canonical	3	66	junction_2	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCTTCAAGTTAGACAC	NA	False	NA	NA	False	NA	NA	NA	10229276	10219927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_10226333_10228416_10228456_10229068
ES.30006.4	chr7	-	4217	4	NNC	ENSMUSG00000030393.9	novel	4199	4	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.8796948747159	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTAAGACTTCATTTAT	NA	False	NA	1	True	NA	NA	NA	10229318	10221148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10224950_10226205_10226333_10228416_10228456_10229068
ES.30006.5	chr7	-	4217	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	-11	-7	-11	7	multi-exon	FALSE	canonical	3	55	junction_1	5.43650214343336	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTAAGACTTCATTTAT	NA	False	NA	1	True	NA	NA	NA	10229332	10221148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
ES.30007.1	chr7	-	2174	4	NNC	ENSMUSG00000110097.2	novel	2279	4	NA	NA	-21	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.94422221866655	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGTTTGGAGGATCCT	NA	False	NA	NA	False	NA	NA	NA	10533005	10528164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10529709_10529792_10529953_10531798_10532189_10532925
ES.30007.2	chr7	-	2229	4	NNC	ENSMUSG00000110097.2	novel	2279	4	NA	NA	-23	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.94422221866655	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATAATCAA	NA	False	NA	NA	False	NA	NA	NA	10533007	10528193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10529709_10529792_10529953_10531798_10532271_10532925
ES.30007.3	chr7	-	2240	4	NNC	ENSMUSG00000110097.2	novel	2279	4	NA	NA	-21	-29	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	5.09901951359278	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	10533005	10528197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10529709_10529792_10529953_10531798_10532271_10532908
ES.30007.4	chr7	-	1948	4	NNC	ENSMUSG00000110097.2	novel	2279	4	NA	NA	-21	-321	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	5.09901951359278	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGAGTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	10533005	10528489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10529709_10529792_10529953_10531798_10532271_10532908
ES.30007.5	chr7	-	1846	4	NNC	ENSMUSG00000110097.2	novel	2279	4	NA	NA	-21	-423	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	5.09901951359278	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	10533005	10528591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10529709_10529792_10529953_10531798_10532271_10532908
ES.30007.6	chr7	-	1876	4	FSM	ENSMUSG00000110097.2	ENSMUST00000210573.2	2279	4	-21	424	-21	-424	multi-exon	FALSE	canonical	2	8	junction_3	3.29983164553722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	10533005	10528592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_10529709_10529792_10529953_10531798_10532271_10532877
ES.30007.7	chr7	-	1378	4	FSM	ENSMUSG00000110097.2	ENSMUST00000210573.2	2279	4	-21	922	-21	-922	multi-exon	FALSE	canonical	2	8	junction_3	3.29983164553722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGATTCTGTAGAGAT	NA	False	NA	NA	False	NA	NA	NA	10533005	10529090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_10529709_10529792_10529953_10531798_10532271_10532877
ES.30008.1	chr7	+	5318	2	Intergenic	novelGene_24850	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	10559768	10755866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_10564856_10755635
ES.30008.2	chr7	+	2877	3	NIC	ENSMUSG00000054272.7	novel	2276	4	NA	NA	-23	-29	intron_retention	FALSE	canonical	3	28	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	10739648	10744445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_10740858_10742693_10742854_10742937
ES.30008.3	chr7	+	1978	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	-23	321	-23	-321	multi-exon	FALSE	canonical	3	7	junction_1	11.2644968324772	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGAGTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	10739648	10744153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
ES.30008.4	chr7	+	2268	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	-21	29	-21	-29	multi-exon	FALSE	canonical	3	7	junction_1	11.2644968324772	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	10739650	10744445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
ES.30008.5	chr7	+	6129	1	Intergenic	novelGene_24851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTATCCATAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	10755714	10761843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_10755700_10761800
ES.30009.1	chr7	-	2270	4	NNC	ENSMUSG00000095339.3	novel	1754	4	NA	NA	2	600	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	2.16024689946929	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTCAGAGCCCGACCC	NA	False	NA	NA	False	NA	NA	NA	10638975	10634066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10635707_10635790_10635951_10637767_10638158_10638895
ES.3001.1	chr10	-	2328	2	Intergenic	novelGene_2342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTAATCACCTCAGGAT	NA	False	NA	NA	False	NA	NA	NA	67073965	67067053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67069301_67073884
ES.30010.1	chr7	-	1829	4	NNC	ENSMUSG00000090714.11	novel	2272	4	NA	NA	-21	-416	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	12.4988888395018	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTTTTATTGTG	4938	False	NA	NA	False	NA	NA	NA	10900107	10895716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10896834_10896917_10897078_10898900_10899373_10900027
ES.30010.2	chr7	-	1467	4	NNC	ENSMUSG00000090714.11	novel	2272	4	NA	NA	-23	-780	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	12.4988888395018	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGTTCAAACGAGTC	4936	False	NA	NA	False	NA	NA	NA	10900109	10896080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_10896834_10896917_10897078_10898900_10899373_10900027
ES.30010.3	chr7	-	2005	1	Genic_Genomic	ENSMUSG00000090714.11	novel	NA	NA	NA	NA	-21	-2802	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTGTTTAGATTTT	4938	False	NA	NA	False	AATAAA	-17	NA	10900107	10898102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_10898100_10900100
ES.30011.1	chr7	+	4175	1	Intergenic	novelGene_24852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATTCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	10906090	10910265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_10906100_10910300
ES.30012.1	chr7	+	1003	6	NNC	ENSMUSG00000110379.2	novel	989	6	NA	NA	-539	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.35646599662505	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTCTTGCTTGAGTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	10915787	10922727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_10915896_10916326_10916361_10916575_10916768_10919505_10919704_10922042_10922218_10922431
ES.30013.1	chr7	-	3044	1	Intergenic	novelGene_24853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	10939342	10936298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_10936300_10939300
ES.30014.1	chr7	-	4045	3	NNC	ENSMUSG00000095936.4	novel	1745	4	NA	NA	2	1057	intron_retention	FALSE	non_canonical	0	0	junction_2	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGGTCTCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	11044607	11039247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_11041336_11041419_11041704_11042934
ES.30014.2	chr7	-	2712	4	NNC	ENSMUSG00000095936.4	novel	1745	4	NA	NA	2	1051	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.6562449087639	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGAGTTCGGTCTCA	NA	False	NA	NA	False	NA	NA	NA	11044607	11039253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_11041336_11041419_11041580_11043399_11043790_11044527
ES.30014.3	chr7	-	2795	4	FSM	ENSMUSG00000095936.4	ENSMUST00000210521.2	1745	4	0	-1050	0	1050	multi-exon	FALSE	canonical	1	3	junction_3	9.89949493661167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGAGTTCGGTCTC	NA	False	NA	NA	False	NA	NA	NA	11044609	11039254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_11041336_11041419_11041580_11043399_11043872_11044527
ES.30015.1	chr7	-	206	1	Intergenic	novelGene_24854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAGTTGTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	11109196	11108990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_11109000_11109200
ES.30016.1	chr7	+	2060	5	NIC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	0	101	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	11.27774356864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGAGTTGCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	11131841	11136346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_11131924_11132016_11132147_11132578_11133051_11134886_11135047_11135130
ES.30016.2	chr7	+	1958	5	NIC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	11.27774356864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	11131841	11136244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_11131924_11132016_11132147_11132578_11133051_11134886_11135047_11135130
ES.30016.3	chr7	+	2001	4	FSM	ENSMUSG00000070828.11	ENSMUST00000145237.8	1829	4	1	-173	1	173	multi-exon	FALSE	canonical	3	19	junction_1	4.49691252107735	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAGTTTCCAAACATTT	NA	False	NA	NA	False	TATAAA	-15	NA	11131842	11136418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_11131924_11132578_11133051_11134886_11135047_11135130
ES.30016.4	chr7	+	2048	4	NNC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	2	173	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.4988888395018	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAGTTTCCAAACATTT	NA	False	NA	NA	False	TATAAA	-15	NA	11131843	11136418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11131972_11132578_11133051_11134886_11135047_11135130
ES.30016.5	chr7	+	1722	4	NNC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.6714276000077	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	11131843	11136247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11131924_11132578_11133051_11134886_11135047_11135237
ES.30016.6	chr7	+	2051	4	NIC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	2	1	intron_retention	FALSE	canonical	3	7	junction_1	10.1434160364686	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	11131843	11136246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_11132147_11132578_11133051_11134886_11135047_11135130
ES.30016.7	chr7	+	2255	4	NNC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	4	417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.4412301024373	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGCTCAGAGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	11131845	11136662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11131937_11132578_11133051_11134886_11135047_11135130
ES.30017.1	chr7	+	1890	5	Fusion	ENSMUSG00000110190.2_ENSMUSG00000109916.2	novel	2277	4	NA	NA	-271	-476	multi-exon	TRUE	non_canonical	0	0	junction_1	10.5	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAATTGTACTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	11211863	11252562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_11212060_11212699_11212809_11249057_11249421_11251256_11251417_11251500
ES.30017.2	chr7	+	2018	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-36275	-250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.89949493661167	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAGTTTCCAAACATTT	NA	False	NA	NA	False	TATAAA	-15	NA	11211961	11252788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11212060_11248948_11249421_11251256_11251417_11251500
ES.30017.3	chr7	+	2257	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-36274	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.89949493661167	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGCTCAGAGTAGTTT	NA	False	NA	NA	False	NA	NA	NA	11211962	11253032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11212056_11248948_11249421_11251256_11251417_11251500
ES.30017.4	chr7	+	1825	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-23	-427	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	3.29983164553722	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTATGTTTTGTTTTGT	NA	False	NA	NA	False	AGTAAA	-43	NA	11248213	11252611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11248296_11248948_11249421_11251256_11251417_11251500
ES.30017.5	chr7	+	2222	4	NNC	ENSMUSG00000110190.2	novel	2277	4	NA	NA	-21	-28	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	3.29983164553722	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	11248215	11253010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11248296_11248948_11249421_11251256_11251417_11251500
ES.30018.1	chr7	+	1360	3	NNC	ENSMUSG00000109969.2	novel	2277	4	NA	NA	-25	-423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	11343209	11347616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11343294_11346256_11346417_11346500
ES.30018.2	chr7	+	1220	4	NNC	ENSMUSG00000109969.2	novel	2277	4	NA	NA	-23	-1032	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.12825877028341	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACCCTAGGGAGGTA	NA	False	NA	NA	False	NA	NA	NA	11343211	11347007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11343294_11343947_11344419_11346256_11346417_11346500
ES.30018.3	chr7	+	2223	4	NNC	ENSMUSG00000109969.2	novel	2277	4	NA	NA	-23	-29	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.12825877028341	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	11343211	11348010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_11343294_11343947_11344419_11346256_11346417_11346500
ES.30019.1	chr7	-	2037	4	NNC	ENSMUSG00000109860.2	novel	1147	3	NA	NA	-4638	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTTATGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	11722477	11713319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_11714562_11714644_11714805_11717443_11717934_11722332
ES.3002.1	chr10	-	1714	1	Antisense	novelGene_ENSMUSG00000037876.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAAAACAACCTTAGATC	4830	False	NA	NA	False	NA	NA	NA	67092115	67090401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_67090400_67092100
ES.30020.1	chr7	+	189	1	Intergenic	novelGene_24855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	11859963	11860152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_11860000_11860200
ES.30021.1	chr7	-	5246	4	FSM	ENSMUSG00000034071.16	ENSMUST00000080348.12	2591	4	-6	-2649	-6	2649	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTATTTTCCTTCAG	NA	False	NA	31	True	NA	NA	NA	12156684	12146430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12151146_12152469_12152594_12155734_12155774_12156316
ES.30021.2	chr7	-	4765	3	FSM	ENSMUSG00000034071.16	ENSMUST00000120220.3	2195	3	149	-2719	-1	2609	multi-exon	FALSE	canonical	1	1	junction_1	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCACTTATACATCTGTA	NA	False	NA	-9	True	NA	NA	NA	12156367	12146470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12151146_12155734_12155774_12156316
ES.30021.3	chr7	-	2193	3	FSM	ENSMUSG00000034071.16	ENSMUST00000120220.3	2195	3	112	-110	-38	0	multi-exon	FALSE	canonical	1	1	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAAAGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	12156404	12149079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12151146_12155734_12155774_12156316
ES.30022.1	chr7	-	246	1	Intergenic	novelGene_24856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTCTATAATGTATAC	NA	False	NA	NA	False	AATGAA	-20	NA	12177325	12177079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12177100_12177300
ES.30023.1	chr7	+	4793	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	-43	-2	-43	2	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGACCTTTTTATTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	12212176	12230164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.10	chr7	+	4019	7	NNC	ENSMUSG00000030386.20	novel	4748	7	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.0740088679724	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAACTAATGGAAACCTG	NA	False	NA	8	True	AATAAA	-12	NA	12212254	12229476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223883_12223972_12226283
ES.30023.11	chr7	+	3475	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	34	0	-24	0	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTGTAATGTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	12212265	12217828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
ES.30023.13	chr7	+	4602	6	NIC	ENSMUSG00000030386.20	novel	4748	7	NA	NA	-14	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.9653512129458	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAATTGATGACCTT	NA	False	NA	NA	False	AATAAA	-10	NA	12212275	12230155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12212634_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.14	chr7	+	2182	5	ISM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	-13	12852	-13	-1191	5prime_fragment	FALSE	canonical	2	4	junction_4	49.6959505392542	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-16	NA	12212276	12216637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044
ES.30023.15	chr7	+	3989	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	77	682	7	0	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATGGAAACCTGGTTA	NA	False	NA	12	True	AATAAA	-16	NA	12212296	12229480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.16	chr7	+	4145	4	NNC	ENSMUSG00000030386.20	novel	3477	3	NA	NA	-5382	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5212018570267	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAATTGATGACCTT	NA	False	NA	NA	False	AATAAA	-10	NA	12218057	12230155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12218108_12223496_12223624_12223875_12223972_12226283
ES.30023.17	chr7	+	4123	3	FSM	ENSMUSG00000030386.20	ENSMUST00000133515.2	3477	3	-1560	914	-1560	-914	multi-exon	FALSE	canonical	3	95	junction_2	3.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTTGTGCATTATTAA	NA	False	NA	NA	False	AATAAA	-39	NA	12221879	12228566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12223624_12223875_12223972_12226283
ES.30023.18	chr7	+	4750	2	NNC	ENSMUSG00000030386.20	novel	3477	3	NA	NA	5891	15834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAACAACAATTGATCC	NA	False	NA	NA	False	AATAAA	-21	NA	12229330	12245996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12233897_12245812
ES.30023.2	chr7	+	3132	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	7	1609	-5	-927	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATCAAAATGTAGAAGTT	NA	False	NA	NA	False	AATAAA	-26	NA	12212226	12228553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.3	chr7	+	3347	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	11	1390	-1	-708	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTAGTACTGAGTGGG	NA	False	NA	NA	False	AATGAA	-9	NA	12212230	12228772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.4	chr7	+	4156	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	14	578	2	95	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGTTTTATGGGTCC	NA	False	NA	116	True	NA	NA	NA	12212233	12229584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.5	chr7	+	4106	8	FSM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	-44	7	14	2	multi-exon	FALSE	canonical	2	2	junction_5	49.3550237295753	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGGAAACCTGGTTACC	NA	False	NA	14	True	AATAAA	-18	NA	12212245	12229482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044_12215109_12223496_12223624_12223875_12223972_12226283
ES.30023.6	chr7	+	3935	3	ISM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	15	2	15	-2	intron_retention	FALSE	canonical	3	117	junction_2	4	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTTGTAATGTCTGA	NA	False	NA	NA	False	NA	NA	NA	12212246	12217826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12212634_12213590_12213674_12214361
ES.30023.7	chr7	+	1257	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	33	3458	21	-2776	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCCTGTATACCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	12212252	12226704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.8	chr7	+	3938	6	NNC	ENSMUSG00000030386.20	novel	4748	7	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.0785329369513	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACCTGGTTACCTAATT	NA	False	NA	19	True	AATAAA	-23	NA	12212252	12229487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12212634_12213590_12213629_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30023.9	chr7	+	4028	7	NNC	ENSMUSG00000030386.20	novel	4748	7	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.7551534045867	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGGAAACCTGGTTACC	NA	False	NA	14	True	AATAAA	-18	NA	12212253	12229482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12212634_12213596_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ES.30024.1	chr7	-	6483	1	Antisense	novelGene_ENSMUSG00000030386.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAATTGGTCCAGTCTC	NA	False	NA	NA	False	NA	NA	NA	12220035	12213552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_12213600_12220000
ES.30024.2	chr7	-	5251	2	Antisense	novelGene_ENSMUSG00000030386.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12219271	12213577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_12214417_12214859
ES.30025.1	chr7	+	178	1	Intergenic	novelGene_24857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTCCC	NA	False	NA	NA	False	NA	NA	NA	12456039	12456217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12456000_12456200
ES.30026.1	chr7	-	5188	6	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	10	junction_4	13.8130373198656	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTCATTGTTTTGTG	NA	False	NA	1	True	AATAAA	-22	NA	12514570	12502016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12507518_12507876_12509586_12514498
ES.30026.10	chr7	-	6293	4	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	32	-1	intron_retention	FALSE	canonical	3	26	junction_2	10.6562449087639	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514549	12502019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12505670_12505935_12509586_12514498
ES.30026.11	chr7	-	5539	5	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	16	-1	intron_retention	FALSE	canonical	3	26	junction_3	9.3407708461347	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514565	12502019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12509586_12514498
ES.30026.12	chr7	-	3647	7	NNC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	94	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.9521854998687	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514487	12502019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039_12509582_12514461
ES.30026.13	chr7	-	5451	1	NIC	ENSMUSG00000070822.6	novel	3626	6	NA	NA	795	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGCCTCATTGTTT	NA	False	NA	-3	True	AATAAA	-18	NA	12507471	12502020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12502000_12507500
ES.30026.15	chr7	-	3815	6	NNC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.1732496142788	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGCCTCATTGTT	NA	False	NA	-4	True	AATAAA	-17	NA	12514560	12502021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12503673_12504730_12504821_12505935_12506043_12507321_12507518_12507876_12509586_12514498
ES.30026.16	chr7	-	5076	5	NNC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_3	19.4807597387782	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGCCTCATTGTT	NA	False	NA	-4	True	AATAAA	-17	NA	12514576	12502021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12503673_12504730_12506043_12507367_12507518_12507700_12509586_12514498
ES.30026.17	chr7	-	3595	6	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	32	-3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	16.3413585726524	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGCCTCATTGTT	NA	False	NA	-4	True	AATAAA	-17	NA	12514549	12502021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12504821_12505935_12506043_12507367_12507518_12508039_12509586_12514498
ES.30026.2	chr7	-	4652	6	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	10	junction_4	14.5794375748861	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTCATTGTTTTGTG	NA	False	NA	1	True	AATAAA	-22	NA	12514589	12502016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12505670_12505935_12506043_12507367_12507518_12507876_12509586_12514498
ES.30026.3	chr7	-	3736	7	FSM	ENSMUSG00000070822.6	ENSMUST00000211392.2	3709	7	-26	-1	-26	-1	multi-exon	FALSE	canonical	3	19	junction_4	11.5854314646552	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCCTCATTGTTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	12514607	12502017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039_12509586_12514498
ES.30026.5	chr7	-	3335	4	NNC	ENSMUSG00000070822.6	novel	3626	6	NA	NA	927	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.2289111041209	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12507339	12502018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12503673_12504730_12504821_12505482_12505670_12505935
ES.30026.7	chr7	-	3844	7	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	13.5082279453014	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12514553	12502018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12507876_12509586_12514498
ES.30026.8	chr7	-	6221	4	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	10	junction_2	17.3781471969828	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12514569	12502018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12507518_12507876_12509586_12514498
ES.30026.9	chr7	-	4902	5	NIC	ENSMUSG00000070822.6	novel	3709	7	NA	NA	5	-1	intron_retention	FALSE	canonical	3	10	junction_3	16.224980739588	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGCCTCATTGTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	12514576	12502019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12503673_12504730_12506043_12507367_12507518_12507876_12509586_12514498
ES.30027.1	chr7	+	379	1	Intergenic	novelGene_24858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTATATCCCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	12549586	12549965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12549600_12550000
ES.30028.1	chr7	-	6519	1	FSM	ENSMUSG00000109724.2	ENSMUST00000210952.2	3442	1	-6426	3349	-6426	-2244	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCATTCAGAATGTCAACA	NA	False	NA	NA	False	AATAAA	-20	NA	12539517	12532998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12533000_12539500
ES.30028.10	chr7	-	5650	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	-9	1086	-9	5	multi-exon	FALSE	canonical	3	14	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTAAATAAGTTTATAC	NA	False	NA	NA	False	AATGAA	-39	NA	12552794	12539994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12545594_12552743
ES.30028.11	chr7	-	2594	4	FSM	ENSMUSG00000057894.11	ENSMUST00000121215.2	2564	4	-1	-29	-1	5	multi-exon	FALSE	canonical	0	0	junction_2	5.8878405775519	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTAAATAAGTTTATAC	NA	False	NA	NA	False	AATGAA	-39	NA	12552780	12539994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12540520_12541838_12541901_12543623_12545594_12552743
ES.30028.12	chr7	-	5628	2	NNC	ENSMUSG00000057894.11	novel	2564	4	NA	NA	223	0	intron_retention	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-10	NA	12552556	12540023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12545594_12552498
ES.30028.13	chr7	-	3979	3	NIC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	0	-310	intron_retention	FALSE	canonical	3	4	junction_1	5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTTGATCATTCATT	NA	False	NA	NA	False	GATAAA	-16	NA	12552781	12540333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12540520_12541838_12545594_12552743
ES.30028.14	chr7	-	4445	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	-1	2283	-1	-1168	multi-exon	FALSE	canonical	3	14	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAGACTCCTGACAGA	NA	False	NA	NA	False	GATAAA	-16	NA	12552786	12541191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12545594_12552743
ES.30028.15	chr7	-	3704	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	-8	3031	-8	-1916	multi-exon	FALSE	canonical	3	14	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGTAGTGTCCCTGCT	NA	False	NA	NA	False	AGTAAA	-18	NA	12552793	12541939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12545594_12552743
ES.30028.16	chr7	-	3808	3	NNC	ENSMUSG00000057894.11	novel	6727	2	NA	NA	-1	-1919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTAGTAGTGTCCCT	NA	False	NA	NA	False	AGTAAA	-15	NA	12552780	12541942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12545594_12550076_12550197_12552743
ES.30028.17	chr7	-	2714	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	5	4008	-1	-2893	multi-exon	FALSE	canonical	3	14	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTCTCTTAGATCTT	NA	False	NA	NA	False	TATAAA	-23	NA	12552780	12542916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12545594_12552743
ES.30028.2	chr7	-	6727	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	5	-5	-1	0	multi-exon	FALSE	canonical	3	14	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAATTGTATTT	NA	False	NA	-7	True	NA	NA	NA	12552780	12538903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12545594_12552743
ES.30028.3	chr7	-	1487	2	NNC	ENSMUSG00000057894.11	novel	6727	2	NA	NA	1539	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGATTTTTTAAAAATT	NA	False	NA	-13	True	NA	NA	NA	12540463	12538909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12539364_12539430
ES.30028.4	chr7	-	3449	4	NNC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.8878405775519	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCTGATTTTTTAAAAA	NA	False	NA	-15	True	NA	NA	NA	12552780	12538911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12540520_12541838_12541901_12543851_12545594_12552743
ES.30028.5	chr7	-	3674	4	NNC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.55777733351102	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTCTGATTTTTTAAAA	NA	False	NA	-16	True	NA	NA	NA	12552774	12538912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12540520_12541838_12541901_12543619_12545594_12552743
ES.30028.6	chr7	-	4946	3	NIC	ENSMUSG00000057894.11	novel	2564	4	NA	NA	-2	-464	intron_retention	FALSE	canonical	3	4	junction_1	5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCAGCTTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	12552787	12539372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12540520_12541838_12545594_12552743
ES.30028.7	chr7	-	4958	3	NNC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	0	-466	intron_retention	FALSE	canonical	0	0	junction_2	2	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATTTCAGCTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	12552781	12539374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12540520_12541838_12545594_12552723
ES.30028.8	chr7	-	3953	4	NNC	ENSMUSG00000057894.11	novel	2564	4	NA	NA	-1	-468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.8878405775519	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACATTTCAGCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	12552780	12539376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12540520_12541838_12542638_12543619_12545594_12552743
ES.30028.9	chr7	-	4317	3	NIC	ENSMUSG00000057894.11	novel	2564	4	NA	NA	-1	5	intron_retention	FALSE	canonical	3	4	junction_1	5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTAAATAAGTTTATAC	NA	False	NA	NA	False	AATGAA	-39	NA	12552780	12539994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12540520_12541838_12545594_12552743
ES.30029.1	chr7	+	3359	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-43	-173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.944396193349	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCCTCTTTGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	12568644	12584331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12568748_12568849_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.10	chr7	+	3483	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-54	8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	121.410203442709	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCGTGTAAGTCATT	NA	False	NA	35	True	NA	NA	NA	12568909	12584512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12569881_12569988_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.12	chr7	+	1446	7	ISM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	232	2211	-44	1558	5prime_fragment	FALSE	canonical	3	285	junction_1	18.1995115929583	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATGTATATCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	12568919	12582293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898
ES.30029.13	chr7	+	3390	7	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-38	-258	intron_retention	FALSE	canonical	0	0	junction_6	118.606726434699	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAATATACCTTTGAGGA	NA	False	NA	NA	False	NA	NA	NA	12568925	12584246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581901
ES.30029.14	chr7	+	4476	7	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-37	1	intron_retention	FALSE	canonical	3	13	junction_1	137.611469967684	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568926	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569208_12569373_12569455_12569881_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.17	chr7	+	5242	7	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-36	1	intron_retention	FALSE	canonical	3	285	junction_1	16.9451730262305	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568927	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12580824_12581898_12582026_12582323
ES.30029.18	chr7	+	2436	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	103.944396193349	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568930	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323_12583379_12584291
ES.30029.19	chr7	+	3334	8	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-33	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	108.915245086466	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATAGCGTGTAAGTCAT	NA	False	NA	34	True	NA	NA	NA	12568930	12584511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578379_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.2	chr7	+	3638	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	-39	-8	-39	8	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCGTGTAAGTCATT	NA	False	NA	35	True	NA	NA	NA	12568648	12584512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.21	chr7	+	1268	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	246	2077	-30	-1425	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTACTGTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	12568933	12582427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.23	chr7	+	3251	7	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-29	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	116.440852892025	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12568934	12584507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12570347_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.24	chr7	+	4010	7	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-25	1	intron_retention	FALSE	canonical	3	285	junction_1	18.4157239577729	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568938	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.25	chr7	+	2887	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	261	443	-15	209	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTTAAGAAGTCAAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	12568948	12584061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.26	chr7	+	3632	7	ISM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	262	-5	-14	5	intron_retention	FALSE	canonical	3	285	junction_1	18.1995115929583	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTATAGCGTGTAAGTC	NA	False	NA	32	True	NA	NA	NA	12568949	12584509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898
ES.30029.28	chr7	+	4302	6	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-12	8	intron_retention	FALSE	canonical	3	285	junction_1	19.8937176012931	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCGTGTAAGTCATT	NA	False	NA	35	True	NA	NA	NA	12568951	12584512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12571112_12578358_12578833_12580722_12580824_12581898
ES.30029.29	chr7	+	3182	8	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-5	-254	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.478320108186	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACCTTTGAGGAATTT	NA	False	NA	NA	False	NA	NA	NA	12568958	12584250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569208_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.3	chr7	+	3971	8	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-34	8	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	98.8216286331807	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCGTGTAAGTCATT	NA	False	NA	35	True	NA	NA	NA	12568653	12584512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12569881_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.31	chr7	+	10566	7	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-1	3	intron_retention	FALSE	canonical	3	285	junction_1	18.2094297915485	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12568962	12584507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.33	chr7	+	3193	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	103.944396193349	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12568966	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323_12583667_12583786
ES.30029.34	chr7	+	3378	8	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	19	-256	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	98.8216286331807	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATACCTTTGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	12568982	12584248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12569881_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.35	chr7	+	3689	7	NIC	ENSMUSG00000058638.15	novel	2499	7	NA	NA	-197	3	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	106.410238646894	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12569212	12584507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569455_12569881_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.36	chr7	+	2859	7	FSM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	-37	-323	-37	323	multi-exon	FALSE	canonical	3	294	junction_5	14.5764269360575	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTTCTGCTGTGA	NA	False	NA	NA	False	ACTAAA	-36	NA	12569372	12584175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.37	chr7	+	3002	6	NNC	ENSMUSG00000058638.15	novel	2499	7	NA	NA	98	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.166449178684	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGACTATAGCGTGTA	NA	False	NA	28	True	NA	NA	NA	12570315	12584505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582017_12582323
ES.30029.38	chr7	+	4561	1	Intergenic	novelGene_24859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTCTATAAATTCCAAC	NA	False	NA	NA	False	AAAAAG	-38	NA	12572091	12576652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12572100_12576700
ES.30029.39	chr7	+	988	3	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	9064	1426	8256	-1426	intron_retention	FALSE	canonical	3	294	junction_2	16.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTCTACTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	12578473	12582426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12578833_12580722_12580824_12581898
ES.30029.4	chr7	+	3642	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.147074138797	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12568653	12584507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12568748_12568849_12569208_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.5	chr7	+	2641	2	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	-732	11769	-10	1470	intron_retention	FALSE	canonical	3	338	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12568677	12572083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12569455_12570219
ES.30029.6	chr7	+	4671	7	NIC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-2	3	intron_retention	FALSE	canonical	3	285	junction_1	16.918103387266	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACTATAGCGTGTAAG	NA	False	NA	30	True	NA	NA	NA	12568685	12584507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12582026_12582323
ES.30029.7	chr7	+	3341	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	-2	252	-2	-252	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTTTGAGGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	12568685	12584252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.30029.9	chr7	+	3618	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	-63	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	127.608532238248	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGACTATAGCGTGTAA	NA	False	NA	29	True	NA	NA	NA	12568900	12584506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12569092_12569373_12569455_12569881_12570120_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ES.3003.1	chr10	-	3105	4	NIC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	8	0	intron_retention	FALSE	canonical	2	11	junction_2	60.0351748745868	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121076	67102467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67103946_67105884_67107226_67111348_67111434_67120875
ES.3003.10	chr10	-	1939	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	67121133	67102470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
ES.3003.11	chr10	-	2020	5	NNC	ENSMUSG00000075000.12	novel	583	5	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	63.5349313370212	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	67121069	67102470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67107000_67107226_67111348_67111434_67120875
ES.3003.12	chr10	-	1725	3	NIC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	44	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	63.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	67121040	67102470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67103946_67111348_67111434_67120875
ES.3003.13	chr10	-	3134	5	NNC	ENSMUSG00000075000.12	novel	583	5	NA	NA	61	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	59.70081657733	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACCTTTGTTGAGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	67121023	67102472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67107000_67107226_67111348_67111434_67119713
ES.3003.14	chr10	-	1779	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.4801094275386	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACCTTTGTTGAGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	67121060	67102472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67111348_67111425_67120871
ES.3003.15	chr10	-	3716	3	NIC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	31	-5	intron_retention	FALSE	canonical	3	129	junction_2	35.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACCTTTGTTGAGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	67121053	67102472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67105926_67111348_67111434_67120875
ES.3003.16	chr10	-	1390	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-1	424	-1	-424	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGTGGCCTGAGAGG	NA	False	NA	NA	False	CATAAA	-17	NA	67121085	67102891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ES.3003.2	chr10	-	1814	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	-2	1	-2	-1	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	False	NA	NA	False	AATAAA	-20	NA	67121086	67102468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ES.3003.3	chr10	-	1874	5	NNC	ENSMUSG00000075000.12	novel	583	5	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.8560612593121	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	False	NA	NA	False	AATAAA	-20	NA	67121051	67102468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67111348_67111434_67119713_67119809_67120875
ES.3003.5	chr10	-	7226	3	NIC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	9	-1	intron_retention	FALSE	canonical	3	129	junction_2	8.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	False	NA	NA	False	AATAAA	-20	NA	67121075	67102468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67103946_67105884_67111434_67120875
ES.3003.6	chr10	-	1887	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	81.2991731541936	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121130	67102469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67111348_67111434_67120845
ES.3003.7	chr10	-	3060	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	88.7280489285472	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTTGAGTATGACT	NA	False	NA	NA	False	AATAAA	-19	NA	67121091	67102469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67119713
ES.3003.8	chr10	-	2960	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	83.1157158558008	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	67121072	67102470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67111348_67111434_67119713
ES.3003.9	chr10	-	1856	5	NNC	ENSMUSG00000075000.12	novel	583	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	63.5349313370212	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	False	NA	NA	False	AATAAA	-18	NA	67121088	67102470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67103946_67105884_67105926_67107183_67107226_67111348_67111434_67120875
ES.30030.1	chr7	-	8090	1	Antisense	novelGene_ENSMUSG00000058638.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAATAAAGGTTGAA	NA	False	NA	NA	False	NA	NA	NA	12577938	12569848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_12569800_12577900
ES.30031.1	chr7	+	199	1	Intergenic	novelGene_24860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGCCCAAAGCTCTTT	6419	False	NA	NA	False	NA	NA	NA	12610146	12610345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12610100_12610300
ES.30032.1	chr7	+	4706	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	-8	-864	-8	864	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATACTTTTTTTTAATT	NA	False	NA	NA	False	AATAAA	-30	NA	12615095	12628213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
ES.30032.2	chr7	+	2313	5	NNC	ENSMUSG00000060397.7	novel	3834	4	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.08503365959205	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACATATGACCCTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	12615105	12625756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12615288_12615871_12615946_12618569_12618697_12618949_12619046_12623922
ES.30032.3	chr7	+	2236	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	12	1586	12	-5	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGACCCTTGTTGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	12615115	12625763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
ES.30032.4	chr7	+	2604	5	NNC	ENSMUSG00000060397.7	novel	3834	4	NA	NA	19	-601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.63680924774785	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTTCTTAACAAATAGA	NA	False	NA	NA	False	ATTAAA	-15	NA	12615122	12626748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922_12625714_12626323
ES.30032.5	chr7	+	124	1	ISM	ENSMUSG00000060397.7	ENSMUST00000081891.7	2506	3	9733	808	9733	-808	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTCGGCTGTGACTCA	NA	False	NA	NA	False	AATAAA	-15	NA	12624836	12624960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12624800_12625000
ES.30033.1	chr7	+	3301	3	FSM	ENSMUSG00000054715.12	ENSMUST00000120809.2	1826	3	-68	-1407	-42	-139	multi-exon	FALSE	canonical	1	1	junction_1	10	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTCCATGTCTCCTCTT	NA	False	NA	10	True	AATACA	-14	NA	12631699	12642871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631805_12637527_12638013_12640160
ES.30033.10	chr7	+	2943	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	6	46	1	-46	multi-exon	FALSE	canonical	3	21	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGTAATAAAATCC	NA	False	NA	-16	True	NA	NA	NA	12631768	12642964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631908_12640160
ES.30033.11	chr7	+	1825	3	FSM	ENSMUSG00000054715.12	ENSMUST00000120809.2	1826	3	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_1	10	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCTGCATTATTTCT	NA	False	NA	NA	False	ACTAAA	-2	NA	12631768	12641464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631805_12637527_12638013_12640160
ES.30033.12	chr7	+	6799	5	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.09326673973661	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTCTGTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	12631768	12642168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631871_12631962_12635982_12637204_12637390_12637527_12638013_12640160
ES.30033.13	chr7	+	3299	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	27	-706	1	-138	multi-exon	FALSE	canonical	2	3	junction_1	9	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATGTCTCCTCTTG	NA	False	NA	11	True	AATACA	-15	NA	12631768	12642872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631871_12637527_12638013_12640160
ES.30033.14	chr7	+	3603	4	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.89949493661167	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACATGGGCAGGGACTG	NA	False	NA	4	True	AATAAA	-15	NA	12631768	12642984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631871_12631962_12632155_12637527_12638013_12640160
ES.30033.15	chr7	+	3468	3	NIC	ENSMUSG00000054715.12	novel	1826	3	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	7.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631774	12643010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12631908_12637527_12638013_12640160
ES.30033.16	chr7	+	2611	3	NIC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	7.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTCTGTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	12631789	12642168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12631908_12637527_12638013_12640160
ES.30033.17	chr7	+	3306	3	NIC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	11	-132	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	7.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCTCCTCTTGTGGCTT	NA	False	NA	17	True	AATACA	-21	NA	12631804	12642878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12631908_12637527_12638013_12640160
ES.30033.18	chr7	+	3294	4	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	11	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.69967317119759	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTCTGTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	12631804	12642169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631871_12631962_12632059_12637527_12638013_12639522
ES.30033.19	chr7	+	3451	2	NNC	ENSMUSG00000054715.12	novel	2995	2	NA	NA	11	-140	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCCATGTCTCCTCT	NA	False	NA	9	True	AATACA	-13	NA	12631804	12642870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631908_12639522
ES.30033.2	chr7	+	2810	2	NIC	ENSMUSG00000054715.12	novel	1826	3	NA	NA	-30	-133	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTCCTCTTGTGGCT	NA	False	NA	16	True	AATACA	-20	NA	12631711	12642877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12631805_12640160
ES.30033.20	chr7	+	3228	3	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTCTGTTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	12631810	12642168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631908_12637527_12638013_12639522
ES.30033.21	chr7	+	4287	2	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	5804	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTCCATGTCTCCTC	NA	False	NA	8	True	AATACA	-12	NA	12637597	12642869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12638538_12639522
ES.30033.22	chr7	+	3222	3	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	5988	-138	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	0.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCATGTCTCCTCTTG	NA	False	NA	11	True	AATACA	-15	NA	12637781	12642872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12638013_12639522_12639802_12640160
ES.30033.23	chr7	+	1199	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	-436	-2	-436	2	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCTTGTCTAAT	NA	False	NA	40	True	AATAAA	-26	NA	12655780	12660615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.24	chr7	+	765	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6837.18021994448	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656244	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656316_12656864_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.25	chr7	+	723	6	NNC	ENSMUSG00000012848.16	novel	794	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6837.18021994448	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656244	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656309_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.26	chr7	+	866	6	FSM	ENSMUSG00000012848.16	ENSMUST00000137329.4	652	6	-119	-95	0	1	multi-exon	FALSE	canonical	3	632	junction_1	6589.62965271949	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGCTTGTCTAA	NA	False	NA	39	True	AATAAA	-25	NA	12656244	12660614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12656448_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.27	chr7	+	695	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	6942.55032678914	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656244	12660613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659701_12659793_12660322_12660422_12660498
ES.30033.3	chr7	+	2090	2	NIC	ENSMUSG00000054715.12	novel	2087	2	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCTGTTGTCTTATG	NA	False	NA	NA	False	NA	NA	NA	12631724	12642170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12631805_12640160
ES.30033.30	chr7	+	1260	5	FSM	ENSMUSG00000012848.16	ENSMUST00000139349.3	1248	5	-13	1	0	-1	multi-exon	FALSE	canonical	3	14799	junction_4	1606.02496478106	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656244	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12660422_12660498
ES.30033.31	chr7	+	1397	4	NIC	ENSMUSG00000012848.16	novel	1248	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14799	junction_3	1830.45950515164	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12656244	12660612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12656316_12656899_12657009_12659318_12660422_12660498
ES.30033.32	chr7	+	766	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	28	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12656244	12660612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.33	chr7	+	3781	2	FSM	ENSMUSG00000012848.16	ENSMUST00000131795.2	445	2	-18	-3318	0	-2	multi-exon	FALSE	canonical	3	18861	junction_1	0	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCTTCCTGTGTGCTTG	NA	False	NA	34	True	AATAAA	-20	NA	12656244	12660609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12656316_12656899
ES.30033.34	chr7	+	677	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6963.99639862055	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCTTCCTGTGTGCTTG	NA	False	NA	34	True	AATAAA	-20	NA	12656245	12660609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656316_12656899_12657009_12659318_12659478_12659663_12659793_12660322_12660422_12660498
ES.30033.35	chr7	+	701	6	NNC	ENSMUSG00000012848.16	novel	794	6	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6837.18021994448	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656246	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656289_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.38	chr7	+	3610	4	NIC	ENSMUSG00000012848.16	novel	794	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	14799	junction_3	1329.16774294627	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCTTCCTGTGTGCTTG	NA	False	NA	34	True	AATAAA	-20	NA	12656257	12660609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.39	chr7	+	2606	6	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6896.10961049779	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656275	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12656316_12656899_12658478_12658880_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.4	chr7	+	4047	3	NNC	ENSMUSG00000054715.12	novel	1826	3	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTCCAACATCTG	NA	False	NA	32	True	AATAAA	-43	NA	12631732	12643012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631805_12637527_12638013_12639522
ES.30033.40	chr7	+	198	3	NNC	ENSMUSG00000012848.16	novel	1248	5	NA	NA	598	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7399.5	1203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTCCTGTGTGCTTGT	NA	False	NA	35	True	AATAAA	-21	NA	12656961	12660610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12657009_12660382_12660422_12660498
ES.30033.41	chr7	+	4501	1	FSM	ENSMUSG00000065006.3	ENSMUST00000083072.3	107	1	-4202	-192	-4202	192	mono-exon	FALSE	NA	NA	NA	NA	NA	1212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTATGTATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	12660498	12664999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12660500_12665000
ES.30033.42	chr7	+	3308	2	FSM	ENSMUSG00000033967.5	ENSMUST00000045870.5	3239	2	-71	2	-71	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATGTGTATGTATA	NA	False	NA	NA	False	ATTAAA	-12	NA	12661271	12664997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12661394_12661811
ES.30033.43	chr7	+	2366	3	NNC	ENSMUSG00000033967.5	novel	3239	2	NA	NA	-70	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTGTATGTATATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	12661272	12665000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12661394_12661811_12663011_12663954
ES.30033.5	chr7	+	3472	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	-8	-844	-8	0	multi-exon	FALSE	canonical	2	3	junction_1	9	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631733	12643010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631871_12637527_12638013_12640160
ES.30033.6	chr7	+	2969	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-44	-838	8	-2	multi-exon	FALSE	canonical	3	22	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGGCTTCTCCAACA	NA	False	NA	28	True	AATAAA	-39	NA	12631749	12643008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631871_12640160
ES.30033.7	chr7	+	2211	7	Fusion	ENSMUSG00000012848.16_ENSMUSG00000054715.12	novel	2995	2	NA	NA	2	0	multi-exon	FALSE	canonical	1	21	junction_1	7870.12038592097	1306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12631764	12660612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_12631908_12640160_12641568_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ES.30033.8	chr7	+	3939	3	NNC	ENSMUSG00000054715.12	novel	2620	3	NA	NA	2	-140	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTTCCATGTCTCCTCT	NA	False	NA	9	True	AATACA	-13	NA	12631764	12642870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12631871_12637527_12638013_12639522
ES.30033.9	chr7	+	2820	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-26	-707	0	-133	multi-exon	FALSE	canonical	3	22	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTCCTCTTGTGGCT	NA	False	NA	16	True	AATACA	-20	NA	12631767	12642877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12631871_12640160
ES.30034.1	chr7	-	3831	2	Intergenic	novelGene_24861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGACCAGCATTAAATAC	NA	False	NA	NA	False	NA	NA	NA	12651399	12646625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12650152_12651094
ES.30035.1	chr7	-	176	1	Intergenic	novelGene_24862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGCTAGAAATG	NA	False	NA	NA	False	NA	NA	NA	12666333	12666157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12666200_12666300
ES.30036.1	chr7	+	317	1	Intergenic	novelGene_24863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTCCATGATCA	NA	False	NA	NA	False	NA	NA	NA	12668482	12668799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12668500_12668800
ES.30037.1	chr7	+	180	1	Intergenic	novelGene_24864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAACAGCC	NA	False	NA	NA	False	NA	NA	NA	12681507	12681687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12681500_12681700
ES.30038.1	chr7	+	182	1	Intergenic	novelGene_24865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACTGTCT	NA	False	NA	NA	False	NA	NA	NA	12687806	12687988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12687800_12688000
ES.30039.1	chr7	-	201	1	Intergenic	novelGene_24866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAGCAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	12690064	12689863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12689900_12690100
ES.3004.1	chr10	-	179	1	Intergenic	novelGene_2343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67122011	67121832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67121800_67122000
ES.30040.1	chr7	+	179	1	Intergenic	novelGene_24867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGCTAATGGAAAG	NA	False	NA	NA	False	NA	NA	NA	12693877	12694056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12693900_12694100
ES.30041.1	chr7	+	3927	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-14	402	-14	-379	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACTATGTCCTTCTAC	NA	False	NA	NA	False	NA	NA	NA	12699750	12707347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ES.30041.2	chr7	+	4316	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-8	7	-8	-7	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGCCACTGGAGTCAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	12699756	12707742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ES.30041.3	chr7	+	3507	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	-1	809	-1	-786	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACATGTCTCCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	12699763	12706940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ES.30042.1	chr7	+	3601	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	-16	-991	-16	47	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCAACACTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	12711758	12718314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.10	chr7	+	3496	2	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	1	-186	intron_retention	FALSE	canonical	3	36	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTGGCTAACATGGTA	NA	False	NA	NA	False	NA	NA	NA	12711775	12717137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713907_12715772
ES.30042.11	chr7	+	3152	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	1	-163	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCCAGACTAAGACTTTAA	NA	False	NA	NA	False	NA	NA	NA	12711775	12718073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.12	chr7	+	4246	3	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	2	-157	intron_retention	FALSE	canonical	3	27	junction_2	4.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAGACTTTAAATACTT	NA	False	NA	NA	False	NA	NA	NA	12711776	12718079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713907_12715772_12715855_12716045
ES.30042.13	chr7	+	2353	5	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	10	2443	10	-125	intron_retention	FALSE	canonical	2	6	junction_1	12.051970793194	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCCTGACTTCTAGCT	NA	False	NA	NA	False	NA	NA	NA	12711784	12717198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.14	chr7	+	3379	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	11	43	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTCAACACTGTC	NA	False	NA	NA	False	NA	NA	NA	12711785	12718310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.15	chr7	+	6526	1	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	12	45	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTCAACACTGTCCA	NA	False	NA	NA	False	NA	NA	NA	12711786	12718312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12711800_12718300
ES.30042.16	chr7	+	4754	6	NNC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	13	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.0322676461159	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAAAGTATTTGGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	12711787	12719694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12712146_12712924_12713306_12713384_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.17	chr7	+	3054	5	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	-15	39	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	13.1410616009514	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGAGTTTTCAACAC	NA	False	NA	NA	False	NA	NA	NA	12711804	12718306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712040_12712924_12713306_12713811_12713907_12715772_12715855_12716045
ES.30042.18	chr7	+	3505	5	NIC	ENSMUSG00000033961.17	novel	2594	5	NA	NA	-15	26	intron_retention	FALSE	canonical	0	0	junction_3	13.2003787824441	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCGTCTAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	12711804	12718293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713840_12713907_12715772
ES.30042.19	chr7	+	3016	6	FSM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	30	1569	-15	-164	multi-exon	FALSE	canonical	2	6	junction_1	10.7962956610126	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGCCAGACTAAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	12711804	12718072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.2	chr7	+	4787	5	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	-8	27	-8	-27	intron_retention	FALSE	canonical	2	6	junction_1	12.051970793194	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTCAAAATAAAACAAAGTA	NA	False	NA	NA	False	NA	NA	NA	12711766	12719614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.20	chr7	+	4417	3	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	-14	59	intron_retention	FALSE	canonical	3	35	junction_1	0.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATTTGTGCTCACTAA	NA	False	NA	NA	False	NA	NA	NA	12711805	12718326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713574_12713811_12713907_12715772
ES.30042.21	chr7	+	3431	5	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	-14	43	intron_retention	FALSE	canonical	3	25	junction_1	4.81534007106456	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTCAACACTGTC	NA	False	NA	NA	False	NA	NA	NA	12711805	12718310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.22	chr7	+	3012	3	FSM	ENSMUSG00000033961.17	ENSMUST00000147996.2	3261	3	-8	257	-8	-257	multi-exon	FALSE	canonical	3	25	junction_1	5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATAAAATGA	NA	False	NA	NA	False	NA	NA	NA	12711811	12715133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12713306_12713377_12713574_12713811
ES.30042.23	chr7	+	4676	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATCTTTTGGTGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	12711819	12719641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.24	chr7	+	4154	3	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	1	-158	intron_retention	FALSE	canonical	3	35	junction_1	0.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAAGACTTTAAATACT	NA	False	NA	NA	False	NA	NA	NA	12711820	12718078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713574_12713811_12713907_12715772
ES.30042.25	chr7	+	4192	4	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	1	40	intron_retention	FALSE	canonical	3	27	junction_3	4.02768199119819	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711820	12718307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.26	chr7	+	3316	6	NNC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	1	40	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	11.2605506082074	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711820	12718307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12712146_12712924_12713306_12713377_12713549_12713811_12713907_12715772_12715855_12716045
ES.30042.27	chr7	+	2968	5	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	7	54	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	14.5688022843335	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTCCATTTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	12711826	12718321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.28	chr7	+	2889	6	NNC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	-148	-160	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	11.2605506082074	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACTAAGACTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	12712016	12718076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12712146_12712924_12713306_12713377_12713549_12713811_12713907_12715772_12715855_12716045
ES.30042.29	chr7	+	2638	3	NIC	ENSMUSG00000033961.17	novel	2594	5	NA	NA	-108	-10	intron_retention	FALSE	canonical	0	0	junction_1	18	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGTAAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	12712056	12718226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12713811_12713907_12715772
ES.30042.3	chr7	+	6344	2	NIC	ENSMUSG00000033961.17	novel	3540	4	NA	NA	-2	40	intron_retention	FALSE	canonical	3	27	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711772	12718307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12715855_12716045
ES.30042.30	chr7	+	4581	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	304	-2291	-86	-27	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTCAAAATAAAACAAAGTA	NA	False	NA	NA	False	NA	NA	NA	12712078	12719614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.31	chr7	+	4035	4	ISM	ENSMUSG00000033961.17	ENSMUST00000108536.3	3705	5	-86	-53	-86	22	intron_retention	FALSE	canonical	3	25	junction_1	4.96655480858378	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGTGTCGTCTAGAA	NA	False	NA	NA	False	NA	NA	NA	12712078	12718289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.32	chr7	+	2740	4	NNC	ENSMUSG00000033961.17	novel	2594	5	NA	NA	-84	7	intron_retention	TRUE	non_canonical	0	0	junction_2	15.06283137026	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGATGGGCACATCA	NA	False	NA	NA	False	NA	NA	NA	12712080	12718274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12712146_12712924_12713003_12713811_12713907_12715772
ES.30042.33	chr7	+	3293	4	NIC	ENSMUSG00000033961.17	novel	2594	5	NA	NA	-49	24	intron_retention	FALSE	canonical	3	25	junction_1	4.96655480858378	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTCGTCTAGAAAC	NA	False	NA	NA	False	NA	NA	NA	12712115	12718291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713574_12713811_12713907_12715772
ES.30042.34	chr7	+	3704	2	NIC	ENSMUSG00000033961.17	novel	3705	5	NA	NA	344	-158	intron_retention	FALSE	canonical	3	36	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAAGACTTTAAATACT	NA	False	NA	NA	False	NA	NA	NA	12712508	12718078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12713907_12715772
ES.30042.35	chr7	+	4575	4	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	1120	-4	-552	4	intron_retention	FALSE	canonical	3	25	junction_1	4.96655480858378	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGGTGGTTTTTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	12712894	12719645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.36	chr7	+	2426	3	ISM	ENSMUSG00000033961.17	ENSMUST00000108536.3	3705	5	1646	-57	364	26	3prime_fragment	FALSE	canonical	3	27	junction_2	4.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTCGTCTAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	12713810	12718293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12713907_12715772_12715855_12716045
ES.30042.4	chr7	+	2963	5	NNC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	-1	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.4460202131937	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTTTAAATACTTTTG	NA	False	NA	NA	False	NA	NA	NA	12711773	12718082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12712146_12712924_12713306_12713811_12713907_12715772_12715855_12716049
ES.30042.5	chr7	+	3479	5	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	-1	1328	-1	46	intron_retention	FALSE	canonical	2	6	junction_1	12.051970793194	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCAACACTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	12711773	12718313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.6	chr7	+	3351	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	0	-757	0	-156	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGACTTTAAATACTTT	NA	False	NA	NA	False	NA	NA	NA	12711774	12718080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ES.30042.7	chr7	+	3281	6	FSM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	0	1334	0	40	multi-exon	FALSE	canonical	2	6	junction_1	10.7962956610126	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTTTCAACACT	NA	False	NA	NA	False	NA	NA	NA	12711774	12718307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ES.30042.8	chr7	+	3418	4	NIC	ENSMUSG00000033961.17	novel	2594	5	NA	NA	0	-161	intron_retention	FALSE	canonical	3	25	junction_1	4.96655480858378	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGACTAAGACTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	12711774	12718075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713574_12713811_12713907_12715772
ES.30042.9	chr7	+	5233	5	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	1	21	intron_retention	FALSE	canonical	3	25	junction_1	4.12310562561766	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCAAAGTGTCGTCTAGA	NA	False	NA	NA	False	NA	NA	NA	12711775	12718288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12715855_12716045
ES.30043.1	chr7	+	160	1	Intergenic	novelGene_24868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	12720296	12720456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12720300_12720500
ES.30044.1	chr7	-	124	1	Intergenic	novelGene_24869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	12720824	12720700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12720700_12720800
ES.30045.1	chr7	+	141	1	Intergenic	novelGene_24870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAAAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	12723767	12723908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12723800_12723900
ES.30045.2	chr7	+	331	1	Intergenic	novelGene_24871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATTTTAAAGATA	NA	False	NA	NA	False	NA	NA	NA	12723769	12724100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12723800_12724100
ES.30046.1	chr7	+	204	1	Antisense	novelGene_ENSMUSG00000049600.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGTCTAGGATATCAA	NA	False	NA	NA	False	NA	NA	NA	12739259	12739463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_12739300_12739500
ES.30047.1	chr7	-	3909	10	Fusion	ENSMUSG00000030382.16_ENSMUSG00000049600.9	novel	2288	10	NA	NA	2	0	intron_retention	TRUE	canonical	0	0	junction_7	60.8750998173948	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGTGGATTTGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	12743755	12722272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_12722580_12722659_12723480_12724893_12724985_12725071_12725267_12727241_12727367_12728806_12728966_12730157_12730368_12739758_12740308_12740950_12742257_12743608
ES.30047.11	chr7	-	2159	3	FSM	ENSMUSG00000049600.9	ENSMUST00000210282.2	3908	3	-20	1769	2	44	multi-exon	FALSE	canonical	3	10	junction_2	93	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	12743747	12739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12740308_12740950_12742257_12743608
ES.30047.12	chr7	-	1475	4	NNC	ENSMUSG00000049600.9	novel	2722	4	NA	NA	147	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.7007370216222	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACATGCCTCGTAGGCTT	NA	False	NA	-4	True	AATAAA	-13	NA	12743580	12739596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12740308_12740950_12741361_12742138_12742257_12743344
ES.30047.2	chr7	-	3689	11	Fusion	ENSMUSG00000030382.16_ENSMUSG00000049600.9	novel	2288	10	NA	NA	-16	-2	intron_retention	FALSE	canonical	0	0	junction_8	61.0312215181705	169	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAAAGTCTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	12743773	12722280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_12722580_12722659_12722791_12722936_12723480_12724893_12724985_12725071_12725267_12727241_12727367_12728806_12728966_12730157_12730368_12739758_12740308_12740950_12742257_12743692
ES.30047.3	chr7	-	5519	3	NNC	ENSMUSG00000049600.9	novel	3908	3	NA	NA	162	2658	intron_retention	FALSE	non_canonical	0	0	junction_1	6	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	12743565	12735166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12735993_12737784_12742257_12743344
ES.30047.4	chr7	-	4445	4	NNC	ENSMUSG00000049600.9	novel	2722	4	NA	NA	1	2262	intron_retention	FALSE	non_canonical	0	0	junction_1	81.4261765172737	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGATAAGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	12743748	12735562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12735993_12737784_12740308_12740950_12742257_12743562
ES.30047.5	chr7	-	2263	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	-48	-44	-48	44	multi-exon	FALSE	canonical	3	66	junction_2	65	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	12743805	12739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12740308_12740950_12742257_12743562
ES.30047.7	chr7	-	2240	3	NNC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	163	44	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	12743564	12739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12740308_12740950_12742257_12743344
ES.30047.8	chr7	-	2382	4	NNC	ENSMUSG00000049600.9	novel	2722	4	NA	NA	-689	44	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.8262000988536	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	12744650	12739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12740308_12740950_12742257_12743692_12743896_12744491
ES.30047.9	chr7	-	3628	2	ISM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	-107	-44	97	44	intron_retention	FALSE	canonical	3	196	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCGTAGGCTTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	12743864	12739593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_12740308_12740950
ES.30048.1	chr7	+	136	1	Intergenic	novelGene_24872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12744821	12744957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12744800_12745000
ES.30049.1	chr7	-	178	1	Intergenic	novelGene_24873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCTCACAAAAT	NA	False	NA	NA	False	NA	NA	NA	12749843	12749665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12749700_12749800
ES.3005.1	chr10	-	206	1	Intergenic	novelGene_2344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACACCCAACCTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	67122337	67122131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67122100_67122300
ES.30050.1	chr7	+	3397	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	-91	-61	-91	61	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTCCCTCTTTTTGGC	NA	False	NA	119	True	NA	NA	NA	12757987	12765023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.10	chr7	+	3523	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-22	14	intron_retention	FALSE	canonical	3	3307	junction_6	392.926320489393	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGGACTGTTCCTGA	NA	False	NA	72	True	AATAAA	-33	NA	12758056	12764976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.100	chr7	+	3332	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-3	intron_retention	FALSE	canonical	3	3307	junction_6	385.988242656933	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758339	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.101	chr7	+	4127	8	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-2	intron_retention	FALSE	canonical	3	3497	junction_3	350.814504156443	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12758339	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.103	chr7	+	3238	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-5	intron_retention	FALSE	canonical	3	3398	junction_5	355.931796538301	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758339	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.104	chr7	+	3602	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	3	3497	junction_4	332.879026496101	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758339	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763052_12763133_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.105	chr7	+	3426	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3307	junction_6	389.023143163951	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.106	chr7	+	3669	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-2	intron_retention	FALSE	canonical	3	3333	junction_4	377.507496246395	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12758339	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.107	chr7	+	3424	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	410.609544880666	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758339	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763923_12764009_12764303_12764381_12764520_12764615
ES.30050.108	chr7	+	3412	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-3	intron_retention	FALSE	canonical	3	3398	junction_5	372.220209415771	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758339	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764303_12764381_12764520_12764615
ES.30050.109	chr7	+	3672	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	1	intron_retention	FALSE	canonical	3	3333	junction_4	408.244644790351	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758339	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.11	chr7	+	3355	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-20	8	intron_retention	FALSE	canonical	3	3307	junction_7	392.492921379906	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGTCTGGGGACTGT	NA	False	NA	66	True	AATAAA	-27	NA	12758058	12764970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.110	chr7	+	3362	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	396.729223008451	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758339	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.111	chr7	+	3888	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	1	intron_retention	FALSE	canonical	3	3497	junction_4	335.058576968267	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758339	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.112	chr7	+	3846	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	3	3497	junction_3	341.218419784161	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758339	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.113	chr7	+	3608	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3497	junction_4	328.009549346982	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.114	chr7	+	4281	6	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3833	junction_1	266.352398149519	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12762915_12763014_12764303_12764381_12764520_12764615
ES.30050.115	chr7	+	4021	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	3	3497	junction_3	363.712455107053	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758339	12764961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12762706_12762807_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.116	chr7	+	3793	10	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	2	199	junction_1	1246.11253281734	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758993_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.117	chr7	+	3491	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-3	intron_retention	FALSE	canonical	3	3307	junction_5	369.702235664806	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758339	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.118	chr7	+	3658	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	3	3307	junction_4	373.613704245441	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758339	12764961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.12	chr7	+	3254	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1005.2443033288	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758059	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762474_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.120	chr7	+	4095	8	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-4	intron_retention	FALSE	canonical	3	3497	junction_3	385.396906461643	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGCTCATGCCTCAG	NA	False	NA	51	True	AATAAA	-12	NA	12758339	12764955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12762706_12762807_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.121	chr7	+	3675	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	3	3307	junction_6	394.943590908879	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758339	12764961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12764520_12764615
ES.30050.123	chr7	+	2983	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1008.56717674134	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTGGGGACTGTTCCT	NA	False	NA	70	True	AATAAA	-31	NA	12758339	12764974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763167_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.125	chr7	+	3700	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	263	-3	intron_retention	FALSE	canonical	3	3497	junction_4	343.962149080389	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758341	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.126	chr7	+	3153	15	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	264	0	intron_retention	FALSE	canonical	2	3	junction_5	1068.10705389087	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758342	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761957_12762063_12762334_12762482_12762590_12762706_12762807_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.127	chr7	+	2994	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	264	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1006.87826465951	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758342	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762313_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.13	chr7	+	4027	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	3497	junction_3	329.177863951546	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758069	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.130	chr7	+	3614	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	266	-1	intron_retention	FALSE	canonical	3	3497	junction_4	334.360942200822	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758344	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12763052_12763133_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.131	chr7	+	3738	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	268	0	intron_retention	FALSE	canonical	3	3497	junction_3	344.493663653659	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758346	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.132	chr7	+	3417	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	268	-1	intron_retention	FALSE	canonical	3	3307	junction_6	392.838163224001	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758346	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.133	chr7	+	3226	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	270	0	intron_retention	FALSE	canonical	3	3307	junction_7	390.530408547145	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758348	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.135	chr7	+	3119	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	319	-3	intron_retention	FALSE	canonical	3	3333	junction_5	370.622759139043	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758397	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.136	chr7	+	3746	10	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	439	-3	intron_retention	FALSE	canonical	3	3497	junction_3	358.03386280292	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758517	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.137	chr7	+	5752	3	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	444	1591	intron_retention	FALSE	canonical	0	0	junction_1	2185.5	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAGGGACAAACCTGTC	NA	False	NA	NA	False	NA	NA	NA	12758522	12766553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12761543_12764303_12764381
ES.30050.138	chr7	+	3829	8	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	513	0	intron_retention	FALSE	canonical	3	3497	junction_3	353.648274477363	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758591	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12764134_12764215_12764520_12764615
ES.30050.14	chr7	+	3898	13	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-8	0	intron_retention	FALSE	canonical	1	41	junction_5	1138.37803718956	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758070	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762214_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.140	chr7	+	2751	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	556	-3	intron_retention	FALSE	canonical	2	23	junction_5	1015.03822369187	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758634	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761866_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.141	chr7	+	3226	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	556	-3	intron_retention	FALSE	canonical	3	3333	junction_5	374.19079357996	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758634	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763180_12763269_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.142	chr7	+	3483	10	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	557	4	intron_retention	FALSE	canonical	3	3497	junction_4	343.813903151109	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTCAGCTGTCTGGGGA	NA	False	NA	62	True	AATAAA	-23	NA	12758635	12764966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.144	chr7	+	3575	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	561	0	intron_retention	FALSE	canonical	3	3497	junction_4	363.870834740846	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758639	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.145	chr7	+	2788	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	562	1	intron_retention	FALSE	canonical	0	0	junction_4	1040.4084753382	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	59	True	AATAAA	-20	NA	12758640	12764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761737_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.146	chr7	+	3229	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	572	6	intron_retention	FALSE	canonical	3	3333	junction_5	360.972634773823	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTGTCTGGGGACT	NA	False	NA	64	True	AATAAA	-25	NA	12758650	12764968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.147	chr7	+	3358	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	652	-5	intron_retention	FALSE	canonical	3	3307	junction_5	407.683944186066	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758730	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.148	chr7	+	2840	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-793	-3	intron_retention	FALSE	canonical	3	3307	junction_6	415.96126640341	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758891	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.149	chr7	+	3120	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-751	-7	intron_retention	FALSE	canonical	3	3333	junction_5	382.385146155025	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCAGTTGCTCATGCCT	NA	False	NA	48	True	AATAAA	-9	NA	12758933	12764952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.15	chr7	+	3631	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	3333	junction_5	353.02841418856	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758070	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.150	chr7	+	2460	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-559	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1039.33367543291	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12759125	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763202_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.151	chr7	+	2947	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-112	-5	intron_retention	FALSE	canonical	3	3333	junction_3	408.14088789902	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12759572	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759704_12761543_12761680_12761759_12761877_12761947_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.152	chr7	+	4694	2	ISM	ENSMUSG00000005566.15	ENSMUST00000149061.3	783	5	-2537	-1104	477	-2	intron_retention	FALSE	canonical	3	3512	junction_1	0	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12760161	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12762706_12762807
ES.30050.153	chr7	+	4215	5	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	681	-2	intron_retention	FALSE	canonical	3	3512	junction_1	409.475884515804	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12760365	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12762706_12762807_12762915_12763014_12764303_12764381_12764520_12764615
ES.30050.154	chr7	+	1627	11	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-265	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1241.6342819043	3658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGGGGACTGTTCC	NA	False	NA	69	True	AATAAA	-30	NA	12762433	12764973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763530_12763615_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.155	chr7	+	1661	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-88	7	intron_retention	FALSE	canonical	3	3512	junction_1	364.706046015144	3658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTGTCTGGGGACTG	NA	False	NA	65	True	AATAAA	-26	NA	12762610	12764969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12762706_12762807_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.156	chr7	+	1610	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-68	-1	intron_retention	FALSE	canonical	3	3512	junction_1	362.658586000663	3658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12762630	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.157	chr7	+	3889	3	Antisense	novelGene_ENSMUSG00000005575.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCTATAGCTGAAATTC	NA	False	NA	NA	False	ATTAAA	-21	NA	12768580	12774297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_12768802_12770505_12770623_12770746
ES.30050.16	chr7	+	3252	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	992.749897695789	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12758072	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763929_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.17	chr7	+	3329	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-5	0	intron_retention	FALSE	canonical	3	3307	junction_7	367.76238705628	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758073	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.18	chr7	+	3789	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	3307	junction_5	394.500433099859	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758076	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.19	chr7	+	4786	5	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	3497	junction_2	411.89948713248	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12758076	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759704_12761543_12761680_12761759_12764303_12764381_12764520_12764615
ES.30050.2	chr7	+	3392	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	3333	junction_5	365.272257668471	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758036	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.20	chr7	+	3231	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	999.645841582783	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758079	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759691_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.21	chr7	+	3714	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	3333	junction_5	348.482305375414	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCTCAGCTGTCTGGG	NA	False	NA	60	True	AATAAA	-21	NA	12758079	12764964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.23	chr7	+	3935	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	10	-1	intron_retention	FALSE	canonical	3	3497	junction_4	342.047072783849	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758088	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.24	chr7	+	4030	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	10	0	intron_retention	FALSE	canonical	3	3333	junction_4	382.138112715917	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758088	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.25	chr7	+	3326	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	10	1	intron_retention	FALSE	canonical	3	3307	junction_7	388.042723879157	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	59	True	AATAAA	-20	NA	12758088	12764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.27	chr7	+	3426	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	1	intron_retention	FALSE	canonical	3	3333	junction_5	376.790528066745	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	59	True	AATAAA	-20	NA	12758089	12764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.28	chr7	+	3879	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	12	intron_retention	FALSE	canonical	3	3333	junction_5	379.199592007313	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTGGGGACTGTTCCT	NA	False	NA	70	True	AATAAA	-31	NA	12758089	12764974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.29	chr7	+	3945	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	0	intron_retention	FALSE	canonical	3	3497	junction_4	329.525128025163	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758089	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.3	chr7	+	3264	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	1007.1607291664	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758036	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763154_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.30	chr7	+	3861	12	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	1527.14792238981	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758089	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761866_12761947_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764613
ES.30050.31	chr7	+	3118	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	992.749897695789	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGGGGACTGTTCC	NA	False	NA	69	True	AATAAA	-30	NA	12758089	12764973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763796_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.32	chr7	+	3413	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	11	7	intron_retention	FALSE	canonical	3	3307	junction_7	400.843472936654	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCTGTCTGGGGACTG	NA	False	NA	65	True	AATAAA	-26	NA	12758089	12764969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.33	chr7	+	3218	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1006.87826465951	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758092	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762341_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.34	chr7	+	3319	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	21	8	intron_retention	FALSE	canonical	3	3307	junction_7	373.05117909239	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGTCTGGGGACTGT	NA	False	NA	66	True	AATAAA	-27	NA	12758099	12764970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.35	chr7	+	3649	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	28	-3	intron_retention	FALSE	canonical	3	3333	junction_4	372.572871232861	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758106	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.37	chr7	+	3546	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	30	0	intron_retention	FALSE	canonical	3	3307	junction_7	396.828984646479	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758108	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.38	chr7	+	3195	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	992.749897695789	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758108	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763929_12764033_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.39	chr7	+	3837	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	30	-1	intron_retention	FALSE	canonical	3	3333	junction_4	366.197686451089	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGCCTCAGCTGTCT	NA	False	NA	57	True	AATAAA	-18	NA	12758108	12764961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.4	chr7	+	3539	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-34	1	intron_retention	FALSE	canonical	3	3307	junction_7	396.070775457616	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	59	True	AATAAA	-20	NA	12758044	12764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.40	chr7	+	3694	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	32	-1	intron_retention	FALSE	canonical	3	3307	junction_5	401.4690385184	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758110	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.41	chr7	+	3464	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	32	-3	intron_retention	FALSE	canonical	3	3307	junction_7	387.359793302629	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758110	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.42	chr7	+	3855	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	32	2	intron_retention	FALSE	canonical	3	3333	junction_5	366.191410003472	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCCTCAGCTGTCTGGG	NA	False	NA	60	True	AATAAA	-21	NA	12758110	12764964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.43	chr7	+	3728	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	32	-3	intron_retention	FALSE	canonical	3	3333	junction_4	394.785384734542	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758110	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.44	chr7	+	3438	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	32	-2	intron_retention	FALSE	canonical	0	0	junction_6	1036.22704504799	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCTCATGCCTCAGCT	NA	False	NA	53	True	AATAAA	-14	NA	12758110	12764957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762602_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.45	chr7	+	3240	18	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1292.5770642898	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758118	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762174_12762214_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.46	chr7	+	3184	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	41	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1338.40669617833	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758119	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762477_12762590_12762706_12762816_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.47	chr7	+	4002	10	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	45	1	intron_retention	FALSE	canonical	3	3497	junction_4	360.395153500525	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758123	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.48	chr7	+	3493	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	116	-1	intron_retention	FALSE	canonical	3	3333	junction_5	379.953140385612	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758194	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.49	chr7	+	3057	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	184	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	999.645841582783	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758262	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759717_12761554_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.5	chr7	+	3839	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-27	14	intron_retention	FALSE	canonical	3	3333	junction_5	366.569106339067	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGGACTGTTCCTGA	NA	False	NA	72	True	AATAAA	-33	NA	12758051	12764976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.50	chr7	+	3126	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	190	0	intron_retention	FALSE	canonical	3	3307	junction_6	367.95050391776	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758268	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.51	chr7	+	3405	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	193	-5	intron_retention	FALSE	canonical	3	3333	junction_5	393.256516157075	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758271	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.52	chr7	+	3514	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	194	0	intron_retention	FALSE	canonical	3	3333	junction_5	363.860367261818	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758272	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.54	chr7	+	3333	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	194	1	intron_retention	FALSE	canonical	3	3333	junction_5	382.713961505667	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCCTCAGCTGTCTGG	NA	False	NA	59	True	AATAAA	-20	NA	12758272	12764963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.55	chr7	+	3018	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	194	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1310.23354311359	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758272	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764231_12764290_12764381_12764520_12764615
ES.30050.56	chr7	+	3371	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	194	0	intron_retention	FALSE	canonical	3	3307	junction_6	396.429156834975	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758272	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.57	chr7	+	3311	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	202	-1	intron_retention	FALSE	canonical	3	3307	junction_7	413.330218859552	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758280	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.58	chr7	+	3405	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	214	-3	intron_retention	FALSE	canonical	3	3307	junction_5	393.555616995412	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758292	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.59	chr7	+	3736	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	223	-3	intron_retention	FALSE	canonical	3	3333	junction_5	378.282645650048	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758301	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.6	chr7	+	3233	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1040.88561437952	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758054	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763062_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.62	chr7	+	3487	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	225	-1	intron_retention	FALSE	canonical	3	3333	junction_5	355.66171348329	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758303	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763052_12763133_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.63	chr7	+	3012	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1000.18932387511	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763517_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.64	chr7	+	6140	5	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3885	junction_1	280.178849130337	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12762915_12763014_12764303_12764381_12764520_12764615
ES.30050.65	chr7	+	3114	16	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	227	0	227	0	intron_retention	FALSE	canonical	3	3307	junction_7	338.348433160584	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381
ES.30050.66	chr7	+	3969	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	29	intron_retention	FALSE	canonical	3	3333	junction_5	395.116043081017	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGGTTTTAAGACTCAT	NA	False	NA	87	True	NA	NA	NA	12758305	12764991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.67	chr7	+	3353	13	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	-3	intron_retention	FALSE	canonical	2	23	junction_5	1137.72736433451	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758305	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761866_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.68	chr7	+	3462	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3333	junction_5	365.971750704955	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758305	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764520_12764615
ES.30050.70	chr7	+	3429	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	241	-3	intron_retention	FALSE	canonical	3	3398	junction_5	351.030760819223	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758319	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.71	chr7	+	3896	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	247	-3	intron_retention	FALSE	canonical	3	3333	junction_5	395.068981318453	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758325	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762915_12763014_12764303_12764381_12764520_12764615
ES.30050.73	chr7	+	3221	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	249	1	intron_retention	FALSE	canonical	3	3307	junction_6	393.001012155892	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758327	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.74	chr7	+	3575	12	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	253	-7	intron_retention	FALSE	canonical	3	3307	junction_6	419.312601588886	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCAGTTGCTCATGCCT	NA	False	NA	48	True	AATAAA	-9	NA	12758331	12764952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.75	chr7	+	2981	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	253	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	1006.64765240562	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758331	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764224_12764303_12764381_12764520_12764615
ES.30050.76	chr7	+	3165	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	-3	intron_retention	FALSE	canonical	3	3398	junction_5	345.597094954249	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758332	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.77	chr7	+	3486	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	-3	intron_retention	FALSE	canonical	3	3307	junction_6	412.014866236644	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758332	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.78	chr7	+	3456	13	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	4438	intron_retention	FALSE	non_canonical	0	0	junction_12	1130.46851152766	3661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGGGCAGGTGACAGGGA	NA	False	NA	NA	False	NA	NA	NA	12758332	12769400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12764134_12764215_12764303_12764381_12764520_12764615_12764965_12769385
ES.30050.79	chr7	+	3437	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	-3	intron_retention	FALSE	canonical	3	3497	junction_4	324.729126992267	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758332	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.8	chr7	+	3530	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-22	11	intron_retention	FALSE	canonical	3	3307	junction_7	409.463698891683	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGGGGACTGTTCC	NA	False	NA	69	True	AATAAA	-30	NA	12758056	12764973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.80	chr7	+	3869	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	-3	intron_retention	FALSE	canonical	3	3512	junction_4	331.907531362276	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758332	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12762706_12762807_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.81	chr7	+	4134	8	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	254	-3	intron_retention	FALSE	canonical	3	3333	junction_4	420.126074372142	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758332	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759704_12761543_12761680_12761759_12761877_12761947_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.82	chr7	+	3091	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	255	8	intron_retention	FALSE	canonical	0	0	junction_4	1375.56489244722	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCTGTCTGGGGACTGT	NA	False	NA	66	True	AATAAA	-27	NA	12758333	12764970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761737_12761866_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.85	chr7	+	2993	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	255	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1000.18932387511	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758333	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763530_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.86	chr7	+	6027	6	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	255	0	intron_retention	FALSE	canonical	3	3866	junction_3	288.479739323232	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTCATGCCTCAGCTGT	NA	False	NA	55	True	AATAAA	-16	NA	12758333	12764959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12762915_12763014_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.87	chr7	+	3071	17	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	256	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1006.10894780026	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758334	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12759073_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.88	chr7	+	3264	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	256	-1	intron_retention	FALSE	canonical	3	3333	junction_5	379.29986888021	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758334	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.89	chr7	+	3495	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	256	-5	intron_retention	FALSE	canonical	3	3307	junction_6	430.146123427842	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758334	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.9	chr7	+	3803	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	3497	junction_4	321.151790003142	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758056	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763052_12763133_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.91	chr7	+	3719	11	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	256	1	intron_retention	FALSE	canonical	3	3333	junction_5	376.052974991556	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758334	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.93	chr7	+	3325	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	257	-3	intron_retention	FALSE	canonical	3	3307	junction_5	356.177867742211	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758335	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.95	chr7	+	4004	9	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	258	-5	intron_retention	FALSE	canonical	3	3497	junction_3	356.134454946443	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTTGCTCATGCCTCA	NA	False	NA	50	True	AATAAA	-11	NA	12758336	12764954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764520_12764615
ES.30050.97	chr7	+	3419	16	NNC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-1	intron_retention	FALSE	canonical	0	0	junction_3	1367.45246352478	3660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	False	NA	54	True	AATAAA	-15	NA	12758339	12764958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761223_12761320_12761543_12761680_12761759_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.98	chr7	+	3151	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	1	intron_retention	FALSE	canonical	3	3307	junction_7	385.933694209939	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCATGCCTCAGCTGTC	NA	False	NA	56	True	AATAAA	-17	NA	12758339	12764960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
ES.30050.99	chr7	+	4030	7	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	-3	intron_retention	FALSE	canonical	3	3497	junction_4	380.293746113887	3660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGCTCATGCCTCAGC	NA	False	NA	52	True	AATAAA	-13	NA	12758339	12764956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762706_12762807_12764520_12764615
ES.30051.1	chr7	-	1552	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	45	-648	-23	644	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTCGTGTCTAAAT	6980	False	NA	NA	False	ATTAAA	-30	NA	12768689	12765292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ES.30051.10	chr7	-	912	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	12	6	5	-2	multi-exon	FALSE	canonical	3	206	junction_5	1091.38616447159	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	7103	False	NA	-13	True	AATAAA	-15	NA	12768566	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
ES.30051.11	chr7	-	754	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	-25	-3	-25	-2	multi-exon	FALSE	canonical	3	151	junction_3	1108.87882115225	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	6978	False	NA	-13	True	AATAAA	-15	NA	12768691	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
ES.30051.14	chr7	-	1159	3	NIC	ENSMUSG00000033916.6	novel	949	6	NA	NA	33	2	intron_retention	FALSE	canonical	3	2610	junction_2	61	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTACCAAGGCTGTGAG	6968	False	NA	-14	True	AATAAA	-14	NA	12768701	12765943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12766749_12767755_12767970_12768561
ES.30051.16	chr7	-	964	5	NIC	ENSMUSG00000033916.6	novel	949	6	NA	NA	0	2	intron_retention	FALSE	canonical	3	2610	junction_4	224.667949427594	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTACCAAGGCTGTGAG	7003	False	NA	-14	True	AATAAA	-14	NA	12768666	12765943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ES.30051.18	chr7	-	1515	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	-41	-2	-39	2	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTCTTCCTTCTG	8402	False	NA	-1	True	ATTAAA	-19	NA	12772241	12769162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ES.30051.19	chr7	-	993	5	NIC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-27	2	intron_retention	FALSE	canonical	3	1870	junction_4	208.329516631705	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTCTTCCTTCTG	9042	False	NA	-1	True	ATTAAA	-19	NA	12771601	12769162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12769682_12769768_12769833_12770138_12770400_12770492_12770588_12771547
ES.30051.2	chr7	-	2839	11	Fusion	ENSMUSG00000033916.6_ENSMUSG00000005575.17	novel	949	6	NA	NA	15	1	intron_retention	FALSE	canonical	0	0	junction_7	847.683083469288	985	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTGTGAGCTTATGAC	8458	False	NA	-6	True	AATAAA	-22	NA	12772185	12765935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561_12769682_12769768_12769831_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ES.30051.20	chr7	-	1074	6	NNC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-141	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	893.110519476733	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8829	False	NA	-4	True	ATTAAA	-16	NA	12771814	12769165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770503_12770588_12771547
ES.30051.21	chr7	-	1475	5	NIC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-66	-1	intron_retention	FALSE	canonical	0	0	junction_1	949.341976054994	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8375	False	NA	-4	True	ATTAAA	-16	NA	12772268	12769165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12769682_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ES.30051.23	chr7	-	984	6	NIC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	140	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	918.473429120299	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	9335	False	NA	-4	True	ATTAAA	-16	NA	12771308	12769165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771142
ES.30051.24	chr7	-	1963	3	ISM	ENSMUSG00000005575.17	ENSMUST00000156389.2	415	4	19	-1203	19	-1	intron_retention	FALSE	canonical	3	1870	junction_2	209.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8462	False	NA	-4	True	ATTAAA	-16	NA	12772181	12769165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_12770400_12770492_12770588_12771547
ES.30051.25	chr7	-	1061	7	NNC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-165	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1040.83050439968	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTCTGCCTCTTCCTT	8805	False	NA	-4	True	ATTAAA	-16	NA	12771838	12769165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12769682_12769768_12769833_12770138_12770234_12770355_12770400_12770492_12770588_12771547_12771675_12771718
ES.30051.26	chr7	-	1129	6	NNC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-135	-2	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_5	910.916593327841	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGCCTCTTCCT	8835	False	NA	-5	True	ATTAAA	-15	NA	12771808	12769166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770639_12771547
ES.30051.27	chr7	-	1067	7	NNC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-165	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	840.033679880357	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGCCTCTTCCT	8805	False	NA	-5	True	ATTAAA	-15	NA	12771838	12769166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547_12771676_12771716
ES.30051.29	chr7	-	1367	7	NNC	ENSMUSG00000005575.17	novel	1472	6	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	840.033679880357	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCCTCTGCCTCTTCC	8424	False	NA	-6	True	ATTAAA	-14	NA	12772219	12769167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547_12771630_12771750
ES.30051.3	chr7	-	3014	9	Fusion	ENSMUSG00000033916.6_ENSMUSG00000005575.17	novel	1472	6	NA	NA	-158	-1	intron_retention	FALSE	canonical	3	151	junction_3	882.729715145015	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGGCTGTGAGCTTATG	8812	False	NA	-8	True	AATAAA	-20	NA	12771831	12765937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ES.30051.4	chr7	-	2543	5	ISM	ENSMUSG00000033916.6_ENSMUSG00000005575.17	ENSMUST00000005711.6	949	6	-1004	2	837	-2	intron_retention	FALSE	canonical	3	2686	junction_3	201.515508088087	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	5931	False	NA	-13	True	AATAAA	-15	NA	12769738	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755
ES.30051.5	chr7	-	725	5	NNC	ENSMUSG00000033916.6	novel	949	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1497.24430204292	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	6999	False	NA	-13	True	AATAAA	-15	NA	12768670	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767992_12768561
ES.30051.6	chr7	-	886	6	NNC	ENSMUSG00000033916.6	novel	949	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1108.46842084022	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	6998	False	NA	-13	True	AATAAA	-15	NA	12768671	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12766130_12766215_12766280_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ES.30051.7	chr7	-	712	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	-108	2	-13	-2	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	6990	False	NA	-13	True	AATAAA	-15	NA	12768679	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
ES.30051.8	chr7	-	3516	7	Fusion	ENSMUSG00000033916.6_ENSMUSG00000005575.17	novel	949	6	NA	NA	-133	-2	intron_retention	FALSE	canonical	3	1870	junction_6	449.978301946019	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACCAAGGCTGTGAGC	8837	False	NA	-13	True	AATAAA	-15	NA	12771806	12765942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_12766130_12766215_12766278_12766361_12766749_12767755_12770243_12770360_12770400_12770492_12770588_12771547
ES.30052.1	chr7	+	4067	1	Antisense	novelGene_ENSMUSG00000030380.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTCCGAGGCATTCA	NA	False	NA	NA	False	NA	NA	NA	12777023	12781090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_12777000_12781100
ES.30053.1	chr7	-	3421	1	NIC	ENSMUSG00000030380.18	novel	3597	7	NA	NA	5818	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCTTCTGCCCACTTT	154	False	NA	NA	False	AATAAA	-24	NA	12780489	12777068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12777100_12780500
ES.30053.2	chr7	-	2499	6	NNC	ENSMUSG00000030380.18	novel	3340	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.9496835316263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCACATTTCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	12788302	12777075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109_12786294_12786669_12787109_12788170
ES.30053.3	chr7	-	2917	5	NIC	ENSMUSG00000030380.18	novel	3340	6	NA	NA	11	0	intron_retention	FALSE	canonical	2	4	junction_4	1.78535710713571	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCACATTTCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	12788581	12777075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109_12787109_12788407
ES.30053.4	chr7	-	2538	6	FSM	ENSMUSG00000030380.18	ENSMUST00000182515.8	3340	6	14	788	14	0	multi-exon	FALSE	canonical	2	4	junction_5	2.63818119165458	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCACATTTCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	12788578	12777075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109_12786294_12786669_12787109_12788407
ES.30053.5	chr7	-	3939	4	ISM	ENSMUSG00000030380.18	ENSMUST00000182490.2	2872	5	-693	2	-36	0	intron_retention	FALSE	canonical	2	7	junction_1	0.942809041582063	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCACATTTCTTCTGC	NA	False	NA	NA	False	AATAAA	-17	NA	12788304	12777075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109
ES.30053.6	chr7	-	2339	5	FSM	ENSMUSG00000030380.18	ENSMUST00000182087.2	2197	5	-132	-10	19	10	multi-exon	FALSE	canonical	0	0	junction_3	3.39116499156263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTCCCCAACCTGCACA	NA	False	NA	NA	False	AATAAA	-7	NA	12788573	12777085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12778628_12785417_12785539_12785659_12785731_12786669_12787109_12788407
ES.30054.1	chr7	-	86	1	Intergenic	novelGene_24874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAAACCAAAA	9337	False	NA	NA	False	NA	NA	NA	12794288	12794202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12794200_12794300
ES.30055.1	chr7	-	4440	1	Intergenic	novelGene_24875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATAAGTTCTGTGACT	1683	False	NA	NA	False	NA	NA	NA	12924999	12920559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_12920600_12925000
ES.30056.1	chr7	+	3802	1	Intergenic	novelGene_24876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	12988600	12992402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_12988600_12992400
ES.30057.1	chr7	+	3333	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	-158	-1	-158	1	multi-exon	TRUE	canonical	3	470	junction_1	193.081793225492	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	949	False	NA	31	True	AATAAA	-19	NA	13011080	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.10	chr7	+	3499	29	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-79	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	346.311681310702	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGGTATCGCTGTGA	1028	False	NA	54	True	AATAAA	-42	NA	13011159	13045374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011456_13012663_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.11	chr7	+	3556	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	405.348616237765	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	1065	False	NA	30	True	AATAAA	-18	NA	13011196	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011325_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034391_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.12	chr7	+	3401	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	-309	-1	-309	1	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2311	False	NA	31	True	AATAAA	-19	NA	13012442	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.13	chr7	+	3401	28	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-302	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	347.18983947761	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGGAGGTCTACATT	2318	False	NA	32	True	AATAAA	-20	NA	13012449	13045352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.14	chr7	+	3398	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-299	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.440058042544	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2321	False	NA	30	True	AATAAA	-18	NA	13012452	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023430_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.15	chr7	+	3391	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-271	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.387720592166	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2349	False	NA	31	True	AATAAA	-19	NA	13012480	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029279_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.16	chr7	+	3249	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-270	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	357.593073496982	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2350	False	NA	29	True	AATAAA	-17	NA	13012481	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.17	chr7	+	4865	24	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-264	0	intron_retention	FALSE	canonical	0	0	junction_1	375.90735595975	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2356	False	NA	30	True	AATAAA	-18	NA	13012487	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.18	chr7	+	3237	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-153	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.706291969766	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2467	False	NA	29	True	AATAAA	-17	NA	13012598	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019313_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.20	chr7	+	3091	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.080062443715	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2607	False	NA	30	True	AATAAA	-18	NA	13012738	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037208_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.22	chr7	+	3099	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.791767474326	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2610	False	NA	30	True	AATAAA	-18	NA	13012741	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012890_13014079_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.23	chr7	+	2916	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	425.223611762094	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2612	False	NA	30	True	AATAAA	-18	NA	13012743	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.24	chr7	+	3752	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	415.633903619681	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2623	False	NA	29	True	AATAAA	-17	NA	13012754	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032009_13032092_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.28	chr7	+	3058	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.146110871497	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2627	False	NA	31	True	AATAAA	-19	NA	13012758	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025212_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.3	chr7	+	3176	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-128	5	at_least_one_novel_splicesite	FALSE	canonical	2	58	junction_1	258.091332288531	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGGTCTACATTGAG	979	False	NA	35	True	AATAAA	-23	NA	13011110	13045355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011325_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.31	chr7	+	3089	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	350.069426780645	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2628	False	NA	30	True	AATAAA	-18	NA	13012759	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042389_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.32	chr7	+	3158	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	349.424182419104	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2628	False	NA	30	True	AATAAA	-18	NA	13012759	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040296_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.33	chr7	+	2889	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	365.966394085577	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2629	False	NA	29	True	AATAAA	-17	NA	13012760	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.34	chr7	+	3755	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	272.840832395896	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2629	False	NA	30	True	AATAAA	-18	NA	13012760	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.35	chr7	+	4503	25	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	283.452805693568	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2633	False	NA	30	True	AATAAA	-18	NA	13012764	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13035406_13037109_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.36	chr7	+	7696	24	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_1	378.990530628719	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2633	False	NA	29	True	AATAAA	-17	NA	13012764	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13021099_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.37	chr7	+	5358	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_1	277.362722801749	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGTGAGGAGGTCT	2637	False	NA	27	True	AATAAA	-15	NA	13012768	13045347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.38	chr7	+	3066	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	349.115794736404	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2637	False	NA	29	True	AATAAA	-17	NA	13012768	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014141_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.39	chr7	+	4071	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_1	277.634337933909	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2637	False	NA	29	True	AATAAA	-17	NA	13012768	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.4	chr7	+	3331	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-126	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	295.086237424158	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	981	False	NA	29	True	AATAAA	-17	NA	13011112	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044901_13045027_13045120
ES.30057.41	chr7	+	2947	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	354.11712241931	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2647	False	NA	29	True	AATAAA	-17	NA	13012778	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.42	chr7	+	3164	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	412.337240617434	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2647	False	NA	29	True	AATAAA	-17	NA	13012778	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13016378_13016473_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041611_13042238_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.43	chr7	+	2931	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	541.686949703692	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGGTGAGGAGGTCTA	2649	False	NA	28	True	AATAAA	-16	NA	13012780	13045348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13021099_13021215_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.44	chr7	+	6988	23	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_1	292.312216334148	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2650	False	NA	29	True	AATAAA	-17	NA	13012781	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13037798_13039835_13039981_13040137_13040221_13041443_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.45	chr7	+	3049	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.788251035359	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGTGAGGAGGTCT	2650	False	NA	27	True	AATAAA	-15	NA	13012781	13045347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032671_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.46	chr7	+	2976	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	357.377835294473	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGTGAGGAGGTCT	2651	False	NA	27	True	AATAAA	-15	NA	13012782	13045347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.47	chr7	+	2913	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	351.602504239737	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2651	False	NA	29	True	AATAAA	-17	NA	13012782	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019253_13020563_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.48	chr7	+	3641	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	23	-1	intron_retention	FALSE	canonical	0	0	junction_1	272.71937860639	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2652	False	NA	29	True	AATAAA	-17	NA	13012783	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.49	chr7	+	3646	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_1	361.456418396464	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGTGAGGAGGTCT	2652	False	NA	27	True	AATAAA	-15	NA	13012783	13045347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.51	chr7	+	4433	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_1	275.643491488553	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2659	False	NA	29	True	AATAAA	-17	NA	13012790	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.52	chr7	+	3641	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_1	353.338507088763	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2659	False	NA	30	True	AATAAA	-18	NA	13012790	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.55	chr7	+	5596	24	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	31	0	intron_retention	FALSE	non_canonical	0	0	junction_1	289.171504111609	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2660	False	NA	30	True	AATAAA	-18	NA	13012791	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012884_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13035406_13037109_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.56	chr7	+	3970	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_1	278.118823526924	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2660	False	NA	29	True	AATAAA	-17	NA	13012791	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.57	chr7	+	3042	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	414.387815943885	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2660	False	NA	30	True	AATAAA	-18	NA	13012791	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030711_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045030_13045120
ES.30057.58	chr7	+	4603	25	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	31	-2	intron_retention	FALSE	canonical	0	0	junction_1	283.772573135405	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGGTGAGGAGGTCTA	2660	False	NA	28	True	AATAAA	-16	NA	13012791	13045348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.6	chr7	+	3273	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-110	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	302.54333884468	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	997	False	NA	31	True	AATAAA	-19	NA	13011128	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030711_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.60	chr7	+	6179	24	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	33	1	intron_retention	FALSE	canonical	0	0	junction_1	288.710162024052	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2662	False	NA	31	True	AATAAA	-19	NA	13012793	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.61	chr7	+	2821	26	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	365.981389690787	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2662	False	NA	30	True	AATAAA	-18	NA	13012793	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.62	chr7	+	3089	29	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.316283657657	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2666	False	NA	29	True	AATAAA	-17	NA	13012797	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034703_13034749_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.63	chr7	+	3037	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	351.719355169853	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2666	False	NA	29	True	AATAAA	-17	NA	13012797	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039974_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.64	chr7	+	3021	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.080062443715	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2666	False	NA	30	True	AATAAA	-18	NA	13012797	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037197_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.65	chr7	+	2828	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	356.141213017347	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2667	False	NA	29	True	AATAAA	-17	NA	13012798	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016428_13020521_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.66	chr7	+	4933	25	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	38	-1	intron_retention	FALSE	canonical	0	0	junction_1	283.718157782606	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2667	False	NA	29	True	AATAAA	-17	NA	13012798	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.7	chr7	+	3177	27	NIC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-79	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	269.294302943143	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGGTGAGGAGGTCTA	1028	False	NA	28	True	AATAAA	-16	NA	13011159	13045348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13011456_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.70	chr7	+	3035	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.067559609647	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGTGAGGAGGTCT	2667	False	NA	27	True	AATAAA	-15	NA	13012798	13045347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037792_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.71	chr7	+	5001	25	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	43	-1	intron_retention	FALSE	canonical	0	0	junction_1	280.136645104769	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2672	False	NA	29	True	AATAAA	-17	NA	13012803	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.72	chr7	+	3672	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_1	272.806930450411	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2673	False	NA	30	True	AATAAA	-18	NA	13012804	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.73	chr7	+	4926	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_1	419.819856055501	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2673	False	NA	30	True	AATAAA	-18	NA	13012804	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032009_13032092_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.74	chr7	+	3857	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	46	1	intron_retention	FALSE	canonical	0	0	junction_1	457.252974379473	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAGGAGGTCTACAT	2675	False	NA	31	True	AATAAA	-19	NA	13012806	13045351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13021099_13021215_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044901_13045027_13045120
ES.30057.76	chr7	+	2790	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	354.505973443468	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2678	False	NA	30	True	AATAAA	-18	NA	13012809	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13016401_13016469_13019182_13019253_13020563_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.78	chr7	+	5703	24	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	54	0	intron_retention	FALSE	non_canonical	0	0	junction_1	289.544665676213	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2683	False	NA	30	True	AATAAA	-18	NA	13012814	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012885_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.79	chr7	+	4606	26	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	61	0	intron_retention	FALSE	canonical	0	0	junction_1	424.668876184728	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2690	False	NA	30	True	AATAAA	-18	NA	13012821	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13035309_13037221_13037728_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.8	chr7	+	3235	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-79	3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	371.18696644731	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGGAGGTCTACATTG	1028	False	NA	33	True	AATAAA	-21	NA	13011159	13045353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025212_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.80	chr7	+	3578	27	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	81	0	intron_retention	FALSE	non_canonical	0	0	junction_1	355.887292261046	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2710	False	NA	30	True	AATAAA	-18	NA	13012841	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040215_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.81	chr7	+	2713	26	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	97	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	362.421663811644	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2726	False	NA	29	True	AATAAA	-17	NA	13012857	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13012886_13016401_13016469_13019182_13019272_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.82	chr7	+	3339	28	FSM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	-173	0	-173	0	multi-exon	FALSE	canonical	3	577	junction_1	177.886980349259	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2886	False	NA	30	True	AATAAA	-18	NA	13013017	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.84	chr7	+	3135	28	NIC	ENSMUSG00000056394.21	novel	3166	28	NA	NA	36	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_6	286.825427374826	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	3095	False	NA	29	True	AATAAA	-17	NA	13013226	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023313_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.85	chr7	+	3586	28	NNC	ENSMUSG00000056394.21	novel	3166	28	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	293.371551008299	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	3103	False	NA	29	True	AATAAA	-17	NA	13013234	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034391_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.86	chr7	+	6892	19	NIC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	7891	-1	intron_retention	FALSE	canonical	3	1002	junction_3	128.991386448002	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	4227	False	NA	29	True	AATAAA	-17	NA	13021081	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.87	chr7	+	2333	21	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	11921	0	-11626	0	3prime_fragment	FALSE	canonical	3	1002	junction_2	130.312662469923	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	73	False	NA	30	True	AATAAA	-18	NA	13025111	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.88	chr7	+	2131	19	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	12873	0	-10674	0	3prime_fragment	FALSE	canonical	3	1081	junction_1	119.559957064785	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	325	False	NA	30	True	AATAAA	-18	NA	13026063	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.89	chr7	+	2077	17	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-7440	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	327.811010482793	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	1394	False	NA	30	True	AATAAA	-18	NA	13029297	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040296_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.91	chr7	+	1484	13	ISM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	19773	1	-3774	-1	3prime_fragment	FALSE	canonical	3	1209	junction_3	85.6665045394056	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	2003	False	NA	29	True	AATAAA	-17	NA	13032963	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30057.92	chr7	+	5121	8	NIC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-2226	-1	intron_retention	FALSE	canonical	3	1209	junction_1	70.2845528359322	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTGAGGAGGTCTAC	3551	False	NA	29	True	AATAAA	-17	NA	13034511	13045349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13034973_13035309_13035406_13037109_13037798_13039835_13039981_13040137_13041597_13042395_13042450_13043037_13045027_13045120
ES.30057.93	chr7	+	3554	9	NIC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-2097	0	intron_retention	FALSE	canonical	3	1286	junction_1	79.4975432010323	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	3680	False	NA	30	True	AATAAA	-18	NA	13034640	13045350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ES.30058.1	chr7	-	4293	3	FSM	ENSMUSG00000070814.18	ENSMUST00000119139.10	3985	3	-302	-6	-10	6	multi-exon	FALSE	canonical	3	9	junction_1	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTCGTGGCTTCTG	1919	False	NA	1	True	AATAAA	-21	NA	13012372	12992887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12995567_13003260_13003574_13011071
ES.30058.10	chr7	-	5026	4	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_1	9.20144916122817	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCAGGCTGAGTTCGTG	1913	False	NA	-6	True	AATAAA	-14	NA	13012378	12992894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12996223_12996294_12996373_13003260_13003574_13011071
ES.30058.11	chr7	-	3447	5	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.18535277187245	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCAGGCTGAGTTCGTG	1905	False	NA	-6	True	AATAAA	-14	NA	13012386	12992894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13000682_13000745_13003260_13003574_13011071_13011355_13012269
ES.30058.13	chr7	-	3095	4	NNC	ENSMUSG00000070814.18	novel	3110	4	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.17856276425687	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCAGGCTGAGTTCG	1690	False	NA	-8	True	AATAAA	-12	NA	13012601	12992896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13003463_13003574_13011071_13011355_13012569
ES.30058.14	chr7	-	3371	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	-27	2	-27	-2	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCAGGCTGAGTTCG	1617	False	NA	-8	True	AATAAA	-12	NA	13012674	12992896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
ES.30058.15	chr7	-	3349	4	NIC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	5.43650214343336	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCAGGCTGAGTTCG	1939	False	NA	-8	True	AATAAA	-12	NA	13012352	12992896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12995567_13003260_13003574_13011071_13011355_13012269
ES.30058.16	chr7	-	4833	2	FSM	ENSMUSG00000070814.18	ENSMUST00000137574.2	4151	2	2	-684	2	575	multi-exon	FALSE	canonical	3	8	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTACTATTTTTAAA	1945	False	NA	NA	False	AATAGA	-16	NA	13012346	13006598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_13011355_13012269
ES.30058.17	chr7	-	4245	2	FSM	ENSMUSG00000070814.18	ENSMUST00000140530.2	4208	2	-37	0	14	0	multi-exon	FALSE	canonical	3	9	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTATATTATTGTTGAG	1658	False	NA	NA	False	NA	NA	NA	13012633	13007173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_13011355_13012569
ES.30058.18	chr7	-	4164	2	FSM	ENSMUSG00000070814.18	ENSMUST00000137574.2	4151	2	-4	-9	-4	9	multi-exon	FALSE	canonical	3	8	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATGGCTTGGTTTTTCG	1939	False	NA	NA	False	NA	NA	NA	13012352	13007273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_13011355_13012269
ES.30058.2	chr7	-	3311	4	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-64	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.78888096369861	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGAGTTCGTGGCTTC	1865	False	NA	-1	True	AATAAA	-19	NA	13012426	12992889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13003260_13003574_13011071_13011355_13012388
ES.30058.3	chr7	-	3991	2	NIC	ENSMUSG00000070814.18	novel	3985	3	NA	NA	-24	3	intron_retention	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTGAGTTCGTGGCTT	1905	False	NA	-2	True	AATAAA	-18	NA	13012386	12992890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12995567_13011071
ES.30058.4	chr7	-	3084	4	NNC	ENSMUSG00000070814.18	novel	3110	4	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42809041582063	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1881	False	NA	-5	True	AATAAA	-15	NA	13012410	12992893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13003463_13003574_13011071_13011355_13012392
ES.30058.5	chr7	-	6903	3	NNC	ENSMUSG00000070814.18	novel	3985	3	NA	NA	11626	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	9600	False	NA	-5	True	AATAAA	-15	NA	13000444	12992893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_12996142_12996223_12996294
ES.30058.6	chr7	-	3031	3	NIC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1677	False	NA	-5	True	AATAAA	-15	NA	13012614	12992893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_12995567_13003260_13003574_13012569
ES.30058.7	chr7	-	3531	6	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.70454411370329	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1918	False	NA	-5	True	AATAAA	-15	NA	13012373	12992893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_12996142_12996223_12996294_12996373_13003260_13003574_13011071_13011355_13012269
ES.30058.8	chr7	-	4820	3	NNC	ENSMUSG00000070814.18	novel	3985	3	NA	NA	-34	0	intron_retention	FALSE	canonical	1	1	junction_2	4	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1895	False	NA	-5	True	AATAAA	-15	NA	13012396	12992893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13003260_13003574_13010562
ES.30058.9	chr7	-	3402	4	NNC	ENSMUSG00000070814.18	novel	3346	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.55902608401044	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCAGGCTGAGTTCGTG	1934	False	NA	-6	True	AATAAA	-14	NA	13012357	12992894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_12995567_13003260_13003574_13011025_13011355_13012269
ES.30059.1	chr7	+	5813	16	FSM	ENSMUSG00000033847.16	ENSMUST00000108528.9	3390	16	-2417	-6	-1405	2	multi-exon	FALSE	canonical	0	0	junction_1	1.78138522878498	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTATTTATTTCTCCC	NA	False	NA	NA	False	CATAAA	-14	NA	13057174	13094599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_13059703_13063572_13063688_13063895_13064033_13069117_13069308_13071661_13071783_13073525_13073667_13074537_13074592_13076315_13076358_13077297_13077442_13077815_13077966_13078361_13078458_13079921_13080077_13082138_13082311_13090100_13090252_13090950_13091078_13093109
ES.30059.2	chr7	+	3618	9	NIC	ENSMUSG00000033847.16	novel	3382	16	NA	NA	10627	1	intron_retention	FALSE	canonical	1	1	junction_3	1.69096865730859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATTGAATTATTTATTT	NA	False	NA	NA	False	CATAAA	-9	NA	13073869	13094594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_13074592_13076315_13076358_13077297_13077966_13078361_13078458_13079921_13080077_13082138_13082311_13090100_13090252_13090950_13091078_13093109
ES.30059.3	chr7	+	3794	19	Fusion	ENSMUSG00000108293.2_ENSMUSG00000033847.16	novel	2154	17	NA	NA	14082	-742	multi-exon	FALSE	non_canonical	0	0	junction_7	1.52752523165195	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGTCTTGCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	13077324	13119878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_13077442_13077815_13077966_13078361_13078458_13079921_13080077_13082138_13082311_13090100_13090252_13090950_13091078_13095643_13095694_13100824_13100872_13105022_13105089_13105304_13106313_13108795_13108882_13109194_13109335_13110591_13110738_13113058_13113197_13113942_13114039_13114693_13114849_13117054_13117227_13119156
ES.30059.4	chr7	+	3623	19	Fusion	ENSMUSG00000005649.18_ENSMUSG00000108293.2	novel	1364	14	NA	NA	12242	-9	multi-exon	FALSE	non_canonical	0	0	junction_1	0.755637250485302	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAGATATATTTCCCA	NA	False	NA	NA	False	AATAAA	-9	NA	13107277	13142803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_13107317_13107525_13107647_13108795_13108882_13109194_13109335_13110591_13110738_13111497_13111552_13112567_13112721_13113058_13113197_13113942_13114039_13114693_13114849_13117054_13117227_13120762_13120913_13122302_13122529_13122793_13123169_13134629_13134661_13135155_13135343_13137232_13137343_13139324_13139473_13141707
ES.30059.5	chr7	+	6753	7	Fusion	ENSMUSG00000005649.18_ENSMUSG00000108293.2	novel	1364	14	NA	NA	-14393	-25	intron_retention	FALSE	non_canonical	0	0	junction_1	0.74535599249993	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAAGTAAAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	13117663	13142787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_13122529_13122793_13123169_13134629_13134661_13135155_13135300_13137232_13137343_13139324_13139473_13141707
ES.3006.1	chr10	-	175	1	Intergenic	novelGene_2345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	67125754	67125579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67125600_67125800
ES.30060.1	chr7	-	332	1	FSM	ENSMUSG00000074547.5	ENSMUST00000092523.3	612	1	360	-80	360	80	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGCTCACGAAGATGC	NA	False	NA	NA	False	NA	NA	NA	13066822	13066490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_13066500_13066800
ES.30061.1	chr7	-	178	1	Intergenic	novelGene_24877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	13110400	13110222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_13110200_13110400
ES.30062.1	chr7	-	5174	4	NNC	ENSMUSG00000074375.4	novel	1018	6	NA	NA	34801	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGTGAATTTTTAAATG	NA	False	NA	NA	False	AATAAA	-17	NA	13822168	13801373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_13801593_13806935_13807114_13816609_13816705_13817486
ES.30063.1	chr7	+	4717	1	Intergenic	novelGene_24878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAATACCTGAAGCGA	NA	False	NA	NA	False	NA	NA	NA	13833365	13838082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_13833400_13838100
ES.30064.1	chr7	+	429	2	Antisense	novelGene_ENSMUSG00000084102.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCTAGAACTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	13848710	13870881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_13848948_13870689
ES.30064.2	chr7	+	393	3	Antisense	novelGene_ENSMUSG00000084102.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTCTAGAACTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	13848764	13870881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_13848899_13869337_13869405_13870689
ES.30064.3	chr7	+	5850	1	Intergenic	novelGene_24879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	13848869	13854719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_13848900_13854700
ES.30065.1	chr7	-	180	1	Intergenic	novelGene_24880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGGCAGTGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	14043770	14043590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_14043600_14043800
ES.30066.1	chr7	-	180	1	Intergenic	novelGene_24881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGATTTATTAG	NA	False	NA	NA	False	NA	NA	NA	14096820	14096640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_14096600_14096800
ES.30067.1	chr7	-	180	1	Intergenic	novelGene_24882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAAACTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	14279204	14279024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_14279000_14279200
ES.30068.1	chr7	-	997	1	ISM	ENSMUSG00000100586.3	ENSMUST00000227855.2	7362	2	1811	5225	1811	-5225	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTAGTTTCATTCA	NA	False	NA	NA	False	AAAAAG	-17	NA	14295620	14294623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_14294600_14295600
ES.30069.1	chr7	-	2934	5	NNC	ENSMUSG00000041596.13	novel	1913	13	NA	NA	20487	-6756	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1.29903810567666	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCGGGGTCATATC	NA	False	NA	NA	False	AATAAA	-13	NA	14322727	14303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14304216_14312660_14312832_14314858_14315030_14316916_14317088_14320542
ES.30069.2	chr7	-	2455	10	NNC	ENSMUSG00000041596.13	novel	555	2	NA	NA	-980	-6756	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.0245407953654	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCGGGGTCATATC	NA	False	NA	NA	False	AATAAA	-13	NA	14344244	14303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14304216_14312660_14312832_14314858_14315030_14316916_14317088_14320542_14320714_14326570_14326739_14332199_14332377_14337064_14337116_14341164_14341246_14343186
ES.30069.3	chr7	-	2043	13	NNC	ENSMUSG00000041596.13	novel	555	2	NA	NA	-581	-6756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.28977194400568	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCGGGGTCATATC	NA	False	NA	NA	False	AATAAA	-13	NA	14356985	14303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14304216_14312660_14312832_14314858_14315030_14316916_14317088_14320542_14320714_14326570_14326739_14332199_14332377_14337064_14337116_14340490_14340568_14341164_14341246_14343186_14343265_14355070_14355159_14356582
ES.30069.4	chr7	-	1823	10	NNC	ENSMUSG00000041596.13	novel	555	2	NA	NA	-570	-6756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.76664435510861	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCGGGGTCATATC	NA	False	NA	NA	False	AATAAA	-13	NA	14356974	14303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14304216_14312660_14312832_14314858_14315030_14316916_14317088_14320542_14320714_14326570_14326739_14332199_14332377_14343186_14343265_14355070_14355159_14356582
ES.30069.5	chr7	-	6417	12	NNC	ENSMUSG00000041596.13	novel	1913	13	NA	NA	-616	-15226	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2.18938083250769	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTTATTTTGCTACT	NA	False	NA	NA	False	NA	NA	NA	14357020	14312449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14312832_14314858_14315030_14316916_14317088_14320542_14320714_14322560_14322752_14326570_14326739_14332199_14332377_14337073_14337116_14340490_14340568_14341164_14341246_14343186_14343265_14352312
ES.30069.6	chr7	-	2270	2	NNC	ENSMUSG00000041596.13	novel	1294	10	NA	NA	16929	-15226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTTATTTTGCTACT	7287	False	NA	NA	False	NA	NA	NA	14326285	14312449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_14313582_14325147
ES.30069.7	chr7	-	1298	1	Genic_Genomic	ENSMUSG00000041596.13	novel	NA	NA	NA	NA	-1118	-13025	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACATCTGCTTTTGCAT	NA	False	NA	NA	False	AATACA	-21	NA	14357522	14356224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_14356200_14357500
ES.3007.1	chr10	-	4947	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-51	-338	-51	338	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTGTTTTCATCTCTT	NA	False	NA	NA	False	AAGAAA	-45	NA	67384949	67380002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67380000_67384900
ES.3007.10	chr10	-	3727	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-51	882	-51	-882	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGTTTTAATGAGCCA	NA	False	NA	7	True	AATAAA	-28	NA	67384949	67381222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67381200_67384900
ES.3007.11	chr10	-	3478	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	116	-887	multi-exon	FALSE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTAATATGTTTTAATG	NA	False	NA	2	True	AATAAA	-23	NA	67384782	67381227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67382354_67382430
ES.3007.12	chr10	-	3182	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-72	1448	-72	-1448	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCTTTAAACCTGACAAA	NA	False	NA	NA	False	AATAAA	-26	NA	67384970	67381788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67381800_67385000
ES.3007.13	chr10	-	2128	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-51	2481	-51	-2481	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	67384949	67382821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67382800_67384900
ES.3007.14	chr10	-	1607	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-83	3034	-83	-3034	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTTCTTGTTTTC	NA	False	NA	79	True	NA	NA	NA	67384981	67383374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67383400_67385000
ES.3007.2	chr10	-	4638	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-72	-8	-72	8	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGCTTATTGCAAAG	NA	False	NA	NA	False	AATAAA	-25	NA	67384970	67380332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67380300_67385000
ES.3007.3	chr10	-	3182	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	1298	-3	multi-exon	FALSE	non_canonical	1	9	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGTAGAAATAATGTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	67383600	67380343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67382351_67382425
ES.3007.4	chr10	-	4532	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-54	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACGTAGAAATAATG	NA	False	NA	NA	False	AATAAA	-10	NA	67384952	67380347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67382353_67382425
ES.3007.5	chr10	-	4173	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-58	443	-58	-443	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTTTTAGGTAATGT	NA	False	NA	NA	False	ATTAAA	-24	NA	67384956	67380783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67380800_67385000
ES.3007.6	chr10	-	4013	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	-72	617	-72	-617	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGCTGTCTGTCTGTCTG	NA	False	NA	0	True	AATAAA	-23	NA	67384970	67380957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67381000_67385000
ES.3007.7	chr10	-	3917	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-52	-620	multi-exon	FALSE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACGCTGTCTGTCTGT	NA	False	NA	-3	True	AATAAA	-20	NA	67384950	67380960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67382353_67382425
ES.3007.9	chr10	-	3871	2	Genic_Genomic	ENSMUSG00000057134.7	novel	4558	1	NA	NA	-18	-630	multi-exon	TRUE	non_canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCCTGAGTGAGACGCT	NA	False	NA	-13	True	AATAAA	-10	NA	67384916	67380970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67382339_67382413
ES.30070.1	chr7	+	3061	1	Intergenic	novelGene_24883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	14373020	14376081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_14373000_14376100
ES.30071.1	chr7	+	1429	4	NNC	ENSMUSG00000093961.2	novel	1137	3	NA	NA	-2411	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCATGATGTCTCTATAG	NA	False	NA	NA	False	NA	NA	NA	14927494	14931817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_14927542_14929858_14930121_14930246_14930447_14930897
ES.30072.1	chr7	+	1963	4	NNC	ENSMUSG00000094967.2	novel	1137	3	NA	NA	-2438	732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATTTTTATATTGGTTA	NA	False	NA	NA	False	ATTAAA	-10	NA	14938798	14943682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_14938846_14941189_14941452_14941577_14941778_14942228
ES.30073.1	chr7	+	2056	4	NNC	ENSMUSG00000093940.2	novel	1140	3	NA	NA	-2425	824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAATTATAAA	NA	False	NA	NA	False	NA	NA	NA	14950139	14955105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_14950187_14952519_14952782_14952907_14953108_14953558
ES.30073.2	chr7	+	576	4	NNC	ENSMUSG00000093940.2	novel	1140	3	NA	NA	-2425	60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCCAGACTCAGAATC	NA	False	NA	NA	False	NA	NA	NA	14950139	14954341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_14950187_14952519_14952782_14952907_14953001_14954167
ES.30074.1	chr7	+	1914	4	NNC	ENSMUSG00000095922.2	novel	1140	3	NA	NA	-2424	682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAAGGTACAGCTATT	NA	False	NA	NA	False	ATTAAA	-24	NA	14972772	14977595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_14972820_14975151_14975414_14975539_14975740_14976190
ES.30075.1	chr7	-	156	1	Intergenic	novelGene_24884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	15050958	15050802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_15050800_15051000
ES.30076.1	chr7	-	175	1	Intergenic	novelGene_24885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCCAACCCAAT	NA	False	NA	NA	False	NA	NA	NA	15366434	15366259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_15366300_15366400
ES.30077.1	chr7	+	194	1	Intergenic	novelGene_24886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGCCAGGCACACCTT	NA	False	NA	NA	False	NA	NA	NA	15517447	15517641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15517400_15517600
ES.30078.1	chr7	-	155	1	Intergenic	novelGene_24887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	15518825	15518670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_15518700_15518800
ES.30079.1	chr7	+	175	1	Intergenic	novelGene_24888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAACTCATACTTC	NA	False	NA	NA	False	NA	NA	NA	15561440	15561615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15561400_15561600
ES.3008.1	chr10	+	174	1	Intergenic	novelGene_2346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67464161	67464335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67464200_67464300
ES.30080.1	chr7	+	248	1	Intergenic	novelGene_24889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCAGTGATGTCACCTA	NA	False	NA	NA	False	AAGAAA	-43	NA	15572576	15572824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15572600_15572800
ES.30081.1	chr7	-	1379	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	-44	9	-44	-9	multi-exon	FALSE	canonical	3	46	junction_1	9.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTTTTTGCCAGTT	NA	False	NA	11	True	AATAAA	-27	NA	15573647	15567174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15567876_15568304_15568891_15573555
ES.30081.2	chr7	-	1389	3	NNC	ENSMUSG00000041583.9	novel	1344	3	NA	NA	443	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAAAAAATGTTTTTG	NA	False	NA	5	True	AATAAA	-21	NA	15573160	15567180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15567876_15568304_15568891_15573052
ES.30082.1	chr7	-	209	1	Intergenic	novelGene_24890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15595045	15594836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_15594800_15595000
ES.30083.1	chr7	+	180	1	Intergenic	novelGene_24891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	15622494	15622674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15622500_15622700
ES.30084.1	chr7	+	179	1	Intergenic	novelGene_24892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGAAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	15625594	15625773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15625600_15625800
ES.30085.1	chr7	+	2240	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-76	-74	-29	74	multi-exon	FALSE	canonical	3	257	junction_2	3	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAATCTCTTTCTCTTT	NA	False	NA	NA	False	AATGAA	-15	NA	15630019	15634297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369
ES.30085.10	chr7	+	641	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	-60	-10	-60	10	multi-exon	FALSE	canonical	3	864	junction_1	106.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAATTGGGTCTTAT	NA	False	NA	-1	True	AATAAA	-34	NA	15635510	15637955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15635663_15636774_15636933_15637624
ES.30085.11	chr7	+	594	3	NNC	ENSMUSG00000074365.14	novel	571	3	NA	NA	19	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	538.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAATTGGGTCTTAT	NA	False	NA	-1	True	AATAAA	-34	NA	15635589	15637955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15635695_15636774_15636933_15637624
ES.30085.2	chr7	+	962	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	-18	-10	-18	10	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAATTGGGTCTTAT	NA	False	NA	-1	True	AATAAA	-34	NA	15630030	15637955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
ES.30085.3	chr7	+	953	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-55	1192	-8	489	multi-exon	FALSE	canonical	3	257	junction_2	3	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTGGTTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	15630040	15633031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369
ES.30085.4	chr7	+	1100	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	-47	1037	0	644	multi-exon	FALSE	canonical	3	257	junction_2	3	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACTTTGTGTGGA	NA	False	NA	NA	False	AAAAAG	-17	NA	15630048	15633186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369
ES.30085.6	chr7	+	5826	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	5	-3741	5	19	multi-exon	FALSE	canonical	3	257	junction_2	3	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTCTTATTCCATAGCC	NA	False	NA	8	True	AATAAA	-43	NA	15630100	15637964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369
ES.30085.7	chr7	+	6002	3	NIC	ENSMUSG00000074365.14	novel	934	5	NA	NA	6	-4	intron_retention	FALSE	canonical	3	263	junction_1	407	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGACTGCTTTAAAAGA	NA	False	NA	15	True	AATAAA	-20	NA	15630101	15637941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15630183_15631328_15636933_15637624
ES.30085.8	chr7	+	5098	4	NIC	ENSMUSG00000074365.14	novel	934	5	NA	NA	22	0	intron_retention	FALSE	canonical	3	257	junction_2	385.14528283349	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	-11	True	AATAAA	-24	NA	15630117	15637945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15630183_15631328_15631478_15632369_15636933_15637624
ES.30085.9	chr7	+	1348	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	84	-498	37	498	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGGCTTGTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	15630132	15638443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
ES.30086.1	chr7	+	1665	1	Intergenic	novelGene_24893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCATGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	15645320	15646985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15645300_15647000
ES.30086.2	chr7	+	165	1	Intergenic	novelGene_24894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAACAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	15645592	15645757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15645600_15645800
ES.30087.1	chr7	+	208	1	Intergenic	novelGene_24895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAAATTTAGAATGTAGA	NA	False	NA	NA	False	AAAACA	-7	NA	15647804	15648012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15647800_15648000
ES.30088.1	chr7	-	739	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	1	-4	1	4	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTATTTTGGCTTGCA	NA	False	NA	-7	True	AATAAA	-25	NA	15656326	15651128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
ES.30088.3	chr7	-	4765	4	NIC	ENSMUSG00000041571.11	novel	736	6	NA	NA	50	-7	intron_retention	FALSE	canonical	3	2047	junction_2	14.522013940528	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGGAGATGTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	15656277	15651139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15653872_15653967_15654043_15654229_15654284_15654373
ES.30088.4	chr7	-	2443	5	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	64	7	64	-7	intron_retention	FALSE	canonical	3	1985	junction_1	35.9052572752236	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGGAGATGTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	15656263	15651139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373
ES.30088.5	chr7	-	662	5	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	58	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	883.163206887606	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGGAGATGTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	15656269	15651139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654300_15656176
ES.30088.6	chr7	-	656	5	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	58	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	883.163206887606	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGGAGATGTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	15656269	15651139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15656166
ES.30089.1	chr7	-	3203	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	-2	-25	-2	25	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGTCTGCATGTATG	NA	False	NA	NA	False	NA	NA	NA	15680001	15670082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.10	chr7	-	1560	13	NNC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	714.323631136476	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679742	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676284_15676713_15676823_15679214_15679280_15679442
ES.30089.11	chr7	-	1320	13	NNC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	553.467830039731	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679997	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679953
ES.30089.13	chr7	-	1357	12	NNC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	577.980096314343	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676782_15679801
ES.30089.14	chr7	-	1704	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_7	827.801539554553	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679990	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675438_15675573_15675664_15675736_15676099_15676284_15676713_15676823_15679214_15679280_15679754
ES.30089.16	chr7	-	2386	10	NIC	ENSMUSG00000041560.13	novel	1793	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1683	junction_8	109.09164795859	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679987	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15672156_15672276_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.18	chr7	-	2255	10	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1334	junction_1	222.688843428795	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672903_15673013_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.19	chr7	-	2059	11	NIC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1334	junction_1	214.559921700209	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679988	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214
ES.30089.2	chr7	-	3250	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	11	intron_retention	FALSE	canonical	3	1334	junction_1	204.584198350889	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTATCGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	15679988	15670096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.20	chr7	-	1840	12	FSM	ENSMUSG00000041560.13	ENSMUST00000197477.5	1793	12	-47	0	4	0	multi-exon	FALSE	canonical	3	13	junction_11	561.705652160828	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679722	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
ES.30089.21	chr7	-	1625	12	NIC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	13	junction_11	572.725266951755	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679717	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
ES.30089.23	chr7	-	1530	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	713.459354133086	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15680000	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676075_15676284_15676713_15676823_15679214_15679280_15679754
ES.30089.24	chr7	-	1440	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	548.024938605291	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679967	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672141_15672310_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.25	chr7	-	1523	13	NNC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	554.865123751309	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACGCTGGGGTCTTGTTA	NA	False	NA	-10	True	AATAAA	-11	NA	15680008	15671763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679220_15679280_15679754
ES.30089.3	chr7	-	2382	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-8	588	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGAGCCATCATGTA	NA	False	NA	NA	False	ATTAAA	-45	NA	15679988	15671174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.4	chr7	-	1824	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-12	7	intron_retention	FALSE	canonical	3	1683	junction_10	114.507858187885	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTCTTGTTATTTTCTTC	NA	False	NA	-2	True	AATAAA	-19	NA	15680011	15671755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.5	chr7	-	1570	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	-43	1649	-43	6	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCTTGTTATTTTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	15680042	15671756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ES.30089.6	chr7	-	3453	11	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1334	junction_1	205.932051900621	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15680011	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15675736_15676099_15676823_15679214_15679280_15679754
ES.30089.7	chr7	-	2030	10	NIC	ENSMUSG00000041560.13	novel	1793	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_9	607.84996524382	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679727	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15672156_15672276_15672354_15672835_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
ES.30089.8	chr7	-	1574	13	NIC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	550.108846552712	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679740	15671762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
ES.3009.1	chr10	+	1058	1	Intergenic	novelGene_2347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67483228	67484286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67483200_67484300
ES.30090.1	chr7	+	2055	2	Intergenic	novelGene_24896	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15706528	15708636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15707945_15707997
ES.30091.1	chr7	+	3108	9	Intergenic	novelGene_24897	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGGTTTTGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	15713415	15782111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15713544_15713618_15713914_15720839_15721014_15721402_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733422_15781821
ES.30091.2	chr7	+	3006	7	Intergenic	novelGene_24898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGGTTTTGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	15713415	15782111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15713914_15721405_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733422_15781821
ES.30091.4	chr7	+	3176	2	Antisense	novelGene_ENSMUSG00000070808.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGATATGGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	15747166	15750396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_15748268_15748321
ES.30091.5	chr7	+	6741	1	Intergenic	novelGene_24900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGAGCAGCGGCAG	NA	False	NA	NA	False	NA	NA	NA	15774850	15781591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15774800_15781600
ES.30092.1	chr7	-	6040	14	NIC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	-242	0	combination_of_known_splicesites	TRUE	canonical	2	10	junction_3	4.77419096897935	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGGCCCCCTCTGGCCC	NA	False	NA	NA	False	ATTAAA	-27	NA	15782088	15704596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15706815_15709007_15709111_15709290_15709386_15709589_15709739_15710975_15711038_15712613_15712724_15712939_15713121_15713275_15713912_15721403_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
ES.30092.2	chr7	-	5980	15	NNC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.36407440461696	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCAGGCCCCCTCTGGCC	NA	False	NA	NA	False	ATTAAA	-26	NA	15781854	15704597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15706815_15709007_15709109_15709290_15709386_15709589_15709739_15710975_15711038_15712613_15712724_15712939_15713121_15713275_15713912_15720837_15721015_15721403_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
ES.30092.3	chr7	-	4143	6	NIC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	-8	-13012	intron_retention	FALSE	canonical	3	13	junction_2	5.19230199429887	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTCTATCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	15781854	15719512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
ES.30092.4	chr7	-	3572	6	NIC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	-3	-13578	intron_retention	FALSE	canonical	3	13	junction_2	5.19230199429887	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAACTGAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	15781849	15720078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
ES.30092.5	chr7	-	1345	1	Intergenic	novelGene_24899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	15773569	15772224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_15772200_15773600
ES.30093.1	chr7	+	662	1	Intergenic	novelGene_24901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTGATCTGTTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	15782323	15782985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15782300_15783000
ES.30094.1	chr7	+	3335	11	NIC	ENSMUSG00000078796.5	novel	4084	14	NA	NA	6367	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.66332495807108	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCCAACTTCCAAGCC	NA	False	NA	NA	False	ATTAAA	-18	NA	15812233	15830255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15813752_15815602_15815662_15817178_15817498_15823721_15823786_15824284_15824428_15824732_15824837_15826210_15826287_15826763_15826853_15829066_15829208_15829344_15829527_15829615
ES.30095.1	chr7	+	1803	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	-130	844	-130	392	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGCTGTCCCTTTGAC	NA	False	NA	33	True	AATAAA	-23	NA	15832252	15851056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.10	chr7	+	2074	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	388	intron_retention	FALSE	canonical	3	1130	junction_6	73.0358430840639	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.11	chr7	+	2153	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	388	intron_retention	FALSE	canonical	3	1130	junction_6	71.7459711412425	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.12	chr7	+	2106	8	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	388	intron_retention	TRUE	canonical	3	18	junction_3	427.96323511751	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15847036_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.13	chr7	+	4108	4	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	388	intron_retention	FALSE	canonical	0	0	junction_3	577.479773575568	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15832662_15841477_15841558_15842975_15843093_15847274
ES.30095.14	chr7	+	2928	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	6	intron_retention	FALSE	canonical	3	1130	junction_6	73.0358430840639	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTCATTCATTCTGGA	NA	False	NA	8	True	AATAAA	-23	NA	15832528	15851906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.15	chr7	+	4789	6	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	2	intron_retention	FALSE	canonical	3	1140	junction_5	70.7180316468155	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCACATCTCATTCATTC	NA	False	NA	4	True	AATAAA	-19	NA	15832528	15851902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15849576_15850388
ES.30095.18	chr7	+	2392	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	18	junction_3	407.327570881226	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCACATCTCATTCAT	NA	False	NA	2	True	AATAAA	-17	NA	15832530	15851900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15847036_15847115_15847274_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.19	chr7	+	3905	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1140	junction_8	61.285703879453	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGCACATCTCATTCA	NA	False	NA	1	True	AATAAA	-16	NA	15832530	15851899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15849197_15849524_15849576_15850388
ES.30095.2	chr7	+	2832	8	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-55	385	intron_retention	FALSE	canonical	3	1130	junction_5	76.2455753149128	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCCTCTTGAGCTGTCC	NA	False	NA	26	True	AATAAA	-16	NA	15832327	15851049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.20	chr7	+	2884	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-2	2	intron_retention	FALSE	canonical	3	18	junction_3	403.911016654659	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCACATCTCATTCATTC	NA	False	NA	4	True	AATAAA	-19	NA	15832530	15851902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15847036_15847115_15847274_15847331_15847400_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.21	chr7	+	1513	11	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-2	388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.935964824119	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832530	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15832700_15841485_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.23	chr7	+	1664	10	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	386	intron_retention	FALSE	canonical	0	0	junction_6	393.470315130492	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTTGAGCTGTCCC	NA	False	NA	27	True	AATAAA	-17	NA	15832532	15851050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847486_15847968_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.24	chr7	+	1468	10	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	4	388	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	386.334180167161	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832536	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.26	chr7	+	3096	6	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-7	383	intron_retention	FALSE	canonical	3	1130	junction_4	82.8806370631886	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGCCTCTTGAGCTGT	NA	False	NA	24	True	AATAAA	-14	NA	15832549	15851047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15848151_15849127_15849576_15850388
ES.30095.27	chr7	+	3583	7	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	388	intron_retention	FALSE	canonical	3	1140	junction_6	69.4344214989143	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832556	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15849197_15849524_15849576_15850388
ES.30095.28	chr7	+	3689	7	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	2	382	intron_retention	FALSE	canonical	3	1130	junction_4	77.8666952054742	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGAGCCTCTTGAGCTG	NA	False	NA	23	True	AATAAA	-13	NA	15832564	15851046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15843093_15846508_15846556_15847036_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.29	chr7	+	1473	11	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	10	387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	500.401199039331	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTTGAGCTGTCCCT	NA	False	NA	28	True	AATAAA	-18	NA	15832572	15851051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849527_15849580_15850394
ES.30095.3	chr7	+	2568	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	-44	-7	-44	7	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCATTCATTCTGGAT	NA	False	NA	9	True	AATAAA	-24	NA	15832338	15851907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.30	chr7	+	2196	10	ISM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	9094	5	-64	-5	3prime_fragment	FALSE	canonical	3	1130	junction_7	57.0473054729879	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAACCTGCACATCTCA	NA	False	NA	-3	True	AATAAA	-12	NA	15841476	15851895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.31	chr7	+	2952	7	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	792	384	intron_retention	FALSE	canonical	3	1130	junction_4	63.13741627065	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCTCTTGAGCTGTC	NA	False	NA	25	True	AATAAA	-15	NA	15842332	15851048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15843093_15846508_15847115_15847274_15847331_15847400_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.32	chr7	+	5483	4	FSM	ENSMUSG00000006024.14	ENSMUST00000150208.8	798	4	-4120	-565	1908	385	multi-exon	FALSE	canonical	3	1130	junction_1	26.2466929133727	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCCTCTTGAGCTGTCC	NA	False	NA	26	True	AATAAA	-16	NA	15843448	15851049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.33	chr7	+	4195	7	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	2409	388	intron_retention	FALSE	canonical	3	1130	junction_4	63.3203934149356	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15843949	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.34	chr7	+	2513	5	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-1310	385	intron_retention	FALSE	canonical	3	1130	junction_2	66.6389525728008	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCCTCTTGAGCTGTCC	NA	False	NA	26	True	AATAAA	-16	NA	15846258	15851049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.4	chr7	+	1738	10	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	1	388	intron_retention	FALSE	canonical	3	1130	junction_7	69.0812725868757	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832383	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.5	chr7	+	3039	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-42	0	intron_retention	FALSE	canonical	3	1130	junction_6	71.7459711412425	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCACATCTCATTCAT	NA	False	NA	2	True	AATAAA	-17	NA	15832490	15851900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.6	chr7	+	3539	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-42	388	intron_retention	FALSE	canonical	3	1130	junction_6	72.0623644838275	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832490	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15848151_15849127_15849197_15849524_15849576_15850388
ES.30095.7	chr7	+	1433	10	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-19	388	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	395.120547318891	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832513	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15849127_15849197_15849524_15849576_15850388
ES.30095.8	chr7	+	1496	10	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	-4	388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	391.905159855019	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTGAGCTGTCCCTT	NA	False	NA	29	True	AATAAA	-19	NA	15832528	15851052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15847016_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ES.30096.1	chr7	+	1654	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-26	2	-26	-2	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	False	NA	30	True	NA	NA	NA	15853793	15861439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ES.30096.2	chr7	+	3915	9	NIC	ENSMUSG00000006021.6	novel	1630	12	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	80	junction_5	5.07444578254611	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	False	NA	30	True	NA	NA	NA	15853804	15861439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15857199_15857696_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ES.30096.3	chr7	+	2219	10	NIC	ENSMUSG00000006021.6	novel	1630	12	NA	NA	-15	-13	intron_retention	FALSE	canonical	3	80	junction_6	4.8635708062754	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTTAATTTCCTT	NA	False	NA	19	True	NA	NA	NA	15853804	15861428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ES.30096.4	chr7	+	1724	11	NIC	ENSMUSG00000006021.6	novel	1630	12	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	80	junction_7	4.94064773081425	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	False	NA	30	True	NA	NA	NA	15853812	15861439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ES.30096.5	chr7	+	1409	4	ISM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	-7	5700	-7	292	5prime_fragment	FALSE	canonical	3	83	junction_1	1.88561808316413	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTCATTTGCGAGTCT	NA	False	NA	NA	False	AAAAAG	-7	NA	15853812	15855741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794
ES.30096.6	chr7	+	1604	11	ISM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	332	2	8	-2	3prime_fragment	FALSE	canonical	3	76	junction_4	5.8309518948453	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	False	NA	30	True	NA	NA	NA	15854151	15861439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ES.30097.1	chr7	+	2012	13	NIC	ENSMUSG00000041420.19	novel	1925	12	NA	NA	5	0	intron_retention	FALSE	canonical	1	3	junction_1	5.28099317258495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7359	False	NA	NA	False	AATAAA	-14	NA	15909019	15920426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15909110_15909319_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919447_15919981
ES.30097.2	chr7	+	1901	13	FSM	ENSMUSG00000041420.19	ENSMUST00000176506.8	1839	13	-65	3	-65	0	multi-exon	FALSE	canonical	1	1	junction_5	5.65439848456246	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7474	False	NA	NA	False	AATAAA	-14	NA	15909134	15920426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912926_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919447_15919981
ES.30097.3	chr7	+	2023	12	FSM	ENSMUSG00000041420.19	ENSMUST00000175946.8	1925	12	-98	0	15	0	multi-exon	FALSE	canonical	3	10	junction_3	3.73723723474445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7554	False	NA	NA	False	AATAAA	-14	NA	15909214	15920426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ES.30097.4	chr7	+	1826	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	-98	3	-56	0	multi-exon	FALSE	canonical	3	8	junction_5	4.17997873466148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	7596	False	NA	NA	False	AATAAA	-14	NA	15909256	15920426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ES.30097.6	chr7	+	1517	1	NIC	ENSMUSG00000041420.19	novel	1839	13	NA	NA	895	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAATTCTCATTTGT	1544	False	NA	NA	False	AATAAA	-14	NA	15918909	15920426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_15918900_15920400
ES.30098.1	chr7	-	4086	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-36	-249	-31	175	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCTTTTGTCTCTTTG	8406	False	NA	NA	False	NA	NA	NA	15955993	15930896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.11	chr7	-	3992	16	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	0	-7	intron_retention	FALSE	canonical	3	51	junction_15	13.7737270030865	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAATTAATTAATTGTT	8437	False	NA	-11	True	AAGAAA	-35	NA	15955962	15931078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.17	chr7	-	4429	18	NNC	ENSMUSG00000006019.16	novel	4073	17	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	27.9568377161385	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCCTCCCTCACCC	8501	False	NA	-2	True	AATAAA	-18	NA	15955898	15931146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15954590_15954710_15955353
ES.30098.19	chr7	-	4192	17	NNC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	-36	1	intron_retention	FALSE	canonical	0	0	junction_5	29.0471061381336	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGTGCCTCCCTCACC	8401	False	NA	-3	True	AATAAA	-17	NA	15955998	15931147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15936132_15936366_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.2	chr7	-	3931	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-31	-99	-26	25	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAATGTTGTCTCCCT	8411	False	NA	21	True	NA	NA	NA	15955988	15931046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.20	chr7	-	3734	16	NNC	ENSMUSG00000006019.16	novel	4073	17	NA	NA	3041	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	22.7678135387071	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGCCTCCCTCAC	6948	False	NA	-4	True	AATAAA	-16	NA	15952877	15931148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940076_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
ES.30098.21	chr7	-	3808	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	-10	3	-5	0	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGCCTCCCTCAC	8432	False	NA	-4	True	AATAAA	-16	NA	15955967	15931148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.22	chr7	-	3486	14	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	-26	-2	intron_retention	FALSE	canonical	0	0	junction_3	29.8524973433235	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACCTGTGCCTCCCTC	8411	False	NA	-6	True	AATAAA	-14	NA	15955988	15931150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.23	chr7	-	3677	16	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	23.864059447909	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGACCTGTGCCTCCCTC	8443	False	NA	-6	True	AATAAA	-14	NA	15955956	15931150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.24	chr7	-	3545	6	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3041	11773	3041	-3008	internal_fragment	FALSE	canonical	3	60	junction_2	7.61577310586391	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACTGTTATGAGTCAT	6948	False	NA	NA	False	NA	NA	NA	15952877	15942921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
ES.30098.3	chr7	-	4884	15	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	-24	20	intron_retention	FALSE	canonical	2	6	junction_9	23.5273397196902	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATTTCAAATGTTGTC	8413	False	NA	16	True	NA	NA	NA	15955986	15931051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.4	chr7	-	4163	17	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	-45	4	combination_of_known_splicesites	FALSE	canonical	3	6	junction_16	21.4490675788016	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTTTATTTATTTA	8392	False	NA	0	True	NA	NA	NA	15956007	15931067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15953110_15955922
ES.30098.6	chr7	-	3832	15	NNC	ENSMUSG00000006019.16	novel	3880	17	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_1	29.7626666569145	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAATTGTTTTATTTA	8428	False	NA	-4	True	AAGAAA	-42	NA	15955971	15931071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_15931356_15932491_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30098.8	chr7	-	2940	13	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	3663	-6	intron_retention	FALSE	canonical	0	0	junction_9	25.506398979254	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTAATTAATTGTTT	7570	False	NA	-10	True	AAGAAA	-36	NA	15952255	15931077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15948266_15948370_15949148_15949404_15950143_15950456_15951912
ES.30098.9	chr7	-	3699	16	NIC	ENSMUSG00000006019.16	novel	3801	17	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	22.9098717198989	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATTAATTAATTGTTT	8437	False	NA	-10	True	AAGAAA	-36	NA	15955962	15931077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ES.30099.1	chr7	+	179	1	Intergenic	novelGene_24902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	15983342	15983521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15983300_15983500
ES.301.1	chr1	+	5884	1	Antisense	novelGene_ENSMUSG00000102930.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9646	False	NA	NA	False	NA	NA	NA	36949649	36955533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_36949600_36955500
ES.3010.1	chr10	+	190	1	Intergenic	novelGene_2348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAATGTTGGTATGGAG	1872	False	NA	NA	False	NA	NA	NA	67550102	67550292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67550100_67550300
ES.30100.1	chr7	+	184	1	Intergenic	novelGene_24903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	15990094	15990278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15990100_15990300
ES.30101.1	chr7	+	172	1	Intergenic	novelGene_24904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15991281	15991453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15991300_15991500
ES.30102.1	chr7	+	151	1	Intergenic	novelGene_24905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	15999249	15999400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_15999200_15999400
ES.30103.1	chr7	-	5802	13	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	1	5	intron_retention	FALSE	canonical	3	9	junction_12	83.7570477963231	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTGGTTTCTGCTCTGTC	NA	False	NA	-2	True	ATTAAA	-24	NA	16019949	16005932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16019851
ES.30103.10	chr7	-	3055	15	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	-2	-717	multi-exon	FALSE	canonical	0	0	junction_1	80.6757177133952	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACCTGGTCTGTGGTCGT	NA	False	NA	NA	False	AATAAA	-17	NA	16020717	16006654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16007855_16008291_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.11	chr7	-	2993	15	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	21	-718	multi-exon	FALSE	canonical	0	0	junction_1	82.5585753713504	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTACCTGGTCTGTGGTCG	NA	False	NA	NA	False	AATAAA	-16	NA	16020677	16006655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16007855_16008291_16008342_16009204_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.12	chr7	-	5516	9	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	10	0	intron_retention	FALSE	canonical	3	30	junction_1	75.2727332770639	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAACTGTGCTGCTAG	NA	False	NA	-5	True	ATTAAA	-17	NA	16020688	16007966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16012464_16014522_16014697_16014782_16014867_16016281_16018472_16020624
ES.30103.13	chr7	-	2188	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	84.4692444291878	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGAACTGTGCTGCTA	NA	False	NA	-6	True	ATTAAA	-16	NA	16020677	16007967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16008342_16009180_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018149_16018301_16018419_16018472_16020624
ES.30103.14	chr7	-	2170	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	68.79796336603	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAACTGTGCTGCT	NA	False	NA	-7	True	ATTAAA	-15	NA	16020706	16007968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16008342_16009180_16009301_16009662_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.15	chr7	-	3539	13	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	35	1	intron_retention	FALSE	canonical	3	30	junction_1	68.3152415074573	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAACTGTGCTGCT	NA	False	NA	-7	True	ATTAAA	-15	NA	16020663	16007968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.16	chr7	-	1885	8	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-192	1	intron_retention	FALSE	canonical	1	11	junction_6	93.8631222274526	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGAACTGTGCTGCT	3430	False	NA	-7	True	ATTAAA	-15	NA	16014814	16007968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16008342_16009180_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012456_16014522_16014697_16014782
ES.30103.19	chr7	-	2115	14	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	66.5924636352925	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTGAACTGTGCTGC	NA	False	NA	-8	True	ATTAAA	-14	NA	16020679	16007969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16008342_16009204_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.2	chr7	-	4171	14	FSM	ENSMUSG00000041375.20_ENSMUSG00000091811.3	ENSMUST00000118976.10	2175	14	36	-2032	19	0	multi-exon	FALSE	canonical	3	30	junction_1	66.2157134678708	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16020679	16005937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.20	chr7	-	3419	10	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	25	0	intron_retention	FALSE	canonical	3	100	junction_1	41.222371967383	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTGTGTCCTTGAACC	NA	False	NA	-1	True	AATAAA	-27	NA	16020673	16009388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.21	chr7	-	1971	12	ISM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	-15	1420	-10	-1	5prime_fragment	FALSE	canonical	3	130	junction_1	29.1238449918179	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACTGTGTCCTTGAAC	NA	False	NA	-2	True	AATAAA	-26	NA	16020730	16009389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.22	chr7	-	1789	12	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	71.9081140032481	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACTGTGTCCTTGAAC	NA	False	NA	-2	True	AATAAA	-26	NA	16020707	16009389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016443_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.23	chr7	-	2007	12	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	100.557783232304	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACTGTGTCCTTGAAC	NA	False	NA	-2	True	AATAAA	-26	NA	16019937	16009389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16018195_16018301_16018419_16018472_16019229_16019382_16019851
ES.30103.24	chr7	-	3661	10	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	4	-4	intron_retention	FALSE	canonical	3	130	junction_1	31.9772295528638	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCCACTGTGTCCTTG	NA	False	NA	-5	True	AATAAA	-23	NA	16020694	16009392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014697_16014782_16014867_16016281_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.26	chr7	-	1896	12	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	132	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	71.9423552529304	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020566	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020534
ES.30103.27	chr7	-	1942	12	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	70.9277364763101	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020678	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014891_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.28	chr7	-	3800	9	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	-5	intron_retention	FALSE	canonical	1	1	junction_6	82.0463855084427	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020699	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014867_16016281_16016776_16018149_16018301_16018419_16018472_16020624
ES.30103.3	chr7	-	3570	15	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	21	0	multi-exon	FALSE	non_canonical	0	0	junction_1	91.5531517307664	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16020677	16005937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16007855_16008291_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016443_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.31	chr7	-	2074	13	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	84.4532661693239	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020685	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16019229_16019382_16020624
ES.30103.32	chr7	-	2013	13	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	84.4085632833278	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020694	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16015079_16015162_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.33	chr7	-	1949	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	35	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	71.8470597867442	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020663	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018149_16018301_16018419_16018472_16020624
ES.30103.34	chr7	-	3333	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	20	-5	intron_retention	FALSE	canonical	3	100	junction_1	39.1453700966027	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCCCACTGTGTCCTT	NA	False	NA	-6	True	AATAAA	-22	NA	16020678	16009393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.35	chr7	-	4912	10	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	19	6	intron_retention	FALSE	canonical	3	130	junction_1	32.1551025077506	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCACCCCACTGTGTCC	NA	False	NA	-8	True	AATAAA	-20	NA	16020679	16009395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.36	chr7	-	2067	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	10	4	intron_retention	FALSE	canonical	3	130	junction_1	30.3374356200388	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCACCCCACTGTGT	NA	False	NA	-10	True	AATAAA	-18	NA	16020688	16009397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.37	chr7	-	3479	10	NNC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	-3	1	intron_retention	FALSE	canonical	1	3	junction_2	72.8058470043766	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACACCCACCCCACTG	NA	False	NA	-13	True	AATAAA	-15	NA	16020708	16009400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16010033_16010126_16010221_16010438_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.38	chr7	-	3511	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	130	junction_1	30.545212390815	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACACCCACCCCACTG	NA	False	NA	-13	True	AATAAA	-15	NA	16020698	16009400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.39	chr7	-	2108	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	21	1	intron_retention	FALSE	canonical	3	100	junction_1	38.4442453430939	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACACCCACCCCACTG	NA	False	NA	-13	True	AATAAA	-15	NA	16020677	16009400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.4	chr7	-	5947	12	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	20	0	intron_retention	FALSE	canonical	3	30	junction_1	61.0719667602652	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16020678	16005937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16008342_16009180_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.41	chr7	-	3725	9	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	21	1	intron_retention	FALSE	canonical	3	100	junction_1	43.4827552024938	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACACCCACCCCACTG	NA	False	NA	-13	True	AATAAA	-15	NA	16020677	16009400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014867_16016281_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.42	chr7	-	1937	12	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	66.4748756366576	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACACCCACCCCACT	NA	False	NA	-14	True	AATAAA	-14	NA	16019935	16009401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16019851
ES.30103.43	chr7	-	1816	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	71.6103344497147	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGACACCCACCCCAC	NA	False	NA	-15	True	AATAAA	-13	NA	16020687	16009402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16018195_16018301_16018419_16018472_16020624
ES.30103.5	chr7	-	3705	15	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	21	-3	multi-exon	FALSE	canonical	0	0	junction_1	80.9390044970878	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACAGCGTTGGTTTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	16020677	16005940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16007855_16008291_16008342_16009204_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.7	chr7	-	5323	14	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_1	82.9652383184112	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACAGCGTTGGTTTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	16020688	16005940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16007855_16008291_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ES.30103.8	chr7	-	3458	4	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	48	-4	intron_retention	FALSE	canonical	1	3	junction_3	54.9322815433289	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAACAGCGTTGGTTTC	7670	False	NA	-11	True	ATTAAA	-15	NA	16010574	16005941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16008342_16009204_16010033_16010126_16010221_16010438
ES.30103.9	chr7	-	3449	8	Fusion	ENSMUSG00000041375.20_ENSMUSG00000091811.3	novel	2175	14	NA	NA	-29	-9	multi-exon	FALSE	canonical	3	28	junction_1	80.4378325041096	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGAGAACAGCGTTG	3593	False	NA	-16	True	ATTAAA	-10	NA	16014651	16005946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_16008342_16009204_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522
ES.30104.1	chr7	-	166	1	Intergenic	novelGene_24906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	16024166	16024000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16024000_16024200
ES.30105.1	chr7	+	177	1	Intergenic	novelGene_24907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	16024463	16024640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16024500_16024600
ES.30106.1	chr7	-	158	1	Intergenic	novelGene_24908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	9754	False	NA	NA	False	NA	NA	NA	16037886	16037728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16037700_16037900
ES.30107.1	chr7	+	1745	4	NIC	ENSMUSG00000002083.14	novel	405	2	NA	NA	-63	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	104.103580896891	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16042254	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16042434_16046050_16046340_16047551_16047743_16051042
ES.30107.2	chr7	+	1645	4	NNC	ENSMUSG00000002083.14	novel	881	2	NA	NA	-59	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.103580896891	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTCTTTTTGTTAGCT	NA	False	NA	23	True	AATAAA	-16	NA	16042258	16052127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16042339_16046050_16046340_16047551_16047743_16051042
ES.30107.3	chr7	+	1866	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	-53	1	-53	-1	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTTTTGTTAGCTTT	NA	False	NA	25	True	AATAAA	-18	NA	16043487	16052129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ES.30107.4	chr7	+	1748	4	NNC	ENSMUSG00000002083.14	novel	1814	4	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	95.7160151466595	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16043507	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16043690_16046050_16046340_16047551_16047743_16051042
ES.30107.5	chr7	+	1650	4	NNC	ENSMUSG00000002083.14	novel	881	2	NA	NA	391	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.103580896891	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16043931	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16044016_16046050_16046340_16047551_16047743_16051042
ES.30107.6	chr7	+	1924	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-274	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16044105	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
ES.30107.7	chr7	+	1675	4	NNC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.103580896891	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16044347	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16044464_16046057_16046340_16047551_16047743_16051042
ES.30107.8	chr7	+	1594	4	NNC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	103.170839980211	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTTTTGTTAGCTT	NA	False	NA	24	True	AATAAA	-17	NA	16044357	16052128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16044386_16046050_16046340_16047551_16047743_16051042
ES.30108.1	chr7	-	6071	2	Antisense	novelGene_ENSMUSG00000002083.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACAAAATCCCAGCAGT	5159	False	NA	NA	False	NA	NA	NA	16047658	16041305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_16045175_16045456
ES.30109.1	chr7	+	5277	2	Antisense	novelGene_ENSMUSG00000052833.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3568	False	NA	NA	False	NA	NA	NA	16066309	16071626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_16070978_16071017
ES.30109.2	chr7	+	5346	1	Antisense	novelGene_ENSMUSG00000052833.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACCAAACAAAAATCTTT	3568	False	NA	NA	False	NA	NA	NA	16066309	16071655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_16066300_16071700
ES.3011.1	chr10	+	175	1	Intergenic	novelGene_2349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCAGAGCAAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	67607246	67607421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67607200_67607400
ES.30110.1	chr7	+	180	1	Intergenic	novelGene_24910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	16081936	16082116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16081900_16082100
ES.30111.1	chr7	+	158	1	Intergenic	novelGene_24912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	16093439	16093597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16093400_16093600
ES.30112.1	chr7	+	277	1	Intergenic	novelGene_24913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	6765	False	NA	NA	False	NA	NA	NA	16105398	16105675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16105400_16105700
ES.30113.1	chr7	+	176	1	Intergenic	novelGene_24914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCTGAGAGAGCAGGGCC	7991	False	NA	NA	False	NA	NA	NA	16106624	16106800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16106600_16106800
ES.30114.1	chr7	+	3807	1	Intergenic	novelGene_24915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCACACAGATGACTAGAA	NA	False	NA	NA	False	NA	NA	NA	16112691	16116498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16112700_16116500
ES.30115.1	chr7	+	165	1	Intergenic	novelGene_24916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	476	False	NA	NA	False	NA	NA	NA	16117205	16117370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16117200_16117400
ES.30116.1	chr7	+	410	1	Intergenic	novelGene_24917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTAGAA	2911	False	NA	NA	False	NA	NA	NA	16122798	16123208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16122800_16123200
ES.30117.1	chr7	-	1550	10	FSM	ENSMUSG00000052833.10	ENSMUST00000210999.2	1254	10	-25	-271	-25	-237	multi-exon	FALSE	canonical	3	190	junction_1	915.179615373431	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTTTTAGAGACACAGT	NA	False	NA	-11	True	ATTAAA	-25	NA	16121756	16054395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16054806_16061755_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.10	chr7	-	1777	8	NIC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-29	-3	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	1057.8876141073	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121760	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16061855_16064537_16064608_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.11	chr7	-	1864	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-3447	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1027.58880394835	1287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16125178	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16125041
ES.30117.16	chr7	-	1895	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1024.74983989996	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121702	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061855_16064537_16064608_16070618_16070795_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.17	chr7	-	1763	8	NIC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-44	-3	combination_of_known_splicesites	FALSE	canonical	1	7	junction_6	1074.86568691068	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121775	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16112289_16112402_16121565
ES.30117.18	chr7	-	4578	8	ISM	ENSMUSG00000052833.10	ENSMUST00000211741.2	1663	9	-2	6819	-2	-3	5prime_fragment	FALSE	canonical	3	2941	junction_5	112.011296806371	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121733	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.2	chr7	-	1407	9	FSM	ENSMUSG00000052833.10	ENSMUST00000211741.2	1663	9	1	255	1	253	multi-exon	FALSE	canonical	3	51	junction_1	1013.32101743475	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATTAAAGGAATCAA	NA	False	NA	-29	True	ATTAAA	-7	NA	16121730	16054413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16054806_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.20	chr7	-	2588	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	49451	3	30268	-3	3prime_fragment	FALSE	canonical	3	2967	junction_1	123	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16072259	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16061855_16064537_16064608_16070618
ES.30117.21	chr7	-	1864	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1012.88449489564	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121730	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104391_16112322_16112402_16121565
ES.30117.22	chr7	-	2089	2	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	55961	3	36778	-3	3prime_fragment	FALSE	canonical	3	2967	junction_1	0	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16065749	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16061855_16064537
ES.30117.23	chr7	-	1951	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1030.09875133407	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121702	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061942_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.25	chr7	-	1757	8	NIC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	1081.17957125823	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTTGCTTGTCTCCTCT	NA	False	NA	-8	True	AATAAA	-13	NA	16121702	16060978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16061855_16064537_16064608_16070618_16070764_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.28	chr7	-	1791	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-36	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1027.58880394835	1285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAACTTGCTTGTCTCCTC	NA	False	NA	-9	True	AATAAA	-12	NA	16121767	16060979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121701
ES.30117.3	chr7	-	1254	9	FSM	ENSMUSG00000052833.10	ENSMUST00000211741.2	1663	9	1	408	1	100	multi-exon	FALSE	canonical	3	51	junction_1	1013.32101743475	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGACTGCCCTTGGAC	NA	False	NA	NA	False	AATATA	-13	NA	16121730	16054566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16054806_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.31	chr7	-	1743	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-44	176	-23	-176	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTGGGGCACTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	16121754	16061150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.32	chr7	-	180	1	Intergenic	novelGene_24909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCACTCG	NA	False	NA	NA	False	NA	NA	NA	16079145	16078965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16079000_16079100
ES.30117.33	chr7	-	146	1	Intergenic	novelGene_24911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	16084796	16084650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16084600_16084800
ES.30117.34	chr7	-	1217	8	NNC	ENSMUSG00000052833.10	novel	1663	9	NA	NA	-26	-22031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1393.02319889263	1200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCCGGCCTATTCT	NA	False	NA	NA	False	AATAAA	-9	NA	16121757	16090223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16090524_16090638_16090729_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.35	chr7	-	4150	1	NIC	ENSMUSG00000052833.10	novel	1663	9	NA	NA	1	-49388	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAACAAGGTCTT	NA	False	NA	NA	False	NA	NA	NA	16121730	16117580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16117600_16121700
ES.30117.4	chr7	-	2163	11	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	2	1656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1219.44242996543	1285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTAGTCTTGACTCT	NA	False	NA	NA	False	NA	NA	NA	16121729	16059318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16060295_16060406_16060481_16061755_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.5	chr7	-	4590	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	8	0	intron_retention	FALSE	canonical	2	2	junction_1	1335.77896281533	1285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121702	16060974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16064608_16067500_16067541_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.6	chr7	-	1961	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	-88	2	-67	-2	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTGTCTCCTCTGT	NA	False	NA	-6	True	AATAAA	-15	NA	16121798	16060976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30117.8	chr7	-	2075	9	NNC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1018.26555966506	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	False	NA	-7	True	AATAAA	-14	NA	16121764	16060977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16061855_16064537_16064608_16070469_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ES.30118.1	chr7	+	7136	13	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1311	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	29.3317944672103	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCTAGTCTCATCTC	3170	False	NA	20	True	ATTAAA	-24	NA	16133523	16171623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.11	chr7	+	6509	15	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-593	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.9486681983621	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	3888	False	NA	15	True	ATTAAA	-19	NA	16134241	16171618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16134648_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.12	chr7	+	3913	13	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-91	-2000	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	29.3317944672103	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTCTGGTCAGTGCT	4390	False	NA	NA	False	CATAAA	-15	NA	16134743	16169620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.13	chr7	+	4107	14	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-38	-2002	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.2757699018835	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGTTCTGGTCAGTG	4443	False	NA	NA	False	CATAAA	-13	NA	16134796	16169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.15	chr7	+	7066	13	NIC	ENSMUSG00000059273.10	novel	5853	14	NA	NA	-71	-5	intron_retention	FALSE	canonical	0	0	junction_9	32.4554181403763	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	4707	False	NA	12	True	ATTAAA	-16	NA	16135060	16171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16136442_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.16	chr7	+	7573	1	Genic_Genomic	ENSMUSG00000059273.10	novel	NA	NA	NA	NA	-62	-8256	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCAGA	4716	False	NA	NA	False	NA	NA	NA	16135069	16142642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16135100_16142600
ES.30118.17	chr7	+	5963	14	NNC	ENSMUSG00000059273.10	novel	3244	2	NA	NA	-62	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5646188815483	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	4716	False	NA	15	True	ATTAAA	-19	NA	16135069	16171618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16135096_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.18	chr7	+	6099	14	FSM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	-60	0	-60	0	multi-exon	FALSE	canonical	0	0	junction_9	35.8403758961691	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	4718	False	NA	17	True	ATTAAA	-21	NA	16135071	16171620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.19	chr7	+	5846	13	NIC	ENSMUSG00000059273.10	novel	5853	14	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	31.572997429238	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	4723	False	NA	18	True	ATTAAA	-22	NA	16135076	16171621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.2	chr7	+	6167	15	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1300	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.3896851274296	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTCTAGTCTCATCTC	3181	False	NA	20	True	ATTAAA	-24	NA	16133534	16171623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16133594_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.20	chr7	+	3998	14	NNC	ENSMUSG00000059273.10	novel	3244	2	NA	NA	103	-2002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.9646440452533	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGTTCTGGTCAGTG	4881	False	NA	NA	False	CATAAA	-13	NA	16135234	16169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16135505_16136401_16136442_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.21	chr7	+	2487	1	Antisense	novelGene_ENSMUSG00000110181.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGGCCTGGGAGGAGC	6321	False	NA	NA	False	NA	NA	NA	16136674	16139161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_16136700_16139200
ES.30118.22	chr7	+	5967	14	NNC	ENSMUSG00000059273.10	novel	3244	2	NA	NA	803	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5646188815483	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	NA	False	NA	12	True	ATTAAA	-16	NA	16149572	16171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16149606_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.24	chr7	+	3571	12	NNC	ENSMUSG00000059273.10	novel	6039	14	NA	NA	2022	-2002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.6864491970307	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGGTTCTGGTCAGTG	NA	False	NA	NA	False	CATAAA	-13	NA	16150791	16169618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156188_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.26	chr7	+	4988	8	ISM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	20973	6	7335	-5	3prime_fragment	FALSE	canonical	0	0	junction_4	34.0198021566192	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	NA	False	NA	12	True	ATTAAA	-16	NA	16156104	16171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.28	chr7	+	4556	2	NIC	ENSMUSG00000059273.10	novel	6039	14	NA	NA	14180	-5	intron_retention	FALSE	canonical	3	40	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	2747	False	NA	12	True	ATTAAA	-16	NA	16162949	16171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16163836_16167945
ES.30118.3	chr7	+	5914	14	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1300	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.1132180118543	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGAGTCTAGTCTCA	3181	False	NA	16	True	ATTAAA	-20	NA	16133534	16171619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16133594_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.31	chr7	+	3024	2	NNC	ENSMUSG00000059273.10	novel	6039	14	NA	NA	14943	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	3510	False	NA	12	True	ATTAAA	-16	NA	16163712	16171615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16163751_16168629
ES.30118.32	chr7	+	6022	2	ISM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	29466	3	15828	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGTGAGTCTAGTCT	4395	False	NA	14	True	ATTAAA	-18	NA	16164597	16171617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16166948_16167945
ES.30118.4	chr7	+	7371	14	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1299	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.2757699018835	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	3182	False	NA	18	True	ATTAAA	-22	NA	16133535	16171621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.5	chr7	+	6533	15	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.6088675551904	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	3187	False	NA	18	True	ATTAAA	-22	NA	16133540	16171621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16133968_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.6	chr7	+	5990	14	NNC	ENSMUSG00000059273.10	novel	3244	2	NA	NA	-1294	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	37.4388653547788	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTGAGTCTAGTCTC	3187	False	NA	15	True	ATTAAA	-19	NA	16133540	16171618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16133594_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.7	chr7	+	5380	15	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1248	-2001	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.4537888581999	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGTTCTGGTCAGTGC	3233	False	NA	NA	False	CATAAA	-14	NA	16133586	16169619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16134967_16136379_16136442_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ES.30118.8	chr7	+	6001	14	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1015	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.3961341347757	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGTGAGTCTAGTCT	3466	False	NA	14	True	ATTAAA	-18	NA	16133819	16171617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16133968_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ES.30118.9	chr7	+	6296	14	NNC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-629	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.8318151445696	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	3852	False	NA	17	True	ATTAAA	-21	NA	16134205	16171620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16134648_16134800_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159291_16159636_16159746_16162915_16163275_16163455_16163836_16167945
ES.30119.1	chr7	-	2654	11	Intergenic	novelGene_24918	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAGGGTTTCCAAAGAA	NA	False	NA	NA	False	AAAAAG	-30	NA	16163611	16135762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16136441_16150696_16150918_16151215_16151326_16154080_16154304_16155278_16155431_16156111_16156209_16156300_16156443_16157770_16157883_16159178_16159292_16159635_16159744_16162913
ES.30119.2	chr7	-	5379	1	FSM	ENSMUSG00000110181.2	ENSMUST00000209298.2	299	1	-2954	-2126	-2954	2126	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAGGGTTTCCAAAGAA	NA	False	NA	NA	False	AAAAAG	-30	NA	16141141	16135762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16135800_16141100
ES.30119.3	chr7	-	4017	14	Intergenic	novelGene_24919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	AAAAAG	-11	NA	16168795	16135781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16136684_16150696_16150918_16151215_16151327_16154083_16154304_16155278_16155431_16156111_16156209_16156300_16156443_16157770_16157883_16159178_16159292_16159635_16159743_16162913_16163273_16163453_16163834_16166696_16166946_16167943
ES.30119.4	chr7	-	485	1	FSM	ENSMUSG00000109781.2	ENSMUST00000209624.2	1229	1	768	-24	768	24	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	16141140	16140655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16140700_16141100
ES.30119.5	chr7	-	3089	4	Antisense	novelGene_ENSMUSG00000059273.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	16163575	16156791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_16159292_16159635_16159744_16162913_16163273_16163453
ES.30119.6	chr7	-	180	1	Intergenic	novelGene_24920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	16157542	16157362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16157400_16157500
ES.3012.1	chr10	-	4286	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	-10	-17	-10	17	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCAAGTGTTTTGTTTT	NA	False	NA	18	True	AATAAA	-37	NA	67748502	67721915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
ES.3012.2	chr10	-	3186	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	-24	1097	-24	-1032	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATAACTCATCGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	67748516	67723029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
ES.3012.3	chr10	-	2762	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	2	1495	2	-1430	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGGTTTAAAATTTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	67748490	67723427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
ES.30120.1	chr7	+	669	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	150	-4	-34	0	multi-exon	FALSE	canonical	3	728	junction_1	16.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCTGAGTGATAGCTC	NA	False	NA	20	True	ATTAAA	-21	NA	16186853	16189419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16187096_16188045_16188139_16189085
ES.30120.2	chr7	+	1594	2	ISM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	167	1	-17	-1	intron_retention	FALSE	canonical	3	728	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAGACTCTGAGTGAT	NA	False	NA	15	True	ATTAAA	-16	NA	16186870	16189414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16187096_16188045
ES.30120.3	chr7	+	689	3	FSM	ENSMUSG00000019158.10	ENSMUST00000209536.2	699	3	5	5	5	-1	multi-exon	FALSE	canonical	3	42	junction_1	359.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAGACTCTGAGTGAT	NA	False	NA	15	True	ATTAAA	-16	NA	16186892	16189414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16187096_16187981_16188139_16189085
ES.30121.1	chr7	+	147	1	Intergenic	novelGene_24921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	16200631	16200778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16200600_16200800
ES.30122.1	chr7	+	2525	4	Intergenic	novelGene_24922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGACTTATTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	16230475	16247157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16231938_16232509_16232615_16245117_16245250_16246331
ES.30122.2	chr7	+	3798	1	FSM	ENSMUSG00000099423.2	ENSMUST00000189720.2	798	1	-2178	-822	-2178	822	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCCAAATAGAGGGACAC	NA	False	NA	NA	False	NA	NA	NA	16230478	16234276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16230500_16234300
ES.30122.3	chr7	+	3225	2	Genic_Genomic	ENSMUSG00000099423.2	novel	798	1	NA	NA	-2177	822	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCCAAATAGAGGGACAC	NA	False	NA	NA	False	NA	NA	NA	16230479	16234276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16231938_16232509
ES.30123.1	chr7	-	8244	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	172	731	116	-731	multi-exon	TRUE	canonical	3	71	junction_6	12.7366487830285	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGCCTGGGGCCAAGT	NA	False	NA	NA	False	AATAAA	-36	NA	16348746	16228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.10	chr7	-	7540	8	NNC	ENSMUSG00000058230.13	novel	6251	8	NA	NA	287	1212	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	44.7852016375307	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTGCTGCTGTCAGCT	NA	False	NA	-3	True	AATAAA	-18	NA	16348575	16228964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16332802_16332860_16348396
ES.30123.11	chr7	-	3547	6	NNC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	53388	1211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.3958331072527	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATAGTGCTGCTGTCAGC	-2	True	NA	-4	True	AATAAA	-17	NA	16295474	16228965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246435_16282987_16283133_16295382
ES.30123.12	chr7	-	7923	8	NNC	ENSMUSG00000058230.13	novel	6251	8	NA	NA	-13	1204	intron_retention	FALSE	canonical	0	0	junction_6	45.2318291399645	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGGAATAGTGCTGC	NA	False	NA	-11	True	AATAAA	-10	NA	16348931	16228972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16328124_16328217_16348396
ES.30123.13	chr7	-	6420	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	395	2332	339	201	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTAGCTTCTGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	16348523	16229975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.14	chr7	-	6846	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	-161	2462	-161	71	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGTTGGATGTTGT	NA	False	NA	NA	False	CATAAA	-16	NA	16349079	16230105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.15	chr7	-	5664	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	429	3054	373	-521	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTACAGGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	16348489	16230697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.16	chr7	-	4770	6	ISM	ENSMUSG00000058230.13	ENSMUST00000171937.2	6251	8	265	2096	265	-2096	internal_fragment	FALSE	canonical	3	71	junction_5	13.9283882771841	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTCCTCGTCCATGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	16348597	16232272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.17	chr7	-	175	1	Intergenic	novelGene_24923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAGAAAAGAAA	6549	False	NA	NA	False	NA	NA	NA	16241961	16241786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16241800_16242000
ES.30123.18	chr7	-	4283	4	ISM	ENSMUSG00000058230.13	ENSMUST00000171937.2	6251	8	256	16178	256	-16178	internal_fragment	FALSE	canonical	3	71	junction_3	17.7826382244655	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAAGACAGTTTGATCA	NA	False	NA	NA	False	NA	NA	NA	16348606	16246354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.19	chr7	-	9622	2	Genic_Genomic	ENSMUSG00000058230.13	novel	9147	7	NA	NA	45319	-63533	multi-exon	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTGGAACAGCTTAT	8915	False	NA	NA	False	NA	NA	NA	16303543	16293709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_16295085_16295296
ES.30123.2	chr7	-	6871	7	NNC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	49955	-853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.6109469879892	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	16298907	16228496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16228953_16229506_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382
ES.30123.20	chr7	-	5522	3	NNC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	255	-63555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-34	NA	16348607	16293731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16295085_16295296_16299255_16348396
ES.30123.3	chr7	-	7829	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	2	1316	2	1217	multi-exon	FALSE	canonical	3	71	junction_6	12.7366487830285	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCAGCTTATTT	NA	False	NA	2	True	AATAAA	-23	NA	16348916	16228959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ES.30123.4	chr7	-	7935	8	NNC	ENSMUSG00000058230.13	novel	6251	8	NA	NA	253	1215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.0092960919617	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCTGTCAGCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	16348609	16228961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16332802_16333218_16348396
ES.30123.5	chr7	-	5331	4	NIC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	51374	1215	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	46.7332857821917	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCTGTCAGCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	16297488	16228961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16231936_16232508_16232615_16282987_16283133_16295382
ES.30123.7	chr7	-	5305	6	NNC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	51612	1213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.0365690573664	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCTGCTGTCAGCTT	NA	False	NA	-2	True	AATAAA	-19	NA	16297250	16228963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16231936_16232508_16232615_16245113_16245250_16246332_16246411_16282987_16283133_16295382
ES.30123.8	chr7	-	6844	5	NIC	ENSMUSG00000058230.13	novel	9147	7	NA	NA	50642	1213	intron_retention	FALSE	canonical	3	90	junction_1	8.78564169540279	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCTGCTGTCAGCTT	NA	False	NA	-2	True	AATAAA	-19	NA	16298220	16228963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382
ES.30124.1	chr7	+	1252	1	FSM	ENSMUSG00000108316.2	ENSMUST00000207025.2	115	1	-1057	-80	-1057	80	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATGAAGCCTCTCATT	NA	False	NA	NA	False	AAAAAG	-31	NA	16349218	16350470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16349200_16350500
ES.30125.1	chr7	+	170	1	Intergenic	novelGene_24924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATGTACTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	16389223	16389393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16389200_16389400
ES.30126.1	chr7	-	178	1	Intergenic	novelGene_24925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTGTCAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	16419621	16419443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16419400_16419600
ES.30127.1	chr7	-	91	1	FSM	ENSMUSG00000108366.2	ENSMUST00000206264.2	795	1	747	-43	747	43	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAACCCTACC	NA	False	NA	NA	False	AATAAA	-15	NA	16453088	16452997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16453000_16453100
ES.30128.1	chr7	+	218	1	Intergenic	novelGene_24926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGGTACCAAGTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	16466980	16467198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16467000_16467200
ES.30129.1	chr7	-	194	1	Intergenic	novelGene_24927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAATAGAAGAGCCAGCAC	7323	False	NA	NA	False	AGTAAA	-7	NA	16469455	16469261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16469300_16469500
ES.3013.1	chr10	+	6010	6	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-166	31481	-21	-31481	5prime_fragment	FALSE	canonical	3	63	junction_2	12.9676520619579	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTCTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	67815378	67846647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329
ES.3013.10	chr10	+	2616	13	NNC	ENSMUSG00000037846.19	novel	2246	12	NA	NA	1	216	intron_retention	FALSE	canonical	0	0	junction_9	29.5700674481627	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTAATCTGCTATTCA	NA	False	NA	24	True	ATTAAA	-21	NA	67815545	67878344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67868182_67868338_67871618_67871782_67875860_67875969_67877208
ES.3013.12	chr10	+	3796	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	174	0	29	0	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTGATTCCTGGCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	67815573	67879698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.13	chr10	+	4071	3	NNC	ENSMUSG00000037846.19	novel	3970	12	NA	NA	29553	-20397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGCAACTC	NA	False	NA	NA	False	NA	NA	NA	67845097	67857731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_67845223_67853635_67854229_67854378
ES.3013.14	chr10	+	5967	6	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	33863	-214	-30390	214	3prime_fragment	FALSE	canonical	3	52	junction_4	11.7064085013295	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTGTAATCTGCTATT	NA	False	NA	22	True	ATTAAA	-19	NA	67849407	67878342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.2	chr10	+	2624	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-162	-216	-17	216	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTAATCTGCTATTCA	NA	False	NA	24	True	ATTAAA	-21	NA	67815382	67878344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.3	chr10	+	3967	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-155	-1566	-10	0	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCTTCTGATTCCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	67815389	67879694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.4	chr10	+	4476	9	ISM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	1	13951	1	-12381	5prime_fragment	FALSE	canonical	3	32	junction_2	18.9340962287615	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTCTCTAATTTTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	67815400	67865747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347
ES.3013.5	chr10	+	2588	9	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-124	14240	-7	-14240	5prime_fragment	FALSE	canonical	3	56	junction_6	12.7027310055751	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTTAAAGAGTT	NA	False	NA	NA	False	GATAAA	-10	NA	67815420	67863888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347
ES.3013.6	chr10	+	1688	6	ISM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	43	37318	8	-35748	5prime_fragment	FALSE	canonical	3	32	junction_2	22.3159136044214	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTAGCCTGCATGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67815442	67842380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329
ES.3013.7	chr10	+	6370	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-59	-4065	-42	2495	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTCGTGGAGACA	NA	False	NA	NA	False	ATTAAA	-19	NA	67815485	67882193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.8	chr10	+	6332	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	128	-2490	0	2490	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGGGCTTGGTTCGTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	67815527	67882188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ES.3013.9	chr10	+	4378	9	ISM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	-11	12337	6	-12337	5prime_fragment	FALSE	canonical	3	56	junction_6	12.7027310055751	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGTTTTTTGTTTGT	NA	False	NA	NA	False	AATACA	-13	NA	67815533	67865791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347
ES.30130.1	chr7	+	152	1	Intergenic	novelGene_24928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATATTTTTTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	16471283	16471435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16471300_16471400
ES.30131.1	chr7	+	833	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	3	0	3	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	19	True	AATAAA	-19	NA	16472337	16483219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ES.30131.2	chr7	+	2671	4	NNC	ENSMUSG00000008036.12	novel	1054	3	NA	NA	-1804	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	288.758645854207	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTCTGAGCCCTC	NA	False	NA	17	True	AATAAA	-17	NA	16478884	16483217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16479242_16479426_16481300_16482613_16482674_16482836
ES.30132.1	chr7	-	176	1	Intergenic	novelGene_24929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTTTAAAAAAACAA	8848	False	NA	NA	False	NA	NA	NA	16491480	16491304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16491300_16491500
ES.30133.1	chr7	-	671	1	Intergenic	novelGene_24930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCTTTGCTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	16514257	16513586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16513600_16514300
ES.30134.1	chr7	-	441	1	Intergenic	novelGene_24931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCCAGTTCACCACAA	NA	False	NA	NA	False	NA	NA	NA	16515010	16514569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16514600_16515000
ES.30135.1	chr7	+	2605	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	-16	175	-16	-175	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGTGTGTGTGCACT	NA	False	NA	NA	False	TTTAAA	-40	NA	16515248	16532024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.10	chr7	+	3894	8	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-31	intron_retention	FALSE	canonical	3	57	junction_1	719.126794757903	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16515293	16532168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.11	chr7	+	3810	7	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-32	intron_retention	FALSE	canonical	3	1461	junction_3	115.297802812254	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515293	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16516401_16519600_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.12	chr7	+	2673	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	553.393720035745	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCAAATGTATTGACC	NA	False	NA	28	True	AATAAA	-37	NA	16515293	16532154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523846_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.13	chr7	+	3270	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	2	-24	intron_retention	FALSE	canonical	3	57	junction_1	682.108495768818	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCTAGAGTCTGAGTAA	NA	False	NA	49	True	AATAAA	-23	NA	16515294	16532175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.14	chr7	+	2764	5	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-2961	intron_retention	FALSE	canonical	3	57	junction_1	746.921180580655	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	16515295	16524670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520838_16523701
ES.30135.15	chr7	+	4732	8	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-32	intron_retention	FALSE	canonical	3	57	junction_1	688.158382339177	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515295	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16530084_16531426
ES.30135.16	chr7	+	6928	7	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-32	intron_retention	FALSE	canonical	3	57	junction_1	606.222570971715	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515295	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.18	chr7	+	5907	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-26	intron_retention	FALSE	canonical	3	1461	junction_4	119.507834257757	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCCTAGAGTCTGAGT	NA	False	NA	47	True	AATAAA	-21	NA	16515295	16532173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.19	chr7	+	3768	9	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-33	intron_retention	FALSE	non_canonical	0	0	junction_5	768.676287116365	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACCATGGCCCTAGAG	NA	False	NA	40	True	AATAAA	-14	NA	16515295	16532166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16521346_16523295_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.2	chr7	+	4167	1	Genic_Genomic	ENSMUSG00000001918.18	novel	NA	NA	NA	NA	-16	-1678	mono-exon	FALSE	NA	NA	NA	NA	NA	1169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTGGAGTTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	16515248	16519415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16515200_16519400
ES.30135.20	chr7	+	2639	10	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	521.77569562333	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGACCATGGCCCTAG	NA	False	NA	38	True	AATAAA	-12	NA	16515295	16532164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426_16531876_16531934
ES.30135.21	chr7	+	3511	8	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-6	intron_retention	FALSE	canonical	3	57	junction_1	711.668146695079	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCAGGTGTGTTGTCAC	NA	False	NA	67	True	AATAAA	-41	NA	16515295	16532193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.22	chr7	+	1681	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-4117	mono-exon	FALSE	NA	NA	NA	NA	NA	1143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGGAGGGATTCTT	NA	False	NA	NA	False	AAAACA	-21	NA	16515295	16516976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16515300_16517000
ES.30135.23	chr7	+	4022	2	NNC	ENSMUSG00000001918.18	novel	475	4	NA	NA	3	-1696	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	16515295	16519397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480
ES.30135.24	chr7	+	2410	5	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-32	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	749.864446083424	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515295	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16516401_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.25	chr7	+	6455	8	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-28	intron_retention	FALSE	canonical	3	57	junction_1	563.301709855856	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGCCCTAGAGTCTGA	NA	False	NA	45	True	AATAAA	-19	NA	16515295	16532171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.26	chr7	+	5973	7	NIC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-31	intron_retention	FALSE	canonical	3	1461	junction_4	129.072008326102	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16515295	16532168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.27	chr7	+	2692	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	536.792324833357	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACCATGGCCCTAGAG	NA	False	NA	40	True	AATAAA	-14	NA	16515295	16532166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530082_16531432
ES.30135.29	chr7	+	3179	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-31	intron_retention	FALSE	canonical	3	1461	junction_4	113.413816960505	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16515295	16532168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16516401_16519600_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.3	chr7	+	2784	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	-16	-4	-16	4	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCACATGTCTTTCC	NA	False	NA	77	True	NA	NA	NA	16515248	16532203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.30	chr7	+	2812	8	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-32	intron_retention	FALSE	canonical	2	2	junction_2	734.229180703082	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515295	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.31	chr7	+	1976	3	ISM	ENSMUSG00000001918.18	ENSMUST00000206444.2	475	4	-1027	3	3	-3	intron_retention	FALSE	canonical	3	1546	junction_2	58.5	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16515295	16521101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16516401_16519600_16519644_16520273
ES.30135.32	chr7	+	2255	6	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-2954	intron_retention	FALSE	canonical	0	0	junction_4	786.179216209638	1216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	16515295	16524677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16519600_16519644_16520273_16520838_16523701_16523863_16524198_16524324_16524420
ES.30135.33	chr7	+	3551	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	547.349280053423	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACCATGGCCCTAGAG	NA	False	NA	40	True	AATAAA	-14	NA	16515295	16532166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516919_16519267_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.34	chr7	+	2646	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-45	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	586.985936625332	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCAAATGTATTGACC	NA	False	NA	28	True	AATAAA	-37	NA	16515295	16532154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16516401_16519600_16519644_16520273_16520319_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.35	chr7	+	3961	7	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	-33	intron_retention	FALSE	canonical	3	57	junction_1	754.37428081527	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACCATGGCCCTAGAG	NA	False	NA	40	True	AATAAA	-14	NA	16515295	16532166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.36	chr7	+	2677	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	3	-3121	mono-exon	FALSE	NA	NA	NA	NA	NA	1154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGACCACTTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	16515295	16517972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16515300_16518000
ES.30135.37	chr7	+	6596	8	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	57	junction_1	716.892044928407	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515295	16532199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16527806_16529682_16530084_16531426
ES.30135.38	chr7	+	3660	2	NNC	ENSMUSG00000001918.18	novel	475	4	NA	NA	3	-1678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTGGAGTTGTATGTG	NA	False	NA	NA	False	NA	NA	NA	16515295	16519415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16518807_16519266
ES.30135.4	chr7	+	2904	9	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	7	-7	intron_retention	FALSE	canonical	3	57	junction_1	676.027539657224	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACCAGGTGTGTTGTCA	NA	False	NA	66	True	AATAAA	-40	NA	16515271	16532192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.40	chr7	+	2091	11	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	-283	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	786.610100367393	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTAGAGTCTGAGTAATA	NA	False	NA	51	True	AATAAA	-25	NA	16516039	16532177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16519764_16519806_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.41	chr7	+	4724	6	NIC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	699	-31	intron_retention	FALSE	canonical	3	1461	junction_3	133.597305362047	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGGCCCTAGAGTC	NA	False	NA	42	True	AATAAA	-16	NA	16517021	16532168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.42	chr7	+	4438	6	NIC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	1154	-15	intron_retention	FALSE	canonical	3	1461	junction_3	136.729514004841	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAGTAATACCAGGTG	NA	False	NA	58	True	AATAAA	-32	NA	16517476	16532184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.43	chr7	+	2426	3	NNC	ENSMUSG00000001918.18	novel	396	3	NA	NA	-271	496	intron_retention	TRUE	canonical	0	0	junction_2	762.5	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGAAACACAAAAGTCTGCG	NA	False	NA	NA	False	NA	NA	NA	16518391	16521600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16520319_16520795_16521226_16521531
ES.30135.44	chr7	+	1763	9	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	123	-32	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	534.082800228579	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16518785	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16518953_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.45	chr7	+	1689	8	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	154	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	582.837324593042	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16518816	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16518953_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.46	chr7	+	1666	9	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	154	-32	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	541.199593495782	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16518816	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16518887_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.47	chr7	+	3807	5	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	-91	-32	intron_retention	FALSE	canonical	0	0	junction_1	740.838882618886	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16520204	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16521366_16522592_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.49	chr7	+	2280	6	NNC	ENSMUSG00000001918.18	novel	890	2	NA	NA	663	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	678.305830728293	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAGAGTCTGAGTAATAC	NA	False	NA	52	True	AATAAA	-26	NA	16520958	16532178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16521370_16523309_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.5	chr7	+	2646	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	8	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	550.361472125366	1295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515272	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523779_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.50	chr7	+	3335	5	ISM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	6600	0	1569	0	3prime_fragment	FALSE	canonical	3	1461	junction_1	137.884915781241	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16521864	16532199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.51	chr7	+	5741	4	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	2870	-2	intron_retention	FALSE	canonical	3	1624	junction_2	79.984720763128	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTGTTGTCACATGT	NA	False	NA	71	True	AATAAA	-45	NA	16523165	16532197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.52	chr7	+	1460	5	NNC	ENSMUSG00000001918.18	novel	890	2	NA	NA	-463	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	755.038533784866	1264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGACCATGGCCCTA	NA	False	NA	37	True	AATAAA	-11	NA	16526488	16532163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16526648_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.53	chr7	+	3789	2	NIC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	71	-45	intron_retention	FALSE	canonical	3	1804	junction_1	0	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCAAATGTATTGACC	NA	False	NA	28	True	AATAAA	-37	NA	16527022	16532154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16530084_16531426
ES.30135.54	chr7	+	3167	3	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	485	-32	intron_retention	FALSE	canonical	3	1624	junction_1	90	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16527586	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16529878_16529948_16530084_16531426
ES.30135.55	chr7	+	2634	1	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	2432	-32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16529533	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16529500_16532200
ES.30135.6	chr7	+	7013	6	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	-2	-32	intron_retention	FALSE	canonical	3	1461	junction_2	126.248960391759	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515290	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30135.7	chr7	+	2774	8	FSM	ENSMUSG00000001918.18	ENSMUST00000127401.8	2807	8	1	32	1	-32	multi-exon	FALSE	canonical	3	1461	junction_5	120.463052172753	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCATGGCCCTAGAGT	NA	False	NA	41	True	AATAAA	-15	NA	16515293	16532167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.8	chr7	+	2631	8	FSM	ENSMUSG00000001918.18	ENSMUST00000127401.8	2807	8	1	175	1	-175	multi-exon	FALSE	canonical	3	1461	junction_5	120.463052172753	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGGTGTGTGTGCACT	NA	False	NA	NA	False	TTTAAA	-40	NA	16515293	16532024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ES.30135.9	chr7	+	2818	10	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	649.005468979601	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515293	16532199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ES.30136.1	chr7	+	3224	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	-137	-5	-137	1	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCCAGGCCATCTGT	NA	False	NA	17	True	AATAAA	-17	NA	16550104	16574857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.10	chr7	+	3036	19	NNC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.775749464072	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550240	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550278_16550326_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.11	chr7	+	4503	16	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	350	junction_8	57.5305136427618	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGTTTTCCAGGCC	NA	False	NA	11	True	AATAAA	-11	NA	16550240	16574851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.12	chr7	+	5327	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	350	junction_7	56.8714284592888	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550242	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.14	chr7	+	7097	14	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	416	junction_9	45.4479349684824	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTTTTCCAGGCCATCT	NA	False	NA	15	True	AATAAA	-15	NA	16550243	16574855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.15	chr7	+	3093	18	NNC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	153.091690643041	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGTTTTCCAGGCC	NA	False	NA	11	True	AATAAA	-11	NA	16550244	16574851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572200_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.16	chr7	+	3431	17	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	3	1	intron_retention	FALSE	canonical	3	416	junction_12	44.8774372597188	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCCAGGCCATCTGT	NA	False	NA	17	True	AATAAA	-17	NA	16550244	16574857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.17	chr7	+	3026	19	NNC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.775749464072	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550249	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550273_16550320_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.19	chr7	+	4758	16	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	16	0	intron_retention	FALSE	canonical	3	416	junction_11	45.279575969746	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550257	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.2	chr7	+	4555	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-125	-1	intron_retention	FALSE	canonical	3	350	junction_8	57.1728464832739	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTTTTCCAGGCCATCT	NA	False	NA	15	True	AATAAA	-15	NA	16550116	16574855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.21	chr7	+	5062	16	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	16	2	intron_retention	FALSE	canonical	3	350	junction_8	58.6433286913354	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550257	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16567027_16567102_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.22	chr7	+	5392	16	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	16	0	intron_retention	FALSE	canonical	3	350	junction_7	57.2417873779481	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550257	16574856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.23	chr7	+	5331	17	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	17	-1	intron_retention	FALSE	canonical	3	94	junction_7	107.881228093677	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGTTTTCCAGGCC	NA	False	NA	11	True	AATAAA	-11	NA	16550258	16574851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.24	chr7	+	3207	18	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	123.928766234261	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550258	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565270_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.25	chr7	+	3705	17	NNC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	17	2	intron_retention	FALSE	non_canonical	0	0	junction_4	218.302390261192	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550258	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16558406_16558495_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566850_16567027_16567102_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574134
ES.30136.26	chr7	+	3124	18	NNC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	128.180722333176	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550258	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566793_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.27	chr7	+	2969	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	127.725719316824	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550259	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.28	chr7	+	6729	15	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	18	-2	intron_retention	FALSE	canonical	3	350	junction_7	58.7664002293689	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATAGGTTTTCCAGGC	NA	False	NA	10	True	AATAAA	-10	NA	16550259	16574850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.3	chr7	+	4871	15	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	-19	2	intron_retention	FALSE	canonical	3	416	junction_10	45.5167607613292	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550222	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.30	chr7	+	3049	16	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	19	1	intron_retention	FALSE	canonical	2	6	junction_8	130.534218587397	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCCAGGCCATCTGT	NA	False	NA	17	True	AATAAA	-17	NA	16550260	16574857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.31	chr7	+	2873	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	27	182	27	-182	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTGTGATAGTCTGT	NA	False	NA	NA	False	TATAAA	-34	NA	16550268	16574670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.33	chr7	+	4423	17	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	27	2	intron_retention	FALSE	canonical	3	94	junction_8	107.966357607358	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550268	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.34	chr7	+	8680	17	NNC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	29	0	intron_retention	FALSE	non_canonical	0	0	junction_11	129.615883840485	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550270	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16570566_16570749_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.35	chr7	+	3289	19	NNC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_4	202.655214101363	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550280	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16558406_16558495_16559714_16559776_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.36	chr7	+	5822	12	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	783	0	intron_retention	FALSE	canonical	3	416	junction_7	48.7979473894291	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16558765	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16560587_16562599_16562742_16564250_16564411_16564949_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.37	chr7	+	5601	11	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	1545	2	intron_retention	FALSE	canonical	3	416	junction_6	48.3979338401961	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16559527	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16560587_16562599_16562742_16564250_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.38	chr7	+	3824	13	NNC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-2155	0	intron_retention	FALSE	canonical	0	0	junction_1	196.387089414984	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16560548	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16560587_16562607_16562742_16564250_16564411_16564949_16565064_16565270_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.39	chr7	+	5655	9	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-1362	0	intron_retention	FALSE	canonical	3	461	junction_2	34.123855292156	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16561341	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16562742_16564250_16564411_16564949_16567027_16567102_16567151_16567799_16567922_16571486_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.4	chr7	+	3118	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	417	0	-11	0	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550230	16574856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.40	chr7	+	2241	11	ISM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	14923	4	-287	0	3prime_fragment	FALSE	canonical	3	94	junction_1	135.454641854755	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16564736	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.41	chr7	+	1044	3	ISM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	22243	0	4	0	3prime_fragment	FALSE	canonical	3	528	junction_1	23.5	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16572484	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16572575_16573665_16573898_16574130
ES.30136.5	chr7	+	3014	17	NNC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.090811059502	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGTTTTCCAGGCCATC	NA	False	NA	14	True	AATAAA	-14	NA	16550230	16574854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566836_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.6	chr7	+	2920	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	420	195	-8	-191	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACGTTATCACTGTGTG	NA	False	NA	NA	False	TATAAA	-25	NA	16550233	16574661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.7	chr7	+	3166	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	350	junction_8	56.0801602618965	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550233	16574852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30136.8	chr7	+	4252	15	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_1	141.101009556839	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGTTTTCCAGGCC	NA	False	NA	11	True	AATAAA	-11	NA	16550237	16574851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16550560_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ES.30137.1	chr7	-	2816	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	-11	22	-11	-22	multi-exon	FALSE	canonical	3	12	junction_2	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGTTTGTTTCCTTGCTT	NA	False	NA	NA	False	TTTAAA	-24	NA	16550668	16543192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16545902_16548988_16549052_16550624
ES.30137.3	chr7	-	5882	2	FSM	ENSMUSG00000048920.9	ENSMUST00000205368.2	416	2	4	-5470	4	-28	multi-exon	FALSE	canonical	3	12	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGAGCCGTTTGTTTCC	NA	False	NA	NA	False	TTTAAA	-18	NA	16550653	16543198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16549052_16550624
ES.30137.5	chr7	-	157	1	Intergenic	novelGene_24932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATTTGTGATCTAAT	NA	False	NA	NA	False	NA	NA	NA	16546742	16546585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16546600_16546700
ES.30138.1	chr7	+	3234	19	FSM	ENSMUSG00000041187.17	ENSMUST00000168093.9	3251	19	10	7	10	-7	multi-exon	FALSE	canonical	2	2	junction_2	2.9465401347058	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCACCCACTGGCCATG	NA	False	NA	NA	False	AATAAA	-26	NA	16576836	16604290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16576959_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ES.30138.3	chr7	+	3667	18	FSM	ENSMUSG00000041187.17	ENSMUST00000086104.6	3628	18	-136	97	27	-5	multi-exon	FALSE	canonical	2	2	junction_1	3.00518582928113	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCACTGGCCATGGT	NA	False	NA	NA	False	AATAAA	-28	NA	16576853	16604292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ES.30138.4	chr7	+	5899	4	NNC	ENSMUSG00000041187.17	novel	1115	4	NA	NA	-4143	14	intron_retention	FALSE	non_canonical	0	0	junction_1	2.44948974278318	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGTCTTTTTCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	16593128	16604403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16597336_16597531_16597965_16599611_16599880_16603412
ES.30139.1	chr7	-	168	1	Intergenic	novelGene_24933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAAATGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	16580862	16580694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16580700_16580900
ES.3014.1	chr10	-	3085	1	Genic_Genomic	ENSMUSG00000086838.2	novel	NA	NA	NA	NA	-2502	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	67864958	67861873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_67861900_67865000
ES.30140.1	chr7	-	188	1	Intergenic	novelGene_24934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTGGTAATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	16594007	16593819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16593800_16594000
ES.30141.1	chr7	+	2830	4	FSM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	-2	161	-2	-161	multi-exon	FALSE	canonical	3	26	junction_3	6.53197264742181	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTTCTGCACTGAAT	NA	False	NA	28	True	AATAAA	-24	NA	16609239	16621226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16609599_16617051_16617149_16617282_16617436_16619005
ES.30141.2	chr7	+	1395	2	NNC	ENSMUSG00000078794.5	novel	2989	4	NA	NA	19	-170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCCTGGATTCTTGTTCT	NA	False	NA	19	True	AATAAA	-15	NA	16609260	16621217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_16609470_16620031
ES.30141.3	chr7	+	4345	3	ISM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	45	169	45	-169	intron_retention	FALSE	canonical	3	34	junction_2	4	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGGATTCTTGTTCTG	NA	False	NA	20	True	AATAAA	-16	NA	16609286	16621218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_16609599_16617051_16617149_16617282
ES.30141.4	chr7	+	3937	1	NIC	ENSMUSG00000078794.5	novel	2989	4	NA	NA	8038	-171	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCCCTGGATTCTTGTTC	1666	False	NA	18	True	AATAAA	-14	NA	16617279	16621216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16617300_16621200
ES.30142.1	chr7	-	190	1	Intergenic	novelGene_24935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAGTAAGGTATACCTC	2043	False	NA	NA	False	NA	NA	NA	16617829	16617639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16617600_16617800
ES.30143.1	chr7	-	1758	1	Antisense	novelGene_ENSMUSG00000078794.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGAACGTGATCTGTC	NA	False	NA	NA	False	NA	NA	NA	16620608	16618850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_16618800_16620600
ES.30144.1	chr7	+	2745	4	NIC	ENSMUSG00000063594.6	novel	719	5	NA	NA	6	9	intron_retention	FALSE	canonical	1	1	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGAGTCAAGGGCAG	NA	False	NA	NA	False	AATAAA	-34	NA	16625716	16629370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_16626282_16626374_16626437_16627045_16628953_16629159
ES.30145.1	chr7	-	3056	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	120	-886	120	886	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCACTGTGTGTTCC	NA	False	NA	NA	False	AGTAAA	-12	NA	16657919	16648417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ES.30145.11	chr7	-	939	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	-75	1426	-75	339	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGACTGCTCTCTCTCC	NA	False	NA	-6	True	GATAAA	-24	NA	16658114	16650729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ES.30145.13	chr7	-	1095	6	NNC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	-190	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	972.015637734291	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGACTGCTCTCT	NA	False	NA	-10	True	GATAAA	-20	NA	16658229	16650733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651699_16653559_16653591_16657765
ES.30145.2	chr7	-	2428	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	-124	-14	-124	14	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTCCTCAGCCTTCCT	NA	False	NA	0	True	AATAAA	-29	NA	16658163	16649289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ES.30145.5	chr7	-	2435	7	NNC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	-49	0	intron_retention	FALSE	canonical	1	1	junction_5	1142.70031066767	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16658088	16649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16652726_16652823_16653559_16653591_16657765
ES.30145.6	chr7	-	2158	6	NNC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	124	0	intron_retention	FALSE	non_canonical	0	0	junction_3	971.535073993729	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657915	16649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651517_16651654_16653559_16653591_16657765
ES.30145.8	chr7	-	2096	5	NNC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	-99	0	intron_retention	FALSE	canonical	0	0	junction_4	1051.65904645945	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657853	16649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657742
ES.30146.1	chr7	-	2288	1	Intergenic	novelGene_24936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	16661624	16659336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16659300_16661600
ES.30146.2	chr7	-	225	1	Intergenic	novelGene_24937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGTTATACACTAA	NA	False	NA	NA	False	AATAAA	-6	NA	16661235	16661010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16661000_16661200
ES.30147.1	chr7	+	171	1	Intergenic	novelGene_24938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	16671970	16672141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_16672000_16672100
ES.30148.1	chr7	+	4168	1	FSM	ENSMUSG00000070802.6	ENSMUST00000094807.6	4147	1	-18	-3	-18	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTGGTCTGGAAAGT	NA	False	NA	NA	False	AATGAA	-28	NA	16678588	16682756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_16678600_16682800
ES.30149.1	chr7	-	203	1	Intergenic	novelGene_24939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGATTTTAGTTCCAG	NA	False	NA	NA	False	NA	NA	NA	16700923	16700720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_16700700_16700900
ES.3015.1	chr10	-	2775	1	Antisense	novelGene_ENSMUSG00000037846.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACGGTCATATGTACTT	NA	False	NA	NA	False	AAGAAA	-16	NA	67879946	67877171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_67877200_67879900
ES.30150.1	chr7	+	3592	2	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1098	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTTTCCGAGGTGG	5774	False	NA	19	True	AATAAA	-16	NA	16727730	16731440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16727843_16727960
ES.30150.2	chr7	+	3618	2	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1144	1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCCGAGGTGGCA	5820	False	NA	21	True	AATAAA	-18	NA	16727776	16731442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16729666_16729713
ES.30150.3	chr7	+	3609	2	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1150	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTTTCCGAGGTGG	5826	False	NA	19	True	AATAAA	-16	NA	16727782	16731440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16729660_16729708
ES.30150.5	chr7	+	3543	2	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1218	-3	multi-exon	TRUE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTGTTTCCGAGGT	5894	False	NA	17	True	AATAAA	-14	NA	16727850	16731438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_16729654_16729698
ES.30151.1	chr7	-	2126	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	-49	-5	-41	5	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGACGTGTGTCCACCACG	NA	False	NA	2	True	AATAAA	-42	NA	16761890	16738559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.10	chr7	-	1994	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-13	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.196515024393	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761747	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16740995_16741172_16741650_16741755_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.11	chr7	-	2280	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	35	-15	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761784	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.12	chr7	-	2358	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-19	-15	intron_retention	FALSE	canonical	3	1078	junction_5	54.9235832771315	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761753	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.13	chr7	-	2075	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-16	-15	intron_retention	FALSE	canonical	3	1078	junction_5	54.0114772008828	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761750	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.14	chr7	-	2861	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-20	-15	intron_retention	FALSE	canonical	3	1078	junction_5	55.1370111631017	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761754	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.18	chr7	-	1730	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-24	-17	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	321.136283214299	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCTCATCTCAAACCC	NA	False	NA	-20	True	AATAAA	-20	NA	16761758	16738581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16761617
ES.30151.19	chr7	-	1928	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-20	-17	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	316.880662342571	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCTCATCTCAAACCC	NA	False	NA	-20	True	AATAAA	-20	NA	16761754	16738581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739228_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.2	chr7	-	1936	3	NIC	ENSMUSG00000003099.12	novel	539	5	NA	NA	-127	-8	intron_retention	FALSE	canonical	3	1103	junction_2	16	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAAACCCACCTCGACG	NA	False	NA	-11	True	AATAAA	-29	NA	16741135	16738572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16740164_16740256_16740298_16740831
ES.30151.21	chr7	-	2243	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	56	-17	intron_retention	FALSE	canonical	0	0	junction_11	323.500839857379	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCTCATCTCAAACCC	NA	False	NA	-20	True	AATAAA	-20	NA	16761484	16738581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761352
ES.30151.23	chr7	-	3952	9	NIC	ENSMUSG00000003099.12	novel	1786	12	NA	NA	-20	-20	intron_retention	FALSE	canonical	3	1078	junction_5	58.8764596422034	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAAACCTCATCTCAAA	NA	False	NA	-23	True	AATAAA	-17	NA	16761754	16738584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.24	chr7	-	3102	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-10	-20	intron_retention	FALSE	canonical	3	1050	junction_5	59.6945558656734	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAAACCTCATCTCAAA	NA	False	NA	-23	True	AATAAA	-17	NA	16761829	16738584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.3	chr7	-	1954	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-8	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	317.847797258723	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAAACCCACCTCGA	NA	False	NA	-13	True	AATAAA	-27	NA	16761742	16738574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743913_16749322_16749471_16756339_16756582_16761617
ES.30151.4	chr7	-	1987	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-20	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	316.200918457447	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAAACCCACCTCGA	NA	False	NA	-13	True	AATAAA	-27	NA	16761754	16738574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742996_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.5	chr7	-	3233	10	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	-10	intron_retention	FALSE	canonical	3	1078	junction_5	56.5733436335218	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAAACCCACCTCGA	NA	False	NA	-13	True	AATAAA	-27	NA	16761841	16738574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.6	chr7	-	2910	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-32	-12	intron_retention	FALSE	canonical	3	1078	junction_5	55.6956910362014	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCTCAAACCCACCTC	NA	False	NA	-15	True	AATAAA	-25	NA	16761766	16738576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16741757_16742538_16742638_16742917_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.7	chr7	-	1935	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-20	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	317.791718565618	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761754	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756374_16756582_16761617
ES.30151.8	chr7	-	2786	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	-20	-15	intron_retention	FALSE	canonical	3	1050	junction_5	58.3008725109427	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761754	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16743922_16749322_16749471_16756339_16756582_16761617
ES.30151.9	chr7	-	2912	13	NNC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	239	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	310.486569310529	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCATCTCAAACCCAC	NA	False	NA	-18	True	AATAAA	-22	NA	16761301	16738579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16760222
ES.30152.1	chr7	-	6480	15	FSM	ENSMUSG00000004328.16	ENSMUST00000108492.9	6402	15	33	-111	-10	111	multi-exon	TRUE	canonical	0	0	junction_10	3.50218590632322	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGCCTCAAATTCACTGT	NA	False	NA	NA	False	NA	NA	NA	16796319	16765320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184_16790376_16796280
ES.30152.2	chr7	-	6420	15	FSM	ENSMUSG00000004328.16	ENSMUST00000108492.9	6402	15	-17	-1	-17	1	multi-exon	FALSE	canonical	0	0	junction_10	3.50218590632322	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGTGTTGACTCATCT	NA	False	NA	0	True	CATAAA	-26	NA	16796369	16765430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184_16790376_16796280
ES.30152.3	chr7	-	2364	14	ISM	ENSMUSG00000004328.16	ENSMUST00000037762.11	2206	15	213	-245	213	245	3prime_fragment	FALSE	canonical	0	0	junction_10	3.62600730750544	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTGGTTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	16790391	16769413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184
ES.30153.1	chr7	+	400	1	Intergenic	novelGene_24940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	5859	False	NA	NA	False	NA	NA	NA	17722089	17722489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_17722100_17722500
ES.30154.1	chr7	+	155	1	Intergenic	novelGene_24941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAATAGATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	17965504	17965659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_17965500_17965700
ES.30155.1	chr7	+	2289	2	Intergenic	novelGene_24942	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATAATTGTTATTAA	NA	False	NA	NA	False	NA	NA	NA	18431596	18433954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_18432097_18432165
ES.30156.1	chr7	-	6412	1	Intergenic	novelGene_24943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGAAGAAGTGAGTGA	381	False	NA	NA	False	AAAAAG	-8	NA	18616121	18609709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_18609700_18616100
ES.30157.1	chr7	+	782	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	-72	-16	-72	-2	multi-exon	FALSE	canonical	3	241	junction_2	21	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGGTCACATGACCCT	NA	False	NA	22	True	AATAAA	-31	NA	18618532	18624382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18618899_18623202_18623325_18624088
ES.30157.2	chr7	+	701	3	NNC	ENSMUSG00000030413.8	novel	694	3	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.5	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCATGCTCCCTCCGGTG	NA	False	NA	2	True	AATAAA	-11	NA	18618579	18624362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18618899_18623216_18623325_18624088
ES.30158.1	chr7	-	2010	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	11	1	-6	0	multi-exon	FALSE	canonical	3	126	junction_7	27.4902887640592	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2771	False	NA	-2	True	AATAAA	-17	NA	18644329	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.10	chr7	-	1455	10	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	74.2489971666077	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2771	False	NA	-2	True	AATAAA	-17	NA	18644329	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18644057
ES.30158.11	chr7	-	1901	14	NNC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	66.8044926384924	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2777	False	NA	-2	True	AATAAA	-17	NA	18644323	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637774_18644057
ES.30158.12	chr7	-	1977	14	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	63.1146228801359	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2819	False	NA	-2	True	AATAAA	-17	NA	18644281	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626524_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.14	chr7	-	6331	13	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	84.7717523707042	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2807	False	NA	-2	True	AATAAA	-17	NA	18644293	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18634974_18639356_18641427_18641501
ES.30158.15	chr7	-	1418	10	NNC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.5295323581543	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2792	False	NA	-2	True	AATAAA	-17	NA	18644308	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626995_18627109_18627274_18627703_18627775_18627859_18628071_18644057
ES.30158.16	chr7	-	1900	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	58.7855407044825	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2796	False	NA	-2	True	AATAAA	-17	NA	18644304	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057_18644183_18644267
ES.30158.17	chr7	-	2114	13	NIC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	24	0	intron_retention	FALSE	canonical	3	29	junction_9	58.4755409456714	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2810	False	NA	-2	True	AATAAA	-17	NA	18644290	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633608_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.18	chr7	-	1784	14	NNC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	67.8974165310996	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2771	False	NA	-2	True	AATAAA	-17	NA	18644329	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644271
ES.30158.2	chr7	-	1999	14	NIC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_7	38.5657050949086	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2770	False	NA	-2	True	AATAAA	-17	NA	18644330	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.20	chr7	-	1872	14	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	61.9809094487543	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCTAGTGTGTGATTC	2817	False	NA	-3	True	AATAAA	-16	NA	18644283	18624809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637774_18644057
ES.30158.21	chr7	-	2907	14	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	5128	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	63.1779678471995	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCTAGTGTGTGATTC	7914	False	NA	-3	True	AATAAA	-16	NA	18639186	18624809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18638715_18638866
ES.30158.22	chr7	-	2417	13	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	126	junction_6	28.5404196807888	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCTAGTGTGTGATTC	2777	False	NA	-3	True	AATAAA	-16	NA	18644323	18624809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.24	chr7	-	1911	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	63.5952202670635	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCTAGTGTGTGATTC	2772	False	NA	-3	True	AATAAA	-16	NA	18644328	18624809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057_18644183_18644267
ES.30158.25	chr7	-	1901	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	61.318672456575	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCTAGTGTGTGATTC	2771	False	NA	-3	True	AATAAA	-16	NA	18644329	18624809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057_18644183_18644278
ES.30158.27	chr7	-	2213	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	75.9123084316935	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCCTAGTGTGTGATT	2768	False	NA	-4	True	AATAAA	-15	NA	18644332	18624810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18638163_18644057_18644183_18644278
ES.30158.28	chr7	-	1912	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	56.2710278156404	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCCTAGTGTGTGATT	2771	False	NA	-4	True	AATAAA	-15	NA	18644329	18624810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057_18644183_18644278
ES.30158.3	chr7	-	1989	14	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	62.938121203224	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2817	False	NA	-2	True	AATAAA	-17	NA	18644283	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637890_18644057
ES.30158.30	chr7	-	3324	14	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	4679	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	77.2382772936446	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCCTAGTGTGTGATT	7465	False	NA	-4	True	AATAAA	-15	NA	18639635	18624810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633608_18634843_18635002_18637394_18637478_18637706_18638715_18638866
ES.30158.31	chr7	-	1494	5	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	59	7960	33	715	5prime_fragment	FALSE	canonical	3	207	junction_2	4.02336923485777	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTGCATGGTGAGTGT	2819	False	NA	NA	False	ATTAAA	-24	NA	18644281	18632767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.4	chr7	-	2084	13	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_8	64.438762920052	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2793	False	NA	-2	True	AATAAA	-17	NA	18644307	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18628071_18633471_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.5	chr7	-	3670	12	NNC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	5073	0	intron_retention	TRUE	non_canonical	0	0	junction_11	73.4130170635982	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	7859	False	NA	-2	True	AATAAA	-17	NA	18639241	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18638723_18638798
ES.30158.6	chr7	-	1793	13	NNC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.7110498613262	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2778	False	NA	-2	True	AATAAA	-17	NA	18644322	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18625099_18625239_18625310_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627703_18627775_18627859_18628071_18633482_18633608_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.7	chr7	-	2386	13	NIC	ENSMUSG00000074358.10	novel	1961	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	29	junction_9	58.7458627384847	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2778	False	NA	-2	True	AATAAA	-17	NA	18644322	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633608_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30158.9	chr7	-	2532	12	NIC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	207	junction_5	11.3886996333578	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2778	False	NA	-2	True	AATAAA	-17	NA	18644322	18624808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ES.30159.1	chr7	-	160	1	Intergenic	novelGene_24944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTGCAAGCTA	7323	False	NA	NA	False	AATAAA	-9	NA	18649401	18649241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_18649200_18649400
ES.3016.1	chr10	-	606	2	Intergenic	novelGene_2350	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAAGATTCTAAGGCTC	NA	False	NA	NA	False	AATAAA	-23	NA	67902075	67900369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67900868_67901967
ES.30160.1	chr7	+	183	1	Intergenic	novelGene_24945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAACACACAACTA	2356	False	NA	NA	False	NA	NA	NA	18649439	18649622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_18649400_18649600
ES.30161.1	chr7	-	3111	1	Antisense	novelGene_ENSMUSG00000030411.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGACACACGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	18692057	18688946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_18688900_18692100
ES.30162.1	chr7	+	1468	1	ISM	ENSMUSG00000030411.17	ENSMUST00000032571.10	8372	4	34704	3260	34704	-3260	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	18694516	18695984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18694500_18696000
ES.30162.2	chr7	+	3697	1	ISM	ENSMUSG00000030411.17	ENSMUST00000032571.10	8372	4	35079	656	35079	-656	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTCTAATGTTGTCT	NA	False	NA	NA	False	GATAAA	-13	NA	18694891	18698588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18694900_18698600
ES.30163.1	chr7	+	2144	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	29	0	29	0	multi-exon	FALSE	canonical	2	7	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAGGCTCTGAGACAG	6993	False	NA	NA	False	AATAAA	-18	NA	18725198	18735689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18725280_18725756_18726546_18734415
ES.30163.2	chr7	+	2726	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	61	-614	-13	612	multi-exon	FALSE	canonical	2	7	junction_2	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGGTTGTGAACATAGT	7025	False	NA	NA	False	AATAAA	-16	NA	18725230	18736303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18725280_18725756_18726546_18734415
ES.30163.3	chr7	+	177	1	Intergenic	novelGene_24946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAATAAAATAA	5063	False	NA	NA	False	NA	NA	NA	18732095	18732272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_18732100_18732300
ES.30164.1	chr7	-	887	4	FSM	ENSMUSG00000086533.3	ENSMUST00000206304.2	441	4	-12	-434	-1	434	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGTCTTTCCTTTCTC	6	False	NA	NA	False	NA	NA	NA	18735132	18726724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18727267_18731314_18731396_18732771_18732925_18735021
ES.30165.1	chr7	+	3198	2	Genic_Genomic	ENSMUSG00000044030.5	novel	2734	1	NA	NA	-702	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATGGTACTGAGATTCT	NA	False	NA	19	True	ATTAAA	-25	NA	18737266	18740700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_18737467_18737702
ES.30165.2	chr7	+	2572	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	-19	181	-19	-181	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCCTTTAGTTTTTA	NA	False	NA	31	True	AATAAA	-31	NA	18737949	18740521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18737900_18740500
ES.30165.3	chr7	+	2203	2	Genic_Genomic	ENSMUSG00000044030.5	novel	2734	1	NA	NA	16	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATGGTACTGAGATTC	NA	False	NA	18	True	ATTAAA	-24	NA	18737984	18740699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_18740024_18740535
ES.30166.1	chr7	-	2142	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	-106	1	-106	-1	multi-exon	FALSE	canonical	3	25	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTAGTGTCTTTTTCT	NA	False	NA	-4	True	ATTAAA	-15	NA	18757569	18747209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18749056_18757273
ES.30166.2	chr7	-	1918	3	NNC	ENSMUSG00000040891.7	novel	2037	2	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTAGTGTCTTTTTCT	NA	False	NA	-4	True	ATTAAA	-15	NA	18757469	18747209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18748723_18748846_18749056_18757273
ES.30167.1	chr7	+	4825	22	ISM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	-66	2861	-66	3	5prime_fragment	FALSE	canonical	3	129	junction_5	14.4793229693516	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCAGTGGTGTTTGGG	NA	False	NA	10	True	AATAAA	-23	NA	18758235	18785681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.11	chr7	+	4047	27	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	34.0989033122855	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758329	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764640_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.12	chr7	+	4596	23	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	34.9953066510826	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18758329	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18784094
ES.30167.13	chr7	+	3285	21	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.6272507632434	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758337	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758440_18770691_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.14	chr7	+	8008	17	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	129	junction_5	15.5040317337137	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18758341	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.16	chr7	+	6519	19	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	0	5	intron_retention	FALSE	canonical	3	129	junction_5	15.4272486205415	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGTGGTGTTTGGGGA	NA	False	NA	12	True	AATAAA	-25	NA	18758344	18785683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.17	chr7	+	5889	25	NIC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	intron_retention	FALSE	canonical	3	103	junction_22	19.0021471739965	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758345	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.18	chr7	+	3973	26	NIC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	33.7893711098623	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758345	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787839_18788224_18788313
ES.30167.19	chr7	+	4639	22	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	35.9940156275697	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18758345	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781445_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.2	chr7	+	4158	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	-37	-5	-37	4	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGTGCCTGTGTTAGAC	NA	False	NA	20	True	AATAAA	-34	NA	18758264	18788547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.21	chr7	+	3165	23	ISM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	46	2082	0	782	5prime_fragment	FALSE	canonical	3	114	junction_22	16.4886637741768	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACTCATCATGAAGCAGG	NA	False	NA	NA	False	GGGGCT	-20	NA	18758347	18786460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291
ES.30167.23	chr7	+	3361	22	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.2271936301708	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758348	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763061_18771768_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.24	chr7	+	6801	26	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_9	35.0823944450774	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758348	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772842_18772889_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.25	chr7	+	4530	26	NIC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	0	intron_retention	FALSE	canonical	3	103	junction_23	19.3310527390517	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	15	True	AATAAA	-29	NA	18758348	18788542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.26	chr7	+	5717	20	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	129	junction_5	15.0248178809119	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGGCCAGTGGTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	18758348	18785678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18779887_18780679_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.27	chr7	+	5166	21	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	1	-4	intron_retention	FALSE	canonical	3	129	junction_5	14.6467573203081	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCACATGGCCAGTGGT	NA	False	NA	3	True	AATAAA	-16	NA	18758348	18785674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.28	chr7	+	5423	26	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_16	34.6138469402059	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758348	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781376_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.29	chr7	+	3189	20	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.3252590958567	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758348	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758405_18771768_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.3	chr7	+	4092	27	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	34.3340705767152	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	15	True	AATAAA	-29	NA	18758265	18788542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780839_18781445_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.30	chr7	+	4152	23	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	34.9953066510826	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18758349	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18784518
ES.30167.33	chr7	+	4053	27	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.6843336439639	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCCTGAGGATGTGCC	NA	False	NA	10	True	AATAAA	-24	NA	18758350	18788537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769753_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783959_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.34	chr7	+	4788	26	NIC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_16	35.1316609342627	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	15	True	AATAAA	-29	NA	18758351	18788542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18780828_18781445_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.36	chr7	+	4663	22	NNC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	35.377523387	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCAGTGGTGTTTGGG	NA	False	NA	10	True	AATAAA	-23	NA	18758359	18785681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764640_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.37	chr7	+	4266	24	NNC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.9354091055915	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGGCCAGTGGTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	18758359	18785678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18761491_18761614_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18784518
ES.30167.38	chr7	+	5170	21	NNC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	15	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	48.2906564461491	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTCACATGGCCAGTGG	NA	False	NA	2	True	AATAAA	-15	NA	18758365	18785673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769739_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18779887_18780679_18780839_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.39	chr7	+	4655	22	ISM	ENSMUSG00000023118.16	ENSMUST00000146903.8	4781	23	4482	1	4482	-1	3prime_fragment	FALSE	canonical	0	0	junction_6	47.7582251822904	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACATGGCCAGTGGTGTT	NA	False	NA	6	True	AATAAA	-19	NA	18762832	18785677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770088_18770163_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.4	chr7	+	2487	18	NNC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	38.7358189253831	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATGTGCCTGTGTTAG	NA	False	NA	18	True	AATAAA	-32	NA	18758265	18788545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780749_18788493
ES.30167.40	chr7	+	4767	19	NIC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-9711	3	intron_retention	FALSE	canonical	3	103	junction_16	20.1224645669191	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGTGCCTGTGTTAGA	NA	False	NA	19	True	AATAAA	-33	NA	18769907	18788546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.41	chr7	+	4372	10	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-5153	-2	intron_retention	FALSE	canonical	3	144	junction_2	10.4892655299608	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18774465	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18779887_18780679_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.42	chr7	+	5014	8	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-3117	-2	intron_retention	FALSE	canonical	3	144	junction_1	11.4997781699989	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACATGGCCAGTGGTGT	NA	False	NA	5	True	AATAAA	-18	NA	18776501	18785676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18776708_18777349_18777501_18778859_18779639_18779772_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.43	chr7	+	4124	3	NIC	ENSMUSG00000023118.16	novel	799	8	NA	NA	1211	-4	intron_retention	FALSE	canonical	3	155	junction_1	10	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCACATGGCCAGTGGT	NA	False	NA	3	True	AATAAA	-16	NA	18780829	18785674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18782483_18782764_18782866_18783304
ES.30167.5	chr7	+	5939	25	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-25	2	intron_retention	FALSE	canonical	0	0	junction_4	35.0392389170896	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTGAGGATGTGCCTG	NA	False	NA	12	True	AATAAA	-26	NA	18758276	18788539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764622_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.6	chr7	+	5478	21	NIC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-6	-6	intron_retention	FALSE	canonical	0	0	junction_16	36.8677026677823	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTCACATGGCCAGTG	NA	False	NA	1	True	AATAAA	-14	NA	18758295	18785672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18780828_18781445_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30167.7	chr7	+	4004	27	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_25	33.5138406452155	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGTGCCTGTGTTAGAC	NA	False	NA	20	True	AATAAA	-34	NA	18758295	18788547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787962_18788224_18788313
ES.30167.8	chr7	+	4075	27	NNC	ENSMUSG00000023118.16	novel	4116	27	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	34.0331373497922	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	15	True	AATAAA	-29	NA	18758321	18788542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786312_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ES.30167.9	chr7	+	6036	20	NNC	ENSMUSG00000023118.16	novel	4781	23	NA	NA	-20	2	intron_retention	FALSE	canonical	0	0	junction_9	37.4198312036949	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCCAGTGGTGTTTGG	NA	False	NA	9	True	AATAAA	-22	NA	18758324	18785680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18773967_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779639_18779772_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862
ES.30168.1	chr7	-	175	1	Intergenic	novelGene_24947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGGCAGAAGATGA	NA	False	NA	NA	False	NA	NA	NA	18803476	18803301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_18803300_18803500
ES.30169.1	chr7	+	210	1	Intergenic	novelGene_24948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCCTCAGCTGATGGCA	NA	False	NA	NA	False	NA	NA	NA	18805912	18806122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_18805900_18806100
ES.3017.1	chr10	+	2622	3	Intergenic	novelGene_2353	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCCAGAGATTCGC	NA	False	NA	NA	False	NA	NA	NA	67906978	67909678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_67907911_67907948_67909070_67909109
ES.30170.1	chr7	+	3436	3	ISM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-42	-1	-42	1	intron_retention	FALSE	canonical	3	302	junction_1	22	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTCTGTTCCCTGGGG	NA	False	NA	15	True	ACTAAA	-15	NA	18810109	18816702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18810627_18811979_18812163_18813966
ES.30170.10	chr7	+	8218	17	Fusion	ENSMUSG00000030410.17_ENSMUSG00000030409.17	novel	2591	16	NA	NA	-10	0	intron_retention	TRUE	canonical	0	0	junction_14	109.04464395375	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCGCAATATCTCTGTT	NA	False	NA	19	True	AATAAA	-22	NA	18810141	18827746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826342_18826558_18826874
ES.30170.11	chr7	+	3851	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	-1766	-5	0	4	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGTTCCCTGGGGCAG	NA	False	NA	18	True	ACTAAA	-18	NA	18810151	18816705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
ES.30170.12	chr7	+	2579	4	NNC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.304242289072	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810152	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810789_18811979_18812163_18813966_18815227_18816200
ES.30170.13	chr7	+	2562	5	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.601959495395	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810159	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810627_18811979_18812163_18813966_18815304_18815843_18815919_18816200
ES.30170.14	chr7	+	2381	6	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.436871430638	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810164	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810303_18810401_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ES.30170.16	chr7	+	2324	4	NNC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-7	-16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	122.208383054882	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCCTTGTTTGCACAG	NA	False	NA	-3	True	NA	NA	NA	18810175	18816684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810627_18811979_18812109_18813966_18815227_18816200
ES.30170.17	chr7	+	2378	6	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	120.436871430638	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810180	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810627_18811979_18812163_18813966_18814829_18814914_18815227_18815843_18815919_18816200
ES.30170.18	chr7	+	3690	3	NNC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-2	1	intron_retention	FALSE	canonical	2	3	junction_1	81	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTCTGTTCCCTGGGG	NA	False	NA	15	True	ACTAAA	-15	NA	18810180	18816702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18812109_18813966_18815227_18816200
ES.30170.19	chr7	+	2631	5	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.699843382833	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTCCCTGGGGCAGG	NA	False	NA	19	True	ACTAAA	-19	NA	18810181	18816706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810789_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ES.30170.2	chr7	+	3808	3	NIC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-34	2	intron_retention	FALSE	canonical	3	165	junction_2	90.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTCTGTTCCCTGGGGC	NA	False	NA	16	True	ACTAAA	-16	NA	18810117	18816703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18812163_18813966_18815227_18816200
ES.30170.20	chr7	+	2456	5	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	133.190418198908	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810182	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815913_18816200
ES.30170.21	chr7	+	2468	4	NNC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	153.787732497318	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810183	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810627_18811979_18812163_18813966_18815309_18816200
ES.30170.22	chr7	+	6412	19	Fusion	ENSMUSG00000030410.17_ENSMUSG00000030409.17	novel	2591	16	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_5	117.409184762806	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	NA	False	NA	16	True	AATAAA	-19	NA	18810188	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826342_18826558_18826874
ES.30170.23	chr7	+	3053	13	Fusion	ENSMUSG00000030410.17_ENSMUSG00000030409.17	novel	2475	12	NA	NA	-1395	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	3.17542648054294	368	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	3799	False	NA	16	True	AATAAA	-19	NA	18816378	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_18816671_18819445_18820003_18820256_18820341_18820432_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826874
ES.30170.24	chr7	+	5712	14	NIC	ENSMUSG00000030409.17	novel	2591	16	NA	NA	-1040	0	intron_retention	FALSE	canonical	1	1	junction_11	5.0920520502878	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCGCAATATCTCTGTT	4154	False	NA	19	True	AATAAA	-22	NA	18816733	18827746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822026_18822112_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826180_18826471_18826558_18826874
ES.30170.25	chr7	+	4084	14	NIC	ENSMUSG00000030409.17	novel	2761	15	NA	NA	-359	0	intron_retention	FALSE	canonical	0	0	junction_11	5.22737446400985	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCGCGCAATATCTCTG	5696	False	NA	17	True	AATAAA	-20	NA	18818275	18827744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826471_18826558_18826874
ES.30170.26	chr7	+	4456	12	NIC	ENSMUSG00000030409.17	novel	2850	15	NA	NA	-284	-1	intron_retention	FALSE	canonical	1	1	junction_7	5.33350550686277	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	5771	False	NA	16	True	AATAAA	-19	NA	18818350	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822175_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826558_18826874
ES.30170.28	chr7	+	3494	13	NIC	ENSMUSG00000030409.17	novel	2850	15	NA	NA	515	-1	intron_retention	FALSE	canonical	1	1	junction_7	5.13903903684553	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	6570	False	NA	16	True	AATAAA	-19	NA	18819149	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822175_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826180_18826342_18826558_18826874
ES.30170.29	chr7	+	2970	13	NIC	ENSMUSG00000030409.17	novel	2850	15	NA	NA	-733	0	intron_retention	FALSE	canonical	1	1	junction_10	5.24603024517905	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCGCAATATCTCTGTT	7112	False	NA	19	True	AATAAA	-22	NA	18819691	18827746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826180_18826342_18826558_18826874
ES.30170.3	chr7	+	2525	5	FSM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-26	-5	-26	5	multi-exon	FALSE	canonical	3	219	junction_3	47.1858029496161	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTCCCTGGGGCAGG	NA	False	NA	19	True	ACTAAA	-19	NA	18810125	18816706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ES.30170.30	chr7	+	5648	10	NIC	ENSMUSG00000030409.17	novel	2761	15	NA	NA	-667	-1	intron_retention	FALSE	canonical	1	1	junction_7	6.0736223860962	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	7178	False	NA	16	True	AATAAA	-19	NA	18819757	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18822190_18822835_18825770_18825863_18826180_18826467_18826558_18826874
ES.30170.31	chr7	+	5573	10	NNC	ENSMUSG00000030409.17	novel	2761	15	NA	NA	-608	0	intron_retention	FALSE	canonical	0	0	junction_2	6.2023492164235	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCGCGCAATATCTCTG	7237	False	NA	17	True	AATAAA	-20	NA	18819816	18827744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18820003_18820256_18820336_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18825770_18825863_18826558_18826874
ES.30170.32	chr7	+	2847	10	NIC	ENSMUSG00000030409.17	novel	2433	11	NA	NA	-107	-1	intron_retention	FALSE	canonical	1	1	junction_7	5.73057642587895	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	7738	False	NA	16	True	AATAAA	-19	NA	18820317	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826180_18826471_18826558_18826874
ES.30170.33	chr7	+	2557	11	NIC	ENSMUSG00000030409.17	novel	2433	11	NA	NA	-99	-1	intron_retention	FALSE	canonical	0	0	junction_7	5.86600375042499	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	7746	False	NA	16	True	AATAAA	-19	NA	18820325	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825579_18825770_18825863_18826180_18826471_18826558_18826874
ES.30170.34	chr7	+	2738	10	NIC	ENSMUSG00000030409.17	novel	2761	15	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1	junction_8	5.83306877706964	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCGCAATATCTCTGTT	7834	False	NA	19	True	AATAAA	-22	NA	18820413	18827746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18826558_18826874
ES.30170.35	chr7	+	4646	8	NIC	ENSMUSG00000030409.17	novel	2475	12	NA	NA	317	-2	intron_retention	FALSE	canonical	1	1	junction_6	6.44600809867342	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCCCGCGCAATATCTC	8162	False	NA	15	True	AATAAA	-18	NA	18820741	18827742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18824966_18825605_18825770_18825863_18826558_18826874
ES.30170.36	chr7	+	1654	7	NIC	ENSMUSG00000030409.17	novel	2850	15	NA	NA	-45	-1	intron_retention	FALSE	canonical	0	0	junction_5	7.21110255092798	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	9485	False	NA	16	True	AATAAA	-19	NA	18822064	18827743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18822175_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826342_18826558_18826874
ES.30170.4	chr7	+	2449	4	FSM	ENSMUSG00000030410.17	ENSMUST00000108479.2	2388	4	-56	-5	-25	5	multi-exon	FALSE	canonical	3	165	junction_3	77.0757203447796	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTCCCTGGGGCAGG	NA	False	NA	19	True	ACTAAA	-19	NA	18810126	18816706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200
ES.30170.5	chr7	+	3132	4	NIC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	-22	0	intron_retention	FALSE	canonical	3	261	junction_3	34.7083083233203	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810129	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18810627_18811979_18812163_18813966_18815919_18816200
ES.30170.6	chr7	+	2349	6	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.436871430638	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810129	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810215_18810380_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ES.30170.7	chr7	+	2342	5	NNC	ENSMUSG00000030410.17	novel	2494	5	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	135.002546272283	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810129	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810281_18810378_18810627_18811979_18812163_18813966_18815227_18816200
ES.30170.8	chr7	+	3210	4	NNC	ENSMUSG00000030410.17	novel	2388	4	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_1	153.787732497318	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18810136	18816700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18810203_18810399_18810627_18811979_18812163_18813966
ES.30170.9	chr7	+	2296	5	FSM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	-13	211	-13	63	multi-exon	FALSE	canonical	3	219	junction_3	47.1858029496161	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTCCCAGCATGTGA	NA	False	NA	NA	False	NA	NA	NA	18810138	18816490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ES.30171.1	chr7	+	3271	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-465	201	-465	-201	multi-exon	FALSE	canonical	2	8	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATTGAGGGTAAGGGT	NA	False	NA	9	True	ATTAAA	-20	NA	18828053	18832273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18829344_18830156_18830945_18831080
ES.30171.2	chr7	+	3330	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	-324	1	-324	-1	multi-exon	FALSE	canonical	2	8	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAAGACTGGATTTCTG	NA	False	NA	NA	False	NA	NA	NA	18828194	18832473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18829344_18830156_18830945_18831080
ES.30172.1	chr7	-	2637	14	NNC	ENSMUSG00000085601.8	novel	1892	14	NA	NA	-35	776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.916644252908691	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGGGCCAGAGTTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	18852328	18832194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18833140_18834002_18834093_18834710_18834947_18835081_18835175_18835860_18835914_18836231_18836388_18836828_18836936_18837614_18837709_18838688_18838926_18839645_18839772_18840858_18840971_18845606_18845698_18848335_18848407_18852102
ES.30172.2	chr7	-	2678	14	NNC	ENSMUSG00000085601.8	novel	1892	14	NA	NA	-30	774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	0.916644252908691	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAGGGGCCAGAGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	18852323	18832196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18833140_18834002_18834093_18834710_18834944_18835015_18835175_18835860_18835914_18836231_18836388_18836828_18836900_18837614_18837709_18838667_18838926_18839645_18839772_18840858_18840971_18845606_18845698_18848335_18848407_18852102
ES.30173.1	chr7	+	2958	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	-2	1917	-2	443	multi-exon	FALSE	canonical	3	58	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCTGGCGTGTGTG	9335	False	NA	27	True	TATAAA	-20	NA	18853781	18872180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18853862_18869302
ES.30173.2	chr7	+	2514	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	5	2354	5	6	multi-exon	FALSE	canonical	3	58	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACCAGAGTCTCTAGG	9342	False	NA	18	True	AATAAA	-24	NA	18853788	18871743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18853862_18869302
ES.30173.3	chr7	+	3121	3	NNC	ENSMUSG00000050428.8	novel	4873	2	NA	NA	7	439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCCAGCCTGGCGTG	9344	False	NA	23	True	TATAAA	-16	NA	18853790	18872176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18853862_18867445_18867622_18869302
ES.30173.4	chr7	+	2839	2	NNC	ENSMUSG00000050428.8	novel	4873	2	NA	NA	18	441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCAGCCTGGCGTGTG	9355	False	NA	25	True	TATAAA	-18	NA	18853801	18872178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18853865_18869402
ES.30173.5	chr7	+	2611	3	NNC	ENSMUSG00000050428.8	novel	4873	2	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCTCAAACTACCAGAG	9357	False	NA	10	True	AATAAA	-16	NA	18853803	18871735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18853862_18863693_18863814_18869302
ES.30173.6	chr7	+	2771	3	NNC	ENSMUSG00000050428.8	novel	4873	2	NA	NA	24	443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCTGGCGTGTGTG	9361	False	NA	27	True	TATAAA	-20	NA	18853807	18872180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18853862_18869302_18869347_18869507
ES.30174.1	chr7	-	3993	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	7	-1290	7	1290	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTTGTGAGACATTTAA	7211	False	NA	NA	False	AATAAA	-22	NA	18883209	18872336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.10	chr7	-	1882	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	94	734	94	-734	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTTTCTCTGTGTA	7298	False	NA	NA	False	NA	NA	NA	18883122	18874360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.11	chr7	-	1473	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	75	1162	75	-1162	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTGATGTCAGTTCAT	7279	False	NA	NA	False	AATGAA	-13	NA	18883141	18874788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.2	chr7	-	4996	7	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	94	1290	intron_retention	FALSE	non_canonical	0	0	junction_1	18.8738502225228	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTTGTGAGACATTTAA	7298	False	NA	NA	False	AATAAA	-22	NA	18883122	18872336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18873739_18873872_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18882445_18882900
ES.30174.3	chr7	-	3886	8	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	-22	1288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.4741792017683	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTTGTGAGACATTT	7182	False	NA	NA	False	AATAAA	-20	NA	18883238	18872338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18873746_18873879_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.4	chr7	-	3954	7	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	80	1288	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	17.0855689594074	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTTGTGAGACATTT	7284	False	NA	NA	False	AATAAA	-20	NA	18883136	18872338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881113_18882300_18882445_18882900
ES.30174.6	chr7	-	2572	8	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	42	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.4741792017683	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATG	7246	False	NA	NA	False	ATTAAA	-28	NA	18883174	18873588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18873739_18873872_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.7	chr7	-	2890	8	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	-468	38	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_7	16.8098610515206	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAATAAAATG	6736	False	NA	NA	False	ATTAAA	-28	NA	18883684	18873588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900_18883123_18883448
ES.30174.8	chr7	-	2058	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	44	608	44	-608	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTGGCCTGGAACT	7248	False	NA	NA	False	NA	NA	NA	18883172	18874234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ES.30174.9	chr7	-	2080	7	NNC	ENSMUSG00000030407.3	novel	2710	7	NA	NA	56	-610	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	17.0855689594074	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGCTGGCCTGGAA	7260	False	NA	NA	False	NA	NA	NA	18883160	18874236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881113_18882300_18882445_18882900
ES.30175.1	chr7	+	541	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	72	807	-65	-807	multi-exon	FALSE	canonical	3	3249	junction_1	86	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGTCTTCTCTGCTC	NA	False	NA	10	True	AATAAA	-28	NA	18883718	18886660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18883820_18885142_18885323_18886400
ES.30175.2	chr7	+	1832	2	NIC	ENSMUSG00000040824.4	novel	1420	3	NA	NA	-42	-816	intron_retention	FALSE	canonical	3	3421	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	1	True	AATAAA	-19	NA	18883741	18886651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18885323_18886400
ES.30175.3	chr7	+	845	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	97	478	-40	-478	multi-exon	FALSE	canonical	3	3249	junction_1	86	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGGATGTGTCTGT	NA	False	NA	NA	False	TATAAA	-14	NA	18883743	18886989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18883820_18885142_18885323_18886400
ES.30175.4	chr7	+	1563	2	ISM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	119	816	-18	-816	intron_retention	FALSE	canonical	3	3249	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	1	True	AATAAA	-19	NA	18883765	18886651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18883820_18885142
ES.30175.5	chr7	+	504	3	NNC	ENSMUSG00000040824.4	novel	1420	3	NA	NA	4	-816	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1708	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	1	True	AATAAA	-19	NA	18883787	18886651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18883861_18885142_18885323_18886400
ES.30176.1	chr7	+	3235	21	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	2219	-224	2219	-1	3prime_fragment	FALSE	canonical	3	14	junction_1	46.9870992933167	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18912564	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.10	chr7	+	3139	16	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-2	0	intron_retention	FALSE	canonical	2	3	junction_12	37.3003425661958	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18915126	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.11	chr7	+	2354	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915126	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.12	chr7	+	2270	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	33.4490583749803	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915140	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18915211_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.13	chr7	+	2330	19	Fusion	ENSMUSG00000040811.16_ENSMUSG00000065543.3	novel	593	5	NA	NA	-46	-1	multi-exon	FALSE	canonical	3	11	junction_1	34.4726139291918	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915343	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.14	chr7	+	1841	17	NNC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	37.6297235407065	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915527	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936955_18940301
ES.30176.16	chr7	+	2201	18	ISM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	538	1	102	-1	3prime_fragment	FALSE	canonical	3	114	junction_7	15.6768844443771	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915632	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.17	chr7	+	1842	13	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	5083	2004	4681	-1782	internal_fragment	FALSE	canonical	3	114	junction_3	12.6051136007927	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGATCTGAGAGGCCA	NA	False	NA	NA	False	NA	NA	NA	18920211	18938400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826
ES.30176.18	chr7	+	1379	10	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	14991	0	14589	0	3prime_fragment	FALSE	canonical	3	125	junction_4	11.9721899973786	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	4121	False	NA	22	True	AATACA	-14	NA	18930119	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.19	chr7	+	2433	2	NNC	ENSMUSG00000040811.16	novel	2275	19	NA	NA	22335	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18937865	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18939032_18939137
ES.30176.2	chr7	+	2715	22	NNC	ENSMUSG00000040811.16	novel	593	5	NA	NA	-2196	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.2636023741211	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18912898	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18912968_18913151_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.4	chr7	+	2428	20	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	3104	-222	-1645	0	3prime_fragment	FALSE	canonical	3	19	junction_1	40.167516264774	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18913449	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.5	chr7	+	2278	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	-24	1	-24	-1	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915070	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.6	chr7	+	2152	18	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	40.905748701333	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGAGTCTGGTCTAT	NA	False	NA	24	True	AATACA	-16	NA	18915098	18940406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ES.30176.7	chr7	+	2056	17	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	42.6085012057453	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTCTGGTCT	NA	False	NA	22	True	AATACA	-14	NA	18915104	18940404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18936901_18936998_18937826_18937958_18940010
ES.30176.8	chr7	+	3660	17	NNC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_3	42.1275963591563	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTCTGGTCTA	NA	False	NA	23	True	AATACA	-15	NA	18915107	18940405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18915149_18915633_18915663_18916194_18916325_18918720_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18936522_18936901_18937958_18940010
ES.30177.1	chr7	-	210	1	Intergenic	novelGene_24949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGAGAGGAGAGGGGA	2172	False	NA	NA	False	NA	NA	NA	18923609	18923399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_18923400_18923600
ES.30178.1	chr7	+	2093	2	FSM	ENSMUSG00000044317.8	ENSMUST00000060225.6	2882	2	-40	829	-40	-829	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTCTCTGTCATCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	18946422	18957270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18946560_18955314
ES.30178.2	chr7	+	2131	3	NNC	ENSMUSG00000044317.8	novel	2882	2	NA	NA	6	-848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAATGAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	18946468	18957251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_18946560_18947923_18948027_18955314
ES.30179.1	chr7	+	3520	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	-142	-12	-142	12	multi-exon	FALSE	canonical	3	147	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATTTGTGTGTGCTT	3091	False	NA	21	True	AATAAA	-26	NA	18962116	18981805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18978678
ES.30179.2	chr7	+	2202	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	-37	1201	-37	-1201	multi-exon	FALSE	canonical	3	147	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACCAAGCCAGACAGTG	3196	False	NA	NA	False	NA	NA	NA	18962221	18980592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18978678
ES.30179.3	chr7	+	1414	2	FSM	ENSMUSG00000052214.10	ENSMUST00000161711.2	1390	2	-27	3	22	-3	multi-exon	FALSE	canonical	2	18	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGAGTGTCTCAAACC	3255	False	NA	NA	False	ATTAAA	-11	NA	18962280	18990465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18989280
ES.30179.4	chr7	+	1646	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	28	1692	-21	-1692	multi-exon	FALSE	canonical	3	147	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATCTCTGAAGACCCT	3261	False	NA	NA	False	NA	NA	NA	18962286	18980101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18978678
ES.30179.5	chr7	+	3974	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	50	-658	1	658	multi-exon	FALSE	canonical	3	147	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAACAAAA	3283	False	NA	NA	False	NA	NA	NA	18962308	18982451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18978678
ES.30179.6	chr7	+	3750	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	59	-443	10	443	multi-exon	FALSE	canonical	3	147	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGGAAA	3292	False	NA	NA	False	NA	NA	NA	18962317	18982236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962510_18978678
ES.30179.7	chr7	+	8708	1	FSM	ENSMUSG00000052214.10	ENSMUST00000206335.2	730	1	19	-7997	19	7997	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3301	False	NA	NA	False	NA	NA	NA	18962326	18971034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18962300_18971000
ES.30179.8	chr7	+	4473	1	FSM	ENSMUSG00000064580.3	ENSMUST00000082646.3	160	1	34	-4347	34	4347	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	18976088	18980561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_18976100_18980600
ES.30179.9	chr7	+	2472	1	NIC	ENSMUSG00000052214.10	novel	1390	2	NA	NA	25689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGTCTCAAACCATT	475	False	NA	NA	False	ATTAAA	-14	NA	18987996	18990468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_18988000_18990500
ES.3018.1	chr10	-	5582	1	Intergenic	novelGene_2351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTCCTAGATTATCAG	3771	False	NA	NA	False	GATAAA	-30	NA	67908881	67903299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67903300_67908900
ES.3018.2	chr10	-	188	1	Intergenic	novelGene_2352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTAAAGGAATAACTGT	5813	False	NA	NA	False	NA	NA	NA	67906839	67906651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67906700_67906800
ES.30180.1	chr7	+	1068	1	Antisense	novelGene_ENSMUSG00000030403.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGATTTTGGCATCATT	2988	False	NA	NA	False	NA	NA	NA	18995422	18996490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_18995400_18996500
ES.30181.1	chr7	-	2114	1	Antisense	novelGene_ENSMUSG00000052214.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAAGAGCATATGTGAC	NA	False	NA	NA	False	NA	NA	NA	18962550	18960436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_18960400_18962600
ES.30181.2	chr7	-	1868	1	Antisense	novelGene_ENSMUSG00000052214.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGCAAAGTGTAGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	18962582	18960714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_18960700_18962600
ES.30182.1	chr7	-	4852	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	4	2644	at_least_one_novel_splicesite	TRUE	canonical	3	243	junction_7	341.113250988583	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATAGTCCTCTGTTTA	NA	False	NA	NA	False	AGTAAA	-4	NA	19005738	18988209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.11	chr7	-	3095	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1236	junction_8	122.662474476215	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005742	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.12	chr7	-	2322	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1236	junction_8	113.43276306049	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005742	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.14	chr7	-	2343	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-740	-3	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_13	477.16317777554	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19006482	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438_19005656_19006261
ES.30182.18	chr7	-	2298	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	141	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	634.940802347122	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005601	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998359_18998496_18998578_18998751_19002147_19002408_19005438
ES.30182.2	chr7	-	2989	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	-774	0	-774	0	multi-exon	FALSE	canonical	3	1236	junction_9	117.461666323765	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19006516	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.20	chr7	-	2228	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	539.814628676672	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005738	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995015_18995100_18995135_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.21	chr7	-	2213	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	405.765831141833	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005773	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998359_18998496_18998578_18998751_19005438
ES.30182.27	chr7	-	3364	10	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	1236	junction_6	108.449453436231	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTCTGGAGTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	19005760	18990857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.3	chr7	-	4670	11	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_8	110.633132469437	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18998496_18998578_18998751_19005438
ES.30182.30	chr7	-	3200	11	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	4	-4	intron_retention	FALSE	canonical	3	1236	junction_7	118.766998783332	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTCTGGAGTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	19005738	18990857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.32	chr7	-	2470	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	511.512688766594	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTCTCTGGAGTACT	NA	False	NA	NA	False	AATAAA	-19	NA	19005742	18990858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19002147_19002408_19005438
ES.30182.34	chr7	-	2149	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-69	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	389.859419360242	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTCTCTGGAGTACT	NA	False	NA	NA	False	AATAAA	-19	NA	19005811	18990858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438_19005656_19005785
ES.30182.35	chr7	-	2202	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	538.324638732676	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAAGGTCTCTGGAGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	19005728	18990859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991855_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995982_18998329_18998496_18998578_18998751_19005438
ES.30182.37	chr7	-	2348	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-9	intron_retention	FALSE	canonical	3	1236	junction_8	111.514221010611	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAAGGTCTCTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	19005742	18990862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.39	chr7	-	2330	12	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-9	intron_retention	FALSE	non_canonical	0	0	junction_2	422.52855544364	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAAGGTCTCTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	19005742	18990862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991859_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.4	chr7	-	3310	11	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_7	124.308849242522	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18992819_18992898_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.41	chr7	-	2159	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	480.270892494553	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAAGGTCTCTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	19005742	18990862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438_19005482_19005525
ES.30182.43	chr7	-	2120	11	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	431.668958809873	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAAGGTCTCTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	19005742	18990862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.44	chr7	-	1529	9	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	482.286205872613	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCAAAGGTCTCTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	19005738	18990863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994842_19005500
ES.30182.45	chr7	-	1363	9	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	205	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	482.286205872613	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCAAAGGTCTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	19005537	18990864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994816_19005438
ES.30182.46	chr7	-	2090	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-625	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	510.809521117124	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCAAAGGTCTCTGG	3153	False	NA	NA	False	AATAAA	-13	NA	19001096	18990864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19000292_19000450_19001063
ES.30182.47	chr7	-	2086	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	402.652688430116	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCAAAGGTCTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	19005742	18990864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991562_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.48	chr7	-	2777	12	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-11	intron_retention	FALSE	canonical	3	55	junction_1	407.167904529985	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCAAAGGTCTCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	19005742	18990864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18990997_18991448_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.49	chr7	-	2165	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-1260	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	510.809521117124	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATGCAAAGGTCTCTG	2518	False	NA	NA	False	AATAAA	-12	NA	19001731	18990865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19000292_19000450_19001622
ES.30182.5	chr7	-	3356	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-400	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	404.657742899958	1148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19006142	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18991986_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.51	chr7	-	1990	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	14	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	540.388048586898	1145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCAGTTTTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	19005728	18991030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995135_18995899_18995985_18998359_18998496_18998578_18998751_19005438
ES.30182.52	chr7	-	2088	13	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-53	-177	at_least_one_novel_splicesite	FALSE	canonical	3	243	junction_7	341.113250988583	1145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCAGTTTTGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	19005795	18991030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994604_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.6	chr7	-	2822	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	-457	0	intron_retention	FALSE	canonical	3	1236	junction_8	122.049779845482	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19006199	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.7	chr7	-	3240	11	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_7	116.725489932576	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.8	chr7	-	3532	9	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_5	107.046718772693	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_18991680_18991786_18993191_18993340_18993393_18994505_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30182.9	chr7	-	1760	14	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	375.855017370848	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCTGGAGTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	19005742	18990856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_18990997_18991448_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ES.30183.1	chr7	+	195	1	Intergenic	novelGene_24950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGACCCAAGTTCAAT	2622	False	NA	NA	False	NA	NA	NA	19006990	19007185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19007000_19007200
ES.30184.1	chr7	+	1136	1	Antisense	novelGene_ENSMUSG00000030402.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTACAGGTATAACACAT	8734	False	NA	2	True	AATAAA	-20	NA	19013102	19014238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_19013100_19014200
ES.30184.2	chr7	+	1007	1	Antisense	novelGene_ENSMUSG00000030402.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATATACATAT	8761	False	NA	NA	False	NA	NA	NA	19013129	19014136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_19013100_19014100
ES.30185.1	chr7	-	2033	2	NNC	ENSMUSG00000030402.6	novel	820	2	NA	NA	20	-1	intron_retention	TRUE	canonical	3	13	junction_1	0	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTTCTTCGTTGTTG	NA	False	NA	0	True	AATAAA	-16	NA	19013506	19010730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19011132_19011874
ES.30185.2	chr7	-	2245	4	ISM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	121	1	121	-1	intron_retention	FALSE	canonical	3	13	junction_1	6.12825877028341	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTTCTTCGTTGTTG	9676	False	NA	0	True	AATAAA	-16	NA	19013868	19010730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194
ES.30185.3	chr7	-	1210	5	NNC	ENSMUSG00000030402.6	novel	1648	5	NA	NA	117	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.779030568655	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCCCTTTCTTCGTTGTT	NA	False	NA	-1	True	AATAAA	-15	NA	19013409	19010731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19012887
ES.30186.1	chr7	+	182	1	Intergenic	novelGene_24951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAAAACGA	NA	False	NA	NA	False	NA	NA	NA	19015886	19016068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19015900_19016100
ES.30187.1	chr7	+	2515	8	NIC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	51	junction_4	8.10139821643304	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCATTCTGTGTTTT	NA	False	NA	8	True	AATAAA	-16	NA	19016544	19030081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027667_19027772_19027843_19028343_19028391_19029375
ES.30187.2	chr7	+	1966	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	24	0	13	0	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	NA	False	NA	12	True	AATAAA	-20	NA	19016572	19030085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ES.30187.3	chr7	+	1962	10	NNC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	23.2187663563573	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	False	NA	4	True	AATAAA	-12	NA	19016581	19030077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027759_19027843_19028343_19028391_19029375_19029435_19029640
ES.30187.4	chr7	+	5538	10	NNC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	25	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.8626485392334	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	False	NA	4	True	AATAAA	-12	NA	19016584	19030077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19019705_19019778_19020505_19020610_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ES.30187.5	chr7	+	2152	9	ISM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	36	8	25	-8	intron_retention	FALSE	canonical	3	51	junction_4	8.0583807306431	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	False	NA	4	True	AATAAA	-12	NA	19016584	19030077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375
ES.30187.6	chr7	+	2268	9	NIC	ENSMUSG00000030401.17	novel	1990	10	NA	NA	29	-1	intron_retention	FALSE	canonical	3	51	junction_4	11.6397755562554	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATTCTGTGTTTTAAA	NA	False	NA	11	True	AATAAA	-19	NA	19016588	19030084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ES.30187.8	chr7	+	1070	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	5	1	5	-1	multi-exon	FALSE	canonical	1	1	junction_1	28.3279406632784	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATTCTGTGTTTTAAA	585	False	NA	11	True	AATAAA	-19	NA	19024998	19030084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ES.30188.10	chr7	+	3082	9	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	13	0	intron_retention	TRUE	non_canonical	0	0	junction_4	153.737397857515	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1053	False	NA	15	True	AATAAA	-20	NA	19079044	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19085214_19085423_19086631_19088255_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.11	chr7	+	1153	9	NIC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	315	junction_8	41.9843720924822	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1053	False	NA	15	True	AATAAA	-20	NA	19079044	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089287_19090343
ES.30188.12	chr7	+	956	9	NIC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_5	119.72337908696	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1053	False	NA	15	True	AATAAA	-20	NA	19079044	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.13	chr7	+	949	9	NIC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	122.429507778966	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1065	False	NA	15	True	AATAAA	-20	NA	19079056	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089217_19089287_19090343
ES.30188.14	chr7	+	3126	9	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	360	0	intron_retention	TRUE	canonical	0	0	junction_1	166.196231906743	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTGGCTCTGCGTGTT	1453	False	NA	14	True	AATAAA	-19	NA	19079444	19090448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079643_19080247_19080284_19082325_19082542_19084085_19085155_19085364_19086631_19088255_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.15	chr7	+	1039	9	ISM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	743	2	361	0	3prime_fragment	FALSE	canonical	3	315	junction_8	39.8959584419274	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTGGCTCTGCGTGT	1454	False	NA	13	True	AATAAA	-18	NA	19079445	19090447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.2	chr7	+	1086	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	290	-1	-33	1	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGGCTCTGCGTGTTTG	1001	False	NA	16	True	AATAAA	-21	NA	19078992	19090450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.3	chr7	+	3743	9	NIC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	315	junction_8	14.4633156641207	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1026	False	NA	15	True	AATAAA	-20	NA	19079017	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19079122_19079530_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.4	chr7	+	1049	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.043307380085	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCAGTGGCTCTGCG	1026	False	NA	10	True	AATAAA	-15	NA	19079017	19090444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084184_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.5	chr7	+	2684	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	117.195942288498	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTGGCTCTGCGTGT	1026	False	NA	13	True	AATAAA	-18	NA	19079017	19090447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19085155_19085364_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ES.30188.7	chr7	+	4032	8	NNC	ENSMUSG00000003549.10	novel	1179	8	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_4	166.934302120594	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGTGGCTCTGCGTGT	1034	False	NA	13	True	AATAAA	-18	NA	19079025	19090447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19085139_19085350_19086631_19088250_19088351_19089025_19089520_19089766
ES.30188.8	chr7	+	1324	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	164.147630029935	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084466_19084617_19084718_19086553_19086631_19088255_19088351_19089025_19089105_19089217_19089287_19090343
ES.30188.9	chr7	+	3457	8	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_5	131.112196851648	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1050	False	NA	15	True	AATAAA	-20	NA	19079041	19090449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19085155_19085364_19086631_19088250_19089287_19090343
ES.30189.1	chr7	+	3641	14	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-255	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.0986775809039	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGTCCGTGTTGGT	442	False	NA	NA	False	AATGAA	-28	NA	19093418	19112492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.12	chr7	+	3403	13	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_2	18.3075576379447	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACATCATTTTGATT	730	False	NA	NA	False	AATAAA	-15	NA	19093706	19112458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.13	chr7	+	4355	13	FSM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	-1225	0	221	0	multi-exon	FALSE	canonical	3	31	junction_4	11.000946928939	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACATCATTTTGATT	939	False	NA	NA	False	AATAAA	-15	NA	19093915	19112458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.16	chr7	+	3399	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	239	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.7753909712274	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	957	False	NA	NA	False	AATAAA	-18	NA	19093933	19112461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093978_19094728_19094762_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.17	chr7	+	4047	14	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	240	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.3411728671055	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATTTTGATTCTGTTCA	958	False	NA	NA	False	AATAAA	-22	NA	19093934	19112465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19094660_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105568_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.18	chr7	+	4124	14	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	248	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5729556203445	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	966	False	NA	NA	False	AATAAA	-18	NA	19093942	19112461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19094762_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.19	chr7	+	4106	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	257	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.3396614353843	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGCTGTCCGTGTTG	975	False	NA	NA	False	AATGAA	-26	NA	19093951	19112490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19094660_19094783_19094848_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.2	chr7	+	3685	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-243	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	18.3915741577495	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	454	False	NA	NA	False	AATAAA	-18	NA	19093430	19112461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094589_19094660_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.20	chr7	+	3348	12	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-144	0	intron_retention	FALSE	canonical	2	9	junction_1	16.0855152747089	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACATCATTTTGATT	270	False	NA	NA	False	AATAAA	-15	NA	19094996	19112458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19095242_19102470_19102548_19102641_19102785_19103718_19104230_19104313_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.21	chr7	+	3070	12	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.3402190925746	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAACATCATTTTGA	391	False	NA	NA	False	AATAAA	-13	NA	19095117	19112456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19095242_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.22	chr7	+	2891	8	ISM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	46	4142	46	-4142	5prime_fragment	FALSE	canonical	3	31	junction_4	9.13392420751187	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTTTTA	460	False	NA	NA	False	NA	NA	NA	19095186	19108316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848
ES.30189.3	chr7	+	3404	14	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	12.7483610734546	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATCATTTTGATTCTG	665	False	NA	NA	False	AATAAA	-18	NA	19093641	19112461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19093724_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.4	chr7	+	3407	15	NIC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.9778775619552	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCATTTTGATTCTGTT	697	False	NA	NA	False	AATAAA	-20	NA	19093673	19112463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19093724_19094728_19094762_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.5	chr7	+	3077	13	NIC	ENSMUSG00000040734.15	novel	720	6	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.6656839349313	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAACATCATTTTGA	697	False	NA	NA	False	AATAAA	-13	NA	19093673	19112456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19093724_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.6	chr7	+	3394	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.3407725124601	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGATTCTGTTCAGA	697	False	NA	NA	False	AATAAA	-24	NA	19093673	19112467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094728_19094762_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.7	chr7	+	3545	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	17.6750718036818	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCATTTTGATTCTGTT	698	False	NA	NA	False	AATAAA	-20	NA	19093674	19112463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094589_19094762_19094951_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.8	chr7	+	6929	8	NIC	ENSMUSG00000040734.15	novel	720	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	21.4323806138168	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACATCATTTTGATT	698	False	NA	NA	False	AATAAA	-15	NA	19093674	19112458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19093724_19102466_19102548_19102641_19102785_19103718_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.30189.9	chr7	+	3468	15	NNC	ENSMUSG00000040734.15	novel	3130	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.6311371200596	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAACATCATTTTGA	698	False	NA	NA	False	AATAAA	-13	NA	19093674	19112456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19093724_19094728_19094848_19094951_19095242_19102483_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ES.3019.1	chr10	+	4217	1	Antisense	novelGene_ENSMUSG00000019947.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGAGTTTAGGGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	67959116	67963333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_67959100_67963300
ES.30190.1	chr7	-	433	3	NNC	ENSMUSG00000047649.10	novel	489	2	NA	NA	18	2693	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	107	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAACGATTTCACAGGCC	2176	False	NA	NA	False	NA	NA	NA	19093388	19087245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19087461_19093014_19093157_19093312
ES.30190.10	chr7	-	1888	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	-470	821	-468	-821	multi-exon	FALSE	canonical	3	228	junction_1	10	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGGACAGAAAGCAATG	1688	False	NA	NA	False	NA	NA	NA	19093876	19090759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19091942_19093014_19093157_19093312
ES.30190.11	chr7	-	2640	1	NIC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	1	-827	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAGAGGACAGAAA	2159	False	NA	NA	False	NA	NA	NA	19093405	19090765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19090800_19093400
ES.30190.12	chr7	-	2470	2	FSM	ENSMUSG00000047649.10	ENSMUST00000176333.2	489	2	17	-1998	15	-827	multi-exon	FALSE	canonical	3	248	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAGAGGACAGAAA	2173	False	NA	NA	False	NA	NA	NA	19093391	19090765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19093157_19093312
ES.30190.13	chr7	-	1000	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	32	1207	32	-1207	multi-exon	FALSE	canonical	3	228	junction_1	10	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGGAAAAGAGACAGAA	2190	False	NA	6	True	NA	NA	NA	19093374	19091145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19091942_19093014_19093157_19093312
ES.30190.2	chr7	-	3320	2	FSM	ENSMUSG00000047649.10	ENSMUST00000176333.2	489	2	1	-2832	1	7	multi-exon	FALSE	canonical	3	248	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTTTTGATACATG	2157	False	NA	-12	True	NA	NA	NA	19093407	19089931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19093157_19093312
ES.30190.3	chr7	-	2218	3	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	41	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	113	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTCTTACTTTTGA	2199	False	NA	-18	True	NA	NA	NA	19093365	19089937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19091942_19093014_19093157_19093293
ES.30190.4	chr7	-	2145	4	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.490987293304	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGTCTTACTTTTGA	2215	False	NA	-18	True	NA	NA	NA	19093349	19089937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19090087_19090124_19091942_19093014_19093157_19093312
ES.30190.5	chr7	-	2212	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	13	14	13	-14	multi-exon	FALSE	canonical	3	228	junction_1	10	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAAACCAACAAA	2171	False	NA	-33	True	NA	NA	NA	19093393	19089952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19091942_19093014_19093157_19093312
ES.30190.6	chr7	-	2386	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	-487	340	-485	-340	multi-exon	FALSE	canonical	3	228	junction_1	10	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCCTCTTATTCTCCT	1671	False	NA	-2	True	ATTAAA	-31	NA	19093893	19090278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19091942_19093014_19093157_19093312
ES.30190.7	chr7	-	1874	3	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	41	-343	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	113	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTCTGCCTCTTATTCT	2199	False	NA	-5	True	ATTAAA	-28	NA	19093365	19090281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19091942_19093014_19093157_19093293
ES.30190.8	chr7	-	2925	2	FSM	ENSMUSG00000047649.10	ENSMUST00000176333.2	489	2	36	-2472	34	-353	multi-exon	FALSE	canonical	3	248	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGAATGGGGTTCTGC	2192	False	NA	-15	True	ATTAAA	-18	NA	19093372	19090291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19093157_19093312
ES.30190.9	chr7	-	1537	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	22	680	22	-680	multi-exon	FALSE	canonical	3	228	junction_1	10	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAGATGTCTTCCACG	2180	False	NA	NA	False	AAAAAG	-38	NA	19093384	19090618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19091942_19093014_19093157_19093312
ES.30191.1	chr7	-	205	1	Intergenic	novelGene_24952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATCTGAGTACATC	NA	False	NA	NA	False	NA	NA	NA	19100204	19099999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19100000_19100200
ES.30192.1	chr7	-	183	1	Intergenic	novelGene_24953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGACAGAGTTCA	4401	False	NA	NA	False	NA	NA	NA	19113979	19113796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19113800_19114000
ES.30193.1	chr7	+	3600	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-36	-2	intron_retention	TRUE	canonical	1	5	junction_20	35.3751149868178	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115898	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127710_19127845_19127963_19128108_19128276
ES.30193.10	chr7	+	3570	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_13	37.293296984847	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115945	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.11	chr7	+	4099	21	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_10	46.7078954781737	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115945	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121520_19121604_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.12	chr7	+	3537	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	5	0	intron_retention	FALSE	canonical	1	4	junction_11	35.0704426891538	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115947	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121397_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.13	chr7	+	3536	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	5	-2	intron_retention	FALSE	canonical	2	2	junction_1	35.7154028396713	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115947	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.14	chr7	+	4309	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	5	1	intron_retention	FALSE	canonical	3	10	junction_17	35.9934369017464	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGCTTCTGATATT	NA	False	NA	14	True	AATAAA	-22	NA	19115947	19129620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127498_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.15	chr7	+	3647	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	5	0	intron_retention	FALSE	canonical	3	88	junction_1	20.561174693142	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115947	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.16	chr7	+	3098	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	13	467	5	441	multi-exon	FALSE	canonical	3	88	junction_1	20.1272809394744	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTTACCTGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	19115947	19129152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.17	chr7	+	3558	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_9	35.5283613865024	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115947	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121044_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.18	chr7	+	3415	24	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	6	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	35.4766623680812	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGGGTTTGCTTCTGA	NA	False	NA	10	True	AATAAA	-18	NA	19115948	19129616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276_19128986_19129131
ES.30193.19	chr7	+	3501	22	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_19	36.9588850437005	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAACTGGGGTTTGCTTCT	NA	False	NA	8	True	AATAAA	-16	NA	19115951	19129614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127684_19127845_19127963_19128108_19128276
ES.30193.2	chr7	+	3578	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	5	-5	-3	5	multi-exon	FALSE	canonical	3	88	junction_1	20.1272809394744	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTCTGATATTTTTG	NA	False	NA	18	True	AATAAA	-26	NA	19115939	19129624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.20	chr7	+	3487	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-3	0	intron_retention	FALSE	canonical	1	3	junction_18	36.3901758440267	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115952	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.21	chr7	+	3658	22	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-3	0	intron_retention	FALSE	canonical	1	4	junction_11	35.7932460470552	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115952	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121397_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.22	chr7	+	3541	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	10	junction_18	35.1688508848719	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115952	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127498_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.23	chr7	+	3631	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_1	20.5989674575562	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115954	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.25	chr7	+	3524	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	1	-2	intron_retention	FALSE	canonical	2	2	junction_1	35.6953778520413	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115956	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.26	chr7	+	3451	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	35.77757850899	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115956	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121318_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.27	chr7	+	3767	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_10	16.2438894843024	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115964	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.28	chr7	+	2879	12	NNC	ENSMUSG00000030400.18	novel	3485	22	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	44.039426362978	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115967	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116274_19121333_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127845_19127963_19128108_19128276
ES.30193.29	chr7	+	3580	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	34.567696189285	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115967	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19116022_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.3	chr7	+	1286	12	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	1819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.5505615291254	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGAGCGTTGGGCCCG	NA	False	NA	NA	False	AAGAAA	-15	NA	19115941	19121637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121520_19121604
ES.30193.30	chr7	+	3591	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	3	-2	intron_retention	FALSE	canonical	2	2	junction_9	35.2042611057241	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115967	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.31	chr7	+	3953	20	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	25	-2	intron_retention	FALSE	canonical	3	111	junction_10	17.0383305855144	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19115989	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.32	chr7	+	4017	21	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_10	46.9881900055748	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	NA	False	NA	9	True	AATAAA	-17	NA	19116145	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121520_19121604_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.33	chr7	+	3428	21	ISM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	1932	2	1673	0	3prime_fragment	FALSE	canonical	3	111	junction_9	16.5767910042927	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19117866	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.34	chr7	+	4357	9	NNC	ENSMUSG00000030400.18	novel	2071	20	NA	NA	-1753	-2	intron_retention	FALSE	canonical	0	0	junction_2	47.0450249760801	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	491	False	NA	9	True	AATAAA	-17	NA	19120374	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19120756_19120856_19121520_19121604_19122184_19124031_19124426_19125451_19125516_19125889_19126012_19127173_19127845_19127963_19128108_19128276
ES.30193.35	chr7	+	3566	14	NNC	ENSMUSG00000030400.18	novel	2071	20	NA	NA	-1396	-4	intron_retention	FALSE	canonical	0	0	junction_3	41.3245202795067	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAACTGGGGTTTGCTTC	848	False	NA	7	True	AATAAA	-15	NA	19120731	19129613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19120954_19121037_19121172_19121253_19121520_19121604_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.36	chr7	+	3072	12	NIC	ENSMUSG00000030400.18	novel	2071	20	NA	NA	-1237	-2	intron_retention	FALSE	canonical	3	111	junction_3	15.8421970260305	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	1007	False	NA	9	True	AATAAA	-17	NA	19120890	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124426_19125451_19125516_19125889_19126012_19127173_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.37	chr7	+	4058	9	NIC	ENSMUSG00000030400.18	novel	2799	16	NA	NA	285	-2	intron_retention	FALSE	canonical	3	118	junction_3	14.3085420291517	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACTGGGGTTTGCTTCTG	2529	False	NA	9	True	AATAAA	-17	NA	19122412	19129615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.38	chr7	+	2064	6	NIC	ENSMUSG00000030400.18	novel	2799	16	NA	NA	-1466	0	intron_retention	FALSE	canonical	3	143	junction_5	2.92574776766556	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	6005	False	NA	11	True	AATAAA	-19	NA	19125888	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19126012_19127173_19127267_19127357_19127431_19127554_19127845_19127963_19128108_19128276
ES.30193.4	chr7	+	3786	21	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	88	junction_1	21.0173142908413	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115941	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.5	chr7	+	4128	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_11	35.77757850899	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115941	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121520_19121604_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.6	chr7	+	3492	22	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	45.7330814534624	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115941	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119524_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.7	chr7	+	4416	20	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_11	38.279551979131	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGGTTTGCTTCTGAT	NA	False	NA	11	True	AATAAA	-19	NA	19115941	19129617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121520_19121604_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127845_19127963_19128108_19128276
ES.30193.8	chr7	+	3468	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	2	junction_1	34.8788639062727	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGGGTTTGCTTCTGA	NA	False	NA	10	True	AATAAA	-18	NA	19115941	19129616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ES.30193.9	chr7	+	3561	23	NNC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_19	36.1532550573205	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115941	19129619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127564_19127626_19127700_19127845_19127963_19128108_19128276
ES.30194.1	chr7	-	1822	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	32	-5	-11	2	multi-exon	TRUE	canonical	3	11	junction_12	5.52959210872636	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGATCTGCTCAATTCG	6364	False	NA	NA	False	NA	NA	NA	19133814	19128359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
ES.30194.2	chr7	-	1907	12	NIC	ENSMUSG00000040714.15	novel	1823	13	NA	NA	2	1	intron_retention	FALSE	canonical	2	9	junction_11	6.24962808810808	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCGATCTGCTCAATTC	2151	False	NA	NA	False	NA	NA	NA	19138027	19128360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ES.30194.3	chr7	-	1899	12	NIC	ENSMUSG00000040714.15	novel	1849	13	NA	NA	29	-1	intron_retention	FALSE	canonical	3	11	junction_11	5.64222569061196	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTGCGATCTGCTC	6404	False	NA	NA	False	NA	NA	NA	19133774	19128365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
ES.30194.4	chr7	-	1837	13	FSM	ENSMUSG00000040714.15	ENSMUST00000047170.10	1901	13	63	1	63	-1	multi-exon	FALSE	canonical	2	2	junction_12	7.70641868113126	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGTGCGATCTGCTC	6438	False	NA	NA	False	NA	NA	NA	19133740	19128365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133638
ES.30194.5	chr7	-	1824	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	-7	6	-7	-3	multi-exon	FALSE	canonical	2	9	junction_12	5.99247212944893	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTGTGCGATCTGC	2142	False	NA	NA	False	NA	NA	NA	19138036	19128367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ES.30194.6	chr7	-	2096	11	NIC	ENSMUSG00000040714.15	novel	1823	13	NA	NA	20	-22	intron_retention	FALSE	canonical	2	9	junction_10	6.08687111741328	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTGTTTGCCGAGGGC	2169	False	NA	NA	False	ATTAAA	-15	NA	19138009	19128447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19128647_19128809_19128874_19128985_19129205_19129289_19129381_19129724_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ES.30194.7	chr7	-	2119	11	NIC	ENSMUSG00000040714.15	novel	1823	13	NA	NA	11	-22	intron_retention	FALSE	canonical	2	9	junction_10	6.10655385630881	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTGTTTGCCGAGGGC	2160	False	NA	NA	False	ATTAAA	-15	NA	19138018	19128447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129381_19129724_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ES.30194.8	chr7	-	1701	13	NIC	ENSMUSG00000040714.15	novel	1823	13	NA	NA	-19	-22	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	8.21414768690107	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTGTTTGCCGAGGGC	2451	False	NA	NA	False	ATTAAA	-15	NA	19137727	19128447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137679
ES.30195.1	chr7	-	2930	2	NNC	ENSMUSG00000030397.12	novel	1324	2	NA	NA	967	376	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAAAGAG	8260	False	NA	NA	False	NA	NA	NA	19161410	19158323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19161209_19161365
ES.30195.10	chr7	-	3655	18	NNC	ENSMUSG00000030397.12	novel	3561	18	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.5559405751334	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGACGTACAGAGTCC	NA	False	NA	-7	True	NA	NA	NA	19192742	19159030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168775_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19190881_19191025_19192368
ES.30195.12	chr7	-	3514	17	NNC	ENSMUSG00000030397.12	novel	3561	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	34.2634553861691	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAGAGACGTACAGAGT	NA	False	NA	-9	True	AATAAA	-44	NA	19192716	19159032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167249_19167462_19168481_19168639_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.13	chr7	-	3222	18	NNC	ENSMUSG00000030397.12	novel	3966	18	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8012097031385	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAAGAGACGTACAGAG	NA	False	NA	-10	True	AATAAA	-43	NA	19192758	19159033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19159795_19160136_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.14	chr7	-	3656	17	NNC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.5329983228432	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAAGAGACGTACAGAG	NA	False	NA	-10	True	AATAAA	-43	NA	19192677	19159033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168923_19170765_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.15	chr7	-	3241	7	NNC	ENSMUSG00000030397.12	novel	3966	18	NA	NA	-6261	-33	intron_retention	FALSE	canonical	0	0	junction_1	46.917184721829	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCCGACTCCACGCTA	1032	False	NA	-42	True	AATAAA	-11	NA	19168638	19159065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161505_19161606_19161998_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481
ES.30195.16	chr7	-	3321	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	-40	605	-40	87	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGGTTCTGCTTGCT	NA	False	NA	80	True	NA	NA	NA	19192786	19159304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.17	chr7	-	3368	18	NNC	ENSMUSG00000030397.12	novel	3561	18	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	33.0436431547912	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGACCTCCTCCCTGGCC	NA	False	NA	-5	True	AATAAA	-19	NA	19192775	19159389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19190881_19191025_19192368
ES.30195.18	chr7	-	3272	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	2	692	2	0	multi-exon	FALSE	canonical	2	4	junction_2	31.7309188501163	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGACCTCCTCCCTGG	NA	False	NA	-7	True	AATAAA	-17	NA	19192744	19159391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.2	chr7	-	3599	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	-36	323	-36	4	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAGAGTCCGTCTGTGG	NA	False	NA	1	True	NA	NA	NA	19192782	19159022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.20	chr7	-	3165	17	NNC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.3150978527537	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCCGACCTCCTCCCT	NA	False	NA	-9	True	AATAAA	-15	NA	19192758	19159393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168775_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.22	chr7	-	2321	13	NNC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	-12	-7325	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.8352600512328	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATAAGGAGTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	19192758	19166716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19167462_19168481_19168642_19168775_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.23	chr7	-	2351	13	ISM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	-7	8021	-7	-7329	5prime_fragment	FALSE	canonical	3	72	junction_12	12.5507303904328	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGTATAAGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	19192753	19166720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.3	chr7	-	3680	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	-37	323	-37	4	multi-exon	TRUE	canonical	2	4	junction_2	31.7309188501163	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAGAGTCCGTCTGTGG	NA	False	NA	1	True	NA	NA	NA	19192783	19159022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.4	chr7	-	3668	18	NNC	ENSMUSG00000030397.12	novel	3966	18	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	37.279640908914	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACGTACAGAGTCCGT	NA	False	NA	-5	True	NA	NA	NA	19192753	19159028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182505_19182584_19185480_19185682_19192368
ES.30195.5	chr7	-	3472	18	NNC	ENSMUSG00000030397.12	novel	3561	18	NA	NA	202	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	33.0436431547912	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACGTACAGAGTCCGT	NA	False	NA	-5	True	NA	NA	NA	19192518	19159028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19190881_19191025_19192368
ES.30195.7	chr7	-	3566	17	NNC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	26.3515150181161	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACGTACAGAGTCCG	NA	False	NA	-6	True	NA	NA	NA	19192746	19159029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182410_19182529_19182584_19185480_19185682_19192368
ES.30195.8	chr7	-	3457	16	NIC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	26.6799966683323	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACGTACAGAGTCCG	NA	False	NA	-6	True	NA	NA	NA	19192757	19159029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30195.9	chr7	-	3546	17	NNC	ENSMUSG00000030397.12	novel	3886	17	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.3150978527537	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGACGTACAGAGTCC	NA	False	NA	-7	True	NA	NA	NA	19192776	19159030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168775_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ES.30196.1	chr7	+	4095	12	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-171	0	intron_retention	TRUE	canonical	1	4	junction_6	3.17010832257504	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATTCCCACTGCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	19197084	19230687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19197279_19203392_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
ES.30196.2	chr7	+	2815	12	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-55	-1162	intron_retention	FALSE	canonical	1	4	junction_6	3.17010832257504	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGAAGGGCTGAGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19197200	19229523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19197279_19203392_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
ES.30196.3	chr7	+	4028	11	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	6397	0	intron_retention	FALSE	canonical	0	0	junction_3	3.97617907041421	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATTCCCACTGCTCTT	1274	False	NA	NA	False	AATAAA	-19	NA	19203652	19230687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19203930_19207852_19208448_19212233_19212346_19213325_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
ES.30196.4	chr7	+	3336	9	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-11321	0	intron_retention	FALSE	canonical	0	0	junction_2	4.47213595499958	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAGATTCCCACTGCTC	9281	False	NA	NA	False	AATAAA	-17	NA	19211659	19230685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19212346_19213712_19213810_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
ES.30196.5	chr7	+	180	1	Intergenic	novelGene_24954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	695	False	NA	NA	False	NA	NA	NA	19213274	19213454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19213300_19213500
ES.30197.1	chr7	-	173	1	Intergenic	novelGene_24955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAACAAA	907	False	NA	NA	False	NA	NA	NA	19227082	19226909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19226900_19227100
ES.30198.1	chr7	+	173	1	Intergenic	novelGene_24956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAC	4999	False	NA	NA	False	NA	NA	NA	19233964	19234137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19234000_19234100
ES.30199.1	chr7	+	1137	2	NNC	ENSMUSG00000002043.18	novel	955	4	NA	NA	-1099	538	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGCTTTCTGTGAGCC	NA	False	NA	NA	False	AATAAA	-7	NA	19241220	19243379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19241419_19242440
ES.30199.10	chr7	+	890	5	ISM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	5256	7	-452	0	3prime_fragment	FALSE	canonical	3	438	junction_1	55.8183437590189	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	5763	False	NA	14	True	AGTAAA	-15	NA	19247892	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ES.30199.11	chr7	+	722	4	ISM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	5577	7	-131	0	3prime_fragment	FALSE	canonical	3	530	junction_1	22.2261107708929	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	6084	False	NA	14	True	AGTAAA	-15	NA	19248213	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19248465_19248931_19249016_19249128_19249223_19249770
ES.30199.12	chr7	+	1545	2	ISM	ENSMUSG00000002043.18	ENSMUST00000129808.2	955	4	5749	-818	59	0	3prime_fragment	FALSE	canonical	3	563	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACAGACCTGTGCAGTG	6274	False	NA	12	True	AGTAAA	-13	NA	19248403	19250061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_19249016_19249128
ES.30199.2	chr7	+	1979	2	NNC	ENSMUSG00000002043.18	novel	955	4	NA	NA	-1041	546	intron_retention	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGCCTGCACAGA	NA	False	NA	NA	False	AATAAA	-15	NA	19241278	19243387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19242311_19242440
ES.30199.3	chr7	+	2406	5	NNC	ENSMUSG00000002043.18	novel	734	5	NA	NA	-1040	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	263.434408344848	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCTGTGCAGTGCTTA	NA	False	NA	16	True	AGTAAA	-17	NA	19241279	19250065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19242311_19242440_19242758_19248346_19249016_19249128_19249223_19249770
ES.30199.4	chr7	+	789	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	-6	2	-4	2	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTGCAGTGCTTATCA	501	False	NA	19	True	AGTAAA	-20	NA	19242630	19250068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ES.30199.5	chr7	+	751	6	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	193.692126840509	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	516	False	NA	14	True	AGTAAA	-15	NA	19242645	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248949_19249016_19249128_19249223_19249770
ES.30199.6	chr7	+	697	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	15	7	-1	0	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	520	False	NA	14	True	AGTAAA	-15	NA	19242649	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ES.30199.7	chr7	+	1113	5	NIC	ENSMUSG00000002043.18	novel	651	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	5	junction_4	211.59690451422	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	523	False	NA	14	True	AGTAAA	-15	NA	19242652	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19242758_19248125_19248194_19248346_19249016_19249128_19249223_19249886
ES.30199.8	chr7	+	968	7	NNC	ENSMUSG00000002043.18	novel	785	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	250.387477500152	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	527	False	NA	14	True	AGTAAA	-15	NA	19242656	19250063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19242758_19243277_19243488_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ES.30199.9	chr7	+	903	2	NNC	ENSMUSG00000002043.18	novel	435	2	NA	NA	46	1275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	571	False	NA	NA	False	NA	NA	NA	19242700	19244116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19243581_19244093
ES.302.1	chr1	+	1885	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	36971714	36973599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_36971700_36973600
ES.3020.1	chr10	+	1166	1	Intergenic	novelGene_2359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	68063670	68064836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_68063700_68064800
ES.30200.1	chr7	-	1878	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	5	1305	5	-1305	multi-exon	FALSE	canonical	3	24	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATCAGCTGATATGCTA	NA	False	NA	NA	False	NA	NA	NA	19242287	19239715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19241536_19242229
ES.30200.2	chr7	-	1909	2	NNC	ENSMUSG00000057667.8	novel	3188	2	NA	NA	94	-1328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTACCCTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	19242198	19239738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19241536_19242086
ES.30200.3	chr7	-	2489	1	NIC	ENSMUSG00000057667.8	novel	3188	2	NA	NA	65	-1328	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTACCCTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	19242227	19239738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19239700_19242200
ES.30200.4	chr7	-	1197	2	NNC	ENSMUSG00000057667.8	novel	3188	2	NA	NA	1	-1982	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCTCTTTCTGGATG	NA	False	NA	NA	False	AATACA	-13	NA	19242291	19240392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19241536_19242237
ES.30200.5	chr7	-	1178	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	26	1984	26	-1984	multi-exon	FALSE	canonical	3	24	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCTCTTTCTGGA	NA	False	NA	NA	False	AATACA	-11	NA	19242266	19240394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19241536_19242229
ES.30200.6	chr7	-	915	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	13	2260	13	-2260	multi-exon	FALSE	canonical	3	24	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGAGGTTTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	19242279	19240670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19241536_19242229
ES.30201.1	chr7	-	3253	1	Antisense	novelGene_ENSMUSG00000002043.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGCCTAGTGCCACTG	9811	False	NA	NA	False	NA	NA	NA	19250881	19247628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_19247600_19250900
ES.30202.1	chr7	+	4178	1	Intergenic	novelGene_24957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGCTAACAGAAGAGG	2792	False	NA	NA	False	NA	NA	NA	19285449	19289627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19285400_19289600
ES.30202.2	chr7	+	3915	1	Intergenic	novelGene_24958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCACATGGTAGTCTCC	2796	False	NA	NA	False	NA	NA	NA	19285453	19289368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19285500_19289400
ES.30203.1	chr7	-	3202	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	615	-1	615	1	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCCTCTGTTTCCTGCT	8129	False	NA	-5	True	AATAAA	-16	NA	19296386	19264723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.11	chr7	-	3655	9	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	655	-1	intron_retention	FALSE	canonical	3	100	junction_5	8.70344759276461	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8169	False	NA	-7	True	AATAAA	-14	NA	19296346	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.12	chr7	-	3029	12	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	891	-1	intron_retention	FALSE	canonical	1	1	junction_3	35.7867882727136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8405	False	NA	-7	True	AATAAA	-14	NA	19296110	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265519_19265708_19265878_19265997_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.13	chr7	-	2809	12	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	894	-1	intron_retention	FALSE	canonical	0	0	junction_5	45.3460523398666	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8408	False	NA	-7	True	AATAAA	-14	NA	19296107	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265519_19265708_19265878_19265997_19266739_19266842_19266985_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.14	chr7	-	2615	12	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	870	-1	intron_retention	FALSE	canonical	0	0	junction_3	36.0516158897831	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8384	False	NA	-7	True	AATAAA	-14	NA	19296131	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265519_19265708_19266017_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.16	chr7	-	3221	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	888	-1	intron_retention	FALSE	canonical	3	93	junction_2	10.7280007457121	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8402	False	NA	-7	True	AATAAA	-14	NA	19296113	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.17	chr7	-	2756	14	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	889	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9815473769247	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8403	False	NA	-7	True	AATAAA	-14	NA	19296112	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19264764_19264933_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.18	chr7	-	3150	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	855	-1	intron_retention	FALSE	canonical	3	79	junction_3	13.5475898255979	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8369	False	NA	-7	True	AATAAA	-14	NA	19296146	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.19	chr7	-	3037	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	856	-3	intron_retention	FALSE	canonical	3	79	junction_3	17.7102482354704	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGTGCCTCTGTTTCC	8370	False	NA	-9	True	AATAAA	-12	NA	19296145	19264727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.2	chr7	-	3436	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	605	0	intron_retention	FALSE	canonical	3	100	junction_7	14.6574213284602	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8119	False	NA	-6	True	AATAAA	-15	NA	19296396	19264724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19265519_19265708_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.20	chr7	-	3108	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	889	-3	intron_retention	FALSE	canonical	3	93	junction_2	15.6272198423136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCAGTGCCTCTGTTTCC	8403	False	NA	-9	True	AATAAA	-12	NA	19296112	19264727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.21	chr7	-	3200	13	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	618	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.3157168504051	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCAGTGCCTCTGTTTC	8132	False	NA	-10	True	AATAAA	-11	NA	19296383	19264728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265525_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.22	chr7	-	3244	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	879	-4	intron_retention	FALSE	canonical	3	79	junction_2	13.4182711255959	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCAGTGCCTCTGTTTC	8393	False	NA	-10	True	AATAAA	-11	NA	19296122	19264728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.23	chr7	-	2764	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	885	167	885	102	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCAGTGTAGTTCTGG	8399	False	NA	NA	False	AATAAA	-20	NA	19296116	19264891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.24	chr7	-	2761	13	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	886	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.2620152887242	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCAGTGTAGTTCTGG	8400	False	NA	NA	False	AATAAA	-20	NA	19296115	19264891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265519_19265708_19266443_19266565_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.25	chr7	-	3876	10	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	900	100	intron_retention	FALSE	canonical	3	100	junction_6	15.4488403016753	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCAGCAGTGTAGTTCT	8414	False	NA	NA	False	AATAAA	-18	NA	19296101	19264893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19265519_19265708_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.3	chr7	-	4243	9	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	851	0	intron_retention	FALSE	canonical	3	93	junction_1	10.0591997693654	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8365	False	NA	-6	True	AATAAA	-15	NA	19296150	19264724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19266451_19266571_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.4	chr7	-	3289	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	647	-1	intron_retention	FALSE	canonical	3	79	junction_3	17.4933281260491	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8161	False	NA	-7	True	AATAAA	-14	NA	19296354	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19265519_19265708_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.5	chr7	-	5487	3	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	831	-1	intron_retention	FALSE	canonical	3	106	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8345	False	NA	-7	True	AATAAA	-14	NA	19296170	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19269680_19271294_19271393_19295735
ES.30203.6	chr7	-	3260	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	659	-1	intron_retention	FALSE	canonical	3	93	junction_3	15.4117053292952	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8173	False	NA	-7	True	AATAAA	-14	NA	19296342	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.7	chr7	-	3333	10	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	856	-1	intron_retention	FALSE	canonical	3	93	junction_1	9.7916568163859	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8370	False	NA	-7	True	AATAAA	-14	NA	19296145	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.8	chr7	-	3036	14	NNC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	659	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	33.7505643170003	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8173	False	NA	-7	True	AATAAA	-14	NA	19296342	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19265352_19265431_19265519_19265708_19265878_19265997_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30203.9	chr7	-	3583	10	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	647	-1	intron_retention	FALSE	canonical	3	100	junction_6	9.62378740156999	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	8161	False	NA	-7	True	AATAAA	-14	NA	19296354	19264725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19265352_19265431_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ES.30204.1	chr7	+	1595	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	-66	1	-66	-1	multi-exon	FALSE	canonical	3	235	junction_1	5.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGGACTTTCTTGGGG	661	False	NA	25	True	AATAAA	-20	NA	19311145	19314580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_19311554_19311741_19311886_19313537
ES.30204.2	chr7	+	1593	3	NNC	ENSMUSG00000011267.9	novel	1530	3	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	121.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATGCCTGGACTTTC	720	False	NA	19	True	AATAAA	-14	NA	19311204	19314574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19311554_19311678_19311886_19313537
ES.30205.1	chr7	-	981	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-44	180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.5	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTCTGGCTTTCCT	2858	False	NA	NA	False	AAGAAA	-15	NA	19307354	19298690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19298811_19298861_19299602_19307233
ES.30205.10	chr7	-	1129	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-364	-2	116	-1	multi-exon	FALSE	canonical	3	225	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	2580	False	NA	-7	True	AATAAA	-21	NA	19307632	19298871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19299602_19307233
ES.30205.11	chr7	-	1436	2	FSM	ENSMUSG00000044709.7	ENSMUST00000208826.2	613	2	-443	-380	-443	-1	multi-exon	FALSE	canonical	2	11	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	8082	False	NA	-7	True	AATAAA	-21	NA	19311963	19298871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19299602_19311257
ES.30205.12	chr7	-	793	2	NNC	ENSMUSG00000044709.7	novel	763	2	NA	NA	-230	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	2234	False	NA	-7	True	AATAAA	-21	NA	19307978	19298871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19299602_19307915
ES.30205.13	chr7	-	2790	3	NNC	ENSMUSG00000044709.7	novel	763	2	NA	NA	-415	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTGCTGTGTGTGTGT	2049	False	NA	-9	True	AATAAA	-19	NA	19308163	19298873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19300469_19300648_19301680_19307999
ES.30205.14	chr7	-	3087	17	NNC	ENSMUSG00000061028.8	novel	2431	20	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_3	65.5027432631642	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19329405	19314962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316267_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383
ES.30205.15	chr7	-	2340	18	NNC	ENSMUSG00000061028.8	novel	2162	17	NA	NA	1122	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	95.99808965804	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19337208	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316267_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.16	chr7	-	2481	20	FSM	ENSMUSG00000061028.8	ENSMUST00000207907.2	2431	20	-46	-4	1	-1	multi-exon	FALSE	canonical	2	2	junction_19	60.3945476433225	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338376	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ES.30205.17	chr7	-	2177	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	-1	4	-1	-1	multi-exon	FALSE	canonical	3	161	junction_6	32.5501152071694	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338412	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.19	chr7	-	3099	8	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	95.7002121849523	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338387	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316904_19326637_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.2	chr7	-	1521	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-143	180	intron_retention	TRUE	non_canonical	0	0	junction_1	112.5	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTCTGGCTTTCCT	2321	False	NA	NA	False	AAGAAA	-15	NA	19307891	19298690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19298802_19298849_19299602_19307233
ES.30205.20	chr7	-	3216	19	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_1	75.6416176518433	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338344	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.21	chr7	-	4804	18	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_1	81.0917716696704	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338406	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19316130_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.22	chr7	-	3464	19	NIC	ENSMUSG00000061028.8	novel	2431	20	NA	NA	21	-1	intron_retention	FALSE	canonical	3	13	junction_13	59.1014246449418	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338356	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.23	chr7	-	2127	21	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	90.6777122560996	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338378	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.24	chr7	-	2551	20	NNC	ENSMUSG00000061028.8	novel	2431	20	NA	NA	23	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	94.9256306076519	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338354	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328329_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ES.30205.25	chr7	-	2157	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.5312455816188	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338395	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.26	chr7	-	2452	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	190	junction_19	27.1360581324836	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338434	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.28	chr7	-	2152	21	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.3441256254348	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338363	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.29	chr7	-	4846	19	NIC	ENSMUSG00000061028.8	novel	2431	20	NA	NA	-16	-1	intron_retention	FALSE	canonical	2	2	junction_18	62.0252835742743	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	19338346	19314963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ES.30205.30	chr7	-	2025	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.4235293806012	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338356	19314965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19337114_19337231_19338336
ES.30205.31	chr7	-	3184	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	60.2165988840572	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338331	19314965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.32	chr7	-	3223	18	NNC	ENSMUSG00000061028.8	novel	2162	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	83.0712371993279	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACATGCTGTCCCCTT	NA	False	NA	-7	True	AATAAA	-23	NA	19338388	19314965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328329_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.33	chr7	-	3160	18	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_1	62.5668915398153	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACATGCTGTCCCCT	NA	False	NA	-8	True	AATAAA	-22	NA	19338394	19314966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.34	chr7	-	3229	19	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.9612588813719	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACATGCTGTCCCCT	NA	False	NA	-8	True	AATAAA	-22	NA	19338336	19314966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.35	chr7	-	2466	20	NIC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_15	61.7387490170793	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACATGCTGTCCCCT	NA	False	NA	-8	True	AATAAA	-22	NA	19338383	19314966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328329_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.36	chr7	-	2136	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	59.5613968942972	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCACATGCTGTCCCCT	NA	False	NA	-8	True	AATAAA	-22	NA	19338390	19314966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.37	chr7	-	2410	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_16	79.9176168611436	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338384	19314967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328815_19328934_19329383_19329482_19337114_19337227_19338336
ES.30205.38	chr7	-	4793	18	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	82.6602668951861	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338394	19314967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322677_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.40	chr7	-	2374	19	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	103.905940371301	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338395	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320289_19320536_19320639_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328474_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.41	chr7	-	2452	10	NNC	ENSMUSG00000061028.8	novel	2255	18	NA	NA	-1788	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	84.4445906431483	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	2869	False	NA	-10	True	AATAAA	-20	NA	19324380	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19319273_19320265_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163
ES.30205.42	chr7	-	3268	19	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	3	-1	intron_retention	FALSE	canonical	1	2	junction_10	80.9426904408451	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338381	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322677_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.43	chr7	-	4172	17	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	66.6586160503652	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338383	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.44	chr7	-	2386	19	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	61.170274391536	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338376	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.45	chr7	-	2129	21	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	78.5159060318354	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338369	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.46	chr7	-	2167	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.3496307173386	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338388	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328476_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.47	chr7	-	2206	21	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	62.3500400962181	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338378	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328329_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.49	chr7	-	2119	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.2664274671588	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338374	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.5	chr7	-	3243	24	Fusion	ENSMUSG00000044709.7_ENSMUSG00000061028.8	novel	2162	17	NA	NA	0	179	multi-exon	TRUE	non_canonical	0	0	junction_1	101.157908713427	378	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGCTCTGGCTTTCC	NA	False	NA	NA	False	AAGAAA	-14	NA	19338388	19298691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19298802_19298849_19299602_19311257_19311435_19311781_19311949_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.50	chr7	-	1915	18	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.2840882339771	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338381	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19316133_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19337114_19337231_19338336
ES.30205.51	chr7	-	2365	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_11	78.9722767723899	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338383	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322677_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.52	chr7	-	2389	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	13	junction_13	58.629500104883	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338392	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.53	chr7	-	2040	20	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_18	77.5326577603953	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338394	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19337114_19337231_19338336
ES.30205.54	chr7	-	2932	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	63.6009895565798	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338394	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.55	chr7	-	2191	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.237152370523	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338347	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ES.30205.56	chr7	-	3145	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	82.2661716119679	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338396	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328329_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.57	chr7	-	2014	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1099	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.997448564841	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19337231	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320766_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ES.30205.58	chr7	-	4893	19	NNC	ENSMUSG00000061028.8	novel	2431	20	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	82.6829434393967	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACCACATGCTGTCCC	NA	False	NA	-10	True	AATAAA	-20	NA	19338374	19314968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ES.30205.6	chr7	-	3318	24	Fusion	ENSMUSG00000044709.7_ENSMUSG00000061028.8	novel	2162	17	NA	NA	-6	177	multi-exon	FALSE	non_canonical	0	0	junction_1	107.028236826834	378	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGGCTCTGGCTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	19338394	19298693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19298802_19298849_19299602_19310740_19310805_19311257_19311435_19311781_19311958_19316133_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.60	chr7	-	2622	19	NIC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	0	-2	intron_retention	FALSE	canonical	3	190	junction_18	27.4994949448571	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338388	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.61	chr7	-	2407	19	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_1	61.170274391536	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338394	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19316130_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.62	chr7	-	2302	18	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	81.6801085846995	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338412	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315088_19316138_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329479_19338336
ES.30205.63	chr7	-	5561	18	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	64.7513209441618	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338376	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.64	chr7	-	3245	18	NNC	ENSMUSG00000061028.8	novel	2162	17	NA	NA	22	-2	intron_retention	FALSE	canonical	0	0	junction_1	81.0399107108817	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338355	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.65	chr7	-	5698	18	NIC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	190	junction_17	28.1853725345878	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338394	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.66	chr7	-	4789	19	NIC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	190	junction_18	27.5721276332136	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338382	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.68	chr7	-	2383	20	NNC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	13	junction_7	59.1325100060211	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338395	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320289_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.69	chr7	-	3016	20	NIC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	21	-2	intron_retention	FALSE	canonical	3	34	junction_6	55.0199158099508	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCACCACATGCTGTCC	NA	False	NA	-11	True	AATAAA	-19	NA	19338356	19314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.7	chr7	-	889	3	NNC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-196	177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGGCTCTGGCTTT	2268	False	NA	NA	False	AAGAAA	-12	NA	19307944	19298693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19298802_19298849_19299602_19307915
ES.30205.70	chr7	-	2416	20	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	61.7483948449511	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTCACCACATGCTGT	NA	False	NA	-13	True	AATAAA	-17	NA	19338382	19314971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.71	chr7	-	3925	18	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	64.587163818392	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTCACCACATGCTGT	NA	False	NA	-13	True	AATAAA	-17	NA	19338383	19314971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.72	chr7	-	3004	19	NNC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	92.3952192659874	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTCACCACATGCTGT	NA	False	NA	-13	True	AATAAA	-17	NA	19338388	19314971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315084_19315305_19315331_19316156_19316264_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320289_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.73	chr7	-	3154	19	NIC	ENSMUSG00000061028.8	novel	2151	21	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	34	junction_6	56.4196139609815	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTCACCACATGCT	NA	False	NA	-15	True	AATAAA	-15	NA	19338397	19314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ES.30205.74	chr7	-	4209	14	NNC	ENSMUSG00000061028.8	novel	4545	20	NA	NA	957	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	70.6893361725848	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTCACCACATGCT	NA	False	NA	-15	True	AATAAA	-15	NA	19328418	19314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19315088_19316138_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917
ES.30205.75	chr7	-	2130	12	ISM	ENSMUSG00000061028.8	ENSMUST00000208068.2	2151	21	13332	2269	-2462	827	internal_fragment	FALSE	canonical	3	34	junction_3	64.5404607543219	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAATTTGCCCTTTTGT	2195	False	NA	NA	False	NA	NA	NA	19325054	19317236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014
ES.30205.76	chr7	-	1933	1	Intergenic	novelGene_24959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19333012	19331079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19331100_19333000
ES.30205.8	chr7	-	809	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	-10	-147	-10	6	multi-exon	FALSE	canonical	3	34	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	3309	False	NA	0	True	AATAAA	-28	NA	19306903	19298864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19299602_19306831
ES.30205.9	chr7	-	799	2	NIC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	2451	False	NA	-7	True	AATAAA	-21	NA	19307761	19298871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19299602_19307692
ES.30206.1	chr7	+	181	1	Intergenic	novelGene_24960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAAGTGGATCTTCC	6595	False	NA	6	True	NA	NA	NA	19339677	19339858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19339700_19339900
ES.30207.1	chr7	+	225	1	Intergenic	novelGene_24961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGCTATCTAAGCATG	817	False	NA	NA	False	AATAAA	-26	NA	19343079	19343304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19343100_19343300
ES.30208.1	chr7	-	3543	12	NNC	ENSMUSG00000002983.18	novel	2209	12	NA	NA	8	1560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.2997413635899	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGGAATTCTGGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	19363355	19338581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19338709_19338922_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19363115
ES.30208.11	chr7	-	2223	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-91	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.2697164142789	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGTCTTCTTTCTTC	NA	False	NA	-3	True	AATAAA	-18	NA	19362800	19340143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362532
ES.30208.12	chr7	-	4057	10	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	5	1	intron_retention	FALSE	non_canonical	0	0	junction_8	96.9478668609521	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGGGGTCTTCTTTC	NA	False	NA	-6	True	AATAAA	-15	NA	19362393	19340146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19349655_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362000
ES.30208.13	chr7	-	2170	11	NNC	ENSMUSG00000002983.18	novel	2203	12	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.0473535357132	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	19362180	19340147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349655_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362000
ES.30208.14	chr7	-	3877	10	NNC	ENSMUSG00000002983.18	novel	2203	12	NA	NA	179	0	intron_retention	FALSE	non_canonical	0	0	junction_8	107.031436480418	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	19362180	19340147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19349616_19350270_19350363_19351628_19351845_19353438_19353768_19361842_19361911_19362000
ES.30208.15	chr7	-	2161	10	NNC	ENSMUSG00000002983.18	novel	2203	12	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.332724169709	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	19362373	19340147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349782_19350270_19350363_19351686_19351845_19361842_19361896_19362000
ES.30208.16	chr7	-	3417	11	NNC	ENSMUSG00000002983.18	novel	2203	12	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	98.6379744317573	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	19362268	19340147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19349007_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361840_19361896_19362000
ES.30208.17	chr7	-	2065	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	93.0763664954751	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTTTGGGGGTCTTCT	NA	False	NA	-9	True	AATAAA	-12	NA	19362369	19340149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362253
ES.30208.18	chr7	-	142	1	Intergenic	novelGene_24962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAACA	4726	False	NA	NA	False	NA	NA	NA	19354756	19354614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19354600_19354800
ES.30208.19	chr7	-	1409	1	NIC	ENSMUSG00000002983.18	novel	2209	12	NA	NA	4796	-4393	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAGAAGAAGAAGAAGA	1919	False	NA	NA	False	NA	NA	NA	19357563	19356154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19356200_19357600
ES.30208.2	chr7	-	3539	12	NNC	ENSMUSG00000002983.18	novel	2209	12	NA	NA	-2	1544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.2997413635899	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACAACAAAACGTG	NA	False	NA	NA	False	AATAAA	-6	NA	19363365	19338597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19338702_19338913_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19363115
ES.30208.20	chr7	-	2760	2	Genic_Genomic	ENSMUSG00000002983.18	novel	931	5	NA	NA	14	-7078	multi-exon	FALSE	non_canonical	0	0	junction_1	0	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAACAAATCAA	NA	False	NA	NA	False	NA	NA	NA	19362345	19358839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_19361425_19362170
ES.30208.3	chr7	-	3665	12	NNC	ENSMUSG00000002983.18	novel	2209	12	NA	NA	-17	1544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	94.96584858092	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACAACAAAACGTG	NA	False	NA	NA	False	AATAAA	-6	NA	19362376	19338597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19338702_19338913_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362000
ES.30208.4	chr7	-	3093	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	16	904	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	85.0185862032532	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTGTGTATACATCT	NA	False	NA	NA	False	NA	NA	NA	19363347	19339237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19363115
ES.30208.5	chr7	-	2259	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	85.0185862032532	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19363417	19340141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19363115
ES.30208.6	chr7	-	2342	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	81.6041665602927	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19362385	19340141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361896_19362000
ES.30208.8	chr7	-	2390	11	NNC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	92.3086669820337	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19362418	19340141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361842_19361911_19362000
ES.30209.1	chr7	+	167	1	Intergenic	novelGene_24964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGACAGG	NA	False	NA	NA	False	NA	NA	NA	19381543	19381710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19381500_19381700
ES.3021.1	chr10	+	1520	1	Intergenic	novelGene_2360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAACAACCCTGCTATA	NA	False	NA	NA	False	NA	NA	NA	68074796	68076316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_68074800_68076300
ES.30210.1	chr7	+	177	1	Intergenic	novelGene_24966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGCCGCCATGTAC	9499	False	NA	NA	False	NA	NA	NA	19391527	19391704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19391500_19391700
ES.30211.1	chr7	-	5324	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	0	-1181	0	1181	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGCCTAATGTCTTTC	5148	False	NA	NA	False	NA	NA	NA	19398958	19364314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.11	chr7	-	2584	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	-104	1663	-104	15	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTCTGCCTTCCTTGT	5044	False	NA	-2	True	AATAAA	-36	NA	19399062	19367158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.12	chr7	-	1914	10	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	456.251095043502	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTCTGCCTTCCTTGT	5152	False	NA	-2	True	AATAAA	-36	NA	19398954	19367158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372958_19398921
ES.30211.13	chr7	-	2575	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	543.858761114332	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCTCTGCCTTCCTTG	5161	False	NA	-3	True	AATAAA	-35	NA	19398945	19367159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19397634_19397744_19398858
ES.30211.14	chr7	-	2510	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	2	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	544.02849190093	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTCCTCTGCCTTCCTT	5167	False	NA	-4	True	AATAAA	-34	NA	19398939	19367160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398339_19398391_19398858
ES.30211.16	chr7	-	3810	11	NIC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	0	8	intron_retention	FALSE	canonical	3	1363	junction_4	148.722022579038	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5165	False	NA	-9	True	AATAAA	-29	NA	19398941	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.17	chr7	-	5040	10	NIC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	1	8	intron_retention	FALSE	canonical	3	1372	junction_5	146.420584803917	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5161	False	NA	-9	True	AATAAA	-29	NA	19398945	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.18	chr7	-	3518	12	NIC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	0	8	intron_retention	FALSE	canonical	3	1363	junction_4	141.840091547658	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5160	False	NA	-9	True	AATAAA	-29	NA	19398946	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.19	chr7	-	2598	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	542.670607049158	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5161	False	NA	-9	True	AATAAA	-29	NA	19398945	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19390607_19390746_19398858
ES.30211.2	chr7	-	4152	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	3	-12	0	12	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGAACAGTGTCCAGC	5151	False	NA	NA	False	AAAACA	-29	NA	19398955	19365483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.20	chr7	-	3125	13	FSM	ENSMUSG00000002981.11	ENSMUST00000208846.2	3107	13	-10	-8	-1	8	multi-exon	FALSE	canonical	3	1363	junction_4	142.270477924582	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5150	False	NA	-9	True	AATAAA	-29	NA	19398956	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.21	chr7	-	3407	12	NNC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	-2	8	intron_retention	FALSE	canonical	0	0	junction_8	451.09988632011	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCACCTCCTCTGCCT	5163	False	NA	-9	True	AATAAA	-29	NA	19398943	19367165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19371639_19372041_19372163_19372856_19372943_19376976_19377093_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.22	chr7	-	2662	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	542.333111732663	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCACCTCCTCTGCC	5148	False	NA	-10	True	AATAAA	-28	NA	19398958	19367166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19396069_19396260_19398858
ES.30211.23	chr7	-	2755	13	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	6	intron_retention	FALSE	canonical	3	1363	junction_5	142.10469047697	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5161	False	NA	-11	True	AATAAA	-27	NA	19398945	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.24	chr7	-	3147	13	FSM	ENSMUSG00000002981.11	ENSMUST00000208554.2	4819	13	15	1657	1	6	multi-exon	FALSE	canonical	3	1363	junction_5	138.739464064443	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5166	False	NA	-11	True	AATAAA	-27	NA	19398940	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.25	chr7	-	2564	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	424.417512423876	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5161	False	NA	-11	True	AATAAA	-27	NA	19398945	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371203_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.26	chr7	-	2447	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	425.955188353431	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5161	False	NA	-11	True	AATAAA	-27	NA	19398945	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367991_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.28	chr7	-	2218	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	410.608986501658	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5166	False	NA	-11	True	AATAAA	-27	NA	19398940	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367448_19367682_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.29	chr7	-	2453	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	425.449876757693	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5179	False	NA	-11	True	AATAAA	-27	NA	19398927	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367901_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.3	chr7	-	4120	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	425.449876757693	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGCACCATGTACTGT	5170	False	NA	NA	False	AAAACA	-3	NA	19398936	19365509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367901_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.30	chr7	-	2202	13	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	413.387328462464	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5153	False	NA	-11	True	AATAAA	-27	NA	19398953	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379865_19389721_19389756_19398858
ES.30211.32	chr7	-	3682	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	424.291375822834	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCGCACCTCCTCTGC	5161	False	NA	-11	True	AATAAA	-27	NA	19398945	19367167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19397634
ES.30211.34	chr7	-	2345	13	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	1	17	junction_12	422.315804687545	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACCGCACCTCCTCTG	5160	False	NA	-12	True	AATAAA	-26	NA	19398946	19367168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19398858
ES.30211.35	chr7	-	2384	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	425.324741926301	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACCGCACCTCCTCTG	5172	False	NA	-12	True	AATAAA	-26	NA	19398934	19367168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368877_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.36	chr7	-	2384	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	424.417512423876	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACCGCACCTCCTCTG	5169	False	NA	-12	True	AATAAA	-26	NA	19398937	19367168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371032_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.39	chr7	-	2488	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	425.120546774607	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCACCGCACCTCCTCT	5161	False	NA	-13	True	AATAAA	-25	NA	19398945	19367169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368770_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.40	chr7	-	2549	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	424.993755610235	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCACCGCACCTCCTCT	5161	False	NA	-13	True	AATAAA	-25	NA	19398945	19367169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371732_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.43	chr7	-	2296	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	413.478561366922	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCACCGCACCTCCTCT	5156	False	NA	-13	True	AATAAA	-25	NA	19398950	19367169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379871_19380750_19380765_19389642_19389756_19398858
ES.30211.44	chr7	-	3986	12	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	3	4	intron_retention	FALSE	canonical	3	1370	junction_5	141.216204909088	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCACCGCACCTCCTCT	5154	False	NA	-13	True	AATAAA	-25	NA	19398952	19367169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.45	chr7	-	4240	11	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	4	intron_retention	TRUE	canonical	0	0	junction_1	482.111491254876	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCACCGCACCTCCTCT	5161	False	NA	-13	True	AATAAA	-25	NA	19398945	19367169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19368149_19368634_19368939_19369232_19369329_19369585_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.47	chr7	-	1529	9	NNC	ENSMUSG00000002981.11	novel	4819	13	NA	NA	-478	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	481.680067575979	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	NA	False	NA	-17	True	AATAAA	-21	NA	19372149	19367173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367449_19367671_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041
ES.30211.48	chr7	-	2501	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	424.993755610235	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	5166	False	NA	-17	True	AATAAA	-21	NA	19398940	19367173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19371987_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.49	chr7	-	3148	12	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1363	junction_5	141.910517726215	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	5165	False	NA	-17	True	AATAAA	-21	NA	19398941	19367173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.5	chr7	-	5458	11	NIC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1363	junction_4	148.722022579038	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATGCACCATGTACTG	5172	False	NA	NA	False	AAAACA	-2	NA	19398934	19365510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.50	chr7	-	4142	17	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	663.852287316237	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTCAACCACCGCACCT	5170	False	NA	-18	True	AATAAA	-20	NA	19398936	19367174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19390607_19390746_19396069_19396260_19396365_19396514_19397634
ES.30211.51	chr7	-	2325	14	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	419.080594132797	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTCAACCACCGCACC	5175	False	NA	-19	True	AATAAA	-19	NA	19398931	19367175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377052_19379834_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.52	chr7	-	5134	15	NNC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	543.688967956451	1001	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTCAACCACCGCACC	5160	False	NA	-19	True	AATAAA	-19	NA	19398946	19367175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19396069_19396260_19396365
ES.30211.53	chr7	-	176	1	Intergenic	novelGene_24963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	958	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	19376406	19376230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19376200_19376400
ES.30211.54	chr7	-	2468	1	Intergenic	novelGene_24965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	931	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTATTGACTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	19384358	19381890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19381900_19384400
ES.30211.55	chr7	-	1432	2	FSM	ENSMUSG00000002981.11	ENSMUST00000208594.2	358	2	-4	-1070	1	1070	multi-exon	FALSE	canonical	3	1529	junction_1	0	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	5161	False	NA	NA	False	NA	NA	NA	19398945	19388410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19389756_19398858
ES.30211.56	chr7	-	9676	2	NNC	ENSMUSG00000002981.11	novel	358	2	NA	NA	1	1039	intron_retention	FALSE	canonical	0	0	junction_1	0	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAACCAAAAAAAAAAAA	5161	False	NA	NA	False	NA	NA	NA	19398945	19388441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19388504_19389331
ES.30211.57	chr7	-	1727	1	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	8712	1039	mono-exon	FALSE	NA	NA	NA	NA	NA	935	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAACCAAAAAAAAAAAA	9716	False	NA	NA	False	NA	NA	NA	19390168	19388441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19388400_19390200
ES.30211.58	chr7	-	593	3	NNC	ENSMUSG00000002981.11	novel	358	2	NA	NA	0	1039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	764.5	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAACCAAAAAAAAAAAA	5148	False	NA	NA	False	NA	NA	NA	19398958	19388441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19388499_19389319_19389756_19398858
ES.30211.6	chr7	-	6041	11	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	1372	junction_6	139.352215626448	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGATGCACCATGTACTG	5161	False	NA	NA	False	AAAACA	-2	NA	19398945	19365510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.8	chr7	-	3403	13	NNC	ENSMUSG00000002981.11	novel	3107	13	NA	NA	1	-504	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	441.507895990799	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCTGGTGCCATTTGCT	5161	False	NA	NA	False	AAAACA	-15	NA	19398945	19366014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19367888_19367980_19368112_19369267_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30211.9	chr7	-	2617	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	5	1521	2	157	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTGTAAGTCAGAGCTA	5153	False	NA	NA	False	NA	NA	NA	19398953	19367016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ES.30212.1	chr7	-	621	4	FSM	ENSMUSG00000002992.18	ENSMUST00000003074.16	631	4	9	1	9	-1	multi-exon	FALSE	canonical	1	2	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCGTGTGGCTTCTTTTCA	4256	False	NA	NA	False	AATAAA	-19	NA	19410780	19405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19405774_19407153_19407305_19407471_19407539_19410646
ES.30213.1	chr7	-	613	5	Fusion	ENSMUSG00000040564.15_ENSMUSG00000074336.6	novel	538	3	NA	NA	-8	-12	multi-exon	FALSE	canonical	1	2	junction_2	563.341148860972	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTCACCGGACGCAT	NA	False	NA	-9	True	AATAAA	-15	NA	19426571	19412019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19412238_19412534_19412668_19425812_19425961_19426335_19426412_19426533
ES.30213.2	chr7	-	450	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	-21	3	-21	-3	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCCCTGAAGTGCTT	NA	False	NA	-7	True	AATAAA	-16	NA	19426606	19423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
ES.30213.7	chr7	-	410	4	NNC	ENSMUSG00000040564.15	novel	432	4	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_3	588.548685798852	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCCCTGAAGTGCTT	NA	False	NA	-7	True	AATAAA	-16	NA	19426583	19423408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19423562_19425812_19425961_19426335_19426395_19426533
ES.30213.8	chr7	-	260	3	NIC	ENSMUSG00000040564.15	novel	432	4	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	479	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGCTCCCTGAAGTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	19426565	19423409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19423562_19426335_19426412_19426533
ES.30214.1	chr7	+	1705	1	Antisense	novelGene_ENSMUSG00000002985.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTATTGTGTGTGTG	9899	False	NA	NA	False	AAGAAA	-3	NA	19430063	19431768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_19430100_19431800
ES.30215.1	chr7	+	175	1	Intergenic	novelGene_24969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	9198	False	NA	NA	False	NA	NA	NA	19472498	19472673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19472500_19472700
ES.30216.1	chr7	+	172	1	Intergenic	novelGene_24970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATAGTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	19474111	19474283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19474100_19474300
ES.30217.1	chr7	+	172	1	Intergenic	novelGene_24971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAACAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19487326	19487498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19487300_19487500
ES.30218.1	chr7	+	1248	1	NIC	ENSMUSG00000097226.2	novel	1256	3	NA	NA	3545	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGCTATTGCTTTTGT	740	False	NA	NA	False	NA	NA	NA	19508080	19509328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19508100_19509300
ES.30219.1	chr7	-	4848	1	FSM	ENSMUSG00000002985.17	ENSMUST00000207525.2	897	1	-1167	-2784	-177	2158	mono-exon	FALSE	NA	NA	NA	NA	NA	1996	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATGACTAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	19432723	19427875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19427900_19432700
ES.30219.10	chr7	-	5833	12	Fusion	ENSMUSG00000002984.18_ENSMUSG00000002985.17	novel	1577	10	NA	NA	4	2	intron_retention	FALSE	canonical	3	200	junction_9	3171.08790675955	3132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	9898	False	NA	-28	True	AATAAA	-16	NA	19449346	19430194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19431029_19431403_19431573_19432112_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447832_19448217_19448286_19448905_19449185_19449282
ES.30219.101	chr7	-	2384	16	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	207.079115315862	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3972	False	NA	-13	True	AATAAA	-18	NA	19504412	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19503254_19503278_19504331
ES.30219.102	chr7	-	3700	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-1	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3911	False	NA	-14	True	AATAAA	-17	NA	19504473	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491298_19491616_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.103	chr7	-	2521	14	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-13	-9	intron_retention	FALSE	canonical	3	510	junction_10	41.7940852529419	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3899	False	NA	-14	True	AATAAA	-17	NA	19504485	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.104	chr7	-	2471	14	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	2	-9	intron_retention	FALSE	canonical	3	510	junction_10	51.3757477378315	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3966	False	NA	-14	True	AATAAA	-17	NA	19504418	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.105	chr7	-	3936	13	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	8	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	165.329469040862	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3972	False	NA	-14	True	AATAAA	-17	NA	19504412	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491293_19491558_19492494_19492583_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.106	chr7	-	4440	2	NNC	ENSMUSG00000002980.15	novel	307	2	NA	NA	2	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	0	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3966	False	NA	-14	True	AATAAA	-17	NA	19504418	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491313_19501226
ES.30219.107	chr7	-	3721	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-20	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3944	False	NA	-14	True	AATAAA	-17	NA	19504440	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491323_19491587_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.108	chr7	-	3738	14	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-3	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	161.477094570734	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3961	False	NA	-14	True	AATAAA	-17	NA	19504423	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491293_19491611_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.109	chr7	-	3995	13	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-1	-9	intron_retention	TRUE	non_canonical	0	0	junction_1	165.329469040862	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTTCCTACCGCCAGG	3911	False	NA	-14	True	AATAAA	-17	NA	19504473	19490064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491429_19491696_19492494_19492583_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.11	chr7	-	2822	1	FSM	ENSMUSG00000002985.17	ENSMUST00000207525.2	897	1	-1461	-464	-40	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1996	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19433017	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19430200_19433000
ES.30219.110	chr7	-	2291	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	159.805893099684	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTTCCTACCGCCAG	3912	False	NA	-15	True	AATAAA	-16	NA	19504472	19490065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498635_19499306_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.111	chr7	-	2262	14	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	20	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	165.822711344475	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTTCCTACCGCCAG	3932	False	NA	-15	True	AATAAA	-16	NA	19504452	19490065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.112	chr7	-	2344	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.810717101485	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTTCCTACCGCCAG	3966	False	NA	-15	True	AATAAA	-16	NA	19504418	19490065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492369_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.113	chr7	-	3730	14	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	4	-10	intron_retention	FALSE	non_canonical	0	0	junction_1	161.477094570734	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTTCCTACCGCCAG	3968	False	NA	-15	True	AATAAA	-16	NA	19504416	19490065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491376_19491694_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.114	chr7	-	3650	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-5	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTTTCCTACCGCCAG	3959	False	NA	-15	True	AATAAA	-16	NA	19504425	19490065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491351_19491670_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.12	chr7	-	4840	2	FSM	ENSMUSG00000002985.17_ENSMUSG00000002984.18	ENSMUST00000174191.2	472	2	-3383	-985	1490	1	multi-exon	FALSE	canonical	3	10421	junction_1	0	3108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19435575	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19431573_19432112
ES.30219.13	chr7	-	1102	4	NNC	ENSMUSG00000002985.17	novel	1408	4	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_3	4936.24555935199	1996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19432979	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432945
ES.30219.14	chr7	-	2024	2	NIC	ENSMUSG00000002985.17	novel	514	3	NA	NA	-1	1	intron_retention	FALSE	canonical	3	8700	junction_1	0	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19432976	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19432179_19432935
ES.30219.16	chr7	-	965	5	NNC	ENSMUSG00000002985.17	novel	728	5	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4339.25802989405	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19432976	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19430587_19430730_19431029_19431403_19431573_19432112_19432179_19432935
ES.30219.17	chr7	-	1128	4	FSM	ENSMUSG00000002985.17	ENSMUST00000003066.16	1128	4	1	-1	-1	1	multi-exon	FALSE	canonical	0	0	junction_3	4936.24555935199	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGTCTCTGTGAGTG	NA	False	NA	-29	True	AATAAA	-15	NA	19432976	19430195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19431029_19431403_19431573_19432112_19432198_19432935
ES.30219.18	chr7	-	1511	5	NNC	ENSMUSG00000002985.17	novel	817	5	NA	NA	-122	-1	intron_retention	FALSE	canonical	3	30	junction_4	5193.51332794092	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGAGTCTCTGTGAG	NA	False	NA	-31	True	AATAAA	-13	NA	19433235	19430197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432474_19432935
ES.30219.2	chr7	-	1399	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	-124	133	-124	25	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGCCTCAGTTTATT	NA	False	NA	0	True	AATAAA	-44	NA	19433237	19430166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ES.30219.21	chr7	-	5771	12	Fusion	ENSMUSG00000002984.18_ENSMUSG00000002985.17	novel	1577	10	NA	NA	-514	-1	intron_retention	FALSE	canonical	0	0	junction_11	3172.58862682216	3132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGAGTCTCTGTGAG	9367	False	NA	-31	True	AATAAA	-13	NA	19449877	19430197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19431029_19431403_19431573_19432112_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449727
ES.30219.23	chr7	-	5652	12	Fusion	ENSMUSG00000002984.18_ENSMUSG00000002985.17	novel	1577	10	NA	NA	48	-1	intron_retention	FALSE	canonical	3	56	junction_11	3166.25807513334	3132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGAGTCTCTGTGAG	9942	False	NA	-31	True	AATAAA	-13	NA	19449302	19430197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19431029_19431403_19431573_19432112_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449271
ES.30219.25	chr7	-	1642	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	-58	-7	-58	7	multi-exon	FALSE	canonical	3	2342	junction_9	200.868177398407	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCGGTTTTCTCCAGTT	9823	False	NA	-6	True	NA	NA	NA	19449421	19435230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.26	chr7	-	2167	9	NIC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	12	-5	intron_retention	FALSE	canonical	3	2342	junction_8	206.430035060308	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTGGGAGGCCTCGG	9906	False	NA	-18	True	NA	NA	NA	19449338	19435242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19449185_19449282
ES.30219.27	chr7	-	2183	11	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1225.34642040527	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTGGGAGGCCTCGG	9908	False	NA	-18	True	NA	NA	NA	19449336	19435242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19446086_19446580_19447593_19447832_19448217_19448286_19448905_19449185_19449282
ES.30219.29	chr7	-	1526	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	-1	-34	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	883.01404432157	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9893	False	NA	-63	True	NA	NA	NA	19449351	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449271
ES.30219.3	chr7	-	1207	5	FSM	ENSMUSG00000002985.17	ENSMUST00000172983.8	817	5	-16	-374	-2	21	multi-exon	FALSE	canonical	3	31	junction_4	5193.26072906031	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTTCAGCCTCAGTT	NA	False	NA	-4	True	AATAAA	-40	NA	19432979	19430170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432399_19432935
ES.30219.31	chr7	-	1549	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	0	-34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	900.121720164063	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9881	False	NA	-63	True	NA	NA	NA	19449363	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449260
ES.30219.32	chr7	-	2861	9	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	-5	-34	intron_retention	TRUE	non_canonical	0	0	junction_6	928.19135284703	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9876	False	NA	-63	True	NA	NA	NA	19449368	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19445162_19446579_19447687_19448217_19448286_19448905
ES.30219.34	chr7	-	1518	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	12	-34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	1176.61766763995	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9906	False	NA	-63	True	NA	NA	NA	19449338	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436870_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449260
ES.30219.35	chr7	-	1467	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	21	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	894.190509157118	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9915	False	NA	-63	True	NA	NA	NA	19449329	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437291_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.36	chr7	-	1675	9	NIC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	-22	-34	intron_retention	FALSE	canonical	3	2342	junction_8	206.630558001473	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9859	False	NA	-63	True	NA	NA	NA	19449385	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19435783_19436772_19436876_19436990_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.38	chr7	-	1540	9	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	53	-34	intron_retention	FALSE	canonical	0	0	junction_5	950.668021708946	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9947	False	NA	-63	True	NA	NA	NA	19449297	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444861_19444945_19447593_19447687_19448217_19448286_19448905
ES.30219.4	chr7	-	1514	3	FSM	ENSMUSG00000002985.17	ENSMUST00000174710.2	514	3	-25	-975	-23	2	multi-exon	FALSE	canonical	3	8700	junction_2	860.5	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGTGAGTGATTCCA	NA	False	NA	-23	True	AATAAA	-21	NA	19433000	19430189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19431573_19432112_19432179_19432935
ES.30219.40	chr7	-	1633	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	37	-34	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	1131.17313735196	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9931	False	NA	-63	True	NA	NA	NA	19449313	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447832_19448217_19448286_19448905_19449185_19449271
ES.30219.41	chr7	-	1538	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	-17	-34	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	878.707903826359	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9864	False	NA	-63	True	NA	NA	NA	19449380	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436870_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.42	chr7	-	1769	9	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	-5	-34	intron_retention	FALSE	canonical	3	59	junction_2	1180.93321148996	1159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9876	False	NA	-63	True	NA	NA	NA	19449368	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436870_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447832_19448217_19448286_19448905
ES.30219.45	chr7	-	1681	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	-9	-34	at_least_one_novel_splicesite	FALSE	canonical	3	200	junction_7	831.437710635419	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9872	False	NA	-63	True	NA	NA	NA	19449372	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447832_19448217_19448286_19448905_19449185_19449282
ES.30219.46	chr7	-	1851	7	NIC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	2	-34	intron_retention	FALSE	canonical	3	2733	junction_1	126.40202617926	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9896	False	NA	-63	True	NA	NA	NA	19449348	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19435783_19436772_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
ES.30219.47	chr7	-	1513	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	26	-34	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	897.678418594252	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	9920	False	NA	-63	True	NA	NA	NA	19449324	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435808_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.48	chr7	-	1294	9	NNC	ENSMUSG00000002984.18	novel	1646	9	NA	NA	522	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	943.153810030474	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTTAAAAAA	10000	False	NA	-63	True	NA	NA	NA	19448828	19435287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448701
ES.30219.49	chr7	-	3157	7	NNC	ENSMUSG00000002984.18	novel	2766	4	NA	NA	-5	-2938	intron_retention	FALSE	non_canonical	0	0	junction_1	1488.55563849286	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTAGCAACCAGGGCTG	9876	False	NA	NA	False	NA	NA	NA	19449368	19439840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19440824_19440931_19441121_19441485_19442146_19444243_19444945_19447593_19447687_19448217_19448286_19448905
ES.30219.5	chr7	-	5540	13	Fusion	ENSMUSG00000002984.18_ENSMUSG00000002985.17	novel	1577	10	NA	NA	3	-2	intron_retention	TRUE	canonical	3	139	junction_3	3056.28611316996	3132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTCTGTGAGTGAT	9897	False	NA	-27	True	AATAAA	-17	NA	19449347	19430193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.50	chr7	-	2956	2	NNC	ENSMUSG00000002984.18	novel	2766	4	NA	NA	19	-2938	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTAGCAACCAGGGCTG	9913	False	NA	NA	False	NA	NA	NA	19449331	19439840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19440045_19446579
ES.30219.51	chr7	-	6726	6	NNC	ENSMUSG00000002984.18	novel	2766	4	NA	NA	0	-2950	intron_retention	FALSE	non_canonical	0	0	junction_1	1344.99076576756	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACCCTAG	9891	False	NA	NA	False	NA	NA	NA	19449353	19439852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19440824_19440931_19445162_19446579_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.52	chr7	-	177	1	Intergenic	novelGene_24967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	19440190	19440013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19440000_19440200
ES.30219.53	chr7	-	5863	3	ISM	ENSMUSG00000002984.18	ENSMUST00000173966.2	2766	4	-16	-2983	-6	2983	intron_retention	FALSE	canonical	3	2877	junction_1	22.5	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGCAAATCTACCTGG	9875	False	NA	NA	False	NA	NA	NA	19449369	19442355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19447687_19448217_19448286_19448905
ES.30219.54	chr7	-	3015	6	ISM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	16	7118	3	2983	5prime_fragment	FALSE	canonical	3	2342	junction_5	258.726573818771	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGCAAATCTACCTGG	9897	False	NA	NA	False	NA	NA	NA	19449347	19442355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.55	chr7	-	176	2	Intergenic	novelGene_24968	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2144	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAAAAAAGAATATG	NA	False	NA	NA	False	NA	NA	NA	19509177	19442368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19442449_19509081
ES.30219.56	chr7	-	2723	1	NIC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	14	-1275	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTACTTTTTTGTTTTT	9908	False	NA	NA	False	NA	NA	NA	19449336	19446613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19446600_19449300
ES.30219.57	chr7	-	2747	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	-29	17	-29	-17	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTTTTCTGTGAGA	NA	False	NA	-19	True	GATAAA	-1	NA	19483527	19450585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.58	chr7	-	2701	10	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	49	-17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	378.670807228275	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTTTTCTGTGAGA	NA	False	NA	-19	True	GATAAA	-1	NA	19483409	19450585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463364_19463437_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.59	chr7	-	2512	10	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	56	-20	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	344.572771793896	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTTGTGTTTTCTGTG	NA	False	NA	-22	True	NA	NA	NA	19483402	19450588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472083_19472189_19472300_19483139
ES.30219.6	chr7	-	1139	4	NNC	ENSMUSG00000002985.17	novel	1408	4	NA	NA	80	-2	intron_retention	FALSE	canonical	3	62	junction_3	4907.01948459778	1996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTCTGTGAGTGAT	NA	False	NA	-27	True	AATAAA	-17	NA	19432853	19430193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432784
ES.30219.60	chr7	-	2736	9	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	35	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	378.912898137553	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTTGTGTTTTCTGTG	NA	False	NA	-22	True	NA	NA	NA	19483423	19450588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455273_19455432_19463962_19464204_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.61	chr7	-	2845	10	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	35	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	375.010156241069	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTTGTGTTTTCTGTG	NA	False	NA	-22	True	NA	NA	NA	19483423	19450588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19477373_19477579_19483139
ES.30219.63	chr7	-	2106	6	NIC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	3	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	252.619397513334	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTCTTGTGTTTTCTG	NA	False	NA	-24	True	NA	NA	NA	19483455	19450590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19471936_19472300_19483139
ES.30219.64	chr7	-	2827	10	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	36	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	384.079852808415	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAAGTCTTGTGTTTTCT	NA	False	NA	-25	True	NA	NA	NA	19483422	19450591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19461123_19461315_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.65	chr7	-	2546	10	NNC	ENSMUSG00000062300.15	novel	2735	9	NA	NA	30	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348.55798178591	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAAGTCTTGTGTTTTC	NA	False	NA	-26	True	NA	NA	NA	19483428	19450592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19451498_19451592_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.67	chr7	-	3410	6	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	377.269346753748	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	-4	True	AATAAA	-16	NA	19483455	19458085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19459254_19462963_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.68	chr7	-	2076	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	-124	3	-84	-3	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGGGGTGTTTTGTA	NA	False	NA	-7	True	AATAAA	-13	NA	19483582	19458088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.73	chr7	-	2011	7	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	429.864578158698	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACCTCGGGGTGTTTTG	NA	False	NA	-9	True	AATAAA	-11	NA	19483447	19458090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19458795_19463364_19463437_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.74	chr7	-	1786	7	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	57	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	342.880769688564	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACCTCGGGGTGTTTTG	NA	False	NA	-9	True	AATAAA	-11	NA	19483401	19458090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472083_19472189_19472300_19483139
ES.30219.75	chr7	-	2532	6	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	373.76441778211	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCGGGGTGTTTT	NA	False	NA	-10	True	AATAAA	-10	NA	19483443	19458091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19458795_19463364_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ES.30219.76	chr7	-	2122	7	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	431.851311860408	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCGGGGTGTTTT	NA	False	NA	-10	True	AATAAA	-10	NA	19483426	19458091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19477373_19477579_19483139
ES.30219.77	chr7	-	1668	6	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	1426	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	381.383586432348	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAACCTCGGGGTGTTTT	NA	False	NA	-10	True	AATAAA	-10	NA	19482032	19458091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19481994
ES.30219.79	chr7	-	2098	13	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	169.947459201039	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCGCCAGGTTCTCTT	3911	False	NA	-7	True	AATAAA	-24	NA	19504473	19490057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19499547_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.8	chr7	-	5722	12	Fusion	ENSMUSG00000002984.18_ENSMUSG00000002985.17	novel	1577	10	NA	NA	-17	2	intron_retention	FALSE	canonical	3	2342	junction_11	2971.45680107606	3132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTCTCTGTGAGTGA	9864	False	NA	-28	True	AATAAA	-16	NA	19449380	19430194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19431029_19431403_19431573_19432112_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ES.30219.80	chr7	-	3899	13	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-1	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	165.329469040862	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCGCCAGGTTCTCTT	3963	False	NA	-7	True	AATAAA	-24	NA	19504421	19490057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491299_19491617_19492494_19492583_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.82	chr7	-	3786	14	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	8	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	161.477094570734	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCGCCAGGTTCTCTT	3972	False	NA	-7	True	AATAAA	-24	NA	19504412	19490057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491351_19491617_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.83	chr7	-	2644	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	1330	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	160.44124425204	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCTACCGCCAGGTTC	5294	False	NA	-11	True	AATAAA	-20	NA	19503090	19490061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19502728
ES.30219.84	chr7	-	2159	14	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-14	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	166.356713759973	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCTACCGCCAGGTTC	3950	False	NA	-11	True	AATAAA	-20	NA	19504434	19490061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19502376_19502499_19504331
ES.30219.85	chr7	-	4201	14	ISM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	54	7	2	-7	intron_retention	FALSE	canonical	3	510	junction_11	51.1541353375285	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3966	False	NA	-12	True	AATAAA	-19	NA	19504418	19490062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376
ES.30219.86	chr7	-	3748	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	6	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCCTACCGCCAGGTT	3918	False	NA	-12	True	AATAAA	-19	NA	19504466	19490062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491298_19491563_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.87	chr7	-	2544	14	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-19	-8	intron_retention	FALSE	canonical	3	510	junction_10	49.5822787582812	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3945	False	NA	-13	True	AATAAA	-18	NA	19504439	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.88	chr7	-	3690	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3974	False	NA	-13	True	AATAAA	-18	NA	19504410	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491351_19491617_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.89	chr7	-	2611	13	NIC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	2	-8	intron_retention	FALSE	canonical	3	510	junction_9	40.2584532186168	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3966	False	NA	-13	True	AATAAA	-18	NA	19504418	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19490751_19492348_19492494_19492583_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.90	chr7	-	3646	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	2	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	160.810717101485	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3966	False	NA	-13	True	AATAAA	-18	NA	19504418	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19491376_19491694_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.91	chr7	-	1492	9	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	6088	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	208.34406639019	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	10017	False	NA	-13	True	AATAAA	-18	NA	19498332	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498284
ES.30219.92	chr7	-	1801	11	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	4837	-8	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_8	183.880640634081	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	8801	False	NA	-13	True	AATAAA	-18	NA	19499583	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498113_19498577_19498715_19499258_19499442_19499537
ES.30219.93	chr7	-	3727	14	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	8	-8	intron_retention	TRUE	non_canonical	0	0	junction_1	161.477094570734	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3972	False	NA	-13	True	AATAAA	-18	NA	19504412	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491355_19491674_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.94	chr7	-	3843	14	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-2	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	161.477094570734	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3910	False	NA	-13	True	AATAAA	-18	NA	19504474	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19491298_19491563_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.95	chr7	-	2371	15	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.883926341639	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3920	False	NA	-13	True	AATAAA	-18	NA	19504464	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494072_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ES.30219.98	chr7	-	2414	16	NNC	ENSMUSG00000002980.15	novel	2429	15	NA	NA	-146	-8	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	154.073142803453	460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	3297	False	NA	-13	True	AATAAA	-18	NA	19505087	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331_19504401_19505022
ES.30219.99	chr7	-	531	2	NNC	ENSMUSG00000002980.15	novel	307	2	NA	NA	3773	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTCCTACCGCCAGGT	7737	False	NA	-13	True	AATAAA	-18	NA	19500647	19490063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19490545_19500597
ES.3022.1	chr10	-	7164	8	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	-197	16502	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	49.4525127815378	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGCAGATGTTTACA	NA	False	NA	NA	False	NA	NA	NA	67972653	67911847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67911864_67928357_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.10	chr10	-	6948	7	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	-44440	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.3686186778134	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	9818	False	NA	-9	True	AATAAA	-18	NA	68016896	67928354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68016761
ES.3022.12	chr10	-	7543	10	NNC	ENSMUSG00000019947.11	novel	7581	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.5155997608387	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGGGAGTGTCTGTC	5347	False	NA	-10	True	AATAAA	-17	NA	68114549	67928355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022076_68078833_68079060_68113759_68114015_68114519
ES.3022.13	chr10	-	6853	6	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	1316	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.8837410865354	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTTGGGAGTGTCT	NA	False	NA	-13	True	AATAAA	-14	NA	67971140	67928358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970983
ES.3022.14	chr10	-	6699	11	NNC	ENSMUSG00000019947.11	novel	4202	11	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.1070616773325	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTTTGGGAGTGTCT	5344	False	NA	-13	True	AATAAA	-14	NA	68114552	67928358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67933509_67934363_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ES.3022.15	chr10	-	6657	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	21	903	2	-903	multi-exon	FALSE	canonical	3	31	junction_9	46.8506953451172	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTGTTAAGCTTAAAGT	5347	False	NA	NA	False	NA	NA	NA	68114549	67929252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ES.3022.16	chr10	-	3776	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-92	-659	-92	221	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTGATTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	67972548	67931624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.17	chr10	-	4284	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	21	3276	2	220	multi-exon	FALSE	canonical	3	31	junction_9	46.8506953451172	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCTTTTGATTTGTTTT	5347	False	NA	NA	False	NA	NA	NA	68114549	67931625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ES.3022.18	chr10	-	3632	7	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	411	219	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	52.0032050294338	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCTTTTGATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	67972045	67931626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67971954
ES.3022.19	chr10	-	3690	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-185	-480	-185	42	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATCACTGTTGGCTCACC	NA	False	NA	NA	False	NA	NA	NA	67972641	67931803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.2	chr10	-	6867	7	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	458	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	52.0032050294338	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTCTCTTATTCCTG	NA	False	NA	1	True	AATAAA	-28	NA	67971998	67928344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67971954
ES.3022.20	chr10	-	2689	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	19	317	19	-317	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCTGCAGTACTTGAA	NA	False	NA	NA	False	NA	NA	NA	67972437	67932600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.21	chr10	-	3713	6	ISM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-65	2602	-65	-2602	5prime_fragment	FALSE	canonical	3	87	junction_5	23.2292918531754	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTAGGAAGCATCACAA	NA	False	NA	NA	False	NA	NA	NA	67972521	67934885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.22	chr10	-	3080	1	NIC	ENSMUSG00000019947.11	novel	7581	10	NA	NA	34474	-2619	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	67937982	67934902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67934900_67938000
ES.3022.23	chr10	-	2803	6	ISM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	3	3444	3	-3444	5prime_fragment	FALSE	canonical	3	87	junction_5	23.2292918531754	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67972453	67935727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.24	chr10	-	1883	1	Intergenic	novelGene_2354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCCAGTTCCTCATTA	NA	False	NA	NA	False	AGTAAA	-40	NA	67951171	67949288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67949300_67951200
ES.3022.25	chr10	-	5060	1	Intergenic	novelGene_2355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67995260	67990200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67990200_67995300
ES.3022.26	chr10	-	2201	1	Intergenic	novelGene_2356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTCTTGATCACATCCA	NA	False	NA	NA	False	NA	NA	NA	67998963	67996762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_67996800_67999000
ES.3022.27	chr10	-	3015	1	Intergenic	novelGene_2357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	68015630	68012615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_68012600_68015600
ES.3022.28	chr10	-	7077	1	Intergenic	novelGene_2358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGACTCAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	68055488	68048411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_68048400_68055500
ES.3022.3	chr10	-	7344	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	-381	-3938	-381	4	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTCTCTTATTCCT	NA	False	NA	0	True	AATAAA	-27	NA	67972837	67928345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ES.3022.4	chr10	-	7605	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	-26	2	-26	-2	multi-exon	FALSE	canonical	3	31	junction_9	46.8506953451172	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGAGTGTCTGTCTCTT	5300	False	NA	-6	True	AATAAA	-21	NA	68114596	67928351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ES.3022.6	chr10	-	6867	7	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	412	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	51.6378952148732	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	NA	False	NA	-9	True	AATAAA	-18	NA	67972044	67928354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67971990
ES.3022.7	chr10	-	6937	6	NIC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	-36	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	53.2803903889602	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	NA	False	NA	-9	True	AATAAA	-18	NA	67972492	67928354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_67934500_67937724_67937924_67954080_67954179_67964618_67964824_67970823_67970937_67972315
ES.3022.9	chr10	-	5665	2	NNC	ENSMUSG00000019947.11	novel	3025	7	NA	NA	42472	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGGAGTGTCTGTCT	NA	False	NA	-9	True	AATAAA	-18	NA	68072079	67928354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_67933960_68072019
ES.30220.1	chr7	-	2016	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	5	-359	1	266	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCTGCTGAATCTTC	NA	False	NA	NA	False	NA	NA	NA	19530729	19513283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
ES.30220.2	chr7	-	1653	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	5	4	1	-4	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCTCCCGTGTGTGAC	NA	False	NA	-3	True	AATAAA	-16	NA	19530729	19513646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
ES.30220.3	chr7	-	1565	7	ISM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	4	6057	0	407	5prime_fragment	FALSE	canonical	2	13	junction_3	3.91578004149024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATATAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	19530730	19519699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
ES.30220.4	chr7	-	182	1	Intergenic	novelGene_24972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGGTTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	19525600	19525418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19525400_19525600
ES.30221.1	chr7	+	370	2	Antisense	novelGene_ENSMUSG00000053175.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCAGTCGGGGCGGCGCC	NA	False	NA	NA	False	NA	NA	NA	19554101	19556705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_19554129_19556362
ES.30222.1	chr7	+	3277	1	Intergenic	novelGene_24973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19556839	19560116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19556800_19560100
ES.30223.1	chr7	-	2645	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	2	-797	2	797	multi-exon	TRUE	canonical	3	615	junction_1	42.6314144733669	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATAATAAATATATA	5731	False	NA	NA	False	NA	NA	NA	19556693	19541589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.10	chr7	-	2791	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	615	junction_1	44.9274105888846	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5728	False	NA	-9	True	AATAAA	-16	NA	19556696	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19546439_19553971_19554126_19556361
ES.30223.11	chr7	-	1782	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-101	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	247.870604821737	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5628	False	NA	-9	True	AATAAA	-16	NA	19556796	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543185_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.12	chr7	-	2168	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	678	junction_4	25.3223660470783	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5731	False	NA	-9	True	AATAAA	-16	NA	19556693	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.13	chr7	-	6003	7	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	354.849459473858	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5746	False	NA	-9	True	AATAAA	-16	NA	19556678	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542856_19543385_19543589_19544981_19545060_19545244_19546896_19549775_19552388_19553451_19554126_19556361
ES.30223.14	chr7	-	1619	9	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	104	-1	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	236.220103928518	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5833	False	NA	-9	True	AATAAA	-16	NA	19556591	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542856_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.16	chr7	-	1927	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	678	junction_5	25.6395740039112	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5736	False	NA	-9	True	AATAAA	-16	NA	19556688	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.19	chr7	-	3642	5	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	678	junction_2	22.5222112591104	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5736	False	NA	-9	True	AATAAA	-16	NA	19556688	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19545060_19545244_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.20	chr7	-	3745	5	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	678	junction_2	30.7774267930248	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5731	False	NA	-10	True	AATAAA	-15	NA	19556693	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.21	chr7	-	4536	3	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	703	junction_2	19	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5731	False	NA	-10	True	AATAAA	-15	NA	19556693	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19546439_19553971_19554126_19556361
ES.30223.22	chr7	-	2064	8	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	12	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	246.902194963008	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5741	False	NA	-10	True	AATAAA	-15	NA	19556683	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546431_19553971_19554126_19556361
ES.30223.23	chr7	-	1927	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	7	-2	intron_retention	FALSE	canonical	3	615	junction_1	41.2894214845717	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5736	False	NA	-10	True	AATAAA	-15	NA	19556688	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.25	chr7	-	2601	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	38	-2	intron_retention	FALSE	canonical	3	615	junction_1	43.3845850760638	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	5767	False	NA	-10	True	AATAAA	-15	NA	19556657	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19546439_19553971_19554126_19556361
ES.30223.26	chr7	-	3207	10	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-1555	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	226.181397757106	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCTTGCTTTCCATCTG	4174	False	NA	-10	True	AATAAA	-15	NA	19558250	19542388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361_19556694_19556889
ES.30223.27	chr7	-	3459	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	17	-3	intron_retention	FALSE	canonical	3	615	junction_1	45.9616385937471	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCTTGCTTTCCATCT	5746	False	NA	-11	True	AATAAA	-14	NA	19556678	19542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.28	chr7	-	2402	6	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	17	-3	intron_retention	FALSE	canonical	1	3	junction_1	287.919016391763	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCTTGCTTTCCATCT	5746	False	NA	-11	True	AATAAA	-14	NA	19556678	19542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19543655_19544981_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.29	chr7	-	3378	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-52	-3	intron_retention	FALSE	canonical	3	615	junction_1	44.2518047340696	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCTTGCTTTCCATCT	5677	False	NA	-11	True	AATAAA	-14	NA	19556747	19542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543185_19543420_19545060_19545244_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.3	chr7	-	3823	4	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	12	0	intron_retention	FALSE	canonical	3	678	junction_1	25.9015229067499	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5741	False	NA	-8	True	AATAAA	-17	NA	19556683	19542386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.31	chr7	-	2083	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	615	junction_1	42.8009154965982	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCTTGCTTTCCATCT	5729	False	NA	-11	True	AATAAA	-14	NA	19556695	19542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.32	chr7	-	2436	9	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	235.907688513961	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCCTTGCTTTCCATCT	5747	False	NA	-11	True	AATAAA	-14	NA	19556677	19542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553364_19554126_19556361
ES.30223.34	chr7	-	5271	2	ISM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	10	6792	10	-3668	5prime_fragment	FALSE	canonical	3	703	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGCTGCTCAAGTGT	5739	False	NA	NA	False	AGTAAA	-15	NA	19556685	19549178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19554126_19556361
ES.30223.4	chr7	-	1908	9	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	236.826380234551	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5736	False	NA	-9	True	AATAAA	-16	NA	19556688	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543655_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.5	chr7	-	1924	9	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	235.907688513961	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5746	False	NA	-9	True	AATAAA	-16	NA	19556678	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546531_19553971_19554126_19556361
ES.30223.6	chr7	-	1546	7	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	266.177102696682	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5746	False	NA	-9	True	AATAAA	-16	NA	19556678	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19542982_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.7	chr7	-	2013	9	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-62	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.901108656517	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5667	False	NA	-9	True	AATAAA	-16	NA	19556757	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545142_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30223.8	chr7	-	1694	8	NNC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	318.125183934031	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	5734	False	NA	-9	True	AATAAA	-16	NA	19556690	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19542982_19543066_19543185_19543420_19543589_19544977_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19556361
ES.30223.9	chr7	-	4401	6	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	-838	-1	intron_retention	FALSE	canonical	3	678	junction_3	27.6911538221144	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTGCTTTCCATCTGT	4891	False	NA	-9	True	AATAAA	-16	NA	19557533	19542387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ES.30224.1	chr7	-	202	1	Intergenic	novelGene_24974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAATGAAGAAAATATCT	NA	False	NA	NA	False	NA	NA	NA	19562897	19562695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19562700_19562900
ES.30225.1	chr7	+	176	1	Intergenic	novelGene_24975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACTTTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	19602728	19602904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19602700_19602900
ES.30226.1	chr7	-	5284	7	Fusion	ENSMUSG00000014686.9_ENSMUSG00000109214.2	novel	1635	6	NA	NA	19	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTGTCAGCCTCTCC	NA	False	NA	NA	False	CATAAA	-16	NA	19605344	19586022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19587824_19588814_19588891_19589041_19590278_19591743_19592864_19595033_19595668_19602045_19602161_19605042
ES.30226.2	chr7	-	2513	8	Fusion	ENSMUSG00000014686.9_ENSMUSG00000109214.2	novel	1635	6	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1.35526185435788	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGTGTCAGCCTCTCC	NA	False	NA	NA	False	CATAAA	-16	NA	19605363	19586022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19586239_19587496_19587824_19589998_19590278_19591743_19592020_19592518_19592864_19595033_19595668_19602045_19602161_19605042
ES.30226.3	chr7	-	881	3	Fusion	ENSMUSG00000014686.9_ENSMUSG00000109214.2	novel	436	2	NA	NA	1	-6395	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	TTTAAA	-6	NA	19605362	19592417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_19592864_19602045_19602161_19605042
ES.30227.1	chr7	-	2262	7	FSM	ENSMUSG00000049848.8	ENSMUST00000052605.8	3361	7	9	1090	9	-1090	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTTTAAAAGTTCTT	7522	False	NA	NA	False	AATAAA	-14	NA	19621881	19610756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19612106_19612753_19612817_19615738_19615825_19616499_19616547_19616726_19616872_19620208_19620578_19621678
ES.30228.1	chr7	+	2711	3	Genic_Genomic	ENSMUSG00000089886.2	novel	573	1	NA	NA	-7191	210	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAATAAATAAATTA	9570	False	NA	NA	False	NA	NA	NA	19638558	19646532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_19639138_19643099_19643229_19644529
ES.30229.1	chr7	+	503	3	NNC	ENSMUSG00000090075.2	novel	338	2	NA	NA	-32	154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTTTGCCTTAATTTT	NA	False	NA	NA	False	AATAAA	-35	NA	19654621	19661686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19654715_19657086_19657134_19661323
ES.3023.1	chr10	+	176	1	Intergenic	novelGene_2361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTGGCA	7641	False	NA	NA	False	NA	NA	NA	68145430	68145606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_68145400_68145600
ES.30230.1	chr7	-	2919	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	-14	0	-14	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9917	False	NA	-1	True	NA	NA	NA	19655099	19637502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ES.30230.10	chr7	-	2186	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	19	700	19	-700	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTGTCAAAATTGTAG	9950	False	NA	NA	False	CATAAA	-25	NA	19655066	19638202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ES.30230.11	chr7	-	1479	2	FSM	ENSMUSG00000040511.15	ENSMUST00000159261.2	1794	2	0	315	0	-315	multi-exon	FALSE	canonical	3	114	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCATTATATTTTAT	9978	False	NA	NA	False	AATAAA	-17	NA	19655038	19651516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19652835_19654877
ES.30230.3	chr7	-	2958	9	NNC	ENSMUSG00000040511.15	novel	2905	8	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.9270822244695	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTCCATTGTCCGA	9977	False	NA	-8	True	NA	NA	NA	19655039	19637509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19653723_19653830_19654877
ES.30230.5	chr7	-	3028	3	ISM	ENSMUSG00000040511.15	ENSMUST00000159413.2	540	4	299	-1486	299	-7	3prime_fragment	FALSE	canonical	3	119	junction_1	2.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTCCATTGTCCGA	NA	False	NA	-8	True	NA	NA	NA	19644490	19637509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_19639118_19639703_19639739_19643105
ES.30230.6	chr7	-	2844	8	NNC	ENSMUSG00000040511.15	novel	2905	8	NA	NA	0	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	40.5457665320742	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTCCATTGTCCGA	9978	False	NA	-8	True	NA	NA	NA	19655038	19637509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644675_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ES.30230.7	chr7	-	2628	8	NNC	ENSMUSG00000040511.15	novel	2905	8	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.0963126199191	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTCCATTGTCCGA	9977	False	NA	-8	True	NA	NA	NA	19655039	19637509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652611_19654877
ES.30230.8	chr7	-	3436	7	NIC	ENSMUSG00000040511.15	novel	2905	8	NA	NA	0	-8	intron_retention	FALSE	canonical	3	90	junction_3	10.5198225587063	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTACTCCATTGTCCG	9978	False	NA	-9	True	NA	NA	NA	19655038	19637510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ES.30230.9	chr7	-	2284	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	47	574	0	-574	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTGAGTGTACACTT	9978	False	NA	NA	False	NA	NA	NA	19655038	19638076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ES.30231.1	chr7	+	175	1	Intergenic	novelGene_24976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATAAAAATGTC	NA	False	NA	NA	False	NA	NA	NA	19663619	19663794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19663600_19663800
ES.30232.1	chr7	+	169	1	Intergenic	novelGene_24977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	2284	False	NA	NA	False	NA	NA	NA	19667749	19667918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_19667700_19667900
ES.30233.1	chr7	-	192	2	Intergenic	novelGene_24978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	7254	False	NA	NA	False	NA	NA	NA	19674177	19668805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_19668975_19674154
ES.30234.1	chr7	+	3630	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-73	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	7.39256383131049	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAATGTGTTGTAGTGG	NA	False	NA	15	True	AATAAA	-34	NA	19725316	19796879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30234.2	chr7	+	3445	10	NNC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-46	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0271237090475	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAATGTTTCCTCA	NA	False	NA	-3	True	AATAAA	-16	NA	19725343	19796861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19725639_19741948_19742019_19753060_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30234.3	chr7	+	3601	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-30	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	8.2516664983505	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTCCTCAATGAAT	NA	False	NA	3	True	AATAAA	-22	NA	19725359	19796867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19725614_19741948_19742019_19753034_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30234.4	chr7	+	3581	11	NNC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-29	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	9.43610088966836	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTTGTAGTGGTTG	NA	False	NA	18	True	AATAAA	-37	NA	19725360	19796882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782614_19782778_19783348_19783520_19796513
ES.30234.5	chr7	+	3412	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-21	13	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	7.83786315046595	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGAATGTGTTGTAGTG	NA	False	NA	14	True	AATAAA	-33	NA	19725368	19796878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30234.6	chr7	+	3398	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	9.56588588890262	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTCCTCAATGAAT	NA	False	NA	3	True	AATAAA	-22	NA	19725368	19796867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30234.7	chr7	+	3428	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	-20	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	8.7658146325849	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCCTCAATGAATGT	NA	False	NA	5	True	AATAAA	-24	NA	19725369	19796869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_19725614_19741948_19742019_19753034_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
ES.30235.1	chr7	-	130	1	Genic_Genomic	ENSMUSG00000109060.2	novel	NA	NA	NA	NA	5908	67	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCGAATGGATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	20327038	20326908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_20326900_20327000
ES.30236.1	chr7	+	159	1	Intergenic	novelGene_24979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20414035	20414194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_20414000_20414200
ES.30237.1	chr7	+	1064	2	Intergenic	novelGene_24980	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTCATGCTGAAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	20684105	20689113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_20684226_20688169
ES.30238.1	chr7	+	158	1	Intergenic	novelGene_24981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21705207	21705365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_21705200_21705400
ES.30239.1	chr7	+	161	1	Intergenic	novelGene_24982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAATAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22368629	22368790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_22368600_22368800
ES.3024.1	chr10	+	175	1	Intergenic	novelGene_2362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAGCTTACCC	NA	False	NA	NA	False	NA	NA	NA	68702396	68702571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_68702400_68702600
ES.30240.1	chr7	+	160	1	Intergenic	novelGene_24983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22927954	22928114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_22928000_22928100
ES.30241.1	chr7	+	5170	4	ISM	ENSMUSG00000045693.9	ENSMUST00000076470.5	3382	9	19789	17963	19789	-17956	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	23020405	23043739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_23021365_23035606_23035766_23036157_23036323_23039852
ES.30242.1	chr7	+	1348	8	ISM	ENSMUSG00000015721.19	ENSMUST00000015866.14	3508	16	35553	6	3570	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATTGAGGTCACCTC	NA	False	NA	NA	False	AATAAA	-13	NA	23120878	23141341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_23120968_23123320_23123489_23125953_23126125_23129453_23129625_23133046_23133218_23135171_23135343_23137313_23137485_23141105
ES.30243.1	chr7	-	650	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGGCTGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	23646717	23646067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23646100_23646700
ES.30244.1	chr7	+	4081	6	FSM	ENSMUSG00000057101.9	ENSMUST00000206184.2	827	6	-103	-3151	-80	-4	multi-exon	FALSE	canonical	3	9	junction_3	37.880865882395	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23781268	23807134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23781664_23784850_23784932_23785912_23786017_23797245_23797321_23800872_23800994_23803829
ES.30244.2	chr7	+	3926	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	-29	4	-29	-4	multi-exon	FALSE	canonical	3	55	junction_2	15.0499169432924	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23781319	23807134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
ES.30244.3	chr7	+	3834	4	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	-18	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	41.2660743091573	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23781330	23807134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_23781664_23797245_23797321_23800872_23800994_23803829
ES.30244.4	chr7	+	7072	4	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	55	junction_1	16.3095064303001	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781349	23807123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_23784932_23797245_23797321_23800872_23800994_23803829
ES.30244.5	chr7	+	6021	6	NNC	ENSMUSG00000057101.9	novel	827	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.2481578437062	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781353	23807123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23783705_23784850_23784932_23785912_23786017_23797245_23797321_23800872_23800989_23803829
ES.30244.6	chr7	+	3810	5	NNC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.609425015971	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23781353	23807134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23781582_23784850_23784932_23797245_23797321_23800872_23800994_23803829
ES.30244.7	chr7	+	3907	5	NNC	ENSMUSG00000057101.9	novel	827	6	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.0202647208255	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAAAAAGAAACAGAT	NA	False	NA	NA	False	AATAAA	-11	NA	23781371	23807119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23781664_23784850_23784932_23797245_23797369_23800872_23800994_23803829
ES.30244.8	chr7	+	5721	3	ISM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	13666	15	-1676	0	3prime_fragment	FALSE	canonical	3	88	junction_1	1.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23795014	23807123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_23797321_23800872_23800994_23803829
ES.30244.9	chr7	+	5739	1	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	4705	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTCCCACTTGTTTGA	NA	False	NA	NA	False	AATAAA	-26	NA	23801395	23807134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_23801400_23807100
ES.30245.1	chr7	-	1997	1	Antisense	novelGene_ENSMUSG00000057101.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCACCCATGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	23787047	23785050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_23785000_23787000
ES.30246.1	chr7	+	174	1	Intergenic	novelGene_24984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	23814403	23814577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_23814400_23814600
ES.30247.1	chr7	+	3183	4	FSM	ENSMUSG00000052675.12	ENSMUST00000215113.2	2628	4	-146	-409	-146	152	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCCATGCTGCTCCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	23817647	23827070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23817809_23821658_23821786_23823343_23823428_23824259
ES.30247.10	chr7	+	3344	3	ISM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	2	903	2	-903	intron_retention	FALSE	canonical	3	44	junction_2	1	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTTCTCATTATCC	NA	False	NA	NA	False	AATAAA	-21	NA	23833622	23839466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_23833913_23834682_23834741_23836470
ES.30247.11	chr7	+	5488	6	Fusion	ENSMUSG00000068962.8_ENSMUSG00000047603.10	novel	1332	5	NA	NA	2	2012	multi-exon	TRUE	canonical	0	0	junction_3	18.7018715640975	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCTATTACAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	23833622	23884625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_23833913_23834682_23834741_23836470_23836598_23875533_23875592_23877174_23877302_23879797
ES.30247.12	chr7	+	2724	6	Fusion	ENSMUSG00000068962.8_ENSMUSG00000047603.10	novel	1332	5	NA	NA	-3	124	multi-exon	FALSE	canonical	0	0	junction_3	18.7018715640975	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGAGTTGCATGCT	NA	False	NA	NA	False	NA	NA	NA	23833628	23881867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_23833913_23834682_23834741_23836470_23836598_23875533_23875592_23877174_23877302_23879797
ES.30247.13	chr7	+	2362	4	NNC	ENSMUSG00000047603.10	novel	3373	4	NA	NA	-2	-909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.2289111041209	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGTTCTTTCTTCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	23833629	23839460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23833913_23834682_23834741_23836470_23836598_23837566
ES.30247.14	chr7	+	4725	5	NNC	ENSMUSG00000047603.10	novel	1332	5	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTGTTTCTCATCCT	NA	False	NA	4	True	AATAAA	-12	NA	23833629	23842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23833913_23834412_23834741_23835633_23836598_23837717_23837928_23839724
ES.30247.15	chr7	+	3305	3	FSM	ENSMUSG00000068962.8	ENSMUST00000206547.2	3154	3	-42	-109	-16	109	multi-exon	FALSE	canonical	2	10	junction_2	13	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGCCTCAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	23874468	23881852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23875592_23877174_23877302_23879797
ES.30247.2	chr7	+	3197	4	ISM	ENSMUSG00000052675.12	ENSMUST00000005413.4	3044	5	5901	-156	-144	156	3prime_fragment	FALSE	canonical	0	0	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCTGCTCCTTTATAA	NA	False	NA	NA	False	AATAAA	-14	NA	23817649	23827074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_23817809_23821658_23821786_23823343_23823440_23824259
ES.30247.3	chr7	+	6843	5	Fusion	ENSMUSG00000052675.12_ENSMUSG00000047603.10	novel	3373	4	NA	NA	-7172	-2	intron_retention	FALSE	canonical	0	0	junction_1	20.1183995387307	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTGTTTCTCATCCT	NA	False	NA	4	True	AATAAA	-12	NA	23826421	23842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_23827956_23830244_23830360_23833573_23833913_23834682_23836598_23839724
ES.30247.4	chr7	+	9761	1	FSM	ENSMUSG00000047603.10	ENSMUST00000205834.2	1933	1	-697	-7131	-697	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTAATGAGTTGTTTC	NA	False	NA	-3	True	AATAAA	-5	NA	23832896	23842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23832900_23842700
ES.30247.5	chr7	+	3451	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	-75	-3	-2	3	multi-exon	TRUE	canonical	3	32	junction_3	6.18241233033047	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTCATCCTTTCCC	NA	False	NA	9	True	AATAAA	-17	NA	23833591	23842669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
ES.30247.7	chr7	+	2734	1	FSM	ENSMUSG00000047603.10	ENSMUST00000205834.2	1933	1	6	-807	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCCTTTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	23833599	23836333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23833600_23836300
ES.30247.8	chr7	+	2868	4	NNC	ENSMUSG00000047603.10	novel	3373	4	NA	NA	1	-907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.2289111041209	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCTTTCTTCTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	23833599	23839462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23833913_23834682_23834741_23836470_23836598_23837092
ES.30247.9	chr7	+	3633	5	FSM	ENSMUSG00000047603.10	ENSMUST00000205680.2	1332	5	-6	-2295	-6	-2	multi-exon	FALSE	canonical	0	0	junction_4	22.2640405137971	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTGTTTCTCATCCT	NA	False	NA	4	True	AATAAA	-12	NA	23833614	23842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23837717_23837928_23839724
ES.30248.1	chr7	+	1247	1	Antisense	novelGene_ENSMUSG00000087598.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	23894148	23895395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_23894100_23895400
ES.30249.1	chr7	+	4517	4	NNC	ENSMUSG00000030486.10	novel	2562	4	NA	NA	-66	1929	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.05480466765633	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTGCCTTCATCATGA	NA	False	NA	NA	False	NA	NA	NA	23954152	23963799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23954238_23955257_23955316_23957877_23958005_23959552
ES.30249.2	chr7	+	2485	4	NNC	ENSMUSG00000030486.10	novel	2562	4	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.05480466765633	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAGTTTATACAAAGGA	NA	False	NA	NA	False	NA	NA	NA	23954187	23961802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23954238_23955257_23955316_23957877_23958005_23959552
ES.3025.1	chr10	-	1568	6	Intergenic	novelGene_2363	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.85472369909914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCATGGTAAGTGCT	NA	False	NA	NA	False	CATAAA	-15	NA	68801227	68792029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_68792644_68793216_68793341_68798514_68798797_68799449_68799575_68800100_68800291_68800994
ES.3025.2	chr10	-	2015	5	Intergenic	novelGene_2364	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGCATGGTAAGTGC	NA	False	NA	NA	False	CATAAA	-14	NA	68801215	68792030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_68792644_68798514_68798797_68799449_68799575_68800100_68800875_68800994
ES.30250.1	chr7	+	5092	5	NNC	ENSMUSG00000055305.16	novel	3508	4	NA	NA	-2828	121	intron_retention	TRUE	canonical	0	0	junction_1	4.82182538049648	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTTGTAGCAACTGA	NA	False	NA	NA	False	NA	NA	NA	23967016	23976373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23967144_23968195_23968442_23968718_23971096_23972672_23972800_23974158
ES.30250.2	chr7	+	661	2	Intergenic	novelGene_24987	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTGCCTTGGTCATGA	NA	False	NA	3	True	NA	NA	NA	23968231	23969169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_23968442_23968718
ES.30250.3	chr7	+	2644	5	NNC	ENSMUSG00000055305.16	novel	2324	3	NA	NA	-1613	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.43705983732471	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAAGGATTCTGATTTA	NA	False	NA	NA	False	NA	NA	NA	23968231	23976245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23968442_23968718_23968881_23971037_23971096_23972672_23972800_23974158
ES.30250.4	chr7	+	4107	5	NNC	ENSMUSG00000055305.16	novel	3508	4	NA	NA	-1591	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.82182538049648	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGAAAAGGATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	23968253	23976242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23968442_23968718_23970369_23971037_23971096_23972672_23972800_23974158
ES.30250.5	chr7	+	3401	4	NNC	ENSMUSG00000055305.16	novel	3508	4	NA	NA	-214	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.18993502999218	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGAAAAGGATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	23969630	23976242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_23970763_23971037_23971096_23972672_23972800_23974158
ES.30250.6	chr7	+	2532	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	-1	977	-1	-10	multi-exon	FALSE	canonical	3	7	junction_2	2.44948974278318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGAAAAGGATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	23969843	23976242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
ES.30251.1	chr7	+	224	1	Intergenic	novelGene_24989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACCTAATACCAGG	NA	False	NA	NA	False	AAAAAG	-21	NA	23996550	23996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_23996600_23996800
ES.30252.1	chr7	-	4057	3	Antisense	novelGene_ENSMUSG00000052675.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTTTCTTTGCATA	NA	False	NA	NA	False	AATAAA	-13	NA	23832509	23827157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_23828229_23828632_23830084_23830974
ES.30253.1	chr7	-	1144	3	Intergenic	novelGene_24985	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	24031895	23845904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_23846902_24031672_24031786_24031861
ES.30253.10	chr7	-	3505	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	34	2863	12	67	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTATCATGTCTTTGAA	NA	False	NA	NA	False	NA	NA	NA	23907540	23896234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.11	chr7	-	2722	4	NNC	ENSMUSG00000087598.10	novel	6402	4	NA	NA	7	423	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	24.6576560118759	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTCTTTTTTATTGT	NA	False	NA	NA	False	TATAAA	-30	NA	23907567	23897083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23899468_23902794_23902922_23906482_23906541_23907414
ES.30253.12	chr7	-	2704	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-14	3712	-14	423	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTCTTTTTTATTGT	NA	False	NA	NA	False	TATAAA	-30	NA	23907588	23897083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.13	chr7	-	5736	7	Fusion	ENSMUSG00000074283.6_ENSMUSG00000087598.10	novel	2932	4	NA	NA	-119	414	multi-exon	TRUE	canonical	0	0	junction_2	12.7071720780913	110	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAACATCTAGTCTT	NA	False	NA	NA	False	TATAAA	-21	NA	23937104	23897092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_23899468_23902794_23902922_23926174_23927120_23927472_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.14	chr7	-	6293	2	NNC	ENSMUSG00000074283.6	novel	2130	3	NA	NA	7604	4876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGGTTAATCAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	23928453	23922120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23923664_23923703
ES.30253.15	chr7	-	5907	2	NNC	ENSMUSG00000074283.6	novel	2130	3	NA	NA	7103	3989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCAGTGAGACGTGTCT	NA	False	NA	NA	False	NA	NA	NA	23928954	23923007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23923664_23923703
ES.30253.16	chr7	-	5305	4	FSM	ENSMUSG00000074283.6	ENSMUST00000206362.2	2932	4	-135	-2238	-135	2238	multi-exon	FALSE	canonical	1	1	junction_3	7.93025150224688	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTCATGGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	23937120	23924758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23929266_23933775_23933903_23936042_23936101_23936507
ES.30253.17	chr7	-	5040	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-156	2238	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.49443825784929	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTCATGGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	23937141	23924758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.18	chr7	-	4662	5	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-132	2237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.81024967590665	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTGGTCATGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	23937117	23924759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23927120_23927472_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.19	chr7	-	4886	5	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-78	2229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.52569645248997	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCGTTGTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	23937063	23924767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23927120_23927472_23929266_23933775_23933903_23936042_23936101_23936507
ES.30253.2	chr7	-	6354	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	42	6	20	-6	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCACTTTGCTTCG	NA	False	NA	NA	False	NA	NA	NA	23907532	23893377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.20	chr7	-	4615	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-140	1829	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.49443825784929	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCTCAGGACTCACCA	NA	False	NA	NA	False	NA	NA	NA	23937125	23925167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.21	chr7	-	4167	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-110	1411	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.49443825784929	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAATGCTTTATTAAC	NA	False	NA	NA	False	NA	NA	NA	23937095	23925585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.22	chr7	-	3823	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-125	1052	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.49443825784929	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAGAGGTAGATTACT	NA	False	NA	NA	False	NA	NA	NA	23937110	23925944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.23	chr7	-	2514	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-138	139	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.49443825784929	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAGAAGATCGGATTT	NA	False	NA	NA	False	NA	NA	NA	23937123	23927266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
ES.30253.24	chr7	-	3181	3	FSM	ENSMUSG00000074283.6	ENSMUST00000037448.7	1935	3	-1047	-199	-119	132	multi-exon	FALSE	canonical	3	14	junction_1	3	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTATATAGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	23937104	23927273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23929266_23933775_23933903_23936042
ES.30253.25	chr7	-	817	3	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-125	-7800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAATTGAATTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	23937110	23935272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23935715_23936042_23936101_23936793
ES.30253.26	chr7	-	4622	3	Intergenic	novelGene_24986	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTTGAATCATCTTGA	NA	False	NA	NA	False	NA	NA	NA	23968093	23962320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_23965798_23966011_23966887_23967823
ES.30253.27	chr7	-	2716	3	Antisense	novelGene_ENSMUSG00000055305.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACGTTTAATTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	23979576	23976246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_23977909_23978016_23978951_23979456
ES.30253.28	chr7	-	2863	2	Antisense	novelGene_ENSMUSG00000055305.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	23979569	23976598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_23977909_23978016
ES.30253.29	chr7	-	1133	3	Intergenic	novelGene_24988	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCGTGTGTTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	23979575	23977828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_23977909_23978016_23978951_23979456
ES.30253.3	chr7	-	5898	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	29	475	7	-475	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGCAGCTGTGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	23907545	23893846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.30	chr7	-	2386	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	91	3	53	-3	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCATGTGGATTCTTTGT	NA	False	NA	4	True	TATAAA	-20	NA	23999009	23990466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
ES.30253.31	chr7	-	3260	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	71	-8	intron_retention	FALSE	canonical	3	35	junction_1	5.03587132480567	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGTATCATGTGGATTC	NA	False	NA	-1	True	TATAAA	-15	NA	23998991	23990471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_23991930_23992769_23992860_23994379_23995450_23996997_23997164_23997698_23997801_23998617
ES.30253.32	chr7	-	2182	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	82	6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	15.3310143173894	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTCGTATCATGTGG	NA	False	NA	-5	True	TATAAA	-11	NA	23998980	23990475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23997698_23997801_23998617
ES.30253.33	chr7	-	4728	5	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	117	4	intron_retention	FALSE	canonical	3	35	junction_1	1.29903810567666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGACTCGTATCATGT	NA	False	NA	-7	True	TATAAA	-9	NA	23998945	23990477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_23991930_23992769_23995450_23996997_23997164_23997698_23997801_23998617
ES.30253.34	chr7	-	2326	7	NNC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.8944436276912	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGACTCGTATCATGT	NA	False	NA	-7	True	TATAAA	-9	NA	23998767	23990477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995134_23995374_23996997_23997164_23997698_23997801_23998617
ES.30253.35	chr7	-	3170	6	FSM	ENSMUSG00000074282.11_ENSMUSG00000050605.18	ENSMUST00000108436.8	2599	6	-30	-541	-11	541	multi-exon	FALSE	canonical	1	2	junction_2	3.8262252939418	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACAGCTTCCATCAT	NA	False	NA	NA	False	AATAAA	-18	NA	24016060	24000587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24003299_24008495_24008623_24010889_24010929_24011806_24011921_24013774_24013837_24015943
ES.30253.36	chr7	-	3318	6	Fusion	ENSMUSG00000074282.11_ENSMUSG00000050605.18	novel	2599	6	NA	NA	-1	541	multi-exon	FALSE	canonical	0	0	junction_5	4.35430821141545	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACAGCTTCCATCAT	NA	False	NA	NA	False	AATAAA	-18	NA	24016050	24000587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_24003299_24008495_24008623_24010889_24010929_24011806_24011921_24013774_24013837_24015785
ES.30253.37	chr7	-	2539	5	FSM	ENSMUSG00000074282.11	ENSMUST00000032673.15	2529	5	-17	7	-17	-7	multi-exon	FALSE	canonical	2	9	junction_1	0.866025403784439	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGTACATGTTTGAATT	NA	False	NA	NA	False	AATAAA	-43	NA	24016108	24001227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
ES.30253.38	chr7	-	2701	2	NNC	ENSMUSG00000074282.11	novel	902	4	NA	NA	598	-2432	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTCTTAACCTGG	NA	False	NA	NA	False	NA	NA	NA	24008223	24005482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24007197_24007236
ES.30253.39	chr7	-	4091	3	NIC	ENSMUSG00000074282.11	novel	902	4	NA	NA	-5	0	intron_retention	FALSE	canonical	2	9	junction_2	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAATCACTTTGCG	NA	False	NA	NA	False	NA	NA	NA	24016054	24008002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24011921_24013774_24013837_24015943
ES.30253.4	chr7	-	4869	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-15	1548	-15	1382	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTCCCCTCTTTTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	23907589	23894919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.5	chr7	-	4540	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	29	1833	7	1097	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTCTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	23907545	23895204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.6	chr7	-	4459	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	-14	1957	-14	973	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGCTCTCTCTGGTTT	NA	False	NA	NA	False	NA	NA	NA	23907588	23895328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.7	chr7	-	4251	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	53	2098	-25	832	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTTCTCTGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	23907521	23895469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.8	chr7	-	3643	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	5	2754	5	176	multi-exon	FALSE	canonical	3	37	junction_1	10.4986771653491	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACAGATGTACCATTT	NA	False	NA	NA	False	NA	NA	NA	23907569	23896125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ES.30253.9	chr7	-	3658	4	NNC	ENSMUSG00000087598.10	novel	6402	4	NA	NA	7	176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	24.6576560118759	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGACAGATGTACCATTT	NA	False	NA	NA	False	NA	NA	NA	23907545	23896125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_23899468_23902794_23902922_23906482_23906541_23907414
ES.30254.1	chr7	-	492	1	FSM	ENSMUSG00000055826.6	ENSMUST00000069562.6	855	1	358	5	358	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGATGAGCGGGGCGT	NA	False	NA	NA	False	AATAAA	-8	NA	24033003	24032511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24032500_24033000
ES.30255.1	chr7	+	2282	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	-50	-1	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_3	34.9034170348701	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24098993	24122202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.11	chr7	+	2237	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	130	junction_4	14.0227988964004	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGGGTTTGTTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	24099131	24122200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24099317_24102816_24102973_24104951_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.12	chr7	+	3043	11	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	-2	-5	intron_retention	TRUE	non_canonical	0	0	junction_6	46.8893378072244	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTCTGGGGTTTGTTCT	NA	False	NA	14	True	AATAAA	-14	NA	24099146	24122198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105558_24106945_24107059_24114363_24114476_24115923_24116260_24116299_24116432_24119438_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.13	chr7	+	2030	14	NIC	ENSMUSG00000002210.12	novel	784	6	NA	NA	79	-7	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	39.9862402369118	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCTCTGGGGTTTGTT	NA	False	NA	12	True	AATAAA	-12	NA	24099424	24122196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24099493_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.14	chr7	+	1706	11	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	5766	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	47.5411400788833	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTGCTCTGGGGTTTG	NA	False	NA	10	True	AATAAA	-10	NA	24105111	24122194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119522_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.2	chr7	+	2272	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	-30	0	-30	0	multi-exon	FALSE	canonical	3	128	junction_3	14.7828462881374	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099013	24122203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.3	chr7	+	3107	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	-8	866	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	34.9034170348701	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATCGTTCCTTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	24099035	24123069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.4	chr7	+	1338	5	NIC	ENSMUSG00000002210.12	novel	1620	6	NA	NA	7	353	intron_retention	FALSE	canonical	3	128	junction_3	9.80752262296652	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTAATGCCTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	24099050	24107341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105558_24106945
ES.30255.5	chr7	+	2202	12	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	9	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	60.7444178301238	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCTCTGGGGTTTGTT	NA	False	NA	12	True	AATAAA	-12	NA	24099052	24122196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105378_24105459_24105558_24114363_24114476_24115920_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.6	chr7	+	3668	13	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	10	-3	intron_retention	FALSE	canonical	3	30	junction_3	36.1027661297888	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGGGTTTGTTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	24099053	24122200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.7	chr7	+	2656	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	34	-7	intron_retention	FALSE	canonical	3	128	junction_3	14.7937205146869	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCTCTGGGGTTTGTT	NA	False	NA	12	True	AATAAA	-12	NA	24099077	24122196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24120109_24120237_24120367_24120544_24120690_24121724
ES.30255.8	chr7	+	2103	15	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	40.9506921024965	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGGTTTGTTCTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	24099078	24122202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724_24121948_24122050
ES.30255.9	chr7	+	2328	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	35	-8	intron_retention	FALSE	canonical	3	128	junction_3	14.0435829552939	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGCTCTGGGGTTTGT	NA	False	NA	11	True	AATAAA	-11	NA	24099078	24122195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120367_24120544_24120690_24121724
ES.30256.1	chr7	-	5009	1	Antisense	novelGene_ENSMUSG00000002210.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	24111517	24106508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24106500_24111500
ES.30256.2	chr7	-	156	1	Intergenic	novelGene_24990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATGAATAAACA	NA	False	NA	NA	False	NA	NA	NA	24111110	24110954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24111000_24111100
ES.30257.1	chr7	-	163	1	Intergenic	novelGene_24991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATTCTACAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	24160139	24159976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24160000_24160100
ES.30258.1	chr7	+	1684	8	NNC	ENSMUSG00000046223.11	novel	1506	7	NA	NA	-531	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.74574737189174	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTAGGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	24161377	24175392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24161555_24161907_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ES.30258.2	chr7	+	1277	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	-7	236	-7	16	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGGGTCTCCCCA	NA	False	NA	NA	False	NA	NA	NA	24161901	24175156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ES.30258.3	chr7	+	1508	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	-4	2	-4	-2	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCTAGGTCTCT	NA	False	NA	NA	False	NA	NA	NA	24161904	24175390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ES.30258.4	chr7	+	3891	5	FSM	ENSMUSG00000046223.11	ENSMUST00000205877.2	872	5	-12	-3007	-1	0	multi-exon	FALSE	canonical	3	18	junction_3	6.53834841531101	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTAGGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	24161907	24175392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997
ES.30258.5	chr7	+	1490	7	NNC	ENSMUSG00000046223.11	novel	1506	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.4947076609541	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTAGGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	24161910	24175392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173648_24173782_24174663
ES.30258.6	chr7	+	177	1	Intergenic	novelGene_24992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24162887	24163064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24162900_24163100
ES.30259.1	chr7	-	4425	2	Antisense	novelGene_ENSMUSG00000046223.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24174778	24169729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24174020_24174643
ES.3026.1	chr10	+	4367	11	FSM	ENSMUSG00000019944.15	ENSMUST00000020101.12	4352	11	-24	9	-24	2	multi-exon	FALSE	canonical	0	0	junction_1	2.96816441593117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCCTCGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	69048439	69127612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69048565_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ES.3026.2	chr10	+	4454	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	-21	-11	2	0	multi-exon	FALSE	canonical	1	2	junction_2	2.33452350598575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGACTTTTGTGTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	69049002	69127621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ES.3026.3	chr10	+	4556	12	NNC	ENSMUSG00000019944.15	novel	4422	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.34021328561342	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCGACTTTTGTGTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	69049007	69127621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69099410_69099518_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ES.3026.4	chr10	+	1646	6	ISM	ENSMUSG00000019944.15	ENSMUST00000168117.8	2229	11	54854	-272	4519	-16	3prime_fragment	FALSE	canonical	1	4	junction_2	1.49666295470958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAACAAAATC	1042	False	NA	NA	False	NA	NA	NA	69105985	69125812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ES.30260.1	chr7	+	2188	9	FSM	ENSMUSG00000054793.9	ENSMUST00000068023.8	2161	9	-26	-1	-26	1	multi-exon	FALSE	canonical	3	44	junction_8	7.9912061042123	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTGGCTGTGTGTCTG	6375	False	NA	NA	False	ATTAAA	-18	NA	24181421	24203965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24199484_24199900_24200066_24200156_24200248_24200989_24201163_24202090_24202220_24202936
ES.30260.2	chr7	+	2631	7	NIC	ENSMUSG00000054793.9	novel	2161	9	NA	NA	38	0	intron_retention	FALSE	canonical	3	44	junction_6	9.03234926989282	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTGGCTGTGTGTCT	6439	False	NA	NA	False	ATTAAA	-17	NA	24181485	24203964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24200248_24200989_24201163_24202090_24202220_24202936
ES.30261.1	chr7	+	1231	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	-50	1	14	1	multi-exon	FALSE	canonical	3	407	junction_2	41.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGAGCTGCGTGAGTG	NA	False	NA	35	True	AATAAA	-29	NA	24206444	24215106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24206862_24209970_24210179_24214500
ES.30261.10	chr7	+	704	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177228.2	435	3	292	-561	261	-16	multi-exon	FALSE	canonical	1	2	junction_1	202.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206815	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24206862_24210109_24210179_24214500
ES.30261.11	chr7	+	1410	3	NNC	ENSMUSG00000064264.15	novel	1045	3	NA	NA	390	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206944	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24207558_24209970_24210179_24214500
ES.30261.12	chr7	+	1363	4	NNC	ENSMUSG00000064264.15	novel	1045	3	NA	NA	392	-14	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	169.854839985991	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	20	True	AATAAA	-14	NA	24206946	24215091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24207302_24208193_24208403_24209970_24210179_24214500
ES.30261.13	chr7	+	2339	1	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	6196	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24212750	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24212800_24215100
ES.30261.2	chr7	+	1059	3	NNC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	14	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	20	True	AATAAA	-14	NA	24206444	24215091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24206862_24209970_24210022_24214500
ES.30261.3	chr7	+	1261	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	-101	-1	23	1	multi-exon	FALSE	canonical	3	276	junction_2	107	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCGAGCTGCGTGAGTG	NA	False	NA	35	True	AATAAA	-29	NA	24206453	24215106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24206862_24209970_24210179_24214461
ES.30261.4	chr7	+	1421	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCTCCGCATATGTT	NA	False	NA	20	True	AATAAA	-14	NA	24206487	24215091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
ES.30261.5	chr7	+	1183	3	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	184.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCGAGCTGCGTGAG	NA	False	NA	33	True	AATAAA	-27	NA	24206513	24215104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24206862_24209947_24210179_24214500
ES.30261.6	chr7	+	4254	2	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-10	-16	intron_retention	FALSE	canonical	3	407	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206513	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24210179_24214500
ES.30261.7	chr7	+	1354	4	NNC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	-7	-13	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	150.608395811418	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCTCCGCATATGTTC	NA	False	NA	21	True	AATAAA	-15	NA	24206516	24215092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214500
ES.30261.8	chr7	+	1166	3	FSM	ENSMUSG00000064264.15	ENSMUST00000176880.2	1045	3	124	-245	0	-16	multi-exon	FALSE	canonical	3	38	junction_1	119	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206554	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24206862_24209947_24210179_24214461
ES.30261.9	chr7	+	1128	4	NNC	ENSMUSG00000064264.15	novel	435	3	NA	NA	46	-16	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	176.715087703971	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGCTCCGCATATG	NA	False	NA	18	True	AATAAA	-12	NA	24206600	24215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24206862_24208193_24208403_24210109_24210179_24214500
ES.30262.1	chr7	-	2459	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	1266	False	NA	NA	False	NA	NA	NA	24206850	24204391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24204400_24206800
ES.30262.2	chr7	-	989	1	Antisense	novelGene_ENSMUSG00000064264.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTTTGCTTTTTTAT	1266	False	NA	NA	False	NA	NA	NA	24206850	24205861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24205900_24206800
ES.30263.1	chr7	-	3945	1	FSM	ENSMUSG00000117477.2	ENSMUST00000234781.2	1973	1	836	-2808	836	2808	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTCCAGGAGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	24211044	24207099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24207100_24211000
ES.30264.1	chr7	+	137	1	Intergenic	novelGene_24993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAGAGAGAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	24223975	24224112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24224000_24224100
ES.30265.1	chr7	-	1668	1	Intergenic	novelGene_24994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCACAGTGGTCAGTC	NA	False	NA	NA	False	AAGAAA	-5	NA	24228633	24226965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24227000_24228600
ES.30266.1	chr7	+	6120	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	-34	-3	-34	3	multi-exon	FALSE	canonical	2	4	junction_1	2.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTCTATTTAATT	NA	False	NA	18	True	AATAAA	-19	NA	24230079	24238028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24230330_24230808_24231341_24232690
ES.30266.2	chr7	+	6063	4	NNC	ENSMUSG00000041037.9	novel	6083	3	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.68178700572909	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	15	True	AATAAA	-16	NA	24230080	24238025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24230330_24230808_24231341_24232690_24236241_24236293
ES.30266.3	chr7	+	6052	4	NNC	ENSMUSG00000041037.9	novel	6083	3	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	3.68178700572909	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	15	True	AATAAA	-16	NA	24230090	24238025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24230330_24230808_24231341_24232690_24236297_24236350
ES.30267.1	chr7	+	170	1	Intergenic	novelGene_24995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAACAAGATT	NA	False	NA	NA	False	NA	NA	NA	24239641	24239811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24239600_24239800
ES.30268.1	chr7	-	114	1	Intergenic	novelGene_24996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	24240877	24240763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24240800_24240900
ES.30269.1	chr7	+	2189	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	-33	-1	-33	-1	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTTTCTCTCTTAGGAGA	NA	False	NA	8	True	AATAAA	-20	NA	24246541	24272864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.10	chr7	+	3466	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-11	1	intron_retention	FALSE	canonical	3	337	junction_4	32.962022055074	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	24246611	24272861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270352_24270439_24271725_24272478_24272555_24272649
ES.30269.11	chr7	+	5469	11	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	337	junction_4	34.4696968364968	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246619	24272863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24266393_24266463_24266570_24266738_24269735_24269873_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.12	chr7	+	2570	18	NNC	ENSMUSG00000051768.10	novel	2528	19	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	159.937293075327	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAACGGTTTCTCTCT	NA	False	NA	1	True	AATAAA	-13	NA	24246619	24272857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265791_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270299_24270352_24270439_24270577_24271633_24272089_24272191_24272275_24272478_24272555_24272649
ES.30269.13	chr7	+	5161	12	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	337	junction_4	34.9410365195117	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246621	24272863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265926_24266282_24266393_24266463_24266570_24266738_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.14	chr7	+	2556	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	337	junction_4	32.1038652387108	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246621	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.15	chr7	+	4633	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	337	junction_4	33.2627143099493	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGTTTCTCTCTTAGGA	NA	False	NA	6	True	AATAAA	-18	NA	24246621	24272862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.16	chr7	+	2865	13	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	337	junction_4	33.5633728936768	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAACGGTTTCTCTCT	NA	False	NA	1	True	AATAAA	-13	NA	24246622	24272857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265926_24266282_24266393_24266463_24266570_24266738_24267352_24269640_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.17	chr7	+	4718	14	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	337	junction_4	32.3477773305192	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246628	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478
ES.30269.18	chr7	+	4940	14	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	3	1	intron_retention	FALSE	canonical	2	6	junction_5	106.615884114714	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	24246628	24272861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265791_24265926_24266282_24266393_24266463_24266570_24266738_24269735_24269873_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.19	chr7	+	2076	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.530054103417	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246629	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264977_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270299_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.2	chr7	+	2494	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-9	1	intron_retention	FALSE	canonical	3	337	junction_4	32.2522740853024	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	24246565	24272861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265926_24266282_24266393_24266463_24266570_24266738_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.20	chr7	+	4779	16	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	8	0	intron_retention	FALSE	canonical	2	2	junction_13	154.859793218109	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246633	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265791_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24269735_24269873_24270352_24270439_24270577_24271633_24271725_24272191_24272275_24272478_24272555_24272649
ES.30269.23	chr7	+	2087	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	131.2293882625	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAACGGTTTCTCTCT	NA	False	NA	1	True	AATAAA	-13	NA	24246645	24272857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265127_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269638_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.24	chr7	+	4623	15	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	25	0	intron_retention	FALSE	canonical	2	6	junction_5	103.137514701371	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246650	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265791_24265926_24266282_24266393_24266463_24266570_24266738_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.25	chr7	+	2261	18	NNC	ENSMUSG00000051768.10	novel	2528	19	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.233512810136	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246651	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24251504_24251692_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.26	chr7	+	2592	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	42	0	intron_retention	FALSE	canonical	3	337	junction_4	33.2118278660492	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246667	24272863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24267352_24269640_24269735_24269873_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.27	chr7	+	4591	15	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_14	102.935783429302	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246678	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272631
ES.30269.28	chr7	+	1718	2	FSM	ENSMUSG00000051768.10	ENSMUST00000206620.2	828	2	-29	-861	-29	861	multi-exon	FALSE	canonical	3	437	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATGAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	24246680	24248828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24246785_24247214
ES.30269.29	chr7	+	2665	14	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_5	104.991462036642	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246707	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265791_24265926_24266282_24266393_24266463_24266570_24266738_24267352_24269640_24269735_24269873_24270352_24270439_24270577_24271633_24271725_24272478
ES.30269.31	chr7	+	2032	17	NNC	ENSMUSG00000051768.10	novel	487	5	NA	NA	120	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	95.8988521503256	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCAACGGTTTCTCT	NA	False	NA	-1	True	AATAAA	-11	NA	24246877	24272855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24246973_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.32	chr7	+	7370	13	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-5725	1	intron_retention	FALSE	canonical	0	0	junction_9	107.489889705446	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	4490	False	NA	5	True	AATAAA	-17	NA	24259268	24272861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.33	chr7	+	4666	1	Genic_Genomic	ENSMUSG00000051768.10	novel	NA	NA	NA	NA	-5715	-2420	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAGAATGTAGTTAC	4500	False	NA	NA	False	NA	NA	NA	24259278	24263944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_24259300_24263900
ES.30269.35	chr7	+	5770	6	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	652	1	intron_retention	FALSE	canonical	3	338	junction_3	30.897249068485	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACGGTTTCTCTCTTAGG	NA	False	NA	5	True	AATAAA	-17	NA	24265645	24272861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24265926_24266282_24266393_24266463_24266570_24266738_24271725_24272478_24272555_24272649
ES.30269.36	chr7	+	4358	8	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	811	-2	intron_retention	FALSE	canonical	0	0	junction_4	138.986858870814	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAACGGTTTCTCTCT	NA	False	NA	1	True	AATAAA	-13	NA	24265804	24272857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267189_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.37	chr7	+	4264	1	NIC	ENSMUSG00000051768.10	novel	2528	19	NA	NA	-531	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24268595	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24268600_24272900
ES.30269.38	chr7	+	2239	4	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-405	0	intron_retention	FALSE	canonical	3	398	junction_2	14.1656862405839	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24268721	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24270352_24270439_24270577_24271633_24271725_24272478
ES.30269.39	chr7	+	612	4	ISM	ENSMUSG00000051768.10	ENSMUST00000206153.2	487	5	162	6	162	0	3prime_fragment	FALSE	canonical	0	0	junction_1	196.933716993533	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24270116	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24270352_24271633_24271725_24272478_24272555_24272649
ES.30269.4	chr7	+	2238	16	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	8	4	8	0	intron_retention	FALSE	canonical	3	337	junction_4	30.1185804593923	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246582	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478
ES.30269.5	chr7	+	2779	15	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	22	0	intron_retention	FALSE	canonical	3	337	junction_4	32.962022055074	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246596	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.6	chr7	+	2009	16	NIC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.105753215795	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	False	NA	3	True	AATAAA	-15	NA	24246599	24272859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24246785_24247214_24247308_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ES.30269.9	chr7	+	1505	9	ISM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	36	5566	-12	332	intron_retention	FALSE	canonical	3	337	junction_4	32.1937493933217	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGTGGGTGCTGGACT	NA	False	NA	NA	False	AATACA	-35	NA	24246610	24267297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738
ES.3027.1	chr10	+	809	2	Intergenic	novelGene_2365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTAATGTTTTATCAG	NA	False	NA	NA	False	NA	NA	NA	69131957	69146400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69132082_69145715
ES.30270.1	chr7	-	1992	2	NIC	ENSMUSG00000066721.4	novel	2741	4	NA	NA	0	-1604	intron_retention	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTGCTGTATGTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	24287066	24284866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24286668_24286875
ES.30271.1	chr7	+	990	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6311	2	6311	-2	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGAGTTCTGCTTGCTT	NA	False	NA	7	True	AATAAA	-22	NA	24293278	24308348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ES.30272.1	chr7	-	185	1	Intergenic	novelGene_24997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGACTTATGATCAA	2061	False	NA	0	True	NA	NA	NA	24297335	24297150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24297200_24297300
ES.30273.1	chr7	+	980	6	NNC	ENSMUSG00000054169.8	novel	1048	4	NA	NA	-5530	-7	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_4	10.0598210719674	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAACAAAGGTTGGCTC	796	False	NA	NA	False	AATAAA	-14	NA	24471100	24484070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24471221_24473674_24473740_24474864_24474981_24477550_24477687_24480294_24480655_24483887
ES.30273.2	chr7	+	1269	7	NNC	ENSMUSG00000054169.8	novel	1048	4	NA	NA	-5530	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	10.2265993044283	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGGTTGGCTCCTTC	796	False	NA	NA	False	AATAAA	-18	NA	24471100	24484074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24471221_24472009_24472071_24473674_24473740_24474864_24474981_24477550_24477911_24480294_24480655_24483887
ES.30273.3	chr7	+	1195	6	NNC	ENSMUSG00000054169.8	novel	1048	4	NA	NA	-5517	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	8.73155198117723	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGGTTGGCTCCTTC	809	False	NA	NA	False	AATAAA	-18	NA	24471113	24484074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24471221_24473674_24473740_24474864_24474981_24477550_24477911_24480294_24480655_24483887
ES.30273.4	chr7	+	1066	4	FSM	ENSMUSG00000054169.8	ENSMUST00000038069.9	1048	4	-25	7	-25	-3	multi-exon	FALSE	canonical	3	18	junction_2	7.31816613336672	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGGTTGGCTCCTTC	1082	False	NA	NA	False	AATAAA	-18	NA	24476605	24484074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24476765_24477550_24477911_24480294_24480655_24483887
ES.30274.1	chr7	+	494	1	FSM	ENSMUSG00000091955.3	ENSMUST00000170837.3	485	1	-9	0	-9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGATTAAACTCCTGG	NA	False	NA	NA	False	AATAAA	-34	NA	24561628	24562122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24561600_24562100
ES.30275.1	chr7	+	178	1	Intergenic	novelGene_25003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	24565753	24565931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24565800_24565900
ES.30276.1	chr7	+	1720	9	NNC	ENSMUSG00000011349.6	novel	1619	9	NA	NA	-312	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.25284042012203	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24569169	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24569389_24571902_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ES.30276.2	chr7	+	4132	6	NIC	ENSMUSG00000011349.6	novel	1619	9	NA	NA	4	-2	intron_retention	FALSE	canonical	3	10	junction_1	7.08801805866774	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24569485	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575549_24576577
ES.30276.3	chr7	+	1195	7	NIC	ENSMUSG00000011349.6	novel	1619	9	NA	NA	39	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.88350531415762	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24569520	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24569598_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ES.30276.4	chr7	+	2454	8	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	1468	2	1468	-2	3prime_fragment	FALSE	canonical	3	10	junction_2	6.36315927180574	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24570949	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24572131_24572204_24572360_24573346_24573424_24573622_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ES.30276.5	chr7	+	1069	5	ISM	ENSMUSG00000011349.6	ENSMUST00000011493.6	1619	9	4113	2	4113	-2	3prime_fragment	FALSE	canonical	3	13	junction_4	5.31507290636732	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24573594	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ES.30276.6	chr7	+	2019	3	NIC	ENSMUSG00000011349.6	novel	1619	9	NA	NA	4131	-2	intron_retention	FALSE	canonical	0	0	junction_2	13	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATCGAGAGTTGATTA	NA	False	NA	2	True	NA	NA	NA	24573612	24577074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24573804_24574331_24574459_24575373
ES.30277.1	chr7	+	647	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	132	-5	-130	5	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGATCTGGTTTTGGTT	NA	False	NA	31	True	AATAAA	-21	NA	24583927	24589236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.11	chr7	+	714	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	-81	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.12	chr7	+	697	6	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	10491.1802119685	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584280_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.13	chr7	+	951	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8873	junction_4	8248.73767236539	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24588387_24589165
ES.30277.14	chr7	+	517	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_5	10111.7436795045	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588394_24589165
ES.30277.15	chr7	+	438	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	10377.6198379012	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTGGTCTGGATCTGG	NA	False	NA	23	True	AATAAA	-13	NA	24584057	24589228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584093_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.16	chr7	+	598	7	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6365.37261718083	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24584093_24584560_24584632_24584869_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ES.30277.18	chr7	+	978	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8873	junction_4	7833.34750840916	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.20	chr7	+	523	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10588.4769707451	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCTGGTCTGGATCTG	NA	False	NA	22	True	AATAAA	-12	NA	24584057	24589227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588316_24588387_24589165
ES.30277.21	chr7	+	4731	2	ISM	ENSMUSG00000040952.17	ENSMUST00000130335.8	395	3	-3557	0	0	0	intron_retention	FALSE	canonical	3	15652	junction_1	0	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24587891_24588331
ES.30277.24	chr7	+	1816	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	397	junction_2	10627.5929659542	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584079	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331
ES.30277.25	chr7	+	729	7	NIC	ENSMUSG00000040952.17	novel	633	6	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	133	junction_1	9487.3138570526	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAATCCTGGTCTGGATC	NA	False	NA	20	True	AATAAA	-10	NA	24584102	24589225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584280_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ES.30277.26	chr7	+	577	7	NIC	ENSMUSG00000040952.17	novel	633	6	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	9465.75806085633	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584273	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584295_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ES.30277.27	chr7	+	3777	3	FSM	ENSMUSG00000040952.17	ENSMUST00000130335.8	395	3	259	-3641	259	3639	multi-exon	FALSE	canonical	3	8873	junction_2	3389.5	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTATTTTTGTCCT	350	False	NA	NA	False	NA	NA	NA	24587873	24592870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24587891_24588331_24588387_24589165
ES.30277.4	chr7	+	3267	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	-28	0	intron_retention	FALSE	canonical	3	8873	junction_4	6185.21555808688	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584029	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584093_24584560_24584632_24584876_24587891_24588331_24588387_24589165
ES.30277.5	chr7	+	532	6	NNC	ENSMUSG00000040952.17	novel	774	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9287.73704623468	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584042	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24584093_24584560_24584632_24584869_24584978_24587706_24587891_24588331_24588387_24589165
ES.30277.6	chr7	+	592	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	-1	2	-1	0	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584056	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ES.30277.7	chr7	+	4018	4	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	12982	junction_1	5453.8787624548	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584093_24584560_24584632_24584876_24587891_24588331
ES.30277.8	chr7	+	3680	4	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8873	junction_3	7141.47916517766	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTCTGGATCTGGT	NA	False	NA	24	True	AATAAA	-14	NA	24584057	24589229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24584093_24584560_24584632_24584876_24588387_24589165
ES.30277.9	chr7	+	157	3	NNC	ENSMUSG00000040952.17	novel	1284	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6491	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCTGGTCTGGATCTG	NA	False	NA	22	True	AATAAA	-12	NA	24584057	24589227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24584093_24584560_24584628_24589172
ES.30278.1	chr7	+	3340	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	-123	-5	2	0	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	8431	False	NA	36	True	AATATA	-18	NA	24602338	24626019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.10	chr7	+	5044	27	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-9	0	intron_retention	FALSE	canonical	3	251	junction_1	32.971746915724	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9864	False	NA	34	True	AATATA	-16	NA	24603771	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.11	chr7	+	3438	30	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	79.6750534974508	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9868	False	NA	34	True	AATATA	-16	NA	24603775	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24618608_24618777_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.12	chr7	+	3405	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-2	1	intron_retention	FALSE	canonical	3	251	junction_1	33.2996537671954	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9871	False	NA	32	True	AATATA	-14	NA	24603778	24626015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.14	chr7	+	1940	4	ISM	ENSMUSG00000040940.19	ENSMUST00000206011.2	419	6	-43	2609	4	31	5prime_fragment	FALSE	canonical	3	251	junction_1	22.9830855679176	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCCTGCACAGGAGTA	9879	False	NA	NA	False	NA	NA	NA	24603786	24609416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735
ES.30278.15	chr7	+	3417	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_19	64.6290671736111	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9884	False	NA	31	True	AATATA	-13	NA	24603791	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623057_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.16	chr7	+	3155	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	63.6541150663757	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9884	False	NA	34	True	AATATA	-16	NA	24603791	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.17	chr7	+	3251	28	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.654256159252	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTGTGTGTGTGAG	9889	False	NA	30	True	AATATA	-12	NA	24603796	24626013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611630_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.18	chr7	+	4876	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	14	0	intron_retention	FALSE	canonical	3	251	junction_1	33.390978961308	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9889	False	NA	31	True	AATATA	-13	NA	24603796	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.19	chr7	+	3453	27	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	15	0	intron_retention	FALSE	canonical	3	251	junction_1	33.7241902188497	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9890	False	NA	31	True	AATATA	-13	NA	24603797	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.2	chr7	+	3367	28	NIC	ENSMUSG00000040940.19	novel	3212	29	NA	NA	-14	1	intron_retention	FALSE	canonical	3	35	junction_1	58.8492762180255	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8540	False	NA	32	True	AATATA	-14	NA	24602447	24626015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.20	chr7	+	3399	28	NIC	ENSMUSG00000040940.19	novel	4243	29	NA	NA	15	0	intron_retention	FALSE	canonical	3	251	junction_1	33.2521645489121	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9890	False	NA	31	True	AATATA	-13	NA	24603797	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.21	chr7	+	3299	29	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	63.8905613258376	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9890	False	NA	31	True	AATATA	-13	NA	24603797	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623029_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.23	chr7	+	3224	29	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	96.4895772630814	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGATCTGTGTGTGT	9890	False	NA	27	True	AATATA	-9	NA	24603797	24626010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607285_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621829_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623154_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.26	chr7	+	5209	26	NIC	ENSMUSG00000040940.19	novel	4243	29	NA	NA	-13	0	intron_retention	FALSE	canonical	3	24	junction_9	62.6483008548516	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9909	False	NA	31	True	AATATA	-13	NA	24603816	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.27	chr7	+	3322	28	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_20	64.5436018766374	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9909	False	NA	31	True	AATATA	-13	NA	24603816	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623271_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.28	chr7	+	5533	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-13	0	intron_retention	FALSE	canonical	3	7	junction_12	63.286142262498	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9909	False	NA	34	True	AATATA	-16	NA	24603816	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24618777_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.29	chr7	+	3193	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	64.8902418259091	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9909	False	NA	34	True	AATATA	-16	NA	24603816	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.3	chr7	+	5087	27	NNC	ENSMUSG00000040940.19	novel	3212	29	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_8	81.4329233536237	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	8552	False	NA	32	True	AATATA	-14	NA	24602459	24626015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612937_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.31	chr7	+	5807	27	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-8	0	intron_retention	FALSE	canonical	3	251	junction_1	33.5988561724157	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9914	False	NA	34	True	AATATA	-16	NA	24603821	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.32	chr7	+	4947	27	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_19	82.3698273734895	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9914	False	NA	34	True	AATATA	-16	NA	24603821	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623271_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.35	chr7	+	3281	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	1	1	intron_retention	FALSE	canonical	3	251	junction_1	34.0058092350174	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9923	False	NA	32	True	AATATA	-14	NA	24603830	24626015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.38	chr7	+	3554	27	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	16	0	intron_retention	FALSE	canonical	3	251	junction_1	33.3075146557707	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9940	False	NA	34	True	AATATA	-16	NA	24603847	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.39	chr7	+	3185	29	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	63.4076843826954	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9941	False	NA	31	True	AATATA	-13	NA	24603848	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622797_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.4	chr7	+	3392	28	NNC	ENSMUSG00000040940.19	novel	3212	29	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_11	95.2390105776119	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGATCTGTGTGTGT	8556	False	NA	27	True	AATATA	-9	NA	24602463	24626010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615499_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623057_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.40	chr7	+	3213	29	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.7918630055142	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTGTGTGAGGG	9944	False	NA	32	True	AATATA	-14	NA	24603851	24626015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611958_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.43	chr7	+	6625	25	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-1530	0	intron_retention	FALSE	canonical	3	251	junction_4	32.6036541493264	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	NA	False	NA	34	True	AATATA	-16	NA	24605541	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.44	chr7	+	3867	1	NIC	ENSMUSG00000040940.19	novel	3508	30	NA	NA	-1522	31	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCCTGCACAGGAGTA	NA	False	NA	NA	False	NA	NA	NA	24605549	24609416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24605500_24609400
ES.30278.45	chr7	+	3144	29	NNC	ENSMUSG00000040940.19	novel	1851	18	NA	NA	-648	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.6138201356034	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGATCTGTGTGTGT	NA	False	NA	27	True	AATATA	-9	NA	24606423	24626010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24606452_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.46	chr7	+	3302	28	ISM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	3130	0	-110	0	3prime_fragment	FALSE	canonical	3	251	junction_4	33.2521645489121	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	NA	False	NA	34	True	AATATA	-16	NA	24606961	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.47	chr7	+	4968	26	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-6	0	intron_retention	FALSE	canonical	3	251	junction_4	32.3655619447585	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	NA	False	NA	34	True	AATATA	-16	NA	24607065	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.48	chr7	+	3079	27	ISM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	3446	3	206	0	3prime_fragment	FALSE	canonical	3	251	junction_3	33.8244029760525	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	NA	False	NA	31	True	AATATA	-13	NA	24607277	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.49	chr7	+	2997	26	ISM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	3903	4	663	-1	3prime_fragment	FALSE	canonical	3	251	junction_2	34.4010697508086	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTGTGTGTGTGAG	NA	False	NA	30	True	AATATA	-12	NA	24607734	24626013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.5	chr7	+	3407	30	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.7911624612433	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTGAGGGCGTTG	8562	False	NA	37	True	AATATA	-19	NA	24602469	24626020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24602554_24603725_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.50	chr7	+	3817	15	NNC	ENSMUSG00000040940.19	novel	3212	29	NA	NA	544	-2	intron_retention	FALSE	canonical	0	0	junction_1	84.3924566219865	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGATCTGTGTGTGTGA	7839	False	NA	29	True	AATATA	-11	NA	24619170	24626012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24619947_24620166_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625549_24625664
ES.30278.7	chr7	+	3310	29	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_20	63.7328208145504	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGATCTGTGTGTGTGA	9849	False	NA	29	True	AATATA	-11	NA	24603756	24626012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623057_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.8	chr7	+	5137	26	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-20	0	intron_retention	FALSE	canonical	3	251	junction_1	33.3867997867421	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9853	False	NA	34	True	AATATA	-16	NA	24603760	24626017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30278.9	chr7	+	3431	28	NNC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_11	64.6605571760791	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	9864	False	NA	31	True	AATATA	-13	NA	24603771	24626014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615499_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ES.30279.1	chr7	-	169	1	Intergenic	novelGene_24998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGCAG	3128	False	NA	NA	False	NA	NA	NA	24313496	24313327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24313300_24313500
ES.30279.10	chr7	-	215	1	Intergenic	novelGene_25005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGTAATATTAAAGGCG	NA	False	NA	NA	False	NA	NA	NA	24620186	24619971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24620000_24620200
ES.30279.2	chr7	-	176	2	Intergenic	novelGene_24999	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	24479777	24313327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24313359_24479632
ES.30279.3	chr7	-	165	1	Intergenic	novelGene_25000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAACAAATT	6238	False	NA	NA	False	NA	NA	NA	24349578	24349413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24349400_24349600
ES.30279.4	chr7	-	1067	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	-11	3	-11	-3	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGCGCGTGCATGC	991	False	NA	NA	False	AATAAA	-18	NA	24371486	24367434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
ES.30279.5	chr7	-	2786	18	NNC	ENSMUSG00000052212.7	novel	2714	17	NA	NA	-80900	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.89210299341783	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCGTTTCTCTGTG	5367	False	NA	NA	False	AATAAA	-18	NA	24540636	24443409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24443879_24444258_24444391_24444493_24444680_24445541_24445689_24449730_24449851_24450000_24450121_24451388_24451575_24451687_24451823_24453697_24453824_24453977_24454098_24455574_24455761_24456006_24456148_24457420_24457538_24457754_24457875_24459016_24459212_24459423_24459568_24540060_24540173_24540606
ES.30279.6	chr7	-	173	1	Intergenic	novelGene_25001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	24475386	24475213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24475200_24475400
ES.30279.7	chr7	-	179	1	Intergenic	novelGene_25002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	24479781	24479602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24479600_24479800
ES.30279.8	chr7	-	177	2	Antisense	novelGene_ENSMUSG00000091955.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	85	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	24620164	24479602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24479699_24620083
ES.30279.9	chr7	-	177	1	Intergenic	novelGene_25004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	24614825	24614648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24614600_24614800
ES.3028.1	chr10	-	159	1	Intergenic	novelGene_2366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69144156	69143997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69144000_69144200
ES.30280.1	chr7	+	325	1	Intergenic	novelGene_25006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGATGTCGAATTGCG	3855	False	NA	NA	False	AATAAA	-22	NA	24644063	24644388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24644100_24644400
ES.30281.1	chr7	-	159	1	Intergenic	novelGene_25007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24658886	24658727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24658700_24658900
ES.30282.1	chr7	-	823	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	76	0	-40	0	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCCTGGTATTTTC	4571	False	NA	-5	True	AATAAA	-24	NA	24672103	24669176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ES.30283.1	chr7	+	175	1	Intergenic	novelGene_25008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	24675401	24675576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24675400_24675600
ES.30283.2	chr7	+	346	1	Intergenic	novelGene_25009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24675401	24675747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24675400_24675700
ES.30284.1	chr7	-	3597	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	20	4	5	-1	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTGTGTGTGTTAT	NA	False	NA	-5	True	AATATA	-14	NA	24705363	24677595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
ES.30284.4	chr7	-	2241	15	NNC	ENSMUSG00000040907.16	novel	3621	23	NA	NA	11478	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.178088796309	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTGTGTGTGTTAT	NA	False	NA	-5	True	AATATA	-14	NA	24693842	24677595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24692974_24693031_24693556_24693692_24693774
ES.30284.6	chr7	-	2103	14	NNC	ENSMUSG00000040907.16	novel	3621	23	NA	NA	11432	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.1731622304319	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTGTGTGTGTTAT	NA	False	NA	-5	True	AATATA	-14	NA	24693888	24677595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24686901_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774
ES.30284.7	chr7	-	1242	8	NNC	ENSMUSG00000040907.16	novel	3621	23	NA	NA	18696	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	17.1499985125245	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAAAGATGTGTGTGT	NA	False	NA	-10	True	AATATA	-9	NA	24686624	24677600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686533
ES.30285.1	chr7	-	4498	19	NIC	ENSMUSG00000003378.10	novel	4061	21	NA	NA	-93	0	intron_retention	FALSE	canonical	0	0	junction_13	1.84256932797522	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAATACCTGGGTTTTA	9297	False	NA	-6	True	AATAAA	-22	NA	24771619	24709273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24715399_24721865_24722040_24722410_24722521_24722707_24722822_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760765_24762302_24762482_24764553_24764720_24764797_24764896_24767434_24767600_24767868_24767998_24771464
ES.30285.2	chr7	-	4564	20	NNC	ENSMUSG00000003378.10	novel	4061	21	NA	NA	-744	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	1.75508757900348	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAATACCTGGGTTTTA	8401	False	NA	-6	True	AATAAA	-22	NA	24772515	24709273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24714956_24715232_24715399_24721865_24722040_24722410_24722521_24722707_24722825_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764720_24764797_24764896_24767434_24767600_24767868_24767998_24771464
ES.30285.7	chr7	-	3872	19	NNC	ENSMUSG00000003378.10	novel	3763	20	NA	NA	-54	-27	intron_retention	FALSE	non_canonical	0	0	junction_15	1.85259244450367	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAGAACAAAAC	9336	False	NA	-33	True	NA	NA	NA	24771580	24709300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24715399_24721865_24722040_24722410_24722521_24722707_24722825_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764713_24764797_24764896_24767434_24767600_24767868_24767998_24771464
ES.30285.8	chr7	-	4505	20	NNC	ENSMUSG00000003378.10	novel	3763	20	NA	NA	-4584	-27	intron_retention	FALSE	canonical	1	1	junction_16	1.68749679388225	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAGAACAAAAC	4561	False	NA	-33	True	NA	NA	NA	24776355	24709300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24714956_24715232_24715399_24721865_24722040_24722410_24722521_24722707_24722822_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764720_24764797_24764896_24767434_24767600_24767868_24767998_24775333
ES.30285.9	chr7	-	3606	17	NIC	ENSMUSG00000003378.10	novel	3763	20	NA	NA	-2956	-27	intron_retention	FALSE	canonical	1	1	junction_15	1.55999799679359	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAGAACAAAAC	NA	False	NA	-33	True	NA	NA	NA	24767574	24709300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24715399_24721865_24722040_24722410_24722521_24722707_24722822_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764720_24764797_24764896_24767434
ES.30286.1	chr7	+	3131	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	-2	1011	-2	1	multi-exon	FALSE	canonical	3	224	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4953	False	NA	23	True	AATAAA	-19	NA	24776627	24781906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24776812_24778959
ES.30286.2	chr7	+	3196	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	-50	-1	29	1	multi-exon	FALSE	canonical	3	92	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGTCAGGCCTAGC	4984	False	NA	23	True	AATAAA	-19	NA	24776658	24781906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24776908_24778959
ES.30286.3	chr7	+	3662	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	50	428	-29	-428	multi-exon	FALSE	canonical	3	224	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTAGTATATTTTGA	5005	False	NA	NA	False	AAGAAA	-21	NA	24776679	24782489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24776812_24778959
ES.30286.4	chr7	+	2370	3	NNC	ENSMUSG00000045252.12	novel	4140	2	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTGTCAGGCCTA	5006	False	NA	21	True	AATAAA	-17	NA	24776680	24781904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24776812_24778959_24779436_24780141
ES.30286.5	chr7	+	1069	2	NNC	ENSMUSG00000045252.12	novel	4140	2	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTATGCTTTTTGTCA	5039	False	NA	15	True	AATAAA	-11	NA	24776713	24781898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24776802_24780917
ES.30287.1	chr7	-	4204	15	NNC	ENSMUSG00000008496.20	novel	2340	14	NA	NA	-9623	1324	intron_retention	TRUE	canonical	0	0	junction_4	1.29559693908693	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAAACAAACAAACA	8483	False	NA	NA	False	NA	NA	NA	24888774	24790576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24793112_24794214_24794282_24796314_24796492_24796566_24796716_24796817_24796960_24797078_24797193_24799376_24799469_24799562_24799669_24814895_24815175_24815462_24815646_24820265_24820323_24820448_24820484_24820580_24820647_24859285_24859347_24888633
ES.30287.2	chr7	-	2313	17	NNC	ENSMUSG00000008496.20	novel	1934	15	NA	NA	-8665	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.22474487139159	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAACAAAAA	9441	False	NA	NA	False	AAAAAG	-32	NA	24887816	24791922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24792428_24792712_24792787_24792909_24793112_24794214_24794282_24796314_24796492_24796566_24796716_24796817_24796960_24797078_24797193_24799376_24799469_24799562_24799669_24814895_24815175_24815462_24815580_24820265_24820323_24820448_24820484_24820580_24820647_24859285_24859347_24887746
ES.30287.3	chr7	-	178	1	Intergenic	novelGene_25010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9933	False	NA	NA	False	NA	NA	NA	24859810	24859632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24859600_24859800
ES.30288.1	chr7	-	158	1	Intergenic	novelGene_25011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACAAATAAATCTTTT	4567	False	NA	NA	False	NA	NA	NA	24892690	24892532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24892500_24892700
ES.30289.1	chr7	+	181	1	Intergenic	novelGene_25012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAGTAAACAAA	581	False	NA	NA	False	NA	NA	NA	24898950	24899131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24899000_24899100
ES.30289.2	chr7	+	388	1	Antisense	novelGene_ENSMUSG00000054499.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAATGTATTGTA	583	False	NA	NA	False	NA	NA	NA	24898952	24899340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_24899000_24899300
ES.3029.1	chr10	-	147	1	Intergenic	novelGene_2367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGGAGTGAGCGACCTT	NA	False	NA	NA	False	NA	NA	NA	69147712	69147565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69147600_69147700
ES.30290.1	chr7	-	1933	7	NNC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-62	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.1226092146555	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTCCGGTACTTTTTG	NA	False	NA	-3	True	AATAAA	-32	NA	24920102	24902259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24905232_24905315_24910573_24910724_24916969_24917093_24918225_24918457_24919211_24919353_24919993
ES.30290.10	chr7	-	4425	4	NNC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	-32	0	intron_retention	FALSE	canonical	2	6	junction_1	40.1192666378083	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCAGGCTCTCCGGTAC	NA	False	NA	-9	True	AATAAA	-26	NA	24919328	24902265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24905315_24910573_24910724_24916969_24917093_24918225
ES.30290.11	chr7	-	4249	2	NNC	ENSMUSG00000054499.10	novel	4594	5	NA	NA	10893	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCAGGCTCTCCGGTA	NA	False	NA	-10	True	AATAAA	-25	NA	24908391	24902266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24905232
ES.30290.12	chr7	-	1194	2	NNC	ENSMUSG00000054499.10	novel	4594	5	NA	NA	10395	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGTCCAGGCTCTCCGGT	NA	False	NA	-11	True	AATAAA	-24	NA	24908889	24902267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24908784
ES.30290.3	chr7	-	1713	5	FSM	ENSMUSG00000054499.10	ENSMUST00000206750.2	4594	5	-40	2921	-28	4	multi-exon	FALSE	canonical	3	21	junction_4	29.7237278954037	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTCCGGTACTTTTT	NA	False	NA	-4	True	AATAAA	-31	NA	24919324	24902260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919211
ES.30290.7	chr7	-	1927	6	NNC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	36.2082863444267	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919324	24902264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24905232_24905315_24910573_24910724_24916969_24917093_24918225_24918593_24919211
ES.30290.8	chr7	-	1221	2	NNC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	13863	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24905421	24902264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24905292
ES.30290.9	chr7	-	1490	4	NNC	ENSMUSG00000054499.10	novel	1942	6	NA	NA	8154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.59966329107444	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCAGGCTCTCCGGTAC	NA	False	NA	-9	True	AATAAA	-26	NA	24911130	24902265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24903357_24905232_24905315_24910573_24910724_24910963
ES.30291.1	chr7	+	6097	3	FSM	ENSMUSG00000090330.3_ENSMUSG00000046541.10	ENSMUST00000055604.6	3380	3	39	-2756	39	0	multi-exon	FALSE	canonical	0	0	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTGCCTCCCTGGAT	2050	False	NA	7	True	TATAAA	-17	NA	24920888	24929688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24920930_24923539_24923633_24923725
ES.30292.1	chr7	+	1661	1	Intergenic	novelGene_25013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACGA	NA	False	NA	NA	False	NA	NA	NA	24938794	24940455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24938800_24940500
ES.30292.2	chr7	+	2655	1	Intergenic	novelGene_25014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAGAAACTGAAATG	NA	False	NA	NA	False	NA	NA	NA	24938794	24941449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24938800_24941400
ES.30292.3	chr7	+	166	1	Intergenic	novelGene_25015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCACATCAACAATAAAA	NA	False	NA	NA	False	NA	NA	NA	24939641	24939807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24939600_24939800
ES.30293.1	chr7	-	1999	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	72	0	intron_retention	FALSE	canonical	2	4	junction_10	114.819031523524	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937204	24927682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936991
ES.30293.10	chr7	-	2160	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	47	-1	intron_retention	FALSE	canonical	2	7	junction_2	115.505151400273	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937229	24927683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928946_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
ES.30293.11	chr7	-	1984	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	76	-1	intron_retention	FALSE	canonical	0	0	junction_10	116.012973412459	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937200	24927683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935159_24936994
ES.30293.12	chr7	-	5029	1	NIC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	-2044	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGGCTGCCTG	NA	False	NA	-2	True	AATAAA	-19	NA	24932713	24927684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24927700_24932700
ES.30293.13	chr7	-	8677	5	NIC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	61	-3	intron_retention	FALSE	canonical	3	363	junction_4	13.2476412994918	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTGTCTGGCTGCCT	NA	False	NA	-3	True	AATAAA	-18	NA	24937215	24927685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24928356_24928889_24930126_24930209_24931167_24931258_24933110_24933252
ES.30293.14	chr7	-	4175	9	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	1359	4	1359	-4	intron_retention	FALSE	canonical	3	363	junction_8	12.941575445053	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCCCTGTCTGGCTGCC	NA	False	NA	-4	True	AATAAA	-17	NA	24935917	24927686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252
ES.30293.15	chr7	-	1946	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	61	-9	intron_retention	FALSE	canonical	2	7	junction_2	141.415133560733	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTCTCCCTGTCTGG	NA	False	NA	-9	True	AATAAA	-12	NA	24937215	24927691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928946_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936994
ES.30293.16	chr7	-	1892	11	Fusion	ENSMUSG00000057177.13_ENSMUSG00000040857.16	novel	2260	11	NA	NA	37	-9	intron_retention	FALSE	canonical	2	7	junction_10	113.923658649115	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTCTCCCTGTCTGG	4549	False	NA	-9	True	AATAAA	-12	NA	24950118	24927691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24950003
ES.30293.17	chr7	-	1716	10	Fusion	ENSMUSG00000057177.13_ENSMUSG00000040857.16	novel	2260	11	NA	NA	24	-10	intron_retention	FALSE	canonical	1	3	junction_9	120.552227296607	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCCTTCTCCCTGTCTG	4536	False	NA	-10	True	AATAAA	-11	NA	24950131	24927692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24950003
ES.30293.18	chr7	-	2478	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	57	-10	intron_retention	FALSE	canonical	0	0	junction_8	153.149110346747	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCCTTCTCCCTGTCTG	NA	False	NA	-10	True	AATAAA	-11	NA	24937219	24927692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928620_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933231_24933337_24934977_24935166_24936802
ES.30293.19	chr7	-	2097	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	97	-10	intron_retention	FALSE	non_canonical	0	0	junction_3	115.940674484842	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCCTTCTCCCTGTCTG	NA	False	NA	-10	True	AATAAA	-11	NA	24937179	24927692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929396_24930015_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
ES.30293.2	chr7	-	3903	10	ISM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	-6	0	-6	0	intron_retention	FALSE	canonical	3	363	junction_8	12.2090838474908	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937282	24927682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977
ES.30293.20	chr7	-	2276	12	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	42	-11	intron_retention	TRUE	canonical	0	0	junction_9	147.011440494826	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACCCTTCTCCCTGTCT	NA	False	NA	-11	True	AATAAA	-10	NA	24937234	24927693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934325_24934395_24934977_24935166_24936802
ES.30293.21	chr7	-	3922	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	31	-13	intron_retention	FALSE	canonical	0	0	junction_9	153.886614102722	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAACCCTTCTCCCTGT	NA	False	NA	-13	True	AATAAA	-8	NA	24937245	24927695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934325_24934395_24934977
ES.30293.22	chr7	-	5335	1	Genic_Genomic	ENSMUSG00000057177.13	novel	NA	NA	NA	NA	-118	-3170	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTTTTTGAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24937394	24932059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_24932100_24937400
ES.30293.23	chr7	-	3143	2	NIC	ENSMUSG00000040857.16	novel	690	3	NA	NA	4	-767	intron_retention	FALSE	canonical	3	13	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4516	False	NA	-15	True	AATAAA	-14	NA	24950151	24942752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24945748_24950003
ES.30293.24	chr7	-	887	2	NNC	ENSMUSG00000040857.16	novel	3505	4	NA	NA	4	-767	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4516	False	NA	-15	True	AATAAA	-14	NA	24950151	24942752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24943597_24950108
ES.30293.25	chr7	-	2706	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	32	767	1	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4513	False	NA	-15	True	AATAAA	-14	NA	24950154	24942752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
ES.30293.3	chr7	-	2258	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	2	0	2	0	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937274	24927682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
ES.30293.5	chr7	-	3810	10	NIC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	59	0	intron_retention	FALSE	canonical	3	276	junction_9	36.3898642787002	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937217	24927682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24933110_24933252_24933337_24934977_24935166_24936802
ES.30293.6	chr7	-	3863	10	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	7	junction_2	119.813847382894	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937295	24927683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928946_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977
ES.30293.7	chr7	-	2132	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	124	-1	intron_retention	FALSE	canonical	0	0	junction_10	116.012973412459	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937152	24927683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935159_24936798
ES.30293.9	chr7	-	2287	10	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	58	-1	intron_retention	FALSE	canonical	3	64	junction_9	101.98995351153	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTCTGGCTGCCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	24937218	24927683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_24928356_24928889_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936994
ES.30294.1	chr7	-	176	1	Intergenic	novelGene_25016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24961332	24961156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_24961200_24961300
ES.30295.1	chr7	+	173	1	Intergenic	novelGene_25017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	24962050	24962223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24962000_24962200
ES.30296.1	chr7	+	5410	20	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_1	30.7031177642143	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	24967129	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24967182_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.10	chr7	+	5552	20	NNC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_1	30.126050975334	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	698	False	NA	12	True	ATTAAA	-14	NA	24979050	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24979242_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.11	chr7	+	6073	20	FSM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	22	1	22	-1	multi-exon	FALSE	canonical	3	37	junction_13	27.4875947844843	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	3273	False	NA	11	True	ATTAAA	-13	NA	24981625	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.14	chr7	+	8138	17	NIC	ENSMUSG00000005442.14	novel	6099	20	NA	NA	66	-1	intron_retention	FALSE	canonical	3	38	junction_7	28.2353391160793	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	3317	False	NA	11	True	ATTAAA	-13	NA	24981669	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.17	chr7	+	4418	20	NNC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_5	36.2331630590424	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	462	False	NA	9	True	ATTAAA	-11	NA	24982206	24993567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985246_24985353_24985482_24986231_24986435_24986525_24986752_24987174_24987279_24988533_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.18	chr7	+	7025	19	NNC	ENSMUSG00000005442.14	novel	6099	20	NA	NA	-88	-1	intron_retention	FALSE	canonical	0	0	junction_4	30.9555635319444	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	809	False	NA	11	True	ATTAAA	-13	NA	24982553	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985190_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.19	chr7	+	5876	18	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-261	0	intron_retention	FALSE	canonical	3	37	junction_11	28.2145757320046	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	2089	False	NA	12	True	ATTAAA	-14	NA	24983833	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.2	chr7	+	8197	21	FSM	ENSMUSG00000005442.14	ENSMUST00000169266.8	8221	21	10	14	10	0	multi-exon	FALSE	canonical	1	1	junction_1	31.7370446009076	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	24967138	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_24967182_24970259_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.20	chr7	+	5683	19	ISM	ENSMUSG00000005442.14	ENSMUST00000005578.13	6099	20	2345	3	-146	0	3prime_fragment	FALSE	canonical	3	38	junction_8	26.9047818045532	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	2204	False	NA	12	True	ATTAAA	-14	NA	24983948	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.22	chr7	+	4959	19	NNC	ENSMUSG00000005442.14	novel	6099	20	NA	NA	569	0	intron_retention	FALSE	canonical	0	0	junction_12	30.980529528666	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	2919	False	NA	12	True	ATTAAA	-14	NA	24984663	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990509_24990597_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.23	chr7	+	6063	10	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	116	0	intron_retention	FALSE	canonical	3	37	junction_5	28.9882905265958	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	3619	False	NA	9	True	ATTAAA	-11	NA	24985363	24993567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24986752_24987174_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.24	chr7	+	4586	13	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	983	0	intron_retention	FALSE	canonical	3	38	junction_2	28.352934396441	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	4486	False	NA	12	True	ATTAAA	-14	NA	24986230	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.26	chr7	+	4613	11	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	1330	-1	intron_retention	FALSE	canonical	3	38	junction_2	30.4350127320493	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	4833	False	NA	11	True	ATTAAA	-13	NA	24986577	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991740_24991841_24992207_24992380_24992513_24992592
ES.30296.27	chr7	+	4895	8	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	1461	-1	intron_retention	FALSE	canonical	3	56	junction_1	26.4898902548554	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	4964	False	NA	11	True	ATTAAA	-13	NA	24986708	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24986752_24987174_24989001_24989995_24990118_24990223_24990768_24990874_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.28	chr7	+	4185	11	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-1416	0	intron_retention	FALSE	canonical	3	37	junction_4	28.5383951896388	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	5527	False	NA	9	True	ATTAAA	-11	NA	24987271	24993567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.30	chr7	+	5382	6	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-1056	-1	intron_retention	FALSE	canonical	3	37	junction_2	34.9491058540845	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	5887	False	NA	11	True	ATTAAA	-13	NA	24987631	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24990118_24990223_24990391_24990479_24990768_24990874_24992207_24992380_24992513_24992592
ES.30296.31	chr7	+	3578	11	NNC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	-786	-1	intron_retention	FALSE	canonical	1	1	junction_5	37.9504940679301	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	6157	False	NA	11	True	ATTAAA	-13	NA	24987901	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990850_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.32	chr7	+	3895	7	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	-473	-1	intron_retention	FALSE	canonical	3	55	junction_4	22.7577825516166	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	6470	False	NA	11	True	ATTAAA	-13	NA	24988214	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24992513_24992592
ES.30296.33	chr7	+	3850	6	NIC	ENSMUSG00000005442.14	novel	6099	20	NA	NA	469	0	intron_retention	FALSE	canonical	3	51	junction_3	25.7945730726446	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGCTGGCTTGTTTA	7412	False	NA	15	True	ATTAAA	-17	NA	24989156	24993573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24990118_24990223_24990768_24990874_24991740_24991838_24991994_24992074_24992207_24992380
ES.30296.35	chr7	+	2764	8	NIC	ENSMUSG00000005442.14	novel	6099	20	NA	NA	-522	0	intron_retention	FALSE	canonical	3	45	junction_4	30.6494331938136	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGCTGGCTTGTTTA	8329	False	NA	15	True	ATTAAA	-17	NA	24990073	24993573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24990118_24990223_24990391_24990476_24990768_24990874_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.36	chr7	+	2410	7	ISM	ENSMUSG00000005442.14	ENSMUST00000169266.8	8221	21	23184	15	-283	-1	intron_retention	FALSE	canonical	3	37	junction_1	31.6003691961555	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	8568	False	NA	11	True	ATTAAA	-13	NA	24990312	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380
ES.30296.37	chr7	+	2804	3	NIC	ENSMUSG00000005442.14	novel	6096	20	NA	NA	-83	0	intron_retention	FALSE	canonical	3	129	junction_2	1	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	15	False	NA	12	True	ATTAAA	-14	NA	24990512	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24992207_24992380_24992513_24992592
ES.30296.38	chr7	+	2139	2	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	94	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGGGCTGCTGGCTTG	827	False	NA	11	True	ATTAAA	-13	NA	24991349	24993569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24991994_24992074
ES.30296.4	chr7	+	8288	21	NIC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	28	1	intron_retention	FALSE	canonical	3	7	junction_1	31.0547902907104	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGCTGCTGGCTTGTT	NA	False	NA	13	True	ATTAAA	-15	NA	24967839	24993571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24967970_24970259_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.5	chr7	+	8214	21	NNC	ENSMUSG00000005442.14	novel	4732	15	NA	NA	190	-1	intron_retention	FALSE	canonical	0	0	junction_1	31.3829173277438	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCTGCTGGCTTGTTT	NA	False	NA	14	True	ATTAAA	-16	NA	24968001	24993572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_24968057_24970259_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.7	chr7	+	7816	19	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	2877	0	intron_retention	FALSE	canonical	3	16	junction_1	29.4264620140897	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	NA	False	NA	9	True	ATTAAA	-11	NA	24970688	24993567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.8	chr7	+	8458	19	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	2887	0	intron_retention	FALSE	canonical	3	16	junction_1	29.5501248143423	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	24970698	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ES.30296.9	chr7	+	5840	19	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	4856	0	intron_retention	FALSE	canonical	3	16	junction_1	29.8872882677569	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	NA	False	NA	12	True	ATTAAA	-14	NA	24972667	24993570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_24973059_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ES.30297.1	chr7	-	3695	1	Antisense	novelGene_ENSMUSG00000005442.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCAAAACAAAACCCCTAA	8908	False	NA	NA	False	NA	NA	NA	24972708	24969013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_24969000_24972700
ES.30298.1	chr7	-	1667	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	202	-1010	202	700	multi-exon	TRUE	canonical	3	385	junction_2	17.4570902500961	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTCTCAGTCTGTACTT	8805	False	NA	NA	False	NA	NA	NA	24997105	24993773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
ES.30298.2	chr7	-	907	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	-4	-2	-4	2	multi-exon	FALSE	canonical	3	245	junction_5	66.0714764478591	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTCTGCTTTATGGT	8495	False	NA	0	True	ATTAAA	-17	NA	24997415	24994471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
ES.30298.4	chr7	-	2150	2	ISM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	43	1	-6	-1	intron_retention	FALSE	canonical	3	415	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTTTCTGCTTTAT	8542	False	NA	-3	True	ATTAAA	-14	NA	24997368	24994474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_24994802_24995545
ES.30299.1	chr7	+	131	1	Intergenic	novelGene_25018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAAGAAG	6998	False	NA	NA	False	NA	NA	NA	24997520	24997651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_24997500_24997700
ES.303.1	chr1	-	6934	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-386	-2	-91	2	multi-exon	FALSE	canonical	3	231	junction_29	35.4925256216009	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGCTTTTTT	6835	False	NA	4	True	AATAAA	-27	NA	36978994	36831269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.10	chr1	-	6698	42	FSM	ENSMUSG00000026116.12	ENSMUST00000194563.6	6698	42	2	-2	2	-1	multi-exon	FALSE	canonical	3	8	junction_41	58.4663297908698	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTTTTGTTTTGCTTT	6928	False	NA	1	True	AATAAA	-24	NA	36978901	36831272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245_36978638_36978777
ES.303.13	chr1	-	7734	39	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	0	intron_retention	FALSE	canonical	3	89	junction_2	50.6485705704616	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7122	False	NA	-1	True	AATAAA	-22	NA	36978707	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.14	chr1	-	6604	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	55.9871413808564	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7115	False	NA	-1	True	AATAAA	-22	NA	36978714	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.18	chr1	-	6941	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	0	intron_retention	TRUE	canonical	1	2	junction_21	69.0250600044126	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7122	False	NA	-1	True	AATAAA	-22	NA	36978707	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858249_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.2	chr1	-	6997	40	NIC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	2	intron_retention	TRUE	canonical	3	231	junction_28	35.7390461740834	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGCTTTTTT	7122	False	NA	4	True	AATAAA	-27	NA	36978707	36831269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.20	chr1	-	6536	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	73.7888933983607	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7121	False	NA	-1	True	AATAAA	-22	NA	36978708	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36978245
ES.303.21	chr1	-	6384	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	216	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	60.1949125757318	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7437	False	NA	-1	True	AATAAA	-22	NA	36978392	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911704_36920399_36920456_36928344_36928407_36978245
ES.303.22	chr1	-	6263	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-593	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	60.1770253086674	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	2489	False	NA	-1	True	AATAAA	-22	NA	36983340	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36983257
ES.303.23	chr1	-	6456	40	NIC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	60.5920927960218	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7122	False	NA	-1	True	AATAAA	-22	NA	36978707	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.24	chr1	-	6633	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	60.1968437710816	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7128	False	NA	-1	True	AATAAA	-22	NA	36978701	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855071_36855185_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.25	chr1	-	6159	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.3363441616774	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7140	False	NA	-1	True	AATAAA	-22	NA	36978689	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36847384_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.26	chr1	-	6620	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	59.5901837553804	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7128	False	NA	-1	True	AATAAA	-22	NA	36978701	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854983_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.27	chr1	-	6179	38	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	70.54462036457	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7128	False	NA	-1	True	AATAAA	-22	NA	36978701	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851739_36857825_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.28	chr1	-	7034	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-94	0	intron_retention	FALSE	non_canonical	0	0	junction_5	89.1801407265093	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7127	False	NA	-1	True	AATAAA	-22	NA	36978702	36831274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834501_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36852326_36852371_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.29	chr1	-	6570	42	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-93	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	59.4585423882786	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTTTTGTTTTGC	7128	False	NA	-2	True	AATAAA	-21	NA	36978701	36831275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245_36978312_36978376
ES.303.3	chr1	-	8219	31	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-10070	0	intron_retention	FALSE	canonical	3	231	junction_27	36.376259046557	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTGTTTTGCTTTT	NA	False	NA	2	True	AATAAA	-25	NA	36873932	36831271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834498_36835242_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842
ES.303.30	chr1	-	6555	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-106	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	72.8955374148514	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTTTTGTTTTGC	7115	False	NA	-2	True	AATAAA	-21	NA	36978714	36831275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858249_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.31	chr1	-	6620	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-107	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	59.8846756274091	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTTTTGTTTTGC	7114	False	NA	-2	True	AATAAA	-21	NA	36978715	36831275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855300_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.32	chr1	-	6541	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-106	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	60.8395028078521	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7115	False	NA	-4	True	AATAAA	-19	NA	36978714	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873970_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.33	chr1	-	6743	42	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-94	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_41	74.6608273686211	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7127	False	NA	-4	True	AATAAA	-19	NA	36978702	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36962100_36962210_36978245
ES.303.34	chr1	-	7811	38	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-3	intron_retention	FALSE	non_canonical	0	0	junction_23	62.3251916209784	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7122	False	NA	-4	True	AATAAA	-19	NA	36978707	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864425_36864509_36864621_36866091_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.36	chr1	-	5041	14	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-2276	-3	intron_retention	FALSE	canonical	3	250	junction_12	41.8869992964305	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	36851893	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36850676_36851241_36851385_36851637
ES.303.39	chr1	-	6541	43	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-112	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.8020403337719	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7109	False	NA	-4	True	AATAAA	-19	NA	36978720	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36831537_36831601_36831649_36831694_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.4	chr1	-	6589	40	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-112	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_37	60.7023650306607	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTGTTTTGCTTTT	7109	False	NA	2	True	AATAAA	-25	NA	36978720	36831271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36920414_36920456_36928344_36928407_36978245
ES.303.41	chr1	-	6394	41	NIC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-91	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_40	59.9247392568378	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	6835	False	NA	-4	True	AATAAA	-19	NA	36978994	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978777
ES.303.42	chr1	-	6755	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-106	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.8647043121511	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7115	False	NA	-4	True	AATAAA	-19	NA	36978714	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834610_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.43	chr1	-	6716	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.196547866136	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7122	False	NA	-4	True	AATAAA	-19	NA	36978707	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834104_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.44	chr1	-	6591	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	59.5150401159236	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7122	False	NA	-4	True	AATAAA	-19	NA	36978707	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858249_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.46	chr1	-	6432	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-93	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.6435176439872	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	7128	False	NA	-4	True	AATAAA	-19	NA	36978701	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838167_36838395_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855332_36858017_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.51	chr1	-	6229	41	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-165	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	60.1770253086674	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	2917	False	NA	-4	True	AATAAA	-19	NA	36982912	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36982860
ES.303.52	chr1	-	4561	25	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-497	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	72.9847658190849	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	36864359	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841027_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292
ES.303.53	chr1	-	5398	31	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-6325	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	67.9285572413318	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGAATTGTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	36870187	36831277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36870079
ES.303.55	chr1	-	11175	38	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-106	-6	intron_retention	FALSE	canonical	1	1	junction_5	61.3449931221296	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTGAATTGTTTTGT	7115	False	NA	-7	True	AATAAA	-16	NA	36978714	36831280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36835122_36835242_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.56	chr1	-	6940	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-7	intron_retention	FALSE	canonical	3	30	junction_6	56.4668597133829	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTGAATTGTTTTG	7122	False	NA	-8	True	AATAAA	-15	NA	36978707	36831281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.6	chr1	-	6829	42	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	75.701792921416	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTGTTTTGCTTTT	7122	False	NA	2	True	AATAAA	-25	NA	36978707	36831271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863485_36863670_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.60	chr1	-	6304	41	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	36774	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	60.1770253086674	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTGAATTGTTTTG	1992	False	NA	-8	True	AATAAA	-15	NA	36941834	36831281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36941703
ES.303.61	chr1	-	7879	7	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	3782	-7	intron_retention	FALSE	canonical	3	291	junction_2	42.304452090373	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTGAATTGTTTTG	NA	False	NA	-8	True	AATAAA	-15	NA	36845835	36831281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36838485_36840905_36841034_36843548
ES.303.68	chr1	-	7071	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-78	-9	intron_retention	FALSE	canonical	2	3	junction_40	75.3409541683671	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7143	False	NA	-10	True	AATAAA	-13	NA	36978686	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36962100_36962210_36978245
ES.303.7	chr1	-	6537	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-107	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	59.9008347187249	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTTTTGTTTTGCTTT	7114	False	NA	1	True	AATAAA	-24	NA	36978715	36831272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849441_36850496_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.70	chr1	-	7075	39	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-97	-9	intron_retention	FALSE	canonical	3	89	junction_2	49.9525328703781	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7124	False	NA	-10	True	AATAAA	-13	NA	36978705	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.74	chr1	-	6793	42	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-81	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	82.2034228999401	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7140	False	NA	-10	True	AATAAA	-13	NA	36978689	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36977717_36977899_36978245
ES.303.8	chr1	-	6723	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.5905305830949	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTTTTGTTTTGCTTT	7122	False	NA	1	True	AATAAA	-24	NA	36978707	36831272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834581_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855074_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.81	chr1	-	6407	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-99	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	68.8978909328871	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7122	False	NA	-10	True	AATAAA	-13	NA	36978707	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978468
ES.303.85	chr1	-	6217	41	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	307	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	68.8935728134345	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7528	False	NA	-10	True	AATAAA	-13	NA	36978301	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866349_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.86	chr1	-	6459	40	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-87	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	69.3221144769514	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	7134	False	NA	-10	True	AATAAA	-13	NA	36978695	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.87	chr1	-	6301	42	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-151	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	75.7077335291538	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	2931	False	NA	-10	True	AATAAA	-13	NA	36982898	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36982491_36982584_36982860
ES.303.88	chr1	-	6282	41	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	76	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	83.2138472551294	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCCTTGAATTGTTT	3158	False	NA	-10	True	AATAAA	-13	NA	36982671	36831283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858150_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36982550
ES.303.89	chr1	-	6541	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-98	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	59.9008347187249	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGCCTTGAATTGTT	7123	False	NA	-11	True	AATAAA	-12	NA	36978706	36831284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849537_36850567_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.91	chr1	-	3909	17	NIC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	594	-10	intron_retention	FALSE	canonical	3	250	junction_13	39.5288166247106	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGCCTTGAATTGTT	NA	False	NA	-11	True	AATAAA	-12	NA	36855073	36831284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967
ES.303.93	chr1	-	6445	41	NNC	ENSMUSG00000026116.12	novel	6546	41	NA	NA	-81	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	68.8978909328871	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGCCTTGAATTGTT	3001	False	NA	-11	True	AATAAA	-12	NA	36982828	36831284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36982550
ES.303.96	chr1	-	4834	34	ISM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-89	7089	-89	1673	5prime_fragment	FALSE	canonical	3	231	junction_22	31.684133213971	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCATCATGTTGATCAC	7132	False	NA	NA	False	AAAACA	-4	NA	36978697	36838360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.97	chr1	-	3268	26	NIC	ENSMUSG00000026116.12	novel	591	6	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	61.8143543200121	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTCTTTTCATTATA	7123	False	NA	NA	False	AATAAA	-22	NA	36978706	36853222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_36853499_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.98	chr1	-	3503	19	ISM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	-93	29697	-93	-3228	5prime_fragment	FALSE	canonical	3	231	junction_7	25.3818370950762	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGGTTTTACATATAA	7128	False	NA	NA	False	TATAAA	-42	NA	36978701	36860968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ES.303.99	chr1	-	5587	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTCTGCTGTGGTTGCC	5463	False	NA	NA	False	NA	NA	NA	36887253	36881666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_36881700_36887300
ES.3030.1	chr10	+	3339	1	Genic_Genomic	ENSMUSG00000112798.2	novel	NA	NA	NA	NA	-53	48	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGGTCATGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	69147915	69151254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_69147900_69151300
ES.3030.2	chr10	+	1997	1	Genic_Genomic	ENSMUSG00000112798.2	novel	NA	NA	NA	NA	2673	1432	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69150641	69152638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_69150600_69152600
ES.30300.1	chr7	+	1378	2	ISM	ENSMUSG00000058741.5	ENSMUST00000080288.5	1240	3	-54	0	-54	0	intron_retention	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTGATTTTCAGTGAGT	2071	False	NA	NA	False	AATAAA	-14	NA	25000781	25003557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25000900_25002297
ES.30301.1	chr7	+	10408	41	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-348	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_38	9.65284932027844	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTCATCTGTGCAGAG	NA	False	NA	18	True	AATAAA	-23	NA	25016240	25065349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030262_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059525_25059665_25060078_25060212_25062746
ES.30301.10	chr7	+	7878	31	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-11778	-3	intron_retention	TRUE	canonical	0	0	junction_10	9.44345746476834	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25033627	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25033674_25033990_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041789_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.11	chr7	+	8799	32	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-11777	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	9.4423052265681	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25033628	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25038364_25038417_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.12	chr7	+	7102	27	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-6431	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.7857702662669	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25038974	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043226_25045524_25045773_25045857_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.13	chr7	+	6567	20	ISM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	25426	-701	-3391	701	3prime_fragment	FALSE	canonical	3	17	junction_1	7.04909573580334	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATGTGTGTGCG	NA	False	NA	NA	False	CATAAA	-10	NA	25042014	25066043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.14	chr7	+	5455	18	NNC	ENSMUSG00000045039.10	novel	5669	18	NA	NA	182	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	9.69250414899064	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGTGCATCGTAACT	NA	False	NA	4	True	AATAAA	-9	NA	25045587	25065335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049107_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.15	chr7	+	5072	15	ISM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	1332	3	1332	-3	3prime_fragment	FALSE	canonical	3	20	junction_9	6.52311431818907	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25046737	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.17	chr7	+	3342	5	ISM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	12952	0	12952	0	3prime_fragment	FALSE	canonical	3	29	junction_1	6.60965203320114	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGCATCGTAACTTCAT	NA	False	NA	8	True	AATAAA	-13	NA	25058357	25065339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.2	chr7	+	5000	23	ISM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	-287	21893	-287	-21890	5prime_fragment	FALSE	canonical	1	8	junction_9	4.90761762404139	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGTCTCCCATTCATT	NA	False	NA	NA	False	AAAAAG	-16	NA	25016301	25043449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090
ES.30301.3	chr7	+	10326	41	FSM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	-278	-8	-278	8	multi-exon	FALSE	canonical	1	8	junction_9	8.91613705592282	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCATCTGTGCAGAGG	NA	False	NA	19	True	AATAAA	-24	NA	25016310	25065350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.4	chr7	+	10686	40	NIC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-242	-2	intron_retention	FALSE	canonical	1	8	junction_8	8.72036165702563	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTGCATCGTAACTTC	NA	False	NA	6	True	AATAAA	-11	NA	25016346	25065337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.5	chr7	+	9762	42	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	-232	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.52069663866176	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25016356	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25016499_25017002_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.7	chr7	+	11202	40	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	487	-4	intron_retention	FALSE	canonical	1	1	junction_22	9.65812722184108	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGTGCATCGTAACT	NA	False	NA	4	True	AATAAA	-9	NA	25017075	25065335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25044655_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.8	chr7	+	9341	40	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	9297	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.66500019642235	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTGCATCGTAACTT	NA	False	NA	5	True	AATAAA	-10	NA	25025885	25065336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25025969_25026976_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30301.9	chr7	+	9207	39	NNC	ENSMUSG00000045039.10	novel	10040	41	NA	NA	9354	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.4697493269672	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTGCATCGTAACTTC	NA	False	NA	6	True	AATAAA	-11	NA	25025942	25065337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040650_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ES.30302.1	chr7	-	1469	6	Antisense	novelGene_ENSMUSG00000045039.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGACACGAGCCCCCATA	356	False	NA	NA	False	NA	NA	NA	25029655	25016661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_25017118_25025803_25025967_25026892_25027101_25027908_25028088_25028172_25028264_25029283
ES.30302.2	chr7	-	176	1	Intergenic	novelGene_25019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	25019091	25018915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25018900_25019100
ES.30302.3	chr7	-	1871	3	Antisense	novelGene_ENSMUSG00000045039.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	356	False	NA	NA	False	NA	NA	NA	25029655	25026678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_25028089_25028174_25028264_25029283
ES.30303.1	chr7	-	3114	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	381	118	381	0	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	NA	False	NA	0	True	AATAAA	-27	NA	25095423	25079069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ES.30303.2	chr7	-	6808	5	NNC	ENSMUSG00000003123.16	novel	2661	10	NA	NA	2125	0	intron_retention	FALSE	non_canonical	0	0	junction_2	15.4515371403624	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	8320	False	NA	0	True	AATAAA	-27	NA	25086524	25079069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25079599_25079950_25082309_25082363_25082753_25082877_25084090_25084204
ES.30303.4	chr7	-	2913	11	NNC	ENSMUSG00000003123.16	novel	3613	10	NA	NA	378	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.2396288995256	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGGGAGTGTGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	25095426	25079074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25087745_25087943_25088079_25094925
ES.30303.5	chr7	-	3530	9	NIC	ENSMUSG00000003123.16	novel	3613	10	NA	NA	384	-257	intron_retention	FALSE	canonical	3	24	junction_5	5.01871497497118	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGCGGGCTTCCGTTA	NA	False	NA	NA	False	ACTAAA	-16	NA	25095420	25079342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ES.30303.6	chr7	-	1982	10	NNC	ENSMUSG00000003123.16	novel	3613	10	NA	NA	379	-259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.7806410858642	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTGCGCGGGCTTCCGT	NA	False	NA	NA	False	ACTAAA	-14	NA	25095425	25079344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25087685_25095390
ES.30303.7	chr7	-	2041	8	ISM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	695	3423	695	203	5prime_fragment	FALSE	canonical	3	24	junction_4	4.55801603815538	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25095109	25082374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ES.30304.1	chr7	+	3696	3	NNC	ENSMUSG00000053714.9	novel	2430	6	NA	NA	784	15434	intron_retention	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAACCAAAAAAAA	7151	False	NA	NA	False	NA	NA	NA	25095622	25100595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25098684_25098904_25099090_25100145
ES.30304.10	chr7	+	2778	1	NIC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	135726	-32500	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGGGTTGCCT	9121	False	NA	NA	False	NA	NA	NA	25230564	25233342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25230600_25233300
ES.30304.11	chr7	+	4194	2	Antisense	novelGene_ENSMUSG00000054385.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTAGTTGTCTTGGTT	9863	False	NA	NA	False	NA	NA	NA	25231306	25236322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25235339_25236160
ES.30304.12	chr7	+	175	1	Intergenic	novelGene_25025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATAAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	25232970	25233145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_25233000_25233100
ES.30304.13	chr7	+	520	1	Intergenic	novelGene_25026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGTTGTCTTGGTTCC	NA	False	NA	NA	False	NA	NA	NA	25235804	25236324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_25235800_25236300
ES.30304.2	chr7	+	3331	4	ISM	ENSMUSG00000053714.9	ENSMUST00000206300.2	1887	7	1055	32504	1055	-32504	internal_fragment	FALSE	canonical	0	0	junction_1	3.77123616632825	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATTGTCCTGGGTT	7422	False	NA	NA	False	NA	NA	NA	25095893	25233338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25096402_25116825_25116935_25230491_25230583_25230715
ES.30304.3	chr7	+	3230	6	NNC	ENSMUSG00000053714.9	novel	2430	6	NA	NA	1058	-32500	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.60768096208106	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTCCTGGGTTGCCT	7425	False	NA	NA	False	NA	NA	NA	25095896	25233342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25095989_25096114_25096332_25116825_25116935_25184387_25184482_25230491_25230583_25230715
ES.30304.4	chr7	+	3199	3	NIC	ENSMUSG00000053714.9	novel	2430	6	NA	NA	1059	-19317	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATAAATAGCCGTGTGT	7426	False	NA	NA	False	ATTAAA	-16	NA	25095897	25119646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25095989_25096114_25096402_25116825
ES.30304.5	chr7	+	4508	2	NNC	ENSMUSG00000053714.9	novel	2430	6	NA	NA	1068	15474	intron_retention	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATCAAAAAGCCAAACAAG	7435	False	NA	NA	False	NA	NA	NA	25095906	25100635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25098684_25098904
ES.30304.6	chr7	+	931	7	NNC	ENSMUSG00000053714.9	novel	2430	6	NA	NA	1068	-29516	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	3.53160335006952	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTTGTCTTGGTTCCAT	7435	False	NA	NA	False	NA	NA	NA	25095906	25236326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25095989_25096114_25096332_25116825_25116935_25184387_25184482_25230491_25230583_25230715_25230888_25236160
ES.30304.7	chr7	+	1791	2	ISM	ENSMUSG00000053714.9	ENSMUST00000206300.2	1887	7	1076	147713	1076	-20834	internal_fragment	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTCTACACACCAGC	7443	False	NA	NA	False	AATAAA	-16	NA	25095914	25118129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25096402_25116825
ES.30304.8	chr7	+	3114	4	NNC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	1205	-32504	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.64279609239471	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATTGTCCTGGGTT	7572	False	NA	NA	False	NA	NA	NA	25096043	25233338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25096332_25116825_25116935_25184387_25184482_25230715
ES.30304.9	chr7	+	2689	2	ISM	ENSMUSG00000053714.9	ENSMUST00000206300.2	1887	7	135629	32553	135629	-32553	internal_fragment	FALSE	canonical	3	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCGAAAACAAAAACAAAAA	9024	False	NA	NA	False	NA	NA	NA	25230467	25233289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25230583_25230715
ES.30305.1	chr7	-	1340	3	NNC	ENSMUSG00000003123.16	novel	3613	10	NA	NA	-86758	1277	intron_retention	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25184893	25095606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25096330_25116823_25116933_25184385
ES.30305.10	chr7	-	4975	7	NIC	ENSMUSG00000074272.11	novel	1399	8	NA	NA	0	2	intron_retention	FALSE	canonical	1	3	junction_5	10.382945418115	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTGGGGTTTTCTG	2868	False	NA	1	True	AATAAA	-23	NA	25177008	25161129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173944_25176129_25176895
ES.30305.11	chr7	-	3176	6	FSM	ENSMUSG00000074272.11	ENSMUST00000206687.2	1061	6	-128	-1987	-59	1	multi-exon	FALSE	canonical	3	9	junction_2	9.62081077664455	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2789	False	NA	0	True	AATAAA	-22	NA	25177087	25161130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ES.30305.12	chr7	-	3765	9	FSM	ENSMUSG00000074272.11	ENSMUST00000098669.8	2873	9	-85	-807	-55	1	multi-exon	FALSE	canonical	1	2	junction_6	10.3440804327886	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2793	False	NA	0	True	AATAAA	-22	NA	25177083	25161130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ES.30305.13	chr7	-	3636	8	FSM	ENSMUSG00000074272.11	ENSMUST00000098666.9	3656	8	21	-1	1	1	multi-exon	FALSE	canonical	1	2	junction_5	11.2122382116278	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2869	False	NA	0	True	AATAAA	-22	NA	25177007	25161130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ES.30305.14	chr7	-	3644	8	FSM	ENSMUSG00000074272.11	ENSMUST00000206676.2	1533	8	-124	-1987	-55	1	multi-exon	FALSE	canonical	0	0	junction_3	8.97161055320433	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTTGTGGGGTTTTCT	2793	False	NA	0	True	AATAAA	-22	NA	25177083	25161130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ES.30305.15	chr7	-	4919	6	NIC	ENSMUSG00000074272.11	novel	3656	8	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_4	11.8827606220104	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2869	False	NA	-1	True	AATAAA	-21	NA	25177007	25161131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173944_25176129_25176895
ES.30305.16	chr7	-	3410	7	NIC	ENSMUSG00000074272.11	novel	3656	8	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	11.2496913537908	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCACTTTGTGGGGTTTT	2838	False	NA	-2	True	AATAAA	-20	NA	25177038	25161132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173944_25174230_25175768_25176129_25176895
ES.30305.17	chr7	-	4552	9	NIC	ENSMUSG00000074272.11	novel	2873	9	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	9.49259579883184	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCACTTTGTGGGGTTTT	2853	False	NA	-2	True	AATAAA	-20	NA	25177023	25161132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164175_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ES.30305.19	chr7	-	3480	8	FSM	ENSMUSG00000074272.11	ENSMUST00000206583.2	1399	8	-98	-1983	-29	-3	multi-exon	FALSE	canonical	1	3	junction_5	10.0974840268985	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCACTTTGTGGGGTT	2819	False	NA	-4	True	AATAAA	-18	NA	25177057	25161134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173944_25174230_25175768_25176129_25176895
ES.30305.2	chr7	-	181	1	Intergenic	novelGene_25020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	25103893	25103712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25103700_25103900
ES.30305.20	chr7	-	4366	7	NIC	ENSMUSG00000074272.11	novel	1399	8	NA	NA	3	-3	intron_retention	FALSE	canonical	1	3	junction_4	9.67241208569794	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCACTTTGTGGGGTT	2881	False	NA	-4	True	AATAAA	-18	NA	25176995	25161134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173944_25174230_25175768_25176129_25176895
ES.30305.21	chr7	-	4296	8	NIC	ENSMUSG00000074272.11	novel	1399	8	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	9.5724946101434	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATAGCACTTTGTGGGGT	2851	False	NA	-5	True	AATAAA	-17	NA	25177025	25161135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164175_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173944_25174230_25175768_25176129_25176895
ES.30305.22	chr7	-	4226	7	NIC	ENSMUSG00000074272.11	novel	1722	8	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	10.2699670020026	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATAGCACTTTGTGGGG	2867	False	NA	-6	True	AATAAA	-16	NA	25177009	25161136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164175_25164273_25164306_25165741_25165863_25171222_25171499_25173944_25174230_25175768_25176129_25176895
ES.30305.23	chr7	-	4038	5	NIC	ENSMUSG00000074272.11	novel	1722	8	NA	NA	1	-5	intron_retention	FALSE	canonical	3	9	junction_1	9.97496867163	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATAGCACTTTGTGGGG	2869	False	NA	-6	True	AATAAA	-16	NA	25177007	25161136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164306_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ES.30305.24	chr7	-	1309	3	ISM	ENSMUSG00000074272.11	ENSMUST00000206687.2	1061	6	-49	7545	0	137	5prime_fragment	FALSE	canonical	3	11	junction_2	5.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTTGTTACTTCCTTT	2868	False	NA	NA	False	NA	NA	NA	25177008	25170662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25171499_25175768_25176129_25176895
ES.30305.3	chr7	-	172	1	Intergenic	novelGene_25021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTAAAAATCATCAGGGG	8829	False	NA	NA	False	NA	NA	NA	25123654	25123482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25123500_25123700
ES.30305.4	chr7	-	197	1	Intergenic	novelGene_25022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAACAACCTTGTGTG	7986	False	NA	NA	False	NA	NA	NA	25124497	25124300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25124300_25124500
ES.30305.5	chr7	-	177	1	Intergenic	novelGene_25023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGACTAAAAA	6356	False	NA	NA	False	NA	NA	NA	25126127	25125950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25126000_25126100
ES.30305.6	chr7	-	5385	5	NIC	ENSMUSG00000074272.11	novel	1722	8	NA	NA	1	5	intron_retention	FALSE	canonical	2	5	junction_1	11.0679718105893	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGGGTTTTCTGTCT	2869	False	NA	4	True	AATAAA	-26	NA	25177007	25161126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164175_25164273_25165863_25171222_25171499_25175768_25176129_25176895
ES.30305.7	chr7	-	3233	7	FSM	ENSMUSG00000074272.11	ENSMUST00000098668.3	1478	7	-128	-1627	-59	5	multi-exon	FALSE	canonical	3	11	junction_6	8	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGGGTTTTCTGTCT	2789	False	NA	4	True	AATAAA	-26	NA	25177087	25161126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ES.30305.8	chr7	-	3015	5	NIC	ENSMUSG00000074272.11	novel	1061	6	NA	NA	-16	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	10.0093706095838	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTGGGGTTTTCTGTC	2832	False	NA	3	True	AATAAA	-25	NA	25177044	25161127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25163326_25164273_25164306_25171222_25171499_25175768_25176129_25176895
ES.30305.9	chr7	-	4044	7	NIC	ENSMUSG00000074272.11	novel	1478	7	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	9.15453742990631	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTGGGGTTTTCTG	2824	False	NA	1	True	AATAAA	-23	NA	25177052	25161129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25164175_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ES.30306.1	chr7	-	5330	1	Intergenic	novelGene_25024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGACTATCCATAAGTT	6020	False	NA	NA	False	NA	NA	NA	25200512	25195182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_25195200_25200500
ES.30307.1	chr7	-	1509	4	ISM	ENSMUSG00000054385.15	ENSMUST00000145681.2	656	5	9120	-1004	9120	-220	3prime_fragment	FALSE	canonical	0	0	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCTTGCAGAACCACTG	3554	False	NA	NA	False	AATAAA	-14	NA	25227398	25216484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25217611_25218583_25218616_25220238_25220357_25227165
ES.30307.2	chr7	-	4232	1	NIC	ENSMUSG00000054385.15	novel	3140	7	NA	NA	13283	-1515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAACAAAAACAAAAAAAA	7717	False	NA	NA	False	NA	NA	NA	25223235	25219003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25219000_25223200
ES.30308.1	chr7	+	174	1	Intergenic	novelGene_25027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATCGAGTCTGAAA	3854	False	NA	NA	False	NA	NA	NA	25305388	25305562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_25305400_25305600
ES.30309.1	chr7	+	1475	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1729	False	NA	39	True	NA	NA	NA	25318828	25324976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ES.30309.10	chr7	+	1604	8	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	55.6743446576718	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1763	False	NA	38	True	NA	NA	NA	25318862	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320320_25320518_25320848_25320938_25321397_25321473_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ES.30309.11	chr7	+	5588	2	NIC	ENSMUSG00000057229.12	novel	2387	6	NA	NA	14	-1	intron_retention	FALSE	canonical	3	96	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1763	False	NA	38	True	NA	NA	NA	25318862	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25323615_25324139
ES.30309.12	chr7	+	4156	3	NIC	ENSMUSG00000057229.12	novel	2387	6	NA	NA	-116	0	intron_retention	FALSE	canonical	3	96	junction_2	18	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGTGGCCTTTCCTC	3105	False	NA	36	True	NA	NA	NA	25320204	25324973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25323364_25323451_25323615_25324139
ES.30309.13	chr7	+	1220	4	ISM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	2850	-1	1440	1	3prime_fragment	FALSE	canonical	3	96	junction_3	16.5193489244852	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGTGGCCTTTCCTCC	4668	False	NA	37	True	NA	NA	NA	25321767	25324974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25321850_25323223_25323364_25323451_25323615_25324139
ES.30309.14	chr7	+	2937	1	NIC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	1711	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	4939	False	NA	38	True	NA	NA	NA	25322038	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25322000_25325000
ES.30309.2	chr7	+	4270	4	NIC	ENSMUSG00000057229.12	novel	2387	6	NA	NA	2	1	intron_retention	FALSE	canonical	3	96	junction_3	16.5193489244852	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGTGGCCTTTCCTCC	1741	False	NA	37	True	NA	NA	NA	25318840	25324974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25320518_25321768_25323364_25323451_25323615_25324139
ES.30309.3	chr7	+	4083	4	NIC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	84	junction_1	20.3960780543711	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGTGGCCTTTCCTC	1743	False	NA	36	True	NA	NA	NA	25318842	25324973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25318886_25320320_25323364_25323451_25323615_25324139
ES.30309.4	chr7	+	1477	6	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.2330568450697	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1750	False	NA	38	True	NA	NA	NA	25318849	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320296_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ES.30309.5	chr7	+	1415	6	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	47.2795939068855	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1753	False	NA	38	True	NA	NA	NA	25318852	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323486_25323615_25324139
ES.30309.6	chr7	+	1306	6	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	46.5377266311968	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGGCCTTTCCTCCC	1758	False	NA	38	True	NA	NA	NA	25318857	25324975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320320_25320379_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ES.30309.7	chr7	+	1403	6	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.006666203768	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACCCTGTGGCCTTTC	1758	False	NA	33	True	NA	NA	NA	25318857	25324970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320320_25320518_25321768_25321813_25323223_25323364_25323451_25323615_25324139
ES.30309.8	chr7	+	3233	5	NIC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	13	0	intron_retention	FALSE	canonical	2	4	junction_2	46.7653718043597	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGTGGCCTTTCCTC	1762	False	NA	36	True	NA	NA	NA	25318861	25324973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25318886_25320320_25320938_25321768_25323364_25323451_25323615_25324139
ES.30309.9	chr7	+	1513	7	NNC	ENSMUSG00000057229.12	novel	1465	6	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.381369358755	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACCCTGTGGCCTTTCCT	1762	False	NA	35	True	NA	NA	NA	25318861	25324972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25318886_25320320_25320518_25321397_25321473_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ES.3031.1	chr10	+	159	1	Intergenic	novelGene_2368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGTAATAAATAAA	2395	False	NA	NA	False	NA	NA	NA	69153833	69153992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69153800_69154000
ES.30310.1	chr7	+	1850	1	FSM	ENSMUSG00000059479.8	ENSMUST00000206824.2	1844	1	-3	-3	1	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCAGGAGCGATTTC	9964	False	NA	8	True	NA	NA	NA	25327063	25328913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25327100_25328900
ES.30311.1	chr7	-	1692	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	213	-6	213	6	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCGTCTCTGTTTCCT	9895	False	NA	-3	True	AGTAAA	-25	NA	25358193	25329364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ES.30311.10	chr7	-	2878	3	NIC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	228	-5938	intron_retention	FALSE	canonical	3	262	junction_1	13	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACACCAAAAA	9910	False	NA	NA	False	NA	NA	NA	25358178	25335308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25337696_25340881_25341252_25358057
ES.30311.2	chr7	-	1729	10	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	226	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	113.260216065527	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCGTCTCTGTTTCC	9908	False	NA	-4	True	AGTAAA	-24	NA	25358180	25329365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25348652_25348704_25358057
ES.30311.3	chr7	-	3542	10	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	12837	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	115.093628015962	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	NA	False	NA	-9	True	AGTAAA	-19	NA	25345569	25329370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341255_25343474_25343575_25343680
ES.30311.4	chr7	-	1622	9	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	231	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	93.2448892701364	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTTCCTTCGTCTCT	9913	False	NA	-10	True	AGTAAA	-18	NA	25358175	25329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331107_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ES.30311.6	chr7	-	1671	9	NNC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	220	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.9247006990068	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTTCCTTCGTCTCT	9902	False	NA	-10	True	AGTAAA	-18	NA	25358186	25329371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341241_25358053
ES.30311.8	chr7	-	3379	6	NIC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	236	-3	intron_retention	FALSE	canonical	3	242	junction_2	23.9532878745278	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGCTTCCTTCGTCT	9918	False	NA	-12	True	AGTAAA	-16	NA	25358170	25329373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25329859_25330424_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ES.30311.9	chr7	-	2835	4	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	223	5886	223	-5886	5prime_fragment	FALSE	canonical	3	262	junction_1	14.5143607047182	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9905	False	NA	NA	False	NA	NA	NA	25358183	25335256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25337696_25340881_25340969_25341068_25341252_25358057
ES.30312.1	chr7	+	1065	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	-44	-1	-44	1	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTGTCTGGAGAGTACT	NA	False	NA	32	True	ATTAAA	-44	NA	25358544	25367458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ES.30312.2	chr7	+	3444	4	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	1266	junction_3	42.8200368467328	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358597	25367457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25358809_25362561_25363874_25364845_25364987_25365677
ES.30312.3	chr7	+	4748	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-11	-9	intron_retention	FALSE	canonical	3	1190	junction_1	35.2739280489145	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGATTCCGGTGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	25358604	25367448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ES.30312.4	chr7	+	2340	5	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	36	1	9	-1	intron_retention	FALSE	canonical	3	1190	junction_2	60.5929038749588	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGGTGTCTGGAGAGTA	NA	False	NA	30	True	ATTAAA	-42	NA	25358624	25367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677
ES.30312.5	chr7	+	1114	7	NNC	ENSMUSG00000061286.8	novel	1680	7	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	577.0184861279	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGGTGTCTGGAGAGTA	NA	False	NA	30	True	ATTAAA	-42	NA	25358626	25367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25358809_25360685_25360819_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ES.30312.6	chr7	+	2057	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	1215	junction_4	52.4517635547176	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGGTGTCTGGAGAGTA	NA	False	NA	30	True	ATTAAA	-42	NA	25358626	25367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25358809_25362561_25363874_25364845_25364987_25365677_25365768_25367124
ES.30312.7	chr7	+	1060	6	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	507.074905709206	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGGTGTCTGGAGAGTA	NA	False	NA	30	True	ATTAAA	-42	NA	25358626	25367456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25358809_25362561_25362676_25363672_25363874_25364845_25364987_25365677_25365768_25367124
ES.30312.8	chr7	+	1937	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	1190	junction_2	65.471367787759	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGATTCCGGTGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	25358634	25367448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25358809_25362561_25362676_25363751_25364987_25365677_25365768_25367124
ES.30313.1	chr7	-	5634	1	Antisense	novelGene_ENSMUSG00000061286.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAGAAATCTAGTCAAGG	4788	False	NA	NA	False	NA	NA	NA	25364933	25359299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_25359300_25364900
ES.30314.1	chr7	+	1719	1	Genic_Genomic	ENSMUSG00000061286.8	novel	NA	NA	NA	NA	6065	802	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGGTGGCACACACT	NA	False	NA	NA	False	CATAAA	-15	NA	25369876	25371595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_25369900_25371600
ES.30315.1	chr7	+	960	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	35	0	-23	0	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGCCTCCTTGTATC	NA	False	NA	8	True	AATAAA	-19	NA	25380239	25385983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
ES.30316.1	chr7	-	721	4	NNC	ENSMUSG00000061702.11	novel	877	4	NA	NA	-5852	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.816496580927726	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCGGAGTCTGTCTGTG	9686	False	NA	NA	False	ATTAAA	-14	NA	25380443	25368567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25368736_25369910_25370061_25372849_25373086_25380276
ES.30316.2	chr7	-	3314	2	FSM	ENSMUSG00000061702.11	ENSMUST00000126983.2	2547	2	-15	-752	-14	-401	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25374558	25369869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25373086_25374460
ES.30317.1	chr7	+	2172	7	FSM	ENSMUSG00000002603.16	ENSMUST00000002678.10	2175	7	64	-61	64	61	multi-exon	FALSE	canonical	3	17	junction_4	3.1446603773522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTGTCCCTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	25386490	25404563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
ES.30317.2	chr7	+	1063	7	NNC	ENSMUSG00000002603.16	novel	700	5	NA	NA	185	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.90068661521246	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGTCTCCGTGTCAT	NA	False	NA	NA	False	ATTAAA	-12	NA	25388536	25404501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_25388606_25391759_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
ES.30318.1	chr7	+	171	1	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATAATTACCAAAAAAAGT	NA	False	NA	NA	False	AGTAAA	-40	NA	25420999	25421170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421000_25421200
ES.30318.11	chr7	+	1857	6	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGGGTGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	25420999	25432565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25422427_25423982_25424268_25425346_25425640_25426159_25426338_25432449
ES.30318.12	chr7	+	7042	6	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	25421005	25436411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25425640_25426159_25426338_25432449_25432572_25432669_25432792_25433983
ES.30318.13	chr7	+	2251	1	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAGAAAAAAAAAAAAAAA	8727	False	NA	NA	False	NA	NA	NA	25442409	25444660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25442400_25444700
ES.30318.2	chr7	+	5793	1	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCCCTGATCTCAAA	NA	False	NA	NA	False	NA	NA	NA	25420999	25426792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421000_25426800
ES.30318.3	chr7	+	5269	2	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCTTTCCCCTGATCT	NA	False	NA	NA	False	NA	NA	NA	25420999	25426788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25425640_25426159
ES.30318.4	chr7	+	2164	5	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25420999	25426760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25422427_25423982_25424268_25425346_25425640_25426159
ES.30318.5	chr7	+	3271	4	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCTTTCCCCTGATCT	NA	False	NA	NA	False	NA	NA	NA	25420999	25426788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25422427_25423982_25425640_25426159
ES.30318.6	chr7	+	4413	8	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	25420999	25436411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25422427_25423982_25424268_25425346_25425640_25426159_25426338_25432449_25432572_25432669_25432792_25433983
ES.30318.7	chr7	+	3074	15	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGGCCCGGATTGAAC	NA	False	NA	NA	False	NA	NA	NA	25420999	25455699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25421789_25422230_25422427_25423982_25424268_25425346_25425640_25426159_25426338_25432449_25432572_25432669_25432792_25433983_25434250_25440251_25440362_25442345_25442452_25444517_25444660_25445774_25445846_25447746_25447902_25450289_25450416_25455586
ES.30318.8	chr7	+	4855	7	Antisense	novelGene_ENSMUSG00000040725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	25420999	25436411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_25422427_25423982_25424268_25425346_25425640_25426159_25426338_25432449_25432572_25432669_25432792_25433983
ES.30319.1	chr7	-	3078	5	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2890050646025	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATTCATCTGTTATGTA	NA	False	NA	-4	True	ATTAAA	-23	NA	25418523	25410531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412539_25413740_25413908_25414175_25414446_25415159_25415613_25418342
ES.30319.10	chr7	-	2012	3	NNC	ENSMUSG00000002608.9	novel	508	3	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418418	25410539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412264_25415400_25415613_25418342
ES.30319.12	chr7	-	3187	7	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	182	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.676611946046	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418234	25410539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25417569_25417705_25418180
ES.30319.13	chr7	-	2442	3	NNC	ENSMUSG00000002608.9	novel	508	3	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418459	25410539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412535_25415282_25415613_25418342
ES.30319.14	chr7	-	2770	5	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	-5	-9	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	40.4992283877113	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	False	NA	-12	True	ATTAAA	-15	NA	25418436	25410539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414270_25415159_25415613_25418342
ES.30319.15	chr7	-	2933	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	16	-10	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.3472280075613	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGCCATCCATTCATC	NA	False	NA	-13	True	ATTAAA	-14	NA	25418454	25410540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414270_25415159_25415613_25416278_25416425_25418342
ES.30319.16	chr7	-	2973	6	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	11	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1502075914224	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAACTGCCATCCATTCA	NA	False	NA	-15	True	ATTAAA	-12	NA	25418459	25410542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412539_25413740_25413908_25414175_25414270_25415159_25415613_25416278_25416425_25418342
ES.30319.17	chr7	-	3142	6	Fusion	ENSMUSG00000040725.14_ENSMUSG00000002608.9	novel	3032	5	NA	NA	-3112	-15	multi-exon	FALSE	canonical	0	0	junction_5	50.3452083122118	1463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGAAACTGCCATCCAT	NA	False	NA	-18	True	ATTAAA	-9	NA	25421625	25410545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25421475
ES.30319.18	chr7	-	1347	5	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	13	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2890050646025	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAGGCTGGCCTGAAAC	NA	False	NA	NA	False	NA	NA	NA	25418457	25412196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412539_25413740_25413908_25414175_25414446_25415159_25415613_25418342
ES.30319.19	chr7	-	1124	5	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	1	138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.5565171981554	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCTGTGTTACTTGC	NA	False	NA	NA	False	NA	NA	NA	25418469	25412221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412542_25413777_25413908_25414175_25414270_25415159_25415613_25418342
ES.30319.2	chr7	-	3015	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	14	3	-7	-3	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCATTCATCTGTTATG	NA	False	NA	-6	True	ATTAAA	-21	NA	25418499	25410533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
ES.30319.20	chr7	-	1264	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	77	1691	-5	138	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCTGTGTTACTTGC	NA	False	NA	NA	False	NA	NA	NA	25418436	25412221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
ES.30319.21	chr7	-	1400	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	2	138	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.4189835403502	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCTGTGTTACTTGC	NA	False	NA	NA	False	NA	NA	NA	25418426	25412221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25418342
ES.30319.22	chr7	-	1242	4	FSM	ENSMUSG00000002608.9	ENSMUST00000154143.8	1158	4	-28	-56	14	56	multi-exon	FALSE	canonical	3	101	junction_2	5.43650214343336	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTGGGGGACAGAGGT	NA	False	NA	NA	False	NA	NA	NA	25418456	25413502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25413908_25414175_25414446_25415159_25415613_25418342
ES.30319.23	chr7	-	4323	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-510	-29	-510	29	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGTTGGCCTTTAATTG	9574	False	NA	1	True	NA	NA	NA	25454692	25420560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.24	chr7	-	4185	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-491	-340	-484	23	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTACTGCAGTTGGCCTT	9600	False	NA	-5	True	NA	NA	NA	25454666	25420566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.25	chr7	-	3466	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1482	21	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_14	261.486810452872	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTACTGCAGTTGGCC	8602	False	NA	-7	True	NA	NA	NA	25455664	25420568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ES.30319.27	chr7	-	3786	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	285.236609623288	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGGGTTGAAACCCT	9528	False	NA	-28	True	AATAAA	-25	NA	25454196	25420589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445831_25447743_25447902_25450289_25450416_25453765
ES.30319.28	chr7	-	4109	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	2765	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	385.694869740808	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGGGTTGAAACCCT	NA	False	NA	-28	True	AATAAA	-25	NA	25451361	25420589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425556_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445768_25445847_25447747_25447902_25450289
ES.30319.3	chr7	-	4557	7	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	-1250	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	51.5040451485771	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	-9	True	ATTAAA	-18	NA	25419763	25410536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25417569_25417705_25418342
ES.30319.30	chr7	-	3382	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1447	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	365.990576437176	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	8637	False	NA	-30	True	AATAAA	-23	NA	25455629	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432466_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ES.30319.31	chr7	-	2561	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-27	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	348.330683842412	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9515	False	NA	-30	True	AATAAA	-23	NA	25454209	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420774_25422357_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.32	chr7	-	4773	6	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	11823	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	426.169168288838	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	NA	False	NA	-30	True	AATAAA	-23	NA	25429179	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426578_25426794
ES.30319.33	chr7	-	2649	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	292.888633236747	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9528	False	NA	-30	True	AATAAA	-23	NA	25454196	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420834_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.34	chr7	-	2236	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	3711	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	292.726602660786	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	NA	False	NA	-30	True	AATAAA	-23	NA	25450415	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420781_25422351_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289
ES.30319.35	chr7	-	3201	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-11	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	283.670628564545	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9587	False	NA	-30	True	AATAAA	-23	NA	25454137	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421355_25422332_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.36	chr7	-	4156	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-368	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	282.361840877399	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9716	False	NA	-30	True	AATAAA	-23	NA	25454550	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453759
ES.30319.37	chr7	-	2456	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.888633236747	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9506	False	NA	-30	True	AATAAA	-23	NA	25454218	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420777_25424137_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.38	chr7	-	2649	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-201	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	292.888633236747	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAGGGTTGAAACC	9883	False	NA	-30	True	AATAAA	-23	NA	25454383	25420591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420786_25424118_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.40	chr7	-	3054	10	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	335.530131487177	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGCAGGGTTGAAAC	9522	False	NA	-31	True	AATAAA	-22	NA	25454202	25420592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434111_25450315_25450416_25453765
ES.30319.41	chr7	-	3278	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-50	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	283.670628564545	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAGCAGGGTTGAAAC	9492	False	NA	-31	True	AATAAA	-22	NA	25454232	25420592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421406_25422400_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.42	chr7	-	3889	16	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	360.519896199302	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGCAGGGTTGAAA	9532	False	NA	31	True	AATAAA	-21	NA	25454192	25420593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25431811_25431911_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.43	chr7	-	4092	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-201	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	284.389724332864	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGCAGGGTTGAAA	9883	False	NA	31	True	AATAAA	-21	NA	25454383	25420593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432903_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.44	chr7	-	3699	8	ISM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	18888	5	5708	-5	3prime_fragment	FALSE	canonical	3	986	junction_3	41.1507928854602	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAAGCAGGGTTGAA	NA	False	NA	30	True	AATAAA	-20	NA	25435294	25420594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983
ES.30319.45	chr7	-	2712	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-41	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	283.670628564545	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGAAGGAAGCAGGGTT	9501	False	NA	27	True	AATAAA	-17	NA	25454223	25420597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420814_25422360_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.46	chr7	-	2615	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.330683842412	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGAAGGAAGCAGGGT	9544	False	NA	26	True	AATAAA	-16	NA	25454180	25420598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420795_25422288_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.47	chr7	-	2586	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.888633236747	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGAAGGAAGCAGGGT	9531	False	NA	26	True	AATAAA	-16	NA	25454193	25420598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420793_25423991_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.48	chr7	-	4609	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-201	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	413.641814883853	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAGGAAGGAAGCAGGG	9883	False	NA	25	True	AATAAA	-15	NA	25454383	25420599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25431811_25432570_25432668_25432903_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.49	chr7	-	3255	8	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	6776	-10	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_5	359.983219563561	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAGGAAGGAAGCAGGG	NA	False	NA	25	True	AATAAA	-15	NA	25434226	25420599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25431811_25432570_25432668_25432792_25433983
ES.30319.5	chr7	-	5658	4	ISM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	98	6	1	-6	intron_retention	FALSE	canonical	3	101	junction_3	5.43650214343336	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	-9	True	ATTAAA	-18	NA	25418415	25410536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159
ES.30319.51	chr7	-	2426	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	3	-49	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	358.852691835898	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTCTTTCA	9545	False	NA	-14	True	NA	NA	NA	25454179	25420638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420781_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.52	chr7	-	2878	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-201	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	283.670628564545	1320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTCTTTCA	9883	False	NA	-14	True	NA	NA	NA	25454383	25420638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25420789_25422288_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.53	chr7	-	2182	6	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	8457	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	430.625870100717	1312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTCTTT	NA	False	NA	-16	True	NA	NA	NA	25432545	25420640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424257_25425348_25425640_25426159_25426329_25432440
ES.30319.54	chr7	-	3778	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-416	-8	-409	8	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTAGTTTCTGGTGG	9675	False	NA	NA	False	NA	NA	NA	25454591	25420898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.55	chr7	-	3989	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-514	309	-514	8	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTAGTTTCTGGTGG	9570	False	NA	NA	False	NA	NA	NA	25454696	25420898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.56	chr7	-	3597	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-14	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	284.389724332864	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCGTGGTAGTTTCTGG	9528	False	NA	NA	False	NA	NA	NA	25454196	25420901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432903_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.57	chr7	-	6415	5	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	10950	5	intron_retention	FALSE	non_canonical	0	0	junction_4	470.166659281579	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCGTGGTAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	25430052	25420901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25425640_25426159_25426578_25426794
ES.30319.58	chr7	-	3132	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1482	4	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_14	261.486810452872	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCGTGGTAGTTTCTG	8602	False	NA	NA	False	NA	NA	NA	25455664	25420902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ES.30319.59	chr7	-	4507	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-407	4	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_5	273.755672758295	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCGTGGTAGTTTCTG	9677	False	NA	NA	False	NA	NA	NA	25454589	25420902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25431811_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.6	chr7	-	2844	5	NNC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5565171981554	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATCCATTCATCTGTT	NA	False	NA	-9	True	ATTAAA	-18	NA	25418470	25410536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25412539_25413740_25413908_25414175_25414270_25415159_25415613_25418342
ES.30319.62	chr7	-	4926	14	NIC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-376	4	intron_retention	FALSE	canonical	3	866	junction_13	89.5978523622581	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCGTGGTAGTTTCTG	9708	False	NA	NA	False	NA	NA	NA	25454558	25420902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25421789_25422230_25422423_25423979_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.63	chr7	-	1681	4	NIC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	518.634746232838	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCGTGGTAGTTTCTG	9540	False	NA	NA	False	NA	NA	NA	25454184	25420902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25421789_25422230_25422423_25423979_25424270_25453871
ES.30319.64	chr7	-	3249	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	286.225052384037	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCGTGGTAGTTTCTG	9544	False	NA	NA	False	NA	NA	NA	25454180	25420902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424142_25425440_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.65	chr7	-	3195	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	351.752086862672	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGTCGTGGTAGTTTC	9502	False	NA	NA	False	NA	NA	NA	25454222	25420904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425556_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.66	chr7	-	3402	16	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	276.520153977166	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCGTGGTAGTTT	9548	False	NA	NA	False	NA	NA	NA	25454176	25420905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422343_25422402_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.69	chr7	-	3323	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	351.895573853891	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9540	False	NA	NA	False	NA	NA	NA	25454184	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440291_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.72	chr7	-	3495	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	350.858662455993	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9534	False	NA	NA	False	NA	NA	NA	25454190	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25448029_25450289_25450416_25453871
ES.30319.73	chr7	-	3134	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	351.752086862672	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9530	False	NA	NA	False	NA	NA	NA	25454194	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424119_25425435_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.74	chr7	-	3624	16	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-201	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	276.520153977166	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9883	False	NA	NA	False	NA	NA	NA	25454383	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424026_25424068_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.75	chr7	-	3468	14	NIC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-115	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	293.733385530395	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9969	False	NA	NA	False	NA	NA	NA	25454297	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.76	chr7	-	1854	9	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.17447307361	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9530	False	NA	NA	False	NA	NA	NA	25454194	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421565_25434189_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.77	chr7	-	3384	16	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-201	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	340.057537615164	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9883	False	NA	NA	False	NA	NA	NA	25454383	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425401_25425577_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.78	chr7	-	2631	14	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	3711	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	394.358065752013	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	25450415	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422340_25424106_25424270_25425556_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289
ES.30319.79	chr7	-	3295	16	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	340.057537615164	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9547	False	NA	NA	False	NA	NA	NA	25454177	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871_25454046_25454105
ES.30319.8	chr7	-	3128	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.4189835403502	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCATCCATTCATCTGT	NA	False	NA	-10	True	ATTAAA	-17	NA	25418470	25410537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25418342
ES.30319.81	chr7	-	4676	13	NIC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	866	junction_12	92.6134064569248	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGAGTCGTGGTAGT	9510	False	NA	NA	False	NA	NA	NA	25454214	25420907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25421789_25422230_25422423_25423979_25425640_25426159_25426329_25432440_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.82	chr7	-	2163	11	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-748	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	428.927546329214	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGAGTCGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	25444540	25420908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424026_25425505_25425640_25426159_25426323_25432447_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517
ES.30319.85	chr7	-	2453	9	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	6766	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	465.415405847293	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGAGTCGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	25434236	25420908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25428814_25428941_25432440_25432570_25432668_25432792_25433983
ES.30319.86	chr7	-	3378	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	349.91457412299	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGAGTCGTGGTAG	9544	False	NA	NA	False	NA	NA	NA	25454180	25420908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422444_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.87	chr7	-	3352	15	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	285.068591817507	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAGGAGTCGTGGTAG	9540	False	NA	NA	False	NA	NA	NA	25454184	25420908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422332_25424003_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.88	chr7	-	3636	16	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	360.689463235189	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTCCAGGAGTCGTGG	9512	False	NA	NA	False	NA	NA	NA	25454212	25420911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25431811_25431956_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.89	chr7	-	3372	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	-196	608	-196	-291	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGACTTTTTTTGGTA	9888	False	NA	50	True	AAAAAG	-28	NA	25454378	25421197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.9	chr7	-	3105	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	51.5309615668095	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCATCCATTCATCTG	NA	False	NA	-11	True	ATTAAA	-16	NA	25418459	25410538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25417569_25417705_25418342
ES.30319.90	chr7	-	3012	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	34	308	-15	-308	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCAGAGGGAGGAAGC	9583	False	NA	33	True	AAAAAG	-11	NA	25454141	25421214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.91	chr7	-	2563	6	NNC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	13386	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	426.169168288838	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTAAG	NA	False	NA	9	True	TTTAAA	-23	NA	25427616	25421238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426578_25426794
ES.30319.92	chr7	-	3063	15	NNC	ENSMUSG00000040725.14	novel	3354	15	NA	NA	-20	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	351.752086862672	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTAAG	9522	False	NA	9	True	TTTAAA	-23	NA	25454202	25421238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25421789_25422230_25422423_25423979_25424284_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ES.30319.93	chr7	-	8740	6	ISM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	-35	15108	-28	0	intron_retention	FALSE	canonical	3	1041	junction_5	74.9309015026511	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACATCCGATTTCTT	9514	False	NA	NA	False	AATAAA	-22	NA	25454210	25436014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289
ES.30319.94	chr7	-	927	8	NNC	ENSMUSG00000040725.14	novel	1240	8	NA	NA	-1459	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	482.133269745947	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGATTCCACATCCG	8625	False	NA	NA	False	AATAAA	-15	NA	25455641	25436021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25436187_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ES.30319.95	chr7	-	1298	8	FSM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	-67	9	-11	-9	multi-exon	FALSE	canonical	0	0	junction_1	386.110907192559	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAAAGATTCCACATC	9531	False	NA	NA	False	AATAAA	-13	NA	25454193	25436023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25436187_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.30319.96	chr7	-	2900	7	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	-96	2502	-40	190	5prime_fragment	FALSE	canonical	3	866	junction_6	111.596619821371	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTATAGTCTTGAAATC	9502	False	NA	NA	False	NA	NA	NA	25454222	25438516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ES.3032.1	chr10	+	750	1	Intergenic	novelGene_2369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	3124	False	NA	NA	False	NA	NA	NA	69154562	69155312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69154600_69155300
ES.30320.1	chr7	-	3202	13	ISM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	14340	2	331	-2	3prime_fragment	TRUE	canonical	0	0	junction_11	1.95789002074512	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTCTCTTGTGTCCA	3848	False	NA	NA	False	CATAAA	-16	NA	25473772	25456699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508
ES.30320.2	chr7	-	2881	13	NIC	ENSMUSG00000002602.17	novel	4265	20	NA	NA	-131	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	2.09496751499609	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCTAAAGATCTTAAAT	3386	False	NA	NA	False	ATTAAA	-15	NA	25474234	25457051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473939
ES.30320.3	chr7	-	3086	15	NNC	ENSMUSG00000002602.17	novel	4265	20	NA	NA	-512	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1.94306721553363	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTCTAAAGATCTTAAAT	3005	False	NA	NA	False	ATTAAA	-15	NA	25474615	25457051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25474466
ES.30320.4	chr7	-	3570	20	FSM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	-8	703	5	-346	multi-exon	FALSE	canonical	0	0	junction_11	2.08941402539781	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGATTCTAGACTCTGAA	1394	False	NA	NA	False	TATAAA	-20	NA	25488120	25457400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ES.30321.1	chr7	+	197	1	Intergenic	novelGene_25028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	25509050	25509247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_25509000_25509200
ES.30322.1	chr7	-	2812	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	-65	-2	-65	2	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCCCCTCTGCCTGTGT	1539	False	NA	-4	True	AATAAA	-20	NA	25516143	25501897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
ES.30322.2	chr7	-	4470	8	NIC	ENSMUSG00000040703.12	novel	2745	9	NA	NA	-5	2	intron_retention	FALSE	canonical	3	20	junction_6	4.68606270481621	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACCCCCTCTGCCTGTGT	1694	False	NA	-4	True	AATAAA	-20	NA	25515988	25501897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_25503185_25503340_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
ES.30323.1	chr7	-	211	1	Antisense	novelGene_ENSMUSG00000097017.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGACCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	25517973	25517762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_25517800_25518000
ES.30324.1	chr7	+	915	2	NIC	ENSMUSG00000108415.2	novel	605	3	NA	NA	2	388	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATGAGCATTGCGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	25559566	25569696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25559652_25568866
ES.30324.2	chr7	+	525	2	NIC	ENSMUSG00000108415.2	novel	605	3	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	25559569	25569309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_25559652_25568866
ES.30325.1	chr7	+	5946	1	Antisense	novelGene_ENSMUSG00000040614.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAAAATGATATTTG	NA	False	NA	NA	False	NA	NA	NA	26086332	26092278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_26086300_26092300
ES.30325.2	chr7	+	5144	13	NNC	ENSMUSG00000040601.14	novel	4259	11	NA	NA	-47937	1442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.18731723739792	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCATAGCTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	26086600	26165473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26086684_26091585_26091653_26120005_26120070_26120156_26120286_26135310_26135411_26143574_26143914_26148671_26150245_26152781_26152941_26153459_26153625_26156450_26156619_26159063_26159235_26161866_26162038_26163518
ES.30325.3	chr7	+	5573	15	NNC	ENSMUSG00000040601.14	novel	4259	11	NA	NA	-47937	1447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.960973146219551	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGCTGCCTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	26086600	26165478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26086695_26091585_26091653_26110417_26110730_26111108_26111258_26120005_26120070_26135310_26135411_26137261_26137343_26143574_26143914_26148671_26150245_26152781_26152941_26153459_26153625_26156450_26156619_26159063_26159235_26161866_26162038_26163518
ES.30325.4	chr7	+	3889	14	NNC	ENSMUSG00000040601.14	novel	4259	11	NA	NA	-47906	462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.08240363688233	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAAGTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	26086631	26175097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26086695_26091585_26091653_26120005_26120070_26120156_26120286_26135310_26135411_26137261_26137343_26143574_26143914_26148671_26150245_26153459_26153625_26156450_26156619_26159063_26159235_26161866_26162038_26163518_26163690_26174470
ES.30325.5	chr7	+	2349	1	Intergenic	novelGene_25030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCACCACTGAGATAGGC	NA	False	NA	NA	False	NA	NA	NA	26165103	26167452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26165100_26167500
ES.30326.1	chr7	-	133	2	Intergenic	novelGene_25029	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTTGACTTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	26110765	26105686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26105792_26110737
ES.30327.1	chr7	+	1385	1	Intergenic	novelGene_25031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAATAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-39	NA	26383564	26384949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26383600_26384900
ES.30328.1	chr7	-	3745	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24715	229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.2218542818685	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACATGTTCAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	26410577	26364422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26391624_26392411_26392894_26393053_26410317
ES.30328.10	chr7	-	2457	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24695	-256	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	25.4213110510759	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATATTCATGTGTGTT	NA	False	NA	-3	True	CATAAA	-35	NA	26410557	26364907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26392894_26393056_26410317
ES.30328.11	chr7	-	2438	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-13768	-257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.6419317141348	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATATTCATGTGTGT	NA	False	NA	-4	True	CATAAA	-34	NA	26399630	26364908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26370671_26370813_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26399388
ES.30328.12	chr7	-	2800	15	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24716	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	26.1300710340576	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCCACAGTCAGAAATAT	NA	False	NA	-14	True	CATAAA	-24	NA	26410578	26364918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26391624_26391837_26392289_26392411_26392894_26393056_26410317
ES.30328.13	chr7	-	5002	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24732	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.9631015987709	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410594	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26388553_26389739_26389834_26390877_26390954_26410317
ES.30328.14	chr7	-	3827	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24710	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.6638511906708	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410572	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381154_26385684_26385816_26389739_26389834_26390877_26392411_26392894_26393053_26410317
ES.30328.15	chr7	-	2697	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24696	-324	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	26.854366959461	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410558	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26391808_26392411_26392894_26393053_26410317
ES.30328.16	chr7	-	1773	9	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24608	-324	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	25.5281707139387	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410470	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26380739_26380890_26381021_26381185_26389739_26389834_26410317
ES.30328.17	chr7	-	4360	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24699	-324	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	24.518840790686	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410561	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26379623_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26392411_26392894_26393053_26410317
ES.30328.18	chr7	-	3726	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24706	-324	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	21.8318139231158	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410568	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26392411_26392894_26393056_26410317
ES.30328.19	chr7	-	2233	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24710	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.327931858551	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410572	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26392289_26392411_26410317
ES.30328.2	chr7	-	2125	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24706	-231	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTTCTTAGAATTCTC	NA	False	NA	22	True	NA	NA	NA	26410568	26364882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
ES.30328.20	chr7	-	7851	7	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	289	-324	intron_retention	FALSE	canonical	1	1	junction_5	23.9095517872391	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26385573	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26373923_26374420_26374598_26378817_26379623_26380739_26380890_26381021
ES.30328.21	chr7	-	3198	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-324	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	25.9544434749558	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410604	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26379623_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26392289_26392411_26392894_26393053_26410317
ES.30328.22	chr7	-	2634	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24696	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.2218542818685	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410558	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26392163_26392411_26392894_26393053_26410317
ES.30328.23	chr7	-	2200	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24698	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.8118636625254	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGTGTCTTGTGCCT	NA	False	NA	0	True	NA	NA	NA	26410560	26364975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381154_26385684_26385816_26389739_26389834_26390877_26390954_26410317
ES.30328.24	chr7	-	2381	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24765	-326	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	26.323480389848	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTTGGTGTCTTGTGC	NA	False	NA	-2	True	NA	NA	NA	26410627	26364977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26392894_26393056_26410317
ES.30328.25	chr7	-	2069	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24710	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.5895980424099	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGTTTGGTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	26410572	26364979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26410317
ES.30328.26	chr7	-	5105	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-8202	-328	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	25.7689735922873	117	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGTTTGGTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	26394064	26364979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26370671_26370813_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877
ES.30328.27	chr7	-	3823	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24698	-328	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	24.3783829561264	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGTTTGGTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	26410560	26364979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385794_26389739_26389834_26390877_26392411_26392894_26393056_26410317
ES.30328.28	chr7	-	6919	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-9467	-329	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	20.4404011702315	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATGTTTGGTGTCTTG	NA	False	NA	-5	True	NA	NA	NA	26395329	26364980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26392411_26392894
ES.30328.29	chr7	-	2463	14	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24576	-330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	25.0778669005963	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATGTTTGGTGTCTT	NA	False	NA	-6	True	NA	NA	NA	26410438	26364981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26391624_26391837_26392289_26392411_26392894_26393053_26410317
ES.30328.3	chr7	-	2411	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24741	-250	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	27.5947653438141	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATGTGTGTTTTTCAT	NA	False	NA	3	True	CATAAA	-41	NA	26410603	26364901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385794_26389739_26389834_26392894_26393056_26410317
ES.30328.30	chr7	-	3693	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24714	-330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.6871331963544	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATGTTTGGTGTCTT	NA	False	NA	-6	True	NA	NA	NA	26410576	26364981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378947_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26392411_26392894_26393053_26410317
ES.30328.31	chr7	-	3857	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24716	-331	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.5793110795194	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGATGTTTGGTGTCT	NA	False	NA	-7	True	NA	NA	NA	26410578	26364982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26392411_26392894_26393053_26410317
ES.30328.32	chr7	-	2059	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-333	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATGTTTGGTGT	NA	False	NA	-9	True	NA	NA	NA	26410604	26364984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
ES.30328.33	chr7	-	4480	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24698	-334	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	25.0643615961433	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGATGTTTGGTG	NA	False	NA	-10	True	NA	NA	NA	26410560	26364985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26379623_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26392411_26392894_26393053_26410317
ES.30328.34	chr7	-	3244	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24714	-382	intron_retention	FALSE	canonical	3	16	junction_8	19.8033542488684	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTACAGATTTGTCTAG	NA	False	NA	-58	True	NA	NA	NA	26410576	26365033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26410317
ES.30328.35	chr7	-	2244	3	Intergenic	novelGene_25032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	5.5	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTGTCTAATAGTCA	NA	False	NA	NA	False	NA	NA	NA	26410572	26390579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26392411_26392894_26393053_26410317
ES.30328.36	chr7	-	2601	1	Intergenic	novelGene_25033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAAATTCTAAAATCTG	NA	False	NA	NA	False	NA	NA	NA	26400752	26398151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26398200_26400800
ES.30328.37	chr7	-	5148	1	Intergenic	novelGene_25034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAACTGTCTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	26410632	26405484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26405500_26410600
ES.30328.4	chr7	-	2050	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-13755	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.8846831711525	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCATGTGTGTTTTTC	NA	False	NA	1	True	CATAAA	-39	NA	26399617	26364903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378947_26380739_26380890_26381021_26381185_26389739_26389834_26399388
ES.30328.5	chr7	-	2303	12	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24699	-253	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	23.6887531287189	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCATGTGTGTTTTT	NA	False	NA	0	True	CATAAA	-38	NA	26410561	26364904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26410317
ES.30328.6	chr7	-	2448	13	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24696	-253	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	22.5591814272297	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCATGTGTGTTTTT	NA	False	NA	0	True	CATAAA	-38	NA	26410558	26364904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26392289_26392411_26392894_26393053_26410317
ES.30328.7	chr7	-	2730	15	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24696	-255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.9602882561953	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATTCATGTGTGTTT	NA	False	NA	-2	True	CATAAA	-36	NA	26410558	26364906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26384744_26384898_26385684_26385816_26389739_26389834_26390877_26390954_26392289_26392411_26392894_26393053_26410317
ES.30328.8	chr7	-	2620	15	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24711	-255	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	25.1344344658552	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATTCATGTGTGTTT	NA	False	NA	-2	True	CATAAA	-36	NA	26410573	26364906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26390877_26390954_26391808_26391837_26392289_26392411_26392894_26393053_26410317
ES.30328.9	chr7	-	2313	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24787	-255	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	20.9334660293034	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATTCATGTGTGTTT	NA	False	NA	-2	True	CATAAA	-36	NA	26410649	26364906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26410317
ES.30329.1	chr7	+	180	1	Intergenic	novelGene_25035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	26802947	26803127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26802900_26803100
ES.3033.1	chr10	+	2873	2	Intergenic	novelGene_2370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGCTGACATTGCTGA	NA	False	NA	NA	False	NA	NA	NA	69167509	69170426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69169828_69169871
ES.30330.1	chr7	+	139	1	Intergenic	novelGene_25036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTATAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	26851255	26851394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26851300_26851400
ES.30331.1	chr7	-	181	1	Intergenic	novelGene_25037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	26854067	26853886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26853900_26854100
ES.30332.1	chr7	+	1611	9	FSM	ENSMUSG00000078787.10	ENSMUST00000108385.3	1631	9	17	3	17	-3	multi-exon	FALSE	canonical	1	2	junction_3	2.78107443266087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTAAACTTTTATTTCT	NA	False	NA	NA	False	AATACA	-15	NA	26854523	26858090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26854729_26855057_26855221_26855581_26855732_26855940_26856102_26856642_26856820_26856895_26857038_26857138_26857327_26857576_26857719_26857807
ES.30332.2	chr7	+	1436	8	NIC	ENSMUSG00000078787.10	novel	1631	9	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	2.96922995583236	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAACTTTTATTTCTTG	NA	False	NA	NA	False	AATACA	-17	NA	26854523	26858092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_26854729_26855057_26855221_26855581_26855732_26855940_26856102_26856895_26857038_26857138_26857327_26857576_26857719_26857807
ES.30333.1	chr7	+	4351	7	FSM	ENSMUSG00000078786.10_ENSMUSG00000080533.3	ENSMUST00000179391.8	1748	7	127	-2730	127	1395	multi-exon	FALSE	canonical	2	9	junction_1	4.48763733927875	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAGTTTTGAATGAG	NA	False	NA	NA	False	AATACA	-13	NA	26895332	26906475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ES.30333.2	chr7	+	1884	6	NNC	ENSMUSG00000078786.10	novel	7247	8	NA	NA	96	701	intron_retention	FALSE	non_canonical	0	0	junction_4	8.28492607088319	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTCTTCTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	26896643	26904446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26896792_26899978_26900124_26900444_26900570_26901832_26901962_26902051_26902123_26903180
ES.30333.3	chr7	+	6959	6	ISM	ENSMUSG00000078786.10	ENSMUST00000108379.8	7247	8	1452	1	110	-1	intron_retention	FALSE	canonical	2	9	junction_4	4.47213595499958	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTCTAATTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	26896657	26909610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ES.30333.4	chr7	+	1782	6	ISM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	1465	-701	123	701	3prime_fragment	FALSE	canonical	2	9	junction_4	4.47213595499958	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTCTTCTTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	26896670	26904446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ES.30333.5	chr7	+	2804	6	Fusion	ENSMUSG00000078786.10_ENSMUSG00000080533.3	novel	890	6	NA	NA	123	467	intron_retention	FALSE	canonical	1	1	junction_2	8.05977667184395	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCCTAACTTCTCCAT	NA	False	NA	16	True	AATAAA	-18	NA	26896670	26905547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_26896792_26899978_26900124_26900444_26900570_26901832_26901963_26902051_26902123_26903335
ES.30333.6	chr7	+	3878	6	NNC	ENSMUSG00000078786.10	novel	7247	8	NA	NA	132	2730	intron_retention	FALSE	canonical	1	1	junction_2	6.8585712797929	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGAGTTTTGAATGAG	NA	False	NA	NA	False	AATACA	-13	NA	26896679	26906475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26896792_26899978_26900124_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ES.30333.7	chr7	+	3567	2	NNC	ENSMUSG00000078786.10	novel	7247	8	NA	NA	1862	-1509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGTGTGTGTGTGTCC	NA	False	NA	NA	False	AATACA	-13	NA	26903918	26908102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26904353_26904969
ES.30334.1	chr7	+	2239	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-4341	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	28.6797944944677	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26928106	26957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26928320_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.10	chr7	+	2077	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6797944944677	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932614	26957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932666_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.11	chr7	+	2297	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	-19	-2	-19	1	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932618	26957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.12	chr7	+	2111	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.3108643742566	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTCTTTTCTCTCTGTG	NA	False	NA	19	True	AATAAA	-19	NA	26932627	26957372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932708_26932889_26932998_26933126_26933247_26933365_26933437_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.13	chr7	+	1410	10	NIC	ENSMUSG00000003762.14	novel	1987	13	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	31.6087189096792	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAACCTTAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	26932633	26943248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26942993
ES.30334.15	chr7	+	2353	15	NIC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	35.7688155138705	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932774	26957370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26950854_26951068_26951685_26951752_26956036_26956124_26956647
ES.30334.16	chr7	+	2124	14	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	340	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.4544308432565	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26933125	26957370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939471_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26950854_26951068_26951685_26951752_26956036_26956124_26956647
ES.30334.17	chr7	+	182	1	Intergenic	novelGene_25039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26947867	26948049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26947900_26948000
ES.30334.18	chr7	+	2771	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	-2	-9	-2	6	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGGTGTGTGCATAC	NA	False	NA	18	True	AATAAA	-27	NA	26958147	26981575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ES.30334.19	chr7	+	2755	10	NNC	ENSMUSG00000063160.13	novel	2760	10	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	28.5389056518022	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGTGTGTGCATACG	NA	False	NA	19	True	AATAAA	-28	NA	26958151	26981576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976345_26978928_26979052_26980178
ES.30334.2	chr7	+	2186	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	-9	4	-9	1	multi-exon	FALSE	canonical	3	74	junction_1	14.7544528041883	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932438	26957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.20	chr7	+	2697	11	NNC	ENSMUSG00000063160.13	novel	2760	10	NA	NA	10	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	28.5987761975928	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGGGAAATCAAGGTGT	NA	False	NA	10	True	AATAAA	-19	NA	26958159	26981567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178_26980644_26980697
ES.30334.21	chr7	+	2677	11	NNC	ENSMUSG00000063160.13	novel	2760	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	28.5987761975928	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAAATCAAGGTGTGT	NA	False	NA	12	True	AATAAA	-21	NA	26958192	26981569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178_26980644_26980686
ES.30334.22	chr7	+	2822	11	NIC	ENSMUSG00000063160.13	novel	2760	10	NA	NA	-8	9	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	36.359867986559	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTGTGTGCATACGAG	NA	False	NA	21	True	AATAAA	-30	NA	26958199	26981578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_26958387_26960432_26960533_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ES.30334.23	chr7	+	3702	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	55	-997	-3	994	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTATTTGTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	26958204	26982563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ES.30334.24	chr7	+	5906	9	FSM	ENSMUSG00000063160.13	ENSMUST00000134215.2	3153	9	-2594	-159	1	-1	multi-exon	FALSE	canonical	3	70	junction_3	12.1320855585509	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACTGGGAAATCAAGGT	NA	False	NA	8	True	AATAAA	-17	NA	26958208	26981565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ES.30334.25	chr7	+	2175	7	NNC	ENSMUSG00000063160.13	novel	8511	8	NA	NA	5342	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.1935126597692	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACTGGGAAATCAAGGT	NA	False	NA	8	True	AATAAA	-17	NA	26966144	26981565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178_26980644_26980697
ES.30334.26	chr7	+	1462	3	NNC	ENSMUSG00000063160.13	novel	2760	10	NA	NA	18121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	9	True	AATAAA	-18	NA	26978923	26981566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26979052_26980178_26980644_26980697
ES.30334.3	chr7	+	3990	23	Fusion	ENSMUSG00000063160.13_ENSMUSG00000003762.14	novel	2181	15	NA	NA	-5	6	multi-exon	FALSE	canonical	0	0	junction_14	23.5712827801294	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGGTGTGTGCATAC	NA	False	NA	18	True	AATAAA	-27	NA	26932442	26981575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ES.30334.4	chr7	+	2025	14	NNC	ENSMUSG00000003762.14	novel	2181	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.5663515560238	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTTCTTTTCTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	26932452	26957370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932599_26932889_26932994_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.5	chr7	+	2616	15	NNC	ENSMUSG00000003762.14	novel	2181	15	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	28.0885080720619	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTTCTCTCTGTGCT	NA	False	NA	21	True	AATAAA	-21	NA	26932484	26957374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956219_26956269
ES.30334.6	chr7	+	2021	15	NNC	ENSMUSG00000003762.14	novel	2181	15	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	27.8637354836361	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCCAGTTCTTTTCTCT	NA	False	NA	14	True	AATAAA	-14	NA	26932494	26957367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956752
ES.30334.7	chr7	+	2090	15	NNC	ENSMUSG00000003762.14	novel	2181	15	NA	NA	69	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.0109057607863	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCCCAGTTCTTTTC	NA	False	NA	11	True	AATAAA	-11	NA	26932516	26957364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949722_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30334.9	chr7	+	2047	15	NNC	ENSMUSG00000003762.14	novel	2276	14	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.6797944944677	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTCTTTTCTCTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	26932614	26957371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_26932636_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ES.30335.1	chr7	-	2789	12	Fusion	ENSMUSG00000058709.12_ENSMUSG00000053291.16	novel	2107	6	NA	NA	5	3	multi-exon	FALSE	canonical	2	7	junction_5	201.262995576509	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTCCTCTCTGTAA	NA	False	NA	0	True	AATAAA	-23	NA	26878308	26858079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.10	chr7	-	2030	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	236.777194847815	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26865752	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865709
ES.30335.11	chr7	-	1926	5	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	218.662268121411	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866184	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26858637_26858948_26859017_26859712_26859833_26864044_26865154_26866108
ES.30335.12	chr7	-	1563	5	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	253.988557813142	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866184	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859712_26859833_26864407_26865154_26866108
ES.30335.13	chr7	-	2422	5	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	48	0	intron_retention	FALSE	canonical	3	451	junction_4	62.162589231788	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866179	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26858637_26858948_26859017_26859211_26859833_26864044_26865154_26866108
ES.30335.14	chr7	-	1977	7	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	216.296863900828	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866219	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26864287_26864407_26865154_26866108
ES.30335.15	chr7	-	1867	7	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	216.296863900828	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866209	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26864187_26864407_26865154_26866108
ES.30335.16	chr7	-	2086	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	236.777194847815	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866185	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865176_26866108
ES.30335.18	chr7	-	2629	2	ISM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	4813	-328	-729	-1	intron_retention	FALSE	canonical	3	589	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACACTTGTATTCCTCTC	NA	False	NA	-5	True	AATAAA	-18	NA	26861025	26858084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_26858637_26858948
ES.30335.2	chr7	-	2091	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	17	-1	17	1	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTATTCCTCTCTGT	NA	False	NA	-2	True	AATAAA	-21	NA	26866210	26858081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ES.30335.20	chr7	-	2155	7	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	270.143583221137	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACACTTGTATTCCTCT	NA	False	NA	-6	True	AATAAA	-17	NA	26866200	26858085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26862031_26862110_26864044_26865154_26866108
ES.30335.21	chr7	-	6266	5	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	49	-3	intron_retention	FALSE	canonical	3	451	junction_4	64.6915759585435	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACACACTTGTATTCCTC	NA	False	NA	-7	True	AATAAA	-16	NA	26866178	26858086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26865154_26866108
ES.30335.22	chr7	-	2060	5	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	41	-6	intron_retention	FALSE	canonical	0	0	junction_3	246.469445367981	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCACACACTTGTATTC	NA	False	NA	-10	True	AATAAA	-13	NA	26866186	26858089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859833_26864407_26865154_26866108
ES.30335.23	chr7	-	3099	12	Fusion	ENSMUSG00000058709.12_ENSMUSG00000053291.16	novel	2107	6	NA	NA	392	-7	multi-exon	FALSE	canonical	0	0	junction_11	260.752090869013	651	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGCACACACTTGTATT	NA	False	NA	-11	True	AATAAA	-12	NA	26877843	26858090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26877365
ES.30335.24	chr7	-	1500	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	-125	-3	-44	0	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878365	26867848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
ES.30335.25	chr7	-	1247	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	-55	0	-55	0	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878376	26867848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.26	chr7	-	2643	8	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	425	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	249.378574599719	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26877810	26867848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26876189
ES.30335.27	chr7	-	1116	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	265.286270951882	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878308	26867848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26875203_26875319_26875582_26875664_26878151
ES.30335.28	chr7	-	1257	9	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	312.886061530392	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878303	26867849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26868230_26871237_26871322_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.29	chr7	-	1154	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	-44	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGCCTCTGTCATTCT	NA	False	NA	-2	True	CATAAA	-18	NA	26878365	26867849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
ES.30335.3	chr7	-	3056	11	Fusion	ENSMUSG00000058709.12_ENSMUSG00000093348.3_ENSMUSG00000053291.16	novel	2107	6	NA	NA	-1	0	intron_retention	FALSE	canonical	2	7	junction_5	209.967140286284	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26878314	26858082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
ES.30335.31	chr7	-	2587	7	NIC	ENSMUSG00000053291.16	novel	1372	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	268.133465937312	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26878300	26867850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26876818_26878151
ES.30335.32	chr7	-	3709	8	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	253.437993060493	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26878321	26867850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26870749_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.33	chr7	-	1221	9	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	311.375351264354	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26878307	26867850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26868230_26869504_26869550_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.35	chr7	-	1272	9	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.534064138173	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26878303	26867850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26868230_26871815_26871916_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.36	chr7	-	2721	7	ISM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	957	2	871	0	3prime_fragment	FALSE	canonical	3	670	junction_1	27.871231683504	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGGCCTCTGTCATTC	NA	False	NA	-3	True	CATAAA	-17	NA	26877364	26867850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582
ES.30335.37	chr7	-	3927	8	NNC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.786588796692	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCGGCCTCTGTCAT	NA	False	NA	-5	True	CATAAA	-15	NA	26878308	26867852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26870982_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ES.30335.38	chr7	-	3532	6	ISM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	325	3	320	-3	3prime_fragment	FALSE	canonical	3	670	junction_1	25.3171878375147	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTTCGGCCTCTGTC	NA	False	NA	-7	True	CATAAA	-13	NA	26877915	26867854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203
ES.30335.39	chr7	-	2442	2	NNC	ENSMUSG00000053291.16	novel	949	7	NA	NA	2843	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTTCGGCCTCTGT	NA	False	NA	-8	True	CATAAA	-12	NA	26871041	26867855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26868693_26869436
ES.30335.4	chr7	-	2221	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	-136	-329	-136	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26865974	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
ES.30335.41	chr7	-	1777	1	NIC	ENSMUSG00000053291.16	novel	379	3	NA	NA	313	-893	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26877922	26876145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26876100_26877900
ES.30335.42	chr7	-	4240	1	Genic_Genomic	ENSMUSG00000095538.2_ENSMUSG00000089661.10_ENSMUSG00000053291.16	novel	NA	NA	NA	NA	19	-1041	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTGAGCCCAGTA	NA	False	NA	NA	False	NA	NA	NA	26880533	26876293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_26876300_26880500
ES.30335.44	chr7	-	2929	12	Fusion	ENSMUSG00000061479.16_ENSMUSG00000089661.10	novel	1365	7	NA	NA	9	0	multi-exon	FALSE	canonical	0	0	junction_4	1013.56347883092	633	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTCTCTTTGGTTTT	NA	False	NA	-2	True	AATACA	-16	NA	26895569	26879168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346_26880419_26885750_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26891511_26892114_26892294_26892468_26894868_26894982_26895415
ES.30335.46	chr7	-	1295	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	73	-3	-45	1	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTCTGCTTTATTTT	NA	False	NA	-5	True	ATTAAA	-29	NA	26895623	26886428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ES.30335.49	chr7	-	1297	6	NNC	ENSMUSG00000061479.16	novel	1288	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	888.109227516526	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895180	26886431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891220_26892294_26892468_26894868
ES.30335.5	chr7	-	3017	5	ISM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	44	1	44	0	intron_retention	FALSE	canonical	3	566	junction_4	16.7984374273323	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866183	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044
ES.30335.50	chr7	-	1124	6	NIC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	920.819113615698	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895568	26886431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26895415
ES.30335.51	chr7	-	3639	6	NIC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	1453	junction_5	345.589004454714	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895569	26886431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26894982_26895415
ES.30335.52	chr7	-	1765	7	NIC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	9	0	intron_retention	FALSE	canonical	2	8	junction_5	1030.89712817957	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895569	26886431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26886790_26888290_26888958_26891028_26891206_26892294_26892468_26893506_26893630_26894868_26894982_26895415
ES.30335.53	chr7	-	3308	6	NIC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	1453	junction_5	342.815052178285	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895568	26886431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26886790_26888290_26888380_26888783_26891206_26892294_26892468_26894868_26894982_26895415
ES.30335.55	chr7	-	1261	7	NNC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_4	813.212713050323	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTGTCTGCTTTA	NA	False	NA	-9	True	ATTAAA	-25	NA	26895602	26886432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891197_26892294_26892468_26894868_26894982_26895415
ES.30335.6	chr7	-	1770	6	NNC	ENSMUSG00000058709.12	novel	1756	6	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.894750746634	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26865886	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864407_26865154_26865740
ES.30335.7	chr7	-	1714	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	232.127206505399	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26866198	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864407_26865154_26866108
ES.30335.8	chr7	-	7253	10	Fusion	ENSMUSG00000058709.12_ENSMUSG00000093348.3_ENSMUSG00000053291.16	novel	2107	6	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_4	220.942649393429	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26878300	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26865154_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
ES.30335.9	chr7	-	2253	5	NIC	ENSMUSG00000058709.12	novel	1756	6	NA	NA	27	0	intron_retention	FALSE	canonical	3	45	junction_4	233.356353031153	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTGTATTCCTCTCT	NA	False	NA	-4	True	AATAAA	-19	NA	26865811	26858083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26858637_26858948_26859349_26859712_26859833_26864044_26865154_26865740
ES.30336.1	chr7	-	209	1	Antisense	novelGene_ENSMUSG00000078786.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	26896535	26896326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_26896300_26896500
ES.30337.1	chr7	-	3243	1	Genic_Genomic	ENSMUSG00000003752.10	novel	NA	NA	NA	NA	4961	2323	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGGAATAAATTTAGGG	NA	False	NA	NA	False	NA	NA	NA	26907516	26904273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_26904300_26907500
ES.30337.2	chr7	-	5326	7	NIC	ENSMUSG00000003752.10	novel	3247	7	NA	NA	13	2090	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.0847560383193	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGAGGGGTTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	26928040	26904506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26907870_26911734_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
ES.30337.3	chr7	-	2549	1	Genic_Genomic	ENSMUSG00000003752.10	novel	NA	NA	NA	NA	4961	1629	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCCAAACTCACAGATCA	NA	False	NA	NA	False	NA	NA	NA	26907516	26904967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_26905000_26907500
ES.30337.5	chr7	-	3779	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	-532	0	-499	0	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	False	NA	-2	True	AATAAA	-15	NA	26928585	26906596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
ES.30337.6	chr7	-	4940	1	NIC	ENSMUSG00000003752.10	novel	3247	7	NA	NA	941	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	False	NA	-2	True	AATAAA	-15	NA	26911536	26906596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_26906600_26911500
ES.30338.1	chr7	-	174	1	Intergenic	novelGene_25038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTATTAGTG	NA	False	NA	NA	False	NA	NA	NA	26947271	26947097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26947100_26947300
ES.30339.1	chr7	-	281	1	Intergenic	novelGene_25040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATCTATCTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	26948514	26948233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26948200_26948500
ES.30339.2	chr7	-	175	1	Intergenic	novelGene_25041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAAGCAGGGCCAACTG	NA	False	NA	NA	False	NA	NA	NA	26948514	26948339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_26948300_26948500
ES.3034.1	chr10	+	2717	1	Antisense	novelGene_ENSMUSG00000019942.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGCCAAAGCGGTAGGA	2617	False	NA	NA	False	NA	NA	NA	69174370	69177087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_69174400_69177100
ES.30340.1	chr7	+	177	1	Intergenic	novelGene_25042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATCATCAAAGAAAA	NA	False	NA	10	True	NA	NA	NA	26995022	26995199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_26995000_26995200
ES.30341.1	chr7	+	177	1	Intergenic	novelGene_25043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	27000843	27001020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27000800_27001000
ES.30342.1	chr7	+	647	1	Antisense	novelGene_ENSMUSG00000040488.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27008739	27009386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_27008700_27009400
ES.30343.1	chr7	+	174	1	Intergenic	novelGene_25045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	27014525	27014699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27014500_27014700
ES.30344.1	chr7	-	5285	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	-160	-7	-160	3	multi-exon	FALSE	canonical	3	195	junction_24	119.840530186521	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCCTTTTTCTTT	NA	False	NA	1	True	ATTAAA	-23	NA	27033248	27004557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.10	chr7	-	2096	9	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-593	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	184.947289788199	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27010696	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27010313
ES.30344.100	chr7	-	2040	9	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	11182	2178	11182	-616	internal_fragment	FALSE	canonical	3	315	junction_4	88.7468309293352	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTAAACTTGGAGACTT	NA	False	NA	NA	False	NA	NA	NA	27021856	27007600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713
ES.30344.101	chr7	-	3810	25	NNC	ENSMUSG00000040488.19	novel	3643	23	NA	NA	1329	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	126.657503780427	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCCAGTTTGTAACTC	NA	False	NA	NA	False	NA	NA	NA	27035788	27010983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27011238_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034821_27034961_27035077_27035137_27035526
ES.30344.102	chr7	-	3681	23	FSM	ENSMUSG00000040488.19	ENSMUST00000206413.2	3643	23	-38	0	-23	0	multi-exon	FALSE	canonical	2	4	junction_1	89.041092287227	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCCAGTTTGTAACT	NA	False	NA	NA	False	NA	NA	NA	27033111	27010984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27011238_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.103	chr7	-	4285	25	NNC	ENSMUSG00000040488.19	novel	3643	23	NA	NA	19	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	138.259210814325	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTGCCAGTTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	27037098	27010985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27011238_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022352_27022572_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.104	chr7	-	3627	23	NNC	ENSMUSG00000040488.19	novel	3643	23	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_11	122.138960286367	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTGCCAGTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	27033047	27010986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27011238_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024707_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.105	chr7	-	2486	4	ISM	ENSMUSG00000040488.19	ENSMUST00000206413.2	3643	23	11445	778	11410	-778	internal_fragment	FALSE	canonical	3	355	junction_1	15.1730755689881	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGGCCCTGTAATCAATC	NA	False	NA	NA	False	NA	NA	NA	27021628	27011762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27013809_27018835_27018962_27019049_27019182_27021446
ES.30344.106	chr7	-	4390	23	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	11	-783	intron_retention	FALSE	canonical	0	0	junction_1	89.6514946661112	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATACACGGCCCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	27033062	27011767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27012779_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.107	chr7	-	5572	12	NIC	ENSMUSG00000040488.19	novel	3643	23	NA	NA	5305	-1024	intron_retention	FALSE	canonical	3	315	junction_7	30.7683963650372	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTAGGTATGTATAGT	NA	False	NA	NA	False	NA	NA	NA	27027733	27012008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27026038_27026116_27026938_27027062_27027213_27027610
ES.30344.108	chr7	-	2428	1	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	-4364	-1055	mono-exon	FALSE	NA	NA	NA	NA	NA	627	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27014467	27012039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27012000_27014500
ES.30344.109	chr7	-	179	1	Intergenic	novelGene_25044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTATAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27014477	27014298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27014300_27014500
ES.30344.11	chr7	-	5490	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	12	0	intron_retention	FALSE	canonical	3	195	junction_23	121.224508155534	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033061	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.12	chr7	-	5263	29	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	2789	0	intron_retention	FALSE	canonical	0	0	junction_28	136.303359706747	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27030249	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27030194
ES.30344.13	chr7	-	2815	6	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	7	0	intron_retention	FALSE	canonical	3	517	junction_3	62.7107646261788	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27010096	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27008840_27009605_27009678_27009945
ES.30344.14	chr7	-	5268	29	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-1241	0	intron_retention	FALSE	canonical	3	16	junction_15	148.052941441188	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27034329	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261
ES.30344.15	chr7	-	5356	22	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5271	0	intron_retention	FALSE	canonical	0	0	junction_17	138.260738266623	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27027767	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27024888_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.17	chr7	-	3999	24	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5281	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	134.535214749007	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27027757	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026167_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.19	chr7	-	5216	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-11	0	intron_retention	FALSE	canonical	3	195	junction_23	121.491722024211	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033099	27004564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.2	chr7	-	5098	30	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	134.457371609086	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCTGCCTTTTTCT	NA	False	NA	-1	True	ATTAAA	-21	NA	27037136	27004559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27036852
ES.30344.21	chr7	-	6125	31	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	26	junction_30	163.229763081233	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27037126	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.23	chr7	-	5364	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	173.865968492975	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27037116	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008718_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.24	chr7	-	4599	22	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5293	-1	intron_retention	FALSE	canonical	3	305	junction_13	107.620396114602	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27027745	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27027213_27027610
ES.30344.26	chr7	-	5997	27	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	195	junction_21	124.549965022003	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27033053	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.27	chr7	-	5265	31	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1431	-1	intron_retention	FALSE	canonical	0	0	junction_6	164.907546488597	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27035686	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008814_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.28	chr7	-	5385	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1322	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_32	159.645102003632	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27035795	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.29	chr7	-	4970	30	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_1	133.494066811823	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27033040	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004877_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.3	chr7	-	5417	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-9	0	intron_retention	FALSE	canonical	3	195	junction_24	119.697679337469	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGCCTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	27033047	27004560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.30	chr7	-	5066	30	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_4	135.010582224961	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27033063	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007320_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.31	chr7	-	4929	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	9	junction_8	139.296789852693	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGGCCTCTGCCTGCCT	NA	False	NA	-7	True	ATTAAA	-15	NA	27033047	27004565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.32	chr7	-	5384	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1316	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	170.080377942129	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27035801	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023724_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.33	chr7	-	5055	29	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	136.615037120176	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033037	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008807_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.34	chr7	-	3989	24	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5281	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	154.880245219228	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027757	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026167_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.36	chr7	-	5619	32	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_15	171.206510082686	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27037099	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022617_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.38	chr7	-	4387	21	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5281	0	intron_retention	FALSE	canonical	3	9	junction_8	139.418040439536	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027757	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.4	chr7	-	5359	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_16	168.455202571596	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGCCTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	27037098	27004560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.40	chr7	-	4289	22	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5823	0	intron_retention	FALSE	non_canonical	0	0	junction_6	157.23730206601	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027215	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008834_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062
ES.30344.41	chr7	-	5813	31	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1316	0	intron_retention	FALSE	canonical	3	14	junction_30	164.096462146168	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27035801	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.42	chr7	-	5607	29	FSM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-25	-856	10	0	multi-exon	FALSE	canonical	3	195	junction_23	117.369222706702	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033063	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.43	chr7	-	5110	21	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5281	0	intron_retention	FALSE	canonical	2	8	junction_9	163.199410231778	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027757	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013718_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.44	chr7	-	6181	27	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	-9	0	intron_retention	FALSE	canonical	3	195	junction_22	123.031337711868	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033047	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.45	chr7	-	5179	21	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5273	0	intron_retention	FALSE	canonical	3	305	junction_13	106.433829208574	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027765	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27024687_27025102_27025229_27025911_27026038_27026116_27026938_27027062_27027213_27027610
ES.30344.47	chr7	-	5971	29	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_18	140.044471799613	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033046	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27024888_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.49	chr7	-	5407	29	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	195	junction_24	118.881409567755	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033071	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029744_27032779
ES.30344.5	chr7	-	3077	11	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	11462	0	intron_retention	FALSE	canonical	3	315	junction_7	112.187387882952	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGCCTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	27021576	27004560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446
ES.30344.50	chr7	-	5365	16	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	6940	0	intron_retention	FALSE	canonical	3	305	junction_11	90.8423298297049	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27026098	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102
ES.30344.51	chr7	-	4520	25	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_22	141.335495266484	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27033072	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026956_27028977_27029244_27029551_27029744_27032779
ES.30344.53	chr7	-	4301	22	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5280	0	intron_retention	FALSE	canonical	3	9	junction_8	137.404380275233	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027758	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.57	chr7	-	3165	16	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	9497	0	intron_retention	FALSE	canonical	0	0	junction_9	187.046803412052	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27023541	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27015554_27015665_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511
ES.30344.58	chr7	-	7059	28	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1331	0	intron_retention	FALSE	canonical	3	14	junction_27	173.580505944348	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27035786	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27026938_27027062_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.59	chr7	-	4932	29	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	2806	0	intron_retention	FALSE	canonical	0	0	junction_28	136.515169785752	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27030232	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27030194
ES.30344.6	chr7	-	5398	33	FSM	ENSMUSG00000040488.19	ENSMUST00000038618.13	5386	33	-12	0	-12	0	multi-exon	FALSE	canonical	3	26	junction_32	158.898146917294	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGCCTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	27037129	27004560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.61	chr7	-	5073	22	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5292	0	intron_retention	FALSE	canonical	3	305	junction_13	106.347993359583	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027746	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27024687_27025102_27025229_27025911_27026038_27026116_27026938_27027062_27027213_27027610
ES.30344.62	chr7	-	4067	24	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	5280	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_21	133.265628683017	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27027758	27004566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026667_27026938_27027062_27027213_27027610
ES.30344.63	chr7	-	4420	23	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5281	-1	intron_retention	FALSE	canonical	1	1	junction_6	132.713822481631	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027757	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008814_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.64	chr7	-	6187	26	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	7	-1	intron_retention	FALSE	canonical	2	8	junction_9	145.208815159411	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27033031	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013718_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.65	chr7	-	3809	22	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5292	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	179.789559525256	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027746	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27026685_27026938_27027023_27027213_27027610
ES.30344.66	chr7	-	6565	30	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1331	-1	intron_retention	FALSE	canonical	3	14	junction_29	177.627909398788	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27035786	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.67	chr7	-	5115	29	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	8	junction_9	139.4364568906	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27033092	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013718_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.68	chr7	-	3281	5	FSM	ENSMUSG00000040488.19	ENSMUST00000148594.8	867	5	3	-2417	3	-1	multi-exon	FALSE	canonical	3	513	junction_1	17.7200451466693	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27010100	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945
ES.30344.69	chr7	-	5828	32	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	67	-1	intron_retention	FALSE	canonical	3	26	junction_31	156.846213379236	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27037050	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.7	chr7	-	4081	24	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5291	-2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_22	133.748133919813	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCCTCTGCCTGCCTTTT	NA	False	NA	-4	True	ATTAAA	-18	NA	27027747	27004562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027023_27027213_27027610
ES.30344.70	chr7	-	5291	32	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	155.870700704749	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27037099	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034821_27034961_27035077_27035137_27036812
ES.30344.71	chr7	-	6436	26	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-153	-1	intron_retention	FALSE	canonical	3	195	junction_22	121.380393803942	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27033241	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029744_27032779
ES.30344.73	chr7	-	4739	21	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5293	-1	intron_retention	FALSE	canonical	3	309	junction_18	106.219395592331	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027745	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.74	chr7	-	3935	5	NIC	ENSMUSG00000040488.19	novel	4726	29	NA	NA	7	-1	intron_retention	FALSE	canonical	3	527	junction_2	66.3112924018225	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27010096	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27005645_27005986_27008493_27008710_27008840_27009605_27009678_27009945
ES.30344.75	chr7	-	5105	30	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	2894	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	134.457371609086	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27030144	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27029845
ES.30344.77	chr7	-	5877	31	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	26	junction_30	163.959087037658	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27037129	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.8	chr7	-	6099	31	NIC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	19	-2	intron_retention	FALSE	canonical	3	26	junction_30	163.336938735718	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCCTCTGCCTGCCTTTT	NA	False	NA	-4	True	ATTAAA	-18	NA	27037098	27004562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027776_27028164_27028288_27028392_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ES.30344.80	chr7	-	5378	28	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	2796	-1	intron_retention	FALSE	canonical	0	0	junction_27	138.513091595018	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27030242	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27030194
ES.30344.81	chr7	-	4870	22	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5292	-1	intron_retention	FALSE	canonical	0	0	junction_21	138.455883753749	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027746	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026938_27027062_27027211_27027610
ES.30344.82	chr7	-	4956	30	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	2694	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	134.457371609086	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27030344	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27030194
ES.30344.83	chr7	-	4505	27	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_5	130.00760105225	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27033060	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27013775_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.84	chr7	-	4464	23	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5281	-1	intron_retention	FALSE	canonical	3	5	junction_21	135.936452095325	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27027757	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026956_27027062_27027213_27027610
ES.30344.85	chr7	-	5093	30	NNC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	5	junction_22	137.50412381666	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27033048	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026956_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.86	chr7	-	6004	31	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1337	-1	intron_retention	FALSE	canonical	3	14	junction_30	173.204057560888	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCGGCCTCTGCCTGC	NA	False	NA	-9	True	ATTAAA	-13	NA	27035780	27004567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023726_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028907_27028995_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.88	chr7	-	5389	33	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	162.695648446532	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTCGGCCTCTGCCTG	NA	False	NA	-10	True	ATTAAA	-12	NA	27037098	27004568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034951_27035077_27035137_27036812
ES.30344.89	chr7	-	4042	24	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	5296	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	151.710138005128	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTTTCGGCCTCTGCCT	NA	False	NA	-11	True	ATTAAA	-11	NA	27027742	27004569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009951_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026667_27026938_27027062_27027213_27027610
ES.30344.9	chr7	-	5481	32	NNC	ENSMUSG00000040488.19	novel	5386	33	NA	NA	1315	1	intron_retention	FALSE	canonical	3	14	junction_31	162.166093346993	736	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGCCTCTGCCTGCCTTT	NA	False	NA	-5	True	ATTAAA	-17	NA	27035802	27004563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27035526
ES.30344.92	chr7	-	4980	30	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-9	-7	intron_retention	FALSE	canonical	0	0	junction_8	137.697232880422	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTACTTTCGGCCTCT	NA	False	NA	-15	True	ATTAAA	-7	NA	27033047	27004573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010125_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.93	chr7	-	3968	22	NIC	ENSMUSG00000040488.19	novel	4726	29	NA	NA	5280	172	intron_retention	FALSE	canonical	3	305	junction_12	105.167698928707	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCTGTAGATGTTATT	NA	False	NA	NA	False	AAAAAG	-45	NA	27027758	27005250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610
ES.30344.94	chr7	-	5117	29	FSM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-222	-169	-172	169	multi-exon	FALSE	canonical	3	195	junction_23	117.369222706702	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAATCCTGTAGATGTT	NA	False	NA	NA	False	AAAAAG	-42	NA	27033260	27005253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.95	chr7	-	4765	29	FSM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-44	5	6	-5	multi-exon	FALSE	canonical	3	195	junction_23	117.369222706702	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAAGAAAGAACCTCAT	NA	False	NA	NA	False	AATAAA	-30	NA	27033082	27005427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.96	chr7	-	4752	29	NNC	ENSMUSG00000040488.19	novel	4726	29	NA	NA	10	-17	intron_retention	FALSE	canonical	2	7	junction_20	134.904477732375	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGATCAGGAACCTCCAAG	NA	False	NA	NA	False	AATAAA	-18	NA	27033063	27005439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026667_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.98	chr7	-	4683	27	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-35	1245	0	317	5prime_fragment	FALSE	canonical	3	195	junction_21	97.5971674824209	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACGTCTTTGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	27033073	27006667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30344.99	chr7	-	4344	27	ISM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	-9	1558	-9	4	5prime_fragment	FALSE	canonical	3	195	junction_21	97.5971674824209	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCTGTGAGACACTCCA	NA	False	NA	NA	False	ATTAAA	-26	NA	27033047	27006980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ES.30345.1	chr7	+	232	1	Intergenic	novelGene_25046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	27076652	27076884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27076700_27076900
ES.30346.1	chr7	+	172	1	Intergenic	novelGene_25048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	487	False	NA	NA	False	NA	NA	NA	27130874	27131046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27130900_27131000
ES.30347.1	chr7	+	177	1	Intergenic	novelGene_25049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAGAAAGAA	4402	False	NA	NA	False	NA	NA	NA	27137982	27138159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27138000_27138200
ES.30348.1	chr7	+	177	1	Intergenic	novelGene_25050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	7563	False	NA	NA	False	NA	NA	NA	27141143	27141320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27141100_27141300
ES.30349.1	chr7	+	182	1	Intergenic	novelGene_25051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	8544	False	NA	NA	False	NA	NA	NA	27142124	27142306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27142100_27142300
ES.3035.1	chr10	-	4379	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	-4	0	-4	0	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGACTTAAGCAGATGTTT	NA	False	NA	4	True	AATAAA	-23	NA	69188772	69170975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.10	chr10	-	4435	6	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-5	21	intron_retention	FALSE	canonical	3	2056	junction_1	103.143395329027	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCACTGTGGTGGCTGTT	NA	False	NA	-7	True	AATATA	-18	NA	69188745	69174132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69182062_69185925_69185989_69188665
ES.3035.11	chr10	-	1091	8	NNC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-3	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	781.149048987896	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCACTGTGGTGGCTGTT	NA	False	NA	-7	True	AATATA	-18	NA	69188743	69174132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_69174427_69176310_69176418_69176611_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.14	chr10	-	4592	6	NNC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	1881	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	868.048754391134	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCACTGTGGTGGCTGTT	NA	False	NA	-7	True	AATATA	-18	NA	69184779	69174132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181424_69181491
ES.3035.16	chr10	-	1250	8	NNC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-5	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.523603518885	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188745	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181847_69182062_69185925_69185989_69188665
ES.3035.17	chr10	-	5056	7	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-4	19	intron_retention	FALSE	canonical	3	2056	junction_1	85.7173974302896	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188744	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69185989_69188665
ES.3035.18	chr10	-	3851	7	ISM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	7	-19	7	19	intron_retention	FALSE	canonical	3	2056	junction_1	108.064795377588	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188726	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925
ES.3035.19	chr10	-	7406	6	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-4	19	intron_retention	FALSE	canonical	3	2056	junction_1	78.821316913637	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188744	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69181015_69181904_69185989_69188665
ES.3035.2	chr10	-	4080	1	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	3504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGACTTAAGCAGATGTTT	NA	False	NA	4	True	AATAAA	-23	NA	69175055	69170975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69171000_69175100
ES.3035.20	chr10	-	1239	7	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	34	19	intron_retention	FALSE	canonical	3	2056	junction_1	109.808419025541	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188699	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.21	chr10	-	3077	7	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-5	19	intron_retention	FALSE	canonical	3	2087	junction_3	84.3102735271463	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69188745	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.24	chr10	-	6444	3	FSM	ENSMUSG00000019942.14	ENSMUST00000123458.2	378	3	-3772	-2294	-991	19	multi-exon	FALSE	canonical	3	2242	junction_1	8	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCACTGTGGTGGCTG	NA	False	NA	-9	True	AATATA	-16	NA	69182331	69174134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_69176453_69176544_69176709_69178369
ES.3035.25	chr10	-	1139	8	NNC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	31	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	789.222531407735	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCACTGTGGTGGCT	NA	False	NA	-10	True	AATATA	-15	NA	69188702	69174135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_69174417_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.26	chr10	-	2081	7	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-5	17	intron_retention	FALSE	canonical	3	2056	junction_1	110.037367390456	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGTCACTGTGGTGGC	NA	False	NA	-11	True	AATATA	-14	NA	69188745	69174136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69182062_69185925_69185989_69188665
ES.3035.27	chr10	-	3408	1	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-4	-4502	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCTTTACGGATAACCT	NA	False	NA	NA	False	AAAAAG	-4	NA	69188744	69185336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69185300_69188700
ES.3035.3	chr10	-	2899	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	23	1453	-5	-1453	multi-exon	FALSE	canonical	3	2056	junction_1	102.156542539739	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGGTCTCAGCCCCT	NA	False	NA	NA	False	AATAGA	-20	NA	69188745	69172428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.4	chr10	-	1296	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	-28	3107	-28	71	multi-exon	FALSE	canonical	3	2056	junction_1	102.156542539739	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAAGACTTGAGTCTCC	NA	False	NA	43	True	NA	NA	NA	69188796	69174082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.5	chr10	-	6249	6	NIC	ENSMUSG00000019942.14	novel	1253	9	NA	NA	-3	50	intron_retention	FALSE	canonical	3	2056	junction_1	102.183364595222	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAGTGTTAATTACTA	NA	False	NA	22	True	NA	NA	NA	69188743	69174103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69181015_69181904_69182062_69185925
ES.3035.7	chr10	-	3548	7	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	-4	25	intron_retention	FALSE	canonical	3	2056	junction_1	94.16725663532	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGGTGGCTGTTAATT	NA	False	NA	-3	True	AATATA	-22	NA	69188744	69174128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69181015_69181904_69182062_69185925_69185989_69188665
ES.3035.9	chr10	-	2035	8	NNC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	8	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	781.523603518885	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTGGCTGTTAAT	NA	False	NA	-4	True	AATATA	-21	NA	69188760	69174129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181424_69181491_69182062_69185925_69185989_69188665
ES.30350.1	chr7	-	2347	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	23	-12	23	12	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGTTCGGTTTTTGT	NA	False	NA	-16	True	AATAAA	-29	NA	27055421	27041545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.10	chr7	-	2215	17	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	117.160080125442	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATAGTCTTGGTTTGT	NA	False	NA	-27	True	AATAAA	-18	NA	27055416	27041556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051497_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.12	chr7	-	2696	16	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-14	-2	intron_retention	FALSE	canonical	0	0	junction_9	90.5249873423539	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTATAGTCTTGGTT	NA	False	NA	-30	True	AATAAA	-15	NA	27055393	27041559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.13	chr7	-	2788	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	272	junction_4	30.5955853637416	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTATAGTCTTGGTT	NA	False	NA	-30	True	AATAAA	-15	NA	27055394	27041559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.14	chr7	-	2434	19	Fusion	ENSMUSG00000089832.9_ENSMUSG00000011751.17	novel	2358	18	NA	NA	-3786	1	multi-exon	FALSE	canonical	1	1	junction_17	105.271606386105	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTATAGTCTTGGT	NA	False	NA	-31	True	AATAAA	-14	NA	27059230	27041560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27056710_27056876_27059167
ES.30350.15	chr7	-	2132	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055393	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.16	chr7	-	1858	15	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-13	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_9	93.2383658004732	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055392	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.17	chr7	-	2006	14	NNC	ENSMUSG00000089832.9	novel	2412	17	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	93.8076213454174	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055394	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27055360
ES.30350.18	chr7	-	2251	16	NIC	ENSMUSG00000089832.9	novel	2412	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	8	junction_5	88.1775985661261	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055386	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
ES.30350.20	chr7	-	2650	16	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_7	90.4560298340212	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055374	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.21	chr7	-	2168	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	88.0921924747023	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055349	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.23	chr7	-	1175	6	FSM	ENSMUSG00000089832.9	ENSMUST00000148933.8	1140	6	-34	-1	-34	0	multi-exon	FALSE	canonical	3	25	junction_5	134.483604948707	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27045061	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27044841
ES.30350.24	chr7	-	2298	18	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.5178404665499	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055394	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048041_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.25	chr7	-	1416	10	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	110.896348001185	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055444	27041561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27054671_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.29	chr7	-	3222	16	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-16	0	intron_retention	FALSE	canonical	3	272	junction_3	31.5625657315047	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTGTTTATAGTCTTG	NA	False	NA	-33	True	AATAAA	-12	NA	27055395	27041562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042847_27044064_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ES.30350.3	chr7	-	2440	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-16	5	intron_retention	FALSE	canonical	3	272	junction_5	30.165623543199	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTCTTGGTTTGTTCGG	NA	False	NA	-23	True	AATAAA	-22	NA	27055395	27041552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
ES.30350.32	chr7	-	2228	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	85.0807520829476	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTGTTTATAGTCTTG	NA	False	NA	-33	True	AATAAA	-12	NA	27055393	27041562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054825_27054872_27054997_27055052_27055295
ES.30350.34	chr7	-	7062	19	NNC	ENSMUSG00000011751.17	novel	8747	36	NA	NA	-8220	0	intron_retention	FALSE	canonical	0	0	junction_11	10.3171916936948	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27104198	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071538_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ES.30350.35	chr7	-	5447	21	ISM	ENSMUSG00000011751.17	ENSMUST00000011895.14	8747	36	41938	0	-8108	0	3prime_fragment	FALSE	canonical	1	1	junction_19	9.13290753265355	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27104086	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ES.30350.37	chr7	-	4776	19	FSM	ENSMUSG00000011751.17	ENSMUST00000108363.8	4724	19	-52	0	-52	0	multi-exon	FALSE	canonical	2	8	junction_18	8.28150549920323	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27096030	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27095913
ES.30350.38	chr7	-	4831	19	NIC	ENSMUSG00000011751.17	novel	8747	36	NA	NA	-6354	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	8.97871282259419	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27102332	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27102160
ES.30350.39	chr7	-	5284	20	NIC	ENSMUSG00000011751.17	novel	8747	36	NA	NA	-8238	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.68163581334067	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27104216	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27056876_27059167_27059211_27059359_27059534_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592
ES.30350.40	chr7	-	1463	1	NIC	ENSMUSG00000011751.17	novel	4861	18	NA	NA	36661	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27057270	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27055800_27057300
ES.30350.41	chr7	-	4801	19	NNC	ENSMUSG00000011751.17	novel	4740	19	NA	NA	620	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	10.8656213993983	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27095003	27055807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27082981_27083083_27093582_27093730_27094698
ES.30350.44	chr7	-	3018	11	NNC	ENSMUSG00000011751.17	novel	4861	18	NA	NA	26476	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.6658333007787	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGCTGGTTTGTTCGT	NA	False	NA	-3	True	AATAAA	-17	NA	27067455	27055810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27067371
ES.30350.47	chr7	-	4814	19	NNC	ENSMUSG00000011751.17	novel	4740	19	NA	NA	-95	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	11.3822473859759	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTCTTCGCTGGTTTG	NA	False	NA	-8	True	AATAAA	-12	NA	27095718	27055815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27091678_27091863_27093582_27093730_27095542
ES.30350.48	chr7	-	4835	19	NNC	ENSMUSG00000011751.17	novel	4740	19	NA	NA	657	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	9.09704198294732	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTCTTCGCTGGTTTG	NA	False	NA	-8	True	AATAAA	-12	NA	27094966	27055815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27094782
ES.30350.49	chr7	-	3774	14	NNC	ENSMUSG00000011751.17	novel	4740	19	NA	NA	643	-7116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.30581585597514	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGATTGATTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	27094980	27062927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27094782
ES.30350.50	chr7	-	993	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	25289	10498	25289	-10494	internal_fragment	FALSE	canonical	3	18	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTGACCAGACAAGGT	NA	False	NA	NA	False	AATGAA	-15	NA	27068642	27066305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27067270_27068613
ES.30350.51	chr7	-	2152	8	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	2832	10863	2832	-10859	internal_fragment	FALSE	canonical	2	10	junction_7	3.31354671564092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCAGCACTGAGAAGGT	NA	False	NA	NA	False	NA	NA	NA	27091099	27066670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857
ES.30350.52	chr7	-	159	1	Intergenic	novelGene_25047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTACCAGTGAAGGC	NA	False	NA	-5	True	AATAAA	-17	NA	27080589	27080430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27080400_27080600
ES.30350.53	chr7	-	3554	9	ISM	ENSMUSG00000011751.17	ENSMUST00000011895.14	8747	36	29799	34271	-20247	-34267	internal_fragment	TRUE	canonical	1	1	junction_3	4.67540105231626	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAACTGAGAATGTAGA	5712	False	NA	NA	False	NA	NA	NA	27116225	27090078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129
ES.30350.54	chr7	-	4529	14	ISM	ENSMUSG00000011751.17	ENSMUST00000011895.14	8747	36	13081	45642	12999	32176	internal_fragment	FALSE	canonical	2	4	junction_6	2.55356810349197	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACACATCATTATGCCCT	717	False	NA	NA	False	NA	NA	NA	27132943	27101449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27102364_27103592_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472
ES.30350.55	chr7	-	3799	16	NNC	ENSMUSG00000011751.17	novel	8747	36	NA	NA	-12	32167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.48074066192176	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGACACACATCA	NA	False	NA	NA	False	NA	NA	NA	27146036	27101458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27102364_27103592_27104344_27106535_27106674_27114060_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472_27132647_27133630_27133783_27141819_27142007_27145887
ES.30350.56	chr7	-	3813	13	NIC	ENSMUSG00000011751.17	novel	8747	36	NA	NA	13031	31608	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	3.23608130649127	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTATTTAATCTATGT	749	False	NA	NA	False	NA	NA	NA	27132911	27102017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27102364_27103592_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27126250_27126332_27127608_27127701_27132472
ES.30350.57	chr7	-	3759	13	ISM	ENSMUSG00000011751.17	ENSMUST00000011895.14	8747	36	13081	47641	12999	30177	internal_fragment	FALSE	canonical	2	4	junction_5	2.32139804619735	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTGAGGTCTGTGACA	717	False	NA	NA	False	ATTAAA	-19	NA	27132943	27103448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472
ES.30350.58	chr7	-	3056	14	NNC	ENSMUSG00000011751.17	novel	493	3	NA	NA	-226	22293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.52326453336257	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTCTTTTCTTTTTTT	NA	False	NA	NA	False	ACTAAA	-7	NA	27146250	27111332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27112192_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472_27132647_27133630_27133783_27141819_27142007_27145887
ES.30350.9	chr7	-	2606	16	NNC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_15	119.000728289088	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATAGTCTTGGTTTGT	NA	False	NA	-27	True	AATAAA	-18	NA	27055386	27041556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055046_27055295
ES.30351.1	chr7	+	884	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	-12	156	-12	4	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTCTGTCTGTGA	NA	False	NA	50	True	NA	NA	NA	27147390	27165413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ES.30351.2	chr7	+	809	5	NNC	ENSMUSG00000040466.17	novel	1028	5	NA	NA	-16	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.797895681129	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCCTAACCCTGATTT	NA	False	NA	32	True	AATAAA	-29	NA	27147440	27165395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27147612_27158677_27158846_27158987_27159078_27161991_27162121_27165144
ES.30351.3	chr7	+	1586	1	FSM	ENSMUSG00000040466.17	ENSMUST00000207799.2	1504	1	-42	-40	-13	40	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGAAGGGATTAGGGGA	NA	False	NA	NA	False	NA	NA	NA	27147443	27149029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27147400_27149000
ES.30351.4	chr7	+	930	4	FSM	ENSMUSG00000040466.17	ENSMUST00000108358.8	951	4	-7	28	-7	-14	multi-exon	FALSE	canonical	1	3	junction_2	187.642094306037	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCCTAACCCTGATTT	NA	False	NA	32	True	AATAAA	-29	NA	27147449	27165395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27147622_27158680_27159059_27161991_27162121_27165144
ES.30351.5	chr7	+	527	4	NNC	ENSMUSG00000040466.17	novel	509	3	NA	NA	0	20111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	164.894579117151	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTCGGTTTTTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	27147485	27185680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27147622_27158680_27158846_27158987_27159185_27185651
ES.30351.6	chr7	+	119	1	Intergenic	novelGene_25052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	27154412	27154531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27154400_27154500
ES.30351.7	chr7	+	1707	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	-374	-4	-374	4	multi-exon	FALSE	canonical	3	104	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAATTAAATCTGTAA	NA	False	NA	88	True	AATAAA	-20	NA	27172818	27176793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27173297_27175564
ES.30351.8	chr7	+	1379	2	NNC	ENSMUSG00000055200.8	novel	1329	2	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGGAATTGTAATTA	NA	False	NA	79	True	AATAAA	-11	NA	27173202	27176784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27173362_27175564
ES.30352.1	chr7	-	1696	1	FSM	ENSMUSG00000082016.4	ENSMUST00000117129.2	765	1	-27	-904	-27	904	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8930	False	NA	NA	False	AATAAA	-36	NA	27169987	27168291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27168300_27170000
ES.30353.1	chr7	-	337	1	Intergenic	novelGene_25053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	725	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAGAAAAAAAAAAA	6180	False	NA	NA	False	NA	NA	NA	27183299	27182962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27183000_27183300
ES.30353.2	chr7	-	229	1	Intergenic	novelGene_25054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	725	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	6178	False	NA	NA	False	NA	NA	NA	27183301	27183072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27183100_27183300
ES.30354.1	chr7	+	1407	2	FSM	ENSMUSG00000008384.9	ENSMUST00000135881.2	366	2	-236	-805	229	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTGTGTGTGCTTCTTT	6818	False	NA	8	True	ATTAAA	-18	NA	27186563	27189737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27186911_27188677
ES.30355.1	chr7	+	223	1	Intergenic	novelGene_25055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCCGTCTTGAAAAAC	526	False	NA	NA	False	AATAAA	-27	NA	27195679	27195902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27195700_27195900
ES.30356.1	chr7	+	4701	7	FSM	ENSMUSG00000053198.15	ENSMUST00000098644.9	4841	7	-33	173	-33	0	multi-exon	FALSE	canonical	2	4	junction_1	15.3124858276578	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	1728	False	NA	NA	False	AATAAA	-15	NA	27198715	27219466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27198791_27203957_27204002_27204089_27204189_27204304_27204432_27207371_27207529_27214675_27214873_27215464
ES.30356.10	chr7	+	225	1	Intergenic	novelGene_25057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTAGGGGCAAGGGC	NA	False	NA	NA	False	NA	NA	NA	27208949	27209174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27208900_27209200
ES.30356.11	chr7	+	4201	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	7443	0	7443	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27214673	27219466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27214873_27215464
ES.30356.12	chr7	+	3865	3	FSM	ENSMUSG00000040424.16	ENSMUST00000037134.7	2926	3	-929	-10	-929	5	multi-exon	FALSE	canonical	1	2	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGTTACCACTGG	NA	False	NA	NA	False	AATAAA	-19	NA	27225554	27230605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27228078_27228373_27229223_27230112
ES.30356.2	chr7	+	4675	7	NNC	ENSMUSG00000053198.15	novel	4841	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9312760178071	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	1764	False	NA	NA	False	AATAAA	-15	NA	27198751	27219466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27198791_27203947_27204002_27204089_27204189_27204304_27204432_27207371_27207529_27214675_27214873_27215464
ES.30356.3	chr7	+	178	1	Antisense	novelGene_ENSMUSG00000087371.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATACT	5911	False	NA	NA	False	NA	NA	NA	27202898	27203076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_27202900_27203100
ES.30356.4	chr7	+	205	2	Antisense	novelGene_ENSMUSG00000087371.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGAGTTCAGTTTCC	5912	False	NA	NA	False	NA	NA	NA	27202899	27213639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_27203073_27213607
ES.30356.5	chr7	+	4732	7	NNC	ENSMUSG00000053198.15	novel	4497	3	NA	NA	-3463	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9312760178071	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCATGTGTCTTG	6775	False	NA	NA	False	AATAAA	-8	NA	27203762	27219459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27203876_27203957_27204002_27204089_27204189_27204304_27204432_27207371_27207529_27214675_27214873_27215464
ES.30356.6	chr7	+	4511	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	-13	-1	-8	1	multi-exon	FALSE	canonical	3	33	junction_2	5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTCTTGGTTCTCGT	NA	False	NA	NA	False	AATAAA	-16	NA	27207217	27219467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27207529_27214675_27214873_27215464
ES.30356.7	chr7	+	5085	2	ISM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	1	3	1	-3	intron_retention	FALSE	canonical	3	43	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCATGTGTCTTGGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	27207231	27219463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27207529_27214675
ES.30356.8	chr7	+	1986	4	Fusion	ENSMUSG00000053198.15_ENSMUSG00000040424.16	novel	2926	3	NA	NA	11	5	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGTTACCACTGG	NA	False	NA	NA	False	AATAAA	-19	NA	27207241	27230605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_27207529_27227720_27228078_27228373_27229223_27230112
ES.30356.9	chr7	+	3029	2	NNC	ENSMUSG00000053198.15	novel	4298	2	NA	NA	24	-7776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCATAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	27207254	27211480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27208928_27210124
ES.30357.1	chr7	-	155	1	Intergenic	novelGene_25056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	27201873	27201718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27201700_27201900
ES.30358.1	chr7	-	2605	5	NNC	ENSMUSG00000087371.2	novel	2713	4	NA	NA	22	122	intron_retention	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27207525	27202020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27202888_27203095_27204506_27204696_27204878_27205419_27205540_27207498
ES.30358.2	chr7	-	3025	2	NNC	ENSMUSG00000087371.2	novel	2713	4	NA	NA	2198	26	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27205349	27202116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27202888_27203095
ES.30359.1	chr7	-	158	1	Intergenic	novelGene_25058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	27210855	27210697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27210700_27210900
ES.3036.1	chr10	+	141	1	Intergenic	novelGene_2371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69189108	69189249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69189100_69189200
ES.30360.1	chr7	-	173	1	Intergenic	novelGene_25059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	27213054	27212881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27212900_27213100
ES.30361.1	chr7	+	2737	10	NNC	ENSMUSG00000049643.16	novel	1871	9	NA	NA	-171	0	intron_retention	FALSE	canonical	2	7	junction_1	105.210312595977	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	225	False	NA	NA	False	AATAAA	-20	NA	27252486	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252644_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30361.10	chr7	+	2285	7	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_6	127.986218876183	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	450	False	NA	NA	False	AATAAA	-17	NA	27252711	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27279761
ES.30361.11	chr7	+	2781	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	9	1	intron_retention	FALSE	canonical	0	0	junction_7	135.65710449512	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTGTGTCTGTGT	458	False	NA	NA	False	AATAAA	-16	NA	27252719	27281520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27272512_27272659_27274015_27274166_27278137_27278209_27279761
ES.30361.12	chr7	+	2496	9	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	11	2	intron_retention	FALSE	canonical	0	0	junction_6	113.9247970154	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	460	False	NA	NA	False	AATAAA	-17	NA	27252721	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27274015_27274166_27278137_27278209_27279761
ES.30361.13	chr7	+	2563	9	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	11	2	intron_retention	FALSE	canonical	3	28	junction_8	102.755702396509	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	460	False	NA	NA	False	AATAAA	-17	NA	27252721	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27279761
ES.30361.14	chr7	+	4184	9	ISM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	11	6	11	-1	intron_retention	FALSE	canonical	3	300	junction_8	24.2535435555302	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATGTTTTGTGTCTGT	460	False	NA	NA	False	AATAAA	-14	NA	27252721	27281518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137
ES.30361.15	chr7	+	2292	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	11	-473	intron_retention	FALSE	canonical	2	11	junction_4	129.933983237643	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTTTCCTTCCTTCCT	460	False	NA	27	True	AATATA	-15	NA	27252721	27281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30361.16	chr7	+	2258	12	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	11	59271	intron_retention	FALSE	non_canonical	0	0	junction_10	129.866937623104	928	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACCAAAAAATGTAGTC	460	False	NA	NA	False	NA	NA	NA	27252721	27340795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27281047_27290484_27290522_27340733
ES.30361.17	chr7	+	2816	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	12	0	intron_retention	FALSE	canonical	2	11	junction_4	146.620462419132	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	461	False	NA	NA	False	AATAAA	-20	NA	27252722	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
ES.30361.19	chr7	+	6596	9	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	24	0	intron_retention	FALSE	canonical	3	308	junction_7	24.0932433474615	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	473	False	NA	NA	False	AATAAA	-20	NA	27252734	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27278209_27279761
ES.30361.2	chr7	+	2708	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	-7	0	-7	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	389	False	NA	NA	False	AATAAA	-20	NA	27252650	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30361.20	chr7	+	352	5	ISM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	24	17393	24	-8621	5prime_fragment	FALSE	canonical	3	314	junction_4	27.0127284812179	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGTGACCGTCGTG	473	False	NA	NA	False	AATAAA	-14	NA	27252734	27264131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084
ES.30361.21	chr7	+	2553	10	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	29	-108	intron_retention	FALSE	canonical	3	32	junction_7	97.9850076715569	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTGCCTTCTTTTGT	478	False	NA	NA	False	NA	NA	NA	27252739	27281411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
ES.30361.22	chr7	+	5725	10	NNC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_9	153.846323836563	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	478	False	NA	NA	False	AATAAA	-20	NA	27252739	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27275662_27278213
ES.30361.23	chr7	+	176	1	Intergenic	novelGene_25062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1182	False	NA	NA	False	NA	NA	NA	27267939	27268115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27267900_27268100
ES.30361.24	chr7	+	2126	4	FSM	ENSMUSG00000049643.16	ENSMUST00000186501.2	340	4	-110	-1676	-110	2	multi-exon	FALSE	canonical	3	27	junction_1	145.525102836437	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	7024	False	NA	NA	False	AATAAA	-17	NA	27273781	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27273927_27274015_27274166_27278137_27278209_27279761
ES.30361.25	chr7	+	2081	3	ISM	ENSMUSG00000049643.16	ENSMUST00000190656.2	775	5	8832	-1461	23	1	3prime_fragment	FALSE	canonical	3	300	junction_1	31	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTTTTGTGTCTGTGT	7157	False	NA	NA	False	AATAAA	-16	NA	27273914	27281520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27274166_27278137_27278209_27279761
ES.30361.26	chr7	+	5049	1	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	2582	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTGTCTGTGTAT	9716	False	NA	NA	False	AATAAA	-18	NA	27276473	27281522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27276500_27281500
ES.30361.27	chr7	+	1741	2	NNC	ENSMUSG00000049643.16	novel	1871	9	NA	NA	6954	7195	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	27280845	27288719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27282519_27288651
ES.30361.28	chr7	+	1771	14	NNC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	-6528	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.262989022527	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGTGTTCCCTTCCC	NA	False	NA	16	True	TTTAAA	-22	NA	27284448	27337651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27284604_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.29	chr7	+	2969	14	NNC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	-6499	0	intron_retention	FALSE	canonical	0	0	junction_1	143.262989022527	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27284477	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27284604_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.3	chr7	+	2671	10	NNC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	17	0	intron_retention	FALSE	canonical	2	8	junction_7	105.315868219207	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	413	False	NA	NA	False	AATAAA	-20	NA	27252674	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274028_27274166_27278137_27278209_27279761
ES.30361.30	chr7	+	174	1	Intergenic	novelGene_25064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	27288545	27288719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27288500_27288700
ES.30361.31	chr7	+	3219	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	-48	1373	-48	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27290928	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.32	chr7	+	2925	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-20	0	intron_retention	FALSE	canonical	1	2	junction_1	142.771137255175	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27290956	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291039_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.33	chr7	+	3313	15	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	205.306105459082	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCCAGTCCACATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	27290974	27338875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291039_27308047_27308179_27315171_27315581_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.34	chr7	+	1846	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	100	2598	-94	58	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTGTTCCCTTCCCTG	NA	False	NA	18	True	TTTAAA	-24	NA	27291076	27337653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.35	chr7	+	3210	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-52	-1	intron_retention	FALSE	canonical	2	5	junction_13	141.0567471522	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCCAGTCCACATT	NA	False	NA	NA	False	AATAAA	-15	NA	27291118	27338872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336807_27337486
ES.30361.36	chr7	+	3895	13	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	-51	-3	-51	0	intron_retention	FALSE	canonical	3	377	junction_6	56.056704921594	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291119	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516
ES.30361.37	chr7	+	3735	11	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-51	583	intron_retention	FALSE	canonical	3	377	junction_6	57.3689811657833	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCTTACCAGGGCTT	NA	False	NA	NA	False	AATAAA	-40	NA	27291119	27338178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27336436_27336516
ES.30361.38	chr7	+	3138	15	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-51	-3	intron_retention	FALSE	canonical	0	0	junction_2	177.914391245466	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27291119	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315462_27315581_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.39	chr7	+	2861	13	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-50	0	intron_retention	FALSE	canonical	0	0	junction_2	144.197853081568	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291120	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308142_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.4	chr7	+	2013	11	FSM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	-27	3	-8	2	multi-exon	FALSE	canonical	3	17	junction_10	97.3365296278843	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	422	False	NA	NA	False	AATAAA	-17	NA	27252683	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
ES.30361.41	chr7	+	2985	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-47	1	intron_retention	FALSE	canonical	1	6	junction_2	138.165666789148	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGTCCACATTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27291123	27338876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308142_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.42	chr7	+	5273	13	ISM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	148	-10	-46	10	intron_retention	FALSE	canonical	3	377	junction_6	56.056704921594	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTGTTTATGGCCT	NA	False	NA	16	True	AATAAA	-27	NA	27291124	27340261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516
ES.30361.43	chr7	+	2917	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-45	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	143.355147186462	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGGCCCAGTCCACAT	NA	False	NA	NA	False	AATAAA	-14	NA	27291125	27338871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315694_27317629_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.44	chr7	+	2786	14	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-44	0	intron_retention	FALSE	non_canonical	0	0	junction_3	187.821456197858	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCCAGTCCACATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	27291126	27338875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315694_27317629_27317745_27328261_27328321_27328759_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.45	chr7	+	3177	15	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-43	-1	intron_retention	FALSE	canonical	0	0	junction_4	181.263887574926	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTCCACATTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	27291127	27338877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317753_27326850_27327001_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.46	chr7	+	4405	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	151	-12	-43	12	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTTATGGCCTGC	NA	False	NA	18	True	AATAAA	-29	NA	27291127	27340263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.47	chr7	+	3069	15	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-38	0	intron_retention	FALSE	canonical	1	1	junction_13	179.56672627097	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291132	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27336752_27336807_27337486
ES.30361.48	chr7	+	3283	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-37	-1	intron_retention	FALSE	canonical	0	0	junction_1	182.532545529598	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCCAGTCCACATT	NA	False	NA	NA	False	AATAAA	-15	NA	27291133	27338872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27315174_27315581_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.5	chr7	+	2194	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	29	478	-5	-473	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTTTCCTTCCTTCCT	425	False	NA	27	True	AATATA	-15	NA	27252686	27281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30361.50	chr7	+	3449	13	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	377	junction_6	53.6316526564926	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27291134	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27336436_27336516_27336620_27337486
ES.30361.51	chr7	+	5788	11	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-36	-5	intron_retention	FALSE	canonical	3	377	junction_6	57.3689811657833	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTGTGCTTGTACTT	NA	False	NA	1	True	AATAAA	-12	NA	27291134	27340246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27336436_27336516
ES.30361.52	chr7	+	2945	13	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-36	1	intron_retention	FALSE	canonical	0	0	junction_6	147.81207569824	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGTCCACATTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27291134	27338876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.53	chr7	+	5349	12	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-35	1	intron_retention	FALSE	canonical	3	377	junction_6	58.4844402560725	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTTGTACTTTGGTGT	NA	False	NA	7	True	AATAAA	-18	NA	27291135	27340252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335904_27336347_27336436_27336516
ES.30361.54	chr7	+	3973	12	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	377	junction_6	58.4844402560725	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTCCACATTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	27291136	27338877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335904_27336347_27336436_27336516
ES.30361.55	chr7	+	4398	15	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-23	-5	intron_retention	FALSE	canonical	1	1	junction_13	202.929162265947	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTGTGCTTGTACTT	NA	False	NA	1	True	AATAAA	-12	NA	27291147	27340246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336540_27336620_27336752_27336807_27337486
ES.30361.56	chr7	+	2309	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	172	2063	-22	593	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGGCTTCCTTCTAGCC	NA	False	NA	NA	False	NA	NA	NA	27291148	27338188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.57	chr7	+	3094	13	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-21	0	intron_retention	FALSE	canonical	3	377	junction_6	57.5796549717577	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291149	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.58	chr7	+	3103	15	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	-19	-5	intron_retention	FALSE	canonical	0	0	junction_4	181.096602927379	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCAGGGCCCAGTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	27291151	27338868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27320232_27320350_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.59	chr7	+	2921	14	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-19	-5	intron_retention	FALSE	canonical	0	0	junction_3	143.355147186462	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCAGGGCCCAGTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	27291151	27338868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308179_27315665_27315730_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.6	chr7	+	1535	11	FSM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	-24	478	-5	-473	multi-exon	FALSE	canonical	3	17	junction_10	97.3365296278843	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTTTCCTTCCTTCCT	425	False	NA	27	True	AATATA	-15	NA	27252686	27281046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
ES.30361.61	chr7	+	2850	13	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_1	144.080128169478	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27291158	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.62	chr7	+	3636	12	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_10	153.795829022745	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCCCAGTCCACATTT	NA	False	NA	NA	False	AATAAA	-16	NA	27291158	27338873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27336347_27336436_27336516
ES.30361.64	chr7	+	2846	13	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_2	144.197853081568	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27291161	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308176_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.65	chr7	+	4453	13	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	-5	2	intron_retention	FALSE	canonical	3	377	junction_6	57.5796549717577	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTACTTTGGTGTT	NA	False	NA	8	True	AATAAA	-19	NA	27291165	27340253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.66	chr7	+	2929	14	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	3	-1	intron_retention	FALSE	canonical	1	5	junction_5	142.7593249216	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCCAGTCCACATT	NA	False	NA	NA	False	AATAAA	-15	NA	27291173	27338872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328759_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.69	chr7	+	1507	13	NNC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	82	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	144.197853081568	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTGTTCCCTTCCCTG	NA	False	NA	18	True	TTTAAA	-24	NA	27291252	27337653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291305_27308047_27308142_27317629_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.7	chr7	+	2713	10	NIC	ENSMUSG00000049643.16	novel	2701	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	32	junction_7	97.9850076715569	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTGTGTCTGTGTA	428	False	NA	NA	False	AATAAA	-17	NA	27252689	27281521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
ES.30361.70	chr7	+	4554	11	NIC	ENSMUSG00000004056.16	novel	4544	14	NA	NA	101	0	intron_retention	FALSE	canonical	3	377	junction_6	60.7082366734531	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291271	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27332693_27333986_27334110_27335463_27335904_27336347_27336436_27336516
ES.30361.71	chr7	+	3384	2	ISM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	112	27466	112	-4362	5prime_fragment	FALSE	canonical	3	517	junction_1	0	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTGAGTGTCACTTAA	NA	False	NA	NA	False	NA	NA	NA	27291282	27311409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27291305_27308047
ES.30361.72	chr7	+	3683	14	NIC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	242	1	intron_retention	FALSE	canonical	1	4	junction_1	142.279581423129	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCAGTCCACATTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	27291412	27338876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27292255_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.73	chr7	+	3016	14	NNC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	309	-3	intron_retention	FALSE	canonical	1	7	junction_1	141.542809297772	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27291479	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291661_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.74	chr7	+	3116	15	NNC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	-246	-1	intron_retention	FALSE	canonical	1	1	junction_1	178.785428913647	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCCCAGTCCACATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	27291546	27338874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291661_27306667_27306831_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.75	chr7	+	3173	16	NNC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	-239	0	intron_retention	FALSE	canonical	0	0	junction_1	204.91587433763	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291553	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27291661_27292182_27292255_27292858_27293010_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.76	chr7	+	3043	15	NIC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	327	-3	intron_retention	FALSE	canonical	0	0	junction_1	178.955586782912	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27292209	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27292255_27306667_27306831_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.77	chr7	+	5509	1	Genic_Genomic	ENSMUSG00000004056.16	novel	NA	NA	NA	NA	432	-16860	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27293402	27298911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_27293400_27298900
ES.30361.78	chr7	+	4055	15	FSM	ENSMUSG00000004056.16	ENSMUST00000108343.8	3122	15	-938	5	-918	-5	multi-exon	FALSE	canonical	0	0	junction_1	178.955586782912	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCAGGGCCCAGTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	27304303	27338868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27305363_27306667_27306831_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.79	chr7	+	3000	14	ISM	ENSMUSG00000004056.16	ENSMUST00000108343.8	3122	15	1424	3	-507	-3	3prime_fragment	FALSE	canonical	2	16	junction_1	139.336636333924	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	27306665	27338870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27306831_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.8	chr7	+	2801	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	-1	0	intron_retention	FALSE	canonical	2	11	junction_4	129.933983237643	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	429	False	NA	NA	False	AATAAA	-20	NA	27252690	27281524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30361.80	chr7	+	175	1	Intergenic	novelGene_25065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAACAGTGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	27321453	27321628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27321500_27321600
ES.30361.81	chr7	+	3711	10	ISM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	21734	5	-933	0	3prime_fragment	FALSE	canonical	3	377	junction_2	55.8777324849024	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCCCAGTCCACATTT	NA	False	NA	NA	False	AATAAA	-16	NA	27327016	27338873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.82	chr7	+	2184	8	ISM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	26558	3	-3637	0	3prime_fragment	FALSE	canonical	3	428	junction_5	47.4939308689832	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCCAGTCCACATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	27331840	27338875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ES.30361.83	chr7	+	2718	6	NIC	ENSMUSG00000004056.16	novel	2923	14	NA	NA	-3628	0	intron_retention	FALSE	canonical	3	456	junction_3	45.7060171093479	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27331849	27338878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27331909_27332623_27332693_27333986_27334110_27335463_27336436_27336516_27336620_27337486
ES.30361.84	chr7	+	3292	4	NIC	ENSMUSG00000004056.16	novel	3122	15	NA	NA	-1427	0	intron_retention	FALSE	canonical	3	456	junction_1	49.8062914365913	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCCCAGTCCACATTT	NA	False	NA	NA	False	AATAAA	-16	NA	27334050	27338873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27334110_27335463_27335593_27335688_27336436_27336516
ES.30361.9	chr7	+	2549	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	39	113	2	-108	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTGCCTTCTTTTGT	435	False	NA	NA	False	NA	NA	NA	27252696	27281411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ES.30362.1	chr7	-	2255	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	26	1	-2	-1	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATGAGATGGTATGT	NA	False	NA	0	True	AGTAAA	-30	NA	27252611	27231425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ES.30362.10	chr7	-	1856	11	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	564	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.129473947976	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGCTTAACTGAGTG	NA	False	NA	-16	True	AGTAAA	-14	NA	27241606	27231441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233279_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513
ES.30362.11	chr7	-	1974	11	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-76	-18	intron_retention	FALSE	canonical	2	2	junction_10	144.145204568171	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGTGCTTAACTGAGT	NA	False	NA	-17	True	AGTAAA	-13	NA	27242246	27231442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242174
ES.30362.12	chr7	-	2036	14	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-13	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	138.082686830634	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGTGCTTAACTGAG	NA	False	NA	-18	True	AGTAAA	-12	NA	27252454	27231443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241563_27242168_27242330_27244612_27244688_27252422
ES.30362.13	chr7	-	2100	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	178	19	-24	-19	multi-exon	FALSE	canonical	0	0	junction_12	174.958693349883	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGTGCTTAACTGAG	NA	False	NA	-18	True	AGTAAA	-12	NA	27252465	27231443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27248434_27248519_27252422
ES.30362.14	chr7	-	3728	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-10	-19	intron_retention	FALSE	canonical	3	277	junction_12	68.8022024033792	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGTGCTTAACTGAG	NA	False	NA	-18	True	AGTAAA	-12	NA	27252451	27231443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ES.30362.15	chr7	-	1947	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-23	-19	combination_of_known_junctions	FALSE	canonical	1	4	junction_8	141.628107497535	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGTGCTTAACTGAG	NA	False	NA	-18	True	AGTAAA	-12	NA	27252464	27231443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ES.30362.16	chr7	-	241	1	Intergenic	novelGene_25060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27233900	27233659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27233700_27233900
ES.30362.17	chr7	-	272	2	Intergenic	novelGene_25061	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27248993	27248619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27248859_27248960
ES.30362.2	chr7	-	2295	16	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	191.189771925406	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	False	NA	-5	True	AGTAAA	-25	NA	27252466	27231430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27248264_27248367_27248430_27248519_27252422
ES.30362.3	chr7	-	2255	14	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	16	-6	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	126.954541554455	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	False	NA	-5	True	AGTAAA	-25	NA	27252593	27231430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244711_27252422
ES.30362.4	chr7	-	2145	15	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	171.387271810877	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	False	NA	-5	True	AGTAAA	-25	NA	27252464	27231430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238533_27238576_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ES.30362.5	chr7	-	2103	12	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-21	-6	intron_retention	FALSE	canonical	3	22	junction_11	134.632834033901	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	False	NA	-5	True	AGTAAA	-25	NA	27252462	27231430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
ES.30362.6	chr7	-	1868	12	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-37	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	141.209064864831	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTGAGTGGTATGAGA	NA	False	NA	-8	True	AGTAAA	-22	NA	27242207	27231433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240502_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168
ES.30362.7	chr7	-	2147	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-12	-11	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAACTGAGTGGTATGA	NA	False	NA	-10	True	AGTAAA	-20	NA	27252588	27231435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
ES.30362.8	chr7	-	2014	4	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	2468	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	253.47496041139	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGCTTAACTGAGTG	NA	False	NA	-16	True	AGTAAA	-14	NA	27234897	27231441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233516_27233897
ES.30362.9	chr7	-	2140	14	NNC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	-4549	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.741947869319	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGCTTAACTGAGTG	NA	False	NA	-16	True	AGTAAA	-14	NA	27246719	27231441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27246629
ES.30363.1	chr7	-	211	1	Intergenic	novelGene_25063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTTGTTTTTTG	NA	False	NA	-1	True	NA	NA	NA	27286339	27286128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27286100_27286300
ES.30364.1	chr7	-	177	1	Intergenic	novelGene_25066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9505	False	NA	NA	False	NA	NA	NA	27330195	27330018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27330000_27330200
ES.30365.1	chr7	+	809	3	FSM	ENSMUSG00000007944.9	ENSMUST00000008088.9	2052	3	105	1138	105	-1138	multi-exon	FALSE	canonical	3	10	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTTGTGTGGTCTTA	NA	False	NA	11	True	NA	NA	NA	27353444	27355633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27353773_27354336_27354520_27355335
ES.30366.1	chr7	-	4175	1	Antisense	novelGene_ENSMUSG00000007944.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACCCCAACCTCACC	5760	False	NA	NA	False	AAAACA	-3	NA	27355591	27351416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27351400_27355600
ES.30366.2	chr7	-	3331	2	Antisense	novelGene_ENSMUSG00000007944.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5760	False	NA	NA	False	NA	NA	NA	27355591	27351444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27354517_27355332
ES.30367.1	chr7	-	3676	10	FSM	ENSMUSG00000040390.14	ENSMUST00000036453.14	3682	10	1	5	1	-5	multi-exon	FALSE	canonical	0	0	junction_3	25.4209012865835	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCTTGGCTGTGTGTG	NA	False	NA	-5	True	ATTAAA	-18	NA	27374018	27355804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27356412_27357276_27357958_27358254_27358368_27358445_27358600_27360959_27361077_27362649_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
ES.30367.10	chr7	-	3847	2	NNC	ENSMUSG00000040390.14	novel	1621	2	NA	NA	-6	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGCACTAAAGGGCTTC	NA	False	NA	-29	True	AATAAA	-20	NA	27374012	27367601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27369251_27371814
ES.30367.3	chr7	-	2649	5	ISM	ENSMUSG00000040390.14	ENSMUST00000108341.2	3403	11	38	5883	21	1611	5prime_fragment	FALSE	canonical	2	3	junction_1	32.2829289253624	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAAAGATATGTTATGT	NA	False	NA	NA	False	NA	NA	NA	27373985	27361971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
ES.30367.4	chr7	-	1811	3	NIC	ENSMUSG00000040390.14	novel	3682	10	NA	NA	10	7	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	40.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAACAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	27373996	27363597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27363999_27367773_27367955_27372767
ES.30367.5	chr7	-	1977	4	ISM	ENSMUSG00000040390.14	ENSMUST00000108341.2	3403	11	10	7509	6	7	5prime_fragment	FALSE	canonical	3	11	junction_2	33.0891052899423	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAACAGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	27374013	27363597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27363999_27364374_27364524_27367773_27367955_27372767
ES.30367.6	chr7	-	4303	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	12	-2694	12	-1274	multi-exon	FALSE	canonical	3	84	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGATGAGTTCATTGCA	NA	False	NA	NA	False	AATAAA	-19	NA	27373994	27364878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27367955_27372767
ES.30367.7	chr7	-	3541	1	NIC	ENSMUSG00000040390.14	novel	3682	10	NA	NA	-3899	-1286	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGACAAAGAAGTGAT	NA	False	NA	NA	False	AATAAA	-7	NA	27368431	27364890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27364900_27368400
ES.30367.8	chr7	-	2887	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-25	-1241	-8	1241	multi-exon	FALSE	canonical	3	84	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTTGTGCATGAAAATAA	NA	False	NA	NA	False	AAAAAG	-36	NA	27374031	27366331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27367955_27372767
ES.30367.9	chr7	-	1647	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	-25	-1	-8	1	multi-exon	FALSE	canonical	3	84	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGCGTAGTCATTGAA	NA	False	NA	1	True	ACTAAA	-18	NA	27374031	27367571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27367955_27372767
ES.30368.1	chr7	+	4594	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	-14681	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0180874486714	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27374083	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27374213_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.10	chr7	+	2198	5	NIC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	144	-1581	intron_retention	FALSE	canonical	3	19	junction_1	18.3762754659371	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCTACTTTTAGTGA	NA	False	NA	9	True	AGTAAA	-13	NA	27388908	27401911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.11	chr7	+	4647	6	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	146	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.7711338159476	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388910	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388931_27390473_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.12	chr7	+	3991	5	NIC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	146	214	intron_retention	FALSE	canonical	3	19	junction_1	18.3762754659371	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGAAACCACCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	27388910	27403706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.13	chr7	+	2089	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	149	-1581	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2918702932973	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCTACTTTTAGTGA	NA	False	NA	9	True	AGTAAA	-13	NA	27388913	27401911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390370_27390473_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.14	chr7	+	3238	3	NNC	ENSMUSG00000057093.15	novel	527	3	NA	NA	175	207	intron_retention	FALSE	non_canonical	0	0	junction_2	14	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAAGTTGGGTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	27388939	27393324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391960_27392906_27393111_27393310
ES.30368.15	chr7	+	6069	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.7711338159476	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388943	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390548_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.16	chr7	+	5200	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	198	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0180874486714	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388962	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388990_27389927_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.17	chr7	+	881	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	203	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0180874486714	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATGTGAAGTATGTG	NA	False	NA	NA	False	NA	NA	NA	27388967	27402309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388984_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.18	chr7	+	2280	5	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	211	-1426	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.2056027717446	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGTGTGGGACGTGCT	NA	False	NA	NA	False	NA	NA	NA	27388975	27402066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390721_27391906_27391954_27392906_27393034_27398077_27398177_27401804
ES.30368.19	chr7	+	4712	7	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	211	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0449254902195	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTGTCTGAGTGAT	NA	False	NA	2	True	NA	NA	NA	27388975	27405904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388990_27390126_27390365_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.2	chr7	+	1303	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	-14368	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.87420882906575	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	27374396	27398974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27374542_27390639_27390721_27391906_27391960_27392906_27393034_27398077
ES.30368.20	chr7	+	6092	8	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	21.9144905931939	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388976	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390365_27390639_27390721_27391906_27391960_27392906_27393034_27394009_27394332_27398076_27398177_27401804_27402969_27403052
ES.30368.21	chr7	+	1555	7	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	219	-1425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.5284050087837	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTGTGGGACGTGCTT	NA	False	NA	NA	False	NA	NA	NA	27388983	27402067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27389139_27389590_27389656_27389927_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.22	chr7	+	5840	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	221	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2918702932973	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388985	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390365_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.23	chr7	+	4716	8	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	223	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1051787821987	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388987	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27389149_27389590_27389660_27390473_27390495_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.24	chr7	+	6007	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	225	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	20.2918702932973	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388989	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390370_27390473_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.25	chr7	+	5884	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0180874486714	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388997	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390417_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.26	chr7	+	5109	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	247	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.0180874486714	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27389011	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27389660_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.27	chr7	+	4139	7	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	965	1150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.524129275375	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATGACTGCAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	27389729	27404642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27390495_27390631_27390721_27391906_27391960_27392906_27393034_27398077_27398192_27399430_27399584_27401804
ES.30368.28	chr7	+	4505	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1516738055805	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27391464	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391586_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.29	chr7	+	4512	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	199	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.5554871372799	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27391536	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.3	chr7	+	10514	6	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	-4353	0	intron_retention	TRUE	canonical	0	0	junction_1	21.0180874486714	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27384411	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27384469_27384647_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.30	chr7	+	3208	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	234	1148	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	22.5554871372799	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACATGACTGCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	27391571	27404640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.31	chr7	+	4512	5	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1516738055805	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27391585	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391714_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.32	chr7	+	4759	6	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	273	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.8193472919817	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTGAGTGATCTT	NA	False	NA	5	True	NA	NA	NA	27391610	27405907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391665_27391906_27391960_27392906_27393034_27394009_27394332_27398076_27398177_27401804
ES.30368.33	chr7	+	2737	4	NNC	ENSMUSG00000057093.15	novel	1947	4	NA	NA	-69	-2485	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.1993265821489	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTAGGCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	27391832	27395934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27391960_27392906_27393111_27393310_27395355_27395572
ES.30368.34	chr7	+	4443	4	FSM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	-79	-2417	-54	0	multi-exon	FALSE	canonical	3	20	junction_2	19.1369334592098	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27391847	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.35	chr7	+	3170	4	FSM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	-70	-1153	-45	1153	multi-exon	FALSE	canonical	3	20	junction_2	19.1369334592098	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGACTGCAAAGGAATGTG	NA	False	NA	NA	False	NA	NA	NA	27391856	27404645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.36	chr7	+	4409	4	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	209	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	24.7116706571342	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27392135	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27392214_27392906_27393034_27398077_27398177_27401804
ES.30368.37	chr7	+	4534	4	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	209	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	25.703436864876	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27392135	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27392339_27392906_27393034_27398077_27398177_27401804
ES.30368.39	chr7	+	4393	4	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	525	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7332502076846	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGTGTCTGAGTGAT	NA	False	NA	2	True	NA	NA	NA	27392451	27405904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27392519_27392906_27393034_27398077_27398177_27401804
ES.30368.4	chr7	+	4519	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	93	0	93	0	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388857	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.40	chr7	+	4348	4	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	846	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7332502076846	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAACTGTGTCTGAGTG	NA	False	NA	0	True	NA	NA	NA	27392772	27405902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27392797_27392906_27393034_27398077_27398177_27401804
ES.30368.41	chr7	+	4434	3	ISM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	877	-2417	877	0	3prime_fragment	FALSE	canonical	3	20	junction_1	22	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27392803	27405909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27393034_27398077_27398177_27401804
ES.30368.42	chr7	+	420	2	Fusion	ENSMUSG00000057093.15_ENSMUSG00000037640.16	novel	4612	6	NA	NA	13616	1226	multi-exon	TRUE	non_canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCTGGCTCCATTT	NA	False	NA	35	True	NA	NA	NA	27405542	27451112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_27405550_27450699
ES.30368.43	chr7	+	3800	6	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	-1	1226	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	64.2588515303534	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCTGGCTCCATTT	NA	False	NA	35	True	NA	NA	NA	27430812	27451112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.44	chr7	+	3938	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	2	1956	2	1285	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGAAGCCAGGTGTAA	NA	False	NA	94	True	NA	NA	NA	27430815	27451171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.45	chr7	+	5767	5	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.9300303824561	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTTTGTCAAGTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	27430815	27453135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.46	chr7	+	3667	5	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	2	1195	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	55.4323912527684	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTGGAATAAAGACTTT	NA	False	NA	4	True	NA	NA	NA	27430815	27451081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27447592_27449591_27449672
ES.30368.47	chr7	+	4469	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	4	1423	4	-1423	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTAGAATCTTG	NA	False	NA	NA	False	NA	NA	NA	27430817	27451704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.48	chr7	+	3369	7	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	9	1224	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	71.1407056473296	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27430822	27451110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27448874_27449292_27449596_27449677
ES.30368.49	chr7	+	5805	6	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	-2	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.2588515303534	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTCAAGTTATCCC	NA	False	NA	NA	False	AATAAA	-24	NA	27430833	27453138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.5	chr7	+	3243	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	103	1266	103	1151	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGACTGCAAAGGAATG	NA	False	NA	NA	False	NA	NA	NA	27388867	27404643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.50	chr7	+	2803	6	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	-2	250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.2588515303534	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCATCTTTAATACTACT	NA	False	NA	NA	False	NA	NA	NA	27430833	27450136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.51	chr7	+	3856	7	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	8	1224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.8136216821399	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27430843	27451110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27437953_27438043_27440381_27440481_27447592_27449596_27449677
ES.30368.52	chr7	+	593	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	34	5269	-9	-113	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGTGGGAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	27430847	27447858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.53	chr7	+	4357	6	NNC	ENSMUSG00000037640.16	novel	811	6	NA	NA	-9	-1423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.2588515303534	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTAGAATCTTG	NA	False	NA	NA	False	NA	NA	NA	27430847	27451704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.54	chr7	+	3552	1	NIC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	2	-3586	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAACTTTCTCAAAAG	NA	False	NA	NA	False	TTTAAA	-6	NA	27430858	27434410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27430900_27434400
ES.30368.55	chr7	+	7784	4	FSM	ENSMUSG00000037640.16	ENSMUST00000126884.2	1803	4	130	-6111	30	-110	multi-exon	FALSE	canonical	3	15	junction_1	68.9557023667288	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGGAAGTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	27430965	27447861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381
ES.30368.56	chr7	+	5821	6	NNC	ENSMUSG00000037640.16	novel	2727	5	NA	NA	62	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.084816258124	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTGCTGAGTATTT	NA	False	NA	NA	False	AATAAA	-10	NA	27430997	27453124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.57	chr7	+	3801	6	NNC	ENSMUSG00000037640.16	novel	2727	5	NA	NA	67	1224	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	74.084816258124	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27431002	27451110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449678
ES.30368.58	chr7	+	4478	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	67	-1818	67	-1423	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGTTTTAGAATCTTG	NA	False	NA	NA	False	NA	NA	NA	27431002	27451704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.59	chr7	+	3880	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	71	-1224	71	1224	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27431006	27451110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.6	chr7	+	4881	4	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	110	-2518	intron_retention	TRUE	non_canonical	0	0	junction_2	6.12825877028341	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27388874	27395901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388912_27390639_27393111_27393310_27395355_27395572
ES.30368.60	chr7	+	3724	5	NNC	ENSMUSG00000037640.16	novel	2727	5	NA	NA	94	1226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.9300303824561	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTCTGGCTCCATTT	NA	False	NA	35	True	NA	NA	NA	27431029	27451112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27431090_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.61	chr7	+	4454	5	NNC	ENSMUSG00000037640.16	novel	2115	4	NA	NA	253	-1433	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	68.443407279299	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATGTTT	NA	False	NA	NA	False	NA	NA	NA	27436044	27451694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27436118_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ES.30368.62	chr7	+	3736	5	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	-11	1225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	69.2838364988545	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTGTCTGGCTCCATT	NA	False	NA	34	True	NA	NA	NA	27436340	27451111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27436414_27437727_27437855_27440381_27440481_27447592_27449596_27449677
ES.30368.63	chr7	+	3790	4	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	239	1224	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.6562492732896	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTGTCTGGCTCCAT	NA	False	NA	33	True	NA	NA	NA	27436619	27451110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27436666_27437727_27437855_27440381_27440481_27447592
ES.30368.64	chr7	+	4188	2	Genic_Genomic	ENSMUSG00000037640.16	novel	5896	5	NA	NA	5677	-113	multi-exon	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGTGGGAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	27442057	27447858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_27442869_27444481
ES.30368.65	chr7	+	5067	1	Genic_Genomic	ENSMUSG00000037640.16	novel	NA	NA	NA	NA	11689	9	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTTTGTCAAGTTATC	9	False	NA	NA	False	AATAAA	-22	NA	27448069	27453136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_27448100_27453100
ES.30368.66	chr7	+	6249	2	NNC	ENSMUSG00000037640.16	novel	5896	5	NA	NA	13685	6795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGCATGTCTTAGTTC	2005	False	NA	NA	False	NA	NA	NA	27450065	27459922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27450691_27454298
ES.30368.7	chr7	+	488	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	126	3998	126	-1581	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCTACTTTTAGTGA	NA	False	NA	9	True	AGTAAA	-13	NA	27388890	27401911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.8	chr7	+	506	6	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	142	-1581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0180874486714	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCTACTTTTAGTGA	NA	False	NA	9	True	AGTAAA	-13	NA	27388906	27401911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388941_27390634_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30368.9	chr7	+	4500	6	NNC	ENSMUSG00000057093.15	novel	4612	6	NA	NA	142	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.0180874486714	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	False	NA	3	True	NA	NA	NA	27388906	27405905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27388941_27390634_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ES.30369.1	chr7	-	176	1	Intergenic	novelGene_25067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27379837	27379661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27379700_27379800
ES.3037.1	chr10	+	179	1	Intergenic	novelGene_2372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCAAAAAACA	400	False	NA	NA	False	NA	NA	NA	69192495	69192674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69192500_69192700
ES.30370.1	chr7	-	178	1	Intergenic	novelGene_25068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAACTTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27380851	27380673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27380700_27380900
ES.30371.1	chr7	-	1040	2	Intergenic	novelGene_25069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCTTACCATTTGT	7881	False	NA	NA	False	NA	NA	NA	27388711	27387568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27388097_27388199
ES.30372.1	chr7	-	3452	1	Antisense	novelGene_ENSMUSG00000057093.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGGAGCACCTCCCCC	NA	False	NA	NA	False	NA	NA	NA	27403350	27399898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27399900_27403400
ES.30373.1	chr7	-	3908	1	Antisense	novelGene_ENSMUSG00000037640.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGGAAATCTGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	27449142	27445234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27445200_27449100
ES.30373.2	chr7	-	2246	1	Antisense	novelGene_ENSMUSG00000037640.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27449142	27446896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27446900_27449100
ES.30374.1	chr7	+	3348	3	FSM	ENSMUSG00000109143.2	ENSMUST00000208208.2	632	3	5	-2721	5	2721	multi-exon	FALSE	canonical	2	10	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTAGCAGCGTCATTCT	2440	False	NA	NA	False	NA	NA	NA	27465102	27473118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27465209_27468664_27468718_27469929
ES.30374.2	chr7	+	3359	2	ISM	ENSMUSG00000109143.2	ENSMUST00000208208.2	632	3	3449	-2720	-1383	2720	3prime_fragment	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTAGCAGCGTCATTC	2823	False	NA	NA	False	NA	NA	NA	27468546	27473117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27468718_27469929
ES.30374.3	chr7	+	4411	1	FSM	ENSMUSG00000109143.2	ENSMUST00000208942.2	126	1	-1223	-3062	-1223	2720	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTAGCAGCGTCATTC	2983	False	NA	NA	False	NA	NA	NA	27468706	27473117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27468700_27473100
ES.30375.1	chr7	+	1421	1	Intergenic	novelGene_25070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCAATCAGGCTGTG	1402	False	NA	NA	False	NA	NA	NA	27475202	27476623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27475200_27476600
ES.30376.1	chr7	+	573	6	NNC	ENSMUSG00000030604.10	novel	5329	4	NA	NA	-2337	-708	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.8871016865884	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCTCCAGGTTTAGTGA	4960	False	NA	NA	False	AGTAAA	-13	NA	27504283	27517386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27504337_27505499_27505634_27506608_27506662_27507625_27507753_27510175_27510275_27517279
ES.30376.2	chr7	+	3428	5	NNC	ENSMUSG00000030604.10	novel	5329	4	NA	NA	-2305	-829	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	15.352117117844	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCTTTCAGATTTGG	4992	False	NA	NA	False	AATAAA	-15	NA	27504315	27517265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27504337_27506608_27506662_27507625_27507753_27510175_27510275_27514137
ES.30377.1	chr7	-	8322	2	Antisense	novelGene_ENSMUSG00000030604.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAACTCGCTGTTGAAT	NA	False	NA	NA	False	NA	NA	NA	27514139	27504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27506662_27507625
ES.30377.2	chr7	-	5901	3	Antisense	novelGene_ENSMUSG00000030604.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAACTCGCTGTTGAAT	NA	False	NA	NA	False	NA	NA	NA	27514141	27504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27506662_27507625_27507752_27510174
ES.30377.3	chr7	-	9290	1	Antisense	novelGene_ENSMUSG00000030604.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAACTCGCTGTTGAAT	NA	False	NA	NA	False	NA	NA	NA	27514143	27504853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27504900_27514100
ES.30377.4	chr7	-	5873	3	Antisense	novelGene_ENSMUSG00000030604.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27514144	27504888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27506662_27507625_27507759_27510177
ES.30377.5	chr7	-	268	1	Intergenic	novelGene_25071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAACCAGCTGCTCCA	NA	False	NA	NA	False	NA	NA	NA	27509871	27509603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27509600_27509900
ES.30378.1	chr7	+	2322	2	NNC	ENSMUSG00000030604.10	novel	5329	4	NA	NA	9583	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAAGTGGTCTTCTCTT	NA	False	NA	14	True	NA	NA	NA	27519820	27522346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27521267_27521470
ES.30379.1	chr7	-	231	1	Antisense	novelGene_ENSMUSG00000030604.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACTAACAGGAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	27521468	27521237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_27521200_27521500
ES.3038.1	chr10	+	183	1	Antisense	novelGene_ENSMUSG00000112509.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAGAGATTTGAATT	309	False	NA	NA	False	NA	NA	NA	69208860	69209043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_69208900_69209000
ES.30380.1	chr7	+	243	1	Intergenic	novelGene_25072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAAACTTGCAA	5230	False	NA	NA	False	NA	NA	NA	27528510	27528753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27528500_27528800
ES.30381.1	chr7	-	164	1	Intergenic	novelGene_25073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCAGTCATCTTTA	8257	False	NA	NA	False	NA	NA	NA	27534534	27534370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27534400_27534500
ES.30382.1	chr7	+	3992	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	-203	-352	-203	352	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGGTCAATTTTG	205	False	NA	15	True	NA	NA	NA	27537828	27556215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.10	chr7	+	4016	5	NNC	ENSMUSG00000078779.5	novel	1962	4	NA	NA	1896	336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9611384444561	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	2304	False	NA	-1	True	NA	NA	NA	27539927	27556199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27540274_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.11	chr7	+	3767	5	NNC	ENSMUSG00000078779.5	novel	1962	4	NA	NA	1970	348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9611384444561	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGCTTGGTCAAT	2378	False	NA	11	True	NA	NA	NA	27540001	27556211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27540087_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.12	chr7	+	4122	5	NNC	ENSMUSG00000078779.5	novel	1962	4	NA	NA	1980	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9611384444561	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTTTTGTTTATTTTG	2388	False	NA	-4	True	NA	NA	NA	27540011	27556196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27540467_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.13	chr7	+	5897	4	FSM	ENSMUSG00000078779.5	ENSMUST00000108331.3	1962	4	-2250	-1685	1998	333	multi-exon	FALSE	canonical	3	101	junction_3	43.2075096353503	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTTTTGTTTATTTTG	2406	False	NA	-4	True	NA	NA	NA	27540029	27556196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.14	chr7	+	3390	1	Genic_Genomic	ENSMUSG00000078779.5	novel	NA	NA	NA	NA	10526	332	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACCTTTTTGTTTATTTT	7488	False	NA	-5	True	NA	NA	NA	27552805	27556195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_27552800_27556200
ES.30382.2	chr7	+	3843	5	NNC	ENSMUSG00000078779.5	novel	3437	5	NA	NA	-41	336	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	73.2154355310409	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTTTATTTTGCAT	367	False	NA	-1	True	NA	NA	NA	27537990	27556199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27538164_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.4	chr7	+	3726	4	NIC	ENSMUSG00000078779.5	novel	3437	5	NA	NA	-8	334	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	78.4743411709982	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTGTTTATTTTGC	400	False	NA	-3	True	NA	NA	NA	27538023	27556197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27538135_27543709_27543837_27545828_27545928_27552808
ES.30382.6	chr7	+	5589	5	FSM	ENSMUSG00000078779.5_ENSMUSG00000020420.9	ENSMUST00000205701.2	3437	5	10	-2162	10	2162	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTCAGAGTTTATTT	418	False	NA	NA	False	TATAAA	-15	NA	27538041	27558025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.7	chr7	+	2036	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	11	1390	11	-38	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGATGTGAAACTCTTT	419	False	NA	NA	False	NA	NA	NA	27538042	27554473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.8	chr7	+	4959	5	NNC	ENSMUSG00000078779.5	novel	3437	5	NA	NA	12	346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.9611384444561	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTGCTTGGTCA	420	False	NA	9	True	NA	NA	NA	27538043	27556209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27539323_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30382.9	chr7	+	3761	5	NNC	ENSMUSG00000078779.5	novel	1962	4	NA	NA	224	333	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	73.2154355310409	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTTTTGTTTATTTTG	632	False	NA	-4	True	NA	NA	NA	27538255	27556196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27538350_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ES.30383.1	chr7	-	180	1	Intergenic	novelGene_25074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACTGTAAATCGTCT	7216	False	NA	NA	False	AATAAA	-13	NA	27537926	27537746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27537700_27537900
ES.30384.1	chr7	-	3084	1	Intergenic	novelGene_25075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACATACTACAGATTAGGA	515	False	NA	NA	False	NA	NA	NA	27552678	27549594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27549600_27552700
ES.30385.1	chr7	+	3388	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	-22	145	-22	-145	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTGAGTGAGTGGAGTT	3305	False	NA	NA	False	NA	NA	NA	27559987	27580105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
ES.30385.2	chr7	+	3279	4	NIC	ENSMUSG00000020420.9	novel	3511	5	NA	NA	-16	-149	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.2807651352991	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGACTGAGTGAGTGG	3311	False	NA	NA	False	NA	NA	NA	27559993	27580101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27560182_27561961_27562015_27562813_27562941_27577190
ES.30385.3	chr7	+	3269	6	NNC	ENSMUSG00000020420.9	novel	3511	5	NA	NA	15	-154	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	23.349518196314	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGAGCAGGGACTGAGTG	3342	False	NA	NA	False	NA	NA	NA	27560024	27580096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190_27578865_27578937
ES.30385.4	chr7	+	3148	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	18	345	18	-2	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGGGCTGGCGAGATG	3345	False	NA	NA	False	NA	NA	NA	27560027	27579905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
ES.30385.5	chr7	+	8644	10	NNC	ENSMUSG00000020420.9	novel	3511	5	NA	NA	21	8671	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	27.6517139423692	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTGTATGGGTCTGCC	3348	False	NA	NA	False	NA	NA	NA	27560030	27588921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190_27579016_27581662_27581785_27581854_27584549_27584743_27585192_27585389_27587131_27587537
ES.30385.6	chr7	+	494	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	49	2968	49	-1710	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTTGATCTCAAGAT	3376	False	NA	2	True	AATAAA	-11	NA	27560058	27577282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
ES.30385.7	chr7	+	3327	4	NNC	ENSMUSG00000020420.9	novel	4031	6	NA	NA	256	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.709270666846	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGGACTGAGTGAGTG	1696	False	NA	NA	False	NA	NA	NA	27562237	27580100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27562429_27562813_27562941_27564994_27565094_27577190
ES.30385.8	chr7	+	661	1	ISM	ENSMUSG00000020420.9	ENSMUST00000205715.2	4031	6	21986	309	16956	-309	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTTGTATTCTAATG	3199	False	NA	NA	False	NA	NA	NA	27578937	27579598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27578900_27579600
ES.30386.1	chr7	-	2374	1	FSM	ENSMUSG00000108314.2	ENSMUST00000206136.2	1756	1	-243	-375	-243	375	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGATGGCCACCTTAC	NA	False	NA	NA	False	AATAAA	-39	NA	27584178	27581804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27581800_27584200
ES.30387.1	chr7	-	7315	5	NIC	ENSMUSG00000070709.13	novel	5158	4	NA	NA	-21	1979	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	17.9913173503221	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	27628906	27604837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27628719
ES.30387.10	chr7	-	6166	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCATCATGTGAC	NA	False	NA	NA	False	NA	NA	NA	27678585	27658560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.11	chr7	-	6187	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-22	-2225	2	-1	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCATCATGTGAC	NA	False	NA	NA	False	NA	NA	NA	27678594	27658560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.12	chr7	-	6098	5	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-10	-8	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	28.5864915650732	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTATTTCTTTTCATC	NA	False	NA	NA	False	NA	NA	NA	27678606	27658567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27678514
ES.30387.13	chr7	-	6088	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-14	-104	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATCGAAATAATGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	27678610	27658663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.14	chr7	-	1809	6	FSM	ENSMUSG00000063047.10	ENSMUST00000205874.2	1907	6	-9	107	-1	-107	multi-exon	FALSE	canonical	1	1	junction_1	28.3083026690051	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGATATCGAAATAATG	NA	False	NA	NA	False	AATAAA	-17	NA	27678573	27658666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27660056_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.15	chr7	-	5411	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	1	-766	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAATTAAAAAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	27678595	27659325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.16	chr7	-	4577	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	2	627	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTGAGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	27678594	27660158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.17	chr7	-	4588	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-22	-626	2	626	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTGTCTGAGTGGGC	NA	False	NA	NA	False	NA	NA	NA	27678594	27660159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.18	chr7	-	4087	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-48	-99	-24	99	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGATCTTCAATCTC	NA	False	NA	NA	False	GATAAA	-25	NA	27678620	27660686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.19	chr7	-	3983	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	3	34	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTATTATTTGTGCC	NA	False	NA	NA	False	AGTAAA	-23	NA	27678593	27660751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.2	chr7	-	7494	8	Fusion	ENSMUSG00000063047.10_ENSMUSG00000070709.13	novel	3354	5	NA	NA	-5	1979	multi-exon	FALSE	canonical	2	5	junction_4	28.977824033462	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	27678601	27604837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27671047_27671147_27673143_27673271_27674177_27674231_27678514
ES.30387.20	chr7	-	4058	7	NNC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-14	32	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	29.6296585648007	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCCTATTATTTGTG	NA	False	NA	NA	False	AGTAAA	-21	NA	27678610	27660753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678280_27678341_27678514
ES.30387.22	chr7	-	4116	6	NNC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	4	25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.3125413906982	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGTTAAAATCCTATT	NA	False	NA	NA	False	AGTAAA	-14	NA	27678592	27660760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676402_27678514
ES.30387.23	chr7	-	3732	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	-6	-226	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTAGTTTCATGAGCA	NA	False	NA	NA	False	AATACA	-10	NA	27678602	27661011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.24	chr7	-	3571	5	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	0	-267	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	28.5864915650732	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGGTCAGTGCCCATG	NA	False	NA	NA	False	AATAAA	-10	NA	27678564	27661052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27678514
ES.30387.25	chr7	-	3460	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	1	-491	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGCTAGTTGTATAA	NA	False	NA	NA	False	AATACA	-23	NA	27678595	27661276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.26	chr7	-	3342	5	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	0	-496	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	28.5864915650732	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCATCTTGCTAGTTG	NA	False	NA	NA	False	AATACA	-18	NA	27678564	27661281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27678514
ES.30387.27	chr7	-	3455	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	-14	499	10	-499	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTCTCATCTTGCTAG	NA	False	NA	NA	False	AATACA	-15	NA	27678586	27661284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.28	chr7	-	4545	5	NNC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	2	-2086	intron_retention	FALSE	canonical	1	3	junction_4	30.0613955098562	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAGCAATTAATAACTT	NA	False	NA	NA	False	AATAAA	-18	NA	27678594	27664218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27678341_27678514
ES.30387.29	chr7	-	539	7	NNC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	6	-2088	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	29.6296585648007	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATAAAGCAATTAATAAC	NA	False	NA	NA	False	AATAAA	-16	NA	27678558	27664220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678280_27678341_27678514
ES.30387.3	chr7	-	7568	9	Fusion	ENSMUSG00000063047.10_ENSMUSG00000070709.13	novel	3354	5	NA	NA	11	1975	multi-exon	FALSE	canonical	3	5	junction_4	26.0144190786571	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGCTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	27678585	27604841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.30	chr7	-	158	1	Intergenic	novelGene_25077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	27676127	27675969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27676000_27676100
ES.30387.4	chr7	-	4040	5	NIC	ENSMUSG00000070709.13	novel	5158	4	NA	NA	-21	-1296	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	17.9913173503221	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGAATGGTCTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	27628906	27608112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27628719
ES.30387.5	chr7	-	4283	9	Fusion	ENSMUSG00000063047.10_ENSMUSG00000070709.13	novel	3354	5	NA	NA	10	-1299	multi-exon	FALSE	canonical	3	5	junction_4	25.1368131432765	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGAATGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	27678586	27608115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ES.30387.6	chr7	-	4308	9	Fusion	ENSMUSG00000063047.10_ENSMUSG00000070709.13	novel	3354	5	NA	NA	-3	-1299	multi-exon	FALSE	canonical	3	5	junction_4	26.0144190786571	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGAATGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	27678599	27608115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_27611687_27620121_27620221_27625708_27625836_27626825_27626879_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ES.30387.7	chr7	-	4770	2	ISM	ENSMUSG00000070709.13	ENSMUST00000098639.9	5158	4	7532	1302	5560	-1302	3prime_fragment	FALSE	canonical	3	15	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATTTGAATGGTCT	NA	False	NA	NA	False	NA	NA	NA	27621323	27608118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27611687_27620121
ES.30387.8	chr7	-	2615	3	FSM	ENSMUSG00000070709.13	ENSMUST00000137668.2	877	3	-16	-1722	-16	2	multi-exon	FALSE	canonical	3	7	junction_2	23.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCTCTCTTATGAAGA	NA	False	NA	NA	False	NA	NA	NA	27628901	27623455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27625836_27626825_27626879_27628719
ES.30387.9	chr7	-	175	1	Intergenic	novelGene_25076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCCAATAAA	NA	False	NA	NA	False	NA	NA	NA	27655076	27654901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27654900_27655100
ES.30388.1	chr7	-	7154	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	790	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTCACGTGGAACT	NA	False	NA	NA	False	AATAAA	-23	NA	27713581	27683488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.10	chr7	-	6467	5	NIC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	378	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	64.0722248716244	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCATAGCAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	27713581	27683900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713440
ES.30388.13	chr7	-	6214	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-38	18	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTTCAAAAATTAATGG	NA	False	NA	NA	False	NA	NA	NA	27713578	27684260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
ES.30388.15	chr7	-	4802	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-29	-1548	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGATTGTATTTCTCT	NA	False	NA	NA	False	TTTAAA	-16	NA	27713569	27685828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.16	chr7	-	4066	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-82	1684	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAGTCATTGATGA	NA	False	NA	31	True	ATTAAA	-44	NA	27713622	27686452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
ES.30388.17	chr7	-	4066	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-67	1653	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	56.2259726461001	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCATTAAATATTTGT	NA	False	NA	0	True	AATAAA	-28	NA	27713607	27686483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711922_27713445
ES.30388.18	chr7	-	4058	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-29	1650	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	67.4670701568962	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	-3	True	AATAAA	-25	NA	27713569	27686486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713171_27713251_27713445
ES.30388.19	chr7	-	3975	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-31	1650	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	58.891765128921	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	-3	True	AATAAA	-25	NA	27713571	27686486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711922_27713497
ES.30388.2	chr7	-	2896	1	FSM	ENSMUSG00000096916.8	ENSMUST00000099111.4	941	1	-1273	-682	-1273	680	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATCTCATGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	27686494	27683598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27683600_27686500
ES.30388.20	chr7	-	4011	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	240	1650	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	59.4826655421561	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAGTCCATTAAATATT	NA	False	NA	-3	True	AATAAA	-25	NA	27707601	27686486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707437
ES.30388.21	chr7	-	4165	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-57	1648	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	44.8578000154067	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTGAGTCCATTAAATA	NA	False	NA	-5	True	AATAAA	-23	NA	27713597	27686488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
ES.30388.22	chr7	-	3880	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-39	1648	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.2282983323594	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTGAGTCCATTAAATA	NA	False	NA	-5	True	AATAAA	-23	NA	27713579	27686488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713437
ES.30388.24	chr7	-	4139	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-85	1646	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	57.8532626564829	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGTGAGTCCATTAAA	NA	False	NA	-7	True	AATAAA	-21	NA	27713625	27686490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713497
ES.30388.26	chr7	-	3887	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-57	1645	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	65.3657976314831	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTGTGAGTCCATTAA	NA	False	NA	-8	True	AATAAA	-20	NA	27713597	27686491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713445
ES.30388.27	chr7	-	4078	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-51	1644	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.3562363973514	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713591	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704756_27706738_27706866_27707808_27707862_27711760_27711941_27713440
ES.30388.28	chr7	-	4181	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-31	1644	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	56.6757345685867	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713571	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711922_27713445
ES.30388.29	chr7	-	4174	8	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1644	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	50.2280513543691	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27698319_27698349_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
ES.30388.3	chr7	-	6059	1	FSM	ENSMUSG00000096916.8	ENSMUST00000099111.4	941	1	-4729	-389	-4729	387	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGAGTTGTCTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	27689950	27683891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27683900_27690000
ES.30388.31	chr7	-	3984	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	203	1644	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	56.9863141464685	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713337	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713202
ES.30388.32	chr7	-	4162	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	185	1644	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	57.1423660693185	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713355	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713202
ES.30388.33	chr7	-	4019	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1644	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	60.8479434510504	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713581	27686492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27698319_27698349_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.34	chr7	-	3815	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-39	1643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.2282983323594	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTGTGAGTCCATT	NA	False	NA	-10	True	AATAAA	-18	NA	27713579	27686493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713497
ES.30388.35	chr7	-	1962	2	NNC	ENSMUSG00000096916.8	novel	2070	4	NA	NA	-3402	1643	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTGTGAGTCCATT	NA	False	NA	-10	True	AATAAA	-18	NA	27688623	27686493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27688440_27688607
ES.30388.36	chr7	-	3844	4	NNC	ENSMUSG00000096916.8	novel	2070	4	NA	NA	240	1643	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	72.6192505851965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTGTGAGTCCATT	NA	False	NA	-10	True	AATAAA	-18	NA	27707601	27686493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707437
ES.30388.37	chr7	-	4014	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	211	1643	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	74.0837364068525	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTGTGAGTCCATT	NA	False	NA	-10	True	AATAAA	-18	NA	27713329	27686493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711752_27711876_27713171
ES.30388.4	chr7	-	6746	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-39	386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	51.5873046398046	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCAGAGTTGTCTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	27713579	27683892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707810_27707862_27711760_27711876_27713440
ES.30388.40	chr7	-	4058	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-46	1642	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	58.891765128921	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAATTGTGAGTCCAT	NA	False	NA	-11	True	AATAAA	-17	NA	27713586	27686494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711941_27713440
ES.30388.41	chr7	-	3940	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-50	1642	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	58.1288224549577	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAATTGTGAGTCCAT	NA	False	NA	-11	True	AATAAA	-17	NA	27713590	27686494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713497
ES.30388.43	chr7	-	3854	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-40	1641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.4508340402427	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAATTGTGAGTCCA	NA	False	NA	-12	True	AATAAA	-16	NA	27713580	27686495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27707808_27707862_27711760_27711876_27713445
ES.30388.45	chr7	-	3860	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-73	2376	-73	1482	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTCTACAGTGTTCTT	NA	False	NA	0	True	AATAAA	-40	NA	27713613	27686654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.46	chr7	-	3713	5	NIC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1482	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	64.0722248716244	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTCTACAGTGTTCTT	NA	False	NA	0	True	AATAAA	-40	NA	27713581	27686654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713440
ES.30388.48	chr7	-	5380	5	ISM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-31	2379	-31	1479	intron_retention	FALSE	canonical	3	109	junction_4	19.6786686541544	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGCCTCTACAGTGTT	NA	False	NA	-3	True	AATAAA	-37	NA	27713571	27686657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760
ES.30388.49	chr7	-	4008	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-67	1476	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGTGGCCTCTACAGT	NA	False	NA	-6	True	AATAAA	-34	NA	27713607	27686660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.50	chr7	-	3877	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-41	1466	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	58.891765128921	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGTTCTGTAAAGTGG	NA	False	NA	-16	True	AATAAA	-24	NA	27713581	27686670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711941_27713440
ES.30388.54	chr7	-	636	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-40	5567	-40	-1709	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAAGGGCTCCAGTTTT	NA	False	NA	NA	False	TATAAA	-42	NA	27713580	27689845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.6	chr7	-	6612	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	-68	-381	-68	381	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATAGCAGAGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	27713608	27683897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ES.30388.8	chr7	-	6322	4	NNC	ENSMUSG00000096916.8	novel	2070	4	NA	NA	240	379	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	72.6192505851965	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATAGCAGAGTTGTC	NA	False	NA	NA	False	NA	NA	NA	27707601	27683899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707553
ES.30388.9	chr7	-	6629	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	-42	378	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	55.8462174189085	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCATAGCAGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	27713582	27683900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711922_27713440
ES.30389.1	chr7	-	2807	10	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	16	1306	intron_retention	TRUE	non_canonical	0	0	junction_3	975.77012320184	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACAGATGGCCAGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	27749457	27739825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27742145_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748533_27748628_27749407
ES.30389.10	chr7	-	5722	8	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	3	-3	intron_retention	FALSE	canonical	3	2255	junction_2	80.0211706681553	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTCTTAGGTGTTT	NA	False	NA	-7	True	AATAAA	-21	NA	27749478	27741134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27742152_27742233_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.12	chr7	-	1362	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	13	3	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_3	700.744182994051	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749460	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742080_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.13	chr7	-	1772	8	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	15	3	intron_retention	FALSE	canonical	3	2113	junction_2	112.91553643032	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749458	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.14	chr7	-	1462	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	2	3	intron_retention	FALSE	canonical	3	2113	junction_5	114.769764160392	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749471	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.15	chr7	-	842	8	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	822.24290070216	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749459	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742282_27748271_27748405_27748528_27748628_27749407
ES.30389.16	chr7	-	1531	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	3	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749481	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.18	chr7	-	1631	9	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	16	3	intron_retention	FALSE	canonical	3	2113	junction_4	112.155514242502	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	False	NA	-10	True	AATAAA	-18	NA	27749457	27741137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748628_27749407
ES.30389.2	chr7	-	2467	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	29	-1056	-16	1056	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAGAGGTGATCCCT	NA	False	NA	NA	False	NA	NA	NA	27749497	27740075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.20	chr7	-	1569	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	2113	junction_4	105.197990874116	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAATTTCTTCTTAGGT	NA	False	NA	-11	True	AATAAA	-17	NA	27749480	27741138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27741346_27741525_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.23	chr7	-	1385	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	707.165581741645	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTAATTTCTTCTTA	NA	False	NA	-14	True	AATAAA	-14	NA	27749489	27741141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746700_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.24	chr7	-	1366	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	707.165581741645	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTAATTTCTTCTTA	NA	False	NA	-14	True	AATAAA	-14	NA	27749480	27741141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746696_27746796_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.3	chr7	-	1511	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	-65	-6	-65	6	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTGTTTAACTCCTTT	NA	False	NA	2	True	AATAAA	-30	NA	27749591	27741125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.30389.4	chr7	-	1398	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	708.504086085606	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTCTTAGGTGTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	27749489	27741133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742145_27742229_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ES.3039.1	chr10	-	174	1	Intergenic	novelGene_2373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATAAATGATTTAG	NA	False	NA	NA	False	NA	NA	NA	69215325	69215151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69215200_69215300
ES.30390.1	chr7	+	2413	7	ISM	ENSMUSG00000047730.18	ENSMUST00000148946.8	4629	10	4156	-2	4156	0	3prime_fragment	FALSE	canonical	1	1	junction_1	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTCTCCTGCTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	27804389	27820287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27804634_27805462_27806035_27806345_27806920_27813352_27813553_27816625_27817010_27819744_27820017_27820120
ES.30391.1	chr7	+	1172	4	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	29371	-15	29371	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	4.08248290463863	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTCTCCTGCTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	27858611	27864235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27858962_27862015_27862400_27863693_27863966_27864069
ES.30391.2	chr7	+	1032	3	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	32565	-15	32565	-1	3prime_fragment	FALSE	canonical	3	5	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTCTCCTGCTGTC	1202	False	NA	NA	False	AATAAA	-14	NA	27861805	27864235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_27862400_27863693_27863966_27864069
ES.30392.1	chr7	+	178	1	Intergenic	novelGene_25078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCACCAACAGAG	4967	False	NA	NA	False	NA	NA	NA	27865570	27865748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27865600_27865700
ES.30393.1	chr7	+	1255	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	-50	-8	-50	8	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCCTATTGCTAAGTG	8481	False	NA	8	True	ATTAAA	-22	NA	27869084	27878702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.10	chr7	+	1104	10	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	827.979602539955	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTCTGGTGCCTA	8568	False	NA	-2	True	ATTAAA	-12	NA	27869171	27878692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27873980_27874033_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.11	chr7	+	1150	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	877.570572304587	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8571	False	NA	0	True	ATTAAA	-14	NA	27869174	27878694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873935_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.12	chr7	+	1328	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-17	0	intron_retention	FALSE	canonical	1	3	junction_5	1119.25649847343	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8571	False	NA	0	True	ATTAAA	-14	NA	27869174	27878694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27874112_27874209_27874504_27875279_27875451_27876567_27876701_27877323_27877404_27877629_27877743_27878322_27878469_27878555
ES.30393.13	chr7	+	1044	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	861.692375502998	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTCTGGTGCCTA	8571	False	NA	-2	True	ATTAAA	-12	NA	27869174	27878692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875346_27876573_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.14	chr7	+	1010	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	877.287857191127	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8571	False	NA	0	True	ATTAAA	-14	NA	27869174	27878694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27873965_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.2	chr7	+	1382	7	NIC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	2309	junction_1	181.317401260883	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8535	False	NA	0	True	ATTAAA	-14	NA	27869138	27878694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27869244_27873928_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.3	chr7	+	1279	8	NIC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	2113	junction_2	247.053493339861	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTCTGGTGCCTA	8538	False	NA	-2	True	ATTAAA	-12	NA	27869141	27878692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27869244_27873928_27874112_27874209_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.5	chr7	+	1278	8	NIC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	2081	junction_2	255.382546188966	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTCTGGTGCCTA	8546	False	NA	-2	True	ATTAAA	-12	NA	27869149	27878692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_27869244_27873928_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.6	chr7	+	1214	8	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_4	901.113189112132	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCTGTCTGGTGCCTAT	8548	False	NA	-1	True	ATTAAA	-13	NA	27869151	27878693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27874318_27874408_27874504_27875279_27875388_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ES.30393.8	chr7	+	1872	9	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	859.395127037034	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8559	False	NA	0	True	ATTAAA	-14	NA	27869162	27878694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27877404_27877629_27877743_27878322_27878469_27878555
ES.30393.9	chr7	+	703	6	NNC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1078.23752485248	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTGTCTGGTGCCTA	8564	False	NA	-2	True	ATTAAA	-12	NA	27869167	27878692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27869244_27873928_27874046_27876586_27876701_27877629_27877743_27878322_27878469_27878555
ES.30394.1	chr7	-	2696	2	Genic_Genomic	ENSMUSG00000109015.2	novel	2353	1	NA	NA	-532	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGAAGTTTTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	27869584	27866706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_27867351_27867532
ES.30395.1	chr7	+	2428	11	FSM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	-40	-370	-15	-1	multi-exon	TRUE	canonical	0	0	junction_8	5.57135531087365	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	NA	False	NA	NA	False	AGTAAA	-13	NA	27878878	27886718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
ES.30395.2	chr7	+	2435	12	NNC	ENSMUSG00000002409.19	novel	2534	11	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.32730375417586	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGCCTGAGCGTTTGC	NA	False	NA	NA	False	AGTAAA	-13	NA	27878907	27886718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ES.30395.3	chr7	+	2498	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	36	0	11	0	multi-exon	FALSE	canonical	2	7	junction_5	4.15210789840534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	27878929	27886719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
ES.30395.4	chr7	+	3873	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	36	-1375	11	1375	multi-exon	FALSE	canonical	2	7	junction_5	4.15210789840534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTAGGAAGTAGGCTC	NA	False	NA	NA	False	NA	NA	NA	27878929	27888094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
ES.30395.5	chr7	+	2238	11	NNC	ENSMUSG00000002409.19	novel	2018	11	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6.45058136914805	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	27878949	27886716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882560_27883705_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
ES.30396.1	chr7	+	7517	1	Intergenic	novelGene_25080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAATTTATATTTGTT	2030	False	NA	NA	False	NA	NA	NA	27889371	27896888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27889400_27896900
ES.30396.2	chr7	+	5096	1	Intergenic	novelGene_25081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCACTGGCTGCTGTG	4895	False	NA	NA	False	AATAAA	-19	NA	27892236	27897332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27892200_27897300
ES.30397.1	chr7	-	5757	1	Intergenic	novelGene_25079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTTCTGCGTGGACTCT	NA	False	NA	NA	False	NA	NA	NA	27892735	27886978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_27887000_27892700
ES.30398.1	chr7	+	179	1	Intergenic	novelGene_25082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAACATTACAT	NA	False	NA	NA	False	NA	NA	NA	27953343	27953522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27953300_27953500
ES.30399.1	chr7	+	1368	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	-80	104	-80	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTTTCTGGGATTTTAT	NA	False	NA	21	True	CATAAA	-41	NA	27967225	27968593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27967200_27968600
ES.30399.2	chr7	+	2519	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	-28	-1099	-28	1099	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGTGAAGCCGGTGT	NA	False	NA	NA	False	NA	NA	NA	27967277	27969796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27967300_27969800
ES.30399.3	chr7	+	4406	2	Genic_Genomic	ENSMUSG00000046058.8	novel	1392	1	NA	NA	-26	3073	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAGTTACAGAGGTC	NA	False	NA	NA	False	AATAAA	-11	NA	27967279	27971770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_27970065_27970149
ES.30399.4	chr7	+	3852	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	623	-3083	623	3083	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGTCTTTCTGTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	27967928	27971780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27967900_27971800
ES.30399.5	chr7	+	335	1	Intergenic	novelGene_25083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	27969603	27969938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27969600_27969900
ES.304.1	chr1	-	230	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAACAAATATACTTTC	NA	False	NA	NA	False	NA	NA	NA	37073874	37073644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_37073600_37073900
ES.3040.1	chr10	-	176	2	Antisense	novelGene_ENSMUSG00000069601.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTTATTTCACAA	NA	False	NA	NA	False	NA	NA	NA	69238516	69237941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_69238024_69238422
ES.30400.1	chr7	+	1776	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	-24	-1	-24	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGGGTTGTTTGAAAA	NA	False	NA	NA	False	AATGAA	-16	NA	27977139	27978915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977100_27978900
ES.30400.2	chr7	+	3915	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	-16	-2148	-16	2148	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGCATATGAGTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	27977147	27981062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977100_27981100
ES.30400.3	chr7	+	1313	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	-16	454	-16	-454	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAAATAGGTATCCATA	NA	False	NA	NA	False	NA	NA	NA	27977147	27978460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977100_27978500
ES.30400.4	chr7	+	2632	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	-14	-867	-14	867	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGGGGGGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	27977149	27979781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977100_27979800
ES.30400.5	chr7	+	1144	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	4	603	4	-603	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGTATGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	27977167	27978311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977200_27978300
ES.30400.6	chr7	+	4729	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	9	-2987	9	2987	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27977172	27981901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977200_27981900
ES.30400.7	chr7	+	4325	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	224	-2798	224	2798	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTAGTGGGGGCTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	27977387	27981712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_27977400_27981700
ES.30400.8	chr7	+	1057	1	Intergenic	novelGene_25084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGTAATAAC	NA	False	NA	NA	False	NA	NA	NA	27981573	27982630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_27981600_27982600
ES.30401.1	chr7	-	4041	4	NIC	ENSMUSG00000046750.19	novel	1267	6	NA	NA	471	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGTCAGCGTCTGA	NA	False	NA	NA	False	AGTAAA	-17	NA	27990140	27984077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_27987468_27987546_27987780_27987895_27987921_27989747
ES.30402.1	chr7	-	2182	9	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	9	834	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1023.02761448555	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2681	False	NA	NA	False	NA	NA	NA	28011472	28004106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007778_28007838_28009720_28009753_28010293_28010445_28011349
ES.30402.10	chr7	-	2531	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	2131	junction_6	143.770366791446	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2673	False	NA	-2	True	AATAAA	-45	NA	28011480	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28010445_28011349
ES.30402.12	chr7	-	1494	11	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	709.785890251419	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2667	False	NA	-2	True	AATAAA	-45	NA	28011486	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005447_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.14	chr7	-	5528	4	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2125	junction_3	124.461506766818	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2658	False	NA	-2	True	AATAAA	-45	NA	28011495	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28009753_28010293
ES.30402.15	chr7	-	1681	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	2125	junction_8	148.117154165291	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2684	False	NA	-2	True	AATAAA	-45	NA	28011469	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009753_28010293_28010445_28011349
ES.30402.16	chr7	-	3373	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	4	-2	intron_retention	FALSE	canonical	1	1	junction_5	794.460036754524	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	2676	False	NA	-3	True	AATAAA	-44	NA	28011477	28004942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007553_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.17	chr7	-	3461	9	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	2125	junction_7	151.926328774837	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGCCGTGTGTGGCTCT	2672	False	NA	-3	True	AATAAA	-44	NA	28011481	28004942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.18	chr7	-	1494	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTAGCTGCCGTGTGTGGC	2659	False	NA	-6	True	AATAAA	-41	NA	28011494	28004945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009711_28009753_28010293_28010445_28011349
ES.30402.19	chr7	-	2067	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	-6	intron_retention	FALSE	canonical	3	2125	junction_8	156.21740153776	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2672	False	NA	-7	True	AATAAA	-40	NA	28011481	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.2	chr7	-	2050	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	27	-562	-8	562	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGTTCTTAACTGCT	2683	False	NA	NA	False	NA	NA	NA	28011470	28004378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.20	chr7	-	2067	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	-6	intron_retention	FALSE	canonical	0	0	junction_1	767.592991109221	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2684	False	NA	-7	True	AATAAA	-40	NA	28011469	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005851_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.21	chr7	-	1485	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2673	False	NA	-7	True	AATAAA	-40	NA	28011480	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007853_28009720_28009753_28010293_28010445_28011349
ES.30402.22	chr7	-	3749	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	-6	intron_retention	FALSE	canonical	3	2125	junction_6	148.124327261023	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2672	False	NA	-7	True	AATAAA	-40	NA	28011481	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007693_28007778_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.25	chr7	-	3458	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	118	junction_3	747.973752463948	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2690	False	NA	-7	True	AATAAA	-40	NA	28011463	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007693_28007778_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.26	chr7	-	2353	9	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	2125	junction_7	164.492211061801	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	2684	False	NA	-7	True	AATAAA	-40	NA	28011469	28004946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.27	chr7	-	1479	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	800.856065407511	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTAGCTGCCGTGTGT	2681	False	NA	-9	True	AATAAA	-38	NA	28011472	28004948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28010242_28010445_28011349
ES.30402.28	chr7	-	4023	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	-8	intron_retention	FALSE	canonical	3	2125	junction_6	145.848957374905	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTAGCTGCCGTGTGT	2672	False	NA	-9	True	AATAAA	-38	NA	28011481	28004948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28007275_28007572_28007693_28007778_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.29	chr7	-	5456	5	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-19	-8	intron_retention	FALSE	canonical	3	2125	junction_4	141.580365870413	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTAGCTGCCGTGTGT	2637	False	NA	-9	True	AATAAA	-38	NA	28011516	28004948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28007693_28007778_28009753_28010293
ES.30402.3	chr7	-	1637	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	-54	-68	-54	68	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATACGATTGCTTTGTC	2602	False	NA	67	True	NA	NA	NA	28011551	28004872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.30	chr7	-	3882	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	2171	junction_4	107.009822169819	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTAGCTGCCGTGTGT	2683	False	NA	-9	True	AATAAA	-38	NA	28011470	28004948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28010445_28011349
ES.30402.31	chr7	-	1787	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	-9	intron_retention	FALSE	canonical	3	2125	junction_8	157.858586504926	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCCTAGCTGCCGTGTG	2673	False	NA	-10	True	AATAAA	-37	NA	28011480	28004949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.34	chr7	-	1769	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	-27	intron_retention	FALSE	canonical	3	118	junction_3	705.583673980382	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGCCTCGAGGGCTGT	2692	False	NA	-28	True	AATAAA	-19	NA	28011461	28004967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.35	chr7	-	1479	11	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	-28	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	675.523767161452	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCCGCCTCGAGGGCTG	2683	False	NA	-29	True	AATAAA	-18	NA	28011470	28004968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.36	chr7	-	3356	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	-30	intron_retention	FALSE	canonical	3	118	junction_3	754.674091495793	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCCGCCTCGAGGGC	2665	False	NA	-31	True	AATAAA	-16	NA	28011488	28004970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007275_28007572_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.37	chr7	-	1248	10	ISM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	1087	85	954	-85	3prime_fragment	FALSE	canonical	3	2125	junction_9	143.83023257462	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGGCTCTGGACTCC	3743	False	NA	-86	True	AAGAAA	-27	NA	28010410	28005025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293
ES.30402.38	chr7	-	4256	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	2125	junction_6	142.977562342255	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2673	False	NA	0	True	AATAAA	-21	NA	28011480	28005246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28009753_28010293
ES.30402.39	chr7	-	4108	6	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	2125	junction_4	155.662969263727	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2673	False	NA	0	True	AATAAA	-21	NA	28011480	28005246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.4	chr7	-	3657	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	2125	junction_6	145.195856465306	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2672	False	NA	-2	True	AATAAA	-45	NA	28011481	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.40	chr7	-	5467	5	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	2162	junction_4	131.476946648452	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2674	False	NA	0	True	AATAAA	-21	NA	28011479	28005246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28007693_28007778_28009526_28009720
ES.30402.41	chr7	-	3633	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	2	intron_retention	FALSE	canonical	3	2125	junction_5	144.329099245055	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2683	False	NA	0	True	AATAAA	-21	NA	28011470	28005246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.42	chr7	-	3915	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	2	intron_retention	FALSE	canonical	3	2125	junction_5	156.105110600376	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTCCAGAGTCCAG	2683	False	NA	0	True	AATAAA	-21	NA	28011470	28005246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28007077_28007169_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.43	chr7	-	1201	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGTGTCCAGAGTCCA	2663	False	NA	-1	True	AATAAA	-20	NA	28011490	28005247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ES.30402.45	chr7	-	1227	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	-20	308	-20	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2636	False	NA	-2	True	AATAAA	-19	NA	28011517	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.46	chr7	-	3611	8	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_5	849.043471399746	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2673	False	NA	-2	True	AATAAA	-19	NA	28011480	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007553_28007693_28007778_28010445_28011349
ES.30402.47	chr7	-	3597	8	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	2171	junction_4	107.009822169819	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2668	False	NA	-2	True	AATAAA	-19	NA	28011485	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28010445_28011349
ES.30402.48	chr7	-	1222	11	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	711.24502810213	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2660	False	NA	-2	True	AATAAA	-19	NA	28011493	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007553_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.49	chr7	-	4407	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	2125	junction_6	141.209556648581	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2796	False	NA	-2	True	AATAAA	-19	NA	28011357	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28007077_28007169_28007275_28007572_28007693_28007778_28009753_28010293
ES.30402.5	chr7	-	3348	9	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	2125	junction_7	135.818295435482	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2683	False	NA	-2	True	AATAAA	-45	NA	28011470	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.52	chr7	-	1459	9	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	786.560391832693	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2690	False	NA	-2	True	AATAAA	-19	NA	28011463	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007854_28009720_28009753_28010293_28010445_28011349
ES.30402.53	chr7	-	1178	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2672	False	NA	-2	True	AATAAA	-19	NA	28011481	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009711_28009753_28010293_28010445_28011349
ES.30402.54	chr7	-	1488	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	2125	junction_8	157.858586504926	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2673	False	NA	-2	True	AATAAA	-19	NA	28011480	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.56	chr7	-	1190	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2667	False	NA	-2	True	AATAAA	-19	NA	28011486	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007854_28009720_28009753_28010293_28010445_28011349
ES.30402.57	chr7	-	1497	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	118	junction_3	705.583673980382	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2683	False	NA	-2	True	AATAAA	-19	NA	28011470	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.59	chr7	-	3424	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	2125	junction_5	152.897205846136	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2684	False	NA	-2	True	AATAAA	-19	NA	28011469	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28009753_28010293_28010445_28011349
ES.30402.6	chr7	-	1499	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	755.088188782943	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2671	False	NA	-2	True	AATAAA	-45	NA	28011482	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ES.30402.60	chr7	-	4215	6	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	2125	junction_4	155.589716883861	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2673	False	NA	-2	True	AATAAA	-19	NA	28011480	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28007077_28007169_28007693_28007778_28009753_28010293_28010445_28011349
ES.30402.61	chr7	-	4943	3	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	2409	junction_1	52.5	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2665	False	NA	-2	True	AATAAA	-19	NA	28011488	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28010445_28011349
ES.30402.62	chr7	-	1404	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-3	0	intron_retention	FALSE	canonical	2	23	junction_5	950.563900216635	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2669	False	NA	-2	True	AATAAA	-19	NA	28011484	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006958_28007077_28007169_28007275_28007576_28007693_28007778_28007838_28009503_28009753_28010293_28010445_28011349
ES.30402.63	chr7	-	3155	9	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2125	junction_7	151.926328774837	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2672	False	NA	-2	True	AATAAA	-19	NA	28011481	28005248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.64	chr7	-	4155	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	2171	junction_3	115.583543619131	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGCCTGTGTCCAGAGTC	2683	False	NA	-3	True	AATAAA	-18	NA	28011470	28005249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28007077_28007169_28007275_28007572_28007693_28007778_28010445_28011349
ES.30402.66	chr7	-	1479	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2125	junction_8	144.948862843094	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCCTGTGTCCAGAGT	2674	False	NA	-4	True	AATAAA	-17	NA	28011479	28005250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.67	chr7	-	1498	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	1	-3	intron_retention	FALSE	canonical	1	1	junction_4	735.043578115199	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATGCCTGTGTCCAGAG	2673	False	NA	-5	True	AATAAA	-16	NA	28011480	28005251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007275_28007553_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.68	chr7	-	3885	7	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	2	-4	intron_retention	FALSE	canonical	3	2171	junction_4	114.574090536309	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAATGCCTGTGTCCAGA	2674	False	NA	-6	True	AATAAA	-15	NA	28011479	28005252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28010445_28011349
ES.30402.7	chr7	-	1761	10	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	6	-1	intron_retention	FALSE	canonical	2	23	junction_4	728.263230798681	708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2697	False	NA	-2	True	AATAAA	-45	NA	28011456	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28007275_28007576_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30402.8	chr7	-	5299	5	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	2162	junction_4	119.567972300278	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2659	False	NA	-2	True	AATAAA	-45	NA	28011494	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28005456_28005847_28006404_28006977_28007077_28007169_28009526_28009720
ES.30402.9	chr7	-	1506	11	NNC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	711.24502810213	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCCGTGTGTGGCTCTG	2683	False	NA	-2	True	AATAAA	-45	NA	28011470	28004941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007553_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ES.30403.1	chr7	+	178	1	Intergenic	novelGene_25085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATGTAT	NA	False	NA	NA	False	NA	NA	NA	28013189	28013367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28013200_28013400
ES.30404.1	chr7	+	176	1	Intergenic	novelGene_25086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATTTTTATG	NA	False	NA	NA	False	NA	NA	NA	28027112	28027288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28027100_28027300
ES.30405.10	chr7	-	3398	4	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	228	0	intron_retention	FALSE	canonical	3	767	junction_3	98.0657375890728	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28017989	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28016315_28016410_28016539_28016640
ES.30405.100	chr7	-	3572	27	NNC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	211.896019492871	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038108	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28037776
ES.30405.104	chr7	-	5861	24	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	canonical	3	628	junction_23	75.4625810201023	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038178	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.105	chr7	-	6179	26	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_22	165.020027875407	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038167	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28018290_28018379_28018527_28019391_28019539_28019644_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.106	chr7	-	3553	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	206.096532266423	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038197	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028903_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.107	chr7	-	4370	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_24	159.10201539627	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038142	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.108	chr7	-	3773	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_24	245.805157763197	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038178	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025142_28025210_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.110	chr7	-	3553	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	206.231653482096	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038203	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021984_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28030000_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.111	chr7	-	3495	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	206.209210561527	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038143	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018275_28018375_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.113	chr7	-	4068	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_8	156.547879322615	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTGTGTACGAAG	NA	False	NA	-17	True	AATAAA	-12	NA	28038183	28014324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016845_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.117	chr7	-	3167	9	NIC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	206	34	intron_retention	FALSE	canonical	3	680	junction_6	55.6686626388671	809	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTAGGCTGTGGCCTG	NA	False	NA	NA	False	NA	NA	NA	28037925	28023701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776
ES.30405.118	chr7	-	261	3	ISM	ENSMUSG00000003435.10	ENSMUST00000207563.2	3640	31	29	22979	2	-11827	5prime_fragment	FALSE	canonical	2	27	junction_1	300.5	746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGAGAGACTCCCAG	NA	False	NA	NA	False	AATAAA	-10	NA	28038142	28037294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28037449_28037776_28037861_28038119
ES.30405.12	chr7	-	4486	28	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-28	0	intron_retention	FALSE	canonical	3	628	junction_27	72.0758821287432	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038199	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.15	chr7	-	3573	30	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	236.761468287465	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTACGAAGAGTTTTC	NA	False	NA	-10	True	AATAAA	-19	NA	28038178	28014317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037423_28037449_28037776_28037861_28038119
ES.30405.18	chr7	-	3556	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	156.353178178541	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038193	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.2	chr7	-	4026	28	NIC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	-75	2	intron_retention	FALSE	canonical	2	5	junction_20	206.812015793433	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGAAGAGTTTTCTTGG	NA	False	NA	-6	True	AATAAA	-23	NA	28030954	28014313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025142_28025210_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794
ES.30405.20	chr7	-	6808	23	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_19	175.044014535754	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038163	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28016315_28016410_28016539_28016640_28018290_28018379_28018527_28019391_28019539_28019644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.21	chr7	-	5538	26	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_4	255.754738763527	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015751_28016110_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.22	chr7	-	3569	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038203	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029087_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.23	chr7	-	3783	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_24	159.087443925707	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.26	chr7	-	3548	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029991_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.27	chr7	-	3539	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	208.962365590544	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028215_28028675_28028750_28028840_28028910_28029007_28029087_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.3	chr7	-	3696	29	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-153	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038324	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.30	chr7	-	3277	27	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	247.052362511443	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038164	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.31	chr7	-	3550	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	156.353178178541	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029093_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.36	chr7	-	3656	29	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_24	240.925349921286	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038171	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037423_28037449_28037776_28037861_28038119
ES.30405.37	chr7	-	3479	27	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_23	212.134405312198	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.38	chr7	-	2564	7	NIC	ENSMUSG00000003435.10	novel	3096	22	NA	NA	93	0	intron_retention	FALSE	canonical	3	9	junction_4	319.631037291437	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28018124	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640
ES.30405.39	chr7	-	3532	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	206.185843453949	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038169	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029080_28029998_28030071_28030794_28030949_28037772_28037861_28038119
ES.30405.4	chr7	-	2902	24	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-214	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	168.843491919899	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28029062	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007
ES.30405.40	chr7	-	3629	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_24	159.110567969278	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038169	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.41	chr7	-	3586	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	206.228090982301	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038181	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023444_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.42	chr7	-	6348	10	NIC	ENSMUSG00000003435.10	novel	3096	22	NA	NA	-4434	0	intron_retention	FALSE	canonical	3	668	junction_9	96.021345363581	895	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28022651	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28019539_28019644
ES.30405.44	chr7	-	3570	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	202.04978612072	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038182	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014889_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.45	chr7	-	3526	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	206.231653482096	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023171_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.46	chr7	-	3617	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_11	209.73934440775	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019389_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.47	chr7	-	3535	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	204.677421663396	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029998_28030071_28030800_28030955_28037776_28037861_28038119
ES.30405.51	chr7	-	3385	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	208.169413702151	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038178	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029087_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.53	chr7	-	5188	24	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-753	0	intron_retention	FALSE	canonical	3	668	junction_12	71.856662615187	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28029601	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442
ES.30405.54	chr7	-	7350	18	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	259.206908575538	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038133	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015347_28015433_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28021739_28021888_28021995_28023150_28023408_28025374_28025627_28028127_28028197_28028444_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776
ES.30405.55	chr7	-	3889	30	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	265.574131836281	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038180	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28016110_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ES.30405.56	chr7	-	3522	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	204.677421663396	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038166	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030058_28030794_28030955_28037776_28037861_28038119
ES.30405.57	chr7	-	4159	28	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-5	0	intron_retention	FALSE	canonical	3	628	junction_27	72.5348409731962	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038149	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.58	chr7	-	4478	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_26	202.955016002089	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038169	28014318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28030071_28030794_28030955_28037423_28037449_28037776_28037861_28038119
ES.30405.59	chr7	-	3453	30	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	202.671568223056	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGTACGAAGAGTTT	NA	False	NA	-12	True	AATAAA	-17	NA	28038148	28014319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030852_28030914_28030955_28037776_28037861_28038119
ES.30405.60	chr7	-	1640	13	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	305.289605220282	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038178	28014321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016427_28028844_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.61	chr7	-	4167	24	NNC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	-39	1	intron_retention	TRUE	non_canonical	0	0	junction_19	169.812539810076	898	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28028887	28014321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023785_28024655_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840
ES.30405.62	chr7	-	10295	14	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-8	1	intron_retention	FALSE	canonical	3	628	junction_13	87.2463695180656	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGTGTACGAAGAGT	NA	False	NA	-14	True	AATAAA	-15	NA	28038179	28014321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28019539_28019644_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.64	chr7	-	3526	28	NNC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	240.200933262533	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038178	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014416_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016406_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776
ES.30405.65	chr7	-	3442	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	157.820416773678	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038183	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28030828_28030955_28037776_28037861_28038119
ES.30405.67	chr7	-	3524	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	241.384378880132	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038169	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018523_28019389_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28030000_28030065_28030794_28030955_28037776_28037861_28038119
ES.30405.68	chr7	-	4008	1	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-113	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	895	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28018330	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014300_28018300
ES.30405.7	chr7	-	3559	29	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_25	152.559502443192	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038199	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.71	chr7	-	4264	29	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-7	0	intron_retention	FALSE	canonical	1	1	junction_26	202.854511426595	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038178	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ES.30405.73	chr7	-	3504	28	NNC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	209.515222019517	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038167	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28038063
ES.30405.74	chr7	-	6268	27	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	279.026880425525	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038169	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28018290_28018379_28018527_28019389_28019539_28019644_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ES.30405.8	chr7	-	3645	26	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	270	0	intron_retention	FALSE	canonical	3	23	junction_23	160.018368945568	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28037861	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776
ES.30405.80	chr7	-	4284	29	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_26	202.862009498968	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038181	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ES.30405.81	chr7	-	3399	29	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	205.98205229424	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038169	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015217_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.82	chr7	-	3626	28	NNC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	270	0	intron_retention	FALSE	non_canonical	0	0	junction_25	245.668473004287	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28037861	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025142_28025210_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776
ES.30405.83	chr7	-	3591	30	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	237.291845073544	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038159	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025142_28025210_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.84	chr7	-	3694	29	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_25	241.465667057135	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038171	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025142_28025210_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.85	chr7	-	3796	28	NNC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_23	245.152129359491	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038169	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037351_28037449_28037776_28037861_28038119
ES.30405.86	chr7	-	3383	28	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	208.169413702151	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038177	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.9	chr7	-	4300	28	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	12	0	intron_retention	FALSE	canonical	3	668	junction_13	69.4016954841653	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACGAAGAGTTTTCTT	NA	False	NA	-8	True	AATAAA	-21	NA	28038119	28014315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776
ES.30405.94	chr7	-	5235	27	NNC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_23	161.892889566861	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038169	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029084_28029998_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.96	chr7	-	4873	26	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	-7	0	intron_retention	FALSE	canonical	3	9	junction_4	163.337197233208	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038178	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30405.97	chr7	-	5107	26	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	8	0	intron_retention	FALSE	canonical	3	628	junction_25	75.5600317628308	900	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038163	28014322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28030071_28030794_28030955_28037776_28037861_28038119
ES.30406.1	chr7	+	657	1	Intergenic	novelGene_25087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	28038752	28039409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28038800_28039400
ES.30406.2	chr7	+	180	1	Intergenic	novelGene_25088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	28038759	28038939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28038800_28038900
ES.30407.1	chr7	+	610	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	43	456	43	3	multi-exon	FALSE	canonical	3	19383	junction_3	806.134294023024	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGTTGGTCTCTTT	NA	False	NA	3	True	AATAAA	-24	NA	28050119	28052124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
ES.30407.10	chr7	+	535	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9050.9191349553	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTTTTGTGTTGGTC	NA	False	NA	-2	True	AATAAA	-19	NA	28050173	28052119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050519_28051601_28051683_28051787_28051836_28051918
ES.30407.11	chr7	+	1808	2	ISM	ENSMUSG00000037563.16	ENSMUST00000152918.8	628	4	-14	0	-14	0	intron_retention	FALSE	canonical	3	20881	junction_1	0	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28050277_28050416
ES.30407.12	chr7	+	1859	2	NIC	ENSMUSG00000037563.16	novel	518	4	NA	NA	-14	0	intron_retention	FALSE	canonical	3	19383	junction_1	0	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28051699_28051787
ES.30407.14	chr7	+	1636	4	NIC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-14	0	intron_retention	FALSE	canonical	3	19383	junction_2	612.04702070638	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28050277_28050416_28051699_28051787_28051836_28051918
ES.30407.16	chr7	+	548	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8956.85617278741	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTTGTGTTGGTCT	NA	False	NA	-1	True	AATAAA	-20	NA	28050174	28052120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051840_28051925
ES.30407.17	chr7	+	641	4	FSM	ENSMUSG00000037563.16	ENSMUST00000152918.8	628	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	20184	junction_3	558.517283130572	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050174	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28050277_28050416_28050519_28051601_28051836_28051918
ES.30407.18	chr7	+	515	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8741.0029458867	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050205	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050519_28051607_28051699_28051787_28051836_28051918
ES.30407.3	chr7	+	565	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-48	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8956.85617278741	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTTCCTGTTTTTGTGTT	NA	False	NA	-6	True	AATAAA	-15	NA	28050139	28052115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051820_28051918
ES.30407.4	chr7	+	560	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8741.0029458867	914	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTTTTGTGTTGGTC	NA	False	NA	-2	True	AATAAA	-19	NA	28050157	28052119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050512_28051601_28051699_28051787_28051836_28051918
ES.30407.5	chr7	+	624	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8741.0029458867	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTTGTGTTGGTCT	NA	False	NA	-1	True	AATAAA	-20	NA	28050172	28052120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28050277_28050416_28050590_28051601_28051699_28051787_28051836_28051918
ES.30407.6	chr7	+	693	4	FSM	ENSMUSG00000037563.16	ENSMUST00000155805.2	518	4	-175	0	-14	0	multi-exon	FALSE	canonical	3	19383	junction_2	895.518844022838	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28050519_28051601_28051699_28051787_28051836_28051918
ES.30407.8	chr7	+	451	4	NIC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	832	junction_1	8939.80552858332	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28050277_28051601_28051699_28051787_28051836_28051918
ES.30407.9	chr7	+	1948	1	FSM	ENSMUSG00000077711.3	ENSMUST00000104523.3	125	1	-759	-1064	-759	1064	mono-exon	FALSE	NA	NA	NA	NA	NA	914	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050173	28052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28050200_28052100
ES.30408.1	chr7	+	3255	16	Fusion	ENSMUSG00000109455.2_ENSMUSG00000003437.15	novel	2003	14	NA	NA	-7098	135	multi-exon	FALSE	canonical	0	0	junction_1	78.4744544421941	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTTGTTTTTTTT	70	False	NA	NA	False	AAGAAA	-21	NA	28071306	28098948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28071526_28073471_28073584_28091593_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095817_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.10	chr7	+	2029	12	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	21	-10	intron_retention	FALSE	canonical	0	0	junction_1	58.5232877290021	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTGACTTCATCTCC	601	False	NA	5	True	AATAAA	-6	NA	28092407	28098798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28092680_28094439_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.13	chr7	+	1647	12	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	57.3066277735556	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	604	False	NA	14	True	AATAAA	-15	NA	28092410	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096120_28098131_28098175_28098250
ES.30408.15	chr7	+	2035	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	27	-1	intron_retention	FALSE	canonical	3	164	junction_5	17.6562469272367	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	607	False	NA	14	True	AATAAA	-15	NA	28092413	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.16	chr7	+	2132	12	NIC	ENSMUSG00000003437.15	novel	1997	13	NA	NA	27	-1	intron_retention	FALSE	canonical	3	164	junction_4	15.9736353030044	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	607	False	NA	19	True	AATAAA	-20	NA	28092413	28098812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28095121_28095195_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.17	chr7	+	1929	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	27	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	56.1758152786608	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	607	False	NA	14	True	AATAAA	-15	NA	28092413	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.19	chr7	+	2040	13	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	38	1	27	-1	intron_retention	FALSE	canonical	3	164	junction_5	17.4539075535792	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	607	False	NA	19	True	AATAAA	-20	NA	28092413	28098812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083
ES.30408.2	chr7	+	3151	15	Fusion	ENSMUSG00000109455.2_ENSMUSG00000003437.15	novel	2003	14	NA	NA	-2431	228	multi-exon	FALSE	canonical	0	0	junction_1	52.3079577978303	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGTTACTCAAAGCTG	632	False	NA	NA	False	NA	NA	NA	28075973	28099041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28076112_28091593_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.20	chr7	+	3673	10	NIC	ENSMUSG00000003437.15	novel	1997	13	NA	NA	-27	0	intron_retention	FALSE	canonical	3	173	junction_4	15.7134840263677	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTCCTAAAGTCTCT	632	False	NA	15	True	AATAAA	-16	NA	28092438	28098808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28097979_28098083_28098175_28098250
ES.30408.21	chr7	+	3546	11	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	10	-1	intron_retention	FALSE	canonical	3	173	junction_4	16.4769536019253	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	669	False	NA	14	True	AATAAA	-15	NA	28092475	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28097979_28098083
ES.30408.22	chr7	+	1526	11	NNC	ENSMUSG00000003437.15	novel	1997	13	NA	NA	280	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.8286494830537	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCATCTCCTAAAGTC	874	False	NA	12	True	AATAAA	-13	NA	28094467	28098805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28094561_28095066_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.23	chr7	+	3992	1	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	-34	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	1222	False	NA	14	True	AATAAA	-15	NA	28094815	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28094800_28098800
ES.30408.24	chr7	+	1571	9	NIC	ENSMUSG00000003437.15	novel	1997	13	NA	NA	156	-1	intron_retention	FALSE	canonical	3	173	junction_1	9.84171605971235	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	1412	False	NA	14	True	AATAAA	-15	NA	28095005	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.25	chr7	+	732	2	ISM	ENSMUSG00000003437.15	ENSMUST00000146913.2	446	3	143	-324	143	1	3prime_fragment	FALSE	canonical	3	202	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTCCTAAAGTCTCTG	4408	False	NA	16	True	AATAAA	-17	NA	28098001	28098809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28098175_28098250
ES.30408.3	chr7	+	3610	12	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	-37	2	intron_retention	FALSE	canonical	3	173	junction_4	15.8817947650345	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCTAAAGTCTCTGT	532	False	NA	17	True	AATAAA	-18	NA	28092338	28098810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28097979_28098083_28098175_28098250
ES.30408.4	chr7	+	2025	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	-23	1	-23	-1	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTAAAGTCTCTGTTC	546	False	NA	19	True	AATAAA	-20	NA	28092352	28098812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.5	chr7	+	2246	11	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	173	junction_4	16.658031096141	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	547	False	NA	14	True	AATAAA	-15	NA	28092353	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083
ES.30408.6	chr7	+	2211	13	FSM	ENSMUSG00000003437.15	ENSMUST00000122857.8	1997	13	-77	-137	2	132	multi-exon	FALSE	canonical	3	164	junction_4	16.6205612286576	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTTGTTTTTGTTTTT	582	False	NA	NA	False	AAGAAA	-18	NA	28092388	28098945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.7	chr7	+	1995	14	NNC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	51.5903298126453	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCATCTCCTAAAGTC	587	False	NA	12	True	AATAAA	-13	NA	28092393	28098805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094824_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30408.8	chr7	+	3381	12	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_2	55.3505731714968	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	590	False	NA	14	True	AATAAA	-15	NA	28092396	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28097979_28098083_28098175_28098250
ES.30408.9	chr7	+	2047	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	14	-1	intron_retention	FALSE	canonical	3	173	junction_4	15.3803626600791	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	594	False	NA	14	True	AATAAA	-15	NA	28092400	28098807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ES.30409.1	chr7	+	199	1	Intergenic	novelGene_25093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATCTCCAAAATTGAA	4887	False	NA	NA	False	NA	NA	NA	28125415	28125614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28125400_28125600
ES.3041.1	chr10	-	175	1	Intergenic	novelGene_2374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	69252417	69252242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69252200_69252400
ES.30410.1	chr7	+	237	1	Intergenic	novelGene_25094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCGGGCGTGGTGGCGCA	7640	False	NA	NA	False	AAAAAG	-8	NA	28128168	28128405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28128200_28128400
ES.30411.1	chr7	-	5284	19	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-47	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	9.46272740157631	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGCCTTTCTTGAGG	NA	False	NA	1	True	NA	NA	NA	28072071	28059026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070302_28070468_28070539_28070756_28071284
ES.30411.12	chr7	-	5422	19	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9.46272740157631	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28072074	28059029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070302_28070468_28070539_28070671_28071061
ES.30411.13	chr7	-	5065	19	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	9.55830063929311	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28072000	28059029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071061_28071164_28071284
ES.30411.14	chr7	-	5183	17	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-58	0	intron_retention	FALSE	non_canonical	0	0	junction_3	7.98827265433523	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28072082	28059029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071284
ES.30411.15	chr7	-	5151	18	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.893059383042	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTTTTGCCTTTCTT	NA	False	NA	-3	True	NA	NA	NA	28071965	28059030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062427_28063880_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071061
ES.30411.16	chr7	-	8277	15	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	2	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	8.98780352727506	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTGTTTTGCCT	NA	False	NA	-8	True	NA	NA	NA	28072000	28059035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062435_28063891_28063937_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662
ES.30411.17	chr7	-	5241	18	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	-37	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.893059383042	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTGTTTTGCCT	NA	False	NA	-8	True	NA	NA	NA	28072061	28059035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071061
ES.30411.2	chr7	-	5217	19	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-63	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.3483198575788	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072087	28059027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070302_28070468_28070539_28070671_28071284
ES.30411.3	chr7	-	5082	18	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	-93	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.75177175863195	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072117	28059027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071284
ES.30411.5	chr7	-	7839	15	NNC	ENSMUSG00000037552.18	novel	5511	19	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_3	7.64118806875219	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072030	28059027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28070671_28071284
ES.30411.7	chr7	-	5319	18	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	-93	1	intron_retention	FALSE	non_canonical	0	0	junction_3	7.97096808298282	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072117	28059027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070302_28070671_28071284
ES.30411.8	chr7	-	5519	18	NNC	ENSMUSG00000037552.18	novel	3721	19	NA	NA	-73	1	intron_retention	FALSE	non_canonical	0	0	junction_3	9.2739916117724	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGCCTTTCTTGAG	NA	False	NA	0	True	NA	NA	NA	28072097	28059027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070302_28070671_28071061
ES.30411.9	chr7	-	5234	19	NNC	ENSMUSG00000037552.18	novel	4623	19	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.55573592883456	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTTGCCTTTCTTGA	NA	False	NA	-1	True	NA	NA	NA	28072090	28059028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28060687_28061232_28062134_28062250_28062437_28063891_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070287_28070468_28070539_28070671_28071284
ES.30412.1	chr7	-	305	1	Intergenic	novelGene_25089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	28074625	28074320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28074300_28074600
ES.30412.2	chr7	-	177	1	Intergenic	novelGene_25090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCTCGTTAGCCGGTC	NA	False	NA	NA	False	NA	NA	NA	28074623	28074446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28074400_28074600
ES.30413.1	chr7	-	2263	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	527	0	-471	0	multi-exon	FALSE	canonical	3	36	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAATTTGTCTTTTTC	6200	False	NA	-2	True	AATAAA	-18	NA	28079151	28076208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28077919_28078598
ES.30414.1	chr7	-	2152	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	26	-897	26	897	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTCTGAATCTGA	NA	False	NA	NA	False	NA	NA	NA	28092107	28084673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ES.30414.2	chr7	-	679	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	19	583	19	-583	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGCTGATTTGTCC	NA	False	NA	-12	True	AATGAA	-26	NA	28092114	28086153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ES.30414.3	chr7	-	773	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	19	-594	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGGTGGTTCCTGTTG	NA	False	NA	-23	True	AATGAA	-15	NA	28092114	28086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
ES.30414.4	chr7	-	234	1	Intergenic	novelGene_25091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTTTTTTTAAC	NA	False	NA	NA	False	NA	NA	NA	28086984	28086750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28086800_28087000
ES.30415.1	chr7	-	5176	6	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-2385	2214	intron_retention	FALSE	canonical	3	500	junction_3	19.4381069037085	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGGTTTATGGCATTA	9514	False	NA	NA	False	NA	NA	NA	28105841	28096732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793
ES.30415.10	chr7	-	4723	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-93	7	intron_retention	FALSE	canonical	0	0	junction_4	147.216655992632	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6507	False	NA	-1	True	NA	NA	NA	28135745	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105023_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.12	chr7	-	4860	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-79	7	intron_retention	FALSE	canonical	0	0	junction_10	187.57235640917	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6521	False	NA	-1	True	NA	NA	NA	28135731	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28116479_28116621_28122860_28123263_28135562
ES.30415.13	chr7	-	4645	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-60	7	intron_retention	FALSE	canonical	3	219	junction_1	88.8771089531369	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6540	False	NA	-1	True	NA	NA	NA	28135712	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.14	chr7	-	4642	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-865	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	156.845908103746	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	5735	False	NA	-1	True	NA	NA	NA	28136517	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28136219
ES.30415.15	chr7	-	4103	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-71	7	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	160.107556823737	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6529	False	NA	-1	True	NA	NA	NA	28135723	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28135562
ES.30415.16	chr7	-	4495	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-57	7	intron_retention	FALSE	non_canonical	0	0	junction_10	146.605728637804	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6543	False	NA	-1	True	NA	NA	NA	28135709	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113712_28123006_28123263_28135562
ES.30415.17	chr7	-	4573	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-57	7	intron_retention	FALSE	canonical	2	6	junction_1	148.911248735614	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6543	False	NA	-1	True	NA	NA	NA	28135709	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.19	chr7	-	4348	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-79	7	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_9	152.446712001276	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6521	False	NA	-1	True	NA	NA	NA	28135731	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.2	chr7	-	177	1	Intergenic	novelGene_25092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	28097020	28096843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28096800_28097000
ES.30415.20	chr7	-	5065	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-79	7	intron_retention	FALSE	canonical	3	429	junction_10	37.9320445006593	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6521	False	NA	-1	True	NA	NA	NA	28135731	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.21	chr7	-	3428	6	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-86	7	intron_retention	TRUE	non_canonical	0	0	junction_3	209.372968646862	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6514	False	NA	-1	True	NA	NA	NA	28135738	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103418_28113563_28113768_28122860_28123263_28135562
ES.30415.22	chr7	-	5927	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-67	7	intron_retention	FALSE	canonical	3	219	junction_1	88.7092008421313	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6533	False	NA	-1	True	NA	NA	NA	28135719	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.23	chr7	-	6399	10	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-73	7	intron_retention	FALSE	canonical	3	219	junction_1	94.3430828622354	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6527	False	NA	-1	True	NA	NA	NA	28135725	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.24	chr7	-	4302	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-64	7	intron_retention	FALSE	canonical	1	4	junction_10	152.423128166299	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6536	False	NA	-1	True	NA	NA	NA	28135716	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28135562
ES.30415.25	chr7	-	4515	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.880307728976	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAAGACTCTTCATT	6534	False	NA	-10	True	NA	NA	NA	28135718	28098948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105057_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.26	chr7	-	4463	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.7842837245	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6543	False	NA	-35	True	NA	NA	NA	28135709	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105787_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.27	chr7	-	4305	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.7842837245	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6515	False	NA	-35	True	NA	NA	NA	28135737	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105973_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.29	chr7	-	2031	4	NNC	ENSMUSG00000109336.2	novel	4349	13	NA	NA	104	0	intron_retention	FALSE	non_canonical	0	0	junction_1	254.679319057429	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	NA	False	NA	-35	True	NA	NA	NA	28103352	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28099133_28099648_28101333_28103044_28103169_28103288
ES.30415.3	chr7	-	5552	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-96	1194	intron_retention	FALSE	canonical	2	13	junction_9	152.446712001276	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGTATTTCGGGTTT	6504	False	NA	NA	False	NA	NA	NA	28135748	28097752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.30	chr7	-	4310	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	0	intron_retention	FALSE	canonical	1	2	junction_10	146.047484636316	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6534	False	NA	-35	True	NA	NA	NA	28135718	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28123222_28123263_28135562
ES.30415.31	chr7	-	5507	10	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-67	0	intron_retention	FALSE	canonical	3	219	junction_1	96.5410422540909	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6533	False	NA	-35	True	NA	NA	NA	28135719	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105465_28105793_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.34	chr7	-	4477	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	156.044776337506	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6504	False	NA	-35	True	NA	NA	NA	28135748	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104932_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.35	chr7	-	4112	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	153.757633053524	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6526	False	NA	-35	True	NA	NA	NA	28135726	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28123222_28123263_28135562
ES.30415.36	chr7	-	4269	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.494712377532	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6526	False	NA	-35	True	NA	NA	NA	28135726	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28100838_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.37	chr7	-	5215	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	0	intron_retention	FALSE	canonical	3	429	junction_10	36.315974446516	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6534	False	NA	-35	True	NA	NA	NA	28135718	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.38	chr7	-	2473	3	NNC	ENSMUSG00000109336.2	novel	4349	13	NA	NA	-3950	0	intron_retention	FALSE	canonical	0	0	junction_2	278	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	7949	False	NA	-35	True	NA	NA	NA	28107406	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103113_28107360
ES.30415.39	chr7	-	4371	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-57	0	intron_retention	FALSE	canonical	1	1	junction_11	142.227126651548	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6543	False	NA	-35	True	NA	NA	NA	28135709	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28122931_28123222_28123263_28135562
ES.30415.4	chr7	-	4570	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-163	-16	-127	16	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTATGATGCATTTC	6473	False	NA	8	True	NA	NA	NA	28135779	28098930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.40	chr7	-	2826	6	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	208.88331671055	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	6534	False	NA	-35	True	NA	NA	NA	28135718	28098973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103458_28123038_28123263_28135562
ES.30415.41	chr7	-	4825	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-71	-3	intron_retention	FALSE	canonical	3	429	junction_10	36.6927785810778	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAACAAAAAAAACAAA	6529	False	NA	-38	True	NA	NA	NA	28135723	28098976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.43	chr7	-	4750	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-845	-701	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	5755	False	NA	NA	False	NA	NA	NA	28136497	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.44	chr7	-	3805	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-142	728	-106	-701	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	6494	False	NA	NA	False	NA	NA	NA	28135758	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.45	chr7	-	3969	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-100	-701	intron_retention	FALSE	canonical	1	1	junction_11	148.27682397774	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	6500	False	NA	NA	False	NA	NA	NA	28135752	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135598
ES.30415.46	chr7	-	3428	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-60	-701	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	141.157122857238	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	6540	False	NA	NA	False	NA	NA	NA	28135712	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28100712_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.47	chr7	-	3695	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-82	-701	intron_retention	FALSE	canonical	1	1	junction_11	142.227126651548	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	6518	False	NA	NA	False	NA	NA	NA	28135734	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28122931_28123222_28123263_28135562
ES.30415.49	chr7	-	3428	11	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-73	-701	intron_retention	FALSE	canonical	0	0	junction_10	153.600813799927	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCCTGCACTATCAGC	6527	False	NA	NA	False	NA	NA	NA	28135725	28099674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113620_28135562
ES.30415.5	chr7	-	5504	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-858	13	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTCTTATGATGCAT	5742	False	NA	5	True	NA	NA	NA	28136510	28098933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.50	chr7	-	3563	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-64	-705	intron_retention	FALSE	canonical	1	4	junction_10	152.423128166299	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6536	False	NA	NA	False	NA	NA	NA	28135716	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28135562
ES.30415.51	chr7	-	4316	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-86	-705	intron_retention	FALSE	canonical	3	429	junction_10	38.9517650434483	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6514	False	NA	NA	False	NA	NA	NA	28135738	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.52	chr7	-	4565	9	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-85	-705	intron_retention	FALSE	canonical	2	6	junction_1	160.464949443796	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6515	False	NA	NA	False	NA	NA	NA	28135737	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103288_28103488_28104913_28105465_28105793_28106113_28106655_28106743_28106893_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.53	chr7	-	3725	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	-705	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	156.845908103746	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6534	False	NA	NA	False	NA	NA	NA	28135718	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135598
ES.30415.54	chr7	-	3810	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	-705	intron_retention	FALSE	canonical	2	13	junction_8	144.112559314121	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6526	False	NA	NA	False	NA	NA	NA	28135726	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.57	chr7	-	3893	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-116	-705	intron_retention	FALSE	canonical	2	6	junction_1	148.911248735614	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6484	False	NA	NA	False	NA	NA	NA	28135768	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.58	chr7	-	3360	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-67	-705	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	160.107556823737	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6533	False	NA	NA	False	NA	NA	NA	28135719	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28135562
ES.30415.59	chr7	-	3499	14	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-96	-705	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	150.722049132416	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6504	False	NA	NA	False	NA	NA	NA	28135748	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28122931_28123222_28123263_28135562
ES.30415.6	chr7	-	4178	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-72	10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	141.157122857238	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTTTTCTTATGATG	6528	False	NA	2	True	NA	NA	NA	28135724	28098936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28100712_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.60	chr7	-	3691	14	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-73	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	150.945814957734	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6527	False	NA	NA	False	NA	NA	NA	28135725	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107449_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.61	chr7	-	3407	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	-705	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	153.757633053524	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTCCCTGCACTAT	6526	False	NA	NA	False	NA	NA	NA	28135726	28099678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28123222_28123263_28135562
ES.30415.62	chr7	-	8130	7	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-83	-706	intron_retention	FALSE	canonical	3	429	junction_6	36.6897654515382	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCCTTCCCTGCACTA	6517	False	NA	NA	False	NA	NA	NA	28135735	28099679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28105465_28105793_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.63	chr7	-	6768	7	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-73	-706	intron_retention	FALSE	canonical	3	429	junction_6	41.9483809778955	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCCTTCCCTGCACTA	6527	False	NA	NA	False	NA	NA	NA	28135725	28099679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.64	chr7	-	3880	11	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-67	-706	intron_retention	FALSE	non_canonical	0	0	junction_7	154.923239057283	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCCTTCCCTGCACTA	6533	False	NA	NA	False	NA	NA	NA	28135719	28099679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28107337_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.65	chr7	-	3223	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	-713	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.967791481553	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6534	False	NA	NA	False	NA	NA	NA	28135718	28099686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28100712_28101248_28101333_28103044_28103169_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.66	chr7	-	6734	1	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-2964	-713	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	757	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	8935	False	NA	NA	False	NA	NA	NA	28106420	28099686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28099700_28106400
ES.30415.67	chr7	-	3899	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-83	-713	intron_retention	FALSE	canonical	0	0	junction_9	142.494712377532	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6517	False	NA	NA	False	NA	NA	NA	28135735	28099686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107449_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.68	chr7	-	4313	11	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	-713	intron_retention	FALSE	canonical	3	429	junction_10	37.9320445006593	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6526	False	NA	NA	False	NA	NA	NA	28135726	28099686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.69	chr7	-	5179	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-66	-713	intron_retention	FALSE	canonical	3	219	junction_1	88.7092008421313	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6534	False	NA	NA	False	NA	NA	NA	28135718	28099686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.7	chr7	-	4554	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-78	8	intron_retention	FALSE	canonical	2	13	junction_8	144.112559314121	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCATTTTTCTTATGA	6522	False	NA	0	True	NA	NA	NA	28135730	28098938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107525_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.71	chr7	-	5820	9	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-73	-751	intron_retention	FALSE	canonical	3	429	junction_8	41.1610783993811	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACCAAAAAAA	6527	False	NA	NA	False	ATTAAA	-17	NA	28135725	28099724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.72	chr7	-	3737	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-64	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.880307728976	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACCAAAAAAA	6536	False	NA	NA	False	ATTAAA	-17	NA	28135716	28099724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105057_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.73	chr7	-	3541	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-74	-753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.7842837245	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAACAAAACCAAAAA	6526	False	NA	NA	False	ATTAAA	-15	NA	28135726	28099726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105973_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.74	chr7	-	4006	12	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-858	-801	intron_retention	FALSE	canonical	1	1	junction_11	148.27682397774	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGCTGGTAACCATTG	5742	False	NA	NA	False	NA	NA	NA	28136510	28099774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28136219
ES.30415.75	chr7	-	3878	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-75	-803	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGGCTGGTAACCAT	6525	False	NA	NA	False	NA	NA	NA	28135727	28099776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.76	chr7	-	3714	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-153	830	-117	-803	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGGCTGGTAACCAT	6483	False	NA	NA	False	NA	NA	NA	28135769	28099776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.77	chr7	-	3248	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-82	308	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTTTCTCTGATCATTC	6518	False	NA	NA	False	NA	NA	NA	28135734	28100413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.78	chr7	-	2544	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-93	1940	-57	-1	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCTTAACTTTTGTTTA	6543	False	NA	NA	False	NA	NA	NA	28135709	28100886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ES.30415.79	chr7	-	5450	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-68	7992	-68	-2155	5prime_fragment	FALSE	canonical	3	429	junction_2	55	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGCAAATAAGAAC	6532	False	NA	NA	False	NA	NA	NA	28135720	28108877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28113768_28122860_28123263_28135562
ES.30415.8	chr7	-	3953	13	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-76	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	154.223030237236	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6524	False	NA	-1	True	NA	NA	NA	28135728	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113477_28123126_28123263_28135562
ES.30415.80	chr7	-	1709	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-116	11781	-116	-5944	5prime_fragment	FALSE	canonical	3	429	junction_2	55	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGAATTTCTAGTTT	6484	False	NA	NA	False	AATAAA	-19	NA	28135768	28112666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28113768_28122860_28123263_28135562
ES.30415.81	chr7	-	1225	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-82	12231	-82	-6394	5prime_fragment	FALSE	canonical	3	429	junction_2	55	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTTGAGTGAATTTGT	6518	False	NA	NA	False	NA	NA	NA	28135734	28113116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28113768_28122860_28123263_28135562
ES.30415.82	chr7	-	1099	3	ISM	ENSMUSG00000109336.2	ENSMUST00000207766.2	2336	13	-74	12349	-74	-6512	5prime_fragment	FALSE	canonical	3	429	junction_2	55	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGGCAAGTCCCA	6526	False	NA	NA	False	AATAAA	-20	NA	28135726	28113234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28113768_28122860_28123263_28135562
ES.30415.9	chr7	-	2635	3	NNC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-62	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.5	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCATTTTTCTTATG	6538	False	NA	-1	True	NA	NA	NA	28135714	28098939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28101221_28123060_28123263_28135562
ES.30416.1	chr7	+	1010	8	NNC	ENSMUSG00000060791.16	novel	657	7	NA	NA	-275	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	179.507603158854	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACGACATGGTATCTGC	1540	False	NA	NA	False	AATAAA	-21	NA	28136596	28145966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28143431_28143515_28144277_28144361_28145341_28145416_28145796
ES.30416.10	chr7	+	3383	5	Fusion	ENSMUSG00000030600.16_ENSMUSG00000060791.16	novel	3060	2	NA	NA	3589	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	28.7347785792757	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGTGTGTGAGTGTGT	1917	False	NA	25	True	ATTAAA	-29	NA	28146120	28167664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28146328_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.11	chr7	+	3296	5	NNC	ENSMUSG00000030600.16	novel	3060	2	NA	NA	-3595	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	26.5706605111728	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTGTGAGTGTGTG	383	False	NA	26	True	ATTAAA	-30	NA	28147809	28167665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28147929_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.12	chr7	+	3697	4	NNC	ENSMUSG00000030600.16	novel	1479	2	NA	NA	-3587	-8	intron_retention	FALSE	canonical	3	5	junction_1	29.227080289044	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAATTACCTAACCCC	391	False	NA	NA	False	AATAAA	-10	NA	28147817	28161549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28147929_28153921_28153955_28157383_28157439_28158051
ES.30416.13	chr7	+	3458	5	NIC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-214	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	6.68954408012983	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGTGAGTGTGTGTT	3764	False	NA	28	True	ATTAAA	-32	NA	28151190	28167667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.14	chr7	+	3515	5	NNC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-200	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	25.4398801097804	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	3778	False	NA	27	True	ATTAAA	-31	NA	28151204	28167666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28151470_28153921_28153955_28157383_28157511_28158051_28159489_28166013
ES.30416.15	chr7	+	3304	5	NNC	ENSMUSG00000030600.16	novel	3060	2	NA	NA	-192	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0390386872016	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTGTGAGTGTGTG	3786	False	NA	26	True	ATTAAA	-30	NA	28151212	28167665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28151268_28153921_28153955_28157383_28157511_28158051_28159489_28166013
ES.30416.16	chr7	+	3426	5	NNC	ENSMUSG00000030600.16	novel	812	4	NA	NA	-192	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7347785792757	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCGGCTCTGCTGACCAG	3786	False	NA	12	True	ATTAAA	-16	NA	28151212	28167651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28151476_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.17	chr7	+	5098	4	NNC	ENSMUSG00000030600.16	novel	1479	2	NA	NA	-189	1452	intron_retention	FALSE	canonical	0	0	junction_1	31.5841028929991	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGACAGA	3789	False	NA	NA	False	NA	NA	NA	28151215	28163009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28151268_28153921_28153955_28157383_28157439_28158051
ES.30416.18	chr7	+	3747	4	FSM	ENSMUSG00000030600.16	ENSMUST00000190954.7	812	4	-98	-2837	-98	-10	multi-exon	FALSE	canonical	3	51	junction_1	7.54247233265651	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATAATTACCTAACC	3880	False	NA	NA	False	AATAAA	-8	NA	28151306	28161547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28151470_28153921_28153955_28157383_28157439_28158051
ES.30416.19	chr7	+	1972	5	FSM	ENSMUSG00000030600.16	ENSMUST00000189877.7	1852	5	-130	10	38	-10	multi-exon	TRUE	canonical	1	4	junction_4	31.2519999360041	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATAATTACCTAACC	4016	False	NA	NA	False	AATAAA	-8	NA	28151442	28161547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28151762_28153921_28153955_28157383_28157439_28158051_28159489_28161419
ES.30416.2	chr7	+	728	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	-62	-9	-62	9	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCAAAATCTGAGCCTC	1753	False	NA	NA	False	AATAAA	-35	NA	28136809	28145980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ES.30416.20	chr7	+	3475	5	NIC	ENSMUSG00000030600.16	novel	1852	5	NA	NA	60	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	26.5706605111728	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	4038	False	NA	27	True	ATTAAA	-31	NA	28151464	28167666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28151762_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.21	chr7	+	1928	2	NNC	ENSMUSG00000030600.16	novel	3060	2	NA	NA	5990	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	1203	False	NA	27	True	ATTAAA	-31	NA	28164072	28167666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28164348_28166013
ES.30416.3	chr7	+	3463	7	Fusion	ENSMUSG00000030600.16_ENSMUSG00000060791.16	novel	657	7	NA	NA	-24	-1	multi-exon	TRUE	canonical	1	2	junction_3	164.55090397807	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGTGAGTGTGTGT	1791	False	NA	27	True	ATTAAA	-31	NA	28136847	28167666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28137000_28142644_28142695_28144277_28144361_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.4	chr7	+	3788	11	Fusion	ENSMUSG00000030600.16_ENSMUSG00000060791.16	novel	657	7	NA	NA	16	-8	multi-exon	FALSE	canonical	0	0	junction_7	179.94613082809	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACCAGTGTGTGAG	1831	False	NA	20	True	ATTAAA	-24	NA	28136887	28167659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796_28145948_28153921_28153955_28157383_28157439_28158051_28159489_28166013
ES.30416.5	chr7	+	769	7	NNC	ENSMUSG00000060791.16	novel	657	7	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	160.378372052538	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATCTGCAAAATCT	1832	False	NA	NA	False	AATAAA	-28	NA	28136888	28145973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28137000_28140731_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ES.30416.6	chr7	+	538	6	FSM	ENSMUSG00000060791.16	ENSMUST00000108289.8	477	6	-16	-45	-16	2	multi-exon	FALSE	canonical	3	12	junction_1	171.128723480309	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATCTGCAAAATCT	1839	False	NA	NA	False	AATAAA	-28	NA	28136895	28145973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28137000_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ES.30416.7	chr7	+	691	8	NNC	ENSMUSG00000060791.16	novel	657	7	NA	NA	-16	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	180.620246565516	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAATCTGAGCCTCTTTG	1839	False	NA	NA	False	AATAAA	-39	NA	28136895	28145984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28142863_28142909_28144277_28144361_28145341_28145416_28145796
ES.30416.8	chr7	+	1008	6	ISM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	25	5	-15	2	intron_retention	FALSE	canonical	3	339	junction_1	49.9575820071388	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACGACATGGTATCTGC	1840	False	NA	NA	False	AATAAA	-21	NA	28136896	28145966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341
ES.30416.9	chr7	+	613	7	FSM	ENSMUSG00000060791.16	ENSMUST00000078845.13	637	7	33	-9	33	2	multi-exon	FALSE	canonical	3	32	junction_1	149.1011029097	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATCTGCAAAATCT	179	False	NA	NA	False	AATAAA	-28	NA	28140384	28145973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28140467_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ES.30417.1	chr7	-	175	1	Intergenic	novelGene_25095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28157287	28157112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28157100_28157300
ES.30418.1	chr7	-	190	1	Intergenic	novelGene_25096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAAATAAATAGAGG	NA	False	NA	NA	False	NA	NA	NA	28162794	28162604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28162600_28162800
ES.30419.1	chr7	-	210	1	Intergenic	novelGene_25097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28189313	28189103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28189100_28189300
ES.3042.1	chr10	+	1910	1	Intergenic	novelGene_2375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACATTGTGGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	69343315	69345225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69343300_69345200
ES.30420.1	chr7	+	1301	2	FSM	ENSMUSG00000099417.2	ENSMUST00000190841.2	971	2	17	-347	17	347	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTCTTTTAAAGATTT	4409	False	NA	NA	False	NA	NA	NA	28191991	28197485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28192135_28196327
ES.30420.2	chr7	+	157	1	Intergenic	novelGene_25098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATACATAATAAA	4599	False	NA	NA	False	NA	NA	NA	28192181	28192338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28192200_28192300
ES.30421.1	chr7	-	123	1	Intergenic	novelGene_25099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	28219062	28218939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28218900_28219100
ES.30422.1	chr7	-	1415	5	NIC	ENSMUSG00000047586.5	novel	1531	6	NA	NA	192	-6	intron_retention	FALSE	canonical	3	10	junction_1	1.87082869338697	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACATGTGCTCAGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	28246487	28243026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28243698_28243846_28243986_28244663_28244760_28245580_28245778_28246175
ES.30422.3	chr7	-	1517	8	NNC	ENSMUSG00000047586.5	novel	1531	6	NA	NA	-1264	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.47759088500265	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACATGTGCTCAGAGG	NA	False	NA	NA	False	AATAAA	-19	NA	28247943	28243026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28243698_28243846_28243986_28244663_28244760_28245580_28245633_28245714_28245778_28246175_28246488_28246929_28247031_28247860
ES.30423.1	chr7	+	4395	1	Antisense	novelGene_ENSMUSG00000030602.14_AS_novelGene_ENSMUSG00000098558.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGTGGGACAGGTGGA	NA	False	NA	NA	False	NA	NA	NA	28256744	28261139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_28256700_28261100
ES.30424.1	chr7	-	3016	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-1	4	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_7	209.902328844444	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGTGTGGTCTAT	4625	False	NA	1	True	ATTAAA	-25	NA	28297581	28258239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267316_28267724_28269217_28269292_28297459
ES.30424.10	chr7	-	2942	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-8486	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	213.664326560248	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	False	NA	-5	True	ATTAAA	-19	NA	28276148	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28275952
ES.30424.11	chr7	-	3035	9	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	622	junction_8	37.6245847153161	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4624	False	NA	-5	True	ATTAAA	-19	NA	28297582	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264697_28267458_28267724_28269217_28269292_28297459
ES.30424.12	chr7	-	5728	9	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-69	0	intron_retention	FALSE	canonical	3	622	junction_8	35.9806805800002	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4527	False	NA	-5	True	ATTAAA	-19	NA	28297679	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28267724_28269217_28269292_28297459
ES.30424.14	chr7	-	977	2	NNC	ENSMUSG00000030602.14	novel	2611	8	NA	NA	5179	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	False	NA	-5	True	ATTAAA	-19	NA	28262483	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259112_28262372
ES.30424.15	chr7	-	2569	9	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	229.063548769768	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4610	False	NA	-5	True	ATTAAA	-19	NA	28297596	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264642_28269211_28269292_28297459
ES.30424.16	chr7	-	2945	3	ISM	ENSMUSG00000030602.14	ENSMUST00000032823.5	2611	8	5613	1	5613	-1	intron_retention	FALSE	canonical	3	702	junction_2	4.5	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTATGTGTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	28262049	28258246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28259231_28259569_28259705_28260223
ES.30424.17	chr7	-	3027	12	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	317.887656230108	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTATGTGTGT	4656	False	NA	-6	True	ATTAAA	-18	NA	28297550	28258246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269247_28269292_28269596_28269739_28296657_28296737_28297459
ES.30424.18	chr7	-	2333	9	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	289.628398771598	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTGTGTATGTG	4580	False	NA	-9	True	ATTAAA	-15	NA	28297626	28258249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260317_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264419_28269217_28269292_28297459
ES.30424.19	chr7	-	4354	9	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	2	-5	intron_retention	FALSE	canonical	3	622	junction_8	32.752623940686	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGTGTGTGTATGT	4628	False	NA	-10	True	ATTAAA	-14	NA	28297578	28258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28269292_28297459
ES.30424.2	chr7	-	2934	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	-34	-1	-34	1	multi-exon	FALSE	canonical	3	622	junction_9	35.4843036069349	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTATGTGTGTGGTC	4562	False	NA	-2	True	ATTAAA	-22	NA	28297644	28258242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
ES.30424.20	chr7	-	2943	11	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-9905	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	253.131191282307	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGTGTGTGTATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	28277567	28258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28277507
ES.30424.21	chr7	-	3013	11	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	468	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	253.131191282307	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGTGTGTGTATGT	5163	False	NA	-10	True	ATTAAA	-14	NA	28297043	28258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28296913
ES.30424.23	chr7	-	3034	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-10373	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	216.465034384565	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGTGTGTGTATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	28278035	28258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28277742
ES.30424.25	chr7	-	2950	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-11272	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	216.465034384565	807	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGTGTGTGTATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	28278934	28258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28278725
ES.30424.26	chr7	-	2971	11	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_8	279.757770222741	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTGTGTGTGTATG	4628	False	NA	-11	True	ATTAAA	-13	NA	28297578	28258251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269247_28269292_28269596_28269739_28297459
ES.30424.28	chr7	-	2919	11	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	269.412768813952	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTGTGTGTGTGTA	4625	False	NA	-13	True	ATTAAA	-11	NA	28297581	28258253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267316_28267376_28267458_28267724_28269217_28269292_28297459
ES.30424.3	chr7	-	3105	11	NIC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_9	227.845759231986	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4532	False	NA	-3	True	ATTAAA	-21	NA	28297674	28258243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28297459
ES.30424.30	chr7	-	2769	1	Intergenic	novelGene_25100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	684	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTGATGTATACCTGT	6272	False	NA	NA	False	GATAAA	-34	NA	28288367	28285598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28285600_28288400
ES.30424.4	chr7	-	2838	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_8	210.830866622958	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4627	False	NA	-3	True	ATTAAA	-21	NA	28297579	28258243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269247_28269292_28297459
ES.30424.5	chr7	-	2786	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	213.624858682021	809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4608	False	NA	-3	True	ATTAAA	-21	NA	28297598	28258243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264596_28267458_28267724_28269217_28269292_28297459
ES.30424.7	chr7	-	3012	11	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	399	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	253.131191282307	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTATGTGTGTGG	5094	False	NA	-4	True	ATTAAA	-20	NA	28297112	28258244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28269596_28269739_28296989
ES.30424.9	chr7	-	2940	10	NNC	ENSMUSG00000030602.14	novel	2899	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	216.107483545676	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	4625	False	NA	-5	True	ATTAAA	-19	NA	28297581	28258245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264769_28267458_28267724_28269217_28269292_28297459
ES.30425.1	chr7	+	182	1	Intergenic	novelGene_25102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGAGTGCTGGCTGCTC	853	False	NA	NA	False	NA	NA	NA	28317256	28317438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28317300_28317400
ES.30426.1	chr7	+	200	1	Intergenic	novelGene_25103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAATTAATAAAA	1935	False	NA	NA	False	NA	NA	NA	28318338	28318538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28318300_28318500
ES.30427.1	chr7	+	174	1	Intergenic	novelGene_25104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTTACCTTTCT	6851	False	NA	NA	False	NA	NA	NA	28323254	28323428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28323300_28323400
ES.30428.1	chr7	-	5080	13	FSM	ENSMUSG00000037469.12	ENSMUST00000159560.3	2207	13	-224	-2649	223	2649	multi-exon	FALSE	canonical	0	0	junction_12	2.27760839478607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTGTGGTTTTGTT	8536	False	NA	NA	False	NA	NA	NA	28330217	28304051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28307431_28310410_28310549_28313643_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28314788_28314913_28315905_28316089_28316477_28316679_28328883_28329136_28329898
ES.30428.2	chr7	-	2232	14	NNC	ENSMUSG00000037469.12	novel	1978	13	NA	NA	-43	-48	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	2.40561473401721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGTCCCTGTCTTTTTCT	8218	False	NA	NA	False	NA	NA	NA	28330535	28306748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28307431_28310410_28310549_28313643_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28314788_28314913_28315905_28316089_28316477_28316679_28328883_28329136_28330268_28330396_28330494
ES.30428.3	chr7	-	1895	13	FSM	ENSMUSG00000037469.12	ENSMUST00000159560.3	2207	13	-49	361	-49	0	multi-exon	FALSE	canonical	0	0	junction_12	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACACACTTCCACTTGG	8711	False	NA	NA	False	AATAAA	-24	NA	28330042	28307061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28307431_28310410_28310549_28313643_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28314788_28314913_28315905_28316089_28316477_28316679_28328883_28329136_28329898
ES.30428.4	chr7	-	218	1	Intergenic	novelGene_25101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAGAGCAGGT	8484	False	NA	NA	False	NA	NA	NA	28308332	28308114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28308100_28308300
ES.30429.1	chr7	+	232	1	Intergenic	novelGene_25105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	28346999	28347231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28347000_28347200
ES.3043.1	chr10	+	4329	1	Genic_Genomic	ENSMUSG00000069601.15	novel	NA	NA	NA	NA	66181	2593	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGAAAAAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	69436232	69440561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_69436200_69440600
ES.30430.1	chr7	+	174	1	Intergenic	novelGene_25106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATTTATTTTAT	3177	False	NA	NA	False	NA	NA	NA	28353928	28354102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28353900_28354100
ES.30431.1	chr7	-	177	1	Intergenic	novelGene_25107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTAAAAAAAGATA	9020	False	NA	NA	False	NA	NA	NA	28366533	28366356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28366400_28366500
ES.30432.1	chr7	+	219	1	Intergenic	novelGene_25108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTTCTAAAGTGAAAGA	1362	False	NA	NA	False	NA	NA	NA	28384790	28385009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28384800_28385000
ES.30433.1	chr7	+	1497	6	NNC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-20	990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.2688633155984	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	8825	False	NA	NA	False	NA	NA	NA	28392253	28399753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28399125
ES.30433.10	chr7	+	3328	5	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	25.5673131165557	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	9146	False	NA	NA	False	AATAAA	-19	NA	28392574	28398763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28392615_28392694_28393076_28394155_28394268_28394430_28394527_28396064
ES.30433.11	chr7	+	4413	3	NIC	ENSMUSG00000037463.15	novel	2031	5	NA	NA	78	0	intron_retention	FALSE	canonical	3	57	junction_2	5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9218	False	NA	NA	False	AATAAA	-16	NA	28392646	28398760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28394268_28394430_28394527_28396064
ES.30433.12	chr7	+	1401	4	NIC	ENSMUSG00000037463.15	novel	2031	5	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	10	junction_3	24.8506650928211	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGTTTTTTTTGTTTGT	390	False	NA	NA	False	GATAAA	-15	NA	28393429	28397384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28394268_28394430_28394527_28396064_28396201_28397053
ES.30433.2	chr7	+	1960	6	NIC	ENSMUSG00000037463.15	novel	1946	6	NA	NA	-18	-4	combination_of_known_junctions	TRUE	canonical	3	31	junction_1	12.2637677734047	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAACTGGTTCATATCT	8827	False	NA	NA	False	AATAAA	-12	NA	28392255	28398756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28392398_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ES.30433.3	chr7	+	4372	5	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-11	990	intron_retention	FALSE	canonical	1	7	junction_1	22.7321358433386	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	8834	False	NA	NA	False	NA	NA	NA	28392262	28399753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28392357_28392694_28393076_28394155_28394268_28394430_28394527_28396064
ES.30433.4	chr7	+	1907	6	NIC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	21.4811545313561	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGTTCATATCTTTT	9013	False	NA	NA	False	AATAAA	-15	NA	28392441	28398759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28392528_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ES.30433.5	chr7	+	1836	6	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	21.4811545313561	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAACTGGTTCATATC	9130	False	NA	NA	False	AATAAA	-11	NA	28392558	28398755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28392578_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ES.30433.6	chr7	+	3572	3	NIC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	43	junction_1	7	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9142	False	NA	NA	False	AATAAA	-16	NA	28392570	28398760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28393076_28394155_28394527_28396064
ES.30433.7	chr7	+	3411	4	ISM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	3	-3	3	0	intron_retention	FALSE	canonical	3	43	junction_1	9.84321537348893	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	9143	False	NA	NA	False	AATAAA	-19	NA	28392571	28398763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064
ES.30433.8	chr7	+	1944	5	FSM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	4	0	4	0	multi-exon	FALSE	canonical	3	43	junction_1	9.31396800509858	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9144	False	NA	NA	False	AATAAA	-16	NA	28392572	28398760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ES.30433.9	chr7	+	1864	6	NNC	ENSMUSG00000037463.15	novel	1948	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.9643201510517	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9144	False	NA	NA	False	AATAAA	-16	NA	28392572	28398760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28392615_28392694_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ES.30434.1	chr7	+	116	1	Intergenic	novelGene_25109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	28404073	28404189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28404100_28404200
ES.30435.1	chr7	+	177	1	Intergenic	novelGene_25110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAGAAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	28405750	28405927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28405800_28405900
ES.30436.1	chr7	+	174	1	Intergenic	novelGene_25111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACTCCAACCCCGACT	NA	False	NA	NA	False	AATAAA	-18	NA	28411788	28411962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28411800_28412000
ES.30437.1	chr7	+	1677	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	-120	6	-51	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416177	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ES.30437.10	chr7	+	1749	8	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	45.8933991074169	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTTTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	28416247	28437562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28424039_28424153_28431902_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ES.30437.11	chr7	+	1734	8	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.8707184119463	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416271	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436820_28436972_28437089
ES.30437.12	chr7	+	175	1	Intergenic	novelGene_25112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTAATGTCATTT	NA	False	NA	NA	False	NA	NA	NA	28421862	28422037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28421900_28422000
ES.30437.13	chr7	+	183	1	Intergenic	novelGene_25113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28429509	28429692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28429500_28429700
ES.30437.14	chr7	+	1618	4	ISM	ENSMUSG00000030598.16	ENSMUST00000167118.2	861	5	455	-656	455	0	3prime_fragment	FALSE	canonical	3	89	junction_3	25.4689353265241	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28432379	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28432966_28434701_28434798_28435492_28435629_28436763
ES.30437.15	chr7	+	899	5	NNC	ENSMUSG00000030598.16	novel	1958	7	NA	NA	539	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.7868417743718	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTTTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	28432463	28437561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28432547_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ES.30437.16	chr7	+	1379	5	ISM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	16244	0	576	0	3prime_fragment	FALSE	canonical	3	49	junction_4	39.6169155790806	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28432500	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ES.30437.17	chr7	+	954	4	ISM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	16420	6	793	0	3prime_fragment	FALSE	canonical	3	40	junction_3	48.5615302705982	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28432717	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28432966_28434701_28434798_28435492_28435629_28437089
ES.30437.18	chr7	+	1191	4	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	2503	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	54.9969696134857	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28434427	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28434798_28435492_28435629_28436763_28436972_28437086
ES.30437.19	chr7	+	1038	2	ISM	ENSMUSG00000030598.16	ENSMUST00000167118.2	861	5	3466	-656	3466	0	3prime_fragment	FALSE	canonical	3	89	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28435390	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28435629_28436763
ES.30437.2	chr7	+	1882	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	-76	0	-48	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416180	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ES.30437.3	chr7	+	3130	6	ISM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-37	0	-37	0	intron_retention	FALSE	canonical	3	102	junction_3	18.2909813842779	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416191	28437569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492
ES.30437.4	chr7	+	3006	7	NIC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	-37	0	intron_retention	FALSE	canonical	3	49	junction_6	34.562343027572	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416191	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28436972_28437089
ES.30437.5	chr7	+	2817	6	NNC	ENSMUSG00000030598.16	novel	1958	7	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_2	64.1011700361234	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416207	28437569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28424039_28424153_28432853_28432966_28433157_28433321_28434701_28434798_28435492
ES.30437.6	chr7	+	2353	7	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_5	56.0198377561219	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416208	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28424039_28424153_28431837_28432966_28434701_28434798_28435492_28435629_28436820_28436972_28437089
ES.30437.7	chr7	+	2098	8	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_1	59.31135418024	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416216	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28420646_28420781_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ES.30437.8	chr7	+	1958	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	-6	6	-6	0	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416222	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ES.30437.9	chr7	+	1886	7	NNC	ENSMUSG00000030598.16	novel	1806	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_2	45.6690996918777	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416229	28437563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28416464_28424039_28424153_28431902_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ES.30438.1	chr7	+	1941	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-80	7	-70	-7	multi-exon	TRUE	canonical	3	180	junction_5	21.0516824347446	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATGAGCACAGGAAGTG	198	False	NA	18	True	AATAAA	-26	NA	28441346	28453289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.10	chr7	+	1809	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	-22	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	60.5571495972766	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTCTTCTGGATCCA	267	False	NA	3	True	AATAAA	-11	NA	28441415	28453274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.11	chr7	+	1908	17	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	36322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	57.3377806838563	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCATAGCTGTGGGCCT	267	False	NA	NA	False	NA	NA	NA	28441415	28489618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855_28453281_28489573
ES.30438.12	chr7	+	3369	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	1209	intron_retention	FALSE	canonical	3	180	junction_5	20.6265382852444	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAAAACTTTCTTTAAA	267	False	NA	NA	False	NA	NA	NA	28441415	28454505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.13	chr7	+	2019	17	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	-18	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	74.905122279788	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTCTGGATCCATGAG	268	False	NA	7	True	AATAAA	-15	NA	28441416	28453278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28443985_28444145_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.15	chr7	+	3136	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	2	1183	intron_retention	FALSE	canonical	3	180	junction_4	21.753371777117	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAACTTAAAAA	270	False	NA	NA	False	NA	NA	NA	28441418	28454479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.16	chr7	+	3808	14	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	3	1183	intron_retention	FALSE	canonical	2	11	junction_6	60.1815792847538	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAACTTAAAAA	271	False	NA	NA	False	NA	NA	NA	28441419	28454479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28447363_28448379_28448428_28449005_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.18	chr7	+	1874	16	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.7321016034888	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCTGGATCCATGAGC	273	False	NA	8	True	AATAAA	-16	NA	28441421	28453279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449735_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.2	chr7	+	4999	12	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-11	-13	intron_retention	FALSE	canonical	2	11	junction_4	65.2851342981737	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATCCATGAGCACAG	257	False	NA	12	True	AATAAA	-20	NA	28441405	28453283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28446307_28446383_28447363_28448379_28448428_28449005_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.21	chr7	+	3618	8	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	4983	-15	intron_retention	FALSE	canonical	3	219	junction_2	14.4405890546369	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGGATCCATGAGCAC	1461	False	NA	10	True	AATAAA	-18	NA	28446415	28453281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.22	chr7	+	1785	15	FSM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	20	23	-12	-23	multi-exon	FALSE	canonical	3	61	junction_1	14.0365775815931	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAAGCAAC	NA	False	NA	-11	True	NA	NA	NA	28466179	28488062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.23	chr7	+	1843	16	FSM	ENSMUSG00000015149.15	ENSMUST00000072965.5	1843	16	5	-5	5	4	multi-exon	FALSE	canonical	3	18	junction_1	28.236776649532	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGGCCTCTGCTTC	NA	False	NA	17	True	ATTAAA	-26	NA	28466196	28488090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.24	chr7	+	1580	13	FSM	ENSMUSG00000015149.15	ENSMUST00000170068.9	1585	13	-28	33	21	-32	multi-exon	FALSE	canonical	2	2	junction_1	28.6162347084463	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATTAAAAAACAAAA	NA	False	NA	-20	True	NA	NA	NA	28466212	28488053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28466293_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.25	chr7	+	1869	16	NNC	ENSMUSG00000015149.15	novel	1843	16	NA	NA	-4	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.5559147624884	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATTAAAAAACAAAA	NA	False	NA	-20	True	NA	NA	NA	28466236	28488053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28466293_28471235_28471285_28471511_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28483716_28483859_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.26	chr7	+	1296	9	ISM	ENSMUSG00000015149.15	ENSMUST00000170068.9	1585	13	12104	33	1912	-32	3prime_fragment	FALSE	canonical	3	91	junction_8	7.95986023746648	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATTAAAAAACAAAA	NA	False	NA	-20	True	NA	NA	NA	28478344	28488053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.27	chr7	+	1437	7	NIC	ENSMUSG00000015149.15	novel	1585	13	NA	NA	-1845	-32	intron_retention	FALSE	canonical	3	91	junction_6	8.47381587925744	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATTAAAAAACAAAA	NA	False	NA	-20	True	NA	NA	NA	28482205	28488053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28482324_28484804_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ES.30438.28	chr7	+	2857	12	FSM	ENSMUSG00000051735.8	ENSMUST00000059857.8	2871	12	16	-2	11	2	multi-exon	FALSE	canonical	0	0	junction_1	20.4898684901539	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGTGCAGACCTGTAAT	NA	False	NA	14	True	AATAAA	-24	NA	28488409	28498390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28488431_28489750_28489837_28490015_28490176_28491661_28491765_28494246_28494320_28494402_28494468_28495082_28495230_28495315_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
ES.30438.29	chr7	+	2512	6	NNC	ENSMUSG00000051735.8	novel	748	4	NA	NA	-1567	-2	intron_retention	FALSE	canonical	0	0	junction_1	17.5225568910476	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACGAGCAATGGAGGT	NA	False	NA	1	True	AATAAA	-11	NA	28494795	28498377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28494886_28495082_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
ES.30438.3	chr7	+	3107	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	-21	-1218	-11	1218	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTCTTTAAAAAACAACAA	257	False	NA	NA	False	CATAAA	-2	NA	28441405	28454514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.30	chr7	+	2493	5	NIC	ENSMUSG00000051735.8	novel	2898	12	NA	NA	-1399	-6	intron_retention	FALSE	canonical	3	40	junction_1	3.11247489949718	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACACCAAGGTGGTAATA	NA	False	NA	2	True	NA	NA	NA	28494963	28498329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28495772_28496077_28496372_28496534_28496667_28496984_28497149_28497234
ES.30438.31	chr7	+	2194	5	NNC	ENSMUSG00000051735.8	novel	2898	12	NA	NA	-955	-3	intron_retention	TRUE	canonical	0	0	junction_3	18.1021407573801	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCAAGGTGGTAATAATA	NA	False	NA	5	True	NA	NA	NA	28495407	28498332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28495772_28496077_28496372_28496534_28496752_28496927_28497149_28497234
ES.30438.32	chr7	+	2721	2	NNC	ENSMUSG00000051735.8	novel	489	2	NA	NA	-922	2	intron_retention	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTGGTAATAATAATAAT	NA	False	NA	10	True	NA	NA	NA	28495440	28498337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28496752_28496927
ES.30438.4	chr7	+	2635	14	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	201	junction_3	17.4206569893569	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATGAGCACAGGAAGTG	258	False	NA	18	True	AATAAA	-26	NA	28441406	28453289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.5	chr7	+	3069	13	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-2	-16	intron_retention	TRUE	non_canonical	0	0	junction_5	65.5139404164403	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTGGATCCATGAGCA	266	False	NA	9	True	AATAAA	-17	NA	28441414	28453280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28445876_28446307_28446383_28447363_28448379_28448576_28448957_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.6	chr7	+	2781	15	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	1	junction_2	92.7085899637203	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATGAGCACAGGAAGTG	267	False	NA	18	True	AATAAA	-26	NA	28441415	28453289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28443985_28444145_28445876_28445907_28446165_28446307_28446383_28447363_28448379_28448428_28449005_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.7	chr7	+	1849	16	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	57.3366665697731	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCATGAGCACAGGAAG	267	False	NA	16	True	AATAAA	-24	NA	28441415	28453287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446932_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.8	chr7	+	2227	14	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	180	junction_5	21.3707758205358	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCTGGATCCATGAGC	267	False	NA	8	True	AATAAA	-16	NA	28441415	28453279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30438.9	chr7	+	2165	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	-1	5	intron_retention	FALSE	canonical	3	180	junction_5	20.6265382852444	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGTGCTGGCTGACTGC	267	False	NA	30	True	AATAAA	-38	NA	28441415	28453301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ES.30439.2	chr7	-	740	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	-18	0	-18	0	multi-exon	FALSE	canonical	3	503	junction_2	218	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTGCGGTGTCTGT	1626	False	NA	-6	True	AATAAA	-23	NA	28441263	28439066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28439665_28440911_28440980_28441189
ES.30439.3	chr7	-	759	4	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	19	0	intron_retention	FALSE	canonical	3	12	junction_2	228.231364092571	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTGCGGTGTCTGT	1663	False	NA	-6	True	AATAAA	-23	NA	28441226	28439066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28439665_28440139_28440196_28440911_28440980_28441189
ES.30439.7	chr7	-	1552	3	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	251.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTACTCAGTGTGCGG	1681	False	NA	-13	True	AATAAA	-16	NA	28441208	28439073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28439999_28440371_28440980_28441189
ES.30439.8	chr7	-	952	1	NIC	ENSMUSG00000045948.9	novel	722	3	NA	NA	-4	-931	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGTTTAGTT	1690	False	NA	NA	False	NA	NA	NA	28441199	28440247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28440200_28441200
ES.3044.1	chr10	-	178	1	Intergenic	novelGene_2376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACAAGGGG	NA	False	NA	NA	False	NA	NA	NA	69443392	69443214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69443200_69443400
ES.30440.1	chr7	-	1256	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	-14	1	-14	-1	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTTCCTGCTTATT	NA	False	NA	0	True	AATAAA	-32	NA	28465953	28458457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ES.30440.2	chr7	-	1168	6	NNC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	-9455	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	226.687979390174	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGACCCTGCCTTCCTG	NA	False	NA	-6	True	AATAAA	-26	NA	28476392	28458463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28476189
ES.30440.3	chr7	-	5989	3	NIC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	67	-11	intron_retention	FALSE	canonical	3	547	junction_2	23.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGACTGACCCTGCCTT	NA	False	NA	-10	True	AATAAA	-22	NA	28465872	28458467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28459522_28459601_28459691_28461026
ES.30440.4	chr7	-	5286	5	ISM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	57	12	57	-12	intron_retention	FALSE	canonical	3	539	junction_1	22.410934831015	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGACTGACCCTGCCT	NA	False	NA	-11	True	AATAAA	-21	NA	28465882	28458468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450
ES.30440.5	chr7	-	562	3	NNC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	40	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	269.5	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGACTGACCCTGCCT	NA	False	NA	-11	True	AATAAA	-21	NA	28465899	28458468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28458630_28459251_28459474_28465720
ES.30440.6	chr7	-	1851	4	NIC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	80	-14	intron_retention	FALSE	canonical	3	547	junction_1	20.237478982214	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCAGACTGACCCTGC	NA	False	NA	-13	True	AATAAA	-19	NA	28465859	28458470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28459691_28461026_28461361_28461450_28461557_28465668
ES.30440.7	chr7	-	3381	2	NIC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	2752	-14	intron_retention	FALSE	canonical	3	547	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCAGACTGACCCTGC	NA	False	NA	-13	True	AATAAA	-19	NA	28463187	28458470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28459691_28461026
ES.30440.8	chr7	-	1203	6	NNC	ENSMUSG00000030595.16	novel	1243	6	NA	NA	33	-18	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	230.96718381623	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGAGCCCAGACTGACC	NA	False	NA	-17	True	AATAAA	-15	NA	28465906	28458474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28458630_28459240_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ES.30441.1	chr7	+	4385	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	-39	1	intron_retention	FALSE	canonical	1	1	junction_1	2474.80956412776	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTGGGTTGTCTGCTTTC	NA	False	NA	34	True	AATAAA	-37	NA	28508191	28521692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28508285_28510096_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28515009_28516830_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.10	chr7	+	2335	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	-125	-30	-78	4	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTTGTCTGCTTTCCTC	NA	False	NA	37	True	AATAAA	-40	NA	28510236	28521695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.100	chr7	+	2428	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	153	junction_7	2151.33564940222	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAAGGGTGGGTTGTCT	NA	False	NA	28	True	AATAAA	-31	NA	28510363	28521686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.103	chr7	+	1933	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2448.85001389071	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGGGTGGGTTGTCTGC	NA	False	NA	30	True	AATAAA	-33	NA	28510363	28521688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518295_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.105	chr7	+	2201	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2485.27525650414	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510363	28521691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513715_28514524_28514621_28514704_28514778_28515009_28515117_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.112	chr7	+	2148	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	1740.53205031732	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510365	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519605_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.113	chr7	+	2127	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2111.30307781487	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510365	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516767_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.115	chr7	+	2192	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	2312.32344244471	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGGGTGGGTTGTCTGC	NA	False	NA	30	True	AATAAA	-33	NA	28510365	28521688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510588_28512703_28512823_28513278_28513517_28513626_28513711_28514522_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.118	chr7	+	4548	12	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	-753	intron_retention	FALSE	canonical	3	11	junction_6	1722.24300221475	3028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28510365	28520912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28515009_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
ES.30441.122	chr7	+	2034	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1673.448327722	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510380	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510584_28512709_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.123	chr7	+	2760	12	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	415	0	intron_retention	FALSE	canonical	3	60	junction_1	1731.09379266644	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510779	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.124	chr7	+	2668	13	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	417	-5	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	1657.64973347474	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAAGGGTGGGTTGTCT	NA	False	NA	28	True	AATAAA	-31	NA	28510781	28521686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.125	chr7	+	2073	13	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	440	0	intron_retention	FALSE	canonical	0	0	junction_1	2212.66631986288	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510804	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510886_28511547_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.126	chr7	+	2656	14	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	487	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	2429.39879820297	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510851	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.128	chr7	+	1721	11	ISM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	2961	26	473	0	3prime_fragment	FALSE	canonical	3	4757	junction_6	446.413138247521	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28513275	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.129	chr7	+	1832	10	ISM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	2914	0	473	0	3prime_fragment	FALSE	canonical	3	4757	junction_5	440.247938000373	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28513275	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.13	chr7	+	5951	11	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-11	0	intron_retention	FALSE	canonical	1	25	junction_5	1823.70484454037	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510303	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28518081_28518295_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.130	chr7	+	5150	6	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	562	0	intron_retention	FALSE	non_canonical	0	0	junction_1	2367.43160408068	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28515092	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28518743_28518948_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.131	chr7	+	3943	5	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1216	0	intron_retention	FALSE	canonical	3	4757	junction_1	503.397146892987	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28515746	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28518350_28519577_28519700_28519969_28520699_28520816_28520913_28521272
ES.30441.132	chr7	+	1993	8	NNC	ENSMUSG00000015165.17	novel	672	2	NA	NA	-1169	-2	intron_retention	FALSE	canonical	1	5	junction_1	2557.2065035974	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATAAAACTATTTGCT	NA	False	NA	5	True	AATAAA	-8	NA	28516089	28521663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28516244_28516323_28516830_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.14	chr7	+	5257	12	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	4757	junction_7	529.094939066189	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGTGGGTTGTCTGCTT	NA	False	NA	32	True	AATAAA	-35	NA	28510306	28521690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.15	chr7	+	2100	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_10	1643.62680569188	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510306	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520148_28520640_28520699_28520816_28520913_28521272
ES.30441.17	chr7	+	5367	11	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	4757	junction_6	521.6043423899	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510308	28521691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.19	chr7	+	3266	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	201	junction_6	1620.40727690774	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCAAGGGTGGGTTGTC	NA	False	NA	27	True	AATAAA	-30	NA	28510310	28521685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.2	chr7	+	1926	13	FSM	ENSMUSG00000015165.17	ENSMUST00000172529.8	1898	13	-15	-13	-13	-4	multi-exon	FALSE	canonical	3	71	junction_1	1654.75498983653	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAAGGGTGGGTTGTCTG	NA	False	NA	29	True	AATAAA	-32	NA	28508217	28521687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28508285_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.21	chr7	+	2998	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	153	junction_6	2152.18099971995	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510313	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.23	chr7	+	1724	12	ISM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	-1	779	-1	-753	5prime_fragment	FALSE	canonical	3	4757	junction_8	514.708583200081	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28510313	28520912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
ES.30441.25	chr7	+	3043	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	7	junction_6	2213.09038576276	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510314	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28514778_28515009_28515117_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.27	chr7	+	4995	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	1747.43912744686	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510316	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28517958_28518295_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.28	chr7	+	6057	11	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	4757	junction_6	549.833829443042	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGGTGGGTTGTCTGCT	NA	False	NA	31	True	AATAAA	-34	NA	28510316	28521689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.29	chr7	+	4222	12	ISM	ENSMUSG00000015165.17	ENSMUST00000172529.8	1898	13	2086	9	4	0	3prime_fragment	FALSE	canonical	3	4757	junction_7	528.730805290187	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510318	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.3	chr7	+	2003	12	NNC	ENSMUSG00000015165.17	novel	1898	13	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	2298.99201052609	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28508229	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28508285_28512703_28512823_28513278_28513517_28513626_28513714_28514524_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.31	chr7	+	1830	11	ISM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	-43	753	4	-753	5prime_fragment	FALSE	canonical	3	4757	junction_7	511.682362408555	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28510318	28520912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
ES.30441.32	chr7	+	2317	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	153	junction_7	2158.85604191716	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510320	28521691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.35	chr7	+	6410	9	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	4757	junction_5	563.60513659831	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510329	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28518350_28519577_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.40	chr7	+	5381	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	21	-3	intron_retention	FALSE	canonical	1	2	junction_1	2298.95707579842	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGGGTGGGTTGTCTGC	NA	False	NA	30	True	AATAAA	-33	NA	28510335	28521688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28511547_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.41	chr7	+	2009	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	21	112	21	-86	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGTATGTGTGATTTT	NA	False	NA	22	True	TTTAAA	-1	NA	28510335	28521579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.43	chr7	+	8232	9	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-23	0	intron_retention	FALSE	canonical	3	4757	junction_4	564.503086240456	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510338	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28512823_28513278_28513517_28513626_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.46	chr7	+	2542	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2136.02592342933	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510353	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28515009_28515475_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.48	chr7	+	6135	10	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-8	2	intron_retention	FALSE	canonical	3	4757	junction_5	540.746420568851	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGTTGTCTGCTTTCC	NA	False	NA	35	True	AATAAA	-38	NA	28510353	28521693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.5	chr7	+	2419	14	FSM	ENSMUSG00000015165.17	ENSMUST00000174548.8	2679	14	264	-4	-1	4	multi-exon	FALSE	canonical	1	1	junction_1	1609.500823053	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTTGTCTGCTTTCCTC	NA	False	NA	37	True	AATAAA	-40	NA	28508229	28521695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28508285_28510096_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.50	chr7	+	3889	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	2109.34278724034	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28515009_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.52	chr7	+	6258	10	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	4757	junction_6	574.510570017409	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28517958_28518068_28518350_28519577_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.53	chr7	+	5199	11	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1830.19294338056	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510505_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.55	chr7	+	2282	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	153	junction_7	2152.70482313659	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGTGGGTTGTCTGCTT	NA	False	NA	32	True	AATAAA	-35	NA	28510361	28521690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520913_28521272
ES.30441.56	chr7	+	5101	10	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	4757	junction_5	540.092058911039	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28512823_28513278_28513517_28513626_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.57	chr7	+	2157	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	2277.03183265894	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513715_28514524_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520148_28520640_28520699_28520816_28520913_28521272
ES.30441.58	chr7	+	4491	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	1747.43912744686	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514841_28515637_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.6	chr7	+	2459	15	NIC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2366.30288679214	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28508255	28521691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28508285_28510096_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.60	chr7	+	1683	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2532.44093858831	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510482_28513436_28513517_28513626_28513715_28514524_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520638_28520699_28520816_28520913_28521272
ES.30441.61	chr7	+	2071	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1673.448327722	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510361	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510587_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.67	chr7	+	4955	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	11	junction_6	1670.36914374904	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTGGGGCTCCAAGG	NA	False	NA	17	True	AATAAA	-20	NA	28510361	28521675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28515009_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.68	chr7	+	2086	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1667.13434063432	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGTGGGTTGTCTGCTT	NA	False	NA	32	True	AATAAA	-35	NA	28510361	28521690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518353_28519588_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.7	chr7	+	3787	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	-1648	3	-276	-3	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAAGGGTGGGTTGTCTGC	NA	False	NA	30	True	AATAAA	-33	NA	28508666	28521688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.71	chr7	+	2080	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1673.448327722	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510605_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.73	chr7	+	3326	12	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	-6	intron_retention	FALSE	canonical	3	201	junction_6	1692.12525179686	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCAAGGGTGGGTTGTC	NA	False	NA	27	True	AATAAA	-30	NA	28510361	28521685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.74	chr7	+	1746	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	-753	combination_of_known_junctions	FALSE	canonical	3	153	junction_7	2126.88819868893	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28510361	28520912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
ES.30441.76	chr7	+	4784	11	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	-753	intron_retention	FALSE	canonical	3	4757	junction_7	538.416985244708	3028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTGTGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	28510361	28520912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816
ES.30441.77	chr7	+	1927	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	90	junction_2	1593.80012993056	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513419_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.78	chr7	+	2017	14	NNC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1609.7547095294	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCAAGGGTGGGTTGTC	NA	False	NA	27	True	AATAAA	-30	NA	28510362	28521685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510442_28510512_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.79	chr7	+	2879	12	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	4757	junction_7	527.161775160228	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.8	chr7	+	1881	13	NIC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1673.18489339941	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28508930	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28508975_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.81	chr7	+	1996	12	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	67	junction_6	1728.98322004773	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.84	chr7	+	5072	12	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	25	junction_6	1740.5505541078	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518081_28518295_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.85	chr7	+	5380	10	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	4757	junction_5	537.002540399076	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510362	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.86	chr7	+	2026	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1664.1375373014	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513668_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.9	chr7	+	5005	13	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	2574.33886199717	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28508936	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28508975_28510096_28510214_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518081_28518295_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.90	chr7	+	1955	12	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1739.94100308455	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510362	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518359_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.91	chr7	+	1704	11	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1824.2677681744	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510362	28521691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517971_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.94	chr7	+	5498	9	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	4757	junction_5	560.789398972555	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510362	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28518350_28519577_28519700_28519969_28520172_28520640_28520913_28521272
ES.30441.95	chr7	+	5268	11	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1806.70789282606	3047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28510362	28521674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513712_28514523_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ES.30441.97	chr7	+	6577	10	NNC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_6	1921.00188623374	3047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510363	28521665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28518750_28518956_28520172_28520640_28520699_28520816_28520913_28521272
ES.30442.1	chr7	-	540	1	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGCCAGATTTTTGGGA	NA	False	NA	NA	False	AATAAA	-10	NA	28510616	28510076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28510100_28510600
ES.30443.1	chr7	-	3251	11	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	4.8	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCGACCGCGTGCCTAG	7172	False	NA	NA	False	NA	NA	NA	28520910	28510894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28512820_28513275_28513516_28513625_28513713_28514523_28514619_28514702_28514784_28517890_28517959_28518070_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.10	chr7	-	4379	5	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518348_28519967_28520169_28520637_28520699_28520816
ES.30443.11	chr7	-	5996	3	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28518745_28518949_28520169_28520637
ES.30443.15	chr7	-	4501	6	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.16	chr7	-	4771	5	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518347_28519574_28520169_28520637_28520699_28520816
ES.30443.17	chr7	-	4410	7	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514682_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.18	chr7	-	3494	2	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	NA	False	NA	NA	False	AAAAAG	-38	NA	28518032	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28515675_28515970
ES.30443.19	chr7	-	1462	8	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTCTTACTGCAACTT	7170	False	NA	NA	False	AAAAAG	-37	NA	28520912	28514243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28516757_28516828_28517883_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.2	chr7	-	6746	3	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	6806	False	NA	NA	False	AAAAAG	-38	NA	28521276	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518756_28518959
ES.30443.20	chr7	-	2835	3	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTCTTACTGCAACTT	NA	False	NA	NA	False	AAAAAG	-37	NA	28517985	28514243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28516442_28517264
ES.30443.21	chr7	-	4619	5	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTCTTACTGCAACT	7170	False	NA	NA	False	AAAAAG	-36	NA	28520912	28514244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518355_28519580_28519697_28519966_28520169_28520637
ES.30443.23	chr7	-	4830	4	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28518355_28519580_28520169_28520637_28520699_28520816
ES.30443.24	chr7	-	4478	6	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518352_28519580_28519697_28519966_28520174_28520637_28520699_28520816
ES.30443.25	chr7	-	5498	6	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518756_28518959_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.26	chr7	-	5886	4	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518756_28518959_28520169_28520637
ES.30443.27	chr7	-	2383	8	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28516757_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520703_28520818
ES.30443.28	chr7	-	3418	7	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-11	NA	28520912	28514269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28516828_28517883_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.3	chr7	-	4589	5	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7166	False	NA	NA	False	AAAAAG	-38	NA	28520916	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.30	chr7	-	1254	8	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-10	NA	28520912	28514270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28517883_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.31	chr7	-	3075	9	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-10	NA	28520912	28514270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28515006_28516828_28517883_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.32	chr7	-	2489	7	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	7170	False	NA	NA	False	AAAAAG	-9	NA	28520912	28514271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28516757_28518347_28519574_28519700_28519970_28520169_28520637_28520699_28520816
ES.30443.5	chr7	-	4390	7	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.6	chr7	-	4619	5	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28518347_28519574_28519697_28519966_28520169_28520637
ES.30443.7	chr7	-	1393	7	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28517883_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30443.9	chr7	-	1352	9	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTTACTGCAACTTG	7170	False	NA	NA	False	AAAAAG	-38	NA	28520912	28514242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28514619_28514702_28514776_28516757_28516828_28517883_28517957_28518067_28518347_28519574_28519697_28519966_28520169_28520637_28520699_28520816
ES.30444.1	chr7	-	147	1	Antisense	novelGene_ENSMUSG00000015165.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAACAAACCAACAGCAT	6531	False	NA	NA	False	NA	NA	NA	28521551	28521404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_28521400_28521600
ES.30445.1	chr7	+	1221	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	47	-1	47	1	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTTTACTGCAGT	NA	False	NA	15	True	AATAAA	-13	NA	28524688	28531673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ES.30445.2	chr7	+	1309	9	ISM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	93	1	-39	-1	intron_retention	FALSE	canonical	3	645	junction_5	37.6677498000611	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGGTGTCTTTACTGCA	NA	False	NA	13	True	AATAAA	-11	NA	28524734	28531671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141
ES.30445.6	chr7	+	1629	7	NIC	ENSMUSG00000053898.13	novel	1267	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	668	junction_4	29.1299769233612	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGGTGTCTTTACTGCA	NA	False	NA	13	True	AATAAA	-11	NA	28524774	28531671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529704_28530641_28530713_28530813_28531293_28531428
ES.30445.7	chr7	+	4204	20	Fusion	ENSMUSG00000053898.13_ENSMUSG00000053964.18	novel	1384	10	NA	NA	1	0	multi-exon	FALSE	canonical	1	5	junction_6	350.556557886182	154	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	28524774	28541126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530150_28530238_28530641_28530713_28530813_28530886_28531141_28531293_28531428_28533652_28533872_28533962_28535251_28535457_28537040_28537182_28539686_28539720_28539838_28539878_28540005_28540036_28540288_28540378_28540569_28540733_28540911
ES.30446.1	chr7	-	674	1	Intergenic	novelGene_25114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28533250	28532576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28532600_28533200
ES.30447.1	chr7	+	183	1	Intergenic	novelGene_25115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGGAGGGGGTG	9022	False	NA	NA	False	NA	NA	NA	28553019	28553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28553000_28553200
ES.30448.1	chr7	-	5416	2	NNC	ENSMUSG00000108930.2	novel	2902	3	NA	NA	10191	-309	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTTTTAATATACATA	NA	False	NA	NA	False	NA	NA	NA	28565565	28559320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28559987_28560815
ES.30449.1	chr7	+	176	1	Intergenic	novelGene_25116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28568858	28569034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28568900_28569000
ES.3045.1	chr10	-	186	1	Intergenic	novelGene_2377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCATTCCTAAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	69490314	69490128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69490100_69490300
ES.30450.1	chr7	+	223	1	Intergenic	novelGene_25117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAAGCTGTCTAGGGGC	NA	False	NA	NA	False	NA	NA	NA	28571396	28571619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28571400_28571600
ES.30451.1	chr7	+	3112	19	NNC	ENSMUSG00000054083.9	novel	3040	21	NA	NA	33	27	intron_retention	FALSE	canonical	0	0	junction_9	1.17720111668984	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGTTTTTAAAGTT	NA	False	NA	NA	False	AATAAA	-38	NA	28580879	28593015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586198_28586997_28587162_28587244_28587492_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
ES.30451.2	chr7	+	3032	20	NNC	ENSMUSG00000054083.9	novel	3040	21	NA	NA	34	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1.14587058195143	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGTTTTTAAAGTT	NA	False	NA	NA	False	AATAAA	-38	NA	28580880	28593015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586044_28586122_28586198_28586997_28587162_28587244_28587492_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
ES.30452.1	chr7	+	5539	7	Antisense	novelGene_ENSMUSG00000109314.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCCGCCGCTTCAGCTGC	NA	False	NA	NA	False	NA	NA	NA	28607328	28661682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_28611003_28611665_28612879_28614634_28614726_28615584_28615672_28618096_28618216_28618377_28618494_28661443
ES.30452.2	chr7	+	175	1	Intergenic	novelGene_25118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	28626679	28626854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28626700_28626900
ES.30452.3	chr7	+	120	1	Intergenic	novelGene_25119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAACA	5097	False	NA	NA	False	NA	NA	NA	28635022	28635142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28635000_28635100
ES.30452.4	chr7	+	3666	1	Intergenic	novelGene_25120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCCAGTTGGTCTCAGA	NA	False	NA	NA	False	NA	NA	NA	28653964	28657630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28654000_28657600
ES.30453.1	chr7	-	3971	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	-93	-1	-93	1	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCATCTTCTCCCT	NA	False	NA	0	True	AATAAA	-25	NA	28661858	28592671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.10	chr7	-	3860	21	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	421.467848714466	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTCATCTTCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	28661764	28592673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.100	chr7	-	3455	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	331.606133085623	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAACTTTAAAAACTT	NA	False	NA	NA	False	AAAAAG	-23	NA	28661719	28593041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612875_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.101	chr7	-	5614	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-50	35	intron_retention	FALSE	non_canonical	0	0	junction_14	372.120733096128	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAACTTTAAAAACT	NA	False	NA	NA	False	AAAAAG	-22	NA	28661698	28593042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28610306_28610382_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.102	chr7	-	3496	22	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-20	35	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	366.524796301498	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAACTTTAAAAACT	NA	False	NA	NA	False	AAAAAG	-22	NA	28661668	28593042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.103	chr7	-	2860	18	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	3990	35	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	516.950386809165	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAACTTTAAAAACT	NA	False	NA	NA	False	AAAAAG	-22	NA	28614656	28593042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637
ES.30453.104	chr7	-	3218	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-4909	34	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_20	411.634000053446	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAACTTTAAAAAC	NA	False	NA	NA	False	AAAAAG	-21	NA	28666674	28593043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28666640
ES.30453.107	chr7	-	3500	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	-3	380	-3	25	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAGAAAAC	NA	False	NA	NA	False	AAAAAG	-12	NA	28661768	28593052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.109	chr7	-	3403	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	372.120733096128	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	AAAACA	-37	NA	28661705	28593077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609405_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.113	chr7	-	4945	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	17	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	367.696451263959	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAAAAATCATT	NA	False	NA	NA	False	AAAACA	-16	NA	28661748	28593098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28610307_28610382_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.115	chr7	-	4494	12	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-513	-19	intron_retention	FALSE	canonical	3	95	junction_2	389.068542262816	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAAAAATCATT	NA	False	NA	NA	False	AAAACA	-16	NA	28607624	28593098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396
ES.30453.116	chr7	-	3045	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	49	201	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATACGCTGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	28661716	28593455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.117	chr7	-	3252	12	ISM	ENSMUSG00000054808.16	ENSMUST00000127210.8	1594	13	-116	1606	1	-1606	5prime_fragment	FALSE	canonical	3	395	junction_5	385.887749704368	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	28661764	28599650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.118	chr7	-	3207	12	ISM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	46	6571	46	-1606	5prime_fragment	FALSE	canonical	3	997	junction_4	164.137616117675	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	28661719	28599650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.119	chr7	-	3219	1	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	3935	-1612	mono-exon	FALSE	NA	NA	NA	NA	NA	1713	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTTGCTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	28602875	28599656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28599700_28602900
ES.30453.12	chr7	-	3776	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-5002	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	482.190960563322	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTCATCTTCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	28666767	28592673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28662418_28662514_28666640
ES.30453.120	chr7	-	3482	1	NIC	ENSMUSG00000054808.16	novel	1594	13	NA	NA	-2860	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	1655	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGACCGCTGCCAACCG	NA	False	NA	NA	False	NA	NA	NA	28609971	28606489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28606500_28610000
ES.30453.121	chr7	-	3282	1	Intergenic	novelGene_25121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCAAACTGGGTTGTCC	NA	False	NA	NA	False	ATTAAA	-34	NA	28661361	28658079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28658100_28661400
ES.30453.13	chr7	-	4152	21	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	35	-1	intron_retention	FALSE	canonical	3	95	junction_2	406.852184460155	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTCATCTTCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	28661730	28592673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.14	chr7	-	3810	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	331.531668924705	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTCATCTTCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	28661705	28592673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593931_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.15	chr7	-	4056	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	457.497590541714	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28661715	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610694_28610926_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.16	chr7	-	6839	19	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-58	-2	intron_retention	FALSE	canonical	3	457	junction_12	232.339762916507	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28661706	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.17	chr7	-	3676	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.644651364941	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28661729	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593516_28593678_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.18	chr7	-	3867	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	332.210817855169	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28661760	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597403_28597490_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.19	chr7	-	3736	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-4959	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	420.098854579547	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28666724	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28662418_28662518_28666640
ES.30453.2	chr7	-	9049	13	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	4901	1	intron_retention	FALSE	non_canonical	0	0	junction_11	465.691123194572	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCATCTTCTCCCT	NA	False	NA	0	True	AATAAA	-25	NA	28613745	28592671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28606490_28609327_28610307_28610382_28611747_28612802
ES.30453.20	chr7	-	5878	18	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	352.331100177445	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28661755	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597762_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.21	chr7	-	3637	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-4959	-2	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_20	411.634000053446	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTCATCTTCTC	NA	False	NA	-3	True	AATAAA	-22	NA	28666724	28592674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28666640
ES.30453.22	chr7	-	4516	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	395	junction_13	306.692687281802	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGTGTCATCTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	28661767	28592675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.26	chr7	-	4399	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	51	-3	intron_retention	FALSE	canonical	3	997	junction_12	142.35809866266	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGTGTCATCTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	28661714	28592675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.28	chr7	-	3747	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	340.139730127312	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGTGTCATCTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	28661719	28592675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.29	chr7	-	5415	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-3	combination_of_known_junctions	FALSE	canonical	3	457	junction_13	232.576095074279	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGTGTCATCTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	28661719	28592675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.3	chr7	-	3948	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-70	1	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCATCTTCTCCCT	NA	False	NA	0	True	AATAAA	-25	NA	28661835	28592671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.30	chr7	-	6079	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-3	intron_retention	FALSE	canonical	3	457	junction_13	226.230020467366	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCTGGTGTCATCTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	28661719	28592675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.32	chr7	-	3817	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	329.503941554574	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTCTGGTGTCATCTTC	NA	False	NA	-5	True	AATAAA	-20	NA	28661724	28592676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661458
ES.30453.35	chr7	-	6063	20	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	44	-6	intron_retention	FALSE	canonical	3	20	junction_3	462.647104703255	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	-7	True	AATAAA	-18	NA	28661721	28592678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.38	chr7	-	3939	22	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	478.856901352366	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	-7	True	AATAAA	-18	NA	28661767	28592678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.39	chr7	-	6038	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	8	-6	intron_retention	FALSE	non_canonical	0	0	junction_14	372.120733096128	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	-7	True	AATAAA	-18	NA	28661757	28592678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28610307_28610382_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.4	chr7	-	3815	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	500.601548139835	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661708	28592672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597403_28597490_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615670_28618096_28618217_28618378_28618494_28661443
ES.30453.40	chr7	-	3464	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.046691282768	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTCTGGTGTCATCT	NA	False	NA	-7	True	AATAAA	-18	NA	28661715	28592678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593209_28593550_28593813_28593925_28594085_28594545_28594612_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.41	chr7	-	3607	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-10323	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	417.864140600746	1814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACTCTGGTGTCATC	2621	False	NA	-8	True	AATAAA	-17	NA	28628969	28592679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28628910
ES.30453.42	chr7	-	4597	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	44	-8	intron_retention	FALSE	canonical	3	997	junction_12	142.35809866266	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661721	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.45	chr7	-	3909	22	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	46	-8	combination_of_known_splicesites	TRUE	canonical	3	7	junction_14	366.524796301498	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661719	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.46	chr7	-	3303	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-22	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	411.785845757768	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661670	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593209_28593679_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.48	chr7	-	6105	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-8	intron_retention	FALSE	non_canonical	0	0	junction_13	375.958920628305	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661719	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28610306_28610382_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.49	chr7	-	3429	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.644651364941	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661667	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593209_28593550_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.5	chr7	-	3867	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	486.583898212836	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661770	28592672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.52	chr7	-	2948	14	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	52	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	384.584798783859	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661713	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606469_28661634
ES.30453.6	chr7	-	3641	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-4961	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_20	321.180552804805	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28666726	28592672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28666640
ES.30453.60	chr7	-	3831	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	418.627671684517	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661736	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612811_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.61	chr7	-	5982	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	50	-8	intron_retention	FALSE	canonical	3	457	junction_12	238.3972568583	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661715	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.63	chr7	-	3886	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-23	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	332.123335524621	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661788	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594862_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.67	chr7	-	4120	21	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-57	-8	intron_retention	FALSE	canonical	3	95	junction_2	313.431407966719	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661705	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.68	chr7	-	3666	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	331.642409079418	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661667	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604754_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.69	chr7	-	3903	20	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	51	-8	intron_retention	FALSE	canonical	3	997	junction_12	142.393781183265	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661714	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.7	chr7	-	3932	22	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	414.86067382292	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTCATCTTCTCC	NA	False	NA	-2	True	AATAAA	-23	NA	28661755	28592673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.70	chr7	-	3885	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-26	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	329.503941554574	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661791	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618484_28661443
ES.30453.71	chr7	-	4123	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	52	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	367.696451263959	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661713	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610694_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.74	chr7	-	3089	19	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	48	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	439.700150355014	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661717	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593321_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.75	chr7	-	3517	19	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	50	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	348.077280513791	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	False	NA	-9	True	AATAAA	-16	NA	28661715	28592680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593751_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.79	chr7	-	3759	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-21	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	331.99943900555	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661669	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598057_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.81	chr7	-	3835	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	45	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	332.06985710841	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661720	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614738_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.82	chr7	-	1690	11	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	46	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	434.868543355345	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661719	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593229_28604763_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.83	chr7	-	3964	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-34	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	429.004928905186	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661799	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28605294_28605357_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.84	chr7	-	3511	20	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	36	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	332.777291535605	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661729	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604670_28610931_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.86	chr7	-	5038	19	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	1334	-9	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	389.930656228344	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28617312	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584
ES.30453.87	chr7	-	3389	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	46	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	324.644651364941	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGACTCTGGTGTCA	NA	False	NA	-10	True	AATAAA	-15	NA	28661719	28592681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593221_28593653_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.88	chr7	-	4058	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-4959	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	487.034592074886	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGGACTCTGGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	28666724	28592683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28643044_28643475_28666640
ES.30453.89	chr7	-	3857	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	420.402794947893	1816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGGACTCTGGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	28661766	28592683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618388_28618494_28661443
ES.30453.90	chr7	-	3666	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	-62	273	-62	132	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTGCCACCTCTCTCA	NA	False	NA	NA	False	TATAAA	-21	NA	28661827	28592945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.91	chr7	-	5065	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	52	58	combination_of_known_junctions	FALSE	canonical	3	457	junction_13	232.576095074279	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTCCAGAGAATTACTA	NA	False	NA	NA	False	AAAAAG	-45	NA	28661713	28593019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.92	chr7	-	3519	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-3	44	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAACTTAAGACCTT	NA	False	NA	NA	False	AAAAAG	-31	NA	28661768	28593033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.93	chr7	-	3441	21	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-57	44	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	421.467848714466	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAACTTAAGACCTT	NA	False	NA	NA	False	AAAAAG	-31	NA	28661705	28593033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594085_28594545_28594612_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.96	chr7	-	3419	21	NNC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	-34	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	420.593580550155	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAACTTTAAAAACTTA	NA	False	NA	NA	False	AAAAAG	-24	NA	28661682	28593040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597898_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.97	chr7	-	4229	20	NIC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	51	36	intron_retention	FALSE	canonical	3	997	junction_12	142.35809866266	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAACTTTAAAAACTT	NA	False	NA	NA	False	AAAAAG	-23	NA	28661714	28593041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28593813_28593925_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ES.30453.99	chr7	-	3315	22	NNC	ENSMUSG00000054808.16	novel	3530	22	NA	NA	-4909	36	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	419.81604869184	1815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAACTTTAAAAACTT	NA	False	NA	NA	False	AAAAAG	-23	NA	28666674	28593041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28662418_28662514_28666640
ES.30454.1	chr7	-	204	1	Intergenic	novelGene_25122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28667476	28667272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28667300_28667500
ES.30455.1	chr7	+	177	1	Intergenic	novelGene_25123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	28679070	28679247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28679100_28679200
ES.30456.1	chr7	+	149	1	Intergenic	novelGene_25124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28679522	28679671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28679500_28679700
ES.30457.1	chr7	-	945	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-170	-1	-120	1	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTCTCTTGCCTGTAC	NA	False	NA	-3	True	AATAAA	-18	NA	28681409	28670795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ES.30457.10	chr7	-	4400	3	NIC	ENSMUSG00000053565.11	novel	1782	6	NA	NA	1027	0	intron_retention	FALSE	canonical	3	3290	junction_1	229.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28680181	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28674095_28676625_28677416_28679868
ES.30457.11	chr7	-	954	8	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	1203.94528318274	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681295	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679743_28679968_28681098
ES.30457.12	chr7	-	875	9	NNC	ENSMUSG00000053565.11	novel	774	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1551.40218834447	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681233	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28670864_28671602_28671711_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ES.30457.13	chr7	-	657	7	FSM	ENSMUSG00000053565.11	ENSMUST00000207683.2	647	7	-11	1	7	-1	multi-exon	FALSE	canonical	3	75	junction_6	1263.25735259641	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATTGTCTCTTGCCTG	NA	False	NA	-6	True	AATAAA	-15	NA	28681223	28670798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28681098
ES.30457.14	chr7	-	1590	8	NNC	ENSMUSG00000053565.11	novel	774	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1263.75171935126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATTGTCTCTTGCCTG	NA	False	NA	-6	True	AATAAA	-15	NA	28681226	28670798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674624_28676323_28676701_28677294_28677416_28679868_28679968_28681098
ES.30457.16	chr7	-	1905	7	ISM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	-2	2	-2	-1	intron_retention	FALSE	canonical	3	2641	junction_1	389.267153336454	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATTGTCTCTTGCCTG	NA	False	NA	-6	True	AATAAA	-15	NA	28681241	28670798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868
ES.30457.2	chr7	-	1851	7	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	3290	junction_3	195.846382543961	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681223	28670796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ES.30457.5	chr7	-	718	8	NNC	ENSMUSG00000053565.11	novel	774	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1252.63624050257	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681191	28670796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28670864_28671956_28672075_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ES.30457.7	chr7	-	1423	7	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	2641	junction_1	359.585718416192	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681295	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28677416_28679868_28679968_28681098
ES.30457.8	chr7	-	750	8	NNC	ENSMUSG00000053565.11	novel	774	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_7	1156.19869770357	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681226	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681108
ES.30457.9	chr7	-	793	8	NNC	ENSMUSG00000053565.11	novel	774	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1263.75171935126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681229	28670797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676595_28676701_28677294_28677416_28679868_28679968_28681098
ES.30458.1	chr7	+	3504	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	-779	-1	-1	0	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28681473	28702704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.10	chr7	+	2697	31	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_19	32.1150881812411	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28682253	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.11	chr7	+	6177	29	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	9	-4	intron_retention	FALSE	canonical	3	103	junction_15	22.7842587981174	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAATTCTCGGAGGA	NA	False	NA	14	True	AATAAA	-19	NA	28682261	28702695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28686129_28686216_28686265_28686412_28686456_28686539_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.12	chr7	+	2649	32	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	32.0652949863218	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28682283	28702704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695558_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.13	chr7	+	2692	31	NNC	ENSMUSG00000037337.12	novel	2764	32	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	32.6518503814613	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28682290	28702704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693742_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.14	chr7	+	2672	32	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.703441538308	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28682296	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686078_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.15	chr7	+	3562	31	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	11	0	intron_retention	FALSE	canonical	3	103	junction_16	22.2441003414389	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTCGGAGGAGAGA	NA	False	NA	18	True	AATAAA	-23	NA	28682296	28702699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.18	chr7	+	2786	18	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	8108	1	intron_retention	FALSE	canonical	3	103	junction_4	24.5142427353123	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTCTCGGAGGAGAGAT	NA	False	NA	19	True	AATAAA	-24	NA	28690393	28702700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.19	chr7	+	1593	19	ISM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	8158	2	8125	0	3prime_fragment	FALSE	canonical	3	103	junction_4	25.3179778023443	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28690410	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.2	chr7	+	3652	32	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	41	0	intron_retention	FALSE	non_canonical	0	0	junction_26	32.5100480745023	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTCTCGGAGGAGAGA	NA	False	NA	18	True	AATAAA	-23	NA	28681515	28702699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699915_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.20	chr7	+	1512	17	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	8132	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	53.1074603398619	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAATTCTCGGAGGA	NA	False	NA	14	True	AATAAA	-19	NA	28690417	28702695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28690472_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.21	chr7	+	2697	15	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	8162	0	intron_retention	FALSE	canonical	1	1	junction_6	43.0870618394801	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28690447	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28690472_28690572_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.22	chr7	+	1462	14	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-7562	0	intron_retention	FALSE	canonical	3	106	junction_1	26.9773080185736	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	261	False	NA	20	True	AATAAA	-25	NA	28693404	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.23	chr7	+	354	4	NIC	ENSMUSG00000037337.12	novel	523	5	NA	NA	75	-4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	79.1973624701115	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAATTCTCGGAGGA	7037	False	NA	14	True	AATAAA	-19	NA	28701041	28702695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28701095_28701344_28701416_28701772_28701829_28702521
ES.30458.4	chr7	+	4534	28	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-126	-6	intron_retention	FALSE	canonical	3	103	junction_13	23.1180545125329	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGAAATTCTCGGAG	NA	False	NA	12	True	AATAAA	-17	NA	28682126	28702693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28682480_28682639_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.5	chr7	+	3487	31	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-121	0	intron_retention	FALSE	non_canonical	0	0	junction_4	33.0140710741479	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28682131	28702704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683574_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.6	chr7	+	2783	31	ISM	ENSMUSG00000037337.12	ENSMUST00000208227.2	2720	32	661	0	-117	0	3prime_fragment	FALSE	canonical	2	9	junction_30	30.0925239885258	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTCGGAGGAGAGATT	NA	False	NA	20	True	AATAAA	-25	NA	28682135	28702701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28702521
ES.30458.7	chr7	+	4045	29	NIC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	103	junction_16	21.7115541045005	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGAAATTCTCGGAG	NA	False	NA	12	True	AATAAA	-17	NA	28682245	28702693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701829_28702521
ES.30458.8	chr7	+	2629	33	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.0996829959036	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28682245	28702704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682311_28682413_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30458.9	chr7	+	2628	31	NNC	ENSMUSG00000037337.12	novel	2724	32	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	45.6805453363051	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAAATTCTCGGAGGA	NA	False	NA	14	True	AATAAA	-19	NA	28682247	28702695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695558_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699444_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ES.30459.1	chr7	+	472	2	NNC	ENSMUSG00000109017.2	novel	698	3	NA	NA	-4844	-188	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTTGTGTGATACCA	6750	False	NA	NA	False	AATAAA	-20	NA	28723603	28729487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28723778_28729189
ES.30459.2	chr7	+	189	1	Intergenic	novelGene_25125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAATTTGTTAAATA	NA	False	NA	NA	False	NA	NA	NA	28728594	28728783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28728600_28728800
ES.3046.1	chr10	+	175	1	Intergenic	novelGene_2378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTAATATGC	NA	False	NA	NA	False	NA	NA	NA	69620825	69621000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69620800_69621000
ES.30460.1	chr7	-	4481	33	NNC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	-5454	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	4.47988124145049	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGTGTTGGTCATTTA	9739	False	NA	NA	False	AATAAA	-21	NA	28752393	28702765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708479_28708627_28708931_28708993_28709085_28709217_28711620_28711664_28713162_28713294_28715055_28715308_28716508_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28745028_28745103_28746229_28746307_28746421_28746502_28746880_28746981_28748202_28748278_28748414_28748467_28751438_28751546_28751733_28751831_28752013_28752127_28752292
ES.30460.10	chr7	-	10687	64	NNC	ENSMUSG00000030592.19	novel	1028	7	NA	NA	9	5994	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.68343180431799	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCCGTTGTATTTTGT	NA	False	NA	NA	False	AATATA	-13	NA	28824567	28762429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28762806_28763853_28764093_28764241_28764303_28765000_28765392_28765550_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28777943_28778218_28779184_28779332_28781857_28781970_28782302_28782504_28782795_28783060_28785136_28785750_28786651_28786879_28787002_28787090_28789486_28789653_28790344_28790506_28791582_28791716_28793300_28793696_28794486_28794696_28794803_28794979_28795501_28795700_28796591_28796904_28798143_28798228_28799518_28799623_28799804_28799910_28801158_28801376_28802231_28802425_28802858_28803101_28803697_28803832_28803968_28804088_28804169_28804266_28804345_28804482_28808624_28808821_28809143_28809266_28809935_28810101_28810269_28810427_28810828_28810904_28811351_28811446_28814532_28814627_28814982_28815096_28815379_28815459_28815537_28815613_28816758_28816864_28818185_28818306_28824389
ES.30460.11	chr7	-	6139	29	ISM	ENSMUSG00000030592.19	ENSMUST00000214374.2	15300	109	14484	74480	14484	-8825	internal_fragment	FALSE	canonical	0	0	junction_13	2.1270248456183	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTGGTTCAGTGGTTAA	552	False	NA	NA	False	NA	NA	NA	28809956	28777248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28778218_28779184_28779332_28781857_28781970_28782302_28782504_28782795_28783060_28785136_28785750_28786651_28786879_28787002_28787090_28789486_28789653_28790344_28790506_28791582_28791716_28793300_28793696_28794486_28794696_28794803_28794979_28795501_28795705_28796595_28796904_28798143_28798228_28799518_28799623_28799804_28799910_28801158_28801376_28802231_28802425_28802858_28803101_28803697_28803832_28803968_28804088_28804169_28804266_28804345_28804482_28808624_28808821_28809143_28809266_28809935
ES.30460.12	chr7	-	2228	9	NNC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	-15886	-9274	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.43669858620224	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTGTTTCTGAGCTTA	NA	False	NA	NA	False	NA	NA	NA	28787388	28777697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28778218_28779184_28779332_28781857_28781970_28782302_28782504_28782795_28783060_28785136_28785750_28786651_28786879_28787002_28787090_28787331
ES.30460.13	chr7	-	2445	10	ISM	ENSMUSG00000030592.19	ENSMUST00000214374.2	15300	109	33986	74931	-18952	-9276	internal_fragment	FALSE	canonical	1	1	junction_8	2.51415744421884	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTTTCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	28790454	28777699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_28778218_28779184_28779332_28781857_28781970_28782302_28782504_28782795_28783060_28785136_28785750_28786651_28786879_28787002_28787090_28789486_28789653_28790344
ES.30460.14	chr7	-	178	1	Intergenic	novelGene_25126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGCCACACATG	9790	False	NA	NA	False	NA	NA	NA	28799280	28799102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28799100_28799300
ES.30460.2	chr7	-	3819	24	NNC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	2360	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	4.45137560777703	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTATTGTGTTGGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	28743748	28702767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708479_28708627_28708931_28708993_28709085_28709217_28711620_28711664_28713162_28713294_28715055_28715308_28716508_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28743532
ES.30460.3	chr7	-	6462	48	NNC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	4181	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	4.29492209674539	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTATTGTGTTGGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	28767321	28702768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708479_28708627_28708931_28708993_28709085_28709217_28711620_28711664_28713162_28713294_28715055_28715308_28716508_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28745028_28745103_28746229_28746307_28746421_28746502_28746880_28746981_28748202_28748278_28748414_28748467_28751438_28751546_28751733_28751831_28752013_28752127_28752486_28752625_28752955_28753016_28754313_28754485_28756348_28756442_28756559_28756648_28758893_28759135_28759226_28759560_28760932_28761064_28761567_28761650_28763853_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767229
ES.30460.4	chr7	-	759	7	NNC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	37812	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	5.14511634681104	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTATTGTGTTGGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	28708296	28702768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708257
ES.30460.6	chr7	-	3731	25	NIC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	4.21225065203337	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATTATTGTGTTGGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	28746114	28702769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708479_28708627_28708931_28708993_28709085_28709217_28711620_28711664_28713162_28713294_28715055_28715308_28716508_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28745028_28745103_28746058
ES.30460.7	chr7	-	7586	51	NIC	ENSMUSG00000030592.19	novel	15358	106	NA	NA	-4139	5744	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	2.66082693913001	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAGAAAGAAAAAAAG	5716	False	NA	NA	False	NA	NA	NA	28775641	28715779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28745028_28745103_28746229_28746307_28746421_28746502_28746880_28746981_28748202_28748278_28748414_28748467_28751438_28751546_28751733_28751831_28752013_28752127_28752486_28752625_28752955_28753016_28754313_28754485_28756348_28756442_28756559_28756648_28758893_28759135_28759226_28759560_28760932_28761064_28761567_28761650_28763853_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594
ES.30460.8	chr7	-	4379	26	NNC	ENSMUSG00000030592.19	novel	1028	7	NA	NA	-7762	5997	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.76723688902848	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTTGTATTTTGTTTT	2093	False	NA	NA	False	AATATA	-16	NA	28779264	28762426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28763069_28763120_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28779184
ES.30460.9	chr7	-	3667	27	NNC	ENSMUSG00000030592.19	novel	1028	7	NA	NA	-7772	5997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.63454519839134	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTTGTATTTTGTTTT	2083	False	NA	NA	False	AATATA	-16	NA	28779274	28762426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28762806_28763853_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28777943_28778218_28779184
ES.30461.1	chr7	+	220	1	Intergenic	novelGene_25127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGGCACAAAATT	120	False	NA	NA	False	ATTAAA	-29	NA	28832505	28832725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28832500_28832700
ES.30462.1	chr7	+	2275	17	FSM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	5	2341	5	1	multi-exon	TRUE	non_canonical	0	0	junction_1	19.1978799285234	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	193	False	NA	19	True	AAAAAG	-18	NA	28834362	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28834521_28836965_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.10	chr7	+	1927	17	NNC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2564	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.7579149960757	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGCACTGACTGCCAGT	417	False	NA	12	True	AAAAAG	-11	NA	28837061	28851038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845353_28845439_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.11	chr7	+	2771	14	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2564	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	15.6541769006828	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACTGACTGCCAGTCACA	417	False	NA	16	True	AAAAAG	-15	NA	28837061	28851042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
ES.30462.12	chr7	+	2335	16	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	2704	2027	2564	313	3prime_fragment	FALSE	non_canonical	0	0	junction_2	15.5905954558082	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGTCCTATGGTTT	417	False	NA	NA	False	AAAACA	-23	NA	28837061	28851359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.13	chr7	+	2926	16	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2564	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	20.9248390409314	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACACGGTTCATAGTGT	417	False	NA	NA	False	ACTAAA	-12	NA	28837061	28851965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842420_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.14	chr7	+	1725	9	NNC	ENSMUSG00000030589.16	novel	3712	12	NA	NA	2564	88	intron_retention	FALSE	non_canonical	0	0	junction_4	25.4358875410315	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCTGGGTAGATTGTT	417	False	NA	NA	False	AAAACA	-10	NA	28837061	28848829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28839666_28839799_28839912_28840067_28842420_28842561_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198
ES.30462.15	chr7	+	2237	14	NIC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2564	-3	intron_retention	FALSE	canonical	3	29	junction_10	8.89252062561134	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCACTGACTGCCAGTCAC	417	False	NA	15	True	AAAAAG	-14	NA	28837061	28851041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.16	chr7	+	4929	11	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2564	1	intron_retention	FALSE	canonical	3	10	junction_1	14.9883287927641	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	417	False	NA	19	True	AAAAAG	-18	NA	28837061	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28839666_28839799_28839912_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
ES.30462.17	chr7	+	2028	16	NNC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2564	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15.5905954558082	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCCAGTCACACT	417	False	NA	18	True	AAAAAG	-17	NA	28837061	28851044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838341_28838458_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.18	chr7	+	1464	8	ISM	ENSMUSG00000030589.16	ENSMUST00000162946.8	2005	13	2705	2879	2565	-2114	internal_fragment	FALSE	non_canonical	0	0	junction_2	19.7184260662613	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGAGTCGTCCCTTTAG	418	False	NA	NA	False	NA	NA	NA	28837062	28845862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232
ES.30462.19	chr7	+	2265	4	NNC	ENSMUSG00000030589.16	novel	1997	17	NA	NA	2565	17	intron_retention	FALSE	canonical	0	0	junction_3	24.8327740429189	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATGGTGGCTCAAAC	418	False	NA	NA	False	AAAAAG	-25	NA	28837062	28850420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838531_28839666_28840197_28849068
ES.30462.2	chr7	+	2055	16	NIC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2500	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	19.18286272229	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	353	False	NA	19	True	AAAAAG	-18	NA	28836997	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842420_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.20	chr7	+	3119	14	NNC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2565	347	intron_retention	FALSE	non_canonical	0	0	junction_2	20.5374531587663	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTCCTCACCACCTGT	418	False	NA	NA	False	NA	NA	NA	28837062	28851393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844558_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
ES.30462.21	chr7	+	2239	11	ISM	ENSMUSG00000030589.16	ENSMUST00000162946.8	2005	13	2733	-428	2593	428	intron_retention	FALSE	non_canonical	0	0	junction_2	17.2034880184223	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTTGCTCCCTCCTTC	446	False	NA	NA	False	AAGAAA	-21	NA	28837090	28849169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198
ES.30462.22	chr7	+	1978	10	NNC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	5473	1	intron_retention	FALSE	canonical	0	0	junction_7	22.4636881199552	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	1254	False	NA	19	True	AAAAAG	-18	NA	28839970	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28840067_28842390_28842565_28844556_28844674_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849332_28849482_28849603_28849717_28850870
ES.30462.23	chr7	+	5182	8	NNC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	7389	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	20.9079615731151	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGGAAGAAAAAAAAAAAAAA	271	False	NA	NA	False	AAAAAG	-5	NA	28841886	28850400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28843910_28843962_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603
ES.30462.24	chr7	+	3721	6	ISM	ENSMUSG00000030589.16	ENSMUST00000159351.3	1997	17	7771	-120	-7352	0	intron_retention	FALSE	canonical	3	43	junction_4	6.67532770731145	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCCAGTCACACT	653	False	NA	18	True	AAAAAG	-17	NA	28842268	28851044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198
ES.30462.25	chr7	+	1242	10	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	-5010	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	22.2965423882075	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	2995	False	NA	19	True	AAAAAG	-18	NA	28844610	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849368_28849482_28849603_28849717_28850870
ES.30462.26	chr7	+	3122	7	ISM	ENSMUSG00000030589.16	ENSMUST00000032811.12	4621	17	13650	9	-1613	-9	3prime_fragment	FALSE	canonical	3	29	junction_3	11.13552872566	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATAGCCTTATTG	6392	False	NA	NA	False	AAAACA	-5	NA	28848007	28853377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28848074_28848198_28848318_28848411_28848557_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.3	chr7	+	2545	13	NNC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2551	0	intron_retention	FALSE	canonical	0	0	junction_10	19.7350506009542	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTGCCAGTCACACT	404	False	NA	18	True	AAAAAG	-17	NA	28837048	28851044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849332_28849482_28849603_28849717_28850870
ES.30462.4	chr7	+	2731	15	NNC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2551	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	19.5521281267721	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCACTGACTGCCAGTCA	404	False	NA	14	True	AAAAAG	-13	NA	28837048	28851040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849346_28849482_28849568_28849717_28850870
ES.30462.5	chr7	+	2045	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2695	1	2555	1	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	408	False	NA	19	True	AAAAAG	-18	NA	28837052	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.6	chr7	+	3004	15	NIC	ENSMUSG00000030589.16	novel	4621	17	NA	NA	2562	313	intron_retention	FALSE	non_canonical	0	0	junction_2	15.1596941437026	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGTCCTATGGTTT	415	False	NA	NA	False	AAAACA	-23	NA	28837059	28851359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.7	chr7	+	2835	15	NNC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2562	1	intron_retention	FALSE	non_canonical	0	0	junction_2	19.7939642418633	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCCAGTCACACTC	415	False	NA	19	True	AAAAAG	-18	NA	28837059	28851045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844411_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849346_28849482_28849603_28849717_28850870
ES.30462.8	chr7	+	1758	10	NIC	ENSMUSG00000030589.16	novel	3712	12	NA	NA	2562	90	intron_retention	FALSE	non_canonical	0	0	junction_2	23.4093998214393	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGGTAGATTGTTTG	415	False	NA	NA	False	AAAACA	-12	NA	28837059	28848831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198
ES.30462.9	chr7	+	3002	15	NNC	ENSMUSG00000030589.16	novel	4617	17	NA	NA	2563	333	intron_retention	FALSE	non_canonical	0	0	junction_2	19.9756228990257	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGCTCTGCAAGATGGC	416	False	NA	NA	False	AAAACA	-43	NA	28837060	28851379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28837151_28838235_28838344_28838468_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849261_28849368_28849482_28849603_28849717_28850870
ES.30463.1	chr7	+	1265	1	FSM	ENSMUSG00000099098.5	ENSMUST00000184073.2	1241	1	-26	2	-26	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCGTGTGTGTGTATGT	NA	False	NA	NA	False	AATAAA	-21	NA	28855078	28856343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28855100_28856300
ES.30464.1	chr7	-	2077	6	NNC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	2	1	intron_retention	TRUE	canonical	2	3	junction_4	142.16328639983	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCTTGTTTCTGTTAGG	NA	False	NA	0	True	AATAAA	-22	NA	28855606	28851933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854737_28855099_28855235_28855455
ES.30464.12	chr7	-	2484	6	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	257	junction_2	26.1717404847289	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855606	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
ES.30464.13	chr7	-	1596	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	257	junction_3	25.0493956458479	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855647	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28855235_28855309_28855456_28855554
ES.30464.14	chr7	-	1183	7	NNC	ENSMUSG00000030590.16	novel	1359	7	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_2	138.115491125684	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855602	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28852273_28852746_28852915_28853847_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855455
ES.30464.15	chr7	-	2569	5	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	257	junction_2	27.2213151776324	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855616	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855456_28855554
ES.30464.16	chr7	-	1631	6	FSM	ENSMUSG00000030590.16	ENSMUST00000150431.8	1632	6	1	0	1	0	multi-exon	FALSE	canonical	3	257	junction_3	26.3210942021794	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855607	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28855456_28855554
ES.30464.17	chr7	-	1163	7	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	35	junction_2	99.9762471790175	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855648	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28852915_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ES.30464.18	chr7	-	2206	3	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	5	junction_2	147	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855597	28851936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28854119_28855099
ES.30464.19	chr7	-	2542	5	NNC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_4	131.109448553489	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGATCTTGTTTCTGT	NA	False	NA	-4	True	AATAAA	-18	NA	28855637	28851937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28855409_28855554
ES.30464.20	chr7	-	1174	7	NNC	ENSMUSG00000030590.16	novel	1359	7	NA	NA	94	-2	intron_retention	FALSE	canonical	2	3	junction_5	108.255484849499	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGGATCTTGTTTCTG	NA	False	NA	-5	True	AATAAA	-17	NA	28855491	28851938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854737_28855099_28855235_28855309
ES.30464.21	chr7	-	3206	2	NIC	ENSMUSG00000030590.16	novel	405	4	NA	NA	6	-2	intron_retention	FALSE	canonical	3	333	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGGATCTTGTTTCTG	NA	False	NA	-5	True	AATAAA	-17	NA	28855602	28851938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28854119_28854576
ES.30464.22	chr7	-	2663	4	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	-8	1	intron_retention	FALSE	canonical	3	287	junction_3	19.4821855949366	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTATAGGATCTTGTT	NA	False	NA	-9	True	AATAAA	-13	NA	28855636	28851942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28854119_28854576_28855456_28855554
ES.30464.3	chr7	-	1348	7	NIC	ENSMUSG00000030590.16	novel	1293	8	NA	NA	-12	1	intron_retention	FALSE	canonical	3	257	junction_3	24.5877114745467	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855640	28851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
ES.30464.4	chr7	-	1293	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	-1	1	-1	1	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855660	28851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ES.30464.5	chr7	-	2261	6	NIC	ENSMUSG00000030590.16	novel	2169	7	NA	NA	4	1	intron_retention	FALSE	canonical	3	257	junction_2	24.6121921006643	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855624	28851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855456_28855554
ES.30464.7	chr7	-	2220	7	FSM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	-50	-1	1	1	multi-exon	FALSE	canonical	3	257	junction_2	24.4386988196999	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855658	28851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ES.30464.8	chr7	-	1107	7	NNC	ENSMUSG00000030590.16	novel	1189	7	NA	NA	2	1	intron_retention	FALSE	canonical	1	1	junction_4	143.151046877842	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATCTTGTTTCTGTTA	NA	False	NA	-2	True	AATAAA	-20	NA	28855606	28851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28852273_28852746_28852915_28854040_28854119_28854576_28854737_28854850_28854929_28855099_28855235_28855455
ES.30465.1	chr7	-	1458	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	-3	-64	-3	64	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGTTTCTTGCTTTGAA	NA	False	NA	54	True	NA	NA	NA	28879980	28873548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ES.30465.10	chr7	-	1863	6	NIC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	6	-2	intron_retention	FALSE	canonical	3	1581	junction_4	63.7852647560548	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCCCGAGTCTCCCCA	NA	False	NA	-14	True	AATAAA	-16	NA	28879900	28873955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28874173_28874835_28874948_28875497_28876657_28878343_28878447_28878567_28878641_28879701
ES.30465.3	chr7	-	1152	5	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	807.111013120252	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGAGTGTATCCAGTCT	NA	False	NA	-11	True	AATAAA	-14	NA	28879949	28873613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876623_28879701
ES.30465.4	chr7	-	1465	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	-13	60	-13	-60	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGACTTTGTCTATGGG	NA	False	NA	0	True	ATTAAA	-22	NA	28880111	28873672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ES.30465.5	chr7	-	3375	4	NIC	ENSMUSG00000030591.18	novel	1983	6	NA	NA	-16	-66	intron_retention	FALSE	canonical	3	1581	junction_2	41.9602986961088	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGAAACTGACTTTGTC	NA	False	NA	-6	True	ATTAAA	-16	NA	28879922	28873678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28876657_28878343_28878447_28878567_28878641_28879701
ES.30465.6	chr7	-	2718	5	NIC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	-29	-73	intron_retention	FALSE	canonical	3	1581	junction_3	61.29641098792	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAGACATGAAACTGA	NA	False	NA	-13	True	ATTAAA	-9	NA	28879935	28873685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28874173_28874835_28876657_28878343_28878447_28878567_28878641_28879701
ES.30465.7	chr7	-	1070	5	NIC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	1	-73	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	804.111932506912	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAGACATGAAACTGA	NA	False	NA	-13	True	ATTAAA	-9	NA	28879905	28873685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28879701
ES.30465.8	chr7	-	896	5	NNC	ENSMUSG00000030591.18	novel	1391	7	NA	NA	15	71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	807.111013120252	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTTGTCATTGCTCTG	NA	False	NA	59	True	GATAAA	-35	NA	28879962	28873882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876623_28879701
ES.30465.9	chr7	-	1239	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	-6	279	-6	62	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCGTTTCCCAGTTGTC	NA	False	NA	50	True	GATAAA	-26	NA	28880104	28873891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ES.30466.1	chr7	+	203	1	Intergenic	novelGene_25128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	28894151	28894354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28894200_28894400
ES.30466.11	chr7	+	1209	7	NIC	ENSMUSG00000030588.13	novel	1111	8	NA	NA	9	-1	intron_retention	FALSE	canonical	3	488	junction_1	385.732924299818	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCCTCCACTTCTGAC	6070	False	NA	11	True	AATAAA	-14	NA	28937786	28946953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.12	chr7	+	1178	7	NIC	ENSMUSG00000030588.13	novel	1111	8	NA	NA	11	-1	intron_retention	FALSE	canonical	3	488	junction_1	392.940199012521	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCCTCCACTTCTGAC	6072	False	NA	11	True	AATAAA	-14	NA	28937788	28946953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945420_28946661
ES.30466.13	chr7	+	1170	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	755	junction_1	295.044488170852	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6072	False	NA	12	True	AATAAA	-15	NA	28937788	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945420_28946661
ES.30466.14	chr7	+	1083	8	NNC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	560.601171484138	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6073	False	NA	12	True	AATAAA	-15	NA	28937789	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945413_28946661
ES.30466.15	chr7	+	1115	7	NNC	ENSMUSG00000030588.13	novel	1111	8	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_3	602.651755899615	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCAGCCTCCACTTCTGA	6076	False	NA	10	True	AATAAA	-13	NA	28937792	28946952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937871_28943494_28943728_28943823_28944029_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.16	chr7	+	928	7	NNC	ENSMUSG00000030588.13	novel	1111	8	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	700.824197324518	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCCTCCACTTCTGAC	6083	False	NA	11	True	AATAAA	-14	NA	28937799	28946953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937871_28943494_28943724_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ES.30466.17	chr7	+	1186	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	-16	-24	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	515.665569523346	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGGCTGCAAGTTTAA	6144	False	NA	0	True	NA	NA	NA	28937860	28946994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.18	chr7	+	1147	8	NNC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	672.052597552864	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6168	False	NA	12	True	AATAAA	-15	NA	28937884	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944124_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.19	chr7	+	1167	8	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	-7	3	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	482.335940174142	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCACTTCTGACCGGC	6174	False	NA	15	True	AATAAA	-18	NA	28937890	28946957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.2	chr7	+	174	2	Antisense	novelGene_ENSMUSG00000030587.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTTGAGGGTTGGC	NA	False	NA	NA	False	NA	NA	NA	28894154	28955210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_28894312_28955193
ES.30466.20	chr7	+	942	7	NIC	ENSMUSG00000030588.13	novel	1086	7	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	708.932237006237	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6192	False	NA	12	True	AATAAA	-15	NA	28937908	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ES.30466.21	chr7	+	1374	5	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	13	0	intron_retention	FALSE	canonical	3	54	junction_1	625.489608227027	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6194	False	NA	12	True	AATAAA	-15	NA	28937910	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937989_28943494_28943728_28943823_28944265_28945090_28945420_28946661
ES.30466.22	chr7	+	1121	8	FSM	ENSMUSG00000030588.13	ENSMUST00000142519.3	1153	8	-37	69	17	-1	multi-exon	FALSE	canonical	3	11	junction_1	530.605237787328	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCCTCCACTTCTGAC	6198	False	NA	11	True	AATAAA	-14	NA	28937914	28946953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28938019_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.23	chr7	+	984	7	FSM	ENSMUSG00000030588.13	ENSMUST00000108237.2	1086	7	38	64	17	0	multi-exon	FALSE	canonical	3	48	junction_5	686.982471877316	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6198	False	NA	12	True	AATAAA	-15	NA	28937914	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
ES.30466.24	chr7	+	1185	7	NIC	ENSMUSG00000030588.13	novel	1153	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	150	junction_1	517.748866622505	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6232	False	NA	12	True	AATAAA	-15	NA	28937948	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28938037_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945420_28946661
ES.30466.3	chr7	+	1243	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	-91	-41	-67	-23	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGCTGCAAGTTTAAT	5970	False	NA	1	True	NA	NA	NA	28937686	28946995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.4	chr7	+	1190	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	-22	-42	-22	-22	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCTGCAAGTTTAATA	6015	False	NA	2	True	NA	NA	NA	28937731	28946996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.5	chr7	+	1322	6	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	755	junction_1	295.529084863064	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6040	False	NA	12	True	AATAAA	-15	NA	28937756	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937862_28943494_28943728_28943823_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.6	chr7	+	1089	8	NNC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	534.080441850614	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCCTCCACTTCTGAC	6040	False	NA	11	True	AATAAA	-14	NA	28937756	28946953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937829_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.7	chr7	+	1211	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	755	junction_1	285.93574453013	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6048	False	NA	12	True	AATAAA	-15	NA	28937764	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937862_28943494_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ES.30466.8	chr7	+	1073	8	NNC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	560.447452433121	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6050	False	NA	12	True	AATAAA	-15	NA	28937766	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945365_28945420_28946661
ES.30466.9	chr7	+	1316	6	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	755	junction_1	300.629739047886	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6051	False	NA	12	True	AATAAA	-15	NA	28937767	28946954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_28937862_28943494_28943929_28944019_28944265_28945090_28945247_28945325_28945420_28946661
ES.30467.1	chr7	-	5924	18	NNC	ENSMUSG00000049676.15	novel	3670	29	NA	NA	-177	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	1.74498787931663	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCGAGTCCTCAGAAAGG	NA	False	NA	NA	False	AATAAA	-18	NA	28910297	28880957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28881352_28881457_28881558_28881661_28881755_28884388_28884516_28884612_28884677_28884861_28885019_28889234_28889292_28889371_28889453_28894638_28894749_28895252_28895365_28896581_28896690_28897537_28897646_28897773_28897834_28899541_28899680_28901688_28901861_28904191_28904348_28906229_28908999_28909179
ES.30467.2	chr7	-	5593	7	NIC	ENSMUSG00000049676.15	novel	2495	21	NA	NA	-132	0	intron_retention	FALSE	canonical	0	0	junction_4	2.14087209644419	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCGAGTCCTCAGAAAG	8358	False	NA	NA	False	AATAAA	-17	NA	28889757	28880958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28881352_28881457_28881558_28881661_28881755_28884388_28884516_28884612_28889292_28889371_28889453_28889637
ES.30467.3	chr7	-	3509	27	NNC	ENSMUSG00000049676.15	novel	3670	29	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.34236768901309	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCGAGTCCTCAGAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	28910542	28880958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28881352_28881457_28881558_28881661_28881755_28884419_28884516_28884612_28884677_28884861_28885019_28889234_28889292_28889371_28889453_28889637_28889757_28889969_28890061_28890151_28890215_28890959_28891174_28894638_28894749_28894837_28894997_28895252_28895365_28896399_28896530_28896638_28896690_28897537_28897646_28897773_28897834_28899541_28899680_28901688_28901861_28904191_28904348_28905753_28905827_28906068_28906106_28906229_28906375_28909904_28909959_28910066
ES.30467.4	chr7	-	4398	6	NIC	ENSMUSG00000049676.15	novel	3578	27	NA	NA	-334	0	intron_retention	FALSE	canonical	0	0	junction_3	2.33238075793812	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCGAGTCCTCAGAAAG	8156	False	NA	NA	False	AATAAA	-17	NA	28889959	28880958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28881352_28881457_28881558_28881661_28884516_28884612_28885019_28889234_28889292_28889371
ES.30467.5	chr7	-	4093	21	NNC	ENSMUSG00000049676.15	novel	3670	29	NA	NA	-69	0	intron_retention	FALSE	canonical	0	0	junction_4	2.3895606290697	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCGAGTCCTCAGAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	28910578	28880958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28881352_28881457_28881558_28881661_28881755_28884103_28884516_28884612_28884677_28884861_28885019_28889220_28889292_28889371_28890038_28890151_28890215_28890959_28891174_28894638_28894749_28894837_28894997_28895252_28895365_28896399_28896690_28897537_28897646_28897773_28897834_28899541_28899680_28901688_28901861_28906229_28906375_28909904_28909959_28910066
ES.30467.6	chr7	-	3702	18	NNC	ENSMUSG00000049676.15	novel	2957	23	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_3	2.53146291662941	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTACGTGTCTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	28910909	28889122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28889292_28889371_28889453_28889637_28889757_28889861_28890061_28890151_28890215_28890959_28891174_28894638_28894749_28894837_28894997_28895252_28896690_28897537_28897646_28897773_28897834_28899541_28899680_28901688_28901861_28904191_28904348_28906229_28906375_28909904_28909959_28910066_28910351_28910875
ES.30468.1	chr7	-	4186	3	FSM	ENSMUSG00000046410.11	ENSMUST00000085818.6	4084	3	-98	-4	-98	4	multi-exon	FALSE	canonical	1	1	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGTGTTTTCGTACTC	NA	False	NA	NA	False	NA	NA	NA	28932038	28921346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28924685_28924896_28925293_28931586
ES.30469.1	chr7	-	228	1	Intergenic	novelGene_25129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	28937111	28936883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28936900_28937100
ES.3047.1	chr10	-	179	1	Intergenic	novelGene_2379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69626150	69625971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69626000_69626200
ES.30470.1	chr7	-	436	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	69	961	-59	50	multi-exon	FALSE	canonical	3	53	junction_3	7.36357401145817	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGTTTATTGTTGCGGG	1852	False	NA	-8	True	NA	NA	NA	28947822	28946946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
ES.30471.1	chr7	-	1836	1	Intergenic	novelGene_25130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCAGTGCTTGTGCACC	9889	False	NA	NA	False	NA	NA	NA	28951598	28949762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28949800_28951600
ES.30471.2	chr7	-	1258	2	Intergenic	novelGene_25131	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCAGTGCTTGTGCACC	9889	False	NA	NA	False	NA	NA	NA	28951598	28949762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28949818_28950395
ES.30472.1	chr7	+	3650	1	Intergenic	novelGene_25133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1320	False	NA	NA	False	NA	NA	NA	28973939	28977589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28973900_28977600
ES.30472.2	chr7	+	3624	1	Intergenic	novelGene_25134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATTTTATGTCTCAGG	1543	False	NA	NA	False	AATAAA	-28	NA	28974162	28977786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28974200_28977800
ES.30473.1	chr7	-	1387	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	-157	-19	-155	1	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTTTTTGGTT	312	False	NA	3	True	AATAAA	-40	NA	28981492	28955746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ES.30473.10	chr7	-	1037	7	FSM	ENSMUSG00000074227.13	ENSMUST00000207601.2	1304	7	240	27	238	-9	multi-exon	FALSE	canonical	0	0	junction_2	472.77185007382	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	707	False	NA	-25	True	AATAAA	-12	NA	28981097	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
ES.30473.11	chr7	-	872	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	-140	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	474.356996364552	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	327	False	NA	-25	True	AATAAA	-12	NA	28981477	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28981408
ES.30473.12	chr7	-	1369	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	6	9	4	-9	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	473	False	NA	-25	True	AATAAA	-12	NA	28981331	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
ES.30473.13	chr7	-	2701	6	NNC	ENSMUSG00000074227.13	novel	1304	7	NA	NA	257	-9	intron_retention	FALSE	canonical	0	0	junction_1	392.436695531904	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	726	False	NA	-25	True	AATAAA	-12	NA	28981078	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28957632_28957851_28958014_28958470_28958878_28959481_28959555_28959795_28959856_28980936
ES.30473.14	chr7	-	2139	5	NIC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-17	-9	intron_retention	FALSE	canonical	0	0	junction_2	428.359880824524	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	450	False	NA	-25	True	AATAAA	-12	NA	28981354	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28959856_28980936
ES.30473.15	chr7	-	2659	5	NIC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-125	-9	intron_retention	FALSE	canonical	0	0	junction_1	445.694612374886	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	342	False	NA	-25	True	AATAAA	-12	NA	28981462	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ES.30473.16	chr7	-	2785	6	NIC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-80	-9	intron_retention	FALSE	canonical	0	0	junction_1	480.764391360259	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	387	False	NA	-25	True	AATAAA	-12	NA	28981417	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
ES.30473.17	chr7	-	3197	5	NNC	ENSMUSG00000074227.13	novel	1304	7	NA	NA	-17	-9	intron_retention	FALSE	canonical	0	0	junction_1	422.165474073852	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	450	False	NA	-25	True	AATAAA	-12	NA	28981354	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28958014_28958470_28958878_28959481_28959555_28959795_28959856_28980936
ES.30473.18	chr7	-	1105	5	NNC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-25	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	445.694612374886	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	442	False	NA	-25	True	AATAAA	-12	NA	28981362	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28956178_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ES.30473.19	chr7	-	1249	7	NNC	ENSMUSG00000074227.13	novel	1304	7	NA	NA	-57	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	479.12234577634	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	410	False	NA	-25	True	AATAAA	-12	NA	28981394	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
ES.30473.2	chr7	-	2377	6	NIC	ENSMUSG00000074227.13	novel	1304	7	NA	NA	247	-8	intron_retention	FALSE	canonical	0	0	junction_1	501.147882366074	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGTTTTTTGTTTTTG	716	False	NA	-6	True	AATAAA	-31	NA	28981088	28955755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
ES.30473.21	chr7	-	1333	1	Intergenic	novelGene_25132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGCAAGACAGTGAGTC	NA	False	NA	NA	False	NA	NA	NA	28967457	28966124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28966100_28967500
ES.30473.22	chr7	-	228	1	Intergenic	novelGene_25135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGTGAATTAAAATAC	6785	False	NA	NA	False	AAAAAG	-15	NA	28975019	28974791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28974800_28975000
ES.30473.3	chr7	-	1188	6	NNC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	-54	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.498931840141	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTAGTTTGGTTTTTTGTT	413	False	NA	-10	True	AATAAA	-27	NA	28981391	28955759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ES.30473.4	chr7	-	3996	3	NIC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	273	0	intron_retention	FALSE	canonical	0	0	junction_1	499	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	742	False	NA	-16	True	AATAAA	-21	NA	28981062	28955765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28959856_28980936
ES.30473.5	chr7	-	3188	4	NIC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	271	0	intron_retention	FALSE	canonical	0	0	junction_1	493.843654971445	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	740	False	NA	-16	True	AATAAA	-21	NA	28981064	28955765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28958014_28958823_28959856_28980936
ES.30473.6	chr7	-	3358	5	NIC	ENSMUSG00000074227.13	novel	1384	7	NA	NA	269	-3	intron_retention	FALSE	canonical	0	0	junction_1	447.370302434124	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTACTATGTAGTTTGG	738	False	NA	-19	True	AATAAA	-18	NA	28981066	28955768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_28957632_28957851_28958014_28958823_28959856_28963019_28963191_28980936
ES.30473.8	chr7	-	994	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	275	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	474.833191763171	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACTTACTATGTA	744	False	NA	-25	True	AATAAA	-12	NA	28981060	28955774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980869
ES.30474.1	chr7	+	153	1	Intergenic	novelGene_25136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATCAAAAA	9994	False	NA	NA	False	NA	NA	NA	28982613	28982766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_28982600_28982800
ES.30475.1	chr7	+	789	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	-248	409	-244	-409	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCCGGATTTTCCT	3759	False	NA	9	True	NA	NA	NA	28988488	28992817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
ES.30475.2	chr7	+	1637	3	ISM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	9	410	9	-410	intron_retention	FALSE	canonical	3	93	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCCGGATTTTCC	4016	False	NA	8	True	NA	NA	NA	28988745	28992816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_28988961_28990934_28991016_28991475
ES.30476.1	chr7	-	167	1	Intergenic	novelGene_25137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTAGCC	NA	False	NA	NA	False	NA	NA	NA	28994424	28994257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_28994300_28994400
ES.30477.1	chr7	+	2270	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	11	2	combination_of_known_junctions	TRUE	canonical	3	21	junction_7	17.2568826848884	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	1775	False	NA	8	True	ATTAAA	-24	NA	29003386	29017011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.10	chr7	+	2161	11	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	20.5338744517444	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTTCCATCTCTAA	5868	False	NA	6	True	ATTAAA	-22	NA	29007479	29017009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.11	chr7	+	2289	11	ISM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	1280	-683	-221	2	3prime_fragment	FALSE	canonical	3	46	junction_6	11.4581848475228	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	7105	False	NA	8	True	ATTAAA	-24	NA	29008716	29017011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.12	chr7	+	470	2	NNC	ENSMUSG00000030584.15	novel	3135	12	NA	NA	1651	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTTCCATCTCTAA	NA	False	NA	6	True	ATTAAA	-22	NA	29016138	29017009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29016349_29016749
ES.30477.2	chr7	+	2298	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	15	-4	15	4	multi-exon	FALSE	canonical	3	46	junction_7	12.1008161735527	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATCTCTAACCTCTTTT	1804	False	NA	14	True	ATTAAA	-30	NA	29003415	29017017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.3	chr7	+	2195	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	22	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	21.9945447781944	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTCCATCTCTAACC	1811	False	NA	8	True	ATTAAA	-24	NA	29003422	29017011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.4	chr7	+	1586	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	23	700	23	0	multi-exon	FALSE	canonical	3	46	junction_7	12.1008161735527	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGGAAAAAAATT	1812	False	NA	NA	False	AAAAAG	-12	NA	29003423	29016313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.5	chr7	+	1561	12	FSM	ENSMUSG00000030584.15	ENSMUST00000108231.8	2040	12	82	397	57	-21	multi-exon	FALSE	canonical	3	12	junction_10	19.1570283587301	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAAACGTG	1846	False	NA	NA	False	NA	NA	NA	29003457	29016292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
ES.30477.6	chr7	+	2445	11	NNC	ENSMUSG00000030584.15	novel	428	5	NA	NA	-1041	-1	intron_retention	FALSE	canonical	0	0	junction_1	22.635370551418	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACTGCTTCCATCTCTA	4696	False	NA	5	True	ATTAAA	-21	NA	29006307	29017008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29006493_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.7	chr7	+	3658	9	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	23	junction_1	18.4238296778927	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTTCCATCTCTAA	5809	False	NA	6	True	ATTAAA	-22	NA	29007420	29017009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29007524_29008835_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29015162_29015668_29015751_29015905
ES.30477.8	chr7	+	2250	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	5	-681	-1	0	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTTCCATCTCTAA	5830	False	NA	6	True	ATTAAA	-22	NA	29007441	29017009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30477.9	chr7	+	1513	11	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	30	26	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	20.5338744517444	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGGCTGGGTGGAGA	5861	False	NA	NA	False	AATATA	-16	NA	29007472	29016354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ES.30478.1	chr7	+	180	1	Intergenic	novelGene_25140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTAGAGGTAG	1346	False	NA	NA	False	NA	NA	NA	29247090	29247270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29247100_29247300
ES.30479.1	chr7	-	7528	21	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-22	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_20	14.7956074562689	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTCTCCTGCAGC	NA	False	NA	-1	True	AATAAA	-17	NA	29218007	29019796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29217889
ES.30479.10	chr7	-	3091	9	NNC	ENSMUSG00000030583.17	novel	2660	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.8746859276655	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	1005	False	NA	-4	True	AATAAA	-14	NA	29041309	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29040782_29040901_29041243
ES.30479.11	chr7	-	7768	23	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-45	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	16.0642434417364	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	NA	False	NA	-4	True	AATAAA	-14	NA	29218111	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29203275_29203341_29217889
ES.30479.13	chr7	-	7868	24	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	18.8694650368008	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	NA	False	NA	-4	True	AATAAA	-14	NA	29217977	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29103729_29103930_29134173_29134251_29217889
ES.30479.14	chr7	-	6984	22	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-36505	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	17.3931464074248	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	3986	False	NA	-4	True	AATAAA	-14	NA	29254571	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29134173_29134251_29217889_29219040_29254398
ES.30479.15	chr7	-	6568	17	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	15.086081126323	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29217963	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077453_29098933_29100575_29134173_29134251_29217889
ES.30479.16	chr7	-	7844	24	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1048247550846	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29217977	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023244_29023323_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29103729_29103930_29134173_29134251_29217889
ES.30479.17	chr7	-	7760	23	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	15.548444688502	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29217971	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29103729_29103930_29134173_29134251_29217889
ES.30479.18	chr7	-	4313	13	NIC	ENSMUSG00000030583.17	novel	2420	13	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	16.6199344830905	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29067242	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29066898
ES.30479.19	chr7	-	9252	22	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-25	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.2254135899733	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29218010	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29022828_29023056_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.20	chr7	-	7669	22	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.2254135899733	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	NA	False	NA	-7	True	AATAAA	-11	NA	29218064	29019802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021729_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.21	chr7	-	7519	22	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-40	-176	combination_of_known_junctions	FALSE	canonical	3	33	junction_11	9.24962461700774	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGATACTCTGTGTAATG	NA	False	NA	NA	False	NA	NA	NA	29218106	29019978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.23	chr7	-	1843	6	NNC	ENSMUSG00000030583.17	novel	6385	5	NA	NA	-36	3175	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.9093280618962	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTTGGTTTGGCCTGTC	985	False	NA	NA	False	NA	NA	NA	29041329	29027353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29027650_29027727_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29041243
ES.30479.24	chr7	-	6122	19	NNC	ENSMUSG00000030583.17	novel	6385	5	NA	NA	-23177	3174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7583226880063	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGTTGGTTTGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	29100347	29027354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29027650_29027727_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ES.30479.25	chr7	-	6443	20	NNC	ENSMUSG00000030583.17	novel	6385	5	NA	NA	16	3173	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	13.6558410381724	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCGTTGGTTTGGCCTG	NA	False	NA	NA	False	NA	NA	NA	29217964	29027355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29027650_29027688_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.26	chr7	-	5871	7	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-5626	-15383	intron_retention	FALSE	canonical	3	33	junction_3	6.54896090146283	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCAGATTGGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	29082796	29045911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620
ES.30479.27	chr7	-	3919	13	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	106089	26694	-21626	-15968	internal_fragment	FALSE	canonical	3	33	junction_4	7.45914800020008	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCTTCTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	29098796	29046496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751
ES.30479.28	chr7	-	4743	15	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-15	-17110	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	7.72486047691187	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCAGAGTTGGGTTGG	NA	False	NA	NA	False	AATACA	-15	NA	29218000	29047638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.29	chr7	-	4260	12	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	10	1636	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	7.76940386153509	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTCGTTGGCTCTTT	NA	False	NA	NA	False	AAGAAA	-37	NA	29218027	29063372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.3	chr7	-	7710	23	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	15.2732683886825	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTGTTCTCCTGCAG	NA	False	NA	-2	True	AATAAA	-16	NA	29218017	29019797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.30	chr7	-	3869	10	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	11	46	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	7.16128135303201	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCCCCTTTCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	29218026	29070166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.31	chr7	-	166	1	NIC	ENSMUSG00000030583.17	novel	2774	8	NA	NA	-6676	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	29083846	29083680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29083700_29083800
ES.30479.32	chr7	-	183	1	Intergenic	novelGene_25138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29199394	29199211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29199200_29199400
ES.30479.33	chr7	-	188	1	Intergenic	novelGene_25139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGACAACA	7263	False	NA	NA	False	NA	NA	NA	29225310	29225122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29225100_29225300
ES.30479.34	chr7	-	3211	1	Intergenic	novelGene_25141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATCTGTGTATCGGTG	4623	False	NA	NA	False	NA	NA	NA	29253934	29250723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29250700_29253900
ES.30479.35	chr7	-	2839	2	Intergenic	novelGene_25142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATCTGTGTATCGGTG	3984	False	NA	NA	False	NA	NA	NA	29254573	29250723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29253388_29254398
ES.30479.36	chr7	-	591	2	Intergenic	novelGene_25143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTGGTGATGCTGG	3883	False	NA	NA	False	NA	NA	NA	29254674	29252755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29253071_29254398
ES.30479.4	chr7	-	8018	22	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	-358	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_11	9.24962461700774	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTGTTCTCCTGCAG	NA	False	NA	-2	True	AATAAA	-16	NA	29218424	29019797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
ES.30479.5	chr7	-	3274	8	NIC	ENSMUSG00000030583.17	novel	3697	10	NA	NA	-313	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.8004815344176	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTGTTCTCCTGCA	708	False	NA	-3	True	AATAAA	-15	NA	29041606	29019798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29041243
ES.30479.6	chr7	-	7879	24	NNC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	19.6696728555852	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	NA	False	NA	-4	True	AATAAA	-14	NA	29218019	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29103729_29103930_29134173_29134251_29187684_29187750_29217889
ES.30479.7	chr7	-	3410	9	NIC	ENSMUSG00000030583.17	novel	4321	14	NA	NA	-354	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	24.1631822200636	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	667	False	NA	-4	True	AATAAA	-14	NA	29041647	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29041243
ES.30479.8	chr7	-	3038	9	NNC	ENSMUSG00000030583.17	novel	4321	14	NA	NA	476	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.5292458124083	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTGTGTTCTCCTGC	1497	False	NA	-4	True	AATAAA	-14	NA	29040817	29019799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031372_29031469_29031649_29031816_29038380_29038603_29040782
ES.3048.1	chr10	+	5665	32	NIC	ENSMUSG00000069601.15	novel	5500	43	NA	NA	-23405	426	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.2908981942249	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	3893	False	NA	35	True	AATAAA	-21	NA	69710555	69861210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
ES.3048.10	chr10	+	3866	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	31.1975960612352	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69761664	69860451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.11	chr10	+	4325	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-119	-455	16	144	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATCGCTGTATTGTGT	NA	False	NA	NA	False	NA	NA	NA	69761664	69860928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.12	chr10	+	4193	18	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	30	10181	16	900	5prime_fragment	FALSE	canonical	3	43	junction_16	15.5066678369289	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATAGGTGGTCACCATG	NA	False	NA	NA	False	ATTAAA	-20	NA	69761664	69841454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439
ES.3048.13	chr10	+	3677	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	16	6	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	31.5033331569851	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCACAAATGCATCCAA	NA	False	NA	NA	False	AATAAA	-34	NA	69761664	69860283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.14	chr10	+	6380	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	308	-1616	21	-868	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTGCATGTCATTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	69761669	69862400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.15	chr10	+	5153	20	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	21	425	intron_retention	FALSE	canonical	1	3	junction_13	24.0203053530149	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGGTTCCACAGTGTT	NA	False	NA	34	True	AATAAA	-20	NA	69761669	69861209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.16	chr10	+	3240	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	21	2	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	27.3196934640477	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGCAGATGTATATATG	NA	False	NA	17	True	AATAAA	-22	NA	69761669	69851637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
ES.3048.17	chr10	+	4635	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	21	426	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	26.6857171535636	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	NA	False	NA	35	True	AATAAA	-21	NA	69761669	69861210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.19	chr10	+	4715	21	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	26	-5	intron_retention	FALSE	canonical	3	8	junction_4	27.7021659802984	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGGAAAAAAAAATAA	NA	False	NA	NA	False	AATGAA	-7	NA	69761674	69860707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.2	chr10	+	4624	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-135	-738	0	427	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTCCACAGTGTTCT	NA	False	NA	36	True	AATAAA	-22	NA	69761648	69861211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.20	chr10	+	3532	18	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	26	852	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	23.225090834928	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCTCACCAATGAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	69761674	69841406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
ES.3048.22	chr10	+	4889	20	NNC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	27	148	intron_retention	FALSE	non_canonical	0	0	junction_8	29.5863448326085	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGCTGTATTGTGTACTG	NA	False	NA	NA	False	NA	NA	NA	69761675	69860932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812084_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.23	chr10	+	3669	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-108	190	27	6	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCACAAATGCATCCAA	NA	False	NA	NA	False	AATAAA	-34	NA	69761675	69860283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.24	chr10	+	6490	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-108	-2631	27	-164	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGACTTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	69761675	69863104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.25	chr10	+	3694	16	NIC	ENSMUSG00000069601.15	novel	3825	19	NA	NA	27	1037	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	24.3191739625799	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTGTAGCGCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	69761675	69836570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184
ES.3048.26	chr10	+	3198	19	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-106	8837	29	1	5prime_fragment	FALSE	canonical	3	64	junction_16	12.9177120246047	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGCAGATGTATATAT	NA	False	NA	16	True	AATAAA	-21	NA	69761677	69851636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
ES.3048.27	chr10	+	3729	16	NIC	ENSMUSG00000069601.15	novel	3825	19	NA	NA	30	1054	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	23.8295801240578	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTGTGGTTCCTTAA	NA	False	NA	NA	False	ATTAAA	-35	NA	69761678	69836587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
ES.3048.28	chr10	+	4073	19	NNC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	30	423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.946318102987	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGGTTCCACAGTG	NA	False	NA	32	True	AATAAA	-18	NA	69761678	69861207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791956_69812035_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.29	chr10	+	4558	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	30	427	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	22.6517657827109	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTCCACAGTGTTCT	NA	False	NA	36	True	AATAAA	-22	NA	69761678	69861211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.3	chr10	+	3819	19	ISM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	287	9144	0	5	5prime_fragment	FALSE	canonical	3	43	junction_16	15.6307705393663	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGATGTATATATGTAT	NA	False	NA	20	True	AATAAA	-25	NA	69761648	69851640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397
ES.3048.30	chr10	+	4278	21	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	30	-3	intron_retention	FALSE	canonical	3	8	junction_4	27.7021659802984	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACACAAAGATATCACAAA	NA	False	NA	NA	False	AATAAA	-25	NA	69761678	69860274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.31	chr10	+	4272	21	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	30	6	intron_retention	FALSE	canonical	3	5	junction_2	31.9319197669041	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCACAAATGCATCCAA	NA	False	NA	NA	False	AATAAA	-34	NA	69761678	69860283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.32	chr10	+	5209	21	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	32	423	intron_retention	FALSE	canonical	3	8	junction_4	27.7021659802984	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTGGGTTCCACAGTG	NA	False	NA	32	True	AATAAA	-18	NA	69761680	69861207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.33	chr10	+	5155	14	ISM	ENSMUSG00000069601.15	ENSMUST00000182687.8	2336	15	34	9321	34	-921	5prime_fragment	FALSE	canonical	3	8	junction_4	31.3455639397064	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAGAGAGTCAATGCAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	69761682	69821019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945
ES.3048.34	chr10	+	3885	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	26.6857171535636	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCTGCAAATTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	69761682	69860473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.36	chr10	+	3864	18	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	57	10483	43	598	5prime_fragment	FALSE	canonical	3	43	junction_16	15.5066678369289	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCGTGGAGTCTAACC	NA	False	NA	NA	False	AATGAA	-20	NA	69761691	69841152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439
ES.3048.37	chr10	+	3558	19	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	43	847	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	27.9428428964521	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTATCTCTCACCAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	69761691	69841401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
ES.3048.38	chr10	+	3555	18	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-91	19041	44	878	5prime_fragment	FALSE	canonical	3	64	junction_16	12.4850083110085	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGAGTTGTTTCGGCTT	NA	False	NA	NA	False	ATTAAA	-45	NA	69761692	69841432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
ES.3048.4	chr10	+	4016	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-130	-135	5	-104	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTACAGTCTCCTGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	69761653	69860608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.40	chr10	+	4850	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	333	-111	46	111	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	69761694	69860895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.42	chr10	+	3164	19	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	46	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	22.8089217978458	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAATGCAGATGTATAT	NA	False	NA	14	True	AATAAA	-19	NA	69761694	69851634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
ES.3048.43	chr10	+	4238	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	333	501	46	6	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCACAAATGCATCCAA	NA	False	NA	NA	False	AATAAA	-34	NA	69761694	69860283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.44	chr10	+	4529	20	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	46	-102	intron_retention	FALSE	canonical	1	3	junction_13	24.0203053530149	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTACAGTCTCCTGCAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	69761694	69860610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.45	chr10	+	5113	13	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	60	30613	46	-918	5prime_fragment	FALSE	canonical	3	68	junction_4	12.1549601215124	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAGTCAATGCAAACAT	NA	False	NA	NA	False	ATTAAA	-18	NA	69761694	69821022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945
ES.3048.46	chr10	+	3730	16	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	60	15046	46	1056	5prime_fragment	FALSE	canonical	3	68	junction_4	11.2853887837327	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTGGTTCCTTAATT	NA	False	NA	NA	False	ATTAAA	-37	NA	69761694	69836589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
ES.3048.47	chr10	+	5566	19	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	46	-86	intron_retention	FALSE	canonical	3	64	junction_16	12.5483017394072	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAGTTTTGCTGTAAAT	NA	False	NA	NA	False	NA	NA	NA	69761694	69860191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69840822_69851397_69851484_69859661
ES.3048.48	chr10	+	4030	18	NIC	ENSMUSG00000069601.15	novel	3825	19	NA	NA	46	803	intron_retention	FALSE	canonical	1	3	junction_13	25.154883543558	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGTTTTACTGTTTT	NA	False	NA	NA	False	GATAAA	-20	NA	69761694	69841357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439
ES.3048.49	chr10	+	3303	19	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	46	595	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	27.9428428964521	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATTCCGTGGAGTCTA	NA	False	NA	NA	False	AATGAA	-17	NA	69761694	69841149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
ES.3048.5	chr10	+	4862	21	NNC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	5	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.2556584183303	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGGTTCCACAGTGTT	NA	False	NA	34	True	AATAAA	-20	NA	69761653	69861209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69821290_69821539_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
ES.3048.50	chr10	+	4323	20	NNC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	46	148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.7907499338762	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGCTGTATTGTGTACTG	NA	False	NA	NA	False	NA	NA	NA	69761694	69860932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838316_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.51	chr10	+	4143	19	NIC	ENSMUSG00000069601.15	novel	3825	19	NA	NA	46	847	intron_retention	FALSE	canonical	3	8	junction_4	29.0270733566841	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTATCTCTCACCAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	69761694	69841401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439
ES.3048.52	chr10	+	4091	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-89	-251	46	12	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATACAGTAGTTTGCT	NA	False	NA	NA	False	AATGAA	-24	NA	69761694	69860724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.53	chr10	+	4669	20	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	56	15	intron_retention	FALSE	canonical	3	13	junction_18	22.1236765414773	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACAGTAGTTTGCTTGG	NA	False	NA	NA	False	AATGAA	-27	NA	69761704	69860727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851400_69851484_69859661
ES.3048.54	chr10	+	4072	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	362	638	-60	-131	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTTTTAAAGAAAA	NA	False	NA	NA	False	TATAAA	-33	NA	69761723	69860146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.55	chr10	+	4188	20	NIC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	-60	0	intron_retention	FALSE	canonical	3	5	junction_2	23.6216718185099	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGATATCACAAATGC	NA	False	NA	NA	False	AATAAA	-28	NA	69761723	69860277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.56	chr10	+	4953	20	NNC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	20	425	intron_retention	FALSE	canonical	0	0	junction_16	27.6386457128801	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGGTTCCACAGTGTT	NA	False	NA	34	True	AATAAA	-20	NA	69761929	69861209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837725_69838432_69840439_69840822_69851400_69851484_69859661
ES.3048.58	chr10	+	3913	16	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	29971	-733	-17874	422	3prime_fragment	FALSE	canonical	3	64	junction_12	13.1172490340857	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTTGGGTTCCACAGT	4229	False	NA	31	True	AATAAA	-17	NA	69791754	69861206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.59	chr10	+	6167	15	ISM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	33385	-2313	-14882	-171	3prime_fragment	FALSE	canonical	3	43	junction_11	16.9681574529157	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGTGGTTTGCTTGAC	7221	False	NA	NA	False	AATAAA	-8	NA	69794746	69863097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.6	chr10	+	3172	19	ISM	ENSMUSG00000069601.15	ENSMUST00000182795.8	3557	20	-252	8815	9	6	5prime_fragment	FALSE	canonical	1	3	junction_13	29.1537537553004	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATGTATATATGTATA	NA	False	NA	21	True	AATAAA	-26	NA	69761657	69851641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69817992_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
ES.3048.60	chr10	+	5695	15	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	33015	-2792	-14830	-3	3prime_fragment	FALSE	canonical	3	64	junction_11	13.5761270062487	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGGTGGCATTGCTTT	7273	False	NA	NA	False	ATTAAA	-16	NA	69794798	69863265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.61	chr10	+	7043	1	Intergenic	novelGene_2380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCATTTAAAATGTATAT	7645	False	NA	NA	False	NA	NA	NA	69795170	69802213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69795200_69802200
ES.3048.62	chr10	+	186	1	Intergenic	novelGene_2381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTTCCCGAGGA	9654	False	NA	NA	False	NA	NA	NA	69797179	69797365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69797200_69797400
ES.3048.63	chr10	+	5706	11	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	50106	15623	2261	4296	internal_fragment	FALSE	canonical	3	64	junction_9	13.2136293273271	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTGTGCTAGTGTG	NA	False	NA	NA	False	NA	NA	NA	69811889	69844850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439
ES.3048.64	chr10	+	3537	13	NNC	ENSMUSG00000069601.15	novel	5072	20	NA	NA	-2234	420	intron_retention	FALSE	canonical	0	0	junction_9	27.5845921162924	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTACTTGGGTTCCACA	NA	False	NA	29	True	AATAAA	-15	NA	69812066	69861204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837932_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.66	chr10	+	1182	1	NIC	ENSMUSG00000069601.15	novel	5500	43	NA	NA	20320	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAATGCAGATGTATAT	NA	False	NA	14	True	AATAAA	-19	NA	69850452	69851634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69850500_69851600
ES.3048.67	chr10	+	1753	1	ISM	ENSMUSG00000069601.15	ENSMUST00000182884.8	9963	43	490703	1211	30172	-1211	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTCATGCCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	69860304	69862057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_69860300_69862100
ES.3048.7	chr10	+	5197	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	301	-426	14	426	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCCACAGTGTTC	NA	False	NA	35	True	AATAAA	-21	NA	69761662	69861210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ES.3048.8	chr10	+	4591	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	16	425	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	22.2338366078531	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGGTTCCACAGTGTT	NA	False	NA	34	True	AATAAA	-20	NA	69761664	69861209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69762022_69763524_69763649_69768238_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ES.30480.1	chr7	-	140	1	Intergenic	novelGene_25144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTCTGTGTACT	NA	False	NA	NA	False	NA	NA	NA	29298331	29298191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29298200_29298300
ES.30481.1	chr7	-	3796	28	NIC	ENSMUSG00000049123.11	novel	3957	29	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.539600717839	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTTGGTGTCTCAC	NA	False	NA	NA	False	NA	NA	NA	29426415	29396641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29397301_29397406_29397507_29397610_29397704_29399729_29399820_29400045_29400142_29400238_29400303_29400490_29400648_29404092_29404150_29404229_29404311_29404495_29404615_29404717_29404917_29405007_29405071_29405814_29406029_29409231_29409342_29409433_29409593_29409847_29409960_29411013_29411144_29411252_29411304_29412151_29412260_29412390_29412451_29416410_29416583_29418856_29419013_29420466_29420540_29420691_29420819_29420942_29421088_29424459_29424514_29424621_29424906_29426352
ES.30481.2	chr7	-	1554	5	ISM	ENSMUSG00000049123.11	ENSMUST00000208607.2	4455	26	25891	0	24145	0	3prime_fragment	FALSE	canonical	0	0	junction_4	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTCTTGGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	29400530	29396643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29397301_29397406_29397507_29397610_29397704_29399729_29400142_29400238
ES.30481.3	chr7	-	6771	25	NNC	ENSMUSG00000049123.11	novel	3957	29	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1.59861050777091	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTCTTGGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	29426450	29396643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29397301_29397406_29397507_29397610_29397704_29400045_29400142_29400238_29400303_29400490_29404150_29404229_29404311_29404495_29404615_29405007_29405081_29405814_29406029_29409231_29409342_29409433_29409593_29409847_29409928_29411252_29411304_29412151_29412260_29412390_29412451_29414265_29414404_29416410_29416583_29418856_29419013_29420466_29420540_29420691_29420819_29420942_29421088_29424459_29424514_29424621_29424706_29426352
ES.30481.4	chr7	-	3547	1	NIC	ENSMUSG00000049123.11	novel	4455	26	NA	NA	20623	-3390	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTTCGCGACTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	29404052	29400505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29400500_29404100
ES.30482.1	chr7	+	156	1	Intergenic	novelGene_25145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29426989	29427145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29427000_29427100
ES.30483.1	chr7	+	1003	1	Intergenic	novelGene_25146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTTTATTTTCTCTAA	NA	False	NA	NA	False	NA	NA	NA	29459893	29460896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29459900_29460900
ES.30484.1	chr7	+	2258	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	-12	1867	-12	-1867	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTAATTCTATTACCA	NA	False	NA	NA	False	NA	NA	NA	29467964	29477379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.2	chr7	+	5720	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	-10	-1597	-10	1597	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCCTCTCATGGTTT	NA	False	NA	3	True	AATATA	-15	NA	29467966	29480843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.3	chr7	+	5508	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	2	-1397	2	1397	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTTTCTGTTGAATGAT	NA	False	NA	NA	False	NA	NA	NA	29467978	29480643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.4	chr7	+	3030	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	10	1073	10	-1073	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAGGAGCTTTTTCCA	NA	False	NA	NA	False	AATAAA	-12	NA	29467986	29478173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.5	chr7	+	2093	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	21	1999	21	-1999	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCATCTGATGACTATT	NA	False	NA	NA	False	AATAGA	-12	NA	29467997	29477247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.6	chr7	+	1311	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	21	2781	21	-2781	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTTACGAGTGTAAC	NA	False	NA	NA	False	NA	NA	NA	29467997	29476465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30484.8	chr7	+	2820	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	55	1238	55	-1238	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGGCGTGGTTCATT	NA	False	NA	NA	False	AATACA	-39	NA	29468031	29478008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ES.30485.1	chr7	-	192	1	Antisense	novelGene_ENSMUSG00000046185.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAAACACTTC	2636	False	NA	NA	False	NA	NA	NA	29478981	29478789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_29478800_29479000
ES.30486.1	chr7	+	1552	4	ISM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	16	4913	-9	-2123	5prime_fragment	FALSE	canonical	3	6	junction_3	9.62635271879577	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATTTGTATGGTTGC	NA	False	NA	NA	False	AAGAAA	-11	NA	29483438	29489214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762
ES.30486.2	chr7	+	1596	4	NIC	ENSMUSG00000047473.15	novel	3707	4	NA	NA	-9	-2123	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	11.6141675934562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATTTGTATGGTTGC	NA	False	NA	NA	False	AAGAAA	-11	NA	29483438	29489214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29484327_29485599_29485729_29487473_29487601_29488762
ES.30486.3	chr7	+	2715	4	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	-9	-700	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.03081145609604	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCGAGTGACTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	29483438	29493427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29484327_29485643_29485729_29488762_29488862_29491784
ES.30486.4	chr7	+	3587	5	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	10.1827059272082	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATGTTAAACATGAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	29483438	29494128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29484327_29485599_29485729_29487473_29487601_29488762_29488862_29491784
ES.30486.5	chr7	+	3402	4	FSM	ENSMUSG00000047473.15	ENSMUST00000122387.2	3342	4	-61	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_2	8.65383665716478	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATGTTAAACATGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	29483447	29494126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29484327_29485643_29485729_29488765_29488862_29491784
ES.30486.7	chr7	+	2559	5	FSM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	294	705	208	-705	multi-exon	FALSE	canonical	3	6	junction_3	9.39414711402797	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTCTCCGAGTGACTG	NA	False	NA	NA	False	NA	NA	NA	29483716	29493422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762_29488862_29491784
ES.30486.8	chr7	+	3112	5	FSM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	445	1	359	-1	multi-exon	FALSE	canonical	3	6	junction_3	9.39414711402797	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATGTTAAACATGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	29483867	29494126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762_29488862_29491784
ES.30487.1	chr7	-	5452	1	Antisense	novelGene_ENSMUSG00000047473.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTATTATCCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	29491016	29485564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_29485600_29491000
ES.30488.1	chr7	+	3535	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-95	-64	-90	-1	multi-exon	TRUE	canonical	3	32	junction_1	5.78791845139511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGAGTTAATTTCTT	NA	False	NA	NA	False	AAGAAA	-17	NA	29515448	29530429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.10	chr7	+	3382	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-26	0	-26	0	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGAGTTAATTTCTTT	NA	False	NA	NA	False	AAGAAA	-18	NA	29515512	29530430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.11	chr7	+	4654	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-19	-1259	-14	1194	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29515524	29531624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.12	chr7	+	4447	5	NNC	ENSMUSG00000011427.17	novel	3356	5	NA	NA	-12	1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9304210770411	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29515526	29531624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29515600_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.13	chr7	+	4172	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-15	-781	-10	716	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACAGAAGAGGTGAGCC	NA	False	NA	NA	False	AGTAAA	-6	NA	29515528	29531146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.14	chr7	+	3977	6	NNC	ENSMUSG00000011427.17	novel	3376	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0299775336868	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTGAGTTAATTTCT	NA	False	NA	NA	False	AAGAAA	-16	NA	29515533	29530428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29515715_29517334_29517863_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.16	chr7	+	3474	5	NIC	ENSMUSG00000011427.17	novel	377	2	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.5124955389002	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATTGAGTTAATTTC	NA	False	NA	NA	False	AAGAAA	-15	NA	29518416	29530427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29518624_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.17	chr7	+	3706	5	NIC	ENSMUSG00000011427.17	novel	377	2	NA	NA	6	234	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.5124955389002	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGACATGATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	29518421	29530664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29518624_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.18	chr7	+	4462	5	NIC	ENSMUSG00000011427.17	novel	377	2	NA	NA	47	1031	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.5124955389002	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGATTTATTTTTAAAG	NA	False	NA	6	True	AATAAA	-19	NA	29518462	29531461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29518624_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.2	chr7	+	4545	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-66	-1103	-61	1038	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTTTAAAGAATTTAT	NA	False	NA	13	True	AATAAA	-26	NA	29515477	29531468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.3	chr7	+	4422	6	NNC	ENSMUSG00000011427.17	novel	3376	5	NA	NA	-43	1026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.0573970493352	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGACCAGATTTATTTT	NA	False	NA	1	True	AATAAA	-14	NA	29515495	29531456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545_29527690_29527782
ES.30488.4	chr7	+	4427	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-38	-1033	-38	1033	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATTTATTTTTAAAGAA	NA	False	NA	8	True	AATAAA	-21	NA	29515500	29531463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.5	chr7	+	3817	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	-37	-404	-32	339	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAATTGCATTTTAAAAG	NA	False	NA	NA	False	CATAAA	-26	NA	29515506	29530769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.6	chr7	+	4599	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	-29	-1214	-29	1214	multi-exon	FALSE	canonical	2	3	junction_1	16.6789538041209	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATTTATGTGGATAT	NA	False	NA	NA	False	NA	NA	NA	29515509	29531644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ES.30488.9	chr7	+	3831	6	NNC	ENSMUSG00000011427.17	novel	3376	5	NA	NA	-26	1036	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	16.0573970493352	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTTTAAAGAATTT	NA	False	NA	11	True	AATAAA	-24	NA	29515512	29531466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545_29527618_29528294
ES.30489.1	chr7	-	177	1	Intergenic	novelGene_25147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGCACAAA	NA	False	NA	NA	False	NA	NA	NA	29525017	29524840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29524800_29525000
ES.3049.1	chr10	-	3706	2	Antisense	novelGene_ENSMUSG00000069601.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	69836055	69831221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_69834057_69835184
ES.30490.1	chr7	+	170	1	Intergenic	novelGene_25149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGGGGGTTAA	5154	False	NA	NA	False	NA	NA	NA	29540200	29540370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29540200_29540400
ES.30491.1	chr7	-	9414	4	NNC	ENSMUSG00000050855.17	novel	3712	4	NA	NA	8437	-898	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGAGTTGTCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	29544430	29533942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29535984_29536374_29536580_29537154_29540543_29540650
ES.30491.10	chr7	-	3001	5	NIC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	7	3	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	18.7082869338697	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGACTTTGTGGTGTTC	3430	False	NA	-1	True	AATAAA	-24	NA	29553087	29543357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552701
ES.30491.11	chr7	-	2823	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	-60	1	-39	-1	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGTGTGACTTTGTGGT	3384	False	NA	-5	True	AATAAA	-20	NA	29553133	29543361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
ES.30491.12	chr7	-	2859	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGTGACTTTGTGG	3418	False	NA	-6	True	AATAAA	-19	NA	29553099	29543362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
ES.30491.13	chr7	-	3222	4	NIC	ENSMUSG00000050855.17	novel	3712	4	NA	NA	22	-2	intron_retention	FALSE	canonical	2	6	junction_3	21.2289111041209	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGTGACTTTGTGG	3473	False	NA	-6	True	AATAAA	-19	NA	29553044	29543362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29545674_29545893_29546386_29550366_29550443_29552701
ES.30491.14	chr7	-	3389	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	-7	-2	intron_retention	FALSE	canonical	0	0	junction_4	24.7828065400188	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGTGACTTTGTGG	3416	False	NA	-6	True	AATAAA	-19	NA	29553101	29543362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29546386_29550366_29550443_29551581_29551692_29552701
ES.30491.15	chr7	-	3552	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	21.32340263654	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGTGACTTTGTGG	3437	False	NA	-6	True	AATAAA	-19	NA	29553080	29543362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29546386_29548074_29548369_29550366_29550443_29552701
ES.30491.16	chr7	-	3132	6	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.0217288664427	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTGGTGTGACTTTGTG	3418	False	NA	-7	True	AATAAA	-18	NA	29553099	29543363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29548074_29548345_29550366_29550443_29552846
ES.30491.2	chr7	-	3530	2	NNC	ENSMUSG00000050855.17	novel	2560	4	NA	NA	14980	-898	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGAGTTGTCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	29537887	29533942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29536723_29537137
ES.30491.3	chr7	-	213	1	Intergenic	novelGene_25148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29536954	29536741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29536700_29537000
ES.30491.4	chr7	-	3959	5	NIC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	1	269	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	18.7082869338697	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTAGTTCAGTTGAAA	3424	False	NA	NA	False	AGTAAA	-13	NA	29553093	29542405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552701
ES.30491.5	chr7	-	3788	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	2	269	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTAGTTCAGTTGAAA	3446	False	NA	NA	False	AGTAAA	-13	NA	29553071	29542405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
ES.30491.6	chr7	-	3102	4	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	2433	-218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.8619042659763	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTGATGGCTTATATT	6083	False	NA	NA	False	NA	NA	NA	29550434	29542892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550336
ES.30491.7	chr7	-	3135	4	NNC	ENSMUSG00000050855.17	novel	3712	4	NA	NA	-5	5	intron_retention	FALSE	canonical	3	27	junction_3	11.3431330181157	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTTTGTGGTGTTCGT	3418	False	NA	1	True	AATAAA	-26	NA	29553099	29543355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29546386_29550366_29550443_29552850
ES.30491.8	chr7	-	3980	1	NIC	ENSMUSG00000050855.17	novel	2560	4	NA	NA	5531	4	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGACTTTGTGGTGTTCG	9181	False	NA	0	True	AATAAA	-25	NA	29547336	29543356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29543400_29547300
ES.30491.9	chr7	-	3068	7	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	-15	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	24.2882001528863	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGACTTTGTGGTGTTC	3408	False	NA	-1	True	AATAAA	-24	NA	29553109	29543357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29550579_29550735_29551581_29551692_29552921
ES.30492.1	chr7	+	3935	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	-79	-1112	-17	647	multi-exon	FALSE	canonical	2	5	junction_1	17.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCGGTGGTTGTGTTCGA	NA	False	NA	NA	False	NA	NA	NA	29559386	29577364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29559519_29572316_29572359_29573603
ES.30492.10	chr7	+	4906	2	FSM	ENSMUSG00000058402.15	ENSMUST00000130272.2	768	2	-735	-3403	-735	647	multi-exon	FALSE	canonical	3	40	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCGGTGGTTGTGTTCGA	NA	False	NA	NA	False	NA	NA	NA	29571213	29577364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29572359_29573603
ES.30492.11	chr7	+	2776	2	FSM	ENSMUSG00000058402.15	ENSMUST00000130272.2	768	2	362	-2370	362	79	multi-exon	FALSE	canonical	3	40	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGATCGGTGTTCGACC	NA	False	NA	NA	False	AATAAA	-21	NA	29572310	29576331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29572359_29573603
ES.30492.12	chr7	+	3358	4	Antisense	novelGene_ENSMUSG00000062040.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTCTGGGATAATAT	NA	False	NA	NA	False	AATAAA	-8	NA	29577320	29601588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29577831_29593462_29595814_29598827_29598887_29601150
ES.30492.13	chr7	+	2929	2	Antisense	novelGene_ENSMUSG00000062040.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	AATGAA	-22	NA	29577321	29595882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29577831_29593462
ES.30492.14	chr7	+	1018	3	Antisense	novelGene_ENSMUSG00000062040.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATTTTGTATGGTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	29577322	29601601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29577831_29598827_29598887_29601150
ES.30492.15	chr7	+	2093	1	Intergenic	novelGene_25151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTATTTTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	29587487	29589580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29587500_29589600
ES.30492.2	chr7	+	2521	4	NNC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	-17	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1334630345285	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTGGATCAGCTC	NA	False	NA	NA	False	AATATA	-38	NA	29559386	29575895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29559519_29560438_29560494_29572316_29572359_29573603
ES.30492.3	chr7	+	3335	4	NNC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1334630345285	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGTGTTTTATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	29559396	29576719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29559519_29560438_29560494_29572316_29572359_29573603
ES.30492.4	chr7	+	2393	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	-6	150	-6	-150	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGTCCTATCAGTTGG	NA	False	NA	NA	False	NA	NA	NA	29559397	29575780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
ES.30492.5	chr7	+	3140	1	NIC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	10	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTGTGTTTTCTCAAC	NA	False	NA	NA	False	TATAAA	-26	NA	29559413	29562553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29559400_29562600
ES.30492.6	chr7	+	2923	4	NNC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	-4	83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1334630345285	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCGGTGTTCGACCCAGT	NA	False	NA	NA	False	AATAAA	-25	NA	29559424	29576335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29559519_29560438_29560494_29572316_29572359_29573603
ES.30492.8	chr7	+	3417	5	NNC	ENSMUSG00000058402.15	novel	2537	4	NA	NA	10	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.7270979012358	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCTCTCCGAGATCAC	NA	False	NA	NA	False	AGTAAA	-17	NA	29559475	29576673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29559519_29560440_29560494_29572316_29572359_29572728_29572938_29573603
ES.30492.9	chr7	+	3438	4	NNC	ENSMUSG00000058402.15	novel	768	2	NA	NA	76	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1334630345285	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGTGTTTTATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	29559541	29576719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29559767_29560438_29560494_29572316_29572359_29573603
ES.30493.1	chr7	+	164	1	Intergenic	novelGene_25152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	29602309	29602473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29602300_29602500
ES.30494.1	chr7	+	137	1	Intergenic	novelGene_25153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAACCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	29606540	29606677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29606500_29606700
ES.30495.1	chr7	+	2625	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	-8	-3	-8	3	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTCATAATTTTCTTT	NA	False	NA	30	True	AATAAA	-27	NA	29607933	29616235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ES.30495.2	chr7	+	1609	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	12	993	12	-993	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTCTGGCATTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	29607953	29615239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ES.30495.3	chr7	+	2748	5	NNC	ENSMUSG00000099689.7	novel	2614	5	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.1719398723195	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTACACTAAGTTTCAT	NA	False	NA	20	True	AATAAA	-17	NA	29607966	29616225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608077_29609607_29609673_29611593_29611887_29612014_29612111_29614041
ES.30495.4	chr7	+	3606	4	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	26	-990	intron_retention	FALSE	canonical	0	0	junction_3	14.9740516301441	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGGCATTGTTTGACT	NA	False	NA	NA	False	AATAAA	-20	NA	29607967	29615242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608077_29609607_29609673_29611593_29612188_29612404
ES.30495.5	chr7	+	4595	4	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	29	2	intron_retention	FALSE	canonical	0	0	junction_3	14.9740516301441	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCATAATTTTCTT	NA	False	NA	29	True	AATAAA	-26	NA	29607970	29616234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608077_29609607_29609673_29611593_29612188_29612404
ES.30495.7	chr7	+	2564	5	NNC	ENSMUSG00000099689.7	novel	2614	5	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.337861650178	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAGTTTCATAATTTT	NA	False	NA	26	True	AATAAA	-23	NA	29607973	29616231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608057_29609607_29609673_29611593_29611721_29612011_29612111_29614041
ES.30495.8	chr7	+	4530	4	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	256	3	intron_retention	FALSE	canonical	0	0	junction_3	16.2685791225499	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTCATAATTTTCTTT	NA	False	NA	30	True	AATAAA	-27	NA	29608197	29616235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608238_29609607_29609673_29611593_29612188_29612404
ES.30495.9	chr7	+	1797	4	NNC	ENSMUSG00000099689.7	novel	3208	4	NA	NA	275	-997	intron_retention	FALSE	canonical	1	1	junction_1	14.3836326735943	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTACTCTCTGGCATTG	NA	False	NA	NA	False	AATAAA	-13	NA	29608216	29615235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29608238_29609607_29609673_29611593_29612111_29614041
ES.30496.1	chr7	+	180	1	Intergenic	novelGene_25156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAATACAAAGC	NA	False	NA	NA	False	NA	NA	NA	29644880	29645060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29644900_29645100
ES.30497.1	chr7	+	175	1	Intergenic	novelGene_25157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	29647330	29647505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29647300_29647500
ES.30498.1	chr7	+	172	1	Intergenic	novelGene_25158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29650456	29650628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29650500_29650600
ES.30499.1	chr7	+	950	5	FSM	ENSMUSG00000063623.5	ENSMUST00000239012.2	809	5	263	-404	188	-18	multi-exon	FALSE	canonical	1	1	junction_1	40.4722126896961	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAATTGTCACATATA	NA	False	NA	NA	False	ATTAAA	-35	NA	29653350	29665177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29653382_29656384_29656460_29660317_29660445_29662570_29662667_29664556
ES.30499.2	chr7	+	161	1	Intergenic	novelGene_25160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	29660508	29660669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29660500_29660700
ES.305.1	chr1	+	993	6	NNC	ENSMUSG00000050122.20	novel	1636	8	NA	NA	3028	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7575507653593	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCATATCTTCTGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	37077816	37102722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37077923_37081375_37081471_37084038_37084290_37090797_37090961_37099410_37099581_37102514
ES.305.10	chr1	+	1291	8	NIC	ENSMUSG00000050122.20	novel	4717	27	NA	NA	-55	-5	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	16.9440857179231	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTTGCAGATTTCTC	NA	False	NA	0	True	AATAAA	-17	NA	37139693	37180412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37139908_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
ES.305.11	chr1	+	1628	7	ISM	ENSMUSG00000050122.20	ENSMUST00000027289.14	3394	25	64908	50460	-52	-5187	internal_fragment	FALSE	canonical	3	41	junction_1	6.76798016808232	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATACTCATGCCTTGTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	37139696	37175230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515
ES.305.12	chr1	+	1624	10	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71303	44549	-32	1720	intron_retention	FALSE	canonical	2	5	junction_9	16.8134279082135	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGATGAGGTAACGTGA	NA	False	NA	NA	False	NA	NA	NA	37139716	37182137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171_37180286_37181809
ES.305.13	chr1	+	4592	8	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71336	46275	1	-6	intron_retention	FALSE	canonical	3	35	junction_7	7.9179465488863	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATGTTGCAGATTTCT	NA	False	NA	-1	True	AATAAA	-16	NA	37139749	37180411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810
ES.305.14	chr1	+	1133	8	NNC	ENSMUSG00000050122.20	novel	462	3	NA	NA	13215	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4779622710735	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCAGATTTCTCCC	NA	False	NA	2	True	AATAAA	-19	NA	37152963	37180414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37153018_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
ES.305.2	chr1	+	1308	5	NNC	ENSMUSG00000050122.20	novel	1636	8	NA	NA	6955	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.0989864402116	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCATATCTTCTGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	37081743	37102722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37082066_37083844_37084290_37090797_37090961_37099410_37099581_37102514
ES.305.3	chr1	+	6033	22	NNC	ENSMUSG00000050122.20	novel	665	5	NA	NA	7191	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	21.8579209323072	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATTATTCTGATTGC	NA	False	NA	NA	False	AATAAA	-13	NA	37081979	37226684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37082066_37083844_37084290_37090797_37090961_37099410_37099581_37102514_37102631_37124313_37124440_37139716_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171_37180286_37196413_37196533_37203580_37203632_37204726_37204929_37212915_37213028_37214576_37216548_37218197_37218299_37225609
ES.305.4	chr1	+	2486	15	NNC	ENSMUSG00000050122.20	novel	665	5	NA	NA	7236	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.0016111024775	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCAGATTTCTCCC	NA	False	NA	2	True	AATAAA	-19	NA	37082024	37180414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37082066_37083844_37084290_37090797_37090961_37099410_37099581_37102514_37102631_37124313_37124440_37139716_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
ES.305.5	chr1	+	876	5	NNC	ENSMUSG00000050122.20	novel	1636	8	NA	NA	8360	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0989864402116	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCTTCTGCATTATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	37083148	37102728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37083227_37084038_37084290_37090797_37090961_37099410_37099581_37102514
ES.305.6	chr1	+	3261	2	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGCTAAGATCAAAGTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	37111421	37114721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37113211_37113249
ES.305.7	chr1	+	1505	9	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71223	46272	25	-3	internal_fragment	FALSE	canonical	3	35	junction_7	9.96164519544839	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGCAGATTTCTCCC	NA	False	NA	2	True	AATAAA	-19	NA	37139636	37180414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
ES.305.8	chr1	+	1617	10	NNC	ENSMUSG00000050122.20	novel	4717	27	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.3087282823038	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTTGCAGATTTCTCC	NA	False	NA	1	True	AATAAA	-18	NA	37139646	37180413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37179243_37179367_37180171
ES.305.9	chr1	+	3491	19	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71276	2	-59	-2	intron_retention	FALSE	canonical	0	0	junction_10	24.0211455201197	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACATTATTCTGATTGC	NA	False	NA	NA	False	AATAAA	-13	NA	37139689	37226684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171_37180286_37181809_37181898_37181991_37182149_37196413_37196533_37203580_37203632_37204726_37204929_37212915_37213028_37214576_37214702_37216409_37216548_37218197_37218299_37225609
ES.3050.1	chr10	-	2154	1	Intergenic	novelGene_2382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACCTTGGAAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	69859569	69857415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69857400_69859600
ES.30500.1	chr7	-	169	2	Antisense	novelGene_ENSMUSG00000109105.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTGGT	NA	False	NA	NA	False	NA	NA	NA	29652579	29556077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_29556205_29652537
ES.30500.10	chr7	-	3430	5	NNC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	-10	-108	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	21.6679486800205	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAAAGTGTACCTGG	NA	False	NA	NA	False	AGTAAA	-16	NA	29605539	29592865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603329_29603485_29605478
ES.30500.11	chr7	-	3212	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	5	-67	5	66	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGATCTAACATAACTG	NA	False	NA	67	True	AATAGA	-24	NA	29605524	29593073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ES.30500.12	chr7	-	3188	5	NIC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	7	60	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	18.1245689603919	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGGTCAGATCTAACA	NA	False	NA	61	True	AATAGA	-18	NA	29605522	29593079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605478
ES.30500.13	chr7	-	3482	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	-15	60	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGGTCAGATCTAACA	NA	False	NA	61	True	AATAGA	-18	NA	29605972	29593079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
ES.30500.14	chr7	-	3171	5	NNC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.2654262230036	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCTCTTCTGTCACTT	NA	False	NA	2	True	AATATA	-18	NA	29605522	29593138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605452
ES.30500.15	chr7	-	3423	5	FSM	ENSMUSG00000062040.15	ENSMUST00000162592.8	3845	5	40	382	0	0	multi-exon	FALSE	canonical	3	4	junction_4	18.5522909636519	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTTCTCTTCTGTCACT	NA	False	NA	1	True	AATATA	-17	NA	29605957	29593139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605634
ES.30500.16	chr7	-	3008	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	3	139	3	-139	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTGGAACATTGTCATC	NA	False	NA	NA	False	AATAGA	-21	NA	29605526	29593279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ES.30500.17	chr7	-	216	1	Intergenic	novelGene_25154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGGGAAAGGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	29612407	29612191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29612200_29612400
ES.30500.18	chr7	-	149	1	Intergenic	novelGene_25155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29620523	29620374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29620400_29620500
ES.30500.19	chr7	-	4249	4	NNC	ENSMUSG00000059975.16	novel	2060	7	NA	NA	11880	7580	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTACTGCTGTTGCTACAG	NA	False	NA	NA	False	NA	NA	NA	29631050	29622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29623485_29623681_29626145_29629879_29630375_29630584
ES.30500.2	chr7	-	170	1	Intergenic	novelGene_25150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGATTGG	269	False	NA	NA	False	NA	NA	NA	29556248	29556078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29556100_29556200
ES.30500.20	chr7	-	8639	9	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	11	6751	intron_retention	FALSE	non_canonical	0	0	junction_1	22.3997767846021	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTTGCAAAAAATTATG	NA	False	NA	NA	False	NA	NA	NA	29653501	29623488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29626145_29629879_29630211_29630283_29630375_29630584_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.21	chr7	-	4938	9	NNC	ENSMUSG00000059975.16	novel	2060	7	NA	NA	-38	6751	intron_retention	FALSE	non_canonical	0	0	junction_1	23.7877988683274	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTTGCAAAAAATTATG	5340	False	NA	NA	False	NA	NA	NA	29643218	29623488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29626145_29629879_29630211_29630283_29630375_29630584_29631900_29635363_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
ES.30500.22	chr7	-	4927	10	NNC	ENSMUSG00000059975.16	novel	1278	7	NA	NA	43	6742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.206953942995	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTAGTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	29653469	29623497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29626145_29629879_29630211_29630283_29630375_29630584_29631666_29631767_29631900_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.23	chr7	-	2105	8	NNC	ENSMUSG00000059975.16	novel	1278	7	NA	NA	137	-1	intron_retention	FALSE	non_canonical	1	3	junction_1	20.704923992882	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAGGGAGCATTTTAT	NA	False	NA	NA	False	AATATA	-14	NA	29653375	29630240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29630375_29630584_29631900_29635363_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.24	chr7	-	3699	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-40	-420	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.4230655551318	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGCATTTATCTTCAAC	5338	False	NA	NA	False	CATAAA	-30	NA	29643220	29631555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29631564_29632219_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
ES.30500.26	chr7	-	3957	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	238	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.0770016843004	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCTGCTCATCAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	29653274	29632085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653155
ES.30500.28	chr7	-	3799	5	NIC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-17	127	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	18.3626659284539	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAGTCTGCTCATCAAA	5361	False	NA	NA	False	AATAAA	-18	NA	29643197	29632088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
ES.30500.29	chr7	-	3646	7	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	170	127	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.303940504247	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAGTCTGCTCATCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	29653342	29632088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29633984_29634235_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.3	chr7	-	4291	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	14	-1155	14	772	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGCAGTTGGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	29605515	29591985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ES.30500.30	chr7	-	4044	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	24	127	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAGTCTGCTCATCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	29653488	29632088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.31	chr7	-	3708	5	ISM	ENSMUSG00000059975.16	ENSMUST00000108212.8	2060	7	-51	1969	-51	7	5prime_fragment	FALSE	canonical	2	4	junction_4	20.9568008054665	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTCGTGGTCCATTT	5327	False	NA	NA	False	AATAAA	-23	NA	29643231	29632208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29643056
ES.30500.33	chr7	-	3918	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGATATTGCTCGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	29653488	29632214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.34	chr7	-	5440	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	265	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	21.0770016843004	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGATATTGCTCGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	29653247	29632215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29652388_29652587
ES.30500.36	chr7	-	3721	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	3	-217	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGGTTTGCTCTAA	NA	False	NA	76	True	TATAAA	-13	NA	29653509	29632432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.37	chr7	-	3424	5	ISM	ENSMUSG00000059975.16	ENSMUST00000108212.8	2060	7	-72	2274	-72	-298	5prime_fragment	FALSE	canonical	2	4	junction_4	20.9568008054665	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTATTTTCTTTTAGTG	5306	False	NA	-5	True	AATAAA	-17	NA	29643252	29632513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29643056
ES.30500.4	chr7	-	3590	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	6	-446	6	63	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGGTCAAATTAAGACC	NA	False	NA	NA	False	AGTAAA	-13	NA	29605523	29592694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ES.30500.40	chr7	-	3589	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	137	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.8485697472397	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTCTATTTTCTTTTA	NA	False	NA	-8	True	AATAAA	-14	NA	29653375	29632516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29643057_29651138_29651316_29653279
ES.30500.41	chr7	-	4283	5	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	22	-301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.202678251204	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTCTATTTTCTTTTA	NA	False	NA	-8	True	AATAAA	-14	NA	29653490	29632516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29632634_29639143_29639341_29639389_29642971_29651138_29651316_29653279
ES.30500.42	chr7	-	3721	7	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	34	-302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.8723456930585	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATAGTCTATTTTCTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	29653478	29632517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29649516_29649633_29651138_29651316_29653279
ES.30500.44	chr7	-	3619	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	246	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.0770016843004	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGGAATAGTCTATTT	NA	False	NA	-15	True	AATAAA	-7	NA	29653266	29632523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653047
ES.30500.45	chr7	-	3537	4	NNC	ENSMUSG00000059975.16	novel	2040	4	NA	NA	2315	-329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7790233867277	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAATAAACCCTG	7943	False	NA	-36	True	AATAAA	-32	NA	29640615	29632544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29640225
ES.30500.46	chr7	-	3519	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	11	-411	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACTCAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	29653501	29632626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.47	chr7	-	5094	2	NNC	ENSMUSG00000059975.16	novel	2040	4	NA	NA	4657	-714	intron_retention	FALSE	non_canonical	0	0	junction_1	0	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGACTTGGCAATTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	29638273	29632929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29637117_29637366
ES.30500.48	chr7	-	3248	6	NNC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-19	-714	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	15.0119952038362	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGACTTGGCAATTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	29653533	29632929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138_29651316_29653279
ES.30500.49	chr7	-	2998	5	NIC	ENSMUSG00000059975.16	novel	3711	5	NA	NA	-60	-717	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	18.3626659284539	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAGACTTGGCAATT	5318	False	NA	NA	False	AATAAA	-18	NA	29643240	29632932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29643056
ES.30500.5	chr7	-	3791	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTCTTTTGAATTTC	NA	False	NA	NA	False	AAAAAG	-24	NA	29605956	29592754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
ES.30500.6	chr7	-	3583	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	6	-105	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	19.4084388862165	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGTGTACCTGGCCT	NA	False	NA	NA	False	AGTAAA	-19	NA	29605523	29592862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605301
ES.30500.7	chr7	-	3701	5	NIC	ENSMUSG00000062040.15	novel	3845	5	NA	NA	-17	-105	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	15.9902313929474	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAAGTGTACCTGGCCT	NA	False	NA	NA	False	AGTAAA	-19	NA	29605974	29592862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605634
ES.30500.8	chr7	-	3446	5	NIC	ENSMUSG00000062040.15	novel	3150	5	NA	NA	-36	-107	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	18.1245689603919	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAAGTGTACCTGGC	NA	False	NA	NA	False	AGTAAA	-17	NA	29605565	29592864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603469_29605478
ES.30501.1	chr7	-	161	1	Intergenic	novelGene_25159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29657059	29656898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29656900_29657100
ES.30502.1	chr7	-	183	1	Intergenic	novelGene_25161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTTT	NA	False	NA	-1	True	NA	NA	NA	29661388	29661205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29661200_29661400
ES.30503.1	chr7	-	490	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	6	-148	6	148	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGTGTGGACATAACCC	NA	False	NA	NA	False	AATAAA	-42	NA	29664984	29664494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29664500_29665000
ES.30504.1	chr7	-	174	1	Intergenic	novelGene_25162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCATACATGGCCCAG	NA	False	NA	1	True	NA	NA	NA	29672349	29672175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29672200_29672300
ES.30505.1	chr7	+	7372	10	NNC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-894	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6615550430347	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAGACTCACTTTCTCT	NA	False	NA	20	True	AATAAA	-23	NA	29682485	29727708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29682948_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.11	chr7	+	3100	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-20	532	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTGGAAAGGACATGCT	NA	False	NA	NA	False	TATAAA	-16	NA	29683359	29723604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.13	chr7	+	1014	4	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	1	245	combination_of_known_junctions	FALSE	canonical	3	234	junction_3	16.0485374896143	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGAATATTCATGTTTC	NA	False	NA	NA	False	AAGAAA	-17	NA	29683380	29688922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473
ES.30505.15	chr7	+	3450	11	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	3	-631	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	94.3411363086114	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTGCTTTCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	29683382	29723905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29707938_29708011_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.16	chr7	+	1423	6	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	5	9538	combination_of_known_junctions	FALSE	canonical	3	228	junction_5	18.2362276800878	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACATTTTAAAAGTG	NA	False	NA	NA	False	AATACA	-9	NA	29683384	29698215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539
ES.30505.17	chr7	+	7274	11	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.3163154974006	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	18	True	AATAAA	-21	NA	29683384	29727706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29701784_29701882_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.18	chr7	+	7242	11	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	102.33005423628	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683385	29727707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29707938_29708011_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.19	chr7	+	1861	6	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	26	9997	combination_of_known_junctions	FALSE	canonical	3	228	junction_5	18.2362276800878	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	29683405	29698674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539
ES.30505.2	chr7	+	7307	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683255	29727707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.20	chr7	+	2624	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	27	103	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCGTTAGGTCCAG	NA	False	NA	NA	False	NA	NA	NA	29683406	29723175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.21	chr7	+	5788	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	28	-1367	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAGTACTGATTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	29683407	29726340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.23	chr7	+	3974	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAAAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	29683410	29724529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.24	chr7	+	6322	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	33	-828	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGAGCTCACCGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	29683412	29726879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.25	chr7	+	6542	11	NNC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	90	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.3477591972982	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCAAGACTCACTTTC	NA	False	NA	17	True	AATAAA	-20	NA	29683469	29727705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642_29721705_29722250
ES.30505.26	chr7	+	3235	10	FSM	ENSMUSG00000074221.13	ENSMUST00000148442.8	4005	10	139	631	139	-631	multi-exon	FALSE	canonical	3	18	junction_2	68.6080296204101	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTGCTTTCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	29683518	29723905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.27	chr7	+	3201	10	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	189	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.2170262040858	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCAAGACTCACTTTC	NA	False	NA	17	True	AATAAA	-20	NA	29683568	29727705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29725433
ES.30505.28	chr7	+	5565	10	NNC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-78	-1368	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	85.2822474398691	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTAGTACTGATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	29683707	29726339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683735_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.29	chr7	+	3225	10	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-31	-566	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	73.6615550430347	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCCTTATATGTCCA	NA	False	NA	NA	False	CATAAA	-18	NA	29683754	29723970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683808_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.3	chr7	+	3488	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-105	-629	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCTTTCTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	29683274	29723907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.30	chr7	+	6957	10	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.7554662980734	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	18	True	AATAAA	-21	NA	29683755	29727706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683808_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.31	chr7	+	6843	8	FSM	ENSMUSG00000074221.13	ENSMUST00000074322.12	2016	8	-193	-4634	-193	-1	multi-exon	FALSE	canonical	3	169	junction_4	21.6710095072017	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	18	True	AATAAA	-21	NA	29687004	29727706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.32	chr7	+	6617	7	ISM	ENSMUSG00000074221.13	ENSMUST00000074322.12	2016	8	1274	-4633	1274	-2	3prime_fragment	FALSE	canonical	3	169	junction_3	21.5516176242579	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTCAAGACTCACTTTC	NA	False	NA	17	True	AATAAA	-20	NA	29688471	29727705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.33	chr7	+	6287	3	ISM	ENSMUSG00000074221.13	ENSMUST00000146074.8	6867	9	29765	0	27291	0	3prime_fragment	FALSE	canonical	3	198	junction_2	5.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29714488	29727707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29714615_29716591_29716688_29721642
ES.30505.34	chr7	+	178	1	Intergenic	novelGene_25167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	29715497	29715675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29715500_29715700
ES.30505.35	chr7	+	6057	1	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	34444	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACGTACGGTCAAGACT	NA	False	NA	10	True	AATAAA	-13	NA	29721641	29727698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29721600_29727700
ES.30505.36	chr7	+	4036	1	ISM	ENSMUSG00000074221.13	ENSMUST00000146074.8	6867	9	37327	1621	34853	1550	mono-exon	FALSE	NA	NA	NA	NA	NA	494	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATCACCTGGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	29722050	29726086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29722000_29726100
ES.30505.37	chr7	+	2528	2	NNC	ENSMUSG00000074221.13	novel	2016	8	NA	NA	35513	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTACGGTCAAGACTCA	NA	False	NA	12	True	AATAAA	-15	NA	29722710	29727700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29722972_29725433
ES.30505.38	chr7	+	1633	2	NNC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	38799	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTCAAGACTCACTTTCT	NA	False	NA	18	True	AATAAA	-21	NA	29725996	29727706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29726933_29727009
ES.30505.4	chr7	+	7219	10	FSM	ENSMUSG00000074221.13	ENSMUST00000148442.8	4005	10	-43	-3171	-43	0	multi-exon	FALSE	canonical	3	18	junction_2	68.6080296204101	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683336	29727707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.5	chr7	+	7290	11	NNC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	94.3411363086114	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683344	29727707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29707938_29708011_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.7	chr7	+	3875	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	-30	-167	combination_of_known_junctions	FALSE	canonical	3	169	junction_6	29.7138617525039	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCCATAGAGAGTGTTAA	NA	False	NA	NA	False	AGTAAA	-19	NA	29683349	29724369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ES.30505.8	chr7	+	5417	11	NNC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.3477591972982	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACGGTCAAGACTCACTT	NA	False	NA	15	True	AATAAA	-18	NA	29683357	29727703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642_29723653_29725433
ES.30505.9	chr7	+	4849	10	NIC	ENSMUSG00000074221.13	novel	6867	9	NA	NA	-21	819	combination_of_known_junctions	FALSE	canonical	3	56	junction_6	59.6777353689417	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTAGTATATTTTCT	NA	False	NA	NA	False	AATATA	-19	NA	29683358	29725355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29683654_29684684_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ES.30506.1	chr7	-	3301	1	Intergenic	novelGene_25163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTTGTCTCGTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	29683317	29680016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29680000_29683300
ES.30507.1	chr7	-	211	1	Intergenic	novelGene_25164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGACACGAAACAATATG	NA	False	NA	NA	False	AAAAAG	-4	NA	29688191	29687980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29688000_29688200
ES.30508.1	chr7	-	350	1	Intergenic	novelGene_25165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAAGATTATTCCAAAG	NA	False	NA	NA	False	NA	NA	NA	29689311	29688961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29689000_29689300
ES.30508.2	chr7	-	205	1	Intergenic	novelGene_25166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTCTAAGACCAAAACT	NA	False	NA	NA	False	NA	NA	NA	29689310	29689105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29689100_29689300
ES.30509.1	chr7	+	137	1	Intergenic	novelGene_25168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	29732009	29732146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29732000_29732100
ES.3051.1	chr10	+	207	1	Intergenic	novelGene_2383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACAACAACCTTGTCCC	1649	False	NA	NA	False	NA	NA	NA	69897191	69897398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_69897200_69897400
ES.30510.1	chr7	+	208	1	Intergenic	novelGene_25169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTTGATCGCCTTGA	NA	False	NA	NA	False	NA	NA	NA	29741361	29741569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29741400_29741600
ES.30511.1	chr7	-	1275	1	ISM	ENSMUSG00000053985.11	ENSMUST00000207873.2	3411	5	13747	0	7101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATGCCCAGATTGGTA	NA	False	NA	NA	False	AATAAA	-40	NA	29737058	29735783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29735800_29737100
ES.30511.2	chr7	-	2788	6	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	-1	-156	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTCTGCATTTATAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	29750806	29736471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
ES.30511.3	chr7	-	1937	6	NIC	ENSMUSG00000053985.11	novel	3411	5	NA	NA	5	168	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAACGTTTAGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	29750793	29737309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
ES.30511.4	chr7	-	160	1	Intergenic	novelGene_25170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29746384	29746224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29746200_29746400
ES.30511.5	chr7	-	175	1	Intergenic	novelGene_25171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	29748361	29748186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29748200_29748400
ES.30512.1	chr7	+	252	1	Intergenic	novelGene_25172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAACATTACATA	NA	False	NA	NA	False	NA	NA	NA	29752195	29752447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29752200_29752400
ES.30513.1	chr7	+	175	1	Intergenic	novelGene_25173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAATATATATATA	NA	False	NA	NA	False	NA	NA	NA	29753655	29753830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29753700_29753800
ES.30514.1	chr7	+	188	1	Intergenic	novelGene_25174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29766370	29766558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29766400_29766600
ES.30515.1	chr7	+	205	1	Intergenic	novelGene_25176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTGAT	4537	False	NA	NA	False	NA	NA	NA	29773183	29773388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29773200_29773400
ES.30516.1	chr7	-	4848	7	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-110	2639	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	48.1756047070391	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGCTGTGTTTCTCT	9930	False	NA	NA	False	NA	NA	NA	29789945	29752819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29780515_29780643_29786524_29786585_29789712
ES.30516.10	chr7	-	2317	8	NNC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.462155846773	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTCCACTGTGTCCC	NA	False	NA	NA	False	ATTAAA	-16	NA	29772296	29755460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29756945_29760583_29760745_29761653_29761747_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
ES.30516.12	chr7	-	2489	9	FSM	ENSMUSG00000058447.9	ENSMUST00000182746.2	2374	9	-119	4	-119	-4	multi-exon	FALSE	canonical	3	5	junction_6	43.1955943934101	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTTCCACTGTGTC	9921	False	NA	NA	False	ATTAAA	-14	NA	29789954	29755462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29780515_29780643_29786524_29786585_29789712
ES.30516.13	chr7	-	2093	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGTTCCACTGTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	29772349	29755462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
ES.30516.14	chr7	-	176	1	Intergenic	novelGene_25175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	29766870	29766694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29766700_29766900
ES.30516.15	chr7	-	1722	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	11	-24	11	24	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTCGTTCTTTCCTT	9934	False	NA	26	True	NA	NA	NA	29789941	29776737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ES.30516.16	chr7	-	4148	3	NNC	ENSMUSG00000078768.3	novel	382	3	NA	NA	35	-2	intron_retention	FALSE	canonical	0	0	junction_2	62.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTGTGTGGCAGTGT	9872	False	NA	0	True	AAAACA	-20	NA	29789853	29776763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29780643_29786524_29786585_29789644
ES.30516.17	chr7	-	1898	5	NNC	ENSMUSG00000078768.3	novel	1709	4	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.5910935959338	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATCTGTGTGGCAGTG	9953	False	NA	-1	True	AAAACA	-19	NA	29789922	29776764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29778044_29780515_29780643_29782173_29782396_29786524_29786585_29789712
ES.30516.18	chr7	-	4161	3	FSM	ENSMUSG00000078768.3	ENSMUST00000182248.2	382	3	-47	-3732	17	-3	multi-exon	FALSE	canonical	3	124	junction_2	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAATCTGTGTGGCAGTG	9940	False	NA	-1	True	AAAACA	-19	NA	29789935	29776764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29780643_29786524_29786585_29789712
ES.30516.2	chr7	-	4678	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	30	1090	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTGTTGCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	29772295	29752823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
ES.30516.3	chr7	-	3213	6	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	-1	-406	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	15.0332963783729	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCTATTATAGTACTTT	NA	False	NA	NA	False	AATAAA	-33	NA	29772326	29754319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29772205
ES.30516.4	chr7	-	3008	5	NIC	ENSMUSG00000098022.8	novel	2181	7	NA	NA	22	-424	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	15.8804124631572	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCCTATTTTTAAAATC	NA	False	NA	NA	False	AATAAA	-15	NA	29772303	29754337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29772205
ES.30516.5	chr7	-	2932	7	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	-87	746	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	48.1756047070391	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTTTGCTTTTGTTCT	9953	False	NA	NA	False	NA	NA	NA	29789922	29754712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29780515_29780643_29786524_29786585_29789712
ES.30516.6	chr7	-	2013	6	NIC	ENSMUSG00000058447.9	novel	2374	9	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.9814514177281	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACTGTGTCCCAGTCTG	9890	False	NA	NA	False	ATTAAA	-22	NA	29789835	29755454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29756945_29765665_29765793_29767489_29767576_29780515_29780643_29786524_29786585_29789712
ES.30517.1	chr7	+	4524	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	-517	-1	-500	1	multi-exon	FALSE	canonical	3	89	junction_1	24	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTGTTTTCCTTTTG	9708	False	NA	14	True	NA	NA	NA	29793701	29807048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794637_29798952_29799148_29803654
ES.30517.10	chr7	+	1654	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	393	1959	2	904	multi-exon	FALSE	canonical	3	89	junction_1	24	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGGGAAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	29794611	29805088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794637_29798952_29799148_29803654
ES.30517.11	chr7	+	6257	3	NNC	ENSMUSG00000049421.14	novel	363	3	NA	NA	1459	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	68.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTGTTGTTTTCCTTT	NA	False	NA	12	True	NA	NA	NA	29796068	29807046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29796218_29796431_29799148_29803654
ES.30517.2	chr7	+	3415	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	-2	593	-2	-585	multi-exon	FALSE	canonical	3	89	junction_1	24	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGCATCGTTTATGGG	NA	False	NA	NA	False	AATAAA	-20	NA	29794216	29806454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794637_29798952_29799148_29803654
ES.30517.3	chr7	+	3074	3	FSM	ENSMUSG00000049421.14	ENSMUST00000123095.8	363	3	19	-2730	2	-593	multi-exon	FALSE	canonical	1	1	junction_1	68	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGTACTAAGCATCG	NA	False	NA	NA	False	AATAAA	-12	NA	29794220	29806446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794308_29798952_29799148_29803654
ES.30517.4	chr7	+	3652	3	FSM	ENSMUSG00000049421.14	ENSMUST00000123095.8	363	3	39	-3328	22	0	multi-exon	FALSE	canonical	1	1	junction_1	68	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTTTGTTGTTTTCCT	NA	False	NA	10	True	NA	NA	NA	29794240	29807044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794308_29798952_29799148_29803654
ES.30517.5	chr7	+	3589	3	NNC	ENSMUSG00000049421.14	novel	594	4	NA	NA	-40	0	intron_retention	FALSE	canonical	1	1	junction_1	68	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCCTTTGTTGTTTTCCT	NA	False	NA	10	True	NA	NA	NA	29794546	29807044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29794637_29799038_29799148_29803654
ES.30517.6	chr7	+	3638	3	NNC	ENSMUSG00000049421.14	novel	4006	3	NA	NA	-18	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	44.5	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGATCCTTTGTTGT	NA	False	NA	4	True	NA	NA	NA	29794568	29807038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29794637_29798952_29799139_29803654
ES.30517.7	chr7	+	3582	3	NNC	ENSMUSG00000049421.14	novel	4006	3	NA	NA	-1	1	intron_retention	FALSE	canonical	2	2	junction_1	67.5	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTTGTTGTTTTCCTT	NA	False	NA	11	True	NA	NA	NA	29794592	29807045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29794637_29799000_29799148_29803654
ES.30517.8	chr7	+	3742	4	NNC	ENSMUSG00000049421.14	novel	3604	3	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	41.9550023504018	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGATCCTTTGTTGTT	NA	False	NA	5	True	NA	NA	NA	29794594	29807039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29794637_29798952_29799148_29803027_29803151_29803657
ES.30517.9	chr7	+	3418	2	FSM	ENSMUSG00000049421.14	ENSMUST00000130526.2	573	2	16	-2861	0	1	multi-exon	FALSE	canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTTGTTGTTTTCCTT	NA	False	NA	11	True	NA	NA	NA	29794609	29807045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29794637_29803654
ES.30518.1	chr7	-	4196	1	FSM	ENSMUSG00002076246.1	ENSMUST00020183502.1	96	1	-4075	-25	-4075	25	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAATAGTTTTAATAA	NA	False	NA	NA	False	NA	NA	NA	29804435	29800239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29800200_29804400
ES.30519.1	chr7	+	4090	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	-139	-1834	-139	1834	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTATGAGGTTTACTG	5120	False	NA	NA	False	NA	NA	NA	29821227	29836209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ES.30519.10	chr7	+	2362	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	11	-256	11	256	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGATTGTTACTATAT	5270	False	NA	NA	False	TATAAA	-11	NA	29821377	29834631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ES.30519.11	chr7	+	2551	6	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-7	5796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.91758912354	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCTAAGACAAACT	5280	False	NA	16	True	AATAAA	-13	NA	29821387	29840171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690_29834162_29839499
ES.30519.12	chr7	+	587	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	21	1509	-7	-104	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATCTCAGAATTCAT	5280	False	NA	NA	False	TATAAA	-19	NA	29821387	29832866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ES.30519.14	chr7	+	2640	7	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-5	5797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.5909559632897	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTCTAAGACAAACTC	5282	False	NA	17	True	AATAAA	-14	NA	29821389	29840172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29829480_29829569_29830125_29830253_29830956_29831050_29832690_29834164_29839499
ES.30519.16	chr7	+	4237	4	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-3	2222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5134350376268	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCTGTGTGCCATAGC	5284	False	NA	NA	False	ATTAAA	-40	NA	29821391	29836597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29830125_29830253_29830956_29831050_29832690
ES.30519.17	chr7	+	2492	4	NIC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	10	-291	intron_retention	FALSE	canonical	3	29	junction_3	8.99382504215469	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGTGGTGTGCTTTTT	5297	False	NA	NA	False	NA	NA	NA	29821404	29834084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29821502_29825192_29825267_29830125_29831050_29832687
ES.30519.18	chr7	+	5834	3	ISM	ENSMUSG00000074220.11	ENSMUST00000156543.2	730	4	5110	-5355	5110	3950	3prime_fragment	FALSE	canonical	3	29	junction_2	4.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGAACCTCTCTTGTGAG	NA	False	NA	NA	False	AATGAA	-15	NA	29830149	29838325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_29830253_29830956_29831050_29832687
ES.30519.2	chr7	+	3091	4	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-17	256	intron_retention	FALSE	canonical	3	19	junction_3	13.1993265821489	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGATTGTTACTATAT	5242	False	NA	NA	False	TATAAA	-11	NA	29821349	29834631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830125_29831050_29832690
ES.30519.3	chr7	+	7934	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-15	5805	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACAAACTCGATTTTTC	5244	False	NA	25	True	AATAAA	-22	NA	29821351	29840180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
ES.30519.4	chr7	+	6443	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	-2	4327	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCTAGAGTTTTGTTT	5257	False	NA	NA	False	NA	NA	NA	29821364	29838702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
ES.30519.6	chr7	+	7378	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	5	-5266	5	5266	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTCCCATGTGACCCT	5264	False	NA	NA	False	AATAAA	-16	NA	29821371	29839641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ES.30519.7	chr7	+	3969	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	7	1834	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	12.6959639255946	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTATGAGGTTTACTG	5266	False	NA	NA	False	NA	NA	NA	29821373	29836209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830097_29830253_29830956_29831050_29832690
ES.30519.8	chr7	+	2391	5	NIC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	8	254	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	10.5445483544816	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGGATTGTTACTAT	5267	False	NA	NA	False	TATAAA	-9	NA	29821374	29834629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29821502_29825192_29825267_29830097_29830253_29830956_29831050_29832687
ES.30519.9	chr7	+	4325	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	11	2222	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCTGTGTGCCATAGC	5270	False	NA	NA	False	ATTAAA	-40	NA	29821377	29836597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
ES.3052.1	chr10	+	5209	10	NNC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	-287	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.16649831495237	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCGTCCTTTCTGTT	6682	False	NA	26	True	AATAAA	-37	NA	69932663	70029047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69932704_69933309_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ES.3052.2	chr10	+	5801	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	-285	-5	-285	5	multi-exon	FALSE	canonical	3	18	junction_3	4.1514304763539	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGTCAAATTTGTTTC	6684	False	NA	14	True	AATAAA	-25	NA	69932665	70029035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ES.3052.4	chr10	+	5395	10	NNC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	-192	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.16649831495237	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTCCTGGAACTGTCAAA	6777	False	NA	6	True	AATAAA	-17	NA	69932758	70029027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69932925_69933229_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ES.3052.6	chr10	+	1642	9	NIC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_8	7.81724855687728	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAAATG	6963	False	NA	NA	False	NA	NA	NA	69932944	70024004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70023756
ES.3052.7	chr10	+	5069	10	NNC	ENSMUSG00000048701.14	novel	5511	9	NA	NA	337	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.16649831495237	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGGAACTGTCAAAT	7306	False	NA	7	True	AATAAA	-18	NA	69933287	70029028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907_70025221_70025323
ES.30520.1	chr7	+	4387	5	Genic_Genomic	ENSMUSG00000108926.2	novel	1088	1	NA	NA	-8094	1918	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCCATTTCAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	29843171	29854271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_29843493_29844194_29844280_29845202_29845351_29846613_29846863_29850687
ES.30520.2	chr7	+	213	1	Intergenic	novelGene_25177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTTTCGAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	29843803	29844016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29843800_29844000
ES.30521.1	chr7	+	5176	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	-58	-1	-58	1	multi-exon	FALSE	canonical	3	26	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTTTCTCACGCGTGTGT	9131	False	NA	NA	False	NA	NA	NA	29869241	29881750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29869640_29875275_29875372_29877068
ES.30521.2	chr7	+	399	4	Fusion	ENSMUSG00000066647.9_ENSMUSG00000074218.4	novel	5117	3	NA	NA	2	-2	multi-exon	FALSE	canonical	0	0	junction_1	526.251101872692	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGCTCCAGCCTGTGT	9191	False	NA	22	True	AATAAA	-23	NA	29869301	29885453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_29869412_29884509_29884597_29884699_29884785_29885336
ES.30521.3	chr7	+	5235	4	NNC	ENSMUSG00000066647.9	novel	5117	3	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.142135623731	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGATCCGGTTTCTCACG	9221	False	NA	NA	False	NA	NA	NA	29869331	29881743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29869640_29875275_29875372_29875742_29875899_29877068
ES.30521.4	chr7	+	1494	5	Fusion	ENSMUSG00000066647.9_ENSMUSG00000074218.4	novel	5117	3	NA	NA	266	-8	intron_retention	FALSE	canonical	0	0	junction_3	403.010778391844	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAACCCGGCTCCAGC	9455	False	NA	16	True	AATAAA	-17	NA	29869565	29885447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_29869640_29875275_29875372_29877068_29878007_29884509_29884785_29885336
ES.30521.5	chr7	+	397	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	0	-4	0	4	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGCCTGTGTGTCTCT	5674	False	NA	28	True	AATAAA	-29	NA	29883568	29885459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
ES.30521.6	chr7	+	439	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	-4	50	-4	-2	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGCTCCAGCCTGTGT	5720	False	NA	22	True	AATAAA	-23	NA	29883614	29885453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
ES.30521.7	chr7	+	1732	2	NIC	ENSMUSG00000074218.4	novel	485	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1230	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGCTCCAGCCTGTGT	5724	False	NA	22	True	AATAAA	-23	NA	29883618	29885453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29884597_29884699
ES.30521.8	chr7	+	328	4	NNC	ENSMUSG00000074218.4	novel	393	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	522.323867176508	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGGCTCCAGCCTGTGT	5728	False	NA	22	True	AATAAA	-23	NA	29883622	29885453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29883671_29884509_29884597_29884699_29884785_29885345
ES.30522.1	chr7	-	1094	5	NNC	ENSMUSG00000037029.9	novel	585	3	NA	NA	14	8317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.0908022893437	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCACATCCCTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	29869138	29852376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29853067_29858863_29858943_29859455_29859583_29862510_29862654_29869083
ES.30522.2	chr7	-	2950	2	NIC	ENSMUSG00000037029.9	novel	585	3	NA	NA	5	781	intron_retention	FALSE	canonical	3	14	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATCCTTCTTTAT	NA	False	NA	0	True	ATTAAA	-18	NA	29869147	29859912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29862799_29869083
ES.30522.3	chr7	-	2909	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	-99	-781	-76	781	multi-exon	FALSE	canonical	3	29	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATCCTTCTTTAT	NA	False	NA	0	True	ATTAAA	-18	NA	29869251	29859912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29862654_29869083
ES.30522.4	chr7	-	2847	3	NNC	ENSMUSG00000037029.9	novel	585	3	NA	NA	4	780	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	5.5	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869148	29859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29862649_29862751_29862799_29869083
ES.30522.5	chr7	-	2797	2	NNC	ENSMUSG00000037029.9	novel	2029	2	NA	NA	5	780	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869147	29859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29862654_29869090
ES.30522.6	chr7	-	9258	1	FSM	ENSMUSG00000037029.9	ENSMUST00000208923.2	1263	1	3	-7998	3	779	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTAAATCCTTCTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	29869172	29859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29859900_29869200
ES.30522.7	chr7	-	2850	3	NNC	ENSMUSG00000037029.9	novel	585	3	NA	NA	-5	776	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0.5	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATTCTTAAATCCTTC	NA	False	NA	-5	True	ATTAAA	-13	NA	29869157	29859917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29862654_29862751_29862799_29869090
ES.30522.8	chr7	-	2053	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	4	-28	4	28	multi-exon	FALSE	canonical	3	29	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGGTTGACTTTGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	29869148	29860665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29862654_29869083
ES.30523.1	chr7	-	3712	1	Antisense	novelGene_ENSMUSG00000066647.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAAGCAGCATGGCCA	NA	False	NA	NA	False	NA	NA	NA	29882335	29878623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_29878600_29882300
ES.30524.1	chr7	+	2624	2	Antisense	novelGene_ENSMUSG00000001794.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTCAGCCATACAAGTC	8682	False	NA	NA	False	NA	NA	NA	29886576	29889337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29886959_29887095
ES.30524.2	chr7	+	178	1	Intergenic	novelGene_25178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29888818	29888996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29888800_29889000
ES.30525.1	chr7	-	1662	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	-43	-19	-43	13	multi-exon	FALSE	canonical	3	37	junction_11	486.143841584714	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGTGTATGTGTAGA	8266	False	NA	11	True	NA	NA	NA	29898279	29886347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ES.30525.10	chr7	-	1432	11	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	504.159587829092	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29894482	29886367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891592_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ES.30525.11	chr7	-	1285	9	NIC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	47	0	intron_retention	FALSE	canonical	3	41	junction_8	516.439493067678	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29892484	29886367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891803_29891927_29892018_29892291_29892326_29892454
ES.30525.12	chr7	-	1559	10	NIC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	766	junction_9	294.003401340869	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTAACTTGGTTATT	NA	False	NA	-10	True	NA	NA	NA	29894479	29886368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29892018_29892291_29892326_29893302_29893527_29894430
ES.30525.13	chr7	-	1175	10	NNC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	646.893793637652	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTAACTTGGTTATT	NA	False	NA	-10	True	NA	NA	NA	29892490	29886368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891640_29891740_29891803_29891927_29892018_29892291_29892326_29892468
ES.30525.14	chr7	-	1539	10	NNC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	-68	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	503.015965679416	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTATAGAGTAACTTGGT	NA	False	NA	-14	True	NA	NA	NA	29893274	29886372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892892
ES.30525.15	chr7	-	1229	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	4	-41	4	-6	multi-exon	FALSE	canonical	3	41	junction_9	490.288577155219	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	False	NA	13	True	NA	NA	NA	29892527	29886373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
ES.30525.16	chr7	-	2801	7	NNC	ENSMUSG00000001794.14	novel	1192	10	NA	NA	-245	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	589.724064476109	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	False	NA	13	True	NA	NA	NA	29893451	29886373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889660_29889825_29890153_29891586_29891652_29891744_29891803_29891927
ES.30525.17	chr7	-	1424	10	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	539.637281015432	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	False	NA	13	True	NA	NA	NA	29894483	29886373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29893277_29893527_29894430
ES.30525.19	chr7	-	1524	11	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	516.151925308818	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	False	NA	13	True	NA	NA	NA	29894482	29886373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892110_29892291_29892326_29893302_29893527_29894430
ES.30525.2	chr7	-	2599	11	NIC	ENSMUSG00000001794.14	novel	1600	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	37	junction_10	504.732453880271	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	8293	False	NA	-2	True	NA	NA	NA	29898252	29886360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29893527_29894430_29894590_29898182
ES.30525.20	chr7	-	1442	10	NNC	ENSMUSG00000001794.14	novel	1157	10	NA	NA	225	-8	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	659.928073147669	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTCTATAGAGTAACTT	NA	False	NA	11	True	NA	NA	NA	29892981	29886375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889498_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892671
ES.30525.21	chr7	-	1721	10	FSM	ENSMUSG00000001794.14	ENSMUST00000129761.8	1157	10	-32	-532	-32	-8	multi-exon	FALSE	canonical	3	18	junction_9	497.427331996628	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTCTATAGAGTAACTT	NA	False	NA	11	True	NA	NA	NA	29893238	29886375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892671
ES.30525.22	chr7	-	475	2	NNC	ENSMUSG00000001794.14	novel	600	3	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTCTGAGTGCTGAGTC	NA	False	NA	-25	True	AATAAA	-24	NA	29894509	29886411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886863_29894485
ES.30525.24	chr7	-	1196	11	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	510.344442509174	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	False	NA	-28	True	AATAAA	-21	NA	29894483	29886414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886763_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ES.30525.26	chr7	-	1529	9	NNC	ENSMUSG00000001794.14	novel	1241	9	NA	NA	106	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	532.570989986312	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCCTTCGGACTCTGA	NA	False	NA	-35	True	AATAAA	-14	NA	29893100	29886421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892645
ES.30525.27	chr7	-	1060	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	-19	388	-19	152	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGAGTTACCCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	29894492	29886755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ES.30525.28	chr7	-	2202	2	NIC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-226	2717	intron_retention	FALSE	canonical	3	1106	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGGGAGAATGG	NA	False	NA	NA	False	NA	NA	NA	29893432	29890253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29892326_29893302
ES.30525.29	chr7	-	2131	1	NIC	ENSMUSG00000001794.14	novel	1600	12	NA	NA	-23	2681	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	29892420	29890289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29890300_29892400
ES.30525.4	chr7	-	1643	9	NIC	ENSMUSG00000001794.14	novel	1157	10	NA	NA	183	-3	intron_retention	FALSE	canonical	3	18	junction_8	527.016603154018	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTTGGTTATTTTTTT	NA	False	NA	-5	True	NA	NA	NA	29893023	29886363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29892018_29892291_29892326_29892671
ES.30525.5	chr7	-	1380	12	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	495.080943377815	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29894482	29886367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886691_29886748_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ES.30525.8	chr7	-	1252	10	NNC	ENSMUSG00000001794.14	novel	1429	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_9	479.120258622219	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29892558	29886367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892468
ES.30525.9	chr7	-	1638	12	NNC	ENSMUSG00000001794.14	novel	1600	12	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	609.523970877586	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	8248	False	NA	-9	True	NA	NA	NA	29898297	29886367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29886959_29887095_29887155_29889498_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ES.30526.1	chr7	+	176	1	Intergenic	novelGene_25179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAATTTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	29901575	29901751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29901600_29901800
ES.30527.1	chr7	-	180	1	Intergenic	novelGene_25180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAAAAGATTT	4602	False	NA	NA	False	NA	NA	NA	29901943	29901763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29901800_29901900
ES.30528.1	chr7	-	108	1	Intergenic	novelGene_25181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAATTATTTAT	2587	False	NA	NA	False	AATAAA	-20	NA	29903958	29903850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29903800_29904000
ES.30529.1	chr7	+	184	1	Intergenic	novelGene_25182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTTTCCCAGA	NA	False	NA	NA	False	NA	NA	NA	29906037	29906221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29906000_29906200
ES.30529.2	chr7	+	284	1	Intergenic	novelGene_25183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAAAACAGATAATCAGG	NA	False	NA	NA	False	NA	NA	NA	29906039	29906323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29906000_29906300
ES.3053.1	chr10	-	2143	1	Intergenic	novelGene_2384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69940958	69938815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69938800_69941000
ES.30530.1	chr7	+	216	1	Intergenic	novelGene_25184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTGTTCCCCTAAGA	NA	False	NA	NA	False	NA	NA	NA	29907608	29907824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29907600_29907800
ES.30531.1	chr7	+	177	1	Intergenic	novelGene_25185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTCA	6402	False	NA	NA	False	NA	NA	NA	29914934	29915111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29914900_29915100
ES.30532.1	chr7	+	244	1	Intergenic	novelGene_25187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACATGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	29927979	29928223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29928000_29928200
ES.30532.10	chr7	+	536	5	NIC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	1146	junction_4	33.3391661563393	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTCCCGTGTTTATTT	NA	False	NA	17	True	AATAAA	-17	NA	29931739	29932814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932544_29932709
ES.30532.11	chr7	+	524	5	FSM	ENSMUSG00000019738.16	ENSMUST00000108192.2	508	5	-16	0	-16	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.0672063403024	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931740	29932811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30532.13	chr7	+	412	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	483.658309139831	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931753	29932811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29931830_29931928_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30532.14	chr7	+	4030	26	Intergenic	novelGene_25188	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATTCCAAGGCA	260	False	NA	NA	False	NA	NA	NA	29941820	29977249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29941964_29942176_29942567_29942855_29942959_29943256_29943334_29944713_29944935_29947043_29947094_29949203_29949337_29950099_29950226_29950816_29950881_29950957_29951068_29951738_29951816_29953406_29953529_29953609_29953682_29955232_29955358_29957482_29957572_29960711_29960894_29962038_29962169_29964500_29964697_29967203_29967374_29969579_29969755_29970101_29970242_29971031_29971203_29971751_29971809_29973371_29973434_29974524_29974618_29976497
ES.30532.15	chr7	+	178	1	Intergenic	novelGene_25189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTATTGTTGTTTTG	221	False	NA	NA	False	NA	NA	NA	29944216	29944394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29944200_29944400
ES.30532.16	chr7	+	6720	4	Antisense	novelGene_ENSMUSG00000037020.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACTAATAGCATTCCT	NA	False	NA	NA	False	NA	NA	NA	29969047	29978658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29971809_29973371_29973434_29974524_29977021_29977257
ES.30532.17	chr7	+	2134	1	Intergenic	novelGene_25190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTCCAAGGCACTTT	NA	False	NA	NA	False	NA	NA	NA	29975119	29977253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_29975100_29977300
ES.30532.2	chr7	+	178	2	Antisense	novelGene_ENSMUSG00000037020.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTATTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	29927987	29944394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_29928123_29944351
ES.30532.3	chr7	+	876	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	-58	1	-58	-1	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTCCCGTGTTTATTT	NA	False	NA	17	True	AATAAA	-17	NA	29931314	29932814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30532.4	chr7	+	947	5	FSM	ENSMUSG00000019738.16	ENSMUST00000138118.8	435	5	-451	-61	-49	0	multi-exon	FALSE	canonical	3	1146	junction_4	46.6717259162333	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931323	29932811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_29931830_29931906_29931962_29932174_29932407_29932491_29932544_29932709
ES.30532.6	chr7	+	600	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	483.259764515938	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCCGTGTTTATTTCT	NA	False	NA	19	True	AATAAA	-19	NA	29931333	29932816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29931571_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30532.7	chr7	+	812	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	484.853957393358	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTCCCGTGTTTATT	NA	False	NA	16	True	AATAAA	-16	NA	29931335	29932813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29931788_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30532.8	chr7	+	800	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_1	476.08637871714	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931365	29932811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_29931808_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ES.30533.1	chr7	-	879	6	NNC	ENSMUSG00000006095.13	novel	1416	6	NA	NA	761	2	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_5	340.493759120487	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTCTTGATTCCAG	NA	False	NA	-3	True	NA	NA	NA	29930936	29923553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29930782
ES.30533.2	chr7	-	1442	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	-25	-1	-25	1	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAAGTCTCTTGATTCCA	NA	False	NA	-4	True	NA	NA	NA	29931722	29923554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ES.30533.3	chr7	-	1037	5	NIC	ENSMUSG00000006095.13	novel	1416	6	NA	NA	505	1	intron_retention	FALSE	canonical	3	839	junction_3	28.6400069832394	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAAGTCTCTTGATTCCA	NA	False	NA	-4	True	NA	NA	NA	29931192	29923554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ES.30533.4	chr7	-	939	6	NIC	ENSMUSG00000006095.13	novel	1416	6	NA	NA	428	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_2	312.712391823541	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	False	NA	-5	True	NA	NA	NA	29931269	29923555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29923773_29923897_29923971_29926317_29926461_29927028_29927126_29930550_29930695_29931004
ES.30533.6	chr7	-	175	1	Intergenic	novelGene_25186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29924979	29924804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_29924800_29925000
ES.30534.1	chr7	-	2590	5	NNC	ENSMUSG00000100512.2	novel	731	5	NA	NA	-2180	54	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTGGCATTTATTACA	6422	False	NA	NA	False	AATAAA	-19	NA	29937330	29932809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29933073_29933759_29934712_29934790_29935379_29936199_29936299_29936642
ES.30535.1	chr7	-	4453	31	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	42.5744315548924	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTCTATAAAGCCCTTC	NA	False	NA	0	True	AATAAA	-25	NA	29979845	29939558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.10	chr7	-	4689	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	46.4306859065209	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979845	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.100	chr7	-	6433	30	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-6	0	intron_retention	FALSE	canonical	1	12	junction_9	48.4187294860327	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979827	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.101	chr7	-	6808	31	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	intron_retention	FALSE	canonical	1	7	junction_22	41.6379100767024	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979835	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.102	chr7	-	5973	31	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_16	41.5986244430697	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979834	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953412_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.103	chr7	-	4824	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	49.2242483938122	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979834	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29970680_29970787_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.104	chr7	-	3921	25	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-5266	0	intron_retention	FALSE	canonical	1	7	junction_23	44.807845915147	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29967338	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206
ES.30535.105	chr7	-	4496	31	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	54.0978126483256	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979837	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29943257_29943332_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960713_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.106	chr7	-	5092	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2	0	intron_retention	FALSE	canonical	1	12	junction_11	46.4734046928994	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979846	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.108	chr7	-	7391	29	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	12	0	intron_retention	FALSE	canonical	1	41	junction_18	30.1168430399648	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979809	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.109	chr7	-	4739	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	41.710486072899	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979834	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953700_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.11	chr7	-	6049	31	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	26	0	intron_retention	FALSE	canonical	1	7	junction_22	42.3159544380131	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979795	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29944931_29947040_29947094_29949203_29949338_29950102_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.111	chr7	-	3603	25	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	58.358744465209	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	3478	False	NA	-9	True	AATAAA	-16	NA	29962163	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036
ES.30535.112	chr7	-	5002	35	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	61.7508177663235	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979833	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29940485_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.113	chr7	-	3726	17	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2172	0	intron_retention	FALSE	canonical	0	0	junction_4	64.1840310649775	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	597	False	NA	-9	True	AATAAA	-16	NA	29953472	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941700_29941822_29941959_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407
ES.30535.114	chr7	-	4710	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_10	43.8059290196393	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979835	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.115	chr7	-	5439	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	0	intron_retention	FALSE	canonical	1	12	junction_11	46.3039803229701	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979846	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.116	chr7	-	5100	31	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	0	intron_retention	FALSE	canonical	1	24	junction_9	39.4652589839046	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCTTCCCTGTCTATA	NA	False	NA	-9	True	AATAAA	-16	NA	29979766	29939567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.117	chr7	-	4635	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	46.5113813356473	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAACCTTCCCTGTCT	NA	False	NA	-12	True	AATAAA	-13	NA	29979766	29939570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.118	chr7	-	4878	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	58.8372800867558	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAACCTTCCCTGTCT	NA	False	NA	-12	True	AATAAA	-13	NA	29979834	29939570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941601_29941700_29941822_29941936_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.119	chr7	-	6065	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	-10	intron_retention	FALSE	canonical	0	0	junction_8	59.0915603110969	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTCCTGGAACCTTC	NA	False	NA	-19	True	AATAAA	-6	NA	29979846	29939577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943050_29943171_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.120	chr7	-	4885	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	11	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	61.7041282981602	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACAGTTGTTTCCTGGAA	NA	False	NA	-24	True	AATAAA	-1	NA	29979833	29939582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29940485_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.121	chr7	-	5509	31	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	-21	intron_retention	FALSE	canonical	1	41	junction_20	30.4559609199177	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGACAGTTGTTTC	NA	False	NA	-30	True	AATAGA	-11	NA	29979845	29939588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.122	chr7	-	7044	29	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-5	-21	intron_retention	FALSE	canonical	1	41	junction_18	31.610028116897	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGACAGTTGTTTC	NA	False	NA	-30	True	AATAGA	-11	NA	29979826	29939588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.123	chr7	-	5107	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	56	-21	intron_retention	FALSE	non_canonical	0	0	junction_21	53.4715733556438	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGACAGTTGTTTC	NA	False	NA	-30	True	AATAGA	-11	NA	29979765	29939588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941601_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960713_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971806_29973372_29973436_29974526_29974619_29979580
ES.30535.124	chr7	-	4561	31	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	13	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	50.3456938465336	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGACAGTTGTTTC	NA	False	NA	-30	True	AATAGA	-11	NA	29979808	29939588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29953407_29953564_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.125	chr7	-	4825	1	NIC	ENSMUSG00000037020.17	novel	3245	23	NA	NA	-1438	1333	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1331	False	NA	NA	False	NA	NA	NA	29952738	29947913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29947900_29952700
ES.30535.126	chr7	-	2617	13	ISM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	0	14905	0	-5221	5prime_fragment	FALSE	canonical	1	41	junction_2	40.4621736934634	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGTGGAAGAGGCAGAC	NA	False	NA	NA	False	AATGAA	-43	NA	29979844	29954467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.127	chr7	-	3412	1	NIC	ENSMUSG00000037020.17	novel	3245	23	NA	NA	4167	-5247	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7736	False	NA	NA	False	AATGAA	-17	NA	29957905	29954493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29954500_29957900
ES.30535.128	chr7	-	4918	3	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-4279	-8605	intron_retention	FALSE	canonical	1	1	junction_2	80	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTGTGAATATGGCCT	NA	False	NA	NA	False	NA	NA	NA	29966351	29957851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29962175_29964506_29964697_29965946
ES.30535.13	chr7	-	4696	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.320394480208	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979846	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941214_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.14	chr7	-	5404	31	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	0	intron_retention	FALSE	canonical	1	41	junction_20	30.6225951436735	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.15	chr7	-	7834	24	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	60	0	intron_retention	FALSE	canonical	1	41	junction_13	32.4368806874745	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979761	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941700_29941822_29941938_29942170_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29950881_29950957_29951070_29951740_29951817_29953407_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.16	chr7	-	5695	31	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	53.9153245582573	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944716_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.17	chr7	-	6022	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_2	65.0400340973143	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979835	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941249_29941438_29941491_29941601_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943148_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.18	chr7	-	5598	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	9	0	intron_retention	FALSE	canonical	1	12	junction_10	46.775261389368	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979835	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.19	chr7	-	4838	33	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_7	45.2368765500007	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.2	chr7	-	4738	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	30.5222607032556	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGTCTATAAAGCCCTT	NA	False	NA	-1	True	AATAAA	-24	NA	29979846	29939559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.20	chr7	-	5973	30	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	0	intron_retention	FALSE	canonical	1	41	junction_19	36.7426050378886	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.21	chr7	-	4603	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	41.4206109748224	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.22	chr7	-	4996	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	11	0	intron_retention	FALSE	canonical	1	12	junction_12	46.662183564424	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979833	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.23	chr7	-	4744	33	FSM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	-2	0	-2	0	multi-exon	FALSE	canonical	1	9	junction_7	40.394139716517	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979846	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.24	chr7	-	5837	30	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	0	intron_retention	FALSE	canonical	1	2	junction_27	54.8203855605588	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29973372_29973436_29974526_29974619_29979580
ES.30535.25	chr7	-	5524	31	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	11	0	intron_retention	FALSE	canonical	1	41	junction_20	36.756616940204	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979833	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.26	chr7	-	4751	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	41.7610389597768	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.27	chr7	-	4668	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_10	39.0660477577263	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979845	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.28	chr7	-	4792	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.188893697392	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943148_29943171_29943257_29943386_29943897_29944015_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967339_29969573_29969757_29970680_29970787_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.29	chr7	-	5039	35	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	59.6462756648899	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979834	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29940485_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.3	chr7	-	4793	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	36.4423774608628	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGTCTATAAAGCCCT	NA	False	NA	-2	True	AATAAA	-23	NA	29979845	29939560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.33	chr7	-	6613	29	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	0	intron_retention	FALSE	canonical	1	41	junction_18	30.5594727956982	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979766	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.34	chr7	-	5741	30	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	12	0	intron_retention	FALSE	canonical	1	41	junction_19	30.6037153946575	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979809	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29942303_29942467_29942567_29942855_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.35	chr7	-	4778	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.4844909416071	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979835	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.36	chr7	-	8058	29	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	26	-1	intron_retention	FALSE	canonical	1	41	junction_18	36.794156451529	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCCCTGTCTATAAAGC	NA	False	NA	-5	True	AATAAA	-20	NA	29979795	29939563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.37	chr7	-	6134	30	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	56	-2	intron_retention	FALSE	canonical	1	41	junction_19	36.9501705147643	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979765	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.38	chr7	-	4629	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	47.2246852656267	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979835	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941214_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.39	chr7	-	4697	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	47.2511389838992	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.40	chr7	-	4918	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_12	46.0027148158844	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.41	chr7	-	3021	20	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2130	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	63.2781749406754	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	639	False	NA	-6	True	AATAAA	-19	NA	29953430	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407
ES.30535.42	chr7	-	4732	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.7610389597768	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979824	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941959_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.43	chr7	-	4573	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.8584051280692	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979845	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941214_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.44	chr7	-	2615	5	NIC	ENSMUSG00000037020.17	novel	3245	23	NA	NA	-1043	-2	intron_retention	FALSE	canonical	3	128	junction_2	30.797727188869	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	1006	False	NA	-6	True	AATAAA	-19	NA	29942746	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941700_29941822_29942303_29942467
ES.30535.45	chr7	-	5251	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	7	junction_23	41.0566472454644	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979826	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.46	chr7	-	4725	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	46.8337735373736	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.47	chr7	-	5014	19	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-3249	-2	intron_retention	FALSE	canonical	3	8	junction_2	59.7648684945666	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29954549	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610
ES.30535.48	chr7	-	4889	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	59.7974445524221	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953541_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.49	chr7	-	5514	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	42.3947555313871	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.5	chr7	-	6854	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	60	1	intron_retention	FALSE	canonical	1	6	junction_2	56.6612512970123	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTGTCTATAAAGCCC	NA	False	NA	-3	True	AATAAA	-22	NA	29979761	29939561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.50	chr7	-	3997	26	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-4270	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	45.0083725544481	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29966342	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29965946
ES.30535.51	chr7	-	5612	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	27	-2	intron_retention	FALSE	canonical	1	12	junction_10	50.6032701209149	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979794	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.52	chr7	-	5237	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_22	50.5077239330685	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979820	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.53	chr7	-	4649	27	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-7641	-2	intron_retention	FALSE	canonical	0	0	junction_17	60.0991291571166	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29969713	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951051_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573
ES.30535.54	chr7	-	4125	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	41.6156538225717	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979835	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.55	chr7	-	6946	24	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	6399	-2	intron_retention	FALSE	canonical	1	8	junction_2	45.1010627381819	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29973422	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941295_29941438_29941700_29941822_29942960_29943257_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372
ES.30535.56	chr7	-	4801	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	9	junction_7	44.8182091900156	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979848	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.57	chr7	-	4679	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_10	38.4508107034169	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979846	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.58	chr7	-	5720	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	intron_retention	FALSE	canonical	1	12	junction_10	50.7920614541661	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.59	chr7	-	3405	12	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	2894	-2	intron_retention	FALSE	canonical	3	12	junction_10	59.5548223026829	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	6973	False	NA	-6	True	AATAAA	-19	NA	29947096	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040
ES.30535.6	chr7	-	4104	28	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	53.8690175912038	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979846	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971242_29974514_29974619_29979580
ES.30535.60	chr7	-	6632	27	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	-2	intron_retention	FALSE	non_canonical	0	0	junction_26	43.965222942712	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979766	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29942303_29942467_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979572
ES.30535.61	chr7	-	4655	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	47.2369256878292	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971763_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.62	chr7	-	5456	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	intron_retention	FALSE	canonical	1	7	junction_24	53.0971986078362	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.63	chr7	-	4931	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.8927836264262	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979823	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943382_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.64	chr7	-	5925	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1	junction_3	54.1096124185658	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979845	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941601_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.65	chr7	-	4643	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	49.1648885314308	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	29979834	29939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.66	chr7	-	4840	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	11	2	intron_retention	FALSE	canonical	1	8	junction_3	41.1296521142412	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979833	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.67	chr7	-	4745	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.4310211715769	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979846	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949334_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953490_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.68	chr7	-	4818	31	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	11	2	intron_retention	FALSE	canonical	1	24	junction_9	39.2597617018862	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979833	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.7	chr7	-	3100	23	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	1236	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.5818239404174	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	4805	False	NA	-4	True	AATAAA	-21	NA	29960836	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941936_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943921_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953490_29953610_29953679_29955229_29955356_29957480_29957573_29960712
ES.30535.70	chr7	-	4724	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_10	43.1181946623174	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979835	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.72	chr7	-	5232	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	2	intron_retention	FALSE	canonical	1	41	junction_21	29.9910496534085	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979834	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.73	chr7	-	5289	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	2	intron_retention	FALSE	canonical	1	41	junction_21	36.2757676905681	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979834	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.74	chr7	-	4493	23	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2565	2	intron_retention	FALSE	canonical	1	6	junction_2	55.0899339847697	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	1004	False	NA	-7	True	AATAAA	-18	NA	29964637	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506
ES.30535.75	chr7	-	5201	31	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	2	intron_retention	FALSE	canonical	1	1	junction_2	42.0497588842341	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979834	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941053_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.76	chr7	-	5403	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	41	2	intron_retention	FALSE	non_canonical	0	0	junction_6	53.7223675338076	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979780	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.77	chr7	-	4930	34	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	60.8945256216739	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979766	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941936_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.78	chr7	-	4829	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	51.603934189896	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979824	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29940485_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.79	chr7	-	6749	31	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	2	intron_retention	FALSE	canonical	1	1	junction_4	50.9620774040201	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979834	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941601_29941700_29941822_29941936_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.8	chr7	-	5354	30	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_27	42.0085490421631	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979846	29939562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29973372_29973436_29974526_29974619_29979580
ES.30535.80	chr7	-	4773	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	40.4868685308891	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979845	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.81	chr7	-	4803	16	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-2843	2	intron_retention	FALSE	canonical	2	5	junction_5	44.7881928885529	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29954143	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610
ES.30535.82	chr7	-	4636	34	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.5156312007859	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979835	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943148_29943171_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960765_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.83	chr7	-	5473	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	55	2	intron_retention	FALSE	canonical	1	1	junction_10	52.0436922060445	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979766	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29944015_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.84	chr7	-	5454	31	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	2	intron_retention	FALSE	canonical	1	41	junction_20	36.3335779808277	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTCCCTGTCTATAAA	NA	False	NA	-7	True	AATAAA	-18	NA	29979834	29939565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.85	chr7	-	5327	31	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	56	1	intron_retention	FALSE	canonical	1	41	junction_20	29.7198960668139	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979765	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.86	chr7	-	5483	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	11	1	intron_retention	FALSE	canonical	1	1	junction_3	63.6890563475194	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979833	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941601_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.88	chr7	-	4802	28	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-8123	1	intron_retention	FALSE	canonical	1	5	junction_7	55.7609536379829	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29970195	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942361_29942467_29942567_29942855_29942960_29943257_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103
ES.30535.89	chr7	-	7268	28	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	10	1	intron_retention	FALSE	canonical	1	41	junction_17	30.9971900138015	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979834	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.90	chr7	-	3783	15	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-472	1	intron_retention	FALSE	canonical	3	6	junction_2	44.4609436495008	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	2297	False	NA	-8	True	AATAAA	-17	NA	29951772	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29941253_29941438_29941491_29941569_29941700_29941822_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740
ES.30535.91	chr7	-	4213	30	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_22	36.7685501242596	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979835	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.92	chr7	-	5535	32	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-5	1	intron_retention	FALSE	canonical	1	12	junction_10	52.0669344283878	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979826	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.94	chr7	-	3681	26	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-7601	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_22	38.6439335471947	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29969673	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29962036_29962175_29964506_29964697_29967206_29967368_29969573
ES.30535.95	chr7	-	5500	30	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	10	1	intron_retention	FALSE	canonical	1	41	junction_19	31.1056654917349	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979834	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.96	chr7	-	7307	30	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_2	51.6255382054845	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979819	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29941249_29941438_29941491_29941569_29941700_29941822_29941966_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.97	chr7	-	5341	33	NNC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	9	1	intron_retention	FALSE	canonical	1	6	junction_2	58.5477152495082	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	NA	False	NA	-8	True	AATAAA	-17	NA	29979835	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_29939910_29940002_29940140_29940422_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944114_29944312_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962201_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ES.30535.98	chr7	-	3799	10	NIC	ENSMUSG00000037020.17	novel	4768	33	NA	NA	-186	1	intron_retention	FALSE	canonical	3	129	junction_3	19.6525372973116	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTCCCTGTCTATAA	3893	False	NA	-8	True	AATAAA	-17	NA	29950176	29939566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_29939910_29940002_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102
ES.30536.1	chr7	+	2134	14	NIC	ENSMUSG00000013921.16	novel	3300	14	NA	NA	-39	-154	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	3.75113395084203	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATGCTGACCCTCTCC	7131	False	NA	NA	False	AATAAA	-18	NA	29991113	30006575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29991268_29991579_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ES.30536.2	chr7	+	3348	14	NIC	ENSMUSG00000013921.16	novel	3300	14	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	3.75113395084203	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTCAGGTCACTGG	7134	False	NA	11	True	AATAAA	-16	NA	29991116	30007792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29991268_29991579_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ES.30536.3	chr7	+	2072	14	NIC	ENSMUSG00000013921.16	novel	3300	14	NA	NA	-6	-160	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.87221936881638	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCAAGGGATGCTGACC	7164	False	NA	NA	False	AATAAA	-12	NA	29991146	30006569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29991268_29991602_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ES.30536.4	chr7	+	3285	14	NIC	ENSMUSG00000013921.16	novel	3300	14	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.87221936881638	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGTGTCAGGTCACTG	7173	False	NA	10	True	AATAAA	-15	NA	29991155	30007791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_29991268_29991602_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ES.30537.1	chr7	+	1145	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-33	0	-22	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008179	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
ES.30537.10	chr7	+	1113	6	NNC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	9	junction_2	183.771162046715	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008202	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30008260_30008905_30008976_30009410_30009480_30011264_30011326_30011661_30012133_30013343
ES.30537.11	chr7	+	1005	7	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	165.266451526013	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008202	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011930_30012133_30013343
ES.30537.12	chr7	+	1040	8	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	190.751467750525	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008208	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30012897_30013024_30013343
ES.30537.13	chr7	+	859	6	NNC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	-3	339	intron_retention	FALSE	canonical	0	0	junction_5	179.09371848281	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTGTTTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	30008209	30012460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30012331
ES.30537.14	chr7	+	4597	13	Fusion	ENSMUSG00000042831.14_ENSMUSG00000019737.15	novel	982	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	9	junction_6	155.314465949999	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30008222	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30012897_30013024_30013343_30014512_30014686_30015799_30015997_30016193_30016267_30017468_30018097_30018157_30018248
ES.30537.15	chr7	+	2307	5	ISM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	16	0	-5	0	intron_retention	FALSE	canonical	3	431	junction_1	14.8576579581036	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008228	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661
ES.30537.16	chr7	+	612	4	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	-252	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	224.695843802733	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008943	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008985_30009410_30009480_30012015_30012133_30013343
ES.30537.17	chr7	+	4275	1	FSM	ENSMUSG00002076496.1	ENSMUST00020182059.1	371	1	-1496	-2408	-1496	2408	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30009453	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30009500_30013700
ES.30537.18	chr7	+	2313	6	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	156	junction_2	32.932658562588	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014232	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017468_30018097_30018157_30018248
ES.30537.19	chr7	+	2235	7	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	130	junction_4	40.3460723683924	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014235	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30017468_30018097_30018157_30018248
ES.30537.20	chr7	+	1708	5	ISM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	0	1245	0	451	5prime_fragment	FALSE	canonical	3	130	junction_4	31.7372021451167	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAAGTTTCTCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	30014240	30017226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267
ES.30537.21	chr7	+	1099	7	FSM	ENSMUSG00000019737.15	ENSMUST00000176304.8	1006	7	-99	6	1	0	multi-exon	FALSE	canonical	3	23	junction_4	73.2385751423994	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014241	30018465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30017392_30017468_30018097_30018157_30018248
ES.30537.22	chr7	+	4051	2	FSM	ENSMUSG00000019737.15	ENSMUST00000176965.2	664	2	-53	-3334	2	1	multi-exon	FALSE	canonical	3	217	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAGAATATCAGT	NA	False	NA	8	True	ATTAAA	-15	NA	30014242	30018468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30014512_30014686
ES.30537.23	chr7	+	1276	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014253	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ES.30537.25	chr7	+	2235	5	NNC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_4	82.118816357763	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014256	30018465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30017478_30018248
ES.30537.26	chr7	+	3309	4	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	214	junction_3	15.8394724940223	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGTCTGAGAATATCAG	NA	False	NA	7	True	ATTAAA	-14	NA	30014261	30018467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30017468_30018097_30018157_30018248
ES.30537.27	chr7	+	1377	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	22	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_5	74.7905920090303	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014262	30018465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016567_30017392_30017468_30018097_30018157_30018248
ES.30537.28	chr7	+	1447	7	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	27	0	intron_retention	FALSE	canonical	2	5	junction_4	79.403330464716	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014267	30018465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016567_30017392_30017468_30018097_30018157_30018248
ES.30537.29	chr7	+	2149	7	NNC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	-26	0	intron_retention	FALSE	canonical	2	3	junction_3	96.4722182231179	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014269	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015984_30016193_30016267_30017468_30018097_30018157_30018248
ES.30537.3	chr7	+	960	7	NNC	ENSMUSG00000042831.14	novel	982	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	171.158471079354	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTTGGATTTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	30008188	30013727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011988_30012133_30013343
ES.30537.30	chr7	+	3098	5	NIC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	-18	0	intron_retention	FALSE	canonical	3	175	junction_2	26.2428561707753	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014277	30018471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014512_30014686_30015799_30015997_30017468_30018097_30018157_30018248
ES.30537.31	chr7	+	1322	8	NNC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	75.4707674182122	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014285	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015984_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ES.30537.32	chr7	+	1068	7	NNC	ENSMUSG00000019737.15	novel	1006	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	96.5395716216355	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014290	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015984_30016193_30017392_30017468_30018097_30018157_30018248
ES.30537.33	chr7	+	1194	7	ISM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	330	6	-4	0	3prime_fragment	FALSE	canonical	3	130	junction_3	41.277179597879	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30014570	30018465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ES.30537.34	chr7	+	2065	6	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	6	0	intron_retention	FALSE	canonical	3	130	junction_3	42.1966823340414	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30014580	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30014826_30015654_30015799_30015997_30016193_30016267_30017468_30018097_30018157_30018248
ES.30537.4	chr7	+	1076	5	ISM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	-24	1271	-13	336	5prime_fragment	FALSE	canonical	3	431	junction_1	14.8576579581036	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAACTACTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	30008188	30012457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661
ES.30537.5	chr7	+	1898	4	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	-13	0	intron_retention	FALSE	canonical	3	431	junction_1	31.8468557666565	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008188	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008260_30008905_30009480_30011264_30012133_30013343
ES.30537.6	chr7	+	1559	5	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	431	junction_1	30.0124973969178	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTTGGATTTTTTT	NA	False	NA	7	True	AATAAA	-14	NA	30008190	30013727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008260_30008905_30009480_30011264_30011326_30011661_30012133_30013343
ES.30537.7	chr7	+	2919	12	Fusion	ENSMUSG00000042831.14_ENSMUSG00000019737.15	novel	1355	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	12	junction_1	151.36066063141	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGAGAATATCAGTAC	NA	False	NA	10	True	ATTAAA	-17	NA	30008192	30018470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30008260_30009410_30009480_30011264_30011326_30011661_30012133_30013343_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ES.30537.8	chr7	+	921	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	60	1	0	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008201	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ES.30537.9	chr7	+	1248	7	NIC	ENSMUSG00000042831.14	novel	1112	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_5	204.263446449813	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008202	30013728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30012897_30013024_30013343
ES.30538.1	chr7	+	2125	1	FSM	ENSMUSG00000074210.4	ENSMUST00000098585.4	1733	1	30	-422	30	422	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTATTCCAGTCTGG	NA	False	NA	NA	False	NA	NA	NA	30021194	30023319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30021200_30023300
ES.30539.1	chr7	-	1024	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1461	5	1461	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTGATTCTTT	NA	False	NA	0	True	AATAAA	-31	NA	30021859	30020835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30020800_30021900
ES.3054.1	chr10	-	5574	3	Antisense	novelGene_ENSMUSG00000048701.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTAGCCAGGCTCGTC	NA	False	NA	NA	False	NA	NA	NA	69954316	69947299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_69949165_69950551_69952782_69952837
ES.30540.1	chr7	-	3236	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	-352	2	-352	-2	multi-exon	FALSE	canonical	3	10	junction_2	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCGGGCTGTTCCTTTG	NA	False	NA	NA	False	AAGAAA	-14	NA	30062549	30054915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30055529_30058808_30060240_30061357
ES.30541.1	chr7	+	2009	12	FSM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	4	1	4	0	multi-exon	FALSE	canonical	2	3	junction_1	5.20965410250706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTGTGGTGTCATTAA	NA	False	NA	15	True	ATTAAA	-15	NA	30121160	30128170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
ES.30541.2	chr7	+	2099	11	NIC	ENSMUSG00000036931.16	novel	2014	12	NA	NA	6	-2	intron_retention	FALSE	canonical	2	3	junction_1	5.2687759489278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGTGTGGTGTCATT	NA	False	NA	13	True	ATTAAA	-13	NA	30121162	30128168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125690_30126492_30126610_30126850_30127016_30127558
ES.30541.3	chr7	+	3122	11	FSM	ENSMUSG00000036931.16	ENSMUST00000046177.9	2039	11	-1083	0	-214	0	multi-exon	FALSE	canonical	2	4	junction_9	4.70744091837593	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGGTGTCATTAAA	NA	False	NA	16	True	ATTAAA	-16	NA	30121616	30128171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
ES.30541.4	chr7	+	3489	10	ISM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	635	1	-39	0	intron_retention	FALSE	canonical	2	4	junction_9	4.8635708062754	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTGTGGTGTCATTAA	NA	False	NA	15	True	ATTAAA	-15	NA	30121791	30128170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850
ES.30541.5	chr7	+	2051	12	NNC	ENSMUSG00000036931.16	novel	2000	12	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	5.20965410250706	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTGTGGTGTCATTA	NA	False	NA	14	True	ATTAAA	-14	NA	30121797	30128169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30121940_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
ES.30542.1	chr7	-	1995	3	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATGACCTCAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	30126196	30123332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_30123882_30124649_30125031_30125131
ES.30542.2	chr7	-	2146	1	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTATTATTGTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	30126196	30124050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_30124000_30126200
ES.30542.3	chr7	-	2045	2	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTATTATTGTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	30126196	30124050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_30125031_30125131
ES.30542.4	chr7	-	1917	3	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGTCCT	NA	False	NA	NA	False	NA	NA	NA	30126196	30124064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_30125031_30125131_30125280_30125393
ES.30543.1	chr7	+	5396	31	NNC	ENSMUSG00000006649.18	novel	3877	29	NA	NA	-578	14	intron_retention	FALSE	canonical	0	0	junction_1	27.1016399667786	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTCCAAGCCAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	30157161	30186662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30157192_30157630_30157824_30159748_30159965_30160038_30160162_30160328_30160458_30160940_30161023_30161398_30161503_30162026_30162155_30162239_30162412_30162576_30162735_30162936_30163082_30163202_30163328_30164890_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30177752_30177785_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.10	chr7	+	4000	9	NNC	ENSMUSG00000006649.18	novel	3877	29	NA	NA	5347	-9804	intron_retention	FALSE	canonical	2	6	junction_1	16.9779268463496	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATGAGTACACTGTAG	NA	False	NA	NA	False	AGTAAA	-32	NA	30164496	30172158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30164594_30164890_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516
ES.30543.11	chr7	+	2836	20	NNC	ENSMUSG00000006649.18	novel	752	9	NA	NA	5461	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7689074515616	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164610	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30164650_30164890_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.12	chr7	+	2838	20	NNC	ENSMUSG00000006649.18	novel	752	9	NA	NA	5509	26	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	17.4942808224815	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGATGCCCCAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	30164658	30186674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30164680_30164890_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.13	chr7	+	4301	16	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5561	63	intron_retention	FALSE	canonical	0	0	junction_6	20.5927711156663	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGAGATGGCTCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	30164710	30186478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170587_30170669_30173701_30173814_30173895_30174078_30177283_30177785_30180805_30180926_30181066_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.14	chr7	+	2965	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5563	6	intron_retention	FALSE	canonical	2	33	junction_1	11.8248462831183	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164712	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.15	chr7	+	3915	18	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5574	12	intron_retention	FALSE	canonical	2	7	junction_15	15.5231716518078	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	30164723	30186660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181898_30182006_30186009_30186175_30186263
ES.30543.16	chr7	+	2900	19	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	5574	-26	5574	26	3prime_fragment	FALSE	canonical	2	33	junction_1	11.515555769973	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGATGCCCCAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	30164723	30186674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.17	chr7	+	3933	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5575	22	intron_retention	FALSE	canonical	2	33	junction_1	11.5237080729627	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAAAGGATGCCCCAGT	NA	False	NA	NA	False	NA	NA	NA	30164724	30186670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.18	chr7	+	2802	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5576	64	intron_retention	FALSE	canonical	2	34	junction_4	10.9591882102815	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGAGATGGCTCAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	30164725	30186479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.19	chr7	+	2924	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5605	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.3340163819699	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGCCAAAGGATGCCC	NA	False	NA	NA	False	NA	NA	NA	30164754	30186666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177340_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30181997_30186020_30186175_30186263
ES.30543.2	chr7	+	2929	20	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	4070	30	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	16.2361383452363	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCCCCAGTGGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	30163219	30186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.20	chr7	+	2662	19	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	5612	174	5612	59	3prime_fragment	FALSE	canonical	2	33	junction_1	11.515555769973	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGCTGGAGAGATGGCT	NA	False	NA	NA	False	ATTAAA	-12	NA	30164761	30186474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.21	chr7	+	2946	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5616	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9406600756666	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164765	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165078_30165152_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.22	chr7	+	3042	18	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5616	27	intron_retention	FALSE	canonical	2	13	junction_2	14.1051415200642	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGCCCCAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	30164765	30186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.23	chr7	+	2738	18	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5619	-41	intron_retention	FALSE	canonical	2	13	junction_2	14.1051415200642	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATGACATTTGAACAAT	NA	False	NA	NA	False	GGGGCT	-24	NA	30164768	30186374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.24	chr7	+	2927	18	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5621	1	intron_retention	FALSE	canonical	2	34	junction_4	10.9591882102815	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAAAAATTTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	30164770	30186649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.25	chr7	+	2667	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5633	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	14.2837212013545	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTTTTCAAAAGTAAAAA	NA	False	NA	NA	False	AATGAA	-20	NA	30164782	30186416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166560_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.26	chr7	+	2812	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5633	6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	15.2206000757745	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164782	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181898_30182006_30186009_30186175_30186263
ES.30543.29	chr7	+	2756	18	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5788	6	intron_retention	FALSE	canonical	2	7	junction_15	15.187182721991	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30164937	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181898_30182006_30186009_30186175_30186263
ES.30543.3	chr7	+	3652	19	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	4071	33	intron_retention	FALSE	canonical	2	12	junction_1	14.4270194041905	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATCTATTAAAAATCC	NA	False	NA	NA	False	AGTAAA	-15	NA	30163220	30186448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.30	chr7	+	3546	17	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5967	20	intron_retention	FALSE	canonical	0	0	junction_16	16.396931877641	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCCAAAGGATGCCCCA	NA	False	NA	NA	False	NA	NA	NA	30165116	30186668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186073_30186253
ES.30543.31	chr7	+	3429	17	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5986	63	intron_retention	FALSE	canonical	2	34	junction_3	10.8563057713018	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGAGATGGCTCAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	30165135	30186478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.32	chr7	+	2441	17	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	6245	-12	6245	12	3prime_fragment	FALSE	canonical	2	34	junction_3	11.1943065886191	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	30165394	30186660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.33	chr7	+	2949	16	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	6803	30	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	16.3780340700586	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCCCCAGTGGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	30165952	30186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186253
ES.30543.34	chr7	+	4104	5	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	851	12	intron_retention	FALSE	canonical	0	0	junction_1	26.9849495089392	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	8254	False	NA	NA	False	NA	NA	NA	30178140	30186660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30179980_30180161_30180926_30181066_30182006_30186009_30186175_30186263
ES.30543.35	chr7	+	2749	7	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	1667	27	intron_retention	FALSE	canonical	0	0	junction_1	23.8216754705084	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGCCCCAGTGGGAG	9070	False	NA	NA	False	NA	NA	NA	30178956	30186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30179980_30180161_30180926_30181066_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.36	chr7	+	5993	5	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	2433	12	intron_retention	FALSE	non_canonical	0	0	junction_1	28.065770967497	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTCCAAGCCAAAGG	9836	False	NA	NA	False	NA	NA	NA	30179722	30186660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30179980_30180161_30180926_30181066_30184081_30184613_30186175_30186263
ES.30543.37	chr7	+	5078	3	NNC	ENSMUSG00000006649.18	novel	1987	2	NA	NA	-3361	30	intron_retention	FALSE	non_canonical	0	0	junction_1	32	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCCCCAGTGGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	30180978	30186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30184081_30184613_30186175_30186263
ES.30543.4	chr7	+	2792	20	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	4092	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.6511282038799	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30163241	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30163328_30164890_30165071_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.5	chr7	+	3017	19	NIC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	4097	6	intron_retention	FALSE	canonical	0	0	junction_12	20.591260281974	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCTGTTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	30163246	30186654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30177722_30177785_30180805_30180926_30181066_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.6	chr7	+	2812	20	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	4100	-27	4100	27	3prime_fragment	FALSE	canonical	2	12	junction_1	14.2015566233535	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGCCCCAGTGGGAG	NA	False	NA	NA	False	NA	NA	NA	30163249	30186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30543.7	chr7	+	2783	20	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	4117	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	17.1888645265448	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTCTGTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	30163266	30186653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186253
ES.30543.9	chr7	+	3921	19	NNC	ENSMUSG00000006649.18	novel	752	9	NA	NA	5292	24	intron_retention	FALSE	canonical	2	6	junction_1	15.3306157011967	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGGATGCCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	30164441	30186672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30164594_30164890_30165078_30165176_30165307_30165433_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
ES.30544.1	chr7	-	2382	16	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-45	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.262526901001	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGTGTTTCTGTTGGAG	NA	False	NA	-1	True	AATAAA	-21	NA	30145005	30134405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30136194_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.11	chr7	-	3802	12	NIC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-35	0	intron_retention	FALSE	canonical	3	325	junction_7	61.8205881884582	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30144995	30134406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30134817_30134900_30135234_30135397_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30142336_30142516_30142650_30143742
ES.30544.12	chr7	-	2392	17	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_4	107.442135589349	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30145018	30134406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135460_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.13	chr7	-	2410	17	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.91728068757	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30145011	30134406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135061_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.15	chr7	-	3732	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-1390	1	-1390	-1	multi-exon	FALSE	canonical	3	317	junction_16	59.4064390449386	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCCGTGTTTCTGTTGG	NA	False	NA	-3	True	AATAAA	-19	NA	30146350	30134407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.17	chr7	-	3037	15	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-18	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	173.549278422056	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCCCGTGTTTCTGTTG	NA	False	NA	-4	True	AATAAA	-18	NA	30144978	30134408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135628_30135759_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30142039_30142222_30142336_30142538_30142650_30143742_30143881_30144746
ES.30544.18	chr7	-	2305	16	NIC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	113.262526901001	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATCCCGTGTTTCTGTT	NA	False	NA	-5	True	AATAAA	-17	NA	30144949	30134409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.19	chr7	-	3130	9	NIC	ENSMUSG00000006651.9	novel	2472	16	NA	NA	1533	-3	intron_retention	FALSE	canonical	3	325	junction_5	51.3394037265724	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATCCCGTGTTTCTGTT	NA	False	NA	-5	True	AATAAA	-17	NA	30142488	30134409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30134817_30134900_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30142039_30142222
ES.30544.2	chr7	-	2454	18	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-20402	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	108.860438891773	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGTGTTTCTGTTGGAG	4371	False	NA	-1	True	AATAAA	-21	NA	30165362	30134405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746_30145056_30165347
ES.30544.20	chr7	-	1443	2	NIC	ENSMUSG00000006651.9	novel	496	5	NA	NA	-9	2	intron_retention	FALSE	canonical	3	435	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCATCCCGTGTTTCTGT	NA	False	NA	-6	True	AATAAA	-16	NA	30136437	30134410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30135628_30136211
ES.30544.22	chr7	-	2370	17	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	111.566684095208	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCATCCCGTGTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	30145000	30134413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137697_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.23	chr7	-	991	7	NNC	ENSMUSG00000006651.9	novel	2472	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	222.80092010582	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCCATCCCGTGTTTC	NA	False	NA	-9	True	AATAAA	-13	NA	30136424	30134413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30135788_30135862_30136211
ES.30544.24	chr7	-	1639	10	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.181765079027	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCGGCCATCCCGTGTT	NA	False	NA	-11	True	AATAAA	-11	NA	30145027	30134415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135433_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.25	chr7	-	1466	7	ISM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	-12	6266	-12	1080	5prime_fragment	FALSE	canonical	3	317	junction_6	29.0153216230475	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTTCAGCGGTATTAGG	NA	False	NA	NA	False	AATAAA	-32	NA	30144972	30140672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.26	chr7	-	3068	12	NIC	ENSMUSG00000036915.18	novel	3352	15	NA	NA	488	4	intron_retention	FALSE	canonical	2	4	junction_11	12.8223719779336	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGAAAGACCTCC	NA	False	NA	NA	False	AATAAA	-22	NA	30156452	30146954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30156222
ES.30544.27	chr7	-	3591	18	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	-577	4	intron_retention	FALSE	canonical	1	1	junction_12	14.8461545357129	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGAAAGACCTCC	4140	False	NA	NA	False	AATAAA	-22	NA	30165593	30146954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154852_30155040_30155844_30155995_30156222_30156405_30160018_30160158_30164873_30165285_30165411
ES.30544.28	chr7	-	5675	19	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	1897	4	intron_retention	TRUE	non_canonical	0	0	junction_15	14.787903798897	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTGAAAGACCTCC	6614	False	NA	NA	False	AATAAA	-22	NA	30163119	30146954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222_30156586_30156632_30156707_30160018_30160158_30160377_30162370_30162652
ES.30544.30	chr7	-	5381	17	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	2151	-1	intron_retention	FALSE	canonical	1	2	junction_15	12.4798274727658	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGTGCTTGTGAAAGA	6868	False	NA	NA	False	AATAAA	-17	NA	30162865	30146959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222_30156405_30160018_30162370_30162652
ES.30544.31	chr7	-	5848	17	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	1756	0	intron_retention	FALSE	non_canonical	0	0	junction_16	15.0165273532199	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAATGTGCTTGTGAAAG	6473	False	NA	NA	False	AATAAA	-16	NA	30163260	30146960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152159_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222_30156405_30160018_30162466_30162508
ES.30544.35	chr7	-	5601	18	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	2026	-5	intron_retention	FALSE	non_canonical	0	0	junction_15	14.8991999506534	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACGCAAATGTGCTTGT	6743	False	NA	NA	False	AATAAA	-11	NA	30162990	30146965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222_30156486_30160018_30160158_30160377_30162466_30162508
ES.30544.36	chr7	-	5501	18	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	1465	-148	intron_retention	FALSE	canonical	0	0	junction_17	14.4916155212324	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAAAATGGCCACTATC	6182	False	NA	NA	False	NA	NA	NA	30163551	30147108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154852_30155040_30155844_30155995_30156222_30156405_30160018_30162370_30162652_30163068_30163521
ES.30544.37	chr7	-	1606	11	ISM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	2979	444	1946	91	3prime_fragment	FALSE	canonical	3	21	junction_5	9.86356933366416	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGACTGTTGGTGTACA	NA	False	NA	92	True	NA	NA	NA	30153961	30147404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933
ES.30544.38	chr7	-	4038	17	Fusion	ENSMUSG00000036915.18_ENSMUSG00000087009.2	novel	3352	15	NA	NA	3357	-4	intron_retention	FALSE	non_canonical	0	0	junction_15	15.1203505250374	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGTTGTCCAGATT	8074	False	NA	-3	True	NA	NA	NA	30161659	30147499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152191_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222_30156586_30156632_30156707_30160018
ES.30544.39	chr7	-	2428	15	FSM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	376	548	376	-13	multi-exon	FALSE	canonical	3	10	junction_12	10.266102334521	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCCATATAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	30156564	30147508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
ES.30544.4	chr7	-	2576	15	NNC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-37	1	intron_retention	TRUE	canonical	0	0	junction_10	111.184829570093	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGTGTTTCTGTTGGAG	NA	False	NA	-1	True	AATAAA	-21	NA	30144997	30134405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30134817_30134900_30135045_30135170_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141682_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.40	chr7	-	1302	4	NNC	ENSMUSG00000087009.2	novel	1339	3	NA	NA	-592	-185	intron_retention	FALSE	canonical	0	0	junction_2	5.09901951359278	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCTTGCTTTTTGT	4125	False	NA	NA	False	NA	NA	NA	30165608	30161773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30162370_30162652_30163068_30165190_30165285_30165411
ES.30544.41	chr7	-	919	2	NNC	ENSMUSG00000087009.2	novel	1339	3	NA	NA	-597	-2979	intron_retention	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATACTCTTTCCCTTTTCT	4120	False	NA	NA	False	NA	NA	NA	30165613	30164567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30165285_30165411
ES.30544.5	chr7	-	4111	30	Fusion	ENSMUSG00000036915.18_ENSMUSG00000006651.9	novel	2343	17	NA	NA	452	1	multi-exon	FALSE	canonical	1	1	junction_16	189.091765025544	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGTGTTTCTGTTGGAG	NA	False	NA	-1	True	AATAAA	-21	NA	30156488	30134405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
ES.30544.8	chr7	-	3102	15	NIC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-40	0	intron_retention	FALSE	canonical	3	317	junction_14	61.4098393365993	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30145000	30134406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ES.30544.9	chr7	-	1108	5	NIC	ENSMUSG00000006651.9	novel	2343	17	NA	NA	-44	0	intron_retention	FALSE	canonical	3	435	junction_4	29.8024747294583	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30136472	30134406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135628_30136211
ES.30545.1	chr7	-	232	1	FSM	ENSMUSG00000109509.2	ENSMUST00000208689.2	397	1	192	-27	192	27	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAACT	9827	False	NA	-14	True	AATAAA	-27	NA	30184330	30184098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30184100_30184300
ES.30546.1	chr7	+	5579	9	NNC	ENSMUSG00000062132.11	novel	2648	12	NA	NA	53	-4	intron_retention	TRUE	canonical	0	0	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTGTCTCTATCATT	NA	False	NA	NA	False	NA	NA	NA	30214599	30221614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30214627_30215083_30216783_30216888_30218695_30218771_30218897_30218992_30219086_30219491_30219775_30219903_30220336_30220417_30220643_30220725
ES.30547.1	chr7	-	4527	22	NNC	ENSMUSG00000036882.8	novel	4337	21	NA	NA	-12	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.71887665211813	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGATAGAGACAAACTG	9068	False	NA	NA	False	AATAAA	-30	NA	30234449	30221636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226176_30226389_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30232359_30232458_30234350
ES.30547.2	chr7	-	4416	22	FSM	ENSMUSG00000036882.8	ENSMUST00000207860.2	4396	22	-15	-5	-12	5	multi-exon	FALSE	canonical	0	0	junction_17	2.7823545062841	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCTAGTGAATGATAGA	9068	False	NA	NA	False	AATAAA	-21	NA	30234449	30221645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30232359_30232458_30233527_30233638_30234350
ES.30547.3	chr7	-	4026	6	NNC	ENSMUSG00000036882.8	novel	4280	21	NA	NA	1546	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1.6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCTAGTGAATGATAGA	5571	False	NA	NA	False	AATAAA	-21	NA	30226624	30221645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30223272_30223368_30224474_30224517_30225455_30225538_30225685_30225771_30225926_30226566
ES.30547.4	chr7	-	4293	21	FSM	ENSMUSG00000036882.8	ENSMUST00000207858.2	4337	21	42	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_17	2.5588083163848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGCTGGAGCTAGTGAA	9074	False	NA	NA	False	AATAAA	-14	NA	30234443	30221652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30232359_30232458_30234350
ES.30548.1	chr7	+	173	1	Intergenic	novelGene_25191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	30245009	30245182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30245000_30245200
ES.30549.1	chr7	+	183	1	Antisense	novelGene_ENSMUSG00000036864.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAGCATACAAATGAA	NA	False	NA	NA	False	NA	NA	NA	30250988	30251171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_30251000_30251200
ES.3055.1	chr10	-	178	1	Intergenic	novelGene_2385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCACA	NA	False	NA	NA	False	NA	NA	NA	69959899	69959721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69959700_69959900
ES.30550.1	chr7	-	4373	4	ISM	ENSMUSG00000036864.17	ENSMUST00000215288.2	2465	12	8650	-226	6048	226	intron_retention	FALSE	canonical	3	54	junction_1	1.4142135623731	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAATTGTGCTAATAAGGA	475	False	NA	NA	False	NA	NA	NA	30243042	30238332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345
ES.30550.12	chr7	-	2242	9	NIC	ENSMUSG00000036864.17	novel	2466	12	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22.6243093817248	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTTCCAGTTTACTG	NA	False	NA	-8	True	AATAAA	-14	NA	30251735	30238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239004_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245727_30245853_30248465_30248634_30249031_30249129_30251632
ES.30550.14	chr7	-	2480	11	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-62	-2	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	7.82304288624318	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTTCCAGTTTACTG	NA	False	NA	-8	True	AATAAA	-14	NA	30251786	30238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
ES.30550.15	chr7	-	2559	12	NNC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.8288465301332	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTTCCAGTTTACTG	NA	False	NA	-8	True	AATAAA	-14	NA	30251778	30238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248644_30249031_30249129_30250182_30250260_30251632
ES.30550.17	chr7	-	1871	6	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-28	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.6097324177001	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTTCCAGTTTACT	NA	False	NA	-9	True	AATAAA	-13	NA	30251752	30238561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30251632
ES.30550.18	chr7	-	2490	12	NNC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	20.8342534232086	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTTTTCCAGTTTACT	NA	False	NA	-9	True	AATAAA	-13	NA	30251729	30238561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245654_30245727_30245841_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ES.30550.2	chr7	-	2531	10	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	9	209	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	18.3491514251938	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTGTTGTAGAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	30251708	30238349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239008_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
ES.30550.3	chr7	-	2695	12	FSM	ENSMUSG00000036864.17	ENSMUST00000108165.8	2466	12	-43	-186	-16	186	multi-exon	TRUE	canonical	3	10	junction_1	15.6395345622021	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30251740	30238372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30239004_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ES.30550.4	chr7	-	2519	12	NNC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.5178775271964	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTACTGTTCATCTC	NA	False	NA	0	True	AATAAA	-22	NA	30251737	30238552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240525_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ES.30550.5	chr7	-	750	1	Genic_Genomic	ENSMUSG00000036864.17	novel	NA	NA	NA	NA	9787	5	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTACTGTTCATCT	4214	False	NA	-1	True	AATAAA	-21	NA	30239303	30238553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_30238600_30239300
ES.30550.6	chr7	-	2414	11	NNC	ENSMUSG00000036864.17	novel	2466	12	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	20.3076340325504	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTACTGTTCATCT	NA	False	NA	-1	True	AATAAA	-21	NA	30251729	30238553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30239004_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245841_30248465_30248634_30249031_30249129_30251632
ES.30550.8	chr7	-	4588	2	NIC	ENSMUSG00000036864.17	novel	1905	10	NA	NA	5860	4	intron_retention	FALSE	canonical	3	57	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTTACTGTTCATC	287	False	NA	-2	True	AATAAA	-20	NA	30243230	30238554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239256_30239343
ES.30550.9	chr7	-	4818	10	NIC	ENSMUSG00000036864.17	novel	2465	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	37	junction_9	7.87087144374437	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCAGTTTACTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	30251732	30238558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30251632
ES.30551.1	chr7	+	2130	3	FSM	ENSMUSG00000036854.15_ENSMUSG00000106236.3	ENSMUST00000044048.8	1363	3	-769	2	-25	1	multi-exon	FALSE	canonical	3	14	junction_1	10.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTATGTCTGGGCC	NA	False	NA	10	True	AATAAA	-18	NA	30251923	30254866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30252958_30253686_30253810_30253893
ES.30551.2	chr7	+	2296	2	NNC	ENSMUSG00000036854.15	novel	1980	3	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251966	30254865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30252821_30253423
ES.30551.3	chr7	+	1280	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	18	0	18	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGCCTTATGTCTGGG	NA	False	NA	8	True	AATAAA	-16	NA	30251966	30254864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30252153_30253686_30253810_30253893
ES.30551.4	chr7	+	1331	3	NNC	ENSMUSG00000036854.15	novel	1980	3	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	False	NA	9	True	AATAAA	-17	NA	30251986	30254865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30252153_30253616_30253810_30253893
ES.30552.1	chr7	-	1015	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	-15	-2	-2	2	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4870	False	NA	-4	True	NA	NA	NA	30259086	30254863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ES.30552.10	chr7	-	1364	5	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	30	-40	intron_retention	FALSE	canonical	3	235	junction_4	21.8446217637202	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCCAGGCCATCGTT	4922	False	NA	-50	True	AATAAA	-16	NA	30259034	30254909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255415_30256282_30256720_30257050_30257384_30258866
ES.30552.2	chr7	-	1182	8	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	17	2	intron_retention	FALSE	canonical	3	222	junction_2	24.3922035051517	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4909	False	NA	-4	True	NA	NA	NA	30259047	30254863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257384_30258866
ES.30552.3	chr7	-	1030	9	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	84.2229184960958	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4888	False	NA	-4	True	NA	NA	NA	30259068	30254863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257274_30257384_30258866
ES.30552.4	chr7	-	1134	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	184	-6	5	2	multi-exon	FALSE	canonical	3	52	junction_8	74.6976196073208	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4877	False	NA	-4	True	NA	NA	NA	30259079	30254863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ES.30552.5	chr7	-	1239	6	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	2	2	intron_retention	FALSE	canonical	3	235	junction_5	19.5509590557599	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCAAGTGCATTTATT	4887	False	NA	-4	True	NA	NA	NA	30259069	30254863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255415_30256282_30256720_30257050_30257102_30257307_30257384_30258866
ES.30552.6	chr7	-	1078	8	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	235	junction_7	16.9428812334206	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGACAAATCTCAAGTGC	4887	False	NA	-11	True	NA	NA	NA	30259069	30254870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ES.30552.7	chr7	-	1941	7	NIC	ENSMUSG00000036845.13	novel	998	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	222	junction_2	25.9079567357641	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGACAAATCTCAAGTGC	4884	False	NA	-11	True	NA	NA	NA	30259072	30254870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30255187_30255273_30256450_30256524_30256720_30257050_30257102_30257307_30257384_30258866
ES.30552.8	chr7	-	3768	3	NIC	ENSMUSG00000036845.13	novel	1312	9	NA	NA	14	-3	intron_retention	FALSE	canonical	3	284	junction_2	4	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTGACAAATCTCAAGT	4906	False	NA	-13	True	NA	NA	NA	30259050	30254872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30255034_30255112_30256720_30257050
ES.30552.9	chr7	-	930	9	NNC	ENSMUSG00000036845.13	novel	998	9	NA	NA	-1	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.1595807443668	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCCAGGCCATCGTT	4884	False	NA	-50	True	AATAAA	-16	NA	30259072	30254909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256586_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ES.30553.1	chr7	-	742	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	-29	-5	-29	3	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTTGGGATCTTTCGGA	1261	False	NA	0	True	AATAAA	-22	NA	30262695	30261284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ES.30553.2	chr7	-	836	3	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	58	-3	intron_retention	FALSE	canonical	3	560	junction_2	148	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGAGTTCTTGGGAT	1348	False	NA	-8	True	AATAAA	-14	NA	30262608	30261292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30261854_30262220_30262364_30262476
ES.30553.3	chr7	-	600	4	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	54	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	381.68660792156	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGAGTTCTTGGGAT	1344	False	NA	-8	True	AATAAA	-14	NA	30262612	30261292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30261560_30261748_30261854_30262220_30262313_30262476
ES.30553.4	chr7	-	513	3	NIC	ENSMUSG00000036835.8	novel	708	4	NA	NA	47	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	390	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATTGAGTTCTTGGG	1337	False	NA	-10	True	AATAAA	-12	NA	30262619	30261294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30261560_30261748_30261854_30262476
ES.30554.1	chr7	+	4348	2	FSM	ENSMUSG00000078765.12_ENSMUSG00000036826.15	ENSMUST00000170453.2	410	2	-37	-3901	2	1	multi-exon	FALSE	canonical	3	637	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262727	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30263045_30263354
ES.30554.10	chr7	+	1397	5	FSM	ENSMUSG00000078765.12	ENSMUST00000164438.8	635	5	-11	-751	-1	0	multi-exon	FALSE	canonical	3	39	junction_1	253.928508639735	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262742	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627
ES.30554.11	chr7	+	2985	10	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	13	junction_8	258.539917399401	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262742	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.12	chr7	+	854	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	181.681713163321	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262743	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30554.13	chr7	+	1044	7	NIC	ENSMUSG00000078765.12	novel	564	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	6	junction_4	217.515069720596	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262746	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263820_30263898_30264033_30264127_30264224_30264519
ES.30554.14	chr7	+	3270	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-19	1	intron_retention	FALSE	canonical	3	13	junction_7	267.96489975368	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262749	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30265807_30266173_30266926_30267005
ES.30554.15	chr7	+	1945	2	ISM	ENSMUSG00000078765.12	ENSMUST00000165524.9	582	6	-552	-177	1	2	intron_retention	FALSE	canonical	3	651	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAAGGTCTGTGGTTT	NA	False	NA	27	True	AATAAA	-15	NA	30262751	30264781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30263422_30263506
ES.30554.16	chr7	+	3242	8	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	13	junction_6	273.692587866499	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262751	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.17	chr7	+	3558	7	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-14	1	intron_retention	FALSE	canonical	3	13	junction_5	262.397704935763	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262754	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30264033_30264127_30265807_30266173_30266926_30267005
ES.30554.18	chr7	+	1241	5	NIC	ENSMUSG00000078765.12	novel	883	6	NA	NA	2	-1	intron_retention	FALSE	canonical	3	497	junction_3	64.9153294684699	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262756	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30263045_30263354_30263422_30263506_30264033_30264127_30264224_30264519
ES.30554.19	chr7	+	2812	11	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	1	junction_9	250.990119327435	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCTGCCTGTCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	30262756	30267382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266362_30266567_30266926_30267005
ES.30554.2	chr7	+	819	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163330.3	583	8	-2	-234	-2	0	multi-exon	FALSE	canonical	3	25	junction_1	197.894529732277	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGTCTGTGGTTTCCT	NA	False	NA	30	True	AATAAA	-18	NA	30262729	30264784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262775_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30554.20	chr7	+	3375	8	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	1	junction_6	284.324979341512	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCTGCCTGTCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	30262756	30267382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30265807_30266173_30266362_30266567_30266926_30267005
ES.30554.21	chr7	+	1404	5	FSM	ENSMUSG00000078765.12	ENSMUST00000169911.8	656	5	2	-750	2	-1	multi-exon	FALSE	canonical	3	74	junction_1	238.867117871004	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262756	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627
ES.30554.22	chr7	+	2031	1	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	2	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262756	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262800_30264800
ES.30554.23	chr7	+	900	6	NIC	ENSMUSG00000078765.12	novel	874	7	NA	NA	2	2	intron_retention	FALSE	canonical	3	54	junction_5	221.369013188386	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAAGGTCTGTGGTTT	NA	False	NA	27	True	AATAAA	-15	NA	30262756	30264781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ES.30554.24	chr7	+	3293	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-12	1	intron_retention	FALSE	canonical	3	13	junction_7	262.855919421648	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTGTCCTCATTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	30262756	30267386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30265807_30266173_30266926_30267005
ES.30554.25	chr7	+	770	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	7	4	2	-1	multi-exon	FALSE	canonical	3	54	junction_6	203.636454387606	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262756	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ES.30554.26	chr7	+	879	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	-18	-1	2	0	multi-exon	FALSE	canonical	3	61	junction_1	185.966751472034	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262756	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30554.27	chr7	+	3726	7	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	505	7	NA	NA	2	-3	intron_retention	FALSE	canonical	3	27	junction_6	251.288015366166	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262756	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263727_30263898_30264033_30264127_30266926_30267005
ES.30554.28	chr7	+	1347	6	NIC	ENSMUSG00000078765.12	novel	860	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	61	junction_1	218.736736740768	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262756	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127
ES.30554.29	chr7	+	921	6	NIC	ENSMUSG00000078765.12	novel	781	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	54	junction_5	274.531892500671	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262756	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264519
ES.30554.3	chr7	+	897	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	-16	3	-2	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262729	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30554.30	chr7	+	3523	8	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-12	1	intron_retention	FALSE	canonical	3	6	junction_4	274.925815596922	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262756	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263820_30263898_30264033_30264127_30264224_30264519_30266926_30267005
ES.30554.31	chr7	+	3361	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	27	junction_8	229.325062683955	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCCTGTCCTCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	30262757	30267384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30266926_30267005
ES.30554.32	chr7	+	3634	6	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	405	6	NA	NA	1	1	intron_retention	FALSE	canonical	3	13	junction_4	303.991052499905	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262761	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262834_30262981_30263045_30263354_30263422_30263506_30265807_30266173_30266926_30267005
ES.30554.33	chr7	+	3157	10	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_8	261.652913061522	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262763	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30266362_30266567_30266926_30267005
ES.30554.34	chr7	+	3479	8	NNC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_4	275.721317452893	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262763	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263630_30264033_30264127_30265807_30266173_30266926_30267005
ES.30554.35	chr7	+	847	8	NIC	ENSMUSG00000078765.12	novel	860	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	195.900745380962	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262763	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30554.36	chr7	+	847	8	FSM	ENSMUSG00000078765.12	ENSMUST00000163464.8	651	8	-17	-179	0	-1	multi-exon	FALSE	canonical	0	0	junction_6	207.522607570985	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262763	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264021_30264127_30264224_30264519
ES.30554.37	chr7	+	3083	10	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-5	1	intron_retention	FALSE	canonical	3	6	junction_5	277.463422124942	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTGTCCTCATTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	30262763	30267386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30263820_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.38	chr7	+	1395	5	NIC	ENSMUSG00000078765.12	novel	564	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	411	junction_1	99.8699153899712	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAAGGTCTGTGGTTT	NA	False	NA	27	True	AATAAA	-15	NA	30262764	30264781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30264033_30264127
ES.30554.39	chr7	+	3542	8	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6	junction_4	251.350556078192	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262764	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263820_30263898_30264033_30264127_30264224_30264519_30266926_30267005
ES.30554.4	chr7	+	1107	6	FSM	ENSMUSG00000078765.12	ENSMUST00000168555.8	883	6	-30	-194	2	-1	multi-exon	FALSE	canonical	3	74	junction_1	210.947955666795	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262733	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30264033_30264127_30264224_30264519
ES.30554.40	chr7	+	792	8	NNC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_5	190.298262134546	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262764	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263964_30264033_30264127_30264224_30264519
ES.30554.41	chr7	+	3761	5	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	883	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	74	junction_1	215.506815437471	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262764	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262825_30262981_30263045_30263354_30264033_30264127_30264224_30264519
ES.30554.42	chr7	+	4071	4	ISM	ENSMUSG00000078765.12_ENSMUSG00000036826.15	ENSMUST00000168555.8	883	6	1	-2798	0	0	intron_retention	FALSE	canonical	3	74	junction_1	268.761356349209	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGTCCTCATTAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	30262764	30267387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506
ES.30554.43	chr7	+	3631	7	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	860	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	27	junction_6	258.819757102634	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262765	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30264033_30264127_30264224_30264519_30266926_30267005
ES.30554.44	chr7	+	821	9	NNC	ENSMUSG00000078765.12	novel	884	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	194.32925506727	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262765	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30263929_30263964_30264033_30264127_30264224_30264519
ES.30554.45	chr7	+	3252	8	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	13	junction_6	249.808416387357	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCTGCCTGTCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	30262765	30267382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.46	chr7	+	3168	10	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-2	1	intron_retention	FALSE	canonical	1	1	junction_8	230.501385871948	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262766	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30266362_30266567_30266926_30267005
ES.30554.47	chr7	+	4150	3	ISM	ENSMUSG00000078765.12_ENSMUSG00000036826.15	ENSMUST00000168555.8	883	6	3	-2794	0	-1	intron_retention	FALSE	canonical	3	74	junction_1	281.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262766	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30262825_30262981_30263045_30263354
ES.30554.48	chr7	+	4532	2	ISM	ENSMUSG00000078765.12_ENSMUSG00000036826.15	ENSMUST00000165524.9	582	6	-537	-2779	0	-1	intron_retention	FALSE	canonical	3	651	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262766	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30263422_30263506
ES.30554.49	chr7	+	3941	6	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	781	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	27	junction_5	233.075438431423	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTGTCCTCATTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	30262767	30267386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30266926_30267005
ES.30554.5	chr7	+	1655	3	FSM	ENSMUSG00000078765.12	ENSMUST00000169962.2	568	3	-80	-1007	6	0	multi-exon	FALSE	canonical	3	637	junction_1	7	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262737	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30263045_30263354_30263422_30263506
ES.30554.50	chr7	+	4014	5	FSM	ENSMUSG00000078765.12_ENSMUSG00000036826.15	ENSMUST00000165543.8	519	5	-17	-3478	1	-5	multi-exon	FALSE	canonical	3	411	junction_1	95.384419587268	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTATCTGCCTGTCCT	NA	False	NA	NA	False	AATAAA	-12	NA	30262767	30267379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627
ES.30554.51	chr7	+	3644	6	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_4	280.91450656739	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTGTCCTCATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	30262767	30267385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30265807_30266173_30266926_30267005
ES.30554.52	chr7	+	3675	8	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-1	2	intron_retention	FALSE	canonical	3	27	junction_7	197.38856324002	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGTCCTCATTAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	30262767	30267387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30266926_30267005
ES.30554.53	chr7	+	3554	6	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	883	6	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_5	293.076372299099	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGCCTGTCCTCATTA	NA	False	NA	NA	False	AATAAA	-17	NA	30262767	30267384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30263045_30263354_30263422_30263506_30264033_30264127_30265807_30266173_30266362_30266567
ES.30554.54	chr7	+	3014	10	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_8	255.353978471039	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTATCTGCCTGTCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	30262767	30267380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.55	chr7	+	1552	4	ISM	ENSMUSG00000078765.12	ENSMUST00000169283.8	728	5	-33	2	1	0	intron_retention	FALSE	canonical	3	578	junction_3	31.6333157709821	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262769	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627
ES.30554.56	chr7	+	1157	6	NIC	ENSMUSG00000078765.12	novel	874	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	497	junction_4	58.0744349950992	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262769	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30264224_30264519
ES.30554.57	chr7	+	2950	10	NNC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_8	289.305298180928	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262769	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30264038_30264127_30264224_30264519_30265807_30266173_30266362_30266567_30266926_30267005
ES.30554.58	chr7	+	3578	7	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_5	295.359902868047	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262769	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30265807_30266173_30266926_30267005
ES.30554.59	chr7	+	3816	7	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	505	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	27	junction_6	259.802916757213	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262769	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262825_30262981_30263045_30263354_30263422_30263506_30263557_30263627_30264033_30264127_30266926_30267005
ES.30554.6	chr7	+	3407	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-30	1	intron_retention	FALSE	canonical	3	27	junction_8	186.145104689863	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTGTCCTCATTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	30262738	30267386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30266926_30267005
ES.30554.60	chr7	+	3074	9	NNC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_3	253.959027207146	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCTGCCTGTCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	30262769	30267382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30262825_30262956_30263045_30263354_30263426_30263602_30263727_30263898_30264033_30264127_30265807_30266173_30266362_30266567_30266926_30267005
ES.30554.61	chr7	+	3085	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	13	junction_7	261.109860738732	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCTGCCTGTCCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	30262769	30267382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.62	chr7	+	1849	3	NIC	ENSMUSG00000078765.12	novel	582	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	497	junction_2	40.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262772	30264787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30263557_30263627_30264033_30264127
ES.30554.63	chr7	+	3291	9	NIC	ENSMUSG00000109378.2	novel	3007	10	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	13	junction_7	238.102262693995	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCAGTATCTGCCTG	NA	False	NA	NA	False	AATAAA	-8	NA	30262772	30267375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30265807_30266173_30266926_30267005
ES.30554.64	chr7	+	1698	2	FSM	ENSMUSG00000078765.12	ENSMUST00000170453.2	410	2	9	-1297	0	2	multi-exon	FALSE	canonical	3	637	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAAGGTCTGTGGTTT	NA	False	NA	27	True	AATAAA	-15	NA	30262773	30264781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30263045_30263354
ES.30554.65	chr7	+	2106	12	NIC	ENSMUSG00000109378.2	novel	2890	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	274.613928848038	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCCTGTCCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	30262775	30267383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30264892_30265588_30265807_30266173_30266362_30266567_30266926_30267005
ES.30554.66	chr7	+	2974	8	ISM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	478	-3	463	1	3prime_fragment	FALSE	canonical	3	13	junction_6	244.195889918445	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCCTGTCCTCATTAAA	70	False	NA	NA	False	AATAAA	-19	NA	30263246	30267386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ES.30554.7	chr7	+	3806	4	Fusion	ENSMUSG00000078765.12_ENSMUSG00000036826.15	novel	1224	4	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	13	junction_3	280.884713400751	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATCTGCCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	30262741	30267381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30262825_30262981_30263045_30263354_30265807_30266173
ES.30554.8	chr7	+	1517	4	FSM	ENSMUSG00000078765.12	ENSMUST00000169071.8	629	4	-29	-859	-2	1	multi-exon	FALSE	canonical	3	411	junction_1	109.985857676744	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTGTGGTTTCCTT	NA	False	NA	31	True	AATAAA	-19	NA	30262741	30264785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506
ES.30554.9	chr7	+	831	8	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	193.245851659676	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	False	NA	29	True	AATAAA	-17	NA	30262741	30264783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ES.30555.1	chr7	+	174	1	Intergenic	novelGene_25192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGAAATG	128	False	NA	NA	False	NA	NA	NA	30280687	30280861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30280700_30280900
ES.30556.1	chr7	+	2663	3	Intergenic	novelGene_25193	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGTTTCCTTTTAAT	7872	False	NA	NA	False	GATAAA	-19	NA	30288431	30293334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30288534_30288943_30289031_30290860
ES.30556.2	chr7	+	2809	1	Antisense	novelGene_ENSMUSG00000006310.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATTTGTTTGTTTCCTT	9961	False	NA	NA	False	GATAAA	-14	NA	30290520	30293329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_30290500_30293300
ES.30557.1	chr7	-	9194	9	NIC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	-867	21	intron_retention	FALSE	canonical	3	74	junction_4	17.5053563231372	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTGGTTGTTGTGTT	1093	False	NA	-2	True	AATAAA	-39	NA	30279286	30268261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276577_30276721_30278220_30278304_30278421_30278931_30279006_30279145
ES.30557.10	chr7	-	7842	33	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-1100	0	intron_retention	FALSE	canonical	3	47	junction_32	35.5071378167475	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30285865	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30283622_30283873_30284025_30284117_30284232_30284418
ES.30557.11	chr7	-	8329	36	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	39.9659446866189	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288149	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.12	chr7	-	5738	32	NIC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	548	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	40.2473621009801	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30283951	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873
ES.30557.13	chr7	-	4422	6	NNC	ENSMUSG00000006307.17	novel	8454	37	NA	NA	286	0	intron_retention	FALSE	canonical	1	1	junction_2	67.7448152997704	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	7066	False	NA	-23	True	AATAAA	-18	NA	30273313	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269066_30269182_30269267_30269362_30269471_30269715_30270054_30270125
ES.30557.14	chr7	-	8569	36	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-9	0	intron_retention	FALSE	canonical	3	32	junction_35	37.4198899419187	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288160	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.15	chr7	-	9127	34	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_33	37.1438273720645	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288150	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.16	chr7	-	6367	35	NIC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	39.1522734848328	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30288147	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30287779
ES.30557.18	chr7	-	4673	22	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-2091	-1	intron_retention	FALSE	canonical	3	64	junction_21	33.1595469745224	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30280510	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279700_30279863_30279978_30280439
ES.30557.2	chr7	-	8735	37	FSM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	-247	-19	-238	19	multi-exon	FALSE	canonical	3	32	junction_36	36.953257094288	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTGTGGTTGTTGTG	NA	False	NA	-4	True	AATAAA	-37	NA	30288389	30268263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.20	chr7	-	6164	32	NNC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	504	-1	intron_retention	FALSE	canonical	0	0	junction_28	39.7179965605069	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30283995	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282141_30282308_30282608_30283181_30283341_30283622_30283873
ES.30557.21	chr7	-	8716	36	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	32	junction_35	36.8483267418409	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30288153	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.24	chr7	-	8494	37	NNC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	39.79766534191	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30288127	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278890_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.25	chr7	-	5907	29	NNC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	1319	-1	intron_retention	FALSE	canonical	0	0	junction_15	39.1567200425393	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30283180	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276819_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30282308_30282608
ES.30557.26	chr7	-	8652	35	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-215	-1	intron_retention	FALSE	canonical	0	0	junction_30	40.705372319144	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	False	NA	-24	True	AATAAA	-17	NA	30288366	30268283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30283181_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.27	chr7	-	8405	36	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	38.2803834241775	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	NA	False	NA	-25	True	AATAAA	-16	NA	30288153	30268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30287779
ES.30557.29	chr7	-	4711	8	NIC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	-166	0	intron_retention	FALSE	canonical	3	102	junction_6	29.1596590221099	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	6614	False	NA	-25	True	AATAAA	-16	NA	30273765	30268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30273492_30273572
ES.30557.3	chr7	-	10407	31	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	1	2	intron_retention	FALSE	canonical	3	32	junction_30	39.0064951856312	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTCTTTCCGTGCCTTA	NA	False	NA	-21	True	AATAAA	-20	NA	30288150	30268280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30282308_30282608_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.30	chr7	-	1707	10	NNC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	-742	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	52.2855408098432	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	6038	False	NA	-25	True	AATAAA	-16	NA	30274341	30268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30274121
ES.30557.32	chr7	-	7418	11	NIC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	227	0	intron_retention	FALSE	canonical	3	74	junction_6	30.0434685081467	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	2187	False	NA	-25	True	AATAAA	-16	NA	30278192	30268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30269071_30269182_30269267_30269362_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127
ES.30557.33	chr7	-	3047	9	NNC	ENSMUSG00000006307.17	novel	6345	35	NA	NA	1203	0	intron_retention	FALSE	non_canonical	0	0	junction_1	49.7278531107065	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	4993	False	NA	-25	True	AATAAA	-16	NA	30275386	30268284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268946_30269071_30269182_30269267_30269362_30269471_30269715_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277
ES.30557.39	chr7	-	9364	34	NNC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-295	-1	intron_retention	FALSE	canonical	1	1	junction_2	37.9266364454603	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGTCTTTCCGTG	NA	False	NA	-26	True	AATAAA	-15	NA	30288446	30268285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269066_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30282308_30282608_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.4	chr7	-	8614	37	NNC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-119	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	39.4763075530715	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGTCTTTCCGTGCCTT	NA	False	NA	-22	True	AATAAA	-19	NA	30288270	30268281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286766_30287779
ES.30557.43	chr7	-	8013	31	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-1117	-1	intron_retention	FALSE	canonical	3	47	junction_30	36.4959662915719	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGTGGTCTTTCCGTG	NA	False	NA	-26	True	AATAAA	-15	NA	30285882	30268285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30283622_30283873_30284025_30284117_30284232_30284418
ES.30557.44	chr7	-	8205	37	Fusion	ENSMUSG00000006307.17_ENSMUSG00000006310.11	novel	8469	37	NA	NA	-13	-2	multi-exon	FALSE	canonical	0	0	junction_36	38.6795955396526	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGAGGTGGTCTTTCCGT	NA	False	NA	-27	True	AATAAA	-14	NA	30298307	30268286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30298204
ES.30557.45	chr7	-	3111	4	NIC	ENSMUSG00000006307.17	novel	8454	37	NA	NA	-6	98	intron_retention	FALSE	canonical	3	32	junction_3	6.12825877028341	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGACTGAGAGTGTCCC	NA	False	NA	NA	False	AATAGA	-14	NA	30288157	30283607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.46	chr7	-	1625	3	ISM	ENSMUSG00000006307.17	ENSMUST00000108154.9	8454	37	1	16991	1	-1568	5prime_fragment	FALSE	canonical	3	32	junction_2	3.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTGAGTGCTCGCTC	NA	False	NA	NA	False	AATATA	-16	NA	30288150	30285273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30286455_30286679_30286753_30287779
ES.30557.47	chr7	-	6620	2	ISM	ENSMUSG00000006310.11	ENSMUST00000108150.2	854	4	2421	-2	2421	0	intron_retention	FALSE	canonical	3	83	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30295873	30289105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30289633_30289780
ES.30557.48	chr7	-	2374	2	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	42	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298293	30289105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30291391_30298204
ES.30557.49	chr7	-	1017	5	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.8196618669971	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298348	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30289633_30289780_30289985_30290057_30290127_30290220_30290295_30298204
ES.30557.5	chr7	-	6844	13	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	480	0	intron_retention	FALSE	canonical	3	74	junction_9	37.1919756877146	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	2440	False	NA	-23	True	AATAAA	-18	NA	30277939	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907
ES.30557.50	chr7	-	1801	4	NNC	ENSMUSG00000006310.11	novel	854	4	NA	NA	0	-1	intron_retention	FALSE	canonical	2	8	junction_2	30.6630432642003	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298294	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30289633_30289780_30290295_30290719_30291391_30298204
ES.30557.51	chr7	-	2194	3	NIC	ENSMUSG00000006310.11	novel	854	4	NA	NA	32	-1	intron_retention	FALSE	canonical	3	42	junction_2	20.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298262	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30291391_30298204
ES.30557.52	chr7	-	9188	1	Genic_Genomic	ENSMUSG00000006310.11	novel	NA	NA	NA	NA	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298294	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_30289100_30298300
ES.30557.53	chr7	-	2154	4	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	42	junction_3	19.5675468285856	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298334	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290057_30291391_30298204
ES.30557.54	chr7	-	1490	6	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.8779561408552	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298294	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290824_30291391_30298204
ES.30557.55	chr7	-	1037	4	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-3901	-1	intron_retention	FALSE	canonical	2	4	junction_3	36.8057966449127	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30302235	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30289946_30290057_30290127_30290220_30290295_30302180
ES.30557.56	chr7	-	1881	6	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	21.6277599394852	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298342	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30298204
ES.30557.57	chr7	-	988	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298358	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
ES.30557.58	chr7	-	1794	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	28.8140590684478	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298324	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290220_30290295_30290481_30291391_30298204
ES.30557.59	chr7	-	2070	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	42	junction_4	17.5267652463311	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298344	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30291391_30298204
ES.30557.6	chr7	-	6922	32	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-15	0	intron_retention	FALSE	canonical	3	47	junction_31	35.4918759299073	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30284780	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30283181_30283341_30284025_30284117_30284232_30284418
ES.30557.60	chr7	-	855	4	FSM	ENSMUSG00000006310.11	ENSMUST00000108150.2	854	4	0	-1	0	-1	multi-exon	FALSE	canonical	1	2	junction_2	35.0269737329517	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30298294	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30289633_30289780_30289946_30290220_30290295_30298204
ES.30557.61	chr7	-	1825	6	NNC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	-3928	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	30.7076537690524	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGTCCAGACTTTTC	NA	False	NA	-1	True	AATAAA	-19	NA	30302262	30289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30302180
ES.30557.62	chr7	-	6242	3	ISM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	-3243	3	2684	-1	intron_retention	FALSE	canonical	3	83	junction_1	0.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGACGAGTCCAGACTTT	NA	False	NA	-3	True	AATAAA	-17	NA	30295610	30289108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30289633_30289780_30289946_30290057
ES.30557.63	chr7	-	1959	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	6	-1	intron_retention	FALSE	canonical	3	35	junction_3	22.6384628453435	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGACGAGTCCAGACTTT	NA	False	NA	-3	True	AATAAA	-17	NA	30298328	30289108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30289633_30289780_30289946_30290057_30290295_30290481_30291391_30298204
ES.30557.7	chr7	-	8582	36	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	-19	0	intron_retention	FALSE	canonical	3	32	junction_35	37.4530345355135	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288170	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ES.30557.9	chr7	-	6665	11	NIC	ENSMUSG00000006307.17	novel	8469	37	NA	NA	11	0	intron_retention	FALSE	canonical	3	88	junction_10	31.3662238721846	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	3801	False	NA	-23	True	AATAAA	-18	NA	30276578	30268282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276378_30276455
ES.30558.2	chr7	-	1327	7	NNC	ENSMUSG00000006313.6	novel	1421	8	NA	NA	2790	7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	11.4661337085446	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGCTTGTTCTGTTCT	4697	False	NA	-1	True	AATAAA	-17	NA	30309482	30302509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30309038_30309240_30309361
ES.30558.3	chr7	-	1059	6	NNC	ENSMUSG00000006313.6	novel	1421	8	NA	NA	4002	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	13.4104436913922	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGAGCTTGTTCTGTT	5909	False	NA	-3	True	AATAAA	-15	NA	30308270	30302511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30308214
ES.30559.1	chr7	+	178	1	Intergenic	novelGene_25194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	4465	False	NA	NA	False	NA	NA	NA	30319305	30319483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30319300_30319500
ES.3056.1	chr10	-	153	1	Intergenic	novelGene_2386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	69979850	69979697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_69979700_69979800
ES.30560.1	chr7	-	557	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	-50	111	-50	2	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTGTGTATTACACAG	NA	False	NA	-2	True	AATAAA	-20	NA	30325626	30316396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
ES.30560.4	chr7	-	484	4	NNC	ENSMUSG00000036751.8	novel	618	4	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2842.01806233998	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	-4	True	AATAAA	-18	NA	30325558	30316398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30316581_30322835_30322941_30323924_30324039_30325475
ES.30560.5	chr7	-	413	4	NNC	ENSMUSG00000036751.8	novel	618	4	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	79	junction_1	2804.95755563055	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTCACATTGTGTGT	NA	False	NA	-11	True	AATAAA	-11	NA	30325538	30316405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30316588_30322886_30322941_30323924_30324039_30325475
ES.30560.6	chr7	-	3145	3	FSM	ENSMUSG00000036751.8	ENSMUST00000207851.2	369	3	7	-2783	7	2783	multi-exon	FALSE	canonical	3	5660	junction_2	340	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	30325532	30319966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30322941_30323924_30324039_30325475
ES.30560.7	chr7	-	175	1	Intergenic	novelGene_25195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTTGATTCAG	NA	False	NA	NA	False	NA	NA	NA	30323629	30323454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30323500_30323600
ES.30561.1	chr7	+	176	1	Intergenic	novelGene_25196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	4557	False	NA	NA	False	NA	NA	NA	30327119	30327295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30327100_30327300
ES.30562.1	chr7	-	686	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	894	-8	894	8	3prime_fragment	FALSE	canonical	3	44	junction_1	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCGTGTCTGGTGTCT	NA	False	NA	NA	False	AATAAA	-26	NA	30334383	30333032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30333260_30333413_30333527_30334037
ES.30562.2	chr7	-	234	1	Genic_Genomic	ENSMUSG00000006311.9	novel	NA	NA	NA	NA	2010	7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGCGTGTCTGGTGTC	NA	False	NA	NA	False	AATAAA	-25	NA	30333267	30333033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_30333000_30333300
ES.30563.1	chr7	+	1401	2	Antisense	novelGene_ENSMUSG00000094365.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTATTTTGTTGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	30349819	30352562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_30349885_30351226
ES.30564.1	chr7	-	1628	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	-98	-4	75	4	multi-exon	TRUE	canonical	3	345	junction_5	209.790818435889	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGACTTAGAAACTGTTG	3686	False	NA	-8	True	AATAAA	-22	NA	30349667	30340419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ES.30564.10	chr7	-	1612	8	NIC	ENSMUSG00000036733.17	novel	1526	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	345	junction_5	223.037381327408	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	3791	False	NA	-15	True	AATAAA	-15	NA	30349562	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347241_30349008_30349145_30349362
ES.30564.12	chr7	-	3633	27	NIC	ENSMUSG00000094365.2	novel	3821	25	NA	NA	-32	-1	intron_retention	FALSE	canonical	1	2	junction_10	352.679978393675	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	NA	False	NA	-15	True	AATAAA	-15	NA	30364394	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.13	chr7	-	3527	27	NIC	ENSMUSG00000094365.2	novel	3821	25	NA	NA	-9	-2	intron_retention	FALSE	canonical	1	2	junction_10	351.196610421567	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCTGACTGGACTTAGA	NA	False	NA	-16	True	AATAAA	-14	NA	30364371	30340427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.14	chr7	-	3451	27	NNC	ENSMUSG00000094365.2	novel	3821	25	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_10	358.859363678041	574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCTGACTGGACTTAGA	NA	False	NA	-16	True	AATAAA	-14	NA	30364361	30340427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356438_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.16	chr7	-	4576	3	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	-1767	1226	intron_retention	FALSE	canonical	3	954	junction_2	37	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAACTAAACCAAAAAA	6174	False	NA	NA	False	NA	NA	NA	30347179	30342298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30344042_30344250_30347060_30347155
ES.30564.17	chr7	-	172	1	Intergenic	novelGene_25197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGCCAATATTTTGTT	3080	False	NA	NA	False	NA	NA	NA	30350273	30350101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30350100_30350300
ES.30564.18	chr7	-	2211	4	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	623	577	intron_retention	FALSE	canonical	1	2	junction_3	95.5487077649696	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATGAGAGGTTTATTT	5349	False	NA	NA	False	NA	NA	NA	30357764	30352558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353728_30356373_30356504_30356586_30356699_30356964
ES.30564.19	chr7	-	2861	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-15	3	intron_retention	FALSE	canonical	3	112	junction_10	38.8660704030061	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGTTTTATCAACTT	NA	False	NA	-1	True	AATAAA	-18	NA	30364400	30353132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.2	chr7	-	3803	25	NIC	ENSMUSG00000094365.2	novel	3821	25	NA	NA	3	6	intron_retention	FALSE	canonical	1	2	junction_10	358.308787919024	574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGACTTAGAAACTGTTG	NA	False	NA	-8	True	AATAAA	-22	NA	30364359	30340419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.20	chr7	-	2407	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	8	2	intron_retention	FALSE	canonical	3	112	junction_11	35.9903958543109	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCAGTTTTATCAACT	NA	False	NA	-2	True	AATAAA	-17	NA	30364377	30353133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.21	chr7	-	2372	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	0	intron_retention	FALSE	canonical	3	112	junction_12	35.9706724062312	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364412	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.22	chr7	-	3527	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	0	intron_retention	FALSE	canonical	3	138	junction_15	27.5538535190634	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364374	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.23	chr7	-	2533	19	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-932	0	intron_retention	FALSE	canonical	0	0	junction_18	58.3028491775678	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30365351	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255_30364528_30365211
ES.30564.24	chr7	-	3582	13	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	6	0	intron_retention	FALSE	canonical	3	112	junction_7	38.5677614364928	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364379	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.25	chr7	-	2288	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	0	intron_retention	FALSE	canonical	1	1	junction_10	57.9951674397685	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364374	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359491_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.26	chr7	-	3804	11	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-3	0	intron_retention	FALSE	canonical	3	112	junction_5	38.8592331370551	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364361	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.27	chr7	-	5880	11	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	0	intron_retention	FALSE	canonical	3	112	junction_6	42.5985915260118	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364374	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30356504_30356586_30357344_30357927_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.28	chr7	-	5127	15	NIC	ENSMUSG00000078762.11	novel	2070	19	NA	NA	10	0	intron_retention	FALSE	canonical	1	1	junction_2	65.2308303219405	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364409	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30356443_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.29	chr7	-	2450	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	112	junction_11	34.8009967529667	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364389	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.3	chr7	-	3377	9	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	7	3	intron_retention	FALSE	canonical	3	640	junction_5	140.358246996748	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGACTTAGAAACTGTT	3791	False	NA	-9	True	AATAAA	-21	NA	30349562	30340420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30349145_30349362
ES.30564.30	chr7	-	2192	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	0	-5	0	0	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364419	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.31	chr7	-	2648	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	112	junction_9	34.8715573240439	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364415	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.32	chr7	-	2703	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	0	intron_retention	FALSE	canonical	3	112	junction_9	38.145799779482	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364374	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.33	chr7	-	2439	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	112	junction_11	36.9805164072921	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364386	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.34	chr7	-	2202	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	59.5326086098138	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364361	30353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358045_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.35	chr7	-	2209	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-1	2	intron_retention	FALSE	canonical	3	112	junction_13	35.4083445680803	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTGCCCAGTTTTAT	NA	False	NA	-7	True	AATAAA	-12	NA	30364359	30353138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.36	chr7	-	2092	19	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	57.5321702813648	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTGCCCAGTTTTAT	NA	False	NA	-7	True	AATAAA	-12	NA	30364388	30353138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356438_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.38	chr7	-	2973	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	2	intron_retention	FALSE	canonical	3	112	junction_9	38.1872400956452	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTGCCCAGTTTTAT	NA	False	NA	-7	True	AATAAA	-12	NA	30364415	30353138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30357170_30357262_30357344_30357927_30358409_30358487_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.39	chr7	-	3990	8	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-1875	0	intron_retention	FALSE	canonical	3	112	junction_7	38.0917260285844	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	958	False	NA	-9	True	AATAAA	-10	NA	30362155	30353140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30359023_30359518_30359602_30359683_30359754_30361053
ES.30564.4	chr7	-	3183	9	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	640	junction_5	113.634213047832	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3787	False	NA	-14	True	AATAAA	-16	NA	30349566	30340425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30347060_30347155_30347241_30349008_30349145_30349362
ES.30564.40	chr7	-	2426	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_4	59.5009231994907	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	NA	False	NA	-9	True	AATAAA	-10	NA	30364412	30353140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30356964_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.41	chr7	-	2133	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.9272915858594	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364362	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361410_30362499_30362553_30362647_30362711_30364255
ES.30564.42	chr7	-	2726	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	112	junction_9	36.726026471811	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364371	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.43	chr7	-	3177	13	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_11	65.5373091367725	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364412	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361445_30362647_30362711_30364255
ES.30564.44	chr7	-	2653	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_12	56.5053202014878	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364415	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30360768_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.45	chr7	-	2030	17	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	61.652472324717	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364374	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361235_30362519_30362553_30362647_30362711_30364255
ES.30564.46	chr7	-	2176	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.9272915858594	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364412	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361423_30362519_30362553_30362647_30362711_30364255
ES.30564.47	chr7	-	2199	18	NNC	ENSMUSG00000078762.11	novel	2070	19	NA	NA	11	-2	intron_retention	FALSE	canonical	1	1	junction_3	72.7341939927745	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364374	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356443_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359491_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.48	chr7	-	3800	13	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	15	junction_4	63.0944508037135	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364394	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357341_30357927_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.49	chr7	-	2173	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.9272915858594	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364415	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361417_30362519_30362553_30362647_30362711_30364255
ES.30564.5	chr7	-	3259	8	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	951	junction_6	27.8765500163906	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	3786	False	NA	-15	True	AATAAA	-15	NA	30349567	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30347060_30347155_30347241_30349008_30349145_30349362
ES.30564.50	chr7	-	2312	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_5	59.9376839021754	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364378	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357146_30357257_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.51	chr7	-	2531	16	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	13	-2	intron_retention	FALSE	canonical	3	112	junction_10	36.5193403859136	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364406	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.52	chr7	-	2176	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	59.9272915858594	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364424	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361411_30362519_30362553_30362647_30362711_30364255
ES.30564.54	chr7	-	2414	16	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	63.7403064525632	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364374	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361410_30362510_30362553_30362647_30362711_30364255
ES.30564.55	chr7	-	2141	16	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_15	61.2534262080271	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364378	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30364255
ES.30564.56	chr7	-	2238	20	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	69.7886798398925	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364415	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30363221_30363279_30364255
ES.30564.57	chr7	-	2241	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	10	-2	intron_retention	FALSE	canonical	1	2	junction_3	73.0551292046916	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364375	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356438_30356586_30356699_30357023_30357149_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.58	chr7	-	2300	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	112	junction_12	36.3694153788592	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364361	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.59	chr7	-	2172	18	NIC	ENSMUSG00000078762.11	novel	2070	19	NA	NA	11	-2	intron_retention	FALSE	canonical	1	1	junction_3	59.3865409472108	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364374	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356443_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.6	chr7	-	1618	10	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	302.146681735793	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	3755	False	NA	-15	True	AATAAA	-15	NA	30349598	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ES.30564.60	chr7	-	2342	19	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	71.6319683443704	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364362	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30356964_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362870_30364259
ES.30564.62	chr7	-	2530	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-2	intron_retention	FALSE	canonical	3	112	junction_11	36.0532917186489	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364415	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.63	chr7	-	2090	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	85.5078458125436	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364406	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353726_30356373_30356438_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361411_30362519_30362553_30362647_30362711_30364255
ES.30564.64	chr7	-	1977	20	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.7478751112312	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364374	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353246_30353408_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.65	chr7	-	1964	6	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-239	-2	intron_retention	FALSE	canonical	3	183	junction_2	17.0364315512375	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	4487	False	NA	-11	True	AATAAA	-8	NA	30358626	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30357170_30357262_30357344_30357927
ES.30564.66	chr7	-	5181	15	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	10	-2	intron_retention	FALSE	canonical	3	112	junction_9	38.8967760061611	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364375	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.67	chr7	-	2313	18	NNC	ENSMUSG00000078762.11	novel	2070	19	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	1	junction_3	73.8830086145503	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364362	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356443_30356586_30356699_30356964_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.68	chr7	-	2138	19	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	58.1943582603446	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364378	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361208_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.69	chr7	-	2677	15	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_14	61.448543264977	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364394	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364259
ES.30564.70	chr7	-	2471	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	15	-2	intron_retention	FALSE	canonical	3	112	junction_11	36.8304816015213	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364404	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.71	chr7	-	2226	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	74.758017935702	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364415	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30356964_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361411_30362519_30362553_30362647_30362711_30364255
ES.30564.72	chr7	-	2235	19	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	82.497007053829	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCACTGCCCAGTT	NA	False	NA	-11	True	AATAAA	-8	NA	30364419	30353142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361418_30362519_30362553_30362647_30362711_30363221_30363279_30364255
ES.30564.73	chr7	-	2229	18	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	4	-3	intron_retention	FALSE	canonical	1	1	junction_6	59.7493611611836	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGCACTGCCCAGT	NA	False	NA	-12	True	AATAAA	-7	NA	30364415	30353143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358047_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.75	chr7	-	5708	12	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	112	junction_7	40.281447855338	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGCACTGCCCAGT	NA	False	NA	-12	True	AATAAA	-7	NA	30364371	30353143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30353481_30353594_30356504_30356586_30357344_30357927_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.76	chr7	-	2533	16	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	63.7403064525632	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAAAGCACTGCCCAG	NA	False	NA	-13	True	AATAAA	-6	NA	30364359	30353144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361417_30362519_30362553_30362647_30362711_30364255
ES.30564.77	chr7	-	2427	17	NNC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	11	1413	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	61.1402077196341	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTGTTGTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	30364374	30355571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358047_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ES.30564.8	chr7	-	1515	9	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	308.813227331667	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	3813	False	NA	-15	True	AATAAA	-15	NA	30349540	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ES.30564.9	chr7	-	1215	6	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	-1614	-1	intron_retention	FALSE	canonical	3	25	junction_4	373.838788784685	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	6327	False	NA	-15	True	AATAAA	-15	NA	30347026	30340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30345343_30345410_30346984
ES.30565.1	chr7	-	177	1	Intergenic	novelGene_25198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTAAATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	30365944	30365767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30365800_30365900
ES.30566.1	chr7	-	185	1	Intergenic	novelGene_25199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATGGATCAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	30377779	30377594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30377600_30377800
ES.30567.1	chr7	+	3890	8	NIC	ENSMUSG00000005553.15	novel	3485	22	NA	NA	-221	-4	intron_retention	FALSE	canonical	1	1	junction_1	1.03015750727543	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTGTTTAACAGTACG	1310	False	NA	NA	False	AATAAA	-25	NA	30417035	30424955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_30417309_30419417_30419555_30419641_30419793_30419891_30422041_30422344_30422491_30423617_30424185_30424279_30424372_30424580
ES.30568.1	chr7	+	1352	4	ISM	ENSMUSG00000097320.9	ENSMUST00000180820.8	1276	6	12	9439	12	-1009	5prime_fragment	FALSE	canonical	2	5	junction_1	4.18993502999218	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAGTCTTAAAGATGAG	538	False	NA	NA	False	AATACA	-16	NA	30429015	30435915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240
ES.30568.2	chr7	+	829	4	ISM	ENSMUSG00000097320.9	ENSMUST00000180820.8	1276	6	17	9957	17	-1527	5prime_fragment	FALSE	canonical	2	5	junction_1	4.18993502999218	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTATGCTGTTTTGT	543	False	NA	NA	False	NA	NA	NA	30429020	30435397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240
ES.30568.3	chr7	+	1081	7	Fusion	ENSMUSG00000097320.9_ENSMUSG00000046056.16	novel	1276	6	NA	NA	41	-1	multi-exon	FALSE	canonical	1	1	junction_4	6.02771377334171	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGGCTCACTGTGCTTC	567	False	NA	21	True	AATAAA	-23	NA	30429044	30455558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
ES.30569.1	chr7	-	1420	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	46	-596	13	592	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTGTGTGGGGGTTGG	9303	False	NA	NA	False	ATTAAA	-19	NA	30428919	30426533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.10	chr7	-	1127	4	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	8	-1	intron_retention	FALSE	canonical	3	797	junction_2	0.816496580927726	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTATGTCCATCTC	9298	False	NA	-15	True	AGTAAA	-15	NA	30428924	30427128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427534_30427629_30427994_30428081_30428142_30428626
ES.30569.11	chr7	-	846	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207296.2	875	7	24	5	9	-3	multi-exon	FALSE	canonical	3	5	junction_2	290.731118618791	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	9299	False	NA	-19	True	AGTAAA	-11	NA	30428923	30427132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30427329_30427411_30427555_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.12	chr7	-	1098	4	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	2	-3	intron_retention	FALSE	canonical	3	791	junction_1	3.09120616516523	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	9277	False	NA	-19	True	AGTAAA	-11	NA	30428945	30427132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427715_30427856_30427994_30428081_30428142_30428626
ES.30569.13	chr7	-	1696	2	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	16	-3	intron_retention	FALSE	canonical	3	797	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	9306	False	NA	-19	True	AGTAAA	-11	NA	30428916	30427132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427994_30428081
ES.30569.14	chr7	-	1142	4	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	13	-3	intron_retention	FALSE	canonical	3	739	junction_3	27.5801861245835	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	9303	False	NA	-19	True	AGTAAA	-11	NA	30428919	30427132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.15	chr7	-	752	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	315.41616952845	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	9302	False	NA	-19	True	AGTAAA	-11	NA	30428920	30427132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428768
ES.30569.16	chr7	-	1612	3	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	16	-4	intron_retention	FALSE	canonical	3	791	junction_1	3	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTTTTTGTTATGTCC	9306	False	NA	-20	True	AGTAAA	-10	NA	30428916	30427133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427329_30427411_30427994_30428081
ES.30569.17	chr7	-	1044	5	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	25	-6	intron_retention	FALSE	canonical	3	739	junction_4	24.5395089600424	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGTTTTTGTTATGT	9315	False	NA	-22	True	AGTAAA	-8	NA	30428907	30427135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427329_30427411_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.18	chr7	-	935	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	739	junction_5	22.5530485744167	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGGTTTTTGTTATGT	9274	False	NA	-22	True	AGTAAA	-8	NA	30428948	30427135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30428142_30428626_30428697_30428768
ES.30569.2	chr7	-	890	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	-16	-4	-16	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9241	False	NA	-12	True	AGTAAA	-18	NA	30428981	30427125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.4	chr7	-	925	6	NIC	ENSMUSG00000006315.10	novel	870	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	739	junction_5	23.0685933684739	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9289	False	NA	-12	True	AGTAAA	-18	NA	30428933	30427125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ES.30569.5	chr7	-	1532	4	NIC	ENSMUSG00000006315.10	novel	875	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	739	junction_3	26.0426999794995	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	9263	False	NA	-12	True	AGTAAA	-18	NA	30428959	30427125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30427715_30427856_30427994_30428081_30428697_30428768
ES.30569.6	chr7	-	898	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207263.2	835	7	-31	-32	0	0	multi-exon	FALSE	canonical	2	2	junction_5	291.92945304569	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATGTCCATCTCTC	9257	False	NA	-13	True	AGTAAA	-17	NA	30428965	30427126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428167_30428626_30428697_30428768
ES.30569.7	chr7	-	1260	3	NIC	ENSMUSG00000006315.10	novel	537	5	NA	NA	4	0	intron_retention	FALSE	canonical	3	739	junction_2	29.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATGTCCATCTCTC	9279	False	NA	-13	True	AGTAAA	-17	NA	30428943	30427126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30428142_30428626_30428697_30428768
ES.30569.9	chr7	-	1595	5	ISM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	-167	-1	-167	-1	intron_retention	FALSE	canonical	3	791	junction_1	3.57071421427143	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTATGTCCATCTC	9090	False	NA	-15	True	AGTAAA	-15	NA	30429132	30427128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081
ES.3057.1	chr10	-	1826	1	Antisense	novelGene_ENSMUSG00000048701.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGACTGTACCATGAAGG	NA	False	NA	NA	False	NA	NA	NA	70028827	70027001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_70027000_70028800
ES.30570.1	chr7	+	676	6	ISM	ENSMUSG00000060962.13	ENSMUST00000041703.10	662	7	1086	9	1086	-4	3prime_fragment	FALSE	canonical	1	1	junction_1	1.16619037896906	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCTGAGACTCTCTTG	NA	False	NA	NA	False	AATAAA	-13	NA	30476911	30480479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_30477081_30477186_30477235_30477625_30477695_30479102_30479130_30479257_30479306_30480164
ES.30571.1	chr7	+	4016	3	FSM	ENSMUSG00000074199.8	ENSMUST00000190589.7	369	3	-3647	0	-1741	0	multi-exon	FALSE	canonical	3	54	junction_2	12	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCTGAATCTGTGTT	NA	False	NA	11	True	AATAAA	-16	NA	30485579	30490510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30489382_30489992_30490041_30490344
ES.30571.2	chr7	+	455	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	1	14	1	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCCTGAATCTGTG	NA	False	NA	9	True	AATAAA	-14	NA	30487330	30490508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
ES.30571.3	chr7	+	379	5	NNC	ENSMUSG00000074199.8	novel	470	6	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.0926036220835	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCCTGAATCTGTG	NA	False	NA	9	True	AATAAA	-14	NA	30487388	30490508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30487460_30489128_30489180_30489336_30489382_30489992_30490041_30490344
ES.30571.4	chr7	+	482	6	NNC	ENSMUSG00000074199.8	novel	369	3	NA	NA	-546	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5312954196182	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCCTGAATCTGTG	NA	False	NA	9	True	AATAAA	-14	NA	30488680	30490508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30488825_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
ES.30572.1	chr7	-	2181	3	NIC	ENSMUSG00000051314.12	novel	2301	3	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCACGGGTTTTGGC	3205	False	NA	NA	False	AATAAA	-20	NA	30523256	30517775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30519540_30520101_30520164_30522901
ES.30572.2	chr7	-	2332	2	ISM	ENSMUSG00000051314.12	ENSMUST00000053156.10	2301	3	2704	3	67	-3	3prime_fragment	FALSE	canonical	1	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCACGGGTTTTGGC	5965	False	NA	NA	False	AATAAA	-20	NA	30520496	30517775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30519713_30520101
ES.30572.3	chr7	-	2156	3	NNC	ENSMUSG00000051314.12	novel	1913	3	NA	NA	-826	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAAATGTTCACGGGT	4562	False	NA	NA	False	AATAAA	-14	NA	30521899	30517781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30519540_30520101_30520164_30521563
ES.30572.4	chr7	-	1150	1	ISM	ENSMUSG00000051314.12	ENSMUST00000053156.10	2301	3	3856	422	1058	346	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGGAAATGCCACCTA	7117	False	NA	NA	False	AATAAA	-17	NA	30519344	30518194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30518200_30519300
ES.30572.5	chr7	-	1537	3	NIC	ENSMUSG00000051314.12	novel	2301	3	NA	NA	-50	127	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	3211	False	NA	NA	False	NA	NA	NA	30523250	30518413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30519540_30520101_30520164_30522901
ES.30573.1	chr7	+	1573	3	Intergenic	novelGene_25200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCGAGTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	30525559	30528768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30525681_30525896_30526050_30527469
ES.30573.2	chr7	+	2787	3	Intergenic	novelGene_25201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCCTTGTGTCGAGTC	NA	False	NA	NA	False	NA	NA	NA	30525568	30528762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30525681_30525896_30526050_30526240
ES.30573.3	chr7	+	1912	2	Intergenic	novelGene_25202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTGTTTGTTCGT	NA	False	NA	NA	False	NA	NA	NA	30528750	30530705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30530493_30530535
ES.30573.4	chr7	+	126	1	Intergenic	novelGene_25203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	30529187	30529313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30529200_30529300
ES.30573.5	chr7	+	1329	2	Antisense	novelGene_ENSMUSG00000044453.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACCGGGTCTTGCATA	NA	False	NA	NA	False	NA	NA	NA	30530627	30566303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_30530844_30565190
ES.30573.6	chr7	+	3788	2	Intergenic	novelGene_25204	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTGTTTGTTCGTGA	NA	False	NA	31	True	NA	NA	NA	30530712	30534735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_30531143_30531377
ES.30573.7	chr7	+	2609	2	Antisense	novelGene_ENSMUSG00000019429.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGAGTCTGCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	30547032	30556303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_30547097_30553758
ES.30574.1	chr7	-	1789	1	FSM	ENSMUSG00000019429.8	ENSMUST00000185748.2	1234	1	60	-615	60	11	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTCCTTATCTCCTT	7737	False	NA	NA	False	AATAAA	-24	NA	30555532	30553743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30553700_30555500
ES.30574.2	chr7	-	2165	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	-539	-1	-539	1	multi-exon	FALSE	canonical	3	35	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAATAATGTTTCC	7127	False	NA	NA	False	AATAAA	-14	NA	30556142	30553753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30555330_30555553
ES.30575.1	chr7	-	1174	4	ISM	ENSMUSG00000030577.15	ENSMUST00000189718.7	3672	13	10532	0	5502	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTTTGTATTGGTGAT	NA	False	NA	NA	False	ATTAAA	-21	NA	30567342	30565253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30566088_30566442_30566528_30566886_30567006_30567206
ES.30576.1	chr7	-	172	1	Intergenic	novelGene_25205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATCTCCCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	30568255	30568083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30568100_30568300
ES.30577.1	chr7	+	2669	2	NNC	ENSMUSG00000101029.2	novel	509	2	NA	NA	-700	1598	intron_retention	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAATCAGTATATCACA	6036	False	NA	NA	False	ATTAAA	-14	NA	30571457	30574356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30573585_30573814
ES.30578.1	chr7	+	4042	2	NNC	ENSMUSG00000100029.2	novel	928	2	NA	NA	-3650	-811	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAACACTTCAA	NA	False	NA	NA	False	NA	NA	NA	30580805	30585060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_30581905_30582117
ES.30578.2	chr7	+	632	2	FSM	ENSMUSG00000100029.2	ENSMUST00000189744.2	928	2	270	26	270	-26	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	30584725	30585845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_30585156_30585643
ES.30579.1	chr7	-	2600	12	NIC	ENSMUSG00000036634.16	novel	2419	12	NA	NA	-185	0	intron_retention	FALSE	canonical	0	0	junction_2	2.15130173930895	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAGTCTAGACCCAT	6421	False	NA	NA	False	AATAAA	-13	NA	30614483	30598607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611389_30612248_30612305_30614243
ES.30579.2	chr7	-	1545	7	NIC	ENSMUSG00000036634.16	novel	2434	13	NA	NA	-48	759	intron_retention	FALSE	canonical	1	1	junction_2	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTGTTTCGGTGTTGT	6558	False	NA	NA	False	NA	NA	NA	30614346	30606202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611389_30612248_30612305_30614243
ES.3058.1	chr10	-	182	1	Intergenic	novelGene_2387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGATTGCAAAC	NA	False	NA	NA	False	NA	NA	NA	70074736	70074554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70074600_70074700
ES.30580.1	chr7	-	2520	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-105	4	-105	0	multi-exon	TRUE	canonical	3	69	junction_9	26.650458036969	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTGTCTTTGGCCTT	8659	False	NA	NA	False	NA	NA	NA	30656333	30644676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
ES.30580.11	chr7	-	1346	8	NNC	ENSMUSG00000058239.14	novel	994	9	NA	NA	-126	580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	47.2816139784606	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTGTGTCCATGTT	8638	False	NA	-6	True	AATAAA	-24	NA	30656354	30645418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655321_30656302
ES.30580.12	chr7	-	2456	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-784	747	-784	579	multi-exon	FALSE	canonical	3	69	junction_9	26.650458036969	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGTGTGTCCATGT	7980	False	NA	-7	True	AATAAA	-23	NA	30657012	30645419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
ES.30580.13	chr7	-	1630	10	NNC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	1	578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.6638517567672	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	8802	False	NA	-8	True	AATAAA	-22	NA	30656190	30645420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646095_30646175_30646298_30646385_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
ES.30580.15	chr7	-	5876	2	ISM	ENSMUSG00000058239.14	ENSMUST00000169496.8	532	5	3494	-755	3494	578	3prime_fragment	FALSE	canonical	3	129	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	8875	False	NA	-8	True	AATAAA	-22	NA	30651381	30645420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30646305_30646389
ES.30580.16	chr7	-	1472	8	NIC	ENSMUSG00000058239.14	novel	849	9	NA	NA	-51	576	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	54.9166344079267	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTCTGTGTGTCCA	8713	False	NA	-10	True	AATAAA	-20	NA	30656279	30645422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655573_30655693_30656120
ES.30580.18	chr7	-	4112	1	Genic_Genomic	ENSMUSG00000001247.17	novel	NA	NA	NA	NA	12096	655	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAAGTCGCGGCGGCGGC	4341	False	NA	NA	False	NA	NA	NA	30660651	30656539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_30656500_30660700
ES.30580.19	chr7	-	5596	8	NNC	ENSMUSG00000001247.17	novel	2021	10	NA	NA	109	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	67.7995244098665	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCTTGTTTTGCTGCA	NA	False	NA	0	True	AATAAA	-20	NA	30672638	30657196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658470_30658577_30658740_30661522_30665514_30671292_30671638_30672504
ES.30580.2	chr7	-	2968	8	NNC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	-153	-11	intron_retention	FALSE	canonical	1	4	junction_6	44.8280160213249	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGAACCCTG	8611	False	NA	NA	False	NA	NA	NA	30656381	30644687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30655426_30655573_30655664_30655806_30655854_30656120
ES.30580.20	chr7	-	2151	10	FSM	ENSMUSG00000001247.17	ENSMUST00000001279.15	2167	10	15	1	15	-1	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGCCTCTTGTTTTGC	NA	False	NA	-4	True	AATAAA	-16	NA	30672874	30657200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
ES.30580.21	chr7	-	2161	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	-89	-1	-52	-1	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGCCTCTTGTTTTGC	NA	False	NA	-4	True	AATAAA	-16	NA	30672941	30657200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
ES.30580.22	chr7	-	4383	6	NIC	ENSMUSG00000001247.17	novel	2071	9	NA	NA	7013	-1	intron_retention	FALSE	canonical	3	93	junction_5	42.804672642131	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGCCTCTTGTTTTGC	5912	False	NA	-4	True	AATAAA	-16	NA	30665734	30657200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30661670_30665393
ES.30580.23	chr7	-	2993	11	NNC	ENSMUSG00000001247.17	novel	2167	10	NA	NA	-743	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.6753455664479	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGCCTCTTGTTTTGC	NA	False	NA	-4	True	AATAAA	-16	NA	30673632	30657200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30668589_30668674_30671292_30671638_30672504
ES.30580.24	chr7	-	4989	9	NIC	ENSMUSG00000001247.17	novel	2021	10	NA	NA	133	0	intron_retention	FALSE	canonical	3	84	junction_6	37.0268061679643	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAAGCCTCTTGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	30672614	30657203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30665514_30671292_30671638_30672504
ES.30580.27	chr7	-	1918	8	FSM	ENSMUSG00000001247.17	ENSMUST00000098553.11	1930	8	3	9	3	0	multi-exon	FALSE	canonical	0	0	junction_5	67.6955971799571	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAAGCCTCTTGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	30672848	30657203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30665393_30665514_30671292_30671638_30672504
ES.30580.28	chr7	-	1488	9	NNC	ENSMUSG00000001247.17	novel	2167	10	NA	NA	7261	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	82.7375368257963	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATCTAAGCCTCTTGT	6160	False	NA	-9	True	AATAAA	-11	NA	30665486	30657205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30663348_30663433_30665393
ES.30580.3	chr7	-	2938	7	NIC	ENSMUSG00000058239.14	novel	994	9	NA	NA	-74	-11	intron_retention	FALSE	canonical	2	3	junction_6	49.7817458735853	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGAACCCTG	8690	False	NA	NA	False	NA	NA	NA	30656302	30644687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30655693_30656120
ES.30580.5	chr7	-	2993	7	NIC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	-55	-13	intron_retention	FALSE	canonical	3	69	junction_6	25.5043569262631	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAATGAACCC	8709	False	NA	NA	False	NA	NA	NA	30656283	30644689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30646305_30646389_30646485_30654168_30654228_30654530_30655426_30655573_30655693_30655806_30655854_30656120
ES.30580.6	chr7	-	2118	9	NNC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	-542	582	intron_retention	FALSE	non_canonical	0	0	junction_8	42.2581353114403	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	8222	False	NA	-4	True	AATAAA	-26	NA	30656770	30645416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655864_30656310
ES.30580.7	chr7	-	1724	10	NNC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	-299	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.0707810396236	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	8465	False	NA	-4	True	AATAAA	-26	NA	30656527	30645416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655860_30656376
ES.30580.8	chr7	-	1884	11	NNC	ENSMUSG00000058239.14	novel	2419	10	NA	NA	-280	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.9659614802338	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTCCATGTTGG	8484	False	NA	-4	True	AATAAA	-26	NA	30656508	30645416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120_30656392_30656462
ES.30581.1	chr7	-	3899	6	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	884	37478	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.317020245459	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	7744	False	NA	NA	False	NA	NA	NA	30736479	30694668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30698309_30732397_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736452
ES.30581.2	chr7	-	578	5	NNC	ENSMUSG00000009687.15	novel	593	5	NA	NA	901	0	intron_retention	FALSE	canonical	3	7	junction_4	37.2449661028172	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGTCTTCTGTG	7761	False	NA	-7	True	GATAAA	-19	NA	30736462	30732154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736359
ES.30581.3	chr7	-	416	6	NNC	ENSMUSG00000009687.15	novel	500	7	NA	NA	895	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	40.8538859840775	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCTCTGTCTTCTGTG	7755	False	NA	-7	True	GATAAA	-19	NA	30736468	30732154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30732306_30732397_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736435
ES.30582.1	chr7	-	548	7	ISM	ENSMUSG00000057092.13	ENSMUST00000167369.8	2894	8	2965	2366	1213	0	3prime_fragment	FALSE	canonical	0	0	junction_4	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCAGGTGCCAGAGACT	NA	False	NA	NA	False	TATAAA	-14	NA	30773164	30769962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30770146_30770276_30770315_30770586_30770624_30770716_30770792_30771499_30771524_30771605_30771639_30773006
ES.30583.1	chr7	-	4578	11	NIC	ENSMUSG00000001249.15	novel	1830	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	5	junction_8	3.19530906173409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCGTCTACAAACGGA	9122	False	NA	NA	False	AATAAA	-20	NA	30814705	30798149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30802094_30802185_30802352_30802578_30803055_30808389_30808432_30808515_30808618_30810138_30810199_30814102_30814170_30814560
ES.30583.2	chr7	-	1777	14	NNC	ENSMUSG00000001249.15	novel	1830	14	NA	NA	-771	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.09502512437113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTCTCTGCGTCTACA	8341	False	NA	NA	False	AATAAA	-14	NA	30815486	30798155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30814102_30814170_30814560_30814712_30815469
ES.30583.3	chr7	-	4358	11	ISM	ENSMUSG00000001249.15	ENSMUST00000039435.15	1743	13	-1011	6	-50	-2	intron_retention	TRUE	canonical	2	8	junction_5	1.75783958312469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTCTCTGCGTCTACA	9776	False	NA	NA	False	AATAAA	-14	NA	30811433	30798155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515
ES.30583.4	chr7	-	1818	14	FSM	ENSMUSG00000001249.15	ENSMUST00000108102.9	1830	14	6	6	-2	-2	multi-exon	FALSE	canonical	2	5	junction_11	2.8658363092611	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTCTCTGCGTCTACA	9118	False	NA	NA	False	AATAAA	-14	NA	30814709	30798155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30810138_30810199_30814102_30814170_30814560
ES.30584.1	chr7	-	1685	5	FSM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	-183	-1	-24	1	multi-exon	FALSE	canonical	3	16	junction_4	3.69966214673719	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTATTCTCTCATTAACA	NA	False	NA	0	True	AATAAA	-17	NA	30826452	30815947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
ES.30584.2	chr7	-	1364	5	NNC	ENSMUSG00000019194.16	novel	1501	5	NA	NA	523	-1	intron_retention	FALSE	canonical	1	2	junction_4	9.52299847737046	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTATTCTCTCATTAA	NA	False	NA	-2	True	AATAAA	-15	NA	30825746	30815949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30825703
ES.30584.3	chr7	-	1569	6	FSM	ENSMUSG00000019194.16	ENSMUST00000098548.8	1573	6	3	1	3	-1	multi-exon	FALSE	canonical	3	16	junction_5	3.38230690505755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTATTCTCTCATTAA	NA	False	NA	-2	True	AATAAA	-15	NA	30826425	30815949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
ES.30585.1	chr7	-	3572	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	8	921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.1130101324254	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGCTTTGTGACAAAAT	5743	False	NA	NA	False	NA	NA	NA	30850450	30828630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.11	chr7	-	4454	19	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	103.830598620429	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	841	False	NA	-1	True	AATAAA	-15	NA	30855352	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30844418_30853849_30854572_30855260
ES.30585.12	chr7	-	3956	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-334	0	intron_retention	FALSE	canonical	0	0	junction_16	102.228660178727	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	538	False	NA	-1	True	AATAAA	-15	NA	30855655	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291
ES.30585.13	chr7	-	2808	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.7282743933711	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4645	False	NA	-1	True	AATAAA	-15	NA	30851548	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30851261
ES.30585.15	chr7	-	2658	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	93.9552275027127	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5625	False	NA	-1	True	AATAAA	-15	NA	30850568	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835132_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.16	chr7	-	5199	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-305	0	intron_retention	FALSE	canonical	0	0	junction_13	108.350049992297	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	567	False	NA	-1	True	AATAAA	-15	NA	30855626	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855528
ES.30585.17	chr7	-	3806	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.0678906821207	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5749	False	NA	-1	True	AATAAA	-15	NA	30850444	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.18	chr7	-	3809	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-2414	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	96.0619033402753	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	NA	False	NA	-1	True	AATAAA	-15	NA	30845551	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843755_30844719
ES.30585.19	chr7	-	2916	19	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.707800099483	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	889	False	NA	-1	True	AATAAA	-15	NA	30855304	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260
ES.30585.2	chr7	-	3139	19	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-362	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.355251303512	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTACCTGTGGGGTC	510	False	NA	1	True	AATAAA	-17	NA	30855683	30829549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835113_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843060_30843299_30854291_30854572_30855260
ES.30585.20	chr7	-	2769	19	NNC	ENSMUSG00000001248.16	novel	3810	19	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.38638302246	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5713	False	NA	-1	True	AATAAA	-15	NA	30850480	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30845174_30845263_30850320
ES.30585.21	chr7	-	3707	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	2113	0	intron_retention	FALSE	canonical	0	0	junction_15	97.0241392322035	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	7928	False	NA	-1	True	AATAAA	-15	NA	30848265	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30848158
ES.30585.22	chr7	-	4225	19	NNC	ENSMUSG00000001248.16	novel	3810	19	NA	NA	-390	0	intron_retention	FALSE	canonical	0	0	junction_15	110.689993636995	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	482	False	NA	-1	True	AATAAA	-15	NA	30855711	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260_30855423_30855528
ES.30585.23	chr7	-	2854	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.7901229679928	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5611	False	NA	-1	True	AATAAA	-15	NA	30850582	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.25	chr7	-	5394	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-1955	0	intron_retention	FALSE	canonical	0	0	junction_15	75.7633743235403	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	NA	False	NA	-1	True	AATAAA	-15	NA	30845092	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065
ES.30585.26	chr7	-	3131	20	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-348	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	117.189171594726	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	524	False	NA	-1	True	AATAAA	-15	NA	30855669	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832318_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260_30855423_30855528
ES.30585.27	chr7	-	5834	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_14	77.7980291095689	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5811	False	NA	-1	True	AATAAA	-15	NA	30850382	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.28	chr7	-	3844	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_15	93.7759963956662	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4688	False	NA	-1	True	AATAAA	-15	NA	30851505	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30851261
ES.30585.29	chr7	-	3780	18	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_15	73.3332913914109	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5732	False	NA	-1	True	AATAAA	-15	NA	30850461	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842937_30842993_30843081_30843299_30850320
ES.30585.3	chr7	-	4022	18	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	384	1	intron_retention	FALSE	canonical	0	0	junction_15	95.443818507798	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTACCTGTGGGGT	5083	False	NA	0	True	AATAAA	-16	NA	30851110	30829550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320_30850586_30850954
ES.30585.30	chr7	-	4682	17	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_15	95.3205119583398	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5739	False	NA	-1	True	AATAAA	-15	NA	30850454	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.31	chr7	-	6927	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-341	0	intron_retention	FALSE	canonical	0	0	junction_14	91.5623406331567	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	531	False	NA	-1	True	AATAAA	-15	NA	30855662	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291
ES.30585.33	chr7	-	4424	17	NIC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-23	0	intron_retention	FALSE	canonical	3	189	junction_16	35.1998202232625	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5712	False	NA	-1	True	AATAAA	-15	NA	30850481	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842993_30843081_30843299_30850320
ES.30585.34	chr7	-	6114	15	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-23	0	intron_retention	TRUE	canonical	0	0	junction_6	111.666869732783	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4676	False	NA	-1	True	AATAAA	-15	NA	30851517	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833757_30833838_30835165_30835247_30835985_30836064_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30842080_30842228_30842314_30843065_30843299_30851261
ES.30585.35	chr7	-	2628	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	2113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.7644890877731	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	7928	False	NA	-1	True	AATAAA	-15	NA	30848265	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30848158
ES.30585.36	chr7	-	5015	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-385	0	intron_retention	FALSE	canonical	0	0	junction_15	88.8825594534721	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	487	False	NA	-1	True	AATAAA	-15	NA	30855706	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291
ES.30585.37	chr7	-	2620	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	106.984460275707	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4722	False	NA	-1	True	AATAAA	-15	NA	30851471	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835132_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30851261
ES.30585.38	chr7	-	4633	18	NIC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-29	0	intron_retention	FALSE	canonical	3	45	junction_17	78.8513998137963	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	843	False	NA	-1	True	AATAAA	-15	NA	30855350	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842993_30843081_30843299_30854291_30854572_30855260
ES.30585.39	chr7	-	2685	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	106.737591760399	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4676	False	NA	-1	True	AATAAA	-15	NA	30851517	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835113_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30851261
ES.30585.4	chr7	-	2872	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-163	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.1130101324254	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTACCTGTGGGGT	5523	False	NA	0	True	AATAAA	-16	NA	30850670	30829550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.40	chr7	-	3014	20	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-496	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.38443428633	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	376	False	NA	-1	True	AATAAA	-15	NA	30855817	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260_30855423_30855766
ES.30585.42	chr7	-	5255	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-73	0	intron_retention	FALSE	canonical	0	0	junction_6	112.9737698068	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	799	False	NA	-1	True	AATAAA	-15	NA	30855394	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834873_30835165_30835247_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260
ES.30585.43	chr7	-	2855	19	NNC	ENSMUSG00000001248.16	novel	3810	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.503968181404	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4686	False	NA	-1	True	AATAAA	-15	NA	30851507	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30845174_30845263_30851261
ES.30585.44	chr7	-	2616	19	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	118.198984767214	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5757	False	NA	-1	True	AATAAA	-15	NA	30850436	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30830857_30830929_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835113_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.46	chr7	-	2617	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.443818507798	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5749	False	NA	-1	True	AATAAA	-15	NA	30850444	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835049_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.47	chr7	-	3776	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_10	97.1319777094547	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5708	False	NA	-1	True	AATAAA	-15	NA	30850485	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839170_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.48	chr7	-	3109	19	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	-358	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.574049036358	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	514	False	NA	-1	True	AATAAA	-15	NA	30855679	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835132_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260
ES.30585.49	chr7	-	4848	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-108	0	intron_retention	FALSE	canonical	0	0	junction_6	111.933247532242	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	764	False	NA	-1	True	AATAAA	-15	NA	30855429	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835087_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855260
ES.30585.5	chr7	-	5689	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_14	77.9468764964675	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5740	False	NA	-1	True	AATAAA	-15	NA	30850453	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.51	chr7	-	3991	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	112.422455914065	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5734	False	NA	-1	True	AATAAA	-15	NA	30850459	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30834907_30836095_30836710_30837523_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.52	chr7	-	4037	18	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-364	0	intron_retention	FALSE	canonical	0	0	junction_15	103.641917479481	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	508	False	NA	-1	True	AATAAA	-15	NA	30855685	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855528
ES.30585.53	chr7	-	4594	17	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_15	78.2601580866663	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5756	False	NA	-1	True	AATAAA	-15	NA	30850437	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.54	chr7	-	3795	18	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_16	110.418956799823	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5749	False	NA	-1	True	AATAAA	-15	NA	30850444	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30830857_30830929_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.55	chr7	-	3070	15	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.5683541234721	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5743	False	NA	-1	True	AATAAA	-15	NA	30850450	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832259_30834204_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.56	chr7	-	3806	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_14	77.2074838053641	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	5749	False	NA	-2	True	AATAAA	-14	NA	30850444	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.57	chr7	-	2984	19	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-391	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	101.783114852788	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	481	False	NA	-2	True	AATAAA	-14	NA	30855712	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30854291_30854572_30855528
ES.30585.58	chr7	-	3511	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-46	-1	intron_retention	FALSE	canonical	0	0	junction_15	99.0392963536304	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	NA	False	NA	-2	True	AATAAA	-14	NA	30843183	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832318_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065
ES.30585.59	chr7	-	2636	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.2915032321103	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	5784	False	NA	-2	True	AATAAA	-14	NA	30850409	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832318_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.6	chr7	-	2659	18	NNC	ENSMUSG00000001248.16	novel	2735	19	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_15	92.6270940206633	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5765	False	NA	-1	True	AATAAA	-15	NA	30850428	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835113_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842937_30842993_30843081_30843299_30850320
ES.30585.60	chr7	-	3951	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	1370	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	96.0619033402753	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	2242	False	NA	-2	True	AATAAA	-14	NA	30853951	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843744_30852965
ES.30585.61	chr7	-	3931	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_14	77.1256982680438	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTTGTACCTGTGGG	5750	False	NA	-2	True	AATAAA	-14	NA	30850443	30829552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.62	chr7	-	2850	19	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	118.766811675466	399	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	5615	False	NA	-3	True	AATAAA	-13	NA	30850578	30829553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833164_30833242_30833415_30833504_30833582_30833753_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.63	chr7	-	3296	18	NIC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	3	-2	intron_retention	FALSE	canonical	3	173	junction_6	41.8492102838761	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	5759	False	NA	-3	True	AATAAA	-13	NA	30850434	30829553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842993_30843081_30843299_30850320
ES.30585.65	chr7	-	4055	15	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-301	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	103.677187383115	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	5385	False	NA	-3	True	AATAAA	-13	NA	30850808	30829553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.66	chr7	-	1679	11	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	337	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	89.5318937585931	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	NA	False	NA	-3	True	AATAAA	-13	NA	30838959	30829553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833932_30835125_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821
ES.30585.67	chr7	-	5432	5	NIC	ENSMUSG00000001248.16	novel	764	8	NA	NA	-1632	-2	intron_retention	FALSE	canonical	3	258	junction_3	33.2302572966265	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGCTTGTACCTGTGG	1286	False	NA	-3	True	AATAAA	-13	NA	30835325	30829553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_30832087_30832182_30833504_30833582_30833757_30833838_30835165_30835247
ES.30585.7	chr7	-	5778	16	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_14	96.5883820940984	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	4712	False	NA	-1	True	AATAAA	-15	NA	30851481	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842328_30843077_30843299_30851261
ES.30585.8	chr7	-	2689	18	NNC	ENSMUSG00000001248.16	novel	2713	19	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	93.6617635513932	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5613	False	NA	-1	True	AATAAA	-15	NA	30850580	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835113_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30843065_30843299_30850320
ES.30585.9	chr7	-	3783	17	NNC	ENSMUSG00000001248.16	novel	3722	18	NA	NA	-75	0	intron_retention	FALSE	canonical	0	0	junction_15	97.3224143954002	399	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5611	False	NA	-1	True	AATAAA	-15	NA	30850582	30829551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842001_30842228_30842314_30843065_30843299_30850320
ES.30586.1	chr7	-	153	1	Intergenic	novelGene_25206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	30889170	30889017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_30889000_30889200
ES.30587.1	chr7	-	1486	2	Intergenic	novelGene_25207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	31226230	31216188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_31217448_31226003
ES.30588.1	chr7	-	1153	2	Intergenic	novelGene_25208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACCTGACTAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	32257775	32256279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_32257405_32257747
ES.30589.1	chr7	+	191	1	Intergenic	novelGene_25209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	33812234	33812425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_33812200_33812400
ES.3059.1	chr10	+	3718	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	40	-2	40	2	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTTTCGTCAATAGT	NA	False	NA	24	True	AATAAA	-32	NA	70080969	70121800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.10	chr10	+	3594	6	NNC	ENSMUSG00000037762.7	novel	1469	4	NA	NA	10673	0	intron_retention	FALSE	canonical	2	4	junction_1	33.2168631872427	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTTCGTCAATA	NA	False	NA	22	True	AATAAA	-30	NA	70091602	70121798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_70091720_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.11	chr10	+	3836	5	ISM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	10693	-192	10693	192	3prime_fragment	FALSE	canonical	3	72	junction_4	10.3531396204243	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTATTGTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	70091622	70121990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.2	chr10	+	1760	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	111	1885	111	3	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACTTTATACCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	70081040	70119913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.3	chr10	+	2793	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	132	831	132	-831	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTCAAGTTTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	70081061	70120967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.4	chr10	+	3782	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	168	-194	168	194	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTATTGTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	70081097	70121992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ES.3059.5	chr10	+	4252	5	ISM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	172	8	172	-8	intron_retention	FALSE	canonical	3	72	junction_1	10.3531396204243	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCCAAGTCTTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	70081101	70121790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118
ES.3059.7	chr10	+	3449	5	NIC	ENSMUSG00000037762.7	novel	3756	6	NA	NA	207	-4	intron_retention	FALSE	canonical	1	8	junction_3	30.9546038579078	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAAGTCTTGTTTTCGTC	NA	False	NA	18	True	AATAAA	-26	NA	70081136	70121794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_70081209_70091789_70092023_70102921_70103066_70118118_70119028_70119703
ES.3059.9	chr10	+	3244	7	NNC	ENSMUSG00000037762.7	novel	1469	4	NA	NA	351	2	intron_retention	FALSE	canonical	1	1	junction_1	39.9141439703884	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTTTCGTCAATAGT	NA	False	NA	24	True	AATAAA	-32	NA	70081280	70121800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_70081541_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703_70120865_70121359
ES.30590.1	chr7	-	2309	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	36	-383	36	383	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	33832657	33808584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.10	chr7	-	1406	8	NNC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	103	-630	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.635226440453	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	33832590	33810280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33810525_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.11	chr7	-	1319	1	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	1835	-5681	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGCAGATGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	33816650	33815331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33815300_33816600
ES.30590.2	chr7	-	2015	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	-52	-1	-52	1	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGTGGTTATTTCTCA	NA	False	NA	-1	True	AATATA	-21	NA	33832745	33808966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.3	chr7	-	1968	8	NNC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.578423409117	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGTGGTTATTTCTCA	NA	False	NA	-1	True	AATATA	-21	NA	33832658	33808966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33809665_33816018_33816128_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.4	chr7	-	1871	7	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	115.481119187895	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGTGGTTATTTCTCA	NA	False	NA	-1	True	AATATA	-21	NA	33832703	33808966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33831913
ES.30590.5	chr7	-	2109	7	FSM	ENSMUSG00000036459.16	ENSMUST00000140911.4	968	7	-460	-681	-10	-2	multi-exon	FALSE	canonical	3	259	junction_4	28.1286725997197	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCATGGTGGTTATTTC	NA	False	NA	-4	True	AATATA	-18	NA	33832703	33808969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818632_33824909_33825012_33831913
ES.30590.6	chr7	-	1992	8	NNC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	-47	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	106.401434699549	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGGACCATGGTGGT	NA	False	NA	-10	True	AATATA	-12	NA	33832740	33808975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818222_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.7	chr7	-	1888	9	NNC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.427236849872	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGGACCATGGTGG	NA	False	NA	-11	True	AATATA	-11	NA	33832702	33808976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33809303_33809376_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ES.30590.8	chr7	-	2276	6	NIC	ENSMUSG00000036459.16	novel	968	7	NA	NA	-53	-9	intron_retention	FALSE	canonical	3	276	junction_4	23.0824608740056	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGGACCATGGTGG	NA	False	NA	-11	True	AATATA	-11	NA	33832746	33808976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818632_33824909_33825012_33831913
ES.30590.9	chr7	-	1887	7	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	114.870579349109	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTTGGACCATGGTG	NA	False	NA	-12	True	AATATA	-10	NA	33832691	33808977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818563_33818632_33824909_33825012_33831913
ES.30591.1	chr7	+	2715	1	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATATTTCAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	33851174	33853889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_33851200_33853900
ES.30591.2	chr7	+	1501	2	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATATTTCAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	33851176	33853889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_33851202_33852413
ES.30592.1	chr7	+	179	1	Intergenic	novelGene_25211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33859260	33859439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_33859300_33859400
ES.30593.1	chr7	+	217	1	Antisense	novelGene_ENSMUSG00000052997.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCATAGCAAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	33863550	33863767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_33863600_33863800
ES.30594.1	chr7	-	2757	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	-173	-5	-173	5	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGGGTTTGTGTC	NA	False	NA	5	True	AATAAA	-32	NA	33868173	33840107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.11	chr7	-	3463	16	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	1993	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	398.461820281721	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	NA	False	NA	-6	True	AATAAA	-21	NA	33866007	33840118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845723_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826
ES.30594.12	chr7	-	5731	2	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	-1359	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTGTTGCCCTAGT	7770	False	NA	-6	True	AATAAA	-21	NA	33847067	33840118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33845727_33846944
ES.30594.15	chr7	-	4114	16	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	67	-7	intron_retention	FALSE	canonical	0	0	junction_3	398.761215098292	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTCTGTTGCCCTAG	NA	False	NA	-7	True	AATAAA	-20	NA	33867933	33840119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.17	chr7	-	1419	7	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	2810	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	744.48028106115	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTCTGTTGCCCTAG	865	False	NA	-7	True	AATAAA	-20	NA	33853972	33840119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840894_33842178_33842300_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908
ES.30594.19	chr7	-	4062	13	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	572.307148498271	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867995	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858517_33866132
ES.30594.20	chr7	-	3823	16	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	24	-8	intron_retention	FALSE	canonical	1	29	junction_11	388.198608961959	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867976	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860903_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.21	chr7	-	3744	15	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	30	-8	intron_retention	FALSE	canonical	0	0	junction_3	549.600137576848	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867970	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.22	chr7	-	2468	16	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	32	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	530.923329890694	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867968	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33864826_33864911_33867797
ES.30594.23	chr7	-	5274	16	ISM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	184	8	184	-8	intron_retention	FALSE	canonical	0	0	junction_4	398.461820281721	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	NA	False	NA	-8	True	AATAAA	-19	NA	33867816	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826
ES.30594.26	chr7	-	3938	4	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	-2792	-8	intron_retention	FALSE	canonical	0	0	junction_3	693.653291557741	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCCTCTGTTGCCCTA	6337	False	NA	-8	True	AATAAA	-19	NA	33848500	33840120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33842300_33843914_33844021_33845629_33845727_33846944
ES.30594.27	chr7	-	2541	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	47	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	519.193951597089	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867953	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867779
ES.30594.28	chr7	-	1744	9	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	16	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	651.147916663334	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867984	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33864826_33864911_33867797
ES.30594.29	chr7	-	2604	18	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	16	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	585.006840524286	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867984	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33841227_33841278_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.3	chr7	-	2508	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	501.764943567952	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGCCCTAGTGGGTT	NA	False	NA	-1	True	AATAAA	-26	NA	33867948	33840113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860979_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.30	chr7	-	2532	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	41	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	386.788858543974	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867959	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845723_33846937_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.31	chr7	-	5906	16	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	55	-9	intron_retention	FALSE	canonical	0	0	junction_4	531.566297736123	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867945	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33854070_33855309_33855410_33856667_33856790_33857403_33857468_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.32	chr7	-	1944	12	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	-1057	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	604.871258756292	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33864900	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33862578_33862644_33863809_33863881_33864826
ES.30594.33	chr7	-	2659	17	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	31	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	514.202655665789	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33868993	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33868701
ES.30594.34	chr7	-	5420	15	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	36	-9	intron_retention	FALSE	canonical	0	0	junction_2	408.946412586474	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867964	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.35	chr7	-	6550	16	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	21	-9	intron_retention	TRUE	non_canonical	0	0	junction_3	529.933681385385	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867979	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33859253_33859463_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.36	chr7	-	4834	13	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	42	-9	intron_retention	FALSE	canonical	0	0	junction_3	578.059319091812	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGCCTCTGTTGCCCT	NA	False	NA	-9	True	AATAAA	-18	NA	33867958	33840121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33856790_33857403_33857472_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.38	chr7	-	2707	18	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	57	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	595.941370981289	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGCCTCTGTTGCCC	NA	False	NA	-10	True	AATAAA	-17	NA	33867943	33840122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33865979_33866175_33867797
ES.30594.39	chr7	-	2549	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	13	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	521.993111634387	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTGCCTCTGTTGCC	NA	False	NA	-11	True	AATAAA	-16	NA	33867987	33840123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856673_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.4	chr7	-	3176	16	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_4	399.473598070706	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGCCCTAGTGGGT	NA	False	NA	-2	True	AATAAA	-25	NA	33867985	33840114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.40	chr7	-	2561	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	24	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	515.047202782182	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATCTGCCTCTGTTGC	NA	False	NA	-12	True	AATAAA	-15	NA	33867976	33840124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842318_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.42	chr7	-	2485	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	546	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	519.842388974774	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCATCTGCCTCTGTT	NA	False	NA	-14	True	AATAAA	-13	NA	33867454	33840126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867331
ES.30594.44	chr7	-	3022	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	69	12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	516.287090071987	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCATCTGCCTCTGTT	NA	False	NA	-14	True	AATAAA	-13	NA	33867931	33840126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858517_33860587_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.46	chr7	-	2257	14	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	13	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	562.514662530791	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGTCATCTGCCTC	NA	False	NA	-18	True	AATAAA	-9	NA	33867987	33840130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.47	chr7	-	2550	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	54	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	511.600945409359	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATGATGTCTGCATA	NA	False	NA	-33	True	AATATA	-16	NA	33867946	33840145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860903_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.48	chr7	-	2550	17	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	-1783	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	519.842388974774	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATGATGTCTGCATA	NA	False	NA	-33	True	AATATA	-16	NA	33865626	33840145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33865419
ES.30594.49	chr7	-	3942	1	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	-4034	-3947	mono-exon	FALSE	NA	NA	NA	NA	NA	757	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCAGTATAGGTTTTT	5095	False	NA	NA	False	AAGAAA	-5	NA	33849742	33845800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33845800_33849700
ES.30594.50	chr7	-	2532	13	ISM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	36	5724	36	-3983	5prime_fragment	FALSE	canonical	3	1349	junction_2	99.8209508180633	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33867964	33845836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.51	chr7	-	225	1	Intergenic	novelGene_25210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	745	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGGCTGGAAAGGTGG	NA	False	NA	NA	False	TTTAAA	-8	NA	33854989	33854764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_33854800_33855000
ES.30594.52	chr7	-	2770	6	NNC	ENSMUSG00000052997.16	novel	608	5	NA	NA	13	2506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	637.126235529506	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33867987	33858491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33859253_33859463_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30594.6	chr7	-	3811	16	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	36	-3	intron_retention	FALSE	canonical	0	0	junction_3	396.59364033675	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTTGCCCTAGTGGG	NA	False	NA	-3	True	AATAAA	-24	NA	33867964	33840115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ES.30595.1	chr7	+	174	1	Intergenic	novelGene_25212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33882170	33882344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_33882200_33882300
ES.30596.1	chr7	-	178	1	Intergenic	novelGene_25213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33882540	33882362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_33882400_33882500
ES.30597.1	chr7	-	1280	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	14	1	14	-1	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTGGTTTATTGTTC	5746	False	NA	-7	True	TATAAA	-14	NA	33896072	33883924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.11	chr7	-	1364	8	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	348.818706201256	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5729	False	NA	NA	False	ATTAAA	-17	NA	33896089	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33885868_33886215_33886419_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.12	chr7	-	1710	7	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	287.318880146935	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5731	False	NA	NA	False	ATTAAA	-17	NA	33896087	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33886419_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.14	chr7	-	1130	7	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	281.779267433847	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5724	False	NA	NA	False	ATTAAA	-17	NA	33896094	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895828_33895960
ES.30597.15	chr7	-	2630	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	8	-5	intron_retention	FALSE	canonical	3	638	junction_1	64.5371211009602	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATATATATGTGTTTAC	5740	False	NA	NA	False	ATTAAA	-15	NA	33896078	33884062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.16	chr7	-	1088	7	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_6	249.733190959205	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATATATATGTGTTTAC	5725	False	NA	NA	False	ATTAAA	-15	NA	33896093	33884062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895789_33895960
ES.30597.17	chr7	-	4989	5	ISM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-54	561	-1	-561	5prime_fragment	FALSE	canonical	3	753	junction_1	24.5089269450949	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCCCCCCCCCCCA	5731	False	NA	NA	False	NA	NA	NA	33896087	33884618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.18	chr7	-	4813	4	NIC	ENSMUSG00000002635.12	novel	959	6	NA	NA	8	-561	intron_retention	FALSE	canonical	3	69	junction_3	329.739290955749	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCCCCCCCCCCCA	5740	False	NA	NA	False	NA	NA	NA	33896078	33884618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33888882_33892160_33892532_33895490_33895552_33895960
ES.30597.19	chr7	-	3991	6	NNC	ENSMUSG00000002635.12	novel	388	2	NA	NA	14	-592	intron_retention	FALSE	non_canonical	0	0	junction_1	316.659691151242	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAGAAAAAAAAAAA	5746	False	NA	NA	False	NA	NA	NA	33896072	33884649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884711_33885662_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.2	chr7	-	1309	8	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	347.464225144261	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTGGTTTATTGTTC	5780	False	NA	-7	True	TATAAA	-14	NA	33896038	33883924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33885868_33886355_33886419_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.20	chr7	-	4283	5	ISM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-49	1262	4	-1262	5prime_fragment	FALSE	canonical	3	753	junction_1	24.5089269450949	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTGCTAATTATTAA	5736	False	NA	NA	False	NA	NA	NA	33896082	33885319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.21	chr7	-	1319	6	ISM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	18	1440	18	-1306	5prime_fragment	FALSE	canonical	3	638	junction_1	64.5371211009602	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAATTAAAAAAA	5750	False	NA	NA	False	NA	NA	NA	33896068	33885363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.22	chr7	-	975	5	ISM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-45	4566	8	-84	5prime_fragment	FALSE	canonical	3	753	junction_1	24.5089269450949	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGGTGTGTGTTTGTG	5740	False	NA	NA	False	TTTAAA	-16	NA	33896078	33888623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.3	chr7	-	1214	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	-49	130	-49	4	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTACCTTATTTTA	5683	False	NA	NA	False	ATTAAA	-24	NA	33896135	33884053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.4	chr7	-	4076	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-8	1	intron_retention	FALSE	canonical	3	713	junction_1	37.7232024091275	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTTTACCTTATT	5724	False	NA	NA	False	ATTAAA	-21	NA	33896094	33884056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33884237_33885718_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.5	chr7	-	5557	5	NIC	ENSMUSG00000002635.12	novel	959	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	753	junction_1	24.5089269450949	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5724	False	NA	NA	False	ATTAAA	-20	NA	33896094	33884057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.7	chr7	-	1222	8	NNC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	347.464225144261	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5731	False	NA	NA	False	ATTAAA	-17	NA	33896087	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33884237_33885718_33885868_33886355_33886419_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.8	chr7	-	3173	6	NNC	ENSMUSG00000002635.12	novel	959	6	NA	NA	18	-3	intron_retention	FALSE	canonical	3	9	junction_1	313.068427025147	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5750	False	NA	NA	False	ATTAAA	-17	NA	33896068	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33886419_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30597.9	chr7	-	1017	6	FSM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	-61	3	-8	-3	multi-exon	TRUE	canonical	3	50	junction_1	296.710903068964	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATATGTGTTTACCT	5724	False	NA	NA	False	ATTAAA	-17	NA	33896094	33884060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33884237_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ES.30598.1	chr7	-	2970	18	FSM	ENSMUSG00000086526.3_ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	-269	183	-269	-183	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCAGGGATGAACTCGA	NA	False	NA	NA	False	NA	NA	NA	33930030	33900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.12	chr7	-	2040	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-6	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	478.136144848285	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTACTTTTATCTGT	NA	False	NA	-13	True	AATAAA	-44	NA	33929720	33901555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907178_33907277_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.15	chr7	-	1999	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	473.295360499019	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCAGTACTTTTATC	NA	False	NA	-16	True	AATAAA	-41	NA	33929688	33901558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33905000_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.17	chr7	-	1999	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	2	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	632.220878138586	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGTCAGTACTTTTAT	NA	False	NA	-17	True	AATAAA	-40	NA	33929712	33901559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903564_33904992_33905070_33905242_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.19	chr7	-	3163	17	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	20	intron_retention	FALSE	canonical	3	1600	junction_14	171.253911907874	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACTGAGTCAGTACTT	NA	False	NA	-21	True	AATAAA	-36	NA	33929711	33901563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33901975_33902061_33902129_33902239_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.2	chr7	-	4878	9	FSM	ENSMUSG00000036427.6	ENSMUST00000135243.3	3195	9	-1037	-646	-1037	-183	multi-exon	FALSE	canonical	3	1605	junction_5	199.218433823279	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCAGGGATGAACTCGA	NA	False	NA	NA	False	NA	NA	NA	33910839	33900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674
ES.30598.20	chr7	-	2023	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-8	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	473.295360499019	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACTGAGTCAGTACTT	NA	False	NA	-21	True	AATAAA	-36	NA	33929722	33901563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903570_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.21	chr7	-	2108	19	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-23	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	617.443847099465	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCAGTTTACTGAGTCA	NA	False	NA	-27	True	AATAAA	-30	NA	33929737	33901569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33911934_33911998_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.23	chr7	-	5571	9	NNC	ENSMUSG00000036427.6	novel	3195	9	NA	NA	980	7	intron_retention	FALSE	non_canonical	0	0	junction_8	678.438821394383	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCCTCTTCAGTTTAC	NA	False	NA	-34	True	AATAAA	-23	NA	33911881	33901576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33910316_33910374
ES.30598.24	chr7	-	8924	11	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-5644	2	intron_retention	FALSE	canonical	3	1605	junction_5	184.491734232187	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTCAGCCTCTTCAG	NA	False	NA	-39	True	AATAAA	-18	NA	33918505	33901581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33915435_33917722_33917768_33918455
ES.30598.25	chr7	-	6071	19	Fusion	ENSMUSG00000086526.3_ENSMUSG00000036427.6	novel	2884	18	NA	NA	14	2	intron_retention	FALSE	non_canonical	0	0	junction_9	617.595536669089	1085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTCAGCCTCTTCAG	NA	False	NA	-39	True	AATAAA	-18	NA	33933513	33901581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33909132_33909395_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.27	chr7	-	1184	11	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-4882	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	610.866302884682	1081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGCTCAGCCTCTTCA	NA	False	NA	-40	True	AATAAA	-17	NA	33917743	33901582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903473_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722
ES.30598.29	chr7	-	2000	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	476.549594030815	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGCTCAGCCTCTTCA	NA	False	NA	-40	True	AATAAA	-17	NA	33929711	33901582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928416_33928707_33928799_33929516
ES.30598.3	chr7	-	2613	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-10	-197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	635.34084250831	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAAAGAACCC	NA	False	NA	NA	False	NA	NA	NA	33929698	33900951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926657_33928352_33928422_33928707_33928799_33929521
ES.30598.30	chr7	-	4981	16	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	1600	junction_13	175.187848386303	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929711	33901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.31	chr7	-	2092	17	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	1600	junction_14	131.087220486972	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929711	33901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.32	chr7	-	1928	19	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	617.800758965039	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929710	33901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33928964_33929032_33929659
ES.30598.35	chr7	-	2079	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	476.126840417645	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929716	33901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915311_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.36	chr7	-	4679	5	NIC	ENSMUSG00000036427.6	novel	3195	9	NA	NA	-946	0	intron_retention	FALSE	canonical	3	1605	junction_3	265.779043568149	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33908269	33901583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33901975_33902061_33903583_33904992_33905070_33905230_33907326_33907674
ES.30598.37	chr7	-	2007	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	459.168460088979	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGGGCTCAGCCTCTT	NA	False	NA	-42	True	AATAAA	-15	NA	33929720	33901584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902067_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.39	chr7	-	1716	2	ISM	ENSMUSG00000036427.6	ENSMUST00000205983.2	617	8	26271	-529	2278	-1	3prime_fragment	FALSE	canonical	3	2071	junction_1	0	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGGGGCTCAGCCTCTT	NA	False	NA	-42	True	AATAAA	-15	NA	33903411	33901584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33902129_33902239
ES.30598.4	chr7	-	2651	19	Fusion	ENSMUSG00000086526.3_ENSMUSG00000036427.6	novel	2884	18	NA	NA	16	46	multi-exon	FALSE	canonical	1	2	junction_18	464.330009825653	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTGGGTGACCCTG	NA	False	NA	5	True	GGGGCT	-37	NA	33933511	33901537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516_33930112_33933311
ES.30598.41	chr7	-	1771	16	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	1	11	junction_12	505.208762130402	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGGGGGCTCAGCCTC	NA	False	NA	-44	True	AATAAA	-13	NA	33929711	33901586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.42	chr7	-	1963	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	478.177480044957	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGGGGGCTCAGCCTC	NA	False	NA	-44	True	AATAAA	-13	NA	33929693	33901586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918531_33920062_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.44	chr7	-	1250	13	ISM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	66	4475	-7	-1767	5prime_fragment	FALSE	canonical	3	1600	junction_10	98.7226755445104	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCCCGTCTGCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	33929695	33905229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.45	chr7	-	3232	1	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	1005	2360	mono-exon	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33927417	33924185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33924200_33927400
ES.30598.5	chr7	-	5201	11	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-346	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	800.43548147243	1080	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTATCTGTTACTTGT	NA	False	NA	-6	True	GGGGCT	-26	NA	33913207	33901548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33909110_33910316_33910374
ES.30598.6	chr7	-	9624	18	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	3	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	476.126840417645	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTATCTGTTACTT	NA	False	NA	-8	True	GGGGCT	-24	NA	33929711	33901550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33910316_33910374_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ES.30598.7	chr7	-	5876	18	Fusion	ENSMUSG00000086526.3_ENSMUSG00000036427.6	novel	2884	18	NA	NA	-22	31	intron_retention	FALSE	canonical	0	0	junction_17	476.310641272709	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTACTTTTATCTGTTAC	NA	False	NA	-10	True	GGGGCT	-22	NA	33933549	33901552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929514
ES.30598.8	chr7	-	1652	15	NNC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	-2	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	521.278809217079	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTACTTTTATCTGTT	NA	False	NA	-12	True	AATAAA	-45	NA	33929684	33901554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920104_33928707_33928799_33929516
ES.30599.1	chr7	+	4322	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	-130	-17	-130	17	multi-exon	FALSE	canonical	3	45	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCTTGCTTTACACTGA	NA	False	NA	NA	False	AAAAAG	-9	NA	33933671	33939649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_33933921_33935576
ES.30599.2	chr7	+	795	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	-101	3481	-101	1174	multi-exon	FALSE	canonical	3	45	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCCAAGTTATTTTA	NA	False	NA	NA	False	ATTAAA	-11	NA	33933700	33936151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_33933921_33935576
ES.30599.3	chr7	+	3305	1	FSM	ENSMUSG00000085105.3	ENSMUST00000205940.2	1112	1	-41	-2152	23	2152	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTAATGATTTAA	NA	False	NA	NA	False	AATAAA	-27	NA	33933824	33937129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_33933800_33937100
ES.30599.4	chr7	+	1802	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	23	2350	23	2305	multi-exon	FALSE	canonical	3	45	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATATATAGTGGGAAA	NA	False	NA	NA	False	TATAAA	-18	NA	33933824	33937282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_33933921_33935576
ES.30599.5	chr7	+	173	1	FSM	ENSMUSG00000085105.3	ENSMUST00000205940.2	1112	1	924	15	924	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	33934789	33934962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_33934800_33935000
ES.30599.6	chr7	+	4353	1	Genic_Genomic	ENSMUSG00000085105.3	novel	NA	NA	NA	NA	2997	1583	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCTGCTCCACTCGGG	NA	False	NA	NA	False	NA	NA	NA	33936862	33941215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_33936900_33941200
ES.306.1	chr1	-	628	3	Antisense	novelGene_ENSMUSG00000050122.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAATACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	37115032	37113732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_37114007_37114448_37114701_37114930
ES.3060.1	chr10	+	187	1	Intergenic	novelGene_2388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGCCAGAAGCAGGAC	5349	False	NA	NA	False	NA	NA	NA	70187435	70187622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_70187400_70187600
ES.30600.1	chr7	+	2097	1	Antisense	novelGene_ENSMUSG00000108737.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4558	False	NA	NA	False	NA	NA	NA	33947773	33949870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_33947800_33949900
ES.30601.1	chr7	-	6238	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	-7	-7	-7	7	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTTAAATTAATTGCA	9801	False	NA	NA	False	ATTAAA	-25	NA	34012983	33936124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.10	chr7	-	6272	15	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	50.9532098285941	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGTATCTTTTTTAAA	9848	False	NA	NA	False	ATTAAA	-16	NA	34012936	33936133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_33995984_33996075_34012911
ES.30601.12	chr7	-	6189	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	43.9588295820629	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGTATCTTTTTTAAA	9835	False	NA	NA	False	ATTAAA	-16	NA	34012949	33936133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940066_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.13	chr7	-	5045	14	FSM	ENSMUSG00000066571.14	ENSMUST00000206399.2	4158	14	-16	-871	7	-2	multi-exon	FALSE	canonical	0	0	junction_12	52.1350090783308	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGTATCTTTTTTAAA	9821	False	NA	NA	False	ATTAAA	-16	NA	34012963	33936133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_34011513_34011602_34012911
ES.30601.15	chr7	-	6699	12	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_7	46.7221433336052	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTGTATCTTTTTTAAA	9855	False	NA	NA	False	ATTAAA	-16	NA	34012929	33936133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.17	chr7	-	6246	15	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	49.0192069811541	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCTGTATCTTTTTTAA	9841	False	NA	NA	False	ATTAAA	-15	NA	34012943	33936134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34005209_34005268_34012911
ES.30601.19	chr7	-	4959	13	NIC	ENSMUSG00000066571.14	novel	5798	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	41.2501683498248	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9814	False	NA	NA	False	ATTAAA	-11	NA	34012970	33936138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_34012911
ES.30601.20	chr7	-	4115	7	NIC	ENSMUSG00000066571.14	novel	5798	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	55.6566857319646	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9804	False	NA	NA	False	ATTAAA	-11	NA	34012980	33936138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_34012911
ES.30601.23	chr7	-	6323	15	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	48.8458633596228	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9840	False	NA	NA	False	ATTAAA	-11	NA	34012944	33936138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34005209_34005348_34012911
ES.30601.24	chr7	-	5618	10	NIC	ENSMUSG00000066571.14	novel	5798	13	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	50.3405685258537	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	9844	False	NA	NA	False	ATTAAA	-11	NA	34012940	33936138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33962977_33963176_33984126_33985379_34012916
ES.30601.3	chr7	-	6310	15	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	48.9725558296664	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9810	False	NA	NA	False	ATTAAA	-18	NA	34012974	33936131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34011513_34011602_34012911
ES.30601.30	chr7	-	4446	13	NIC	ENSMUSG00000066571.14	novel	5798	13	NA	NA	-5	390	combination_of_known_splicesites	TRUE	canonical	2	4	junction_12	40.7372168088756	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTCCACAGTGCTG	9846	False	NA	NA	False	NA	NA	NA	34012938	33936614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_34012916
ES.30601.31	chr7	-	5727	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	13	484	7	389	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGTCCACAGTGCT	9821	False	NA	NA	False	NA	NA	NA	34012963	33936615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.33	chr7	-	5346	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	-4	882	-4	-9	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATACCAAAAAAAAAAA	9804	False	NA	NA	False	GATAAA	-10	NA	34012980	33937013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.35	chr7	-	5252	14	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-5	-47	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	43.348593883954	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTCTCATTTTTCT	9846	False	NA	NA	False	AATGAA	-15	NA	34012938	33937051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939239_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
ES.30601.37	chr7	-	5288	15	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-7	-110	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	49.1409883365595	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATAAATGGTTTATTCTT	9844	False	NA	NA	False	ATTAAA	-23	NA	34012940	33937114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34011513_34011602_34012916
ES.30601.39	chr7	-	5995	13	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	11	-115	intron_retention	FALSE	canonical	3	49	junction_12	30.0841412633892	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTAATAAATGGTTTA	9825	False	NA	NA	False	ATTAAA	-18	NA	34012959	33937119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.4	chr7	-	7394	12	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	60	junction_11	27.1360210119987	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9825	False	NA	NA	False	ATTAAA	-18	NA	34012959	33936131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
ES.30601.42	chr7	-	5038	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	1	-306	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	26.7307415605834	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGACATTTCCCACTATA	9810	False	NA	NA	False	AATAAA	-14	NA	34012974	33937310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
ES.30601.43	chr7	-	3961	12	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	8	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.0560205053953	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAAAGTATTTTTTTTA	9822	False	NA	NA	False	NA	NA	NA	34012962	33939576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33940072_33941664_33941831_33944390_33945404_33947527_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ES.30601.44	chr7	-	177	1	Intergenic	novelGene_25214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33949075	33948898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_33948900_33949100
ES.30601.45	chr7	-	3983	8	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	4	1882	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	30.0319557695955	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTTTTCTTTTGTTTTG	9818	False	NA	NA	False	GATAAA	-16	NA	34012966	33951584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
ES.30601.46	chr7	-	7686	1	Intergenic	novelGene_25215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGGAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34002751	33995065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_33995100_34002800
ES.30601.5	chr7	-	4671	13	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	-6524	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	41.7641359967563	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	33963168	33936131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945054_33945282_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977
ES.30601.8	chr7	-	6516	16	NNC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.0189052469052	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTATCTTTTTTAAAT	9810	False	NA	NA	False	ATTAAA	-17	NA	34012974	33936132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34010218_34010431_34011513_34011602_34012916
ES.30602.1	chr7	+	179	1	Intergenic	novelGene_25216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	34055959	34056138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34056000_34056100
ES.30603.1	chr7	+	7764	1	FSM	ENSMUSG00000082684.2	ENSMUST00000117881.2	416	1	-6134	-1214	-6134	1214	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACCACCCACCTAGCCC	NA	False	NA	NA	False	NA	NA	NA	34076949	34084713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_34076900_34084700
ES.30604.1	chr7	-	3458	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-5	-509	-5	509	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGAGTTCTTTCTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	34089117	34043561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.11	chr7	-	2941	11	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	204.713091911582	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTAACTATTTTGG	NA	False	NA	-13	True	AATAAA	-31	NA	34089117	34044072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053267_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.12	chr7	-	2862	11	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	294.48096712691	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTAACTATTTTGG	NA	False	NA	-13	True	AATAAA	-31	NA	34089159	34044072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34050710_34050943_34052814_34052984_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782_34089038_34089104
ES.30604.13	chr7	-	2881	11	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	204.713091911582	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTAACTATTTTGG	NA	False	NA	-13	True	AATAAA	-31	NA	34089048	34044072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053280_34056862_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.14	chr7	-	2954	11	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	203.038025995132	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCAAAGATTTCAATAT	NA	False	NA	-28	True	AATAAA	-16	NA	34089127	34044087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052802_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.15	chr7	-	2992	12	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	258.150542279769	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATCCAAAGATTTCAATA	NA	False	NA	-29	True	AATAAA	-15	NA	34089140	34044088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34066206_34066245_34070479_34070610_34074653_34074818_34088782
ES.30604.16	chr7	-	6178	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	51	-1	intron_retention	FALSE	canonical	3	572	junction_3	56.8710909659233	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATCCAAAGATTTCAATA	NA	False	NA	-29	True	AATAAA	-15	NA	34089061	34044088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.19	chr7	-	2719	12	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-1	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.745963443576	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATCTGGCCACTTTG	NA	False	NA	-8	True	AATAAA	-27	NA	34089113	34044135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34044514_34044561_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782_34088933_34088988
ES.30604.2	chr7	-	3288	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-15	506	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	198.945615746342	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCAGAGTTCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	34089127	34043564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.20	chr7	-	2872	12	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	60	-52	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	253.632192862417	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAAGATCTGGCCAC	NA	False	NA	-12	True	AATAAA	-23	NA	34089052	34044139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34070779_34070837_34074653_34074818_34088782
ES.30604.22	chr7	-	1727	4	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	4	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	314.909510812233	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAACTATAGTGAAAAA	NA	False	NA	-23	True	AATAAA	-12	NA	34089108	34044150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34074706_34074818_34088782
ES.30604.23	chr7	-	2705	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-26	265	-26	-248	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTATGCCTGGAATT	NA	False	NA	0	True	ATTAAA	-26	NA	34089138	34044335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.24	chr7	-	2641	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-20	-249	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGCTATGCCTGGAAT	NA	False	NA	-1	True	ATTAAA	-25	NA	34089132	34044336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.25	chr7	-	2470	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	31	-249	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	198.945615746342	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGCTATGCCTGGAAT	NA	False	NA	-1	True	ATTAAA	-25	NA	34089081	34044336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.28	chr7	-	2372	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-26	598	-26	471	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACGTGTCCTTGCAG	NA	False	NA	-4	True	AATAAA	-16	NA	34089138	34044668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.29	chr7	-	2297	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-8	471	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACGTGTCCTTGCAG	NA	False	NA	-4	True	AATAAA	-16	NA	34089120	34044668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.35	chr7	-	2336	11	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-16	468	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	204.651313213475	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAACATACGTGTCCTTG	NA	False	NA	-7	True	AATAAA	-13	NA	34088521	34044671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088198
ES.30604.36	chr7	-	186	1	Intergenic	novelGene_25217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTGATTGGGAGGCTC	NA	False	NA	NA	False	NA	NA	NA	34066780	34066594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34066600_34066800
ES.30604.37	chr7	-	1184	1	FSM	ENSMUSG00000066568.13	ENSMUST00000206715.2	2580	1	-495	1891	31	-1891	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAAGTCTTATAACAGT	NA	False	NA	NA	False	AATAAA	-18	NA	34089081	34087897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34087900_34089100
ES.30604.4	chr7	-	3252	10	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	65	499	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	262.429673118977	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACTCTTCTCAGAGT	NA	False	NA	NA	False	AATAAA	-9	NA	34089047	34043571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052984_34053089_34053273_34056858_34056922_34057190_34057368_34070479_34070610_34074653_34074818_34088782
ES.30604.5	chr7	-	3131	11	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	29	158	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	204.651313213475	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGGTTTCATTGTTGA	NA	False	NA	NA	False	AAGAAA	-9	NA	34088557	34043912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088198
ES.30604.6	chr7	-	3062	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	-44	-74	-44	74	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAGGAGAATTGGACTG	NA	False	NA	63	True	GATAAA	-16	NA	34089156	34043996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.7	chr7	-	2773	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	68	74	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	198.945615746342	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAGGAGAATTGGACTG	NA	False	NA	63	True	GATAAA	-16	NA	34089044	34043996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ES.30604.8	chr7	-	2923	12	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	-28	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	195.533218838696	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGGTTTTTGTTA	NA	False	NA	-4	True	AATAAA	-40	NA	34089140	34044063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782_34088927_34088982
ES.30605.1	chr7	+	1155	2	NNC	ENSMUSG00000085124.2	novel	1823	3	NA	NA	67946	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTGTATTTTAATTAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	34205507	34220309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_34205584_34219230
ES.30605.2	chr7	+	227	1	Intergenic	novelGene_25218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGGTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34217488	34217715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34217500_34217700
ES.30606.1	chr7	-	5108	5	Antisense	novelGene_ENSMUSG00000086631.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACAAGTATGGTGATT	NA	False	NA	NA	False	ATTAAA	-10	NA	34246178	34220274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_34221958_34234980_34235038_34238868_34238954_34240694_34243228_34245428
ES.30606.2	chr7	-	730	2	Antisense	novelGene_ENSMUSG00000086631.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATTTTATAATGTTT	NA	False	NA	NA	False	NA	NA	NA	34246224	34244947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_34245161_34245707
ES.30607.1	chr7	+	174	1	Intergenic	novelGene_25219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34310859	34311033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34310900_34311000
ES.30608.1	chr7	-	4153	5	Fusion	ENSMUSG00000108723.2_ENSMUSG00000030499.10	novel	2407	7	NA	NA	-2	-5	multi-exon	FALSE	canonical	0	0	junction_3	15.4434452114805	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAACTCCTCTGTGTTGTG	6797	False	NA	NA	False	AATAAA	-16	NA	34353825	34336425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_34339875_34341232_34341539_34344262_34344408_34352008_34352108_34353671
ES.30608.11	chr7	-	562	1	Antisense	novelGene_ENSMUSG00000085923.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTGACATGTGCCTTG	3808	False	NA	NA	False	AATAAA	-21	NA	34356814	34356252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_34356300_34356800
ES.30608.2	chr7	-	3978	6	FSM	ENSMUSG00000030499.10	ENSMUST00000108070.9	2409	6	-1569	0	-8	0	multi-exon	TRUE	canonical	3	27	junction_2	6.01996677731696	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGGCTCCGTCCTGTG	6791	False	NA	-12	True	TATAAA	-7	NA	34353831	34338439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008
ES.30608.3	chr7	-	2561	8	Fusion	ENSMUSG00000087127.2_ENSMUSG00000030499.10	novel	2480	7	NA	NA	5856	0	multi-exon	FALSE	canonical	0	0	junction_6	15.9232854778203	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	NA	False	NA	-16	True	TATAAA	-3	NA	34367568	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34364802_34364888_34367342
ES.30608.4	chr7	-	2458	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	-56	5	-56	0	multi-exon	FALSE	canonical	3	15	junction_6	8.78761755097605	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	6743	False	NA	-16	True	TATAAA	-3	NA	34353879	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
ES.30608.5	chr7	-	2309	7	NNC	ENSMUSG00000030499.10	novel	2480	7	NA	NA	-370	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	12.9282206389313	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	6429	False	NA	-16	True	TATAAA	-3	NA	34354193	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354134
ES.30608.7	chr7	-	6920	3	ISM	ENSMUSG00000030499.10	ENSMUST00000205419.2	743	4	-1276	-1163	-1276	0	intron_retention	FALSE	canonical	3	27	junction_2	7.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	8368	False	NA	-16	True	TATAAA	-3	NA	34349445	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_34339875_34341232_34341539_34344262
ES.30608.8	chr7	-	2404	7	NNC	ENSMUSG00000030499.10	novel	2480	7	NA	NA	476	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.6065752079239	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	6164	False	NA	-16	True	TATAAA	-3	NA	34354458	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354304
ES.30608.9	chr7	-	2430	7	NNC	ENSMUSG00000030499.10	novel	2480	7	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.6065752079239	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGAGGCTCCGTCC	5855	False	NA	-16	True	TATAAA	-3	NA	34354767	34338443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354587
ES.30609.1	chr7	+	154	1	Intergenic	novelGene_25220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATAGATAAATC	NA	False	NA	NA	False	NA	NA	NA	34377777	34377931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34377800_34377900
ES.3061.1	chr10	+	3436	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	-41	-15	-41	8	multi-exon	FALSE	canonical	3	12	junction_12	8.58332507759989	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACAGTAACTGTTTCC	9645	False	NA	NA	False	AATAAA	-29	NA	70276456	70394574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ES.3061.11	chr10	+	3350	14	FSM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	155	-195	109	195	multi-exon	FALSE	canonical	3	19	junction_7	7.58072922754149	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGATAAGCCATTATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	70276864	70394761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.3061.12	chr10	+	3055	12	ISM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	10144	5	10098	0	3prime_fragment	FALSE	canonical	3	19	junction_5	6.78841989185253	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	1345	False	NA	NA	False	AATAAA	-16	NA	70286853	70394561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.3061.2	chr10	+	4841	13	NNC	ENSMUSG00000043259.16	novel	4820	14	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_5	13.7769937052884	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAAGCACAGTAACTG	9684	False	NA	NA	False	AATAAA	-24	NA	70276495	70394569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334720_70334780_70370513_70370725_70372195_70372335_70378473_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ES.3061.4	chr10	+	3218	14	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	11.0314236475764	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAAGCACA	9700	False	NA	NA	False	AATAAA	-17	NA	70276511	70394562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.3061.6	chr10	+	2478	15	NIC	ENSMUSG00000043259.16	novel	3380	15	NA	NA	-6	-693	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	7.71329358699535	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGGTATTTTGGATAG	9892	False	NA	NA	False	ATTAAA	-11	NA	70276703	70393866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.3061.7	chr10	+	3090	13	NIC	ENSMUSG00000043259.16	novel	3262	14	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_2	11.231157059221	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9914	False	NA	NA	False	AATAAA	-16	NA	70276725	70394561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_70276906_70284587_70284645_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ES.3061.8	chr10	+	3289	14	FSM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	16	5	16	0	multi-exon	FALSE	canonical	3	19	junction_7	7.58072922754149	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9914	False	NA	NA	False	AATAAA	-16	NA	70276725	70394561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.3061.9	chr10	+	4882	13	NIC	ENSMUSG00000043259.16	novel	3310	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	19	junction_7	7.82446306287033	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATTATGTTGAAAGC	9921	False	NA	NA	False	AATAAA	-14	NA	70276732	70394559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ES.30610.1	chr7	+	170	1	Intergenic	novelGene_25221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGTAATAAATCTTAA	724	False	NA	NA	False	NA	NA	NA	34389361	34389531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34389400_34389500
ES.30611.1	chr7	+	262	2	Antisense	novelGene_ENSMUSG00000060402.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAATTATTTTTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	34443364	34446803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_34443485_34446661
ES.30612.1	chr7	+	886	5	Antisense	novelGene_ENSMUSG00000060402.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAACCGTCCCTCCCTC	NA	False	NA	NA	False	AATAGA	-14	NA	34498736	34510353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_34498769_34499441_34499685_34500212_34500314_34509205_34509469_34510106
ES.30613.1	chr7	-	2081	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	-1	292	-1	-1	multi-exon	TRUE	canonical	1	5	junction_3	4.02768199119819	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTCTACTCCAGGCT	NA	False	NA	0	True	AATAAA	-19	NA	34512112	34374184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
ES.30613.2	chr7	-	1955	4	NNC	ENSMUSG00000060402.9	novel	2699	4	NA	NA	3920	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.37704215656966	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTCTACTCCAGGC	NA	False	NA	-1	True	AATAAA	-18	NA	34449317	34374185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34375670_34376059_34376098_34447486_34447703_34449100
ES.30613.3	chr7	-	341	1	Intergenic	novelGene_25222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	34427493	34427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34427200_34427500
ES.30614.1	chr7	+	174	1	Intergenic	novelGene_25223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAGCAGGAAC	NA	False	NA	NA	False	NA	NA	NA	34534810	34534984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34534800_34535000
ES.30615.1	chr7	+	1911	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	-30	0	-30	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	34611773	34744133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ES.30615.10	chr7	+	1151	6	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	108584	2	-19519	-1	3prime_fragment	FALSE	canonical	3	314	junction_3	29.0544316757358	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTGCCCATCTTCC	NA	False	NA	12	True	AATAAA	-17	NA	34720387	34744131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ES.30615.100	chr7	+	4114	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	56.9655396036232	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285675	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.101	chr7	+	8293	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	7	intron_retention	FALSE	canonical	3	207	junction_16	26.2993216830331	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATTTTTGTGTTTTGTT	NA	False	NA	30	True	AGTAAA	-22	NA	35285675	35338658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.102	chr7	+	4053	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	71.8949417766036	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285675	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337886
ES.30615.103	chr7	+	4253	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	56.0272346310985	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285675	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300937_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.104	chr7	+	4230	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.9674178289793	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285675	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305334_35307716_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.105	chr7	+	4234	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	55.7689292472767	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285675	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319823_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.107	chr7	+	4165	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	54.9143990302223	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285675	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.108	chr7	+	4417	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.5125360072143	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285675	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300386_35300530_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.11	chr7	+	2498	1	Antisense	novelGene_ENSMUSG00000056216.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATAGAGTAATCT	482	False	NA	NA	False	AATAAA	-9	NA	34744430	34746928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_34744400_34746900
ES.30615.110	chr7	+	5238	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	6	junction_28	55.0540087327982	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285677	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
ES.30615.111	chr7	+	2295	11	NIC	ENSMUSG00000034867.17	novel	1926	12	NA	NA	7	492	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	83.1182892027982	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTAAGATTGTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	35285686	35309031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ES.30615.112	chr7	+	4104	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	56.978108086329	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285688	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.113	chr7	+	4325	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	71.6177261020852	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285689	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35314705_35314770_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.114	chr7	+	1886	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	15	25	-10	-25	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAAAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	35285689	35308514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ES.30615.115	chr7	+	4280	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	55.9438835999513	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285689	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330549_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.116	chr7	+	4051	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	70.778506192032	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285689	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
ES.30615.117	chr7	+	4289	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.3994193405067	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCGATTGTGTCGTG	NA	False	NA	12	True	AGTAAA	-4	NA	35285689	35338640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302942_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.119	chr7	+	4121	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-10	-1	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_20	70.7456464545424	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285689	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320046_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
ES.30615.12	chr7	+	3456	1	Antisense	novelGene_ENSMUSG00000056216.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGACCACTTCTTCCT	1603	False	NA	NA	False	NA	NA	NA	34745551	34749007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_34745600_34749000
ES.30615.120	chr7	+	5323	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-8	-2	intron_retention	FALSE	canonical	0	0	junction_4	71.3978593585806	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285691	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35301072_35301852_35302012_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337442
ES.30615.121	chr7	+	4224	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	54.9085975201758	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATTTTTGTGTTTTGTT	NA	False	NA	30	True	AGTAAA	-22	NA	35285693	35338658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320046_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.122	chr7	+	4168	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	73.4455557339208	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285700	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321733_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335954_35336028_35337438
ES.30615.125	chr7	+	4216	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	55.7689292472767	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285705	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318909_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.126	chr7	+	10150	27	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	7	-2	intron_retention	FALSE	canonical	3	207	junction_15	26.3993006900387	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285708	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.127	chr7	+	2391	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	34	-499	7	499	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGTGTGTGTGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	35285708	35309038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ES.30615.129	chr7	+	3327	21	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-4031	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	64.2904347473246	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCAAGTGGGCCCTGTC	NA	False	NA	NA	False	GATAAA	-19	NA	35285709	35322938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314533_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729
ES.30615.13	chr7	+	2634	1	FSM	ENSMUSG00000034957.11	ENSMUST00000042985.11	2626	1	-10	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGTGTCTTTTTAAA	NA	False	NA	NA	False	TATAAA	-13	NA	34818717	34821351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_34818700_34821400
ES.30615.130	chr7	+	4941	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	55.23581173441	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285709	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302708_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.131	chr7	+	2809	25	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	1282	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	58.9392195165683	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACATAGAAATATAAT	NA	False	NA	NA	False	NA	NA	NA	35285709	35329156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35328951
ES.30615.132	chr7	+	4334	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	72.1485618856266	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285709	35338651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35303987_35304079_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.133	chr7	+	4414	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.0481903730311	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285709	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311122_35311295_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.134	chr7	+	4362	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.3621501944868	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285709	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302587_35302708_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.135	chr7	+	4381	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	8	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	83.0714632967828	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285709	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285812_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302012_35302587_35302708_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.137	chr7	+	3970	27	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	56.5849102765562	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285711	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.14	chr7	+	2664	3	Antisense	novelGene_ENSMUSG00000118454.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGAGTTGCATTTGTG	NA	False	NA	NA	False	NA	NA	NA	34934390	34939340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_34934721_34934800_34936167_34938372
ES.30615.140	chr7	+	2016	1	Intergenic	novelGene_25236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAGAAAATGTAATAAC	NA	False	NA	NA	False	NA	NA	NA	35287904	35289920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_35287900_35289900
ES.30615.141	chr7	+	4206	28	NNC	ENSMUSG00000034867.17	novel	693	7	NA	NA	-3895	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6413923306307	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35296955	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35297137_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.142	chr7	+	6652	27	ISM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	11444	2	-3738	-2	3prime_fragment	FALSE	canonical	3	207	junction_15	24.1087587511408	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35297112	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.147	chr7	+	4277	20	NNC	ENSMUSG00000034867.17	novel	693	7	NA	NA	-1095	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.733805624825	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35310479	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35310669_35310775_35311981_35313879_35314008_35314452_35314536_35314705_35314770_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
ES.30615.15	chr7	+	241	1	Intergenic	novelGene_25227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTAGGCCCAGGCCA	NA	False	NA	NA	False	NA	NA	NA	34937596	34937837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34937600_34937800
ES.30615.150	chr7	+	2122	9	ISM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	36059	2	2824	-2	3prime_fragment	FALSE	canonical	3	247	junction_1	18.4725302814747	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35321727	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.151	chr7	+	4321	8	ISM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	37162	-3	3927	3	3prime_fragment	FALSE	canonical	3	251	junction_4	17.7096768197848	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGCCATTTTTGTGTTT	NA	False	NA	26	True	AGTAAA	-18	NA	35322830	35338654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.16	chr7	+	180	1	Intergenic	novelGene_25229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTATATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	34968385	34968565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_34968400_34968600
ES.30615.17	chr7	+	3540	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	-34	2	-34	-2	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	35033560	35091712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.18	chr7	+	3214	16	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	-33	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	29.2524642836577	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTAATTTTTCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	35033561	35091702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090715_35091029
ES.30615.19	chr7	+	4092	14	NNC	ENSMUSG00000030494.14	novel	3508	15	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_3	31.3446200662983	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTAATTTTTCTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	35033595	35091703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35060404_35060538_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35084210_35084751_35084908_35090179
ES.30615.21	chr7	+	3141	16	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	25.1496852200314	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTCTTTTGCT	NA	False	NA	24	True	AATAAA	-24	NA	35033661	35091712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090727_35091024
ES.30615.24	chr7	+	3489	16	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	-37	-4	intron_retention	FALSE	canonical	0	0	junction_3	38.2814141152945	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAATTTTTCTTTTTTCT	NA	False	NA	18	True	AATAAA	-18	NA	35033717	35091706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35054753_35054866_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.25	chr7	+	3081	16	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.2524642836577	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35033723	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090736_35091029
ES.30615.26	chr7	+	3352	15	NNC	ENSMUSG00000030494.14	novel	3046	16	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_9	29.8851543241723	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35033740	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076550_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.28	chr7	+	3381	15	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19184	0	intron_retention	FALSE	canonical	3	27	junction_1	23.30422139214	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35052938	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.29	chr7	+	2506	11	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19201	1196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	47.5122089572775	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	35052955	35082243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35076398_35076556_35078989_35079110_35080761_35081273_35081318
ES.30615.3	chr7	+	4681	14	NIC	ENSMUSG00000063931.15	novel	1881	15	NA	NA	30	-3	intron_retention	FALSE	canonical	3	282	junction_1	32.5776269109327	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTTCTGCCCATCTT	NA	False	NA	10	True	AATAAA	-15	NA	34611833	34744129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34743307_34743655
ES.30615.30	chr7	+	3472	16	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19203	-2	intron_retention	FALSE	canonical	0	0	junction_3	41.7460044661629	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTTCTTTTTTCTTT	NA	False	NA	20	True	AATAAA	-20	NA	35052957	35091708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35054753_35054866_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.31	chr7	+	3220	14	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19203	1	intron_retention	FALSE	canonical	1	1	junction_12	36.2695366656486	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTCTTTTGCTTTT	NA	False	NA	27	True	AATAAA	-27	NA	35052957	35091715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084751_35084908_35090179
ES.30615.32	chr7	+	8553	15	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19216	-1	intron_retention	TRUE	canonical	0	0	junction_14	34.8088805230117	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTTTTTTCTTTT	NA	False	NA	21	True	AATAAA	-21	NA	35052970	35091709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35089327_35089393
ES.30615.33	chr7	+	3047	16	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19219	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	34.4705993887867	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTAATTTTTCTTTTTTC	NA	False	NA	17	True	AATAAA	-17	NA	35052973	35091705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090736_35091029
ES.30615.34	chr7	+	3029	16	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19220	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.4705993887867	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTTTTTTCTTTT	NA	False	NA	21	True	AATAAA	-21	NA	35052974	35091709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090715_35091029
ES.30615.38	chr7	+	3587	14	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	-21950	0	intron_retention	FALSE	non_canonical	0	0	junction_1	30.8594830207457	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	1	True	NA	22	True	AATAAA	-22	NA	35056756	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35057198_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.39	chr7	+	3013	15	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	-21674	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.7734376185544	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	277	False	NA	22	True	AATAAA	-22	NA	35057032	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35057198_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090727_35091024
ES.30615.40	chr7	+	3149	13	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	-21659	0	intron_retention	FALSE	non_canonical	0	0	junction_1	41.928179333501	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	292	False	NA	22	True	AATAAA	-22	NA	35057047	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35057198_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084751_35084908_35090179
ES.30615.41	chr7	+	3345	14	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	-20732	0	intron_retention	FALSE	canonical	0	0	junction_1	30.8594830207457	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	1219	False	NA	22	True	AATAAA	-22	NA	35057974	35091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35058174_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ES.30615.42	chr7	+	1807	6	NNC	ENSMUSG00000030494.14	novel	3508	15	NA	NA	635	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.0003636351615	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTCTTTTTTCTTTT	NA	False	NA	21	True	AATAAA	-21	NA	35082624	35091709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35082820_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090721_35091018
ES.30615.44	chr7	+	2549	17	ISM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	13	8219	-7	-2106	5prime_fragment	FALSE	canonical	2	50	junction_16	33.5018073206506	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGTGTCACAAAGCATT	NA	False	NA	26	True	AATAAA	-32	NA	35096472	35129893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
ES.30615.45	chr7	+	2611	19	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	36.9808091706169	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096476	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.47	chr7	+	2799	20	FSM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	25	1	5	-1	multi-exon	FALSE	canonical	2	7	junction_17	42.1773724634719	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096484	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35129537_35131942_35132033_35134898_35135069_35137752
ES.30615.48	chr7	+	2618	19	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	40.3647337213447	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096484	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134882_35135069_35137752
ES.30615.49	chr7	+	1386	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	6	948	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	38.1133585396715	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCAGGGTCA	NA	False	NA	NA	False	NA	NA	NA	35096485	35121607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35121492
ES.30615.5	chr7	+	1866	16	NNC	ENSMUSG00000063931.15	novel	1881	15	NA	NA	30	54225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	93.3829867921466	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACTGTGCTTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	34611833	34798358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655_34744129_34798338
ES.30615.50	chr7	+	5205	19	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_12	41.7078315173127	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096485	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35132033_35134898_35135069_35137752
ES.30615.52	chr7	+	3744	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	8	-1142	8	1142	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTCTGTACTGATTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	35096487	35139256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.53	chr7	+	2010	16	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	9	1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	39.9731020673764	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCGTATACAAACGTGAC	NA	False	NA	NA	False	TATAAA	-6	NA	35096488	35128753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581
ES.30615.56	chr7	+	2425	18	NIC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.754349504152	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096502	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35096632_35097414_35097522_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.57	chr7	+	2503	16	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	23	-2121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.5148316382618	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGATATTGTCTGTACTCA	NA	False	NA	11	True	AATAAA	-17	NA	35096502	35129878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35115813_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339
ES.30615.59	chr7	+	2563	19	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	40.3308845292733	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATCACACACTTTTGCAT	NA	False	NA	-1	True	AATAAA	-9	NA	35096507	35138103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127785_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.6	chr7	+	959	10	NIC	ENSMUSG00000063931.15	novel	1881	15	NA	NA	47	-14	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	113.701797547058	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTTCTTTGTGGCTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	34611850	34680205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34679929
ES.30615.60	chr7	+	2840	21	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	61.0347442036091	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096517	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35125808_35125882_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35129537_35131942_35132033_35134898_35135069_35137752
ES.30615.61	chr7	+	2464	18	NIC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	38.007557070452	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096518	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.62	chr7	+	2604	19	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	40.1094182468253	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096518	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35126988_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.63	chr7	+	2914	21	NIC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	56.3667455154189	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096519	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35124469_35124620_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35129537_35131942_35132033_35134898_35135069_35137752
ES.30615.64	chr7	+	2244	15	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	53.6422389159734	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096526	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109094_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.65	chr7	+	2631	19	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.8966544361173	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35096527	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120455_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.66	chr7	+	3570	18	NNC	ENSMUSG00000023072.15	novel	547	6	NA	NA	4350	1140	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	40.217058130921	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGTCTGTACTGATT	NA	False	NA	NA	False	ATTAAA	-15	NA	35100904	35139254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35100984_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.67	chr7	+	2014	15	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	-6749	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.6136958381717	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGCATGTTTATTT	NA	False	NA	7	True	AATAAA	-17	NA	35109003	35138111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122833_35124084_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ES.30615.68	chr7	+	198	1	Intergenic	novelGene_25235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAGAACCTGTTAATA	1428	False	NA	NA	False	NA	NA	NA	35121442	35121640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_35121400_35121600
ES.30615.69	chr7	+	797	4	NNC	ENSMUSG00000023072.15	novel	2825	20	NA	NA	3773	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	58.6590904198905	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTTTTGCATGTTTAT	NA	False	NA	5	True	AATAAA	-15	NA	35131519	35138109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35131700_35131942_35132033_35134898_35135069_35137752
ES.30615.7	chr7	+	4694	19	NNC	ENSMUSG00000034867.17	novel	693	7	NA	NA	-663725	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	84.8870164133217	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	34621943	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_34622192_34781548_34781552_35310455_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.70	chr7	+	1999	15	NNC	ENSMUSG00000030492.17	novel	1940	13	NA	NA	-553	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.56347977784662	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATTATTTTTAGCTA	NA	False	NA	NA	False	AATGAA	-24	NA	35147667	35165435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35147849_35148488_35148572_35148773_35148880_35149174_35149312_35151793_35151942_35152818_35153062_35153478_35153605_35153982_35154083_35155001_35155047_35155538_35155663_35156432_35156537_35159271_35159369_35160199_35160350_35163020_35163196_35165255
ES.30615.71	chr7	+	1490	11	NIC	ENSMUSG00000030492.17	novel	1765	13	NA	NA	-103	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.38537208837531	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTTAATACTATTATT	NA	False	NA	NA	False	AATGAA	-16	NA	35149157	35165427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35149312_35152818_35153062_35153478_35153605_35153982_35154083_35155001_35155047_35155538_35155663_35156432_35156537_35159271_35159369_35160199_35160350_35163020_35163196_35165255
ES.30615.72	chr7	+	1013	5	ISM	ENSMUSG00000030492.17	ENSMUST00000032703.10	1940	13	7517	40	6851	-7	3prime_fragment	FALSE	canonical	1	1	junction_3	2.1650635094611	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATATTTGTTTAATACT	NA	False	NA	NA	False	AATGAA	-10	NA	35156111	35165421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_35156537_35159271_35159369_35160199_35160350_35163020_35163196_35165255
ES.30615.73	chr7	+	3127	1	Antisense	novelGene_ENSMUSG00000034875.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCATTGAGTTTACTCAA	NA	False	NA	NA	False	ATTAAA	-12	NA	35250526	35253653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_35250500_35253700
ES.30615.74	chr7	+	2160	1	FSM	ENSMUSG00000097509.2	ENSMUST00000181932.2	1569	1	-590	-1	-590	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGCAGTTGACTTTG	NA	False	NA	NA	False	NA	NA	NA	35254201	35256361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35254200_35256400
ES.30615.75	chr7	+	4309	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-125	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.8663845451951	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTTGTGTTTTGTTTT	NA	False	NA	32	True	AGTAAA	-24	NA	35285543	35338660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285686_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.76	chr7	+	3383	21	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-113	-4023	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	62.852605355705	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCCTGTCTGTTCCTT	NA	False	NA	NA	False	GATAAA	-27	NA	35285555	35322946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285686_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729
ES.30615.79	chr7	+	4318	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	-22	-12	-22	12	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTTTGTTTTTGT	NA	False	NA	35	True	AGTAAA	-27	NA	35285646	35338663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.8	chr7	+	1601	10	NNC	ENSMUSG00000063931.15	novel	705	6	NA	NA	-9285	54225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.335181067728	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACTGTGCTTTGCTGCT	4133	False	NA	NA	False	NA	NA	NA	34659422	34798358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_34659735_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655_34744129_34798338
ES.30615.82	chr7	+	4251	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_15	51.1070679843716	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGCCATTTTTGT	NA	False	NA	22	True	AGTAAA	-14	NA	35285664	35338650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315308_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.83	chr7	+	4126	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.7466785779562	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTGTGTCGTGCCATTTT	NA	False	NA	19	True	AGTAAA	-11	NA	35285665	35338647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285686_35291176_35291308_35299739_35299851_35300914_35301072_35301855_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.84	chr7	+	2744	25	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	1282	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	75.9944145425614	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACATAGAAATATAAT	NA	False	NA	NA	False	NA	NA	NA	35285665	35329156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285686_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35328951
ES.30615.85	chr7	+	4186	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_29	54.1250808382137	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285665	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
ES.30615.86	chr7	+	4339	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.982901845482	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285665	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35303987_35304079_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315308_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.87	chr7	+	4251	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	9	combination_of_known_junctions	FALSE	canonical	2	12	junction_20	54.7169546878799	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTTGTGTTTTGTTTT	NA	False	NA	32	True	AGTAAA	-24	NA	35285665	35338660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.88	chr7	+	4068	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	73.4026795203566	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTGCCATTTTTGTGTT	NA	False	NA	25	True	AGTAAA	-17	NA	35285665	35338653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285686_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35335655_35335735_35335954_35336028_35337438
ES.30615.9	chr7	+	1530	8	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	56861	9	-43	-8	3prime_fragment	FALSE	canonical	3	314	junction_5	28.3541740079564	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTCTTTCTGCCC	8677	False	NA	5	True	AATAAA	-10	NA	34668664	34744124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ES.30615.91	chr7	+	4081	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	56.0264732644059	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285671	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.93	chr7	+	4444	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	70.905108693066	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	False	NA	21	True	AGTAAA	-13	NA	35285672	35338649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35308049_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337442
ES.30615.94	chr7	+	4199	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	55.0821459838223	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTGTTTTGTTTTT	NA	False	NA	33	True	AGTAAA	-25	NA	35285672	35338661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337718_35337808
ES.30615.95	chr7	+	4358	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	55.23581173441	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCCATTTTTGTGTTTT	NA	False	NA	27	True	AGTAAA	-19	NA	35285674	35338655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302903_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.97	chr7	+	4168	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	57.061586828251	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTGTTTTGTTTTT	NA	False	NA	33	True	AGTAAA	-25	NA	35285674	35338661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30615.98	chr7	+	3216	11	NNC	ENSMUSG00000034867.17	novel	1926	12	NA	NA	0	-382	intron_retention	FALSE	non_canonical	0	0	junction_8	87.2986254187315	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTCTTTGGCCTTATT	NA	False	NA	NA	False	NA	NA	NA	35285674	35308157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35304472_35304603_35305330_35306525_35306605_35307745
ES.30615.99	chr7	+	4296	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.8663845451951	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCGTGCCATTTTT	NA	False	NA	20	True	AGTAAA	-12	NA	35285674	35338648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_35285795_35291155_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ES.30616.1	chr7	-	222	1	Intergenic	novelGene_25224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGAAACAGAGACTCA	NA	False	NA	NA	False	NA	NA	NA	34682832	34682610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34682600_34682800
ES.30617.1	chr7	-	175	1	Intergenic	novelGene_25225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	34705550	34705375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34705400_34705600
ES.30618.1	chr7	-	1803	3	NNC	ENSMUSG00000056216.10	novel	4709	2	NA	NA	7	26719	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGCTGCACTGCCCAG	NA	False	NA	NA	False	AAGAAA	-11	NA	34755991	34719127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34720628_34746025_34746138_34755800
ES.30618.10	chr7	-	1011	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	-8	3706	-8	187	multi-exon	FALSE	canonical	3	425	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCTCTTTTGTAGGAA	NA	False	NA	0	True	AATAAA	-16	NA	34756006	34749552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30618.11	chr7	-	1304	2	FSM	ENSMUSG00000056216.10	ENSMUST00000206505.2	399	2	-171	-734	-171	184	multi-exon	FALSE	canonical	2	26	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATGGCTCTTTTGTAG	NA	False	NA	-3	True	AATAAA	-13	NA	34755579	34749555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755077
ES.30618.2	chr7	-	4737	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	-26	-2	-26	2	multi-exon	FALSE	canonical	3	425	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTATCACGTGTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	34756024	34745844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30618.3	chr7	-	3740	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	-54	1023	-54	-1023	multi-exon	FALSE	canonical	3	425	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCTTCGTGGGTTTCT	NA	False	NA	-1	True	AATAAA	-22	NA	34756052	34746869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30618.4	chr7	-	3566	2	NNC	ENSMUSG00000056216.10	novel	4709	2	NA	NA	35	-1024	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTCTTCGTGGGTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	34755963	34746870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34750274_34755800
ES.30618.5	chr7	-	4001	2	FSM	ENSMUSG00000056216.10	ENSMUST00000070191.10	914	2	-226	-2861	-183	-1032	multi-exon	FALSE	canonical	1	12	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAACGACTTTTTCTTCG	NA	False	NA	-10	True	AATAAA	-13	NA	34755591	34746878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755069
ES.30618.6	chr7	-	4000	2	FSM	ENSMUSG00000056216.10	ENSMUST00000206505.2	399	2	-192	-3409	-192	-1034	multi-exon	FALSE	canonical	2	26	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACAACGACTTTTTCTT	NA	False	NA	-12	True	AATAAA	-11	NA	34755600	34746880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755077
ES.30618.7	chr7	-	1901	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	91	2717	91	757	multi-exon	FALSE	canonical	3	425	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGGTTTGAATCTTTAA	NA	False	NA	NA	False	AAGAAA	-10	NA	34755907	34748563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30618.8	chr7	-	1523	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	8	3178	8	296	multi-exon	FALSE	canonical	3	425	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTGGTCTTGGGCTTT	NA	False	NA	NA	False	AATACA	-18	NA	34755990	34749024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30618.9	chr7	-	1222	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	14	3473	14	1	multi-exon	FALSE	canonical	3	425	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	34755984	34749319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34750358_34755800
ES.30619.1	chr7	-	173	1	Intergenic	novelGene_25226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATGAAGTTATGCAA	NA	False	NA	NA	False	NA	NA	NA	34793563	34793390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34793400_34793600
ES.3062.1	chr10	-	4863	1	Intergenic	novelGene_2389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAATGAAAAGGTCACGG	NA	False	NA	NA	False	NA	NA	NA	70294339	70289476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70289500_70294300
ES.30620.1	chr7	-	5343	5	ISM	ENSMUSG00000001802.17	ENSMUST00000118444.3	3877	7	7169	-3	-4898	2	3prime_fragment	FALSE	canonical	3	23	junction_4	4.26468052730799	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTCCAGTCTCTACAA	NA	False	NA	NA	False	AATAAA	-19	NA	34907548	34900300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461
ES.30620.10	chr7	-	4321	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	-3	intron_retention	FALSE	canonical	3	19	junction_5	5.04700130990891	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCGGCTGTTCCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34914802	34900306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34902487_34902692_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ES.30620.11	chr7	-	4123	6	NIC	ENSMUSG00000001802.17	novel	3877	7	NA	NA	-43	-3	intron_retention	FALSE	canonical	3	5	junction_4	7.52595508889071	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCGGCTGTTCCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34914760	34900306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34903807_34904105_34904321_34905461_34905601_34912564_34912613_34914280
ES.30620.12	chr7	-	3698	7	NNC	ENSMUSG00000001802.17	novel	3877	7	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.97357620025145	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCGGCTGTTCCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34914746	34900306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34902095_34902353_34902487_34902897_34903807_34904105_34904321_34905461_34905601_34912564_34912613_34914280
ES.30620.13	chr7	-	3925	8	NNC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-57	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.55969429961235	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAATCGGCTGTTCCA	NA	False	NA	NA	False	AATAAA	-9	NA	34914774	34900310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34902030_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ES.30620.14	chr7	-	4629	6	NNC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	-1132	intron_retention	FALSE	canonical	0	0	junction_2	9.20869154657707	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCATTCTTTCTTACA	NA	False	NA	NA	False	AATACA	-18	NA	34914802	34901435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34902095_34902353_34902487_34902897_34904321_34905461_34905601_34910859_34912613_34914280
ES.30620.15	chr7	-	5134	3	NIC	ENSMUSG00000001802.17	novel	3877	7	NA	NA	-5325	-1138	intron_retention	FALSE	canonical	3	23	junction_2	1	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTGCATTCTTT	NA	False	NA	NA	False	AATACA	-12	NA	34907975	34901441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34904321_34905461
ES.30620.16	chr7	-	2820	8	FSM	ENSMUSG00000001802.17	ENSMUST00000122409.8	4147	8	188	1139	-18	-1138	multi-exon	FALSE	canonical	3	19	junction_6	4.69041575982343	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTCTGCATTCTTT	NA	False	NA	NA	False	AATACA	-12	NA	34914735	34901441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ES.30620.17	chr7	-	4547	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	102	-1139	intron_retention	FALSE	canonical	3	19	junction_6	4.56131072780134	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTGCCTCTGCATTCTT	NA	False	NA	NA	False	AATACA	-11	NA	34914821	34901442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
ES.30620.18	chr7	-	3092	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-86	-1140	intron_retention	FALSE	canonical	3	19	junction_5	2.49443825784929	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCTGCCTCTGCATTCT	NA	False	NA	NA	False	AATACA	-10	NA	34914803	34901443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ES.30620.2	chr7	-	5789	6	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	93	0	intron_retention	FALSE	canonical	3	19	junction_5	4.99599839871872	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	34914624	34900302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34902487_34902692_34904321_34905461_34905601_34910859_34912613_34914280
ES.30620.3	chr7	-	4139	8	FSM	ENSMUSG00000001802.17	ENSMUST00000122409.8	4147	8	8	0	8	0	multi-exon	FALSE	canonical	3	19	junction_6	4.69041575982343	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	34914915	34900302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ES.30620.4	chr7	-	5852	6	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-63	0	intron_retention	FALSE	canonical	3	19	junction_5	2.19089023002066	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	34914780	34900302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
ES.30620.5	chr7	-	5666	7	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-85	-1	intron_retention	FALSE	canonical	3	19	junction_6	4.56131072780134	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGGCTGTTCCAGTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	34914802	34900304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
ES.30620.6	chr7	-	3969	7	FSM	ENSMUSG00000001802.17	ENSMUST00000118444.3	3877	7	-93	1	-93	-1	multi-exon	FALSE	canonical	3	5	junction_5	8.76387788342327	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGGCTGTTCCAGTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	34914810	34900304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34912564_34912613_34914280
ES.30620.7	chr7	-	4259	6	NIC	ENSMUSG00000001802.17	novel	3877	7	NA	NA	-85	-2	intron_retention	FALSE	canonical	3	5	junction_4	9.47417542586161	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCGGCTGTTCCAGTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	34914802	34900305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34902487_34902692_34904321_34905461_34905601_34912564_34912613_34914280
ES.30620.8	chr7	-	4109	9	NNC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.3406073470516	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCGGCTGTTCCAGTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	34914753	34900305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910564_34910700_34910859_34910923_34912564_34912613_34914280
ES.30620.9	chr7	-	6017	5	NIC	ENSMUSG00000001802.17	novel	4147	8	NA	NA	67	-3	intron_retention	FALSE	canonical	3	19	junction_4	2.17944947177034	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCGGCTGTTCCAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	34914650	34900306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34902095_34902353_34904321_34905461_34905601_34910859_34912613_34914280
ES.30621.1	chr7	-	190	1	Intergenic	novelGene_25228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATGGAGGGAGGGG	114	False	NA	NA	False	NA	NA	NA	34952875	34952685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_34952700_34952900
ES.30622.1	chr7	-	3561	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	-496	0	-496	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35018361	34975960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.10	chr7	-	3048	20	NNC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	39.1004105510819	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017850	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009858_35010000_35017765
ES.30622.11	chr7	-	3487	19	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-538	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	40.1314583664397	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35018403	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34976237_34980756_34980906_34982995_34983094_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.12	chr7	-	4838	19	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	140	junction_16	13.4008706184835	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017845	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.14	chr7	-	3369	21	NNC	ENSMUSG00000063808.15	novel	2991	21	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.6617212498746	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTGCTTCTTG	NA	False	NA	NA	False	ATTAAA	-9	NA	35017853	34975969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34976379_34976705_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.15	chr7	-	3106	21	NNC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	50.9272765814156	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTGCTTCTTG	NA	False	NA	NA	False	ATTAAA	-9	NA	35017845	34975969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35008942_35009013_35009864_35010000_35017765
ES.30622.16	chr7	-	2600	18	ISM	ENSMUSG00000063808.15	ENSMUST00000131213.8	2991	21	-9	7057	-9	18	5prime_fragment	FALSE	canonical	3	140	junction_15	13.1528148999516	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAACACAGAAGAAA	NA	False	NA	27	True	AAAAAG	-36	NA	35017855	34983025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.17	chr7	-	9483	10	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-2	-5729	intron_retention	FALSE	canonical	3	140	junction_7	15.0332963783729	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35017848	34988805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34993259_34994679_34997114_34998645_34998726_35001002_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.18	chr7	-	175	1	Intergenic	novelGene_25230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	35015977	35015802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35015800_35016000
ES.30622.2	chr7	-	7279	19	NNC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-2	0	intron_retention	TRUE	non_canonical	0	0	junction_7	39.4580962290972	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35017848	34975960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34990005_34990123_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.3	chr7	-	3068	20	NNC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	38.8808820847695	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35017862	34975960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002647_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30622.5	chr7	-	3036	20	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_17	36.8645796112867	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017852	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007757_35008725_35008812_35009864_35010000_35017765
ES.30622.6	chr7	-	3018	20	NNC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	50.549884853734	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017823	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984260_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007757_35008725_35008812_35009864_35010000_35017765
ES.30622.7	chr7	-	3096	21	NNC	ENSMUSG00000063808.15	novel	2991	21	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	50.9430073709827	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017811	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35011454_35011548_35017765
ES.30622.8	chr7	-	2146	1	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	6630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	34978114	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34976000_34978100
ES.30622.9	chr7	-	6789	18	NIC	ENSMUSG00000063808.15	novel	3065	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	140	junction_15	13.5982901428705	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017864	34975968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34993259_34994679_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ES.30623.1	chr7	-	3153	3	Antisense	novelGene_ENSMUSG00000030494.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGAGCTGGCGACGCA	3157	False	NA	NA	False	NA	NA	NA	35046400	35037056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_35037438_35043542_35044874_35044959
ES.30623.2	chr7	-	240	1	Intergenic	novelGene_25231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTGAACAGATAAGGACC	NA	False	NA	NA	False	AAGAAA	-45	NA	35038650	35038410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35038400_35038600
ES.30624.1	chr7	-	177	1	Intergenic	novelGene_25232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCT	9676	False	NA	NA	False	NA	NA	NA	35046898	35046721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35046700_35046900
ES.30625.1	chr7	-	779	2	Antisense	novelGene_ENSMUSG00000030494.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAGTCTACCAACAGT	192	False	NA	NA	False	AATAAA	-19	NA	35056382	35055039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_35055559_35056122
ES.30626.1	chr7	-	176	1	Intergenic	novelGene_25233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35075984	35075808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35075800_35076000
ES.30627.1	chr7	-	2299	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	19	-461	19	461	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGCCTGTTTCGGTTT	NA	False	NA	NA	False	NA	NA	NA	35096242	35091115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ES.30627.2	chr7	-	1856	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	49	-48	49	48	multi-exon	FALSE	canonical	3	143	junction_2	4.92160768674447	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCGTGACTCTGTCACAG	NA	False	NA	NA	False	NA	NA	NA	35096212	35091528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ES.30627.3	chr7	-	1702	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	19	136	19	17	multi-exon	FALSE	canonical	3	143	junction_2	4.92160768674447	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACTCAAACAATGAACAT	NA	False	NA	NA	False	AATAAA	-21	NA	35096242	35091712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ES.30627.4	chr7	-	1689	4	NNC	ENSMUSG00000030493.14	novel	1857	4	NA	NA	29	17	intron_retention	FALSE	non_canonical	0	0	junction_2	71.4749373323731	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACTCAAACAATGAACAT	NA	False	NA	NA	False	AATAAA	-21	NA	35096232	35091712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35092517_35094399_35094546_35094657_35094802_35095637
ES.30627.5	chr7	-	2486	3	ISM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	44	163	44	-10	intron_retention	FALSE	canonical	3	143	junction_2	2.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGCAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	35096217	35091739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35092517_35094399_35094553_35094661
ES.30627.6	chr7	-	1774	3	FSM	ENSMUSG00000030493.14	ENSMUST00000141001.2	1690	3	-94	10	29	-10	multi-exon	FALSE	canonical	3	148	junction_1	3.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGCAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	35096232	35091739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35092517_35094399_35094802_35095637
ES.30627.7	chr7	-	1313	5	FSM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	-101	-381	27	-10	multi-exon	FALSE	canonical	3	12	junction_4	59.3316947339278	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGCAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	35096234	35091739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095757_35096110
ES.30627.8	chr7	-	1395	5	NNC	ENSMUSG00000030493.14	novel	831	5	NA	NA	29	-10	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	61.4913611818766	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGCAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	35096232	35091739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095841_35096110
ES.30628.1	chr7	-	174	1	Intergenic	novelGene_25234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGGAATGAAA	NA	False	NA	NA	False	NA	NA	NA	35098396	35098222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35098200_35098400
ES.30629.1	chr7	-	489	1	Antisense	novelGene_ENSMUSG00000023072.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAATTTTAAA	955	False	NA	NA	False	NA	NA	NA	35126969	35126480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_35126500_35127000
ES.3063.1	chr10	-	5655	1	Intergenic	novelGene_2390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70325058	70319403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70319400_70325100
ES.30630.1	chr7	-	7553	20	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	3536	2157	intron_retention	FALSE	canonical	2	3	junction_4	141.203473939672	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGTTCTGTGTCAAA	NA	False	NA	0	True	AATAAA	-24	NA	35200897	35166365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169677_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814
ES.30630.10	chr7	-	6193	29	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-5	2150	intron_retention	FALSE	canonical	0	0	junction_3	214.099165823042	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACAGTTTCTTGTTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	35236968	35166372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187133_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.11	chr7	-	5286	12	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	19379	2150	intron_retention	FALSE	canonical	2	6	junction_10	12.5368877206031	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACAGTTTCTTGTTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	35185054	35166372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35181972_35182464_35182565_35184629
ES.30630.12	chr7	-	5956	30	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-8	2150	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	214.333676983295	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACAGTTTCTTGTTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	35237126	35166372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.13	chr7	-	6191	31	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	1	2150	combination_of_known_junctions	FALSE	canonical	3	17	junction_19	212.327472446586	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACAGTTTCTTGTTCTG	NA	False	NA	-7	True	AATAAA	-17	NA	35237169	35166372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.14	chr7	-	3932	16	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	18543	2149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.8791784950177	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCACAGTTTCTTGTTCT	NA	False	NA	-8	True	AATAAA	-16	NA	35185890	35166373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35170825_35170842_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180542_35181892_35181972_35182464_35182565_35184629_35184851_35185024_35185165_35185844
ES.30630.15	chr7	-	4896	18	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	14525	2149	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	15.4422688689217	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCACAGTTTCTTGTTCT	NA	False	NA	-8	True	AATAAA	-16	NA	35189908	35166373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180542_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187133_35188061_35188190_35189354
ES.30630.16	chr7	-	9221	29	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	12	2149	intron_retention	FALSE	non_canonical	0	0	junction_5	214.667407081898	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCACAGTTTCTTGTTCT	NA	False	NA	-8	True	AATAAA	-16	NA	35237106	35166373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170618_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35188061_35188190_35188623_35188781_35189354_35189541_35190299_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.17	chr7	-	4574	2	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	33401	2148	intron_retention	FALSE	canonical	3	52	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCACAGTTTCTTGTTC	7259	False	NA	-9	True	AATAAA	-15	NA	35171032	35166374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35169158_35169241
ES.30630.18	chr7	-	5754	29	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-10	2148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	217.201472351908	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCACAGTTTCTTGTTC	NA	False	NA	-9	True	AATAAA	-15	NA	35237128	35166374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188618_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.19	chr7	-	5049	23	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-15	2148	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	182.438464662553	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCACAGTTTCTTGTTC	NA	False	NA	-9	True	AATAAA	-15	NA	35204448	35166374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400
ES.30630.2	chr7	-	6161	31	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-21	2156	combination_of_known_junctions	FALSE	canonical	3	17	junction_19	209.342221148901	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTTCTGTGTCAA	NA	False	NA	-1	True	AATAAA	-23	NA	35237139	35166366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193357_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.20	chr7	-	5435	17	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	15252	2146	intron_retention	FALSE	canonical	3	22	junction_16	9.35998798076151	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCACAGTTTCTTGT	NA	False	NA	-11	True	AATAAA	-13	NA	35189181	35166376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061
ES.30630.21	chr7	-	10367	27	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	0	1406	intron_retention	FALSE	canonical	1	2	junction_10	217.044404831452	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTCTGTTACTCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	35237118	35167116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169677_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180542_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.22	chr7	-	4014	30	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	8	-441	combination_of_known_junctions	FALSE	canonical	3	17	junction_18	214.454255784349	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGATCTTGGTGCTAAAT	NA	False	NA	NA	False	AATGAA	-17	NA	35237110	35168963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.23	chr7	-	3804	26	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-25	-3879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.100964428343	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATGGCCTTTGGTCAA	NA	False	NA	NA	False	ATTAAA	-10	NA	35237143	35174495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35174889_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.24	chr7	-	3417	22	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-25	-10684	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	225.048455351811	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGGATGTTCTGGGAG	NA	False	NA	NA	False	NA	NA	NA	35237143	35181300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35181972_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.25	chr7	-	3049	22	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	17	-11062	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	225.048455351811	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAAGGCCCACCCATTC	NA	False	NA	NA	False	ATTAAA	-22	NA	35237153	35181678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35181972_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.26	chr7	-	1652	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	140.605714471883	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAATATTTTGTGATT	NA	False	NA	-3	True	AATAAA	-43	NA	35237113	35193026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193357_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.27	chr7	-	1639	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	-16	-3	-16	0	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCTCTTAAAATATTT	NA	False	NA	-10	True	AATAAA	-36	NA	35237186	35193033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.28	chr7	-	1503	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	1526	-12	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	140.459223223075	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35235436	35193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35235309
ES.30630.29	chr7	-	5102	11	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-10	-12	intron_retention	FALSE	canonical	0	0	junction_8	183.677870196711	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35237128	35193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35225610_35225719_35228537_35228697_35236938
ES.30630.3	chr7	-	6950	16	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	13917	2152	intron_retention	FALSE	canonical	3	22	junction_15	9.338094023943	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGTTTCTTGTTCTGTG	NA	False	NA	-5	True	AATAAA	-19	NA	35190516	35166370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061
ES.30630.30	chr7	-	1570	12	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-20	-12	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	138.171351278221	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35237138	35193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193357_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.31	chr7	-	2321	11	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-20	-12	intron_retention	FALSE	canonical	3	378	junction_5	48.104469646801	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35237138	35193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.32	chr7	-	2643	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	15	-12	intron_retention	FALSE	canonical	0	0	junction_1	180.500360568308	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCTTGCTTCTAAAAT	NA	False	NA	-25	True	AATAAA	-21	NA	35237103	35193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193757_35196801_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.34	chr7	-	5081	11	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-6	-14	intron_retention	FALSE	canonical	0	0	junction_3	189.584519410209	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATTCTTGCTTCTAAA	NA	False	NA	-27	True	AATAAA	-19	NA	35237124	35193050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35204496_35207689_35207783_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.36	chr7	-	1140	8	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	12	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	173.31533135194	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGAATTCTTGCTTCT	NA	False	NA	-30	True	AATAAA	-16	NA	35237106	35193053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35228537_35228697_35236938
ES.30630.37	chr7	-	4245	11	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-12	11	intron_retention	FALSE	canonical	3	378	junction_5	47.6717945959663	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCAGAATTCTTGCTTC	NA	False	NA	-31	True	AATAAA	-15	NA	35237130	35193054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193363_35193695_35193757_35200814_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.38	chr7	-	1635	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-22	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	180.087490215815	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237140	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223479_35228537_35228697_35236938
ES.30630.39	chr7	-	4996	10	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-19	10	intron_retention	FALSE	canonical	3	378	junction_4	47.0793918376445	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237137	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193363_35193695_35193757_35200814_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.4	chr7	-	6983	29	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-3	2151	intron_retention	FALSE	canonical	3	17	junction_17	215.034272897155	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	35237121	35166371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35180630_35182464_35182565_35184629_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.40	chr7	-	1434	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-20	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.129691994639	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237138	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228672_35228697_35236938
ES.30630.41	chr7	-	1857	11	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-8	10	intron_retention	FALSE	canonical	0	0	junction_4	150.310644998949	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237126	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193757_35200814_35200896_35203578_35203656_35204400_35204463_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.42	chr7	-	1643	13	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	14	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	177.444748834359	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237104	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35225610_35225719_35228537_35228697_35236938
ES.30630.43	chr7	-	2391	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-4	10	intron_retention	FALSE	canonical	0	0	junction_4	185.694942231198	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237122	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35204496_35207689_35207783_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.44	chr7	-	1591	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	1516	10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	181.833272101052	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35235446	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35235309
ES.30630.46	chr7	-	1599	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-23	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.356401500734	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCAGAATTCTTGCTT	NA	False	NA	-32	True	AATAAA	-14	NA	35237141	35193055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204523_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.48	chr7	-	1728	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	5	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	182.976130855393	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGCAGAATTCTTGCT	NA	False	NA	-33	True	AATAAA	-13	NA	35237113	35193056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236838
ES.30630.49	chr7	-	3152	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-6	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	186.402922688398	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGCAGAATTCTTGCT	NA	False	NA	-33	True	AATAAA	-13	NA	35237124	35193056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221434_35223362_35223500_35228537_35228697_35235309
ES.30630.5	chr7	-	3219	3	ISM	ENSMUSG00000030491.17	ENSMUST00000193633.6	3651	30	66815	-2151	34286	2151	intron_retention	FALSE	canonical	3	52	junction_2	2.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	8144	False	NA	-6	True	AATAAA	-18	NA	35170147	35166371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35168618_35169090_35169158_35169241
ES.30630.50	chr7	-	5301	9	NIC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	8	9	intron_retention	FALSE	canonical	3	378	junction_3	49.5048924349907	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGCAGAATTCTTGCT	NA	False	NA	-33	True	AATAAA	-13	NA	35237110	35193056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35193757_35200814_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.51	chr7	-	1470	11	NNC	ENSMUSG00000030491.17	novel	1412	11	NA	NA	1391	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	145.840357926056	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTGCAGAATTCTTGC	NA	False	NA	-34	True	AATAAA	-12	NA	35235571	35193057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35235309
ES.30630.52	chr7	-	1553	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	-13	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.356401500734	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATTGCAGAATTCTTG	NA	False	NA	-35	True	AATAAA	-11	NA	35237131	35193058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204490_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.54	chr7	-	1838	9	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	25	111	multi-exon	FALSE	canonical	0	0	junction_2	196.350292844192	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGGTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	35237145	35196768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_35197571_35200814_35200896_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.55	chr7	-	1990	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	-8	110	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGCTTTTGGTTAGTA	NA	False	NA	NA	False	NA	NA	NA	35237126	35196769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ES.30630.56	chr7	-	1371	4	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	-20	-13267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	236.584492776306	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCCGAGTTGCAGTAG	NA	False	NA	NA	False	AATAAA	-21	NA	35237138	35221467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35222343_35223362_35223500_35228537_35228697_35236938
ES.30630.6	chr7	-	5080	7	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	31283	2151	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	17.2336879396141	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	5141	False	NA	-6	True	AATAAA	-18	NA	35173150	35166371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35170825
ES.30630.7	chr7	-	6091	31	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	1527	2151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	208.760692340935	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	35235435	35166371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186712_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35235309
ES.30630.8	chr7	-	3367	9	NNC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	24530	2151	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	15.4712434858999	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	35179903	35166371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169673_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565
ES.30631.1	chr7	-	1927	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	370	1	370	-1	multi-exon	FALSE	canonical	3	351	junction_1	2	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTTTATTCTAC	NA	False	NA	1	True	ATTAAA	-28	NA	35255359	35246610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35247549_35250878_35251087_35254578
ES.30631.2	chr7	-	1368	3	NNC	ENSMUSG00000034875.6	novel	2298	3	NA	NA	460	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	174.5	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTTTATTCTA	NA	False	NA	0	True	ATTAAA	-27	NA	35255269	35246611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35247549_35250878_35251087_35255046
ES.30631.3	chr7	-	4746	2	FSM	ENSMUSG00000034875.6	ENSMUST00000123469.2	738	2	-3223	-785	-72	-6	multi-exon	FALSE	canonical	3	351	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTTGTATTTTTTAT	NA	False	NA	-4	True	ATTAAA	-23	NA	35254691	35246615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35247549_35250878
ES.30631.4	chr7	-	5161	2	NIC	ENSMUSG00000034875.6	novel	2298	3	NA	NA	460	-7	intron_retention	FALSE	canonical	3	355	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAAGTTGTATTTTTTA	NA	False	NA	-5	True	ATTAAA	-22	NA	35255269	35246616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35251087_35254578
ES.30631.5	chr7	-	1275	3	NNC	ENSMUSG00000034875.6	novel	2298	3	NA	NA	-103	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.5	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAAGTTGTATTTTTT	NA	False	NA	-6	True	ATTAAA	-21	NA	35254722	35246617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35247541_35250878_35251087_35254578
ES.30631.6	chr7	-	1518	3	FSM	ENSMUSG00000034875.6	ENSMUST00000142930.2	733	3	-463	-322	-463	-14	multi-exon	FALSE	canonical	3	20	junction_2	165.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGACATCCAAGTTGTA	NA	False	NA	-12	True	ATTAAA	-15	NA	35255082	35246623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35247549_35250878_35250968_35254578
ES.30631.7	chr7	-	1357	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	421	520	421	-184	multi-exon	FALSE	canonical	3	351	junction_1	2	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGACAGTTGTTTTATTA	NA	False	NA	8	True	AGTAAA	-26	NA	35255308	35247129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35247549_35250878_35251087_35254578
ES.30631.8	chr7	-	843	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	827	628	-283	163	multi-exon	FALSE	canonical	3	351	junction_1	2	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCATGTGTGTTTT	NA	False	NA	-1	True	CATAAA	-18	NA	35254902	35247237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35247549_35250878_35251087_35254578
ES.30631.9	chr7	-	4151	2	NIC	ENSMUSG00000034875.6	novel	2298	3	NA	NA	-263	161	intron_retention	FALSE	canonical	3	355	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTGTCATGTGTGTT	NA	False	NA	-3	True	CATAAA	-16	NA	35254882	35247239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35251087_35254578
ES.30632.1	chr7	-	6597	1	FSM	ENSMUSG00000056043.6	ENSMUST00000069912.6	6590	1	-7	0	-7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATTGTGTTATTAAAAA	NA	False	NA	5	True	AATAAA	-30	NA	35285014	35278417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35278400_35285000
ES.30633.1	chr7	-	1191	1	Antisense	novelGene_ENSMUSG00000034867.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGACAGGAAGTACTTTG	NA	False	NA	NA	False	NA	NA	NA	35306268	35305077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_35305100_35306300
ES.30634.1	chr7	-	185	1	Intergenic	novelGene_25237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	35334617	35334432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35334400_35334600
ES.30635.1	chr7	-	911	8	NNC	ENSMUSG00000030417.16	novel	684	6	NA	NA	-6675	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	839.355948429071	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTGCATTTTG	NA	False	NA	NA	False	NA	NA	NA	35353621	35341406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730_35347010_35347764_35347878_35353570
ES.30635.10	chr7	-	5192	2	NNC	ENSMUSG00000030417.16	novel	675	2	NA	NA	-6	-200	intron_retention	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGACATACCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	35346935	35341640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35342893_35342995
ES.30635.2	chr7	-	4928	3	NNC	ENSMUSG00000030417.16	novel	602	2	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	938	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGGGTGTTTCAGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	35346898	35341438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35341611_35342039_35342893_35342995
ES.30635.3	chr7	-	2872	4	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	88	-1	intron_retention	FALSE	canonical	3	1740	junction_2	72.2280339541988	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346803	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35341611_35342039_35342112_35343048_35345607_35346730
ES.30635.4	chr7	-	2088	5	NNC	ENSMUSG00000030417.16	novel	684	6	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	804.517673826996	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346916	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35341611_35342039_35342893_35342995_35343838_35345568_35345607_35346730
ES.30635.5	chr7	-	3835	4	NNC	ENSMUSG00000030417.16	novel	684	6	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	891.510079708705	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346932	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35341611_35342039_35342893_35342995_35345607_35346730
ES.30635.6	chr7	-	527	5	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	798.032894058885	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346916	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35341611_35342039_35342112_35343775_35343838_35345568_35345607_35346730
ES.30635.7	chr7	-	2194	4	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1783	junction_2	52.3641098463442	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346919	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35341611_35342039_35343838_35345568_35345607_35346730
ES.30635.8	chr7	-	3965	3	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	1876	junction_1	15	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTGGGTGTTTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35346959	35341441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35341611_35342039_35345607_35346730
ES.30635.9	chr7	-	1222	5	NIC	ENSMUSG00000030417.16	novel	684	6	NA	NA	5	-3	intron_retention	FALSE	canonical	3	1740	junction_2	67.3512249331814	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACAGTTTGGGTGTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	35346886	35341443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35341611_35342039_35342112_35343048_35343838_35345568_35345607_35346730
ES.30636.1	chr7	-	174	1	Intergenic	novelGene_25238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35378954	35378780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35378800_35379000
ES.30637.1	chr7	+	190	1	Intergenic	novelGene_25239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	35409388	35409578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_35409400_35409600
ES.30638.1	chr7	-	5326	1	ISM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	63624	340	17262	-340	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATCTGTGGTGTCCTCT	6543	False	NA	NA	False	GATAAA	-10	NA	35390255	35384929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35384900_35390300
ES.30638.10	chr7	-	3411	18	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-13	1131	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	5.11933711106696	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCCTCCCGCTCTTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	35453837	35389018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.12	chr7	-	3606	20	NNC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-5	1124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.91069269110167	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAACTTTTCCCTCCCG	NA	False	NA	NA	False	ATTAAA	-16	NA	35453785	35389025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35451834_35451965_35452039_35452182_35453679
ES.30638.13	chr7	-	3218	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	-15	4803	-15	757	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTCATTTCAATTAACT	NA	False	NA	NA	False	AGTAAA	-18	NA	35453894	35389392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.14	chr7	-	2685	16	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	4530	753	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	5.30241035337285	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTACTCATTTCAATT	NA	False	NA	NA	False	AGTAAA	-14	NA	35449250	35389396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164
ES.30638.15	chr7	-	2796	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	42	5168	-13	392	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGTGTGAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	35453837	35389757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.16	chr7	-	159	1	Intergenic	novelGene_25240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35416658	35416499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35416500_35416700
ES.30638.17	chr7	-	214	1	Intergenic	novelGene_25241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAAAACCCAGAAATAGC	NA	False	NA	NA	False	NA	NA	NA	35418788	35418574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35418600_35418800
ES.30638.18	chr7	-	1147	7	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	14	-1844	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.61857655055493	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGATGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	35453865	35420778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.19	chr7	-	705	4	ISM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	27052	36193	-2058	-1848	internal_fragment	FALSE	canonical	3	11	junction_1	1.63299316185545	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATGTGTGTGGATGCT	NA	False	NA	NA	False	NA	NA	NA	35426827	35420782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35421105_35422131_35422256_35424715_35424862_35426714
ES.30638.2	chr7	-	4666	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	43	3297	-12	2263	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCACACCCTTGCCA	NA	False	NA	NA	False	AATAAA	-15	NA	35453836	35387886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.3	chr7	-	4362	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	7	3637	7	1923	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTTATAAAATACTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	35453872	35388226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.4	chr7	-	4275	19	NNC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-9	1882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	4.98051759916131	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTAAATAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	35453833	35388267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453686
ES.30638.5	chr7	-	4151	18	NIC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-2	1882	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	5.11933711106696	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTAAATAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	35453826	35388267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.6	chr7	-	6596	18	NNC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-22	1882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.04367037131356	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTAAATAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	35453901	35388267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35404674_35406112_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.7	chr7	-	4130	18	NNC	ENSMUSG00000043671.15	novel	8006	19	NA	NA	-9	1863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	6.09668353886032	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATTATATATTTA	NA	False	NA	NA	False	NA	NA	NA	35453833	35388286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35390368_35392201_35392352_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.8	chr7	-	3776	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	46	4184	-9	1376	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCCTCCTCTGGACC	NA	False	NA	NA	False	ATTAAA	-21	NA	35453833	35388773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30638.9	chr7	-	3616	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	-26	4416	-26	1144	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCCATTTGGAAGTGA	NA	False	NA	NA	False	ATTAAA	-36	NA	35453905	35389005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ES.30639.1	chr7	+	3906	1	Antisense	novelGene_ENSMUSG00000044452.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAACAAGGGACAGA	6857	False	NA	NA	False	NA	NA	NA	35472995	35476901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_35473000_35476900
ES.3064.1	chr10	-	4381	1	FSM	ENSMUSG00000112273.2	ENSMUST00000219398.2	369	1	-3556	-456	-3556	456	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAGATACTTCAAAATAT	NA	False	NA	NA	False	NA	NA	NA	70344634	70340253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70340300_70344600
ES.30640.10	chr7	-	7803	6	ISM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	186	9	151	-9	3prime_fragment	FALSE	canonical	3	57	junction_5	5.70613704707484	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACTTGTTTCTAA	NA	False	NA	NA	False	AATAAA	-12	NA	35502228	35471776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862
ES.30640.14	chr7	-	4699	5	NIC	ENSMUSG00000044452.11	novel	944	6	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	8	junction_3	25.9265790261654	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAAACCACTTGTTTC	NA	False	NA	NA	False	AATAAA	-9	NA	35502418	35471779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35475998_35487142_35487258_35491072_35491188_35500862_35500954_35502258
ES.30640.15	chr7	-	5394	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	16	1283	-6	101	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGTGGCTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	35502398	35473050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.16	chr7	-	5029	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-29	1693	-15	-309	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGGTAGCTTTTTG	NA	False	NA	NA	False	ACTAAA	-15	NA	35502443	35473460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.17	chr7	-	4407	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-4	2290	-4	-906	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAATTTTGGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	35502418	35474057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.18	chr7	-	3611	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-29	3111	-15	520	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGACTCAAACCAAATC	NA	False	NA	NA	False	AGTAAA	-26	NA	35502443	35474878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.19	chr7	-	3442	7	NNC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	3	237	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	24.4863907780084	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCCACACTGGTGTGA	NA	False	NA	NA	False	NA	NA	NA	35502425	35475161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502126
ES.30640.2	chr7	-	6727	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-34	0	-20	0	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTAAGTTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	35502448	35471767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.20	chr7	-	3310	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	-11	3394	3	237	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGCCACACTGGTGTGA	NA	False	NA	NA	False	NA	NA	NA	35502425	35475161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.21	chr7	-	10666	1	NIC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	4468	-96	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGCTGGGATCAGTTA	NA	False	NA	NA	False	NA	NA	NA	35489001	35478335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35478300_35489000
ES.30640.22	chr7	-	2358	4	ISM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	66	19339	31	40	5prime_fragment	FALSE	canonical	3	57	junction_2	4.64279609239471	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGATGCCGCTGATGGAAA	NA	False	NA	NA	False	NA	NA	NA	35502348	35491106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.3	chr7	-	6828	8	NNC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.3542751466929	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTTTCTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	35502421	35471769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35499232_35499363_35500862_35500954_35502258
ES.30640.5	chr7	-	6585	6	NIC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	25.6093732840146	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	35502400	35471770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35502258
ES.30640.7	chr7	-	4598	6	FSM	ENSMUSG00000044452.11	ENSMUST00000187282.3	944	6	-26	-3628	-4	-3	multi-exon	FALSE	canonical	3	8	junction_4	23.3957261054236	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	35502418	35471770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35500862_35500954_35502258
ES.30640.8	chr7	-	6784	6	NIC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	57	junction_4	5.70613704707484	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	35502398	35471770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ES.30640.9	chr7	-	6165	7	NNC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.2899156029822	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTTTCTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	35502423	35471770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35493481_35495044_35500862_35500954_35502258
ES.30641.1	chr7	-	179	1	Intergenic	novelGene_25242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACAAAATTCTTATG	NA	False	NA	NA	False	NA	NA	NA	35542294	35542115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35542100_35542300
ES.30642.1	chr7	-	162	1	Intergenic	novelGene_25243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	35596894	35596732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_35596700_35596900
ES.30643.1	chr7	+	621	1	FSM	ENSMUSG00000066543.9	ENSMUST00000119541.2	555	1	-36	-30	-36	30	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	35817662	35818283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_35817700_35818300
ES.30644.1	chr7	+	182	1	Intergenic	novelGene_25244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	35972637	35972819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_35972600_35972800
ES.30645.1	chr7	+	178	1	Intergenic	novelGene_25245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAGAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	36290793	36290971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_36290800_36291000
ES.30646.1	chr7	-	1677	1	Intergenic	novelGene_25246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36413000	36411323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_36411300_36413000
ES.30646.2	chr7	-	444	1	Intergenic	novelGene_25247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAATTTCTCAGAACCT	NA	False	NA	NA	False	AAGAAA	-29	NA	36413000	36412556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_36412600_36413000
ES.30647.1	chr7	+	4185	1	ISM	ENSMUSG00000021217.8	ENSMUST00000021641.8	5098	2	71249	2	71150	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGACTCGGTTGCTG	NA	False	NA	NA	False	ATTAAA	-23	NA	36468791	36472976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_36468800_36473000
ES.30648.1	chr7	-	665	1	NIC	ENSMUSG00000100616.2	novel	410	4	NA	NA	17	-2690	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTTCTGCTCACGGA	NA	False	NA	NA	False	AATAAA	-25	NA	36839790	36839125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_36839100_36839800
ES.30649.1	chr7	-	175	1	Intergenic	novelGene_25248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATACTAAGCC	NA	False	NA	NA	False	NA	NA	NA	36947864	36947689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_36947700_36947900
ES.3065.1	chr10	-	2021	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	2	854	1	341	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTCTGATTCATAAACA	NA	False	NA	0	True	ATTAAA	-17	NA	70435119	70394365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
ES.3065.2	chr10	-	3601	4	NIC	ENSMUSG00000037747.10	novel	2877	5	NA	NA	-15	158	intron_retention	FALSE	canonical	3	11	junction_1	2.49443825784929	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTGTACGTTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	70435136	70394548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_70395612_70401003_70401122_70404731_70406850_70434834
ES.3065.3	chr10	-	1898	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	-64	1043	-64	152	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTTTATTTGTACG	NA	False	NA	NA	False	AATAAA	-9	NA	70435185	70394554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
ES.3065.4	chr10	-	1713	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	-34	1198	-34	-3	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCGCATGAGAGAGAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	70435155	70394709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
ES.3065.5	chr10	-	891	1	Intergenic	novelGene_2391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-28	NA	70421749	70420858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70420900_70421700
ES.30650.1	chr7	+	140	1	Intergenic	novelGene_25249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	36965581	36965721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_36965600_36965700
ES.30651.1	chr7	+	5408	4	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGCTTATTGTACTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	37139206	37149861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_37139540_37143048_37143145_37143522_37143640_37144999
ES.30652.1	chr7	+	1650	3	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	6	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTCAACTTCTATTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	37177957	37181234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_37178037_37179528_37179678_37179812
ES.30652.2	chr7	+	1748	3	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGCACTCAACTTCTA	NA	False	NA	NA	False	ATTAAA	-11	NA	37178998	37181229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_37179181_37179528_37179678_37179812
ES.30652.3	chr7	+	1802	2	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCAACTTCTATTGTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	37179189	37181236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_37179284_37179528
ES.30652.4	chr7	+	898	3	Antisense	novelGene_ENSMUSG00000043456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	2.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTTTCTTTGCAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	37179221	37195912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_37179284_37179528_37179682_37195229
ES.30653.1	chr7	+	4382	1	Intergenic	novelGene_25250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCTGGTACCTTATAAC	NA	False	NA	NA	False	AATATA	-22	NA	37198601	37202983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37198600_37203000
ES.30654.1	chr7	+	3184	1	Intergenic	novelGene_25251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTTACTGTGTCTTAC	NA	False	NA	NA	False	NA	NA	NA	37654571	37657755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37654600_37657800
ES.30655.1	chr7	+	174	1	Intergenic	novelGene_25252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAACTGACAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	37705352	37705526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37705400_37705500
ES.30656.1	chr7	+	412	1	Intergenic	novelGene_25253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATGAAGTTGGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	37717060	37717472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37717100_37717500
ES.30657.10	chr7	-	3360	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	12	0	intron_retention	FALSE	canonical	1	1	junction_6	295.703221256936	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718979	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.11	chr7	-	3421	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718983	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
ES.30657.12	chr7	-	3660	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	11	0	intron_retention	FALSE	canonical	1	1	junction_10	358.778068559575	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718980	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37716520_37716728_37718534
ES.30657.13	chr7	-	3206	9	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	309.956448553664	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718948	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37696111_37696147_37718534
ES.30657.14	chr7	-	3855	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_4	277.518449837123	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718930	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665394_37666682_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.15	chr7	-	3220	8	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-6	0	intron_retention	FALSE	canonical	2	6	junction_7	326.47661415764	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37718997	37659417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37718534
ES.30657.17	chr7	-	3444	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	360.688551807454	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718920	37659418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37716810_37716863_37718534
ES.30657.18	chr7	-	3141	10	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	296.283439535877	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718951	37659418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718781
ES.30657.19	chr7	-	3471	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-17	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	281.146296436571	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37719008	37659418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681044_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.2	chr7	-	3814	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	128	556	combination_of_known_splicesites	FALSE	canonical	3	145	junction_9	251.968251968378	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGATTTTAATCTGAGA	NA	False	NA	NA	False	NA	NA	NA	37718819	37658860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
ES.30657.20	chr7	-	3140	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	276.86032579624	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718984	37659418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718850
ES.30657.21	chr7	-	3202	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_10	275.676549601159	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAGCCTGCTTTATC	NA	False	NA	-7	True	ATTAAA	-22	NA	37718977	37659418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718781
ES.30657.24	chr7	-	3494	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_4	277.518449837123	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGAGCCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-21	NA	37718964	37659419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666686_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.25	chr7	-	3353	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	48	junction_1	265.936383370159	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGAGCCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-21	NA	37718976	37659419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.26	chr7	-	3312	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-11	-3	intron_retention	FALSE	canonical	2	36	junction_4	259.862233049147	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGAGCCTGCTTTA	NA	False	NA	-9	True	ATTAAA	-20	NA	37718978	37659420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37664795_37664930_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.28	chr7	-	4967	10	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	20858	4	20838	-3	3prime_fragment	FALSE	canonical	3	853	junction_5	47.7240007429551	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGAGCCTGCTTTA	NA	False	NA	-9	True	ATTAAA	-20	NA	37698109	37659420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111
ES.30657.3	chr7	-	5256	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	8	554	intron_retention	FALSE	canonical	3	13	junction_10	278.340241431238	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTGATTTTAATCTGA	NA	False	NA	NA	False	NA	NA	NA	37718983	37658862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289
ES.30657.30	chr7	-	3437	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	282.189014669246	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTTTGAGCCTGCTT	NA	False	NA	-11	True	ATTAAA	-18	NA	37718930	37659422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696186_37718534
ES.30657.33	chr7	-	3583	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1	junction_11	358.017382652004	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTTTGAGCCTGCTT	NA	False	NA	-11	True	ATTAAA	-18	NA	37718966	37659422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289_37717439_37718534
ES.30657.34	chr7	-	3397	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	282.189014669246	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATTTTGAGCCTGCT	NA	False	NA	-12	True	ATTAAA	-17	NA	37718936	37659423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718540
ES.30657.35	chr7	-	4552	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-9	-6	intron_retention	FALSE	canonical	2	13	junction_11	351.342995983193	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATTTTGAGCCTGCT	NA	False	NA	-12	True	ATTAAA	-17	NA	37718976	37659423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37664795_37664930_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289
ES.30657.37	chr7	-	3104	7	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	11	-7	intron_retention	FALSE	canonical	1	12	junction_6	348.788219729713	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTATTTTGAGCCTGC	NA	False	NA	-13	True	ATTAAA	-16	NA	37718980	37659424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37718534
ES.30657.38	chr7	-	3605	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	361.753123433716	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTATTTTGAGCCTGC	NA	False	NA	-13	True	ATTAAA	-16	NA	37718948	37659424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37691018_37691210_37696111_37696147_37718534
ES.30657.39	chr7	-	3121	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	281.814548950192	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTATTTTGAGCCTGC	NA	False	NA	-13	True	ATTAAA	-16	NA	37718930	37659424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664930_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.42	chr7	-	2801	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-10	650	-10	0	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATATTATATTTACTTG	NA	False	NA	NA	False	AGTAAA	-19	NA	37718977	37660066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.43	chr7	-	2672	12	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	0	-268	intron_retention	FALSE	canonical	1	1	junction_11	358.017382652004	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGTGTATAAAATGTCT	NA	False	NA	20	True	NA	NA	NA	37718967	37660334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289_37717439_37718534
ES.30657.44	chr7	-	2534	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-30	937	-6	-287	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGAACTTCCTGGTTTA	NA	False	NA	1	True	AGTAAA	-28	NA	37718997	37660353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.45	chr7	-	2478	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-10	-288	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	0	True	AGTAAA	-27	NA	37718977	37660354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
ES.30657.46	chr7	-	2529	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-6	-288	intron_retention	FALSE	canonical	0	0	junction_6	423.772198277633	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	0	True	AGTAAA	-27	NA	37718973	37660354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37664795_37664930_37665005_37665112_37665304_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
ES.30657.47	chr7	-	3908	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	11	-288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	407.290563732804	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	0	True	AGTAAA	-27	NA	37718936	37660354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37665112_37665304_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289
ES.30657.48	chr7	-	3747	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	1	-288	intron_retention	FALSE	canonical	3	13	junction_10	278.340241431238	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	0	True	AGTAAA	-27	NA	37718966	37660354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37717289
ES.30657.49	chr7	-	2344	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	6	-292	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	349.4150667743	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718941	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
ES.30657.5	chr7	-	3487	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-43	-3	-19	3	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTGCTTTATCTATTT	NA	False	NA	-2	True	ATTAAA	-27	NA	37719010	37659413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.50	chr7	-	2098	10	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-13523	-292	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_4	285.729259748705	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37682576	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37664795_37664930_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294
ES.30657.51	chr7	-	2385	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-1	-292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	270.072380870556	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718948	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534_37718640_37718734
ES.30657.52	chr7	-	2500	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-11	-292	intron_retention	FALSE	canonical	0	0	junction_6	377.631314909132	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718978	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668856_37669026_37669123_37681035_37681172_37682294_37682363_37696107_37696147_37718534
ES.30657.53	chr7	-	2404	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	1	-292	intron_retention	FALSE	canonical	3	48	junction_1	265.936383370159	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718966	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.54	chr7	-	2543	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-5	-292	intron_retention	FALSE	canonical	0	0	junction_10	282.189014669246	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718972	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696186_37718534
ES.30657.55	chr7	-	2197	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	10	-292	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	276.86032579624	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718981	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718850
ES.30657.56	chr7	-	2159	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-11	-292	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	295.041281899146	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTGAACTTCCTG	NA	False	NA	-4	True	AGTAAA	-23	NA	37718978	37660358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718850
ES.30657.57	chr7	-	2716	12	NNC	ENSMUSG00000030421.10	novel	2453	12	NA	NA	-11	-293	intron_retention	FALSE	canonical	1	1	junction_10	358.778068559575	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTGTGAACTTCCT	NA	False	NA	-5	True	AGTAAA	-22	NA	37718978	37660359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37716520_37716728_37718534
ES.30657.58	chr7	-	2260	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-9	-293	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_10	275.676549601159	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTGTGAACTTCCT	NA	False	NA	-5	True	AGTAAA	-22	NA	37718976	37660359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718781
ES.30657.6	chr7	-	4383	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	364.580087223644	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718950	37659416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37662135_37662817_37662958_37664655_37665005_37665112_37665304_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.60	chr7	-	2172	10	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	20	-297	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	296.283439535877	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAAATGTTGTGAACT	NA	False	NA	-9	True	AGTAAA	-18	NA	37718927	37660363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718781
ES.30657.63	chr7	-	2272	8	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-5	-298	intron_retention	FALSE	canonical	2	6	junction_7	326.47661415764	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAAAATGTTGTGAAC	NA	False	NA	-10	True	AGTAAA	-17	NA	37718996	37660364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37718534
ES.30657.64	chr7	-	2395	11	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	17	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	283.234884857074	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCTAAAATGTTGTGAA	NA	False	NA	-11	True	AGTAAA	-16	NA	37718930	37660365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666855_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.66	chr7	-	5378	7	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-3635	-300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	349.943328745289	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCTAAAATGTTGTGA	NA	False	NA	-12	True	AGTAAA	-15	NA	37672688	37660366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664651_37665005_37666745_37666915_37668804_37668863_37669030
ES.30657.67	chr7	-	2237	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	42	1162	22	147	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTGCTTTTACATTTT	NA	False	NA	NA	False	AATAGA	-13	NA	37718925	37660578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.68	chr7	-	2080	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-10	1371	-10	1	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGCTTCGTTAATTCT	NA	False	NA	-4	True	AGTAAA	-21	NA	37718977	37660787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.69	chr7	-	1733	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	295.041281899146	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTCTGCTGGCTTCGTT	NA	False	NA	-10	True	AGTAAA	-15	NA	37718987	37660793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718850
ES.30657.70	chr7	-	2036	10	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	-4	-6	intron_retention	FALSE	canonical	0	0	junction_8	361.154151281214	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTCTGCTGGCTTCGT	NA	False	NA	-11	True	AGTAAA	-14	NA	37718971	37660794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682290_37682374_37718534
ES.30657.72	chr7	-	1921	10	ISM	ENSMUSG00000030421.10	ENSMUST00000206327.2	2453	12	21	1641	-3	-919	intron_retention	FALSE	canonical	3	853	junction_4	45.5631429995781	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCATTTAGTCTCATTT	NA	False	NA	NA	False	TATAAA	-28	NA	37718970	37661707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30657.8	chr7	-	5886	7	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	46717	0	-3197	0	3prime_fragment	FALSE	canonical	3	853	junction_5	54.3581231791124	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37672250	37659416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030
ES.30657.9	chr7	-	3631	12	NNC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	354.360954325407	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718966	37659416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37665112_37665304_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ES.30658.1	chr7	-	1916	4	NNC	ENSMUSG00000108726.2	novel	600	4	NA	NA	639	11709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAACATCTAA	9843	False	NA	NA	False	NA	NA	NA	37760486	37737862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37739402_37753224_37753378_37753818_37753935_37760378
ES.30659.1	chr7	-	2118	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	-113	-5	-113	5	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTAACTCTGTCTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	37807072	37797403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.11	chr7	-	2808	10	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	14	-2	intron_retention	FALSE	canonical	3	725	junction_7	61.602669494827	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806913	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.12	chr7	-	1842	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	-1987	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	251.789233649531	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37808946	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37808889
ES.30659.13	chr7	-	1872	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	2	124	junction_8	222.463053112197	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806902	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37806020_37806109_37806211_37806255_37806746
ES.30659.15	chr7	-	1962	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	248.989760485138	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806897	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806185_37806255_37806746
ES.30659.17	chr7	-	2083	11	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	26	-2	intron_retention	FALSE	canonical	1	3	junction_4	257.42161913872	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806901	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799267_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.19	chr7	-	1970	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	248.989760485138	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCTGTTCTTAACTC	NA	False	NA	-15	True	AATAAA	-16	NA	37806900	37797411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806179_37806255_37806746
ES.30659.21	chr7	-	1999	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	246.29378412614	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGCTGTTCTTAACT	NA	False	NA	-16	True	AATAAA	-15	NA	37806964	37797412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799022_37799209_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.22	chr7	-	1798	13	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_1	234.279554639798	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGCTGTTCTTAACT	NA	False	NA	-16	True	AATAAA	-15	NA	37806882	37797412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37797747_37797867_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.25	chr7	-	7943	4	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	648	-4	intron_retention	FALSE	canonical	3	765	junction_2	43.1508980207828	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGCTGTTCTTAACT	NA	False	NA	-16	True	AATAAA	-15	NA	37805685	37797412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37798575_37798671_37798784_37798892_37802347_37802470
ES.30659.26	chr7	-	2091	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_11	244.399212778216	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGCTGTTCTTAACT	NA	False	NA	-16	True	AATAAA	-15	NA	37806926	37797412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806618
ES.30659.4	chr7	-	2276	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	44	-2	intron_retention	FALSE	canonical	2	563	junction_3	100.866495924068	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806883	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ES.30659.6	chr7	-	5063	11	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	11	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	256.825796990879	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	False	NA	-14	True	AATAAA	-17	NA	37806948	37797410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37805768_37806023_37806109_37806211_37806255_37806746
ES.3066.1	chr10	+	176	1	Intergenic	novelGene_2392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAGAAACAAAA	8630	False	NA	NA	False	NA	NA	NA	70529113	70529289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_70529100_70529300
ES.30660.1	chr7	-	175	1	Intergenic	novelGene_25254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAGTTCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	37834815	37834640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_37834600_37834800
ES.30661.1	chr7	+	189	1	Intergenic	novelGene_25255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATAACCAATTACGA	NA	False	NA	NA	False	NA	NA	NA	37869506	37869695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37869500_37869700
ES.30662.1	chr7	+	3404	3	NNC	ENSMUSG00000054676.18	novel	3340	3	NA	NA	-446	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCACTCTCTGTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	37882195	37896987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_37882570_37888030_37888202_37894128
ES.30662.2	chr7	+	2430	3	NNC	ENSMUSG00000054676.18	novel	3340	3	NA	NA	-444	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTCATATCTTTCTG	NA	False	NA	8	True	TTTAAA	-4	NA	37882197	37896015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_37882570_37888030_37888202_37894128
ES.30662.3	chr7	+	3143	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	139	0	-56	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTCTGTGTATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	37883216	37896992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_37883325_37888030_37888202_37894128
ES.30662.4	chr7	+	654	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	153	2475	-42	121	multi-exon	FALSE	canonical	3	43	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCTAGTGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	37883230	37894517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_37883325_37888030_37888202_37894128
ES.30662.5	chr7	+	2146	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	159	977	-36	-1	multi-exon	FALSE	canonical	3	43	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTCATATCTTTCTG	NA	False	NA	8	True	TTTAAA	-4	NA	37883236	37896015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_37883325_37888030_37888202_37894128
ES.30662.6	chr7	+	1169	4	NNC	ENSMUSG00000054676.18	novel	3282	3	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.6846079563875	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTCATATCTTTCTG	NA	False	NA	8	True	TTTAAA	-4	NA	37883245	37896015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_37883319_37888030_37888202_37894128_37895000_37895961
ES.30662.7	chr7	+	4995	3	NNC	ENSMUSG00000054676.18	novel	403	2	NA	NA	-23	-1231	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	21.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAGAGAAAGTAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	37883249	37893165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_37883325_37888030_37890272_37890486
ES.30662.8	chr7	+	3964	3	NNC	ENSMUSG00000054676.18	novel	3340	3	NA	NA	382	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTTCATATCTTTCT	NA	False	NA	7	True	TTTAAA	-3	NA	37886077	37896014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_37887027_37887072_37888202_37894128
ES.30663.1	chr7	-	3349	1	Antisense	novelGene_ENSMUSG00000054676.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGCAACTGGAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37895225	37891876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_37891900_37895200
ES.30664.1	chr7	-	4596	2	NNC	ENSMUSG00000074170.6	novel	5263	2	NA	NA	10475	4096	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	7376	False	NA	NA	False	NA	NA	NA	37916965	37912299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37916141_37916210
ES.30664.2	chr7	-	3463	2	NNC	ENSMUSG00000074170.6	novel	5263	2	NA	NA	7789	277	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTAGGGGTGGGTG	4690	False	NA	NA	False	NA	NA	NA	37919651	37916118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37916142_37916211
ES.30664.3	chr7	-	5249	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	22	-8	22	8	multi-exon	FALSE	canonical	3	140	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACTGAAAGTCGCTAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	37927418	37916387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37921583_37927364
ES.30664.4	chr7	-	4904	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	54	305	54	-305	multi-exon	FALSE	canonical	3	140	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTGACTCCCAAGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	37927386	37916700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37921583_37927364
ES.30664.5	chr7	-	1555	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	8	3700	8	-3700	multi-exon	FALSE	canonical	3	140	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGATTGTTAAGAGTA	NA	False	NA	-19	True	NA	NA	NA	37927432	37920095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37921583_37927364
ES.30664.6	chr7	-	1788	2	NNC	ENSMUSG00000074170.6	novel	5263	2	NA	NA	5201	-3703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTTGATTGTTAAGA	2102	False	NA	-22	True	NA	NA	NA	37922239	37920098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37921583_37921935
ES.30664.7	chr7	-	1537	3	NNC	ENSMUSG00000074170.6	novel	5263	2	NA	NA	36	-3724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAAGAATAAAGTAC	NA	False	NA	-43	True	NA	NA	NA	37927404	37920119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37921583_37924366_37924401_37927364
ES.30665.1	chr7	+	112	1	Intergenic	novelGene_25256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	37936406	37936518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37936400_37936500
ES.30666.1	chr7	+	201	1	Intergenic	novelGene_25257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCATATTTTTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	37954199	37954400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_37954200_37954400
ES.30667.1	chr7	-	1256	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	35	822	-15	-822	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCTTCAAATTCCTGT	NA	False	NA	-7	True	AATAAA	-17	NA	37970812	37962241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
ES.30667.2	chr7	-	1179	6	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-824	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	108.909870994323	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGGCTTCAAATTCCT	NA	False	NA	-9	True	AATAAA	-15	NA	37970799	37962243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37962734_37963751_37963854_37965550_37965629_37966792_37967020_37968325_37968379_37970570
ES.30667.3	chr7	-	3540	5	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-1	-824	intron_retention	FALSE	canonical	3	243	junction_1	19.266226926931	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGGCTTCAAATTCCT	NA	False	NA	-9	True	AATAAA	-15	NA	37970774	37962243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37963854_37965323_37965386_37965550_37965629_37966792_37968379_37970570
ES.30667.4	chr7	-	2399	5	NNC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-1	-826	intron_retention	FALSE	non_canonical	0	0	junction_2	113.721974569562	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGGCTTCAAATTC	NA	False	NA	-11	True	AATAAA	-13	NA	37970774	37962245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37963854_37965323_37965631_37966792_37967020_37968325_37968379_37970570
ES.30667.5	chr7	-	1276	7	NNC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	1	-828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.8241533227462	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970772	37962247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965695_37966792_37967020_37968325_37968379_37970570
ES.30667.6	chr7	-	1287	8	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-1	-828	combination_of_known_junctions	FALSE	canonical	2	9	junction_5	113.432709532289	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970794	37962247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968028_37968084_37968325_37968379_37970570
ES.30667.7	chr7	-	3885	4	FSM	ENSMUSG00000030423.8	ENSMUST00000205959.2	816	4	-21	-3048	-1	-828	multi-exon	FALSE	canonical	3	254	junction_2	16.0485374896143	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970794	37962247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_37965629_37966792_37967020_37968325_37968379_37970570
ES.30667.8	chr7	-	5031	4	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	-2	-828	intron_retention	FALSE	canonical	3	259	junction_1	13.735598518691	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970799	37962247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37965386_37965550_37965629_37966792_37968379_37970570
ES.30667.9	chr7	-	2439	6	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	1	-828	intron_retention	TRUE	canonical	3	24	junction_4	98.7793500687264	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970772	37962247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_37962734_37963751_37963854_37965323_37965629_37966792_37968084_37968325_37968379_37970570
ES.30668.1	chr7	+	2667	1	NIC	ENSMUSG00000108749.2	novel	469	5	NA	NA	2551	-56901	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTTATATTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	37973386	37976053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_37973400_37976100
ES.30669.1	chr7	+	6813	6	Fusion	ENSMUSG00000100169.2_ENSMUSG00000101855.2	novel	645	4	NA	NA	5	18243	multi-exon	FALSE	canonical	0	0	junction_1	0.8	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCATTGCCTGGGTCATA	NA	False	NA	NA	False	NA	NA	NA	38199860	38578199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_38199945_38496252_38496453_38526184_38526332_38533480_38533690_38559138_38559264_38572151
ES.3067.1	chr10	+	156	1	Intergenic	novelGene_2393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	70548810	70548966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_70548800_70549000
ES.30670.1	chr7	+	307	1	Intergenic	novelGene_25258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAACACTTAGACAA	NA	False	NA	NA	False	NA	NA	NA	39090091	39090398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_39090100_39090400
ES.30671.1	chr7	+	2555	5	ISM	ENSMUSG00000030424.16	ENSMUST00000186855.6	2480	6	2	2461	2	180	5prime_fragment	FALSE	canonical	0	0	junction_3	3.83242742918897	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGCTGCTGATTCAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	39098943	39124376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_39099078_39109239_39109367_39116765_39116859_39120820_39120931_39122285
ES.30671.2	chr7	+	3103	1	NIC	ENSMUSG00000030424.16	novel	2480	6	NA	NA	14360	-135	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTGTTTGGATTG	NA	False	NA	NA	False	NA	NA	NA	39123599	39126702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_39123600_39126700
ES.30672.1	chr7	+	2073	5	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2075	89	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	2.44948974278318	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTGAGGCAGGTGTTA	NA	False	NA	NA	False	AATAAA	-14	NA	39136786	39148314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136985_39138848_39138976_39143154_39143248_39145691_39145802_39146769
ES.30672.2	chr7	+	3394	6	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2075	1500	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	6.01331855134916	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTACTTTCATTA	NA	False	NA	5	True	ATTAAA	-17	NA	39136786	39149725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136816_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
ES.30672.3	chr7	+	3553	6	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2065	1500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.58483105326173	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTACTTTCATTA	NA	False	NA	5	True	ATTAAA	-17	NA	39136796	39149725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136985_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
ES.30672.4	chr7	+	3455	5	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2046	1500	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	2.44948974278318	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTACTTTCATTA	NA	False	NA	5	True	ATTAAA	-17	NA	39136815	39149725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136985_39138848_39138976_39143154_39143248_39145691_39145802_39146769
ES.30672.5	chr7	+	3711	6	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2019	1704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.58483105326173	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTGTGGTTAAGAGCAG	NA	False	NA	NA	False	AATAAA	-23	NA	39136842	39149929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136985_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
ES.30672.6	chr7	+	4450	7	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-2010	2517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.87184270936277	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCTCAGCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	39136851	39150742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39136985_39138848_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146773_39150525_39150585
ES.30672.8	chr7	+	3570	5	NNC	ENSMUSG00000100490.2	novel	1290	3	NA	NA	-15	1703	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.60965203320114	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTGTGGTTAAGAGCA	NA	False	NA	NA	False	AATAAA	-22	NA	39138846	39149928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39138976_39139461_39139541_39143154_39143248_39145691_39145802_39146769
ES.30673.1	chr7	+	5994	4	FSM	ENSMUSG00000068959.7	ENSMUST00000108015.4	5969	4	-28	3	-28	-3	multi-exon	FALSE	canonical	2	4	junction_3	2.94392028877595	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTTTTAAGTAGATT	NA	False	NA	NA	False	NA	NA	NA	39167161	39189841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39167289_39183216_39183344_39183538_39183600_39184162
ES.30673.2	chr7	+	5383	5	NNC	ENSMUSG00000068959.7	novel	5969	4	NA	NA	-27	-225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.96074487943871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGGTCCTATCTGTAT	NA	False	NA	NA	False	NA	NA	NA	39167162	39189619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39167289_39183216_39183344_39183538_39183600_39184162_39187838_39188225
ES.30673.3	chr7	+	4749	5	NNC	ENSMUSG00000068959.7	novel	5969	4	NA	NA	-27	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.96074487943871	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTGTGTATAATTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	39167162	39188985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39167289_39183216_39183344_39183538_39183600_39184162_39187838_39188225
ES.30673.4	chr7	+	6154	4	NNC	ENSMUSG00000068959.7	novel	5969	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.08248290463863	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAAGTAGATTTCT	NA	False	NA	NA	False	NA	NA	NA	39167163	39189844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39167289_39183216_39183344_39183538_39183600_39184003
ES.30673.5	chr7	+	5747	4	FSM	ENSMUSG00000068959.7	ENSMUST00000108015.4	5969	4	-4	226	-4	-226	multi-exon	FALSE	canonical	2	4	junction_3	2.94392028877595	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGGTCCTATCTGTA	NA	False	NA	NA	False	NA	NA	NA	39167185	39189618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39167289_39183216_39183344_39183538_39183600_39184162
ES.30673.6	chr7	+	5234	2	NNC	ENSMUSG00000068959.7	novel	5969	4	NA	NA	17025	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCAAATTGTTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	39184214	39189836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39187838_39188225
ES.30674.1	chr7	-	489	1	Intergenic	novelGene_25259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	39176852	39176363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_39176400_39176900
ES.30674.2	chr7	-	178	1	Intergenic	novelGene_25260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACACTCCTG	NA	False	NA	NA	False	NA	NA	NA	39176856	39176678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_39176700_39176900
ES.30675.1	chr7	-	163	1	Intergenic	novelGene_25261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATATATGTATGT	NA	False	NA	NA	False	NA	NA	NA	39178464	39178301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_39178300_39178500
ES.30676.1	chr7	+	5244	7	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	28	4556	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.5342906696074	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGGTTCTGTTTTCT	NA	False	NA	20	True	AATAAA	-23	NA	39193853	39219190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39193929_39194422_39194505_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.10	chr7	+	3823	1	Genic_Genomic	ENSMUSG00000108621.2	novel	NA	NA	NA	NA	-21	2551	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAAAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	39201902	39205725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_39201900_39205700
ES.30676.11	chr7	+	5219	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-22	10824	-21	4555	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39201902	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.13	chr7	+	5224	6	NNC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	-19	4555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.0090890315797	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39201904	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202036_39202651_39202757_39213125_39213253_39213418_39213487_39214290_39214506_39214611
ES.30676.14	chr7	+	5103	5	NIC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	-11	4554	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.4987244565916	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGAGGTTCTGTTTT	NA	False	NA	18	True	AATAAA	-21	NA	39201912	39219188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_39202036_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.15	chr7	+	5072	7	NNC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	6	53470	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.6999743983464	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTTATAGGCAGCGTG	NA	False	NA	NA	False	ACTAAA	-25	NA	39201930	39283483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611_39219041_39283453
ES.30676.16	chr7	+	5106	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	280	4554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4979999111032	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGAGGTTCTGTTTT	NA	False	NA	18	True	AATAAA	-21	NA	39202228	39219188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202250_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.17	chr7	+	4041	5	ISM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	310	12286	286	3093	3prime_fragment	FALSE	canonical	3	54	junction_4	2.34520787991171	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCCATTTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	39202234	39217727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.18	chr7	+	5115	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	290	4555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.4979999111032	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39202238	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202268_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.19	chr7	+	5162	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	305	4555	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	20.9055016682212	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39202253	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202330_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.2	chr7	+	5137	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	29	4555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.9562608683029	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39193854	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39193929_39194422_39194505_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.20	chr7	+	4493	4	ISM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	10225	12288	10201	3091	3prime_fragment	FALSE	canonical	3	54	junction_3	2.62466929133727	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTGCCATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	39212149	39217725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.21	chr7	+	5687	1	NIC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	11408	4409	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTTAAAATAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	39213356	39219043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_39213400_39219000
ES.30676.22	chr7	+	5825	1	ISM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	15538	6726	15514	-6726	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCAGTGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	39217462	39223287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_39217500_39223300
ES.30676.23	chr7	+	3942	2	NNC	ENSMUSG00000074903.6	novel	560	2	NA	NA	-411	2978	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGTGTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	39237943	39242119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39238783_39239016
ES.30676.24	chr7	+	210	1	Intergenic	novelGene_25263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGAGTTGAAAATCTC	NA	False	NA	NA	False	NA	NA	NA	39248909	39249119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_39248900_39249100
ES.30676.3	chr7	+	5048	5	NIC	ENSMUSG00000108621.2	novel	208	2	NA	NA	33	4552	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.0676130931175	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACCTGGAGGTTCTGTT	NA	False	NA	16	True	AATAAA	-19	NA	39193858	39219186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_39193929_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.4	chr7	+	5125	6	NIC	ENSMUSG00000108621.2	novel	208	2	NA	NA	64	4555	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.4979999111032	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGAGGTTCTGTTTTC	NA	False	NA	19	True	AATAAA	-22	NA	39193889	39219189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_39193929_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.5	chr7	+	4974	7	NNC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	-43	4552	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	21.6999743983464	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACCTGGAGGTTCTGTT	NA	False	NA	16	True	AATAAA	-19	NA	39201880	39219186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611_39215549_39215812
ES.30676.6	chr7	+	3765	6	NNC	ENSMUSG00000108621.2	novel	16021	6	NA	NA	-25	3093	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	21.303520835768	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGCCATTTCTTTCAG	NA	False	NA	NA	False	NA	NA	NA	39201898	39217727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_39202036_39202647_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.7	chr7	+	5075	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-24	10970	-23	4409	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTTAAAATAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	39201900	39219043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30676.8	chr7	+	774	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-23	15270	-22	109	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCCAGTAAAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	39201901	39214743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ES.30677.1	chr7	-	193	1	Intergenic	novelGene_25262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	39196157	39195964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_39196000_39196200
ES.30678.1	chr7	-	183	1	Intergenic	novelGene_25264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAGAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	39385431	39385248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_39385200_39385400
ES.30679.1	chr7	+	176	1	Intergenic	novelGene_25265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	39614259	39614435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_39614300_39614400
ES.3068.1	chr10	-	172	1	Intergenic	novelGene_2394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGACAACAAC	4461	False	NA	NA	False	NA	NA	NA	70594857	70594685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70594700_70594900
ES.30680.1	chr7	+	427	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	-24	-8	-24	8	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGACTAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	39840336	39840763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_39840300_39840800
ES.30681.1	chr7	-	658	5	Fusion	ENSMUSG00000100732.2_ENSMUSG00000108490.2	novel	726	4	NA	NA	-28552	275	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCCATGAGTGAATCT	NA	False	NA	NA	False	AGTAAA	-20	NA	40767819	40697807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_40697841_40698055_40698181_40733248_40733458_40762991_40763197_40767733
ES.30682.1	chr7	+	2437	2	FSM	ENSMUSG00000091864.2	ENSMUST00000170929.2	906	2	223	-1754	223	1754	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATCTGTTACATAAAGG	NA	False	NA	NA	False	AATAAA	-24	NA	41043344	41048625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41043445_41046288
ES.30683.1	chr7	+	3719	1	FSM	ENSMUSG00000083500.2	ENSMUST00000119135.2	1371	1	-174	-2174	-174	2174	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTACTAAAGCTCAAA	NA	False	NA	NA	False	NA	NA	NA	41139600	41143319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41139600_41143300
ES.30684.1	chr7	+	2321	1	Intergenic	novelGene_25266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTAATGCACCTCCCT	NA	False	NA	NA	False	NA	NA	NA	41144059	41146380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41144100_41146400
ES.30685.1	chr7	-	2702	3	Fusion	ENSMUSG00000056383.11_ENSMUSG00000074166.8	novel	2671	4	NA	NA	-8	0	intron_retention	FALSE	canonical	1	2	junction_1	10.5	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41148840	41022346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_41024799_41026169_41026297_41148717
ES.30685.10	chr7	-	2838	5	Fusion	ENSMUSG00000056383.11_ENSMUSG00000074166.8	novel	2071	5	NA	NA	-5	-9	intron_retention	TRUE	non_canonical	0	0	junction_4	26.0516314268416	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATAAATTTCCTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	41148837	41022355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_41024799_41026169_41026297_41037531_41037680_41042650_41042749_41148815
ES.30685.11	chr7	-	3468	1	FSM	ENSMUSG00000056383.11	ENSMUST00000206430.2	1139	1	-80	-2249	5	2249	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	41042798	41039330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41039300_41042800
ES.30685.12	chr7	-	3689	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	463	-741	0	741	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTTCATGAGTCATTG	NA	False	NA	NA	False	AATAAA	-17	NA	41148851	41127556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.13	chr7	-	3498	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	464	-551	1	551	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCTGAGCTCTGATTT	NA	False	NA	NA	False	NA	NA	NA	41148850	41127746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.14	chr7	-	3531	5	NNC	ENSMUSG00000074166.8	novel	3411	4	NA	NA	53	546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.4205778566621	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCACTTTCTGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	41148779	41127751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41130924_41131989_41132051_41132256_41132384_41140383_41140493_41148717
ES.30685.16	chr7	-	4018	5	NNC	ENSMUSG00000074166.8	novel	3411	4	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	20.1416856295594	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTTTTTCTGTCTTT	NA	False	NA	3	True	AATAAA	-24	NA	41148840	41128294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41130924_41131989_41132051_41132256_41132384_41139414_41140493_41148717
ES.30685.17	chr7	-	2962	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	452	-3	-11	3	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTTTTTCTGTCTTT	NA	False	NA	3	True	AATAAA	-24	NA	41148862	41128294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.18	chr7	-	1581	5	NNC	ENSMUSG00000074166.8	novel	3411	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2294017814916	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTTTTTCTGTC	NA	False	NA	0	True	AATAAA	-21	NA	41148836	41128297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41129450_41130801_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.2	chr7	-	2928	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	10	-867	10	0	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042793	41022346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ES.30685.20	chr7	-	1534	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	483	1394	1	1164	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTGTAATCTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	41148831	41129691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.21	chr7	-	381	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	474	2556	-8	2	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATCCTCAAAGACATCA	NA	False	NA	NA	False	NA	NA	NA	41148840	41130853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ES.30685.22	chr7	-	3130	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	3	-1796	3	1796	multi-exon	FALSE	canonical	2	6	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAAGCCACATGAT	NA	False	NA	NA	False	NA	NA	NA	41148829	41137474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41140493_41148717
ES.30685.23	chr7	-	4144	1	Genic_Genomic	ENSMUSG00000074166.8	novel	NA	NA	NA	NA	6831	1413	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	41142001	41137857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_41137900_41142000
ES.30685.24	chr7	-	2756	2	FSM	ENSMUSG00000074166.8	ENSMUST00000205995.2	1337	2	-6	-1413	-6	1413	multi-exon	FALSE	canonical	2	6	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	41148838	41137857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41140493_41148717
ES.30685.3	chr7	-	2760	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	-89	0	30	0	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042773	41022346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
ES.30685.5	chr7	-	2904	5	Fusion	ENSMUSG00000056383.11_ENSMUSG00000074166.8	novel	2071	5	NA	NA	-7	-3	intron_retention	FALSE	canonical	0	0	junction_4	34.3329288002058	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	-17	True	AATAAA	-22	NA	41148839	41022349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41148717
ES.30685.6	chr7	-	2631	3	NIC	ENSMUSG00000056383.11	novel	2671	4	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_2	43	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTTTTTTCTGACT	NA	False	NA	-17	True	AATAAA	-22	NA	41042774	41022349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_41024799_41025914_41025973_41042650
ES.30685.8	chr7	-	4028	4	NIC	ENSMUSG00000056383.11	novel	2071	5	NA	NA	22	-4	intron_retention	FALSE	canonical	3	47	junction_3	14.613540144522	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTCCTTTTTTCTGAC	NA	False	NA	-18	True	AATAAA	-21	NA	41042781	41022350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_41025973_41026169_41026297_41037531_41037680_41042650
ES.30685.9	chr7	-	2750	4	Fusion	ENSMUSG00000056383.11_ENSMUSG00000074166.8	novel	2671	4	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	23	junction_3	28.8020061029706	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATAAATTTCCTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	41148839	41022355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_41024799_41025914_41025973_41026169_41026297_41148717
ES.30686.1	chr7	+	219	1	Intergenic	novelGene_25267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTTATTTTATGGGT	NA	False	NA	NA	False	TTTAAA	-13	NA	41150701	41150920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41150700_41150900
ES.30686.2	chr7	+	177	2	Antisense	novelGene_ENSMUSG00000090744.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGATTTCCA	NA	False	NA	NA	False	NA	NA	NA	41150702	41209488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_41150849_41209457
ES.30686.3	chr7	+	176	2	Intergenic	novelGene_25268	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	27	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41150703	41174120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41150753_41173993
ES.30686.4	chr7	+	171	1	Intergenic	novelGene_25269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACATTAAAACATT	NA	False	NA	NA	False	NA	NA	NA	41159614	41159785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41159600_41159800
ES.30686.5	chr7	+	1424	1	Intergenic	novelGene_25270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41185612	41187036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41185600_41187000
ES.30686.6	chr7	+	7256	1	Antisense	novelGene_ENSMUSG00000090744.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAAAACCAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	41194470	41201726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_41194500_41201700
ES.30686.7	chr7	+	4637	1	Intergenic	novelGene_25271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTCTTTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	41202258	41206895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41202300_41206900
ES.30687.1	chr7	-	2492	9	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-6	28816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.354575624389	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGGATTTAGAATTAG	NA	False	NA	NA	False	ATTAAA	-18	NA	41210259	41166281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41166852_41170839_41170997_41172737_41172796_41173069_41173140_41186755_41186861_41195001_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.10	chr7	-	2850	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-27	-1393	-27	1393	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTTTCTTTTTTTTTTA	NA	False	NA	-2	True	NA	NA	NA	41210280	41193704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.11	chr7	-	2843	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-6	1393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.605404730309	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTTTCTTTTTTTTTTA	NA	False	NA	-2	True	NA	NA	NA	41210259	41193704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197549_41210137
ES.30687.12	chr7	-	4233	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-12	1391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	116.548273260482	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTCGTTTCTTTTTTTTT	NA	False	NA	-4	True	NA	NA	NA	41210265	41193706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197535_41198502_41199903_41210137
ES.30687.13	chr7	-	969	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-7	1390	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.4131733737667	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGTCGTTTCTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	41210260	41193707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41193753_41195610_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.14	chr7	-	1281	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-17	1390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.4131733737667	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGTCGTTTCTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	41210236	41193707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41193821_41195342_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.15	chr7	-	3727	3	NIC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	9	1390	intron_retention	FALSE	canonical	3	131	junction_2	54	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGTCGTTTCTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	41210244	41193707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_41197201_41197407_41197535_41210137
ES.30687.16	chr7	-	5926	3	ISM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	9497	-1390	9463	1390	3prime_fragment	FALSE	canonical	3	230	junction_1	4.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGTCGTTTCTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	41200756	41193707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_41196224_41197139_41197201_41197407
ES.30687.17	chr7	-	2999	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-5	1390	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	110.1342614973	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGTCGTTTCTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	41210224	41193707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197743_41210137
ES.30687.18	chr7	-	2094	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	6	1388	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.4131733737667	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGTCGTTTCTTTTTT	NA	False	NA	-7	True	NA	NA	NA	41210247	41193709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41193753_41194470_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.2	chr7	-	5839	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-23	-4386	-23	4386	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCTGTACTTTGACT	NA	False	NA	NA	False	AATATA	-14	NA	41210276	41190711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.20	chr7	-	2889	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	3	1388	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	116.793353834882	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGTCGTTTCTTTTTT	NA	False	NA	-7	True	NA	NA	NA	41210250	41193709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197535_41200623_41200698_41210137
ES.30687.21	chr7	-	2043	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-27	1388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.4131733737667	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGTCGTTTCTTTTTT	NA	False	NA	-7	True	NA	NA	NA	41210280	41193709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41194592_41195393_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.22	chr7	-	2890	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-8	1388	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	116.548273260482	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGTCGTTTCTTTTTT	NA	False	NA	-7	True	NA	NA	NA	41210227	41193709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197535_41198502_41198601_41210137
ES.30687.23	chr7	-	2652	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-4	1388	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.4131733737667	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGTCGTTTCTTTTTT	NA	False	NA	-7	True	NA	NA	NA	41210257	41193709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41195695_41195864_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.3	chr7	-	3473	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-5	4382	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.4131733737667	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATCTGGCTGTACTTT	NA	False	NA	NA	False	AATATA	-10	NA	41210224	41190715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41193444_41195753_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.4	chr7	-	4828	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-19	4382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.4131733737667	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATCTGGCTGTACTTT	NA	False	NA	NA	False	AATATA	-10	NA	41210272	41190715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41193457_41194459_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.5	chr7	-	4740	2	NNC	ENSMUSG00000090744.8	novel	531	3	NA	NA	14367	4382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATCTGGCTGTACTTT	NA	False	NA	NA	False	AATATA	-10	NA	41195852	41190715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41194101_41194497
ES.30687.6	chr7	-	4985	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	0	-3555	0	3555	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTTCCATGCCTC	NA	False	NA	NA	False	TATAAA	-12	NA	41210253	41191542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.7	chr7	-	4551	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	-13	-3108	-13	3108	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTCATTGTCTATTTAA	NA	False	NA	-1	True	AATATA	-16	NA	41210266	41191989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.8	chr7	-	3964	5	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	-32	3106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.4131733737667	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTCATTGTCTATTT	NA	False	NA	-3	True	AATATA	-14	NA	41210285	41191991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41192655_41193258_41196224_41197139_41197201_41197407_41197535_41210137
ES.30687.9	chr7	-	4576	4	NNC	ENSMUSG00000090744.8	novel	1430	4	NA	NA	6	3105	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	109.191981797607	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTCATTGTCTATT	NA	False	NA	-4	True	AATATA	-13	NA	41210247	41191992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_41196224_41197139_41197201_41197407_41197582_41210137
ES.30688.1	chr7	+	177	1	Intergenic	novelGene_25272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	41213254	41213431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41213300_41213400
ES.30689.1	chr7	+	4473	11	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	-8821	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.3055553953145	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	44	True	AATAAA	-26	NA	41239832	41277956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41239983_41242669_41242716_41244582_41244672_41251171_41251240_41252263_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.10	chr7	+	4232	8	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	94.4327857283061	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248673	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41252301_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.11	chr7	+	3985	6	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_2	54.3080104588632	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248673	41277957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41261099_41261320_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.12	chr7	+	6349	8	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-10	2168	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	94.4373239946225	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTTTCTTGTTT	NA	False	NA	NA	False	AAAAAG	-25	NA	41248674	41280125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41251171_41251240_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.13	chr7	+	6279	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-10	2166	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGTTTTGTTTCTTGT	NA	False	NA	NA	False	AAAAAG	-23	NA	41248674	41280123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.14	chr7	+	4112	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	44	True	AATAAA	-26	NA	41248674	41277956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.15	chr7	+	6535	10	Fusion	ENSMUSG00000091474.3_ENSMUSG00000074165.11	novel	4004	6	NA	NA	-5	2	multi-exon	FALSE	canonical	1	1	junction_7	84.6781852765421	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41248679	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41277501_41296906_41297042_41297242_41297304_41297616
ES.30689.16	chr7	+	6369	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-5	-2360	-5	2360	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGGCTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	41248679	41280317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.17	chr7	+	3868	5	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-3	-43	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	89.7813315784523	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACTAGTAAATAAATTA	NA	False	NA	2	True	ATTAAA	-16	NA	41248681	41277914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41261099_41261350_41261794_41261922_41274146_41274257_41274676
ES.30689.18	chr7	+	3549	5	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-2	-361	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	89.7813315784523	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATTTTTTGAAAATAG	NA	False	NA	NA	False	NA	NA	NA	41248682	41277596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41261099_41261350_41261794_41261922_41274146_41274257_41274676
ES.30689.19	chr7	+	6334	6	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-2	2358	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_2	54.3080104588632	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGCCTGGCTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	41248682	41280315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41261099_41261320_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.2	chr7	+	4048	7	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	-8811	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.3567323472462	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41239842	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41239983_41242669_41242716_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.20	chr7	+	3649	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-2	357	-2	-357	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTGAAAATAGGTTA	NA	False	NA	NA	False	NA	NA	NA	41248682	41277600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.21	chr7	+	4449	5	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	1	1	intron_retention	FALSE	canonical	3	115	junction_1	51.0514446416553	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGTAATGAATTTCTA	NA	False	NA	46	True	AATAAA	-28	NA	41248685	41277958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41261099_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.22	chr7	+	4275	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	2	-273	2	273	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGCATAAGTGATGTGA	NA	False	NA	NA	False	NA	NA	NA	41248686	41278230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.23	chr7	+	3203	8	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.975414005208	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248687	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41274876_41275770
ES.30689.24	chr7	+	5022	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	7	-1025	7	1025	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCATCAAGGAAACTTCTG	NA	False	NA	NA	False	NA	NA	NA	41248691	41278982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.25	chr7	+	3924	11	Fusion	ENSMUSG00000091474.3_ENSMUSG00000074165.11	novel	4004	6	NA	NA	-11	2	multi-exon	FALSE	canonical	0	0	junction_6	87.3588003580635	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41248697	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41274876_41284103_41284135_41292756_41292857_41296906_41297042_41297242_41297304_41297616
ES.30689.26	chr7	+	4437	10	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.6298780571172	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	44	True	AATAAA	-26	NA	41248698	41277956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41250808_41250970_41251171_41251240_41252301_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.27	chr7	+	6152	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	18	-2166	-6	2166	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGTTTTGTTTCTTGT	NA	False	NA	NA	False	AAAAAG	-23	NA	41248702	41280123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.28	chr7	+	3754	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	18	232	-6	-232	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTAACTAATATTTCT	NA	False	NA	NA	False	CATAAA	-1	NA	41248702	41277725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.29	chr7	+	4049	7	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	77.5843626856168	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTTGGGGTAATGAAT	NA	False	NA	41	True	AATAAA	-23	NA	41248704	41277953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41252859_41252959_41261099_41261320_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.3	chr7	+	4492	6	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	-8811	-3	intron_retention	FALSE	canonical	0	0	junction_2	105.56211441611	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGGGTAATGAATT	NA	False	NA	42	True	AATAAA	-24	NA	41239842	41277954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41239983_41242669_41242716_41261099_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.30	chr7	+	4517	6	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	6	-1	intron_retention	FALSE	canonical	3	39	junction_2	83.9537968170588	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	44	True	AATAAA	-26	NA	41248714	41277956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41252859_41252959_41261099_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.31	chr7	+	8065	6	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	11	-45	intron_retention	FALSE	canonical	3	6	junction_1	96.0012499918621	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATTACTAGTAAATAAAT	NA	False	NA	0	True	ATTAAA	-14	NA	41248719	41277912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41252422_41252859_41252959_41261099_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.32	chr7	+	3743	4	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	103.849249716436	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248720	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41261099_41261350_41274146_41274257_41274676
ES.30689.34	chr7	+	4208	9	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	14	-45	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	96.1626226763809	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATTACTAGTAAATAAAT	NA	False	NA	0	True	ATTAAA	-14	NA	41248722	41277912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41251171_41251240_41252301_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.35	chr7	+	4323	5	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	14	-33	intron_retention	FALSE	canonical	3	112	junction_2	39.0320381225475	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTAGAGCTTGTGT	NA	False	NA	12	True	ATTAAA	-26	NA	41248722	41277924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41261099_41261320_41261794_41261922_41262579_41262676_41274146
ES.30689.36	chr7	+	3701	11	Fusion	ENSMUSG00000091474.3_ENSMUSG00000074165.11	novel	4004	6	NA	NA	17	2	multi-exon	FALSE	canonical	0	0	junction_7	89.255195927184	283	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41248725	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41274876_41292756_41292857_41296914_41297042_41297242_41297304_41297871
ES.30689.37	chr7	+	3824	6	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5453096317969	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGGGTAATGAATT	NA	False	NA	42	True	AATAAA	-24	NA	41248725	41277954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41261235_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.38	chr7	+	6506	11	Fusion	ENSMUSG00000091474.3_ENSMUSG00000074165.11	novel	4004	6	NA	NA	-17	0	multi-exon	FALSE	canonical	2	2	junction_6	87.4339179037517	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTGGTGAAAATTTT	NA	False	NA	0	True	TATAAA	-13	NA	41248730	41300302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41277501_41284103_41284135_41292756_41292857_41296914_41297042_41297242_41297304_41297616
ES.30689.39	chr7	+	4210	8	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	94.9629358416928	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTTGGGGTAATGAAT	NA	False	NA	41	True	AATAAA	-23	NA	41248731	41277953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41252263_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.4	chr7	+	4135	8	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	-8809	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.280979135738	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41239844	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41239983_41242669_41242716_41244582_41244672_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.40	chr7	+	6383	9	Fusion	ENSMUSG00000091474.3_ENSMUSG00000074165.11	novel	4004	6	NA	NA	-15	2	multi-exon	FALSE	canonical	1	1	junction_6	82.9197654362336	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41248732	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676_41277501_41296906_41297042_41297242_41297304_41297616
ES.30689.41	chr7	+	4078	7	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.5841947720866	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248732	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274282_41274676
ES.30689.42	chr7	+	4211	9	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.9442494426565	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248803	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41248825_41250808_41250970_41251171_41251240_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.43	chr7	+	4632	9	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	1739	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	96.4206279797015	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41250486	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41250970_41251171_41251240_41252301_41252422_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.44	chr7	+	4046	5	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-249	271	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_1	52.0930657573539	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGCATAAGTGATGT	NA	False	NA	NA	False	NA	NA	NA	41261158	41278228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41261320_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.45	chr7	+	1232	1	Intergenic	novelGene_25274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAATCACCTCATTAGA	NA	False	NA	NA	False	AAAAAG	-22	NA	41271056	41272288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41271100_41272300
ES.30689.46	chr7	+	4934	1	Genic_Genomic	ENSMUSG00000091474.3	novel	NA	NA	NA	NA	1510	2485	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGATGCTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	41275508	41280442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_41275500_41280400
ES.30689.47	chr7	+	3789	4	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	-60	1	intron_retention	FALSE	canonical	3	14	junction_2	13.2245562832516	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAATATGTTTTCATTT	NA	False	NA	54	True	NA	NA	NA	41282566	41300356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41292756_41292857_41296906_41297304_41297616
ES.30689.48	chr7	+	3176	6	FSM	ENSMUSG00000074165.11	ENSMUST00000100275.10	3177	6	4	-3	4	3	multi-exon	FALSE	canonical	3	5	junction_2	15.7733953225043	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGTGAAAATTTTGGA	NA	False	NA	3	True	TATAAA	-16	NA	41282958	41300305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41283119_41284103_41284135_41292756_41292857_41296906_41297042_41297242_41297304_41297616
ES.30689.49	chr7	+	1813	6	NNC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.7471124411832	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282960	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41283119_41284103_41284135_41296906_41297042_41297242_41297304_41297616_41298504_41299763
ES.30689.5	chr7	+	3995	6	NNC	ENSMUSG00000091474.3	novel	532	2	NA	NA	-8804	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5453096317969	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41239849	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41239983_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.50	chr7	+	555	4	NNC	ENSMUSG00000074165.11	novel	3058	4	NA	NA	10	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.757863302587	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTAGGTCTTATAACG	NA	False	NA	NA	False	AATATA	-16	NA	41282964	41297823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41283119_41296908_41297042_41297242_41297304_41297616
ES.30689.51	chr7	+	5198	5	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	11	-137	intron_retention	FALSE	canonical	3	5	junction_2	16.3095064303001	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTTCAGTCACATATA	NA	False	NA	NA	False	NA	NA	NA	41282965	41298284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41284103_41284135_41292756_41297042_41297242_41297304_41297616
ES.30689.52	chr7	+	811	4	NIC	ENSMUSG00000074165.11	novel	1169	5	NA	NA	12	297	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	18.4028983224563	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGGCTGTGTAGTAA	NA	False	NA	NA	False	NA	NA	NA	41282966	41298079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41296906_41297042_41297242_41297304_41297616
ES.30689.53	chr7	+	1861	6	NNC	ENSMUSG00000074165.11	novel	3775	6	NA	NA	-7	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	17.9220534537759	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282972	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41283119_41292756_41292857_41296914_41297042_41297242_41297304_41297616_41298362_41299622
ES.30689.54	chr7	+	3124	5	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	14.5344418537486	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282978	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41292756_41292857_41296906_41297042_41297242_41297304_41297616
ES.30689.55	chr7	+	3017	4	NIC	ENSMUSG00000074165.11	novel	1169	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	18.4028983224563	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGGTGAAAATTT	NA	False	NA	-1	True	TATAAA	-12	NA	41282982	41300301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41296906_41297042_41297242_41297304_41297616
ES.30689.56	chr7	+	3329	6	NIC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	16.5963851485798	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41282993	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41283119_41284103_41284324_41292756_41292857_41296906_41297042_41297242_41297304_41297616
ES.30689.57	chr7	+	3130	6	FSM	ENSMUSG00000074165.11	ENSMUST00000098508.9	3775	6	-7	652	6	0	multi-exon	FALSE	canonical	3	5	junction_2	16.2677595261302	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTGGTGAAAATTTT	NA	False	NA	0	True	TATAAA	-13	NA	41282993	41300302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41283119_41284103_41284135_41292756_41292857_41296914_41297042_41297242_41297304_41297616
ES.30689.58	chr7	+	2987	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	20	51	7	2	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGGTGAAAATTTTGG	NA	False	NA	2	True	TATAAA	-15	NA	41283007	41300304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
ES.30689.59	chr7	+	4955	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	26	-1923	13	1324	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATCTGTAGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	41283013	41302278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
ES.30689.6	chr7	+	4239	8	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	-38	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	94.4373239946225	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGGTAATGAATTTC	NA	False	NA	44	True	AATAAA	-26	NA	41248615	41277956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41251171_41251240_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.60	chr7	+	3038	5	NNC	ENSMUSG00000074165.11	novel	3177	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.8044938147649	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTGGTGAAAATTTT	NA	False	NA	0	True	TATAAA	-13	NA	41283020	41300302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_41283119_41284103_41284170_41296914_41297042_41297242_41297304_41297616
ES.30689.61	chr7	+	2941	3	FSM	ENSMUSG00000074165.11	ENSMUST00000170770.2	2499	3	-150	-292	-150	10	multi-exon	FALSE	canonical	3	43	junction_2	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTTTGGAGTTTTTT	NA	False	NA	10	True	TATAAA	-23	NA	41296857	41300312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41297042_41297242_41297304_41297616
ES.30689.62	chr7	+	1792	1	ISM	ENSMUSG00000074165.11	ENSMUST00000098508.9	3775	6	16157	5	2150	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAAGTGTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	41299157	41300949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_41299200_41300900
ES.30689.7	chr7	+	4022	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-18	0	13	0	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248666	41277957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.8	chr7	+	3768	5	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	95.6017128507643	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGGGGTAATGAATTT	NA	False	NA	43	True	AATAAA	-25	NA	41248668	41277955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_41248825_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ES.30689.9	chr7	+	4439	5	ISM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	-15	0	-15	0	intron_retention	FALSE	canonical	3	115	junction_1	32.2829289253624	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248669	41277957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146
ES.3069.1	chr10	+	713	4	NNC	ENSMUSG00000112883.2	novel	464	4	NA	NA	-183	96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCTGCCTTTCCTACCC	NA	False	NA	NA	False	AATAAA	-15	NA	70682663	70689652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_70682951_70683247_70683382_70688124_70688253_70689488
ES.3069.2	chr10	+	3780	1	Genic_Genomic	ENSMUSG00000112883.2	novel	NA	NA	NA	NA	-163	-3093	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTTTGTATTTAAGG	NA	False	NA	NA	False	NA	NA	NA	70682683	70686463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_70682700_70686500
ES.3069.3	chr10	+	1974	5	Fusion	ENSMUSG00000047692.7_ENSMUSG00000112883.2	novel	464	4	NA	NA	-155	772	intron_retention	FALSE	canonical	0	0	junction_2	1.22474487139159	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGGAGTGATTTTTT	NA	False	NA	NA	False	AAAACA	-43	NA	70682691	70770926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_70682951_70759125_70759363_70759866_70759992_70760941_70761054_70769685
ES.3069.4	chr10	+	1739	3	NNC	ENSMUSG00000112883.2	novel	464	4	NA	NA	-107	58603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATTCCTAGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	70682739	70748159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_70682951_70746358_70746598_70746870
ES.3069.5	chr10	+	1689	1	Genic_Genomic	ENSMUSG00000047692.7	novel	NA	NA	NA	NA	721	347	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAATCAAACTCTTCA	NA	False	NA	NA	False	AAGAAA	-16	NA	70705219	70706908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_70705200_70706900
ES.30690.1	chr7	-	172	1	Intergenic	novelGene_25273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	41251703	41251531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_41251500_41251700
ES.30691.1	chr7	-	3471	1	Antisense	novelGene_ENSMUSG00000074165.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGAGTCTCATTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	41285539	41282068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_41282100_41285500
ES.30692.1	chr7	+	240	1	Intergenic	novelGene_25275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	41597665	41597905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41597700_41597900
ES.30693.1	chr7	+	229	1	Intergenic	novelGene_25276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGAATTGTGAGAAATAA	NA	False	NA	NA	False	AAAAAG	-24	NA	41702241	41702470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_41702200_41702500
ES.30694.1	chr7	+	3573	2	Antisense	novelGene_ENSMUSG00000092416.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGAACTCTATTTTC	NA	False	NA	NA	False	NA	NA	NA	42123870	42127864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42126104_42126524
ES.30695.1	chr7	+	177	1	Intergenic	novelGene_25277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGGAGCGAGAGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	42128648	42128825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42128600_42128800
ES.30696.1	chr7	+	322	1	Intergenic	novelGene_25280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATCTCAAT	NA	False	NA	NA	False	NA	NA	NA	42133498	42133820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42133500_42133800
ES.30697.1	chr7	+	155	1	Intergenic	novelGene_25281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42137649	42137804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42137600_42137800
ES.30698.1	chr7	+	173	1	Intergenic	novelGene_25283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	42141159	42141332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42141200_42141300
ES.30699.1	chr7	+	220	1	Intergenic	novelGene_25284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTGTCATCTGC	NA	False	NA	NA	False	NA	NA	NA	42142868	42143088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42142900_42143100
ES.307.1	chr1	-	170	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCAGGTGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	37158165	37157995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_37158000_37158200
ES.3070.1	chr10	+	177	1	Intergenic	novelGene_2397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGGAATGCC	NA	False	NA	NA	False	NA	NA	NA	70881899	70882076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_70881900_70882100
ES.30700.1	chr7	-	4043	9	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-3	84690	intron_retention	FALSE	non_canonical	0	0	junction_1	138.047093413806	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTTTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155153	42038119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42038381_42048308_42048406_42048513_42048565_42123694_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
ES.30700.10	chr7	-	3478	9	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-14	74726	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.047093413806	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACGGTCTCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	42155178	42048083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139541_42139701_42150781_42150850_42155033
ES.30700.12	chr7	-	3996	8	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	9	74726	intron_retention	FALSE	non_canonical	0	0	junction_1	130.189814329317	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACGGTCTCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	42155140	42048083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
ES.30700.14	chr7	-	4835	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	14	-780	13	780	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGAACATTATCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	42155136	42122029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ES.30700.15	chr7	-	4810	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-19	776	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCTCTTGGAACATTAT	NA	False	NA	NA	False	AATAAA	-12	NA	42155183	42122033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
ES.30700.16	chr7	-	4066	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-40	11	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTGGGATAATGAG	NA	False	NA	-4	True	AATAAA	-26	NA	42155204	42122798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
ES.30700.17	chr7	-	4134	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-54	-11	-40	11	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTGGGATAATGAG	NA	False	NA	-4	True	AATAAA	-26	NA	42155204	42122798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ES.30700.18	chr7	-	4008	6	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-14	9	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	98.7813747626545	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTCTTGGGATAATG	NA	False	NA	-6	True	AATAAA	-24	NA	42155178	42122800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
ES.30700.19	chr7	-	4548	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-13	5	intron_retention	FALSE	canonical	3	217	junction_5	45.7226420933874	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGCTGTCTTGGGAT	NA	False	NA	-10	True	AATAAA	-20	NA	42155177	42122804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
ES.30700.2	chr7	-	3466	9	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	29	84689	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.107932278445	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACGGTTTCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	42155120	42038120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42038376_42048303_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
ES.30700.20	chr7	-	4072	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTACTTACTGCTGTCT	NA	False	NA	-16	True	AATAAA	-14	NA	42155184	42122810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
ES.30700.21	chr7	-	4478	5	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	125	junction_4	83.5508827003043	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTACTTACTGCTGT	NA	False	NA	-18	True	AATAAA	-12	NA	42155183	42122812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42155033
ES.30700.22	chr7	-	3730	5	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	133.199802927782	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTACTTACTGCTGT	NA	False	NA	-18	True	AATAAA	-12	NA	42155150	42122812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42155033
ES.30700.23	chr7	-	3015	3	ISM	ENSMUSG00000092416.3	ENSMUST00000173489.3	637	5	16240	-2838	-12137	-961	3prime_fragment	FALSE	canonical	3	325	junction_1	4	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGTTATCTTT	NA	False	NA	-14	True	NA	NA	NA	42138924	42123770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_42126639_42137893_42137975_42138858
ES.30700.24	chr7	-	3038	6	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-15	-962	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	98.7813747626545	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCATGTTATCTT	NA	False	NA	-15	True	NA	NA	NA	42155179	42123771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
ES.30700.26	chr7	-	3127	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	-23	965	-9	-965	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGTTAT	NA	False	NA	-18	True	NA	NA	NA	42155173	42123774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ES.30700.27	chr7	-	3068	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-19	-966	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGTTA	NA	False	NA	-19	True	NA	NA	NA	42155183	42123775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
ES.30700.28	chr7	-	3545	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	2	-968	intron_retention	FALSE	canonical	3	217	junction_5	45.7226420933874	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42155147	42123777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
ES.30700.3	chr7	-	3580	10	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-3	82973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.325449900456	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155167	42039836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42039907_42048119_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
ES.30700.30	chr7	-	3082	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	3	-968	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42155161	42123777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
ES.30700.31	chr7	-	2328	8	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	2397	-968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	133.159870157672	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42152752	42123777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42125098_42125908_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42152567
ES.30700.33	chr7	-	3447	5	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	31	-969	intron_retention	FALSE	canonical	3	125	junction_4	83.5508827003043	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	NA	False	NA	-22	True	NA	NA	NA	42155118	42123778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42155033
ES.30700.34	chr7	-	871	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	12	-131	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGCACTGCATAATA	NA	False	NA	NA	False	AATAAA	-12	NA	42155137	42125964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
ES.30700.35	chr7	-	1423	1	Intergenic	novelGene_25278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42130711	42129288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42129300_42130700
ES.30700.36	chr7	-	159	1	Intergenic	novelGene_25279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	42132515	42132356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42132400_42132500
ES.30700.37	chr7	-	4274	1	Intergenic	novelGene_25282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTAGAAAGCGTCTATT	NA	False	NA	NA	False	NA	NA	NA	42144874	42140600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42140600_42144900
ES.30700.38	chr7	-	213	1	Intergenic	novelGene_25285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTCAGAAGCCTAGGTTT	NA	False	NA	NA	False	AAGAAA	-21	NA	42154318	42154105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42154100_42154300
ES.30700.4	chr7	-	3516	8	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-40	74727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.604850726308	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155204	42048082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
ES.30700.5	chr7	-	4918	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	3272	74727	intron_retention	FALSE	non_canonical	0	0	junction_1	140.332244651359	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42151877	42048082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781
ES.30700.6	chr7	-	3552	9	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-8	74727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.241831418908	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155172	42048082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
ES.30700.9	chr7	-	3958	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	-5	74727	intron_retention	FALSE	non_canonical	0	0	junction_1	139.242793549812	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	42155169	42048082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42048406_42048513_42048565_42123692_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42155033
ES.30701.1	chr7	+	374	3	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCTGCAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	42155228	42158297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42155413_42157017_42157122_42158211
ES.30701.2	chr7	+	439	3	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCTGCAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	42155252	42158297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42155502_42157017_42157122_42158211
ES.30701.3	chr7	+	3044	1	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCCGGCTGCAGACTGT	NA	False	NA	NA	False	NA	NA	NA	42155252	42158296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42155300_42158300
ES.30701.4	chr7	+	1944	2	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCTGCAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	42155263	42158297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42157122_42158211
ES.30701.5	chr7	+	319	3	Antisense	novelGene_ENSMUSG00000108491.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCTGCAGACTGTT	NA	False	NA	NA	False	NA	NA	NA	42155267	42158297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42155397_42157017_42157122_42158211
ES.30702.1	chr7	-	170	1	Intergenic	novelGene_25286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAACAAGTTCTGCTTA	NA	False	NA	NA	False	AAAAAG	-13	NA	42156928	42156758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42156800_42156900
ES.30703.1	chr7	+	164	1	Intergenic	novelGene_25287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAATACA	NA	False	NA	NA	False	NA	NA	NA	42175336	42175500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42175300_42175500
ES.30704.1	chr7	+	161	1	Intergenic	novelGene_25288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42189669	42189830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42189700_42189800
ES.30705.1	chr7	+	3487	2	Antisense	novelGene_ENSMUSG00000092335.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCCGTCCCTGAAAC	NA	False	NA	NA	False	AATACA	-36	NA	42230464	42234150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42232127_42232325
ES.30706.1	chr7	+	1662	1	Intergenic	novelGene_25289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42238467	42240129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42238500_42240100
ES.30707.1	chr7	+	175	1	Intergenic	novelGene_25290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	42240407	42240582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42240400_42240600
ES.30708.1	chr7	+	1036	1	Intergenic	novelGene_25291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGATAGAATGGATCT	NA	False	NA	NA	False	NA	NA	NA	42242097	42243133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42242100_42243100
ES.30709.1	chr7	+	156	1	Intergenic	novelGene_25298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42281975	42282131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42282000_42282100
ES.3071.1	chr10	-	201	1	Intergenic	novelGene_2395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATGTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	70691474	70691273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70691300_70691500
ES.30710.1	chr7	+	2282	1	Intergenic	novelGene_25299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATCAAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	42284493	42286775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42284500_42286800
ES.30711.1	chr7	+	162	1	Intergenic	novelGene_25300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42298678	42298840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42298700_42298800
ES.30712.1	chr7	+	173	1	Intergenic	novelGene_25303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAATAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42309007	42309180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42309000_42309200
ES.30713.1	chr7	+	2283	1	Intergenic	novelGene_25306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAATGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42334754	42337037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42334800_42337000
ES.30713.2	chr7	+	3014	1	Antisense	novelGene_ENSMUSG00000069727.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTCCAGGCCCAGAAAC	NA	False	NA	NA	False	AATACA	-42	NA	42334754	42337768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42334800_42337800
ES.30713.3	chr7	+	1753	1	Intergenic	novelGene_25305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42334754	42336507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42334800_42336500
ES.30714.1	chr7	+	181	1	Intergenic	novelGene_25308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAACTGTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	42393011	42393192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42393000_42393200
ES.30715.1	chr7	+	209	1	Intergenic	novelGene_25313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTACTTCCTGACAATG	NA	False	NA	NA	False	NA	NA	NA	42501662	42501871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42501700_42501900
ES.30716.1	chr7	-	4746	3	NNC	ENSMUSG00000092335.2	novel	1425	4	NA	NA	-2	50847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGGATAGCAAAAACTCT	NA	False	NA	NA	False	NA	NA	NA	42241973	42178359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42182866_42183064_42183192_42241860
ES.30716.10	chr7	-	3717	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	-36	-2256	-36	2256	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTATCTATTG	NA	False	NA	2	True	AGTAAA	-28	NA	42242007	42226950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.100	chr7	-	4218	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-27	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3752845215117	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATTTGTTTTTCTTA	NA	False	NA	-4	True	AATAAA	-24	NA	42516685	42466242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470178_42470287_42471782_42471844_42472041_42472168_42516547
ES.30716.101	chr7	-	4157	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	29	10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	86.8993670863028	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATTTGTTTTTCTTA	NA	False	NA	-4	True	AATAAA	-24	NA	42516629	42466242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470526_42470630_42471782_42471844_42472041_42472168_42516547
ES.30716.102	chr7	-	5842	3	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-10	4	intron_retention	FALSE	canonical	3	126	junction_2	42.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGTAATTTGTTT	NA	False	NA	-10	True	AATAAA	-18	NA	42516668	42466248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42471844_42472041_42472168_42516547
ES.30716.103	chr7	-	4101	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	-24	-4	-24	4	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGTAATTTGTTT	NA	False	NA	-10	True	AATAAA	-18	NA	42516682	42466248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
ES.30716.104	chr7	-	4104	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	11.7284080571728	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTAGTAATTTGTTT	NA	False	NA	-10	True	AATAAA	-18	NA	42516657	42466248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470132_42470287_42471782_42471844_42516547
ES.30716.105	chr7	-	4341	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	79.8262000988536	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516669	42466250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470283_42471782_42471844_42472041_42472168_42516547
ES.30716.107	chr7	-	4231	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	80.4378642182896	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516660	42466250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470132_42470287_42471782_42471844_42472041_42472168_42516547
ES.30716.108	chr7	-	3948	3	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	83	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516657	42466250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42470028_42471782_42471844_42516547
ES.30716.11	chr7	-	3680	4	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	44	2253	multi-exon	FALSE	canonical	1	2	junction_3	115.816905309871	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTTTTTCTTATCTA	NA	False	NA	-1	True	AGTAAA	-25	NA	42241927	42226953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42232329_42232503_42241860
ES.30716.110	chr7	-	4281	6	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5064159470267	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-12	True	AATAAA	-16	NA	42516657	42466250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470178_42470283_42470526_42470630_42471782_42471844_42472041_42472168_42516547
ES.30716.111	chr7	-	4072	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.6807680835579	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTCATTAGTAATTTG	NA	False	NA	-13	True	AATAAA	-15	NA	42516646	42466251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470038_42471782_42471844_42472041_42472168_42516547
ES.30716.112	chr7	-	628	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	-3547	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	86.8993670863028	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGCTCAAGTATCTTC	NA	False	NA	NA	False	NA	NA	NA	42516657	42469799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470526_42470630_42471782_42471844_42472041_42472168_42516547
ES.30716.113	chr7	-	5420	1	Intergenic	novelGene_25311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	42481817	42476397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42476400_42481800
ES.30716.114	chr7	-	4482	2	Intergenic	novelGene_25312	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42481021	42476435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42476629_42476732
ES.30716.115	chr7	-	7763	1	Genic_Genomic	ENSMUSG00000092225.2	novel	NA	NA	NA	NA	-32	-42675	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCCAGGTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	42516690	42508927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_42508900_42516700
ES.30716.12	chr7	-	3582	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-32	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42242003	42226954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42241860
ES.30716.13	chr7	-	3476	4	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	1	2252	multi-exon	FALSE	non_canonical	0	0	junction_1	107.707422626711	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42241970	42226954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42228871_42228943_42230333_42232070_42232132_42241860
ES.30716.14	chr7	-	3726	5	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	0	2251	multi-exon	FALSE	canonical	0	0	junction_3	123.811096029395	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTCTTATC	NA	False	NA	-3	True	AGTAAA	-23	NA	42241971	42226955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42232329_42232457_42241163_42241214_42241860
ES.30716.16	chr7	-	3243	5	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	8	2251	multi-exon	FALSE	canonical	1	2	junction_1	101.884738798311	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTCTTATC	NA	False	NA	-3	True	AGTAAA	-23	NA	42241963	42226955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42227043_42227467_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.17	chr7	-	3693	4	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-5	2249	multi-exon	FALSE	non_canonical	0	0	junction_3	116.759011072665	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAATTTGTTTTTCTTA	NA	False	NA	-5	True	AGTAAA	-21	NA	42241976	42226957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42232329_42232471_42241860
ES.30716.18	chr7	-	3767	5	Fusion	ENSMUSG00000092335.2_ENSMUSG00000074158.10_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-38	2242	multi-exon	TRUE	non_canonical	0	0	junction_3	123.811096029395	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTCATTAATTTGTT	NA	False	NA	-12	True	AGTAAA	-14	NA	42292050	42226964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42232329_42232457_42241796_42241883_42291925
ES.30716.19	chr7	-	3349	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	8	-1932	8	1932	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCTAAAGATCTCCCT	NA	False	NA	NA	False	NA	NA	NA	42241963	42227274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.2	chr7	-	3497	1	FSM	ENSMUSG00000108446.2	ENSMUST00000205775.2	3535	1	-804	842	676	-842	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGGGGGCATTCTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	42226983	42223486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42223500_42227000
ES.30716.20	chr7	-	2032	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	-2	-605	-2	605	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTGCTCATCACAG	NA	False	NA	NA	False	NA	NA	NA	42241973	42228601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.21	chr7	-	1122	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	-2	305	-2	-305	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTTGTCTCCGAATA	NA	False	NA	NA	False	NA	NA	NA	42241973	42229511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.22	chr7	-	511	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	-12	926	-12	-926	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTAATGAATGTGAT	NA	False	NA	0	True	NA	NA	NA	42241983	42230132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.23	chr7	-	322	3	NIC	ENSMUSG00000092335.2	novel	1425	4	NA	NA	43	-933	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	106	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCTACAAATGTAATGA	NA	False	NA	-7	True	NA	NA	NA	42241928	42230139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42230333_42232070_42232132_42241860
ES.30716.24	chr7	-	3687	1	Genic_Genomic	ENSMUSG00000092335.2	novel	NA	NA	NA	NA	-26	-9104	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGAATTATTATTATT	NA	False	NA	NA	False	NA	NA	NA	42241997	42238310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_42238300_42242000
ES.30716.25	chr7	-	7326	2	Intergenic	novelGene_25292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTATCTATGTAGACCAG	NA	False	NA	NA	False	NA	NA	NA	42284195	42245632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42245756_42276992
ES.30716.26	chr7	-	6256	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-42	-4238	-1	1260	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGAATTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	42292013	42257689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
ES.30716.27	chr7	-	6223	4	NNC	ENSMUSG00000074158.10	novel	1976	4	NA	NA	55	1260	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	40.3567425180312	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGAATTTTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	42291916	42257689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42263648_42265396_42265458_42265656_42265784_42291839
ES.30716.28	chr7	-	5058	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-79	-3003	-38	25	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTTTTTCCTCCTGG	NA	False	NA	2	True	NA	NA	NA	42292050	42258924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
ES.30716.29	chr7	-	5118	4	NNC	ENSMUSG00000074158.10	novel	1976	4	NA	NA	-38	21	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	40.3567425180312	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTGAGTTTTTCCTC	NA	False	NA	-2	True	NA	NA	NA	42292050	42258928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42263648_42265396_42265458_42265656_42265784_42291839
ES.30716.3	chr7	-	6250	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	4	-4829	4	-1733	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGGTAGCTTATCATC	NA	False	NA	NA	False	NA	NA	NA	42241967	42224377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.30	chr7	-	5016	4	NNC	ENSMUSG00000074158.10	novel	1976	4	NA	NA	12	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.6526695123626	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTGAGTTTTTCCT	NA	False	NA	-3	True	NA	NA	NA	42292000	42258929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42263648_42265396_42265458_42265656_42265797_42291903
ES.30716.33	chr7	-	4840	5	NNC	ENSMUSG00000074158.10	novel	1976	4	NA	NA	-20	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.9036607730705	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATCTCTTCTGAGAATT	NA	False	NA	-16	True	NA	NA	NA	42291991	42258942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42259042_42259182_42263648_42265396_42265458_42265656_42265784_42291903
ES.30716.34	chr7	-	4883	3	FSM	ENSMUSG00000074158.10	ENSMUST00000107994.3	4868	3	-15	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292027	42258949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42263648_42265396_42265458_42291903
ES.30716.35	chr7	-	4964	4	NNC	ENSMUSG00000074158.10	novel	1976	4	NA	NA	-2625	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6526695123626	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42294637	42258949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42263648_42265396_42265458_42265656_42265784_42294559
ES.30716.36	chr7	-	466	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-46	1556	-5	-1556	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAAGAACAAAT	NA	False	NA	NA	False	NA	NA	NA	42292017	42263483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
ES.30716.37	chr7	-	5932	2	Intergenic	novelGene_25294	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	42275946	42269962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42270179_42270230
ES.30716.38	chr7	-	6959	3	Intergenic	novelGene_25295	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	42326408	42269962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42270170_42270224_42276690_42326121
ES.30716.39	chr7	-	1562	2	Intergenic	novelGene_25293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	42271572	42269962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42270178_42270225
ES.30716.4	chr7	-	6194	4	Fusion	ENSMUSG00000092335.2_ENSMUSG00000074158.10_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-7	-1798	intron_retention	FALSE	canonical	3	27	junction_3	104.041658323321	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTTGTGGTGGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	42292019	42224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42232329_42232457_42291903
ES.30716.40	chr7	-	6023	1	Intergenic	novelGene_25296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAGGAGGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	42275988	42269965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42270000_42276000
ES.30716.41	chr7	-	1319	2	Intergenic	novelGene_25297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	42271370	42269999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42270187_42270238
ES.30716.42	chr7	-	9131	2	Genic_Genomic	ENSMUSG00000074158.10	novel	4868	3	NA	NA	-4	-19437	multi-exon	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGTAATAAATAATTAGG	NA	False	NA	NA	False	AAAAAG	-35	NA	42292016	42281364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_42285151_42286671
ES.30716.43	chr7	-	7898	5	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-26	4802	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	142.078103520564	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTTGGTGTAC	NA	False	NA	NA	False	NA	NA	NA	42342192	42304726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42306625_42306726_42312421_42314181_42314243_42314441_42314569_42342074
ES.30716.44	chr7	-	3839	3	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	48492	160519	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGCATTCTTTGTAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	42468166	42305733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42306517_42306710_42307064_42465463
ES.30716.45	chr7	-	246	1	Intergenic	novelGene_25301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42306705	42306459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42306500_42306700
ES.30716.46	chr7	-	157	2	Intergenic	novelGene_25302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	42306805	42306546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42306625_42306726
ES.30716.47	chr7	-	2627	5	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-25	1688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.078103520564	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	42342191	42307840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42308931_42311188_42312421_42314181_42314243_42314441_42314569_42342074
ES.30716.48	chr7	-	4850	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-14	-1688	10	1688	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	42342156	42307840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ES.30716.49	chr7	-	4743	3	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-10	1688	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	158	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTAGTAATTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	42342176	42307840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42312421_42314181_42314243_42342074
ES.30716.5	chr7	-	5443	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	-2	-2419	intron_retention	FALSE	canonical	3	30	junction_2	106	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTAGCCTCAGGTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	42241973	42225063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42230333_42232070_42232132_42241860
ES.30716.50	chr7	-	3234	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	-85	-1	-61	1	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGTGTCCTGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	42342227	42309527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ES.30716.51	chr7	-	3116	5	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	142.078103520564	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342177	42309528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42309844_42309910_42312421_42314181_42314243_42314441_42314569_42342074
ES.30716.52	chr7	-	3099	3	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	158	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342220	42309528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42312421_42314181_42314243_42342074
ES.30716.53	chr7	-	3257	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	156.043441244916	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342187	42309528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314441_42314569_42342010
ES.30716.54	chr7	-	3242	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	164.056900698101	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGGCGTGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	42342224	42309530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314441_42314583_42342074
ES.30716.55	chr7	-	3331	5	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	174.005747031528	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGCGTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	42342184	42309531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42312421_42314181_42314243_42314441_42314569_42340356_42340501_42342074
ES.30716.56	chr7	-	3003	2	NIC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-22	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGCGTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	42342188	42309531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42312421_42342074
ES.30716.57	chr7	-	3201	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	19519	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	164.056900698101	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGCGTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	42322623	42309531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314441_42314569_42322499
ES.30716.58	chr7	-	3333	5	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	174.005747031528	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGGCGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	42342187	42309533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314441_42314569_42317060_42317206_42342074
ES.30716.59	chr7	-	3308	5	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.259018524289	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGGCGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	42342127	42309533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314441_42314569_42338628_42338809_42342074
ES.30716.6	chr7	-	5576	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	-11	-4140	-11	-2422	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAAGTTAGCCTCAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	42241982	42225066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.60	chr7	-	3145	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.875717972917	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAACCTGGCGTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	42342159	42309534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42312421_42314181_42314243_42314455_42314569_42342074
ES.30716.61	chr7	-	2974	4	NNC	ENSMUSG00000069727.6	novel	3148	4	NA	NA	-22	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	156.514820029571	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAACCTGGCGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	42342188	42309535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42311868_42311953_42312421_42314181_42314243_42342074
ES.30716.62	chr7	-	2611	2	Intergenic	novelGene_25304	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAGAAGAAATAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	42336675	42332850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42333137_42334350
ES.30716.63	chr7	-	5737	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11956	2033	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTATTTGATGGTTCTTC	NA	False	NA	-21	True	AATAAA	-8	NA	42388397	42352859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.64	chr7	-	2401	5	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11967	2007	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.75961064797157	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	-47	True	NA	NA	NA	42388408	42352885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42352921_42356241_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.65	chr7	-	2864	5	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11953	2007	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.75961064797157	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	-47	True	NA	NA	NA	42388394	42352885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42352915_42355758_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.66	chr7	-	4420	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11973	699	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAATGACTACTTCTAT	NA	False	NA	NA	False	GATAAA	-33	NA	42388414	42354193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.67	chr7	-	4179	5	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11967	284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.7977752139969	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGTCTATTCCCACAAA	NA	False	NA	NA	False	AATAAA	-16	NA	42388408	42354608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42362996_42363177_42388298
ES.30716.68	chr7	-	4034	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-12004	282	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAGTCTATTCCCACA	NA	False	NA	NA	False	AATAAA	-14	NA	42388445	42354610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.69	chr7	-	4234	6	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11956	280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.5516232625549	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAAGTCTATTCCCA	NA	False	NA	NA	False	AATAAA	-12	NA	42388397	42354612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42362189_42362260_42362996_42363177_42388298
ES.30716.7	chr7	-	5389	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	1	-3965	1	-2597	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCATTGTGTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	42241970	42225241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.70	chr7	-	4620	5	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-23872	280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.7977752139969	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAAGTCTATTCCCA	NA	False	NA	NA	False	AATAAA	-12	NA	42400313	42354612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42399446_42400119_42400250
ES.30716.71	chr7	-	4051	5	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11967	191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.5542200082913	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATACCTCTGTATGTAT	NA	False	NA	NA	False	CATAAA	-22	NA	42388408	42354701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42364722_42364868_42388298
ES.30716.72	chr7	-	1789	1	ISM	ENSMUSG00000091594.3	ENSMUST00000166837.2	3673	4	18446	1314	-2202	-536	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42357995	42356206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_42356200_42358000
ES.30716.73	chr7	-	2286	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11956	-640	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGACATACTAAGGG	NA	False	NA	NA	False	NA	NA	NA	42388397	42356310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.74	chr7	-	2099	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11977	-848	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAAAGCTTTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	42388418	42356518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.75	chr7	-	574	4	NNC	ENSMUSG00000091594.3	novel	3673	4	NA	NA	-11959	-2355	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	2.44948974278318	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTGATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	42388400	42358025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42358310_42359840_42359902_42360100_42360228_42388298
ES.30716.76	chr7	-	2812	3	Antisense	novelGene_ENSMUSG00000092554.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCATAATTTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	42388405	42360616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42363177_42364722_42364868_42388298
ES.30716.77	chr7	-	6987	2	Intergenic	novelGene_25307	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAGAATAAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	42375794	42363646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42370032_42375192
ES.30716.78	chr7	-	4407	2	Antisense	novelGene_ENSMUSG00000092238.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGCATTGTATGAC	NA	False	NA	NA	False	AATAAA	-34	NA	42400339	42395800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42400119_42400250
ES.30716.79	chr7	-	3316	1	Intergenic	novelGene_25309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATTTGTCTTAACTCC	NA	False	NA	NA	False	NA	NA	NA	42450067	42446751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42446800_42450100
ES.30716.8	chr7	-	4971	5	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	12	-2606	intron_retention	FALSE	non_canonical	0	0	junction_1	102.738746342361	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGAGTACTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	42241959	42225250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_42227070_42227467_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.80	chr7	-	3555	1	Intergenic	novelGene_25310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAGTATCAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	42453944	42450389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42450400_42453900
ES.30716.81	chr7	-	9974	6	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	5645	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	85.286810234643	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGCC	NA	False	NA	NA	False	NA	NA	NA	42516657	42460607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470132_42470287_42470526_42470630_42471782_42471844_42472041_42472168_42516547
ES.30716.82	chr7	-	6362	2	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	48459	5641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	42468199	42460611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42463754_42464979
ES.30716.83	chr7	-	5728	2	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	49620	5641	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	42467038	42460611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42466883
ES.30716.84	chr7	-	8795	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	-26	-4696	-26	4696	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCCATTTATTGAC	NA	False	NA	2	True	AGTAAA	-25	NA	42516684	42461556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
ES.30716.85	chr7	-	7066	6	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	15	4692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.5354363565955	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTTCTGGCCCATTTAT	NA	False	NA	-2	True	AGTAAA	-21	NA	42516643	42461560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42467972_42470028_42470178_42470283_42471782_42471844_42472041_42472168_42516547
ES.30716.86	chr7	-	4919	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	4690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6807680835579	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACTTCTGGCCCATTT	NA	False	NA	-4	True	AGTAAA	-19	NA	42516657	42461562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42471782_42471844_42472041_42472168_42516547
ES.30716.87	chr7	-	8865	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	4	4688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3752845215117	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAACTTCTGGCCCAT	NA	False	NA	-6	True	AGTAAA	-17	NA	42516654	42461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470178_42470287_42471782_42471844_42472041_42472168_42516547
ES.30716.88	chr7	-	8162	6	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	4	4688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.4994545436514	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAACTTCTGGCCCAT	NA	False	NA	-6	True	AGTAAA	-17	NA	42516654	42461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42466883_42470028_42470178_42470283_42471782_42471844_42472041_42472168_42516547
ES.30716.89	chr7	-	9014	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	4	4686	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	72.2787812723916	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCCCAACTTCTGGCCC	NA	False	NA	-8	True	AGTAAA	-15	NA	42516654	42461566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470287_42471782_42471844_42472041_42472168_42516547
ES.30716.9	chr7	-	4587	4	FSM	ENSMUSG00000092335.2_ENSMUSG00000108446.2	ENSMUST00000173283.2	1425	4	5	-3167	5	3167	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTTTTTTTTTGATT	NA	False	NA	NA	False	TATAAA	-17	NA	42241966	42226039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ES.30716.90	chr7	-	8059	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	4686	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	75.089946064703	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGCCCAACTTCTGGCCC	NA	False	NA	-8	True	AGTAAA	-15	NA	42516657	42461566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42466883_42470028_42471782_42471844_42472041_42472168_42516547
ES.30716.91	chr7	-	7814	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-2	4681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.2725824924052	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516660	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42467126_42470028_42471782_42471844_42472041_42472168_42516547
ES.30716.92	chr7	-	10382	2	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	1	4681	intron_retention	FALSE	canonical	3	12	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516657	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42471844_42516547
ES.30716.93	chr7	-	10533	3	NIC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-24	4681	intron_retention	FALSE	canonical	3	126	junction_2	42.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516682	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42471844_42472041_42472168_42516547
ES.30716.94	chr7	-	9806	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	4	4681	intron_retention	FALSE	canonical	3	13	junction_1	81.1021304008443	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516654	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42466883_42471844_42472041_42472168_42516547
ES.30716.96	chr7	-	8731	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	5	4681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.0791413879619	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516653	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470028_42470178_42470287_42471782_42471844_42516547
ES.30716.97	chr7	-	8341	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-27	4681	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	78.8321000608255	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42516685	42461571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42466883_42470287_42471782_42471844_42472041_42472168_42516547
ES.30716.98	chr7	-	9364	4	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	-2	4643	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.2489935529041	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTAGTCTCTGTGTTGTT	NA	False	NA	-51	True	NA	NA	NA	42516660	42461609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42470674_42471782_42471844_42472041_42472168_42516547
ES.30716.99	chr7	-	4169	5	NNC	ENSMUSG00000092225.2	novel	4073	4	NA	NA	12	1896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.2725824924052	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGTGTCTCATT	NA	False	NA	NA	False	NA	NA	NA	42516646	42464356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42466185_42467972_42470028_42471782_42471844_42472041_42472168_42516547
ES.30717.1	chr7	+	174	1	Intergenic	novelGene_25314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	42532349	42532523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42532300_42532500
ES.30718.1	chr7	+	175	1	Antisense	novelGene_ENSMUSG00000090751.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGTATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42552310	42552485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_42552300_42552500
ES.30719.1	chr7	+	228	1	Intergenic	novelGene_25315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTTCAGAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	42597901	42598129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42597900_42598100
ES.3072.1	chr10	-	3533	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	-144	2042	-144	228	multi-exon	FALSE	canonical	1	4	junction_1	4.36205226928793	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCCAGAAAACTTAGAAGT	NA	False	NA	NA	False	AATGAA	-21	NA	70995674	70760703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.3072.10	chr10	-	2210	9	ISM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-161	27503	-151	-18103	5prime_fragment	FALSE	canonical	2	6	junction_4	4.63006479436303	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTCAGCCGCCTTAG	NA	False	NA	NA	False	AATAAA	-15	NA	70995681	70788434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.3072.11	chr10	-	191	1	Intergenic	novelGene_2396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAGAGTTCATATGCT	NA	False	NA	NA	False	NA	NA	NA	70845466	70845275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_70845300_70845500
ES.3072.2	chr10	-	3510	22	FSM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-52	-227	-42	227	multi-exon	FALSE	canonical	1	1	junction_2	4.79370335301786	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCCAGAAAACTTAGAAG	NA	False	NA	NA	False	AATGAA	-20	NA	70995572	70760704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.3072.3	chr10	-	3467	22	FSM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	-213	-23	-203	23	multi-exon	FALSE	canonical	1	1	junction_2	4.79370335301786	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAAAAGACAAGA	NA	False	NA	NA	False	NA	NA	NA	70995733	70760908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.3072.4	chr10	-	3340	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	-156	2247	-156	23	multi-exon	FALSE	canonical	1	4	junction_1	4.36205226928793	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAAAAGACAAGA	NA	False	NA	NA	False	NA	NA	NA	70995686	70760908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.3072.6	chr10	-	6725	1	NIC	ENSMUSG00000014329.15	novel	5431	21	NA	NA	14094	-2569	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCACCAAAAAA	NA	False	NA	NA	False	AAAAAG	-45	NA	70770225	70763500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_70763500_70770200
ES.3072.7	chr10	-	5348	1	NIC	ENSMUSG00000014329.15	novel	5431	21	NA	NA	14094	-3946	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTTTGTTCACCGTGA	NA	False	NA	NA	False	NA	NA	NA	70770225	70764877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_70764900_70770200
ES.3072.8	chr10	-	1952	10	NNC	ENSMUSG00000014329.15	novel	5431	21	NA	NA	-101	-18096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.0736223860962	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCGCCTTAGCGCCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	70995631	70788427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_70789013_70789224_70789357_70791953_70792206_70792851_70793044_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ES.30720.1	chr7	+	2003	1	Intergenic	novelGene_25316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATAGAGTAT	NA	False	NA	NA	False	NA	NA	NA	42658739	42660742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42658700_42660700
ES.30721.1	chr7	+	179	1	NIC	ENSMUSG00000091528.10	novel	2598	7	NA	NA	4497	-24633	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42672718	42672897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_42672700_42672900
ES.30722.1	chr7	-	172	1	Intergenic	novelGene_25317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAAAGAC	3986	False	NA	NA	False	NA	NA	NA	42707502	42707330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42707300_42707500
ES.30723.1	chr7	+	3927	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-20	1074	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	197	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATTCCCACAAACAATT	NA	False	NA	NA	False	AATAAA	-21	NA	42727454	42750341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.10	chr7	+	2627	4	NNC	ENSMUSG00000107181.2	novel	378	4	NA	NA	11	3229	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	9.20144916122817	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAGTCTGTGAGATGA	NA	False	NA	NA	False	NA	NA	NA	42727485	42749072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.100	chr7	+	2140	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-8	444	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	108.090240077446	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTTGGGGACACTCTTT	9990	False	NA	9	True	AATAAA	-11	NA	42863454	42876710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42870265_42870526_42872998_42873126_42873324_42873386_42875135
ES.30723.101	chr7	+	4739	6	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-7	16707	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	114.892297391949	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGCCTCAAATCTGGC	9991	False	NA	NA	False	AATAAA	-24	NA	42863455	42892973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135_42876337_42884606_42884794_42889926
ES.30723.102	chr7	+	450	4	NNC	ENSMUSG00000074887.5	novel	1428	4	NA	NA	-5	-302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.489264702426	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATCTTCGAATGCAT	9993	False	NA	NA	False	NA	NA	NA	42863457	42875455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873396_42875317
ES.30723.103	chr7	+	1644	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-4	-158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.693376063125	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCTTTGTATATGACT	9994	False	NA	NA	False	NA	NA	NA	42863458	42876108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42870265_42870636_42872998_42873126_42873324_42873386_42875135
ES.30723.104	chr7	+	3323	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	-4	-1827	-4	1827	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAAAACCTGA	9994	False	NA	NA	False	NA	NA	NA	42863458	42878093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ES.30723.105	chr7	+	1938	4	NNC	ENSMUSG00000074887.5	novel	1428	4	NA	NA	-4	442	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	106.019914271906	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGTTGGGGACACTCT	9994	False	NA	7	True	AATAAA	-9	NA	42863458	42876708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863636_42872998_42873126_42873324_42873386_42875135
ES.30723.106	chr7	+	4722	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-4	2920	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.693376063125	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTATAATCTTACTGAA	9994	False	NA	NA	False	NA	NA	NA	42863458	42879186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42870265_42870636_42872998_42873126_42873324_42873386_42875135
ES.30723.107	chr7	+	1074	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-1	355	-1	154	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAACCCTACAAATGTA	9997	False	NA	NA	False	NA	NA	NA	42863461	42875911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.108	chr7	+	2070	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-1	-641	-1	641	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGTATTTTCCTCATT	9997	False	NA	NA	False	AATGAA	-22	NA	42863461	42876907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.109	chr7	+	5115	8	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-9	16834	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	118.342636407327	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGAAGTTTTAACTTT	NA	False	NA	NA	False	AATAAA	-8	NA	42863471	42893100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135_42876337_42882321_42882483_42882879_42882984_42884606_42884794_42889926
ES.30723.11	chr7	+	4497	3	NNC	ENSMUSG00000107181.2	novel	378	4	NA	NA	11	60995	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAATTTGTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	42727485	42806838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42727598_42800443_42800571_42802580
ES.30723.110	chr7	+	1308	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	27	157	9	-157	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTTGTATATGACTA	NA	False	NA	NA	False	NA	NA	NA	42863489	42876109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ES.30723.111	chr7	+	3170	3	FSM	ENSMUSG00000074887.5	ENSMUST00000163106.2	810	3	-1394	-966	-1394	457	multi-exon	FALSE	canonical	3	215	junction_2	22.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTTGTAAATATATCCC	NA	False	NA	-6	True	AATAAA	-24	NA	42871604	42876723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42873126_42873324_42873386_42875135
ES.30723.112	chr7	+	1670	3	NNC	ENSMUSG00000074887.5	novel	810	3	NA	NA	336	6473	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	100.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTAATTTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	42873334	42882739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42873386_42875135_42876337_42882321
ES.30723.113	chr7	+	3364	1	Genic_Genomic	ENSMUSG00000074887.5	novel	NA	NA	NA	NA	1947	2043	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	42874945	42878309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_42874900_42878300
ES.30723.114	chr7	+	1141	1	Intergenic	novelGene_25327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42880106	42881247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42880100_42881200
ES.30723.115	chr7	+	3767	3	Intergenic	novelGene_25328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	6.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGCAATCTTCGTTGA	NA	False	NA	NA	False	ATTAAA	-12	NA	42884253	42893019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42884794_42884885_42885020_42889926
ES.30723.116	chr7	+	689	2	Intergenic	novelGene_25329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCACGCCTGTGTGCA	NA	False	NA	-6	True	NA	NA	NA	42884811	42890407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42885020_42889926
ES.30723.117	chr7	+	3297	2	Intergenic	novelGene_25330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGCAATCTTCGTTGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	42884816	42893020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42885020_42889926
ES.30723.118	chr7	+	4553	1	Intergenic	novelGene_25331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCTGTGTGCATTTGGC	NA	False	NA	0	True	NA	NA	NA	42885860	42890413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42885900_42890400
ES.30723.119	chr7	+	293	1	Intergenic	novelGene_25332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGAGAGAGAGGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	42893459	42893752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42893500_42893800
ES.30723.120	chr7	+	1897	4	Intergenic	novelGene_25333	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	13.6707311029399	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCTGTATATTGTTCT	NA	False	NA	17	True	AATAAA	-17	NA	42903148	42918675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42910522_42910591_42917116
ES.30723.121	chr7	+	2873	5	Intergenic	novelGene_25334	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	93.0994092355048	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTCTGTGATGCGT	NA	False	NA	26	True	AATAAA	-26	NA	42903148	42918684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710_42913685_42917116
ES.30723.122	chr7	+	2800	5	Intergenic	novelGene_25335	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGTATTGACATTTT	NA	False	NA	NA	False	NA	NA	NA	42903152	42915069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.123	chr7	+	6416	5	Intergenic	novelGene_25336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTCTGTGATGCGTCT	NA	False	NA	28	True	AATAAA	-28	NA	42903153	42918686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.124	chr7	+	2982	6	Intergenic	novelGene_25337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	76.4973202145016	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTCTGTGATGCGTC	NA	False	NA	27	True	AATAAA	-27	NA	42903154	42918685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710_42913685_42917116
ES.30723.125	chr7	+	2671	4	Intergenic	novelGene_25338	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	80.425258608364	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903159	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710
ES.30723.126	chr7	+	6274	4	Intergenic	novelGene_25340	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	80.425258608364	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTGTATATTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	42903169	42918674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710
ES.30723.127	chr7	+	2839	5	Intergenic	novelGene_25339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	81.5578782215428	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903169	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903356_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.128	chr7	+	1380	3	Intergenic	novelGene_25342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	39	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42903170	42918261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906867_42906982_42917116
ES.30723.129	chr7	+	2855	3	Intergenic	novelGene_25341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	83.5	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903170	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910493_42912710
ES.30723.13	chr7	+	3531	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	12	710	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	192	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGTTTAGTTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	42727486	42749977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.130	chr7	+	6417	5	Intergenic	novelGene_25343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	83.0432869050834	173	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTGTATATTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	42903170	42918674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906837_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.131	chr7	+	863	5	Intergenic	novelGene_25344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	148	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCCTTCAAATGTA	NA	False	NA	NA	False	NA	NA	NA	42903171	42913151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.132	chr7	+	2666	4	Intergenic	novelGene_25345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	9.97775303139718	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903175	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42910518_42910591_42912710
ES.30723.133	chr7	+	2729	4	Intergenic	novelGene_25346	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	43.0916336298462	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903182	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42906839_42906982_42910109_42910237_42912710
ES.30723.134	chr7	+	6169	3	Intergenic	novelGene_25347	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	9.5	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTGTATATTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	42903213	42918674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42903292_42910109_42910237_42912710
ES.30723.135	chr7	+	4976	4	Intergenic	novelGene_25348	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	94.0886107170611	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42903573	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42904648_42908746_42910237_42910431_42910493_42912710
ES.30723.136	chr7	+	4428	4	Intergenic	novelGene_25350	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	96	junction_1	48.8739876280488	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTTTAAGTCATCAA	NA	False	NA	NA	False	NA	NA	NA	42905111	42915080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.137	chr7	+	7129	4	Intergenic	novelGene_25351	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	93.6174247788424	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42905383	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42909974_42910109_42910237_42910431_42910493_42912710
ES.30723.138	chr7	+	4391	1	Intergenic	novelGene_25352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCCCTCCCCTACACTT	NA	False	NA	NA	False	NA	NA	NA	42906839	42911230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42906800_42911200
ES.30723.139	chr7	+	2104	3	Intergenic	novelGene_25353	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	196	junction_2	3.5	145	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATCTTCGAGTTCATGA	NA	False	NA	NA	False	NA	NA	NA	42908431	42912948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42910237_42910431_42910493_42912710
ES.30723.14	chr7	+	3198	4	Fusion	ENSMUSG00000107181.2_ENSMUSG00000064194.11	novel	1368	3	NA	NA	12	194	intron_retention	FALSE	non_canonical	0	0	junction_3	204.491238606124	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGCCCAGGTATATTC	NA	False	NA	NA	False	NA	NA	NA	42727486	42840099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42836593_42836721_42836916_42838745_42838967
ES.30723.140	chr7	+	4178	3	Intergenic	novelGene_25354	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	196	junction_2	3.5	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42908470	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42910237_42910431_42910493_42912710
ES.30723.141	chr7	+	2770	3	Intergenic	novelGene_25355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	196	junction_2	3.5	162	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATCCCAGTTATGACTG	NA	False	NA	NA	False	NA	NA	NA	42909259	42914442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42910237_42910431_42910493_42912710
ES.30723.142	chr7	+	2702	3	Intergenic	novelGene_25356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	10.5	165	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42909953	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42910237_42910522_42910591_42912710
ES.30723.15	chr7	+	2902	4	Fusion	ENSMUSG00000107181.2_ENSMUSG00000064194.11	novel	1368	3	NA	NA	16	21	multi-exon	FALSE	non_canonical	0	0	junction_3	204.491238606124	468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCTCATTTACATTTC	NA	False	NA	NA	False	AATATA	-14	NA	42727490	42841554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42836593_42836721_42836916_42836978_42838947
ES.30723.17	chr7	+	2847	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	21	35	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACACATACTGGCGAGAAA	NA	False	NA	NA	False	NA	NA	NA	42727495	42749302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.18	chr7	+	3745	3	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	26	1065	multi-exon	FALSE	canonical	3	9	junction_1	45.5	197	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAATCCTATTCCCA	NA	False	NA	NA	False	AATAAA	-12	NA	42727500	42750332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42742038_42742100_42746745
ES.30723.19	chr7	+	5526	3	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-7431	2815	multi-exon	FALSE	canonical	3	100	junction_2	0.5	207	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTGATGGTTCTTCT	NA	False	NA	5	True	NA	NA	NA	42741711	42752082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42741840_42742038_42742100_42746745
ES.30723.2	chr7	+	5694	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-20	2841	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGCTACAGGTTTCTT	NA	False	NA	31	True	NA	NA	NA	42727454	42752108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.20	chr7	+	5300	1	FSM	ENSMUSG00000071952.4	ENSMUST00000087694.5	125	1	-2399	-2776	-2399	2776	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-34	True	NA	NA	NA	42746743	42752043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42746700_42752000
ES.30723.21	chr7	+	2723	4	NNC	ENSMUSG00000064194.11	novel	595	4	NA	NA	-78	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	207.220226383001	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGTTGGGGGCACTCT	NA	False	NA	1	True	AATAAA	-9	NA	42763574	42841350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42763707_42836593_42836721_42836916_42836978_42838947
ES.30723.22	chr7	+	4652	4	NNC	ENSMUSG00000064194.11	novel	595	4	NA	NA	-60	-32098	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	29.9369708257569	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTTCATTAATAATTT	NA	False	NA	NA	False	NA	NA	NA	42763592	42806828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42763707_42800443_42800571_42800769_42800933_42802580
ES.30723.24	chr7	+	4456	4	NNC	ENSMUSG00000064194.11	novel	595	4	NA	NA	-56	-176	intron_retention	FALSE	non_canonical	0	0	junction_3	207.220226383001	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGGCACTCTTTATAAA	NA	False	NA	8	True	AATAAA	-16	NA	42763596	42841357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42763707_42836593_42836721_42836916_42838749_42838970
ES.30723.25	chr7	+	4491	3	NNC	ENSMUSG00000064194.11	novel	595	4	NA	NA	-53	-32089	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	34.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATAATTTGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	42763599	42806837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42763707_42800443_42800571_42802580
ES.30723.26	chr7	+	6281	4	NNC	ENSMUSG00000064194.11	novel	595	4	NA	NA	-31	3422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	207.220226383001	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGGTTTTCCAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	42763621	42844955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42763707_42836593_42836721_42836916_42836978_42838947
ES.30723.27	chr7	+	4640	1	Intergenic	novelGene_25318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCATTAATAATTTGT	NA	False	NA	NA	False	NA	NA	NA	42802190	42806830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42802200_42806800
ES.30723.28	chr7	+	243	1	Intergenic	novelGene_25319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42807877	42808120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42807900_42808100
ES.30723.29	chr7	+	2942	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-40	-156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	176.4291642558	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCCAGTGCATTTGCC	NA	False	NA	28	True	AATAAA	-36	NA	42826971	42841377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.3	chr7	+	5852	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-15	3004	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTTGTCCCTGATG	NA	False	NA	NA	False	ACTAAA	-18	NA	42727459	42752271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.30	chr7	+	2756	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-27	-161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTCCCAGTGCAT	NA	False	NA	23	True	AATAAA	-31	NA	42826984	42841372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ES.30723.31	chr7	+	2100	6	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-27	3406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	195.496700739424	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTCCATTTCGTTC	NA	False	NA	NA	False	NA	NA	NA	42826984	42844939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982_42840339_42844729
ES.30723.32	chr7	+	2973	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-26	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.21800007764	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGGCACTCTTTAT	NA	False	NA	5	True	AATAAA	-13	NA	42826985	42841354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836579_42836721_42836916_42836978_42838725
ES.30723.33	chr7	+	730	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-22	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAATCTCCGAATACAT	NA	False	NA	9	True	NA	NA	NA	42826989	42839351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ES.30723.34	chr7	+	2800	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-22	3417	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	173.969824969734	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGTTCAGGTTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	42826989	42844950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42840979_42844729
ES.30723.35	chr7	+	2972	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-16	156	-16	-156	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCCAGTGCATTTGCC	NA	False	NA	28	True	AATAAA	-36	NA	42826995	42841377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ES.30723.36	chr7	+	889	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-13	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAATCTCCGAATACAT	NA	False	NA	9	True	NA	NA	NA	42826998	42839351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.37	chr7	+	2939	6	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-12	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	208.420152576472	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGGGGGCACTCTTTA	NA	False	NA	4	True	AATAAA	-12	NA	42826999	42841353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42827770_42827821_42836593_42836721_42836916_42836978_42838725_42838902_42838956
ES.30723.38	chr7	+	3119	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTTAATTATG	NA	False	NA	NA	False	AATGAA	-10	NA	42827004	42841533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ES.30723.39	chr7	+	3030	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-7	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	196.935268552893	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTGGGGGCACTCTTT	NA	False	NA	3	True	AATAAA	-11	NA	42827004	42841352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466_42838559_42838725
ES.30723.4	chr7	+	5540	3	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	-14	2820	multi-exon	FALSE	canonical	3	9	junction_1	45.5	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTTCTTCTATTGC	NA	False	NA	10	True	NA	NA	NA	42727460	42752087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42742038_42742100_42746745
ES.30723.40	chr7	+	2070	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	1048	-6	580	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAATGTTATCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	42827005	42840485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ES.30723.41	chr7	+	2899	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-6	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.287627967645	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGGCACTCTTTAT	NA	False	NA	5	True	AATAAA	-13	NA	42827005	42841354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836579_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.42	chr7	+	1252	6	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-6	3368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	192.480024937654	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	42827005	42844901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466_42838575_42838725_42839388_42844729
ES.30723.43	chr7	+	3931	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	-6	-813	-6	813	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTGTGTAAATGTACCA	NA	False	NA	NA	False	NA	NA	NA	42827005	42842346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ES.30723.44	chr7	+	5876	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-6	2812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGATTGCTTTAATGT	NA	False	NA	NA	False	NA	NA	NA	42827005	42844345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.45	chr7	+	1461	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-5	194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGCCCAGGTATATTC	NA	False	NA	NA	False	NA	NA	NA	42827006	42840099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ES.30723.46	chr7	+	6425	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-3	3364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAATAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	42827008	42844897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.47	chr7	+	2774	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-2	73531	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	68.710897971137	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAACTCAGTATTGAC	NA	False	NA	NA	False	NA	NA	NA	42827009	42915064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.48	chr7	+	2723	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	0	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.560124771785	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTGGGGGCACTCTTT	NA	False	NA	3	True	AATAAA	-11	NA	42827011	42841352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836579_42836721_42836916_42836978_42838947
ES.30723.49	chr7	+	2454	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	2	273	intron_retention	FALSE	non_canonical	0	0	junction_3	195.192782198068	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAATCTCCGAATACAT	NA	False	NA	9	True	NA	NA	NA	42827013	42839351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42838749_42838970
ES.30723.5	chr7	+	729	4	Fusion	ENSMUSG00000107181.2_ENSMUSG00000064194.11	novel	1368	3	NA	NA	-10	277	multi-exon	FALSE	non_canonical	0	0	junction_3	204.491238606124	451	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCTCCGAATACATGAAA	NA	False	NA	13	True	NA	NA	NA	42727464	42839355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42836593_42836721_42836916_42836978_42838947
ES.30723.50	chr7	+	2896	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	2	-161	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	176.4291642558	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTCCCAGTGCAT	NA	False	NA	23	True	AATAAA	-31	NA	42827013	42841372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838920_42838972
ES.30723.51	chr7	+	11111	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	3	8056	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGAGAATTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	42827014	42849589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.52	chr7	+	1537	3	ISM	ENSMUSG00000064194.11	ENSMUST00000200973.4	578	5	-29	710	6	-710	5prime_fragment	FALSE	canonical	3	311	junction_1	79.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAAGGTAAATCTGT	NA	False	NA	NA	False	NA	NA	NA	42827017	42838216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_42827128_42836593_42836721_42836916
ES.30723.53	chr7	+	2200	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	6	-132	intron_retention	TRUE	non_canonical	0	0	junction_3	195.192782198068	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTCTTCGGGTACATGA	NA	False	NA	NA	False	NA	NA	NA	42827017	42839773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42838749_42839642
ES.30723.54	chr7	+	1499	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	6	193	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	202.51342548088	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACAGCCCAGGTATATT	NA	False	NA	NA	False	NA	NA	NA	42827017	42840098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42827770_42827821_42836593_42836721_42836916_42836978_42838947
ES.30723.55	chr7	+	536	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	6	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATCTTAGATTACATGA	NA	False	NA	NA	False	NA	NA	NA	42827017	42839017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.57	chr7	+	4450	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	6	-181	intron_retention	TRUE	non_canonical	0	0	junction_3	195.192782198068	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTGGGGGCACTCTTT	NA	False	NA	3	True	AATAAA	-11	NA	42827017	42841352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42838759_42838981
ES.30723.58	chr7	+	2741	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	7	73528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.5148248275531	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42827018	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42910109_42910330_42910431_42910493_42912710
ES.30723.59	chr7	+	2387	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	7	718	7	-718	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATTACCAACATAATCA	NA	False	NA	NA	False	NA	NA	NA	42827018	42840815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ES.30723.6	chr7	+	4483	4	Fusion	ENSMUSG00000107181.2_ENSMUSG00000064194.11	novel	1368	3	NA	NA	1	-161	intron_retention	TRUE	non_canonical	0	0	junction_3	204.491238606124	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTCCCAGTGCAT	NA	False	NA	23	True	AATAAA	-31	NA	42727475	42841372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42836593_42836721_42836916_42838749_42838970
ES.30723.60	chr7	+	2655	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	8	73528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.0886107170611	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42827019	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42910101_42910237_42910431_42910493_42912710
ES.30723.62	chr7	+	2923	6	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	9	-176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	208.420152576472	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGGCACTCTTTATAAA	NA	False	NA	8	True	AATAAA	-16	NA	42827020	42841357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42827770_42827821_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.63	chr7	+	6381	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	13	77153	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	68.710897971137	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTCTGTGATGCGTCT	NA	False	NA	28	True	AATAAA	-28	NA	42827024	42918686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42906867_42906982_42910109_42910237_42910431_42910493_42912710
ES.30723.64	chr7	+	3248	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	13	77141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.6400600184464	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTGTATATTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	42827024	42918674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42910109_42910237_42910431_42910493_42912710_42914110_42917116
ES.30723.65	chr7	+	2742	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	17	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	202.51342548088	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTGGGGGCACTCTTT	NA	False	NA	3	True	AATAAA	-11	NA	42827028	42841352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42827770_42827821_42836593_42836721_42836916_42836978_42838947
ES.30723.66	chr7	+	3842	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	17	801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.4291642558	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACAGTACTCCATTGT	NA	False	NA	NA	False	NA	NA	NA	42827028	42842334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.67	chr7	+	2868	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	17	73758	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	63.4682772904876	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATTGGGTAGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	42827028	42915291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42910109_42910237_42910431_42910493_42912710
ES.30723.68	chr7	+	530	4	ISM	ENSMUSG00000064194.11	ENSMUST00000200973.4	578	5	-16	215	-16	-215	5prime_fragment	FALSE	canonical	3	27	junction_3	183.238157113147	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCATTGCAGGCACAA	NA	False	NA	NA	False	NA	NA	NA	42827030	42838711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838466
ES.30723.69	chr7	+	2694	6	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	-4	3418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	194.32282418697	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTTCAGGTTTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	42827042	42844951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725_42838929_42838982_42840979_42844729
ES.30723.7	chr7	+	4446	4	NNC	ENSMUSG00000107181.2	novel	378	4	NA	NA	9	60985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.6144555520604	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTTCATTAATAATTT	NA	False	NA	NA	False	NA	NA	NA	42727483	42806828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42727598_42800443_42800571_42802580_42804218_42804260
ES.30723.70	chr7	+	5670	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-3	2812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGATTGCTTTAATGT	NA	False	NA	NA	False	NA	NA	NA	42827043	42844345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ES.30723.71	chr7	+	6259	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	2	3406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.192782198068	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTCCATTTCGTTC	NA	False	NA	NA	False	NA	NA	NA	42827048	42844939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836593_42836721_42836916_42836978_42838947
ES.30723.72	chr7	+	4412	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	26	-179	intron_retention	FALSE	non_canonical	0	0	junction_1	221.560124771785	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGGCACTCTTTAT	NA	False	NA	5	True	AATAAA	-13	NA	42827072	42841354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42836579_42836721_42836916_42838749_42838970
ES.30723.73	chr7	+	2704	5	NNC	ENSMUSG00000064194.11	novel	578	5	NA	NA	37	73528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.688758734369	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAACTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	42827083	42915061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42827128_42906867_42906982_42910109_42910237_42910522_42910591_42912710
ES.30723.74	chr7	+	5862	3	NNC	ENSMUSG00000064194.11	novel	1368	3	NA	NA	-4522	194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	235	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGCCCAGGTATATTC	NA	False	NA	NA	False	NA	NA	NA	42832071	42840099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42836721_42836916_42836978_42838947
ES.30723.75	chr7	+	6731	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-3969	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	203.21800007764	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGGCACTCTTTAT	NA	False	NA	5	True	AATAAA	-13	NA	42832624	42841354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42836721_42836916_42836978_42838725_42838931_42838985
ES.30723.76	chr7	+	6957	2	ISM	ENSMUSG00000064194.11	ENSMUST00000072829.4	1368	3	-2369	-1472	-2369	-156	intron_retention	FALSE	canonical	3	470	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCCAGTGCATTTGCC	NA	False	NA	28	True	AATAAA	-36	NA	42834224	42841377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_42836721_42836916
ES.30723.77	chr7	+	4782	2	NNC	ENSMUSG00000064194.11	novel	1368	3	NA	NA	-2243	276	intron_retention	FALSE	non_canonical	0	0	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCTCCGAATACATGAA	NA	False	NA	12	True	NA	NA	NA	42834350	42839354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42838749_42838970
ES.30723.78	chr7	+	4289	6	NNC	ENSMUSG00000074887.5	novel	810	3	NA	NA	-29085	14150	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	111.72358748268	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGCATTTGGCCTC	NA	False	NA	3	True	NA	NA	NA	42834377	42890416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42834800_42871197_42873126_42873324_42873386_42875135_42876337_42884606_42884794_42889926
ES.30723.79	chr7	+	6501	2	NNC	ENSMUSG00000064194.11	novel	1368	3	NA	NA	-1964	-181	intron_retention	FALSE	non_canonical	0	0	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTTGGGGGCACTCTTT	NA	False	NA	3	True	AATAAA	-11	NA	42834629	42841352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42838749_42838970
ES.30723.8	chr7	+	4661	4	NNC	ENSMUSG00000107181.2	novel	378	4	NA	NA	10	60995	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.0362033908947	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAATTTGTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	42727484	42806838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42727598_42800443_42800571_42800769_42800933_42802580
ES.30723.80	chr7	+	3851	4	NNC	ENSMUSG00000064194.11	novel	3112	4	NA	NA	-1070	-161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	203.21800007764	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTCCCAGTGCAT	NA	False	NA	23	True	AATAAA	-31	NA	42835523	42841372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42836721_42836916_42836978_42838725_42838929_42838982
ES.30723.81	chr7	+	6284	1	Intergenic	novelGene_25323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42842395	42848679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42842400_42848700
ES.30723.82	chr7	+	207	1	Intergenic	novelGene_25324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAGGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	42851475	42851682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42851500_42851700
ES.30723.83	chr7	+	2632	1	Intergenic	novelGene_25325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTCAATGGTTGCTCCT	1245	False	NA	NA	False	AATAAA	-11	NA	42854709	42857341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42854700_42857300
ES.30723.84	chr7	+	3202	1	Intergenic	novelGene_25326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	6377	False	NA	NA	False	NA	NA	NA	42859841	42863043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42859800_42863000
ES.30723.85	chr7	+	1997	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	-37	-468	-37	468	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATCCCATGCATTTGCC	9961	False	NA	5	True	AATAAA	-35	NA	42863425	42876734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ES.30723.86	chr7	+	1982	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-36	-518	-36	518	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGGGTGTGGCTGTGT	9962	False	NA	55	True	NA	NA	NA	42863426	42876784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.87	chr7	+	1716	6	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-34	446	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	110.535786060443	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGGGACACTCTTTGT	9964	False	NA	11	True	AATAAA	-13	NA	42863428	42876712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42870265_42870410_42872998_42873126_42873324_42873386_42875135_42875472_42875807
ES.30723.88	chr7	+	4392	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-34	-2930	-34	2930	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACTGAAAATTCTGGTT	9964	False	NA	NA	False	NA	NA	NA	42863428	42879196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.89	chr7	+	2199	6	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-26	14148	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	114.892297391949	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTGTGCATTTGGCC	9972	False	NA	1	True	NA	NA	NA	42863436	42890414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135_42876337_42884606_42884794_42889926
ES.30723.9	chr7	+	6090	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	10	3267	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATTTTCACTTATCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	42727484	42752534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
ES.30723.90	chr7	+	3514	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-22	-2064	-22	2064	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGAATTCATAAGATTC	9976	False	NA	NA	False	NA	NA	NA	42863440	42878330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.91	chr7	+	562	4	NNC	ENSMUSG00000074887.5	novel	1428	4	NA	NA	-13	-629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.489264702426	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAGGCACAAAATCACT	9985	False	NA	NA	False	NA	NA	NA	42863449	42875128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42874876
ES.30723.92	chr7	+	4433	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	-13	-2928	-13	2928	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTACTGAAAATTCTGG	9985	False	NA	NA	False	NA	NA	NA	42863449	42879194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ES.30723.93	chr7	+	3363	4	NIC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-13	-302	intron_retention	FALSE	canonical	3	51	junction_1	89.8158610095616	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATCTTCGAATGCAT	9985	False	NA	NA	False	NA	NA	NA	42863449	42875455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_42863572_42870265_42873126_42873324_42873386_42875135
ES.30723.94	chr7	+	501	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-13	940	-13	-431	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACCCTACAAATGTAAT	9985	False	NA	NA	False	NA	NA	NA	42863449	42875326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.95	chr7	+	720	5	NNC	ENSMUSG00000074887.5	novel	1492	5	NA	NA	-12	-302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.06765196696	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATCTTCGAATGCAT	9986	False	NA	NA	False	NA	NA	NA	42863450	42875455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42872998_42873126_42873324_42873386_42874876_42875157_42875324
ES.30723.96	chr7	+	796	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-12	14148	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGTGTGCATTTGGCC	9986	False	NA	1	True	NA	NA	NA	42863450	42890414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42884606_42884794_42889926
ES.30723.97	chr7	+	796	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-12	644	-12	-135	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTTGTCTCCGAAAACA	9986	False	NA	NA	False	NA	NA	NA	42863450	42875622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.98	chr7	+	5160	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	-12	-3720	-12	3720	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTTCTTTAGGGGGC	9986	False	NA	NA	False	NA	NA	NA	42863450	42879986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ES.30723.99	chr7	+	3342	3	NNC	ENSMUSG00000074887.5	novel	1386	3	NA	NA	-8	16698	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACAGGTATGCCTC	9990	False	NA	NA	False	AATAAA	-15	NA	42863454	42892964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42863572_42884606_42884794_42889926
ES.30724.1	chr7	-	2250	3	Antisense	novelGene_ENSMUSG00000107181.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACACCCAAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	42748086	42740992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42741846_42742043_42742098_42746743
ES.30724.2	chr7	-	4947	1	Antisense	novelGene_ENSMUSG00000107181.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACACCCAAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	42745939	42740992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42741000_42745900
ES.30725.1	chr7	-	11834	5	Antisense	novelGene_ENSMUSG00000064194.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATATATTGGCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	42842889	42774976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42775094_42805580_42805660_42830835_42836727_42836921_42838756_42838976
ES.30725.2	chr7	-	148	1	Intergenic	novelGene_25320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	42817719	42817571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42817600_42817700
ES.30725.3	chr7	-	2381	1	Intergenic	novelGene_25321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	42829974	42827593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42827600_42830000
ES.30725.4	chr7	-	1781	1	Intergenic	novelGene_25322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCAAAAAGACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	42829974	42828193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42828200_42830000
ES.30726.1	chr7	-	6461	1	Antisense	novelGene_ENSMUSG00000074887.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42871704	42865243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42865200_42871700
ES.30726.2	chr7	-	3396	1	Antisense	novelGene_ENSMUSG00000074887.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGCTCCAAGGTATA	NA	False	NA	NA	False	AATGAA	-34	NA	42871704	42868308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42868300_42871700
ES.30726.3	chr7	-	2814	3	Antisense	novelGene_ENSMUSG00000074887.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCCAACAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	42875918	42871156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_42873132_42873329_42873384_42875133
ES.30727.1	chr7	-	2104	1	Intergenic	novelGene_25349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42906987	42904883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42904900_42907000
ES.30728.1	chr7	-	178	1	Intergenic	novelGene_25357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAACAACAGTA	NA	False	NA	NA	False	NA	NA	NA	42919702	42919524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42919500_42919700
ES.30729.1	chr7	-	2789	1	Intergenic	novelGene_25358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42928705	42925916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42925900_42928700
ES.3073.1	chr10	-	4038	7	NNC	ENSMUSG00000003923.15	novel	4167	7	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	147.107009425867	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTTTTTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	71073494	71061290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073185
ES.3073.10	chr10	-	1852	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	222	2093	222	889	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACATGCTTTCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	71073888	71063386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.11	chr10	-	1829	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	24	-954	24	888	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACATGCTTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	71073484	71063387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
ES.3073.12	chr10	-	1576	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	120	2471	120	511	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTCTGAAATTATGTAT	NA	False	NA	-9	True	AATAAA	-19	NA	71073990	71063764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.13	chr10	-	2314	6	ISM	ENSMUSG00000003923.15	ENSMUST00000105432.10	779	7	186	-518	186	507	3prime_fragment	FALSE	canonical	3	350	junction_5	33.3190636122926	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTCTGAAATTAT	NA	False	NA	-13	True	AATAAA	-15	NA	71073924	71063768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745
ES.3073.14	chr10	-	4094	5	NNC	ENSMUSG00000003923.15	novel	4167	7	NA	NA	213	507	intron_retention	FALSE	canonical	0	0	junction_3	166.920639826236	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTCTGAAATTAT	NA	False	NA	-13	True	AATAAA	-15	NA	71073897	71063768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71064530_71064916_71064974_71069186_71069483_71069615_71071444_71072745
ES.3073.15	chr10	-	3224	2	ISM	ENSMUSG00000003923.15	ENSMUST00000145220.2	596	5	3772	-507	3772	507	3prime_fragment	FALSE	canonical	3	425	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTCTGAAATTAT	2459	False	NA	-13	True	AATAAA	-15	NA	71067379	71063768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_71064530_71064916
ES.3073.16	chr10	-	1321	7	NNC	ENSMUSG00000003923.15	novel	4167	7	NA	NA	-20	506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	147.107009425867	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACATGTTTCTGAAATTA	NA	False	NA	-14	True	AATAAA	-14	NA	71073528	71063769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073457
ES.3073.17	chr10	-	956	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	216	2995	216	-2	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTCAGATCATTTTTCT	NA	False	NA	NA	False	GATAAA	-15	NA	71073894	71064288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.2	chr10	-	4016	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	-66	-3051	-66	3	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTTTTTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	71073574	71061290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
ES.3073.3	chr10	-	4046	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	121	0	121	0	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTTTTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71073989	71061293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.5	chr10	-	3818	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	205	144	205	-144	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAATTGTTTATCATTC	NA	False	NA	NA	False	NA	NA	NA	71073905	71061437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.6	chr10	-	3046	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	-38	-2109	-38	-939	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTTCCATGTCCTG	NA	False	NA	NA	False	AAAACA	-20	NA	71073546	71062232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
ES.3073.7	chr10	-	3014	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	214	939	214	-939	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTTTCCATGTCCTG	NA	False	NA	NA	False	AAAACA	-20	NA	71073896	71062232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.3073.9	chr10	-	2573	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	208	1386	208	-1386	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGATTGGAATTCTGGG	NA	False	NA	NA	False	AATATA	-8	NA	71073902	71062679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ES.30730.1	chr7	-	186	1	Intergenic	novelGene_25359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAAGATCTCTCTATG	NA	False	NA	11	True	NA	NA	NA	42933764	42933578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42933600_42933800
ES.30731.1	chr7	-	5356	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	1	-1173	1	847	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATAATTTCATTTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	42962678	42944773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ES.30731.10	chr7	-	4159	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	37.0607609204128	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	-1	True	AATAAA	-15	NA	42962531	42945947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962468
ES.30731.11	chr7	-	4130	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.5796007003133	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	-1	True	AATAAA	-15	NA	42962518	42945947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950674_42951034_42951162_42960454_42960675_42962468
ES.30731.12	chr7	-	4512	4	NIC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	8	-1	intron_retention	FALSE	canonical	3	60	junction_3	16.3095064303001	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	-1	True	AATAAA	-15	NA	42962663	42945947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42949601_42950593_42951162_42960454_42960610_42962527
ES.30731.13	chr7	-	4370	6	FSM	ENSMUSG00000012640.17	ENSMUST00000145622.8	4363	6	-8	1	-8	-1	multi-exon	FALSE	canonical	0	0	junction_3	40.2641279552904	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	-1	True	AATAAA	-15	NA	42962695	42945947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42957890_42957997_42960454_42960675_42962527
ES.30731.14	chr7	-	4616	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.0835065831322	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTGTTCATATTGCT	NA	False	NA	-2	True	AATAAA	-14	NA	42962522	42945948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962001
ES.30731.15	chr7	-	4161	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.615896985568	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTGTTCATATTGCT	NA	False	NA	-2	True	AATAAA	-14	NA	42962695	42945948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950690_42951071_42951162_42960454_42960610_42962527
ES.30731.16	chr7	-	4174	5	NIC	ENSMUSG00000012640.17	novel	705	5	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	40.0835065831322	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACTGTTCATATTGCT	NA	False	NA	-2	True	AATAAA	-14	NA	42962496	42945948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962417
ES.30731.17	chr7	-	4209	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.2619032625644	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCACTGTTCATATTGC	NA	False	NA	-3	True	AATAAA	-13	NA	42962696	42945949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950674_42951034_42951162_42960454_42960637_42962527
ES.30731.2	chr7	-	4528	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-17	-327	-9	1	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTTTGGGGACTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	42962696	42945619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ES.30731.20	chr7	-	4026	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.615896985568	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATTCACTGTTCATATT	NA	False	NA	-5	True	AATAAA	-11	NA	42962542	42945951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950674_42951034_42951162_42960454_42960610_42962527
ES.30731.21	chr7	-	3935	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	-36	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.615896985568	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCATCGTGCTCTGTAG	NA	False	NA	-109	True	NA	NA	NA	42962555	42946055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950674_42951034_42951162_42960454_42960610_42962527
ES.30731.22	chr7	-	3938	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-23	-174	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCATGTGGATCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	42962542	42946120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
ES.30731.23	chr7	-	3935	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	1	248	1	-248	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTATGTACATGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	42962678	42946194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ES.30731.3	chr7	-	4592	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	22	junction_4	30.589009464185	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTTTTGGGGACTGA	NA	False	NA	NA	False	AATAAA	-16	NA	42962696	42945620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
ES.30731.4	chr7	-	4274	5	NIC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-8	9	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	30.589009464185	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTGCTTTTTTCTTTTG	NA	False	NA	9	True	AATAAA	-25	NA	42962695	42945937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962527
ES.30731.5	chr7	-	4243	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	-54	-5	-15	5	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATATTGCTTTTTTCT	NA	False	NA	5	True	AATAAA	-21	NA	42962733	42945941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ES.30731.6	chr7	-	4142	5	FSM	ENSMUSG00000012640.17	ENSMUST00000139061.2	705	5	-6	-3431	-6	2	multi-exon	FALSE	canonical	2	2	junction_4	39.219733553404	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTCATATTGCTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	42962525	42945944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962417
ES.30731.7	chr7	-	4079	5	NNC	ENSMUSG00000012640.17	novel	4184	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.9323595904069	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962517	42945946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950690_42951034_42951160_42960454_42960610_42962468
ES.30731.9	chr7	-	4256	5	NNC	ENSMUSG00000012640.17	novel	4363	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.0835065831322	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTTCATATTGCTT	NA	False	NA	-1	True	AATAAA	-15	NA	42962694	42945947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960675_42962534
ES.30732.1	chr7	-	155	1	Intergenic	novelGene_25360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	42966613	42966458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42966500_42966600
ES.30733.1	chr7	-	189	1	Intergenic	novelGene_25361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGG	8376	False	NA	NA	False	NA	NA	NA	42972488	42972299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42972300_42972500
ES.30734.1	chr7	+	2831	1	Intergenic	novelGene_25362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGGACATGTGTGC	NA	False	NA	NA	False	AATAAA	-25	NA	42977744	42980575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_42977700_42980600
ES.30735.1	chr7	-	186	1	Intergenic	novelGene_25363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAAAAGAAGGAATGAGAT	NA	False	NA	NA	False	NA	NA	NA	42992365	42992179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_42992200_42992400
ES.30736.1	chr7	+	2491	9	NNC	ENSMUSG00000039013.17	novel	2570	9	NA	NA	-6274	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.63790805271381	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATTGTGCAGCAATTC	NA	False	NA	NA	False	AATAAA	-13	NA	42994490	43008893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_42994614_43001070_43001434_43001591_43001871_43002045_43002094_43004399_43004652_43004750_43005054_43005323_43005424_43005724_43005861_43008006
ES.30736.2	chr7	+	2539	9	NNC	ENSMUSG00000039013.17	novel	2570	9	NA	NA	-339	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.63790805271381	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGTGCAGCAATTCT	NA	False	NA	NA	False	AATAAA	-14	NA	43000425	43008894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43000596_43001070_43001434_43001591_43001871_43002045_43002094_43004399_43004652_43004750_43005054_43005323_43005424_43005724_43005861_43008006
ES.30737.1	chr7	+	2072	1	Intergenic	novelGene_25364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCCTCTGTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	43012037	43014109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_43012000_43014100
ES.30738.1	chr7	+	1588	2	FSM	ENSMUSG00000118553.2	ENSMUST00000239023.2	558	2	-27	-1003	-27	1003	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTTGTGTGGGTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	43077082	43079259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43077145_43077733
ES.30739.1	chr7	+	807	4	FSM	ENSMUSG00000004612.10	ENSMUST00000070518.4	881	4	71	3	14	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTATTGTTCCAAGAT	8508	False	NA	NA	False	AATAAA	-13	NA	43086567	43087670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43086885_43086960_43087108_43087198_43087334_43087462
ES.3074.1	chr10	+	2545	1	Intergenic	novelGene_2398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	71117195	71119740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71117200_71119700
ES.30740.1	chr7	+	881	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	-2	14	-2	3	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTTCCTCATTCTTT	1906	False	NA	38	True	AATAAA	-21	NA	43093504	43107210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
ES.30740.10	chr7	+	4926	13	Fusion	ENSMUSG00000070604.6_ENSMUSG00000004610.5	novel	3836	10	NA	NA	7	-3	intron_retention	FALSE	canonical	0	0	junction_4	824.796654232626	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCTAGTGCCTGCAA	1962	False	NA	NA	False	NA	NA	NA	43093560	43121440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43112560_43112697_43112783_43114524_43114644_43114930_43115789_43116045_43116850_43117130_43117377_43117675_43118079_43118194_43118383_43118539_43120224
ES.30740.11	chr7	+	4457	15	Fusion	ENSMUSG00000070604.6_ENSMUSG00000004610.5	novel	3836	10	NA	NA	8	0	multi-exon	FALSE	canonical	0	0	junction_7	875.135371452524	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTAGTGCCTGCAAAGG	1963	False	NA	NA	False	NA	NA	NA	43093561	43121443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43112560_43112697_43112783_43113600_43114229_43114524_43114644_43114930_43115789_43116045_43116850_43117130_43117377_43117675_43118079_43118194_43118383_43118539_43120224
ES.30740.12	chr7	+	3948	3	NIC	ENSMUSG00000004610.5	novel	701	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	1745	junction_1	163	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGCCTCTTTCCTCAT	1963	False	NA	33	True	AATAAA	-16	NA	43093561	43107205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43093629_43101764_43102382_43103941
ES.30740.13	chr7	+	1104	5	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	5	1	intron_retention	FALSE	canonical	3	1745	junction_1	130.32723238065	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTCTTTCCTCATTCT	1980	False	NA	36	True	AATAAA	-19	NA	43093578	43107208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43093629_43101764_43102382_43103941_43104005_43105902_43106062_43106993
ES.30740.14	chr7	+	7473	4	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	3366	-1	intron_retention	FALSE	canonical	3	1875	junction_3	86.9175854857155	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACTGCCTCTTTCCTC	5341	False	NA	31	True	AATAAA	-14	NA	43096939	43107203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43101924_43102222_43102382_43103941_43106062_43106993
ES.30740.15	chr7	+	2665	6	ISM	ENSMUSG00000070604.6	ENSMUST00000107977.4	3836	10	2865	4	302	-4	3prime_fragment	FALSE	canonical	2	8	junction_2	1.62480768092719	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGCTAGTGCCTGCA	NA	False	NA	NA	False	NA	NA	NA	43115439	43121439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43116045_43116850_43117130_43117377_43117675_43118079_43118194_43118383_43118539_43120224
ES.30740.16	chr7	+	3789	6	NIC	ENSMUSG00000070604.6	novel	3836	10	NA	NA	336	1255	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	3.76297754444536	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACCTGTCAGCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	43115473	43122698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43116045_43116850_43117130_43117478_43117675_43118079_43118194_43118383_43118539_43120224
ES.30740.2	chr7	+	4186	14	Fusion	ENSMUSG00000070604.6_ENSMUSG00000004610.5	novel	3836	10	NA	NA	3	-6	multi-exon	TRUE	canonical	0	0	junction_4	803.483812336248	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGTGCTAGTGCCTG	1947	False	NA	NA	False	NA	NA	NA	43093545	43121437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43112560_43112697_43112783_43113600_43114229_43114524_43114644_43114930_43115789_43116024_43116850_43117130_43117478_43117675_43118079_43118194_43118383_43118539_43120224
ES.30740.3	chr7	+	5515	12	Fusion	ENSMUSG00000070604.6_ENSMUSG00000004610.5	novel	3836	10	NA	NA	-1	-6	intron_retention	TRUE	canonical	0	0	junction_4	848.956043406467	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGTGCTAGTGCCTG	1954	False	NA	NA	False	NA	NA	NA	43093552	43121437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43112560_43112697_43112783_43114524_43114644_43114930_43115789_43116045_43116850_43117193_43117261_43118194_43118383_43118539_43120224
ES.30740.4	chr7	+	3660	4	ISM	ENSMUSG00000004610.5	ENSMUST00000206411.2	701	6	-21	-2	-1	0	intron_retention	FALSE	canonical	3	1745	junction_1	133.129844721443	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTCTTTCCTCATTC	1954	False	NA	35	True	AATAAA	-18	NA	43093552	43107207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941
ES.30740.5	chr7	+	886	6	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	781.133688941912	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACTGCCTCTTTCCTC	1955	False	NA	31	True	AATAAA	-14	NA	43093553	43107203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106932
ES.30740.6	chr7	+	2723	5	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1745	junction_1	116.056020955399	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACTGCCTCTTTCCTC	1955	False	NA	31	True	AATAAA	-14	NA	43093553	43107203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43106062_43106993
ES.30740.7	chr7	+	670	4	ISM	ENSMUSG00000004610.5	ENSMUST00000206196.2	551	5	2	1777	2	-1777	5prime_fragment	FALSE	canonical	3	1745	junction_1	133.129844721443	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTTGTAACAGCTTT	1957	False	NA	NA	False	NA	NA	NA	43093555	43104220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941
ES.30740.8	chr7	+	3023	4	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	2	1	intron_retention	FALSE	canonical	3	1745	junction_1	133.995024783261	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCCTCTTTCCTCATT	1957	False	NA	34	True	AATAAA	-17	NA	43093555	43107206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43093629_43101764_43102382_43103941_43106062_43106993
ES.30741.1	chr7	-	2863	3	Antisense	novelGene_ENSMUSG00000070604.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATTGGTTGACCAC	NA	False	NA	NA	False	NA	NA	NA	43116007	43110922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_43112465_43113504_43114522_43115703
ES.30741.2	chr7	-	1967	5	Antisense	novelGene_ENSMUSG00000070604.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAGTAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	43115004	43110956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_43111162_43111202_43112465_43113504_43113710_43114368_43114522_43114862
ES.30742.1	chr7	+	444	1	Intergenic	novelGene_25365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTGCACTGGGC	NA	False	NA	NA	False	NA	NA	NA	43205633	43206077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_43205600_43206100
ES.30743.1	chr7	+	3510	5	NNC	ENSMUSG00000056592.15	novel	3495	5	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.34520787991171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTATTGTACATTATTT	NA	False	NA	NA	False	TTTAAA	-2	NA	43211682	43224883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43211846_43214037_43214268_43216671_43216819_43217068_43217168_43222012
ES.30743.10	chr7	+	4716	4	NNC	ENSMUSG00000030469.11	novel	4494	4	NA	NA	0	226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0213499897497	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACCATGTATTTCTTGT	7267	False	NA	NA	False	NA	NA	NA	43229033	43242885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43229191_43233491_43233721_43235777_43235901_43238678
ES.30743.11	chr7	+	2681	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	110	1703	81	-1703	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTCAGTTGGTAAAATC	7377	False	NA	NA	False	AATGAA	-41	NA	43229143	43240956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ES.30743.12	chr7	+	3669	1	NIC	ENSMUSG00000030469.11	novel	4494	4	NA	NA	119	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAAGGGTAGGATTAC	7415	False	NA	NA	False	NA	NA	NA	43229181	43232850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43229200_43232800
ES.30743.13	chr7	+	3308	5	NNC	ENSMUSG00000030469.11	novel	4494	4	NA	NA	126	-1188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.5758369027902	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCCTGGCTGGATAGT	7422	False	NA	-1	True	NA	NA	NA	43229188	43241471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43229234_43233491_43233721_43234350_43234465_43235777_43235905_43238678
ES.30743.14	chr7	+	3197	4	NNC	ENSMUSG00000030469.11	novel	4494	4	NA	NA	126	-1185	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	12.4988888395018	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTGGATAGTAAT	7422	False	NA	2	True	NA	NA	NA	43229188	43241474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43229234_43233491_43233721_43235777_43235905_43238678
ES.30743.15	chr7	+	3151	3	ISM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	4456	1188	4427	-1188	3prime_fragment	FALSE	canonical	3	28	junction_2	0.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGCCTGGCTGGATAGT	NA	False	NA	-1	True	NA	NA	NA	43233489	43241471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43233721_43235777_43235905_43238678
ES.30743.16	chr7	+	3522	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-229	-931	-173	931	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGATACGAGTTTTTTTT	2663	False	NA	NA	False	NA	NA	NA	43256419	43268640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.17	chr7	+	2440	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	-78	0	-22	0	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACATTCATCCATTGC	2814	False	NA	7	True	AATAAA	-21	NA	43256570	43267709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.18	chr7	+	2466	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	-10	-5	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACCCACATTCATCC	2826	False	NA	2	True	AATAAA	-16	NA	43256582	43267704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.19	chr7	+	2216	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	6	-66	6	-3	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCCACATTCATCCAT	2842	False	NA	4	True	AATAAA	-18	NA	43256598	43267706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
ES.30743.2	chr7	+	3195	5	NNC	ENSMUSG00000056592.15	novel	3495	5	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.48746859276655	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTGTACATTATTTC	NA	False	NA	NA	False	TTTAAA	-3	NA	43211694	43224884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43211846_43214037_43214268_43216691_43216819_43217068_43217168_43222296
ES.30743.20	chr7	+	1924	2	NIC	ENSMUSG00000055102.16	novel	2156	4	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2844	False	NA	3	True	AATAAA	-11	NA	43256600	43267636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43256699_43265810
ES.30743.21	chr7	+	4456	5	NNC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.5398320783411	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATTTTAAATACAC	2846	False	NA	7	True	AATAAA	-15	NA	43256602	43267640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43258614_43259007_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.22	chr7	+	2318	4	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	11	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.0083324654586	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACCCACATTCATCC	2847	False	NA	2	True	AATAAA	-16	NA	43256603	43267704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43256742_43259209_43259403_43261970_43262064_43265810
ES.30743.23	chr7	+	4449	5	NNC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	17	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.5398320783411	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTAAATACACAAATT	2853	False	NA	12	True	AATAAA	-20	NA	43256609	43267645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43258620_43259018_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.24	chr7	+	2398	6	NNC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	37.0048645450838	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	2878	False	NA	3	True	AATAAA	-11	NA	43256634	43267636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43256742_43256882_43256935_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.25	chr7	+	3773	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	43	-1660	3	1591	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTATAGTTTTTATTT	2879	False	NA	NA	False	TATAAA	-7	NA	43256635	43269300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
ES.30743.26	chr7	+	3173	5	NIC	ENSMUSG00000055102.16	novel	1824	4	NA	NA	71	839	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAAGTCTCTCTGTAGT	2963	False	NA	NA	False	CATAAA	-21	NA	43256719	43268548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.27	chr7	+	2307	5	NNC	ENSMUSG00000055102.16	novel	1824	4	NA	NA	218	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.1421660121323	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGCTTATTTTAAAT	3110	False	NA	3	True	AATAAA	-11	NA	43256866	43267636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43256935_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.28	chr7	+	2434	5	NNC	ENSMUSG00000055102.16	novel	1824	4	NA	NA	994	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.3494752582406	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCCACATTCATCCAT	3886	False	NA	4	True	AATAAA	-18	NA	43257642	43267706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43257768_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ES.30743.29	chr7	+	3316	6	Fusion	ENSMUSG00000055102.16_ENSMUSG00000030472.10	novel	2362	5	NA	NA	2081	-6684	multi-exon	FALSE	canonical	0	0	junction_3	37.7433437840369	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCAGCGAGTTGGTTTG	7655	False	NA	NA	False	NA	NA	NA	43261411	43292035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_43261534_43261970_43262064_43265810_43267492_43286184_43286535_43288656_43288930_43291238
ES.30743.3	chr7	+	3444	5	FSM	ENSMUSG00000056592.15	ENSMUST00000107972.8	3495	5	50	1	50	-1	multi-exon	FALSE	canonical	1	5	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTGTACATTATTTC	NA	False	NA	NA	False	TTTAAA	-3	NA	43211729	43224884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43211846_43214037_43214268_43216691_43216819_43217068_43217168_43222012
ES.30743.30	chr7	+	1924	2	ISM	ENSMUSG00000055102.16	ENSMUST00000116324.3	1824	4	2639	-298	2639	0	3prime_fragment	FALSE	canonical	3	94	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATTTTAAATACAC	8213	False	NA	7	True	AATAAA	-15	NA	43261969	43267640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43262064_43265810
ES.30743.31	chr7	+	1269	5	NNC	ENSMUSG00000030472.10	novel	1970	6	NA	NA	-10735	-383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.11803398874989	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTGTCAGTTGCTT	5720	False	NA	NA	False	AATGAA	-17	NA	43273395	43298336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43273468_43286184_43286531_43291238_43291515_43294896_43295035_43297899
ES.30743.4	chr7	+	3088	4	NNC	ENSMUSG00000056592.15	novel	2664	4	NA	NA	2500	47926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.62466929133727	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGTGGAAGGTATTTTT	2671	False	NA	NA	False	TTTAAA	-9	NA	43216707	43272811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43216819_43217068_43217168_43222012_43224871_43272791
ES.30743.5	chr7	+	3167	3	FSM	ENSMUSG00000030469.11	ENSMUST00000205769.2	596	3	-95	-2476	-86	-1184	multi-exon	FALSE	canonical	0	0	junction_1	14	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	7181	False	NA	3	True	NA	NA	NA	43228947	43241475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43235777_43235905_43238678
ES.30743.6	chr7	+	3396	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-86	1184	-86	-1184	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGGCTGGATAGTAATA	7181	False	NA	3	True	NA	NA	NA	43228947	43241475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ES.30743.7	chr7	+	3190	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-65	1369	-65	-1369	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATATTGTTTTTTGTTT	7202	False	NA	NA	False	NA	NA	NA	43228968	43241290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ES.30743.8	chr7	+	4306	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-25	213	-25	-213	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATATTTTCTTCCTTGGGT	7242	False	NA	NA	False	NA	NA	NA	43229008	43242446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ES.30743.9	chr7	+	6154	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	-3	-1657	-3	1657	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCTGTTGTGGTTAATC	7264	False	NA	NA	False	NA	NA	NA	43229030	43244316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ES.30744.1	chr7	-	4647	2	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTGACTTAGAATTC	NA	False	NA	NA	False	AATAAA	-16	NA	43296507	43289383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_43289572_43292048
ES.30744.2	chr7	-	5404	1	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTCTTGTGTACTAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	43296499	43291095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_43291100_43296500
ES.30744.3	chr7	-	2105	1	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCAGCACACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	43296531	43294426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_43294400_43296500
ES.30745.1	chr7	-	182	1	Intergenic	novelGene_25366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATCTGTGTTA	1067	False	NA	NA	False	NA	NA	NA	43312192	43312010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_43312000_43312200
ES.30746.1	chr7	-	1135	3	NNC	ENSMUSG00000108783.2	novel	230	2	NA	NA	-572	1501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGGCAATTTCTCAATT	NA	False	NA	NA	False	NA	NA	NA	43321310	43318763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_43319049_43320216_43320329_43320572
ES.30747.1	chr7	+	2486	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	-9	-2	-9	2	multi-exon	FALSE	canonical	3	64	junction_1	1	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGGTCTGGTGTTTT	NA	False	NA	10	True	NA	NA	NA	43321430	43327724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43321500_43324527_43325071_43325850
ES.30747.2	chr7	+	5505	2	NIC	ENSMUSG00000038888.9	novel	2475	3	NA	NA	0	2	intron_retention	FALSE	canonical	3	66	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGGTCTGGTGTTTT	NA	False	NA	10	True	NA	NA	NA	43321439	43327724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43325071_43325850
ES.30747.3	chr7	+	1923	2	NIC	ENSMUSG00000038888.9	novel	2475	3	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTTTTTGGTCTGGT	NA	False	NA	5	True	NA	NA	NA	43321445	43327719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43321500_43325850
ES.30748.1	chr7	+	1223	6	NNC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	-179	-778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.3180546393536	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCTACTGTGCCTCTC	NA	False	NA	10	True	AATAAA	-23	NA	43361811	43376180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362129_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ES.30748.10	chr7	+	1730	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-267	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.6723688902848	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCCTTTTTTTGTTTTG	NA	False	NA	11	True	CATAAA	-15	NA	43362555	43376952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370791_43370961_43373143_43373316_43375974
ES.30748.11	chr7	+	4122	4	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-260	-14	intron_retention	FALSE	canonical	3	19	junction_1	23.3428552000155	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCTTGCTTCCTTTTT	NA	False	NA	3	True	CATAAA	-7	NA	43362562	43376944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363202_43363307_43370390_43373316_43375974
ES.30748.12	chr7	+	3636	2	NIC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	5492	-789	intron_retention	FALSE	canonical	3	75	junction_1	0	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCGCCTCCCTCCCCTA	NA	False	NA	-1	True	AATAAA	-12	NA	43369874	43376169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43373316_43375974
ES.30748.2	chr7	+	1767	5	NIC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	-52	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	27.4988636128841	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTTTGTTTTGTTT	NA	False	NA	14	True	CATAAA	-18	NA	43361938	43376955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43362129_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ES.30748.3	chr7	+	834	5	NNC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	6	-778	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	31.5386667441729	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCTACTGTGCCTCTC	NA	False	NA	10	True	AATAAA	-23	NA	43361996	43376180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362129_43370390_43370581_43370791_43370961_43373178_43373316_43375974
ES.30748.4	chr7	+	976	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-314	-772	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	23.4810561943027	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGCCTCTCTCACTG	NA	False	NA	16	True	AATAAA	-29	NA	43362508	43376186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370791_43370961_43373178_43373316_43375974
ES.30748.5	chr7	+	860	5	NNC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	-298	-781	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	32.1121083082379	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCCTACTGTGCCT	NA	False	NA	7	True	AATAAA	-20	NA	43362524	43376177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43370390_43370581_43370791_43370961_43373178_43373316_43375974
ES.30748.6	chr7	+	1854	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-275	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.9666460650931	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTTTTTGTTTTGTTT	NA	False	NA	14	True	CATAAA	-18	NA	43362547	43376955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373143_43373316_43375974
ES.30748.7	chr7	+	1820	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-275	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTGTTTTGTTTT	NA	False	NA	15	True	CATAAA	-19	NA	43362547	43376956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ES.30748.8	chr7	+	3676	4	NNC	ENSMUSG00000054046.8	novel	1809	6	NA	NA	-274	-780	intron_retention	FALSE	canonical	3	13	junction_2	26.0426999794995	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCCCTACTGTGCCTC	NA	False	NA	8	True	AATAAA	-21	NA	43362548	43376178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43363307_43370390_43370581_43370791_43373316_43375974
ES.30748.9	chr7	+	1049	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-274	-772	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGCCTCTCTCACTG	NA	False	NA	16	True	AATAAA	-29	NA	43362548	43376186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
ES.30749.1	chr7	+	1740	4	NIC	ENSMUSG00000067616.12	novel	1312	6	NA	NA	-12	2	intron_retention	FALSE	canonical	1	1	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTCTGTTGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	43424015	43428684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43424226_43425903_43425979_43426911_43427891_43428208
ES.30749.2	chr7	+	1900	5	NIC	ENSMUSG00000067616.12	novel	915	5	NA	NA	-11	2	intron_retention	FALSE	canonical	1	2	junction_3	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTCTGTTGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	43424016	43428684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43424226_43425903_43425979_43426304_43426466_43426911_43427891_43428208
ES.30749.3	chr7	+	2669	3	NIC	ENSMUSG00000067616.12	novel	1312	6	NA	NA	-10	0	intron_retention	FALSE	canonical	2	6	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGATTCTGTTGAGTG	NA	False	NA	NA	False	NA	NA	NA	43424017	43428682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43424226_43425903_43427891_43428208
ES.3075.1	chr10	-	1456	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	-25	0	-25	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121117	71090809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ES.3075.2	chr10	-	5062	5	NIC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	24	0	intron_retention	FALSE	canonical	3	135	junction_2	4.7169905660283	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121024	71090809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_71091705_71092444_71092539_71094030_71097946_71098028_71098093_71120930
ES.3075.3	chr10	-	1534	8	NNC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	62.9936828708455	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTCTTGACTACTTAAT	NA	False	NA	-3	True	AATAAA	-15	NA	71121065	71090812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71099414_71099548_71120930
ES.3075.4	chr10	-	4203	7	NNC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	24	-3	intron_retention	FALSE	canonical	0	0	junction_3	70.4383102832227	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTCTTGACTACTTAAT	NA	False	NA	-3	True	AATAAA	-15	NA	71121024	71090812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71091705_71092444_71092539_71094030_71094137_71094687_71094821_71095571_71097946_71098028_71098539_71120930
ES.3075.6	chr10	-	3606	6	NIC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	41	-4	intron_retention	FALSE	canonical	3	135	junction_2	4.75815090134813	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGTCTTGACTACTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	71121007	71090813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71097946_71098028_71098093_71120930
ES.3075.7	chr10	-	1485	7	NNC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.1308656892478	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCGTCTTGACTACTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	71121018	71090813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71091705_71092444_71092539_71094030_71094269_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ES.30750.1	chr7	+	1448	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	-70	-5	-70	5	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGCCTCTGTCTG	285	False	NA	14	True	ATTAAA	-21	NA	43430388	43434839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ES.30750.2	chr7	+	1329	5	ISM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	390	6	390	-6	3prime_fragment	FALSE	canonical	2	31	junction_3	16.2230545829076	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCTCCAATGTGTGT	745	False	NA	3	True	ATTAAA	-10	NA	43430848	43434828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ES.30750.3	chr7	+	1172	4	ISM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	1662	1	1662	-1	3prime_fragment	FALSE	canonical	2	31	junction_2	18.6726180988812	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCAATGTGTGTGCCTC	32	False	NA	8	True	ATTAAA	-15	NA	43432120	43434833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43432344_43432880_43433156_43433739_43433874_43434293
ES.30751.1	chr7	+	4184	4	NIC	ENSMUSG00000064023.5	novel	745	6	NA	NA	-26	0	intron_retention	FALSE	canonical	3	8	junction_1	12.0277457017791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	2851	False	NA	28	True	AATAAA	-18	NA	43446974	43453246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43447072_43447478_43448208_43448488_43451638_43453037
ES.30751.2	chr7	+	855	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	467	0	448	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3344	False	NA	28	True	AATAAA	-18	NA	43447467	43453246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
ES.30751.3	chr7	+	3568	4	NIC	ENSMUSG00000064023.5	novel	1322	5	NA	NA	487	0	intron_retention	FALSE	canonical	3	33	junction_3	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3383	False	NA	28	True	AATAAA	-18	NA	43447506	43453246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43447557_43448047_43448208_43448488_43451638_43453037
ES.30752.1	chr7	+	159	1	Intergenic	novelGene_25367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAGTAATATAGAAA	NA	False	NA	NA	False	NA	NA	NA	43524802	43524961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_43524800_43525000
ES.30753.1	chr7	+	186	1	Intergenic	novelGene_25368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAGAACTGTCCTAG	4908	False	NA	NA	False	TTTAAA	-9	NA	43572522	43572708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_43572500_43572700
ES.30754.1	chr7	+	871	3	ISM	ENSMUSG00000055193.5	ENSMUST00000068625.5	845	5	4747	-394	4694	394	3prime_fragment	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCATTTTAGATCATTT	7829	False	NA	NA	False	NA	NA	NA	43587910	43589457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43588049_43588168_43588306_43588861
ES.30755.1	chr7	-	173	1	Intergenic	novelGene_25369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGACAGAAATT	NA	False	NA	NA	False	NA	NA	NA	43696032	43695859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_43695900_43696000
ES.30756.1	chr7	+	5858	1	Antisense	novelGene_ENSMUSG00000108774.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATAAGTTCTGTGACT	7919	False	NA	NA	False	NA	NA	NA	43805978	43811836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_43806000_43811800
ES.30757.1	chr7	+	1014	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	-61	1	-61	-1	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAAGTTCTGACATTCT	NA	False	NA	6	True	AATAAA	-20	NA	43874722	43879041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
ES.30757.2	chr7	+	1873	3	NIC	ENSMUSG00000063903.6	novel	954	5	NA	NA	15	-9	intron_retention	FALSE	canonical	3	34	junction_1	23	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATGAGTTCAAGTTCT	NA	False	NA	-2	True	AATAAA	-12	NA	43874798	43879033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43874949_43876944_43878472_43878837
ES.30757.3	chr7	+	1255	4	ISM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	59	6	-19	-6	intron_retention	FALSE	canonical	3	34	junction_1	15.7973274814304	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTCAAGTTCTGAC	NA	False	NA	1	True	AATAAA	-15	NA	43874842	43879036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334
ES.30758.1	chr7	-	5055	2	Fusion	ENSMUSG00000038782.8_ENSMUSG00000062073.7	novel	1078	4	NA	NA	432	0	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTCAGTGTCTGACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	43885096	43870440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_43871149_43880749
ES.30758.2	chr7	-	1135	4	NIC	ENSMUSG00000038782.8	novel	1306	5	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTCAGTATCTGACT	NA	False	NA	NA	False	AATAAA	-16	NA	43896084	43879356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_43880066_43880749_43880897_43881779_43881981_43896006
ES.30758.3	chr7	-	1076	4	NNC	ENSMUSG00000038782.8	novel	1306	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.62466929133727	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTCAGTATCTGACT	NA	False	NA	NA	False	AATAAA	-16	NA	43896119	43879356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_43880066_43880749_43880897_43881779_43881887_43896006
ES.30759.1	chr7	+	3409	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	-66	-7	1	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896146	43901743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.10	chr7	+	1922	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	58	2	-7	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896203	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.11	chr7	+	5010	3	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	709	junction_1	5.5	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896208	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43899484_43899732_43899765_43900036
ES.30759.12	chr7	+	2915	6	NIC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	-2	1	intron_retention	FALSE	canonical	3	44	junction_1	283.6311689501	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTGTGCTGTTTGATT	NA	False	NA	21	True	ATTAAA	-21	NA	43896208	43901740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896661_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.13	chr7	+	2096	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	-2	-2	-2	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896208	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.14	chr7	+	3235	6	NNC	ENSMUSG00000045411.17	novel	676	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_1	351.347691041225	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTAGGGTGTGCTGTT	NA	False	NA	16	True	ATTAAA	-16	NA	43896208	43901735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.15	chr7	+	1906	5	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	365.118045979653	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896209	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899505_43900016
ES.30759.16	chr7	+	2218	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	340.047415661344	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896209	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.17	chr7	+	5533	1	FSM	ENSMUSG00000045411.17	ENSMUST00000144905.3	1966	1	-1	-3566	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	861	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896209	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896200_43901700
ES.30759.18	chr7	+	2049	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-13	-1360	-1	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896209	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.2	chr7	+	2210	7	NNC	ENSMUSG00000045411.17	novel	759	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	327.553897176565	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896150	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43896674_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.20	chr7	+	4862	3	FSM	ENSMUSG00000045411.17	ENSMUST00000071296.11	4201	3	-655	-6	0	1	multi-exon	FALSE	canonical	3	709	junction_2	56.5	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896210	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43899024_43899444_43899484_43899732
ES.30759.21	chr7	+	3169	5	NIC	ENSMUSG00000045411.17	novel	2908	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	316.60108970122	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896210	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896674_43897720_43898965_43899024_43899444_43899484_43899732
ES.30759.22	chr7	+	2230	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896210	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.23	chr7	+	4589	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	709	junction_2	50.8745734352852	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896210	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.24	chr7	+	2232	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	0	-1244	0	1	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896210	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.25	chr7	+	2737	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	330.342961514578	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896210	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43897488_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.26	chr7	+	2245	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896210	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.27	chr7	+	2106	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	329.564696059649	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896210	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43896841_43897658_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.28	chr7	+	1849	5	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	311.271987175203	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTAGGGTGTGCTG	NA	False	NA	14	True	ATTAAA	-14	NA	43896210	43901733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43897675_43897720_43899444_43899484_43899732_43899765_43900036
ES.30759.3	chr7	+	2286	5	NNC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	384.86036428814	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896152	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43897333_43897720_43898965_43899024_43899444_43899484_43900016
ES.30759.30	chr7	+	3840	4	NIC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	44	junction_1	333.39599411044	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTAGGGTGTGCTGTT	NA	False	NA	16	True	ATTAAA	-16	NA	43896210	43901735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896661_43896841_43897675_43899024_43899444
ES.30759.31	chr7	+	3430	5	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	79	junction_1	294.015730871666	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.32	chr7	+	2149	7	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	361.588931738176	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGGGTGTGCTGTTTGA	NA	False	NA	19	True	ATTAAA	-19	NA	43896211	43901738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.33	chr7	+	2984	6	NNC	ENSMUSG00000045411.17	novel	2908	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	30	junction_1	343.507205164608	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896211	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43896674_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.34	chr7	+	2063	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	34	-1338	1	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.35	chr7	+	2081	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896211	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.36	chr7	+	2062	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	349.374997515404	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.37	chr7	+	3579	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	217	junction_1	234.566740088094	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43897675_43899484_43899732_43899765_43900036
ES.30759.38	chr7	+	2181	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_3	313.179084373285	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.39	chr7	+	2721	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	341.25487379507	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896674_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.4	chr7	+	2715	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_2	315.509508573038	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896154	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.40	chr7	+	3560	5	NIC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	379.680786977693	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTAGGGTGTGCTGT	NA	False	NA	15	True	ATTAAA	-15	NA	43896211	43901734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43897333_43897484_43897675_43899024_43899444_43899484_43899732
ES.30759.41	chr7	+	2244	8	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	354.95420802678	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896211	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43896847_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.42	chr7	+	3363	5	NNC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	329.48065193574	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896211	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900016
ES.30759.43	chr7	+	2094	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	53	-16	1	14	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGTTCCGGCGTGGGTA	NA	False	NA	38	True	ATTAAA	-38	NA	43896211	43901757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.44	chr7	+	3151	6	NIC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896211	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.45	chr7	+	2135	7	NNC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	361.074053654125	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43897333_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.46	chr7	+	2164	7	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	324.736303278008	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.47	chr7	+	2329	8	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	331.480537797886	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.48	chr7	+	2232	8	NNC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	363.743181435496	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896233_43896661_43896847_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.49	chr7	+	4391	5	NIC	ENSMUSG00000045411.17	novel	676	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	327.877549551658	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896211	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43897484_43897675_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.5	chr7	+	3903	3	NIC	ENSMUSG00000045411.17	novel	367	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	217	junction_1	246	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896161	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43897675_43899484_43899732
ES.30759.52	chr7	+	4677	3	NIC	ENSMUSG00000045411.17	novel	2908	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	54	junction_1	384	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896211	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896674_43899024_43899444
ES.30759.53	chr7	+	2719	7	NIC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	343.477154342986	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896661_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.54	chr7	+	3589	4	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	720	junction_3	45.3308822866806	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43897720_43898965_43899024_43899444_43899765_43900036
ES.30759.55	chr7	+	2000	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.56	chr7	+	5105	2	FSM	ENSMUSG00000080352.3_ENSMUSG00000045411.17	ENSMUST00000188382.2	2301	2	-2806	2	1	0	multi-exon	FALSE	canonical	3	822	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896211	43901737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43899024_43899444
ES.30759.57	chr7	+	2989	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	360.089186483324	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896661_43897720_43898658_43898722_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.58	chr7	+	4832	3	NIC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	720	junction_2	51	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896211	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43899024_43899444_43899765_43900036
ES.30759.59	chr7	+	3153	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	-1	184	1	-184	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTCCCCGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43896211	43901552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.6	chr7	+	3664	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	-48	-6	4	1	multi-exon	FALSE	canonical	3	709	junction_3	48.6095555306659	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896162	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
ES.30759.60	chr7	+	3864	3	ISM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	1	-6	1	1	intron_retention	FALSE	canonical	3	733	junction_1	44.5	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896211	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43897720_43898965_43899024_43899444
ES.30759.61	chr7	+	3488	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	367.994891268887	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897720_43898325_43898474_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.62	chr7	+	2928	6	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	105	junction_1	259.497514438963	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896661_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.64	chr7	+	3415	5	NIC	ENSMUSG00000045411.17	novel	970	6	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	329.48065193574	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTAGGGTGTGCTGT	NA	False	NA	15	True	ATTAAA	-15	NA	43896211	43901734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732
ES.30759.65	chr7	+	3298	7	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	375.733356990773	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896211	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897484_43897675_43897720_43898325_43898474_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.67	chr7	+	3403	6	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	368.23666303072	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896211	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897720_43898658_43898722_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.68	chr7	+	4152	5	NIC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	44	junction_1	309.008393898936	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTAGGGTGTGCTGT	NA	False	NA	15	True	ATTAAA	-15	NA	43896211	43901734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896661_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.69	chr7	+	4369	5	NIC	ENSMUSG00000045411.17	novel	676	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	349.932404186866	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896212	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896233_43896674_43897484_43897675_43899484_43899732_43899765_43900036
ES.30759.7	chr7	+	5323	2	ISM	ENSMUSG00000080352.3_ENSMUSG00000045411.17	ENSMUST00000186606.2	748	3	-3218	-687	-7	1	intron_retention	FALSE	canonical	3	709	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896170	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43899484_43899732
ES.30759.70	chr7	+	2164	7	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	322.760316988043	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896215	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.71	chr7	+	2013	6	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	313.091679863902	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896215	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43899444_43899484_43899732_43899765_43900036
ES.30759.72	chr7	+	5246	2	NIC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	720	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTAGGGTGTGCTGT	NA	False	NA	15	True	ATTAAA	-15	NA	43896216	43901734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43899765_43900036
ES.30759.73	chr7	+	2122	8	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	369.893807154741	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	False	NA	23	True	ATTAAA	-23	NA	43896217	43901742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898658_43898722_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.74	chr7	+	2486	6	ISM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	74	0	1	0	3prime_fragment	FALSE	canonical	3	218	junction_1	214.949854617304	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896232	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.75	chr7	+	2386	8	NNC	ENSMUSG00000045411.17	novel	970	6	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	343.498685497886	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896287	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896472_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.76	chr7	+	3778	4	NNC	ENSMUSG00000045411.17	novel	3610	4	NA	NA	113	0	intron_retention	FALSE	canonical	0	0	junction_2	386.08807285385	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896354	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897720_43898658_43898722_43898965_43899024_43899444
ES.30759.77	chr7	+	1990	6	NNC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	293.138465575571	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896357	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896472_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.78	chr7	+	2247	7	NNC	ENSMUSG00000045411.17	novel	872	5	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	331.47083833524	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896367	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43896472_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.79	chr7	+	2443	6	NNC	ENSMUSG00000045411.17	novel	676	7	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	371.622066083272	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896933	43901736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900016
ES.30759.8	chr7	+	2453	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	54	junction_1	300.759455379212	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896178	43901739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_43896248_43896674_43896841_43897333_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.30759.9	chr7	+	1927	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	32	-1175	6	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	False	NA	22	True	ATTAAA	-22	NA	43896183	43901741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ES.3076.1	chr10	+	249	1	Intergenic	novelGene_2399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	275	False	NA	NA	False	NA	NA	NA	71131825	71132074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71131800_71132100
ES.30760.1	chr7	-	1555	1	FSM	ENSMUSG00000108705.2	ENSMUST00000205454.2	928	1	654	-1281	654	1281	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAGTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	43917486	43915931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_43915900_43917500
ES.30761.1	chr7	-	178	1	Intergenic	novelGene_25370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43939015	43938837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_43938800_43939000
ES.30762.1	chr7	-	632	1	ISM	ENSMUSG00000004473.11	ENSMUST00000004587.11	2978	4	2016	1568	2016	-1568	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGAAGTTGTCCTAG	NA	False	NA	NA	False	CATAAA	-13	NA	43954310	43953678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_43953700_43954300
ES.30763.1	chr7	+	4217	9	NNC	ENSMUSG00000038738.16	novel	6649	23	NA	NA	-11	-2140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5612494995996	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGAAGGTGTGCGTGGT	3796	False	NA	NA	False	NA	NA	NA	43991547	44004621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43991605_43991848_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44004171
ES.30763.2	chr7	+	4161	8	NNC	ENSMUSG00000038738.16	novel	6649	23	NA	NA	-11	-2533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.67819144635296	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAATGGCTACATGTG	3796	False	NA	NA	False	NA	NA	NA	43991547	44004228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43994228_43994322_43994442_44000371_44000469_44000980
ES.30763.3	chr7	+	3927	9	ISM	ENSMUSG00000038738.16	ENSMUST00000107934.2	6477	23	29446	2533	18	-2533	internal_fragment	FALSE	canonical	0	0	junction_1	1.45236875482778	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAATGGCTACATGTG	3825	False	NA	NA	False	NA	NA	NA	43991576	44004228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993721_43993746_43993929_43993999_43994322_43994442_44000371_44000469_44000980
ES.30763.4	chr7	+	5609	4	NNC	ENSMUSG00000038738.16	novel	6649	23	NA	NA	-303	-480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGGCCCCGCCTCCTTC	968	False	NA	15	True	ATTAAA	-21	NA	43999882	44009516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44000469_44000980_44004069_44004171_44006009_44009418
ES.30764.1	chr7	+	2822	1	Intergenic	novelGene_25371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCACTCCTCAATAGC	2690	False	NA	NA	False	NA	NA	NA	44018983	44021805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44019000_44021800
ES.30765.1	chr7	-	1291	1	Antisense	novelGene_ENSMUSG00000038738.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAAAAAAAAG	7456	False	NA	NA	False	NA	NA	NA	44008661	44007370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_44007400_44008700
ES.30766.1	chr7	-	1242	5	NNC	ENSMUSG00000008028.16	novel	913	6	NA	NA	2	3	intron_retention	FALSE	canonical	0	0	junction_2	11.3468057179102	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTCGGCAAAGTCGT	NA	False	NA	NA	False	TATAAA	-22	NA	44024452	44009463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44009806_44010473_44010608_44011917_44012440_44023746_44023949_44024410
ES.30766.2	chr7	-	2633	4	NNC	ENSMUSG00000008028.16	novel	913	6	NA	NA	19	0	intron_retention	FALSE	canonical	1	2	junction_1	6.18241233033047	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCTCTCGGCAAAGT	NA	False	NA	NA	False	TATAAA	-19	NA	44024435	44009466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44009907_44010473_44012440_44023746_44023949_44024410
ES.30766.3	chr7	-	1060	5	NIC	ENSMUSG00000008028.16	novel	913	6	NA	NA	19	-4	intron_retention	FALSE	canonical	2	14	junction_4	7.66485485837795	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTTCTCTCGGCA	NA	False	NA	NA	False	TATAAA	-15	NA	44024435	44009470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746_44023949_44024410
ES.30766.4	chr7	-	2754	2	ISM	ENSMUSG00000008028.16	ENSMUST00000150886.2	820	5	10132	-190	10132	-4	intron_retention	FALSE	canonical	3	32	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTTCTCTCGGCA	3225	False	NA	NA	False	TATAAA	-15	NA	44012892	44009470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44009806_44010473
ES.30766.5	chr7	-	1190	5	NNC	ENSMUSG00000008028.16	novel	913	6	NA	NA	225	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.0701077045733	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTTCTCTCGGCA	NA	False	NA	NA	False	TATAAA	-15	NA	44024229	44009470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44009806_44010473_44010608_44012075_44012197_44012322_44012440_44023746
ES.30766.6	chr7	-	890	6	FSM	ENSMUSG00000008028.16	ENSMUST00000107933.8	913	6	19	4	19	-4	multi-exon	FALSE	canonical	2	11	junction_3	8.25590697622012	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTTCTCTCGGCA	NA	False	NA	NA	False	TATAAA	-15	NA	44024435	44009470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44009806_44010473_44010608_44012075_44012197_44012366_44012440_44023746_44023949_44024410
ES.30766.7	chr7	-	1520	4	FSM	ENSMUSG00000008028.16	ENSMUST00000137946.2	973	4	-497	-50	19	-6	multi-exon	FALSE	canonical	3	16	junction_3	6.79869268479038	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCCATTTCTCTCGG	NA	False	NA	NA	False	TATAAA	-13	NA	44024435	44009472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746
ES.30766.8	chr7	-	171	1	Antisense	novelGene_ENSMUSG00000108509.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTCTGGTGCA	3256	False	NA	NA	False	NA	NA	NA	44012861	44012690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_44012700_44012900
ES.30767.1	chr7	-	177	1	Intergenic	novelGene_25372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44026107	44025930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44025900_44026100
ES.30768.1	chr7	+	162	1	Intergenic	novelGene_25373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAAAATCTTTTT	5341	False	NA	NA	False	NA	NA	NA	44026148	44026310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44026100_44026300
ES.30769.1	chr7	+	2497	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	-3	0	-3	0	multi-exon	FALSE	canonical	2	9	junction_1	3.88458491991101	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44033522	44049453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44033601_44034229_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.30769.2	chr7	+	3060	10	NNC	ENSMUSG00000030731.14	novel	2494	11	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	6.48264539813992	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44033553	44049453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44033601_44034229_44035265_44040050_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.30769.3	chr7	+	2581	10	ISM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	542	0	40	0	3prime_fragment	FALSE	canonical	2	10	junction_3	3.29983164553722	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44034067	44049453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.30769.4	chr7	+	2660	11	NNC	ENSMUSG00000030731.14	novel	2494	11	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.43034319530397	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44034077	44049453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44034374_44034636_44034721_44035374_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.30769.5	chr7	+	2523	10	ISM	ENSMUSG00000030731.14	ENSMUST00000118831.8	2627	11	575	158	125	0	3prime_fragment	FALSE	canonical	0	0	junction_1	6.17841723309238	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44034152	44049453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44034374_44035352_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.30769.6	chr7	+	5155	8	NIC	ENSMUSG00000030731.14	novel	2096	10	NA	NA	51	1	intron_retention	FALSE	canonical	2	10	junction_2	3.23879544250132	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACCTGTCTCCCTGGGG	NA	False	NA	17	True	AATAAA	-19	NA	44034342	44049454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44035546_44039919_44040449_44041822_44042196_44042772_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ES.3077.1	chr10	+	166	1	Intergenic	novelGene_2400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCAAATCGTGTCA	7410	False	NA	NA	False	NA	NA	NA	71138960	71139126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71139000_71139100
ES.30770.1	chr7	-	178	1	Intergenic	novelGene_25374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGTAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	44074103	44073925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44073900_44074100
ES.30771.1	chr7	+	1108	6	FSM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	-142	-44	-50	3	multi-exon	FALSE	canonical	3	11	junction_1	23.6016948543955	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTCCTGGGGATTGCTC	4692	False	NA	37	True	AATAAA	-29	NA	44117353	44121089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ES.30771.2	chr7	+	920	6	NIC	ENSMUSG00000038695.14	novel	922	6	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.8580741742304	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCAGCTCCTGGGGATT	4822	False	NA	33	True	AATAAA	-25	NA	44117483	44121085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44117615_44117783_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ES.30771.3	chr7	+	2831	4	NNC	ENSMUSG00000038695.14	novel	1128	6	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_2	30.2140511829991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGCCTGGGCTCAGC	4826	False	NA	22	True	AATAAA	-14	NA	44117487	44121074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44117615_44118230_44119723_44119755_44120732_44120838
ES.30771.4	chr7	+	2852	3	NIC	ENSMUSG00000038695.14	novel	930	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	4	junction_1	35	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTTGTGCCTGGGCTC	4832	False	NA	19	True	AATAAA	-11	NA	44117493	44121071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44117615_44118233_44120732_44120838
ES.30771.5	chr7	+	841	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	26	-3	-1	0	multi-exon	FALSE	canonical	3	36	junction_1	14.4460202131937	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	4833	False	NA	23	True	AATAAA	-15	NA	44117494	44121075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ES.30771.6	chr7	+	1694	6	NIC	ENSMUSG00000038695.14	novel	922	6	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_3	29.1382909588054	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	4841	False	NA	23	True	AATAAA	-15	NA	44117502	44121075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44117615_44117783_44117842_44118230_44118394_44119032_44119962_44120536_44120732_44120838
ES.30771.7	chr7	+	1067	5	NIC	ENSMUSG00000038695.14	novel	1128	6	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_3	26.2678510731274	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	4861	False	NA	23	True	AATAAA	-15	NA	44117522	44121075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44117615_44118230_44118394_44119835_44119962_44120282_44120732_44120838
ES.30771.8	chr7	+	1040	5	NIC	ENSMUSG00000038695.14	novel	922	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_1	21.4869146226256	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	4861	False	NA	23	True	AATAAA	-15	NA	44117522	44121075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ES.30771.9	chr7	+	3541	1	FSM	ENSMUSG00000098661.3	ENSMUST00000184821.3	65	1	-2235	-1241	-2235	1241	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	4874	False	NA	24	True	AATAAA	-16	NA	44117535	44121076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44117500_44121100
ES.30772.1	chr7	+	1899	1	Intergenic	novelGene_25375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTACTTTGTGGCTACT	2	True	NA	NA	False	NA	NA	NA	44137278	44139177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44137300_44139200
ES.30773.1	chr7	-	3893	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	73	-2111	-12	2110	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGTGTAGCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	44145864	44137250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.10	chr7	-	2581	6	FSM	ENSMUSG00000008140.19	ENSMUST00000150342.2	992	6	22	-1611	-13	-13	multi-exon	FALSE	canonical	3	981	junction_1	39.9579779268171	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145865	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.11	chr7	-	1885	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	13	-13	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145874	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.12	chr7	-	1391	5	NIC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	10	-13	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	399.170702832761	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145842	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44145679
ES.30773.13	chr7	-	3363	3	ISM	ENSMUSG00000008140.19	ENSMUST00000150342.2	992	6	2654	-1611	-1791	-13	intron_retention	FALSE	canonical	3	981	junction_1	3.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44143233	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44141473_44141567_44141750_44141977
ES.30773.14	chr7	-	1996	7	NNC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-15	-13	intron_retention	FALSE	canonical	3	4	junction_1	384.251942812988	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145867	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140792_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.16	chr7	-	1232	8	NNC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	6	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	410.880488110842	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145881	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44139963_44140622_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.17	chr7	-	4791	3	NIC	ENSMUSG00000008140.19	novel	992	6	NA	NA	-4	-13	intron_retention	FALSE	canonical	3	988	junction_1	48.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145941	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44141750_44141977_44144305_44145679
ES.30773.19	chr7	-	2391	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-15	-13	intron_retention	FALSE	canonical	3	258	junction_1	290.158385866907	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGCTCACTTCCTG	NA	False	NA	-14	True	ATTAAA	-18	NA	44145867	44139547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140395_44140586_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.2	chr7	-	2063	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTTCTTGGTTCATT	NA	False	NA	26	True	NA	NA	NA	44145867	44139362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.20	chr7	-	1616	7	NIC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	13	-15	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	380.611642257856	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTTCAGCTCACTTCC	NA	False	NA	-16	True	ATTAAA	-16	NA	44145874	44139549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142601_44142724_44144231_44144305_44145679
ES.30773.21	chr7	-	3356	6	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-9	-15	intron_retention	FALSE	canonical	3	278	junction_1	302.286354306641	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTTCAGCTCACTTCC	NA	False	NA	-16	True	ATTAAA	-16	NA	44145839	44139549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44144305_44145679
ES.30773.22	chr7	-	2405	7	NNC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	-9	-21	intron_retention	FALSE	non_canonical	0	0	junction_1	385.735948833165	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCACTCTTCAGCTC	NA	False	NA	-22	True	ATTAAA	-10	NA	44145839	44139555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140219_44140360_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.23	chr7	-	1587	7	NNC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	382.999310994448	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCACTCTTCAGCTC	NA	False	NA	-22	True	ATTAAA	-10	NA	44145852	44139555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144220_44144305_44145679
ES.30773.24	chr7	-	1511	8	NNC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	4	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	365.374730759464	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCCACTCTTCAGCTC	NA	False	NA	-22	True	ATTAAA	-10	NA	44145848	44139555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44139878_44139938_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.25	chr7	-	4825	3	NIC	ENSMUSG00000008140.19	novel	701	6	NA	NA	0	-23	intron_retention	FALSE	canonical	3	981	junction_1	52	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACAGCCACTCTTCAGC	NA	False	NA	-24	True	ATTAAA	-8	NA	44145852	44139557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44141473_44141567_44144305_44145679
ES.30773.26	chr7	-	1152	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	66	637	16	310	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTCTCTCCAGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	44145871	44139998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.27	chr7	-	1217	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-22	467	0	307	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGCTCTCTCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	44145852	44140001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.3	chr7	-	1646	5	NNC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	459.681071505016	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTTCTTGGTTCATT	NA	False	NA	26	True	NA	NA	NA	44145868	44139362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140541_44141986_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.4	chr7	-	1792	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	60	3	10	-3	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACACATTTCTTGGTTCA	NA	False	NA	24	True	NA	NA	NA	44145877	44139364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.5	chr7	-	1581	7	NNC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	-8	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	377.915077174166	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCGAACTCTGGGAGG	NA	False	NA	-15	True	ATTAAA	-19	NA	44145860	44139403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144266_44145795
ES.30773.6	chr7	-	1682	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	30	143	-20	30	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCGCTGTGGTTTG	NA	False	NA	29	True	NA	NA	NA	44145907	44139504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.7	chr7	-	1715	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-54	1	3	-1	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTGCCTTCTGTGCTT	NA	False	NA	-2	True	ATTAAA	-30	NA	44145884	44139535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ES.30773.8	chr7	-	1350	5	NIC	ENSMUSG00000008140.19	novel	1872	7	NA	NA	-12	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	447.956750144475	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTTCCTGCCTTCTGTG	NA	False	NA	-5	True	ATTAAA	-27	NA	44145864	44139538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44140395_44141378_44141473_44141977_44142083_44142613_44142724_44145679
ES.30773.9	chr7	-	3016	2	NNC	ENSMUSG00000008140.19	novel	749	2	NA	NA	1809	-12	intron_retention	FALSE	non_canonical	0	0	junction_1	0	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGCTCACTTCCTGC	NA	False	NA	-13	True	ATTAAA	-19	NA	44144012	44139546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44140539_44141988
ES.30774.1	chr7	+	2191	1	NIC	ENSMUSG00000051113.10	novel	862	5	NA	NA	-8	831	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCGAAAGAAAAAAAATGCC	5474	False	NA	NA	False	NA	NA	NA	44146073	44148264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44146100_44148300
ES.30775.1	chr7	-	3586	28	FSM	ENSMUSG00000038670.12	ENSMUST00000165208.4	3611	28	2	23	2	-23	multi-exon	FALSE	canonical	0	0	junction_8	5.68394847207433	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATCATGTGTCCATCTT	NA	False	NA	-18	True	GATAAA	-14	NA	44174078	44151145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44151267_44153060_44153248_44154422_44154560_44154659_44154820_44154989_44155130_44155475_44155672_44156231_44156321_44156458_44156627_44157654_44157790_44158392_44158582_44158957_44159063_44159154_44159315_44161232_44161373_44161515_44161546_44161884_44161992_44163091_44163258_44164272_44164446_44165349_44165456_44165566_44165692_44165806_44165940_44166234_44166429_44169756_44169817_44170162_44170212_44171098_44171217_44171403_44171553_44171744_44171832_44172254_44172333_44173994
ES.30776.1	chr7	-	5973	31	Fusion	ENSMUSG00000038644.15_ENSMUSG00000008193.14	novel	2788	6	NA	NA	-43	-8	multi-exon	FALSE	canonical	0	0	junction_1	482.975395048466	1398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAGCCGTCTTGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	44198200	44175424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_44177682_44178260_44178412_44178802_44179033_44179280_44179354_44180646_44180675_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.100	chr7	-	2327	21	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-43	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	415.313432843196	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198200	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190383_44192824_44192861_44198178
ES.30776.101	chr7	-	3781	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	27	-1	intron_retention	FALSE	canonical	3	875	junction_25	154.051233036286	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198235	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.102	chr7	-	3537	28	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	416.549003962717	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198224	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183236_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44184763_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.105	chr7	-	7164	19	NIC	ENSMUSG00000038644.15	novel	3496	26	NA	NA	-42	0	intron_retention	FALSE	canonical	3	875	junction_18	146.365600087209	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198199	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.106	chr7	-	4494	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	0	intron_retention	FALSE	canonical	3	875	junction_23	159.235294507886	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198221	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44192303_44192664_44192861_44198178
ES.30776.107	chr7	-	3407	23	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	intron_retention	FALSE	non_canonical	0	0	junction_5	299.461734748385	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183874_44185032_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.108	chr7	-	6538	20	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	40	0	intron_retention	FALSE	canonical	3	875	junction_19	145.642620318318	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44185261_44185354_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.109	chr7	-	5044	22	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	0	intron_retention	FALSE	canonical	3	875	junction_21	160.188253764098	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198220	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192861_44198178
ES.30776.11	chr7	-	5442	22	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	2	intron_retention	FALSE	canonical	3	875	junction_21	155.488973440814	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198223	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44192303_44192664_44192861_44198178
ES.30776.110	chr7	-	3449	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	285.390195363239	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198288	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191094_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.111	chr7	-	3408	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	285.53018265518	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187023_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.113	chr7	-	3521	28	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	359.616008438692	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44184763_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.114	chr7	-	8492	13	NIC	ENSMUSG00000038644.15	novel	3496	26	NA	NA	19	0	intron_retention	FALSE	canonical	3	875	junction_12	152.459193083118	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198243	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182726_44182796_44182850_44183107_44184141_44184440_44187868_44188027_44188117_44188196_44188389_44188477_44190435_44190698_44190829_44190913_44191247_44191322_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.115	chr7	-	3662	28	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	356.31121474889	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198165	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44197155_44197332_44198035
ES.30776.118	chr7	-	6530	22	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	41	0	intron_retention	FALSE	canonical	3	875	junction_21	163.278402535957	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198221	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44184617_44185122_44185261_44185354_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.119	chr7	-	4338	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	363.406345015649	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198220	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183236_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44189853_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.12	chr7	-	4871	24	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	41	2	intron_retention	FALSE	canonical	3	875	junction_23	157.017150761534	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198221	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.122	chr7	-	4326	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	285.34995642743	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44189853_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.123	chr7	-	5976	19	NNC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	42	0	intron_retention	FALSE	canonical	2	3	junction_4	317.955180667937	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198220	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182850_44183107_44185261_44185354_44185451_44187103_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.124	chr7	-	4049	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-4984	0	intron_retention	FALSE	canonical	3	1076	junction_14	115.035196389269	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44192826	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664
ES.30776.125	chr7	-	4432	26	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_15	290.973279872912	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198236	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188481_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.126	chr7	-	4360	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	intron_retention	FALSE	canonical	3	875	junction_23	152.735188503447	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.127	chr7	-	2424	20	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	490.84567196239	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198221	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183805_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185353_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190416_44198174
ES.30776.129	chr7	-	5042	25	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-43	0	intron_retention	FALSE	canonical	2	58	junction_8	282.350301413569	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198200	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185257_44185354_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.130	chr7	-	3074	23	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-5019	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	300.635033809633	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44192861	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191322_44192635
ES.30776.131	chr7	-	3965	15	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-2056	0	intron_retention	FALSE	canonical	3	933	junction_10	156.367437499641	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44189898	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785
ES.30776.132	chr7	-	3906	26	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_25	369.206933846048	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198197	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192667_44192889_44198178
ES.30776.134	chr7	-	4928	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	intron_retention	FALSE	canonical	3	875	junction_24	154.247090509207	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.135	chr7	-	3500	27	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_26	275.44398801307	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198179	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198035
ES.30776.138	chr7	-	7565	17	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	3819	0	intron_retention	FALSE	canonical	3	933	junction_7	124.143802075456	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44194338	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182726_44182796_44182850_44183107_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664
ES.30776.139	chr7	-	3412	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	280.483205205529	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198220	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183236_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.140	chr7	-	3424	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	366.057633206033	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198224	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184641_44185122_44185261_44185354_44185449_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.141	chr7	-	3425	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	278.680226494549	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198199	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182367_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.142	chr7	-	4224	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-38	0	intron_retention	FALSE	canonical	3	875	junction_23	145.550594039773	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198195	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.144	chr7	-	3222	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_6	275.463228762025	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198197	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.145	chr7	-	3419	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	284.609877805354	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198222	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190248_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.146	chr7	-	3900	24	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	30	0	intron_retention	FALSE	canonical	1	7	junction_4	293.602202491958	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198232	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.147	chr7	-	4499	22	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-45	0	intron_retention	FALSE	canonical	3	875	junction_21	141.24087272098	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198202	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.149	chr7	-	3206	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	283.061559382407	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198224	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44198178
ES.30776.15	chr7	-	3515	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	19	2	intron_retention	FALSE	canonical	3	875	junction_25	149.475648852915	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198243	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.150	chr7	-	4566	23	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	44	0	intron_retention	FALSE	canonical	3	875	junction_22	143.913606142914	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198218	44182174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.151	chr7	-	5939	23	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	-1	intron_retention	FALSE	canonical	3	875	junction_22	156.158857715389	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGGCTGTGTGTTGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	44198221	44182175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.152	chr7	-	3363	26	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-5018	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	281.369041651707	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGGCTGTGTGTTGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	44192860	44182175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184432_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664
ES.30776.153	chr7	-	4483	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	50	-1	intron_retention	FALSE	canonical	3	875	junction_23	142.536911944032	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGGCTGTGTGTTGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	44198212	44182175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.154	chr7	-	3285	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	49	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	290.026051243677	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGGCTGTGTGTTGTGG	NA	False	NA	-8	True	AATAAA	-15	NA	44198213	44182175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.158	chr7	-	3839	25	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	42	1	intron_retention	FALSE	canonical	3	875	junction_24	155.064631462354	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACTGGCTGTGTGTTGTG	NA	False	NA	-9	True	AATAAA	-14	NA	44198220	44182176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.159	chr7	-	4643	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	1	intron_retention	FALSE	canonical	3	875	junction_24	140.924323417058	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACTGGCTGTGTGTTGTG	NA	False	NA	-9	True	AATAAA	-14	NA	44198224	44182176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.16	chr7	-	3354	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	285.453796300706	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTTGTGGTCTTTGG	NA	False	NA	-1	True	AATAAA	-22	NA	44198224	44182168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192256_44192671_44192861_44198178
ES.30776.161	chr7	-	4866	12	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-2593	0	intron_retention	FALSE	canonical	3	1229	junction_7	99.7150485588354	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGGCTGTGTGTTGT	NA	False	NA	-10	True	AATAAA	-13	NA	44190435	44182177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267
ES.30776.162	chr7	-	2524	18	NNC	ENSMUSG00000038644.15	novel	581	4	NA	NA	-10	979	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	307.294860822451	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAACGCAGAGCAGA	NA	False	NA	NA	False	AATAAA	-7	NA	44198283	44185963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44186235_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.18	chr7	-	4268	23	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	49	0	intron_retention	FALSE	canonical	3	875	junction_22	137.160708358317	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198213	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.19	chr7	-	3595	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_17	279.491264378523	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198337	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189873_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.2	chr7	-	4339	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	2	intron_retention	FALSE	canonical	3	875	junction_23	140.061477185214	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198222	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44192303_44192664_44192861_44198178
ES.30776.20	chr7	-	3389	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	284.859004363323	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198221	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191660_44192188_44192303_44192664_44192861_44198178
ES.30776.21	chr7	-	4373	23	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	0	intron_retention	FALSE	canonical	3	875	junction_22	152.304094462633	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198221	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.22	chr7	-	3671	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_8	282.878089136662	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198220	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.26	chr7	-	4863	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	0	intron_retention	FALSE	canonical	3	875	junction_23	143.485770554459	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198223	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.27	chr7	-	3423	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_22	284.5738743118	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198246	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191328_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.28	chr7	-	3643	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	23	0	intron_retention	FALSE	canonical	3	875	junction_25	140.214441481611	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198239	44182169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.3	chr7	-	3545	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	-89	-2	-87	2	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198360	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.30	chr7	-	5440	22	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	-1	intron_retention	FALSE	canonical	3	875	junction_21	155.75252188187	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTGTGGTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44198223	44182170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192861_44198178
ES.30776.31	chr7	-	5749	20	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	32	-1	intron_retention	FALSE	canonical	3	875	junction_19	156.815169004522	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTGTGGTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44198230	44182170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.33	chr7	-	3578	28	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	356.31121474889	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTGTGGTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44198220	44182170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44197155_44197332_44198178
ES.30776.35	chr7	-	3395	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	280.185233002918	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198228	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182836_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.36	chr7	-	4158	24	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-15	1	intron_retention	FALSE	canonical	0	0	junction_21	293.857005205775	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198288	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191834_44192188_44192303_44192664_44192861_44198178
ES.30776.37	chr7	-	4017	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	19	1	intron_retention	FALSE	canonical	3	875	junction_24	150.580520172948	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198243	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.38	chr7	-	4956	23	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	39	1	intron_retention	FALSE	canonical	3	875	junction_22	154.22032645183	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198223	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.39	chr7	-	3362	26	FSM	ENSMUSG00000038644.15	ENSMUST00000151793.8	3302	26	-22	-38	-11	1	multi-exon	FALSE	canonical	1	7	junction_5	286.751320833924	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198284	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.4	chr7	-	3401	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	284.859004363323	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198220	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191669_44192186_44192303_44192664_44192861_44198178
ES.30776.42	chr7	-	3302	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	27	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	284.704489602816	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTGTTGTGGTCTT	NA	False	NA	-4	True	AATAAA	-19	NA	44198235	44182171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.45	chr7	-	4077	28	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	464.863255554667	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198220	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182367_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44184763_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44189435_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.46	chr7	-	5017	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	0	intron_retention	FALSE	canonical	3	875	junction_23	152.233777044866	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198222	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.47	chr7	-	5166	22	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	42	0	intron_retention	FALSE	canonical	3	875	junction_21	156.676465173392	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198220	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.48	chr7	-	4634	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	44	0	intron_retention	FALSE	canonical	3	875	junction_24	155.953646736957	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198218	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.49	chr7	-	3423	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_4	276.721767106479	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198273	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183338_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.50	chr7	-	5285	22	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	44	0	intron_retention	FALSE	canonical	3	875	junction_21	154.913844829079	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198218	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.51	chr7	-	3352	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	285.04187640025	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198244	44182172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.54	chr7	-	4058	25	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	32	-1	intron_retention	FALSE	canonical	0	0	junction_15	290.616968228323	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198230	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188849_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.55	chr7	-	5467	22	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	32	-1	intron_retention	FALSE	canonical	3	875	junction_21	155.854734970415	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198230	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.56	chr7	-	3316	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_12	282.65462741657	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198254	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.57	chr7	-	4733	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	-1	intron_retention	FALSE	canonical	3	875	junction_23	143.670950978301	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198222	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.59	chr7	-	4088	23	NNC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	32	-1	intron_retention	FALSE	canonical	2	3	junction_7	295.874470813788	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198230	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.6	chr7	-	4495	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-44	2	intron_retention	FALSE	canonical	3	875	junction_24	151.170933190434	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198201	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.60	chr7	-	5993	22	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	875	junction_21	157.25789440112	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198197	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44185261_44185354_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.63	chr7	-	4227	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-45	-1	intron_retention	FALSE	canonical	1	2	junction_7	294.239600849942	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198202	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.64	chr7	-	4666	23	NNC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	42	-1	intron_retention	FALSE	canonical	0	0	junction_3	294.961770880553	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198220	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182947_44183107_44183222_44183308_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.65	chr7	-	4121	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	-1	intron_retention	FALSE	canonical	3	875	junction_24	155.354232320848	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198222	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.66	chr7	-	3480	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	37	-1	intron_retention	FALSE	canonical	3	875	junction_25	153.576560711588	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198225	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.67	chr7	-	4283	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	285.34995642743	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198197	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188849_44188963_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.68	chr7	-	3502	5	NIC	ENSMUSG00000038644.15	novel	3496	26	NA	NA	1206	-1	intron_retention	FALSE	canonical	3	1280	junction_4	94.3265604164596	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44186636	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182850_44183107_44184141_44184440_44185261_44185354
ES.30776.69	chr7	-	5615	19	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	326.799883078692	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198277	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190406_44191094_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.7	chr7	-	3938	24	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	39	2	intron_retention	FALSE	canonical	3	875	junction_23	152.018156312893	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTGTGGTCTTTGGG	NA	False	NA	0	True	AATAAA	-23	NA	44198223	44182167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.70	chr7	-	2923	8	NIC	ENSMUSG00000038644.15	novel	3496	26	NA	NA	1132	-1	intron_retention	FALSE	canonical	3	1131	junction_6	123.410382257651	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44186710	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354
ES.30776.72	chr7	-	3857	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	38	-1	intron_retention	FALSE	canonical	3	875	junction_24	151.388916921506	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198224	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.74	chr7	-	3385	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	285.567948576933	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198221	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188374_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.76	chr7	-	3908	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	-1	intron_retention	FALSE	canonical	3	875	junction_25	152.836665757926	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198223	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.78	chr7	-	5383	23	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	40	-1	intron_retention	FALSE	canonical	3	875	junction_22	154.648261260008	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198222	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.79	chr7	-	3482	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	44	-1	intron_retention	FALSE	canonical	3	875	junction_25	154.138119879542	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198218	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.80	chr7	-	3574	24	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-40	-1	intron_retention	FALSE	canonical	1	7	junction_4	292.302831289032	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198197	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.81	chr7	-	7621	19	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	37	-1	intron_retention	FALSE	canonical	3	875	junction_18	144.222232922444	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198225	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44185261_44185354_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.82	chr7	-	4572	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	12	-1	intron_retention	FALSE	canonical	2	3	junction_8	366.447312906091	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198250	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44184763_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.83	chr7	-	3450	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-76	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	285.34995642743	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198349	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188849_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.85	chr7	-	5214	23	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	39	-1	intron_retention	FALSE	canonical	3	875	junction_22	150.518991964964	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198223	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.86	chr7	-	6883	21	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	875	junction_20	151.363626740376	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198201	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44184617_44185122_44185261_44185354_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.87	chr7	-	3506	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_24	363.820408911909	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198209	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185449_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192068_44192303_44192664_44192861_44198178
ES.30776.88	chr7	-	3396	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	359.930450217931	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198197	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182342_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183811_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.89	chr7	-	6065	21	NIC	ENSMUSG00000038644.15	novel	3302	26	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	875	junction_20	147.430754932612	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198208	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44184141_44184440_44184617_44185122_44185261_44185354_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.95	chr7	-	5485	21	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-45	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	311.901330551827	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198202	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185257_44185352_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192861_44198178
ES.30776.96	chr7	-	4854	25	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	31	-1	intron_retention	FALSE	canonical	2	3	junction_7	374.995296266796	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198231	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44184763_44184885_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.97	chr7	-	3571	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	875	junction_25	150.528211309375	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198195	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.98	chr7	-	4711	24	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	875	junction_23	138.605122424075	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198202	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30776.99	chr7	-	4367	25	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	32	-1	intron_retention	FALSE	canonical	0	0	junction_13	376.568829476542	1398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	False	NA	-6	True	AATAAA	-17	NA	44198230	44182173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188481_44188589_44188785_44189435_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ES.30777.10	chr7	-	1993	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	-5	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_9	219.110209599227	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203377	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.12	chr7	-	2005	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	-7	1	-5	0	multi-exon	FALSE	canonical	0	0	junction_9	207.457626195488	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203380	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.13	chr7	-	2117	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	252.351655482367	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203381	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200060_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.14	chr7	-	3080	8	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_7	213.854900264986	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAGCCCAGTGTGG	NA	False	NA	-2	True	AATAAA	-29	NA	44203371	44199041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44203133_44203232
ES.30777.15	chr7	-	2211	9	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_8	260.747962599902	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGAGCCCAGTGTGG	NA	False	NA	-2	True	AATAAA	-29	NA	44203361	44199041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202144_44203002_44203133_44203232
ES.30777.17	chr7	-	1971	10	NIC	ENSMUSG00000060601.14	novel	1988	10	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	212.17137261663	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTGAGCCCAGTGTG	NA	False	NA	-3	True	AATAAA	-28	NA	44203371	44199042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203246
ES.30777.18	chr7	-	2333	8	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	30	junction_7	204.014505286626	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCCTGAGCCCAGT	NA	False	NA	-6	True	AATAAA	-25	NA	44203371	44199045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44202045_44202120_44202179_44203002_44203133_44203246
ES.30777.19	chr7	-	2085	10	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	253.147641496147	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203374	44199055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.2	chr7	-	4259	2	FSM	ENSMUSG00000060601.14	ENSMUST00000142298.2	544	2	-738	-2977	-1	0	multi-exon	FALSE	canonical	3	614	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203374	44199039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44202045_44202120
ES.30777.20	chr7	-	2715	8	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	214.070558652124	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203371	44199055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.21	chr7	-	2815	7	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_6	254.543818537311	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203366	44199055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.22	chr7	-	3626	6	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	-11	1	intron_retention	FALSE	canonical	0	0	junction_5	251.762268817232	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGTACAAGCCATT	NA	False	NA	-18	True	AATAAA	-13	NA	44203358	44199057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44201284_44201378_44202045_44202120_44203133_44203232
ES.30777.30	chr7	-	2568	7	NIC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_6	247.693639177289	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203376	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44200269_44200741_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.34	chr7	-	1893	10	NNC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	250.543409412421	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203369	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200807_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.36	chr7	-	1844	10	NNC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	257.723988640925	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203371	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44199556_44199723_44199822_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.38	chr7	-	2327	8	NIC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	238.747155127831	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203371	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.39	chr7	-	3485	4	NIC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	211	0	intron_retention	FALSE	canonical	3	563	junction_2	49.6006272361774	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44202899	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44201284_44201378_44202045_44202120
ES.30777.4	chr7	-	1860	10	NNC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	244.222576079008	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203346	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44199556_44199723_44199822_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.41	chr7	-	2891	6	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	250.201039166507	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203370	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.42	chr7	-	3053	4	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	439	junction_3	104.678343297721	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203356	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44202179_44203002
ES.30777.44	chr7	-	1332	6	NNC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.542990125966	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203367	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44203264
ES.30777.45	chr7	-	2319	8	NIC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_7	236.748122419984	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203370	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.46	chr7	-	2199	9	NIC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_8	227.612609492532	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203370	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ES.30777.47	chr7	-	1266	6	NNC	ENSMUSG00000060601.14	novel	1944	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.542990125966	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203374	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201237_44203290
ES.30777.48	chr7	-	2061	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	282.288312471531	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203387	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201789_44201930_44202045_44202120_44202144_44203002_44203133_44203232
ES.30777.49	chr7	-	3105	5	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	439	junction_4	88.3374212890551	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203369	44199075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44200922_44201023_44201284_44201378_44202179_44203002
ES.30777.5	chr7	-	2832	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-611	-368	-571	0	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203946	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
ES.30777.51	chr7	-	3447	6	NIC	ENSMUSG00000060601.14	novel	1853	9	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_5	227.597539529759	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAATAAAAAAACAAAAATAA	NA	False	NA	-37	True	NA	NA	NA	44203369	44199076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44203133_44203232
ES.30777.6	chr7	-	4148	3	NIC	ENSMUSG00000060601.14	novel	1988	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	563	junction_1	25.5	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203359	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44201284_44201378_44202045_44202120
ES.30777.9	chr7	-	2249	9	NIC	ENSMUSG00000060601.14	novel	1988	10	NA	NA	-1	0	intron_retention	TRUE	canonical	3	30	junction_8	216.336976728436	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203374	44199040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202182_44203002_44203133_44203246
ES.30778.1	chr7	-	136	1	Intergenic	novelGene_25376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	44208099	44207963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44208000_44208100
ES.30779.1	chr7	-	195	1	Intergenic	novelGene_25377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACATGGTGTTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	44216788	44216593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44216600_44216800
ES.3078.1	chr10	-	187	1	Intergenic	novelGene_2401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAACAGACAC	NA	False	NA	NA	False	NA	NA	NA	71145910	71145723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_71145700_71145900
ES.30780.1	chr7	+	177	1	Intergenic	novelGene_25378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGAAAAAGTCTCTG	385	False	NA	NA	False	NA	NA	NA	44218944	44219121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44218900_44219100
ES.30781.1	chr7	+	1142	1	NIC	ENSMUSG00000002204.10	novel	1560	9	NA	NA	-316	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAGAGAAAAAA	3111	False	NA	NA	False	AATATA	-2	NA	44231461	44232603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44231500_44232600
ES.30782.1	chr7	-	2226	1	Antisense	novelGene_ENSMUSG00000002204.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTGTCTT	5521	False	NA	NA	False	NA	NA	NA	44235755	44233529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_44233500_44235800
ES.30783.1	chr7	+	2774	6	NIC	ENSMUSG00000062785.15	novel	2960	6	NA	NA	8	-13	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.78567765543682	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGTCAATA	4121	False	NA	NA	False	NA	NA	NA	44240317	44251515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250097_44250353_44251292
ES.30783.2	chr7	+	5239	6	NIC	ENSMUSG00000062785.15	novel	2731	5	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.03315017762062	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGCTTTTCTCATTTG	4121	False	NA	NA	False	AATAAA	-18	NA	44240317	44254175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250292_44250353_44251292
ES.30783.3	chr7	+	2713	6	NIC	ENSMUSG00000062785.15	novel	2731	5	NA	NA	12	88	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.03315017762062	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGCAA	4125	False	NA	NA	False	NA	NA	NA	44240321	44251653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250292_44250353_44251292
ES.30783.4	chr7	+	6160	5	NIC	ENSMUSG00000062785.15	novel	2731	5	NA	NA	26	-4	intron_retention	FALSE	canonical	0	0	junction_4	1.92028643696715	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGGCTTTTCTCATTT	4139	False	NA	NA	False	AATAAA	-17	NA	44240335	44254174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250292
ES.30783.6	chr7	+	2909	6	NIC	ENSMUSG00000062785.15	novel	2960	6	NA	NA	27	104	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	2.78567765543682	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACCTCAGGTCTCCATG	4140	False	NA	NA	False	NA	NA	NA	44240336	44251669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44241183_44244584_44245693_44247804_44248000_44248229_44248358_44250097_44250353_44251292
ES.30783.7	chr7	+	1637	4	NNC	ENSMUSG00000062785.15	novel	2960	6	NA	NA	956	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	0.471404520791032	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGGCTTTTCTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	44246472	44254174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44246828_44247463_44248358_44250097_44250438_44254126
ES.30783.8	chr7	+	1103	2	NNC	ENSMUSG00000062785.15	novel	5281	4	NA	NA	5978	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGGCTTTTCTCATTT	1427	False	NA	NA	False	AATAAA	-17	NA	44251494	44254174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44252536_44254112
ES.30784.1	chr7	+	177	1	Intergenic	novelGene_25379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAACAGTTTAAAAAGACA	7049	False	NA	NA	False	NA	NA	NA	44268512	44268689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44268500_44268700
ES.30785.1	chr7	+	174	1	Intergenic	novelGene_25380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGTGAATGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	44275743	44275917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44275700_44275900
ES.30786.1	chr7	+	172	1	Intergenic	novelGene_25381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	44303001	44303173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44303000_44303200
ES.30787.10	chr7	-	3221	4	NIC	ENSMUSG00000030739.19	novel	4143	26	NA	NA	336	0	intron_retention	FALSE	canonical	3	68	junction_3	10.9848380355227	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	44263213	44255227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44257968_44260946_44261156_44262858_44262983_44263065
ES.30787.11	chr7	-	3730	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	21.0842951032279	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	44279955	44255227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279919
ES.30787.14	chr7	-	4759	24	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	31903	2	-813	0	intron_retention	FALSE	canonical	3	17	junction_23	20.1472837742029	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44283022	44255228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358
ES.30787.16	chr7	-	1472	7	FSM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	-34	0	-34	0	multi-exon	FALSE	canonical	3	22	junction_6	22.8837642591132	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44263583	44255228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263374
ES.30787.17	chr7	-	1532	7	NNC	ENSMUSG00000030739.19	novel	1438	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	26.7669987526099	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44263535	44255228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263266
ES.30787.2	chr7	-	3961	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_20	20.319694879599	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44280014	44255226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279748
ES.30787.20	chr7	-	4157	24	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	21.4662878087324	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGGCTGCGTTTCTA	NA	False	NA	-4	True	AATAAA	-14	NA	44282180	44255229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282117
ES.30787.22	chr7	-	3839	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-262	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	21.0842951032279	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACCATGGCTGCGTTTCT	NA	False	NA	-5	True	AATAAA	-13	NA	44280268	44255230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280120
ES.30787.23	chr7	-	3282	18	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-31	-5563	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_17	17.3169117490952	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCCCTAACTAGTAGAT	NA	False	NA	NA	False	NA	NA	NA	44280037	44260805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279748
ES.30787.24	chr7	-	4957	33	ISM	ENSMUSG00000030739.19	ENSMUST00000107900.4	6400	40	9865	5563	-3070	-5563	internal_fragment	FALSE	canonical	2	5	junction_28	20.5806341010184	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCCCTAACTAGTAGAT	1937	False	NA	NA	False	NA	NA	NA	44305062	44260805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358_44282429_44282898_44283021_44283782_44283971_44287188_44287304_44287713_44287888_44288366_44288541_44288659_44288813_44290484_44290604_44292887_44292984_44301854_44301996_44303379_44303479_44304645_44304710_44305015
ES.30787.25	chr7	-	859	4	NNC	ENSMUSG00000030739.19	novel	1438	7	NA	NA	-15	-5565	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	34.6634613902818	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGCCCTAACTAGTAG	NA	False	NA	NA	False	NA	NA	NA	44263564	44260807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44261156_44262858_44262983_44263065_44263155_44263266
ES.30787.27	chr7	-	176	1	Intergenic	novelGene_25382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTTAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	44337785	44337609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44337600_44337800
ES.30787.3	chr7	-	3750	21	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	20.5294909824866	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44280047	44255226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279992
ES.30787.4	chr7	-	4035	21	NIC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	8	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	21.0842951032279	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44279998	44255226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44279658
ES.30787.6	chr7	-	4153	24	NNC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	21.2860613622525	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44282143	44255226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282087
ES.30787.7	chr7	-	6565	43	NNC	ENSMUSG00000030739.19	novel	6457	42	NA	NA	-28120	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	25.0132844523259	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44348387	44255226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358_44282429_44282898_44283021_44283782_44283971_44287188_44287304_44287713_44287888_44288366_44288541_44288659_44288813_44290484_44290604_44292887_44292984_44301854_44301996_44303379_44303479_44304645_44304710_44305015_44305109_44306840_44306865_44307358_44307462_44307637_44307666_44310331_44310489_44314528_44314925_44346647_44346758_44348345
ES.30787.8	chr7	-	4142	24	NIC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	21.0276620404758	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTGCGTTTCTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	44282220	44255227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282174
ES.30788.1	chr7	+	171	1	Intergenic	novelGene_25383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	1532	False	NA	NA	False	NA	NA	NA	44353291	44353462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44353300_44353500
ES.30789.1	chr7	+	916	6	FSM	ENSMUSG00000066500.6	ENSMUST00000207182.2	490	6	-315	-111	-2	110	multi-exon	FALSE	canonical	1	3	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCTGAGTGTATACTC	186	False	NA	NA	False	ATTAAA	-29	NA	44358163	44369378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44358555_44359678_44359766_44359934_44359956_44362421_44362503_44364751_44364876_44369166
ES.30789.2	chr7	+	640	7	NIC	ENSMUSG00000066500.6	novel	704	7	NA	NA	83	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.70782512765993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTGTACATTCCCT	271	False	NA	NA	False	AATAAA	-25	NA	44358248	44369268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44358399_44358479_44358555_44359678_44359766_44359934_44359956_44362421_44362503_44364751_44364876_44369166
ES.3079.1	chr10	+	175	1	Intergenic	novelGene_2402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAAGTCTTCGC	NA	False	NA	NA	False	NA	NA	NA	71151080	71151255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71151100_71151300
ES.30790.1	chr7	+	194	1	Intergenic	novelGene_25384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGTTCAAGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	44369805	44369999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44369800_44370000
ES.30791.1	chr7	+	1978	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	-11	2	-11	-2	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGAGAGTTCAGTGT	NA	False	NA	14	True	AATAAA	-14	NA	44397825	44426937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.2	chr7	+	3650	14	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	-48	0	intron_retention	FALSE	canonical	3	94	junction_1	19.8279582658952	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44397959	44426939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.3	chr7	+	2717	14	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	94	junction_1	19.7936096316089	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGGAGAGTTCAGTG	NA	False	NA	13	True	AATAAA	-13	NA	44398042	44426936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.4	chr7	+	4563	13	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	94	junction_1	20.3510851471529	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGGAGAGTTCAGTG	NA	False	NA	13	True	AATAAA	-13	NA	44398045	44426936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.5	chr7	+	1690	14	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.5004002765696	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGGAGAGTTCAG	NA	False	NA	11	True	AATAAA	-11	NA	44398048	44426934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398076_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.6	chr7	+	2476	15	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	39.2436788098493	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGGAGAGTTCAG	NA	False	NA	11	True	AATAAA	-11	NA	44398070	44426934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398822_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.7	chr7	+	4072	14	NIC	ENSMUSG00000002205.17	novel	735	4	NA	NA	-83	0	intron_retention	FALSE	canonical	2	7	junction_1	40.6741998390181	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44398283	44426939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44398822_44401538_44401601_44403239_44403380_44407169_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ES.30791.8	chr7	+	6196	3	NNC	ENSMUSG00000002205.17	novel	735	4	NA	NA	1251	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	75	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGGAGAGTTCAGTG	NA	False	NA	13	True	AATAAA	-13	NA	44407660	44426936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44408890_44420283_44424960_44426645
ES.30791.9	chr7	+	1907	1	Intergenic	novelGene_25385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAAAGAACATCTAATT	NA	False	NA	NA	False	NA	NA	NA	44422497	44424404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44422500_44424400
ES.30792.1	chr7	-	4006	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	-21	-2979	-21	0	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTTTTAATTTTT	NA	False	NA	-5	True	AATAAA	-24	NA	44397794	44380903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
ES.30792.10	chr7	-	4001	6	NNC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.4576878892155	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGGCTATTTTTTAAT	NA	False	NA	-9	True	AATAAA	-20	NA	44397715	44380907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44391634_44391716_44397333
ES.30792.11	chr7	-	3728	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120074.8	3624	5	-77	-27	-77	3	multi-exon	FALSE	canonical	1	2	junction_4	25.0499500997507	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCACTGGCTATTTTT	NA	False	NA	-13	True	AATAAA	-16	NA	44397550	44380911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397359
ES.30792.13	chr7	-	3655	5	FSM	ENSMUSG00000048012.20	ENSMUST00000118162.8	3091	5	-44	-520	-1	2	multi-exon	FALSE	canonical	2	10	junction_4	23.9217474278114	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTCACTGGCTATTTT	NA	False	NA	-14	True	AATAAA	-15	NA	44397774	44380912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397652
ES.30792.16	chr7	-	3927	5	NNC	ENSMUSG00000048012.20	novel	3559	5	NA	NA	-75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.551804601771	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAATGTTCACTGGCTAT	NA	False	NA	-17	True	AATAAA	-12	NA	44397548	44380915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44384252_44387389_44387456_44388926_44389060_44391112_44391290_44397333
ES.30792.17	chr7	-	7069	4	NIC	ENSMUSG00000048012.20	novel	1006	5	NA	NA	-77	-2	intron_retention	FALSE	canonical	3	48	junction_1	6.12825877028341	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTCACTGGCTA	NA	False	NA	-18	True	AATAAA	-11	NA	44397550	44380916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44387459_44388926_44389060_44391112_44391290_44397333
ES.30792.19	chr7	-	3263	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	299	-2556	-1	106	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTAATTTTGTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	44397474	44381326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
ES.30792.20	chr7	-	3236	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120074.8	3624	5	-1	389	-1	105	multi-exon	FALSE	canonical	1	2	junction_4	25.0499500997507	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACTAATTTTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	44397474	44381327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397359
ES.30792.21	chr7	-	3186	5	FSM	ENSMUSG00000048012.20	ENSMUST00000140599.9	1006	5	257	-2437	-43	-13	multi-exon	FALSE	canonical	3	48	junction_2	7.63216876123687	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTACAGACGCATTTC	NA	False	NA	NA	False	AATAAA	-13	NA	44397516	44381445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333
ES.30792.4	chr7	-	2984	2	NNC	ENSMUSG00000048012.20	novel	9230	3	NA	NA	9627	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTATTTTTTAATTTT	NA	False	NA	-6	True	AATAAA	-23	NA	44384027	44380904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44383069_44383207
ES.30792.6	chr7	-	3749	5	NNC	ENSMUSG00000048012.20	novel	1006	5	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.4693443182191	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCTATTTTTTAATTT	NA	False	NA	-7	True	AATAAA	-22	NA	44397523	44380905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44384070_44387389_44387475_44388926_44389060_44391112_44391290_44397333
ES.30792.7	chr7	-	3599	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120798.8	3559	5	-20	-20	-20	-3	multi-exon	FALSE	canonical	2	7	junction_4	24.8633766813762	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397835	44380906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397775
ES.30792.8	chr7	-	3609	6	NNC	ENSMUSG00000048012.20	novel	1006	5	NA	NA	47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.2258476702143	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397683	44380906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397333_44397370_44397652
ES.30792.9	chr7	-	4264	7	NNC	ENSMUSG00000048012.20	novel	1006	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.4505234814822	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCTATTTTTTAATT	NA	False	NA	-8	True	AATAAA	-21	NA	44397769	44380906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44391634_44391866_44391947_44392003_44397333
ES.30793.10	chr7	+	2471	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	-22	60721	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	493	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTACACTGTAAACTGTGA	348	False	NA	NA	False	NA	NA	NA	44465784	44540957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44477910_44480232_44540930
ES.30793.11	chr7	+	5803	7	NIC	ENSMUSG00000074141.14	novel	2275	9	NA	NA	-25	-4	intron_retention	FALSE	canonical	1	4	junction_4	2.75378527364305	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACAGGCTCACTTCC	349	False	NA	1	True	AATAAA	-12	NA	44465785	44490224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44465908_44481539_44481606_44483374_44486291_44486799_44486913_44487412_44488644_44488747_44488885_44489006
ES.30793.12	chr7	+	4195	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	275	-1748	-20	1748	multi-exon	FALSE	canonical	3	986	junction_1	0	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCACTGATTTTTTGTTT	350	False	NA	NA	False	NA	NA	NA	44465786	44481984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465908_44477910
ES.30793.13	chr7	+	3445	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208172.2	715	2	64	-2794	-19	1023	multi-exon	FALSE	canonical	3	10	junction_1	0	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTTCAGGATTGTAT	351	False	NA	16	True	AATAAA	-18	NA	44465787	44481259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465884_44477910
ES.30793.14	chr7	+	2296	9	FSM	ENSMUSG00000074141.14	ENSMUST00000118125.9	2275	9	-24	3	-15	-3	multi-exon	FALSE	canonical	0	0	junction_6	4.24079886342184	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACAGGCTCACTTCCC	359	False	NA	2	True	AATAAA	-13	NA	44465795	44490225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465908_44481539_44481606_44483374_44483517_44486054_44486291_44486799_44486913_44487412_44487615_44488574_44488644_44488747_44488885_44489006
ES.30793.15	chr7	+	2311	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	493	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	380	False	NA	13	True	AATAAA	-13	NA	44465816	44480228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44477910_44479574_44479671
ES.30793.16	chr7	+	5086	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	312	-2676	17	2676	multi-exon	FALSE	canonical	3	986	junction_1	0	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACATCCTACAGATAG	387	False	NA	NA	False	NA	NA	NA	44465823	44482912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465908_44477910
ES.30793.17	chr7	+	2340	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	493	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCAGACTTGCTGTGA	387	False	NA	11	True	AATAAA	-11	NA	44465823	44480226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44477910_44478020_44478079
ES.30793.18	chr7	+	4603	7	NIC	ENSMUSG00000074141.14	novel	2275	9	NA	NA	5	-3	intron_retention	FALSE	canonical	1	2	junction_4	3.23608130649127	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACAGGCTCACTTCCC	388	False	NA	2	True	AATAAA	-13	NA	44465824	44490225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44465908_44481539_44481606_44483374_44486291_44486799_44486913_44488574_44488644_44488747_44488885_44489006
ES.30793.19	chr7	+	2472	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	401	False	NA	18	True	AATAAA	-18	NA	44465837	44480233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44477713_44477793_44477910
ES.30793.2	chr7	+	2873	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	-150	-1	-150	1	multi-exon	FALSE	canonical	3	986	junction_1	0	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAGTATGGGTAGT	2251	False	NA	22	True	AATAAA	-22	NA	44465361	44480237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465908_44477910
ES.30793.20	chr7	+	2749	2	NNC	ENSMUSG00000109511.2	novel	2708	2	NA	NA	305	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTTGCTGTGAGTATG	675	False	NA	16	True	AATAAA	-16	NA	44466111	44480231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44466540_44477910
ES.30793.21	chr7	+	2555	2	FSM	ENSMUSG00000109511.2	ENSMUST00000207085.2	334	2	-100	-2121	-100	0	multi-exon	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	1091	False	NA	18	True	AATAAA	-18	NA	44467760	44480233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44467993_44477910
ES.30793.22	chr7	+	2530	2	NNC	ENSMUSG00000109511.2	novel	2708	2	NA	NA	673	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	423	False	NA	18	True	AATAAA	-18	NA	44468533	44480233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44468741_44477910
ES.30793.23	chr7	+	2443	2	NNC	ENSMUSG00000109511.2	novel	2708	2	NA	NA	718	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGTGAGTATGGGTA	468	False	NA	20	True	AATAAA	-20	NA	44468578	44480235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44468697_44477910
ES.30793.24	chr7	+	5656	1	NIC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	6719	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	826	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTGTGAGTATGGGTA	492	False	NA	20	True	AATAAA	-20	NA	44474579	44480235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44474600_44480200
ES.30793.25	chr7	+	5310	1	NIC	ENSMUSG00000074141.14	novel	2275	9	NA	NA	-8112	539	mono-exon	FALSE	NA	NA	NA	NA	NA	831	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACACATCCTACAG	10	True	NA	NA	False	NA	NA	NA	44477598	44482908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44477600_44482900
ES.30793.26	chr7	+	2537	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	-703	-674	-65	2	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGAGTTCGTGTTGTG	1102	False	NA	8	True	ATTAAA	-13	NA	44498349	44504834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.27	chr7	+	1866	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107885.8	1812	5	-45	-9	-45	0	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	1122	False	NA	15	True	ATTAAA	-20	NA	44498369	44504841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.28	chr7	+	2128	5	NIC	ENSMUSG00000011096.18	novel	1812	5	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	128.581443062364	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGAGTTCGTGTTGTG	1194	False	NA	8	True	ATTAAA	-13	NA	44498441	44504834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44499114_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.29	chr7	+	1257	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	7	328	7	-315	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTTGTTTTTGTTG	1407	False	NA	NA	False	NA	NA	NA	44498654	44504517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.3	chr7	+	3714	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	30	-1022	30	1022	multi-exon	FALSE	canonical	3	986	junction_1	0	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTCAGGATTGTA	105	False	NA	15	True	AATAAA	-17	NA	44465541	44481258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465908_44477910
ES.30793.30	chr7	+	5601	3	Fusion	ENSMUSG00000076051.3_ENSMUSG00000011096.18	novel	750	4	NA	NA	28	-1	intron_retention	FALSE	canonical	3	289	junction_2	21	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCGTGTTGTGTGTGAG	1428	False	NA	14	True	ATTAAA	-19	NA	44498675	44504840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_44503282_44503362_44503533_44504015
ES.30793.31	chr7	+	4763	4	Fusion	ENSMUSG00000076051.3_ENSMUSG00000011096.18	novel	1757	5	NA	NA	-23	1	intron_retention	FALSE	canonical	3	274	junction_1	24.1246761636296	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGTTGTGTGTGAGTG	1448	False	NA	16	True	ATTAAA	-21	NA	44498695	44504842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.32	chr7	+	2352	4	ISM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	-35	-674	13	2	intron_retention	FALSE	canonical	3	55	junction_1	118.970584599724	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGAGTTCGTGTTGTG	1770	False	NA	8	True	ATTAAA	-13	NA	44499017	44504834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362
ES.30793.33	chr7	+	1493	5	NNC	ENSMUSG00000011096.18	novel	1757	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	128.154203988788	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGTGAGTTCGTGTTG	2162	False	NA	6	True	ATTAAA	-11	NA	44499409	44504832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44499449_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.34	chr7	+	1730	5	NIC	ENSMUSG00000011096.18	novel	1757	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	123.030484027334	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	2186	False	NA	15	True	ATTAAA	-20	NA	44499433	44504841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44499701_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ES.30793.35	chr7	+	5370	1	NIC	ENSMUSG00000011096.18	novel	1592	5	NA	NA	6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	2224	False	NA	15	True	ATTAAA	-20	NA	44499471	44504841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44499500_44504800
ES.30793.36	chr7	+	3311	3	ISM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	1199	4	761	0	intron_retention	FALSE	canonical	3	274	junction_1	28.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	3382	False	NA	15	True	ATTAAA	-20	NA	44500629	44504841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44502384_44503203_44503282_44503362
ES.30793.37	chr7	+	2646	1	Genic_Genomic	ENSMUSG00000011096.18	novel	NA	NA	NA	NA	1159	954	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	5906	False	NA	NA	False	NA	NA	NA	44503153	44505799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_44503200_44505800
ES.30793.38	chr7	+	1790	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	-20	0	-20	0	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9295	False	NA	15	True	AATAAA	-17	NA	44506542	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.39	chr7	+	1789	15	NNC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_10	62.8301890261459	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9322	False	NA	15	True	AATAAA	-17	NA	44506569	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510892_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.4	chr7	+	2243	8	NIC	ENSMUSG00000074141.14	novel	2275	9	NA	NA	-164	-3	combination_of_known_splicesites	TRUE	canonical	1	2	junction_5	3.83325938999964	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACAGGCTCACTTCCC	210	False	NA	2	True	AATAAA	-13	NA	44465646	44490225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44465908_44481539_44481606_44483374_44483517_44486054_44486291_44486799_44486913_44488574_44488644_44488747_44488885_44489006
ES.30793.40	chr7	+	1071	10	ISM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	10	1616	-2	-317	5prime_fragment	FALSE	canonical	3	28	junction_1	61.9426257829686	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTCTCTTGTGCAGACC	9325	False	NA	NA	False	NA	NA	NA	44506572	44510458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412
ES.30793.41	chr7	+	1921	15	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	182	junction_9	24.1053173912026	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9341	False	NA	15	True	AATAAA	-17	NA	44506588	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.42	chr7	+	1724	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	131	329	-50	7	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGGTTGTGGGAGGCA	9466	False	NA	28	True	AATAAA	-30	NA	44506713	44512087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.43	chr7	+	1516	15	NNC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	61.2335775568288	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9490	False	NA	15	True	AATAAA	-17	NA	44506737	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44506979_44508000_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.44	chr7	+	1966	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	155	63	-26	-63	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATGAGCCTGCTTTT	9490	False	NA	27	True	AAGAAA	-20	NA	44506737	44512353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.45	chr7	+	3875	10	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-13	0	intron_retention	FALSE	canonical	3	182	junction_4	29.6872587709498	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9503	False	NA	15	True	AATAAA	-17	NA	44506750	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44509227_44509311_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789
ES.30793.46	chr7	+	4607	13	NIC	ENSMUSG00000002963.18	novel	2184	16	NA	NA	-13	2343	intron_retention	FALSE	canonical	3	182	junction_8	25.9533502440222	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGGTATGGCACTGCC	9503	False	NA	NA	False	TATAAA	-20	NA	44506750	44514759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.47	chr7	+	2585	9	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-8	0	intron_retention	FALSE	canonical	2	9	junction_1	79.6790436689598	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9508	False	NA	15	True	AATAAA	-17	NA	44506755	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506979_44507876_44508174_44509146_44509227_44509311_44510484_44510570_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789
ES.30793.48	chr7	+	2019	15	NIC	ENSMUSG00000002963.18	novel	2184	16	NA	NA	-6	-68	intron_retention	FALSE	canonical	3	182	junction_9	25.4738761743661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGCCTGATGAGCCTG	9510	False	NA	22	True	AAGAAA	-15	NA	44506757	44512348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.49	chr7	+	1810	1	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-5	-1280	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAACAACAAC	9511	False	NA	NA	False	NA	NA	NA	44506758	44508568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506800_44508600
ES.30793.5	chr7	+	2475	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	493	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	217	False	NA	18	True	AATAAA	-18	NA	44465653	44480233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465715_44465816_44465908_44477910
ES.30793.50	chr7	+	1522	2	ISM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	-7	3185	-5	-960	intron_retention	FALSE	canonical	3	239	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGTGGAGGGCAGAGG	9511	False	NA	NA	False	ACTAAA	-19	NA	44506758	44508888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44506979_44507586
ES.30793.51	chr7	+	2130	1	NIC	ENSMUSG00000002963.18	novel	1770	17	NA	NA	-5	-960	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGTGGAGGGCAGAGG	9511	False	NA	NA	False	ACTAAA	-19	NA	44506758	44508888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506800_44508900
ES.30793.52	chr7	+	4077	10	NIC	ENSMUSG00000002963.18	novel	1674	16	NA	NA	-4	0	intron_retention	FALSE	canonical	2	6	junction_9	75.3615155413647	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACAGCCATCTTGCTGG	9512	False	NA	14	True	AATAAA	-16	NA	44506759	44512073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44509370_44509500_44509609_44509783_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511926
ES.30793.53	chr7	+	3043	12	NIC	ENSMUSG00000002963.18	novel	1573	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	182	junction_6	26.9591058536768	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9520	False	NA	15	True	AATAAA	-17	NA	44506767	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44506979_44507586_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.54	chr7	+	1676	16	NNC	ENSMUSG00000002963.18	novel	2184	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.9251878389472	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACAGCCATCTTGCTG	9520	False	NA	13	True	AATAAA	-15	NA	44506767	44512072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509479_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.55	chr7	+	1332	15	NNC	ENSMUSG00000002963.18	novel	2184	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.1163486696415	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCACAGCCATCTTGC	9523	False	NA	11	True	AATAAA	-13	NA	44506770	44512070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44506979_44508147_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.56	chr7	+	1507	15	FSM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	42	1	5	0	multi-exon	FALSE	canonical	2	3	junction_5	63.3371686987626	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACAGCCATCTTGCTG	9560	False	NA	13	True	AATAAA	-15	NA	44506807	44512072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.57	chr7	+	1448	15	ISM	ENSMUSG00000002963.18	ENSMUST00000155050.5	1674	16	782	-9	-335	0	3prime_fragment	FALSE	canonical	3	182	junction_8	25.3614684439339	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	NA	False	NA	15	True	AATAAA	-17	NA	44507584	44512074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.58	chr7	+	784	9	ISM	ENSMUSG00000002963.18	ENSMUST00000155050.5	1674	16	3482	-7	-7	0	3prime_fragment	FALSE	canonical	3	182	junction_2	31.8725489253684	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACAGCCATCTTGCTG	NA	False	NA	13	True	AATAAA	-15	NA	44510284	44512072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ES.30793.59	chr7	+	2362	3	Antisense	novelGene_ENSMUSG00000002968.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAAAACA	1599	False	NA	NA	False	NA	NA	NA	44535287	44540932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_44535329_44535595_44535697_44538712
ES.30793.6	chr7	+	810	3	NNC	ENSMUSG00000109511.2	novel	2722	2	NA	NA	-48	1022	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	493	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTCAGGATTGTA	239	False	NA	15	True	AATAAA	-17	NA	44465675	44481258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44477910_44478210_44480979
ES.30793.7	chr7	+	2524	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208172.2	715	2	-41	-1768	-41	0	multi-exon	FALSE	canonical	3	10	junction_1	0	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	246	False	NA	18	True	AATAAA	-18	NA	44465682	44480233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44465884_44477910
ES.30793.9	chr7	+	3646	11	NNC	ENSMUSG00000074141.14	novel	2275	9	NA	NA	-57	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	4.27668095606862	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCTCACTTCCCTCCA	317	False	NA	6	True	AATAAA	-17	NA	44465753	44490229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44465908_44481539_44481606_44482017_44482973_44483059_44483517_44485927_44485962_44486054_44486291_44486799_44486913_44487412_44487615_44488574_44488644_44488747_44488885_44489006
ES.30794.1	chr7	-	1825	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	-10	1	-10	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	9676	False	NA	-1	True	AATAAA	-18	NA	44466092	44461680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44462945_44464412_44464707_44465825
ES.30795.1	chr7	-	3825	1	Antisense	novelGene_ENSMUSG00000109511.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCCATTCCAAGGGGA	9318	False	NA	NA	False	NA	NA	NA	44471463	44467638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_44467600_44471500
ES.30796.1	chr7	-	5132	1	Antisense	novelGene_ENSMUSG00000109511.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTCCATGATATCAA	4809	False	NA	NA	False	AATAAA	-34	NA	44480880	44475748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_44475700_44480900
ES.30797.1	chr7	-	2297	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	180	6273	0	5	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTGTAGTGTTCATTCAC	7883	False	NA	NA	False	NA	NA	NA	44498319	44490319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.10	chr7	-	2969	14	NIC	ENSMUSG00000038520.16	novel	2411	16	NA	NA	7	1	intron_retention	FALSE	canonical	3	189	junction_3	27.3407167590648	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7874	False	NA	-9	True	AATAAA	-16	NA	44498328	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.11	chr7	-	2261	16	FSM	ENSMUSG00000038520.16	ENSMUST00000139947.8	2411	16	20	130	-1	1	multi-exon	FALSE	canonical	3	189	junction_3	26.7432234407148	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7887	False	NA	-9	True	AATAAA	-16	NA	44498315	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.12	chr7	-	2080	16	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	60.8143257976459	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7878	False	NA	-9	True	AATAAA	-16	NA	44498324	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.13	chr7	-	2211	16	NIC	ENSMUSG00000038520.16	novel	2411	16	NA	NA	1	1	intron_retention	FALSE	canonical	2	3	junction_5	61.5769076485297	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7884	False	NA	-9	True	AATAAA	-16	NA	44498318	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492288_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.14	chr7	-	2079	16	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	60.9406268428542	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7849	False	NA	-9	True	AATAAA	-16	NA	44498353	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.15	chr7	-	2169	17	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	61.227929697157	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7874	False	NA	-9	True	AATAAA	-16	NA	44498328	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495501_44496180_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.16	chr7	-	555	3	NNC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	1041	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	4974	False	NA	-9	True	AATAAA	-16	NA	44491457	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490872_44490966_44491054_44491406
ES.30797.17	chr7	-	2262	16	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-6	1	intron_retention	FALSE	canonical	3	189	junction_4	26.5179184703476	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7877	False	NA	-9	True	AATAAA	-16	NA	44498325	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497959_44498272
ES.30797.18	chr7	-	2084	17	NNC	ENSMUSG00000038520.16	novel	2362	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	98.344718179219	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7883	False	NA	-9	True	AATAAA	-16	NA	44498319	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492288_44492418_44492534_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494753_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.19	chr7	-	3847	11	NIC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	-5	1	intron_retention	FALSE	canonical	3	201	junction_4	25.181143738917	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7878	False	NA	-9	True	AATAAA	-16	NA	44498324	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44492145_44492239_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.2	chr7	-	2193	17	FSM	ENSMUSG00000038520.16	ENSMUST00000145959.8	2362	17	179	-10	-5	10	multi-exon	FALSE	canonical	2	8	junction_3	59.8690954813082	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCAGGACACTTTGCT	7878	False	NA	0	True	AATAAA	-25	NA	44498324	44490445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.20	chr7	-	2763	15	NIC	ENSMUSG00000038520.16	novel	2362	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	189	junction_3	27.0653969910976	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7890	False	NA	-10	True	AATAAA	-15	NA	44498312	44490455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.21	chr7	-	3735	16	NIC	ENSMUSG00000038520.16	novel	2362	17	NA	NA	-28	0	intron_retention	FALSE	canonical	2	8	junction_3	79.8362212421293	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7671	False	NA	-10	True	AATAAA	-15	NA	44498531	44490455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494753_44495298_44495507_44496184_44497766_44497859_44497959_44498272
ES.30797.22	chr7	-	2293	17	NNC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_13	92.0946990534743	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7869	False	NA	-11	True	AATAAA	-14	NA	44498333	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491725_44492044_44492145_44492239_44492288_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44496838_44496908_44497693_44497766_44497859_44497959_44498272
ES.30797.23	chr7	-	956	5	ISM	ENSMUSG00000038520.16	ENSMUST00000208714.2	526	6	215	-514	215	0	3prime_fragment	FALSE	canonical	3	189	junction_3	25.1843205189261	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	4148	False	NA	-11	True	AATAAA	-14	NA	44492283	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239
ES.30797.24	chr7	-	2150	17	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	61.5248615906611	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7878	False	NA	-11	True	AATAAA	-14	NA	44498324	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497944_44498272
ES.30797.25	chr7	-	2065	17	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.6207845921325	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7880	False	NA	-11	True	AATAAA	-14	NA	44498322	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491463_44491663_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.26	chr7	-	2743	15	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	189	junction_4	25.9854747495439	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7884	False	NA	-11	True	AATAAA	-14	NA	44498318	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.27	chr7	-	2747	15	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	189	junction_4	27.3847305881901	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7885	False	NA	-11	True	AATAAA	-14	NA	44498317	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.28	chr7	-	3497	10	NIC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	189	junction_1	24.2262993510547	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGCTGGCTGGCATCAG	7886	False	NA	-11	True	AATAAA	-14	NA	44498316	44490456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44491725_44492044_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.29	chr7	-	4838	8	NIC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	201	junction_3	26.0846346201227	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCGCTGGCTGGCATC	7877	False	NA	-13	True	AATAAA	-12	NA	44498325	44490458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44493612_44493694_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.3	chr7	-	2363	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	-12	6399	-8	10	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATCAGGACACTTTGCT	7691	False	NA	0	True	AATAAA	-25	NA	44498511	44490445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.4	chr7	-	1286	11	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	95.7530156183083	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGGCATCAGGACACT	7877	False	NA	-5	True	AATAAA	-20	NA	44498325	44490450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492288_44492851_44492951_44493507_44493612_44497678_44497766_44497859_44497959_44498272
ES.30797.5	chr7	-	2318	17	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-5	5	intron_retention	FALSE	canonical	0	0	junction_13	79.1029540772657	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGGCATCAGGACACT	7878	False	NA	-5	True	AATAAA	-20	NA	44498324	44490450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44496838_44496908_44497693_44497766_44497859_44497959_44498272
ES.30797.6	chr7	-	4869	8	NIC	ENSMUSG00000038520.16	novel	2336	15	NA	NA	34	2	intron_retention	FALSE	canonical	3	201	junction_1	19.2999947129103	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTGGCTGGCATCAGGAC	7737	False	NA	-8	True	AATAAA	-17	NA	44498465	44490453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44493612_44493694_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.7	chr7	-	2685	16	NIC	ENSMUSG00000038520.16	novel	2362	17	NA	NA	0	1	intron_retention	FALSE	canonical	2	8	junction_3	61.803847417095	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7883	False	NA	-9	True	AATAAA	-16	NA	44498319	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30797.8	chr7	-	1445	12	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	73.5704531061753	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7878	False	NA	-9	True	AATAAA	-16	NA	44498324	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44497680_44497766_44497859_44497959_44498272
ES.30797.9	chr7	-	2150	17	NNC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	61.1533676505227	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTGGCTGGCATCAGGA	7883	False	NA	-9	True	AATAAA	-16	NA	44498319	44490454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494447_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ES.30798.1	chr7	-	2574	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-36	4	intron_retention	FALSE	canonical	3	715	junction_6	42.6240542417072	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTCCCTGCTTGTGTC	5404	False	NA	-4	True	AATAAA	-19	NA	44519248	44512486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.10	chr7	-	3919	8	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	760	junction_6	32.3854338635537	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5438	False	NA	-8	True	AATAAA	-15	NA	44519214	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.103	chr7	-	2230	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	223.613357368807	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6991	False	NA	-13	True	AATAAA	-10	NA	44541800	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541654
ES.30798.104	chr7	-	2096	17	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	286.825622112112	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6992	False	NA	-13	True	AATAAA	-10	NA	44541799	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529427_44529680_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.107	chr7	-	4825	13	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	744	junction_4	66.86818501101	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6954	False	NA	-13	True	AATAAA	-10	NA	44541837	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.108	chr7	-	2482	19	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	283.594046717017	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6965	False	NA	-13	True	AATAAA	-10	NA	44541826	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538891_44541206_44541332_44541522_44541569_44541654
ES.30798.109	chr7	-	2387	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	744	junction_8	67.6386307889212	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6953	False	NA	-13	True	AATAAA	-10	NA	44541838	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.11	chr7	-	3795	8	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	138	0	intron_retention	FALSE	canonical	3	742	junction_2	39.8742922654869	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5578	False	NA	-8	True	AATAAA	-15	NA	44519074	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44516700_44516798_44516937_44518774
ES.30798.112	chr7	-	2313	18	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	220.279470179813	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6950	False	NA	-13	True	AATAAA	-10	NA	44541841	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533668_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.113	chr7	-	2206	17	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	286.825622112112	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6979	False	NA	-13	True	AATAAA	-10	NA	44541812	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529523_44529679_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.114	chr7	-	2292	16	FSM	ENSMUSG00000002968.10	ENSMUST00000207278.2	2287	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	12	junction_15	290.277384582402	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6943	False	NA	-13	True	AATAAA	-10	NA	44541848	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
ES.30798.117	chr7	-	2395	19	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	320.289375332085	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6985	False	NA	-13	True	AATAAA	-10	NA	44541806	44528814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44531780_44531891_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.119	chr7	-	2522	19	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_16	282.818399177953	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAATGCCCGGCTCCCGT	6964	False	NA	-14	True	AATAAA	-9	NA	44541827	44528815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538931_44541206_44541332_44541522_44541569_44541654
ES.30798.12	chr7	-	2897	5	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-14	0	intron_retention	FALSE	canonical	1	3	junction_2	346.967127405465	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5426	False	NA	-9	True	AATAAA	-14	NA	44519226	44512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44514427_44514895_44515052_44516483_44516700_44516798_44516937_44518774
ES.30798.121	chr7	-	342	1	Genic_Genomic	ENSMUSG00000002968.10	novel	NA	NA	NA	NA	123	150	mono-exon	FALSE	NA	NA	NA	NA	NA	840	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	865	False	NA	NA	False	NA	NA	NA	44533440	44533098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_44533100_44533400
ES.30798.122	chr7	-	177	1	NIC	ENSMUSG00000002968.10	novel	378	3	NA	NA	124	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	840	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	866	False	NA	NA	False	NA	NA	NA	44533439	44533262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44533300_44533400
ES.30798.123	chr7	-	1409	11	NIC	ENSMUSG00000002968.10	novel	794	7	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	273.329270295005	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	6949	False	NA	NA	False	NA	NA	NA	44541842	44533263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44533389_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.13	chr7	-	3733	8	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	181	0	intron_retention	FALSE	canonical	3	760	junction_6	32.0611660322412	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5621	False	NA	-9	True	AATAAA	-14	NA	44519031	44512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.14	chr7	-	3065	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-30	0	intron_retention	FALSE	canonical	3	386	junction_1	130.631798068719	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	7744	False	NA	-9	True	AATAAA	-14	NA	44516908	44512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798
ES.30798.16	chr7	-	3587	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	128	0	intron_retention	FALSE	canonical	3	742	junction_2	36.4661182164729	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5568	False	NA	-9	True	AATAAA	-14	NA	44519084	44512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.17	chr7	-	3711	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	128	0	intron_retention	FALSE	canonical	3	760	junction_7	32.4807635378234	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5568	False	NA	-9	True	AATAAA	-14	NA	44519084	44512491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.18	chr7	-	2347	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	125	0	intron_retention	FALSE	canonical	3	386	junction_1	128.915825250432	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5565	False	NA	-10	True	AATAAA	-13	NA	44519087	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.19	chr7	-	1558	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	248.045616972309	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5472	False	NA	-10	True	AATAAA	-13	NA	44519180	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.2	chr7	-	1722	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTCCCTGCTTGTGTC	5422	False	NA	-4	True	AATAAA	-19	NA	44519230	44512486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.20	chr7	-	3933	6	NIC	ENSMUSG00000038502.18	novel	817	9	NA	NA	147	0	intron_retention	FALSE	canonical	3	760	junction_4	35.709942593065	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5587	False	NA	-10	True	AATAAA	-13	NA	44519065	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44514094_44514185_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.21	chr7	-	2006	1	NIC	ENSMUSG00000038502.18	novel	2932	5	NA	NA	-94	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	NA	False	NA	-10	True	AATAAA	-13	NA	44514498	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512500_44514500
ES.30798.22	chr7	-	1504	13	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_11	234.545778521427	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5577	False	NA	-10	True	AATAAA	-13	NA	44519075	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516643_44516798_44516937_44518774
ES.30798.23	chr7	-	2338	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	386	junction_1	122.965627126224	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5450	False	NA	-10	True	AATAAA	-13	NA	44519202	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.25	chr7	-	3585	28	Fusion	ENSMUSG00000002968.10_ENSMUSG00000038502.18	novel	2678	17	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_11	179.817976857425	1353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	7002	False	NA	-10	True	AATAAA	-13	NA	44541789	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.27	chr7	-	2315	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	51	0	intron_retention	FALSE	canonical	1	1	junction_6	267.659181609748	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5491	False	NA	-10	True	AATAAA	-13	NA	44519161	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516616_44516700_44516798_44516937_44518774
ES.30798.28	chr7	-	3872	7	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	84	0	intron_retention	FALSE	canonical	3	742	junction_1	40.392518559203	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5524	False	NA	-10	True	AATAAA	-13	NA	44519128	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44513912_44514035_44514094_44514185_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.29	chr7	-	3558	10	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	91	0	intron_retention	FALSE	canonical	1	15	junction_4	265.893787390453	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5531	False	NA	-10	True	AATAAA	-13	NA	44519121	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512619_44512802_44512869_44512958_44514094_44514185_44514255_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.3	chr7	-	2129	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	-243	-3	-243	2	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCCTCCCTGCTTGTG	5197	False	NA	-6	True	AATAAA	-17	NA	44519455	44512488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.30	chr7	-	3903	6	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-138	0	intron_retention	FALSE	canonical	3	760	junction_4	35.0690746955206	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5684	False	NA	-10	True	AATAAA	-13	NA	44518968	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514260_44514336_44514427_44514895_44516700_44516798_44516937_44518774
ES.30798.32	chr7	-	3848	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-57	0	intron_retention	FALSE	canonical	3	742	junction_2	35.957440120231	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5383	False	NA	-10	True	AATAAA	-13	NA	44519269	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.34	chr7	-	1981	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	715	junction_6	40.0049996875391	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5418	False	NA	-10	True	AATAAA	-13	NA	44519234	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.35	chr7	-	2606	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	0	intron_retention	FALSE	canonical	3	715	junction_4	41.4561138434369	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5567	False	NA	-10	True	AATAAA	-13	NA	44519085	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.37	chr7	-	1611	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	245.966032728502	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5422	False	NA	-10	True	AATAAA	-13	NA	44519230	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.38	chr7	-	4236	4	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-352	0	intron_retention	FALSE	canonical	3	760	junction_3	17.1723291631883	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	7266	False	NA	-10	True	AATAAA	-13	NA	44517386	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514427_44514895_44516700_44516798
ES.30798.39	chr7	-	1480	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	128	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	244.971275091254	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5568	False	NA	-10	True	AATAAA	-13	NA	44519084	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.4	chr7	-	4010	7	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	-18	0	intron_retention	FALSE	canonical	3	760	junction_5	32.6326353347211	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5422	False	NA	-8	True	AATAAA	-15	NA	44519230	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.40	chr7	-	3735	8	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	131	0	intron_retention	FALSE	canonical	3	742	junction_2	37.4688986673873	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5571	False	NA	-10	True	AATAAA	-13	NA	44519081	44512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.42	chr7	-	1736	12	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	137	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	230.63172317688	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGTCCCTCCCTGC	5577	False	NA	-11	True	AATAAA	-12	NA	44519075	44512493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512869_44512958_44513149_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.44	chr7	-	3682	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	-1	intron_retention	FALSE	canonical	3	742	junction_1	38.6490620843508	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGTCCCTCCCTGC	5561	False	NA	-11	True	AATAAA	-12	NA	44519091	44512493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.45	chr7	-	3109	9	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	127	-1	intron_retention	FALSE	canonical	0	0	junction_3	266.392772752941	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGTCCCTCCCTGC	5567	False	NA	-11	True	AATAAA	-12	NA	44519085	44512493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512869_44512958_44513157_44513806_44513933_44514035_44514094_44514185_44514427_44514895_44516342_44516483_44516700_44516798_44516937_44518774
ES.30798.46	chr7	-	3074	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	65	-2	intron_retention	FALSE	canonical	3	742	junction_3	34.7470577846723	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5505	False	NA	-12	True	AATAAA	-11	NA	44519147	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.47	chr7	-	1176	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	133	-2	combination_of_known_splicesites	FALSE	canonical	2	31	junction_8	270.604762522761	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5573	False	NA	-12	True	AATAAA	-11	NA	44519079	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44518774
ES.30798.48	chr7	-	1881	12	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_2	230.63172317688	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5450	False	NA	-12	True	AATAAA	-11	NA	44519202	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512869_44512958_44513157_44513795_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.50	chr7	-	2507	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	147	-2	intron_retention	FALSE	canonical	3	715	junction_5	41.6866618689693	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5587	False	NA	-12	True	AATAAA	-11	NA	44519065	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.51	chr7	-	3660	9	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	-2	intron_retention	FALSE	canonical	0	0	junction_3	262.226971105186	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5561	False	NA	-12	True	AATAAA	-11	NA	44519091	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512869_44512958_44513912_44514035_44514086_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.52	chr7	-	3699	7	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	131	-2	intron_retention	FALSE	canonical	0	0	junction_5	304.584233924797	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	5571	False	NA	-12	True	AATAAA	-11	NA	44519081	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516798_44516937_44518774
ES.30798.53	chr7	-	4175	7	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	595	-2	intron_retention	FALSE	canonical	0	0	junction_1	295.029235839433	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	6766	False	NA	-12	True	AATAAA	-11	NA	44517886	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512958_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798
ES.30798.54	chr7	-	4356	26	Fusion	ENSMUSG00000002968.10_ENSMUSG00000038502.18	novel	2678	17	NA	NA	4	-2	intron_retention	FALSE	canonical	1	3	junction_9	186.191402594212	1353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGCTGTCCCTCCCTG	6954	False	NA	-12	True	AATAAA	-11	NA	44541837	44512494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516700_44516798_44516937_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.55	chr7	-	4421	3	NIC	ENSMUSG00000038502.18	novel	897	4	NA	NA	-443	-3	intron_retention	FALSE	canonical	3	783	junction_2	27	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTTGCTGTCCCTCCCT	7175	False	NA	-13	True	AATAAA	-10	NA	44517477	44512495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44514094_44514185_44514427_44514895
ES.30798.56	chr7	-	166	1	Intergenic	novelGene_25386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCCAAAATT	9899	False	NA	NA	False	NA	NA	NA	44521493	44521327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44521300_44521500
ES.30798.57	chr7	-	2656	17	NNC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	4	1258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.32308915026	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	6954	False	NA	NA	False	NA	NA	NA	44541837	44524930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44525470_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.58	chr7	-	4005	18	FSM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	-308	-4	13	4	multi-exon	FALSE	canonical	3	62	junction_1	207.582576223432	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGTGGGCTTTCCTTCT	9942	False	NA	0	True	NA	NA	NA	44542123	44526184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.59	chr7	-	3648	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	279.794783893035	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6949	False	NA	-4	True	NA	NA	NA	44541842	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.6	chr7	-	1699	12	NNC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	128	0	intron_retention	FALSE	canonical	1	20	junction_10	225.135661581417	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5568	False	NA	-8	True	AATAAA	-15	NA	44519084	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516643_44516798_44516937_44518774
ES.30798.60	chr7	-	5799	14	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-1	0	intron_retention	FALSE	canonical	3	744	junction_5	67.4215739882514	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6959	False	NA	-4	True	NA	NA	NA	44541832	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44530536_44532182_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.61	chr7	-	5418	16	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	62	junction_1	216.966500230386	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6971	False	NA	-4	True	NA	NA	NA	44541820	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.62	chr7	-	5279	16	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	109	junction_2	209.73630004259	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6954	False	NA	-4	True	NA	NA	NA	44541837	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.63	chr7	-	4943	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	295	-2619	0	0	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6950	False	NA	-4	True	NA	NA	NA	44541841	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.64	chr7	-	3155	15	NNC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	317.175480947512	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6969	False	NA	-4	True	NA	NA	NA	44541822	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533594_44534816_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.65	chr7	-	3788	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	62	junction_1	212.764532038942	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6954	False	NA	-4	True	NA	NA	NA	44541837	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.66	chr7	-	3936	19	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	326.140941281905	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6964	False	NA	-4	True	NA	NA	NA	44541827	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538942_44541206_44541332_44541522_44541569_44541654
ES.30798.68	chr7	-	3815	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	213.948655858713	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6950	False	NA	-4	True	NA	NA	NA	44541841	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.69	chr7	-	4862	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6959	False	NA	-4	True	NA	NA	NA	44541832	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.7	chr7	-	1739	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	38	0	intron_retention	FALSE	canonical	3	386	junction_1	120.334725997909	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5478	False	NA	-8	True	AATAAA	-15	NA	44519174	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.70	chr7	-	3488	17	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	225.974201721679	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	7003	False	NA	-4	True	NA	NA	NA	44541788	44526188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.71	chr7	-	3681	16	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	341.045933693526	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGGCCGTGGGCTTT	6954	False	NA	-6	True	NA	NA	NA	44541837	44526190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
ES.30798.73	chr7	-	3689	18	NNC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	343.617776709221	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATCTTTCTGGCCGTGGG	6991	False	NA	-10	True	NA	NA	NA	44541800	44526194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44527715_44529350_44529529_44529675_44529895_44530109_44530199_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.76	chr7	-	3892	18	NNC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	-11	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	298.32827185077	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGTGTTTGTGTTGTA	6990	False	NA	-2	True	NA	NA	NA	44541801	44526253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44527985_44529350_44529529_44529675_44529903_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.77	chr7	-	3729	19	NNC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	1	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.32462141966	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATCCGTGTTTGTGTTG	6961	False	NA	-4	True	NA	NA	NA	44541830	44526255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44527715_44528667_44528756_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.78	chr7	-	3678	18	NIC	ENSMUSG00000002968.10	novel	3693	18	NA	NA	0	-70	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	340.85886839877	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCATCCGTGTTTGTG	6949	False	NA	-7	True	NA	NA	NA	44541842	44526258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44527715_44529350_44529529_44529675_44529889_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541488_44541569_44541654
ES.30798.8	chr7	-	1651	11	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	128	0	intron_retention	FALSE	canonical	3	13	junction_2	237.909982976755	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5568	False	NA	-8	True	AATAAA	-15	NA	44519084	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512869_44512958_44513157_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.82	chr7	-	2358	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	261	0	-32	0	multi-exon	FALSE	canonical	3	744	junction_9	66.5493546850497	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCCCGTGACTGACG	6916	False	NA	-6	True	AATAAA	-17	NA	44541875	44528807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.83	chr7	-	2311	18	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	221.750194563449	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6955	False	NA	-8	True	AATAAA	-15	NA	44541836	44528809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529889_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.84	chr7	-	2742	15	NIC	ENSMUSG00000002968.10	novel	2287	16	NA	NA	0	-2	intron_retention	FALSE	canonical	3	12	junction_14	235.875529265167	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6950	False	NA	-8	True	AATAAA	-15	NA	44541841	44528809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
ES.30798.85	chr7	-	3101	15	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	744	junction_6	65.5511951353556	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6963	False	NA	-8	True	AATAAA	-15	NA	44541828	44528809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.86	chr7	-	2251	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	203.468018064265	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6949	False	NA	-8	True	AATAAA	-15	NA	44541842	44528809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.87	chr7	-	3354	11	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	6	-2	intron_retention	FALSE	canonical	3	109	junction_2	251.282390946918	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCCCGTGACTGA	6982	False	NA	-8	True	AATAAA	-15	NA	44541809	44528809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44529895_44530346_44530536_44532182_44532609_44533542_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.88	chr7	-	2943	15	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	9	3	intron_retention	FALSE	canonical	3	175	junction_6	196.062620150829	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6985	False	NA	-10	True	AATAAA	-13	NA	44541806	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.89	chr7	-	2718	17	FSM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	-37	-3	-2	3	multi-exon	FALSE	canonical	3	744	junction_8	64.3087948398195	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6964	False	NA	-10	True	AATAAA	-13	NA	44541827	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.9	chr7	-	3602	9	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	131	0	intron_retention	FALSE	canonical	3	386	junction_1	140.413451990897	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTCCCTCCCTGCTTG	5571	False	NA	-8	True	AATAAA	-15	NA	44519081	44512490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44512619_44512802_44512869_44512958_44514094_44514185_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ES.30798.90	chr7	-	1495	13	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	341.319864643123	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6955	False	NA	-10	True	AATAAA	-13	NA	44541836	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533597_44538890_44538942_44541206_44541332_44541522_44541569_44541654
ES.30798.92	chr7	-	2535	19	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	278.978344440329	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6966	False	NA	-10	True	AATAAA	-13	NA	44541825	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538942_44541206_44541332_44541522_44541569_44541654
ES.30798.93	chr7	-	2331	17	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	272.122100352029	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6982	False	NA	-10	True	AATAAA	-13	NA	44541809	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
ES.30798.94	chr7	-	2584	15	NIC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	-4	3	intron_retention	FALSE	canonical	3	744	junction_6	70.867510762215	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCGGCTCCCGTGACT	6956	False	NA	-10	True	AATAAA	-13	NA	44541835	44528811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44528939_44529350_44529529_44529675_44530063_44530346_44530536_44532182_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.95	chr7	-	4530	14	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	744	junction_5	66.2856468796113	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCCGGCTCCCGTGAC	6967	False	NA	-11	True	AATAAA	-12	NA	44541824	44528812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44530063_44530346_44532291_44532391_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.96	chr7	-	2822	16	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	-5	2	intron_retention	FALSE	canonical	3	744	junction_7	65.6632486420084	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCCGGCTCCCGTGAC	6955	False	NA	-11	True	AATAAA	-12	NA	44541836	44528812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.97	chr7	-	2658	16	NIC	ENSMUSG00000002968.10	novel	2678	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	109	junction_2	209.73630004259	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCCGGCTCCCGTGA	6950	False	NA	-12	True	AATAAA	-11	NA	44541841	44528813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44529529_44529675_44529895_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30798.99	chr7	-	2297	18	NNC	ENSMUSG00000002968.10	novel	2619	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	221.525600542018	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCCGGCTCCCGTGA	6950	False	NA	-12	True	AATAAA	-11	NA	44541841	44528813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44528939_44529350_44529529_44529675_44529874_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ES.30799.1	chr7	+	2741	8	FSM	ENSMUSG00000011658.17	ENSMUST00000207480.2	2717	8	-25	1	-11	-1	multi-exon	FALSE	canonical	3	96	junction_1	10.3903408834104	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545491	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548125_44548199_44548296_44548408_44548811_44549556
ES.30799.10	chr7	+	2831	7	NIC	ENSMUSG00000011658.17	novel	1698	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_1	8.78287475083693	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545517	44550048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548663_44548735_44548811_44549556
ES.30799.11	chr7	+	2903	6	NIC	ENSMUSG00000011658.17	novel	2717	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	96	junction_1	9.32523458149981	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545517	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548811_44549556
ES.30799.12	chr7	+	1487	2	ISM	ENSMUSG00000011658.17	ENSMUST00000209132.2	853	5	4	59	1	-59	intron_retention	FALSE	canonical	3	96	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTGCCTCCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	44545520	44547191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44545787_44545970
ES.30799.13	chr7	+	1232	10	NNC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	42.1742417438259	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCGGGCTCTTTGCTGT	NA	False	NA	24	True	AATAAA	-35	NA	44545523	44550046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44545542_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.14	chr7	+	1550	9	NIC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	34	junction_5	27.6586333718787	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545533	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548663_44548735_44548811_44549556
ES.30799.15	chr7	+	3545	6	NIC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	8	8	intron_retention	FALSE	canonical	3	96	junction_1	9.49526197637537	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCCCCCACCCCGGGC	NA	False	NA	14	True	AATAAA	-25	NA	44545537	44550036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548663_44548735
ES.30799.16	chr7	+	2050	4	NIC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	336	-1	intron_retention	FALSE	canonical	3	110	junction_2	4.49691252107735	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44547056	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44548296_44548408_44548516_44548597_44548811_44549556
ES.30799.17	chr7	+	1438	5	NIC	ENSMUSG00000011658.17	novel	1140	10	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	97	junction_1	8.97217922246318	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44547593	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44548125_44548199_44548296_44548408_44548516_44548597_44548811_44549556
ES.30799.2	chr7	+	3293	9	NIC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	-4	638	intron_retention	FALSE	canonical	3	96	junction_1	8.1700673191841	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGTGGTTGGCTTTGAAG	NA	False	NA	NA	False	GATAAA	-43	NA	44545498	44550686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.3	chr7	+	1705	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	1	-8	1	8	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTGTCGCCACTGGA	NA	False	NA	34	True	AATAAA	-45	NA	44545503	44550056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.4	chr7	+	2646	9	NIC	ENSMUSG00000011658.17	novel	1453	10	NA	NA	1	3	intron_retention	FALSE	canonical	3	96	junction_1	8.1700673191841	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCTCTTTGCTGTCGCCA	NA	False	NA	29	True	AATAAA	-40	NA	44545510	44550051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.5	chr7	+	1446	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	11	241	-3	-31	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGTCTCTCTGTTTATTC	NA	False	NA	NA	False	NA	NA	NA	44545513	44549807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.6	chr7	+	1767	10	NIC	ENSMUSG00000011658.17	novel	1698	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	81	junction_5	13.4173280260276	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545514	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548663_44548735_44548811_44549556
ES.30799.7	chr7	+	1485	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-13	-19	0	-1	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545516	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ES.30799.8	chr7	+	2385	7	ISM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	-12	-19	1	-1	intron_retention	FALSE	canonical	3	34	junction_5	31.4041752355037	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	False	NA	25	True	AATAAA	-36	NA	44545517	44550047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408
ES.30799.9	chr7	+	2976	6	NIC	ENSMUSG00000011658.17	novel	2717	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	115	junction_1	2.99332590941915	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGGCTCTTTGCTGTCGC	NA	False	NA	27	True	AATAAA	-38	NA	44545517	44550049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44546093_44546338_44546424_44546684_44546754_44546943_44548296_44548408_44548811_44549556
ES.308.1	chr1	+	517	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	1302	False	NA	NA	False	NA	NA	NA	37248048	37248565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37248000_37248600
ES.3080.1	chr10	-	177	1	Intergenic	novelGene_2403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGATGCTT	6914	False	NA	NA	False	NA	NA	NA	71152935	71152758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_71152800_71152900
ES.30800.10	chr7	-	4546	21	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_19	151.42073834188	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578913	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565824_44565895_44578703
ES.30800.11	chr7	-	3389	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	225.402173650962	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578855	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44554342_44554414_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.12	chr7	-	3309	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.606789248144	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578855	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556400_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.13	chr7	-	3330	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.46358196522	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578877	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550721_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.14	chr7	-	4171	21	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	200.643315363358	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578855	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550861_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.15	chr7	-	3395	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.114346506018	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578911	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552376_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.18	chr7	-	4659	20	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	560	junction_16	47.6670121186689	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578913	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550240_44550410_44550731_44550807_44550925_44551014_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.19	chr7	-	3779	20	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_5	154.629715871403	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578911	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552481_44552567_44552625_44553164_44553581_44553660_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.20	chr7	-	4761	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_5	147.390929733822	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578912	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.21	chr7	-	4339	21	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_5	151.122293193294	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578856	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.22	chr7	-	4863	20	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	560	junction_16	49.0568667699571	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578913	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550240_44550410_44550546_44550660_44550925_44551014_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.23	chr7	-	3330	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	228.392934751993	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578911	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550861_44551014_44551137_44552170_44552263_44552376_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.24	chr7	-	3302	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.289146655667	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578904	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550861_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.26	chr7	-	3491	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_5	229.989583846065	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578867	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44554175_44554342_44554418_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.28	chr7	-	3454	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	199.045238080998	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578916	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565826_44565895_44578703
ES.30800.29	chr7	-	5072	18	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	163.537282925253	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578916	44549797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550906_44551014_44552481_44552567_44552625_44553164_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.32	chr7	-	4393	21	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	202.80300786724	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTATTGACTGCCCACCC	NA	False	NA	-4	True	AATAAA	-23	NA	44578889	44549798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550861_44551025_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.34	chr7	-	3523	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	144.332162883504	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	-5	True	AATAAA	-22	NA	44578892	44549799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.35	chr7	-	3457	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	147.57981045358	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	-5	True	AATAAA	-22	NA	44578910	44549799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.36	chr7	-	3457	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	223.313676494837	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	-5	True	AATAAA	-22	NA	44578931	44549799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44552885_44552952_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.38	chr7	-	3637	21	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-35	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	151.215210875097	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	-5	True	AATAAA	-22	NA	44578955	44549799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.39	chr7	-	3891	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	147.836613865081	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATTGACTGCCCACC	NA	False	NA	-5	True	AATAAA	-22	NA	44578852	44549799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551808_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.4	chr7	-	3547	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-162	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.442358888666	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACTGCCCACCCTGAG	NA	False	NA	0	True	AATAAA	-27	NA	44579082	44549794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.42	chr7	-	6737	15	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	177.739777684762	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTATTGACTGCCCA	NA	False	NA	-7	True	AATAAA	-20	NA	44578912	44549801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550925_44551014_44552481_44552567_44553581_44553660_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565826_44565895_44578703
ES.30800.43	chr7	-	3455	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-13	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	198.933460086407	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTATTGACTGCCCA	NA	False	NA	-7	True	AATAAA	-20	NA	44578863	44549801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565826_44565895_44578703
ES.30800.47	chr7	-	3332	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.50734546031	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTATTGACTGCCC	NA	False	NA	-8	True	AATAAA	-19	NA	44578873	44549802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551143_44552175_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565824_44565895_44578703
ES.30800.48	chr7	-	5562	18	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	517	-5	intron_retention	FALSE	canonical	0	0	junction_14	213.877855385314	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTATTGACTGCCC	NA	False	NA	-8	True	AATAAA	-19	NA	44565641	44549802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556407_44557147_44558799_44559122_44559253_44565264_44565459_44565586
ES.30800.49	chr7	-	3294	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.359474460489	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTATTGACTGCCC	NA	False	NA	-8	True	AATAAA	-19	NA	44578912	44549802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555183_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.50	chr7	-	3144	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	188.587887480474	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAGCTATTGACTGCCC	NA	False	NA	-8	True	AATAAA	-19	NA	44578855	44549802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44549977_44550144_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.54	chr7	-	3824	21	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	10	5	intron_retention	FALSE	non_canonical	0	0	junction_5	151.122293193294	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAGCTATTGACTGCC	NA	False	NA	-9	True	AATAAA	-18	NA	44578904	44549803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.55	chr7	-	3360	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.529629772701	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCAGCTATTGACTGCC	NA	False	NA	-9	True	AATAAA	-18	NA	44578909	44549803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555283_44555490_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.56	chr7	-	4586	20	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	14	4	intron_retention	FALSE	canonical	3	560	junction_16	49.614692667917	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCCAGCTATTGACTGC	NA	False	NA	-10	True	AATAAA	-17	NA	44578872	44549804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.61	chr7	-	3334	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	190.627107765071	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCCCAGCTATTGACT	NA	False	NA	-12	True	AATAAA	-15	NA	44578923	44549806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550452_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.63	chr7	-	3452	23	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	257.714702274812	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578913	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550861_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44554342_44554418_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.64	chr7	-	3325	22	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	199.079685273097	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578991	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.65	chr7	-	3203	23	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.642775148104	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578791	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552222_44552395_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.68	chr7	-	3203	19	NIC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	155.760816955887	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578912	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550546_44550660_44550731_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.7	chr7	-	3308	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.581055578601	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGACTGCCCACCCTG	NA	False	NA	-2	True	AATAAA	-25	NA	44578851	44549796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555627_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.70	chr7	-	3386	23	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	193.516570926473	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578905	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565489_44565586_44565730_44565825_44565895_44578703
ES.30800.71	chr7	-	3235	23	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.50734546031	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578877	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565632_44565820_44565895_44578703
ES.30800.72	chr7	-	3377	22	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	197.690382994077	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578855	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550861_44551014_44551137_44552170_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.73	chr7	-	3294	23	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.188756196246	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578830	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550397_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.74	chr7	-	5855	19	NNC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_5	211.141408644644	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578903	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44549977_44550144_44550240_44550410_44550546_44550660_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553581_44553660_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.75	chr7	-	3503	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	224.082789183635	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578856	44549808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44552885_44553082_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.78	chr7	-	3406	23	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	230.339854013819	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578913	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558788_44559122_44559253_44565264_44565459_44565586_44565730_44565824_44565895_44578703
ES.30800.79	chr7	-	2355	9	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-158	-1	intron_retention	FALSE	canonical	3	615	junction_3	49.7995983919549	808	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	462	False	NA	-15	True	AATAAA	-12	NA	44553466	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412
ES.30800.80	chr7	-	3507	23	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	227.350495785438	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578904	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44552885_44552952_44553164_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.81	chr7	-	3715	22	NNC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	147.75706297793	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578888	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.82	chr7	-	2969	21	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	266.205648888223	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578859	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44552885_44552952_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44578703
ES.30800.83	chr7	-	3316	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	225.885010142735	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578913	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44549892_44549937_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565826_44565895_44578703
ES.30800.85	chr7	-	3137	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	222.092012471815	810	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTACCCCAGCTATTG	NA	False	NA	-15	True	AATAAA	-12	NA	44578855	44549809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44550019_44550144_44550240_44550452_44550546_44550660_44550731_44550807_44550925_44551014_44551137_44552170_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30800.91	chr7	-	4948	19	NIC	ENSMUSG00000060279.15	novel	3376	23	NA	NA	8	-4	intron_retention	FALSE	canonical	3	560	junction_15	49.9735732631894	810	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTAATATTACCCCAGCTA	NA	False	NA	-18	True	AATAAA	-9	NA	44578878	44549812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44550240_44550410_44550546_44550660_44550925_44551014_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ES.30801.1	chr7	-	223	1	Intergenic	novelGene_25387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGATTATGAAGATGT	NA	False	NA	32	True	NA	NA	NA	44585473	44585250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44585200_44585500
ES.30802.1	chr7	+	1849	11	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	5	-2	combination_of_known_junctions	TRUE	canonical	1	2	junction_2	3.77359245282264	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTCTGACAACTATAC	1422	False	NA	NA	False	AATAAA	-18	NA	44592650	44607454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44592878_44593205_44593429_44600202_44600299_44600462_44600547_44601286_44601371_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44606012_44606977_44607146_44607279
ES.30802.2	chr7	+	2224	6	NIC	ENSMUSG00000059891.15	novel	1843	11	NA	NA	-3314	-2	intron_retention	FALSE	canonical	0	0	junction_1	5.16139516022558	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTCTGACAACTATAC	2041	False	NA	NA	False	AATAAA	-18	NA	44600423	44607454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44600547_44601969_44602257_44603170_44603366_44603737_44603912_44605875_44607146_44607279
ES.30803.1	chr7	+	3393	1	Genic_Genomic	ENSMUSG00000109111.2	novel	NA	NA	NA	NA	-363	2306	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCAGGAAGGTCTGGG	NA	False	NA	NA	False	AAAACA	-7	NA	44622640	44626033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_44622600_44626000
ES.30804.1	chr7	+	3448	2	Antisense	novelGene_ENSMUSG00000109324.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44627040	44632324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_44630431_44632266
ES.30805.1	chr7	+	1077	1	Intergenic	novelGene_25388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCACTCTGTAGACCAGG	NA	False	NA	NA	False	NA	NA	NA	44633596	44634673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44633600_44634700
ES.30806.1	chr7	-	3216	21	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-21	888	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.9237764056823	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGATCAGTGTT	2716	False	NA	NA	False	TTTAAA	-19	NA	44624223	44607907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44608121_44608430_44608596_44608812_44609100_44609267_44609361_44609473_44609588_44610181_44610434_44610942_44611070_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614710_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.10	chr7	-	2959	18	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_4	24.0818960271606	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2730	False	NA	-2	True	AATAAA	-20	NA	44624209	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610463_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.11	chr7	-	3505	18	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_8	27.2061208256639	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2732	False	NA	-2	True	AATAAA	-20	NA	44624207	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614710_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.12	chr7	-	3519	17	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-14	0	intron_retention	FALSE	canonical	3	39	junction_11	18.7649940047952	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2650	False	NA	-2	True	AATAAA	-20	NA	44624289	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.13	chr7	-	3619	28	Fusion	ENSMUSG00000109324.3_ENSMUSG00000007783.11	novel	2793	19	NA	NA	-10	0	multi-exon	FALSE	canonical	0	0	junction_18	1632.88266227299	1190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	NA	False	NA	-2	True	AATAAA	-20	NA	44635759	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44626319_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.15	chr7	-	2998	11	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	2533	0	intron_retention	FALSE	canonical	2	5	junction_10	23.3240219516275	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	6971	False	NA	-2	True	AATAAA	-20	NA	44619968	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675
ES.30806.16	chr7	-	2855	19	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	21.9736093114636	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2755	False	NA	-2	True	AATAAA	-20	NA	44624184	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.17	chr7	-	2731	19	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	22.3954360429878	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2710	False	NA	-2	True	AATAAA	-20	NA	44624229	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614675_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.19	chr7	-	3566	16	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	39	junction_10	19.2902969276151	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2716	False	NA	-2	True	AATAAA	-20	NA	44624223	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44609100_44609267_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.2	chr7	-	4856	20	NNC	ENSMUSG00000007783.11	novel	2716	19	NA	NA	-7	888	intron_retention	FALSE	canonical	0	0	junction_11	34.1896292451737	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGGATCAGTGTT	2730	False	NA	NA	False	TTTAAA	-19	NA	44624209	44607907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44608121_44608430_44608596_44608812_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611070_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614710_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619675_44619967_44620041_44620144_44620659_44622574_44623150_44623305_44624020
ES.30806.20	chr7	-	1293	6	ISM	ENSMUSG00000007783.11	ENSMUST00000211901.2	2633	12	5186	2	-1224	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	34.7712524939784	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCACTGTGCTTTTCTGC	NA	False	NA	-3	True	AATAAA	-19	NA	44611969	44608797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610434_44610942_44611075_44611569
ES.30806.21	chr7	-	3520	16	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	39	junction_10	19.1960644114592	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCACTGTGCTTTTCTGC	2734	False	NA	-3	True	AATAAA	-19	NA	44624205	44608797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.23	chr7	-	4308	14	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	12	junction_1	21.3019986839027	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCCACTGTGCTTTTCT	2728	False	NA	-5	True	AATAAA	-17	NA	44624211	44608799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44611070_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.24	chr7	-	3333	18	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-27	-6	intron_retention	FALSE	canonical	2	7	junction_8	23.0373549519773	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTATCCACTGTGCTTT	2710	False	NA	-8	True	AATAAA	-14	NA	44624229	44608802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614675_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.25	chr7	-	8451	8	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	43	junction_6	19.2724822331886	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAAGA	2728	False	NA	NA	False	NA	NA	NA	44624211	44609801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44611735_44612166_44612284_44613327_44613434_44614507_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.26	chr7	-	2075	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	72	0	14	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTGTTTGCGTGGTT	NA	False	NA	NA	False	NA	NA	NA	44635844	44625412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.27	chr7	-	1806	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	155	186	9	-186	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGGGCCATTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	44635761	44625598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.28	chr7	-	1521	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	-113	739	-37	30	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTTGCCTATCACTC	NA	False	NA	0	True	GGGGCT	-11	NA	44636029	44626151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.29	chr7	-	1370	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	155	-17	21	17	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGGTAGTTCTACTGTT	NA	False	NA	-13	True	AATAAA	-34	NA	44635837	44626164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ES.30806.3	chr7	-	3418	18	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-15	1	intron_retention	FALSE	canonical	3	39	junction_12	18.3561460248554	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGCTTTTCTGCGGG	2649	False	NA	0	True	AATAAA	-22	NA	44624290	44608794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.30	chr7	-	1938	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-11	2	intron_retention	FALSE	non_canonical	0	0	junction_9	1559.31515736877	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44635791	44626179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633499_44633558_44635706
ES.30806.31	chr7	-	2029	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-10	2	intron_retention	FALSE	canonical	3	165	junction_8	1409.75420324972	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44635790	44626179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633558_44635706
ES.30806.33	chr7	-	1580	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_9	1378.7867166462	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44635770	44626179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633300_44633499_44633558_44635706
ES.30806.36	chr7	-	3643	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-6	2	intron_retention	FALSE	canonical	3	165	junction_8	1401.64697656492	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44635755	44626179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44633194_44633558_44635706
ES.30806.38	chr7	-	1423	12	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-113	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1563.02667288991	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCGCCCTGGGGCTGG	NA	False	NA	-28	True	AATAAA	-19	NA	44636105	44626179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633499_44633558_44636015
ES.30806.39	chr7	-	1246	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1111.58030093741	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCTCGCCCTGGGGCTG	NA	False	NA	-29	True	AATAAA	-18	NA	44635788	44626180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627042_44627547_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.4	chr7	-	3008	17	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	23	0	intron_retention	FALSE	canonical	2	5	junction_12	22.8109588520518	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2763	False	NA	-2	True	AATAAA	-20	NA	44624176	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616329_44616481_44616557_44619675_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.40	chr7	-	1421	12	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1527.14858261678	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635796	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633499_44633558_44635706
ES.30806.43	chr7	-	1509	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_9	1576.77354429861	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635791	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633498_44633558_44635706
ES.30806.44	chr7	-	1629	11	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	165	junction_9	1344.93463038171	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635804	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633558_44635706
ES.30806.45	chr7	-	3485	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_9	1585.81250152721	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635763	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44633158_44633300_44633499_44633558_44635706
ES.30806.46	chr7	-	1772	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	245	junction_9	1047.17906778163	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635764	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633558_44635706
ES.30806.47	chr7	-	1238	10	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1109.6560027524	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635788	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631306_44632909_44633012_44635706
ES.30806.48	chr7	-	1238	10	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1113.16845086447	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635788	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631069_44631167_44631318_44632909_44633012_44635706
ES.30806.49	chr7	-	1229	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	1107.56248883152	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635776	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631170_44631318_44632909_44633012_44635706
ES.30806.5	chr7	-	2746	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	47	0	-26	0	multi-exon	FALSE	canonical	3	39	junction_13	17.8819862459058	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2711	False	NA	-2	True	AATAAA	-20	NA	44624228	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30806.50	chr7	-	1773	9	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	3261	junction_8	142.261148508649	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635791	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.51	chr7	-	3316	9	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	3261	junction_8	161.05623047557	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635793	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.52	chr7	-	4350	7	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	222	junction_5	1592.74822764512	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635749	44626181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44627050_44627550_44627702_44628098_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ES.30806.53	chr7	-	4866	4	NIC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	3261	junction_3	187.788888560177	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTTCTCGCCCTGGGG	NA	False	NA	-32	True	AATAAA	-15	NA	44635748	44626183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44628395_44628806_44631318_44632909_44633012_44635706
ES.30806.54	chr7	-	3368	8	NIC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	3261	junction_7	170.729527114004	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635756	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.55	chr7	-	5224	5	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	245	junction_4	1485.60515868113	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635756	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44631075_44631161_44631318_44632909_44633558_44635706
ES.30806.56	chr7	-	3806	9	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	98	junction_7	1481.11402329463	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635795	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44633158_44633558_44635706
ES.30806.57	chr7	-	3475	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-12	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	1575.63592241355	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635792	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633499_44633558_44635706
ES.30806.59	chr7	-	1245	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1109.6560027524	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635792	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632915_44633012_44635706
ES.30806.6	chr7	-	2605	19	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	22.3543985784111	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2793	False	NA	-2	True	AATAAA	-20	NA	44624146	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622515_44623150_44623305_44624018
ES.30806.61	chr7	-	1828	11	NNC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-9	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	1595.51778429449	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635758	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633158_44633300_44633499_44633558_44635706
ES.30806.62	chr7	-	1103	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-9	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	1109.6560027524	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635758	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631245_44632950_44633012_44635706
ES.30806.63	chr7	-	1131	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1113.16845086447	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCACTTCTCGCCCTGGG	NA	False	NA	-33	True	AATAAA	-14	NA	44635781	44626184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631270_44631318_44632909_44633012_44635706
ES.30806.64	chr7	-	1794	9	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	222	junction_7	1463.82665789874	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCACTTCTCGCCCTGG	NA	False	NA	-34	True	AATAAA	-13	NA	44635778	44626185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ES.30806.65	chr7	-	1249	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1106.72638169993	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCACTTCTCGCCCTGG	NA	False	NA	-34	True	AATAAA	-13	NA	44635756	44626185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626892_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.66	chr7	-	1202	10	NNC	ENSMUSG00000109324.3	novel	2147	10	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1123.05592794124	1093	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCACTTCTCGCCCTGG	NA	False	NA	-34	True	AATAAA	-13	NA	44635757	44626185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628382_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.67	chr7	-	4319	8	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	98	junction_6	1531.11345372029	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635791	44626187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44627050_44627550_44627702_44628098_44628395_44628806_44631075_44631161_44631318_44632909_44633012_44633158_44633558_44635706
ES.30806.68	chr7	-	1157	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	133	857	-3	-22	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGGGGGTACATCGTG	NA	False	NA	-118	True	GGGGCT	-19	NA	44635783	44626269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.69	chr7	-	1027	4	ISM	ENSMUSG00000109324.3	ENSMUST00000208312.2	659	6	-6	2804	-6	-1414	5prime_fragment	FALSE	canonical	3	3261	junction_3	184.878939369043	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTTGTTTTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	44635755	44630354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44631075_44631161_44631318_44632909_44633012_44635706
ES.30806.7	chr7	-	1535	8	NNC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	860	0	intron_retention	FALSE	canonical	3	12	junction_4	27.8347895663697	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	NA	False	NA	-2	True	AATAAA	-20	NA	44614751	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44609100_44609267_44609588_44610181_44610335_44610942_44611070_44611569_44611735_44612166_44612284_44613327_44613434_44614507
ES.30806.9	chr7	-	2836	18	NIC	ENSMUSG00000007783.11	novel	2793	19	NA	NA	-12	0	intron_retention	FALSE	canonical	3	39	junction_12	18.2593768867028	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACTGTGCTTTTCTGCG	2725	False	NA	-2	True	AATAAA	-20	NA	44624214	44608796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ES.30807.1	chr7	+	5239	2	NNC	ENSMUSG00000087138.2	novel	704	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGCTACAGACTGATTT	NA	False	NA	11	True	NA	NA	NA	44636321	44641752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44638339_44638530
ES.30807.2	chr7	+	2149	1	NIC	ENSMUSG00000087138.2	novel	899	3	NA	NA	0	-2029	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44636350	44638499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44636400_44638500
ES.30808.1	chr7	-	5046	2	ISM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	23	0	-5	0	intron_retention	FALSE	canonical	3	129	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44646980	44640645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44640879_44642167
ES.30808.10	chr7	-	766	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-2	-23	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	60.7730203297483	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTGTTCTTTAACT	NA	False	NA	NA	False	AAAAAG	-24	NA	44647005	44640668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44640879_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.11	chr7	-	650	5	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	2	-26	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	66.4115953730973	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAACTTTGTTCTTTA	NA	False	NA	NA	False	AAAAAG	-21	NA	44646984	44640671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44640879_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.2	chr7	-	1033	7	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	71.3271025316153	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	44646996	44640646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44640879_44642167_44642456_44643234_44643293_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.3	chr7	-	1137	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	64.7623347324662	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	44646985	44640646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44640879_44643234_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.4	chr7	-	1142	8	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.0081332089167	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	44647013	44640646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44640879_44642167_44642456_44643234_44643293_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.5	chr7	-	1098	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	-24	1	-24	-1	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAAAGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	44647027	44640646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.6	chr7	-	1488	7	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.7578028677168	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGAAAGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	44646675	44640648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44640879_44642167_44642456_44643234_44643509_44643603_44643696_44643786_44643874_44645967_44646111_44646301
ES.30808.7	chr7	-	2221	6	NIC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	129	junction_1	14.1619207736804	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGAGCCCGAAAGTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	44647008	44640652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44640879_44642167_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.8	chr7	-	941	6	NNC	ENSMUSG00000003190.13	novel	1596	8	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.0780773744032	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGAGCCCGAAAGTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	44647017	44640652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44640879_44642167_44642407_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30808.9	chr7	-	965	6	NIC	ENSMUSG00000003190.13	novel	1075	7	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	59.7943141109587	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGAGCCCGAAAGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	44646993	44640653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44640879_44642167_44642456_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ES.30809.1	chr7	+	1608	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	-34	457	-34	1	multi-exon	TRUE	canonical	3	81	junction_5	29.0601066054199	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTCGACTGCGTCT	NA	False	NA	6	True	AATAAA	-21	NA	44647037	44651815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ES.30809.10	chr7	+	1649	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	-20	12	3	0	multi-exon	FALSE	canonical	3	134	junction_1	17.7458915433028	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647092	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
ES.30809.11	chr7	+	3093	5	NIC	ENSMUSG00000003184.16	novel	1797	7	NA	NA	3	-2	intron_retention	FALSE	canonical	3	139	junction_2	18.0069431053691	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTGCTGTCGACTGC	NA	False	NA	2	True	AATAAA	-17	NA	44647092	44651811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44648302_44649315_44649488_44649577_44649649_44649795_44651213_44651587
ES.30809.12	chr7	+	1735	6	NIC	ENSMUSG00000003184.16	novel	1641	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	134	junction_1	18.7467330487208	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTGCTGTCGACTGC	NA	False	NA	2	True	AATAAA	-17	NA	44647094	44651811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44647333_44648128_44648302_44649315_44649649_44649795_44650447_44651096_44651213_44651587
ES.30809.13	chr7	+	1623	9	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.821895733361	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGACTGCGTCTAGGCTG	NA	False	NA	12	True	AATAAA	-27	NA	44647095	44651821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647333_44647423_44647491_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ES.30809.14	chr7	+	1339	8	NIC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	54.0181375435461	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647098	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650241_44651096_44651213_44651587
ES.30809.15	chr7	+	2245	6	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	1	0	intron_retention	FALSE	canonical	2	10	junction_1	60.7005766035217	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647113	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44650447_44651096_44651213_44651587
ES.30809.16	chr7	+	1224	7	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	455	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.0363870534876	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44648204	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44648291_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ES.30809.2	chr7	+	1816	6	NIC	ENSMUSG00000003184.16	novel	1641	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	134	junction_1	18.7467330487208	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTGCTGTCGACTGC	NA	False	NA	2	True	AATAAA	-17	NA	44647070	44651811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44650447_44651096_44651213_44651587
ES.30809.3	chr7	+	3025	4	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	2	0	intron_retention	FALSE	canonical	2	10	junction_1	77.4654044647602	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647073	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647803_44648128_44648302_44649315_44651213_44651587
ES.30809.4	chr7	+	2039	8	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.1268351717915	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647074	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ES.30809.5	chr7	+	2136	7	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	4	0	intron_retention	FALSE	canonical	2	10	junction_1	55.5980115551706	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647075	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
ES.30809.6	chr7	+	1550	8	NNC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.2473548682706	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCCATCACATCTGCTGT	NA	False	NA	-5	True	AATAAA	-10	NA	44647078	44651804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647333_44648128_44648302_44649321_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ES.30809.7	chr7	+	2313	6	NIC	ENSMUSG00000003184.16	novel	1641	7	NA	NA	9	1	intron_retention	FALSE	canonical	3	134	junction_1	18.4499322491981	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTGTCGACTGCGTCT	NA	False	NA	6	True	AATAAA	-21	NA	44647080	44651815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44651213_44651587
ES.30809.8	chr7	+	2928	5	NNC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	9	0	intron_retention	FALSE	canonical	2	10	junction_1	67.6253465795185	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647080	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44651213_44651587
ES.30809.9	chr7	+	1963	6	NIC	ENSMUSG00000003184.16	novel	1712	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_1	58.7789077816184	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCTGTCGACTGCGT	NA	False	NA	4	True	AATAAA	-19	NA	44647083	44651813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44647491_44648128_44648302_44649315_44649488_44649577_44650447_44651096_44651213_44651587
ES.3081.1	chr10	-	443	1	Intergenic	novelGene_2404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAGAAGTTGCATATT	332	False	NA	NA	False	NA	NA	NA	71159517	71159074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_71159100_71159500
ES.3081.2	chr10	-	176	1	Intergenic	novelGene_2405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	334	False	NA	NA	False	NA	NA	NA	71159515	71159339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_71159300_71159500
ES.30810.1	chr7	+	4852	3	Antisense	novelGene_ENSMUSG00000038406.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACCAACAAAACCACACC	NA	False	NA	NA	False	NA	NA	NA	44655001	44660452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_44655050_44655266_44655348_44655729
ES.30811.1	chr7	+	1137	7	NNC	ENSMUSG00000038387.10	novel	995	6	NA	NA	-1785	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.859297261722	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGATGCTTTTTATTT	NA	False	NA	7	True	AATAAA	-15	NA	44665599	44671069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44665767_44667407_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ES.30811.2	chr7	+	2103	7	NNC	ENSMUSG00000038387.10	novel	995	6	NA	NA	-1749	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.859297261722	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGATGCTTTTTATT	NA	False	NA	6	True	AATAAA	-14	NA	44665635	44671068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44666770_44667407_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ES.30811.3	chr7	+	1928	8	NNC	ENSMUSG00000038387.10	novel	995	6	NA	NA	-1654	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.066875676591	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGCTTTTTATTTGAG	NA	False	NA	10	True	AATAAA	-18	NA	44665730	44671072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44665774_44666296_44666462_44666660_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ES.30812.1	chr7	-	3219	4	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	5116	99	intron_retention	FALSE	canonical	3	212	junction_3	17.5562587763516	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGAAATGCTTTTTTTCA	7394	False	NA	93	True	NA	NA	NA	44657869	44652272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44653050_44654828_44655048_44655264_44655348_44655729
ES.30812.10	chr7	-	5230	11	FSM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	-1021	0	432	0	multi-exon	FALSE	canonical	0	0	junction_10	69.4230509269075	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5992	False	NA	-6	True	ATTAAA	-17	NA	44664849	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628
ES.30812.11	chr7	-	4225	12	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	85.2363752714854	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5318	False	NA	-6	True	ATTAAA	-17	NA	44665523	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44664888_44665085_44665503
ES.30812.12	chr7	-	3997	12	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	95.5512929623501	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5304	False	NA	-6	True	ATTAAA	-17	NA	44665537	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658220_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
ES.30812.13	chr7	-	4100	13	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	91.8430121941179	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5300	False	NA	-6	True	ATTAAA	-17	NA	44665541	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658280_44658357_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
ES.30812.14	chr7	-	3641	7	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	97.8287903544873	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5305	False	NA	-6	True	ATTAAA	-17	NA	44665536	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658400_44662934_44663018_44665503
ES.30812.15	chr7	-	4778	12	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	98.6276912819281	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5336	False	NA	-6	True	ATTAAA	-17	NA	44665505	44652371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662241_44662640_44662699_44662903_44663018_44663628_44663760_44664888
ES.30812.16	chr7	-	4242	13	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.0278811590886	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5306	False	NA	-7	True	ATTAAA	-16	NA	44665535	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44653623_44653695_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
ES.30812.17	chr7	-	4364	10	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	372	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	73.1068894424501	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	7385	False	NA	-7	True	ATTAAA	-16	NA	44663456	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662986
ES.30812.18	chr7	-	4468	11	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	69.1483188515816	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5025	False	NA	-7	True	ATTAAA	-16	NA	44665816	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663165_44665503
ES.30812.19	chr7	-	4044	11	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.2076767786553	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5295	False	NA	-7	True	ATTAAA	-16	NA	44665546	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661755_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.2	chr7	-	4399	12	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	-1302	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	72.7262499928088	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAAGTAAATGGATCT	3752	False	NA	12	True	ATTAAA	-35	NA	44667089	44652353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503_44665831_44667044
ES.30812.20	chr7	-	4842	9	NIC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	21	-1	intron_retention	FALSE	canonical	3	86	junction_8	51.9673876099232	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5307	False	NA	-7	True	ATTAAA	-16	NA	44665534	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44658397_44661546_44661663_44661748_44661850_44662121_44662699_44662903_44663018_44665503
ES.30812.21	chr7	-	4523	2	ISM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	6808	1	5965	-1	intron_retention	FALSE	canonical	3	263	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	8243	False	NA	-7	True	ATTAAA	-16	NA	44657020	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44652796_44652920
ES.30812.22	chr7	-	3957	11	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.1168130816886	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	7826	False	NA	-7	True	ATTAAA	-16	NA	44663015	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658249_44658293_44658397_44661550_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903
ES.30812.23	chr7	-	4138	11	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	73.8485612588356	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5305	False	NA	-7	True	ATTAAA	-16	NA	44665536	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655167_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.24	chr7	-	1380	10	NIC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	78.928159239828	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5299	False	NA	-7	True	ATTAAA	-16	NA	44665542	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.26	chr7	-	4483	12	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	196	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	85.2363752714854	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5756	False	NA	-7	True	ATTAAA	-16	NA	44665085	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663165_44663628_44663760_44664888
ES.30812.28	chr7	-	3926	10	NIC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	80.2717606357027	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5319	False	NA	-7	True	ATTAAA	-16	NA	44665522	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.29	chr7	-	1087	4	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	1331	-1	intron_retention	FALSE	canonical	3	3	junction_3	113.962956944595	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	9187	False	NA	-7	True	ATTAAA	-16	NA	44661654	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44653050_44654828_44655048_44655264_44655348_44661546
ES.30812.3	chr7	-	4078	11	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_8	75.5634832442232	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTGGTGTACCCTTG	5312	False	NA	-2	True	ATTAAA	-21	NA	44665529	44652367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662259_44662640_44662699_44662903_44663018_44665503
ES.30812.30	chr7	-	3603	6	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	97.9318130129326	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGCGTAGTGGTGTAC	5332	False	NA	-7	True	ATTAAA	-16	NA	44665509	44652372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658015_44665045
ES.30812.31	chr7	-	4592	11	NNC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	244	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.5922941816231	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAGGCGTAGTGGTGTA	6725	False	NA	-8	True	ATTAAA	-15	NA	44664116	44652373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655167_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628
ES.30812.32	chr7	-	3520	6	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	49	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	97.9318130129326	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGGCGTAGTGGTGT	5335	False	NA	-9	True	ATTAAA	-14	NA	44665506	44652374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658302_44665410
ES.30812.33	chr7	-	3933	12	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	72.7262499928088	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGGCGTAGTGGTGT	5300	False	NA	-9	True	ATTAAA	-14	NA	44665541	44652374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44657395_44657505_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.34	chr7	-	4310	10	NIC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	66	-3	intron_retention	FALSE	canonical	3	86	junction_9	49.3918571786439	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGGCGTAGTGGTGT	5120	False	NA	-9	True	ATTAAA	-14	NA	44665721	44652374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ES.30812.35	chr7	-	4079	11	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.2737831761346	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGGCGTAGTGGTGT	5286	False	NA	-9	True	ATTAAA	-14	NA	44665555	44652374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662241_44662640_44662699_44662903_44663018_44665503
ES.30812.36	chr7	-	3713	8	NNC	ENSMUSG00000038406.18	novel	4293	11	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.9989907995172	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGACAGGCGTAGTGGTG	5319	False	NA	-10	True	ATTAAA	-13	NA	44665522	44652375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658401_44662640_44662699_44662903_44663018_44665503
ES.30812.37	chr7	-	3593	4	FSM	ENSMUSG00000038406.18	ENSMUST00000209989.2	625	4	-1068	-1900	-225	2	multi-exon	FALSE	canonical	3	183	junction_3	3.39934634239519	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTTGCTTGTTTGTT	6788	False	NA	NA	False	NA	NA	NA	44664053	44659681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44661663_44661748_44661850_44662121_44662220_44662640
ES.30812.38	chr7	-	1703	4	NIC	ENSMUSG00000038406.18	novel	1409	8	NA	NA	-33	-920	intron_retention	FALSE	canonical	3	183	junction_2	6.94422221866655	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAATGTGGGCAACACCA	7823	False	NA	NA	False	NA	NA	NA	44663018	44660603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44661663_44661748_44662220_44662640_44662699_44662903
ES.30812.4	chr7	-	4196	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	81.4000426421802	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTAGTGGTGTACCCTTG	5286	False	NA	-2	True	ATTAAA	-21	NA	44665555	44652367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44665503
ES.30812.5	chr7	-	4043	10	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	68	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	94.6452766653557	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTAGTGGTGTACCCTT	7081	False	NA	-3	True	ATTAAA	-20	NA	44663760	44652368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44662121_44662220_44662640_44662699_44662903_44663018_44663628
ES.30812.6	chr7	-	5838	10	ISM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	944	-3	438	3	3prime_fragment	FALSE	canonical	3	182	junction_5	29.3371209675842	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTAGTGGTGTACCCTT	5998	False	NA	-3	True	ATTAAA	-20	NA	44664843	44652368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903
ES.30812.7	chr7	-	5811	9	ISM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	-783	-3	-251	3	intron_retention	FALSE	canonical	3	182	junction_5	30.7896086366813	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGTAGTGGTGTACCCTT	6230	False	NA	-3	True	ATTAAA	-20	NA	44664611	44652368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640
ES.30812.8	chr7	-	4766	12	NIC	ENSMUSG00000038406.18	novel	4209	11	NA	NA	43	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	85.2363752714854	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTAGTGGTGTACCCT	5329	False	NA	-4	True	ATTAAA	-19	NA	44665512	44652369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628_44663760_44664888
ES.30813.1	chr7	-	2642	8	NNC	ENSMUSG00000046574.9	novel	7023	14	NA	NA	-512	515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.046865562811	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGGTTAATTCATGGA	NA	False	NA	NA	False	AATACA	-17	NA	44684330	44676471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680476_44680551_44683168_44683657_44684032_44684167_44684302
ES.30813.2	chr7	-	6110	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	3811	-506	3811	506	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTGCTTTGAGGTTA	NA	False	NA	NA	False	AATACA	-8	NA	44698494	44676480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.3	chr7	-	3463	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	5952	0	5952	0	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAGTCTTGTTATGGTT	NA	False	NA	-14	True	NA	NA	NA	44696353	44676986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.4	chr7	-	5715	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	3562	138	3562	-138	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGAGTGCTCTGTCTGC	NA	False	NA	1	True	NA	NA	NA	44698743	44677124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.5	chr7	-	5612	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	3465	338	3465	-338	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGCCCTGCTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	44698840	44677324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.6	chr7	-	4234	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	4736	445	4736	247	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGTACATACCTGGG	NA	False	NA	NA	False	NA	NA	NA	44697569	44677431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.7	chr7	-	5352	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	3374	689	3374	3	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCCCCTGGCCCAGC	NA	False	NA	0	True	TATAAA	-20	NA	44698931	44677675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30813.8	chr7	-	3642	6	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	4473	5953	4473	-5261	internal_fragment	FALSE	canonical	3	21	junction_4	5.0438080851674	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGACAGGGTGATGTC	NA	False	NA	NA	False	NA	NA	NA	44697832	44682939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
ES.30814.1	chr7	-	1040	4	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	-455	22342	-455	-21650	5prime_fragment	FALSE	canonical	3	13	junction_3	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTACAGTGCCCTCGTC	NA	False	NA	NA	False	NA	NA	NA	44702760	44699328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44699553_44699628_44699791_44700641_44700755_44702219
ES.30815.1	chr7	+	2433	8	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-4	1	intron_retention	FALSE	canonical	3	417	junction_1	68.1190434579982	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGGCGCCTCATTGT	3054	False	NA	28	True	AATAAA	-19	NA	44711848	44726841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.10	chr7	+	3228	7	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	2	-13	intron_retention	FALSE	canonical	3	417	junction_1	73.3954282560494	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAATCTGGCCAAATTCT	3120	False	NA	12	True	NA	NA	NA	44711914	44727621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44725653_44725733_44725853_44725975_44726354_44726735
ES.30815.11	chr7	+	909	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	62	1	2	-1	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3120	False	NA	26	True	AATAAA	-17	NA	44711914	44726839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ES.30815.12	chr7	+	1987	9	NNC	ENSMUSG00000003421.14	novel	972	9	NA	NA	-3	289	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	212.301929748648	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATAGTGGTGTGCGCCT	3122	False	NA	NA	False	TTTAAA	-16	NA	44711916	44727923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44722917_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ES.30815.13	chr7	+	782	8	NIC	ENSMUSG00000003421.14	novel	972	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	187.200972437732	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGATGCCTGGCGC	3122	False	NA	20	True	AATAAA	-11	NA	44711916	44726833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44726050_44726164_44726244_44726354_44726735
ES.30815.14	chr7	+	2562	6	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-3	1	intron_retention	FALSE	canonical	3	417	junction_1	74.6233207516256	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGATGCCTGGCGCC	3122	False	NA	21	True	AATAAA	-12	NA	44711916	44726834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44726164_44726244_44726354_44726735
ES.30815.15	chr7	+	832	1	NIC	ENSMUSG00000003421.14	novel	972	9	NA	NA	-2	-11143	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATTTATTT	3123	False	NA	NA	False	NA	NA	NA	44711917	44712749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711900_44712700
ES.30815.17	chr7	+	862	8	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	187.200972437732	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3123	False	NA	26	True	AATAAA	-17	NA	44711917	44726839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725975_44726164_44726244_44726354_44726735
ES.30815.18	chr7	+	1433	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	38	343	-2	-343	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGGCAAATGCACACAC	3123	False	NA	11	True	AGTAAA	-21	NA	44711917	44727291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.19	chr7	+	2876	7	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	42	junction_1	177.942328360124	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3123	False	NA	26	True	AATAAA	-17	NA	44711917	44726839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44722917_44722989_44723405_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.2	chr7	+	1023	9	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	206.05217785794	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCCTGGCGCCTCATT	3071	False	NA	26	True	AATAAA	-17	NA	44711865	44726839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44722917_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.20	chr7	+	3744	8	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-2	-330	intron_retention	FALSE	canonical	0	0	junction_1	186.822080589845	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACACTAAGCAAGTGTTG	3123	False	NA	24	True	AGTAAA	-34	NA	44711917	44727304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44721996_44722989_44723405_44723512_44724029_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.22	chr7	+	2812	6	NNC	ENSMUSG00000003421.14	novel	679	7	NA	NA	4971	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	219.094865298117	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATCTGGATGCCTGGC	8126	False	NA	18	True	AATAAA	-9	NA	44716920	44726831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44717213_44722913_44722989_44723405_44723512_44724029_44726164_44726244_44726354_44726735
ES.30815.23	chr7	+	185	1	Antisense	novelGene_ENSMUSG00000003420.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	44744345	44744530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_44744300_44744500
ES.30815.3	chr7	+	1035	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	-13	792	-13	2	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCGCCTCATTGTA	3072	False	NA	29	True	AATAAA	-20	NA	44711866	44726842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.4	chr7	+	1112	8	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-9	2	intron_retention	FALSE	canonical	3	417	junction_1	68.1603751067574	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCGCCTCATTGTA	3076	False	NA	29	True	AATAAA	-20	NA	44711870	44726842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.5	chr7	+	3167	8	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-2	-11	intron_retention	FALSE	canonical	1	3	junction_4	184.228673342758	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGGCCAAATTCTTT	3100	False	NA	14	True	NA	NA	NA	44711894	44727623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44725653_44725735_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.6	chr7	+	1791	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	20	3	3	-3	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAATTCTTTGTTGTTTT	3105	False	NA	22	True	NA	NA	NA	44711899	44727631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30815.7	chr7	+	1851	10	NNC	ENSMUSG00000003421.14	novel	972	9	NA	NA	-5	21453	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	208.835927092166	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCCAAACTACAGAAACAA	3113	False	NA	NA	False	NA	NA	NA	44711907	44749087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735_44727591_44748903
ES.30815.8	chr7	+	3357	6	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	417	junction_1	74.6233207516256	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGCCAAATTCTTTG	3117	False	NA	15	True	NA	NA	NA	44711911	44727624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44726164_44726244_44726354_44726735
ES.30815.9	chr7	+	2285	8	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	2	-12	intron_retention	FALSE	canonical	3	417	junction_1	61.078069814336	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGGCCAAATTCTT	3120	False	NA	13	True	NA	NA	NA	44711914	44727622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44711956_44722913_44722989_44723405_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ES.30816.1	chr7	-	1219	6	FSM	ENSMUSG00000007837.12	ENSMUST00000209920.2	876	6	-18	-325	-17	6	multi-exon	FALSE	canonical	3	12	junction_4	10.7962956610126	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGGCGCATTTGCGCG	NA	False	NA	-18	True	AATAAA	-23	NA	44711147	44703001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44710164_44710317_44711011
ES.30816.2	chr7	-	5683	4	NIC	ENSMUSG00000007837.12	novel	922	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	33	junction_1	4.24264068711928	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGCAAAA	NA	False	NA	-51	True	AATAAA	-17	NA	44711828	44703034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44703622_44703942_44704072_44706166_44710317_44711011
ES.30816.3	chr7	-	1080	5	NIC	ENSMUSG00000007837.12	novel	876	6	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.015617378047	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGCAAAA	NA	False	NA	-51	True	AATAAA	-17	NA	44711081	44703034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44703622_44703942_44704072_44706166_44706309_44710164_44710317_44711011
ES.30816.4	chr7	-	1369	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	-72	-2	-18	2	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATGCAAAA	NA	False	NA	-51	True	AATAAA	-17	NA	44711148	44703034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
ES.30816.5	chr7	-	1352	8	NIC	ENSMUSG00000007837.12	novel	1623	8	NA	NA	-26	-24	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	14.3612289849854	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAATAAAAAATTGAAAC	NA	False	NA	-77	True	NA	NA	NA	44711854	44703060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709840_44710164_44710317_44711011_44711076_44711801
ES.30817.1	chr7	-	1469	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	-3	-4	-3	4	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATC	6657	False	NA	0	True	AATAAA	-29	NA	44741648	44732332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ES.30817.2	chr7	-	1456	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	-5	2	-5	-2	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTCTGTCTGTCTG	6655	False	NA	-6	True	AATAAA	-23	NA	44741650	44732338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
ES.30817.3	chr7	-	2580	6	NIC	ENSMUSG00000019539.12	novel	1462	7	NA	NA	10	-3	intron_retention	FALSE	canonical	3	94	junction_5	35.0051424793558	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGTCTGTCTGTCT	6677	False	NA	-7	True	AATAAA	-22	NA	44741628	44732339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44732788_44732989_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ES.30817.4	chr7	-	1329	7	NNC	ENSMUSG00000019539.12	novel	1462	7	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	67.7800773744681	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTGTCTGTCTGTCTG	6693	False	NA	-10	True	AATAAA	-19	NA	44741612	44732342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44738015_44738125_44740864_44741113_44741519
ES.30817.5	chr7	-	2760	5	NIC	ENSMUSG00000019539.12	novel	1453	7	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	54	junction_4	50.4727649331796	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTCTGTCTGTCTGTC	6685	False	NA	-12	True	AATAAA	-17	NA	44741620	44732344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
ES.30817.6	chr7	-	1355	7	NIC	ENSMUSG00000019539.12	novel	1453	7	NA	NA	-3	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	63.9463751035889	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTGCTCTGTCTGTCTG	6693	False	NA	-14	True	AATAAA	-15	NA	44741612	44732346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741583
ES.30818.1	chr7	-	1444	6	NIC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	33.7579620237952	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATAGACACCTCTTGAT	816	False	NA	62	True	AATAAA	-21	NA	44753224	44742418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44742780_44743205_44743323_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ES.30818.10	chr7	-	2894	6	NIC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	5	-2	intron_retention	FALSE	canonical	3	66	junction_2	11.2071405808975	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATCTGTGTGTGCATCG	826	False	NA	-9	True	CATAAA	-8	NA	44753214	44742489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44742780_44743205_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ES.30818.2	chr7	-	865	4	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2627	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.1531598920993	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCATATAGACACCTC	NA	False	NA	57	True	AATAAA	-16	NA	44755902	44742423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44755780
ES.30818.3	chr7	-	1717	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-3418	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	29.5137463648686	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCATCGTTATTCTCA	NA	False	NA	0	True	CATAAA	-17	NA	44756693	44742480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44756592
ES.30818.4	chr7	-	3712	4	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	3910	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGCATCGTTATT	5440	False	NA	-4	True	CATAAA	-13	NA	44748600	44742484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44743051_44743106_44744365_44746592_44747379_44747498
ES.30818.5	chr7	-	1647	7	FSM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	-45	0	5	0	multi-exon	FALSE	canonical	3	14	junction_4	28.0475786239502	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	826	False	NA	-7	True	CATAAA	-10	NA	44753214	44742487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063
ES.30818.6	chr7	-	1720	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2812	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	30.1662062579967	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	NA	False	NA	-7	True	CATAAA	-10	NA	44756087	44742487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44755976
ES.30818.8	chr7	-	1784	8	NNC	ENSMUSG00000003420.9	novel	1770	7	NA	NA	-2680	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	25.6515106767613	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	NA	False	NA	-7	True	CATAAA	-10	NA	44755955	44742487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063_44753189_44755780
ES.30818.9	chr7	-	3114	5	NIC	ENSMUSG00000003420.9	novel	1602	7	NA	NA	15	0	intron_retention	FALSE	canonical	3	66	junction_2	11.7046999107196	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	836	False	NA	-7	True	CATAAA	-10	NA	44753204	44742487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44742780_44743205_44744854_44751333_44752096_44752426_44752698_44753063
ES.30819.1	chr7	-	4328	4	NIC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-18	3467	combination_of_known_junctions	FALSE	canonical	3	18027	junction_2	5813.10830986506	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44773793	44768335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.10	chr7	-	533	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_2	12288.3419625066	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773758	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772252_44772383_44772601_44772663_44772842_44772975_44773720
ES.30819.11	chr7	-	595	5	FSM	ENSMUSG00000003429.12	ENSMUST00000211725.2	493	5	-56	-46	-40	6	multi-exon	FALSE	canonical	3	381	junction_1	12273.9079045755	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773815	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44771973_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.13	chr7	-	577	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-19	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12424.5540035649	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773794	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772259_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.14	chr7	-	1995	1	FSM	ENSMUSG00000064767.3	ENSMUST00000082833.3	87	1	-1270	-638	-1270	638	mono-exon	FALSE	NA	NA	NA	NA	NA	2121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773805	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44771800_44773800
ES.30819.15	chr7	-	505	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13022.6814515099	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773758	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772885_44772975_44773720
ES.30819.16	chr7	-	1825	2	ISM	ENSMUSG00000003429.12	ENSMUST00000211583.2	514	3	-40	-525	-40	6	intron_retention	FALSE	canonical	3	18027	junction_1	0	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773815	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44772663_44772842
ES.30819.17	chr7	-	1057	3	FSM	ENSMUSG00000003429.12	ENSMUST00000211583.2	514	3	-18	-525	-18	6	multi-exon	FALSE	canonical	3	18027	junction_1	6373.5	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773793	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44772663_44772842_44772975_44773720
ES.30819.19	chr7	-	574	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-15	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12148.5848352802	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACAGGCTTGGAGTCT	NA	False	NA	-9	True	AATAAA	-16	NA	44773790	44771810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772969_44773720
ES.30819.2	chr7	-	795	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	-131	-3	-131	3	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTCATGTGTCCTG	NA	False	NA	2	True	AATAAA	-27	NA	44773994	44771799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.20	chr7	-	567	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12424.5540035649	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAACAGGCTTGGAGTC	NA	False	NA	-10	True	AATAAA	-15	NA	44773795	44771811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772269_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.4	chr7	-	572	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_1	12407.1379329602	2121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTTGGAGTCTCA	NA	False	NA	-7	True	AATAAA	-18	NA	44773807	44771808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44771983_44772279_44772383_44772586_44772663_44772842_44772975_44773720
ES.30819.7	chr7	-	1537	3	NIC	ENSMUSG00000003429.12	novel	449	4	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	18027	junction_2	5735	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTTGGAGTCTCA	NA	False	NA	-7	True	AATAAA	-18	NA	44773795	44771808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44771983_44772252_44772663_44772842
ES.30819.8	chr7	-	857	4	NIC	ENSMUSG00000003429.12	novel	661	5	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	18027	junction_2	5813.10830986506	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTTGGAGTCTCA	NA	False	NA	-7	True	AATAAA	-18	NA	44773795	44771808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44772383_44772586_44772663_44772842_44772975_44773720
ES.3082.1	chr10	+	180	1	Intergenic	novelGene_2406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	71171789	71171969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71171800_71172000
ES.30820.10	chr7	-	1005	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5931.55847986008	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTACGATGTGTGC	NA	False	NA	-9	True	AATAAA	-11	NA	44778158	44774989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776979_44778116
ES.30820.12	chr7	-	990	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6001.12606099889	1652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTGTACGATGTGTG	NA	False	NA	-10	True	AATAAA	-10	NA	44778160	44774990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775924_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.17	chr7	-	811	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	22	214	-2	100	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTGAGCTTCAGTGT	NA	False	NA	-10	True	ATTAAA	-18	NA	44778163	44775195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.18	chr7	-	956	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	9	-231	-3	100	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTTGAGCTTCAGTGT	NA	False	NA	-10	True	ATTAAA	-18	NA	44778150	44775195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.19	chr7	-	703	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	-16	360	-16	4	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCCTGCCCTTCCTC	NA	False	NA	-1	True	AATAAA	-19	NA	44778201	44775341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.2	chr7	-	1013	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5931.55847986008	1652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	False	NA	-1	True	AATAAA	-19	NA	44778157	44774981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778129
ES.30820.20	chr7	-	574	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209212.2	514	7	-34	-26	0	2	multi-exon	FALSE	canonical	3	332	junction_3	5972.4797311409	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGCCTGCCCTTCC	NA	False	NA	-3	True	AATAAA	-17	NA	44778160	44775343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.21	chr7	-	813	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	3	-82	3	1	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGGCCTGCCCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	44778156	44775344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.25	chr7	-	673	8	FSM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	-16	1	0	0	multi-exon	FALSE	canonical	3	190	junction_2	5939.18297480076	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.27	chr7	-	2729	2	ISM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	-13	1	2	0	intron_retention	FALSE	canonical	3	17594	junction_1	0	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778157	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44775457_44775538
ES.30820.28	chr7	-	1827	6	FSM	ENSMUSG00000074129.15	ENSMUST00000210073.2	992	6	-836	1	-33	0	multi-exon	FALSE	canonical	3	15796	junction_2	955.88798506938	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778083	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776699_44776919
ES.30820.3	chr7	-	1118	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	-72	1	-72	-1	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGATGTGTGCTGTGCAG	NA	False	NA	-2	True	AATAAA	-18	NA	44778257	44774982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.32	chr7	-	907	6	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	11064	junction_5	2417.94080986281	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778157	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775662_44775901_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.35	chr7	-	831	8	NIC	ENSMUSG00000074129.15	novel	734	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	7403.95883350004	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.36	chr7	-	2459	3	NIC	ENSMUSG00000074129.15	novel	992	6	NA	NA	-33	0	intron_retention	FALSE	canonical	3	17594	junction_1	401	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778083	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44776219_44776414
ES.30820.38	chr7	-	729	7	NIC	ENSMUSG00000074129.15	novel	734	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	332	junction_3	7433.61662576763	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.4	chr7	-	902	4	FSM	ENSMUSG00000105913.3_ENSMUSG00000074129.15	ENSMUST00000209967.2	470	4	-32	-400	-32	-7	multi-exon	FALSE	canonical	3	190	junction_2	7940.61084971847	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	44776367	44774988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132
ES.30820.40	chr7	-	773	7	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11064	junction_6	2341.53010277942	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776699_44776919_44776993_44778123
ES.30820.42	chr7	-	728	8	NNC	ENSMUSG00000074129.15	novel	734	8	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_6	7391.38815218945	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778083	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776929_44776993_44777965
ES.30820.43	chr7	-	2814	1	FSM	ENSMUSG00000065818.3	ENSMUST00000083884.3	90	1	-2301	-423	-2301	423	mono-exon	FALSE	NA	NA	NA	NA	NA	1640	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778160	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775300_44778200
ES.30820.45	chr7	-	1772	7	ISM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	15	-80	0	0	intron_retention	FALSE	canonical	3	15796	junction_2	909.956409212368	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778144	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919
ES.30820.47	chr7	-	850	7	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	11064	junction_6	2083.86483886711	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778157	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.48	chr7	-	603	7	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	6106.04517397854	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44778208	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776632_44776699_44776919_44776993_44778123
ES.30820.49	chr7	-	2147	3	ISM	ENSMUSG00000074129.15	ENSMUST00000209711.2	495	6	235	-22	235	0	intron_retention	FALSE	canonical	3	15796	junction_2	899	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44777815	44775346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44775457_44775538_44775662_44775901
ES.30820.5	chr7	-	1170	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	2	-438	2	-7	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	44778157	44774988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.50	chr7	-	637	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5775.57521828266	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778159	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776202_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.51	chr7	-	1979	6	NIC	ENSMUSG00000074129.15	novel	734	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	15796	junction_2	605.061517533548	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778157	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776517_44776632_44776699_44776919
ES.30820.52	chr7	-	716	8	NNC	ENSMUSG00000074129.15	novel	734	8	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7195.4722640033	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778090	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776192_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.53	chr7	-	2269	4	NIC	ENSMUSG00000074129.15	novel	992	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	15796	junction_2	760.509624455134	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778160	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44776699_44776919
ES.30820.54	chr7	-	1815	5	ISM	ENSMUSG00000074129.15	ENSMUST00000209927.2	552	7	274	-3	198	-2	intron_retention	FALSE	canonical	3	15796	junction_2	1010.6850090409	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44777852	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414
ES.30820.55	chr7	-	646	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5965.14237474852	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778160	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776141_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.56	chr7	-	751	8	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	-137	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	5931.55847986008	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44777384	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777251
ES.30820.57	chr7	-	1022	6	NIC	ENSMUSG00000074129.15	novel	562	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	11064	junction_5	2243.91055080188	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778160	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.59	chr7	-	892	7	NIC	ENSMUSG00000074129.15	novel	658	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	11064	junction_6	2342.7579663484	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGGCCTGCC	NA	False	NA	-8	True	AATAAA	-12	NA	44778157	44775348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30820.6	chr7	-	1006	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_6	5942.94462504292	1652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	44778161	44774988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776929_44776993_44778123
ES.30820.63	chr7	-	639	8	NNC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5978.64215353286	1640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCCTGCCTGGCCTGC	NA	False	NA	-9	True	AATAAA	-11	NA	44778160	44775349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776502_44776632_44776699_44776919_44776993_44778123
ES.30820.7	chr7	-	1090	7	NIC	ENSMUSG00000074129.15	novel	734	8	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	3	332	junction_3	7433.61662576763	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	44778163	44774988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ES.30820.8	chr7	-	1327	6	NIC	ENSMUSG00000074129.15	novel	1047	8	NA	NA	0	-7	intron_retention	FALSE	canonical	3	11064	junction_5	2260.78420022788	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	False	NA	-8	True	AATAAA	-12	NA	44778160	44774988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776699_44776919_44776993_44778123
ES.30820.9	chr7	-	928	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209212.2	514	7	-34	-380	0	-8	multi-exon	FALSE	canonical	3	332	junction_3	5972.4797311409	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTACGATGTGTGC	NA	False	NA	-9	True	AATAAA	-11	NA	44778160	44774989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ES.30821.1	chr7	-	1024	6	ISM	ENSMUSG00000110206.2	ENSMUST00000209238.2	1041	9	1543	-193	407	6	3prime_fragment	FALSE	canonical	0	0	junction_1	5.00399840127872	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGCCTGGAATCTCAGT	NA	False	NA	NA	False	AATAAA	-22	NA	44783962	44780605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44780991_44781090_44781165_44781492_44781562_44781651_44781837_44783305_44783451_44783796
ES.30821.2	chr7	-	942	5	ISM	ENSMUSG00000110206.2	ENSMUST00000211429.2	1358	8	1748	1	408	0	3prime_fragment	FALSE	canonical	1	2	junction_1	4.41588043316392	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44783961	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44780991_44781492_44781562_44781651_44781837_44783305_44783451_44783796
ES.30821.3	chr7	-	783	5	NIC	ENSMUSG00000110206.2	novel	1075	9	NA	NA	416	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	4.03112887414927	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44783953	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44780856_44781492_44781562_44781651_44781837_44783321_44783451_44783796
ES.30821.4	chr7	-	3114	2	NNC	ENSMUSG00000110206.2	novel	2482	7	NA	NA	294	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44784075	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44783451_44783799
ES.30821.5	chr7	-	538	3	NIC	ENSMUSG00000110206.2	novel	1075	9	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44783415	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44780856_44781651_44781837_44783305
ES.30821.6	chr7	-	1532	3	ISM	ENSMUSG00000089989.11	ENSMUST00000209467.2	1477	13	1696	5267	1696	-5267	internal_fragment	FALSE	canonical	3	5	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44783959	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44781837_44783305_44783451_44783796
ES.30821.7	chr7	-	3168	7	NIC	ENSMUSG00000110206.2	novel	1075	9	NA	NA	3	0	intron_retention	TRUE	canonical	0	0	junction_1	5.08811250749125	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	False	NA	NA	False	AATAAA	-15	NA	44785853	44780612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44780991_44781090_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441_44785509_44785802
ES.30821.8	chr7	-	805	5	ISM	ENSMUSG00000110206.2	ENSMUST00000146760.7	1075	9	1896	1	409	-1	3prime_fragment	FALSE	canonical	3	5	junction_3	3.53553390593274	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCTGCGTGCCTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	44783960	44780613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44780856_44781492_44781562_44781651_44781837_44783305_44783451_44783796
ES.30822.1	chr7	+	1097	10	NIC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	115.92792567202	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803718	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44803845_44805716_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.10	chr7	+	3576	8	NIC	ENSMUSG00000003423.16	novel	1185	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	370	junction_2	17.2532162041677	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803769	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44805824_44806155_44806223_44807026_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.12	chr7	+	1118	10	NNC	ENSMUSG00000003423.16	novel	1072	10	NA	NA	-122	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	119.017687242457	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTCCAGACAATGATGC	NA	False	NA	18	True	AATAAA	-18	NA	44805244	44809486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44805407_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.13	chr7	+	1105	10	NNC	ENSMUSG00000003423.16	novel	1072	10	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	117.781446483742	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44805248	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44805396_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.14	chr7	+	1179	10	FSM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	-109	2	-109	-1	multi-exon	FALSE	canonical	3	17	junction_1	115.619106456406	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCAGACAATGATGCA	NA	False	NA	19	True	AATAAA	-19	NA	44805257	44809487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44805480_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.15	chr7	+	979	8	NIC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	375	-2	intron_retention	FALSE	canonical	3	336	junction_3	23.5233275447057	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCAGCTCCAGACAAT	NA	False	NA	13	True	AATAAA	-13	NA	44805785	44809481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.2	chr7	+	2969	9	NIC	ENSMUSG00000003423.16	novel	1185	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	336	junction_3	22.7705950734714	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803718	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.3	chr7	+	1083	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	-7	1	-7	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803719	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.4	chr7	+	1095	10	NNC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	156.521524571929	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCAGCTCCAGACAATG	NA	False	NA	14	True	AATAAA	-14	NA	44803732	44809482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809040_44809216_44809365
ES.30822.5	chr7	+	1184	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	1	0	1	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803738	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.8	chr7	+	1069	10	NNC	ENSMUSG00000003423.16	novel	1185	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.872854328754	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803760	44809488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44803877_44805734_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30822.9	chr7	+	3664	7	NIC	ENSMUSG00000003423.16	novel	1185	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	370	junction_2	18.1659021245849	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGCTCCAGACAATGA	NA	False	NA	15	True	AATAAA	-15	NA	44803760	44809483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44805824_44806155_44806223_44807026_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ES.30823.1	chr7	-	5125	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	20	-1608	13	1387	multi-exon	TRUE	canonical	3	349	junction_15	41.3256881370413	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATCTCTCTAGTTCCAT	9353	False	NA	NA	False	NA	NA	NA	44803977	44788720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.10	chr7	-	2527	16	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	139.441106644426	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9325	False	NA	-7	True	AATAAA	-21	NA	44804005	44791257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798023_44798165_44803815
ES.30823.11	chr7	-	2538	15	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	13	1	intron_retention	FALSE	canonical	3	14	junction_11	142.171228324388	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9353	False	NA	-7	True	AATAAA	-21	NA	44803977	44791257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44798165_44803815
ES.30823.12	chr7	-	2664	16	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-18	1	intron_retention	FALSE	non_canonical	0	0	junction_14	109.651245116303	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9362	False	NA	-7	True	AATAAA	-21	NA	44803968	44791257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799086_44799191_44803815
ES.30823.13	chr7	-	2519	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	106.541053560353	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9340	False	NA	-8	True	AATAAA	-20	NA	44803990	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796903_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.16	chr7	-	2252	14	NNC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	337	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	150.370076023501	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	NA	False	NA	-8	True	AATAAA	-20	NA	44798266	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796735_44796822_44797005_44797148_44797227_44797307_44797487_44798037
ES.30823.17	chr7	-	2530	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	103.601079114795	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9323	False	NA	-8	True	AATAAA	-20	NA	44804007	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796918_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.18	chr7	-	4551	14	NIC	ENSMUSG00000007833.16	novel	2685	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	357	junction_9	33.582539842134	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9342	False	NA	-8	True	AATAAA	-20	NA	44803988	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.19	chr7	-	3031	16	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_14	109.651245116303	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9356	False	NA	-8	True	AATAAA	-20	NA	44803974	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44798724_44799191_44803815
ES.30823.2	chr7	-	3513	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	20	4	13	-4	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGTTTTGGTTTTTGTT	9353	False	NA	NA	False	NA	NA	NA	44803977	44790332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.20	chr7	-	3479	14	NNC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_12	116.01953518429	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9370	False	NA	-8	True	AATAAA	-20	NA	44803960	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44798584_44799191_44803815
ES.30823.21	chr7	-	2774	15	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	349	junction_13	41.7145303319638	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9362	False	NA	-8	True	AATAAA	-20	NA	44803968	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.22	chr7	-	2640	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	184	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	105.565423286936	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9655	False	NA	-8	True	AATAAA	-20	NA	44803675	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803460
ES.30823.23	chr7	-	3653	15	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	357	junction_10	40.9162908527014	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9322	False	NA	-8	True	AATAAA	-20	NA	44804008	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.24	chr7	-	3213	16	NNC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	109.877992943689	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9342	False	NA	-8	True	AATAAA	-20	NA	44803988	44791258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44798584_44799191_44803815
ES.30823.27	chr7	-	3695	14	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	364	junction_11	39.5140601146676	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGAGGATGTGGGAAC	9363	False	NA	-9	True	AATAAA	-19	NA	44803967	44791259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.28	chr7	-	2512	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	102.490454840113	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9323	False	NA	-10	True	AATAAA	-18	NA	44804007	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
ES.30823.29	chr7	-	2576	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.71806826283	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9370	False	NA	-10	True	AATAAA	-18	NA	44803960	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795318_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.3	chr7	-	3310	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	29	198	-18	-198	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTCTTGTAGGACTTGT	9362	False	NA	NA	False	TTTAAA	-15	NA	44803968	44790526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.30	chr7	-	4681	12	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	357	junction_8	42.794338082284	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9362	False	NA	-10	True	AATAAA	-18	NA	44803968	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44799191_44803815
ES.30823.31	chr7	-	3552	16	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	357	junction_11	39.9080053233545	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9309	False	NA	-10	True	AATAAA	-18	NA	44804021	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.33	chr7	-	4096	15	NNC	ENSMUSG00000007833.16	novel	2685	16	NA	NA	6	-2	intron_retention	FALSE	canonical	1	5	junction_6	142.331963223663	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9346	False	NA	-10	True	AATAAA	-18	NA	44803984	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795363_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.34	chr7	-	2505	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	139.154365723825	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9370	False	NA	-10	True	AATAAA	-18	NA	44803960	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796735_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.36	chr7	-	3699	14	NNC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	13	-2	intron_retention	FALSE	canonical	1	5	junction_7	116.494711259693	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGAGGATGTGGGAA	9353	False	NA	-10	True	AATAAA	-18	NA	44803977	44791260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795363_44795464_44795617_44795714_44796046_44796233_44796585_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.39	chr7	-	3547	15	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-18	-7	intron_retention	FALSE	canonical	3	14	junction_11	110.349745475604	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGCATTTGAGGATGT	9362	False	NA	-15	True	AATAAA	-13	NA	44803968	44791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.4	chr7	-	3795	14	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-10	16	intron_retention	FALSE	canonical	3	364	junction_11	38.7446503274205	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGGCTTCTTCATGTG	9312	False	NA	8	True	AATAAA	-36	NA	44804018	44791242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.40	chr7	-	4123	13	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	364	junction_10	38.3036116660905	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGCATTTGAGGATGT	9370	False	NA	-15	True	AATAAA	-13	NA	44803960	44791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
ES.30823.42	chr7	-	2590	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	104.562612074058	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGCATTTGAGGATGT	9362	False	NA	-15	True	AATAAA	-13	NA	44803968	44791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794880_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.43	chr7	-	2650	14	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	27	junction_13	110.002205464711	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGCATTTGAGGATGT	9370	False	NA	-15	True	AATAAA	-13	NA	44803960	44791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
ES.30823.44	chr7	-	2543	15	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-10	-8	intron_retention	FALSE	canonical	3	27	junction_14	105.865625262617	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGCATTTGAGGATG	9370	False	NA	-16	True	AATAAA	-12	NA	44803960	44791266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
ES.30823.46	chr7	-	2659	16	FSM	ENSMUSG00000007833.16	ENSMUST00000107815.4	2685	16	26	0	8	0	multi-exon	FALSE	canonical	3	349	junction_14	34.1011567089577	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGGCAGTCTTCTTC	9348	False	NA	NA	False	NA	NA	NA	44803982	44791868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.48	chr7	-	159	1	Intergenic	novelGene_25389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	44802233	44802074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44802100_44802200
ES.30823.49	chr7	-	181	1	Intergenic	novelGene_25390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATATCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	44802646	44802465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44802500_44802600
ES.30823.5	chr7	-	2635	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	-21	923	-10	7	multi-exon	FALSE	canonical	3	349	junction_15	41.3256881370413	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGGGAACAGTGGCTT	9312	False	NA	-1	True	AATAAA	-27	NA	44804018	44791251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.7	chr7	-	2582	17	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	106.541053560353	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9350	False	NA	-7	True	AATAAA	-21	NA	44803980	44791257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796721_44796813_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30823.8	chr7	-	2655	16	NNC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	-16	1	intron_retention	FALSE	canonical	0	0	junction_4	109.631990465071	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGGATGTGGGAACAG	9364	False	NA	-7	True	AATAAA	-21	NA	44803966	44791257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794324_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ES.30824.1	chr7	+	2910	12	FSM	ENSMUSG00000070570.6	ENSMUST00000085374.7	2915	12	1	4	1	-1	multi-exon	TRUE	canonical	0	0	junction_3	1.21287855128421	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGGTGGTCGCGTGGTGT	40	False	NA	15	True	AATAAA	-16	NA	44813373	44825562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44813569_44818138_44818392_44819240_44819360_44819633_44819749_44819824_44819913_44820083_44820171_44820270_44820414_44821198_44821349_44821481_44821615_44822315_44822427_44822785_44822914_44824174
ES.30825.10	chr7	-	6358	2	ISM	ENSMUSG00000038292.15	ENSMUST00000211277.2	480	5	-47	-252	-47	-52	intron_retention	FALSE	canonical	3	49	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGGCTCTCTCCTG	9358	False	NA	-56	True	NA	NA	NA	44839537	44833099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44833533_44833612
ES.30825.11	chr7	-	2236	19	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	378	-53	intron_retention	FALSE	canonical	2	9	junction_10	15.2943344630182	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTCCTGGCTCTCTCCT	9456	False	NA	-57	True	NA	NA	NA	44853938	44833100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
ES.30825.12	chr7	-	2108	6	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	189	-53	intron_retention	FALSE	canonical	3	35	junction_3	7.64198926981712	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTCCTGGCTCTCTCCT	9594	False	NA	-57	True	NA	NA	NA	44839301	44833100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44838825_44839060
ES.30825.13	chr7	-	2958	11	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	382	-3966	intron_retention	FALSE	canonical	2	9	junction_3	12.2396895385463	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTCATGGTGATGG	9460	False	NA	NA	False	NA	NA	NA	44853934	44837317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44846036_44849668_44849810_44853866
ES.30825.14	chr7	-	1343	9	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	394	-8857	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	3.11247489949718	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTGTTGGTGGTGAG	9472	False	NA	NA	False	NA	NA	NA	44853922	44842208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
ES.30825.2	chr7	-	1028	9	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-69	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	18.6195461813654	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGATGATTTCCTCAT	9336	False	NA	-2	True	NA	NA	NA	44839559	44833045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44837565_44837722_44838276_44838342_44838764_44838825_44839060_44839118_44839373
ES.30825.3	chr7	-	1010	9	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-58	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	12.0078099585228	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGGATGATTTCCTCA	9347	False	NA	-3	True	NA	NA	NA	44839548	44833046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838764_44838825_44839060_44839118_44839373
ES.30825.5	chr7	-	2031	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	381	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGGATGATTTCCTCA	9459	False	NA	-3	True	NA	NA	NA	44853935	44833046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
ES.30825.6	chr7	-	1088	10	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-46	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	12.720159949301	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCACAGGATGATTTC	9359	False	NA	-7	True	NA	NA	NA	44839536	44833050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373
ES.30825.7	chr7	-	4598	7	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-65	-3	intron_retention	FALSE	canonical	3	35	junction_5	6.53197264742181	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCACAGGATGATTTC	9340	False	NA	-7	True	NA	NA	NA	44839555	44833050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44837722_44838035_44838124_44838276_44838825_44839060
ES.30825.8	chr7	-	1638	9	NIC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	-72	-5	intron_retention	FALSE	canonical	3	35	junction_4	6.87386354243376	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTTCACAGGATGATT	9333	False	NA	-9	True	NA	NA	NA	44839562	44833052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44838342_44838764_44838825_44839060_44839118_44839373
ES.30826.1	chr7	+	170	1	Intergenic	novelGene_25391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGACACTTGCCACC	1753	False	NA	NA	False	NA	NA	NA	44854552	44854722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44854600_44854700
ES.30827.1	chr7	-	742	4	FSM	ENSMUSG00000030792.9	ENSMUST00000210741.2	662	4	-81	1	-70	-1	multi-exon	FALSE	canonical	2	4	junction_3	19.9387952383176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAATCTCCTTTTGGTA	8531	False	NA	-5	True	AATAAA	-16	NA	44861317	44856949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44861179
ES.30827.2	chr7	-	798	5	FSM	ENSMUSG00000030792.9	ENSMUST00000033057.9	1149	5	343	8	32	-2	multi-exon	FALSE	canonical	3	39	junction_1	6.17960354715414	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAATCTCCTTTTGGT	8644	False	NA	-6	True	AATAAA	-15	NA	44861204	44856950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861179
ES.30828.1	chr7	+	2139	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	-7	8	-7	1	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5423	False	NA	NA	False	AATAAA	-30	NA	44865169	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.11	chr7	+	2210	9	NNC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.819180845056	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	5500	False	NA	NA	False	AATAAA	-13	NA	44865246	44883043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44865869_44869942_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.12	chr7	+	3440	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	-27	-17	2	1	multi-exon	FALSE	canonical	3	317	junction_7	23.9883304963059	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5502	False	NA	NA	False	AATAAA	-30	NA	44865248	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.13	chr7	+	2102	12	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	100.831419739145	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5502	False	NA	NA	False	AATAAA	-30	NA	44865248	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44865299_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.14	chr7	+	3400	10	NNC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_5	113.495417865847	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5521	False	NA	NA	False	AATAAA	-30	NA	44865267	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.16	chr7	+	2082	12	NIC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.4747265400093	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5554	False	NA	NA	False	AATAAA	-30	NA	44865300	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44865331_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.17	chr7	+	2154	12	NNC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	67	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	102.231870627025	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5596	False	NA	NA	False	AATAAA	-30	NA	44865342	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44865445_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.18	chr7	+	2031	11	NNC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.279083852792	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	6888	False	NA	NA	False	AATAAA	-13	NA	44866634	44883043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880889_44881606_44881760_44882238
ES.30828.2	chr7	+	2107	12	NNC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	113.104208513526	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAAG	5430	False	NA	NA	False	AATAAA	-11	NA	44865176	44883041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878068_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.20	chr7	+	1972	10	NIC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	113.495417865847	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	6888	False	NA	NA	False	AATAAA	-13	NA	44866634	44883043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.22	chr7	+	1873	9	NIC	ENSMUSG00000030796.18	novel	1948	11	NA	NA	80	1	intron_retention	FALSE	canonical	3	317	junction_5	22.4819371941121	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	7796	False	NA	NA	False	AATAAA	-30	NA	44867542	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44867570_44868567_44868631_44869861_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.23	chr7	+	1338	4	NNC	ENSMUSG00000030796.18	novel	3396	11	NA	NA	-2809	-3	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_3	144.397599241354	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	8714	False	NA	NA	False	AATAAA	-10	NA	44877923	44883040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44878237_44880732_44880895_44881606_44881668_44882238
ES.30828.24	chr7	+	1295	4	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	11427	16	-2671	0	3prime_fragment	FALSE	canonical	3	318	junction_1	32.2524762184584	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	8852	False	NA	NA	False	AATAAA	-13	NA	44878061	44883043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.4	chr7	+	1919	11	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	118.792087278573	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5469	False	NA	NA	False	AATAAA	-30	NA	44865215	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44880732_44880895_44881606_44881760_44882238
ES.30828.6	chr7	+	4061	3	NIC	ENSMUSG00000030796.18	novel	811	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	353	junction_1	15	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAATAATTA	5489	False	NA	NA	False	NA	NA	NA	44865235	44870624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44868631_44869861_44869970_44870066
ES.30828.7	chr7	+	1860	11	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	138.315906532835	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5489	False	NA	NA	False	AATAAA	-30	NA	44865235	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44865257_44866636_44866770_44867504_44867570_44868567_44868631_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.8	chr7	+	1944	12	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	108.46471795622	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	5496	False	NA	NA	False	AATAAA	-13	NA	44865242	44883043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44865257_44866636_44866770_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ES.30828.9	chr7	+	1974	12	NNC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_11	105.118508486595	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACCCAAAGGGGAT	5496	False	NA	NA	False	AATAAA	-30	NA	44865242	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881668_44882238
ES.30829.1	chr7	-	3577	1	Genic_Genomic	ENSMUSG00000030798.16	novel	NA	NA	NA	NA	1169	2919	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGGAAAAA	8970	False	NA	NA	False	NA	NA	NA	44883713	44880136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_44880100_44883700
ES.30829.10	chr7	-	1156	8	NIC	ENSMUSG00000030798.16	novel	1268	9	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	29.357055960942	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTGGTAAA	4188	False	NA	-15	True	AATAAA	-23	NA	44888495	44883057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888383
ES.30829.11	chr7	-	3999	5	NIC	ENSMUSG00000030798.16	novel	2541	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	78	junction_4	4.81534007106456	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGTA	4202	False	NA	-17	True	AATAAA	-21	NA	44888481	44883059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44887997_44888083
ES.30829.12	chr7	-	1761	7	NIC	ENSMUSG00000030798.16	novel	1227	8	NA	NA	56	0	intron_retention	FALSE	canonical	3	49	junction_1	14.6363322667334	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	4519	False	NA	-18	True	AATAAA	-20	NA	44888164	44883060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44883403_44884107_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ES.30829.13	chr7	-	2882	5	ISM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-255	1	-13	-1	intron_retention	FALSE	canonical	3	86	junction_3	1.92028643696715	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTGG	4189	False	NA	-19	True	AATAAA	-19	NA	44888494	44883061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923
ES.30829.14	chr7	-	3698	5	NIC	ENSMUSG00000030798.16	novel	1268	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6	junction_4	35.6957630538976	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTTTTTTTTTTTT	4198	False	NA	-22	True	AATAAA	-16	NA	44888485	44883064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44887997_44888383
ES.30829.15	chr7	-	5343	2	NIC	ENSMUSG00000030798.16	novel	1268	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	86	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTTTTTTTTTTTT	4193	False	NA	-22	True	AATAAA	-16	NA	44888490	44883064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44886501_44886583
ES.30829.16	chr7	-	1245	9	FSM	ENSMUSG00000030798.16	ENSMUST00000033063.15	1268	9	21	2	21	0	multi-exon	FALSE	canonical	3	15	junction_8	25.228641957109	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTTTTTTTTTTTTT	4165	False	NA	-24	True	AATAAA	-14	NA	44888518	44883066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083_44888159_44888383
ES.30829.17	chr7	-	2117	6	NIC	ENSMUSG00000030798.16	novel	743	7	NA	NA	-4	-116	intron_retention	FALSE	canonical	3	6	junction_5	33.1445319773866	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAAGTATCTCCTTT	4198	False	NA	NA	False	NA	NA	NA	44888485	44883430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888383
ES.30829.18	chr7	-	2100	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	-42	483	-17	50	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCTCTTTTGCAGACT	4402	False	NA	NA	False	AATAAA	-24	NA	44888281	44883543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ES.30829.2	chr7	-	2688	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	81	-228	62	223	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGGGAAAACATTATCT	4525	False	NA	NA	False	ATTAAA	-33	NA	44888158	44882832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ES.30829.3	chr7	-	1449	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	-4	-218	-4	218	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAGCTGGGAAAACAT	4415	False	NA	NA	False	ATTAAA	-28	NA	44888268	44882837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ES.30829.4	chr7	-	2715	6	NIC	ENSMUSG00000030798.16	novel	743	7	NA	NA	-9	218	intron_retention	FALSE	canonical	3	6	junction_5	33.1445319773866	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAGCTGGGAAAACAT	4193	False	NA	NA	False	ATTAAA	-28	NA	44888490	44882837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888383
ES.30829.6	chr7	-	2634	7	NIC	ENSMUSG00000030798.16	novel	1268	9	NA	NA	-2	11	intron_retention	FALSE	canonical	3	15	junction_6	27.0164558906028	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAAAATAGCTTTATTC	4142	False	NA	-2	True	AATAAA	-36	NA	44888541	44883044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083_44888159_44888383
ES.30829.8	chr7	-	2130	7	FSM	ENSMUSG00000030798.16	ENSMUST00000211373.2	1428	7	-162	-540	21	2	multi-exon	FALSE	canonical	3	58	junction_1	11.4661337085446	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTGGTAAAAATA	4223	False	NA	-11	True	AATAAA	-27	NA	44888460	44883053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ES.30829.9	chr7	-	2615	6	NNC	ENSMUSG00000030798.16	novel	2541	6	NA	NA	-10	2	intron_retention	FALSE	canonical	0	0	junction_1	40.5659956120887	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTGGTAAAAATA	4434	False	NA	-11	True	AATAAA	-27	NA	44888249	44883053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44885129_44885538_44885644_44886425_44886501_44886583_44886709_44887927_44887997_44888083
ES.3083.1	chr10	-	1034	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	38	12	38	-12	multi-exon	FALSE	canonical	3	1606	junction_1	82	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTCATCTCTGTG	1291	False	NA	-5	True	AATAAA	-15	NA	71180746	71166321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71166957_71172043_71172250_71180553
ES.3083.2	chr10	-	871	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	0	213	0	-213	multi-exon	FALSE	canonical	3	1606	junction_1	82	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGAATCTTTTCTTATC	1253	False	NA	1	True	ATTAAA	-44	NA	71180784	71166522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71166957_71172043_71172250_71180553
ES.3083.3	chr10	-	5833	2	NIC	ENSMUSG00000037710.9	novel	1084	3	NA	NA	97	-241	intron_retention	FALSE	canonical	3	1770	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGTACATTGTACTTG	1350	False	NA	-27	True	ATTAAA	-16	NA	71180687	71166550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_71172250_71180553
ES.3083.4	chr10	-	947	3	NNC	ENSMUSG00000037710.9	novel	1084	3	NA	NA	163	-243	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_2	794.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACATGTACATTGTACT	1416	False	NA	-29	True	ATTAAA	-14	NA	71180621	71166552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_71166957_71172043_71172250_71180284
ES.3083.5	chr10	-	635	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	95	354	95	-354	multi-exon	FALSE	canonical	3	1606	junction_1	82	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGTGCTATATGGGTT	1348	False	NA	-140	True	AAGAAA	-10	NA	71180689	71166663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_71166957_71172043_71172250_71180553
ES.3083.6	chr10	-	3076	1	Intergenic	novelGene_2407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAAGAGCTGTGGAAAC	6446	False	NA	NA	False	AGTAAA	-14	NA	71175591	71172515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_71172500_71175600
ES.30830.1	chr7	+	2414	10	ISM	ENSMUSG00000094152.6	ENSMUST00000213347.2	2865	13	1	4299	1	-3621	intron_retention	FALSE	canonical	0	0	junction_4	5.51317165780234	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGGTGTCTCATACA	NA	False	NA	NA	False	NA	NA	NA	44890509	44918492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_44890728_44906859_44906961_44908426_44908903_44909283_44909442_44909624_44909752_44909899_44910076_44910240_44910352_44910496_44910739_44917438_44917623_44917871
ES.30830.2	chr7	+	179	1	Intergenic	novelGene_25392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTTAT	NA	False	NA	NA	False	NA	NA	NA	44891981	44892160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44892000_44892200
ES.30831.1	chr7	-	193	1	Intergenic	novelGene_25393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTATTCTTCCTGG	1384	False	NA	NA	False	NA	NA	NA	44900199	44900006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44900000_44900200
ES.30832.1	chr7	+	1149	1	NIC	ENSMUSG00000094152.6	novel	2865	13	NA	NA	4063	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGACTGCGTGAGGCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	44921636	44922785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_44921600_44922800
ES.30833.1	chr7	-	183	1	Intergenic	novelGene_25394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGGATGTAAA	4122	False	NA	NA	False	NA	NA	NA	44925410	44925227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_44925200_44925400
ES.30834.1	chr7	+	12961	11	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	-19440	109	multi-exon	FALSE	non_canonical	0	0	junction_1	0	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGCAGTGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	44954948	44975150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_44958143_44958521_44958648_44959694_44964102_44964407_44964520_44966200_44966345_44966429_44966559_44967458_44967595_44967763_44968779_44971211_44971309_44971419_44971615_44971744
ES.30834.2	chr7	+	1753	2	Antisense	novelGene_ENSMUSG00000038260.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	44959251	44965909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_44960895_44965799
ES.30834.3	chr7	+	158	1	Intergenic	novelGene_25395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGAATTGTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	44963565	44963723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_44963600_44963700
ES.30834.4	chr7	+	4082	3	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	-6387	35	multi-exon	FALSE	non_canonical	0	0	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	44968001	44975076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_44968107_44968666_44968779_44971211
ES.30834.5	chr7	+	5158	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	-4399	-106	-4399	106	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCTGGGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	44969989	44975147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_44970000_44975100
ES.30834.6	chr7	+	513	2	Genic_Genomic	ENSMUSG00000046721.12	novel	653	1	NA	NA	-22	36	multi-exon	FALSE	canonical	0	0	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	44974366	44975077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_44974614_44974811
ES.30835.1	chr7	-	3641	21	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-34	66	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	34.5021738445565	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCATATGTGTCTTT	3156	False	NA	NA	False	NA	NA	NA	44983238	44952512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44982805_44982877_44983110
ES.30835.10	chr7	-	4186	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	32.3741151745238	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTTGGCTCCTGTGGA	3196	False	NA	-2	True	AATAAA	-23	NA	44983198	44952773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44977019_44977144_44977320_44982805_44982877_44983110
ES.30835.11	chr7	-	4516	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	30.0187152271527	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3176	False	NA	-5	True	AATAAA	-20	NA	44983218	44952776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953572_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.13	chr7	-	4052	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.6351889155794	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3191	False	NA	-5	True	AATAAA	-20	NA	44983203	44952776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967453_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.14	chr7	-	4106	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	9	-3	intron_retention	FALSE	canonical	3	102	junction_18	16.8281652463261	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3211	False	NA	-5	True	AATAAA	-20	NA	44983183	44952776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.15	chr7	-	7242	21	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_7	34.8473815372117	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3234	False	NA	-5	True	AATAAA	-20	NA	44983160	44952776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44958143_44958521_44958655_44959700_44960124_44964018_44964089_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.17	chr7	-	4037	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	40.344845980896	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACATGCTTGGCTCCTGT	3190	False	NA	-5	True	AATAAA	-20	NA	44983204	44952776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954768_44954965_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.18	chr7	-	4538	9	ISM	ENSMUSG00000038260.11	ENSMUST00000211743.2	3673	23	20185	-4	-1903	-4	3prime_fragment	FALSE	canonical	3	129	junction_7	18.1659021245849	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCACATGCTTGGCTCCTG	NA	False	NA	-6	True	AATAAA	-19	NA	44962895	44952777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700
ES.30835.2	chr7	-	4257	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-23	0	-12	0	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGGGTGGGCGCTGCTG	3178	False	NA	NA	False	NA	NA	NA	44983216	44952578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.20	chr7	-	3867	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_22	32.8910672711936	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGCACATGCTTGGCTC	3191	False	NA	-9	True	AATAAA	-16	NA	44983203	44952780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44982805_44982877_44983110
ES.30835.21	chr7	-	4693	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-9	1	intron_retention	FALSE	canonical	0	0	junction_20	39.9252609888571	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGCACATGCTTGGCTC	3181	False	NA	-9	True	AATAAA	-16	NA	44983213	44952780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953572_44954032_44954139_44954218_44954292_44954371_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976717_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.22	chr7	-	3912	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	40.9047951764949	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3203	False	NA	-10	True	AATAAA	-15	NA	44983191	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.23	chr7	-	4010	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.5831202039065	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3175	False	NA	-10	True	AATAAA	-15	NA	44983219	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954759_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.24	chr7	-	3976	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	33.1958728388782	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3178	False	NA	-10	True	AATAAA	-15	NA	44983216	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.25	chr7	-	3816	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	42.0336079417096	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3237	False	NA	-10	True	AATAAA	-15	NA	44983157	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971809_44975986_44976171_44976400_44976565_44977144_44977320_44982805_44982877_44983110
ES.30835.26	chr7	-	4159	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-9	0	intron_retention	FALSE	canonical	1	5	junction_4	40.1496256341616	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3181	False	NA	-10	True	AATAAA	-15	NA	44983213	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954768_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.27	chr7	-	4008	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	32.5697701950068	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3202	False	NA	-10	True	AATAAA	-15	NA	44983192	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976717_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.28	chr7	-	6164	19	NNC	ENSMUSG00000038260.11	novel	3673	23	NA	NA	8402	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.4003798650644	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	124	False	NA	-10	True	AATAAA	-15	NA	44974678	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964216_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744
ES.30835.29	chr7	-	3974	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.643273937112	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3256	False	NA	-10	True	AATAAA	-15	NA	44983138	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958649_44959696_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.3	chr7	-	4038	23	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	33.9109492544641	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGGGTGGGCGCTGCTG	3206	False	NA	NA	False	NA	NA	NA	44983188	44952578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.30	chr7	-	578	4	FSM	ENSMUSG00000038260.11	ENSMUST00000209506.2	609	4	23	8	-10	0	multi-exon	FALSE	canonical	1	1	junction_3	79.7342809308239	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	NA	False	NA	-10	True	AATAAA	-15	NA	44954776	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954712
ES.30835.31	chr7	-	4127	23	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_5	40.1020650320493	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3191	False	NA	-10	True	AATAAA	-15	NA	44983203	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44977320_44982805_44982877_44983110
ES.30835.33	chr7	-	6787	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_16	30.6096220215549	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3190	False	NA	-10	True	AATAAA	-15	NA	44983204	44952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.34	chr7	-	4199	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_6	42.4416423536022	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3189	False	NA	-11	True	AATAAA	-14	NA	44983205	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954919_44957667_44957846_44957967_44958094_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982875_44983110
ES.30835.35	chr7	-	4130	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.7617892146521	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3192	False	NA	-11	True	AATAAA	-14	NA	44983202	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954759_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44977019_44977144_44977320_44982805_44982877_44983110
ES.30835.37	chr7	-	4191	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.606209999869	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3201	False	NA	-11	True	AATAAA	-14	NA	44983193	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960285_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.39	chr7	-	3938	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.1708506166635	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3226	False	NA	-11	True	AATAAA	-14	NA	44983168	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954365_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.4	chr7	-	3628	21	NNC	ENSMUSG00000038260.11	novel	3673	23	NA	NA	6626	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.5133777610635	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGGGTGGGCGCTGCT	9940	False	NA	NA	False	NA	NA	NA	44976454	44952579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960139_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400
ES.30835.40	chr7	-	4073	23	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	1	-1	intron_retention	FALSE	canonical	2	2	junction_21	33.5626034018137	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3191	False	NA	-11	True	AATAAA	-14	NA	44983203	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44982805_44982877_44983110
ES.30835.41	chr7	-	4255	22	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-13	-1	intron_retention	FALSE	canonical	2	2	junction_20	34.3242508295715	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3177	False	NA	-11	True	AATAAA	-14	NA	44983217	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44982805_44982877_44983110
ES.30835.42	chr7	-	4074	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	32.6231640607304	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCGCACATGCTTGGC	3175	False	NA	-11	True	AATAAA	-14	NA	44983219	44952782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967613_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.43	chr7	-	6753	21	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_5	44.705564530604	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTCGCACATGCTTG	3193	False	NA	-13	True	AATAAA	-12	NA	44983201	44952784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44957846_44957967_44958094_44958521_44958655_44959700_44960124_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.44	chr7	-	4232	26	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	44.660425434606	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTCGCACATGCTTG	3208	False	NA	-13	True	AATAAA	-12	NA	44983186	44952784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44953319_44953572_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982846_44982877_44983110
ES.30835.46	chr7	-	4168	24	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	13	junction_16	31.1628444360577	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTCGCACATGCTTG	3225	False	NA	-13	True	AATAAA	-12	NA	44983169	44952784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.47	chr7	-	3534	22	NNC	ENSMUSG00000038260.11	novel	685	5	NA	NA	6228	-333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.6980290131652	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCCCACAGGTCTAT	9542	False	NA	NA	False	NA	NA	NA	44976852	44953333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953572_44954032_44954139_44954218_44954292_44954371_44954505_44954759_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695
ES.30835.48	chr7	-	3428	17	ISM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-28	6414	-17	-2946	5prime_fragment	FALSE	canonical	3	102	junction_11	12.1203277080284	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTCTGCAGCCTGTAA	3173	False	NA	NA	False	NA	NA	NA	44983221	44958992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.5	chr7	-	4699	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.0187152271527	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGGGTGGGCGCTGCT	3190	False	NA	NA	False	NA	NA	NA	44983204	44952579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953572_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.6	chr7	-	3587	20	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-5	83	intron_retention	FALSE	canonical	1	1	junction_18	44.109408171009	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCTGTTTGGGTGGCT	3196	False	NA	81	True	NA	NA	NA	44983198	44952690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44968105_44968665_44968779_44971211_44971308_44971422_44971615_44971744_44971807_44982805_44982877_44983110
ES.30835.7	chr7	-	4345	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	-23	4	intron_retention	FALSE	canonical	3	102	junction_19	18.71717668917	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTCCTGTGGAGCAG	3167	False	NA	2	True	AATAAA	-27	NA	44983227	44952769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44977320_44982805_44982877_44983110
ES.30835.8	chr7	-	4087	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-45	192	-34	3	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTCCTGTGGAGCA	3156	False	NA	1	True	AATAAA	-26	NA	44983238	44952770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30835.9	chr7	-	4241	24	NIC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	7	2	intron_retention	FALSE	canonical	3	102	junction_18	18.7580354552359	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGGCTCCTGTGGAGC	3209	False	NA	0	True	AATAAA	-25	NA	44983185	44952771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ES.30836.1	chr7	-	1962	7	NNC	ENSMUSG00000003863.19	novel	4575	29	NA	NA	-1062	3962	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.1982552171754	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTATTCTGGTCACTCC	5924	False	NA	NA	False	NA	NA	NA	44991646	44984583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44985864_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
ES.30836.10	chr7	-	4845	30	NNC	ENSMUSG00000003863.19	novel	4647	30	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	19.5049309293537	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCTAGCTTTTGTTCT	2896	False	NA	-5	True	NA	NA	NA	45016423	44988552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976_44993004_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582_45004715_45005561_45005646_45005733_45005869_45005964_45006112_45007182_45007407_45008211_45008287_45008690_45008766_45009483_45009649_45009959_45010062_45010988_45011244_45016082
ES.30836.12	chr7	-	4730	29	NIC	ENSMUSG00000003863.19	novel	4647	30	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	19.3418165472362	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGGTGACCAGCCT	2836	False	NA	-2	True	NA	NA	NA	45016483	44988698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582_45004715_45005561_45005646_45005733_45005869_45005964_45006112_45007182_45007405_45008211_45008287_45008690_45008766_45009483_45009649_45009959_45010062_45010988_45011244_45016082
ES.30836.13	chr7	-	3303	18	NIC	ENSMUSG00000003863.19	novel	3899	26	NA	NA	4760	0	intron_retention	FALSE	canonical	3	8	junction_11	19.0131988393275	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGGTGACCAGCCT	9566	False	NA	-2	True	NA	NA	NA	45004777	44988698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
ES.30836.15	chr7	-	3136	20	NNC	ENSMUSG00000003863.19	novel	3899	26	NA	NA	4659	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	19.8658938790125	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGGTGACCAGCCT	9465	False	NA	-2	True	NA	NA	NA	45004878	44988698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582_45004715_45004811
ES.30836.16	chr7	-	1644	8	NIC	ENSMUSG00000003863.19	novel	3899	26	NA	NA	-2495	3	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	24.4156189554881	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTGGTGGTGACCAG	4491	False	NA	-5	True	NA	NA	NA	44993079	44988701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989480_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
ES.30836.17	chr7	-	1426	7	NNC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	-1067	2	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	15.0711276581711	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTGGTGGTGACCA	5919	False	NA	-6	True	NA	NA	NA	44991651	44988702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
ES.30836.19	chr7	-	1625	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23039	153	-2515	2	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTGGTGGTGACCA	4471	False	NA	-6	True	NA	NA	NA	44993099	44988702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
ES.30836.2	chr7	-	3326	19	NIC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	4718	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	19.3645979643521	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTTGTTCTTAAGAT	9524	False	NA	1	True	NA	NA	NA	45004819	44988546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
ES.30836.20	chr7	-	1397	4	ISM	ENSMUSG00000003863.19	ENSMUST00000210248.2	3899	26	4659	13431	4659	11350	internal_fragment	FALSE	canonical	3	20	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	9465	False	NA	NA	False	NA	NA	NA	45004878	45002129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45003088_45004120_45004201_45004290_45004354_45004582
ES.30836.4	chr7	-	3949	17	NIC	ENSMUSG00000003863.19	novel	4647	30	NA	NA	4753	0	intron_retention	FALSE	canonical	3	8	junction_10	19.2284782289187	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAGCTTTTGTTCTTA	9559	False	NA	-3	True	NA	NA	NA	45004784	44988550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582
ES.30836.5	chr7	-	3490	19	NIC	ENSMUSG00000003863.19	novel	4647	30	NA	NA	3874	0	intron_retention	FALSE	canonical	2	5	junction_18	19.1347560446662	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAGCTTTTGTTCTTA	8680	False	NA	-3	True	NA	NA	NA	45005663	44988550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582_45004715_45005561
ES.30836.7	chr7	-	1592	7	NNC	ENSMUSG00000003863.19	novel	3899	26	NA	NA	-1043	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	23.6196716507425	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAGCTTTTGTTCTTA	5943	False	NA	-3	True	NA	NA	NA	44991627	44988550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_44989480_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
ES.30836.8	chr7	-	4482	28	NIC	ENSMUSG00000003863.19	novel	4647	30	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	18.6702671424773	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAGCTTTTGTTCTTA	8109	False	NA	-3	True	NA	NA	NA	45011210	44988550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_44989480_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44993164_44993228_44996155_44996357_44996847_44996930_44997151_44997246_44997665_44997794_44997885_44998050_44999492_44999716_45001510_45001699_45002942_45003088_45004120_45004201_45004290_45004354_45004582_45004715_45005561_45005646_45005733_45005869_45005964_45006112_45007182_45007405_45008211_45008287_45008690_45008766_45009483_45009649_45009959_45010062_45010988
ES.30837.1	chr7	+	3789	1	FSM	ENSMUSG00000110070.2	ENSMUST00000210360.2	528	1	-944	-2317	-944	2317	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAGTCGAAGAGTGCT	59	False	NA	NA	False	AATAAA	-12	NA	45016656	45020445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45016700_45020400
ES.30838.1	chr7	-	735	6	FSM	ENSMUSG00000003872.10	ENSMUST00000003971.10	735	6	-1	1	-1	-1	multi-exon	FALSE	canonical	2	8	junction_1	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTGTCTTGTGTGTCT	7941	False	NA	0	True	TTTAAA	-15	NA	45020008	45017315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45017423_45017727_45017892_45018564_45018775_45019338_45019411_45019550_45019670_45019945
ES.30839.1	chr7	-	1759	1	Intergenic	novelGene_25396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGCTTTTGGTCCCCC	4817	False	NA	NA	False	NA	NA	NA	45023132	45021373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45021400_45023100
ES.3084.1	chr10	+	211	1	Intergenic	novelGene_2408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGGAGATTAAAAGC	1289	False	NA	NA	False	ATTAAA	-7	NA	71182665	71182876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71182700_71182900
ES.30840.1	chr7	+	2085	1	Antisense	novelGene_ENSMUSG00000063511.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAGGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45033168	45035253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_45033200_45035300
ES.30840.2	chr7	+	3035	1	Antisense	novelGene_ENSMUSG00000063511.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCGGGCAGTGGTGGTGC	NA	False	NA	NA	False	AATACA	-27	NA	45033169	45036204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_45033200_45036200
ES.30840.3	chr7	+	2463	1	Intergenic	novelGene_25397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCAACTGACCAAGTAC	NA	False	NA	NA	False	NA	NA	NA	45033909	45036372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45033900_45036400
ES.30841.1	chr7	-	2608	1	Genic_Genomic	ENSMUSG00000063511.12	novel	NA	NA	NA	NA	4208	1951	mono-exon	FALSE	NA	NA	NA	NA	NA	983	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGGGCCATCTCTGAG	1416	False	NA	NA	False	NA	NA	NA	45026533	45023925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_45023900_45026500
ES.30841.10	chr7	-	842	3	NNC	ENSMUSG00000063511.12	novel	707	9	NA	NA	3887	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	730	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	1095	False	NA	-1	True	AATAAA	-24	NA	45026854	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026604_45026661_45026703_45026779
ES.30841.11	chr7	-	6403	3	ISM	ENSMUSG00000063511.12	ENSMUST00000209993.2	707	9	6115	-692	1564	-1	intron_retention	FALSE	canonical	3	1406	junction_2	27	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	NA	False	NA	-1	True	AATAAA	-24	NA	45035630	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45026703_45026779_45026868_45030140
ES.30841.12	chr7	-	10295	3	NIC	ENSMUSG00000063511.12	novel	707	9	NA	NA	847	-1	intron_retention	FALSE	canonical	3	14	junction_2	723	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	NA	False	NA	-1	True	AATAAA	-24	NA	45036347	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45030043_45030140
ES.30841.13	chr7	-	1301	10	NNC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	471.580505152096	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9862	False	NA	-1	True	AATAAA	-24	NA	45044105	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026388_45026452_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082
ES.30841.14	chr7	-	4182	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	44	junction_10	656.077503043657	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9039	False	NA	-1	True	AATAAA	-24	NA	45045168	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.15	chr7	-	4723	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	13	-1	intron_retention	TRUE	canonical	0	0	junction_4	673.007548248903	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9104	False	NA	-1	True	AATAAA	-24	NA	45045103	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45029919_45030043_45030140_45030616_45030671_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.16	chr7	-	4640	10	NNC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	15	-2	intron_retention	FALSE	non_canonical	3	50	junction_1	457.40937171568	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGATGTCTTACTGCA	9056	False	NA	-2	True	AATAAA	-23	NA	45045151	45025878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026594_45026656_45026703_45026779_45026868_45030140_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.17	chr7	-	1603	10	NNC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	52	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	471.580505152096	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGATGTCTTACTGCA	9278	False	NA	-2	True	AATAAA	-23	NA	45044929	45025878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044825
ES.30841.18	chr7	-	3977	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	1	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	572.999092494918	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGATGTCTTACTGC	9075	False	NA	-3	True	AATAAA	-22	NA	45045132	45025879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026582_45026668_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.2	chr7	-	2694	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-13	950	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	573.136842298591	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCATTGGGATTTCTT	9112	False	NA	NA	False	AATAAA	-28	NA	45045095	45024926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.20	chr7	-	3074	11	FSM	ENSMUSG00000063511.12	ENSMUST00000211290.2	3035	11	-33	-6	-16	2	multi-exon	FALSE	canonical	2	5	junction_3	571.982875617793	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCATGTGATGTCTTACTG	9058	False	NA	-4	True	AATAAA	-21	NA	45045149	45025880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45031248_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.24	chr7	-	1763	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	570.766230605841	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGCATGTGATGTCTTA	9066	False	NA	-7	True	AATAAA	-18	NA	45045141	45025883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45032548_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.26	chr7	-	2749	3	NNC	ENSMUSG00000063511.12	novel	707	9	NA	NA	-1268	-1	intron_retention	FALSE	canonical	0	0	junction_1	703	980	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGCATGTGATGTCTTA	NA	False	NA	-7	True	AATAAA	-18	NA	45032009	45025883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026676_45026779_45026868_45030140
ES.30841.27	chr7	-	3321	2	NIC	ENSMUSG00000063511.12	novel	462	4	NA	NA	832	-1	intron_retention	FALSE	canonical	3	1406	junction_1	0	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGCATGTGATGTCTTA	NA	False	NA	-7	True	AATAAA	-18	NA	45032477	45025883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026868_45030140
ES.30841.29	chr7	-	1613	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	50	junction_1	434.105298286026	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGGCATGTGATGTCTT	9092	False	NA	-8	True	AATAAA	-17	NA	45045115	45025884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026594_45026656_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.3	chr7	-	2735	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	-53	-947	-53	947	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCATTGGGATTT	8988	False	NA	NA	False	AATAAA	-25	NA	45045219	45024929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.30	chr7	-	4014	11	NNC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	15	0	intron_retention	FALSE	non_canonical	3	50	junction_1	562.934241275124	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9056	False	NA	-9	True	AATAAA	-16	NA	45045151	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026594_45026656_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.31	chr7	-	1792	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	573.136842298591	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9055	False	NA	-9	True	AATAAA	-16	NA	45045152	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.32	chr7	-	4094	11	NNC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_3	662.188802381919	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9099	False	NA	-9	True	AATAAA	-16	NA	45045108	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45028698_45028759_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.33	chr7	-	1628	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	448.369724669273	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9064	False	NA	-9	True	AATAAA	-16	NA	45045143	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026595_45026669_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.34	chr7	-	6301	9	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1192	junction_8	145.465631679789	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9091	False	NA	-9	True	AATAAA	-16	NA	45045116	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.35	chr7	-	1686	10	NNC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	468.433823409006	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9075	False	NA	-9	True	AATAAA	-16	NA	45045132	45025885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026697_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.37	chr7	-	3121	12	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	694.704039486844	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9085	False	NA	-10	True	AATAAA	-15	NA	45045122	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45031248_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.38	chr7	-	2329	4	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-899	0	intron_retention	FALSE	non_canonical	0	0	junction_1	675.882304021114	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	NA	False	NA	-10	True	AATAAA	-15	NA	45031640	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026595_45026669_45026703_45026779_45026868_45030140
ES.30841.4	chr7	-	5554	9	NIC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	17	935	intron_retention	FALSE	canonical	3	1192	junction_8	137.967330825091	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGCTTAGTAAACAGAT	9142	False	NA	NA	False	AATAAA	-13	NA	45045065	45024941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.40	chr7	-	5093	6	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-452	0	intron_retention	FALSE	canonical	2	7	junction_2	753.983395042623	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	NA	False	NA	-10	True	AATAAA	-15	NA	45037646	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45029919_45030043_45030140_45033310_45036666_45036730_45036812
ES.30841.41	chr7	-	1355	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	448.369724669273	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9135	False	NA	-10	True	AATAAA	-15	NA	45045072	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026249_45026524_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.42	chr7	-	1596	10	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	468.433823409006	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9074	False	NA	-10	True	AATAAA	-15	NA	45045133	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026607_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.43	chr7	-	1876	12	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	696.226559021992	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9093	False	NA	-10	True	AATAAA	-15	NA	45045114	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45029919_45030043_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.44	chr7	-	1586	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	572.19951939861	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9111	False	NA	-10	True	AATAAA	-15	NA	45045096	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026594_45026656_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041692_45041750_45044082_45044240_45044932
ES.30841.45	chr7	-	4057	10	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_1	668.022916735609	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9104	False	NA	-10	True	AATAAA	-15	NA	45045103	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026705_45026779_45026868_45030140_45030243_45032548_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45044240_45044932
ES.30841.46	chr7	-	1727	12	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_11	634.499268962581	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9056	False	NA	-10	True	AATAAA	-15	NA	45045151	45025886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026594_45026656_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
ES.30841.48	chr7	-	1590	10	NNC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	471.580505152096	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGTGGGCATGTGATGT	9067	False	NA	-11	True	AATAAA	-14	NA	45045140	45025887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45045040
ES.30841.5	chr7	-	4095	10	FSM	ENSMUSG00000063511.12	ENSMUST00000211366.2	4008	10	-73	-14	11	5	multi-exon	FALSE	canonical	3	95	junction_3	443.86935014709	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTACTGCACTTGCTG	9052	False	NA	5	True	AATAAA	-30	NA	45045155	45025871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.6	chr7	-	1801	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	-65	-1	-65	1	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTCTTACTGCACTT	8976	False	NA	1	True	AATAAA	-26	NA	45045231	45025875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.7	chr7	-	4705	9	NIC	ENSMUSG00000063511.12	novel	1735	10	NA	NA	15	0	intron_retention	FALSE	canonical	3	1192	junction_8	137.967330825091	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGTCTTACTGCACT	9056	False	NA	0	True	AATAAA	-25	NA	45045151	45025876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.8	chr7	-	4195	11	NNC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	-4	0	intron_retention	FALSE	canonical	2	7	junction_2	659.10030344402	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGTCTTACTGCACT	9070	False	NA	0	True	AATAAA	-25	NA	45045137	45025876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45026703_45026779_45026868_45029919_45030043_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ES.30841.9	chr7	-	3683	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	650.749729158607	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	9106	False	NA	-1	True	AATAAA	-24	NA	45045101	45025877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45032548_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45042128_45044240_45044932
ES.30842.1	chr7	-	177	1	Intergenic	novelGene_25398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAATATTT	6158	False	NA	NA	False	NA	NA	NA	45050901	45050724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45050700_45050900
ES.30843.1	chr7	+	158	1	Intergenic	novelGene_25399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	45053540	45053698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45053500_45053700
ES.30844.1	chr7	+	3364	2	FSM	ENSMUSG00000038201.11	ENSMUST00000107774.3	2182	2	702	-1884	702	1884	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGTGTTGAGTTATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	45055778	45061071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45056440_45058368
ES.30845.1	chr7	-	1373	1	Antisense	novelGene_ENSMUSG00000038201.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTATTCCTTTGTGT	5976	False	NA	NA	False	AATGAA	-28	NA	45056438	45055065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_45055100_45056400
ES.30845.2	chr7	-	1164	2	Antisense	novelGene_ENSMUSG00000038201.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTGTTTATTCCTTTG	5985	False	NA	NA	False	AATGAA	-25	NA	45056429	45055068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_45055680_45055876
ES.30846.1	chr7	-	167	1	Intergenic	novelGene_25400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	45062489	45062322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45062300_45062500
ES.30847.1	chr7	+	1476	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	-37	524	-37	-524	multi-exon	FALSE	canonical	3	16	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGTTGTGGTATGTA	600	False	NA	NA	False	NA	NA	NA	45063081	45066079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45063213_45064154_45064279_45064858
ES.30847.2	chr7	+	1954	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	7	2	7	-2	multi-exon	FALSE	canonical	3	16	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTCCGCCTTG	644	False	NA	NA	False	NA	NA	NA	45063125	45066601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45063213_45064154_45064279_45064858
ES.30847.3	chr7	+	1371	3	NNC	ENSMUSG00000074121.4	novel	989	3	NA	NA	-4	-522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTGTGGTATGTACT	842	False	NA	NA	False	NA	NA	NA	45063323	45066081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45063348_45064154_45064279_45064858
ES.30847.4	chr7	+	1421	3	NNC	ENSMUSG00000074121.4	novel	989	3	NA	NA	455	-518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGTATGTACTGTAA	1301	False	NA	NA	False	NA	NA	NA	45063782	45066085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45063853_45064154_45064279_45064858
ES.30848.1	chr7	+	2293	6	FSM	ENSMUSG00000118462.2	ENSMUST00000238591.2	2278	6	-5	-10	-5	1	multi-exon	TRUE	canonical	0	0	junction_4	1.01980390271856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTCTTTAGTAGG	5290	False	NA	NA	False	AATAAA	-16	NA	45067771	45071279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45067950_45068137_45068309_45068402_45068568_45069133_45069253_45069466_45070807_45070959
ES.30849.1	chr7	+	3743	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	-47	-18	-47	18	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTGTGGTGGGTCT	980	False	NA	43	True	AATACA	-39	NA	45084220	45106061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.10	chr7	+	4478	9	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	9	-3675	intron_retention	FALSE	canonical	3	89	junction_1	10.7812047100498	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTTGTGGACTTGCT	1069	False	NA	NA	False	NA	NA	NA	45084309	45097576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321
ES.30849.11	chr7	+	3650	16	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.4333877741277	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACTGTGGCTGGACATAA	1069	False	NA	21	True	AATACA	-17	NA	45084309	45106039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089107_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.12	chr7	+	3128	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	42	508	9	264	multi-exon	FALSE	canonical	3	89	junction_1	61.1041369757855	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAACCCACGACTGCGA	1069	False	NA	NA	False	NA	NA	NA	45084309	45105535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.14	chr7	+	806	3	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	66	18155	33	-13363	5prime_fragment	FALSE	canonical	3	89	junction_1	16.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCAGAAGTGTCAACCT	1093	False	NA	NA	False	NA	NA	NA	45084333	45087888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45084595_45085955_45086138_45087525
ES.30849.17	chr7	+	3277	14	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	3148	2	3115	-2	3prime_fragment	FALSE	canonical	3	93	junction_6	62.4571805982629	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	4175	False	NA	23	True	AATACA	-19	NA	45087415	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.18	chr7	+	3170	14	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	3135	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.8197834800396	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGCTCTTGTGGTGTGGT	4195	False	NA	37	True	AATACA	-33	NA	45087435	45106055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45087617_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.19	chr7	+	3130	13	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	4495	-13	4462	13	3prime_fragment	FALSE	canonical	3	93	junction_5	63.720036531342	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGGTGTGGTG	5522	False	NA	38	True	AATACA	-34	NA	45088762	45106056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.2	chr7	+	3014	14	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	-21	3730	-21	773	5prime_fragment	FALSE	canonical	3	89	junction_1	52.297284032345	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAAAGAGGATA	1006	False	NA	NA	False	NA	NA	NA	45084246	45102313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174
ES.30849.20	chr7	+	3045	13	NNC	ENSMUSG00000003865.17	novel	2681	15	NA	NA	4464	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.2154857969459	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	5524	False	NA	23	True	AATACA	-19	NA	45088764	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104532
ES.30849.21	chr7	+	2908	12	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	4958	-14	4925	14	3prime_fragment	FALSE	canonical	3	93	junction_4	64.8566123482352	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGGTGTGGTGG	5985	False	NA	39	True	AATACA	-35	NA	45089225	45106057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.22	chr7	+	2862	12	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	4956	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	77.1419213726094	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	6016	False	NA	25	True	AATACA	-21	NA	45089256	45106043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097430_45097671_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.23	chr7	+	238	1	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	-5415	-9400	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCCCAACGGGCTGAA	8373	False	NA	NA	False	AAGAAA	-42	NA	45091613	45091851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45091600_45091900
ES.30849.24	chr7	+	201	1	Intergenic	novelGene_25401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGGGGGCT	NA	False	NA	NA	False	AAGAAA	-9	NA	45096332	45096533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45096300_45096500
ES.30849.25	chr7	+	154	1	Intergenic	novelGene_25402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	45096691	45096845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45096700_45096800
ES.30849.26	chr7	+	2231	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	-23	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	NA	False	NA	23	True	AATACA	-19	NA	45097005	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.27	chr7	+	2061	8	NNC	ENSMUSG00000003865.17	novel	480	5	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	115.261194064363	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACTGTGGCTGGACATAA	NA	False	NA	21	True	AATACA	-17	NA	45097015	45106039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45097078_45097321_45097453_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464_45105600_45105774
ES.30849.28	chr7	+	2204	6	ISM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	13021	-10	134	10	3prime_fragment	FALSE	canonical	3	219	junction_3	11.2605506082074	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAAGCTCTTGTGGTGTG	NA	False	NA	35	True	AATACA	-31	NA	45097288	45106053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.29	chr7	+	2116	6	NNC	ENSMUSG00000003865.17	novel	2681	15	NA	NA	175	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	90.7625473419516	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	NA	False	NA	23	True	AATACA	-19	NA	45097329	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45097436_45097711_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.3	chr7	+	3693	16	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	68.1744820295688	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	1009	False	NA	23	True	AATACA	-19	NA	45084249	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097430_45097671_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.4	chr7	+	3064	2	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	-11	-12543	intron_retention	FALSE	canonical	3	122	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTAACCTCTGGGGAC	1016	False	NA	NA	False	NA	NA	NA	45084256	45088708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45086138_45087525
ES.30849.5	chr7	+	5035	15	NIC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	93	junction_7	60.8891599212731	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	1029	False	NA	23	True	AATACA	-19	NA	45084269	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.7	chr7	+	4955	15	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	9	-2	intron_retention	FALSE	canonical	2	9	junction_12	68.7099790750208	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGGCTGGACATAAGC	1036	False	NA	23	True	AATACA	-19	NA	45084276	45106041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101247_45101339_45104245_45104327_45104464
ES.30849.8	chr7	+	2738	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	16	924	16	-152	multi-exon	FALSE	canonical	3	89	junction_1	61.1041369757855	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGCTGTGGCTTCTTC	1043	False	NA	NA	False	NA	NA	NA	45084283	45105119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.30849.9	chr7	+	3551	16	NNC	ENSMUSG00000003865.17	novel	3678	16	NA	NA	6	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.4601987122902	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTCTTGTGGTGTGGTG	1066	False	NA	38	True	AATACA	-34	NA	45084306	45106056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45084595_45085955_45086138_45087525_45087617_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ES.3085.1	chr10	+	5546	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	-95	-4	-95	4	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTTGATTAGCACATCT	2121	False	NA	8	True	ATTAAA	-21	NA	71183497	71221719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.10	chr10	+	3816	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-3	-1733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	155.068801934281	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2213	False	NA	6	True	AATAAA	-20	NA	71183589	71219982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71209784_71209884_71212534_71212617_71217034
ES.3085.12	chr10	+	5633	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	153.211908443466	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCGTTGATTAGCACAT	2218	False	NA	6	True	ATTAAA	-19	NA	71183594	71221717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71209697_71209884_71212534_71212617_71217034
ES.3085.14	chr10	+	1391	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	-63	-5	10	5	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAAAGCTGCTCCTGT	2226	False	NA	NA	False	AATAAA	-19	NA	71183602	71213251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
ES.3085.16	chr10	+	3520	4	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	11	-1733	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	165.984604373083	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2227	False	NA	6	True	AATAAA	-20	NA	71183603	71219982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_71183921_71208537_71208711_71212534_71212617_71217034
ES.3085.17	chr10	+	5515	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	154.069969674676	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTCCGTTGATTAGCAC	2227	False	NA	4	True	ATTAAA	-17	NA	71183603	71221715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71200278_71200358_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.18	chr10	+	3656	6	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	11	-1773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.670040313788	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGTTTTATAATAA	2227	False	NA	-34	True	AATAAA	-11	NA	71183603	71219942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183925_71199290_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.19	chr10	+	5332	5	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	15	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	149.676943782267	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTTCCGTTGATTAG	2231	False	NA	1	True	ATTAAA	-14	NA	71183607	71221712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_71183921_71199279_71199366_71208537_71208711_71212534_71212617_71217034
ES.3085.2	chr10	+	3827	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	-60	1680	-60	-1680	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTTTTGAAAAATGTAT	2156	False	NA	59	True	CATAAA	-30	NA	71183532	71220035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.20	chr10	+	1186	6	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	20	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	134.662541190934	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAAGCTGCTCCTGTGT	2236	False	NA	NA	False	AATAAA	-21	NA	71183612	71213253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71212813
ES.3085.21	chr10	+	3597	5	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	21	-1732	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	149.676943782267	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2237	False	NA	7	True	AATAAA	-21	NA	71183613	71219983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_71183921_71199279_71199366_71208537_71208711_71212534_71212617_71217034
ES.3085.22	chr10	+	3775	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	21	-1730	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	154.069969674676	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGATGGAAGTTGCATAA	2237	False	NA	9	True	AATAAA	-23	NA	71183613	71219985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71200278_71200358_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.25	chr10	+	3858	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-31	-1733	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	153.211908443466	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGATGGAAGTTGCA	2258	False	NA	6	True	AATAAA	-20	NA	71183634	71219982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71209697_71209884_71212534_71212617_71217034
ES.3085.26	chr10	+	3991	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-21	-2478	-21	-1407	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTTGCAATCTTTTTA	2268	False	NA	NA	False	AATGAA	-13	NA	71183644	71220308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
ES.3085.28	chr10	+	3597	6	NNC	ENSMUSG00000060733.14	novel	1492	6	NA	NA	-21	-1767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.572539099294	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTTTATAATAAAGTATT	2268	False	NA	-28	True	AATAAA	-17	NA	71183644	71219948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183887_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
ES.3085.29	chr10	+	5292	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-20	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	128.308763881852	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTTCCGTTGATTAG	2269	False	NA	1	True	ATTAAA	-14	NA	71183645	71221712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034_71218553_71218651
ES.3085.31	chr10	+	1679	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	2	-358	2	358	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCCTGGAATGATTTAA	2291	False	NA	NA	False	ATTAAA	-32	NA	71183667	71213604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
ES.3085.33	chr10	+	5188	4	NIC	ENSMUSG00000060733.14	novel	1492	6	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	167.869658432434	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGTCTTCCGTTGATTA	2291	False	NA	0	True	ATTAAA	-13	NA	71183667	71221711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_71183921_71208534_71208711_71212534_71212617_71217034
ES.3085.34	chr10	+	3586	6	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	2	-1732	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	131.71089552501	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2291	False	NA	7	True	AATAAA	-21	NA	71183667	71219983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208657_71212534_71212617_71217034
ES.3085.35	chr10	+	3590	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	75	1782	2	-1782	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAATTGTAAAATAGTT	2291	False	NA	-43	True	AATAAA	-2	NA	71183667	71219933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.37	chr10	+	5346	6	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	136.512856537397	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAACGTCTTCCGTTGAT	2291	False	NA	-2	True	ATTAAA	-11	NA	71183667	71221709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183901_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.38	chr10	+	2695	7	NNC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-3	785	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	153.211908443466	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGCTTGCTTGCCCT	2293	False	NA	NA	False	ATTAAA	-14	NA	71183669	71218854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71209697_71209884_71212534_71212617_71217034
ES.3085.39	chr10	+	5188	6	NNC	ENSMUSG00000060733.14	novel	600	3	NA	NA	14171	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	137.28423070404	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTCCGTTGATTAGCAC	NA	False	NA	4	True	ATTAAA	-17	NA	71197843	71221715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71197913_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.40	chr10	+	3424	6	NNC	ENSMUSG00000060733.14	novel	600	3	NA	NA	14203	-1732	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	137.28423070404	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	NA	False	NA	7	True	AATAAA	-21	NA	71197875	71219983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_71197913_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ES.3085.41	chr10	+	4684	1	Genic_Genomic	ENSMUSG00000060733.14	novel	NA	NA	NA	NA	-546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCGTTGATTAGCACA	NA	False	NA	5	True	ATTAAA	-18	NA	71217032	71221716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_71217000_71221700
ES.3085.42	chr10	+	131	1	Intergenic	novelGene_2409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71236297	71236428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71236300_71236400
ES.3085.7	chr10	+	2599	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	-83	-1024	-10	785	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGCTTGCTTGCCCT	2206	False	NA	NA	False	ATTAAA	-14	NA	71183582	71218854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
ES.3085.8	chr10	+	5904	6	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	-10	21475	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	135.821353254928	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCGTTTCTTGTGG	2206	False	NA	NA	False	NA	NA	NA	71183582	71243190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71238062
ES.3085.9	chr10	+	4960	1	Genic_Genomic	ENSMUSG00000060733.14	novel	NA	NA	NA	NA	-9	-11167	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAACAGAAAACAAGCCTA	2207	False	NA	NA	False	NA	NA	NA	71183583	71188543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_71183600_71188500
ES.30850.1	chr7	-	2702	14	NNC	ENSMUSG00000003868.15	novel	725	9	NA	NA	2	7107	intron_retention	FALSE	canonical	0	0	junction_1	663.10709372731	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTTCCAGAGTCTT	-11	True	NA	NA	False	NA	NA	NA	45083699	45064076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45065516_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.12	chr7	-	4817	15	NIC	ENSMUSG00000003868.15	novel	2312	18	NA	NA	-17	0	intron_retention	FALSE	canonical	3	38	junction_14	646.233834124574	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9165	False	NA	-3	True	TATAAA	-16	NA	45084064	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084043
ES.30850.14	chr7	-	1416	15	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	257	junction_2	575.856221426062	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-12	True	NA	-3	True	TATAAA	-16	NA	45083700	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071559_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.15	chr7	-	2112	13	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-7	0	intron_retention	FALSE	canonical	1	3	junction_10	699.317579064683	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-20	True	NA	-3	True	TATAAA	-16	NA	45083708	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079165_45079389_45080743_45080799_45083675
ES.30850.18	chr7	-	1735	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	650.788473895399	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9508	False	NA	-3	True	TATAAA	-16	NA	45083721	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45081025_45083675
ES.30850.20	chr7	-	1641	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1951	junction_13	213.896037347351	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-20	True	NA	-3	True	TATAAA	-16	NA	45083708	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.22	chr7	-	5010	11	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	2260	junction_3	187.116541224981	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	2889	False	NA	-3	True	TATAAA	-16	NA	45080799	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45072232_45073502_45073622_45073706_45073802_45074105_45074469_45074567_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743
ES.30850.23	chr7	-	1803	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	639.129226657134	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9199	False	NA	-3	True	TATAAA	-16	NA	45084030	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071616_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.24	chr7	-	1463	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	654.570524411672	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9509	False	NA	-3	True	TATAAA	-16	NA	45083720	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073751_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.25	chr7	-	1574	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	1951	junction_13	213.920684300508	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-13	True	NA	-3	True	TATAAA	-16	NA	45083701	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.28	chr7	-	1581	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1951	junction_13	209.501917066259	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	-20	True	NA	-4	True	TATAAA	-15	NA	45083708	45071321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.29	chr7	-	2112	12	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	1951	junction_11	228.517066292163	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	-6	True	NA	-4	True	TATAAA	-15	NA	45083694	45071321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45072232_45073502_45073622_45073706_45073802_45074105_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079389_45080743_45080799_45083675
ES.30850.30	chr7	-	2111	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	27	0	intron_retention	FALSE	canonical	3	1951	junction_13	209.416602993811	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	9209	False	NA	-4	True	TATAAA	-15	NA	45084020	45071321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.32	chr7	-	3386	6	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-2814	-2	intron_retention	FALSE	canonical	3	2260	junction_4	195.913654450117	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTCTGCTGTGTCCTC	7172	False	NA	-6	True	TATAAA	-13	NA	45076516	45071323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45074469_45074567
ES.30850.33	chr7	-	4183	13	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	344	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	699.60214884366	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTCTGCTGTGTCCTC	9872	False	NA	-6	True	TATAAA	-13	NA	45083357	45071323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45072232_45073511_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743
ES.30850.34	chr7	-	1586	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	7	-2	intron_retention	FALSE	canonical	3	1951	junction_13	213.829385064728	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTCTGCTGTGTCCTC	-6	True	NA	-6	True	TATAAA	-13	NA	45083694	45071323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.35	chr7	-	1674	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1951	junction_13	184.744153809705	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTCTGCTGTGTCCTC	9518	False	NA	-6	True	TATAAA	-13	NA	45083711	45071323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.36	chr7	-	5028	13	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	1951	junction_12	219.084775575321	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGACCTCTGCTGTG	-19	True	NA	-11	True	TATAAA	-8	NA	45083707	45071328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45077970_45078076_45078207_45078877_45079389_45080743_45080799_45083675
ES.30850.37	chr7	-	1368	14	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-2	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	662.850791353253	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGACCTCTGCTGTG	-15	True	NA	-11	True	TATAAA	-8	NA	45083703	45071328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.39	chr7	-	1457	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	851.974803809673	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGACCTCTGCTGTG	-19	True	NA	-11	True	TATAAA	-8	NA	45083707	45071328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071826_45071939_45072111_45072232_45073502_45073617_45073713_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ES.30850.40	chr7	-	1473	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	649.042340054694	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAAACTGGACCTCTGC	-12	True	NA	-15	True	TATAAA	-4	NA	45083700	45071332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083678
ES.30850.41	chr7	-	2686	1	NIC	ENSMUSG00000003868.15	novel	2312	18	NA	NA	-3123	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	761	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTACTCAGGGCTTCCT	6863	False	NA	NA	False	NA	NA	NA	45076825	45074139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45074100_45076800
ES.30850.5	chr7	-	1693	16	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	-6	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	844.369024117352	776	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGGAAAGCCTTTATTG	-19	True	NA	-2	True	ACTAAA	-14	NA	45083707	45071277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45079861_45080017_45080743_45080799_45083675
ES.30850.6	chr7	-	2197	17	NNC	ENSMUSG00000003868.15	novel	2312	18	NA	NA	-1896	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	818.994350465099	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGGAAAGCCTTTATTG	3813	False	NA	-2	True	ACTAAA	-14	NA	45089416	45071277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304_45084762_45089287
ES.30850.8	chr7	-	4150	11	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	574	2	intron_retention	FALSE	canonical	1	2	junction_9	740.428531324935	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGTGTCCTCAGAGC	9076	False	NA	-1	True	TATAAA	-18	NA	45083127	45071318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45071631_45071808_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078877_45079389_45080743
ES.30850.9	chr7	-	2149	12	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	1951	junction_11	196.090930163947	776	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-9	True	NA	-3	True	TATAAA	-16	NA	45083697	45071320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45071430_45071515_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079389_45080743_45080799_45083675
ES.30851.1	chr7	-	1024	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	47	-103	2	103	multi-exon	TRUE	canonical	3	56898	junction_1	7359.57672393974	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTGTGTGGTAGTATC	NA	False	NA	84	True	NA	NA	NA	45109261	45107264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ES.30851.12	chr7	-	794	4	NNC	ENSMUSG00000050708.17	novel	710	4	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	30199.1782338527	4091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109261	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45107708_45107958_45108085_45108507_45108655_45109079
ES.30851.13	chr7	-	1472	2	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	69387	junction_1	0	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45108085_45108507
ES.30851.15	chr7	-	1344	3	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	56898	junction_1	8751.5	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109262	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45107708_45107958_45108655_45108953
ES.30851.17	chr7	-	915	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	1	0	intron_retention	FALSE	canonical	2	8	junction_2	31758.0183365818	4091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109262	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45107708_45107958_45108085_45108513_45108655_45108953
ES.30851.19	chr7	-	729	4	FSM	ENSMUSG00000050708.17	ENSMUST00000210375.2	710	4	-20	1	-20	-1	multi-exon	FALSE	canonical	3	11	junction_3	30194.0672355054	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTGTTTTTTCTATA	NA	False	NA	-21	True	AATAAA	-15	NA	45108865	45107369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108747
ES.30851.2	chr7	-	1013	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	-43	-2	-43	2	multi-exon	FALSE	canonical	3	56898	junction_1	7359.57672393974	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTTTCTATATATG	NA	False	NA	-17	True	AATAAA	-19	NA	45109351	45107365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ES.30851.20	chr7	-	869	5	NNC	ENSMUSG00000050708.17	novel	503	5	NA	NA	2	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	33220.0377407973	4091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGTTTTTTCTAT	NA	False	NA	-22	True	AATAAA	-14	NA	45109261	45107370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45107497_45107542_45107708_45107958_45108082_45108507_45108655_45108953
ES.30851.22	chr7	-	903	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	4	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	30199.1782338527	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCAGCTGGTGTTTT	NA	False	NA	-28	True	AATAAA	-8	NA	45109259	45107376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45107708_45107958_45108085_45108507_45108643_45108948
ES.30851.3	chr7	-	1896	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1642	-145	-1642	145	mono-exon	FALSE	NA	NA	NA	NA	NA	4091	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45107400_45109300
ES.30851.4	chr7	-	1171	3	NIC	ENSMUSG00000050708.17	novel	968	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	69387	junction_1	2507	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109261	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45108085_45108507_45108655_45108953
ES.30851.6	chr7	-	1644	2	FSM	ENSMUSG00000050708.17	ENSMUST00000211694.2	604	2	-1040	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	0	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45107708_45107958
ES.30851.7	chr7	-	1594	2	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	74401	junction_1	0	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109261	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45108655_45108953
ES.30851.8	chr7	-	924	4	NNC	ENSMUSG00000050708.17	novel	943	4	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_2	31761.6928844936	4091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45107708_45107958_45108093_45108513_45108655_45108953
ES.30852.1	chr7	+	2509	1	Antisense	novelGene_ENSMUSG00000109926.2_AS_novelGene_ENSMUSG00000003873.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAGAAGGAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	45115175	45117684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_45115200_45117700
ES.30852.2	chr7	+	1989	1	Antisense	novelGene_ENSMUSG00000109926.2_AS_novelGene_ENSMUSG00000003873.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTGGTGCTACATACT	NA	False	NA	NA	False	NA	NA	NA	45115177	45117166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_45115200_45117200
ES.30853.1	chr7	-	885	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	-17	-1	-17	1	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCCTTGTCCGCCCAG	9898	False	NA	-1	True	AATAAA	-23	NA	45116339	45111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ES.30853.11	chr7	-	2992	3	NIC	ENSMUSG00000003873.12	novel	1100	5	NA	NA	301	-5	intron_retention	FALSE	canonical	3	3187	junction_2	24	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10005	False	NA	-7	True	AATAAA	-17	NA	45115898	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45112928_45114612_45115548_45115643
ES.30853.12	chr7	-	2324	4	NIC	ENSMUSG00000003873.12	novel	1100	5	NA	NA	317	-5	intron_retention	FALSE	canonical	3	3184	junction_2	23.3666428910958	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	8495	False	NA	-7	True	AATAAA	-17	NA	45115882	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643
ES.30853.14	chr7	-	759	5	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1367.90357390424	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9985	False	NA	-7	True	AATAAA	-17	NA	45116252	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115567_45116165
ES.30853.15	chr7	-	813	6	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	17	-5	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	1263.97458835216	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9999	False	NA	-7	True	AATAAA	-17	NA	45116238	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115731_45116165
ES.30853.17	chr7	-	4364	3	ISM	ENSMUSG00000003873.12	ENSMUST00000210019.2	343	4	-35	-3551	18	-5	intron_retention	FALSE	canonical	3	3184	junction_1	1.5	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10000	False	NA	-7	True	AATAAA	-17	NA	45116237	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45114749_45115400_45115548_45115643
ES.30853.19	chr7	-	729	5	NNC	ENSMUSG00000003873.12	novel	801	6	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1577.4914421321	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	9951	False	NA	-7	True	AATAAA	-17	NA	45116286	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111387_45112863_45112928_45114612_45114749_45115400_45115548_45116165
ES.30853.2	chr7	-	1356	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	-85	-171	-18	1	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCCTTGTCCGCCCAG	9897	False	NA	-1	True	AATAAA	-23	NA	45116340	45111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
ES.30853.20	chr7	-	2928	4	NIC	ENSMUSG00000003873.12	novel	1100	5	NA	NA	22	-5	intron_retention	FALSE	canonical	3	3046	junction_1	65.7723346096214	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10004	False	NA	-7	True	AATAAA	-17	NA	45116233	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45111391_45112822_45114749_45115400_45115548_45115643
ES.30853.21	chr7	-	1006	6	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1266.77110797492	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10013	False	NA	-7	True	AATAAA	-17	NA	45116224	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45115923
ES.30853.24	chr7	-	707	2	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGTATGGTCCCTTGT	9964	False	NA	-9	True	AATAAA	-15	NA	45116273	45111127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111241_45115679
ES.30853.27	chr7	-	1874	4	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-38	-241	combination_of_known_splicesites	FALSE	canonical	3	105	junction_3	1463.62343365893	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGCTTACAGCCCTCCT	9877	False	NA	NA	False	NA	NA	NA	45116360	45111531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45112928_45114612_45114749_45115400_45115548_45116165
ES.30853.28	chr7	-	1651	4	NNC	ENSMUSG00000003873.12	novel	548	3	NA	NA	17	-241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1513.11606369843	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGCTTACAGCCCTCCT	9999	False	NA	NA	False	NA	NA	NA	45116238	45111531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45112928_45114612_45114749_45115400_45115478_45116196
ES.30853.29	chr7	-	884	5	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	-30	1383	-30	80	5prime_fragment	FALSE	canonical	3	2296	junction_4	392.831070563417	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTTGCTGTCTTCAGA	9947	False	NA	NA	False	AATATA	-31	NA	45116290	45112503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ES.30853.3	chr7	-	774	6	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	1260.37908583093	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCCTTGTCCGCCCAG	9980	False	NA	-1	True	AATAAA	-23	NA	45116257	45111119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115667_45116165
ES.30853.30	chr7	-	543	4	NIC	ENSMUSG00000003873.12	novel	801	6	NA	NA	16	-158	combination_of_known_splicesites	FALSE	canonical	3	105	junction_3	1463.62343365893	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTAAGTTATTTCTTT	9998	False	NA	NA	False	NA	NA	NA	45116239	45112741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45112928_45114612_45114749_45115400_45115548_45116165
ES.30853.31	chr7	-	539	4	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	-13	3396	-13	96	5prime_fragment	FALSE	canonical	3	2296	junction_3	419.316109874162	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGTCATTCCACAAATG	9964	False	NA	NA	False	AATAAA	-14	NA	45116273	45114516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45114749_45115400_45115548_45115643_45115696_45116165
ES.30853.4	chr7	-	798	5	NIC	ENSMUSG00000003873.12	novel	867	6	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	3	105	junction_4	1322.49735349452	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATGGTCCCTTGTCCG	9928	False	NA	-6	True	AATAAA	-18	NA	45116309	45111124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45116165
ES.30853.6	chr7	-	820	6	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1266.77110797492	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATGGTCCCTTGTCCG	9985	False	NA	-6	True	AATAAA	-18	NA	45116252	45111124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115723_45116165
ES.30853.7	chr7	-	743	6	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_5	1256.78360905925	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10008	False	NA	-7	True	AATAAA	-17	NA	45116229	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116191
ES.30853.9	chr7	-	693	5	NNC	ENSMUSG00000003873.12	novel	1100	5	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1367.90357390424	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTATGGTCCCTTGTCC	10008	False	NA	-7	True	AATAAA	-17	NA	45116229	45111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45116189
ES.30854.1	chr7	+	219	1	Intergenic	novelGene_25403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATGTATTATTGCAAT	NA	False	NA	NA	False	NA	NA	NA	45119146	45119365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45119100_45119400
ES.30855.1	chr7	+	175	1	Intergenic	novelGene_25404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACACAAG	NA	False	NA	NA	False	NA	NA	NA	45119519	45119694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45119500_45119700
ES.30856.1	chr7	-	1770	1	ISM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	16043	6	7169	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACACCTTCCAATTC	6602	False	NA	-15	True	NA	NA	NA	45122186	45120416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45120400_45122200
ES.30857.1	chr7	+	218	1	Antisense	novelGene_ENSMUSG00000011382.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCGGCCTCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45122610	45122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_45122600_45122800
ES.30858.1	chr7	+	172	1	Intergenic	novelGene_25406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	2674	False	NA	NA	False	NA	NA	NA	45127284	45127456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45127300_45127500
ES.30859.1	chr7	+	279	1	Intergenic	novelGene_25407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTTTTGTTTTGTTTT	920	False	NA	NA	False	NA	NA	NA	45129964	45130243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45130000_45130200
ES.3086.1	chr10	-	4369	2	Antisense	novelGene_ENSMUSG00000060733.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71204535	71197693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_71199364_71201836
ES.30860.1	chr7	+	2057	12	NNC	ENSMUSG00000023467.19	novel	2153	11	NA	NA	-38	-1	intron_retention	FALSE	canonical	0	0	junction_1	29.821784704729	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTAGTTAGTGTAC	6705	False	NA	NA	False	NA	NA	NA	45135749	45172017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45135908_45164078_45164131_45164841_45165001_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.10	chr7	+	1386	8	ISM	ENSMUSG00000023467.19	ENSMUST00000085331.14	1525	10	1842	4	636	-2	3prime_fragment	FALSE	canonical	3	20	junction_3	22.1423963085686	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTCTGTTCTGTGCGTT	1920	False	NA	13	True	AATAAA	-14	NA	45165867	45171802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.11	chr7	+	4398	4	NNC	ENSMUSG00000023467.19	novel	1675	10	NA	NA	668	0	intron_retention	FALSE	non_canonical	0	0	junction_2	32.7448045073142	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	1952	False	NA	15	True	AATAAA	-16	NA	45165899	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45166111_45167203_45169660_45169866_45171440_45171646
ES.30860.12	chr7	+	1015	7	NIC	ENSMUSG00000023467.19	novel	1675	10	NA	NA	709	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	27.8532862613293	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	1993	False	NA	15	True	AATAAA	-16	NA	45165940	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45166111_45167203_45167392_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.13	chr7	+	2295	8	ISM	ENSMUSG00000023467.19	ENSMUST00000210868.2	1664	11	1880	272	709	-272	internal_fragment	FALSE	canonical	3	20	junction_3	22.1423963085686	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTTGGTATTTGAA	1993	False	NA	NA	False	AATAAA	-19	NA	45165940	45172784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.14	chr7	+	976	6	ISM	ENSMUSG00000023467.19	ENSMUST00000210868.2	1664	11	4915	0	3744	0	3prime_fragment	FALSE	canonical	3	4	junction_5	28.0756121927911	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAAAGGCAGT	5028	False	NA	NA	False	AATAAA	-10	NA	45168975	45173056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646_45171773_45172884
ES.30860.15	chr7	+	926	6	NNC	ENSMUSG00000023467.19	novel	2153	11	NA	NA	3762	0	intron_retention	FALSE	canonical	1	1	junction_1	29.2643127375307	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAGTTAGTGTACA	5046	False	NA	NA	False	NA	NA	NA	45168993	45172018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45169075_45169180_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.16	chr7	+	718	4	NIC	ENSMUSG00000023467.19	novel	2153	11	NA	NA	3772	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.249906785864	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAGTTAGTGTACAA	5056	False	NA	NA	False	NA	NA	NA	45169003	45172019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45169268_45171267_45171440_45171646_45171773_45171863
ES.30860.2	chr7	+	180	1	Intergenic	novelGene_25408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAAATGACCACAGGA	9546	False	NA	NA	False	AATAAA	-29	NA	45138590	45138770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45138600_45138800
ES.30860.3	chr7	+	1730	12	NIC	ENSMUSG00000023467.19	novel	1749	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.3085607892505	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	7258	False	NA	15	True	AATAAA	-16	NA	45163126	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45163212_45164078_45164131_45164841_45164981_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.4	chr7	+	1996	11	ISM	ENSMUSG00000023467.19	ENSMUST00000024233.15	1749	13	580	7	-277	0	3prime_fragment	FALSE	canonical	2	3	junction_1	28.0230262462854	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	7859	False	NA	15	True	AATAAA	-16	NA	45163727	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45164131_45164841_45164981_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.5	chr7	+	3271	7	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	-23	0	intron_retention	FALSE	canonical	2	5	junction_1	26.9051833089628	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	1261	False	NA	15	True	AATAAA	-16	NA	45165208	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45165424_45165662_45166111_45167203_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.6	chr7	+	1643	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.8246699929915	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTCTGTTCTGTGCGTT	1285	False	NA	13	True	AATAAA	-14	NA	45165232	45171802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.7	chr7	+	1663	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.1807581778189	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	1288	False	NA	15	True	AATAAA	-16	NA	45165235	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30860.8	chr7	+	1804	11	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	27.8655701538655	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGCAGTGTGG	1291	False	NA	NA	False	AATAAA	-14	NA	45165238	45173060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45165424_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168331_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646_45171773_45172884
ES.30860.9	chr7	+	1505	10	NNC	ENSMUSG00000023467.19	novel	259	2	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	24.8034246938444	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTCTGTGCGTTTG	1380	False	NA	15	True	AATAAA	-16	NA	45165327	45171804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45165379_45165662_45165801_45165939_45166111_45167203_45167392_45168009_45168310_45169154_45169268_45170163_45170279_45170366_45170466_45171267_45171440_45171646
ES.30861.1	chr7	+	3292	19	NNC	ENSMUSG00000040428.20	novel	2660	20	NA	NA	21	0	intron_retention	TRUE	canonical	0	0	junction_1	4.73918521933991	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	177	False	NA	8	True	AATAAA	-17	NA	45175774	45203653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45175866_45178478_45178565_45179992_45180083_45181681_45181790_45183761_45183835_45183930_45184032_45184167_45184278_45187080_45187297_45187621_45187902_45188629_45188714_45189903_45189952_45190254_45190336_45190478_45190629_45193369_45193469_45197373_45197515_45198483_45199390_45202668_45202719_45202992_45203106_45203188
ES.30861.2	chr7	+	830	4	NIC	ENSMUSG00000040428.20	novel	2655	18	NA	NA	-765	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.28653526310404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	False	NA	8	True	AATAAA	-17	NA	45198493	45203653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45198584_45199227_45199390_45202992_45203106_45203188
ES.30861.3	chr7	+	580	2	FSM	ENSMUSG00000040428.20	ENSMUST00000211348.2	476	2	-40	-64	14	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTGTGACATTGTG	NA	False	NA	6	True	AATAAA	-15	NA	45199272	45203651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45199390_45203188
ES.30862.1	chr7	+	1462	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	-56	-6	-56	6	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTCGTGTCCTCTTTTC	NA	False	NA	16	True	NA	NA	NA	45204260	45216751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.10	chr7	+	1225	3	NIC	ENSMUSG00000030825.20	novel	1315	9	NA	NA	-24	0	intron_retention	FALSE	canonical	2	29	junction_1	294	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45208605	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45208897_45215378_45215641_45216070
ES.30862.11	chr7	+	1057	6	NNC	ENSMUSG00000030825.20	novel	427	3	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.349311925595	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	False	NA	3	True	NA	NA	NA	45208605	45216738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45208633_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.12	chr7	+	1234	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3139	-2	-23	-1	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGAGTGGTCGTGTCC	NA	False	NA	9	True	NA	NA	NA	45208606	45216744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.13	chr7	+	1098	4	NIC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	15	6	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	264.181755615334	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTCGTGTCCTCTTTTC	NA	False	NA	16	True	NA	NA	NA	45208644	45216751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45208897_45215378_45215447_45215543_45215641_45216070
ES.30862.14	chr7	+	1170	5	NNC	ENSMUSG00000030825.20	novel	1315	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	251.516773794513	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45208657	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45208897_45212338_45212444_45215378_45215447_45215554_45215641_45216070
ES.30862.15	chr7	+	855	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3337	179	175	-179	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTGTTCGCCCTTGG	NA	False	NA	5	True	NA	NA	NA	45208804	45216563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.16	chr7	+	1930	5	NNC	ENSMUSG00000030825.20	novel	410	5	NA	NA	-215	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	255.351106322256	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45211304	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45212108_45212153_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.2	chr7	+	797	6	NNC	ENSMUSG00000030825.20	novel	797	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	70.1700790935852	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45204353	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45216363
ES.30862.3	chr7	+	946	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	39	415	-5	219	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGCTCTATCACTG	NA	False	NA	NA	False	NA	NA	NA	45204355	45216330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.4	chr7	+	2540	7	NIC	ENSMUSG00000030825.20	novel	1315	9	NA	NA	20	0	intron_retention	FALSE	canonical	3	159	junction_1	196.218981979035	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45204380	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.5	chr7	+	1398	8	NIC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	52	0	intron_retention	FALSE	canonical	3	159	junction_3	207.531654826684	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45204412	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215641_45216070
ES.30862.6	chr7	+	1520	9	NNC	ENSMUSG00000030825.20	novel	1315	9	NA	NA	338	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.090660856003	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGAGTGGTCGTGTCC	NA	False	NA	9	True	NA	NA	NA	45204698	45216744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45204994_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.7	chr7	+	224	1	Intergenic	novelGene_25414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	45204851	45205075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45204900_45205100
ES.30862.8	chr7	+	1276	6	NNC	ENSMUSG00000030825.20	novel	427	3	NA	NA	-1263	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	233.552221141226	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45207366	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45207609_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30862.9	chr7	+	1509	7	NNC	ENSMUSG00000030825.20	novel	427	3	NA	NA	-954	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	275.783379162382	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTGGAGTGGTCGTGT	NA	False	NA	7	True	NA	NA	NA	45207675	45216742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45207869_45207909_45208192_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ES.30863.1	chr7	-	3148	8	NNC	ENSMUSG00000011382.9	novel	5323	7	NA	NA	-2	-1967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.9095228575236	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGTCTTTAATCCCAG	NA	False	NA	1	True	NA	NA	NA	45138231	45122377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45122630_45122839_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
ES.30863.2	chr7	-	2886	7	NNC	ENSMUSG00000011382.9	novel	5323	7	NA	NA	5	-1969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.542057635833	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGTCTTTAATCCC	NA	False	NA	-1	True	NA	NA	NA	45138224	45122379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45122630_45122839_45124800_45125028_45125177_45128432_45128558_45136164_45136329_45137483_45137596_45138097
ES.30863.3	chr7	-	1121	7	FSM	ENSMUSG00000011382.9	ENSMUST00000011526.7	5323	7	4	4198	4	445	multi-exon	FALSE	canonical	2	18	junction_4	6.73300329224139	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTGTTGTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	45138225	45124608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
ES.30863.4	chr7	-	181	1	Intergenic	novelGene_25405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAATGTAATGAAAGA	2732	False	NA	NA	False	NA	NA	NA	45126056	45125875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45125900_45126100
ES.30863.5	chr7	-	2555	3	NNC	ENSMUSG00000011382.9	novel	5323	7	NA	NA	26	588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCTTTCTCAGAAGATA	NA	False	NA	NA	False	NA	NA	NA	45138203	45134313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45134650_45135484_45137596_45138095
ES.30864.1	chr7	-	3933	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	42	878	-5	-878	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCTGCATTAAGCCT	NA	False	NA	NA	False	NA	NA	NA	45159788	45140759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.11	chr7	-	2320	12	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-1	224	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	148.074473109908	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGGTCTGTGGCTCAG	NA	False	NA	-18	True	ATTAAA	-11	NA	45159831	45142307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45159129_45159272_45159746
ES.30864.12	chr7	-	2237	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	-29	2645	-29	5	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTCTTCCAAGCCCT	NA	False	NA	1	True	AATAAA	-24	NA	45159859	45142526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.13	chr7	-	2170	13	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	175	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_12	145.559266280096	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159564	45142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159513
ES.30864.14	chr7	-	2222	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-1641	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	146.896481880571	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45161471	45142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45161368
ES.30864.16	chr7	-	2180	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	147.487546555256	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159801	45142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151000_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.18	chr7	-	2202	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-7550	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	147.164024136336	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45167380	45142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45167297
ES.30864.19	chr7	-	2218	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	147.970436236432	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159831	45142531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148134_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.20	chr7	-	2204	13	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_12	145.559266280096	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATCCTGCCCTCTTCCA	NA	False	NA	-5	True	AATAAA	-18	NA	45159741	45142532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159655
ES.30864.22	chr7	-	2074	12	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	153.602416905916	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCCTGCCCTCTTCC	NA	False	NA	-6	True	AATAAA	-17	NA	45159800	45142533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.23	chr7	-	2195	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	148.410537024835	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCCTGCCCTCTTCC	NA	False	NA	-6	True	AATAAA	-17	NA	45159830	45142533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144733_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.24	chr7	-	3329	6	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	12817	2652	1249	-2	3prime_fragment	FALSE	canonical	3	497	junction_1	16.7020956768904	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCCTGCCCTCTTCC	7532	False	NA	-6	True	AATAAA	-17	NA	45147013	45142533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978
ES.30864.25	chr7	-	2071	12	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-1	-25	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	148.074473109908	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACATTAGTGTATCT	NA	False	NA	-29	True	AATATA	-10	NA	45159831	45142556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45159129_45159272_45159746
ES.30864.26	chr7	-	2843	12	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-176	-25	intron_retention	FALSE	canonical	2	2	junction_7	153.12464538667	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACATTAGTGTATCT	NA	False	NA	-29	True	AATATA	-10	NA	45160006	45142556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148134_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
ES.30864.27	chr7	-	1840	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	20	2993	-1	-343	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCCTTCTGTGGAG	NA	False	NA	NA	False	NA	NA	NA	45159810	45142874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.28	chr7	-	681	4	ISM	ENSMUSG00000030824.18	ENSMUST00000033096.16	2111	13	-60	8241	-1	244	5prime_fragment	FALSE	canonical	3	546	junction_3	23.5088635766739	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATTCTCTCTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	45159810	45150772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.29	chr7	-	266	1	Intergenic	novelGene_25409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGGAAGGAAGGGTAC	NA	False	NA	NA	False	NA	NA	NA	45155083	45154817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45154800_45155100
ES.30864.3	chr7	-	2439	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	-4	2418	-4	232	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGCTCAGTTGGCATA	NA	False	NA	-10	True	ATTAAA	-19	NA	45159834	45142299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.30	chr7	-	180	1	Intergenic	novelGene_25410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	45160795	45160615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45160600_45160800
ES.30864.4	chr7	-	2474	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-1661	232	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	146.896481880571	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGCTCAGTTGGCATA	NA	False	NA	-10	True	ATTAAA	-19	NA	45161491	45142299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45161368
ES.30864.5	chr7	-	5486	11	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-14	229	intron_retention	FALSE	canonical	2	2	junction_5	161.000652172592	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGGCTCAGTTGGC	NA	False	NA	-13	True	ATTAAA	-16	NA	45159844	45142302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45147915_45148134_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30864.7	chr7	-	2417	13	NNC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	0	227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.01209925807	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTCTGTGGCTCAGTTG	NA	False	NA	-15	True	ATTAAA	-14	NA	45159809	45142304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151000_45151140_45152601_45152710_45159129_45159274_45159746
ES.30864.8	chr7	-	2673	12	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	-3	227	intron_retention	FALSE	canonical	3	464	junction_6	39.1671560839242	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTCTGTGGCTCAGTTG	NA	False	NA	-15	True	ATTAAA	-14	NA	45159833	45142304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ES.30865.1	chr7	-	158	1	Intergenic	novelGene_25411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAGAAAAA	9691	False	NA	NA	False	NA	NA	NA	45169862	45169704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45169700_45169900
ES.30866.1	chr7	-	3307	1	Genic_Genomic	ENSMUSG00000040435.13	novel	NA	NA	NA	NA	46	0	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACGTGTGTTCTTTATT	3907	False	NA	45	True	AATAAA	-25	NA	45175646	45172339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_45172300_45175600
ES.30866.2	chr7	-	2488	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	-155	0	-155	0	multi-exon	FALSE	canonical	3	356	junction_2	34	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3706	False	NA	44	True	AATAAA	-24	NA	45175847	45172340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45172747_45173162_45174816_45175418
ES.30866.3	chr7	-	2700	2	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	46	2	intron_retention	FALSE	canonical	3	356	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTACGTGTGTTCTT	3907	False	NA	41	True	AATAAA	-21	NA	45175646	45172343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45174816_45175418
ES.30867.1	chr7	-	221	1	Intergenic	novelGene_25412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTTTTTGTCTTTTTT	2497	False	NA	NA	False	NA	NA	NA	45177056	45176835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45176800_45177100
ES.30868.1	chr7	-	182	1	Intergenic	novelGene_25413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGGAAGAAGA	9595	False	NA	NA	False	NA	NA	NA	45194891	45194709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45194700_45194900
ES.30869.1	chr7	-	720	2	NNC	ENSMUSG00000110144.2	novel	530	2	NA	NA	-7890	147	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTCCTTGCCTAATCC	3200	False	NA	NA	False	NA	NA	NA	45208929	45199810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45200412_45208810
ES.3087.1	chr10	+	551	1	Intergenic	novelGene_2410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	40	True	AATAAA	-21	NA	71543138	71543689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_71543100_71543700
ES.30870.1	chr7	+	2045	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	-275	2	-275	-1	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGCTATCATGCTCTA	1980	False	NA	NA	False	AATAAA	-16	NA	45219301	45239133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ES.30870.10	chr7	+	3051	3	NNC	ENSMUSG00000030826.20	novel	917	5	NA	NA	-431	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	257.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	8734	False	NA	NA	False	AATAAA	-6	NA	45234413	45239123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45235795_45236676_45237953_45238729
ES.30870.3	chr7	+	2971	10	NNC	ENSMUSG00000030826.20	novel	1772	11	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	137.890008053476	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	2451	False	NA	NA	False	AATAAA	-6	NA	45219772	45239123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235795_45236676_45237216_45237358_45237804_45237877_45237953_45238729
ES.30870.4	chr7	+	3549	11	NNC	ENSMUSG00000030826.20	novel	1772	11	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	130.842500740394	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	2451	False	NA	NA	False	AATAAA	-6	NA	45219772	45239123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45236200_45236285_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ES.30870.5	chr7	+	3252	9	NNC	ENSMUSG00000030826.20	novel	1772	11	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	144.201898392497	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2474	False	NA	NA	False	AATAAA	-17	NA	45219795	45239134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45219824_45224854_45225427_45234340_45234452_45234534_45234655_45234837_45235795_45236676_45237216_45237358_45237804_45237877_45237953_45238729
ES.30870.6	chr7	+	6393	10	ISM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	407	3	187	2	3prime_fragment	FALSE	canonical	3	349	junction_3	48.9325562558139	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGGCTATCATGCTCT	2662	False	NA	NA	False	AATAAA	-15	NA	45219983	45239132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ES.30870.7	chr7	+	1687	11	NNC	ENSMUSG00000030826.20	novel	917	5	NA	NA	-489	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	130.408742038254	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	3538	False	NA	NA	False	AATAAA	-6	NA	45224034	45239123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45224209_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ES.30870.8	chr7	+	179	1	Intergenic	novelGene_25415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAAGGCACT	1763	False	NA	NA	False	NA	NA	NA	45227442	45227621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45227400_45227600
ES.30870.9	chr7	+	4245	9	Fusion	ENSMUSG00000030826.20_ENSMUSG00000109632.2	novel	1772	11	NA	NA	-476	2991	multi-exon	FALSE	canonical	0	0	junction_7	166.374530427587	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGGTTAATTGTTTTA	8689	False	NA	NA	False	NA	NA	NA	45234368	45251984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45246877_45247103_45248776
ES.30871.1	chr7	-	967	1	NIC	ENSMUSG00000109644.2	novel	897	4	NA	NA	563	464	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAACAACAACAAGCAA	9735	False	NA	NA	False	NA	NA	NA	45223999	45223032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45223000_45224000
ES.30872.1	chr7	+	305	1	Intergenic	novelGene_25416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	45261186	45261491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45261200_45261500
ES.30873.1	chr7	+	3695	4	NNC	ENSMUSG00000008461.7	novel	354	3	NA	NA	-1686	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGTTTTTGGAGCTG	NA	False	NA	NA	False	ATTAAA	-23	NA	45265026	45270492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45265979_45266758_45266919_45267035_45267172_45268045
ES.30873.2	chr7	+	4211	3	NNC	ENSMUSG00000008461.7	novel	2580	2	NA	NA	-762	13	intron_retention	FALSE	non_canonical	0	0	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTTGGAGCTGTGTA	NA	False	NA	NA	False	ATTAAA	-27	NA	45265950	45270496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45267284_45267487_45269359_45269489
ES.30874.1	chr7	+	1509	11	NNC	ENSMUSG00000064158.7	novel	1493	10	NA	NA	-23	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4.05092582010582	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGGGACTGGTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	45271211	45276652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45271425_45272145_45272456_45272717_45272793_45273558_45273646_45274085_45274107_45274352_45274434_45274545_45274620_45274965_45275120_45275246_45275281_45275446_45275706_45276451
ES.30874.10	chr7	+	1112	5	NIC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	5144	-1826	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	28.3052556957184	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTAGCTCACATTTG	4510	False	NA	NA	False	NA	NA	NA	45282055	45286691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45286143
ES.30874.11	chr7	+	4336	6	NIC	ENSMUSG00000042918.18	novel	2486	9	NA	NA	67	-157	intron_retention	FALSE	canonical	2	4	junction_1	3.77359245282264	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCAGTTCTCATGTCT	6996	False	NA	NA	False	NA	NA	NA	45289483	45295008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45291889_45292171_45292749_45292920_45293116_45293627_45293853_45293942_45293998_45294129
ES.30874.12	chr7	+	2153	6	NNC	ENSMUSG00000042918.18	novel	2486	9	NA	NA	-14	1	intron_retention	FALSE	canonical	1	1	junction_2	2.13541565040626	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCCCGAGGCTCATGA	8698	False	NA	NA	False	ATTAAA	-14	NA	45291185	45295166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45291241_45291748_45291889_45292423_45292749_45292920_45293116_45293627_45293842_45293942
ES.30874.13	chr7	+	1909	5	NIC	ENSMUSG00000003273.15	novel	1585	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	16	junction_2	4.14578098794425	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350421	45354033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45350791_45351857_45352044_45352256_45352559_45352882_45353038_45353136
ES.30874.14	chr7	+	1158	7	ISM	ENSMUSG00000003273.15	ENSMUST00000003360.10	1585	9	1163	73	-10	0	3prime_fragment	FALSE	canonical	3	16	junction_2	3.86221007541882	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350429	45354033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45350791_45351857_45352044_45352256_45352353_45352485_45352559_45352882_45353038_45353136_45353303_45353912
ES.30874.15	chr7	+	2307	2	ISM	ENSMUSG00000003273.15	ENSMUST00000211259.2	706	5	201	-1132	-7	0	intron_retention	FALSE	canonical	3	24	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350659	45354033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45350791_45351857
ES.30874.16	chr7	+	1454	4	NNC	ENSMUSG00000003273.15	novel	706	5	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_3	7.31816613336672	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350674	45354033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45350791_45351952_45352044_45352256_45352353_45352882
ES.30874.17	chr7	+	5878	6	Fusion	ENSMUSG00000003273.15_ENSMUSG00000059824.13	novel	1585	9	NA	NA	12	0	intron_retention	FALSE	canonical	3	16	junction_2	16.9115345252878	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTTCCCCCACCTCC	NA	False	NA	NA	False	AATACA	-20	NA	45350678	45359452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_45350791_45351857_45352044_45352256_45352559_45352882_45353038_45353136_45357896_45359088
ES.30874.18	chr7	+	1812	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	-24	49	-24	40	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTGTTGTGGCGGAC	NA	False	NA	NA	False	AATAAA	-16	NA	45354487	45359578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ES.30874.19	chr7	+	1264	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-199	91	-18	-5	multi-exon	FALSE	canonical	3	23	junction_1	20	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTAGCCTTCCCCCA	NA	False	NA	NA	False	AATACA	-15	NA	45354493	45359447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45355187_45357683_45357896_45359088
ES.30874.2	chr7	+	6225	17	Fusion	ENSMUSG00000044562.13_ENSMUSG00000064158.7	novel	3202	12	NA	NA	-21	3	intron_retention	FALSE	canonical	0	0	junction_7	32.6064961894099	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCAAGATTTGGGGGC	NA	False	NA	9	True	AATAAA	-22	NA	45271213	45288520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_45271425_45272145_45272456_45272717_45272793_45273558_45274107_45274352_45274434_45274545_45275706_45276451_45277331_45277837_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108
ES.30874.20	chr7	+	1669	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	-15	183	-15	-8	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGCTAGCCTTCCC	NA	False	NA	NA	False	AATACA	-12	NA	45354496	45359444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ES.30874.21	chr7	+	1382	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	-186	-40	-5	40	multi-exon	FALSE	canonical	3	23	junction_1	20	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTGTTGTGGCGGAC	NA	False	NA	NA	False	AATAAA	-16	NA	45354506	45359578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45355187_45357683_45357896_45359088
ES.30874.22	chr7	+	1146	3	NNC	ENSMUSG00000059824.13	novel	1156	3	NA	NA	-29	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCAGCTACTGGCTCT	NA	False	NA	NA	False	AATAAA	-34	NA	45354663	45359596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45355187_45357780_45357896_45359088
ES.30874.23	chr7	+	3350	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-2670	-1	-56	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTTCATTCATGAAG	3252	False	NA	17	True	AATAAA	-24	NA	45364824	45370260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ES.30874.24	chr7	+	1675	2	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-29	6	-29	1	intron_retention	FALSE	canonical	3	6098	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCCTCTGTGTTCATT	5893	False	NA	10	True	AATAAA	-17	NA	45367465	45370253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45367564_45368676
ES.30874.25	chr7	+	2313	3	FSM	ENSMUSG00000059070.17	ENSMUST00000211325.2	502	3	-1108	-703	-27	0	multi-exon	FALSE	canonical	3	8095	junction_2	104.5	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5895	False	NA	9	True	AATAAA	-16	NA	45367467	45370252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45368764_45368952_45369061_45369343
ES.30874.26	chr7	+	1448	3	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	7	8	7	0	intron_retention	FALSE	canonical	3	6098	junction_1	1103	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGTCCTCTGTGTTCA	5929	False	NA	8	True	AATAAA	-15	NA	45367501	45370251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45367564_45368676_45368764_45368952
ES.30874.28	chr7	+	645	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3103.20137922114	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5955	False	NA	11	True	AATAAA	-18	NA	45367527	45370254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369447_45369717_45369912_45370137
ES.30874.29	chr7	+	631	6	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	5	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	3294.36625771938	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTCTGTGTTC	5955	False	NA	7	True	AATAAA	-14	NA	45367527	45370250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369906_45370137
ES.30874.3	chr7	+	4316	4	NIC	ENSMUSG00000064158.7	novel	1493	10	NA	NA	-20	-16	intron_retention	FALSE	canonical	1	4	junction_3	4.78423336480244	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTGGGGACTGGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	45271214	45276650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45272456_45272717_45274434_45274545_45275706_45276451
ES.30874.30	chr7	+	672	7	NNC	ENSMUSG00000059070.17	novel	2989	7	NA	NA	6	22778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3043.96656884109	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGAAAGTTTGTAGT	5956	False	NA	NA	False	NA	NA	NA	45367528	45393038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137_45370254_45393005
ES.30874.31	chr7	+	2025	4	NIC	ENSMUSG00000059070.17	novel	1027	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	7563	junction_3	311.94479568596	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5959	False	NA	11	True	AATAAA	-18	NA	45367531	45370254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45368764_45368952_45369061_45369343_45369912_45370137
ES.30874.32	chr7	+	1070	6	FSM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	-41	-2	4	0	multi-exon	FALSE	canonical	3	220	junction_1	3241.25016621673	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5967	False	NA	11	True	AATAAA	-18	NA	45367539	45370254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45368005_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ES.30874.33	chr7	+	2714	1	NIC	ENSMUSG00000059070.17	novel	2989	7	NA	NA	5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	861	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5968	False	NA	11	True	AATAAA	-18	NA	45367540	45370254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45367500_45370300
ES.30874.34	chr7	+	832	6	NNC	ENSMUSG00000059070.17	novel	1027	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	3321.2486447118	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	5992	False	NA	11	True	AATAAA	-18	NA	45367564	45370254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45367792_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ES.30874.35	chr7	+	1646	4	FSM	ENSMUSG00000059070.17	ENSMUST00000211425.2	834	4	-770	-42	335	0	multi-exon	FALSE	canonical	3	7563	junction_3	587.15263962808	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGTCCTCTGTGTTCA	6343	False	NA	8	True	AATAAA	-15	NA	45367915	45370251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45368764_45368952_45369443_45369717_45369912_45370137
ES.30874.36	chr7	+	1517	2	ISM	ENSMUSG00000059070.17	ENSMUST00000209867.2	254	3	-568	0	-124	0	intron_retention	FALSE	canonical	3	8095	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGTCCTCTGTGTTCA	6879	False	NA	8	True	AATAAA	-15	NA	45368451	45370251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45369061_45369343
ES.30874.37	chr7	+	1775	5	FSM	ENSMUSG00000054161.13	ENSMUST00000129507.5	2908	5	1128	5	1120	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACACGCGTCTCCATGG	NA	False	NA	NA	False	ATTAAA	-11	NA	45371763	45378911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45372079_45372864_45373033_45373277_45373403_45376055_45376501_45378189
ES.30874.4	chr7	+	4345	3	NIC	ENSMUSG00000064158.7	novel	2330	7	NA	NA	2	-12	intron_retention	FALSE	canonical	2	4	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGACTGGTTCTGAC	NA	False	NA	NA	False	AATAAA	-19	NA	45271236	45276654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45275120_45275446_45275706_45276451
ES.30874.5	chr7	+	3334	9	NIC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	1555	-1	intron_retention	FALSE	canonical	3	17	junction_1	25.7023223658875	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTTGTCAAGATTTGG	921	False	NA	5	True	AATAAA	-18	NA	45278466	45288516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45278506_45279563_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45286006_45286143_45286317_45287293_45287442_45288108
ES.30874.6	chr7	+	2233	11	NNC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	2795	104521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.6905348645301	999	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGAAAGTTTGTAGT	2161	False	NA	NA	False	NA	NA	NA	45279706	45393038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45279920_45281659_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45287293_45287442_45288108_45288516_45311548_45311601_45393002
ES.30874.7	chr7	+	1543	7	NIC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	4893	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	24.4500624857188	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACTTGTCAAGATTTG	4259	False	NA	4	True	AATAAA	-17	NA	45281804	45288515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45286143_45286317_45287293_45287442_45288108
ES.30874.8	chr7	+	1469	7	NIC	ENSMUSG00000044562.13	novel	3202	12	NA	NA	5065	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.7960661087258	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGTCAAGATTTGGG	4431	False	NA	6	True	AATAAA	-19	NA	45281976	45288517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143_45286317_45288108
ES.30874.9	chr7	+	1445	6	ISM	ENSMUSG00000044562.13	ENSMUST00000057927.10	3202	12	5066	1815	5066	-1815	internal_fragment	FALSE	canonical	3	61	junction_1	13.311649033835	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATTTGTTTGTTTGTTT	4432	False	NA	NA	False	NA	NA	NA	45281977	45286702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45282314_45284240_45284279_45284390_45284543_45284639_45284756_45285761_45286006_45286143
ES.30875.1	chr7	+	1017	3	NNC	ENSMUSG00000109602.2	novel	515	3	NA	NA	5746	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTTTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	45397218	45399681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45397771_45398802_45398908_45399321
ES.30876.1	chr7	+	184	1	Intergenic	novelGene_25417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTACTTAGGAGGTTG	NA	False	NA	NA	False	NA	NA	NA	45403898	45404082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45403900_45404100
ES.30877.1	chr7	-	3522	3	NNC	ENSMUSG00000110357.2	novel	1542	2	NA	NA	-5639	1650	intron_retention	FALSE	canonical	0	0	junction_2	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTCTGTGTAGCCCT	4383	False	NA	NA	False	AAAACA	-45	NA	45293828	45283453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45286563_45288106_45288304_45293612
ES.30878.1	chr7	-	3007	2	FSM	ENSMUSG00000055978.6	ENSMUST00000069800.6	2955	2	-52	0	-52	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGGTTTTTGTTTGCT	9463	False	NA	NA	False	AATAAA	-21	NA	45315870	45298014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45300773_45315621
ES.30878.2	chr7	-	3158	4	NNC	ENSMUSG00000055978.6	novel	606	3	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATTTCATGGTTTTTG	9603	False	NA	NA	False	AATAAA	-15	NA	45315730	45298020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45300773_45304916_45305124_45315158_45315249_45315621
ES.30879.1	chr7	-	3134	6	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.79165942028438	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	AATAAA	-21	NA	45343782	45327109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45328949_45333603_45333716_45334118_45334170_45334689_45335292_45337492_45337638_45343397
ES.30879.2	chr7	-	2979	3	ISM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	8109	0	8109	0	3prime_fragment	TRUE	canonical	3	9	junction_2	2	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	5046	False	NA	NA	False	AATAAA	-21	NA	45335717	45327109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45328949_45333603_45333716_45334689
ES.30879.3	chr7	-	2348	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	29	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTACCCAGCAATTG	NA	False	NA	NA	False	AATAAA	-18	NA	45343797	45327112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45328949_45333603_45333716_45343397
ES.30879.4	chr7	-	1931	1	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	14783	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTACCCAGCAATTG	7511	False	NA	NA	False	AATAAA	-18	NA	45329043	45327112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45327100_45329000
ES.30879.5	chr7	-	2769	6	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.17687164221791	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343808	45327116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45328949_45333603_45333716_45334689_45334780_45335112_45335292_45337492_45337638_45343397
ES.30879.6	chr7	-	2488	4	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	30	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.12825877028341	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAATATTTACCCAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	45343796	45327116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45328949_45333603_45333716_45337492_45337638_45343397
ES.30879.7	chr7	-	2280	6	NNC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	29	-485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.17687164221791	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTACTTCAGCTTAC	NA	False	NA	NA	False	NA	NA	NA	45343797	45327594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45328949_45333603_45333716_45334689_45334780_45335112_45335292_45337492_45337638_45343397
ES.30879.8	chr7	-	1838	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	44	-498	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTGGGGAGCAAAGAGCC	NA	False	NA	NA	False	NA	NA	NA	45343782	45327607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45328949_45333603_45333716_45343397
ES.3088.1	chr10	+	5008	1	FSM	ENSMUSG00000053830.5	ENSMUST00000217785.2	1836	1	-120	-3052	-120	3052	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTCCTAGTGGGTTGC	NA	False	NA	NA	False	TATAAA	-39	NA	72145030	72150038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_72145000_72150000
ES.30880.1	chr7	-	3313	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	481	-826	481	8	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTCTTCAAATTCTCCA	6438	False	NA	NA	False	AATAAA	-28	NA	45364150	45358882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
ES.30880.10	chr7	-	3024	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	-34	-22	-34	4	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCCTTTCAGTTATTG	5923	False	NA	-2	True	AATAAA	-39	NA	45364665	45359686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
ES.30880.13	chr7	-	2644	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-67	0	33	0	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	3195	False	NA	-6	True	AATAAA	-35	NA	45367393	45359690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ES.30880.14	chr7	-	2845	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	50.0611870512435	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3214	False	NA	-7	True	AATAAA	-34	NA	45367374	45359691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682_45366833_45367124
ES.30880.15	chr7	-	2771	6	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-40	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	49.7087517445369	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3222	False	NA	-7	True	AATAAA	-34	NA	45367366	45359691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361237_45361481_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ES.30880.16	chr7	-	3089	7	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	41.7748595316476	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGACATCCCTTTCAGT	3165	False	NA	-7	True	AATAAA	-34	NA	45367423	45359691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366833_45367124
ES.30880.17	chr7	-	2977	6	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	194	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	59.0680962957162	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCGACATCCCTTTCA	3456	False	NA	-9	True	AATAAA	-32	NA	45367132	45359693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361237_45361481_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682
ES.30880.2	chr7	-	3900	6	ISM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	293	-8	193	8	intron_retention	FALSE	canonical	3	87	junction_5	18.0554700852678	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTCTTCAAATTCTCCA	3455	False	NA	NA	False	AATAAA	-28	NA	45367133	45358882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416
ES.30880.20	chr7	-	2864	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	51.1899224776255	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTCACCCCTTCCACC	3195	False	NA	-23	True	AATAAA	-18	NA	45367393	45359707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366666_45366833_45367124
ES.30880.21	chr7	-	3733	3	NIC	ENSMUSG00000057342.16	novel	2968	6	NA	NA	-33	0	intron_retention	FALSE	canonical	3	87	junction_2	23.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3229	False	NA	-24	True	AATAAA	-17	NA	45367359	45359708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45362030_45362683_45363153_45366416
ES.30880.22	chr7	-	2565	7	NNC	ENSMUSG00000057342.16	novel	2968	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.6252623838571	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	5959	False	NA	-24	True	AATAAA	-17	NA	45364629	45359708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020_45364182_45364582
ES.30880.23	chr7	-	2798	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	50.961369923598	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCTTCACCCCTTCC	3226	False	NA	-26	True	AATAAA	-15	NA	45367362	45359710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366698_45366833_45367124
ES.30880.3	chr7	-	3609	7	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	213	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	45.2232118373838	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGCTGGTCTTCAAA	3475	False	NA	NA	False	AATAAA	-21	NA	45367113	45358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366751
ES.30880.4	chr7	-	3098	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-28	272	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	50.0611870512435	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACGTTCTTCGGGCACC	3234	False	NA	NA	False	TATAAA	-16	NA	45367354	45359418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682_45366833_45367124
ES.30880.5	chr7	-	2894	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	-47	-270	-47	270	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGACGTTCTTCGGGCA	3215	False	NA	NA	False	TATAAA	-14	NA	45367373	45359420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ES.30880.6	chr7	-	2928	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	89	531	-11	269	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGACGTTCTTCGGGC	3251	False	NA	NA	False	TATAAA	-13	NA	45367337	45359421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ES.30880.7	chr7	-	2830	6	NIC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	161	260	intron_retention	FALSE	canonical	3	70	junction_5	25.7480096318143	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGCATCATGACGT	3423	False	NA	NA	False	TATAAA	-4	NA	45367165	45359430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45361236_45361481_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ES.30880.8	chr7	-	2814	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	4	730	4	70	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGCCAGTAGCTGCT	3166	False	NA	64	True	NA	NA	NA	45367422	45359620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ES.30880.9	chr7	-	2868	5	NIC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	-28	5	intron_retention	FALSE	canonical	3	70	junction_4	24.4438131231606	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCCTTTCAGTTATTGT	3234	False	NA	-1	True	AATAAA	-40	NA	45367354	45359685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45361236_45361481_45362030_45362683_45363153_45366416_45366488_45367124
ES.30881.1	chr7	-	1239	7	FSM	ENSMUSG00000003271.18	ENSMUST00000075571.16	1193	7	-51	5	-51	-5	multi-exon	FALSE	canonical	0	0	junction_6	5.39804491356722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTCCCTCCTCTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	45409087	45379411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45408815
ES.30881.2	chr7	-	991	7	NNC	ENSMUSG00000003271.18	novel	1193	7	NA	NA	-6973	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	2.80871659105879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTCCCTCCTCTGTGC	7863	False	NA	NA	False	AATAAA	-12	NA	45399143	45379411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45399119
ES.30882.1	chr7	-	696	2	Intergenic	novelGene_25418	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCGGTCCTTCTTCCTT	6155	False	NA	NA	False	NA	NA	NA	45431906	45413194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45413329_45431344
ES.30882.2	chr7	-	160	1	Intergenic	novelGene_25419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	8093	False	NA	NA	False	NA	NA	NA	45429968	45429808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45429800_45430000
ES.30883.1	chr7	+	3206	1	NIC	ENSMUSG00000062044.17	novel	5051	16	NA	NA	5931	4298	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGGAGGCAATAAACT	3201	False	NA	NA	False	NA	NA	NA	45443102	45446308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45443100_45446300
ES.30884.1	chr7	-	2527	12	NNC	ENSMUSG00000003269.18	novel	2527	12	NA	NA	-7	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	132.289502216518	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGCATCAGAGGTTCTT	3179	False	NA	NA	False	AATAAA	-42	NA	45463718	45456037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457876_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.10	chr7	-	3249	11	NIC	ENSMUSG00000003269.18	novel	2527	12	NA	NA	1	21	intron_retention	FALSE	canonical	3	408	junction_8	27.8560585869573	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGCAGATGCCCTCATT	3158	False	NA	NA	False	NA	NA	NA	45463739	45457011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.11	chr7	-	2488	11	ISM	ENSMUSG00000003269.18	ENSMUST00000209245.2	1512	12	16	-51	1	21	intron_retention	FALSE	canonical	1	1	junction_4	137.283830074776	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGCAGATGCCCTCATT	3187	False	NA	NA	False	NA	NA	NA	45463710	45457011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432
ES.30884.12	chr7	-	3579	10	NIC	ENSMUSG00000003269.18	novel	1510	13	NA	NA	0	21	intron_retention	FALSE	canonical	2	111	junction_4	111.46776093739	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGCAGATGCCCTCATT	3191	False	NA	NA	False	NA	NA	NA	45463706	45457011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45462581_45463521
ES.30884.13	chr7	-	2061	10	NNC	ENSMUSG00000003269.18	novel	1512	12	NA	NA	-3	21	intron_retention	FALSE	canonical	0	0	junction_4	144.734239211045	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGCAGATGCCCTCATT	3183	False	NA	NA	False	NA	NA	NA	45463714	45457011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457918_45459546_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.14	chr7	-	2991	12	NNC	ENSMUSG00000003269.18	novel	1510	13	NA	NA	-3	20	intron_retention	FALSE	canonical	0	0	junction_5	176.185054853467	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCTGCAGATGCCCTCAT	3183	False	NA	NA	False	NA	NA	NA	45463714	45457012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457918_45458153_45459663_45459990_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.15	chr7	-	3497	11	NIC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	5	19	intron_retention	FALSE	canonical	2	111	junction_4	106.099434494252	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCTGCAGATGCCCTCA	3176	False	NA	NA	False	NA	NA	NA	45463721	45457013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45462338_45462432_45462581_45463521
ES.30884.16	chr7	-	1594	11	NIC	ENSMUSG00000003269.18	novel	1512	12	NA	NA	29	17	intron_retention	FALSE	canonical	1	1	junction_3	135.544236321579	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCCTGCAGATGCCCT	3220	False	NA	NA	False	NA	NA	NA	45463677	45457015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.17	chr7	-	2915	8	NNC	ENSMUSG00000003269.18	novel	1512	12	NA	NA	15	12	intron_retention	FALSE	canonical	0	0	junction_5	204.832335616928	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTTGCGCCTGCAGAT	3206	False	NA	NA	False	NA	NA	NA	45463691	45457020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45460285_45460952_45461034_45461603_45461723_45462270
ES.30884.18	chr7	-	3819	10	NIC	ENSMUSG00000003269.18	novel	2527	12	NA	NA	-16	12	intron_retention	FALSE	canonical	3	408	junction_7	28.9942523039768	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTTGCGCCTGCAGAT	3141	False	NA	NA	False	NA	NA	NA	45463756	45457020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45459663_45459994_45460144_45460277_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.19	chr7	-	3843	11	NIC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	25	12	intron_retention	FALSE	canonical	2	111	junction_4	105.161066940194	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTTGCGCCTGCAGAT	3216	False	NA	NA	False	NA	NA	NA	45463681	45457020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432
ES.30884.21	chr7	-	3341	9	NIC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	144	junction_4	106.85321415381	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTATTTAATCCCTTG	3190	False	NA	NA	False	NA	NA	NA	45463707	45457031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45460144_45460277_45460391_45460952_45461034_45461603_45462338_45462432
ES.30884.22	chr7	-	1268	10	NNC	ENSMUSG00000003269.18	novel	2519	12	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	144.734239211045	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTATTTAATCCCTTG	3185	False	NA	NA	False	NA	NA	NA	45463712	45457031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45460273_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.3	chr7	-	2851	11	NNC	ENSMUSG00000003269.18	novel	1510	13	NA	NA	-7	29	intron_retention	FALSE	canonical	1	4	junction_4	179.852272712913	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCATTTCTTGGGT	3179	False	NA	NA	False	NA	NA	NA	45463718	45457003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457918_45458153_45459663_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.5	chr7	-	1600	12	FSM	ENSMUSG00000003269.18	ENSMUST00000209245.2	1512	12	-30	-58	-16	28	multi-exon	FALSE	canonical	1	1	junction_4	132.007888569692	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCCTCATTTCTTGGG	3141	False	NA	NA	False	NA	NA	NA	45463756	45457004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ES.30884.7	chr7	-	1653	11	NIC	ENSMUSG00000003269.18	novel	1512	12	NA	NA	-3	28	intron_retention	FALSE	canonical	1	1	junction_4	137.903444482	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCCTCATTTCTTGGG	3183	False	NA	NA	False	NA	NA	NA	45463714	45457004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462581_45463521
ES.30884.8	chr7	-	3950	10	NIC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	20	26	intron_retention	FALSE	canonical	2	111	junction_3	109.585864637713	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGCCCTCATTTCTTG	3211	False	NA	NA	False	NA	NA	NA	45463686	45457006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457672_45457796_45457874_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432
ES.30884.9	chr7	-	4820	6	NIC	ENSMUSG00000003269.18	novel	1983	11	NA	NA	28	26	intron_retention	FALSE	canonical	3	408	junction_5	34.0904678759327	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGCCCTCATTTCTTG	3219	False	NA	NA	False	NA	NA	NA	45463678	45457006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45457273_45457356_45457512_45457599_45460391_45460952_45461034_45461603_45461723_45462270
ES.30885.1	chr7	-	2403	2	ISM	ENSMUSG00000058743.7	ENSMUST00000071937.7	2681	3	4759	2	3321	-2	3prime_fragment	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTTCTGTAGTAAG	5620	False	NA	NA	False	TATAAA	-18	NA	45469447	45465885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45467637_45468795
ES.30886.1	chr7	+	1050	2	NNC	ENSMUSG00000110020.2	novel	1235	2	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCCAGTGGGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	45480301	45484669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45480327_45483644
ES.30887.1	chr7	-	2447	2	Fusion	ENSMUSG00000053801.19_ENSMUSG00000058743.7	novel	1783	6	NA	NA	-1252	1768	multi-exon	TRUE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGTGGCTCCTTTATA	9051	False	NA	NA	False	NA	NA	NA	45475458	45472878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_45473454_45473586
ES.30887.10	chr7	-	1881	7	NNC	ENSMUSG00000053801.19	novel	1898	7	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	187.123548016337	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACAAGTCCTCTGAGC	8638	False	NA	-9	True	AATAAA	-26	NA	45480209	45474655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479413_45479569_45479715_45479834_45480018
ES.30887.11	chr7	-	3944	4	NIC	ENSMUSG00000053801.19	novel	1783	6	NA	NA	1	-7	intron_retention	FALSE	canonical	2	14	junction_3	207.004562483267	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAAGCTACAAGTCCTC	8635	False	NA	-14	True	AATAAA	-21	NA	45480212	45474660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45475518_45476564_45477093_45477203_45479569_45480018
ES.30887.12	chr7	-	2824	5	NIC	ENSMUSG00000053801.19	novel	1783	6	NA	NA	-3	-9	intron_retention	FALSE	canonical	2	14	junction_4	201.75046468348	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACCAAGCTACAAGTCC	8625	False	NA	-16	True	AATAAA	-19	NA	45480222	45474662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
ES.30887.13	chr7	-	532	2	ISM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	6	4578	0	-3745	5prime_fragment	FALSE	canonical	2	14	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGGTGAAACGCAAGGG	8634	False	NA	NA	False	AATAAA	-18	NA	45480213	45479231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45479569_45480018
ES.30887.2	chr7	-	2276	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	-371	-7	-216	3	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGCTTCTTTGCTGTG	8263	False	NA	3	True	AATAAA	-38	NA	45480584	45474643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ES.30887.3	chr7	-	3762	5	NIC	ENSMUSG00000053801.19	novel	1783	6	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	200.10872044966	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTCTGAGCTTCTTTG	8642	False	NA	-2	True	AATAAA	-33	NA	45480205	45474648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45479569_45480018
ES.30887.4	chr7	-	3879	6	NIC	ENSMUSG00000053801.19	novel	1898	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	447	junction_1	34.8390585406667	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8638	False	NA	-7	True	AATAAA	-28	NA	45480209	45474653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45479569_45479715_45479834_45480018
ES.30887.5	chr7	-	4947	5	NIC	ENSMUSG00000053801.19	novel	1898	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	459	junction_2	28.3405628031625	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8617	False	NA	-7	True	AATAAA	-28	NA	45480230	45474653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45476763_45476949_45477093_45477203_45479569_45479715_45479834_45480018
ES.30887.6	chr7	-	1832	7	NNC	ENSMUSG00000053801.19	novel	1898	7	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	186.154654939262	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACAAGTCCTCTGAGC	8607	False	NA	-9	True	AATAAA	-26	NA	45480240	45474655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45475430_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ES.30887.7	chr7	-	5116	4	NIC	ENSMUSG00000053801.19	novel	1898	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	459	junction_1	32.5371582450998	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACAAGTCCTCTGAGC	8633	False	NA	-9	True	AATAAA	-26	NA	45480214	45474655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45477093_45477203_45479569_45479715_45479834_45480018
ES.30887.9	chr7	-	1792	6	FSM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	-11	2	-11	-2	multi-exon	FALSE	canonical	2	14	junction_5	183.663387750526	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACAAGTCCTCTGAGC	8617	False	NA	-9	True	AATAAA	-26	NA	45480230	45474655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
ES.30888.1	chr7	-	3318	7	NIC	ENSMUSG00000002771.13	novel	5431	12	NA	NA	9127	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1.77169096878911	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTGAGTTCTGTGTC	2980	False	NA	NA	False	AATAAA	-25	NA	45507426	45481304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45483512_45483672_45483906_45484062_45484251_45502626_45502788_45503651_45503882_45506901_45507071_45507296
ES.30888.3	chr7	-	3693	8	NIC	ENSMUSG00000002771.13	novel	5431	12	NA	NA	8902	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1.66598625567009	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCAAGCCTGAGTTCTG	2755	False	NA	NA	False	AATAAA	-21	NA	45507651	45481308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45483512_45483672_45483906_45484062_45484251_45502626_45502788_45503651_45503882_45506163_45506318_45506901_45507071_45507296
ES.30888.4	chr7	-	3481	8	NNC	ENSMUSG00000002771.13	novel	5431	12	NA	NA	9226	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	1.8070158058105	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTCCAAGCCTGAGT	3079	False	NA	NA	False	AATAAA	-17	NA	45507327	45481312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45482302_45482383_45483512_45483672_45483906_45484062_45484251_45502626_45502788_45503651_45503882_45503997_45504124_45506901
ES.30889.1	chr7	+	1575	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	24	0	24	0	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	3968	False	NA	17	True	AATAAA	-21	NA	45522219	45533156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ES.30889.2	chr7	+	1039	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	45	515	-8	-30	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAACAAAAAACAAAT	3989	False	NA	-15	True	NA	NA	NA	45522240	45532641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ES.30889.3	chr7	+	2132	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	53	-586	0	586	multi-exon	FALSE	canonical	3	208	junction_1	16.5378354085412	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGCTAGCTTTTAAA	3997	False	NA	NA	False	AATAAA	-24	NA	45522248	45533742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ES.30889.4	chr7	+	1311	5	FSM	ENSMUSG00000002778.15	ENSMUST00000211234.2	832	5	6	-485	6	0	multi-exon	FALSE	canonical	2	3	junction_1	102.020524895729	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	4305	False	NA	17	True	AATAAA	-21	NA	45522556	45533156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45522599_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ES.3089.1	chr10	+	1828	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	5	1	5	-1	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	9	True	AATAAA	-22	NA	72490681	72510795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ES.3089.10	chr10	+	3082	3	NIC	ENSMUSG00000019923.15	novel	780	4	NA	NA	-5	835	intron_retention	FALSE	canonical	3	1044	junction_2	0.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAGTTGTAGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	72490721	72494055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_72492706_72492877_72493018_72493097
ES.3089.11	chr10	+	1760	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-5	-4128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	400.663276610784	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTAGTTTCTGCATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	72490721	72500869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72499899
ES.3089.12	chr10	+	2327	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	398.934601565884	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	9	True	AATAAA	-22	NA	72490721	72510795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509258
ES.3089.13	chr10	+	1929	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	3	-4128	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	394.440911484929	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTAGTTTCTGCATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	72490730	72500869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72499721
ES.3089.15	chr10	+	3830	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	4	-1158	3	1158	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGGCAGTTGTGGGGA	NA	False	NA	NA	False	ATTAAA	-21	NA	72490730	72506779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
ES.3089.16	chr10	+	2345	7	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	8	10208	8	1569	5prime_fragment	FALSE	canonical	3	1044	junction_6	66.6424956182031	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCATATCTGCATGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	72490735	72494789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097
ES.3089.18	chr10	+	1753	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	391.543830788548	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72490745	72510792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492369_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ES.3089.19	chr10	+	1828	1	Intergenic	novelGene_2411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTTTGCGTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	72495189	72497017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_72495200_72497000
ES.3089.2	chr10	+	1202	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	-35	-29	16	29	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCGTATTCTGCCTGA	NA	False	NA	42	True	ATTAAA	-43	NA	72490692	72505026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ES.3089.20	chr10	+	6753	1	NIC	ENSMUSG00000019923.15	novel	2676	8	NA	NA	6169	0	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72498244	72504997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_72498200_72505000
ES.3089.21	chr10	+	1279	2	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	8748	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	9	True	AATAAA	-22	NA	72500823	72510795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72501105_72509797
ES.3089.22	chr10	+	4433	1	Genic_Genomic	ENSMUSG00000019923.15	novel	NA	NA	NA	NA	9447	334	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAACCAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	72501522	72505955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_72501500_72506000
ES.3089.23	chr10	+	1674	1	ISM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	13173	48	11824	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAGATGTATAAATAC	NA	False	NA	NA	False	ATTAAA	-20	NA	72503899	72505573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_72503900_72505600
ES.3089.24	chr10	+	5089	1	NIC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	13631	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	9	True	AATAAA	-22	NA	72505706	72510795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_72505700_72510800
ES.3089.25	chr10	+	4693	2	Genic_Genomic	ENSMUSG00000019923.15	novel	1834	8	NA	NA	13966	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72506041	72510792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_72507336_72507393
ES.3089.26	chr10	+	4695	1	Genic_Genomic	ENSMUSG00000019923.15	novel	NA	NA	NA	NA	14236	210	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAATACTGGACTC	NA	False	NA	NA	False	NA	NA	NA	72506311	72511006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_72506300_72511000
ES.3089.3	chr10	+	1879	7	NIC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	928	junction_6	98.4225583898326	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72490707	72510792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493221_72509797
ES.3089.4	chr10	+	1810	9	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-18	49678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	375.039997866894	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACATGGTAGCAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	72490708	72560474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797_72510787_72560456
ES.3089.5	chr10	+	2065	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	-13	624	-13	0	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490713	72504997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
ES.3089.6	chr10	+	1786	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	399.613027100683	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGTCCTTGTTG	NA	False	NA	6	True	AATAAA	-19	NA	72490713	72510792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492694_72492872_72493018_72493097_72493221_72509797
ES.3089.7	chr10	+	4144	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-13	-1930	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	394.440911484929	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAGGGTATTGAGTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	72490713	72503067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72499721
ES.3089.8	chr10	+	3967	8	NNC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	-13	-1929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	400.663276610784	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGGGTATTGAGTAATC	NA	False	NA	NA	False	ATTAAA	-15	NA	72490713	72503068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72499899
ES.30890.1	chr7	-	177	1	Intergenic	novelGene_25420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGCAAACTTCT	6895	False	NA	NA	False	NA	NA	NA	45531595	45531418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45531400_45531600
ES.30891.1	chr7	-	1697	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-30	-945	-1	-739	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGCTTTGGTTTGGTT	NA	False	NA	NA	False	ACTAAA	-16	NA	45546124	45535384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
ES.30891.2	chr7	-	832	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	-48	-62	-4	1	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTGTCTGTTCCTCT	NA	False	NA	-2	True	AGTAAA	-30	NA	45546142	45536267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
ES.30891.3	chr7	-	2305	3	NIC	ENSMUSG00000040231.17	novel	722	4	NA	NA	7	-1	intron_retention	FALSE	canonical	3	61	junction_2	9	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTCCTGTCTGTTCCT	NA	False	NA	-4	True	AGTAAA	-28	NA	45546131	45536269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45538274_45545114_45545316_45546031
ES.30891.4	chr7	-	961	5	FSM	ENSMUSG00000040231.17	ENSMUST00000039049.16	967	5	5	1	5	-1	multi-exon	FALSE	canonical	3	25	junction_2	22.466641938661	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTCCTGTCTGTTCCT	NA	False	NA	-4	True	AGTAAA	-28	NA	45546133	45536269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45536550_45536790_45536931_45538035_45538274_45545114_45545316_45546031
ES.30891.6	chr7	-	1161	5	NNC	ENSMUSG00000040231.17	novel	967	5	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.1843205189261	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTCCTGTCTGTTCCT	NA	False	NA	-4	True	AGTAAA	-28	NA	45546142	45536269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45536550_45536790_45536889_45538035_45538274_45544881_45545316_45546031
ES.30891.7	chr7	-	914	5	NNC	ENSMUSG00000040231.17	novel	967	5	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.2603288151335	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACCCTGTCCTGTCTGT	NA	False	NA	-8	True	AGTAAA	-24	NA	45546132	45536273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45536550_45536790_45536889_45538035_45538274_45545114_45545316_45546031
ES.30892.1	chr7	+	120	1	Intergenic	novelGene_25421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAGCGATGAGGCATGC	5367	False	NA	NA	False	NA	NA	NA	45546239	45546359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45546200_45546400
ES.30892.10	chr7	+	3051	4	NNC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	-975	-1	intron_retention	FALSE	canonical	0	0	junction_1	23.5702260395516	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	1179	False	NA	2	True	AATAAA	-9	NA	45557303	45566832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45559026_45559733_45559875_45565506_45565697_45565834
ES.30892.11	chr7	+	1186	1	Genic_Genomic	ENSMUSG00000002781.20	novel	NA	NA	NA	NA	1329	1099	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTAAAAAAGGAA	21	False	NA	NA	False	NA	NA	NA	45566750	45567936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_45566800_45567900
ES.30892.2	chr7	+	2259	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209292.2	2026	7	-238	5	-98	-1	multi-exon	FALSE	canonical	1	2	junction_4	23.5401548187111	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	5394	False	NA	2	True	AATAAA	-9	NA	45546266	45566832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45558745_45559026_45565506_45565697_45565834
ES.30892.3	chr7	+	2277	9	NNC	ENSMUSG00000002781.20	novel	2297	8	NA	NA	-95	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	23.636571240347	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	5397	False	NA	2	True	AATAAA	-9	NA	45546269	45566832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834_45566355_45566464
ES.30892.4	chr7	+	2229	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	71	-3	-66	3	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTAGTGTGGCTGCAGG	5563	False	NA	10	True	AATAAA	-17	NA	45546435	45566840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ES.30892.5	chr7	+	2479	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	-4	-9	-4	5	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTGTGGCTGCAGGTC	5648	False	NA	12	True	AATAAA	-19	NA	45546520	45566842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ES.30892.6	chr7	+	1587	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	328	551	6	-117	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGTTATTTTATTTC	5980	False	NA	NA	False	NA	NA	NA	45546852	45566282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ES.30892.7	chr7	+	3190	6	NIC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	37	-1	intron_retention	FALSE	canonical	3	48	junction_2	7.25534285888682	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	6011	False	NA	2	True	AATAAA	-9	NA	45546883	45566832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45559026_45565506_45565697_45565834
ES.30892.8	chr7	+	1994	6	NIC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	44	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	24.0116638323961	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	6018	False	NA	2	True	AATAAA	-9	NA	45546890	45566832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45547091_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ES.30892.9	chr7	+	3787	6	NIC	ENSMUSG00000002781.20	novel	2466	7	NA	NA	55	4	intron_retention	FALSE	canonical	0	0	junction_3	22.8595712995673	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAGTGTGGCTGCAGGT	6029	False	NA	11	True	AATAAA	-18	NA	45546901	45566841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45547091_45549055_45549161_45556341_45558358_45558745_45559026_45565506_45565697_45565834
ES.30893.1	chr7	-	3200	1	Antisense	novelGene_ENSMUSG00000002781.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCGCTGGAGAGATGACT	NA	False	NA	NA	False	NA	NA	NA	45559069	45555869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_45555900_45559100
ES.30894.1	chr7	-	1799	1	Intergenic	novelGene_25422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACAAAACAAAATTA	7447	False	NA	NA	False	NA	NA	NA	45563627	45561828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45561800_45563600
ES.30895.1	chr7	-	632	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	104	0	2	0	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGCTCCTCTTCCTTC	4462	False	NA	NA	False	AATAAA	-20	NA	45570724	45567446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
ES.30895.2	chr7	-	787	5	FSM	ENSMUSG00000040212.13	ENSMUST00000164119.3	784	5	-3	0	-3	0	multi-exon	FALSE	canonical	1	1	junction_4	25.7730479377197	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTCGGCTCCTCTT	4908	False	NA	NA	False	AATAAA	-15	NA	45570278	45567451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570059
ES.30896.1	chr7	+	3118	2	NNC	ENSMUSG00000040189.19	novel	2928	4	NA	NA	-332	2992	intron_retention	FALSE	canonical	3	12	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	2657	False	NA	NA	False	NA	NA	NA	45573163	45577483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45574014_45575215
ES.30896.10	chr7	+	2584	15	FSM	ENSMUSG00000040189.19	ENSMUST00000210039.3	2598	15	12	2	11	-2	multi-exon	FALSE	canonical	3	7	junction_9	4.94923205752	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3144	False	NA	10	True	AATAAA	-21	NA	45573650	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.11	chr7	+	2996	14	NNC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	12	-2	intron_retention	FALSE	canonical	1	2	junction_4	6.17879557785329	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3145	False	NA	10	True	AATAAA	-21	NA	45573651	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585665_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.12	chr7	+	3256	13	NNC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	13	-2	intron_retention	FALSE	canonical	1	2	junction_4	6.30420935213573	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3146	False	NA	10	True	AATAAA	-21	NA	45573652	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585665_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597485_45597564
ES.30896.13	chr7	+	2440	3	NNC	ENSMUSG00000040189.19	novel	1078	5	NA	NA	62	2990	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGAGTTGCCTTGGTCAT	3222	False	NA	NA	False	NA	NA	NA	45573728	45577481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45573811_45573921_45574014_45575215
ES.30896.14	chr7	+	2647	11	NIC	ENSMUSG00000040189.19	novel	2460	13	NA	NA	632	3	intron_retention	FALSE	canonical	3	16	junction_3	3.7	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCTGGTTCCTACAAG	3184	False	NA	8	True	AATAAA	-19	NA	45578457	45598383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.15	chr7	+	2262	12	NNC	ENSMUSG00000040189.19	novel	2460	13	NA	NA	660	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.54819227441712	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3212	False	NA	10	True	AATAAA	-21	NA	45578485	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597380_45597485_45597564
ES.30896.16	chr7	+	2602	11	NNC	ENSMUSG00000040189.19	novel	2460	13	NA	NA	661	-2	intron_retention	FALSE	canonical	0	0	junction_9	8.8	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3213	False	NA	10	True	AATAAA	-21	NA	45578486	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597419_45597481_45597564
ES.30896.17	chr7	+	2941	9	NIC	ENSMUSG00000040189.19	novel	2460	13	NA	NA	681	-2	intron_retention	FALSE	canonical	3	16	junction_3	3.96665791315561	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3233	False	NA	10	True	AATAAA	-21	NA	45578506	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046
ES.30896.2	chr7	+	2998	14	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	2	2	intron_retention	FALSE	canonical	2	4	junction_1	5.72444152465817	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCCTGGTTCCTACAA	2991	False	NA	7	True	AATAAA	-18	NA	45573497	45598382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45573691_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.3	chr7	+	3149	13	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	16	junction_5	3.44298804335227	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3125	False	NA	10	True	AATAAA	-21	NA	45573631	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.4	chr7	+	2905	4	ISM	ENSMUSG00000040189.19	ENSMUST00000211367.2	1078	5	-26	4	1	2	intron_retention	FALSE	canonical	3	18	junction_1	2.62466929133727	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTTTGGTCAT	3134	False	NA	NA	False	NA	NA	NA	45573640	45581033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490
ES.30896.5	chr7	+	2906	14	NNC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	6.61449010052482	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGCCTGGTTCCTAC	3134	False	NA	5	True	AATAAA	-16	NA	45573640	45598380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45573744_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.6	chr7	+	2470	15	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	7.4901295593819	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3134	False	NA	10	True	AATAAA	-21	NA	45573640	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45573691_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597409_45597485_45597564
ES.30896.7	chr7	+	4531	14	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	7	junction_8	5.10133988664285	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGTTCCTACAAGTG	3134	False	NA	10	True	AATAAA	-21	NA	45573640	45598385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.8	chr7	+	2980	14	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	16	junction_6	3.49640559303493	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTCCTACAAGTGTG	3134	False	NA	12	True	AATAAA	-23	NA	45573640	45598387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
ES.30896.9	chr7	+	2968	13	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	7	junction_8	5.18745816582864	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTCCTACAAGTGTG	3134	False	NA	12	True	AATAAA	-23	NA	45573640	45598387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45591618_45592001_45592085_45592184_45592354_45596806_45596971_45597046_45597485_45597564
ES.30897.1	chr7	+	181	1	Intergenic	novelGene_25424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGACTGTCCTGTAG	NA	False	NA	NA	False	NA	NA	NA	45601968	45602149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45602000_45602100
ES.30898.1	chr7	-	174	1	Intergenic	novelGene_25423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAGTGTTGGAAAC	NA	False	NA	NA	False	NA	NA	NA	45583144	45582970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_45583000_45583100
ES.30899.1	chr7	-	4000	1	Antisense	novelGene_ENSMUSG00000040189.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTTTTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	45598749	45594749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_45594700_45598700
ES.30899.2	chr7	-	2450	5	NNC	ENSMUSG00000030834.8	novel	257	2	NA	NA	45	21535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.20565096031518	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGACACATTCGTGCA	NA	False	NA	NA	False	AATAAA	-23	NA	45622698	45595443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45596384_45596744_45596877_45602916_45603604_45616503_45617145_45622648
ES.30899.3	chr7	-	2267	4	NNC	ENSMUSG00000030834.8	novel	257	2	NA	NA	22	21461	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.32049379893857	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGTGTGCTACCATCCC	NA	False	NA	NA	False	NA	NA	NA	45622721	45595517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_45596384_45602916_45603604_45616503_45617145_45622648
ES.309.1	chr1	-	178	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAGAGAGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	37250738	37250560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_37250600_37250700
ES.3090.1	chr10	-	198	1	Intergenic	novelGene_2412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAAGTCTCTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	72706040	72705842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_72705800_72706000
ES.30900.1	chr7	+	4274	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	-16	-1	-16	1	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGTGGGGTGCATACA	8077	False	NA	30	True	AATAAA	-30	NA	45683105	45733637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.10	chr7	+	4114	32	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.1319204905517	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8127	False	NA	23	True	AATAAA	-23	NA	45683155	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683196_45683298_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.11	chr7	+	4178	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.1751145419443	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8127	False	NA	23	True	AATAAA	-23	NA	45683155	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45687021_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.12	chr7	+	4215	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	34	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	63.7289747463602	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTGTAACTTGGCA	8127	False	NA	12	True	AATAAA	-12	NA	45683155	45733619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707830_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.13	chr7	+	4209	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	64.9209433764551	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	8128	False	NA	25	True	AATAAA	-25	NA	45683156	45733632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720207_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.15	chr7	+	4172	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	41	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	64.6058218910821	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8134	False	NA	23	True	AATAAA	-23	NA	45683162	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695341_45696300_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.16	chr7	+	3951	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	42	264	42	144	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATAATTTATTATTAT	8135	False	NA	NA	False	NA	NA	NA	45683163	45733372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.18	chr7	+	4103	29	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	42	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.3803077118748	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGTAACTTGGCATAG	8135	False	NA	15	True	AATAAA	-15	NA	45683163	45733622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45691065_45694673_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.19	chr7	+	5345	30	NIC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	42	-4	intron_retention	FALSE	canonical	3	214	junction_14	37.8868394570305	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	8135	False	NA	25	True	AATAAA	-25	NA	45683163	45733632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.2	chr7	+	3880	28	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.8263724913799	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8102	False	NA	22	True	AATAAA	-22	NA	45683130	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45699996_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.20	chr7	+	4149	32	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	42	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	64.1319204905517	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	8135	False	NA	25	True	AATAAA	-25	NA	45683163	45733632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026_45733356_45733417
ES.30900.22	chr7	+	3570	25	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	44	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	63.4538327360049	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTAACTTGGCAT	8137	False	NA	13	True	AATAAA	-13	NA	45683165	45733620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45733001
ES.30900.23	chr7	+	1940	13	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	44	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.4231021637302	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8137	False	NA	23	True	AATAAA	-23	NA	45683165	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45718147_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.24	chr7	+	4023	30	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	44	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	64.0255411282541	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8137	False	NA	22	True	AATAAA	-22	NA	45683165	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730870_45733047
ES.30900.25	chr7	+	3087	21	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	49	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.14991898894	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8142	False	NA	22	True	AATAAA	-22	NA	45683170	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683363_45703950_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.26	chr7	+	4298	32	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	64	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.1116218111014	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTGTAACTTGGCA	8157	False	NA	12	True	AATAAA	-12	NA	45683185	45733619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694776_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45710869_45711084_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.27	chr7	+	4360	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	69	-172	69	172	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATTTCACTTCTTGG	8162	False	NA	NA	False	NA	NA	NA	45683190	45733808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.28	chr7	+	3620	28	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	69	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	63.9076193692354	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8162	False	NA	23	True	AATAAA	-23	NA	45683190	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727557_45733269
ES.30900.29	chr7	+	4156	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	70	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.7536677455807	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGCATAGTGTGGG	8163	False	NA	21	True	AATAAA	-21	NA	45683191	45733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692067_45693671_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715961_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725502_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.3	chr7	+	4215	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_30	63.0641736646093	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATAGTGTGGGGTGC	8110	False	NA	25	True	AATAAA	-25	NA	45683138	45733632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733047
ES.30900.30	chr7	+	4178	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	70	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	65.1473628697961	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8163	False	NA	22	True	AATAAA	-22	NA	45683191	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690982_45691945_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.32	chr7	+	5512	30	NIC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	91	-8	intron_retention	FALSE	canonical	3	214	junction_14	36.4363174849878	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGCATAGTGTGGG	8184	False	NA	21	True	AATAAA	-21	NA	45683212	45733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.35	chr7	+	3829	29	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	4845	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	99.7733336731058	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTAACTTGGCAT	3557	False	NA	13	True	AATAAA	-13	NA	45687966	45733620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706063_45706161_45706500_45706633_45707839_45707977_45710302_45710393_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725502_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.36	chr7	+	3795	29	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	7773	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	67.2110121413242	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	6485	False	NA	22	True	AATAAA	-22	NA	45690894	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727486_45727527_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.37	chr7	+	3304	23	NNC	ENSMUSG00000030835.7	novel	766	3	NA	NA	-2012	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.8947207320395	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	NA	False	NA	22	True	AATAAA	-22	NA	45697532	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45697660_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.39	chr7	+	2375	16	NIC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	-40	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	85.6157825533483	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	19	False	NA	22	True	AATAAA	-22	NA	45707839	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45707977_45710302_45710391_45711192_45711257_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.4	chr7	+	4392	30	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	26	-7	intron_retention	FALSE	canonical	0	0	junction_10	66.1093570291031	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8119	False	NA	22	True	AATAAA	-22	NA	45683147	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45700125_45703931_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.40	chr7	+	1785	11	ISM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	34679	8	9921	-8	3prime_fragment	FALSE	canonical	3	285	junction_2	24.5772252298749	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGCATAGTGTGGG	2277	False	NA	21	True	AATAAA	-21	NA	45717800	45733628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.41	chr7	+	150	1	Intergenic	novelGene_25425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAATAAAAT	2	True	NA	NA	False	NA	NA	NA	45721242	45721392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_45721200_45721400
ES.30900.6	chr7	+	4090	30	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	66.2531268191734	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8120	False	NA	23	True	AATAAA	-23	NA	45683148	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693743_45695268_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.7	chr7	+	4234	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	83.0300079623158	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8121	False	NA	22	True	AATAAA	-22	NA	45683149	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691855_45692063_45693654_45693728_45694772_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.8	chr7	+	4172	30	NIC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	33	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.0545121329893	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	8126	False	NA	23	True	AATAAA	-23	NA	45683154	45733630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_45683397_45686982_45687073_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30900.9	chr7	+	3591	26	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.4116581256258	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGCATAGTGTGGGG	8126	False	NA	22	True	AATAAA	-22	NA	45683154	45733629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_45683397_45686982_45687073_45687966_45688017_45696390_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ES.30901.1	chr7	-	4724	1	Antisense	novelGene_ENSMUSG00000030835.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTTAAATGTCCTTA	2112	False	NA	NA	False	NA	NA	NA	45729836	45725112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_45725100_45729800
ES.30902.1	chr7	-	2843	26	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	-260	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	1.4422205101856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGGCCCAGGCTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	45786313	45753952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45754186_45754887_45754951_45755232_45755367_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287
ES.30902.2	chr7	-	4915	39	FSM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	15	-53	15	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4783759900198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGGCCCAGGCTCTGT	1370	False	NA	NA	False	AATAAA	-18	NA	45829426	45753952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776190_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816316_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ES.30902.3	chr7	-	4697	37	NIC	ENSMUSG00000040136.11	novel	4877	39	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.56618392877894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAGGCCCAGGCTCTG	1347	False	NA	NA	False	AATAAA	-17	NA	45829449	45753953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776190_45776242_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816316_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ES.30903.1	chr7	-	3381	6	ISM	ENSMUSG00000030838.21	ENSMUST00000176371.2	1865	20	26002	-297	-2542	3	3prime_fragment	FALSE	canonical	0	0	junction_2	4.56070170039655	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCTGGGGGTGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	45853736	45844777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_45845159_45846619_45846676_45847776_45847887_45850397_45850498_45850792_45850847_45851056
ES.30904.1	chr7	-	5398	1	NIC	ENSMUSG00000030838.21	novel	3036	27	NA	NA	-8499	-3846	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGAAAAAAGAAA	7793	False	NA	NA	False	NA	NA	NA	45859693	45854295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_45854300_45859700
ES.30905.1	chr7	-	171	1	Intergenic	novelGene_25426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAAACCAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46037885	46037714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46037700_46037900
ES.30906.1	chr7	+	7357	2	FSM	ENSMUSG00000058975.8	ENSMUST00000025202.8	7760	2	399	4	399	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGACTGACTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	46046319	46082774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46047672_46076769
ES.30907.1	chr7	-	2753	1	Intergenic	novelGene_25427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTTGATCATGGT	8240	False	NA	NA	False	NA	NA	NA	46092558	46089805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46089800_46092600
ES.30908.1	chr7	+	1221	1	Antisense	novelGene_ENSMUSG00000030839.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAACCTGT	NA	False	NA	NA	False	NA	NA	NA	46263727	46264948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_46263700_46264900
ES.30909.1	chr7	-	1444	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	5	16	2	1	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCCTGGAGAACCCT	NA	False	NA	-26	True	AATAAA	-19	NA	46289226	46092593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ES.30909.10	chr7	-	1509	10	NNC	ENSMUSG00000030839.13	novel	722	4	NA	NA	-49	56893	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.4849224523299	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTAAAGGCCATTTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	46289104	46225190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46225343_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46288698
ES.30909.11	chr7	-	1953	9	NNC	ENSMUSG00000030839.13	novel	722	4	NA	NA	23	19657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1051434457898	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTACTCTGTTCCCTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	46289205	46262426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46263527_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ES.30909.12	chr7	-	677	1	Genic_Genomic	ENSMUSG00000030839.13	novel	NA	NA	NA	NA	-56	-6315	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTGTTAACGGCAGTC	NA	False	NA	NA	False	ATTAAA	-23	NA	46289111	46288434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_46288400_46289100
ES.30909.2	chr7	-	2863	12	NIC	ENSMUSG00000030839.13	novel	2551	12	NA	NA	-51	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.6612753912236	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAGATTCCCTGGAGA	NA	False	NA	-31	True	AATAAA	-14	NA	46289106	46092598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46092960_46161378_46162485_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46288698
ES.30909.3	chr7	-	1358	10	NIC	ENSMUSG00000030839.13	novel	1465	11	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.5090412342956	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAGATTCCCTGGAGA	NA	False	NA	-31	True	AATAAA	-14	NA	46289208	46092598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ES.30909.4	chr7	-	1263	10	NIC	ENSMUSG00000030839.13	novel	1465	11	NA	NA	19	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.8589588546233	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAGATTCCCTGGAGA	NA	False	NA	-31	True	AATAAA	-14	NA	46289209	46092598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46092960_46165091_46165129_46240030_46240198_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ES.30909.5	chr7	-	1634	11	NIC	ENSMUSG00000030839.13	novel	1465	11	NA	NA	20	-5	combination_of_known_junctions	FALSE	canonical	2	9	junction_10	24.9110417285187	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGATTCCCTGGAG	NA	False	NA	-32	True	AATAAA	-13	NA	46288984	46092599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46288698
ES.30909.6	chr7	-	1784	11	NIC	ENSMUSG00000030839.13	novel	1465	11	NA	NA	-67	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	27.5479581820504	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACAGAAGATTCCCTGG	NA	False	NA	-34	True	AATAAA	-11	NA	46289122	46092601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46288684
ES.30909.7	chr7	-	3859	1	Intergenic	novelGene_25428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAAAAAAACCAAAAA	NA	False	NA	NA	False	AATACA	-32	NA	46129132	46125273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46125300_46129100
ES.30909.8	chr7	-	3503	2	Intergenic	novelGene_25429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-2	NA	46128858	46125303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46127036_46127087
ES.30909.9	chr7	-	1498	1	FSM	ENSMUSG00000110316.2	ENSMUST00000211086.2	1330	1	-206	38	-206	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATGAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	46162410	46160912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46160900_46162400
ES.3091.1	chr10	-	3428	5	Fusion	ENSMUSG00000111994.2_ENSMUSG00000112168.2	novel	1140	3	NA	NA	-25027	1624	multi-exon	FALSE	canonical	0	0	junction_3	4.63680924774785	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGCATGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	72810651	72774445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_72776843_72780098_72780242_72785400_72785926_72806094_72806255_72810448
ES.3091.2	chr10	-	2011	5	Fusion	ENSMUSG00000111994.2_ENSMUSG00000112168.2	novel	1140	3	NA	NA	-25027	295	multi-exon	FALSE	canonical	0	0	junction_2	5.31507290636732	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACTTTTGGTTCTG	NA	False	NA	NA	False	AATAAA	-9	NA	72810651	72775774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_72776843_72780098_72780154_72785400_72785926_72806094_72806255_72810448
ES.3091.3	chr10	-	2218	5	Fusion	ENSMUSG00000111994.2_ENSMUSG00000112168.2	novel	1140	3	NA	NA	-25027	295	multi-exon	FALSE	canonical	0	0	junction_3	4.63680924774785	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACTTTTGGTTCTG	NA	False	NA	NA	False	AATAAA	-9	NA	72810651	72775774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_72776843_72780098_72780242_72785400_72785926_72805975_72806255_72810448
ES.3091.4	chr10	-	1525	1	Genic_Genomic	ENSMUSG00000111994.2	novel	NA	NA	NA	NA	111879	7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTGATTTGTTTAAAA	NA	False	NA	NA	False	GATAAA	-17	NA	72810652	72809127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_72809100_72810700
ES.30910.1	chr7	-	194	1	Intergenic	novelGene_25430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAACAAAAAAATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	46328364	46328170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46328200_46328400
ES.30911.1	chr7	+	166	1	Antisense	novelGene_ENSMUSG00000110010.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46334641	46334807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_46334600_46334800
ES.30912.1	chr7	+	594	1	Intergenic	novelGene_25431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAATGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	46345394	46345988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46345400_46346000
ES.30913.1	chr7	-	7876	12	FSM	ENSMUSG00000110010.2_ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	19	-3167	0	-103	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCCTTTTCATTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	46360085	46332364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.11	chr7	-	3572	11	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	340	junction_5	41.0604432513825	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGCATCGGGATGATG	NA	False	NA	-14	True	AATAAA	-22	NA	46360084	46338729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.13	chr7	-	1412	12	NNC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	160.442724261947	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGCATCGGGATGATG	NA	False	NA	-14	True	AATAAA	-22	NA	46360053	46338729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46338880_46339226_46339320_46342240_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351913_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.15	chr7	-	3160	2	NNC	ENSMUSG00000006763.15	novel	3841	9	NA	NA	15817	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGGCATCGGGATGAT	6529	False	NA	-15	True	AATAAA	-21	NA	46342524	46338730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46340469_46341102
ES.30913.16	chr7	-	3996	10	NNC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	-4	-4	intron_retention	FALSE	canonical	2	10	junction_2	131.574041493988	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTTGGCATCGGGATGA	NA	False	NA	-16	True	AATAAA	-20	NA	46360108	46338731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46338880_46339226_46339320_46342240_46342400_46348787_46348977_46349059_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.17	chr7	-	1490	12	NNC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	165.476322243216	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAAGTTGGCATCGGGATG	NA	False	NA	-17	True	AATAAA	-19	NA	46360084	46338732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352055_46352105_46353437_46353508_46356412_46356501_46358287_46358402_46359921
ES.30913.18	chr7	-	1853	11	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	340	junction_5	42.4086076168506	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGAAGTTGGCATCGGGAT	NA	False	NA	-18	True	AATAAA	-18	NA	46360084	46338733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.19	chr7	-	1597	13	NNC	ENSMUSG00000006763.15	novel	1849	13	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	181.075241420675	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGAAGTTGGCATCGGGAT	NA	False	NA	-18	True	AATAAA	-18	NA	46360094	46338733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351606_46351713_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.2	chr7	-	4141	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	21	566	-1	-566	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCGGCATATACACTTC	NA	False	NA	NA	False	TATAAA	-21	NA	46360083	46336097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.3	chr7	-	3007	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	20	1701	1	1460	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATTCTGTATTGGGGG	NA	False	NA	NA	False	GATAAA	-2	NA	46360084	46337232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.4	chr7	-	4863	11	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	-1	1285	intron_retention	FALSE	canonical	1	12	junction_4	160.696266291411	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCCAGTCTGCATTACT	NA	False	NA	NA	False	NA	NA	NA	46360083	46337407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348972_46349059_46351386_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.5	chr7	-	2128	12	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	46	671	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	119.649557161427	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCGTCTGCCTCCTTTCC	NA	False	NA	NA	False	AATATA	-24	NA	46360019	46338021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.6	chr7	-	2127	13	NNC	ENSMUSG00000006763.15	novel	1849	13	NA	NA	-1	500	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	181.075241420675	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTTGTAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	46360083	46338192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351606_46351713_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.7	chr7	-	1690	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	19	3019	0	142	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGTTGTCACAGTTAA	NA	False	NA	NA	False	NA	NA	NA	46360085	46338550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.8	chr7	-	1592	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	-14	3150	-14	11	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGTAGTCTGCCCTGAT	NA	False	NA	-18	True	AATGAA	-18	NA	46360118	46338681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30913.9	chr7	-	1534	12	NIC	ENSMUSG00000006763.15	novel	4728	12	NA	NA	0	11	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	119.649557161427	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCGTAGTCTGCCCTGAT	NA	False	NA	-18	True	AATGAA	-18	NA	46360085	46338681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ES.30914.1	chr7	+	1732	1	Antisense	novelGene_ENSMUSG00000014418.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46417893	46419625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_46417900_46419600
ES.30915.1	chr7	+	143	1	Intergenic	novelGene_25432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	46419845	46419988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46419800_46420000
ES.30916.1	chr7	+	177	2	Intergenic	novelGene_25433	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTTTATTTCAT	4004	False	NA	NA	False	NA	NA	NA	46426674	46457597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46426722_46457467
ES.30916.10	chr7	+	2691	16	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	149.434430065126	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	4704	False	NA	1	True	AATAAA	-12	NA	46445524	46473221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246_46472673_46472716
ES.30916.11	chr7	+	1922	14	ISM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-2	4424	-2	-3533	5prime_fragment	FALSE	canonical	3	472	junction_5	48.9200531237767	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGCCTTTGCTGCTTTG	4704	False	NA	NA	False	TATAAA	-25	NA	46445524	46468800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545
ES.30916.12	chr7	+	2851	16	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	218.82713624127	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4714	False	NA	3	True	AATAAA	-14	NA	46445534	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453185_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.14	chr7	+	2617	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	212.171388798895	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4720	False	NA	3	True	AATAAA	-14	NA	46445540	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451105_46451265_46453240_46453434_46454384_46454548_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.15	chr7	+	2783	16	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	195.316040190138	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4720	False	NA	4	True	AATAAA	-15	NA	46445540	46473224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46451562_46451624_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.17	chr7	+	2700	15	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	154.367835287759	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	4721	False	NA	1	True	AATAAA	-12	NA	46445541	46473221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466417_46468543_46468639_46472246
ES.30916.19	chr7	+	2090	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	17	629	6	-104	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTATTTAAAGACTGTT	4723	False	NA	NA	False	AATATA	-18	NA	46445543	46472595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.2	chr7	+	180	1	Intergenic	novelGene_25434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	8646	False	NA	NA	False	NA	NA	NA	46436282	46436462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46436300_46436500
ES.30916.21	chr7	+	2279	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	10	20	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTAAGTTTTTCAGTT	4727	False	NA	NA	False	NA	NA	NA	46445547	46472719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.23	chr7	+	3967	12	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	223.63854396572	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4734	False	NA	3	True	AATAAA	-14	NA	46445554	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46463056_46465106_46465899_46468545_46468639_46472246
ES.30916.24	chr7	+	2587	14	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	159.573062044248	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4734	False	NA	3	True	AATAAA	-14	NA	46445554	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46468549_46468639_46472246
ES.30916.25	chr7	+	3337	14	ISM	ENSMUSG00000006599.14	ENSMUST00000107644.2	2187	16	4211	-522	-805	-3	3prime_fragment	FALSE	canonical	3	472	junction_4	48.129878527798	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	9485	False	NA	1	True	AATAAA	-12	NA	46450305	46473221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.26	chr7	+	2750	12	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	2180	-3	intron_retention	FALSE	canonical	3	472	junction_3	42.6449884666688	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	NA	False	NA	1	True	AATAAA	-12	NA	46453290	46473221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46466437_46468545_46468639_46472246
ES.30916.27	chr7	+	176	1	Intergenic	novelGene_25435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	46457421	46457597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46457400_46457600
ES.30916.28	chr7	+	221	1	Intergenic	novelGene_25436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAATCAATCAATAAATA	NA	False	NA	NA	False	NA	NA	NA	46460457	46460678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46460500_46460700
ES.30916.29	chr7	+	177	1	Intergenic	novelGene_25437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGTAAAACTCAAACG	NA	False	NA	NA	False	NA	NA	NA	46464418	46464595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46464400_46464600
ES.30916.3	chr7	+	3102	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-292	5	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTGGAGTCTTGACTG	4414	False	NA	9	True	AATAAA	-20	NA	46445234	46473229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.30	chr7	+	187	2	ISM	ENSMUSG00000006599.14	ENSMUST00000128420.9	1451	13	15286	3641	8521	-3641	internal_fragment	FALSE	canonical	3	568	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCGAGTACATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	46466396	46468692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46466437_46468545
ES.30916.31	chr7	+	5114	1	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	10233	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCTCTCTTGGAGTC	NA	False	NA	2	True	AATAAA	-13	NA	46468108	46473222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46468100_46473200
ES.30916.4	chr7	+	4634	14	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-287	-1	intron_retention	FALSE	canonical	3	472	junction_4	47.2854857198624	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4419	False	NA	3	True	AATAAA	-14	NA	46445239	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.5	chr7	+	3002	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-261	-5	-261	5	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTGGAGTCTTGACTG	4445	False	NA	9	True	AATAAA	-20	NA	46445265	46473229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.6	chr7	+	2502	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	-257	491	-257	34	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTTGTTTTCTGGGTA	4449	False	NA	NA	False	GATAAA	-12	NA	46445269	46472733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ES.30916.8	chr7	+	2570	16	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	149.434430065126	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTCTCTTGGAGTCT	4697	False	NA	3	True	AATAAA	-14	NA	46445517	46473223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246_46472582_46472755
ES.30916.9	chr7	+	2217	13	NNC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	-2	2089	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	160.906006897056	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAATAAATAAAAAA	4704	False	NA	NA	False	NA	NA	NA	46445524	46466931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46445713_46451095_46451265_46453185_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320
ES.30917.1	chr7	-	4544	23	NNC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.4470098264519	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	2	True	AATAAA	-26	NA	46445046	46409889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426455_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.10	chr7	-	4397	23	NIC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	17.3898540762534	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGGATATGAGATTTA	NA	False	NA	-1	True	AATAAA	-23	NA	46445500	46409892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.11	chr7	-	5308	22	NNC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	18.0815737881855	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGGATATGAGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	46445488	46409893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410873_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.12	chr7	-	4498	16	NNC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	-5192	0	intron_retention	FALSE	canonical	1	2	junction_6	16.4713893362602	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGGATATGAGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	46433038	46409893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418522_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46428585_46432566_46432639_46432894
ES.30917.13	chr7	-	4978	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGGATATGAGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	46445504	46409893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.14	chr7	-	4504	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	-86	4	-21	0	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGGATATGAGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	46445509	46409893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.15	chr7	-	4221	21	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.4087629027907	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGGATATGAGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	46445101	46409893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.17	chr7	-	4752	23	NNC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	-885	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	15.3100868818756	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46446373	46409894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445945
ES.30917.19	chr7	-	5441	22	NIC	ENSMUSG00000014418.17	novel	4918	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	21	junction_21	12.7115210120547	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445141	46409894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.2	chr7	-	4456	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	16.6655781957495	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	2	True	AATAAA	-26	NA	46445133	46409889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.20	chr7	-	4437	23	NIC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	17.5969569119772	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445481	46409894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422581_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.21	chr7	-	4429	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	18.2380330721308	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445101	46409894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422581_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.22	chr7	-	5071	24	NNC	ENSMUSG00000014418.17	novel	4735	24	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.3718361968886	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATGGATATGAGATT	NA	False	NA	-3	True	AATAAA	-21	NA	46445500	46409894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418522_46418716_46418838_46421030_46421606_46421895_46421968_46422581_46422694_46424237_46424362_46424577_46424709_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.23	chr7	-	4897	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107653.8	4702	23	-195	0	-12	0	multi-exon	FALSE	canonical	2	3	junction_14	16.3614266184748	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGGATATGAGAT	NA	False	NA	-4	True	AATAAA	-20	NA	46445500	46409895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.24	chr7	-	4497	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	15.5398689938066	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGGATATGAGAT	NA	False	NA	-4	True	AATAAA	-20	NA	46445132	46409895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.25	chr7	-	4523	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	15.8959199830914	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	False	NA	-6	True	AATAAA	-18	NA	46445136	46409897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.26	chr7	-	4584	24	NIC	ENSMUSG00000014418.17	novel	4735	24	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	21.8524870650065	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	False	NA	-6	True	AATAAA	-18	NA	46445500	46409897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422581_46422694_46424237_46424362_46424577_46424709_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.27	chr7	-	3259	8	NIC	ENSMUSG00000014418.17	novel	4918	22	NA	NA	-519	-3	intron_retention	FALSE	canonical	3	51	junction_6	5.54020555133295	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGAACATGGATATGA	NA	False	NA	-7	True	AATAAA	-17	NA	46421930	46409898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46418517_46418716_46418838_46421030_46421606_46421895
ES.30917.28	chr7	-	4396	23	NNC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	17.6385307946847	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGAGAACATGGATATG	NA	False	NA	-8	True	AATAAA	-16	NA	46445499	46409899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425284_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.29	chr7	-	4383	22	NIC	ENSMUSG00000014418.17	novel	4422	23	NA	NA	-13	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	16.9414089694004	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGGAGAACATGGATATG	NA	False	NA	-8	True	AATAAA	-16	NA	46445501	46409899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.3	chr7	-	4821	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	16.5931712862049	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	0	True	AATAAA	-24	NA	46445501	46409891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.30	chr7	-	3498	7	NIC	ENSMUSG00000014418.17	novel	4726	23	NA	NA	1289	143	intron_retention	FALSE	canonical	0	0	junction_6	26.6171415111056	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACCCAAACGCTCAC	NA	False	NA	NA	False	AATATA	-22	NA	46423051	46410259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46418838_46421030_46421606_46421895_46421968_46422581
ES.30917.31	chr7	-	4608	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-12	143	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACCCAAACGCTCAC	NA	False	NA	NA	False	AATATA	-22	NA	46445500	46410259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.32	chr7	-	4524	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-34	37	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	12.4724489764871	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTCAGTTTCAAGTATT	NA	False	NA	NA	False	TTTAAA	-22	NA	46445522	46410365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.33	chr7	-	4067	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107653.8	4702	23	153	482	-25	25	multi-exon	FALSE	canonical	2	3	junction_14	16.3614266184748	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTGAGTTGAGCTCA	NA	False	NA	NA	False	AATAAA	-38	NA	46445152	46410377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.34	chr7	-	4496	23	FSM	ENSMUSG00000014418.17	ENSMUST00000014562.14	4953	23	-49	506	-12	7	multi-exon	FALSE	canonical	3	17	junction_22	12.9471270625399	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAATAAGACTGCCC	NA	False	NA	NA	False	AATAAA	-20	NA	46445500	46410395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.35	chr7	-	3991	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	-77	508	-12	5	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTTTAAATAAGACTGC	NA	False	NA	NA	False	AATAAA	-18	NA	46445500	46410397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ES.30917.36	chr7	-	4016	23	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-13	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	15.1583923786176	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTTTAAATAAGACTGC	NA	False	NA	NA	False	AATAAA	-18	NA	46445501	46410397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46445330
ES.30917.37	chr7	-	6857	16	NIC	ENSMUSG00000014418.17	novel	4918	22	NA	NA	2567	3	intron_retention	FALSE	canonical	1	1	junction_15	16.8712773671705	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGTTTTAAATAAGACT	NA	False	NA	NA	False	AATAAA	-16	NA	46437873	46410399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46425376_46426299_46426459_46427444_46428585_46432566_46432639_46432894_46433142_46435933
ES.30917.38	chr7	-	4217	21	NNC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.1014619258121	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTAGAGTTTTAAATAA	NA	False	NA	NA	False	AATAAA	-12	NA	46445500	46410403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414339_46418386_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.39	chr7	-	3307	16	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-12	-4422	combination_of_known_junctions	FALSE	canonical	3	21	junction_15	12.6484078927833	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAACATAGAAAGTAAGGG	NA	False	NA	NA	False	CATAAA	-17	NA	46445500	46420827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.40	chr7	-	2822	9	NNC	ENSMUSG00000014418.17	novel	813	6	NA	NA	7	-4813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.0592242610659	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAGCAAAACC	NA	False	NA	NA	False	NA	NA	NA	46445120	46430075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46430090_46430971_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.5	chr7	-	4596	23	NNC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	16.6279785127804	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	0	True	AATAAA	-24	NA	46445162	46409891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427535_46428472_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ES.30917.6	chr7	-	4331	22	NIC	ENSMUSG00000014418.17	novel	4953	23	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.0997457762213	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	0	True	AATAAA	-24	NA	46445126	46409891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.7	chr7	-	4440	12	NIC	ENSMUSG00000014418.17	novel	4918	22	NA	NA	-179	-2	intron_retention	FALSE	canonical	1	3	junction_2	17.4682711184527	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	0	True	AATAAA	-24	NA	46428025	46409891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46425376_46426299_46426459_46427444
ES.30917.8	chr7	-	4855	23	NIC	ENSMUSG00000014418.17	novel	4702	23	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	16.0075524530513	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGATATGAGATTTAC	NA	False	NA	0	True	AATAAA	-24	NA	46445478	46409891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46444851
ES.30917.9	chr7	-	5384	23	ISM	ENSMUSG00000014418.17	ENSMUST00000142663.8	4735	24	3703	3	-959	1	3prime_fragment	FALSE	canonical	1	1	junction_11	18.4346063354714	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGGATATGAGATTTA	NA	False	NA	-1	True	AATAAA	-23	NA	46441399	46409892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46424577_46424709_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340
ES.30918.1	chr7	-	4993	3	Antisense	novelGene_ENSMUSG00000006599.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46455185	46447265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_46451265_46453240_46453431_46454381
ES.30918.2	chr7	-	2618	4	Antisense	novelGene_ENSMUSG00000006599.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCCCAACAGCTGATT	NA	False	NA	NA	False	AAAAAG	-12	NA	46455317	46449671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_46450701_46450801_46451265_46453240_46453431_46454381
ES.30919.1	chr7	+	178	1	Intergenic	novelGene_25438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	46474408	46474586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46474400_46474600
ES.3092.1	chr10	-	224	1	Intergenic	novelGene_2413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGTGTTTTTTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	73091386	73091162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_73091200_73091400
ES.30920.1	chr7	+	178	1	Intergenic	novelGene_25439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	46477954	46478132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46478000_46478100
ES.30921.1	chr7	+	1606	8	NNC	ENSMUSG00000063229.16	novel	685	5	NA	NA	-384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2907.89742401128	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46490514	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46490613_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.10	chr7	+	1561	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2898.69849753158	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495266	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499754_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.11	chr7	+	3261	7	NIC	ENSMUSG00000063229.16	novel	1815	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7665	junction_3	435.699310177201	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495266	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.13	chr7	+	1580	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2831.03902466633	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495266	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501411_46503401_46503531_46504400
ES.30921.15	chr7	+	1557	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2907.89742401128	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGCTCTTTTATT	NA	False	NA	17	True	AATAAA	-13	NA	46495266	46505049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495317_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.16	chr7	+	1436	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2812.33170743656	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495266	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503494_46504510
ES.30921.17	chr7	+	1569	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2891.44232069007	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGCTCTTTTATT	NA	False	NA	17	True	AATAAA	-13	NA	46495266	46505049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501313_46501419_46503406_46503531_46504400
ES.30921.18	chr7	+	5171	6	NNC	ENSMUSG00000063229.16	novel	1277	7	NA	NA	0	2673	intron_retention	FALSE	non_canonical	0	0	junction_5	3116.20044284703	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGAAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	46495266	46507724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46504040_46506801
ES.30921.19	chr7	+	1601	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	63582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2722.83995811359	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCCTAAAAGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	46495266	46568633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46505048_46568612
ES.30921.2	chr7	+	1803	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	-191	-24	-191	24	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGGTAGCTGGTCAGT	NA	False	NA	43	True	AATAAA	-39	NA	46495071	46505075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.20	chr7	+	1633	10	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	26491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3382.35474992216	2560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGTGCTCGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	46495266	46531542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46505048_46530842_46530878_46531524
ES.30921.22	chr7	+	1517	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2722.83995811359	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495267	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400_46504916_46504978
ES.30921.23	chr7	+	2455	7	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	5	-2	1	2	intron_retention	FALSE	canonical	3	6684	junction_1	623.11689647021	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCTCTTTTATTAAGA	NA	False	NA	21	True	AATAAA	-17	NA	46495267	46505053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406
ES.30921.24	chr7	+	4441	6	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	5	0	1	0	intron_retention	FALSE	canonical	3	6684	junction_1	552.930592389316	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495267	46505051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300
ES.30921.25	chr7	+	1588	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2862.36284583637	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495267	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499595_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.26	chr7	+	3159	8	NIC	ENSMUSG00000063229.16	novel	1815	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	37	junction_1	2895.07585463346	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495267	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46496921_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.27	chr7	+	4387	6	NIC	ENSMUSG00000063229.16	novel	1277	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	6684	junction_1	728.350300336315	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGCTCTTTTATT	NA	False	NA	17	True	AATAAA	-13	NA	46495267	46505049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46503531_46504400
ES.30921.28	chr7	+	1416	7	NNC	ENSMUSG00000063229.16	novel	1277	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3021.28082202823	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGCTCTTTTATT	NA	False	NA	17	True	AATAAA	-13	NA	46495267	46505049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500480_46503450_46503531_46504400
ES.30921.29	chr7	+	6221	5	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	5	-962	1	962	intron_retention	FALSE	canonical	3	6684	junction_1	613.543957267937	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCTTGTCCCAGAACT	NA	False	NA	NA	False	AATAAA	-19	NA	46495267	46506013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308
ES.30921.31	chr7	+	3568	7	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	6684	junction_1	665.404325704805	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495267	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46503531_46504400
ES.30921.33	chr7	+	1572	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2812.33170743656	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495267	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504408
ES.30921.36	chr7	+	2211	1	NIC	ENSMUSG00000063229.16	novel	912	6	NA	NA	1	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	2429	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAAGTAACAGCGTCA	NA	False	NA	NA	False	NA	NA	NA	46495267	46497478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46495300_46497500
ES.30921.37	chr7	+	1763	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3579.81354044802	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495269	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46495687_46495871_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.39	chr7	+	1521	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2898.69849753158	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495269	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499751_46500342_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.40	chr7	+	3586	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	3	63582	intron_retention	FALSE	canonical	0	0	junction_7	2831.03902466633	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGCCTAAAAGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	46495269	46568633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46503531_46504400_46505048_46568612
ES.30921.42	chr7	+	1928	8	NNC	ENSMUSG00000063229.16	novel	934	7	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	2903.73895492817	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495494	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495915_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.43	chr7	+	1730	8	NIC	ENSMUSG00000063229.16	novel	934	7	NA	NA	128	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	2902.00629403388	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495648	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46495871_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.44	chr7	+	3610	6	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	523	3	265	-2	intron_retention	FALSE	canonical	3	7665	junction_3	361.413668806259	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495785	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406
ES.30921.45	chr7	+	1858	8	FSM	ENSMUSG00000063229.16	ENSMUST00000209984.2	1815	8	-44	1	-44	-1	multi-exon	FALSE	canonical	2	26	junction_1	2898.88755580904	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGCTCTTTTATT	NA	False	NA	17	True	AATAAA	-13	NA	46496461	46505049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.46	chr7	+	153	2	Antisense	novelGene_ENSMUSG00000109231.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2586	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATAATTAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	46499255	46598315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_46499335_46598241
ES.30921.47	chr7	+	164	1	Intergenic	novelGene_25441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	46499256	46499420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46499300_46499400
ES.30921.48	chr7	+	1215	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	7	148	7	-106	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATCTCAAGGCTAGAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	46510633	46527418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ES.30921.49	chr7	+	278	1	Intergenic	novelGene_25443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	46513214	46513492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46513200_46513500
ES.30921.5	chr7	+	1751	8	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2907.20433771424	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495240	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495486_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.50	chr7	+	209	1	Intergenic	novelGene_25444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCAGAGGTAGGTGG	NA	False	NA	NA	False	NA	NA	NA	46515313	46515522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46515300_46515500
ES.30921.51	chr7	+	1344	1	Antisense	novelGene_ENSMUSG00000014402.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCAAAAAATCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46542069	46543413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_46542100_46543400
ES.30921.52	chr7	+	182	1	Intergenic	novelGene_25445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46579196	46579378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46579200_46579400
ES.30921.6	chr7	+	1660	9	NNC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3579.81354044802	2545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCTCTGCTCTTTTAT	NA	False	NA	16	True	AATAAA	-12	NA	46495240	46505048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_46495342_46495817_46495871_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30921.8	chr7	+	5261	5	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	2	1	0	0	intron_retention	FALSE	canonical	3	6684	junction_1	613.543957267937	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495264	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308
ES.30921.9	chr7	+	1692	9	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_2	3566.89334146327	2545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTGCTCTTTTATTA	NA	False	NA	18	True	AATAAA	-14	NA	46495265	46505050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46495342_46496812_46496921_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ES.30922.1	chr7	-	278	1	Intergenic	novelGene_25440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCGTGCCGGTCTATCC	NA	False	NA	NA	False	NA	NA	NA	46495149	46494871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46494900_46495100
ES.30923.1	chr7	-	1352	1	Antisense	novelGene_ENSMUSG00000063229.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGACTTTGCTACCTTTG	NA	False	NA	NA	False	NA	NA	NA	46498287	46496935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_46496900_46498300
ES.30924.1	chr7	-	178	1	Intergenic	novelGene_25442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46506626	46506448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46506400_46506600
ES.30925.1	chr7	-	2272	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	7	-330	7	330	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTCAGATCTTTACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	46569710	46538366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.10	chr7	-	4965	9	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-2	214	intron_retention	FALSE	canonical	3	992	junction_2	90.0746218421149	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	-32	True	AATAAA	-16	NA	46569694	46539119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.11	chr7	-	4928	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	214	intron_retention	FALSE	canonical	3	992	junction_2	93.380066045671	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	-32	True	AATAAA	-16	NA	46569716	46539119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46560559_46563125_46563211_46569568
ES.30925.12	chr7	-	1408	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	3	212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	462.151490314594	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569689	46539121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563200_46569568
ES.30925.13	chr7	-	1293	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-1	210	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	466.026730542623	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569686	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
ES.30925.14	chr7	-	1204	8	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	210	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	542.085880687568	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569715	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540753_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.15	chr7	-	3151	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-1	210	intron_retention	FALSE	canonical	3	15	junction_4	423.110541835399	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569686	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46556798_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.16	chr7	-	1427	9	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	3	210	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	396.88718485232	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569689	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.17	chr7	-	4824	7	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	210	intron_retention	FALSE	canonical	3	15	junction_4	453.093073587904	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569683	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46556798_46560559_46563125_46563211_46569568
ES.30925.2	chr7	-	1956	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	-10	3	-10	-3	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGTACTCTTTGCAA	NA	False	NA	NA	False	AATAAA	-27	NA	46569727	46538699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.20	chr7	-	4848	9	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-10	210	intron_retention	FALSE	canonical	3	35	junction_2	393.241795051086	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569702	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.21	chr7	-	1416	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	210	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	371.218746865903	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569716	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558712_46560492_46560559_46563125_46563211_46569568
ES.30925.22	chr7	-	1464	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	1	210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	379.054672104756	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569716	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540910_46542105_46542252_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.23	chr7	-	7351	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	4	210	intron_retention	FALSE	canonical	3	992	junction_2	96.1448736787036	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569681	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.24	chr7	-	1281	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	10	210	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	546.722031375942	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTCTTTCTTGGAC	NA	False	NA	-36	True	AATAAA	-12	NA	46569707	46539123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46556798_46556926_46560492_46560559_46563125_46563211_46569568
ES.30925.25	chr7	-	3167	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	209	intron_retention	FALSE	non_canonical	0	0	junction_2	507.934378963792	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569683	46539124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540917_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46558817_46560492_46560559_46563125_46563211_46569568_46569605_46569658
ES.30925.26	chr7	-	7278	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-1	209	intron_retention	FALSE	canonical	3	163	junction_5	371.061576935084	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569686	46539124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
ES.30925.27	chr7	-	3881	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	8	209	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_8	457.795630719836	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569677	46539124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46563036_46563125_46563211_46569568
ES.30925.28	chr7	-	1344	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-7	209	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569699	46539124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.29	chr7	-	3118	9	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	9	209	intron_retention	FALSE	canonical	3	35	junction_2	393.747678564585	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTCTTTCTTGGA	NA	False	NA	-37	True	AATAAA	-11	NA	46569708	46539124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.30	chr7	-	1486	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-2	208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	376.765178858132	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCTCTTTCTTGG	NA	False	NA	-38	True	AATAAA	-10	NA	46569694	46539125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563200_46569568
ES.30925.31	chr7	-	3902	9	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-2	208	intron_retention	FALSE	non_canonical	0	0	junction_7	392.464249964248	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCTCTTTCTTGG	NA	False	NA	-38	True	AATAAA	-10	NA	46569694	46539125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563123_46563211_46569568
ES.30925.33	chr7	-	4773	8	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	-3	208	intron_retention	FALSE	canonical	3	35	junction_2	419.266852824727	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTTTCTCTTTCTTGG	NA	False	NA	-38	True	AATAAA	-10	NA	46569688	46539125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46560559_46563125_46563211_46569568
ES.30925.34	chr7	-	1418	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	15	516	-10	121	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGGCTTTTATTAAT	NA	False	NA	-125	True	AATATA	-20	NA	46569702	46539212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.35	chr7	-	3401	13	NNC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-1	31026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1773157377834	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGTAATGCACTGAAAACA	NA	False	NA	NA	False	AAAACA	-5	NA	46608211	46541937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46542097_46574273_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.36	chr7	-	803	7	NNC	ENSMUSG00000014402.16	novel	453	6	NA	NA	8	869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	450.082369004707	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	46569677	46552400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46552586_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.37	chr7	-	3378	5	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	1	15314	1	-741	5prime_fragment	FALSE	canonical	3	1116	junction_1	72.5650570178237	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAAGTGTTGATTCAC	NA	False	NA	NA	False	AATAAA	-13	NA	46569716	46554010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.38	chr7	-	6509	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	76	-1969	11	1969	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCGCTTTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	46608199	46570994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.39	chr7	-	7469	11	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	11	1958	intron_retention	FALSE	canonical	2	49	junction_9	11.4699607671517	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGTTAATATGTCGCT	NA	False	NA	NA	False	NA	NA	NA	46608238	46571005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.4	chr7	-	3323	9	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	10	-265	intron_retention	FALSE	canonical	3	992	junction_2	87.9431634636826	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCAGTTCAGTATTCT	NA	False	NA	48	True	AATAAA	-21	NA	46569707	46539039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.40	chr7	-	4583	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	34	-1	8	1	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTGTCTGATTAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	46608241	46572962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.42	chr7	-	4726	13	NIC	ENSMUSG00000043262.17	novel	4425	13	NA	NA	-14	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	28.0505496084004	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTATCTGCTGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	46608234	46572970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46576237_46577168_46577293_46580736_46580801_46584630_46584789_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.43	chr7	-	4315	1	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	28500	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTATCTGCTGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	46577285	46572970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46573000_46577300
ES.30925.44	chr7	-	4247	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	54	315	-1	8	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAACTTTCATTTTTC	NA	False	NA	0	True	AATAAA	-27	NA	46608221	46573278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.45	chr7	-	5240	11	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-16	-1	intron_retention	FALSE	canonical	2	49	junction_9	11.4699607671517	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATGTGAAAGGAAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	46608291	46573287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.46	chr7	-	3749	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	62	805	-3	-482	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTTAGTTTGACC	NA	False	NA	NA	False	ATTAAA	-17	NA	46608213	46573768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.47	chr7	-	4300	11	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	9	-851	intron_retention	FALSE	canonical	2	49	junction_9	11.4699607671517	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTAGGTGTTTTTCTA	NA	False	NA	NA	False	AGTAAA	-13	NA	46608201	46574137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.48	chr7	-	3376	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	64	1176	-1	-853	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTTAGGTGTTTTTC	NA	False	NA	NA	False	AGTAAA	-11	NA	46608211	46574139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.49	chr7	-	1993	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	76	2547	11	-2224	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCACTGAGATTTCTT	NA	False	NA	NA	False	AATATA	-19	NA	46608199	46575510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.5	chr7	-	1786	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	-180	343	-180	-265	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCAGTTCAGTATTCT	NA	False	NA	48	True	AATAAA	-21	NA	46569897	46539039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.50	chr7	-	1896	11	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	-12	-2230	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	21.231109250343	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTAATTTCCACTGAGA	NA	False	NA	NA	False	AATATA	-13	NA	46608232	46575516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46576237_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.51	chr7	-	1762	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	17	2837	-9	-2514	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACATCTGGCACTTTA	NA	False	NA	NA	False	TTTAAA	-18	NA	46608258	46575800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.52	chr7	-	1251	11	ISM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	85	4212	20	-3889	5prime_fragment	FALSE	canonical	2	49	junction_9	11.4699607671517	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGGTAACTGGTTCTC	NA	False	NA	NA	False	AATAAA	-27	NA	46608190	46577175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ES.30925.53	chr7	-	2034	1	NIC	ENSMUSG00000043262.17	novel	4616	12	NA	NA	23852	-6613	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTTACCACTGAATTA	NA	False	NA	NA	False	NA	NA	NA	46581933	46579899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46579900_46581900
ES.30925.54	chr7	-	2376	2	Genic_Genomic	ENSMUSG00000043262.17	novel	4425	13	NA	NA	20308	-9235	multi-exon	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	46585477	46582521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_46582597_46583176
ES.30925.6	chr7	-	1475	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	10	-265	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	371.517940679738	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCAGTTCAGTATTCT	NA	False	NA	48	True	AATAAA	-21	NA	46569707	46539039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ES.30925.8	chr7	-	1450	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	2	217	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTGGACTTGAGAT	NA	False	NA	-29	True	AATAAA	-19	NA	46569715	46539116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
ES.30926.1	chr7	-	177	1	Intergenic	novelGene_25446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	46610021	46609844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46609800_46610000
ES.30927.1	chr7	+	4350	1	FSM	ENSMUSG00000110416.2	ENSMUST00000209404.2	110	1	-1816	-2424	-1816	2424	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46615179	46619529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46615200_46619500
ES.30928.1	chr7	-	211	1	Intergenic	novelGene_25447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAACTTCTTTGTTTTGT	1498	False	NA	NA	False	NA	NA	NA	46638299	46638088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46638100_46638300
ES.30929.1	chr7	-	5434	7	NNC	ENSMUSG00000049516.10	novel	5223	6	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.979684981625	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTTTCATTTATTGGT	9280	False	NA	0	True	ATTAAA	-20	NA	46658151	46640138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46651722_46651937_46657822
ES.30929.2	chr7	-	5258	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	-35	0	-35	0	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTGGTTTTCATTTA	9237	False	NA	-5	True	ATTAAA	-15	NA	46658194	46640143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ES.30929.3	chr7	-	5002	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	-67	288	-67	-288	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGGTGTGCTGATTAGA	9205	False	NA	NA	False	AATAAA	-27	NA	46658226	46640431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ES.30929.4	chr7	-	4112	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	153	958	-23	-958	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGTCTTCCATTTTG	9425	False	NA	NA	False	ATTAAA	-26	NA	46658006	46641101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ES.30929.5	chr7	-	4154	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	-6	1075	-6	-1075	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGAGGTTGTAATCTC	9266	False	NA	NA	False	ATTAAA	-15	NA	46658165	46641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ES.30929.6	chr7	-	3025	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	0	2198	0	-2198	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGATTGATTGTTGTT	9272	False	NA	NA	False	NA	NA	NA	46658159	46642341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ES.3093.1	chr10	-	893	2	NIC	ENSMUSG00000085456.3	novel	1477	4	NA	NA	33	-1181	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGCCTACTATCAGT	NA	False	NA	NA	False	AGTAAA	-21	NA	73162826	73119272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_73119940_73162600
ES.3093.2	chr10	-	7706	3	NNC	ENSMUSG00000085456.3	novel	692	3	NA	NA	-7	-6132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTTACAAAGATCATGA	NA	False	NA	NA	False	AAAAAG	-4	NA	73162866	73124223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_73131608_73138672_73138729_73162600
ES.3093.3	chr10	-	2879	1	NIC	ENSMUSG00000085456.3	novel	692	3	NA	NA	32	-41857	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	73162827	73159948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_73159900_73162800
ES.30930.1	chr7	+	331	2	NIC	ENSMUSG00000109118.2	novel	334	2	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATACCTGAGTCTGGGG	NA	False	NA	NA	False	AATAAA	-17	NA	46658295	46658758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_46658340_46658471
ES.30931.1	chr7	-	177	1	Intergenic	novelGene_25448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	46685309	46685132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_46685100_46685300
ES.30932.1	chr7	+	168	1	Intergenic	novelGene_25449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTTGACATATGTTA	NA	False	NA	NA	False	NA	NA	NA	46686283	46686451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_46686300_46686500
ES.30933.1	chr7	+	1757	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	41	33	41	-33	multi-exon	FALSE	canonical	3	21	junction_1	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	46700389	46704492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_46700550_46702597_46702863_46703160
ES.30934.1	chr7	-	3997	2	Intergenic	novelGene_25450	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGTGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	47777980	47773924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_47774246_47774304
ES.30935.1	chr7	-	200	1	Intergenic	novelGene_25451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAGAGGAAAATGGAT	NA	False	NA	NA	False	NA	NA	NA	47810529	47810329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_47810300_47810500
ES.30936.1	chr7	-	176	1	Intergenic	novelGene_25452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	48209535	48209359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_48209400_48209500
ES.30937.1	chr7	+	201	1	Intergenic	novelGene_25453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTCCAGTCATTGCCC	NA	False	NA	NA	False	NA	NA	NA	48401423	48401624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_48401400_48401600
ES.30938.1	chr7	+	2421	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	-6	-5	-6	5	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTAATGCTTCACATC	NA	False	NA	14	True	AATAAA	-25	NA	48438744	48477193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.10	chr7	+	2108	1	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	4	-11778	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48438783	48440891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48438800_48440900
ES.30938.12	chr7	+	2231	16	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	92.1082454989177	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48438784	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.13	chr7	+	6392	16	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_5	75.4752645278939	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	8	True	AATAAA	-19	NA	48438791	48477187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454099_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.15	chr7	+	2217	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	13	-148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.427446120303	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGGCTTTTTAAAAATA	NA	False	NA	NA	False	AATAAA	-16	NA	48438792	48477040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461177_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.16	chr7	+	2211	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	51	148	22	-148	multi-exon	FALSE	canonical	3	240	junction_5	25.4348893009189	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGGCTTTTTAAAAATA	NA	False	NA	NA	False	AATAAA	-16	NA	48438801	48477040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.17	chr7	+	2374	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	91.0380886978082	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48438803	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454069_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.18	chr7	+	6360	16	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	24	-6	intron_retention	FALSE	canonical	3	15	junction_3	72.1848245054935	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48438803	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451071_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.20	chr7	+	2311	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	73.1652399965311	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	8	True	AATAAA	-19	NA	48438811	48477187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452700_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.21	chr7	+	2348	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	97.9858886523973	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	8	True	AATAAA	-19	NA	48438815	48477187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458677_48461072_48461182_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.22	chr7	+	3117	16	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	39	0	intron_retention	FALSE	canonical	3	240	junction_5	26.2573587569064	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438818	48477188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.23	chr7	+	5728	14	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	47	-1	intron_retention	FALSE	canonical	3	15	junction_3	76.3707090912517	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	8	True	AATAAA	-19	NA	48438826	48477187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451071_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48466988_48468384_48468469_48472317_48474480_48476616
ES.30938.24	chr7	+	2277	16	ISM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	6895	1	6866	-1	3prime_fragment	FALSE	canonical	3	240	junction_4	26.2678510731274	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGTTTCTAATGCTT	NA	False	NA	8	True	AATAAA	-19	NA	48445645	48477187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.25	chr7	+	4810	1	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	12477	3397	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGGAACTTTAGCTTTC	NA	False	NA	NA	False	AAGAAA	-2	NA	48451256	48456066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48451300_48456100
ES.30938.26	chr7	+	3160	12	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	13935	-6	intron_retention	FALSE	canonical	3	247	junction_3	27.2624222955607	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48452714	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.27	chr7	+	6858	6	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	21593	-6	intron_retention	FALSE	canonical	3	296	junction_4	13.3925352342266	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48460372	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.28	chr7	+	3348	6	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	26171	-5	intron_retention	FALSE	canonical	0	0	junction_5	122.144832064234	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGACTTAGTTTCTAAT	NA	False	NA	4	True	AATAAA	-15	NA	48464950	48477183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48474484_48476616
ES.30938.7	chr7	+	2376	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.427446120303	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTAGTTTCTAATGCT	NA	False	NA	7	True	AATAAA	-18	NA	48438779	48477186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461177_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.8	chr7	+	2407	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.476279165754	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGACTTAGTTTCTAA	NA	False	NA	3	True	AATAAA	-14	NA	48438782	48477182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452630_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458677_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30938.9	chr7	+	2315	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	91.2605944192235	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTTAGTTTCTAATGC	NA	False	NA	6	True	AATAAA	-17	NA	48438783	48477185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455406_48458557_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ES.30939.1	chr7	-	3747	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-55	-1	-55	1	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTTTCATTTGGCCA	NA	False	NA	0	True	ATTAAA	-18	NA	48530844	48516175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.11	chr7	-	3422	12	NIC	ENSMUSG00000046179.18	novel	3499	13	NA	NA	-57	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	46.128458794369	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48531401	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.12	chr7	-	3585	12	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_11	41.1600383907812	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48530808	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530408
ES.30939.13	chr7	-	3645	13	NNC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.491420702694	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48530751	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48518033_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.14	chr7	-	3647	11	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	1	junction_8	44.2587844387981	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48530802	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48527689_48527847_48528172_48528452_48530025
ES.30939.15	chr7	-	3548	13	NNC	ENSMUSG00000046179.18	novel	3499	13	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.2969775743472	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48531430	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48521999_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.17	chr7	-	3649	13	NNC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.491420702694	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48530787	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48518001_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.18	chr7	-	3538	13	NNC	ENSMUSG00000046179.18	novel	3499	13	NA	NA	-93	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	43.6236270080026	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTAACATTTTCATTTGG	NA	False	NA	-3	True	ATTAAA	-15	NA	48531437	48516178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48517988_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.2	chr7	-	3926	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-426	-1	-426	1	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTTTCATTTGGCCA	NA	False	NA	0	True	ATTAAA	-18	NA	48531770	48516175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.20	chr7	-	6811	7	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-2066	-3	intron_retention	FALSE	canonical	3	121	junction_4	15.9626299698877	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTAACATTTTCATTTG	NA	False	NA	-4	True	ATTAAA	-14	NA	48527065	48516179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204
ES.30939.21	chr7	-	4253	12	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	118	junction_11	15.5451887271266	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTTAACATTTTC	NA	False	NA	-9	True	ATTAAA	-9	NA	48530763	48516184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.22	chr7	-	2842	10	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-11	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	48.7801821730865	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTTAACATTTTC	NA	False	NA	-9	True	ATTAAA	-9	NA	48530763	48516184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48517906_48518040_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.23	chr7	-	2578	6	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	1965	-8	intron_retention	FALSE	canonical	3	121	junction_5	8.49470423263812	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTTAACATTTTC	NA	False	NA	-9	True	ATTAAA	-9	NA	48523034	48516184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007
ES.30939.24	chr7	-	3455	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	-17	253	-17	-253	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTTTGACTTACCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	48530806	48516429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.25	chr7	-	3339	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	-94	254	-94	-254	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATGTTTGACTTACCT	NA	False	NA	NA	False	ATTAAA	-16	NA	48531438	48516430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.26	chr7	-	5252	8	NIC	ENSMUSG00000046179.18	novel	3499	13	NA	NA	-55	-2025	intron_retention	FALSE	canonical	3	85	junction_7	25.6148872529159	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	48531399	48518201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.4	chr7	-	3031	12	NNC	ENSMUSG00000046179.18	novel	3499	13	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.0382982576312	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531438	48516176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48518040_48521560_48521649_48521833_48521999_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ES.30939.6	chr7	-	3562	12	NIC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	44.2515349689413	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530793	48516176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_48516978_48517401_48517788_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ES.30939.7	chr7	-	3404	13	NNC	ENSMUSG00000046179.18	novel	3691	13	NA	NA	-487	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.2755511167178	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531831	48516176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531737
ES.30939.8	chr7	-	4202	3	ISM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	9867	1	4077	-1	intron_retention	FALSE	canonical	3	143	junction_2	10	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACATTTTCATTTGGC	NA	False	NA	-2	True	ATTAAA	-16	NA	48520922	48516177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_48516978_48517401_48517788_48517906
ES.3094.1	chr10	-	5214	2	Intergenic	novelGene_2415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAGTAGATAACCAGTA	NA	False	NA	NA	False	NA	NA	NA	74555797	74549018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74549045_74550609
ES.3094.10	chr10	-	3212	2	Intergenic	novelGene_2424	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74555642	74550615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74553756_74555570
ES.3094.11	chr10	-	3437	2	Intergenic	novelGene_2423	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74555211	74550615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74553960_74555118
ES.3094.12	chr10	-	1769	2	Intergenic	novelGene_2422	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74552704	74550615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551462_74551781
ES.3094.13	chr10	-	5066	2	Intergenic	novelGene_2425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74555794	74550615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551735_74551847
ES.3094.14	chr10	-	1139	3	Intergenic	novelGene_2427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	37	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAAGACCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	74555633	74550618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551462_74553522_74553756_74555570
ES.3094.15	chr10	-	1059	3	Intergenic	novelGene_2428	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	37.5	867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGCAGCAAGACCCGTT	NA	False	NA	NA	False	NA	NA	NA	74555156	74550622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551462_74553522_74553705_74555118
ES.3094.16	chr10	-	4608	1	Intergenic	novelGene_2429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTTTTAGTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	74555798	74551190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551200_74555800
ES.3094.17	chr10	-	2979	1	Intergenic	novelGene_2430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	795	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTTAAAGTGATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	74555792	74552813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74552800_74555800
ES.3094.18	chr10	-	901	1	Intergenic	novelGene_2431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	646	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGTAATTCTCATAGG	NA	False	NA	NA	False	NA	NA	NA	74555794	74554893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74554900_74555800
ES.3094.19	chr10	-	133	1	Intergenic	novelGene_2432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	561	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74555847	74555714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74555700_74555800
ES.3094.2	chr10	-	6776	1	Intergenic	novelGene_2414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAGTAGATAACCAGTA	NA	False	NA	NA	False	NA	NA	NA	74555794	74549018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74549000_74555800
ES.3094.3	chr10	-	5259	1	Intergenic	novelGene_2416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGGGTGATTTTGGG	NA	False	NA	NA	False	NA	NA	NA	74555862	74550603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74550600_74555900
ES.3094.4	chr10	-	3104	2	Intergenic	novelGene_2417	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTGTGGGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	74555795	74550606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551651_74553735
ES.3094.5	chr10	-	3124	2	Intergenic	novelGene_2419	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	74555795	74550610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551462_74553522
ES.3094.6	chr10	-	3838	2	Intergenic	novelGene_2420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	74555795	74550610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551756_74553102
ES.3094.7	chr10	-	3530	2	Intergenic	novelGene_2418	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	74555794	74550610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551869_74553522
ES.3094.8	chr10	-	3572	2	Intergenic	novelGene_2421	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	74555795	74550612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74553960_74555570
ES.3094.9	chr10	-	1289	3	Intergenic	novelGene_2426	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	19.5	870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	74555794	74550615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74551448_74553522_74553756_74555570
ES.30940.1	chr7	-	178	1	Intergenic	novelGene_25454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAAAATCCCTAT	NA	False	NA	NA	False	NA	NA	NA	48571292	48571114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_48571100_48571300
ES.30941.1	chr7	+	8299	36	NIC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	-35	330	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	4.85075209821811	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTAAGATTCCACTTGG	NA	False	NA	NA	False	TATAAA	-20	NA	48895901	49256899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48896947_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.10	chr7	+	2096	2	Intergenic	novelGene_25458	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTCTTCTGGAATGT	NA	False	NA	NA	False	NA	NA	NA	49065261	49067652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49067297_49067591
ES.30941.11	chr7	+	6914	31	NNC	ENSMUSG00000052512.18	novel	1495	5	NA	NA	-212	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	4.81306093412036	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGATTCCACTTGGTGC	NA	False	NA	NA	False	TATAAA	-23	NA	49100295	49256902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49100632_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222208_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.12	chr7	+	6910	31	NNC	ENSMUSG00000052512.18	novel	1495	5	NA	NA	-204	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.8848973604593	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAACGTAAGATTCC	NA	False	NA	NA	False	TATAAA	-14	NA	49100303	49256893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49100632_49102146_49103255_49107824_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.13	chr7	+	6877	31	NIC	ENSMUSG00000052512.18	novel	1495	5	NA	NA	-191	323	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	4.61218193724209	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTAAACGTAAGATTC	NA	False	NA	NA	False	TATAAA	-13	NA	49100316	49256892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49100632_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.15	chr7	+	6166	30	NNC	ENSMUSG00000052512.18	novel	890	3	NA	NA	285	320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.52972741342704	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAATTTTAAACGTAAGA	NA	False	NA	NA	False	TATAAA	-10	NA	49100792	49256889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49100856_49102146_49103255_49107843_49107957_49111659_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.16	chr7	+	5685	31	NIC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	2582	326	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	4.76340214552582	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACGTAAGATTCCAC	NA	False	NA	NA	False	TATAAA	-16	NA	49103089	49256895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49103255_49107843_49107957_49111659_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49202587_49202654_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.17	chr7	+	156	1	Intergenic	novelGene_25459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	49105114	49105270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49105100_49105300
ES.30941.18	chr7	+	5288	26	NNC	ENSMUSG00000052512.18	novel	890	3	NA	NA	-29855	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.0523657824825	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTAAACGTAAGATTC	7302	False	NA	NA	False	TATAAA	-13	NA	49168084	49256892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49168648_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222208_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.19	chr7	+	177	1	Intergenic	novelGene_25464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49219951	49220128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49220000_49220100
ES.30941.2	chr7	+	7806	35	NIC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	8	333	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.83391994212982	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGATTCCACTTGGTGC	NA	False	NA	NA	False	TATAAA	-23	NA	48895944	49256902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_48896947_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.20	chr7	+	2554	15	NNC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	-4008	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.06538875756897	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTAAACGTAAGATTC	NA	False	NA	NA	False	TATAAA	-13	NA	49220879	49256892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49220994_49222055_49222208_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.3	chr7	+	1093	1	Intergenic	novelGene_25456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTTGCCAGGGTAGCT	NA	False	NA	NA	False	AAAACA	-31	NA	48945875	48946968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_48945900_48947000
ES.30941.4	chr7	+	7395	36	NNC	ENSMUSG00000052512.18	novel	890	3	NA	NA	-1085	330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.85075209821811	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTAAGATTCCACTTGG	1293	False	NA	NA	False	TATAAA	-20	NA	48992136	49256899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_48992278_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30941.5	chr7	+	2551	2	Genic_Genomic	ENSMUSG00000109051.2	novel	2990	1	NA	NA	1324	1091	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAAGGAAAGAAAA	6322	False	NA	NA	False	NA	NA	NA	48997165	48999922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_48998925_48999130
ES.30941.6	chr7	+	2574	1	FSM	ENSMUSG00000109051.2	ENSMUST00000208060.2	2990	1	1349	-933	1349	933	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGTGTGTGTGTG	6347	False	NA	NA	False	AATAAA	-22	NA	48997190	48999764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_48997200_48999800
ES.30941.7	chr7	+	6884	35	Fusion	ENSMUSG00000052512.18_ENSMUSG00000109051.2	novel	890	3	NA	NA	1351	326	multi-exon	FALSE	canonical	0	0	junction_1	4.83391994212982	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACGTAAGATTCCAC	6349	False	NA	NA	False	TATAAA	-16	NA	48997192	49256895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_48997280_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111656_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ES.30942.1	chr7	-	1059	1	Intergenic	novelGene_25455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAACCCTGTCCTTACCC	NA	False	NA	NA	False	NA	NA	NA	48901970	48900911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_48900900_48902000
ES.30943.1	chr7	-	5747	1	Intergenic	novelGene_25457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTACGTAAAACTGTAAA	NA	False	NA	NA	False	NA	NA	NA	49037160	49031413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49031400_49037200
ES.30944.1	chr7	-	178	1	Intergenic	novelGene_25460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	49118413	49118235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49118200_49118400
ES.30945.1	chr7	-	198	1	Intergenic	novelGene_25461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATAAAATGCATGAAT	NA	False	NA	NA	False	NA	NA	NA	49163038	49162840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49162800_49163000
ES.30946.1	chr7	-	181	1	Intergenic	novelGene_25462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49211018	49210837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49210800_49211000
ES.30947.1	chr7	-	194	1	Intergenic	novelGene_25463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGCTGGTGAGATAGC	NA	False	NA	NA	False	NA	NA	NA	49211621	49211427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49211400_49211600
ES.30948.1	chr7	-	161	1	Intergenic	novelGene_25465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	49238628	49238467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49238500_49238600
ES.30949.1	chr7	+	729	1	ISM	ENSMUSG00000052512.18	ENSMUST00000064395.13	11317	38	363170	0	21942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGGTGGTTTGGCTTCT	NA	False	NA	1	True	AATAAA	-19	NA	49259106	49259835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_49259100_49259800
ES.3095.1	chr10	+	186	1	Intergenic	novelGene_2433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTAAAAAAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	74638625	74638811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_74638600_74638800
ES.30950.1	chr7	-	161	1	Intergenic	novelGene_25466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	49275944	49275783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49275800_49275900
ES.30951.1	chr7	-	250	1	Intergenic	novelGene_25467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAAAATGGCTGACTTCT	NA	False	NA	NA	False	AAGAAA	-45	NA	49280101	49279851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49279900_49280100
ES.30952.1	chr7	+	2177	4	Intergenic	novelGene_25468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGATCTATATAGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49289007	49297311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49289130_49289526_49289643_49294767_49294987_49295591
ES.30953.1	chr7	+	186	1	Intergenic	novelGene_25469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACATGGACT	NA	False	NA	NA	False	NA	NA	NA	49326073	49326259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49326100_49326300
ES.30954.1	chr7	+	156	1	Intergenic	novelGene_25470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4907	False	NA	NA	False	NA	NA	NA	49369904	49370060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49369900_49370100
ES.30955.1	chr7	+	253	1	Intergenic	novelGene_25471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAGCATTGCTAACA	682	False	NA	NA	False	NA	NA	NA	49372927	49373180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49372900_49373200
ES.30956.1	chr7	+	1018	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	-44	364	-6	-364	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTGCTTCTCCT	9874	False	NA	3	True	TATAAA	-17	NA	49408856	49423359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.10	chr7	+	3468	22	Fusion	ENSMUSG00000030505.18_ENSMUSG00000039745.9	novel	2507	16	NA	NA	5	2	multi-exon	FALSE	canonical	2	2	junction_6	188.404483580159	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATGTTTTCATGAAGT	9899	False	NA	46	True	AATAAA	-30	NA	49408881	49508015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048_49423188_49427955_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.11	chr7	+	3879	20	Fusion	ENSMUSG00000030505.18_ENSMUSG00000039745.9_ENSMUSG00000109154.2	novel	1338	6	NA	NA	11	-16	intron_retention	FALSE	canonical	0	0	junction_6	195.566922184278	472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGCTTCTGCATCACAC	9905	False	NA	28	True	AATAAA	-12	NA	49408887	49507997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048_49423188_49428328_49428462_49430056_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.12	chr7	+	1250	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	7	-367	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTTGTGGTGTGCTTCT	9925	False	NA	0	True	TATAAA	-14	NA	49408907	49423356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.13	chr7	+	1526	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	7	-195	7	195	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTTTAGTTTTTCAT	9925	False	NA	NA	False	TATAAA	-16	NA	49408907	49423918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.14	chr7	+	12500	3	NNC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	36	15	intron_retention	FALSE	non_canonical	0	0	junction_2	115	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCCTGTGTGTTGTTC	9954	False	NA	10	True	AATAAA	-10	NA	49408936	49423738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49409542_49411807_49419645_49419680
ES.30956.15	chr7	+	930	4	NNC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	5028	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.387350613187	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCCTGTGTGTTGTTC	NA	False	NA	10	True	AATAAA	-10	NA	49413928	49423738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49413969_49420557_49420696_49422323_49422386_49423048
ES.30956.16	chr7	+	5151	3	NNC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	7641	-367	intron_retention	FALSE	non_canonical	0	0	junction_1	118.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTTGTGGTGTGCTTCT	NA	False	NA	0	True	TATAAA	-14	NA	49416541	49423356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49419645_49419680_49420696_49422323
ES.30956.17	chr7	+	1483	4	NNC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	10644	-369	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.387350613187	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCCTTTGTGGTGTGCTT	NA	False	NA	-2	True	TATAAA	-12	NA	49419544	49423354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49419645_49419680_49420696_49422323_49422386_49423048
ES.30956.19	chr7	+	2262	13	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	-3	-12	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	170.723623308421	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTCTGCATCACACTGAA	NA	False	NA	32	True	AATAAA	-16	NA	49428090	49508001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.2	chr7	+	3306	22	Fusion	ENSMUSG00000030505.18_ENSMUSG00000039745.9	novel	2507	16	NA	NA	3	-14	multi-exon	FALSE	non_canonical	0	0	junction_18	217.549879598631	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	9883	False	NA	30	True	AATAAA	-14	NA	49408865	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048_49423188_49427955_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478687_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.20	chr7	+	2374	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	-3	-14	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	161.513568015388	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428090	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.21	chr7	+	4157	14	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	242.342146512594	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCTGCATCACACT	NA	False	NA	29	True	AATAAA	-13	NA	49428090	49507998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49476455_49477131_49477354_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.22	chr7	+	5506	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	0	-2999	0	2999	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTGATTATTGAAATT	NA	False	NA	NA	False	AATAAA	-23	NA	49428093	49511012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.23	chr7	+	4150	15	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	242.749566510048	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	33	True	AATAAA	-17	NA	49428093	49508002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49456274_49456375_49467779_49467859_49476455_49477131_49477354_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.24	chr7	+	2268	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	3	-14	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	164.362422460731	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428096	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.25	chr7	+	3469	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	3	-965	3	965	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTAGCCCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	49428096	49508978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.26	chr7	+	3213	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	12	-11	intron_retention	FALSE	canonical	3	379	junction_1	70.9261256951375	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	33	True	AATAAA	-17	NA	49428105	49508002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.27	chr7	+	5441	16	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	14	2996	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	155.061650821715	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCATGTGATTATTGAA	NA	False	NA	NA	False	AATAAA	-20	NA	49428107	49511009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.28	chr7	+	1526	7	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	15	70177	15	-55	5prime_fragment	FALSE	canonical	3	379	junction_1	78.0939605005833	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTAGATGCTACCTTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	49428108	49437836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980
ES.30956.29	chr7	+	2339	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	15	-14	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	162.028962273368	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428108	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49507114
ES.30956.3	chr7	+	1220	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	5	15	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCCTGTGTGTTGTTC	9885	False	NA	10	True	AATAAA	-10	NA	49408867	49423738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.30	chr7	+	4231	15	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	15	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	206.216895920934	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCACACTGAATGTTTT	NA	False	NA	38	True	AATAAA	-22	NA	49428108	49508007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49476455_49477131_49477354_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.31	chr7	+	2982	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	16	-491	16	491	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATCCCTCTTGCCA	NA	False	NA	NA	False	TTTAAA	-13	NA	49428109	49508504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.32	chr7	+	2426	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	16	-14	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	157.585885232434	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428109	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498484_49498573_49507114
ES.30956.33	chr7	+	2049	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	16	442	16	-442	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTTGTTTTTAATA	NA	False	NA	NA	False	AATATA	-17	NA	49428109	49507571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.34	chr7	+	4304	16	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	16	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	157.805984959028	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	33	True	AATAAA	-17	NA	49428109	49508002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49477131_49477354_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.35	chr7	+	5515	16	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	16	2999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	156.867247484404	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTGATTATTGAAATT	NA	False	NA	NA	False	AATAAA	-23	NA	49428109	49511012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498459_49498573_49507114
ES.30956.36	chr7	+	2388	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	22	-14	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	160.587140182011	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428115	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.37	chr7	+	4293	16	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	22	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	205.134384137705	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTGCATCACACTGA	NA	False	NA	31	True	AATAAA	-15	NA	49428115	49508000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428466_49430063_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49477131_49477354_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.38	chr7	+	5095	16	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	24	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	158.193496143875	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGCATCACACTGAAT	NA	False	NA	33	True	AATAAA	-17	NA	49428117	49508002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49445430_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.4	chr7	+	1455	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-6	197	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTAGTTTTTCATTT	9888	False	NA	NA	False	TATAAA	-18	NA	49408870	49423920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.41	chr7	+	2456	16	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	34	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	157.805984959028	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428127	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476648_49478698_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.43	chr7	+	5232	13	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	34	2995	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	170.723623308421	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCATGTGATTATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	49428127	49511008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.45	chr7	+	5328	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	-37	2997	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	161.513568015388	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATGTGATTATTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	49428147	49511010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.46	chr7	+	2338	16	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	14	-14	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	155.061650821715	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428200	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.47	chr7	+	2338	15	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	234	14	36	-14	3prime_fragment	FALSE	canonical	3	505	junction_7	46.9900662537372	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49428327	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.48	chr7	+	4770	11	ISM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	4919	14	-936	-14	3prime_fragment	FALSE	canonical	3	505	junction_3	52.4457815272115	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTGCATCACACTG	NA	False	NA	30	True	AATAAA	-14	NA	49433012	49507999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ES.30956.49	chr7	+	4412	6	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	8163	2997	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	241.915687792255	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATGTGATTATTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	49456300	49511010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498484_49498573_49507114
ES.30956.5	chr7	+	1385	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	-30	-17	-6	17	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTGTGTTGTTCTA	9888	False	NA	12	True	AATAAA	-12	NA	49408870	49423740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.50	chr7	+	1522	8	NNC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	8194	17137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	314.432757809477	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	49456331	49525150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49456375_49467779_49467859_49476455_49476644_49478682_49478779_49498242_49498294_49498484_49498573_49523068_49523426_49524530
ES.30956.51	chr7	+	5533	2	Intergenic	novelGene_25472	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGGGGACAGTCGAG	NA	False	NA	NA	False	NA	NA	NA	49499944	49505564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49503033_49503119
ES.30956.52	chr7	+	182	1	Intergenic	novelGene_25473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGACCCTTCTCGG	NA	False	NA	NA	False	NA	NA	NA	49501386	49501568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49501400_49501600
ES.30956.53	chr7	+	3508	1	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	56353	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCTGCATCACACT	NA	False	NA	29	True	AATAAA	-13	NA	49504490	49507998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49504500_49508000
ES.30956.54	chr7	+	6478	1	Genic_Genomic	ENSMUSG00000030505.18	novel	NA	NA	NA	NA	56390	2992	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGAATTCATGTGATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	49504527	49511005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_49504500_49511000
ES.30956.55	chr7	+	185	1	Intergenic	novelGene_25474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTAGTGTTG	19	False	NA	NA	False	NA	NA	NA	49517387	49517572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49517400_49517600
ES.30956.56	chr7	+	3594	1	Intergenic	novelGene_25475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTCATGA	4188	False	NA	NA	False	NA	NA	NA	49521556	49525150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_49521600_49525200
ES.30956.6	chr7	+	957	7	NNC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	-4	17	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	113.123334855762	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGTGTGTTGTTCTA	9890	False	NA	12	True	AATAAA	-12	NA	49408872	49423740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048_49423188_49423503
ES.30956.7	chr7	+	1070	7	NNC	ENSMUSG00000039745.9	novel	1338	6	NA	NA	1	25	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	95.5539405548277	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTTCTAGTTGCTAA	9895	False	NA	20	True	AATAAA	-20	NA	49408877	49423748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048_49423188_49423503
ES.30956.8	chr7	+	1669	5	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	2	23	intron_retention	FALSE	canonical	3	230	junction_1	21.9928965804871	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTTCTAGTTGCT	9896	False	NA	18	True	AATAAA	-18	NA	49408878	49423746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30956.9	chr7	+	1439	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	2	-23	2	23	multi-exon	TRUE	canonical	3	12	junction_1	99.2685247195706	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGTTCTAGTTGCT	9896	False	NA	18	True	AATAAA	-18	NA	49408878	49423746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ES.30957.1	chr7	-	163	1	Intergenic	novelGene_25476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAAAGTCCAATG	NA	False	NA	NA	False	NA	NA	NA	49645950	49645787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_49645800_49646000
ES.30958.1	chr7	-	3023	2	Genic_Genomic	ENSMUSG00000109494.2	novel	2608	1	NA	NA	-4441	149	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTTTACCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	50614838	50607640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_50610504_50614678
ES.30959.1	chr7	+	2994	3	NNC	ENSMUSG00000108963.2	novel	5084	2	NA	NA	-8698	-3259	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGTTTTCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	50811566	50823026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_50811737_50820159_50822424_50822466
ES.3096.1	chr10	+	174	1	Intergenic	novelGene_2434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGGAAGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	74766155	74766329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_74766200_74766300
ES.30960.1	chr7	-	165	1	Intergenic	novelGene_25477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	51229207	51229042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_51229000_51229200
ES.30961.1	chr7	-	170	1	Intergenic	novelGene_25478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	51293215	51293045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_51293000_51293200
ES.30962.1	chr7	+	1280	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-21	-27	-21	27	mono-exon	FALSE	NA	NA	NA	NA	NA	803	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCTCAGTAGTTAAAAGA	NA	False	NA	NA	False	AATAAA	-41	NA	51396373	51397653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_51396400_51397700
ES.30962.2	chr7	+	1093	2	Genic_Genomic	ENSMUSG00000078636.5	novel	1232	1	NA	NA	-20	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	51396374	51397628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_51396568_51396728
ES.30962.3	chr7	+	1239	2	Genic_Genomic	ENSMUSG00000078636.5	novel	1232	1	NA	NA	-19	27	multi-exon	FALSE	non_canonical	0	0	junction_1	0	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCTCAGTAGTTAAAAGA	NA	False	NA	NA	False	AATAAA	-41	NA	51396375	51397653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_51396925_51396963
ES.30963.1	chr7	+	2951	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-169	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATTTCCCAGCAATAT	436	False	NA	62	True	AATAAA	-16	NA	51511593	51644262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.10	chr7	+	3399	10	NNC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7727266587587	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACATTATTTGTCTCTG	608	False	NA	2	True	ATTAAA	-19	NA	51511765	51644202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51513074_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.12	chr7	+	2740	10	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	4	-28	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	26.6407281255924	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	609	False	NA	-27	True	AATAAA	-27	NA	51511766	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51617405_51617553_51643038
ES.30963.13	chr7	+	3511	10	NNC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.4993224820291	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTATTTGTCTCTGTA	610	False	NA	4	True	ATTAAA	-21	NA	51511767	51644204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51513186_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.14	chr7	+	2474	11	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	5	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.477348809879	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	610	False	NA	-27	True	AATAAA	-27	NA	51511767	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512099_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51572272_51572354_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.15	chr7	+	2982	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	5	41	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	19.2142525225417	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGTCTCCTGTGTCTC	610	False	NA	NA	False	ATTAAA	-43	NA	51511767	51644764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512193_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.16	chr7	+	2802	10	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	6	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	26.944387170615	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	611	False	NA	-27	True	AATAAA	-27	NA	51511768	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546054_51546266_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.17	chr7	+	2478	10	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	14	-28	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.956124713487	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	619	False	NA	-27	True	AATAAA	-27	NA	51511776	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512193_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.18	chr7	+	3508	9	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-53	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8202875820676	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTGTCTCCTGTGTCT	964	False	NA	NA	False	ATTAAA	-42	NA	51512121	51644763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51513074_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.19	chr7	+	3236	11	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-52	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6622655911513	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCCCAGCAATATGA	965	False	NA	64	True	AATAAA	-18	NA	51512122	51644264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51513074_51513248_51513396_51514029_51514118_51520144_51520226_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.2	chr7	+	3502	11	NNC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-168	5488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	21.4485430740645	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAACAAAACAAAAGAAAAA	437	False	NA	NA	False	NA	NA	NA	51511594	51650211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038_51644766_51650162
ES.30963.20	chr7	+	1344	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-48	-917	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCTGTGTCCATTCTT	969	False	NA	NA	False	ATTAAA	-31	NA	51512126	51643284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.21	chr7	+	2920	10	NIC	ENSMUSG00000030498.16	novel	1857	10	NA	NA	-48	41	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.8980071581387	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGTCTCCTGTGTCTC	969	False	NA	NA	False	ATTAAA	-43	NA	51512126	51644764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512394_51513745_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.22	chr7	+	2713	9	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	14	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.6510093634777	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTCCTGTGTCTCAA	NA	False	NA	NA	False	ATTAAA	-45	NA	51537679	51644766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51537825_51546998_51547121_51576150_51576293_51586072_51586188_51586301_51586366_51593397_51593540_51602941_51603050_51617405_51617553_51643038
ES.30963.3	chr7	+	2787	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-162	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	15.4008928312614	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	443	False	NA	1	True	ATTAAA	-18	NA	51511600	51644201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512394_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.4	chr7	+	2547	9	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	17.9356488591854	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTTCCCAGCAATATG	450	False	NA	63	True	AATAAA	-17	NA	51511607	51644263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512099_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.5	chr7	+	4219	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-142	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	10.7927927340425	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTATTTGTCTCTGTAT	463	False	NA	5	True	ATTAAA	-22	NA	51511620	51644205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51513842_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.6	chr7	+	2660	10	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-141	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.8317797177451	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	464	False	NA	-27	True	AATAAA	-27	NA	51511621	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512193_51513745_51513842_51514029_51514118_51537632_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.7	chr7	+	4529	8	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-135	94	intron_retention	FALSE	canonical	3	9	junction_1	19.1673617146972	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGGAATACAGCTTTGT	470	False	NA	NA	False	ATTAAA	-19	NA	51511627	51606276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51512099_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941
ES.30963.8	chr7	+	2439	9	NIC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	19.2142525225417	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACACATTATTTGTCTCT	590	False	NA	1	True	ATTAAA	-18	NA	51511747	51644201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_51512193_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30963.9	chr7	+	3393	9	NNC	ENSMUSG00000030498.16	novel	3158	10	NA	NA	-4	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8202875820676	79	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAAAAACAAAGTT	601	False	NA	-27	True	AATAAA	-27	NA	51511758	51644173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_51513186_51514029_51514118_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ES.30964.1	chr7	-	4724	2	Genic_Genomic	ENSMUSG00000092118.2	novel	1691	1	NA	NA	-3	3628	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTTAGCAGATGGG	NA	False	NA	NA	False	AATAGA	-12	NA	51512018	51506696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_51508554_51509151
ES.30964.2	chr7	-	3046	2	Genic_Genomic	ENSMUSG00000092118.2	novel	1691	1	NA	NA	1	1954	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTGACCTCCT	NA	False	NA	NA	False	TATAAA	-18	NA	51512014	51508370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_51508554_51509151
ES.30964.3	chr7	-	2183	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	-20	-472	-20	472	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCCAGGGTTCAACAC	NA	False	NA	NA	False	AATAAA	-26	NA	51512035	51509852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51509900_51512000
ES.30964.4	chr7	-	1704	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	-17	4	-17	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTGTTCTTTGTACA	NA	False	NA	0	True	ATTAAA	-15	NA	51512032	51510328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51510300_51512000
ES.30964.5	chr7	-	1298	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	-2	395	-2	-395	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGTATTATATAGAGAT	NA	False	NA	NA	False	NA	NA	NA	51512017	51510719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51510700_51512000
ES.30965.1	chr7	-	4328	1	Genic_Genomic	ENSMUSG00000074093.5	novel	NA	NA	NA	NA	7757	3557	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCCTGTCTGCTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	51647689	51643361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_51643400_51647700
ES.30965.2	chr7	-	2953	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	113	-13	-57	13	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCACGTGCCTGCCTCC	NA	False	NA	-6	True	AATAAA	-30	NA	51655653	51646905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ES.30965.3	chr7	-	2904	4	NNC	ENSMUSG00000074093.5	novel	3053	4	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.6188571424762	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGGCAAGAGTTAGATG	NA	False	NA	-21	True	AATAAA	-15	NA	51655577	51646920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_51649526_51653093_51653208_51653640_51653734_51655485
ES.30965.4	chr7	-	2796	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	164	93	-6	-93	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTTATTTTCATTGTT	NA	False	NA	-112	True	CATAAA	-36	NA	51655602	51647011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ES.30965.5	chr7	-	2564	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	157	332	-13	-332	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATTGTGACTTGTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	51655609	51647250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ES.30965.6	chr7	-	439	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	175	2439	5	2	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTGGTAATATTTT	NA	False	NA	NA	False	AATATA	-11	NA	51655591	51649357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ES.30966.1	chr7	+	173	1	Intergenic	novelGene_25479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	52405660	52405833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_52405700_52405800
ES.30967.1	chr7	-	289	1	FSM	ENSMUSG00000099647.2	ENSMUST00000122119.2	321	1	279	-247	279	247	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	54061947	54061658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_54061700_54061900
ES.30968.1	chr7	-	6471	2	Antisense	novelGene_ENSMUSG00000063297.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54790727	54783902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_54789976_54790329
ES.30969.1	chr7	+	177	1	Intergenic	novelGene_25480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGGAAAAAAAAGCTGAAT	NA	False	NA	NA	False	NA	NA	NA	55404084	55404261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_55404100_55404300
ES.3097.1	chr10	+	2634	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	-113	998	-113	-989	multi-exon	TRUE	canonical	3	7	junction_1	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACACAGGATAATTAGT	NA	False	NA	NA	False	NA	NA	NA	74802895	74851741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
ES.3097.2	chr10	+	2464	3	NIC	ENSMUSG00000040009.7	novel	3519	4	NA	NA	-8	-988	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACACAGGATAATTAGTG	NA	False	NA	NA	False	NA	NA	NA	74803000	74851742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_74803215_74826765_74827973_74850699
ES.3097.3	chr10	+	3474	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	39	6	7	3	multi-exon	FALSE	canonical	3	7	junction_1	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAACTCTGTCCCTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	74803047	74852733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
ES.30970.1	chr7	+	3703	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	-17	219	-17	12	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGTATTTCTTAG	NA	False	NA	27	True	AATAAA	-30	NA	55443884	55481206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.10	chr7	+	3612	23	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	20.6189353718316	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTCTACCTATTTCA	NA	False	NA	13	True	AATAAA	-16	NA	55443914	55481192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.11	chr7	+	3544	18	NNC	ENSMUSG00000033790.12	novel	4120	22	NA	NA	1	3609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	28.7995097997498	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55443916	55472397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466906_55466986_55467176_55468461_55468645_55471526_55471612_55471725
ES.30970.12	chr7	+	3426	23	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	22.0555740598026	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTTTCTACCTATTT	NA	False	NA	11	True	AATAAA	-14	NA	55443920	55481190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464699_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.13	chr7	+	5489	21	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	9	junction_6	21.4079424513427	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACCTATTTCAT	NA	False	NA	14	True	AATAAA	-17	NA	55443929	55481193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.14	chr7	+	3957	22	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_11	29.610701626163	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTCTACCTATTTCA	NA	False	NA	13	True	AATAAA	-16	NA	55443934	55481192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55456578_55458258_55458462_55463180_55463293_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.15	chr7	+	4105	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	25	8298	-1	-239	intron_retention	FALSE	canonical	3	83	junction_7	5.82384407099929	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAGAAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	55443937	55468549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
ES.30970.16	chr7	+	2336	14	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	25	10067	-1	-744	5prime_fragment	FALSE	canonical	3	83	junction_7	5.82384407099929	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGTGTATAGCACTAATGA	NA	False	NA	NA	False	AATAAA	-20	NA	55443937	55466780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205
ES.30970.18	chr7	+	1517	11	NNC	ENSMUSG00000033790.12	novel	3735	21	NA	NA	9	-1288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.4914022118954	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACGAGTATGTGGTTTT	NA	False	NA	NA	False	ACTAAA	-36	NA	55443947	55457404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55457050
ES.30970.19	chr7	+	1835	13	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	38	11884	12	-2561	5prime_fragment	FALSE	canonical	3	83	junction_7	5.69356361751291	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTGTGTCAGTAG	NA	False	NA	NA	False	AATACA	-9	NA	55443950	55464963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607
ES.30970.2	chr7	+	2429	13	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-27	11355	-16	-2032	5prime_fragment	FALSE	canonical	3	83	junction_7	5.69356361751291	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCTTAAACATTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	55443885	55465492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607
ES.30970.20	chr7	+	4055	22	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	13	-5	intron_retention	FALSE	canonical	3	52	junction_18	14.0254061666887	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATTTTTCTACCTATT	NA	False	NA	10	True	AATAAA	-13	NA	55443951	55481189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.21	chr7	+	6622	22	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	16	-1	intron_retention	FALSE	canonical	2	2	junction_20	22.0540461680153	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTTTTACATTTCCTC	NA	False	NA	5	True	NA	NA	NA	55443954	55480984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55478845_55479078_55479180_55480589
ES.30970.23	chr7	+	3631	24	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	29.7904464456794	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTCTACCTATTTCA	NA	False	NA	13	True	AATAAA	-16	NA	55443954	55481192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55478765_55478845_55479078_55479180_55480589
ES.30970.25	chr7	+	3537	23	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	20.4636848268882	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTACCTATTTCATGT	NA	False	NA	16	True	AATAAA	-19	NA	55443972	55481195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.26	chr7	+	3390	22	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	21.6851308033681	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTCTACCTATTTCA	NA	False	NA	13	True	AATAAA	-16	NA	55443980	55481192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.27	chr7	+	3336	23	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	20.6189353718316	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAAGTTTTACATTTCC	NA	False	NA	3	True	NA	NA	NA	55443980	55480982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.29	chr7	+	2436	18	NNC	ENSMUSG00000033790.12	novel	3735	21	NA	NA	12	3050	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	21.103304977393	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTGGTAAGACTTGAT	NA	False	NA	-39	True	AATAAA	-31	NA	55443984	55471838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725
ES.30970.30	chr7	+	3701	22	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	12	-3	intron_retention	FALSE	canonical	2	9	junction_6	25.5929234833831	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAAGTTTTACATTTCC	NA	False	NA	3	True	NA	NA	NA	55443984	55480982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450446_55454328_55454444_55455042_55455133_55455800_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.32	chr7	+	3788	20	NNC	ENSMUSG00000033790.12	novel	931	7	NA	NA	3910	-1	intron_retention	FALSE	canonical	0	0	junction_1	27.3745944454458	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACCTATTTCAT	NA	False	NA	14	True	AATAAA	-17	NA	55447882	55481193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55447959_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.33	chr7	+	1935	8	NNC	ENSMUSG00000033790.12	novel	3735	21	NA	NA	-40	-342	intron_retention	FALSE	canonical	0	0	junction_7	33.0083477382338	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAATAAGAA	NA	False	NA	NA	False	NA	NA	NA	55454326	55467182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464699_55466205
ES.30970.34	chr7	+	6561	10	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-3980	0	intron_retention	FALSE	canonical	3	52	junction_6	12.4225998749988	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTACCTATTTCATG	NA	False	NA	15	True	AATAAA	-18	NA	55463092	55481194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55463297_55464607_55466405_55466986_55467176_55468461_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.35	chr7	+	4561	6	NIC	ENSMUSG00000033790.12	novel	3735	21	NA	NA	-3826	3641	intron_retention	FALSE	canonical	3	67	junction_4	11.2178429299041	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATCCCCAACTACAAGAA	NA	False	NA	NA	False	NA	NA	NA	55463246	55472429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55471612_55471725
ES.30970.36	chr7	+	6037	1	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-680	3641	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATCCCCAACTACAAGAA	NA	False	NA	NA	False	NA	NA	NA	55466392	55472429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55466400_55472400
ES.30970.37	chr7	+	4441	2	ISM	ENSMUSG00000033790.12	ENSMUST00000205311.2	931	7	-3516	8254	802	3641	5prime_fragment	FALSE	canonical	3	72	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGATCCCCAACTACAAGAA	NA	False	NA	NA	False	NA	NA	NA	55467874	55472429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55471612_55471725
ES.30970.38	chr7	+	179	1	Intergenic	novelGene_25481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGTGAATG	NA	False	NA	NA	False	NA	NA	NA	55470212	55470391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_55470200_55470400
ES.30970.39	chr7	+	1279	4	ISM	ENSMUSG00000033790.12	ENSMUST00000205311.2	931	7	350	3835	350	1	internal_fragment	FALSE	canonical	3	52	junction_2	7.36357401145817	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAACATCTCCAGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	55471740	55476848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55471847_55473267_55473447_55475327_55475454_55475980
ES.30970.4	chr7	+	2605	18	ISM	ENSMUSG00000033790.12	ENSMUST00000206789.2	3735	21	-9	4968	2	3091	5prime_fragment	FALSE	canonical	3	67	junction_15	9.6774986044305	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCCTGGAAAGTTT	NA	False	NA	2	True	AATAAA	-13	NA	55443903	55471879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725
ES.30970.40	chr7	+	1463	3	ISM	ENSMUSG00000033790.12	ENSMUST00000206191.2	4120	22	31190	207	-923	2	3prime_fragment	FALSE	canonical	3	66	junction_1	4.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACATTTCCTCTTA	NA	False	NA	8	True	NA	NA	NA	55475105	55480987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55476070_55479078_55479180_55480589
ES.30970.41	chr7	+	3605	2	ISM	ENSMUSG00000033790.12	ENSMUST00000205311.2	931	7	4789	-511	151	0	3prime_fragment	FALSE	canonical	3	75	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTACCTATTTCATG	NA	False	NA	15	True	AATAAA	-18	NA	55476179	55481194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55479180_55480589
ES.30970.5	chr7	+	3467	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	2	436	2	4	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACATTTCCTCTTACC	NA	False	NA	10	True	NA	NA	NA	55443903	55480989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.6	chr7	+	10198	19	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	4	-1	intron_retention	FALSE	canonical	2	9	junction_13	20.8792087499668	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACCTATTTCAT	NA	False	NA	14	True	AATAAA	-17	NA	55443905	55481193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55471612_55471725_55471847_55473267_55476070_55479078_55479180_55480589
ES.30970.7	chr7	+	1967	11	NNC	ENSMUSG00000033790.12	novel	3735	21	NA	NA	5	-879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	28.4914022118954	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTCTTCCCATATAC	NA	False	NA	NA	False	ATTAAA	-23	NA	55443906	55457813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55457050
ES.30970.8	chr7	+	3334	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	5	566	5	-126	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGACTACTAATATTTCT	NA	False	NA	NA	False	TATAAA	-1	NA	55443906	55480859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30970.9	chr7	+	4994	22	NIC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	52	junction_18	14.0169964855596	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTCTACCTATTTCA	NA	False	NA	13	True	AATAAA	-16	NA	55443908	55481192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ES.30971.1	chr7	+	4648	31	NIC	ENSMUSG00000030447.16	novel	2908	24	NA	NA	-25	202	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	114.098183839865	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55491467	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55491815_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.10	chr7	+	5484	31	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	67	-1	intron_retention	FALSE	canonical	1	23	junction_14	147.688294127267	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACCAGTTTCTTTTA	NA	False	NA	4	True	NA	NA	NA	55491886	55580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.11	chr7	+	4582	32	NIC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	-35	198	combination_of_known_junctions	FALSE	canonical	1	23	junction_15	145.377230066652	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55491918	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.12	chr7	+	4307	30	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-12	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.638719480677	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491941	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521610_55521725_55521814_55521905_55523193_55523272_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.14	chr7	+	4343	32	NIC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	23	junction_15	145.377230066652	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55491957	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.15	chr7	+	6332	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	139	-31	4	31	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTCATTAGTGCAT	NA	False	NA	NA	False	AATAAA	-17	NA	55491957	55582381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.16	chr7	+	4157	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	115.213622844214	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55491959	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546528_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.2	chr7	+	4407	31	NIC	ENSMUSG00000030447.16	novel	2908	24	NA	NA	18	4	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	114.098183839865	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTCTTTTAAATTT	NA	False	NA	9	True	NA	NA	NA	55491510	55580250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55491815_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.21	chr7	+	4176	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	19	0	19	0	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACCAGTTTCTTTTAA	NA	False	NA	5	True	NA	NA	NA	55491972	55580246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.23	chr7	+	5323	30	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	161	2619	-18	-488	5prime_fragment	FALSE	canonical	3	493	junction_19	47.1970343089735	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTAATTGTAGCCATTG	NA	False	NA	NA	False	AATAAA	-11	NA	55491979	55579731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934
ES.30971.25	chr7	+	5531	31	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-17	200	intron_retention	FALSE	canonical	1	28	junction_15	110.634458164413	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491980	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55547721_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.27	chr7	+	4337	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-16	200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	115.213622844214	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491981	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546528_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.29	chr7	+	4034	30	NIC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	113.71044019471	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55491991	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.3	chr7	+	4582	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	-43	1901	-43	203	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTGTTCATTGGCAT	NA	False	NA	14	True	AATAAA	-17	NA	55491775	55580449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.30	chr7	+	4351	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-6	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	114.827213189596	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55491991	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574869_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.31	chr7	+	4297	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-6	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	112.370221440854	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55491991	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577998_55578083_55579745
ES.30971.33	chr7	+	4126	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	115.31507080844	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAATAAAAAAA	NA	False	NA	-25	True	NA	NA	NA	55491992	55580216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557181_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.34	chr7	+	1997	15	ISM	ENSMUSG00000030447.16	ENSMUST00000173497.8	3849	28	-4	28711	-4	-3765	5prime_fragment	FALSE	canonical	3	511	junction_11	43.5674471248843	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTATGCTGTTTCCTTTT	NA	False	NA	NA	False	AATATA	-16	NA	55491993	55546823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415
ES.30971.36	chr7	+	3978	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	175	2287	-4	-156	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATATGCCTTTGGAATT	NA	False	NA	NA	False	TATAAA	-26	NA	55491993	55580063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.38	chr7	+	4670	29	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	176	4917	-3	1899	5prime_fragment	FALSE	canonical	3	493	junction_19	41.9668692213858	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCAGCCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	55491994	55577433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035
ES.30971.39	chr7	+	1616	12	ISM	ENSMUSG00000030447.16	ENSMUST00000173497.8	3849	28	-1	33352	-1	3	5prime_fragment	FALSE	canonical	3	511	junction_11	47.9228029368307	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTCAACTATAAATTG	NA	False	NA	NA	False	AATAAA	-19	NA	55491996	55542182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736
ES.30971.4	chr7	+	4131	31	NIC	ENSMUSG00000030447.16	novel	2908	24	NA	NA	-43	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	176.614570935319	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACCAGTTTCTTTTA	NA	False	NA	4	True	NA	NA	NA	55491775	55580245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55491815_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.44	chr7	+	4446	32	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.474281171424	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55492025	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55499129_55499474_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.45	chr7	+	4310	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	23	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	115.38438658097	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55492025	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578080_55579761
ES.30971.46	chr7	+	4285	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	23	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	115.388816134359	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55492025	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557108_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.47	chr7	+	4379	32	FSM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	27	-228	27	201	multi-exon	FALSE	canonical	1	1	junction_2	151.121606179654	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCGTTTGTTCATTGGC	NA	False	NA	12	True	AATAAA	-15	NA	55492029	55580447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55503749_55503803_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.5	chr7	+	4556	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	-160	-201	-25	201	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCGTTTGTTCATTGGC	NA	False	NA	12	True	AATAAA	-15	NA	55491793	55580447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.50	chr7	+	4268	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	28	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	114.827213189596	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55492030	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574181_55574903_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.52	chr7	+	4309	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	29	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	152.468299073028	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55492031	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550166_55550252_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.53	chr7	+	4127	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	115.38334657422	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55492031	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537563_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.54	chr7	+	4801	33	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	29	200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.361981441733	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55492031	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55498459_55498701_55499129_55499367_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.55	chr7	+	4241	32	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.474281171424	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55492031	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55499129_55499250_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.56	chr7	+	4094	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	115.366705191171	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCTACCAGTTTCTTT	NA	False	NA	2	True	NA	NA	NA	55492031	55580243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573648_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.57	chr7	+	3963	30	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	156.115044929276	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55492031	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541740_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.58	chr7	+	4088	31	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	114.932076559254	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55492033	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574949_55576035_55576275_55577934_55578083_55579745
ES.30971.59	chr7	+	7266	29	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	31	200	intron_retention	FALSE	canonical	3	493	junction_17	48.1095025404948	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55492033	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.6	chr7	+	4360	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	-18	2098	-18	6	multi-exon	FALSE	canonical	3	493	junction_19	46.6292707308284	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTTCTTTTAAATTTAA	NA	False	NA	11	True	NA	NA	NA	55491800	55580252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.60	chr7	+	4220	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	31	180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	112.370221440854	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATTAATGGAGTC	NA	False	NA	-9	True	NA	NA	NA	55492033	55580426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576194_55577934_55578083_55579745
ES.30971.62	chr7	+	4118	31	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	115.122007742511	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55492033	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544704_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.63	chr7	+	4331	32	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.474281171424	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55492033	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55499129_55499367_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.65	chr7	+	4445	32	NNC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	31	200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.474281171424	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55492033	55580446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55499129_55499254_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.67	chr7	+	3711	28	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	120.02758027818	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55492033	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.68	chr7	+	5544	30	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	31	1	intron_retention	FALSE	canonical	3	493	junction_18	47.3379079254023	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACCAGTTTCTTTTAAA	NA	False	NA	6	True	NA	NA	NA	55492033	55580247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.69	chr7	+	4354	30	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	29551	-229	-53	202	3prime_fragment	FALSE	canonical	3	493	junction_18	45.2812324466838	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55521553	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.70	chr7	+	5266	30	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	28	junction_14	112.036483356332	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55521594	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55547721_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.71	chr7	+	4100	30	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	29601	-25	-3	-2	3prime_fragment	FALSE	canonical	3	493	junction_18	45.2812324466838	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55521603	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.73	chr7	+	4105	27	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	1793	202	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	120.054253021869	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55523399	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550166_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.74	chr7	+	3912	26	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	32649	-225	3045	198	3prime_fragment	FALSE	canonical	3	493	junction_14	44.4220845976413	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55524651	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.75	chr7	+	5517	24	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	3073	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	128.237020627264	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAACTTGTCATTAGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	55524679	55582379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.76	chr7	+	3309	21	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	45566	-229	-8924	202	3prime_fragment	FALSE	canonical	3	493	junction_9	47.7193880933107	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55537568	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.77	chr7	+	3098	20	NNC	ENSMUSG00000030447.16	novel	5111	15	NA	NA	-4598	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.711535026248	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55541894	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55542155_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.78	chr7	+	3068	19	ISM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	50864	-229	-3626	202	3prime_fragment	FALSE	canonical	3	493	junction_7	46.382334866351	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55542866	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.79	chr7	+	3064	19	NNC	ENSMUSG00000030447.16	novel	5111	15	NA	NA	-3467	202	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	140.212096834636	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTTGTTCATTGGCA	NA	False	NA	13	True	AATAAA	-16	NA	55543025	55580448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55543149_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.80	chr7	+	3016	19	NNC	ENSMUSG00000030447.16	novel	5111	15	NA	NA	-3414	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	188.554704378358	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCGTTTGTTCATTGGC	NA	False	NA	12	True	AATAAA	-15	NA	55543078	55580447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55543149_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550355_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.81	chr7	+	2784	18	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-1726	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	145.561435441841	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTACCAGTTTCTTTT	NA	False	NA	3	True	NA	NA	NA	55544766	55580244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550166_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.82	chr7	+	4116	16	NIC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	-1	198	intron_retention	FALSE	canonical	3	493	junction_4	50.4439843346613	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCGTTTGTTCATT	NA	False	NA	9	True	AATAAA	-12	NA	55546491	55580444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.83	chr7	+	6222	4	ISM	ENSMUSG00000030447.16	ENSMUST00000173267.8	5111	15	4988	18345	4243	-1559	internal_fragment	FALSE	canonical	3	493	junction_1	41.7079795189788	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAAAGGGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	55551809	55561901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55554014_55554121_55554231_55557066_55557187_55558112
ES.30971.84	chr7	+	3254	7	ISM	ENSMUSG00000030447.16	ENSMUST00000173267.8	5111	15	23670	27	-8140	0	3prime_fragment	FALSE	canonical	3	563	junction_6	48.5649622212924	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55570491	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30971.85	chr7	+	2562	2	NIC	ENSMUSG00000030447.16	novel	4178	32	NA	NA	-2637	0	intron_retention	FALSE	canonical	3	563	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAACAA	NA	False	NA	-22	True	NA	NA	NA	55575994	55580219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55578083_55579745
ES.30971.9	chr7	+	4478	31	NNC	ENSMUSG00000030447.16	novel	6440	31	NA	NA	46	195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	115.38334657422	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTGTTTGCGTTTGTTC	NA	False	NA	6	True	AATAAA	-9	NA	55491865	55580441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536560_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ES.30972.1	chr7	+	179	1	Intergenic	novelGene_25483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTACAGGGTA	NA	False	NA	NA	False	NA	NA	NA	55584546	55584725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_55584500_55584700
ES.30973.1	chr7	-	172	1	Intergenic	novelGene_25482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTAGACTCTGA	NA	False	NA	NA	False	NA	NA	NA	55566373	55566201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_55566200_55566400
ES.30974.1	chr7	-	3951	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	28	-782	2	782	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTCTTTTTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	55612196	55580252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.10	chr7	-	3072	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-32	-1	-3	1	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55612219	55581033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ES.30974.11	chr7	-	3298	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612198	55581034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
ES.30974.12	chr7	-	3161	7	NNC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.5127801840505	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612199	55581034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611958
ES.30974.14	chr7	-	2927	7	NNC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.5127801840505	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612196	55581034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611275_55612143
ES.30974.16	chr7	-	5307	5	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	8	-3	intron_retention	FALSE	canonical	3	17	junction_4	89.8397879561166	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTGGGGTTTCCCAG	NA	False	NA	-23	True	AATAAA	-13	NA	55612208	55581037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ES.30974.17	chr7	-	2735	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	9	295	0	-295	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGAAGAGTTTCCTCAT	NA	False	NA	-1	True	NA	NA	NA	55612178	55581329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ES.30974.18	chr7	-	2986	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	1	-300	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGGGTGAAGAGTTTC	NA	False	NA	-6	True	NA	NA	NA	55612186	55581334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
ES.30974.19	chr7	-	2870	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	26	301	0	-301	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGGGTGAAGAGTTT	NA	False	NA	-7	True	NA	NA	NA	55612198	55581335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.2	chr7	-	3651	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-13	-599	-2	599	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTCTCTAATTGTT	NA	False	NA	NA	False	AATGAA	-24	NA	55612200	55580435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ES.30974.20	chr7	-	2427	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	3	767	3	-767	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTCTCCAGCTTTAGAC	NA	False	NA	NA	False	AATACA	-33	NA	55612221	55581801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.21	chr7	-	1955	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	25	1217	-1	746	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTCTCAGGTGGTG	NA	False	NA	NA	False	TATAAA	-22	NA	55612199	55582251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.22	chr7	-	1723	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	690	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCTCATCATACTAAGG	NA	False	NA	NA	False	ATTAAA	-28	NA	55612219	55582307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
ES.30974.24	chr7	-	2475	4	ISM	ENSMUSG00000030452.17	ENSMUST00000119041.8	2979	7	18021	1283	723	680	3prime_fragment	FALSE	canonical	3	213	junction_2	1.88561808316413	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCATCAATACCTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	55593972	55582317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727
ES.30974.25	chr7	-	1564	6	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	-4	680	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCATCAATACCTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	55612191	55582317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
ES.30974.26	chr7	-	1888	8	NNC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	1	620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.786548602206	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAAATGTTTTATTTT	NA	False	NA	NA	False	TTTAAA	-24	NA	55612186	55582377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_55583296_55585545_55585707_55587319_55587411_55591539_55591612_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.27	chr7	-	1767	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	29	1401	3	562	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACATTTTTATTCATT	NA	False	NA	NA	False	NA	NA	NA	55612195	55582435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.28	chr7	-	1895	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	-3	557	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATTTTACATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	55612201	55582440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
ES.30974.29	chr7	-	1604	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	2	455	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	79.9474827621233	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTGGATCAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	55612196	55582542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55594228_55594458_55611199_55611321_55611947
ES.30974.3	chr7	-	3760	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	24	-587	-2	587	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCATTAATTTTTATT	NA	False	NA	NA	False	AATGAA	-12	NA	55612200	55580447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.30	chr7	-	1502	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	5	1690	-3	273	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTGAACACACTGGTG	NA	False	NA	NA	False	AATGAA	-15	NA	55612219	55582724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.31	chr7	-	1300	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	25	1872	-1	91	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGACTTTGAGTGGCTT	NA	False	NA	NA	False	TTTAAA	-31	NA	55612199	55582906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.32	chr7	-	1120	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	-14	1933	-3	30	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGACTTGTTCAGCTA	NA	False	NA	NA	False	AATATA	-22	NA	55612201	55582967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ES.30974.33	chr7	-	941	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	29	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGACTTGTTCAGCT	NA	False	NA	NA	False	AATATA	-21	NA	55612219	55582968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
ES.30974.34	chr7	-	1102	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	24	2071	-2	-108	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCACCCCCTCGCCTGGA	NA	False	NA	NA	False	CATAAA	-28	NA	55612200	55583105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.35	chr7	-	4352	2	Intergenic	novelGene_25484	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAAGCAGTTTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	55607712	55596168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_55596510_55603701
ES.30974.4	chr7	-	3266	8	NNC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	4	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.4352741724537	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTTTTCTCTTTTT	NA	False	NA	0	True	AATAAA	-36	NA	55612174	55581014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55595003_55595103_55611199_55611321_55611947
ES.30974.5	chr7	-	3214	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	3	-20	3	20	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTTTTCTCTTTTT	NA	False	NA	0	True	AATAAA	-36	NA	55612221	55581014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.6	chr7	-	2891	6	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	16	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	84.7924524943111	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGATGTTTTTCTCT	NA	False	NA	-4	True	AATAAA	-32	NA	55612219	55581018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55612143
ES.30974.7	chr7	-	3012	7	NIC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-3	16	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	69.789564644962	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGATGTTTTTCTCT	NA	False	NA	-4	True	AATAAA	-32	NA	55612219	55581018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55612143
ES.30974.8	chr7	-	3080	8	NNC	ENSMUSG00000030452.17	novel	3197	7	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.486449655767	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGCCCAGTGATGTTT	NA	False	NA	-10	True	AATAAA	-26	NA	55612200	55581024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_55581641_55581743_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ES.30974.9	chr7	-	3903	5	ISM	ENSMUSG00000030452.17	ENSMUST00000119041.8	2979	7	16433	-1	-865	1	3prime_fragment	FALSE	canonical	3	213	junction_2	12.0908022893437	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGTTTCCCAGCCCA	NA	False	NA	-19	True	AATAAA	-17	NA	55595560	55581033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ES.30975.1	chr7	-	3332	1	FSM	ENSMUSG00000108358.2	ENSMUST00000205400.2	1324	1	-2007	-1	-2007	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTTGATTTTTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	55626597	55623265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55623300_55626600
ES.30976.1	chr7	+	491	1	FSM	ENSMUSG00000078087.6	ENSMUST00000183090.2	399	1	-78	-14	-78	14	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCACG	NA	False	NA	NA	False	AATAAA	-14	NA	55663685	55664176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55663700_55664200
ES.30977.1	chr7	-	2933	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	371	-121	371	121	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTTGTGTATCAGTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	55669331	55627193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
ES.30977.2	chr7	-	1905	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	360	918	360	-918	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAGGTTGTTACATTA	NA	False	NA	NA	False	AATAAA	-13	NA	55669342	55628232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
ES.30978.1	chr7	+	199	1	Intergenic	novelGene_25485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCCTGGACCCTTGC	NA	False	NA	NA	False	AAGAAA	-19	NA	55695760	55695959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_55695800_55696000
ES.30979.1	chr7	+	2836	17	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-108	122777	-51	-5701	5prime_fragment	TRUE	canonical	2	10	junction_12	4.2458619560697	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACGATGGGGTTACGTG	NA	False	NA	NA	False	AATAAA	-24	NA	55699892	55758771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433
ES.30979.10	chr7	+	2694	11	ISM	ENSMUSG00000030451.17	ENSMUST00000205303.2	14403	91	49527	99015	32420	17393	intron_retention	FALSE	canonical	3	7	junction_4	3.8742741255621	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	AATAGA	-10	NA	55750151	55781865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916
ES.30979.11	chr7	+	201	1	Intergenic	novelGene_25486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTCAAGCATGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	55755346	55755547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_55755300_55755500
ES.30979.13	chr7	+	10334	64	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	85103	320	-22238	311	3prime_fragment	FALSE	canonical	2	12	junction_1	17.0998726234723	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTCCTTCTTTTTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	55785239	55881191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798570_55802190_55802373_55802791_55802940_55803013_55803211_55803524_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814662_55814772_55814885_55815026_55818573_55818765_55820133_55820240_55820322_55820415_55827572_55827749_55830816_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.15	chr7	+	6729	40	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	119993	-37	12652	0	3prime_fragment	FALSE	canonical	3	23	junction_5	14.6325585108452	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	NA	False	NA	7	True	AATAAA	-16	NA	55820129	55881548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55820240_55820322_55820415_55827572_55827749_55830816_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.16	chr7	+	6353	37	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	130678	-37	23337	0	3prime_fragment	FALSE	canonical	3	23	junction_2	14.0954637655322	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	NA	False	NA	7	True	AATAAA	-16	NA	55830814	55881548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.18	chr7	+	5302	31	NNC	ENSMUSG00000030451.17	novel	15250	93	NA	NA	27160	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.2810162615637	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTACTCTGAATTTGT	NA	False	NA	NA	False	TATAAA	-10	NA	55834637	55881280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844154_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862755_55863196_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.19	chr7	+	5491	30	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	135445	-37	28104	0	3prime_fragment	FALSE	canonical	3	32	junction_3	12.8198901644583	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	NA	False	NA	7	True	AATAAA	-16	NA	55835581	55881548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.20	chr7	+	3805	22	NNC	ENSMUSG00000030451.17	novel	14403	91	NA	NA	-30693	309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.3601362321643	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGATTCCTTCTTTTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	55839554	55881189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_55839724_55840916_55841102_55841541_55841673_55855135_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.21	chr7	+	3809	21	ISM	ENSMUSG00000030451.17	ENSMUST00000205303.2	14403	91	153508	-443	-16115	-188	3prime_fragment	FALSE	canonical	3	39	junction_2	11.4737744443579	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTATTTCTTCAATG	1051	False	NA	NA	False	ATTAAA	-16	NA	55854132	55881323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.22	chr7	+	3590	10	ISM	ENSMUSG00000030451.17	ENSMUST00000205303.2	14403	91	153797	13019	-15826	-12988	internal_fragment	FALSE	canonical	3	39	junction_1	9.41629792788369	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCCCTTTTCTCATC	1340	False	NA	NA	False	NA	NA	NA	55854421	55867861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594
ES.30979.23	chr7	+	3353	16	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	156337	-31	-13774	-6	3prime_fragment	FALSE	canonical	3	42	junction_3	10.2558384455988	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTGTAGGCTGAATT	3392	False	NA	1	True	AATAAA	-10	NA	55856473	55881542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.25	chr7	+	1983	8	ISM	ENSMUSG00000030451.17	ENSMUST00000164095.3	15261	93	172519	-33	2408	-4	3prime_fragment	FALSE	canonical	3	55	junction_2	10.0407333661746	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGGCTGAATTTC	NA	False	NA	3	True	AATAAA	-12	NA	55872655	55881544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.3	chr7	+	4839	30	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-95	96124	-38	20952	5prime_fragment	TRUE	canonical	2	7	junction_17	4.33825446960457	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGGTAATAATGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55699905	55785424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233
ES.30979.4	chr7	+	15328	93	FSM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-78	0	-21	0	multi-exon	FALSE	canonical	2	7	junction_17	17.9453164058863	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	NA	False	NA	7	True	AATAAA	-16	NA	55699922	55881548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798570_55802190_55802373_55802791_55802940_55803013_55803211_55803524_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814662_55814772_55814885_55815026_55818573_55818765_55820133_55820240_55820322_55820415_55827572_55827749_55830816_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.5	chr7	+	15102	93	FSM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-74	222	-17	-185	multi-exon	FALSE	canonical	2	7	junction_17	17.9453164058863	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATTTCTTCAATGCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	55699926	55881326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798570_55802190_55802373_55802791_55802940_55803013_55803211_55803524_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814662_55814772_55814885_55815026_55818573_55818765_55820133_55820240_55820322_55820415_55827572_55827749_55830816_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55851848_55851957_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.30979.6	chr7	+	1706	4	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-73	158133	-16	687	5prime_fragment	FALSE	canonical	3	14	junction_1	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTCATTATTATA	NA	False	NA	NA	False	AGTAAA	-16	NA	55699927	55723415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040
ES.30979.7	chr7	+	4116	20	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-67	115995	-10	1081	5prime_fragment	FALSE	canonical	2	7	junction_17	4.35094793377692	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAAGAAATCAC	NA	False	NA	NA	False	NA	NA	NA	55699933	55765553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449
ES.30979.8	chr7	+	5913	36	ISM	ENSMUSG00000030451.17	ENSMUST00000076226.13	15250	93	-46	85708	11	-19185	5prime_fragment	FALSE	canonical	2	7	junction_17	4.73251885298702	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTCCCTTGATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	55699954	55795840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511
ES.30979.9	chr7	+	15180	92	NIC	ENSMUSG00000030451.17	novel	15250	93	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_70	18.2467092447126	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGGCTGAATTTCTTAA	NA	False	NA	7	True	AATAAA	-16	NA	55699962	55881548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_55700051_55700603_55700697_55717731_55717847_55722040_55722179_55734736_55734957_55737087_55737189_55738004_55738162_55740662_55740774_55742286_55742459_55744012_55744187_55747124_55747314_55748082_55748235_55749826_55749985_55750075_55750190_55753475_55753728_55756086_55756281_55758433_55758635_55762792_55763022_55763145_55763271_55764449_55764629_55771292_55771478_55772060_55772217_55773944_55774131_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798570_55802190_55802373_55802791_55802940_55803013_55803211_55803524_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807533_55809121_55809221_55813489_55813659_55813756_55813883_55814662_55814772_55814885_55815026_55818573_55818765_55820133_55820240_55820322_55820415_55827572_55827749_55830816_55830929_55832152_55832235_55832327_55832472_55833689_55833781_55834053_55834232_55834373_55834456_55834540_55834713_55835582_55835728_55838308_55838535_55839551_55839724_55840914_55841102_55841541_55841683_55843957_55844150_55846803_55846958_55853523_55853656_55854133_55854293_55854381_55854501_55855059_55855186_55855615_55855772_55856269_55856386_55856475_55856675_55857439_55857655_55862568_55862747_55863189_55863352_55865100_55865193_55865594_55865735_55869452_55869641_55870224_55870423_55872657_55872742_55876266_55876409_55876585_55876781_55877549_55877663_55878176_55878368_55879031_55879138_55879408_55879622_55880607
ES.3098.1	chr10	-	186	1	Intergenic	novelGene_2435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAATTTAATGTAATTT	NA	False	NA	NA	False	NA	NA	NA	74844469	74844283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74844300_74844500
ES.30980.1	chr7	-	154	1	Intergenic	novelGene_25487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	55775649	55775495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_55775500_55775600
ES.30981.1	chr7	-	1890	1	Intergenic	novelGene_25488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACTAAATTATACCAT	NA	False	NA	NA	False	NA	NA	NA	55824886	55822996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_55823000_55824900
ES.30982.1	chr7	+	169	1	Intergenic	novelGene_25489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTTTGGTACA	NA	False	NA	NA	False	NA	NA	NA	56544313	56544482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_56544300_56544500
ES.30982.2	chr7	+	171	2	Antisense	novelGene_ENSMUSG00000055026.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGGATTGGACCCA	NA	False	NA	NA	False	AATAAA	-5	NA	56544315	56544566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_56544469_56544548
ES.30983.1	chr7	+	5548	9	FSM	ENSMUSG00000033676.14	ENSMUST00000196198.5	4348	9	-32	-1168	-32	0	multi-exon	FALSE	canonical	1	4	junction_1	10.0739453542294	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGACTGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	57240233	57478550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57240397_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.10	chr7	+	1850	7	NNC	ENSMUSG00000033676.14	novel	5579	9	NA	NA	2	-21788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.0791413879619	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTGGTTGTGAATT	NA	False	NA	NA	False	TTTAAA	-27	NA	57240922	57444275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57443208
ES.30983.11	chr7	+	2530	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	14	3035	3	-1867	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTACCAAGATTTTGTTT	NA	False	NA	NA	False	TATAAA	-29	NA	57240923	57475515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.12	chr7	+	5637	9	NNC	ENSMUSG00000033676.14	novel	5579	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.2167917228706	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGACTGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	57240927	57478550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415469_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.13	chr7	+	10314	1	NIC	ENSMUSG00000033676.14	novel	5712	10	NA	NA	-1875	-15749	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGCCTCAGGATAGAAC	NA	False	NA	NA	False	NA	NA	NA	57440000	57450314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_57440000_57450300
ES.30983.2	chr7	+	4331	9	FSM	ENSMUSG00000033676.14	ENSMUST00000196198.5	4348	9	20	-3	20	3	multi-exon	FALSE	canonical	1	4	junction_1	10.0739453542294	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTACTGTCTTTCCAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	57240285	57477385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57240397_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.3	chr7	+	5616	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	-37	0	-37	0	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGACTGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	57240872	57478550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.4	chr7	+	5560	9	NNC	ENSMUSG00000033676.14	novel	5579	9	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5589521583922	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGAAGACTGATTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	57240916	57478547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_57241104_57241228_57241321_57241527_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.5	chr7	+	1346	6	ISM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	35616	-4	-23129	5prime_fragment	FALSE	canonical	3	23	junction_5	6.72309452558864	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGTCTGGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57240916	57442934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239
ES.30983.6	chr7	+	1579	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	3993	-4	-2825	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGCCTGTCAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	57240916	57474557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.7	chr7	+	3323	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	7	2249	-4	-1081	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGTGAGGGACAGTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	57240916	57476301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30983.8	chr7	+	3185	8	NIC	ENSMUSG00000033676.14	novel	5579	9	NA	NA	-4	-1081	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	12.5973758200278	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGTGAGGGACAGTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	57240916	57476301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57461801_57461955_57466022_57466268_57474165
ES.30983.9	chr7	+	3574	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	11	1994	0	-826	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCTTATCCCTTTCAA	NA	False	NA	NA	False	AATACA	-10	NA	57240920	57476556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ES.30984.1	chr7	-	3884	1	Intergenic	novelGene_25490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57888798	57884914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_57884900_57888800
ES.30985.1	chr7	-	161	1	Intergenic	novelGene_25491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	57898694	57898533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_57898500_57898700
ES.30986.1	chr7	+	177	1	Intergenic	novelGene_25492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAGAACAAGAT	NA	False	NA	NA	False	NA	NA	NA	58279089	58279266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_58279100_58279300
ES.30987.2	chr7	+	5419	21	NNC	ENSMUSG00000025324.9	novel	5419	21	NA	NA	-34	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	4.39431450854397	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGTCTGGTGCCACT	NA	False	NA	NA	False	AATAAA	-18	NA	58307959	58479170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476856_58476902_58476993_58477099_58477522_58477711_58477866
ES.30987.3	chr7	+	5454	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	-33	-2	-33	2	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGTCTGGTGCCACT	NA	False	NA	NA	False	AATAAA	-18	NA	58307960	58479170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
ES.30987.4	chr7	+	5042	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	-19	396	-19	-396	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTAGATTTATTTTT	NA	False	NA	NA	False	TATAAA	-27	NA	58307974	58478772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
ES.30987.5	chr7	+	5196	21	NNC	ENSMUSG00000025324.9	novel	5419	21	NA	NA	44	-65	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	4.33128156554154	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCGGTGTTGTGTGTA	NA	False	NA	NA	False	CATAAA	-20	NA	58308037	58479103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474161_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
ES.30988.1	chr7	-	2484	1	Intergenic	novelGene_25493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAACATTTAATTGG	NA	False	NA	NA	False	NA	NA	NA	58870687	58868203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_58868200_58870700
ES.30989.1	chr7	+	4844	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-287	5299	-235	-490	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATATCATTTTACT	NA	False	NA	16	True	AATAAA	-32	NA	58878262	58955985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.10	chr7	+	3790	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-12	1133	-11	650	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTCTTCATGTGTCTT	NA	False	NA	4	True	ATTAAA	-18	NA	58878486	58955342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.11	chr7	+	3910	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-11	650	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTCTTCATGTGTCTT	NA	False	NA	4	True	ATTAAA	-18	NA	58878486	58955342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.12	chr7	+	3427	14	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-11	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	104.567975683101	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878486	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58924015_58924099_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.13	chr7	+	9026	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-5	-4110	-4	-699	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGTGTCTTTCCATTT	NA	False	NA	10	True	NA	NA	NA	58878493	58960585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.14	chr7	+	4431	12	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	-4	172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	82.0746485456033	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCACTTGCTTCCTAATC	NA	False	NA	NA	False	AAAAAG	-23	NA	58878493	58956649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557_58955976_58956634
ES.30989.15	chr7	+	3480	14	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-4	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	103.965344703936	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878493	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58897039_58897183_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.16	chr7	+	3397	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-53	6512	-1	80	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAGTGAACCACAGTAG	NA	False	NA	NA	False	AAAAAG	-6	NA	58878496	58954772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.18	chr7	+	9785	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-2	-4872	-1	63	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTTGTTATCTTTGT	NA	False	NA	2	True	NA	NA	NA	58878496	58961347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.19	chr7	+	5055	12	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.292066049756	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTCTTCAGTTTA	NA	False	NA	11	True	AATAAA	-11	NA	58878496	58956479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58920481_58920620_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.2	chr7	+	3284	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-126	1753	-125	30	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAGGGATAATTTGAT	NA	False	NA	NA	False	NA	NA	NA	58878372	58954722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.20	chr7	+	8485	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-2	-3572	-1	-1237	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCATTTCTCCTACT	NA	False	NA	15	True	NA	NA	NA	58878496	58960047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.21	chr7	+	4094	14	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	4	645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	104.089742800206	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTTGTCTTCATGT	NA	False	NA	-1	True	ATTAAA	-13	NA	58878502	58955337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58920481_58920620_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.22	chr7	+	5098	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-46	4804	5	3	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878503	58956480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.24	chr7	+	4515	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	14	-502	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGAGACATACTGGTA	NA	False	NA	4	True	AATAAA	-20	NA	58878512	58955973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.25	chr7	+	3259	12	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	14	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	91.0043137657053	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878512	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936607_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.26	chr7	+	3461	13	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	14	17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	102.206864033467	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878512	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58893097_58893218_58896920_58896966_58907557_58907768_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.27	chr7	+	5339	4	NNC	ENSMUSG00000025326.13	novel	3586	6	NA	NA	14	-1246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	88.283633817373	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACATGTTTTCATT	NA	False	NA	6	True	NA	NA	NA	58878512	58960038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58921694_58921734_58955290
ES.30989.28	chr7	+	4937	12	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	99.9493260037057	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878514	58956480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58911769_58911807_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.29	chr7	+	3369	14	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	16	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	103.560176029068	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878514	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58890714_58890782_58893097_58893218_58896474_58896528_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.3	chr7	+	4992	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-75	-6	-74	4	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTCTTCAGTTTATT	NA	False	NA	13	True	AATAAA	-13	NA	58878423	58956481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.30	chr7	+	4369	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	41	501	-10	-501	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGAGACATACTGGTAT	NA	False	NA	5	True	AATAAA	-21	NA	58878539	58955974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.31	chr7	+	5016	12	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.123686641657	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTGTTCTTCAGTTT	NA	False	NA	10	True	AATAAA	-10	NA	58878539	58956478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58897039_58897183_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.32	chr7	+	3758	13	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	0	648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0763947219989	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGTCTTCATGTGTC	NA	False	NA	2	True	ATTAAA	-16	NA	58878549	58955340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935955_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.33	chr7	+	3662	6	ISM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	1	33098	1	2087	5prime_fragment	FALSE	canonical	3	50	junction_1	68.7924414452634	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTATTATCTTC	NA	False	NA	NA	False	AATAAA	-25	NA	58878550	58928186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515
ES.30989.34	chr7	+	4819	10	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	81.5325429233969	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878550	58956480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.35	chr7	+	3218	13	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	101.343852250094	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58878551	58954678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58893097_58893218_58896920_58896966_58911769_58911807_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.36	chr7	+	9155	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	2	699	2	-699	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGTGTCTTTCCATTT	NA	False	NA	10	True	NA	NA	NA	58878551	58960585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.37	chr7	+	9008	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	2	-779	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTCTTGTGTTGAAT	NA	False	NA	-70	True	NA	NA	NA	58878551	58960505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.38	chr7	+	4392	12	NNC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	3	-502	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	99.9493260037057	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGAGACATACTGGTA	NA	False	NA	4	True	AATAAA	-20	NA	58878552	58955973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896966_58911769_58911807_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.39	chr7	+	3830	9	FSM	ENSMUSG00000025326.13	ENSMUST00000202945.4	3889	9	56	3	4	-3	multi-exon	FALSE	canonical	3	99	junction_1	45.7247197913776	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGTTGAAGTGTTTTCA	NA	False	NA	NA	False	AATAAA	-11	NA	58878553	58939564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454
ES.30989.4	chr7	+	3316	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-41	26	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAGAGGGATAATT	NA	False	NA	NA	False	NA	NA	NA	58878456	58954718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.40	chr7	+	9913	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	5	-62	5	62	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTGTTATCTTTG	NA	False	NA	1	True	NA	NA	NA	58878554	58961346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.41	chr7	+	9852	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	60	-5001	9	192	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGGTCTTTAGATTCT	NA	False	NA	NA	False	AATATA	-13	NA	58878558	58961476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.43	chr7	+	8789	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-10	-990	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCCCATTGTCCTATG	NA	False	NA	NA	False	NA	NA	NA	58878559	58960294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.44	chr7	+	4668	4	ISM	ENSMUSG00000025326.13	ENSMUST00000202207.4	3586	6	-10	7822	-10	-1548	5prime_fragment	FALSE	canonical	3	99	junction_1	51.6161042914149	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGGACTTCTGATCTT	NA	False	NA	NA	False	NA	NA	NA	58878559	58929388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515
ES.30989.45	chr7	+	4391	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	10	5455	-10	-646	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGATTTCATGTCCTAT	NA	False	NA	NA	False	AATAAA	-38	NA	58878559	58955829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.46	chr7	+	4730	11	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.0349347648965	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTGTTCTTCAGTTT	NA	False	NA	10	True	AATAAA	-10	NA	58878559	58956478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58896920_58896970_58921821_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.47	chr7	+	3902	13	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-5	582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.49671403947	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGAACCACAGCCCT	NA	False	NA	-64	True	AATAAA	-20	NA	58878564	58955274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58893097_58893218_58896920_58896966_58920481_58920620_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.48	chr7	+	2881	6	FSM	ENSMUSG00000025326.13	ENSMUST00000202207.4	3586	6	-5	710	-5	-710	multi-exon	FALSE	canonical	3	99	junction_1	53.9058438390496	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATGGCTTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	58878564	58936500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801
ES.30989.49	chr7	+	5142	13	NNC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	33	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	102.206864033467	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878602	58956480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_58879020_58893097_58893218_58896920_58896966_58907557_58907768_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.5	chr7	+	5686	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	-41	-734	-40	732	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	58878457	58957209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.50	chr7	+	3735	10	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	408	1766	-18	17	intron_retention	FALSE	canonical	3	99	junction_1	49.5141830285793	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878906	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415
ES.30989.51	chr7	+	6403	11	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-2587	647	intron_retention	FALSE	canonical	3	115	junction_1	47.7586641354215	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTTGTCTTCATGTGT	NA	False	NA	1	True	ATTAAA	-15	NA	58890068	58955339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.52	chr7	+	4398	10	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	18418	-4	4261	2	3prime_fragment	FALSE	canonical	3	199	junction_2	30.0739828497066	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTCTTCAGTTTA	NA	False	NA	11	True	AATAAA	-11	NA	58896916	58956479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.53	chr7	+	2628	10	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	18418	1766	4261	17	3prime_fragment	FALSE	canonical	3	199	junction_2	30.0739828497066	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58896916	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.54	chr7	+	4060	8	ISM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	47016	-4	-1168	2	3prime_fragment	FALSE	canonical	3	221	junction_3	26.2281979431859	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTTCTTCAGTTTA	NA	False	NA	11	True	AATAAA	-11	NA	58925514	58956479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.56	chr7	+	596	1	FSM	ENSMUSG00000025326.13	ENSMUST00000200949.2	4254	1	3658	0	-1822	0	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58930340	58930936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58930300_58930900
ES.30989.57	chr7	+	6945	3	ISM	ENSMUSG00000025326.13	ENSMUST00000202288.2	442	4	1764	-6593	1764	-1	3prime_fragment	FALSE	canonical	3	290	junction_1	1.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTGCTAGTATTTT	NA	False	NA	8	True	NA	NA	NA	58938453	58961283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58938529_58953415_58953560_58954557
ES.30989.58	chr7	+	3407	1	NIC	ENSMUSG00000025326.13	novel	4911	11	NA	NA	1483	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	58951272	58954679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58951300_58954700
ES.30989.59	chr7	+	2264	2	FSM	ENSMUSG00000025326.13	ENSMUST00000202685.2	436	2	-1811	-17	1658	17	multi-exon	FALSE	canonical	3	293	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58951447	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58953560_58954557
ES.30989.6	chr7	+	3251	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-38	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	88.8916138241649	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAAAATAAATATAAGA	NA	False	NA	NA	False	NA	NA	NA	58878459	58954709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58890714_58890782_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.60	chr7	+	5186	1	ISM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	77136	413	2427	-413	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTCTTTTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	58955685	58960871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_58955700_58960900
ES.30989.7	chr7	+	4408	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-24	-648	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAAGATTTCATGTCCT	NA	False	NA	NA	False	AATAAA	-36	NA	58878473	58955827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.8	chr7	+	3981	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	-66	5941	-14	651	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCATGTGTCTTG	NA	False	NA	5	True	ATTAAA	-19	NA	58878483	58955343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.30989.9	chr7	+	5049	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTCTTCAGTTTAT	NA	False	NA	12	True	AATAAA	-12	NA	58878485	58956480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ES.3099.1	chr10	+	4203	10	NIC	ENSMUSG00000020175.16	novel	2620	11	NA	NA	-2	-1	intron_retention	TRUE	canonical	0	0	junction_1	0.314269680527354	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGTGTGATGAGCATG	NA	False	NA	NA	False	ATTAAA	-18	NA	74873102	74890579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_74874353_74877671_74877764_74880302_74880369_74881863_74881966_74884280_74884346_74885727_74885784_74886473_74886552_74886821_74886913_74887749_74887876_74888302
ES.3099.2	chr10	+	2415	1	NIC	ENSMUSG00000020175.16	novel	952	6	NA	NA	6	-6401	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	74873110	74875525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_74873100_74875500
ES.30990.1	chr7	-	220	1	Intergenic	novelGene_25494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAACAAGTCAAAATAC	NA	False	NA	NA	False	NA	NA	NA	58912209	58911989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_58912000_58912200
ES.30991.1	chr7	+	6323	2	Genic_Genomic	ENSMUSG00000109157.2	novel	3193	1	NA	NA	-5862	-2678	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACACACAAGGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	58962516	58968893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_58964658_58964711
ES.30992.1	chr7	+	3540	1	Antisense	novelGene_ENSMUSG00000000948.17_AS_novelGene_ENSMUSG00000100826.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATGAAAATGCAACCC	NA	False	NA	NA	False	NA	NA	NA	59623847	59627387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_59623800_59627400
ES.30993.1	chr7	+	6471	1	Antisense	novelGene_ENSMUSG00000077191.3_AS_novelGene_ENSMUSG00000089375.3_AS_novelGene_ENSMUSG00000000948.17_AS_novelGene_ENSMUSG00000102252.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59628072	59634543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_59628100_59634500
ES.30994.1	chr7	+	148	1	Intergenic	novelGene_25495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAAATTTAGCTAATGT	NA	False	NA	NA	False	NA	NA	NA	59805942	59806090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_59805900_59806100
ES.30995.1	chr7	+	712	1	Intergenic	novelGene_25496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATTCATCAACATAAA	NA	False	NA	NA	False	NA	NA	NA	59813003	59813715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_59813000_59813700
ES.30996.1	chr7	-	5226	9	Fusion	ENSMUSG00000100826.7_ENSMUSG00000000948.17	novel	6861	12	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_1	35.7587401903367	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTTGAAAATATAGATT	NA	False	NA	NA	False	AATAAA	-15	NA	59630692	59587118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59590738_59594323_59594463_59596262_59596389_59605392_59605473_59606461_59606549_59620031_59620292_59621627_59621693_59623018_59623399_59630222
ES.30996.10	chr7	-	7257	4	ISM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000189581.7	6861	12	-3933	32207	-818	-1	intron_retention	FALSE	canonical	3	56	junction_3	13.2748718344933	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59629440	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594
ES.30996.11	chr7	-	11348	10	Fusion	ENSMUSG00000102252.6_ENSMUSG00000100826.7	novel	1932	10	NA	NA	-11721	-1	intron_retention	FALSE	canonical	0	0	junction_2	944.311520057645	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59637228	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623014_59623399_59623594_59623648_59623744_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159
ES.30996.12	chr7	-	2044	4	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	2	-2	multi-exon	FALSE	canonical	0	0	junction_3	39.1492869241148	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCATAGTTTGTGTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	59628620	59619326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59627986
ES.30996.14	chr7	-	2932	4	Fusion	ENSMUSG00000100826.7_ENSMUSG00000000948.17	novel	6861	12	NA	NA	1804	-2	multi-exon	FALSE	canonical	1	1	junction_3	38.6810318143431	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCATAGTTTGTGTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	59628620	59619326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59627098
ES.30996.15	chr7	-	6419	6	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	2	-2	multi-exon	FALSE	canonical	0	0	junction_3	33.7662553446484	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCATAGTTTGTGTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	59628620	59619326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59621963_59622044_59623018_59623399_59623594_59623648_59623744
ES.30996.16	chr7	-	6337	6	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	64	-3	multi-exon	FALSE	canonical	1	1	junction_3	33.5356526699571	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCATAGTTTGTGTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	59628558	59619327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59621963_59622025_59623018_59623399_59623594_59623648_59623744
ES.30996.17	chr7	-	4176	5	NNC	ENSMUSG00000100826.7	novel	6861	12	NA	NA	-1186	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	32.7910048641392	162	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCATAGTTTGTGTTT	NA	False	NA	-9	True	ATTAAA	-17	NA	59626693	59619327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59620292_59621627_59621693_59623018_59623164_59623594_59623648_59623744
ES.30996.18	chr7	-	6691	4	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	2193	3	NA	NA	2	-4	intron_retention	FALSE	canonical	1	1	junction_3	40.7785346584314	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTCATAGTTTGTGTT	NA	False	NA	-10	True	ATTAAA	-16	NA	59628620	59619328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59621963_59622025_59623018
ES.30996.19	chr7	-	6029	5	ISM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000189581.7	6861	12	-3113	32518	2	-312	5prime_fragment	FALSE	canonical	3	50	junction_4	15.4008928312614	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACATTCCTCTCATATT	NA	False	NA	NA	False	ATTAAA	-16	NA	59628620	59619636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744
ES.30996.2	chr7	-	7748	3	FSM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000188976.2	2193	3	-5551	-4	-1108	4	multi-exon	FALSE	canonical	3	77	junction_2	5.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGTGTTTTTCTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	59629730	59619320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_59620292_59621627_59621693_59623018
ES.30996.20	chr7	-	5138	1	Genic_Genomic	ENSMUSG00000100826.7_ENSMUSG00000000948.17	novel	NA	NA	NA	NA	-388	-1433	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAAGCAATGTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	59625895	59620757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_59620800_59625900
ES.30996.21	chr7	-	2891	1	FSM	ENSMUSG00000000948.17	ENSMUST00000191456.2	3937	1	3696	-2650	3696	59	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGGACAGCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	59626728	59623837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_59623800_59626700
ES.30996.22	chr7	-	3377	1	FSM	ENSMUSG00000000948.17	ENSMUST00000191456.2	3937	1	1804	-1244	1804	1244	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACACATTGGGTATTC	NA	False	NA	NA	False	NA	NA	NA	59628620	59625243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_59625200_59628600
ES.30996.23	chr7	-	3235	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	30	1329	intron_retention	FALSE	canonical	0	0	junction_1	645.101733770403	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGTCTCATGTGTT	NA	False	NA	NA	False	NA	NA	NA	59654829	59630913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633112_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ES.30996.25	chr7	-	1924	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	1	7	1	0	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACTTATTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	59654858	59632249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ES.30996.26	chr7	-	1393	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	-74	613	-74	-606	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTGTCTGCTGATT	NA	False	NA	-3	True	AATAAA	-24	NA	59654933	59632855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ES.30996.28	chr7	-	7933	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-17	-608	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	631.084271729768	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTTGTCTGCTGA	NA	False	NA	-5	True	AATAAA	-22	NA	59654876	59632857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59644991_59645049_59645303_59649065_59649162_59654783
ES.30996.29	chr7	-	1365	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-1	-614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	805.763513693689	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654860	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59653517_59653571_59654783
ES.30996.3	chr7	-	6524	5	ISM	ENSMUSG00000100826.7_ENSMUSG00000077191.3	ENSMUST00000189581.7	6861	12	-3296	32206	-181	0	5prime_fragment	FALSE	canonical	3	50	junction_4	15.4008928312614	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	-6	True	ATTAAA	-20	NA	59628803	59619324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744
ES.30996.30	chr7	-	1475	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-47	-614	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	800.001531248535	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654906	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652693_59652811_59654783
ES.30996.31	chr7	-	1456	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-17	-614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	804.198259137633	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654876	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652682_59652811_59654783
ES.30996.32	chr7	-	1477	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-17	-614	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	789.087859493479	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654876	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59648013_59648163_59649065_59649162_59654783
ES.30996.33	chr7	-	1387	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	253	-614	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	642.610955015687	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654606	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654454
ES.30996.34	chr7	-	1699	12	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	-23424	-614	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	898.148738809332	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59813391	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59721632_59721737_59781997_59782146_59813179
ES.30996.35	chr7	-	1843	11	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	861	-614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	811.471755515865	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59653998	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652683_59652811_59653517
ES.30996.37	chr7	-	2348	9	NIC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	1	-614	intron_retention	FALSE	canonical	3	1774	junction_5	128.923851071088	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654858	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59638496_59645153_59645303_59649065_59649162_59654783
ES.30996.38	chr7	-	1445	11	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	807	-614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	805.763513693689	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654052	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59653517_59653639_59653963
ES.30996.39	chr7	-	2217	12	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	966	-614	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	953.275605564985	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59653893	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59648013_59648163_59649065_59649162_59652353_59652811_59653517
ES.30996.4	chr7	-	6537	4	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	50	junction_3	15.9652400197707	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	-6	True	ATTAAA	-20	NA	59628620	59619324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623648_59623744
ES.30996.40	chr7	-	3870	7	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	13482	-614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	740.141803230225	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	7930	False	NA	-11	True	AATAAA	-16	NA	59641377	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633118_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349
ES.30996.41	chr7	-	1348	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-18	-614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	917.71994094059	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654877	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636600_59637257_59637312_59638349_59638496_59645153_59645303_59648013_59648163_59649065_59649162_59654783
ES.30996.42	chr7	-	1615	13	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	932	-614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	950.180461660953	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59653927	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652693_59652811_59652987_59653068_59653517_59653571_59653797
ES.30996.43	chr7	-	1288	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	631.084271729768	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654859	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645176_59645303_59649065_59649162_59654783
ES.30996.46	chr7	-	1582	12	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	-23519	-614	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	899.034477501023	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59813486	59632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59721632_59721737_59781997_59782146_59813391
ES.30996.48	chr7	-	1449	11	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	882	-616	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	805.363619739556	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGGGGTTTTTCTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	59653977	59632865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59653517_59653641_59653884
ES.30996.49	chr7	-	1618	11	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	-23661	-616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	811.867384490842	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGGGGTTTTTCTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	59813628	59632865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59781997_59782146_59813391
ES.30996.5	chr7	-	6287	4	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	2	-1	multi-exon	FALSE	canonical	1	1	junction_3	38.6810318143431	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59628620	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59623744
ES.30996.50	chr7	-	1214	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	-17	-616	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	628.603390240796	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGGGGTTTTTCTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	59654876	59632865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638384_59645153_59645303_59649065_59649162_59654783
ES.30996.51	chr7	-	1582	12	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	4	-616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	949.823472072139	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGGGGTTTTTCTTTG	NA	False	NA	-13	True	AATAAA	-14	NA	59654855	59632865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59648013_59648163_59649065_59649162_59652682_59652811_59654783
ES.30996.53	chr7	-	2102	15	NNC	ENSMUSG00000102252.6	novel	2076	11	NA	NA	-23474	-620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	998.591265386456	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCAATTGGGGTTTTTC	NA	False	NA	-17	True	AATAAA	-10	NA	59813441	59632869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59657246_59657438_59660084_59660168_59664402_59664488_59721632_59721737_59781997_59782146_59813179
ES.30996.7	chr7	-	3824	13	Fusion	ENSMUSG00000102252.6_ENSMUSG00000100826.7	novel	1932	10	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_4	938.558187978893	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59654839	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59630222_59630388_59631997_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ES.30996.8	chr7	-	2308	7	Fusion	ENSMUSG00000100826.7_ENSMUSG00000077191.3	novel	6861	12	NA	NA	2	-1	multi-exon	FALSE	canonical	0	0	junction_5	34.3240278651689	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59628620	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59623744_59623870_59625666_59625752_59627986
ES.30996.9	chr7	-	3935	16	Fusion	ENSMUSG00000102252.6_ENSMUSG00000100826.7	novel	1932	10	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	969.01002402796	641	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATAGTTTGTGTTTTT	NA	False	NA	-7	True	ATTAAA	-19	NA	59654858	59619325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_59620292_59621627_59621693_59623018_59623399_59623594_59623648_59630222_59630388_59630745_59630876_59631997_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ES.30997.1	chr7	+	7166	4	Antisense	novelGene_ENSMUSG00000068151.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATATAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	60832050	60840946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_60832680_60832893_60834658_60834907_60839077_60840342
ES.30998.1	chr7	+	173	1	Intergenic	novelGene_25497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	61526854	61527027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_61526900_61527000
ES.30999.1	chr7	-	5710	37	Fusion	ENSMUSG00000045813.8_ENSMUSG00000109321.2	novel	3003	22	NA	NA	-45	1357	intron_retention	TRUE	canonical	0	0	junction_1	0.395772412465972	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTCTTCATTTGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	61859272	61578527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_61580242_61581095_61581242_61594878_61594990_61624743_61624839_61631424_61631517_61634519_61634616_61635945_61636025_61669696_61669791_61688735_61688831_61713680_61713767_61714927_61715037_61720150_61720365_61740861_61740944_61744346_61744427_61750129_61750185_61752446_61752610_61754016_61754143_61761914_61761956_61764393_61764525_61767470_61767651_61768642_61768792_61840464_61840584_61840896_61840950_61841752_61841816_61842379_61842449_61843231_61843342_61846617_61846714_61850305_61850397_61851752_61851893_61852758_61852844_61853071_61853344_61853842_61854059_61856010_61856158_61856253_61856346_61856487_61856552_61857110_61857189_61859195
ES.31.1	chr1	+	173	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	6184226	6184399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_6184200_6184400
ES.310.1	chr1	+	176	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37275441	37275617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37275400_37275600
ES.3100.1	chr10	+	4844	17	NIC	ENSMUSG00000009681.11	novel	6839	23	NA	NA	-24	1163	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	11.0409394414606	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	74896399	75008543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75007166
ES.3100.10	chr10	+	4291	1	Intergenic	novelGene_2438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAGAAAAAA	6390	False	NA	NA	False	NA	NA	NA	74985023	74989314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_74985000_74989300
ES.3100.11	chr10	+	157	1	Intergenic	novelGene_2439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAAAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	74988951	74989108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_74989000_74989100
ES.3100.12	chr10	+	1485	8	FSM	ENSMUSG00000009681.11	ENSMUST00000218465.2	1460	8	-11	-14	-11	14	multi-exon	FALSE	canonical	0	0	junction_1	15.7635591132957	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTCCCTCTGTTTAG	NA	False	NA	23	True	AATAAA	-32	NA	75009785	75018628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75010000_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.2	chr10	+	4752	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-23	2110	-23	29	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGTGGGGATGCCTTCA	NA	False	NA	38	True	NA	NA	NA	74896400	75018643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.3	chr10	+	6861	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	-22	0	-22	0	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTTTGTGGTGGTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	74896401	75020753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.5	chr10	+	6816	22	NIC	ENSMUSG00000009681.11	novel	6839	23	NA	NA	-1	15	intron_retention	FALSE	canonical	3	29	junction_3	6.22809085083531	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCCCTCTGTTTAGG	NA	False	NA	24	True	AATAAA	-33	NA	74896422	75018629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.6	chr10	+	4587	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	0	2252	0	-113	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTCTACT	NA	False	NA	NA	False	NA	NA	NA	74896423	75018501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.7	chr10	+	4690	18	NNC	ENSMUSG00000009681.11	novel	6839	23	NA	NA	4	1297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.9244128549968	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGGTTTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	74896427	75008677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_74896463_74897131_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75006757
ES.3100.8	chr10	+	4946	21	ISM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	70428	2	-29340	-2	3prime_fragment	FALSE	canonical	3	29	junction_1	6.14084684713762	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCGGTTTGTGGTGGTT	NA	False	NA	13	True	ATTAAA	-13	NA	74966851	75020751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.3100.9	chr10	+	2704	20	ISM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	70906	2139	-28862	0	3prime_fragment	FALSE	canonical	3	29	junction_13	5.66663950892411	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGGGGCCACAGCCAT	146	False	NA	9	True	AATAAA	-18	NA	74967329	75018614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ES.31000.1	chr7	+	1632	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1725	337	1725	-337	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATACTGTGAAATAATT	NA	False	NA	NA	False	AATAAA	-17	NA	61998041	61999673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_61998000_61999700
ES.31001.1	chr7	-	2672	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	125	-250	125	250	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGAAAGAAAATCGTA	NA	False	NA	NA	False	AATAAA	-9	NA	62069762	62067090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62067100_62069800
ES.31001.2	chr7	-	2576	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	-29	0	-29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGACTCTTTTTTTAAT	NA	False	NA	0	True	AATAAA	-18	NA	62069916	62067340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62067300_62069900
ES.31001.3	chr7	-	2456	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	-13	104	-13	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTAAAGTCCAAGTGTG	NA	False	NA	-104	True	AATAAA	-18	NA	62069900	62067444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62067400_62069900
ES.31002.1	chr7	+	121	1	Antisense	novelGene_ENSMUSG00000070526.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62112902	62113023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_62112900_62113000
ES.31003.1	chr7	-	5730	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-49	-3041	-49	3041	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCATTTATTCATCTA	NA	False	NA	2	True	AATAAA	-17	NA	62114307	62108577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62108600_62114300
ES.31003.2	chr7	-	859	1	Intergenic	novelGene_25498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTATATACATTTTTT	NA	False	NA	-106	True	NA	NA	NA	62109544	62108685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_62108700_62109500
ES.31003.3	chr7	-	2670	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-30	0	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGCCTAACATTTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	62114288	62111618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62111600_62114300
ES.31003.4	chr7	-	2587	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-54	107	-54	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAGAAGCCCAAAAGTA	NA	False	NA	NA	False	AATAAA	-31	NA	62114312	62111725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62111700_62114300
ES.31003.5	chr7	-	1585	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	-13	1068	-13	-1068	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTGTCCCCTCTTTT	NA	False	NA	NA	False	AATAGA	-11	NA	62114271	62112686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62112700_62114300
ES.31004.1	chr7	+	5163	1	Intergenic	novelGene_25499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAGCAA	NA	False	NA	NA	False	NA	NA	NA	62728630	62733793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_62728600_62733800
ES.31005.1	chr7	-	5161	11	NNC	ENSMUSG00000030525.9	novel	2078	10	NA	NA	-7	3137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.26704891960966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTGTCTGGAAAAATAG	NA	False	NA	0	True	AATAAA	-28	NA	62862268	62745302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_62747994_62748054_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ES.31005.3	chr7	-	5129	8	NIC	ENSMUSG00000030525.9	novel	2078	10	NA	NA	-18	3132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	5.90053612230382	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTGTTGTCTGGAAA	NA	False	NA	-5	True	AATAAA	-23	NA	62862335	62745307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62861855_62861996_62862169
ES.31005.5	chr7	-	5278	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	-71	-3129	-15	3129	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTATTACTGTTGTCTGG	NA	False	NA	-8	True	AATAAA	-20	NA	62862332	62745310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ES.31005.7	chr7	-	4493	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	-46	-2369	10	2369	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTCTACTTATCTGCC	NA	False	NA	NA	False	AATAAA	-27	NA	62862307	62746070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ES.31005.8	chr7	-	4431	11	NNC	ENSMUSG00000030525.9	novel	2078	10	NA	NA	3	2361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.26704891960966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTAACATTTCTACT	NA	False	NA	NA	False	AATAAA	-19	NA	62862314	62746078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_62747994_62748054_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ES.31005.9	chr7	-	1709	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	-7	376	-7	-376	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCTTCTGTTTACTTT	NA	False	NA	NA	False	AAAAAG	-5	NA	62862268	62748815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ES.31006.1	chr7	+	3505	14	NIC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	2.1973625933978	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGGAGTGTTTTACATG	NA	False	NA	NA	False	AATAAA	-24	NA	63094496	63408775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63094676_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ES.31006.2	chr7	+	4821	14	NIC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	4	1321	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	2.1973625933978	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAATTTCTTTTTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	63094502	63410097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63094676_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ES.31006.3	chr7	+	3472	11	NNC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	6	-21960	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	2.11896201004171	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAGTGGGGTAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	63094504	63385713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63094676_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63383670
ES.31006.4	chr7	+	3576	15	NNC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.44532039551767	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGTGTTTTACATGCTT	NA	False	NA	NA	False	AATAAA	-27	NA	63094505	63408778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63094676_63190682_63190760_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ES.31006.5	chr7	+	3778	12	NNC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	10	-21694	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.93173009029038	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTGACACATCAAATCAA	NA	False	NA	NA	False	TATAAA	-23	NA	63094534	63385979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63094676_63190682_63190760_63265036_63265167_63299356_63299451_63300558_63300714_63335116_63335300_63346761_63346981_63377165_63377268_63378809_63378938_63379544_63379657_63383411_63383540_63383670
ES.31006.6	chr7	+	3368	13	NIC	ENSMUSG00000033510.15	novel	3483	14	NA	NA	13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.28521820013368	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGGGAGTGTTTTACA	NA	False	NA	NA	False	AATAAA	-22	NA	63094537	63408773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63094676_63265036_63265167_63300558_63300714_63335116_63335300_63346758_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ES.31006.7	chr7	+	6235	12	NNC	ENSMUSG00000033510.15	novel	2057	11	NA	NA	61352	-19291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.934547707558	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCCCGTCTCTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	63155876	63388382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63155995_63265036_63265167_63267533_63267684_63299356_63299451_63300558_63300714_63335116_63335300_63346761_63346981_63377165_63377268_63378809_63378938_63379540_63379657_63383411_63383540_63383670
ES.31007.1	chr7	+	1445	1	Intergenic	novelGene_25500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCATGAGGAGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	63418357	63419802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63418400_63419800
ES.31008.1	chr7	+	175	1	Intergenic	novelGene_25502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGACTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	63439098	63439273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63439100_63439300
ES.31008.2	chr7	+	221	2	Intergenic	novelGene_25503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTAAAATAAAAGATGTT	NA	False	NA	NA	False	NA	NA	NA	63439098	63448137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63439281_63448098
ES.31009.1	chr7	-	375	3	Intergenic	novelGene_25501	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGTGGGACTGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	63452675	63419341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63419421_63420547_63420702_63452533
ES.3101.1	chr10	-	202	1	Intergenic	novelGene_2436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGTTGAAAGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	74924952	74924750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74924800_74925000
ES.31010.1	chr7	+	161	1	Intergenic	novelGene_25504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTTTTTCACTA	NA	False	NA	NA	False	NA	NA	NA	63528880	63529041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63528900_63529000
ES.31011.1	chr7	+	2447	1	Antisense	novelGene_ENSMUSG00000052040.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63534949	63537396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_63534900_63537400
ES.31012.1	chr7	+	1076	3	NIC	ENSMUSG00000098708.8	novel	689	4	NA	NA	-62	498	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	63546218	63549944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63546308_63547821_63547913_63549048
ES.31013.1	chr7	+	175	1	Intergenic	novelGene_25506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTGCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	63582632	63582807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63582600_63582800
ES.31014.1	chr7	+	3846	1	Antisense	novelGene_ENSMUSG00000052040.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCAGAAAGTGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	63588459	63592305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_63588500_63592300
ES.31015.1	chr7	-	6482	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-81	-5	-81	5	multi-exon	FALSE	canonical	3	56	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTCGGTTGAGGGGTG	NA	False	NA	-8	True	AATAAA	-21	NA	63588744	63536093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63541546_63587714
ES.31015.2	chr7	-	4021	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	2375	0	-2375	multi-exon	FALSE	canonical	3	56	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAGTAGGATCTTTGA	NA	False	NA	0	True	AATAAA	-40	NA	63588663	63538473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63541546_63587714
ES.31015.3	chr7	-	1511	1	ISM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	48452	2602	34407	2430	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGGTTCTCCTTTAAT	NA	False	NA	NA	False	AATGAA	-15	NA	63540211	63538700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_63538700_63540200
ES.31015.4	chr7	-	3161	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-546	3781	-546	1251	multi-exon	FALSE	canonical	3	56	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCAGGCATTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	63589209	63539879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63541546_63587714
ES.31015.5	chr7	-	1604	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-162	4954	-162	78	multi-exon	FALSE	canonical	3	56	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCGGTGTTGAACCCCC	NA	False	NA	NA	False	AATACA	-20	NA	63588825	63541052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63541546_63587714
ES.31015.6	chr7	-	4745	1	Intergenic	novelGene_25505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTCCAATGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	63557105	63552360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63552400_63557100
ES.31015.7	chr7	-	6840	1	FSM	ENSMUSG00000052040.11	ENSMUST00000183907.2	934	1	-2702	-3204	-119	3204	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGTGGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	63588782	63581942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63581900_63588800
ES.31016.1	chr7	+	179	1	Intergenic	novelGene_25507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTACATATAAATAATT	NA	False	NA	NA	False	NA	NA	NA	63596267	63596446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_63596300_63596400
ES.31017.1	chr7	-	170	1	Intergenic	novelGene_25508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	63627255	63627085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63627100_63627300
ES.31018.1	chr7	-	206	1	Intergenic	novelGene_25509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAGAGTATCAAGGTAA	NA	False	NA	NA	False	AAGAAA	-5	NA	63647743	63647537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63647500_63647700
ES.31019.1	chr7	-	179	1	Intergenic	novelGene_25510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	63658714	63658535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63658500_63658700
ES.3102.1	chr10	-	4297	1	Intergenic	novelGene_2437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	74945512	74941215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_74941200_74945500
ES.31020.1	chr7	-	157	1	Intergenic	novelGene_25511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	63659461	63659304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63659300_63659500
ES.31021.1	chr7	-	417	1	Intergenic	novelGene_25512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAGAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	63702347	63701930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63701900_63702300
ES.31022.1	chr7	-	4427	1	Antisense	novelGene_ENSMUSG00000108620.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTAAATTTTAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	63716371	63711944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_63711900_63716400
ES.31023.1	chr7	-	2953	1	Intergenic	novelGene_25513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	63723058	63720105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63720100_63723100
ES.31024.1	chr7	+	1878	10	NNC	ENSMUSG00000030523.19	novel	366	4	NA	NA	3658	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	255.187270861766	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63807333	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63807463_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.10	chr7	+	2915	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-37	0	intron_retention	FALSE	canonical	3	724	junction_5	67.1405940918011	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835169	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63859778_63860585
ES.31024.11	chr7	+	1859	13	ISM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	-19	4486	-19	-6	5prime_fragment	FALSE	canonical	3	50	junction_12	327.514503495647	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAATCTTCTGTTTTT	NA	False	NA	NA	False	ACTAAA	-10	NA	63835187	63870098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989
ES.31024.12	chr7	+	1488	8	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-8	966	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	281.817425338622	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACATGAGGAATCGTATT	NA	False	NA	NA	False	NA	NA	NA	63835198	63859043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858097_63858199_63858616
ES.31024.13	chr7	+	1534	8	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	378.76668818896	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGAGTTTTCAGACTA	NA	False	NA	28	True	ATTAAA	-25	NA	63835202	63861177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.14	chr7	+	2774	14	NNC	ENSMUSG00000030523.19	novel	2928	14	NA	NA	0	6	intron_retention	FALSE	canonical	3	45	junction_13	370.655041464855	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGATGAATTGGCTGAA	NA	False	NA	19	True	AATAAA	-24	NA	63835206	63874518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849019_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.15	chr7	+	2179	4	ISM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	79	7802	1	1540	intron_retention	FALSE	canonical	3	741	junction_3	69.0362223763728	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGGGTGCTGGAGAGAC	NA	False	NA	NA	False	NA	NA	NA	63835207	63853373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634
ES.31024.16	chr7	+	782	3	ISM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	79	11727	1	417	5prime_fragment	FALSE	canonical	3	864	junction_1	19.5	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAAAAGGGTTTATT	NA	False	NA	NA	False	NA	NA	NA	63835207	63849448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910
ES.31024.18	chr7	+	2135	11	NNC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	330.308280247408	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGAGTTTTCAGACTA	NA	False	NA	28	True	ATTAAA	-25	NA	63835207	63861177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849107_63849497_63849718_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.19	chr7	+	1738	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	271.883678022422	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAGGACTGAGTTTTCA	NA	False	NA	23	True	ATTAAA	-20	NA	63835207	63861172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.2	chr7	+	3008	14	FSM	ENSMUSG00000030523.19	ENSMUST00000177102.8	2928	14	-75	-5	3	5	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCCTGCCTGTATATAGG	NA	False	NA	90	True	ATTAAA	-17	NA	63835131	63874589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.20	chr7	+	2003	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTTTTCAGACTATG	NA	False	NA	30	True	ATTAAA	-27	NA	63835207	63861179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.21	chr7	+	2892	12	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	342.407470761165	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTCTTTGACTCA	NA	False	NA	NA	False	NA	NA	NA	63835207	63868482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63844359_63844583_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ES.31024.22	chr7	+	2904	10	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	52	junction_1	315.23042718339	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835207	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.23	chr7	+	2089	10	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	255.57386407847	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACTGAGTTTTCAGA	NA	False	NA	25	True	ATTAAA	-22	NA	63835207	63861174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847282_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.24	chr7	+	1963	10	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	261.52010521583	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835207	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851584_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.25	chr7	+	5600	24	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	1	171	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	388.302709659516	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCATTTTTTTTTTGT	NA	False	NA	NA	False	AATACA	-24	NA	63835207	63919694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.26	chr7	+	3307	16	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	2	-955	intron_retention	FALSE	canonical	0	0	junction_14	379.611532432243	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATCAATTCATAA	NA	False	NA	NA	False	NA	NA	NA	63835208	63880073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438_63874404_63876463_63876757_63879804
ES.31024.27	chr7	+	535	4	ISM	ENSMUSG00000030523.19	ENSMUST00000205690.2	441	5	-139	2573	3	86	5prime_fragment	FALSE	canonical	3	52	junction_1	397.676864915334	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGTGCTGTACAAAGC	NA	False	NA	15	True	AATAAA	-18	NA	63835209	63849117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910
ES.31024.28	chr7	+	1788	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	357.440532641445	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACTGAGTTTTCAGA	NA	False	NA	25	True	ATTAAA	-22	NA	63835209	63861174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851584_63851849_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.29	chr7	+	2749	12	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	330.637800881721	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTCTTTGACTCA	NA	False	NA	NA	False	NA	NA	NA	63835213	63868482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ES.31024.3	chr7	+	2060	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	3	-71	3	71	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGATATGATCATTGT	NA	False	NA	97	True	NA	NA	NA	63835131	63861246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.30	chr7	+	1855	9	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	357.433713260235	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTTTTCAGACTATGT	NA	False	NA	31	True	ATTAAA	-28	NA	63835214	63861180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851965_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.31	chr7	+	2128	11	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	316.822600203963	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACTGAGTTTTCAGA	NA	False	NA	25	True	ATTAAA	-22	NA	63835214	63861174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63844359_63844583_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.32	chr7	+	6456	26	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_15	364.594736111206	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	63835214	63919506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438_63874404_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.33	chr7	+	5413	24	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	388.302709659516	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGGAGGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	63835220	63919520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.34	chr7	+	1422	7	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	30	9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	316.001802034243	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTCAGACTATGTTTCA	NA	False	NA	35	True	ATTAAA	-32	NA	63835236	63861184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63859704_63859778_63860585
ES.31024.35	chr7	+	6328	6	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	42	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	431.719816547723	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGACTGAGTTTTCAGA	NA	False	NA	25	True	ATTAAA	-22	NA	63835248	63861174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63850796_63850981_63852879_63858023_63859778_63860585
ES.31024.36	chr7	+	1789	12	NIC	ENSMUSG00000030523.19	novel	2575	11	NA	NA	42	-926	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	330.637800881721	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGTGTGTTCACTTCAA	NA	False	NA	NA	False	NA	NA	NA	63835248	63867557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ES.31024.37	chr7	+	5670	12	ISM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	-48	1540	43	1	intron_retention	FALSE	canonical	3	51	junction_11	291.294006713333	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTGTTTGAATGGTTT	NA	False	NA	NA	False	NA	NA	NA	63835249	63872972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855
ES.31024.38	chr7	+	2772	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-43	1	intron_retention	FALSE	canonical	3	724	junction_4	67.9014681358216	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACTGAGTTTTCAGACT	NA	False	NA	27	True	ATTAAA	-24	NA	63835254	63861176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.39	chr7	+	5408	24	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	-36	162	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	388.447172790779	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTTACTGATGCATTT	NA	False	NA	NA	False	AATACA	-15	NA	63835261	63919685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63887403_63887533_63890167_63890420_63893170_63893346_63894597_63894619_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.4	chr7	+	2710	8	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	7	-8	intron_retention	FALSE	canonical	3	11	junction_4	289.884424541638	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTAGAGGACTGAGT	NA	False	NA	18	True	ATTAAA	-15	NA	63835135	63861167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.40	chr7	+	1517	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	162	313	-7	225	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGCGGAACTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	63835290	63860862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.41	chr7	+	2415	14	FSM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	0	350	0	-350	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCACTCTCACTCCACA	NA	False	NA	NA	False	AATAAA	-21	NA	63835297	63874162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.42	chr7	+	3666	13	NIC	ENSMUSG00000030523.19	novel	2928	14	NA	NA	1	-3	intron_retention	FALSE	canonical	3	45	junction_12	359.777583685007	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAAAATCTTAGATGAA	NA	False	NA	10	True	AATAAA	-15	NA	63835298	63874509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.43	chr7	+	5416	25	NNC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	385.590994358732	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGGAGGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	63835300	63919520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63894941_63895025_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.44	chr7	+	1686	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	276.488669523726	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTCTAGAGGACTGAG	NA	False	NA	17	True	ATTAAA	-14	NA	63835301	63861166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63859704_63859778_63860585
ES.31024.45	chr7	+	5521	25	NIC	ENSMUSG00000030523.19	novel	5493	27	NA	NA	0	166	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	385.624565549908	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTACTGATGCATTTTTTT	NA	False	NA	NA	False	AATACA	-19	NA	63835302	63919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63894597_63894619_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.46	chr7	+	794	4	ISM	ENSMUSG00000030523.19	ENSMUST00000205690.2	441	5	-45	2220	1	439	5prime_fragment	FALSE	canonical	3	52	junction_1	397.676864915334	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTTTCTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	63835303	63849470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910
ES.31024.47	chr7	+	1722	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	175	95	1	-95	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACCGAACCTTTCATCA	NA	False	NA	-69	True	NA	NA	NA	63835303	63861080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.48	chr7	+	343	3	ISM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	184	12061	10	83	5prime_fragment	FALSE	canonical	3	864	junction_1	19.5	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGGGGTGCTGTACAA	NA	False	NA	12	True	AATAAA	-15	NA	63835312	63849114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910
ES.31024.49	chr7	+	6508	8	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_4	400.611267633727	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835327	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63850796_63850981_63852879_63854169_63854342_63858023_63859778_63860585
ES.31024.5	chr7	+	1874	10	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_3	242.01882387763	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835158	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63835372_63847024_63847105_63848910_63849019_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.51	chr7	+	1916	9	NNC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	-1988	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	264.466443996209	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTCCTTCTAGAGGAC	NA	False	NA	13	True	ATTAAA	-10	NA	63847021	63861162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63847282_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.52	chr7	+	3991	7	NNC	ENSMUSG00000030523.19	novel	366	4	NA	NA	826	0	intron_retention	FALSE	non_canonical	0	0	junction_1	302.022304180043	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63849835	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63850796_63850981_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.53	chr7	+	6688	8	ISM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	17365	1	-147	-1	intron_retention	FALSE	canonical	3	51	junction_7	333.780020433843	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAATCTTAGATGAATT	NA	False	NA	12	True	AATAAA	-17	NA	63852662	63874511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855
ES.31024.54	chr7	+	2552	4	ISM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	21305	0	-3337	0	3prime_fragment	FALSE	canonical	3	756	junction_2	62.744632351213	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63856433	63861175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63858199_63858616_63858741_63859704_63859778_63860585
ES.31024.55	chr7	+	2762	7	NIC	ENSMUSG00000030523.19	novel	2928	14	NA	NA	-2186	1	intron_retention	FALSE	canonical	3	45	junction_6	363.888108565745	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCTTAGATGAATTGG	NA	False	NA	14	True	AATAAA	-19	NA	63857584	63874513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.56	chr7	+	3961	18	NNC	ENSMUSG00000030523.19	novel	5076	27	NA	NA	-1745	126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	303.578473007156	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATTGTAATGAGGGTA	NA	False	NA	NA	False	AATACA	-24	NA	63858025	63919006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869987_63870041_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.57	chr7	+	2760	4	ISM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	30608	3	-3717	-3	3prime_fragment	FALSE	canonical	3	45	junction_3	2.62466929133727	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAAAATCTTAGATGAA	NA	False	NA	10	True	AATAAA	-15	NA	63865905	63874509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.58	chr7	+	4658	4	ISM	ENSMUSG00000030523.19	ENSMUST00000206848.2	795	5	1040	-4236	1040	2481	3prime_fragment	FALSE	canonical	0	0	junction_1	2.94392028877595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGTTCCTCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	63895811	63922004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63895837_63897109_63897313_63897933_63898067_63917707
ES.31024.6	chr7	+	2102	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-144	617	30	-617	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGTGGTACCTTGGT	NA	False	NA	NA	False	AGTAAA	-15	NA	63835158	63867866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ES.31024.7	chr7	+	2717	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	-143	1	31	-1	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTCTTTGACTCA	NA	False	NA	NA	False	NA	NA	NA	63835159	63868482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ES.31024.8	chr7	+	2982	15	NIC	ENSMUSG00000030523.19	novel	2928	14	NA	NA	-38	2	intron_retention	FALSE	canonical	3	45	junction_14	369.963318645048	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTTAGATGAATTGGC	NA	False	NA	15	True	AATAAA	-20	NA	63835168	63874514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ES.31024.9	chr7	+	3083	20	ISM	ENSMUSG00000030523.19	ENSMUST00000206263.2	5493	27	-130	31786	-37	-4607	5prime_fragment	FALSE	canonical	0	0	junction_14	393.393609322718	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAATAAATGACATAA	NA	False	NA	NA	False	NA	NA	NA	63835169	63887719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438_63873580_63874373_63874404_63876463_63876757_63879804_63880034_63884705_63884829_63885493_63885626_63887403
ES.31025.1	chr7	-	744	2	Antisense	novelGene_ENSMUSG00000030523.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGCCTCCTCATTTAC	NA	False	NA	NA	False	NA	NA	NA	63834936	63804632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_63805340_63834899
ES.31025.2	chr7	-	2825	2	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-1380	25907	multi-exon	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTAGACTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	63853652	63825929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_63826003_63850900
ES.31025.3	chr7	-	3482	1	Intergenic	novelGene_25514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	63832146	63828664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63828700_63832100
ES.31025.4	chr7	-	3689	2	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-1379	2060	multi-exon	TRUE	canonical	3	8	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAATTCTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	63853651	63849776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_63850803_63850988
ES.31025.5	chr7	-	2847	1	FSM	ENSMUSG00000108645.2	ENSMUST00000206473.2	436	1	-1381	-1030	-1381	1030	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAACACTTATTAAGC	NA	False	NA	NA	False	NA	NA	NA	63853653	63850806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_63850800_63853700
ES.31025.6	chr7	-	1939	2	Genic_Genomic	ENSMUSG00000108645.2	novel	436	1	NA	NA	-1379	1030	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAACACTTATTAAGC	NA	False	NA	NA	False	NA	NA	NA	63853651	63850806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_63851846_63852751
ES.31026.1	chr7	-	228	1	Intergenic	novelGene_25515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACAGATGGTTCCAGAA	9484	False	NA	NA	False	AAAAAG	-35	NA	63913932	63913704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_63913700_63913900
ES.31027.1	chr7	+	4990	16	NNC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	-177	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.6831471734039	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTCGTCACCAGTATG	533	False	NA	8	True	AATAAA	-18	NA	63937223	63990154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970374_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.11	chr7	+	4837	17	NNC	ENSMUSG00000030522.15	novel	2477	17	NA	NA	7	-530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.7137614229728	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAAACCCTTTGTGCC	717	False	NA	NA	False	ATTAAA	-16	NA	63937407	63990024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63959767_63959929_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970374_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.13	chr7	+	4676	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	3	526	3	-526	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCCTTTGTGCCTAAA	730	False	NA	NA	False	ATTAAA	-20	NA	63937420	63990028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.14	chr7	+	5276	15	NNC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	3	-399	intron_retention	FALSE	canonical	0	0	junction_8	12.8642837312603	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	730	False	NA	9	True	AATAAA	-19	NA	63937420	63990155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969186_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.15	chr7	+	5005	4	NIC	ENSMUSG00000030522.15	novel	3093	5	NA	NA	13	0	intron_retention	FALSE	canonical	3	43	junction_2	1.88561808316413	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	740	False	NA	NA	False	NA	NA	NA	63937430	63952920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63937590_63938086_63938148_63947207_63949360_63950287
ES.31027.16	chr7	+	3883	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	13	1309	13	-1309	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATACAAATAGCATTATCA	740	False	NA	NA	False	TATAAA	-19	NA	63937430	63989245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.17	chr7	+	4827	17	FSM	ENSMUSG00000030522.15	ENSMUST00000206452.2	2477	17	-99	-2251	13	-526	multi-exon	FALSE	canonical	0	0	junction_6	15.2938662132896	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCCTTTGTGCCTAAA	740	False	NA	NA	False	ATTAAA	-20	NA	63937430	63990028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63959767_63959929_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.18	chr7	+	5023	18	NNC	ENSMUSG00000030522.15	novel	2477	17	NA	NA	14	-401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	17.6737053724366	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTCGTCACCAGTAT	741	False	NA	7	True	AATAAA	-17	NA	63937431	63990153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63984363_63984492_63984849_63984955_63986459_63986643_63987180
ES.31027.19	chr7	+	4437	14	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	14	-526	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.5243231158759	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACCCTTTGTGCCTAAA	741	False	NA	NA	False	ATTAAA	-20	NA	63937431	63990028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63937590_63938086_63938148_63949286_63949360_63950287_63950431_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.2	chr7	+	5400	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-193	-2	-176	2	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGCCTTTGTTAAT	534	False	NA	7	True	AATAAA	-19	NA	63937224	63990556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.20	chr7	+	4804	16	NNC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	14	-399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.5797014626297	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	741	False	NA	9	True	AATAAA	-19	NA	63937431	63990155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957863_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.21	chr7	+	4092	15	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	27	-1166	intron_retention	FALSE	canonical	3	34	junction_5	6.0326492640346	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCTAGATTTATTTTG	754	False	NA	NA	False	NA	NA	NA	63937444	63989388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.23	chr7	+	2501	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	53	2651	53	126	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCTGCCTTCAGTTA	780	False	NA	NA	False	AAGAAA	-27	NA	63937470	63987903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.24	chr7	+	7691	17	NNC	ENSMUSG00000030522.15	novel	2477	17	NA	NA	56	2736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	12.3678956880304	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAGTGCATTTAACATG	783	False	NA	NA	False	AAAAAG	-16	NA	63937473	63993290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180_63992679_63992872
ES.31027.25	chr7	+	5180	13	NNC	ENSMUSG00000030522.15	novel	668	7	NA	NA	-582	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.203628253216	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTTGCCTTTGTTAA	NA	False	NA	6	True	AATAAA	-18	NA	63949798	63990555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63949901_63949972_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.26	chr7	+	6478	11	ISM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	18600	-1	5637	1	3prime_fragment	FALSE	canonical	3	39	junction_8	5.94053869611166	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCTTGCCTTTGTTAA	NA	False	NA	6	True	AATAAA	-18	NA	63956017	63990555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.27	chr7	+	4869	1	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	34906	-399	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	NA	False	NA	9	True	AATAAA	-19	NA	63985286	63990155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63985300_63990200
ES.31027.28	chr7	+	3373	1	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	36798	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATTGGTCTTGCCTTTG	NA	False	NA	2	True	AATAAA	-14	NA	63987178	63990551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63987200_63990600
ES.31027.3	chr7	+	4999	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-193	399	-176	-399	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	534	False	NA	9	True	AATAAA	-19	NA	63937224	63990155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.4	chr7	+	2636	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	-190	2759	-173	18	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTGAGAGAAGCTGGA	537	False	NA	NA	False	ACTAAA	-18	NA	63937227	63987795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.5	chr7	+	5298	15	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	-168	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	11.7014302282992	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGGTCTTGCCTTTGTT	542	False	NA	4	True	AATAAA	-16	NA	63937232	63990553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.7	chr7	+	5068	16	NNC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	-166	-399	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	12.533687938246	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCGTCACCAGTATGA	544	False	NA	9	True	AATAAA	-19	NA	63937234	63990155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987101
ES.31027.8	chr7	+	7171	15	NIC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	34	junction_4	6.0911444586651	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGGTCTTGCCTTTGTT	702	False	NA	4	True	AATAAA	-16	NA	63937392	63990553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_63937590_63938086_63938148_63947207_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31027.9	chr7	+	4423	14	NNC	ENSMUSG00000030522.15	novel	5205	16	NA	NA	2	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.8407086387605	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGTCGTCACCAGTATG	712	False	NA	8	True	AATAAA	-18	NA	63937402	63990154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_63937590_63938086_63938148_63947324_63947345_63949286_63949360_63950287_63950431_63967846_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ES.31028.1	chr7	+	7136	1	Antisense	novelGene_ENSMUSG00000033458.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCTGCTACCTCCTCA	NA	False	NA	NA	False	AGTAAA	-19	NA	64016231	64023367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_64016200_64023400
ES.31029.1	chr7	-	5481	14	Fusion	ENSMUSG00000092187.2_ENSMUSG00000033458.18	novel	3460	14	NA	NA	-8	1875	intron_retention	TRUE	non_canonical	0	0	junction_1	6.88536738480008	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGGCTTTGTTTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	64023851	63994630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_63996331_63996387_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266_64021408_64022008
ES.31029.2	chr7	-	3990	14	Fusion	ENSMUSG00000092187.2_ENSMUSG00000033458.18	novel	3460	14	NA	NA	749	1864	multi-exon	TRUE	non_canonical	0	0	junction_1	6.88536738480008	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAACAACGCTCAGTGGG	NA	False	NA	NA	False	AATAAA	-18	NA	64022372	63994641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_63996282_63996339_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266_64021408_64022008
ES.31029.3	chr7	-	3579	9	Fusion	ENSMUSG00000092187.2_ENSMUSG00000033458.18	novel	3460	14	NA	NA	6781	1494	intron_retention	TRUE	non_canonical	0	0	junction_1	7.34421541078419	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	64016340	63995011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_63996326_63996384_63996644_63998595_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302
ES.31029.4	chr7	-	2701	14	NNC	ENSMUSG00000033458.18	novel	3460	14	NA	NA	749	575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.88536738480008	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGGCAATGGTGATCC	NA	False	NA	NA	False	AATACA	-19	NA	64022372	63995930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_63996282_63996339_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266_64021408_64022008
ES.31029.5	chr7	-	2277	13	NNC	ENSMUSG00000033458.18	novel	3460	14	NA	NA	1711	512	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.91767060987054	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGCGTGATGAATTT	NA	False	NA	NA	False	TTTAAA	-17	NA	64021410	63995993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_63996398_63996455_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266
ES.31029.6	chr7	-	4080	14	NNC	ENSMUSG00000033458.18	novel	3460	14	NA	NA	-31	452	intron_retention	TRUE	non_canonical	0	0	junction_1	6.88536738480008	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCGTAGGAGCTGAAGG	NA	False	NA	NA	False	AATATA	-13	NA	64023874	63996053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_63996232_63996289_63996644_63998595_63998725_63999064_63999260_63999782_63999887_64003323_64003475_64004118_64004284_64011687_64011808_64012879_64012989_64014277_64014410_64016302_64016537_64018767_64018970_64021266_64021408_64022008
ES.31029.7	chr7	-	3783	2	NIC	ENSMUSG00000033458.18	novel	3162	3	NA	NA	2	37	intron_retention	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTATTTTTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	64023826	64019863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64023503_64023682
ES.3103.1	chr10	+	6437	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	-30	-1682	-30	2	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTTTCAAGGTGTATA	NA	False	NA	NA	False	TATAAA	-16	NA	75047874	75148579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.10	chr10	+	4731	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	2	-8	2	8	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGATGGATGGTGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	75047906	75146905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.11	chr10	+	6076	16	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	5	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.4041320550219	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCATGCGTCGATTTCCT	NA	False	NA	18	True	AATAAA	-1	NA	75047909	75148213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066746_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.12	chr10	+	5959	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	7	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.25	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCATGCGTCGATTTCC	NA	False	NA	17	True	AGTAAA	-19	NA	75047911	75148212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75081270_75081343_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.13	chr10	+	5124	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	10	-409	10	409	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCAGCCTCTGCTGTA	NA	False	NA	NA	False	NA	NA	NA	75047914	75147306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.17	chr10	+	4518	16	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.7153181476035	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTAGTTTGTTCTCCCT	NA	False	NA	32	True	AATAAA	-15	NA	75047920	75148227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75081026_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.18	chr10	+	9698	14	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	8	-9	intron_retention	FALSE	canonical	3	164	junction_1	14.7836468105049	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTCCTAGTTTGTTCTC	NA	False	NA	29	True	AATAAA	-12	NA	75047934	75148224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.19	chr10	+	6210	18	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	9	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.3513931737554	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGTCATGCGTCGA	NA	False	NA	12	True	AGTAAA	-14	NA	75047935	75148207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75064588_75064673_75066515_75066706_75076898_75077053_75080199_75080322_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.2	chr10	+	3248	1	Genic_Genomic	ENSMUSG00000033444.15	novel	NA	NA	NA	NA	-30	-28628	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGTTATGATTATCCT	NA	False	NA	NA	False	NA	NA	NA	75047874	75051122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_75047900_75051100
ES.3103.20	chr10	+	6028	16	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	47.6073757124064	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75047935	75148225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103430_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.21	chr10	+	6032	18	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.118839088925	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75047935	75148225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75064588_75064673_75066515_75066706_75076898_75077053_75080912_75081270_75081343_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.22	chr10	+	6220	18	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	23	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.3888421394192	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCATGCGTCGATTTCCT	NA	False	NA	18	True	AATAAA	-1	NA	75047949	75148213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75063601_75063769_75064708_75064766_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.23	chr10	+	4463	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	47.25	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTCCTAGTTTGTTCTC	NA	False	NA	29	True	AATAAA	-12	NA	75047952	75148224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623_75146465_75148005
ES.3103.24	chr10	+	2200	5	ISM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	49	62503	27	3429	5prime_fragment	FALSE	canonical	3	164	junction_1	14.0956553590104	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATCTTTGAACTTGAA	NA	False	NA	NA	False	NA	NA	NA	75047953	75084394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270
ES.3103.25	chr10	+	6503	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	68	-1846	46	166	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTACTTCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	75047972	75148743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.26	chr10	+	8617	15	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	46	-26	intron_retention	FALSE	canonical	3	164	junction_1	14.273744985755	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGTCATGCGTCGA	NA	False	NA	12	True	AGTAAA	-14	NA	75047972	75148207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.27	chr10	+	5957	16	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	48	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.7612778977564	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAACTGTCATGCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	75047974	75148205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094807_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.28	chr10	+	6188	17	NNC	ENSMUSG00000033444.15	novel	6632	18	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	61.2238464570791	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75048218	75148225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048324_75064588_75064766_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.29	chr10	+	2854	4	NIC	ENSMUSG00000033444.15	novel	6632	18	NA	NA	8	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	86.526810231794	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCATGCGTCG	NA	False	NA	11	True	AGTAAA	-13	NA	75048229	75148206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75048324_75143070_75143188_75143867_75143928_75145623
ES.3103.3	chr10	+	6087	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	-25	-1337	-25	1	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTCCCTCCCTGCT	NA	False	NA	39	True	AATAAA	-22	NA	75047879	75148234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.30	chr10	+	8514	14	NNC	ENSMUSG00000033444.15	novel	5928	16	NA	NA	903	0	intron_retention	FALSE	canonical	2	5	junction_9	49.2815843516928	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTCTCCCTCCCTGC	5512	False	NA	38	True	AATAAA	-21	NA	75066591	75148233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103430_75109850_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.31	chr10	+	3648	10	ISM	ENSMUSG00000033444.15	ENSMUST00000040105.8	5928	16	29112	7	-2000	-7	3prime_fragment	FALSE	canonical	3	175	junction_4	14.0457805271649	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTAGTTTGTTCTCCC	NA	False	NA	31	True	AATAAA	-14	NA	75094800	75148226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.32	chr10	+	3124	6	ISM	ENSMUSG00000033444.15	ENSMUST00000040105.8	5928	16	44160	9	13048	-9	3prime_fragment	FALSE	canonical	3	175	junction_2	16.4268073587049	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTTCCTAGTTTGTTCTC	NA	False	NA	29	True	AATAAA	-12	NA	75109848	75148224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.33	chr10	+	5199	2	NIC	ENSMUSG00000033444.15	novel	737	5	NA	NA	1877	-8	intron_retention	FALSE	canonical	3	186	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75141330	75148225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75143928_75145623
ES.3103.4	chr10	+	6254	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	60.4014887544173	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTAGTTTGTTCTCCCT	NA	False	NA	32	True	AATAAA	-15	NA	75047882	75148227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75064588_75064766_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.5	chr10	+	6180	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-20	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.7215759826712	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTAGTTTGTTCTCCC	NA	False	NA	31	True	AATAAA	-14	NA	75047884	75148226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75074105_75074212_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.6	chr10	+	6158	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-19	-6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	61.3715312156215	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTAGTTTGTTCTCCCT	NA	False	NA	32	True	AATAAA	-15	NA	75047885	75148227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75064588_75064673_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.7	chr10	+	2935	10	ISM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	-18	43487	-18	-2782	5prime_fragment	FALSE	canonical	3	164	junction_1	13.2506696779287	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTGTACAAGGTACAGG	NA	False	NA	NA	False	NA	NA	NA	75047886	75103410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332
ES.3103.8	chr10	+	6189	16	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	48.4752399570016	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCCTAGTTTGTTCTCC	NA	False	NA	30	True	AATAAA	-13	NA	75047886	75148225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082665_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.3103.9	chr10	+	5851	15	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	0	-20	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	49.5421898126089	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCATGCGTCGATTTCCT	NA	False	NA	18	True	AATAAA	-1	NA	75047904	75148213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75048052_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ES.31030.1	chr7	+	1446	4	NNC	ENSMUSG00000033429.11	novel	532	3	NA	NA	-966	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.254451832643	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64041388	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_64041560_64041778_64042592_64049916_64050093_64061582
ES.31030.2	chr7	+	401	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	-11	1	-11	-1	multi-exon	FALSE	canonical	3	49	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64042476	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_64042592_64061582
ES.31030.3	chr7	+	793	4	NNC	ENSMUSG00000033429.11	novel	532	3	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	40.2022663816634	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64042481	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_64042592_64048440_64048662_64049916_64050093_64061582
ES.31030.4	chr7	+	2203	3	NIC	ENSMUSG00000033429.11	novel	828	3	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	88	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64042488	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_64042592_64048440_64050255_64061582
ES.31030.5	chr7	+	477	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206138.2	327	2	135	-285	2	285	multi-exon	FALSE	canonical	3	27	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACGACAACAAAAAAA	NA	False	NA	NA	False	TATAAA	-11	NA	64042489	64048815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_64042592_64048440
ES.31030.6	chr7	+	715	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	111	2	16	-2	multi-exon	FALSE	canonical	3	203	junction_2	55.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATTTGTTATTTGAAT	NA	False	NA	23	True	ATTAAA	-24	NA	64042503	64061871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_64042592_64049916_64050255_64061582
ES.31030.7	chr7	+	912	4	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	84.9156444164835	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCATGTATTTGTTATT	NA	False	NA	18	True	ATTAAA	-19	NA	64042522	64061866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_64042592_64048440_64048662_64049916_64050255_64061582
ES.31030.8	chr7	+	458	3	NNC	ENSMUSG00000033429.11	novel	828	3	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64042527	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_64042592_64059640_64059749_64061582
ES.31030.9	chr7	+	3543	1	NIC	ENSMUSG00000033429.11	novel	828	3	NA	NA	15803	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATTTGTTATTTG	NA	False	NA	20	True	ATTAAA	-21	NA	64058325	64061868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_64058300_64061900
ES.31031.1	chr7	-	2537	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	-291	2	-291	-2	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAACGGGCTTATTTCA	NA	False	NA	-5	True	NA	NA	NA	64042307	64026276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.12	chr7	-	5115	9	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	15	-55	intron_retention	FALSE	canonical	3	635	junction_4	64.0447841357905	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTAGTTTGTTTCCTGTT	NA	False	NA	-6	True	AATAAA	-14	NA	64042001	64026329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.14	chr7	-	4265	1	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	15	30	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTTTTGGGCCAGTGA	NA	False	NA	NA	False	NA	NA	NA	64041969	64037704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64037700_64042000
ES.31031.2	chr7	-	2007	11	NNC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	221.956775071184	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTACAGGAACGGGCTT	NA	False	NA	-11	True	NA	NA	NA	64041970	64026282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039693_64041853
ES.31031.3	chr7	-	4042	10	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	16	-8	intron_retention	FALSE	canonical	3	643	junction_6	59.1758208880771	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTACAGGAACGGGCTT	NA	False	NA	-11	True	NA	NA	NA	64041968	64026282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.4	chr7	-	3497	10	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	14	-14	intron_retention	FALSE	canonical	3	635	junction_4	65.0067422903954	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTCTTGTACAGGAAC	NA	False	NA	-17	True	NA	NA	NA	64041970	64026288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.6	chr7	-	6626	8	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	4	-50	intron_retention	FALSE	canonical	3	643	junction_4	42.0660316693667	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTCCTGTTGTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	64042012	64026324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.7	chr7	-	1315	5	FSM	ENSMUSG00000030521.12	ENSMUST00000206047.2	695	5	79	-699	79	-50	multi-exon	FALSE	canonical	3	635	junction_3	81.6957006212689	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTCCTGTTGTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	64034188	64026324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049
ES.31031.8	chr7	-	2156	11	NNC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	2	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	223.36973832639	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTCCTGTTGTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	64041982	64026324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032646_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31031.9	chr7	-	5320	9	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	4	-51	intron_retention	FALSE	canonical	3	643	junction_5	62.765311876864	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTTTCCTGTTGTTT	NA	False	NA	-2	True	AATAAA	-18	NA	64041980	64026325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64032777_64034049_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ES.31032.1	chr7	+	3349	15	FSM	ENSMUSG00000030519.15	ENSMUST00000032732.15	3321	15	-39	11	-39	9	multi-exon	TRUE	canonical	0	0	junction_1	1.24539969815448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGTCAAAACTCCATATT	NA	False	NA	NA	False	AATAAA	-13	NA	64151414	64403615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_64151567_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64384402_64384439_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
ES.31032.2	chr7	+	3297	14	NIC	ENSMUSG00000030519.15	novel	3027	12	NA	NA	-16	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.27794213275663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAACTCCATATTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	64151869	64403619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_64152002_64203394_64203520_64284778_64284833_64344771_64345766_64364178_64364260_64365258_64365296_64383260_64383407_64386628_64386716_64389446_64389633_64393007_64393188_64394163_64394377_64395445_64395566_64399850_64399992_64402818
ES.31033.1	chr7	+	169	1	Intergenic	novelGene_25516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATTAAACT	NA	False	NA	NA	False	TATAAA	-28	NA	64460135	64460304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_64460100_64460300
ES.31034.1	chr7	+	168	1	Intergenic	novelGene_25518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAACGTTCTTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	64478784	64478952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_64478800_64479000
ES.31035.1	chr7	+	355	2	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGTATGTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	64714670	64721150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_64714843_64720967
ES.31035.2	chr7	+	875	5	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	64714671	64723192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_64714843_64720967_64721064_64721689_64721741_64722314_64722419_64722739
ES.31035.3	chr7	+	2120	2	Antisense	novelGene_ENSMUSG00000030518.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTGTTTTCTCTGGT	NA	False	NA	NA	False	ATTAAA	-38	NA	64721705	64724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_64721741_64722314
ES.31036.1	chr7	-	4411	8	NNC	ENSMUSG00000030518.18	novel	4801	10	NA	NA	16440	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.1946130708196	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGACTAAGAGGGTCC	NA	False	NA	NA	False	AATAAA	-25	NA	64489705	64405833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64409162_64411500_64411729_64417399_64417476_64425451_64425588_64426460_64426622_64436437_64436546_64469512_64469648_64489466
ES.31036.2	chr7	-	2273	12	NNC	ENSMUSG00000030518.18	novel	4801	10	NA	NA	52	-2634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.74539434009845	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAGGCCTTTAACACT	NA	False	NA	NA	False	CATAAA	-18	NA	64806266	64408494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64409162_64411500_64411729_64417399_64417476_64425451_64425588_64426460_64426622_64436437_64436546_64469512_64469648_64505856_64505968_64633128_64633186_64758192_64758272_64758897_64758999_64805852
ES.31036.3	chr7	-	236	1	Intergenic	novelGene_25517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAACAGTGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	64466597	64466361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_64466400_64466600
ES.31036.4	chr7	-	1554	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-26	4418	-26	-4418	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAAATGTCATGATT	NA	False	NA	NA	False	NA	NA	NA	64522771	64521217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64521200_64522800
ES.31036.5	chr7	-	1427	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-54	4573	-54	-4573	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATGTGTTTTCTAGC	NA	False	NA	59	True	AATATA	-42	NA	64522799	64521372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64521400_64522800
ES.31036.6	chr7	-	1250	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	22	4674	22	-4674	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTTTTAAAATTGAAAAT	NA	False	NA	-42	True	AATAAA	-2	NA	64522723	64521473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64521500_64522700
ES.31036.7	chr7	-	1186	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	-42	4802	-42	-4802	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGAAATTGTATGATG	NA	False	NA	NA	False	TATAAA	-22	NA	64522787	64521601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64521600_64522800
ES.31036.8	chr7	-	159	1	Intergenic	novelGene_25519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64615839	64615680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_64615700_64615800
ES.31037.1	chr7	+	175	1	Intergenic	novelGene_25520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	64953233	64953408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_64953200_64953400
ES.31038.1	chr7	+	2355	1	Antisense	novelGene_ENSMUSG00000030516.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTCTGTGGCAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	64963802	64966157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_64963800_64966200
ES.31039.1	chr7	+	184	1	Intergenic	novelGene_25521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64987925	64988109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_64987900_64988100
ES.3104.1	chr10	+	2381	3	FSM	ENSMUSG00000020178.7	ENSMUST00000105420.3	2596	3	211	4	-14	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGCCTGCTAAGATT	NA	False	NA	NA	False	AATAAA	-19	NA	75152921	75170614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75152982_75161618_75162186_75168860
ES.31040.1	chr7	+	706	1	Intergenic	novelGene_25523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	65002690	65003396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65002700_65003400
ES.31041.1	chr7	-	6906	28	NIC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-111	5	intron_retention	FALSE	canonical	1	4	junction_26	48.3012097023518	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTTTATTTGCTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	65177640	64945907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946_65163080_65177311
ES.31041.10	chr7	-	5684	20	NNC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_14	53.8578204158375	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021014	64945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972347_64986840_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.13	chr7	-	4796	15	NNC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	19641	-1	intron_retention	FALSE	canonical	0	0	junction_3	60.5563070747434	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTAGTTTGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	64972904	64945913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949477_64949562_64950813_64950957_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702
ES.31041.15	chr7	-	6814	28	NIC	ENSMUSG00000030516.15	novel	5938	28	NA	NA	-64	-1	intron_retention	FALSE	canonical	1	4	junction_26	53.5440282661191	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTAGTTTGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	65177593	64945913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946_65163080_65177311
ES.31041.16	chr7	-	6818	28	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-89	-1	intron_retention	FALSE	canonical	1	4	junction_26	52.8973953113669	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTAGTTTGGTTTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	65177618	64945913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946_65163080_65177311
ES.31041.17	chr7	-	14633	25	NNC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-6	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	58.0554691652733	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTAGTTTGGTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	65020993	64945914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64953225_64953426_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64984890_64984988_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.18	chr7	-	6312	25	NNC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-26	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	39.6917812651435	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATTAGTTTGGTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	65021013	64945915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956175_64962446_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.2	chr7	-	6876	27	NIC	ENSMUSG00000030516.15	novel	5938	28	NA	NA	-42	4	intron_retention	FALSE	canonical	3	35	junction_1	34.2514198729572	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGGTTTATTTGCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	65021029	64945908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.20	chr7	-	6599	26	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-26	-8	intron_retention	FALSE	canonical	0	0	junction_5	45.8905480464115	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	False	NA	NA	False	AATAAA	-8	NA	65021013	64945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.21	chr7	-	7989	26	NIC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-26	-8	intron_retention	FALSE	canonical	3	136	junction_1	22.9655742362345	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	False	NA	NA	False	AATAAA	-8	NA	65021013	64945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.22	chr7	-	6292	23	NIC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-40	-8	intron_retention	FALSE	canonical	0	0	junction_21	42.9135446455963	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	False	NA	NA	False	AATAAA	-8	NA	65021027	64945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_65004579_65004637_65020557
ES.31041.23	chr7	-	6879	28	NNC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-27	-8	intron_retention	FALSE	canonical	0	0	junction_5	53.8527433825026	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	False	NA	NA	False	AATAAA	-8	NA	65021014	64945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64957363_64957415_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.25	chr7	-	5235	19	NIC	ENSMUSG00000030516.15	novel	5938	28	NA	NA	13075	-139	intron_retention	FALSE	canonical	3	35	junction_1	39.6372439898527	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCACGATTTCTGTT	NA	False	NA	NA	False	AATAGA	-15	NA	64979470	64946051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373
ES.31041.26	chr7	-	6581	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-260	-219	-36	219	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATACAAGGTCATTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	65021023	64946236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.27	chr7	-	5496	23	NNC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	2538	129	intron_retention	FALSE	non_canonical	0	0	junction_9	49.8109857111929	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAGTTTCTAAGGCTA	NA	False	NA	NA	False	TATAAA	-24	NA	64990007	64946326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964760_64967753_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897
ES.31041.28	chr7	-	5559	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-213	756	11	40	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTAGTATTAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	65020976	64947211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.29	chr7	-	5183	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	73	10	intron_retention	FALSE	canonical	3	43	junction_1	33.0858664117024	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATATTTTCTTAGAAT	NA	False	NA	NA	False	ACTAAA	-24	NA	65020690	64947241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.3	chr7	-	6933	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-285	-546	-61	3	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTGGTTTATTTGCTC	NA	False	NA	NA	False	AATAAA	-19	NA	65021048	64945909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.30	chr7	-	3834	7	NIC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-26	6209	intron_retention	FALSE	canonical	3	145	junction_2	10.5580406431412	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAGTAGTAATCAGAGT	NA	False	NA	NA	False	NA	NA	NA	65021013	64983761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64985928_64986244_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.31	chr7	-	3120	1	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	5664	6209	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAGTAGTAATCAGAGT	NA	False	NA	NA	False	NA	NA	NA	64986881	64983761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64983800_64986900
ES.31041.32	chr7	-	178	1	Intergenic	novelGene_25522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	64993065	64992887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_64992900_64993100
ES.31041.33	chr7	-	133	1	Intergenic	novelGene_25524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	65101283	65101150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65101200_65101300
ES.31041.34	chr7	-	255	1	Intergenic	novelGene_25525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAGAGACGAAT	NA	False	NA	NA	False	NA	NA	NA	65112298	65112043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65112000_65112300
ES.31041.4	chr7	-	6694	28	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	153	1	intron_retention	FALSE	canonical	0	0	junction_9	54.0936798551767	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTTATTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	65020610	64945911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.5	chr7	-	6849	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-39	1	intron_retention	FALSE	canonical	3	43	junction_1	33.0858664117024	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTTTGGTTTATTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	65021026	64945911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.6	chr7	-	6947	28	NNC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_5	49.4876077378561	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021014	64945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64957363_64957415_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.7	chr7	-	6347	25	NNC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	-24	0	intron_retention	FALSE	non_canonical	0	0	junction_5	39.6917812651435	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65021011	64945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956204_64962441_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ES.31041.8	chr7	-	6488	27	NNC	ENSMUSG00000030516.15	novel	6102	27	NA	NA	3097	0	intron_retention	FALSE	canonical	0	0	junction_26	40.0111116223286	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65017666	64945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65017617
ES.31042.1	chr7	+	3290	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	-92	-6	-92	6	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCCATTGTTGGACG	NA	False	NA	17	True	AATAAA	-30	NA	65294553	65341845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ES.31042.10	chr7	+	1581	1	FSM	ENSMUSG00000030515.10	ENSMUST00000206323.2	2711	1	1314	-184	1314	184	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	65310093	65311674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65310100_65311700
ES.31042.11	chr7	+	959	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	38	6	8	-4	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCCAGAACTTTTTATT	NA	False	NA	22	True	AATAAA	-22	NA	65343202	65351655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ES.31042.12	chr7	+	2388	1	NIC	ENSMUSG00000078681.11	novel	1478	7	NA	NA	8	615	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65343202	65345590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65343200_65345600
ES.31042.13	chr7	+	832	5	NIC	ENSMUSG00000078681.11	novel	905	6	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	208.078711068672	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGACAACCCAGAACTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	65343206	65351652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65343318_65344917_65345076_65347443_65347619_65348839_65348916_65351340
ES.31042.14	chr7	+	4502	3	ISM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	52	0	-7	0	intron_retention	FALSE	canonical	3	509	junction_1	12	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343207	65351650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65343318_65344890_65345076_65347443
ES.31042.16	chr7	+	2075	4	NIC	ENSMUSG00000078681.11	novel	908	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	497	junction_3	14.9666295470958	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACGACAACCCAGAACT	NA	False	NA	15	True	AATAAA	-15	NA	65343207	65351648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65343318_65344890_65345076_65347443_65348916_65351340
ES.31042.18	chr7	+	2871	5	NNC	ENSMUSG00000078681.11	novel	1003	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	219.711600740607	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGAACTTTTTATTTG	NA	False	NA	24	True	AATAAA	-24	NA	65343210	65351657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65349329
ES.31042.19	chr7	+	3640	3	NIC	ENSMUSG00000078681.11	novel	905	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	497	junction_2	18	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACGACAACCCAGAACT	NA	False	NA	15	True	AATAAA	-15	NA	65343215	65351648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65345076_65347443_65348916_65351340
ES.31042.2	chr7	+	4421	16	ISM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	-11	3222	-11	-1213	5prime_fragment	FALSE	canonical	3	56	junction_9	8.25159917160843	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCAGGCCTCTCTGGC	NA	False	NA	NA	False	AATAGA	-13	NA	65294634	65338617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185
ES.31042.20	chr7	+	4462	3	FSM	ENSMUSG00000078681.11	ENSMUST00000143508.3	318	3	24	-4168	4	0	multi-exon	FALSE	canonical	3	23	junction_1	255	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACGACAACCCAGAACT	NA	False	NA	15	True	AATAAA	-15	NA	65343218	65351648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65343318_65344917_65345076_65347443
ES.31042.21	chr7	+	764	4	NIC	ENSMUSG00000078681.11	novel	908	5	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	239.202842792472	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACCACGACAACCCAGAA	NA	False	NA	13	True	AATAAA	-13	NA	65343219	65351646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65343318_65344890_65345076_65347443_65347619_65351340
ES.31042.3	chr7	+	3234	19	NNC	ENSMUSG00000030515.10	novel	3192	19	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7200451466693	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGAGCCTCGGTATGT	NA	False	NA	3	True	AATAAA	-16	NA	65294634	65341831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65294963_65295961_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ES.31042.4	chr7	+	2887	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	1	304	1	-304	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGATGTCTTATTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	65294646	65341535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ES.31042.5	chr7	+	3416	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	1	-225	1	225	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTATTTTGTCTGTTGT	NA	False	NA	NA	False	TTTAAA	-20	NA	65294646	65342064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ES.31042.6	chr7	+	10361	20	NIC	ENSMUSG00000030515.10	novel	3192	19	NA	NA	3	9812	intron_retention	FALSE	canonical	3	37	junction_17	137.799947332227	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGACAACCCAGAACTTTT	NA	False	NA	18	True	AATAAA	-18	NA	65294648	65351651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65339831_65340918_65343692_65344890_65345076_65347443_65348916_65351340
ES.31042.7	chr7	+	3408	24	NNC	ENSMUSG00000030515.10	novel	3192	19	NA	NA	3	9818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	166.508377259352	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGAACTTTTTATTTG	NA	False	NA	24	True	AATAAA	-24	NA	65294648	65351657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918_65341039_65343050_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ES.31042.9	chr7	+	3436	19	Fusion	ENSMUSG00000078681.11_ENSMUSG00000030515.10	novel	632	6	NA	NA	343	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	17.7200451466693	85	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCGGTATGTTCCATTG	NA	False	NA	10	True	AATAAA	-23	NA	65294988	65341838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_65295551_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ES.31043.1	chr7	+	282	1	Intergenic	novelGene_25526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	65435771	65436053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65435800_65436100
ES.31044.1	chr7	+	187	1	Intergenic	novelGene_25527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGCTGTGGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	65468461	65468648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65468500_65468600
ES.31045.1	chr7	+	193	1	Intergenic	novelGene_25528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACAAACAAACAAA	NA	False	NA	8	True	NA	NA	NA	65471723	65471916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65471700_65471900
ES.31046.1	chr7	-	3388	2	Antisense	novelGene_ENSMUSG00000100094.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGAGTGGTCATGTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	65474669	65443676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_65446954_65474558
ES.31047.1	chr7	+	176	1	Intergenic	novelGene_25529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	65482332	65482508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65482300_65482500
ES.31048.1	chr7	+	3998	21	Fusion	ENSMUSG00000030513.15_ENSMUSG00000108793.2	novel	619	7	NA	NA	-14	0	multi-exon	FALSE	canonical	1	3	junction_1	48.5984567656217	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGCCAGTGGGTGAA	NA	False	NA	61	True	AATAAA	-13	NA	65511467	65700134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_65511515_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.10	chr7	+	4377	22	NNC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	-2	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1063221276464	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATGGAAATCACTTTA	NA	False	NA	76	True	AATAAA	-28	NA	65511881	65700149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65512192_65549083_65549185_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.11	chr7	+	4146	21	NIC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	42.4009433857314	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAAGGGGCTTGTATTT	NA	False	NA	11	True	AATAAA	-16	NA	65511881	65700084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.13	chr7	+	4030	20	FSM	ENSMUSG00000030513.15	ENSMUST00000176209.2	3734	20	-293	-3	3	3	multi-exon	FALSE	canonical	3	5	junction_9	40.4291384456442	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	18	True	AATAAA	-23	NA	65511886	65700091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.16	chr7	+	3581	19	NNC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	-25820	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.693469017738	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGCTTGTATTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	65576939	65700088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602793_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.17	chr7	+	3425	16	NNC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	-95	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5546936578177	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGCTTGTATTTC	NA	False	NA	12	True	AATAAA	-17	NA	65602664	65700085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65602842_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.18	chr7	+	2829	12	ISM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	108511	52	17528	0	3prime_fragment	FALSE	canonical	3	144	junction_2	21.0206510031217	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAAAGGGGCTTGTAT	NA	False	NA	9	True	AATAAA	-14	NA	65620287	65700082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.19	chr7	+	2489	9	ISM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	121575	-6	30699	0	3prime_fragment	FALSE	canonical	3	46	junction_2	46.1789995560753	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGCTTGTATTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	65633458	65700088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.2	chr7	+	4706	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	-274	-27	21	27	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTATGGGTTCTTGAT	NA	False	NA	88	True	AATAAA	-40	NA	65511502	65700161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.20	chr7	+	4664	7	ISM	ENSMUSG00000030513.15	ENSMUST00000176209.2	3734	20	166826	-3	-9160	3	3prime_fragment	FALSE	canonical	3	169	junction_4	12.4018367815238	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTTGTATTTCTTTTCA	NA	False	NA	18	True	AATAAA	-23	NA	65679005	65700091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.21	chr7	+	6174	6	NIC	ENSMUSG00000108793.2	novel	304	3	NA	NA	-12145	-11931	intron_retention	FALSE	canonical	3	169	junction_3	13.0322676461159	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGCTTGTATTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	65681204	65700088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65681600_65683497_65683695_65684928_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.22	chr7	+	3384	5	Fusion	ENSMUSG00000030513.15_ENSMUSG00000108793.2	novel	304	3	NA	NA	-1076	0	multi-exon	TRUE	canonical	1	1	junction_1	76.6958277874357	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGCTTGTATTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	65687089	65700088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_65688424_65688460_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.23	chr7	+	1679	3	ISM	ENSMUSG00000030513.15	ENSMUST00000176209.2	3734	20	181082	0	5096	0	3prime_fragment	FALSE	canonical	3	180	junction_1	2	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGCTTGTATTTCTTT	NA	False	NA	15	True	AATAAA	-20	NA	65693261	65700088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65693393_65697304_65697418_65698653
ES.31048.3	chr7	+	4642	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	-377	-58	25	6	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGTGGGTGAAATGGAA	NA	False	NA	67	True	AATAAA	-19	NA	65511506	65700140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.4	chr7	+	3110	15	ISM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	-202	24063	93	-17205	5prime_fragment	FALSE	canonical	3	127	junction_4	21.270368389583	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGCTACTGACTCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	65511574	65676071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313
ES.31048.6	chr7	+	4401	22	NNC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.0053691714126	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATTGCAAAGGGGCTTG	NA	False	NA	6	True	AATAAA	-11	NA	65511754	65700079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620293_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688695_65688833_65693262_65693393_65697304_65697418_65698653
ES.31048.7	chr7	+	4239	21	NIC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.4033901946531	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGGGGCTTGTATTTCT	NA	False	NA	13	True	AATAAA	-18	NA	65511789	65700086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65512192_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ES.31049.1	chr7	-	2192	3	NNC	ENSMUSG00000093405.2	novel	380	2	NA	NA	-438	1776	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	15	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATGTGGGTGTCTAC	NA	False	NA	NA	False	NA	NA	NA	65512178	65508977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_65510336_65510737_65510986_65511592
ES.31049.2	chr7	-	2359	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	-239	-1740	-239	1740	multi-exon	FALSE	canonical	3	34	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATTTATATATCATATA	NA	False	NA	NA	False	TATAAA	-15	NA	65511979	65509013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_65510986_65511592
ES.31049.3	chr7	-	3149	1	Genic_Genomic	ENSMUSG00000093405.2	novel	NA	NA	NA	NA	-425	1737	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGATGATTTATATATCAT	NA	False	NA	NA	False	TATAAA	-12	NA	65512165	65509016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_65509000_65512200
ES.31049.4	chr7	-	1462	3	NNC	ENSMUSG00000093405.2	novel	380	2	NA	NA	33	1730	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCGGTGATGATTTAT	NA	False	NA	NA	False	TATAAA	-5	NA	65511707	65509023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_65510123_65510737_65510986_65511592
ES.3105.1	chr10	+	6379	9	NNC	ENSMUSG00000033427.15	novel	3042	10	NA	NA	6	-1486	intron_retention	FALSE	non_canonical	0	0	junction_1	1.05326872164704	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTTTGTGTAGTGT	1585	False	NA	NA	False	ATTAAA	-23	NA	75242750	75276027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75242994_75248600_75248773_75250823_75250912_75260326_75262096_75262478_75265966_75271979_75272062_75272709_75272753_75273890_75274046_75275687
ES.31050.1	chr7	-	173	1	Intergenic	novelGene_25530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATAATGTTGCGCT	2218	False	NA	NA	False	NA	NA	NA	65525568	65525395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65525400_65525600
ES.31051.1	chr7	-	3087	1	Intergenic	novelGene_25531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACAGCTGTGGGGGATG	NA	False	NA	NA	False	NA	NA	NA	65532532	65529445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65529400_65532500
ES.31052.1	chr7	-	4055	1	Intergenic	novelGene_25532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGTCCGATTCTTGTT	9579	False	NA	NA	False	NA	NA	NA	65626417	65622362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65622400_65626400
ES.31053.1	chr7	+	1302	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	-53	-1	-14	1	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTGTGTATCTGCAG	NA	False	NA	24	True	AATAAA	-24	NA	65710032	65724336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ES.31053.12	chr7	+	2111	6	FSM	ENSMUSG00000030512.14	ENSMUST00000139082.3	2026	6	-10	-75	-10	75	multi-exon	FALSE	canonical	3	2772	junction_5	101.577556576244	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAGGAAGGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	65710301	65721435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979
ES.31053.13	chr7	+	1134	8	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	217	2893	-9	82	5prime_fragment	FALSE	canonical	3	2395	junction_6	212.482412237352	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGAGGCAGGGAGGGTC	NA	False	NA	NA	False	NA	NA	NA	65710302	65721442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979
ES.31053.14	chr7	+	2623	5	ISM	ENSMUSG00000030512.14	ENSMUST00000139082.3	2026	6	12	-43	12	43	intron_retention	FALSE	canonical	3	2779	junction_2	92.0444865268963	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65710323	65721403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171
ES.31053.15	chr7	+	4986	6	FSM	ENSMUSG00000030512.14	ENSMUST00000139082.3	2026	6	12	-2972	12	-3	multi-exon	FALSE	canonical	3	2772	junction_5	101.577556576244	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710323	65724332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979
ES.31053.16	chr7	+	6114	1	NIC	ENSMUSG00000030512.14	novel	654	8	NA	NA	-3278	75	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAGGAAGGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	65715321	65721435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65715300_65721400
ES.31053.17	chr7	+	1057	4	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	9233	7	719	0	3prime_fragment	FALSE	canonical	3	2395	junction_1	390.577634906159	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGTGTGCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	65719318	65724328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65719947_65720337_65720414_65720979_65721074_65724069
ES.31053.3	chr7	+	2026	7	NIC	ENSMUSG00000030512.14	novel	955	8	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	2772	junction_5	192.939253537365	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710287	65724332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979_65721074_65724069
ES.31053.4	chr7	+	963	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	-4	-4	-4	-3	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTGTGCTGTGTATCT	NA	False	NA	20	True	AATAAA	-20	NA	65710287	65724332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
ES.31053.5	chr7	+	2897	4	ISM	ENSMUSG00000030512.14	ENSMUST00000139082.3	2026	6	-20	-75	0	75	intron_retention	FALSE	canonical	3	2779	junction_2	85.7217721598324	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAGGAAGGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	65710291	65721435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914
ES.31053.8	chr7	+	986	8	NNC	ENSMUSG00000030512.14	novel	955	8	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	1052.68329636647	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTGCTGTGTATCTG	NA	False	NA	21	True	AATAAA	-21	NA	65710294	65724333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720308_65720414_65720979_65721074_65724069
ES.31053.9	chr7	+	2326	5	NIC	ENSMUSG00000030512.14	novel	2026	6	NA	NA	5	75	intron_retention	FALSE	canonical	3	2772	junction_4	89.9583236838037	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAGGAAGGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	65710296	65721435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65720414_65720979
ES.31054.1	chr7	+	1201	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	-10	0	-10	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729386	65739153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ES.31054.3	chr7	+	1201	6	NNC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	205.927171592289	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729413	65739153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65729567_65730079_65730213_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ES.31054.5	chr7	+	1713	5	NIC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	410	junction_4	20.4511613362176	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729416	65739153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ES.31054.6	chr7	+	4609	5	NIC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	410	junction_4	18.3915741577495	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACAGTCTCTGGTTTTTC	NA	False	NA	5	True	AGTAAA	-14	NA	65729416	65739151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65729538_65730079_65730215_65733147_65736785_65736940_65737020_65738514
ES.31054.7	chr7	+	6101	4	NIC	ENSMUSG00000075701.11	novel	1157	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	435	junction_1	12.7279220613579	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACAGTCTCTGGTTTTTC	NA	False	NA	5	True	AGTAAA	-14	NA	65729419	65739151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65729538_65730079_65730215_65733147_65736785_65736940
ES.31054.8	chr7	+	1052	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	24	115	-4	103	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	65729420	65739038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ES.31055.1	chr7	+	3531	3	NNC	ENSMUSG00000032640.11	novel	4176	3	NA	NA	-109	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.5	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATTTTGTCTCATTAT	NA	False	NA	27	True	AATAAA	-34	NA	65759153	65823544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65759224_65774989_65775486_65820579
ES.31055.10	chr7	+	180	1	Intergenic	novelGene_25534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65798822	65799002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65798800_65799000
ES.31055.2	chr7	+	4274	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-99	1	-99	-1	multi-exon	FALSE	canonical	3	165	junction_1	21	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTTTGTCTCATTATT	NA	False	NA	28	True	AATAAA	-35	NA	65759163	65823545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65759976_65774989_65775486_65820579
ES.31055.3	chr7	+	5733	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-87	-1470	-87	1470	multi-exon	FALSE	canonical	3	165	junction_1	21	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTAGAATGGCCCATAT	NA	False	NA	NA	False	AATAAA	-10	NA	65759175	65825016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65759976_65774989_65775486_65820579
ES.31055.4	chr7	+	3950	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	-77	303	-77	-303	multi-exon	FALSE	canonical	3	165	junction_1	21	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCCTCATCCTTAAT	NA	False	NA	NA	False	AGTAAA	-30	NA	65759185	65823243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_65759976_65774989_65775486_65820579
ES.31055.5	chr7	+	3737	2	NIC	ENSMUSG00000032640.11	novel	4176	3	NA	NA	-67	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCAGACCCATTTTGT	NA	False	NA	19	True	AATAAA	-26	NA	65759195	65823536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_65759976_65820579
ES.31055.6	chr7	+	4110	4	NNC	ENSMUSG00000032640.11	novel	4176	3	NA	NA	-25	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.3420393767682	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCAGACCCATTTTGT	NA	False	NA	19	True	AATAAA	-26	NA	65759237	65823536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65759976_65774989_65775486_65820579_65821692_65821772
ES.31055.7	chr7	+	4127	4	NNC	ENSMUSG00000032640.11	novel	4176	3	NA	NA	-22	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.3420393767682	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCAGACCCATTTTGT	NA	False	NA	19	True	AATAAA	-26	NA	65759240	65823536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_65759976_65774989_65775486_65820579_65821438_65821498
ES.31055.8	chr7	+	2351	1	Genic_Genomic	ENSMUSG00000032640.11	novel	NA	NA	NA	NA	-22	-61955	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAGCAAACAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	65759240	65761591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_65759200_65761600
ES.31055.9	chr7	+	176	1	Intergenic	novelGene_25533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATTGAGGACCAG	NA	False	NA	NA	False	NA	NA	NA	65761253	65761429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_65761300_65761400
ES.31056.1	chr7	-	178	1	Intergenic	novelGene_25535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAAAAGCATAC	3657	False	NA	NA	False	NA	NA	NA	65890632	65890454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_65890500_65890600
ES.31057.1	chr7	-	7436	34	FSM	ENSMUSG00000015133.18	ENSMUST00000015277.14	7465	34	25	4	-18	3	multi-exon	TRUE	canonical	0	0	junction_2	1.04797675550246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATGGCCTTTGTCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	66038073	65908496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_65909842_65911485_65911588_65911793_65912645_65915172_65915290_65916238_65916357_65919485_65919638_65920474_65920670_65922564_65922843_65924523_65924722_65928270_65928438_65928941_65929192_65931375_65931516_65931921_65932086_65934982_65935155_65937187_65937465_65938831_65938992_65939360_65939482_65940475_65940649_65942004_65942170_65944541_65944757_65945160_65945274_65945868_65945999_65950609_65950687_65952402_65952516_65955140_65955279_65956592_65956757_65956852_65956981_65958408_65958636_65980416_65980566_65982026_65982207_65982862_65983035_65992509_65992674_66031199_66031415_66037967
ES.31057.2	chr7	-	7026	34	FSM	ENSMUSG00000015133.18	ENSMUST00000015277.14	7465	34	0	439	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.04797675550246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCACAAGCCCTGTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	66038098	65908931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_65909842_65911485_65911588_65911793_65912645_65915172_65915290_65916238_65916357_65919485_65919638_65920474_65920670_65922564_65922843_65924523_65924722_65928270_65928438_65928941_65929192_65931375_65931516_65931921_65932086_65934982_65935155_65937187_65937465_65938831_65938992_65939360_65939482_65940475_65940649_65942004_65942170_65944541_65944757_65945160_65945274_65945868_65945999_65950609_65950687_65952402_65952516_65955140_65955279_65956592_65956757_65956852_65956981_65958408_65958636_65980416_65980566_65982026_65982207_65982862_65983035_65992509_65992674_66031199_66031415_66037967
ES.31058.1	chr7	-	3461	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	-20	2	-20	-2	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATTGTTTTTCATTGG	NA	False	NA	-2	True	AATAAA	-17	NA	66077285	66040639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ES.31058.2	chr7	-	9324	12	NIC	ENSMUSG00000015134.16	novel	3443	13	NA	NA	40	-5	intron_retention	FALSE	canonical	3	11	junction_3	3.94172425248705	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGATTGTTTTTCAT	NA	False	NA	-5	True	AATAAA	-14	NA	66077225	66040642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ES.31058.3	chr7	-	2783	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	42	618	42	-618	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTTTGGGTTGACTGCT	NA	False	NA	NA	False	CATAAA	-19	NA	66077223	66041255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ES.31058.4	chr7	-	1507	7	ISM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	23	17631	23	-10	5prime_fragment	FALSE	canonical	3	14	junction_3	2.80871659105879	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAGACTCTG	NA	False	NA	NA	False	NA	NA	NA	66077242	66058268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ES.31058.5	chr7	-	892	3	NNC	ENSMUSG00000015134.16	novel	3443	13	NA	NA	42	-9656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	11.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAGTGAACTGTTATAA	NA	False	NA	NA	False	AATAAA	-14	NA	66077223	66068360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66068992_66071958_66072058_66077061
ES.31059.1	chr7	-	6350	1	Intergenic	novelGene_25536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGTGGGAACAA	NA	False	NA	NA	False	NA	NA	NA	66150206	66143856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_66143900_66150200
ES.3106.1	chr10	+	181	1	Intergenic	novelGene_2440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTTGCCTGGGAA	NA	False	NA	NA	False	NA	NA	NA	75299801	75299982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75299800_75300000
ES.31060.1	chr7	+	2871	1	Intergenic	novelGene_25537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCAGCATGCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	66151845	66154716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_66151800_66154700
ES.31061.1	chr7	-	1429	1	Intergenic	novelGene_25538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCCCACAGAA	NA	False	NA	NA	False	NA	NA	NA	66181312	66179883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_66179900_66181300
ES.31062.1	chr7	-	5536	1	FSM	ENSMUSG00000109249.2	ENSMUST00000209012.2	3827	1	134	-1843	134	1843	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGGAAAAGGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66268762	66263226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66263200_66268800
ES.31063.1	chr7	+	6253	1	Antisense	novelGene_ENSMUSG00000030509.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAACACCAGATGGACAAT	NA	False	NA	NA	False	NA	NA	NA	66299687	66305940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_66299700_66305900
ES.31064.1	chr7	+	4946	4	Antisense	novelGene_ENSMUSG00000030509.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAAGCCACAGATGG	NA	False	NA	NA	False	AAGAAA	-36	NA	66308032	66334076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_66310004_66327904_66327993_66328826_66329089_66331451
ES.31065.1	chr7	-	5122	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	24	129	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATGCACATTTCAA	NA	False	NA	NA	False	NA	NA	NA	66339320	66294183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.10	chr7	-	5152	8	NNC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_4	27.7694590718447	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACTGAATTTGT	NA	False	NA	-10	True	ATTAAA	-24	NA	66339344	66294320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66330483_66330627_66331452_66331557_66338570_66338669_66338847
ES.31065.11	chr7	-	4727	6	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	4	-10	intron_retention	FALSE	canonical	0	0	junction_2	29.8127489507425	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATACTGAATTT	NA	False	NA	-12	True	ATTAAA	-22	NA	66339340	66294322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.13	chr7	-	4377	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	1	550	1	-550	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCAAACCTCATCTTTT	NA	False	NA	NA	False	CATAAA	-16	NA	66339343	66294862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.14	chr7	-	3834	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	76	1018	-5	-1018	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGCTGTTTACTGC	NA	False	NA	NA	False	AATAAA	-20	NA	66339268	66295330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.15	chr7	-	3292	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	0	1300	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATAAGGGCTTCTCCTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66339344	66296037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.16	chr7	-	2823	7	NIC	ENSMUSG00000030509.18	novel	4484	6	NA	NA	0	1289	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	26.7420808631058	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTGCAGGATAAGGG	NA	False	NA	NA	False	AATAAA	-10	NA	66338632	66296048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66337631_66337707_66338570
ES.31065.17	chr7	-	2960	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-4	1045	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAATTTTCTGGGTTG	NA	False	NA	NA	False	AGTAAA	-16	NA	66339267	66296292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.18	chr7	-	2550	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	-37	2415	-37	610	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCCTCTTGTGCAACTC	NA	False	NA	NA	False	TTTAAA	-45	NA	66339381	66296727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.19	chr7	-	2227	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	78	2623	-3	402	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGACCTCGGCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	66339266	66296935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.2	chr7	-	5042	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-23	2	intron_retention	FALSE	canonical	3	29	junction_2	17.1407571465077	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTGTGTTTTCTTTC	NA	False	NA	0	True	ATTAAA	-34	NA	66339367	66294310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.20	chr7	-	2815	8	NNC	ENSMUSG00000030509.18	novel	2137	6	NA	NA	-4	696	intron_retention	FALSE	canonical	0	0	junction_1	26.4721648189959	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGAGTTCGTCTTTCT	NA	False	NA	NA	False	TATAAA	-15	NA	66339267	66326074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66327699_66327904_66327994_66328827_66329090_66330483_66330627_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.21	chr7	-	2165	5	NIC	ENSMUSG00000030509.18	novel	2137	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	50	junction_1	11.9687092035858	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTTCATCTTAGTGT	NA	False	NA	NA	False	AATAAA	-26	NA	66339325	66326770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.22	chr7	-	2215	6	FSM	ENSMUSG00000030509.18	ENSMUST00000068980.4	2137	6	-87	9	-14	-9	multi-exon	FALSE	canonical	3	10	junction_3	30.261526729496	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTCAACTTTGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	66339309	66326779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66327994_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.3	chr7	-	5100	8	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-6	2	intron_retention	FALSE	canonical	3	10	junction_5	27.0539898600362	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTGTGTTTTCTTTC	NA	False	NA	0	True	ATTAAA	-34	NA	66339350	66294310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.4	chr7	-	4948	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	-20	0	-20	0	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339364	66294312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.5	chr7	-	4333	6	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_1	28.6733325583198	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339266	66294312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66327904_66327994_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ES.31065.6	chr7	-	4360	5	NNC	ENSMUSG00000030509.18	novel	4484	6	NA	NA	9737	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	19.9374020373769	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	8740	False	NA	-2	True	ATTAAA	-32	NA	66328895	66294312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66297674_66304536_66304773_66309397_66310004_66327904_66327994_66328827
ES.31065.7	chr7	-	4968	7	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	10	junction_4	29.7587522139846	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339309	66294312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.8	chr7	-	5015	8	NNC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	9	0	intron_retention	TRUE	canonical	0	0	junction_3	27.1330809461928	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339213	66294312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66297674_66309397_66310004_66328827_66329090_66330483_66330627_66331452_66331557_66337631_66337707_66338570_66338669_66338847
ES.31065.9	chr7	-	5020	7	NNC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	24.8774775427271	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAATTTGTGTTTTC	NA	False	NA	-4	True	ATTAAA	-30	NA	66339343	66294314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329096_66331452_66331557_66338570_66338669_66338847
ES.31066.1	chr7	+	3520	13	Fusion	ENSMUSG00000030510.12_ENSMUSG00000053091.17	novel	1159	10	NA	NA	-29	-1	multi-exon	FALSE	canonical	0	0	junction_2	23.3861010478922	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTATGGTGACTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	66339607	66473438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_66339772_66345923_66346055_66383185_66383410_66413922_66414097_66423337_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533_66445688_66471437
ES.31066.10	chr7	+	5883	7	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	44	junction_3	15.1767365837763	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCAAGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	66339701	66367001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
ES.31066.11	chr7	+	3942	6	NIC	ENSMUSG00000053091.17	novel	2729	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_3	15.357083056362	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339701	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66360495_66361620_66361793_66363548
ES.31066.12	chr7	+	2561	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.3808425213598	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339701	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.13	chr7	+	5030	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	16.3647656737136	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGTGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	66339701	66367002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.14	chr7	+	5093	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	-4	-1	-4	1	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAGTGTCCTTGTGATA	NA	False	NA	NA	False	NA	NA	NA	66339701	66367005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.15	chr7	+	3374	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	44	junction_3	15.1767365837763	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339701	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
ES.31066.16	chr7	+	3204	12	Fusion	ENSMUSG00000030510.12_ENSMUSG00000053091.17	novel	1159	10	NA	NA	-4	1	multi-exon	FALSE	canonical	0	0	junction_2	24.2759616503567	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTATGGTGACTGAGTC	NA	False	NA	NA	False	AATAAA	-17	NA	66339701	66473440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_66339772_66345923_66346055_66413922_66414097_66423337_66423453_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533_66445688_66471437
ES.31066.17	chr7	+	2719	8	NNC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.0134657612206	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339701	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.18	chr7	+	4561	5	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-3	-23	intron_retention	FALSE	canonical	3	45	junction_3	16.3611582719562	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGCAAGAAC	NA	False	NA	-12	True	NA	NA	NA	66339702	66364469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358477_66359041_66361793_66363548
ES.31066.19	chr7	+	5155	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	-2508	0	-2	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGCAAGTGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	66339705	66367000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.2	chr7	+	2798	8	NNC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.4905999535686	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339608	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361631_66361793_66363548
ES.31066.20	chr7	+	2592	8	NIC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	1	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.7137930975907	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGCAAGAAC	NA	False	NA	-12	True	NA	NA	NA	66339706	66364469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66356772_66356873_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.21	chr7	+	2839	7	NNC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	6	-23	intron_retention	FALSE	canonical	0	0	junction_2	26.4952825989835	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGCAAGAAC	NA	False	NA	-12	True	NA	NA	NA	66339711	66364469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.22	chr7	+	5365	9	NNC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3072792493137	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGTGTCCTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	66339711	66367004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346055_66352252_66352455_66357706_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.23	chr7	+	2733	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	6	4	intron_retention	FALSE	canonical	3	24	junction_4	19.4736288919714	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCTGGGTCTTTGCCTT	NA	False	NA	18	True	AATAAA	-24	NA	66339711	66364499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.24	chr7	+	6437	6	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	44	junction_3	15.357083056362	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCAAGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	66339712	66367001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66360495_66361620_66361793_66363548
ES.31066.25	chr7	+	3440	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	7	1641	-6	868	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTGTGTTCATGCTG	NA	False	NA	NA	False	NA	NA	NA	66339712	66365363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.26	chr7	+	4013	5	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	50	junction_4	14.4460202131937	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339712	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66360495_66361620_66361793_66363548
ES.31066.27	chr7	+	3199	7	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-6	810	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.9583033572986	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACGTTGTAAAAGACAAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	66339712	66365305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358209_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.28	chr7	+	3863	6	NNC	ENSMUSG00000053091.17	novel	2729	8	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_4	29.0929544735491	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339712	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66360495_66361688_66361793_66363548
ES.31066.29	chr7	+	6008	7	NNC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_2	25.117501645046	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCAAGTGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	66339712	66367001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
ES.31066.3	chr7	+	2870	8	NNC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.5323609686039	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339618	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.30	chr7	+	3502	7	NNC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	25.117501645046	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339712	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358302_66358386_66358477_66359041_66360495_66361620_66361793_66363548
ES.31066.31	chr7	+	4987	7	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.9583033572986	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGTGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	66339714	66367002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.32	chr7	+	5228	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	24	junction_4	19.4736288919714	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGAGCAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	66339716	66366999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.33	chr7	+	2786	7	NNC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	27.0102861065105	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339719	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66339772_66345923_66346077_66357673_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.34	chr7	+	5024	6	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	1	-2	intron_retention	FALSE	canonical	2	7	junction_1	18.2098874241441	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGCAAGTGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	66339719	66367000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66357787_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.35	chr7	+	2624	8	FSM	ENSMUSG00000053091.17	ENSMUST00000121777.9	2729	8	79	26	2	-23	multi-exon	FALSE	canonical	1	1	junction_4	26.0462696612261	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAGCAAGAAC	NA	False	NA	-12	True	NA	NA	NA	66339720	66364469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358492_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.36	chr7	+	5122	4	NIC	ENSMUSG00000053091.17	novel	2729	8	NA	NA	14	0	intron_retention	FALSE	canonical	3	50	junction_3	14.7271480229163	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCGTGTCTGGGTCTTTG	NA	False	NA	14	True	AATAAA	-20	NA	66339732	66364495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66361793_66363548
ES.31066.37	chr7	+	5186	8	NNC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	6202	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.1351337244651	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAGATGAGCAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	66345920	66366996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66346055_66356772_66356873_66357787_66358302_66358386_66358475_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31066.38	chr7	+	2469	7	ISM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	6259	2512	6246	0	3prime_fragment	FALSE	canonical	3	20	junction_4	14.8099065943487	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66345964	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.39	chr7	+	2291	1	FSM	ENSMUSG00000109133.2	ENSMUST00000207179.2	657	1	-1082	-552	-1082	552	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATGGCTGTTATAAA	NA	False	NA	NA	False	NA	NA	NA	66371784	66374075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66371800_66374100
ES.31066.4	chr7	+	4946	6	NIC	ENSMUSG00000053091.17	novel	5088	8	NA	NA	-18	921	intron_retention	FALSE	canonical	3	44	junction_3	15.357083056362	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATACTGGGCTTCCATT	NA	False	NA	NA	False	NA	NA	NA	66339618	66365416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66360495_66361620_66361793_66363548
ES.31066.5	chr7	+	2121	7	NIC	ENSMUSG00000053091.17	novel	2647	8	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	26.0112155297159	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCAAACATGCGTGTC	NA	False	NA	4	True	AATAAA	-10	NA	66339636	66364485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66361620_66361793_66363548
ES.31066.6	chr7	+	1430	3	ISM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	-28	667	21	-667	intron_retention	FALSE	canonical	3	70	junction_2	8	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGTTTTTTATTACA	NA	False	NA	NA	False	AGTAAA	-18	NA	66339668	66358983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66339772_66345923_66346055_66357787
ES.31066.7	chr7	+	2710	9	NIC	ENSMUSG00000053091.17	novel	2719	10	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	25.3562122565655	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339671	66364492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66356772_66356873_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ES.31066.8	chr7	+	1181	3	NIC	ENSMUSG00000053091.17	novel	1419	5	NA	NA	4	-668	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	18.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGATAGTTTTTTATTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	66339700	66358982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66357787_66358302_66358386
ES.31066.9	chr7	+	4983	7	NIC	ENSMUSG00000053091.17	novel	2729	8	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.3808425213598	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGTCCTTGTGATAT	NA	False	NA	NA	False	NA	NA	NA	66339700	66367006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66339772_66345923_66346055_66357787_66358209_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ES.31067.1	chr7	-	8593	1	Antisense	novelGene_ENSMUSG00000053091.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTTGTATAGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	66353476	66344883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_66344900_66353500
ES.31067.2	chr7	-	8505	2	Antisense	novelGene_ENSMUSG00000053091.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66353476	66344912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_66348948_66349006
ES.31068.1	chr7	-	214	1	Intergenic	novelGene_25539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGATAAATGGCAGG	NA	False	NA	NA	False	NA	NA	NA	66852479	66852265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_66852300_66852500
ES.31069.1	chr7	+	2927	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	-22	-7	7	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872333	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66872378_66873356_66873640_66875611
ES.31069.10	chr7	+	919	3	ISM	ENSMUSG00000043831.13	ENSMUST00000179106.3	3319	4	-7	3869	6	-32	5prime_fragment	FALSE	canonical	3	17	junction_2	6	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACAAACAACTT	NA	False	NA	NA	False	NA	NA	NA	66872369	66874342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66872787_66873356_66873640_66874123
ES.31069.11	chr7	+	3326	4	FSM	ENSMUSG00000043831.13	ENSMUST00000179106.3	3319	4	-7	0	6	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8977121983832	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872369	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66872787_66873356_66873640_66874123_66874150_66875611
ES.31069.12	chr7	+	3541	3	NNC	ENSMUSG00000043831.13	novel	3319	4	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	42	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872369	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66873028_66873356_66873640_66875611
ES.31069.13	chr7	+	2974	4	NNC	ENSMUSG00000043831.13	novel	3319	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.8361242901037	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872369	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66872398_66872723_66872787_66873356_66873640_66875611
ES.31069.14	chr7	+	3140	2	ISM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	737	0	-264	0	3prime_fragment	FALSE	canonical	3	84	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	66873092	66878204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66873640_66875611
ES.31069.15	chr7	+	4372	2	ISM	ENSMUSG00000043831.13	ENSMUST00000179106.3	3319	4	978	1	-2	-1	intron_retention	FALSE	canonical	3	17	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGATTCTCCCTCTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	66873354	66878210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66873640_66874123
ES.31069.16	chr7	+	1696	2	ISM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	992	-8	-1	8	3prime_fragment	FALSE	canonical	3	84	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACAATGTCAGTCAGCC	NA	False	NA	NA	False	AGTAAA	-32	NA	66873355	66877023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66873640_66875611
ES.31069.17	chr7	+	4368	1	Genic_Genomic	ENSMUSG00000043831.13	novel	NA	NA	NA	NA	3964	-3344	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAACTTTCCTGTGATG	NA	False	NA	NA	False	AATAAA	-17	NA	66877320	66881688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_66877300_66881700
ES.31069.2	chr7	+	3000	3	NIC	ENSMUSG00000043831.13	novel	641	2	NA	NA	4	2329	intron_retention	FALSE	canonical	0	0	junction_2	22.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTATGTCTCTGGGTAT	NA	False	NA	NA	False	AAAACA	-19	NA	66872347	66887361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66872378_66873356_66873640_66884674
ES.31069.3	chr7	+	2930	3	NNC	ENSMUSG00000043831.13	novel	3319	4	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGATTCTCCCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	66872347	66878208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66872398_66873356_66873640_66875611
ES.31069.4	chr7	+	3745	3	ISM	ENSMUSG00000043831.13	ENSMUST00000208213.2	3060	4	27	-8	-2	0	intron_retention	FALSE	canonical	1	1	junction_2	22	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872353	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_66872378_66873356_66873640_66874773
ES.31069.5	chr7	+	2928	4	NIC	ENSMUSG00000043831.13	novel	3772	4	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.5532267334343	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGATTCTCCCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	66872355	66878208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66872378_66873356_66873640_66874123_66874150_66875611
ES.31069.6	chr7	+	2470	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	1	427	1	-426	multi-exon	FALSE	canonical	3	45	junction_1	19.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGACCGTTGTGGCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	66872356	66877777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66872378_66873356_66873640_66875611
ES.31069.7	chr7	+	2961	4	NIC	ENSMUSG00000043831.13	novel	631	4	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.8361242901037	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGATTCTCCCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	66872359	66878208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_66872378_66872723_66872787_66873356_66873640_66875611
ES.31069.8	chr7	+	3305	3	NNC	ENSMUSG00000043831.13	novel	3319	4	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_1	42	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAAACATGATTCTCC	NA	False	NA	NA	False	AATAAA	-14	NA	66872368	66878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_66872787_66873343_66873640_66875611
ES.31069.9	chr7	+	3301	3	FSM	ENSMUSG00000043831.13	ENSMUST00000208998.2	2110	3	5	-1196	5	0	multi-exon	FALSE	canonical	3	29	junction_1	27.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTCTCCCTCTTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	66872368	66878211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_66872787_66873356_66873640_66875611
ES.3107.1	chr10	-	3091	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	-122	531	-122	11	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTTTGTCTTGTCGTC	NA	False	NA	-2	True	AATAAA	-22	NA	75353337	75342647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ES.3107.10	chr10	-	3088	6	NNC	ENSMUSG00000033416.16	novel	3500	6	NA	NA	-25	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	34.960549194771	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGGTAGCACCCTTTG	NA	False	NA	-12	True	AATAAA	-12	NA	75353157	75342657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347722_75347991_75352983
ES.3107.11	chr10	-	3037	6	NIC	ENSMUSG00000033416.16	novel	2843	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	33.1083071146804	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGGTAGCACCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	75353712	75342658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347736_75347991_75353574
ES.3107.2	chr10	-	2882	6	NIC	ENSMUSG00000033416.16	novel	2843	6	NA	NA	4	10	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	28.7026131214564	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCCTTTGTCTTGTCGT	NA	False	NA	-3	True	AATAAA	-21	NA	75353716	75342648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353574
ES.3107.3	chr10	-	3090	7	NNC	ENSMUSG00000033416.16	novel	3500	6	NA	NA	-26	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	35.2167889254858	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACCCTTTGTCTTGTCG	NA	False	NA	-4	True	AATAAA	-20	NA	75353158	75342649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347271_75347452_75347905_75347991_75352987
ES.3107.5	chr10	-	3181	6	NNC	ENSMUSG00000033416.16	novel	3500	6	NA	NA	-30	2	intron_retention	TRUE	canonical	1	1	junction_2	40.8578021924822	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTAGCACCCTTTGT	NA	False	NA	-11	True	AATAAA	-13	NA	75353162	75342656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75344804_75345425_75345958_75346745_75346822_75346954_75347121_75347905_75347991_75352987
ES.3107.6	chr10	-	3619	5	ISM	ENSMUSG00000033416.16	ENSMUST00000145890.8	2816	9	-145	155712	-37	2	5prime_fragment	FALSE	canonical	3	66	junction_2	10.4880884817015	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTAGCACCCTTTGT	NA	False	NA	-11	True	AATAAA	-13	NA	75353252	75342656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ES.3107.7	chr10	-	3726	4	NIC	ENSMUSG00000033416.16	novel	3500	6	NA	NA	-29	2	intron_retention	FALSE	canonical	3	66	junction_1	10.8730042868667	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTAGCACCCTTTGT	NA	False	NA	-11	True	AATAAA	-13	NA	75353161	75342656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75345958_75346954_75347121_75347905_75347991_75352987
ES.3107.9	chr10	-	4442	3	NIC	ENSMUSG00000033416.16	novel	626	5	NA	NA	-967	1	intron_retention	FALSE	canonical	3	70	junction_1	11	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGGTAGCACCCTTTG	NA	False	NA	-12	True	AATAAA	-12	NA	75348082	75342657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75345668_75345865_75347121_75347905
ES.31070.1	chr7	+	3334	1	Intergenic	novelGene_25540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67009865	67013199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_67009900_67013200
ES.31071.1	chr7	-	5568	12	NNC	ENSMUSG00000030557.18	novel	2476	11	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	20.5265399659857	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGACTCTGTCATGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	67022580	66880912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901396_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66980652_66980721_66999616_66999670_67022460
ES.31071.10	chr7	-	5290	11	NIC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	1	-89	intron_retention	FALSE	canonical	0	0	junction_1	19.9451748550871	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATGGTTAAGACAATGC	NA	False	NA	NA	False	AATAAA	-20	NA	67022574	66880999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.11	chr7	-	5280	10	NNC	ENSMUSG00000030557.18	novel	2476	11	NA	NA	4	-90	intron_retention	FALSE	canonical	0	0	junction_1	18.9156672929031	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAATGGTTAAGACAATG	NA	False	NA	NA	False	AATAAA	-19	NA	67022571	66881000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917802_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.12	chr7	-	5420	12	NIC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	2	-91	intron_retention	FALSE	canonical	1	1	junction_4	18.0050497967048	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAATGGTTAAGACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	67022573	66881001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.13	chr7	-	5399	11	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	-3	-138	intron_retention	FALSE	canonical	3	7	junction_9	12.5713961038542	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTTTTCTTCATT	NA	False	NA	NA	False	AAGAAA	-29	NA	67022609	66881048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.14	chr7	-	5370	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	29	-2735	-2	-141	multi-exon	FALSE	canonical	3	7	junction_9	15.401623291069	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTTGTTTTTTCTTC	NA	False	NA	NA	False	AAGAAA	-26	NA	67022577	66881051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.15	chr7	-	5390	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	-17	-614	-17	-141	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTTGTTTTTTCTTC	NA	False	NA	NA	False	AAGAAA	-26	NA	67022623	66881051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.16	chr7	-	5340	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	30	-2894	-1	-150	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCCTGAATGTGTTGT	NA	False	NA	NA	False	AAGAAA	-17	NA	67022576	66881060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.17	chr7	-	5386	12	NIC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	-10	-151	intron_retention	FALSE	canonical	1	1	junction_4	19.3194117255544	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCCCTGAATGTGTTG	NA	False	NA	NA	False	AAGAAA	-16	NA	67022585	66881061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.18	chr7	-	3585	10	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	-5	-791	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	15.2906006793652	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTGAGCAGCTACCTG	NA	False	NA	NA	False	ATTAAA	-33	NA	67022580	66882622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66999616_66999670_67022460
ES.31071.19	chr7	-	3275	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	20	-819	-11	445	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCGTTATTTAAAAC	NA	False	NA	NA	False	TATAAA	-19	NA	67022586	66883135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.2	chr7	-	5499	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	13	-753	13	-2	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGACTCTGTCATGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	67022593	66880912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.20	chr7	-	5378	12	NNC	ENSMUSG00000030557.18	novel	2664	11	NA	NA	2	444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.959048984449	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGGCGTTATTTAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	67022573	66883136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66886271_66886399_66890061_66890189_66892195_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.21	chr7	-	3372	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	-60	-648	-60	442	multi-exon	FALSE	canonical	3	7	junction_9	15.401623291069	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAAGGCGTTATTTAA	NA	False	NA	NA	False	TATAAA	-16	NA	67022666	66883138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.22	chr7	-	3275	11	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	-1	441	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	12.5713961038542	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATAAGGCGTTATTTA	NA	False	NA	NA	False	TATAAA	-15	NA	67022576	66883139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.23	chr7	-	3277	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	8	1474	8	441	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATAAGGCGTTATTTA	NA	False	NA	NA	False	TATAAA	-15	NA	67022598	66883139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.24	chr7	-	3242	11	NNC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	2	439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.3029554498846	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATAAGGCGTTATT	NA	False	NA	NA	False	TATAAA	-13	NA	67022573	66883141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884969_66886271_66886383_66890065_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.25	chr7	-	3320	12	NNC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	0	439	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	17.8237468118581	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTATAAGGCGTTATT	NA	False	NA	NA	False	TATAAA	-13	NA	67022575	66883141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66980652_66980721_66999616_66999670_67022460
ES.31071.26	chr7	-	5148	9	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	1	418	intron_retention	FALSE	canonical	0	0	junction_3	15.6764154065909	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAATGTGTTGTAA	NA	False	NA	NA	False	CATAAA	-42	NA	67022574	66883162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66914612_66914673_66915690_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.27	chr7	-	2970	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	33	1756	2	159	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGGGGGGAAAGGCGA	NA	False	NA	NA	False	ATTAAA	-25	NA	67022573	66883421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.28	chr7	-	2947	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	50	-521	19	147	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATTGCCGCCAATTTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	67022556	66883433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.29	chr7	-	815	5	NNC	ENSMUSG00000030557.18	novel	4445	2	NA	NA	-2	6873	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.6159663212173	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAATGTTTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	67022577	66932265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66932496_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.3	chr7	-	5575	13	NNC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1	junction_4	21.2660070430618	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGACTCTGTCATGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	67022577	66880912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66980652_66980721_66999616_66999670_67022460
ES.31071.4	chr7	-	5485	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	32	-3041	1	-3	multi-exon	FALSE	canonical	3	15	junction_6	11.6120626935958	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAGACTCTGTCATGT	NA	False	NA	NA	False	AGTAAA	-21	NA	67022574	66880913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ES.31071.5	chr7	-	5504	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	33	-2873	2	-3	multi-exon	FALSE	canonical	3	7	junction_9	15.401623291069	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAGACTCTGTCATGT	NA	False	NA	NA	False	AGTAAA	-21	NA	67022573	66880913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.6	chr7	-	5501	11	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	7	junction_9	12.5713961038542	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAGACTCTGTCATGT	NA	False	NA	NA	False	AGTAAA	-21	NA	67022576	66880913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.7	chr7	-	5548	12	NIC	ENSMUSG00000030557.18	novel	2664	11	NA	NA	12	-4	intron_retention	FALSE	canonical	1	1	junction_4	19.4388211729786	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCCAGACTCTGTCATG	NA	False	NA	NA	False	AGTAAA	-20	NA	67022594	66880914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ES.31071.8	chr7	-	5516	12	NNC	ENSMUSG00000030557.18	novel	5538	12	NA	NA	-6	-72	intron_retention	FALSE	canonical	1	1	junction_9	17.8237468118581	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGGTTGTTGTAAGC	NA	False	NA	NA	False	AATAAA	-37	NA	67022612	66880982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66980652_66980721_66999616_66999670_67022460
ES.31071.9	chr7	-	6205	2	ISM	ENSMUSG00000030557.18	ENSMUST00000207794.2	2766	7	29964	-2582	27412	-88	3prime_fragment	FALSE	canonical	3	52	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGGTTAAGACAATGCT	NA	False	NA	NA	False	AATAAA	-21	NA	66888498	66880998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_66884977_66886271
ES.31072.1	chr7	+	2091	1	Intergenic	novelGene_25541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCATGCCTGAATT	NA	False	NA	NA	False	NA	NA	NA	67264611	67266702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_67264600_67266700
ES.31073.1	chr7	-	2938	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	-16	1	-16	-1	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTCTTCTCTCCTCCTG	556	False	NA	-3	True	AATAAA	-15	NA	67294995	67163158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.10	chr7	-	1296	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-15	-470	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	26.9162474167556	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGTGTTGTCTTCTGT	557	False	NA	NA	False	AATACA	-15	NA	67294994	67164623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.11	chr7	-	1360	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	-470	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGTGTTGTCTTCTGT	574	False	NA	NA	False	AATACA	-15	NA	67294977	67164623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.12	chr7	-	1268	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	17	-472	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGACGTGTTGTCTTCT	552	False	NA	NA	False	AATACA	-13	NA	67294999	67164625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.13	chr7	-	1408	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	2	-476	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	26.9092804623238	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAAGGACGTGTTGTC	574	False	NA	NA	False	AATACA	-9	NA	67294977	67164629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67290851_67291089_67294925
ES.31073.14	chr7	-	3653	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-1	2617	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	14.2741024236202	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATGTATATGTGTATA	595	False	NA	NA	False	AATAAA	-27	NA	67294956	67176716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.15	chr7	-	1862	6	FSM	ENSMUSG00000030556.14	ENSMUST00000032775.12	1817	6	-29	-16	-5	16	multi-exon	FALSE	canonical	2	6	junction_1	30.7662152368471	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAATGGCTCCGTGTCTTT	567	False	NA	NA	False	AATAAA	-32	NA	67294984	67244130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67245480_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.2	chr7	-	2843	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTCTTCTCTCCTCCTG	556	False	NA	-3	True	AATAAA	-15	NA	67294995	67163158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.3	chr7	-	2720	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	20.648471493067	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTCTTCTCTCCTCCTG	567	False	NA	-3	True	AATAAA	-15	NA	67294984	67163158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.5	chr7	-	2701	8	NIC	ENSMUSG00000030556.14	novel	2761	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	30.382594372705	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCTTCTCTCCTCCT	NA	False	NA	-4	True	AATAAA	-14	NA	67269776	67163159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67269664
ES.31073.7	chr7	-	1936	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	-5	992	-5	4	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAGAAGTTTTGAAT	567	False	NA	NA	False	ATTAAA	-24	NA	67294984	67164149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.8	chr7	-	1510	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	-21	1434	16	-438	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAGTGTGTCTCATATA	551	False	NA	NA	False	AATGAA	-31	NA	67295000	67164591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31073.9	chr7	-	1202	9	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	-16	-470	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	25.6124969497314	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGTGTTGTCTTCTGT	556	False	NA	NA	False	AATACA	-15	NA	67294995	67164623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67164927_67179333_67179494_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ES.31074.1	chr7	+	5920	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	-1987	-1717	-1972	1582	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCTCTGGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	67295185	67378041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ES.31074.10	chr7	+	2053	11	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.0567796012813	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCAGTTTGTGTGTTTG	NA	False	NA	10	True	AATAAA	-15	NA	67297181	67376321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ES.31074.11	chr7	+	3947	10	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	9	-12188	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	29.208065857073	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGTGAAGTTTTTTACATT	NA	False	NA	NA	False	TATAAA	-15	NA	67297181	67363574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101
ES.31074.12	chr7	+	6280	7	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	10	4790	intron_retention	FALSE	canonical	2	7	junction_2	35.3478743663918	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGATTTTTCT	NA	False	NA	NA	False	GATAAA	-15	NA	67297182	67333860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.13	chr7	+	2115	11	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	33.2957955303669	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTTTGTGTGTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	67297196	67376322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ES.31074.14	chr7	+	4154	7	ISM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	152	25247	117	3074	5prime_fragment	FALSE	canonical	3	46	junction_1	14.7948940141148	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAAGTTCCCGTGTGAGGT	NA	False	NA	NA	False	AATAGA	-13	NA	67297324	67351077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971
ES.31074.15	chr7	+	1226	6	ISM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	316	47163	281	91	5prime_fragment	FALSE	canonical	3	46	junction_1	15.9072310601185	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTGTACTTACATC	NA	False	NA	NA	False	TTTAAA	-15	NA	67297488	67329161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.16	chr7	+	5307	5	NNC	ENSMUSG00000030555.17	novel	2684	7	NA	NA	-4182	4424	intron_retention	FALSE	canonical	1	3	junction_1	36.0303691349395	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGTCTATCTGCATA	NA	False	NA	NA	False	NA	NA	NA	67312353	67333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67312407_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.17	chr7	+	3662	1	NIC	ENSMUSG00000030555.17	novel	3627	4	NA	NA	-1086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGCTGTGTGTTACATAA	NA	False	NA	NA	False	NA	NA	NA	67318650	67322312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67318600_67322300
ES.31074.18	chr7	+	4150	1	Antisense	novelGene_ENSMUSG00000109115.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGGAAAATTTCACATT	NA	False	NA	NA	False	AATAAA	-10	NA	67330531	67334681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_67330500_67334700
ES.31074.2	chr7	+	3849	4	NNC	ENSMUSG00000030555.17	novel	3627	4	NA	NA	-1953	-3348	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2.49443825784929	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGCCGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	67295204	67316357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67297594_67301670_67301720_67312074_67312275_67315146
ES.31074.3	chr7	+	2384	13	NNC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.3045283529213	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297166	67376324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67297594_67301670_67301720_67310639_67310749_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359204_67361101_67361252_67374981_67375065_67375775
ES.31074.4	chr7	+	10132	6	ISM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	0	38573	0	8681	5prime_fragment	FALSE	canonical	3	46	junction_1	15.9072310601185	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCTGAGCTTCTTGGTG	NA	False	NA	NA	False	NA	NA	NA	67297172	67337751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.5	chr7	+	5672	5	ISM	ENSMUSG00000030555.17	ENSMUST00000126093.8	1991	10	-24	42832	1	4422	5prime_fragment	TRUE	canonical	1	3	junction_1	36.0303691349395	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTCAGTCTATCTGCA	NA	False	NA	NA	False	NA	NA	NA	67297173	67333492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67297594_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.6	chr7	+	7361	7	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	4	5865	intron_retention	FALSE	canonical	2	7	junction_2	35.3478743663918	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACGTGACAGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	67297176	67334935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641
ES.31074.7	chr7	+	2208	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	8	0	8	0	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297180	67376324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ES.31074.8	chr7	+	3452	6	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	36.2414127759943	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTGTGTTACATAACC	NA	False	NA	NA	False	NA	NA	NA	67297180	67322314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799
ES.31074.9	chr7	+	2410	10	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	46	junction_1	11.4212277993412	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297181	67376324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ES.31075.1	chr7	-	6990	5	FSM	ENSMUSG00000030554.17	ENSMUST00000051389.10	6953	5	-34	-3	-34	3	multi-exon	FALSE	canonical	1	1	junction_1	2.69258240356725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTCACTTGTGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	67409524	67379912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67383302_67384207_67386655_67388852_67388924_67401551_67401677_67408566
ES.31075.2	chr7	-	6205	5	FSM	ENSMUSG00000030554.17	ENSMUST00000051389.10	6953	5	264	484	206	-484	multi-exon	FALSE	canonical	1	1	junction_1	2.69258240356725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGCTGACTTCCA	NA	False	NA	NA	False	AAAACA	-23	NA	67409226	67380399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67383302_67384207_67386655_67388852_67388924_67401551_67401677_67408566
ES.31075.3	chr7	-	6130	5	FSM	ENSMUSG00000030554.17	ENSMUST00000051389.10	6953	5	-103	926	-103	-926	multi-exon	FALSE	canonical	1	1	junction_1	2.69258240356725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACTAATTTTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	67409593	67380841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67383302_67384207_67386655_67388852_67388924_67401551_67401677_67408566
ES.31075.4	chr7	-	4320	5	FSM	ENSMUSG00000030554.17	ENSMUST00000051389.10	6953	5	-34	2667	-34	-85	multi-exon	FALSE	canonical	1	1	junction_1	2.69258240356725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTGTTTGCATGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	67409524	67382582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_67383302_67384207_67386655_67388852_67388924_67401551_67401677_67408566
ES.31076.1	chr7	+	5296	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-955	7068	-955	432	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGCAGCTTTTTATT	NA	False	NA	14	True	AGTAAA	-27	NA	67601619	67876348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ES.31076.10	chr7	+	8842	16	ISM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	230656	1146	-3142	-1146	3prime_fragment	FALSE	canonical	3	13	junction_1	3.45382235919696	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAGTGGTTTAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	67833230	67882270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ES.31076.11	chr7	+	7535	1	ISM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	273307	0	14296	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCCAGTTGGTT	NA	False	NA	5	True	AATAAA	-16	NA	67875881	67883416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67875900_67883400
ES.31076.12	chr7	+	2931	1	ISM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	277576	335	18565	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	67880150	67883081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_67880200_67883100
ES.31076.2	chr7	+	5122	20	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-942	434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	6.42407176648439	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCAGCTTTTTATTTC	NA	False	NA	16	True	AGTAAA	-29	NA	67601632	67876350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67858660_67858754_67861741_67861914_67875767
ES.31076.3	chr7	+	5368	22	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-934	432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.74870585850581	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAAGCAGCTTTTTATT	NA	False	NA	14	True	AGTAAA	-27	NA	67601640	67876348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67858660_67858754_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ES.31076.5	chr7	+	4999	20	NNC	ENSMUSG00000005533.11	novel	11409	21	NA	NA	-925	2507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.81572993539422	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTTGGTGGTTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	67601649	67865181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67858660_67858754_67861770_67861905_67864666
ES.31076.6	chr7	+	5482	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-917	6844	-917	656	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGAAGCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	67601657	67876572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ES.31076.7	chr7	+	178	1	Intergenic	novelGene_25543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	67727937	67728115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_67727900_67728100
ES.31076.8	chr7	+	3212	17	NNC	ENSMUSG00000005533.11	novel	733	4	NA	NA	-4737	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.31507290636732	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCAAGCAGCTTTTTA	NA	False	NA	12	True	AGTAAA	-25	NA	67831635	67876346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67831791_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ES.31076.9	chr7	+	5694	1	FSM	ENSMUSG00000005533.11	ENSMUST00000207487.2	1350	1	-4331	-13	-4331	13	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCAGGAATTTCTTATC	NA	False	NA	NA	False	NA	NA	NA	67832041	67837735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67832000_67837700
ES.31077.1	chr7	-	7963	22	Antisense	novelGene_ENSMUSG00000005533.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCTCCAACTCAGTC	NA	False	NA	NA	False	NA	NA	NA	67879666	67602532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_67602701_67653557_67654102_67814738_67815051_67819641_67819797_67822978_67823123_67833090_67833307_67834478_67834606_67836737_67836974_67839317_67839487_67839691_67839896_67842384_67842638_67843092_67843375_67844712_67844852_67845335_67845498_67850991_67851093_67851647_67851719_67856995_67857228_67857509_67857620_67861739_67861903_67864664_67864794_67868143_67868283_67875759
ES.31077.10	chr7	-	262	1	Intergenic	novelGene_25546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTGGAGGCATAGTA	NA	False	NA	NA	False	NA	NA	NA	67884658	67884396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67884400_67884700
ES.31077.11	chr7	-	158	1	Intergenic	novelGene_25547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	67905256	67905098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67905100_67905300
ES.31077.12	chr7	-	530	1	Intergenic	novelGene_25548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAATCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67906953	67906423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67906400_67907000
ES.31077.2	chr7	-	3981	18	Antisense	novelGene_ENSMUSG00000005533.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67858329	67602574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_67602701_67653557_67654102_67814738_67815051_67819641_67819797_67822978_67823123_67833090_67833307_67834478_67834606_67836737_67836974_67839317_67839487_67839691_67839896_67843091_67843375_67844712_67844852_67845335_67845498_67850991_67851093_67851647_67851719_67856995_67857228_67857509_67858186_67858245
ES.31077.4	chr7	-	2743	1	Intergenic	novelGene_25542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGGGGTGGGGATTG	8614	False	NA	NA	False	NA	NA	NA	67711572	67708829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67708800_67711600
ES.31077.5	chr7	-	1307	7	NNC	ENSMUSG00000030553.4	novel	953	4	NA	NA	49	40538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGCGTGACACCTCCG	NA	False	NA	NA	False	NA	NA	NA	67913932	67845819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_67846140_67855678_67855833_67862839_67863018_67864591_67864936_67878485_67878660_67899214_67899311_67913891
ES.31077.6	chr7	-	296	1	Intergenic	novelGene_25544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	67869855	67869559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67869600_67869900
ES.31077.7	chr7	-	177	1	Intergenic	novelGene_25545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	67869855	67869678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67869700_67869900
ES.31077.8	chr7	-	661	4	NNC	ENSMUSG00000030553.4	novel	953	4	NA	NA	14639	8950	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACGGTCTAACATAGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	67899342	67877407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_67877644_67878485_67878660_67888819_67888943_67899214
ES.31077.9	chr7	-	1465	4	NNC	ENSMUSG00000030553.4	novel	953	4	NA	NA	21	8945	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.471404520791032	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTCACGGTCTAACA	NA	False	NA	NA	False	ATTAAA	-15	NA	67913960	67877412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_67878660_67899214_67899311_67908984_67909038_67913891
ES.31078.1	chr7	+	180	1	Intergenic	novelGene_25549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	67914964	67915144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_67915000_67915100
ES.31079.1	chr7	-	5685	1	NIC	ENSMUSG00000086628.8	novel	534	4	NA	NA	-66	-2528	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACATAAAAATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	67924912	67919227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_67919200_67924900
ES.31079.2	chr7	-	171	1	Intergenic	novelGene_25550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGGATGCCTGAGA	NA	False	NA	NA	False	NA	NA	NA	67921145	67920974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67921000_67921100
ES.3108.1	chr10	+	761	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	368	1907	-95	56	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTGTTTTGTTTTGT	1770	False	NA	41	True	AATAAA	-28	NA	75353752	75371308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ES.3108.2	chr10	+	3819	2	FSM	ENSMUSG00000020180.11	ENSMUST00000191097.2	665	2	-19	-3135	-19	3135	multi-exon	FALSE	canonical	3	3739	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGAGAAACAGAATATTA	1846	False	NA	NA	False	NA	NA	NA	75353828	75358835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75353960_75355147
ES.3108.3	chr10	+	4978	1	NIC	ENSMUSG00000020180.11	novel	3036	4	NA	NA	10	3135	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGAGAAACAGAATATTA	1875	False	NA	NA	False	NA	NA	NA	75353857	75358835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75353900_75358800
ES.3108.4	chr10	+	3534	3	ISM	ENSMUSG00000020180.11	ENSMUST00000220229.2	442	4	-19	-43	10	43	intron_retention	FALSE	canonical	3	3739	junction_1	19	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGAGGCTTTTT	1875	False	NA	28	True	AATAAA	-15	NA	75353857	75371295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75353960_75355147_75355295_75368010
ES.31080.1	chr7	+	2450	6	NNC	ENSMUSG00000074071.12	novel	2821	9	NA	NA	-121	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	71.5446713599273	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTTAATAGCTTAATTT	NA	False	NA	38	True	AATAAA	-9	NA	67925621	68012820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67925688_67950580_67950712_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.10	chr7	+	2035	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-31	-623	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.7217831976321	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTGCCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	67925711	68012212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_68003356_68003492_68007932_68008037_68010989
ES.31080.11	chr7	+	1954	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-31	-623	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTGCCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	67925711	68012212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.12	chr7	+	2213	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-26	628	-26	-623	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGACTTGCCTTAGTC	NA	False	NA	NA	False	NA	NA	NA	67925716	68012212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.13	chr7	+	6363	1	FSM	ENSMUSG00000074071.12	ENSMUST00000208070.2	3984	1	-40	-2339	-26	2339	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCATTCCATTGTCT	NA	False	NA	NA	False	NA	NA	NA	67925716	67932079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67925700_67932100
ES.31080.14	chr7	+	2517	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-7	-31	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	70.9436396021518	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAAAGACCTTCCACAT	NA	False	NA	22	True	NA	NA	NA	67925735	68012804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_68003356_68003492_68007932_68008037_68010989
ES.31080.15	chr7	+	2293	5	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-7	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.1925813470685	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACCTTCCACATGT	NA	False	NA	24	True	NA	NA	NA	67925735	68012806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.16	chr7	+	2576	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-6	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	65.7387506219378	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTCCACATGTTAATAG	NA	False	NA	30	True	AATAAA	-1	NA	67925736	68012812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.17	chr7	+	4734	2	Antisense	novelGene_ENSMUSG00000109453.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGAGTCTCATGTAAC	6408	False	NA	NA	False	NA	NA	NA	67964736	67970925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_67965870_67967324
ES.31080.2	chr7	+	2641	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-43	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.7217831976321	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACCTTCCACATGT	NA	False	NA	24	True	NA	NA	NA	67925699	68012806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_68003356_68003492_68007932_68008037_68010989
ES.31080.3	chr7	+	2730	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-43	-23	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	43.556203428936	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTCCACATGTTAATAG	NA	False	NA	30	True	AATAAA	-1	NA	67925699	68012812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.4	chr7	+	2844	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	-42	13	-42	-8	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTAATTTTAGGACT	NA	False	NA	45	True	AATAAA	-16	NA	67925700	68012827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.5	chr7	+	2673	9	NNC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-42	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.2764752936452	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACCTTCCACATGT	NA	False	NA	24	True	NA	NA	NA	67925700	68012806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67979083_67979148_67999981_68000129_68003356_68003492_68007932_68008037_68010989
ES.31080.6	chr7	+	2648	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-42	-26	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCTTCCACATGTTAA	NA	False	NA	27	True	NA	NA	NA	67925700	68012809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.7	chr7	+	2749	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-33	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTTAATTTTAGGACT	NA	False	NA	45	True	AATAAA	-16	NA	67925709	68012827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ES.31080.8	chr7	+	2738	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	48.9251823643791	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925710	68012835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68010989
ES.31080.9	chr7	+	5833	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	-32	-23	intron_retention	FALSE	canonical	3	22	junction_4	47.971056088252	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTCCACATGTTAATAG	NA	False	NA	30	True	AATAAA	-1	NA	67925710	68012812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68003492_68007932_68008037_68010989
ES.31081.1	chr7	-	193	1	Intergenic	novelGene_25551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAATATCTTAC	NA	False	NA	NA	False	NA	NA	NA	67933310	67933117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_67933100_67933300
ES.31082.1	chr7	-	4025	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	-118	-2	-118	2	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGGCTCATTTTTTTC	NA	False	NA	-1	True	AATAAA	-18	NA	68399107	68386740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.11	chr7	-	6491	6	NIC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	375	junction_1	219.501252843805	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATCTGGGTGGCTCAT	NA	False	NA	-8	True	AATAAA	-11	NA	68398946	68386747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_68389282_68389632_68389788_68390702_68391650_68392319_68394678_68394892_68394960_68398516
ES.31082.12	chr7	-	5941	3	ISM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	3471	-4511	3471	-5	intron_retention	FALSE	canonical	3	759	junction_2	5.5	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATCTGGGTGGCTCAT	NA	False	NA	-8	True	AATAAA	-11	NA	68395465	68386747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_68391650_68392319_68392423_68394529
ES.31082.15	chr7	-	3731	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	17	157	17	-157	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGGTTGTGTTTTTTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	68398972	68386899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.16	chr7	-	2522	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	31	1352	-22	-1352	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTTGGTGCAATAT	NA	False	NA	NA	False	NA	NA	NA	68398958	68388094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.17	chr7	-	1097	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-40	72	13	-72	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGATCTCTAATTATT	NA	False	NA	-3	True	ATTAAA	-36	NA	68398976	68391330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.18	chr7	-	4631	4	ISM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	-30	85	23	-85	intron_retention	FALSE	canonical	3	759	junction_2	72.4998084288657	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCGATTGCAAATGTG	NA	False	NA	-16	True	ATTAAA	-23	NA	68398966	68391343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892
ES.31082.19	chr7	-	3165	4	NIC	ENSMUSG00000042659.16	novel	1129	5	NA	NA	-22	-93	intron_retention	FALSE	canonical	3	754	junction_3	73.8286303995047	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAAGCCATGCGATTG	NA	False	NA	-24	True	ATTAAA	-15	NA	68398958	68391351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_68391650_68392319_68394678_68394892_68394960_68398516
ES.31082.2	chr7	-	3746	7	NIC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	313.461853075192	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTGGCTCATTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	68398993	68386742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_68389282_68389632_68389788_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.3	chr7	-	5322	6	NIC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	25	0	intron_retention	FALSE	canonical	3	375	junction_1	180.715688306245	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTGGCTCATTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	68398964	68386742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_68389282_68389632_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.4	chr7	-	4405	7	NIC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	25	-2	intron_retention	FALSE	canonical	3	375	junction_1	205.145206026257	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGTGGCTCATTTT	NA	False	NA	-5	True	AATAAA	-14	NA	68398964	68386744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_68389282_68389632_68389788_68390702_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.6	chr7	-	3948	8	NNC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	299.62779631825	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTGGGTGGCTCATTT	NA	False	NA	-6	True	AATAAA	-13	NA	68398963	68386745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_68389282_68389632_68389788_68390630_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31082.7	chr7	-	3976	9	NNC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	319.812811461642	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTGGGTGGCTCATT	NA	False	NA	-7	True	AATAAA	-12	NA	68398985	68386746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68397549_68397629_68398516
ES.31082.8	chr7	-	3809	8	NNC	ENSMUSG00000042659.16	novel	3905	8	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	298.2074336253	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTGGGTGGCTCATT	NA	False	NA	-7	True	AATAAA	-12	NA	68398958	68386746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_68389221_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ES.31083.1	chr7	+	158	1	Intergenic	novelGene_25552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	69156732	69156890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_69156700_69156900
ES.31084.1	chr7	+	177	1	Intergenic	novelGene_25553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	69883519	69883696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_69883500_69883700
ES.31085.1	chr7	+	176	1	Intergenic	novelGene_25554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACAAAAC	7171	False	NA	NA	False	NA	NA	NA	69925348	69925524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_69925300_69925500
ES.31086.1	chr7	+	174	1	Intergenic	novelGene_25555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGACTAAAG	NA	False	NA	NA	False	NA	NA	NA	69951050	69951224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_69951000_69951200
ES.31087.1	chr7	-	5386	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	-1170	6	-1170	-6	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACAGTCCCTGTTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	70011511	70001697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_70004680_70007510_70008039_70009635
ES.31088.1	chr7	+	171	1	Intergenic	novelGene_25556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAAC	NA	False	NA	NA	False	NA	NA	NA	71375893	71376064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_71375900_71376100
ES.31089.1	chr7	+	131	1	Intergenic	novelGene_25557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	71419462	71419593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_71419500_71419600
ES.3109.1	chr10	-	159	1	Intergenic	novelGene_2441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75365691	75365532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75365500_75365700
ES.31090.1	chr7	-	6013	24	NNC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	3.17421082581634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTATCAGTACATAAC	NA	False	NA	NA	False	AATAAA	-24	NA	71956384	71727577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861474_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71937432_71937616_71956218
ES.31090.2	chr7	-	5812	24	NNC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	-30	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.55353334638305	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGGTCAATTATTTT	NA	False	NA	NA	False	AATAAA	-11	NA	71956386	71727590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71807497_71807556_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
ES.31090.3	chr7	-	4363	23	FSM	ENSMUSG00000032776.10	ENSMUST00000079323.8	5802	23	-31	1470	-31	1113	multi-exon	FALSE	canonical	1	1	junction_22	2.92220057462644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCATGTCTGTTTTAC	NA	False	NA	NA	False	NA	NA	NA	71956387	71729047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861474_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
ES.31090.4	chr7	-	4298	23	NNC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	-40	1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.24355686816569	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTTGTCATCTCATGT	NA	False	NA	NA	False	NA	NA	NA	71956396	71729056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
ES.31090.5	chr7	-	7367	17	NNC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	-57	-34343	intron_retention	FALSE	canonical	0	0	junction_8	3.36282526307865	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGTAGTGGCACACGCCT	NA	False	NA	NA	False	NA	NA	NA	71956413	71805803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
ES.31090.6	chr7	-	175	1	Intergenic	novelGene_25558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCCTCATGTCCTGGTG	NA	False	NA	NA	False	NA	NA	NA	71932739	71932564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_71932600_71932700
ES.31091.1	chr7	-	620	1	FSM	ENSMUSG00000081895.4	ENSMUST00000119383.2	555	1	-35	-30	-35	30	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAACTT	7653	False	NA	NA	False	AATAAA	-30	NA	72299094	72298474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_72298500_72299100
ES.31092.1	chr7	-	3965	3	Genic_Genomic	ENSMUSG00000108513.2	novel	3005	3	NA	NA	-178	-31021	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGACTGTGTCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	72888457	72883543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_72883877_72884724_72886774_72886874
ES.31093.1	chr7	+	2095	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-66	1557	-55	-1557	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGTTTTTGTGACAG	NA	False	NA	NA	False	NA	NA	NA	73025201	73068090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
ES.31093.2	chr7	+	3630	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	-45	1	-34	-1	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	False	NA	32	True	AGTAAA	-29	NA	73025222	73069646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
ES.31093.3	chr7	+	1154	3	ISM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	1	9998	1	450	5prime_fragment	FALSE	canonical	3	9	junction_1	6.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTCTAGTGTGGT	NA	False	NA	NA	False	TATAAA	-21	NA	73025268	73059649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_73025637_73041128_73041245_73058979
ES.31093.4	chr7	+	3422	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	2	162	2	-162	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGTGTTTGATCA	NA	False	NA	NA	False	AGTAAA	-17	NA	73025269	73069485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
ES.31093.5	chr7	+	3458	3	FSM	ENSMUSG00000070509.16	ENSMUST00000119206.3	3481	3	22	1	11	-1	multi-exon	FALSE	canonical	0	0	junction_1	14	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	False	NA	32	True	AGTAAA	-29	NA	73025278	73069646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73025637_73058979_73059498_73067064
ES.31093.6	chr7	+	3245	4	NIC	ENSMUSG00000070509.16	novel	3371	3	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.5758369027902	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	False	NA	32	True	AGTAAA	-29	NA	73040920	73069646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_73040950_73041128_73041245_73058979_73059498_73067064
ES.31093.7	chr7	+	3367	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	4	0	4	0	multi-exon	FALSE	canonical	3	22	junction_1	3	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73040978	73069647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73041245_73058979_73059498_73067064
ES.31093.8	chr7	+	3196	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	14	161	14	-161	multi-exon	FALSE	canonical	3	22	junction_1	3	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGTGTTTGATCAC	NA	False	NA	NA	False	AGTAAA	-18	NA	73040988	73069486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73041245_73058979_73059498_73067064
ES.31093.9	chr7	+	1788	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	25	1558	-24	-1558	multi-exon	FALSE	canonical	3	22	junction_1	3	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGTTTTTGTGACA	NA	False	NA	NA	False	NA	NA	NA	73040999	73068089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73041245_73058979_73059498_73067064
ES.31094.1	chr7	-	175	1	Intergenic	novelGene_25559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGAAGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	73044306	73044131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73044100_73044300
ES.31095.1	chr7	-	519	1	Antisense	novelGene_ENSMUSG00000108601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACAAATGCAATGTGAGG	NA	False	NA	NA	False	NA	NA	NA	73073563	73073044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_73073000_73073600
ES.31096.1	chr7	+	187	1	Intergenic	novelGene_25560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATAGAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	73075486	73075673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73075500_73075700
ES.31097.1	chr7	+	172	1	Antisense	novelGene_ENSMUSG00000108741.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGGAAAAAAAC	576	False	NA	NA	False	NA	NA	NA	73108860	73109032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_73108900_73109000
ES.31098.1	chr7	+	3546	1	Antisense	novelGene_ENSMUSG00000078671.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAGAAAGAA	2187	False	NA	NA	False	NA	NA	NA	73110471	73114017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_73110500_73114000
ES.31099.1	chr7	+	4514	1	Antisense	novelGene_ENSMUSG00000078671.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAGGAAAATAAAGTTAGG	NA	False	NA	NA	False	NA	NA	NA	73168554	73173068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_73168600_73173100
ES.31099.2	chr7	+	3688	1	Antisense	novelGene_ENSMUSG00000078671.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73168556	73172244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_73168600_73172200
ES.311.1	chr1	+	5723	25	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	-12	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	3.53160335006952	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTCTCACTTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	37338959	37449814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419263_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448692
ES.311.10	chr1	+	3739	10	NNC	ENSMUSG00000026113.18	novel	2934	24	NA	NA	2249	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	3.43547218527562	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATTAAACTGAGTCT	9381	False	NA	NA	False	AATAAA	-7	NA	37419001	37449805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37419259_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448692
ES.311.11	chr1	+	3194	7	NNC	ENSMUSG00000026113.18	novel	2934	24	NA	NA	11978	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	2.91070819942883	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTCTCACTTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	37428730	37449814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448623_37448669
ES.311.12	chr1	+	2044	1	ISM	ENSMUSG00000026113.18	ENSMUST00000027287.11	5691	26	108799	3	31018	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTCTCACTTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	37447770	37449814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37447800_37449800
ES.311.2	chr1	+	5631	26	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	3.43021865192294	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTCTCACTTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	37338963	37449814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448692
ES.311.3	chr1	+	3253	24	NIC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	0	60	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	2.74154482964077	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTATTTTTGTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	37338971	37447430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419142_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207
ES.311.4	chr1	+	5592	25	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	3.1554076158592	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTCACTTGATTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	37338972	37449817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419142_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448692
ES.311.5	chr1	+	5497	25	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	3.41463354142465	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTCACTTGATTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	37338972	37449817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418045_37419002_37419142_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448646_37448691
ES.311.6	chr1	+	5738	26	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	3.43021865192294	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTCACTTGATTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	37338974	37449817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419259_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448640_37448688
ES.311.8	chr1	+	5697	25	NNC	ENSMUSG00000026113.18	novel	5691	26	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	3.36959443652595	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGTCTCACTTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	37338980	37449814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37416658_37416843_37417921_37418141_37419002_37419259_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207_37448608_37448655
ES.3110.1	chr10	-	4465	4	FSM	ENSMUSG00000046807.11	ENSMUST00000051129.10	4601	4	139	-3	139	1	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCAGCGGAGTTTGTCG	NA	False	NA	NA	False	AATAAA	-26	NA	75396025	75385955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75389955_75391783_75391885_75393053_75393183_75395789
ES.3110.2	chr10	-	4526	5	NNC	ENSMUSG00000046807.11	novel	4601	4	NA	NA	141	1	intron_retention	FALSE	canonical	0	0	junction_1	1.73205080756888	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCAGCGGAGTTTGTCG	NA	False	NA	NA	False	AATAAA	-26	NA	75396023	75385955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75389955_75391608_75391672_75391783_75391885_75393053_75393183_75395789
ES.3110.3	chr10	-	4952	5	NNC	ENSMUSG00000046807.11	novel	4601	4	NA	NA	141	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.78535710713571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGCAGCGGAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	75396023	75385960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75386635_75386686_75389955_75391783_75391885_75393053_75393183_75395243
ES.31100.1	chr7	+	1510	1	Intergenic	novelGene_25562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGCAGCATGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	73180545	73182055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73180500_73182100
ES.31101.1	chr7	+	3384	1	Genic_Genomic	ENSMUSG00000108563.2	novel	NA	NA	NA	NA	-640	-14045	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATAGCTCATACCTCGA	1317	False	NA	NA	False	NA	NA	NA	73187120	73190504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_73187100_73190500
ES.31102.1	chr7	+	941	1	Antisense	novelGene_ENSMUSG00000101970.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGAAAAGGC	9131	False	NA	NA	False	NA	NA	NA	73194934	73195875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_73194900_73195900
ES.31103.1	chr7	+	199	1	Intergenic	novelGene_25563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATAAACTT	NA	False	NA	NA	False	GATAAA	-6	NA	73198967	73199166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73199000_73199200
ES.31104.1	chr7	+	3516	3	NNC	ENSMUSG00000108563.2	novel	540	4	NA	NA	14233	3599	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCCCGTCTCCTCGCT	NA	False	NA	NA	False	NA	NA	NA	73201993	73208148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_73205080_73205600_73205667_73207784
ES.31105.1	chr7	+	214	1	Intergenic	novelGene_25564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAGGAAAAGAGAGAGCA	7917	False	NA	NA	False	AATAAA	-35	NA	73263898	73264112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73263900_73264100
ES.31106.1	chr7	+	132	1	Intergenic	novelGene_25566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73270911	73271043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73270900_73271000
ES.31107.1	chr7	+	226	1	Intergenic	novelGene_25567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	73284720	73284946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73284700_73284900
ES.31108.1	chr7	-	8384	38	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-15960	-1	intron_retention	FALSE	canonical	0	0	junction_9	13.6218897442509	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGCTAACCAGTTACAT	NA	False	NA	1	True	ATTAAA	-24	NA	73169277	73076386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73104438_73104552_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224
ES.31108.10	chr7	-	6786	26	Fusion	ENSMUSG00000065729.3_ENSMUSG00000078671.12	novel	9085	39	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	10.3989230211595	296	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCTGTACTTTTTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	73295834	73076445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_73079749_73085482_73085727_73091333_73091548_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143220_73295729
ES.31108.11	chr7	-	2628	3	NNC	ENSMUSG00000078671.12	novel	745	5	NA	NA	8397	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCTGTACTTTTTTG	NA	False	NA	-13	True	ATTAAA	-15	NA	73085602	73076445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73078806_73079600_73079749_73085482
ES.31108.14	chr7	-	2977	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	69902	2518	-3257	486	3prime_fragment	FALSE	canonical	2	10	junction_11	4.50875691170958	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACACTTGGTCTCATTAT	NA	False	NA	NA	False	NA	NA	NA	73121592	73078903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544
ES.31108.15	chr7	-	5428	1	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-2604	4834	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTACCAGAACAAAAC	5636	False	NA	NA	False	NA	NA	NA	73099585	73094157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73094200_73099600
ES.31108.16	chr7	-	8493	4	NIC	ENSMUSG00000078671.12	novel	5289	15	NA	NA	-1515	4832	intron_retention	FALSE	canonical	3	19	junction_3	2.86744175568088	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGTACCAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	73106855	73094159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73097062_73098904_73101588_73102846_73102976_73104076
ES.31108.17	chr7	-	6024	33	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	1	1236	combination_of_known_junctions	FALSE	canonical	2	3	junction_28	13.6149260349625	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCGGTTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-27	NA	73191492	73097755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.18	chr7	-	5804	32	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-111	1224	combination_of_known_junctions	FALSE	canonical	1	1	junction_31	14.4529089280612	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGGTGCCACTTTCCG	NA	False	NA	NA	False	AATAAA	-15	NA	73187480	73097767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ES.31108.19	chr7	-	2917	22	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	42031	25167	2321	8	internal_fragment	FALSE	canonical	2	10	junction_5	11.0151410945722	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGAAGAAGAAAGAGAACA	NA	False	NA	NA	False	AAAAAG	-16	NA	73149463	73101552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341
ES.31108.2	chr7	-	5415	17	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	4291	-10	intron_retention	FALSE	canonical	0	0	junction_1	6.00520607473216	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGAATTGGGCTAAC	NA	False	NA	-8	True	ATTAAA	-15	NA	73124285	73076395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73079749_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253
ES.31108.20	chr7	-	4503	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	-3	61913	-3	9156	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTGTGACTGGCTTTT	NA	False	NA	NA	False	TATAAA	-25	NA	73191497	73138298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.21	chr7	-	3654	14	NNC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-13959	9150	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	11.850648497972	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTACTGGCTTGTGACTG	NA	False	NA	NA	False	TATAAA	-19	NA	73167276	73138304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73167250
ES.31108.22	chr7	-	4383	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	0	9148	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	12.7585505542322	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTACTGGCTTGTGAC	NA	False	NA	NA	False	TATAAA	-17	NA	73191493	73138306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.23	chr7	-	4209	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-82	9104	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	11.74581992516	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAACAGTTCATG	NA	False	NA	NA	False	NA	NA	NA	73187451	73138350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ES.31108.24	chr7	-	3276	12	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	27605	62174	-10572	8895	internal_fragment	FALSE	canonical	3	31	junction_10	6.07528525331041	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCTTCAGCTCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	73163889	73138559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837
ES.31108.25	chr7	-	2796	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	2	63615	1	7454	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTCTTAATAG	NA	False	NA	3	True	NA	NA	NA	73191492	73140000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.26	chr7	-	2658	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-188	7447	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	11.74581992516	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAACTTTCTGATGTTC	NA	False	NA	-4	True	NA	NA	NA	73187557	73140007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ES.31108.27	chr7	-	1976	14	NNC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-13991	7443	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.3892300771307	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGGAAACTTTCTGAT	NA	False	NA	-8	True	NA	NA	NA	73167308	73140011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153131_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73167250
ES.31108.28	chr7	-	2792	11	NNC	ENSMUSG00000078671.12	novel	1571	9	NA	NA	-15972	5816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.1767284428671	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAATGGAAATTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	73169289	73141638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73142285_73142367_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73169224
ES.31108.29	chr7	-	202	1	Intergenic	novelGene_25561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGATGTGTGTGAACA	NA	False	NA	NA	False	TATAAA	-9	NA	73168251	73168049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73168000_73168300
ES.31108.3	chr7	-	9220	39	FSM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	-145	10	-61	-10	multi-exon	FALSE	canonical	2	10	junction_11	12.1879612278661	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAGAATTGGGCTAAC	NA	False	NA	-8	True	ATTAAA	-15	NA	73191639	73076395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.30	chr7	-	5268	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-128	0	-128	0	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTGTTGTATGACT	NA	False	NA	NA	False	AATAAA	-10	NA	73208271	73189548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ES.31108.31	chr7	-	1738	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-85	3487	-85	748	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGACAGTGTAATTTAT	NA	False	NA	NA	False	ATTAAA	-11	NA	73208228	73193035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ES.31108.32	chr7	-	6775	4	NIC	ENSMUSG00000101970.9	novel	5140	5	NA	NA	-133	135	intron_retention	FALSE	canonical	3	140	junction_3	53.0471488394994	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTTTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	73208276	73193648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73194131_73199344_73205082_73205602_73205669_73207786
ES.31108.33	chr7	-	1176	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-138	4102	-138	133	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTTTTGTTTGTTTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	73208281	73193650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ES.31108.34	chr7	-	6677	4	NIC	ENSMUSG00000101970.9	novel	5140	5	NA	NA	-170	0	intron_retention	FALSE	canonical	3	140	junction_3	53.0471488394994	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	73208313	73193783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73194131_73199344_73205082_73205602_73205669_73207786
ES.31108.35	chr7	-	6335	4	NIC	ENSMUSG00000101970.9	novel	519	5	NA	NA	14	0	intron_retention	FALSE	canonical	3	58	junction_3	89.8900563033655	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	73207707	73193783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73194131_73199344_73205082_73205602_73205669_73207522
ES.31108.36	chr7	-	11886	3	FSM	ENSMUSG00000101970.9	ENSMUST00000184655.4	602	3	-174	-11110	-165	0	multi-exon	FALSE	canonical	3	140	junction_2	39	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	73208308	73193783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73205082_73205602_73205669_73207786
ES.31108.37	chr7	-	761	5	FSM	ENSMUSG00000101970.9	ENSMUST00000187421.7	519	5	-19	-223	-19	1	multi-exon	FALSE	canonical	3	58	junction_4	79.8780320238299	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCTCAGTTTGGGC	NA	False	NA	-11	True	AATAAA	-14	NA	73207740	73193788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207522
ES.31108.38	chr7	-	1179	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-279	4240	-279	1	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTCTCAGTTTGGGC	NA	False	NA	-11	True	AATAAA	-14	NA	73208422	73193788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ES.31108.4	chr7	-	7628	2	ISM	ENSMUSG00000078671.12	ENSMUST00000208458.2	745	5	4196	-2948	4196	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73089803	73076441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73079749_73085482
ES.31108.40	chr7	-	8485	1	Genic_Genomic	ENSMUSG00000101970.9	novel	NA	NA	NA	NA	-146	5089	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGATTGATTATATAT	NA	False	NA	NA	False	AAAAAG	-9	NA	73208289	73199804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_73199800_73208300
ES.31108.41	chr7	-	5801	3	FSM	ENSMUSG00000101970.9	ENSMUST00000184655.4	602	3	-138	-5061	-129	5061	multi-exon	FALSE	canonical	3	140	junction_2	39	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	73208272	73199832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73205082_73205602_73205669_73207786
ES.31108.42	chr7	-	3348	1	Intergenic	novelGene_25565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAAAAAGTCTC	NA	False	NA	NA	False	AAAAAG	-43	NA	73268876	73265528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73265500_73268900
ES.31108.43	chr7	-	189	1	Intergenic	novelGene_25568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	73292684	73292495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73292500_73292700
ES.31108.5	chr7	-	9196	40	NNC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	13.2822987799928	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73191492	73076441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73097142_73097312_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.6	chr7	-	9076	38	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-71	0	intron_retention	FALSE	canonical	2	3	junction_33	12.7511439782411	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73191649	73076441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31108.7	chr7	-	8945	40	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	12.7172766571809	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73191499	73076441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_73079749_73085482_73085727_73091333_73091428_73091516_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ES.31109.1	chr7	+	206	1	Intergenic	novelGene_25569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	73296197	73296403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73296200_73296400
ES.3111.1	chr10	+	2271	16	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	137.069228251031	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTCTTGTGTATGAA	NA	False	NA	37	True	NA	NA	NA	75397394	75422035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75397482_75397567_75397641_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.10	chr10	+	2133	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.650286311549	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCATGGACTTTAGTG	NA	False	NA	24	True	NA	NA	NA	75399925	75422022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.13	chr10	+	2284	16	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-54	42819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	137.899802594331	333	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGTGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	75399927	75464853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410067_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714_75422029_75464833
ES.3111.15	chr10	+	2152	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.250609909777	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75399932	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420761_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.16	chr10	+	2273	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.053538501249	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCCATATCATGGACT	NA	False	NA	18	True	AATAAA	-41	NA	75399933	75422016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.17	chr10	+	2364	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.035666863372	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCATGGACTTTAGTGT	NA	False	NA	25	True	NA	NA	NA	75399933	75422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400216_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.19	chr10	+	5654	14	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-48	1	intron_retention	FALSE	canonical	0	0	junction_2	126.228636366925	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	28	True	NA	NA	NA	75399933	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75420842_75420991_75421127_75421220_75421334_75421424_75421539_75421714
ES.3111.2	chr10	+	2385	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-103	61	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.4297600962574	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTACCGTGATGTTAA	NA	False	NA	97	True	NA	NA	NA	75399878	75422095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.20	chr10	+	2323	16	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-48	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	142.009764922463	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	28	True	NA	NA	NA	75399933	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400490_75400573_75400671_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.23	chr10	+	2417	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.866028886431	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCATGGACTTTAGTGT	NA	False	NA	25	True	NA	NA	NA	75399938	75422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400490_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.26	chr10	+	2345	16	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.816078979271	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75399939	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75409665_75409778_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.27	chr10	+	2291	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.09013133679	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTGTCTTGTGTATG	NA	False	NA	35	True	NA	NA	NA	75399939	75422033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421127_75421220_75421334_75421424_75421539_75421714
ES.3111.28	chr10	+	2135	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.94833140844	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCATGGACTTTAGTG	NA	False	NA	24	True	NA	NA	NA	75399940	75422022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75399981_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.29	chr10	+	2347	14	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-41	0	intron_retention	FALSE	canonical	0	0	junction_2	123.204309077028	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCCATATCATGGACT	NA	False	NA	18	True	AATAAA	-41	NA	75399940	75422016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411917_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.3	chr10	+	2297	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-97	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.844161410238	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTTAGTGTCTTGTGT	NA	False	NA	32	True	NA	NA	NA	75399884	75422030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.30	chr10	+	4152	23	Fusion	ENSMUSG00000006344.18_ENSMUSG00000006345.11	novel	2167	13	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_2	164.148944660201	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTGGTGGTTCTAAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	75399941	75451021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75438807_75438904_75439800_75440011_75440476_75440635_75441089_75441237_75444584_75444722_75445032_75445786_75445946_75446066_75446261_75446373_75450563
ES.3111.32	chr10	+	3222	15	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-39	965	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	105.112985857687	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGGCAGCCCCTCATGC	NA	False	NA	NA	False	NA	NA	NA	75399942	75422999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.33	chr10	+	2362	14	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-38	-2	intron_retention	FALSE	canonical	0	0	junction_2	125.056011119657	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTTCCATATCATGGA	NA	False	NA	16	True	AATAAA	-39	NA	75399943	75422014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.35	chr10	+	2352	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.94833140844	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTTCCATATCATGGA	NA	False	NA	16	True	AATAAA	-39	NA	75399950	75422014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400216_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.36	chr10	+	2023	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.339257108069	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTGTCTTGTGTAT	NA	False	NA	34	True	NA	NA	NA	75399957	75422032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75399981_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420761_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.38	chr10	+	2131	16	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	72	42819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	134.380289559973	333	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGTGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	75400060	75464853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400671_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714_75422024_75464833
ES.3111.39	chr10	+	2212	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	184	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.410871972806	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75400172	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400288_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.4	chr10	+	2381	14	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-87	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	113.6801284202	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75399894	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400671_75400739_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.41	chr10	+	2329	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	352	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.410871972806	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	NA	False	NA	26	True	NA	NA	NA	75400340	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400573_75400654_75400740_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.42	chr10	+	2059	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	94.4407393789241	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCCATATCATGGACT	NA	False	NA	18	True	AATAAA	-41	NA	75402131	75422016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75402184_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.43	chr10	+	2355	15	NNC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.467371154774	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCATGGACTTTAGTGT	NA	False	NA	25	True	NA	NA	NA	75404441	75422023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75404477_75404519_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.45	chr10	+	2152	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	120	junction_2	78.6791101046771	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	28	True	NA	NA	NA	75404466	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75404605_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.46	chr10	+	2452	13	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	2	1	intron_retention	FALSE	canonical	3	138	junction_1	63.2499451031821	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	28	True	NA	NA	NA	75404469	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.47	chr10	+	2015	13	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	120.775848395097	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	NA	False	NA	28	True	NA	NA	NA	75404471	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75404601_75409444_75409583_75410062_75410231_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.48	chr10	+	2356	14	NIC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.7702044712644	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTGTCTTGTGTATG	NA	False	NA	35	True	NA	NA	NA	75404471	75422033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75404804_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.5	chr10	+	2870	14	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-87	0	intron_retention	FALSE	canonical	0	0	junction_1	94.4407393789241	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75399894	75422034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.51	chr10	+	2304	15	NNC	ENSMUSG00000006345.11	novel	2140	14	NA	NA	23	42819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	110.772265924098	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGTGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	75404530	75464853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75404804_75409444_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714_75422024_75464833
ES.3111.52	chr10	+	2072	9	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-62	-1	intron_retention	FALSE	canonical	1	7	junction_5	114.945639325726	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGGACTTTAGTGTC	1811	False	NA	26	True	NA	NA	NA	75411847	75422024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75411915_75412049_75412137_75414562_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.54	chr10	+	2159	5	ISM	ENSMUSG00000006345.11	ENSMUST00000006508.10	2167	13	10068	-10	-1589	1	3prime_fragment	FALSE	canonical	3	322	junction_2	17.8675683852056	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGGACTTTAGTGTCTT	9313	False	NA	28	True	NA	NA	NA	75419349	75422026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.3111.55	chr10	+	180	1	Intergenic	novelGene_2445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGAATCTGTGCTC	7144	False	NA	NA	False	NA	NA	NA	75437196	75437376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75437200_75437400
ES.3111.7	chr10	+	2254	14	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-62	-1	intron_retention	FALSE	canonical	0	0	junction_2	120.942452939722	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTGTCTTGTGTATG	NA	False	NA	35	True	NA	NA	NA	75399919	75422033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75399964_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421334_75421424_75421539_75421714
ES.3111.8	chr10	+	2457	16	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-58	42819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	137.069228251031	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCATGTGTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	75399923	75464853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400490_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714_75422029_75464833
ES.3111.9	chr10	+	2258	15	NNC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.914204698866	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTCTTGTGTATGAA	NA	False	NA	37	True	NA	NA	NA	75399925	75422035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75400093_75400654_75400740_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417150_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ES.31110.1	chr7	-	209	1	Intergenic	novelGene_25570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATTTTAAATAAATTAA	8401	False	NA	NA	False	AAGAAA	-7	NA	73302549	73302340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73302300_73302500
ES.31111.1	chr7	-	179	1	Intergenic	novelGene_25571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGTGGTGGCACACGCC	1545	False	NA	NA	False	NA	NA	NA	73309405	73309226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73309200_73309400
ES.31112.1	chr7	-	3646	1	Genic_Genomic	ENSMUSG00000108550.2	novel	NA	NA	NA	NA	-3505	-1951	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTATCCATAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	73325643	73321997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_73322000_73325600
ES.31113.1	chr7	-	1245	1	Intergenic	novelGene_25572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGTTCAATCGTTCG	NA	False	NA	NA	False	ATTAAA	-15	NA	73333759	73332514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73332500_73333800
ES.31114.1	chr7	-	1323	1	FSM	ENSMUSG00000108337.2	ENSMUST00000205991.2	1108	1	4	-219	4	219	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	73336345	73335022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73335000_73336300
ES.31115.1	chr7	+	2710	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	-28	1	-28	-1	multi-exon	FALSE	canonical	3	29	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGAGTCACGAGTGTGC	NA	False	NA	NA	False	AATAAA	-31	NA	73390021	73426666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_73390577_73416234_73416367_73424643
ES.31116.1	chr7	-	6923	1	FSM	ENSMUSG00000091890.3	ENSMUST00000205693.2	3096	1	105	-3932	-2	3932	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTTATCTGTCTGTAG	NA	False	NA	NA	False	NA	NA	NA	73390667	73383744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73383700_73390700
ES.31117.1	chr7	-	174	1	Intergenic	novelGene_25573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATACGAGAGAGGGA	1567	False	NA	NA	False	NA	NA	NA	73420972	73420798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73420800_73421000
ES.31118.1	chr7	-	319	1	Intergenic	novelGene_25574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	427	False	NA	NA	False	NA	NA	NA	73422112	73421793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73421800_73422100
ES.31119.1	chr7	+	1071	2	Intergenic	novelGene_25575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	73502194	73519407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73502460_73518601
ES.3112.1	chr10	-	170	1	Intergenic	novelGene_2442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	75403110	75402940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75402900_75403100
ES.31120.1	chr7	+	3988	1	Genic_Genomic	ENSMUSG00000102384.2	novel	NA	NA	NA	NA	9437	3805	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCATGCTATGGGATTT	NA	False	NA	NA	False	NA	NA	NA	73607607	73611595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_73607600_73611600
ES.31121.1	chr7	-	5352	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	16	0	16	0	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTGTCTATAGAGGC	NA	False	NA	NA	False	NA	NA	NA	73663406	73588866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
ES.31121.2	chr7	-	2890	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	-33	2511	-17	-2511	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTATTATCTTGAAGA	NA	False	NA	NA	False	GATAAA	-14	NA	73663455	73591377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
ES.31121.3	chr7	-	625	3	ISM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	-33	32677	-17	-10945	5prime_fragment	FALSE	canonical	3	8	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAGGTTTCATCTAT	NA	False	NA	NA	False	AATAAA	-15	NA	73663455	73621543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_73621795_73626405_73626469_73663144
ES.31121.4	chr7	-	157	1	Intergenic	novelGene_25576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73625693	73625536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73625500_73625700
ES.31121.5	chr7	-	6136	1	Intergenic	novelGene_25577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTCTCTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	73640285	73634149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73634100_73640300
ES.31122.1	chr7	+	172	1	Intergenic	novelGene_25578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73894700	73894872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_73894700_73894900
ES.31123.1	chr7	-	3024	11	FSM	ENSMUSG00000025790.15	ENSMUST00000098371.9	2709	11	-315	0	-168	0	multi-exon	FALSE	canonical	0	0	junction_1	1.86815416922694	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTCATGTTGTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	74204696	73925166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73925837_73934174_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ES.31123.2	chr7	-	4779	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	-192	2	-26	-2	multi-exon	FALSE	canonical	0	0	junction_7	1.82574185835055	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATGATTTCCATGAGT	NA	False	NA	NA	False	TATAAA	-18	NA	74204554	73931607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ES.31123.3	chr7	-	4653	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	-182	118	-16	-118	multi-exon	FALSE	canonical	0	0	junction_7	1.82574185835055	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTGTATCTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	74204544	73931723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ES.31123.4	chr7	-	3417	10	NNC	ENSMUSG00000025790.15	novel	4589	10	NA	NA	-29	-1362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.85259244450367	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTATTGTAATTTTC	NA	False	NA	NA	False	TATAAA	-18	NA	74204557	73932967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_73934418_73946968_73947029_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ES.31123.5	chr7	-	2418	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	-183	2354	-17	-2354	multi-exon	FALSE	canonical	0	0	junction_7	1.82574185835055	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	74204545	73933959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ES.31123.6	chr7	-	177	1	Intergenic	novelGene_25579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	7518	False	NA	NA	False	NA	NA	NA	73988862	73988685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_73988700_73988900
ES.31124.1	chr7	+	2694	1	Intergenic	novelGene_25580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATGCAGAGAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	74394306	74397000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_74394300_74397000
ES.31125.1	chr7	+	4657	1	Intergenic	novelGene_25581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	74832248	74836905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_74832200_74836900
ES.31126.1	chr7	+	158	1	Intergenic	novelGene_25582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	75012956	75013114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_75013000_75013100
ES.31127.1	chr7	+	4772	8	ISM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	1	139061	1	2254	5prime_fragment	FALSE	canonical	3	11	junction_4	3.52252228741084	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCACTGCCTGTATTTC	NA	False	NA	NA	False	AATAAA	-28	NA	75105282	75265296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668
ES.31127.10	chr7	+	4766	24	NNC	ENSMUSG00000066406.17	novel	12543	37	NA	NA	-13806	-5397	intron_retention	FALSE	canonical	2	5	junction_10	6.12009612339106	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCTTCTTGCCCAATTC	NA	False	NA	NA	False	AATAAA	-22	NA	75326887	75398960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375721_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396510_75396559_75397325
ES.31127.11	chr7	+	7202	24	ISM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	231703	198	-3709	-198	3prime_fragment	FALSE	canonical	3	18	junction_2	4.15803137948008	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTATAGTAATTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	75336984	75404159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.13	chr7	+	4648	22	NNC	ENSMUSG00000066406.17	novel	12543	37	NA	NA	1893	-2549	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	5.78566529471714	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGTTTGTGTTGTGT	NA	False	NA	NA	False	TTTAAA	-27	NA	75347118	75401808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375721_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.14	chr7	+	2619	1	FSM	ENSMUSG00000108633.2	ENSMUST00000205317.2	1298	1	-1319	-2	-1319	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAGAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75356313	75358932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_75356300_75358900
ES.31127.15	chr7	+	2935	1	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	13101	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAGCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75364845	75367780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75364800_75367800
ES.31127.16	chr7	+	6425	15	ISM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	271435	3	24972	-3	3prime_fragment	FALSE	canonical	3	19	junction_4	3.99297853124962	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCTGCCGTGATGTAT	NA	False	NA	0	True	AATAAA	-15	NA	75376716	75404354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.17	chr7	+	5879	11	NIC	ENSMUSG00000066406.17	novel	12543	37	NA	NA	28557	-2	intron_retention	FALSE	canonical	3	19	junction_1	4.45533388198909	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGCCGTGATGTATT	NA	False	NA	1	True	AATAAA	-16	NA	75380301	75404355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75380360_75385460_75385538_75386033_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.18	chr7	+	8694	7	ISM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	280646	0	34183	0	intron_retention	FALSE	canonical	3	21	junction_6	2.68741924943285	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCGTGATGTATTTG	NA	False	NA	3	True	AATAAA	-18	NA	75385927	75404357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507
ES.31127.2	chr7	+	9148	36	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	5	-3324	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	5.12457066394795	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGCACTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	75105286	75401033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.3	chr7	+	12468	36	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	5.12457066394795	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCGTGATGTATTTG	NA	False	NA	3	True	AATAAA	-18	NA	75105290	75404357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.4	chr7	+	12375	37	NNC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.92017983067556	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCCGTGATGTATTT	NA	False	NA	2	True	AATAAA	-17	NA	75105305	75404356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229233_75229547_75235904_75236089_75252533_75252727_75258232_75259691_75259783_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.5	chr7	+	9123	36	NNC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	1	-3324	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	5.78710741604974	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTCTGCACTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	75105305	75401033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375721_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.6	chr7	+	1216	4	ISM	ENSMUSG00000066406.17	ENSMUST00000208187.2	1381	6	49	22919	49	6	5prime_fragment	FALSE	canonical	3	13	junction_3	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCCTGTTTCTGTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	75105353	75230130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249
ES.31127.7	chr7	+	4548	11	NIC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	-1368	32	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	3.3	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCCACATGTTAG	NA	False	NA	NA	False	NA	NA	NA	75258418	75367819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517
ES.31127.8	chr7	+	8296	30	NNC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	-1004	-2547	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	5.43538413669507	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTTGTGTTGTGTTT	NA	False	NA	NA	False	TTTAAA	-29	NA	75258782	75401810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396510_75396559_75397325_75397776_75398927_75399259_75400321
ES.31127.9	chr7	+	6102	30	NNC	ENSMUSG00000066406.17	novel	12597	38	NA	NA	95	-2575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	6.32229883385702	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGCCTAAATTTGTT	NA	False	NA	NA	False	TTTAAA	-1	NA	75260945	75401782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375865_75376719_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ES.31128.1	chr7	-	3002	1	Intergenic	novelGene_25583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	75147948	75144946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75144900_75147900
ES.31129.1	chr7	-	3873	1	Antisense	novelGene_ENSMUSG00000066406.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAAGAGTACTTAATGAA	NA	False	NA	NA	False	NA	NA	NA	75349381	75345508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_75345500_75349400
ES.31129.2	chr7	-	1257	1	Antisense	novelGene_ENSMUSG00000066406.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCAAAATAAACAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	75349381	75348124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_75348100_75349400
ES.3113.1	chr10	-	174	1	Intergenic	novelGene_2443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75410656	75410482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75410500_75410700
ES.31130.1	chr7	-	173	1	Intergenic	novelGene_25584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAACCTGACA	NA	False	NA	NA	False	NA	NA	NA	75395847	75395674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75395700_75395800
ES.31131.1	chr7	-	598	1	FSM	ENSMUSG00002076060.1	ENSMUST00020181771.1	110	1	96	-584	96	584	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	75407020	75406422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_75406400_75407000
ES.31132.1	chr7	-	10417	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	-7408	0	2645	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75429202	75418785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_75418800_75429200
ES.31132.2	chr7	-	1387	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	-9	-722	-9	-2	multi-exon	FALSE	canonical	3	19	junction_1	6.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGTAGTGGTCTTGC	NA	False	NA	-2	True	NA	NA	NA	75431856	75418787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_75419986_75430372_75430505_75431799
ES.31132.3	chr7	-	8345	3	NNC	ENSMUSG00000097415.3	novel	656	3	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGTGGTAGTGGTCTT	NA	False	NA	-4	True	NA	NA	NA	75431867	75418789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_75422675_75426112_75430505_75431799
ES.31132.4	chr7	-	4304	4	NNC	ENSMUSG00000097415.3	novel	656	3	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.084944665313	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATTGTGGTAGTGGTC	NA	False	NA	-6	True	NA	NA	NA	75431837	75418791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_75419986_75426766_75429707_75430372_75430505_75431799
ES.31133.1	chr7	-	138	1	Intergenic	novelGene_25585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75439511	75439373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75439400_75439500
ES.31134.1	chr7	-	275	1	Intergenic	novelGene_25586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAAAACAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	75469065	75468790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75468800_75469100
ES.31135.1	chr7	+	3505	4	NNC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	-1136	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.6846079563875	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCATGGCTATGTTG	NA	False	NA	33	True	AATAAA	-34	NA	75496921	75523895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75497077_75497202_75497298_75515084_75516890_75522445
ES.31135.2	chr7	+	3414	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	6	-17	6	17	multi-exon	FALSE	canonical	3	36	junction_1	5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCATGGCTATGTTGA	NA	False	NA	34	True	AATAAA	-35	NA	75498063	75523896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_75498222_75515084_75516890_75522445
ES.31135.3	chr7	+	5861	1	NIC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	-13	-11442	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCAGCTATCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	75498072	75503933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_75498100_75503900
ES.31135.4	chr7	+	3393	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	9	-17	6	16	multi-exon	FALSE	canonical	3	14	junction_1	16	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCATGGCTATGTTG	NA	False	NA	33	True	AATAAA	-34	NA	75498094	75523895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_75498233_75515084_75516890_75522445
ES.31135.5	chr7	+	2292	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	18	-11	-5	11	multi-exon	FALSE	canonical	3	14	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCAAGTGACTTATC	NA	False	NA	NA	False	AATAAA	-29	NA	75498106	75517250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_75498233_75515084
ES.31135.6	chr7	+	3408	3	NNC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGGTTCTGATTC	NA	False	NA	17	True	AATAAA	-18	NA	75498120	75523879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75498290_75515084_75516890_75522445
ES.31135.7	chr7	+	2245	2	ISM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	89	6625	2	15	5prime_fragment	FALSE	canonical	3	36	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTGACTTATCGGGT	NA	False	NA	NA	False	AATAAA	-33	NA	75498146	75517254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_75498222_75515084
ES.31135.8	chr7	+	3471	3	NNC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	14354	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTCCTTTGGGTTCTGA	NA	False	NA	14	True	AATAAA	-15	NA	75512542	75523876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_75512778_75515084_75516890_75522445
ES.31136.1	chr7	-	171	1	Intergenic	novelGene_25587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75521968	75521797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75521800_75522000
ES.31137.1	chr7	-	4503	2	Intergenic	novelGene_25588	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTGATTTCTCATTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	75646254	75632644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_75636897_75646003
ES.31138.1	chr7	+	3288	1	Intergenic	novelGene_25589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTTCTCTATGTGA	NA	False	NA	NA	False	NA	NA	NA	75920060	75923348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_75920100_75923300
ES.31139.1	chr7	+	2914	1	Intergenic	novelGene_25590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTGTGGTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	76590650	76593564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_76590600_76593600
ES.3114.1	chr10	-	468	1	Intergenic	novelGene_2444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCCAGAGAGGGAATGC	9970	False	NA	NA	False	NA	NA	NA	75424489	75424021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75424000_75424500
ES.31140.1	chr7	-	792	1	ISM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	401628	30	15963	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAATAAAACAACA	NA	False	NA	-21	True	NA	NA	NA	77826528	77825736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_77825700_77826500
ES.31141.1	chr7	+	2518	1	Intergenic	novelGene_25591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTGCCTGCCACAC	NA	False	NA	NA	False	NA	NA	NA	77905296	77907814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_77905300_77907800
ES.31142.1	chr7	+	2782	1	Intergenic	novelGene_25593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAGAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	78065865	78068647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78065900_78068600
ES.31143.1	chr7	+	959	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-267	1513	-267	-1513	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCGAGCTATTTCCTGA	NA	False	NA	13	True	AATAAA	-20	NA	78228310	78229269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78228300_78229300
ES.31144.1	chr7	+	1201	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	1006	-2	1006	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGAAGACTCGGCACC	NA	False	NA	NA	False	NA	NA	NA	78229583	78230784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78229600_78230800
ES.31145.1	chr7	-	3590	1	ISM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	389813	9047	4148	-4123	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATACGTGCATCTCATG	NA	False	NA	NA	False	NA	NA	NA	77838343	77834753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_77834800_77838300
ES.31145.10	chr7	-	3658	14	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6860	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	10.4036861924287	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78235306	77950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.11	chr7	-	3824	15	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	10.2342462310796	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78228155	77950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78228124
ES.31145.12	chr7	-	3586	10	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-12227	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.3333333333333	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78114098	77950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78113691
ES.31145.13	chr7	-	4255	15	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	10.6466915432132	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78228152	77950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227855_78227998
ES.31145.15	chr7	-	3821	14	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	12.8509894169314	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78228161	77950437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227998
ES.31145.17	chr7	-	5208	13	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6869	-3	intron_retention	FALSE	canonical	1	3	junction_12	10.8278832444553	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCATCAGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	78235315	77950440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.2	chr7	-	8064	17	FSM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	54	11585	49	4836	multi-exon	FALSE	canonical	1	2	junction_5	14.7690554877419	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGTTTCTCAACATCA	NA	False	NA	NA	False	ATTAAA	-17	NA	78228102	77837291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ES.31145.20	chr7	-	3825	13	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6914	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	13.8691804612481	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCATCAGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	78235360	77950440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78227283_78227547_78235178
ES.31145.21	chr7	-	4091	16	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6820	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	12.432216214336	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGCATCAGACCTC	NA	False	NA	NA	False	AATAAA	-18	NA	78235266	77950440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78234197_78234411_78235178
ES.31145.22	chr7	-	3757	14	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.9966465679506	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGACTGCATCAGACC	NA	False	NA	NA	False	AATAAA	-16	NA	78227557	77950442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_78005774_78005964_78064149_78064243_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ES.31145.24	chr7	-	3618	12	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-39269	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.0034430322345	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGACTGCATCAGACC	NA	False	NA	NA	False	AATAAA	-16	NA	78141140	77950442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78140900
ES.31145.25	chr7	-	3763	15	NNC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6935	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	14.9025747672635	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAATGACTGCATCAGA	NA	False	NA	NA	False	AATAAA	-14	NA	78235381	77950444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78118545_78118583_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.26	chr7	-	3910	15	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	28	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	10.6466915432132	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAATGACTGCATCAG	NA	False	NA	NA	False	AATAAA	-13	NA	78228123	77950445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227998
ES.31145.27	chr7	-	3503	13	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6848	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	12.8482056680647	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAATGACTGCATCAG	NA	False	NA	NA	False	AATAAA	-13	NA	78235294	77950445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.28	chr7	-	1675	14	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	-6818	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	10.4036861924287	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	78235264	77952378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.29	chr7	-	3665	1	Intergenic	novelGene_25592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATGCTCAAGGAAGGG	NA	False	NA	NA	False	TTTAAA	-42	NA	77992634	77988969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_77989000_77992600
ES.31145.3	chr7	-	4678	18	NNC	ENSMUSG00000059146.13	novel	2678	18	NA	NA	-4	1965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.2768011616338	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTACTCCTCTTATTACT	NA	False	NA	NA	False	NA	NA	NA	78228160	77840162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127615_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78228115
ES.31145.30	chr7	-	4142	1	Genic_Genomic	ENSMUSG00000059146.13	novel	NA	NA	NA	NA	1347	2990	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAATATTTACCATTT	NA	False	NA	NA	False	AATAAA	-21	NA	78100524	78096382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_78096400_78100500
ES.31145.31	chr7	-	1948	4	NNC	ENSMUSG00000059146.13	novel	3091	11	NA	NA	-6853	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGGGTGCCGAGTC	NA	False	NA	NA	False	NA	NA	NA	78235299	78230813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78232252_78232386_78232507_78234197_78234467_78235178
ES.31145.4	chr7	-	3581	18	FSM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	-653	-250	-34	223	multi-exon	FALSE	canonical	1	1	junction_2	15.7264681129603	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGGCCCGTGCTTTT	NA	False	NA	NA	False	AATGAA	-14	NA	78228190	77841904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ES.31145.5	chr7	-	2717	17	NIC	ENSMUSG00000059146.13	novel	19703	17	NA	NA	-6820	220	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	15.5652607992928	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGCTGTGGCCCGTGCT	NA	False	NA	NA	False	AATGAA	-11	NA	78235266	77841907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.6	chr7	-	2711	16	NNC	ENSMUSG00000059146.13	novel	19703	17	NA	NA	-6820	217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.2615712020603	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTAAGCTGTGGCCCGT	NA	False	NA	NA	False	AATGAA	-8	NA	78235266	77841910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101716_78110019_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78235178
ES.31145.7	chr7	-	3500	17	FSM	ENSMUSG00000059146.13	ENSMUST00000039431.14	19703	17	-7	16210	-7	211	multi-exon	FALSE	canonical	1	2	junction_5	14.7690554877419	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTTGACTTAAGCTGTG	NA	False	NA	NA	False	AATGAA	-2	NA	78228163	77841916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ES.31145.8	chr7	-	1889	12	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	116687	-66	-8979	39	3prime_fragment	FALSE	canonical	1	1	junction_2	17.72657341278	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGTAAGGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	78110850	77842088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792
ES.31146.1	chr7	+	177	1	Intergenic	novelGene_25594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGATATCATATGCTA	NA	False	NA	NA	False	NA	NA	NA	78287781	78287958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78287800_78288000
ES.31147.1	chr7	+	222	1	Intergenic	novelGene_25595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTCTCCAACCTGACCT	NA	False	NA	NA	False	NA	NA	NA	78425739	78425961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78425700_78426000
ES.31148.1	chr7	+	860	7	NNC	ENSMUSG00000030611.11	novel	1056	6	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.35500915829	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78432862	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78432906_78433104_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ES.31148.10	chr7	+	4489	3	FSM	ENSMUSG00000030611.11	ENSMUST00000132922.2	792	3	-14	-3683	1	-1	multi-exon	FALSE	canonical	3	364	junction_2	48	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433104	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78433172_78433320_78433429_78438422
ES.31148.2	chr7	+	1049	6	FSM	ENSMUSG00000030611.11	ENSMUST00000133553.8	825	6	-225	1	12	-1	multi-exon	FALSE	canonical	3	70	junction_2	143.488814895099	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78432878	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ES.31148.3	chr7	+	1046	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	12	-2	12	2	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGAGTTTTTGTTCCC	NA	False	NA	5	True	AATAAA	-18	NA	78432878	78442739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ES.31148.4	chr7	+	1573	5	ISM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	184	1	-10	-1	intron_retention	FALSE	canonical	3	364	junction_2	38.5381304684075	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433050	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621
ES.31148.5	chr7	+	2677	4	FSM	ENSMUSG00000030611.11	ENSMUST00000136001.8	548	4	-64	-2065	-7	-1	multi-exon	FALSE	canonical	3	364	junction_2	42.7083130081252	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433053	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384
ES.31148.6	chr7	+	8385	3	NIC	ENSMUSG00000030611.11	novel	1056	6	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	399	junction_2	30.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGCTGTGAGTTTTTG	NA	False	NA	0	True	AATAAA	-13	NA	78433093	78442734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78433172_78433320_78440515_78441621
ES.31148.7	chr7	+	2690	5	NIC	ENSMUSG00000030611.11	novel	1056	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	364	junction_2	37.8450789403325	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433094	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78433172_78433320_78433429_78438422_78440515_78441621_78441688_78442389
ES.31148.8	chr7	+	3787	4	NIC	ENSMUSG00000030611.11	novel	1056	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	364	junction_2	43.6984617069704	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433104	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78433172_78433320_78433429_78438422_78441688_78442389
ES.31148.9	chr7	+	1930	5	NIC	ENSMUSG00000030611.11	novel	825	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	70	junction_2	158.030653672001	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	False	NA	2	True	AATAAA	-15	NA	78433104	78442736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78441688_78442389
ES.31149.1	chr7	-	1724	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	51	-641	51	641	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCTGTTGCTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	78432786	78424342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ES.31149.10	chr7	-	2555	5	NIC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	41.3098051314697	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCTTCCTTGATG	NA	False	NA	-1	True	AATAAA	-20	NA	78496959	78477219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_78477861_78483858_78484051_78489752_78489941_78492583_78494013_78496854
ES.31149.11	chr7	-	2270	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	1	-2	1	0	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCTTCCTTGATG	NA	False	NA	-1	True	AATAAA	-20	NA	78497010	78477219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.31149.12	chr7	-	1960	6	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.4829263483881	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACACTGTCTCTTCCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	78496936	78477222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78477413_78477516_78477861_78483858_78483922_78489752_78489941_78492919_78494013_78496854
ES.31149.13	chr7	-	2660	6	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	91	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.0004081615653	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACACTGTCTCTTCCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	78496920	78477222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78477861_78483858_78484051_78485386_78485534_78489752_78489941_78492583_78494013_78496854
ES.31149.14	chr7	-	2734	6	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	46	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.0004081615653	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGGACACTGTCTCTTC	NA	False	NA	-8	True	AATAAA	-13	NA	78496965	78477226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78477861_78483858_78484051_78484930_78485111_78489752_78489941_78492583_78494013_78496854
ES.31149.15	chr7	-	2075	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	-3	197	-3	-197	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCATTTTATGTCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	78497014	78477418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.31149.2	chr7	-	1143	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	46	-55	46	55	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGCTGATAGTTTCTG	NA	False	NA	NA	False	AAAAAG	-21	NA	78432791	78424928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ES.31149.3	chr7	-	2741	10	Fusion	ENSMUSG00000030612.7_ENSMUSG00000030610.14	novel	2269	5	NA	NA	32	-105	multi-exon	FALSE	canonical	0	0	junction_4	179.524749832632	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATTTGTCCTTGGTGG	NA	False	NA	-5	True	ATTAAA	-22	NA	78496979	78425088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_78425474_78430185_78430360_78431147_78431335_78432998_78433153_78477319_78477413_78477710_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.31149.4	chr7	-	1035	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	-8	107	-8	-107	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGATTTGTCCTTGGT	NA	False	NA	-7	True	ATTAAA	-20	NA	78432845	78425090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ES.31149.5	chr7	-	159	1	Intergenic	novelGene_25596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	78461491	78461332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_78461300_78461500
ES.31149.6	chr7	-	1680	1	Genic_Genomic	ENSMUSG00000030610.14	novel	NA	NA	NA	NA	11677	715	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	78472259	78470579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_78470600_78472300
ES.31149.7	chr7	-	3515	7	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	73	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	44.5782707405999	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTTTGTTTCTGTGGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	78496938	78471293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78473009_78477319_78477413_78477710_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.31149.8	chr7	-	2762	6	NNC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	52	-1071	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	37.1623465351692	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGGACTTCAGGGAAT	NA	False	NA	NA	False	NA	NA	NA	78496959	78472365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78473009_78477319_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.31149.9	chr7	-	1840	5	NIC	ENSMUSG00000030610.14	novel	1792	2	NA	NA	95	-1409	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	43.0892968148704	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTTGAGTACTTGCTGCT	NA	False	NA	NA	False	ACTAAA	-21	NA	78496916	78472703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_78473009_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ES.3115.1	chr10	-	175	1	Intergenic	novelGene_2446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAATATTAGAACC	NA	False	NA	NA	False	NA	NA	NA	75454680	75454505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75454500_75454700
ES.31150.1	chr7	+	162	1	Intergenic	novelGene_25597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAGATTGAGAGA	NA	False	NA	NA	False	NA	NA	NA	78520017	78520179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78520000_78520200
ES.31151.1	chr7	+	2099	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	-91	-1	-11	1	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545590	78558130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ES.31151.10	chr7	+	2099	5	NNC	ENSMUSG00000030609.19	novel	2007	4	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	268.978158964627	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78545694	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78545763_78552091_78552579_78555590_78555792_78556325_78556438_78556891
ES.31151.11	chr7	+	2818	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	21	2117	-3	711	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGTATTTTTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	78545695	78558840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ES.31151.12	chr7	+	1943	5	NNC	ENSMUSG00000030609.19	novel	2007	4	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	276.757565388916	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAACTGGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	78545695	78558127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78545763_78552091_78552272_78552319_78552579_78555590_78555792_78556891
ES.31151.13	chr7	+	4331	5	NNC	ENSMUSG00000030609.19	novel	4956	4	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	331.015105395509	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78545696	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78545763_78546869_78548709_78551584_78552579_78555590_78555792_78556891
ES.31151.15	chr7	+	2944	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	34	-971	17	971	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGCTGTCTTACCCTT	NA	False	NA	NA	False	NA	NA	NA	78545715	78559100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ES.31151.16	chr7	+	2211	5	NNC	ENSMUSG00000030609.19	novel	4956	4	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	330.512859053925	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545716	78558129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78545763_78546869_78546995_78551977_78552579_78555590_78555792_78556891
ES.31151.17	chr7	+	1043	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	37	927	20	89	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGAGGGTCAGGACT	NA	False	NA	NA	False	NA	NA	NA	78545718	78557202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ES.31151.18	chr7	+	4308	3	FSM	ENSMUSG00000030609.19	ENSMUST00000123824.2	4428	3	122	-2	25	2	multi-exon	FALSE	canonical	1	2	junction_1	333	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAATCTGATGGAATTG	NA	False	NA	4	True	NA	NA	NA	78545723	78560959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78555590_78555792_78556891
ES.31151.19	chr7	+	1738	5	NNC	ENSMUSG00000030609.19	novel	2007	4	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	276.757565388916	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545725	78558129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891_78557483_78557707
ES.31151.2	chr7	+	4962	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	-60	-2895	20	67	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTCTCCCA	NA	False	NA	69	True	AAAAAG	-14	NA	78545621	78561024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ES.31151.20	chr7	+	5597	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	61	-3651	-14	823	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGTCTTTGTGATGT	NA	False	NA	NA	False	NA	NA	NA	78545742	78561780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ES.31151.21	chr7	+	2122	4	NIC	ENSMUSG00000030609.19	novel	2230	4	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	310.20136828984	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAACTGGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	78545751	78558127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78545950_78552091_78552579_78555590_78555792_78556891
ES.31151.22	chr7	+	4176	4	NNC	ENSMUSG00000030609.19	novel	2230	4	NA	NA	-4	216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.029640059141	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAATTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	78545752	78557329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78548689_78551977_78552579_78555590_78555792_78556891
ES.31151.23	chr7	+	1504	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	-2	728	-2	285	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGTGGAAAGCCACTG	NA	False	NA	NA	False	NA	NA	NA	78545754	78557398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ES.31151.24	chr7	+	2280	4	NNC	ENSMUSG00000030609.19	novel	2230	4	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.029640059141	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78545755	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78546003_78551977_78552579_78555590_78555792_78556891
ES.31151.25	chr7	+	2222	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	0	8	0	-8	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAAGTGAGTGAACTG	NA	False	NA	NA	False	AATAAA	-7	NA	78545756	78558118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ES.31151.26	chr7	+	5062	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6	-2838	6	7	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGATGGAATTGTTCTT	NA	False	NA	9	True	NA	NA	NA	78545762	78560964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ES.31151.27	chr7	+	1374	4	NNC	ENSMUSG00000030609.19	novel	2230	4	NA	NA	113	217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.029640059141	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTTATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	78545869	78557330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78546003_78551977_78552579_78555590_78555792_78556891
ES.31151.28	chr7	+	2046	4	NNC	ENSMUSG00000030609.19	novel	2230	4	NA	NA	119	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	312.086882489832	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78545875	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78546003_78552091_78552579_78555590_78555792_78556891
ES.31151.29	chr7	+	2160	4	NNC	ENSMUSG00000030609.19	novel	534	3	NA	NA	-911	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	312.086882489832	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78546867	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78546995_78551977_78552579_78555590_78555792_78556891
ES.31151.3	chr7	+	2139	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	-11	2828	-11	0	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545663	78558129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ES.31151.30	chr7	+	6048	3	NNC	ENSMUSG00000030609.19	novel	534	3	NA	NA	325	1	intron_retention	FALSE	non_canonical	0	0	junction_1	334	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAACTGGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	78548103	78558127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78548709_78551584_78555792_78556891
ES.31151.31	chr7	+	4871	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	6298	2	-136	-2	3prime_fragment	FALSE	canonical	3	660	junction_1	4	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTTGTAATCTGATGGA	NA	False	NA	0	True	NA	NA	NA	78551972	78560955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78552579_78555590_78555792_78556891
ES.31151.32	chr7	+	1574	3	NNC	ENSMUSG00000030609.19	novel	4956	4	NA	NA	-136	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	False	NA	NA	False	AATAAA	-11	NA	78551972	78558122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78552287_78555762_78555792_78556891
ES.31151.34	chr7	+	4412	2	ISM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	9771	0	3119	0	3prime_fragment	FALSE	canonical	3	668	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAATCTGATGGAAT	NA	False	NA	2	True	NA	NA	NA	78555445	78560957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78555792_78556891
ES.31151.4	chr7	+	4961	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	2	-7	2	7	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGATGGAATTGTTCTT	NA	False	NA	9	True	NA	NA	NA	78545676	78560964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ES.31151.5	chr7	+	1391	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	5	3560	-2	284	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAGGTGGAAAGCCACT	NA	False	NA	NA	False	NA	NA	NA	78545679	78557397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ES.31151.7	chr7	+	5014	3	NIC	ENSMUSG00000030609.19	novel	2007	4	NA	NA	3	1	intron_retention	FALSE	canonical	3	314	junction_1	177	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAACTGGTCCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	78545684	78558127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78545763_78552091_78555792_78556891
ES.31151.8	chr7	+	3217	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	12	2827	5	1	intron_retention	FALSE	canonical	3	272	junction_1	194	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAACTGGTCCTTTCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	78545686	78558130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78545763_78551977_78552579_78555590
ES.31151.9	chr7	+	5448	4	NNC	ENSMUSG00000030609.19	novel	2007	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	313.029640059141	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545693	78558129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78548709_78551584_78552579_78555590_78555792_78556891
ES.31152.1	chr7	+	7610	17	FSM	ENSMUSG00000030607.8	ENSMUST00000032835.7	7355	17	-258	3	-258	-3	multi-exon	TRUE	canonical	0	0	junction_1	5.75237722598232	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTCTTTTCTTTTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	78702972	78764844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78703357_78731935_78732013_78734214_78734599_78736009_78736185_78737925_78738054_78739350_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.10	chr7	+	5990	13	NIC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	-10031	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	4.46203117674252	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGTTTCCTGACTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	78739467	78764375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.11	chr7	+	3301	7	NNC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	6623	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.15891053163818	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTCTTTTCTTTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	78756121	78764842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78756283_78756662_78758338_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.2	chr7	+	5590	7	ISM	ENSMUSG00000030607.8	ENSMUST00000032835.7	7355	17	35893	13497	-10375	-13025	internal_fragment	FALSE	canonical	2	5	junction_1	1.82574185835055	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGCTAATTTATGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	78739123	78751350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499
ES.31152.3	chr7	+	6677	12	ISM	ENSMUSG00000030607.8	ENSMUST00000032835.7	7355	17	35902	6	-10366	-6	3prime_fragment	FALSE	canonical	2	2	junction_7	4.66745369199761	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTATTTCTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	78739132	78764841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.4	chr7	+	6373	12	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10355	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	4.49977042573258	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTCTTTTCTTTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	78739143	78764842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.5	chr7	+	6019	13	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10355	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.27849921766448	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTTCCTGACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	78739143	78764374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.6	chr7	+	6784	13	NIC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	-10354	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	4.46203117674252	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTCTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	78739144	78764846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.7	chr7	+	5793	13	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10350	-222	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.27849921766448	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACATTGTGTGTGCCCCA	NA	False	NA	NA	False	ATTAAA	-14	NA	78739148	78764153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.8	chr7	+	6478	13	NNC	ENSMUSG00000030607.8	novel	2596	7	NA	NA	-10345	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.27849921766448	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTCTTTTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	78739153	78764843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78739351_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31152.9	chr7	+	5958	12	ISM	ENSMUSG00000030607.8	ENSMUST00000032835.7	7355	17	36149	478	-10119	-6	3prime_fragment	FALSE	canonical	2	2	junction_7	4.66745369199761	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTGTTGTTTCCTG	NA	False	NA	NA	False	AATAAA	-9	NA	78739379	78764369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
ES.31153.3	chr7	-	3471	6	NIC	ENSMUSG00000030606.9	novel	3358	5	NA	NA	-57	-38	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.81575680566778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	2218	False	NA	NA	False	AATAGA	-6	NA	78780823	78764887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_78767242_78767596_78767900_78771394_78771764_78772146_78772241_78773117_78773300_78780654
ES.31153.4	chr7	-	2802	3	NNC	ENSMUSG00000030606.9	novel	3358	5	NA	NA	6970	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAATAAAAAAA	NA	False	NA	NA	False	AATAGA	-6	NA	78771457	78764887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78767242_78767596_78767900_78771312
ES.31153.5	chr7	-	1541	5	FSM	ENSMUSG00000030606.9	ENSMUST00000206092.2	3358	5	-104	1921	-104	-3	multi-exon	FALSE	canonical	2	5	junction_4	1.87082869338697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCTTAATTCTCCTGG	2171	False	NA	NA	False	NA	NA	NA	78780870	78766770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78767242_78767596_78767900_78771394_78771764_78773117_78773300_78780654
ES.31154.1	chr7	+	4097	1	Antisense	novelGene_ENSMUSG00000030605.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGTCCCACTACCAT	8132	False	NA	NA	False	NA	NA	NA	78791487	78795584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_78791500_78795600
ES.31155.1	chr7	-	4531	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	5	-2528	5	2528	multi-exon	TRUE	canonical	3	790	junction_6	144.155948541848	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCTTTTGACTCCTCC	NA	False	NA	NA	False	TATAAA	-13	NA	78798796	78780987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ES.31155.12	chr7	-	2120	10	NNC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	499.195352542469	598	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798785	78783517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78791707_78791838_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ES.31155.13	chr7	-	2283	10	NNC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	449.470085795141	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTGTGCCTCCTCAT	NA	False	NA	-7	True	AATACA	-17	NA	78798796	78783517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793308_78794994_78795127_78795369_78795493_78798642
ES.31155.15	chr7	-	2840	3	ISM	ENSMUSG00000030605.16	ENSMUST00000206338.2	2330	6	-1414	7667	-1414	443	5prime_fragment	FALSE	canonical	3	1189	junction_1	12	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGGGGGATTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	78794948	78791182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_78791538_78792149_78792303_78792616
ES.31155.2	chr7	-	2035	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	-26	-1	-19	1	multi-exon	FALSE	canonical	3	790	junction_6	144.155948541848	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGCCTCCTCATTGC	NA	False	NA	-4	True	AATACA	-20	NA	78798827	78783514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ES.31155.3	chr7	-	2162	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	-37	0	-37	0	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78798845	78783516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
ES.31155.4	chr7	-	1697	9	NNC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	-1594	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.123231276606	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78795128	78783516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78783896_78784036_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994
ES.31155.5	chr7	-	2183	10	NNC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	-59855	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	481.072875052326	599	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78858663	78783516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78858439
ES.31155.6	chr7	-	1044	3	NNC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	264	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	591	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78786510	78783516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78784305_78784399_78784550_78786404
ES.31155.7	chr7	-	9926	5	NIC	ENSMUSG00000030605.16	novel	2125	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	1154	junction_3	46.7085377634539	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78798795	78783516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_78784295_78784399_78784550_78786404_78795127_78795369_78795493_78798642
ES.31156.1	chr7	+	177	1	Intergenic	novelGene_25598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACACATT	NA	False	NA	NA	False	NA	NA	NA	78863363	78863540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78863400_78863500
ES.31157.1	chr7	+	215	1	Intergenic	novelGene_25599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTGCTAGTTGATGCC	2447	False	NA	NA	False	NA	NA	NA	78898459	78898674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_78898500_78898700
ES.31158.1	chr7	-	1263	1	Genic_Genomic	ENSMUSG00000108387.2	novel	NA	NA	NA	NA	98	13	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGCTCTCTCTTGACAA	NA	False	NA	NA	False	AATAAA	-32	NA	78922685	78921422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_78921400_78922700
ES.31158.2	chr7	-	1142	2	NNC	ENSMUSG00000108387.2	novel	239	2	NA	NA	101	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTCCTCTGTAATCTG	NA	False	NA	NA	False	AATAAA	-18	NA	78922682	78921436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78922092_78922195
ES.31158.3	chr7	-	977	3	NNC	ENSMUSG00000108387.2	novel	239	2	NA	NA	-103	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTATTCCTCTG	NA	False	NA	NA	False	AATAAA	-11	NA	78922662	78921443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_78922092_78922195_78922308_78922445
ES.31159.1	chr7	+	2782	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	11	4084	11	-4084	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGCCTCTGCATGTTG	2733	False	NA	NA	False	NA	NA	NA	78922957	79011172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.10	chr7	+	6659	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	67	151	12	-151	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCGTCCTTGATTGTT	2789	False	NA	NA	False	ACTAAA	-1	NA	78923013	79015105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.11	chr7	+	2065	12	NNC	ENSMUSG00000039202.13	novel	6877	11	NA	NA	33	-4829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.9747297362411	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCGAGTTTTCCTTCT	2810	False	NA	NA	False	NA	NA	NA	78923034	79010427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78923088_78929258_78929364_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.2	chr7	+	6865	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	13	-1	13	1	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTATGTGCTCTGTGG	2735	False	NA	23	True	ATTAAA	-18	NA	78922959	79015257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.3	chr7	+	4627	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	23	2227	23	-2227	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCTCTGGCCTCTCTT	2745	False	NA	NA	False	NA	NA	NA	78922969	79013029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.4	chr7	+	1799	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	28	5050	-27	-5050	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGTCTGAACTATAGTT	2750	False	NA	NA	False	NA	NA	NA	78922974	79010206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.5	chr7	+	5819	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	47	1011	-8	-1011	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTAATTGGTAGATTA	2769	False	NA	NA	False	AATAAA	-13	NA	78922993	79014245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.6	chr7	+	2921	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	48	3908	-7	-3908	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCGCCTGGGTTATTGT	2770	False	NA	NA	False	NA	NA	NA	78922994	79011348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ES.31159.7	chr7	+	1965	9	ISM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	57	8858	2	-8858	5prime_fragment	FALSE	canonical	3	33	junction_5	6.26498204307083	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTTTGTTGTTGGTTT	2779	False	NA	NA	False	AGTAAA	-13	NA	78923003	79006398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549
ES.31159.8	chr7	+	3664	6	NNC	ENSMUSG00000039202.13	novel	6877	11	NA	NA	2	-15304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.3368481479233	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGCGGTTCACTTCTC	2779	False	NA	NA	False	ATTAAA	-20	NA	78923003	78979815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78976879
ES.31159.9	chr7	+	6749	12	NNC	ENSMUSG00000039202.13	novel	6877	11	NA	NA	4	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	13.9111703733735	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAGACAAAAAA	2781	False	NA	-5	True	NA	NA	NA	78923005	79015229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707_79010216_79010257
ES.3116.1	chr10	-	5614	18	NNC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	1	5683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.8996597655385	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTGTTTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	75479824	75466856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75468863_75469545_75469655_75470493_75470728_75472424_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.10	chr10	-	2942	12	NIC	ENSMUSG00000006342.16	novel	2275	13	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	3	junction_11	21.7248001636093	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGGTTCCCGTCTGT	NA	False	NA	-5	True	NA	NA	NA	75479850	75472543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
ES.3116.11	chr10	-	2873	14	NIC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	20.7535553381004	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTTCCTGGTTCCCGT	NA	False	NA	-9	True	NA	NA	NA	75479804	75472547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.12	chr10	-	4267	11	NIC	ENSMUSG00000006342.16	novel	3433	13	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	52	junction_4	12.4422666745252	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATCTTTCCTGGTTCCC	NA	False	NA	-11	True	NA	NA	NA	75479829	75472549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75475335_75475428_75475573_75475667_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.13	chr10	-	2998	14	NIC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	0	-215	intron_retention	FALSE	canonical	3	52	junction_5	9.02462115449998	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGATTCCTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	75479814	75472756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.14	chr10	-	2916	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	9	226	-2	-224	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTAAACTGCCTTGATT	NA	False	NA	NA	False	GATAAA	-37	NA	75479816	75472765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.15	chr10	-	4222	10	NIC	ENSMUSG00000006342.16	novel	3433	13	NA	NA	0	-224	intron_retention	FALSE	canonical	3	52	junction_4	13.1073440916077	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTAAACTGCCTTGATT	NA	False	NA	NA	False	GATAAA	-37	NA	75479814	75472765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75475335_75475428_75475573_75475667_75476492_75476608_75476784_75477266_75477435_75477958_75478505_75479707
ES.3116.16	chr10	-	2763	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-19	407	-2	98	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTGTCTATTGGTT	NA	False	NA	NA	False	NA	NA	NA	75479844	75472946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.2	chr10	-	4130	12	NIC	ENSMUSG00000006342.16	novel	3348	14	NA	NA	-3	85	intron_retention	FALSE	canonical	3	52	junction_6	12.1600891688771	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTCCTCTGCTCCTGC	NA	False	NA	0	True	NA	NA	NA	75479828	75472454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476492_75476608_75476784_75477266_75478505_75479707
ES.3116.3	chr10	-	3279	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	-43	-85	-26	85	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTCCTCTGCTCCTGC	NA	False	NA	0	True	NA	NA	NA	75479868	75472454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.4	chr10	-	2022	9	NNC	ENSMUSG00000006342.16	novel	2275	13	NA	NA	5	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.7290570173102	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCCTGCTTCCTCTG	NA	False	NA	-7	True	NA	NA	NA	75479809	75472461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75473179_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
ES.3116.5	chr10	-	2891	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	-34	-582	-6	77	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTGCCTGCTTCCTCT	NA	False	NA	-8	True	NA	NA	NA	75479848	75472462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
ES.3116.6	chr10	-	3230	15	NNC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	4	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.2641988517198	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTGCCTGCTTCCTC	NA	False	NA	-9	True	NA	NA	NA	75479810	75472463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476127_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.3116.7	chr10	-	2977	14	NIC	ENSMUSG00000006342.16	novel	3151	15	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	20.7851790619916	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTCCCGTCTGTTTG	NA	False	NA	-2	True	NA	NA	NA	75479860	75472540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75479707
ES.3116.8	chr10	-	2579	12	NIC	ENSMUSG00000006342.16	novel	2275	13	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	27.5023665397954	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTCCCGTCTGTTTG	NA	False	NA	-2	True	NA	NA	NA	75479863	75472540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
ES.3116.9	chr10	-	3369	14	FSM	ENSMUSG00000006342.16	ENSMUST00000218896.2	3348	14	-21	0	-21	0	multi-exon	FALSE	canonical	3	52	junction_6	11.6059564384876	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTCCCGTCTGTTTG	NA	False	NA	-2	True	NA	NA	NA	75479863	75472540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ES.31160.1	chr7	+	238	1	Intergenic	novelGene_25603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	79017780	79018018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79017800_79018000
ES.31161.1	chr7	+	4711	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	-44	-22	-40	22	multi-exon	TRUE	canonical	3	260	junction_14	37.7798783892034	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCGTACATGGAACATT	NA	False	NA	34	True	AATAAA	-35	NA	79042015	79100034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.11	chr7	+	4569	37	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_25	69.5171341788803	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042058	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.12	chr7	+	5265	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	-1	-619	-1	619	multi-exon	FALSE	canonical	3	260	junction_14	37.7798783892034	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAGAAATAAATATGTAC	NA	False	NA	NA	False	NA	NA	NA	79042058	79100631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.14	chr7	+	4631	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	69.5601541651534	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042060	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081951_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.15	chr7	+	4632	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	69.5874517457529	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042062	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083190_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.16	chr7	+	4633	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5876406916798	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTAGTTTTGAAAATGG	NA	False	NA	14	True	AATAAA	-15	NA	79042067	79100014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042134_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.17	chr7	+	4658	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.4170656198426	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042067	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067562_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.18	chr7	+	4872	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_26	88.2282053326271	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042068	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79088680_79088760_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.19	chr7	+	4226	35	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	71.6775326383457	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79042068	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.20	chr7	+	5483	39	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	104.039492821149	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTGTAGTTTTGAAAA	NA	False	NA	11	True	AATAAA	-12	NA	79042068	79100011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082171_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79088670_79088760_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.21	chr7	+	4633	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	89.8089685946188	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042068	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095482_79097997_79098061_79098574_79098664_79098820_79098929_79099387
ES.31161.22	chr7	+	4664	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.4705007524714	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79042068	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051545_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.23	chr7	+	4055	26	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	9	-3931	combination_of_known_splicesites	FALSE	canonical	2	7	junction_25	75.2975537451251	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTCATCTGTTGTTCGC	NA	False	NA	NA	False	AATAGA	-14	NA	79042068	79091543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79090378
ES.31161.25	chr7	+	4507	36	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	71.1388753905819	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTAGTTTTGAA	NA	False	NA	9	True	AATAAA	-10	NA	79042071	79100009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79098567_79098664_79098820_79098929_79099387
ES.31161.26	chr7	+	4543	37	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	68.4367047842632	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042073	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.27	chr7	+	4007	37	ISM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	14	1083	14	-1083	5prime_fragment	FALSE	canonical	3	260	junction_14	36.6024268911364	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCCTACTTCTGCTAT	NA	False	NA	NA	False	NA	NA	NA	79042073	79098929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820
ES.31161.28	chr7	+	4449	37	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	70.0163285629295	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042074	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.3	chr7	+	4378	36	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	69.2693883563678	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042057	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.30	chr7	+	4587	37	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	70.3493212914868	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042075	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.31	chr7	+	4238	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	16	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.4438984422504	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGATGCCTCCAGAATTG	NA	False	NA	NA	False	NA	NA	NA	79042075	79099806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79083967_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.32	chr7	+	3961	34	ISM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	16	4311	16	227	5prime_fragment	FALSE	canonical	3	260	junction_14	36.7586374724879	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGAAGTGGTGGTACA	NA	False	NA	NA	False	AATAAA	-24	NA	79042075	79095701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417
ES.31161.33	chr7	+	4642	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	87.0516668157371	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTAGTTTTGAAAATGG	NA	False	NA	14	True	AATAAA	-15	NA	79042075	79100014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094594_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098957_79099387
ES.31161.35	chr7	+	5596	37	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	16	0	intron_retention	FALSE	canonical	3	260	junction_14	38.1324446283389	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042075	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.36	chr7	+	4618	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	89.688756519527	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79042075	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79091624_79091730_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.4	chr7	+	4876	36	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	-1	intron_retention	FALSE	canonical	3	260	junction_14	38.3102266945493	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTGTAGTTTTGAAAA	NA	False	NA	11	True	AATAAA	-12	NA	79042057	79100011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.40	chr7	+	4754	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	18	0	intron_retention	FALSE	canonical	2	3	junction_34	69.6612781453191	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042077	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095448_79097997_79098061_79098567_79098929_79099387
ES.31161.42	chr7	+	4442	36	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.0894862043858	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTGTAGTTTTGAAAA	NA	False	NA	11	True	AATAAA	-12	NA	79042081	79100011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075858_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.44	chr7	+	4693	36	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_23	90.4412584194282	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTGTAGTTTTGAAA	NA	False	NA	10	True	AATAAA	-11	NA	79042087	79100010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084946_79085125_79087981_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.45	chr7	+	766	8	ISM	ENSMUSG00000039187.17	ENSMUST00000118959.8	1301	10	33	3265	-12	-3265	5prime_fragment	FALSE	canonical	3	333	junction_6	15.8899274988392	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTGTGGCTTAAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	79042088	79056065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914
ES.31161.46	chr7	+	4481	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	103.940554591982	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042091	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79052016_79052176_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.47	chr7	+	4760	27	ISM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	33	7817	-8	-3279	5prime_fragment	FALSE	canonical	3	260	junction_14	33.4761462367445	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTCCCTCTCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	79042092	79092195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378
ES.31161.48	chr7	+	4657	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5876406916798	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTGTAGTTTTGAAAA	NA	False	NA	11	True	AATAAA	-12	NA	79042092	79100011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042186_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.49	chr7	+	5741	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_25	88.8688171782806	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042095	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79085125_79087981_79088149_79088680_79088760_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.50	chr7	+	4595	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.4170656198426	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042095	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062490_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.51	chr7	+	4713	36	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	1	8	intron_retention	FALSE	non_canonical	0	0	junction_3	90.8325932691564	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTGAAAATGGGTCAGC	NA	False	NA	20	True	AATAAA	-21	NA	79042101	79100020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051550_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.52	chr7	+	4596	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_23	67.7415058462463	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042102	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084950_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.53	chr7	+	4610	36	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	0	intron_retention	FALSE	canonical	2	7	junction_24	70.4963510417673	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042102	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.54	chr7	+	4823	26	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	-3279	intron_retention	FALSE	canonical	3	260	junction_14	34.138541269363	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTCCCTCTCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	79042102	79092195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378
ES.31161.57	chr7	+	680	3	NNC	ENSMUSG00000039187.17	novel	1301	10	NA	NA	16	-2243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAATAATGTATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	79042116	79049391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042186_79045640_79045744_79048883
ES.31161.58	chr7	+	5325	35	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	17	8	intron_retention	FALSE	canonical	0	0	junction_13	90.0172273016263	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTGAAAATGGGTCAGC	NA	False	NA	20	True	AATAAA	-21	NA	79042117	79100020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083193_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.59	chr7	+	4606	38	NNC	ENSMUSG00000039187.17	novel	2864	22	NA	NA	1071	-20	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	86.6549373044625	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATAAAACTTTAAACATT	NA	False	NA	-8	True	NA	NA	NA	79043171	79099992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79043236_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.61	chr7	+	4589	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3245	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	70.3745874711063	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79045638	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067562_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.62	chr7	+	4549	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3245	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	68.8596880315506	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79045638	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070081_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.63	chr7	+	4724	36	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3245	0	intron_retention	FALSE	canonical	3	260	junction_13	38.2976100922174	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79045638	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.64	chr7	+	4803	35	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3245	0	intron_retention	FALSE	canonical	3	260	junction_13	38.7229535034155	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79045638	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.65	chr7	+	4539	37	NNC	ENSMUSG00000039187.17	novel	2864	22	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	70.1888765764329	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79048416	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79048494_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.66	chr7	+	4725	37	NNC	ENSMUSG00000039187.17	novel	2864	22	NA	NA	-412	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4647709896036	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTGGTGTAGTTT	NA	False	NA	5	True	AATAAA	-6	NA	79048471	79100005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79048742_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.68	chr7	+	4015	32	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	3375	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.3930250129515	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79052258	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79062359_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.69	chr7	+	3775	31	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-6473	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	115.444094213991	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTGTAGTTTTGAAAA	2716	False	NA	11	True	AATAAA	-12	NA	79056010	79100011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79056039_79057071_79057158_79058887_79059015_79060593_79060646_79060908_79061002_79062366_79062504_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.7	chr7	+	4578	37	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	118.209442187256	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042057	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067769_79070010_79070099_79073953_79074082_79074641_79074713_79075858_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098933_79099387
ES.31161.70	chr7	+	3939	29	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-5401	0	intron_retention	FALSE	canonical	3	260	junction_6	42.4316376958399	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	3788	False	NA	12	True	AATAAA	-13	NA	79057082	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.71	chr7	+	3715	29	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3546	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	100.565543658992	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	5643	False	NA	12	True	AATAAA	-13	NA	79058937	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083204_79083303_79083883_79084049_79084946_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.72	chr7	+	6650	26	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-3507	0	intron_retention	TRUE	non_canonical	0	0	junction_16	80.3905069022456	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	5682	False	NA	12	True	AATAAA	-13	NA	79058976	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79089965_79090000_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.73	chr7	+	3269	25	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	5169	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	83.865374509786	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79067652	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098820_79098929_79099387
ES.31161.74	chr7	+	5594	18	NIC	ENSMUSG00000039187.17	novel	4492	35	NA	NA	13405	0	intron_retention	FALSE	canonical	2	7	junction_7	94.4893395792226	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79075888	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79075970_79076874_79076998_79080177_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.75	chr7	+	2820	21	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-13532	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	90.2102405495075	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79076883	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093952_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.76	chr7	+	3519	10	NNC	ENSMUSG00000039187.17	novel	4492	35	NA	NA	-13512	-2706	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	114.82235339648	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGACCATCAGTTACT	NA	False	NA	NA	False	NA	NA	NA	79076903	79092768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083204_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378
ES.31161.78	chr7	+	1837	13	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	-2435	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	109.988730483324	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	3449	False	NA	12	True	AATAAA	-13	NA	79087980	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79088149_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.79	chr7	+	4605	9	NNC	ENSMUSG00000039187.17	novel	4492	35	NA	NA	-829	0	intron_retention	FALSE	canonical	0	0	junction_1	129.10267231936	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	5055	False	NA	12	True	AATAAA	-13	NA	79089586	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79091730_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.80	chr7	+	2385	10	ISM	ENSMUSG00000039187.17	ENSMUST00000132091.8	4492	35	50712	0	2397	0	3prime_fragment	FALSE	canonical	3	318	junction_8	42.0531703418716	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	8281	False	NA	12	True	AATAAA	-13	NA	79092812	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098929_79099387
ES.31161.81	chr7	+	2503	9	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2875	0	intron_retention	FALSE	canonical	3	318	junction_6	38.7409263570194	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	8759	False	NA	12	True	AATAAA	-13	NA	79093290	79100012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31161.82	chr7	+	4250	2	NIC	ENSMUSG00000039187.17	novel	4492	35	NA	NA	4889	1	intron_retention	FALSE	canonical	3	427	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTAGTTTTGAAAATG	NA	False	NA	13	True	AATAAA	-14	NA	79095304	79100013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79098929_79099387
ES.31161.9	chr7	+	4619	38	NNC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_34	69.1353570142035	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTAGTTTTGAAAATGG	NA	False	NA	14	True	AATAAA	-15	NA	79042057	79100014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095448_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ES.31162.1	chr7	+	2323	1	Antisense	novelGene_ENSMUSG00000039176.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCCAATGTAGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	79100697	79103020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_79100700_79103000
ES.31162.2	chr7	+	1890	1	Antisense	novelGene_ENSMUSG00000039176.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCGTGGTGTTACC	NA	False	NA	NA	False	NA	NA	NA	79100785	79102675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_79100800_79102700
ES.31163.1	chr7	+	208	1	Intergenic	novelGene_25608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTACATACTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	79112537	79112745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79112500_79112700
ES.31163.2	chr7	+	175	2	Intergenic	novelGene_25609	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	79112538	79141723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79112697_79141706
ES.31164.1	chr7	-	4663	11	Intergenic	novelGene_25600	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79013029	78940314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_78940467_78944253_78944353_78946752_78946956_78973216_78973391_78975179_78975348_78998005_78998190_79000496_79000590_79003735_79003847_79005547_79005619_79007811_79007896_79009705
ES.31164.10	chr7	-	3080	10	NNC	ENSMUSG00000039194.17	novel	2134	9	NA	NA	-5207	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	7.6658614714046	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTTCATGATGAACT	NA	False	NA	-16	True	AATAAA	-21	NA	79042003	79024618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033793_79034406_79034528_79036436_79037545_79041894
ES.31164.11	chr7	-	2862	11	NNC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-1934	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.84364178379021	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTTCATGATGAACT	NA	False	NA	-16	True	AATAAA	-21	NA	79038730	79024618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025711_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436_79036808_79037447_79037545_79038072
ES.31164.12	chr7	-	1835	10	NNC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.15302014516399	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTTCATGATGAACT	NA	False	NA	-16	True	AATAAA	-21	NA	79036462	79024618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025711_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036217_79036291_79036436
ES.31164.13	chr7	-	1967	8	NIC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.43406390357582	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACTCTTTCATGATGAA	NA	False	NA	-18	True	AATAAA	-19	NA	79036735	79024620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79025467_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
ES.31164.14	chr7	-	208	1	Intergenic	novelGene_25604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGGATAGAACCCAAG	NA	False	NA	NA	False	NA	NA	NA	79039717	79039509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79039500_79039700
ES.31164.15	chr7	-	704	4	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	5.71547606649408	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTGTCCTGTTTAAT	NA	False	NA	NA	False	TATAAA	-45	NA	79048027	79046094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79046493_79047177_79047262_79047383_79047471_79047892
ES.31164.16	chr7	-	821	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTTGTCCTGTTTAAT	NA	False	NA	NA	False	TATAAA	-45	NA	79048198	79046094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79046493_79047383_79047501_79047892
ES.31164.17	chr7	-	1079	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAATGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79048265	79046193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79046493_79047383_79047501_79047602
ES.31164.18	chr7	-	721	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	2	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAATGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79048227	79046193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79046493_79047383_79047471_79047892
ES.31164.19	chr7	-	244	1	Intergenic	novelGene_25605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAAATAATGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	79053375	79053131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79053100_79053400
ES.31164.2	chr7	-	3354	1	Intergenic	novelGene_25601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGGGTTGTCAAAATG	NA	False	NA	NA	False	NA	NA	NA	78961098	78957744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_78957700_78961100
ES.31164.20	chr7	-	5616	2	Genic_Genomic	ENSMUSG00000082400.2	novel	208	1	NA	NA	-2719	2932	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCATATCAAGGCTGGAC	NA	False	NA	NA	False	NA	NA	NA	79064984	79059125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_79059323_79059565
ES.31164.21	chr7	-	205	1	Intergenic	novelGene_25606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79059562	79059357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79059400_79059600
ES.31164.22	chr7	-	754	1	Intergenic	novelGene_25607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79066231	79065477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79065500_79066200
ES.31164.23	chr7	-	3013	6	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAGAAAGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79095442	79091775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79093540_79093694_79093824_79093905_79093975_79094146_79094252_79094416_79095336_79095415
ES.31164.24	chr7	-	3666	1	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79095443	79091777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79091800_79095400
ES.31164.25	chr7	-	3303	3	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79095443	79091803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79093975_79094146_79094252_79094416
ES.31164.26	chr7	-	2312	7	Antisense	novelGene_ENSMUSG00000039187.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79095443	79091803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79093540_79093694_79093824_79093905_79093975_79094146_79094252_79094416_79094611_79095284_79095336_79095415
ES.31164.3	chr7	-	4203	25	Intergenic	novelGene_25602	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGCAACATGTAAATTTA	NA	False	NA	NA	False	NA	NA	NA	79095443	78985388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_78985399_79006469_79006554_79060215_79061007_79062369_79062501_79067580_79067758_79070002_79070102_79073955_79074079_79074638_79074711_79075852_79075967_79076871_79076998_79080177_79080243_79081857_79081961_79082928_79083105_79083175_79083299_79083879_79084047_79084942_79085124_79087980_79088148_79089364_79089440_79090374_79090494_79093486_79093540_79093694_79093824_79093905_79093971_79094146_79094258_79094421_79095336_79095415
ES.31164.4	chr7	-	3424	1	Antisense	novelGene_ENSMUSG00000039202.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCTGGAAGCAGAATCT	NA	False	NA	NA	False	NA	NA	NA	79018265	79014841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79014800_79018300
ES.31164.5	chr7	-	2316	10	NNC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-1034	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	8.18459860475684	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTAGGTCTTATTTAG	NA	False	NA	-2	True	AATAAA	-35	NA	79037830	79024604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025711_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436_79036620_79037447
ES.31164.6	chr7	-	2399	11	NNC	ENSMUSG00000039194.17	novel	2142	9	NA	NA	-1034	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	8.44985206971104	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGATGAACTTAGGTC	NA	False	NA	-10	True	AATAAA	-27	NA	79037830	79024612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025711_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436_79036808_79037447_79037545_79037641
ES.31164.7	chr7	-	2591	11	NNC	ENSMUSG00000039194.17	novel	2134	9	NA	NA	-995	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.43860177991591	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGATGAACTTAGGTC	NA	False	NA	-10	True	AATAAA	-27	NA	79037791	79024612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033793_79034406_79034528_79036436_79036535_79037070_79037545_79037641
ES.31164.8	chr7	-	3165	10	NNC	ENSMUSG00000039194.17	novel	2134	9	NA	NA	-1037	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	7.48001452431415	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTTCATGATGAACTTA	NA	False	NA	-14	True	AATAAA	-23	NA	79037833	79024616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033793_79034406_79034528_79036436_79037545_79037641
ES.31164.9	chr7	-	2284	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	-143	1	-143	0	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTTCATGATGAACT	NA	False	NA	-16	True	AATAAA	-21	NA	79036939	79024618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
ES.31165.1	chr7	-	7688	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	149	0	-15	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGATCATGGTG	NA	False	NA	2	True	NA	NA	NA	79115961	79095978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.100	chr7	-	4699	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	76.294882468676	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115786	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115287
ES.31165.102	chr7	-	5328	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	-14	intron_retention	FALSE	canonical	3	236	junction_15	44.3424112234165	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79115944	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79111642_79114351_79115120_79115817
ES.31165.103	chr7	-	4494	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	88	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	76.294882468676	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79115730	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115420
ES.31165.104	chr7	-	4092	21	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	1325	-14	intron_retention	FALSE	canonical	1	1	junction_10	98.6863212405853	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79114493	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.105	chr7	-	4561	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-25	-14	intron_retention	FALSE	canonical	3	8	junction_19	77.2304991567451	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79115971	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.107	chr7	-	4690	22	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-13	-14	intron_retention	FALSE	canonical	1	1	junction_15	95.9109091518325	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79115959	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109355_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.108	chr7	-	5388	18	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	1011	-14	intron_retention	FALSE	canonical	2	5	junction_13	83.7935343650337	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAACACCAAAC	NA	False	NA	-29	True	NA	NA	NA	79114807	79099338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79111642_79114351
ES.31165.109	chr7	-	4150	22	ISM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	130	4004	-34	-69	5prime_fragment	FALSE	canonical	3	224	junction_19	37.4555216192919	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATTCTTATGTGGAAAA	NA	False	NA	NA	False	TTTAAA	-21	NA	79115980	79099982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.11	chr7	-	4988	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	471	intron_retention	FALSE	non_canonical	0	0	junction_12	76.2994318837639	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAGACAGTTGGATAA	NA	False	NA	-7	True	AATAAA	-19	NA	79115937	79098657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106257_79106448_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.111	chr7	-	2752	6	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-3	485	intron_retention	FALSE	canonical	3	266	junction_4	37.621270579288	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTTGAATTGTATTT	NA	False	NA	NA	False	NA	NA	NA	79105816	79100849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788
ES.31165.112	chr7	-	3948	21	ISM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	163	5069	-1	287	5prime_fragment	FALSE	canonical	3	224	junction_18	37.8218190995621	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTAGTGTCTTTGT	NA	False	NA	NA	False	AATACA	-13	NA	79115947	79101047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.113	chr7	-	3872	18	ISM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	-24	3668	-13	896	5prime_fragment	FALSE	canonical	3	224	junction_15	31.0859952445795	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTTGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	79115959	79102797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.114	chr7	-	3420	18	ISM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	-30	4126	-19	438	5prime_fragment	FALSE	canonical	3	224	junction_15	31.0859952445795	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATCAGTGGTTA	NA	False	NA	NA	False	NA	NA	NA	79115965	79103255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.115	chr7	-	1713	2	ISM	ENSMUSG00000039176.18	ENSMUST00000132048.5	4546	24	-44	14311	-44	28	intron_retention	FALSE	canonical	0	0	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTCTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	79115990	79113635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79113710_79114351
ES.31165.116	chr7	-	2346	1	FSM	ENSMUSG00000039176.18	ENSMUST00000201557.2	2279	1	-39	-28	-35	28	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTCTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	79115981	79113635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79113600_79116000
ES.31165.117	chr7	-	1595	2	ISM	ENSMUSG00000039176.18	ENSMUST00000149444.8	4247	23	-31	14356	-13	-3	5prime_fragment	FALSE	canonical	3	276	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-37	NA	79115959	79113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79115120_79115817
ES.31165.12	chr7	-	4955	21	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-32	471	intron_retention	FALSE	canonical	2	5	junction_14	78.4341124766514	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAGACAGTTGGATAA	NA	False	NA	-7	True	AATAAA	-19	NA	79115978	79098657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.13	chr7	-	4829	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-31	471	intron_retention	FALSE	canonical	3	8	junction_20	75.5646319745036	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAGACAGTTGGATAA	NA	False	NA	-7	True	AATAAA	-19	NA	79115977	79098657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.14	chr7	-	5064	23	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	-31	470	intron_retention	FALSE	canonical	1	1	junction_11	76.0811332918694	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAGACAGTTGGATA	NA	False	NA	-8	True	AATAAA	-18	NA	79115977	79098658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.15	chr7	-	7230	21	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	1839	470	intron_retention	FALSE	non_canonical	0	0	junction_20	78.8435793200689	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAGACAGTTGGATA	NA	False	NA	-8	True	AATAAA	-18	NA	79113979	79098658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79112530_79112750
ES.31165.16	chr7	-	4978	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-34	470	intron_retention	FALSE	canonical	0	0	junction_19	75.9208074790071	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTAGACAGTTGGATA	NA	False	NA	-8	True	AATAAA	-18	NA	79115980	79098658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110109_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.17	chr7	-	5113	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	1689	469	intron_retention	FALSE	canonical	1	5	junction_20	78.7958596628021	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTAGACAGTTGGAT	NA	False	NA	-9	True	AATAAA	-17	NA	79114129	79098659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79113530
ES.31165.2	chr7	-	8095	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	224	junction_19	46.7838179671429	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGATCATGGTG	NA	False	NA	2	True	NA	NA	NA	79115949	79095978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.20	chr7	-	4527	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_22	76.294882468676	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACTGATATTATTT	NA	False	NA	-6	True	TATAAA	-20	NA	79115971	79099128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115838
ES.31165.21	chr7	-	4633	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	54	3150	54	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACTGATATTATTT	NA	False	NA	-6	True	TATAAA	-20	NA	79116056	79099128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.22	chr7	-	4340	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-13	0	intron_retention	FALSE	canonical	3	8	junction_20	75.5646319745036	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACTGATATTATTT	NA	False	NA	-6	True	TATAAA	-20	NA	79115959	79099128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.24	chr7	-	4621	24	NNC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	106.622383687543	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115927	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101796_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79104843_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.25	chr7	-	4644	22	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_10	77.8294839468217	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115950	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.26	chr7	-	4525	22	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	12	junction_14	75.357560368963	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115947	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.27	chr7	-	5045	21	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-26	0	intron_retention	FALSE	canonical	3	224	junction_18	47.6534101612886	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115972	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.28	chr7	-	4447	23	FSM	ENSMUSG00000039176.18	ENSMUST00000149444.8	4247	23	-19	-181	-1	0	multi-exon	FALSE	canonical	3	12	junction_15	73.682701469665	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115947	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.29	chr7	-	4595	22	FSM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	-6	0	1	0	multi-exon	FALSE	canonical	3	224	junction_19	46.6152778280268	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115941	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.30	chr7	-	6003	21	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-1	0	intron_retention	FALSE	canonical	2	12	junction_8	96.8113629694366	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115947	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.31	chr7	-	4914	21	NNC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-24	0	intron_retention	FALSE	canonical	2	5	junction_14	98.0456526318225	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115970	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.32	chr7	-	5226	21	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-56	0	intron_retention	FALSE	canonical	3	224	junction_18	47.748795796334	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79116002	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.33	chr7	-	4577	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-34	0	intron_retention	FALSE	canonical	1	1	junction_16	76.1008058080077	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115980	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109355_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.34	chr7	-	4939	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	0	intron_retention	FALSE	canonical	3	224	junction_19	46.7838179671429	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115944	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.35	chr7	-	4818	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_22	76.294882468676	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115817	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115392
ES.31165.36	chr7	-	4674	23	NNC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	3	junction_11	108.67545892197	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115947	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79104843_79105182_79105344_79105788_79105871_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.37	chr7	-	4386	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-35	0	intron_retention	FALSE	canonical	1	2	junction_15	77.1131630092882	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115981	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109458_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.38	chr7	-	4020	23	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	70.0082787312264	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115947	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099283_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.39	chr7	-	4563	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_6	75.4469875732908	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115977	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103776_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.4	chr7	-	5502	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	151	2184	-13	966	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACTCGCCAATTCTTAG	NA	False	NA	NA	False	AATATA	-18	NA	79115959	79098162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.40	chr7	-	4476	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_1	71.0537147902031	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79116061	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.41	chr7	-	3998	19	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_5	82.0372544098784	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115977	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.42	chr7	-	7766	17	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	224	junction_15	49.729895435241	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115944	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79108159_79108921_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.43	chr7	-	4425	22	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_4	77.3276739660371	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115972	79099129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.44	chr7	-	4745	24	NNC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	79	-1	intron_retention	FALSE	canonical	1	1	junction_12	106.527329045876	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79116031	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79104843_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.45	chr7	-	4308	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-36	-1	intron_retention	FALSE	canonical	0	0	junction_11	100.098389097927	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79115982	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106455_79106577_79107921_79108159_79108921_79109049_79109458_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.46	chr7	-	3699	20	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	-68	-1	intron_retention	FALSE	canonical	1	1	junction_10	102.96727823834	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79111620	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109458_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445
ES.31165.47	chr7	-	7443	17	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	12	junction_10	76.1802703706806	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79115969	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.48	chr7	-	1929	9	NNC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-110	-1	intron_retention	FALSE	canonical	0	0	junction_5	118.227468783697	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79105923	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103519_79104341_79104460_79104558_79104613_79105182_79105344_79105788
ES.31165.5	chr7	-	5090	22	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-2	962	intron_retention	FALSE	canonical	0	0	junction_6	95.1086262841116	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGCACTCGCCAATTC	NA	False	NA	NA	False	AATATA	-14	NA	79115944	79098166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103519_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.50	chr7	-	5104	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	224	junction_19	46.8999997582544	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCTACTGATATTAT	NA	False	NA	-8	True	TATAAA	-18	NA	79115959	79099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.52	chr7	-	5758	21	NNC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-23	-2	intron_retention	FALSE	canonical	2	12	junction_8	77.8741773632313	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115969	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.53	chr7	-	4563	22	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1	junction_10	96.4001251398779	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115947	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.54	chr7	-	4094	24	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	33	junction_1	69.3599416975486	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115934	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099283_79099696_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.55	chr7	-	4448	22	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-23	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	77.8644382776844	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115969	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105357_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.56	chr7	-	5715	21	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	12	junction_14	77.2556794028763	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115949	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.57	chr7	-	4578	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-31	-2	intron_retention	FALSE	canonical	0	0	junction_7	76.0518526896003	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115977	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103950_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.58	chr7	-	4941	21	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	0	-2	intron_retention	FALSE	canonical	3	12	junction_13	77.0057627713667	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTCTACTGATATTA	NA	False	NA	-9	True	TATAAA	-17	NA	79115946	79099131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.6	chr7	-	5151	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	133	2553	-31	597	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTGAGGTTTTTATG	NA	False	NA	NA	False	AGTAAA	-26	NA	79115977	79098531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.60	chr7	-	4441	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	9	-5	intron_retention	FALSE	canonical	0	0	junction_19	75.9208074790071	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTTGTCTACTGATA	NA	False	NA	-12	True	TATAAA	-14	NA	79115919	79099134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110109_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.61	chr7	-	4980	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-35	-5	intron_retention	FALSE	canonical	1	7	junction_2	74.7521524607864	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTTGTCTACTGATA	NA	False	NA	-12	True	TATAAA	-14	NA	79115981	79099134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79100861_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.62	chr7	-	4648	23	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-31	-6	intron_retention	FALSE	canonical	2	7	junction_9	107.660201598662	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTCTTGTCTACTGAT	NA	False	NA	-13	True	TATAAA	-13	NA	79115977	79099135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79104843_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.63	chr7	-	4979	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	224	junction_19	37.4555216192919	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTCTTGTCTACTGAT	NA	False	NA	-13	True	TATAAA	-13	NA	79115962	79099135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.64	chr7	-	6205	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	-8	intron_retention	FALSE	canonical	1	1	junction_16	78.7891331339545	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGTCTTGTCTACTG	NA	False	NA	-15	True	TATAAA	-11	NA	79115944	79099137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109458_79109620_79109805_79109886_79110010_79110158_79110263_79111642_79114351
ES.31165.65	chr7	-	4437	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-31	-8	intron_retention	FALSE	canonical	2	3	junction_10	77.3529766279054	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGTCTTGTCTACTG	NA	False	NA	-15	True	TATAAA	-11	NA	79115977	79099137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.66	chr7	-	4458	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	47	3332	47	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTGCTTTCCCGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	79116063	79099310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.67	chr7	-	5225	22	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	0	-2	intron_retention	FALSE	canonical	2	12	junction_8	69.4176292899421	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTGTGCTTTCCCGTC	NA	False	NA	-3	True	AATAAA	-21	NA	79115946	79099312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.68	chr7	-	2393	15	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	167	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.1930096070638	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTGTGCTTTCCCGTC	NA	False	NA	-3	True	AATAAA	-21	NA	79109022	79099312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101957_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921
ES.31165.69	chr7	-	5342	20	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	12	junction_12	78.9925484756723	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTGTGCTTTCCCGT	NA	False	NA	-4	True	AATAAA	-20	NA	79115959	79099313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.7	chr7	-	8631	22	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-15	587	intron_retention	TRUE	non_canonical	0	0	junction_20	76.9609259753554	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTCAGTGGCTTTTGA	NA	False	NA	NA	False	AGTAAA	-16	NA	79115961	79098541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79112530_79112750_79115120_79115817
ES.31165.70	chr7	-	3055	14	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-23	-3	intron_retention	FALSE	canonical	3	236	junction_13	50.834806135097	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTGTGCTTTCCCGT	NA	False	NA	-4	True	AATAAA	-20	NA	79109212	79099313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184
ES.31165.71	chr7	-	4984	21	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	224	junction_18	47.748795796334	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGTTGTGCTTTCCCGT	NA	False	NA	-4	True	AATAAA	-20	NA	79115944	79099313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.74	chr7	-	3314	15	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	92.4886093372738	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGTTGTGCTTTCCCG	NA	False	NA	-5	True	AATAAA	-19	NA	79115946	79099314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.75	chr7	-	4078	22	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	3	8	junction_20	94.8866372199083	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGTTGTGCTTTCCCG	NA	False	NA	-5	True	AATAAA	-19	NA	79115959	79099314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.76	chr7	-	5327	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	224	junction_18	47.9312006943285	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115948	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.77	chr7	-	4417	22	FSM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	-14	186	-3	-5	multi-exon	FALSE	canonical	3	224	junction_19	46.6152778280268	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115949	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.78	chr7	-	4389	23	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	76.0811332918694	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115959	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.79	chr7	-	4911	21	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	12	junction_13	77.2100220178702	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115949	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.8	chr7	-	4282	20	ISM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	4303	-588	-80	587	3prime_fragment	FALSE	canonical	3	224	junction_19	48.2262672532884	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTCAGTGGCTTTTGA	NA	False	NA	NA	False	AGTAAA	-16	NA	79111632	79098541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445
ES.31165.80	chr7	-	4364	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-49	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	76.294882468676	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115995	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115838
ES.31165.81	chr7	-	4904	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	224	junction_19	46.8999997582544	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACAGTTGTGCTTTCCC	NA	False	NA	-6	True	AATAAA	-18	NA	79115944	79099315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.82	chr7	-	4344	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-24	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	75.9208074790071	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAACAGTTGTGCTTTC	NA	False	NA	-8	True	AATAAA	-16	NA	79115970	79099317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110144_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.83	chr7	-	3026	20	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-754	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.6893430578196	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAACAGTTGTGCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	79110298	79099318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103839_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263
ES.31165.84	chr7	-	3694	21	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	1315	6	intron_retention	FALSE	canonical	3	224	junction_19	46.6228216649314	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAACAGTTGTGCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	79114503	79099318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110429_79111445_79111642_79114351
ES.31165.85	chr7	-	4418	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-65	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	76.1008058080077	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79116011	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109355_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.86	chr7	-	4708	23	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	92.6977671417055	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115959	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.87	chr7	-	4368	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-30	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	76.2994318837639	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115976	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106449_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.88	chr7	-	4134	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_20	75.5646319745036	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115944	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.89	chr7	-	5006	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	5	intron_retention	FALSE	canonical	1	1	junction_16	77.8879362433291	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115944	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109458_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351
ES.31165.9	chr7	-	5057	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	108	2672	-56	478	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTTGGATAAGAAATTT	NA	False	NA	0	True	AATAAA	-26	NA	79116002	79098650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.91	chr7	-	4047	21	NNC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	90	5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	112.089919261279	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79111462	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79100861_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79104743_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445
ES.31165.92	chr7	-	4211	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	77.3276739660371	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115948	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.93	chr7	-	5425	20	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	-26	5	intron_retention	FALSE	canonical	3	224	junction_17	48.8774826504936	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115972	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.94	chr7	-	4256	23	FSM	ENSMUSG00000039176.18	ENSMUST00000149444.8	4247	23	-18	9	0	5	multi-exon	FALSE	canonical	3	12	junction_15	73.682701469665	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAACAGTTGTGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	79115946	79099319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.95	chr7	-	4479	24	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	-25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	93.9591271795362	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115971	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115329_79115455_79115817
ES.31165.96	chr7	-	4819	21	NIC	ENSMUSG00000039176.18	novel	4589	22	NA	NA	3	2	intron_retention	FALSE	canonical	3	224	junction_18	47.6534101612886	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115939	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.97	chr7	-	5122	19	NIC	ENSMUSG00000039176.18	novel	4247	23	NA	NA	-2	2	intron_retention	FALSE	canonical	3	8	junction_17	102.06057569459	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115944	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
ES.31165.98	chr7	-	4245	23	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	30	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	94.1841435304371	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115898	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31165.99	chr7	-	5376	20	NIC	ENSMUSG00000039176.18	novel	4546	24	NA	NA	-16	2	intron_retention	FALSE	canonical	1	1	junction_8	100.854410852306	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGGAACAGTTGTG	NA	False	NA	-13	True	AATAAA	-11	NA	79115962	79099322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79104460_79104558_79105344_79105788_79105937_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109260_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ES.31166.1	chr7	-	1711	1	Genic_Genomic	ENSMUSG00000108373.2	novel	NA	NA	NA	NA	-351	35	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCTGGTGGGAGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	79229178	79227467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_79227500_79229200
ES.31167.1	chr7	+	179	1	Intergenic	novelGene_25610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTATGTAACA	693	False	NA	NA	False	NA	NA	NA	79273979	79274158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79274000_79274200
ES.31168.1	chr7	+	127	1	Intergenic	novelGene_25611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAGATTATTATACA	NA	False	NA	3	True	AATAAA	-11	NA	79289898	79290025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79289900_79290000
ES.31169.1	chr7	+	7293	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	-93	-1	-93	1	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATTACTTTCCCAGTTC	1831	False	NA	17	True	ATTAAA	-27	NA	79309850	79347897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.10	chr7	+	7222	22	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	58.3173739101243	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTATTACTTTCC	1950	False	NA	11	True	ATTAAA	-21	NA	79309969	79347891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325211_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.12	chr7	+	7345	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	2	-5	intron_retention	FALSE	canonical	3	202	junction_6	27.8172608284856	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTATTACTTTCC	1952	False	NA	11	True	ATTAAA	-21	NA	79309971	79347891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.13	chr7	+	8989	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	203	junction_12	26.7605586638246	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1952	False	NA	16	True	ATTAAA	-26	NA	79309971	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.14	chr7	+	1632	3	ISM	ENSMUSG00000046591.11	ENSMUST00000206017.2	4635	13	-19	16251	4	6564	5prime_fragment	FALSE	canonical	3	244	junction_2	26	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATTATTAGTAAAG	1954	False	NA	NA	False	NA	NA	NA	79309973	79317985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407
ES.31169.15	chr7	+	6346	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	4	-988	intron_retention	FALSE	canonical	3	202	junction_6	27.8172608284856	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTTCCCATGGTCA	1954	False	NA	-4	True	ATTAAA	-7	NA	79309973	79346894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.16	chr7	+	7648	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	202	junction_6	27.4540980547531	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1954	False	NA	16	True	ATTAAA	-26	NA	79309973	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.17	chr7	+	6491	21	NNC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-4	-979	intron_retention	FALSE	canonical	0	0	junction_1	76.6365448072915	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATGGTCATCTGAAGAT	1955	False	NA	5	True	ATTAAA	-16	NA	79309974	79346903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310751_79313092_79313144_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.18	chr7	+	2664	8	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-20	14268	-4	3952	5prime_fragment	FALSE	canonical	3	202	junction_6	27.6065653238427	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGACTTTGTTGTTGTTG	1955	False	NA	NA	False	ATTAAA	-30	NA	79309974	79329413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762
ES.31169.19	chr7	+	6093	23	NNC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-4	-957	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.3457867344964	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGAATGCCTCATGGT	1955	False	NA	27	True	ATTAAA	-38	NA	79309974	79346925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310046_79310149_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.2	chr7	+	2118	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	-78	11	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAATTTCCATATTT	1846	False	NA	NA	False	AATAAA	-28	NA	79309865	79325472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
ES.31169.22	chr7	+	2565	7	NNC	ENSMUSG00000046591.11	novel	5067	21	NA	NA	0	564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.3389828885552	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATAAAAAATTACAAAT	1959	False	NA	NA	False	NA	NA	NA	79309978	79326025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325250
ES.31169.23	chr7	+	8755	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	202	junction_6	28.2177249260106	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1959	False	NA	16	True	ATTAAA	-26	NA	79309978	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.24	chr7	+	8885	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	202	junction_6	28.2092183514538	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1959	False	NA	16	True	ATTAAA	-26	NA	79309978	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79345571_79345682_79345809_79346401
ES.31169.26	chr7	+	1896	5	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-15	22694	1	-4474	5prime_fragment	FALSE	canonical	3	244	junction_2	20.0624026477389	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGGATTTTTTTCAG	1960	False	NA	NA	False	AATAAA	-14	NA	79309979	79320987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613
ES.31169.27	chr7	+	7387	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	36	-224	1	224	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGTGGGGAAAATCCAG	1960	False	NA	NA	False	NA	NA	NA	79309979	79348120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.28	chr7	+	6554	20	NNC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.4361316003337	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1960	False	NA	16	True	ATTAAA	-26	NA	79309979	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310658_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.29	chr7	+	7275	21	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	202	junction_6	27.1071946169278	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1960	False	NA	16	True	ATTAAA	-26	NA	79309979	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345809_79346401
ES.31169.3	chr7	+	6311	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	-78	966	-78	-952	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGCCTCATGGTCTGAA	1846	False	NA	32	True	ATTAAA	-43	NA	79309865	79346930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.30	chr7	+	2642	6	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-3	17660	-1	560	5prime_fragment	FALSE	canonical	3	244	junction_2	18.3847763108502	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACAAATAAAAAATTAC	1972	False	NA	NA	False	NA	NA	NA	79309991	79326021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019
ES.31169.31	chr7	+	7852	20	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	52	0	1	0	intron_retention	FALSE	canonical	3	202	junction_6	23.8185662818523	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1976	False	NA	16	True	ATTAAA	-26	NA	79309995	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448
ES.31169.32	chr7	+	165	1	Intergenic	novelGene_25612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAACATGAAAAGTAGTA	6735	False	NA	NA	False	NA	NA	NA	79314754	79314919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79314800_79314900
ES.31169.33	chr7	+	2104	1	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-1045	-5118	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATAGCATAATGTTAA	NA	False	NA	NA	False	NA	NA	NA	79318239	79320343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79318200_79320300
ES.31169.34	chr7	+	8139	15	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	5262	0	intron_retention	FALSE	canonical	3	203	junction_7	27.8450523212924	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	2389	False	NA	16	True	ATTAAA	-26	NA	79325930	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79345571_79345682_79345809_79346401
ES.31169.35	chr7	+	5169	15	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	6396	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	67.5409173035434	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCTAAAAATGCTTA	3523	False	NA	2	True	ATTAAA	-12	NA	79327064	79347882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79327194_79328762_79328915_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.37	chr7	+	4170	12	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	21792	640	11067	-626	3prime_fragment	FALSE	canonical	3	203	junction_3	29.2916370317536	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGGCATTTCTGCCT	8194	False	NA	NA	False	AATAAA	-17	NA	79331735	79347256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.38	chr7	+	4814	12	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	21792	-4	11067	4	3prime_fragment	FALSE	canonical	3	203	junction_3	29.2916370317536	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTTTCCCAGTTCTCC	8194	False	NA	20	True	ATTAAA	-30	NA	79331735	79347900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.39	chr7	+	10730	3	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	14775	0	intron_retention	FALSE	canonical	3	220	junction_1	19	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	NA	False	NA	16	True	ATTAAA	-26	NA	79335443	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79339715_79340619_79340752_79341569
ES.31169.4	chr7	+	2167	6	ISM	ENSMUSG00000046591.11	ENSMUST00000206591.2	3655	20	-82	18214	-31	6	5prime_fragment	FALSE	canonical	3	244	junction_2	18.3847763108502	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAAAGGCAAATTTCCA	1893	False	NA	NA	False	AATAAA	-23	NA	79309912	79325467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019
ES.31169.40	chr7	+	4813	7	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	27394	6	16669	-6	3prime_fragment	FALSE	canonical	3	220	junction_2	27.5605394238453	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGCTTATTACTTTC	NA	False	NA	10	True	ATTAAA	-20	NA	79337337	79347890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.41	chr7	+	2091	3	ISM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	34386	771	23661	-757	3prime_fragment	FALSE	canonical	3	279	junction_1	11.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCTTTTCTCTGGGT	NA	False	NA	NA	False	AAAAAG	-10	NA	79344329	79347125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79345571_79345682_79345809_79346401
ES.31169.5	chr7	+	1499	1	FSM	ENSMUSG00000046591.11	ENSMUST00000205750.2	1452	1	-21	-26	5	26	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACAACAAAAATCTCAC	1929	False	NA	NA	False	NA	NA	NA	79309948	79311447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79309900_79311400
ES.31169.6	chr7	+	6542	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	18	639	-8	-625	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGGCATTTCTGCCTG	1942	False	NA	NA	False	AATAAA	-18	NA	79309961	79347257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.7	chr7	+	9250	20	NIC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-7	0	intron_retention	FALSE	canonical	3	202	junction_6	27.9914905945784	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1943	False	NA	16	True	ATTAAA	-26	NA	79309962	79347896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332801_79333951_79334010_79335524_79335687_79337973_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.8	chr7	+	7171	22	NNC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.4655644137831	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAAAATGCTTATTACT	1949	False	NA	7	True	ATTAAA	-17	NA	79309968	79347887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330763_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.31169.9	chr7	+	7163	22	NNC	ENSMUSG00000046591.11	novel	7199	22	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.5211553507171	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTATTACTTTCCCAGT	1949	False	NA	15	True	ATTAAA	-25	NA	79309968	79347895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320734_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ES.3117.1	chr10	+	4914	1	Antisense	novelGene_ENSMUSG00000020196.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCAGATGGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	75480726	75485640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_75480700_75485600
ES.31170.1	chr7	+	131	1	Antisense	novelGene_ENSMUSG00000030546.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	5399	False	NA	NA	False	NA	NA	NA	79370522	79370653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_79370500_79370700
ES.31171.1	chr7	+	2326	17	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	4.03451902337813	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	562	False	NA	1	True	AATAAA	-16	NA	79392887	79435698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79398829_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79418106_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ES.31171.2	chr7	+	3868	14	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-23	-2	intron_retention	FALSE	canonical	0	0	junction_7	4.70427226197559	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGCGGTTCATCC	562	False	NA	-1	True	AATAAA	-14	NA	79392887	79435696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79398829_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79419088_79419261_79420725_79420797_79421264_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ES.31171.3	chr7	+	2266	18	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.34020394016393	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	574	False	NA	1	True	AATAAA	-16	NA	79392899	79435698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79398829_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79416137_79416174_79418106_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423184_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ES.31171.4	chr7	+	4407	11	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-9	-13754	intron_retention	FALSE	non_canonical	0	0	junction_1	3.68917334913934	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTAACAGTGTCCTGTG	576	False	NA	NA	False	NA	NA	NA	79392901	79421944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79396252_79396400_79398829_79399168_79399712_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79418106_79418192_79419088_79419261_79420677_79420797_79421264
ES.31171.5	chr7	+	2217	17	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.38347393627474	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGGTGCGGTTCATC	584	False	NA	-2	True	AATAAA	-13	NA	79392909	79435695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79398829_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79418106_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423184_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ES.31171.6	chr7	+	2340	18	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	4.03616865844905	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGCGGTTCATCCTT	584	False	NA	1	True	AATAAA	-16	NA	79392909	79435698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79392986_79398829_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79411207_79411247_79416137_79416174_79418106_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860_79427054_79435463
ES.31171.7	chr7	+	1127	5	NNC	ENSMUSG00000039099.8	novel	2285	18	NA	NA	29136	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.68487097856047	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGCGGTTCATCCTTGC	NA	False	NA	3	True	AATAAA	-18	NA	79422046	79435700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79422269_79425259_79425324_79426123_79426535_79426860_79427054_79435463
ES.31172.1	chr7	+	1444	2	FSM	ENSMUSG00000030543.11	ENSMUST00000107394.3	1944	2	492	8	492	-8	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAACTTGTTTGCTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	79460966	79463179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79461508_79462276
ES.31173.1	chr7	+	134	1	Intergenic	novelGene_25622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACATC	5118	False	NA	NA	False	NA	NA	NA	79541271	79541405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79541300_79541400
ES.31174.1	chr7	+	3315	3	NNC	ENSMUSG00000097699.3	novel	1690	2	NA	NA	44	8101	intron_retention	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCTCAGATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	79570514	79580370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79570688_79575932_79579060_79580355
ES.31174.2	chr7	+	2662	1	Genic_Genomic	ENSMUSG00000097699.3	novel	NA	NA	NA	NA	45	908	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAATTAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79570515	79573177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_79570500_79573200
ES.31174.3	chr7	+	2613	1	Antisense	novelGene_ENSMUSG00000039043.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAATGCCAGCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	79576492	79579105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_79576500_79579100
ES.31175.1	chr7	-	3499	12	NNC	ENSMUSG00000030549.7	novel	2090	11	NA	NA	-43761	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	5.13937964549184	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGGGAGTGGATGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	79311166	79243111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087_79267546_79309896
ES.31175.2	chr7	-	3330	13	NNC	ENSMUSG00000030549.7	novel	2090	11	NA	NA	-43691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	6.19811799392902	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGACTGGGGAGTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	79311096	79243116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087_79267546_79309896_79310093_79310186
ES.31175.3	chr7	-	1868	11	NIC	ENSMUSG00000030549.7	novel	2090	11	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.31883445878888	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGACTGGGGAGTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	79267312	79243116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79243426_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ES.31175.4	chr7	-	3092	12	NNC	ENSMUSG00000030549.7	novel	2090	11	NA	NA	-43656	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.91398398810567	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGACTGGGGAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	79311061	79243118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248838_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087_79267546_79310186
ES.31175.5	chr7	-	2825	2	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGATACTACAGCTTG	NA	False	NA	NA	False	NA	NA	NA	79311102	79274601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79276221_79309896
ES.31175.6	chr7	-	1590	3	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACTGTAGTGAACACCT	NA	False	NA	NA	False	GGGGCT	-14	NA	79311096	79299360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79299845_79309896_79310093_79310186
ES.31176.1	chr7	-	1449	2	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGACCTGGGTCTCATC	NA	False	NA	NA	False	NA	NA	NA	79322781	79321261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79321670_79321740
ES.31176.2	chr7	-	5011	1	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79326292	79321281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79321300_79326300
ES.31177.1	chr7	-	2293	2	Intergenic	novelGene_25613	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGAATCCAGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	79531499	79330905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79333137_79531437
ES.31177.10	chr7	-	4209	18	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_17	15.0484799034602	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365455	79347845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79365412
ES.31177.12	chr7	-	4594	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.6776053484699	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365603	79347845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357423_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360730_79361160_79361362_79363578_79363931_79365412
ES.31177.13	chr7	-	10005	13	NIC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	34	junction_10	8.5764535535124	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79363933	79347846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79348664_79348897_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79356637_79356736_79356853_79357267_79359031_79359792_79360313_79360450_79360845_79361160
ES.31177.16	chr7	-	6705	10	NIC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	6077	0	intron_retention	FALSE	canonical	3	40	junction_8	7.36357401145817	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79357857	79347846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79356637_79356736_79356853_79357267
ES.31177.19	chr7	-	4505	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.1382067069657	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGCTTACATCTTA	NA	False	NA	-3	True	AATAAA	-12	NA	79365471	79347848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352653_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.2	chr7	-	532	1	Intergenic	novelGene_25614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79333639	79333107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79333100_79333600
ES.31177.20	chr7	-	4650	18	NIC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	14	-2	intron_retention	FALSE	canonical	3	29	junction_11	9.09503838273325	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGCTTACATCTTA	NA	False	NA	-3	True	AATAAA	-12	NA	79365454	79347848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79348664_79348897_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.21	chr7	-	4009	16	NNC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	3014	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	14.4907633415988	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGCTTACATCTTA	NA	False	NA	-3	True	AATAAA	-12	NA	79360920	79347848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350881_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450
ES.31177.22	chr7	-	4140	10	NNC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	7146	-2	intron_retention	FALSE	canonical	3	8	junction_9	15.2833323235995	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGCTTACATCTTA	NA	False	NA	-3	True	AATAAA	-12	NA	79356788	79347848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79354578_79356483_79356634_79356736
ES.31177.23	chr7	-	4554	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.0341885702523	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGGCTTACATCTTA	NA	False	NA	-3	True	AATAAA	-12	NA	79365444	79347848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350133_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358161_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.25	chr7	-	4365	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	-1	213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.0787029425018	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTGACTGCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	79365469	79348062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356479_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.27	chr7	-	314	1	Intergenic	novelGene_25615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAGCCAAGTAAGT	NA	False	NA	NA	False	NA	NA	NA	79374151	79373837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79373800_79374200
ES.31177.28	chr7	-	175	1	Intergenic	novelGene_25616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	79374153	79373978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79374000_79374200
ES.31177.29	chr7	-	7014	1	FSM	ENSMUSG00000030545.10	ENSMUST00000205297.2	1475	1	-4246	-1293	110	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392718	79385704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79385700_79392700
ES.31177.3	chr7	-	5539	3	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79343508	79336246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79339714_79340618_79340748_79341565
ES.31177.30	chr7	-	2242	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	-2	1	-2	-1	multi-exon	TRUE	canonical	3	20	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCGTCTGTGAGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	79392830	79385705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79387659_79389912_79390029_79392657
ES.31177.31	chr7	-	158	1	Intergenic	novelGene_25617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	79395710	79395552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79395600_79395700
ES.31177.32	chr7	-	175	1	Intergenic	novelGene_25618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATGTATGTCAGACG	NA	False	NA	NA	False	NA	NA	NA	79396895	79396720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79396700_79396900
ES.31177.33	chr7	-	180	1	Intergenic	novelGene_25619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAAAAAAACATTTAAT	NA	False	NA	NA	False	NA	NA	NA	79397233	79397053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79397100_79397200
ES.31177.34	chr7	-	172	1	Intergenic	novelGene_25620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAGATAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	79401618	79401446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79401400_79401600
ES.31177.35	chr7	-	178	1	Intergenic	novelGene_25621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79433098	79432920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79432900_79433100
ES.31177.36	chr7	-	3946	22	NNC	ENSMUSG00000039062.16	novel	3797	21	NA	NA	-194	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	4.91192265075338	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGACTTGTCACTCA	NA	False	NA	-1	True	AATAAA	-16	NA	79511001	79471550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79510666_79510754_79510873
ES.31177.37	chr7	-	3830	21	FSM	ENSMUSG00000039062.16	ENSMUST00000107392.8	3797	21	-34	1	-34	0	multi-exon	FALSE	canonical	1	4	junction_7	3.71853465763061	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCCAGACTTGTCACTC	6766	False	NA	-2	True	AATAAA	-15	NA	79497992	79471551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79497892
ES.31177.38	chr7	-	3478	19	NIC	ENSMUSG00000039062.16	novel	3422	20	NA	NA	44	-1	intron_retention	FALSE	canonical	1	4	junction_7	3.41248615065249	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTCCAGACTTGTCACT	NA	False	NA	-3	True	AATAAA	-14	NA	79492056	79471552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385
ES.31177.39	chr7	-	3715	20	NIC	ENSMUSG00000039062.16	novel	3797	21	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	4.14087121321494	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTCCAGACTTGTCAC	6813	False	NA	-4	True	AATAAA	-13	NA	79497945	79471553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79497892
ES.31177.4	chr7	-	3621	3	Antisense	novelGene_ENSMUSG00000046591.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAGCCAAGAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	79343508	79338164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79339714_79340618_79340748_79341565
ES.31177.40	chr7	-	4169	20	NIC	ENSMUSG00000039062.16	novel	3797	21	NA	NA	3	-6	intron_retention	FALSE	canonical	1	4	junction_7	3.80552157526847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGCTTCCAGACTTG	6830	False	NA	-8	True	AATAAA	-9	NA	79497928	79471557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79492409_79497892
ES.31177.41	chr7	-	1631	4	ISM	ENSMUSG00000039062.16	ENSMUST00000107392.8	3797	21	13	18795	-4	1458	5prime_fragment	FALSE	canonical	1	5	junction_3	2.82842712474619	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGCCTTGCTTTTAAT	6813	False	NA	NA	False	NA	NA	NA	79497945	79490345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79490758_79490833_79490977_79491385_79492409_79497892
ES.31177.42	chr7	-	5123	7	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.726365273589	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGCCATGCATTTCAC	NA	False	NA	0	True	AATAAA	-16	NA	79570427	79525070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.43	chr7	-	4705	5	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-353	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.643705414099	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGCCATGCATTTCA	NA	False	NA	-1	True	AATAAA	-15	NA	79570750	79525071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79529123_79559582_79559655_79564894_79565007_79565763_79565856_79570372
ES.31177.44	chr7	-	5802	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	12	-1	12	1	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGCCATGCATTTCA	NA	False	NA	-1	True	AATAAA	-15	NA	79570385	79525071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.45	chr7	-	4125	7	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-10	-976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.726365273589	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGCTATAGGTCAGTA	NA	False	NA	NA	False	NA	NA	NA	79570407	79526048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.46	chr7	-	4832	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	3	978	3	-978	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTGGCTATAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	79570394	79526050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.47	chr7	-	3922	7	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-16	-1132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.726365273589	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGTTTGTTTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	79570360	79526204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.48	chr7	-	2883	7	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-23	-2178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.726365273589	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTCTGAGATCTCTAT	NA	False	NA	NA	False	NA	NA	NA	79570367	79527250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.49	chr7	-	3267	5	NIC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	-9	-2394	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	136.926074945571	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGGTTTTGGGTCTACT	NA	False	NA	NA	False	NA	NA	NA	79570353	79527466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79530361_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.5	chr7	-	4746	19	FSM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	-148	-21	-148	21	multi-exon	FALSE	canonical	3	29	junction_12	9.36634374031449	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCCCAAGAATTCCTGA	NA	False	NA	21	True	AATAAA	-36	NA	79365616	79347824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.50	chr7	-	3387	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	27	2399	-26	-2399	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCGTGGGGTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	79570370	79527471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.51	chr7	-	2363	5	NNC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	5430	-2403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.434696042354	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCAGGCGTGGGGTTTT	NA	False	NA	NA	False	NA	NA	NA	79564914	79527475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79527736_79528457_79530361_79532213_79532322_79559582_79559655_79564894
ES.31177.52	chr7	-	2018	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	-1	3796	-1	3390	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTTAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	79570398	79528868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.53	chr7	-	1446	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	-6	4373	-6	2813	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACCAGTCTCAGATTCT	NA	False	NA	59	True	AATGAA	-35	NA	79570403	79529445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ES.31177.54	chr7	-	204	1	Intergenic	novelGene_25623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGTAGGGAGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	79548741	79548537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79548500_79548700
ES.31177.55	chr7	-	3768	3	ISM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	30	36369	-23	-29183	5prime_fragment	FALSE	canonical	3	294	junction_2	2	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATATTACTTAAATACAA	NA	False	NA	NA	False	NA	NA	NA	79570367	79561441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79565007_79565763_79565856_79570256
ES.31177.56	chr7	-	4537	2	NIC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	18	-29183	intron_retention	FALSE	canonical	3	294	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATATTACTTAAATACAA	NA	False	NA	NA	False	NA	NA	NA	79570379	79561441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79565856_79570256
ES.31177.57	chr7	-	5722	1	NIC	ENSMUSG00000063801.8	novel	5813	6	NA	NA	58	-32306	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGATGTCCACCAGA	NA	False	NA	NA	False	NA	NA	NA	79570286	79564564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79564600_79570300
ES.31177.6	chr7	-	4576	19	NNC	ENSMUSG00000050382.15	novel	4093	19	NA	NA	6	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9587624446707	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCCCCCAAGAATT	NA	False	NA	16	True	AATAAA	-31	NA	79365462	79347829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348905_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352028_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ES.31177.9	chr7	-	4970	19	NNC	ENSMUSG00000050382.15	novel	4577	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	13.200261875442	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365412	79347845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79364963
ES.31178.1	chr7	-	4784	7	Fusion	ENSMUSG00000108350.2_ENSMUSG00000039043.6	novel	2277	6	NA	NA	78	-84	multi-exon	FALSE	canonical	0	0	junction_1	17.220788470786	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTATTAAATATACTTT	9971	False	NA	NA	False	AATAAA	-15	NA	79585029	79572403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_79574186_79574305_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ES.31178.2	chr7	-	2695	7	Fusion	ENSMUSG00000108350.2_ENSMUSG00000039043.6	novel	2277	6	NA	NA	105	-86	multi-exon	FALSE	non_canonical	0	0	junction_1	17.220788470786	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATTATTAAATATACT	9998	False	NA	NA	False	AATAAA	-13	NA	79585002	79572405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_79572555_79574734_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ES.31178.3	chr7	-	1786	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	33	458	33	-458	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTCCCAGACCGTATT	9926	False	NA	44	True	NA	NA	NA	79585074	79575566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ES.31179.1	chr7	+	177	1	Intergenic	novelGene_25625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAGTGACAACTTAA	NA	False	NA	NA	False	NA	NA	NA	79612352	79612529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79612400_79612500
ES.3118.1	chr10	-	7177	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	50	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.9787870491139	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCTTTGCTCATCCTG	NA	False	NA	-1	True	AATAAA	-16	NA	75600054	75481942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549480_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561516_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.10	chr10	-	7346	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	19.4961218049154	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	-3	True	AATAAA	-14	NA	75600152	75481944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561516_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.11	chr10	-	3831	11	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	1816	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.7458394303765	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	-3	True	AATAAA	-14	NA	75534393	75481944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75533259
ES.3118.12	chr10	-	5926	29	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	5116	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	26.6525977981088	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75582536	75481945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553362_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575180_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321
ES.3118.13	chr10	-	7307	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0692977658841	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600038	75481945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482518_75482702_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.14	chr10	-	7344	38	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.8540424176698	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600038	75481945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75513107_75513147_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.15	chr10	-	7047	29	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	214	0	intron_retention	FALSE	canonical	0	0	junction_11	21.8425488159123	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75587438	75481945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269
ES.3118.16	chr10	-	7432	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.0050148853797	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCCTCTTTGCTCAT	NA	False	NA	-5	True	AATAAA	-12	NA	75600150	75481946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482948_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494463_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.18	chr10	-	4601	8	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	103166	2	6682	-2	3prime_fragment	FALSE	canonical	3	86	junction_6	11.9026664822533	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGCCTCTTTGCTCA	NA	False	NA	-6	True	AATAAA	-11	NA	75496984	75481947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467
ES.3118.19	chr10	-	7334	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	23.8699537359842	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGCCTCTTTGCTCA	NA	False	NA	-6	True	AATAAA	-11	NA	75600160	75481947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561516_75562719_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599847
ES.3118.2	chr10	-	7470	37	FSM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	-51	-2	-26	2	multi-exon	FALSE	canonical	3	63	junction_35	14.4571258434836	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	75600201	75481943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.20	chr10	-	7283	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_36	19.3564676402016	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCTGCCTCTTTGCTC	NA	False	NA	-7	True	AATAAA	-10	NA	75600088	75481948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591266_75599858
ES.3118.21	chr10	-	7451	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.0861378094139	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCTGCCTCTTTGCTC	NA	False	NA	-7	True	AATAAA	-10	NA	75600173	75481948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551599_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.22	chr10	-	7206	36	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	20.1975144965101	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCTGCCTCTTTGCTC	NA	False	NA	-7	True	AATAAA	-10	NA	75600149	75481948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.24	chr10	-	7248	38	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	73	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	28.9083840371719	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTCTGCCTCTTTGCTC	NA	False	NA	-7	True	AATAAA	-10	NA	75600031	75481948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75513107_75513147_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561591_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.25	chr10	-	5890	18	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-34	-4	intron_retention	FALSE	canonical	3	17	junction_11	23.2559104367517	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCTCTGCCTCTTTGCT	NA	False	NA	-8	True	AATAAA	-9	NA	75568279	75481949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233
ES.3118.26	chr10	-	2701	10	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	45.070315434145	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	False	NA	-11	True	AATAAA	-6	NA	75503929	75481952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75503375_75503753_75503848
ES.3118.29	chr10	-	9188	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-11	-7	intron_retention	FALSE	canonical	0	0	junction_6	24.1391925565863	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	False	NA	-11	True	AATAAA	-6	NA	75600161	75481952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493440_75493521_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.3	chr10	-	7241	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	22.3003487765451	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	75600133	75481943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561516_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.30	chr10	-	7386	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	20.0768584921441	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	False	NA	-11	True	AATAAA	-6	NA	75600147	75481952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575180_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.31	chr10	-	5048	25	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.9437999397664	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	False	NA	-11	True	AATAAA	-6	NA	75600153	75481952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482011_75552502_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599847
ES.3118.32	chr10	-	4316	20	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.6967047796825	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	False	NA	-11	True	AATAAA	-6	NA	75569580	75481952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482948_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561220_75561382_75561516_75562691_75562854_75568233_75568350_75569453
ES.3118.33	chr10	-	5611	30	NNC	ENSMUSG00000020196.11	novel	2115	7	NA	NA	-4	-4526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4507290084136	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCTGACAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	75600154	75498155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75498596_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.34	chr10	-	5009	23	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	1	74102	1	1105	5prime_fragment	FALSE	canonical	3	63	junction_21	9.9474860813596	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCGTGAAAATGCCTCC	NA	False	NA	NA	False	NA	NA	NA	75600149	75556047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.35	chr10	-	5028	23	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-12	1100	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	18.8590355835206	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAGTCGTGAAAATG	NA	False	NA	NA	False	NA	NA	NA	75600162	75556052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599847
ES.3118.36	chr10	-	4190	2	NNC	ENSMUSG00000020196.11	novel	634	4	NA	NA	550	1099	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAGTCGTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	75560518	75556053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75559747_75560021
ES.3118.37	chr10	-	5743	21	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	1	1099	intron_retention	FALSE	canonical	2	4	junction_20	24.115295975791	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAGTCGTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	75600149	75556053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75557374_75561092_75561516_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591266_75599858
ES.3118.38	chr10	-	180	1	Intergenic	novelGene_2447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGGTGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	75578919	75578739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75578700_75578900
ES.3118.39	chr10	-	2117	9	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	45	99728	-1	4226	5prime_fragment	FALSE	canonical	3	63	junction_7	8.52936105461599	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTAATGGAATTGTA	NA	False	NA	NA	False	ATTAAA	-28	NA	75600105	75581673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.4	chr10	-	1515	5	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	11043	2	intron_retention	FALSE	canonical	3	93	junction_3	9.75961064797157	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	75492623	75481943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608
ES.3118.5	chr10	-	7368	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	18.2485201497086	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	75600186	75481943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.6	chr10	-	4770	11	ISM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	62332	-2	-1609	2	3prime_fragment	FALSE	canonical	3	64	junction_10	16.2668374307977	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTTGCTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	75537818	75481943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746
ES.3118.8	chr10	-	9118	36	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	12	1	intron_retention	FALSE	canonical	3	63	junction_34	14.638501094228	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	-3	True	AATAAA	-14	NA	75600163	75481944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ES.3118.9	chr10	-	7480	37	NNC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_36	19.7007512233781	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTGCTCATCC	NA	False	NA	-3	True	AATAAA	-14	NA	75600201	75481944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599847
ES.31180.1	chr7	-	218	1	Intergenic	novelGene_25624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGAATTCCCCTCTCCC	NA	False	NA	NA	False	AATAAA	-37	NA	79598684	79598466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79598500_79598700
ES.31180.2	chr7	-	215	2	Antisense	novelGene_ENSMUSG00002076150.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	16	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGGGAATTCCCCTCT	NA	False	NA	NA	False	AATAAA	-34	NA	79654223	79598469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79598634_79654172
ES.31180.3	chr7	-	179	1	Intergenic	novelGene_25626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATTTTGTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	79630544	79630365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79630400_79630500
ES.31180.4	chr7	-	183	1	Intergenic	novelGene_25627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAGTGCCAA	NA	False	NA	NA	False	NA	NA	NA	79641217	79641034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79641000_79641200
ES.31180.5	chr7	-	179	1	Intergenic	novelGene_25628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79654224	79654045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79654000_79654200
ES.31181.1	chr7	+	290	1	Intergenic	novelGene_25629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	79658795	79659085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79658800_79659100
ES.31182.1	chr7	-	171	1	Intergenic	novelGene_25630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCACTTCATTTAA	NA	False	NA	NA	False	NA	NA	NA	79663257	79663086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79663100_79663300
ES.31183.1	chr7	-	1086	1	Intergenic	novelGene_25631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTTCACCTAGCGAAG	NA	False	NA	NA	False	NA	NA	NA	79665026	79663940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79663900_79665000
ES.31184.1	chr7	+	154	1	Intergenic	novelGene_25632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	5349	False	NA	NA	False	NA	NA	NA	79665585	79665739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79665600_79665700
ES.31185.1	chr7	+	185	1	Intergenic	novelGene_25633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTTGTTTTGAGACA	5928	False	NA	NA	False	NA	NA	NA	79666164	79666349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79666200_79666300
ES.31186.1	chr7	+	4577	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	-124	1418	-124	6	multi-exon	TRUE	canonical	3	72	junction_4	112.192635676322	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGTGCTTCTTGGTGCT	NA	False	NA	24	True	AATAAA	-24	NA	79674437	79742503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.10	chr7	+	2533	3	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	12	4980	12	4	intron_retention	FALSE	canonical	3	198	junction_1	66.5	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTTGAGTGCTGTGTAA	NA	False	NA	5	True	AATAAA	-13	NA	79674593	79736598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79674735_79730796_79732289_79735698
ES.31186.11	chr7	+	4014	6	NNC	ENSMUSG00000048897.16	novel	3606	6	NA	NA	43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	138.252522580964	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGTGACTGTACGTGCTT	NA	False	NA	15	True	AATAAA	-15	NA	79674624	79742494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082_79741695_79742061
ES.31186.12	chr7	+	3044	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	148	1529	148	-610	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTACCAACCACAGGGT	NA	False	NA	NA	False	NA	NA	NA	79675932	79740968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.13	chr7	+	3465	3	NNC	ENSMUSG00000048897.16	novel	4721	5	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79675973	79742497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79676232_79730796_79731811_79740304
ES.31186.14	chr7	+	4496	6	NIC	ENSMUSG00000048897.16	novel	4721	5	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	152.282106631081	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGACTGTACGTGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	79676105	79742495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
ES.31186.15	chr7	+	4343	5	NNC	ENSMUSG00000048897.16	novel	4721	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	150.28701707067	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79676122	79742497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736317_79740082
ES.31186.16	chr7	+	3062	4	NIC	ENSMUSG00000048897.16	novel	393	2	NA	NA	-686	7	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	157.404644855932	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGAGTGCTGTGTAACTC	NA	False	NA	8	True	AATAAA	-16	NA	79676875	79736601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79677834_79730796_79732289_79735698_79735891_79736181
ES.31186.17	chr7	+	5289	6	NNC	ENSMUSG00000048897.16	novel	393	2	NA	NA	-664	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.380557884384	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGACTGTACGTGCTTC	NA	False	NA	16	True	AATAAA	-16	NA	79676897	79742495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79677834_79730569_79730651_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.18	chr7	+	4518	5	NNC	ENSMUSG00000048897.16	novel	393	2	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	153.901551324215	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGGTGACTGTACGTGC	NA	False	NA	13	True	AATAAA	-13	NA	79677576	79742492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79677826_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.19	chr7	+	3241	1	Intergenic	novelGene_25635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGCAGACTCTGTGCT	2372	False	NA	NA	False	NA	NA	NA	79712787	79716028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79712800_79716000
ES.31186.2	chr7	+	3407	6	FSM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-42	241	-22	-241	multi-exon	FALSE	canonical	2	5	junction_5	149.360503480673	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGTCTATCATCTTT	NA	False	NA	23	True	AAGAAA	-20	NA	79674539	79741337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
ES.31186.20	chr7	+	3382	3	ISM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	53381	-4	51954	4	3prime_fragment	FALSE	canonical	3	331	junction_1	9.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTTGAGTGCTGTGTAA	NA	False	NA	5	True	AATAAA	-13	NA	79729515	79736598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79732289_79735698_79735891_79736181
ES.31186.21	chr7	+	3665	1	NIC	ENSMUSG00000048897.16	novel	5871	5	NA	NA	52948	-2420	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTGTACCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	79730509	79734174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79730500_79734200
ES.31186.22	chr7	+	1895	4	NNC	ENSMUSG00000048897.16	novel	5871	5	NA	NA	58137	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	150.911305813124	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGGTGACTGTACGTGC	NA	False	NA	13	True	AATAAA	-13	NA	79735698	79742492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79735891_79736181_79736357_79740082_79741140_79742021
ES.31186.3	chr7	+	3308	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	-21	2584	-21	-241	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGTCTATCATCTTT	NA	False	NA	23	True	AAGAAA	-20	NA	79674540	79741337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.4	chr7	+	2293	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-32	4973	-12	11	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTGTGTAACTCATGT	NA	False	NA	12	True	AATAAA	-20	NA	79674549	79736605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
ES.31186.5	chr7	+	1949	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-30	5315	-10	-331	5prime_fragment	FALSE	canonical	3	198	junction_1	67.6214955961983	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGCTCCAGCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	79674551	79736263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
ES.31186.6	chr7	+	5955	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	-1232	-2	-9	2	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTACGTGCTTCTTGG	NA	False	NA	20	True	AATAAA	-20	NA	79674552	79742499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ES.31186.7	chr7	+	4549	6	FSM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-25	-918	-5	-1	multi-exon	FALSE	canonical	2	5	junction_5	149.360503480673	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGACTGTACGTGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	79674556	79742496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
ES.31186.8	chr7	+	3538	2	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	-4	7401	-4	-2417	5prime_fragment	FALSE	canonical	3	198	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTACCTGGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	79674577	79734177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79674735_79730796
ES.31186.9	chr7	+	3754	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	-1554	-6	-1	6	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGAGTGCTGTGTAACT	NA	False	NA	7	True	AATAAA	-15	NA	79674580	79736600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
ES.31187.1	chr7	+	2302	1	Antisense	novelGene_ENSMUSG00000030541.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTGGTTGTGGCTTAT	5787	False	NA	NA	False	TTTAAA	-17	NA	79748965	79751267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_79749000_79751300
ES.31188.1	chr7	+	188	1	Intergenic	novelGene_25637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAACCTCAACAAGGTA	NA	False	NA	NA	False	AATATA	-11	NA	79754778	79754966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79754800_79755000
ES.31189.1	chr7	+	603	2	Intergenic	novelGene_25638	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAGGTTAATGAATTG	3792	False	NA	NA	False	AAGAAA	-18	NA	79765167	79767765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79765480_79767474
ES.3119.1	chr10	-	669	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	-13	-7	-13	4	multi-exon	FALSE	canonical	3	462	junction_2	12	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGCTTCTGTAACC	NA	False	NA	0	True	AATAAA	-25	NA	75609261	75607059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75607341_75608571_75608748_75609049
ES.3119.3	chr10	-	2137	1	NIC	ENSMUSG00000001666.9	novel	649	3	NA	NA	45	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGACTTCTTTGCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	75609203	75607066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75607100_75609200
ES.3119.4	chr10	-	671	3	NNC	ENSMUSG00000001666.9	novel	649	3	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	232.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATGACTTCTTTGCT	NA	False	NA	-9	True	AATAAA	-16	NA	75609262	75607068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75607341_75608571_75608748_75609039
ES.3119.5	chr10	-	812	3	NNC	ENSMUSG00000001666.9	novel	649	3	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATGACTTCTTTGCT	NA	False	NA	-9	True	AATAAA	-16	NA	75609234	75607068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75607341_75608571_75608927_75609049
ES.31190.1	chr7	-	5776	1	Antisense	novelGene_ENSMUSG00000048897.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCAAAAGAACAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	79675228	79669452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79669500_79675200
ES.31191.1	chr7	-	1889	4	Antisense	novelGene_ENSMUSG00000108365.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCACCCTCCCTCCGGC	6847	False	NA	NA	False	NA	NA	NA	79736261	79676106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79676230_79730794_79732287_79735696_79735889_79736179
ES.31191.2	chr7	-	2107	4	Antisense	novelGene_ENSMUSG00000108365.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACATTAATGACCGTTTT	6847	False	NA	NA	False	NA	NA	NA	79736261	79677492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79677834_79730794_79732287_79735696_79735889_79736179
ES.31191.3	chr7	-	2699	4	Antisense	novelGene_ENSMUSG00000108365.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGCCAAGGTCTCCAA	6847	False	NA	NA	False	NA	NA	NA	79736261	79678095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79679029_79730794_79732287_79735696_79735889_79736179
ES.31191.4	chr7	-	177	1	Intergenic	novelGene_25634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTTTTAAAAACCT	2379	False	NA	NA	False	NA	NA	NA	79700450	79700273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79700300_79700400
ES.31191.5	chr7	-	170	1	Intergenic	novelGene_25636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTGCTAAATCCC	5169	False	NA	NA	False	NA	NA	NA	79728172	79728002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79728000_79728200
ES.31192.1	chr7	-	8975	3	Fusion	ENSMUSG00000030541.17_ENSMUSG00000108655.2	novel	1745	11	NA	NA	148	1	intron_retention	FALSE	canonical	3	1495	junction_2	116	689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTTTCTCTCTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	79748009	79738728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_79745645_79745770_79747704_79747883
ES.31192.10	chr7	-	2096	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	1495	junction_4	203.626988921616	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765074	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.11	chr7	-	4560	6	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	1775	junction_3	179.528939171377	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765066	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79745462_79745546_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.12	chr7	-	3815	6	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	780.899225252529	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765051	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79747704_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.13	chr7	-	4062	7	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	1692	junction_2	184.160633385338	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765066	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79745462_79745546_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.14	chr7	-	4228	6	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	1775	junction_3	180.998784526306	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765066	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.15	chr7	-	2785	8	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1616	junction_3	190.373639060085	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765085	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.16	chr7	-	2610	9	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	-187	0	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765327	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.17	chr7	-	4017	8	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	1727	junction_3	168.53571050162	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765066	79744593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.18	chr7	-	1848	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	1616	junction_4	181.074024832762	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765067	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.19	chr7	-	1672	11	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	-932	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	578.773012501447	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79766072	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79765910
ES.31192.2	chr7	-	7046	3	Fusion	ENSMUSG00000030541.17_ENSMUSG00000108655.2	novel	1085	5	NA	NA	-211	-2	multi-exon	FALSE	canonical	3	1727	junction_2	90	687	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGCTTTCTCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	79745988	79738731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_79745462_79745546_79745645_79745770
ES.31192.20	chr7	-	1531	10	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	604.630241052382	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765067	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.22	chr7	-	3337	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	1495	junction_4	200.946341342074	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765068	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.23	chr7	-	2104	10	NNC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	-14742	0	intron_retention	FALSE	canonical	0	0	junction_9	610.282165057815	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79779882	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79779786
ES.31192.25	chr7	-	3907	4	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	89	0	intron_retention	FALSE	canonical	3	1727	junction_2	223.608785357125	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79748798	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79745462_79745546_79745645_79745770_79748663_79748745
ES.31192.27	chr7	-	1621	11	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_5	874.349638302664	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765118	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79746919_79746959_79747551_79747704_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.28	chr7	-	2510	9	NNC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_4	647.519871799314	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765096	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79746019_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.29	chr7	-	3688	8	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	27	0	intron_retention	FALSE	canonical	3	1692	junction_3	173.995073821892	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765113	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.3	chr7	-	8536	4	ISM	ENSMUSG00000030541.17_ENSMUSG00000108655.2	ENSMUST00000139178.8	1085	5	261	-6044	261	-3	intron_retention	FALSE	canonical	3	1727	junction_3	105.981130395934	689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATGGCTTTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	79747896	79738732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770
ES.31192.31	chr7	-	1794	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	1495	junction_4	210.153265646119	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765067	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.32	chr7	-	2204	10	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	-25	0	intron_retention	FALSE	canonical	3	1495	junction_5	208.084918562911	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765105	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.33	chr7	-	2442	8	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	1616	junction_3	195.213331762867	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765078	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.34	chr7	-	1887	11	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	13	0	intron_retention	FALSE	canonical	1	8	junction_5	759.377909870968	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	False	NA	-9	True	AAAAAG	-9	NA	79765067	79744597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79746919_79746959_79747551_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.37	chr7	-	1662	11	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	543.994567987586	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTGTCTTGATGTGTT	NA	False	NA	-10	True	AAAAAG	-8	NA	79765068	79744598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748657_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.38	chr7	-	1594	11	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	-449	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	579.335619481488	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTGTCTTGATGTGTT	NA	False	NA	-10	True	AAAAAG	-8	NA	79765589	79744598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79765504
ES.31192.4	chr7	-	5553	10	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	12	3163	intron_retention	FALSE	canonical	1	8	junction_5	797.645207183751	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-20	NA	79765068	79741430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79746919_79746959_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.40	chr7	-	1750	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	-2	intron_retention	FALSE	canonical	3	1495	junction_4	209.369305708453	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTGTCTTGATGTGT	NA	False	NA	-11	True	AAAAAG	-7	NA	79765066	79744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.41	chr7	-	2000	8	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	106	-2	intron_retention	FALSE	canonical	1	8	junction_5	880.593144258054	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTGTCTTGATGTGT	NA	False	NA	-11	True	AAAAAG	-7	NA	79750523	79744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79746919_79746959_79747551_79748663_79748745_79748907_79750490
ES.31192.43	chr7	-	2006	13	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	804.66447027455	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTGTCTTGATGTGT	NA	False	NA	-11	True	AAAAAG	-7	NA	79765074	79744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79753323_79753522_79760662_79760798_79764909
ES.31192.44	chr7	-	1633	11	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	580.916250418251	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTGTCTTGATGTGT	NA	False	NA	-11	True	AAAAAG	-7	NA	79765066	79744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745613_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.45	chr7	-	2485	10	NNC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	7	-2	intron_retention	FALSE	canonical	2	5	junction_9	793.640665649663	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACTGTCTTGATGTGT	NA	False	NA	-11	True	AAAAAG	-7	NA	79765073	79744599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79760662_79760798_79764909
ES.31192.47	chr7	-	1593	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	36	116	-24	67	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGCAGGAACGTGTG	NA	False	NA	NA	False	TTTAAA	-28	NA	79765104	79744709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.48	chr7	-	1883	1	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	-38	-537	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	79748195	79746312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79746300_79748200
ES.31192.49	chr7	-	4569	1	FSM	ENSMUSG00000108494.2	ENSMUST00000206384.2	1831	1	-2731	-7	-2731	7	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	79765113	79760544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79760500_79765100
ES.31192.5	chr7	-	4435	12	NNC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	3	2643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	721.910321575121	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATCACTGCCACCTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	79765049	79741950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79760662_79760801_79764909
ES.31192.6	chr7	-	4292	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	93	-2640	5	2640	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTAATCACTGCCACCT	NA	False	NA	NA	False	AATAAA	-15	NA	79765047	79741953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.7	chr7	-	3819	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	27	-2101	27	2101	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATATTCATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	79765113	79742492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31192.8	chr7	-	1834	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	-86	-3	-86	3	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGATGTGTTTGTCCCCG	NA	False	NA	-2	True	AAAAAG	-16	NA	79765226	79744590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ES.31193.1	chr7	-	361	2	Intergenic	novelGene_25639	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAACCAAAACC	9420	False	NA	NA	False	NA	NA	NA	79781360	79780902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79781092_79781188
ES.31193.2	chr7	-	460	1	Intergenic	novelGene_25640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACCAAAACCAAAACC	9418	False	NA	NA	False	NA	NA	NA	79781362	79780902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79780900_79781400
ES.31193.3	chr7	-	169	1	Intergenic	novelGene_25641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	9420	False	NA	NA	False	NA	NA	NA	79781360	79781191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79781200_79781400
ES.31194.1	chr7	+	4357	1	Intergenic	novelGene_25642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTATGTGTCCCTAAT	NA	False	NA	NA	False	NA	NA	NA	79784582	79788939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79784600_79788900
ES.31195.1	chr7	+	182	1	Intergenic	novelGene_25643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTAAAAGGAGGCT	6113	False	NA	NA	False	NA	NA	NA	79817356	79817538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79817400_79817500
ES.31196.1	chr7	-	135	1	Intergenic	novelGene_25644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2244	False	NA	NA	False	NA	NA	NA	79825399	79825264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79825300_79825400
ES.31197.1	chr7	+	4133	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	-242	58	-242	-58	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGCTCTCCTTTGCT	NA	False	NA	86	True	AATATA	-14	NA	79836346	79876217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.10	chr7	+	204	1	Intergenic	novelGene_25645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACACTTGAAAATCCAA	441	False	NA	NA	False	NA	NA	NA	79843012	79843216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79843000_79843200
ES.31197.11	chr7	+	3619	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	-185	326	-185	-326	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTGTGTAGCCCTGG	5432	False	NA	NA	False	NA	NA	NA	79848003	79875833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.12	chr7	+	3879	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	-117	-2	-117	2	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGAAGGGCTTTGCTT	5500	False	NA	30	True	AATAAA	-32	NA	79848071	79876161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.13	chr7	+	3943	14	NNC	ENSMUSG00000030539.14	novel	3760	14	NA	NA	-14	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.3074488790148	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGCTCTCCTTTGCT	5603	False	NA	6	True	AATATA	-14	NA	79848174	79876331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868810_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.15	chr7	+	3604	14	NNC	ENSMUSG00000030539.14	novel	3760	14	NA	NA	35	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.5094805325634	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGGCCCACATTCCT	5747	False	NA	16	True	AATAAA	-18	NA	79848318	79876147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79848519_79862543_79862708_79863010_79863074_79865300_79865471_79866076_79866189_79866477_79866592_79866780_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.16	chr7	+	2185	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	151	1424	56	-1424	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTGTTTGCTAT	5768	False	NA	NA	False	AATGAA	-16	NA	79848339	79874735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.17	chr7	+	2099	13	NNC	ENSMUSG00000030539.14	novel	3760	14	NA	NA	72	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.4192621625587	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGAAGAGGGATGTTCT	5784	False	NA	NA	False	NA	NA	NA	79848355	79871601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79871196
ES.31197.18	chr7	+	7381	1	FSM	ENSMUSG00000108389.2	ENSMUST00000206885.2	2285	1	-5427	331	-5427	-331	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAACTCCGTTTGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	79853714	79861095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79853700_79861100
ES.31197.19	chr7	+	6759	3	NNC	ENSMUSG00000030539.14	novel	2775	13	NA	NA	17061	1170	intron_retention	TRUE	non_canonical	0	0	junction_2	36.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCCTGGCTTGCTTTC	6123	False	NA	NA	False	AATAAA	-2	NA	79865344	79872750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79865471_79866076_79872262_79872302
ES.31197.2	chr7	+	3665	1	Genic_Genomic	ENSMUSG00000030539.14	novel	NA	NA	NA	NA	-188	-23748	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCAAGGTTCATTGTTT	NA	False	NA	NA	False	NA	NA	NA	79836400	79840065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_79836400_79840100
ES.31197.20	chr7	+	3476	1	NIC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	20991	1170	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCCTGGCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	79869274	79872750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79869300_79872800
ES.31197.3	chr7	+	4252	9	NIC	ENSMUSG00000030539.14	novel	2775	13	NA	NA	-6	21	intron_retention	FALSE	canonical	3	35	junction_1	17.1787477715927	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGAAGAGGGATGTTCT	NA	False	NA	NA	False	NA	NA	NA	79836582	79871601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866592_79866695_79866848_79868630_79868813_79868933
ES.31197.4	chr7	+	2386	15	NNC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	17	-1424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.9719230091619	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTGTTTGCTAT	NA	False	NA	NA	False	AATGAA	-16	NA	79836605	79874735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870195_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.6	chr7	+	3478	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	28	443	-9	-327	multi-exon	FALSE	canonical	3	35	junction_1	17.3394972033593	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTCTGTGTAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	79836616	79875832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ES.31197.7	chr7	+	3626	16	NNC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	24.6248293846317	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGTGGCCCACATT	NA	False	NA	13	True	AATAAA	-15	NA	79836621	79876144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343_79874661_79874819
ES.31197.8	chr7	+	5396	10	NIC	ENSMUSG00000030539.14	novel	2775	13	NA	NA	10	-7	intron_retention	FALSE	canonical	3	35	junction_1	16.2123257484187	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79836635	79871573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868
ES.31197.9	chr7	+	5533	11	NIC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	12	-13	intron_retention	FALSE	canonical	3	35	junction_1	19.3225257148231	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTGGCCCACATTCC	NA	False	NA	15	True	AATAAA	-17	NA	79836637	79876146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866592_79866695_79866848_79868630_79868813_79868933_79870306_79870535_79870703_79873681
ES.31198.1	chr7	-	4399	1	Antisense	novelGene_ENSMUSG00000030539.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGACCTTGCTAAGTTA	8370	False	NA	NA	False	AAAAAG	-38	NA	79871912	79867513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79867500_79871900
ES.31199.1	chr7	-	6443	2	FSM	ENSMUSG00000030538.16	ENSMUST00000144295.2	1150	2	116	-5409	9	1105	multi-exon	FALSE	canonical	3	777	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGTCGATGGGTAGGGACA	2249	False	NA	NA	False	NA	NA	NA	79882363	79875789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79882127_79882257
ES.31199.10	chr7	-	4642	5	NIC	ENSMUSG00000030538.16	novel	772	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	721	junction_2	26.3379479079142	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2130	False	NA	-12	True	AATAAA	-15	NA	79882482	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79882127_79882257
ES.31199.11	chr7	-	2554	5	NIC	ENSMUSG00000030538.16	novel	772	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	33	junction_4	316.696522715359	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2264	False	NA	-12	True	AATAAA	-15	NA	79882348	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79880173_79882257
ES.31199.12	chr7	-	800	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	305.980130073833	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2251	False	NA	-12	True	AATAAA	-15	NA	79882361	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882257
ES.31199.13	chr7	-	2785	4	NIC	ENSMUSG00000030538.16	novel	772	7	NA	NA	-3	0	intron_retention	FALSE	canonical	3	728	junction_2	26.3860232362177	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2264	False	NA	-12	True	AATAAA	-15	NA	79882348	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79880173_79882091_79882127_79882257
ES.31199.14	chr7	-	4631	4	NIC	ENSMUSG00000030538.16	novel	772	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	721	junction_2	29.6348143611905	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2258	False	NA	-12	True	AATAAA	-15	NA	79882354	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79882127_79882257
ES.31199.15	chr7	-	2704	5	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	721	junction_2	29.6595262942617	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTCCTTGTATGATG	2264	False	NA	-14	True	AATAAA	-13	NA	79882348	79876908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79880173_79882091_79882127_79882257
ES.31199.16	chr7	-	950	8	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	343.335261866323	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTCCTTGTATGATG	2264	False	NA	-14	True	AATAAA	-13	NA	79882348	79876908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79879726_79879857_79880063_79880173_79882091_79882127_79882257
ES.31199.17	chr7	-	768	6	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	207	679	-9	6	5prime_fragment	FALSE	canonical	3	721	junction_1	52.8446780669539	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGAACTTCTGGTTTT	2258	False	NA	NA	False	NA	NA	NA	79882354	79877573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
ES.31199.2	chr7	-	995	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	42	10	34	2	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2093	False	NA	-10	True	AATAAA	-17	NA	79882519	79876904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
ES.31199.3	chr7	-	837	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	-133	-2	-26	2	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2107	False	NA	-10	True	AATAAA	-17	NA	79882505	79876904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
ES.31199.4	chr7	-	1146	7	NNC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	296.27052202712	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2283	False	NA	-10	True	AATAAA	-17	NA	79882329	79876904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79881750_79882127_79882257
ES.31199.5	chr7	-	992	5	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-7	2	intron_retention	FALSE	canonical	3	728	junction_3	50.6279320138597	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2292	False	NA	-10	True	AATAAA	-17	NA	79882320	79876904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79878297_79880063_79880173_79882091_79882127_79882257
ES.31199.6	chr7	-	4748	3	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	-18	2	intron_retention	FALSE	canonical	3	777	junction_2	6	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTTGTATGATGGTAG	2222	False	NA	-10	True	AATAAA	-17	NA	79882390	79876904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79882127_79882257
ES.31199.7	chr7	-	4921	3	ISM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	49	11	-33	1	intron_retention	FALSE	canonical	3	721	junction_2	34	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCCTTGTATGATGGTA	2100	False	NA	-11	True	AATAAA	-16	NA	79882512	79876905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_79877135_79877741_79877831_79877909
ES.31199.8	chr7	-	2731	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	721	junction_2	47.5461880701282	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2274	False	NA	-12	True	AATAAA	-15	NA	79882338	79876906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79882127_79882257
ES.312.1	chr1	-	956	1	Antisense	novelGene_ENSMUSG00000026113.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	37449627	37448671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_37448700_37449600
ES.3120.1	chr10	-	1549	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	323	8	-41	-8	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTAATGGTTTTGCTTC	NA	False	NA	-3	True	AATAAA	-15	NA	75616925	75609956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ES.3120.2	chr10	-	2041	5	NIC	ENSMUSG00000001665.12	novel	687	6	NA	NA	-46	-8	intron_retention	FALSE	canonical	0	0	junction_1	9.51314879522022	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTAATGGTTTTGCTTC	NA	False	NA	-3	True	AATAAA	-15	NA	75616930	75609956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75611332_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ES.31200.1	chr7	+	5165	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	-36	-940	-36	940	multi-exon	FALSE	canonical	3	81	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATATCTTGTTATAGT	NA	False	NA	NA	False	AATATA	-17	NA	79882576	79892749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.2	chr7	+	1981	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	-26	2234	-26	-2234	multi-exon	FALSE	canonical	3	81	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTCG	NA	False	NA	27	True	AGTAAA	-30	NA	79882586	79889575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.3	chr7	+	5525	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	13	-1349	13	1349	multi-exon	FALSE	canonical	3	81	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTAATGCTCAGATG	NA	False	NA	NA	False	ATTAAA	-27	NA	79882625	79893158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.4	chr7	+	2533	3	NNC	ENSMUSG00000050973.12	novel	4189	2	NA	NA	27	-2273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAATATAAAAATA	NA	False	NA	-12	True	AATATA	-20	NA	79882639	79889536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79883296_79883623_79883926_79887961
ES.31200.5	chr7	+	4859	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	27	-697	27	697	multi-exon	FALSE	canonical	3	81	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTATTGTGTGTGTGTCT	NA	False	NA	NA	False	TTTAAA	-19	NA	79882639	79892506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.6	chr7	+	3149	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	28	1012	28	-1012	multi-exon	FALSE	canonical	3	81	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAACAGTTGACTAGTG	NA	False	NA	NA	False	TTTAAA	-29	NA	79882640	79890797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.7	chr7	+	719	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	28	3442	28	-3442	multi-exon	FALSE	canonical	3	81	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTTTTCCGGATGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	79882640	79888367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79882954_79887961
ES.31200.8	chr7	+	3184	2	NNC	ENSMUSG00000050973.12	novel	4189	2	NA	NA	3439	-2273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAATATAAAAATA	NA	False	NA	-12	True	AATATA	-20	NA	79886051	79889536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79887661_79887961
ES.31200.9	chr7	+	159	1	Intergenic	novelGene_25646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATCTTTAAAA	1786	False	NA	NA	False	NA	NA	NA	79892889	79893048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79892900_79893000
ES.31201.1	chr7	+	2383	11	NIC	ENSMUSG00000045467.14	novel	2392	13	NA	NA	-20	93	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	5.94053869611166	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGGCCTAGGAGAGATT	5000	False	NA	NA	False	NA	NA	NA	79896103	79909036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79896412_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390
ES.31201.10	chr7	+	4160	7	NIC	ENSMUSG00000045467.14	novel	2723	14	NA	NA	4949	-6	intron_retention	FALSE	canonical	1	1	junction_1	6.91415617089718	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCGCGTGCTGTACCT	NA	False	NA	NA	False	ATTAAA	-14	NA	79902084	79910563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122_79909442_79909820
ES.31201.11	chr7	+	2089	6	NNC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	8875	-4	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_5	6.41872261435249	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	79906010	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79906489_79906592_79906779_79907924_79908106_79908390_79908571_79909122_79909442_79909820
ES.31201.12	chr7	+	2644	3	ISM	ENSMUSG00000045467.14	ENSMUST00000205270.2	2723	14	9355	-147	9355	-4	intron_retention	FALSE	canonical	2	15	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	79906490	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79906779_79907924_79908106_79908390
ES.31201.13	chr7	+	2472	1	NIC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	10960	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCGTGCTGTACCTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	79908095	79910567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79908100_79910600
ES.31201.2	chr7	+	3616	10	NIC	ENSMUSG00000045467.14	novel	2392	13	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	1	junction_5	6	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTGCCGTTTTCAC	5014	False	NA	NA	False	AGTAAA	-16	NA	79896117	79908939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79896412_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390
ES.31201.3	chr7	+	2571	13	FSM	ENSMUSG00000045467.14	ENSMUST00000107381.8	2392	13	-183	4	-4	-4	multi-exon	FALSE	canonical	0	0	junction_6	5.59016994374947	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCTGCCGTTTTCAC	5016	False	NA	NA	False	AGTAAA	-16	NA	79896119	79908939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79896412_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390
ES.31201.4	chr7	+	3799	12	NNC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_1	5.86768711385634	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	5037	False	NA	NA	False	ATTAAA	-16	NA	79896140	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79896428_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903829_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122
ES.31201.5	chr7	+	3120	12	NIC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	18	-6	intron_retention	FALSE	canonical	0	0	junction_4	5.7567782541773	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCGCGTGCTGTACCT	5038	False	NA	NA	False	ATTAAA	-14	NA	79896141	79910563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79896412_79898042_79898084_79899867_79899987_79902248_79902380_79903326_79903471_79903829_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122_79909442_79909820
ES.31201.6	chr7	+	4721	11	NNC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	19	-4	intron_retention	FALSE	canonical	0	0	junction_2	5.83180932472933	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	5039	False	NA	NA	False	ATTAAA	-16	NA	79896142	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79896412_79897031_79897326_79898042_79898084_79899867_79899987_79902248_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122_79909442_79909820
ES.31201.7	chr7	+	3717	13	NNC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_1	5.65869537378832	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	5062	False	NA	NA	False	ATTAAA	-16	NA	79896165	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79896346_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903417_79903471_79903829_79904451_79905087_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122
ES.31201.8	chr7	+	4493	11	NNC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_4	6.14491659829489	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCGTGCTGTACCTCC	5069	False	NA	NA	False	ATTAAA	-16	NA	79896172	79910565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79896412_79897031_79897300_79898042_79898084_79899867_79899987_79902159_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909127_79909442_79910076
ES.31201.9	chr7	+	4610	11	NIC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	28	-1	intron_retention	FALSE	canonical	1	1	junction_5	5.74804314527997	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGCTGTACCTCCTTT	5097	False	NA	NA	False	ATTAAA	-19	NA	79896200	79910568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79896412_79897031_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909122
ES.31202.1	chr7	-	127	1	Intergenic	novelGene_25647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAAATAAGAT	NA	False	NA	NA	False	NA	NA	NA	79896721	79896594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_79896600_79896700
ES.31203.1	chr7	+	1351	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	-18	-16	-18	16	multi-exon	FALSE	canonical	3	448	junction_2	14	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCTCGGCAGAATTTAC	NA	False	NA	29	True	AATAAA	-29	NA	79910944	79915138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79911172_79911568_79911680_79914125
ES.31203.10	chr7	+	3769	18	NNC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	-5	-2	intron_retention	FALSE	canonical	1	2	junction_8	40.8865423160305	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-19	NA	79919391	79941325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933707_79933825_79934031_79934110_79934289_79934364_79934765_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940313_79940862
ES.31203.11	chr7	+	2466	21	NIC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	38.8940548156142	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919398	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.12	chr7	+	3344	19	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_17	32.4687884316958	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTGTTTTTT	NA	False	NA	11	True	AATAAA	-15	NA	79919403	79941321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79939729_79939832_79940015
ES.31203.13	chr7	+	3238	21	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	7	-13	intron_retention	FALSE	canonical	3	97	junction_6	14.9715563653215	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTTCTCTCTCTCT	NA	False	NA	-4	True	NA	NA	NA	79919403	79941306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.14	chr7	+	2583	23	FSM	ENSMUSG00000030534.14	ENSMUST00000150585.8	2554	23	-23	-6	7	0	multi-exon	FALSE	canonical	3	10	junction_6	27.6695375058045	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919403	79941327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.15	chr7	+	2616	22	NNC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8065730692454	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919403	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934884_79935089_79935303_79935379_79935581_79935647_79935731_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.17	chr7	+	4054	19	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	8	0	intron_retention	FALSE	canonical	3	10	junction_6	29.7462519684891	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919404	79941327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79935379_79935581_79935647_79935758_79935814_79936855_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.18	chr7	+	4611	19	NIC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	11	2	intron_retention	FALSE	canonical	3	10	junction_5	30.1647738305281	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919407	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935647_79935758_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.19	chr7	+	3466	20	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	13	-2	intron_retention	FALSE	canonical	3	97	junction_6	15.3068340611333	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-19	NA	79919409	79941325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.2	chr7	+	1725	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	-14	-2	-9	2	multi-exon	FALSE	canonical	3	448	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTGGTTCTCTTC	NA	False	NA	15	True	AATAAA	-15	NA	79910953	79915124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79911680_79914125
ES.31203.20	chr7	+	2502	22	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-8	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	29.9596856866007	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919418	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.22	chr7	+	2565	23	NNC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	29.6781634948956	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919418	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929702_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.23	chr7	+	2527	23	NNC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	29.5094885986757	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTGTTTTTT	NA	False	NA	11	True	AATAAA	-15	NA	79919419	79941321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940074_79940195_79940313_79940862
ES.31203.24	chr7	+	3677	21	NIC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	10	junction_6	28.3256067896171	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTGTTTTTTGTTT	NA	False	NA	15	True	AATAAA	-19	NA	79919419	79941325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.26	chr7	+	3407	20	NNC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_4	31.8856162050481	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTGTTTTTT	NA	False	NA	11	True	AATAAA	-15	NA	79919420	79941321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925858_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.27	chr7	+	3035	22	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	-6	2	intron_retention	FALSE	canonical	3	97	junction_6	14.7824741484676	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919420	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.28	chr7	+	2790	21	NNC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_11	38.7738313814872	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919421	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934884_79935089_79935303_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.29	chr7	+	3039	22	NIC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	6	2	intron_retention	FALSE	canonical	3	10	junction_6	28.1672201370571	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919432	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.3	chr7	+	1084	1	NIC	ENSMUSG00000047084.9	novel	1317	3	NA	NA	-2	-3073	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGGATTTTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	79910965	79912049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79911000_79912000
ES.31203.30	chr7	+	2557	23	NNC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.0614173094396	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919443	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925858_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933707_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.31	chr7	+	2798	21	NNC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.6587601477233	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79919467	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79919828_79923976_79924058_79924371_79924434_79929719_79929782_79932232_79932736_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940869
ES.31203.32	chr7	+	4729	14	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	3811	0	intron_retention	FALSE	canonical	3	97	junction_1	15.4678517535507	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79927852	79941327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79940313_79940862
ES.31203.33	chr7	+	3508	18	NNC	ENSMUSG00000030534.14	novel	2554	23	NA	NA	4107	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	42.1041713571796	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79928148	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79939972_79940092_79940195_79940313_79940862
ES.31203.34	chr7	+	173	1	Intergenic	novelGene_25648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACCAGGCTGTCATA	NA	False	NA	NA	False	NA	NA	NA	79930309	79930482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_79930300_79930500
ES.31203.4	chr7	+	1201	2	NIC	ENSMUSG00000047084.9	novel	1709	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79910967	79915122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79911172_79914125
ES.31203.5	chr7	+	3004	25	Fusion	ENSMUSG00000047084.9_ENSMUSG00000030534.14	novel	420	6	NA	NA	1	0	multi-exon	FALSE	canonical	0	0	junction_3	99.001543197849	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79910968	79941327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_79911172_79911568_79911680_79914125_79914673_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.6	chr7	+	3535	24	Fusion	ENSMUSG00000047084.9_ENSMUSG00000030534.14	novel	420	6	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_2	89.7740284351464	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79910968	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_79911172_79911568_79911680_79914122_79914673_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935731_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.7	chr7	+	3092	2	NNC	ENSMUSG00000047084.9	novel	1709	2	NA	NA	184	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79911151	79915122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79911809_79912687
ES.31203.8	chr7	+	2203	23	Fusion	ENSMUSG00000047084.9_ENSMUSG00000030534.14	novel	420	6	NA	NA	3189	2	multi-exon	FALSE	canonical	0	0	junction_1	29.7660297810376	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTGTTTTTTGT	NA	False	NA	13	True	AATAAA	-17	NA	79914156	79941323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_79914221_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31203.9	chr7	+	2584	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	-10	0	-10	0	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919386	79941327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ES.31204.1	chr7	-	4065	3	Antisense	novelGene_ENSMUSG00000030534.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	79936842	79931482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_79932325_79933172_79933279_79933725
ES.31205.1	chr7	+	3150	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-71	-71	-16	66	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGAAGTTTCAAGAGT	NA	False	NA	84	True	ATTAAA	-25	NA	79944181	79966073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.11	chr7	+	1478	8	NNC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	357.689182140596	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944215	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956200_79965533
ES.31205.12	chr7	+	2902	14	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	1	10	junction_9	342.439317822198	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944215	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.14	chr7	+	4595	14	ISM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-37	-5	3	0	intron_retention	FALSE	canonical	3	316	junction_13	195.230284293512	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944215	79966007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274
ES.31205.15	chr7	+	2518	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	-37	527	3	143	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGATTAATGCTGTAG	NA	False	NA	NA	False	AATATA	-18	NA	79944215	79965475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.2	chr7	+	2960	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	-40	-8	-11	0	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944186	79966007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ES.31205.21	chr7	+	825	1	NIC	ENSMUSG00000038943.17	novel	3026	14	NA	NA	4	-9137	mono-exon	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	79944216	79945041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944200_79945000
ES.31205.22	chr7	+	2933	14	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_11	331.736795931877	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944216	79966002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79962779_79962957_79963274_79963317_79964861
ES.31205.25	chr7	+	3030	15	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	383.807329693598	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944220	79966002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954339_79954425_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.29	chr7	+	4677	15	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_12	379.329268416703	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944225	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962532_79962633_79962779_79962957_79963274
ES.31205.3	chr7	+	3037	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	-10	-1	-10	1	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTTGTCTTCAATGGT	NA	False	NA	19	True	AATAAA	-29	NA	79944187	79966008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ES.31205.31	chr7	+	2943	16	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	324.699587653299	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944225	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861_79965482_79965570
ES.31205.34	chr7	+	5392	15	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-1	2547	intron_retention	FALSE	non_canonical	0	0	junction_14	334.815186608483	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCAGTCCCCAGCTAA	NA	False	NA	NA	False	NA	NA	NA	79944225	79968554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861_79966287_79966439
ES.31205.37	chr7	+	4076	14	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	316	junction_12	241.158593990804	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944225	79966007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.39	chr7	+	6120	13	NIC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	387	junction_12	184.624393476774	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944226	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ES.31205.4	chr7	+	2944	14	NIC	ENSMUSG00000038943.17	novel	3016	14	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	301.176882899235	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944192	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962880_79964861
ES.31205.40	chr7	+	6230	14	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	346.916493200364	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944226	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959142_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.41	chr7	+	2663	14	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	342.994608959307	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944226	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954562_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.43	chr7	+	2800	13	NIC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	9	junction_11	310.330055031019	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTACACTGTTTTGT	NA	False	NA	9	True	AATAAA	-19	NA	79944226	79965998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79962779_79962880_79964861
ES.31205.46	chr7	+	2997	13	NIC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	387	junction_12	183.492109276303	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944227	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ES.31205.47	chr7	+	3030	15	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	335.991230752913	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944227	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959147_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ES.31205.48	chr7	+	2940	15	NNC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	367.711455200561	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944227	79966007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960838_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ES.31205.5	chr7	+	3062	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-5	66	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGAAGTTTCAAGAGT	NA	False	NA	84	True	ATTAAA	-25	NA	79944192	79966073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ES.31205.52	chr7	+	2943	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	358.619298170648	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944228	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ES.31205.53	chr7	+	2834	15	NNC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	301.013865027469	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944228	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861_79965689_79965764
ES.31205.54	chr7	+	4895	13	ISM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	2	-3	2	0	intron_retention	FALSE	canonical	3	885	junction_8	65.2002790552992	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944228	79966002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779
ES.31205.55	chr7	+	4835	11	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_4	312.522975155428	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944228	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954600_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779
ES.31205.58	chr7	+	6157	14	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	61	junction_12	298.554089536047	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTTTGTCTTCAAT	NA	False	NA	16	True	AATAAA	-26	NA	79944230	79966005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ES.31205.61	chr7	+	2892	14	NNC	ENSMUSG00000038943.17	novel	2912	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	311.511812725385	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944240	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79944340_79950048_79950182_79950784_79950902_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ES.31205.62	chr7	+	4703	11	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-2059	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	323.467772737873	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTTTGTCTTCAAT	NA	False	NA	16	True	AATAAA	-26	NA	79952082	79966005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
ES.31205.63	chr7	+	3831	11	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	-878	0	intron_retention	FALSE	canonical	3	385	junction_10	194.916392332713	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTTTTGTCTTCAAT	NA	False	NA	16	True	AATAAA	-26	NA	79953263	79966005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79963317_79964861
ES.31205.65	chr7	+	2424	11	ISM	ENSMUSG00000038943.17	ENSMUST00000047558.14	3016	14	10097	8	154	0	3prime_fragment	FALSE	canonical	3	21	junction_8	365.498084810304	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79954295	79965999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79964861
ES.31205.9	chr7	+	4531	14	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	3	1	intron_retention	FALSE	canonical	3	61	junction_13	260.501132889449	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTTTGTCTTCAATG	NA	False	NA	17	True	AATAAA	-27	NA	79944201	79966006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274
ES.31206.1	chr7	-	1628	7	NIC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-959	4787	intron_retention	FALSE	canonical	0	0	junction_1	17.3565549577098	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCTGTTGAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	79970804	79960550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79960821_79966611_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049
ES.31206.10	chr7	-	2941	5	NNC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	-1198	265	intron_retention	FALSE	non_canonical	0	0	junction_1	19.880895352071	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTGCACTTCGCCT	NA	False	NA	9	True	AGTAAA	-32	NA	79971043	79966078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79970930_79971024
ES.31206.11	chr7	-	1947	11	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-2	265	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.7622967869534	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTGCACTTCGCCT	NA	False	NA	9	True	AGTAAA	-32	NA	79973870	79966078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970447_79970609_79970930_79971024_79971092_79973497_79973618_79973812
ES.31206.12	chr7	-	3149	8	NNC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	-8	260	intron_retention	FALSE	non_canonical	0	0	junction_1	18.9586015156333	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAATCCTTTGCACTT	NA	False	NA	4	True	AGTAAA	-27	NA	79973909	79966083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79969962_79970049_79970930_79971024_79971092_79973497_79973618_79973776
ES.31206.13	chr7	-	3053	8	NNC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	15	256	intron_retention	FALSE	non_canonical	0	0	junction_1	17.6473389333512	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTCTAAATCCTTTGC	NA	False	NA	0	True	AGTAAA	-23	NA	79973853	79966087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79969962_79970049_79970930_79971024_79971092_79973497_79973618_79973812
ES.31206.14	chr7	-	2217	9	NNC	ENSMUSG00000038930.12	novel	2237	7	NA	NA	-3	250	intron_retention	FALSE	non_canonical	0	0	junction_1	17.3992636338438	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTGAAACTTCTAAATC	NA	False	NA	-6	True	AGTAAA	-17	NA	79973904	79966093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79970930_79971024_79971092_79973497_79973618_79973812
ES.31206.16	chr7	-	3098	7	NNC	ENSMUSG00000038930.12	novel	2237	7	NA	NA	26	248	intron_retention	FALSE	non_canonical	0	0	junction_1	17.9884222024427	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTTGAAACTTCTAAA	NA	False	NA	-8	True	AGTAAA	-15	NA	79973842	79966095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79970930_79971024_79971092_79973497
ES.31206.17	chr7	-	2169	10	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-13	248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4352490611667	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTTGAAACTTCTAAA	NA	False	NA	-8	True	AGTAAA	-15	NA	79973914	79966095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970447_79970609_79970930_79971024_79971092_79973497
ES.31206.18	chr7	-	1726	7	NNC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	-2	248	intron_retention	FALSE	non_canonical	0	0	junction_1	20.6512038928054	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTTGAAACTTCTAAA	NA	False	NA	-8	True	AGTAAA	-15	NA	79973870	79966095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966293_79966439_79966799_79967200_79967231_79968606_79969090_79969839_79969962_79970929_79971092_79973497
ES.31206.19	chr7	-	2313	9	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-2	248	intron_retention	TRUE	non_canonical	0	0	junction_1	17.4355957741627	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTTGAAACTTCTAAA	NA	False	NA	-8	True	AGTAAA	-15	NA	79973903	79966095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966439_79966799_79967200_79967225_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970930_79971024_79971092_79973497
ES.31206.2	chr7	-	4447	3	NNC	ENSMUSG00000038930.12	novel	246	2	NA	NA	-39	3110	intron_retention	FALSE	non_canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	79973940	79962227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79965261_79968118_79969090_79973497
ES.31206.21	chr7	-	1989	11	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	11	246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.135324645564	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACTCTTGAAACTTCTA	NA	False	NA	-10	True	AGTAAA	-13	NA	79974161	79966097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966439_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969876_79969962_79970049_79970447_79970609_79970930_79971024_79971092_79973497_79973618_79974003
ES.31206.22	chr7	-	2164	10	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-12	242	intron_retention	FALSE	non_canonical	0	0	junction_1	17.3916398249984	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGACTCTTGAAACT	NA	False	NA	-14	True	AGTAAA	-9	NA	79973913	79966101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966439_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970930_79971024_79971092_79973497_79973618_79973776
ES.31206.23	chr7	-	3099	7	NNC	ENSMUSG00000038930.12	novel	2237	7	NA	NA	14	237	intron_retention	FALSE	non_canonical	0	0	junction_1	17.9884222024427	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCTGAGACTCTTG	NA	False	NA	-19	True	AGTAAA	-4	NA	79973854	79966106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966295_79966445_79966799_79967200_79967231_79968606_79968775_79968993_79970930_79971024_79971092_79973497
ES.31206.24	chr7	-	1472	8	NIC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	15	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	17.0545343781982	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGCTTACAAGGCATG	NA	False	NA	NA	False	NA	NA	NA	79973853	79966485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970609_79970930_79971024_79971092_79973497
ES.31206.25	chr7	-	3417	5	NIC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	27	junction_3	8.8423695919137	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGACAAAGCTTACAAG	NA	False	NA	NA	False	NA	NA	NA	79974179	79966490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79966799_79967200_79967231_79968606_79969962_79970049_79971092_79973497
ES.31206.26	chr7	-	3417	5	NIC	ENSMUSG00000038930.12	novel	2595	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	38	junction_3	5.02493781056044	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGACAAAGCTTACAAG	NA	False	NA	NA	False	NA	NA	NA	79974186	79966490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79966799_79967200_79967231_79968606_79970930_79971024_79971092_79973497
ES.31206.27	chr7	-	4221	2	FSM	ENSMUSG00000038930.12	ENSMUST00000123189.2	638	2	-2	-3581	-2	-589	multi-exon	FALSE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAAACGCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	79973870	79967081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79970930_79973497
ES.31206.28	chr7	-	1269	1	NIC	ENSMUSG00000038930.12	novel	3367	9	NA	NA	-306	-1496	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATAATTA	NA	False	NA	NA	False	NA	NA	NA	79969257	79967988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79968000_79969300
ES.31206.29	chr7	-	1494	1	FSM	ENSMUSG00000038930.12	ENSMUST00000205863.2	1516	1	8	14	-1	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79973874	79972380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79972400_79973900
ES.31206.30	chr7	-	351	1	FSM	ENSMUSG00000038930.12	ENSMUST00000205863.2	1516	1	12	1153	-2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCTCTGAAACC	NA	False	NA	NA	False	AATAAA	-27	NA	79973870	79973519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79973500_79973900
ES.31206.4	chr7	-	6208	9	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-21	3110	intron_retention	TRUE	non_canonical	0	0	junction_1	15.9838785968863	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	79973922	79962227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049_79970930_79971024_79971092_79973497
ES.31206.5	chr7	-	4136	7	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	15	1856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3183541161653	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGAATTCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79973853	79963481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966287_79966437_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79970609_79970930_79973497
ES.31206.6	chr7	-	4720	2	NNC	ENSMUSG00000038930.12	novel	681	3	NA	NA	-130	1125	intron_retention	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCGGTCTGCTATTGA	NA	False	NA	NA	False	AAAAAG	-5	NA	79969081	79964212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966291_79966439
ES.31206.8	chr7	-	915	7	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	-283	-16	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	13.3499895963339	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATTAAAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	79970128	79965353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79965587_79966611_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79969962_79970049
ES.31206.9	chr7	-	2600	8	NNC	ENSMUSG00000038930.12	novel	3336	9	NA	NA	15	490	intron_retention	TRUE	non_canonical	0	0	junction_1	17.0545343781982	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATGGGTTTGGAGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	79973853	79965853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79966288_79966439_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79970930_79971024_79971092_79973497
ES.31207.1	chr7	-	3336	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	-73	-3	-73	0	multi-exon	FALSE	canonical	3	61	junction_19	11.9833679753749	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79990040	79975039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ES.31207.10	chr7	-	3149	20	NNC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	199	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	21.8903082565748	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989697	79975043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989464_79989659
ES.31207.11	chr7	-	3339	18	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_5	22.7265982913456	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989913	79975043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978440_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ES.31207.2	chr7	-	3279	20	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79990028	79975039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
ES.31207.3	chr7	-	4178	17	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	61	junction_16	12.1910251312185	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79989945	79975039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79978569_79978769_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ES.31207.4	chr7	-	3399	19	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	2	0	intron_retention	TRUE	canonical	3	31	junction_18	16.453826152653	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79989947	79975039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
ES.31207.5	chr7	-	3176	19	NIC	ENSMUSG00000030533.17	novel	3932	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.3457676827925	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	79989947	79975039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ES.31207.6	chr7	-	3495	19	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	-1	0	intron_retention	FALSE	canonical	3	31	junction_18	15.7452716790443	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGTTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	79989950	79975042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79989099_79989298_79989461_79989861
ES.31207.7	chr7	-	3908	19	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	-305	0	intron_retention	FALSE	canonical	3	61	junction_18	12.3107902084129	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGTTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	79990272	79975042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ES.31207.9	chr7	-	3359	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_17	19.6795660155288	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGTTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	79989923	79975042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988908_79989061_79989099_79989298_79989461_79989816
ES.31208.1	chr7	+	898	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	-3	615	-3	-3	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTTCTTCCTTCT	NA	False	NA	14	True	AATAAA	-19	NA	79992848	79995847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ES.31208.2	chr7	+	1514	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	-1	-3	-1	3	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGCTTCTTAAATCTCA	NA	False	NA	NA	False	AATAAA	-24	NA	79992850	79996465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ES.31208.3	chr7	+	1164	3	NIC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	0	-3	intron_retention	FALSE	canonical	3	114	junction_1	7.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTTCTTCCTTCT	NA	False	NA	14	True	AATAAA	-19	NA	79992871	79995847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79993343_79993463_79993705_79995395
ES.31208.4	chr7	+	788	4	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53.8041716680862	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTGCTGTTCTTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	79992881	79995845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79992998_79993286_79993343_79993538_79993705_79995395
ES.31208.5	chr7	+	1010	4	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	46.7784375778224	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTTCTTCCTTCT	NA	False	NA	14	True	AATAAA	-19	NA	79992883	79995847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79992998_79993286_79993343_79993463_79993705_79995248
ES.31208.6	chr7	+	1211	4	NNC	ENSMUSG00000030532.7	novel	772	4	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	50.2062413118794	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGCTGTTCTTCCTTC	NA	False	NA	13	True	AATAAA	-18	NA	79992887	79995846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79993204_79993286_79993343_79993463_79993705_79995248
ES.31208.7	chr7	+	2456	5	NNC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-4	4681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.8843076914126	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAAACAGCCAACTCT	NA	False	NA	NA	False	NA	NA	NA	79992887	80004976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_79992998_79993286_79993343_79993463_79993834_79995216_79996792_80004631
ES.31208.8	chr7	+	1672	4	NIC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.8537113133554	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTCCAGAAGGCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	79992888	79996455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79993204_79993286_79993343_79993463_79993705_79995395
ES.31208.9	chr7	+	1064	4	NIC	ENSMUSG00000030532.7	novel	1510	4	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.8537113133554	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTGTTCTTCCTTCT	NA	False	NA	14	True	AATAAA	-19	NA	79992888	79995847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_79993204_79993286_79993343_79993463_79993705_79995395
ES.31209.1	chr7	+	179	1	Intergenic	novelGene_25650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCTATACTATCT	666	False	NA	NA	False	NA	NA	NA	80014881	80015060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80014900_80015100
ES.3121.1	chr10	+	181	1	Intergenic	novelGene_2448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAGAAGAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	75632178	75632359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75632200_75632400
ES.31210.1	chr7	-	6391	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	120	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.4058697612111	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCAGTGAAGTTACTT	4121	False	NA	1	True	AATAAA	-22	NA	80021003	79998842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999237_79999281_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.10	chr7	-	4959	18	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	-3259	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.6913122302963	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTGCAGTGAAGTTAC	8445	False	NA	-1	True	AATAAA	-20	NA	80016679	79998844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999265_80001600_80002673_80002782_80002909_80003111_80005735_80005811_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616
ES.31210.12	chr7	-	6403	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6483321194469	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTGCAGTGAAGTTAC	4135	False	NA	-1	True	AATAAA	-20	NA	80020989	79998844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80001600_80002678_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008753_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019521_80020479_80020678_80020849
ES.31210.13	chr7	-	6380	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.307112792576	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTGCAGTGAAGTTAC	4094	False	NA	-1	True	AATAAA	-20	NA	80021030	79998844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008753_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.14	chr7	-	6535	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	107	0	intron_retention	FALSE	non_canonical	0	0	junction_1	18.7564229704521	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTGCAGTGAAGTTAC	4108	False	NA	-1	True	AATAAA	-20	NA	80021016	79998844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.15	chr7	-	5176	18	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	3048	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1355814390843	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGTGCAGTGAAGTTA	7566	False	NA	-2	True	AATAAA	-19	NA	80017558	79998845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999265_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008148_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444
ES.31210.16	chr7	-	7560	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	24.2728659759063	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGTGCAGTGAAGTTA	4016	False	NA	-2	True	AATAAA	-19	NA	80021108	79998845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001505_80002678_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009505_80010643_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.19	chr7	-	6486	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	49	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.8604823103931	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGTGCAGTGAAGTTA	4050	False	NA	-2	True	AATAAA	-19	NA	80021074	79998845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999223_79999265_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009532_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.2	chr7	-	6522	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	45	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4540448789189	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCAGTGAAGTTACTT	4046	False	NA	1	True	AATAAA	-22	NA	80021078	79998842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999265_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012124_80012212_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.22	chr7	-	6524	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	29	1	29	-1	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGTGCAGTGAAGTTA	4030	False	NA	-2	True	AATAAA	-19	NA	80021094	79998845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.24	chr7	-	6457	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	77	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.4058697612111	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATGTGCAGTGAAGT	4078	False	NA	-4	True	AATAAA	-17	NA	80021046	79998847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999265_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019521_80020479_80020678_80020849
ES.31210.26	chr7	-	7439	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	51	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	18.5278618171679	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATGTGCAGTGAAGT	4052	False	NA	-4	True	AATAAA	-17	NA	80021072	79998847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80020678_80020854
ES.31210.28	chr7	-	6596	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.4058697612111	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATGTGCAGTGAAGT	4022	False	NA	-4	True	AATAAA	-17	NA	80021102	79998847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019602_80020479_80020678_80020849
ES.31210.3	chr7	-	6448	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	70	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.4058697612111	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCAGTGAAGTTACTT	4071	False	NA	1	True	AATAAA	-22	NA	80021053	79998842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020475_80020678_80020849
ES.31210.32	chr7	-	1854	2	NNC	ENSMUSG00000038886.11	novel	4610	13	NA	NA	8744	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAGAGATGTGCAGTGA	NA	False	NA	-7	True	AATAAA	-14	NA	80000749	79998850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999230_79999274
ES.31210.34	chr7	-	6447	25	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.4514956743502	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTCAGAGATGTGCAGT	4025	False	NA	-9	True	AATAAA	-12	NA	80021099	79998852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020645_80020849
ES.31210.35	chr7	-	5891	22	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	66	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.4819441136619	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTCAGAGATGTGCAGT	4067	False	NA	-9	True	AATAAA	-12	NA	80021057	79998852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999239_79999281_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008746_80012071_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.36	chr7	-	5669	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	139	746	-110	-746	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTCCTGAGTTCT	4140	False	NA	NA	False	NA	NA	NA	80020984	79999590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.37	chr7	-	5214	24	NIC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	-124	928	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	14.6847142211905	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGTTGGACACTTTCT	4126	False	NA	NA	False	CATAAA	-16	NA	80020998	80000086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019521_80020479_80020678_80020849
ES.31210.38	chr7	-	5256	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	55	1243	55	927	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGAGGTTGGACACTTTC	4056	False	NA	NA	False	CATAAA	-15	NA	80021068	80000087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.39	chr7	-	5268	23	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	95	854	intron_retention	FALSE	canonical	0	0	junction_14	19.1747617352421	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGGCATTCTGTGAGTT	4096	False	NA	NA	False	AAGAAA	-15	NA	80021028	80000160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013418_80013675_80013849_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.41	chr7	-	5158	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	51	1345	51	825	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTACCTAAGAAACCTGT	4052	False	NA	NA	False	TTTAAA	-6	NA	80021072	80000189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.42	chr7	-	5179	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	58	822	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	14.6847142211905	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAGCTACCTAAGAAACC	4059	False	NA	NA	False	TTTAAA	-3	NA	80021065	80000192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019521_80020475_80020678_80020849
ES.31210.43	chr7	-	6072	23	NIC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	119	821	intron_retention	FALSE	canonical	3	45	junction_18	8.25885450204509	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAAGCTACCTAAGAAAC	4120	False	NA	NA	False	TTTAAA	-2	NA	80021004	80000193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80020678_80020849
ES.31210.44	chr7	-	4941	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	34	1579	34	591	multi-exon	FALSE	canonical	0	0	junction_22	14.6847142211905	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTGGTAAAAGCAAAGTT	4035	False	NA	NA	False	TATAAA	-7	NA	80021089	80000423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.45	chr7	-	5381	22	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	-105	74	intron_retention	FALSE	canonical	0	0	junction_18	15.028770594371	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGCTGCTTTCTGCTC	4145	False	NA	NA	False	AGTAAA	-39	NA	80020979	80000940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017482_80017961_80018134_80018253_80018399_80018467_80018726_80019340
ES.31210.46	chr7	-	5622	23	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	15	62	intron_retention	FALSE	canonical	0	0	junction_21	18.465513981787	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCCTAAAGGCTTTGC	4016	False	NA	NA	False	AGTAAA	-27	NA	80021108	80000952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009532_80010643_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.47	chr7	-	4576	23	ISM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	42	2108	42	62	intron_retention	FALSE	canonical	0	0	junction_22	14.9472903097286	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCCTAAAGGCTTTGC	4043	False	NA	NA	False	AGTAAA	-27	NA	80021081	80000952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479
ES.31210.48	chr7	-	175	1	Intergenic	novelGene_25649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTACAAGGG	NA	False	NA	NA	False	NA	NA	NA	80004635	80004460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80004500_80004600
ES.31210.49	chr7	-	4534	7	ISM	ENSMUSG00000038886.11	ENSMUST00000205535.2	4020	15	-434	4915	-185	-2701	intron_retention	FALSE	canonical	3	45	junction_3	6.48074069840786	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCAATGACTCGCTATA	3816	False	NA	NA	False	NA	NA	NA	80021308	80015114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340
ES.31210.6	chr7	-	6587	24	NNC	ENSMUSG00000038886.11	novel	6554	24	NA	NA	48	1	intron_retention	FALSE	non_canonical	0	0	junction_1	21.7924563351425	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGCAGTGAAGTTACT	4049	False	NA	0	True	AATAAA	-21	NA	80021075	79998843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009532_80010676_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ES.31210.8	chr7	-	1224	3	NNC	ENSMUSG00000038886.11	novel	4610	13	NA	NA	9267	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGCAGTGAAGTTACT	NA	False	NA	0	True	AATAAA	-21	NA	80000226	79998843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_79999222_79999263_79999653_79999769
ES.31211.1	chr7	+	173	1	Antisense	novelGene_ENSMUSG00000053158.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAACCACTCT	297	False	NA	NA	False	NA	NA	NA	80027905	80028078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_80027900_80028100
ES.31212.1	chr7	-	2268	16	ISM	ENSMUSG00000053158.11	ENSMUST00000080932.8	2762	19	3645	2	3118	-2	3prime_fragment	FALSE	canonical	1	2	junction_11	4.93693562175296	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATATTGACATGTGTGC	NA	False	NA	-6	True	AATAAA	-18	NA	80034049	80027507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938
ES.31212.2	chr7	-	1412	10	NIC	ENSMUSG00000053158.11	novel	2762	19	NA	NA	-2301	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	5.07718207057594	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATATTGACATGTGTGC	NA	False	NA	-6	True	AATAAA	-18	NA	80032485	80027507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268
ES.31212.4	chr7	-	3055	17	NIC	ENSMUSG00000053158.11	novel	2890	18	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_14	5.48257181895504	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTGATATTGACATGTG	NA	False	NA	-9	True	AATAAA	-15	NA	80037656	80027510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030641_80030912_80031036_80032060_80032180_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036558_80036733_80036869_80037092_80037584
ES.31212.5	chr7	-	2792	15	NIC	ENSMUSG00000053158.11	novel	2762	19	NA	NA	2903	0	intron_retention	FALSE	canonical	1	2	junction_10	5.09100848034442	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGTGATATTGACATGT	NA	False	NA	-10	True	AATAAA	-14	NA	80034264	80027511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938
ES.31213.1	chr7	+	176	1	Antisense	novelGene_ENSMUSG00000030530.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGCCACTTCTGGCTC	6862	False	NA	NA	False	NA	NA	NA	80047112	80047288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_80047100_80047300
ES.31214.1	chr7	-	4447	17	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	33.3850640256987	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGTCTCCAGTGTCTATA	3673	False	NA	1	True	ATTAAA	-23	NA	80052516	80038940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045286_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80048909_80049034_80052277
ES.31214.10	chr7	-	4220	16	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	23.9684978438134	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGTCTCCAGTGTCT	3658	False	NA	-2	True	ATTAAA	-20	NA	80052531	80038943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045171_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.14	chr7	-	3527	17	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.4399998666809	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGCCCGGTCTCCAG	3647	False	NA	-7	True	ATTAAA	-15	NA	80052542	80038948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80039617_80040400_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.15	chr7	-	4560	5	NNC	ENSMUSG00000030530.16	novel	2778	4	NA	NA	-21	2125	intron_retention	TRUE	non_canonical	0	0	junction_1	26.1474186106392	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATACTGACGGGATCACC	3658	False	NA	NA	False	NA	NA	NA	80052531	80043622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80044149_80044395_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.16	chr7	-	166	1	Intergenic	novelGene_25651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80044394	80044228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80044200_80044400
ES.31214.2	chr7	-	4620	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	-334	0	226	0	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3345	False	NA	0	True	ATTAAA	-22	NA	80052844	80038941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.3	chr7	-	4417	17	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.2724272994229	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3676	False	NA	0	True	ATTAAA	-22	NA	80052513	80038941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80048909_80049038_80052277
ES.31214.4	chr7	-	4621	16	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	23.0443051533345	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	4043	False	NA	0	True	ATTAAA	-22	NA	80052146	80038941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80051578
ES.31214.5	chr7	-	4376	16	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	23.5660773146487	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3619	False	NA	0	True	ATTAAA	-22	NA	80052570	80038941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045286_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.6	chr7	-	4073	17	NNC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-360	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.8264608259495	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	4374	False	NA	0	True	ATTAAA	-22	NA	80051815	80038941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80040143_80040359_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80051578
ES.31214.8	chr7	-	5313	13	NIC	ENSMUSG00000030530.16	novel	4286	16	NA	NA	-44	0	intron_retention	FALSE	canonical	3	55	junction_12	15.4620952295893	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGTCTCCAGTGTCT	3635	False	NA	-2	True	ATTAAA	-20	NA	80052554	80038943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80041045_80041255_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80043370_80045082_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ES.31214.9	chr7	-	4977	15	NNC	ENSMUSG00000030530.16	novel	4332	16	NA	NA	-49	0	intron_retention	FALSE	canonical	0	0	junction_3	29.3542751466929	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGTCTCCAGTGTCT	3630	False	NA	-2	True	ATTAAA	-20	NA	80052559	80038943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80041045_80041255_80041367_80041475_80041601_80042092_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80051578
ES.31215.1	chr7	-	1785	1	Intergenic	novelGene_25652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	9597	False	NA	NA	False	NA	NA	NA	80104392	80102607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80102600_80104400
ES.31216.1	chr7	+	156	1	Intergenic	novelGene_25653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80124533	80124689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80124500_80124700
ES.31217.1	chr7	+	3105	1	Intergenic	novelGene_25657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80173974	80177079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80174000_80177100
ES.31217.2	chr7	+	2003	1	Intergenic	novelGene_25656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAAGAAGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	80173974	80175977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80174000_80176000
ES.31218.1	chr7	-	7465	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-18	28	intron_retention	FALSE	canonical	3	335	junction_5	42.2073453322997	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTAACAATTGTAGCAA	NA	False	NA	-5	True	NA	NA	NA	80184885	80104811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.11	chr7	-	4264	2	FSM	ENSMUSG00000030528.13	ENSMUST00000206948.2	485	2	-3477	-302	1147	1	multi-exon	FALSE	canonical	3	415	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	2846	False	NA	-32	True	AATAAA	-23	NA	80112478	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80105185_80108560
ES.31218.13	chr7	-	4296	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	97.2438172841852	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	-32	True	AATAAA	-23	NA	80184855	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.14	chr7	-	4290	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	96.1730081675727	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	-32	True	AATAAA	-23	NA	80184853	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.16	chr7	-	4341	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	45	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.3101801143098	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	-32	True	AATAAA	-23	NA	80184822	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110566_80113599_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.17	chr7	-	4576	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	122.315411610129	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	-32	True	AATAAA	-23	NA	80184882	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143341_80143403_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.19	chr7	-	4518	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.3101801143098	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184852	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113486_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.2	chr7	-	4549	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	-25	74	-25	25	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCTGTAACAATTGTAG	NA	False	NA	-8	True	NA	NA	NA	80184892	80104814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.20	chr7	-	3001	16	NNC	ENSMUSG00000030528.13	novel	4770	22	NA	NA	11859	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.011947292601	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80152581	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143341_80143403_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030
ES.31218.22	chr7	-	4564	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	95.6816575516788	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184851	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114767_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.23	chr7	-	6716	20	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-13	0	intron_retention	FALSE	canonical	3	7	junction_18	99.5939401198048	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184880	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80164336_80164439_80184790
ES.31218.26	chr7	-	4538	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.15723777115	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184853	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110389_80110566_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.27	chr7	-	4306	21	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.677802335973	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184877	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110484_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.29	chr7	-	7358	21	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	14	0	intron_retention	FALSE	canonical	1	1	junction_5	97.7	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184853	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80113714_80114485_80114686_80116522_80116662_80119384_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.31	chr7	-	4640	21	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_11	98.0955019356137	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184822	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80144280_80145733_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.32	chr7	-	7703	24	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_10	172.467569072717	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184822	80104839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80142141_80142279_80143341_80143403_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80165942_80166074_80184790
ES.31218.33	chr7	-	4575	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	124.126002363767	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184854	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80126844_80126935_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.34	chr7	-	3797	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_19	97.0775334462099	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184882	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80164336_80164439_80184790
ES.31218.35	chr7	-	4365	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	19	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	98.1552851353405	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184848	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.36	chr7	-	4323	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	95.8741883929142	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184885	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.37	chr7	-	4564	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	122.679418279602	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184883	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80109544_80109595_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.38	chr7	-	6241	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	335	junction_5	40.5450366876144	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTAGTGGCCATTGTT	NA	False	NA	-34	True	AATAAA	-21	NA	80184877	80104840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.39	chr7	-	4586	22	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	17	junction_2	91.6133796880591	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184868	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80105185_80108560_80108745_80110389_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.4	chr7	-	4385	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	18	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	146.149397051453	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAGAGCATCTGTAACA	NA	False	NA	-15	True	AATAAA	-40	NA	80184849	80104821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80174934_80175014_80184790
ES.31218.40	chr7	-	4446	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.8914883317947	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184823	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110484_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.43	chr7	-	5811	21	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	2	junction_10	98.025749168267	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184882	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143851_80143999_80144180_80144280_80145737_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.44	chr7	-	4443	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.3101801143098	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184848	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110566_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.45	chr7	-	3980	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	96.1331512353564	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184831	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80163007_80163243_80164336_80164439_80184790
ES.31218.46	chr7	-	4301	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	95.6816575516788	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184833	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114524_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.47	chr7	-	4640	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	122.590504600405	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184873	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80142141_80142279_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.48	chr7	-	4695	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.826599967471	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATGTAGTGGCCATTGT	NA	False	NA	-35	True	AATAAA	-20	NA	80184853	80104841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80115298_80115511_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.49	chr7	-	4299	21	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.6700574117963	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACATGTAGTGGCCATT	NA	False	NA	-37	True	AATAAA	-18	NA	80184899	80104843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110566_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.5	chr7	-	4348	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	46	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	95.5468566414351	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTCTCAGAGCATCT	NA	False	NA	-21	True	AATAAA	-34	NA	80184821	80104827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116556_80119348_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.50	chr7	-	4360	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.3101801143098	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACATGTAGTGGCCAT	NA	False	NA	-38	True	AATAAA	-17	NA	80184812	80104844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113599_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.51	chr7	-	4461	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	126.059284904594	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACATGTAGTGGCCAT	NA	False	NA	-38	True	AATAAA	-17	NA	80184883	80104844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119384_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143851_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.53	chr7	-	4546	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.8914883317947	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCACATGTAGTGGCCA	NA	False	NA	-39	True	AATAAA	-16	NA	80184854	80104845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108811_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.54	chr7	-	4317	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	19	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	124.825392788516	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCACATGTAGTGGCC	NA	False	NA	-40	True	AATAAA	-15	NA	80184848	80104846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123437_80123478_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.57	chr7	-	9920	19	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	12	-336	intron_retention	FALSE	non_canonical	0	0	junction_2	131.035724560561	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGAGGTCTTCACTTC	NA	False	NA	NA	False	NA	NA	NA	80184855	80105504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80108745_80110477_80113712_80114485_80114686_80116522_80116662_80119337_80119529_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.58	chr7	-	5227	21	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	34	2713	34	-2285	5prime_fragment	FALSE	canonical	3	335	junction_5	42.4421959846566	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAACTTTGTGGTTTTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	80184833	80107453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.59	chr7	-	4452	22	NNC	ENSMUSG00000030528.13	novel	3581	15	NA	NA	-18	-2287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.1392838789738	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTAACTTTGTGGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	80184885	80107455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80107736_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.6	chr7	-	4593	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-4	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	123.603672148505	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTTTCTCAGAGCATC	NA	False	NA	-22	True	AATAAA	-33	NA	80184871	80104828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80174934_80175014_80184790
ES.31218.60	chr7	-	3283	15	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	11	18866	11	279	5prime_fragment	FALSE	canonical	3	354	junction_11	34.4827670654458	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCATGTGATGCTGAC	NA	False	NA	NA	False	TATAAA	-20	NA	80184856	80123606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.61	chr7	-	2148	1	Intergenic	novelGene_25654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80133975	80131827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80131800_80134000
ES.31218.62	chr7	-	173	1	Intergenic	novelGene_25655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTATTATCACTATGT	NA	False	NA	NA	False	NA	NA	NA	80139764	80139591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80139600_80139800
ES.31218.63	chr7	-	3379	13	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	24	-18774	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	109.230992498568	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTTGTTTCTAGAAA	NA	False	NA	NA	False	AATAAA	-11	NA	80184843	80142659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80143403_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.64	chr7	-	3553	9	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	38	41119	38	-21974	5prime_fragment	FALSE	canonical	3	354	junction_5	28.2220547621891	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTAGATTCCAGCTACA	NA	False	NA	NA	False	AATAAA	-23	NA	80184829	80145859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.65	chr7	-	3467	9	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	8	-22092	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	131.987688819829	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTGAGGTATTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	80184859	80145977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159314_80162526_80163243_80164336_80164439_80184790
ES.31218.66	chr7	-	2460	7	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	-19	46836	-19	-27691	5prime_fragment	FALSE	canonical	3	354	junction_3	21.7364261603011	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGTTGTGGAATCAGAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	80184886	80151576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.7	chr7	-	4588	23	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	144.727929418337	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTGGCCATTGTTTCT	NA	False	NA	-31	True	AATAAA	-24	NA	80184852	80104837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80110477_80110566_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80142141_80142279_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31218.8	chr7	-	7514	1	NIC	ENSMUSG00000030528.13	novel	993	3	NA	NA	1274	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTGGCCATTGTTTCT	2973	False	NA	-31	True	AATAAA	-24	NA	80112351	80104837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80104800_80112400
ES.31218.9	chr7	-	6067	22	NNC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.8914883317947	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGGCCATTGTTTC	NA	False	NA	-32	True	AATAAA	-23	NA	80184880	80104838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80105185_80108560_80108745_80108923_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ES.31219.1	chr7	+	180	1	Intergenic	novelGene_25658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAATTTAATTAA	8355	False	NA	NA	False	NA	NA	NA	80195275	80195455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80195300_80195500
ES.3122.1	chr10	-	1044	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	-10	3	-10	-3	multi-exon	FALSE	canonical	1	1	junction_4	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTCCGTGTTGTTTC	9566	False	NA	NA	False	AATAAA	-21	NA	75634428	75619649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
ES.31220.1	chr7	+	189	1	Intergenic	novelGene_25659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGAGTTC	4245	False	NA	NA	False	NA	NA	NA	80202841	80203030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80202800_80203000
ES.31221.1	chr7	+	177	1	Intergenic	novelGene_25663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACATTGAAA	NA	False	NA	NA	False	NA	NA	NA	80422132	80422309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80422100_80422300
ES.31222.1	chr7	+	3683	1	Antisense	novelGene_ENSMUSG00000030536.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATGCTATGTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	80447315	80450998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_80447300_80451000
ES.31223.1	chr7	-	5171	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-56	0	-56	0	multi-exon	TRUE	canonical	0	0	junction_3	5.85757838102026	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTGTTTCTCTTCAGC	1541	False	NA	NA	False	ATTAAA	-26	NA	80338681	80236374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ES.31223.10	chr7	-	174	1	Intergenic	novelGene_25662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	80355722	80355548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80355500_80355700
ES.31223.100	chr7	-	3694	14	FSM	ENSMUSG00000030536.11	ENSMUST00000206149.2	3629	14	-44	-21	-26	21	multi-exon	FALSE	canonical	3	539	junction_13	45.145261928094	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGACTTCTCTTCCGAA	NA	False	NA	NA	False	NA	NA	NA	80453055	80399103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.101	chr7	-	3574	1	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-9078	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	661	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAACCCAAAAAAAAAAAA	7506	False	NA	NA	False	NA	NA	NA	80402706	80399132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80399100_80402700
ES.31223.102	chr7	-	4073	13	NIC	ENSMUSG00000030536.11	novel	3629	14	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	539	junction_12	46.862313097935	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAACCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80453045	80399132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.103	chr7	-	175	1	Intergenic	novelGene_25664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCCATAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	80430969	80430794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80430800_80431000
ES.31223.104	chr7	-	6744	1	Intergenic	novelGene_25665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGGGTGTTGTTCAAT	NA	False	NA	NA	False	NA	NA	NA	80442611	80435867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80435900_80442600
ES.31223.11	chr7	-	8186	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	136	-878	1	878	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGGGAAATGGCTCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	80453028	80360452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.12	chr7	-	7419	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	34	-9	34	9	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTTATTGTTA	NA	False	NA	0	True	AATAAA	-28	NA	80453130	80361321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.14	chr7	-	7261	37	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	20983	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	117.473112237505	977	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTTGGTTTTATTGT	NA	False	NA	-2	True	AATAAA	-26	NA	80432028	80361323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80431842
ES.31223.19	chr7	-	7314	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	116.114254455063	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453040	80361330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402096_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.2	chr7	-	5016	14	NIC	ENSMUSG00000030527.16	novel	5115	15	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	6.74997260568625	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGCTCTCGGTGTTTCT	1588	False	NA	NA	False	ATTAAA	-19	NA	80338634	80236381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ES.31223.20	chr7	-	7341	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.619413714968	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453028	80361330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388686_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.23	chr7	-	5498	24	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-5012	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	143.034081890403	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	7706	False	NA	-9	True	AATAAA	-19	NA	80398640	80361330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376572_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571
ES.31223.24	chr7	-	8063	37	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_19	117.808342470114	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453057	80361330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388939_80389537_80389709_80392783_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.25	chr7	-	7353	39	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-65	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_38	149.871729550838	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTATTTTTCTTGGT	NA	False	NA	-10	True	AATAAA	-18	NA	80466632	80361331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80458795_80458863_80466513
ES.31223.30	chr7	-	7195	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	116.391219587554	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453028	80361332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389598_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.33	chr7	-	7407	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	116.587840774707	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453033	80361332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388324_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.34	chr7	-	7578	37	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	2	-2	intron_retention	FALSE	canonical	3	539	junction_36	56.5491155468925	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453009	80361332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.39	chr7	-	7297	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	116.619413714968	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453053	80361332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375747_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.4	chr7	-	3604	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-26	1537	-26	-1537	multi-exon	FALSE	canonical	0	0	junction_3	5.85757838102026	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCCTGGTTCATGGGAC	1571	False	NA	NA	False	NA	NA	NA	80338651	80237911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ES.31223.40	chr7	-	7296	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	153.227021401759	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATTTTTCTTGG	NA	False	NA	-11	True	AATAAA	-17	NA	80453040	80361332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387859_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401773_80401956_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.43	chr7	-	7364	39	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-11	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	151.108656857525	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTATTTTTCTT	NA	False	NA	-13	True	AATAAA	-15	NA	80453040	80361334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379391_80379440_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.44	chr7	-	7316	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	178.198135800097	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTATTTTTCTT	NA	False	NA	-13	True	AATAAA	-15	NA	80453024	80361334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370735_80372689_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385381_80386005_80386166_80387859_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.45	chr7	-	7415	39	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-42	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_38	149.871729550838	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTATTTTTCTT	NA	False	NA	-13	True	AATAAA	-15	NA	80475764	80361334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80458795_80458863_80475580
ES.31223.46	chr7	-	6254	29	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-13644	-4	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_28	128.092142377179	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTATTTTTCTT	2940	False	NA	-13	True	AATAAA	-15	NA	80407272	80361334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406004_80407151
ES.31223.48	chr7	-	7293	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.619413714968	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTGTTTATTTTTCT	NA	False	NA	-14	True	AATAAA	-14	NA	80453024	80361335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388647_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.5	chr7	-	3399	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-11	1727	-11	-1727	multi-exon	FALSE	canonical	0	0	junction_3	5.85757838102026	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAAGGCCTGGCTGG	1586	False	NA	NA	False	AATAGA	-19	NA	80338636	80238101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ES.31223.50	chr7	-	7354	38	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	4005	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	115.945032441434	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGTGTTTATTTTTC	NA	False	NA	-15	True	AATAAA	-13	NA	80471717	80361336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80471525
ES.31223.6	chr7	-	3591	6	ISM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	-30	26993	-30	4487	5prime_fragment	FALSE	canonical	2	12	junction_3	3.6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGGTTTTTATAGTTT	1567	False	NA	NA	False	NA	NA	NA	80338655	80263367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ES.31223.61	chr7	-	5781	26	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-8047	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	137.203790035115	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGTGTTTATTTTTC	8537	False	NA	-15	True	AATAAA	-13	NA	80401675	80361336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385229_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616
ES.31223.62	chr7	-	7319	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	115.353732339468	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGTGTTTATTTTTC	NA	False	NA	-15	True	AATAAA	-13	NA	80453053	80361336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366860_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.63	chr7	-	7413	40	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-29	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	175.800272184651	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGTGTTTATTTTTC	NA	False	NA	-15	True	AATAAA	-13	NA	80466596	80361336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80458795_80458863_80465219_80465321_80466513
ES.31223.65	chr7	-	4807	24	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	54543	690	-4993	-690	3prime_fragment	FALSE	canonical	3	559	junction_21	58.7183530980579	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGTTACAACCCTCAT	7725	False	NA	32	True	NA	NA	NA	80398621	80362020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571
ES.31223.66	chr7	-	6280	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	91	1073	-44	-1073	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAAAGGCCAATAAGCT	NA	False	NA	NA	False	ATTAAA	-26	NA	80453073	80362403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.68	chr7	-	6159	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	92	1193	-43	-1193	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTTATTCAAAAAGATA	NA	False	NA	NA	False	ATTAAA	-24	NA	80453072	80362523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.69	chr7	-	4878	28	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-13673	-1193	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	132.469713390293	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTTATTCAAAAAGATA	2911	False	NA	NA	False	ATTAAA	-24	NA	80407301	80362523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151
ES.31223.7	chr7	-	132	1	Intergenic	novelGene_25660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80274259	80274127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80274100_80274300
ES.31223.78	chr7	-	7105	37	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-16	-1205	intron_retention	FALSE	canonical	0	0	junction_19	117.873166298922	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAATCTCTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	80453045	80362535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389707_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.8	chr7	-	4089	14	NNC	ENSMUSG00000030536.11	novel	3629	14	NA	NA	-9	61956	intron_retention	TRUE	non_canonical	0	0	junction_1	169.030510883294	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAACCAACCACAACA	NA	False	NA	NA	False	NA	NA	NA	80453038	80299374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80299503_80399237_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.80	chr7	-	5931	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	89	1424	-46	-1424	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTATATCTGAATTC	NA	False	NA	49	True	NA	NA	NA	80453075	80362754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.85	chr7	-	5825	39	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-37	-1501	combination_of_known_junctions	FALSE	canonical	0	0	junction_38	149.871729550838	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGTAATAGGAATTTTA	NA	False	NA	-28	True	TATAAA	-15	NA	80466604	80362831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80458795_80458863_80466513
ES.31223.87	chr7	-	8022	26	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-8336	-1505	intron_retention	FALSE	canonical	3	559	junction_20	57.0015578734476	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGAGTAATAGGAAT	8248	False	NA	-32	True	TATAAA	-11	NA	80401964	80362835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937
ES.31223.88	chr7	-	5759	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	157	1528	4	-1528	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAGTATAAATTTATTT	NA	False	NA	-55	True	NA	NA	NA	80453007	80362858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.89	chr7	-	5653	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	112	1679	-23	-1679	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAAGAGCCCTTCCTGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	80453052	80363009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.9	chr7	-	220	1	Intergenic	novelGene_25661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATTAGGAGTTAACAAT	NA	False	NA	NA	False	NA	NA	NA	80351880	80351660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80351700_80351900
ES.31223.90	chr7	-	5440	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	98	1906	-37	-1906	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCGTTTAGAAGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	80453066	80363236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.91	chr7	-	5475	37	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-39	-1963	intron_retention	FALSE	canonical	3	539	junction_36	56.5491155468925	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGTAGACATTGGTA	NA	False	NA	NA	False	NA	NA	NA	80453068	80363293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.93	chr7	-	5456	38	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	114	-1966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	115.945032441434	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTACTTTGTAGACATTG	NA	False	NA	NA	False	NA	NA	NA	80452897	80363296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452643
ES.31223.95	chr7	-	4967	37	NNC	ENSMUSG00000030536.11	novel	3629	14	NA	NA	-11	7364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.344316577992	907	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTGGCTTAAAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	80453040	80369162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80369282_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.96	chr7	-	2945	24	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	98	24797	-37	4698	5prime_fragment	FALSE	canonical	3	539	junction_23	37.1883775571187	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGCTGTCCGACA	NA	False	NA	NA	False	AGTAAA	-18	NA	80453066	80386127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.97	chr7	-	2503	19	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	119	28155	-16	1340	5prime_fragment	FALSE	canonical	3	539	junction_18	41.2443785919015	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGAATGTGTGAGTG	NA	False	NA	NA	False	AATAAA	-10	NA	80453045	80389485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.98	chr7	-	2520	19	NNC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-26	1340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	144.420681806081	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGAATGTGTGAGTG	NA	False	NA	NA	False	AATAAA	-10	NA	80453055	80389485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412238_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ES.31223.99	chr7	-	4129	5	NIC	ENSMUSG00000030536.11	novel	7444	38	NA	NA	-8575	21	intron_retention	FALSE	canonical	3	590	junction_2	23.054283766797	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCTCTAATACTAAGGAAA	8009	False	NA	NA	False	NA	NA	NA	80402203	80390804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80393709_80393865_80393957_80398571_80398736_80401073_80401778_80401937
ES.31224.1	chr7	-	221	1	Intergenic	novelGene_25666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTAAATAAGAAAGTAAT	NA	False	NA	NA	False	TATAAA	-26	NA	80483323	80483102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80483100_80483300
ES.31225.1	chr7	+	210	1	Intergenic	novelGene_25667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGGTCTTTGAGAAGT	NA	False	NA	NA	False	NA	NA	NA	80484177	80484387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80484200_80484400
ES.31226.1	chr7	-	100	1	Intergenic	novelGene_25668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGCGTTGTGAATC	7426	False	NA	NA	False	ATTAAA	-15	NA	80487867	80487767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80487800_80487900
ES.31227.1	chr7	-	2957	1	Intergenic	novelGene_25669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTGTCCAGTTGTCT	6717	False	NA	NA	False	NA	NA	NA	80496639	80493682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80493700_80496600
ES.31228.1	chr7	+	1302	2	FSM	ENSMUSG00000038797.14	ENSMUST00000205361.2	692	2	3	-613	1	613	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTTTGTGATTTT	2922	False	NA	NA	False	AATAAA	-38	NA	80510701	80513836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80511083_80512915
ES.31228.2	chr7	+	2235	3	FSM	ENSMUSG00000038797.14	ENSMUST00000147125.2	1582	3	2	-655	2	6	multi-exon	FALSE	canonical	2	3	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTTTGTCGTCATTTC	2923	False	NA	NA	False	NA	NA	NA	80510702	80526291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80510826_80512915_80513420_80524683
ES.31229.1	chr7	+	180	1	Intergenic	novelGene_25671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGGCGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	80548471	80548651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80548500_80548700
ES.3123.1	chr10	-	190	1	Intergenic	novelGene_2449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGCTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	75649601	75649411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75649400_75649600
ES.31230.1	chr7	-	1804	9	NNC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	50	19048	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.5335499947639	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAACTCACAGATTCT	NA	False	NA	NA	False	NA	NA	NA	80550917	80521422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80521460_80541006_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
ES.31230.10	chr7	-	4382	6	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	95	junction_5	17.3712406004868	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTTGTGTGTATGA	NA	False	NA	-5	True	AATAAA	-14	NA	80551016	80540472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80550185_80550391_80550460_80550932
ES.31230.11	chr7	-	1772	8	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	57	14	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	45.3332332932069	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTTAGTTTTTGTAC	NA	False	NA	7	True	AATAAA	-34	NA	80550910	80540994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
ES.31230.13	chr7	-	3027	6	FSM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	64	-11	49	11	multi-exon	FALSE	canonical	3	120	junction_3	8.49941174435031	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATTTACTTAGTTTTTG	NA	False	NA	4	True	AATAAA	-31	NA	80550918	80540997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
ES.31230.14	chr7	-	3035	6	NIC	ENSMUSG00000025722.17	novel	3142	7	NA	NA	60	7	intron_retention	FALSE	canonical	3	8	junction_5	51.656558150926	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCAATTTACTTAGTT	NA	False	NA	0	True	AATAAA	-27	NA	80550907	80541001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550460_80550643
ES.31230.15	chr7	-	1582	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	1	531	1	7	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGCAATTTACTTAGTT	NA	False	NA	0	True	AATAAA	-27	NA	80551016	80541001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ES.31230.16	chr7	-	3032	6	NIC	ENSMUSG00000025722.17	novel	3080	6	NA	NA	49	-1	intron_retention	FALSE	canonical	1	1	junction_5	54.4227893441709	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAGCAATTAGCAATTT	NA	False	NA	-8	True	AATAAA	-19	NA	80550918	80541009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550202_80550391
ES.31230.17	chr7	-	3267	5	ISM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	18	2	3	-2	intron_retention	FALSE	canonical	3	120	junction_3	9.17877987534291	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGCAATTAGCAATT	NA	False	NA	-9	True	AATAAA	-18	NA	80550964	80541010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095
ES.31230.18	chr7	-	2822	7	NIC	ENSMUSG00000025722.17	novel	3142	7	NA	NA	57	-2	intron_retention	FALSE	canonical	3	8	junction_6	48.5503747553908	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGCAATTAGCAATT	NA	False	NA	-9	True	AATAAA	-18	NA	80550910	80541010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550643
ES.31230.19	chr7	-	2537	6	NIC	ENSMUSG00000025722.17	novel	3142	7	NA	NA	1	-15	intron_retention	FALSE	canonical	3	13	junction_3	49.3380177956107	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAATACAAGTAAGAA	NA	False	NA	-22	True	AATAAA	-5	NA	80551016	80541023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
ES.31230.2	chr7	-	3150	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	-4	-4	-2	3	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTGTATGAGTACA	NA	False	NA	0	True	AATAAA	-19	NA	80550984	80540467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ES.31230.20	chr7	-	1737	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	-4	-15	intron_retention	FALSE	canonical	3	95	junction_6	16.6674999791677	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAATACAAGTAAGAA	NA	False	NA	-22	True	AATAAA	-5	NA	80550986	80541023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550460_80550932
ES.31230.21	chr7	-	5539	3	ISM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	4	15	2	-15	intron_retention	FALSE	canonical	3	139	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAATACAAGTAAGAA	NA	False	NA	-22	True	AATAAA	-5	NA	80550978	80541023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80543090_80543396_80543562_80547670
ES.31230.23	chr7	-	1627	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	84	-15	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	60.0684794399044	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAATACAAGTAAGAA	NA	False	NA	-22	True	AATAAA	-5	NA	80550883	80541023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550643
ES.31230.24	chr7	-	370	1	Intergenic	novelGene_25670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	80544674	80544304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80544300_80544700
ES.31230.3	chr7	-	7947	4	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	120	junction_2	10.3387082795139	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80550995	80540470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80543090_80543396_80547736_80548250_80548340_80550095
ES.31230.5	chr7	-	2023	7	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	46.1173021278951	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80551016	80540471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80550095_80550185_80550391_80550460_80550932
ES.31230.6	chr7	-	6520	6	NIC	ENSMUSG00000025722.17	novel	2114	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	95	junction_5	17.7831380807775	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80551008	80540471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80541658_80542723_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ES.31230.7	chr7	-	2080	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	33	1	-2	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80550984	80540471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ES.31230.8	chr7	-	3697	5	ISM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	125	0	112	0	intron_retention	FALSE	canonical	3	120	junction_3	9.17877987534291	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80550855	80540471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095
ES.31231.1	chr7	-	5078	2	FSM	ENSMUSG00000025723.13_ENSMUSG00000025724.13	ENSMUST00000149792.2	506	2	-4565	-7	-3863	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGGCCTCTCCTTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	80558687	80551974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80552247_80553881
ES.31231.2	chr7	-	707	3	FSM	ENSMUSG00000025723.13	ENSMUST00000026817.11	705	3	-9	7	-9	-1	multi-exon	FALSE	canonical	2	13	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAATGTCTGGGCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	80554833	80551982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80552252_80553881_80554055_80554568
ES.31232.1	chr7	-	185	1	FSM	ENSMUSG00000109390.2	ENSMUST00000207577.2	3794	1	3608	1	3608	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	80560306	80560121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80560100_80560300
ES.31233.1	chr7	+	3054	1	Antisense	novelGene_ENSMUSG00000025724.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTTTCAAACAGATACA	NA	False	NA	NA	False	NA	NA	NA	80576178	80579232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_80576200_80579200
ES.31234.1	chr7	-	1360	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	-16	1	-16	-1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTTCCCTGAATTCTG	1369	False	NA	-6	True	AATAAA	-17	NA	80597544	80565125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ES.31234.10	chr7	-	5440	5	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	953	junction_3	41.6112965431264	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGTGTTTGTATTTT	1620	False	NA	-8	True	ATTAAA	-14	NA	80597293	80565310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80565653_80565922_80565981_80572848_80577635_80584774_80584885_80597149
ES.31234.11	chr7	-	5640	4	ISM	ENSMUSG00000025724.13	ENSMUST00000147881.8	728	7	19209	-200	-2652	3	intron_retention	FALSE	canonical	1	1	junction_3	461.269504254894	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGTGTTTGTATTTT	NA	False	NA	-8	True	ATTAAA	-14	NA	80578050	80565310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848
ES.31234.12	chr7	-	1319	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	-162	188	-162	1	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCCAGTGTTTGTATT	1223	False	NA	-10	True	ATTAAA	-12	NA	80597690	80565312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ES.31234.14	chr7	-	859	6	NNC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	-9727	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	390.305213903171	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	NA	False	NA	-11	True	ATTAAA	-11	NA	80585125	80565313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80585043
ES.31234.15	chr7	-	738	5	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	430.971576789004	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1653	False	NA	-11	True	ATTAAA	-11	NA	80597260	80565313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80565653_80565922_80565981_80572848_80572969_80584774_80584885_80597149
ES.31234.16	chr7	-	1090	7	NNC	ENSMUSG00000025724.13	novel	1094	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	464.953193582131	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1655	False	NA	-11	True	ATTAAA	-11	NA	80597258	80565313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80590336_80590541_80597149
ES.31234.18	chr7	-	6247	2	FSM	ENSMUSG00000025724.13	ENSMUST00000153053.2	495	2	-5752	0	1476	0	multi-exon	FALSE	canonical	3	980	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	NA	False	NA	-11	True	ATTAAA	-11	NA	80571830	80565313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80565653_80565922
ES.31234.20	chr7	-	181	1	Intergenic	novelGene_25672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAGAAAAAAAAGG	7495	False	NA	NA	False	NA	NA	NA	80591418	80591237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80591200_80591400
ES.31234.5	chr7	-	5623	5	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	953	junction_3	41.6112965431264	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTCCCTGAATTCT	1621	False	NA	-7	True	AATAAA	-16	NA	80597292	80565126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80565653_80565922_80565981_80572848_80577635_80584774_80584885_80597149
ES.31234.6	chr7	-	957	5	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	430.971576789004	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTCCCTGAATTCT	1621	False	NA	-7	True	AATAAA	-16	NA	80597292	80565126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80565653_80565922_80565981_80572848_80572969_80584774_80584885_80597149
ES.31234.8	chr7	-	988	5	NIC	ENSMUSG00000025724.13	novel	1345	6	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	2	28	junction_4	420.153245852034	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTCCCTGAATTCT	1630	False	NA	-7	True	AATAAA	-16	NA	80597283	80565126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80597149
ES.31234.9	chr7	-	1347	7	NNC	ENSMUSG00000025724.13	novel	1094	7	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	467.143000946534	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCCTTTCCCTGAATTC	1602	False	NA	-8	True	AATAAA	-15	NA	80597311	80565127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80583130_80583353_80584774_80584885_80597149
ES.31235.1	chr7	-	212	1	Intergenic	novelGene_25673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTCAAAAAACTAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	80603581	80603369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80603400_80603600
ES.31236.1	chr7	-	3166	3	Intergenic	novelGene_25674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTGCCTGCTCAAGAGT	NA	False	NA	NA	False	AATAAA	-36	NA	80619864	80603892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80606603_80614867_80615082_80619622
ES.31236.2	chr7	-	169	1	Intergenic	novelGene_25675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCAAAAAATAGCAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	80618472	80618303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80618300_80618500
ES.31237.1	chr7	+	4767	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-647	3177	-647	534	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGGTTCTGGATATC	NA	False	NA	45	True	NA	NA	NA	80642781	80691735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.10	chr7	+	4269	11	NNC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-16	503	intron_retention	FALSE	canonical	0	0	junction_2	42.4471436023674	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTGCTCTGGAGCAG	NA	False	NA	14	True	AATAAA	-25	NA	80643412	80691704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80643511_80659181_80659288_80672015_80672180_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.11	chr7	+	3968	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	3	491	intron_retention	FALSE	canonical	1	4	junction_1	34.8727597846801	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTGTGGCCACTGT	NA	False	NA	2	True	AATAAA	-13	NA	80643431	80691692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.12	chr7	+	4176	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	4	495	intron_retention	FALSE	canonical	3	63	junction_1	17.6807628511894	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGCCACTGTGCTC	NA	False	NA	6	True	AATAAA	-17	NA	80643432	80691696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.13	chr7	+	4224	11	NNC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	4	492	intron_retention	FALSE	canonical	0	0	junction_2	42.4471436023674	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGTGGCCACTGTG	NA	False	NA	3	True	AATAAA	-14	NA	80643432	80691693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80643511_80659181_80659288_80671784_80671935_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.14	chr7	+	4401	3	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	4	17677	4	2894	5prime_fragment	FALSE	canonical	3	63	junction_1	21	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAATTGTACCTGGCT	NA	False	NA	NA	False	NA	NA	NA	80643432	80677235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80643511_80659181_80659288_80673018
ES.31237.15	chr7	+	4162	11	NNC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	6	493	intron_retention	FALSE	canonical	0	0	junction_4	43.0980277971046	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGGCCACTGTGC	NA	False	NA	4	True	AATAAA	-15	NA	80643434	80691694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80685943_80686033_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.16	chr7	+	4931	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	19	1265	intron_retention	FALSE	canonical	3	63	junction_1	17.6807628511894	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGCTCTTGTATTCCT	NA	False	NA	13	True	AATAAA	-18	NA	80643447	80692466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.17	chr7	+	4676	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	38	1264	intron_retention	FALSE	canonical	0	0	junction_8	35.0071421284286	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAGGCTCTTGTATTCC	NA	False	NA	12	True	AATAAA	-17	NA	80643466	80692465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80691095
ES.31237.18	chr7	+	5694	1	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-1626	2894	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAATTGTACCTGGCT	NA	False	NA	NA	False	NA	NA	NA	80671541	80677235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80671500_80677200
ES.31237.2	chr7	+	4805	11	NNC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-482	1263	intron_retention	FALSE	canonical	0	0	junction_10	33.7521851144485	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTAGGCTCTTGTATTC	NA	False	NA	11	True	AATAAA	-16	NA	80642946	80692464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095_80691606_80692131
ES.31237.3	chr7	+	5096	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-244	2445	-244	1266	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTCTTGTATTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	80643184	80692467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.5	chr7	+	5085	10	NNC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-223	1262	intron_retention	FALSE	non_canonical	0	0	junction_3	35.3787269554411	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTAGGCTCTTGTATT	NA	False	NA	10	True	AATAAA	-15	NA	80643205	80692463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679182_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.6	chr7	+	4573	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-217	492	intron_retention	FALSE	canonical	3	63	junction_1	17.519631845447	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGTGGCCACTGTG	NA	False	NA	3	True	AATAAA	-14	NA	80643211	80691693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.7	chr7	+	7364	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-207	140	-207	-140	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTCCAGTGCCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	80643221	80694772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.8	chr7	+	7490	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	-192	-1	-192	1	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCATGTTCTGAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	80643236	80694913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ES.31237.9	chr7	+	7581	9	NIC	ENSMUSG00000005621.12	novel	7297	10	NA	NA	-186	-1	intron_retention	FALSE	canonical	3	63	junction_1	17.6807628511894	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTCATGTTCTGAAGCC	NA	False	NA	NA	False	NA	NA	NA	80643242	80694911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80688100_80688300_80688414_80688877_80689014_80691095
ES.31238.1	chr7	-	1056	1	NIC	ENSMUSG00000109008.3	novel	391	2	NA	NA	5	-11233	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTAGTGCATGTGTGTAAT	NA	False	NA	NA	False	AATAAA	-22	NA	80643158	80642102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80642100_80643200
ES.31239.1	chr7	-	153	1	Intergenic	novelGene_25676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	80657922	80657769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80657800_80657900
ES.3124.1	chr10	+	138	1	Antisense	novelGene_ENSMUSG00000033318.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75667492	75667630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_75667500_75667600
ES.31240.1	chr7	+	6081	14	FSM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	-2	290	-2	-290	multi-exon	TRUE	canonical	0	0	junction_1	8.19438399112971	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAGACTAGGACTCACTT	NA	False	NA	NA	False	AGTAAA	-24	NA	80707345	80755070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80707521_80713696_80713736_80717626_80717749_80726620_80726739_80727293_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
ES.31240.2	chr7	+	5603	15	NNC	ENSMUSG00000038763.13	novel	6369	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.3824403441032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	22	True	AATAAA	-34	NA	80707348	80755360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80707521_80713696_80713736_80717626_80717749_80726620_80726739_80727293_80727356_80728120_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
ES.31240.3	chr7	+	5247	10	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	20615	1	-16616	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	7.08676387515643	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	False	NA	21	True	AATAAA	-33	NA	80727962	80755359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
ES.31240.4	chr7	+	2662	8	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	37235	1	4	-1	3prime_fragment	FALSE	canonical	3	12	junction_3	5.00611870512435	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	False	NA	21	True	AATAAA	-33	NA	80744582	80755359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
ES.31240.5	chr7	+	2408	4	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	42166	1	4935	-1	3prime_fragment	FALSE	canonical	3	13	junction_3	2.94392028877595	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	False	NA	21	True	AATAAA	-33	NA	80749513	80755359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80750008_80750655_80750880_80753092_80753142_80753718
ES.31241.1	chr7	-	3922	1	Antisense	novelGene_ENSMUSG00000038763.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATTTAAAAAAAAAAAGAAA	9666	False	NA	NA	False	ATTAAA	-9	NA	80742362	80738440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_80738400_80742400
ES.31242.1	chr7	-	2125	1	Antisense	novelGene_ENSMUSG00000038763.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACTGCACAAAGAAGTG	1248	False	NA	NA	False	NA	NA	NA	80756783	80754658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_80754700_80756800
ES.31243.1	chr7	+	3226	20	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	-2059	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.7913028338171	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80762487	80820164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80762594_80764178_80764327_80764420_80764626_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.10	chr7	+	1016	5	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27013	5483	27013	-5483	internal_fragment	FALSE	canonical	3	108	junction_1	5.1478150704935	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTCTTCTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	80791610	80814681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273
ES.31243.11	chr7	+	1879	8	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27027	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	41.7367845392223	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80791624	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80818711_80818811_80818914_80819027_80819287
ES.31243.12	chr7	+	1803	8	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27060	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.4816014628717	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTTGTGTGTACAGTG	NA	False	NA	9	True	AATAAA	-18	NA	80791657	80820162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80791793_80810712_80810844_80814018_80814190_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.13	chr7	+	1590	7	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27141	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.1037477387203	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80791738	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80791793_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.14	chr7	+	2323	9	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	36041	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.4760607837206	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80800638	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80801169_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.15	chr7	+	3016	8	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	37327	1	37327	-1	3prime_fragment	FALSE	canonical	3	109	junction_2	6.68534797531291	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80801924	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.16	chr7	+	174	1	Intergenic	novelGene_25677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCTTTTAAAAAATAAA	697	False	NA	NA	False	NA	NA	NA	80804213	80804387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80804200_80804400
ES.31243.17	chr7	+	8595	1	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	40718	-6254	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTGGTTTTGAAACCC	1799	False	NA	NA	False	NA	NA	NA	80805315	80813910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80805300_80813900
ES.31243.18	chr7	+	1745	7	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	46037	1	46037	-1	3prime_fragment	FALSE	canonical	3	109	junction_1	6.7433094413813	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	7118	False	NA	10	True	AATAAA	-19	NA	80810634	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.19	chr7	+	1370	5	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	49673	1	49673	-1	3prime_fragment	FALSE	canonical	3	117	junction_2	4.96865172858795	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80814270	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.2	chr7	+	2896	18	NNC	ENSMUSG00000025726.12	novel	2899	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.1638209197507	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80764550	80820164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80764680_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.3	chr7	+	3067	19	NNC	ENSMUSG00000025726.12	novel	2899	18	NA	NA	20	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.4236207690026	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTACTATTTGTGT	NA	False	NA	1	True	AATAAA	-10	NA	80764566	80820154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80764680_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80773390_80773588_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.4	chr7	+	3003	19	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.2693441360889	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80764566	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80764626_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80773409_80773588_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.5	chr7	+	2687	17	NIC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	56.5418816011636	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80764578	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80764626_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.6	chr7	+	2022	10	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	23247	-1	23247	1	3prime_fragment	FALSE	canonical	3	9	junction_1	35.0706517943986	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGTACAGTGTGT	6256	False	NA	12	True	AATAAA	-21	NA	80787844	80820165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.7	chr7	+	2187	10	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	26986	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.937244568175	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	9995	False	NA	10	True	AATAAA	-19	NA	80791583	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80791793_80803147_80803274_80810712_80810844_80811289_80811475_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.8	chr7	+	1984	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27004	1	27004	-1	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80791601	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ES.31243.9	chr7	+	2825	8	NNC	ENSMUSG00000025726.12	novel	2846	18	NA	NA	27008	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	42.0805835297478	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGTGTGTACAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	80791605	80820163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80815221_80818533_80818811_80818914_80819027_80819287
ES.31244.1	chr7	-	7616	2	Antisense	novelGene_ENSMUSG00000025726.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACATTTCAGGCAAAG	1633	False	NA	NA	False	NA	NA	NA	80801690	80792186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_80797289_80799176
ES.31245.1	chr7	+	244	1	Intergenic	novelGene_25678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTGCCAAGAGTTCCAC	5565	False	NA	NA	False	NA	NA	NA	80836393	80836637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80836400_80836600
ES.31246.1	chr7	+	3840	22	NNC	ENSMUSG00000025584.18	novel	861	9	NA	NA	-14898	0	intron_retention	TRUE	canonical	0	0	junction_1	59.7959493239764	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTTGCCATTTCTT	NA	False	NA	7	True	ATTAAA	-18	NA	80848445	80984281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80848494_80848808_80848876_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617
ES.31246.10	chr7	+	4260	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-309	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.6780859315898	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATTTGTTGCCATTT	798	False	NA	4	True	ATTAAA	-15	NA	80863034	80984278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930447_80930600_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.12	chr7	+	3783	19	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-292	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	47.5170209919626	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTATTTGTTGCCAT	815	False	NA	2	True	ATTAAA	-13	NA	80863051	80984276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.14	chr7	+	3857	21	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-289	-72	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	46.4075424904185	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGAAATGTTAGTTTCA	818	False	NA	-65	True	TATAAA	-17	NA	80863054	80984209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.15	chr7	+	4503	21	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-288	3	-288	-3	intron_retention	FALSE	canonical	3	151	junction_8	20.5156038175824	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATTTGTTGCCATTT	819	False	NA	4	True	ATTAAA	-15	NA	80863055	80984278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617
ES.31246.16	chr7	+	3078	16	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-288	5495	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	50.9986492195844	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGATTTCACAGAGCTC	819	False	NA	NA	False	ATTAAA	-13	NA	80863055	80974683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763
ES.31246.18	chr7	+	4246	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-288	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.6387596409696	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTTGCCATTTCTT	819	False	NA	7	True	ATTAAA	-18	NA	80863055	80984281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80959446_80959603_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.19	chr7	+	4262	24	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-285	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.9708906095471	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTGCCATTTCTTT	822	False	NA	8	True	ATTAAA	-19	NA	80863058	80984282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941122_80941229_80941636_80941705_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.2	chr7	+	4246	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-440	-4	-440	4	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGCCATTTCTTTGTA	667	False	NA	11	True	ATTAAA	-22	NA	80862903	80984285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.20	chr7	+	4346	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-268	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	69.1958085244719	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATTTGTTGCCATTT	839	False	NA	4	True	ATTAAA	-15	NA	80863075	80984278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863270_80863512_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964488_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977622_80977944_80982617_80982748_80983163
ES.31246.21	chr7	+	2850	14	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-258	5498	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.1363513316318	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCACAGAGCTCCTT	849	False	NA	NA	False	ATTAAA	-16	NA	80863085	80974686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80951934_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763
ES.31246.22	chr7	+	4137	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-243	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	58.774344349546	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTATTTGTTGCCA	864	False	NA	1	True	ATTAAA	-12	NA	80863100	80984275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964488_80964587_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.23	chr7	+	3872	22	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-98	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	45.5076181606728	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTGCCATTTCTTT	1009	False	NA	8	True	ATTAAA	-19	NA	80863245	80984282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983192
ES.31246.24	chr7	+	2577	2	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-7	51279	-7	-31933	intron_retention	FALSE	canonical	3	191	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAACCAACAACAATAAAA	1100	False	NA	NA	False	NA	NA	NA	80863336	80933002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80863837_80930925
ES.31246.25	chr7	+	3787	22	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	60.1536958148159	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTATTTGTTGCCAT	1102	False	NA	2	True	ATTAAA	-13	NA	80863338	80984276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964930_80966716_80966779_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.26	chr7	+	4240	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_3	68.4490067782259	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGCCATTTCTTTG	1106	False	NA	9	True	ATTAAA	-20	NA	80863342	80984283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80939876_80939943_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964488_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.28	chr7	+	3598	19	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	44.8850383387011	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTTGCCATTTCTT	1110	False	NA	7	True	ATTAAA	-18	NA	80863346	80984281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.29	chr7	+	4014	22	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	44.7712756148561	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTATTTGTTGCCAT	1110	False	NA	2	True	ATTAAA	-13	NA	80863346	80984276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950167_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.3	chr7	+	3368	18	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-403	9591	-403	5502	5prime_fragment	FALSE	canonical	3	151	junction_8	21.922007081097	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACAGAGCTCCTTTGTA	704	False	NA	NA	False	ATTAAA	-20	NA	80862940	80974690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763
ES.31246.30	chr7	+	3762	21	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	46.2059249447514	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATTTGTTGCCATTT	1110	False	NA	4	True	ATTAAA	-15	NA	80863346	80984278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967200_80969059_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.31	chr7	+	3836	23	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	58.774344349546	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTATTTGTTGCCA	1111	False	NA	1	True	ATTAAA	-12	NA	80863347	80984275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964488_80964533_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.32	chr7	+	4157	22	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	9	-5	intron_retention	FALSE	canonical	0	0	junction_11	45.6158662773802	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTATTTGTTGCCAT	1116	False	NA	2	True	ATTAAA	-13	NA	80863352	80984276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964488_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.33	chr7	+	3847	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.1097565100121	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTATTTGTTGCCATT	1124	False	NA	3	True	ATTAAA	-14	NA	80863360	80984277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80939876_80939943_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.36	chr7	+	3566	22	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	226	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.6254096369024	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGCCATTTCTTTG	1333	False	NA	9	True	ATTAAA	-20	NA	80863569	80984283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863825_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.37	chr7	+	2903	14	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	293	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	51.2249938994628	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTATTTGTTGCCATT	1400	False	NA	3	True	ATTAAA	-14	NA	80863636	80984277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80863837_80930925_80930983_80932570_80932762_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.38	chr7	+	3143	20	NNC	ENSMUSG00000025584.18	novel	861	9	NA	NA	-9132	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2365415618646	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATTTGTTGCCATTTC	NA	False	NA	5	True	ATTAAA	-16	NA	80936322	80984279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80936407_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.39	chr7	+	4618	13	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	60	1	intron_retention	FALSE	non_canonical	0	0	junction_5	53.3736175985435	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTGCCATTTCTTT	NA	False	NA	8	True	ATTAAA	-19	NA	80956500	80984282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968804_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.4	chr7	+	4300	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-394	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	58.6780859315898	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTGCCATTTCTTTGT	713	False	NA	10	True	ATTAAA	-21	NA	80862949	80984284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80921580_80921682_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.40	chr7	+	2498	12	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	95341	6	2244	-6	3prime_fragment	FALSE	canonical	3	160	junction_4	14.6191315838001	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTATTTGTTGCCA	NA	False	NA	1	True	ATTAAA	-12	NA	80958684	80984275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.41	chr7	+	4030	7	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	99099	9598	6002	5495	internal_fragment	FALSE	canonical	3	160	junction_3	14.599276998841	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGATTTCACAGAGCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	80962442	80974683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763
ES.31246.42	chr7	+	6793	10	NIC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	7242	-6	intron_retention	FALSE	canonical	3	160	junction_3	15.8145112296302	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTATTTGTTGCCA	NA	False	NA	1	True	ATTAAA	-12	NA	80963682	80984275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.43	chr7	+	1551	4	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	112653	-3	19556	3	3prime_fragment	FALSE	canonical	3	180	junction_1	8.37987005998436	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTGCCATTTCTTTGT	NA	False	NA	10	True	ATTAAA	-21	NA	80975996	80984284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.5	chr7	+	3913	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-350	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.6060811923536	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGCCATTTCTTTG	757	False	NA	9	True	ATTAAA	-20	NA	80862993	80984283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863270_80863510_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.6	chr7	+	4242	23	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-348	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.0067857244533	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATTTGTTGCCATTTC	759	False	NA	5	True	ATTAAA	-16	NA	80862995	80984279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80945890_80945985_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31246.7	chr7	+	3501	17	ISM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	-334	12554	-334	2539	5prime_fragment	FALSE	canonical	3	151	junction_8	22.5844768314433	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGTTTTGGTCAGTAT	773	False	NA	NA	False	NA	NA	NA	80863009	80971727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399
ES.31246.9	chr7	+	4425	24	NNC	ENSMUSG00000025584.18	novel	3802	22	NA	NA	-329	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.5452267548668	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTATTTGTTGCCATT	778	False	NA	3	True	ATTAAA	-14	NA	80863014	80984277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_80863837_80921580_80921682_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80959446_80959644_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ES.31247.1	chr7	+	177	1	Intergenic	novelGene_25681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATGTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80987217	80987394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_80987200_80987400
ES.31248.1	chr7	-	3225	1	FSM	ENSMUSG00000083774.2	ENSMUST00000121753.2	513	1	-2386	-326	-2386	326	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGGAGGGAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	80875008	80871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80871800_80875000
ES.31249.1	chr7	-	2778	1	Intergenic	novelGene_25679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9397	False	NA	NA	False	NA	NA	NA	80895673	80892895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80892900_80895700
ES.3125.1	chr10	-	1466	5	FSM	ENSMUSG00000033318.8	ENSMUST00000038257.7	1370	5	357	-453	-45	-278	multi-exon	FALSE	canonical	3	39	junction_1	6.29980158417708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGAGCTATTGGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	75670358	75667225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008
ES.3125.2	chr10	-	2128	4	NIC	ENSMUSG00000033318.8	novel	1370	5	NA	NA	85	3	intron_retention	FALSE	canonical	3	39	junction_1	6.94422221866655	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTTTCTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-24	NA	75670630	75667675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75667929_75668228_75668403_75668494_75669574_75670008
ES.3125.3	chr10	-	1475	6	NNC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	-687	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	18.5752523536021	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTTTTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-20	NA	75671402	75667679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670716_75671296
ES.3125.4	chr10	-	2262	2	ISM	ENSMUSG00000033318.8	ENSMUST00000218500.2	794	5	-27	-100	-27	-4	intron_retention	FALSE	canonical	3	39	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCCTTTTTTTTCTT	NA	False	NA	-8	True	AATAAA	-17	NA	75670244	75667682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75667929_75668228
ES.31250.1	chr7	-	5329	1	Intergenic	novelGene_25680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCATCAC	2051	False	NA	NA	False	NA	NA	NA	80927405	80922076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_80922100_80927400
ES.31251.1	chr7	-	3130	5	NNC	ENSMUSG00000061787.16	novel	673	4	NA	NA	1	8828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5415.43370262253	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACCTTAAATGTCTGC	NA	False	NA	NA	False	AATAAA	-28	NA	80994974	80983651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80986433_80993482_80993549_80994058_80994165_80994604_80994757_80994949
ES.31251.10	chr7	-	1421	3	NIC	ENSMUSG00000061787.16	novel	494	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	8882	junction_2	2021	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994986	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80992598_80993482_80994757_80994949
ES.31251.11	chr7	-	447	5	NNC	ENSMUSG00000061787.16	novel	494	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5323.36582318931	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994969	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80992598_80993482_80993542_80994058_80994165_80994604_80994757_80994949
ES.31251.12	chr7	-	496	5	NNC	ENSMUSG00000061787.16	novel	660	4	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5696.52329824956	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAAAACAAGTTTGTCT	NA	False	NA	-22	True	AAAACA	-43	NA	80994973	80992492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994796_80994945
ES.31251.2	chr7	-	567	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	-70	-3	-70	2	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTATTGTTCTTGCTG	NA	False	NA	-7	True	AATAAA	-15	NA	80995072	80992477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
ES.31251.4	chr7	-	1784	3	NIC	ENSMUSG00000061787.16	novel	673	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	8882	junction_2	2248	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994974	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80993549_80994058_80994757_80994949
ES.31251.5	chr7	-	1989	2	ISM	ENSMUSG00000061787.16	ENSMUST00000156346.2	673	4	-6	-677	-4	0	intron_retention	FALSE	canonical	3	13378	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994986	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_80993549_80994058
ES.31251.7	chr7	-	2270	1	NIC	ENSMUSG00000061787.16	novel	494	5	NA	NA	215	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994757	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80992500_80994800
ES.31251.8	chr7	-	933	4	NIC	ENSMUSG00000061787.16	novel	494	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	8882	junction_3	2020.94301420566	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80995008	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80992598_80993482_80993549_80994058_80994757_80994949
ES.31251.9	chr7	-	2328	2	FSM	ENSMUSG00000061787.16	ENSMUST00000138936.2	328	2	-36	-1964	-6	0	multi-exon	FALSE	canonical	3	8882	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80995008	80992487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80994757_80994949
ES.31252.1	chr7	-	3121	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	10.3116719552358	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81104531	80996773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.10	chr7	-	5443	10	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	30	-1	intron_retention	FALSE	canonical	3	9	junction_9	19.7039821756986	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81105183	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.11	chr7	-	3075	12	NNC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	905	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	21.3680846432785	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81103518	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81103428
ES.31252.12	chr7	-	5363	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	48	junction_6	9.89325746202314	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104525	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.13	chr7	-	4501	11	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-54	-1	intron_retention	FALSE	canonical	3	45	junction_4	10.8115678788971	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104560	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.14	chr7	-	4566	11	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	10	-1	intron_retention	FALSE	canonical	3	9	junction_10	19.0685605120051	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81105203	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.15	chr7	-	3305	12	NNC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.4494943258218	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81105323	80996775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104987
ES.31252.16	chr7	-	3439	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	-330	2	304	0	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104836	80996775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.17	chr7	-	3145	12	NNC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	18.8745313553555	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104593	80996775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006692_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.19	chr7	-	4270	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	6	junction_8	20.9337579574768	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81104505	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81085950_81086126_81104381
ES.31252.2	chr7	-	5533	10	NNC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	451	0	intron_retention	FALSE	canonical	1	1	junction_9	21.9291789378647	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81103972	80996773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81103659
ES.31252.20	chr7	-	3130	12	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_11	19.4621905114541	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81105142	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104980
ES.31252.21	chr7	-	3239	12	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	18.2548533114207	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81105230	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.22	chr7	-	4459	11	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	28	junction_4	14.058449416632	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81104505	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.23	chr7	-	3190	13	NNC	ENSMUSG00000025586.18	novel	1777	12	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.8416136292553	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81104531	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81020572_81020627_81021759_81021952_81085950_81086126_81104381
ES.31252.24	chr7	-	3208	13	NNC	ENSMUSG00000025586.18	novel	1777	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.6377927853396	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81104505	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021952_81081309_81081423_81085950_81086126_81104381
ES.31252.25	chr7	-	4383	11	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	133	-1	intron_retention	FALSE	canonical	3	9	junction_10	20.68912757948	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81105007	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.26	chr7	-	3079	12	NNC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	884	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	19.9536653357367	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGTAGTTTTGTCTCT	NA	False	NA	-3	True	AATAAA	-12	NA	81103539	80996776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81103428
ES.31252.27	chr7	-	4368	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	39	316	intron_retention	FALSE	canonical	3	48	junction_6	9.89325746202314	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGATGGTGGTGATGC	NA	False	NA	NA	False	ATTAAA	-21	NA	81104467	80997711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31252.28	chr7	-	881	1	Intergenic	novelGene_25682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTGATT	NA	False	NA	NA	False	AATAAA	-10	NA	81071095	81070214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81070200_81071100
ES.31252.29	chr7	-	178	1	Intergenic	novelGene_25683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	81081808	81081630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81081600_81081800
ES.31252.3	chr7	-	3994	11	NIC	ENSMUSG00000025586.18	novel	1777	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	7	junction_9	18.9949993419321	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104505	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021952_81085950_81086126_81104381
ES.31252.4	chr7	-	3239	12	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	19.84068780466	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81105213	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.5	chr7	-	4113	11	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	8	-1	intron_retention	FALSE	canonical	3	9	junction_10	18.740330840196	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81105205	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104959
ES.31252.7	chr7	-	2907	11	NIC	ENSMUSG00000025586.18	novel	2969	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	18.471870506259	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104507	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81085950_81086126_81104381
ES.31252.8	chr7	-	3083	12	NNC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	19.6380470658868	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTAGTTTTGTCTCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	81104506	80996774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005733_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ES.31253.1	chr7	-	3582	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-691	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	17.7155299102228	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	NA	False	NA	1	True	AATAAA	-17	NA	81140249	81110146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81140055
ES.31253.11	chr7	-	3534	24	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	4702	-3	intron_retention	FALSE	canonical	3	56	junction_15	11.607637144381	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81134856	81110149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781
ES.31253.12	chr7	-	3492	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	4718	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.2582658803421	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81134840	81110149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113216_81113341_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781
ES.31253.15	chr7	-	3703	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	62	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	18.8703365099831	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTCTGGCTCACCTTTC	NA	False	NA	-3	True	AATAAA	-13	NA	81139496	81110150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134378_81134583_81134659_81134781_81134858_81139285
ES.31253.17	chr7	-	3367	24	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	5075	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	18.423294205331	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTCTGGCTCACCTTTC	NA	False	NA	-3	True	AATAAA	-13	NA	81134483	81110150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134349
ES.31253.18	chr7	-	3668	27	NNC	ENSMUSG00000062444.16	novel	3383	27	NA	NA	-247	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26.1945384794969	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTCTGGCTCACCTTTC	7393	False	NA	-3	True	AATAAA	-13	NA	81143920	81110150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112647_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114553_81114882_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255_81143454_81143836
ES.31253.2	chr7	-	3648	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	23.0026085477278	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCACCTTTCCTT	NA	False	NA	0	True	AATAAA	-16	NA	81139556	81110147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126492_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134264_81134583_81134659_81134781_81134858_81139285
ES.31253.20	chr7	-	3581	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.0359676581891	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTCTGGCTCACCTTTC	7855	False	NA	-3	True	AATAAA	-13	NA	81143458	81110150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115924_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ES.31253.24	chr7	-	2882	10	ISM	ENSMUSG00000062444.16	ENSMUST00000238438.2	3383	27	26557	-229	-1827	-5	intron_retention	FALSE	canonical	3	57	junction_7	13.1129942150506	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATTCTGGCTCACCTTT	NA	False	NA	-4	True	AATAAA	-12	NA	81116870	81110151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404
ES.31253.25	chr7	-	3671	26	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	18.9355116117838	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATTCTGGCTCACCTTT	NA	False	NA	-4	True	AATAAA	-12	NA	81139567	81110151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126482_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
ES.31253.3	chr7	-	3715	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-55	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCACCTTTCCTT	NA	False	NA	0	True	AATAAA	-16	NA	81139613	81110147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
ES.31253.4	chr7	-	3481	25	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	31	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	22.7264835721577	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCACCTTTCCTT	NA	False	NA	0	True	AATAAA	-16	NA	81139527	81110147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81115988_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
ES.31253.5	chr7	-	3845	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	-41	2	-41	-2	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	7599	False	NA	-1	True	AATAAA	-15	NA	81143714	81110148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ES.31253.6	chr7	-	3580	24	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	5051	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	22.7814470331122	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	NA	False	NA	-1	True	AATAAA	-15	NA	81134507	81110148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81127961_81128069_81134173
ES.31253.7	chr7	-	3799	25	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	-58	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	20.9214386986704	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTCACCTTTCCT	7582	False	NA	-1	True	AATAAA	-15	NA	81143731	81110148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ES.31253.8	chr7	-	5099	24	NNC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_3	20.4640862971528	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	7860	False	NA	-2	True	AATAAA	-14	NA	81143453	81110149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81110550_81110675_81110815_81112651_81112716_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ES.31253.9	chr7	-	5309	15	NIC	ENSMUSG00000062444.16	novel	3230	25	NA	NA	2643	-3	intron_retention	FALSE	canonical	3	56	junction_14	12.6984250992003	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTGGCTCACCTTTCC	NA	False	NA	-2	True	AATAAA	-14	NA	81125515	81110149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604
ES.31254.1	chr7	-	717	6	NNC	ENSMUSG00000061877.14	novel	640	6	NA	NA	-277	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGATGTTGGAGGTTC	3007	False	NA	NA	False	ATTAAA	-17	NA	81148306	81144021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81144127_81144873_81145122_81145326_81145529_81146597_81146616_81147979_81148078_81148260
ES.31255.1	chr7	+	6251	2	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	-4	-15	intron_retention	FALSE	canonical	3	93	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	-11	True	AGTAAA	-26	NA	81173293	81181227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81179276_81180958
ES.31255.2	chr7	+	2605	3	FSM	ENSMUSG00002076102.1_ENSMUSG00000097277.8	ENSMUST00000181903.8	679	3	-1	-1925	-1	-15	multi-exon	FALSE	canonical	3	8	junction_2	13.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	-11	True	AGTAAA	-26	NA	81173296	81181227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81173425_81178534_81178689_81178904
ES.31255.3	chr7	+	911	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	-3	-15	intron_retention	FALSE	canonical	3	8	junction_2	35.4620297720753	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	-11	True	AGTAAA	-26	NA	81173307	81181227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81173425_81178534_81178689_81178904_81179276_81180958
ES.31255.4	chr7	+	5854	3	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	7	intron_retention	FALSE	canonical	3	93	junction_2	5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTATTATGTTTTAGT	NA	False	NA	15	True	AATAAA	-20	NA	81173310	81181253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81178689_81179094_81179276_81180958
ES.31255.5	chr7	+	7938	1	FSM	ENSMUSG00002076102.1	ENSMUST00020182748.1	127	1	-6290	-1521	-6290	1521	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGTATTATGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	81173312	81181250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81173300_81181200
ES.31255.6	chr7	+	682	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	28	15	-19	-15	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	-11	True	AGTAAA	-26	NA	81173346	81181227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
ES.31255.7	chr7	+	710	4	NIC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	41.2148840428633	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	False	NA	-11	True	AGTAAA	-26	NA	81173365	81181227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81173472_81178534_81178689_81179094_81179276_81180958
ES.31255.8	chr7	+	3684	4	NNC	ENSMUSG00000097277.8	novel	720	4	NA	NA	1603	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.3776766223675	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGGGTATTATGTT	NA	False	NA	10	True	AATAAA	-15	NA	81174968	81181248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81178028_81178534_81178689_81179094_81179276_81180958
ES.31256.1	chr7	-	4723	7	Fusion	ENSMUSG00000038663.8_ENSMUSG00000104453.2	novel	3985	13	NA	NA	-16422	-1036	multi-exon	TRUE	canonical	0	0	junction_4	2.28521820013368	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGGGGAAACCCTGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	81198691	81181092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_81184997_81186878_81187056_81190059_81190193_81191787_81191922_81194715_81194859_81195604_81195740_81198594
ES.31256.2	chr7	-	3098	13	FSM	ENSMUSG00000038663.8	ENSMUST00000042318.6	3985	13	-160	1047	-160	-1047	multi-exon	FALSE	canonical	0	0	junction_7	2.56444709223819	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGCCAGCCCCCAAT	6025	False	NA	NA	False	NA	NA	NA	81216852	81184102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81184997_81186878_81187056_81190059_81190193_81191787_81191922_81194707_81194859_81195604_81195740_81198594_81198751_81199651_81199774_81201644_81201668_81202710_81202942_81208840_81208937_81209300_81209883_81216588
ES.31257.1	chr7	+	2855	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-70	284	-44	75	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGAGGAAATGGTCTCT	6914	False	NA	12	True	ACTAAA	-22	NA	81220969	81246300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.10	chr7	+	4310	9	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	6	31	intron_retention	FALSE	canonical	3	51	junction_2	7.99609279585974	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACAGAAACTCATACT	6964	False	NA	-32	True	AATAAA	-45	NA	81221019	81246256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81243869_81245634
ES.31257.11	chr7	+	4510	9	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	6	0	intron_retention	FALSE	canonical	2	4	junction_8	21.8274483162829	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTACCTTAAAAATTTT	6964	False	NA	-63	True	AATAAA	-14	NA	81221019	81246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243385
ES.31257.13	chr7	+	4632	10	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	7	2	intron_retention	FALSE	canonical	1	2	junction_5	27.2129235819407	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACCTTAAAAATTTTAT	6965	False	NA	-61	True	AATAAA	-16	NA	81221020	81246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81238165_81238301_81239085_81239274_81241509_81241597_81241754_81241851_81243399
ES.31257.15	chr7	+	2562	9	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	8	2	intron_retention	FALSE	canonical	1	1	junction_2	22.3323616082133	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACCTTAAAAATTTTAT	6966	False	NA	-61	True	AATAAA	-16	NA	81221021	81246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224451_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.16	chr7	+	2886	11	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_8	32.4555080071164	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTACCTTAAAAATTTT	6978	False	NA	-63	True	AATAAA	-14	NA	81221033	81246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81238165_81238301_81239085_81239274_81241509_81241597_81241733_81241851_81243385_81243869_81245634
ES.31257.17	chr7	+	4465	9	ISM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	9	361	9	-2	intron_retention	FALSE	canonical	3	45	junction_8	10.457503287114	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAATTACCTTAAAAATT	6993	False	NA	-65	True	AATAAA	-12	NA	81221048	81246223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399
ES.31257.19	chr7	+	7961	8	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	24	1	intron_retention	FALSE	canonical	3	45	junction_6	9.73946317089104	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACCTTAAAAATTTTA	7008	False	NA	-62	True	AATAAA	-15	NA	81221063	81246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.20	chr7	+	2752	10	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-324	-3	intron_retention	FALSE	canonical	2	4	junction_8	20.6726395192137	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTCTCGTTTCCAGAG	7312	False	NA	NA	False	ATTAAA	-12	NA	81221367	81246581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243385_81243869_81245634
ES.31257.21	chr7	+	1078	1	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	23813	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTCGTTTCCAGAGG	2357	False	NA	NA	False	ATTAAA	-13	NA	81245504	81246582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81245500_81246600
ES.31257.3	chr7	+	3240	11	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-12	-2	intron_retention	FALSE	canonical	1	2	junction_5	26.1505258073332	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTCGTTTCCAGAGG	6946	False	NA	NA	False	ATTAAA	-13	NA	81221001	81246582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81238165_81238301_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.4	chr7	+	3119	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	-36	-14	-10	14	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTTCCATTTCTTTTG	6948	False	NA	NA	False	ATTAAA	-29	NA	81221003	81246598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.5	chr7	+	5784	9	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	45	junction_7	10.2194667179848	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTACCTTAAAAATTTT	6948	False	NA	-63	True	AATAAA	-14	NA	81221003	81246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31257.6	chr7	+	7528	8	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	-7	-2	intron_retention	FALSE	canonical	2	4	junction_2	23.6763896861711	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAATTACCTTAAAAATT	6951	False	NA	-65	True	AATAAA	-12	NA	81221006	81246223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81239274_81241509_81241597_81241754_81241851_81243399
ES.31257.7	chr7	+	2751	10	NNC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	1	2	intron_retention	FALSE	canonical	2	4	junction_8	20.6726395192137	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACCTTAAAAATTTTAT	6959	False	NA	-61	True	AATAAA	-16	NA	81221014	81246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243385_81243869_81245634
ES.31257.9	chr7	+	3075	10	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	1	-2	intron_retention	FALSE	canonical	2	4	junction_2	20.9961783706664	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTCGTTTCCAGAGG	6959	False	NA	NA	False	ATTAAA	-13	NA	81221014	81246582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ES.31258.1	chr7	+	2560	3	Antisense	novelGene_ENSMUSG00000025813.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81265967	81271926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_81266351_81266401_81267628_81270975
ES.31259.1	chr7	-	4654	1	ISM	ENSMUSG00000025813.15	ENSMUST00000098326.3	10982	9	84971	2860	10911	-2860	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	81257742	81253088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_81253100_81257700
ES.31259.10	chr7	-	1561	1	Intergenic	novelGene_25685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGATTGAATGTAAGT	NA	False	NA	NA	False	NA	NA	NA	81289085	81287524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81287500_81289100
ES.31259.2	chr7	-	5415	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-19	-3660	-19	3660	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAGCCTGGCAAGAA	NA	False	NA	NA	False	TATAAA	-10	NA	81356711	81255817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ES.31259.3	chr7	-	2334	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	-204	-394	-204	394	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAACTTAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	81356896	81259083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ES.31259.4	chr7	-	4814	7	NNC	ENSMUSG00000025813.15	novel	1736	9	NA	NA	7	390	intron_retention	FALSE	canonical	0	0	junction_3	14.5907124188262	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGCAGAACTTAGTGT	NA	False	NA	NA	False	NA	NA	NA	81356685	81259087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81261135_81262008_81262120_81264090_81264677_81272490_81274093_81286108_81286241_81299301_81299459_81356506
ES.31259.5	chr7	-	2199	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-175	-390	-40	390	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGCAGAACTTAGTGT	NA	False	NA	NA	False	NA	NA	NA	81356732	81259087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ES.31259.8	chr7	-	1813	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	-164	-15	-29	15	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAGTAAATACACTAT	NA	False	NA	NA	False	NA	NA	NA	81356721	81259462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ES.31259.9	chr7	-	174	1	Intergenic	novelGene_25684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCAGTAC	NA	False	NA	NA	False	NA	NA	NA	81265655	81265481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81265500_81265700
ES.3126.1	chr10	-	3961	1	FSM	ENSMUSG00000033318.8	ENSMUST00000218745.2	1449	1	-2512	0	-2512	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	75675770	75671809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75671800_75675800
ES.31260.1	chr7	-	181	1	Intergenic	novelGene_25686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGTTTCAAGTTT	2453	False	NA	NA	False	NA	NA	NA	81370034	81369853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81369900_81370000
ES.31261.1	chr7	+	187	1	Intergenic	novelGene_25687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGATTGGCCACACTC	NA	False	NA	NA	False	AAAAAG	-17	NA	81391439	81391626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81391400_81391600
ES.31262.1	chr7	+	1442	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	9	1	9	-1	multi-exon	FALSE	canonical	3	441	junction_1	195	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTAGTTTTGACAGCC	NA	False	NA	NA	False	AATAAA	-29	NA	81412681	81419238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81412805_81417274_81417472_81418116
ES.31262.2	chr7	+	539	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	29	884	29	-873	multi-exon	FALSE	canonical	3	441	junction_1	195	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCTTGTGTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	81412701	81418355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81412805_81417274_81417472_81418116
ES.31262.3	chr7	+	793	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	29	630	29	-619	multi-exon	FALSE	canonical	3	441	junction_1	195	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGGCTTTTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	81412701	81418609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81412805_81417274_81417472_81418116
ES.31262.4	chr7	+	1337	3	NNC	ENSMUSG00000038646.14	novel	1452	3	NA	NA	29	-57	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	410.5	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATGTGTGTACCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	81412701	81419171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81412805_81417292_81417472_81418116
ES.31262.5	chr7	+	674	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	37	741	37	-730	multi-exon	FALSE	canonical	3	441	junction_1	195	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTGACTTCTTTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	81412709	81418498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81412805_81417274_81417472_81418116
ES.31262.6	chr7	+	1208	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	57	187	57	-176	multi-exon	FALSE	canonical	3	441	junction_1	195	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTCGATGCTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	81412729	81419052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81412805_81417274_81417472_81418116
ES.31262.7	chr7	+	1306	2	ISM	ENSMUSG00000038646.14	ENSMUST00000118190.2	1391	3	4243	4	4243	-4	3prime_fragment	FALSE	canonical	3	831	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGGCAACTTTACCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	81417273	81419224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_81417472_81418116
ES.31263.1	chr7	-	2772	1	Antisense	novelGene_ENSMUSG00000038646.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81418452	81415680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_81415700_81418500
ES.31264.1	chr7	+	176	1	Intergenic	novelGene_25688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATTATGTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	81429193	81429369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81429200_81429400
ES.31265.1	chr7	+	217	1	Intergenic	novelGene_25689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGATTCTTGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	81437215	81437432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81437200_81437400
ES.31266.1	chr7	+	171	1	Intergenic	novelGene_25690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	81437445	81437616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81437400_81437600
ES.31267.1	chr7	-	3100	5	NNC	ENSMUSG00000025102.15	novel	504	4	NA	NA	-3	4118	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_4	96.0325465662553	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAACTCAGATTTTC	NA	False	NA	NA	False	CATAAA	-6	NA	81439229	81427811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31267.10	chr7	-	2295	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	1498	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	119.116277225239	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTGGTTGGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	81439213	81430431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439179
ES.31267.11	chr7	-	1980	4	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	18	675	intron_retention	FALSE	canonical	0	0	junction_3	138.357829156463	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTAGATTGTTGTTC	NA	False	NA	NA	False	AATATA	-25	NA	81439195	81431254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.12	chr7	-	1641	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	2	666	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGCTGTAATACTTTAGA	NA	False	NA	NA	False	AATATA	-16	NA	81439211	81431263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31267.13	chr7	-	1175	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	-2	192	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	81439219	81431737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31267.15	chr7	-	1471	4	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	44	192	intron_retention	FALSE	canonical	0	0	junction_3	138.357829156463	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATTGATAA	NA	False	NA	NA	False	NA	NA	NA	81439169	81431737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.16	chr7	-	976	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTAGCAGTTTCGAGT	NA	False	NA	99	True	AATAAA	-15	NA	81439214	81431931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31267.17	chr7	-	709	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	28	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.960359465968	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAATGTCAGTTATTTT	NA	False	NA	0	True	AGTAAA	-18	NA	81439185	81432030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81432330_81432778_81432887_81435824_81435917_81438197_81438325_81439102
ES.31267.18	chr7	-	798	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	-14	103	-14	-103	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTAATGTCAGTTATT	NA	False	NA	-2	True	AGTAAA	-16	NA	81439240	81432032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.19	chr7	-	897	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	-10	-103	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTAATGTCAGTTATT	NA	False	NA	-2	True	AGTAAA	-16	NA	81439236	81432032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31267.2	chr7	-	2981	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	4118	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAACTCAGATTTTC	NA	False	NA	NA	False	CATAAA	-6	NA	81439213	81427811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.20	chr7	-	799	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	112.09008653757	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAACTTAATGTCAGTTA	NA	False	NA	-4	True	AGTAAA	-14	NA	81439213	81432034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439072
ES.31267.21	chr7	-	607	5	NNC	ENSMUSG00000025102.15	novel	887	5	NA	NA	17	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.960359465968	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCTTCTATTCTAAG	NA	False	NA	-113	True	NA	NA	NA	81439196	81432143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81432330_81432778_81432887_81435824_81435917_81438197_81438325_81439102
ES.31267.3	chr7	-	1728	3	NNC	ENSMUSG00000025102.15	novel	451	3	NA	NA	2474	3117	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_1	94.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCATAGTGACACTGTC	NA	False	NA	NA	False	NA	NA	NA	81435938	81428812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824
ES.31267.4	chr7	-	3265	1	Genic_Genomic	ENSMUSG00000025102.15	novel	NA	NA	NA	NA	5711	2493	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	81432701	81429436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_81429400_81432700
ES.31267.5	chr7	-	1356	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	2493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.089254102005	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	81439213	81429436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.6	chr7	-	1989	4	NNC	ENSMUSG00000025102.15	novel	504	4	NA	NA	0	2348	intron_retention	FALSE	canonical	3	105	junction_1	88.8606899715629	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCAGGCGTGGTGGCGC	NA	False	NA	NA	False	ATTAAA	-15	NA	81439213	81429581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197
ES.31267.7	chr7	-	826	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	-8	1910	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.695095186813	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGCAGAGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	81439234	81430019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430321_81432778_81432887_81435824_81435953_81438197_81438325_81439072
ES.31267.8	chr7	-	765	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	4	1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.089254102005	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAAGCCTACAAC	NA	False	NA	NA	False	NA	NA	NA	81439222	81430036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ES.31267.9	chr7	-	865	5	NNC	ENSMUSG00000025102.15	novel	504	4	NA	NA	-2	1893	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_4	96.0325465662553	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAAGCCTACAAC	NA	False	NA	NA	False	NA	NA	NA	81439219	81430036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81438999
ES.31268.1	chr7	-	3450	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	308	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	81479213	81441513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.10	chr7	-	2511	5	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	370.619329636219	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479212	81441822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443394_81455502_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.12	chr7	-	3027	8	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	284.23833058092	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479213	81441822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443468_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.13	chr7	-	6907	7	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	689	junction_3	97.162092516692	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479212	81441822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81443475_81443905_81444053_81446743_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.14	chr7	-	2667	8	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-580	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	279.592414717114	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTATTTGTCACCTCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	81479759	81441823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81479632
ES.31268.15	chr7	-	5721	7	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-33	-4	intron_retention	FALSE	canonical	3	689	junction_3	95.6010227746312	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTATTTGTCACCTCT	NA	False	NA	-8	True	AATAAA	-14	NA	81479212	81441825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81443475_81443905_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.16	chr7	-	2031	5	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	23553	187	-5385	-187	3prime_fragment	FALSE	canonical	3	689	junction_4	19.536824204563	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTAACCAGTGTTGCA	NA	False	NA	NA	False	AGTAAA	-16	NA	81455626	81442008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489
ES.31268.17	chr7	-	2510	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-28	519	-28	-519	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCTTGTATAATT	NA	False	NA	NA	False	AATACA	-39	NA	81479207	81442340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.18	chr7	-	1707	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-40	1334	-40	107	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTGTGTAAATTGC	NA	False	NA	NA	False	AGTAAA	-43	NA	81479219	81443155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.19	chr7	-	1626	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-63	1438	-63	3	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTCTTGAGTATTT	NA	False	NA	0	True	CATAAA	-18	NA	81479242	81443259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.2	chr7	-	3342	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-34	-307	-34	307	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	81479213	81441514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.20	chr7	-	4274	7	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	689	junction_3	95.6010227746312	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGAGTGTCTTGAGTA	NA	False	NA	-3	True	CATAAA	-15	NA	81479202	81443262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81443475_81443905_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.21	chr7	-	4390	8	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-32	0	intron_retention	FALSE	canonical	3	37	junction_3	334.364520625411	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGAGTGTCTTGAGTA	NA	False	NA	-3	True	CATAAA	-15	NA	81479211	81443262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.22	chr7	-	1527	8	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	280.91773797716	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTTGAGTGTCTTGA	NA	False	NA	-6	True	CATAAA	-12	NA	81479213	81443265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478784
ES.31268.23	chr7	-	1709	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTTGAGTGTCTTGA	NA	False	NA	-6	True	CATAAA	-12	NA	81479224	81443265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.24	chr7	-	1392	7	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	269.715693936329	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTTGAGTGTCTTGA	NA	False	NA	-6	True	CATAAA	-12	NA	81479212	81443265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81465662_81465769_81467942_81468100_81478720
ES.31268.25	chr7	-	838	4	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-31	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	350.561771383526	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATAGTTTGAGTGTCT	NA	False	NA	-9	True	CATAAA	-9	NA	81479210	81443268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81443982_81468033_81468100_81478720
ES.31268.26	chr7	-	5002	1	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-2213	2892	mono-exon	FALSE	NA	NA	NA	NA	NA	476	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGGTCTGATAATGATT	3041	False	NA	NA	False	NA	NA	NA	81452454	81447452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81447500_81452500
ES.31268.27	chr7	-	4136	3	FSM	ENSMUSG00000025103.9	ENSMUST00000208566.2	335	3	-409	-3392	-33	2892	multi-exon	FALSE	canonical	2	68	junction_2	310.5	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGGTCTGATAATGATT	NA	False	NA	NA	False	NA	NA	NA	81479212	81447452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81450899_81455489_81455688_81478720
ES.31268.28	chr7	-	4394	5	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-28	5631	-28	2892	5prime_fragment	FALSE	canonical	3	689	junction_1	107.978007019948	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGGTCTGATAATGATT	NA	False	NA	NA	False	NA	NA	NA	81479207	81447452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.29	chr7	-	3175	1	Intergenic	novelGene_25691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGCACTGTGACAAGAGAA	NA	False	NA	NA	False	ATTAAA	-11	NA	81465609	81462434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81462400_81465600
ES.31268.3	chr7	-	3202	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-55	307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.177454905557	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	81479234	81441514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81442572_81442732_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.30	chr7	-	185	1	Intergenic	novelGene_25692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAGAAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	81465414	81465229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81465200_81465400
ES.31268.31	chr7	-	6343	1	Genic_Genomic	ENSMUSG00000025103.9	novel	NA	NA	NA	NA	-33	-22025	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATACACCCACACCAC	NA	False	NA	NA	False	NA	NA	NA	81479212	81472869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_81472900_81479200
ES.31268.32	chr7	-	1759	1	Genic_Genomic	ENSMUSG00000025103.9	novel	NA	NA	NA	NA	-33	-26609	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGTCTACAGCATT	NA	False	NA	NA	False	ATTAAA	-7	NA	81479212	81477453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_81477500_81479200
ES.31268.4	chr7	-	3166	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	-77	-88	-77	88	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATTTTAACTAATATT	NA	False	NA	84	True	ATTAAA	-18	NA	81479256	81441733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.5	chr7	-	3329	10	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-39	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	372.865778650829	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACCTCTCTTTTTCT	NA	False	NA	0	True	AATAAA	-22	NA	81479218	81441817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81469186_81469365_81478720
ES.31268.6	chr7	-	9536	6	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	30	0	intron_retention	FALSE	canonical	3	689	junction_2	103.712294353177	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479149	81441821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81443475_81443905_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.7	chr7	-	3144	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479215	81441821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.8	chr7	-	3003	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-40	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.177454905557	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479219	81441822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81442341_81442377_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31268.9	chr7	-	2863	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.177454905557	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	81479213	81441822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_81442755_81442925_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ES.31269.1	chr7	+	1893	11	NNC	ENSMUSG00000038623.10	novel	750	4	NA	NA	-23391	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.5736384915046	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGAAGATAAACTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	81485357	81533809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81485452_81496839_81496963_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.2	chr7	+	2271	11	NNC	ENSMUSG00000038623.10	novel	750	4	NA	NA	-471	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.20923449587424	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAACCCTGACTTAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	81508277	81534184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81508361_81512897_81513002_81514994_81515093_81518388_81518493_81519225_81519361_81520444_81520528_81521116_81521241_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.3	chr7	+	2522	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	67	-363	48	0	multi-exon	FALSE	canonical	3	11	junction_7	3.33703498170693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAACCCTGACTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	81508815	81534182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.4	chr7	+	1493	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	81	652	-36	0	multi-exon	FALSE	canonical	3	11	junction_7	3.33703498170693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTCTCTGACCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	81508829	81533167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.5	chr7	+	2128	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	91	7	-26	-7	multi-exon	FALSE	canonical	3	11	junction_7	3.33703498170693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGATAAACTTTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	81508839	81533812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.6	chr7	+	1709	10	FSM	ENSMUSG00000038623.10	ENSMUST00000119543.2	1066	10	1	-644	1	-8	multi-exon	FALSE	canonical	1	1	junction_1	6.07565471755214	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGATAAACTTTATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	81512435	81533811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81512467_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.7	chr7	+	2318	8	NNC	ENSMUSG00000038623.10	novel	750	4	NA	NA	-2667	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.71785602748271	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAACCCTGACTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	81516813	81534182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81517285_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ES.31269.8	chr7	+	4294	1	NIC	ENSMUSG00000038623.10	novel	2226	10	NA	NA	5633	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTCTCTGACCTGTT	5291	False	NA	NA	False	AATAAA	-13	NA	81528873	81533167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81528900_81533200
ES.31269.9	chr7	+	3483	1	NIC	ENSMUSG00000038623.10	novel	2226	10	NA	NA	7096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTATTAATTTTGAAG	6754	False	NA	NA	False	AATAAA	-25	NA	81530336	81533819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81530300_81533800
ES.3127.1	chr10	+	179	1	Intergenic	novelGene_2450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75679956	75680135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75680000_75680100
ES.31270.1	chr7	+	158	1	Intergenic	novelGene_25694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAATTTAAA	3561	False	NA	NA	False	NA	NA	NA	81575430	81575588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81575400_81575600
ES.31271.1	chr7	-	208	1	Intergenic	novelGene_25693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATAAGATTGATAGGCC	NA	False	NA	NA	False	NA	NA	NA	81502368	81502160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81502200_81502400
ES.31272.1	chr7	-	2591	1	Antisense	novelGene_ENSMUSG00000038623.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGCCACTCCGTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	81509156	81506565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_81506600_81509200
ES.31273.2	chr7	-	6072	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-185	0	-185	0	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTGTGACTGTCAGAA	NA	False	NA	-2	True	AATAAA	-14	NA	81584406	81530998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ES.31273.3	chr7	-	5358	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-137	666	-137	-666	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTGTTGACAAGGAC	NA	False	NA	NA	False	AATAAA	-12	NA	81584358	81531664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ES.31273.4	chr7	-	3267	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	15	2605	1	-2605	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTTGAATCAATTTAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	81584206	81533603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ES.31273.5	chr7	-	3309	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-223	2801	-223	-2801	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTATTGAAGGTATAC	NA	False	NA	NA	False	AATAAA	-25	NA	81584444	81533799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ES.31273.6	chr7	-	2727	5	NIC	ENSMUSG00000025104.14	novel	5887	6	NA	NA	206	-2801	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.0190871022924	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTATTGAAGGTATAC	NA	False	NA	NA	False	AATAAA	-25	NA	81584001	81533799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81535832_81543546_81543694_81549421_81549578_81555307_81555385_81583686
ES.31273.7	chr7	-	2257	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	-137	3767	-137	-3767	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGAGTAAGGTTTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	81584358	81534765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ES.31273.8	chr7	-	1282	1	NIC	ENSMUSG00000025104.14	novel	5887	6	NA	NA	47723	-3768	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGGAGTAAGGTTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	81536048	81534766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_81534800_81536000
ES.31273.9	chr7	-	4116	4	FSM	ENSMUSG00000025104.14	ENSMUST00000149288.2	2320	4	-370	-1426	66	1426	multi-exon	FALSE	canonical	3	39	junction_3	4.10960933531265	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGGTTTCTCTGTGTA	NA	False	NA	NA	False	AATAAA	-29	NA	81584141	81546132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_81549578_81550032_81550172_81555307_81555385_81583686
ES.31274.1	chr7	-	169	1	Intergenic	novelGene_25695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81665946	81665777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81665800_81665900
ES.31275.1	chr7	-	1954	2	Intergenic	novelGene_25696	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCATTTTTGGTCACC	NA	False	NA	NA	False	NA	NA	NA	81814527	81760982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81762785_81814375
ES.31275.2	chr7	-	1442	2	Intergenic	novelGene_25697	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTAATTTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	81814530	81761497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81762785_81814375
ES.31275.3	chr7	-	1260	2	Intergenic	novelGene_25698	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTATCTGCATTAATC	NA	False	NA	NA	False	AATAAA	-24	NA	81814540	81761689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81762785_81814375
ES.31275.4	chr7	-	1925	1	Intergenic	novelGene_25699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATACAAGGATGGAAACCA	NA	False	NA	NA	False	NA	NA	NA	81804097	81802172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81802200_81804100
ES.31276.1	chr7	+	1670	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	-27	4	-27	-4	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTGGTTATTTTCAA	NA	False	NA	13	True	AATAAA	-20	NA	81824516	81956623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.10	chr7	+	3641	6	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	5	30	intron_retention	FALSE	canonical	0	0	junction_5	127.760713836453	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGGCCTGGGTAGTCCT	NA	False	NA	NA	False	AGTAAA	-12	NA	81824594	81956466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81824768_81909339_81909409_81917487_81920125_81923068_81923203_81925334_81925494_81955997
ES.31276.12	chr7	+	1662	10	NNC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	133.849002818682	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81824595	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81935178_81935256_81955997
ES.31276.13	chr7	+	1558	9	NIC	ENSMUSG00000030638.14	novel	1486	9	NA	NA	5	-10	combination_of_known_junctions	FALSE	canonical	2	15	junction_2	130.244961514832	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81824608	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81824768_81909339_81909409_81917494_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.14	chr7	+	1618	9	NIC	ENSMUSG00000030638.14	novel	685	6	NA	NA	-44	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	114.944551850012	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81824859	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81825065_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.15	chr7	+	1742	10	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	29441	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.296466190859	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCATAAAAGACTGGTTA	NA	False	NA	6	True	AATAAA	-13	NA	81854422	81956616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81854485_81895377_81895646_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.16	chr7	+	1758	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	37443	-10	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	107.755437797821	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	3004	False	NA	7	True	AATAAA	-14	NA	81862424	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81862770_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.17	chr7	+	1937	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-45214	-4	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	110.874295375439	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTGGTTATTTTCAA	1832	False	NA	13	True	AATAAA	-20	NA	81874879	81956623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81875398_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.18	chr7	+	1755	10	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-40881	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	158.735279282486	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	6165	False	NA	7	True	AATAAA	-14	NA	81879212	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81879492_81909339_81909409_81909824_81909888_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.19	chr7	+	1650	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-40847	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	155.83545007475	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTGGTTATTTTCAA	6199	False	NA	13	True	AATAAA	-20	NA	81879246	81956623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81879492_81909339_81909409_81917494_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.20	chr7	+	1529	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-40725	-10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	133.167188150835	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	6321	False	NA	7	True	AATAAA	-14	NA	81879368	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81879492_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.21	chr7	+	2978	3	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-32552	1049	intron_retention	FALSE	canonical	2	2	junction_1	149.5	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTTCCATCTCCATG	NA	False	NA	NA	False	AATAAA	-18	NA	81887541	81920295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81887643_81909339_81909409_81917487
ES.31276.22	chr7	+	1511	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-32552	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	114.317266849763	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTCATAAAAGACTGGT	NA	False	NA	4	True	AATAAA	-11	NA	81887541	81956614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81887643_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.23	chr7	+	1533	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30778	-6	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	122.938437337555	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGACTGGTTATTTTC	NA	False	NA	11	True	AATAAA	-18	NA	81889315	81956621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.24	chr7	+	1540	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30776	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	100.011249367259	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTGGTTATTTTCAA	NA	False	NA	13	True	AATAAA	-20	NA	81889317	81956623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.25	chr7	+	1553	10	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30760	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	147.75806050583	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81889333	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81935178_81935214_81955997
ES.31276.26	chr7	+	3404	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-27183	-1888	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.675177187963	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACTGTCCCAGAGTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	81892910	81954407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81892993_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81951871
ES.31276.27	chr7	+	1471	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-12684	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.944551850012	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTCATAAAAGACTGGT	NA	False	NA	4	True	AATAAA	-11	NA	81907409	81956614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81907471_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.28	chr7	+	3333	8	NNC	ENSMUSG00000030638.14	novel	1489	9	NA	NA	-10755	-1885	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	115.702644917116	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTCCCAGAGTTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	81909338	81954410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81951871
ES.31276.3	chr7	+	3493	8	NNC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-10	-1885	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	145.525507968149	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTCCCAGAGTTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	81824533	81954410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81824768_81909339_81909409_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81951871
ES.31276.30	chr7	+	979	1	Intergenic	novelGene_25701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTCACTGTGTAGTAT	NA	False	NA	NA	False	NA	NA	NA	81914232	81915211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_81914200_81915200
ES.31276.31	chr7	+	3153	3	ISM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	106246	10	10850	-10	3prime_fragment	FALSE	canonical	3	343	junction_1	15	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81930943	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_81933367_81934228_81934339_81955997
ES.31276.4	chr7	+	1639	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	-163	10	-9	-10	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAAAGACTGGTTAT	NA	False	NA	7	True	AATAAA	-14	NA	81824534	81956617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.5	chr7	+	1480	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	8	159	8	32	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCTGGGTAGTCCTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	81824551	81956468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.6	chr7	+	1544	8	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-22	-6	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	114.240884064492	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGACTGGTTATTTTC	NA	False	NA	11	True	AATAAA	-18	NA	81824567	81956621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81824768_81909339_81909409_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.7	chr7	+	4043	8	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	279	junction_1	31.6311652052987	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824567	81956627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_81824768_81909339_81909409_81917487_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ES.31276.8	chr7	+	1441	9	NNC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	-6	2276	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	109.795264014437	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACCAGTGTGATCTGC	NA	False	NA	NA	False	AATGAA	-7	NA	81824583	81935642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81935178
ES.31276.9	chr7	+	3502	9	NNC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	4	-1889	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	108.231161755753	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACTGTCCCAGAGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	81824593	81954406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81951871
ES.31277.1	chr7	-	8099	1	Intergenic	novelGene_25700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6807	False	NA	NA	False	NA	NA	NA	81856511	81848412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_81848400_81856500
ES.31278.1	chr7	-	2199	4	NNC	ENSMUSG00000038570.16	novel	2026	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAACAGCCTCAATTGTA	NA	False	NA	NA	False	AATACA	-40	NA	82297762	82291348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_82293058_82294061_82294209_82294857_82295038_82297599
ES.31278.2	chr7	-	440	2	FSM	ENSMUSG00000038570.16	ENSMUST00000126478.2	430	2	-6	-4	-6	4	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGTACCTATCCTATG	NA	False	NA	4	True	AATAAA	-31	NA	82297742	82295371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_82295669_82297599
ES.31279.1	chr7	+	3614	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	-11	5	-11	-5	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAACCGTTTGTTTAA	NA	False	NA	33	True	AATAAA	-38	NA	82297810	82427055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.10	chr7	+	5034	16	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-15	23845	-3	-23845	intron_retention	FALSE	canonical	3	73	junction_1	23.4676136172575	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAATCTTGTAAATAC	NA	False	NA	NA	False	AATATA	-42	NA	82297833	82403215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999
ES.31279.11	chr7	+	3620	20	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	1	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	33.2272457705396	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGAACATAACTTCCA	NA	False	NA	19	True	AATAAA	-24	NA	82297837	82427041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341841_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.12	chr7	+	3451	19	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	1	-27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.2230091202147	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGCATCAGAGAACAT	NA	False	NA	11	True	AATAAA	-16	NA	82297837	82427033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297887_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323612_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.13	chr7	+	2262	17	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	0	23952	0	-23952	5prime_fragment	FALSE	canonical	3	73	junction_1	22.9713646470992	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATTTCATACATTTG	NA	False	NA	NA	False	CATAAA	-45	NA	82297848	82403108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781
ES.31279.14	chr7	+	4046	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	3	-439	3	439	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCTCTGCCATTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	82297851	82427499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.15	chr7	+	1045	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGAGTGGCCTGTGGCT	NA	False	NA	NA	False	AATAAA	-13	NA	82297857	82308231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
ES.31279.16	chr7	+	4169	20	Fusion	ENSMUSG00000108991.2_ENSMUSG00000038563.15	novel	1537	3	NA	NA	55	-19	multi-exon	FALSE	non_canonical	0	0	junction_1	32.4765417151034	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGAACATAACTTCCA	NA	False	NA	19	True	AATAAA	-24	NA	82297903	82427041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_82298224_82298437_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.17	chr7	+	3701	20	Fusion	ENSMUSG00000108991.2_ENSMUSG00000038563.15	novel	1537	3	NA	NA	91	-28	multi-exon	FALSE	canonical	0	0	junction_1	32.4765417151034	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGGCATCAGAGAACA	NA	False	NA	10	True	AATAAA	-15	NA	82297939	82427032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_82298097_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.18	chr7	+	2436	14	ISM	ENSMUSG00000038563.15	ENSMUST00000125245.8	2453	15	893	0	389	0	3prime_fragment	FALSE	canonical	3	73	junction_8	21.5532915977635	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTACTGGTTTGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	82298729	82347892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
ES.31279.19	chr7	+	1552	4	NNC	ENSMUSG00000038563.15	novel	755	7	NA	NA	389	-4681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.9672681564976	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTGTGTCAAATTTT	NA	False	NA	NA	False	NA	NA	NA	82298729	82319071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82298840_82301088_82301157_82307264_82307350_82317782
ES.31279.2	chr7	+	1060	5	NNC	ENSMUSG00000038563.15	novel	755	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	64.6935081750866	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGAGTGGCCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-14	NA	82297814	82308232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82307474
ES.31279.20	chr7	+	885	1	FSM	ENSMUSG00000108984.2	ENSMUST00000208664.2	2194	1	-729	2038	-729	-2038	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82364070	82364955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82364100_82365000
ES.31279.3	chr7	+	2475	15	FSM	ENSMUSG00000038563.15	ENSMUST00000125245.8	2453	15	-22	0	-7	0	multi-exon	FALSE	canonical	3	42	junction_1	27.9482028190781	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTACTGGTTTGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	82297814	82347892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
ES.31279.4	chr7	+	2453	18	NNC	ENSMUSG00000038563.15	novel	3608	20	NA	NA	-5	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	37.0730131564494	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGCATCAGAGAACATAA	NA	False	NA	13	True	AATAAA	-18	NA	82297816	82427035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347117_82412388_82412623_82421664_82421850_82426698
ES.31279.5	chr7	+	3606	20	NNC	ENSMUSG00000038563.15	novel	3608	20	NA	NA	-5	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	35.4268001906064	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAACATAACTTCCAAAC	NA	False	NA	22	True	AATAAA	-27	NA	82297816	82427044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341661_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.6	chr7	+	3568	20	NNC	ENSMUSG00000038563.15	novel	3608	20	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	34.7098778918725	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCAAACCGTTTGTT	NA	False	NA	30	True	AATAAA	-35	NA	82297816	82427052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323612_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.7	chr7	+	3639	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	-32	3	-5	-3	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACCGTTTGTTTAATT	NA	False	NA	35	True	AATAAA	-40	NA	82297816	82427057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.8	chr7	+	4403	21	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	2	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	39.948560674948	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGAGAACATAACTTC	NA	False	NA	17	True	AATAAA	-22	NA	82297823	82427039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82331120_82331249_82331603_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.31279.9	chr7	+	3599	20	NNC	ENSMUSG00000038563.15	novel	3608	20	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4765417151034	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACTTCCAAACCGTTT	NA	False	NA	27	True	AATAAA	-32	NA	82297832	82427049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82297871_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ES.3128.1	chr10	-	334	1	Intergenic	novelGene_2451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	75683156	75682822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75682800_75683200
ES.3128.2	chr10	-	231	1	Intergenic	novelGene_2452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCAGCACTTGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	75683157	75682926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75682900_75683200
ES.31280.1	chr7	-	175	1	Intergenic	novelGene_25702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGGGTGTCAG	8516	False	NA	NA	False	NA	NA	NA	82351147	82350972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_82351000_82351100
ES.31281.1	chr7	-	2682	1	Intergenic	novelGene_25703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAATGACGTAAGC	NA	False	NA	NA	False	NA	NA	NA	82360818	82358136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_82358100_82360800
ES.31282.1	chr7	-	4565	1	Antisense	novelGene_ENSMUSG00000038563.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82415028	82410463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_82410500_82415000
ES.31283.1	chr7	+	1544	4	Intergenic	novelGene_25704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	82458558	82461182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_82459136_82459220_82459590_82460326_82460540_82460797
ES.31284.1	chr7	+	175	1	Intergenic	novelGene_25705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGGGATAATTT	NA	False	NA	NA	False	NA	NA	NA	82482295	82482470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_82482300_82482500
ES.31285.1	chr7	+	3139	3	NNC	ENSMUSG00000057706.8	novel	3355	2	NA	NA	-999	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTATGGTGACTT	NA	False	NA	NA	False	AATAAA	-15	NA	82515541	82520779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82515779_82517049_82517136_82517963
ES.31285.2	chr7	+	2994	3	NNC	ENSMUSG00000057706.8	novel	3355	2	NA	NA	-199	56	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTATGGTGACTT	NA	False	NA	NA	False	AATAAA	-15	NA	82516341	82520779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_82516434_82517049_82517136_82517963
ES.31285.3	chr7	+	3468	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	-57	-56	-57	56	multi-exon	FALSE	canonical	3	9	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTATGGTGACTT	NA	False	NA	NA	False	AATAAA	-15	NA	82516483	82520779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_82517136_82517963
ES.31286.1	chr7	-	158	1	Intergenic	novelGene_25706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	82623683	82623525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_82623500_82623700
ES.31287.1	chr7	+	179	1	Intergenic	novelGene_25707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAATAGACTTTTT	NA	False	NA	NA	False	NA	NA	NA	82640264	82640443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_82640300_82640400
ES.31288.1	chr7	+	1803	2	Genic_Genomic	ENSMUSG00000108831.2	novel	2602	1	NA	NA	-3042	-1069	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCTTGGGAAGCTAGT	NA	False	NA	NA	False	AATAAA	-44	NA	83058142	83062717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_83058308_83061079
ES.31288.2	chr7	+	3017	2	Genic_Genomic	ENSMUSG00000108831.2	novel	2602	1	NA	NA	-3042	145	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACCTGTTTACCTGTGT	NA	False	NA	NA	False	NA	NA	NA	83058142	83063931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_83058308_83061079
ES.31289.1	chr7	+	4323	22	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17027	997	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.61688222172078	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTCCTCTACTATT	NA	False	NA	NA	False	TTTAAA	-18	NA	83217107	83273152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.10	chr7	+	4181	22	NNC	ENSMUSG00000038540.15	novel	3306	22	NA	NA	-17026	997	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.39614202388745	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTCCTCTACTATT	NA	False	NA	NA	False	TTTAAA	-18	NA	83217108	83273152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83271311
ES.31289.11	chr7	+	6981	21	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17026	1238	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	3.01454805899657	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTTATTTTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	83217108	83276060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.12	chr7	+	10144	19	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17025	1237	intron_retention	FALSE	canonical	0	0	junction_16	3.33703498170693	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTCTTTATTTTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	83217109	83276059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83261771_83264120_83264232_83265065_83265192_83265940_83266024_83267336_83267380_83269106_83269363_83271311
ES.31289.13	chr7	+	7085	22	NNC	ENSMUSG00000038540.15	novel	3306	22	NA	NA	-17023	1237	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.39614202388745	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTCTTTATTTTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	83217111	83276059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83271311
ES.31289.14	chr7	+	2504	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	-22	1	-22	-1	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTTGAGTTCCTCATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	83281144	83291535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ES.31289.16	chr7	+	1771	4	NIC	ENSMUSG00000046027.18	novel	897	5	NA	NA	16	883	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	82.8170674841042	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGGCCAGGTGGTTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	83281182	83288166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_83281348_83282337_83282471_83285958_83286077_83286811
ES.31289.17	chr7	+	1240	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	32	1211	-9	-1211	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGATCTCTTCCATC	NA	False	NA	38	True	TTTAAA	-40	NA	83281198	83290325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ES.31289.18	chr7	+	2399	6	NNC	ENSMUSG00000046027.18	novel	2832	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	71.3649774048868	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTATCTTGAGTTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	83281207	83291530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289666
ES.31289.19	chr7	+	2392	6	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	68.860438569617	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGTTCCTCATTTAC	NA	False	NA	NA	False	ATTAAA	-24	NA	83281207	83291537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281297_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ES.31289.2	chr7	+	4951	22	NNC	ENSMUSG00000038540.15	novel	3306	22	NA	NA	-17027	991	intron_retention	FALSE	canonical	2	3	junction_1	2.51616091688055	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATATTTCTGTCTCCTCT	NA	False	NA	NA	False	TTTAAA	-12	NA	83217107	83273146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.20	chr7	+	2342	6	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	83.9261580200119	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTATCTTGAGTTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	83281209	83291530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281297_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289670
ES.31289.21	chr7	+	1053	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	43	1387	2	-1387	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAAGTCCTGCTTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	83281209	83290149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ES.31289.22	chr7	+	3953	5	FSM	ENSMUSG00000046027.18	ENSMUST00000150174.8	897	5	-14	-3042	2	-1211	multi-exon	FALSE	canonical	3	162	junction_4	16.0837651064668	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGATCTCTTCCATC	NA	False	NA	38	True	TTTAAA	-40	NA	83281209	83290325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811
ES.31289.23	chr7	+	2958	5	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	2	490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.6796358535679	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATATA	-29	NA	83281209	83292026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281463_83282337_83282471_83285958_83286077_83286811_83286906_83289666
ES.31289.24	chr7	+	1192	6	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	2	-1211	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	71.3649774048868	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGATCTCTTCCATC	NA	False	NA	38	True	TTTAAA	-40	NA	83281209	83290325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289666
ES.31289.25	chr7	+	5646	5	FSM	ENSMUSG00000046027.18	ENSMUST00000150174.8	897	5	-7	-4742	-7	489	multi-exon	FALSE	canonical	3	162	junction_4	16.0837651064668	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCAGTTGTTTGTTTGTT	NA	False	NA	NA	False	AATATA	-28	NA	83281216	83292025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811
ES.31289.26	chr7	+	2821	6	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	2	490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.5510706924107	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATATA	-29	NA	83281225	83292026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281348_83281943_83281994_83282337_83282378_83285958_83286077_83286811_83286906_83289629
ES.31289.27	chr7	+	2306	5	NNC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.5541214704868	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTATCTTGAGTTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	83281251	83291530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83281348_83282337_83282435_83285958_83286077_83286811_83286906_83289629
ES.31289.28	chr7	+	3151	3	ISM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	2537	1223	1943	-1223	3prime_fragment	FALSE	canonical	3	154	junction_2	4	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAATCTACCGTTTGTG	NA	False	NA	26	True	TTTAAA	-28	NA	83283703	83290313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_83286077_83286811_83286906_83289629
ES.31289.29	chr7	+	4413	1	NIC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	5360	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATCTTGAGTTCCTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	83287120	83291533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_83287100_83291500
ES.31289.3	chr7	+	4065	21	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17027	995	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.55489725820824	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTCCTCTACTA	NA	False	NA	NA	False	TTTAAA	-16	NA	83217107	83273150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83271311
ES.31289.4	chr7	+	4072	21	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17027	995	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	3.01454805899657	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTCTCCTCTACTA	NA	False	NA	NA	False	TTTAAA	-16	NA	83217107	83273150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.5	chr7	+	4433	23	NNC	ENSMUSG00000038540.15	novel	6221	23	NA	NA	-17026	993	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.46630181204555	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTCTGTCTCCTCTAC	NA	False	NA	NA	False	TTTAAA	-14	NA	83217108	83273148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.6	chr7	+	5472	27	Fusion	ENSMUSG00000038540.15_ENSMUSG00000046027.18	novel	2483	6	NA	NA	-17026	1	multi-exon	FALSE	canonical	0	0	junction_21	68.709576604428	153	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGTTCCTCATTTAC	NA	False	NA	NA	False	ATTAAA	-24	NA	83217108	83291537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_83217217_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311_83272111_83281209_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ES.31289.7	chr7	+	7345	23	NNC	ENSMUSG00000038540.15	novel	6221	23	NA	NA	-17026	1238	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.46630181204555	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTTATTTTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	83217108	83276060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.8	chr7	+	7094	22	NNC	ENSMUSG00000038540.15	novel	3306	22	NA	NA	-17026	1236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	2.86031569860594	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTCTTTATTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	83217108	83276058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83234273_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83269106_83269363_83271311
ES.31289.9	chr7	+	6827	20	NNC	ENSMUSG00000038540.15	novel	627	3	NA	NA	-17026	1238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.88082782808505	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTTTATTTTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	83217108	83276060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83217217_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83271311
ES.3129.1	chr10	-	799	4	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-2037	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	7244.40645525145	860	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGCTTCTGCTTCCTT	NA	False	NA	-5	True	AATAAA	-23	NA	75698111	75695181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695520_75695694_75695894_75696241_75698027
ES.3129.11	chr10	-	993	4	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-5638	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7250.81531047831	861	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACGGTTGCCTCAGCTTC	NA	False	NA	-14	True	AATAAA	-14	NA	75701712	75695190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695520_75695694_75695894_75696364_75701548
ES.3129.12	chr10	-	751	4	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-2037	-11	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	7245.77975253335	860	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGACCACGGTTGCCT	NA	False	NA	-21	True	AATAAA	-7	NA	75698111	75695197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695520_75695694_75695894_75696209_75698027
ES.3129.13	chr10	-	3641	1	Intergenic	novelGene_2453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAATCCGACTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	75701709	75698068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75698100_75701700
ES.3129.14	chr10	-	725	1	Intergenic	novelGene_2454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTTTGTAGCACCTT	NA	False	NA	NA	False	NA	NA	NA	75701712	75700987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75701000_75701700
ES.3129.3	chr10	-	564	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8528	859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTTGCCTCAGCTTCTGC	NA	False	NA	-11	True	AATAAA	-17	NA	75696101	75695187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695526_75695694_75695894
ES.3129.4	chr10	-	414	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	162	-1	at_least_one_novel_splicesite	FALSE	canonical	2	1646	junction_2	5586	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTTGCCTCAGCTTCTGC	NA	False	NA	-11	True	AATAAA	-17	NA	75695864	75695187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695520_75695694_75695813
ES.3129.7	chr10	-	866	1	NIC	ENSMUSG00000033307.8	novel	544	3	NA	NA	20	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	859	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTTGCCTCAGCTTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	75696054	75695188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75695200_75696100
ES.3129.8	chr10	-	567	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6409	859	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTTGCCTCAGCTTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	75696109	75695188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75695378_75695520_75695684_75695894
ES.31290.1	chr7	-	198	1	ISM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	12297	904	12259	-904	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTGCAAGAGAACACTG	NA	False	NA	NA	False	NA	NA	NA	83268791	83268593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_83268600_83268800
ES.31291.1	chr7	-	1460	1	ISM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	9593	2346	9555	-2346	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGCAGGGGGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	83271495	83270035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_83270000_83271500
ES.31292.1	chr7	-	982	5	NNC	ENSMUSG00000001741.13	novel	3183	7	NA	NA	6356	-764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCCCAAGAAACAAATG	NA	False	NA	NA	False	AATAAA	-14	NA	83298177	83292819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_83293285_83295035_83295159_83295509_83295769_83297922_83298025_83298144
ES.31293.1	chr7	+	985	2	Genic_Genomic	ENSMUSG00000063902.14	novel	1378	1	NA	NA	845	511	multi-exon	FALSE	canonical	0	0	junction_1	0	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTTGGA	NA	False	NA	13	True	AATAAA	-13	NA	83405956	83407000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_83406475_83406533
ES.31293.2	chr7	+	989	1	FSM	ENSMUSG00000063902.14	ENSMUST00000051522.16	1378	1	900	-511	900	511	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAGTTGGA	NA	False	NA	13	True	AATAAA	-13	NA	83406011	83407000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83406000_83407000
ES.31294.1	chr7	+	4108	1	Genic_Genomic	ENSMUSG00000038503.16	novel	NA	NA	NA	NA	-1834	-11028	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTTCTTTTGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	83531839	83535947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_83531800_83535900
ES.31295.1	chr7	-	4411	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	28	-6	28	6	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTCACAGTTGTCTCA	NA	False	NA	NA	False	ATTAAA	-24	NA	83533485	83529074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83529100_83533500
ES.31295.2	chr7	-	3845	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	4	584	4	-584	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTAATAGTGTGTAT	NA	False	NA	NA	False	TATAAA	-34	NA	83533509	83529664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83529700_83533500
ES.31295.3	chr7	-	3521	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	54	858	54	-858	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGGGAGTTTATGGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	83533459	83529938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83529900_83533500
ES.31295.4	chr7	-	3774	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-523	1182	-523	-1182	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTGTGGGGTGCTGCC	NA	False	NA	NA	False	ATTAAA	-11	NA	83534036	83530262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83530300_83534000
ES.31295.5	chr7	-	3348	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-556	1641	-556	-1641	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGCAGTTACTGTCTTT	NA	False	NA	-7	True	ATTAAA	-22	NA	83534069	83530721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83530700_83534100
ES.31295.6	chr7	-	2267	2	Genic_Genomic	ENSMUSG00000070462.5	novel	4433	1	NA	NA	39	-1646	multi-exon	FALSE	non_canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTTTCGCAGTTACTG	NA	False	NA	-12	True	ATTAAA	-17	NA	83533474	83530726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_83532950_83533430
ES.31295.7	chr7	-	2810	2	Genic_Genomic	ENSMUSG00000070462.5	novel	4433	1	NA	NA	-414	-1647	multi-exon	FALSE	canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTTTTCGCAGTTACT	NA	False	NA	-13	True	ATTAAA	-16	NA	83533927	83530727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_83533411_83533800
ES.31296.1	chr7	+	171	1	Intergenic	novelGene_25708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCAAGTATGCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	83539996	83540167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_83540000_83540200
ES.31297.1	chr7	+	2181	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	-31	2342	-31	1110	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTCCTCCAGTGAT	NA	False	NA	34	True	AATAAA	-29	NA	83541176	83548398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.10	chr7	+	4225	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	264	3	-66	-3	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTTTATTCTGTGCG	NA	False	NA	NA	False	TTTAAA	-38	NA	83541471	83550737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.11	chr7	+	6909	1	FSM	ENSMUSG00000108878.2	ENSMUST00000208403.2	4136	1	6	-2779	6	2779	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541475	83548384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541500_83548400
ES.31297.12	chr7	+	3847	2	NNC	ENSMUSG00000038503.16	novel	4492	3	NA	NA	-58	1094	intron_retention	FALSE	non_canonical	0	0	junction_1	0	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCAGTGATAGGTATAT	NA	False	NA	18	True	AATAAA	-13	NA	83541479	83548382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83541682_83544737
ES.31297.13	chr7	+	2994	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	274	1224	-56	-1224	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTACAGATTCCTTATAG	NA	False	NA	NA	False	ATTAAA	-14	NA	83541481	83549516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.16	chr7	+	4577	1	Genic_Genomic	ENSMUSG00000038503.16	novel	NA	NA	NA	NA	5037	3134	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGATTGCTGTGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	83549297	83553874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_83549300_83553900
ES.31297.2	chr7	+	6647	2	NNC	ENSMUSG00000038503.16	novel	815	2	NA	NA	-4	1097	intron_retention	FALSE	non_canonical	0	0	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGATAGGTATATTCT	NA	False	NA	21	True	AATAAA	-16	NA	83541203	83548385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83541288_83541822
ES.31297.3	chr7	+	3985	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	250	257	-80	-257	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACCCAGCCTCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	83541457	83550483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.4	chr7	+	3244	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	251	997	-79	-997	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTATGGCCTTTTCT	NA	False	NA	NA	False	AAAAAG	-31	NA	83541458	83549743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.5	chr7	+	1080	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	263	3149	-67	303	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAACTTGACTGAAGCG	NA	False	NA	NA	False	NA	NA	NA	83541470	83547591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.6	chr7	+	1480	4	NNC	ENSMUSG00000038503.16	novel	489	4	NA	NA	-67	1096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	621.56951877217	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541470	83548384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83541684_83544737_83544971_83546957_83547486_83547878
ES.31297.7	chr7	+	4543	3	NNC	ENSMUSG00000038503.16	novel	4492	3	NA	NA	-67	1102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	656	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGGTATATTCTGTCCT	NA	False	NA	26	True	AATAAA	-21	NA	83541470	83548390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83544348_83544737_83544971_83546957
ES.31297.8	chr7	+	2037	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	264	2191	-66	1261	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGTGACTTGTGATGAT	NA	False	NA	NA	False	AAAAAG	-21	NA	83541471	83548549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_83541684_83544737_83544971_83546957
ES.31297.9	chr7	+	2921	4	NNC	ENSMUSG00000038503.16	novel	489	4	NA	NA	-66	-1222	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	621.56951877217	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGATTCCTTATAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	83541471	83549518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_83541684_83544737_83544971_83546957_83547629_83547713
ES.31298.1	chr7	+	172	1	Intergenic	novelGene_25709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83566164	83566336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_83566200_83566300
ES.31299.1	chr7	-	6647	30	NNC	ENSMUSG00000052353.14	novel	7111	29	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.11417202906231	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTCTTGTCTGCTTGTTT	9134	False	NA	NA	False	ATTAAA	-16	NA	83735709	83582065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_83582698_83583159_83584957_83586594_83586696_83591213_83591372_83592826_83592914_83593089_83593295_83596355_83596542_83597787_83598000_83600610_83600827_83601994_83602176_83604428_83604585_83604665_83604702_83606795_83606928_83607716_83607803_83610750_83610880_83612252_83612323_83613193_83613400_83622380_83622591_83624247_83624424_83631399_83631592_83632341_83632475_83636545_83636668_83637167_83637264_83638340_83638412_83641225_83641406_83646429_83646667_83647698_83647838_83648316_83648464_83652519_83652630_83735465
ES.31299.2	chr7	-	4242	22	ISM	ENSMUSG00000052353.14	ENSMUST00000150495.8	4287	24	-34	3936	-34	1	5prime_fragment	FALSE	canonical	0	0	junction_4	1.16642368703961	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGGCCATATTGTCTT	9099	False	NA	NA	False	NA	NA	NA	83735744	83599672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_83600827_83601994_83602176_83604428_83604585_83604665_83604702_83606795_83606928_83607716_83607803_83610750_83610880_83612252_83612323_83613193_83613400_83622380_83622591_83624247_83624424_83631399_83631592_83632341_83632475_83636545_83636668_83637167_83637264_83638340_83638412_83641225_83641406_83646429_83646667_83647698_83647838_83648316_83648464_83652519_83652630_83735465
ES.31299.3	chr7	-	5466	21	NIC	ENSMUSG00000052353.14	novel	4287	24	NA	NA	-93	-2	intron_retention	FALSE	canonical	0	0	junction_3	1.19478031453485	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCTAGGCCATATTGT	10017	False	NA	NA	False	NA	NA	NA	83735803	83599675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_83602176_83604428_83604585_83604665_83604702_83606795_83606928_83607716_83607803_83610750_83610880_83612252_83612323_83613193_83613400_83622380_83622591_83624247_83624424_83631399_83631592_83632341_83632475_83636545_83636668_83637167_83637264_83638340_83638412_83641225_83641406_83646429_83646667_83647698_83647838_83648316_83648464_83652519_83652630_83735465
ES.313.1	chr1	-	1958	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37454816	37452858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_37452900_37454800
ES.3130.1	chr10	-	204	1	Intergenic	novelGene_2455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGTCTTTGTGTCAATT	NA	False	NA	NA	False	NA	NA	NA	75708725	75708521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75708500_75708700
ES.31300.1	chr7	-	2633	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-389	-6	-389	6	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTATGTGCTCCTTCCTT	NA	False	NA	-1	True	AATAAA	-24	NA	83801490	83758557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83760010_83763458_83763639_83800489
ES.31300.3	chr7	-	5888	2	NIC	ENSMUSG00000038459.11	novel	2238	3	NA	NA	-201	0	intron_retention	FALSE	canonical	3	1540	junction_1	0	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGGGCTTATGTGCTCC	NA	False	NA	-7	True	AATAAA	-18	NA	83801302	83758563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_83763639_83800489
ES.31300.5	chr7	-	2122	4	NNC	ENSMUSG00000038459.11	novel	2238	3	NA	NA	-192	-4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	681.293377823876	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGCGTGGGCTTATGTG	NA	False	NA	-11	True	AATAAA	-14	NA	83801293	83758567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_83759616_83759919_83760010_83763458_83763639_83800489
ES.31300.7	chr7	-	1743	3	NNC	ENSMUSG00000038459.11	novel	2238	3	NA	NA	1526	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	689.5	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGCGTGGGCTTATGTG	NA	False	NA	-11	True	AATAAA	-14	NA	83799352	83758567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_83760010_83763458_83763639_83799231
ES.31300.8	chr7	-	2194	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	-309	353	-309	-353	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGTTTCTGCTTTGAA	NA	False	NA	5	True	ATTAAA	-28	NA	83801410	83758916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83760010_83763458_83763639_83800489
ES.31300.9	chr7	-	6204	1	Intergenic	novelGene_25710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1045	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGGGAGATGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	83779322	83773118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_83773100_83779300
ES.31301.1	chr7	+	1060	2	Antisense	novelGene_ENSMUSG00000015709.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGTGTTTCCATCTAT	7393	False	NA	NA	False	TATAAA	-19	NA	83899658	83916321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_83899787_83915389
ES.31302.1	chr7	-	6212	19	FSM	ENSMUSG00000015709.10	ENSMUST00000085077.5	6151	19	-61	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_5	2.23123173644702	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTTGGACTGGCT	NA	False	NA	2	True	AATAAA	-20	NA	84059388	83895485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_83899363_83900573_83900711_83911600_83911752_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
ES.31302.2	chr7	-	5967	19	NNC	ENSMUSG00000015709.10	novel	6151	19	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.43749010760892	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAGTGCCTTGGACTG	NA	False	NA	-1	True	AATAAA	-17	NA	84059114	83895488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_83899363_83900541_83900711_83911600_83911752_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
ES.31303.1	chr7	-	1888	14	NNC	ENSMUSG00000030630.17	novel	1585	14	NA	NA	-275	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.596897326594	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCTGTTCTTGGTTTT	NA	False	NA	-7	True	AATAAA	-29	NA	84255425	84234369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246515_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ES.31303.2	chr7	-	1843	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	-265	7	-265	-7	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAATCTCTGTTCTTGG	NA	False	NA	-11	True	AATAAA	-25	NA	84255415	84234373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ES.31303.4	chr7	-	3300	14	NNC	ENSMUSG00000030630.17	novel	1585	14	NA	NA	70	-11	intron_retention	FALSE	canonical	0	0	junction_9	39.4620632743629	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACAGAAATCTCTGTTC	NA	False	NA	-15	True	AATAAA	-21	NA	84255042	84234377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84247483_84247686_84248261_84250035_84250240_84250363_84251288_84251400_84254850
ES.31303.5	chr7	-	2520	10	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	5266	14	1424	-14	3prime_fragment	FALSE	canonical	3	97	junction_9	8.08901098808946	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCCACAGAAATCTCTG	NA	False	NA	-18	True	AATAAA	-18	NA	84249884	84234380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261
ES.31303.6	chr7	-	4284	9	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	5280	14	1438	-14	intron_retention	FALSE	canonical	3	99	junction_8	7.54569413639329	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCCACAGAAATCTCTG	NA	False	NA	-18	True	AATAAA	-18	NA	84249870	84234380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385
ES.31303.7	chr7	-	1274	13	NNC	ENSMUSG00000030630.17	novel	1585	14	NA	NA	995	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.0468885498523	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCCACAGAAATCTCT	NA	False	NA	-19	True	AATAAA	-17	NA	84250313	84234381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244753_84246241_84246295_84246385_84246484_84248261_84248353_84249714_84249892_84249984_84250035_84250240
ES.31303.8	chr7	-	1363	11	ISM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	156	6883	-57	3487	5prime_fragment	FALSE	canonical	3	97	junction_6	5.88982172905089	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTCTCAGGGGTCCTC	NA	False	NA	NA	False	NA	NA	NA	84254994	84241249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ES.31303.9	chr7	-	3032	1	NIC	ENSMUSG00000030630.17	novel	1585	14	NA	NA	-68	-1145	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84255005	84251973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84252000_84255000
ES.31304.1	chr7	-	2049	7	NIC	ENSMUSG00000030629.16	novel	1538	7	NA	NA	-2	537	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	272.686429601638	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGTGTGTCTCAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	84328577	84263724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84328517
ES.31304.11	chr7	-	1689	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	-21	1287	-19	1	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTACGTTTCCC	NA	False	NA	NA	False	AATAAA	-14	NA	84339186	84264260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.13	chr7	-	1580	6	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	265.896671660252	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339123	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.14	chr7	-	1541	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	-3	0	1	0	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328603	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ES.31304.17	chr7	-	1637	8	NNC	ENSMUSG00000030629.16	novel	1658	8	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	285.551453599979	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339046	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302233_84339007
ES.31304.18	chr7	-	2158	11	NNC	ENSMUSG00000030629.16	novel	1658	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	326.519662501357	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339101	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84291493_84291646_84302089_84302251_84307901_84308013_84309547_84309679_84338953
ES.31304.19	chr7	-	1231	4	NNC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.436345548551	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339056	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267172_84283518_84283618_84338953
ES.31304.2	chr7	-	2093	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	108	754	34	534	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACCACTGTGTGTCTCA	NA	False	NA	NA	False	AATAAA	-12	NA	84339057	84263727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.21	chr7	-	1727	8	NIC	ENSMUSG00000030629.16	novel	792	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	293.651744314205	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339073	84264261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84291493_84291646_84338953
ES.31304.22	chr7	-	1667	8	NIC	ENSMUSG00000030629.16	novel	1658	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	285.079365963163	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGCTACGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	84328603	84264262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84328551
ES.31304.23	chr7	-	1575	7	NNC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	285.070166801088	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAAAAAAAGCTACGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	84339084	84264263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267166_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
ES.31304.24	chr7	-	1648	7	NNC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	4	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	287.505217343964	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	False	NA	NA	False	NA	NA	NA	84339087	84264280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267172_84269994_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
ES.31304.25	chr7	-	4549	7	NNC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	18	-19	intron_retention	TRUE	canonical	1	2	junction_2	312.342048971245	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	False	NA	NA	False	NA	NA	NA	84339073	84264280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84270121_84275205_84275295_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.26	chr7	-	3253	7	NNC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	4	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.298932389964	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	False	NA	NA	False	NA	NA	NA	84339087	84264280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_84265177_84267057_84267172_84268392_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.27	chr7	-	1380	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	88	1487	14	-199	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTGGTTTTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	84339077	84264460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.28	chr7	-	849	7	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	16	62	combination_of_known_junctions	FALSE	canonical	3	150	junction_5	197.190615620746	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGACTTGAGGTTTT	NA	False	NA	NA	False	AATACA	-25	NA	84339075	84264986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283199_84283446_84283618_84338953
ES.31304.29	chr7	-	4570	1	Intergenic	novelGene_25711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84277388	84272818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_84272800_84277400
ES.31304.3	chr7	-	4446	6	NIC	ENSMUSG00000030629.16	novel	1538	7	NA	NA	5	9	intron_retention	FALSE	canonical	3	57	junction_5	251.106829855343	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84328595	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ES.31304.4	chr7	-	4412	6	NIC	ENSMUSG00000030629.16	novel	624	7	NA	NA	5	9	intron_retention	FALSE	canonical	2	8	junction_5	270.061178254113	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84328595	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328551
ES.31304.5	chr7	-	1773	8	FSM	ENSMUSG00000030629.16	ENSMUST00000209165.2	967	8	-10	-796	-10	9	multi-exon	FALSE	canonical	3	64	junction_6	270.713795702534	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339101	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ES.31304.6	chr7	-	4560	6	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	20	9	intron_retention	FALSE	canonical	3	577	junction_4	72.676268478782	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339145	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31304.7	chr7	-	4641	7	NIC	ENSMUSG00000030629.16	novel	967	8	NA	NA	26	9	intron_retention	FALSE	canonical	3	64	junction_5	288.321242521062	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339065	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ES.31304.8	chr7	-	4587	7	NIC	ENSMUSG00000030629.16	novel	1658	8	NA	NA	0	9	intron_retention	FALSE	canonical	3	9	junction_6	301.657320297202	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84328575	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84265177_84267057_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84328517
ES.31304.9	chr7	-	6332	5	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	55	9	intron_retention	FALSE	canonical	3	577	junction_3	81.2173011125093	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84339036	84264252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ES.31305.1	chr7	-	158	1	Intergenic	novelGene_25712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	4850	False	NA	NA	False	NA	NA	NA	84674523	84674365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_84674400_84674500
ES.31306.1	chr7	-	4097	3	Intergenic	novelGene_25713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	85027718	85022981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_85025750_85026344_85026816_85026860
ES.31307.1	chr7	+	123	1	Intergenic	novelGene_25714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	86398156	86398279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_86398200_86398300
ES.31308.1	chr7	+	266	1	Intergenic	novelGene_25715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAAGACCTGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	86465540	86465806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_86465500_86465800
ES.31309.1	chr7	-	1460	3	Genic_Genomic	ENSMUSG00000092376.2	novel	939	1	NA	NA	-193538	343	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAATAATGCTGGACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	86750680	86555860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_86557169_86699777_86699849_86750599
ES.31309.2	chr7	-	3516	1	Antisense	novelGene_ENSMUSG00000090362.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAAAAGACCTAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	86688603	86685087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_86685100_86688600
ES.3131.1	chr10	+	382	2	Intergenic	novelGene_2456	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGTCTTGATCTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	75715150	75718702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75715267_75718436
ES.31310.1	chr7	+	3333	10	NIC	ENSMUSG00000030562.18	novel	592	6	NA	NA	76	16185	intron_retention	FALSE	canonical	0	0	junction_1	6.07565471755214	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGTTTCATTTTTCCA	NA	False	NA	NA	False	ATTAAA	-26	NA	86895379	86973605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_86895428_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86973006_86973140
ES.31310.11	chr7	+	4072	11	ISM	ENSMUSG00000030562.18	ENSMUST00000032781.14	3753	18	70606	-1088	70443	1088	3prime_fragment	FALSE	canonical	3	10	junction_3	2.68514431641951	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAATGTATACCACAT	NA	False	NA	NA	False	NA	NA	NA	86966462	87049006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31310.12	chr7	+	3593	1	Intergenic	novelGene_25716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGTAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	87029161	87032754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_87029200_87032800
ES.31310.2	chr7	+	2354	18	FSM	ENSMUSG00000030562.18	ENSMUST00000126887.8	3749	18	-28	1423	-28	-1053	multi-exon	FALSE	canonical	3	4	junction_2	3.42896273924463	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTCCATTTTCTAGGT	NA	False	NA	NA	False	ATTAAA	-14	NA	86895828	87046495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31310.3	chr7	+	3744	18	FSM	ENSMUSG00000030562.18	ENSMUST00000126887.8	3749	18	-15	20	-15	-20	multi-exon	FALSE	canonical	3	4	junction_2	3.42896273924463	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATATTAAAATTAAAA	NA	False	NA	NA	False	TATAAA	-25	NA	86895841	87047898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31310.4	chr7	+	3569	16	NIC	ENSMUSG00000030562.18	novel	3753	18	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.17079795189788	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGGAATTTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	86895844	87047918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_86896111_86896695_86896792_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31310.7	chr7	+	3572	19	NNC	ENSMUSG00000030562.18	novel	3749	18	NA	NA	2	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	4.52325950429664	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATATAGAAGACAGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	86895858	87047811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978_87046960_87047027
ES.31310.8	chr7	+	3661	17	NIC	ENSMUSG00000030562.18	novel	3749	18	NA	NA	15	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	4.58555817213128	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAAATGGTGTCTGT	NA	False	NA	NA	False	AATAAA	-5	NA	86895871	87047908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31310.9	chr7	+	3827	20	NNC	ENSMUSG00000030562.18	novel	3753	18	NA	NA	27	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.15587011251092	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAAGACAGCTTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	86895883	87047815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_86896111_86896695_86896792_86936380_86936491_86944991_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87002337_87002432_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ES.31311.1	chr7	+	145	1	Intergenic	novelGene_25717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87891545	87891690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_87891500_87891700
ES.31312.1	chr7	+	3565	4	FSM	ENSMUSG00000030560.18	ENSMUST00000131108.9	3220	4	-347	2	-298	-2	multi-exon	FALSE	canonical	0	0	junction_3	178.66417908716	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCACTGTGGCATTGTT	NA	False	NA	NA	False	AATAAA	-29	NA	87926994	87940603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87936101_87936187_87937857
ES.31312.10	chr7	+	2292	1	Genic_Genomic	ENSMUSG00000030560.18	novel	NA	NA	NA	NA	-7558	188	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAAACTTTCAGTAGTAC	NA	False	NA	NA	False	AATAAA	-10	NA	87938501	87940793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_87938500_87940800
ES.31312.11	chr7	+	1610	1	Genic_Genomic	ENSMUSG00000030560.18	novel	NA	NA	NA	NA	-6305	759	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACGCAGAAAGCCAATGC	NA	False	NA	NA	False	AATAAA	-16	NA	87939754	87941364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_87939800_87941400
ES.31312.12	chr7	+	1046	2	ISM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	29926	577	11159	-577	3prime_fragment	FALSE	canonical	3	363	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTCTTTCTATGTGT	NA	False	NA	12	True	AATAAA	-17	NA	87957218	87959519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_87957353_87958607
ES.31312.2	chr7	+	2004	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	-88	577	-88	-577	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTCTTTCTATGTGT	NA	False	NA	12	True	AATAAA	-17	NA	87927204	87959519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.3	chr7	+	4949	7	FSM	ENSMUSG00000109244.2_ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	2	-2458	2	2458	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTACTTTGCTACTTAA	NA	False	NA	NA	False	ATTAAA	-7	NA	87927294	87962554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.4	chr7	+	4397	7	FSM	ENSMUSG00000109244.2_ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	8	-1912	8	1912	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGTTGTCAGTATAC	NA	False	NA	NA	False	NA	NA	NA	87927300	87962008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.5	chr7	+	7436	7	FSM	ENSMUSG00000109244.2_ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	33	-4976	-16	0	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGACGTTCCATGTCTG	NA	False	NA	NA	False	NA	NA	NA	87927325	87965072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.6	chr7	+	2443	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	50	0	1	0	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGTTGTGTGTCTTT	NA	False	NA	NA	False	AATAAA	-34	NA	87927342	87960096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.7	chr7	+	3587	7	FSM	ENSMUSG00000109244.2_ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	51	-1145	-2	1145	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTCTGGGCACCACT	NA	False	NA	NA	False	AATATA	-11	NA	87927343	87961241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ES.31312.9	chr7	+	4644	1	NIC	ENSMUSG00000030560.18	novel	3220	4	NA	NA	8609	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCTCACTGTGGCA	NA	False	NA	NA	False	AATAAA	-24	NA	87935954	87940598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_87936000_87940600
ES.31313.1	chr7	+	1221	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	2	354	2	-354	multi-exon	FALSE	canonical	3	30	junction_1	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTAAGGGTTGTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	88079482	88140426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_88079812_88099688_88099970_88139815
ES.31313.2	chr7	+	1460	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	3	114	3	-114	multi-exon	FALSE	canonical	3	30	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGTTTCTGATATTAC	NA	False	NA	4	True	AATAAA	-17	NA	88079483	88140666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_88079812_88099688_88099970_88139815
ES.31313.3	chr7	+	4501	2	ISM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	20209	-3256	20088	3256	3prime_fragment	FALSE	canonical	3	39	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGGAGTCATGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	88099689	88144036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_88099970_88139815
ES.31313.4	chr7	+	4378	1	Genic_Genomic	ENSMUSG00000030559.9	novel	NA	NA	NA	NA	60994	4193	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTTTAAAATACATTT	NA	False	NA	NA	False	NA	NA	NA	88140595	88144973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_88140600_88145000
ES.31314.1	chr7	-	496	1	FSM	ENSMUSG00000069972.7	ENSMUST00000182017.2	453	1	27	-70	27	70	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGGGTGCGTGCCCCTC	NA	False	NA	NA	False	AATAAA	-42	NA	88180079	88179583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88179600_88180100
ES.31315.1	chr7	+	234	1	Intergenic	novelGene_25718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGAAGAGATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	88201991	88202225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88202000_88202200
ES.31316.1	chr7	-	3456	2	Intergenic	novelGene_25719	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTTGGCAGTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	88783693	88779587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_88781776_88782425
ES.31316.2	chr7	-	5579	3	Intergenic	novelGene_25720	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTGCTCTTTCATCAA	NA	False	NA	NA	False	AATAAA	-13	NA	88787112	88780361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_88781779_88782429_88784033_88784553
ES.31317.1	chr7	+	1953	1	Intergenic	novelGene_25721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAACAGTTCTACTGAAG	NA	False	NA	NA	False	NA	NA	NA	88835607	88837560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88835600_88837600
ES.31318.1	chr7	+	207	1	Intergenic	novelGene_25722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCAAACAGGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	88877920	88878127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88877900_88878100
ES.31319.1	chr7	+	1219	3	Antisense	novelGene_ENSMUSG00000039428.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCTCTGAAGAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	88896098	88910212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_88896382_88901454_88901571_88909392
ES.31319.2	chr7	+	3951	1	Intergenic	novelGene_25723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	88896117	88900068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88896100_88900100
ES.3132.1	chr10	+	1344	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	-24	1	-24	-1	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGACTCAATATGTTAG	NA	False	NA	NA	False	NA	NA	NA	75729222	75731774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
ES.3132.2	chr10	+	5398	4	FSM	ENSMUSG00000009092.6	ENSMUST00000218506.2	815	4	-13	-4570	3	4446	multi-exon	FALSE	canonical	0	0	junction_2	7.76029781788188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGCCAGTAAGAAGGAC	NA	False	NA	NA	False	NA	NA	NA	75729251	75736221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75729352_75729452_75729519_75730872_75730964_75731080
ES.3132.3	chr10	+	1303	6	NNC	ENSMUSG00000009092.6	novel	1321	7	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6.18384993349612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTCTGACTCAATATGT	NA	False	NA	NA	False	NA	NA	NA	75729279	75731771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75729352_75729452_75729604_75729792_75729895_75730265_75730462_75730872_75730964_75731080
ES.3132.4	chr10	+	3155	3	NIC	ENSMUSG00000009092.6	novel	815	4	NA	NA	23	888	intron_retention	FALSE	canonical	3	9	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACACAACCCAA	NA	False	NA	NA	False	AAAAAG	-30	NA	75729290	75732663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75729352_75729452_75730964_75731080
ES.31320.1	chr7	+	3668	1	Intergenic	novelGene_25724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCTGACTAGAGCTCCA	NA	False	NA	NA	False	AATGAA	-37	NA	88974290	88977958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88974300_88978000
ES.31321.1	chr7	+	168	1	Intergenic	novelGene_25725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGAAAGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	88992132	88992300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_88992100_88992300
ES.31322.1	chr7	-	3636	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	50.1052147423669	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTATTTCCATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	88987994	88788918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.10	chr7	-	3071	16	NNC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	30	-466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.988062474174	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTATGTCTGTTGT	NA	False	NA	-4	True	ATTAAA	-42	NA	89053400	88789387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88813647_88813705_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_89053280
ES.31322.11	chr7	-	3231	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	-8	477	-8	-477	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCCTCTCAGGTTTT	NA	False	NA	-15	True	ATTAAA	-31	NA	88988003	88789398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.12	chr7	-	6550	13	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	0	-482	intron_retention	FALSE	canonical	3	162	junction_8	13.7807736438207	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATTTTCTCCTCTCAG	NA	False	NA	-20	True	ATTAAA	-26	NA	88987968	88789403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793964_88797177_88797255_88800620_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.13	chr7	-	3129	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	-9	-488	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	47.9762021874529	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACCTCATTTTCTCC	NA	False	NA	-26	True	ATTAAA	-20	NA	88987954	88789409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.14	chr7	-	5737	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	-2	-489	intron_retention	FALSE	canonical	3	153	junction_2	15.1434950981265	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGACCTCATTTTCTC	NA	False	NA	-27	True	ATTAAA	-19	NA	88987970	88789410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.15	chr7	-	3186	3	ISM	ENSMUSG00000039428.12	ENSMUST00000156153.2	696	6	8290	-1649	-513	-493	3prime_fragment	FALSE	canonical	3	153	junction_2	24	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTACCTGGACCTCATTT	NA	False	NA	-31	True	ATTAAA	-15	NA	88795218	88789414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_88791179_88792988_88793057_88793864
ES.31322.16	chr7	-	7226	13	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	0	-808	intron_retention	FALSE	canonical	3	153	junction_1	14.2329332496464	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGCATCAGCACTTG	NA	False	NA	0	True	ATTAAA	-19	NA	88987968	88789729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88793057_88793864_88793964_88797177_88797255_88800620_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.17	chr7	-	2890	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	1	809	1	-809	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTTGCATCAGCACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	88987994	88789730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.18	chr7	-	5392	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	0	-809	intron_retention	FALSE	canonical	3	153	junction_2	15.1434950981265	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTTGCATCAGCACTT	NA	False	NA	-1	True	ATTAAA	-18	NA	88987945	88789730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.19	chr7	-	2798	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	8	-810	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	50.0059168096769	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTGCATCAGCACT	NA	False	NA	-2	True	ATTAAA	-17	NA	88987937	88789731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88953888_88953982_88956344_88956473_88987655
ES.31322.2	chr7	-	3709	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	-6	-3	-6	3	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTATTTCCATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	88988001	88788918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.20	chr7	-	2572	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	-1	-811	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	48.7087710653659	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCAGTTGCATCAGCAC	NA	False	NA	-3	True	ATTAAA	-16	NA	89053431	88789732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_89053280
ES.31322.21	chr7	-	2796	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	0	-811	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	50.1052147423669	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCAGTTGCATCAGCAC	NA	False	NA	-3	True	ATTAAA	-16	NA	88987968	88789732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.22	chr7	-	1890	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	-8	1818	-8	324	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTACTTTAAAAGATA	NA	False	NA	NA	False	AATATA	-18	NA	88988003	88790739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.23	chr7	-	1720	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	12	1968	12	174	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCGTTGCTTAATAATT	NA	False	NA	NA	False	AATACA	-13	NA	88987983	88790889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.24	chr7	-	3355	1	FSM	ENSMUSG00000039428.12	ENSMUST00000207335.2	1558	1	-1519	-278	-1519	278	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAATATGTTCAACATA	NA	False	NA	NA	False	NA	NA	NA	88796224	88792869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88792900_88796200
ES.31322.25	chr7	-	3590	1	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	1242	-3396	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAAGATTTCTCACCC	NA	False	NA	NA	False	NA	NA	NA	88802266	88798676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88798700_88802300
ES.31322.26	chr7	-	1241	5	NNC	ENSMUSG00000039428.12	novel	2986	13	NA	NA	0	61176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	79.6378521809824	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGCAGCCTAATGG	NA	False	NA	NA	False	AATAAA	-10	NA	88987968	88892518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_88893195_88929174_88929206_88953888_88953982_88956344_88956473_88987655
ES.31322.4	chr7	-	3425	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	-6	281	-6	-281	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTCGTGTTTTTATTT	NA	False	NA	27	True	AAAAAG	-32	NA	88988001	88789202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.5	chr7	-	5930	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	13	-308	intron_retention	FALSE	canonical	3	153	junction_2	15.1434950981265	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGAGAGATATTTT	NA	False	NA	0	True	AGTAAA	-23	NA	88987982	88789229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.6	chr7	-	3294	14	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	0	-313	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	50.1052147423669	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCATTTCTGTGAGAGAT	NA	False	NA	-5	True	AGTAAA	-18	NA	88987968	88789234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ES.31322.9	chr7	-	3660	1	NIC	ENSMUSG00000039428.12	novel	3700	15	NA	NA	1804	-320	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAGGTGCATTTCTGT	NA	False	NA	-12	True	AGTAAA	-11	NA	88792901	88789241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_88789200_88792900
ES.31323.1	chr7	+	2997	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	-9	3732	-9	-3732	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGTATACTCAATTGAC	NA	False	NA	NA	False	ATTAAA	-20	NA	89053553	89058610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89054180_89056239
ES.31323.2	chr7	+	6702	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	17	1	17	-1	multi-exon	FALSE	canonical	3	13	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTGCATTGGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	89053579	89062341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89054180_89056239
ES.31324.1	chr7	-	179	1	Intergenic	novelGene_25726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAAAGCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	89119571	89119392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_89119400_89119600
ES.31325.1	chr7	-	2897	4	Antisense	novelGene_ENSMUSG00000030621.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGGAAACTAATATTTC	NA	False	NA	NA	False	NA	NA	NA	89389138	89365050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_89367114_89378231_89378336_89383370_89383537_89388574
ES.31326.1	chr7	-	2579	15	FSM	ENSMUSG00000039391.12	ENSMUST00000041195.6	2439	15	101	-241	101	0	multi-exon	FALSE	canonical	0	0	junction_1	0.494871659305393	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGATGGTGATTTATG	NA	False	NA	NA	False	AATAAA	-17	NA	89552725	89515355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89515855_89518828_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89530821_89530969_89531499_89531591_89535353_89535478_89536889_89537012_89539599_89539680_89542319_89542577_89545904_89546062_89547245_89547308_89552389
ES.31327.1	chr7	+	1069	1	Intergenic	novelGene_25727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGACTGCTCTTCCG	NA	False	NA	NA	False	NA	NA	NA	89570753	89571822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_89570800_89571800
ES.31328.1	chr7	+	2669	2	Intergenic	novelGene_25728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATCTCTACCAATGTTA	NA	False	NA	NA	False	NA	NA	NA	89590510	89594748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_89590886_89592454
ES.31329.1	chr7	+	1541	1	Antisense	novelGene_ENSMUSG00000030619.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	89603681	89605222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_89603700_89605200
ES.3133.1	chr10	+	134	1	Antisense	novelGene_ENSMUSG00000000902.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	75750304	75750438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_75750300_75750400
ES.31330.1	chr7	+	154	1	Intergenic	novelGene_25729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	89614706	89614860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_89614700_89614900
ES.31331.1	chr7	-	3230	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	55	-1061	14	1061	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTAGTCTATGTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	89590357	89565675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ES.31331.10	chr7	-	837	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	-13	-18	-8	2	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTAACCTTTTCGTT	NA	False	NA	16	True	AATAAA	-35	NA	89590420	89567893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ES.31331.11	chr7	-	1062	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	2	1160	2	-1	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATGTGTAACCTTTTC	NA	False	NA	13	True	AATAAA	-32	NA	89590410	89567896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ES.31331.12	chr7	-	1155	6	NNC	ENSMUSG00000062797.15	novel	1053	6	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	531.473649393834	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATGTGTAACCTTTTC	NA	False	NA	13	True	AATAAA	-32	NA	89590410	89567896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89588829_89588923_89590176
ES.31331.13	chr7	-	1202	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	-135	-14	-2	-1	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATGTGTAACCTTTTC	NA	False	NA	13	True	AATAAA	-32	NA	89590409	89567896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ES.31331.14	chr7	-	625	3	NIC	ENSMUSG00000062797.15	novel	806	4	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	553.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACATGTGTAACCTTTT	NA	False	NA	12	True	AATAAA	-31	NA	89590364	89567897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89568216_89569280_89569400_89590176
ES.31331.15	chr7	-	987	5	NNC	ENSMUSG00000062797.15	novel	2224	5	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	485.677104669347	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCATTACATGTGTAA	NA	False	NA	6	True	AATAAA	-25	NA	89590410	89567903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590244
ES.31331.16	chr7	-	691	5	NIC	ENSMUSG00000062797.15	novel	1053	6	NA	NA	14	10	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	567.753192417269	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGGTCATGAAACCTAC	NA	False	NA	0	True	AATAAA	-34	NA	89590357	89568117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89590176
ES.31331.17	chr7	-	572	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	14	220	14	-4	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCATGAAGTCAAAAGG	NA	False	NA	-14	True	AATAAA	-20	NA	89590393	89568131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ES.31331.18	chr7	-	842	6	NNC	ENSMUSG00000062797.15	novel	1053	6	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	562.775621362546	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCATGAAGTCAAAAGG	NA	False	NA	-14	True	AATAAA	-20	NA	89590352	89568131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590244
ES.31331.19	chr7	-	2919	1	NIC	ENSMUSG00000062797.15	novel	1053	6	NA	NA	-6962	-4069	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTAGAAAAACTGAATAT	NA	False	NA	NA	False	NA	NA	NA	89579885	89576966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89577000_89579900
ES.31331.2	chr7	-	2982	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	56	-814	15	814	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACAAGATGGATTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	89590356	89565922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ES.31331.20	chr7	-	3865	8	Fusion	ENSMUSG00000030619.11_ENSMUSG00000109038.2	novel	528	6	NA	NA	11	26856	multi-exon	FALSE	non_canonical	0	0	junction_1	852.26318154209	1033	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89630173	89577005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_89577063_89614278_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.21	chr7	-	1820	3	Genic_Genomic	ENSMUSG00000109038.2	novel	408	1	NA	NA	-2068	37189	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1022	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89616670	89577005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_89577063_89614278_89615328_89615956
ES.31331.22	chr7	-	5208	7	Fusion	ENSMUSG00000030619.11_ENSMUSG00000109038.2	novel	528	6	NA	NA	13	26856	intron_retention	FALSE	non_canonical	0	0	junction_1	909.43456181422	1033	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89629750	89577005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_89577063_89614278_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.23	chr7	-	2547	1	FSM	ENSMUSG00000062797.15	ENSMUST00000207695.2	2539	1	-17	9	-15	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATACTTATTTTGCC	NA	False	NA	NA	False	AATAAA	-6	NA	89590388	89587841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89587800_89590400
ES.31331.24	chr7	-	2114	12	FSM	ENSMUSG00000030619.11	ENSMUST00000107234.3	2067	12	-41	-6	-41	6	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTATTTACTTTGAA	NA	False	NA	4	True	AATAAA	-39	NA	89630232	89603855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.25	chr7	-	4751	11	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	7	0	intron_retention	TRUE	non_canonical	0	0	junction_3	871.08738941624	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGAAAGCTATTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	89630177	89603861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604813_89605551_89605622_89611463_89612511_89612557_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.26	chr7	-	2192	12	NIC	ENSMUSG00000030619.11	novel	2067	12	NA	NA	-229	-9	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTTTACTTTAACTC	NA	False	NA	-17	True	AATAAA	-18	NA	89630420	89603876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.27	chr7	-	2684	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-9	intron_retention	FALSE	canonical	3	2155	junction_10	169.965172903157	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTTTACTTTAACTC	NA	False	NA	-17	True	AATAAA	-18	NA	89630173	89603876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.28	chr7	-	4262	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	840.679201991555	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAATGTTTACTTTAA	NA	False	NA	-20	True	AATAAA	-15	NA	89630173	89603879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89612511_89612557_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.29	chr7	-	1244	9	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-19	-13	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	805.134683997032	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAATGTTTACTTTA	NA	False	NA	-21	True	AATAAA	-14	NA	89629786	89603880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.3	chr7	-	2679	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	16	-471	11	471	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTAGATAGAGGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	89590396	89566265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ES.31331.30	chr7	-	5571	10	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	41	-13	intron_retention	FALSE	non_canonical	0	0	junction_4	877.292101924305	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAATGTTTACTTTA	NA	False	NA	-21	True	AATAAA	-14	NA	89629722	89603880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89612511_89612557_89614071_89616920_89617013_89618778_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.31	chr7	-	1712	13	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	20	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	975.69577382274	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAATGTTTACTTTA	NA	False	NA	-21	True	AATAAA	-14	NA	89629743	89603880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89627894_89628096_89629619
ES.31331.34	chr7	-	1639	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-8	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	696.160770355396	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	-24	True	AATAAA	-11	NA	89629775	89603883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604282_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.35	chr7	-	1691	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	88	-16	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	835.433732058478	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	-24	True	AATAAA	-11	NA	89629581	89603883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629274
ES.31331.36	chr7	-	4320	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	38	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	699.396599438248	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	-24	True	AATAAA	-11	NA	89630146	89603883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89612511_89612557_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.37	chr7	-	1780	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	88	-16	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	690.504355136743	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTTGTAATGTTTACT	NA	False	NA	-24	True	AATAAA	-11	NA	89629581	89603883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629274
ES.31331.39	chr7	-	1961	7	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	960	-17	combination_of_known_splicesites	FALSE	canonical	3	36	junction_3	895.440425464227	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTGTAATGTTTAC	NA	False	NA	-25	True	AATAAA	-10	NA	89620546	89603884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89613936_89614071_89616920_89617013_89618778_89618861_89619513
ES.31331.4	chr7	-	2761	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	-83	-1625	14	451	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTGCCTATTCAATG	NA	False	NA	NA	False	AATAAA	-1	NA	89590357	89566285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ES.31331.41	chr7	-	6307	2	ISM	ENSMUSG00000030619.11	ENSMUST00000207980.2	767	5	3337	71	1323	-71	intron_retention	FALSE	canonical	3	2380	junction_1	0	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89610712	89603938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_89604272_89604738
ES.31331.42	chr7	-	6706	9	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-35	-71	intron_retention	FALSE	non_canonical	0	0	junction_2	799.943503864492	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629704	89603938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89605622_89611463_89612511_89612557_89614071_89616920_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.43	chr7	-	3034	11	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	10	-71	intron_retention	FALSE	canonical	0	0	junction_7	727.392301306523	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89630174	89603938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620336_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.45	chr7	-	4491	1	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-2283	-71	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	804	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89608429	89603938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89603900_89608400
ES.31331.46	chr7	-	4624	11	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	55	-71	intron_retention	TRUE	non_canonical	0	0	junction_3	726.236469753482	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629855	89603938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89605622_89611463_89612506_89612552_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.47	chr7	-	1830	11	NIC	ENSMUSG00000030619.11	novel	2067	12	NA	NA	-2	-73	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	722.358671298407	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGTTATTTTTATTG	NA	False	NA	-11	True	AATAAA	-15	NA	89630186	89603940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89629619
ES.31331.48	chr7	-	3373	10	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-52	-74	intron_retention	FALSE	canonical	3	2155	junction_9	172.551513152908	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629819	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.5	chr7	-	2666	5	NIC	ENSMUSG00000062797.15	novel	1053	6	NA	NA	-2	451	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	493.07979830855	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTGCCTATTCAATG	NA	False	NA	NA	False	AATAAA	-1	NA	89590414	89566285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89568216_89569280_89569400_89579527_89579669_89584934_89585173_89590176
ES.31331.50	chr7	-	2166	13	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	881.061492840691	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630173	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617016_89617977_89618172_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.51	chr7	-	3846	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	34	-74	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	699.396599438248	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629729	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89612542_89612587_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.52	chr7	-	1727	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-74	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	871.4314029228	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630173	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89629619
ES.31331.53	chr7	-	1957	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	8	-74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	700.528301231611	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630176	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614056_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.54	chr7	-	1707	10	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	10	-74	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	871.972023562994	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630174	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.55	chr7	-	1812	10	NIC	ENSMUSG00000030619.11	novel	2067	12	NA	NA	1	-74	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	726.527271713327	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630190	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.56	chr7	-	1774	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	11	-74	combination_of_known_splicesites	FALSE	canonical	3	36	junction_3	864.166997749856	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89630173	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.58	chr7	-	2106	10	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	1	-74	intron_retention	FALSE	canonical	3	36	junction_2	749.837628514202	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629766	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89605622_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.59	chr7	-	1545	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-9	-74	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_9	689.354938623753	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629776	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620787_89621438_89621532_89626104_89626258_89629619
ES.31331.6	chr7	-	2459	4	FSM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	-23	-1601	14	442	multi-exon	FALSE	canonical	3	43	junction_2	457.818741425032	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTGTTCTGCC	NA	False	NA	NA	False	NA	NA	NA	89590357	89566294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89584934_89585173_89590176
ES.31331.61	chr7	-	7782	10	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	1	-74	intron_retention	FALSE	canonical	3	461	junction_1	617.408762690418	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629766	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604813_89605551_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.62	chr7	-	1380	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-40	-74	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	877.599618277036	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629807	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.64	chr7	-	1365	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	12	-74	combination_of_known_splicesites	FALSE	canonical	1	77	junction_9	850.152698049003	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGTTATTTTTATT	NA	False	NA	-12	True	AATAAA	-14	NA	89629751	89603941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89626104_89626258_89629619
ES.31331.66	chr7	-	1736	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	97	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	915.140905015757	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTTATTTTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	89629572	89603942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619664_89620747_89620814_89621438_89621532_89626104_89626258_89629274
ES.31331.68	chr7	-	2707	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-37	-75	intron_retention	FALSE	canonical	3	1777	junction_2	240.091003579893	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTTATTTTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	89629804	89603942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.69	chr7	-	4530	11	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	1	-75	intron_retention	TRUE	canonical	0	0	junction_3	726.236469753482	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTTATTTTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	89629766	89603942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89605622_89611463_89612511_89612558_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.7	chr7	-	2006	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	-12	-1188	-7	13	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGGCTATACAACAGCT	NA	False	NA	-1	True	AATAAA	-30	NA	89590419	89566723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ES.31331.70	chr7	-	1552	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	699.396599438248	829	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGTGTTATTTTTAT	NA	False	NA	-13	True	AATAAA	-13	NA	89629763	89603942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611564_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.71	chr7	-	1553	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	-1	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	697.062514241248	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGCTGTGTTATTTTT	NA	False	NA	-15	True	AATAAA	-11	NA	89629764	89603944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617015_89618784_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.72	chr7	-	1562	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	2	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	693.959629187569	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGCTGTGTTATTTTT	NA	False	NA	-15	True	AATAAA	-11	NA	89629761	89603944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89604272_89604738_89604821_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.73	chr7	-	1417	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	102	-16	-41	16	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGTCTGTTGTCTG	NA	False	NA	NA	False	GATAAA	-16	NA	89629808	89604128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.74	chr7	-	1632	10	NNC	ENSMUSG00000030619.11	novel	1111	7	NA	NA	11	2894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	757.248234655512	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTGTTGCATTGGGT	NA	False	NA	NA	False	NA	NA	NA	89630173	89610907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_89611134_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.75	chr7	-	1092	8	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	101	9636	-42	21	5prime_fragment	FALSE	canonical	3	2155	junction_7	201.039340245959	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTTCATCTAATTTA	NA	False	NA	NA	False	AATAAA	-37	NA	89629809	89613780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ES.31331.76	chr7	-	2492	1	FSM	ENSMUSG00000109038.2	ENSMUST00000208880.2	408	1	-2075	-9	-2075	9	mono-exon	FALSE	NA	NA	NA	NA	NA	787	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCCAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89616677	89614185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89614200_89616700
ES.31331.77	chr7	-	176	1	Intergenic	novelGene_25730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	779	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	89622555	89622379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_89622400_89622600
ES.31331.8	chr7	-	2218	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	18	-12	13	12	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGGCTATACAACAGC	NA	False	NA	-2	True	AATAAA	-29	NA	89590394	89566724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ES.31331.9	chr7	-	2353	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	-135	-1165	-2	-9	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTCAGTTATGTACCT	NA	False	NA	-23	True	AATAAA	-8	NA	89590409	89566745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ES.31332.1	chr7	-	171	1	Intergenic	novelGene_25731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAATAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	89636059	89635888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_89635900_89636100
ES.31333.1	chr7	-	177	1	Intergenic	novelGene_25732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	89659835	89659658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_89659700_89659800
ES.31334.1	chr7	+	158	1	Intergenic	novelGene_25733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATTAAATAAT	NA	False	NA	NA	False	NA	NA	NA	89665240	89665398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_89665200_89665400
ES.31335.1	chr7	+	4289	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	-648	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGGTGTTCTGGTTTGAG	NA	False	NA	21	True	AATAAA	-22	NA	89778772	89858142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.10	chr7	+	5537	18	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	4	0	intron_retention	FALSE	canonical	3	115	junction_2	24.3965225271694	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAATAATGTCTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	89779441	89858311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.11	chr7	+	3645	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	21	-177	4	6	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTCTGAATTCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	89779441	89858317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.12	chr7	+	4130	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	4	341	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAATTGTGTTTTAAAT	NA	False	NA	6	True	ATTAAA	-17	NA	89779441	89858652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.13	chr7	+	3490	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208730.2	3427	20	-59	-4	4	0	multi-exon	FALSE	canonical	1	1	junction_16	49.8793002992018	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779441	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ES.31335.14	chr7	+	3375	18	NIC	ENSMUSG00000039361.12	novel	3361	20	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	42.0758912304585	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779442	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89856790
ES.31335.15	chr7	+	3574	20	NIC	ENSMUSG00000039361.12	novel	3361	20	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	49.3808759959503	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779450	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89855367_89855470_89856790
ES.31335.16	chr7	+	3432	19	NNC	ENSMUSG00000039361.12	novel	3427	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	41.0935773420304	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779450	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840384_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.18	chr7	+	3867	18	NIC	ENSMUSG00000039361.12	novel	3489	19	NA	NA	16	345	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	39.0638728132472	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTTTTAAATTAAG	NA	False	NA	10	True	ATTAAA	-21	NA	89779453	89858656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89856790
ES.31335.19	chr7	+	3344	18	NIC	ENSMUSG00000039361.12	novel	3427	20	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	39.0638728132472	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779454	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89856790
ES.31335.2	chr7	+	3536	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	-47	0	-47	0	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779373	89858140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.20	chr7	+	3785	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	-245	-179	-5	6	multi-exon	FALSE	canonical	3	16	junction_12	48.3518384036048	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTCTGAATTCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	89779466	89858317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.21	chr7	+	3767	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTCTGAATTCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	89779469	89858317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.22	chr7	+	3567	20	NNC	ENSMUSG00000039361.12	novel	3361	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	47.1649430822902	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779469	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.23	chr7	+	3597	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	-240	4	0	0	multi-exon	FALSE	canonical	3	16	junction_12	48.3518384036048	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779471	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.24	chr7	+	3472	20	NNC	ENSMUSG00000039361.12	novel	3427	20	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.2171521650734	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779592	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89811260_89811422_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.25	chr7	+	3542	21	NNC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	56.4257033629179	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779598	89858140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89855367_89855470_89856790
ES.31335.26	chr7	+	3530	21	NNC	ENSMUSG00000039361.12	novel	8209	21	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.2226710269683	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779603	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89798243_89798437_89809655_89809799_89810467_89810544_89814721_89814825_89818391_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ES.31335.27	chr7	+	3418	21	FSM	ENSMUSG00000039361.12	ENSMUST00000049537.9	3528	21	-64	174	-43	0	multi-exon	FALSE	canonical	1	1	junction_17	57.7688497375532	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779659	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ES.31335.28	chr7	+	3347	21	NNC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	21	36239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	53.2404686305446	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAACTTCGGAAGTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	89779744	89898912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790_89858142_89898881
ES.31335.29	chr7	+	3742	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	133	-514	121	341	multi-exon	FALSE	canonical	3	16	junction_12	48.3518384036048	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAATTGTGTTTTAAAT	NA	False	NA	6	True	ATTAAA	-17	NA	89779844	89858652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.3	chr7	+	4029	19	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	-11	343	combination_of_known_junctions	FALSE	canonical	3	52	junction_13	32.2637663220516	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTGTTTTAAATTA	NA	False	NA	8	True	ATTAAA	-19	NA	89779409	89858654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.30	chr7	+	2921	18	NIC	ENSMUSG00000039361.12	novel	3427	20	NA	NA	151	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	42.4137635165772	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779874	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.31	chr7	+	2984	17	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	-4196	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	33.4934111990702	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAATAATGTCTGA	NA	False	NA	NA	False	AATAAA	-22	NA	89810524	89858310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.32	chr7	+	3441	17	FSM	ENSMUSG00000039361.12	ENSMUST00000207084.2	2929	17	-1	-511	-1	338	multi-exon	FALSE	canonical	3	16	junction_9	49.6915092722087	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGAAATTGTGTTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	89814719	89858649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.34	chr7	+	5845	7	ISM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	54686	-1	-3613	1	3prime_fragment	FALSE	canonical	3	52	junction_1	50.1023951523278	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTACGGTGTTCTGGTTT	NA	False	NA	18	True	AATAAA	-19	NA	89834397	89858139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.35	chr7	+	6026	6	NIC	ENSMUSG00000039361.12	novel	2743	14	NA	NA	102	0	intron_retention	FALSE	canonical	3	52	junction_1	52.0561235590973	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89838112	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89838466_89840348_89840481_89840566_89840598_89840861_89844923_89846123_89846229_89856790
ES.31335.36	chr7	+	5660	3	NIC	ENSMUSG00000039361.12	novel	2743	14	NA	NA	-1419	-1	intron_retention	FALSE	canonical	3	187	junction_1	6.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAATAATGTCTGA	NA	False	NA	NA	False	AATAAA	-22	NA	89840887	89858310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89844923_89846123_89846229_89856790
ES.31335.37	chr7	+	1470	1	NIC	ENSMUSG00000039361.12	novel	3489	19	NA	NA	12225	0	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89856664	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89856700_89858100
ES.31335.4	chr7	+	4003	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	0	-514	0	343	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTGTTTTAAATTA	NA	False	NA	8	True	ATTAAA	-19	NA	89779420	89858654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.6	chr7	+	3496	19	NIC	ENSMUSG00000039361.12	novel	3361	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_13	32.2637663220516	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779426	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.7	chr7	+	3578	20	NIC	ENSMUSG00000039361.12	novel	3427	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	47.2313220642141	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779431	89858138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89855367_89855470_89856790
ES.31335.8	chr7	+	3815	21	NNC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.6552386635072	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGTTACGGTGTTCT	NA	False	NA	13	True	AATAAA	-14	NA	89779431	89858134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89798243_89798437_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31335.9	chr7	+	3790	20	NNC	ENSMUSG00000039361.12	novel	3361	20	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	49.4998810821482	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTCTGAATTCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	89779440	89858317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ES.31336.1	chr7	-	474	2	FSM	ENSMUSG00000097162.3	ENSMUST00000209166.2	271	2	-191	-12	-147	3	multi-exon	FALSE	canonical	3	49	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTAAAATGTCTGACGC	NA	False	NA	-1	True	AATAAA	-29	NA	89779339	89774026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89774241_89779079
ES.31336.2	chr7	-	547	3	FSM	ENSMUSG00000097162.3	ENSMUST00000209164.2	432	3	-109	-6	-109	-3	multi-exon	FALSE	canonical	3	5	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCGCTATCTAAAATGTC	NA	False	NA	-7	True	AATAAA	-23	NA	89779301	89774032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_89774241_89776135_89776253_89779079
ES.31336.3	chr7	-	5178	1	Genic_Genomic	ENSMUSG00000097162.3	novel	NA	NA	NA	NA	-49	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAAGAATGAC	NA	False	NA	-38	True	NA	NA	NA	89779241	89774063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_89774100_89779200
ES.31337.1	chr7	-	2535	20	Antisense	novelGene_ENSMUSG00000109279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCGGCGCCAGGCTC	NA	False	NA	NA	False	NA	NA	NA	89857097	89779476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_89779909_89809653_89809797_89810465_89810542_89814719_89814824_89818388_89818484_89819786_89819898_89821440_89821547_89822239_89822285_89823657_89823740_89825484_89825609_89825864_89826002_89826705_89826810_89831442_89831576_89838356_89838465_89840347_89840481_89840566_89840598_89840861_89840961_89844861_89844923_89846123_89846232_89856794
ES.31337.2	chr7	-	5011	1	Antisense	novelGene_ENSMUSG00000109429.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGGAAAAAAGGAAG	NA	False	NA	NA	False	GATAAA	-22	NA	89787075	89782064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_89782100_89787100
ES.31337.3	chr7	-	2136	1	Antisense	novelGene_ENSMUSG00000039361.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACACAGGAGATATAGT	NA	False	NA	NA	False	NA	NA	NA	89819624	89817488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_89817500_89819600
ES.31338.1	chr7	+	2139	1	FSM	ENSMUSG00000044362.9	ENSMUST00000061391.9	2093	1	-48	2	-48	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTTCTTATTTCTC	4060	False	NA	NA	False	AGTAAA	-26	NA	90075736	90077875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90075700_90077900
ES.31339.1	chr7	+	4060	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	48	-732	48	732	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTTGGGTGTATTT	NA	False	NA	NA	False	AATACA	-20	NA	90091984	90096044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90096000
ES.31339.10	chr7	+	3775	3	FSM	ENSMUSG00000051451.7	ENSMUST00000209102.2	789	3	-1390	-1596	64	1323	multi-exon	FALSE	canonical	3	27	junction_2	37	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTATGCATTAAGTAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	90092000	90098525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632_90094702_90096404
ES.31339.11	chr7	+	3898	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-885	-1633	64	16	multi-exon	FALSE	canonical	3	101	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGCATTGATTGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	90092000	90096945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.12	chr7	+	9501	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	67	-6192	67	4302	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTTCTTGTACACGTG	NA	False	NA	NA	False	NA	NA	NA	90092003	90101504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90101500
ES.31339.13	chr7	+	1595	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	73	1708	73	-305	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAACGCTCATGCTCGGCT	NA	False	NA	NA	False	NA	NA	NA	90092009	90093604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90093600
ES.31339.14	chr7	+	1944	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1075	4	83	-4	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATTAGTGTCTTAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	90092019	90096925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
ES.31339.15	chr7	+	2033	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-857	-285	83	-1	multi-exon	FALSE	canonical	3	58	junction_1	21.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATGGGCTCAAAGAATT	NA	False	NA	NA	False	AATAAA	-21	NA	90092019	90095311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093296_90093507_90093586_90094632
ES.31339.16	chr7	+	3814	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	86	-524	86	524	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACTGTAAATGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	90092022	90095836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90095800
ES.31339.17	chr7	+	4279	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	86	-989	86	-628	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCACACCTCTGATAT	NA	False	NA	NA	False	NA	NA	NA	90092022	90096301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90096300
ES.31339.18	chr7	+	3509	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-862	-1267	87	-350	multi-exon	FALSE	canonical	3	101	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATGAAAAGATTCTCTG	NA	False	NA	NA	False	NA	NA	NA	90092023	90096579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.19	chr7	+	2890	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	87	399	87	-113	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTCTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	90092023	90094913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90094900
ES.31339.2	chr7	+	3698	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-888	-1919	52	16	multi-exon	FALSE	canonical	3	58	junction_1	21.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGCATTGATTGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	90091988	90096945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093296_90093507_90093586_90094632
ES.31339.20	chr7	+	1416	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	87	1873	87	-470	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATGAATGTGACACT	NA	False	NA	NA	False	ATTAAA	-19	NA	90092023	90093439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90093400
ES.31339.21	chr7	+	3756	3	ISM	ENSMUSG00000051451.7	ENSMUST00000208379.2	1269	4	-1062	278	88	-5	intron_retention	FALSE	canonical	0	0	junction_1	50.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGATTAGTGTCTTAAA	NA	False	NA	NA	False	AATAAA	-10	NA	90092024	90096924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_90093411_90093507_90093586_90094632
ES.31339.22	chr7	+	2143	3	ISM	ENSMUSG00000051451.7	ENSMUST00000208379.2	1269	4	-1062	1891	88	-1	5prime_fragment	FALSE	canonical	0	0	junction_1	50.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATGGGCTCAAAGAATT	NA	False	NA	NA	False	AATAAA	-21	NA	90092024	90095311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_90093411_90093507_90093586_90094632
ES.31339.23	chr7	+	3701	2	ISM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-842	-921	98	635	intron_retention	FALSE	canonical	3	58	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAAACTGTTGTCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	90092034	90095947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_90093296_90093507
ES.31339.24	chr7	+	1604	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1025	294	133	-294	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAATTTTGGAACAAAA	NA	False	NA	NA	False	AATAGA	-14	NA	90092069	90096635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
ES.31339.25	chr7	+	4636	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-816	-2440	133	550	multi-exon	FALSE	canonical	3	101	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCATGTATGGGCTCAA	NA	False	NA	NA	False	ATTAAA	-38	NA	90092069	90097752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.26	chr7	+	2336	3	ISM	ENSMUSG00000051451.7	ENSMUST00000208379.2	1269	4	-618	1254	-408	636	5prime_fragment	FALSE	canonical	0	0	junction_1	50.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAACTGTTGTCTTAC	NA	False	NA	NA	False	ATTAAA	-14	NA	90092468	90095948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_90093411_90093507_90093586_90094632
ES.31339.27	chr7	+	3798	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-140	-2278	-131	388	multi-exon	FALSE	canonical	3	101	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAATATTTGCATGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	90092745	90097590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.28	chr7	+	4120	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	2506	-3250	532	1360	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTTGTGTCAGAAAGC	NA	False	NA	NA	False	AGTAAA	-18	NA	90094442	90098562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90094400_90098600
ES.31339.3	chr7	+	2920	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-896	-644	53	644	multi-exon	FALSE	canonical	3	101	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	90091989	90095956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.4	chr7	+	2695	3	NNC	ENSMUSG00000051451.7	novel	891	3	NA	NA	54	640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTGTCTTACTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	90091990	90095952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_90093296_90093507_90093577_90094631
ES.31339.5	chr7	+	3322	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	54	0	54	0	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90091990	90095312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90095300
ES.31339.6	chr7	+	2273	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-893	0	56	0	multi-exon	FALSE	canonical	3	101	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90091992	90095312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.31339.7	chr7	+	4937	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	56	-1617	56	0	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	90091992	90096929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90092000_90096900
ES.31339.8	chr7	+	2693	3	FSM	ENSMUSG00000051451.7	ENSMUST00000107206.3	891	3	-876	-926	64	640	multi-exon	FALSE	canonical	3	58	junction_1	21.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTGTCTTACTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	90092000	90095952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093296_90093507_90093586_90094632
ES.31339.9	chr7	+	5473	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	-885	-3208	64	1318	multi-exon	FALSE	canonical	3	101	junction_1	0	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTGAATTATGCATTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	90092000	90098520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_90093586_90094632
ES.3134.1	chr10	+	4671	1	Antisense	novelGene_ENSMUSG00000000902.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGAAAGAAAGAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	75751393	75756064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_75751400_75756100
ES.31340.1	chr7	-	2413	3	NIC	ENSMUSG00000030615.13	novel	466	4	NA	NA	9	0	intron_retention	FALSE	canonical	3	739	junction_2	40	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1675	False	NA	NA	False	AATAAA	-7	NA	90106407	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90102109_90104631_90104728_90106279
ES.31340.2	chr7	-	771	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	16	12	-5	0	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1661	False	NA	NA	False	AATAAA	-7	NA	90106421	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ES.31340.3	chr7	-	761	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	-17	12	4	0	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1649	False	NA	NA	False	AATAAA	-7	NA	90106433	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
ES.31340.4	chr7	-	847	6	NNC	ENSMUSG00000030615.13	novel	799	5	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_5	375.952656593885	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1673	False	NA	NA	False	AATAAA	-7	NA	90106409	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90105779_90105868_90106279
ES.31340.5	chr7	-	546	4	FSM	ENSMUSG00000030615.13	ENSMUST00000207159.2	466	4	-80	0	3	0	multi-exon	FALSE	canonical	3	26	junction_2	346.691345275432	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1692	False	NA	NA	False	AATAAA	-7	NA	90106390	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90100144_90100750_90100866_90104631_90104728_90106279
ES.31340.6	chr7	-	1806	4	NIC	ENSMUSG00000030615.13	novel	466	4	NA	NA	9	0	intron_retention	FALSE	canonical	3	739	junction_3	32.6904675198546	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1675	False	NA	NA	False	AATAAA	-7	NA	90106407	90099919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90100144_90100750_90102109_90104631_90104728_90106279
ES.31340.7	chr7	-	3428	1	NIC	ENSMUSG00000030615.13	novel	756	5	NA	NA	2539	-424	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	4311	False	NA	NA	False	NA	NA	NA	90103771	90100343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90100300_90103800
ES.31340.8	chr7	-	2288	1	FSM	ENSMUSG00000030615.13	ENSMUST00000208639.2	1730	1	-12	-546	11	295	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCATGGAATATTTTG	1677	False	NA	NA	False	NA	NA	NA	90106405	90104117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90104100_90106400
ES.31341.1	chr7	-	870	6	NNC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	12	3571	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	127.099016518618	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAGTAGAGTTTGTT	6038	False	NA	NA	False	NA	NA	NA	90125191	90113074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_90113377_90117949_90118001_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.10	chr7	-	2132	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	4	123	-2	-123	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGATTTTTTTTCTATT	6024	False	NA	NA	False	NA	NA	NA	90125205	90116768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.11	chr7	-	3719	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	-170	intron_retention	FALSE	canonical	3	210	junction_1	27.6526068692749	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGGTTATACTGTGGG	6029	False	NA	NA	False	NA	NA	NA	90125200	90116815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118370_90118777_90118890_90119972_90121928_90125102
ES.31341.12	chr7	-	859	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	1391	3	1094	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAAGTTTCTTCTTTCTT	6029	False	NA	NA	False	TATAAA	-11	NA	90125200	90118036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.13	chr7	-	2486	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	13	1092	intron_retention	FALSE	canonical	3	210	junction_1	27.6526068692749	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACAAGTTTCTTCTTTC	6039	False	NA	NA	False	TATAAA	-9	NA	90125190	90118038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118370_90118777_90118890_90119972_90121928_90125102
ES.31341.2	chr7	-	5142	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	-2892	3	2892	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGGTCATGGTGTTTA	6029	False	NA	NA	False	NA	NA	NA	90125200	90113753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.3	chr7	-	4332	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	1674	intron_retention	FALSE	canonical	3	242	junction_2	12.657891697365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACTGTGTATTTATCTT	6029	False	NA	NA	False	AATGAA	-17	NA	90125200	90114971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.4	chr7	-	3886	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	46	-1673	40	1673	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTGTGTATTTATCT	6066	False	NA	NA	False	AATGAA	-16	NA	90125163	90114972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.5	chr7	-	3537	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	879	intron_retention	FALSE	canonical	3	242	junction_2	12.657891697365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAACCTCGAGTCTGACC	6029	False	NA	NA	False	NA	NA	NA	90125200	90115766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.6	chr7	-	2301	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	-51	3	51	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGGACTGTATAACC	6029	False	NA	NA	False	NA	NA	NA	90125200	90116594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ES.31341.7	chr7	-	3890	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	3	1	intron_retention	FALSE	canonical	3	210	junction_1	27.6526068692749	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGAGGTCCCTGT	6029	False	NA	NA	False	NA	NA	NA	90125200	90116644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118370_90118777_90118890_90119972_90121928_90125102
ES.31341.8	chr7	-	2120	4	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	112.652859114479	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGAGAATGCATG	6027	False	NA	NA	False	NA	NA	NA	90125202	90116655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118370_90118777_90118890_90119972_90120167_90125102
ES.31341.9	chr7	-	4975	3	NIC	ENSMUSG00000030614.9	novel	2259	5	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	210	junction_1	30.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGAGAATGCATG	6016	False	NA	NA	False	NA	NA	NA	90125213	90116655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_90118370_90118777_90121928_90125102
ES.31342.1	chr7	-	148	1	Intergenic	novelGene_25734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTTTTTAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	90205169	90205021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_90205000_90205200
ES.31343.1	chr7	-	3228	1	Intergenic	novelGene_25735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATCATCCATCCTGACC	NA	False	NA	NA	False	NA	NA	NA	90372116	90368888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_90368900_90372100
ES.31344.1	chr7	+	3658	7	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	154	junction_6	15.723301886761	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTGTAAATGTGTTA	NA	False	NA	9	True	AATAAA	-17	NA	92210354	92231501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.10	chr7	+	249	1	Intergenic	novelGene_25736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCCAAATAAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	92218965	92219214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_92219000_92219200
ES.31344.2	chr7	+	3533	8	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	40	-4	intron_retention	FALSE	canonical	3	154	junction_7	14.6760946815575	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCTCATTGTAAATGTG	NA	False	NA	6	True	AATAAA	-14	NA	92210396	92231498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.3	chr7	+	1560	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	45	-9	45	9	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGTTATAATTAATAT	NA	False	NA	19	True	AATAAA	-27	NA	92210401	92231511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.4	chr7	+	1332	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	56	208	56	-208	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAGTTGGATTTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	92210412	92231294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.5	chr7	+	3722	6	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	348	-100	intron_retention	FALSE	canonical	3	154	junction_5	15.4194682139171	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATACTATAACAA	NA	False	NA	-8	True	NA	NA	NA	92210704	92231402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92224591_92227631_92227747_92231002
ES.31344.6	chr7	+	1308	10	NNC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	363	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.178315828516	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTGTAAATGTGTTA	NA	False	NA	9	True	AATAAA	-17	NA	92210719	92231501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92222417_92222494_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.7	chr7	+	1238	9	NNC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	374	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.3982898784649	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTGTAAATGTGTTA	NA	False	NA	9	True	AATAAA	-17	NA	92210730	92231501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92230985
ES.31344.8	chr7	+	1194	8	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	382	-100	intron_retention	FALSE	canonical	3	146	junction_4	19.0990971044205	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATACTATAACAA	NA	False	NA	-8	True	NA	NA	NA	92210738	92231402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92224024_92224536_92224591_92227631_92227747_92231002
ES.31344.9	chr7	+	1802	7	NIC	ENSMUSG00000030613.14	novel	1596	9	NA	NA	384	-3	intron_retention	FALSE	canonical	3	146	junction_4	18.496996753227	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTCATTGTAAATGTGT	NA	False	NA	7	True	AATAAA	-15	NA	92210740	92231499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92224591_92227631_92227747_92231002
ES.31345.1	chr7	-	2719	12	NNC	ENSMUSG00000041343.20	novel	2782	12	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.88884714899955	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATCTGTATTTTACTG	NA	False	NA	NA	False	ATTAAA	-19	NA	92286315	92233412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92233750_92239324_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.10	chr7	-	2531	8	NIC	ENSMUSG00000041343.20	novel	2782	12	NA	NA	16	305	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.85293935756086	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAATCAGGACTCGAGC	NA	False	NA	NA	False	NA	NA	NA	92286294	92253839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.11	chr7	-	2065	9	ISM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	43	21064	3	-310	5prime_fragment	FALSE	canonical	2	4	junction_3	3.40725329260975	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATGTCTGAGTGAATCA	NA	False	NA	NA	False	NA	NA	NA	92286307	92254454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.3	chr7	-	4598	8	NNC	ENSMUSG00000041343.20	novel	735	2	NA	NA	107	8821	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.8554004376912	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGACTGATTTTTTTT	NA	False	NA	NA	False	CATAAA	-14	NA	92286136	92245323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253828_92254589_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.4	chr7	-	4984	10	NNC	ENSMUSG00000041343.20	novel	3542	8	NA	NA	16	8817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.74796902649367	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTGGACTGATTTT	NA	False	NA	NA	False	CATAAA	-10	NA	92286294	92245327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253828_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.5	chr7	-	2980	9	NNC	ENSMUSG00000041343.20	novel	3542	8	NA	NA	15	6948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.40254569624358	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGTGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92286295	92247196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253828_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.6	chr7	-	4652	9	NNC	ENSMUSG00000041343.20	novel	3542	8	NA	NA	3	6948	intron_retention	TRUE	non_canonical	0	0	junction_1	5.35607132140714	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGTGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92286307	92247196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253829_92254589_92259752_92259859_92261950_92263761_92268755_92268934_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.7	chr7	-	3121	10	NNC	ENSMUSG00000041343.20	novel	3542	8	NA	NA	10	6948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.74796902649367	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGTGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92286300	92247196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253828_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.8	chr7	-	4598	9	NNC	ENSMUSG00000041343.20	novel	3542	8	NA	NA	16	6948	intron_retention	FALSE	non_canonical	0	0	junction_1	4.52596674755792	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGTGTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	92286294	92247196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92247634_92253828_92254589_92259752_92259859_92261950_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31345.9	chr7	-	2704	9	ISM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	31	20437	-9	317	5prime_fragment	FALSE	canonical	2	4	junction_3	3.40725329260975	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGAGCCTCCGGGTAACT	NA	False	NA	NA	False	NA	NA	NA	92286319	92253827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ES.31346.1	chr7	+	3508	4	Fusion	ENSMUSG00000098066.3_ENSMUSG00000103887.2	novel	633	4	NA	NA	-1	-59	multi-exon	FALSE	canonical	3	7	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGACTGAGAGATCTTA	NA	False	NA	NA	False	NA	NA	NA	92286414	92296591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_92289546_92294751_92294848_92296000_92296162_92296471
ES.31346.2	chr7	+	1844	1	FSM	ENSMUSG00000102555.2	ENSMUST00000192772.2	3835	1	1757	234	1757	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATCACAAGTTTT	NA	False	NA	NA	False	AAAAAG	-17	NA	92290913	92292757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92290900_92292800
ES.31346.3	chr7	+	3575	1	Genic_Genomic	ENSMUSG00000098066.3	novel	NA	NA	NA	NA	6708	2579	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAATAAGCCTCATG	NA	False	NA	NA	False	AATAAA	-11	NA	92295654	92299229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_92295700_92299200
ES.31347.1	chr7	+	177	1	Intergenic	novelGene_25737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGTTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	92303511	92303688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_92303500_92303700
ES.31348.1	chr7	+	5256	1	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAACTATCAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	92310033	92315289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92310000_92315300
ES.31348.2	chr7	+	1953	4	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-44	NA	92310035	92315267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92311288_92312672_92312865_92313174_92313362_92314945
ES.31348.3	chr7	+	3559	3	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAACTATCAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	92310035	92315289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92311288_92312672_92312865_92313174
ES.31348.4	chr7	+	4944	2	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAACTATCAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	92310035	92315289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92312865_92313174
ES.31348.5	chr7	+	6087	1	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCCCCTCTTTAAAT	NA	False	NA	NA	False	GATAAA	-31	NA	92311098	92317185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92311100_92317200
ES.31348.6	chr7	+	2806	2	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAACTATCAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	92311098	92315289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_92311288_92312672
ES.31349.1	chr7	-	1960	1	Antisense	novelGene_ENSMUSG00000102555.2_AS_novelGene_ENSMUSG00000098066.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	92289468	92287508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_92287500_92289500
ES.3135.1	chr10	+	1333	1	Antisense	novelGene_ENSMUSG00000000902.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAAATACGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	75757044	75758377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_75757000_75758400
ES.31350.1	chr7	-	6082	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	-1	-86	-1	86	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGTGAAACCTGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	92319143	92292664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.12	chr7	-	7382	14	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	3589	171	-2808	-171	intron_retention	FALSE	canonical	3	110	junction_9	48.8703150420344	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGGTTTGTATTTCTT	NA	False	NA	-4	True	AATAAA	-14	NA	92315553	92292921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174
ES.31350.16	chr7	-	5293	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	-9	711	-9	6	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGTGTAATATTTATGC	NA	False	NA	0	True	NA	NA	NA	92319151	92293461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.17	chr7	-	7289	15	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	1558	711	1527	6	3prime_fragment	FALSE	canonical	3	109	junction_14	50.802739762211	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGTGTAATATTTATGC	NA	False	NA	0	True	NA	NA	NA	92317584	92293461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947
ES.31350.18	chr7	-	5677	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-1	5	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAGTGTAATATTTATG	NA	False	NA	-1	True	NA	NA	NA	92319143	92293462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.19	chr7	-	3498	7	NIC	ENSMUSG00000041328.17	novel	4731	13	NA	NA	-6816	5	intron_retention	FALSE	canonical	3	164	junction_6	36.1140169770994	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAGTGTAATATTTATG	NA	False	NA	-1	True	NA	NA	NA	92304233	92293462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357
ES.31350.2	chr7	-	6442	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	0	85	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTGTGAAACCTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	92319111	92292665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.20	chr7	-	1866	1	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	2086	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATGGAGTGTAATATTT	NA	False	NA	-4	True	NA	NA	NA	92295331	92293465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293500_92295300
ES.31350.21	chr7	-	5278	16	NNC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-10	1	intron_retention	FALSE	canonical	0	0	junction_15	66.1360886522799	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATGGAGTGTAATATT	NA	False	NA	-5	True	NA	NA	NA	92319121	92293466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315094_92318636
ES.31350.23	chr7	-	5475	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	27	-138	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCCTGCACAGTTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	92319084	92293605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.24	chr7	-	5104	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	31	860	0	-143	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTACTGCCTGCACAG	NA	False	NA	NA	False	AATAAA	-18	NA	92319111	92293610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.25	chr7	-	5366	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	2	-272	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGCTGCTGTTGGA	NA	False	NA	NA	False	AATAAA	-26	NA	92319109	92293739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.26	chr7	-	1722	1	FSM	ENSMUSG00000041328.17	ENSMUST00000208255.2	1720	1	-22	20	9	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATATAAAATATG	NA	False	NA	NA	False	AATAAA	-39	NA	92319133	92317411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92317400_92319100
ES.31350.3	chr7	-	6458	16	NNC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-2	82	intron_retention	FALSE	canonical	0	0	junction_1	71.5114909181268	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTACAGTGTGAAACCTG	NA	False	NA	NA	False	AATAAA	-15	NA	92319113	92292668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92294003_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.4	chr7	-	11583	14	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	2	81	intron_retention	FALSE	canonical	3	46	junction_9	58.2916560046403	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACAGTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-14	NA	92319109	92292669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174
ES.31350.6	chr7	-	6988	15	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	2766	-166	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	58.9210817751255	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTATTTCTTGAGTG	NA	False	NA	1	True	AATAAA	-19	NA	92316345	92292916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947
ES.31350.7	chr7	-	5853	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	-26	168	-26	-168	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTATTTCTTGAG	NA	False	NA	-1	True	AATAAA	-17	NA	92319168	92292918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31350.8	chr7	-	9340	15	ISM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	49	169	18	-169	intron_retention	FALSE	canonical	3	109	junction_14	50.802739762211	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	-2	True	AATAAA	-16	NA	92319093	92292919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947
ES.31350.9	chr7	-	6220	16	NIC	ENSMUSG00000041328.17	novel	5995	16	NA	NA	-1	-169	intron_retention	FALSE	canonical	3	46	junction_9	61.6724681955679	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTGTATTTCTTGA	NA	False	NA	-2	True	AATAAA	-16	NA	92319143	92292919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ES.31351.1	chr7	-	4640	1	Intergenic	novelGene_25738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCTGTCATTTTGTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	92355670	92351030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_92351000_92355700
ES.31351.2	chr7	-	3975	3	Antisense	novelGene_ENSMUSG00000109395.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGGTGTATGTATGGT	NA	False	NA	NA	False	NA	NA	NA	92364419	92352597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_92356438_92361124_92361202_92364361
ES.31351.3	chr7	-	3063	3	Antisense	novelGene_ENSMUSG00000109395.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTACATGAATGT	NA	False	NA	NA	False	NA	NA	NA	92364409	92353499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_92356438_92361124_92361202_92364361
ES.31352.1	chr7	-	4378	2	NNC	ENSMUSG00000074024.6	novel	6559	2	NA	NA	3824	5235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCATATTTGGATGT	NA	False	NA	NA	False	NA	NA	NA	92386843	92378138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92379072_92383398
ES.31352.2	chr7	-	6004	1	Genic_Genomic	ENSMUSG00000074024.6	novel	NA	NA	NA	NA	5616	4326	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	92385051	92379047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_92379000_92385100
ES.31352.3	chr7	-	3942	2	NNC	ENSMUSG00000074024.6	novel	6559	2	NA	NA	6937	4326	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	92383730	92379047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92381054_92381794
ES.31352.4	chr7	-	5244	2	NNC	ENSMUSG00000074024.6	novel	6559	2	NA	NA	2	4326	intron_retention	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	92390665	92379047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92379730_92386103
ES.31352.5	chr7	-	5220	2	NNC	ENSMUSG00000074024.6	novel	6559	2	NA	NA	-3	4324	intron_retention	TRUE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	92390670	92379049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92379730_92386130
ES.31352.6	chr7	-	7314	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	11	-3493	2	22	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGATACATGAATTGA	NA	False	NA	NA	False	NA	NA	NA	92390665	92383351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92383400_92390700
ES.31352.7	chr7	-	5090	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	38	-1296	29	1296	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTCTTTCAGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	92390638	92385548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92385500_92390600
ES.31352.8	chr7	-	3826	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	6	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATAAGCAGGGTATTTA	NA	False	NA	NA	False	AAAAAG	-15	NA	92390670	92386844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92386800_92390700
ES.31352.9	chr7	-	1998	1	FSM	ENSMUSG00000074024.6	ENSMUST00000098305.4	3811	1	41	1772	32	1276	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGGCGTTCTTTCACG	NA	False	NA	NA	False	AATAAA	-19	NA	92390635	92388637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92388600_92390600
ES.31353.1	chr7	+	1514	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	57	7885	-7	3	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCAGTCTTCTTCAGT	NA	False	NA	NA	False	AATAAA	-23	NA	92390867	92485858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ES.31353.2	chr7	+	1688	6	NNC	ENSMUSG00000030643.15	novel	9456	5	NA	NA	30	-117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.49947366963033	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGCTCCATGACTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	92390904	92485735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92391051_92451535_92451870_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ES.31353.3	chr7	+	1344	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	103	8009	39	-118	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAGCTCCATGACTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	92390913	92485734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ES.31353.4	chr7	+	3222	5	FSM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	103	6131	39	1757	multi-exon	FALSE	canonical	3	12	junction_3	4.32290411644765	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGCCAAGAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	92390913	92487612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ES.31353.5	chr7	+	249	1	Intergenic	novelGene_25739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCTATGCCAATATCT	7749	False	NA	NA	False	AATAAA	-34	NA	92401160	92401409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_92401200_92401400
ES.31354.1	chr7	-	2147	1	Antisense	novelGene_ENSMUSG00000030643.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92485092	92482945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_92482900_92485100
ES.31355.1	chr7	+	3913	1	ISM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	99019	1	20702	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGGAGGATTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	92489829	92493742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_92489800_92493700
ES.31356.1	chr7	-	3482	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	-18	-2624	-8	0	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523463	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
ES.31356.10	chr7	-	4191	1	NIC	ENSMUSG00000030641.11	novel	3387	6	NA	NA	12457	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTTTTTTGTTATA	NA	False	NA	-5	True	AGTAAA	-14	NA	92510927	92506736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92506700_92510900
ES.31356.11	chr7	-	2955	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	4	-2119	-1	-505	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCACACATAAAACCAACAT	NA	False	NA	NA	False	GATAAA	-2	NA	92523441	92507237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
ES.31356.12	chr7	-	1789	4	NIC	ENSMUSG00000030641.11	novel	417	5	NA	NA	1	-857	intron_retention	FALSE	canonical	3	123	junction_2	42.4604391038163	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGCACATTTTTACTC	NA	False	NA	NA	False	ATTAAA	-21	NA	92523444	92510213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92511695_92515778_92515908_92521969_92522053_92523348
ES.31356.2	chr7	-	3403	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523471	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ES.31356.3	chr7	-	3412	7	NIC	ENSMUSG00000030641.11	novel	840	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	82.9131071262761	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523401	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517399_92521969_92522053_92523348
ES.31356.4	chr7	-	4463	5	NIC	ENSMUSG00000030641.11	novel	3387	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	123	junction_3	39.5561310039291	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523444	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ES.31356.5	chr7	-	4515	6	NIC	ENSMUSG00000030641.11	novel	840	7	NA	NA	-25	0	intron_retention	FALSE	canonical	3	86	junction_3	62.1173083769733	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523409	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
ES.31356.6	chr7	-	4998	3	ISM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	9831	0	9760	0	3prime_fragment	FALSE	canonical	3	201	junction_1	7.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92513624	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_92509521_92510607_92510726_92511532
ES.31356.7	chr7	-	3255	5	NIC	ENSMUSG00000030641.11	novel	3387	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86.7035178063728	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523441	92506732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_92509521_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ES.31356.8	chr7	-	2600	6	NNC	ENSMUSG00000030641.11	novel	3387	6	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1037454576192	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTTTTTTGTTATA	NA	False	NA	-5	True	AGTAAA	-14	NA	92523410	92506736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92508783_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ES.31356.9	chr7	-	3508	8	NNC	ENSMUSG00000030641.11	novel	840	7	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.8902963841421	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTTTTTTGTTATA	NA	False	NA	-5	True	AGTAAA	-14	NA	92523444	92506736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92517481_92517531_92521969_92522053_92523348
ES.31357.1	chr7	+	2167	1	FSM	ENSMUSG00000061119.8	ENSMUST00000208686.2	2093	1	-139	65	-139	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92523538	92525705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92523500_92525700
ES.31357.10	chr7	+	2784	1	Intergenic	novelGene_25740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCTTTAAATCTACAGA	7259	False	NA	NA	False	NA	NA	NA	92568806	92571590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_92568800_92571600
ES.31357.11	chr7	+	1584	3	ISM	ENSMUSG00000061119.8	ENSMUST00000207594.2	2245	9	52186	6	52186	-6	3prime_fragment	FALSE	canonical	3	111	junction_1	9.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATTTATTGAAAAAGT	NA	False	NA	96	True	AATAAA	-18	NA	92576693	92583216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_92577053_92577812_92578001_92582179
ES.31357.2	chr7	+	2294	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	75	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	36.7219280539571	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAGAATGTACTTCT	NA	False	NA	109	True	AATAAA	-31	NA	92523752	92583229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92523891_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.3	chr7	+	4134	9	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	76	1301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0403074366291	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAATCTTATTAAGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	92523753	92585092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92523869_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.4	chr7	+	3158	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	-704	513	78	56	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTGTTACCAGTATCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92523755	92583278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.5	chr7	+	1585	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	-12	1394	-12	-825	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAATTTTTTTTTGTT	NA	False	NA	NA	False	AAGAAA	-44	NA	92524447	92582397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.6	chr7	+	4267	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	5	-1305	5	1305	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTATTAAGTCTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	92524464	92585096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.7	chr7	+	2929	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	28	10	-15	-10	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAATGCATTTATA	NA	False	NA	NA	False	NA	NA	NA	92524487	92583781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ES.31357.8	chr7	+	5187	6	ISM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	47	11180	-1	-10611	5prime_fragment	FALSE	canonical	3	95	junction_2	2.87054001888146	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	92524506	92572611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209
ES.31357.9	chr7	+	2339	10	NNC	ENSMUSG00000061119.8	novel	2967	9	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	43.4710063727737	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATTTATTGAAAAAGT	NA	False	NA	96	True	AATAAA	-18	NA	92524510	92583216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92577980_92578328_92578348_92582179
ES.31358.1	chr7	-	1599	1	Intergenic	novelGene_25741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	TATAAA	-16	NA	92576438	92574839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_92574800_92576400
ES.31359.1	chr7	+	201	1	Intergenic	novelGene_25742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATACTCATAGTAATTGA	NA	False	NA	NA	False	NA	NA	NA	92591316	92591517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_92591300_92591500
ES.3136.1	chr10	+	2405	5	FSM	ENSMUSG00000049422.8	ENSMUST00000219839.2	1488	5	-914	-3	-914	3	multi-exon	FALSE	canonical	3	13	junction_1	7283.8894829617	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTGCCCATTTACTG	3589	False	NA	26	True	ATTAAA	-23	NA	75768049	75773584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75769333_75771248_75771839_75772071_75772280_75773140_75773289_75773408
ES.3136.10	chr10	+	626	4	NNC	ENSMUSG00000049422.8	novel	939	4	NA	NA	326	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8132.25016011354	1602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTGTGCCCATTT	7272	False	NA	22	True	ATTAAA	-19	NA	75771732	75773580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75771839_75772079_75772280_75773140_75773289_75773408
ES.3136.11	chr10	+	864	3	NIC	ENSMUSG00000049422.8	novel	939	4	NA	NA	327	0	intron_retention	FALSE	canonical	3	16591	junction_2	626	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	7273	False	NA	20	True	ATTAAA	-17	NA	75771733	75773578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75772280_75773140_75773289_75773408
ES.3136.13	chr10	+	544	4	NNC	ENSMUSG00000049422.8	novel	405	2	NA	NA	556	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	8130.36827100853	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	7502	False	NA	20	True	ATTAAA	-17	NA	75771962	75773578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75771981_75772071_75772280_75773140_75773289_75773408
ES.3136.14	chr10	+	3047	3	NNC	ENSMUSG00000049422.8	novel	939	4	NA	NA	132	3324	intron_retention	FALSE	canonical	0	0	junction_2	8295.5	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCCTCAGTCATAG	8725	False	NA	NA	False	NA	NA	NA	75773185	75776905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75773289_75773408_75773505_75774057
ES.3136.2	chr10	+	1366	3	ISM	ENSMUSG00000049422.8	ENSMUST00000219839.2	1488	5	29	1074	29	-1052	5prime_fragment	FALSE	canonical	3	13	junction_1	7904	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTTTTTTAAAGATAT	4532	False	NA	NA	False	NA	NA	NA	75768992	75772507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75769333_75771248_75771839_75772071
ES.3136.3	chr10	+	518	3	NIC	ENSMUSG00000049422.8	novel	939	4	NA	NA	294	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7910.5	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTGTGCCCATTT	7240	False	NA	22	True	ATTAAA	-19	NA	75771700	75773580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75771839_75772071_75772280_75773408
ES.3136.4	chr10	+	625	4	NNC	ENSMUSG00000049422.8	novel	939	4	NA	NA	302	-1	at_least_one_novel_splicesite	FALSE	canonical	3	841	junction_2	7249.94865882204	1602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTGTGCCCATTT	7248	False	NA	22	True	ATTAAA	-19	NA	75771708	75773580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75771839_75772071_75772280_75773173_75773289_75773408
ES.3136.5	chr10	+	1870	1	NIC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	302	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1602	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	7248	False	NA	20	True	ATTAAA	-17	NA	75771708	75773578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75771700_75773600
ES.3136.8	chr10	+	627	4	NNC	ENSMUSG00000049422.8	novel	939	4	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7646.04634217362	1602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	7271	False	NA	20	True	ATTAAA	-17	NA	75771731	75773578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75771839_75772071_75772280_75773146_75773289_75773408
ES.31360.1	chr7	+	1796	1	FSM	ENSMUSG00000051515.12	ENSMUST00000051179.12	2002	1	54	152	54	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATGGAACAGAGGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	92729126	92730922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_92729100_92730900
ES.31361.1	chr7	-	691	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	-24	-42	-24	4	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	92828876	92828185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_92828200_92828900
ES.31361.2	chr7	-	623	2	NNC	ENSMUSG00000087412.5	novel	849	2	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	NA	False	NA	-22	True	AATAAA	-15	NA	92828872	92828189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_92828688_92828747
ES.31362.1	chr7	-	175	1	Intergenic	novelGene_25743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTATGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93314497	93314322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_93314300_93314500
ES.31363.1	chr7	+	5281	2	Intergenic	novelGene_25744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTTCAATTTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	94294433	94300670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_94294552_94295507
ES.31364.1	chr7	-	2661	1	Intergenic	novelGene_25745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAATTATTGCTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	95827089	95824428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_95824400_95827100
ES.31365.1	chr7	-	936	4	Antisense	novelGene_ENSMUSG00000048078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATGATTACCTCATG	NA	False	NA	NA	False	ATTAAA	-22	NA	95847657	95831498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_95832116_95835874_95835964_95838095_95838196_95847527
ES.31365.2	chr7	-	862	3	Antisense	novelGene_ENSMUSG00000048078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_2	3	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATGATTACCTCATG	NA	False	NA	NA	False	ATTAAA	-22	NA	95847683	95831498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_95832116_95835874_95835964_95847527
ES.31365.3	chr7	-	1378	2	Antisense	novelGene_ENSMUSG00000048078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAGGAAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	95847722	95846132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_95847104_95847315
ES.31366.1	chr7	-	1198	1	FSM	ENSMUSG00000108528.2	ENSMUST00000205708.2	641	1	-487	-70	-487	70	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGAAAAAAATTGAAAT	NA	False	NA	NA	False	TATAAA	-34	NA	95853230	95852032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_95852000_95853200
ES.31367.1	chr7	+	9392	32	NNC	ENSMUSG00000048078.17	novel	704	5	NA	NA	-161	-1617	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	6.57732363992437	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCCTTTTTCTCCTTGAG	NA	False	NA	NA	False	NA	NA	NA	95859191	96556144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_95859617_96004562_96004619_96085966_96086066_96145450_96145548_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96384888_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.10	chr7	+	6042	1	FSM	ENSMUSG00000076143.3	ENSMUST00000102189.3	109	1	96	-6029	96	6029	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGCCTTGGGGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	95898726	95904768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_95898700_95904800
ES.31367.11	chr7	+	555	1	FSM	ENSMUSG00000076143.3	ENSMUST00000102189.3	109	1	96	-542	96	542	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCTTCAGATAAGTG	NA	False	NA	NA	False	CATAAA	-9	NA	95898726	95899281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_95898700_95899300
ES.31367.12	chr7	+	8370	28	NNC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	-85582	-11604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	6.58426440256678	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTTTGGTTTACTTAC	NA	False	NA	NA	False	NA	NA	NA	96086022	96546157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96086066_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384888_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859
ES.31367.13	chr7	+	10028	31	NNC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	-28066	-695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.14578352752322	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGGTTTTGTTTTTGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	96143538	96557066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96143656_96145450_96145548_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384888_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.14	chr7	+	6799	3	NNC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	27676	8973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAGCGTTGTTGAAATAA	NA	False	NA	NA	False	AATAAA	-11	NA	96199280	96211662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96199507_96202684_96202955_96205359
ES.31367.15	chr7	+	4951	22	NIC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	27830	31148	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5.29578619979346	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGTGTTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	96199434	96523795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96199507_96202684_96202955_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860
ES.31367.17	chr7	+	3700	15	ISM	ENSMUSG00000048078.17	ENSMUST00000107162.8	11021	33	566029	33983	-40659	31146	internal_fragment	FALSE	canonical	2	10	junction_2	4.21670632661298	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACATGTGTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	96386481	96523793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860
ES.31367.18	chr7	+	234	1	Intergenic	novelGene_25753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCACAAATACATTTG	NA	False	NA	NA	False	NA	NA	NA	96402211	96402445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96402200_96402400
ES.31367.19	chr7	+	124	1	Intergenic	novelGene_25754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCCCACAGTGTATTT	NA	False	NA	NA	False	NA	NA	NA	96402220	96402344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96402200_96402300
ES.31367.2	chr7	+	10490	33	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	-160	-692	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	6.02590436677351	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTGTTTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	95859192	96557069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96145450_96145548_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.20	chr7	+	8275	18	ISM	ENSMUSG00000048078.17	ENSMUST00000107162.8	11021	33	606570	-10	-118	10	3prime_fragment	FALSE	canonical	2	12	junction_8	5.21443299110125	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTCACGCTGTTGCAACC	NA	False	NA	NA	False	NA	NA	NA	96427022	96557786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.21	chr7	+	6512	17	NNC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	591	-1626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.50840802347241	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTTTTGTTCCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	96446438	96556135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542367_96543859_96545475_96552051_96552195_96555039
ES.31367.22	chr7	+	1929	1	Antisense	novelGene_ENSMUSG00000085443.2_AS_novelGene_ENSMUSG00000108635.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAACAACCAGAAAA	4982	False	NA	NA	False	NA	NA	NA	96461300	96463229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_96461300_96463200
ES.31367.23	chr7	+	5452	13	ISM	ENSMUSG00000048078.17	ENSMUST00000107162.8	11021	33	671871	1748	46476	-1733	3prime_fragment	FALSE	canonical	3	12	junction_3	5.16128752240067	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTCACACTTTTTT	NA	False	NA	NA	False	AAGAAA	-13	NA	96492323	96556028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.24	chr7	+	3012	1	NIC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	48132	4344	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96493979	96496991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96494000_96497000
ES.31367.25	chr7	+	2050	4	NNC	ENSMUSG00000048078.17	novel	11021	33	NA	NA	65397	31148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.25967446224258	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGTGTTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	96511244	96523795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96511972_96512656_96512890_96517156_96517312_96522860
ES.31367.26	chr7	+	1435	1	Intergenic	novelGene_25755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAGAAAA	6168	False	NA	NA	False	NA	NA	NA	96518790	96520225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96518800_96520200
ES.31367.28	chr7	+	3744	3	ISM	ENSMUSG00000048078.17	ENSMUST00000107165.8	10930	33	683528	190	98558	-190	3prime_fragment	FALSE	canonical	3	20	junction_1	4	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGTCTTAAGAATATGA	NA	False	NA	NA	False	GATAAA	-24	NA	96544405	96557571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96545475_96552051_96552195_96555039
ES.31367.29	chr7	+	1510	2	ISM	ENSMUSG00000048078.17	ENSMUST00000107165.8	10930	33	690906	1623	105936	-1623	3prime_fragment	FALSE	canonical	3	28	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTCCCTTTTTCTC	1612	False	NA	NA	False	NA	NA	NA	96551783	96556138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96552195_96555039
ES.31367.3	chr7	+	13599	32	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	-135	0	intron_retention	FALSE	canonical	1	4	junction_6	6.20009734407151	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCAGTGGCCTTTGTT	NA	False	NA	17	True	AATAAA	-20	NA	95859217	96560300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.30	chr7	+	2433	2	ISM	ENSMUSG00000048078.17	ENSMUST00000107165.8	10930	33	690913	693	105943	-693	3prime_fragment	FALSE	canonical	3	28	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTTGTTTTTGTTTT	1619	False	NA	NA	False	ATTAAA	-15	NA	96551790	96557068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96552195_96555039
ES.31367.31	chr7	+	5263	1	NIC	ENSMUSG00000048078.17	novel	13172	33	NA	NA	109190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCAGTGGCCTTTGTT	4866	False	NA	17	True	AATAAA	-20	NA	96555037	96560300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96555000_96560300
ES.31367.4	chr7	+	9318	32	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	-16	-1623	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	6.20009734407151	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTCCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	95859336	96556138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.5	chr7	+	2558	3	FSM	ENSMUSG00000048078.17	ENSMUST00000129445.8	2527	3	-8	-23	-8	23	multi-exon	FALSE	canonical	2	13	junction_1	5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCAACAACAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	95859344	96088196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_95859617_96004562_96004619_96085966
ES.31367.6	chr7	+	7812	25	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	-3	-31798	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.00694043031337	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAAGCACTGGAGGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	95859349	96525963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96522860
ES.31367.7	chr7	+	4297	21	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	5	149	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	5.38400408617973	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAGAAAAATGTAACAT	NA	False	NA	NA	False	NA	NA	NA	95859365	96492796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96145450_96145548_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132
ES.31367.8	chr7	+	13416	32	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	38	0	intron_retention	FALSE	canonical	0	0	junction_2	6.60085448383415	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCAGTGGCCTTTGTT	NA	False	NA	17	True	AATAAA	-20	NA	95859398	96560300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96145450_96145548_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31367.9	chr7	+	10183	32	NIC	ENSMUSG00000048078.17	novel	3560	5	NA	NA	42	-692	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	6.20009734407151	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTGTTTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	95859402	96557069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_95859617_96004562_96004619_96085966_96086066_96199218_96199507_96202684_96202955_96293205_96293416_96343976_96344233_96351848_96351948_96353132_96353369_96378555_96378733_96384891_96385107_96386557_96386769_96421210_96421313_96423181_96423377_96427025_96427227_96446526_96446713_96461039_96461187_96472936_96473154_96486482_96486603_96492132_96492395_96494903_96495172_96497202_96497347_96501539_96501790_96512656_96512890_96517156_96517312_96522860_96523739_96534523_96534697_96537880_96538117_96542065_96542363_96543859_96545475_96552051_96552195_96555039
ES.31368.1	chr7	-	3476	1	Intergenic	novelGene_25746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAAGTAGCCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	95875556	95872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_95872100_95875600
ES.31369.1	chr7	-	178	1	Intergenic	novelGene_25747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95908638	95908460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_95908500_95908600
ES.3137.1	chr10	+	2798	14	NNC	ENSMUSG00000033255.9	novel	2838	14	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGGTGTCTTGA	NA	False	NA	5	True	AATAAA	-18	NA	75790338	75845421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75790490_75800249_75800355_75802184_75802245_75810014_75810120_75812145_75812252_75814142_75814224_75821753_75821975_75828228_75828365_75829658_75829767_75831613_75831765_75836222_75836392_75840528_75840745_75841823_75841927_75844335
ES.3137.2	chr10	+	175	1	Intergenic	novelGene_2464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGACACTGTAGCTGTC	NA	False	NA	NA	False	NA	NA	NA	75800527	75800702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75800500_75800700
ES.3137.3	chr10	+	177	1	Intergenic	novelGene_2465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAGAGACAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75801573	75801750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75801600_75801800
ES.3137.4	chr10	+	178	1	Intergenic	novelGene_2466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75802818	75802996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75802800_75803000
ES.3137.5	chr10	+	1848	6	ISM	ENSMUSG00000033255.9	ENSMUST00000099577.4	2838	14	39295	5	19723	-5	3prime_fragment	FALSE	canonical	2	3	junction_3	1.89736659610103	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTTCAGGTGTCTTG	NA	False	NA	4	True	AATAAA	-17	NA	75829642	75845420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75829767_75831613_75831765_75836222_75836392_75840528_75840745_75841823_75841927_75844335
ES.3137.6	chr10	+	1330	6	ISM	ENSMUSG00000033255.9	ENSMUST00000099577.4	2838	14	39303	515	19731	-515	3prime_fragment	FALSE	canonical	2	3	junction_3	1.89736659610103	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCTGGCTTAAAAAAGAA	NA	False	NA	NA	False	AATACA	-20	NA	75829650	75844910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75829767_75831613_75831765_75836222_75836392_75840528_75840745_75841823_75841927_75844335
ES.31370.1	chr7	-	1465	1	Intergenic	novelGene_25748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCCCTTTTCTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	96277923	96276458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96276500_96277900
ES.31371.1	chr7	-	2954	1	Intergenic	novelGene_25749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGCAACTTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	96324826	96321872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96321900_96324800
ES.31372.1	chr7	-	188	1	Intergenic	novelGene_25750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCAGCAAACTG	NA	False	NA	NA	False	NA	NA	NA	96336194	96336006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96336000_96336200
ES.31373.1	chr7	-	2761	2	Antisense	novelGene_ENSMUSG00000048078.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATGCAAAGGAAGAATA	NA	False	NA	NA	False	NA	NA	NA	96351962	96341019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_96341560_96349741
ES.31374.1	chr7	-	1547	1	Intergenic	novelGene_25751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	96371959	96370412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96370400_96372000
ES.31375.1	chr7	-	1110	1	Intergenic	novelGene_25752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96393048	96391938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96391900_96393000
ES.31376.1	chr7	-	1268	1	Antisense	novelGene_ENSMUSG00000048078.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGGTTCGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	96543100	96541832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_96541800_96543100
ES.31377.1	chr7	+	2382	13	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-12	516	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	31.5571571385425	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTATGAAAGAAGTTA	7330	False	NA	2	True	ATTAAA	-14	NA	96600699	96712695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96706654_96706753_96708992_96709020_96711775
ES.31377.10	chr7	+	2699	14	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-18	-755	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	35.8192371705385	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAATTTTCAAAGTTT	7381	False	NA	NA	False	TATAAA	-15	NA	96600750	96713210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96600863_96605150_96605265_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.12	chr7	+	2466	13	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-18	520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	33.1813200460741	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAAAGAAGTTATTTT	7381	False	NA	6	True	ATTAAA	-18	NA	96600750	96712699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706769_96711771
ES.31377.14	chr7	+	2435	13	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	15	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	33.1813200460741	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTATGAAAGAAGTTA	7414	False	NA	2	True	ATTAAA	-14	NA	96600783	96712695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ES.31377.15	chr7	+	4218	13	ISM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	81	2235	24	-419	5prime_fragment	FALSE	canonical	3	94	junction_6	11.8611761642765	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGACTGAATTTACAA	7423	False	NA	NA	False	TATAAA	-20	NA	96600792	96711730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992
ES.31377.17	chr7	+	6698	12	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	8133	4225	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	33.1894138255355	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACCGTGATTGAACTTAA	5408	False	NA	NA	False	ATTAAA	-17	NA	96608901	96718190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775_96715722_96716331
ES.31377.18	chr7	+	165	1	Intergenic	novelGene_25756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	8621	False	NA	NA	False	NA	NA	NA	96627717	96627882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96627700_96627900
ES.31377.19	chr7	+	3825	1	Intergenic	novelGene_25757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTGTAATTGAGGTGGT	NA	False	NA	NA	False	TTTAAA	-4	NA	96634853	96638678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96634900_96638700
ES.31377.2	chr7	+	2511	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	4	1263	4	523	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAAGTTATTTTTAA	7346	False	NA	9	True	ATTAAA	-21	NA	96600715	96712702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.20	chr7	+	5930	9	NNC	ENSMUSG00000018995.13	novel	623	4	NA	NA	1723	520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.4271359879975	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAAAGAAGTTATTTT	1919	False	NA	6	True	ATTAAA	-18	NA	96674598	96712699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96677068_96677165_96679236_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.21	chr7	+	2640	5	ISM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	82336	1270	-3760	516	3prime_fragment	FALSE	canonical	3	103	junction_1	7	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTATGAAAGAAGTTA	NA	False	NA	2	True	ATTAAA	-14	NA	96683047	96712695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.22	chr7	+	940	5	ISM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	83739	1567	-2357	219	3prime_fragment	FALSE	canonical	3	103	junction_1	7	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTCCTTGCCATTT	NA	False	NA	NA	False	ACTAAA	-18	NA	96684450	96712398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.23	chr7	+	6010	1	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	17479	520	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAAAGAAGTTATTTT	9205	False	NA	6	True	ATTAAA	-18	NA	96706689	96712699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96706700_96712700
ES.31377.3	chr7	+	2414	13	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-4	515	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.0386978489703	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCTATGAAAGAAGTT	7354	False	NA	1	True	ATTAAA	-13	NA	96600723	96712694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.4	chr7	+	3759	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	19	0	3	0	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATACTGTTTGCGCTTCTT	7361	False	NA	NA	False	ATTAAA	-23	NA	96600730	96713965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.5	chr7	+	2085	13	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	18	511	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	40.4456940435773	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTAAAACCTATGAAAGA	7376	False	NA	-3	True	ATTAAA	-9	NA	96600745	96712690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_96600863_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.6	chr7	+	6873	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	37	-3132	-20	3132	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCTTCTGATGAATA	7379	False	NA	NA	False	GATAAA	-20	NA	96600748	96717097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.7	chr7	+	2380	13	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	-20	516	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	40.3680119511587	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCTATGAAAGAAGTTA	7379	False	NA	2	True	ATTAAA	-14	NA	96600748	96712695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96601152_96605150_96605265_96607281_96607403_96608877_96609019_96622688_96622770_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.8	chr7	+	1854	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	39	1885	-18	-69	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAAGGCTTTTCATGG	7381	False	NA	NA	False	AATAGA	-19	NA	96600750	96712080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31377.9	chr7	+	3025	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	39	714	-18	-714	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTTTTTAATTTAATT	7381	False	NA	NA	False	NA	NA	NA	96600750	96713251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ES.31378.1	chr7	-	4205	1	Intergenic	novelGene_25758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96658858	96654653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96654700_96658900
ES.31379.1	chr7	-	1742	1	Intergenic	novelGene_25759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCTCCCAAAGCCATGT	NA	False	NA	NA	False	NA	NA	NA	96683752	96682010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96682000_96683800
ES.3138.1	chr10	+	4859	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6964	-413	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	7918	False	NA	16	True	AATAAA	-18	NA	75861519	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75874067
ES.3138.10	chr10	+	4854	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-170	413	-166	-413	multi-exon	FALSE	canonical	3	112	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868317	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75874067
ES.3138.11	chr10	+	4939	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-46	-269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868437	75878799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75869447_75869509_75874067
ES.3138.12	chr10	+	4922	4	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-46	-409	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.8074069840786	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTTTTTTTTTTTTT	NA	False	NA	20	True	AATAAA	-22	NA	75868437	75878659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75868786_75868910_75869447_75869509_75874067
ES.3138.13	chr10	+	4851	3	FSM	ENSMUSG00000049764.9	ENSMUST00000218627.2	378	3	-38	-4435	-38	-411	multi-exon	FALSE	canonical	3	22	junction_2	4	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTCTTTTTTTTTTT	NA	False	NA	18	True	AATAAA	-20	NA	75868445	75878657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75868786_75868910_75874067
ES.3138.14	chr10	+	4875	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-42	264	-38	-264	multi-exon	FALSE	canonical	3	112	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATCTTATTTATTA	NA	False	NA	17	True	AATAAA	-25	NA	75868445	75878804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75874067
ES.3138.15	chr10	+	4766	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-38	-419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAACCTTTTCTGTCTTT	NA	False	NA	10	True	AATAAA	-12	NA	75868445	75878649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75869462_75869509_75874067
ES.3138.17	chr10	+	4653	4	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-34	-416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.7106781186548	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	75868449	75878652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75869447_75869509_75874067_75874182_75874308
ES.3138.18	chr10	+	4762	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-29	-413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868454	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868568_75869447_75869509_75874067
ES.3138.19	chr10	+	4670	4	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-23	-416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.7106781186548	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	75868460	75878652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75869447_75869509_75874067_75875314_75875412
ES.3138.2	chr10	+	5010	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6961	-259	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTATTTATTATTGTG	7921	False	NA	22	True	AATAAA	-30	NA	75861522	75878809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75874067
ES.3138.20	chr10	+	5186	2	NIC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-23	-264	intron_retention	FALSE	canonical	3	22	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATCTTATTTATTA	NA	False	NA	17	True	AATAAA	-25	NA	75868460	75878804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75868910_75874067
ES.3138.21	chr10	+	4856	2	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-23	-252	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	0	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTATTGTGTGTATGA	NA	False	NA	29	True	AATAAA	-37	NA	75868460	75878816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868568_75874067
ES.3138.22	chr10	+	5248	3	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-19	-259	intron_retention	FALSE	non_canonical	0	0	junction_1	75	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTATTTATTATTGTG	NA	False	NA	22	True	AATAAA	-30	NA	75868464	75878809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868910_75869447_75869509_75874067
ES.3138.25	chr10	+	4689	2	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-17	-413	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	0	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868466	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868568_75874067
ES.3138.26	chr10	+	5029	2	NIC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-15	-413	intron_retention	FALSE	canonical	3	22	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868468	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75868910_75874067
ES.3138.27	chr10	+	2992	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-19	2124	-15	-2124	multi-exon	FALSE	canonical	3	112	junction_1	0	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTAGTCACACTTTGTG	NA	False	NA	NA	False	ATTAAA	-30	NA	75868468	75876944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75874067
ES.3138.28	chr10	+	4969	3	FSM	ENSMUSG00000049764.9	ENSMUST00000218627.2	378	3	-14	-4577	-14	-269	multi-exon	FALSE	canonical	3	22	junction_2	4	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868469	75878799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75868786_75868910_75874067
ES.3138.29	chr10	+	4891	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-14	-269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868469	75878799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868568_75869447_75869509_75874067
ES.3138.3	chr10	+	5291	5	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6920	-269	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.6659346803403	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	7962	False	NA	12	True	AATAAA	-20	NA	75861563	75878799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75868435_75868584_75868786_75868910_75869447_75869509_75874067
ES.3138.30	chr10	+	4581	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-17	533	-13	-533	multi-exon	FALSE	canonical	3	112	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTTTGTTACTCTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	75868470	75878535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75874067
ES.3138.31	chr10	+	8256	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	-7	-3152	-3	3152	multi-exon	FALSE	canonical	3	112	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGGTCCTTTCGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	75868480	75882220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_75868584_75874067
ES.3138.33	chr10	+	4792	5	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-1	-413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	61.8465843842649	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868486	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75868786_75868910_75869447_75869509_75874067_75874258_75874334
ES.3138.36	chr10	+	3003	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	15	-2124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTAGTCACACTTTGTG	NA	False	NA	NA	False	ATTAAA	-30	NA	75868502	75876944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868568_75869447_75869509_75874067
ES.3138.37	chr10	+	4748	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	23	-265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAATCTTATTTATT	NA	False	NA	16	True	AATAAA	-24	NA	75868510	75878803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75874067_75877473_75877533
ES.3138.38	chr10	+	4965	4	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	24	-418	intron_retention	FALSE	non_canonical	0	0	junction_1	70.7106781186548	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACCTTTTCTGTCTTTT	NA	False	NA	11	True	AATAAA	-13	NA	75868511	75878650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868910_75869447_75869509_75874067_75874258_75874334
ES.3138.39	chr10	+	5689	1	NIC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	4475	-417	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTTTTCTGTCTTTTT	NA	False	NA	12	True	AATAAA	-14	NA	75872962	75878651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_75873000_75878700
ES.3138.4	chr10	+	5027	4	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-6920	-410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.476158301151	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTTTTTTTTTTTT	7962	False	NA	19	True	AATAAA	-21	NA	75861563	75878658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75868435_75868584_75869447_75869509_75874067
ES.3138.5	chr10	+	5096	5	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6888	-416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	64.8088535618398	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	7994	False	NA	13	True	AATAAA	-15	NA	75861595	75878652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75868435_75868568_75868786_75868910_75869447_75869509_75874067
ES.3138.6	chr10	+	5477	4	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6881	-416	intron_retention	FALSE	canonical	0	0	junction_1	70.476158301151	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	8001	False	NA	13	True	AATAAA	-15	NA	75861602	75878652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75861791_75868265_75868910_75869448_75869509_75874067
ES.3138.7	chr10	+	5278	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-4459	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75864024	75878799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75864571_75874067
ES.3138.8	chr10	+	5973	3	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-898	-413	intron_retention	FALSE	non_canonical	0	0	junction_1	75	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75867585	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868910_75869447_75869509_75874067
ES.3138.9	chr10	+	4974	3	NNC	ENSMUSG00000049764.9	novel	5097	2	NA	NA	-225	-413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCTGTCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	75868258	75878655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_75868584_75869447_75869509_75874067
ES.31380.1	chr7	-	1654	1	Intergenic	novelGene_25760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTTAGAAGTATTTAC	NA	False	NA	NA	False	NA	NA	NA	96721320	96719666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96719700_96721300
ES.31381.1	chr7	+	2992	1	Intergenic	novelGene_25761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTACATAATGTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	96722614	96725606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_96722600_96725600
ES.31382.1	chr7	+	6047	11	NNC	ENSMUSG00000004508.7	novel	6168	10	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGATGTTGACTCTGGAG	NA	False	NA	NA	False	AAAAAG	-2	NA	96730836	96958155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952230_96952337_96953356_96953483_96954082_96956207_96956285
ES.31382.2	chr7	+	5257	11	NNC	ENSMUSG00000004508.7	novel	2065	10	NA	NA	-48	-687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.48660687473185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTAGACTGCTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	96730934	96957466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952233_96952337_96953356_96953483_96954082_96956207_96956285
ES.31382.3	chr7	+	5324	10	FSM	ENSMUSG00000004508.7	ENSMUST00000004622.7	6168	10	154	690	-36	-690	multi-exon	FALSE	canonical	0	0	junction_1	1.33333333333333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGAGTAGACTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	96730946	96957463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952230_96952337_96953356_96953483_96954082
ES.31383.1	chr7	-	158	1	Intergenic	novelGene_25762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	96933052	96932894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96932900_96933100
ES.31384.1	chr7	-	177	1	Intergenic	novelGene_25763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGAAGTTT	6446	False	NA	NA	False	NA	NA	NA	96945415	96945238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_96945200_96945400
ES.31385.1	chr7	+	3067	2	NNC	ENSMUSG00000044952.6	novel	2966	2	NA	NA	-410	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	False	NA	NA	False	GATAAA	-7	NA	96981123	96999420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_96981270_96996499
ES.31385.2	chr7	+	2971	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	-5	0	-5	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	False	NA	NA	False	GATAAA	-7	NA	96981528	96999420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_96981579_96996499
ES.31386.1	chr7	-	4397	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	-161	26	-161	0	multi-exon	FALSE	canonical	2	4	junction_5	1.83303027798234	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCAGGATGCTGTTC	NA	False	NA	0	True	AATAAA	-16	NA	96981388	96958612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
ES.31386.2	chr7	-	9156	11	NIC	ENSMUSG00000035713.16	novel	4262	11	NA	NA	-33	0	intron_retention	FALSE	canonical	2	3	junction_5	2.00249843945008	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCAGGATGCTGTTC	NA	False	NA	0	True	AATAAA	-16	NA	96981260	96958612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96964286_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
ES.31386.3	chr7	-	2413	3	NNC	ENSMUSG00000035713.16	novel	2659	8	NA	NA	1913	-2	intron_retention	FALSE	canonical	0	0	junction_1	4.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96962319	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_96959698_96960559_96961833_96962262
ES.31386.4	chr7	-	4046	9	NIC	ENSMUSG00000035713.16	novel	4262	11	NA	NA	-100	-2	intron_retention	FALSE	canonical	0	0	junction_3	2.78388218141501	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96981327	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_96959704_96960559_96961833_96962262_96962370_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
ES.31386.5	chr7	-	4354	12	NNC	ENSMUSG00000035713.16	novel	4262	11	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_10	3.17010832257504	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96981240	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96979748_96979856_96981043
ES.31386.6	chr7	-	7169	6	NNC	ENSMUSG00000035713.16	novel	2659	8	NA	NA	-3244	-2	intron_retention	FALSE	canonical	0	0	junction_2	3.91918358845309	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96968446	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_96959704_96959956_96960057_96960559_96961833_96962262_96962370_96962705_96962800_96963940
ES.31386.7	chr7	-	6005	8	FSM	ENSMUSG00000035713.16	ENSMUST00000181651.3	2659	8	-3348	2	-3347	-2	multi-exon	FALSE	canonical	0	0	junction_6	3.94347821195493	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96968549	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_96959704_96960559_96961082_96961458_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96964293_96964386_96965016
ES.31386.8	chr7	-	4855	4	NIC	ENSMUSG00000035713.16	novel	2659	8	NA	NA	-694	-2	intron_retention	FALSE	canonical	2	9	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCAGGATGCTGT	NA	False	NA	-2	True	AATAAA	-14	NA	96965896	96958614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_96959704_96960559_96961833_96962262_96962800_96963940
ES.31386.9	chr7	-	5228	10	NIC	ENSMUSG00000035713.16	novel	4262	11	NA	NA	-44	-3	intron_retention	FALSE	canonical	2	4	junction_5	1.88561808316413	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCTGTGCAGGATGCTG	NA	False	NA	-3	True	AATAAA	-13	NA	96981271	96958615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96975268_96981043
ES.31387.1	chr7	+	2174	14	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	-12	-37	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	47.582130801359	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCATCAAATAGCAAAGT	NA	False	NA	26	True	TATAAA	-15	NA	97020800	97041355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020940_97022875_97022955_97023933_97024094_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.10	chr7	+	2169	14	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	17	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.6869073766467	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAAAGTGTTTTGGG	NA	False	NA	34	True	TATAAA	-23	NA	97020829	97041363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020940_97022875_97022955_97023933_97024144_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.11	chr7	+	3249	7	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	18	-7771	intron_retention	FALSE	canonical	3	115	junction_6	13.7921072437181	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTTTTGTGCGTGG	NA	False	NA	NA	False	NA	NA	NA	97020830	97033085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97031908_97032125_97032230_97032892
ES.31387.12	chr7	+	7216	11	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	18	-31	intron_retention	FALSE	canonical	3	13	junction_7	37.2237827201911	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGCAAAGTGTTTTG	NA	False	NA	32	True	TATAAA	-21	NA	97020830	97041361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97031908_97032125_97032230_97032892_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.13	chr7	+	2490	7	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	18	-7778	intron_retention	FALSE	canonical	3	115	junction_6	13.7921072437181	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTGCCCGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	97020830	97033078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
ES.31387.14	chr7	+	5326	13	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	18	-35	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	47.0841445357847	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATCAAATAGCAAAGTGT	NA	False	NA	28	True	TATAAA	-17	NA	97020830	97041357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020940_97022875_97022955_97023933_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.15	chr7	+	1796	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	20	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.8971819050787	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAAAGTGTTTTGGG	NA	False	NA	34	True	TATAAA	-23	NA	97020832	97041363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.16	chr7	+	5582	11	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	21	-25	intron_retention	FALSE	canonical	1	2	junction_1	52.0270122148101	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAAGTGTTTTGGGTCCT	NA	False	NA	38	True	TATAAA	-27	NA	97020833	97041367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020905_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.17	chr7	+	4989	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	21	-24	intron_retention	FALSE	canonical	3	93	junction_8	18.2231348737834	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGTGTTTTGGGTCCTT	NA	False	NA	39	True	TATAAA	-28	NA	97020833	97041368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.18	chr7	+	1833	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	22	-29	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	49.7230345543115	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAAAGTGTTTTGGG	NA	False	NA	34	True	TATAAA	-23	NA	97020834	97041363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.19	chr7	+	1488	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	23	26	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	39.9294832969779	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCAAGCAATTACTTCA	NA	False	NA	3	True	AATAAA	-15	NA	97020835	97040985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.2	chr7	+	1647	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	-9	401	-9	-26	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATTACTTCATGGGTA	NA	False	NA	9	True	AATAAA	-21	NA	97020803	97040991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.20	chr7	+	1864	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	23	-31	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	39.9294832969779	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAGCAAAGTGTTTTG	NA	False	NA	32	True	TATAAA	-21	NA	97020835	97041361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.21	chr7	+	7115	10	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	23	-38	intron_retention	FALSE	canonical	3	13	junction_6	39.2327653440745	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGCATCAAATAGCAAAG	NA	False	NA	25	True	TATAAA	-14	NA	97020835	97041354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97029125_97029447_97029516_97031780_97031908_97032125_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.22	chr7	+	5571	10	NNC	ENSMUSG00000035704.18	novel	899	5	NA	NA	3191	-26	intron_retention	FALSE	canonical	0	0	junction_1	55.1603722491669	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	NA	False	NA	37	True	TATAAA	-26	NA	97024003	97041366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97024144_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.23	chr7	+	3836	6	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	3448	8314	3448	-7778	internal_fragment	FALSE	canonical	3	115	junction_5	15.1842023168818	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTGCCCGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	97024260	97033078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
ES.31387.24	chr7	+	3838	11	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	4374	-36	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	52.3630594980851	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCATCAAATAGCAAAGTG	NA	False	NA	27	True	TATAAA	-16	NA	97025186	97041356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040141_97040169_97040734
ES.31387.25	chr7	+	5573	3	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	8731	5395	-6300	-4859	internal_fragment	FALSE	canonical	3	115	junction_2	15.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTCTAGGTTTGAAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	97029543	97035997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97031908_97032125_97032230_97032892
ES.31387.3	chr7	+	2015	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	-3	27	-3	-27	multi-exon	FALSE	canonical	3	93	junction_8	19.8289560996034	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAAGTGTTTTGGGTC	NA	False	NA	36	True	TATAAA	-25	NA	97020809	97041365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.4	chr7	+	1773	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	6	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	48.8382386426764	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATAGCAAAGTGTTTT	NA	False	NA	31	True	TATAAA	-20	NA	97020818	97041360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.6	chr7	+	7020	10	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	11	-29	intron_retention	FALSE	canonical	0	0	junction_3	43.0816050230029	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAAAGTGTTTTGGG	NA	False	NA	34	True	TATAAA	-23	NA	97020823	97041363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020940_97022875_97022955_97027307_97027358_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.7	chr7	+	3905	8	ISM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	12	5392	12	-4856	5prime_fragment	FALSE	canonical	3	115	junction_7	14.6175739911846	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTAGGTTTGAAATTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	97020824	97036000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892
ES.31387.8	chr7	+	4961	12	NIC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	13	-26	intron_retention	FALSE	canonical	3	13	junction_8	36.8357982546578	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAAGTGTTTTGGGTCC	NA	False	NA	37	True	TATAAA	-26	NA	97020825	97041366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
ES.31387.9	chr7	+	1846	13	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	17	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.2324760147995	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATAGCAAAGTGTTTT	NA	False	NA	31	True	TATAAA	-20	NA	97020829	97041360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97020940_97022875_97022955_97027307_97027358_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ES.31388.1	chr7	+	646	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	45	-8	45	8	multi-exon	FALSE	canonical	3	2164	junction_2	233	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTCTGCTTATTTTA	NA	False	NA	29	True	ATTAAA	-28	NA	97049254	97057017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97049565_97056072_97056217_97056825
ES.31388.2	chr7	+	1208	2	FSM	ENSMUSG00000030647.9	ENSMUST00000149122.2	470	2	-24	-714	-24	-8	multi-exon	FALSE	canonical	3	2630	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATCTGTTCCTTTCCT	NA	False	NA	13	True	ATTAAA	-12	NA	97049285	97057001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97049565_97056072
ES.31389.1	chr7	-	1278	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	4	-5	4	5	multi-exon	FALSE	canonical	3	27	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGTCTTTTATTTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	97066933	97062139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97062723_97066238
ES.3139.1	chr10	-	179	2	Antisense	novelGene_ENSMUSG00000082619.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGGAATTGG	NA	False	NA	NA	False	NA	NA	NA	75806362	75726593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_75726674_75806263
ES.3139.10	chr10	-	3186	8	NIC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	19	0	intron_retention	FALSE	canonical	3	914	junction_4	77.9905802789343	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	6908	False	NA	-8	True	AATAAA	-14	NA	75757404	75732608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75752746_75757136
ES.3139.11	chr10	-	5995	8	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	20	-2	-5	0	intron_retention	FALSE	canonical	3	799	junction_7	124.874140719399	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	6884	False	NA	-8	True	AATAAA	-14	NA	75757428	75732608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633
ES.3139.12	chr10	-	1584	10	NNC	ENSMUSG00000000902.14	novel	1622	9	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	439.259253013553	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTCTGTGCAGTAGCAT	6890	False	NA	-9	True	AATAAA	-13	NA	75757422	75732609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75732923_75733278_75733411_75736579_75736598_75740248_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ES.3139.15	chr10	-	3056	8	NIC	ENSMUSG00000000902.14	novel	1622	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	799	junction_6	126.815630273372	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTCTGTGCAGTAGCA	6885	False	NA	-10	True	AATAAA	-12	NA	75757427	75732610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75732923_75733278_75733411_75740217_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ES.3139.16	chr10	-	1049	5	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	40	13108	15	379	5prime_fragment	FALSE	canonical	3	799	junction_3	127.840721211983	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATGTGTCTCTGAAG	6904	False	NA	NA	False	NA	NA	NA	75757408	75745718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ES.3139.17	chr10	-	6024	1	NIC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	7	-5295	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTCATACTTGCATTGT	6896	False	NA	NA	False	AAGAAA	-18	NA	75757416	75751392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75751400_75757400
ES.3139.18	chr10	-	3247	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	30	-989	3	989	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGGCTCTGTTCAACA	5086	False	NA	NA	False	NA	NA	NA	75768306	75758066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.19	chr10	-	3040	7	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	-14	5	intron_retention	FALSE	canonical	3	194	junction_2	15.0489940601431	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTTTCTTTGCAAT	5042	False	NA	2	True	ATTAAA	-22	NA	75768350	75759050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.2	chr10	-	158	1	Intergenic	novelGene_2457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAATAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	75727380	75727222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75727200_75727400
ES.3139.20	chr10	-	3785	6	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	2	4	intron_retention	FALSE	canonical	3	194	junction_2	16.451139778143	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTTTTTCTTTGCAA	5085	False	NA	1	True	ATTAAA	-21	NA	75768307	75759051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75764344_75768167
ES.3139.21	chr10	-	3973	4	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	36	3	intron_retention	FALSE	canonical	3	194	junction_2	20.3141986469235	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTTTTTCTTTGCA	5119	False	NA	0	True	ATTAAA	-20	NA	75768273	75759052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75762462_75762581_75764344_75768167
ES.3139.22	chr10	-	5455	2	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	3	1	intron_retention	FALSE	canonical	3	211	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGTCTGTTTTTCTTTG	5059	False	NA	-2	True	ATTAAA	-18	NA	75768333	75759054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75764344_75768167
ES.3139.23	chr10	-	3357	4	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	211	junction_3	13.3666251038423	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5063	False	NA	-3	True	ATTAAA	-17	NA	75768329	75759055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75763325_75764113_75764344_75768167
ES.3139.24	chr10	-	2280	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	6	2	6	-1	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5062	False	NA	-5	True	ATTAAA	-15	NA	75768330	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.25	chr10	-	2298	9	NNC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_3	95.222026732264	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5091	False	NA	-5	True	ATTAAA	-15	NA	75768301	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75761512_75761855_75761903_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.26	chr10	-	3863	5	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	194	junction_2	17.5926120857592	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5085	False	NA	-5	True	ATTAAA	-15	NA	75768307	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75764344_75768167
ES.3139.27	chr10	-	2628	8	NNC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_2	77.832892684735	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5105	False	NA	-5	True	ATTAAA	-15	NA	75768287	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75761903_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.28	chr10	-	2648	8	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_2	77.1444444281145	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5083	False	NA	-5	True	ATTAAA	-15	NA	75768309	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75761512_75761855_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.29	chr10	-	1741	9	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	71.7896232055859	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5059	False	NA	-5	True	ATTAAA	-15	NA	75768333	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759325_75759866_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.3	chr10	-	1638	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	-8	-8	-5	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6856	False	NA	-2	True	AATAAA	-20	NA	75757456	75732602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ES.3139.30	chr10	-	1789	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	2	2	2	-1	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5085	False	NA	-5	True	ATTAAA	-15	NA	75768307	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.31	chr10	-	2205	9	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	82.3323106380478	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5058	False	NA	-5	True	ATTAAA	-15	NA	75768334	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759325_75759792_75759950_75761253_75761512_75761855_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.32	chr10	-	4507	3	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	-2133	-1	intron_retention	FALSE	canonical	3	221	junction_2	11	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	7735	False	NA	-5	True	ATTAAA	-15	NA	75765657	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75763325_75764113
ES.3139.34	chr10	-	2578	8	NIC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	2	-1	intron_retention	FALSE	canonical	3	68	junction_1	53.93571381274	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5085	False	NA	-5	True	ATTAAA	-15	NA	75768307	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75764344_75768167
ES.3139.35	chr10	-	2226	8	NNC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	27	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	78.1186956640016	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5110	False	NA	-5	True	ATTAAA	-15	NA	75768282	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75761512_75762244_75762462_75762587_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ES.3139.36	chr10	-	4073	3	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	51	-1	intron_retention	FALSE	canonical	3	211	junction_2	16	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	5134	False	NA	-5	True	ATTAAA	-15	NA	75768258	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759950_75761253_75764344_75768167
ES.3139.37	chr10	-	2686	6	NNC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	-677	-1	intron_retention	FALSE	canonical	0	0	junction_5	89.5464125467905	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	9	True	NA	-5	True	ATTAAA	-15	NA	75764201	75759057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763303_75764113
ES.3139.38	chr10	-	2921	7	NNC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	82.1572002660482	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5083	False	NA	-6	True	ATTAAA	-14	NA	75768309	75759058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763027_75763180_75763325_75764113_75764344_75768167
ES.3139.39	chr10	-	2276	8	NNC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	2	-2	intron_retention	FALSE	canonical	2	5	junction_6	75.4069233004016	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5085	False	NA	-6	True	ATTAAA	-14	NA	75768307	75759058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763345_75764113_75764344_75768167
ES.3139.4	chr10	-	1658	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	2	0	-1	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6863	False	NA	-2	True	AATAAA	-20	NA	75757449	75732602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ES.3139.40	chr10	-	3384	6	NIC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	79	-2	intron_retention	FALSE	canonical	3	8	junction_1	87.3004009154597	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5162	False	NA	-6	True	ATTAAA	-14	NA	75768230	75759058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75759325_75759761_75759950_75761253_75762824_75762962_75763097_75763180_75764344_75768167
ES.3139.41	chr10	-	4328	5	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	51	-2	intron_retention	FALSE	canonical	3	194	junction_1	10.1612007164508	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTGTCTGTTTTTC	5134	False	NA	-6	True	ATTAAA	-14	NA	75768258	75759058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75762462_75762581_75762824_75762962_75763325_75764113_75764344_75768167
ES.3139.42	chr10	-	205	1	Intergenic	novelGene_2458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGGGGGGGC	2895	False	NA	NA	False	NA	NA	NA	75770497	75770292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75770300_75770500
ES.3139.43	chr10	-	175	1	Intergenic	novelGene_2459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGGGGGGCAGGGGG	2704	False	NA	NA	False	NA	NA	NA	75770688	75770513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75770500_75770700
ES.3139.44	chr10	-	3492	4	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	-107	1046	intron_retention	FALSE	canonical	3	20	junction_2	7.58653778449403	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTAGTGCATGTCAGTCT	4809	False	NA	NA	False	NA	NA	NA	75776613	75772510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.45	chr10	-	1214	7	NNC	ENSMUSG00000050157.7	novel	714	7	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	11.8988794990677	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATGTCTCCTGTTA	4918	False	NA	NA	False	AGTAAA	-44	NA	75776504	75773554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75774188_75775006_75775166_75775239_75775315_75775546_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.46	chr10	-	2236	3	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	187	2	intron_retention	FALSE	canonical	3	20	junction_2	9	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATGTCTCCTGTTA	5164	False	NA	NA	False	AGTAAA	-44	NA	75776258	75773554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75775673_75775764_75775852_75776227
ES.3139.47	chr10	-	1250	7	FSM	ENSMUSG00000050157.7	ENSMUST00000219979.2	714	7	-81	-455	-20	2	multi-exon	FALSE	canonical	3	20	junction_5	8.23441288469042	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATGTCTCCTGTTA	4896	False	NA	NA	False	AGTAAA	-44	NA	75776526	75773554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775546_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.48	chr10	-	1535	5	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	1	2	intron_retention	FALSE	canonical	3	20	junction_3	7.17635004720366	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATGTCTCCTGTTA	4917	False	NA	NA	False	AGTAAA	-44	NA	75776505	75773554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75774191_75774995_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.49	chr10	-	1195	7	NNC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.2591687354659	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	4928	False	NA	NA	False	AGTAAA	-42	NA	75776494	75773556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75774188_75775006_75775166_75775239_75775315_75775553_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.5	chr10	-	7622	7	ISM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	8	0	5	0	intron_retention	FALSE	canonical	3	914	junction_4	83.7006902931843	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6869	False	NA	-2	True	AATAAA	-20	NA	75757443	75732602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897
ES.3139.50	chr10	-	1876	4	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	-531	-541	intron_retention	FALSE	canonical	3	20	junction_2	7.58653778449403	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4385	False	NA	NA	False	NA	NA	NA	75777037	75774550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75775673_75775764_75775852_75776227_75776255_75776397
ES.3139.51	chr10	-	1564	2	NIC	ENSMUSG00000050157.7	novel	1221	7	NA	NA	16	-541	intron_retention	FALSE	canonical	3	20	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4932	False	NA	NA	False	NA	NA	NA	75776490	75774550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75775852_75776227
ES.3139.52	chr10	-	4891	2	Genic_Genomic	ENSMUSG00000082234.2	novel	393	1	NA	NA	-5154	452	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATTTATCAATAAACT	3268	False	NA	NA	False	AATAAA	-24	NA	75786675	75780676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_75785445_75786552
ES.3139.53	chr10	-	2396	2	Antisense	novelGene_ENSMUSG00000000903.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAGTTTTGTGACTCTA	3524	False	NA	NA	False	NA	NA	NA	75786419	75783370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_75785445_75786097
ES.3139.54	chr10	-	774	2	Antisense	novelGene_ENSMUSG00000000903.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCATTACTGTCCTG	8317	False	NA	NA	False	GGGGCT	-19	NA	75790264	75784777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_75785445_75790157
ES.3139.55	chr10	-	174	1	Intergenic	novelGene_2460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGGAGAGGGATCA	6913	False	NA	-1	True	NA	NA	NA	75791668	75791494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75791500_75791700
ES.3139.56	chr10	-	207	1	Intergenic	novelGene_2461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGGGATCGGGGCTGGC	6695	False	NA	NA	False	TTTAAA	-14	NA	75791886	75791679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75791700_75791900
ES.3139.57	chr10	-	170	2	Antisense	novelGene_ENSMUSG00000098817.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	75870647	75791712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_75791832_75870596
ES.3139.58	chr10	-	160	1	Intergenic	novelGene_2462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	5820	False	NA	NA	False	NA	NA	NA	75792761	75792601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75792600_75792800
ES.3139.59	chr10	-	179	1	Intergenic	novelGene_2463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAAATAGAAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	75798683	75798504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75798500_75798700
ES.3139.6	chr10	-	4999	8	NIC	ENSMUSG00000000902.14	novel	1622	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	799	junction_6	125.091639877919	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGTGCAGTAGCATAAA	6898	False	NA	-6	True	AATAAA	-16	NA	75757414	75732606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75751028_75752633_75752746_75757136
ES.3139.60	chr10	-	197	1	Intergenic	novelGene_2467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGATTATTTGCATTT	NA	False	NA	NA	False	NA	NA	NA	75806364	75806167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75806200_75806400
ES.3139.61	chr10	-	218	1	Intergenic	novelGene_2468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATGAGCAAAAC	7283	False	NA	NA	False	NA	NA	NA	75815251	75815033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75815000_75815300
ES.3139.62	chr10	-	176	1	Intergenic	novelGene_2469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAATAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75839274	75839098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75839100_75839300
ES.3139.63	chr10	-	163	1	Intergenic	novelGene_2470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCAAAAGATGAATGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	75867765	75867602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75867600_75867800
ES.3139.7	chr10	-	1383	7	NIC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	367.805844011333	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	6863	False	NA	-8	True	AATAAA	-14	NA	75757449	75732608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75757136
ES.3139.8	chr10	-	6061	8	NNC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	1629	0	intron_retention	FALSE	canonical	0	0	junction_3	482.202938055533	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	8518	False	NA	-8	True	AATAAA	-14	NA	75755794	75732608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75732923_75733278_75733411_75739581_75739676_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897
ES.3139.9	chr10	-	1507	9	NNC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	486	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	423.098688251335	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	7375	False	NA	-8	True	AATAAA	-14	NA	75756937	75732608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75756769
ES.31390.1	chr7	+	2087	3	NNC	ENSMUSG00000051727.15	novel	2340	3	NA	NA	24	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCATGTGTTCGTGGTGG	827	False	NA	NA	False	AATAAA	-12	NA	97102452	97108758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97102670_97106800_97108244_97108331
ES.31391.1	chr7	+	174	1	Intergenic	novelGene_25764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATCCTCTCTGGG	7639	False	NA	NA	False	NA	NA	NA	97119321	97119495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97119300_97119500
ES.31392.1	chr7	+	174	1	Intergenic	novelGene_25765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	9817	False	NA	NA	False	NA	NA	NA	97121499	97121673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97121500_97121700
ES.31393.1	chr7	+	3209	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	103.999841067901	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	931	False	NA	28	True	AATAAA	-16	NA	97130160	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183613_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.11	chr7	+	3115	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	106.665284854995	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	989	False	NA	28	True	AATAAA	-16	NA	97130218	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.12	chr7	+	7296	13	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	56	19475	-1	7682	intron_retention	FALSE	canonical	3	369	junction_9	39.6123577799768	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAATAAATAA	989	False	NA	NA	False	NA	NA	NA	97130218	97171126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432
ES.31393.14	chr7	+	5884	13	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	57	20886	0	6271	intron_retention	FALSE	canonical	3	369	junction_9	39.6123577799768	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGGTTCTTTCTTTCTA	990	False	NA	NA	False	AATAAA	-15	NA	97130219	97169715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432
ES.31393.15	chr7	+	6804	12	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	1	7281	intron_retention	FALSE	canonical	0	0	junction_6	131.517211267211	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAGAAGTTGTCAATGAC	991	False	NA	NA	False	NA	NA	NA	97130220	97170725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432
ES.31393.16	chr7	+	3198	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	104.214109306333	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCTAGCTGTTCTAG	991	False	NA	19	True	AATAAA	-7	NA	97130220	97190595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156900_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.2	chr7	+	3245	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	0	-5	0	4	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTAGTTTCTGGTCCT	933	False	NA	30	True	AATAAA	-18	NA	97130162	97190606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.20	chr7	+	6071	21	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_6	142.31172650207	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	992	False	NA	28	True	AATAAA	-16	NA	97130221	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150045_97150210_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97178502_97179506_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.21	chr7	+	2346	13	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	60	24421	3	2736	5prime_fragment	FALSE	canonical	3	369	junction_9	39.6123577799768	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTCTGATTTTAAAGCT	993	False	NA	NA	False	AATAGA	-18	NA	97130222	97166180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432
ES.31393.23	chr7	+	3171	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.396692895265	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	993	False	NA	27	True	AATAAA	-15	NA	97130222	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134126_97134319_97136566_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.26	chr7	+	5670	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	7	2	intron_retention	FALSE	canonical	3	369	junction_9	43.9026443038543	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	997	False	NA	28	True	AATAAA	-16	NA	97130226	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.29	chr7	+	2747	20	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	146.009315530231	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCTAGCTGTTCTAG	1000	False	NA	19	True	AATAAA	-7	NA	97130229	97190595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.3	chr7	+	3199	24	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	136.907347969955	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	979	False	NA	27	True	AATAAA	-15	NA	97130208	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97165683_97165687_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.31	chr7	+	3448	22	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	107.764103674722	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	1011	False	NA	27	True	AATAAA	-15	NA	97130240	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165967_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.34	chr7	+	5706	21	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	24	1	intron_retention	FALSE	canonical	3	23	junction_5	105.423953634836	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	1014	False	NA	27	True	AATAAA	-15	NA	97130243	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.38	chr7	+	3050	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	139.121654355977	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTCTAGTTTCTG	1042	False	NA	25	True	AATAAA	-13	NA	97130271	97190601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97165913_97165967_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.4	chr7	+	6559	14	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	7281	intron_retention	FALSE	non_canonical	0	0	junction_13	124.240699769801	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAGAAGTTGTCAATGAC	980	False	NA	NA	False	NA	NA	NA	97130209	97170725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165988_97166332
ES.31393.41	chr7	+	3067	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	63	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	130.14639722537	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCTAGCTGTTCTAG	1053	False	NA	19	True	AATAAA	-7	NA	97130282	97190595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140181_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.43	chr7	+	2928	22	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	4039	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.496622316814	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	418	False	NA	27	True	AATAAA	-15	NA	97134258	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97134319_97136558_97136693_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.44	chr7	+	2629	19	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	14699	-2	-6124	1	3prime_fragment	FALSE	canonical	3	369	junction_5	45.9437726673983	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	4512	False	NA	27	True	AATAAA	-15	NA	97144861	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.45	chr7	+	4670	7	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	20801	19907	-22	7250	intron_retention	FALSE	canonical	3	369	junction_2	38.3597734902361	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	2075	False	NA	NA	False	NA	NA	NA	97150963	97170694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828
ES.31393.46	chr7	+	154	1	Intergenic	novelGene_25767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAATAATAAATAAATCT	5029	False	NA	NA	False	NA	NA	NA	97153917	97154071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97153900_97154100
ES.31393.47	chr7	+	6292	4	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	26759	19402	5936	7755	intron_retention	FALSE	canonical	3	379	junction_3	40.6530031690977	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGTTTGACTAAGTGGT	8033	False	NA	NA	False	ATTAAA	-6	NA	97156921	97171199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97157098_97158797_97159004_97162733_97162877_97165432
ES.31393.48	chr7	+	4909	12	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	11818	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	141.609870319483	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACCTAGCTGTTCTAG	142	False	NA	19	True	AATAAA	-7	NA	97162803	97190595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180879_97181177_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.5	chr7	+	3052	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_20	102.131723224906	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	980	False	NA	28	True	AATAAA	-16	NA	97130209	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97187106_97187228_97190218
ES.31393.6	chr7	+	3371	24	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.370616994953	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTCTAGTTTCTGGT	980	False	NA	27	True	AATAAA	-15	NA	97130209	97190603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97133146_97133323_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31393.8	chr7	+	4328	15	ISM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	51	19876	4	7281	5prime_fragment	FALSE	canonical	3	369	junction_9	37.2317617315197	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAGAAGTTGTCAATGAC	984	False	NA	NA	False	NA	NA	NA	97130213	97170725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254
ES.31393.9	chr7	+	3161	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	100.677539412467	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCTAGTTTCTGGTC	988	False	NA	28	True	AATAAA	-16	NA	97130217	97190604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ES.31394.1	chr7	-	177	1	Intergenic	novelGene_25766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATACATGTACAT	NA	False	NA	NA	False	NA	NA	NA	97137150	97136973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97137000_97137200
ES.31395.1	chr7	-	5417	2	Antisense	novelGene_ENSMUSG00000025133.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAATAAAGATTGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	97183641	97174665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_97180017_97183575
ES.31396.1	chr7	+	3155	1	Antisense	novelGene_ENSMUSG00000035642.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTCAGACAAGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	97224836	97227991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_97224800_97228000
ES.31397.1	chr7	-	925	6	NIC	ENSMUSG00000035642.17	novel	709	6	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.2610207573802	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGTTGAGAGCATTA	NA	False	NA	NA	False	AATAAA	-21	NA	97228671	97199547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97227896_97227972_97228572
ES.31397.2	chr7	-	765	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	12	12	1	-3	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAAGTTGAGAGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	97228692	97199549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ES.31397.3	chr7	-	875	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	5	3	-5	-3	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAAGTTGAGAGCAT	NA	False	NA	NA	False	AATAAA	-19	NA	97228698	97199549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
ES.31397.4	chr7	-	395	3	FSM	ENSMUSG00000035642.17	ENSMUST00000144858.8	380	3	-44	29	1	-6	multi-exon	FALSE	canonical	2	4	junction_1	34	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTTGGCTGTCTTA	NA	False	NA	-30	True	AATAAA	-8	NA	97228692	97199777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97199949_97224794_97224899_97228572
ES.31397.5	chr7	-	511	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	38	240	15	-6	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTTGGCTGTCTTA	NA	False	NA	-30	True	AATAAA	-8	NA	97228666	97199777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ES.31397.6	chr7	-	217	1	Intergenic	novelGene_25768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGCAGTAAAACACATTT	8552	False	NA	NA	False	NA	NA	NA	97202708	97202491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97202500_97202700
ES.31397.7	chr7	-	8602	1	FSM	ENSMUSG00000035642.17	ENSMUST00000205430.2	2328	1	-191	-6083	-191	6083	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTAATCTCCTGCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	97227625	97219023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97219000_97227600
ES.31398.1	chr7	+	5483	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-343	5984	-335	186	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGAAATGAGTGGTCTT	NA	False	NA	NA	False	AATAAA	-36	NA	97228760	97336001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.10	chr7	+	4258	6	NNC	ENSMUSG00000035623.15	novel	5695	15	NA	NA	-4	10229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.415751300484	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGAATCTTCTATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	97229091	97298899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97295172_97296286_97296366
ES.31398.11	chr7	+	9553	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-12	1583	-4	-1583	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCATGGTCTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	97229091	97340402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.12	chr7	+	4771	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	34.9587693655763	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCATAGATGATGATTA	NA	False	NA	9	True	ATTAAA	-22	NA	97229094	97335629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318981_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.13	chr7	+	756	5	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	-8	33220	0	-7714	5prime_fragment	FALSE	canonical	3	100	junction_2	11.247221879202	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGGTTTTTTTTGTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	97229095	97302407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259
ES.31398.14	chr7	+	5273	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-8	5859	0	311	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGATGCTAAGCTG	NA	False	NA	NA	False	AATATA	-14	NA	97229095	97336126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.17	chr7	+	11140	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-8	-8	0	8	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTGTGTTTGAAAACATA	NA	False	NA	NA	False	AATAAA	-26	NA	97229095	97341993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.18	chr7	+	889	5	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	-6	33085	2	-7579	5prime_fragment	FALSE	canonical	3	100	junction_2	11.247221879202	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAACAAAGAAGCAA	NA	False	NA	NA	False	TATAAA	-9	NA	97229097	97302542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259
ES.31398.19	chr7	+	1828	8	NNC	ENSMUSG00000035623.15	novel	5695	15	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.3445536579357	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	NA	False	NA	2	True	ATTAAA	-15	NA	97229101	97335622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97310048_97331042_97331095_97334631
ES.31398.2	chr7	+	5313	17	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-324	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	44.5132968196021	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATAGATGATGATTAAC	NA	False	NA	11	True	ATTAAA	-24	NA	97228771	97335631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97229313_97266049_97266142_97280615_97280827_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.20	chr7	+	4767	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	35.3041388823212	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCATAGATGATGATT	NA	False	NA	8	True	ATTAAA	-21	NA	97229101	97335628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325364_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.21	chr7	+	5331	10	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-2	-3098	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.6075643554999	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97229101	97322289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97280615_97280827_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313764_97313974_97318975_97319081_97320009
ES.31398.22	chr7	+	4634	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-2	-142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.7288157588251	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCCTGAGCTCTCCTG	NA	False	NA	28	True	NA	NA	NA	97229101	97335485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302426_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328144_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.24	chr7	+	5858	15	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_5	36.5271076303166	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCATAGATGATGATTAA	NA	False	NA	10	True	ATTAAA	-23	NA	97229102	97335630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302424_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.27	chr7	+	3481	13	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	1	13511	1	-1511	5prime_fragment	FALSE	canonical	3	100	junction_2	11.7292961804572	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAGATTAAAATTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	97229104	97328474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141
ES.31398.28	chr7	+	4722	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	34.5928701709856	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	NA	False	NA	2	True	ATTAAA	-15	NA	97229104	97335622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329863_97330050_97330905_97331095_97334631
ES.31398.29	chr7	+	4796	17	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	44.643334818873	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATGGCATAGATGATG	NA	False	NA	5	True	ATTAAA	-18	NA	97229104	97335625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97312784_97312818_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.3	chr7	+	4955	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-331	6500	-323	-142	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCCTGAGCTCTCCTG	NA	False	NA	28	True	NA	NA	NA	97228772	97335485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.30	chr7	+	3646	8	ISM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	1	15736	1	-5496	5prime_fragment	FALSE	canonical	3	100	junction_2	14.5012314747995	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCACCATGTAGTCATT	NA	False	NA	NA	False	TTTAAA	-19	NA	97229104	97319891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975
ES.31398.34	chr7	+	4619	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	1	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.4461093304564	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTATATTTTTGACTT	NA	False	NA	7	True	NA	NA	NA	97229104	97335464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328124_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.35	chr7	+	3579	13	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	12	13402	2	-1402	5prime_fragment	FALSE	canonical	3	100	junction_2	11.7292961804572	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCCTCAGTAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	97229115	97328583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141
ES.31398.38	chr7	+	5661	15	FSM	ENSMUSG00000035623.15	ENSMUST00000156060.8	5695	15	34	0	24	0	multi-exon	FALSE	canonical	3	100	junction_2	14.6065752596674	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGGCATAGATGATGAT	NA	False	NA	7	True	ATTAAA	-20	NA	97229137	97335627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.39	chr7	+	2988	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	34	16572	24	26	5prime_fragment	FALSE	canonical	3	100	junction_2	12.6491106406735	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAGCAAATGCACTTGA	NA	False	NA	37	True	AAAAAG	-12	NA	97229137	97325413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362
ES.31398.40	chr7	+	4786	17	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	24	-157	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	44.5132968196021	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTGACTTTATATT	NA	False	NA	13	True	NA	NA	NA	97229137	97335470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97229313_97266049_97266142_97280615_97280827_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.41	chr7	+	7601	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	24	2683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	35.4338193757822	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTACTGGTAACTC	NA	False	NA	NA	False	AATAAA	-1	NA	97229137	97338498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334633
ES.31398.42	chr7	+	1667	1	Intergenic	novelGene_25769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97234661	97236328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97234700_97236300
ES.31398.44	chr7	+	4346	13	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-17930	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	50.5041252440498	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	8231	False	NA	2	True	ATTAAA	-15	NA	97288556	97335622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328352_97329825_97330050_97330905_97331095_97334609
ES.31398.46	chr7	+	3784	11	NNC	ENSMUSG00000035623.15	novel	2493	12	NA	NA	-1442	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.4645734701292	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCATAGATGATGATT	NA	False	NA	8	True	ATTAAA	-21	NA	97310316	97335628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325293_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.48	chr7	+	5927	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	81371	3987	-1284	2183	3prime_fragment	FALSE	canonical	3	124	junction_7	10.590561835899	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCTGATAAAATCAT	NA	False	NA	NA	False	AATAAA	-12	NA	97310474	97337998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.5	chr7	+	6609	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-330	4845	-322	1325	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAGCCAGCTGTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	97228773	97337140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.50	chr7	+	6287	11	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	81678	3320	-977	2850	3prime_fragment	FALSE	canonical	3	124	junction_7	10.590561835899	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATATATTAAGAAAAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	97310781	97338665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.51	chr7	+	4017	10	NIC	ENSMUSG00000035623.15	novel	2493	12	NA	NA	-276	-7	combination_of_known_junctions	FALSE	canonical	3	124	junction_7	9.98641051938725	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACATTCATGGCATAGA	NA	False	NA	0	True	ATTAAA	-13	NA	97311482	97335620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97330050_97330905_97331095_97334631
ES.31398.53	chr7	+	3153	2	NIC	ENSMUSG00000035623.15	novel	764	8	NA	NA	4736	-1521	intron_retention	FALSE	canonical	3	124	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGATTCATTTTTAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	97323789	97328464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97326620_97328141
ES.31398.54	chr7	+	8044	5	ISM	ENSMUSG00000035623.15	ENSMUST00000123731.8	2493	12	14791	-6169	7496	-1	3prime_fragment	FALSE	canonical	3	124	junction_1	14.6714007511212	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTTAGCATTGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	97326549	97341984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.55	chr7	+	4067	4	NNC	ENSMUSG00000035623.15	novel	5695	15	NA	NA	9461	1325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.8937077758724	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGAGCCAGCTGTGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	97328514	97337140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97329516_97329681_97330050_97330905_97331095_97334631
ES.31398.56	chr7	+	5129	1	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	106010	1743	16060	-1743	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTTGCTTGAGAGTC	2469	False	NA	NA	False	AAAAAG	-10	NA	97335113	97340242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97335100_97340200
ES.31398.6	chr7	+	5279	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-317	6162	-309	8	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCTGTTATAGCAGA	NA	False	NA	NA	False	AATAAA	-42	NA	97228786	97335823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.7	chr7	+	6296	15	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	100	junction_2	14.5758046650143	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	NA	False	NA	2	True	ATTAAA	-15	NA	97229088	97335622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31398.8	chr7	+	5156	9	ISM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	-15	19671	-7	-3073	5prime_fragment	FALSE	canonical	3	100	junction_2	13.8202749610853	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGATGTATATCCCATA	NA	False	NA	NA	False	NA	NA	NA	97229088	97322314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009
ES.31398.9	chr7	+	4692	16	NNC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.4003138718038	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTCATGGCATAGATG	NA	False	NA	2	True	ATTAAA	-15	NA	97229088	97335622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97229313_97266049_97266142_97285583_97285677_97288595_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ES.31399.1	chr7	+	1638	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	-71	-63	-71	63	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTATGTGTGTTTTGC	NA	False	NA	74	True	AGTAAA	-36	NA	97345769	97368149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ES.31399.12	chr7	+	3195	2	ISM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	143	10189	82	-4055	5prime_fragment	FALSE	canonical	3	1288	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATCTATCCCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	97345983	97357897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97346077_97354795
ES.31399.13	chr7	+	4365	5	ISM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	11830	2	-9331	-2	3prime_fragment	FALSE	canonical	3	1088	junction_2	63.9193828192982	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCGCTGTGATTTTGCT	NA	False	NA	9	True	AATAAA	-15	NA	97357670	97368084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ES.31399.14	chr7	+	917	3	NIC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	-5143	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	540.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCTGTGATTTTGCTC	NA	False	NA	10	True	AATAAA	-16	NA	97361858	97368085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97361942_97363113_97363288_97367425
ES.31399.2	chr7	+	1517	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	-71	58	-71	-58	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAATGATATTTTGTC	NA	False	NA	23	True	AATAAA	-26	NA	97345769	97368028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ES.31399.4	chr7	+	990	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	28	486	28	-486	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGTATTTGTAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	97345868	97367600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ES.31399.9	chr7	+	1451	7	NNC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	460.094796995383	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATCGCTGTGATTTTG	NA	False	NA	7	True	AATAAA	-13	NA	97345883	97368082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363119_97363288_97365657_97365747_97367425
ES.314.1	chr1	-	3883	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	-20	0	-20	0	multi-exon	FALSE	canonical	3	395	junction_2	27.5	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTGTTTCAAGATTA	6252	False	NA	-3	True	NA	NA	NA	37469204	37456164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37459709_37467422_37467507_37468949
ES.314.11	chr1	-	582	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-32	-3242	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	192	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGACTCTTCGATCAG	6343	False	NA	-9	True	AATGAA	-13	NA	37469113	37459406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37459741_37467422_37467507_37468949
ES.314.2	chr1	-	3700	2	NIC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTTCTGTTTCAAGAT	6349	False	NA	-5	True	NA	NA	NA	37469107	37456166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37459709_37468949
ES.314.3	chr1	-	2936	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	9776	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	NA	False	NA	-7	True	NA	NA	NA	37459305	37456168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37456207_37456307_37456575_37456674
ES.314.4	chr1	-	3829	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	197.5	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6354	False	NA	-7	True	NA	NA	NA	37469102	37456168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37459761_37467422_37467507_37468949
ES.314.5	chr1	-	3705	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	159	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	225	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6534	False	NA	-7	True	NA	NA	NA	37468922	37456168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37459709_37467422_37467507_37468841
ES.314.6	chr1	-	3768	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	225	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTGTTCTGTTTCAAG	6348	False	NA	-7	True	NA	NA	NA	37469108	37456168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37459709_37467422_37467503_37468960
ES.314.7	chr1	-	3841	3	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	46	-8	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	192	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATCTTTGTTCTGTTT	6318	False	NA	-11	True	NA	NA	NA	37469138	37456172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37459741_37467422_37467507_37468949
ES.314.8	chr1	-	2603	4	NNC	ENSMUSG00000026112.8	novel	3863	3	NA	NA	-12	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	200.430093105357	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACATCTTTGTTCTGT	6363	False	NA	-13	True	NA	NA	NA	37469093	37456174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37457982_37459140_37459709_37467422_37467507_37468949
ES.314.9	chr1	-	631	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	70	3162	-33	-3162	multi-exon	FALSE	canonical	3	395	junction_2	27.5	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTTTTTCTGTTTCTT	6342	False	NA	0	True	NA	NA	NA	37469114	37459326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37459709_37467422_37467507_37468949
ES.3140.1	chr10	-	557	1	Antisense	novelGene_ENSMUSG00000049764.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACACTGAAAA	NA	False	NA	NA	False	AAAAAG	-13	NA	75878296	75877739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_75877700_75878300
ES.31400.1	chr7	-	10031	2	NNC	ENSMUSG00000086433.2	novel	324	3	NA	NA	-2673	-39324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTTAAGGACTTATAAATA	NA	False	NA	NA	False	NA	NA	NA	97296992	97286879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97296287_97296368
ES.31400.2	chr7	-	5507	2	NNC	ENSMUSG00000086433.2	novel	324	3	NA	NA	-2454	-43629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTAAAAACAACCTGCTAT	NA	False	NA	NA	False	CATAAA	-1	NA	97296773	97291184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97296287_97296368
ES.31400.3	chr7	-	3481	2	NNC	ENSMUSG00000086433.2	novel	324	3	NA	NA	-2655	-45856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACATGTTTGGTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	97296974	97293411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97296287_97296368
ES.31401.1	chr7	-	2140	3	NNC	ENSMUSG00000086993.2	novel	706	2	NA	NA	-114	13036	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGAATTGCAGTGACC	NA	False	NA	NA	False	AATAAA	-12	NA	97346149	97329593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97331143_97345318_97345675_97345914
ES.31401.2	chr7	-	4306	2	FSM	ENSMUSG00000086993.2	ENSMUST00000147690.2	3091	2	21	-1236	21	1236	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATGTTCTGATTAGGT	NA	False	NA	NA	False	AATAAA	-30	NA	97345807	97341393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97345675_97345782
ES.31402.1	chr7	-	144	1	Intergenic	novelGene_25770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	97361597	97361453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97361500_97361600
ES.31403.1	chr7	-	3886	1	Antisense	novelGene_ENSMUSG00000025439.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAACCAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	97369947	97366061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_97366100_97369900
ES.31404.1	chr7	+	3582	3	Intergenic	novelGene_25771	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAACTCAAAGTTAATT	4914	False	NA	NA	False	NA	NA	NA	97405087	97409047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97405180_97405518_97408462_97408500
ES.31405.1	chr7	+	3360	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-67	-499	-67	1	multi-exon	TRUE	canonical	3	118	junction_1	35.6279671159656	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGTGTGTCTTTTTTCC	NA	False	NA	20	True	AATAAA	-21	NA	97437680	97561589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.11	chr7	+	2486	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-25	333	-25	268	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAGTTGAAATTGCTTT	NA	False	NA	89	True	TATAAA	-29	NA	97437722	97560757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.12	chr7	+	5300	14	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	0	644	0	-43	intron_retention	FALSE	canonical	3	118	junction_1	36.6110210716025	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCCGACCCCTCATG	NA	False	NA	2	True	AATAAA	-11	NA	97437747	97560446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014
ES.31405.13	chr7	+	2130	15	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	2	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	73.16099105565	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCCGACCCCTCATG	NA	False	NA	2	True	AATAAA	-11	NA	97437749	97560446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547746_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.14	chr7	+	3352	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	79.4009795629472	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGAAGTGTGTCTTT	NA	False	NA	15	True	AATAAA	-16	NA	97437749	97561584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97539847_97539914_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.15	chr7	+	6655	14	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	6	-43	intron_retention	FALSE	canonical	3	118	junction_1	35.3117979848531	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTCCGACCCCTCATG	NA	False	NA	2	True	AATAAA	-11	NA	97437753	97560446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.16	chr7	+	3981	4	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	11	3175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.3390409285446	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTACTCTTTGCATTC	NA	False	NA	NA	False	NA	NA	NA	97437758	97518508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97503639_97503857_97514678_97514780_97515268
ES.31405.18	chr7	+	1974	15	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	250	-281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	66.1569330903297	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGATCTGTCACTGAG	NA	False	NA	NA	False	AATAAA	-12	NA	97437997	97560208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97559990
ES.31405.22	chr7	+	1963	16	NNC	ENSMUSG00000030774.14	novel	952	7	NA	NA	16296	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1467588863038	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTCATGTCCTCTTCT	774	False	NA	11	True	AATAAA	-20	NA	97454043	97560455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97454078_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.23	chr7	+	2885	15	NNC	ENSMUSG00000030774.14	novel	952	7	NA	NA	16296	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.997407779911	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACAGGAAGTGTGTC	774	False	NA	12	True	AATAAA	-13	NA	97454043	97561581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97454078_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.24	chr7	+	207	1	Intergenic	novelGene_25773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCGAACTTTAGTGCTG	NA	False	NA	NA	False	AAGAAA	-5	NA	97477658	97477865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97477700_97477900
ES.31405.25	chr7	+	2157	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	-10	918	-10	181	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATCTCAGCCATCC	NA	False	NA	2	True	AATAAA	-13	NA	97492131	97560670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.26	chr7	+	3070	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	-5	0	-5	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97492136	97561588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.28	chr7	+	1789	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	133	1143	133	-44	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTCCGACCCCTCAT	NA	False	NA	1	True	AATAAA	-10	NA	97492274	97560445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.29	chr7	+	1482	11	ISM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	28634	919	-22346	180	3prime_fragment	FALSE	canonical	3	190	junction_1	24.219000805153	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAATCTCAGCCATC	NA	False	NA	1	True	AATAAA	-12	NA	97520775	97560669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.3	chr7	+	3549	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437694	97561588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.4	chr7	+	2207	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	-43	630	-43	-29	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTCCTCTTCTCCTTT	NA	False	NA	16	True	AATAAA	-25	NA	97437704	97560460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.5	chr7	+	2619	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-41	181	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATCTCAGCCATCC	NA	False	NA	2	True	AATAAA	-13	NA	97437706	97560670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.6	chr7	+	3105	14	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	-38	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	64.0924812583048	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTCTACAGGAAGTG	NA	False	NA	8	True	AATAAA	-9	NA	97437709	97561577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_97438182_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ES.31405.8	chr7	+	945	2	FSM	ENSMUSG00000030774.14	ENSMUST00000205757.2	911	2	-33	-1	-33	1	multi-exon	FALSE	canonical	3	118	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGTATCTATTTC	NA	False	NA	NA	False	AATAAA	-30	NA	97437714	97504120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_97438182_97503642
ES.31406.1	chr7	-	3515	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	222	0	-129	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTGTATATGTGAAT	NA	False	NA	NA	False	AAGAAA	-5	NA	97387274	97373212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97375912_97378177_97378295_97386575
ES.31406.2	chr7	-	1997	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	255	1485	-96	888	multi-exon	FALSE	canonical	3	30	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATTTTCTCTTTTTCTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	97387241	97374697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97375912_97378177_97378295_97386575
ES.31406.3	chr7	-	691	3	NNC	ENSMUSG00000042797.10	novel	3737	3	NA	NA	-62066	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTAGTAACTGTGAT	NA	False	NA	-1	True	ATTAAA	-43	NA	97449562	97375585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97375912_97378177_97378295_97449314
ES.31406.4	chr7	-	1149	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	215	2373	-136	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTAGTAACTGTGAT	NA	False	NA	-1	True	ATTAAA	-43	NA	97387281	97375585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97375912_97378177_97378295_97386575
ES.31407.1	chr7	-	159	1	Intergenic	novelGene_25772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	97459661	97459502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97459500_97459700
ES.31408.1	chr7	-	189	1	Intergenic	novelGene_25774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGACATCCTAT	NA	False	NA	NA	False	NA	NA	NA	97481024	97480835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97480800_97481000
ES.31409.1	chr7	-	4897	1	Antisense	novelGene_ENSMUSG00000030774.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGTGTTGTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	97524573	97519676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_97519700_97524600
ES.31409.2	chr7	-	4639	1	Antisense	novelGene_ENSMUSG00000030774.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	AAGAAA	-33	NA	97524575	97519936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_97519900_97524600
ES.3141.1	chr10	+	175	1	Intergenic	novelGene_2471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	75885690	75885865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75885700_75885900
ES.31410.1	chr7	-	1614	2	Antisense	novelGene_ENSMUSG00000035582.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGGTTTCATTGCTTCT	6726	False	NA	NA	False	NA	NA	NA	97588744	97585140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_97586577_97588566
ES.31411.1	chr7	-	2331	5	ISM	ENSMUSG00000030761.17	ENSMUST00000156992.8	2853	18	14895	-1216	10720	1213	3prime_fragment	FALSE	canonical	0	0	junction_4	1.11803398874989	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTGTCTCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	97703689	97699053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97700924_97701401_97701522_97702363_97702448_97703012_97703130_97703549
ES.31411.2	chr7	-	5408	34	ISM	ENSMUSG00000030761.17	ENSMUST00000107128.8	7506	49	34012	1	-793	-1	3prime_fragment	TRUE	canonical	0	0	junction_4	0.834296963511285	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGTCTCATGGTGATC	3550	False	NA	NA	False	CATAAA	-14	NA	97734719	97700267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97700924_97701401_97701522_97702363_97702448_97703012_97703130_97703549_97703736_97703814_97703922_97704080_97704169_97704997_97705112_97705947_97706054_97706517_97706674_97711781_97711936_97712794_97712953_97713319_97713445_97713940_97714132_97714818_97715103_97715547_97715675_97716336_97716455_97718578_97718750_97720108_97720337_97721039_97721214_97721578_97721699_97722326_97722454_97724213_97724342_97725284_97725375_97725798_97725976_97726196_97726401_97726835_97727046_97728002_97728111_97728418_97728638_97729111_97729197_97730284_97730380_97732331_97732425_97732714_97732874_97734590
ES.31411.3	chr7	-	4731	29	ISM	ENSMUSG00000030761.17	ENSMUST00000084979.11	6849	48	29817	-337	5288	-1	3prime_fragment	FALSE	canonical	0	0	junction_4	0.845154254728517	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGGTCTCATGGTG	9631	False	NA	NA	False	CATAAA	-11	NA	97728638	97700270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97700924_97701401_97701522_97702363_97702448_97703012_97703130_97703549_97703736_97703814_97703922_97704080_97704169_97704997_97705112_97705947_97706054_97706517_97706674_97711781_97711936_97712794_97712953_97713319_97713445_97713940_97714132_97714818_97714989_97715547_97715675_97716336_97716455_97718578_97718750_97720108_97720337_97721039_97721214_97721578_97721699_97722326_97722454_97724213_97724342_97725284_97725375_97725798_97725976_97726196_97726401_97726835_97727046_97728002_97728111_97728418
ES.31412.1	chr7	+	4138	1	Antisense	novelGene_ENSMUSG00000035547.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGGTGAGAGTTTTTA	NA	False	NA	NA	False	AATAAA	-10	NA	97811688	97815826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_97811700_97815800
ES.31413.1	chr7	-	4276	12	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	89	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	48.6654967971395	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGTTTCATTTTTC	NA	False	NA	0	True	AATAAA	-22	NA	97827392	97770766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97811122_97811318_97827250
ES.31413.11	chr7	-	4317	13	FSM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	12	-2097	12	-5	multi-exon	FALSE	canonical	2	4	junction_12	45.8223471681668	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	-4	True	AATAAA	-18	NA	97811537	97770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97811482
ES.31413.12	chr7	-	4622	15	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	60	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	67.5448830370576	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	97827421	97770771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97825967_97826102_97826769_97826826_97827250
ES.31413.13	chr7	-	4480	13	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	108	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	46.6100847456857	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	97814540	97770771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97814321
ES.31413.15	chr7	-	4521	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	59.1501949458341	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGATCTGTCTGTTTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	97827454	97770771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97826769_97826826_97827250
ES.31413.16	chr7	-	5110	12	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	33	-7	intron_retention	FALSE	canonical	0	0	junction_8	48.7894786110745	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97827448	97770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784962_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.19	chr7	-	4973	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	78	-7	intron_retention	FALSE	canonical	1	4	junction_6	60.0570908941373	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97827403	97770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778182_97778450_97778647_97780397_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.2	chr7	-	4304	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	502	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.8729814380192	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTCTGTTTCATTTTT	NA	False	NA	-1	True	AATAAA	-21	NA	97813667	97770767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813628
ES.31413.20	chr7	-	3763	10	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	77	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.7148392031223	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97827404	97770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778618_97785123_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.21	chr7	-	4364	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	693	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.5219314515824	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97826788	97770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778179_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782168_97784966_97785176_97801018_97801151_97811122_97811318_97826769
ES.31413.22	chr7	-	4356	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	390	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	45.2980101353495	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	97813779	97770772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813683
ES.31413.24	chr7	-	2974	5	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	37	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.6068598590409	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827444	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773125_97785073_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.25	chr7	-	4828	12	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	69	-8	intron_retention	FALSE	canonical	3	136	junction_8	15.3966831246106	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827412	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.26	chr7	-	4337	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	60	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.6317577765768	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827421	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811215_97811318_97827250
ES.31413.27	chr7	-	4742	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	105	-8	intron_retention	FALSE	canonical	0	0	junction_12	60.3717649236794	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827376	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97826769_97826826_97827250
ES.31413.28	chr7	-	5175	11	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	66	-8	intron_retention	FALSE	canonical	3	136	junction_7	15.0319659392908	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827415	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.29	chr7	-	5153	12	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	60	-8	intron_retention	FALSE	canonical	1	5	junction_4	46.6715267048195	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97827421	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775650_97777679_97777803_97778028_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.3	chr7	-	4484	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	11	3	11	-3	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTGTCTGTTTCATTTT	NA	False	NA	-2	True	AATAAA	-20	NA	97827470	97770768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.30	chr7	-	4343	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	1728	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	46.3473450036665	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGATCTGTCTGTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	97825753	97770773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97825669
ES.31413.31	chr7	-	3727	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	61	710	61	-710	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCACACTGGGGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	97827420	97771475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.32	chr7	-	3560	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	60	878	60	-878	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTCCTTTTGGAACTGT	NA	False	NA	NA	False	NA	NA	NA	97827421	97771643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.33	chr7	-	2913	11	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	10399	-943	10267	943	3prime_fragment	FALSE	canonical	3	136	junction_9	15.7762479696536	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTCCTCTGCAGGCT	NA	False	NA	NA	False	TTTAAA	-32	NA	97801150	97771924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018
ES.31413.34	chr7	-	2936	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	61	1501	61	601	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCTGCTTGTGGTGTTG	NA	False	NA	NA	False	NA	NA	NA	97827420	97772266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.35	chr7	-	2643	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	144	1711	144	391	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGGAGACATCTGCTCA	NA	False	NA	NA	False	TTTAAA	-29	NA	97827337	97772476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.36	chr7	-	2569	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	59	1870	59	232	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTCCTCAATGCCGTA	NA	False	NA	0	True	NA	NA	NA	97827422	97772635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.37	chr7	-	2665	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	112	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.8982675225661	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCCTCAATGCCGT	NA	False	NA	-1	True	NA	NA	NA	97827369	97772636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778179_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.38	chr7	-	2788	13	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	-145	226	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	46.8729814380192	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCCACCTCCTCAAT	NA	False	NA	-6	True	NA	NA	NA	97814314	97772641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813917
ES.31413.39	chr7	-	2445	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	33	2020	33	82	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGAGTGCCAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	97827448	97772785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.4	chr7	-	4351	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	78	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	45.6735852423355	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTGTCTGTTTCATTT	NA	False	NA	-3	True	AATAAA	-19	NA	97827403	97770769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782168_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.40	chr7	-	2471	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	33	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.8982675225661	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCGCTGCTGTTAAGG	NA	False	NA	NA	False	NA	NA	NA	97827448	97772843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778113_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.41	chr7	-	2277	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	394	20	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	45.2980101353495	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTGGGCGCTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	97813775	97772847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813683
ES.31413.42	chr7	-	2772	12	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	33	2	intron_retention	FALSE	canonical	3	136	junction_8	15.3966831246106	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGCAGTTCTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	97827448	97772865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.43	chr7	-	3688	11	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	50	-32	intron_retention	FALSE	canonical	0	0	junction_7	50.9709721312042	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGTCTTGTGGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	97827431	97772899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97782233_97784962_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.44	chr7	-	2478	11	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	94	-38	intron_retention	FALSE	canonical	0	0	junction_7	50.9709721312042	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATTCCCGTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	97827387	97772905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97781077_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.45	chr7	-	4559	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	120	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	46.4701218227607	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATTCCCGTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	97827361	97772905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97784554_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.46	chr7	-	2126	12	ISM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	156	115	24	-115	3prime_fragment	FALSE	canonical	3	136	junction_9	15.0651477817495	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTCTTCCACTGACCC	NA	False	NA	NA	False	NA	NA	NA	97811393	97772982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122
ES.31413.47	chr7	-	2939	5	Fusion	ENSMUSG00000035547.15_ENSMUSG00000074006.4	novel	668	3	NA	NA	76	3	multi-exon	FALSE	canonical	0	0	junction_4	70.3078053988318	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTGTGGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	97827405	97792562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_97794964_97801018_97801151_97811122_97811318_97826769_97826826_97827250
ES.31413.48	chr7	-	160	1	Intergenic	novelGene_25775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	97818392	97818232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97818200_97818400
ES.31413.5	chr7	-	4660	13	NIC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	-145	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	46.8729814380192	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTGTCTGTTTCATTT	NA	False	NA	-3	True	AATAAA	-19	NA	97814314	97770769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97813917
ES.31413.6	chr7	-	4849	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	66	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	45.5320400011538	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	-4	True	AATAAA	-18	NA	97827415	97770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.7	chr7	-	4594	14	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	58.8982675225661	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	-4	True	AATAAA	-18	NA	97827432	97770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778028_97778179_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31413.9	chr7	-	4483	13	NNC	ENSMUSG00000035547.15	novel	4498	13	NA	NA	64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.8605348051238	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTGTCTGTTTCATT	NA	False	NA	-4	True	AATAAA	-18	NA	97827417	97770770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778701_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ES.31414.1	chr7	+	3371	4	Antisense	novelGene_ENSMUSG00000030760.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGTGCTTTCTGCCCT	581	False	NA	NA	False	AATAAA	-15	NA	97831573	97861433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_97831686_97847721_97847826_97857003_97857086_97858360
ES.31414.2	chr7	+	185	1	Intergenic	novelGene_25777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTATTGAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	97854082	97854267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97854100_97854300
ES.31415.1	chr7	-	158	1	Intergenic	novelGene_25776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	97837998	97837840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97837800_97838000
ES.31416.1	chr7	+	2656	2	Antisense	novelGene_ENSMUSG00000030760.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCAATACAAGGAC	NA	False	NA	NA	False	NA	NA	NA	97885197	97888076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_97885354_97885576
ES.31417.1	chr7	+	177	1	Intergenic	novelGene_25779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTCACATAATTTA	NA	False	NA	NA	False	NA	NA	NA	97930226	97930403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97930200_97930400
ES.31418.1	chr7	+	178	1	Intergenic	novelGene_25780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	97943871	97944049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97943900_97944000
ES.31419.1	chr7	+	3398	1	Intergenic	novelGene_25781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGACTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	97948225	97951623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_97948200_97951600
ES.3142.1	chr10	+	179	1	Intergenic	novelGene_2472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGTCAAC	6679	False	NA	NA	False	NA	NA	NA	75900126	75900305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_75900100_75900300
ES.31420.1	chr7	-	3923	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	-2	7419	-2	-150	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTTTTGGAAGAAAATCT	NA	False	NA	1	True	AATAAA	-20	NA	97958747	97863014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.10	chr7	-	3587	11	NNC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	9	-452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.6951217805091	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTGATATTGTTGCT	NA	False	NA	NA	False	AGTAAA	-5	NA	97958704	97863316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97866107_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.11	chr7	-	3174	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	3	8163	3	-894	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTAAAAATAATATGATT	NA	False	NA	NA	False	TTTAAA	-7	NA	97958742	97863758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.12	chr7	-	2895	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	62	8383	30	-1114	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAGTGGTTTAGCATT	NA	False	NA	NA	False	GATAAA	-39	NA	97958683	97863978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.13	chr7	-	2607	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	42	8691	10	1363	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTCTTCCTTTGGGA	NA	False	NA	NA	False	CATAAA	-14	NA	97958703	97864286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.14	chr7	-	1351	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	3	9986	3	68	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACATTCTTATATTAAT	NA	False	NA	20	True	NA	NA	NA	97958742	97865581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.15	chr7	-	1121	9	NIC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	10	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	75.5900745799341	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACCATATCCAGATGG	NA	False	NA	-36	True	ATTAAA	-28	NA	97958703	97865637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97910793_97910847_97915343_97915455_97958554
ES.31420.16	chr7	-	1165	10	NIC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	72.773621594641	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTACTGGCAAAATAC	NA	False	NA	-49	True	ATTAAA	-15	NA	97958707	97865650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.17	chr7	-	2868	10	NIC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	12	-1	intron_retention	FALSE	canonical	3	186	junction_1	21.8654697052704	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTACTGGCAAAATAC	NA	False	NA	-49	True	ATTAAA	-15	NA	97958701	97865650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.18	chr7	-	990	10	ISM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	43336	10114	-39314	-60	3prime_fragment	FALSE	canonical	3	186	junction_1	21.7817456702727	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGTTGCATGTTAATT	NA	False	NA	-108	True	NA	NA	NA	97915409	97865709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343
ES.31420.19	chr7	-	1009	7	ISM	ENSMUSG00000030760.15	ENSMUST00000151258.8	1440	12	-7	27079	3	8368	5prime_fragment	FALSE	canonical	3	223	junction_2	10.2537256101813	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATATATGAGACATCT	NA	False	NA	NA	False	AATAAA	-12	NA	97958742	97892728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.2	chr7	-	3832	10	NIC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	2	-152	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	71.6670973285941	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGTTTTGGAAGAAAAT	NA	False	NA	-1	True	AATAAA	-18	NA	97958711	97863016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97910793_97910847_97915343_97915455_97958554
ES.31420.20	chr7	-	881	1	Intergenic	novelGene_25778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97913959	97913078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_97913100_97914000
ES.31420.3	chr7	-	4710	2	ISM	ENSMUSG00000030760.15	ENSMUST00000151258.8	1440	12	89843	-2632	7203	-153	3prime_fragment	FALSE	canonical	3	186	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTTTTGGAAGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	97868892	97863017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_97866098_97867262
ES.31420.4	chr7	-	3956	11	NNC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	-3	-153	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_7	66.6438294217852	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTTTTGGAAGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	97958748	97863017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908576_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.5	chr7	-	3980	12	NNC	ENSMUSG00000030760.15	novel	1440	12	NA	NA	3	-154	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	85.2645857714494	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTGGTTTTGGAAGAAA	NA	False	NA	-3	True	AATAAA	-16	NA	97958742	97863018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97879656_97879723_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31420.6	chr7	-	3818	11	NNC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	56	-156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	68.9159633176523	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTGGTTTTGGAAGA	NA	False	NA	-5	True	AATAAA	-14	NA	97958657	97863020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915352_97915455_97958554
ES.31420.8	chr7	-	3718	10	NNC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	-39359	-156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.9672681564976	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTGGTTTTGGAAGA	NA	False	NA	-5	True	AATAAA	-14	NA	97915454	97863020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_97866098_97867268_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343
ES.31420.9	chr7	-	3836	10	NIC	ENSMUSG00000030760.15	novel	11340	11	NA	NA	10	-157	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	70.2487643228611	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAACTGGTTTTGGAAG	NA	False	NA	-6	True	AATAAA	-13	NA	97958703	97863021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ES.31421.1	chr7	-	2619	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-111	-198	-71	-2	multi-exon	FALSE	canonical	3	40	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGCATTTGCTGACAAA	NA	False	NA	0	True	AATAAA	-28	NA	98010606	97999876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98002338_98010448
ES.31421.2	chr7	-	2651	2	NNC	ENSMUSG00000049580.13	novel	2597	2	NA	NA	319	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAGCATTTGCTGACAA	NA	False	NA	-1	True	AATAAA	-27	NA	98010176	97999877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98002338_98009985
ES.31421.3	chr7	-	2650	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	-35	5	5	-5	multi-exon	FALSE	canonical	2	4	junction_2	1.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTAGCATTTGCTGAC	NA	False	NA	-3	True	AATAAA	-25	NA	98010530	97999879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98002338_98008564_98008675_98010448
ES.31421.4	chr7	-	3138	2	NNC	ENSMUSG00000049580.13	novel	2597	2	NA	NA	6211	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAACTAGCATTTGCTG	NA	False	NA	-5	True	AATAAA	-23	NA	98003075	97999881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98002496_98002551
ES.31421.5	chr7	-	2640	2	NNC	ENSMUSG00000049580.13	novel	2597	2	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAACTAGCATTTGCTG	NA	False	NA	-5	True	AATAAA	-23	NA	98010458	97999881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98002338_98010274
ES.31421.6	chr7	-	2913	2	NNC	ENSMUSG00000049580.13	novel	2597	2	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAACTAGCATTTGCTG	NA	False	NA	-5	True	AATAAA	-23	NA	98010458	97999881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98002338_98010001
ES.31421.7	chr7	-	2422	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	-112	0	-72	0	multi-exon	FALSE	canonical	3	40	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGACTCTGTTCTGGGT	NA	False	NA	NA	False	GATAAA	-18	NA	98010607	98000074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98002338_98010448
ES.31422.1	chr7	-	169	1	Intergenic	novelGene_25782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCAACTAGGATC	NA	False	NA	NA	False	NA	NA	NA	98166260	98166091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98166100_98166300
ES.31423.1	chr7	+	1246	1	Intergenic	novelGene_25783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTTTAAGAACTTAGGA	NA	False	NA	NA	False	NA	NA	NA	98213250	98214496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98213200_98214500
ES.31424.1	chr7	-	216	1	Intergenic	novelGene_25784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCTCATGCCCTC	6598	False	NA	NA	False	CATAAA	-9	NA	98229921	98229705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98229700_98229900
ES.31425.1	chr7	-	8448	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	208	-963	-7	963	multi-exon	TRUE	canonical	3	39	junction_14	16.3198636678896	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGTGCAGCATTGCTT	3714	False	NA	NA	False	ATTAAA	-19	NA	98305778	98235380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.10	chr7	-	6203	22	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	20	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	25.4713391019447	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAATAAGTTATGTTCCA	3482	False	NA	NA	False	AATAAA	-41	NA	98306010	98238122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98299867_98299980_98303950_98304060_98305680
ES.31425.100	chr7	-	4151	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	19.8412383808176	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3482	False	NA	NA	False	NA	NA	NA	98306010	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.101	chr7	-	3665	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	14	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	23.4837044564949	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3722	False	NA	NA	False	NA	NA	NA	98305770	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.102	chr7	-	3873	19	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-9	14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	28.4706910157372	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3712	False	NA	NA	False	NA	NA	NA	98305780	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289088_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.103	chr7	-	4711	19	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	779	14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	28.117258879798	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	4518	False	NA	NA	False	NA	NA	NA	98304974	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98304156
ES.31425.105	chr7	-	4406	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-9	10	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	19.5153144991312	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAAGCACTTTGC	3493	False	NA	NA	False	NA	NA	NA	98305999	98239796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.106	chr7	-	3989	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-15	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3690	False	NA	NA	False	NA	NA	NA	98305802	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.107	chr7	-	3599	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-1	-15	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	26.6254890408921	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3720	False	NA	NA	False	NA	NA	NA	98305772	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.108	chr7	-	3423	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	14	-15	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	28.8649197773006	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3704	False	NA	NA	False	NA	NA	NA	98305788	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.11	chr7	-	5720	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	185	1788	1	11	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACAAACTTGAATAAGT	3691	False	NA	NA	False	AATAAA	-32	NA	98305801	98238131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.111	chr7	-	3691	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-12	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	21.4965998759891	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3709	False	NA	NA	False	NA	NA	NA	98305783	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.112	chr7	-	3957	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-5	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	28.216660518138	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3729	False	NA	NA	False	NA	NA	NA	98305763	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.113	chr7	-	4043	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	2	-15	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	23.5441130543406	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	3736	False	NA	NA	False	NA	NA	NA	98305756	98239821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.115	chr7	-	4228	18	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-86	-16	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	26.779892265612	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	3416	False	NA	NA	False	NA	NA	NA	98306076	98239822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98297011_98297112_98303950_98304060_98305680
ES.31425.117	chr7	-	3573	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-12	-16	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	25.1095378071539	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	3709	False	NA	NA	False	NA	NA	NA	98305783	98239822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.118	chr7	-	3700	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-16	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	25.7296296287072	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	3714	False	NA	NA	False	NA	NA	NA	98305778	98239822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.119	chr7	-	2848	13	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-14715	-16	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	23.3862495211752	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	4635	False	NA	NA	False	NA	NA	NA	98279460	98239822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98242874_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337
ES.31425.12	chr7	-	6041	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-78	7	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	23.5441130543406	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGAACAAACTTGAAT	3424	False	NA	NA	False	AATAAA	-28	NA	98306068	98238135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.120	chr7	-	4965	20	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	22	junction_3	20.2574838262191	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAGAAAAAAAAAAAA	3738	False	NA	NA	False	NA	NA	NA	98305754	98239822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.121	chr7	-	5579	1	FSM	ENSMUSG00000035401.10	ENSMUST00000205331.2	2965	1	-1960	-654	-1179	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98245402	98239823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98239800_98245400
ES.31425.122	chr7	-	3391	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-18	-18	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	26.9410879925481	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTAAAAAAGAAAAAAAAAA	3484	False	NA	NA	False	NA	NA	NA	98306008	98239824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.123	chr7	-	4142	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-5	-18	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	23.4273344621192	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTAAAAAAGAAAAAAAAAA	3729	False	NA	NA	False	NA	NA	NA	98305763	98239824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.13	chr7	-	6002	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	22.5075542873943	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGGAAATAAGAACAAACT	3728	False	NA	NA	False	AATAAA	-23	NA	98305764	98238140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.14	chr7	-	3448	7	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	2222	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	30.9300285590988	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAGGAAATAAGAACAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	98259980	98238141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873
ES.31425.15	chr7	-	5219	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.2454017531745	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATCAGGAAATAAGAACAAA	3701	False	NA	NA	False	AATAAA	-21	NA	98305791	98238142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.16	chr7	-	5635	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGATCAGGAAATAAGAAC	3720	False	NA	NA	False	AATAAA	-18	NA	98305772	98238145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.17	chr7	-	5914	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.478198699858	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGATCAGGAAATAAGAA	3482	False	NA	NA	False	AATAAA	-17	NA	98306010	98238146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.18	chr7	-	3779	8	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	2226	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	27.6921855919164	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGATCAGGAAATAAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	98259976	98238146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873
ES.31425.19	chr7	-	5243	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	25.1095378071539	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	3714	False	NA	NA	False	AATAAA	-16	NA	98305778	98238147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.2	chr7	-	7662	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	7	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	23.4273344621192	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGACTCCTCTTATT	3697	False	NA	NA	False	AATAAA	-33	NA	98305795	98236336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.20	chr7	-	5857	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	19.5153144991312	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	3691	False	NA	NA	False	AATAAA	-16	NA	98305801	98238147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.21	chr7	-	5257	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	36	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	23.4837044564949	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	3775	False	NA	NA	False	AATAAA	-16	NA	98305717	98238147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.22	chr7	-	4577	13	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	7700	-5	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	21.8974884404582	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	4435	False	NA	NA	False	AATAAA	-16	NA	98286703	98238147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467
ES.31425.23	chr7	-	5665	18	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.601505619615	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGATCAGGAAATAAGA	3709	False	NA	NA	False	AATAAA	-16	NA	98305783	98238147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246388_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.24	chr7	-	5796	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	14	-11	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACACATGGATCAGGAA	3704	False	NA	NA	False	AATAAA	-10	NA	98305788	98238153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.25	chr7	-	5241	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-78	-528	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	23.0236827071154	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTGGTGCTGAAGTAC	3424	False	NA	39	True	NA	NA	NA	98306068	98238670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.26	chr7	-	9867	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-15	-565	intron_retention	FALSE	canonical	3	39	junction_14	15.0289225199522	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3706	False	NA	2	True	TATAAA	-23	NA	98305786	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.27	chr7	-	5395	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-20	-565	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	19.749113904173	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3482	False	NA	2	True	TATAAA	-23	NA	98306010	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.28	chr7	-	4819	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	5	-565	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	21.4965998759891	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3695	False	NA	2	True	TATAAA	-23	NA	98305797	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.29	chr7	-	4897	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-6	-565	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	25.6924854038759	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3728	False	NA	2	True	TATAAA	-23	NA	98305764	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.3	chr7	-	6765	17	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-13	5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	26.8507885126303	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAAGACTCCTCTTA	3708	False	NA	NA	False	AATAAA	-31	NA	98305784	98236338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98297011_98297112_98303950_98304060_98305680
ES.31425.30	chr7	-	5201	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-11	-565	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	25.2187925959987	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3679	False	NA	2	True	TATAAA	-23	NA	98305813	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.31	chr7	-	5245	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	11	-565	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3701	False	NA	2	True	TATAAA	-23	NA	98305791	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.32	chr7	-	4601	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-9	-565	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.1095103931993	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3712	False	NA	2	True	TATAAA	-23	NA	98305780	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.33	chr7	-	5377	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-86	-565	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3416	False	NA	2	True	TATAAA	-23	NA	98306076	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.34	chr7	-	5585	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-77	-565	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	20.3478067859224	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3425	False	NA	2	True	TATAAA	-23	NA	98306067	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.35	chr7	-	5467	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	6	-565	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	22.5075542873943	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3696	False	NA	2	True	TATAAA	-23	NA	98305796	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.36	chr7	-	4665	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-565	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	20.2039752841848	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3690	False	NA	2	True	TATAAA	-23	NA	98305802	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.37	chr7	-	5028	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-22	-565	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.3829674064208	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3480	False	NA	2	True	TATAAA	-23	NA	98306012	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.38	chr7	-	4803	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-565	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	27.7563546762448	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3714	False	NA	2	True	TATAAA	-23	NA	98305778	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.39	chr7	-	5998	18	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	1	-565	intron_retention	FALSE	canonical	3	6	junction_5	28.5016845249758	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3691	False	NA	2	True	TATAAA	-23	NA	98305801	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.4	chr7	-	7577	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	29.5691280448601	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTTAAAGACTCCTCT	3728	False	NA	NA	False	AATAAA	-29	NA	98305764	98236340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.40	chr7	-	5765	22	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-62	-565	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	24.1422466345276	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAACTGTATATACATT	3440	False	NA	2	True	TATAAA	-23	NA	98306052	98238707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.41	chr7	-	5158	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-2	-568	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	23.5441130543406	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGAACTGTATATAC	3732	False	NA	-1	True	TATAAA	-20	NA	98305760	98238710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.42	chr7	-	5231	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-66	-568	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	25.2548125226769	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTGAACTGTATATAC	3436	False	NA	-1	True	TATAAA	-20	NA	98306056	98238710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.43	chr7	-	4642	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-12	-569	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.2454017531745	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTGAACTGTATATA	3709	False	NA	-2	True	TATAAA	-19	NA	98305783	98238711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.44	chr7	-	5547	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-66	-570	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	19.5153144991312	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3436	False	NA	-3	True	TATAAA	-18	NA	98306056	98238712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.45	chr7	-	5143	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-570	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	23.6688839297926	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3690	False	NA	-3	True	TATAAA	-18	NA	98305802	98238712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.46	chr7	-	5050	20	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-7	-570	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	27.4610779709046	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3714	False	NA	-3	True	TATAAA	-18	NA	98305778	98238712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98242874_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.47	chr7	-	5119	21	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-1	-570	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	26.4107459190383	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3720	False	NA	-3	True	TATAAA	-18	NA	98305772	98238712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98242874_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.48	chr7	-	5333	22	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	2	-570	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.8533558292024	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTGAACTGTATAT	3692	False	NA	-3	True	TATAAA	-18	NA	98305800	98238712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.49	chr7	-	5139	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	184	2370	0	-571	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGTTGAACTGTATA	3690	False	NA	-4	True	TATAAA	-17	NA	98305802	98238713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.5	chr7	-	7758	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	-66	1	-62	-1	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGAATTTTAAAGACTC	3440	False	NA	NA	False	AATAAA	-25	NA	98306052	98236344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.50	chr7	-	5151	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-571	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	22.5753197480876	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGTTGAACTGTATA	3714	False	NA	-4	True	TATAAA	-17	NA	98305778	98238713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.51	chr7	-	4943	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-4	-571	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	21.2367605815953	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAATGTTGAACTGTATA	3730	False	NA	-4	True	TATAAA	-17	NA	98305762	98238713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.52	chr7	-	4687	15	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-3	-572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	26.7012955429782	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3731	False	NA	-5	True	TATAAA	-16	NA	98305761	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286645_98305680
ES.31425.53	chr7	-	6623	18	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-22	-572	intron_retention	FALSE	canonical	3	11	junction_1	24.8999381608715	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3480	False	NA	-5	True	TATAAA	-16	NA	98306012	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.54	chr7	-	4190	15	NIC	ENSMUSG00000035401.10	novel	5079	16	NA	NA	-1	-572	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	28.5175384631984	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3720	False	NA	-5	True	TATAAA	-16	NA	98305772	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.55	chr7	-	4764	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	11	-572	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	23.4837044564949	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3701	False	NA	-5	True	TATAAA	-16	NA	98305791	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.56	chr7	-	4352	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-572	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	27.6320265070966	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3714	False	NA	-5	True	TATAAA	-16	NA	98305778	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.57	chr7	-	4787	20	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-7	-572	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	25.5615058577825	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3714	False	NA	-5	True	TATAAA	-16	NA	98305778	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.58	chr7	-	5062	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-1	-572	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	25.0490930716446	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3733	False	NA	-5	True	TATAAA	-16	NA	98305759	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98242874_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.59	chr7	-	5756	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-1	-572	intron_retention	FALSE	canonical	2	3	junction_13	21.6008230295874	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3720	False	NA	-5	True	TATAAA	-16	NA	98305772	98238714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98297011_98297112_98303950_98304060_98305680
ES.31425.6	chr7	-	7366	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	19.8412383808176	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGAATTTTAAAGACT	3714	False	NA	NA	False	AATAAA	-24	NA	98305778	98236345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.61	chr7	-	4676	20	FSM	ENSMUSG00000035401.10	ENSMUST00000038359.6	3564	20	-25	-1087	-12	-577	multi-exon	FALSE	canonical	3	11	junction_1	22.53037346632	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACAAATGTTGAAC	3709	False	NA	-10	True	TATAAA	-11	NA	98305783	98238719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.62	chr7	-	4841	17	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-75	-607	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27.054848802941	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAATTTCACTATAAA	3427	False	NA	-40	True	AATAGA	-18	NA	98306065	98238749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98243958_98244520_98246066_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.63	chr7	-	4881	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-30	-609	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	25.1095378071539	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATGAATTTCACTATA	3472	False	NA	-42	True	AATAGA	-16	NA	98306020	98238751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.64	chr7	-	5330	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-55	-776	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	23.4273344621192	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAGGGTGCAGTTTGT	3447	False	NA	NA	False	NA	NA	NA	98306045	98238918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.66	chr7	-	5359	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-64	-778	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	20.3478067859224	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTAGGGTGCAGTTT	3438	False	NA	NA	False	NA	NA	NA	98306054	98238920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.67	chr7	-	5639	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-7	-778	intron_retention	FALSE	canonical	2	6	junction_3	26.4710189405319	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTAGGGTGCAGTTT	3714	False	NA	NA	False	NA	NA	NA	98305778	98238920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.68	chr7	-	3640	12	ISM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	30190	2577	-11051	-778	3prime_fragment	FALSE	canonical	3	48	junction_4	11.4675251136156	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTAGGGTGCAGTTT	8299	False	NA	NA	False	NA	NA	NA	98275796	98238920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672
ES.31425.69	chr7	-	5144	12	NNC	ENSMUSG00000035401.10	novel	5079	16	NA	NA	2068	-778	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.0026294970417	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTAGGGTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	98292335	98238920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264821_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699
ES.31425.7	chr7	-	7047	20	FSM	ENSMUSG00000035401.10	ENSMUST00000038359.6	3564	20	-32	-3451	12	-12	multi-exon	FALSE	canonical	3	11	junction_1	22.53037346632	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTACCTTATGGTGAAT	3702	False	NA	NA	False	AATAAA	-14	NA	98305790	98236355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.70	chr7	-	4424	20	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-11	127	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	25.9267025635188	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGAAACGATGCACCC	3491	False	NA	-118	True	NA	NA	NA	98306001	98239679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.71	chr7	-	4085	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	2	127	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGAAACGATGCACCC	3736	False	NA	-118	True	NA	NA	NA	98305756	98239679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.72	chr7	-	4138	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	217	3338	2	125	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAGGAAACGATGCAC	3723	False	NA	-120	True	NA	NA	NA	98305769	98239681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.73	chr7	-	4275	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	-24	3442	-20	21	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3482	False	NA	NA	False	NA	NA	NA	98306010	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.74	chr7	-	4054	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	21	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	26.6226321564245	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3691	False	NA	NA	False	NA	NA	NA	98305801	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.75	chr7	-	4070	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-22	21	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	23.0236827071154	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3480	False	NA	NA	False	NA	NA	NA	98306012	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.76	chr7	-	4320	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-23	21	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	19.749113904173	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3479	False	NA	NA	False	NA	NA	NA	98306013	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.77	chr7	-	4431	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-65	21	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3437	False	NA	NA	False	NA	NA	NA	98306055	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.78	chr7	-	4085	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-13	21	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	22.5753197480876	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3708	False	NA	NA	False	NA	NA	NA	98305784	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.79	chr7	-	3475	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-21	21	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	24.9210472041205	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3481	False	NA	NA	False	NA	NA	NA	98306011	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.8	chr7	-	7172	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	227	294	-1	-294	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAAAAGAATTCTGTT	3733	False	NA	NA	False	NA	NA	NA	98305759	98236637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.80	chr7	-	4398	22	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-5	21	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	24.1422466345276	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3729	False	NA	NA	False	NA	NA	NA	98305763	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.81	chr7	-	7094	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-5	21	intron_retention	FALSE	canonical	2	6	junction_2	22.4898989672154	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3729	False	NA	NA	False	NA	NA	NA	98305763	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98244520_98246239_98246392_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.83	chr7	-	5207	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-11	21	intron_retention	FALSE	canonical	3	18	junction_15	22.0617119871163	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3491	False	NA	NA	False	NA	NA	NA	98306001	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.84	chr7	-	4394	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	21	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	22.5075542873943	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3691	False	NA	NA	False	NA	NA	NA	98305801	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.85	chr7	-	3876	19	NNC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	0	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.3972265875829	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3734	False	NA	NA	False	NA	NA	NA	98305758	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246236_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.86	chr7	-	3922	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-9	21	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.5404996687356	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3712	False	NA	NA	False	NA	NA	NA	98305780	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.87	chr7	-	4141	20	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	21	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	26.1031408305368	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3691	False	NA	NA	False	NA	NA	NA	98305801	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289088_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.88	chr7	-	4340	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-85	21	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.478198699858	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3417	False	NA	NA	False	NA	NA	NA	98306075	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.89	chr7	-	7308	17	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	31	21	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	25.7023223658875	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	NA	False	NA	NA	False	NA	NA	NA	98294372	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289088_98290699
ES.31425.9	chr7	-	5341	15	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	544	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	31.4675083480191	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGTATATATATGTGT	3691	False	NA	NA	False	TTTAAA	-20	NA	98305801	98237598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.90	chr7	-	3427	17	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-1	21	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	23.5497312882759	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGCTCATATTTAGG	3733	False	NA	NA	False	NA	NA	NA	98305759	98239785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.91	chr7	-	3543	18	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	20	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.1095103931993	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGCTCATATTTAG	3691	False	NA	NA	False	NA	NA	NA	98305801	98239786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.93	chr7	-	3579	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	1	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	20.2039752841848	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3691	False	NA	NA	False	NA	NA	NA	98305801	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.94	chr7	-	3985	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	22.7835358575626	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3690	False	NA	NA	False	NA	NA	NA	98305802	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98297011_98297112_98303950_98304060_98305680
ES.31425.95	chr7	-	3933	19	NNC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-57	14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	25.7542996530149	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3445	False	NA	NA	False	NA	NA	NA	98306047	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289088_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.96	chr7	-	3258	16	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	-2	14	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	24.9047965036635	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3719	False	NA	NA	False	NA	NA	NA	98305773	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98297011_98297112_98303950_98304060_98305680
ES.31425.97	chr7	-	3580	19	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	0	14	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.2454017531745	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3690	False	NA	NA	False	NA	NA	NA	98305802	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31425.99	chr7	-	4485	21	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	-20	14	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	22.663847863944	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAGCACTTTGCTCAT	3482	False	NA	NA	False	NA	NA	NA	98306010	98239792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98240092_98242537_98243193_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ES.31426.1	chr7	+	1025	1	Intergenic	novelGene_25785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGCTCTCCTGGCCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	98306125	98307150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98306100_98307200
ES.31427.1	chr7	-	568	3	ISM	ENSMUSG00000086477.4	ENSMUST00000148776.2	1133	4	7	10660	7	6229	5prime_fragment	FALSE	canonical	3	5	junction_2	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACGTCAGTCTGTGAT	9371	False	NA	NA	False	NA	NA	NA	98352128	98342202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_98342478_98342554_98342809_98352089
ES.31427.2	chr7	-	4364	1	FSM	ENSMUSG00000086477.4	ENSMUST00000208646.2	3664	1	1480	-2180	1026	2180	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCACTTCATTGTTGTCT	9837	False	NA	NA	False	NA	NA	NA	98350615	98346251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98346300_98350600
ES.31428.1	chr7	+	5898	4	ISM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-89	0	-89	0	intron_retention	FALSE	canonical	3	192	junction_2	20.8859335970941	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352220	98367269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065
ES.31428.10	chr7	+	3640	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6502241479364	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCAGGTGAGGTGTTT	NA	False	NA	9	True	AATAAA	-16	NA	98352305	98367266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352500_98352583_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.12	chr7	+	3645	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6502241479364	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGGTGTTTTTGGTGG	NA	False	NA	16	True	AATAAA	-23	NA	98352306	98367273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352494_98352578_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.13	chr7	+	3629	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-2	96	-2	-96	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATACAGAAAATAT	NA	False	NA	-84	True	AATAAA	-18	NA	98352307	98367173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.14	chr7	+	3720	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	1	-2598	1	-97	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAATACAGAAAATA	NA	False	NA	-85	True	AATAAA	-17	NA	98352310	98367172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.15	chr7	+	3845	6	NNC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.4004739323186	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352312	98367269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352686_98356173_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.16	chr7	+	4001	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	10	-2888	10	193	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGGTGGATCTCTTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	98352319	98367462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.18	chr7	+	3608	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.981536822649	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352325	98367269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352478_98352580_98352686_98356203_98356325_98359332_98359441_98362065_98362107_98364188
ES.31428.19	chr7	+	4360	6	NIC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	24	508	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	94.1118483507789	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTGTTAGAGTTCTG	NA	False	NA	NA	False	TATAAA	-12	NA	98352333	98367777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362161_98364188
ES.31428.2	chr7	+	3817	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-89	-5	-89	5	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGGTGTTTTTGGTGGG	NA	False	NA	17	True	AATAAA	-24	NA	98352220	98367274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.20	chr7	+	4525	5	NIC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	24	-88	intron_retention	FALSE	canonical	3	39	junction_2	75.7013044801739	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAAATATTGCTGTTA	NA	False	NA	-76	True	AATAAA	-26	NA	98352333	98367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98352686_98356203_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.23	chr7	+	3533	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.6502241479364	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCAGGTGAGGTGTTT	NA	False	NA	9	True	AATAAA	-16	NA	98352337	98367266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188_98364456_98364614
ES.31428.24	chr7	+	3495	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	28	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.6502241479364	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTGTTTTTGGTGGGT	NA	False	NA	18	True	AATAAA	-25	NA	98352337	98367275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188_98364266_98364471
ES.31428.25	chr7	+	4453	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	29	-759	29	759	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGGTTGGTTAAATGAT	NA	False	NA	NA	False	NA	NA	NA	98352338	98368028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.26	chr7	+	2937	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	164	-1978	-61	-717	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGATATGACATTA	NA	False	NA	NA	False	NA	NA	NA	98352473	98366552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.27	chr7	+	2710	5	NNC	ENSMUSG00000030753.16	novel	670	3	NA	NA	468	-698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.3737818501716	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTCGATCCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	98353002	98366571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98353064_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.28	chr7	+	3608	1	Genic_Genomic	ENSMUSG00000030753.16	novel	NA	NA	NA	NA	7373	2795	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGAGCCTGCAACTTC	NA	False	NA	NA	False	NA	NA	NA	98366456	98370064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_98366500_98370100
ES.31428.3	chr7	+	3110	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-85	698	-85	-698	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTCGATCCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	98352224	98366571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.4	chr7	+	3885	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	-63	-2699	-63	4	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGGTGTTTTTGGTGG	NA	False	NA	16	True	AATAAA	-23	NA	98352246	98367273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ES.31428.5	chr7	+	3934	6	NIC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	94.1118483507789	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352251	98367269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362161_98364188
ES.31428.6	chr7	+	3381	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	-57	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	81.3107618953358	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATTTCAGGTGAGGTG	NA	False	NA	6	True	AATAAA	-13	NA	98352252	98367263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188_98364659_98365051
ES.31428.7	chr7	+	3834	5	FSM	ENSMUSG00000030753.16	ENSMUST00000153566.2	607	5	-276	-2951	-51	2	multi-exon	FALSE	canonical	3	19	junction_4	84.5192285814299	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGAGGTGTTTTTGGT	NA	False	NA	14	True	AATAAA	-21	NA	98352258	98367271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362161_98364188
ES.31428.8	chr7	+	3962	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	-46	-193	-46	193	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGGTGGATCTCTTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	98352263	98367462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31428.9	chr7	+	3682	6	NNC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.6502241479364	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCAGGTGAGGTGTTT	NA	False	NA	9	True	AATAAA	-16	NA	98352265	98367266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98352491_98352572_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ES.31429.1	chr7	-	1756	1	Intergenic	novelGene_25786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAATAAAA	2436	False	NA	NA	False	AATAAA	-8	NA	98359063	98357307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98357300_98359100
ES.3143.1	chr10	+	176	1	ISM	ENSMUSG00000086798.2	ENSMUST00000124320.2	1298	3	1599	111	1599	-111	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	75916049	75916225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_75916000_75916200
ES.31430.1	chr7	+	190	1	Intergenic	novelGene_25787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAATAG	NA	False	NA	NA	False	NA	NA	NA	98430553	98430743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98430600_98430700
ES.31431.1	chr7	+	168	1	Intergenic	novelGene_25788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGAATCTTTTTTT	NA	False	NA	9	True	NA	NA	NA	98439098	98439266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98439100_98439300
ES.31432.1	chr7	+	215	1	Intergenic	novelGene_25789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTAGAGGGATGAGGG	NA	False	NA	NA	False	NA	NA	NA	98478752	98478967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98478800_98479000
ES.31433.1	chr7	+	2014	6	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	-52	36	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	6.20966987850401	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGCCCCCAAATCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	98484266	98503054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496659_98499433_98499727_98502319
ES.31433.2	chr7	+	2236	8	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	0	36	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.8759236060996	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGCCCCCAAATCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	98484318	98503054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98484556_98485268_98485429_98488214_98488398_98495580_98495817_98496380_98496659_98498310_98498425_98499433_98499727_98502319
ES.31433.3	chr7	+	2038	7	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	10.0995049383621	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAGTGTGTGAAATAA	NA	False	NA	NA	False	NA	NA	NA	98484320	98503018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496659_98498310_98498425_98499433_98499727_98502319
ES.31433.4	chr7	+	1796	6	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	2	36	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	8.48528137423857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGCCCCCAAATCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	98484320	98503054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496495_98499433_98499727_98502319
ES.31433.5	chr7	+	2693	6	NIC	ENSMUSG00000015957.13	novel	3451	7	NA	NA	6	-447	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	8.48528137423857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGAACCACTTGTTCTTT	NA	False	NA	NA	False	AATATA	-19	NA	98484324	98503955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496495_98499433_98499727_98502319
ES.31433.6	chr7	+	1741	5	FSM	ENSMUSG00000015957.13	ENSMUST00000167303.8	1792	5	147	-96	94	36	multi-exon	FALSE	canonical	3	14	junction_3	5.21416340365355	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGCCCCCAAATCTCTG	1301	False	NA	NA	False	AATAAA	-16	NA	98488198	98503054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98488398_98495580_98495817_98496380_98496659_98499433_98499727_98502319
ES.31434.1	chr7	-	1531	2	Intergenic	novelGene_25790	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGGGGCCTCCATGCCC	NA	False	NA	NA	False	NA	NA	NA	98521642	98518513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98519811_98521408
ES.31435.1	chr7	+	1696	2	Antisense	novelGene_ENSMUSG00000035354.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAAATGGCTTCTCTTT	2197	False	NA	NA	False	AATAAA	-9	NA	98535497	98538357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_98535604_98536767
ES.31436.1	chr7	+	3116	1	Intergenic	novelGene_25791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGGGCCTCAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	98577318	98580434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98577300_98580400
ES.31437.1	chr7	+	5710	1	Antisense	novelGene_ENSMUSG00000035354.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGTCTCACCTAGT	NA	False	NA	NA	False	NA	NA	NA	98760287	98765997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_98760300_98766000
ES.31438.1	chr7	-	5157	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	0	35	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGAGTCCTGTCTTCT	NA	False	NA	0	True	NA	NA	NA	98790348	98534192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
ES.31438.10	chr7	-	3039	15	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.0395923883944	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGATTTCCCCCCCAGC	NA	False	NA	-17	True	AATAAA	-20	NA	98790348	98535955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98536585_98536939_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
ES.31438.11	chr7	-	2922	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15779	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98681630	98535956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681355
ES.31438.12	chr7	-	3332	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.2432467482819	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98790344	98535956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.13	chr7	-	3495	16	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.6717146152832	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGATTTCCCCCCCA	NA	False	NA	-19	True	AATAAA	-18	NA	98790327	98535957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98547501_98547587_98555694_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.15	chr7	-	3259	13	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	47.6050738425596	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGATTTCCCCCCC	NA	False	NA	-20	True	AATAAA	-17	NA	98790334	98535958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98790040
ES.31438.16	chr7	-	3154	12	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	49.5508754332186	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGATTTCCCCCCC	NA	False	NA	-20	True	AATAAA	-17	NA	98790348	98535958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98767394_98767513_98790040
ES.31438.17	chr7	-	3208	13	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	47.6401441363619	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGATTTCCCCCCC	NA	False	NA	-20	True	AATAAA	-17	NA	98790319	98535958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.18	chr7	-	3052	16	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.2438049513068	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACCTGATTTCCCCCC	NA	False	NA	-21	True	AATAAA	-16	NA	98790330	98535959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98536585_98536939_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.19	chr7	-	2778	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15776	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGACCTGATTTCCCC	NA	False	NA	-23	True	AATAAA	-14	NA	98681627	98535961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681491
ES.31438.2	chr7	-	4590	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15779	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	49.6083425879255	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAGTTAAAAGT	NA	False	NA	-38	True	AATAAA	-13	NA	98681630	98534230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681413
ES.31438.20	chr7	-	3406	14	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	46.296446372757	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGACCTGATTTCCCC	NA	False	NA	-23	True	AATAAA	-14	NA	98790351	98535961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748696_98767394_98767513_98790040
ES.31438.21	chr7	-	2898	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	0	2259	0	-530	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAATGATGTTCTGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	98790348	98536486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.22	chr7	-	2501	1	Intergenic	novelGene_25792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98683584	98681083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98681100_98683600
ES.31438.23	chr7	-	185	1	Intergenic	novelGene_25793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATAAGTCACTTGGGT	1695	False	NA	NA	False	NA	NA	NA	98701221	98701036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98701000_98701200
ES.31438.24	chr7	-	108	1	Intergenic	novelGene_25794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAACAATAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	98776668	98776560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98776600_98776700
ES.31438.3	chr7	-	3758	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	-311	1710	-311	19	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTGGTGTTTTCCC	NA	False	NA	1	True	AATAAA	-38	NA	98790659	98535937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.4	chr7	-	3310	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	46.3969239951639	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98790334	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ES.31438.5	chr7	-	3397	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98790350	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
ES.31438.6	chr7	-	3499	16	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	57.5349169345595	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98790329	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98763824_98763913_98767394_98767513_98790040
ES.31438.7	chr7	-	2954	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15775	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.9158008402631	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98681626	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681321
ES.31438.8	chr7	-	2866	10	NNC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	-15779	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	49.6083425879255	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98681630	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681413
ES.31438.9	chr7	-	2145	4	FSM	ENSMUSG00000035354.10	ENSMUST00000207919.2	376	4	-8	-1761	-8	2	multi-exon	FALSE	canonical	0	0	junction_3	76.524505878836	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTTCCCCCCCAGCT	NA	False	NA	-16	True	AATAAA	-21	NA	98593120	98535954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98592991
ES.31439.1	chr7	-	173	1	Intergenic	novelGene_25795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	98795941	98795768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98795800_98795900
ES.3144.1	chr10	-	3107	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4504	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGGCCCGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	75951299	75893324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
ES.3144.2	chr10	-	3084	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4506	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.75255053853803	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGATGGCCCGTTATCT	NA	False	NA	NA	False	NA	NA	NA	75951301	75893326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944414_75945851_75945924_75951237
ES.3144.3	chr10	-	1958	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4494	-1136	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGGTAAATGACCGGG	NA	False	NA	NA	False	TATAAA	-12	NA	75951289	75894463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
ES.3144.4	chr10	-	1432	11	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4522	-12803	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_8	2.78567765543682	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCACTGTCTGATTGTT	NA	False	NA	NA	False	AATGAA	-18	NA	75951317	75906130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
ES.3144.5	chr10	-	185	1	Intergenic	novelGene_2473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACATTAAAAC	4737	False	NA	NA	False	NA	NA	NA	75927766	75927581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75927600_75927800
ES.31440.1	chr7	-	2255	8	NNC	ENSMUSG00000030747.6	novel	2262	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.6015984404354	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831926	98802864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813906_98814288_98814397_98818904_98819034_98831598
ES.31440.2	chr7	-	2327	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	-65	0	-65	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831991	98802864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
ES.31441.1	chr7	+	175	1	Intergenic	novelGene_25796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACGGATGAGCTG	429	False	NA	NA	False	NA	NA	NA	98835540	98835715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_98835500_98835700
ES.31442.1	chr7	-	1834	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	-56	2	-56	-2	multi-exon	FALSE	canonical	3	105	junction_3	4.4	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTTCTTTTCTCTCT	NA	False	NA	-3	True	AATAAA	-18	NA	98887882	98868292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ES.31443.1	chr7	-	176	1	Intergenic	novelGene_25797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGCAACGTGAGCCG	NA	False	NA	NA	False	NA	NA	NA	98899736	98899560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98899600_98899700
ES.31444.1	chr7	-	171	1	Intergenic	novelGene_25798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAAAATAAGGG	NA	False	NA	NA	False	NA	NA	NA	98906852	98906681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_98906700_98906900
ES.31445.1	chr7	+	4905	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	18	-3	18	3	multi-exon	FALSE	canonical	3	32	junction_2	24	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGATCGTATTTCCT	NA	False	NA	9	True	AATAAA	-19	NA	98916713	98969562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98966678
ES.31445.10	chr7	+	1744	3	NNC	ENSMUSG00000055407.15	novel	3233	3	NA	NA	60053	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98978391	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98978662_98979570_98979893_98985191
ES.31445.11	chr7	+	1196	1	NIC	ENSMUSG00000055407.15	novel	3233	3	NA	NA	66809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98985147	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_98985100_98986300
ES.31445.2	chr7	+	2359	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	-25	1	-25	0	multi-exon	FALSE	canonical	3	44	junction_2	18	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98917527	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98985191
ES.31445.3	chr7	+	3954	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	864	102	7	-102	multi-exon	FALSE	canonical	3	32	junction_2	24	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTGACGTCACGTGG	NA	False	NA	-96	True	AGTAAA	-41	NA	98917559	98969457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98966678
ES.31445.4	chr7	+	1928	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	876	2116	19	-2116	multi-exon	FALSE	canonical	3	32	junction_2	24	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGGAGTGTGTGCCTGT	NA	False	NA	NA	False	AAGAAA	-18	NA	98917571	98967443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98966678
ES.31445.5	chr7	+	1359	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	879	2682	22	-2682	multi-exon	FALSE	canonical	3	32	junction_2	24	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCACCGCACTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	98917574	98966877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98966678
ES.31445.6	chr7	+	2499	4	FSM	ENSMUSG00000055407.15	ENSMUST00000208924.2	2906	4	406	1	-28	0	multi-exon	FALSE	canonical	0	0	junction_3	32.8768746825012	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98917584	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
ES.31445.7	chr7	+	3117	3	NNC	ENSMUSG00000109460.2	novel	843	2	NA	NA	729	14681	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98971135	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98972995_98979570_98979677_98985191
ES.31445.8	chr7	+	1476	2	NNC	ENSMUSG00000055407.15	novel	3233	3	NA	NA	59999	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98978337	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98978662_98985191
ES.31445.9	chr7	+	1540	3	NNC	ENSMUSG00000055407.15	novel	3233	3	NA	NA	60041	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	98978379	98986343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_98978662_98979570_98979677_98985191
ES.31446.1	chr7	-	4371	2	Antisense	novelGene_ENSMUSG00000055407.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTCTTCTACATTC	NA	False	NA	NA	False	AATAAA	-19	NA	98954292	98949479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_98953592_98954033
ES.31446.2	chr7	-	4787	2	Antisense	novelGene_ENSMUSG00000055407.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAATGTCTTCTACAT	NA	False	NA	NA	False	AATAAA	-17	NA	98954308	98949481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_98953821_98953860
ES.31446.3	chr7	-	2578	3	Antisense	novelGene_ENSMUSG00000055407.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTTTTAATGTCTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	98954204	98949485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_98951462_98953160_98953592_98954033
ES.31447.1	chr7	-	2259	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	-33	-11	-33	-2	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAAGCCTGTGATTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	99002479	98994584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
ES.31447.10	chr7	-	2259	6	NIC	ENSMUSG00000070436.13	novel	2128	6	NA	NA	1	-34	intron_retention	FALSE	canonical	3	14	junction_5	745.240202887633	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGTGTGAAAGCAGAT	NA	False	NA	50	True	AATAAA	-20	NA	99002320	98994635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002093
ES.31447.11	chr7	-	1387	4	NIC	ENSMUSG00000070436.13	novel	2215	5	NA	NA	1	-34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	760.740574849417	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGTGTGAAAGCAGAT	NA	False	NA	50	True	AATAAA	-20	NA	99002320	98994635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_98995630_98996131_98996365_98996472_98996572_99002259
ES.31447.12	chr7	-	5770	4	ISM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	-9	42	-9	-36	intron_retention	FALSE	canonical	3	1484	junction_1	103.054462408099	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGGTGTGTGAAAGCAG	NA	False	NA	48	True	AATAAA	-18	NA	99002455	98994637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009
ES.31447.14	chr7	-	2377	6	NNC	ENSMUSG00000070436.13	novel	2128	6	NA	NA	-2635	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	748.841398428265	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTATAGGTGTGTGAA	NA	False	NA	43	True	AATAAA	-13	NA	99005081	98994642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99004729
ES.31447.16	chr7	-	2040	5	NNC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	-31	-45	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_4	665.34690199925	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAATGTTATAGGTGTG	NA	False	NA	39	True	AATAAA	-9	NA	99002235	98994646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002172
ES.31447.18	chr7	-	1993	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	128	94	3	-88	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAGTTTGTACAAGTTT	NA	False	NA	-4	True	NA	NA	NA	99002318	98994689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
ES.31447.2	chr7	-	2271	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	1	2	1	-2	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAAGCCTGTGATTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	99002320	98994584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
ES.31447.4	chr7	-	3349	5	ISM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	-30	-6	-30	0	intron_retention	FALSE	canonical	3	111	junction_4	639.610428307732	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCTTTCTAAGACAAAG	NA	False	NA	90	True	ATTAAA	-17	NA	99002351	98994595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030
ES.31447.5	chr7	-	7149	3	ISM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	-34	0	-34	0	intron_retention	FALSE	canonical	3	1484	junction_1	117	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002355	98994596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_98995630_98996131_98996365_98996472
ES.31447.6	chr7	-	2161	6	NNC	ENSMUSG00000070436.13	novel	2173	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	775.057778491385	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTCTTTCTAAGACA	NA	False	NA	87	True	ATTAAA	-14	NA	99002320	98994598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_98999416_98999492_99002259
ES.31447.7	chr7	-	2081	5	NNC	ENSMUSG00000070436.13	novel	2215	5	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_4	656.33694662117	950	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATCATTCTTTCTAAGAC	NA	False	NA	86	True	ATTAAA	-13	NA	99002325	98994599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998663_99002259
ES.31447.8	chr7	-	2133	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	1	39	1	-34	multi-exon	FALSE	canonical	3	37	junction_5	754.843400977978	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGTGTGAAAGCAGAT	NA	False	NA	50	True	AATAAA	-20	NA	99002320	98994635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
ES.31447.9	chr7	-	2247	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	-153	34	-28	-34	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGTGTGTGAAAGCAGAT	NA	False	NA	50	True	AATAAA	-20	NA	99002474	98994635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
ES.31448.1	chr7	+	155	1	Intergenic	novelGene_25799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	99007149	99007304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99007100_99007300
ES.31449.1	chr7	+	380	1	Intergenic	novelGene_25800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGTCTGGAGAT	NA	False	NA	NA	False	NA	NA	NA	99018709	99019089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99018700_99019100
ES.3145.1	chr10	-	176	1	Intergenic	novelGene_2474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAACAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	75963981	75963805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_75963800_75964000
ES.31450.1	chr7	+	4532	17	NIC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	-1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.24037034920393	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTCAATTCTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	99030619	99111089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99031416_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.10	chr7	+	2964	12	ISM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	59889	894	-617	-2	3prime_fragment	FALSE	canonical	1	1	junction_10	3.44496278572662	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTGTCTCTGAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	99090509	99110190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.11	chr7	+	4389	1	FSM	ENSMUSG00000035314.11	ENSMUST00000208947.2	1865	1	-2509	-15	2448	15	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTCTGGGTGTCCATG	NA	False	NA	NA	False	NA	NA	NA	99093574	99097963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99093600_99098000
ES.31450.2	chr7	+	4105	20	NNC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.23245316479665	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTGTCTCTGAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	99030621	99110190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99031416_99036310_99036396_99054298_99054407_99059615_99059699_99073259_99073437_99087454_99087559_99087789_99087952_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098029_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.3	chr7	+	3717	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	1	893	1	-1	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99030621	99110191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.4	chr7	+	3775	18	NNC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2.91280433015058	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGTCTCTGAA	NA	False	NA	NA	False	ATTAAA	-11	NA	99030621	99110188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102412_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.5	chr7	+	3606	17	NIC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.20582965080804	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTGTCTCTGAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	99030627	99110190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.6	chr7	+	3810	19	NNC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	70	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.11309460580487	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	NA	False	NA	NA	False	ATTAAA	-14	NA	99030690	99110191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99087789_99087952_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.7	chr7	+	3545	17	NIC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	88	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.19117435280494	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGTTGTCTCTGAAT	NA	False	NA	NA	False	ATTAAA	-12	NA	99030708	99110189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99031416_99036310_99036396_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.8	chr7	+	4490	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	92	29	92	-29	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGCAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	99030712	99111055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31450.9	chr7	+	3707	19	NIC	ENSMUSG00000035314.11	novel	4611	18	NA	NA	116	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.11903752169293	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGTCTCTGAA	NA	False	NA	NA	False	ATTAAA	-11	NA	99030736	99110188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99031416_99036310_99036396_99054298_99054407_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ES.31451.1	chr7	-	206	1	Intergenic	novelGene_25801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99081064	99080858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99080900_99081100
ES.31452.1	chr7	+	253	1	Intergenic	novelGene_25802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACCACCAGAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99113254	99113507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99113300_99113500
ES.31452.2	chr7	+	188	2	Intergenic	novelGene_25803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACTTGGTAACTTAACT	NA	False	NA	NA	False	NA	NA	NA	99113255	99113566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99113427_99113549
ES.31453.1	chr7	+	172	1	Intergenic	novelGene_25804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99124638	99124810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99124600_99124800
ES.31454.1	chr7	-	2260	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	91	-443	3	443	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTCACTGTATCACAGC	8426	False	NA	NA	False	NA	NA	NA	99132854	99126659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.12	chr7	-	1895	5	NIC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	208	0	combination_of_known_junctions	FALSE	canonical	3	4974	junction_1	3987.39999874605	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAGGCCTGACT	8647	False	NA	-45	True	AATAAA	-25	NA	99132633	99128099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99128159_99128480_99129271_99130903_99130999_99131467_99131562_99131776
ES.31454.16	chr7	-	826	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5258.16724777327	1350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAGGCCTGACT	8414	False	NA	-45	True	AATAAA	-25	NA	99132866	99128099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128486_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.19	chr7	-	812	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5582.89117652215	1350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAGGCCTGACT	8427	False	NA	-45	True	AATAAA	-25	NA	99132853	99128099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128480_99128671_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.2	chr7	-	1817	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	119	junction_6	5708.79212754813	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTATGCAATTATTTGA	8422	False	NA	-9	True	AATAAA	-32	NA	99132858	99127099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131901_99132798
ES.31454.23	chr7	-	584	6	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5844.15973772107	1350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAGGCCTGACT	8422	False	NA	-45	True	AATAAA	-25	NA	99132858	99128099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128480_99128678_99129082_99129173_99131514_99131562_99131776_99131908_99132798
ES.31454.26	chr7	-	814	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5693.09817283661	1350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAACAAAGACAAGGCCT	8422	False	NA	-49	True	AATAAA	-21	NA	99132858	99128103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128480_99128678_99129082_99129265_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.3	chr7	-	1806	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	15	0	-7	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGTTGATTAAACTCAT	8422	False	NA	-27	True	AATAAA	-14	NA	99132858	99127117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.4	chr7	-	1488	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	-1	-312	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5693.09817283661	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGGTGTGTTTTGTGG	8436	False	NA	NA	False	NA	NA	NA	99132844	99127422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99128159_99128480_99128678_99129082_99129272_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.5	chr7	-	1312	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	509	0	477	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATGTATTTCTGTTTT	8422	False	NA	NA	False	NA	NA	NA	99132858	99127611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.6	chr7	-	1077	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	86	745	-1	241	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTAGTCTTTCTTGCT	8421	False	NA	NA	False	NA	NA	NA	99132859	99127847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31454.7	chr7	-	945	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	10	953	10	33	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTGTCTATGGAGCC	8345	False	NA	-1	True	NA	NA	NA	99132935	99128055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ES.31455.1	chr7	-	176	1	Intergenic	novelGene_25805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGTGAACAGGGCTGG	3069	False	NA	NA	False	NA	NA	NA	99138211	99138035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99138000_99138200
ES.31456.1	chr7	-	265	1	Intergenic	novelGene_25806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	7704	False	NA	NA	False	NA	NA	NA	99154517	99154252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99154300_99154500
ES.31457.1	chr7	+	3281	3	Intergenic	novelGene_25807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCGGGGAACCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99157646	99164731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99157763_99161523_99164620_99164662
ES.31457.2	chr7	+	4212	2	Intergenic	novelGene_25808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCGGGGAACCCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99160476	99164731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99164620_99164662
ES.31458.1	chr7	+	180	1	Intergenic	novelGene_25809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGAGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	99182614	99182794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99182600_99182800
ES.31459.1	chr7	+	7805	16	NNC	ENSMUSG00000018909.16	novel	7132	16	NA	NA	-1	714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.23395718803251	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTGTCCCACTGTTCT	NA	False	NA	NA	False	NA	NA	NA	99184671	99256692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237246_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ES.31459.2	chr7	+	7136	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	-1	-3	-1	3	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTTTTCATTTCTTG	NA	False	NA	19	True	ATTAAA	-24	NA	99184671	99255981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ES.31459.3	chr7	+	4221	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	8	2903	8	294	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGGCCTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	99184680	99253075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ES.31459.4	chr7	+	1908	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	22	5202	22	414	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGATGTCTGTAGTCCC	NA	False	NA	NA	False	NA	NA	NA	99184694	99250776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ES.31459.5	chr7	+	7019	14	NIC	ENSMUSG00000018909.16	novel	3715	15	NA	NA	59	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.83360994292702	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTGTTTTCATTTCT	NA	False	NA	17	True	ATTAAA	-22	NA	99184731	99255979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99185006_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99247697_99247769_99249007_99249060_99250304
ES.31459.6	chr7	+	3328	16	NNC	ENSMUSG00000018909.16	novel	434	6	NA	NA	6549	-519	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	5.82485097568074	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCCAGTGTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	99228819	99252262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99229065_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ES.31459.7	chr7	+	3511	1	ISM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	66116	1679	6959	1518	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAATGAGACTTCTCTG	NA	False	NA	NA	False	TTTAAA	-7	NA	99250788	99254299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_99250800_99254300
ES.3146.1	chr10	+	677	2	NNC	ENSMUSG00000020229.5	novel	2055	15	NA	NA	40203	186	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACCAGTGTGACTTC	NA	False	NA	NA	False	AATAAA	-19	NA	76023487	76025285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76023772_76024892
ES.31460.1	chr7	-	177	1	Intergenic	novelGene_25810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	99196637	99196460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99196500_99196600
ES.31461.1	chr7	-	178	1	Intergenic	novelGene_25811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCATT	4158	False	NA	NA	False	NA	NA	NA	99234435	99234257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99234300_99234400
ES.31462.1	chr7	+	1494	1	Intergenic	novelGene_25812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	99266721	99268215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99266700_99268200
ES.31463.1	chr7	+	1679	2	ISM	ENSMUSG00000097974.2	ENSMUST00000182342.2	665	3	-210	2577	-7	1	5prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTTTGCTCCCTGA	5946	False	NA	NA	False	AATAAA	-21	NA	99275135	99278341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_99275560_99277086
ES.31464.1	chr7	-	4026	14	FSM	ENSMUSG00000030737.18	ENSMUST00000107088.8	4369	14	321	22	321	-22	multi-exon	FALSE	canonical	0	0	junction_5	2.1483446221183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTCTTCCACGACAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	99356047	99307617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340963_99341101_99355717
ES.31464.3	chr7	-	3904	13	NNC	ENSMUSG00000030737.18	novel	4381	14	NA	NA	114	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.28977194400568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGACTCTTCCACGACA	9303	False	NA	NA	False	ATTAAA	-12	NA	99340862	99307619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340515
ES.31464.4	chr7	-	2452	13	NNC	ENSMUSG00000030737.18	novel	4381	14	NA	NA	154	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.28977194400568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTGTTGGCCATTT	9343	False	NA	NA	False	NA	NA	NA	99340822	99309031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340515
ES.31465.1	chr7	+	176	1	Intergenic	novelGene_25813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCCATAATA	NA	False	NA	NA	False	NA	NA	NA	99424602	99424778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99424600_99424800
ES.31466.1	chr7	-	4661	5	NNC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.6393596310755	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGAGTTAGATAGTTT	6039	False	NA	NA	False	AATAAA	-20	NA	99477610	99460640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99463515_99472528_99472741_99474182_99474333_99474883_99474956_99476257
ES.31466.10	chr7	-	1559	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	15	1335	15	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGTCTTGAAAGAAG	NA	False	NA	-3	True	AATAAA	-18	NA	99508169	99488110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ES.31466.18	chr7	-	1574	6	FSM	ENSMUSG00000035227.8	ENSMUST00000208477.2	1553	6	-25	4	-8	-3	multi-exon	FALSE	canonical	2	18	junction_5	975.780180163545	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGGAGTCTTGAAAG	NA	False	NA	-6	True	AATAAA	-15	NA	99508091	99488113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99498363_99498460_99507970
ES.31466.19	chr7	-	1419	6	NNC	ENSMUSG00000035227.8	novel	1630	6	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	936.80614857077	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGGAGTCTTGAAAG	NA	False	NA	-6	True	AATAAA	-15	NA	99508092	99488113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99493939_99493998_99494042_99497505_99497667_99498182_99498267_99507970
ES.31466.2	chr7	-	3322	3	FSM	ENSMUSG00000035239.7	ENSMUST00000036331.7	3341	3	19	0	19	0	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTGGAGTGAGTTAGAT	6044	False	NA	NA	False	AATAAA	-15	NA	99477605	99460645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99463515_99472528_99472741_99477364
ES.31466.20	chr7	-	1487	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	927.677038359795	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGAGTCTTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	99508108	99488115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498261_99507970
ES.31466.21	chr7	-	1448	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1043.87391480006	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGAGTCTTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	99508099	99488115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99494006_99497505_99497667_99498182_99498267_99507970
ES.31466.25	chr7	-	2439	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1043.87391480006	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGAGTCTTGAA	NA	False	NA	-8	True	AATAAA	-13	NA	99508101	99488115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99494995_99497505_99497667_99498182_99498267_99507970
ES.31466.3	chr7	-	3550	4	NNC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.49443825784929	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGGAGTGAGTTAGA	6046	False	NA	NA	False	AATAAA	-14	NA	99477603	99460646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99463515_99472528_99472741_99474883_99475105_99477354
ES.31466.30	chr7	-	1389	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-10	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1043.87391480006	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGTTTTCCACTC	NA	False	NA	-16	True	ATTAAA	-26	NA	99508093	99488209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99494040_99497498_99497667_99498182_99498267_99507970
ES.31466.31	chr7	-	1516	6	FSM	ENSMUSG00000035227.8	ENSMUST00000209032.2	1610	6	-5	99	-5	-99	multi-exon	FALSE	canonical	2	16	junction_4	1023.35436677624	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGTTTTCCACTC	NA	False	NA	-16	True	ATTAAA	-26	NA	99508123	99488209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99505619_99505722_99507970
ES.31466.34	chr7	-	1377	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-10	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1043.87391480006	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTATATTCTCTGTTTT	NA	False	NA	-22	True	ATTAAA	-20	NA	99508093	99488215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99494041_99497505_99497667_99498182_99498267_99507970
ES.31466.36	chr7	-	832	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	95	1982	-6	-123	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGTTGTCCCTTTGA	NA	False	NA	NA	False	AATAGA	-15	NA	99508089	99488757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ES.31466.37	chr7	-	734	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	63	2112	-3	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508121	99488887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ES.31466.38	chr7	-	1946	5	NNC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1043.87391480006	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99508122	99488887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99489091_99493906_99493995_99496247_99497667_99498182_99498267_99507970
ES.31466.4	chr7	-	3343	4	NNC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.05480466765633	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGGAGTGAGTTAG	6093	False	NA	NA	False	AATAAA	-13	NA	99477556	99460647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99463515_99472528_99472741_99474883_99474956_99477364
ES.31466.42	chr7	-	1226	4	NIC	ENSMUSG00000035227.8	novel	2909	5	NA	NA	1	-4	intron_retention	FALSE	canonical	2	1599	junction_2	422.213479441647	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTCTCCTTCTGCTGG	NA	False	NA	-10	True	AATAAA	-13	NA	99508105	99488895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99489091_99493906_99494042_99497505_99498267_99507970
ES.31466.46	chr7	-	1732	5	NNC	ENSMUSG00000035227.8	novel	688	4	NA	NA	-8	958	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1005.10605783668	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99508091	99492753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99494042_99497505_99497667_99498182_99498267_99507613_99507692_99507970
ES.31466.5	chr7	-	2750	4	NNC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.88561808316413	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGGAGTGAGTTAG	6035	False	NA	NA	False	AATAAA	-13	NA	99477614	99460647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99461918_99462496_99463515_99472528_99472741_99477364
ES.31466.6	chr7	-	3352	4	NNC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	68	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.49443825784929	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCTTGGAGTGAGTTA	6093	False	NA	NA	False	AATAAA	-12	NA	99477556	99460648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99463515_99472528_99472741_99474883_99474956_99477354
ES.31466.7	chr7	-	3066	2	NIC	ENSMUSG00000035239.7	novel	3341	3	NA	NA	60	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCTTGGAGTGAGTTA	6085	False	NA	NA	False	AATAAA	-12	NA	99477564	99460648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99463515_99477364
ES.31466.8	chr7	-	2958	6	Fusion	ENSMUSG00000035239.7_ENSMUSG00000035227.8	novel	688	4	NA	NA	-6	-641	multi-exon	FALSE	non_canonical	0	0	junction_3	1208.68358142237	576	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99508112	99461286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_99463515_99472528_99472741_99493906_99494038_99497505_99497667_99498182_99498267_99507970
ES.31466.9	chr7	-	4961	4	NIC	ENSMUSG00000035227.8	novel	1630	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	2242	junction_1	167.501907120155	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTCTTGAAAGAAGG	NA	False	NA	-2	True	AATAAA	-19	NA	99508106	99488109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99489091_99493906_99497667_99498182_99498267_99507970
ES.31467.1	chr7	+	2692	19	FSM	ENSMUSG00000035211.10	ENSMUST00000036155.10	2731	19	37	2	37	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.08297714942322	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAATGTGTGCCAAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	99508359	99567027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99508438_99511496_99511565_99516553_99516652_99520488_99520665_99524361_99524434_99525424_99525498_99528576_99528675_99535209_99535344_99546697_99546827_99547588_99547795_99551912_99551954_99555657_99555784_99560174_99560269_99561003_99561120_99563373_99563698_99565116_99565313_99565904_99566021_99566188_99566295_99566586
ES.31468.1	chr7	-	175	1	Intergenic	novelGene_25814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTCTAGGTCA	4046	False	NA	NA	False	NA	NA	NA	99532000	99531825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99531800_99532000
ES.31469.1	chr7	+	5850	6	Intergenic	novelGene_25815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGAGTCGGTTGCGG	190	False	NA	NA	False	NA	NA	NA	99570756	99629655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99575691_99576299_99576392_99584364_99584490_99592167_99592312_99604669_99604746_99629176
ES.31469.2	chr7	+	3707	1	FSM	ENSMUSG00000108823.2	ENSMUST00000208954.2	655	1	273	-3325	273	3325	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTGAACAGATATAACAT	6443	False	NA	NA	False	NA	NA	NA	99594541	99598248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99594500_99598200
ES.31469.3	chr7	+	3553	2	Genic_Genomic	ENSMUSG00000108823.2	novel	655	1	NA	NA	273	3308	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAAACAT	6443	False	NA	NA	False	NA	NA	NA	99594541	99598231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_99597437_99597573
ES.3147.1	chr10	-	1756	7	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	14976	4	-5106	1	3prime_fragment	FALSE	canonical	3	10	junction_3	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTCATTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	76058695	76043064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282
ES.31470.1	chr7	-	7179	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	-32	0	-32	0	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTATTTCTGATCAGTC	NA	False	NA	-1	True	AGTAAA	-20	NA	99629687	99569460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31470.10	chr7	-	1094	1	Intergenic	novelGene_25816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99587529	99586435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99586400_99587500
ES.31470.11	chr7	-	6039	1	NIC	ENSMUSG00000058761.6	novel	7147	6	NA	NA	21992	-2426	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAACACCATCTTATC	NA	False	NA	NA	False	NA	NA	NA	99592949	99586910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99586900_99592900
ES.31470.2	chr7	-	4221	7	NNC	ENSMUSG00000058761.6	novel	7147	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.37638878602347	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGACTATTTCTGATCA	NA	False	NA	-4	True	AGTAAA	-17	NA	99629648	99569463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99572018_99574933_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31470.3	chr7	-	5850	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	0	1297	0	-1297	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGTAGTGTGATTTAAG	NA	False	NA	NA	False	TATAAA	-17	NA	99629655	99570757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31470.4	chr7	-	4467	4	ISM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	37422	2050	22708	-2050	3prime_fragment	FALSE	canonical	3	17	junction_1	4.78423336480244	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAACTGGCCACTGACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	99592233	99571510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165
ES.31470.5	chr7	-	4944	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	-5	2208	-5	-2208	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCCTGAGACTTGACTA	NA	False	NA	NA	False	NA	NA	NA	99629660	99571668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31470.7	chr7	-	4319	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	4	2824	4	-2824	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGAAGGCGTGGCTTATT	NA	False	NA	NA	False	AATAGA	-17	NA	99629651	99572284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31470.8	chr7	-	2977	4	ISM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	36505	4457	21791	-4457	3prime_fragment	FALSE	canonical	3	17	junction_1	4.78423336480244	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGTGTGGCTGACGCT	NA	False	NA	NA	False	NA	NA	NA	99593150	99573917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165
ES.31470.9	chr7	-	2139	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	-1	5009	-1	-5009	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACCTGTCATTTATCCA	NA	False	NA	NA	False	NA	NA	NA	99629656	99574469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ES.31471.1	chr7	-	398	1	Intergenic	novelGene_25817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCAGCGTCTTTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	99726468	99726070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99726100_99726500
ES.31472.1	chr7	-	2874	12	NNC	ENSMUSG00000030726.17	novel	1329	10	NA	NA	-20	4108	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	176.869377958719	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTTGGAGGAATCCAT	NA	False	NA	NA	False	AATAAA	-42	NA	99770693	99727209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99728838_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.10	chr7	-	3040	13	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	226.395349260241	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770692	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745406_99745455_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.11	chr7	-	2695	9	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-19	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	205.790207189263	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGTGCGAGTTGGAG	NA	False	NA	-5	True	AATAAA	-17	NA	99770692	99731318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.13	chr7	-	3051	12	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	174.47858567602	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGTGCGAGTTGGAG	NA	False	NA	-5	True	AATAAA	-17	NA	99770733	99731318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770548
ES.31472.17	chr7	-	2895	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	264.300824099802	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGTGCGAGTTGGA	NA	False	NA	-6	True	AATAAA	-16	NA	99770657	99731319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768216_99768320_99768880_99768937_99770570
ES.31472.2	chr7	-	3034	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	40	-5	40	5	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCGAGTTGGAGTTGTAT	NA	False	NA	1	True	AATAAA	-23	NA	99770732	99731312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.21	chr7	-	3112	13	NNC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	252.945426700877	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGTGCGAGTTGGA	NA	False	NA	-6	True	AATAAA	-16	NA	99770692	99731319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768216_99768320_99768880_99768937_99770548
ES.31472.22	chr7	-	4282	10	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	176	-2	intron_retention	FALSE	canonical	1	1	junction_7	186.874553552462	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGTGCGAGTTGGA	NA	False	NA	-6	True	AATAAA	-16	NA	99770486	99731319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99757718_99757759_99761476_99761580_99768880
ES.31472.23	chr7	-	3014	13	NNC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	223.707584434085	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGTGCGAGTTGGA	NA	False	NA	-6	True	AATAAA	-16	NA	99770692	99731319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99769103_99769131_99770570
ES.31472.27	chr7	-	9503	10	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-29	-3	intron_retention	FALSE	canonical	3	561	junction_4	32.829526005987	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGGTGCGAGTTGG	NA	False	NA	-7	True	AATAAA	-15	NA	99770702	99731320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.29	chr7	-	1793	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	63	1213	-36	69	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGGGAGGCAGTGTTTT	NA	False	NA	76	True	NA	NA	NA	99770709	99732530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.3	chr7	-	2807	11	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	223.989307780528	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770640	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.30	chr7	-	1659	11	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-35	-8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	178.454924280615	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGAATTCATTCAAGAA	NA	False	NA	-1	True	TATAAA	-26	NA	99770708	99732607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99770570
ES.31472.31	chr7	-	1721	12	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-19	-8	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	174.47858567602	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGAATTCATTCAAGAA	NA	False	NA	-1	True	TATAAA	-26	NA	99770692	99732607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770548
ES.31472.32	chr7	-	1818	13	NNC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	252.228897366393	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGAATTCATTCAAGAA	NA	False	NA	-1	True	TATAAA	-26	NA	99770692	99732607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738639_99738756_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.34	chr7	-	3017	11	NIC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	-35	7	intron_retention	FALSE	canonical	0	0	junction_4	241.927861148732	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGGAGAATTCATTCAAG	NA	False	NA	-3	True	TATAAA	-24	NA	99770708	99732609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99769103
ES.31472.35	chr7	-	1717	13	NNC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	226.395349260241	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCCTAGGAGAATTCA	NA	False	NA	-9	True	TATAAA	-18	NA	99770667	99732615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745406_99745455_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.36	chr7	-	9383	2	ISM	ENSMUSG00000030726.17	ENSMUST00000208184.2	1329	10	26777	-4711	-637	0	intron_retention	FALSE	canonical	3	601	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGCCTAGGAGAATTC	NA	False	NA	-10	True	TATAAA	-17	NA	99743508	99732616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99737350_99738858
ES.31472.37	chr7	-	3173	4	FSM	ENSMUSG00000030726.17	ENSMUST00000130413.8	748	4	-2256	-169	-2256	-3	multi-exon	FALSE	canonical	3	528	junction_3	29.9592315581618	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCCCTGCCTAGGAGA	NA	False	NA	-14	True	TATAAA	-13	NA	99745127	99732620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578
ES.31472.38	chr7	-	2378	9	NNC	ENSMUSG00000030726.17	novel	607	6	NA	NA	8	1525	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	205.13650181038	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAATGTAGTCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	99770654	99743990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99745455_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.39	chr7	-	2732	6	ISM	ENSMUSG00000030726.17	ENSMUST00000208670.2	1716	13	-27	15752	-27	-186	intron_retention	FALSE	canonical	3	561	junction_1	39.2754376169127	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTGGAGTTACACT	NA	False	NA	NA	False	ATTAAA	-14	NA	99770700	99748369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880
ES.31472.4	chr7	-	5881	11	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-20	0	intron_retention	FALSE	canonical	3	528	junction_3	39.5646306693238	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770693	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31472.5	chr7	-	2950	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	173.004657654781	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770661	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761572_99768880_99768937_99770570
ES.31472.7	chr7	-	4456	12	ISM	ENSMUSG00000030726.17	ENSMUST00000208670.2	1716	13	-19	-1300	-19	0	intron_retention	FALSE	canonical	3	5	junction_11	174.755460785579	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770692	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99769103
ES.31472.8	chr7	-	4639	11	ISM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	64	0	-35	0	intron_retention	FALSE	canonical	3	502	junction_4	49.2833643332109	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770708	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880
ES.31472.9	chr7	-	2983	12	NNC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	176.901803082626	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770706	99731317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745599_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ES.31473.1	chr7	+	1645	3	NNC	ENSMUSG00000030725.5	novel	1663	2	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTCGCCTCAATTCA	NA	False	NA	4	True	NA	NA	NA	99808438	99810572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99808955_99809380_99809667_99809729
ES.31473.2	chr7	+	1189	3	NNC	ENSMUSG00000030725.5	novel	1663	2	NA	NA	-21	279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTCTCAAGTTTGATA	NA	False	NA	NA	False	AATAAA	-26	NA	99808462	99810140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99808955_99809380_99809667_99809729
ES.31473.3	chr7	+	2964	3	NNC	ENSMUSG00000030725.5	novel	1663	2	NA	NA	-17	1347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGGGTCATGGTGTT	NA	False	NA	NA	False	NA	NA	NA	99808466	99811919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99808955_99809380_99809667_99809729
ES.31473.4	chr7	+	1568	3	NNC	ENSMUSG00000030725.5	novel	1663	2	NA	NA	34	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	41	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTCGCCTCAATTCAT	NA	False	NA	5	True	NA	NA	NA	99808517	99810573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99808955_99809380_99809685_99809746
ES.31473.5	chr7	+	2914	3	NNC	ENSMUSG00000030725.5	novel	1663	2	NA	NA	35	1348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	41	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGGGTCATGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	99808518	99811920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99808955_99809380_99809685_99809746
ES.31474.1	chr7	-	157	1	Intergenic	novelGene_25818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7724	False	NA	NA	False	NA	NA	NA	99815679	99815522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_99815500_99815700
ES.31475.1	chr7	+	2487	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	165	6182	-117	-4724	multi-exon	TRUE	canonical	2	3	junction_8	2.32557176274323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTACAAAAGTGAGTT	NA	False	NA	NA	False	AATGAA	-36	NA	99876765	99921892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
ES.31475.2	chr7	+	5665	1	NIC	ENSMUSG00000030729.18	novel	8834	14	NA	NA	-87	-23112	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	99876795	99882460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_99876800_99882500
ES.31475.3	chr7	+	3839	15	NNC	ENSMUSG00000030729.18	novel	4060	15	NA	NA	-45	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	2.91372543633873	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGTGTCTATGCACTT	NA	False	NA	16	True	AATAAA	-16	NA	99876837	99928076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533_99921605_99926364
ES.31475.4	chr7	+	5834	1	Genic_Genomic	ENSMUSG00000030729.18	novel	NA	NA	NA	NA	45331	6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTATGCACTTTTTAT	6457	False	NA	21	True	AATAAA	-21	NA	99922247	99928081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_99922200_99928100
ES.31475.5	chr7	+	1397	1	ISM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	45665	4412	45349	-2954	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGTGTCTGTGTCTC	6475	False	NA	NA	False	TATAAA	-16	NA	99922265	99923662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_99922300_99923700
ES.31476.1	chr7	+	173	1	Intergenic	novelGene_25819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	99979688	99979861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99979700_99979900
ES.31477.1	chr7	+	156	1	Intergenic	novelGene_25820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTTT	5809	False	NA	NA	False	NA	NA	NA	99985572	99985728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99985600_99985700
ES.31478.1	chr7	+	171	1	Intergenic	novelGene_25821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7221	False	NA	NA	False	NA	NA	NA	99986984	99987155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_99987000_99987200
ES.31479.1	chr7	+	2956	1	Antisense	novelGene_ENSMUSG00000030718.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCACATGGGGGAGAAAC	8105	False	NA	NA	False	NA	NA	NA	100014270	100017226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_100014300_100017200
ES.3148.1	chr10	+	1356	1	NIC	ENSMUSG00000033208.8	novel	1484	3	NA	NA	4889	-1062	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGAGCTGTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	76094575	76095931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76094600_76095900
ES.31480.10	chr7	-	2544	16	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	156.362740659873	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021137	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100016736_100016808_100019146_100019226_100020929
ES.31480.14	chr7	-	2476	15	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_14	139.641468754516	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021140	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100019146_100019226_100020929
ES.31480.2	chr7	-	2481	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	105	junction_12	74.9147049500395	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021224	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.20	chr7	-	2859	13	NIC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	4	-2	intron_retention	FALSE	canonical	3	340	junction_6	24.5554927098241	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTGAGGAGCTGTC	NA	False	NA	-10	True	AATAAA	-15	NA	100021137	99975945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004569_100020929
ES.31480.21	chr7	-	2484	15	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	1	6	junction_8	138.67663531999	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTGAGGAGCTGT	NA	False	NA	-11	True	AATAAA	-14	NA	100021130	99975946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99991797_99991897_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.22	chr7	-	2360	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	120.049891009367	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTCTGAGGAGCTGT	NA	False	NA	-11	True	AATAAA	-14	NA	100021109	99975946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987705_99990245_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.23	chr7	-	2767	16	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-47	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	165.751701851494	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGTCTGAGGAGCTG	NA	False	NA	-12	True	AATAAA	-13	NA	100021188	99975947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99990609_99990792_99991052_99991144_99992935_99993079_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.24	chr7	-	2535	15	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.595720298765	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGTCTGAGGAGCTG	NA	False	NA	-12	True	AATAAA	-13	NA	100021140	99975947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99992935_99993079_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004007_100004474_100004569_100020929
ES.31480.25	chr7	-	3816	1	NIC	ENSMUSG00000030718.10	novel	673	6	NA	NA	4722	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGTCTGAGGAGCTG	1	True	NA	-12	True	AATAAA	-13	NA	99979763	99975947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_99975900_99979800
ES.31480.26	chr7	-	5466	12	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	7	-6	intron_retention	FALSE	non_canonical	1	105	junction_10	80.3017038198047	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATTTGTCTGAGGAGC	NA	False	NA	-14	True	AATAAA	-11	NA	100021134	99975949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.4	chr7	-	3505	13	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-32	-1	intron_retention	FALSE	canonical	0	0	junction_11	105.495128902818	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021173	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004007_100004472_100004569_100020929
ES.31480.5	chr7	-	2437	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.852195962999	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021179	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004012_100004476_100004569_100020929
ES.31480.6	chr7	-	989	2	NNC	ENSMUSG00000030718.10	novel	942	5	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021170	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99976865_100021101
ES.31480.7	chr7	-	2359	14	NNC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	118.998284508544	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	100021140	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978272_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004008_100004473_100004569_100020929
ES.31480.9	chr7	-	5507	5	NNC	ENSMUSG00000030718.10	novel	942	5	NA	NA	-3081	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	162.916197782786	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGAGGAGCTGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	99987566	99975944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99986987_99987189
ES.31481.1	chr7	+	400	2	ISM	ENSMUSG00000047248.21	ENSMUST00000156559.8	1909	10	-71	32816	-23	-32816	5prime_fragment	FALSE	canonical	3	38	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTACTTGTCCGAGT	NA	False	NA	NA	False	NA	NA	NA	100021416	100023583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100021704_100023470
ES.31481.10	chr7	+	7623	33	NIC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	76	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.9968745115661	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACAAGTGTTTTTT	NA	False	NA	22	True	AATAAA	-16	NA	100021563	100119359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100029232_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.12	chr7	+	6678	31	NIC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	78	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	10.4514220191428	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACAAGTGTTTTTT	NA	False	NA	22	True	AATAAA	-16	NA	100021565	100119359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100118585
ES.31481.13	chr7	+	7471	32	NIC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	78	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	12.597672513506	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTACAAGTGTTTT	NA	False	NA	20	True	AATAAA	-14	NA	100021565	100119357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100029232_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.15	chr7	+	7513	32	NIC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	84	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10.1271829008251	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTACAAGTGTTTT	NA	False	NA	20	True	AATAAA	-14	NA	100021571	100119357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.17	chr7	+	6302	26	NIC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	10.3795182932543	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACAAGTGTTTTTT	NA	False	NA	22	True	AATAAA	-16	NA	100045015	100119359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.18	chr7	+	6421	26	ISM	ENSMUSG00000047248.21	ENSMUST00000051777.15	7803	33	27432	-2	2634	0	3prime_fragment	FALSE	canonical	3	28	junction_8	6.08604962188118	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTACAAGTGTTTTTT	NA	False	NA	22	True	AATAAA	-16	NA	100048871	100119359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.19	chr7	+	3712	1	FSM	ENSMUSG00000047248.21	ENSMUST00000184753.2	2576	1	-3202	2066	-3202	-2066	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAGGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	100066509	100070221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100066500_100070200
ES.31481.2	chr7	+	7811	33	FSM	ENSMUSG00000047248.21	ENSMUST00000051777.15	7803	33	1	-9	1	7	multi-exon	TRUE	canonical	3	28	junction_15	6.6496446098645	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGTTTTTTGGGTTGG	NA	False	NA	29	True	AATAAA	-23	NA	100021440	100119366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.21	chr7	+	1031	1	FSM	ENSMUSG00000102241.2	ENSMUST00000193553.2	947	1	-752	668	-752	-668	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACAGCACCAC	6604	False	NA	NA	False	NA	NA	NA	100106914	100107945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100106900_100107900
ES.31481.3	chr7	+	1936	1	NIC	ENSMUSG00000047248.21	novel	6602	32	NA	NA	-1	-33012	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100021451	100023387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021500_100023400
ES.31481.4	chr7	+	7534	32	NNC	ENSMUSG00000047248.21	novel	7803	33	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	15.0521120445977	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTGTACAAGTGTT	NA	False	NA	18	True	AATAAA	-12	NA	100021456	100119355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081176_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100878_100100997_100103809_100104699_100108983_100109096_100118585
ES.31481.6	chr7	+	1961	10	ISM	ENSMUSG00000047248.21	ENSMUST00000098259.11	6602	32	54	62269	6	0	5prime_fragment	FALSE	canonical	3	36	junction_4	7.5832824581118	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAGGGTAAATTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	100021493	100056399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068
ES.31481.7	chr7	+	3019	13	NNC	ENSMUSG00000047248.21	novel	4167	18	NA	NA	58	922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.8620240660412	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGGATGTGTTTGGCA	NA	False	NA	NA	False	AAAAAG	-18	NA	100021545	100066486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100021704_100023470_100023741_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100066318_100066366
ES.31481.8	chr7	+	2424	14	NIC	ENSMUSG00000047248.21	novel	4167	18	NA	NA	75	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	13.619078160464	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGAAAGCGGTTTGC	NA	False	NA	NA	False	AATAAA	-7	NA	100021562	100065557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062536_100062656_100065255
ES.31481.9	chr7	+	6056	31	NIC	ENSMUSG00000047248.21	novel	6602	32	NA	NA	75	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	10.0357140032763	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCTGTGAACATAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100021562	100103646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103497
ES.31482.1	chr7	-	3532	1	Antisense	novelGene_ENSMUSG00000047248.21_AS_novelGene_ENSMUSG00000109046.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTAAATGTATTTGGC	NA	False	NA	NA	False	NA	NA	NA	100032015	100028483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_100028500_100032000
ES.31483.1	chr7	+	1723	3	ISM	ENSMUSG00000032942.15	ENSMUST00000032958.14	2448	7	8878	1	8875	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGTGGTTTGAATGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	100131075	100135638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100131180_100131781_100131963_100134200
ES.31484.1	chr7	+	4461	7	NIC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	-515	326	intron_retention	TRUE	canonical	3	366	junction_1	57.5724181647196	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTTTCTCATATGTTT	NA	False	NA	16	True	CATAAA	-18	NA	100142028	100148835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100142673_100143420_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.10	chr7	+	2499	4	NIC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	301	327	intron_retention	FALSE	canonical	3	402	junction_1	55.7155474012615	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTCTCATATGTTTA	NA	False	NA	17	True	CATAAA	-19	NA	100145586	100148836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100146156_100146301_100147657_100147942_100148124_100148442
ES.31484.11	chr7	+	1397	7	NNC	ENSMUSG00000033685.14	novel	464	4	NA	NA	468	327	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	172.435897912496	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTCTCATATGTTTA	NA	False	NA	17	True	CATAAA	-19	NA	100145753	100148836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100145845_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.2	chr7	+	1568	8	NNC	ENSMUSG00000033685.14	novel	464	4	NA	NA	-365	323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.328814222197	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142178	100148832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100142283_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.3	chr7	+	1422	7	NIC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	-24	323	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	173.079622011245	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142519	100148832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147554_100147657_100147942_100148124_100148442
ES.31484.4	chr7	+	1630	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	-22	2380	-22	338	multi-exon	FALSE	canonical	3	366	junction_1	56.4938140012529	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTACAGAGGTCTTG	NA	False	NA	28	True	CATAAA	-30	NA	100142521	100148847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.5	chr7	+	1477	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	6	2505	6	213	multi-exon	FALSE	canonical	3	366	junction_1	56.4938140012529	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGAGCCCTCAGCCCT	NA	False	NA	-97	True	NA	NA	NA	100142549	100148722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.6	chr7	+	1741	8	NIC	ENSMUSG00000033685.14	novel	3988	8	NA	NA	2	323	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	152.568352028906	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100142562	100148832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147775_100148124_100148442
ES.31484.7	chr7	+	1976	7	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	367	2393	-91	325	3prime_fragment	FALSE	canonical	3	391	junction_1	52.4139506450546	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTCTCATATGTT	NA	False	NA	15	True	CATAAA	-17	NA	100142910	100148834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.8	chr7	+	1524	8	NIC	ENSMUSG00000033685.14	novel	670	4	NA	NA	-116	323	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	162.324064885082	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100143157	100148832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100143218_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31484.9	chr7	+	1491	7	NIC	ENSMUSG00000033685.14	novel	742	4	NA	NA	-60	323	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	173.154795871594	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCTTTCTCATATG	NA	False	NA	13	True	CATAAA	-15	NA	100145225	100148832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100145415_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ES.31485.1	chr7	-	2232	1	Intergenic	novelGene_25822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGGTTCAGTTTGCAG	NA	False	NA	NA	False	NA	NA	NA	100142225	100139993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100140000_100142200
ES.31485.2	chr7	-	166	1	Intergenic	novelGene_25823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTCGGAGCGAGTGGAG	NA	False	NA	NA	False	NA	NA	NA	100141098	100140932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100140900_100141100
ES.31486.1	chr7	-	2107	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3002	-1365	-13	0	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTACTGTGCCATACACA	NA	False	NA	NA	False	NA	NA	NA	100161001	100150922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
ES.31486.2	chr7	-	984	7	ISM	ENSMUSG00000030708.15	ENSMUST00000130534.8	1159	8	1595	-14	-23	14	3prime_fragment	FALSE	canonical	3	16	junction_5	19.1020650425259	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGTTGGAGGGATGCT	NA	False	NA	5	True	AATAAA	-27	NA	100161011	100152213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956
ES.31486.3	chr7	-	837	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	2969	-62	-46	2	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATGATGGGAAGTGAGT	NA	False	NA	-7	True	AATAAA	-15	NA	100161034	100152225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
ES.31486.4	chr7	-	765	6	NNC	ENSMUSG00000030708.15	novel	905	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.1611258015847	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCTATGATGGGAAGTG	NA	False	NA	-10	True	AATAAA	-12	NA	100161001	100152228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155367_100159901_100160064_100160956
ES.31487.1	chr7	+	902	3	Genic_Genomic	ENSMUSG00000109560.2	novel	613	1	NA	NA	-12152	38	multi-exon	TRUE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	1747	False	NA	NA	False	AATAAA	-16	NA	100161070	100173873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_100161188_100161741_100161861_100173207
ES.31488.1	chr7	+	1910	1	Intergenic	novelGene_25824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACAAAATGTACTC	3679	False	NA	NA	False	AATAAA	-7	NA	100176135	100178045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100176100_100178000
ES.31489.1	chr7	-	174	1	Intergenic	novelGene_25825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTTACTTACAT	NA	False	NA	NA	False	NA	NA	NA	100178615	100178441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100178400_100178600
ES.3149.1	chr10	-	6730	38	NNC	ENSMUSG00000020231.16	novel	6322	38	NA	NA	-64	-2	intron_retention	TRUE	non_canonical	0	0	junction_30	8.56897422163838	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACATTCTTTACATGT	NA	False	NA	NA	False	AATAAA	-23	NA	76181189	76098571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138126_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ES.3149.10	chr10	-	4420	19	NNC	ENSMUSG00000020231.16	novel	6551	37	NA	NA	-398	2	intron_retention	FALSE	non_canonical	0	0	junction_18	10.286182749473	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCATTTTGAAATGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	76122053	76098882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121762_76121801
ES.3149.14	chr10	-	6366	37	NNC	ENSMUSG00000020231.16	novel	6551	37	NA	NA	-38	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	10.4631923934203	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTGCATTTTGAAATG	NA	False	NA	-15	True	AATAAA	-15	NA	76181163	76098885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106385_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138126_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76163535_76163608_76180940
ES.3149.15	chr10	-	5113	38	NNC	ENSMUSG00000020231.16	novel	6322	38	NA	NA	8	389	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	8.56897422163838	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCCACTTGTAATAACA	NA	False	NA	NA	False	AATATA	-19	NA	76181117	76100116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138126_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ES.3149.16	chr10	-	5000	37	NNC	ENSMUSG00000020231.16	novel	6551	37	NA	NA	-12	369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	9.32981911353902	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAATTTCCTGATTATT	NA	False	NA	NA	False	AAGAAA	-21	NA	76181137	76100136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76163535_76163608_76180940
ES.3149.2	chr10	-	4349	2	ISM	ENSMUSG00000020231.16	ENSMUST00000159486.2	810	6	2600	-1673	-2463	35	intron_retention	FALSE	canonical	3	42	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATTTTATTACGCATT	7154	False	NA	38	True	TTTAAA	-16	NA	76103805	76098832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76100708_76101331
ES.3149.4	chr10	-	6256	37	NNC	ENSMUSG00000020231.16	novel	6551	37	NA	NA	-19	2	intron_retention	FALSE	non_canonical	0	0	junction_30	9.32981911353902	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCATTTTGAAATGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	76181144	76098882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140850_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76163535_76163608_76180940
ES.3149.5	chr10	-	6415	38	NNC	ENSMUSG00000020231.16	novel	6322	38	NA	NA	-60	2	intron_retention	FALSE	non_canonical	0	0	junction_30	8.56897422163838	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCATTTTGAAATGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	76181185	76098882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138126_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ES.3149.7	chr10	-	6680	39	NNC	ENSMUSG00000020231.16	novel	6322	38	NA	NA	-38	2	intron_retention	FALSE	non_canonical	0	0	junction_18	11.512879695887	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCATTTTGAAATGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	76181163	76098882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121630_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135509_76135655_76135736_76135848_76138037_76138126_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ES.31490.1	chr7	-	177	1	Intergenic	novelGene_25826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100178939	100178762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100178800_100178900
ES.31491.1	chr7	-	171	1	Intergenic	novelGene_25827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	100179497	100179326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100179300_100179500
ES.31492.1	chr7	+	862	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	-29	558	0	32	multi-exon	FALSE	canonical	3	255	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGTGCCTCTATCTTT	7542	False	NA	28	True	AATAAA	-37	NA	100186277	100189018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186400_100188278
ES.31492.2	chr7	+	910	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	-134	-34	-2	34	multi-exon	FALSE	canonical	2	17	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGCCTCTATCTTTCC	7569	False	NA	30	True	AATAAA	-39	NA	100186304	100189020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186473_100188278
ES.31492.3	chr7	+	1396	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	-5	0	5	multi-exon	FALSE	canonical	3	255	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGCTTCTCATTTTTA	7571	False	NA	NA	False	NA	NA	NA	100186306	100189581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186400_100188278
ES.31492.4	chr7	+	2068	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	-677	0	677	multi-exon	FALSE	canonical	3	255	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGAGTCAGTTGAGTG	7571	False	NA	NA	False	AATAAA	-15	NA	100186306	100190253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186400_100188278
ES.31492.5	chr7	+	1154	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	1	236	1	-236	multi-exon	FALSE	canonical	3	255	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCACTATCAACACAGAGC	7572	False	NA	NA	False	ATTAAA	-28	NA	100186307	100189340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186400_100188278
ES.31492.6	chr7	+	2358	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	10	-977	10	977	multi-exon	FALSE	canonical	3	255	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACATAGGAAAATGGAA	7581	False	NA	NA	False	AATATA	-4	NA	100186316	100190553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100186400_100188278
ES.31493.1	chr7	+	161	1	Intergenic	novelGene_25828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAATTTAA	3218	False	NA	NA	False	NA	NA	NA	100238338	100238499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100238300_100238500
ES.31494.1	chr7	+	3409	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	-299	0	-19	0	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256597	100290475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.10	chr7	+	3067	8	NNC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	245.357381991982	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256919	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283929_100285901_100285969_100288461
ES.31494.11	chr7	+	5873	7	NIC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	26	-2	intron_retention	FALSE	canonical	3	254	junction_3	205.6888156631	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	9	True	AATAAA	-17	NA	100256922	100290473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100283946_100285901_100285969_100288461
ES.31494.12	chr7	+	3173	9	NNC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	293.540004726783	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256922	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100271626_100271719_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.13	chr7	+	3187	9	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	254.847871287951	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGGTTCACATTCTTTAT	NA	False	NA	10	True	AATAAA	-18	NA	100256924	100290474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.14	chr7	+	4230	7	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	32	266	intron_retention	FALSE	canonical	3	462	junction_3	108.387294253319	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCAGCAGTATGTGT	NA	False	NA	3	True	NA	NA	NA	100256928	100288836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100283946_100285901_100285969_100288461
ES.31494.15	chr7	+	9043	5	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	33	-3	intron_retention	FALSE	canonical	3	628	junction_1	39.1599284984026	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256929	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100283946_100285901_100285969_100288461
ES.31494.16	chr7	+	7162	6	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	46	-73	intron_retention	FALSE	canonical	3	477	junction_3	91.7487874579277	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGGATTGACTCTT	NA	False	NA	1	True	AATACA	-11	NA	100256942	100290402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100279151_100280948_100283946_100285901_100285969_100288461
ES.31494.17	chr7	+	3224	8	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	51	-7	combination_of_known_junctions	FALSE	canonical	3	254	junction_3	168.031338185009	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCACACGGTTCACATT	NA	False	NA	4	True	AATAAA	-12	NA	100256947	100290468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.18	chr7	+	2303	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	51	756	51	-756	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTTATGCCTTATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	100256947	100289719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.19	chr7	+	7816	6	NIC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	52	-3	intron_retention	FALSE	canonical	3	254	junction_3	177.490281424082	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256948	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100283946_100285901_100285969_100288461
ES.31494.2	chr7	+	3393	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	-163	-16	13	16	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAGGACTTGTGATT	NA	False	NA	27	True	AATAAA	-35	NA	100256629	100290491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.20	chr7	+	2661	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	53	396	53	-396	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTTCTAGCTCAGAA	NA	False	NA	NA	False	AATAAA	-35	NA	100256949	100290079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.21	chr7	+	5840	7	NIC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	59	-2	intron_retention	FALSE	canonical	3	462	junction_3	108.387294253319	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	NA	False	NA	9	True	AATAAA	-17	NA	100256955	100290473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100283946_100285901_100285969_100288461
ES.31494.22	chr7	+	3064	8	NNC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	278.437476952059	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256964	100290475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285879_100285969_100288461
ES.31494.26	chr7	+	3046	8	NNC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	83	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	245.357381991982	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256979	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285879_100285969_100288461
ES.31494.27	chr7	+	3658	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	187	-631	83	631	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATATTACTATCTTACT	NA	False	NA	NA	False	AATAAA	-1	NA	100256979	100291106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.28	chr7	+	2613	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	189	412	85	-412	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGCAGGAAAAAAATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	100256981	100290063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.29	chr7	+	1386	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	93	1631	93	274	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTATGTGTGTGGCTTG	NA	False	NA	11	True	NA	NA	NA	100256989	100288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.3	chr7	+	3357	8	NNC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	272.823258928276	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256642	100290475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100275758_100275818_100277617_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.30	chr7	+	1390	9	NNC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	226	274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	310.709646414462	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTATGTGTGTGGCTTG	NA	False	NA	11	True	NA	NA	NA	100257122	100288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100259763_100259901_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.31	chr7	+	158	1	Intergenic	novelGene_25829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	645	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	2976	False	NA	NA	False	NA	NA	NA	100267632	100267790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100267600_100267800
ES.31494.32	chr7	+	2504	7	ISM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	18965	3	-7797	-3	3prime_fragment	FALSE	canonical	3	462	junction_2	121.089039782945	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100275757	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.33	chr7	+	6357	2	NIC	ENSMUSG00000030704.15	novel	567	3	NA	NA	-1931	-2	intron_retention	FALSE	canonical	3	699	junction_1	0	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGTTCACATTCTTTA	4974	False	NA	9	True	AATAAA	-17	NA	100281623	100290473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100285969_100288461
ES.31494.34	chr7	+	2638	4	NNC	ENSMUSG00000030704.15	novel	567	3	NA	NA	-1476	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	327.874298406501	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAAGGATTGACTCTT	5429	False	NA	1	True	AATACA	-11	NA	100282078	100290402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100282615_100283851_100283946_100285901_100285969_100288461
ES.31494.4	chr7	+	2568	8	NIC	ENSMUSG00000030704.15	novel	2617	8	NA	NA	46	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	249.71575677893	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACGGTTCACATTCTTT	NA	False	NA	8	True	AATAAA	-16	NA	100256662	100290472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100256728_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.5	chr7	+	3334	9	NNC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	282.701891353772	704	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGGTTCACATTCTTTAT	NA	False	NA	10	True	AATAAA	-18	NA	100256739	100290474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100282546_100282615_100283851_100283946_100285901_100285969_100288461
ES.31494.6	chr7	+	3481	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	108	-375	4	375	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTCAGAATTCTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	100256900	100290850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.7	chr7	+	3474	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	8	-372	8	372	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAAGTCAGAATTCT	NA	False	NA	NA	False	AATAAA	-26	NA	100256904	100290847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.8	chr7	+	1463	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	120	1631	16	274	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTATGTGTGTGGCTTG	NA	False	NA	11	True	NA	NA	NA	100256912	100288844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ES.31494.9	chr7	+	5073	7	NIC	ENSMUSG00000030704.15	novel	3110	8	NA	NA	16	9	intron_retention	FALSE	canonical	3	254	junction_3	172.266669891641	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTATTTGAAGGACT	NA	False	NA	20	True	AATAAA	-28	NA	100256912	100290484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100281061_100283851_100283946_100285901_100285969_100288461
ES.31495.1	chr7	-	4292	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-6	-1	2	1	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTGCTTGAGTGGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	100232315	100194956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31495.10	chr7	-	2201	1	FSM	ENSMUSG00000030706.18	ENSMUST00000208916.2	2144	1	-26	-31	1	31	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	100232308	100230107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100230100_100232300
ES.31495.2	chr7	-	3998	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-6	293	2	-288	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATCTGTTCACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	100232315	100195250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31495.3	chr7	-	2563	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	29	1693	2	1265	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCAGATACTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	100232280	100196650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31495.4	chr7	-	1059	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-2	3228	-2	258	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTTTTAGAGTGAATT	NA	False	NA	NA	False	NA	NA	NA	100232311	100198185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31495.5	chr7	-	974	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-55	3366	-47	120	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	100232364	100198323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31495.6	chr7	-	932	7	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	33	116	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	181.909699820787	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	100240600	100198327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100240417
ES.31495.7	chr7	-	982	7	NIC	ENSMUSG00000030706.18	novel	834	7	NA	NA	1	116	combination_of_known_junctions	TRUE	canonical	1	4	junction_5	223.502982828716	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	100232281	100198327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214635_100220458_100220497_100232196
ES.31495.8	chr7	-	915	8	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	-32	116	combination_of_known_junctions	FALSE	canonical	1	13	junction_7	166.611487464406	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	100256877	100198327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100256764
ES.31495.9	chr7	-	735	7	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	4	115	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	171.486070052999	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGTGTGTGTTTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	100232300	100198328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ES.31496.1	chr7	-	208	1	Intergenic	novelGene_25830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTAATGGCTTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	100269914	100269706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100269700_100269900
ES.31497.1	chr7	-	151	1	Intergenic	novelGene_25831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	100282146	100281995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100282000_100282100
ES.31498.1	chr7	-	1797	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	11	-2	11	0	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTTGCTTGTTTTG	NA	False	NA	0	True	AATAAA	-18	NA	100307652	100293104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
ES.31498.2	chr7	-	1751	7	NIC	ENSMUSG00000030701.18	novel	1926	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	7.80313327381308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTTGCTTGTTTTG	NA	False	NA	0	True	AATAAA	-18	NA	100307616	100293104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307509
ES.31498.3	chr7	-	2232	8	FSM	ENSMUSG00000030701.18	ENSMUST00000107047.10	1926	8	-308	2	-259	0	multi-exon	FALSE	canonical	1	1	junction_7	8.07869458034211	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGCTTTGCTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	100311880	100293106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100311125_100311200_100311364
ES.31498.4	chr7	-	1477	5	ISM	ENSMUSG00000030701.18	ENSMUST00000107045.9	1919	7	2317	2	-872	0	3prime_fragment	FALSE	canonical	1	2	junction_3	9.28708781050335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGCTTTGCTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	100303870	100293106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100294277_100294776_100294877_100299134_100299240_100302860_100302901_100303808
ES.31499.1	chr7	-	182	1	Intergenic	novelGene_25832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAATTACTT	NA	False	NA	NA	False	NA	NA	NA	100333149	100332967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100333000_100333100
ES.315.1	chr1	+	2291	5	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	6	0	6	0	intron_retention	FALSE	canonical	3	315	junction_1	77.3413699128739	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469225	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457
ES.315.11	chr1	+	7701	3	NNC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	157.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469265	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37469364_37470373_37473934_37474022
ES.315.2	chr1	+	1088	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	6	0	6	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469225	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ES.315.3	chr1	+	1264	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	11	139	4	1	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTGTTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	37469261	37478066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ES.315.4	chr1	+	2056	5	NIC	ENSMUSG00000026111.16	novel	1414	6	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	468	junction_2	24.0455297300766	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGCTGTGACTGTT	NA	False	NA	NA	False	AATAAA	-8	NA	37469262	37478060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ES.315.5	chr1	+	5666	6	NNC	ENSMUSG00000026111.16	novel	1414	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.801216086345	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469262	37478068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37469575_37470373_37470658_37471631_37473934_37474022_37476383_37476457_37476560_37477762
ES.315.6	chr1	+	1106	6	NIC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469262	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ES.315.7	chr1	+	6730	4	NNC	ENSMUSG00000026111.16	novel	1094	6	NA	NA	-4	0	intron_retention	TRUE	canonical	0	0	junction_3	200.92840073574	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469262	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37469364_37470373_37470658_37471631_37473934_37474022
ES.315.9	chr1	+	2326	4	ISM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	46	0	-1	0	intron_retention	FALSE	canonical	3	315	junction_1	76.4475128583149	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469265	37478065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242
ES.3150.1	chr10	+	1996	1	Intergenic	novelGene_2475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACTTTAGGGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	76250117	76252113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76250100_76252100
ES.31500.1	chr7	+	6704	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-147	-2480	-62	6	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTCTTGGGTGAGGGA	NA	False	NA	NA	False	AAGAAA	-41	NA	100355779	100490869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.10	chr7	+	5427	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-30	-1320	6	-879	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	100355896	100489709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.11	chr7	+	3644	1	Intergenic	novelGene_25835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCAGGGTGCCTTTGGA	4937	False	NA	NA	False	NA	NA	NA	100377343	100380987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100377300_100381000
ES.31500.12	chr7	+	180	1	Intergenic	novelGene_25837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGTAGCTGAAATT	NA	False	NA	NA	False	NA	NA	NA	100413584	100413764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100413600_100413800
ES.31500.13	chr7	+	177	1	Intergenic	novelGene_25839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAAATAAAT	5325	False	NA	NA	False	NA	NA	NA	100478345	100478522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100478300_100478500
ES.31500.2	chr7	+	6469	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-136	-2256	-51	57	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGCCCTGTGGCCACG	NA	False	NA	NA	False	AATACA	-18	NA	100355790	100490645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.3	chr7	+	6660	9	FSM	ENSMUSG00000029461.18	ENSMUST00000107042.9	6388	9	-25	-247	-25	-28	multi-exon	FALSE	canonical	0	0	junction_3	17.2699160391705	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	ATTAAA	-12	NA	100355816	100490835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100467942_100467970_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.4	chr7	+	4678	9	NNC	ENSMUSG00000029461.18	novel	6609	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	13.3486890742125	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACGTGTGTCTTGGGT	NA	False	NA	NA	False	ATTAAA	-40	NA	100355816	100490863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230_100487916_100489898
ES.31500.5	chr7	+	6127	7	NIC	ENSMUSG00000029461.18	novel	4077	8	NA	NA	23	-68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.9182960004002	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAAAAACATTT	NA	False	NA	NA	False	TTTAAA	-22	NA	100355864	100490520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100483215_100483391_100484533_100484665_100485230
ES.31500.6	chr7	+	6625	9	FSM	ENSMUSG00000029461.18	ENSMUST00000049053.9	6609	9	-44	28	23	-28	multi-exon	FALSE	canonical	0	0	junction_2	16.4829457318769	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	ATTAAA	-12	NA	100355864	100490835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100363321_100363362_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.7	chr7	+	1006	7	NIC	ENSMUSG00000029461.18	novel	4077	8	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	14.1705876926667	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGAGCCTCCCCTCGTGC	NA	False	NA	8	True	NA	NA	NA	100355885	100485403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100356101_100436010_100436099_100462126_100462208_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.8	chr7	+	1130	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-38	2985	-2	0	multi-exon	FALSE	canonical	3	35	junction_2	3.48173074484398	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCTCCCCTCGTGCC	NA	False	NA	9	True	NA	NA	NA	100355888	100485404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31500.9	chr7	+	6351	9	FSM	ENSMUSG00000029461.18	ENSMUST00000049053.9	6609	9	-19	277	-1	-2	multi-exon	FALSE	canonical	0	0	junction_2	16.4829457318769	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGTTTGATCAAATAAT	NA	False	NA	NA	False	NA	NA	NA	100355889	100490586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100356101_100363321_100363362_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ES.31501.1	chr7	-	172	1	Intergenic	novelGene_25833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGACATTTCTGG	NA	False	NA	NA	False	NA	NA	NA	100359034	100358862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100358900_100359000
ES.31502.1	chr7	-	231	1	Intergenic	novelGene_25834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCCTCACTTTATAGAT	NA	False	NA	NA	False	NA	NA	NA	100360162	100359931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100359900_100360200
ES.31503.1	chr7	-	181	1	Intergenic	novelGene_25836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	100380235	100380054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100380100_100380200
ES.31504.1	chr7	-	182	1	Intergenic	novelGene_25838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCAGGGGGGGAAA	NA	False	NA	NA	False	NA	NA	NA	100423711	100423529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100423500_100423700
ES.31505.1	chr7	-	178	1	Intergenic	novelGene_25840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	100481673	100481495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100481500_100481700
ES.31506.1	chr7	-	2755	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	96	0	48	0	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGAGCTTTTTTTCTGT	2254	False	NA	NA	False	NA	NA	NA	100512557	100495053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.10	chr7	-	2628	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	34	-323	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2240	False	NA	-3	True	AATAAA	-15	NA	100512571	100495376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
ES.31506.11	chr7	-	2667	13	NNC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	29	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.475975572832	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATGAGGTGCTTCCTTT	2475	False	NA	-4	True	AATAAA	-14	NA	100512336	100495377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100508658_100508789_100510640_100510786_100512318
ES.31506.12	chr7	-	4051	9	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	36	-325	intron_retention	FALSE	canonical	3	27	junction_6	6.25374887567449	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCATGAGGTGCTTCCTT	2242	False	NA	-5	True	AATAAA	-13	NA	100512569	100495378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100497481_100497628_100497711_100498005_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.13	chr7	-	3859	8	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	2	-325	intron_retention	FALSE	canonical	3	27	junction_5	6.50274667242345	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCATGAGGTGCTTCCTT	2200	False	NA	-5	True	AATAAA	-13	NA	100512611	100495378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100497481_100497628_100497711_100498005_100498087_100499271_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.2	chr7	-	2616	10	NNC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	15.7840363174042	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGAGCTTTTTTTCTG	2201	False	NA	NA	False	NA	NA	NA	100512610	100495054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100496485_100496602_100496693_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.3	chr7	-	2847	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	-109	-7	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGAACGAGCTTTT	2337	False	NA	NA	False	NA	NA	NA	100512474	100495060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
ES.31506.4	chr7	-	3262	8	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	2315	-7	intron_retention	FALSE	canonical	3	27	junction_6	6.68534797531291	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGAACGAGCTTTT	9469	False	NA	NA	False	NA	NA	NA	100502321	100495060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252
ES.31506.5	chr7	-	2801	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	66	-54	intron_retention	FALSE	canonical	3	27	junction_7	6.04509800388242	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAGTATATCCAGAATA	2272	False	NA	NA	False	NA	NA	NA	100512539	100495107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.6	chr7	-	2492	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	37	322	-3	-322	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGAGGTGCTTCCTTTCC	2195	False	NA	-2	True	AATAAA	-16	NA	100512616	100495375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.7	chr7	-	2404	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	2	-323	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	13.2310894636482	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2200	False	NA	-3	True	AATAAA	-15	NA	100512611	100495376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ES.31506.8	chr7	-	3052	2	NIC	ENSMUSG00000008318.11	novel	1966	9	NA	NA	5784	-323	intron_retention	FALSE	canonical	3	36	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	-11	True	NA	-3	True	AATAAA	-15	NA	100498852	100495376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496802_100497225
ES.31506.9	chr7	-	2563	10	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	17	-323	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	15.0636509600732	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2223	False	NA	-3	True	AATAAA	-15	NA	100512588	100495376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
ES.31507.1	chr7	-	8335	21	FSM	ENSMUSG00000032875.9	ENSMUST00000107032.3	10190	21	-525	2380	-525	3	multi-exon	FALSE	canonical	2	6	junction_5	4.18658572108586	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	9018	False	NA	-10	True	AATAAA	-14	NA	100581839	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
ES.31507.2	chr7	-	8300	20	NIC	ENSMUSG00000032875.9	novel	10190	21	NA	NA	-386	3	intron_retention	FALSE	canonical	3	6	junction_5	4.06866275580793	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	9157	False	NA	-10	True	AATAAA	-14	NA	100581700	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
ES.31507.3	chr7	-	5247	21	NNC	ENSMUSG00000032875.9	novel	10190	21	NA	NA	2398	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.64158665625194	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	4182	False	NA	-10	True	AATAAA	-14	NA	100578916	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528160_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534946_100535067_100539627_100539706_100577775
ES.31507.4	chr7	-	4587	21	FSM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	-68	-3	-68	3	multi-exon	FALSE	canonical	0	0	junction_20	5.07346035758633	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	6784	False	NA	-10	True	AATAAA	-14	NA	100543965	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100543649
ES.31507.5	chr7	-	7623	22	NNC	ENSMUSG00000032875.9	novel	10190	21	NA	NA	-462	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	5.03907632899454	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	9081	False	NA	-10	True	AATAAA	-14	NA	100581776	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775_100581077_100581725
ES.31507.6	chr7	-	4576	21	NNC	ENSMUSG00000032875.9	novel	10190	21	NA	NA	14934	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	5.07346035758633	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCTCCCCCGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	100566380	100521338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100566075
ES.31508.1	chr7	+	211	1	Intergenic	novelGene_25842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACATATACATATACAT	NA	False	NA	NA	False	TTTAAA	-8	NA	100633169	100633380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100633200_100633400
ES.31509.1	chr7	-	2868	7	Fusion	ENSMUSG00000048779.6_ENSMUSG00000032860.6	novel	3011	3	NA	NA	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	3.65148371670111	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGTTAATTTTTA	3103	False	NA	NA	False	AATAAA	-20	NA	100661205	100586838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_100588392_100589007_100589226_100624612_100625065_100632206_100632275_100648208_100648308_100652770_100652962_100660918
ES.31509.2	chr7	-	175	1	Intergenic	novelGene_25841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATACACTTGAG	NA	False	NA	NA	False	NA	NA	NA	100611301	100611126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100611100_100611300
ES.31509.3	chr7	-	3086	3	NNC	ENSMUSG00000032860.6	novel	3011	3	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCATTTTGTTGCT	3032	False	NA	NA	False	ATTAAA	-21	NA	100661276	100645772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100648308_100652768_100652962_100660918
ES.31509.4	chr7	-	3250	4	NNC	ENSMUSG00000032860.6	novel	3011	3	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.49691252107735	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCTGTGCATTTTGTT	3109	False	NA	NA	False	ATTAAA	-18	NA	100661199	100645775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100648308_100651918_100652165_100652770_100652962_100660918
ES.31509.5	chr7	-	2575	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	-19	455	-19	5	multi-exon	FALSE	canonical	2	2	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACTGGTTCTTTTTT	3084	False	NA	NA	False	AATACA	-32	NA	100661224	100646229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100648308_100652770_100652962_100660918
ES.31509.6	chr7	-	2496	4	NNC	ENSMUSG00000032860.6	novel	2372	3	NA	NA	-19	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACTGGTTCTTTTTT	3084	False	NA	NA	False	AATACA	-32	NA	100661224	100646229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100648308_100652770_100652962_100655711_100655851_100661136
ES.31509.7	chr7	-	2358	3	FSM	ENSMUSG00000032860.6	ENSMUST00000207916.2	2372	3	4	10	4	-10	multi-exon	FALSE	canonical	0	0	junction_2	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCCTGAAAAATCAAC	3068	False	NA	NA	False	AATACA	-17	NA	100661240	100646244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100648308_100652770_100652962_100661136
ES.3151.1	chr10	+	3681	2	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGATGGTGGTGGCAC	961	False	NA	NA	False	NA	NA	NA	76254868	76261315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76257924_76260689
ES.31510.1	chr7	-	2545	1	FSM	ENSMUSG00000108895.2	ENSMUST00000208100.2	246	1	-2539	240	-2539	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGTGTCAGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	100670614	100668069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100668100_100670600
ES.31511.1	chr7	+	4635	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-292	-27	-250	4	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCCTGATAAAGAGTTGA	NA	False	NA	20	True	AATAAA	-22	NA	100757689	100933616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.10	chr7	+	2365	4	ISM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	168634	3	17740	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	13.7679176187089	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAATGAAATTA	NA	False	NA	-10	True	TATAAA	-7	NA	100926615	100933586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.3	chr7	+	4339	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-150	127	-108	-127	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCAGGCCGAATAACC	NA	False	NA	NA	False	AATAAA	-16	NA	100757831	100933462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.5	chr7	+	1918	14	ISM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	-28	12475	14	9554	5prime_fragment	FALSE	canonical	3	23	junction_6	4.10656855847358	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGGTCTCTGGTAACG	NA	False	NA	NA	False	ATTAAA	-35	NA	100757953	100921114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776
ES.31511.6	chr7	+	3908	17	ISM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	68365	3	-13103	-3	3prime_fragment	FALSE	canonical	0	0	junction_14	8.25284042012203	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAATGAAATTA	NA	False	NA	-10	True	TATAAA	-7	NA	100826346	100933586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.7	chr7	+	3067	10	NNC	ENSMUSG00000030691.16	novel	4316	20	NA	NA	-328	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.0718016493698	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAAAAATGAAATTAA	5218	False	NA	-9	True	TATAAA	-8	NA	100899720	100933587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100899769_100902736_100902842_100908818_100908981_100920786_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.8	chr7	+	4357	9	ISM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	143426	3	1359	-3	3prime_fragment	FALSE	canonical	0	0	junction_6	9.66953980290686	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAATGAAATTA	6905	False	NA	-10	True	TATAAA	-7	NA	100901407	100933586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ES.31511.9	chr7	+	203	1	Intergenic	novelGene_25846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAGTCTCAGCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	100920136	100920339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100920100_100920300
ES.31512.1	chr7	-	5088	1	Intergenic	novelGene_25843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100769141	100764053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100764100_100769100
ES.31513.1	chr7	-	179	1	Intergenic	novelGene_25844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	100791184	100791005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100791000_100791200
ES.31514.1	chr7	-	175	1	Intergenic	novelGene_25845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTTAACTA	2433	False	NA	NA	False	NA	NA	NA	100860966	100860791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_100860800_100861000
ES.31515.1	chr7	-	5178	7	ISM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	9912	32	-30	-32	3prime_fragment	FALSE	canonical	3	20	junction_5	5.64702478203247	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGTTAGCTTCAATTT	6242	False	NA	NA	False	NA	NA	NA	100941383	100934559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314
ES.31515.10	chr7	-	2625	15	NNC	ENSMUSG00000047767.18	novel	2083	17	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_1	10.773408306131	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGCCTCTTTGAAGC	8417	False	NA	-3	True	NA	NA	NA	100951255	100938824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100939239_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.11	chr7	-	1769	12	NNC	ENSMUSG00000047767.18	novel	2655	17	NA	NA	-52	3	intron_retention	TRUE	non_canonical	0	0	junction_2	14.5431816405973	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGTGTCTTGCCTCTTT	9003	False	NA	-8	True	TTTAAA	-41	NA	100946041	100938829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100939142_100939376_100939453_100939569_100939618_100939788_100939939_100940693_100940800_100940921_100941207_100941314_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945783_100945963
ES.31515.12	chr7	-	2106	18	FSM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	37	4316	0	-11	multi-exon	FALSE	canonical	2	4	junction_10	9.70606060442378	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACTGTATCTAAGCCG	8414	False	NA	-22	True	TTTAAA	-27	NA	100951258	100938843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.13	chr7	-	1831	15	NIC	ENSMUSG00000047767.18	novel	2083	17	NA	NA	9	-19	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	10.8742815854658	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGTTAAAAACTGTAT	8425	False	NA	-30	True	TTTAAA	-19	NA	100951247	100938851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.14	chr7	-	1704	11	NIC	ENSMUSG00000047767.18	novel	2501	17	NA	NA	-62	-40	intron_retention	FALSE	canonical	3	10	junction_8	7.55248303539968	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTATTTGTTTACTCT	8993	False	NA	-51	True	NA	NA	NA	100946051	100938872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963
ES.31515.15	chr7	-	1426	4	ISM	ENSMUSG00000047767.18	ENSMUST00000151297.8	829	6	43	491	-14	-92	internal_fragment	FALSE	canonical	3	10	junction_2	10.1434160364686	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCATTCCCCACCCCA	9111	False	NA	NA	False	NA	NA	NA	100945933	100941701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100942686_100943082_100943192_100945327_100945442_100945714
ES.31515.2	chr7	-	5416	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	11	-3344	-9	-952	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAGCTGTGGCTGGAAT	8405	False	NA	NA	False	NA	NA	NA	100951267	100935479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.3	chr7	-	5164	16	ISM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	3034	953	-1885	-953	3prime_fragment	FALSE	canonical	2	4	junction_10	9.37277380975818	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAAGCTGTGGCTGGAA	7864	False	NA	NA	False	NA	NA	NA	100948261	100935480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212
ES.31515.4	chr7	-	4880	12	NNC	ENSMUSG00000047767.18	novel	2083	17	NA	NA	36	-999	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.9242319169453	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTCCTAAGGCTACTC	9161	False	NA	NA	False	AATAAA	-23	NA	100945883	100935526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100939239_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714
ES.31515.5	chr7	-	2024	17	NNC	ENSMUSG00000047767.18	novel	6459	18	NA	NA	-1	-1068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4731800328267	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTGTGTGGTATGT	8413	False	NA	NA	False	NA	NA	NA	100951259	100935595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100935874_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.6	chr7	-	3783	15	NIC	ENSMUSG00000047767.18	novel	2501	17	NA	NA	-6	1156	intron_retention	FALSE	canonical	3	10	junction_9	8.04198168287861	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATCCTCTCTTTTTATA	8432	False	NA	NA	False	NA	NA	NA	100951240	100937442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.7	chr7	-	2033	18	NNC	ENSMUSG00000047767.18	novel	6459	18	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.2211889282462	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTCTTTGAAGCATT	8399	False	NA	0	True	NA	NA	NA	100951273	100938821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100939239_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946029_100946114_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.8	chr7	-	2078	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	6	-1	6	1	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCTCTTTGAAGCAT	8400	False	NA	-1	True	NA	NA	NA	100951272	100938822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31515.9	chr7	-	2528	15	NNC	ENSMUSG00000047767.18	novel	2083	17	NA	NA	6	0	intron_retention	FALSE	canonical	3	4	junction_3	10.5203883687139	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCCTCTTTGAAGCA	8400	False	NA	-2	True	NA	NA	NA	100951272	100938823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100939142_100939376_100939479_100939569_100939613_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ES.31516.1	chr7	+	176	1	Intergenic	novelGene_25847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGACATTAAA	NA	False	NA	NA	False	NA	NA	NA	100963108	100963284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_100963100_100963300
ES.31517.1	chr7	+	1447	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	-46	-1	-46	1	multi-exon	TRUE	canonical	3	28	junction_2	26.7581763205193	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTTTGTGCCTGCTT	NA	False	NA	8	True	AATAAA	-19	NA	100970273	100995516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ES.31517.2	chr7	+	1307	8	NNC	ENSMUSG00000030688.16	novel	1400	7	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.5320173200634	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTCTTTGTGCCTGC	NA	False	NA	6	True	AATAAA	-17	NA	100970292	100995514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100970338_100970456_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ES.31518.1	chr7	-	3530	3	NNC	ENSMUSG00000110239.2	novel	468	2	NA	NA	-52	4502	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTACTGTGATTGCATG	6886	False	NA	NA	False	AATATA	-12	NA	100997243	100992113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_100995357_100996848_100996946_100997053
ES.31519.1	chr7	+	5149	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	0	-2	0	2	multi-exon	FALSE	canonical	3	35	junction_3	24.8085044217444	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGGCCTGTGATGGT	NA	False	NA	20	True	TATAAA	-25	NA	100997273	101061103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.10	chr7	+	5218	35	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32.5824612637984	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	100997304	101061101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101013216_101013319_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.11	chr7	+	8350	62	Fusion	ENSMUSG00000032812.19_ENSMUSG00000110195.2	novel	5147	34	NA	NA	32	-9	intron_retention	TRUE	canonical	0	0	junction_4	50.1191110146702	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCTACCAACCCTCC	NA	False	NA	-8	True	AATAAA	-5	NA	100997305	101162012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101100608_101100676_101130577_101130668_101133748_101133838_101143777_101143888_101144843_101144900_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152493_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.12	chr7	+	5442	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	32	3	intron_retention	FALSE	canonical	0	0	junction_3	32.0373691354377	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGTGCTGAGGCCTGTG	NA	False	NA	15	True	TATAAA	-20	NA	100997305	101061098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101033849_101033946_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126
ES.31519.13	chr7	+	5083	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	33.0511749456696	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	100997311	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044110_101045260_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053192_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.14	chr7	+	5072	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	49	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	29.0401387778838	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATGGTGCTGAGGCCTG	NA	False	NA	13	True	TATAAA	-18	NA	100997322	101061096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053192_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.15	chr7	+	4978	32	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	54	3	intron_retention	FALSE	canonical	0	0	junction_11	34.3299167517654	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGTGCTGAGGCCTGTG	NA	False	NA	15	True	TATAAA	-20	NA	100997327	101061098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060283_101060510
ES.31519.16	chr7	+	5161	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1940406764683	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	100997330	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997479_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.17	chr7	+	5093	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	29.1367378913545	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	100997337	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058308_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.18	chr7	+	5156	33	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	67	0	intron_retention	FALSE	canonical	0	0	junction_5	29.6542577044174	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	100997340	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035358_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.19	chr7	+	5270	34	NIC	ENSMUSG00000032812.19	novel	4926	33	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.1940406764683	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTATGGTGCTGAGGCC	NA	False	NA	11	True	TATAAA	-16	NA	101011180	101061094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101011444_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.2	chr7	+	5054	33	NIC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	29.0252449386736	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATGGTGCTGAGGCCTG	NA	False	NA	13	True	TATAAA	-18	NA	100997283	101061096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100997407_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.20	chr7	+	4740	31	NIC	ENSMUSG00000032812.19	novel	4404	31	NA	NA	-74	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.2830980278844	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101027322	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101027740_101034068_101034248_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.21	chr7	+	4767	32	NIC	ENSMUSG00000032812.19	novel	4404	31	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	27.1784866259281	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101027362	101061101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101027740_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.22	chr7	+	4604	32	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	-1324	-2	multi-exon	FALSE	canonical	0	0	junction_1	27.40458805401	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101030709	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101030926_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.23	chr7	+	4657	32	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	-50	-2	multi-exon	FALSE	canonical	0	0	junction_1	27.40458805401	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101031983	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101032253_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.24	chr7	+	6150	30	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	1356	11	NA	NA	-38	-1	intron_retention	FALSE	canonical	0	0	junction_1	28.2714883076503	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101031995	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101032150_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.25	chr7	+	6121	31	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	-32	1	intron_retention	FALSE	canonical	0	0	junction_1	34.989268195961	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATGGTGCTGAGGCCTG	NA	False	NA	13	True	TATAAA	-18	NA	101032001	101061096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101032192_101033349_101033435_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101060126_101060277_101060510
ES.31519.26	chr7	+	4547	32	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	27.40458805401	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101032033	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101032192_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.27	chr7	+	4406	31	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	12	-2	multi-exon	FALSE	canonical	0	0	junction_1	31.4847582172708	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101032046	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101032192_101034068_101034186_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.28	chr7	+	4945	28	NIC	ENSMUSG00000032812.19	novel	4404	31	NA	NA	65	-1	intron_retention	FALSE	canonical	3	79	junction_1	18.8824244566414	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101034673	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.29	chr7	+	4228	30	ISM	ENSMUSG00000032812.19	ENSMUST00000084895.12	4404	31	7343	-148	-75	-2	3prime_fragment	FALSE	canonical	3	63	junction_1	19.9627477085721	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101034739	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.3	chr7	+	5084	34	NIC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	29.6765235737497	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTATGGTGCTGAGGC	NA	False	NA	10	True	TATAAA	-15	NA	100997286	101061093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035640_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.30	chr7	+	4245	30	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	4139	32	NA	NA	103	0	multi-exon	FALSE	canonical	0	0	junction_1	26.4084355780299	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	101034917	101061101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101035017_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.31	chr7	+	4152	29	ISM	ENSMUSG00000032812.19	ENSMUST00000084895.12	4404	31	7951	-148	533	-2	3prime_fragment	FALSE	canonical	3	79	junction_2	18.9277290917698	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	101035347	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.32	chr7	+	3924	28	NIC	ENSMUSG00000032812.19	novel	4926	33	NA	NA	607	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.8774080172995	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	101035421	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101035481_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.33	chr7	+	5630	24	NNC	ENSMUSG00000032812.19	novel	4404	31	NA	NA	3018	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.9787945483107	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTATGGTGCTGAGGC	NA	False	NA	10	True	TATAAA	-15	NA	101037832	101061093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101038987_101039270_101039471_101041042_101041129_101041539_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.34	chr7	+	3366	23	ISM	ENSMUSG00000032812.19	ENSMUST00000084895.12	4404	31	11872	-144	-4306	0	3prime_fragment	FALSE	canonical	3	86	junction_1	17.3460167623769	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	101039268	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.35	chr7	+	3904	23	ISM	ENSMUSG00000032812.19	ENSMUST00000084895.12	4404	31	12031	-841	-4147	-1	3prime_fragment	FALSE	canonical	3	86	junction_1	17.3460167623769	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGCCTTCCTGTCAGT	NA	False	NA	NA	False	TATAAA	-13	NA	101039427	101061792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.36	chr7	+	3362	22	Fusion	ENSMUSG00000030653.18_ENSMUSG00000032812.19	novel	621	7	NA	NA	-1290	3	multi-exon	FALSE	canonical	0	0	junction_1	28.7864133988915	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGTGCTGAGGCCTGTG	NA	False	NA	15	True	TATAAA	-20	NA	101042284	101061098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101042566_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.37	chr7	+	3112	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	-112	693	-112	-1	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101043462	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.38	chr7	+	2433	19	NNC	ENSMUSG00000032812.19	novel	3693	21	NA	NA	23	235	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	34.2494931024939	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACAGTGTTAGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	101043597	101058761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053490_101053633_101057253_101057337_101058320_101058372_101058497
ES.31519.39	chr7	+	6597	20	NIC	ENSMUSG00000032812.19	novel	3693	21	NA	NA	24	-1	intron_retention	FALSE	canonical	3	23	junction_1	25.7719596813509	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101043598	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.4	chr7	+	4995	33	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.8949978099584	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	100997287	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034181_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.40	chr7	+	2930	21	NNC	ENSMUSG00000032812.19	novel	3693	21	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	33.6072908756419	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTATGGTGCTGAGGCC	NA	False	NA	11	True	TATAAA	-16	NA	101043617	101061094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053192_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.41	chr7	+	2931	20	NNC	ENSMUSG00000032812.19	novel	3693	21	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.9594370280219	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101043867	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050703_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.42	chr7	+	2105	14	ISM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	5758	693	-1655	-1	3prime_fragment	FALSE	canonical	3	96	junction_1	13.7526759096023	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGAGGCCTGTGAT	NA	False	NA	17	True	TATAAA	-22	NA	101049332	101061100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.43	chr7	+	4029	30	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	740	4	-56	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	2.53630007564597	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAACCCTCCCACAGGAG	7588	False	NA	0	True	AATAAA	-13	NA	101100466	101162020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101100676_101130577_101130668_101133748_101133838_101143777_101143888_101144843_101144900_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.44	chr7	+	4065	31	NIC	ENSMUSG00000110195.2	novel	4105	32	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	2.5298221281347	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGTTGTCTGTGGACT	7640	False	NA	14	True	AATAAA	-27	NA	101100518	101162034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101100676_101110686_101110749_101130577_101130668_101133748_101133838_101143777_101143888_101144843_101144900_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152493_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.45	chr7	+	3579	26	NNC	ENSMUSG00000110195.2	novel	567	3	NA	NA	-5447	0	intron_retention	FALSE	canonical	0	0	junction_1	2.68447387769	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCCTCCCACAGGAGG	877	False	NA	1	True	AATAAA	-14	NA	101145376	101162021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101145480_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.46	chr7	+	3367	23	ISM	ENSMUSG00000110195.2	ENSMUST00000163751.10	4218	31	79840	11	-86	-1	3prime_fragment	FALSE	canonical	0	0	junction_5	2.6921987081747	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTCCCACAGGAGGTT	2579	False	NA	3	True	AATAAA	-16	NA	101150737	101162023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152493_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.47	chr7	+	3320	23	ISM	ENSMUSG00000110195.2	ENSMUST00000209537.2	4100	31	51057	-10	-40	0	3prime_fragment	FALSE	canonical	0	0	junction_17	2.67873474511956	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGTTGTCTGTGGACT	2625	False	NA	14	True	AATAAA	-27	NA	101150783	101162034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ES.31519.5	chr7	+	5016	33	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	28.8993403903965	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTATGGTGCTGAGGC	NA	False	NA	10	True	TATAAA	-15	NA	100997293	101061093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053475_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.6	chr7	+	5217	35	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.7982851480153	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	False	NA	12	True	TATAAA	-17	NA	100997295	101061095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101020294_101020393_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.7	chr7	+	5205	33	NIC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	22	-2	intron_retention	FALSE	canonical	3	35	junction_3	25.1223373900101	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCTGAGGCCTGTGA	NA	False	NA	16	True	TATAAA	-21	NA	100997295	101061099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.8	chr7	+	5093	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	29.1718885526178	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTATGGTGCTGAGGCC	NA	False	NA	11	True	TATAAA	-16	NA	100997296	101061094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051044_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.31519.9	chr7	+	5340	34	NNC	ENSMUSG00000032812.19	novel	5147	34	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_2	35.4504271112373	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	100997296	101061101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_100997407_101016227_101016310_101022162_101022709_101025254_101025382_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ES.3152.1	chr10	+	164	1	Intergenic	novelGene_2476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	76268176	76268340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76268200_76268300
ES.31520.1	chr7	-	2317	1	Antisense	novelGene_ENSMUSG00000032812.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACCGTGTTCCGTCTCC	NA	False	NA	NA	False	AATAAA	-37	NA	101033824	101031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_101031500_101033800
ES.31521.1	chr7	-	180	1	Intergenic	novelGene_25848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	101156057	101155877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101155900_101156100
ES.31522.1	chr7	-	290	1	Intergenic	novelGene_25849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTCTGCAGGAACT	NA	False	NA	NA	False	NA	NA	NA	101271222	101270932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101270900_101271200
ES.31523.1	chr7	-	162	1	Intergenic	novelGene_25850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGAATCAAGGTGGGC	NA	False	NA	NA	False	NA	NA	NA	101276522	101276360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101276400_101276500
ES.31524.1	chr7	+	2346	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	-42	2323	-42	35	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCCTCTCCTGCCTTTC	NA	False	NA	13	True	NA	NA	NA	101312797	101437052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.10	chr7	+	13119	16	Fusion	ENSMUSG00000001829.18_ENSMUSG00000110360.2	novel	4627	16	NA	NA	-4	2570	intron_retention	FALSE	canonical	0	0	junction_1	263.143762988979	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTCACTCTGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	101312959	101447283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101313421_101315368_101315458_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.12	chr7	+	2017	15	NIC	ENSMUSG00000001829.18	novel	4627	16	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	204.076928772321	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCACCTTGCCCTCATGC	NA	False	NA	20	True	AATAAA	-26	NA	101312964	101437019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.13	chr7	+	3100	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	127	1400	3	958	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCTCCTGTCACAC	NA	False	NA	NA	False	NA	NA	NA	101312966	101437975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.14	chr7	+	2757	15	NIC	ENSMUSG00000001829.18	novel	2287	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	662	junction_8	69.9358671227009	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312966	101437017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.16	chr7	+	6971	16	FSM	ENSMUSG00000001829.18_ENSMUSG00000110360.2	ENSMUST00000001884.14	4627	16	128	-2472	4	1790	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCATGTTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	101312967	101441847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.17	chr7	+	2881	17	NNC	ENSMUSG00000001829.18	novel	4159	17	NA	NA	6	-44	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_16	190.738931117247	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	101312988	101444669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711_101436943_101443833
ES.31524.18	chr7	+	2030	17	NNC	ENSMUSG00000001829.18	novel	2287	17	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	192.786110430705	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCACCTTGCCCTCATGC	NA	False	NA	20	True	AATAAA	-26	NA	101312989	101437019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101313035_101313125_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.19	chr7	+	3711	18	NNC	ENSMUSG00000001829.18	novel	4159	17	NA	NA	7	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	249.545996065353	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	NA	False	NA	NA	False	NA	NA	NA	101312989	101444669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711_101436943_101442608_101443717_101444110
ES.31524.2	chr7	+	4280	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	96	251	24	-251	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCATTTACTCAGAATG	NA	False	NA	19	True	AAGAAA	-10	NA	101312935	101439124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.20	chr7	+	1738	15	NIC	ENSMUSG00000001829.18	novel	4627	16	NA	NA	325	35	combination_of_known_splicesites	FALSE	canonical	1	13	junction_5	201.655811536714	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCCTCTCCTGCCTTTC	NA	False	NA	13	True	NA	NA	NA	101313307	101437052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.21	chr7	+	4516	2	Intergenic	novelGene_25851	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGCTGCTTAGTGGAAA	541	False	NA	NA	False	ATTAAA	-13	NA	101317643	101323563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101319434_101320837
ES.31524.22	chr7	+	3160	2	Genic_Genomic	ENSMUSG00000001829.18	novel	4627	16	NA	NA	19695	17	multi-exon	FALSE	non_canonical	0	0	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATCAATTAAAACTAAG	NA	False	NA	NA	False	ACTAAA	-14	NA	101432507	101436114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_101433365_101433811
ES.31524.23	chr7	+	205	1	Intergenic	novelGene_25853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATCCCTAGAAATT	NA	False	NA	NA	False	AAAAAG	-5	NA	101446549	101446754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101446500_101446800
ES.31524.4	chr7	+	6294	16	FSM	ENSMUSG00000001829.18_ENSMUSG00000110360.2	ENSMUST00000001884.14	4627	16	116	-1783	-8	1101	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCTTTTTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	101312955	101441158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.6	chr7	+	3627	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	116	884	-8	-884	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGCCAGACTACTT	NA	False	NA	NA	False	TATAAA	-21	NA	101312955	101438491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.7	chr7	+	2066	15	NIC	ENSMUSG00000001829.18	novel	2287	17	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	201.550229218325	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312955	101437017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31524.9	chr7	+	4526	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	116	-15	-8	15	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTGGCCATATGTGT	NA	False	NA	NA	False	NA	NA	NA	101312955	101439390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ES.31525.1	chr7	-	222	1	Intergenic	novelGene_25852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAATAACAAAAAACT	3474	False	NA	NA	False	NA	NA	NA	101350964	101350742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101350700_101351000
ES.31526.1	chr7	+	734	1	ISM	ENSMUSG00000007946.12	ENSMUST00000008090.11	1609	3	3678	2	1245	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCCGACCACCTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	101471197	101471931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101471200_101471900
ES.31527.1	chr7	+	158	1	Intergenic	novelGene_25854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAACATGAC	NA	False	NA	NA	False	NA	NA	NA	101473992	101474150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101474000_101474200
ES.31528.1	chr7	+	280	1	Intergenic	novelGene_25855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGGAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101485002	101485282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101485000_101485300
ES.31529.1	chr7	-	4777	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-40	-7	-40	0	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCCGTTCCCCGACG	NA	False	NA	-1	True	AATAAA	-43	NA	101487050	101471838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.10	chr7	-	5163	27	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	141	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	45.2696882533579	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTGTTCCGTTCCCCG	NA	False	NA	-4	True	AATAAA	-40	NA	101486850	101471841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
ES.31529.11	chr7	-	4613	28	NIC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	36.0015241256394	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTGTTCCGTTCCCCG	NA	False	NA	-4	True	AATAAA	-40	NA	101486167	101471841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485824
ES.31529.12	chr7	-	4806	29	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_28	32.913228529649	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTGTTCCGTTCCCCG	NA	False	NA	-4	True	AATAAA	-40	NA	101487026	101471841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486871
ES.31529.13	chr7	-	4861	28	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-9	-3	intron_retention	FALSE	canonical	2	6	junction_16	36.7412634371421	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTGTTCCGTTCCCCG	NA	False	NA	-4	True	AATAAA	-40	NA	101487019	101471841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101479963_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.15	chr7	-	3229	16	NIC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	-713	6	intron_retention	FALSE	canonical	3	138	junction_14	17.881088706601	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101480070	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881
ES.31529.17	chr7	-	5103	27	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-26	6	intron_retention	FALSE	canonical	3	95	junction_26	22.7780648143426	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487036	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.18	chr7	-	4568	28	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	14	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_27	45.3925116042213	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487422	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487359
ES.31529.19	chr7	-	4920	26	NNC	ENSMUSG00000032737.14	novel	3817	27	NA	NA	42	6	intron_retention	FALSE	canonical	3	6	junction_3	35.9449801780443	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101486130	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
ES.31529.2	chr7	-	5698	29	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_28	28.1340631655664	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCCGTTCCCCGACG	NA	False	NA	-1	True	AATAAA	-43	NA	101487410	101471838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.20	chr7	-	5024	29	FSM	ENSMUSG00000032737.14	ENSMUST00000035836.14	4995	29	-44	15	-44	6	multi-exon	FALSE	canonical	3	20	junction_28	32.2947996066341	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487480	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
ES.31529.21	chr7	-	4556	28	NIC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	-136	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	43.1380213835647	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487146	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
ES.31529.23	chr7	-	5021	28	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	6	intron_retention	FALSE	canonical	3	95	junction_27	22.561727550624	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487026	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.24	chr7	-	5114	26	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	6	intron_retention	FALSE	canonical	0	0	junction_22	39.400182740693	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487026	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482853_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.25	chr7	-	4758	29	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	36.8776763124262	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487022	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478904_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.27	chr7	-	4723	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-18	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.252088696406	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487028	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472594_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.29	chr7	-	4731	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-17	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	37.1786057362268	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487027	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478872_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.30	chr7	-	4745	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.5961830283555	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487036	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478050_101478151_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.31	chr7	-	5338	26	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-15	6	intron_retention	FALSE	canonical	3	6	junction_4	49.6193510638743	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487025	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477693_101477967_101478057_101478155_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.32	chr7	-	5201	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	9	6	intron_retention	FALSE	canonical	0	0	junction_28	40.6330486532471	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101486982	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366_101486584_101486871
ES.31529.33	chr7	-	5185	28	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-36	6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	40.1707603398614	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAAACCATTTTG	NA	False	NA	-16	True	AATAAA	-28	NA	101487046	101471853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.35	chr7	-	4841	30	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	40.2347451908267	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGGAAAAGGAAAAC	NA	False	NA	-23	True	AATAAA	-21	NA	101487026	101471860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366_101486477_101486927
ES.31529.36	chr7	-	5022	25	NNC	ENSMUSG00000032737.14	novel	3817	27	NA	NA	29	-4	intron_retention	FALSE	canonical	3	6	junction_3	36.5903561975921	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAGGAAAAGGAA	NA	False	NA	-26	True	AATAAA	-18	NA	101486143	101471863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
ES.31529.4	chr7	-	4643	28	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3932567353139	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCCGTTCCCCGACG	NA	False	NA	-1	True	AATAAA	-43	NA	101487050	101471838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.40	chr7	-	3471	19	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	-1436	-6	intron_retention	FALSE	canonical	0	0	junction_11	42.322687491973	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAATAAAGGAAAAGG	NA	False	NA	27	True	AATAAA	-16	NA	101480793	101471865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478052_101478151_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765
ES.31529.41	chr7	-	4874	27	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	46.5635024811666	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487026	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476761_101477405_101477496_101477610_101477693_101477967_101478050_101478151_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.45	chr7	-	5318	28	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	4	-8	intron_retention	FALSE	canonical	3	6	junction_5	40.5133722779693	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487006	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.47	chr7	-	4608	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	36.3745222284354	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487026	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101479963_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.48	chr7	-	5531	28	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	48	junction_27	28.5034111019093	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487026	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.49	chr7	-	4782	30	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	40.2347451908267	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101487009	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366_101486442_101486927
ES.31529.50	chr7	-	4855	30	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	40.1023660422658	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	False	NA	25	True	AATAAA	-14	NA	101486991	101471867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366_101486477_101486871
ES.31529.51	chr7	-	6001	27	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	10	-10	intron_retention	FALSE	canonical	1	2	junction_19	36.128059543664	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAGAAAAAATAAAGGAA	NA	False	NA	23	True	AATAAA	-12	NA	101487426	101471869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481008_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
ES.31529.53	chr7	-	828	3	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-20	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCACCTTAATAAATTA	NA	False	NA	-5	True	AATAAA	-23	NA	101487030	101471897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472242_101485777_101486159_101486927
ES.31529.54	chr7	-	4671	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-5	-41	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	43.1724561426351	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAATCACCTTAATAAA	NA	False	NA	-8	True	AATAAA	-20	NA	101486996	101471900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475758_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486871
ES.31529.57	chr7	-	3753	26	NNC	ENSMUSG00000032737.14	novel	3817	27	NA	NA	-152	-1410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	37.2448331987136	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGATTCTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	101487588	101474560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487523
ES.31529.58	chr7	-	3824	26	ISM	ENSMUSG00000032737.14	ENSMUST00000035836.14	4995	29	-4	2931	-4	-1619	5prime_fragment	FALSE	canonical	3	20	junction_25	33.9153298671854	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGCTAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	101487440	101474769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
ES.31529.59	chr7	-	3597	25	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	40	-1624	intron_retention	FALSE	canonical	3	95	junction_24	23.3327008842859	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCTTCTTGCTAGAT	NA	False	NA	NA	False	NA	NA	NA	101486951	101474774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.60	chr7	-	3558	26	ISM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	-4	2932	-4	-1627	5prime_fragment	FALSE	canonical	3	95	junction_25	23.1380552337486	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAAATGCTTCTTGCTA	NA	False	NA	NA	False	NA	NA	NA	101487014	101474777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.61	chr7	-	4120	26	NNC	ENSMUSG00000032737.14	novel	3817	27	NA	NA	-11	-1633	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_25	29.4984745368299	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATTGAGAAATGCTTC	NA	False	NA	NA	False	NA	NA	NA	101487021	101474783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.31529.7	chr7	-	4750	29	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	37.3341229265384	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTCCGTTCCCCGAC	NA	False	NA	-2	True	AATAAA	-42	NA	101487030	101471839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478788_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ES.31529.8	chr7	-	4728	29	NNC	ENSMUSG00000032737.14	novel	4995	29	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	35.2749224387698	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTCCGTTCCCCGAC	NA	False	NA	-2	True	AATAAA	-42	NA	101487434	101471839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487359
ES.31529.9	chr7	-	5394	28	NNC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	1	-2	intron_retention	FALSE	canonical	3	48	junction_27	28.4735576320376	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTCCGTTCCCCGA	NA	False	NA	-3	True	AATAAA	-41	NA	101487009	101471840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486366
ES.3153.1	chr10	+	1484	1	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACTTCAAGCCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	76278222	76279706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76278200_76279700
ES.3153.2	chr10	+	1867	1	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTATGAGTATGTTTG	NA	False	NA	NA	False	NA	NA	NA	76278232	76280099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76278200_76280100
ES.3153.3	chr10	+	302	1	Antisense	novelGene_ENSMUSG00000001151.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAACTGTCAGCTTCG	NA	False	NA	NA	False	NA	NA	NA	76278259	76278561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76278300_76278600
ES.31530.1	chr7	+	188	1	Intergenic	novelGene_25856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTCTTAAGAATTATT	NA	False	NA	NA	False	NA	NA	NA	101496507	101496695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101496500_101496700
ES.31531.1	chr7	+	181	1	Intergenic	novelGene_25857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTTTTAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	101496874	101497055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101496900_101497100
ES.31532.1	chr7	-	178	1	Intergenic	novelGene_25858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACTTTAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	101497245	101497067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101497100_101497200
ES.31533.1	chr7	+	175	1	Intergenic	novelGene_25859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	101500266	101500441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101500300_101500400
ES.31534.1	chr7	-	200	1	Intergenic	novelGene_25860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGGATTATGTTAAAGC	NA	False	NA	NA	False	NA	NA	NA	101501484	101501284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101501300_101501500
ES.31535.10	chr7	-	935	5	NNC	ENSMUSG00000001827.13	novel	1039	5	NA	NA	775	-20	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	138.956827827926	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGTGCCTTATGAATTA	5611	False	NA	-20	True	AATAAA	-11	NA	101515839	101507557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101515793
ES.31535.11	chr7	-	174	1	Intergenic	novelGene_25861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	101509892	101509718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101509700_101509900
ES.31535.12	chr7	-	2752	1	NIC	ENSMUSG00000001827.13	novel	960	4	NA	NA	20	-1968	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATATATGCTTTTGTTT	8118	False	NA	NA	False	NA	NA	NA	101513332	101510580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101510600_101513300
ES.31535.2	chr7	-	1053	5	FSM	ENSMUSG00000001827.13	ENSMUST00000106982.8	1039	5	-19	5	-19	-5	multi-exon	FALSE	canonical	3	16	junction_4	136.80711787038	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTGGGTGTGAATGA	4817	False	NA	-5	True	AATAAA	-26	NA	101516633	101507542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101516484
ES.31535.5	chr7	-	1141	7	NIC	ENSMUSG00000001827.13	novel	1307	7	NA	NA	34	-16	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	137.964568720459	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTATGAATTATTTG	2176	False	NA	-16	True	AATAAA	-15	NA	101519274	101507553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517675_101518363_101518512_101519244
ES.31535.6	chr7	-	6075	4	NNC	ENSMUSG00000001827.13	novel	1313	7	NA	NA	40	-17	intron_retention	FALSE	canonical	1	8	junction_3	149.947398184237	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCTTATGAATTATTT	2961	False	NA	-17	True	AATAAA	-14	NA	101518489	101507554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101507952_101508303_101508440_101508572_101508757_101513131
ES.31535.9	chr7	-	1172	6	NIC	ENSMUSG00000001827.13	novel	1307	7	NA	NA	-32	-19	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	149.559887670458	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGCCTTATGAATTAT	2887	False	NA	-19	True	AATAAA	-12	NA	101518563	101507556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513314_101517604_101517675_101518363
ES.31536.1	chr7	-	309	1	Intergenic	novelGene_25862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	101521594	101521285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101521300_101521600
ES.31537.1	chr7	-	1528	1	Intergenic	novelGene_25863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTACTGTGGCCCAACTT	7329	False	NA	NA	False	NA	NA	NA	101543462	101541934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101541900_101543500
ES.31538.1	chr7	+	3352	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	-23	2	intron_retention	FALSE	canonical	3	98	junction_2	210.842802817644	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7726	False	NA	8	True	NA	NA	NA	101545523	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106
ES.31538.13	chr7	+	825	6	NNC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	220.456435605768	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCCAATGTCTATTCCC	7803	False	NA	17	True	AATAAA	-17	NA	101545600	101548743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548388
ES.31538.14	chr7	+	1580	3	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	304	junction_1	141.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7805	False	NA	24	True	AATAAA	-24	NA	101545602	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101546939_101547821_101548106
ES.31538.15	chr7	+	1383	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	222.551926525025	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7806	False	NA	8	True	NA	NA	NA	101545603	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101550138
ES.31538.16	chr7	+	3182	4	NIC	ENSMUSG00000030649.19	novel	836	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	15	junction_1	274.23145131237	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAACTTGGTCCAGACT	7809	False	NA	6	True	NA	NA	NA	101545606	101551052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101547153_101547279_101547760_101547821_101548106
ES.31538.17	chr7	+	3118	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-15	0	-6	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7811	False	NA	10	True	NA	NA	NA	101545608	101551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.18	chr7	+	4038	3	ISM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-15	4	-6	0	intron_retention	FALSE	canonical	3	304	junction_1	78.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAACTTGGTCCAGACT	7811	False	NA	6	True	NA	NA	NA	101545608	101551052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101545658_101546939_101547025_101547148
ES.31538.19	chr7	+	775	6	NIC	ENSMUSG00000030649.19	novel	836	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	220.710670335623	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7813	False	NA	19	True	AATAAA	-19	NA	101545610	101548745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101546939_101546995_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.2	chr7	+	3117	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-98	-2369	-22	0	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7727	False	NA	10	True	NA	NA	NA	101545524	101551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.20	chr7	+	3557	4	ISM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-13	1	-4	-1	intron_retention	FALSE	canonical	3	304	junction_1	123.323423025258	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTGGTCCAGACTCCT	7813	False	NA	9	True	NA	NA	NA	101545610	101551055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760
ES.31538.22	chr7	+	878	4	ISM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-9	-63	-1	0	intron_retention	FALSE	canonical	3	48	junction_1	258.681700594035	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7816	False	NA	24	True	AATAAA	-24	NA	101545613	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106
ES.31538.23	chr7	+	5441	1	Genic_Genomic	ENSMUSG00000030649.19	novel	NA	NA	NA	NA	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7816	False	NA	8	True	NA	NA	NA	101545613	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_101545600_101551100
ES.31538.25	chr7	+	839	6	NNC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	200.656921136551	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGTCTATTCCCTGTT	7824	False	NA	21	True	AATAAA	-21	NA	101545621	101548747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101545658_101546939_101547025_101547148_101547322_101547760_101547821_101548106_101548245_101548400
ES.31538.26	chr7	+	714	5	NNC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	284.413870969754	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTCTATTCCCTGTTTG	7835	False	NA	23	True	AATAAA	-23	NA	101545632	101548749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548388
ES.31538.27	chr7	+	1829	5	FSM	ENSMUSG00000030649.19	ENSMUST00000143835.8	818	5	-515	-496	18	0	multi-exon	FALSE	canonical	3	43	junction_1	227.058775430504	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7855	False	NA	19	True	AATAAA	-19	NA	101545652	101548745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ES.31538.28	chr7	+	3291	4	NNC	ENSMUSG00000030649.19	novel	709	2	NA	NA	-200	0	intron_retention	FALSE	canonical	1	12	junction_1	275.645101937659	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	8072	False	NA	10	True	NA	NA	NA	101545869	101551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546021_101547148_101547279_101547760_101547821_101548106
ES.31538.29	chr7	+	3178	4	NNC	ENSMUSG00000030649.19	novel	709	2	NA	NA	-182	2	intron_retention	FALSE	canonical	0	0	junction_1	281.299761030036	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	8090	False	NA	8	True	NA	NA	NA	101545887	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101545933_101547153_101547279_101547760_101547821_101548106
ES.31538.30	chr7	+	808	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	204.430330430687	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	8178	False	NA	24	True	AATAAA	-24	NA	101545975	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.31	chr7	+	1194	5	NNC	ENSMUSG00000030649.19	novel	818	5	NA	NA	-91	0	intron_retention	FALSE	canonical	3	29	junction_1	232.940308877618	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	8181	False	NA	24	True	AATAAA	-24	NA	101545978	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ES.31538.32	chr7	+	2754	1	NIC	ENSMUSG00000030649.19	novel	841	6	NA	NA	-79	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAATGTCTATTCCCT	8193	False	NA	18	True	AATAAA	-18	NA	101545990	101548744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546000_101548700
ES.31538.33	chr7	+	3709	4	NIC	ENSMUSG00000030649.19	novel	818	5	NA	NA	-79	1	intron_retention	FALSE	canonical	0	0	junction_1	281.299761030036	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTTGGTCCAGACTC	8193	False	NA	7	True	NA	NA	NA	101545990	101551053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546568_101547153_101547279_101547760_101547821_101548106
ES.31538.34	chr7	+	3085	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-67	2	intron_retention	FALSE	canonical	3	40	junction_1	204.430330430687	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	8205	False	NA	8	True	NA	NA	NA	101546002	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.35	chr7	+	1884	6	NIC	ENSMUSG00000030649.19	novel	1328	5	NA	NA	-59	0	intron_retention	FALSE	canonical	1	3	junction_5	263.887854968735	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAACTTGGTCCAGACT	8213	False	NA	6	True	NA	NA	NA	101546010	101551052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101550138
ES.31538.36	chr7	+	4745	2	NIC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-47	1	intron_retention	FALSE	canonical	3	587	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTTGGTCCAGACTC	8225	False	NA	7	True	NA	NA	NA	101546022	101551053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101547821_101548106
ES.31538.37	chr7	+	992	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	208.612559545201	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	8227	False	NA	24	True	AATAAA	-24	NA	101546024	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.38	chr7	+	2274	3	NIC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-44	-4	intron_retention	FALSE	canonical	3	447	junction_2	70	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCCCAATGTCTATTC	8228	False	NA	15	True	AATAAA	-15	NA	101546025	101548741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101547821_101548106_101548245_101548400
ES.31538.39	chr7	+	1653	5	FSM	ENSMUSG00000030649.19	ENSMUST00000178851.2	2797	5	-957	2101	-25	0	multi-exon	FALSE	canonical	3	447	junction_4	71.736932607967	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	8247	False	NA	19	True	AATAAA	-19	NA	101546044	101548745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.4	chr7	+	3270	6	NNC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	-11	2	intron_retention	FALSE	canonical	0	0	junction_3	201.014825323905	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	7738	False	NA	8	True	NA	NA	NA	101545535	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101545658_101546939_101547025_101547148_101547360_101547760_101547821_101548106_101548245_101548400
ES.31538.40	chr7	+	3740	5	FSM	ENSMUSG00000030649.19	ENSMUST00000143835.8	818	5	-118	-2804	-20	1	multi-exon	FALSE	canonical	3	43	junction_1	227.058775430504	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTTGGTCCAGACTC	8252	False	NA	7	True	NA	NA	NA	101546049	101551053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ES.31538.41	chr7	+	3583	6	NIC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-18	2	intron_retention	FALSE	canonical	3	43	junction_1	203.291318063512	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	8254	False	NA	8	True	NA	NA	NA	101546051	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.42	chr7	+	1254	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-15	291	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	208.612559545201	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGTTTTGTCTGTA	8257	False	NA	NA	False	NA	NA	NA	101546054	101549042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.43	chr7	+	1760	4	ISM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	444	-63	-3	0	3prime_fragment	FALSE	canonical	3	447	junction_3	70.9005563369491	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	8269	False	NA	24	True	AATAAA	-24	NA	101546066	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.44	chr7	+	1014	7	NIC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	244.658775985385	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTCTATTCCCTGT	8270	False	NA	20	True	AATAAA	-20	NA	101546067	101548746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546151_101546395_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.45	chr7	+	1114	7	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	241.768311957268	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTCTATTCCCTGT	8273	False	NA	20	True	AATAAA	-20	NA	101546070	101548746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101546395_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.47	chr7	+	3435	6	NIC	ENSMUSG00000030649.19	novel	818	5	NA	NA	41	2	intron_retention	FALSE	canonical	1	1	junction_1	264.399394855586	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	8313	False	NA	8	True	NA	NA	NA	101546110	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101546151_101546395_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ES.31538.48	chr7	+	3881	3	NNC	ENSMUSG00000030649.19	novel	818	5	NA	NA	34	2	intron_retention	FALSE	canonical	3	29	junction_1	279	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTTGGTCCAGACTCC	8404	False	NA	8	True	NA	NA	NA	101546201	101551054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101546939_101547821_101548106
ES.31538.49	chr7	+	864	4	NNC	ENSMUSG00000030649.19	novel	818	5	NA	NA	46	-5	intron_retention	FALSE	canonical	1	1	junction_1	280.828536061894	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCCCCAATGTCTATT	8416	False	NA	14	True	AATAAA	-14	NA	101546213	101548740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101547148_101547279_101547760_101547821_101548106
ES.31538.5	chr7	+	1036	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-94	-5	-6	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7743	False	NA	24	True	AATAAA	-24	NA	101545540	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ES.31538.50	chr7	+	698	5	NNC	ENSMUSG00000030649.19	novel	818	5	NA	NA	62	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	244.128424195135	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGTCTATTCCCTGT	8432	False	NA	20	True	AATAAA	-20	NA	101546229	101548746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101546254_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.51	chr7	+	712	5	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_4	235.043081157476	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	9179	False	NA	19	True	AATAAA	-19	NA	101546976	101548745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101547025_101547148_101547279_101547760_101547821_101548106_101548236_101548400
ES.31538.52	chr7	+	1949	1	ISM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	3253	231	678	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTACTTGTGCTATCT	793	False	NA	NA	False	AATAAA	-13	NA	101548876	101550825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101548900_101550800
ES.31538.6	chr7	+	4209	2	FSM	ENSMUSG00000030649.19	ENSMUST00000146286.2	538	2	-49	-3622	19	0	multi-exon	FALSE	canonical	3	304	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7768	False	NA	10	True	NA	NA	NA	101545565	101551056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101546939
ES.31538.7	chr7	+	850	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-53	2306	24	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7773	False	NA	24	True	AATAAA	-24	NA	101545570	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.8	chr7	+	761	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-48	-63	28	0	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTATTCCCTGTTTGT	7777	False	NA	24	True	AATAAA	-24	NA	101545574	101548750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ES.31538.9	chr7	+	3702	3	NIC	ENSMUSG00000030649.19	novel	937	5	NA	NA	28	1	intron_retention	FALSE	canonical	3	48	junction_1	269.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTTGGTCCAGACTC	7777	False	NA	7	True	NA	NA	NA	101545574	101551053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101545658_101547148_101547821_101548106
ES.31539.1	chr7	+	3060	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-73	-1868	-73	19	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTTTTTTTAGTAG	6954	False	NA	NA	False	NA	NA	NA	101555037	101562978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.10	chr7	+	1080	6	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	-27	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	427.432988900015	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGTTGCTGGTTCA	7074	False	NA	7	True	GATAAA	-11	NA	101555157	101561089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101559984_101560014_101560479
ES.31539.11	chr7	+	3195	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	-7	19	intron_retention	FALSE	canonical	1	1	junction_4	379.388570597481	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTTTTTTTAGTAG	7094	False	NA	NA	False	NA	NA	NA	101555177	101562978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101560029_101560479
ES.31539.12	chr7	+	982	4	ISM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	3758	2	-2155	-2	3prime_fragment	FALSE	canonical	3	733	junction_3	56.5469323266573	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTGTCCTGCCCA	NA	False	NA	26	True	GATAAA	-30	NA	101558868	101561108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.13	chr7	+	1092	4	ISM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	3758	-108	-2155	108	3prime_fragment	FALSE	canonical	3	733	junction_3	56.5469323266573	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCAGGGTTCCCGGG	NA	False	NA	NA	False	ATTAAA	-16	NA	101558868	101561218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.14	chr7	+	3432	4	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	-1754	3225	intron_retention	FALSE	canonical	0	0	junction_3	371.360561539142	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTTTTTACTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	101559269	101566184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101559314_101559626_101559754_101560479_101561627_101564070
ES.31539.2	chr7	+	1141	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-24	2	-24	-2	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTGTCCTGCCCA	7003	False	NA	26	True	GATAAA	-30	NA	101555086	101561108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.3	chr7	+	2031	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-22	-890	-22	890	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTCATCTACTCTCA	7005	False	NA	NA	False	NA	NA	NA	101555088	101562000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.4	chr7	+	1249	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-22	-108	-22	108	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCAGGGTTCCCGGG	7005	False	NA	NA	False	ATTAAA	-16	NA	101555088	101561218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.5	chr7	+	4643	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-17	-3507	-17	1658	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTGTACATCTATGT	7010	False	NA	NA	False	CATAAA	-22	NA	101555093	101564617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.6	chr7	+	3110	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	2	-1993	2	144	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAAAC	7029	False	NA	NA	False	NA	NA	NA	101555112	101563103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ES.31539.7	chr7	+	1065	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	11	-19	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	369.639689427421	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTGCTGGTTCAAC	7038	False	NA	9	True	GATAAA	-13	NA	101555121	101561091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101555248_101558870_101559017_101559235_101559314_101559650_101559754_101560479
ES.31539.9	chr7	+	1281	4	NIC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	-30	-13	intron_retention	FALSE	canonical	3	733	junction_3	77.6029781788188	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGTTCAACCTGCTC	7071	False	NA	15	True	GATAAA	-19	NA	101555154	101561097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101555248_101558870_101559314_101559626_101559754_101560479
ES.3154.1	chr10	-	6227	25	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	4412	256	intron_retention	TRUE	canonical	3	115	junction_22	36.3711338151562	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTGGTGGTGTACCA	NA	False	NA	NA	False	ATTAAA	-26	NA	76245454	76186840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301
ES.3154.10	chr10	-	4999	7	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-2132	-1	intron_retention	FALSE	canonical	3	168	junction_4	26.0154868406408	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76206799	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76204668_76205668
ES.3154.11	chr10	-	9300	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-23	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	50.5008910812473	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278583	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210669_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.12	chr10	-	6144	27	ISM	ENSMUSG00000001151.11	ENSMUST00000001179.7	9331	42	31112	-3	2418	-1	3prime_fragment	FALSE	canonical	1	2	junction_22	62.453639610448	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76247448	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359
ES.3154.13	chr10	-	8307	13	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-13970	-1	intron_retention	FALSE	canonical	3	149	junction_10	32.529046848761	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76218637	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853
ES.3154.14	chr10	-	2764	3	NIC	ENSMUSG00000001151.11	novel	875	8	NA	NA	38	-1	intron_retention	FALSE	canonical	3	195	junction_1	20	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76192018	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76190970_76191997
ES.3154.15	chr10	-	9482	42	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-25	-1	intron_retention	FALSE	canonical	0	0	junction_34	54.3053915395856	308	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278585	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76267198_76267394_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.17	chr10	-	8946	39	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-22	-1	intron_retention	FALSE	canonical	0	0	junction_14	54.5211336696193	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278642	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.18	chr10	-	3403	9	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-6436	-1	intron_retention	FALSE	canonical	3	133	junction_8	36.8864389037489	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76211103	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76204668_76205668_76205914_76210684
ES.3154.19	chr10	-	8508	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	67	-1	intron_retention	FALSE	canonical	0	0	junction_18	48.7159560616437	308	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76278493	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228711_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.2	chr10	-	9549	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	15	13	intron_retention	FALSE	canonical	3	21	junction_9	47.3778363267045	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGTAACTCTTTTA	NA	False	NA	-3	True	AATAAA	-31	NA	76278605	76187083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.21	chr10	-	9214	41	NNC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	-8136	-1	intron_retention	FALSE	canonical	0	0	junction_40	51.3993616205493	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGCTACAGCCATT	NA	False	NA	-17	True	AATAAA	-17	NA	76286756	76187097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76286693
ES.3154.25	chr10	-	2355	12	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-11409	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	66.2712931631839	296	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76216076	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203310_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050
ES.3154.26	chr10	-	10831	40	NNC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	34	-2	intron_retention	FALSE	canonical	3	21	junction_9	50.7786445558788	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278526	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.28	chr10	-	9373	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	22	-2	intron_retention	FALSE	canonical	0	0	junction_5	53.6800649682915	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278598	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192074_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.3	chr10	-	9358	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-22	13	intron_retention	FALSE	canonical	3	35	junction_29	45.1796345160073	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGTAACTCTTTTA	NA	False	NA	-3	True	AATAAA	-31	NA	76278642	76187083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.32	chr10	-	9589	41	NNC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	14	-2	intron_retention	FALSE	canonical	3	21	junction_9	50.3698756698882	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278606	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.35	chr10	-	4996	9	NIC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	-11577	-2	intron_retention	FALSE	canonical	3	33	junction_8	65.1333967715488	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76216244	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996
ES.3154.36	chr10	-	7025	28	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-6267	-2	intron_retention	FALSE	canonical	0	0	junction_5	66.6899547802149	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76259013	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192071_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601
ES.3154.37	chr10	-	2011	5	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-984	-2	intron_retention	FALSE	canonical	3	168	junction_4	32.104322138927	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76193040	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190970_76191997_76192231_76192868
ES.3154.38	chr10	-	4628	17	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-20163	-2	intron_retention	FALSE	canonical	3	133	junction_8	34.1887568324735	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76224830	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685
ES.3154.4	chr10	-	3136	5	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	95	13	intron_retention	FALSE	canonical	3	168	junction_3	32.4759526419165	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGTAACTCTTTTA	NA	False	NA	-3	True	AATAAA	-31	NA	76203275	76187083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76192231_76192868_76192989_76203141
ES.3154.40	chr10	-	9321	42	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	21	-2	intron_retention	FALSE	canonical	1	2	junction_22	54.1392985971166	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278599	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.41	chr10	-	4322	19	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	21771	-2	intron_retention	FALSE	canonical	0	0	junction_13	63.5725744501685	296	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	9749	False	NA	-18	True	AATAAA	-16	NA	76228095	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217248_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027
ES.3154.42	chr10	-	9311	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	14	-2	intron_retention	FALSE	non_canonical	0	0	junction_38	48.586932399566	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278606	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272523_76272978_76273051_76275976_76276190_76278398
ES.3154.43	chr10	-	9191	41	NIC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	21	-2	intron_retention	FALSE	canonical	0	0	junction_5	51.5043141396912	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCCTGGCTACAGCCAT	NA	False	NA	-18	True	AATAAA	-16	NA	76278599	76187098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192071_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.45	chr10	-	9122	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_5	53.3403927619586	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76278584	76187100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192071_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269816_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.46	chr10	-	6746	29	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-1657	0	intron_retention	FALSE	canonical	0	0	junction_13	49.6846689284593	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76254403	76187100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217282_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193
ES.3154.49	chr10	-	9341	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-8056	0	intron_retention	FALSE	canonical	0	0	junction_40	48.4589452526569	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76286676	76187100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76286429
ES.3154.5	chr10	-	4924	20	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	14740	12	intron_retention	FALSE	canonical	0	0	junction_19	52.1086654923208	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTCTGTAACTCTTTT	2718	False	NA	-4	True	AATAAA	-30	NA	76235126	76187084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235097
ES.3154.51	chr10	-	5297	22	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	9517	0	intron_retention	FALSE	canonical	0	0	junction_13	52.5800113766808	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76240349	76187100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255
ES.3154.53	chr10	-	9054	40	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	2538	0	intron_retention	FALSE	canonical	0	0	junction_39	50.5201088064926	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76276022	76187100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275852
ES.3154.54	chr10	-	9008	4	NIC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	4459	-1	intron_retention	FALSE	canonical	3	168	junction_3	35.3490531069158	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCCTGGCTACAGC	NA	False	NA	-21	True	AATAAA	-13	NA	76198911	76187101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76188871_76190006_76190970_76191997_76192231_76192868
ES.3154.55	chr10	-	5896	27	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	1383	-3	intron_retention	FALSE	canonical	0	0	junction_18	57.3132805742047	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTCCTGGCTACA	NA	False	NA	-23	True	AATAAA	-11	NA	76248483	76187103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331
ES.3154.56	chr10	-	3168	17	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	3847	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	56.5794518796356	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCTTCTCCTGGCTA	NA	False	NA	-25	True	AATAAA	-9	NA	76274713	76187105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221609_76274693
ES.3154.57	chr10	-	3050	15	NNC	ENSMUSG00000001151.11	novel	6762	30	NA	NA	-16072	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.246458604231	296	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAATAAAACTATGTC	NA	False	NA	-45	True	NA	NA	NA	76220739	76187125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190899_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574
ES.3154.58	chr10	-	4253	21	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	17	2427	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	20.8573128662347	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTCCTAGTTGGGCCG	NA	False	NA	NA	False	ATTAAA	-3	NA	76278603	76237164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254404_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.59	chr10	-	5273	12	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-16	-14372	intron_retention	FALSE	canonical	3	73	junction_1	11.7339656729182	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGTTTCCCAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	76278636	76253963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76254401_76255811_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.6	chr10	-	9429	41	NIC	ENSMUSG00000001151.11	novel	9331	42	NA	NA	-45	10	intron_retention	FALSE	canonical	3	33	junction_11	46.6543071430709	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATTCTGTAACTCTT	NA	False	NA	-6	True	AATAAA	-28	NA	76278665	76187086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ES.3154.61	chr10	-	3600	5	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	-12687	-14372	intron_retention	FALSE	canonical	3	93	junction_2	5.2618912949623	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGGTTTCCCAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	76265433	76253963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033
ES.3154.62	chr10	-	3722	1	Antisense	novelGene_ENSMUSG00000009114.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCTTGATAAAGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	76286660	76282938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_76282900_76286700
ES.3154.9	chr10	-	10118	40	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_37	48.9631884159453	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGGCTACAGCCATTC	NA	False	NA	-16	True	AATAAA	-18	NA	76278597	76187096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272539_76272978_76273051_76275976_76276190_76278398
ES.31540.1	chr7	-	159	1	Antisense	novelGene_ENSMUSG00000030842.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTCAT	NA	False	NA	NA	False	NA	NA	NA	101561733	101561574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_101561600_101561700
ES.31541.1	chr7	-	1090	5	FSM	ENSMUSG00000064307.14	ENSMUST00000106964.8	872	5	-57	-161	-2	-3	multi-exon	FALSE	canonical	1	2	junction_3	5.43139024560011	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGATTATAAGTCCCCT	2534	False	NA	NA	False	AATAAA	-15	NA	101583066	101562203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101562791_101564768_101564975_101569843_101569982_101570710_101570774_101582970
ES.31541.2	chr7	-	203	1	Intergenic	novelGene_25864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTTAGAAGTCCAAG	NA	False	NA	NA	False	NA	NA	NA	101574993	101574790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101574800_101575000
ES.31541.3	chr7	-	247	1	Intergenic	novelGene_25865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTTTGGTATTTT	NA	False	NA	NA	False	NA	NA	NA	101575425	101575178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101575200_101575400
ES.31542.1	chr7	+	7257	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-162	-1	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTCTTTGGGTCAGTAT	1931	False	NA	36	True	AATAAA	-24	NA	101583155	101664170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.10	chr7	+	7053	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	90.6278926741407	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2094	False	NA	31	True	AATAAA	-19	NA	101583318	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658536_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.11	chr7	+	7270	24	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	160	junction_1	65.9775696547132	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2094	False	NA	28	True	AATAAA	-16	NA	101583318	101664162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662854_101662944_101663149_101663442
ES.31542.12	chr7	+	7012	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_19	89.5200066868978	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2097	False	NA	29	True	AATAAA	-17	NA	101583321	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661159_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.13	chr7	+	7885	24	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	4	1	intron_retention	FALSE	canonical	3	160	junction_1	66.6808271035506	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2097	False	NA	29	True	AATAAA	-17	NA	101583321	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.15	chr7	+	6068	21	NNC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	135.642277701313	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTGCTAAGCTCTTTG	2100	False	NA	27	True	AATAAA	-15	NA	101583324	101664161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640662_101640743_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643907_101647858_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.16	chr7	+	7051	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	108.61511430531	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2104	False	NA	31	True	AATAAA	-19	NA	101583328	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656741_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661094_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.17	chr7	+	7183	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	121.947227930773	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2104	False	NA	32	True	AATAAA	-20	NA	101583328	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101657912_101657946_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661159_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.18	chr7	+	7512	24	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	126	junction_1	68.3995544928504	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2104	False	NA	28	True	AATAAA	-16	NA	101583328	101664162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944
ES.31542.19	chr7	+	7100	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	90.4987338769628	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGGGTCAGTATGAG	2104	False	NA	39	True	AATAAA	-27	NA	101583328	101664173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662931_101663149_101663442
ES.31542.2	chr7	+	7184	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-139	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.0695777973973	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	1954	False	NA	32	True	AATAAA	-20	NA	101583178	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583337_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.20	chr7	+	7157	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	91.0383008531147	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2104	False	NA	32	True	AATAAA	-20	NA	101583328	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660364_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.21	chr7	+	7187	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	108.75296132622	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2110	False	NA	31	True	AATAAA	-19	NA	101583334	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658295_101658418_101658500_101658720_101658823_101659094_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.23	chr7	+	7134	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.649898197709	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2115	False	NA	31	True	AATAAA	-19	NA	101583339	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101584067_101584134_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.24	chr7	+	7265	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	101.494165349541	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2127	False	NA	32	True	AATAAA	-20	NA	101583351	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101584067_101584134_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.26	chr7	+	7114	24	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	95.5478482455143	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTAAGCTCTTTGGGT	2129	False	NA	30	True	AATAAA	-18	NA	101583353	101664164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.27	chr7	+	7310	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	107.087149555864	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2130	False	NA	32	True	AATAAA	-20	NA	101583354	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640041_101640156_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.28	chr7	+	7172	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	93.0281842000345	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	2132	False	NA	31	True	AATAAA	-19	NA	101583356	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656741_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.29	chr7	+	7129	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.532692703196	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2132	False	NA	29	True	AATAAA	-17	NA	101583356	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640662_101640743_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.3	chr7	+	7331	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-98	4	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	1995	False	NA	32	True	AATAAA	-20	NA	101583219	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.30	chr7	+	8032	23	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	12	-1	intron_retention	FALSE	canonical	3	160	junction_1	67.3224171523845	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTGCTAAGCTCTTTG	2132	False	NA	27	True	AATAAA	-15	NA	101583356	101664161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101661317_101661948_101662086_101662375_101662854_101662944_101663149_101663442
ES.31542.31	chr7	+	7247	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.414836288321	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2135	False	NA	29	True	AATAAA	-17	NA	101583359	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640662_101640722_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.32	chr7	+	6794	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	16	-392	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGAGACTGGATTCTT	2136	False	NA	NA	False	AAAAAG	-19	NA	101583360	101663770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.33	chr7	+	7077	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.53898641888	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2136	False	NA	28	True	AATAAA	-16	NA	101583360	101664162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101657912_101657946_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.34	chr7	+	7391	27	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	126.131775742955	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2136	False	NA	29	True	AATAAA	-17	NA	101583360	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101584067_101584158_101626586_101626658_101636932_101637019_101639779_101639860_101640041_101640156_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.39	chr7	+	3239	15	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	84.3220260764212	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2141	False	NA	29	True	AATAAA	-17	NA	101583365	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101648778_101663619
ES.31542.41	chr7	+	178	1	Intergenic	novelGene_25867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	101610185	101610363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101610200_101610400
ES.31542.42	chr7	+	7164	25	FSM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	10	6	10	3	multi-exon	FALSE	canonical	0	0	junction_1	86.0695777973973	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101619037	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101619177_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.43	chr7	+	7232	25	NIC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	-31	4	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	84.2736943272072	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101619355	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101619562_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.44	chr7	+	7254	25	NNC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	-30	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	85.3176967281701	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101619356	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101619585_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.45	chr7	+	3765	3	NNC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	18	-13384	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	6	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGTGAGCTTACCT	NA	False	NA	NA	False	AATAAA	-23	NA	101619404	101631262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101619562_101626586_101627189_101628256
ES.31542.46	chr7	+	7272	26	NNC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	116.157920091572	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTGCTAAGCTCTTTG	NA	False	NA	27	True	AATAAA	-15	NA	101619424	101664161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101619562_101626586_101626658_101636932_101637019_101639779_101639860_101640041_101640156_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.47	chr7	+	7114	25	NNC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	98.8185679667541	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101619427	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101619562_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662041_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.48	chr7	+	6582	25	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	-168	-697	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	84.8690167257757	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTTACGTGGCCCCAC	NA	False	NA	NA	False	ATTAAA	-11	NA	101619777	101663465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101620035_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.49	chr7	+	7203	25	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	-88	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	84.8690167257757	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101619857	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101620035_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.5	chr7	+	7090	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	90.5334499262872	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2073	False	NA	32	True	AATAAA	-20	NA	101583297	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656741_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.50	chr7	+	7028	24	ISM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	7557	5	6639	4	3prime_fragment	FALSE	canonical	3	241	junction_7	57.6465667153238	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101626584	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.51	chr7	+	7828	23	NIC	ENSMUSG00000066306.14	novel	7180	25	NA	NA	6639	3	intron_retention	FALSE	canonical	3	241	junction_7	58.8952705449426	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101626584	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.53	chr7	+	6681	18	NIC	ENSMUSG00000066306.14	novel	7180	25	NA	NA	-7898	0	intron_retention	FALSE	canonical	3	241	junction_2	61.6847101007017	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	NA	False	NA	28	True	AATAAA	-16	NA	101642473	101664162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.54	chr7	+	5098	15	NNC	ENSMUSG00000066306.14	novel	7180	25	NA	NA	-4730	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.534813870947	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101645641	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101645783_101647281_101647405_101647506_101648338_101649264_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.55	chr7	+	6065	13	NIC	ENSMUSG00000066306.14	novel	7180	25	NA	NA	-4692	-1	intron_retention	FALSE	canonical	3	256	junction_2	56.1134762977863	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTGCTAAGCTCTTTG	NA	False	NA	27	True	AATAAA	-15	NA	101645679	101664161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.56	chr7	+	4661	12	ISM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	29798	-214	-1546	214	3prime_fragment	FALSE	canonical	3	317	junction_2	41.2496932119821	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTGCTGCAGCTTTAT	NA	False	NA	NA	False	AATAAA	-10	NA	101648825	101664385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.57	chr7	+	5158	11	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	-1207	1	intron_retention	FALSE	canonical	3	317	junction_2	43.1620203419627	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	NA	False	NA	29	True	AATAAA	-17	NA	101649164	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.58	chr7	+	4088	13	FSM	ENSMUSG00000066306.14	ENSMUST00000163183.2	2934	13	-1151	-3	-1151	3	multi-exon	TRUE	canonical	1	3	junction_1	142.966196470821	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101649220	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101650867_101651501_101651544_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.59	chr7	+	6629	11	ISM	ENSMUSG00000066306.14	ENSMUST00000163183.2	2934	13	2093	-4	1843	4	3prime_fragment	FALSE	canonical	3	317	junction_1	40.1068572690506	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	NA	False	NA	32	True	AATAAA	-20	NA	101652464	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.6	chr7	+	7279	27	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.637207204363	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2085	False	NA	32	True	AATAAA	-20	NA	101583309	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101584067_101584134_101626586_101626658_101636932_101637019_101639779_101639860_101640041_101640156_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.60	chr7	+	4238	10	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	4316	3	intron_retention	FALSE	canonical	3	317	junction_1	41.639843217883	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101654937	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101656762_101658297_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.61	chr7	+	5495	6	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	5502	3	intron_retention	FALSE	canonical	3	317	junction_1	33.2	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101656123	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101656762_101658297_101658720_101658823_101661317_101661948_101662553_101662736_101662854_101662944
ES.31542.62	chr7	+	3607	9	NIC	ENSMUSG00000066306.14	novel	2934	13	NA	NA	7199	1	intron_retention	FALSE	canonical	3	357	junction_1	34.1428524731019	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	NA	False	NA	29	True	AATAAA	-17	NA	101657820	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101658418_101658500_101658720_101658823_101658982_101660039_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.63	chr7	+	1222	4	ISM	ENSMUSG00000066306.14	ENSMUST00000163183.2	2934	13	12003	-3	11753	3	3prime_fragment	FALSE	canonical	3	362	junction_2	15.9234278833282	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	False	NA	31	True	AATAAA	-19	NA	101662374	101664165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101662553_101662736_101662854_101662944_101663149_101663442
ES.31542.7	chr7	+	7687	25	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-8	218	intron_retention	FALSE	canonical	0	0	junction_3	106.804460151874	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCAGCTTTATGAGT	2085	False	NA	NA	False	AATAAA	-14	NA	101583309	101664389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101626586_101626658_101633904_101633976_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944
ES.31542.8	chr7	+	7393	24	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-8	4	intron_retention	FALSE	canonical	3	160	junction_1	64.5952645645081	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGCTCTTTGGGTCA	2085	False	NA	32	True	AATAAA	-20	NA	101583309	101664166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944
ES.31542.9	chr7	+	7109	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.208900685912	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTAAGCTCTTTGGG	2090	False	NA	29	True	AATAAA	-17	NA	101583314	101664163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101583383_101584067_101584158_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661159_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ES.31543.1	chr7	+	1112	1	Antisense	novelGene_ENSMUSG00000070426.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAAATATCCAAT	5328	False	NA	NA	False	NA	NA	NA	101669093	101670205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_101669100_101670200
ES.31544.1	chr7	+	3567	1	Intergenic	novelGene_25869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101694273	101697840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101694300_101697800
ES.31545.1	chr7	+	3431	10	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	-293	-1	intron_retention	FALSE	canonical	0	0	junction_6	39.3345888060777	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTGCCGATCTGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	101714424	101732971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719032_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727060_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.10	chr7	+	2450	8	ISM	ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-256	2763	-9	23	5prime_fragment	FALSE	canonical	3	50	junction_1	20.1767698310787	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714708	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211
ES.31545.11	chr7	+	4412	7	NIC	ENSMUSG00000099481.7	novel	3131	10	NA	NA	-8	29	intron_retention	FALSE	canonical	2	5	junction_1	37.9989034929518	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAGTGAATGAGTCTT	NA	False	NA	2	True	TATAAA	-16	NA	101714709	101731827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101730818_101731247
ES.31545.12	chr7	+	2602	7	ISM	ENSMUSG00000099481.7	ENSMUST00000153176.8	2456	8	-16	-23	-7	23	intron_retention	FALSE	canonical	2	17	junction_2	36.044725303742	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714710	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
ES.31545.13	chr7	+	2095	11	FSM	ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-253	456	-6	34	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATGAGTCTTGAGTG	NA	False	NA	7	True	TATAAA	-21	NA	101714711	101731832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.14	chr7	+	3134	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	-6	3	-6	-3	multi-exon	FALSE	canonical	2	5	junction_1	31.0606734006004	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714711	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.15	chr7	+	2513	6	ISM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	-4	3467	-4	0	intron_retention	FALSE	canonical	2	5	junction_1	41.0151191635475	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	101714713	101729502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
ES.31545.16	chr7	+	3117	7	NNC	ENSMUSG00000099481.7	novel	2456	8	NA	NA	-4	23	intron_retention	FALSE	canonical	0	0	junction_1	46.1389808681938	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714713	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101715837_101720425_101720569_101722381_101722524_101725029_101725160_101726955_101727135_101727939_101728026_101728211
ES.31545.17	chr7	+	3196	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	17	junction_2	28.6462912084619	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTTGCCGATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	101714714	101732968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.18	chr7	+	1737	8	NIC	ENSMUSG00000099481.7	novel	3131	10	NA	NA	-1	35	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	44.0695183656413	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGAGTCTTGAGTGT	NA	False	NA	8	True	TATAAA	-22	NA	101714716	101731833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101729735_101729812_101730689_101730818_101731247
ES.31545.19	chr7	+	1955	10	NNC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	1	35	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	44.3220537029191	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGAGTCTTGAGTGT	NA	False	NA	8	True	TATAAA	-22	NA	101714718	101731833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101715012_101719032_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
ES.31545.2	chr7	+	3546	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	-253	-4	intron_retention	FALSE	canonical	3	6	junction_1	29.1856128940271	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTATGTGTTGCCGATC	NA	False	NA	NA	False	AATAAA	-12	NA	101714464	101732965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719032_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.20	chr7	+	3261	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	1	-3	intron_retention	FALSE	canonical	2	6	junction_1	36.1315651473888	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714718	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719032_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.21	chr7	+	2717	1	NIC	ENSMUSG00000099481.7	novel	3131	10	NA	NA	3	-1773	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101714720	101717437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101714700_101717400
ES.31545.22	chr7	+	5630	8	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	50	junction_1	20.3218993166666	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTTGCCGATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	101714727	101732968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101730818_101731247
ES.31545.23	chr7	+	3136	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	18	-3	intron_retention	FALSE	canonical	2	11	junction_4	35.2073855888221	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714746	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725029_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.24	chr7	+	3591	9	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	23	33	intron_retention	FALSE	canonical	3	50	junction_1	19.3455421221531	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATGAGTCTTGAGT	NA	False	NA	6	True	TATAAA	-20	NA	101714751	101731831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101729812_101730689_101730818_101731247
ES.31545.25	chr7	+	3070	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	-56	-5	intron_retention	FALSE	canonical	0	0	junction_9	46.9494408912396	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTATGTGTTGCCGAT	NA	False	NA	NA	False	AATAAA	-11	NA	101714908	101732964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101726955_101727135_101727939_101728105_101728211_101728385_101729735_101729812_101730192_101730310_101730689_101730818_101731247
ES.31545.26	chr7	+	2953	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	-18	-9	intron_retention	FALSE	canonical	0	0	junction_2	43.7396844981763	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGACAGTATGTGTTGC	NA	False	NA	NA	False	AATAAA	-7	NA	101714946	101732960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720396_101720569_101722381_101722524_101725029_101725160_101726955_101727135_101727939_101728026_101728211_101728379_101729735_101729812_101730689_101730818_101731247
ES.31545.27	chr7	+	1988	11	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	-7	35	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	28.9048438847194	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGAGTCTTGAGTGT	NA	False	NA	8	True	TATAAA	-22	NA	101714957	101731833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.28	chr7	+	2771	10	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	0	-3	intron_retention	FALSE	canonical	1	6	junction_7	38.9884439986017	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714964	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
ES.31545.29	chr7	+	2517	7	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	1	23	intron_retention	FALSE	canonical	3	7	junction_1	36.731760401895	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714965	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
ES.31545.3	chr7	+	3245	11	FSM	ENSMUSG00000100254.2_ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-265	-682	-18	1	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTGCCGATCTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	101714699	101732970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.30	chr7	+	1913	11	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	2	28	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	31.3434203621749	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGAGTGAATGAGTCT	NA	False	NA	1	True	TATAAA	-15	NA	101714966	101731826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728105_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.31	chr7	+	2539	9	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	4	30	intron_retention	FALSE	canonical	1	6	junction_7	34.9991071314684	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGTGAATGAGTCTTG	NA	False	NA	3	True	TATAAA	-17	NA	101714968	101731828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101730818_101731247
ES.31545.32	chr7	+	3141	12	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	4	-4	intron_retention	FALSE	canonical	2	3	junction_1	37.4006673383694	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTATGTGTTGCCGATC	NA	False	NA	NA	False	AATAAA	-12	NA	101714968	101732965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101715666_101715837_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.33	chr7	+	3052	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	5	-1	intron_retention	FALSE	canonical	2	6	junction_7	31.3434203621749	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTTGCCGATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	101714969	101732968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728105_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.34	chr7	+	3105	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	7	junction_1	28.9048438847194	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTGCCGATCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101714976	101732969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.35	chr7	+	3173	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_1	30.8778237575124	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714976	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715150_101719032_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.36	chr7	+	5502	3	NNC	ENSMUSG00000099481.7	novel	749	3	NA	NA	17	23	intron_retention	TRUE	canonical	0	0	junction_1	58.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714981	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101716160_101724396_101727135_101727939
ES.31545.37	chr7	+	2999	10	ISM	ENSMUSG00000070425.14	ENSMUST00000084843.10	4173	23	0	12575	0	-12567	intron_retention	FALSE	canonical	0	0	junction_1	32.5474013299577	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714984	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101715150_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.38	chr7	+	1910	8	NNC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.0174288085874	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	101714987	101729500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725029_101725160_101726955_101727135_101727939_101728026_101728559
ES.31545.39	chr7	+	1740	10	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	29	28	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	44.1599226157848	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGAGTGAATGAGTCT	NA	False	NA	1	True	TATAAA	-15	NA	101714993	101731826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715150_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
ES.31545.4	chr7	+	2814	8	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	-17	23	intron_retention	FALSE	canonical	2	3	junction_1	45.4501296556378	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714700	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101715666_101715837_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
ES.31545.40	chr7	+	3041	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	40	-4	intron_retention	FALSE	canonical	2	7	junction_1	35.9249217118145	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTATGTGTTGCCGATC	NA	False	NA	NA	False	AATAAA	-12	NA	101715004	101732965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101715150_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.41	chr7	+	4976	9	ISM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	3530	7	3283	-7	3prime_fragment	FALSE	canonical	3	84	junction_7	10.917302780449	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACAGTATGTGTTGCCG	NA	False	NA	NA	False	AATAAA	-9	NA	101718247	101732962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.42	chr7	+	3685	5	ISM	ENSMUSG00000099481.7	ENSMUST00000146450.8	1050	6	3734	-2415	3569	0	3prime_fragment	FALSE	canonical	3	88	junction_1	8.20060973342836	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	101718533	101729502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955
ES.31545.43	chr7	+	1951	3	ISM	ENSMUSG00000099481.7	ENSMUST00000142629.8	2216	5	1711	12	-563	-9	3prime_fragment	FALSE	canonical	3	84	junction_1	9.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGACAGTATGTGTTGC	NA	False	NA	NA	False	AATAAA	-7	NA	101729701	101732960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101729812_101730689_101730818_101731247
ES.31545.44	chr7	+	3357	13	FSM	ENSMUSG00000100254.2	ENSMUST00000124189.3	2874	13	2	-485	2	485	multi-exon	FALSE	canonical	0	0	junction_1	1.01036297108185	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCACAACTCTGTTTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	101732324	101746088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101732394_101733067_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739823_101742736_101742930_101743434_101743563_101743701_101743781_101744374_101744508_101745063
ES.31545.5	chr7	+	4386	7	NIC	ENSMUSG00000099481.7	novel	3131	10	NA	NA	-14	29	intron_retention	FALSE	canonical	2	6	junction_1	37.6327280730778	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAGTGAATGAGTCTT	NA	False	NA	2	True	TATAAA	-16	NA	101714703	101731827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101730818_101731247
ES.31545.6	chr7	+	2809	8	NIC	ENSMUSG00000099481.7	novel	3131	10	NA	NA	-10	-3	intron_retention	FALSE	canonical	1	4	junction_3	49.2150632325063	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTATGTGTTGCCGATCT	NA	False	NA	NA	False	AATAAA	-13	NA	101714707	101732966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101720393_101720569_101722381_101722524_101726955_101727135_101727939_101728026_101729735_101729812_101730689_101730818_101731247
ES.31545.7	chr7	+	2073	11	NNC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	-9	35	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	29.2965868319161	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGAGTCTTGAGTGT	NA	False	NA	8	True	TATAAA	-22	NA	101714708	101731833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725029_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ES.31545.8	chr7	+	2636	7	ISM	ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-256	2763	-9	23	intron_retention	FALSE	canonical	3	50	junction_1	21.6544837543329	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGCAGACAGAGAAGATA	NA	False	NA	NA	False	AAAAAG	-44	NA	101714708	101729525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939
ES.31545.9	chr7	+	3604	9	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	-9	35	intron_retention	FALSE	canonical	2	17	junction_2	31.9880348724332	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGAGTCTTGAGTGT	NA	False	NA	8	True	TATAAA	-22	NA	101714708	101731833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101729812_101730689_101730818_101731247
ES.31546.1	chr7	-	1419	1	Intergenic	novelGene_25866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	101593410	101591991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101592000_101593400
ES.31547.1	chr7	-	180	1	Intergenic	novelGene_25868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTCAGTGTTAT	4785	False	NA	NA	False	NA	NA	NA	101615861	101615681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101615700_101615900
ES.31548.1	chr7	-	9371	12	Fusion	ENSMUSG00000070427.5_ENSMUSG00000070426.13	novel	2249	9	NA	NA	-15	3710	intron_retention	FALSE	canonical	2	4	junction_2	154.731438892741	190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTGTTCATACCT	NA	False	NA	NA	False	CATAAA	-18	NA	101714339	101660381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_101665398_101665484_101665575_101665956_101666149_101666493_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.10	chr7	-	2323	9	NIC	ENSMUSG00000070426.13	novel	2344	9	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	149.430585891912	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTGCCTTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-31	NA	101714689	101668346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714473
ES.31548.11	chr7	-	3974	8	NNC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.231439415834	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCATTTGCCTTTTTTT	NA	False	NA	-7	True	AATAAA	-27	NA	101714356	101668350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101669700_101672518_101672598_101678218_101678340_101678756_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
ES.31548.12	chr7	-	2354	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	-2	-8	-2	-7	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCATTTGCCTTTTTTT	NA	False	NA	-7	True	AATAAA	-27	NA	101714678	101668350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ES.31548.13	chr7	-	2132	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	128.061050491792	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGCATTTGCCTTTTTT	NA	False	NA	-8	True	AATAAA	-26	NA	101714364	101668351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.14	chr7	-	2189	9	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	120.056692337412	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACGCATTTGCCTTTT	NA	False	NA	-10	True	AATAAA	-24	NA	101714361	101668353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
ES.31548.15	chr7	-	2219	9	NNC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.692095038446	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACACGCATTTGCCTTTT	NA	False	NA	-10	True	AATAAA	-24	NA	101714363	101668353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684651_101688756_101688899_101691833_101691872_101714272
ES.31548.18	chr7	-	1611	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	12	721	12	259	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGATGGGTGTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	101714664	101669079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ES.31548.19	chr7	-	1837	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	16	0	intron_retention	FALSE	canonical	3	288	junction_3	52.1747456307422	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAATTGTCCCCCATTC	NA	False	NA	-2	True	AATATA	-24	NA	101714349	101669338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.2	chr7	-	4992	12	Fusion	ENSMUSG00000070427.5_ENSMUSG00000070426.13	novel	2249	9	NA	NA	17	19	intron_retention	FALSE	canonical	0	0	junction_3	155.169169213411	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCCTGGTACTGTCCTC	NA	False	NA	NA	False	CATAAA	-31	NA	101714348	101664370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_101665043_101665249_101665398_101665484_101665575_101666493_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.20	chr7	-	1187	9	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	18	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	120.056692337412	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGGAATTGTCCCCCA	NA	False	NA	-5	True	AATATA	-21	NA	101714347	101669341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
ES.31548.21	chr7	-	1251	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	0	998	0	-3	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGGAATTGTCCCCCA	NA	False	NA	-5	True	AATATA	-21	NA	101714365	101669341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.22	chr7	-	1132	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	128.061050491792	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGGAATTGTCCCCCA	NA	False	NA	-5	True	AATATA	-21	NA	101714354	101669341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.23	chr7	-	1308	10	NNC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	11	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	168.231615765913	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATTTTTTTATTGTG	NA	False	NA	-26	True	AAGAAA	-18	NA	101714354	101669362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101713315_101713451_101714272
ES.31548.24	chr7	-	1300	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	35	1009	35	-29	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTTAAATTTTTTTA	NA	False	NA	-31	True	AAGAAA	-13	NA	101714641	101669367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ES.31548.25	chr7	-	3629	8	ISM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	-6	1445	-6	-149	5prime_fragment	FALSE	canonical	3	288	junction_3	52.0109878500962	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGCAGACCCAAGGTA	NA	False	NA	NA	False	NA	NA	NA	101714371	101669788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.3	chr7	-	4868	14	Fusion	ENSMUSG00000070427.5_ENSMUSG00000070426.13	novel	2249	9	NA	NA	-14	4	intron_retention	FALSE	canonical	2	3	junction_5	172.204639513059	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCATTTTTATTTAGAC	NA	False	NA	NA	False	CATAAA	-16	NA	101714338	101664385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_101665043_101665249_101665398_101665484_101665575_101665956_101666149_101666493_101666559_101666803_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684623_101688756_101688899_101691833_101691872_101714272
ES.31548.4	chr7	-	1730	6	ISM	ENSMUSG00000070427.5	ENSMUST00000094134.5	1311	7	54	-1	12	1	intron_retention	FALSE	canonical	2	3	junction_5	1.78885438199983	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTCTCATTTTTATTTA	NA	False	NA	NA	False	CATAAA	-13	NA	101667350	101664388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101665043_101665249_101665398_101665484_101665609_101665956_101666149_101666493_101666559_101666803
ES.31548.6	chr7	-	4764	13	Fusion	ENSMUSG00000070427.5_ENSMUSG00000070426.13	novel	2249	9	NA	NA	5	-277	intron_retention	FALSE	canonical	2	3	junction_4	162.886698010884	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTTTGTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	101714360	101664798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_101665398_101665484_101665609_101665956_101666149_101666493_101666559_101666803_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31548.7	chr7	-	4639	14	Fusion	ENSMUSG00000070427.5_ENSMUSG00000070426.13	novel	2344	9	NA	NA	-1	-277	intron_retention	FALSE	canonical	2	3	junction_5	170.676655433774	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTTTGTCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	101714677	101664798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_101665043_101665249_101665398_101665484_101665575_101665956_101666149_101666493_101666559_101666803_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ES.31548.8	chr7	-	2667	5	ISM	ENSMUSG00000070427.5_ENSMUSG00000070426.13	ENSMUST00000094134.5	1311	7	-1186	547	-693	394	intron_retention	FALSE	canonical	3	5	junction_3	1.08972473588517	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGACCAGAGCCTGGCT	NA	False	NA	NA	False	CATAAA	-16	NA	101668590	101664936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101665043_101665249_101665398_101665484_101665609_101665956_101666149_101666493
ES.31548.9	chr7	-	2254	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	-6	1	-6	-1	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCCTTTTTTTTTTTGC	NA	False	NA	-1	True	AATAAA	-33	NA	101714371	101668344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ES.31549.1	chr7	-	193	1	Intergenic	novelGene_25870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTTTTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	101719929	101719736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101719700_101719900
ES.3155.1	chr10	-	335	1	Intergenic	novelGene_2477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76289810	76289475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76289500_76289800
ES.31550.1	chr7	-	179	1	Intergenic	novelGene_25871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	101737813	101737634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101737600_101737800
ES.31551.1	chr7	-	1725	5	FSM	ENSMUSG00000070424.13	ENSMUST00000106937.8	1713	5	-13	1	-13	-1	multi-exon	FALSE	canonical	1	2	junction_3	2.12132034355964	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATGGCTTTTATGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	101749449	101746087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101746428_101746514_101746548_101746987_101747718_101748640_101748851_101749037
ES.31552.1	chr7	+	1692	6	NNC	ENSMUSG00000030996.9	novel	1425	5	NA	NA	1220	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTAATTTTTGCAATGA	NA	False	NA	NA	False	AATAAA	-15	NA	101752169	101760355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101752319_101754481_101754657_101755466_101755573_101755873_101756640_101757933_101757976_101759901
ES.31553.1	chr7	+	2711	1	Antisense	novelGene_ENSMUSG00000063550.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAAGATCAGACTGCA	NA	False	NA	NA	False	TTTAAA	-28	NA	101791791	101794502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_101791800_101794500
ES.31554.1	chr7	+	204	1	Intergenic	novelGene_25872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATTAAGAACTCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	101798106	101798310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101798100_101798300
ES.31555.1	chr7	+	180	1	Intergenic	novelGene_25874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	101813821	101814001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101813800_101814000
ES.31556.1	chr7	+	177	1	Intergenic	novelGene_25875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	5976	False	NA	NA	False	NA	NA	NA	101826721	101826898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101826700_101826900
ES.31557.1	chr7	+	208	1	Intergenic	novelGene_25876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATGAAGCCCAGGTT	NA	False	NA	NA	False	NA	NA	NA	101831889	101832097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101831900_101832100
ES.31558.1	chr7	+	1857	1	Genic_Genomic	ENSMUSG00000030990.19	novel	NA	NA	NA	NA	-312	-9294	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAATAAACAACAG	NA	False	NA	NA	False	NA	NA	NA	101859102	101860959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_101859100_101861000
ES.31558.10	chr7	+	1867	7	NNC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	75.9241214781062	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859721	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885440_101885654_101885750_101886328_101886438_101886607
ES.31558.11	chr7	+	1573	5	NNC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.4493296242681	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCTGAGGTAGGTAT	NA	False	NA	8	True	AATAAA	-15	NA	101859721	101887766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101859805_101872570_101872698_101885654_101885750_101886328_101886438_101886607
ES.31558.12	chr7	+	2705	1	Intergenic	novelGene_25877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGAAAATTATTTTA	NA	False	NA	NA	False	NA	NA	NA	101863101	101865806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_101863100_101865800
ES.31558.13	chr7	+	2085	8	NNC	ENSMUSG00000030990.19	novel	902	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.2190720146573	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	-3	True	NA	9	True	AATAAA	-16	NA	101871637	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101871703_101872579_101872698_101875477_101875653_101884868_101884967_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.14	chr7	+	1963	7	NNC	ENSMUSG00000030990.19	novel	902	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.80281868936	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	4	False	NA	9	True	AATAAA	-16	NA	101871644	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101871693_101872574_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.15	chr7	+	3384	15	Fusion	ENSMUSG00000030987.6_ENSMUSG00000030990.19	novel	619	5	NA	NA	2	-470	multi-exon	TRUE	canonical	0	0	junction_2	28.2601796721472	356	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAATAAAAAAT	596	False	NA	NA	False	NA	NA	NA	101872236	102086055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101872358_101875477_101875653_101910721_101910798_101956555_101956701_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ES.31558.16	chr7	+	2181	7	NNC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.2307561218593	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTCTGAGGTAGGTA	601	False	NA	7	True	AATAAA	-14	NA	101872241	101887765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885558_101885654_101885762_101886328_101886438_101886607
ES.31558.17	chr7	+	1907	6	NIC	ENSMUSG00000030990.19	novel	1699	6	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	63.6948977548438	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	602	False	NA	9	True	AATAAA	-16	NA	101872242	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.18	chr7	+	2033	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	-33	-799	8	2	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGAGGTAGGTATGTT	602	False	NA	11	True	AATAAA	-18	NA	101872242	101887769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.19	chr7	+	2018	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	9	7	-8	0	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	603	False	NA	9	True	AATAAA	-16	NA	101872243	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.2	chr7	+	1557	1	Genic_Genomic	ENSMUSG00000030990.19	novel	NA	NA	NA	NA	-303	-9585	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAGTAAATGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	101859111	101860668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_101859100_101860700
ES.31558.20	chr7	+	1918	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	604	False	NA	10	True	AATAAA	-17	NA	101872244	101887768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.21	chr7	+	2018	5	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	29	junction_1	60.6150765074169	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	604	False	NA	9	True	AATAAA	-16	NA	101872244	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101875477_101875653_101885300_101885762_101886328_101886438_101886607
ES.31558.22	chr7	+	2281	7	NNC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.3290306461793	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCTGAGGTAGGTAT	609	False	NA	8	True	AATAAA	-15	NA	101872249	101887766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886070_101886438_101886607
ES.31558.23	chr7	+	1846	6	NIC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	60.9950817689426	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	612	False	NA	9	True	AATAAA	-16	NA	101872252	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101872585_101872698_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.24	chr7	+	2174	8	NIC	ENSMUSG00000030990.19	novel	1253	8	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	67.9594717160041	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCTGAGGTAGGTAT	618	False	NA	8	True	AATAAA	-15	NA	101872258	101887766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101872585_101872698_101875477_101875653_101880472_101880633_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.25	chr7	+	2111	8	FSM	ENSMUSG00000030990.19	ENSMUST00000119816.9	1253	8	-33	-825	-1	-2	multi-exon	FALSE	canonical	3	4	junction_4	67.5063111184156	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTCTGAGGTAGGTA	618	False	NA	7	True	AATAAA	-14	NA	101872258	101887765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101884868_101884967_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.26	chr7	+	2041	7	NNC	ENSMUSG00000030990.19	novel	1201	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.5135430204586	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	622	False	NA	9	True	AATAAA	-16	NA	101872262	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885624_101885762_101886328_101886438_101886607
ES.31558.27	chr7	+	2146	8	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	70.2401129653687	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	635	False	NA	9	True	AATAAA	-16	NA	101872275	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101872585_101872698_101875477_101875653_101880472_101880633_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.28	chr7	+	2662	5	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	-2	intron_retention	FALSE	canonical	3	118	junction_1	24.712092181764	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGTCTGAGGTAGGTA	637	False	NA	7	True	AATAAA	-14	NA	101872277	101887765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101886438_101886607
ES.31558.29	chr7	+	2177	8	NNC	ENSMUSG00000030990.19	novel	1254	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	65.6384655767128	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	637	False	NA	9	True	AATAAA	-16	NA	101872277	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101872358_101872585_101872698_101875477_101875653_101884898_101885080_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.3	chr7	+	2562	9	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-282	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	75.7528877337359	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	NA	False	NA	10	True	AATAAA	-17	NA	101859132	101887768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101859534_101859652_101859799_101872585_101872698_101875477_101875653_101884868_101884967_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.30	chr7	+	3797	15	Fusion	ENSMUSG00000030987.6_ENSMUSG00000030990.19	novel	619	5	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.5835844253877	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	637	False	NA	23	True	AATAAA	-23	NA	101872277	102086525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_101872358_101872585_101872698_101875477_101875653_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.31	chr7	+	1806	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	66.0284787042682	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	641	False	NA	10	True	AATAAA	-17	NA	101872281	101887768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872358_101872585_101872698_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.32	chr7	+	2336	8	NIC	ENSMUSG00000030990.19	novel	1254	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	76.0298008168172	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	643	False	NA	9	True	AATAAA	-16	NA	101872283	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101884868_101885080_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.33	chr7	+	2408	7	NIC	ENSMUSG00000030990.19	novel	1254	8	NA	NA	25	0	intron_retention	FALSE	canonical	1	2	junction_1	75.9780670105963	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	684	False	NA	9	True	AATAAA	-16	NA	101872324	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101884868_101885080_101885300_101885762_101886328_101886438_101886607
ES.31558.34	chr7	+	1163	1	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	1496	1	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	1759	False	NA	10	True	AATAAA	-17	NA	101886605	101887768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101886600_101887800
ES.31558.35	chr7	+	4727	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-549	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916463	102086525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.36	chr7	+	3436	12	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-539	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	21.4830319358564	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACTCTTATTGT	NA	False	NA	25	True	AATAAA	-25	NA	101916473	102086527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ES.31558.37	chr7	+	3697	14	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-537	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6541394311151	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	17	True	AATAAA	-17	NA	101916475	102086519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_101917582_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.38	chr7	+	3524	13	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-535	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	14.8847423745107	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGTGACTCTTATTG	NA	False	NA	24	True	AATAAA	-24	NA	101916477	102086526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.39	chr7	+	4602	14	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-530	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	15.7585329566792	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGCTGTGACTCTTA	NA	False	NA	21	True	AATAAA	-21	NA	101916482	102086523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101917479_101917582_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.4	chr7	+	2481	8	NNC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-279	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.9552014826459	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859135	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101859534_101859652_101859805_101872570_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.40	chr7	+	3592	13	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-526	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0233878673163	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101916486	102086518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_101917582_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ES.31558.41	chr7	+	3043	13	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-525	-470	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	14.8847423745107	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	101916487	102086055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.42	chr7	+	4602	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-517	0	-517	0	multi-exon	FALSE	canonical	2	5	junction_10	17.5852116683732	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916495	102086525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ES.31558.44	chr7	+	5508	12	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-505	-7	intron_retention	FALSE	canonical	0	0	junction_10	22.5307870176868	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101916507	102086518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076529_102077980_102080159_102084590
ES.31558.45	chr7	+	4152	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	-505	438	-505	-438	multi-exon	FALSE	canonical	2	5	junction_10	17.5852116683732	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGAATTTCCCAAGTG	NA	False	NA	NA	False	NA	NA	NA	101916507	102086087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ES.31558.46	chr7	+	4259	13	NIC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-505	-424	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCCTGCACAGCATCC	NA	False	NA	NA	False	NA	NA	NA	101916507	102086101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.47	chr7	+	4116	15	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-265	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9017380392451	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	17	True	AATAAA	-17	NA	101916747	102086519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101917088_101917304_101917479_101917582_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.48	chr7	+	4198	13	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-33	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.7474567818102	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGGCTGTGACTCT	NA	False	NA	19	True	AATAAA	-19	NA	101916979	102086521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075188_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.49	chr7	+	6219	12	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-27	-4	intron_retention	FALSE	canonical	3	50	junction_10	7.25452267027636	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTGGCTGTGACTCT	NA	False	NA	19	True	AATAAA	-19	NA	101916985	102086521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102080159_102084590
ES.31558.5	chr7	+	2204	7	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-31	0	intron_retention	FALSE	canonical	3	7	junction_1	59.4065559419909	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859510	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.50	chr7	+	3937	13	NNC	ENSMUSG00000030987.6	novel	2183	13	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.6620187322317	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101917011	102086518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101917479_101917582_101917761_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
ES.31558.51	chr7	+	5627	12	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	0	-7	intron_retention	FALSE	canonical	3	47	junction_10	7.70209802908187	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGCTGGCTGTGAC	NA	False	NA	16	True	AATAAA	-16	NA	101917012	102086518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102078074_102080091_102080159_102084590
ES.31558.53	chr7	+	8150	10	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	7	-6	intron_retention	FALSE	canonical	3	51	junction_1	6.83310749400969	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	17	True	AATAAA	-17	NA	101917067	102086519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102076008_102076288_102080159_102084590
ES.31558.54	chr7	+	7354	11	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-229	-6	intron_retention	FALSE	canonical	3	51	junction_1	6.6932802122726	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	False	NA	17	True	AATAAA	-17	NA	101917304	102086519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102080159_102084590
ES.31558.55	chr7	+	178	1	Intergenic	novelGene_25881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	442	False	NA	NA	False	NA	NA	NA	102066196	102066374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_102066200_102066400
ES.31558.57	chr7	+	5141	1	NIC	ENSMUSG00000030987.6	novel	4362	12	NA	NA	1428	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTGTGACTCTTATTG	5676	False	NA	24	True	AATAAA	-24	NA	102081385	102086526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102081400_102086500
ES.31558.6	chr7	+	1642	4	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	76.6072233321811	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859532	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101859799_101885654_101885762_101886328_101886438_101886607
ES.31558.7	chr7	+	2135	7	FSM	ENSMUSG00000030990.19	ENSMUST00000120879.8	2141	7	0	6	0	1	multi-exon	FALSE	canonical	3	7	junction_1	65.7809918509054	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGAGGTAGGTATGT	NA	False	NA	10	True	AATAAA	-17	NA	101859568	101887768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ES.31558.8	chr7	+	1971	6	NIC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	74.5557509518883	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859568	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_101859799_101872585_101872698_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31558.9	chr7	+	2236	8	NNC	ENSMUSG00000030990.19	novel	2141	7	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	73.7021030907531	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	False	NA	9	True	AATAAA	-16	NA	101859659	101887767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_101859799_101872585_101872698_101875477_101875653_101884898_101885080_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ES.31559.1	chr7	-	6673	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-29	1	combination_of_known_junctions	TRUE	canonical	3	48	junction_9	39.344581504319	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTATTGACTTTCTC	9941	False	NA	-5	True	AATAAA	-21	NA	101859412	101768603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.10	chr7	-	6577	33	NNC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_32	44.7288707100906	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTGGTATTGACTT	9982	False	NA	-9	True	AATAAA	-17	NA	101859371	101768607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859275
ES.31559.11	chr7	-	6538	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	45.4679679359063	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGTGGTATTGACT	9954	False	NA	-10	True	AATAAA	-16	NA	101859399	101768608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.15	chr7	-	6681	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_23	46.7379245768359	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGTGGTATTGACT	9958	False	NA	-10	True	AATAAA	-16	NA	101859095	101768608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.2	chr7	-	6688	33	FSM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	4	2	4	-2	multi-exon	FALSE	canonical	3	19	junction_23	43.7886324967736	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	9974	False	NA	-8	True	AATAAA	-18	NA	101859379	101768606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.20	chr7	-	4451	23	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	3083	-745	combination_of_known_splicesites	FALSE	canonical	3	33	junction_21	46.6336167895654	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGGGAATTCTTTTCCAC	8522	False	NA	NA	False	AATAAA	-26	NA	101829689	101769349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634
ES.31559.21	chr7	-	3320	21	ISM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	15438	13427	266	1378	internal_fragment	FALSE	canonical	3	19	junction_14	36.7641129363949	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGGCTTAAGACAGAGGAA	1401	False	NA	NA	False	NA	NA	NA	101843945	101782031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867
ES.31559.22	chr7	-	5049	23	NNC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	-30	962	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	43.3945239718539	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTGAACAATCATTT	9940	False	NA	NA	False	NA	NA	NA	101859413	101782447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859275
ES.31559.23	chr7	-	4838	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-64	-1026	-30	751	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTCATTAGTCTTTTT	9940	False	NA	NA	False	TATAAA	-17	NA	101859413	101782658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.24	chr7	-	4800	23	FSM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-52	-696	4	696	multi-exon	FALSE	canonical	3	19	junction_13	31.0306766371922	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCACTAATTTTAC	9974	False	NA	51	True	NA	NA	NA	101859379	101782713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.25	chr7	-	4952	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-285	-919	-251	644	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCATTACTCATCCATGA	9719	False	NA	-1	True	NA	NA	NA	101859634	101782765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.26	chr7	-	4698	23	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	-33	638	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	30.1171610287184	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGTATCATTACTCAT	9946	False	NA	-7	True	NA	NA	NA	101859107	101782771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.27	chr7	-	4527	22	NIC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	6	636	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	44.8376259230203	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTTGTATCATTACTC	9982	False	NA	-9	True	NA	NA	NA	101859343	101782773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101844155_101844258_101844991_101845096_101859224
ES.31559.29	chr7	-	4604	23	NNC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	-1	631	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	34.4264697316152	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGCACTTTGTATCAT	10003	False	NA	-14	True	NA	NA	NA	101859350	101782778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859275
ES.31559.30	chr7	-	4195	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-78	-369	-44	94	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCAGACTGGCTTCATG	9926	False	NA	89	True	TTTAAA	-10	NA	101859427	101783315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.32	chr7	-	3950	22	NIC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	-1	8	combination_of_known_splicesites	FALSE	canonical	3	19	junction_12	40.2308531098971	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGAAAATCCATTCTAAA	9995	False	NA	3	True	AATAAA	-23	NA	101859358	101783401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.33	chr7	-	4316	23	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_22	30.1171610287184	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9994	False	NA	-1	True	AATAAA	-19	NA	101859359	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.34	chr7	-	4112	23	FSM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-56	-4	0	4	multi-exon	FALSE	canonical	3	19	junction_13	31.0306766371922	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9970	False	NA	-1	True	AATAAA	-19	NA	101859383	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.35	chr7	-	3894	22	NIC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	29.4626093799229	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9996	False	NA	-1	True	AATAAA	-19	NA	101859357	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.36	chr7	-	3857	21	NIC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	-3	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	51.5538553359494	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9967	False	NA	-1	True	AATAAA	-19	NA	101859386	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101809747_101809936_101812895_101813030_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.38	chr7	-	4009	23	NNC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	34.1091163500584	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9998	False	NA	-1	True	AATAAA	-19	NA	101859355	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829658_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.39	chr7	-	4007	23	NNC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	34.9895202728706	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGAAAATCCATTC	9997	False	NA	-1	True	AATAAA	-19	NA	101859356	101783405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835094_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.4	chr7	-	6502	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	3	33	junction_21	43.133097499437	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	9968	False	NA	-8	True	AATAAA	-18	NA	101859385	101768606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.41	chr7	-	4137	23	NNC	ENSMUSG00000063550.9	novel	3748	23	NA	NA	-130	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	34.4264697316152	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATCTCAGGAAAATCCA	9840	False	NA	-4	True	AATAAA	-16	NA	101859513	101783408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859275
ES.31559.42	chr7	-	4094	23	NIC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	40.1861371599052	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATCTCAGGAAAATCCA	9964	False	NA	-4	True	AATAAA	-16	NA	101859089	101783408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.46	chr7	-	3993	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	-6	-239	2	-36	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGATTTTGAAAAAATA	9998	False	NA	-41	True	ATTAAA	-27	NA	101859355	101783445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.48	chr7	-	5696	20	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-31	8613	-1	1730	5prime_fragment	FALSE	canonical	3	19	junction_10	33.1104924327814	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCGACTGCTCTTCCG	9995	False	NA	NA	False	NA	NA	NA	101859358	101792022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.49	chr7	-	3918	20	NNC	ENSMUSG00000063550.9	novel	3961	20	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	45.8343397858102	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGTGTATGTTAATGT	9970	False	NA	NA	False	ATTAAA	-28	NA	101859083	101793750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835841_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.5	chr7	-	6644	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-33	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_32	42.9167867615634	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTGGTATTGACTTT	9946	False	NA	-8	True	AATAAA	-18	NA	101859107	101768606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.50	chr7	-	3940	21	NNC	ENSMUSG00000063550.9	novel	3132	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.2347385190383	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTTGTGTATGTTAAT	10002	False	NA	NA	False	ATTAAA	-26	NA	101859351	101793752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101857645_101857678_101859224
ES.31559.51	chr7	-	3856	20	NNC	ENSMUSG00000063550.9	novel	3132	20	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	36.4212808024493	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATCTTGTGTATGTT	9999	False	NA	NA	False	ATTAAA	-23	NA	101859326	101793755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829658_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.52	chr7	-	3905	20	FSM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	2	-775	2	-7	multi-exon	FALSE	canonical	3	124	junction_10	14.8011753669689	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGAGAATCTTGTGTA	9998	False	NA	NA	False	ATTAAA	-19	NA	101859355	101793759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.53	chr7	-	3950	20	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-23	10351	-1	-8	5prime_fragment	FALSE	canonical	3	19	junction_10	33.1104924327814	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGGAGAATCTTGTGT	10003	False	NA	NA	False	ATTAAA	-18	NA	101859350	101793760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.54	chr7	-	3738	19	NIC	ENSMUSG00000063550.9	novel	3961	20	NA	NA	17	-14	combination_of_known_splicesites	FALSE	canonical	3	26	junction_18	41.9460264602318	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCACTTTCTGGAGAATC	9996	False	NA	NA	False	ATTAAA	-12	NA	101859057	101793766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.31559.55	chr7	-	3561	20	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-31	10748	-1	377	5prime_fragment	FALSE	canonical	3	19	junction_10	33.1104924327814	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAAATTATTTAGCTT	9995	False	NA	NA	False	NA	NA	NA	101859358	101794157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.56	chr7	-	3476	20	FSM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	20	-364	-10	364	multi-exon	FALSE	canonical	3	124	junction_10	14.8011753669689	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAAGTA	9988	False	NA	NA	False	NA	NA	NA	101859337	101794170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.57	chr7	-	3229	20	FSM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	-92	-5	-66	5	multi-exon	FALSE	canonical	3	124	junction_10	14.8011753669689	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGCAGTCTGATCT	9904	False	NA	NA	False	AGTAAA	-19	NA	101859449	101794529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.58	chr7	-	3168	20	ISM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	-16	11126	6	-1	5prime_fragment	FALSE	canonical	3	19	junction_10	33.1104924327814	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTATGATGTGCAGTC	9982	False	NA	NA	False	AGTAAA	-13	NA	101859343	101794535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.59	chr7	-	1557	1	Intergenic	novelGene_25873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTGAGTTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	101800362	101798805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101798800_101800400
ES.31559.6	chr7	-	6466	33	NNC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	49.295495721592	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTGGTATTGACTT	9994	False	NA	-9	True	AATAAA	-17	NA	101859331	101768607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774408_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803303_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.60	chr7	-	2514	18	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	-16	7052	10	-4	5prime_fragment	FALSE	canonical	3	124	junction_8	14.8165249557616	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTATTGTCTATGT	9980	False	NA	NA	False	NA	NA	NA	101859373	101801586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.62	chr7	-	3334	12	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	-34	22304	-8	10650	5prime_fragment	FALSE	canonical	3	124	junction_2	14.3532758952659	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGCAAGTCTATTTGC	9962	False	NA	NA	False	AATAAA	-13	NA	101859391	101816838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.63	chr7	-	6657	11	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	0	25756	0	7198	5prime_fragment	FALSE	canonical	3	124	junction_1	14.7363496158309	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTACCTGTTCTGA	9996	False	NA	NA	False	NA	NA	NA	101859357	101820290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.64	chr7	-	3244	10	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	2	33189	2	-235	5prime_fragment	FALSE	canonical	3	127	junction_6	12.9995251575197	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTTTTTTGTTGTTGT	9998	False	NA	NA	False	TTTAAA	-10	NA	101859355	101827723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.7	chr7	-	6526	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	47.0465485612883	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTGGTATTGACTT	9994	False	NA	-9	True	AATAAA	-17	NA	101859359	101768607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ES.31559.8	chr7	-	6496	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	-27	-3	combination_of_known_splicesites	FALSE	canonical	3	26	junction_31	46.132303064731	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGTGGTATTGACTT	9952	False	NA	-9	True	AATAAA	-17	NA	101859101	101768607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
ES.3156.13	chr10	+	6220	28	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-24	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	81.0231554228644	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCGTTCTCTGACGTC	NA	False	NA	NA	False	NA	NA	NA	76304736	76348120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320489_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328693_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76347923
ES.3156.14	chr10	+	5998	24	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-23	8602	-23	2195	5prime_fragment	FALSE	canonical	3	127	junction_5	48.4162012597378	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTTGGTCACACCTGT	NA	False	NA	NA	False	AAGAAA	-28	NA	76304737	76343089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131
ES.3156.16	chr10	+	6382	27	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-21	0	intron_retention	FALSE	non_canonical	0	0	junction_1	76.8676723548622	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76304739	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305045_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.17	chr10	+	6461	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-21	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	64.866739378136	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTAGTTTTATGAATGA	NA	False	NA	16	True	AATAAA	-22	NA	76304739	76351695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325420_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.18	chr10	+	6508	28	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	127	junction_5	52.309960443411	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76304755	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.2	chr10	+	2586	1	Antisense	novelGene_ENSMUSG00000033126.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAGGTGTTATTTTA	5725	False	NA	NA	False	NA	NA	NA	76298880	76301466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76298900_76301500
ES.3156.20	chr10	+	6238	28	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.8163340551593	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76304755	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76325200_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.21	chr10	+	6312	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	65.6328979698319	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTAGTTTTATGAAT	NA	False	NA	14	True	AATAAA	-20	NA	76304757	76351693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320531_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.22	chr10	+	5202	22	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	66.2201372390885	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76304767	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329292_76342194_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.23	chr10	+	4944	22	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.9921693055198	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGAGCCGCCTTAGTTT	NA	False	NA	7	True	AATAAA	-13	NA	76304771	76351686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76306927_76320548_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.24	chr10	+	6381	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	75.0883832967687	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTAGTTTTATGAA	NA	False	NA	13	True	AATAAA	-19	NA	76304772	76351692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320489_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329345_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.25	chr10	+	6275	28	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.5352701814573	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTAGTTTTATGAA	NA	False	NA	13	True	AATAAA	-19	NA	76304775	76351692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312675_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.26	chr10	+	5310	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	17	10820	17	-23	5prime_fragment	FALSE	canonical	3	127	junction_5	49.0692081664525	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	76304777	76340871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463
ES.3156.27	chr10	+	6781	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.9601428035778	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76304780	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76317350_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.28	chr10	+	6429	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	65.44629945417	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76304785	76351691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342104_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.29	chr10	+	5436	25	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	1420	7104	1420	3693	internal_fragment	FALSE	canonical	3	127	junction_4	47.1627648562814	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGCCAGGTGGTCATT	NA	False	NA	NA	False	AATATA	-16	NA	76306180	76344587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131
ES.3156.3	chr10	+	6252	29	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-5880	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	64.111699002441	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAGTTTTATGAATGAA	5725	False	NA	17	True	AATAAA	-23	NA	76298880	76351696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76298989_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.30	chr10	+	4813	27	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	2545	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	64.6470160671823	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76307305	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336865_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.31	chr10	+	4357	24	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-2550	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.9423477907875	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76314401	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76314423_76316693_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.32	chr10	+	4450	24	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-1060	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.9423477907875	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGCCGCCTTAGTTTT	NA	False	NA	8	True	AATAAA	-14	NA	76315891	76351687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76316150_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.33	chr10	+	4380	23	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	11887	3	-304	-2	3prime_fragment	FALSE	canonical	3	162	junction_1	37.3435303124698	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76316647	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.34	chr10	+	4365	23	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-285	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	60.8083291380546	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCAGAGCCGCCTTAG	NA	False	NA	4	True	AATAAA	-10	NA	76316666	76351683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325420_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.35	chr10	+	5886	21	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-103	600	intron_retention	FALSE	canonical	3	193	junction_5	30.1587052109337	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCAGGAG	NA	False	NA	NA	False	AATAGA	-44	NA	76316848	76348899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251
ES.3156.38	chr10	+	4093	23	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.3107382332576	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76316900	76351691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76316975_76318457_76318656_76318985_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.39	chr10	+	4131	23	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-48	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.0571584032891	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGAGCCGCCTTAGTTT	NA	False	NA	7	True	AATAAA	-13	NA	76316903	76351686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325159_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.4	chr10	+	6389	30	NNC	ENSMUSG00000001150.8	novel	578	5	NA	NA	-5880	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.2679533457978	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	5725	False	NA	12	True	AATAAA	-18	NA	76298880	76351691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76298989_76302020_76302163_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.40	chr10	+	5105	20	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	12170	5794	-21	-2402	internal_fragment	FALSE	canonical	3	162	junction_1	32.8284384519145	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTATATAGAGCTTAAGA	NA	False	NA	NA	False	AATAAA	-8	NA	76316930	76345897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131
ES.3156.42	chr10	+	4058	22	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	13694	1	1420	0	3prime_fragment	FALSE	canonical	3	193	junction_5	34.1089357959727	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76318454	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.43	chr10	+	3747	21	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	1575	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	60.5599702774035	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76318609	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.44	chr10	+	3588	20	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	15725	3	3451	-2	3prime_fragment	FALSE	canonical	3	193	junction_3	33.7714331246226	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCGCCTTAGTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	76320485	76351688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.45	chr10	+	3400	20	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	3532	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	64.3882785568341	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGCCGCCTTAGTTTT	NA	False	NA	8	True	AATAAA	-14	NA	76320566	76351687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343321_76344176_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.47	chr10	+	2583	4	ISM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	20968	20251	8694	6239	internal_fragment	FALSE	canonical	3	214	junction_3	7.25718035235908	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTTGCCGAGCTTAA	NA	False	NA	NA	False	AATAAA	-10	NA	76325728	76331440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76325902_76326561_76326663_76328694_76328827_76329263
ES.3156.48	chr10	+	3846	9	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-3512	0	intron_retention	FALSE	canonical	3	231	junction_6	29.3502555355145	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGCCTTAGTTTTATG	NA	False	NA	11	True	AATAAA	-17	NA	76336609	76351690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76337179_76338485_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.49	chr10	+	3448	6	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-460	-4	intron_retention	FALSE	canonical	3	231	junction_3	33.2565782966318	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGAGCCGCCTTAGTTT	NA	False	NA	7	True	AATAAA	-13	NA	76339661	76351686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76340256_76340463_76340562_76342131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.50	chr10	+	1528	1	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-7	748	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	76340114	76341642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76340100_76341600
ES.3156.51	chr10	+	3926	1	NIC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	722	571	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-15	NA	76344944	76348870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76344900_76348900
ES.3156.6	chr10	+	6357	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-68	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	65.44629945417	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTCCAGAGCCGCCTT	NA	False	NA	2	True	AATAAA	-8	NA	76304692	76351681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342259_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.7	chr10	+	6480	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	-48	-5	-48	5	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAGTTTTATGAATGAA	NA	False	NA	17	True	AATAAA	-23	NA	76304712	76351696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.3156.9	chr10	+	6472	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	-47	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	75.2635759670436	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGCCTTAGTTTTATGAA	NA	False	NA	13	True	AATAAA	-19	NA	76304713	76351692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325915_76326573_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340252_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ES.31560.1	chr7	-	2624	1	Antisense	novelGene_ENSMUSG00000030990.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACTGGAATGAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	101876640	101874016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_101874000_101876600
ES.31561.1	chr7	-	5546	2	Antisense	novelGene_ENSMUSG00000111339.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCACAATTTCACAATTC	9068	False	NA	NA	False	NA	NA	NA	101887171	101881455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_101886436_101886605
ES.31562.1	chr7	-	1247	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	18	4	-17	-4	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGGCTCCTCCCTA	6378	False	NA	-6	True	AATAAA	-14	NA	101899312	101888333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_101889520_101899251
ES.31563.1	chr7	-	203	1	Intergenic	novelGene_25878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGCTTTAAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	101938816	101938613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101938600_101938800
ES.31564.1	chr7	-	177	1	Intergenic	novelGene_25879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101944018	101943841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101943800_101944000
ES.31565.1	chr7	-	173	1	Intergenic	novelGene_25880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAGAATAAATGG	NA	False	NA	NA	False	NA	NA	NA	101989672	101989499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_101989500_101989700
ES.31566.1	chr7	-	185	1	Intergenic	novelGene_25882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAGGAAAGGAAGAG	3802	False	NA	NA	False	NA	NA	NA	102068621	102068436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_102068400_102068600
ES.31567.1	chr7	+	3100	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-12	252	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_9	224.776734220679	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAACTTGTCATCTATT	NA	False	NA	NA	False	AATAAA	-22	NA	102090889	102118141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106430_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.10	chr7	+	1339	3	ISM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	97	22224	-91	30	5prime_fragment	FALSE	canonical	3	892	junction_1	46	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGGTGAGAAGTCACT	NA	False	NA	NA	False	AAAAAG	-25	NA	102090998	102096754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_102091251_102092193_102092283_102095756
ES.31567.12	chr7	+	2860	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-86	243	combination_of_known_splicesites	FALSE	canonical	1	11	junction_17	225.362852362392	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091003	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102117501
ES.31567.13	chr7	+	3023	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-86	243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	226.697826017339	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091003	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116248_102117501
ES.31567.15	chr7	+	3235	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-74	443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	222.070010370993	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTGATTCTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	102091015	102118332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116086_102116274_102117501
ES.31567.16	chr7	+	3116	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-74	242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.147284573003	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTGGTACTAAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	102091015	102118131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092113_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.17	chr7	+	4955	18	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-74	244	intron_retention	FALSE	non_canonical	0	0	junction_15	231.923803260966	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTACTAAACTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	102091015	102118133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102110059_102110813_102110891_102112852_102113688_102113895_102115021_102116084_102116274_102117501
ES.31567.18	chr7	+	5669	16	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-69	242	intron_retention	FALSE	canonical	3	773	junction_6	80.0598664889108	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTGGTACTAAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	102091020	102118131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.19	chr7	+	7316	17	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-68	241	intron_retention	FALSE	non_canonical	0	0	junction_14	238.612656831108	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102091021	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102113688_102113895_102115021_102116084_102116274_102117501
ES.31567.2	chr7	+	3152	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-7	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	303.683233275793	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102090894	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100267_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106854_102108602_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.20	chr7	+	4992	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-68	242	intron_retention	FALSE	canonical	3	773	junction_6	76.9842477034339	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTGGTACTAAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	102091021	102118131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.24	chr7	+	3621	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-63	241	intron_retention	FALSE	canonical	3	773	junction_6	73.718767945516	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102091026	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.26	chr7	+	2869	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-56	243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	233.670071729662	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091033	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.28	chr7	+	3085	20	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-56	245	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	293.770558896289	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTACTAAACTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	102091033	102118134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102091482_102091547_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.3	chr7	+	3174	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	-7	830	-7	259	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCATCTATTATCATAC	NA	False	NA	NA	False	AATAAA	-29	NA	102090894	102118148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.30	chr7	+	4262	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-54	-198	intron_retention	FALSE	canonical	3	773	junction_6	73.718767945516	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAAAGGCCTTATTCTG	NA	False	NA	NA	False	NA	NA	NA	102091035	102118780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.34	chr7	+	3006	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-39	245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	226.838286064525	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTACTAAACTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	102091050	102118134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110905_102112864_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.37	chr7	+	2992	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-22	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	225.518223511543	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102091067	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095944_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.38	chr7	+	5536	17	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-14	243	intron_retention	FALSE	canonical	3	773	junction_6	75.9761218656888	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091075	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.39	chr7	+	2949	19	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	20	242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	226.825407377786	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTGGTACTAAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	102091109	102118131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106854_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.4	chr7	+	4736	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	-4	-735	-4	735	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTCTTATTTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	102090897	102119713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.40	chr7	+	2837	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	37	243	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	232.209352505457	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102091126	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.41	chr7	+	4764	15	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	4606	242	intron_retention	FALSE	canonical	3	773	junction_4	82.6738119580407	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGTGGTACTAAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	102095855	102118131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102110059_102110813_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.42	chr7	+	2536	16	ISM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	6105	846	5757	243	3prime_fragment	FALSE	canonical	3	773	junction_3	78.3993764147536	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102097006	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.43	chr7	+	2553	16	NNC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	5767	241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	244.476165618564	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102097016	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110088_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.5	chr7	+	5905	16	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-4	243	intron_retention	FALSE	canonical	3	773	junction_6	71.0181823353866	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTACTAAACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	102090897	102118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102108798_102109497_102109648_102109836_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.7	chr7	+	3789	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	88	120	88	-120	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTCCTGGTCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	102090989	102118858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31567.9	chr7	+	4803	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	-93	241	intron_retention	FALSE	canonical	3	773	junction_6	76.9837532853277	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGTGGTACTAAACT	NA	False	NA	NA	False	AATAAA	-11	NA	102090996	102118130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ES.31568.1	chr7	-	3381	2	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCCCACAAAAATGCAGA	1517	False	NA	NA	False	NA	NA	NA	102098725	102091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102092283_102095756
ES.31568.2	chr7	-	6855	1	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCCCACAAAAATGCAGA	1517	False	NA	NA	False	NA	NA	NA	102098725	102091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102091900_102098700
ES.31568.3	chr7	-	6278	2	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCCCACAAAAATGCAGA	1517	False	NA	NA	False	NA	NA	NA	102098725	102091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102096904_102097480
ES.31568.4	chr7	-	5759	2	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1517	False	NA	NA	False	NA	NA	NA	102098725	102091893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102095934_102097006
ES.31568.5	chr7	-	5146	2	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCATGAAAATAGTTGCA	1517	False	NA	NA	False	NA	NA	NA	102098725	102093002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102096904_102097480
ES.31568.6	chr7	-	1938	2	Antisense	novelGene_ENSMUSG00000030978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCAAGGCCAGCTTTGG	1517	False	NA	NA	False	NA	NA	NA	102098725	102096206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_102096907_102097487
ES.31569.1	chr7	-	307	1	Intergenic	novelGene_25883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTACACTCTTCT	9377	False	NA	NA	False	NA	NA	NA	102107391	102107084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_102107100_102107400
ES.3157.1	chr10	-	4293	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	229	0	-22	0	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCTCGTGATTCCT	NA	False	NA	NA	False	NA	NA	NA	76304719	76295400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.3157.2	chr10	-	4306	6	NNC	ENSMUSG00000033126.6	novel	4522	5	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.3168624434969	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTCTCTCGTGATTC	NA	False	NA	NA	False	NA	NA	NA	76304630	76295402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76299154_76300090_76300160_76302070_76302200_76303339_76303444_76303990_76304221_76304607
ES.3157.3	chr10	-	4095	4	NIC	ENSMUSG00000033126.6	novel	4522	5	NA	NA	45	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.6799946709291	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTCTCTCGTGATTC	NA	False	NA	NA	False	NA	NA	NA	76304652	76295402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76299154_76300090_76300160_76303990_76304221_76304607
ES.3157.4	chr10	-	3825	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	279	418	28	-418	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCCCAAAGAGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	76304669	76295818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.3157.5	chr10	-	3611	4	NIC	ENSMUSG00000033126.6	novel	4522	5	NA	NA	6	-424	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	13.7679176187089	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTAATAGCCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	76304691	76295824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76299154_76300090_76300160_76302070_76302200_76304607
ES.3157.6	chr10	-	3663	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	287	572	36	-572	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTGCCTGTGTGTAT	NA	False	NA	NA	False	TATAAA	-15	NA	76304661	76295972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.3157.7	chr10	-	2620	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	288	1614	37	-1614	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGAGTACACTGTA	NA	False	NA	NA	False	NA	NA	NA	76304660	76297014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.3157.8	chr10	-	1606	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	319	2597	68	-2597	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	76304629	76297997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.3157.9	chr10	-	1211	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	287	3024	36	-3024	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGCTCTTGTGCTTCTTT	NA	False	NA	NA	False	AAGAAA	-4	NA	76304661	76298424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ES.31570.1	chr7	+	215	1	Intergenic	novelGene_25884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	102127866	102128081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_102127900_102128100
ES.31571.1	chr7	-	5518	5	NIC	ENSMUSG00000030966.14	novel	2682	7	NA	NA	18	0	intron_retention	FALSE	canonical	3	12	junction_2	2.54950975679639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTCTTTCATTCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	102214675	102207128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_102208871_102209174_102211226_102212472_102212569_102212900_102213333_102213478
ES.31571.2	chr7	-	3803	7	ISM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	36	2	-4	-1	intron_retention	FALSE	canonical	3	11	junction_3	2.7938424357067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCTTCTTTCATTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	102214657	102207129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478
ES.31571.3	chr7	-	3168	7	ISM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	-12	685	-12	-684	intron_retention	FALSE	canonical	3	11	junction_3	2.7938424357067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	102214705	102207812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478
ES.31571.4	chr7	-	2065	7	NNC	ENSMUSG00000030966.14	novel	2793	8	NA	NA	-3	-684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.31576510716547	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	102214656	102207812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_102208871_102209174_102209276_102210977_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
ES.31571.5	chr7	-	2106	8	FSM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	2	685	2	-684	multi-exon	FALSE	canonical	3	11	junction_3	2.61861468283191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	102214691	102207812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
ES.31572.1	chr7	-	179	1	Intergenic	novelGene_25885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	102275418	102275239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_102275200_102275400
ES.31573.1	chr7	-	3597	6	NIC	ENSMUSG00000073968.5	novel	2388	7	NA	NA	1	2	intron_retention	FALSE	canonical	2	5	junction_5	1.32664991614216	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACGAGTCTGCCTGTC	NA	False	NA	NA	False	ATTAAA	-30	NA	102336476	102326786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102330966_102333254_102333719_102336347
ES.31573.2	chr7	-	5880	5	NIC	ENSMUSG00000073968.5	novel	2388	7	NA	NA	5	0	intron_retention	FALSE	canonical	2	5	junction_4	1.4790199457749	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCACGAGTCTGCCTG	NA	False	NA	NA	False	ATTAAA	-28	NA	102336472	102326788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102333719_102336347
ES.31573.3	chr7	-	1915	6	ISM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	3097	5	2970	2	3prime_fragment	FALSE	canonical	2	7	junction_1	0.8	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCACAGATCACGAGTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	102333437	102326793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254
ES.31573.4	chr7	-	4508	2	ISM	ENSMUSG00000073968.5	ENSMUST00000210855.2	2301	6	4976	0	-2935	0	intron_retention	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCCACAGATCACGAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	102331501	102326795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_102328045_102328242
ES.31574.1	chr7	-	3942	1	Intergenic	novelGene_25886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACCAAC	NA	False	NA	NA	False	NA	NA	NA	102660487	102656545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_102656500_102660500
ES.31574.2	chr7	-	2516	2	Intergenic	novelGene_25887	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102662792	102658685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_102661017_102662607
ES.31575.1	chr7	+	2460	2	FSM	ENSMUSG00000058976.5	ENSMUST00000079348.4	1697	2	-57	-706	-57	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTGTCTGCTTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	103065845	103069087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103065953_103066734
ES.31576.1	chr7	-	492	1	FSM	ENSMUSG00000083854.4	ENSMUST00000120890.2	351	1	-123	-18	-123	18	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATTAGTCTACTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	103532334	103531842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_103531800_103532300
ES.31577.1	chr7	+	3541	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-2	-244	intron_retention	FALSE	canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTTCTTACTCTGTAG	NA	False	NA	17	True	AATAAA	-18	NA	103867997	103884115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.10	chr7	+	1509	3	FSM	ENSMUSG00000072244.12	ENSMUST00000144538.2	1490	3	0	-19	0	19	multi-exon	FALSE	canonical	3	703	junction_1	31	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGGAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103867999	103876959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103868091_103874713_103875188_103876015
ES.31577.100	chr7	+	3848	2	ISM	ENSMUSG00000090215.10	ENSMUST00000180136.2	1535	7	3902	-862	3902	570	intron_retention	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTAGTTTGTCTTCCT	NA	False	NA	NA	False	TATAAA	-15	NA	103982579	103986686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_103984596_103984854
ES.31577.11	chr7	+	2830	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	0	-1046	intron_retention	TRUE	non_canonical	0	0	junction_9	314.822701426268	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGATTGTAGCTTT	NA	False	NA	11	True	AATAAA	-16	NA	103867999	103883313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103870411_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882766_103882812
ES.31577.12	chr7	+	3868	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	0	-248	intron_retention	FALSE	canonical	0	0	junction_1	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103867999	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103868457_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.13	chr7	+	3429	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	5	-251	intron_retention	FALSE	canonical	0	0	junction_2	310.757008557083	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868006	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.15	chr7	+	3529	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	8	-247	intron_retention	TRUE	non_canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868009	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882795_103882837
ES.31577.17	chr7	+	3713	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	9	-251	intron_retention	FALSE	canonical	0	0	junction_4	343.497839050115	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868010	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103870411_103870506_103874713_103875188_103876015_103876112_103877254_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.18	chr7	+	4789	7	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	9	-248	intron_retention	FALSE	canonical	0	0	junction_6	272.383716269693	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868010	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103881097_103881319_103882780_103882825
ES.31577.19	chr7	+	3607	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	10	-247	intron_retention	FALSE	canonical	0	0	junction_9	315.124353271358	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868011	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103870422_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.2	chr7	+	3631	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-2	-248	intron_retention	TRUE	canonical	0	0	junction_9	314.822701426268	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103867997	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103870411_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.20	chr7	+	3819	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	10	-2	10	2	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGACTTGAAGGTGCATC	NA	False	NA	NA	False	AATAAA	-20	NA	103868011	103884361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.21	chr7	+	2630	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	10	-1045	intron_retention	FALSE	canonical	0	0	junction_2	310.757008557083	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGATTGTAGCTTTG	NA	False	NA	12	True	AATAAA	-17	NA	103868011	103883314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.22	chr7	+	1275	4	NNC	ENSMUSG00000072244.12	novel	1490	3	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	346.935472706701	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103868011	103876938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876366_103876566
ES.31577.23	chr7	+	1369	5	NNC	ENSMUSG00000072244.12	novel	1490	3	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	326.47004073881	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103868011	103876938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103870411_103870506_103874713_103875188_103876015_103876366_103876566
ES.31577.24	chr7	+	1239	4	NNC	ENSMUSG00000072244.12	novel	1490	3	NA	NA	10	19	intron_retention	FALSE	non_canonical	0	0	junction_3	346.935472706701	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGGAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103868011	103876959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876427_103876684
ES.31577.25	chr7	+	3462	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	10	-249	intron_retention	FALSE	non_canonical	0	0	junction_8	289.227323129134	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868011	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103881943_103882002_103882780_103882825
ES.31577.26	chr7	+	3746	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	15	-248	intron_retention	FALSE	non_canonical	0	0	junction_7	256.166081331018	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868016	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103882741_103882785
ES.31577.27	chr7	+	2710	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	21	-1045	intron_retention	FALSE	non_canonical	0	0	junction_2	332.209271393801	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGATTGTAGCTTTG	NA	False	NA	12	True	AATAAA	-17	NA	103868022	103883314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875181_103876010_103876100_103877343_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.28	chr7	+	2643	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	21	-1040	intron_retention	TRUE	non_canonical	0	0	junction_8	289.227323129134	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTAGCTTTGGTTTT	NA	False	NA	17	True	AATAAA	-22	NA	103868022	103883319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103881639_103881716_103882755_103882799
ES.31577.29	chr7	+	3495	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	21	-249	intron_retention	FALSE	canonical	0	0	junction_6	319.517237885724	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868022	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881108_103881573_103882780_103882825
ES.31577.3	chr7	+	3581	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	-3	249	-1	-249	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103867998	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.30	chr7	+	3514	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	21	-249	intron_retention	TRUE	non_canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868022	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882770_103882812
ES.31577.31	chr7	+	2567	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	963	intron_retention	FALSE	canonical	0	0	junction_8	239.859203492382	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGCATTCTTTGTTA	NA	False	NA	NA	False	TATAAA	-12	NA	103868024	103883168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.32	chr7	+	3737	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-249	intron_retention	TRUE	non_canonical	0	0	junction_7	256.166081331018	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868024	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103882757_103882801
ES.31577.33	chr7	+	4775	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-251	intron_retention	TRUE	non_canonical	0	0	junction_3	324.364370574142	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868024	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876366_103876566_103877584_103879934_103879958_103880995_103881097_103881319_103882744_103882788
ES.31577.34	chr7	+	3742	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-1045	intron_retention	FALSE	non_canonical	0	0	junction_3	248.881415906599	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGATTGTAGCTTTG	NA	False	NA	12	True	AATAAA	-17	NA	103868024	103883314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876427_103876684_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.35	chr7	+	3936	8	FSM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	23	-132	-19	132	multi-exon	FALSE	canonical	2	421	junction_3	109.572825470701	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATATGTGTTTGTATA	NA	False	NA	NA	False	TTTAAA	-17	NA	103868024	103884491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.36	chr7	+	2764	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-994	intron_retention	FALSE	canonical	0	0	junction_8	239.859203492382	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTCAGCATAAAATTTTA	NA	False	NA	63	True	AATAAA	-18	NA	103868024	103883365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.38	chr7	+	2111	3	NNC	ENSMUSG00000072244.12	novel	1490	3	NA	NA	-19	19	intron_retention	FALSE	non_canonical	0	0	junction_2	351.5	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGGAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	103868024	103876959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103876366_103876566
ES.31577.39	chr7	+	3782	7	ISM	ENSMUSG00000072244.12	ENSMUST00000098180.10	3827	8	23	249	-19	-249	intron_retention	FALSE	canonical	2	421	junction_3	115.957846747093	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868024	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319
ES.31577.4	chr7	+	3535	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-1	-251	intron_retention	TRUE	non_canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103867998	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882788_103882831
ES.31577.40	chr7	+	3507	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-250	intron_retention	FALSE	non_canonical	0	0	junction_4	301.194628241661	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATGGAGTCTTCTTACT	NA	False	NA	11	True	AATAAA	-12	NA	103868024	103884109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877590_103880979_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.41	chr7	+	2717	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-1045	intron_retention	TRUE	non_canonical	0	0	junction_8	239.859203492382	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGATTGTAGCTTTG	NA	False	NA	12	True	AATAAA	-17	NA	103868024	103883314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882771_103882812
ES.31577.42	chr7	+	3505	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-251	intron_retention	FALSE	canonical	0	0	junction_3	304.950995038547	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868024	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876116_103877358_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.43	chr7	+	3504	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-19	-251	intron_retention	FALSE	non_canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868024	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882739_103882787
ES.31577.44	chr7	+	3431	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-18	-249	intron_retention	TRUE	non_canonical	0	0	junction_8	289.227323129134	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868025	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103881639_103881716_103882766_103882810
ES.31577.46	chr7	+	3505	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-15	-246	intron_retention	FALSE	non_canonical	0	0	junction_3	304.950995038547	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTCTTCTTACTCTGT	NA	False	NA	15	True	AATAAA	-16	NA	103868028	103884113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876100_103877343_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.5	chr7	+	3332	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-1	-248	intron_retention	TRUE	non_canonical	0	0	junction_8	289.227323129134	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103867998	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882813_103882857_103883765_103883969
ES.31577.50	chr7	+	3247	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-3	-251	intron_retention	FALSE	canonical	0	0	junction_3	326.767255865965	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868040	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876116_103877354_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103881854_103882099_103882780_103882825
ES.31577.51	chr7	+	2576	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	4	772	intron_retention	FALSE	canonical	0	0	junction_7	254.204320841904	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTTCTCTAGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	103868047	103882977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881347_103881573_103882780_103882825
ES.31577.54	chr7	+	4516	6	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	5	-248	intron_retention	FALSE	canonical	0	0	junction_3	342.011110930625	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868048	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103879934_103881347_103881573_103882780_103882825
ES.31577.55	chr7	+	4770	7	NIC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	8	-248	intron_retention	FALSE	canonical	3	602	junction_6	57.4033003309817	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868051	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_103868091_103874713_103875188_103876015_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.57	chr7	+	3679	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-124	-246	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTCTTCTTACTCTGT	NA	False	NA	15	True	AATAAA	-16	NA	103868511	103884113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.58	chr7	+	3614	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-63	-249	intron_retention	FALSE	non_canonical	0	0	junction_7	317.290088089748	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868572	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881343_103881573_103882795_103882837
ES.31577.59	chr7	+	3825	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	4	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTTGAAGGTGCATCTG	NA	False	NA	NA	False	AATAAA	-22	NA	103868615	103884363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.60	chr7	+	3575	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-20	-249	intron_retention	TRUE	non_canonical	0	0	junction_8	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868615	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882815_103882857
ES.31577.61	chr7	+	3573	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-19	-251	intron_retention	FALSE	canonical	0	0	junction_3	322.606934790621	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868616	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876116_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.62	chr7	+	3438	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-247	intron_retention	TRUE	non_canonical	0	0	junction_8	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868617	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882678_103882857
ES.31577.63	chr7	+	2751	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-1001	intron_retention	TRUE	non_canonical	0	0	junction_4	300.83584241515	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAGCCTTCAGCATAA	NA	False	NA	56	True	AATAAA	-11	NA	103868617	103883358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103880995_103881097_103881319_103881347_103881573_103882748_103882837
ES.31577.65	chr7	+	1325	4	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_3	336.806901486429	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103868617	103876940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876366_103876566
ES.31577.66	chr7	+	3572	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-249	intron_retention	TRUE	non_canonical	0	0	junction_8	276.31221018985	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868617	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882787_103882830
ES.31577.67	chr7	+	5329	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-251	intron_retention	FALSE	canonical	0	0	junction_8	293.091282708988	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103868617	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.68	chr7	+	3653	10	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-249	intron_retention	FALSE	canonical	0	0	junction_9	315.730546158869	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868617	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103870422_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.69	chr7	+	3565	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-255	intron_retention	TRUE	non_canonical	0	0	junction_4	300.83584241515	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCAGGATGGAGTCTTC	NA	False	NA	6	True	AATAAA	-7	NA	103868617	103884104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877590_103880980_103881097_103881319_103881347_103881573_103882780_103882822
ES.31577.7	chr7	+	3791	9	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-1	7	intron_retention	FALSE	canonical	0	0	junction_8	239.859203492382	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGGTGCATCTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	103867998	103884366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.70	chr7	+	3564	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-247	intron_retention	FALSE	canonical	0	0	junction_4	300.83584241515	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868617	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103880980_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.71	chr7	+	3475	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-248	intron_retention	FALSE	canonical	0	0	junction_2	320.152960891114	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868617	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.72	chr7	+	4825	10	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-18	-249	intron_retention	TRUE	canonical	0	0	junction_4	309.509687915549	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103868617	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877907_103878925_103879366_103879442_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.73	chr7	+	3526	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-17	-247	intron_retention	FALSE	canonical	1	1	junction_1	250.729710555215	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868618	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868654_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.74	chr7	+	3568	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-17	-248	intron_retention	FALSE	canonical	0	0	junction_3	322.606934790621	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103868618	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876116_103877358_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.76	chr7	+	3855	8	NIC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-12	-4	intron_retention	FALSE	canonical	2	115	junction_1	215.402423574185	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGGGAGACTTGAAGG	NA	False	NA	NA	False	AATAAA	-14	NA	103868623	103884355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.77	chr7	+	3707	10	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-11	-247	intron_retention	FALSE	canonical	0	0	junction_1	316.187707962638	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103868624	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868804_103870422_103870506_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.78	chr7	+	5051	6	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-7	-246	intron_retention	TRUE	non_canonical	0	0	junction_5	317.849398300516	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTCTTCTTACTCTGT	NA	False	NA	15	True	AATAAA	-16	NA	103868628	103884113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103882760_103882804
ES.31577.79	chr7	+	2434	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	-1	786	intron_retention	FALSE	canonical	0	0	junction_8	276.31221018985	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTGAGATACTTGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	103868634	103882991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868745_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.8	chr7	+	3351	10	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-1	-251	intron_retention	FALSE	canonical	0	0	junction_8	289.227323129134	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGGAGTCTTCTTAC	NA	False	NA	10	True	AATAAA	-11	NA	103867998	103884108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103881639_103881820_103882780_103882825
ES.31577.80	chr7	+	3784	9	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	552	-247	intron_retention	FALSE	canonical	0	0	junction_1	298.112159052596	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	NA	False	NA	14	True	AATAAA	-15	NA	103869187	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103869527_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.81	chr7	+	3820	8	NNC	ENSMUSG00000072244.12	novel	1506	8	NA	NA	560	-249	intron_retention	FALSE	canonical	0	0	junction_1	251.045649966987	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	NA	False	NA	12	True	AATAAA	-13	NA	103869195	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103869527_103874713_103875188_103876015_103876112_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573
ES.31577.82	chr7	+	3401	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	45	-248	intron_retention	TRUE	non_canonical	0	0	junction_2	317.615413700923	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	3809	False	NA	13	True	AATAAA	-14	NA	103874758	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103875188_103876015_103876111_103877352_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882750_103882792
ES.31577.83	chr7	+	3282	7	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	173	-246	intron_retention	TRUE	non_canonical	0	0	junction_3	305.554550503398	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTCTTCTTACTCTGT	3937	False	NA	15	True	AATAAA	-16	NA	103874886	103884113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103875188_103876015_103876112_103877352_103877613_103880995_103881097_103881319_103881347_103881573_103882783_103882825
ES.31577.84	chr7	+	2975	7	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	1302	-246	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	321.765140367249	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGTCTTCTTACTCTGT	5066	False	NA	15	True	AATAAA	-16	NA	103876015	103884113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103876105_103877346_103877584_103879934_103879958_103880995_103881097_103881319_103881347_103881573_103882739_103882780
ES.31577.85	chr7	+	3706	5	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	2029	-249	intron_retention	FALSE	canonical	0	0	junction_4	300.401398132565	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGTCTTCTTACTC	5793	False	NA	12	True	AATAAA	-13	NA	103876742	103884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103877584_103879934_103879958_103880995_103881347_103881573_103882780_103882825
ES.31577.86	chr7	+	4164	3	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	4966	-248	intron_retention	TRUE	non_canonical	0	0	junction_2	328.5	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	8730	False	NA	13	True	AATAAA	-14	NA	103879679	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103881097_103881319_103882748_103882792
ES.31577.87	chr7	+	3666	2	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	5687	-247	intron_retention	FALSE	canonical	0	0	junction_1	0	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTCTTACTCTG	9451	False	NA	14	True	AATAAA	-15	NA	103880400	103884112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103882780_103882825
ES.31577.88	chr7	+	2697	7	Fusion	ENSMUSG00000056144.15_ENSMUSG00000072244.12	novel	3827	8	NA	NA	6871	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	6.62696511735701	728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAATCTGTTCAT	NA	False	NA	6	True	ATTAAA	-14	NA	103881584	103911440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_103881854_103896737_103897358_103897893_103897990_103898601_103898843_103909324_103909426_103909684_103909712_103910097
ES.31577.9	chr7	+	3528	8	NNC	ENSMUSG00000072244.12	novel	3827	8	NA	NA	-1	-248	intron_retention	FALSE	canonical	0	0	junction_4	301.194628241661	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGAGTCTTCTTACTCT	NA	False	NA	13	True	AATAAA	-14	NA	103867998	103884111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103868091_103874713_103875188_103876015_103876112_103877352_103877584_103880980_103881097_103881319_103881347_103881573_103882780_103882825
ES.31577.90	chr7	+	4739	1	Intergenic	novelGene_25891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCTTTTGAGTTCGTG	NA	False	NA	NA	False	AATAAA	-9	NA	103888685	103893424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_103888700_103893400
ES.31577.91	chr7	+	2560	7	NNC	ENSMUSG00000056144.15	novel	2590	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_6	5.85946527708232	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAATCTGTTCAT	NA	False	NA	6	True	ATTAAA	-14	NA	103893695	103911440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909454_103910097
ES.31577.92	chr7	+	2507	8	FSM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	82	1	48	-1	multi-exon	FALSE	canonical	1	1	junction_3	5.3642809587196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAATCTGTTCAT	NA	False	NA	6	True	ATTAAA	-14	NA	103893747	103911440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ES.31577.93	chr7	+	3323	7	Fusion	ENSMUSG00000056144.15_ENSMUSG00000090215.10	novel	1827	7	NA	NA	48	697	intron_retention	TRUE	canonical	0	0	junction_1	5.14511634681104	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTAATCTGTTCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	103893747	103986813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_103893800_103978554_103979175_103979709_103980661_103983791_103983815_103984494_103984596_103984854_103984882_103985264
ES.31577.94	chr7	+	2477	7	NIC	ENSMUSG00000056144.15	novel	2590	8	NA	NA	61	5	intron_retention	FALSE	canonical	0	0	junction_4	6.01156293229048	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTGTTCATTTATAT	NA	False	NA	12	True	ATTAAA	-20	NA	103893760	103911446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103909324_103909426_103909684_103909712_103910097
ES.31577.95	chr7	+	2470	8	FSM	ENSMUSG00000056144.15	ENSMUST00000106849.9	2578	8	106	2	70	-2	multi-exon	FALSE	canonical	1	1	junction_3	5.31843156256751	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAATTGAATCTGTTCA	NA	False	NA	5	True	ATTAAA	-13	NA	103893769	103911439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_103893800_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ES.31577.97	chr7	+	2443	7	ISM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	3070	1	3036	-1	3prime_fragment	FALSE	canonical	1	1	junction_2	5.74456264653803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAATCTGTTCAT	NA	False	NA	6	True	ATTAAA	-14	NA	103896735	103911440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ES.31577.98	chr7	+	1517	4	NNC	ENSMUSG00000056144.15	novel	2578	8	NA	NA	12161	-1	intron_retention	FALSE	canonical	1	1	junction_1	5.31245915016974	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAATCTGTTCAT	NA	False	NA	6	True	ATTAAA	-14	NA	103905860	103911440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103905907_103909324_103909426_103909684_103909712_103910097
ES.31577.99	chr7	+	3063	3	NNC	ENSMUSG00000056144.15	novel	2578	8	NA	NA	14250	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAATCTGTTCATT	NA	False	NA	7	True	ATTAAA	-15	NA	103907949	103911441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_103908187_103908356_103909426_103909684
ES.31578.1	chr7	-	341	1	Intergenic	novelGene_25888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCAGTGGTGCCCCAC	9401	False	NA	NA	False	NA	NA	NA	103872667	103872326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103872300_103872700
ES.31578.2	chr7	-	155	2	Antisense	novelGene_ENSMUSG00000072244.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	9402	False	NA	NA	False	NA	NA	NA	103872666	103872347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_103872418_103872581
ES.31578.3	chr7	-	1261	1	Intergenic	novelGene_25889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTCCAATAGTTTACAT	9408	False	NA	NA	False	NA	NA	NA	103873705	103872444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103872400_103873700
ES.31579.1	chr7	-	4714	3	Intergenic	novelGene_25890	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGTCTAAGTATGGTT	NA	False	NA	NA	False	NA	NA	NA	103892954	103887014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103891376_103892068_103892127_103892659
ES.3158.1	chr10	-	10220	1	Antisense	novelGene_ENSMUSG00000001150.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTGCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	76333175	76322955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_76323000_76333200
ES.3158.2	chr10	-	2298	1	Antisense	novelGene_ENSMUSG00000001150.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTACCCCATTAAAGCA	NA	False	NA	NA	False	AATAAA	-42	NA	76333175	76330877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_76330900_76333200
ES.31580.1	chr7	-	6152	1	Intergenic	novelGene_25892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	103906302	103900150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103900200_103906300
ES.31581.1	chr7	-	298	1	Intergenic	novelGene_25893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTGGTGCCCTTTTC	NA	False	NA	NA	False	NA	NA	NA	103907030	103906732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103906700_103907000
ES.31581.2	chr7	-	97	1	Intergenic	novelGene_25894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGGTGCCCTATG	NA	False	NA	NA	False	NA	NA	NA	103907028	103906931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103906900_103907000
ES.31582.1	chr7	-	3616	8	NNC	ENSMUSG00000060441.16	novel	3655	8	NA	NA	-71	0	intron_retention	FALSE	canonical	0	0	junction_1	0.349927106111883	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCAACCTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	103937372	103912592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103915173_103915416_103915444_103915675_103915774_103923979_103924003_103925812_103926044_103927622_103927719_103928519_103928996_103937287
ES.31582.2	chr7	-	2638	8	FSM	ENSMUSG00000060441.16	ENSMUST00000098179.9	3655	8	-96	1113	-96	868	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACGAAAGAAAGAACGAAA	NA	False	NA	NA	False	NA	NA	NA	103937397	103913705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_103915173_103915416_103915444_103915675_103915774_103923979_103924003_103925812_103926044_103927622_103927719_103928519_103928996_103937177
ES.31583.1	chr7	-	178	1	Intergenic	novelGene_25895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACCTTA	NA	False	NA	NA	False	NA	NA	NA	103986496	103986318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_103986300_103986500
ES.31584.1	chr7	-	3613	9	NNC	ENSMUSG00000057143.16	novel	3740	8	NA	NA	-41	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.93649167310371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCAACCTTTTCTT	NA	False	NA	-1	True	AATAAA	-15	NA	104002610	103987960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989000_103989057_103990581_103990825_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.10	chr7	-	2525	8	FSM	ENSMUSG00000057143.16	ENSMUST00000130139.3	2484	8	-75	34	-51	-34	multi-exon	FALSE	canonical	0	0	junction_3	1.9059520091609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AAGAAA	-42	NA	104002620	103989116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_103990581_103990825_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.2	chr7	-	4042	8	NNC	ENSMUSG00000057143.16	novel	2484	8	NA	NA	-51	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	2.12852348939305	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCCAACCTTTTCT	NA	False	NA	-2	True	AATAAA	-14	NA	104002620	103987961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989058_103989117_103989180_103989234_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.3	chr7	-	8145	4	NNC	ENSMUSG00000057143.16	novel	2484	8	NA	NA	-17	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCCAACCTTTTCT	NA	False	NA	-2	True	AATAAA	-14	NA	104002586	103987961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989008_103989068_103994337_103995855_103997611_104002510
ES.31584.4	chr7	-	3852	8	NNC	ENSMUSG00000057143.16	novel	2484	8	NA	NA	-19	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	2.0303814862217	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCCAACCTTTTCT	NA	False	NA	-2	True	AATAAA	-14	NA	104002588	103987961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989048_103989088_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.5	chr7	-	3840	8	NNC	ENSMUSG00000057143.16	novel	2484	8	NA	NA	-24	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	2.0303814862217	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCCAACCTTTTCT	NA	False	NA	-2	True	AATAAA	-14	NA	104002593	103987961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989058_103989115_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.6	chr7	-	1173	2	NNC	ENSMUSG00000057143.16	novel	3740	8	NA	NA	13358	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCTGTCCAACCTTTTC	NA	False	NA	-3	True	AATAAA	-13	NA	103989187	103987962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989016_103989067
ES.31584.7	chr7	-	3224	4	NNC	ENSMUSG00000057143.16	novel	3740	8	NA	NA	8401	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCTGTCCAACCTTTT	NA	False	NA	-4	True	AATAAA	-12	NA	103994144	103987963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989036_103989092_103991183_103992262_103992286_103994105
ES.31584.8	chr7	-	3588	9	NNC	ENSMUSG00000057143.16	novel	2484	8	NA	NA	-17	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.93649167310371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCTGTCCAACCTTTT	NA	False	NA	-4	True	AATAAA	-12	NA	104002586	103987963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989020_103989075_103990581_103990825_103990853_103991084_103991183_103992262_103992286_103994105_103994337_103995855_103995952_103997134_103997611_104002510
ES.31584.9	chr7	-	1074	2	NNC	ENSMUSG00000057143.16	novel	3740	8	NA	NA	13336	-117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTCCATTATGTTTT	NA	False	NA	NA	False	AATATA	-8	NA	103989209	103988077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_103989000_103989057
ES.31585.1	chr7	+	1400	1	Intergenic	novelGene_25896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAGATGGAAAGATCTC	NA	False	NA	NA	False	NA	NA	NA	104073509	104074909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_104073500_104074900
ES.31586.1	chr7	-	158	1	ISM	ENSMUSG00000051182.6	ENSMUST00000216750.2	2010	2	6207	79	1642	-79	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	104244744	104244586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_104244600_104244700
ES.31587.1	chr7	+	179	1	Intergenic	novelGene_25897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGTAAAGGAATAATCT	2991	False	NA	NA	False	NA	NA	NA	104291298	104291477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_104291300_104291500
ES.31588.1	chr7	-	1333	1	Intergenic	novelGene_25898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTAAGGGAGAAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	104482629	104481296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_104481300_104482600
ES.31589.1	chr7	-	2666	1	Genic_Genomic	ENSMUSG00000062369.3	novel	NA	NA	NA	NA	22	341	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAATCCTTGTCGTCTTC	NA	False	NA	NA	False	AATAAA	-11	NA	104491788	104489122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_104489100_104491800
ES.3159.1	chr10	+	3267	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	-142	1542	-123	704	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTCCTGAGACATTT	NA	False	NA	9	True	AATAAA	-17	NA	76367298	76389771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.10	chr10	+	6178	21	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-1	1	intron_retention	FALSE	canonical	2	7	junction_14	51.7483091511211	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCTTCCTTTTGCAT	NA	False	NA	11	True	AATAAA	-18	NA	76367439	76392973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.11	chr10	+	3118	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	1	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.01311158572	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTCCTGAGACAT	NA	False	NA	7	True	AATAAA	-15	NA	76367441	76389769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377757_76379666_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.12	chr10	+	3660	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	2	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.4281901978219	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTCCTGAGACAT	NA	False	NA	7	True	AATAAA	-15	NA	76367442	76389769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76380754_76381336_76381895_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.13	chr10	+	4548	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	2	-57	intron_retention	FALSE	canonical	0	0	junction_20	65.7405744517927	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCTGTTTTCTCATGA	NA	False	NA	NA	False	AATAAA	-8	NA	76367442	76391256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76386521_76388153_76388233_76388770
ES.3159.14	chr10	+	2497	23	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	2	680	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	50.1295017145469	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367442	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770_76388948_76389549
ES.3159.15	chr10	+	6281	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	2	-1	intron_retention	FALSE	canonical	3	18	junction_3	46.0596084258721	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTCTTCCTTTTGC	NA	False	NA	9	True	AATAAA	-16	NA	76367442	76392971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371434_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.16	chr10	+	7657	19	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-2	-41	intron_retention	FALSE	canonical	0	0	junction_1	55.0585546890258	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCTGTTTTAACAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	76367443	76391272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367505_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.17	chr10	+	2875	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	5	1787	0	459	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCGACTCCCTTACTAAA	NA	False	NA	NA	False	AATACA	-45	NA	76367445	76389526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.18	chr10	+	5219	20	NNC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	0	680	intron_retention	FALSE	canonical	2	4	junction_13	52.0878227058708	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367445	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381912_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.19	chr10	+	6288	22	NNC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	65.188719583972	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGTCTTCCTTTTGCA	NA	False	NA	10	True	AATAAA	-17	NA	76367447	76392972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371496_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386443_76386590_76388153_76388233_76388770
ES.3159.2	chr10	+	2998	21	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-7	701	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	51.7483091511211	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367414	76389768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.20	chr10	+	3074	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	5	680	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	51.0570353788585	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367450	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381912_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.22	chr10	+	3069	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	6	701	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	46.0596084258721	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367451	76389768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371434_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.24	chr10	+	6160	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	8	-41	intron_retention	FALSE	canonical	2	4	junction_14	52.2019875100556	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCTGTTTTAACAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	76367453	76391272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381912_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.25	chr10	+	5249	20	NIC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	8	701	intron_retention	FALSE	canonical	3	170	junction_8	27.250962523345	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367453	76389768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.26	chr10	+	4659	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	10	680	intron_retention	FALSE	canonical	2	4	junction_17	52.2226004714434	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367455	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.27	chr10	+	2506	18	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	10	680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	48.6799447844947	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367455	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367798_76375676_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.28	chr10	+	5295	20	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	10	702	intron_retention	FALSE	canonical	0	0	junction_17	54.2658889506208	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTCCTGAGACAT	NA	False	NA	7	True	AATAAA	-15	NA	76367455	76389769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76382046_76382596_76382694_76383268_76385120_76385636_76385718_76386470_76386590_76388153_76388233_76388770
ES.3159.29	chr10	+	8423	20	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	21	-1	intron_retention	FALSE	canonical	3	170	junction_9	28.7242116064127	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTCTTCCTTTTGC	NA	False	NA	9	True	AATAAA	-16	NA	76367466	76392971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.3	chr10	+	3128	22	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	1	680	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	51.0924643102782	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367422	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.31	chr10	+	6277	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_10	53.01311158572	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGTCTTCCTTTTGCA	NA	False	NA	10	True	AATAAA	-17	NA	76367485	76392972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377757_76379666_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.32	chr10	+	3754	20	NIC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	44	701	intron_retention	FALSE	canonical	3	170	junction_7	27.1066427855331	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367559	76389768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367853_76369346_76369486_76371392_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.33	chr10	+	6301	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	164	-1	intron_retention	FALSE	canonical	0	0	junction_3	85.3111217837393	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTCTTCCTTTTGC	NA	False	NA	9	True	AATAAA	-16	NA	76367679	76392971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367853_76369346_76369486_76371392_76371506_76372077_76372204_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381865_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388235_76388770
ES.3159.34	chr10	+	4397	20	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	1826	-47	intron_retention	FALSE	canonical	2	4	junction_15	50.0960849621191	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCATGATCTGTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	76369341	76391266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.35	chr10	+	4949	20	ISM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	1921	-534	1846	534	3prime_fragment	FALSE	canonical	3	170	junction_7	24.0326416990728	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGACATCCACTAT	NA	False	NA	NA	False	TATAAA	-23	NA	76369361	76391847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.36	chr10	+	4944	18	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	4572	1995	intron_retention	FALSE	canonical	1	1	junction_17	47.3137214272363	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGCTGAAAGCCCGGGA	NA	False	NA	NA	False	NA	NA	NA	76372087	76394967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770_76388948_76393393
ES.3159.37	chr10	+	2997	17	ISM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	6263	1545	-4012	701	3prime_fragment	FALSE	canonical	3	170	junction_4	14.8585781200625	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76373703	76389768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.38	chr10	+	4630	9	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	590	680	intron_retention	FALSE	canonical	3	180	junction_7	15.0975991468842	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76378305	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76378330_76379684_76379742_76380298_76380371_76381284_76382046_76382596_76383375_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.39	chr10	+	7970	10	NNC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	1322	-3	intron_retention	FALSE	canonical	2	2	junction_5	94.2024350292077	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTCAAGTCTTCCTTTT	NA	False	NA	7	True	AATAAA	-14	NA	76379037	76392969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76379742_76380298_76380371_76381284_76382046_76382596_76382694_76382837_76382899_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.4	chr10	+	6144	21	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_1	66.9546674997345	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCTTCCTTTTGCAT	NA	False	NA	11	True	AATAAA	-18	NA	76367424	76392973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367456_76367679_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.40	chr10	+	5179	12	NNC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	1984	1	intron_retention	FALSE	canonical	2	2	junction_6	77.3073719128138	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCTTCCTTTTGCAT	NA	False	NA	11	True	AATAAA	-18	NA	76379699	76392973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76382837_76382899_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.41	chr10	+	2613	3	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-1370	458	intron_retention	FALSE	canonical	3	180	junction_1	19.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCGACTCCCTTACTAA	NA	False	NA	NA	False	AATACA	-44	NA	76385673	76389525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76385718_76386418_76388233_76388770
ES.3159.5	chr10	+	5197	20	NNC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	7	680	intron_retention	FALSE	non_canonical	0	0	junction_1	68.6960465704136	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATATTAAAAACA	NA	False	NA	-15	True	NA	NA	NA	76367428	76389747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76367456_76367679_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76382046_76382596_76382694_76383268_76383384_76385053_76385120_76385636_76385718_76386418_76388233_76388770
ES.3159.6	chr10	+	3099	22	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	-6	725	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	50.7194944787643	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGAGTGTCTATGCTG	NA	False	NA	30	True	AATAAA	-38	NA	76367434	76389792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76367456_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.7	chr10	+	6335	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	-5	-1663	-5	4	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTCCTTTTGCATTTT	NA	False	NA	14	True	AATAAA	-21	NA	76367435	76392976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.3159.8	chr10	+	4630	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	-4	41	-4	-41	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCTGTTTTAACAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	76367436	76391272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ES.31590.1	chr7	-	213	1	Intergenic	novelGene_25899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAGTAAGGGA	NA	False	NA	NA	False	AATAAA	-19	NA	104598595	104598382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_104598400_104598600
ES.31591.1	chr7	+	1404	2	Intergenic	novelGene_25900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGTGGTCGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	104687374	104689665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_104687537_104688423
ES.31592.1	chr7	+	177	1	Intergenic	novelGene_25901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGTGTTAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	104877812	104877989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_104877800_104878000
ES.31593.1	chr7	+	1925	1	Intergenic	novelGene_25902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	104901548	104903473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_104901500_104903500
ES.31594.1	chr7	+	3723	6	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	CATAAA	-5	NA	105037397	105043128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762_105037846_105037981_105038143_105038458_105039098_105039225_105039560_105040783
ES.31594.2	chr7	+	5524	2	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-2	NA	105037397	105043125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762
ES.31594.3	chr7	+	4193	4	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAGAATGAAGATGGAA	NA	False	NA	NA	False	CATAAA	-23	NA	105037397	105043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762_105039098_105039225_105039560_105040783
ES.31594.4	chr7	+	5281	4	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAGAATGAAGATGGAA	NA	False	NA	NA	False	CATAAA	-23	NA	105037397	105043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762_105037846_105037981_105039098_105039225
ES.31594.5	chr7	+	4057	5	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAGAATGAAGATGGAA	NA	False	NA	NA	False	CATAAA	-23	NA	105037397	105043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762_105037846_105037981_105039098_105039225_105039560_105040783
ES.31594.6	chr7	+	4965	5	Antisense	novelGene_ENSMUSG00000044465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTAGAATGAAGATGGAA	NA	False	NA	NA	False	CATAAA	-23	NA	105037397	105043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_105037559_105037762_105037846_105037981_105038143_105038458_105039098_105039225
ES.31595.1	chr7	+	4640	6	FSM	ENSMUSG00000030897.6	ENSMUST00000033187.6	2484	6	-7	-2149	-7	2149	multi-exon	FALSE	canonical	1	1	junction_2	2.13541565040626	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTATATTTATTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	105053767	105060098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105053961_105054095_105054198_105054376_105054484_105054688_105055335_105056007_105056358_105056856
ES.31596.1	chr7	-	3370	14	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	2	66146	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	131.159553225706	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105049213	104954271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_104954903_105028022_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.10	chr7	-	4219	14	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-7	616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	128.903661104539	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGCTGCTGAGCCTAT	NA	False	NA	NA	False	NA	NA	NA	105049225	105027200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105041336_105041431_105049090
ES.31596.11	chr7	-	3598	12	NNC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-16	298	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	120.274891755415	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGCATCTCTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	105049277	105027518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049260
ES.31596.12	chr7	-	3560	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	-21	7314	-21	85	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTCTCTTTGGTGAA	NA	False	NA	75	True	GGGGCT	-44	NA	105049282	105027731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.13	chr7	-	5628	11	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-3	11	intron_retention	FALSE	canonical	3	88	junction_3	97.955295926254	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGCCACCCTTTA	NA	False	NA	1	True	TATAAA	-25	NA	105049221	105027805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.14	chr7	-	5680	11	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	0	10	intron_retention	FALSE	canonical	3	8	junction_2	124.07030265136	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCTTTGCCACCCTTT	NA	False	NA	0	True	TATAAA	-24	NA	105049209	105027806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.15	chr7	-	6024	11	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	2	8	intron_retention	FALSE	canonical	3	82	junction_10	113.441835316606	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTTCTTTGCCACCCT	NA	False	NA	-2	True	TATAAA	-22	NA	105049213	105027808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.16	chr7	-	3590	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCATTCTTCTTTGCCA	NA	False	NA	-6	True	TATAAA	-18	NA	105049260	105027812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.17	chr7	-	3515	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-71	-1	-19	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049280	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.18	chr7	-	3584	14	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	126.7878533745	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049261	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105043814_105043854_105049090
ES.31596.19	chr7	-	3824	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	82	junction_11	109.210464790856	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049224	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.2	chr7	-	4000	15	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	2	66146	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	128.153148973549	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105049213	104954271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_104954903_105015043_105015122_105028022_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.20	chr7	-	3303	12	NNC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	120.274891755415	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049280	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049260
ES.31596.21	chr7	-	3415	11	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	125.027396997618	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049260	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.22	chr7	-	3734	11	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	8	junction_2	121.127412256681	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049202	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
ES.31596.23	chr7	-	3394	13	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	120.107214835561	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049280	105027816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049260
ES.31596.24	chr7	-	3563	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	-41	-1	-19	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049280	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.25	chr7	-	3158	11	NIC	ENSMUSG00000044465.20	novel	2855	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	18	junction_3	118.681759339841	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049202	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
ES.31596.26	chr7	-	5678	11	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	83	junction_3	98.8387069927566	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049241	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.27	chr7	-	2755	11	NIC	ENSMUSG00000044465.20	novel	2855	12	NA	NA	-840	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	140.174177365162	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105039561	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227
ES.31596.28	chr7	-	3469	12	NNC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	121.31810518067	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049204	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049059
ES.31596.29	chr7	-	5984	10	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_2	126.75942023094	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049208	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
ES.31596.3	chr7	-	4836	2	Intergenic	novelGene_25903	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAATCTCTTTCCATC	NA	False	NA	NA	False	AATAAA	-26	NA	105012964	105006896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_105008885_105010116
ES.31596.30	chr7	-	7196	9	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-2233	0	intron_retention	FALSE	canonical	3	88	junction_3	106.164892384441	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105040954	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227
ES.31596.31	chr7	-	5689	11	NNC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	5	0	intron_retention	FALSE	canonical	1	4	junction_3	114.512706718512	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049234	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034134_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.32	chr7	-	2893	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	122.831184965382	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049204	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.33	chr7	-	3804	11	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	83	junction_4	99.153466908626	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049254	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
ES.31596.34	chr7	-	2852	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	3	0	-3	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049212	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.37	chr7	-	3922	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-20	0	intron_retention	FALSE	canonical	3	82	junction_11	109.746063014158	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049281	105027817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.38	chr7	-	3347	12	NNC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	120.810007247908	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049284	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049260
ES.31596.39	chr7	-	3768	11	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_4	98.3562911053482	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049261	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
ES.31596.4	chr7	-	10945	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-1	1	intron_retention	FALSE	canonical	3	82	junction_12	109.915118765952	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTGTTCACATCTCAGT	NA	False	NA	1	True	AATAAA	-17	NA	105049219	105020416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.40	chr7	-	5801	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	8	junction_2	130.118890326634	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049251	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.41	chr7	-	3459	12	NNC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	-5781	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	121.31810518067	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105055042	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105054906
ES.31596.42	chr7	-	2988	14	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	136.175009220101	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049219	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105043814_105043854_105049090
ES.31596.43	chr7	-	3415	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	130.530259941251	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049213	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.44	chr7	-	5710	10	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-2928	0	intron_retention	FALSE	canonical	3	8	junction_2	126.960866917311	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105041649	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227
ES.31596.45	chr7	-	3538	13	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	153.036193068466	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049219	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030582_105030785_105032987_105033780_105034194_105034359_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105041336_105041431_105049090
ES.31596.46	chr7	-	6093	10	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-23	0	intron_retention	FALSE	canonical	3	180	junction_3	83.8212383587835	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049284	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.47	chr7	-	3418	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	119.553784708041	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049204	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030582_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.48	chr7	-	3618	14	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.037427391801	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049253	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030603_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105043814_105043854_105049090
ES.31596.5	chr7	-	10844	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-4	-7397	2	-3	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGGTTGTTCACATCT	NA	False	NA	-3	True	AATAAA	-13	NA	105049213	105020420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.50	chr7	-	3848	13	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6	junction_11	126.179986086894	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049211	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105040783_105040875_105043814_105043854_105049090
ES.31596.51	chr7	-	5731	12	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	82	junction_11	113.390570540955	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049204	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.52	chr7	-	5716	9	NIC	ENSMUSG00000044465.20	novel	3443	12	NA	NA	-712	0	intron_retention	FALSE	canonical	3	83	junction_3	107.129302714057	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105039433	105027818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227
ES.31596.54	chr7	-	3391	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	47	7415	1	-14	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGGAAATCTCTATTCT	NA	False	NA	-26	True	NA	NA	NA	105049214	105027832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.55	chr7	-	1582	6	NNC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	2	2033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	148.851066506089	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGTATGGCTCTTAAACT	NA	False	NA	NA	False	NA	NA	NA	105049213	105037394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039638_105049090
ES.31596.56	chr7	-	2227	7	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	7	2030	intron_retention	FALSE	canonical	0	0	junction_6	175.195129308247	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGGGTATGGCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	105049202	105037397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105040783_105040875_105041336_105041431_105048854
ES.31596.6	chr7	-	3201	4	ISM	ENSMUSG00000044465.20	ENSMUST00000137158.8	3414	12	16186	-2320	321	2320	3prime_fragment	FALSE	canonical	3	167	junction_3	18.6607133363712	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTTCAAAGATCATGC	NA	False	NA	NA	False	NA	NA	NA	105033006	105025496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987
ES.31596.7	chr7	-	5125	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	47	5681	1	1718	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGACTTTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	105049214	105026098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31596.8	chr7	-	5213	13	NNC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	2	1715	intron_retention	FALSE	non_canonical	0	0	junction_9	120.229525861532	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGAGACTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	105049213	105026101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038459_105039100_105039227_105039560_105040783_105040875_105049090
ES.31596.9	chr7	-	5161	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	-4	-1714	2	1713	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAATGAGACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	105049213	105026103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ES.31597.1	chr7	+	2518	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	54	1	-32	-1	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAGGCTCAGATTATTC	NA	False	NA	NA	False	GATAAA	-14	NA	105074991	105085545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
ES.31597.2	chr7	+	1498	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	222	853	136	-853	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAAAATCCGGGATTAA	NA	False	NA	NA	False	TATAAA	-18	NA	105075159	105084693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
ES.31598.1	chr7	-	175	1	Intergenic	novelGene_25904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATATTTAATTATG	NA	False	NA	NA	False	NA	NA	NA	105118273	105118098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_105118100_105118300
ES.31599.1	chr7	-	1129	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	9	524	9	-524	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAGACTCAATGAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	105131498	105129813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105130427_105130982
ES.316.10	chr1	+	4373	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37481110	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488238_37489396_37489489_37491311_37491505_37491601_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.11	chr1	+	3722	7	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	4524	False	NA	NA	False	NA	NA	NA	37499124	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119
ES.316.12	chr1	+	3724	7	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4525	False	NA	NA	False	NA	NA	NA	37499125	37575316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.13	chr1	+	1779	8	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	4525	False	NA	NA	False	NA	NA	NA	37499125	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37500004_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.14	chr1	+	3904	1	Antisense	novelGene_ENSMUSG00000026110.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGACGACGACGACTA	4525	False	NA	NA	False	AAGAAA	-35	NA	37499125	37503029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37499100_37503000
ES.316.15	chr1	+	5201	6	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	4525	False	NA	NA	False	NA	NA	NA	37499125	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37503616_37505617_37505665_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.16	chr1	+	175	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTTTATAAAGAG	4631	False	NA	NA	False	NA	NA	NA	37499231	37499406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37499200_37499400
ES.316.17	chr1	+	738	6	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8955	False	NA	NA	False	NA	NA	NA	37503555	37575316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37503616_37505617_37505665_37529340_37529466_37534953_37535092_37537650_37537822_37575119
ES.316.19	chr1	+	3810	4	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37526170	37575316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.20	chr1	+	1826	1	Antisense	novelGene_ENSMUSG00000026110.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37573514	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37573500_37575300
ES.316.3	chr1	+	6291	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479185	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489489_37491311_37491505_37491601_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.316.5	chr1	+	6248	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479185	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489476_37491314_37491513_37491608_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37503501_37503615_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119
ES.316.6	chr1	+	6264	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479185	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489489_37491311_37491505_37491601_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119
ES.316.7	chr1	+	6294	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479186	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489489_37491311_37491505_37491601_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529470_37534944_37535092_37537650_37537822_37575119
ES.316.8	chr1	+	6289	15	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479192	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489491_37491312_37491505_37491601_37491715_37493826_37493956_37495669_37495786_37501972_37502043_37503496_37503611_37505608_37505665_37529340_37529475_37534953_37535096_37537655_37537824_37575120
ES.316.9	chr1	+	6123	13	Antisense	novelGene_ENSMUSG00000087233.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTGATGAATTGATGAT	NA	False	NA	NA	False	NA	NA	NA	37479192	37575340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_37483767_37483887_37484000_37488175_37488244_37489409_37489489_37491311_37491505_37491601_37491715_37493826_37493955_37495669_37495786_37501972_37502049_37529340_37529475_37534953_37535092_37537650_37537822_37575119
ES.3160.1	chr10	+	2042	14	NNC	ENSMUSG00000001155.14	novel	464	4	NA	NA	-4554	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1.43498139278289	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTCTGGTGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	76406927	76425393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76407151_76412334_76412519_76413835_76413965_76415616_76415706_76415823_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76422966_76423011_76423134_76423274_76423903_76424000_76425059
ES.3160.2	chr10	+	837	4	NNC	ENSMUSG00000001155.14	novel	2914	12	NA	NA	-4494	-10167	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAAACCCCATTACC	NA	False	NA	NA	False	NA	NA	NA	76406987	76414235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76407151_76411503_76411594_76412334_76412519_76413835
ES.31600.1	chr7	+	178	1	Intergenic	novelGene_25905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105167804	105167982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_105167800_105168000
ES.31601.1	chr7	+	2367	6	NNC	ENSMUSG00000037049.10	novel	2412	6	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.9115345252878	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCACCGTTCCTATTTCT	NA	False	NA	5	True	AATAAA	-15	NA	105203594	105207590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105204034_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
ES.31601.2	chr7	+	2382	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	28	2	28	-2	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGTTCCTATTTCTTCTT	NA	False	NA	9	True	AATAAA	-19	NA	105203594	105207594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
ES.31602.1	chr7	-	2651	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	248	-21	35	1	multi-exon	FALSE	canonical	3	117	junction_6	14.1718113410527	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTCCTGTGCTCATG	NA	False	NA	-21	True	AATAAA	-18	NA	105230450	105207688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.10	chr7	-	2636	14	NNC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	42.4075744043904	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTTCCTGTGCTC	NA	False	NA	-24	True	AATAAA	-15	NA	105230431	105207691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215747_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.11	chr7	-	2666	14	FSM	ENSMUSG00000037032.17	ENSMUST00000191011.7	2712	14	44	2	44	-1	multi-exon	FALSE	canonical	1	8	junction_13	40.0285401141316	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTTCCTGTGCTC	NA	False	NA	-24	True	AATAAA	-15	NA	105230816	105207691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230689
ES.31602.12	chr7	-	3666	11	NIC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	128	junction_3	10.9745159346552	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTTCCTGTGCTC	NA	False	NA	-24	True	AATAAA	-15	NA	105230435	105207691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214593_105214739_105215386_105215754_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.13	chr7	-	3032	13	NIC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	128	junction_3	10.9417650414466	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCTTCCTGTGCTC	NA	False	NA	-24	True	AATAAA	-15	NA	105230431	105207691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.14	chr7	-	3017	13	NNC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	-37	0	intron_retention	FALSE	non_canonical	0	0	junction_5	43.808532273976	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTCTTCCTGTGCT	NA	False	NA	-25	True	AATAAA	-14	NA	105230436	105207692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214740_105214855_105215257_105215386_105215754_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.15	chr7	-	3100	12	NIC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	128	junction_2	10.9552055629103	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTCTTCCTGTGCT	NA	False	NA	-25	True	AATAAA	-14	NA	105230419	105207692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.16	chr7	-	3747	9	NIC	ENSMUSG00000037032.17	novel	2878	14	NA	NA	25	0	intron_retention	FALSE	canonical	3	128	junction_1	11.409973707244	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTCTTCCTGTGC	NA	False	NA	-26	True	AATAAA	-13	NA	105230460	105207693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105216354_105216460_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.2	chr7	-	2611	14	NNC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	41.2438268646093	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230443	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215288_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.3	chr7	-	2708	14	NNC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	42.1177554654066	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230425	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215989_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.4	chr7	-	3372	12	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	10	0	intron_retention	FALSE	canonical	3	128	junction_3	11.2529151411336	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230385	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.5	chr7	-	2749	15	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	53.8097555831502	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230435	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105224636_105224752_105230341
ES.31602.6	chr7	-	3596	10	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	-22	0	intron_retention	FALSE	canonical	3	128	junction_2	10.7714758207975	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230421	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ES.31602.7	chr7	-	1905	13	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	43.639304404274	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230441	105207690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105230341
ES.31603.1	chr7	+	155	1	Intergenic	novelGene_25906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAGAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	105273997	105274152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_105274000_105274200
ES.31604.10	chr7	-	8011	10	NIC	ENSMUSG00000036989.17	novel	3016	12	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	8	junction_9	14.9625045767704	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTTTGCTAGGTTCTT	NA	False	NA	-4	True	AATAAA	-13	NA	105282783	105259858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
ES.31604.11	chr7	-	6883	11	NIC	ENSMUSG00000036989.17	novel	3016	12	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	8	junction_10	14.5808093053849	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTTTGCTAGGTTCTT	NA	False	NA	-4	True	AATAAA	-13	NA	105282792	105259858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
ES.31604.13	chr7	-	2901	12	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-14	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	14.9848408248288	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTTTTGCTAGGTTC	NA	False	NA	-6	True	AATAAA	-11	NA	105282792	105259860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268436_105268589_105268822_105274612_105274779_105282583
ES.31604.19	chr7	-	2837	12	NIC	ENSMUSG00000036989.17	novel	3016	12	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	18.6830899810409	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTGTTTTTGCTAGGT	NA	False	NA	-8	True	AATAAA	-9	NA	105282756	105259862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268436_105268589_105268822_105274612_105274779_105282609
ES.31604.21	chr7	-	2325	10	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-5	-168	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	15.5357016156773	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTCCTAGGCACTAT	NA	False	NA	NA	False	NA	NA	NA	105282783	105261682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268436_105268589_105268822_105274612_105274779_105282583
ES.31604.3	chr7	-	2879	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	-39	1	-5	-1	multi-exon	FALSE	canonical	3	39	junction_9	7.22140985754018	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTAGGTTCTTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	105282783	105259855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
ES.31604.4	chr7	-	2852	12	FSM	ENSMUSG00000036989.17	ENSMUST00000057525.14	3016	12	-16	180	-5	0	multi-exon	FALSE	canonical	3	8	junction_11	13.9497326613206	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282783	105259856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
ES.31604.6	chr7	-	2997	12	FSM	ENSMUSG00000036989.17	ENSMUST00000147044.4	2972	12	-25	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_11	16.03560088889	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282717	105259856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282398
ES.31604.7	chr7	-	4015	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	39	junction_8	7.22841614740048	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282783	105259856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
ES.31604.8	chr7	-	3941	9	NNC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_3	17.6546736021938	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282773	105259856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105260418_105260535_105261885_105262104_105262166_105266647_105266752_105266948_105267682_105267872_105268418_105268589_105268822_105274612_105274779_105282583
ES.31605.1	chr7	-	3380	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGTTTTTATTGTATT	NA	False	NA	NA	False	NA	NA	NA	105289565	105283413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.10	chr7	-	2009	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	8	-4	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCCCAGTGAGGT	NA	False	NA	NA	False	AATAAA	-9	NA	105289615	105284834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.11	chr7	-	1654	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	48.5615302705982	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCCCAGTGAGGT	NA	False	NA	NA	False	AATAAA	-9	NA	105289568	105284834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105289451
ES.31605.12	chr7	-	1724	8	FSM	ENSMUSG00000030881.16	ENSMUST00000084782.10	2254	8	21	509	-4	-4	multi-exon	FALSE	canonical	1	5	junction_7	43.718953999101	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCCCAGTGAGGT	NA	False	NA	NA	False	AATAAA	-9	NA	105289537	105284834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288633_105289451
ES.31605.14	chr7	-	1481	8	NNC	ENSMUSG00000030881.16	novel	1582	8	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	57.8580246846379	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCCCAGTGAGGT	NA	False	NA	NA	False	AATAAA	-9	NA	105289504	105284834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105285601_105286017_105286193_105286327_105286397_105287146_105287248_105287415_105287535_105288215_105288313_105288531_105288633_105289451
ES.31605.15	chr7	-	2478	3	NIC	ENSMUSG00000030881.16	novel	4448	5	NA	NA	-365	-6	intron_retention	FALSE	canonical	3	119	junction_2	9.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGCAGGCCCAGTGAG	NA	False	NA	NA	False	AATAAA	-7	NA	105287617	105284836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105286193_105286327_105287248_105287415
ES.31605.16	chr7	-	1820	9	NIC	ENSMUSG00000030881.16	novel	1141	8	NA	NA	-27	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	57.9202037289235	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTCATAAAAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	105289585	105284844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105286933_105287069_105287248_105287415_105287535_105288215_105288301_105288531_105288673_105289451
ES.31605.2	chr7	-	3182	5	NIC	ENSMUSG00000030881.16	novel	938	7	NA	NA	-327	-2	intron_retention	FALSE	canonical	1	2	junction_2	57.5906893516652	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTTTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	105288562	105283415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105286193_105286327_105286486_105287415_105287535_105288215_105288313_105288531
ES.31605.3	chr7	-	3199	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	70	6	5	-2	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTTTTTATTGTA	NA	False	NA	NA	False	NA	NA	NA	105289553	105283415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.4	chr7	-	3183	8	NNC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.8257569495584	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTACAGTTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	105289560	105283416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105285601_105286017_105286193_105286327_105286464_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.5	chr7	-	3604	7	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	112	junction_2	9.86013297183269	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTACAGTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	105289543	105283417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.6	chr7	-	1793	8	FSM	ENSMUSG00000030881.16	ENSMUST00000209550.2	1141	8	-47	-605	-12	1	multi-exon	FALSE	canonical	1	2	junction_6	44.7975035747597	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTGAGGTCAATTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	105289570	105284826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288301_105288531_105288673_105289451
ES.31605.8	chr7	-	1852	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	5	1418	5	0	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	105289618	105284827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31605.9	chr7	-	2263	6	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_1	51.4626077846819	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGGCCCAGTGAGGT	NA	False	NA	NA	False	AATAAA	-9	NA	105289528	105284834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105286486_105287069_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ES.31606.1	chr7	+	624	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	365	2284	-27	5	multi-exon	FALSE	canonical	3	351	junction_1	22.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTATGGGTACCAGC	NA	False	NA	12	True	AATAAA	-21	NA	105289627	105290560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968_105290065_105290234
ES.31606.10	chr7	+	3479	16	NNC	ENSMUSG00000110234.3	novel	3795	17	NA	NA	3	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	126.590608744181	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTTCTATGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	105289773	105333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105289830_105289968_105290065_105290234_105290436_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380_105306492_105317652_105317810_105322996_105323201_105323626_105323679_105327000_105327264_105327353_105327598_105331985_105332144_105332839_105332966_105333054
ES.31606.11	chr7	+	644	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	4	435	1	2	multi-exon	FALSE	canonical	3	351	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGTCTATGGGTACC	NA	False	NA	9	True	AATAAA	-18	NA	105289774	105290557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968
ES.31606.12	chr7	+	1133	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	4	-54	1	0	multi-exon	FALSE	canonical	3	351	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGAAGTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	105289774	105291046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968
ES.31606.13	chr7	+	806	2	NIC	ENSMUSG00000089847.9	novel	556	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	28	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGAAGTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	105289779	105291046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105290368_105290828
ES.31606.14	chr7	+	2913	2	FSM	ENSMUSG00000089847.9	ENSMUST00000151193.2	1083	2	18	-1848	-7	1	multi-exon	FALSE	canonical	3	351	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTGTTTCCTTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	105289788	105292840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968
ES.31606.15	chr7	+	4010	3	NIC	ENSMUSG00000110234.3	novel	1972	9	NA	NA	10460	8	intron_retention	FALSE	canonical	2	4	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGGTCATGGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	105300849	105308257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105301514_105304828_105306298_105306380
ES.31606.2	chr7	+	2104	9	NNC	ENSMUSG00000110234.3	novel	1972	9	NA	NA	-111	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	160.538498108709	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGGTCATGGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	105289647	105308257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105289830_105289968_105290065_105290234_105290436_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380_105306492_105308114
ES.31606.3	chr7	+	2879	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	393	1	1	-1	multi-exon	FALSE	canonical	3	351	junction_1	22.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTTCCTTTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	105289655	105292843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968_105290065_105290234
ES.31606.4	chr7	+	684	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	6	4	6	0	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGAAGTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	105289660	105291046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ES.31606.5	chr7	+	656	2	NNC	ENSMUSG00000089847.9	novel	556	4	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGAAGTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	105289668	105291046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105289797_105290518
ES.31606.6	chr7	+	494	3	NIC	ENSMUSG00000089847.9	novel	529	4	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	12.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGAAGTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-7	NA	105289686	105291046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105289830_105290234_105290368_105290828
ES.31606.7	chr7	+	3613	8	ISM	ENSMUSG00000110234.3	ENSMUST00000142363.8	1972	9	-9	-6	1	6	intron_retention	FALSE	canonical	1	3	junction_3	167.447097951099	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	105289759	105308255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_105289830_105289968_105290065_105290234_105290436_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380
ES.31606.8	chr7	+	3601	17	NIC	ENSMUSG00000110234.3	novel	3795	17	NA	NA	3	-163	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	123.225514175231	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTAGCCTCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	105289761	105333483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105289830_105289968_105290065_105290234_105290368_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380_105306492_105317652_105317810_105322996_105323252_105323357_105323496_105323626_105323679_105327000_105327264_105327353_105327598_105331985_105332144_105332839_105332966_105333054
ES.31606.9	chr7	+	1913	9	NNC	ENSMUSG00000110234.3	novel	1972	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	160.611332103311	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTCACTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	105289764	105308251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105289830_105289968_105290065_105290234_105290368_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380_105306492_105308114
ES.31607.1	chr7	-	2446	1	Intergenic	novelGene_25907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGTTCTCCAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	105299830	105297384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_105297400_105299800
ES.31608.1	chr7	+	3532	7	NNC	ENSMUSG00000030882.20	novel	14536	44	NA	NA	34721	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAATGACTTCTGGCATT	NA	False	NA	NA	False	AATAAA	-14	NA	105361951	105371004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105361994_105362190_105363788_105364383_105364498_105364584_105364784_105369078_105369171_105369318_105369469_105369666
ES.31609.1	chr7	-	2117	1	Antisense	novelGene_ENSMUSG00000030882.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTGAATCCAAGAACACA	4162	False	NA	NA	False	NA	NA	NA	105370238	105368121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_105368100_105370200
ES.3161.1	chr10	-	5054	26	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	8697	-1660	8392	1660	3prime_fragment	FALSE	canonical	0	0	junction_1	0.848528137423857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGGCTGTCATCAC	NA	False	NA	NA	False	AATATA	-29	NA	76450767	76429935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76446996_76447024_76447249_76447277_76447625_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170
ES.3161.2	chr10	-	3753	28	FSM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	197	-1	-108	1	multi-exon	FALSE	canonical	0	0	junction_1	0.818174890162019	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCTGCCAGGTCCCCA	9572	False	NA	NA	False	AATAAA	-15	NA	76459267	76431594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76446996_76447024_76447249_76447277_76447625_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170_76450770_76450879_76451053_76459084
ES.3161.3	chr10	-	4182	27	FSM	ENSMUSG00000020241.14	ENSMUST00000137365.2	4912	27	-14	744	-14	-744	multi-exon	FALSE	canonical	0	0	junction_3	0.817703524056512	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGAGTAAGCCCTGT	9666	False	NA	NA	False	NA	NA	NA	76459173	76437588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76446996_76447024_76447249_76447277_76447625_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170_76450770_76450879_76451053_76459084
ES.31610.1	chr7	+	1802	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	-9	2	-9	1	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCGTGTGGGGACAGAG	NA	False	NA	26	True	AATAAA	-16	NA	105385789	105392130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.10	chr7	+	1758	13	FSM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	-13	4	-13	0	multi-exon	FALSE	canonical	0	0	junction_1	93.7171794401764	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGCTCGTGTGGGGA	NA	False	NA	21	True	AATAAA	-11	NA	105385918	105392125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.11	chr7	+	1664	12	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	375	4	-1	0	3prime_fragment	FALSE	canonical	3	270	junction_7	30.9136360294609	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGCTCGTGTGGGGA	NA	False	NA	21	True	AATAAA	-11	NA	105386306	105392125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.2	chr7	+	1666	12	NIC	ENSMUSG00000030890.17	novel	1795	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	95.0764807409416	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGCTCGTGTGGGGA	NA	False	NA	21	True	AATAAA	-11	NA	105385789	105392125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391719
ES.31610.3	chr7	+	1980	11	NIC	ENSMUSG00000030890.17	novel	1795	13	NA	NA	-35	0	intron_retention	FALSE	canonical	3	265	junction_1	32.6877652952905	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGCTCGTGTGGGGA	NA	False	NA	21	True	AATAAA	-11	NA	105385842	105392125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.4	chr7	+	1760	11	NIC	ENSMUSG00000030890.17	novel	1795	13	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	2	junction_3	100.946322369861	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACAGGCTCGTGTGGGG	NA	False	NA	20	True	AATAAA	-10	NA	105385869	105392124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105385924_105386307_105386445_105389383_105389550_105389977_105390075_105390166_105390251_105390354_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.8	chr7	+	1689	13	NNC	ENSMUSG00000030890.17	novel	1795	13	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.258242630853	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACAGGCTCGTGTGGG	NA	False	NA	19	True	AATAAA	-9	NA	105385888	105392123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_105385924_105386307_105386437_105389382_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ES.31610.9	chr7	+	5284	6	NIC	ENSMUSG00000030890.17	novel	2278	8	NA	NA	25	0	intron_retention	FALSE	canonical	3	265	junction_1	34.5867026471157	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCGTGTGGGGACAGA	NA	False	NA	25	True	AATAAA	-15	NA	105385902	105392129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_105385924_105386307_105389550_105389719_105390251_105390354_105391304_105391413_105391545_105391719
ES.31611.1	chr7	-	3703	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	253	-903	-155	903	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCATTTTCTGGTTCT	9832	False	NA	NA	False	NA	NA	NA	105385735	105380033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ES.31611.2	chr7	-	2521	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	67	465	67	209	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCACTGTGTCTGATCAC	9870	False	NA	2	True	AATAAA	-26	NA	105385921	105381401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ES.31611.3	chr7	-	4239	5	NIC	ENSMUSG00000030888.15	novel	3053	7	NA	NA	284	197	intron_retention	FALSE	canonical	3	267	junction_2	7.51664818918645	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCGTTGATCTCACT	9928	False	NA	-10	True	AATAAA	-14	NA	105386308	105381413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383661_105383896
ES.31611.4	chr7	-	2417	7	FSM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	-5	-196	-5	196	multi-exon	FALSE	canonical	0	0	junction_6	101.739318303638	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCGTTGATCTCAC	9639	False	NA	-11	True	AATAAA	-13	NA	105386597	105381414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105386271
ES.31611.5	chr7	-	2311	6	NIC	ENSMUSG00000030888.15	novel	3053	7	NA	NA	-91	196	intron_retention	FALSE	canonical	1	5	junction_5	107.611523546505	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCGTTGATCTCAC	9896	False	NA	-11	True	AATAAA	-13	NA	105385671	105381414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105382351_105382558_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385534
ES.31611.6	chr7	-	2373	6	NIC	ENSMUSG00000030888.15	novel	3053	7	NA	NA	-104	196	intron_retention	FALSE	canonical	3	267	junction_2	16.9870538940689	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCGTTGATCTCAC	9883	False	NA	-11	True	AATAAA	-13	NA	105385684	105381414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383661_105383896_105384264_105385504
ES.31611.7	chr7	-	2119	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	253	681	-155	-7	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTCAGCCTCCTGA	9832	False	NA	NA	False	NA	NA	NA	105385735	105381617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ES.31611.8	chr7	-	1767	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	273	1013	-135	-103	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGGATCTCTGGGTT	9852	False	NA	NA	False	NA	NA	NA	105385715	105381949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ES.31612.1	chr7	-	5189	4	FSM	ENSMUSG00000043866.12	ENSMUST00000131683.8	601	4	-267	-4321	-7	818	multi-exon	FALSE	canonical	3	1257	junction_1	50.2084543567006	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTCTTATAGTCAGATA	6451	False	NA	NA	False	NA	NA	NA	105393556	105387781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036
ES.31612.2	chr7	-	4273	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	19	-11	0	11	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGACATATATTTTATAA	6458	False	NA	-1	True	AATAAA	-31	NA	105393549	105388588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
ES.31612.3	chr7	-	4919	1	Genic_Genomic	ENSMUSG00000043866.12	novel	NA	NA	NA	NA	36	5	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCCTAAGGACATATATT	6494	False	NA	-7	True	AATAAA	-25	NA	105393513	105388594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_105388600_105393500
ES.31612.4	chr7	-	4206	5	NNC	ENSMUSG00000043866.12	novel	4281	5	NA	NA	35	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	632.453703839261	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATTTTCATCCCCT	6493	False	NA	-20	True	AATAAA	-12	NA	105393514	105388607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105392271_105392438_105392548_105392634_105392693_105393036_105393192_105393293
ES.31612.5	chr7	-	877	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	-8	3412	-8	91	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGCAGGGAACAAGTCCC	6431	False	NA	61	True	GGGGCT	-15	NA	105393576	105392011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
ES.31612.6	chr7	-	610	4	NIC	ENSMUSG00000043866.12	novel	4281	5	NA	NA	36	2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	566.488795613431	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6494	False	NA	-28	True	AATAAA	-17	NA	105393513	105392100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105392271_105392634_105392700_105393036_105393192_105393293
ES.31612.8	chr7	-	766	5	NNC	ENSMUSG00000043866.12	novel	4281	5	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	563.87382232198	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGATCCCTCCCATGT	6465	False	NA	-28	True	AATAAA	-17	NA	105393542	105392100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393204_105393293
ES.31613.1	chr7	-	3384	12	NNC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	119.507183642444	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401412	105394017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399191_105399386_105399538_105401188_105401261_105401377
ES.31613.10	chr7	-	5211	6	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	571	9	428	-9	intron_retention	FALSE	canonical	3	326	junction_5	9.60416576283437	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105400871	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089
ES.31613.11	chr7	-	3553	13	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	93.8832016686455	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401424	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401166_105401261_105401377
ES.31613.12	chr7	-	3685	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	275	junction_11	26.0219233698773	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401431	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.13	chr7	-	3534	13	NNC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	120.466454528498	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTCTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	105401419	105394027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399191_105399386_105399538_105400796_105400937_105401188_105401261_105401364
ES.31613.14	chr7	-	3313	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	30	215	-7	-215	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTGGAATTAAGCAATG	NA	False	NA	NA	False	AATAAA	-16	NA	105401412	105394232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.15	chr7	-	3666	12	NNC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	13	junction_9	92.3617573180374	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401406	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399191_105399386_105400937_105401188_105401261_105401377
ES.31613.16	chr7	-	5330	6	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	275	junction_5	27.3744406335545	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401407	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105397859_105398089_105401261_105401377
ES.31613.17	chr7	-	4286	9	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	275	junction_8	24.3977457975117	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401431	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105401261_105401377
ES.31613.18	chr7	-	2438	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	9	1111	9	-3	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401433	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.19	chr7	-	2598	10	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	9	-3	intron_retention	FALSE	canonical	3	32	junction_8	97.5955372385894	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401433	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
ES.31613.2	chr7	-	3543	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	15	0	-3	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401427	105394017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.20	chr7	-	4109	6	ISM	ENSMUSG00000030894.6	ENSMUST00000210840.2	3687	12	549	3	428	-3	intron_retention	FALSE	canonical	3	326	junction_5	9.60416576283437	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105400871	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089
ES.31613.21	chr7	-	4109	9	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	275	junction_8	28.4382554844702	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGAGTGATTTTT	NA	False	NA	1	True	AATAAA	-27	NA	105401432	105395128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105399195_105399386_105400937_105401188_105401261_105401377
ES.31613.22	chr7	-	2625	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	275	junction_11	23.5849090285355	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401431	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.24	chr7	-	2590	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	7	-6	intron_retention	FALSE	canonical	3	275	junction_11	26.077126546566	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401435	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.25	chr7	-	2222	11	NNC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	131.45508738729	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401436	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399191_105399386_105399538_105401377
ES.31613.26	chr7	-	4093	10	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	9	-6	intron_retention	FALSE	canonical	3	275	junction_9	25.9905015888402	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401433	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105401261_105401377
ES.31613.27	chr7	-	2568	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	1	-6	intron_retention	FALSE	canonical	3	275	junction_11	26.0219233698773	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401419	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.28	chr7	-	2637	10	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	6	-6	intron_retention	FALSE	canonical	3	32	junction_8	95.0630719802437	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401436	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399538_105401188_105401261_105401377
ES.31613.29	chr7	-	4165	9	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	275	junction_8	26.0240273593462	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401412	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398631_105398743_105400937_105401188_105401261_105401377
ES.31613.3	chr7	-	3874	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	275	junction_10	23.9668521086938	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401419	105394017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.30	chr7	-	3823	11	NNC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	13	junction_8	95.7037616815556	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401419	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399191_105399386_105400937_105401188_105401261_105401377
ES.31613.31	chr7	-	3709	8	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	520	-6	intron_retention	FALSE	canonical	3	309	junction_6	16.9489027999587	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105400779	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398631_105398743_105399195_105399386
ES.31613.32	chr7	-	2343	10	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	1	junction_9	106.891429861228	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401406	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105401377
ES.31613.33	chr7	-	2575	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	-6	intron_retention	FALSE	canonical	3	275	junction_11	24.9339623673985	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401403	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.34	chr7	-	807	3	NNC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.5	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401419	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395857_105401220_105401261_105401377
ES.31613.35	chr7	-	2293	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	89.1434909764649	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCTTGAGTGATT	NA	False	NA	-2	True	AATAAA	-24	NA	105401431	105395131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105401188_105401261_105401377
ES.31613.40	chr7	-	3914	11	NNC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-2	-7	intron_retention	FALSE	canonical	1	5	junction_1	98.0318825688867	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTGCTTGAGTGAT	NA	False	NA	-3	True	AATAAA	-23	NA	105401407	105395132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395561_105395652_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105400937_105401188_105401261_105401377
ES.31613.41	chr7	-	2437	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	32	junction_9	92.6736208421792	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTTTTGCTTGAGTG	NA	False	NA	-5	True	AATAAA	-21	NA	105401431	105395134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
ES.31613.42	chr7	-	2466	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	-18	intron_retention	FALSE	canonical	3	32	junction_9	91.3324148372307	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGCTTTAAATTTTT	NA	False	NA	-14	True	AATAAA	-12	NA	105401424	105395143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399538_105401188_105401261_105401377
ES.31613.43	chr7	-	3960	4	ISM	ENSMUSG00000030894.6	ENSMUST00000210840.2	3687	12	1716	18	-1365	-18	intron_retention	FALSE	canonical	3	339	junction_3	6.84754619472471	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGCTTTAAATTTTT	303	False	NA	-14	True	AATAAA	-12	NA	105399704	105395143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865
ES.31613.44	chr7	-	3885	10	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	0	-141	intron_retention	FALSE	canonical	3	275	junction_9	24.800438068612	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATTGGCTGCAATCTA	NA	False	NA	NA	False	NA	NA	NA	105401420	105395266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105400937_105401188_105401261_105401377
ES.31613.45	chr7	-	2186	14	NNC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-142	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	88.9289990042918	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATTGGCTGCAATCT	NA	False	NA	NA	False	NA	NA	NA	105401412	105395267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_105395561_105395652_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.46	chr7	-	2290	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	18	1250	0	-142	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATTGGCTGCAATCT	NA	False	NA	NA	False	NA	NA	NA	105401424	105395267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.48	chr7	-	2401	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-1	-160	intron_retention	FALSE	canonical	3	275	junction_11	26.0219233698773	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	105401406	105395285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ES.31613.49	chr7	-	4030	1	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	6	1078	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACAGTTGAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	105401414	105397384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105397400_105401400
ES.31613.5	chr7	-	3698	10	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	32	junction_8	97.5955372385894	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401431	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
ES.31613.6	chr7	-	4925	11	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	275	junction_10	26.6578318698277	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401412	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105400937_105401188_105401261_105401377
ES.31613.8	chr7	-	3538	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	-9	intron_retention	FALSE	canonical	3	32	junction_9	92.6736208421792	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401424	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
ES.31613.9	chr7	-	3112	10	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	0	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	104.84909791378	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCTGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	105401424	105394026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105401188_105401261_105401377
ES.31614.1	chr7	-	144	1	Intergenic	novelGene_25908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGGGGAAGAGGT	NA	False	NA	-1	True	NA	NA	NA	105451726	105451582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_105451600_105451700
ES.31615.1	chr7	-	7193	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	95	12	-5	-12	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATACAAAGCTACTTC	NA	False	NA	NA	False	ATTAAA	-27	NA	105460211	105452424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.2	chr7	-	6650	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	86	564	-14	-564	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTGTCTATTGAATCAA	NA	False	NA	NA	False	AATAAA	-22	NA	105460220	105452976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.3	chr7	-	3961	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	44	3295	-27	3156	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTGGCGGTCAATATG	NA	False	NA	NA	False	GATAAA	-24	NA	105460262	105455707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.4	chr7	-	3755	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	91	3454	-9	2997	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGCCATTTGAGACTGT	NA	False	NA	NA	False	AATGAA	-17	NA	105460215	105455866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.5	chr7	-	1149	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	41	6110	-30	341	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTCAGTTTGCTTAT	NA	False	NA	0	True	NA	NA	NA	105460265	105458522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.6	chr7	-	933	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	-4	6371	-4	80	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTAGTTTTGCTTGTTT	NA	False	NA	-1	True	AGTAAA	-25	NA	105460310	105458783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31615.7	chr7	-	977	3	FSM	ENSMUSG00000030879.11	ENSMUST00000176887.2	380	3	-61	-536	10	72	multi-exon	FALSE	canonical	0	0	junction_1	1127.5	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTCTAGGTCTAGTTTT	NA	False	NA	-9	True	AGTAAA	-17	NA	105460296	105458791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459590_105459726_105460014
ES.31615.8	chr7	-	864	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	-39	6475	-39	-1	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTGACTTTCTTGTCC	NA	False	NA	-29	True	GATAAA	-19	NA	105460345	105458887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_105459352_105459656_105459726_105460014
ES.31616.1	chr7	+	115	1	Intergenic	novelGene_25909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	105805675	105805790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_105805700_105805800
ES.31617.1	chr7	+	3342	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-61	-9	-61	0	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTCATGTTTTTTAT	NA	False	NA	NA	False	AGTAAA	-20	NA	106766135	106797309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
ES.31617.2	chr7	+	3800	10	ISM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	-61	-8	-61	-1	intron_retention	FALSE	canonical	2	8	junction_7	2.19988776369148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	106766135	106797308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353
ES.31617.3	chr7	+	1742	10	NIC	ENSMUSG00000016626.11	novel	3272	11	NA	NA	-44	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.89998417217428	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	106766152	106797308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_106766289_106780365_106780453_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
ES.31617.4	chr7	+	3717	10	NIC	ENSMUSG00000016626.11	novel	3272	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	2	8	junction_6	2.3094010767585	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGTCATGTTTTTTA	NA	False	NA	NA	False	AGTAAA	-19	NA	106766184	106797308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_106766289_106780365_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
ES.31617.5	chr7	+	1960	9	NNC	ENSMUSG00000016626.11	novel	3272	11	NA	NA	-4311	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.49776714490831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTCATGTTTTTTAT	NA	False	NA	NA	False	AGTAAA	-20	NA	106782023	106797309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795424_106796353_106796525_106796983
ES.31618.1	chr7	+	1763	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	-284	-7	-284	7	mono-exon	FALSE	NA	NA	NA	NA	NA	593	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTAGTAGTCTTCCTTCT	NA	False	NA	27	True	NA	NA	NA	106808367	106810130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106808400_106810100
ES.31618.10	chr7	+	4020	9	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2536	3	NA	NA	2	1	multi-exon	FALSE	canonical	0	0	junction_1	69.5539359058853	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	106808653	107147861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106808943_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.11	chr7	+	7700	10	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2536	3	NA	NA	2	-4	multi-exon	FALSE	canonical	0	0	junction_1	75.359877329459	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106808653	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106992844_106992942_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.12	chr7	+	7065	9	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2536	3	NA	NA	2	-542	multi-exon	FALSE	canonical	0	0	junction_1	69.5539359058853	896	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACACCTTCCTTGCC	NA	False	NA	NA	False	AATAAA	-6	NA	106808653	107147318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.13	chr7	+	1320	2	Genic_Genomic	ENSMUSG00000073894.2	novel	1472	1	NA	NA	11	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACCTGCTGCGTAGTAG	NA	False	NA	17	True	NA	NA	NA	106808662	106810120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_106809343_106809480
ES.31618.14	chr7	+	4422	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	13	-7611	multi-exon	FALSE	canonical	0	0	junction_1	18.0554700852678	641	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAGTGTGTATAGAAG	NA	False	NA	NA	False	NA	NA	NA	106808664	106891992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106891710
ES.31618.15	chr7	+	1128	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	32	-7298	multi-exon	FALSE	canonical	0	0	junction_1	18.0554700852678	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	106808683	106892305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106808943_106883988_106884145_106884819_106884938_106891710
ES.31618.16	chr7	+	7245	9	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2536	3	NA	NA	367	0	multi-exon	FALSE	canonical	0	0	junction_1	69.5539359058853	897	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106809018	107147863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.17	chr7	+	4123	6	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	462	120	multi-exon	FALSE	canonical	0	0	junction_1	16.5166582576501	644	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATTGTGCTTAAAATAA	NA	False	NA	NA	False	TATAAA	-15	NA	106809113	106899723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106896855_106896953_106898156_106898281_106899512
ES.31618.18	chr7	+	5597	5	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	864	-190	intron_retention	FALSE	canonical	0	0	junction_1	17.795715776557	643	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTGTCTGCTGT	NA	False	NA	NA	False	AATACA	-35	NA	106809515	106899413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106896758_106896953_106897299
ES.31618.19	chr7	+	5968	8	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2497	3	NA	NA	1280	-4	multi-exon	FALSE	canonical	0	0	junction_1	74.7854072854935	896	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106809931	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
ES.31618.2	chr7	+	2805	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	-45	-1288	-45	1288	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTACAACTCAAGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	106808606	106811411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106808600_106811400
ES.31618.20	chr7	+	3932	9	Fusion	ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2497	3	NA	NA	-29904	1	multi-exon	FALSE	canonical	0	0	junction_1	71.0897320293163	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	106812324	107147861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
ES.31618.21	chr7	+	4703	1	Intergenic	novelGene_25910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTGGTCCTATTTATA	2344	False	NA	NA	False	NA	NA	NA	106816491	106821194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106816500_106821200
ES.31618.22	chr7	+	2206	1	Genic_Genomic	ENSMUSG00000057215.7	novel	NA	NA	NA	NA	-2068	-57237	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	106840160	106842366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_106840200_106842400
ES.31618.23	chr7	+	985	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	-13	-4403	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGTGTGTTTGTCCC	NA	False	NA	11	True	AATAAA	-18	NA	106842215	106895200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
ES.31618.24	chr7	+	3853	9	Fusion	ENSMUSG00000062542.12_ENSMUSG00000057215.7	novel	1294	6	NA	NA	-13	0	multi-exon	FALSE	canonical	3	15	junction_3	64.1374256967022	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106842215	107147863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106842336_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.25	chr7	+	3573	7	Fusion	ENSMUSG00000057215.7_ENSMUSG00000062542.12	novel	2536	3	NA	NA	-9	1	multi-exon	FALSE	canonical	0	0	junction_1	60.4218963253849	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	106842219	107147861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106842336_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.27	chr7	+	4855	1	Intergenic	novelGene_25914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAACCTAAGATGCAAACG	NA	False	NA	NA	False	NA	NA	NA	106845272	106850127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106845300_106850100
ES.31618.28	chr7	+	6889	1	Intergenic	novelGene_25915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGGCCAGCTTCACAGA	NA	False	NA	NA	False	NA	NA	NA	106885452	106892341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106885500_106892300
ES.31618.29	chr7	+	4794	1	Intergenic	novelGene_25916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTGTTTGTCCCACA	NA	False	NA	14	True	AATAAA	-21	NA	106890409	106895203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106890400_106895200
ES.31618.3	chr7	+	1157	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	-1	-4403	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGTGTGTTTGTCCC	NA	False	NA	11	True	AATAAA	-18	NA	106808650	106895200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106808943_106883988_106884145_106884819_106884938_106894609
ES.31618.30	chr7	+	5876	1	Genic_Genomic	ENSMUSG00000057215.7	novel	NA	NA	NA	NA	52835	1336	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGTAGTCAGTATAAAG	NA	False	NA	NA	False	AATAAA	-1	NA	106895063	106900939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_106895100_106900900
ES.31618.31	chr7	+	6813	1	Intergenic	novelGene_25917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTCAAGTGCGGCTGG	NA	False	NA	NA	False	NA	NA	NA	106900466	106907279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106900500_106907300
ES.31618.32	chr7	+	1115	1	Intergenic	novelGene_25918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCAACCTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	106907647	106908762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106907600_106908800
ES.31618.33	chr7	+	2276	1	Intergenic	novelGene_25920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCTTTTAGTCATGGC	NA	False	NA	NA	False	NA	NA	NA	106937919	106940195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106937900_106940200
ES.31618.34	chr7	+	3691	1	Intergenic	novelGene_25921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAACTAATATAACTACT	NA	False	NA	NA	False	NA	NA	NA	106938759	106942450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106938800_106942400
ES.31618.35	chr7	+	6484	1	Intergenic	novelGene_25922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	106939450	106945934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106939400_106945900
ES.31618.36	chr7	+	1966	1	Intergenic	novelGene_25923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGCTCTTCTGCTTA	NA	False	NA	NA	False	NA	NA	NA	106948437	106950403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106948400_106950400
ES.31618.37	chr7	+	4119	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-302	0	-240	0	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106969694	107147863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.39	chr7	+	3489	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	-207	535	-145	-532	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGCCCATCCCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	106969789	107147328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.4	chr7	+	4744	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	0	-4403	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGTGTGTTTGTCCC	NA	False	NA	11	True	AATAAA	-18	NA	106808651	106895200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106894609
ES.31618.40	chr7	+	3651	6	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-124	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	62.0064512772663	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106969810	107147863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.41	chr7	+	3778	6	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-36	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	65.5389960252673	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106969898	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107145726
ES.31618.43	chr7	+	3755	6	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	63.3794919512613	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106969918	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107024253_107024606_107035481_107036029_107103380_107103541_107105695_107105826_107145726
ES.31618.44	chr7	+	3834	8	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	57.1074890546104	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106969926	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726_107147546_107147591
ES.31618.47	chr7	+	3924	8	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.3599280242419	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106969986	107147863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_106992844_106992942_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.48	chr7	+	3802	7	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.0410762458937	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106969986	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107024253_107024606_107035481_107036016_107101299_107101421_107103368_107103541_107105700_107105826_107145726
ES.31618.5	chr7	+	4646	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	1	-2351	multi-exon	FALSE	canonical	0	0	junction_1	19.131126469709	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGAATAGCTAGAATAT	NA	False	NA	NA	False	NA	NA	NA	106808652	106897252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106896758
ES.31618.50	chr7	+	3730	8	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.5443778286558	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	106969997	107147861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970198_106970268_106970355_107024253_107024606_107035481_107036016_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.51	chr7	+	3408	7	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	75.238325044857	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCGTTGTCTCATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	106970005	107147861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726_107147546_107147591
ES.31618.52	chr7	+	3945	8	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.1333240463415	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106970009	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101475_107103368_107103541_107105695_107105826_107117907_107118002_107145726
ES.31618.54	chr7	+	3885	8	NNC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	72.6565867064834	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACAGTCGTTGTCTC	NA	False	NA	NA	False	AGTAAA	-12	NA	106970037	107147856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_106970355_107024253_107024606_107035481_107036029_107039120_107039237_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ES.31618.55	chr7	+	3217	5	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	115	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	81.8825378209542	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTCGTTGTCTCATTA	NA	False	NA	NA	False	AGTAAA	-16	NA	106970111	107147860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107145726
ES.31618.57	chr7	+	1083	1	Intergenic	novelGene_25925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106985590	106986673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_106985600_106986700
ES.31618.58	chr7	+	2433	3	FSM	ENSMUSG00000062542.12	ENSMUST00000144003.8	2536	3	97	6	63	-6	multi-exon	FALSE	canonical	3	155	junction_2	4.5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATACAGTCGTTGTC	NA	False	NA	NA	False	AGTAAA	-10	NA	107103365	107147854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_107103541_107105695_107105826_107145726
ES.31618.6	chr7	+	2657	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	1	-1186	1	1186	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAACTAAACAAAT	NA	False	NA	NA	False	ATTAAA	-5	NA	106808652	106811309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_106808700_106811300
ES.31618.7	chr7	+	4875	5	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	2	-4403	multi-exon	FALSE	canonical	0	0	junction_1	16.224980739588	644	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATTGTGTGTTTGTCCC	NA	False	NA	11	True	AATAAA	-18	NA	106808653	106895200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106891710_106891844_106894609
ES.31618.8	chr7	+	4746	4	Fusion	ENSMUSG00000073894.2_ENSMUSG00000057215.7	novel	1294	6	NA	NA	2	-7298	multi-exon	FALSE	canonical	0	0	junction_1	18.0554700852678	642	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	106808653	106892305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_106812531_106883988_106884145_106884819_106884938_106891710
ES.31618.9	chr7	+	1240	2	Genic_Genomic	ENSMUSG00000073894.2	novel	1472	1	NA	NA	2	7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTAGTAGTCTTCCTTCT	NA	False	NA	27	True	NA	NA	NA	106808653	106810130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_106809436_106809672
ES.31619.1	chr7	-	6528	1	FSM	ENSMUSG00000086261.2	ENSMUST00000130985.2	1447	1	-1761	-3320	-1761	3320	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAAAACGTTTCCAAGG	NA	False	NA	NA	False	NA	NA	NA	106801157	106794629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_106794600_106801200
ES.31619.2	chr7	-	805	2	Antisense	novelGene_ENSMUSG00000073894.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGCTTTGCTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	106838162	106797306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_106797859_106837909
ES.31619.3	chr7	-	2250	1	Antisense	novelGene_ENSMUSG00000073894.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTGGTTATTGTG	4893	False	NA	NA	False	NA	NA	NA	106809193	106806943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_106806900_106809200
ES.31619.4	chr7	-	1508	2	Intergenic	novelGene_25911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGATATGGGGTGATTC	NA	False	NA	NA	False	AATAAA	-19	NA	106838164	106829002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_106830256_106837909
ES.31619.5	chr7	-	694	2	Intergenic	novelGene_25912	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTGTTATCATCCTGT	NA	False	NA	NA	False	TTTAAA	-18	NA	106838164	106836768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_106837208_106837909
ES.31619.6	chr7	-	420	2	Intergenic	novelGene_25913	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGTTACAATTACTT	NA	False	NA	NA	False	AATAAA	-21	NA	106838164	106837042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_106837208_106837909
ES.3162.1	chr10	-	4078	32	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.0574116415631	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8454	False	NA	0	True	AATAAA	-15	NA	76561990	76544625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ES.3162.10	chr10	-	3664	31	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	2454	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.6106801047659	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTGCCTCTTTATCTA	NA	False	NA	-2	True	AATAAA	-13	NA	76559548	76544627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76559493
ES.3162.11	chr10	-	3565	32	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	133	-392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.0574116415631	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCAGCTTGCTGGATT	8575	False	NA	NA	False	NA	NA	NA	76561869	76545017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ES.3162.2	chr10	-	4423	32	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	135	0	intron_retention	FALSE	canonical	0	0	junction_6	14.0574116415631	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8577	False	NA	0	True	AATAAA	-15	NA	76561867	76544625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548708_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ES.3162.3	chr10	-	3504	30	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	2690	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.959148204556	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	NA	False	NA	-1	True	AATAAA	-14	NA	76559312	76544626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554214_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209
ES.3162.6	chr10	-	3939	33	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	158	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	14.0270038118445	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCTCTTTATCTAC	8600	False	NA	-1	True	AATAAA	-14	NA	76561844	76544626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556864_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ES.3162.9	chr10	-	4120	31	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	132	-2	intron_retention	FALSE	canonical	0	0	junction_5	14.1226374622055	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTGCCTCTTTATCTA	8574	False	NA	-2	True	AATAAA	-13	NA	76561870	76544627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556877_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ES.31620.1	chr7	-	2550	1	Antisense	novelGene_ENSMUSG00000057215.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGCTACTTTTGGTC	NA	False	NA	NA	False	NA	NA	NA	106899277	106896727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_106896700_106899300
ES.31620.2	chr7	-	3441	1	Antisense	novelGene_ENSMUSG00000057215.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGAAGATGAGGCTGTA	NA	False	NA	NA	False	TATAAA	-17	NA	106902351	106898910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_106898900_106902400
ES.31621.1	chr7	-	1883	1	Intergenic	novelGene_25919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCTAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106918225	106916342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_106916300_106918200
ES.31622.1	chr7	-	2548	1	Intergenic	novelGene_25924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTAAGTGCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	106958676	106956128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_106956100_106958700
ES.31623.1	chr7	-	209	1	Intergenic	novelGene_25926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCCAGGTAG	NA	False	NA	NA	False	NA	NA	NA	107022054	107021845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_107021800_107022100
ES.31624.1	chr7	+	2879	3	Intergenic	novelGene_25927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATACCTGTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	107152790	107159251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_107153079_107154381_107154721_107156999
ES.31624.10	chr7	+	2846	4	FSM	ENSMUSG00000051041.9	ENSMUST00000239087.2	699	4	-148	-1999	-148	1447	multi-exon	FALSE	canonical	2	7	junction_1	2.35702260395516	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCTCATCAGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	107166824	107191748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_107167102_107170243_107170533_107189354_107189550_107189663
ES.31624.11	chr7	+	158	1	Intergenic	novelGene_25929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAAATTTTTA	4111	False	NA	NA	False	NA	NA	NA	107171100	107171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_107171100_107171300
ES.31624.12	chr7	+	3573	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-225	12	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTAATTTTGTTGGGG	7020	False	NA	NA	False	AATAAA	-28	NA	107194188	107344104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.13	chr7	+	3500	23	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-207	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	11.88555968079	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTGTGAAACATTTTT	7038	False	NA	NA	False	AATAAA	-15	NA	107194206	107344091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.14	chr7	+	3431	25	NNC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-65	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	15.8389792565332	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTGAAACATTTTTAAT	7180	False	NA	NA	False	AATAAA	-18	NA	107194348	107344094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107327922_107327956_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343388
ES.31624.15	chr7	+	3664	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-8	4	intron_retention	FALSE	canonical	2	2	junction_15	13.839479431188	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAAACATTTTTAATTT	7237	False	NA	NA	False	AATAAA	-20	NA	107194405	107344096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107327922_107327956_107328345_107328473_107329027_107329157_107337047_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.16	chr7	+	3239	26	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-6	23	combination_of_known_junctions	FALSE	canonical	1	1	junction_24	13.6436945143169	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTGTTAGTTCATGAAA	7239	False	NA	NA	False	NA	NA	NA	107194407	107347116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383_107343561_107345577_107345644_107346753
ES.31624.17	chr7	+	4793	22	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	21	-3	intron_retention	FALSE	canonical	3	32	junction_3	6.70093234789501	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAAGTGTGAAACATTT	7266	False	NA	NA	False	AATAAA	-13	NA	107194434	107344089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337594_107337807_107337897_107338393_107339841_107342112_107342302_107343383
ES.31624.18	chr7	+	3197	24	NNC	ENSMUSG00000036528.17	novel	706	3	NA	NA	-1265	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6256999707959	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTGTGAAACATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	107204785	107344091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107204821_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.19	chr7	+	3407	24	NNC	ENSMUSG00000036528.17	novel	706	3	NA	NA	11617	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.4650780687649	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGTGTGAAACATTTT	7985	False	NA	NA	False	AATAAA	-14	NA	107217667	107344090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107217914_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.2	chr7	+	2546	3	NNC	ENSMUSG00000051041.9	novel	1685	3	NA	NA	-13829	1447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCTCATCAGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	107152823	107191748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107153090_107189354_107189550_107189663
ES.31624.20	chr7	+	172	1	Intergenic	novelGene_25930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAATAGCTAAAG	NA	False	NA	NA	False	NA	NA	NA	107230037	107230209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_107230000_107230200
ES.31624.21	chr7	+	156	1	Intergenic	novelGene_25931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	107275977	107276133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_107276000_107276100
ES.31624.22	chr7	+	3082	22	NNC	ENSMUSG00000036528.17	novel	706	3	NA	NA	15399	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.9066665143101	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGAAACATTTTTAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	107279916	107344096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107280144_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.23	chr7	+	5677	15	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	32344	-1	intron_retention	FALSE	canonical	3	35	junction_10	7.07539571259417	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTGTGAAACATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	107296861	107344091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337897_107338393_107339841_107342112_107342302_107343383
ES.31624.24	chr7	+	2048	1	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-25376	4939	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATGTTCAGGGAGCA	NA	False	NA	NA	False	NA	NA	NA	107316736	107318784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107316700_107318800
ES.31624.25	chr7	+	1966	5	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	-5037	-2	intron_retention	FALSE	canonical	3	36	junction_1	11.4537111889553	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGTGTGAAACATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	107337075	107344090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.3	chr7	+	1384	2	NNC	ENSMUSG00000051041.9	novel	1685	3	NA	NA	-13741	270	intron_retention	FALSE	canonical	1	1	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTATATTAGTTACATTT	NA	False	NA	NA	False	TATAAA	-15	NA	107152911	107190571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107153079_107189354
ES.31624.4	chr7	+	2753	3	NNC	ENSMUSG00000051041.9	novel	1685	3	NA	NA	-13633	1447	intron_retention	FALSE	canonical	0	0	junction_1	6	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCTCATCAGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	107153019	107191748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107153090_107170243_107170533_107189354
ES.31624.5	chr7	+	172	1	Intergenic	novelGene_25928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATCTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107166038	107166210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_107166000_107166200
ES.31624.6	chr7	+	3826	24	Fusion	ENSMUSG00000036528.17_ENSMUSG00000051041.9	novel	699	4	NA	NA	-14	8	multi-exon	FALSE	canonical	0	0	junction_2	13.7488958140594	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTTTTAATTTTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	107166638	107344100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_107167102_107170243_107170533_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ES.31624.7	chr7	+	1698	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	-14	1	-14	-1	multi-exon	FALSE	canonical	2	7	junction_1	2.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACTGCCTTAAGTATCT	NA	False	NA	NA	False	AATACA	-23	NA	107166638	107190300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_107167102_107170243_107170533_107189354
ES.31624.8	chr7	+	3147	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	-12	-1450	-12	1450	multi-exon	FALSE	canonical	2	7	junction_1	2.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATCAGGTTCTATT	NA	False	NA	NA	False	AATAAA	-17	NA	107166640	107191751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_107167102_107170243_107170533_107189354
ES.31624.9	chr7	+	3078	4	NNC	ENSMUSG00000051041.9	novel	699	4	NA	NA	-11	1450	intron_retention	FALSE	canonical	0	0	junction_3	4.92160768674447	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATCAGGTTCTATT	NA	False	NA	NA	False	AATAAA	-17	NA	107166641	107191751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_107167102_107170243_107170533_107189354_107191384_107191451
ES.31625.1	chr7	-	4059	3	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	5577	3569	intron_retention	FALSE	canonical	0	0	junction_1	21.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAATATTGTTTTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	107351626	107344092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107347963_107350373_107350474_107351537
ES.31625.10	chr7	-	1187	9	FSM	ENSMUSG00000048065.9	ENSMUST00000208217.2	1178	9	-9	0	-9	0	multi-exon	FALSE	canonical	2	13	junction_8	13.026415470113	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357212	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ES.31625.11	chr7	-	1280	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	11.9484489411289	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357212	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356818_107356912_107357164
ES.31625.12	chr7	-	1825	6	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	681	0	intron_retention	FALSE	canonical	1	1	junction_2	22.6132704401641	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107356522	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107350470_107351537_107351624_107353052_107353183_107353910_107354018_107356117_107356191_107356391
ES.31625.14	chr7	-	1340	10	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.77651506998175	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357240	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
ES.31625.15	chr7	-	3386	3	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	7	-4122	intron_retention	FALSE	canonical	3	16	junction_1	7	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGAAGTATTTACT	NA	False	NA	NA	False	NA	NA	NA	107357232	107353293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107356519_107356818_107356912_107357164
ES.31625.2	chr7	-	1244	10	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	-62	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4113781667882	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCGGTGGACTCACAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	107357301	107347655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107347963_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356818_107356912_107357164
ES.31625.3	chr7	-	2690	9	FSM	ENSMUSG00000048065.9	ENSMUST00000208217.2	1178	9	-2	-1510	-2	0	multi-exon	FALSE	canonical	2	13	junction_8	13.026415470113	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAATCGGTGGACTC	NA	False	NA	NA	False	AATAAA	-12	NA	107357205	107347661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ES.31625.4	chr7	-	4489	6	NNC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	-2	5	intron_retention	FALSE	canonical	3	29	junction_4	9.70360757656656	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTGTGGATATGTAGA	NA	False	NA	0	True	AATAAA	-24	NA	107357205	107349166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
ES.31625.5	chr7	-	3314	6	NIC	ENSMUSG00000048065.9	novel	2772	9	NA	NA	-18	3	intron_retention	FALSE	canonical	2	13	junction_5	14.0513344562002	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAATGTGTGGATATGTA	NA	False	NA	-2	True	AATAAA	-22	NA	107357221	107349168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_107350474_107351537_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ES.31625.6	chr7	-	2218	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	4	0	intron_retention	FALSE	canonical	2	3	junction_8	14.9410299176462	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357199	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357015
ES.31625.7	chr7	-	1969	8	NIC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	15	0	intron_retention	FALSE	canonical	2	13	junction_7	12.1705566421422	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357224	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ES.31625.8	chr7	-	2156	9	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	-47	0	intron_retention	FALSE	canonical	3	29	junction_7	8.01171017948103	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357286	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107356786_107356912_107357164
ES.31625.9	chr7	-	1892	7	NNC	ENSMUSG00000048065.9	novel	1178	9	NA	NA	15	0	intron_retention	FALSE	canonical	1	3	junction_1	19.1173278002503	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357224	107349171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_107350470_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356391_107356519_107357164
ES.31626.1	chr7	-	825	1	Intergenic	novelGene_25932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	107602533	107601708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_107601700_107602500
ES.31627.1	chr7	-	190	1	Intergenic	novelGene_25933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAATGACAAA	NA	False	NA	NA	False	NA	NA	NA	107871148	107870958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_107871000_107871100
ES.31628.1	chr7	-	4531	1	Intergenic	novelGene_25934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	108275423	108270892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_108270900_108275400
ES.31629.1	chr7	+	1315	9	NNC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	-158	681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	796.826822073027	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533465	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108533690_108533784_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.10	chr7	+	3185	6	NIC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	3	681	intron_retention	FALSE	canonical	3	2245	junction_2	109.377511399739	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533626	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108534015_108536952_108537024_108537242_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.11	chr7	+	1338	1	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	7192	5	1301	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTCTGCAGAGAG	NA	False	NA	NA	False	TATAAA	-9	NA	108540815	108542153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_108540800_108542200
ES.31629.2	chr7	+	1394	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	-136	1256	-136	687	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATGCGAGTTTATTGT	NA	False	NA	NA	False	AATAAA	-29	NA	108533487	108540902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.3	chr7	+	1672	7	NIC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	-127	681	intron_retention	FALSE	canonical	3	2245	junction_2	100.338455018779	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533496	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108534015_108536952_108537024_108537242_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.4	chr7	+	3264	6	NIC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	-7	681	intron_retention	FALSE	canonical	3	2245	junction_2	123.562130120842	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533616	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108539988_108540100_108540215_108540667
ES.31629.5	chr7	+	1471	7	NIC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	0	681	intron_retention	FALSE	canonical	3	2258	junction_2	96.7826889938944	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533623	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108534015_108536952_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.7	chr7	+	1114	7	NIC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	0	681	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	906.131597629297	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533623	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108534015_108536952_108537024_108537242_108537323_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.8	chr7	+	1067	9	NNC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	0	681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	796.826822073027	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533623	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108533686_108533870_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ES.31629.9	chr7	+	1268	8	NNC	ENSMUSG00000031029.7	novel	2514	8	NA	NA	2	681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	829.12668587164	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATCTGATGCGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	108533625	108540896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540082_108540215_108540667
ES.3163.1	chr10	+	189	1	Intergenic	novelGene_2480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTCAACTAA	4428	False	NA	NA	False	NA	NA	NA	76721698	76721887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76721700_76721900
ES.31630.1	chr7	+	5810	12	NIC	ENSMUSG00000031028.15	novel	772	4	NA	NA	-147	-135	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	6.12676016199791	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATGTATTTATTTAT	NA	False	NA	2	True	AATAAA	-16	NA	108549716	108633532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108549979_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.10	chr7	+	6011	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-14	0	-14	0	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	108610017	108633667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.11	chr7	+	6407	11	ISM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-13	1	-13	-1	intron_retention	FALSE	canonical	3	8	junction_1	5.2687759489278	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGTCCTTGGTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	108610018	108633666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760
ES.31630.12	chr7	+	4752	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	38	1207	38	-1207	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108610069	108632460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.13	chr7	+	6857	10	NIC	ENSMUSG00000031028.15	novel	5997	12	NA	NA	40	-135	intron_retention	FALSE	canonical	3	8	junction_1	5.53774924194538	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATGTATTTATTTAT	NA	False	NA	2	True	AATAAA	-16	NA	108610071	108633532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108627078_108628468_108628568_108628760
ES.31630.14	chr7	+	6209	10	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	1918	-137	intron_retention	FALSE	canonical	0	0	junction_1	8.48528137423857	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAATGTATTTATTT	6390	False	NA	0	True	AATAAA	-14	NA	108618666	108633530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108618861_108619723_108619776_108620073_108620237_108621816_108621961_108624814_108624934_108625796_108625995_108626209_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.15	chr7	+	5817	12	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2755	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.49078868019691	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	7227	False	NA	15	True	ATTAAA	-15	NA	108619503	108633667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.16	chr7	+	5684	12	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2755	-133	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.49078868019691	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTATTTATTTATTG	7227	False	NA	4	True	AATAAA	-18	NA	108619503	108633534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.17	chr7	+	6159	11	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2810	-1	intron_retention	FALSE	canonical	3	7	junction_1	5.49636243346452	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGTCCTTGGTTTT	7282	False	NA	14	True	ATTAAA	-14	NA	108619558	108633666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760
ES.31630.18	chr7	+	5960	9	NNC	ENSMUSG00000031028.15	novel	772	4	NA	NA	2827	103	intron_retention	FALSE	canonical	0	0	junction_7	9.33324032691755	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGGCCCAGAGCACG	7299	False	NA	118	True	NA	NA	NA	108619575	108633770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108624814_108624934_108625796_108625995_108626209_108626323_108628468_108628568_108628760
ES.31630.2	chr7	+	5820	12	NIC	ENSMUSG00000031028.15	novel	772	4	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	6.12676016199791	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCCTTGGTTTTCA	NA	False	NA	16	True	ATTAAA	-16	NA	108549842	108633668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108549979_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.3	chr7	+	5828	12	NNC	ENSMUSG00000031028.15	novel	772	4	NA	NA	23	-139	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7.75556318590588	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGCAAATGTATTTAT	NA	False	NA	-2	True	AATAAA	-12	NA	108549886	108633528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108549979_108619723_108619776_108619881_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.4	chr7	+	6148	11	NIC	ENSMUSG00000031028.15	novel	772	4	NA	NA	47	-1	intron_retention	FALSE	canonical	1	4	junction_1	6.21610810716802	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGTCCTTGGTTTT	NA	False	NA	14	True	ATTAAA	-14	NA	108549910	108633666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108549979_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760
ES.31630.5	chr7	+	7266	9	NIC	ENSMUSG00000031028.15	novel	5997	12	NA	NA	-44	-3	intron_retention	FALSE	canonical	3	8	junction_1	5.52268050859363	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACGGCTGTGTCCTTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	108609987	108633664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108627078_108628468
ES.31630.6	chr7	+	5900	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-36	133	-36	-133	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTATTTATTTATTG	NA	False	NA	4	True	AATAAA	-18	NA	108609995	108633534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ES.31630.7	chr7	+	7072	10	NIC	ENSMUSG00000031028.15	novel	5997	12	NA	NA	-35	5	intron_retention	FALSE	canonical	3	8	junction_1	5.53774924194538	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTTGGTTTTCATAGA	NA	False	NA	20	True	ATTAAA	-20	NA	108609996	108633672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108627078_108628468_108628568_108628760
ES.31630.8	chr7	+	6029	12	NNC	ENSMUSG00000031028.15	novel	5997	12	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	7.5918616713138	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACGGCTGTGTCCTTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	108610003	108633664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629323
ES.31630.9	chr7	+	6286	11	ISM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	-27	136	-27	-136	intron_retention	FALSE	canonical	3	8	junction_1	5.2687759489278	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAAATGTATTTATTTA	NA	False	NA	1	True	AATAAA	-15	NA	108610004	108633531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760
ES.31631.1	chr7	+	6211	1	Intergenic	novelGene_25935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-22	NA	108657715	108663926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_108657700_108663900
ES.31631.2	chr7	+	6191	2	Antisense	novelGene_ENSMUSG00000048330.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGGCTTTTTTGTGTTC	NA	False	NA	NA	False	AATATA	-45	NA	108657715	108663949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_108659201_108659243
ES.31632.1	chr7	+	148	1	Intergenic	novelGene_25936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACCAAAGAACATAA	NA	False	NA	NA	False	NA	NA	NA	108700003	108700151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_108700000_108700200
ES.31633.1	chr7	-	5368	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	8	-95	-1	95	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAGGAAAAGACAATCA	NA	False	NA	NA	False	AATAAA	-16	NA	108682530	108633423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.11	chr7	-	4162	6	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-1	-1189	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	23.6845941489399	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGAGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	108682519	108634707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656113_108656989_108657217_108682369
ES.31633.12	chr7	-	4135	6	NNC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-1	-1190	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	25.2792404949199	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAATTGAGGATTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	108682539	108634708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656067_108656989_108657217_108682369
ES.31633.13	chr7	-	4552	7	NNC	ENSMUSG00000048330.15	novel	1633	6	NA	NA	-1	-1197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.3863157873789	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCTACACAATTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	108682530	108634715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108638091_108647157_108647301_108652670_108653150_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.14	chr7	-	3317	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	17	1947	-3	1689	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCTTTTAGATATG	NA	False	NA	NA	False	AATATA	-16	NA	108682521	108635465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.15	chr7	-	2660	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	8	-1035	-3	1035	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGTTTAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	108682521	108636119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.16	chr7	-	3467	5	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-2	874	intron_retention	FALSE	canonical	3	62	junction_1	2.23606797749979	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGTATCACTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	108682520	108636280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108657217_108682369
ES.31633.17	chr7	-	2427	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	10	-804	-1	804	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTCTTGTTTGAGCAG	NA	False	NA	NA	False	AAAAAG	-7	NA	108682519	108636350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.18	chr7	-	2851	5	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	257	intron_retention	FALSE	canonical	3	62	junction_1	2.23606797749979	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAACTCTGAATGTCT	NA	False	NA	NA	False	NA	NA	NA	108682521	108636897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108657217_108682369
ES.31633.19	chr7	-	1877	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	19	3385	-1	251	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTAGAGGCAACTCTGA	NA	False	NA	NA	False	NA	NA	NA	108682519	108636903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.2	chr7	-	5347	6	NNC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-2	41	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	25.2792404949199	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTCTAAAACTCCAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	108682520	108633477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656067_108656989_108657217_108682369
ES.31633.20	chr7	-	4242	4	NIC	ENSMUSG00000048330.15	novel	3258	5	NA	NA	3	27	intron_retention	FALSE	canonical	3	64	junction_3	1.63299316185545	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAAAAAACAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	108682509	108644561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108647304_108653571_108653666_108655950_108657217_108682369
ES.31633.21	chr7	-	1900	5	ISM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	-1	8801	-1	-1367	5prime_fragment	FALSE	canonical	3	26	junction_1	16.0312195418814	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAATTGCATCATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	108682530	108645955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.22	chr7	-	2701	4	NIC	ENSMUSG00000048330.15	novel	1633	6	NA	NA	-2	-1522	intron_retention	FALSE	canonical	3	26	junction_1	18.4028983224563	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCATACTTGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	108682520	108646110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108647301_108653571_108653666_108655950_108657217_108682369
ES.31633.23	chr7	-	2233	2	FSM	ENSMUSG00000048330.15	ENSMUST00000129629.2	469	2	-9	-1755	-3	1755	multi-exon	FALSE	canonical	1	2	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108682521	108678195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108680277_108682369
ES.31633.24	chr7	-	4323	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-1	1743	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108682530	108678207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108678200_108682500
ES.31633.25	chr7	-	3184	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	602	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTCTGGGCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	108682532	108679348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108679300_108682500
ES.31633.26	chr7	-	1045	2	FSM	ENSMUSG00000048330.15	ENSMUST00000129629.2	469	2	-8	-568	-2	568	multi-exon	FALSE	canonical	1	2	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108682520	108679382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108680277_108682369
ES.31633.3	chr7	-	5391	6	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-2	39	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	23.6845941489399	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTAAAACTCCAG	NA	False	NA	NA	False	AATAAA	-14	NA	108682520	108633479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656113_108656989_108657217_108682369
ES.31633.5	chr7	-	5353	7	NNC	ENSMUSG00000048330.15	novel	1633	6	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.4631065653946	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAAAGTTTATTCAAA	NA	False	NA	NA	False	AATAAA	-21	NA	108682513	108633527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108680167_108680277_108682369
ES.31633.6	chr7	-	5250	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	18	13	-2	-13	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATACCAAAAAGTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	108682520	108633531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.7	chr7	-	4090	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	8	1183	-1	-1183	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATTTTTTCTTAAAC	NA	False	NA	NA	False	AATAAA	-29	NA	108682530	108634701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ES.31633.8	chr7	-	4626	8	NNC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-20851	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3687742827162	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATTTTTTCTTAAAC	NA	False	NA	NA	False	AATAAA	-29	NA	108703389	108634701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108699409_108699775_108700489_108700745_108703312
ES.31633.9	chr7	-	5054	5	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	-3	-1187	intron_retention	FALSE	canonical	3	62	junction_1	2.23606797749979	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGAGGATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	108682532	108634705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108657217_108682369
ES.31634.1	chr7	+	2131	1	Intergenic	novelGene_25937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTTTCTGACGAT	NA	False	NA	NA	False	NA	NA	NA	108764637	108766768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_108764600_108766800
ES.31635.1	chr7	-	973	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	44	-105	44	2	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACTGCATTGTTCACA	NA	False	NA	-2	True	ATTAAA	-20	NA	108774370	108737776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ES.31636.1	chr7	-	2202	12	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51263	21230	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.2979266980938	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGTTGTCCTGTTTCTT	NA	False	NA	NA	False	AGTAAA	-29	NA	108986761	108857199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108857671_108857738_108858435_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926860_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
ES.31636.11	chr7	-	1752	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51209	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCCTCACGTGTCC	NA	False	NA	-12	True	AATAAA	-28	NA	108986815	108878427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
ES.31636.12	chr7	-	3202	6	ISM	ENSMUSG00000031027.16	ENSMUST00000121748.8	2295	13	109083	0	109083	0	intron_retention	FALSE	canonical	3	45	junction_3	9.19565114605812	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	1234	False	NA	-14	True	AATAAA	-26	NA	108928941	108878429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798
ES.31636.13	chr7	-	2047	12	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51224	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.9444172074981	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	NA	False	NA	-14	True	AATAAA	-26	NA	108986800	108878429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
ES.31636.14	chr7	-	1036	7	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51249	-46983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4061258106698	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTTGTTATAAAAGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	108986775	108925784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108926197_108926798_108926860_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
ES.31636.2	chr7	-	1483	8	ISM	ENSMUSG00000031027.16	ENSMUST00000121748.8	2295	13	107265	-163	107265	163	3prime_fragment	FALSE	canonical	3	45	junction_3	8.39582014566578	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCATTTCATGTAAAGG	NA	False	NA	NA	False	AATAAA	-18	NA	108930759	108878266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675
ES.31636.3	chr7	-	2201	13	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51230	10	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	19.7188573029304	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	-4	True	AATAAA	-36	NA	108986794	108878419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108986659
ES.31636.4	chr7	-	6176	10	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51226	10	intron_retention	FALSE	canonical	3	34	junction_9	9.82940913537621	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	-4	True	AATAAA	-36	NA	108986798	108878419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108935353_108937526_108937641_108986659
ES.31636.5	chr7	-	1416	8	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51211	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.7444267794815	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	-4	True	AATAAA	-36	NA	108986813	108878419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108935247_108935353_108986659
ES.31636.6	chr7	-	2409	14	NNC	ENSMUSG00000031027.16	novel	2410	14	NA	NA	51216	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.2029889933356	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGTGTCCTTGTGATT	NA	False	NA	-4	True	AATAAA	-36	NA	108986808	108878419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_108952765_108952960_108986659
ES.31636.7	chr7	-	5774	7	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	106482	6	intron_retention	FALSE	canonical	0	0	junction_6	22.4258035902098	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCTCACGTGTCCTTGT	NA	False	NA	-8	True	AATAAA	-32	NA	108931542	108878423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926936_108926970
ES.31636.8	chr7	-	2456	5	ISM	ENSMUSG00000031027.16	ENSMUST00000121748.8	2295	13	111666	-2	111666	2	3prime_fragment	FALSE	canonical	3	45	junction_3	6.53356717268599	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCCTCACGTGTCC	3817	False	NA	-12	True	AATAAA	-28	NA	108926358	108878427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887
ES.31636.9	chr7	-	1677	11	NNC	ENSMUSG00000031027.16	novel	1304	11	NA	NA	51257	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	17.1642069435206	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCCTCACGTGTCC	NA	False	NA	-12	True	AATAAA	-28	NA	108986767	108878427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926860_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
ES.31637.1	chr7	+	1441	2	Antisense	novelGene_ENSMUSG00000031026.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTCAAATGGTTTATT	NA	False	NA	NA	False	NA	NA	NA	109046526	109049620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_109046656_109048308
ES.31638.1	chr7	+	177	1	Intergenic	novelGene_25938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGCGAACGGGGCC	NA	False	NA	NA	False	NA	NA	NA	109075731	109075908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109075700_109075900
ES.31639.1	chr7	-	9623	21	NNC	ENSMUSG00000031026.16	novel	9250	20	NA	NA	-281	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.36378933071456	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCCTAGAGTGTTTTT	NA	False	NA	2	True	AATAAA	-26	NA	109093226	109048207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109053242_109054233_109054453_109054838_109054992_109055268_109055344_109056252_109056380_109056754_109057042_109057317_109057493_109057947_109058009_109059364_109059558_109059699_109060222_109071440_109071603_109074258_109075167_109076844_109076963_109080132_109080280_109081089_109081205_109082238_109082356_109082844_109082978_109083784_109083933_109085253_109085358_109092174_109092287_109092513
ES.31639.2	chr7	-	6041	7	ISM	ENSMUSG00000031026.16	ENSMUST00000106739.8	9250	20	35499	3	16895	-3	3prime_fragment	FALSE	canonical	2	3	junction_1	1.25830573921179	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAACCGTGTCCTAGA	NA	False	NA	-6	True	AATAAA	-18	NA	109057446	109048215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109053242_109054208_109054453_109054838_109054992_109055268_109055344_109056252_109056380_109056754_109057042_109057317
ES.31639.3	chr7	-	3625	1	Genic_Genomic	ENSMUSG00000031026.16	novel	NA	NA	NA	NA	4676	2877	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTGTCTGTTTGTTA	NA	False	NA	NA	False	AATAAA	-14	NA	109069665	109066040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109066000_109069700
ES.3164.1	chr10	+	208	1	Intergenic	novelGene_2483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCTAAAAACTTTCTATA	NA	False	NA	NA	False	NA	NA	NA	76783256	76783464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76783300_76783500
ES.31640.1	chr7	+	175	1	Intergenic	novelGene_25939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	109098770	109098945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109098800_109098900
ES.31641.1	chr7	+	664	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	-93	587	-93	14	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCCTTGTCTGCATGT	NA	False	NA	16	True	ATTAAA	-28	NA	109118260	109120987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ES.31641.10	chr7	+	672	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	50	436	1	165	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTGATGAATGCCAT	NA	False	NA	NA	False	NA	NA	NA	109118403	109121138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ES.31641.12	chr7	+	333	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	3	6	combination_of_known_splicesites	FALSE	canonical	3	44	junction_3	6697.28616679921	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118408	109120979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109118430_109118791_109118856_109119124_109119201_109120807
ES.31641.13	chr7	+	735	5	NIC	ENSMUSG00000046364.15	novel	526	4	NA	NA	8	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6920.42061582965	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118434	109120979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109118683_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ES.31641.14	chr7	+	634	4	NIC	ENSMUSG00000046364.15	novel	526	4	NA	NA	-17	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6110.11036452425	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCATCCTTCCTTGT	NA	False	NA	8	True	ATTAAA	-20	NA	109118459	109120979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109118683_109118791_109118856_109119674_109119850_109120807
ES.31641.2	chr7	+	1110	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	-1	0	1	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTTTAAATCTGGAAGT	NA	False	NA	21	True	AATAAA	-25	NA	109118402	109121575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ES.31641.3	chr7	+	2571	1	FSM	ENSMUSG00000065016.3	ENSMUST00000083082.3	132	1	-924	-1515	-924	1515	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118400_109121000
ES.31641.4	chr7	+	982	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	7451	junction_1	3695.09593921457	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109118430_109118791_109118856_109119124_109119850_109120807
ES.31641.5	chr7	+	1452	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	49	-343	0	343	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTACAGGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	109118402	109121917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ES.31641.6	chr7	+	1719	4	FSM	ENSMUSG00000046364.15_ENSMUSG00000077575.3	ENSMUST00000156921.2	526	4	-24	-1169	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7943.43973911107	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109118683_109118791_109118856_109119124_109119201_109119674
ES.31641.8	chr7	+	1932	3	Fusion	ENSMUSG00000046364.15_ENSMUSG00000077575.3	novel	350	3	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	8212	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118402	109120973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_109118430_109118799_109118856_109119124
ES.31641.9	chr7	+	869	4	NIC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	12965	junction_3	1855.24883027108	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCTTTGCATCCTT	NA	False	NA	2	True	ATTAAA	-14	NA	109118403	109120973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109118856_109119124_109119201_109119674_109119850_109120807
ES.31642.1	chr7	-	815	1	Antisense	novelGene_ENSMUSG00000077575.3_AS_novelGene_ENSMUSG00000046364.15_AS_novelGene_ENSMUSG00002074947.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	AATATA	-29	NA	109121112	109120297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_109120300_109121100
ES.31643.1	chr7	+	4053	1	Antisense	novelGene_ENSMUSG00000031024.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGGGGATTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	109124584	109128637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_109124600_109128600
ES.31644.1	chr7	+	5055	1	Intergenic	novelGene_25940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	109245982	109251037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109246000_109251000
ES.31645.1	chr7	+	145	1	Intergenic	novelGene_25944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	109264165	109264310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109264200_109264300
ES.31646.1	chr7	+	272	1	Intergenic	novelGene_25945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTATTAAAAGCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	109264665	109264937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109264700_109264900
ES.31647.1	chr7	+	186	1	Intergenic	novelGene_25946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTTTCATTAAAA	NA	False	NA	NA	False	NA	NA	NA	109267280	109267466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109267300_109267500
ES.31648.1	chr7	+	4062	1	Intergenic	novelGene_25947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAATTAAGAAAATGCCT	NA	False	NA	NA	False	NA	NA	NA	109276532	109280594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109276500_109280600
ES.31648.2	chr7	+	163	1	Intergenic	novelGene_25948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTTTAAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	109279584	109279747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109279600_109279700
ES.31649.1	chr7	-	4383	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-36	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	59.6347214297174	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	False	NA	2	True	AATAAA	-26	NA	109302848	109123117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144460_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.10	chr7	-	4244	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-32	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	57.9035878401722	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCTTATTGTGTTCC	NA	False	NA	-4	True	AATAAA	-20	NA	109302844	109123123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109216264_109216355_109302744
ES.31649.11	chr7	-	4333	8	NIC	ENSMUSG00000031024.14	novel	3004	19	NA	NA	670	3	intron_retention	FALSE	canonical	3	183	junction_7	26.0541038328055	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCTTATTGTGTTCC	NA	False	NA	-4	True	AATAAA	-20	NA	109138970	109123123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140
ES.31649.12	chr7	-	4302	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	17143	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	52.6279393478407	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCTTATTGTGTTCC	NA	False	NA	-4	True	AATAAA	-20	NA	109254150	109123123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109254097
ES.31649.13	chr7	-	6086	10	NIC	ENSMUSG00000031024.14	novel	3004	19	NA	NA	174	2	intron_retention	FALSE	canonical	3	183	junction_8	22.5130963257576	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGTCTTATTGTGTTC	NA	False	NA	-5	True	AATAAA	-19	NA	109139466	109123124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868
ES.31649.14	chr7	-	4109	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	61.069326211103	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGTCTTATTGTGTTC	NA	False	NA	-5	True	AATAAA	-19	NA	109302821	109123124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.15	chr7	-	4771	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	2245	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	82.8285117473243	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGTCTTATTGTGTTC	NA	False	NA	-5	True	AATAAA	-19	NA	109213353	109123124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109148055_109148151_109152181_109152319_109155417_109156669_109169213_109169319_109212223_109212356_109212967
ES.31649.16	chr7	-	4438	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_20	52.2751374938412	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGAGTCTTATTGTGTT	NA	False	NA	-6	True	AATAAA	-18	NA	109302793	109123125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302602
ES.31649.17	chr7	-	4377	20	NNC	ENSMUSG00000031024.14	novel	4612	20	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	55.4999937610737	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGAGTCTTATTGTGTT	NA	False	NA	-6	True	AATAAA	-18	NA	109215727	109123125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156662_109169209_109169319_109215504
ES.31649.18	chr7	-	4316	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	83	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	53.1594535336849	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGAGTCTTATTGTGTT	NA	False	NA	-6	True	AATAAA	-18	NA	109271477	109123125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109271408
ES.31649.19	chr7	-	4342	19	NIC	ENSMUSG00000031024.14	novel	4612	20	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	52.0094958091403	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215795	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109215504
ES.31649.2	chr7	-	4576	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	2918	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	64.4152738098659	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTATTGTGTTCCTTTCA	NA	False	NA	1	True	AATAAA	-25	NA	109212680	109123118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109212223_109212619_109212663
ES.31649.20	chr7	-	4410	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	65.5111075728346	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302799	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109236513_109236623_109302744
ES.31649.21	chr7	-	4481	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	53.1594535336849	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109271208	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109270973
ES.31649.22	chr7	-	3261	19	FSM	ENSMUSG00000031024.14	ENSMUST00000084738.5	3161	19	-100	0	-100	0	multi-exon	FALSE	canonical	2	7	junction_17	55.6475072373273	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215860	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109215504
ES.31649.23	chr7	-	4514	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	63.433754971949	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302847	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109286448_109286614_109302744
ES.31649.24	chr7	-	4409	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.6413674114598	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302790	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109286269_109286387_109302744
ES.31649.25	chr7	-	3057	18	NIC	ENSMUSG00000031024.14	novel	4612	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	53.2866505611648	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215761	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109215504
ES.31649.26	chr7	-	4042	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.1979186262387	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302825	109123126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156088_109156372_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.27	chr7	-	4841	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	17	-1	intron_retention	FALSE	canonical	3	65	junction_19	43.2111994306185	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAGAGTCTTATTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	109302795	109123127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.29	chr7	-	4262	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	70.9502642701209	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAGAGTCTTATTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	109302793	109123127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139025_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144433_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.30	chr7	-	4947	4	ISM	ENSMUSG00000031024.14	ENSMUST00000084738.5	3161	19	86468	1	10348	-1	intron_retention	FALSE	canonical	3	213	junction_3	24.0554914035583	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAGAGTCTTATTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	109129292	109123127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432
ES.31649.31	chr7	-	4299	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	113	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	53.1594535336849	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAGAGTCTTATTGTG	NA	False	NA	-8	True	AATAAA	-16	NA	109271180	109123127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109271126
ES.31649.32	chr7	-	4217	23	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	69.5240608805492	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109302822	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156088_109156372_109156669_109169213_109169319_109215504_109215685_109216264_109216355_109302744
ES.31649.33	chr7	-	5365	19	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	151	-2	intron_retention	FALSE	canonical	0	0	junction_6	69.1713965361798	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109271142	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126941_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109271126
ES.31649.34	chr7	-	4492	23	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	74.2730749964042	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109302825	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109283718_109283807_109284183_109284263_109302744
ES.31649.35	chr7	-	4255	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	59.59150526711	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109302791	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140604_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.37	chr7	-	4134	19	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-26784	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_18	50.5874441553716	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	8939	False	NA	-9	True	AATAAA	-15	NA	109166424	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109166339
ES.31649.38	chr7	-	4912	19	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	36	-2	intron_retention	FALSE	canonical	3	65	junction_18	44.0416469567916	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109302776	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.39	chr7	-	4425	22	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.6413674114598	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAAGAGTCTTATTGT	NA	False	NA	-9	True	AATAAA	-15	NA	109302821	109123128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302235_109302340_109302744
ES.31649.4	chr7	-	4461	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-187	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_19	49.7955932591755	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTATTGTGTTCCTTTC	NA	False	NA	0	True	AATAAA	-24	NA	109202059	109123119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109201761
ES.31649.40	chr7	-	3513	17	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-16304	-3	intron_retention	FALSE	canonical	3	171	junction_14	24.9141494687256	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTGAAGAGTCTTATTG	NA	False	NA	-10	True	AATAAA	-14	NA	109155944	109123129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417
ES.31649.41	chr7	-	3662	21	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-6	-364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.652706672412	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGGCCAGGTGCTTTC	NA	False	NA	NA	False	AAGAAA	-24	NA	109302818	109123629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156514_109169213_109169319_109216264_109216355_109302744
ES.31649.42	chr7	-	4459	5	NNC	ENSMUSG00000031024.14	novel	553	4	NA	NA	19	-399	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	91.2756813176434	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGGAGGGGTGAGAGA	NA	False	NA	NA	False	NA	NA	NA	109302793	109152618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109156669_109169213_109169319_109216264_109216355_109286448_109286614_109302744
ES.31649.43	chr7	-	209	1	Intergenic	novelGene_25941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTTTGTATTCAGAC	NA	False	NA	NA	False	NA	NA	NA	109250153	109249944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109249900_109250200
ES.31649.44	chr7	-	356	1	Intergenic	novelGene_25942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGTAAGCATTCACA	NA	False	NA	NA	False	AATATA	-44	NA	109256755	109256399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109256400_109256800
ES.31649.45	chr7	-	199	1	Intergenic	novelGene_25943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCAGCTTCCATATAT	NA	False	NA	NA	False	NA	NA	NA	109260097	109259898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109259900_109260100
ES.31649.5	chr7	-	5089	21	NIC	ENSMUSG00000031024.14	novel	4612	20	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	44.7269493705976	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTATTGTGTTCCTTT	NA	False	NA	-1	True	AATAAA	-23	NA	109302821	109123120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504_109216355_109302744
ES.31649.6	chr7	-	4371	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-51	-3	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTATTGTGTTCCTTT	NA	False	NA	-1	True	AATAAA	-23	NA	109302863	109123120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
ES.31649.7	chr7	-	3066	20	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	59.0346628070525	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTATTGTGTTCCTTT	NA	False	NA	-1	True	AATAAA	-23	NA	109302809	109123120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264_109216355_109302744
ES.31649.8	chr7	-	4576	20	NNC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	2215	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_19	50.3843949811619	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCTTATTGTGTTCCT	NA	False	NA	-3	True	AATAAA	-21	NA	109213383	109123122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109212967
ES.31649.9	chr7	-	4315	19	NNC	ENSMUSG00000031024.14	novel	4612	20	NA	NA	88	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.2145081625894	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCTTATTGTGTTCC	NA	False	NA	-4	True	AATAAA	-20	NA	109215872	109123123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140538_109140640_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
ES.3165.1	chr10	+	589	1	Intergenic	novelGene_2484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76784559	76785148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76784600_76785100
ES.31650.1	chr7	+	1044	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	-24	8	-24	-8	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302872	109311388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.10	chr7	+	961	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	49	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.074805440417	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATAAAAAGACAATG	NA	False	NA	NA	False	AATAAA	-42	NA	109303007	109311413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109303236_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.11	chr7	+	1245	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	56	-12	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	171.1906831577	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAAGAATTCATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	109303014	109311384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109303556_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.12	chr7	+	2579	6	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	56	9059	intron_retention	FALSE	canonical	0	0	junction_4	197.832656555989	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTGCCTATGTATGCG	NA	False	NA	NA	False	NA	NA	NA	109303014	109320455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109304239_109306604_109306719_109308147_109308229_109310956_109311349_109315891_109316002_109319797
ES.31650.13	chr7	+	647	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	120	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.074805440417	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109303078	109311170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109303236_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.2	chr7	+	758	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	44	226	-18	-5	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109302940	109311170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.3	chr7	+	1100	7	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	172.80118633852	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAAAAGAATTCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	109302959	109311383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310110_109310259_109310956
ES.31650.4	chr7	+	3855	4	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	5	-3	intron_retention	FALSE	canonical	3	347	junction_1	29.8254179443567	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATTTTATTGCTATT	NA	False	NA	NA	False	AATAAA	-22	NA	109302963	109311393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147
ES.31650.5	chr7	+	1129	6	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	162.294300577685	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTCATTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	109302965	109311388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109302984_109303152_109303556_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.6	chr7	+	1073	5	NNC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	14	-5	intron_retention	FALSE	canonical	3	9	junction_1	171.1906831577	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109302972	109311170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109303556_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.7	chr7	+	1129	5	NIC	ENSMUSG00000031023.6	novel	1028	6	NA	NA	23	17	intron_retention	FALSE	canonical	3	347	junction_1	28.0624304008046	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATAAAAAGACAATG	NA	False	NA	NA	False	AATAAA	-42	NA	109302981	109311413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.8	chr7	+	884	5	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	87	226	25	-5	3prime_fragment	FALSE	canonical	3	347	junction_1	28.0624304008046	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109302983	109311170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ES.31650.9	chr7	+	3593	4	ISM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	106	226	44	-5	intron_retention	FALSE	canonical	3	347	junction_1	29.8254179443567	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGATGCATCAATCTT	NA	False	NA	NA	False	AATAAA	-20	NA	109303002	109311170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109303378_109304157_109304239_109306604_109306719_109308147
ES.31651.1	chr7	+	2124	1	FSM	ENSMUSG00000109147.2	ENSMUST00000207761.2	2959	1	13	822	13	-576	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATATTTTGAATGTATT	NA	False	NA	NA	False	NA	NA	NA	109351539	109353663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109351500_109353700
ES.31652.1	chr7	-	1683	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	18	2	-15	0	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAATGTTTCTGTTCTCC	NA	False	NA	0	True	AATAAA	-17	NA	109351468	109335042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ES.31652.2	chr7	-	1702	5	NIC	ENSMUSG00000031021.14	novel	1703	5	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	49.8315913853852	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAATGTTTCTGTTCTC	NA	False	NA	-1	True	AATAAA	-16	NA	109351468	109335043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349332_109351277
ES.31652.3	chr7	-	1611	5	FSM	ENSMUSG00000031021.14	ENSMUST00000118571.2	1771	5	153	7	153	-7	multi-exon	FALSE	canonical	0	0	junction_4	51.1150662720885	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCAATCAATGTTTCT	NA	False	NA	-7	True	AATAAA	-10	NA	109351929	109335049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351803
ES.31652.4	chr7	-	1456	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	32	215	-1	-213	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAAGCCTCCCTGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	109351454	109335255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ES.31652.5	chr7	-	964	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	7	732	7	-730	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCCGTGCCTGGAACAA	NA	False	NA	NA	False	AATAAA	-26	NA	109351479	109335772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ES.31652.6	chr7	-	3426	2	ISM	ENSMUSG00000031021.14	ENSMUST00000128043.2	353	3	-508	-619	121	619	intron_retention	FALSE	canonical	3	106	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAAAACAAAATT	NA	False	NA	NA	False	NA	NA	NA	109351961	109343941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109344626_109349219
ES.31653.1	chr7	+	186	1	Intergenic	novelGene_25949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	109376033	109376219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109376000_109376200
ES.31654.1	chr7	-	3963	8	FSM	ENSMUSG00000034825.15	ENSMUST00000041460.13	3927	8	-36	0	-36	0	multi-exon	FALSE	canonical	1	2	junction_7	5.70356136505061	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTGAGTCTCTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	109381268	109357261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506_109380668_109381134
ES.31654.3	chr7	-	3890	7	NIC	ENSMUSG00000034825.15	novel	3910	7	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	5.67646212197547	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTCTGAGTCTCTG	NA	False	NA	-3	True	AATAAA	-17	NA	109380751	109357263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365821_109380506
ES.31654.4	chr7	-	2047	7	NNC	ENSMUSG00000034825.15	novel	3910	7	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.57647321898295	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGTCTGAGTCTCTG	NA	False	NA	-3	True	AATAAA	-17	NA	109380751	109357263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109358533_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506
ES.31654.5	chr7	-	6448	2	Genic_Genomic	ENSMUSG00000119024.1	novel	107	1	NA	NA	-2714	3827	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTATAGGAACTGAAG	NA	False	NA	NA	False	ATTAAA	-12	NA	109376639	109369991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109370437_109370636
ES.31654.6	chr7	-	3522	1	Genic_Genomic	ENSMUSG00000034825.15	novel	NA	NA	NA	NA	-36	-12020	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGACTTTACTCTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	109381268	109377746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109377700_109381300
ES.31654.7	chr7	-	3957	7	NNC	ENSMUSG00000034825.15	novel	3927	8	NA	NA	-7746	-13311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.21108319357027	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATAGCTCTTTCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	109388978	109379037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109380668_109381134_109381277_109382506_109384072_109385014_109385173_109387216_109387299_109388240_109388571_109388928
ES.31654.8	chr7	-	1315	1	Intergenic	novelGene_25950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAAAGGGTATACAGGT	NA	False	NA	NA	False	AAAAAG	-36	NA	109388982	109387667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109387700_109389000
ES.31655.1	chr7	+	188	1	Intergenic	novelGene_25951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATCTCC	NA	False	NA	NA	False	NA	NA	NA	109427847	109428035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109427800_109428000
ES.31656.1	chr7	-	5276	23	NNC	ENSMUSG00000007279.15	novel	3563	22	NA	NA	-14	1892	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.12083329950695	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTTTTGATTGT	NA	False	NA	0	True	NA	NA	NA	109464900	109395990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109396567_109396773_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31656.2	chr7	-	5255	23	NNC	ENSMUSG00000007279.15	novel	3563	22	NA	NA	1	1886	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.12083329950695	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTATTTTATGTGTTTT	NA	False	NA	-6	True	NA	NA	NA	109464885	109395996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109396573_109396779_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31656.3	chr7	-	5466	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	-5	-1898	-5	1884	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTATTTTATGTGTT	NA	False	NA	-8	True	NA	NA	NA	109464891	109395998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31656.4	chr7	-	4904	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	-21	-1320	-21	1306	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGAATGTCTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	109464907	109396576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31656.5	chr7	-	3167	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	-6	402	-6	2	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTTTTCTTTCCCAAC	NA	False	NA	NA	False	GATAAA	-6	NA	109464892	109398298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31656.6	chr7	-	1398	10	NNC	ENSMUSG00000007279.15	novel	3571	22	NA	NA	-2	-35745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.06080411011016	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATGTCTGTGTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	109464852	109435601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109435857_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ES.31657.1	chr7	-	159	1	Intergenic	novelGene_25952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8493	False	NA	NA	False	NA	NA	NA	109485559	109485400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109485400_109485600
ES.31658.1	chr7	+	2127	2	Antisense	novelGene_ENSMUSG00000035901.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTACCATTCCTACATG	NA	False	NA	NA	False	NA	NA	NA	109519129	109526571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_109520718_109526032
ES.31658.2	chr7	+	174	1	Intergenic	novelGene_25953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	0	True	NA	NA	False	NA	NA	NA	109521088	109521262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109521100_109521300
ES.31659.1	chr7	+	179	1	Intergenic	novelGene_25954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATAAGTTCGGAAC	NA	False	NA	NA	False	NA	NA	NA	109550298	109550477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109550300_109550500
ES.3166.1	chr10	-	1821	12	NNC	ENSMUSG00000001120.16	novel	1748	14	NA	NA	-58	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	52.0984446397807	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTCTCTCTGCTACC	NA	False	NA	2	True	AATAAA	-23	NA	76661761	76597685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606794_76606874_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76636569_76636749_76661693
ES.3166.11	chr10	-	3323	15	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	1	1	intron_retention	FALSE	canonical	1	1	junction_2	34.8670945981205	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	1138	False	NA	-2	True	AATAAA	-19	NA	76797720	76597689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599219_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.12	chr10	-	2229	17	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.126585115796	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1145	False	NA	-3	True	AATAAA	-18	NA	76797713	76597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76644220_76644349_76661693_76661827_76728390_76728491_76797581
ES.3166.13	chr10	-	2171	16	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.7172229965202	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1075	False	NA	-3	True	AATAAA	-18	NA	76797783	76597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.14	chr10	-	2103	14	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	45.1018571102444	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1086	False	NA	-3	True	AATAAA	-18	NA	76797772	76597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76636569_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.15	chr10	-	3416	15	NIC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_6	37.6591182009546	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1117	False	NA	-3	True	AATAAA	-18	NA	76797741	76597690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.17	chr10	-	3377	15	NIC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-48	0	intron_retention	FALSE	canonical	3	60	junction_5	18.9273584517012	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTGACTTCTCTCT	1089	False	NA	-4	True	AATAAA	-17	NA	76797769	76597691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.18	chr10	-	2220	15	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	44.6567978233632	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTCTGACTTCTCTC	1087	False	NA	-5	True	AATAAA	-16	NA	76797771	76597692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76636578_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.19	chr10	-	2371	17	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	43.6763218889824	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGCTCTGACTTCTCT	1138	False	NA	-6	True	AATAAA	-15	NA	76797720	76597693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76792054_76792321_76797581
ES.3166.2	chr10	-	6553	13	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	-49	5	intron_retention	FALSE	canonical	0	0	junction_9	40.8350339781908	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTCTCTCTGCTACC	1088	False	NA	2	True	AATAAA	-23	NA	76797770	76597685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76625704_76633628_76633746_76634460_76634494_76636573_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.20	chr10	-	2596	19	FSM	ENSMUSG00000001120.16	ENSMUST00000105411.9	2544	19	-52	0	-52	0	multi-exon	FALSE	canonical	0	0	junction_14	50.6295246415775	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGCTCTGACTTCTCT	1085	False	NA	-6	True	AATAAA	-15	NA	76797773	76597693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76683569_76683647_76685210_76685445_76686055_76686183_76728390_76728491_76797581
ES.3166.21	chr10	-	6226	5	ISM	ENSMUSG00000001120.16	ENSMUST00000168465.9	1748	14	49633	2	12186	0	3prime_fragment	FALSE	canonical	3	103	junction_4	11.5758369027902	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGCTCTGACTTCTCT	2691	False	NA	-6	True	AATAAA	-15	NA	76612070	76597693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794
ES.3166.22	chr10	-	1795	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-119	337	-20	38	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACAGCACTTCCTATGT	1117	False	NA	NA	False	TTTAAA	-15	NA	76797741	76598027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.23	chr10	-	1670	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	-172	515	-73	-2	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGATAGTGCGTGT	1064	False	NA	NA	False	AATAGA	-14	NA	76797794	76598205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.24	chr10	-	3911	1	Intergenic	novelGene_2478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACACACACACACACAGG	NA	False	NA	NA	False	NA	NA	NA	76648411	76644500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76644500_76648400
ES.3166.25	chr10	-	3153	1	Intergenic	novelGene_2479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTAAAAAAAAAAACCAAAAA	3584	False	NA	NA	False	NA	NA	NA	76708073	76704920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76704900_76708100
ES.3166.26	chr10	-	3834	2	Intergenic	novelGene_2481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCCTTGTAAGCAT	NA	False	NA	NA	False	NA	NA	NA	76783743	76779694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76783253_76783467
ES.3166.27	chr10	-	2921	1	Intergenic	novelGene_2482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76783544	76780623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76780600_76783500
ES.3166.3	chr10	-	3156	16	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-22	3	intron_retention	FALSE	canonical	0	0	junction_9	43.406399937746	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1115	False	NA	0	True	AATAAA	-21	NA	76797743	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76629870_76630021_76633628_76633746_76634460_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.4	chr10	-	2299	17	NNC	ENSMUSG00000001120.16	novel	2544	19	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.9532679906309	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1137	False	NA	0	True	AATAAA	-21	NA	76797721	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76640653_76640769_76661693_76661827_76728390_76728491_76797581
ES.3166.5	chr10	-	2065	15	NIC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-50	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	33.7097454569967	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1087	False	NA	0	True	AATAAA	-21	NA	76797771	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76797581
ES.3166.6	chr10	-	2226	16	NIC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-42	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	33.9616777494216	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1095	False	NA	0	True	AATAAA	-21	NA	76797763	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.7	chr10	-	2171	15	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	35.3522363117936	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1081	False	NA	0	True	AATAAA	-21	NA	76797777	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76636569_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.8	chr10	-	2166	16	NNC	ENSMUSG00000001120.16	novel	2013	16	NA	NA	-58	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.9506831873659	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTCTCTCTGCTA	1079	False	NA	0	True	AATAAA	-21	NA	76797779	76597687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76598361_76599055_76599219_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ES.3166.9	chr10	-	7158	8	ISM	ENSMUSG00000001120.16	ENSMUST00000168465.9	1748	14	31472	-3	3467	2	intron_retention	FALSE	canonical	3	60	junction_5	21.6973618259014	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGACTTCTCTCTGCT	NA	False	NA	-1	True	AATAAA	-20	NA	76630231	76597688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224
ES.31660.1	chr7	-	5020	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	-16	0	-16	0	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559693	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.10	chr7	-	4912	22	FSM	ENSMUSG00000035901.15	ENSMUST00000106722.2	4862	22	-50	0	20	0	multi-exon	FALSE	canonical	2	3	junction_21	36.294961951193	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559657	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109559280
ES.31660.11	chr7	-	4908	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.9229080316738	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559604	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495617_109496153_109496278_109497114_109497177_109497710_109497897_109498250_109498370_109498934_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.12	chr7	-	4719	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	15859	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	46.8294117158532	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	1618	False	NA	NA	False	AATAAA	-15	NA	109543671	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534007_109534688_109534761_109543556
ES.31660.13	chr7	-	5007	24	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	45.8014949277657	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559615	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109543656_109543722_109559280
ES.31660.14	chr7	-	4687	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	5077	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	36.0173282446699	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	3014	False	NA	NA	False	AATAAA	-15	NA	109554453	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109554373
ES.31660.15	chr7	-	5091	24	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	53.5647939000763	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACTGGTCACTGGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	109559656	109492987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109512917_109513042_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520415_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.16	chr7	-	6132	22	NIC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	123	junction_11	17.7692439835248	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCACTGGTCACTGGCT	NA	False	NA	NA	False	AATAAA	-13	NA	109559617	109492988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.17	chr7	-	3933	19	NIC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-30	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	39.4732289339134	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCACTGGTCACTGGC	NA	False	NA	NA	False	AATAAA	-12	NA	109559637	109492989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109559280
ES.31660.18	chr7	-	4972	24	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	148	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	45.7886159814551	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCACTGGTCACTGGC	NA	False	NA	NA	False	AATAAA	-12	NA	109559382	109492989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109519323_109519590_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.2	chr7	-	4667	10	NIC	ENSMUSG00000035901.15	novel	4862	22	NA	NA	5801	0	intron_retention	FALSE	canonical	3	123	junction_9	16.6799946709291	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	4940	False	NA	NA	False	AATAAA	-15	NA	109514056	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927
ES.31660.21	chr7	-	4760	4	NIC	ENSMUSG00000035901.15	novel	4862	22	NA	NA	212	-5	intron_retention	FALSE	canonical	3	163	junction_2	11.0252236056942	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCTCACTGGTCACTG	NA	False	NA	NA	False	AATAAA	-10	NA	109499459	109492991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109496278_109497110_109497194_109497714_109497897_109498250
ES.31660.22	chr7	-	4991	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.0448526832706	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	NA	False	NA	NA	False	AATAAA	-8	NA	109559664	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511114_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.23	chr7	-	7034	20	NNC	ENSMUSG00000035901.15	novel	4862	22	NA	NA	-5596	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	38.5069695457992	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	5009	False	NA	NA	False	AATAAA	-8	NA	109529853	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109526579
ES.31660.24	chr7	-	6176	21	NIC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	8	-7	intron_retention	FALSE	canonical	3	123	junction_10	15.193419628247	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	NA	False	NA	NA	False	AATAAA	-8	NA	109559669	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109497194_109497714_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.26	chr7	-	4846	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.6655278294729	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	NA	False	NA	NA	False	AATAAA	-8	NA	109559660	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495617_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507584_109511214_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.29	chr7	-	7473	19	NIC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	23	-7	intron_retention	FALSE	canonical	0	0	junction_7	38.0212740968871	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	NA	False	NA	NA	False	AATAAA	-8	NA	109559654	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109497194_109497714_109497897_109498250_109500389_109504376_109504506_109504902_109504988_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.3	chr7	-	4857	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.9182094291328	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559641	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526111_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.30	chr7	-	4103	10	NIC	ENSMUSG00000035901.15	novel	4862	22	NA	NA	8657	-7	intron_retention	FALSE	canonical	3	140	junction_9	15.6568132922743	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCTCACTGGTCAC	7796	False	NA	NA	False	AATAAA	-8	NA	109511200	109492993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121
ES.31660.31	chr7	-	4873	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-8	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.9182094291328	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAACAAATCTCACTGGT	NA	False	NA	NA	False	AATAAA	-5	NA	109559615	109492996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526163_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.32	chr7	-	4320	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	-1	685	-1	-685	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGACCTGCTTTTTAC	NA	False	NA	NA	False	AAGAAA	-44	NA	109559678	109493671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.33	chr7	-	4207	21	ISM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	21	2738	21	-138	5prime_fragment	FALSE	canonical	3	123	junction_10	17.4324410224157	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCTCCTGAAGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	109559656	109495724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.34	chr7	-	1474	4	ISM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	62	39534	-8	745	5prime_fragment	FALSE	canonical	3	136	junction_3	8.33999733546454	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGAGAAGATGAATTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	109559615	109532520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.4	chr7	-	4758	22	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.4882489343213	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559614	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526111_109532819_109533478_109533899_109534010_109559280
ES.31660.5	chr7	-	4931	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	35.9686502617612	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559615	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518689_109520415_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31660.6	chr7	-	5865	23	NNC	ENSMUSG00000035901.15	novel	5004	23	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	35.9686502617612	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559633	109492986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109519590_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ES.31661.1	chr7	+	3759	1	Antisense	novelGene_ENSMUSG00000047554.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGCTGGAGAGATGGC	NA	False	NA	NA	False	AATACA	-32	NA	109575795	109579554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_109575800_109579600
ES.31661.2	chr7	+	203	1	Intergenic	novelGene_25955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAATGCTGCTGGGCGTG	NA	False	NA	NA	False	AAGAAA	-6	NA	109576455	109576658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109576500_109576700
ES.31662.1	chr7	+	225	1	Intergenic	novelGene_25956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCAGCACTTGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	109584074	109584299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109584100_109584300
ES.31662.2	chr7	+	376	1	Intergenic	novelGene_25957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTAGTGTACGCCT	NA	False	NA	NA	False	NA	NA	NA	109584074	109584450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109584100_109584400
ES.31663.1	chr7	-	5385	1	Genic_Genomic	ENSMUSG00000047554.15	novel	NA	NA	NA	NA	3591	2233	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAAGCCAAGAACTAA	NA	False	NA	NA	False	AAAACA	-30	NA	109574545	109569160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109569200_109574500
ES.31663.10	chr7	-	2237	7	NNC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	0	0	junction_1	144.950278831513	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTGTATCTGTCTTCT	NA	False	NA	-8	True	AATACA	-18	NA	109585488	109572694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574027_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.11	chr7	-	2509	8	NNC	ENSMUSG00000047554.15	novel	2774	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	1	2	junction_6	177.279785787832	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTGTATCTGTCTTCT	NA	False	NA	-8	True	AATACA	-18	NA	109585506	109572694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109582721_109582844_109585168
ES.31663.12	chr7	-	2137	7	NIC	ENSMUSG00000047554.15	novel	2346	8	NA	NA	-12	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	147.049594808464	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATATTGTATCTGTCTT	NA	False	NA	-10	True	AATACA	-16	NA	109585506	109572696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585416
ES.31663.13	chr7	-	5115	2	ISM	ENSMUSG00000047554.15	ENSMUST00000125703.2	839	3	-1318	-982	-1318	-5	intron_retention	FALSE	canonical	3	393	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATATTGTATCTGTCTT	NA	False	NA	-10	True	AATACA	-16	NA	109579454	109572696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109574159_109575801
ES.31663.14	chr7	-	2314	7	NNC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	-14	-6	intron_retention	FALSE	canonical	0	0	junction_6	147.41965796852	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATATTGTATCTGTCT	NA	False	NA	-11	True	AATACA	-15	NA	109585508	109572697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581909_109585168
ES.31663.16	chr7	-	4559	5	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	1	-7	intron_retention	FALSE	canonical	3	346	junction_4	27.362154520432	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAATATTGTATCTGTC	NA	False	NA	-12	True	AATACA	-14	NA	109585465	109572698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.17	chr7	-	4379	5	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	34	-7	intron_retention	FALSE	canonical	3	346	junction_4	27.3072792493137	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAATATTGTATCTGTC	NA	False	NA	-12	True	AATACA	-14	NA	109585422	109572698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109574159_109575801_109575941_109577916_109580325_109581862_109581981_109585168
ES.31663.18	chr7	-	2062	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	133	1645	-31	-347	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGCGATTGCTCTGTT	NA	False	NA	0	True	ATTAAA	-32	NA	109585525	109573038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.19	chr7	-	2583	6	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	1	-356	intron_retention	FALSE	canonical	3	346	junction_5	24.5324275195098	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATGATACATCTGCGAT	NA	False	NA	-9	True	ATTAAA	-23	NA	109585481	109573047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109574159_109575801_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.2	chr7	-	4638	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	176	-974	0	974	multi-exon	TRUE	canonical	3	346	junction_6	24.644133852366	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTGTGTTGTGGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	109585482	109570419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.21	chr7	-	1614	8	NNC	ENSMUSG00000047554.15	novel	2774	9	NA	NA	28	167	intron_retention	FALSE	canonical	1	2	junction_6	177.279785787832	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTTGAAGCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	109585428	109573511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109582721_109582844_109585168
ES.31663.22	chr7	-	1605	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	117	2118	-47	167	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTTGAAGCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	109585541	109573511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.23	chr7	-	1433	7	NNC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	19	167	intron_retention	FALSE	canonical	0	0	junction_5	143.733163265206	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTTGAAGCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	109585437	109573511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581930_109581981_109585168
ES.31663.24	chr7	-	3746	5	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	1	167	intron_retention	FALSE	canonical	3	346	junction_4	27.362154520432	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTTGAAGCAAAAATG	NA	False	NA	NA	False	NA	NA	NA	109585465	109573511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.25	chr7	-	960	3	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	26	166	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	196	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATACTTGAAGCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	109585343	109573512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109574159_109575801_109575941_109585168
ES.31663.3	chr7	-	3643	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	195	2	3	-2	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGATAATTTTCCCACC	NA	False	NA	NA	False	AATAAA	-23	NA	109585463	109571395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.4	chr7	-	3439	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	134	267	-30	-267	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTTTTTATGAAGCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	109585524	109571660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.5	chr7	-	2486	2	NNC	ENSMUSG00000047554.15	novel	839	3	NA	NA	2193	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGTGATTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-12	NA	109575943	109571682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109574027_109575801
ES.31663.6	chr7	-	3264	6	NIC	ENSMUSG00000047554.15	novel	3840	7	NA	NA	-4	139	intron_retention	FALSE	canonical	3	346	junction_5	24.5324275195098	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGCAGGCCTCTAAAG	NA	False	NA	NA	False	NA	NA	NA	109585486	109572371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109574159_109575801_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.7	chr7	-	2705	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	154	981	-10	136	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCAGCAGGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	109585504	109572374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.8	chr7	-	2534	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	193	1113	1	4	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCTTGTAATTCCATG	NA	False	NA	NA	False	NA	NA	NA	109585465	109572506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31663.9	chr7	-	2437	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	103	1300	-61	-2	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTATCTGTCTTCTG	NA	False	NA	-7	True	AATACA	-19	NA	109585555	109572693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ES.31664.1	chr7	-	173	1	Genic_Genomic	ENSMUSG00000047554.15	novel	NA	NA	NA	NA	-133	-1486	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAACAAGA	NA	False	NA	NA	False	NA	NA	NA	109586269	109586096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109586100_109586300
ES.31665.1	chr7	+	156	1	Intergenic	novelGene_25958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAACATAAAA	NA	False	NA	NA	False	NA	NA	NA	109587097	109587253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109587100_109587300
ES.31666.1	chr7	-	198	1	Intergenic	novelGene_25959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATTCTGATG	9614	False	NA	NA	False	NA	NA	NA	109599613	109599415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109599400_109599600
ES.31667.1	chr7	+	4273	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-15149	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.951807484593	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATCTGATTGCAATT	NA	False	NA	27	True	ATTAAA	-22	NA	109602331	109655328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109602565_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.10	chr7	+	4703	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	195.478821753798	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7176	False	NA	NA	False	AAGAAA	-2	NA	109617458	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.100	chr7	+	4488	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	280.022168641262	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7240	False	NA	NA	False	AATGAA	-32	NA	109617522	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650589_109651957_109652085_109653206_109653324_109654223
ES.31667.101	chr7	+	4315	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	195.568880820947	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7240	False	NA	21	True	ATTAAA	-16	NA	109617522	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.102	chr7	+	4158	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	244.283046069968	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTGATCTGATTGCA	7240	False	NA	24	True	ATTAAA	-19	NA	109617522	109655325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646283_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.103	chr7	+	4101	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	247.799327311954	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7241	False	NA	21	True	ATTAAA	-16	NA	109617523	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.104	chr7	+	4719	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	278.64294157378	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7241	False	NA	21	True	ATTAAA	-16	NA	109617523	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.105	chr7	+	5146	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	195.60468989008	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7241	False	NA	NA	False	AAGAAA	-2	NA	109617523	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.106	chr7	+	4325	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	240.88609211617	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCTTGATCTGAT	7242	False	NA	20	True	ATTAAA	-15	NA	109617524	109655321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652226_109653206_109653324_109654223
ES.31667.107	chr7	+	4752	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_2	193.175659798931	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7242	False	NA	23	True	ATTAAA	-18	NA	109617524	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.108	chr7	+	5902	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	195.54466611525	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7242	False	NA	NA	False	AAGAAA	-2	NA	109617524	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109652125_109653206_109653324_109654223
ES.31667.109	chr7	+	6015	22	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	7	-7	intron_retention	FALSE	canonical	0	0	junction_2	190.597711235851	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7246	False	NA	NA	False	AATGAA	-32	NA	109617528	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650735_109651917_109653324_109654223
ES.31667.11	chr7	+	6634	23	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_2	241.33713259722	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7177	False	NA	NA	False	AAGAAA	-2	NA	109617459	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
ES.31667.111	chr7	+	5973	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_2	194.838598319443	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7257	False	NA	21	True	ATTAAA	-16	NA	109617539	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.113	chr7	+	4624	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	56	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	244.101797412473	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7295	False	NA	NA	False	AATGAA	-32	NA	109617577	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650563_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.114	chr7	+	4164	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	177	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.951807484593	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7416	False	NA	26	True	ATTAAA	-21	NA	109617698	109655327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617824_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.115	chr7	+	4632	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	605	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	272.920467530785	971	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7844	False	NA	NA	False	AAGAAA	-2	NA	109618126	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109618234_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
ES.31667.116	chr7	+	2871	3	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-3700	2	intron_retention	TRUE	non_canonical	0	0	junction_1	457.5	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	NA	False	NA	23	True	ATTAAA	-18	NA	109625572	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109625622_109651602_109653324_109654223
ES.31667.117	chr7	+	2260	4	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-3686	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	433.472029086076	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109625586	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109625622_109651602_109652125_109653206_109653324_109654223
ES.31667.118	chr7	+	3954	23	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	11415	494	-377	0	3prime_fragment	FALSE	canonical	3	611	junction_6	112.715111147493	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	NA	False	NA	21	True	ATTAAA	-16	NA	109628895	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.119	chr7	+	4289	22	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	13330	7	1538	-7	3prime_fragment	FALSE	canonical	3	611	junction_5	114.859808071423	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109630810	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.120	chr7	+	3713	22	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	3047	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	201.747580327003	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	NA	False	NA	21	True	ATTAAA	-16	NA	109632319	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109632394_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.121	chr7	+	3492	21	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	6784	-7	intron_retention	FALSE	canonical	3	46	junction_20	198.516346933949	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109636056	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.122	chr7	+	4667	20	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	19704	495	7912	-1	3prime_fragment	FALSE	canonical	3	611	junction_3	106.401580810118	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCTTGATCTGAT	NA	False	NA	20	True	ATTAAA	-15	NA	109637184	109655321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.123	chr7	+	4146	18	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	9146	-7	intron_retention	FALSE	canonical	3	611	junction_3	93.2266279141809	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109638418	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.124	chr7	+	5024	17	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	10569	-3	intron_retention	FALSE	canonical	3	611	junction_2	109.029740782045	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	NA	False	NA	NA	False	AATGAA	-36	NA	109639841	109655813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650735_109651917_109653324_109654223
ES.31667.125	chr7	+	5136	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	10767	0	intron_retention	FALSE	canonical	3	11	junction_2	221.109274397276	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	NA	False	NA	NA	False	AAGAAA	-2	NA	109640039	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109652125_109653206_109653324_109654223
ES.31667.126	chr7	+	3465	15	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	26134	7	14342	-7	3prime_fragment	FALSE	canonical	3	670	junction_1	99.143191642087	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109643614	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.128	chr7	+	2810	14	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	14626	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.270742529506	964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	NA	False	NA	21	True	ATTAAA	-16	NA	109643898	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648818_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.129	chr7	+	2528	11	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	28711	495	16919	-1	3prime_fragment	FALSE	canonical	3	710	junction_1	91.4234105686284	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCTTGATCTGAT	NA	False	NA	20	True	ATTAAA	-15	NA	109646191	109655321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.13	chr7	+	1098	9	ISM	ENSMUSG00000066232.5	ENSMUST00000208821.2	3867	17	-51	7358	-10	-7358	5prime_fragment	FALSE	canonical	0	0	junction_2	272.620128337949	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATATATGGCGCCT	7188	False	NA	NA	False	NA	NA	NA	109617470	109641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187
ES.31667.130	chr7	+	3578	7	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	18084	-11	intron_retention	FALSE	canonical	3	782	junction_4	57.6907464176208	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGAAAACCCTTTGTG	NA	False	NA	NA	False	AATGAA	-28	NA	109647356	109655805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109647465_109648000_109648068_109648151_109648901_109649986_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.131	chr7	+	4814	6	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	18109	4	intron_retention	FALSE	canonical	3	794	junction_1	47.5419814479792	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	NA	False	NA	25	True	ATTAAA	-20	NA	109647381	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109653324_109654223
ES.31667.132	chr7	+	2171	8	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	30668	496	18876	-2	3prime_fragment	FALSE	canonical	3	777	junction_4	86.0924989029064	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTCTTGATCTGA	NA	False	NA	19	True	ATTAAA	-14	NA	109648148	109655320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.133	chr7	+	4618	3	NIC	ENSMUSG00000066232.5	novel	1883	8	NA	NA	19938	-6	intron_retention	FALSE	canonical	3	915	junction_2	4.5	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAACCCTTTGTGTTGTG	NA	False	NA	NA	False	AATGAA	-33	NA	109649210	109655810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109652125_109653206_109653324_109654223
ES.31667.134	chr7	+	2435	6	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	32504	7	20712	-7	3prime_fragment	FALSE	canonical	3	777	junction_2	98.6764409573025	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	NA	False	NA	NA	False	AATGAA	-32	NA	109649984	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.136	chr7	+	2591	5	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	32736	-244	20944	244	3prime_fragment	FALSE	canonical	3	777	junction_1	70.0945789629983	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGGAGTTAGGAA	NA	False	NA	-17	True	TATAAA	-9	NA	109650216	109656060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.137	chr7	+	5698	1	Genic_Genomic	ENSMUSG00000066232.5	novel	NA	NA	NA	NA	22113	1267	mono-exon	FALSE	NA	NA	NA	NA	NA	968	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109651385	109657083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_109651400_109657100
ES.31667.138	chr7	+	4708	2	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	35505	-2777	23713	2777	3prime_fragment	FALSE	canonical	3	915	junction_1	0	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGTGTCATGCCC	NA	False	NA	NA	False	NA	NA	NA	109652985	109658593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109653324_109654223
ES.31667.139	chr7	+	1604	2	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	26207	16565	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	109655479	109672381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109657070_109672367
ES.31667.14	chr7	+	4276	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	241.195978407601	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7188	False	NA	25	True	ATTAAA	-20	NA	109617470	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653317_109654223
ES.31667.140	chr7	+	3095	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	-85	-7	-85	0	multi-exon	TRUE	canonical	3	81	junction_4	55.3423285861133	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660831	109694601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.143	chr7	+	2447	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	-22	578	-22	1	multi-exon	FALSE	canonical	3	81	junction_4	55.3423285861133	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATGTCTGGATTGTTT	NA	False	NA	14	True	AATAAA	-27	NA	109660894	109694016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.144	chr7	+	5626	15	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_3	84.709949298793	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660894	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670403_109670477_109670578_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.146	chr7	+	2942	15	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	89.2875428384187	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660895	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668694_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676405_109681014_109681125_109682404_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.147	chr7	+	3743	16	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	82.3095512211203	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660912	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670403_109670477_109670578_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.148	chr7	+	3259	17	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-3	58948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	71.3459605986912	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAGACGC	NA	False	NA	NA	False	NA	NA	NA	109660913	109753549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497_109694793_109753494
ES.31667.149	chr7	+	5388	15	NIC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	74	junction_4	54.1699894323604	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660915	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.15	chr7	+	3892	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-9	4	intron_retention	FALSE	canonical	0	0	junction_2	238.603834693736	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7189	False	NA	25	True	ATTAAA	-20	NA	109617471	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.150	chr7	+	2598	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	-1	34	-1	-34	multi-exon	FALSE	canonical	3	74	junction_4	56.3191698171137	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAACATTAAATCCA	NA	False	NA	NA	False	TATAAA	-22	NA	109660915	109694191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.151	chr7	+	5493	15	NNC	ENSMUSG00000061079.15	novel	2914	15	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_4	83.0786755222459	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660915	109694601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668694_109668810_109669684_109669778_109670578_109672457_109672498_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.152	chr7	+	3675	15	NIC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	0	2	intron_retention	FALSE	canonical	3	139	junction_6	47.8948678602096	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTTGTTTCATTAA	NA	False	NA	21	True	AATACA	-19	NA	109660916	109694603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.154	chr7	+	4450	16	NNC	ENSMUSG00000061079.15	novel	2631	16	NA	NA	2	3	intron_retention	FALSE	canonical	0	0	junction_3	86.4214479551614	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATACTTTTTGTTTGTTT	NA	False	NA	15	True	AATACA	-13	NA	109660918	109694597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670403_109670477_109670578_109670663_109671328_109671410_109673274_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.155	chr7	+	2997	16	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.2581302972539	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660918	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668688_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687940_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.157	chr7	+	9526	11	NIC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	4	0	intron_retention	FALSE	canonical	1	2	junction_1	78.8206191297683	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660920	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109660983_109669684_109669778_109670578_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.158	chr7	+	5527	14	NIC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	4	0	intron_retention	FALSE	canonical	3	139	junction_5	47.0449866535295	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660920	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.160	chr7	+	3072	17	NNC	ENSMUSG00000061079.15	novel	2631	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.0324119196601	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660920	109694601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668694_109668810_109669684_109669778_109670403_109670477_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.161	chr7	+	4237	16	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.0773106602407	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGTTAATGTCTGGAT	NA	False	NA	9	True	AATAAA	-22	NA	109660920	109694011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109672457_109672500_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.163	chr7	+	4376	15	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	88.0353882926448	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660921	109694601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660981_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685322_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.164	chr7	+	2592	11	Fusion	ENSMUSG00000031016.10_ENSMUSG00000061079.15	novel	2914	15	NA	NA	-1	-2	multi-exon	TRUE	canonical	0	0	junction_1	121.149865868683	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109660927	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_109660983_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.165	chr7	+	5619	14	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_7	71.519600491319	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660937	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109673472_109674847_109674923_109676263_109676384_109679474_109679660_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ES.31667.166	chr7	+	2645	12	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	10400	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	76.3200091827359	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109671328	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690964_109691134_109692276_109692424_109693497
ES.31667.168	chr7	+	4680	9	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	-14512	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.6422069828729	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109676323	109694594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109690302_109690734_109691134_109692276_109692424_109693497
ES.31667.169	chr7	+	5116	8	NIC	ENSMUSG00000061079.15	novel	2914	15	NA	NA	-14508	0	intron_retention	FALSE	canonical	3	221	junction_6	17.3863657584245	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109676327	109694601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109691134_109692276_109692424_109693497
ES.31667.170	chr7	+	171	1	Intergenic	novelGene_25962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACATATAGATA	NA	False	NA	2	True	NA	NA	NA	109694679	109694850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109694700_109694800
ES.31667.171	chr7	+	178	1	Intergenic	novelGene_25963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTCTTTTGCATG	1479	False	NA	NA	False	NA	NA	NA	109705194	109705372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109705200_109705400
ES.31667.172	chr7	+	3580	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-65	-96	-65	96	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTCCTCGTTGTTGCTG	NA	False	NA	122	True	GATAAA	-27	NA	109721187	109742589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.173	chr7	+	3935	10	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	-36	-3	intron_retention	FALSE	canonical	2	31	junction_7	114.807837302916	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCTAAATCTTCACG	NA	False	NA	23	True	ATTAAA	-20	NA	109721216	109742490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738404_109738527_109738768_109738915_109741162
ES.31667.174	chr7	+	7383	10	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	-32	-5	intron_retention	FALSE	canonical	0	0	junction_7	125.249775140874	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTGTCTAAATCTTCA	NA	False	NA	21	True	ATTAAA	-18	NA	109721220	109742488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109737338_109738355_109738527_109738768_109738915_109741162
ES.31667.175	chr7	+	3300	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	-30	-2	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	119.043409449383	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109721222	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.176	chr7	+	3297	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-18	140	-18	-140	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGCCCTCCAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	109721234	109742353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.177	chr7	+	2436	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-14	997	-14	-997	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTCTGTCAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	109721238	109741496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.178	chr7	+	3100	8	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	-14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	142.264771838015	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTCTAAATCTTCAC	NA	False	NA	22	True	ATTAAA	-19	NA	109721238	109742489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109738355_109738527_109738768_109738915_109741162
ES.31667.179	chr7	+	5647	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-10	-2218	-10	2218	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGATGCATGCCTTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	109721242	109744711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.180	chr7	+	2921	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-9	507	-9	-507	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCGCATCTTTTTCT	NA	False	NA	NA	False	AATATA	-20	NA	109721243	109741986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.181	chr7	+	2212	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	-7	1214	-7	-1214	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATGAACCGCTCTG	NA	False	NA	NA	False	AATAGA	-18	NA	109721245	109741279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.183	chr7	+	3272	11	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	117.774402991482	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAATTGTCTAAATCT	NA	False	NA	18	True	ATTAAA	-15	NA	109721253	109742485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725238_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.184	chr7	+	2980	10	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	12	2675	12	-2675	5prime_fragment	FALSE	canonical	3	352	junction_6	28.0361318900811	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATTTTTTATTGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	109721264	109739818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768
ES.31667.185	chr7	+	3508	12	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.474047674548	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCTAAATCTTCACG	NA	False	NA	23	True	ATTAAA	-20	NA	109721266	109742490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109726214_109726321_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.186	chr7	+	3356	11	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_8	111.514842061494	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	26	True	ATTAAA	-23	NA	109721266	109742493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738404_109738527_109738768_109738915_109741162
ES.31667.187	chr7	+	3398	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	16	5	16	-5	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTGTCTAAATCTTCA	NA	False	NA	21	True	ATTAAA	-18	NA	109721268	109742488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.189	chr7	+	3194	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	126.724937863639	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109721269	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109722133_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.19	chr7	+	4498	23	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_2	190.268231715124	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7193	False	NA	21	True	ATTAAA	-16	NA	109617475	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626359_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.192	chr7	+	3636	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	28	-245	28	245	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAGGAAAGTTTTGTTA	NA	False	NA	NA	False	ACTAAA	-16	NA	109721280	109742738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.193	chr7	+	3296	12	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.831092318061	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	26	True	ATTAAA	-23	NA	109721281	109742493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109721964_109722057_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.195	chr7	+	1362	4	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	30	17046	30	-17046	5prime_fragment	FALSE	canonical	3	361	junction_3	23.0988215187606	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATACCTAATGCTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	109721282	109725447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202
ES.31667.196	chr7	+	7387	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	36	-2	intron_retention	FALSE	canonical	3	352	junction_5	27.6557318864072	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109721288	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.197	chr7	+	3038	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	36	345	36	-345	multi-exon	FALSE	canonical	3	352	junction_6	26.6084573021436	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCTTGTACTTGGTTG	NA	False	NA	NA	False	TTTAAA	-20	NA	109721288	109742148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.198	chr7	+	2998	9	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	43	-4471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	131.764882935477	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGAAGATCTTGAGCT	NA	False	NA	NA	False	NA	NA	NA	109721295	109738022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109736752
ES.31667.199	chr7	+	3306	11	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	56	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	120.417440597282	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTCACGGTGCCTGTT	NA	False	NA	32	True	ATTAAA	-29	NA	109721308	109742499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725313_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.2	chr7	+	3502	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-44	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7154	False	NA	26	True	ATTAAA	-21	NA	109617436	109655327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.20	chr7	+	4752	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.063720497779	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7193	False	NA	NA	False	AATGAA	-32	NA	109617475	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648009_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.200	chr7	+	3272	12	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.831092318061	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109721309	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109721763_109721850_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.203	chr7	+	3070	8	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	2260	-4	intron_retention	FALSE	canonical	3	29	junction_3	129.392773352759	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTCTAAATCTTCAC	NA	False	NA	22	True	ATTAAA	-19	NA	109723512	109742489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109723869_109725013_109725075_109725202_109726030_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.204	chr7	+	6707	9	NNC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	4066	4608	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	134.350055824328	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTTTTGAGTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	109725318	109747101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162_109745276_109745332
ES.31667.205	chr7	+	2251	7	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	4293	210	4293	-210	3prime_fragment	FALSE	canonical	3	352	junction_2	26.8250504814685	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCAAGTTTTCCACAAA	NA	False	NA	NA	False	TTTAAA	-22	NA	109725545	109742283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ES.31667.206	chr7	+	5299	5	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	8884	-2	intron_retention	FALSE	canonical	3	352	junction_1	24.4374200765956	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTAAATCTTCACGG	NA	False	NA	24	True	ATTAAA	-21	NA	109730136	109742491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109730183_109733961_109734058_109734844_109738527_109738768_109738915_109741162
ES.31667.207	chr7	+	2178	3	ISM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	16406	167	16406	-167	3prime_fragment	FALSE	canonical	3	399	junction_2	6	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGACTAACAATATTTGG	NA	False	NA	NA	False	AATACA	-19	NA	109737658	109742326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109738527_109738768_109738915_109741162
ES.31667.208	chr7	+	3760	1	Genic_Genomic	ENSMUSG00000031016.10	novel	NA	NA	NA	NA	20174	2693	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTATATTTATTTATT	NA	False	NA	NA	False	TTTAAA	-4	NA	109741426	109745186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_109741400_109745200
ES.31667.21	chr7	+	4205	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	269.906693625573	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTCTTGATCTGATTG	7196	False	NA	22	True	ATTAAA	-17	NA	109617478	109655323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645948_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
ES.31667.23	chr7	+	6146	22	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	318.963571018993	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7198	False	NA	21	True	ATTAAA	-16	NA	109617480	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109632316_109632394_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109648068_109648151_109648278_109648802_109648901_109649986_109650735_109651917_109653324_109654223
ES.31667.25	chr7	+	4248	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	1	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	274.923461571075	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTGATCTGATTGCA	7199	False	NA	24	True	ATTAAA	-19	NA	109617481	109655325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650058_109650212_109650436_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.28	chr7	+	5744	24	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_2	246.603874056011	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTCTTGATCTGA	7203	False	NA	19	True	ATTAAA	-14	NA	109617485	109655320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654691_109655160
ES.31667.3	chr7	+	7152	22	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_2	201.158763350152	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7162	False	NA	NA	False	AAGAAA	-2	NA	109617444	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109653324_109654223
ES.31667.30	chr7	+	4714	25	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	242.944895443848	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7204	False	NA	NA	False	AAGAAA	-2	NA	109617486	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.32	chr7	+	6176	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_2	195.603327235783	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	7209	False	NA	NA	False	AATGAA	-36	NA	109617491	109655813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.33	chr7	+	4646	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	20	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	248.310442016373	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7218	False	NA	NA	False	AATGAA	-32	NA	109617500	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.34	chr7	+	5017	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	21	-275	-20	275	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGAAGGGGTGCAT	7219	False	NA	14	True	AATAAA	-26	NA	109617501	109656091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.36	chr7	+	4766	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.928777031102	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTGTGTTGTGTTTTT	7219	False	NA	NA	False	AAGAAA	-1	NA	109617501	109655815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109647975_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.37	chr7	+	3811	18	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-18	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	212.389486834088	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7221	False	NA	NA	False	AATGAA	-32	NA	109617503	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626356_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.38	chr7	+	6221	24	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-18	118	intron_retention	FALSE	canonical	0	0	junction_2	245.325669896199	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCTCTAATTGTGTGGG	7221	False	NA	NA	False	ACTAAA	-18	NA	109617503	109655934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109645459_109645948_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.39	chr7	+	4130	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-17	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	249.151945349531	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7222	False	NA	23	True	ATTAAA	-18	NA	109617504	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.4	chr7	+	4802	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	-36	-3	-36	3	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTGTTTTTCTTG	7162	False	NA	NA	False	AAGAAA	-5	NA	109617444	109655819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.42	chr7	+	4853	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	28	-118	-13	118	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCTCTAATTGTGTGGG	7226	False	NA	NA	False	ACTAAA	-18	NA	109617508	109655934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.44	chr7	+	4616	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	242.413307638477	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7228	False	NA	NA	False	AAGAAA	-2	NA	109617510	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109654223
ES.31667.45	chr7	+	3625	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	35	1103	-6	-609	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTGTCCTATTTCTG	7233	False	NA	NA	False	TATAAA	-32	NA	109617515	109654713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.46	chr7	+	4027	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-6	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.289497377685	964	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGGCAACTCTCTCT	7233	False	NA	NA	False	AAAAAG	-25	NA	109617515	109655118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
ES.31667.47	chr7	+	4265	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.087889912727	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7233	False	NA	23	True	ATTAAA	-18	NA	109617515	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641158_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.49	chr7	+	3299	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	287.995748267936	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.5	chr7	+	4310	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	-36	489	-36	5	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGATCTGATTGCAAT	7162	False	NA	26	True	ATTAAA	-21	NA	109617444	109655327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.50	chr7	+	3400	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	271.155306051716	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7239	False	NA	25	True	ATTAAA	-20	NA	109617521	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648818_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.52	chr7	+	2638	8	FSM	ENSMUSG00000066232.5	ENSMUST00000208951.2	1883	8	0	-755	0	261	multi-exon	FALSE	canonical	0	0	junction_2	376.224422820383	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATATTCAACATTGT	7239	False	NA	0	True	AATAAA	-12	NA	109617521	109656077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626356_109642035_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.54	chr7	+	4413	23	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	251.920331267219	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7239	False	NA	NA	False	AATGAA	-32	NA	109617521	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646320_109648222_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.55	chr7	+	4277	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_2	247.953529398193	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7239	False	NA	25	True	ATTAAA	-20	NA	109617521	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.57	chr7	+	5413	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_2	195.54466611525	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109652125_109653206_109653324_109654223
ES.31667.58	chr7	+	4463	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	241.195978407601	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7239	False	NA	NA	False	AATGAA	-32	NA	109617521	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653299_109654450
ES.31667.60	chr7	+	4220	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	244.01083978085	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626356_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643830_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.61	chr7	+	4815	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	5	intron_retention	FALSE	canonical	0	0	junction_2	195.568880820947	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTTCTTGTG	7239	False	NA	NA	False	AAGAAA	-7	NA	109617521	109655821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.62	chr7	+	5092	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	300.304512120614	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636485_109636896_109638461_109639812_109639908_109640019_109640105_109641158_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.64	chr7	+	4672	23	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_2	244.314004192613	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109644159_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.65	chr7	+	3308	18	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	212.389486834088	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626356_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.66	chr7	+	4113	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	242.413307638477	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109654223
ES.31667.67	chr7	+	4796	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	278.198766352405	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTTGTGTTGTGTTT	7239	False	NA	NA	False	AATGAA	-36	NA	109617521	109655813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109632316_109632394_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.68	chr7	+	4733	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.487932481035	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTTTGTGTTGTGTT	7239	False	NA	NA	False	AATGAA	-35	NA	109617521	109655812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626356_109628897_109629052_109630814_109630974_109636131_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.7	chr7	+	4219	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	-36	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	248.310442016373	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7162	False	NA	25	True	ATTAAA	-20	NA	109617444	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.70	chr7	+	7024	21	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_2	255.21061890133	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7239	False	NA	25	True	ATTAAA	-20	NA	109617521	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109652125_109653206_109653324_109654223
ES.31667.71	chr7	+	2805	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	287.995748267936	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.72	chr7	+	6422	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	273	intron_retention	FALSE	canonical	0	0	junction_2	195.603327235783	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGTGTGAAGGGGTGC	7239	False	NA	12	True	AATAAA	-24	NA	109617521	109656089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.73	chr7	+	1671	6	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	417.767207904115	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTCTTGATCTGA	7239	False	NA	19	True	ATTAAA	-14	NA	109617521	109655320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630919_109653283_109653324_109654223
ES.31667.74	chr7	+	5764	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	-1042	0	1042	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGTTATTTC	7239	False	NA	NA	False	ATTAAA	-16	NA	109617521	109656858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.78	chr7	+	3906	23	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	247.517258768817	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109654223
ES.31667.80	chr7	+	4710	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	244.056257033542	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650723_109651917_109652125_109653206_109653324_109654223
ES.31667.81	chr7	+	4121	22	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.164077059321	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648244_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.82	chr7	+	4149	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	195.478821753798	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTGATCTGATTGCA	7239	False	NA	24	True	ATTAAA	-19	NA	109617521	109655325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.83	chr7	+	4710	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	269.611368325884	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653215_109653324_109654223
ES.31667.84	chr7	+	3815	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	41	907	0	-413	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCTAGCCTATGTA	7239	False	NA	NA	False	AATGAA	-21	NA	109617521	109654909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.85	chr7	+	4218	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	244.29461593535	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTGATCTGATTGC	7239	False	NA	23	True	ATTAAA	-18	NA	109617521	109655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646205_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.86	chr7	+	3568	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	269	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	287.995748267936	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACATTGTGTGAAGGG	7239	False	NA	8	True	AATAAA	-20	NA	109617521	109656085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.89	chr7	+	3906	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
ES.31667.90	chr7	+	3268	13	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	360.964410372485	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGAAGGGGTGCAT	7239	False	NA	14	True	AATAAA	-26	NA	109617521	109656091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639865_109642035_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.91	chr7	+	4563	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	247.664523995918	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.93	chr7	+	4155	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	273.118818262105	966	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAATTATGTCTTGATCTG	7239	False	NA	18	True	ATTAAA	-13	NA	109617521	109655319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650595_109650735_109651920_109652125_109653206_109653324_109654223
ES.31667.94	chr7	+	5213	24	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	4	intron_retention	FALSE	canonical	0	0	junction_2	195.33365376938	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGATCTGATTGCAA	7239	False	NA	25	True	ATTAAA	-20	NA	109617521	109655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.95	chr7	+	4650	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	240.283393881059	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCCTTTGTGTTGT	7240	False	NA	NA	False	AATGAA	-32	NA	109617522	109655809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645948_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ES.31667.98	chr7	+	1747	6	NIC	ENSMUSG00000066232.5	novel	1883	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	346.431869203744	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATGTCTTGATCTGAT	7240	False	NA	20	True	ATTAAA	-15	NA	109617522	109655321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109617716_109626277_109626356_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ES.31668.1	chr7	-	325	1	Intergenic	novelGene_25960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGTCCCAAACAGTTGT	6938	False	NA	NA	False	NA	NA	NA	109621085	109620760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109620800_109621100
ES.31669.1	chr7	-	173	1	Intergenic	novelGene_25961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAATCTTTAATTGA	3203	False	NA	NA	False	NA	NA	NA	109669035	109668862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109668900_109669000
ES.3167.1	chr10	+	2446	2	Antisense	novelGene_ENSMUSG00000112143.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	76804312	76807856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_76804690_76805787
ES.31670.1	chr7	-	334	1	Intergenic	novelGene_25964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	109707802	109707468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109707500_109707800
ES.31670.2	chr7	-	180	1	Intergenic	novelGene_25965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAAGGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	109707803	109707623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109707600_109707800
ES.31671.1	chr7	-	492	1	Intergenic	novelGene_25966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCAGAATTGCAGAAA	8136	False	NA	NA	False	AATAAA	-36	NA	109715738	109715246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109715200_109715700
ES.31671.2	chr7	-	281	1	Intergenic	novelGene_25967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAACTCCCAACTGGTA	8137	False	NA	NA	False	NA	NA	NA	109715737	109715456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109715500_109715700
ES.31671.3	chr7	-	160	1	Intergenic	novelGene_25968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8136	False	NA	NA	False	NA	NA	NA	109715738	109715578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109715600_109715700
ES.31672.1	chr7	-	5412	1	Antisense	novelGene_ENSMUSG00000031016.10_AS_novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGCACAGGA	9505	False	NA	NA	False	NA	NA	NA	109722206	109716794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_109716800_109722200
ES.31672.2	chr7	-	4061	1	Antisense	novelGene_ENSMUSG00000031016.10_AS_novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCAGGTCTCCCTT	9577	False	NA	NA	False	AATAAA	-17	NA	109722134	109718073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_109718100_109722100
ES.31672.3	chr7	-	3281	1	Antisense	novelGene_ENSMUSG00000031016.10_AS_novelGene_ENSMUSG00000109904.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTTATCTGTAATATG	9606	False	NA	NA	False	AATAAA	-21	NA	109722105	109718824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_109718800_109722100
ES.31673.1	chr7	-	164	1	Intergenic	novelGene_25969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGCCACTAAA	NA	False	NA	NA	False	NA	NA	NA	109760767	109760603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109760600_109760800
ES.31674.1	chr7	+	239	1	Intergenic	novelGene_25970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCCTCTACATTATAT	NA	False	NA	NA	False	NA	NA	NA	109766852	109767091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109766900_109767100
ES.31675.1	chr7	-	948	2	Intergenic	novelGene_25971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAACTACTTCTGTTGT	2998	False	NA	NA	False	AATAAA	-21	NA	109779006	109773152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109773942_109778847
ES.31675.2	chr7	-	169	1	Intergenic	novelGene_25972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGAAGAAGCA	8342	False	NA	NA	False	NA	NA	NA	109773662	109773493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109773500_109773700
ES.31676.1	chr7	+	3903	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-40092	-1	intron_retention	FALSE	canonical	0	0	junction_1	98.6529939897442	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAACTGGTTACATTA	NA	False	NA	76	True	ATTAAA	-19	NA	109780825	109882712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109780902_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.10	chr7	+	2891	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-8	-1003	intron_retention	FALSE	canonical	1	9	junction_1	99.8957456551579	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGCCTTCATACAGT	NA	False	NA	8	True	AATAAA	-20	NA	109820909	109881710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109821117_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.12	chr7	+	5762	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-5	-69	intron_retention	FALSE	canonical	3	251	junction_5	37.0811272752056	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109820912	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.13	chr7	+	4425	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	0	-398	0	398	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCGGTCCCTTGTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	109820917	109883111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.14	chr7	+	3958	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	1	68	1	-68	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820918	109882645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.15	chr7	+	3950	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	2	-67	intron_retention	FALSE	canonical	0	0	junction_5	99.2785546075218	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTCTATTTTTTTA	NA	False	NA	10	True	ATTAAA	-17	NA	109820919	109882646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865182_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.16	chr7	+	2559	9	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	5	7596	5	-7596	5prime_fragment	FALSE	canonical	3	251	junction_6	30.7995028368966	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGGCGTCTCCTCTAG	NA	False	NA	NA	False	AATAAA	-3	NA	109820922	109875117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841
ES.31676.17	chr7	+	4021	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	7	-68	intron_retention	FALSE	canonical	2	7	junction_2	120.550905568284	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820924	109882645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109824877_109824947_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.19	chr7	+	3778	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	22	227	1	-227	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTTGGGATCTACT	NA	False	NA	-94	True	AATGAA	-10	NA	109820939	109882486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.2	chr7	+	3996	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-40079	-69	intron_retention	FALSE	canonical	0	0	junction_1	98.6529939897442	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109780838	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109781076_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.20	chr7	+	3985	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	1	-69	intron_retention	FALSE	canonical	0	0	junction_11	99.2804692285846	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109820939	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880388
ES.31676.21	chr7	+	3562	7	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	1	369	intron_retention	FALSE	non_canonical	0	0	junction_3	127.77280183548	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAAGATTAAAACTTCG	NA	False	NA	NA	False	AATAAA	-31	NA	109820939	109883082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855111_109873874_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.22	chr7	+	8395	3	ISM	ENSMUSG00000031015.9	ENSMUST00000210513.2	1670	4	-20	1266	3	-1266	5prime_fragment	FALSE	canonical	3	329	junction_1	3	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109820941	109863020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109821117_109842590_109842732_109854941
ES.31676.23	chr7	+	4101	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	4	-71	intron_retention	FALSE	canonical	0	0	junction_3	123.497047872948	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTTGGTTTCTATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	109820942	109882642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109850856_109851027_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.24	chr7	+	4011	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-5	-70	intron_retention	FALSE	canonical	0	0	junction_9	140.282354160774	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGGTTTCTATTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	109820956	109882643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109824877_109824947_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873817_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.25	chr7	+	4774	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-1	-1009	intron_retention	FALSE	canonical	3	251	junction_5	37.0811272752056	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTATAGTTGCCTTCA	NA	False	NA	2	True	AATAAA	-14	NA	109820960	109881704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.26	chr7	+	2973	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-1	-1002	intron_retention	FALSE	canonical	0	0	junction_7	98.6168811928178	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGCCTTCATACAGTT	NA	False	NA	9	True	AATAAA	-21	NA	109820960	109881711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869280_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.28	chr7	+	3804	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-1	-71	intron_retention	FALSE	canonical	0	0	junction_5	103.171895397923	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTTGGTTTCTATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	109820960	109882642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.29	chr7	+	3151	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-1	-1003	intron_retention	FALSE	canonical	0	0	junction_3	123.497047872948	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGCCTTCATACAGT	NA	False	NA	8	True	AATAAA	-20	NA	109820960	109881710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109850856_109851027_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.3	chr7	+	4235	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-32195	-69	intron_retention	FALSE	canonical	0	0	junction_1	123.763972275187	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109788722	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109788903_109796346_109796643_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.30	chr7	+	3716	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-1	-320	intron_retention	FALSE	non_canonical	0	0	junction_7	129.088668354432	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTCTGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	109820960	109882393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872463_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880388
ES.31676.31	chr7	+	3951	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	4	-70	intron_retention	FALSE	canonical	0	0	junction_10	124.230989865553	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGGTTTCTATTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	109820965	109882643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878579_109879773_109879871_109880388
ES.31676.32	chr7	+	10944	3	NNC	ENSMUSG00000031015.9	novel	1670	4	NA	NA	21	8256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAAAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	109820982	109832168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109824248_109824313_109830287_109830462
ES.31676.33	chr7	+	4169	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	191	-30	intron_retention	FALSE	canonical	3	13	junction_1	95.1843795782821	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATTAAACATACCAGA	NA	False	NA	47	True	AGTAAA	-13	NA	109821152	109882683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821524_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.34	chr7	+	4064	11	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	192	7	intron_retention	FALSE	canonical	0	0	junction_1	102.403564391089	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGTTACATTAATAAAATG	NA	False	NA	84	True	ATTAAA	-27	NA	109821153	109882720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821524_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.35	chr7	+	3181	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	200	-1009	intron_retention	FALSE	canonical	3	13	junction_1	95.1843795782821	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTATAGTTGCCTTCA	NA	False	NA	2	True	AATAAA	-14	NA	109821161	109881704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821524_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.36	chr7	+	4516	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	225	351	intron_retention	FALSE	canonical	3	13	junction_1	95.1843795782821	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGGTTTTACATGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	109821186	109883064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109821524_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.37	chr7	+	2821	11	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	21671	1009	21627	-1009	3prime_fragment	FALSE	canonical	3	251	junction_5	37.834375903403	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTATAGTTGCCTTCA	NA	False	NA	2	True	AATAAA	-14	NA	109842588	109881704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.38	chr7	+	2687	10	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	34022	1002	33978	-1002	3prime_fragment	FALSE	canonical	3	251	junction_4	39.5024612454015	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGCCTTCATACAGTT	NA	False	NA	9	True	AATAAA	-21	NA	109854939	109881711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.39	chr7	+	3618	10	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	34022	71	33978	-71	3prime_fragment	FALSE	canonical	3	251	junction_4	39.5024612454015	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTTGGTTTCTATTTT	NA	False	NA	6	True	ATTAAA	-13	NA	109854939	109882642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.4	chr7	+	4549	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-32185	396	intron_retention	FALSE	canonical	0	0	junction_1	127.626197471333	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAAGCGGTCCCTTGTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	109788732	109883109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109788903_109796346_109796643_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.41	chr7	+	4687	5	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	48707	1002	48663	-1002	3prime_fragment	FALSE	canonical	3	295	junction_4	40.6655566788406	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGCCTTCATACAGTT	NA	False	NA	9	True	AATAAA	-21	NA	109869624	109881711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.42	chr7	+	4125	5	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	50202	69	50158	-69	3prime_fragment	FALSE	canonical	3	295	junction_4	40.6655566788406	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109871119	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.43	chr7	+	4307	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	53039	72	52995	-72	intron_retention	FALSE	canonical	3	303	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTTTGGTTTCTATTT	NA	False	NA	5	True	ATTAAA	-12	NA	109873956	109882641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109874009_109878386
ES.31676.44	chr7	+	2529	3	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	57443	69	57399	-69	3prime_fragment	FALSE	canonical	3	295	junction_2	50.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGTTTCTATTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	109878360	109882644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_109878586_109879773_109879871_109880437
ES.31676.5	chr7	+	172	1	Intergenic	novelGene_25976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	7078	False	NA	NA	False	NA	NA	NA	109805753	109805925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_109805800_109805900
ES.31676.6	chr7	+	3856	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-38	-68	intron_retention	FALSE	canonical	1	9	junction_1	99.8957456551579	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820879	109882645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_109821117_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.7	chr7	+	4103	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-37	-39	-37	39	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGTGTGTGTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	109820880	109882752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.8	chr7	+	3048	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	-24	1003	-24	-1003	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGCCTTCATACAGT	NA	False	NA	8	True	AATAAA	-20	NA	109820893	109881710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31676.9	chr7	+	3844	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	-13	-70	intron_retention	FALSE	canonical	1	5	junction_1	97.3165576697728	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGGTTTCTATTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	109820904	109882643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_109820991_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ES.31677.1	chr7	-	808	2	Intergenic	novelGene_25973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGGTTGGTAGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	109783586	109782136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109782193_109782834
ES.31678.1	chr7	-	2538	2	Intergenic	novelGene_25974	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAATGGCCAA	NA	False	NA	NA	False	NA	NA	NA	109797664	109795078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109796336_109796383
ES.31679.1	chr7	-	179	1	Intergenic	novelGene_25975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGAATGTCTCTCA	7172	False	NA	NA	False	NA	NA	NA	109801073	109800894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_109800900_109801100
ES.3168.1	chr10	-	170	1	Intergenic	novelGene_2485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76824167	76823997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76824000_76824200
ES.31680.1	chr7	+	176	1	Intergenic	novelGene_25979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	8647	False	NA	NA	False	NA	NA	NA	110142901	110143077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110142900_110143100
ES.31681.1	chr7	+	176	1	Intergenic	novelGene_25980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	110158839	110159015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110158800_110159000
ES.31682.1	chr7	+	180	1	Intergenic	novelGene_25981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATCTGTCCAGCTC	NA	False	NA	NA	False	AATAAA	-6	NA	110193475	110193655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110193500_110193700
ES.31683.1	chr7	+	183	1	Intergenic	novelGene_25982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATCTAG	NA	False	NA	NA	False	NA	NA	NA	110194880	110195063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110194900_110195100
ES.31684.1	chr7	+	4990	1	Intergenic	novelGene_25983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAACGATTCTAGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	110197613	110202603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110197600_110202600
ES.31685.1	chr7	+	326	1	Intergenic	novelGene_25984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110209717	110210043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110209700_110210000
ES.31686.1	chr7	-	7079	40	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_39	19.8558248483317	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214119	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
ES.31686.10	chr7	-	7139	41	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	27.4839839724884	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214102	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110088655_110088733_110159464_110159554_110213913
ES.31686.11	chr7	-	6435	36	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	22.9883022604177	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110062172	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027510_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062
ES.31686.12	chr7	-	7232	42	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	34.9270847517567	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214125	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916210_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
ES.31686.13	chr7	-	5341	26	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	19738	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	26.1411552919912	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110021762	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939294_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651
ES.31686.15	chr7	-	6964	39	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	22.291135835621	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214118	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.16	chr7	-	7140	41	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	30.1031455997542	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214117	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051136_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.17	chr7	-	6996	42	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	29.0677888290846	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAACCTCTGAGTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	110214107	109907225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908438_109908578_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.19	chr7	-	7377	42	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_35	32.7985758748305	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAACCTCTGAGTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	110214118	109907225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110055942_110056172_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.2	chr7	-	7157	41	FSM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	8	-11	2	2	multi-exon	FALSE	canonical	3	12	junction_13	24.8098266821838	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214119	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.20	chr7	-	6937	41	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	21.7648799675073	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGAACCTCTGAGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	110214125	109907227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908438_109908578_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.21	chr7	-	4590	22	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	-11018	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	27.3097625264611	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	109974811	109907228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961440_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778
ES.31686.22	chr7	-	7056	40	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	27.6864666204456	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	110214117	109907228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062170_110063794_110063915_110088427_110088566_110159464_110159545_110213913
ES.31686.26	chr7	-	6908	39	NNC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	28.0720777864151	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	110214115	109907228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916210_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110159464_110159554_110213913
ES.31686.27	chr7	-	4716	12	ISM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	273263	0	-1372	0	intron_retention	FALSE	canonical	3	92	junction_11	13.5530790012168	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	109940864	109907228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096
ES.31686.30	chr7	-	6881	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	7	202	-1	-193	multi-exon	FALSE	canonical	3	82	junction_32	14.3447273642903	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTGCACATTACTTG	NA	False	NA	NA	False	TATAAA	-17	NA	110214122	109907421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.32	chr7	-	6796	41	NIC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	3	-370	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	25.4321523863003	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTTCCTTTTTAAATA	NA	False	NA	NA	False	AATAAA	-38	NA	110214118	109907598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.33	chr7	-	6710	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	1	379	-1	-370	multi-exon	FALSE	canonical	3	82	junction_32	14.3447273642903	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTTCCTTTTTAAATA	NA	False	NA	NA	False	AATAAA	-38	NA	110214128	109907598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.34	chr7	-	7440	12	ISM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	270159	380	-4476	-380	intron_retention	FALSE	canonical	3	92	junction_11	13.5530790012168	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATAAAAGGTTGTTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	109943968	109907608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096
ES.31686.35	chr7	-	5462	31	NIC	ENSMUSG00000038371.16	novel	5481	40	NA	NA	1292	-385	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	32.4067208392882	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAGTAATAAAAGGTTG	NA	False	NA	NA	False	AATAAA	-23	NA	110040208	109907613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156
ES.31686.37	chr7	-	6690	40	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	2	-387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	22.3215106037753	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTTAGTAATAAAAGGT	NA	False	NA	NA	False	AATAAA	-21	NA	110214119	109907615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916096_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.39	chr7	-	6766	41	FSM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	-1	389	-1	-389	multi-exon	FALSE	canonical	3	12	junction_13	24.8098266821838	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATTTTAGTAATAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	110214128	109907617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.4	chr7	-	6842	38	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-1	2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_35	26.084959801206	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214113	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110088427_110088566_110159464_110159551_110213913
ES.31686.41	chr7	-	1880	1	Genic_Genomic	ENSMUSG00000038371.16	novel	NA	NA	NA	NA	-1623	-10658	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	7429	False	NA	NA	False	NA	NA	NA	109953071	109951191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_109951200_109953100
ES.31686.42	chr7	-	4767	26	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-1	16401	combination_of_known_junctions	FALSE	canonical	3	22	junction_25	20.550270071218	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCCCCTTTTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	110214104	109960061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
ES.31686.43	chr7	-	1810	1	Intergenic	novelGene_25977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCGCCAAAAAAAAAAAAAGA	8206	False	NA	NA	False	NA	NA	NA	110053339	110051529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110051500_110053300
ES.31686.44	chr7	-	9756	4	NIC	ENSMUSG00000038371.16	novel	1476	11	NA	NA	-1	7482	intron_retention	FALSE	canonical	3	105	junction_3	7.03957069398096	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	110214128	110054600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.45	chr7	-	1181	7	NNC	ENSMUSG00000038371.16	novel	404	4	NA	NA	-1	6337	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	43.2242216047129	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGATGATCTTTGT	NA	False	NA	NA	False	AATAAA	-9	NA	110214104	110055745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110056172_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.46	chr7	-	862	1	Intergenic	novelGene_25978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110131133	110130271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110130300_110131100
ES.31686.47	chr7	-	1712	3	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	4	-134994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTACCTGCTTTGTATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	110214117	110197076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110198489_110198802_110198899_110213913
ES.31686.5	chr7	-	6897	39	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-2	2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_10	26.1497525186512	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214114	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
ES.31686.6	chr7	-	7057	40	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	22.2773445207337	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAGTGCTGTGATGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	110214115	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916210_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.7	chr7	-	7181	41	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	25.4321523863003	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGAGTGCTGTGATG	NA	False	NA	NA	False	ATTAAA	-20	NA	110214124	109907219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.8	chr7	-	7069	39	NNC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	22.4635747014061	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214118	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051266_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31686.9	chr7	-	7248	42	NIC	ENSMUSG00000038371.16	novel	7154	41	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	28.9182111951439	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGAGTGCTGTGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	110214117	109907220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109947093_109947190_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ES.31687.1	chr7	-	156	1	Intergenic	novelGene_25985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	110220865	110220709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110220700_110220900
ES.31688.1	chr7	+	1393	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	-4	1	-4	-1	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTCGGTTCATGCA	5109	False	NA	NA	False	AATAAA	-15	NA	110226863	110229026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
ES.31689.1	chr7	+	3239	3	Intergenic	novelGene_25986	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACCTTAATGTTGTTG	3958	False	NA	NA	False	NA	NA	NA	110247530	110255767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110248642_110251970_110252056_110253724
ES.3169.1	chr10	-	217	1	Intergenic	novelGene_2486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTAGAGCATCATCA	NA	False	NA	NA	False	NA	NA	NA	76841891	76841674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_76841700_76841900
ES.31690.1	chr7	+	3816	15	Fusion	ENSMUSG00000005686.18_ENSMUSG00002076727.1	novel	667	3	NA	NA	-130	-9	multi-exon	FALSE	canonical	2	4	junction_1	16.4001306615004	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAGAACAAATGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	110367282	110411603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_110367307_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.10	chr7	+	4461	14	NIC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	21	-10	intron_retention	FALSE	canonical	3	40	junction_1	9.21151838764474	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAGAACAAATGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	110367433	110411602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.11	chr7	+	3945	15	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	26	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17.8125156641535	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAATAGAACAAATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110367438	110411601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110377005_110377232_110387809_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.12	chr7	+	3810	15	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-47	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.6866143320482	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCCAATAGAACAAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	110367502	110411599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110407048_110407161_110409002_110409114_110409940
ES.31690.13	chr7	+	3770	15	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.6888763348446	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAACAAATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	110367556	110411605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110399849_110400045_110401638_110401771_110402124_110402201_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.14	chr7	+	4193	15	FSM	ENSMUSG00000005686.18	ENSMUST00000213373.2	3337	15	-366	-490	202	4	multi-exon	FALSE	canonical	3	8	junction_1	15.4927567012485	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTATTTCTGAGAT	NA	False	NA	NA	False	AATAAA	-32	NA	110367751	110411616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.15	chr7	+	3771	13	NIC	ENSMUSG00000005686.18	novel	3337	15	NA	NA	269	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	25.1462389500564	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCCAATAGAACAAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	110367818	110411599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110405170_110405292_110409002_110409114_110409940
ES.31690.16	chr7	+	3997	16	NNC	ENSMUSG00000005686.18	novel	3337	15	NA	NA	-75	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.9500835001943	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAGAACAAATGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	110368042	110411603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110368140_110373017_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110407048_110407161_110409002_110409114_110409940
ES.31690.17	chr7	+	4089	15	Fusion	ENSMUSG00000005686.18_ENSMUSG00002076727.1	novel	667	3	NA	NA	688	-11	multi-exon	FALSE	canonical	0	0	junction_1	17.321244476194	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAATAGAACAAATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110368805	110411601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_110369105_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.18	chr7	+	3790	14	ISM	ENSMUSG00000005686.18	ENSMUST00000005829.13	4094	15	5193	13	107	-13	3prime_fragment	FALSE	canonical	3	45	junction_6	7.83105636469195	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCCAATAGAACAAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	110377003	110411599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.19	chr7	+	2074	4	ISM	ENSMUSG00000005686.18	ENSMUST00000005829.13	4094	15	33357	7	28271	-7	3prime_fragment	FALSE	canonical	3	63	junction_1	3.74165738677394	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAACAAATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	110405167	110411605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.2	chr7	+	3625	14	Fusion	ENSMUSG00000005686.18_ENSMUSG00002076727.1	novel	667	3	NA	NA	-125	-12	multi-exon	FALSE	canonical	0	0	junction_11	22.0502384964762	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAATAGAACAAATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	110367287	110411600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_110367307_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110407048_110407161_110409002_110409114_110409940
ES.31690.20	chr7	+	2424	2	ISM	ENSMUSG00000005686.18	ENSMUST00000005829.13	4094	15	36538	13	31452	-13	3prime_fragment	FALSE	canonical	3	66	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCCAATAGAACAAATGT	NA	False	NA	NA	False	AATAAA	-15	NA	110408348	110411599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_110409114_110409940
ES.31690.3	chr7	+	4091	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	-112	-490	-112	4	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTATTTCTGAGAT	NA	False	NA	NA	False	AATAAA	-32	NA	110367300	110411616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.4	chr7	+	3888	14	NIC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-92	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	17.4240532923914	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACAAATGTTTCTTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	110367320	110411607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110409002_110409114_110409940
ES.31690.5	chr7	+	3359	12	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-40	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.4460474217919	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAATAGAACAAATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110367372	110411601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367577_110392890_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.6	chr7	+	2900	15	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-21	-548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.6866143320482	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTGTGCATTTTAAAA	NA	False	NA	NA	False	CATAAA	-40	NA	110367391	110410578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110407048_110407161_110409002_110409114_110409940
ES.31690.7	chr7	+	4400	14	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-17	-12	intron_retention	FALSE	canonical	0	0	junction_11	17.9427096170664	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAATAGAACAAATGTT	NA	False	NA	NA	False	AATAAA	-16	NA	110367395	110411600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110403061_110404031_110404196_110405170_110405292_110407048_110407161_110409002_110409114_110409940
ES.31690.8	chr7	+	4157	16	NNC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5152658981168	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACAAATGTTTCTTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	110367395	110411607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110367587_110373017_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31690.9	chr7	+	3783	14	NIC	ENSMUSG00000005686.18	novel	3489	15	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	18.1473260781577	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAATGTTTCTTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	110367395	110411608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110367587_110377005_110377232_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ES.31691.1	chr7	+	205	1	Intergenic	novelGene_25987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACACAACGGTTGAGC	NA	False	NA	NA	False	NA	NA	NA	110435796	110436001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110435800_110436000
ES.31692.1	chr7	-	4156	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	56	-180	1	180	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTGCCAGTTCTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	110443608	110412557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.10	chr7	-	4081	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	45.3801718815608	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443608	110412738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416058_110420460_110420569_110424317_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.11	chr7	-	4000	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_2	45.3801718815608	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443653	110412738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416058_110420460_110420569_110424443_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.12	chr7	-	4158	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_2	45.3801718815608	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443622	110412738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416058_110420460_110420738_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.13	chr7	-	3717	4	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_3	56.5921078125446	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443653	110412738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110443545
ES.31692.14	chr7	-	3119	6	NIC	ENSMUSG00000030788.17	novel	859	7	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1	junction_1	44.445922197655	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTAGGTGTTGGGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	110443618	110412738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110415192_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.15	chr7	-	3811	5	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	12	-2	intron_retention	FALSE	canonical	2	4	junction_4	48.6640267548833	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTAGGTGTTGGGAGT	NA	False	NA	-2	True	ATTAAA	-20	NA	110443639	110412739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110443545
ES.31692.16	chr7	-	4308	6	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-12	-3	intron_retention	FALSE	canonical	0	0	junction_5	46.1839799064567	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCGTAGGTGTTGGGAG	NA	False	NA	-3	True	ATTAAA	-19	NA	110443621	110412740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443223
ES.31692.17	chr7	-	4006	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	3	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	45.3801718815608	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCCGTAGGTGTTGGGA	NA	False	NA	-4	True	ATTAAA	-18	NA	110443648	110412741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416058_110420460_110420569_110424429_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.18	chr7	-	4502	2	NNC	ENSMUSG00000030788.17	novel	614	2	NA	NA	-793	-13	intron_retention	FALSE	canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAACTTGCATCCGTAG	NA	False	NA	-13	True	ATTAAA	-9	NA	110421608	110412750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416105_110420460
ES.31692.2	chr7	-	4025	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	11	-4	-2	4	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTTGGGAGTTTCCTT	NA	False	NA	4	True	ATTAAA	-26	NA	110443653	110412733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.20	chr7	-	3841	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	11	180	-2	-180	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGGACTGTTTTGTAT	NA	False	NA	NA	False	ACTAAA	-12	NA	110443653	110412917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.21	chr7	-	2736	5	NIC	ENSMUSG00000030788.17	novel	859	7	NA	NA	0	-181	intron_retention	FALSE	canonical	1	1	junction_1	55.1475294097569	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGAGGACTGTTTTGTA	NA	False	NA	NA	False	ACTAAA	-11	NA	110443609	110412918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110415192_110420460_110420569_110424423_110424606_110432943_110433053_110443545
ES.31692.22	chr7	-	4798	2	FSM	ENSMUSG00000030788.17	ENSMUST00000176048.2	614	2	-3096	-1088	-3096	79	multi-exon	FALSE	canonical	3	122	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGACTTGATTCAGATT	NA	False	NA	NA	False	AATAAA	-19	NA	110423911	110414710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110416058_110420460
ES.31692.23	chr7	-	2012	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	40	1980	-15	72	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGATCTGACTTGAT	NA	False	NA	NA	False	AATAAA	-12	NA	110443624	110414717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.24	chr7	-	1882	6	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	17	70	intron_retention	FALSE	canonical	3	12	junction_4	41.252393869932	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGATCTGACTTG	NA	False	NA	NA	False	AATAAA	-10	NA	110443582	110414719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436369_110436478_110443545
ES.31692.25	chr7	-	1810	5	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-9	70	intron_retention	FALSE	canonical	2	4	junction_4	48.6640267548833	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGATCTGACTTG	NA	False	NA	NA	False	AATAAA	-10	NA	110443618	110414719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110443545
ES.31692.26	chr7	-	3669	4	ISM	ENSMUSG00000030788.17	ENSMUST00000177462.8	859	7	-42	6504	0	3210	5prime_fragment	FALSE	canonical	3	107	junction_1	2.05480466765633	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGGAAACATTACATTA	NA	False	NA	NA	False	AATAAA	-14	NA	110443599	110421293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.27	chr7	-	2823	4	ISM	ENSMUSG00000030788.17	ENSMUST00000177462.8	859	7	-44	7352	-2	2362	5prime_fragment	FALSE	canonical	3	107	junction_1	2.05480466765633	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGGTGTTGATATGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	110443601	110422141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.28	chr7	-	1121	4	FSM	ENSMUSG00000030788.17	ENSMUST00000176716.3	1080	4	-40	-1	2	1	multi-exon	FALSE	canonical	0	0	junction_1	52.332271751441	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTATGTACTGAAGTGA	NA	False	NA	NA	False	TTTAAA	-7	NA	110443649	110429454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110430169_110432943_110433053_110436283_110436478_110443545
ES.31692.3	chr7	-	4100	7	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	56.0911955856017	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443609	110412737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416105_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110436615_110436692_110443545
ES.31692.4	chr7	-	3090	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	53.5051399400095	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443608	110412737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110415192_110420460_110420569_110424443_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.5	chr7	-	3907	6	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	-16	0	intron_retention	FALSE	canonical	3	12	junction_4	41.252393869932	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443625	110412737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436369_110436478_110443545
ES.31692.6	chr7	-	3067	7	NNC	ENSMUSG00000030788.17	novel	859	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5473331599447	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443647	110412737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110414998_110415079_110415192_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31692.8	chr7	-	4023	6	NNC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	44.8446206361477	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443608	110412737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110416105_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ES.31693.1	chr7	+	2146	1	Intergenic	novelGene_25988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCCGGCAGTGGTG	4573	False	NA	NA	False	NA	NA	NA	110618914	110621060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110618900_110621100
ES.31694.1	chr7	+	4541	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	-237	-4	-237	4	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGTCCTCTTTTT	262	False	NA	35	True	AATAAA	-21	NA	110627920	110655588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.10	chr7	+	4671	24	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	0	-2	intron_retention	FALSE	canonical	3	158	junction_7	10.740626546023	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	543	False	NA	29	True	AATAAA	-15	NA	110628201	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.11	chr7	+	8827	22	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	0	-2	intron_retention	FALSE	canonical	3	158	junction_6	10.6664540795142	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	543	False	NA	29	True	AATAAA	-15	NA	110628201	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.12	chr7	+	4312	26	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.3497882467595	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	543	False	NA	29	True	AATAAA	-15	NA	110628201	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110629699_110629758_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.15	chr7	+	4080	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	45	175	1	1	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGACTGAGTTTTATCT	544	False	NA	NA	False	GATAAA	-20	NA	110628202	110655409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.16	chr7	+	4329	24	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	1	-2	intron_retention	FALSE	canonical	3	158	junction_8	10.6930007318004	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	544	False	NA	29	True	AATAAA	-15	NA	110628202	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.17	chr7	+	3071	23	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	45	2951	1	1056	5prime_fragment	FALSE	canonical	3	158	junction_8	9.42137976594802	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCCCAAACCAAAGAAGC	544	False	NA	NA	False	NA	NA	NA	110628202	110652633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588
ES.31694.18	chr7	+	4218	26	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	36.3121136812497	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCCTGTGTGTCCTCTTT	544	False	NA	33	True	AATAAA	-19	NA	110628202	110655586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650210_110650248_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.2	chr7	+	3345	16	FSM	ENSMUSG00000005609.17	ENSMUST00000152019.2	2987	16	-26	-332	18	0	multi-exon	FALSE	canonical	3	158	junction_8	8.40211613556701	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACAAAGCTCTTGGTGT	517	False	NA	NA	False	NA	NA	NA	110628175	110647186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969
ES.31694.20	chr7	+	3730	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	45	525	1	-349	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCAGGTGGTTAGTCAC	544	False	NA	NA	False	TATAAA	-16	NA	110628202	110655059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.21	chr7	+	4116	24	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	37.5798582580067	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGAGTGCCTGTGTGT	544	False	NA	26	True	AATAAA	-12	NA	110628202	110655579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648600_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.22	chr7	+	5287	23	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	9	0	intron_retention	FALSE	canonical	3	158	junction_8	10.2763469085626	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	552	False	NA	31	True	AATAAA	-17	NA	110628210	110655584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110651667_110652588_110653134_110654565
ES.31694.23	chr7	+	3953	24	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	131	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	37.8298348967793	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	692	False	NA	29	True	AATAAA	-15	NA	110628350	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110651513_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.24	chr7	+	3525	2	ISM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	22978	2	936	-2	intron_retention	FALSE	canonical	3	181	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	NA	False	NA	29	True	AATAAA	-15	NA	110651135	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_110651667_110652588
ES.31694.3	chr7	+	4508	24	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	158	junction_7	10.740626546023	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGAGACTGAGTTTTA	530	False	NA	NA	False	GATAAA	-17	NA	110628188	110655406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.4	chr7	+	5502	23	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	158	junction_6	10.4720209673442	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTGCCTGTGTGTCCT	534	False	NA	29	True	AATAAA	-15	NA	110628192	110655582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.5	chr7	+	3172	17	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	44.0514170458795	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGAGTGCCTGTGTGTCC	540	False	NA	28	True	AATAAA	-14	NA	110628198	110655581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645625_110652637_110652686_110653020_110653134_110654565
ES.31694.6	chr7	+	4245	25	NNC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.057294228742	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGAGTGCCTGTGTGTCC	541	False	NA	28	True	AATAAA	-14	NA	110628199	110655581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_110628389_110629420_110629520_110632897_110633128_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.7	chr7	+	4143	15	NIC	ENSMUSG00000005609.17	novel	2987	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	158	junction_7	7.32761063041838	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACAAAGCTCTTGGTGT	541	False	NA	NA	False	NA	NA	NA	110628199	110647186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969
ES.31694.8	chr7	+	5380	23	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	158	junction_7	10.9805425207312	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	541	False	NA	31	True	AATAAA	-17	NA	110628199	110655584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110651667_110652588_110652686_110653020_110653134_110654565
ES.31694.9	chr7	+	5830	22	NIC	ENSMUSG00000005609.17	novel	4300	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	158	junction_6	9.85564745960774	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	543	False	NA	31	True	AATAAA	-17	NA	110628201	110655584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_110628389_110629420_110629520_110632897_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110653134_110654565
ES.31695.1	chr7	+	166	1	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	110668357	110668523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_110668400_110668500
ES.31696.1	chr7	+	1874	4	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	TTTAAA	-18	NA	110672924	110675125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_110673157_110673243_110674448_110674542_110674649_110674793
ES.31696.2	chr7	+	2219	1	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCACAAACCTTATGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	110672924	110675143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_110672900_110675100
ES.31696.3	chr7	+	2101	2	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAACA	NA	False	NA	NA	False	AATGAA	-45	NA	110672924	110675120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_110674448_110674542
ES.31696.4	chr7	+	2074	2	Antisense	novelGene_ENSMUSG00000005610.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCACAAACCTTATGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	110672924	110675143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_110674649_110674793
ES.31697.1	chr7	+	177	1	Intergenic	novelGene_25989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAACCAAGAA	NA	False	NA	NA	False	NA	NA	NA	110693070	110693247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_110693100_110693200
ES.31698.1	chr7	-	7734	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	236	12	-236	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTATGGTCCTGAGCT	NA	False	NA	NA	False	NA	NA	NA	110682212	110667192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.100	chr7	-	3640	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	0	intron_retention	FALSE	canonical	1	45	junction_9	1352.13643819697	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682225	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.101	chr7	-	3699	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-14	0	intron_retention	FALSE	canonical	3	102	junction_19	1781.12217085185	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682251	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680779_110681991
ES.31698.102	chr7	-	7943	12	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	5035	junction_4	412.563163208209	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110674449_110674543_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110680172_110680713
ES.31698.103	chr7	-	4826	18	NIC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	5111	junction_17	479.850697656597	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.104	chr7	-	7024	17	NIC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	5282	junction_3	423.453048607517	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.105	chr7	-	5328	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	5035	junction_7	475.248966592157	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.106	chr7	-	3766	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-15	0	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682252	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.107	chr7	-	3666	21	NNC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	12	0	intron_retention	FALSE	canonical	1	2	junction_17	1660.35117068649	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679396_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.109	chr7	-	3738	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	80	junction_13	1297.1663360577	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676649_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.110	chr7	-	3942	21	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	7995	22	NA	NA	-42	0	intron_retention	FALSE	canonical	3	4823	junction_8	530.346716780636	5074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682279	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.112	chr7	-	3651	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_19	1365.52415851936	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682225	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679462_110680729_110680841_110681991
ES.31698.113	chr7	-	3246	8	NIC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	-590	0	intron_retention	FALSE	canonical	3	1102	junction_7	1731.58101639124	5067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110676006	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902
ES.31698.115	chr7	-	3778	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_2	1326.2602443818	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682210	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673150_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.117	chr7	-	3874	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_21	1322.60809819307	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110681936	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681629
ES.31698.118	chr7	-	3779	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	1337.95832887124	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682220	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674249_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.119	chr7	-	3609	20	NIC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	102	junction_18	1690.34821930071	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.12	chr7	-	3603	6	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-273	1364	intron_retention	FALSE	canonical	3	5387	junction_4	543.326642085587	5072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCACATTGAAAACTGAGT	NA	False	NA	-10	True	ATTAAA	-19	NA	110674865	110669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110674449_110674543_110674649_110674793
ES.31698.120	chr7	-	3425	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1336.47833502829	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671911_110673431_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.121	chr7	-	4740	20	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	3548	22	NA	NA	-58	0	intron_retention	FALSE	canonical	3	5111	junction_19	458.766749828191	5074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682295	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.122	chr7	-	3836	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_20	1338.20292906759	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682239	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680193_110680713_110680841_110681991
ES.31698.124	chr7	-	3607	21	NNC	ENSMUSG00000005610.18	novel	3548	22	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_4	1672.16042591613	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673733_110673934_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.125	chr7	-	3755	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	3	0	intron_retention	FALSE	canonical	1	82	junction_2	1310.12708009048	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682234	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673299_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.128	chr7	-	3781	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_11	1336.16638813437	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676277_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.129	chr7	-	4091	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	5035	junction_8	483.320108727125	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682213	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.13	chr7	-	5337	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1362	intron_retention	FALSE	canonical	1	1	junction_22	1733.17335012117	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACGCACATTGAAAACTGA	NA	False	NA	-12	True	ATTAAA	-17	NA	110682212	110669776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681629_110681817_110681991
ES.31698.133	chr7	-	3865	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	1335.05458796053	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110681307	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681009
ES.31698.134	chr7	-	3807	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_15	1335.32458452308	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682212	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677403_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.135	chr7	-	3816	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-11	0	intron_retention	FALSE	canonical	1	2	junction_18	1328.55144890251	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682248	110671138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679396_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.136	chr7	-	3970	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	4823	junction_9	490.228811372812	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682251	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.138	chr7	-	6486	12	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	76	junction_1	1662.45519917266	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110676040_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.139	chr7	-	8006	15	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	10	-1	intron_retention	FALSE	canonical	3	5035	junction_6	493.715215772934	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682214	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110679530_110680105_110680172_110680713
ES.31698.14	chr7	-	4944	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	1205	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTTTCTTCATTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	110682225	110669933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.141	chr7	-	4969	17	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5111	junction_16	489.208444677471	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.142	chr7	-	3652	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	1657.94874091451	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682217	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673127_110673239_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.143	chr7	-	3759	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1102	junction_8	1158.51655791294	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682213	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.145	chr7	-	3760	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1102	junction_7	1150.81565919153	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.146	chr7	-	5478	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	5035	junction_8	448.580105139142	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682225	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.147	chr7	-	4573	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_9	521.630942333754	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.149	chr7	-	6306	17	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_6	451.167266480792	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110674146_110674232_110674449_110674543_110674649_110674793_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713
ES.31698.15	chr7	-	4965	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1204	intron_retention	FALSE	canonical	0	0	junction_9	1329.05274606167	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTTTTCTTCATTTG	NA	False	NA	-4	True	AATAAA	-16	NA	110682213	110669934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675589_110675918_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.150	chr7	-	3512	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	189	junction_8	1351.64711461153	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.151	chr7	-	5321	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5035	junction_8	477.198282286602	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.152	chr7	-	3883	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	4823	junction_9	531.187281003602	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682227	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.154	chr7	-	3844	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1102	junction_8	1135.82740046915	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682239	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.155	chr7	-	3611	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	147	junction_20	1647.70090125605	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.156	chr7	-	3557	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	13	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	1307.46120148494	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682211	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671426_110671654_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.159	chr7	-	3913	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	4823	junction_8	516.934064944457	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682251	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.16	chr7	-	4802	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1204	intron_retention	FALSE	non_canonical	0	0	junction_19	1365.52415851936	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTTTTCTTCATTTG	NA	False	NA	-4	True	AATAAA	-16	NA	110682213	110669934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679455_110680763_110680841_110681991
ES.31698.160	chr7	-	5979	16	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	23	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	1486.93209887562	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682201	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110673752_110673886_110674449_110674543_110674649_110674793_110676060_110676141_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.162	chr7	-	6696	15	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5282	junction_4	472.561215125423	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713
ES.31698.164	chr7	-	3775	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	19	-1	intron_retention	FALSE	canonical	0	0	junction_1	1318.01154255335	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682205	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671956_110673031_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.167	chr7	-	3671	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	13	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	1337.44149256397	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682211	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676012_110676207_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.17	chr7	-	5821	24	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	7995	22	NA	NA	-19	1204	intron_retention	FALSE	canonical	1	1	junction_22	1703.68400892549	5097	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTTTTCTTCATTTG	NA	False	NA	-4	True	AATAAA	-16	NA	110721910	110669934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991_110682730_110720114_110720231_110721714
ES.31698.171	chr7	-	4531	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_8	554.949394311692	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.174	chr7	-	3649	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	2067.17379887111	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673106_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674915_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.175	chr7	-	3755	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_9	1329.05274606167	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682213	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675568_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.176	chr7	-	3774	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	1332.69071248636	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682208	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679521_110680105_110680172_110680713_110680841_110681991
ES.31698.179	chr7	-	3811	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	1	2	junction_11	1335.77383111482	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676308_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.18	chr7	-	4960	21	ISM	ENSMUSG00000110424.2_ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-71	-1203	-58	1203	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5079	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682295	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.182	chr7	-	4363	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_9	527.420553258972	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.183	chr7	-	4882	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5111	junction_17	478.923244422781	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.185	chr7	-	3666	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	13	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	1640.2565188104	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682211	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673552_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.186	chr7	-	3798	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	1337.20344795565	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682239	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678515_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.187	chr7	-	4738	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-1	intron_retention	FALSE	canonical	3	5111	junction_18	469.978305908572	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682213	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.188	chr7	-	3869	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_9	525.48989286189	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.189	chr7	-	3808	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	1337.44149256397	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682231	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676060_110676138_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.190	chr7	-	3877	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	4823	junction_8	478.912609460223	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.192	chr7	-	3859	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_7	1338.06955745565	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682240	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674749_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.197	chr7	-	3773	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	18	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	1338.1085493322	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682206	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677636_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.198	chr7	-	3808	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	1337.20344795565	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682223	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677771_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.2	chr7	-	7005	5	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-13	-237	intron_retention	FALSE	canonical	3	5282	junction_3	634.336415082723	5072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGTATGGTCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	110674605	110667193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543
ES.31698.200	chr7	-	4481	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1102	junction_6	1223.82178350668	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.201	chr7	-	3673	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_15	1672.19592975823	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682220	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677539_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.202	chr7	-	3727	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	1755.75796373272	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682212	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674607_110674793_110674920_110675486_110675601_110675902_110676046_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.203	chr7	-	3700	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_17	1660.67189414405	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682245	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678593_110679384_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.204	chr7	-	3786	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	1337.14210080022	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGTTGTACATGACTTC	NA	False	NA	-20	True	AATAAA	-15	NA	110682222	110671139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673741_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.207	chr7	-	5334	16	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-35	-2	intron_retention	FALSE	canonical	3	5387	junction_4	430.561989342611	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110681437	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110674449_110674543_110674649_110674793_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.208	chr7	-	3776	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_3	1307.93959758458	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682212	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673447_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.209	chr7	-	3802	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	8	-2	intron_retention	FALSE	canonical	3	79	junction_3	1292.2405896336	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682216	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673469_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.21	chr7	-	4816	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1203	intron_retention	FALSE	canonical	3	147	junction_20	1647.70090125605	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682213	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.211	chr7	-	3629	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	13	-2	intron_retention	FALSE	canonical	3	166	junction_7	1644.90505805046	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682211	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674607_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.212	chr7	-	4256	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-2	intron_retention	FALSE	canonical	3	5035	junction_7	495.209398906596	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682212	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.214	chr7	-	3774	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_14	1337.78394955673	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682213	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677244_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.217	chr7	-	9461	8	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-2	intron_retention	FALSE	canonical	3	5282	junction_1	302.029056582985	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGTTGTACATGACTT	NA	False	NA	-21	True	AATAAA	-14	NA	110682212	110671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110673752_110673886_110674449_110674543_110676531_110676615_110677384_110677479_110677547_110677628_110679530_110680105_110680172_110680713
ES.31698.219	chr7	-	3953	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	4823	junction_8	543.911757548961	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.22	chr7	-	4978	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1203	intron_retention	FALSE	canonical	0	0	junction_21	1335.05458796053	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110682004
ES.31698.222	chr7	-	3780	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	15	-3	intron_retention	FALSE	canonical	0	0	junction_12	1333.56980045981	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682209	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676521_110676607_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.223	chr7	-	4646	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	4	-3	intron_retention	FALSE	canonical	3	4823	junction_6	490.146669666812	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682233	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.224	chr7	-	3870	23	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	7995	22	NA	NA	-13	-3	multi-exon	FALSE	canonical	0	0	junction_21	1741.70629326057	5092	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110721904	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110720114_110720231_110721714
ES.31698.225	chr7	-	3761	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	76	junction_10	1322.53667310237	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676040_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.227	chr7	-	3555	20	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	2043.86615886321	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682227	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676060_110676141_110676284_110676431_110676485_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.228	chr7	-	3815	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-15	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	1780.40025691695	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682252	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674554_110674649_110674793_110674920_110675486_110675601_110675902_110676065_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.230	chr7	-	3710	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	76	junction_10	1730.20916644121	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676040_110676144_110676284_110676431_110676531_110676615_110676649_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.231	chr7	-	4847	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	4	-3	intron_retention	FALSE	canonical	3	5111	junction_17	480.371943552337	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682233	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110676064_110676144_110676284_110676431_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.233	chr7	-	3764	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	26	-3	intron_retention	TRUE	non_canonical	0	0	junction_9	1777.90087569851	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682198	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675908_110676060_110676141_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.234	chr7	-	3763	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_13	1313.01703950548	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676865_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.235	chr7	-	3871	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-3	intron_retention	FALSE	canonical	3	4823	junction_9	528.579537534324	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682213	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.236	chr7	-	3743	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	166	junction_7	1305.53679805119	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674607_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.237	chr7	-	3516	20	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_13	1375.2559268245	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682213	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110677486_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.239	chr7	-	3777	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	1338.06955745565	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674641_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.24	chr7	-	4950	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	111	1203	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_20	1661.11195889982	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110681923	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681629
ES.31698.241	chr7	-	3761	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_15	1368.22757153187	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677585_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.242	chr7	-	3780	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	1337.88210300532	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674440_110674539_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.244	chr7	-	3649	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_16	1370.13382101895	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682208	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.245	chr7	-	4365	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	4823	junction_8	502.678572748034	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682225	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.249	chr7	-	3773	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_21	1335.05458796053	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110682003
ES.31698.251	chr7	-	4644	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_11	1441.11308864227	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682223	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110676700_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.252	chr7	-	3682	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_17	1360.37706170017	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.253	chr7	-	3768	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_15	1335.32458452308	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677377_110677489_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.254	chr7	-	3779	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	1337.78394955673	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676949_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.256	chr7	-	3660	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	1671.09768116648	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682213	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674134_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.257	chr7	-	3703	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1711.10843744946	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671858_110671900_110671965_110673035_110673158_110673244_110673418_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.258	chr7	-	3507	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1631.97883445214	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671719_110671882_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.26	chr7	-	5099	19	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1203	intron_retention	FALSE	canonical	3	1102	junction_6	1190.7863985256	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.261	chr7	-	4174	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	5035	junction_7	493.84133960014	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.263	chr7	-	3630	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	1307.46120148494	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682223	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671561_110671726_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.264	chr7	-	3763	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_14	1337.78394955673	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682212	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676933_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.268	chr7	-	3872	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_14	1337.78394955673	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGTTGTACATGACT	NA	False	NA	-22	True	AATAAA	-13	NA	110682213	110671141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110677041_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.27	chr7	-	5015	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1203	intron_retention	FALSE	canonical	1	2	junction_11	1335.77383111482	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676308_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.270	chr7	-	5125	15	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	4	-4	intron_retention	FALSE	canonical	3	189	junction_4	1533.38252878785	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682220	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110674449_110674543_110674920_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.273	chr7	-	4085	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	-4	intron_retention	FALSE	canonical	0	0	junction_21	1335.05458796053	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682213	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681629
ES.31698.274	chr7	-	3819	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_20	1338.20292906759	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682254	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680720_110680841_110681991
ES.31698.275	chr7	-	5997	12	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	16	-4	intron_retention	FALSE	canonical	3	5111	junction_11	391.049509663757	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682208	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110674449_110674543_110674649_110674793_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.276	chr7	-	4671	17	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	16	-4	intron_retention	FALSE	canonical	3	5035	junction_7	492.057982959072	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682208	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110676284_110676431_110676531_110676615_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.277	chr7	-	5110	16	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-4	intron_retention	FALSE	canonical	3	5035	junction_5	527.280882347245	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682212	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110674449_110674543_110674920_110675486_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.278	chr7	-	3756	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	1337.88210300532	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGTTGTACATGAC	NA	False	NA	-23	True	AATAAA	-12	NA	110682212	110671142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674571_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.28	chr7	-	4949	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1203	intron_retention	FALSE	canonical	3	166	junction_7	1305.53679805119	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674607_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.281	chr7	-	3650	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	11	25	11	-25	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAATAAACATTGTGATA	NA	False	NA	-44	True	NA	NA	NA	110682213	110671163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.282	chr7	-	3723	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	4248	11	-66	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGTCATGTTCATGCC	NA	False	NA	-85	True	NA	NA	NA	110682213	110671204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.283	chr7	-	3620	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	12	4363	-1	-181	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTTTGAGAGATCATT	NA	False	NA	2	True	AAGAAA	-23	NA	110682225	110671319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.285	chr7	-	3483	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	4487	12	132	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTATATTGCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	110682212	110671443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.286	chr7	-	3329	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	1	356	1	81	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTGGTTGTTACAGAAA	NA	False	NA	NA	False	NA	NA	NA	110682223	110671494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.287	chr7	-	3060	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	12	614	12	46	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTTTTTGTAGTGTGA	NA	False	NA	NA	False	TTTAAA	-32	NA	110682212	110671752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.288	chr7	-	3182	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	17	4796	4	46	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTTTTTGTAGTGTGA	NA	False	NA	NA	False	TTTAAA	-32	NA	110682220	110671752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.289	chr7	-	168	1	Intergenic	novelGene_25990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAACAAAGCC	NA	False	NA	NA	False	NA	NA	NA	110706887	110706719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110706700_110706900
ES.31698.29	chr7	-	4853	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1203	intron_retention	FALSE	canonical	3	76	junction_9	1658.11369558906	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682212	110669935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676040_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.290	chr7	-	3413	1	FSM	ENSMUSG00000110424.2	ENSMUST00000210340.2	3434	1	-20	41	-17	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAAAACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	110721908	110718495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110718500_110721900
ES.31698.291	chr7	-	1725	3	NNC	ENSMUSG00000110424.2	novel	605	3	NA	NA	2	-41	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAAAACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	110721880	110718495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110718916_110719091_110720231_110721714
ES.31698.292	chr7	-	2362	3	NNC	ENSMUSG00000110424.2	novel	605	3	NA	NA	-16	-41	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAAAAACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	110721907	110718495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110718917_110719091_110720231_110721105
ES.31698.293	chr7	-	2990	1	FSM	ENSMUSG00000110424.2	ENSMUST00000210340.2	3434	1	-21	465	-18	-465	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGCATACCAGAGCACC	NA	False	NA	NA	False	NA	NA	NA	110721909	110718919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110718900_110721900
ES.31698.31	chr7	-	4803	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1202	intron_retention	FALSE	non_canonical	0	0	junction_1	1307.46120148494	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682213	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671498_110671685_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.32	chr7	-	5096	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-5	1202	intron_retention	FALSE	canonical	3	4823	junction_8	530.346716780636	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682231	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.33	chr7	-	4715	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	canonical	3	189	junction_8	1351.64711461153	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.34	chr7	-	4811	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1202	intron_retention	FALSE	canonical	3	102	junction_18	1690.34821930071	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682213	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.37	chr7	-	4956	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	1	1202	intron_retention	FALSE	canonical	0	0	junction_3	1307.93959758458	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682223	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673447_110673581_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.38	chr7	-	4963	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	canonical	3	1102	junction_7	1162.05444444568	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.4	chr7	-	5206	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	-15	2804	-15	1378	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTACCTTGAAAGCAGT	NA	False	NA	4	True	ATTAAA	-33	NA	110682252	110669760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.41	chr7	-	4751	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	canonical	0	0	junction_5	1631.97883445214	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110673916_110674040_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.42	chr7	-	5147	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	1202	intron_retention	FALSE	canonical	3	4823	junction_9	490.228811372812	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682225	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.44	chr7	-	4690	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	canonical	0	0	junction_9	1394.78626923343	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.45	chr7	-	6341	17	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1202	intron_retention	FALSE	canonical	3	1102	junction_6	1258.91270050786	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682213	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674920_110675902_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713
ES.31698.48	chr7	-	6693	16	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	canonical	3	5111	junction_15	430.03966742099	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110680172_110680713_110680841_110681991
ES.31698.5	chr7	-	5046	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	11	-1371	11	1371	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAACTGAGTACCTTGA	NA	False	NA	-3	True	ATTAAA	-26	NA	110682213	110669767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.55	chr7	-	4608	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1202	intron_retention	FALSE	non_canonical	0	0	junction_1	1318.01154255335	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682212	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671676_110673128_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.56	chr7	-	4910	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	26	1202	intron_retention	FALSE	canonical	3	102	junction_19	1345.03087232227	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGGTTTTTTCTTCATT	NA	False	NA	-6	True	AATAAA	-14	NA	110682198	110669936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.57	chr7	-	5173	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-14	1201	intron_retention	FALSE	canonical	3	4823	junction_8	529.912823019032	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGTTTTTTCTTCAT	NA	False	NA	-7	True	AATAAA	-13	NA	110682251	110669937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.58	chr7	-	5076	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1201	intron_retention	FALSE	canonical	3	4823	junction_8	516.934064944457	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGTTTTTTCTTCAT	NA	False	NA	-7	True	AATAAA	-13	NA	110682212	110669937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.59	chr7	-	4978	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1201	intron_retention	FALSE	canonical	0	0	junction_8	1333.77474156039	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGTTTTTTCTTCAT	NA	False	NA	-7	True	AATAAA	-13	NA	110682212	110669937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674909_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.6	chr7	-	4978	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	10	1368	intron_retention	FALSE	canonical	3	102	junction_18	1690.34821930071	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGAAAACTGAGTACCT	NA	False	NA	-6	True	ATTAAA	-23	NA	110682214	110669770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.60	chr7	-	4982	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1201	intron_retention	FALSE	non_canonical	0	0	junction_14	1337.78394955673	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGTTTTTTCTTCAT	NA	False	NA	-7	True	AATAAA	-13	NA	110682212	110669937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676944_110677227_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.61	chr7	-	4824	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	16	1201	intron_retention	FALSE	canonical	1	45	junction_9	1352.13643819697	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGTTTTTTCTTCAT	NA	False	NA	-7	True	AATAAA	-13	NA	110682208	110669937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.64	chr7	-	6344	16	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1200	intron_retention	FALSE	canonical	3	1102	junction_3	1224.53297038322	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682212	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.66	chr7	-	4865	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	307	1200	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_21	1322.60809819307	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110681727	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681629
ES.31698.7	chr7	-	5088	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1365	intron_retention	FALSE	canonical	3	102	junction_19	1345.03087232227	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCACATTGAAAACTGAGTA	NA	False	NA	-9	True	ATTAAA	-20	NA	110682213	110669773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.70	chr7	-	4910	23	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	1200	intron_retention	FALSE	non_canonical	0	0	junction_1	1307.46120148494	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682213	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110670446_110670524_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.72	chr7	-	4839	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	96	1200	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	1335.05458796053	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110681306	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681234
ES.31698.74	chr7	-	4898	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1200	intron_retention	FALSE	non_canonical	0	0	junction_4	1337.14210080022	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682212	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673733_110673957_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.77	chr7	-	4995	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	1200	intron_retention	FALSE	non_canonical	0	0	junction_20	1338.20292906759	5079	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682225	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680719_110680841_110681991
ES.31698.78	chr7	-	6031	18	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1200	intron_retention	FALSE	canonical	3	5111	junction_17	469.221662818472	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682212	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.79	chr7	-	5565	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	13	1200	intron_retention	FALSE	canonical	1	45	junction_9	1386.40228719483	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGGTTTTTTCTTCA	NA	False	NA	-8	True	AATAAA	-12	NA	110682211	110669938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.80	chr7	-	4460	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	3510	12	672	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTCCCTGTCAAATA	NA	False	NA	NA	False	AATAGA	-14	NA	110682212	110670466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.81	chr7	-	4341	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	3629	12	553	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTCTGCTGGGACAG	NA	False	NA	NA	False	TATAAA	-14	NA	110682212	110670585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.82	chr7	-	4089	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	24	3882	11	300	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTGAGATACCTG	NA	False	NA	NA	False	NA	NA	NA	110682213	110670838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.83	chr7	-	3922	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	12	-248	12	248	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTCTGCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	110682212	110670890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.84	chr7	-	3984	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-1	245	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	5076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTCTTTGGCTCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	110682225	110670893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.85	chr7	-	3961	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	25	4009	12	173	multi-exon	FALSE	canonical	3	4823	junction_9	518.544999107863	5076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAACTATTCCCTATCAA	NA	False	NA	NA	False	NA	NA	NA	110682212	110670965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.86	chr7	-	3838	21	ISM	ENSMUSG00000110424.2_ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-70	-82	-57	82	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	5075	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTTGGGAAATTTTTA	NA	False	NA	63	True	AATGAA	-40	NA	110682294	110671056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.87	chr7	-	4677	24	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	7995	22	NA	NA	-11	68	intron_retention	FALSE	canonical	1	1	junction_22	1703.68400892549	5093	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCTCCGTTTAAGAAC	NA	False	NA	49	True	AATGAA	-26	NA	110721902	110671070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991_110682730_110720114_110720231_110721714
ES.31698.88	chr7	-	3465	21	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	22	intron_retention	FALSE	non_canonical	0	0	junction_1	1336.47833502829	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATCTGCAAAGTAATGA	NA	False	NA	3	True	AATAAA	-38	NA	110682212	110671116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671914_110673416_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.9	chr7	-	5090	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1364	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	5079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCACATTGAAAACTGAGT	NA	False	NA	-10	True	ATTAAA	-19	NA	110682212	110669774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
ES.31698.94	chr7	-	3760	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	11	7	intron_retention	FALSE	canonical	0	0	junction_4	1337.14210080022	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACATGACTTCAAATAGTA	NA	False	NA	-12	True	AATAAA	-23	NA	110682213	110671131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673772_110673942_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.95	chr7	-	3756	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	-8	1	intron_retention	FALSE	canonical	3	102	junction_19	1345.03087232227	5074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGTACATGACTTCAA	NA	False	NA	-18	True	AATAAA	-17	NA	110682245	110671137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
ES.31698.96	chr7	-	3781	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	12	1	intron_retention	FALSE	canonical	0	0	junction_16	1338.1085493322	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGTACATGACTTCAA	NA	False	NA	-18	True	AATAAA	-17	NA	110682212	110671137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677539_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31698.97	chr7	-	3763	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	14	1	intron_retention	FALSE	canonical	0	0	junction_5	1337.95832887124	5074	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGTACATGACTTCAA	NA	False	NA	-18	True	AATAAA	-17	NA	110682210	110671137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674122_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ES.31699.1	chr7	-	176	1	Intergenic	novelGene_25991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	110726986	110726810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110726800_110727000
ES.317.1	chr1	-	7624	16	FSM	ENSMUSG00000026110.16	ENSMUST00000151952.8	7251	16	-9	-364	-9	364	multi-exon	FALSE	canonical	2	9	junction_15	49.471158825679	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTATTAGAAATGTACA	NA	False	NA	NA	False	AATAAA	-23	NA	37580106	37478056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119_37575486_37580045
ES.317.2	chr1	-	7243	16	NIC	ENSMUSG00000026110.16	novel	7251	16	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	53.3381664476761	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGATAGAATTTTTTT	NA	False	NA	42	True	AATAAA	-16	NA	37580116	37478420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119_37575486_37580045
ES.317.3	chr1	-	7249	16	FSM	ENSMUSG00000026110.16	ENSMUST00000151952.8	7251	16	0	2	0	-2	multi-exon	FALSE	canonical	2	9	junction_15	49.471158825679	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTGGATAGAATTTTT	NA	False	NA	40	True	AATAAA	-14	NA	37580097	37478422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119_37575486_37580045
ES.317.4	chr1	-	7194	16	NNC	ENSMUSG00000026110.16	novel	7251	16	NA	NA	-27	-42	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	63.0617334222762	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAATCAAGATTCCTTC	NA	False	NA	0	True	AATAAA	-17	NA	37580124	37478462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489474_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537680_37537822_37575119_37575486_37580045
ES.317.5	chr1	-	2673	16	FSM	ENSMUSG00000026110.16	ENSMUST00000151952.8	7251	16	29	4549	29	-173	multi-exon	FALSE	canonical	2	9	junction_15	49.471158825679	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTATATTACTGTACTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	37580068	37482969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119_37575486_37580045
ES.317.6	chr1	-	214	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37523782	37523568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_37523600_37523800
ES.3170.1	chr10	+	8869	3	FSM	ENSMUSG00000001436.16	ENSMUST00000136150.8	826	3	26	-8069	-4	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTCTGTTGTGAGACA	NA	False	NA	15	True	ATTAAA	-17	NA	76868100	76886264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76868125_76874183_76874414_76877649
ES.3170.10	chr10	+	2125	6	NNC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5318704032635	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869083	76886260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76869182_76874183_76874414_76877649_76878404_76878731_76878809_76880475_76880555_76885373
ES.3170.11	chr10	+	2221	6	NNC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.1875602643405	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGCTTTTCTGTTGT	NA	False	NA	9	True	ATTAAA	-11	NA	76869083	76886258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76869182_76874183_76874400_76877716_76878404_76878615_76878809_76880594_76880737_76885373
ES.3170.13	chr10	+	507	3	NNC	ENSMUSG00000001436.16	novel	2863	5	NA	NA	-17	-2646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAAAAAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	76869084	76875035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76869280_76874183_76874414_76874953
ES.3170.15	chr10	+	3148	3	ISM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	59	5775	3	-242	intron_retention	FALSE	canonical	0	0	junction_2	55	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTGCCTCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	76869104	76880490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76869182_76874183_76874414_76877649
ES.3170.17	chr10	+	3300	5	NNC	ENSMUSG00000001436.16	novel	685	3	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8559035020759	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACACTGTGTTCTCTTC	NA	False	NA	NA	False	ACTAAA	-32	NA	76869298	76882102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76869914_76874183_76874414_76877649_76878404_76878615_76878809_76880594
ES.3170.18	chr10	+	2024	5	NNC	ENSMUSG00000001436.16	novel	2309	6	NA	NA	-4152	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.74165738677394	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGCTTTTCTGTTGT	NA	False	NA	9	True	ATTAAA	-11	NA	76874181	76886258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76874414_76877649_76878285_76878615_76878809_76880475_76880555_76885373
ES.3170.19	chr10	+	179	1	Intergenic	novelGene_2487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAATGAGTGTA	NA	False	NA	NA	False	NA	NA	NA	76877201	76877380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76877200_76877400
ES.3170.2	chr10	+	2096	6	NNC	ENSMUSG00000001436.16	novel	391	3	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8648096204299	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	12	True	ATTAAA	-14	NA	76868109	76886261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76868234_76874183_76874414_76877649_76878285_76878731_76878809_76880594_76880737_76885373
ES.3170.20	chr10	+	1979	4	ISM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	8601	5	-687	-5	3prime_fragment	FALSE	canonical	3	91	junction_1	3.68178700572909	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76877646	76886260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76878404_76878615_76878809_76880594_76880737_76885373
ES.3170.3	chr10	+	2308	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	-3	4	-3	-3	multi-exon	FALSE	canonical	0	0	junction_2	43.968170305347	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTTTCTGTTGTGAGA	NA	False	NA	13	True	ATTAAA	-15	NA	76868514	76886262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ES.3170.4	chr10	+	1997	7	NNC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.4658850666027	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGACACTGTGTTCTCT	NA	False	NA	NA	False	ACTAAA	-30	NA	76869039	76882100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76880825_76880942_76881680
ES.3170.5	chr10	+	2326	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	17	4	17	-4	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTTTTCTGTTGTGAG	NA	False	NA	12	True	ATTAAA	-14	NA	76869062	76886261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ES.3170.6	chr10	+	2404	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-22	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.9535941116332	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGCTTTTCTGTTGT	NA	False	NA	9	True	ATTAAA	-11	NA	76869079	76886258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76869280_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ES.3170.7	chr10	+	2518	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	-20	-5	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTTTTCTGTTGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	76869081	76886260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
ES.3170.8	chr10	+	9036	3	ISM	ENSMUSG00000001436.16	ENSMUST00000136925.8	2863	5	-20	-4155	-20	-8	intron_retention	FALSE	canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGGGCTTTTCTGTTG	NA	False	NA	8	True	ATTAAA	-10	NA	76869081	76886257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_76869280_76874183_76874414_76877649
ES.3170.9	chr10	+	3390	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	38	-1081	-18	1080	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTGTTTTATCCACTT	NA	False	NA	NA	False	AGTAAA	-20	NA	76869083	76887346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ES.31700.1	chr7	-	175	1	Intergenic	novelGene_25992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110793880	110793705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_110793700_110793900
ES.31701.1	chr7	-	2309	11	NNC	ENSMUSG00000038296.15	novel	2530	11	NA	NA	31084	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTCTTCGCGGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	111348100	111070868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111347655
ES.31702.1	chr7	+	1485	2	Antisense	novelGene_ENSMUSG00000038296.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTAGTCATCTGTTAG	NA	False	NA	NA	False	AATAAA	-24	NA	111378906	111386288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_111378973_111384869
ES.31703.1	chr7	+	5981	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-286	-998	-284	97	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACTCTGTGACGAAGT	NA	False	NA	101	True	TTTAAA	-24	NA	111622426	111710688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.10	chr7	+	5558	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	72.2165429865816	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622683	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681760_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.13	chr7	+	5627	29	FSM	ENSMUSG00000059263.10	ENSMUST00000210309.2	5816	29	-87	276	-26	1	multi-exon	FALSE	canonical	1	5	junction_1	94.014836812156	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTATCTTAGTCATTA	NA	False	NA	5	True	AATAAA	-17	NA	111622684	111710592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111646133_111646194_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.14	chr7	+	5850	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-28	-1125	-26	-53	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTGACTCTTTGGT	NA	False	NA	NA	False	AAGAAA	-19	NA	111622684	111710815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.17	chr7	+	5357	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-25	208	-25	-208	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGTGCCACATGATTC	NA	False	NA	NA	False	AATAAA	-23	NA	111622685	111710383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.19	chr7	+	5793	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-24	-229	-24	-48	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTCTTTGGTTTGAG	NA	False	NA	NA	False	AAGAAA	-24	NA	111622686	111710820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.2	chr7	+	5856	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-221	-95	-221	95	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTACTCTGTGACGAA	NA	False	NA	99	True	TTTAAA	-22	NA	111622489	111710686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.21	chr7	+	7326	27	NIC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-22	0	intron_retention	FALSE	canonical	3	255	junction_11	29.7683611481013	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622688	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.22	chr7	+	4844	29	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	112.136851522538	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATCTTCTGTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	111622688	111709695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111670708_111670889_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707694_111707785_111707912_111709151
ES.31703.23	chr7	+	5488	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	81.8835366862406	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111622688	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.24	chr7	+	5431	27	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	73.4712035526797	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTATCTTAGTCAT	NA	False	NA	3	True	AATAAA	-15	NA	111622688	111710590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111709150
ES.31703.25	chr7	+	5554	27	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	73.223011870966	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111622689	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706126_111707746_111707912_111709151
ES.31703.26	chr7	+	5556	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	72.9963638532939	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTATCTTAGTCATTA	NA	False	NA	5	True	AATAAA	-17	NA	111622689	111710592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709157
ES.31703.28	chr7	+	4894	30	NNC	ENSMUSG00000059263.10	novel	5816	29	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.774518977501	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAATGAATGAATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	111622689	111709688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111646133_111646194_111651098_111651275_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.3	chr7	+	4845	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-193	888	-193	13	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTTTATTTCATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	111622517	111709703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.30	chr7	+	7385	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-21	0	intron_retention	FALSE	canonical	3	115	junction_12	66.4543739225875	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622689	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.33	chr7	+	5477	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2230476155439	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTATCTTAGTCAT	NA	False	NA	3	True	AATAAA	-15	NA	111622691	111710590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111631229_111631353_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.35	chr7	+	5383	28	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	110.499203952219	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTGTTATCTTAGT	NA	False	NA	0	True	AATAAA	-12	NA	111622692	111710587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658280_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701676_111703624_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.36	chr7	+	5899	20	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-18	15315	-18	1881	5prime_fragment	FALSE	canonical	3	255	junction_11	30.7527896624381	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTAAACTCAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	111622692	111695276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912
ES.31703.38	chr7	+	7188	26	NIC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_23	74.9480460052162	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111622693	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111707642_111707691_111707780_111707912_111709151
ES.31703.39	chr7	+	5677	30	NIC	ENSMUSG00000059263.10	novel	5816	29	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	106.272695694512	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622693	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111646133_111646194_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.4	chr7	+	4756	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-48	-11	-46	11	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTGTTTATTTCATT	NA	False	NA	NA	False	AATAAA	-27	NA	111622664	111709701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.40	chr7	+	4347	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-19	369	-17	-369	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGCCAGTGTAGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	111622693	111709321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.41	chr7	+	4581	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_27	91.2010396302017	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAATGAATGAATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	111622695	111709688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111709151
ES.31703.42	chr7	+	4512	27	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	98.0913714847708	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATGAATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	111622700	111709690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709149
ES.31703.44	chr7	+	9199	26	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-9	3	intron_retention	FALSE	canonical	3	118	junction_11	51.0169226825766	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGAATCTTCTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	111622701	111709693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.45	chr7	+	4583	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.4855787180115	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGAATGAATCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	111622701	111709689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655745_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.46	chr7	+	5565	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	71.9516489075911	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111622702	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707761_111707912_111709151
ES.31703.47	chr7	+	5397	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	-7	-693	-5	-208	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGTGCCACATGATTC	NA	False	NA	NA	False	AATAAA	-23	NA	111622705	111710383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.49	chr7	+	5730	30	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.768107717394	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622705	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111657041_111657170_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666439_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.5	chr7	+	6504	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	115	junction_12	66.4543739225875	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGAATGAATCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	111622668	111709689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.50	chr7	+	6247	22	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-5	2122	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	118.927577573425	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGACTATGCAATCAA	NA	False	NA	NA	False	NA	NA	NA	111622705	111695517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111646133_111646194_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912
ES.31703.53	chr7	+	5480	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-1	61	-1	-61	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCATGCAAGATGCTG	NA	False	NA	-57	True	AATAAA	-15	NA	111622709	111710530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.57	chr7	+	4567	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	91.6159605361735	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATCTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111622710	111709697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.59	chr7	+	5587	29	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	91.1039647762883	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTATCTTAGTCATTAA	NA	False	NA	6	True	AATAAA	-18	NA	111622713	111710593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111677010_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.6	chr7	+	817	2	ISM	ENSMUSG00000059263.10	ENSMUST00000210591.2	2784	4	-189	5096	-37	-5096	5prime_fragment	FALSE	canonical	3	352	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTAACTGTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	111622673	111652960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111622954_111652423
ES.31703.60	chr7	+	6393	27	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	8	0	intron_retention	FALSE	canonical	3	255	junction_11	29.7683611481013	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATGAATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	111622720	111709690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.61	chr7	+	4676	29	FSM	ENSMUSG00000059263.10	ENSMUST00000210309.2	5816	29	-40	1180	19	-2	multi-exon	FALSE	canonical	1	5	junction_1	94.014836812156	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAATGAATGAATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	111622731	111709688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111646133_111646194_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.62	chr7	+	5576	29	NNC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	91.1074928592706	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111622731	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707917_111709157
ES.31703.63	chr7	+	5508	28	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	73.0180840858382	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTATCTTAGTCATTAA	NA	False	NA	6	True	AATAAA	-18	NA	111622732	111710593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111677010_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.64	chr7	+	5222	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-14	-212	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	91.6159605361735	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGACTCGGTGCCACATG	NA	False	NA	NA	False	AATAAA	-19	NA	111622737	111710379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.66	chr7	+	4455	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	92.5110603998046	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGAATCTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	111622751	111709691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.67	chr7	+	4714	30	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	106.272695694512	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAATGAATGAATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	111622753	111709688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111646133_111646194_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.69	chr7	+	5299	27	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	29711	0	29559	0	3prime_fragment	FALSE	canonical	3	255	junction_10	30.3295752705948	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111652421	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.70	chr7	+	4226	27	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	29706	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.7220187306181	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAATGAATGAATCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	111652568	111709688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663641_111666291_111666442_111673678_111673775_111673863_111674017_111677010_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.71	chr7	+	4069	26	NIC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	29745	3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	75.8345567666878	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGAATCTTCTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	111652607	111709693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.72	chr7	+	4839	24	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	35467	2	-31735	-2	3prime_fragment	FALSE	canonical	3	255	junction_7	31.2460205405733	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGTTATCTTAGTCA	NA	False	NA	2	True	AATAAA	-14	NA	111658177	111710589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.73	chr7	+	4598	22	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	40860	0	-26342	0	3prime_fragment	FALSE	canonical	3	255	junction_5	32.0915640118338	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111663570	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.74	chr7	+	4658	23	ISM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	40858	-901	-26342	0	3prime_fragment	FALSE	canonical	3	115	junction_6	73.4101463476055	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111663570	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.75	chr7	+	4520	21	NNC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	-23623	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	83.7968376491619	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111666289	111710591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709150
ES.31703.76	chr7	+	3951	17	ISM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	58924	1	-8278	-1	3prime_fragment	FALSE	canonical	3	328	junction_16	20.7816024406204	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTATCTTAGTCAT	NA	False	NA	3	True	AATAAA	-15	NA	111681634	111710590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.77	chr7	+	5802	12	NIC	ENSMUSG00000059263.10	novel	5816	29	NA	NA	-3623	2	intron_retention	FALSE	canonical	3	328	junction_11	21.1937149579541	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTATCTTAGTCATTAA	NA	False	NA	6	True	AATAAA	-18	NA	111686289	111710593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.78	chr7	+	5506	6	NIC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	2639	-1	intron_retention	FALSE	canonical	3	328	junction_5	22.5884926455928	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGAATGAATCTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	111692551	111709689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111692694_111700944_111701121_111701645_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.8	chr7	+	4303	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	-29	1266	-29	-365	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGTGTAGCCTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	111622681	111709325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ES.31703.9	chr7	+	5496	28	NIC	ENSMUSG00000059263.10	novel	4697	29	NA	NA	-28	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_27	91.2010396302017	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTATCTTAGTCAT	NA	False	NA	3	True	AATAAA	-15	NA	111622682	111710590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111709151
ES.31704.1	chr7	-	3885	1	Genic_Genomic	ENSMUSG00000030772.7	novel	NA	NA	NA	NA	40307	1151	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTGGTCATGTTT	NA	False	NA	NA	False	NA	NA	NA	111717957	111714072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_111714100_111718000
ES.31704.10	chr7	-	2263	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	-50	1146	-50	-1146	multi-exon	FALSE	canonical	0	0	junction_7	18.9198092927352	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGTATAAGCATGCCT	NA	False	NA	-14	True	NA	NA	NA	111758314	111716369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
ES.31704.11	chr7	-	6408	1	Intergenic	novelGene_25993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAAAAAAAGCGTGATA	NA	False	NA	NA	False	NA	NA	NA	111747252	111740844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_111740800_111747300
ES.31704.2	chr7	-	3388	8	NNC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.7940265172991	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGGTATGGGTCCATT	NA	False	NA	-1	True	AATAAA	-23	NA	111758291	111715223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749958_111757389_111757626_111758172
ES.31704.4	chr7	-	3261	7	NNC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	633	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.3749573960018	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGTCCATGGTATG	NA	False	NA	-9	True	AATAAA	-15	NA	111757631	111715231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720882_111748163_111748252_111749817_111749956_111757389
ES.31704.5	chr7	-	3327	7	NNC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	633	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	25.8650343127551	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGTCCATGGTATG	NA	False	NA	-9	True	AATAAA	-15	NA	111757631	111715231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111747988_111748135_111749817_111749956_111757389
ES.31704.6	chr7	-	3181	6	NIC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	633	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.3971960779912	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGTCCATGGTATG	NA	False	NA	-9	True	AATAAA	-15	NA	111757631	111715231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111749817_111749956_111757389
ES.31704.7	chr7	-	2287	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	629	990	629	-990	3prime_fragment	FALSE	canonical	3	37	junction_5	9.03234926989282	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACAATCTGTAGTATA	NA	False	NA	NA	False	AATAAA	-26	NA	111757635	111716213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
ES.31704.9	chr7	-	2123	7	NNC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	631	-1146	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.3422111766532	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGTATAAGCATGCCT	NA	False	NA	-14	True	NA	NA	NA	111757633	111716369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_111717632_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
ES.31705.1	chr7	+	6637	20	FSM	ENSMUSG00000038244.15	ENSMUST00000050149.12	6669	20	27	5	-7	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.521026049295351	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACCGTTTCCTCTCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	111825089	111954396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_111825229_111834553_111834627_111870436_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102_111931247_111945928_111946116_111948600_111948690_111950531
ES.31706.1	chr7	+	175	1	Intergenic	novelGene_25994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGTTAAATG	NA	False	NA	NA	False	NA	NA	NA	111993563	111993738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_111993600_111993700
ES.31707.1	chr7	+	4447	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	4	3	4	-3	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTTCGCTGTTTCTTC	3333	False	NA	NA	False	AATGAA	-10	NA	112026916	112190896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31707.2	chr7	+	4240	12	NNC	ENSMUSG00000030770.16	novel	4454	13	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.8171246642566	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAAACTCTTCGCTGTT	3528	False	NA	NA	False	AATGAA	-5	NA	112027111	112190891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112175593_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31707.3	chr7	+	3468	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	201	785	2	-785	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCATCCGGGTCCTGCC	3530	False	NA	NA	False	AAGAAA	-17	NA	112027113	112190114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31707.4	chr7	+	3330	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	226	898	27	-898	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATGTTGGTCTCATGC	3555	False	NA	NA	False	AATGAA	-21	NA	112027138	112190001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31707.5	chr7	+	202	1	Intergenic	novelGene_25995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATAATGTCGTCAAA	8941	False	NA	NA	False	NA	NA	NA	112092069	112092271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112092100_112092300
ES.31707.6	chr7	+	4057	12	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	24468	-2712	24468	-10	3prime_fragment	FALSE	canonical	2	13	junction_1	5.05016160448405	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACAAACTCTTCGCTG	NA	False	NA	NA	False	AATGAA	-3	NA	112143375	112190889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31707.7	chr7	+	3631	6	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	55492	-2712	5943	-10	3prime_fragment	FALSE	canonical	3	16	junction_3	5.97996655509042	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATACAAACTCTTCGCTG	NA	False	NA	NA	False	AATGAA	-3	NA	112174399	112190889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ES.31708.1	chr7	-	1209	2	ISM	ENSMUSG00000085945.4	ENSMUST00000211302.2	1563	4	12202	-10	12179	10	3prime_fragment	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATATTAACAAACTA	NA	False	NA	NA	False	AATAAA	-23	NA	112267086	112264756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_112265938_112267058
ES.31709.1	chr7	+	599	2	NNC	ENSMUSG00000055320.19	novel	894	4	NA	NA	-3	-55834	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	112278521	112302902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112278934_112302715
ES.31709.10	chr7	+	1785	8	NIC	ENSMUSG00000055320.19	novel	2543	12	NA	NA	-48	-245	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.96729345286423	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTCTTTCTTTTTAA	NA	False	NA	NA	False	ACTAAA	-15	NA	112278668	112498421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.11	chr7	+	614	3	ISM	ENSMUSG00000055320.19	ENSMUST00000171197.8	1074	11	43	56186	-10	0	5prime_fragment	FALSE	canonical	3	21	junction_2	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	3901	False	NA	NA	False	NA	NA	NA	112358732	112441681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_112358847_112438622_112438688_112441246
ES.31709.12	chr7	+	9344	12	NIC	ENSMUSG00000055320.19	novel	9962	14	NA	NA	21	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.80554742635915	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTTATCTGCAACAGT	3942	False	NA	15	True	AATAAA	-21	NA	112358773	112505996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112358847_112438622_112438688_112441094_112441158_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.13	chr7	+	4704	3	NNC	ENSMUSG00000055320.19	novel	646	3	NA	NA	56	1828	intron_retention	TRUE	non_canonical	0	0	junction_2	11	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAAAAACTGTGTGGC	3977	False	NA	NA	False	NA	NA	NA	112358808	112443509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112358847_112438622_112442135_112442355
ES.31709.14	chr7	+	1481	1	Intergenic	novelGene_25996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGCCAGACACTTGATCA	3514	False	NA	NA	False	NA	NA	NA	112365153	112366634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112365200_112366600
ES.31709.15	chr7	+	157	1	Intergenic	novelGene_25997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	4735	False	NA	NA	False	NA	NA	NA	112366374	112366531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112366400_112366500
ES.31709.16	chr7	+	173	1	Intergenic	novelGene_25998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGAATGTTCTGGAAT	6898	False	NA	NA	False	NA	NA	NA	112382134	112382307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112382100_112382300
ES.31709.17	chr7	+	211	1	Intergenic	novelGene_26002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGGGAGCATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	112442137	112442348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112442100_112442300
ES.31709.18	chr7	+	10992	1	NIC	ENSMUSG00000055320.19	novel	9962	14	NA	NA	56157	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCAGCTTTCTTATCTG	NA	False	NA	8	True	AATAAA	-14	NA	112494997	112505989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112495000_112506000
ES.31709.19	chr7	+	4642	2	NNC	ENSMUSG00000055320.19	novel	9480	11	NA	NA	62202	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTTATCTGCAACAGT	1029	False	NA	15	True	AATAAA	-21	NA	112501042	112505996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112501786_112502097
ES.31709.2	chr7	+	9909	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	-1	-7365	-1	17	multi-exon	TRUE	canonical	2	15	junction_1	4.44804720826366	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACCTGCCTTTTTTTCC	NA	False	NA	50	True	NA	NA	NA	112278523	112506031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.20	chr7	+	3609	2	NNC	ENSMUSG00000055320.19	novel	9480	11	NA	NA	63448	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGTTGTTGAGA	2275	False	NA	29	True	AATAAA	-35	NA	112502288	112506010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112503705_112503817
ES.31709.3	chr7	+	2295	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	3	245	1	-245	multi-exon	FALSE	canonical	2	15	junction_1	4.44804720826366	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTCTTTCTTTTTAA	NA	False	NA	NA	False	ACTAAA	-15	NA	112278527	112498421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.4	chr7	+	2363	1	NIC	ENSMUSG00000055320.19	novel	2543	12	NA	NA	3	-77844	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGGGCGGAGAGAAGAAG	NA	False	NA	NA	False	TATAAA	-22	NA	112278529	112280892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112278500_112280900
ES.31709.5	chr7	+	2537	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	33	-27	-6	27	multi-exon	FALSE	canonical	2	15	junction_1	4.44804720826366	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTAGGTAATACTGAG	NA	False	NA	NA	False	AAAAAG	-20	NA	112278557	112498693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.6	chr7	+	2741	5	NNC	ENSMUSG00000055320.19	novel	894	4	NA	NA	-6	1829	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.78919791562347	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAAAACTGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	112278557	112443510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112442125_112442344
ES.31709.7	chr7	+	2448	12	NIC	ENSMUSG00000055320.19	novel	9962	14	NA	NA	-1	-209	intron_retention	FALSE	canonical	1	3	junction_3	7.54819227441712	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTAAGACATGCTTG	NA	False	NA	NA	False	AATGAA	-35	NA	112278562	112498457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112278934_112358590_112358847_112438622_112438688_112441094_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.8	chr7	+	1831	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	87	625	48	174	multi-exon	FALSE	canonical	2	15	junction_1	4.44804720826366	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCATGCTATCATTG	NA	False	NA	NA	False	NA	NA	NA	112278611	112498041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ES.31709.9	chr7	+	1470	11	ISM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	140	5015	-52	-4216	5prime_fragment	FALSE	canonical	2	15	junction_1	4.65725240887801	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCACCATATTATTG	NA	False	NA	NA	False	AATATA	-19	NA	112278664	112493651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518
ES.3171.1	chr10	+	2026	1	Intergenic	novelGene_2488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAATGTTCTAG	NA	False	NA	NA	False	NA	NA	NA	76939629	76941655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76939600_76941700
ES.31710.1	chr7	-	10513	1	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	112292445	112281932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112281900_112292400
ES.31710.2	chr7	-	6595	2	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTTGGGCTGAGGAT	NA	False	NA	NA	False	AAGAAA	-37	NA	112293556	112286398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112292496_112293058
ES.31710.3	chr7	-	6554	2	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-5	NA	112293556	112286430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112292487_112293058
ES.31711.1	chr7	-	1300	1	Intergenic	novelGene_25999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112416636	112415336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112415300_112416600
ES.31712.1	chr7	-	211	1	Intergenic	novelGene_26000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACACACCCCTGG	NA	False	NA	NA	False	NA	NA	NA	112423675	112423464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112423500_112423700
ES.31713.1	chr7	-	1712	1	Intergenic	novelGene_26001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAACAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	112433492	112431780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112431800_112433500
ES.31714.1	chr7	-	3168	1	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGAGGCTGCAGTAAGT	NA	False	NA	NA	False	NA	NA	NA	112455500	112452332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112452300_112455500
ES.31714.2	chr7	-	3055	2	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGAGGCTGCAGTAAGT	NA	False	NA	NA	False	NA	NA	NA	112455500	112452332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112454163_112454275
ES.31714.3	chr7	-	2947	2	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112455412	112452361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112454148_112454251
ES.31714.4	chr7	-	3423	2	Antisense	novelGene_ENSMUSG00000055320.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112455898	112452361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112454148_112454261
ES.31715.1	chr7	+	3500	1	FSM	ENSMUSG00000098132.2	ENSMUST00000182858.2	3496	1	-13	9	-13	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTGATACTTTTTGA	NA	False	NA	NA	False	AATGAA	-13	NA	112553155	112556655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112553200_112556700
ES.31716.1	chr7	-	188	1	Intergenic	novelGene_26003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAAGTGTGCTGGTTG	1580	False	NA	NA	False	NA	NA	NA	112686935	112686747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112686700_112686900
ES.31717.1	chr7	+	2837	20	NNC	ENSMUSG00000055116.9	novel	2464	20	NA	NA	-190	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3594655518367	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3557	False	NA	NA	False	AATAAA	-18	NA	112806481	112913331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112806596_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.10	chr7	+	2838	21	NIC	ENSMUSG00000055116.9	novel	2976	21	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	27.1497697964458	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3836	False	NA	NA	False	AATAAA	-18	NA	112806760	112913331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112880608_112880630_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.11	chr7	+	2159	1	FSM	ENSMUSG00000055116.9	ENSMUST00000209495.2	3995	1	1853	-17	1853	17	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAAACACAAACAGAGGC	NA	False	NA	NA	False	NA	NA	NA	112840813	112842972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112840800_112843000
ES.31717.13	chr7	+	1740	10	NNC	ENSMUSG00000055116.9	novel	846	3	NA	NA	-10199	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.2331271928444	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACTGTTCCCAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	112894427	112913329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112894457_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.14	chr7	+	4151	8	NIC	ENSMUSG00000055116.9	novel	2554	17	NA	NA	-9922	-2	intron_retention	FALSE	canonical	3	70	junction_1	11.584648532979	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	112894704	112913331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112907917_112912000_112912104_112912665
ES.31717.15	chr7	+	1612	9	NNC	ENSMUSG00000055116.9	novel	846	3	NA	NA	-6599	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.165305667218	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACTGTTCCCAATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	112898027	112913330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112898078_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.16	chr7	+	2784	8	ISM	ENSMUSG00000055116.9	ENSMUST00000211770.2	2464	20	64600	-1538	-6197	1252	3prime_fragment	FALSE	canonical	3	77	junction_6	13.3889994444114	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCATTTGAGCCGG	NA	False	NA	NA	False	AATATA	-14	NA	112898429	112914585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.2	chr7	+	2888	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	20	0	20	0	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	3767	False	NA	NA	False	AATAAA	-20	NA	112806691	112913333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.3	chr7	+	2932	21	NNC	ENSMUSG00000055116.9	novel	2976	21	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.4048809521224	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3781	False	NA	NA	False	AATAAA	-18	NA	112806705	112913331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112806852_112818614_112818675_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.5	chr7	+	2880	21	NNC	ENSMUSG00000055116.9	novel	2976	21	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	32.9710099936293	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACTGTTCCCAATTG	3795	False	NA	NA	False	AATAAA	-16	NA	112806719	112913329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890695_112890761_112891005_112891061_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.6	chr7	+	3519	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	48	-659	-13	659	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3795	False	NA	NA	False	NA	NA	NA	112806719	112913992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.7	chr7	+	3161	23	NNC	ENSMUSG00000055116.9	novel	2976	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.7108397946337	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGTTCCCAATTGAT	3805	False	NA	NA	False	AATAAA	-18	NA	112806729	112913331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112806852_112833150_112833281_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112880608_112880630_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112887094_112887257_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ES.31717.8	chr7	+	2851	20	NNC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	24.3524444614198	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACTGTTCCCAATTG	3812	False	NA	NA	False	AATAAA	-16	NA	112806736	112913329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905209_112905334_112907822_112907917_112912000_112912104_112912665
ES.31718.1	chr7	-	130	1	Intergenic	novelGene_26004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	112856832	112856702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112856700_112856800
ES.31719.1	chr7	-	3049	1	Intergenic	novelGene_26005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCAGGCCCCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	112861896	112858847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112858800_112861900
ES.31719.2	chr7	-	1110	2	Antisense	novelGene_ENSMUSG00000055116.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCCGCT	NA	False	NA	NA	False	AGTAAA	-38	NA	112861897	112859144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_112860233_112861875
ES.3172.1	chr10	+	162	1	Intergenic	novelGene_2489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	76951388	76951550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76951400_76951600
ES.31720.1	chr7	-	127	1	Intergenic	novelGene_26006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	112880491	112880364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_112880400_112880500
ES.31721.1	chr7	+	3087	1	Intergenic	novelGene_26007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112964669	112967756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_112964700_112967800
ES.31722.1	chr7	-	2487	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTTGGCTAGATTCTG	NA	False	NA	3	True	AATAAA	-36	NA	112968608	112914830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
ES.31722.11	chr7	-	1823	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	6	-571	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGTTTGTGAAATTGGT	NA	False	NA	NA	False	TATAAA	-15	NA	112968537	112915423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
ES.31722.2	chr7	-	2887	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	-477	-16	-477	-1	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACACCTTGGCTAGATT	NA	False	NA	0	True	AATAAA	-33	NA	112969076	112914833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
ES.31722.3	chr7	-	2631	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	-51	1	2	-1	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACACCTTGGCTAGATT	NA	False	NA	0	True	AATAAA	-33	NA	112968597	112914833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ES.31722.4	chr7	-	1253	3	NNC	ENSMUSG00000038187.15	novel	2179	8	NA	NA	5475	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112925041	112914852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_112915938_112921886_112921998_112924984
ES.31722.5	chr7	-	2517	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	62.9638344166272	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968567	112914852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112968078_112968166_112968405
ES.31722.6	chr7	-	7172	4	NIC	ENSMUSG00000038187.15	novel	2384	8	NA	NA	-1495	0	intron_retention	FALSE	canonical	3	205	junction_3	4.49691252107735	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112932011	112914852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_112915947_112921886_112927667_112929061_112929165_112931816
ES.31722.7	chr7	-	3293	11	NNC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.702435266891	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112968549	112914852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_112915947_112921886_112922727_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ES.31722.8	chr7	-	3046	11	NNC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	-459	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	80.4484928385859	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	False	NA	-19	True	AATAAA	-14	NA	112969058	112914852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931815_112932103_112934528_112934726_112950987_112951118_112964111_112964177_112968078_112968166_112968405
ES.31722.9	chr7	-	2339	9	NNC	ENSMUSG00000038187.15	novel	2394	9	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.3461300751135	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTGACCAACTTT	NA	False	NA	-20	True	AATAAA	-13	NA	112968607	112914853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927599_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968161_112968405
ES.31723.1	chr7	+	5385	15	NNC	ENSMUSG00000030759.17	novel	1674	5	NA	NA	-23031	429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	172.7114498172	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTGTATTTTTACATT	NA	False	NA	NA	False	AATAAA	-26	NA	113090009	113170094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113090745_113090833_113090935_113091730_113092046_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.12	chr7	+	3960	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-38	1040	-38	13	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTCTGAACCATTTAG	NA	False	NA	15	True	AATAAA	-29	NA	113113002	113169678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.13	chr7	+	4360	13	FSM	ENSMUSG00000030759.17	ENSMUST00000067929.15	4935	13	-52	627	-25	426	multi-exon	FALSE	canonical	0	0	junction_10	154.7915040376	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTATTGTATTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	113113015	113170091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113153323_113153496_113160582_113160713_113165591_113165720_113167301
ES.31723.14	chr7	+	3088	6	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	166.870488703066	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGCAAAACTGTATT	NA	False	NA	2	True	AATAAA	-16	NA	113113021	113169665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113167301
ES.31723.17	chr7	+	4727	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-11	-6	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTTTGATGTACTCCT	NA	False	NA	8	True	AATAAA	-16	NA	113113029	113170712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
ES.31723.2	chr7	+	6252	13	NNC	ENSMUSG00000030759.17	novel	1674	5	NA	NA	-23018	424	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	121.801637463906	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATCTATTGTATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	113090022	113170089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113092046_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.21	chr7	+	2238	9	ISM	ENSMUSG00000030759.17	ENSMUST00000067929.15	4935	13	-9	18368	-9	0	5prime_fragment	FALSE	canonical	3	366	junction_6	25.4162226737177	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAGATACCAAGTT	NA	False	NA	NA	False	ATTAAA	-6	NA	113113058	113152350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141
ES.31723.22	chr7	+	2844	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	18	2100	-9	-1047	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAATTGATGTATATTT	NA	False	NA	NA	False	NA	NA	NA	113113058	113168618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.24	chr7	+	3238	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-8	-648	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCTGTGTATTCTTTG	NA	False	NA	NA	False	AGTAAA	-36	NA	113113059	113169017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.25	chr7	+	1755	6	FSM	ENSMUSG00000030759.17	ENSMUST00000123845.8	1218	6	-8	-529	-8	529	multi-exon	FALSE	canonical	3	399	junction_2	17.7538728169377	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTCTCTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	113113059	113150241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172
ES.31723.29	chr7	+	3347	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	29	1586	1	-533	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGCCCATATAATAT	NA	False	NA	NA	False	AATAAA	-15	NA	113113069	113169132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.3	chr7	+	3788	3	Intergenic	novelGene_26008	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTCTGTGTTGGAAC	NA	False	NA	NA	False	NA	NA	NA	113090443	113104141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113090745_113090833_113092042_113101862
ES.31723.31	chr7	+	4396	13	FSM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	1	-425	1	425	multi-exon	FALSE	canonical	2	13	junction_1	119.775136540658	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCTATTGTATTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	113113069	113170090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113236_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.34	chr7	+	2423	5	ISM	ENSMUSG00000030759.17	ENSMUST00000123845.8	1218	6	7	1172	6	-707	5prime_fragment	FALSE	canonical	3	399	junction_2	10.6183802907977	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTTGAGGCTTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	113113074	113148540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608
ES.31723.36	chr7	+	3808	12	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	124.824306278932	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGCAAAACTGTATTC	NA	False	NA	3	True	AATAAA	-17	NA	113113074	113169666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.38	chr7	+	3936	10	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	7	421	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	135.208480996324	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGCATCTATTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	113113075	113170086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113160582_113160713_113165591_113165720_113167301
ES.31723.39	chr7	+	4871	14	NNC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	118.97908920747	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAGTTTGATGTACT	NA	False	NA	5	True	AATAAA	-13	NA	113113075	113170709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301_113169877_113169923
ES.31723.4	chr7	+	4707	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-308	563	-308	490	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCCTTGGATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	113112732	113170155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.40	chr7	+	2981	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	7	-653	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAAGTATCTGTGTATT	NA	False	NA	NA	False	AGTAAA	-31	NA	113113075	113169012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
ES.31723.47	chr7	+	4195	14	NNC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-5	421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	118.97908920747	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGCATCTATTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	113113078	113170086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301_113168933_113169029
ES.31723.48	chr7	+	4017	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	41	904	-2	149	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGACCGGGTCATA	NA	False	NA	NA	False	NA	NA	NA	113113081	113169814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.49	chr7	+	4329	14	NNC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	3	423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.713551302292	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCATCTATTGTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	113113090	113170088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113113145_113125194_113125246_113138033_113138081_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.5	chr7	+	3961	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-192	1193	-192	-140	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGCATTCAAGTCATAT	NA	False	NA	NA	False	AGTAAA	-29	NA	113112848	113169525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.50	chr7	+	3618	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTGGCAAAACTGTAT	NA	False	NA	1	True	AATAAA	-15	NA	113113090	113169664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
ES.31723.52	chr7	+	3332	14	NNC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	8	421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.97908920747	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGCATCTATTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	113113095	113170086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301_113167405_113168347
ES.31723.54	chr7	+	4828	13	NNC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.694824961363	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAGTTTGATGTACTCC	NA	False	NA	7	True	AATAAA	-15	NA	113113095	113170711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_113113145_113125194_113125246_113138551_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.58	chr7	+	1995	13	NIC	ENSMUSG00000030759.17	novel	1674	5	NA	NA	6	173	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	122.563220647777	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAATTATGGTCCATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	113113310	113167585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113581_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.59	chr7	+	2292	9	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-8100	1117	combination_of_known_splicesites	FALSE	canonical	2	15	junction_6	135.948519668292	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAACTGTTGAATGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	113138565	113168529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
ES.31723.6	chr7	+	5157	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-187	-8	-187	8	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTTTGCAAATTGATGA	NA	False	NA	22	True	AATAAA	-30	NA	113112853	113170726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.60	chr7	+	4795	4	ISM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	38205	-426	4608	426	3prime_fragment	FALSE	canonical	2	280	junction_2	75.8961278473561	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTATTGTATTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	113151273	113170091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.61	chr7	+	4945	3	FSM	ENSMUSG00000030759.17	ENSMUST00000155183.2	775	3	-1435	-2735	-1435	427	multi-exon	FALSE	canonical	2	280	junction_1	80.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113158686	113170092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113160713_113165591_113165720_113167301
ES.31723.62	chr7	+	4987	2	FSM	ENSMUSG00000030759.17	ENSMUST00000151133.2	524	2	-4296	-167	889	167	multi-exon	FALSE	canonical	3	441	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTGGAGTAAATTATGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	113161010	113167579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113165720_113167301
ES.31723.63	chr7	+	6715	2	FSM	ENSMUSG00000030759.17	ENSMUST00000151133.2	524	2	-2886	-3305	2299	-1	multi-exon	FALSE	canonical	3	441	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGTACTCCTTTGCA	NA	False	NA	13	True	AATAAA	-21	NA	113162420	113170717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113165720_113167301
ES.31723.7	chr7	+	2485	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	-186	2663	-186	643	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTATAAGTAATTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	113112854	113168055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ES.31723.8	chr7	+	4274	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-178	427	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113112862	113170092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
ES.31723.9	chr7	+	5722	12	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	-178	0	intron_retention	FALSE	canonical	2	61	junction_2	109.399261181726	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGCAAAACTGTATT	NA	False	NA	2	True	AATAAA	-16	NA	113112862	113169665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113153021_113160582_113160713_113165591_113165720_113167301
ES.31724.1	chr7	-	3376	1	Intergenic	novelGene_26009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAACAGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	113136044	113132668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_113132700_113136000
ES.31725.1	chr7	+	3238	2	Intergenic	novelGene_26010	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTGTGTTTTATGATA	9689	False	NA	NA	False	AATAAA	-44	NA	113249355	113265621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113249388_113262415
ES.31726.1	chr7	+	93	1	Intergenic	novelGene_26011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTTACTT	NA	False	NA	NA	False	NA	NA	NA	113668650	113668743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113668600_113668700
ES.31727.1	chr7	+	3282	2	Antisense	novelGene_ENSMUSG00000055723.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCACACACACACAAACAG	NA	False	NA	NA	False	NA	NA	NA	113716422	113725953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_113719197_113725445
ES.31728.1	chr7	-	2278	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	-4	1	-4	-1	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACGCTTGACGGCTCCTT	NA	False	NA	-2	True	ATTAAA	-20	NA	113717020	113646017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ES.31728.3	chr7	-	1741	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	-5	539	-5	-536	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATGATTAATGTTTT	NA	False	NA	NA	False	TATAAA	-24	NA	113717021	113646555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ES.31728.4	chr7	-	1510	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	-2	767	-2	-764	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGACAATATTCTCT	NA	False	NA	9	True	ATTAAA	-35	NA	113717018	113646783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ES.31728.5	chr7	-	1163	3	NIC	ENSMUSG00000055723.7	novel	2275	6	NA	NA	4	-788	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	102	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTGTTATCATGCT	NA	False	NA	-15	True	ATTAAA	-11	NA	113716995	113646807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113647487_113649535_113649655_113716630
ES.31728.6	chr7	-	1164	6	NNC	ENSMUSG00000055723.7	novel	2275	6	NA	NA	50843	-789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	104.319509201299	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCCTTTGTTATCATGC	NA	False	NA	-16	True	ATTAAA	-10	NA	113666156	113646808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113666089
ES.31728.7	chr7	-	1374	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	2	899	2	-896	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACACAAGTGAGACATCT	NA	False	NA	89	True	AATACA	-11	NA	113717014	113646915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ES.31729.1	chr7	+	159	1	Intergenic	novelGene_26012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	113732546	113732705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113732500_113732700
ES.3173.1	chr10	+	2315	1	Intergenic	novelGene_2490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76987853	76990168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76987900_76990200
ES.31730.1	chr7	-	215	1	Intergenic	novelGene_26013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATTTTTATTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	113800865	113800650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_113800600_113800900
ES.31731.1	chr7	-	223	1	Intergenic	novelGene_26014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTCTTCCAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	113804449	113804226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_113804200_113804400
ES.31732.1	chr7	-	3452	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	-100	-6	-100	6	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGATTTTTTTTTTT	NA	False	NA	-1	True	AATAAA	-22	NA	113854046	113814787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.10	chr7	-	3329	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	108.60701171286	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTATCTGTGGGATT	NA	False	NA	-10	True	AATAAA	-13	NA	113853950	113814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815836_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.12	chr7	-	6511	20	NIC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	8	-3	intron_retention	FALSE	canonical	3	435	junction_12	33.8189738414658	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTATCTGTGGGATT	NA	False	NA	-10	True	AATAAA	-13	NA	113853938	113814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.18	chr7	-	3319	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	147.268508532687	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTATCTGTGGGATT	NA	False	NA	-10	True	AATAAA	-13	NA	113853934	113814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836531_113836676_113836761_113836870_113837593_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.20	chr7	-	3447	23	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	142.960752864218	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTGTATCTGTGGGAT	NA	False	NA	-11	True	AATAAA	-12	NA	113853929	113814797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113852562_113852685_113853104_113853255_113853840
ES.31732.21	chr7	-	3359	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	108.539719680398	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTGTATCTGTGGGAT	NA	False	NA	-11	True	AATAAA	-12	NA	113853938	113814797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849536_113853104_113853255_113853840
ES.31732.22	chr7	-	3246	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_19	106.438446329993	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTATTTTATAAATA	NA	False	NA	-6	True	AATAAA	-17	NA	113853946	113814830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848150_113849280_113849511_113853104_113853255_113853840
ES.31732.23	chr7	-	3184	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	-4	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.983831829158	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTGTCTTTTATCTTAA	NA	False	NA	-110	True	TTTAAA	-5	NA	113853930	113814934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815702_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.24	chr7	-	5071	19	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	8	-813	intron_retention	FALSE	canonical	0	0	junction_11	116.356200660295	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTTATTTCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	113853918	113815641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836503_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.25	chr7	-	170	1	Intergenic	novelGene_26015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113831093	113830923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_113830900_113831100
ES.31732.26	chr7	-	1932	7	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	-4	24140	-4	12105	5prime_fragment	FALSE	canonical	3	440	junction_3	32.4276973520408	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTCCCTTCGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	113853950	113838933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.4	chr7	-	3275	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.850110145996	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATCTGTGGGATTT	NA	False	NA	-9	True	AATAAA	-14	NA	113853946	113814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820929_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ES.31732.5	chr7	-	3614	22	NNC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_21	106.04183489689	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATCTGTGGGATTT	NA	False	NA	-9	True	AATAAA	-14	NA	113853909	113814795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853533
ES.31732.6	chr7	-	5303	21	NIC	ENSMUSG00000030754.10	novel	3346	22	NA	NA	5	-3	intron_retention	FALSE	canonical	3	435	junction_12	33.6251022303279	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTATCTGTGGGATT	NA	False	NA	-10	True	AATAAA	-13	NA	113853941	113814796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113848213_113849280_113849511_113853104_113853255_113853840
ES.31733.1	chr7	+	177	1	Intergenic	novelGene_26016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	113855032	113855209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113855000_113855200
ES.31733.2	chr7	+	327	1	Intergenic	novelGene_26017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAATAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	113855034	113855361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113855000_113855400
ES.31733.3	chr7	+	173	2	Antisense	novelGene_ENSMUSG00000030751.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAAAAGTCTACT	NA	False	NA	NA	False	NA	NA	NA	113855034	113878406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_113855188_113878386
ES.31734.1	chr7	-	7593	8	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-6	2453	intron_retention	TRUE	canonical	3	2548	junction_4	205.676881520108	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGGACAGAAACCACGC	NA	False	NA	NA	False	NA	NA	NA	113875295	113861387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113865780_113866355_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.10	chr7	-	1640	9	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	2548	junction_5	200.640848283693	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875312	113863842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.11	chr7	-	970	8	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1000.65833431837	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875284	113863842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.17	chr7	-	1009	8	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	939.521610790756	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTGTCAAGTTTTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	113875311	113863843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113875235
ES.31734.19	chr7	-	1784	9	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	2548	junction_5	205.567963214116	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTGTCAAGTTTTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	113875289	113863843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.2	chr7	-	4919	1	Genic_Genomic	ENSMUSG00000030751.19	novel	NA	NA	NA	NA	8955	2453	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGGACAGAAACCACGC	NA	False	NA	NA	False	NA	NA	NA	113866306	113861387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_113861400_113866300
ES.31734.20	chr7	-	1179	10	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	885.170095950734	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCAAGTTTTTG	NA	False	NA	-4	True	AATAAA	-13	NA	113875343	113863844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869631_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.21	chr7	-	2263	8	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	1	-5	intron_retention	FALSE	canonical	3	2548	junction_4	210.497273238435	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTGTGTCAAGTTTTT	NA	False	NA	-5	True	AATAAA	-12	NA	113875288	113863845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.22	chr7	-	3734	7	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	2	-5	intron_retention	FALSE	canonical	3	170	junction_5	929.770655711516	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTGTGTCAAGTTTTT	NA	False	NA	-5	True	AATAAA	-12	NA	113875287	113863845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113865780_113866355_113866436_113868955_113870378_113873046_113873151_113873260_113873358_113873650_113873696_113875235
ES.31734.24	chr7	-	4346	6	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-18	-7	intron_retention	FALSE	canonical	3	2548	junction_2	226.24977348055	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTATTGTGTCAAGTTT	NA	False	NA	-7	True	AATAAA	-10	NA	113875320	113863847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113866436_113868955_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.25	chr7	-	1011	1	FSM	ENSMUSG00000030751.19	ENSMUST00000210966.2	956	1	-29	-26	22	26	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAGAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	113875331	113874320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113874300_113875300
ES.31734.3	chr7	-	1289	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	62	-150	-2	150	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTATGTAGACTGG	NA	False	NA	NA	False	AATAAA	-15	NA	113875291	113863690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.4	chr7	-	1242	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	-42	1	-42	-1	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCAAGTTTTTGTTT	NA	False	NA	-1	True	AATAAA	-16	NA	113875395	113863841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.6	chr7	-	1208	11	NNC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1113.93915453224	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875296	113863842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113874858_113874925_113875235
ES.31734.7	chr7	-	3208	8	NIC	ENSMUSG00000030751.19	novel	1201	10	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	2548	junction_4	202.831889776248	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875309	113863842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ES.31734.9	chr7	-	1171	10	NNC	ENSMUSG00000030751.19	novel	960	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_9	1082.98922170121	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCAAGTTTTTGTT	NA	False	NA	-2	True	AATAAA	-15	NA	113875290	113863842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873358_113873650_113873696_113875195
ES.31735.1	chr7	+	776	2	Antisense	novelGene_ENSMUSG00000087475.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGCTTAATTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	113928123	113929064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_113928723_113928887
ES.31736.1	chr7	+	136	1	Intergenic	novelGene_26018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113996938	113997074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_113996900_113997100
ES.31737.1	chr7	+	5250	15	NIC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-105	-1314	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	19.7907420120559	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTGCGTTTATATAA	NA	False	NA	9	True	AATAAA	-19	NA	114014410	114137172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.10	chr7	+	5196	15	NIC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-50	-1315	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	20.7626283185409	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTTGCGTTTATATA	NA	False	NA	8	True	AATAAA	-18	NA	114014465	114137171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.11	chr7	+	4327	16	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-49	-2244	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	17.7531217912043	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTATTCTTATTCT	NA	False	NA	NA	False	AATGAA	-23	NA	114014466	114136242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097236_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.12	chr7	+	4375	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-46	2244	-46	-2244	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTATTCTTATTCT	NA	False	NA	NA	False	AATGAA	-23	NA	114014469	114136242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.13	chr7	+	4088	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-43	2528	-43	-2528	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGAGTGATTTCTG	NA	False	NA	NA	False	AATACA	-18	NA	114014472	114135958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.14	chr7	+	5472	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-19	1120	-19	-1120	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCATTTTTAAATTCTG	NA	False	NA	NA	False	TTTAAA	-14	NA	114014496	114137366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.15	chr7	+	4750	16	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	25	-1321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.6814370192121	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTATTGAACTTGCGTT	NA	False	NA	2	True	AATAAA	-12	NA	114014540	114137165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114014633_114014995_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.16	chr7	+	4332	17	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	733	-1316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	20.1338295848058	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAACTTGCGTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	114015248	114137170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265_114135660_114135851
ES.31737.17	chr7	+	3548	11	NIC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-8265	-1316	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	22.6132704401641	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAACTTGCGTTTATAT	8914	False	NA	7	True	AATAAA	-17	NA	114097147	114137170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.18	chr7	+	2780	11	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	1695	-1296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.1538816756231	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTGTGTAAATTTCT	NA	False	NA	27	True	AATAAA	-37	NA	114108071	114137190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265_114135359_114135917
ES.31737.19	chr7	+	2977	5	ISM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	111628	950	5175	-950	3prime_fragment	FALSE	canonical	3	54	junction_3	7.36121593216773	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCATGATTGCAAGTC	5921	False	NA	NA	False	ATTAAA	-29	NA	114126143	114137536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.2	chr7	+	5372	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-103	1304	-103	-1304	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATATAATCCAGTGTGT	NA	False	NA	19	True	AATAAA	-29	NA	114014412	114137182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.3	chr7	+	4149	16	NNC	ENSMUSG00000030671.10	novel	719	4	NA	NA	-102	-1315	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	18.5021320092818	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTTGCGTTTATATA	NA	False	NA	8	True	AATAAA	-18	NA	114014413	114137171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114014487_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.4	chr7	+	5285	16	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-81	-1318	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	17.7531217912043	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGAACTTGCGTTTAT	NA	False	NA	5	True	AATAAA	-15	NA	114014434	114137168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097236_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.5	chr7	+	5242	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-80	1411	-80	-1411	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCCTTCCTGTCACTT	NA	False	NA	-88	True	ATTAAA	-13	NA	114014435	114137075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.6	chr7	+	5408	17	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-71	-1318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.5975462691251	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTGAACTTGCGTTTAT	NA	False	NA	5	True	AATAAA	-15	NA	114014444	114137168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114015698_114090047_114090130_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.8	chr7	+	4053	16	NNC	ENSMUSG00000030671.10	novel	719	4	NA	NA	-58	-1316	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	22.5737310459156	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAACTTGCGTTTATAT	NA	False	NA	7	True	AATAAA	-17	NA	114014457	114137170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114014487_114090674_114090726_114093720_114093970_114097146_114097236_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31737.9	chr7	+	4861	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-53	1765	-53	-1765	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAGGACACATTTA	NA	False	NA	NA	False	AATAAA	-36	NA	114014462	114136721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ES.31738.1	chr7	-	3002	1	Genic_Genomic	ENSMUSG00000087475.4	novel	NA	NA	NA	NA	-1393	-58913	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTATTGTATTGTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	114015789	114012787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_114012800_114015800
ES.31739.1	chr7	+	198	1	Intergenic	novelGene_26019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGTCAGATGCTGT	9779	False	NA	NA	False	NA	NA	NA	114191170	114191368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_114191200_114191400
ES.3174.1	chr10	+	202	1	Intergenic	novelGene_2491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAACTACCAATAG	NA	False	NA	NA	False	NA	NA	NA	76997107	76997309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_76997100_76997300
ES.31740.1	chr7	-	2114	5	NNC	ENSMUSG00000030669.14	novel	404	4	NA	NA	-2	6840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.9234426179903	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATACCTTCTGACAGTG	2082	False	NA	NA	False	AATAAA	-24	NA	114235544	114223872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_114225469_114231650_114231835_114233702_114233844_114234361_114234457_114235446
ES.31740.2	chr7	-	3867	4	NNC	ENSMUSG00000030669.14	novel	720	4	NA	NA	0	6704	intron_retention	FALSE	canonical	0	0	junction_1	43.8710230866191	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGATAGTTTCTCCA	2085	False	NA	NA	False	AATAAA	-21	NA	114235541	114224008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_114225469_114231650_114233844_114234361_114234457_114235422
ES.31740.3	chr7	-	3324	3	FSM	ENSMUSG00000030669.14	ENSMUST00000205933.2	458	3	-5	-2861	1	-2	multi-exon	FALSE	canonical	3	87	junction_2	4	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGAGTCTTTGCTGTTA	2080	False	NA	-2	True	ATTAAA	-25	NA	114235546	114230714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_114233844_114234361_114234457_114235446
ES.31740.4	chr7	-	988	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	4	2	4	-2	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGAGTCTTTGCTGTTA	2038	False	NA	-2	True	ATTAAA	-25	NA	114235588	114230714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
ES.31740.5	chr7	-	2846	4	NIC	ENSMUSG00000030669.14	novel	994	5	NA	NA	14	-2	intron_retention	FALSE	canonical	3	87	junction_3	3.77123616632825	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGAGTCTTTGCTGTTA	2048	False	NA	-2	True	ATTAAA	-25	NA	114235578	114230714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_114231141_114231650_114233844_114234361_114234457_114235446
ES.31740.6	chr7	-	832	4	FSM	ENSMUSG00000030669.14	ENSMUST00000032907.9	830	4	-7	5	-7	-5	multi-exon	FALSE	canonical	3	6	junction_1	40.2022663816634	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTGAACCATGGT	2072	False	NA	NA	False	AATAAA	-11	NA	114235554	114232532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_114233021_114233702_114233844_114234361_114234457_114235446
ES.31741.1	chr7	-	1044	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071641.5	1019	1	-6	-19	-6	19	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTCTCAGACATGCTGG	NA	False	NA	NA	False	AATAAA	-34	NA	114305476	114304432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_114304400_114305500
ES.31742.1	chr7	+	2216	14	NNC	ENSMUSG00000048782.16	novel	1826	10	NA	NA	-4390	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.03774904332554	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTCCATTTTTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	114338538	114449607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114338611_114338700_114338773_114368166_114368268_114390186_114390533_114391480_114391534_114393204_114393329_114403713_114403828_114410837_114410964_114428268_114428441_114433987_114434167_114441357_114441425_114444251_114444408_114445686_114445764_114449050
ES.31743.1	chr7	+	3225	10	Fusion	ENSMUSG00000108722.2_ENSMUSG00000108379.2	novel	1808	4	NA	NA	-23	-32917	multi-exon	FALSE	canonical	0	0	junction_1	0.415739709641549	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTTATAATCTACC	NA	False	NA	NA	False	AAAACA	-5	NA	114547861	114632824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_114547924_114556742_114556874_114557261_114557363_114558685_114558751_114573227_114573369_114574224_114574392_114581901_114582168_114619613_114619701_114622985_114623065_114630698
ES.31743.2	chr7	+	3431	4	NNC	ENSMUSG00000108379.2	novel	1808	4	NA	NA	4889	-1	intron_retention	FALSE	canonical	0	0	junction_2	1.24721912892465	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCATATAATGTGTT	NA	False	NA	NA	False	AATATA	-22	NA	114555430	114583194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_114557363_114558685_114558751_114573227_114573369_114581901
ES.31744.1	chr7	-	8805	16	NNC	ENSMUSG00000051910.14	novel	8193	16	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.4	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTGTTTGGCTTAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	115633741	115070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115076457_115085782_115086000_115088897_115089072_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149392_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376491_115400603_115400845_115543128_115543198_115633349
ES.31745.1	chr7	+	192	1	Intergenic	novelGene_26020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAGAGGACT	NA	False	NA	NA	False	NA	NA	NA	115683221	115683413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115683200_115683400
ES.31746.1	chr7	-	179	1	Intergenic	novelGene_26021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTATAA	NA	False	NA	NA	False	NA	NA	NA	115685476	115685297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115685300_115685500
ES.31747.1	chr7	+	1572	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	-6	-87	-6	87	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTCTCTAGAGTCTAC	NA	False	NA	116	True	NA	NA	NA	115692529	115704532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.12	chr7	+	1640	6	NNC	ENSMUSG00000030663.13	novel	703	5	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	837.090102677125	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	False	NA	26	True	AATAAA	-17	NA	115692821	115704442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_115693019_115696996_115697189_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.13	chr7	+	1169	3	ISM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	8641	3	8576	0	3prime_fragment	FALSE	canonical	3	1694	junction_1	36.5	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	False	NA	26	True	AATAAA	-17	NA	115701176	115704442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_115701240_115702445_115702556_115703446
ES.31747.2	chr7	+	942	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	13	524	13	-145	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCATCTGCCCTCTCCC	NA	False	NA	17	True	AATAAA	-27	NA	115692548	115703921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.3	chr7	+	652	3	FSM	ENSMUSG00000030663.13	ENSMUST00000106607.2	1153	3	-25	526	15	-150	multi-exon	FALSE	canonical	3	76	junction_1	845.5	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGCATCATCTGCCCT	NA	False	NA	12	True	AATAAA	-22	NA	115692550	115703916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115692623_115702445_115702556_115703446
ES.31747.4	chr7	+	2667	4	NIC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	17	-1	intron_retention	FALSE	canonical	3	1664	junction_2	82.8774195222478	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTGATGCCTTTA	NA	False	NA	28	True	AATAAA	-19	NA	115692552	115704444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_115692761_115698674_115698759_115701178_115702556_115703446
ES.31747.5	chr7	+	1393	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	17	69	17	-66	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTACTATGTGACCAAAG	NA	False	NA	-40	True	NA	NA	NA	115692552	115704376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.6	chr7	+	725	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	29	725	-6	-346	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACAGTGGAGGACTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	115692564	115703720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.7	chr7	+	7361	4	NIC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1664	junction_1	43.2537731173696	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692567	115704445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_115698759_115701178_115701240_115702445_115702556_115703446
ES.31747.9	chr7	+	1447	5	NNC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	758.133357332336	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTGATGCCTTTA	NA	False	NA	28	True	AATAAA	-19	NA	115692586	115704444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703426
ES.31748.1	chr7	+	264	1	Intergenic	novelGene_26023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAACAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	115770421	115770685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115770400_115770700
ES.31749.1	chr7	+	5634	1	Intergenic	novelGene_26025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	115810624	115816258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115810600_115816300
ES.31749.2	chr7	+	4330	1	Intergenic	novelGene_26024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	115810624	115814954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115810600_115815000
ES.3175.1	chr10	-	3649	2	Antisense	novelGene_ENSMUSG00000001436.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAACGGTAAGTGGCTG	5941	False	NA	NA	False	NA	NA	NA	76878523	76871638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_76874412_76877647
ES.3175.2	chr10	-	7147	1	Antisense	novelGene_ENSMUSG00000001436.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	5653	False	NA	NA	False	NA	NA	NA	76878811	76871664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_76871700_76878800
ES.31750.1	chr7	+	2047	4	Antisense	novelGene_ENSMUSG00000045659.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	1.24721912892465	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	115906830	115909969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_115907538_115908121_115908340_115908760_115909186_115909272
ES.31750.2	chr7	+	2143	2	Intergenic	novelGene_26027	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTTGTTCATTGTTGC	NA	False	NA	NA	False	NA	NA	NA	115907768	115909987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115909176_115909251
ES.31750.3	chr7	+	173	1	Intergenic	novelGene_26028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	115908343	115908516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115908300_115908500
ES.31751.1	chr7	-	6258	29	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	8	24854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.6550256744786	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAAAATTCACTGTATCT	NA	False	NA	NA	False	NA	NA	NA	115907582	115697865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115699722_115703316_115703592_115723720_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.10	chr7	-	5245	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	1	-2	intron_retention	FALSE	canonical	3	186	junction_4	27.1934109666294	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115907589	115722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.12	chr7	-	4964	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.9039065775469	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115907581	115722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115723560_115723720_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.15	chr7	-	5072	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.9411276550054	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGCTCTTGCTGGCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	115907588	115722722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739680_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.16	chr7	-	5491	25	NNC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	588	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	57.7912310726194	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGCTCTTGCTGGCT	NA	False	NA	-2	True	ATTAAA	-17	NA	115906697	115722723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115906098
ES.31751.17	chr7	-	5293	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	71.9149207738142	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGGCTCTTGCTGGCT	NA	False	NA	-2	True	ATTAAA	-17	NA	115907599	115722723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.19	chr7	-	5069	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	56.9476953001612	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGGCTCTTGCTGGC	NA	False	NA	-3	True	ATTAAA	-16	NA	115907582	115722724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.2	chr7	-	5652	27	NNC	ENSMUSG00000045659.19	novel	6059	23	NA	NA	-2	24848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.6875396386473	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAGTCTAAAATTCACT	NA	False	NA	NA	False	NA	NA	NA	115907592	115697871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115699722_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.20	chr7	-	12109	25	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	4	3	intron_retention	FALSE	non_canonical	0	0	junction_6	99.8905564299694	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGGCTCTTGCTGGC	NA	False	NA	-3	True	ATTAAA	-16	NA	115907586	115722724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115727929_115728626_115728761_115731855_115734475_115735152_115736340_115736424_115736614_115739511_115739605_115739850_115739960_115741932_115742035_115742520_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.21	chr7	-	7267	11	NIC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	12408	2	intron_retention	FALSE	canonical	3	219	junction_1	23.4554897625268	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCCTGGCTCTTGCTGG	NA	False	NA	-4	True	ATTAAA	-15	NA	115744719	115722725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524
ES.31751.23	chr7	-	6097	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-4	0	intron_retention	FALSE	canonical	3	186	junction_4	27.0686830119236	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907594	115722727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.24	chr7	-	5236	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	71.8477471145206	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907571	115722727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115786872_115787000_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.26	chr7	-	5239	28	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	71.3311603068885	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907581	115722727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756090_115756211_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.28	chr7	-	5144	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.9146115696268	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907605	115722727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736334_115736417_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.29	chr7	-	5164	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-385	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_26	55.6088542819955	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907996	115722727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907855
ES.31751.3	chr7	-	5758	29	NNC	ENSMUSG00000045659.19	novel	6059	23	NA	NA	1	24690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.2459703627308	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTGCTTATATTCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	115907589	115698029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115699722_115703419_115703592_115708015_115708111_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.30	chr7	-	4944	11	NNC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	-10838	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	113.233563928722	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTGTCCTGGCTCTTGC	NA	False	NA	-7	True	ATTAAA	-12	NA	115739598	115722728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115736804_115738315_115738370_115739349_115739511
ES.31751.32	chr7	-	5230	28	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	71.004607744763	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTGTCCTGGCTCTTGC	NA	False	NA	-7	True	ATTAAA	-12	NA	115907582	115722728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115726170_115726282_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.33	chr7	-	8046	26	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	86.6344042514289	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTGTCCTGGCTCTTGC	NA	False	NA	-7	True	ATTAAA	-12	NA	115907303	115722728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115738315_115738370_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115787402_115787576_115788504_115788589_115907159
ES.31751.35	chr7	-	5124	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	55.6707353034857	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGTGTCCTGGCTCTTGC	NA	False	NA	-7	True	ATTAAA	-12	NA	115907581	115722728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742681_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.38	chr7	-	5090	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-571	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	55.9467334368015	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGTGTCCTGGCTCTTG	NA	False	NA	-8	True	ATTAAA	-11	NA	115908182	115722729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115908113
ES.31751.39	chr7	-	5716	15	NIC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	1	-3	intron_retention	FALSE	canonical	3	219	junction_1	26.5944600645031	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115757126	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744474_115753867_115753922_115756716_115756804_115757091
ES.31751.4	chr7	-	4905	27	NNC	ENSMUSG00000045659.19	novel	6059	23	NA	NA	2	24105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.6875396386473	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATCTGTAACTCTAAG	NA	False	NA	NA	False	ATTAAA	-9	NA	115907588	115698614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115699722_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.40	chr7	-	8427	22	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	219	junction_1	24.5424339819757	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907301	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115734475_115735152_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159
ES.31751.41	chr7	-	5086	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.6707353034857	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907590	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742636_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.43	chr7	-	3884	22	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	91.2024982750471	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907622	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115779628_115779734_115780408_115780521_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.44	chr7	-	4949	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	56.3032361414511	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907590	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.45	chr7	-	4250	22	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.0634387410551	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907582	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115739878_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.46	chr7	-	4914	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	10	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	52.8538210539219	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCGTGTCCTGGCTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	115907580	115722730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.47	chr7	-	7368	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-7	-29	intron_retention	FALSE	canonical	3	219	junction_1	23.2201981042368	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907597	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.48	chr7	-	5388	29	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	93.1049166811511	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907581	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115786872_115787019_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.49	chr7	-	5081	27	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	1	-29	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	55.2567969526596	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907589	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774963_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.51	chr7	-	5203	25	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	57	-29	intron_retention	FALSE	canonical	3	186	junction_4	27.7156945109124	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907419	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306
ES.31751.52	chr7	-	5229	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-6	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	71.9149207738142	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907574	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788579_115803861_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.54	chr7	-	5177	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	1	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	54.424381609803	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907589	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757012_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.55	chr7	-	5330	28	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	71.6103041837899	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907581	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739050_115739291_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.56	chr7	-	5452	22	NIC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	-608	-29	intron_retention	FALSE	canonical	3	186	junction_4	26.801952749787	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115780519	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408
ES.31751.57	chr7	-	5015	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	0	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	57.0102587259521	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATGTATAGATTAAAATA	NA	False	NA	-35	True	AATAAA	-30	NA	115907590	115722756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115907159_115907218_115907306_115907384_115907485
ES.31751.6	chr7	-	5195	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	55.9467334368015	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCTTGCTGGCTGTA	NA	False	NA	1	True	ATTAAA	-20	NA	115907581	115722720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907090_115907218_115907306_115907384_115907485
ES.31751.63	chr7	-	5002	26	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-94	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	56.9721897069088	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAAGTGAT	NA	False	NA	-50	True	AATAAA	-15	NA	115907379	115722771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744259_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306
ES.31751.65	chr7	-	4996	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	10	-45	combination_of_known_splicesites	FALSE	canonical	1	1	junction_25	56.458041057054	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCAAAAAAAAAAAAAAGTGA	NA	False	NA	-51	True	AATAAA	-14	NA	115907580	115722772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907485
ES.31751.67	chr7	-	4990	27	NNC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	-463	-49	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	55.7777181870489	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTTGCAAAAAAAAAAAAAA	NA	False	NA	-55	True	AATAAA	-10	NA	115908074	115722776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115908058
ES.31751.69	chr7	-	4281	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	1	-394	intron_retention	FALSE	canonical	3	186	junction_4	27.1863495158876	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGGACTGAATGGCT	NA	False	NA	NA	False	AATATA	-37	NA	115907589	115723746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.7	chr7	-	5501	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	-346	-6	-346	-2	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115907957	115722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.71	chr7	-	4635	3	ISM	ENSMUSG00000045659.19	ENSMUST00000182443.8	6059	23	56386	-1515	-3416	-396	3prime_fragment	FALSE	canonical	3	228	junction_2	4.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGGAGGACTGAATGG	5759	False	NA	NA	False	AATATA	-35	NA	115732176	115723748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_115727929_115728626_115728761_115731855
ES.31751.72	chr7	-	4082	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	29	1038	8	-413	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTTTATAATGCTCA	NA	False	NA	NA	False	AATATA	-18	NA	115907582	115723765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.73	chr7	-	5144	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	-526	-1142	-505	0	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATTGGCGTGGTTCTTCC	NA	False	NA	0	True	AATAAA	-18	NA	115908116	115733025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.75	chr7	-	4761	24	NNC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	77.0075978869952	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGATTGGCGTGGTTCTTCC	NA	False	NA	0	True	AATAAA	-18	NA	115907581	115733025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115803865_115804018_115907159_115907218_115907306_115907384_115907485
ES.31751.77	chr7	-	1837	4	NNC	ENSMUSG00000045659.19	novel	4633	21	NA	NA	-7854	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.028189406392	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGATTGGCGTGGTTCTTC	1321	False	NA	-1	True	AATAAA	-17	NA	115736614	115733026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115734475_115735152_115735257_115736244_115736340_115736424
ES.31751.79	chr7	-	4798	24	NNC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	91.1150625932944	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGATTGGCGTGGTTCTTC	NA	False	NA	-1	True	AATAAA	-17	NA	115907575	115733026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115786872_115787000_115788504_115788589_115907090_115907218_115907306_115907384_115907485
ES.31751.8	chr7	-	5755	15	NNC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	12664	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	90.7238465152939	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115744463	115722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115736804_115738315_115738370_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404
ES.31751.80	chr7	-	4554	22	NIC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	59.6398868189171	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGATTGGCGTGGTTCTT	NA	False	NA	-2	True	AATAAA	-16	NA	115907605	115733027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907485
ES.31751.82	chr7	-	4718	24	NIC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	76.3225173462214	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGGATTGGCGTGGTTCT	NA	False	NA	-3	True	AATAAA	-15	NA	115907573	115733028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756090_115756211_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.84	chr7	-	4720	21	NNC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_9	81.1427137825695	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACGGATTGGCGTGGTTC	NA	False	NA	-4	True	AATAAA	-14	NA	115907581	115733029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744474_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775044_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.85	chr7	-	4478	23	NNC	ENSMUSG00000045659.19	novel	3476	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.8028116773086	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACGGATTGGCGTGGTT	NA	False	NA	-5	True	AATAAA	-13	NA	115907589	115733030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739605_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ES.31751.86	chr7	-	4541	10	ISM	ENSMUSG00000045659.19	ENSMUST00000182511.8	4502	21	42417	2	10705	-2	3prime_fragment	FALSE	canonical	3	242	junction_2	17.6823829464998	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTACGGATTGGCGTGGT	NA	False	NA	-6	True	AATAAA	-12	NA	115746422	115733031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404
ES.31751.87	chr7	-	1052	5	NIC	ENSMUSG00000045659.19	novel	623	8	NA	NA	339	351	intron_retention	FALSE	canonical	3	231	junction_4	17.7816619020833	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAGGTCCAGGA	NA	False	NA	NA	False	NA	NA	NA	115756788	115741581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115742035_115742524_115742675_115744150_115744474_115753867_115753922_115756716
ES.31751.88	chr7	-	3710	1	Intergenic	novelGene_26022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGGACTCAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	115753349	115749639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115749600_115753300
ES.31751.89	chr7	-	2240	12	NNC	ENSMUSG00000045659.19	novel	3354	10	NA	NA	-16	4037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.220583350833	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCACTTTGTAGCCCA	NA	False	NA	NA	False	AATAAA	-16	NA	115907301	115751266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115751585_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159
ES.31751.9	chr7	-	4142	18	NNC	ENSMUSG00000045659.19	novel	5257	25	NA	NA	-234	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.0204120199092	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGCTCTTGCTGGCTGT	NA	False	NA	0	True	ATTAAA	-19	NA	115763555	115722721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732087_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266
ES.31751.90	chr7	-	2431	1	Genic_Genomic	ENSMUSG00000045659.19	novel	NA	NA	NA	NA	-1013	-55151	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGGAAGACAGGCCTAG	8107	False	NA	NA	False	NA	NA	NA	115838060	115835629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_115835600_115838100
ES.31751.91	chr7	-	206	1	Intergenic	novelGene_26026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCCCCCCCCCACCCC	NA	False	NA	NA	False	AAAAAG	-11	NA	115900302	115900096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115900100_115900300
ES.31752.1	chr7	-	163	1	Intergenic	novelGene_26029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	115919246	115919083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115919100_115919200
ES.31753.1	chr7	+	178	1	Intergenic	novelGene_26030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115926970	115927148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115927000_115927100
ES.31754.1	chr7	-	1540	5	FSM	ENSMUSG00000090862.4	ENSMUST00000205906.2	1150	5	-390	0	-361	0	multi-exon	FALSE	canonical	3	42	junction_1	4265.5784118335	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933791	115930746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115930819_115931613_115931715_115932163_115933010_115933134_115933184_115933319
ES.31754.2	chr7	-	589	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	-7	7	-7	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933437	115930746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ES.31754.3	chr7	-	2050	3	NIC	ENSMUSG00000090862.4	novel	1150	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8384	junction_1	1440.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933370	115930746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115931715_115932163_115933010_115933134
ES.31754.5	chr7	-	2391	3	FSM	ENSMUSG00000090862.4	ENSMUST00000205548.2	2363	3	-28	0	3	0	multi-exon	FALSE	canonical	3	9102	junction_2	1081.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933398	115930746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115933010_115933134_115933184_115933319
ES.31754.6	chr7	-	1765	4	NIC	ENSMUSG00000090862.4	novel	1317	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	9102	junction_3	926.588365996466	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGGTGTTTTGTGGTT	NA	False	NA	-8	True	AATAAA	-12	NA	115933370	115930747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115932334_115932930_115933010_115933134_115933184_115933319
ES.31755.1	chr7	+	3282	1	FSM	ENSMUSG00000108738.2	ENSMUST00000205941.2	4052	1	2064	-1294	322	974	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTAGTAGTTCTCAGCA	NA	False	NA	NA	False	AATAAA	-27	NA	115935560	115938842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115935600_115938800
ES.31755.2	chr7	+	2254	1	FSM	ENSMUSG00000108738.2	ENSMUST00000205941.2	4052	1	2119	-321	377	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAATCCGATTGTCCTT	NA	False	NA	NA	False	CATAAA	-16	NA	115935615	115937869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_115935600_115937900
ES.31755.3	chr7	+	4459	4	Antisense	novelGene_ENSMUSG00000030660.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTGCTATTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	115938570	115948015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_115941508_115941591_115942328_115945353_115945479_115947354
ES.31756.1	chr7	+	167	1	Intergenic	novelGene_26033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAGAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115948446	115948613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115948400_115948600
ES.31757.1	chr7	+	174	1	Intergenic	novelGene_26038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	115979235	115979409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_115979200_115979400
ES.31758.1	chr7	+	172	1	Intergenic	novelGene_26042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	116026117	116026289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_116026100_116026300
ES.31759.10	chr7	-	8027	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	19.6591244817837	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	AATAAA	-1	NA	116042682	115936503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116041825_116041914_116042538
ES.31759.11	chr7	-	8250	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9801602902239	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	AATAAA	-1	NA	116042683	115936503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941076_115941288_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.12	chr7	-	8122	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	21.1704786051469	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	AATAAA	-1	NA	116042683	115936503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115948897_115948981_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.13	chr7	-	6901	30	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	18.7434649729296	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTGGCTGTCATTTCC	NA	False	NA	NA	False	AATAAA	-1	NA	116042686	115936503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989721_116017375_116017817_116042538
ES.31759.15	chr7	-	7909	32	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	17.8368137591343	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	False	NA	NA	False	ATTAAA	-39	NA	116042664	115936510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116016687_116017817_116042538
ES.31759.16	chr7	-	8025	33	NIC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_30	19.8005681736661	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	False	NA	NA	False	ATTAAA	-39	NA	116042692	115936510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116016687_116017817_116041825_116041914_116042538
ES.31759.17	chr7	-	7909	33	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	17.7750428533239	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAATAAAGGAACTTGGC	NA	False	NA	NA	False	ATTAAA	-36	NA	116042662	115936513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116042538
ES.31759.18	chr7	-	7816	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	13	-297	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_32	20.3164134995311	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAATTGTTTAATTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	116042661	115936807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116020025_116020129_116042538
ES.31759.19	chr7	-	7767	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	-36	313	-36	-302	multi-exon	FALSE	canonical	3	47	junction_32	13.7259733261434	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTTAAATTGTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	116042720	115936812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.2	chr7	-	176	1	Antisense	novelGene_ENSMUSG00000108738.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115935430	115935254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_115935300_115935400
ES.31759.20	chr7	-	7691	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	19	-302	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	19.6591244817837	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTTAAATTGTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	116042655	115936812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116041825_116041914_116042538
ES.31759.21	chr7	-	7919	35	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	1	-302	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_32	20.649404927877	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTTAAATTGTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	116042681	115936812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116020025_116020129_116041825_116041914_116042538
ES.31759.22	chr7	-	7586	32	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	-1	-302	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	18.4452955573987	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTTAAATTGTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	116042683	115936812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.23	chr7	-	9572	31	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	-1	-302	intron_retention	FALSE	canonical	2	3	junction_29	17.9419124460639	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTTAAATTGTTTAA	NA	False	NA	NA	False	ATTAAA	-21	NA	116042683	115936812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116016687_116017817_116042538
ES.31759.24	chr7	-	7840	34	FSM	ENSMUSG00000030660.10	ENSMUST00000206219.2	5670	34	-24	-2146	-24	-305	multi-exon	FALSE	canonical	3	22	junction_32	16.3820323083798	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGCCTTAAATTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	116042708	115936815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ES.31759.25	chr7	-	7618	32	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	10	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	21.4080809817587	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGCCTTAAATTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	116042664	115936815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973100_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116016687_116017817_116042538
ES.31759.26	chr7	-	7617	33	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	1	-306	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	17.7750428533239	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTGCCTTAAATTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	116042673	115936816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116042538
ES.31759.27	chr7	-	3672	9	NNC	ENSMUSG00000030660.10	novel	2830	18	NA	NA	-7447	-308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5750868602963	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATCTTGCCTTAAATT	4022	False	NA	NA	False	ATTAAA	-15	NA	115949328	115936818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941076_115941288_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267
ES.31759.28	chr7	-	6128	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	-2	1918	-2	422	multi-exon	FALSE	canonical	3	47	junction_32	13.7259733261434	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTATTTTGTTTGGTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	116042686	115938417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.29	chr7	-	6311	35	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-1	417	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_32	20.649404927877	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATTCCCTATTTTGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	116042683	115938422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116020025_116020129_116041825_116041914_116042538
ES.31759.3	chr7	-	177	2	Intergenic	novelGene_26031	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115962483	115935254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115935326_115962377
ES.31759.30	chr7	-	6668	14	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-8	415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.0677823571577	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATTCCCTATTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	116042692	115938424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941722_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115948466_115987588_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ES.31759.31	chr7	-	5940	32	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	-4	412	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	18.3872665526966	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTTATTCCCTATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	116042678	115938427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.32	chr7	-	6202	34	FSM	ENSMUSG00000030660.10	ENSMUST00000206219.2	5670	34	1	-533	-1	411	multi-exon	FALSE	canonical	3	22	junction_32	16.3820323083798	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGCCTTATTCCCTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	116042683	115938428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ES.31759.33	chr7	-	5888	32	NIC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	13	410	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	20.5664831443832	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCCTTATTCCCTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	116042661	115938429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ES.31759.34	chr7	-	6105	33	NNC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	11	408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	17.8292410364968	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCAGCCTTATTCCCT	NA	False	NA	NA	False	ATTAAA	-10	NA	116042663	115938431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042524
ES.31759.35	chr7	-	5497	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	-1	-73	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_31	19.6591244817837	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTGTCATTTTGGTC	NA	False	NA	NA	False	AATATA	-29	NA	116042683	115939034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016786_116017817_116041825_116041914_116042538
ES.31759.36	chr7	-	5476	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	22	2546	12	-84	multi-exon	FALSE	canonical	3	47	junction_32	13.7259733261434	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGACATAATACTGTG	NA	False	NA	NA	False	AATATA	-18	NA	116042662	115939045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.37	chr7	-	4168	31	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	-8	-189	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	18.1132241439477	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTCAGTCATATGACTA	NA	False	NA	NA	False	TATAAA	-17	NA	116042692	115939150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116042538
ES.31759.38	chr7	-	178	1	Intergenic	novelGene_26034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	115953689	115953511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115953500_115953700
ES.31759.39	chr7	-	179	1	Intergenic	novelGene_26035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115962484	115962305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115962300_115962500
ES.31759.4	chr7	-	177	2	Intergenic	novelGene_26032	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115962484	115935255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115935268_115962319
ES.31759.40	chr7	-	318	1	Intergenic	novelGene_26036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	115978705	115978387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115978400_115978700
ES.31759.41	chr7	-	171	1	Intergenic	novelGene_26037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGTAGATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	115978709	115978538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_115978500_115978700
ES.31759.42	chr7	-	1615	1	Intergenic	novelGene_26039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGCAAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	116014088	116012473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116012500_116014100
ES.31759.43	chr7	-	1235	1	Intergenic	novelGene_26040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9964	False	NA	NA	False	NA	NA	NA	116021021	116019786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116019800_116021000
ES.31759.44	chr7	-	177	1	Intergenic	novelGene_26041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9056	False	NA	NA	False	NA	NA	NA	116022051	116021874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116021900_116022100
ES.31759.5	chr7	-	8136	34	NNC	ENSMUSG00000030660.10	novel	5670	34	NA	NA	12	11	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_32	20.3164134995311	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCTTCTTGATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	116042662	115936488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116020025_116020129_116042538
ES.31759.7	chr7	-	6892	32	NIC	ENSMUSG00000030660.10	novel	8044	33	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	17.9375143895855	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCATTTCCTTCC	NA	False	NA	NA	False	AATAAA	-5	NA	116042661	115936499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116042538
ES.31759.8	chr7	-	8071	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	-27	0	-27	0	multi-exon	FALSE	canonical	3	47	junction_32	13.7259733261434	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCATTTCCTTCC	NA	False	NA	NA	False	AATAAA	-5	NA	116042711	115936499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ES.31759.9	chr7	-	8129	34	FSM	ENSMUSG00000030660.10	ENSMUST00000206219.2	5670	34	0	-2459	0	-3	multi-exon	FALSE	canonical	3	22	junction_32	16.3820323083798	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGGCTGTCATTTCCT	NA	False	NA	NA	False	AATAAA	-2	NA	116042684	115936502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ES.3176.1	chr10	-	5688	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	45	-670	45	670	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACACAGTATGTTTACT	5980	False	NA	NA	False	NA	NA	NA	77002337	76887341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.10	chr10	-	5052	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	66.8779438604388	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5939	False	NA	0	True	AATAAA	-20	NA	77002378	76888011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.11	chr10	-	5048	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	67.0604950772062	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	5939	False	NA	-1	True	AATAAA	-19	NA	77002378	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.12	chr10	-	3764	31	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	10908	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	99.5194899951205	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	NA	False	NA	-1	True	AATAAA	-19	NA	76914354	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909548_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290
ES.3176.14	chr10	-	5061	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	67.0860967339731	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	5932	False	NA	-1	True	AATAAA	-19	NA	77002385	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904200_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.15	chr10	-	4091	35	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	4119	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	93.7814261053485	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	NA	False	NA	-1	True	AATAAA	-19	NA	76921143	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100
ES.3176.17	chr10	-	4979	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	61	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	94.6826805356998	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	5996	False	NA	-1	True	AATAAA	-19	NA	77002321	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914368_76916508_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.2	chr10	-	5065	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	-1	-1	-1	1	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTATAAGCTGCCTT	5934	False	NA	1	True	AATAAA	-21	NA	77002383	76888010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.20	chr10	-	5009	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	94.5769222079714	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGGTTTATAAGCTGCC	5966	False	NA	-1	True	AATAAA	-19	NA	77002351	76888012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905765_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.24	chr10	-	3549	29	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	11614	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	78.6513473424042	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGGTTTATAAGCTGC	NA	False	NA	-2	True	AATAAA	-18	NA	76913648	76888013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909548_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517
ES.3176.26	chr10	-	5028	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	108.615935448108	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5952	False	NA	-3	True	AATAAA	-17	NA	77002365	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904199_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002274
ES.3176.27	chr10	-	5003	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	104.7967033378	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5972	False	NA	-3	True	AATAAA	-17	NA	77002345	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904199_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.29	chr10	-	5005	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	66.7985029772374	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5980	False	NA	-3	True	AATAAA	-17	NA	77002337	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905687_76906780_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.3	chr10	-	5021	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	94.4469628778193	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTATAAGCTGCCTT	5969	False	NA	1	True	AATAAA	-21	NA	77002348	76888010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907903_76909548_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.32	chr10	-	5013	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	66.7767736567139	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5973	False	NA	-3	True	AATAAA	-17	NA	77002344	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905765_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.33	chr10	-	5760	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-3	intron_retention	FALSE	canonical	0	0	junction_26	67.5608669492353	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5972	False	NA	-3	True	AATAAA	-17	NA	77002345	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.34	chr10	-	4979	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	85.7660763668149	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5973	False	NA	-3	True	AATAAA	-17	NA	77002344	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.39	chr10	-	4988	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	85.6829622487684	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5971	False	NA	-3	True	AATAAA	-17	NA	77002346	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904199_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.41	chr10	-	5017	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	67.5998202674921	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTTGGTTTATAAGCTG	5971	False	NA	-3	True	AATAAA	-17	NA	77002346	76888014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76909517_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.43	chr10	-	5759	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	44	-4	intron_retention	FALSE	non_canonical	0	0	junction_14	67.574781426303	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGCTTGGTTTATAAGCT	5979	False	NA	-4	True	AATAAA	-16	NA	77002338	76888015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904199_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.45	chr10	-	5791	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	14	-5	intron_retention	FALSE	canonical	3	279	junction_21	34.7994252826106	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGCTTGGTTTATAAGC	5949	False	NA	-5	True	AATAAA	-15	NA	77002368	76888016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.46	chr10	-	5045	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	66.1875096724817	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGCTTGGTTTATAAGC	5939	False	NA	-5	True	AATAAA	-15	NA	77002378	76888016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895228_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.47	chr10	-	5028	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	34	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	66.8779438604388	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGCTTGGTTTATAAGC	5969	False	NA	-5	True	AATAAA	-15	NA	77002348	76888016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907903_76909548_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.48	chr10	-	5052	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	88.2298265957589	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGCTTGGTTTATAAGC	5929	False	NA	-5	True	AATAAA	-15	NA	77002388	76888016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904198_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.49	chr10	-	5042	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.3877920956638	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGCTTGGTTTATAAGC	5949	False	NA	-5	True	AATAAA	-15	NA	77002368	76888016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890099_76890613_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.5	chr10	-	5036	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.374480608307	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5939	False	NA	0	True	AATAAA	-20	NA	77002378	76888011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893230_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904198_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909548_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.50	chr10	-	4997	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	104.574510540799	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACGCTTGGTTTATAAG	5970	False	NA	-6	True	AATAAA	-14	NA	77002347	76888017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905765_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914368_76916508_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.52	chr10	-	4745	43	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	-34674	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	84.9879409879936	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTCCTGCCCTTCCTC	NA	False	NA	4	True	AATAAA	-39	NA	77037056	76888849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77036176_77036578_77036827
ES.3176.53	chr10	-	4185	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	32	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	87.1659014466093	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGACTTCCTGCCCTTC	5967	False	NA	1	True	AATAAA	-36	NA	77002350	76888852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904199_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002274
ES.3176.54	chr10	-	4204	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	75.7394835934336	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGACTTCCTGCCCTT	5939	False	NA	0	True	AATAAA	-35	NA	77002378	76888853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904206_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.56	chr10	-	4255	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	-34	842	-34	-4	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGACTTCCTGCCCTT	5901	False	NA	0	True	AATAAA	-35	NA	77002416	76888853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.58	chr10	-	2530	26	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	-7003	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	74.076781787548	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGACTTCCTGCCCTT	NA	False	NA	0	True	AATAAA	-35	NA	76932265	76888853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890072_76904261_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824
ES.3176.6	chr10	-	5050	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	66.8779438604388	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5939	False	NA	0	True	AATAAA	-20	NA	77002378	76888011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909555_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.60	chr10	-	4205	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	67.0604950772062	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAACAGACTTCCTGCCC	5939	False	NA	-2	True	AATAAA	-33	NA	77002378	76888855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.61	chr10	-	4165	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	87.9940378112933	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACAACAGACTTCCTGC	5975	False	NA	-4	True	AATAAA	-31	NA	77002342	76888857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909548_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.63	chr10	-	4157	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	22	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	104.577079950482	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACATTTACAACAGAC	5957	False	NA	-11	True	AATAAA	-24	NA	77002360	76888864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907415_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.65	chr10	-	4905	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	45	-22	intron_retention	FALSE	canonical	3	279	junction_21	34.7994252826106	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5980	False	NA	-18	True	AATAAA	-17	NA	77002337	76888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.67	chr10	-	4134	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	30	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	66.311722171295	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5965	False	NA	-18	True	AATAAA	-17	NA	77002352	76888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921139_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.68	chr10	-	4136	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	36	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	119.747961882447	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5971	False	NA	-18	True	AATAAA	-17	NA	77002346	76888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909624_76910179_76910316_76912975_76913051_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916695_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.69	chr10	-	4204	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	3	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	66.8779438604388	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCTAAAACATTTAC	5938	False	NA	-18	True	AATAAA	-17	NA	77002379	76888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907903_76909548_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.7	chr10	-	5609	41	FSM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	20	-838	20	0	multi-exon	FALSE	canonical	2	6	junction_40	66.1190923637038	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	NA	False	NA	0	True	AATAAA	-20	NA	76949519	76888011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_76948792
ES.3176.70	chr10	-	4161	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	39	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	66.8779438604388	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5974	False	NA	-19	True	AATAAA	-16	NA	77002343	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76909548_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.71	chr10	-	4152	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	17	-23	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	64.1984764227314	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5952	False	NA	-19	True	AATAAA	-16	NA	77002365	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.72	chr10	-	2845	31	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	11073	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	75.8835657804479	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	76914189	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905765_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109
ES.3176.73	chr10	-	3534	39	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	-350	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	95.7430193892633	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	76925612	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76925541
ES.3176.74	chr10	-	1689	14	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	-7028	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	109.626207292982	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	76902859	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891623_76893214_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783
ES.3176.75	chr10	-	3973	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	68.7294265363982	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5972	False	NA	-19	True	AATAAA	-16	NA	77002345	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902823_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.76	chr10	-	4098	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	59	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.931375174282	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5994	False	NA	-19	True	AATAAA	-16	NA	77002323	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76890002_76890119_76890662_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.77	chr10	-	5709	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	34	-23	intron_retention	FALSE	canonical	3	279	junction_21	33.7921588537933	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5969	False	NA	-19	True	AATAAA	-16	NA	77002348	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.78	chr10	-	3118	33	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	8564	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	103.475800122239	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	76916698	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905687_76906780_76906885_76907398_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512
ES.3176.79	chr10	-	4146	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	88.2121195798098	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5972	False	NA	-19	True	AATAAA	-16	NA	77002345	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914368_76916508_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.8	chr10	-	5024	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	73.0617504238709	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5938	False	NA	0	True	AATAAA	-20	NA	77002379	76888011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.80	chr10	-	4442	41	NNC	ENSMUSG00000001435.16	novel	4791	41	NA	NA	-23934	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	66.9158006378165	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	NA	False	NA	-19	True	AATAAA	-16	NA	76973714	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_76973293
ES.3176.81	chr10	-	4178	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	14	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	75.5134714802597	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTCTAAAACATTTA	5949	False	NA	-19	True	AATAAA	-16	NA	77002368	76888872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.83	chr10	-	4108	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	185	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	88.2926220798825	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	6120	False	NA	-20	True	AATAAA	-15	NA	77002197	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905838_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123
ES.3176.84	chr10	-	4150	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	37	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	94.7914004482899	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5972	False	NA	-20	True	AATAAA	-15	NA	77002345	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76906765_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.85	chr10	-	4150	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	31	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	88.2298265957589	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5966	False	NA	-20	True	AATAAA	-15	NA	77002351	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904206_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.88	chr10	-	4155	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	26	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	88.2175304339854	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5961	False	NA	-20	True	AATAAA	-15	NA	77002356	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905687_76906780_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.89	chr10	-	4142	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	45	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	88.2298265957589	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5980	False	NA	-20	True	AATAAA	-15	NA	77002337	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76904200_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.92	chr10	-	4096	39	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	49	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	102.559380813253	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTTCTAAAACATTT	5984	False	NA	-20	True	AATAAA	-15	NA	77002333	76888873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76906780_76906885_76907144_76907181_76907437_76907510_76907860_76907917_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.94	chr10	-	4166	40	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	13	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	88.0596295492123	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATATTTTTCTAAAACA	5948	False	NA	-23	True	AATAAA	-12	NA	77002369	76888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905765_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.95	chr10	-	4177	41	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	3	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	87.1513625825781	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATATTTTTCTAAAACA	5938	False	NA	-23	True	AATAAA	-12	NA	77002379	76888876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76912975_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923252_76924699_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.96	chr10	-	4185	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	4	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.8623661813072	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGTATATTTTTCTAAA	5939	False	NA	-26	True	AATAAA	-9	NA	77002378	76888879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894538_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ES.3176.99	chr10	-	3255	3	ISM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	36	41248	36	-12701	5prime_fragment	FALSE	canonical	3	360	junction_2	15.5	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAACAAAAAAA	5971	False	NA	NA	False	NA	NA	NA	77002346	76929259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_76932370_77002123_77002195_77002272
ES.31760.1	chr7	+	815	1	FSM	ENSMUSG00000108461.2	ENSMUST00000206201.2	750	1	-64	-1	-64	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGGATGAAGTTCTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	116042745	116043560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_116042700_116043600
ES.31761.1	chr7	+	122	1	Intergenic	novelGene_26043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116085319	116085441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_116085300_116085400
ES.31762.1	chr7	+	1687	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	0	-2	0	2	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACACGTTTTTATCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	116103603	116139821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.10	chr7	+	5006	15	Fusion	ENSMUSG00000030659.15_ENSMUSG00000108736.2	novel	1685	14	NA	NA	-1	-29	multi-exon	FALSE	non_canonical	0	0	junction_13	24.3922035051517	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTTGAGACTAAAGTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	116103648	116144961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676_116141857_116142073_116143296_116144683
ES.31762.11	chr7	+	171	1	Intergenic	novelGene_26044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGATTTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	116113337	116113508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_116113300_116113500
ES.31762.12	chr7	+	1146	10	ISM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	21591	1	-2852	-1	3prime_fragment	FALSE	canonical	3	52	junction_5	7.00793201387621	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACACACGTTTTTATCT	NA	False	NA	NA	False	AATAAA	-43	NA	116125194	116139818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.13	chr7	+	3797	2	NIC	ENSMUSG00000030659.15	novel	1913	13	NA	NA	3892	-31	intron_retention	FALSE	canonical	3	72	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGCAAGCATACTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	116131938	116139647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_116135268_116139179
ES.31762.2	chr7	+	1483	13	NNC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.7260770033083	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACACACGTTTTTATCT	NA	False	NA	NA	False	AATAAA	-43	NA	116103609	116139818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116128052_116128112_116128209_116128303_116129759_116129827_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.3	chr7	+	1810	15	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	22.8590400998317	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACACACGTTTTTATC	NA	False	NA	NA	False	AATAAA	-42	NA	116103619	116139817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116129683_116129827_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.4	chr7	+	1595	12	NIC	ENSMUSG00000030659.15	novel	1913	13	NA	NA	3	-255	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	20.4866414850957	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAATTTCATGGGTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	116103621	116139423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179
ES.31762.5	chr7	+	5670	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	8	4	intron_retention	FALSE	canonical	3	41	junction_2	11.5117693398249	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTTTTTATCTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	116103626	116139823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.6	chr7	+	2344	15	NNC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	22.8590400998317	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACACACGTTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	116103627	116139814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116129138_116129827_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31762.8	chr7	+	2069	13	FSM	ENSMUSG00000030659.15	ENSMUST00000183175.8	1913	13	-20	-136	11	-5	multi-exon	FALSE	canonical	3	41	junction_2	11.5854314646552	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACACACGTTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	116103629	116139814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179
ES.31762.9	chr7	+	2971	13	NIC	ENSMUSG00000030659.15	novel	1685	14	NA	NA	-9	-30	intron_retention	FALSE	canonical	2	4	junction_9	20.6577601776077	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGGAATAAAGGAAGAGA	NA	False	NA	NA	False	AATAAA	-14	NA	116103640	116139789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_116103720_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116129827_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ES.31763.1	chr7	+	193	1	Intergenic	novelGene_26045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTGCTTCCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	116171814	116172007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_116171800_116172000
ES.31764.1	chr7	-	179	2	Intergenic	novelGene_26046	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGGAGCAAGCAGGGCC	5499	False	NA	NA	False	NA	NA	NA	116184148	116172851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116172860_116183977
ES.31764.2	chr7	-	770	1	Intergenic	novelGene_26047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGGGCTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	116173879	116173109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116173100_116173900
ES.31764.3	chr7	-	177	1	Intergenic	novelGene_26048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGATTCCACT	5499	False	NA	NA	False	NA	NA	NA	116184148	116183971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116184000_116184100
ES.31765.1	chr7	-	341	1	Intergenic	novelGene_26049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATAATAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	116310802	116310461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116310500_116310800
ES.31765.2	chr7	-	82	1	Intergenic	novelGene_26050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116310803	116310721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_116310700_116310800
ES.31766.1	chr7	-	1395	2	Genic_Genomic	ENSMUSG00000107383.2	novel	1342	1	NA	NA	10	101	multi-exon	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGTGAACTTGAAGTAT	NA	False	NA	NA	False	ATTAAA	-39	NA	116425076	116423643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_116424990_116425027
ES.31767.1	chr7	+	9255	12	FSM	ENSMUSG00000030657.12	ENSMUST00000032892.7	9020	12	-235	0	-235	0	multi-exon	TRUE	canonical	0	0	junction_1	2.1242402628269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTTATGGTTACTTT	NA	False	NA	NA	False	AATAAA	-21	NA	116979978	117272803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_116980756_117074726_117074766_117147818_117148333_117191100_117191274_117192763_117192967_117221146_117221228_117233826_117234044_117236821_117236999_117242704_117242968_117249840_117250037_117255634_117255969_117266522
ES.31767.2	chr7	+	3166	11	ISM	ENSMUSG00000030657.12	ENSMUST00000032892.7	9020	12	-154	16562	-154	-16562	5prime_fragment	FALSE	canonical	0	0	junction_1	2.2113344387496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTTTTAACATGGCT	NA	False	NA	NA	False	NA	NA	NA	116980059	117256241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_116980756_117074726_117074766_117147818_117148333_117191100_117191274_117192763_117192967_117221146_117221228_117233826_117234044_117236821_117236999_117242704_117242968_117249840_117250037_117255634
ES.31768.1	chr7	-	177	1	Intergenic	novelGene_26051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTTTAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	117280180	117280003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_117280000_117280200
ES.31769.1	chr7	-	5932	1	Genic_Genomic	ENSMUSG00000008683.17	novel	NA	NA	NA	NA	6777	1852	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTAAATTCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	117707674	117701742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_117701700_117707700
ES.31769.2	chr7	-	5145	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	28	6	28	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCTTGTCTGAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	117715383	117703600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
ES.31769.3	chr7	-	3201	1	ISM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	7473	1143	6513	-1137	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCGTGGTCATGT	NA	False	NA	NA	False	NA	NA	NA	117707938	117704737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117704700_117707900
ES.31769.4	chr7	-	518	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	-12	4673	-12	19	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCTGCAGCAGAGTAGC	NA	False	NA	-14	True	AATAAA	-38	NA	117715423	117708267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
ES.31769.5	chr7	-	453	5	NNC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3600.67732343513	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715386	117708286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117708417_117709155_117709242_117714007_117714075_117714327_117714470_117715358
ES.31769.7	chr7	-	826	5	NIC	ENSMUSG00000008683.17	novel	5179	5	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	4290.87441554749	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGGTCAGTCCTTTTG	NA	False	NA	-34	True	AATAAA	-18	NA	117715355	117708287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714962
ES.3177.1	chr10	+	200	1	Intergenic	novelGene_2492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACCTGCACTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	77057928	77058128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77057900_77058100
ES.31770.1	chr7	+	1715	1	Antisense	novelGene_ENSMUSG00000030654.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTCGTTCTTGCCTAG	NA	False	NA	NA	False	AATACA	-17	NA	117726192	117727907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117726200_117727900
ES.31771.1	chr7	+	9223	21	Intergenic	novelGene_26052	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117741189	117770547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117742616_117744553_117745023_117745189_117745375_117745467_117745625_117747956_117748183_117751499_117751740_117751901_117752170_117753391_117753673_117753798_117753972_117755146_117756189_117756273_117756417_117757216_117757465_117758812_117759041_117759378_117759632_117762374_117762598_117765192_117765346_117765584_117765804_117766343_117766506_117767034_117767218_117767320_117767547_117767829
ES.31771.2	chr7	+	5664	13	Intergenic	novelGene_26053	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGGGCTGGTGATAAAA	NA	False	NA	NA	False	NA	NA	NA	117741189	117814197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117742616_117744553_117745023_117745189_117745375_117745467_117745625_117747956_117748183_117751499_117751740_117751901_117752170_117753391_117753673_117753798_117753972_117755146_117755334_117755733_117756417_117757216_117758526_117814137
ES.31771.3	chr7	+	5053	1	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGAGCAAGAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	117741190	117746243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117741200_117746200
ES.31771.4	chr7	+	4793	3	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGAGCAAGAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	117741190	117746243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117745023_117745189_117745375_117745467
ES.31771.5	chr7	+	4939	2	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117741190	117746222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117745375_117745467
ES.31771.6	chr7	+	4958	2	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGAGCAAGAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	117741191	117746243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117745382_117745475
ES.31771.7	chr7	+	5957	9	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTGTTTAGATGAATCA	NA	False	NA	NA	False	NA	NA	NA	117755490	117770574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117756417_117757216_117757465_117758812_117759041_117759378_117759636_117762376_117762600_117765192_117765351_117765588_117765804_117766343_117766506_117767034
ES.31771.8	chr7	+	3067	1	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	117755491	117758558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_117755500_117758600
ES.31772.1	chr7	+	188	1	Intergenic	novelGene_26055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATGATGGTGAA	NA	False	NA	NA	False	NA	NA	NA	117825841	117826029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117825800_117826000
ES.31773.1	chr7	+	177	1	Intergenic	novelGene_26056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	117834511	117834688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117834500_117834700
ES.31774.1	chr7	+	194	1	Intergenic	novelGene_26057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAAGGGTCAGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	117839992	117840186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117840000_117840200
ES.31775.1	chr7	-	2389	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	-305	-1	305	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTGAAATTGCTGACT	NA	False	NA	-8	True	AGTAAA	-14	NA	117728798	117717808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.10	chr7	-	2037	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	897.784201365909	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCACTTTCTTTGT	NA	False	NA	-20	True	ATTAAA	-16	NA	117728798	117718122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719323_117719360_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.13	chr7	-	1915	8	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1081.60538279061	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTCTCACTTTCTTT	NA	False	NA	-22	True	ATTAAA	-14	NA	117728798	117718124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117718778_117718860_117719094_117719168_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.14	chr7	-	1939	5	FSM	ENSMUSG00000030654.10	ENSMUST00000203154.3	542	5	1	-1398	-1	-11	multi-exon	FALSE	canonical	3	10	junction_4	977.48375945588	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTCTCACTTTCTTT	NA	False	NA	-22	True	ATTAAA	-14	NA	117728798	117718124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117728691
ES.31775.15	chr7	-	13196	67	Fusion	ENSMUSG00000030655.16_ENSMUSG00000030654.10	novel	2287	13	NA	NA	1	-12	multi-exon	TRUE	canonical	0	0	junction_5	544.751652331675	1344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTGTCTCACTTTCTT	NA	False	NA	-23	True	ATTAAA	-13	NA	117842845	117718125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.16	chr7	-	1984	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	948.691519936802	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTGTCTCACTTTCT	NA	False	NA	-24	True	ATTAAA	-12	NA	117728799	117718126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728779
ES.31775.17	chr7	-	2243	7	NIC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	1109.74947122713	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTTGTCTCACTTTC	NA	False	NA	-25	True	ATTAAA	-11	NA	117728798	117718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728118_117728292_117728691
ES.31775.18	chr7	-	2080	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	978.814670915797	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTTGTCTCACTTTC	NA	False	NA	-25	True	ATTAAA	-11	NA	117728796	117718127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719646_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.19	chr7	-	2054	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-6	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	948.691519936802	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCTTTTGTCTCACTTT	NA	False	NA	-26	True	ATTAAA	-10	NA	117728789	117718128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726485_117728691
ES.31775.2	chr7	-	2309	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	0	304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	897.784201365909	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTGAAATTGCTGAC	NA	False	NA	-9	True	AGTAAA	-13	NA	117728799	117717809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117718384_117718463_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.20	chr7	-	2045	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	978.222592255975	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCCTTTTGTCTCACTT	NA	False	NA	-27	True	ATTAAA	-9	NA	117728796	117718129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719634_117720383_117720453_117721153_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.21	chr7	-	1980	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	897.784201365909	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCCTTTTGTCTCACT	NA	False	NA	-28	True	ATTAAA	-8	NA	117728796	117718130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719102_117719186_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.22	chr7	-	1910	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	897.784201365909	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGCAGTTTTAATCAT	NA	False	NA	-32	True	AATACA	-18	NA	117728798	117718193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117718766_117718859_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.23	chr7	-	1921	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	936.632393204506	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTTGGCAGTTTTAA	NA	False	NA	-36	True	AATACA	-14	NA	117728798	117718197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725656_117726352_117726491_117728691
ES.31775.24	chr7	-	1959	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	125	-1	-125	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATTTGTGTGTGTGTGA	NA	False	NA	-77	True	NA	NA	NA	117728798	117718238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.25	chr7	-	1476	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	90	605	0	-605	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTTCGTAGTATTGG	NA	False	NA	48	True	AAAAAG	-29	NA	117728795	117718718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.26	chr7	-	1107	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	97	967	-5	394	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTAGTGTGTGTAAGT	NA	False	NA	NA	False	GATAAA	-12	NA	117728788	117719080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.27	chr7	-	892	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	87	1192	-1	169	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTTGTACAGTGAA	NA	False	NA	NA	False	NA	NA	NA	117728798	117719305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.28	chr7	-	5425	2	NNC	ENSMUSG00000030654.10	novel	454	3	NA	NA	-1	-2087	intron_retention	FALSE	non_canonical	0	0	junction_1	0	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAATAAGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	117728798	117722536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117724112_117724948
ES.31775.29	chr7	-	2607	4	NNC	ENSMUSG00000030654.10	novel	454	3	NA	NA	0	-2087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1201.852181704	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAATAAGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	117728799	117722536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117724112_117724948_117725739_117726356_117726491_117728691
ES.31775.3	chr7	-	2132	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	41	-2	41	2	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTTAACTCTGAGT	NA	False	NA	-9	True	ATTAAA	-27	NA	117728844	117718111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.30	chr7	-	3222	3	NNC	ENSMUSG00000030654.10	novel	454	3	NA	NA	-1	-2087	intron_retention	FALSE	non_canonical	0	0	junction_1	1253.5	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAAATAAGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	117728796	117722536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117724112_117724948_117726491_117728691
ES.31775.32	chr7	-	375	3	FSM	ENSMUSG00000030654.10	ENSMUST00000206536.2	454	3	-3	82	-1	-82	multi-exon	FALSE	canonical	3	2507	junction_2	41.5	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATAAGTGTGCTGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	117728798	117725604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117725739_117726356_117726491_117728691
ES.31775.33	chr7	-	10950	34	ISM	ENSMUSG00000030655.16	ENSMUST00000179331.9	12147	61	39814	-2853	-13892	114	3prime_fragment	FALSE	canonical	3	49	junction_33	21.7744511242668	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTACTCCCTTTTGAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	117772379	117730416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276
ES.31775.34	chr7	-	15497	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_53	27.4460401454748	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGCTCTGAATTTATTG	NA	False	NA	1	True	AATAAA	-34	NA	117842899	117730525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795155_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.35	chr7	-	13542	41	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	6627	0	intron_retention	FALSE	canonical	3	32	junction_36	26.2022780498185	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATCTAAGCTCTGAATT	NA	False	NA	-4	True	AATAAA	-29	NA	117784887	117730530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589
ES.31775.36	chr7	-	15487	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_55	27.374346361323	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATCTAAGCTCTGAATT	NA	False	NA	-4	True	AATAAA	-29	NA	117842801	117730530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799971_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.37	chr7	-	5982	14	NNC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	-6977	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.7884555325992	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTATCTAAGCTCTGAA	NA	False	NA	-6	True	AATAAA	-27	NA	117747999	117730532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117732640_117733122_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956
ES.31775.38	chr7	-	5738	5	NIC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	702	-2	intron_retention	FALSE	canonical	3	101	junction_3	10.2102889283311	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTATCTAAGCTCTGAA	NA	False	NA	-6	True	AATAAA	-27	NA	117740320	117730532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117739110_117739652
ES.31775.39	chr7	-	15595	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	-41	3	-8	-3	multi-exon	FALSE	canonical	3	32	junction_39	26.3486045060696	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117842901	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.41	chr7	-	15624	64	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-12	-3	combination_of_known_junctions	TRUE	canonical	2	4	junction_62	28.2777053846152	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117842872	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942_117817001_117842427
ES.31775.42	chr7	-	4657	4	NNC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	2318	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.9969696134857	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117738704	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736270_117738635
ES.31775.43	chr7	-	15591	61	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	53	-3	intron_retention	FALSE	non_canonical	0	0	junction_28	29.1912229959623	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117842793	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767831_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795155_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.44	chr7	-	14082	54	NNC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	-6073	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	28.1278042389824	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117797587	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770920_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413
ES.31775.45	chr7	-	15472	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.3924346027355	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGTATCTAAGCTCTGA	NA	False	NA	-7	True	AATAAA	-26	NA	117842871	117730533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736184_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.46	chr7	-	4508	1	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGTATCTAAGCTCT	NA	False	NA	-9	True	AATAAA	-24	NA	117735043	117730535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117730500_117735000
ES.31775.48	chr7	-	15376	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	28.481628706542	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGTATCTAAGCTCT	NA	False	NA	-9	True	AATAAA	-24	NA	117842836	117730535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736187_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767908_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.5	chr7	-	1962	5	NIC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	999.893338061615	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728796	117718113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117719634_117720383_117720469_117721148_117721267_117726356_117726491_117728691
ES.31775.53	chr7	-	5920	9	NIC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	-3767	-10	intron_retention	FALSE	canonical	3	89	junction_8	11.3357840487546	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATAACAGTATCTAA	NA	False	NA	-14	True	AATAAA	-19	NA	117744789	117730540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553
ES.31775.54	chr7	-	7792	19	NNC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	3297	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.1296095335646	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATAACAGTATCTAA	NA	False	NA	-14	True	AATAAA	-19	NA	117755190	117730540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740244_117740393_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148
ES.31775.57	chr7	-	15423	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	1	-120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_55	27.374346361323	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGCATCATTTGAAAA	NA	False	NA	8	True	AATAAA	-25	NA	117842845	117730650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799983_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.58	chr7	-	4987	1	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-593	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATAATGCATCATTTG	NA	False	NA	4	True	AATAAA	-21	NA	117735641	117730654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117730700_117735600
ES.31775.6	chr7	-	5618	6	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	960.197687978887	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728817	117718113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117719634_117720383_117720469_117721148_117724112_117724948_117725739_117726356_117726491_117728691
ES.31775.60	chr7	-	5099	7	NNC	ENSMUSG00000030655.16	novel	12147	61	NA	NA	313	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.1830158419374	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTCCATAATGCAT	NA	False	NA	-2	True	AATAAA	-15	NA	117740709	117730660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736184_117738635_117738743_117738897_117739110_117739652_117739881_117740532
ES.31775.62	chr7	-	14288	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-7	-1205	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_53	27.4460401454748	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGTCTTAGGTCCTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	117842900	117731735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795155_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.63	chr7	-	14369	64	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	11	-1221	combination_of_known_junctions	FALSE	canonical	2	4	junction_62	28.2777053846152	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGAGTTGATGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	117842835	117731751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942_117817001_117842427
ES.31775.65	chr7	-	12412	63	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	6	-338	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	27.6814231257049	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTTTTTTAATTCA	NA	False	NA	NA	False	AATAAA	-23	NA	117842854	117733607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767908_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.66	chr7	-	12469	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	9	3079	-5	-340	multi-exon	FALSE	canonical	3	32	junction_39	26.3486045060696	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAATGTTTTTTAATT	NA	False	NA	NA	False	AATAAA	-21	NA	117842851	117733609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.67	chr7	-	12524	64	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	6	-346	combination_of_known_junctions	FALSE	canonical	2	4	junction_62	28.2777053846152	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGAGTGAAATGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	117842854	117733615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942_117817001_117842427
ES.31775.69	chr7	-	4018	18	ISM	ENSMUSG00000030655.16	ENSMUST00000179331.9	12147	61	46836	9100	-6870	-2362	internal_fragment	FALSE	canonical	3	63	junction_16	15.205398786258	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTATATTCTGATCACA	NA	False	NA	NA	False	AATAAA	-21	NA	117765357	117742369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192
ES.31775.7	chr7	-	1691	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	893.01138477252	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTCTTTGTTAACTCT	NA	False	NA	-13	True	ATTAAA	-23	NA	117728798	117718115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117718425_117718815_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.70	chr7	-	7485	41	ISM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	20	27815	6	-1318	5prime_fragment	FALSE	canonical	3	32	junction_17	11.4192819388962	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAATATTCATTATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	117842840	117758345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.71	chr7	-	5065	31	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-7	-15073	combination_of_known_junctions	FALSE	canonical	2	4	junction_29	13.2304782814362	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGATTGTTCCTGGA	NA	False	NA	NA	False	AATAAA	-29	NA	117842867	117772100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942_117817001_117842427
ES.31775.72	chr7	-	4143	26	ISM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	0	49067	0	10383	5prime_fragment	FALSE	canonical	3	32	junction_2	6.67532770731145	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATTTGGGAATGGTTT	NA	False	NA	NA	False	AAGAAA	-4	NA	117842860	117779597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.73	chr7	-	177	1	Intergenic	novelGene_26054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	117781422	117781245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_117781200_117781400
ES.31775.74	chr7	-	3039	15	ISM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	9	58657	-5	793	5prime_fragment	FALSE	canonical	3	33	junction_7	6.03391773769796	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGAGTGTCTTGTTGTTT	NA	False	NA	NA	False	GATAAA	-14	NA	117842851	117789187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.75	chr7	-	2823	13	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-5	28	intron_retention	FALSE	canonical	3	33	junction_6	6.05530070819498	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAATGTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	117842865	117789952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.76	chr7	-	2265	14	NNC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	34	28	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	11.8051237496928	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGAATGTTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	117842812	117789952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117790139_117792672_117792943_117794258_117794361_117795033_117795155_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.77	chr7	-	2168	1	FSM	ENSMUSG00000030655.16	ENSMUST00000208930.2	1534	1	-607	-27	-607	27	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAATGTTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	117792121	117789953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117790000_117792100
ES.31775.78	chr7	-	3213	13	FSM	ENSMUSG00000030655.16	ENSMUST00000208209.2	2287	13	-8	-918	6	918	multi-exon	FALSE	canonical	3	33	junction_5	6.14353770685552	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTCTTTACCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	117842854	117791684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ES.31775.79	chr7	-	4257	12	NNC	ENSMUSG00000030655.16	novel	2287	13	NA	NA	-6	889	intron_retention	FALSE	canonical	2	4	junction_10	18.5387688483681	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117842899	117791713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117792943_117794258_117795155_117797413_117797588_117799883_117799982_117801752_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942_117817001_117842427
ES.31775.8	chr7	-	1944	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	897.784201365909	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTTTCTTTGTT	NA	False	NA	-19	True	ATTAAA	-17	NA	117728799	117718121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_117718761_117718893_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ES.31775.80	chr7	-	5785	1	NIC	ENSMUSG00000030655.16	novel	15557	63	NA	NA	-5984	889	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117797498	117791713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_117791700_117797500
ES.31775.9	chr7	-	3480	10	Fusion	ENSMUSG00000030655.16_ENSMUSG00000030654.10	novel	2171	6	NA	NA	1911	-9	multi-exon	FALSE	canonical	0	0	junction_5	1124.28740668901	1292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCACTTTCTTTGT	NA	False	NA	-20	True	ATTAAA	-16	NA	117739111	117718122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117733937_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897
ES.31776.1	chr7	+	155	1	Intergenic	novelGene_26058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGGTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	117865660	117865815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_117865700_117865800
ES.31777.1	chr7	-	1867	1	Intergenic	novelGene_26059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTAAGATGGGTTGATC	NA	False	NA	NA	False	NA	NA	NA	117896261	117894394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_117894400_117896300
ES.31778.1	chr7	-	182	1	Intergenic	novelGene_26060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATATTTACTGTA	NA	False	NA	NA	False	NA	NA	NA	117948460	117948278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_117948300_117948500
ES.31779.1	chr7	-	344	1	Intergenic	novelGene_26061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAACCCAAAAG	NA	False	NA	NA	False	NA	NA	NA	117966805	117966461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_117966500_117966800
ES.3178.1	chr10	+	2329	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	-26	-13	-26	13	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGTCTTTTTAAGTA	NA	False	NA	29	True	AATAAA	-30	NA	77095025	77105422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ES.3178.2	chr10	+	401	2	ISM	ENSMUSG00000020260.10	ENSMUST00000217993.2	7010	5	-37	8768	-37	-6165	5prime_fragment	FALSE	canonical	3	179	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTATGAGCAGTTCATTG	NA	False	NA	6	True	AATAAA	-15	NA	77095114	77096635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_77095288_77096407
ES.3178.3	chr10	+	3411	8	NNC	ENSMUSG00000020260.10	novel	2290	9	NA	NA	-13	0	intron_retention	FALSE	canonical	2	2	junction_7	47.7604567031116	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCTGCAGTCCTAGA	NA	False	NA	10	True	AATAAA	-11	NA	77095138	77105403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103022
ES.3178.4	chr10	+	3510	7	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	89	0	-11	0	intron_retention	FALSE	canonical	3	83	junction_5	31.7052396651125	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	16	True	AATAAA	-17	NA	77095140	77105409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746
ES.3178.5	chr10	+	2279	9	NIC	ENSMUSG00000020260.10	novel	2290	9	NA	NA	-10	8	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	45.99184710359	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGAAATGGTGTCTTTTT	NA	False	NA	24	True	AATAAA	-25	NA	77095141	77105417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101867_77102746_77102928_77103017_77103142_77104360
ES.3178.7	chr10	+	5816	2	NIC	ENSMUSG00000020260.10	novel	2290	9	NA	NA	-267	0	intron_retention	FALSE	canonical	3	104	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	16	True	AATAAA	-17	NA	77098013	77105409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77099210_77100789
ES.3178.8	chr10	+	1659	3	NNC	ENSMUSG00000020260.10	novel	7010	5	NA	NA	-317	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	65.5	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCAGTCCTAGAAAT	NA	False	NA	13	True	AATAAA	-14	NA	77102433	77105406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77102928_77103022_77103142_77104360
ES.31780.1	chr7	+	176	1	Intergenic	novelGene_26062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACATGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	118035012	118035188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118035000_118035200
ES.31781.1	chr7	+	179	1	Intergenic	novelGene_26063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATTAGA	NA	False	NA	NA	False	NA	NA	NA	118058670	118058849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118058700_118058800
ES.31782.1	chr7	-	3726	1	FSM	ENSMUSG00000095115.3	ENSMUST00000178344.3	6865	1	41	3098	41	-3098	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGTCATTGTTTCATT	NA	False	NA	NA	False	GATAAA	-13	NA	118091157	118087431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118087400_118091200
ES.31783.1	chr7	-	3625	5	NIC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-4	562	intron_retention	FALSE	canonical	3	921	junction_3	45.3376223461266	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTTAACTTTGTGACT	6676	False	NA	NA	False	AATAAA	-11	NA	118132528	118122662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118128961_118132401
ES.31783.2	chr7	-	898	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	16	0	16	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6641	False	NA	-2	True	AATAAA	-16	NA	118132563	118124284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ES.31783.3	chr7	-	2013	5	NIC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	921	junction_3	45.3376223461266	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGGTTTTCTTGTGC	6665	False	NA	-3	True	AATAAA	-15	NA	118132539	118124285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118128961_118132401
ES.31783.5	chr7	-	4270	3	NIC	ENSMUSG00000030652.12	novel	914	6	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	940	junction_1	50	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTCCTTGGTTTTCTT	6675	False	NA	-7	True	AATAAA	-11	NA	118132529	118124289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118124518_118125046_118128961_118132401
ES.31784.1	chr7	+	1714	1	Intergenic	novelGene_26064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAACAACTTTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	118180912	118182626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118180900_118182600
ES.31785.1	chr7	-	4554	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	-6	-2	-6	2	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGGGTGCGTGTTGTG	4138	False	NA	0	True	AATAAA	-20	NA	118183965	118135061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.11	chr7	-	4470	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	34.9545736953295	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGTGTTGGGTGCGTG	4195	False	NA	-5	True	AATAAA	-15	NA	118183908	118135066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165627_118183826
ES.31785.13	chr7	-	5655	15	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_8	45.3128017231334	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGTGTTGGGTGCGTG	4195	False	NA	-5	True	AATAAA	-15	NA	118183908	118135066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118138717_118141108_118141248_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150529_118151933_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.15	chr7	-	4511	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.5231645259946	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTTGGGTGCGT	4152	False	NA	-6	True	AATAAA	-14	NA	118183951	118135067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142630_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.16	chr7	-	4502	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.0323025538177	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTTGGGTGCGT	4167	False	NA	-6	True	AATAAA	-14	NA	118183936	118135067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150529_118151933_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.17	chr7	-	4512	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.0703420127162	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTTGGGTGCGT	4185	False	NA	-6	True	AATAAA	-14	NA	118183918	118135067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145023_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.18	chr7	-	4618	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.011780661367	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTTGGGTGCGT	4184	False	NA	-6	True	AATAAA	-14	NA	118183919	118135067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150354_118150533_118151916_118152069_118155045_118155192_118158078_118158162_118160105_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.19	chr7	-	6667	15	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_4	47.0696401134337	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATATGTGTTGGGTGCGT	4189	False	NA	-6	True	AATAAA	-14	NA	118183914	118135067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118145023_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151933_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.2	chr7	-	4543	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	31.5472132947851	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4130	False	NA	-2	True	AATAAA	-18	NA	118183973	118135063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141248_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.21	chr7	-	4354	14	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8265898524877	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTATATATGTGTTGGG	4152	False	NA	-11	True	AATAAA	-9	NA	118183951	118135072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151933_118152069_118155045_118155192_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.22	chr7	-	3884	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	28	634	1	-634	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCATTCTACAAATCCT	4172	False	NA	NA	False	AATAAA	-15	NA	118183931	118135697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.23	chr7	-	3542	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	28	976	1	-976	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTTGTAGCTTCCATGT	4172	False	NA	NA	False	NA	NA	NA	118183931	118136039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.24	chr7	-	3359	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-4	-1188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.0899795763216	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTGTCTAATTTGATC	4167	False	NA	NA	False	AATAAA	-38	NA	118183936	118136251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146662_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.25	chr7	-	3326	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	8	1212	8	-1212	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTTATGGGGCGTCC	4152	False	NA	NA	False	AATAAA	-14	NA	118183951	118136275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.26	chr7	-	3100	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	55	1391	5	-1391	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACAAAGGTTGGGTTCT	4199	False	NA	NA	False	NA	NA	NA	118183904	118136454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.27	chr7	-	2316	9	NNC	ENSMUSG00000042246.6	novel	2298	11	NA	NA	19	-2473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.087803018522	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAGAAATAAATA	4213	False	NA	NA	False	NA	NA	NA	118183890	118148280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160105_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.28	chr7	-	5921	1	NIC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	11648	-2474	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAGAAAAGAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	118154202	118148281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118148300_118154200
ES.31785.29	chr7	-	3401	5	NNC	ENSMUSG00000042246.6	novel	2298	11	NA	NA	5852	-2482	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	55.8854855933095	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	118159998	118148289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118149316_118150358_118150533_118151933_118152069_118155045_118155192_118158078
ES.31785.3	chr7	-	4444	15	NIC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.9552584783491	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4167	False	NA	-2	True	AATAAA	-18	NA	118183936	118135063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118137441_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.4	chr7	-	4484	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	2756	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	33.7974358001708	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	6950	False	NA	-2	True	AATAAA	-18	NA	118181153	118135063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118181082
ES.31785.6	chr7	-	6577	15	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	15	junction_3	31.336227974558	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTGGGTGCGTGTT	4147	False	NA	-3	True	AATAAA	-17	NA	118183956	118135064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141248_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.8	chr7	-	4324	15	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.2382692489115	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGTGTTGGGTGCGTG	4172	False	NA	-5	True	AATAAA	-15	NA	118183931	118135066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150529_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ES.31785.9	chr7	-	4495	16	NNC	ENSMUSG00000042246.6	novel	4546	16	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	34.8747600549292	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGTGTTGGGTGCGTG	4156	False	NA	-5	True	AATAAA	-15	NA	118183947	118135066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165443_118165649_118183826
ES.31786.1	chr7	+	3622	22	NNC	ENSMUSG00000030650.19	novel	3774	22	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.64130361329658	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAAGCCTCTGAATGGT	NA	False	NA	NA	False	AATAAA	-22	NA	118196650	118274308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118196768_118199406_118199531_118222225_118223042_118226376_118226460_118227975_118228066_118237351_118237452_118239142_118239231_118241430_118241680_118244494_118244647_118247020_118247166_118248664_118248821_118251732_118251885_118254139_118254219_118255981_118256080_118258760_118258854_118265757_118265834_118266049_118266184_118268389_118268564_118269881_118269961_118271397_118271503_118272645_118272689_118273839
ES.31786.2	chr7	+	3949	22	NNC	ENSMUSG00000030650.19	novel	3774	22	NA	NA	187	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.67954210367128	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGGGATGCAAAGCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	118196706	118274300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118196768_118199036_118199531_118222225_118223042_118226376_118226481_118227975_118228066_118237351_118237452_118239142_118239231_118241430_118241680_118244494_118244647_118247020_118247166_118248664_118248821_118251732_118251885_118254139_118254219_118255981_118256080_118258760_118258854_118265757_118265834_118266049_118266184_118268389_118268564_118269881_118269961_118271397_118271503_118272645_118272689_118273839
ES.31786.3	chr7	+	1656	1	Intergenic	novelGene_26065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAACCATACCAAA	NA	False	NA	NA	False	NA	NA	NA	118207168	118208824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118207200_118208800
ES.31787.1	chr7	-	178	1	Intergenic	novelGene_26066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACCTAATTT	NA	False	NA	NA	False	NA	NA	NA	118216804	118216626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_118216600_118216800
ES.31788.1	chr7	-	180	1	Intergenic	novelGene_26067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	118220217	118220037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_118220000_118220200
ES.31789.1	chr7	+	171	1	Intergenic	novelGene_26068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATACAAAT	NA	False	NA	NA	False	NA	NA	NA	118302098	118302269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118302100_118302300
ES.3179.1	chr10	-	181	1	Intergenic	novelGene_2493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTTCCTAGGAATC	NA	False	NA	NA	False	NA	NA	NA	77118233	77118052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77118100_77118200
ES.31790.1	chr7	-	4698	6	NNC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	195.512045664711	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118304998	118287767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118295473_118295766_118297954_118304612
ES.31790.10	chr7	-	1581	7	NNC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	32	-15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	226.049896163558	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGAGGGCAAACTGTG	NA	False	NA	-12	True	AATAAA	-13	NA	118304939	118287782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118288374_118290107_118290184_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ES.31790.2	chr7	-	1312	5	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	61	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	217.18813848827	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTACTGATCTTCT	NA	False	NA	0	True	AATAAA	-25	NA	118304910	118287770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118304612
ES.31790.3	chr7	-	1674	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	-96	4	-96	-4	multi-exon	FALSE	canonical	3	428	junction_5	40.804901666344	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTGTACTGATCTTC	NA	False	NA	-1	True	AATAAA	-24	NA	118305097	118287771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ES.31790.4	chr7	-	3988	5	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	-2	-10	intron_retention	FALSE	canonical	3	428	junction_4	45.5137341909011	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCAAACTGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	118304985	118287777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ES.31790.5	chr7	-	4915	5	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	39	-11	intron_retention	FALSE	canonical	3	428	junction_4	41.8232889667946	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGCAAACTGTGTACT	NA	False	NA	-8	True	AATAAA	-17	NA	118304932	118287778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118297954_118304612
ES.31790.6	chr7	-	7291	4	NIC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	95	-11	intron_retention	FALSE	canonical	3	428	junction_3	47.4154217762768	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGCAAACTGTGTACT	NA	False	NA	-8	True	AATAAA	-17	NA	118304876	118287778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118291018_118293715_118293809_118294258_118297954_118304612
ES.31790.8	chr7	-	3515	6	NNC	ENSMUSG00000033917.16	novel	1582	6	NA	NA	4	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	195.512045664711	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGGGCAAACTGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	118304967	118287780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118295997_118297429_118297954_118304612
ES.31791.1	chr7	+	5091	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	-18	0	-18	0	multi-exon	TRUE	canonical	3	57	junction_14	14.3789970288458	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311756	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
ES.31791.10	chr7	+	4918	14	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	26.7477809730499	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATCTTGTTGGATCTCT	NA	False	NA	5	True	AATAAA	-15	NA	118311778	118336242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118334490
ES.31791.11	chr7	+	3473	14	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	8	-205	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	32.7473744374168	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTCTACAGTCACCCTT	NA	False	NA	NA	False	TATAAA	-17	NA	118311782	118334804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323680_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118334490
ES.31791.12	chr7	+	7791	14	ISM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	10	0	10	0	intron_retention	FALSE	canonical	3	69	junction_11	11.494789146165	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311784	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616
ES.31791.13	chr7	+	5076	16	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.4508667847737	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311793	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118322428_118322537_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
ES.31791.14	chr7	+	4952	15	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.7920056931909	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATCTTGTTGGATCTCT	NA	False	NA	5	True	AATAAA	-15	NA	118311813	118336242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314747_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
ES.31791.15	chr7	+	4949	15	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	28.8090121953785	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAATCTTGTTGGATC	NA	False	NA	2	True	AATAAA	-12	NA	118311821	118336239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330902_118330983_118331616_118331677_118334490
ES.31791.16	chr7	+	3435	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	57	-257	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	17.3487634094403	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGCCTTGTTTCTGA	NA	False	NA	NA	False	GATAAA	-15	NA	118311831	118334752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
ES.31791.17	chr7	+	2768	2	NIC	ENSMUSG00000033904.17	novel	4716	14	NA	NA	1708	0	intron_retention	FALSE	canonical	3	76	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTTGGATCTCTTT	1722	False	NA	7	True	AATAAA	-17	NA	118331181	118336244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118332196_118334490
ES.31791.3	chr7	+	4448	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	-9	634	-9	604	multi-exon	FALSE	canonical	3	57	junction_14	14.3789970288458	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGGAGATAAAGATTGT	NA	False	NA	NA	False	TTTAAA	-40	NA	118311765	118335613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
ES.31791.4	chr7	+	4995	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	17.3487634094403	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311766	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
ES.31791.5	chr7	+	5074	15	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.1846136922185	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311773	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317405_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
ES.31791.6	chr7	+	5506	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_11	11.8960206002868	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118332196_118334490
ES.31791.8	chr7	+	3770	9	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	4	-5913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4006428982641	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGTTTCTTACTCGTA	NA	False	NA	NA	False	AATAAA	-15	NA	118311778	118325772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118313002_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323680_118323809_118324525_118324683_118325225_118325366_118325722
ES.31791.9	chr7	+	5469	16	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	26.4813561250594	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311778	118336247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332596_118334490
ES.31792.1	chr7	-	1773	1	Antisense	novelGene_ENSMUSG00000033904.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTAGGCATACTATTT	NA	False	NA	NA	False	NA	NA	NA	118332833	118331060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_118331100_118332800
ES.31793.1	chr7	+	2435	17	NNC	ENSMUSG00000030982.20	novel	3018	30	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	153.20411221635	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118339490	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365653_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.10	chr7	+	1405	15	NNC	ENSMUSG00000030982.20	novel	1552	15	NA	NA	-4	-2970	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_14	144.575663404944	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCATACCACTCTCAGG	NA	False	NA	NA	False	AAAAAG	-15	NA	118339965	118380308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118380143
ES.31793.11	chr7	+	1630	10	NNC	ENSMUSG00000030982.20	novel	1552	15	NA	NA	-4	2049	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	187.237816693103	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCTTGTTGGTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	118339965	118367816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118366442_118367780
ES.31793.12	chr7	+	3996	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.692622947776	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339965	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118340159_118341054_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.13	chr7	+	2980	30	NIC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	118.104379558372	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATAGCAGTGTCTCGG	NA	False	NA	4	True	ATTAAA	-15	NA	118339965	118440706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.14	chr7	+	3005	30	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	148.062990740801	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118339965	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352121_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.15	chr7	+	9454	9	NNC	ENSMUSG00000030982.20	novel	1552	15	NA	NA	-4	-360	intron_retention	FALSE	non_canonical	0	0	junction_5	246.076588687343	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGCAGGAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	118339965	118365407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118349368_118349567_118352117_118353028_118353158_118359383_118364677_118364826
ES.31793.16	chr7	+	3838	28	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	147.130840495682	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAACACAACCCGTGT	NA	False	NA	NA	False	NA	NA	NA	118339965	118434374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409204_118411027_118411106_118412752_118412868_118425406_118425547_118432917
ES.31793.17	chr7	+	2834	29	NIC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	109.153725150751	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339965	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118339999_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.18	chr7	+	4036	9	NNC	ENSMUSG00000030982.20	novel	1102	9	NA	NA	-4	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	240.654705958558	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAGTAACTGTGCAAAA	NA	False	NA	NA	False	NA	NA	NA	118339965	118361359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118349368_118349567_118352117_118353028_118353158_118359383_118359469_118360988
ES.31793.2	chr7	+	3135	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	488	1474	-18	3	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCTCGGTGTGTGTTG	NA	False	NA	13	True	ATTAAA	-24	NA	118339936	118440715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.20	chr7	+	3362	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	143.391294978274	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339965	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118435832_118436093_118437335_118437455_118439777_118439925_118440418
ES.31793.21	chr7	+	3093	30	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	119.758188785623	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118339965	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118352021_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.22	chr7	+	4277	30	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	142.526723196768	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339965	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389362_118389397_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.23	chr7	+	3311	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	144.22213760025	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118339965	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118396956_118397168_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.24	chr7	+	3096	31	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	117.667521243356	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118339965	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352122_118353037_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.25	chr7	+	3241	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.63098569247	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	8	True	ATTAAA	-19	NA	118339965	118440710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345362_118345503_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.26	chr7	+	3540	31	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	114.142527861734	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339967	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118440305_118440358
ES.31793.28	chr7	+	1180	9	NIC	ENSMUSG00000030982.20	novel	1102	9	NA	NA	1	66	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	189.52226122543	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCTCGGGTGTCGTAA	NA	False	NA	NA	False	GATAAA	-13	NA	118339972	118361435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
ES.31793.29	chr7	+	3482	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.692622947776	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339972	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118340159_118340547_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.31	chr7	+	1105	9	NNC	ENSMUSG00000030982.20	novel	548	6	NA	NA	65	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.086804320105	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTTAATTTTCTTTCA	NA	False	NA	NA	False	GATAAA	-14	NA	118340036	118361296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118340127_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
ES.31793.32	chr7	+	3072	30	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	3368	1476	2845	1	3prime_fragment	FALSE	canonical	3	404	junction_21	65.8518316651133	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCGGTGTGTGT	NA	False	NA	11	True	ATTAAA	-22	NA	118342816	118440713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.33	chr7	+	3632	24	NIC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	1170	0	intron_retention	FALSE	canonical	3	404	junction_15	58.6640494633033	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118353055	118440712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.34	chr7	+	4531	2	Genic_Genomic	ENSMUSG00000109303.2	novel	577	1	NA	NA	-3064	1040	multi-exon	FALSE	canonical	0	0	junction_1	0	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118364175	118368856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_118364677_118364826
ES.31793.35	chr7	+	2290	23	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	2240	72	2240	-64	3prime_fragment	FALSE	canonical	3	404	junction_14	62.4747221609741	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTCTACTTGGCTATT	NA	False	NA	55	True	NA	NA	NA	118365586	118440638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.36	chr7	+	2477	23	NNC	ENSMUSG00000030982.20	novel	608	9	NA	NA	8620	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.1266785753	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATAGCAGTGTCTCGGT	NA	False	NA	5	True	ATTAAA	-16	NA	118371966	118440707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118372146_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.37	chr7	+	5144	5	NIC	ENSMUSG00000030982.20	novel	2934	24	NA	NA	6619	0	intron_retention	FALSE	canonical	3	489	junction_2	56.5287537453286	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	8	True	ATTAAA	-19	NA	118412832	118440710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_118412868_118425406_118425547_118432924_118437455_118439777_118439925_118440418
ES.31793.38	chr7	+	957	6	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-653	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.854117421187	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCGGTGTGTGT	NA	False	NA	11	True	ATTAAA	-22	NA	118423144	118440713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118423235_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.39	chr7	+	913	6	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	109	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.854117421187	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	False	NA	7	True	ATTAAA	-18	NA	118425035	118440709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118425086_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.4	chr7	+	4635	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	506	-44	0	44	multi-exon	FALSE	canonical	3	302	junction_1	75.0223744403406	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATCCTTTGTACGT	NA	False	NA	NA	False	NA	NA	NA	118339954	118442233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.40	chr7	+	2174	2	ISM	ENSMUSG00000030982.20	ENSMUST00000175952.2	823	6	16110	-2053	14981	386	3prime_fragment	FALSE	canonical	3	648	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTTACTGTCTTGAC	NA	False	NA	NA	False	NA	NA	NA	118439907	118442575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_118439925_118440418
ES.31793.5	chr7	+	926	9	ISM	ENSMUSG00000030982.20	ENSMUST00000129334.8	1552	15	0	17516	0	-5	5prime_fragment	FALSE	canonical	3	302	junction_1	101.623616226741	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACGTGTTTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	118339954	118365762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587
ES.31793.6	chr7	+	3105	31	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	117.650749631649	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCAGTGTCTCGGTGTG	NA	False	NA	8	True	ATTAAA	-19	NA	118339955	118440710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399666_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.7	chr7	+	1015	10	NNC	ENSMUSG00000030982.20	novel	1552	15	NA	NA	7	2371	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	186.698079367481	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCAGAGTCATTTGACT	NA	False	NA	NA	False	NA	NA	NA	118339961	118368138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118367927
ES.31793.8	chr7	+	2985	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	513	1599	7	68	multi-exon	FALSE	canonical	3	302	junction_1	75.0223744403406	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTTTTTGTTATTTT	NA	False	NA	7	True	NA	NA	NA	118339961	118440590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31793.9	chr7	+	3199	32	NNC	ENSMUSG00000030982.20	novel	5097	31	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	144.581213742746	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCAGTGTCTCGGTGTGT	NA	False	NA	9	True	ATTAAA	-20	NA	118339965	118440711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118407246_118407344_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ES.31794.1	chr7	-	175	1	Intergenic	novelGene_26069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	118342662	118342487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_118342500_118342700
ES.31795.1	chr7	-	5091	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	300	-9	-14	9	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGAATGTGTGTGTT	NA	False	NA	-8	True	AATAAA	-25	NA	118454921	118441435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.10	chr7	-	5021	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454906	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449906_118451621_118452564_118454845
ES.31795.11	chr7	-	4946	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454906	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
ES.31795.13	chr7	-	4409	2	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	2680	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118452156	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118451625
ES.31795.14	chr7	-	4988	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	16	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	268.622411574314	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454891	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118447671_118447798_118451625_118452564_118454845
ES.31795.15	chr7	-	4006	7	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-15	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.888544110789	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454869	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442803_118442883_118442976_118443923_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.16	chr7	-	3661	8	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	293.202862140442	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454907	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118442976_118443923_118444096_118444462_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.17	chr7	-	4517	5	NNC	ENSMUSG00000030980.18	novel	4884	5	NA	NA	22	5	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	254.500859527036	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454885	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118452111_118452564_118454845
ES.31795.18	chr7	-	4965	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-26	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.709015703938	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454880	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442803_118442883_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.19	chr7	-	3950	7	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-23	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	284.210993610185	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454877	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118442976_118443923_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.2	chr7	-	5033	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTGAATGTGTGTGT	NA	False	NA	-9	True	AATAAA	-24	NA	118454912	118441436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.21	chr7	-	5205	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	277.541438347502	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454852	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454610
ES.31795.22	chr7	-	4586	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	318	-20	1	5	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454906	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ES.31795.23	chr7	-	5252	5	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	302.960806045931	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454851	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454610
ES.31795.24	chr7	-	3585	8	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-26	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	274.588374681457	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTCTTTTGAATGTGT	NA	False	NA	-13	True	AATAAA	-20	NA	118454880	118441440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118442976_118443923_118444096_118444462_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.26	chr7	-	5103	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.492152521364	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454885	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118453407_118453511_118454845
ES.31795.27	chr7	-	4972	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.810558813857	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454906	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.29	chr7	-	4952	4	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	263.654234852307	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454906	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118451625_118452564_118454845
ES.31795.3	chr7	-	4516	4	NNC	ENSMUSG00000030980.18	novel	958	4	NA	NA	2765	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	289.540248593448	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118452071	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447671_118447798_118449843_118449906_118451621
ES.31795.30	chr7	-	5173	6	NIC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	291.615774607616	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454907	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118453407_118453511_118454845
ES.31795.31	chr7	-	4514	4	FSM	ENSMUSG00000030980.18	ENSMUST00000126792.9	3253	4	309	-1570	1	2	multi-exon	FALSE	canonical	0	0	junction_2	268.622411574314	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454906	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118452111_118452564_118454845
ES.31795.32	chr7	-	4931	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.245134075981	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454897	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442803_118442883_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.33	chr7	-	4466	4	NNC	ENSMUSG00000030980.18	novel	3253	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	263.654234852307	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454906	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118452111_118452564_118454845
ES.31795.34	chr7	-	4925	4	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	275.587050171488	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAGTCTTTTGAATGT	NA	False	NA	-15	True	AATAAA	-18	NA	118454891	118441442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118449843_118449906_118451621_118452564_118454845
ES.31795.35	chr7	-	6639	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	29	junction_1	251.158689875545	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454862	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118445318_118447671_118447798_118449843_118452564_118454845
ES.31795.36	chr7	-	4941	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	297.185867766285	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454906	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452034_118452111_118452564_118454845
ES.31795.37	chr7	-	5045	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	259.857653341209	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454862	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118453440_118453511_118454845
ES.31795.39	chr7	-	6733	3	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	2900	0	intron_retention	FALSE	canonical	0	0	junction_2	332.5	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118451936	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118447798_118449843_118449913_118451625
ES.31795.42	chr7	-	4966	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	315.088082922855	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454888	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447754_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.43	chr7	-	3623	8	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.286560681714	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454906	118441444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442803_118442883_118442976_118443923_118444096_118444462_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.45	chr7	-	5313	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.526648726709	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAAATATAGTCTTTTGA	NA	False	NA	-19	True	AATAAA	-14	NA	118454851	118441446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118452708_118452777_118454610
ES.31795.46	chr7	-	4962	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	105	1	-90	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACACAAGCTGTGTGTG	NA	False	NA	-122	True	NA	NA	NA	118454906	118441549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.47	chr7	-	4710	3	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-23	-118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	295.5	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTAACTCTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	118454877	118441577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118451625_118452564_118454845
ES.31795.48	chr7	-	4759	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	-290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	263.543639650059	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	118454906	118441749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447671_118447798_118449843_118449906_118451621_118452564_118454845
ES.31795.49	chr7	-	4700	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	15	-290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	118454892	118441749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.50	chr7	-	4556	3	NNC	ENSMUSG00000030980.18	novel	3253	4	NA	NA	15	-291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	295.5	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	118454892	118441750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118451621_118452564_118454845
ES.31795.51	chr7	-	4761	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	306	1	-291	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	118454906	118441750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.52	chr7	-	4633	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	-26	-296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.810558813857	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTCTTTGTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	118454880	118441755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.53	chr7	-	4390	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	677	1	-662	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCATTCTGGGTTC	NA	False	NA	NA	False	AATAAA	-27	NA	118454906	118442121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.55	chr7	-	3896	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	318	670	1	-670	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCACCATAGTGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	118454906	118442129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ES.31795.56	chr7	-	4332	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	-673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAACAGCACCATAGTGC	NA	False	NA	NA	False	AATAAA	-16	NA	118454907	118442132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.57	chr7	-	3961	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-12	497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGCATCCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	118454919	118442515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.58	chr7	-	4008	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	302	1072	-12	496	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGAGGCATCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	118454919	118442516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.59	chr7	-	3513	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	311	1558	-3	10	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGTTGTTGTTTTTTT	NA	False	NA	0	True	ATTAAA	-27	NA	118454910	118443002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.6	chr7	-	3982	7	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	287.783917780917	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454893	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442803_118442883_118442976_118443923_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.60	chr7	-	2347	2	NIC	ENSMUSG00000030980.18	novel	3253	4	NA	NA	-26	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTGTTGTTGTTGTTTT	NA	False	NA	-3	True	ATTAAA	-24	NA	118454880	118443005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118454845
ES.31795.61	chr7	-	6692	1	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	5137	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATTGTTGTTGTTGTT	NA	False	NA	-5	True	ATTAAA	-22	NA	118449699	118443007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118443000_118449700
ES.31795.63	chr7	-	3004	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	332	1548	15	5	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATTGTTGTTGTTGTT	NA	False	NA	-5	True	ATTAAA	-22	NA	118454892	118443007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ES.31795.64	chr7	-	3348	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-23	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTATTGTTGTTGTTGT	NA	False	NA	-6	True	ATTAAA	-21	NA	118454877	118443008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
ES.31795.66	chr7	-	4332	2	ISM	ENSMUSG00000030980.18	ENSMUST00000126792.9	3253	4	5520	-3	5141	3	3prime_fragment	FALSE	canonical	3	546	junction_1	0	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATTGTTGTTGTTG	NA	False	NA	-7	True	ATTAAA	-20	NA	118449695	118443009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_118445318_118447671
ES.31795.67	chr7	-	3462	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.709015703938	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATTGTTGTTGTTG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454906	118443009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118444529_118444568_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.68	chr7	-	3683	5	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	302.960806045931	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTATTGTTGTTGTTG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454852	118443009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454610
ES.31795.7	chr7	-	3939	2	NIC	ENSMUSG00000030980.18	novel	3253	4	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454906	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118454845
ES.31795.70	chr7	-	3289	3	NIC	ENSMUSG00000030980.18	novel	3253	4	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	295.5	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTATTATTGTTGTTG	NA	False	NA	-10	True	ATTAAA	-17	NA	118454891	118443012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118451625_118452564_118454845
ES.31795.71	chr7	-	3448	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCTATTATTATTGTT	NA	False	NA	-14	True	ATTAAA	-13	NA	118454907	118443016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.72	chr7	-	3380	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	315.088082922855	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGCTGCTATTATTATT	NA	False	NA	-17	True	ATTAAA	-10	NA	118454877	118443019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447754_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.73	chr7	-	3089	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	3	-542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	277.541438347502	635	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTTACGGGTGGTAGA	NA	False	NA	NA	False	NA	NA	NA	118454851	118443554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454610
ES.31795.74	chr7	-	1775	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	1	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACCCAGAGTCACTCA	NA	False	NA	0	True	ATTAAA	-39	NA	118454906	118444688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.75	chr7	-	1820	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	309	3253	-5	26	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGAGTACATCACCCAG	NA	False	NA	-9	True	AATAAA	-39	NA	118454912	118444697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.76	chr7	-	2038	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.526648726709	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCACCTTCCGTTAAG	NA	False	NA	-33	True	AATAAA	-15	NA	118454851	118444721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118452708_118452777_118454610
ES.31795.77	chr7	-	1673	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	324	3385	10	-106	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGGAGGGTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	118454897	118444829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.79	chr7	-	1516	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-32	-257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTTGATCAGTTGCA	NA	False	NA	-2	True	ATTAAA	-25	NA	118454939	118444980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.8	chr7	-	4013	7	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	15	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	295.165302086061	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	False	NA	-12	True	AATAAA	-21	NA	118454892	118441439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118442787_118442883_118442976_118443923_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.80	chr7	-	1531	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	315	3536	1	-257	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTTGATCAGTTGCA	NA	False	NA	-2	True	ATTAAA	-25	NA	118454906	118444980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ES.31795.81	chr7	-	1355	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	-7	-262	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATTTCTTGATCAG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454861	118444985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
ES.31795.82	chr7	-	1441	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	1	-262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	296.709015703938	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATTTCTTGATCAG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454906	118444985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445109_118445192_118445318_118447671_118447798_118449843_118449913_118451626_118452564_118454845
ES.31795.83	chr7	-	1041	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	317	3526	0	-262	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATTTCTTGATCAG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454907	118444985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ES.31795.84	chr7	-	1524	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	263.543639650059	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCATTTCTTGATCAG	NA	False	NA	-7	True	ATTAAA	-20	NA	118454907	118444985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447671_118447798_118449843_118449906_118451621_118452564_118454845
ES.31795.85	chr7	-	1517	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	122	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	277.541438347502	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAACTGCATTTCTTGA	NA	False	NA	-11	True	ATTAAA	-16	NA	118454714	118444989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454610
ES.31796.1	chr7	+	2888	1	FSM	ENSMUSG00000073856.12	ENSMUST00000208658.2	2891	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGTAGTGGTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	118454974	118457862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_118455000_118457900
ES.31797.1	chr7	-	3451	1	Antisense	novelGene_ENSMUSG00000073856.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	733	False	NA	NA	False	NA	NA	NA	118537125	118533674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_118533700_118537100
ES.31798.1	chr7	-	4527	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	-4	-5	-4	5	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCGTGGTAGCTTGTCAG	NA	False	NA	2	True	AATAAA	-20	NA	118594438	118571264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ES.31798.10	chr7	-	6944	2	ISM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	37	5790	37	-3049	5prime_fragment	FALSE	canonical	3	81	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTGTTTCAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	118594397	118577059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_118583869_118594262
ES.31798.3	chr7	-	4320	4	NNC	ENSMUSG00000008734.10	novel	4518	4	NA	NA	36	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.0364889159224	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCGTGGTAGCTTGTC	NA	False	NA	0	True	AATAAA	-18	NA	118594398	118571266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118574427_118575735_118575894_118582837_118583759_118594317
ES.31798.4	chr7	-	3750	5	NNC	ENSMUSG00000008734.10	novel	4518	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	32.8671568590896	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGATGCGTGGTAGCTT	NA	False	NA	-3	True	AATAAA	-15	NA	118594438	118571269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_118574427_118575735_118575894_118582837_118582965_118583736_118583869_118594262
ES.31798.6	chr7	-	2929	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	-14	1603	-14	-641	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGTCTCTGCTGTGTCC	NA	False	NA	-4	True	AATAAA	-18	NA	118594448	118572872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ES.31798.8	chr7	-	2648	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	5	1865	5	545	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTTTGGCCAGCATAA	NA	False	NA	NA	False	ATTAAA	-16	NA	118594429	118573134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ES.31798.9	chr7	-	1442	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	8	3068	8	-327	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTGGCTGTGTCTTTC	NA	False	NA	-1	True	NA	NA	NA	118594426	118574337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ES.31799.1	chr7	-	3366	2	Intergenic	novelGene_26070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTTGGTGACTGT	NA	False	NA	NA	False	NA	NA	NA	118622949	118608193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_118611350_118622739
ES.31799.2	chr7	-	750	2	Intergenic	novelGene_26071	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTTGCCTTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	118622950	118610810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_118611350_118622739
ES.318.1	chr1	-	4595	10	NIC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	2.62466929133727	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	-1	True	AATAAA	-15	NA	37759124	37650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37651481_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
ES.318.3	chr1	-	4175	10	NNC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	-21736	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2.98142396999972	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	5465	False	NA	-1	True	AATAAA	-15	NA	37686059	37650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37651481_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37686005
ES.318.5	chr1	-	4541	10	NNC	ENSMUSG00000026090.17	novel	4634	10	NA	NA	-40609	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.14269680527354	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTCTGCTCTGTG	7829	False	NA	-8	True	AATAAA	-8	NA	37704932	37650764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37651478_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37704502
ES.3180.1	chr10	+	229	1	Intergenic	novelGene_2495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAATATCAAAACAGAAG	NA	False	NA	NA	False	NA	NA	NA	77179795	77180024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77179800_77180000
ES.31800.1	chr7	+	747	4	Intergenic	novelGene_26072	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGCCATTTATTGACAT	3319	False	NA	NA	False	NA	NA	NA	118637078	118677279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_118637135_118643306_118643354_118643921_118644076_118676789
ES.31801.1	chr7	-	2801	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	20	-132	-14	132	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGCCTCATTGTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	119320001	119314183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ES.31801.2	chr7	-	2710	4	FSM	ENSMUSG00000109233.2_ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	-21	0	-21	0	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320042	119314315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ES.31801.3	chr7	-	4483	2	FSM	ENSMUSG00000030942.9	ENSMUST00000209175.2	744	2	-20	-3719	14	0	multi-exon	FALSE	canonical	3	927	junction_1	0	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320007	119314315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119318525_119319733
ES.31801.4	chr7	-	3533	3	NIC	ENSMUSG00000030942.9	novel	2689	4	NA	NA	12	0	intron_retention	FALSE	canonical	3	902	junction_1	12.5	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320009	119314315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119316293_119317244_119318525_119319733
ES.31801.5	chr7	-	3866	3	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	29	3	-5	-3	intron_retention	FALSE	canonical	3	902	junction_1	57	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCATTCTTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	119319992	119314318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_119316293_119317244_119317494_119318349
ES.31801.6	chr7	-	2658	4	NNC	ENSMUSG00000030942.9	novel	2689	4	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	459.408556975403	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCATTCTTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	119319995	119314318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119316287_119317240_119317494_119318349_119318525_119319733
ES.31801.8	chr7	-	1182	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	14	1493	14	-1493	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCACAGTCCCCGTTGTC	NA	False	NA	NA	False	NA	NA	NA	119320007	119315808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ES.31802.1	chr7	+	2340	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-222	-1146	-20	19	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTTGGGAATGACAC	NA	False	NA	NA	False	NA	NA	NA	119339128	119341468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119339100_119341500
ES.31802.2	chr7	+	1599	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-221	-406	-19	406	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTGTGAACAATTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	119339129	119340728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119339100_119340700
ES.31802.3	chr7	+	2207	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	37	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119339769_119339873
ES.31802.4	chr7	+	1791	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-217	-602	-15	-525	mono-exon	FALSE	NA	NA	NA	NA	NA	618	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTCCTTCCTAAAGCC	NA	False	NA	NA	False	ATTAAA	-19	NA	119339133	119340924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119339100_119340900
ES.31802.5	chr7	+	1470	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	-15	-18	-15	18	multi-exon	FALSE	canonical	3	469	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119340294_119341157
ES.31802.6	chr7	+	2232	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-15	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119339659_119339736
ES.31802.7	chr7	+	2182	2	NNC	ENSMUSG00000100153.3	novel	1437	2	NA	NA	-15	18	intron_retention	FALSE	canonical	3	208	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339133	119341467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119339946_119340097
ES.31803.1	chr7	+	181	1	Intergenic	novelGene_26073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCTGTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	119344551	119344732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_119344600_119344700
ES.31804.1	chr7	+	1966	16	NNC	ENSMUSG00000030924.17	novel	2019	14	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.1603515336151	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCAAAACATTTCCTC	NA	False	NA	6	True	AATAAA	-6	NA	119393317	119448155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393435_119393598_119393726_119398787_119398901_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426600_119431893_119431997_119433486_119433625_119442464_119442558_119443070_119443288_119447954
ES.31804.10	chr7	+	5885	13	NNC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	194	2	intron_retention	FALSE	canonical	1	1	junction_10	13.804940741955	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCCTCTTAGATGTGG	NA	False	NA	19	True	AATAAA	-19	NA	119393567	119448168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393726_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119430774_119431893_119431999_119433486_119433625_119443070_119443288_119444605_119444725_119447954
ES.31804.11	chr7	+	3830	6	NNC	ENSMUSG00000030924.17	novel	527	3	NA	NA	2931	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.5654658358408	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTCCTCTTAG	NA	False	NA	13	True	AATAAA	-13	NA	119427704	119448162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119430774_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119447954
ES.31804.12	chr7	+	9429	1	NIC	ENSMUSG00000030924.17	novel	1966	13	NA	NA	-4350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	False	NA	17	True	AATAAA	-17	NA	119438737	119448166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_119438700_119448200
ES.31804.13	chr7	+	715	2	ISM	ENSMUSG00000030924.17	ENSMUST00000208789.2	527	3	1130	0	789	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTCCTCTTAG	NA	False	NA	13	True	AATAAA	-13	NA	119444217	119448162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_119444725_119447954
ES.31804.2	chr7	+	6511	16	NNC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	-24	0	intron_retention	FALSE	canonical	2	8	junction_1	10.3721850264167	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	False	NA	17	True	AATAAA	-17	NA	119393317	119448166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393726_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119430774_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ES.31804.3	chr7	+	2290	15	NNC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4980033759194	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCAAAACATTTCCTC	NA	False	NA	6	True	AATAAA	-6	NA	119393318	119448155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393817_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426600_119427314_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ES.31804.4	chr7	+	1615	11	NIC	ENSMUSG00000030924.17	novel	2019	14	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	12.8124939024376	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACATTTCCTCCTCTT	NA	False	NA	11	True	AATAAA	-11	NA	119393319	119448160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_119393726_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426600_119431893_119431999_119433486_119433625_119447954
ES.31804.5	chr7	+	2749	21	NNC	ENSMUSG00000030924.17	novel	2019	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.4100765509323	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTCCTCTTAG	NA	False	NA	13	True	AATAAA	-13	NA	119393344	119448162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393435_119393598_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426603_119427314_119427430_119430524_119430774_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ES.31804.6	chr7	+	6713	18	NNC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	3	-6	intron_retention	FALSE	canonical	3	10	junction_11	9.48063040842625	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCAAAACATTTCCTC	NA	False	NA	6	True	AATAAA	-6	NA	119393344	119448155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119430774_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ES.31804.7	chr7	+	1821	13	NIC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	13.4192544088295	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTTCCTCCTCTTAG	NA	False	NA	13	True	AATAAA	-13	NA	119393357	119448162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119424758_119424862_119426525_119426600_119431893_119431999_119433486_119433625_119447954
ES.31804.8	chr7	+	2652	19	NIC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	9.76703955804394	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	False	NA	17	True	AATAAA	-17	NA	119393357	119448166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119426600_119427314_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ES.31804.9	chr7	+	6432	17	NNC	ENSMUSG00000030924.17	novel	2492	20	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_11	11.5662156192075	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCTCTTAGATGT	NA	False	NA	17	True	AATAAA	-17	NA	119393374	119448166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119393726_119398787_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424862_119426525_119430700_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119444605_119444725_119447954
ES.31805.1	chr7	+	2314	1	Intergenic	novelGene_26074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCGGGCAGTGGCACG	NA	False	NA	NA	False	NA	NA	NA	119475619	119477933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_119475600_119477900
ES.31806.1	chr7	+	1204	5	NNC	ENSMUSG00000030922.13	novel	752	5	NA	NA	-605	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.2142613857419	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATATTTGTTGTTTTGTT	NA	False	NA	6	True	TATAAA	-17	NA	119494478	119515973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119494582_119494874_119495114_119509026_119509186_119513395_119513489_119515363
ES.31806.2	chr7	+	1025	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	-8	-81	1	-2	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTTGTTGTTTTGTTG	NA	False	NA	7	True	TATAAA	-18	NA	119495084	119515974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
ES.31806.3	chr7	+	1210	5	NIC	ENSMUSG00000030922.13	novel	752	5	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.0301567339896	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATATTTGTTGTTTTGTT	NA	False	NA	6	True	TATAAA	-17	NA	119495096	119515973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_119495114_119499333_119499532_119508893_119509186_119513395_119513489_119515363
ES.31806.4	chr7	+	1079	5	FSM	ENSMUSG00000030922.13	ENSMUST00000054440.11	752	5	-8	-319	4	-1	multi-exon	FALSE	canonical	3	10	junction_1	26.343879744639	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTTGTTTTGTTGA	NA	False	NA	8	True	TATAAA	-19	NA	119495096	119515975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119495114_119499333_119499532_119509026_119509186_119513395_119513489_119515363
ES.31806.5	chr7	+	526	3	NNC	ENSMUSG00000030922.13	novel	456	3	NA	NA	-65	-15595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGGTTTTAAAGCTAGA	NA	False	NA	NA	False	ATTAAA	-13	NA	119495449	119499953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119495476_119499333_119499532_119499651
ES.31807.1	chr7	-	3708	11	NNC	ENSMUSG00000030929.18	novel	1241	10	NA	NA	2	-954	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.8001436778643	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGACTTTGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	119393203	119368855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119371568_119371767_119371851_119373618_119373756_119385957_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.11	chr7	-	4084	10	Fusion	ENSMUSG00000048787.14_ENSMUSG00000030929.18	novel	3564	9	NA	NA	52	2	intron_retention	FALSE	canonical	0	0	junction_8	24.7750372176472	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTAGAACATCAGATT	NA	False	NA	-15	True	AATAAA	-21	NA	119494916	119383064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119458602_119459139_119494780
ES.31807.12	chr7	-	3553	8	NIC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	53	junction_1	9.33503385868831	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATGTAGAACATCAG	NA	False	NA	-18	True	AATAAA	-18	NA	119393202	119383067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391722_119393140
ES.31807.14	chr7	-	3539	10	NNC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	10	-4	intron_retention	FALSE	canonical	0	0	junction_1	35.69555769989	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACATGTAGAACAT	NA	False	NA	-21	True	AATAAA	-15	NA	119393172	119383070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385957_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119392072_119392170_119393140
ES.31807.15	chr7	-	4179	8	NIC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	2	-4	intron_retention	FALSE	canonical	3	53	junction_1	9.23834069384271	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACATGTAGAACAT	NA	False	NA	-21	True	AATAAA	-15	NA	119393203	119383070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.16	chr7	-	5786	7	NIC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	2	-4	intron_retention	FALSE	canonical	2	5	junction_2	27.339938226379	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACATGTAGAACAT	NA	False	NA	-21	True	AATAAA	-15	NA	119393203	119383070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119385768_119385961_119386051_119386956_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.17	chr7	-	4430	4	NNC	ENSMUSG00000030929.18	novel	3286	7	NA	NA	-1589	-4	intron_retention	FALSE	canonical	0	0	junction_3	23.8932812499432	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACATGTAGAACAT	NA	False	NA	-21	True	AATAAA	-15	NA	119388764	119383070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385961_119386051_119386956_119387058_119387221
ES.31807.18	chr7	-	3388	8	NIC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	1	-4	intron_retention	FALSE	canonical	2	5	junction_2	25.7705733149185	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACATGTAGAACAT	NA	False	NA	-21	True	AATAAA	-15	NA	119393204	119383070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119385768_119385961_119386051_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.19	chr7	-	3498	9	NNC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_6	25.1545224562105	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAGACATGTAGAACA	NA	False	NA	-22	True	AATAAA	-14	NA	119393207	119383071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390478_119391487_119391572_119391653_119391722_119393140
ES.31807.2	chr7	-	3702	11	NNC	ENSMUSG00000030929.18	novel	1241	10	NA	NA	2	-955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.9438450920321	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGACTTTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	119393203	119368856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119371568_119371767_119371843_119372998_119373148_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391567_119391653_119391722_119393140
ES.31807.21	chr7	-	6944	3	NIC	ENSMUSG00000030929.18	novel	6025	7	NA	NA	1	-739	intron_retention	FALSE	canonical	3	81	junction_2	0.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTGGCGACATTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	119393204	119383805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119390452_119391487_119391722_119393140
ES.31807.22	chr7	-	2731	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	74	759	-2	-746	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCAGCATCTGGCGAC	NA	False	NA	NA	False	AATAAA	-8	NA	119393207	119383812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.23	chr7	-	2552	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	78	934	2	-921	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTAGGTAAATATTC	NA	False	NA	NA	False	AATAAA	-13	NA	119393203	119383987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.24	chr7	-	2414	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	78	1072	2	-1059	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATTTTTACAAACC	NA	False	NA	NA	False	CATAAA	-12	NA	119393203	119384125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.25	chr7	-	1175	5	NNC	ENSMUSG00000048787.14	novel	353	2	NA	NA	-55	21754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.48746859276655	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTTCTCTCTTGCAT	NA	False	NA	NA	False	CATAAA	-21	NA	119494821	119430264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119430675_119431866_119431979_119458602_119459139_119494293_119494370_119494780
ES.31807.26	chr7	-	6496	1	Genic_Genomic	ENSMUSG00000048787.14	novel	NA	NA	NA	NA	6581	4068	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAACAAAGACA	4827	False	NA	NA	False	NA	NA	NA	119454446	119447950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_119448000_119454400
ES.31807.27	chr7	-	5818	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	154	13	-48	-13	multi-exon	FALSE	canonical	3	85	junction_2	16	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAAACACCCATGAT	NA	False	NA	NA	False	AATAAA	-29	NA	119494814	119452031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.28	chr7	-	5646	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	1	338	1	-338	multi-exon	FALSE	canonical	3	85	junction_2	16	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTATTCTGAGGT	NA	False	NA	21	True	AATAAA	-43	NA	119494967	119452356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.29	chr7	-	5556	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	18	-338	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTATTCTGAGGT	NA	False	NA	21	True	AATAAA	-43	NA	119494950	119452356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494853
ES.31807.3	chr7	-	3554	10	FSM	ENSMUSG00000030929.18	ENSMUST00000063902.14	1241	10	-14	-2299	1	-960	multi-exon	FALSE	canonical	1	2	junction_1	31.084115271666	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGTTGACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	119393204	119368861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119371568_119371767_119371843_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.30	chr7	-	5794	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	-17	-338	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	52.0917993119412	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTATTCTGAGGT	NA	False	NA	21	True	AATAAA	-43	NA	119494985	119452356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494780
ES.31807.32	chr7	-	5469	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-5	-4834	-5	-363	multi-exon	FALSE	canonical	3	12	junction_2	52.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTTCTGCAGAAAACA	NA	False	NA	-4	True	AATAAA	-18	NA	119461060	119452381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119461025
ES.31807.33	chr7	-	5540	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	-50	-369	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	53.0471488394994	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGATATTTCTGCAG	NA	False	NA	-10	True	AATAAA	-12	NA	119494816	119452387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494293_119494370_119494780
ES.31807.34	chr7	-	5378	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	152	455	-50	-455	multi-exon	FALSE	canonical	3	85	junction_2	16	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTCTCTTTTATGTCT	NA	False	NA	-96	True	NA	NA	NA	119494816	119452473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.35	chr7	-	4513	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	0	1472	0	-1472	multi-exon	FALSE	canonical	3	85	junction_2	16	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGATGTGTTTATTGG	NA	False	NA	NA	False	GATAAA	-23	NA	119494968	119453490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.36	chr7	-	3998	3	NIC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	-4	1121	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	58.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGTCTTCCTTGCCA	NA	False	NA	NA	False	GATAAA	-22	NA	119461059	119453907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119457280_119458602_119459139_119460969
ES.31807.37	chr7	-	4095	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	0	1890	0	1120	multi-exon	FALSE	canonical	3	85	junction_2	16	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTAGTCTTCCTTGCC	NA	False	NA	NA	False	GATAAA	-21	NA	119494968	119453908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.38	chr7	-	3031	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	-3	2957	-3	53	multi-exon	FALSE	canonical	3	85	junction_2	16	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGATTAGTCTACCCC	NA	False	NA	46	True	ATTAAA	-15	NA	119494971	119454975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.39	chr7	-	3097	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	35	27	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	52.0917993119412	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATTAAATATTTGGA	NA	False	NA	20	True	AATAAA	-43	NA	119494933	119455001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494780
ES.31807.4	chr7	-	3111	1	Genic_Genomic	ENSMUSG00000030929.18	novel	NA	NA	NA	NA	15203	-960	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAGTTGACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	119371972	119368861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_119368900_119372000
ES.31807.40	chr7	-	3384	4	NNC	ENSMUSG00000048787.14	novel	3072	3	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	53.2937352999602	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATTAAATATTTGGA	NA	False	NA	20	True	AATAAA	-43	NA	119494968	119455001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494293_119494370_119494474
ES.31807.41	chr7	-	2879	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	22	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.3716067751046	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATTAAATATTTGGA	NA	False	NA	20	True	AATAAA	-43	NA	119494946	119455001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119458664_119458764_119459139_119494780
ES.31807.42	chr7	-	2918	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	11	27	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	47.5	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTATTAAATATTTGGA	NA	False	NA	20	True	AATAAA	-43	NA	119494957	119455001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494853
ES.31807.43	chr7	-	2861	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-22	-2209	-22	22	multi-exon	FALSE	canonical	3	12	junction_2	52.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTGTCTATTAAATAT	NA	False	NA	15	True	AATAAA	-38	NA	119461077	119455006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119461025
ES.31807.44	chr7	-	3112	3	FSM	ENSMUSG00000048787.14	ENSMUST00000098080.9	3072	3	-11	-29	-11	22	multi-exon	FALSE	canonical	3	5	junction_2	56	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTGTCTATTAAATAT	NA	False	NA	15	True	AATAAA	-38	NA	119494777	119455006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494474
ES.31807.45	chr7	-	3113	3	NNC	ENSMUSG00000048787.14	novel	3072	3	NA	NA	-2	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAAGTGTCTATTAA	NA	False	NA	11	True	AATAAA	-34	NA	119494768	119455010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494460
ES.31807.46	chr7	-	2997	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	-45	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54.6890198201512	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATGAAAAAGTGTCTAT	NA	False	NA	8	True	AATAAA	-31	NA	119494811	119455013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119480584_119480749_119494780
ES.31807.47	chr7	-	4159	2	NIC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	-49	14	intron_retention	FALSE	canonical	3	85	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAATGAAAAAGTGTCTA	NA	False	NA	7	True	AATAAA	-30	NA	119494815	119455014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_119459139_119494780
ES.31807.48	chr7	-	3069	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	1094	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.5	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCTTGATACAATGAAAAA	NA	False	NA	0	True	AATAAA	-23	NA	119459933	119455021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119459658
ES.31807.49	chr7	-	3120	6	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.0521443583249	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATACTCTTGATACAA	NA	False	NA	-7	True	AATAAA	-16	NA	119494827	119455028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494293_119494370_119494474_119494555_119494780
ES.31807.5	chr7	-	1289	4	NNC	ENSMUSG00000030929.18	novel	973	9	NA	NA	467	-1010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.4512538072113	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTGGCTCTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	119386708	119372170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119373148_119373618_119373756_119385957_119386051_119386626
ES.31807.50	chr7	-	3026	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.7959106252511	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTATACTCTTGA	NA	False	NA	-12	True	AATAAA	-11	NA	119494967	119455033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494853
ES.31807.51	chr7	-	3045	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	53.0471488394994	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTATACTCTTGA	NA	False	NA	-12	True	AATAAA	-11	NA	119494967	119455033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119494293_119494370_119494780
ES.31807.52	chr7	-	2824	3	NNC	ENSMUSG00000048787.14	novel	5985	3	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTATACTCTTGA	NA	False	NA	-12	True	AATAAA	-11	NA	119494955	119455033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457147_119458602_119459139_119494780
ES.31807.53	chr7	-	2560	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	1	3424	1	-407	multi-exon	FALSE	canonical	3	85	junction_2	16	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATCTATATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	119494967	119455442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.54	chr7	-	2425	3	FSM	ENSMUSG00000048787.14	ENSMUST00000142120.2	630	3	-22	-1773	-22	-407	multi-exon	FALSE	canonical	3	12	junction_2	52.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATCTATATCCCTTT	NA	False	NA	NA	False	NA	NA	NA	119461077	119455442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119461025
ES.31807.55	chr7	-	2293	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	74	3618	74	-601	multi-exon	FALSE	canonical	3	85	junction_2	16	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGCCCACGTTGTCACT	NA	False	NA	NA	False	ATTAAA	-22	NA	119494894	119455636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494780
ES.31807.56	chr7	-	2405	4	NNC	ENSMUSG00000048787.14	novel	2917	4	NA	NA	15	-605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.7959106252511	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGCGCCCACGTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	119494953	119455640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119457280_119458602_119459139_119469637_119469768_119494853
ES.31807.57	chr7	-	1728	3	FSM	ENSMUSG00000048787.14	ENSMUST00000098080.9	3072	3	-11	1355	-11	157	multi-exon	FALSE	canonical	3	5	junction_2	56	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCAGTTTTGCATATT	NA	False	NA	NA	False	NA	NA	NA	119494777	119456390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119457280_119458602_119459139_119494474
ES.31807.6	chr7	-	3582	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	-13	-5	-13	1	multi-exon	FALSE	canonical	3	53	junction_1	8.7571399440685	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGTGTTTGATGCCT	NA	False	NA	1	True	AATAAA	-37	NA	119393294	119383048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.7	chr7	-	3575	10	NNC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	-2	1	intron_retention	FALSE	canonical	1	1	junction_6	30.7081040495988	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGTGTTTGATGCCT	NA	False	NA	1	True	AATAAA	-37	NA	119393207	119383048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119389733_119389814_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.8	chr7	-	3606	10	NNC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	10	1	intron_retention	FALSE	canonical	0	0	junction_4	31.3793987620328	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGTGTTTGATGCCT	NA	False	NA	1	True	AATAAA	-37	NA	119393172	119383048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119387221_119387368_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31807.9	chr7	-	3390	8	NNC	ENSMUSG00000030929.18	novel	3564	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	27.3533193896582	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGATTTGTGTGTTTGA	NA	False	NA	-4	True	AATAAA	-32	NA	119393203	119383053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_119385768_119385961_119386051_119386626_119386714_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ES.31808.1	chr7	+	3929	4	NNC	ENSMUSG00000030922.13	novel	5845	5	NA	NA	4960	11853	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGCAGATCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	119541140	119568039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119541428_119550768_119551393_119564633_119564799_119565186
ES.31809.1	chr7	+	1478	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	9	-3	9	3	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCTTTTTCTTCTA	NA	False	NA	8	True	ATTAAA	-17	NA	119701584	119720212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ES.31809.2	chr7	+	1420	6	NNC	ENSMUSG00000030917.14	novel	1395	6	NA	NA	11	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.3780153389379	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGAGCCTGTGCGATG	NA	False	NA	-62	True	AATAAA	-33	NA	119701628	119720142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119701739_119702123_119702180_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ES.31809.3	chr7	+	1497	5	NNC	ENSMUSG00000030917.14	novel	1484	5	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.4759526419165	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGTTTTCTTTTTCT	NA	False	NA	4	True	ATTAAA	-13	NA	119701743	119720208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_119701921_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ES.31809.4	chr7	+	173	1	Intergenic	novelGene_26075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATGTAAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	119709602	119709775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_119709600_119709800
ES.3181.1	chr10	-	6574	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	-26	1	-21	0	multi-exon	FALSE	canonical	2	18	junction_4	10.2024506859872	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATGGACATTTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	77254125	77126560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
ES.3181.10	chr10	-	176	1	Intergenic	novelGene_2494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAAGAGAAGGGA	3807	False	NA	NA	False	NA	NA	NA	77150526	77150350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77150400_77150500
ES.3181.11	chr10	-	564	4	FSM	ENSMUSG00000020262.16	ENSMUST00000150227.8	3289	4	-26	2751	1	-13	multi-exon	FALSE	canonical	3	17	junction_1	14.8398861930347	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAAGAAAACCTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	77254098	77161375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77161526_77161699_77161775_77195400_77195570_77253928
ES.3181.3	chr10	-	6564	11	FSM	ENSMUSG00000020262.16	ENSMUST00000098374.9	6584	11	18	2	13	0	multi-exon	FALSE	canonical	2	3	junction_4	12.5554768925756	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATGGACATTTTCCT	NA	False	NA	NA	False	AATAAA	-21	NA	77254086	77126561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148181_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
ES.3181.4	chr10	-	6782	12	NNC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	11.7894756260484	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGCATGGACATTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	77254117	77126563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77222022_77222242_77253928
ES.3181.5	chr10	-	5523	12	FSM	ENSMUSG00000020262.16	ENSMUST00000126073.8	6583	12	-42	1102	1	-1101	multi-exon	FALSE	canonical	1	1	junction_8	12.8352561973999	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGCTCTCTGTTTATT	NA	False	NA	NA	False	ATTAAA	-37	NA	77254103	77127662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161452_77161526_77161699_77161775_77195400_77195570_77253928
ES.3181.6	chr10	-	5469	12	NNC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	-9	-1120	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	11.152585587623	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCCATCGTTTCATAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	77254081	77127681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77243382_77243443_77253928
ES.3181.7	chr10	-	3036	11	FSM	ENSMUSG00000020262.16	ENSMUST00000098374.9	6584	11	5	3543	0	-3541	multi-exon	FALSE	canonical	2	3	junction_4	12.5554768925756	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGCACGAGAATATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	77254099	77130102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148181_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
ES.3181.8	chr10	-	6111	11	NIC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	1	-3543	intron_retention	FALSE	canonical	2	17	junction_8	10.7893465974544	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAGCACGAGAATATA	NA	False	NA	NA	False	AATAAA	-13	NA	77254098	77130104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77161526_77161699_77161775_77195400_77195570_77253928
ES.3181.9	chr10	-	2997	12	NNC	ENSMUSG00000020262.16	novel	6583	12	NA	NA	-12	-3639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.6490628137883	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATGAGATTTATAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	77254116	77130200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77130796_77131531_77131711_77139007_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161452_77161526_77161699_77161775_77195400_77195570_77253928
ES.31810.1	chr7	-	1284	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	94	5	94	-5	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCCTTTGACAACT	NA	False	NA	-4	True	AATAAA	-16	NA	119801240	119785607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
ES.31810.2	chr7	-	175	1	Intergenic	novelGene_26076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGACAGGGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	119795692	119795517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_119795500_119795700
ES.31811.1	chr7	+	1373	3	NIC	ENSMUSG00000051900.13	novel	3551	11	NA	NA	6	-47461	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTGTCTATGTGTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	120008875	120031461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120008990_120026352_120026481_120030330
ES.31811.2	chr7	+	3658	8	NIC	ENSMUSG00000051900.13	novel	3551	11	NA	NA	59	-20045	intron_retention	FALSE	canonical	0	0	junction_1	1.19522860933439	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTAGATTAAGTAACT	NA	False	NA	NA	False	NA	NA	NA	120008928	120058877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120008990_120030330_120030473_120032565_120032826_120035058_120035176_120035872_120035991_120038391_120038566_120052179_120052362_120056273
ES.31811.3	chr7	+	5161	1	Genic_Genomic	ENSMUSG00000051900.13	novel	NA	NA	NA	NA	-580	-53418	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTGTAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	120020343	120025504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_120020300_120025500
ES.31812.1	chr7	+	176	1	Intergenic	novelGene_26077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAAGCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	120228111	120228287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120228100_120228300
ES.31813.1	chr7	+	2082	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	-377	191	-377	-191	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAATAGAGTAATTTTT	NA	False	NA	78	True	ATTAAA	-14	NA	120234021	120258556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.10	chr7	+	3145	13	ISM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	53	48	-11	-48	intron_retention	FALSE	canonical	3	1087	junction_9	68.3940279231714	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACAGCCTGGATTTTGC	NA	False	NA	4	True	AATAAA	-15	NA	120234451	120258699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739
ES.31813.12	chr7	+	1555	13	NNC	ENSMUSG00000030884.13	novel	1896	14	NA	NA	-10	-198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	359.199766456247	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAACAATAATAGAGT	NA	False	NA	71	True	ATTAAA	-7	NA	120234452	120258549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253273_120256739_120256894_120258243
ES.31813.13	chr7	+	1599	14	NNC	ENSMUSG00000030884.13	novel	1896	14	NA	NA	-7	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	349.388121108314	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTTCTTCTTGCATT	NA	False	NA	14	True	AATAAA	-10	NA	120234455	120258492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242233_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.14	chr7	+	1568	14	NNC	ENSMUSG00000030884.13	novel	1896	14	NA	NA	-4	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	349.644180924605	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTTCTTGCATTCT	NA	False	NA	16	True	AATAAA	-12	NA	120234458	120258494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240916_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.18	chr7	+	2101	3	ISM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	19512	47	3408	-47	3prime_fragment	FALSE	canonical	3	1340	junction_1	23.5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGCCTGGATTTTGCC	NA	False	NA	5	True	AATAAA	-16	NA	120253910	120258700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120255401_120256739_120256894_120258243
ES.31813.19	chr7	+	444	3	NNC	ENSMUSG00000030884.13	novel	606	4	NA	NA	4864	-245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	670	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCATTCTTTCTAAGC	NA	False	NA	24	True	AATAAA	-20	NA	120255366	120258502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120255401_120256739_120256888_120258240
ES.31813.2	chr7	+	2286	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	-377	-13	-377	13	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTTCCTTCATTTGTG	NA	False	NA	35	True	AGTAAA	-27	NA	120234021	120258760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.4	chr7	+	1756	14	NNC	ENSMUSG00000030884.13	novel	1896	14	NA	NA	31	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	350.181170354726	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCCTGGATTTTGCCC	NA	False	NA	6	True	AATAAA	-17	NA	120234429	120258701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253266_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.7	chr7	+	1541	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	35	320	-29	-320	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTTAAA	NA	False	NA	18	True	AATGAA	-3	NA	120234433	120258427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ES.31813.9	chr7	+	1533	14	NNC	ENSMUSG00000030884.13	novel	1896	14	NA	NA	-17	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	350.181170354726	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTTCTTGCATTCT	NA	False	NA	16	True	AATAAA	-12	NA	120234445	120258494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253266_120253285_120255323_120255401_120256739_120256894_120258243
ES.31814.1	chr7	-	2049	2	FSM	ENSMUSG00000097343.3	ENSMUST00000180977.3	1812	2	55	-292	5	-7	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCACTGGTTGGCC	NA	False	NA	NA	False	AATAAA	-11	NA	120276738	120272665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_120274500_120276523
ES.31814.2	chr7	-	1759	2	FSM	ENSMUSG00000097343.3	ENSMUST00000180977.3	1812	2	52	1	2	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAACCACGTTGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	120276741	120272958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_120274500_120276523
ES.31814.3	chr7	-	1398	2	FSM	ENSMUSG00000097343.3	ENSMUST00000180977.3	1812	2	73	341	23	-341	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTGTCATGAAGTG	NA	False	NA	NA	False	NA	NA	NA	120276720	120273298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_120274500_120276523
ES.31815.1	chr7	+	3517	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-48	1362	-35	-779	multi-exon	FALSE	canonical	3	80	junction_2	55.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATGTTCTGTGTTGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	120276805	120332715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120277094_120325342_120325556_120329699
ES.31815.11	chr7	+	3887	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-78	-3464	-16	-313	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGCTGTCTTTTAGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	120276824	120333181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ES.31815.12	chr7	+	3191	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-74	-2772	-12	846	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTCAAATTTTGTCT	NA	False	NA	NA	False	TATAAA	-18	NA	120276828	120332489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ES.31815.13	chr7	+	1234	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-24	3621	-11	-248	multi-exon	FALSE	canonical	3	80	junction_2	55.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAATCTCTGTGTACAAA	NA	False	NA	NA	False	AATAGA	-43	NA	120276829	120330456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120277094_120325342_120325556_120329699
ES.31815.14	chr7	+	747	3	ISM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-73	3815	-11	-2	5prime_fragment	FALSE	canonical	3	73	junction_1	59	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTGAAGGCAGTCATTT	NA	False	NA	19	True	AATAAA	-25	NA	120276829	120325902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120276936_120277012_120277094_120325342
ES.31815.15	chr7	+	812	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208454.2	813	2	-13	14	-11	-5	multi-exon	FALSE	canonical	3	191	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATAACTTAGGTGA	NA	False	NA	7	True	AATAAA	-13	NA	120276829	120325890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120277094_120325342
ES.31815.16	chr7	+	4144	4	NNC	ENSMUSG00000046096.8	novel	812	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.3170195778386	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276840	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120276936_120277052_120277094_120325342_120325556_120329699
ES.31815.17	chr7	+	2289	4	NIC	ENSMUSG00000046096.8	novel	345	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	72.8758457164573	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276847	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120276936_120277012_120277094_120325342_120325556_120331587
ES.31815.18	chr7	+	4322	4	NIC	ENSMUSG00000046096.8	novel	345	4	NA	NA	3	-10	intron_retention	FALSE	canonical	1	5	junction_2	35.1220095603249	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAAAAAGGCTTCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	120276856	120333484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120277094_120315910_120315998_120325342_120325556_120329699
ES.31815.19	chr7	+	940	1	Intergenic	novelGene_26078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGTTGCTGAATAAC	NA	False	NA	NA	False	NA	NA	NA	120281928	120282868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120281900_120282900
ES.31815.2	chr7	+	4219	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-97	-3777	-35	0	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276805	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ES.31815.20	chr7	+	2519	1	Intergenic	novelGene_26079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTCCATCATTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	120319303	120321822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120319300_120321800
ES.31815.21	chr7	+	4605	1	FSM	ENSMUSG00000046096.8	ENSMUST00000208534.2	3158	1	-1591	144	557	-144	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGCTGATGCAGTAT	NA	False	NA	NA	False	NA	NA	NA	120325955	120330560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120326000_120330600
ES.31815.22	chr7	+	6652	1	FSM	ENSMUSG00000046096.8	ENSMUST00000208534.2	3158	1	-704	-2790	-704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	560	False	NA	NA	False	AATAAA	-24	NA	120326842	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120326800_120333500
ES.31815.3	chr7	+	2408	3	NIC	ENSMUSG00000046096.8	novel	4831	3	NA	NA	-35	0	intron_retention	FALSE	canonical	3	16	junction_2	87.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276805	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120277094_120325342_120325556_120331587
ES.31815.4	chr7	+	3435	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-92	-2998	-30	-779	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATGTTCTGTGTTGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	120276810	120332715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ES.31815.5	chr7	+	2260	3	NNC	ENSMUSG00000046096.8	novel	4831	3	NA	NA	-30	-5	intron_retention	FALSE	canonical	3	9	junction_2	91	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCTTCTATTACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	120276810	120333489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120277094_120325342_120325556_120331725
ES.31815.6	chr7	+	1293	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-87	-861	-25	-126	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTGTGTATATGTGTG	NA	False	NA	NA	False	NA	NA	NA	120276815	120330578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ES.31815.7	chr7	+	4181	4	NNC	ENSMUSG00000046096.8	novel	345	4	NA	NA	-25	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.3170195778386	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACTAAAAAGGCTTC	NA	False	NA	NA	False	AATAAA	-10	NA	120276815	120333480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120276936_120277026_120277094_120325342_120325556_120329699
ES.31815.8	chr7	+	4286	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-38	583	-25	0	multi-exon	FALSE	canonical	3	80	junction_2	55.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276815	120333494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120277094_120325342_120325556_120329699
ES.31815.9	chr7	+	1846	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	-29	3014	-16	359	multi-exon	FALSE	canonical	3	80	junction_2	55.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTGGCTGTTTTGGC	NA	False	NA	NA	False	CATAAA	-17	NA	120276824	120331063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120277094_120325342_120325556_120329699
ES.31816.1	chr7	+	4498	32	NNC	ENSMUSG00000030889.15	novel	4148	33	NA	NA	-28	0	intron_retention	TRUE	canonical	0	0	junction_1	1.03124950729973	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGAGTACTGGTAATGA	NA	False	NA	NA	False	AATAGA	-19	NA	120338751	120404764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120338791_120339251_120339354_120351757_120351882_120358074_120358200_120358303_120358382_120361637_120361693_120366378_120366478_120367347_120367455_120371351_120371478_120372159_120372269_120372456_120372523_120374598_120374725_120375222_120375359_120375462_120375567_120377621_120377703_120378067_120378163_120379347_120379468_120381566_120381642_120381812_120381958_120383191_120383388_120385646_120385718_120389277_120389428_120390896_120390967_120391593_120391702_120392548_120392647_120393388_120393527_120394803_120394913_120398231_120398377_120398727_120398873_120401218_120401343_120403153_120403763_120404141
ES.31816.2	chr7	+	6647	27	NIC	ENSMUSG00000030889.15	novel	4409	33	NA	NA	7	-3830	intron_retention	FALSE	canonical	0	0	junction_2	1.02628185108664	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGGCACATATTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	120339238	120400934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120339354_120351757_120351882_120358074_120358200_120358303_120358382_120361637_120361693_120366378_120366478_120367347_120367455_120371351_120371478_120372159_120372269_120372456_120372523_120374598_120374725_120375222_120375359_120375462_120375567_120377621_120377703_120378067_120378163_120379347_120379468_120381566_120381642_120381812_120381958_120383191_120383388_120385646_120385718_120389277_120390967_120391593_120391702_120392548_120392647_120393388_120393527_120394803_120394913_120398231_120398377_120398727
ES.31816.3	chr7	+	2311	21	ISM	ENSMUSG00000030889.15	ENSMUST00000167213.9	4148	33	0	15298	0	-2	5prime_fragment	FALSE	canonical	0	0	junction_2	1.04403065089106	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTTGTCTCCTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	120339269	120389466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120339354_120351757_120351882_120358074_120358200_120358303_120358382_120361637_120361693_120366378_120366478_120367347_120367455_120371351_120371478_120372159_120372269_120372456_120372523_120374598_120374725_120375222_120375359_120375462_120375567_120377621_120377703_120378067_120378163_120379347_120379468_120381566_120381642_120381812_120381958_120383191_120383388_120385646_120385718_120389277
ES.31817.1	chr7	-	173	1	Intergenic	novelGene_26080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGTGGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	120403461	120403288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120403300_120403500
ES.31818.1	chr7	+	173	1	Intergenic	novelGene_26081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATTCTCTCAAAATA	NA	False	NA	NA	False	NA	NA	NA	120405867	120406040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120405900_120406000
ES.31819.1	chr7	+	134	1	Intergenic	novelGene_26082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	120431094	120431228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120431100_120431200
ES.3182.1	chr10	+	4040	1	Intergenic	novelGene_2496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77254202	77258242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77254200_77258200
ES.31820.1	chr7	-	133	1	Intergenic	novelGene_26083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	120441919	120441786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120441800_120441900
ES.31821.1	chr7	+	3161	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	-19	3438	-19	11	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGCGTATTTACTAC	NA	False	NA	20	True	AATATA	-27	NA	120442034	120503235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.11	chr7	+	6546	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	32	2	32	-2	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGCTTTTGATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	120442085	120506671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.12	chr7	+	2978	16	NIC	ENSMUSG00000035064.18	novel	3047	18	NA	NA	-4	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	29.5992492397283	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTTTGGCCTTTA	NA	False	NA	2	True	AATATA	-9	NA	120442785	120503217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120443009_120457566_120457886_120472531_120472633_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.14	chr7	+	4179	14	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	-1394	-2	intron_retention	FALSE	canonical	3	73	junction_2	8.25911725013511	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTTGGCCTTTATACAT	NA	False	NA	7	True	AATATA	-14	NA	120474048	120503222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.15	chr7	+	1623	10	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	-2471	-4	intron_retention	FALSE	canonical	3	79	junction_5	7.06757506390633	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTCTCACTCTTGATAG	NA	False	NA	6	True	TATAAA	-16	NA	120484675	120502724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.16	chr7	+	1881	10	ISM	ENSMUSG00000035064.18	ENSMUST00000106488.3	2537	18	34620	-498	-2115	-7	3prime_fragment	FALSE	canonical	3	74	junction_6	8.57789291805279	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTTTGGCCTTTA	NA	False	NA	2	True	AATATA	-9	NA	120485031	120503217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.17	chr7	+	4047	7	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	-1299	-7	intron_retention	FALSE	canonical	3	74	junction_3	10.3722385883344	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTTTGGCCTTTA	NA	False	NA	2	True	AATATA	-9	NA	120485847	120503217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.18	chr7	+	2323	1	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	2329	-3736	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGATCTCCTAATGGGA	NA	False	NA	NA	False	NA	NA	NA	120493536	120495859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120493500_120495900
ES.31821.2	chr7	+	2635	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	0	3945	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCACTCTTGATAGCCTT	NA	False	NA	10	True	TATAAA	-20	NA	120442053	120502728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.3	chr7	+	6344	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	9	227	9	-227	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTATCAGTTTGCTTTAG	NA	False	NA	NA	False	AATAAA	-35	NA	120442062	120506446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.4	chr7	+	4414	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	13	2153	13	1296	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATCTCTCAGAGTAAC	NA	False	NA	NA	False	NA	NA	NA	120442066	120504520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.5	chr7	+	4074	17	NNC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_9	23.1758730957433	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	9	True	AATATA	-16	NA	120442078	120503224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485911_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.6	chr7	+	5923	15	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	25	-240	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	31.2332404038142	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTGGCCCTTACGCTAT	NA	False	NA	NA	False	AATAAA	-22	NA	120442078	120506433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120488412_120488491_120488911_120488975_120494406_120494532_120498590_120498770_120502504
ES.31821.7	chr7	+	3345	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	26	3209	26	240	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCTGTCCTTGTCATT	NA	False	NA	NA	False	NA	NA	NA	120442079	120503464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.8	chr7	+	3199	19	NIC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.5754362268637	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	9	True	AATATA	-16	NA	120442079	120503224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120442324_120443918_120444013_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ES.31821.9	chr7	+	2514	17	NNC	ENSMUSG00000035064.18	novel	6580	18	NA	NA	28	-4227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	22.6238777345971	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGATTGTGTTCTTATG	NA	False	NA	NA	False	NA	NA	NA	120442081	120495368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120495058
ES.31822.1	chr7	-	133	1	Intergenic	novelGene_26084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120476002	120475869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120475900_120476000
ES.31823.1	chr7	-	146	1	Intergenic	novelGene_26085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAATATTA	NA	False	NA	NA	False	NA	NA	NA	120509926	120509780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120509800_120509900
ES.31824.1	chr7	-	160	1	Intergenic	novelGene_26086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120510691	120510531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120510500_120510700
ES.31825.1	chr7	+	4019	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-26	-4	intron_retention	TRUE	non_canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120516940	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545934_120546170
ES.31825.10	chr7	+	3437	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	12	-4	intron_retention	TRUE	canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120516978	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545539_120546319
ES.31825.11	chr7	+	2615	20	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-8	14	intron_retention	FALSE	canonical	0	0	junction_14	80.8011477936084	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGAAAATCATGGTTTAATA	NA	False	NA	27	True	AATAAA	-29	NA	120516985	120545058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538304_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.13	chr7	+	3941	19	NIC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	284	junction_14	34.0962689389258	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGGGCAGGATTACGAA	NA	False	NA	12	True	AATAAA	-14	NA	120516993	120545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.14	chr7	+	3331	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	6	-3	intron_retention	FALSE	canonical	2	3	junction_14	78.167944197094	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCGTCATAGTGCTG	NA	False	NA	NA	False	AATAAA	-11	NA	120516999	120545469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120537902_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.15	chr7	+	6644	18	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	284	junction_13	35.074907483101	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGGCAGGATTACGAAA	NA	False	NA	13	True	AATAAA	-15	NA	120517000	120545044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120532954_120533055_120533148_120533995_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.16	chr7	+	4332	20	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-6	4	intron_retention	FALSE	canonical	3	284	junction_15	33.2048956774887	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATAGTGCTGCTGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	120517000	120545476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.17	chr7	+	2934	20	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	103.470953543237	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517000	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527729_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120543769_120543896_120544698
ES.31825.18	chr7	+	4026	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_16	104.161353197815	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCAGAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	120517000	120546655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120539034_120539367_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.19	chr7	+	2953	20	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_14	80.8011477936084	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCGTCATAGTGCT	NA	False	NA	NA	False	AATAAA	-10	NA	120517000	120545468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.2	chr7	+	2720	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-57	1531	-17	80	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAAGAGAACCTTAAG	NA	False	NA	93	True	AATGAA	-28	NA	120516949	120545124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.20	chr7	+	6009	19	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-5	-4	intron_retention	FALSE	canonical	0	0	junction_6	82.9192862046663	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCGTCATAGTGCT	NA	False	NA	NA	False	AATAAA	-10	NA	120517001	120545468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527729_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532954_120533055_120533148_120533995_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.21	chr7	+	2503	20	FSM	ENSMUSG00000030880.15	ENSMUST00000207481.2	2545	20	40	2	0	-2	multi-exon	TRUE	canonical	0	0	junction_3	79.6659577231367	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGGGCAGGATTACGA	NA	False	NA	11	True	AATAAA	-13	NA	120517006	120545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.23	chr7	+	3421	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_21	99.2432820141661	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCAGAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	120517008	120546655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530471_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.24	chr7	+	1190	14	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_13	88.3198195907599	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGGCAGGATTACGAAA	NA	False	NA	13	True	AATAAA	-15	NA	120517008	120545044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534019_120544901
ES.31825.25	chr7	+	2609	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	3	17	intron_retention	FALSE	canonical	3	18	junction_7	75.1043274385704	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGGTTTAATATTT	NA	False	NA	30	True	AATAAA	-32	NA	120517009	120545061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530471_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.26	chr7	+	3187	22	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_15	101.324046298382	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517009	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120537902_120538082_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.27	chr7	+	4285	19	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	5	4	intron_retention	FALSE	canonical	3	286	junction_7	33.567326853635	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCATAGTGCTGCTGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	120517011	120545476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.28	chr7	+	3400	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	5	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120517011	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545550_120546334
ES.31825.29	chr7	+	3085	20	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_9	80.6192446248296	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCATAGTGCTGCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	120517011	120545473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532534_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.3	chr7	+	2828	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-48	1414	-8	197	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGGGTTTCTGAGGC	NA	False	NA	NA	False	ATTAAA	-16	NA	120516958	120545241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.30	chr7	+	3331	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.544326256922	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTAAGTCTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	120517011	120546650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.31	chr7	+	3945	19	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	5	-4	intron_retention	FALSE	canonical	3	286	junction_7	33.3170793704637	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCGTCATAGTGCT	NA	False	NA	NA	False	AATAAA	-10	NA	120517011	120545468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.33	chr7	+	5695	17	NIC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	6	0	intron_retention	FALSE	canonical	3	286	junction_7	31.4235182626007	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517012	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120541791_120543769_120543896_120544698
ES.31825.34	chr7	+	4439	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	6	-4	intron_retention	TRUE	non_canonical	0	0	junction_20	78.8964352806893	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120517012	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120540049_120541712_120541791_120543769_120543896_120544698_120545689_120545924
ES.31825.35	chr7	+	5260	21	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	8	1	intron_retention	TRUE	non_canonical	0	0	junction_20	78.7635702593528	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCAGAATGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	120517014	120546656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120545781
ES.31825.36	chr7	+	4797	20	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	11	3	intron_retention	FALSE	canonical	0	0	junction_19	80.8011477936084	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCAGAATGTGGTATTT	NA	False	NA	NA	False	NA	NA	NA	120517017	120546658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.38	chr7	+	3341	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	101.693238414503	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCTTCAGAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	120517018	120546654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120538994_120539541_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.39	chr7	+	3386	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	99.0841736574906	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCTTCAGAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	120517018	120546654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541724_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.4	chr7	+	3460	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-8	1	intron_retention	TRUE	canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCAGAATGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	120516958	120546656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.40	chr7	+	4342	20	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	13	1	intron_retention	FALSE	canonical	0	0	junction_19	80.6782536339148	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCAGAATGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	120517019	120546656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.43	chr7	+	3849	19	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	13	0	intron_retention	FALSE	canonical	2	3	junction_14	82.0902281368224	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517019	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120537902_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.46	chr7	+	3026	21	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	103.91788825799	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517021	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527262_120527650_120527729_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.48	chr7	+	2987	20	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	80.8011477936084	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517027	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538304_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.5	chr7	+	3462	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-7	1	intron_retention	TRUE	non_canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCAGAATGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	120516959	120546656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545526_120546305
ES.31825.52	chr7	+	3473	20	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_6	80.943056486346	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120517030	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527729_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.54	chr7	+	3112	19	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	6454	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	127.999047546611	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120523460	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533076_120533148_120533995_120534117_120536825_120536908_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545551_120546334
ES.31825.55	chr7	+	6427	12	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-3596	2	intron_retention	FALSE	canonical	3	284	junction_7	39.1204962026365	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCATAGTGCTGCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	120530456	120545474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.56	chr7	+	2214	12	ISM	ENSMUSG00000030880.15	ENSMUST00000106483.4	3001	22	15535	-5	-1524	5	3prime_fragment	FALSE	canonical	3	284	junction_7	40.54871572698	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATAGTGCTGCTGTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	120532528	120545477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.57	chr7	+	2382	10	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-58	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	113.501291666115	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120533994	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.58	chr7	+	4978	8	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	-28	-3	intron_retention	FALSE	canonical	2	3	junction_1	127.051652681024	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCGTCATAGTGCTG	NA	False	NA	NA	False	AATAAA	-11	NA	120534024	120545469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120536908_120537902_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.59	chr7	+	4250	5	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	3119	-5	intron_retention	FALSE	canonical	0	0	junction_4	168.601601415882	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTAAGTCTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	120537171	120546650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.6	chr7	+	3064	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	-47	1177	-7	6	multi-exon	FALSE	canonical	3	284	junction_16	33.3787357459805	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTGCTGCTGTCCTCA	NA	False	NA	NA	False	AATAAA	-20	NA	120516959	120545478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.60	chr7	+	2663	7	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	4172	-4	intron_retention	FALSE	canonical	0	0	junction_6	138.109457396017	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120538224	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120538279_120538361_120538520_120538971_120540049_120541712_120541791_120543769_120543896_120544698_120545544_120546326
ES.31825.61	chr7	+	3411	3	NIC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	4800	1	intron_retention	FALSE	canonical	3	356	junction_1	27.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGCAGGATTACGAAAA	NA	False	NA	14	True	AATAAA	-16	NA	120538852	120545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120541791_120543769_120543896_120544698
ES.31825.7	chr7	+	3011	21	NNC	ENSMUSG00000030880.15	novel	3001	22	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_6	78.4983280076716	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCATAGTGCTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	120516968	120545472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530139_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ES.31825.8	chr7	+	3988	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	3	-4	intron_retention	TRUE	canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120516969	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545612_120545850
ES.31825.9	chr7	+	3981	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	11	-4	intron_retention	TRUE	non_canonical	0	0	junction_21	76.9953616413724	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	False	NA	NA	False	NA	NA	NA	120516977	120546651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545965_120546202
ES.31826.1	chr7	-	2224	1	Antisense	novelGene_ENSMUSG00000030880.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATGCATACATATTCA	NA	False	NA	NA	False	ATTAAA	-21	NA	120517973	120515749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_120515700_120518000
ES.31827.1	chr7	-	287	1	Intergenic	novelGene_26087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGCAAAAAAATTTAAAC	NA	False	NA	NA	False	NA	NA	NA	120521095	120520808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120520800_120521100
ES.31828.1	chr7	+	183	1	Intergenic	novelGene_26088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTGCCCTCCAAGG	15	False	NA	NA	False	NA	NA	NA	120553082	120553265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120553100_120553300
ES.31829.1	chr7	-	2541	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	-22	6	-22	-6	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGGTCTACGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	120581557	120556264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
ES.31829.2	chr7	-	2624	5	NNC	ENSMUSG00000030878.12	novel	2525	5	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.710403344427	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGGGTCTACGTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	120581507	120556264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569795_120581199
ES.31829.3	chr7	-	9138	1	Intergenic	novelGene_26089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTTTTGGTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	120569363	120560225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_120560200_120569400
ES.3183.1	chr10	-	183	1	Intergenic	novelGene_2497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCTAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	77312115	77311932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77311900_77312100
ES.31830.1	chr7	+	173	1	Intergenic	novelGene_26090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	120603558	120603731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120603600_120603700
ES.31831.1	chr7	+	1764	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	58	1	58	-1	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGCACCATGTTCTTC	9485	False	NA	6	True	AATAAA	-15	NA	120633725	120676057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ES.31831.4	chr7	+	1631	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	118	-4	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	114.917361612595	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCTGGCACCATGTTC	9545	False	NA	3	True	AATAAA	-12	NA	120633785	120676054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120634129_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ES.31831.5	chr7	+	5754	4	NIC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	126	-1	intron_retention	FALSE	canonical	3	223	junction_3	53.1245915016974	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGCACCATGTTCTTC	9553	False	NA	6	True	AATAAA	-15	NA	120633793	120676057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_120634199_120647060_120651520_120656437_120656623_120675352
ES.31831.6	chr7	+	1586	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	129	108	129	-108	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGGTTATAAAGTAGA	9556	False	NA	27	True	AATAAA	-36	NA	120633796	120675950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ES.31831.7	chr7	+	1587	6	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	130	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	121.708504222178	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGCACCATGTTCTTC	9557	False	NA	6	True	AATAAA	-15	NA	120633797	120676057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352_120675569_120675673
ES.31831.8	chr7	+	4320	3	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	13128	-126	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	113.5	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTCCATTCAATTCCAAA	NA	False	NA	9	True	AATAAA	-18	NA	120647961	120675932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_120651520_120656437_120656623_120675355
ES.31832.1	chr7	-	3207	1	Antisense	novelGene_ENSMUSG00000108954.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACACAGACTTAAGGGG	NA	False	NA	NA	False	AATAAA	-39	NA	120656147	120652940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_120652900_120656100
ES.31833.1	chr7	+	176	1	Intergenic	novelGene_26091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	120709339	120709515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_120709300_120709500
ES.31834.1	chr7	+	4712	1	Antisense	novelGene_ENSMUSG00000063317.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAACGTGGGTGCACCCAA	NA	False	NA	NA	False	NA	NA	NA	121248532	121253244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121248500_121253200
ES.31835.1	chr7	+	2457	1	Intergenic	novelGene_26092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGACACCCAGACTACA	NA	False	NA	NA	False	NA	NA	NA	121285295	121287752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121285300_121287800
ES.31836.1	chr7	-	10415	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-215	-2	-215	2	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTCTCTCCCT	NA	False	NA	1	True	AATAAA	-29	NA	121306691	121241241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.11	chr7	-	6518	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-200	3880	-200	-3880	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTAGTGCTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	121306676	121245123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.12	chr7	-	6082	17	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-166	-3882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	13.2356939277848	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGAGTTTAGTGCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121306642	121245125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858_121306174_121306573
ES.31836.13	chr7	-	6562	17	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-180	-3882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.7955689989313	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGAGTTTAGTGCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121306656	121245125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121266746_121266813_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.14	chr7	-	6574	17	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-198	-3882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.7663166795811	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGAGTTTAGTGCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121306674	121245125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258160_121258337_121260568_121260689_121261970_121262081_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.16	chr7	-	4784	8	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-992	-3884	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.6954805789367	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGGAGTTTAGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	121267030	121245127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121261951_121262081_121266026_121266157_121267010
ES.31836.17	chr7	-	5518	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-187	4867	-187	-4867	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGGAAATCTCTTAGAA	NA	False	NA	NA	False	GATAAA	-19	NA	121306663	121246110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.18	chr7	-	4732	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-188	5654	-188	-5654	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCTACCAGTCTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	121306664	121246897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.19	chr7	-	3014	15	ISM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-177	9091	-177	7670	5prime_fragment	FALSE	canonical	3	25	junction_5	9.49032805179106	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTGTCTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	121306653	121250334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.2	chr7	-	10302	17	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-167	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.2356939277848	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATATTTGTCTTTTCTCT	NA	False	NA	-3	True	AATAAA	-25	NA	121306643	121241245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121245628_121245688_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.21	chr7	-	2732	13	ISM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-198	16488	-198	273	5prime_fragment	FALSE	canonical	3	25	junction_3	7.58653778449403	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAACTCTGTTGAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	121306674	121257731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.22	chr7	-	4453	1	Intergenic	novelGene_26093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAAAACTAGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	121297065	121292612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121292600_121297100
ES.31836.3	chr7	-	10323	16	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-188	-13	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	12.14907403879	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCTTCAAGACATATTT	NA	False	NA	-14	True	AATAAA	-14	NA	121306664	121241256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258160_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.4	chr7	-	10274	15	NIC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-168	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	13.4196398868926	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTCTTCAAGACATATT	NA	False	NA	-15	True	AATAAA	-13	NA	121306644	121241257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.5	chr7	-	6884	15	NIC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-193	-3429	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	13.4196398868926	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGCATGAGGCTAC	NA	False	NA	3	True	AATAAA	-35	NA	121306669	121244672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.6	chr7	-	6957	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-188	3429	-188	-3429	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGCATGAGGCTAC	NA	False	NA	3	True	AATAAA	-35	NA	121306664	121244672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31836.8	chr7	-	6876	16	NNC	ENSMUSG00000063317.8	novel	10198	16	NA	NA	-174	-3446	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	12.14907403879	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTTTTCCTGTAAACAT	NA	False	NA	-14	True	AATAAA	-18	NA	121306650	121244689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121248975_121250704_121250858_121252324_121252484_121258160_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ES.31837.1	chr7	+	180	1	Intergenic	novelGene_26094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTTCTTGAAATG	NA	False	NA	NA	False	NA	NA	NA	121526862	121527042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121526900_121527000
ES.31838.1	chr7	+	2912	7	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121535440	121558296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121536363_121540391_121540458_121542999_121543115_121548961_121549130_121550388_121550516_121555152_121556579_121558208
ES.31838.2	chr7	+	3198	6	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATAAAGATCAGAACTG	NA	False	NA	NA	False	NA	NA	NA	121535441	121556953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121536363_121540391_121540458_121542999_121543115_121548961_121549130_121550388_121550516_121555152
ES.31838.3	chr7	+	3280	7	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATAAAGATCAGAACTG	NA	False	NA	NA	False	NA	NA	NA	121535441	121556953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121536363_121537318_121537404_121540394_121540458_121542999_121543115_121548961_121549130_121550388_121550516_121555152
ES.31838.4	chr7	+	6926	2	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTCCACCCACAAAATCC	NA	False	NA	NA	False	NA	NA	NA	121535441	121546396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121536363_121540391
ES.31838.5	chr7	+	4457	5	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATAAAGATCAGAACTG	NA	False	NA	NA	False	NA	NA	NA	121535441	121556953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121536363_121540391_121540458_121542999_121543115_121548961_121550516_121555152
ES.31838.6	chr7	+	10951	1	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTTTCCACCCACAAA	NA	False	NA	NA	False	NA	NA	NA	121535441	121546392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121535400_121546400
ES.31838.7	chr7	+	6596	1	Antisense	novelGene_ENSMUSG00000034951.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	121535642	121542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121535600_121542200
ES.31838.8	chr7	+	152	1	Intergenic	novelGene_26095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	121546034	121546186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121546000_121546200
ES.31839.1	chr7	-	3342	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	21	-461	4	461	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGAGCTGAGAGGAAT	8945	False	NA	NA	False	AGTAAA	-15	NA	121580913	121521600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.10	chr7	-	3032	18	NIC	ENSMUSG00000034951.11	novel	2902	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	65.2684634286659	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGGGTGTTTCCTTCTT	8941	False	NA	-2	True	AATAAA	-15	NA	121580917	121522063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121531275_121531425_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.11	chr7	-	3050	17	NNC	ENSMUSG00000034951.11	novel	2902	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	50.1382074245779	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAAGGGTGTTTCCTTCT	8941	False	NA	-3	True	AATAAA	-14	NA	121580917	121522064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536532_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.2	chr7	-	2908	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	-3	-3	-3	3	multi-exon	FALSE	canonical	3	174	junction_8	14.1585607937389	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8921	False	NA	3	True	AATAAA	-20	NA	121580937	121522058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.4	chr7	-	4843	16	ISM	ENSMUSG00000034951.11	ENSMUST00000205438.2	3355	17	17	42803	0	3	5prime_fragment	FALSE	canonical	3	174	junction_7	14.2261105795724	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8941	False	NA	3	True	AATAAA	-20	NA	121580917	121522058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.5	chr7	-	2816	17	NNC	ENSMUSG00000034951.11	novel	2902	17	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	49.7110007317294	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTTTCCTTCTTCTCTG	8927	False	NA	3	True	AATAAA	-20	NA	121580931	121522058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555266_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.31839.8	chr7	-	2780	13	NNC	ENSMUSG00000034951.11	novel	2902	17	NA	NA	18454	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.767887182482	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGGGTGTTTCCTTCTT	NA	False	NA	-2	True	AATAAA	-15	NA	121562463	121522063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121531275_121531425_121534880_121535022_121535686_121536364_121540392_121540459_121543000_121543118_121548967_121549197_121550385_121550514_121555152_121555352_121562360
ES.31839.9	chr7	-	2822	16	NIC	ENSMUSG00000034951.11	novel	2902	17	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	50.7763724580636	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGGGTGTTTCCTTCTT	8936	False	NA	-2	True	AATAAA	-15	NA	121580922	121522063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ES.3184.1	chr10	+	193	1	Intergenic	novelGene_2498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGGAGACAATTTTTAC	NA	False	NA	NA	False	NA	NA	NA	77313727	77313920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77313700_77313900
ES.31840.1	chr7	+	5829	2	Genic_Genomic	ENSMUSG00000108511.2	novel	750	2	NA	NA	5226	4308	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTAGTTCTATGAATT	NA	False	NA	NA	False	NA	NA	NA	121586209	121592647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_121586887_121587495
ES.31841.1	chr7	-	4911	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	11	-7	11	7	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGTTTTGATGGGTA	NA	False	NA	2	True	AATAAA	-21	NA	121620434	121585937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.11	chr7	-	4099	10	FSM	ENSMUSG00000030872.15	ENSMUST00000144779.2	2351	10	-1749	1	-1749	-1	multi-exon	FALSE	canonical	3	813	junction_7	23.1362043260619	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121603463	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297
ES.31841.12	chr7	-	3227	16	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	8507	-1	intron_retention	FALSE	canonical	0	0	junction_15	212.020020019075	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121611883	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121611747
ES.31841.13	chr7	-	3707	10	NNC	ENSMUSG00000030872.15	novel	2351	10	NA	NA	-1342	-1	intron_retention	FALSE	canonical	1	5	junction_9	264.328078972578	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121603056	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599439_121601297
ES.31841.14	chr7	-	6164	13	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-6357	-1	intron_retention	FALSE	canonical	3	811	junction_11	24.2193391505402	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121608071	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121606604_121607553
ES.31841.17	chr7	-	2940	18	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	269.588601095874	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121620427	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589427_121589515_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.18	chr7	-	3862	17	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	205.4686335551	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTGTTGAGTCC	NA	False	NA	-6	True	AATAAA	-13	NA	121620365	121587988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598954_121599017_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.19	chr7	-	6782	15	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	7	-2	intron_retention	FALSE	canonical	3	748	junction_14	35.0029882106295	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTGTTGAGTC	NA	False	NA	-7	True	AATAAA	-12	NA	121620383	121587989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.20	chr7	-	2793	17	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.581804771954	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTGTTGAGTC	NA	False	NA	-7	True	AATAAA	-12	NA	121620371	121587989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606597_121607549_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.21	chr7	-	3645	15	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	748	junction_14	37.1371561558897	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGGTGTTGAGTC	NA	False	NA	-7	True	AATAAA	-12	NA	121620427	121587989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.22	chr7	-	6634	12	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-6375	-3	intron_retention	FALSE	canonical	3	811	junction_10	25.248844176148	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGCCTGGTGTTGAGT	NA	False	NA	-8	True	AATAAA	-11	NA	121608089	121587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601971_121603109_121606604_121607553
ES.31841.24	chr7	-	2900	18	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	271.77999702334	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGCCTGGTGTTGAGT	NA	False	NA	-8	True	AATAAA	-11	NA	121620416	121587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596066_121596127_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.25	chr7	-	2802	17	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	204.69564869276	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGCCTGGTGTTGAGT	NA	False	NA	-8	True	AATAAA	-11	NA	121620387	121587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607644_121609905_121609982_121611371_121611457_121620211
ES.31841.27	chr7	-	3302	16	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	748	junction_15	36.1826232081399	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGCCTGGTGTTGAGT	NA	False	NA	-8	True	AATAAA	-11	NA	121620424	121587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.28	chr7	-	4501	16	NNC	ENSMUSG00000030872.15	novel	4251	18	NA	NA	0	-5	intron_retention	TRUE	non_canonical	0	0	junction_7	211.33974753673	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTGCCTGGTGTTGA	NA	False	NA	-10	True	AATAAA	-9	NA	121620390	121587992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598950_121599017_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.29	chr7	-	5110	16	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	4	-5	intron_retention	FALSE	canonical	3	748	junction_15	36.1413275289599	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTGCCTGGTGTTGA	NA	False	NA	-10	True	AATAAA	-9	NA	121620399	121587992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.3	chr7	-	6570	16	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	2	-1	intron_retention	TRUE	non_canonical	0	0	junction_7	211.33974753673	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGTGTCACTGTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	121620408	121585945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598954_121599017_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.31	chr7	-	2702	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	29	2184	-6	-141	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGTTCGTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	121620416	121588128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.32	chr7	-	8967	10	NNC	ENSMUSG00000030872.15	novel	2351	10	NA	NA	-4549	-143	intron_retention	FALSE	canonical	1	2	junction_4	265.010179166251	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCTGTGTTCGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	121606263	121588130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121596435_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297
ES.31841.33	chr7	-	2244	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	35	2636	0	-593	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAATCTTTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	121620410	121588580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.4	chr7	-	5345	16	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	748	junction_15	36.1826232081399	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTAGTGTCACTGTTT	NA	False	NA	-7	True	AATAAA	-12	NA	121620423	121585946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.5	chr7	-	2883	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	-6	2038	-6	5	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGAGTCCACAGGG	NA	False	NA	0	True	AATAAA	-19	NA	121620451	121587982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.7	chr7	-	5121	11	ISM	ENSMUSG00000030872.15	ENSMUST00000124566.2	4251	18	15455	2040	-3221	3	intron_retention	FALSE	canonical	3	813	junction_7	21.9956813943101	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTTGAGTCCACAG	NA	False	NA	-2	True	AATAAA	-17	NA	121604935	121587984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889
ES.31841.8	chr7	-	5794	15	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	19	2	intron_retention	FALSE	canonical	3	748	junction_14	36.8192634807556	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGTGTTGAGTCCACA	NA	False	NA	-3	True	AATAAA	-16	NA	121620371	121587985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121596645_121596983_121597013_121597285_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31841.9	chr7	-	3910	17	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	205.4686335551	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121620399	121587987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598955_121599005_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ES.31842.1	chr7	+	177	1	Intergenic	novelGene_26096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121624512	121624689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121624500_121624700
ES.31843.1	chr7	+	176	1	Intergenic	novelGene_26097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	121625660	121625836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121625700_121625800
ES.31844.1	chr7	+	5388	2	Antisense	novelGene_ENSMUSG00000030871.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACCATCTTTTTGCCTC	NA	False	NA	NA	False	AAGAAA	-11	NA	121632172	121638399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121635295_121636133
ES.31845.1	chr7	+	169	1	Intergenic	novelGene_26098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121649924	121650093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121649900_121650100
ES.31846.1	chr7	+	146	1	Intergenic	novelGene_26099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTGAACCCTAACA	NA	False	NA	NA	False	NA	NA	NA	121661254	121661400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121661300_121661400
ES.31847.1	chr7	+	5130	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	-274	-7	-274	7	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTTCCGATTCTT	NA	False	NA	16	True	ATTAAA	-21	NA	121666123	121681424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.10	chr7	+	3082	5	FSM	ENSMUSG00000030870.13	ENSMUST00000148060.7	3300	5	215	3	-17	-3	multi-exon	FALSE	canonical	3	624	junction_1	31.2489999839995	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGATGTTGTCCCCAT	NA	False	NA	NA	False	NA	NA	NA	121666645	121676852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121666708_121666886_121668213_121670924_121670991_121671132_121671239_121675330
ES.31847.12	chr7	+	4598	7	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-17	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.495485408236	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTCCTTCCGATTC	NA	False	NA	14	True	ATTAAA	-19	NA	121666645	121681422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666708_121666894_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.15	chr7	+	4463	7	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	255.311574355727	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTCTTTCCTTCCGAT	NA	False	NA	12	True	ATTAAA	-17	NA	121666657	121681420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666708_121666886_121667217_121668132_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.16	chr7	+	6378	5	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	261	4561	-4	1	intron_retention	FALSE	canonical	3	624	junction_1	38.4211855621349	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTTGTCCCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	121666658	121676856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132
ES.31847.17	chr7	+	10017	2	ISM	ENSMUSG00000030870.13	ENSMUST00000148060.7	3300	5	228	1	-4	-1	intron_retention	FALSE	canonical	3	624	junction_1	0	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGATGTTGTCCCCATTG	NA	False	NA	NA	False	NA	NA	NA	121666658	121676854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_121666708_121666886
ES.31847.2	chr7	+	4796	8	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.515642247451	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTCTTTCCTTCC	NA	False	NA	9	True	ATTAAA	-14	NA	121666374	121681417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666471_121666546_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.22	chr7	+	4509	6	NIC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	276.261035978656	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTGTGTCTCTCTTTCC	NA	False	NA	5	True	ATTAAA	-10	NA	121666667	121681413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121666708_121666886_121667217_121668003_121668213_121671132_121671239_121675330_121675414_121677672
ES.31847.24	chr7	+	4647	8	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	312.614974767652	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTTTCCTTCCGATTC	NA	False	NA	14	True	ATTAAA	-19	NA	121666675	121681422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121672638_121672710_121675330_121675414_121677672
ES.31847.25	chr7	+	1367	6	NIC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	33	227	intron_retention	FALSE	canonical	3	672	junction_3	19.7281524730523	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAATACTCTTATACT	NA	False	NA	24	True	AATAAA	-17	NA	121666702	121678061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.26	chr7	+	4722	6	NIC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	34	0	intron_retention	FALSE	canonical	3	672	junction_3	19.7281524730523	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTCTTTCCTTCC	NA	False	NA	9	True	ATTAAA	-14	NA	121666703	121681417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.27	chr7	+	1651	6	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	41	521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	282.429743476143	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGGGTGGTGAGTAA	NA	False	NA	5	True	ATTAAA	-10	NA	121666710	121678355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675332_121675414_121677672
ES.31847.28	chr7	+	5356	6	NNC	ENSMUSG00000030870.13	novel	599	6	NA	NA	274	4	intron_retention	FALSE	canonical	0	0	junction_2	337.584715293806	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTTCCTTCCGATT	NA	False	NA	13	True	ATTAAA	-18	NA	121666943	121681421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121668213_121668296_121668380_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.29	chr7	+	3837	2	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	8931	-7	7207	7	3prime_fragment	FALSE	canonical	3	714	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTTCCGATTCTT	NA	False	NA	16	True	ATTAAA	-21	NA	121675328	121681424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_121675414_121677672
ES.31847.3	chr7	+	1521	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	-19	3347	-19	236	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTATACTCTTAAGTCT	NA	False	NA	33	True	AATAAA	-26	NA	121666378	121678070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.4	chr7	+	5643	6	NIC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-4	3	intron_retention	FALSE	canonical	3	624	junction_1	32.6104277800829	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTCTTTCCTTCCGAT	NA	False	NA	12	True	ATTAAA	-17	NA	121666393	121681420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121666708_121666886_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.5	chr7	+	1802	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	10	3037	10	546	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTTGTGTGTGTGCTC	NA	False	NA	30	True	ATTAAA	-35	NA	121666407	121678380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ES.31847.6	chr7	+	2536	6	ISM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	10	4562	10	0	5prime_fragment	FALSE	canonical	3	624	junction_1	34.3685903115039	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTTGTCCCCATTGT	NA	False	NA	NA	False	NA	NA	NA	121666407	121676855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330
ES.31847.7	chr7	+	7883	8	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-3	3273	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_7	239.39259872964	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTGGCTTTATAATCA	NA	False	NA	NA	False	AATAAA	-15	NA	121666427	121684690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672_121683429_121683637
ES.31847.8	chr7	+	4628	8	NNC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-30	8597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	242.515642247451	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACTATCACAGAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	121666632	121690014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672_121681409_121689991
ES.31847.9	chr7	+	2126	4	NIC	ENSMUSG00000030870.13	novel	4849	7	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	318.83259278534	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTTGTCCCCATTGT	NA	False	NA	NA	False	NA	NA	NA	121666645	121676855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121666708_121666886_121667217_121668003_121668213_121675330
ES.31848.1	chr7	+	245	1	Antisense	novelGene_ENSMUSG00000030869.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAATAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	121692532	121692777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_121692500_121692800
ES.31849.1	chr7	+	960	2	Genic_Genomic	ENSMUSG00000108573.2	novel	2829	1	NA	NA	-110	2517	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121695195	121700651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_121695952_121700447
ES.31849.2	chr7	+	2762	3	Genic_Genomic	ENSMUSG00000108573.2	novel	2829	1	NA	NA	-110	840	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	121695195	121698974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_121696512_121696665_121697995_121698857
ES.31849.3	chr7	+	3091	3	Genic_Genomic	ENSMUSG00000108573.2	novel	2829	1	NA	NA	-110	2517	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121695195	121700651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_121696496_121696649_121698016_121700226
ES.3185.1	chr10	-	4472	1	Intergenic	novelGene_2499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	77322490	77318018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77318000_77322500
ES.31850.1	chr7	-	6497	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	-4659	15	3051	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCAGACCAGTTCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	121666278	121633384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.10	chr7	-	3391	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	-5	-164	-5	164	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAGTGCGTCATTACC	NA	False	NA	-2	True	NA	NA	NA	121666298	121637879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.12	chr7	-	5877	2	NNC	ENSMUSG00000030871.12	novel	3222	8	NA	NA	22385	162	intron_retention	FALSE	canonical	1	1	junction_1	0	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCCAGTGCGTCATTA	NA	False	NA	-4	True	NA	NA	NA	121643849	121637881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121643645_121643735
ES.31850.13	chr7	-	2056	9	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	6	160	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	48.4709964824327	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGCCAGTGCGTCAT	NA	False	NA	-6	True	NA	NA	NA	121666287	121637883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639120_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.14	chr7	-	2087	8	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	6	160	intron_retention	FALSE	canonical	3	113	junction_4	14.4405890546369	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGCCAGTGCGTCAT	NA	False	NA	-6	True	NA	NA	NA	121666287	121637883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639071_121643524_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.15	chr7	-	2200	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	-154	0	-154	0	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666640	121638043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.16	chr7	-	1683	8	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	49.6666438387383	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666279	121638043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121666127
ES.31850.17	chr7	-	3277	8	NIC	ENSMUSG00000030871.12	novel	3222	8	NA	NA	-6	0	intron_retention	FALSE	canonical	2	2	junction_2	51.5807272978138	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666299	121638043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639120_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.19	chr7	-	3700	7	FSM	ENSMUSG00000030871.12	ENSMUST00000151530.8	4900	7	-409	1609	-157	-1	multi-exon	FALSE	canonical	2	2	junction_2	55.4178571300704	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGTGTTTTGCCTCCA	NA	False	NA	-2	True	TTTAAA	-17	NA	121666643	121638044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639120_121643524_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.2	chr7	-	6406	10	NNC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	-3	3048	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.4518866977196	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTGTCAGACCAGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	121666296	121633387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121634362_121634467_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.20	chr7	-	3214	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	6	2	6	-2	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTGTTTTGCCTCC	NA	False	NA	-3	True	TTTAAA	-16	NA	121666287	121638045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.22	chr7	-	1749	9	NNC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	48.7889267662243	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTATGGGTGTTT	NA	False	NA	-10	True	TTTAAA	-9	NA	121666246	121638052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121638382_121638934_121639023_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.23	chr7	-	1878	9	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	15	-9	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	48.4709964824327	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTATGGGTGTTT	NA	False	NA	-10	True	TTTAAA	-9	NA	121666278	121638052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639120_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.24	chr7	-	6580	7	NIC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	-46	-46	intron_retention	FALSE	canonical	3	113	junction_3	15.4128373622625	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGATTCTTTCCTATT	NA	False	NA	-47	True	NA	NA	NA	121666532	121638089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.25	chr7	-	966	5	NNC	ENSMUSG00000030871.12	novel	4900	7	NA	NA	3	-12725	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.1832235657465	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACTCCAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	121666290	121650768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121651108_121651707_121651826_121654781_121654972_121662151_121662308_121666127
ES.31850.26	chr7	-	4162	2	ISM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	6	20262	6	-20262	5prime_fragment	FALSE	canonical	3	147	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAAAAAAATCACAATGA	NA	False	NA	NA	False	NA	NA	NA	121666287	121658305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121662308_121666127
ES.31850.27	chr7	-	3186	7	NNC	ENSMUSG00000030871.12	novel	2046	9	NA	NA	-13320	-28407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCGGCGGCGCATCGCC	NA	False	NA	NA	False	NA	NA	NA	121679806	121666450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121666707_121666885_121667215_121668001_121668211_121670922_121670996_121671135_121671233_121675325_121675413_121677671
ES.31850.28	chr7	-	1999	1	Antisense	novelGene_ENSMUSG00000030870.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAAGCAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	121680168	121678169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_121678200_121680200
ES.31850.29	chr7	-	337	1	Antisense	novelGene_ENSMUSG00000030870.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAGACTCATCACAAT	NA	False	NA	NA	False	NA	NA	NA	121678647	121678310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_121678300_121678600
ES.31850.3	chr7	-	5636	4	NIC	ENSMUSG00000030871.12	novel	3222	8	NA	NA	20244	3045	intron_retention	FALSE	canonical	3	137	junction_2	7.58653778449403	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATCTGTCAGACCAGT	NA	False	NA	NA	False	AATAAA	-11	NA	121645990	121633390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121638382_121638934_121639071_121643524_121643890_121645846
ES.31850.4	chr7	-	4915	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	-61	-2808	-61	1200	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAGAGCCAAGCGTGG	NA	False	NA	NA	False	NA	NA	NA	121666547	121635235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.5	chr7	-	3019	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	-1181	15	-427	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTCTTTTACATCT	NA	False	NA	NA	False	NA	NA	NA	121666278	121636862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.6	chr7	-	4458	1	NIC	ENSMUSG00000030871.12	novel	4900	7	NA	NA	24913	-428	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTTCTTTTACATC	NA	False	NA	NA	False	NA	NA	NA	121641321	121636863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121636900_121641300
ES.31850.7	chr7	-	4364	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	37	-1179	-22	-429	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGGTTCTTTTACAT	NA	False	NA	NA	False	NA	NA	NA	121666256	121636864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.8	chr7	-	2821	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	-983	15	-625	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGAAATCAGGTTTCC	NA	False	NA	NA	False	TATAAA	-14	NA	121666278	121637060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31850.9	chr7	-	2008	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	208	-170	15	170	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCGTCATTACCAAGCCA	NA	False	NA	4	True	NA	NA	NA	121666278	121637873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ES.31851.1	chr7	-	157	1	Intergenic	novelGene_26100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121682892	121682735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121682700_121682900
ES.31852.1	chr7	-	4468	2	NNC	ENSMUSG00000030869.12	novel	351	2	NA	NA	3186	1478	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGGATAAGAACATTAATA	NA	False	NA	NA	False	NA	NA	NA	121687824	121683147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121683423_121683631
ES.31852.10	chr7	-	520	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	39	2920	4	135	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGGAGTATTTACTA	6397	False	NA	NA	False	NA	NA	NA	121701070	121687545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.11	chr7	-	1465	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	-47	-2	-12	2	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGAGAGCATCTTAG	6346	False	NA	NA	False	AATAAA	-15	NA	121701121	121689276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.12	chr7	-	695	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	-43	764	-8	-2	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGTTTTTCTTTTTCTG	6350	False	NA	0	True	AATAAA	-27	NA	121701117	121690042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.13	chr7	-	2565	4	NIC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	4604	junction_1	442.398764314127	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCTCAATTAGTTT	6400	False	NA	-11	True	AATAAA	-16	NA	121701067	121690053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121690187_121690808_121692928_121695831_121695955_121700877
ES.31852.14	chr7	-	731	6	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2569.92883948175	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTCAATTAGTT	6413	False	NA	-12	True	AATAAA	-15	NA	121701054	121690054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690187_121690808_121690909_121691034_121691146_121692839_121692928_121695831_121695955_121700877
ES.31852.15	chr7	-	781	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTCAATTAGTT	6356	False	NA	-12	True	AATAAA	-15	NA	121701111	121690054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.17	chr7	-	5014	2	NNC	ENSMUSG00000030869.12	novel	1653	2	NA	NA	-2280	-1	intron_retention	TRUE	canonical	1	1	junction_1	0	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTATTTTTCTCAATTAG	NA	False	NA	-14	True	AATAAA	-13	NA	121695285	121690056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121692522_121692736
ES.31852.18	chr7	-	2340	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	9	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2283.60191090742	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6402	False	NA	-18	True	AATAAA	-9	NA	121701065	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690187_121690808_121692525_121692740_121692928_121695831_121695955_121700877
ES.31852.19	chr7	-	3531	4	NIC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	7	-5	intron_retention	FALSE	canonical	3	4604	junction_1	443.712619708848	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6400	False	NA	-18	True	AATAAA	-9	NA	121701067	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121690187_121690808_121690909_121692839_121695955_121700877
ES.31852.2	chr7	-	3415	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	41	23	6	-23	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAAGGTCAAAGTTTATA	6399	False	NA	NA	False	AATAAA	-14	NA	121701068	121684648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.20	chr7	-	2434	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2685.5119041814	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6413	False	NA	-18	True	AATAAA	-9	NA	121701054	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690291_121690808_121692522_121692736_121692928_121695831_121695955_121700877
ES.31852.21	chr7	-	977	7	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	2231.45583395435	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6428	False	NA	-18	True	AATAAA	-9	NA	121701039	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690187_121690808_121690909_121692839_121692928_121693091_121693273_121695831_121695955_121700450_121700648_121700877
ES.31852.23	chr7	-	3185	3	FSM	ENSMUSG00000030869.12	ENSMUST00000153173.8	755	3	-143	-2287	2	-5	multi-exon	FALSE	canonical	3	5329	junction_1	167.5	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6395	False	NA	-18	True	AATAAA	-9	NA	121701072	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121692928_121695831_121695955_121700877
ES.31852.24	chr7	-	620	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2160.03835324746	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6400	False	NA	-18	True	AATAAA	-9	NA	121701067	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695948_121700877
ES.31852.26	chr7	-	659	5	FSM	ENSMUSG00000030869.12	ENSMUST00000106471.9	552	5	-114	7	1	-5	multi-exon	FALSE	canonical	3	27	junction_1	2300.90270328843	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAGTATTTTTCTCAA	6394	False	NA	-18	True	AATAAA	-9	NA	121701073	121690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121690213_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.28	chr7	-	246	1	Intergenic	novelGene_26101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTCAAACTTAAGTTGT	7599	False	NA	NA	False	NA	NA	NA	121699868	121699622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121699600_121699900
ES.31852.3	chr7	-	3043	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	36	400	1	-400	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGTGTCATAATTTCCA	6394	False	NA	NA	False	AATAAA	-14	NA	121701073	121685025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.5	chr7	-	2526	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	40	913	5	-913	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATATAGAATAAAA	6398	False	NA	NA	False	NA	NA	NA	121701069	121685538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.6	chr7	-	2778	5	NIC	ENSMUSG00000030869.12	novel	3479	5	NA	NA	-2	-913	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2312.08855799254	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATATAGAATAAAA	6414	False	NA	NA	False	NA	NA	NA	121701053	121685538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121687830_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.7	chr7	-	2024	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	42	1413	7	-1413	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCCAGTGTTAGGAGAT	6400	False	NA	-1	True	AATAAA	-12	NA	121701067	121686038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.8	chr7	-	967	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	42	2470	7	585	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGTGTGCATGTTCA	6400	False	NA	NA	False	AATACA	-15	NA	121701067	121687095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31852.9	chr7	-	725	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	39	2715	4	340	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGCCTTGACCTTGTCT	6397	False	NA	NA	False	NA	NA	NA	121701070	121687340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ES.31853.1	chr7	-	4712	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-10	2	intron_retention	FALSE	canonical	3	16	junction_7	45.3928672446918	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTTCTATTTTTT	NA	False	NA	2	True	AATAAA	-22	NA	121732152	121706482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.11	chr7	-	3074	11	NIC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_7	42.1762966605652	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732142	121706487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.12	chr7	-	3839	13	NNC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	56.359646221585	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732182	121706487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121727929_121728240_121728896_121728957_121731942
ES.31853.13	chr7	-	4851	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	74	junction_8	28.4038176924183	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732159	121706487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.15	chr7	-	2633	13	FSM	ENSMUSG00000044702.14	ENSMUST00000106469.8	2559	13	-78	4	-3	-1	multi-exon	FALSE	canonical	3	13	junction_9	41.4242950721219	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732145	121706488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.16	chr7	-	3664	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	48.403264694211	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732181	121706488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728896_121728957_121731942
ES.31853.17	chr7	-	3991	13	NNC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	46.7002111582188	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732159	121706488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121706952_121709904_121710309_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.18	chr7	-	3070	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	46.3470558587798	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732164	121706488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.19	chr7	-	3605	13	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	43.6898793264018	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTGGCTTGTTCTA	NA	False	NA	-4	True	AATAAA	-16	NA	121732165	121706488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.2	chr7	-	3793	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	-41	-2	-2	2	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGTTCTATTTTTT	NA	False	NA	2	True	AATAAA	-22	NA	121732210	121706482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.20	chr7	-	1630	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	41.0980534818865	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGCTTGGCTTGTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	121732120	121706489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
ES.31853.21	chr7	-	1574	10	FSM	ENSMUSG00000044702.14	ENSMUST00000063587.13	1553	10	-27	6	10	-1	multi-exon	FALSE	canonical	0	0	junction_8	51.0709987525234	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732159	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728896_121728957_121731942
ES.31853.22	chr7	-	4793	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	18	-1	intron_retention	FALSE	canonical	1	3	junction_4	50.4797979393737	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732190	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.23	chr7	-	1516	10	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	59.7868642412568	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732093	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
ES.31853.24	chr7	-	2905	13	NNC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	54.8935839197584	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732164	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121706952_121709904_121710309_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.25	chr7	-	3631	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	48.2603134183738	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732142	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.26	chr7	-	3773	12	NIC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	13	junction_8	42.8863576142984	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732173	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.27	chr7	-	1492	9	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	54.165833326923	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732137	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121731942
ES.31853.28	chr7	-	3510	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	57.6399482682248	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTGCTTGGCTTGTTC	NA	False	NA	-6	True	AATAAA	-14	NA	121732158	121706490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.3	chr7	-	7794	11	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	74	junction_8	29.7153159162073	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732113	121706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896
ES.31853.30	chr7	-	3281	3	NIC	ENSMUSG00000044702.14	novel	1350	9	NA	NA	-2407	-5	intron_retention	FALSE	canonical	3	159	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACATTCTGCTTGGCTT	NA	False	NA	-10	True	AATAAA	-10	NA	121713670	121706494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121712590_121713531
ES.31853.32	chr7	-	171	1	Intergenic	novelGene_26102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTCTCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	121709589	121709418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121709400_121709600
ES.31853.33	chr7	-	3323	12	FSM	ENSMUSG00000044702.14	ENSMUST00000106468.7	3304	12	-19	0	10	0	multi-exon	FALSE	canonical	3	17	junction_1	44.3423943183529	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTGCTTGTCGAATTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	121732159	121710794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.34	chr7	-	3500	11	ISM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	5	4312	5	-2	5prime_fragment	FALSE	canonical	3	74	junction_7	29.0695717202714	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATTGCTTGTCGAATTT	NA	False	NA	NA	False	AATAAA	-14	NA	121732164	121710796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.35	chr7	-	2726	13	NNC	ENSMUSG00000044702.14	novel	3304	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	54.9900874905853	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATTGCTTGTCGAATTT	NA	False	NA	NA	False	AATAAA	-14	NA	121732161	121710796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121726764_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.36	chr7	-	2222	12	NIC	ENSMUSG00000044702.14	novel	3304	12	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	53.437226631653	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATTGCTTGTCGAATTT	NA	False	NA	NA	False	AATAAA	-14	NA	121732149	121710796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.37	chr7	-	3372	11	NIC	ENSMUSG00000044702.14	novel	3304	12	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	16	junction_6	46.6391466474248	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGATTGCTTGTCGAATT	NA	False	NA	NA	False	AATAAA	-13	NA	121732174	121710797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.38	chr7	-	5612	10	NIC	ENSMUSG00000044702.14	novel	3304	12	NA	NA	10	-6	intron_retention	FALSE	canonical	3	117	junction_6	21.0402318909439	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACGATTGCTTGTCGA	NA	False	NA	NA	False	AATAAA	-10	NA	121732159	121710800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.39	chr7	-	508	1	Intergenic	novelGene_26103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTTGAGGCCAGCCT	NA	False	NA	NA	False	ATTAAA	-40	NA	121714581	121714073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121714100_121714600
ES.31853.4	chr7	-	3646	14	NNC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	45.4488463344901	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732143	121706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121723656_121723733_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.40	chr7	-	3232	4	FSM	ENSMUSG00000044702.14	ENSMUST00000130149.3	3216	4	-17	1	10	-1	multi-exon	FALSE	canonical	3	129	junction_1	6.34209919681348	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGCTGCTTCTGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	121732159	121724805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.41	chr7	-	2123	1	FSM	ENSMUSG00000044702.14	ENSMUST00000205352.2	2145	1	49	-27	10	27	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTCGTATCGCAAGCTA	NA	False	NA	NA	False	NA	NA	NA	121732159	121730036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_121730000_121732200
ES.31853.5	chr7	-	2803	10	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	28	junction_7	42.6574064024954	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732174	121706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121728145_121728240_121728896_121728957_121731942
ES.31853.6	chr7	-	1982	12	NIC	ENSMUSG00000044702.14	novel	2559	13	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	40.7258522479556	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732161	121706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.7	chr7	-	7476	10	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-12	0	intron_retention	FALSE	canonical	3	117	junction_7	20.7030742632735	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732181	121706484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121728240_121728896_121728957_121731942
ES.31853.8	chr7	-	5813	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-2	1	intron_retention	FALSE	canonical	3	114	junction_2	21.5322168769582	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGCTTGTTCTATT	NA	False	NA	-2	True	AATAAA	-18	NA	121732113	121706486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121727667_121728145_121728240_121728896_121728957_121731942
ES.31853.9	chr7	-	4087	9	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	-3776	1	intron_retention	FALSE	canonical	3	74	junction_8	33.2180297428972	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGGCTTGTTCTATT	NA	False	NA	-2	True	AATAAA	-18	NA	121727444	121706486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271
ES.31854.1	chr7	+	2175	13	Fusion	ENSMUSG00000030868.7_ENSMUSG00000030867.8	novel	1532	6	NA	NA	-47	0	multi-exon	FALSE	canonical	1	1	junction_4	453.595053128032	733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	False	NA	56	True	ATTAAA	-14	NA	121732216	121769096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.10	chr7	+	5289	9	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-2503	2	intron_retention	FALSE	canonical	3	1108	junction_1	97.8940754080654	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTCTCTTTTTGGT	NA	False	NA	58	True	ATTAAA	-16	NA	121756158	121769098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.11	chr7	+	2306	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	-5	-102	-5	102	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCGCTGCCCATCTTTT	NA	False	NA	158	True	NA	NA	NA	121758656	121769198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.13	chr7	+	3715	8	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	29	2	intron_retention	FALSE	canonical	3	1124	junction_2	25.0281474197613	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTTTCTCTTTTTGGT	NA	False	NA	58	True	ATTAAA	-16	NA	121758690	121769098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.14	chr7	+	2949	9	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	29	-25	intron_retention	FALSE	canonical	0	0	junction_8	407.035855300243	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATTAAAATGTGTAC	NA	False	NA	31	True	ATTAAA	-26	NA	121758690	121769071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121759174_121759758_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768489_121768609
ES.31854.15	chr7	+	3269	7	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	29	4	intron_retention	FALSE	canonical	3	1108	junction_2	110.271508358032	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCTCTTTTTGGTCT	NA	False	NA	60	True	ATTAAA	-18	NA	121758690	121769100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121768487_121768609
ES.31854.16	chr7	+	2988	9	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	30	6	intron_retention	FALSE	canonical	3	1108	junction_2	97.9756825697071	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTCTTTTTGGTCTTG	NA	False	NA	62	True	ATTAAA	-20	NA	121758691	121769102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.17	chr7	+	3022	7	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	30	0	intron_retention	FALSE	canonical	1	1	junction_2	428.993168813781	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	False	NA	56	True	ATTAAA	-14	NA	121758691	121769096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121759928_121761615_121761710_121763242_121763463_121766819_121768207_121768303_121768487_121768609
ES.31854.18	chr7	+	2129	10	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_9	379.946812392095	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTCTCTTTT	NA	False	NA	54	True	ATTAAA	-12	NA	121758692	121769094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768646
ES.31854.19	chr7	+	2895	9	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-33	-2	intron_retention	FALSE	canonical	0	0	junction_6	381.147281244403	603	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTCTCTTTT	NA	False	NA	54	True	ATTAAA	-12	NA	121758696	121769094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121759174_121759758_121759928_121760729_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768059_121768207_121768303_121768487_121768609
ES.31854.2	chr7	+	1563	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	-28	-3	-28	3	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGCTCATTCATTAAA	NA	False	NA	17	True	AATAAA	-18	NA	121732235	121748270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ES.31854.22	chr7	+	3115	8	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-32	5	intron_retention	FALSE	canonical	0	0	junction_3	519.818924516715	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTCTTTTTGGTCTT	NA	False	NA	61	True	ATTAAA	-19	NA	121758697	121769101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121759174_121759758_121759928_121760729_121761710_121763223_121763463_121766819_121766976_121767788_121768207_121768303_121768489_121768609
ES.31854.23	chr7	+	2079	11	NNC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-31	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	366.335761290104	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCTTTATATATATTAAA	NA	False	NA	23	True	ATTAAA	-18	NA	121758698	121769063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609_121768882_121768931
ES.31854.24	chr7	+	2260	9	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-31	1	intron_retention	FALSE	canonical	3	1108	junction_2	95.5594546604364	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTTTCTCTTTTTGG	NA	False	NA	57	True	ATTAAA	-15	NA	121758698	121769097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768487_121768609
ES.31854.25	chr7	+	4522	7	NIC	ENSMUSG00000030867.8	novel	2199	10	NA	NA	-29	6	intron_retention	FALSE	canonical	3	1124	junction_2	24.7116706571342	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTCTTTTTGGTCTTG	NA	False	NA	62	True	ATTAAA	-20	NA	121758700	121769102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121759174_121759758_121761710_121763242_121763463_121766819_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.27	chr7	+	2134	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	66	-1	-2	1	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTTTCTCTTTTTGG	NA	False	NA	57	True	ATTAAA	-15	NA	121758727	121769097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ES.31854.29	chr7	+	2252	9	ISM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	79	-9	11	9	intron_retention	FALSE	canonical	3	1108	junction_2	97.9218438347645	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTTTGGTCTTGTAT	NA	False	NA	65	True	ATTAAA	-23	NA	121758740	121769105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303
ES.31854.3	chr7	+	1419	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	141.324758977329	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCCTGGTTTAGGCT	NA	False	NA	6	True	AATAAA	-7	NA	121732265	121748259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121747279
ES.31854.4	chr7	+	1400	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	143.257416910958	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCCTGGTTTAGGCT	NA	False	NA	6	True	AATAAA	-7	NA	121732275	121748259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121743007_121743111_121747279
ES.31854.5	chr7	+	1964	6	NNC	ENSMUSG00000030868.7	novel	2506	5	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.875744195545	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCCTGGTTTAGGCT	NA	False	NA	6	True	AATAAA	-7	NA	121732284	121748259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121732612_121733137_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ES.31854.7	chr7	+	544	5	NNC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	38	-6359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.087851617763	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTCATTTGGCAGCA	NA	False	NA	NA	False	NA	NA	NA	121732332	121741445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121741273
ES.31854.8	chr7	+	172	1	Intergenic	novelGene_26104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAAACAAC	572	False	NA	NA	False	NA	NA	NA	121739975	121740147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121740000_121740100
ES.31854.9	chr7	+	158	1	Intergenic	novelGene_26107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATGT	NA	False	NA	NA	False	NA	NA	NA	121755937	121756095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_121755900_121756100
ES.31855.1	chr7	-	305	1	Intergenic	novelGene_26105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATGAAGCAC	NA	False	NA	NA	False	NA	NA	NA	121744291	121743986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121744000_121744300
ES.31856.1	chr7	-	173	1	Intergenic	novelGene_26106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	121746756	121746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_121746600_121746800
ES.31857.1	chr7	+	3120	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	-166	-43	-166	43	multi-exon	TRUE	canonical	0	0	junction_4	2.23257138743647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCACTTTGTTACACATG	NA	False	NA	NA	False	NA	NA	NA	121888353	122227921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
ES.31857.2	chr7	+	3472	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	-162	-399	-162	399	multi-exon	FALSE	canonical	0	0	junction_4	2.23257138743647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	121888357	122228277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
ES.31857.3	chr7	+	3749	16	NIC	ENSMUSG00000052889.12	novel	2911	17	NA	NA	-161	395	intron_retention	FALSE	canonical	0	0	junction_4	2.19696760710454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	121888358	122228273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122194297_122199912_122200054_122226878
ES.31858.1	chr7	+	173	1	Intergenic	novelGene_26108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAGTAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	122278735	122278908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122278700_122278900
ES.31859.1	chr7	+	154	1	Intergenic	novelGene_26109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAATAAATC	8227	False	NA	NA	False	NA	NA	NA	122450234	122450388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122450200_122450400
ES.3186.1	chr10	+	178	1	Intergenic	novelGene_2501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	77337301	77337479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77337300_77337500
ES.31860.1	chr7	-	174	1	Intergenic	novelGene_26110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	122533889	122533715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122533700_122533900
ES.31861.1	chr7	+	177	1	Intergenic	novelGene_26111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGGGTTCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	122535663	122535840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122535700_122535800
ES.31862.1	chr7	-	223	1	Intergenic	novelGene_26112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTACAACTCCTCA	NA	False	NA	NA	False	NA	NA	NA	122566983	122566760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122566800_122567000
ES.31863.11	chr7	+	2752	4	ISM	ENSMUSG00000030779.17	ENSMUST00000231323.2	5331	19	-973	17550	-628	-7	5prime_fragment	FALSE	canonical	3	98	junction_3	12.5521135891752	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGTTGCTTGTTTTG	6938	False	NA	NA	False	AATAAA	-6	NA	122569158	122583608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185
ES.31863.12	chr7	+	2936	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-627	-3136	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAGAAAAAAAGAAAAAGAA	6939	False	NA	NA	False	NA	NA	NA	122569159	122572095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122569200_122572100
ES.31863.13	chr7	+	6704	17	NNC	ENSMUSG00000030779.17	novel	5728	17	NA	NA	-627	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.416307469211	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAAATGTATATTAT	6939	False	NA	16	True	AATAAA	-22	NA	122569159	122601781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584888_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.15	chr7	+	6631	17	NNC	ENSMUSG00000030779.17	novel	5728	17	NA	NA	-627	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.3804776094947	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6939	False	NA	13	True	AATAAA	-19	NA	122569159	122601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589343_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.16	chr7	+	4476	17	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-627	2639	-627	-2017	5prime_fragment	FALSE	canonical	3	62	junction_15	16.5452740608912	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAAGAAAAGAGTGTAGAT	6939	False	NA	26	True	AATAAA	-38	NA	122569159	122599141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747
ES.31863.17	chr7	+	7112	17	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-626	2	-626	1	intron_retention	FALSE	canonical	3	62	junction_15	16.5452740608912	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6940	False	NA	13	True	AATAAA	-19	NA	122569160	122601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747
ES.31863.18	chr7	+	1725	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-755	5375	-619	256	multi-exon	FALSE	canonical	3	123	junction_1	1.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGCCATTTCCACGT	6947	False	NA	NA	False	AATAAA	-17	NA	122569167	122578240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122570351_122575158_122575259_122577798
ES.31863.19	chr7	+	4730	17	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-605	2363	-605	-1741	5prime_fragment	FALSE	canonical	3	62	junction_15	16.5452740608912	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAACAGGAAAAAGTCAAG	6961	False	NA	NA	False	NA	NA	NA	122569181	122599417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747
ES.31863.2	chr7	+	6706	16	NIC	ENSMUSG00000030779.17	novel	5728	17	NA	NA	-671	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	32.3639030746018	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6895	False	NA	13	True	AATAAA	-19	NA	122569115	122601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122570351_122575158_122575259_122577798_122577836_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.20	chr7	+	4728	9	NNC	ENSMUSG00000030779.17	novel	542	4	NA	NA	-602	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.9053786194432	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	6964	False	NA	13	True	AATAAA	-19	NA	122569184	122601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122569365_122589447_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.21	chr7	+	8815	17	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	2175	2	1821	1	3prime_fragment	FALSE	canonical	3	62	junction_14	18.8729303501073	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTGCAAATGTATAT	9741	False	NA	13	True	AATAAA	-19	NA	122571961	122601778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ES.31863.22	chr7	+	2793	3	FSM	ENSMUSG00000030779.17	ENSMUST00000206179.2	809	3	-1147	-837	-929	1	multi-exon	FALSE	canonical	3	98	junction_2	14	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGTTTTGTGGATGAA	NA	False	NA	NA	False	AATAAA	-14	NA	122573933	122583616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122575259_122577798_122577836_122582185
ES.31863.23	chr7	+	1617	1	NIC	ENSMUSG00000030779.17	novel	6184	18	NA	NA	236	2	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTGTGGATGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	122582000	122583617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122582000_122583600
ES.31863.24	chr7	+	5430	14	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	14427	10	2449	-7	3prime_fragment	FALSE	canonical	3	62	junction_11	19.5542032285983	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCACTTGTTGCAA	NA	False	NA	5	True	AATAAA	-11	NA	122584213	122601770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ES.31863.25	chr7	+	5111	12	NNC	ENSMUSG00000030779.17	novel	6184	18	NA	NA	3117	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	32.8089888912492	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTTGCAAATGTATA	NA	False	NA	12	True	AATAAA	-18	NA	122584881	122601777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599942
ES.31863.27	chr7	+	4498	8	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	21397	4	1831	-1	3prime_fragment	FALSE	canonical	3	62	junction_5	25.7111109151238	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTGTTGCAAATGTAT	NA	False	NA	11	True	AATAAA	-17	NA	122591183	122601776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ES.31863.28	chr7	+	176	1	FSM	ENSMUSG00000108551.2	ENSMUST00000206967.2	584	1	393	15	393	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	122594963	122595139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122595000_122595100
ES.31863.29	chr7	+	4381	3	ISM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	25733	3	-3628	0	3prime_fragment	FALSE	canonical	3	56	junction_1	44	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTTGCAAATGTATA	NA	False	NA	12	True	AATAAA	-18	NA	122595873	122601777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122596529_122597747_122599503_122599806
ES.31863.3	chr7	+	2944	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-807	4208	-671	1423	multi-exon	FALSE	canonical	3	123	junction_1	1.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTGTTCCCTGGCA	6895	False	NA	NA	False	AATAAA	-16	NA	122569115	122579407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122570351_122575158_122575259_122577798
ES.31863.30	chr7	+	3514	3	ISM	ENSMUSG00000030779.17	ENSMUST00000231323.2	5331	19	26707	-325	-2663	-294	3prime_fragment	FALSE	canonical	3	68	junction_1	38	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGCTGCTTGATTATT	NA	False	NA	NA	False	AATGAA	-27	NA	122596838	122601483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122596921_122597747_122599503_122599806
ES.31863.4	chr7	+	6869	18	FSM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	-670	-15	-670	15	multi-exon	FALSE	canonical	3	62	junction_15	18.9192419579373	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTAAAGACAGTGTC	6896	False	NA	30	True	AATAAA	-36	NA	122569116	122601795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ES.31863.5	chr7	+	6752	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	-1024	0	-670	0	multi-exon	FALSE	canonical	3	56	junction_15	18.1597726789186	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	6896	False	NA	15	True	AATAAA	-21	NA	122569116	122601780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.6	chr7	+	1608	3	FSM	ENSMUSG00000030779.17	ENSMUST00000098062.9	6345	3	-805	5542	-669	89	multi-exon	FALSE	canonical	3	123	junction_1	1.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACTGTTGTACAGTAA	6897	False	NA	NA	False	ATTAAA	-21	NA	122569117	122578073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122570351_122575158_122575259_122577798
ES.31863.7	chr7	+	1103	1	NIC	ENSMUSG00000030779.17	novel	478	4	NA	NA	-669	-5011	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGACACCGTCACTTT	6897	False	NA	98	True	TATAAA	-16	NA	122569117	122570220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122569100_122570200
ES.31863.8	chr7	+	5790	18	NNC	ENSMUSG00000030779.17	novel	6184	18	NA	NA	-669	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	29.9264380690675	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTGTTGCAAATGTAT	6897	False	NA	11	True	AATAAA	-17	NA	122569117	122601776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122569213_122570169_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ES.31863.9	chr7	+	4973	10	NNC	ENSMUSG00000030779.17	novel	542	4	NA	NA	-646	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.7068756453194	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCACTTGTTGCA	6920	False	NA	4	True	AATAAA	-10	NA	122569140	122601769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122569382_122589356_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ES.31864.1	chr7	-	177	1	Intergenic	novelGene_26113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGAGCATTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	122614910	122614733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122614700_122614900
ES.31865.1	chr7	-	136	1	Intergenic	novelGene_26114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTAACCT	NA	False	NA	NA	False	NA	NA	NA	122623006	122622870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122622900_122623000
ES.31866.1	chr7	+	2577	3	FSM	ENSMUSG00000109814.2	ENSMUST00000211504.2	662	3	-45	-1870	-45	4	multi-exon	FALSE	canonical	2	5	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTATGGTTTTTTA	1691	False	NA	NA	False	NA	NA	NA	122630592	122667532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122630774_122660895_122661022_122665262
ES.31866.2	chr7	+	6801	2	ISM	ENSMUSG00000109814.2	ENSMUST00000209402.2	1880	4	-111	0	-32	0	intron_retention	FALSE	canonical	2	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGGTTATGGTTT	1704	False	NA	NA	False	NA	NA	NA	122630605	122667528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122630774_122660895
ES.31866.4	chr7	+	177	1	Intergenic	novelGene_26115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122645279	122645456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122645300_122645500
ES.31866.5	chr7	+	262	1	Intergenic	novelGene_26116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	122653254	122653516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122653300_122653500
ES.31867.1	chr7	-	1403	1	Intergenic	novelGene_26117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	122662668	122661265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122661300_122662700
ES.31868.1	chr7	-	170	1	Intergenic	novelGene_26118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	122694079	122693909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122693900_122694100
ES.31869.1	chr7	+	7227	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	-319	1275	-23	34	multi-exon	TRUE	canonical	3	73	junction_8	29.037424518788	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGCTTCGAGCTGGAGTT	NA	False	NA	NA	False	NA	NA	NA	122723084	122793244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.10	chr7	+	4898	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	584	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	32.7131282565666	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTCTTTTTTGTGGATT	NA	False	NA	17	True	AATAAA	-29	NA	122723380	122793794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.100	chr7	+	5212	16	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	263	0	intron_retention	FALSE	non_canonical	0	0	junction_15	40.4185875832175	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122773700	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.102	chr7	+	5364	16	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	2161	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.6660759460543	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTAAGTGGTT	NA	False	NA	13	True	AATAAA	-12	NA	122775598	122794511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122776603_122776639_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.103	chr7	+	4641	13	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	2515	27	intron_retention	FALSE	non_canonical	0	0	junction_12	40.9806865079963	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122775952	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122792152_122792487
ES.31869.104	chr7	+	3071	13	ISM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	55534	1318	-206	0	3prime_fragment	FALSE	canonical	3	110	junction_3	19.5154853044106	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122778937	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.105	chr7	+	3748	2	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	8499	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122787642	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122788259_122790069
ES.31869.106	chr7	+	4228	2	NNC	ENSMUSG00000052707.9	novel	3297	12	NA	NA	9509	32	intron_retention	FALSE	non_canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCGCTTCGAGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	122788652	122793242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122789713_122790074
ES.31869.107	chr7	+	2535	4	NNC	ENSMUSG00000052707.9	novel	3297	12	NA	NA	10910	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.1044324370336	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCTCTTTTTTGTGGA	NA	False	NA	15	True	AATAAA	-27	NA	122790053	122793792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.11	chr7	+	7585	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.185650991831	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCTCTTTTTTGTGGA	NA	False	NA	15	True	AATAAA	-27	NA	122723380	122793792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122752208_122752315_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.12	chr7	+	6848	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	20	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_13	36.0297608553927	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723380	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.14	chr7	+	3976	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.0328992270656	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723380	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.15	chr7	+	4560	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-19	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.1396717268388	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCTCTTTTTTGTGGA	NA	False	NA	15	True	AATAAA	-27	NA	122723380	122793792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.16	chr7	+	6593	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-18	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	38.1003791173905	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCGCTTCGAGCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	122723381	122793243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.17	chr7	+	3623	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-18	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.9729528820394	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723381	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122761904_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.18	chr7	+	6511	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-18	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	42.8961115823904	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723381	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.19	chr7	+	6551	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-18	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.1075015732066	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAACGCG	NA	False	NA	NA	False	NA	NA	NA	122723381	122793229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792146_122792487
ES.31869.2	chr7	+	7205	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-9	27	intron_retention	FALSE	non_canonical	0	0	junction_23	38.7825599531766	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723098	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.20	chr7	+	1265	6	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.4004219390503	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723385	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122761934_122792481
ES.31869.22	chr7	+	4340	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-14	31	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	32.7131282565666	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCGCTTCGAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	122723385	122793241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.23	chr7	+	8023	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-13	24	intron_retention	FALSE	non_canonical	0	0	junction_14	38.3044567244946	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAACGCGCTTCG	NA	False	NA	NA	False	NA	NA	NA	122723386	122793234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781466_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.24	chr7	+	6540	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-12	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.7468742816433	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723387	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792144_122792480
ES.31869.25	chr7	+	7088	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-12	582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	45.6030791916295	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCTCTTTTTTGTGGA	NA	False	NA	15	True	AATAAA	-27	NA	122723387	122793792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.26	chr7	+	7430	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-10	575	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	33.5151686393731	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTAATTGTCTCTTTT	NA	False	NA	8	True	AATAAA	-20	NA	122723389	122793785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.27	chr7	+	3293	21	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-10	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	38.9505776593878	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723389	122793225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789154_122792481
ES.31869.29	chr7	+	3989	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-10	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.1396717268388	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723389	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.3	chr7	+	4436	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-6	20	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	38.0311961695418	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723101	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.30	chr7	+	8272	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-9	20	intron_retention	FALSE	canonical	3	73	junction_8	28.2461509116254	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723390	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.31	chr7	+	6959	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-7	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	44.7197872870612	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723392	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774777_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792037_122792077
ES.31869.32	chr7	+	6878	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-6	27	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	33.5151686393731	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723393	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.33	chr7	+	5006	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-6	25	intron_retention	FALSE	canonical	3	38	junction_5	33.4819137558299	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAACGCGCTTCGA	NA	False	NA	NA	False	NA	NA	NA	122723393	122793235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.34	chr7	+	3615	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-5	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.9729528820394	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723394	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122761896_122773353_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.35	chr7	+	6730	22	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.6526548075139	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723395	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122742972_122743064_122761792_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.36	chr7	+	6807	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-4	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.5753544227459	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723395	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743064_122761792_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.37	chr7	+	3813	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	1	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	45.502792576186	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCGCTTCGAGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	122723400	122793242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.38	chr7	+	6850	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	38.1003791173905	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723401	122793225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792037_122792077
ES.31869.39	chr7	+	4727	20	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-1	578	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	47.3411617471294	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	11	True	AATAAA	-23	NA	122723402	122793788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122761716_122762101_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.4	chr7	+	4268	21	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	47.8678127764367	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723136	122793199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.40	chr7	+	6744	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	43.2942785806985	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723403	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.41	chr7	+	4278	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	0	20	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	37.0719714307135	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723403	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.42	chr7	+	7455	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	1	727	1	582	multi-exon	FALSE	canonical	3	73	junction_8	29.037424518788	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCTCTTTTTTGTGGA	NA	False	NA	15	True	AATAAA	-27	NA	122723404	122793792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.43	chr7	+	6782	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	2	20	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	39.7519519907492	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723405	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.44	chr7	+	4239	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	3	20	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	39.2852463211369	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723406	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.45	chr7	+	7113	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	3	578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	38.1003791173905	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	11	True	AATAAA	-23	NA	122723406	122793788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.46	chr7	+	4068	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	3	37	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	32.7131282565666	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGTGGTTTAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	122723406	122792990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.47	chr7	+	6257	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	5	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	45.5239697102726	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAACGCGCTTCG	NA	False	NA	NA	False	NA	NA	NA	122723408	122793234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.48	chr7	+	7075	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	6	576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.7468742816433	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAATTGTCTCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	122723409	122793786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.49	chr7	+	4126	10	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	6	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.4001696350096	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723409	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122770378_122789117_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.5	chr7	+	6565	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-29	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.7468742816433	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723370	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.50	chr7	+	4216	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	20	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	42.6513046324268	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723410	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.51	chr7	+	4800	22	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	55.7035398672427	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723410	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723888_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122773366_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792144_122792480
ES.31869.52	chr7	+	4370	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.3130809932765	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723410	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774777_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.53	chr7	+	4021	8	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.3551451577569	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723410	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122770600_122791357_122791422_122791801
ES.31869.54	chr7	+	4263	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	7	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	41.1396717268388	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723410	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792037_122792077
ES.31869.55	chr7	+	5409	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	8	20	intron_retention	FALSE	canonical	3	38	junction_5	31.2508684686578	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723411	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.57	chr7	+	6511	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.7147914985195	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723413	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723892_122723939_122742972_122743080_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792144_122792482
ES.31869.58	chr7	+	4973	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	10	576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.3720829740328	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAATTGTCTCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	122723413	122793786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122745493_122745643_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.60	chr7	+	4091	21	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	10	20	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	42.2401171873374	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723413	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.61	chr7	+	6762	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	39.3653159414929	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723418	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.62	chr7	+	7368	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	15	578	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_13	36.0297608553927	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	11	True	AATAAA	-23	NA	122723418	122793788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.63	chr7	+	4663	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	17	578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	52.1544181573655	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	11	True	AATAAA	-23	NA	122723420	122793788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779471_122779619_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.64	chr7	+	3929	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	17	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	44.8049261237944	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723420	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792144_122792482
ES.31869.65	chr7	+	6993	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19	576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	46.2957126057163	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAATTGTCTCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	122723422	122793786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.66	chr7	+	6252	20	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.8447262927239	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723422	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122768758_122771342_122772455_122772633_122773366_122773543_122776044_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.67	chr7	+	7058	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19	581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.562549177698	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTCTCTTTTTTGTGG	NA	False	NA	14	True	AATAAA	-26	NA	122723422	122793791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743064_122761706_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.68	chr7	+	9834	22	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19	577	intron_retention	FALSE	canonical	3	22	junction_11	34.9845446925773	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTAATTGTCTCTTTTTT	NA	False	NA	10	True	AATAAA	-22	NA	122723422	122793787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.69	chr7	+	6685	22	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19	20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	48.2272586897247	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723422	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.7	chr7	+	4234	21	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-22	27	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	43.1885112037912	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122723377	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.70	chr7	+	6833	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.7765154113674	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723425	122793199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742980_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.71	chr7	+	4776	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	22	576	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	39.2852463211369	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAATTGTCTCTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	122723425	122793786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.74	chr7	+	7334	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	26	574	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	39.3653159414929	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATTAATTGTCTCTTT	NA	False	NA	7	True	AATAAA	-19	NA	122723429	122793784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.75	chr7	+	6982	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	26	578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	51.2087770111258	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTAATTGTCTCTTTTTTG	NA	False	NA	11	True	AATAAA	-23	NA	122723429	122793788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791279_122791422_122791801_122792152_122792487
ES.31869.77	chr7	+	3904	25	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	27	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	51.9775425597975	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723430	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786714_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792037_122792077_122792152_122792487
ES.31869.78	chr7	+	6373	21	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	27	20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.980589040183	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723430	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.79	chr7	+	3880	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	44.8049261237944	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122723436	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.8	chr7	+	4432	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-21	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.9760888773747	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAACGCG	NA	False	NA	NA	False	NA	NA	NA	122723378	122793229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122745545_122745643_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.80	chr7	+	9325	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-35	20	intron_retention	FALSE	canonical	3	78	junction_5	26.0797660076032	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723443	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.81	chr7	+	6993	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	92	20	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	36.6974732843359	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723570	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.82	chr7	+	7848	22	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	420	20	intron_retention	FALSE	canonical	3	73	junction_6	29.1888836666498	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122723898	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.84	chr7	+	7074	23	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	19557	580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.5191396249237	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTGTCTCTTTTTTGTG	NA	False	NA	13	True	AATAAA	-25	NA	122743035	122793790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122743061_122751386_122751409_122761716_122762101_122768758_122769382_122769498_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.85	chr7	+	176	1	Intergenic	novelGene_26120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	122747428	122747604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122747400_122747600
ES.31869.86	chr7	+	2179	1	Intergenic	novelGene_26122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTTGGGATCCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	122766090	122768269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_122766100_122768300
ES.31869.88	chr7	+	4284	20	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	-343	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.7256805770072	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAAAAAACGCGC	NA	False	NA	NA	False	NA	NA	NA	122770266	122793230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122771342_122772458_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.89	chr7	+	4396	17	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	-95	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.9686904080421	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAACGCG	NA	False	NA	NA	False	NA	NA	NA	122770514	122793229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122770884_122773884_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.9	chr7	+	8204	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	-23	2	-19	-2	multi-exon	FALSE	canonical	3	73	junction_8	29.037424518788	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAAGTGGTTTTGCTT	NA	False	NA	19	True	AATAAA	-18	NA	122723380	122794517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.90	chr7	+	4682	19	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	-105	581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.4257296427944	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTCTCTTTTTTGTGG	NA	False	NA	14	True	AATAAA	-26	NA	122770763	122793791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792037_122792077
ES.31869.92	chr7	+	5073	20	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	40.9366783502158	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGGTTTTGCTTTT	NA	False	NA	21	True	AATAAA	-20	NA	122770838	122794519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801_122792152_122792487
ES.31869.93	chr7	+	7677	16	NIC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	-7	15	intron_retention	FALSE	canonical	3	108	junction_1	20.3583452722028	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122770861	122793225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122772633_122773366_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.94	chr7	+	5935	16	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	50	27	intron_retention	FALSE	canonical	3	22	junction_6	38.3113560188099	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACGCGCTTCGAGC	NA	False	NA	NA	False	NA	NA	NA	122772130	122793237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122772633_122773366_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.95	chr7	+	3800	18	NNC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	38.6248033331686	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122772174	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.96	chr7	+	5292	16	NIC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	511	0	intron_retention	FALSE	canonical	3	85	junction_1	23.504514932715	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122772591	122793201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.97	chr7	+	5938	15	NIC	ENSMUSG00000052707.9	novel	5223	20	NA	NA	-103	15	intron_retention	FALSE	canonical	3	110	junction_5	18.8203103489994	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122773334	122793225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.98	chr7	+	3440	17	ISM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	49962	1290	-72	19	3prime_fragment	FALSE	canonical	3	73	junction_1	28.0490641555115	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAACGCG	NA	False	NA	NA	False	NA	NA	NA	122773365	122793229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.31869.99	chr7	+	4842	16	ISM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	50226	730	192	579	3prime_fragment	FALSE	canonical	3	85	junction_1	23.504514932715	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTGTCTCTTTTTTGT	NA	False	NA	12	True	AATAAA	-24	NA	122773629	122793789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ES.3187.1	chr10	+	178	1	Intergenic	novelGene_2502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATGACTATCT	NA	False	NA	NA	False	NA	NA	NA	77340324	77340502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77340300_77340500
ES.31870.1	chr7	-	4333	1	Intergenic	novelGene_26119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCTCAAAACAGAAAATCAA	NA	False	NA	NA	False	AAAAAG	-4	NA	122735057	122730724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122730700_122735100
ES.31871.1	chr7	-	1428	1	Intergenic	novelGene_26121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122759325	122757897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122757900_122759300
ES.31872.1	chr7	+	2538	20	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-2933	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.02750490863042	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122811069	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122811165_122814069_122814221_122828131_122828215_122832210_122832328_122834436_122834508_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864879_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.10	chr7	+	1613	9	ISM	ENSMUSG00000030769.16	ENSMUST00000167299.9	2022	15	16666	-47	11963	-3	3prime_fragment	FALSE	canonical	3	14	junction_3	5.89358761706314	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122851508	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.11	chr7	+	2337	7	NNC	ENSMUSG00000030769.16	novel	242	3	NA	NA	-1683	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0365554207622	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTTCAGAGGTGCTGC	NA	False	NA	11	True	AATAAA	-18	NA	122862728	122872472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122864004_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.2	chr7	+	2504	19	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-2900	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.41882077311761	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122811102	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122811165_122814069_122814221_122828131_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.3	chr7	+	2424	19	NNC	ENSMUSG00000030769.16	novel	2022	15	NA	NA	-2900	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.54562916219618	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122811102	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122811169_122828135_122828215_122832210_122832328_122834436_122834508_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.4	chr7	+	2706	21	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-2886	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.27617917032654	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122811116	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122811200_122811303_122811414_122814069_122814221_122828131_122828215_122832210_122832328_122834436_122834508_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.5	chr7	+	2670	19	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-324	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.18912256563923	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCAGAGGTGCTGCT	NA	False	NA	12	True	AATAAA	-19	NA	122813678	122872473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122813907_122814069_122814221_122828131_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.6	chr7	+	2643	20	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-234	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.68341304153278	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAGAGCTTCAGAGGTG	NA	False	NA	7	True	AATAAA	-14	NA	122813768	122872468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122813907_122814072_122814221_122828131_122828215_122832210_122832328_122834436_122834508_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31872.8	chr7	+	3002	19	NNC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	-195	1215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.95754733847316	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGTTTTACCTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	122813807	122873691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122814221_122828135_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223_122872433_122873348
ES.31872.9	chr7	+	2509	18	NIC	ENSMUSG00000030769.16	novel	2396	17	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	7.39025824684207	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGAGGTGCTGCTGA	NA	False	NA	14	True	AATAAA	-21	NA	122814004	122872475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122814221_122828131_122828215_122832210_122832328_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ES.31873.1	chr7	-	179	1	Intergenic	novelGene_26123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122816404	122816225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122816200_122816400
ES.31874.1	chr7	-	175	1	Intergenic	novelGene_26124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	122836949	122836774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122836800_122836900
ES.31875.1	chr7	-	4587	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-4	1145	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAAATTTATTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	122969113	122877295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.11	chr7	-	3309	19	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	53.6950982888281	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969122	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
ES.31875.12	chr7	-	3611	22	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-149	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	66.8520551584734	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969287	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122884642_122884691_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.13	chr7	-	3438	21	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.275285150715	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969169	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879333_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.14	chr7	-	6112	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_19	48.7393428936662	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969164	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.15	chr7	-	3303	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	61.9859692818595	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969108	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.16	chr7	-	8281	3	NIC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	357	0	intron_retention	FALSE	canonical	3	132	junction_1	19.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122895456	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122886237_122891258
ES.31875.17	chr7	-	3295	20	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	31379	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_19	52.1177550150775	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122937695	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122937603
ES.31875.18	chr7	-	5103	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_19	49.4979783576647	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969123	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.19	chr7	-	7145	1	FSM	ENSMUSG00000030766.16	ENSMUST00000206803.2	3305	1	-174	-3666	-174	0	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122885638	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122878500_122885600
ES.31875.2	chr7	-	3613	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-70	76	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCACTTGGGAGGCAGA	NA	False	NA	NA	False	AATAAA	-20	NA	122969208	122878364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.20	chr7	-	5825	19	NIC	ENSMUSG00000030766.16	novel	3102	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_18	61.5997885598423	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969111	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.21	chr7	-	8228	17	NIC	ENSMUSG00000030766.16	novel	3102	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_16	57.374557460167	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969103	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122885720_122886237_122891258_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.22	chr7	-	3097	19	NNC	ENSMUSG00000030766.16	novel	3102	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	74.1164624088333	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969110	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921201_122922828_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.24	chr7	-	5654	17	NIC	ENSMUSG00000030766.16	novel	3102	19	NA	NA	-129	0	intron_retention	FALSE	canonical	0	0	junction_2	66.7485662299199	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969267	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122886237_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.25	chr7	-	3283	21	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	33611	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.6166713260645	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122935463	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879306_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122935398
ES.31875.26	chr7	-	3379	21	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	60.0252238646388	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCTAATTCTTAGAG	NA	False	NA	-4	True	ATTAAA	-22	NA	122969112	122878496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926467_122926567_122930448_122930489_122968976
ES.31875.27	chr7	-	3200	17	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-26041	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	56.3347971949842	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122921854	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122921634
ES.31875.28	chr7	-	3377	20	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969145	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
ES.31875.29	chr7	-	5013	11	ISM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	58988	4	-14308	0	3prime_fragment	FALSE	canonical	3	69	junction_1	32.4507318869698	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122910121	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508
ES.31875.3	chr7	-	3477	20	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	5	67	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTAGTTTCAGCACTTG	NA	False	NA	NA	False	AATAAA	-11	NA	122969121	122878373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
ES.31875.31	chr7	-	3880	4	ISM	ENSMUSG00000030766.16	ENSMUST00000206117.2	3311	20	75395	-5	2082	0	intron_retention	FALSE	canonical	3	126	junction_2	19.94993734326	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122893731	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258
ES.31875.33	chr7	-	3357	21	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	33567	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_20	47.5660330488049	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122935507	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122935398
ES.31875.34	chr7	-	4103	7	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-1397	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	58.5531572353039	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122897210	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122884691_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717
ES.31875.35	chr7	-	3320	20	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.7490788606015	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969103	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895784_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.36	chr7	-	3338	20	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	63.1085772361858	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969122	122878497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917616_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.38	chr7	-	3276	19	NNC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-26046	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.3173441755013	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGCTAATTCTTA	NA	False	NA	-7	True	ATTAAA	-19	NA	122921859	122878499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122884666_122884691_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122921634
ES.31875.39	chr7	-	3362	21	NNC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.275285150715	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGCTAATTCTTA	NA	False	NA	-7	True	ATTAAA	-19	NA	122969126	122878499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879306_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.4	chr7	-	3508	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-158	-14	-129	14	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAAATTCTGGGATATA	NA	False	NA	13	True	ATTAAA	-39	NA	122969267	122878479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.40	chr7	-	3223	20	FSM	ENSMUSG00000030766.16	ENSMUST00000205262.2	3036	20	-79	-108	-49	-2	multi-exon	FALSE	canonical	0	0	junction_19	60.4560690757234	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGCTAATTCTTA	NA	False	NA	-7	True	ATTAAA	-19	NA	122969187	122878499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.41	chr7	-	3154	19	NIC	ENSMUSG00000030766.16	novel	3036	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	61.5997885598423	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	False	NA	-10	True	ATTAAA	-16	NA	122969161	122878502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
ES.31875.42	chr7	-	3333	21	NNC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	33606	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	48.4230317101274	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	False	NA	-10	True	ATTAAA	-16	NA	122935468	122878502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122935378
ES.31875.43	chr7	-	3382	21	NNC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	59.5822750488767	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	False	NA	-10	True	ATTAAA	-16	NA	122969103	122878502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913731_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.44	chr7	-	7302	18	NIC	ENSMUSG00000030766.16	novel	3036	20	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_17	55.6880833729963	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	False	NA	-10	True	ATTAAA	-16	NA	122969114	122878502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122885720_122886237_122891258_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.45	chr7	-	3095	19	FSM	ENSMUSG00000030766.16	ENSMUST00000098060.5	3102	19	-3	10	-3	-1	multi-exon	FALSE	canonical	0	0	junction_18	64.8370226504336	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAAAACTTGCTAATT	NA	False	NA	-11	True	ATTAAA	-15	NA	122969112	122878503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.47	chr7	-	3012	19	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-30665	2	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	28.8371331257734	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAACAAA	NA	False	NA	NA	False	AATATA	-12	NA	122926478	122878605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461
ES.31875.48	chr7	-	3162	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-81	-219	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTACTTCCTGCTACT	NA	False	NA	-6	True	AATAAA	-16	NA	122969219	122878826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.49	chr7	-	5729	20	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	-5	-219	intron_retention	FALSE	canonical	0	0	junction_19	48.7393428936662	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTACTTCCTGCTACT	NA	False	NA	-6	True	AATAAA	-16	NA	122969114	122878826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.5	chr7	-	3543	21	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-129	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969267	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.50	chr7	-	3008	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	-5	333	-5	-219	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTACTTCCTGCTACT	NA	False	NA	-6	True	AATAAA	-16	NA	122969114	122878826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.51	chr7	-	2960	20	FSM	ENSMUSG00000030766.16	ENSMUST00000205262.2	3036	20	-147	223	-117	-223	multi-exon	FALSE	canonical	0	0	junction_19	60.4560690757234	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGCCTACTTCCTGC	NA	False	NA	-10	True	AATAAA	-12	NA	122969255	122878830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.52	chr7	-	2765	19	NNC	ENSMUSG00000030766.16	novel	3102	19	NA	NA	-2	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	64.8370226504336	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGCCTACTTCCTGC	NA	False	NA	-10	True	AATAAA	-12	NA	122969111	122878830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968978
ES.31875.53	chr7	-	1601	15	FSM	ENSMUSG00000030766.16	ENSMUST00000206294.2	3658	15	35	2022	-2	-2022	multi-exon	FALSE	canonical	0	0	junction_14	55.1393873815835	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGCTTGCATAGTAT	NA	False	NA	NA	False	NA	NA	NA	122969103	122896523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31875.54	chr7	-	205	1	Intergenic	novelGene_26125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATACATA	NA	False	NA	NA	False	NA	NA	NA	122944283	122944078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_122944100_122944300
ES.31875.8	chr7	-	3287	20	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-34154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	48.7393428936662	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122929967	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122929892
ES.31875.9	chr7	-	3441	20	NNC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	61.1729757653567	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969248	122878493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_122879306_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ES.31876.1	chr7	+	1932	2	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	1	-15061	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGTAGTCTTGGT	6825	False	NA	NA	False	NA	NA	NA	122977205	122985639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122977479_122983980
ES.31876.10	chr7	+	3947	6	ISM	ENSMUSG00000030763.8	ENSMUST00000206574.2	1286	11	29443	11	-681	-6	3prime_fragment	FALSE	canonical	3	242	junction_1	27.6723688902848	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTCAGACTCTGCT	3075	False	NA	11	True	AATAAA	-11	NA	123006721	123029561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ES.31876.11	chr7	+	5313	5	NNC	ENSMUSG00000030763.8	novel	1286	11	NA	NA	-4613	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	128.357654621764	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCTACATCTGTACA	2654	False	NA	22	True	AATAAA	-22	NA	123012752	123029572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_123017562_123020760_123020863_123021929_123022022_123027321_123027415_123029355
ES.31876.12	chr7	+	5652	4	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-1753	0	intron_retention	FALSE	canonical	3	296	junction_1	10.7082522694727	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGACTCTGCTACATCT	5514	False	NA	17	True	AATAAA	-17	NA	123015612	123029567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_123020863_123021929_123022022_123027316_123027415_123029355
ES.31876.13	chr7	+	5725	1	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-3240	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGACTCTGCTACATCT	NA	False	NA	17	True	AATAAA	-17	NA	123023842	123029567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_123023800_123029600
ES.31876.14	chr7	+	2627	2	FSM	ENSMUSG00000030763.8	ENSMUST00000206727.2	548	2	-2079	0	-2079	0	multi-exon	FALSE	canonical	3	322	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	NA	False	NA	21	True	AATAAA	-21	NA	123025003	123029571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_123027415_123029355
ES.31876.2	chr7	+	1339	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	30	0	30	0	multi-exon	FALSE	canonical	0	0	junction_5	88.7783757454483	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGTACAATGACATTC	6854	False	NA	31	True	AATAAA	-31	NA	122977234	123029581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ES.31876.3	chr7	+	2392	10	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_5	92.2352065825915	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGACTCTGCTACATCT	6854	False	NA	17	True	AATAAA	-17	NA	122977234	123029567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123022022_123027316_123027415_123029355
ES.31876.4	chr7	+	1215	10	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	92.0315297554909	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGCTACATCTGTACAA	6880	False	NA	23	True	AATAAA	-23	NA	122977260	123029573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003721_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ES.31876.6	chr7	+	1314	11	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.7783757454483	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTCTGCTACATCTGT	6880	False	NA	19	True	AATAAA	-19	NA	122977260	123029569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003721_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ES.31876.7	chr7	+	2070	7	NNC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_2	143.108059405006	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACTCTGCTACATCTG	6900	False	NA	18	True	AATAAA	-18	NA	122977280	123029568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_122977479_122999660_122999753_123009946_123010034_123017440_123017562_123020760_123022022_123027316_123027415_123029355
ES.31876.8	chr7	+	1181	10	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	114.483811999237	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGACTCTGCTACATCT	6900	False	NA	17	True	AATAAA	-17	NA	122977280	123029567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123029355
ES.31877.1	chr7	+	1721	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	-233	-1	-233	1	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTGACTTGTCTTT	4143	False	NA	8	True	AATAAA	-22	NA	123061280	123067228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
ES.31877.2	chr7	+	1198	5	NNC	ENSMUSG00000030762.12	novel	1159	5	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3895116933639	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCAGGTGTCTGTTGA	5802	False	NA	-1	True	AATAAA	-13	NA	123062939	123067219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_123063069_123063408_123063539_123064331_123064547_123065808_123065944_123066630
ES.31877.3	chr7	+	2464	1	NIC	ENSMUSG00000030762.12	novel	1487	6	NA	NA	1789	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCTGTTGACTTGTCT	7625	False	NA	6	True	AATAAA	-20	NA	123064762	123067226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_123064800_123067200
ES.31878.1	chr7	-	7927	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-98	2	-98	-2	multi-exon	FALSE	canonical	1	4	junction_1	4.54606056566195	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAAGGATGTCTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	123099770	123074608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ES.31878.10	chr7	-	2320	3	FSM	ENSMUSG00000030757.14	ENSMUST00000128217.2	2218	3	-107	5	-107	-5	multi-exon	FALSE	canonical	3	13	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAACCTTGGTAGCACA	NA	False	NA	NA	False	AATAAA	-18	NA	123099779	123093441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_123094587_123097808_123097996_123098791
ES.31878.3	chr7	-	5271	8	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-137	-381	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.98637909707342	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATGCAGCGTCATGTTG	NA	False	NA	NA	False	AATAGA	-12	NA	123099809	123077347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_123079996_123081863_123081908_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ES.31878.4	chr7	-	3756	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-151	4226	-151	532	multi-exon	FALSE	canonical	1	4	junction_1	4.54606056566195	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATGTTGAGGCTAATGC	NA	False	NA	NA	False	AATAAA	-42	NA	123099823	123078832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ES.31878.5	chr7	-	3739	8	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-106	516	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.98637909707342	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATTCTCACTAGA	NA	False	NA	NA	False	AATAAA	-26	NA	123099778	123078848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_123079996_123081863_123081908_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ES.31878.6	chr7	-	3621	5	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-91	-4070	intron_retention	FALSE	canonical	1	6	junction_1	4.03112887414927	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAGAGAAAGAAAG	NA	False	NA	NA	False	AAAACA	-19	NA	123099763	123083434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_123084655_123088801_123089486_123094028_123094587_123097808_123097996_123098791
ES.31878.7	chr7	-	3396	5	ISM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	-158	12907	-158	5923	5prime_fragment	FALSE	canonical	3	12	junction_2	1.87082869338697	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCATAATCTTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	123099830	123087513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ES.31878.8	chr7	-	3690	4	NIC	ENSMUSG00000030757.14	novel	7831	7	NA	NA	-100	5915	intron_retention	FALSE	canonical	3	13	junction_2	1.69967317119759	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAGTCACCATAATC	NA	False	NA	NA	False	NA	NA	NA	123099772	123087521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_123089486_123094028_123094587_123097808_123097996_123098791
ES.31878.9	chr7	-	5610	2	NIC	ENSMUSG00000030757.14	novel	2218	3	NA	NA	-171	-1	intron_retention	FALSE	canonical	3	14	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGGTAGCACATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	123099843	123093437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_123097996_123098791
ES.31879.1	chr7	-	181	1	Intergenic	novelGene_26126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGAACTGTAC	NA	False	NA	NA	False	NA	NA	NA	123108132	123107951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_123108000_123108100
ES.3188.1	chr10	-	8730	2	ISM	ENSMUSG00000032977.10	ENSMUST00000217681.2	780	5	10401	-1526	10401	0	3prime_fragment	FALSE	canonical	3	274	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	77332748	77322494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_77324308_77325831
ES.3188.10	chr10	-	166	1	Intergenic	novelGene_2500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77329673	77329507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77329500_77329700
ES.3188.2	chr10	-	2476	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-85	3	-85	-3	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGCAGTCCCCTGGCT	NA	False	NA	-10	True	AATAAA	-23	NA	77351704	77322497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ES.3188.3	chr10	-	2416	6	NNC	ENSMUSG00000032977.10	novel	2394	6	NA	NA	-31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.359366938253	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGCAGTCCCCTGGCT	NA	False	NA	-10	True	AATAAA	-23	NA	77351650	77322497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339743_77350139_77350249_77351436
ES.3188.4	chr10	-	2250	5	NIC	ENSMUSG00000032977.10	novel	2394	6	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	111.378577383624	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGCAGTCCCCTGGCT	NA	False	NA	-10	True	AATAAA	-23	NA	77351629	77322497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77324308_77325831_77325901_77339679_77339749_77350139_77350249_77351436
ES.3188.6	chr10	-	1738	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-18	674	-18	-674	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGACTCAAGTTCCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	77351637	77323168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ES.3188.7	chr10	-	966	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	-76	1504	-76	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTGGCTTTACTTC	NA	False	NA	-3	True	AATAAA	-35	NA	77351695	77323998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ES.3188.9	chr10	-	760	5	NIC	ENSMUSG00000032977.10	novel	2394	6	NA	NA	-32	11	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	111.378577383624	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTGAGGACCATCTGT	NA	False	NA	-14	True	AATAAA	-24	NA	77351651	77324009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77324308_77325831_77325901_77339679_77339749_77350139_77350249_77351436
ES.31880.1	chr7	+	1774	2	Intergenic	novelGene_26128	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTGAATTTGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	123451857	123453794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_123451923_123452085
ES.31880.2	chr7	+	1191	2	Intergenic	novelGene_26127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTCTGCTTGGTACT	NA	False	NA	NA	False	NA	NA	NA	123451857	123453211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_123451923_123452085
ES.31880.3	chr7	+	1252	1	Intergenic	novelGene_26129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGCTTTGGTCAGTAA	NA	False	NA	NA	False	GATAAA	-21	NA	123453558	123454810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_123453600_123454800
ES.31881.1	chr7	-	2196	2	ISM	ENSMUSG00000098129.2	ENSMUST00000181984.2	504	4	2685	6	2685	-6	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCCAAGAGTCTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	123579992	123570274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_123570463_123577984
ES.31882.1	chr7	-	2262	1	Intergenic	novelGene_26130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	124496668	124494406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_124494400_124496700
ES.31883.1	chr7	+	176	1	Intergenic	novelGene_26131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	124657998	124658174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_124658000_124658200
ES.31884.1	chr7	+	2461	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	-62	-10	-62	10	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTTTAACCAGACTCC	NA	False	NA	NA	False	AATAAA	-37	NA	125043785	125061451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ES.31884.2	chr7	+	4654	8	NNC	ENSMUSG00000030752.9	novel	2389	8	NA	NA	-24	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.9489027999587	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTTTAACCAGACTCC	NA	False	NA	NA	False	AATAAA	-37	NA	125043823	125061451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125043965_125051399_125052523_125052653_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ES.31884.4	chr7	+	1988	8	NNC	ENSMUSG00000030752.9	novel	2389	8	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.9489027999587	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	125043849	125061431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125043965_125051399_125051512_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ES.31884.5	chr7	+	1896	7	NIC	ENSMUSG00000030752.9	novel	2389	8	NA	NA	2	10	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	17.0953209972788	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTTTAACCAGACTCC	NA	False	NA	NA	False	AATAAA	-37	NA	125043849	125061451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125043965_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ES.31884.6	chr7	+	2429	8	NNC	ENSMUSG00000030752.9	novel	2389	8	NA	NA	41	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	16.6132477258361	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	125043896	125061431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125043965_125051399_125052000_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ES.31885.1	chr7	-	4614	10	NNC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-32	5413	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	430.533117694909	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAGTTACATATGGGG	NA	False	NA	NA	False	AATAAA	-24	NA	125090603	125061398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125061899_125062997_125063280_125063934_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ES.31885.10	chr7	-	3547	6	NIC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-40	-12	intron_retention	FALSE	canonical	3	553	junction_5	205.799902818247	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAATCCAGGGCTTGT	NA	False	NA	-23	True	AGTAAA	-21	NA	125090611	125066823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125067016_125067450_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ES.31885.2	chr7	-	6384	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	145	-5409	-52	5409	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTTAAGTTACATAT	NA	False	NA	NA	False	AATAAA	-20	NA	125090623	125061402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ES.31885.3	chr7	-	6462	8	NIC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-15	5407	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	366.164232139021	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATATTTAAGTTACAT	NA	False	NA	NA	False	AATAAA	-18	NA	125090586	125061404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090467
ES.31885.4	chr7	-	980	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	134	6	-63	-6	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	-17	True	AGTAAA	-27	NA	125090634	125066817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ES.31885.5	chr7	-	920	8	NNC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-42	-6	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	366.156039002444	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	-17	True	AGTAAA	-27	NA	125090613	125066817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125067016_125067450_125067572_125068200_125068318_125070323_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ES.31885.8	chr7	-	953	8	NNC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-53	-6	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_7	357.185597442574	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	False	NA	-17	True	AGTAAA	-27	NA	125090624	125066817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085640_125090584
ES.31885.9	chr7	-	809	7	NIC	ENSMUSG00000030750.14	novel	1120	8	NA	NA	-40	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	386.021048648905	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCAGGGCTTGTGTGAG	NA	False	NA	-18	True	AGTAAA	-26	NA	125090611	125066818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125090584
ES.31886.1	chr7	+	3638	11	NIC	ENSMUSG00000030748.10	novel	5256	11	NA	NA	-30	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	3.9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCCTTTACTATACACA	NA	False	NA	NA	False	AATAAA	-16	NA	125151412	125177140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125151501_125163723_125163909_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ES.31886.2	chr7	+	3599	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	148	1509	-3	-2	multi-exon	TRUE	canonical	0	0	junction_6	3.9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTTCCTTTACTATAC	NA	False	NA	NA	False	AATAAA	-13	NA	125151439	125177137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ES.31887.1	chr7	-	202	1	Intergenic	novelGene_26132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGATAGGAAGC	NA	False	NA	NA	False	AATAAA	-20	NA	125216631	125216429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125216400_125216600
ES.31888.1	chr7	+	2699	1	Antisense	novelGene_ENSMUSG00000032777.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGCATGCAAGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	125303317	125306016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125303300_125306000
ES.31889.1	chr7	-	6999	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	-37	-1	-37	1	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTATTGGCCTAATGA	NA	False	NA	2	True	ATTAAA	-17	NA	125306989	125240124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.10	chr7	-	3929	4	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	2570	-1	intron_retention	FALSE	canonical	3	240	junction_3	24.9577420631132	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGTGTATTGGCCTAAT	NA	False	NA	0	True	ATTAAA	-15	NA	125246579	125240126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125240906_125241618_125243545_125244686_125244977_125245645
ES.31889.13	chr7	-	10791	34	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	171	junction_31	18.9184126207289	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGTGTATTGGCCTAAT	NA	False	NA	0	True	ATTAAA	-15	NA	125306871	125240126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.14	chr7	-	7191	18	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	1633	-1	intron_retention	FALSE	canonical	3	195	junction_17	23.0390070912543	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGTGTATTGGCCTAAT	NA	False	NA	0	True	ATTAAA	-15	NA	125266531	125240126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483
ES.31889.17	chr7	-	7877	36	NNC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	18	-2	intron_retention	FALSE	canonical	0	0	junction_29	57.6913391441462	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTGTATTGGCCTAA	NA	False	NA	-1	True	ATTAAA	-14	NA	125306896	125240127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125286937_125286993_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.19	chr7	-	3465	5	ISM	ENSMUSG00000032777.10	ENSMUST00000205659.2	6570	36	60208	2	2508	-2	intron_retention	FALSE	canonical	3	227	junction_2	28.661821295933	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTGTATTGGCCTAA	NA	False	NA	-1	True	ATTAAA	-14	NA	125246641	125240127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686
ES.31889.2	chr7	-	6872	37	NNC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_33	44.1341512036783	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125306871	125240125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298128_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.21	chr7	-	6539	30	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-11447	-2	intron_retention	FALSE	canonical	3	195	junction_18	19.0159204843422	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTGTATTGGCCTAA	NA	False	NA	-1	True	ATTAAA	-14	NA	125280378	125240127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273
ES.31889.22	chr7	-	8400	23	NNC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	37	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	53.8537390216461	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTGTATTGGCCTAA	NA	False	NA	-1	True	ATTAAA	-14	NA	125268894	125240127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125254062_125254112_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754
ES.31889.27	chr7	-	7584	36	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	171	junction_33	23.9285671641787	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTGTGTATTGGCCTA	NA	False	NA	-2	True	ATTAAA	-13	NA	125306871	125240128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.30	chr7	-	6579	36	FSM	ENSMUSG00000032777.10	ENSMUST00000205659.2	6570	36	-13	4	-13	-4	multi-exon	FALSE	canonical	0	0	junction_6	44.7592197776284	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTTGTGTATTGGCCT	NA	False	NA	-3	True	ATTAAA	-12	NA	125306862	125240129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.35	chr7	-	3999	23	FSM	ENSMUSG00000032777.10	ENSMUST00000205697.2	4066	23	48	19	30	-19	multi-exon	FALSE	canonical	3	171	junction_20	17.5878550320413	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTTTCTTCTCTTGG	NA	False	NA	NA	False	NA	NA	NA	125306884	125261148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.36	chr7	-	1159	7	NNC	ENSMUSG00000032777.10	novel	712	6	NA	NA	28	3036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.9821160565841	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAACTTGGATGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	125306886	125287355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125287505_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ES.31889.37	chr7	-	1075	1	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-27	-13401	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGACAATACAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	125306876	125305801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125305800_125306900
ES.31889.5	chr7	-	5781	9	NIC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	1471	0	intron_retention	FALSE	canonical	3	227	junction_2	24.6776087779995	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125253592	125240125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125246800_125247568_125247742_125250234_125250329_125251034
ES.31889.9	chr7	-	6323	28	NNC	ENSMUSG00000032777.10	novel	6961	37	NA	NA	-6746	-1	intron_retention	TRUE	non_canonical	0	0	junction_11	49.571607874571	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGTGTATTGGCCTAAT	NA	False	NA	0	True	ATTAAA	-15	NA	125275677	125240126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125254062_125254112_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654
ES.3189.1	chr10	+	250	1	Intergenic	novelGene_2503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATCAGGCCAGTCA	NA	False	NA	NA	False	NA	NA	NA	77362115	77362365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77362100_77362400
ES.3189.2	chr10	+	291	2	Intergenic	novelGene_2504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATAGTGTTAGCAATC	NA	False	NA	NA	False	NA	NA	NA	77362118	77362491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77362366_77362447
ES.31890.1	chr7	+	6315	29	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	-53	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.08276253029822	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTACACTGGATGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	125307006	125473969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125308324_125308408_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.10	chr7	+	5736	28	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.87413793073789	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAGAGTGTGGTACAC	NA	False	NA	NA	False	AATAAA	-11	NA	125307092	125473960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442227_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465317_125465372_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.11	chr7	+	6208	29	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.24336382383204	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTGGTACACTGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	125307094	125473965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125327480_125327537_125331264_125331333_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.12	chr7	+	5970	26	NIC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	5.97407733461829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGTGTGGTACACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	125307095	125473963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.13	chr7	+	4730	1	FSM	ENSMUSG00000032743.16	ENSMUST00000205723.2	10079	1	1356	3993	1282	-3993	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125308444	125313174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125308400_125313200
ES.31890.14	chr7	+	5418	9	NIC	ENSMUSG00000032743.16	novel	4185	15	NA	NA	-7753	1	intron_retention	FALSE	canonical	0	0	junction_1	8.09320702811932	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGGTACACTGGATG	7428	False	NA	NA	False	AATAAA	-17	NA	125452100	125473966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125453811_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.2	chr7	+	4225	20	NIC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	5.38902136259798	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTCGAGCTTCAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	125307052	125461168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125460786
ES.31890.3	chr7	+	6165	28	FSM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	-15	-2	12	2	multi-exon	FALSE	canonical	3	6	junction_1	4.90904934097212	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGTACACTGGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	125307071	125473967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.5	chr7	+	3981	19	NIC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	-4	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_12	6.09188896083235	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTCGAGCTTCAGTGAGC	NA	False	NA	NA	False	AATAAA	-24	NA	125307082	125461170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125460786
ES.31890.6	chr7	+	6126	28	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.11638380839793	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGTGTGGTACACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	125307090	125473963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125346097_125346138_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.7	chr7	+	4130	19	NIC	ENSMUSG00000032743.16	novel	5874	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	5.63279638028292	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTCGAGCTTCAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	125307091	125461168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_125307121_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125460786
ES.31890.8	chr7	+	6164	28	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.86015512908139	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGGTACACTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	125307091	125473964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125327480_125327537_125339449_125339575_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ES.31890.9	chr7	+	6186	29	NNC	ENSMUSG00000032743.16	novel	6148	28	NA	NA	4	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_27	5.57874976850475	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAGAGTGTGGTACAC	NA	False	NA	NA	False	AATAAA	-11	NA	125307092	125473960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472311_125472361_125472618
ES.31891.1	chr7	+	210	1	Intergenic	novelGene_26133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATGATTGCGCATGT	NA	False	NA	NA	False	NA	NA	NA	125672642	125672852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125672600_125672900
ES.31892.1	chr7	+	159	1	Intergenic	novelGene_26134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAATTAATTAATAAATA	NA	False	NA	NA	False	NA	NA	NA	125698895	125699054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125698900_125699100
ES.31893.1	chr7	+	5772	1	Antisense	novelGene_ENSMUSG00000000131.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAAAATGGTGCTTAC	NA	False	NA	NA	False	NA	NA	NA	125705466	125711238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125705500_125711200
ES.31893.2	chr7	+	5620	2	Antisense	novelGene_ENSMUSG00000000131.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTTACAGCAGGCTAC	NA	False	NA	NA	False	NA	NA	NA	125705466	125711248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125707796_125707957
ES.31893.3	chr7	+	2857	7	Antisense	novelGene_ENSMUSG00000000131.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATATGGATTTTTACTC	NA	False	NA	NA	False	ATTAAA	-13	NA	125705466	125716116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125706411_125707628_125707796_125707957_125708073_125709085_125709244_125711924_125712113_125712827_125712974_125714977
ES.31893.4	chr7	+	3907	5	Antisense	novelGene_ENSMUSG00000000131.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	125707623	125716101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125707796_125707957_125708073_125709085_125709244_125711924_125712113_125712827
ES.31894.1	chr7	+	164	1	Intergenic	novelGene_26135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	125737692	125737856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125737700_125737900
ES.31894.11	chr7	+	4191	4	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.9344229426922	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAGCTGCAGGGTGG	NA	False	NA	19	True	AATAAA	-16	NA	125871727	125894188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872272_125889028_125889262_125890214_125890418_125890977
ES.31894.12	chr7	+	4144	4	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-61	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.6318879580173	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATTTAGAAAAA	NA	False	NA	-4	True	TTTAAA	-37	NA	125871729	125894165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872276_125889035_125889262_125890214_125890418_125890996
ES.31894.13	chr7	+	4293	5	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-54	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.2506361302562	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATTTAGAAAAA	NA	False	NA	-4	True	TTTAAA	-37	NA	125871736	125894165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872272_125873025_125873179_125889028_125889262_125890214_125890418_125890996
ES.31894.14	chr7	+	4736	3	ISM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-52	4	-52	-4	intron_retention	FALSE	canonical	3	196	junction_2	14.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTTTGAGCTGCAGG	NA	False	NA	15	True	AATAAA	-12	NA	125871738	125894184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_125872272_125889028_125889262_125890214
ES.31894.15	chr7	+	2250	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-42	1901	-42	295	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTATCTAGTGATACCCC	NA	False	NA	NA	False	TTTAAA	-31	NA	125871748	125892287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
ES.31894.17	chr7	+	4575	6	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.9395643100384	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTTGAGCTGCAGGG	NA	False	NA	16	True	AATAAA	-13	NA	125871775	125894185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872272_125874452_125874646_125874854_125875116_125889028_125889262_125890214_125890418_125890996
ES.31894.18	chr7	+	176	1	Intergenic	novelGene_26146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCGG	9353	False	NA	NA	False	NA	NA	NA	125882051	125882227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125882100_125882200
ES.31894.19	chr7	+	174	1	Intergenic	novelGene_26147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTAGCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	125886581	125886755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125886600_125886800
ES.31894.2	chr7	+	176	2	Antisense	novelGene_ENSMUSG00000108309.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	415	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	125737699	125897167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_125737824_125897115
ES.31894.20	chr7	+	190	1	Intergenic	novelGene_26149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	125896977	125897167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125897000_125897200
ES.31894.3	chr7	+	178	1	Intergenic	novelGene_26136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATTAA	6878	False	NA	NA	False	NA	NA	NA	125760611	125760789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125760600_125760800
ES.31894.4	chr7	+	172	1	Intergenic	novelGene_26137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGGAAAAG	8014	False	NA	NA	False	NA	NA	NA	125761747	125761919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125761700_125761900
ES.31894.5	chr7	+	175	1	Intergenic	novelGene_26138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	125791002	125791177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125791000_125791200
ES.31894.6	chr7	+	174	1	Intergenic	novelGene_26143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	125840283	125840457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125840300_125840500
ES.31894.7	chr7	+	4303	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	-183	-11	-183	11	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGTGGAAGGGGTACAC	NA	False	NA	30	True	AATAAA	-27	NA	125871607	125894199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
ES.31894.8	chr7	+	4468	5	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-166	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	97.0064430849828	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAGCTGCAGGGTGG	NA	False	NA	19	True	AATAAA	-16	NA	125871624	125894188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872272_125874452_125874646_125889028_125889262_125890214_125890418_125890996
ES.31894.9	chr7	+	4362	5	NNC	ENSMUSG00000042978.12	novel	4109	4	NA	NA	-75	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2609248362363	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTTGAGCTGCAGGG	NA	False	NA	16	True	AATAAA	-13	NA	125871715	125894185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_125872272_125874464_125874646_125889028_125889262_125890214_125890418_125890996
ES.31895.1	chr7	-	7665	2	NNC	ENSMUSG00000000131.16	novel	640	2	NA	NA	2191	6988	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5989	False	NA	NA	False	NA	NA	NA	125701789	125693898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125696219_125696444
ES.31895.10	chr7	-	4175	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	148.827710793387	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799601	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748638_125748710_125752370_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.12	chr7	-	8018	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	436	junction_20	39.6651271780337	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799677	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.14	chr7	-	4445	24	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	110.657170810553	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799614	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708028_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.16	chr7	-	4185	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	144.723293208876	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799648	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125752370_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.17	chr7	-	4518	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	149.758828111141	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799597	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125750395_125750441_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.18	chr7	-	4625	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	36	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	144.324768799014	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799637	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125702250_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.19	chr7	-	8063	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-7	-2	intron_retention	FALSE	canonical	1	6	junction_1	170.627879503582	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799601	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702098_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.2	chr7	-	5634	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-12	1649	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	150.088856783425	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGTATCCTTCCAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	125799606	125699237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125700043_125700538_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719618_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.20	chr7	-	4510	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	113.218877302744	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799605	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770344_125773329_125773421_125799070
ES.31895.21	chr7	-	4607	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.748343734738	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799597	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702228_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.24	chr7	-	9273	21	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	33	-2	intron_retention	FALSE	canonical	1	9	junction_10	119.993697751174	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799640	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125723543_125723704_125727398_125727469_125728719_125730307_125739736_125739847_125748405_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.26	chr7	-	4750	26	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	174.828080124447	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799615	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125780702_125780816_125784630_125784777_125799070
ES.31895.27	chr7	-	4784	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	150.156717900184	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799615	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125792518_125792812_125799070
ES.31895.29	chr7	-	4015	24	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-184	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	113.493135790036	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799284	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125703962_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.3	chr7	-	4817	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-36	805	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	113.109963726189	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCCTCTCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	125799136	125700081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704104_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.31	chr7	-	4425	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	152.131708433104	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799665	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125703962_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770344_125773329_125773421_125799070
ES.31895.32	chr7	-	4039	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_17	115.182975168186	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799617	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.33	chr7	-	4420	23	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	154.986782960877	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799592	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723718_125728709_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770313_125773329_125773421_125799070
ES.31895.37	chr7	-	4682	28	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	204.071761766829	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799621	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125750395_125750441_125751264_125751343_125751877_125751906_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.39	chr7	-	4442	23	NIC	ENSMUSG00000000131.16	novel	4455	24	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_18	147.17889828088	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799647	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.40	chr7	-	4628	25	NNC	ENSMUSG00000000131.16	novel	4455	24	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	172.320840939865	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799657	125700891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125789711_125789812_125799070
ES.31895.42	chr7	-	4674	26	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	221.325447249068	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGTGATGGGGCATC	NA	False	NA	NA	False	AATAAA	-23	NA	125799615	125700891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702229_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125748405_125748533_125748675_125748710_125750395_125750524_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.43	chr7	-	7768	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_17	113.80557492798	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799598	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125751710_125751877_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.44	chr7	-	4167	24	NNC	ENSMUSG00000000131.16	novel	4455	24	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.358484191762	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799623	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702250_125702363_125703875_125704107_125704272_125704388_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.46	chr7	-	4589	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	144.586743475634	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799682	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.47	chr7	-	4539	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	149.477144295262	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799641	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125772914_125772940_125773329_125773421_125799070
ES.31895.49	chr7	-	4361	23	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	115.464253349913	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799640	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768460_125773329_125773421_125799070
ES.31895.5	chr7	-	4994	22	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-27	805	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	118.179232802382	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTCCTCTCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	125799621	125700081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125773329_125773421_125799070
ES.31895.50	chr7	-	4427	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	111.57244158941	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799613	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768336_125768394_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.51	chr7	-	4633	26	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_19	187.854837574123	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799614	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125702250_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.52	chr7	-	4373	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_21	115.066895742728	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799613	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125773329_125773421_125799070
ES.31895.54	chr7	-	4371	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	116.294555133587	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799658	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.57	chr7	-	7921	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	171.293480895282	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799593	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702229_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.58	chr7	-	4481	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	113.533170123698	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799615	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723697_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.6	chr7	-	4572	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	-19	-1	-19	1	multi-exon	FALSE	canonical	3	436	junction_21	38.8223134638356	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGGGGCATCTTTGTA	NA	False	NA	NA	False	AATAAA	-29	NA	125799692	125700885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.60	chr7	-	10571	21	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	436	junction_18	39.8754310321531	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799597	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125730307_125739736_125739847_125748405_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.63	chr7	-	5481	16	NIC	ENSMUSG00000000131.16	novel	5028	21	NA	NA	2317	0	intron_retention	FALSE	canonical	3	31	junction_15	131.499894381031	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125749890	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675
ES.31895.64	chr7	-	4745	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	149.611017633135	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAGTGATGGGGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	125799614	125700892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125772914_125773173_125773329_125773421_125799070
ES.31895.65	chr7	-	5291	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-20	-1	intron_retention	FALSE	canonical	0	0	junction_18	149.785189603561	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACTAGTGATGGGGCA	NA	False	NA	NA	False	AATAAA	-21	NA	125799614	125700893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755890_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.67	chr7	-	4232	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	172.658140072611	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACTAGTGATGGGGCA	NA	False	NA	NA	False	AATAAA	-21	NA	125799621	125700893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125702250_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125752370_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.68	chr7	-	4491	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	172.079676111258	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799602	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711939_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.69	chr7	-	6035	24	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_17	150.016218404875	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799607	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708028_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125750395_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.7	chr7	-	7949	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_22	174.217058100903	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799660	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125770451_125770543_125773329_125773421_125799070
ES.31895.71	chr7	-	4490	25	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	150.149624449155	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799568	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125763861_125763913_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.72	chr7	-	6111	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-10	-2	intron_retention	FALSE	canonical	2	5	junction_18	145.133822346443	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799604	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125750395_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.73	chr7	-	5860	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	436	junction_20	38.1089130807787	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799604	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.74	chr7	-	4546	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	112.406213795372	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACTAGTGATGGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	125799681	125700894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712108_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.76	chr7	-	8404	22	NIC	ENSMUSG00000000131.16	novel	4455	24	NA	NA	11	-3	intron_retention	FALSE	canonical	3	58	junction_12	106.065397188365	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACACTAGTGATGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	125799662	125700895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.77	chr7	-	4468	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	113.803648102163	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACACTAGTGATGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	125799604	125700895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728807_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.78	chr7	-	4565	17	NIC	ENSMUSG00000000131.16	novel	5028	21	NA	NA	3059	-5	intron_retention	FALSE	canonical	3	31	junction_16	167.256434386693	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAACACTAGTGATGG	NA	False	NA	NA	False	AATAAA	-17	NA	125749148	125700897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125748675
ES.31895.79	chr7	-	4759	24	NNC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-8	-5	intron_retention	FALSE	canonical	0	0	junction_22	153.112039978538	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAACACTAGTGATGG	NA	False	NA	NA	False	AATAAA	-17	NA	125799602	125700897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125701563_125703875_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125784653_125784777_125799070
ES.31895.8	chr7	-	3396	18	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-20	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	130.893416584603	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799614	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125799070
ES.31895.82	chr7	-	5767	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	11	5	intron_retention	FALSE	canonical	2	2	junction_2	115.880718452601	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATATAAACACTAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	125799662	125700900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125703962_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.83	chr7	-	3851	15	ISM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	66	12780	-13	-1596	5prime_fragment	FALSE	canonical	3	436	junction_12	31.6621192581666	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTAGTGTGGTGGTTGT	NA	False	NA	NA	False	CATAAA	-19	NA	125799607	125713666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.84	chr7	-	2751	3	ISM	ENSMUSG00000000131.16	ENSMUST00000170675.8	5028	21	32048	16735	11839	15	internal_fragment	FALSE	canonical	3	494	junction_1	28	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAACAAAACTT	NA	False	NA	NA	False	NA	NA	NA	125727995	125717627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125719622_125723543_125723704_125727398
ES.31895.85	chr7	-	2514	8	NIC	ENSMUSG00000000131.16	novel	2085	9	NA	NA	-21	392	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	175.112558553821	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACCAACTGTGTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	125799615	125750467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125751343_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31895.86	chr7	-	178	1	Intergenic	novelGene_26139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	733	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	125791367	125791189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125791200_125791400
ES.31895.9	chr7	-	7813	24	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	31	junction_17	107.883855492805	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTGATGGGGCATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	125799615	125700889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ES.31896.1	chr7	-	1650	4	NNC	ENSMUSG00000108676.2	novel	1805	5	NA	NA	9880	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCGAGTCATATAGCTG	NA	False	NA	NA	False	NA	NA	NA	125837530	125823418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125824856_125826341_125826410_125829263_125829329_125837450
ES.31896.2	chr7	-	202	1	Intergenic	novelGene_26140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGAAGCATGGCTCTC	NA	False	NA	NA	False	NA	NA	NA	125829578	125829376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125829400_125829600
ES.31897.1	chr7	-	171	1	Intergenic	novelGene_26141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	125839212	125839041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125839000_125839200
ES.31898.1	chr7	-	176	1	Intergenic	novelGene_26142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAACAAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	125839402	125839226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125839200_125839400
ES.31899.1	chr7	-	176	1	Intergenic	novelGene_26144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	125853991	125853815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125853800_125854000
ES.319.1	chr1	-	4640	16	NNC	ENSMUSG00000060771.16	novel	3400	20	NA	NA	3	20106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.0264328874855	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATTTCTTACGACTATA	NA	False	NA	NA	False	NA	NA	NA	37904151	37820437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37823108_37840800_37840987_37843709_37843821_37846017_37846187_37850052_37850109_37854612_37854768_37858605_37858722_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880424_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.10	chr1	-	3656	8	FSM	ENSMUSG00000060771.16	ENSMUST00000123082.9	3953	8	3	294	3	-294	multi-exon	FALSE	canonical	2	7	junction_7	8.03309481114831	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTGTGTGGACATAT	NA	False	NA	-1	True	NA	NA	NA	37903914	37871777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37903806
ES.319.11	chr1	-	3466	7	NIC	ENSMUSG00000060771.16	novel	2861	8	NA	NA	0	-298	intron_retention	FALSE	canonical	0	0	junction_6	9.59166304662544	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTCTTTGTGTGGAC	NA	False	NA	-5	True	NA	NA	NA	37904154	37871781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37904103
ES.319.12	chr1	-	3381	7	NIC	ENSMUSG00000060771.16	novel	3953	8	NA	NA	14	-298	intron_retention	FALSE	canonical	0	0	junction_5	8.27479439153761	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTCTTTGTGTGGAC	NA	False	NA	-5	True	NA	NA	NA	37903903	37871781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37894325_37894455_37903806
ES.319.13	chr1	-	3679	7	NIC	ENSMUSG00000060771.16	novel	2861	8	NA	NA	1	-299	intron_retention	FALSE	canonical	2	9	junction_3	6.93821943216622	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTTGTGTGGA	NA	False	NA	-6	True	NA	NA	NA	37904153	37871782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.14	chr1	-	3388	8	NNC	ENSMUSG00000060771.16	novel	1981	8	NA	NA	18	-299	intron_retention	FALSE	canonical	0	0	junction_5	9.102589898328	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAAGTCTTTGTGTGGA	NA	False	NA	-6	True	NA	NA	NA	37904136	37871782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888455_37888528_37894325_37894455_37904103
ES.319.16	chr1	-	3581	8	NIC	ENSMUSG00000060771.16	novel	3837	18	NA	NA	-65	-300	intron_retention	FALSE	canonical	0	0	junction_7	9.67850553483104	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAAGTCTTTGTGTGG	NA	False	NA	-7	True	NA	NA	NA	37904225	37871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904186
ES.319.17	chr1	-	1621	6	NNC	ENSMUSG00000060771.16	novel	3953	8	NA	NA	-5707	-208	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	8.82269800004511	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCAGGTCTACCCAAGT	1865	False	NA	NA	False	TATAAA	-11	NA	37888509	37873559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37874417_37874500_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311
ES.319.2	chr1	-	3875	16	ISM	ENSMUSG00000060771.16	ENSMUST00000041815.15	3400	20	-47	27412	-47	19275	5prime_fragment	FALSE	canonical	0	0	junction_6	10.7322980867204	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTTTCTGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	37904207	37821268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_37823108_37840800_37840987_37843709_37843821_37846017_37846187_37850052_37850109_37854612_37854768_37858605_37858722_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.3	chr1	-	2197	15	NIC	ENSMUSG00000060771.16	novel	3400	20	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	10.8806137281884	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTATAAGAACATTAGCAT	NA	False	NA	NA	False	AATAAA	-22	NA	37904154	37840542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37840987_37843709_37843821_37846017_37846187_37850052_37850109_37854612_37854768_37858605_37858722_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.4	chr1	-	3861	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	29	-1029	29	-3	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTACAGTATAATTTT	NA	False	NA	NA	False	TATAAA	-45	NA	37904125	37871486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.5	chr1	-	3735	8	NIC	ENSMUSG00000060771.16	novel	3953	8	NA	NA	-3	-177	intron_retention	FALSE	canonical	2	6	junction_4	8.59283042389861	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTGCATTTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	37903920	37871660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37903806
ES.319.6	chr1	-	3660	8	FSM	ENSMUSG00000060771.16	ENSMUST00000193669.2	1981	8	9	-1688	9	-180	multi-exon	FALSE	canonical	2	6	junction_4	7.29830844253989	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTACTGTGCATTTCTC	NA	False	NA	NA	False	NA	NA	NA	37904145	37871663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.7	chr1	-	3715	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-6	-848	0	-184	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTAGTACTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	37904160	37871667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.8	chr1	-	3660	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	-59	-740	-53	-292	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTGTGGACATATGT	NA	False	NA	1	True	NA	NA	NA	37904213	37871775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.319.9	chr1	-	3616	8	FSM	ENSMUSG00000060771.16	ENSMUST00000193669.2	1981	8	-59	-1576	-53	-292	multi-exon	FALSE	canonical	2	6	junction_4	7.29830844253989	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTGTGGACATATGT	NA	False	NA	1	True	NA	NA	NA	37904213	37871775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ES.3190.1	chr10	-	175	1	Intergenic	novelGene_2505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCAGAGTGAGCGGGGC	NA	False	NA	NA	False	NA	NA	NA	77374836	77374661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77374700_77374800
ES.31900.1	chr7	-	146	1	Intergenic	novelGene_26145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	125854995	125854849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125854800_125855000
ES.31901.1	chr7	-	2396	1	Intergenic	novelGene_26148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	125897328	125894932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125894900_125897300
ES.31902.1	chr7	-	189	1	Intergenic	novelGene_26150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTTTATAAAA	NA	False	NA	NA	False	NA	NA	NA	125915556	125915367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125915400_125915600
ES.31903.1	chr7	+	165	1	Intergenic	novelGene_26151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGTGACTGG	NA	False	NA	NA	False	NA	NA	NA	125920960	125921125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125921000_125921100
ES.31903.2	chr7	+	339	1	Intergenic	novelGene_26152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTGTTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	125920960	125921299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125921000_125921300
ES.31904.1	chr7	+	177	1	Intergenic	novelGene_26153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	125948378	125948555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125948400_125948600
ES.31905.1	chr7	+	179	1	Intergenic	novelGene_26154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATCAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	125951936	125952115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125951900_125952100
ES.31906.1	chr7	-	1108	13	NNC	ENSMUSG00000030742.8	novel	1235	12	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	14.9673255237311	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGTCGTTGTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	125968728	125963001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967713_125967973_125968009_125968113_125968142_125968319_125968577_125968680
ES.31906.2	chr7	-	1280	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	-48	3	-12	-3	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGTCGTTGTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	125968754	125963001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
ES.31906.4	chr7	-	2037	6	ISM	ENSMUSG00000030742.8	ENSMUST00000206793.2	1215	11	-3	6	-3	-3	intron_retention	FALSE	canonical	3	39	junction_1	5.2687759489278	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCGTCGTTGTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	125968716	125963001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217
ES.31906.5	chr7	-	1225	11	FSM	ENSMUSG00000030742.8	ENSMUST00000206793.2	1215	11	-18	8	11	-5	multi-exon	FALSE	canonical	1	1	junction_6	13.9071923837991	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTCGTCGTTGTCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	125968731	125963003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
ES.31906.6	chr7	-	1359	11	NIC	ENSMUSG00000030742.8	novel	1235	12	NA	NA	10	-7	intron_retention	FALSE	canonical	3	34	junction_9	5.53534100123922	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAAGTCGTCGTTGTCT	NA	False	NA	NA	False	AATAAA	-10	NA	125968732	125963005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968142_125968319
ES.31907.1	chr7	-	2514	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	-296	1	-296	-1	multi-exon	FALSE	canonical	3	348	junction_9	48.6508899292612	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGTCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	125976918	125969232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.10	chr7	-	7262	2	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	454	junction_1	0	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976597	125969238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125975912_125976008
ES.31907.11	chr7	-	3178	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	376	junction_6	42.5305772356783	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.12	chr7	-	3618	9	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	376	junction_5	46.9838735631706	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976600	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125971740_125971916_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.13	chr7	-	2268	13	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_9	168.693735476125	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976600	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125973372_125973452_125974238_125974376_125975845_125975912_125976008
ES.31907.14	chr7	-	4518	8	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	376	junction_5	47.5046721654936	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976621	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125971740_125971916_125974376_125975845_125975912_125976008
ES.31907.15	chr7	-	3005	8	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	348	junction_6	54.6099340592825	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125975912	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125973009_125973093_125973246_125974238_125974376_125975845
ES.31907.16	chr7	-	3392	10	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-80	-1	intron_retention	FALSE	canonical	3	376	junction_5	44.8032736899139	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976459	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.17	chr7	-	4346	7	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	6	-1	intron_retention	FALSE	canonical	1	2	junction_4	172.059824867205	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976616	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125973009_125973093_125973452_125974238_125974376_125975845_125975912_125976008
ES.31907.18	chr7	-	3065	9	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-565	-1	intron_retention	FALSE	canonical	3	13	junction_6	151.542073365782	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125977187	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
ES.31907.19	chr7	-	2140	12	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	20	-1	intron_retention	FALSE	canonical	0	0	junction_11	132.920407427693	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976563	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975900_125976008
ES.31907.2	chr7	-	2268	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	-1	intron_retention	TRUE	canonical	2	18	junction_8	134.288532645196	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGTCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	125976595	125969232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125972063_125972941_125973009_125973093_125973146_125974238_125974376_125975845_125975912_125976008
ES.31907.20	chr7	-	4928	6	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	446	junction_4	26.2648053486029	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976590	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125974376_125975845_125975912_125976008
ES.31907.21	chr7	-	4674	7	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	390	junction_4	39.9068359501922	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976600	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125974376_125975845_125975912_125976008
ES.31907.23	chr7	-	2356	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	3	-1	intron_retention	FALSE	canonical	3	348	junction_8	47.394197957134	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976590	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.24	chr7	-	2304	13	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_4	166.730550256661	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976621	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125970913_125971008_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.25	chr7	-	4617	7	NNC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	178.859970057274	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976590	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971273_125971583_125974376_125975845_125975912_125976008
ES.31907.26	chr7	-	2479	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	2	junction_8	139.006654516969	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976599	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973452_125974238_125974376_125975845_125975912_125976008
ES.31907.27	chr7	-	3731	9	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	390	junction_4	40.7934967243555	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976621	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.28	chr7	-	4752	7	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	376	junction_4	44.518722653134	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976591	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125971320_125971583_125971740_125971916_125974376_125975845_125975912_125976008
ES.31907.29	chr7	-	5526	4	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-31	-1	intron_retention	FALSE	canonical	3	446	junction_2	27.0678160675491	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976653	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125974376_125975845_125975912_125976008
ES.31907.3	chr7	-	2165	12	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	3	-2	intron_retention	FALSE	canonical	2	2	junction_4	132.701491892191	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGACTGCTTGTCTCTCT	NA	False	NA	-1	True	AATAAA	-19	NA	125976590	125969233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971149_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.30	chr7	-	6759	3	ISM	ENSMUSG00000030741.16	ENSMUST00000126810.8	3251	10	-7	1	3	-1	intron_retention	FALSE	canonical	3	464	junction_2	21.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976590	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125969586_125969906_125970079_125970349
ES.31907.31	chr7	-	3268	10	FSM	ENSMUSG00000030741.16	ENSMUST00000126810.8	3251	10	-18	1	-8	-1	multi-exon	FALSE	canonical	3	376	junction_6	44.3045019031801	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976601	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.32	chr7	-	2264	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	3	-1	intron_retention	FALSE	canonical	3	348	junction_8	50.8948916886557	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976590	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.33	chr7	-	4059	11	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	79	-1	intron_retention	FALSE	canonical	1	1	junction_4	182.073062257985	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976504	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125970913_125971008_125971129_125971320_125971583_125971740_125971916_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.34	chr7	-	2114	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	2	-1	intron_retention	FALSE	canonical	1	2	junction_3	133.910268463625	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976591	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.35	chr7	-	2017	13	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	2	18	junction_9	161.274352166321	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976600	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973146_125974238_125974376_125975845_125975912_125976008_125976218_125976289
ES.31907.36	chr7	-	5193	5	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	446	junction_3	23.5411873107539	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976591	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125974376_125975845_125975912_125976008
ES.31907.37	chr7	-	1963	11	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	37	-1	intron_retention	FALSE	canonical	2	2	junction_4	179.359861730544	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976546	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971149_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
ES.31907.38	chr7	-	3319	10	NNC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-50	-1	intron_retention	FALSE	canonical	2	2	junction_4	145.612117932845	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976672	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971149_125971320_125971583_125971740_125971916_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.39	chr7	-	3959	8	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	403	junction_4	36.4842711427312	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGACTGACTGCTTGT	NA	False	NA	-7	True	AATAAA	-13	NA	125976585	125969239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.4	chr7	-	2028	12	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	38	-3	intron_retention	FALSE	canonical	1	1	junction_4	174.072227813249	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACTGCTTGTCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	125976163	125969234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125970913_125971008_125971129_125971320_125971583_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ES.31907.40	chr7	-	2198	14	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	183.393811075588	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976588	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125970913_125971008_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
ES.31907.41	chr7	-	4081	10	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	376	junction_6	42.7415430953638	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976621	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.42	chr7	-	5981	8	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	25	junction_7	156.288064751194	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976595	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125973009_125973093_125975912_125976008_125976218_125976289
ES.31907.43	chr7	-	3766	8	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-37	-2	intron_retention	FALSE	canonical	3	403	junction_5	34.0252007446582	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976659	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.44	chr7	-	3803	9	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	376	junction_4	40.5670740872447	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976607	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.45	chr7	-	6546	3	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	454	junction_2	26.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGACTGACTGCTTG	NA	False	NA	-8	True	AATAAA	-12	NA	125976204	125969240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125975912_125976008
ES.31907.46	chr7	-	4321	6	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	403	junction_3	33.3790353365702	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976600	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.47	chr7	-	4227	9	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	390	junction_5	37.0202647208255	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976591	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125973009_125973093_125974376_125975845_125975912_125976008
ES.31907.48	chr7	-	2115	13	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	122.006830409886	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976600	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
ES.31907.49	chr7	-	5430	7	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	403	junction_4	39.0757810755801	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976588	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125972063_125972941_125973009_125973093_125975912_125976008
ES.31907.5	chr7	-	2435	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	3	-3	intron_retention	FALSE	canonical	2	18	junction_8	133.829032724592	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACTGCTTGTCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	125976590	125969234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973146_125974238_125974376_125975845_125975912_125976008
ES.31907.50	chr7	-	3814	8	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	390	junction_4	42.2103575643975	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976621	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125971320_125971583_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.51	chr7	-	4606	7	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	446	junction_4	26.3923389557568	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976621	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125974376_125975845_125975912_125976008
ES.31907.53	chr7	-	2022	11	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_7	181.335628049206	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976597	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972053_125972941_125973009_125974238_125974376_125975845_125975912_125976008
ES.31907.54	chr7	-	3870	8	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	376	junction_4	43.1499521129159	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCTGACTGACTGCTT	NA	False	NA	-9	True	AATAAA	-11	NA	125976590	125969241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125971320_125971583_125971740_125971916_125972063_125972941_125974376_125975845_125975912_125976008
ES.31907.55	chr7	-	2158	11	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-5	-5	intron_retention	FALSE	canonical	2	18	junction_8	134.439168399689	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTCCTGACTGACTGC	NA	False	NA	-11	True	AATAAA	-9	NA	125976588	125969243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973146_125974238_125974376_125975845_125975912_125976008
ES.31907.56	chr7	-	3091	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_8	139.578687484874	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTCCTGACTGACTGC	NA	False	NA	-11	True	AATAAA	-9	NA	125976582	125969243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125974085_125974238_125974376_125975845_125975912_125976008
ES.31907.6	chr7	-	5784	3	NIC	ENSMUSG00000030741.16	novel	867	7	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	446	junction_1	4	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACTGCTTGTCTCTC	NA	False	NA	-2	True	AATAAA	-18	NA	125976585	125969234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125974376_125975845_125975912_125976008
ES.31907.7	chr7	-	4931	6	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	3	2	intron_retention	FALSE	canonical	3	390	junction_3	37.5574227017776	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGACTGCTTGTCTC	NA	False	NA	-4	True	AATAAA	-16	NA	125976590	125969236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125971320_125971583_125974376_125975845_125975912_125976008
ES.31907.8	chr7	-	4147	9	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	376	junction_6	44.4487063928749	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976600	125969238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125974376_125975845_125975912_125976008
ES.31907.9	chr7	-	3355	10	NIC	ENSMUSG00000030741.16	novel	2152	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	390	junction_5	38.4730144322767	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976595	125969238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
ES.31908.1	chr7	+	731	1	Intergenic	novelGene_26155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCACCATGGTCATGAAG	NA	False	NA	NA	False	NA	NA	NA	125987287	125988018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125987300_125988000
ES.31909.1	chr7	+	173	1	Intergenic	novelGene_26157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAACCACATGA	NA	False	NA	NA	False	NA	NA	NA	125993271	125993444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_125993300_125993400
ES.3191.1	chr10	+	1843	9	ISM	ENSMUSG00000000290.14	ENSMUST00000000299.14	2970	16	20729	11	20601	-11	3prime_fragment	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAGGTAAGCTTTGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	77386814	77401509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395558_77395983_77396207_77396846_77397050_77400471_77400639_77401011
ES.31910.1	chr7	-	2343	1	Genic_Genomic	ENSMUSG00000030722.8	novel	NA	NA	NA	NA	5712	351	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACAGACTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	125984017	125981674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_125981700_125984000
ES.31910.10	chr7	-	2638	4	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	2248	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.572772216882	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125987481	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125987384
ES.31910.11	chr7	-	3998	6	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	0	intron_retention	FALSE	canonical	3	18	junction_5	97.1403108909993	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995892	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125990567_125995113_125995187_125995517
ES.31910.12	chr7	-	3126	6	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	115.724846078964	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995892	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995517
ES.31910.13	chr7	-	3476	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	215	junction_6	20.4260182664714	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995897	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.14	chr7	-	3384	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.6543685675266	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995895	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986694_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.16	chr7	-	3446	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	89.1890905747503	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGCTGGTTTCTGTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	125995892	125982026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990366_125990567_125995113_125995187_125995527
ES.31910.17	chr7	-	4750	2	ISM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	6870	2	690	-2	intron_retention	FALSE	canonical	3	268	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGCTGGTTTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	125989039	125982027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125984312_125986573
ES.31910.18	chr7	-	3478	7	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	18	-2	intron_retention	FALSE	canonical	3	18	junction_6	86.9394744763403	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGCTGGTTTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	125995891	125982027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995517
ES.31910.19	chr7	-	3468	7	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-3	intron_retention	FALSE	canonical	3	18	junction_6	88.9769008725798	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGCTGGTTTCTGTC	NA	False	NA	-9	True	AATAAA	-17	NA	125995892	125982028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989916_125990442_125990567_125995113_125995187_125995517
ES.31910.2	chr7	-	3450	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	-60	-2	-60	2	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGTTTCTGTCTTTGT	NA	False	NA	-4	True	AATAAA	-22	NA	125995969	125982023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.20	chr7	-	3083	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	239	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	88.5949277582515	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCACTTGCTGGTTTCTGT	NA	False	NA	-10	True	AATAAA	-16	NA	125995670	125982029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986867_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.22	chr7	-	3203	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	-2	187	-2	-187	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAACTCCCTTTTTTTG	NA	False	NA	0	True	AATAAA	-29	NA	125995911	125982212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.24	chr7	-	3007	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-193	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_7	83.1983123847682	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATGCCAACTCCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	125995892	125982218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995698
ES.31910.26	chr7	-	2959	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-193	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	86.2826394910994	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATGCCAACTCCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	125995892	125982218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995746
ES.31910.27	chr7	-	4139	5	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	22	-195	intron_retention	FALSE	canonical	3	225	junction_2	17.6422787643774	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGTATGCCAACTCCC	NA	False	NA	-8	True	AATAAA	-21	NA	125995887	125982220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125990567_125995113
ES.31910.28	chr7	-	4553	1	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	2953	-198	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAAAAGTATGCCAACT	NA	False	NA	-11	True	AATAAA	-18	NA	125986776	125982223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125982200_125986800
ES.31910.29	chr7	-	3268	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	-203	intron_retention	FALSE	canonical	3	215	junction_6	20.4260182664714	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCACAAAAGTATGC	NA	False	NA	-16	True	AATAAA	-13	NA	125995892	125982228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.3	chr7	-	3402	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	83.1983123847682	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995912	125982024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995517
ES.31910.30	chr7	-	1368	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	-2	2022	-2	1	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTTACTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	125995911	125984047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.31	chr7	-	171	1	Intergenic	novelGene_26156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAGAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	125992946	125992775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_125992800_125992900
ES.31910.32	chr7	-	1978	2	ISM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	11	11554	11	-9531	5prime_fragment	FALSE	canonical	3	215	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	125995898	125993579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_125995187_125995527
ES.31910.4	chr7	-	3217	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_7	83.1983123847682	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995908	125982024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995698
ES.31910.5	chr7	-	3465	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	14	1	intron_retention	FALSE	canonical	3	215	junction_6	22.8892259953601	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995895	125982024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989916_125990442_125990567_125995113_125995187_125995527
ES.31910.6	chr7	-	3172	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	86.2826394910994	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995911	125982024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995746
ES.31910.7	chr7	-	3262	7	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.7539628792061	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTTTCTGTCTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	125995912	125982024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990510_125995527
ES.31910.8	chr7	-	3365	8	NNC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	85.8311108621853	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995892	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990561_125995113_125995187_125995527
ES.31910.9	chr7	-	3175	6	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	94.5101052798059	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995951	125982025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_125984312_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ES.31911.1	chr7	-	114	1	Intergenic	novelGene_26158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	126019902	126019788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126019800_126019900
ES.31912.1	chr7	+	176	1	Intergenic	novelGene_26159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	126021683	126021859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126021700_126021900
ES.31913.1	chr7	-	168	1	Intergenic	novelGene_26160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	126022989	126022821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126022800_126023000
ES.31914.1	chr7	+	3592	11	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	-879	-2	intron_retention	FALSE	canonical	3	165	junction_7	15.0880747612146	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGTTGCCTTGTGCCT	NA	False	NA	10	True	AATAAA	-13	NA	126027051	126045071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043751_126043991_126044109_126044468
ES.31914.10	chr7	+	2215	12	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	55.1880331980083	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGTGCCTGCAAG	NA	False	NA	15	True	AATAAA	-18	NA	126028247	126045076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ES.31914.11	chr7	+	2551	10	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	11	3	intron_retention	FALSE	non_canonical	0	0	junction_8	60.8351344228556	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGTGCCTGCAAG	NA	False	NA	15	True	AATAAA	-18	NA	126028248	126045076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039619_126041008_126041165_126043301_126043490_126043694_126044109_126044468
ES.31914.12	chr7	+	5275	8	NIC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	16	4	intron_retention	FALSE	canonical	3	165	junction_5	16.4639370895845	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGTGCCTGCAAGC	NA	False	NA	16	True	AATAAA	-19	NA	126028253	126045077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126028329_126028747_126028958_126034831_126038079_126039337_126039619_126041008_126041165_126043301_126043480_126043589_126044109_126044468
ES.31914.13	chr7	+	4862	11	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	16	-1	intron_retention	FALSE	canonical	3	161	junction_3	16.5481116747501	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028253	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126028329_126028747_126028958_126034831_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043751_126043991_126044109_126044468
ES.31914.14	chr7	+	4471	4	NIC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	-11	2371	intron_retention	FALSE	canonical	3	185	junction_2	9.56846672960488	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGCTGCCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	126028259	126040282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126028329_126028747_126028958_126034831_126038079_126039337
ES.31914.15	chr7	+	2562	11	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_7	76.5373111625957	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028262	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037709_126038079_126039337_126039434_126039519_126039619_126041012_126041165_126043301_126043480_126043589_126044109_126044468
ES.31914.16	chr7	+	2892	10	ISM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	35	1	2	-1	intron_retention	FALSE	canonical	3	161	junction_4	13.2413493773608	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028272	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589
ES.31914.17	chr7	+	2211	11	NNC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.5949047149325	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028588	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028870_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043991_126044109_126044468
ES.31914.18	chr7	+	2292	11	NNC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	56.3479369631223	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028594	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043685_126043751_126043991_126044109_126044468
ES.31914.19	chr7	+	3417	9	NNC	ENSMUSG00000030727.13	novel	2279	12	NA	NA	-1284	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.815314163386	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGTGCCTGCAAGCC	NA	False	NA	17	True	AATAAA	-20	NA	126036063	126045078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043830_126044109_126044468
ES.31914.2	chr7	+	2573	12	NNC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	-27	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.1880331980083	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGCCTGCAAGCCCC	NA	False	NA	19	True	AATAAA	-22	NA	126027903	126045080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043991_126044109_126044468
ES.31914.21	chr7	+	3502	1	Genic_Genomic	ENSMUSG00000030727.13	novel	NA	NA	NA	NA	969	25	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGACTGACTGACTGA	NA	False	NA	NA	False	NA	NA	NA	126044940	126048442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_126044900_126048400
ES.31914.22	chr7	+	3159	2	NNC	ENSMUSG00000030727.13	novel	2338	3	NA	NA	1140	25	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGACTGACTGACTGA	NA	False	NA	NA	False	NA	NA	NA	126045111	126048442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126046862_126047033
ES.31914.3	chr7	+	2294	11	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	-101	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	57.8782342508823	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028136	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043963_126044109_126044468
ES.31914.4	chr7	+	2237	12	NNC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.1880331980083	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCAGTTGCCTTGTGCC	NA	False	NA	9	True	AATAAA	-12	NA	126028228	126045070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043685_126043751_126043991_126044109_126044468
ES.31914.5	chr7	+	1200	2	ISM	ENSMUSG00000030727.13	ENSMUST00000141764.2	742	3	-42	5458	-9	-5458	5prime_fragment	FALSE	canonical	3	207	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATACCTTATTGGAAA	NA	False	NA	NA	False	NA	NA	NA	126028228	126029847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126028329_126028747
ES.31914.6	chr7	+	4783	11	NNC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	57.2890914572748	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGTTGCCTTGTGCCTG	NA	False	NA	11	True	AATAAA	-14	NA	126028237	126045072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043490_126043694_126043751_126043991_126044109_126044468
ES.31914.7	chr7	+	2186	11	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	1	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.8782342508823	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCCTGCAAGCCCCGT	NA	False	NA	21	True	AATAAA	-24	NA	126028238	126045082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043979_126044109_126044468
ES.31914.8	chr7	+	2403	3	FSM	ENSMUSG00000030727.13	ENSMUST00000141764.2	742	3	-27	-1634	6	-640	multi-exon	FALSE	canonical	3	185	junction_2	11	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTAGGCTTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	126028243	126036939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126028329_126028747_126028958_126034831
ES.31914.9	chr7	+	2543	10	NNC	ENSMUSG00000030727.13	novel	2782	12	NA	NA	10	3	intron_retention	FALSE	non_canonical	0	0	junction_6	80.3304901909666	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGTGCCTGCAAG	NA	False	NA	15	True	AATAAA	-18	NA	126028247	126045076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126038079_126039337_126039434_126039519_126039619_126041012_126041165_126043301_126043490_126043694_126044109_126044468
ES.31915.1	chr7	-	158	1	Intergenic	novelGene_26161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	126038997	126038839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126038800_126039000
ES.31916.1	chr7	+	229	1	Intergenic	novelGene_26162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	126076351	126076580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126076400_126076600
ES.31917.1	chr7	+	216	1	Intergenic	novelGene_26163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTTTAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	126082901	126083117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126082900_126083100
ES.31918.1	chr7	+	250	1	Intergenic	novelGene_26164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTTCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	126085668	126085918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126085700_126085900
ES.31919.1	chr7	-	3367	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-80	1	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	7803	False	NA	0	True	AATAAA	-29	NA	126074676	126066164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.10	chr7	-	2874	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	89.9012479056882	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8195	False	NA	-1	True	AATAAA	-28	NA	126074284	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.11	chr7	-	3648	10	FSM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	-279	-3	15	0	multi-exon	FALSE	canonical	3	29	junction_9	82.2103595046059	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	7898	False	NA	-1	True	AATAAA	-28	NA	126074581	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.12	chr7	-	4718	9	NNC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	78	0	intron_retention	FALSE	canonical	0	0	junction_6	110.690729060748	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8335	False	NA	-1	True	AATAAA	-28	NA	126074144	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070400_126070566_126070659_126070871_126070974_126071244
ES.31919.13	chr7	-	3148	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	104.035369104413	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	7885	False	NA	-1	True	AATAAA	-28	NA	126074594	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074356
ES.31919.14	chr7	-	3595	14	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-11774	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	130.91489624627	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	NA	False	NA	-1	True	AATAAA	-28	NA	126086370	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074356_126074514_126082079_126082218_126085331_126085504_126085653_126085837_126086282
ES.31919.15	chr7	-	4827	8	ISM	ENSMUSG00000030733.11	ENSMUST00000205497.2	2854	9	-62	-10	-9	-1	intron_retention	FALSE	canonical	2	5	junction_1	94.4366756842156	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8195	False	NA	-2	True	AATAAA	-27	NA	126074284	126066166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.16	chr7	-	4875	9	ISM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	17	-2	-10	-1	intron_retention	FALSE	canonical	3	197	junction_2	37.3528362376942	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGGCTGATATTT	8194	False	NA	-2	True	AATAAA	-27	NA	126074285	126066166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.17	chr7	-	4375	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	102.93363557814	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8362	False	NA	-3	True	AATAAA	-26	NA	126074117	126066167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.18	chr7	-	3393	10	FSM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	100.767548176147	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8204	False	NA	-3	True	AATAAA	-26	NA	126074275	126066167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.19	chr7	-	2879	10	NIC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	112.024247816111	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8195	False	NA	-3	True	AATAAA	-26	NA	126074284	126066167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.2	chr7	-	5181	8	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	198	junction_7	37.1593370033779	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	8205	False	NA	0	True	AATAAA	-29	NA	126074274	126066164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.20	chr7	-	4418	6	NNC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	742	0	intron_retention	FALSE	non_canonical	0	0	junction_2	115.669529263328	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	NA	False	NA	-3	True	AATAAA	-26	NA	126071498	126066167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126068141_126068296_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.21	chr7	-	6489	9	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	9	junction_4	118.180939135717	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8252	False	NA	-3	True	AATAAA	-26	NA	126074227	126066167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126068659_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.23	chr7	-	3337	11	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	104.43892952343	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8172	False	NA	-4	True	AATAAA	-25	NA	126074307	126066168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072994_126074167
ES.31919.24	chr7	-	3240	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	-282	-2	-1	0	multi-exon	FALSE	canonical	1	2	junction_1	111.235111363274	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8203	False	NA	-4	True	AATAAA	-25	NA	126074276	126066168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.25	chr7	-	3591	11	NIC	ENSMUSG00000030733.11	novel	3366	10	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	120.770029394714	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8035	False	NA	-4	True	AATAAA	-25	NA	126074444	126066168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.27	chr7	-	6499	8	NIC	ENSMUSG00000030733.11	novel	3366	10	NA	NA	104	0	intron_retention	FALSE	canonical	3	197	junction_2	37.4383847549707	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8361	False	NA	-4	True	AATAAA	-25	NA	126074118	126066168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.29	chr7	-	4874	8	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	197	junction_2	43.9210795005063	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8180	False	NA	-6	True	AATAAA	-23	NA	126074299	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.3	chr7	-	3034	10	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	8189	False	NA	0	True	AATAAA	-29	NA	126074290	126066164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.30	chr7	-	4582	11	NIC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	9	junction_5	129.133419377015	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8235	False	NA	-6	True	AATAAA	-23	NA	126074244	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.31	chr7	-	4360	9	NNC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	233	0	intron_retention	FALSE	canonical	2	3	junction_2	93.9566888252241	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8718	False	NA	-6	True	AATAAA	-23	NA	126073761	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067631_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.32	chr7	-	3059	11	NIC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	107.60525080125	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8188	False	NA	-6	True	AATAAA	-23	NA	126074291	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.33	chr7	-	4750	9	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	164	3	111	0	intron_retention	FALSE	canonical	3	53	junction_2	78.2606821782177	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8368	False	NA	-6	True	AATAAA	-23	NA	126074111	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.34	chr7	-	4354	9	NIC	ENSMUSG00000030733.11	novel	2956	9	NA	NA	10	0	intron_retention	FALSE	canonical	1	2	junction_1	113.238410002967	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8227	False	NA	-6	True	AATAAA	-23	NA	126074252	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.35	chr7	-	3777	9	NIC	ENSMUSG00000030733.11	novel	3011	9	NA	NA	372	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	112.574350431171	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8857	False	NA	-6	True	AATAAA	-23	NA	126073622	126066170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.36	chr7	-	4999	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	9	junction_4	93.1849639158593	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGATGGCTGTGGCTGA	8221	False	NA	-7	True	AATAAA	-22	NA	126074258	126066171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126068659_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.37	chr7	-	3272	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205889.2	3011	9	-262	1	4	-1	multi-exon	FALSE	canonical	2	5	junction_1	110.55477997355	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGATGGCTGTGGCTGA	8221	False	NA	-7	True	AATAAA	-22	NA	126074258	126066171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.39	chr7	-	2902	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205497.2	2854	9	-43	-5	-3	-1	multi-exon	FALSE	canonical	2	5	junction_1	88.9690957580215	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGATGGCTGTGGCTGA	8214	False	NA	-7	True	AATAAA	-22	NA	126074265	126066171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.4	chr7	-	4506	10	ISM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	-36	-1	4	1	intron_retention	FALSE	canonical	3	19	junction_9	85.0607625955313	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	8181	False	NA	0	True	AATAAA	-29	NA	126074298	126066164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.41	chr7	-	3356	11	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	115.403856088087	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATCATGATGGCTGTG	8198	False	NA	-12	True	AATAAA	-17	NA	126074281	126066176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072994_126074167
ES.31919.42	chr7	-	4715	8	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	-242	7	-14	-1	intron_retention	FALSE	canonical	1	2	junction_1	95.4580792702178	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCATCATGATGGCTGT	8243	False	NA	-13	True	AATAAA	-16	NA	126074236	126066177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.43	chr7	-	5550	8	NIC	ENSMUSG00000030733.11	novel	3393	10	NA	NA	48	-1	intron_retention	FALSE	canonical	3	231	junction_4	28.8316719272825	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCATCATGATGGCTGT	7931	False	NA	-13	True	AATAAA	-16	NA	126074548	126066177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.45	chr7	-	3166	10	NNC	ENSMUSG00000030733.11	novel	3366	10	NA	NA	-91	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.557768902346	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCATCATGATGGCTGT	8392	False	NA	-13	True	AATAAA	-16	NA	126074087	126066177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068525_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ES.31919.47	chr7	-	5449	8	NIC	ENSMUSG00000030733.11	novel	2909	10	NA	NA	6	-3	intron_retention	FALSE	canonical	3	9	junction_4	124.75903304583	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCCATCATGATGGCT	8210	False	NA	-15	True	AATAAA	-14	NA	126074269	126066179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070659_126070871_126070974_126071244
ES.31919.5	chr7	-	5248	10	FSM	ENSMUSG00000030733.11	ENSMUST00000206664.2	2909	10	-2334	-5	22	0	multi-exon	FALSE	canonical	3	9	junction_5	113.335294100686	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	7905	False	NA	-1	True	AATAAA	-28	NA	126074574	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ES.31919.6	chr7	-	4935	11	NNC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	9	junction_5	121.130549408479	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8211	False	NA	-1	True	AATAAA	-28	NA	126074268	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072994_126074167
ES.31919.7	chr7	-	4260	11	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	122.165461567499	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8509	False	NA	-1	True	AATAAA	-28	NA	126073970	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650
ES.31919.8	chr7	-	3565	8	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	198	junction_7	32.7451507548703	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8203	False	NA	-1	True	AATAAA	-28	NA	126074276	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.31919.9	chr7	-	3434	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	-19	0	intron_retention	FALSE	canonical	3	198	junction_8	37.1247895616931	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8158	False	NA	-1	True	AATAAA	-28	NA	126074321	126066165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ES.3192.1	chr10	+	2390	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	-95	-1	-95	1	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTCTTTGTTTTGTC	1196	False	NA	33	True	AATAAA	-16	NA	77417458	77434567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ES.3192.10	chr10	+	1753	2	ISM	ENSMUSG00000009291.14	ENSMUST00000167006.2	831	3	1525	-1601	1525	-1	3prime_fragment	FALSE	canonical	3	672	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	NA	False	NA	31	True	AATAAA	-14	NA	77429695	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_77429745_77432861
ES.3192.2	chr10	+	2168	5	NIC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	298.935193645713	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	1307	False	NA	31	True	AATAAA	-14	NA	77417569	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77417762_77423084_77423138_77428679_77428852_77429697_77429745_77432861
ES.3192.3	chr10	+	2267	6	NNC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.023199021464	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	1307	False	NA	31	True	AATAAA	-14	NA	77417569	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77417762_77423084_77423138_77425467_77425567_77428679_77428852_77429697_77429745_77432861
ES.3192.4	chr10	+	10825	3	NIC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	16	0	intron_retention	FALSE	canonical	3	637	junction_2	63.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1310	False	NA	32	True	AATAAA	-15	NA	77417572	77434566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77417762_77423084_77428852_77429697
ES.3192.5	chr10	+	803	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	28	1463	-8	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTTGATGTCCTTTT	1319	False	NA	8	True	NA	NA	NA	77417581	77433103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ES.3192.6	chr10	+	3435	6	NNC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.023199021464	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATTTCTTTGTTT	1324	False	NA	29	True	AATAAA	-12	NA	77417586	77434563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77417762_77423084_77423138_77425467_77425577_77427502_77428852_77429697_77429745_77432861
ES.3192.7	chr10	+	4590	5	NIC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	637	junction_3	46.5476905979233	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	1324	False	NA	31	True	AATAAA	-14	NA	77417586	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77417762_77423084_77425577_77428679_77428852_77429697_77429745_77432861
ES.3192.8	chr10	+	2113	7	NNC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	256.409665704448	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	1324	False	NA	31	True	AATAAA	-14	NA	77417586	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861_77433434_77433580
ES.3192.9	chr10	+	5363	5	NIC	ENSMUSG00000009291.14	novel	2294	6	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	637	junction_3	51.7512077153761	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGATTTCTTTGTTTTG	1324	False	NA	31	True	AATAAA	-14	NA	77417586	77434565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77417762_77423084_77423138_77425467_77428852_77429697_77429745_77432861
ES.31920.1	chr7	+	1755	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	-73	-3	-73	-1	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTCTTGTGTCTTCTG	NA	False	NA	3	True	AATAAA	-20	NA	126086459	126089902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ES.31920.2	chr7	+	1521	9	NIC	ENSMUSG00000073838.11	novel	1679	10	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	214.257110442104	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGCTTGTCTTGTGTC	NA	False	NA	-2	True	AATAAA	-15	NA	126086521	126089897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126086663_126086759_126086955_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ES.31920.3	chr7	+	1768	9	NIC	ENSMUSG00000073838.11	novel	1679	10	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	613	junction_4	32.5269119345812	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGCTTGTCTTGTGTC	NA	False	NA	-2	True	AATAAA	-15	NA	126086524	126089897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088613_126088723_126088876_126088963_126089084_126089492
ES.31920.4	chr7	+	1773	9	FSM	ENSMUSG00000073838.11	ENSMUST00000106392.10	1754	9	-25	6	-8	-2	multi-exon	FALSE	canonical	3	611	junction_6	24.9646625252576	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGCTTGTCTTGTGTC	NA	False	NA	-2	True	AATAAA	-15	NA	126086524	126089897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126089084_126089492
ES.31920.5	chr7	+	1673	10	NNC	ENSMUSG00000073838.11	novel	1679	10	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	207.61877457387	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTCAGCTTGTCTTGTG	NA	False	NA	-4	True	AATAAA	-13	NA	126086524	126089895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088018_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ES.31920.6	chr7	+	1702	10	NNC	ENSMUSG00000073838.11	novel	1679	10	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	206.188754468171	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGCTTGTCTTGTGTC	NA	False	NA	-2	True	AATAAA	-15	NA	126086538	126089897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088692_126088876_126088963_126089084_126089492
ES.31920.7	chr7	+	1866	8	NIC	ENSMUSG00000073838.11	novel	1754	9	NA	NA	7	-5	intron_retention	FALSE	canonical	3	611	junction_6	25.6053247013434	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTCAGCTTGTCTTGT	NA	False	NA	-5	True	AATAAA	-12	NA	126086539	126089894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126089084_126089492
ES.31920.8	chr7	+	2224	8	NIC	ENSMUSG00000073838.11	novel	1754	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	611	junction_5	25.1103686202512	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGCTTGTCTTGTGTC	NA	False	NA	-2	True	AATAAA	-15	NA	126086550	126089897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126086663_126086759_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126089084_126089492
ES.31921.1	chr7	+	3230	22	Antisense	novelGene_ENSMUSG00000032637.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCACCGGGATGCCTCG	NA	False	NA	NA	False	NA	NA	NA	126091663	126101242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126092176_126092337_126092546_126092720_126092847_126092932_126093063_126093310_126093504_126093593_126093664_126093747_126093898_126094372_126094444_126094532_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096539_126096666_126096840_126097275_126097477_126098320_126098414_126099300_126099428_126099896_126100046_126100274_126100346_126100426_126100482_126100590_126100630_126101123
ES.31921.2	chr7	+	4802	1	Antisense	novelGene_ENSMUSG00000032637.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGGGGGGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	126093862	126098664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126093900_126098700
ES.31921.3	chr7	+	1915	17	Antisense	novelGene_ENSMUSG00000032637.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACAATCCGCTCCCAAGT	NA	False	NA	NA	False	NA	NA	NA	126093862	126101629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126093898_126094372_126094444_126094532_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096539_126096666_126096840_126097275_126097477_126098320_126098414_126099300_126099428_126099896_126100046_126100274_126100346_126100426_126100482_126100590_126100630_126100875_126101011_126101606
ES.31921.4	chr7	+	2240	16	Antisense	novelGene_ENSMUSG00000032637.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGGATCTCGCGGGCCG	NA	False	NA	NA	False	NA	NA	NA	126093862	126102556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126093898_126094372_126094444_126094532_126094828_126094992_126095062_126095459_126095533_126095608_126095799_126096424_126096539_126096666_126096837_126097273_126097477_126098320_126098414_126099300_126099428_126099896_126100046_126100274_126100346_126100426_126100482_126100590_126100630_126102070
ES.31922.1	chr7	-	4031	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-17	2	intron_retention	FALSE	canonical	3	238	junction_21	181.885750689423	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGGGTTTGATTCTT	6911	False	NA	2	True	NA	NA	NA	126101603	126090877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.10	chr7	-	4255	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-17	0	intron_retention	FALSE	canonical	2	11	junction_3	262.579675846781	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7225	False	NA	0	True	NA	NA	NA	126101289	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593
ES.31922.100	chr7	-	3517	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	251.885731012305	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9420	False	NA	-8	True	NA	NA	NA	126102603	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091103_126092002_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.102	chr7	-	4029	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	134	-1	intron_retention	FALSE	canonical	3	20	junction_21	274.150570211685	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	7376	False	NA	-8	True	NA	NA	NA	126101138	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101012
ES.31922.103	chr7	-	3995	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	3	-1	intron_retention	FALSE	canonical	2	3	junction_11	266.522452500863	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	6931	False	NA	-8	True	NA	NA	NA	126101583	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095527_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.107	chr7	-	3521	24	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	339.779379105072	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6928	False	NA	-52	True	NA	NA	NA	126101586	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.108	chr7	-	3342	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-37	26	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	275.704576009384	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6987	False	NA	-52	True	NA	NA	NA	126101527	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.109	chr7	-	2454	6	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-1893	26	intron_retention	FALSE	canonical	3	978	junction_3	69.606321551997	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126094441	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371
ES.31922.11	chr7	-	4462	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-37	0	intron_retention	FALSE	canonical	3	42	junction_2	251.052189422954	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9377	False	NA	0	True	NA	NA	NA	126102646	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.110	chr7	-	4043	23	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	104	26	intron_retention	FALSE	canonical	0	0	junction_22	320.431710985287	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7346	False	NA	-52	True	NA	NA	NA	126101168	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876_126101013_126101120
ES.31922.111	chr7	-	3900	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	83	26	intron_retention	FALSE	canonical	2	3	junction_11	277.907715640819	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7325	False	NA	-52	True	NA	NA	NA	126101189	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095527_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.114	chr7	-	1442	3	NNC	ENSMUSG00000032637.16	novel	503	4	NA	NA	1	26	intron_retention	FALSE	non_canonical	0	0	junction_2	490	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7243	False	NA	-52	True	NA	NA	NA	126101271	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092485_126101220
ES.31922.115	chr7	-	4237	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-1	26	intron_retention	FALSE	canonical	3	263	junction_1	218.106705874424	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9413	False	NA	-52	True	NA	NA	NA	126102610	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.117	chr7	-	4530	21	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	23	26	intron_retention	FALSE	canonical	3	38	junction_1	272.799097322554	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7047	False	NA	-52	True	NA	NA	NA	126101467	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593
ES.31922.118	chr7	-	3970	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	26	intron_retention	FALSE	canonical	3	238	junction_2	252.595784139976	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9496	False	NA	-52	True	NA	NA	NA	126102527	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100631_126102071
ES.31922.119	chr7	-	3736	23	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	9	26	intron_retention	FALSE	canonical	3	137	junction_13	271.690590303573	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6937	False	NA	-52	True	NA	NA	NA	126101577	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.12	chr7	-	4449	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-233	0	intron_retention	FALSE	canonical	3	137	junction_13	263.178850666266	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9181	False	NA	0	True	NA	NA	NA	126102842	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.120	chr7	-	3802	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	4	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	310.147352342865	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9418	False	NA	-52	True	NA	NA	NA	126102605	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091361_126091929_126092174_126092339_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.121	chr7	-	3776	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-2	26	intron_retention	FALSE	canonical	3	137	junction_13	282.118685094304	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7240	False	NA	-52	True	NA	NA	NA	126101274	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.122	chr7	-	5203	9	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1912	26	intron_retention	FALSE	canonical	1	2	junction_1	340.249150439792	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9154	False	NA	-52	True	NA	NA	NA	126099360	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092724_126092847_126092932_126093896_126094371_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126098414_126099300
ES.31922.124	chr7	-	3758	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	4	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	296.471480657036	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9418	False	NA	-52	True	NA	NA	NA	126102605	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.127	chr7	-	4536	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	19	26	intron_retention	FALSE	canonical	3	324	junction_20	170.823732250528	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9433	False	NA	-52	True	NA	NA	NA	126102590	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.128	chr7	-	3549	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	92	26	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_22	265.803541600319	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7334	False	NA	-52	True	NA	NA	NA	126101180	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876
ES.31922.129	chr7	-	3268	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	104	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	312.887488689644	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7346	False	NA	-52	True	NA	NA	NA	126101168	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.13	chr7	-	4640	22	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-191	0	intron_retention	FALSE	canonical	3	137	junction_12	233.379208318315	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9223	False	NA	0	True	NA	NA	NA	126102800	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.130	chr7	-	4057	10	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	4214	26	intron_retention	FALSE	canonical	3	720	junction_8	130.052790800743	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126097058	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092549_126092724_126092847_126092932_126093063_126093310_126093896_126094371_126094442_126094531_126094828_126094992_126095533_126095608_126095801_126096425_126096537_126096664
ES.31922.131	chr7	-	4763	21	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-52	26	intron_retention	FALSE	canonical	0	0	junction_20	301.15067242163	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6876	False	NA	-52	True	NA	NA	NA	126101638	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096377_126096537_126096664_126096841_126097276_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101608
ES.31922.133	chr7	-	4550	19	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	3	26	intron_retention	FALSE	canonical	3	324	junction_18	172.810473862388	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9499	False	NA	-52	True	NA	NA	NA	126102524	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094828_126094992_126095064_126095460_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.134	chr7	-	3271	23	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-26	26	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	257.496244857478	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6998	False	NA	-52	True	NA	NA	NA	126101516	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.135	chr7	-	3866	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	102	26	intron_retention	FALSE	canonical	0	0	junction_5	278.444912255544	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7344	False	NA	-52	True	NA	NA	NA	126101170	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.136	chr7	-	3808	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	38	26	intron_retention	FALSE	canonical	3	143	junction_21	242.59187193006	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7280	False	NA	-52	True	NA	NA	NA	126101234	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.137	chr7	-	3313	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	94	26	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	308.243158870636	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7336	False	NA	-52	True	NA	NA	NA	126101178	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.138	chr7	-	4448	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	17	26	intron_retention	FALSE	canonical	3	324	junction_20	169.88863263915	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9431	False	NA	-52	True	NA	NA	NA	126102592	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.139	chr7	-	3511	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	7	26	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_4	305.345749053476	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6935	False	NA	-52	True	NA	NA	NA	126101579	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.14	chr7	-	3413	24	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	331.640910868691	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6963	False	NA	0	True	NA	NA	NA	126101551	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.140	chr7	-	3467	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	26	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_23	302.920079673149	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6929	False	NA	-52	True	NA	NA	NA	126101585	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091774_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.142	chr7	-	4111	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-11	26	intron_retention	FALSE	canonical	2	11	junction_3	317.534354229117	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9403	False	NA	-52	True	NA	NA	NA	126102620	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.143	chr7	-	3825	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	3	26	intron_retention	FALSE	canonical	3	67	junction_2	273.775685613346	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9499	False	NA	-52	True	NA	NA	NA	126102524	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.144	chr7	-	4417	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	10	26	intron_retention	FALSE	canonical	1	3	junction_12	254.833946200373	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9424	False	NA	-52	True	NA	NA	NA	126102599	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096377_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.145	chr7	-	3639	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	94	26	intron_retention	FALSE	canonical	3	38	junction_1	266.580771720767	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7336	False	NA	-52	True	NA	NA	NA	126101178	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.146	chr7	-	3751	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	1	26	intron_retention	FALSE	canonical	0	0	junction_22	299.601057054927	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6929	False	NA	-52	True	NA	NA	NA	126101585	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101460
ES.31922.147	chr7	-	4535	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	26	intron_retention	FALSE	canonical	3	324	junction_20	170.486539058073	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9420	False	NA	-52	True	NA	NA	NA	126102603	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.148	chr7	-	3719	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	8	26	intron_retention	FALSE	canonical	3	38	junction_1	317.796662991077	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7250	False	NA	-52	True	NA	NA	NA	126101264	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.149	chr7	-	4340	19	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	26	intron_retention	FALSE	canonical	1	2	junction_1	270.678001039821	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9420	False	NA	-52	True	NA	NA	NA	126102603	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.15	chr7	-	3858	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	294.882242920937	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9439	False	NA	0	True	NA	NA	NA	126102584	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096377_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.150	chr7	-	3337	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	111	26	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	319.51286764353	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7353	False	NA	-52	True	NA	NA	NA	126101161	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.152	chr7	-	3513	24	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	35	26	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	324.45199399652	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7277	False	NA	-52	True	NA	NA	NA	126101237	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.154	chr7	-	6867	13	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	26	intron_retention	FALSE	canonical	3	143	junction_12	247.663568284791	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7243	False	NA	-52	True	NA	NA	NA	126101271	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126093063_126093310_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126100046_126100274_126100485_126100593_126100631_126101124
ES.31922.155	chr7	-	3843	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	93	26	intron_retention	FALSE	canonical	3	30	junction_21	259.609780430626	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7335	False	NA	-52	True	NA	NA	NA	126101179	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101120
ES.31922.156	chr7	-	2117	8	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-1893	26	intron_retention	FALSE	canonical	3	263	junction_1	267.046506688805	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126094441	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371
ES.31922.157	chr7	-	4916	21	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	21	26	intron_retention	FALSE	canonical	0	0	junction_2	261.635524155264	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9517	False	NA	-52	True	NA	NA	NA	126102506	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092709_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.158	chr7	-	4967	20	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	10	26	intron_retention	FALSE	canonical	3	324	junction_19	174.646473144228	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9424	False	NA	-52	True	NA	NA	NA	126102599	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.159	chr7	-	3922	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-27	26	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	301.05378878684	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9469	False	NA	-52	True	NA	NA	NA	126102554	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091368_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.16	chr7	-	3773	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	0	intron_retention	FALSE	canonical	3	238	junction_22	223.990522416087	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6934	False	NA	0	True	NA	NA	NA	126101580	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.161	chr7	-	3415	23	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	21	26	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	301.355371475863	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6949	False	NA	-52	True	NA	NA	NA	126101565	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.162	chr7	-	3370	2	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-2229	26	intron_retention	FALSE	canonical	3	1162	junction_1	0	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126094777	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126093896_126094371
ES.31922.166	chr7	-	3349	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-6	26	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_2	278.199871031541	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7018	False	NA	-52	True	NA	NA	NA	126101496	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091696_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.167	chr7	-	2772	15	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-4250	26	intron_retention	FALSE	canonical	3	21	junction_2	305.482021248587	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126096798	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664
ES.31922.169	chr7	-	4080	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-23	26	intron_retention	FALSE	canonical	0	0	junction_22	258.244330620288	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9473	False	NA	-52	True	NA	NA	NA	126102550	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100624_126102071
ES.31922.17	chr7	-	3715	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	34	0	intron_retention	FALSE	canonical	3	21	junction_22	255.019428849861	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7058	False	NA	0	True	NA	NA	NA	126101456	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ES.31922.170	chr7	-	4911	20	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	6	26	intron_retention	FALSE	canonical	3	42	junction_2	309.705686399791	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9420	False	NA	-52	True	NA	NA	NA	126102603	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.172	chr7	-	3982	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	97	26	intron_retention	FALSE	canonical	3	143	junction_20	203.899828347157	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7339	False	NA	-52	True	NA	NA	NA	126101175	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.173	chr7	-	1710	6	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-1893	26	intron_retention	FALSE	canonical	0	0	junction_2	459.704513791196	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126094441	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092932_126093063_126093310_126093665_126093748_126093896_126094371
ES.31922.174	chr7	-	3616	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	39	26	intron_retention	FALSE	canonical	1	34	junction_2	295.722871163063	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7281	False	NA	-52	True	NA	NA	NA	126101233	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091774_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100631_126101124
ES.31922.176	chr7	-	3451	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	9	26	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	308.838056559719	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6937	False	NA	-52	True	NA	NA	NA	126101577	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.179	chr7	-	3425	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	80	26	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_22	270.893352959584	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7322	False	NA	-52	True	NA	NA	NA	126101192	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101012
ES.31922.18	chr7	-	3711	14	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	2865	0	intron_retention	FALSE	canonical	3	720	junction_10	99.74778845556	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	NA	False	NA	0	True	NA	NA	NA	126098407	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321
ES.31922.180	chr7	-	4347	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-32	26	intron_retention	FALSE	canonical	2	11	junction_2	256.025854349201	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9382	False	NA	-52	True	NA	NA	NA	126102641	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.182	chr7	-	3847	21	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	41	26	intron_retention	FALSE	canonical	1	23	junction_10	269.743971202324	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6969	False	NA	-52	True	NA	NA	NA	126101545	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.185	chr7	-	3973	21	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-19	26	intron_retention	FALSE	canonical	3	238	junction_20	186.208559148069	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7005	False	NA	-52	True	NA	NA	NA	126101509	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.187	chr7	-	3992	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	26	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	330.251676956113	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9414	False	NA	-52	True	NA	NA	NA	126102609	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.188	chr7	-	1997	9	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	9	26	intron_retention	FALSE	non_canonical	0	0	junction_4	361.729094074557	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6937	False	NA	-52	True	NA	NA	NA	126101577	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093019_126099987_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.189	chr7	-	1789	6	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-15	26	intron_retention	FALSE	non_canonical	0	0	junction_5	387.329627062015	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6913	False	NA	-52	True	NA	NA	NA	126101601	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093362_126101570
ES.31922.19	chr7	-	3999	22	FSM	ENSMUSG00000032637.16	ENSMUST00000166682.9	2745	22	1	-1255	1	0	multi-exon	FALSE	canonical	3	21	junction_21	274.001324127426	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7025	False	NA	0	True	NA	NA	NA	126101489	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ES.31922.191	chr7	-	3695	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	83	26	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	300.653333959848	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	7325	False	NA	-52	True	NA	NA	NA	126101189	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876
ES.31922.193	chr7	-	1565	10	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-1893	26	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	428.178946092102	1473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126094441	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371
ES.31922.194	chr7	-	1049	5	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-298	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	458.627504081471	1473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	NA	False	NA	-52	True	NA	NA	NA	126092846	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091658_126091929_126092174_126092335_126092549_126092724
ES.31922.195	chr7	-	4536	21	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	26	intron_retention	FALSE	canonical	3	22	junction_20	223.149299797243	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	6928	False	NA	-52	True	NA	NA	NA	126101586	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.196	chr7	-	4540	20	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	3	26	intron_retention	FALSE	canonical	3	324	junction_19	173.993520432097	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAAAATA	9499	False	NA	-52	True	NA	NA	NA	126102524	126090931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.199	chr7	-	3549	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	304.688827598775	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTACATAAAAAAATTAAAAA	6928	False	NA	-58	True	NA	NA	NA	126101586	126090937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.2	chr7	-	4681	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-249	1	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTATGGGTTTGATTCT	9165	False	NA	1	True	NA	NA	NA	126102858	126090878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.20	chr7	-	3976	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	0	intron_retention	FALSE	canonical	2	11	junction_2	276.802056865203	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7243	False	NA	0	True	NA	NA	NA	126101271	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092485_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.200	chr7	-	4359	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	22	20	intron_retention	FALSE	canonical	3	324	junction_20	170.778592042445	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTACATAAAAAAATTAAAAA	9518	False	NA	-58	True	NA	NA	NA	126102505	126090937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.21	chr7	-	4431	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-233	0	intron_retention	FALSE	canonical	3	263	junction_1	213.100687217479	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9181	False	NA	0	True	NA	NA	NA	126102842	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.22	chr7	-	4102	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	48	0	intron_retention	FALSE	canonical	3	143	junction_20	202.363997539088	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7290	False	NA	0	True	NA	NA	NA	126101224	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100631_126101124
ES.31922.23	chr7	-	3976	24	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	312.933386438434	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9431	False	NA	0	True	NA	NA	NA	126102592	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091368_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.24	chr7	-	3983	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-20	0	intron_retention	FALSE	canonical	3	22	junction_21	221.763566360842	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6908	False	NA	0	True	NA	NA	NA	126101606	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.25	chr7	-	3813	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	248.253407090882	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9413	False	NA	0	True	NA	NA	NA	126102610	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.27	chr7	-	3890	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	304.5539612481	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	9413	False	NA	-1	True	NA	NA	NA	126102610	126090880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.28	chr7	-	4277	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-23	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	251.885731012305	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTATGGGTTTGATT	9473	False	NA	-1	True	NA	NA	NA	126102550	126090880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091111_126091204_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.29	chr7	-	3855	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	232.057278658767	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTATGGGTTTGAT	9392	False	NA	-2	True	NA	NA	NA	126102631	126090881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.3	chr7	-	3482	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	285.415407137351	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTATGGGTTTGATTCT	7243	False	NA	1	True	NA	NA	NA	126101271	126090878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.30	chr7	-	3418	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	241.997545407946	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTATGGGTTTGAT	6924	False	NA	-2	True	NA	NA	NA	126101590	126090881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.32	chr7	-	3578	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	256.034939723406	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6923	False	NA	-3	True	NA	NA	NA	126101591	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.34	chr7	-	4004	22	NIC	ENSMUSG00000032637.16	novel	2745	22	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	21	junction_21	221.953693767125	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6999	False	NA	-3	True	NA	NA	NA	126101515	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ES.31922.35	chr7	-	4385	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	28	-3	intron_retention	FALSE	canonical	0	0	junction_6	256.526492335278	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9442	False	NA	-3	True	NA	NA	NA	126102581	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093656_126093754_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.36	chr7	-	3598	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	3	143	junction_23	266.578786716817	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7246	False	NA	-3	True	NA	NA	NA	126101268	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.37	chr7	-	4108	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-52	-3	intron_retention	FALSE	canonical	3	137	junction_12	256.469311880599	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7190	False	NA	-3	True	NA	NA	NA	126101324	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.38	chr7	-	4217	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	69	-3	intron_retention	FALSE	canonical	3	56	junction_21	215.324666534377	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7311	False	NA	-3	True	NA	NA	NA	126101203	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876
ES.31922.39	chr7	-	4100	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-273	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	291.38081072628	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9141	False	NA	-3	True	NA	NA	NA	126102882	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.4	chr7	-	4228	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-233	0	combination_of_known_splicesites	FALSE	canonical	3	238	junction_2	247.412454204056	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9181	False	NA	0	True	NA	NA	NA	126102842	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.40	chr7	-	4237	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	-3	intron_retention	FALSE	canonical	1	3	junction_13	280.916137010777	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9420	False	NA	-3	True	NA	NA	NA	126102603	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096377_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.41	chr7	-	4349	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-27	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	257.812285593946	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9469	False	NA	-3	True	NA	NA	NA	126102554	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093615_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.42	chr7	-	3441	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	253.996551027537	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7243	False	NA	-3	True	NA	NA	NA	126101271	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.43	chr7	-	3909	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	251.251232470971	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9391	False	NA	-3	True	NA	NA	NA	126102632	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.44	chr7	-	3409	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_23	322.934816999105	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6935	False	NA	-3	True	NA	NA	NA	126101579	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091696_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.45	chr7	-	3567	24	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	316.305145673579	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	6929	False	NA	-3	True	NA	NA	NA	126101585	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.47	chr7	-	3821	23	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	330.634229627927	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9420	False	NA	-3	True	NA	NA	NA	126102603	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096514_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.48	chr7	-	3952	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	80	-3	intron_retention	FALSE	canonical	3	42	junction_2	272.255007512527	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	7322	False	NA	-3	True	NA	NA	NA	126101192	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.49	chr7	-	4405	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-233	-3	intron_retention	FALSE	canonical	3	38	junction_1	245.905881343531	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGCCTATGGGTTTGA	9181	False	NA	-3	True	NA	NA	NA	126102842	126090882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.5	chr7	-	4053	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-12	0	intron_retention	FALSE	canonical	3	143	junction_21	199.099617268271	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7230	False	NA	0	True	NA	NA	NA	126101284	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.50	chr7	-	3751	23	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	3	intron_retention	FALSE	canonical	3	38	junction_1	255.244187086253	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	6929	False	NA	-4	True	NA	NA	NA	126101585	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.51	chr7	-	4303	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-258	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	273.808869079125	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9156	False	NA	-4	True	NA	NA	NA	126102867	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.52	chr7	-	5744	14	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-27	3	intron_retention	FALSE	canonical	3	324	junction_13	199.004266850869	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9469	False	NA	-4	True	NA	NA	NA	126102554	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126097478_126098321_126098414_126099300_126099426_126099894_126100631_126102071
ES.31922.53	chr7	-	3523	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_23	281.371015552766	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	6928	False	NA	-4	True	NA	NA	NA	126101586	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.54	chr7	-	4425	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	2	3	intron_retention	FALSE	canonical	3	238	junction_2	252.094044008964	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9416	False	NA	-4	True	NA	NA	NA	126102607	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.55	chr7	-	3686	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	40	3	intron_retention	FALSE	canonical	3	22	junction_22	254.866716909897	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	6968	False	NA	-4	True	NA	NA	NA	126101546	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
ES.31922.57	chr7	-	3141	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	104	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.40181814019	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7346	False	NA	-4	True	NA	NA	NA	126101168	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091476_126092429_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.58	chr7	-	4140	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-22	3	intron_retention	FALSE	canonical	0	0	junction_3	282.725007298729	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9392	False	NA	-4	True	NA	NA	NA	126102631	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126092174_126092335_126092473_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.59	chr7	-	4286	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	17	3	intron_retention	FALSE	canonical	1	16	junction_1	249.354754092297	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9431	False	NA	-4	True	NA	NA	NA	126102592	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091984_126092107_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.6	chr7	-	4092	21	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	238	junction_20	186.136099400412	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6929	False	NA	0	True	NA	NA	NA	126101585	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100485_126100593_126100631_126101467
ES.31922.61	chr7	-	4083	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	66	3	intron_retention	FALSE	canonical	3	20	junction_21	222.143862601716	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7308	False	NA	-4	True	NA	NA	NA	126101206	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101012
ES.31922.62	chr7	-	3376	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	24	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	310.006841433439	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7048	False	NA	-4	True	NA	NA	NA	126101466	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ES.31922.63	chr7	-	3975	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	10	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	303.396637833664	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	9424	False	NA	-4	True	NA	NA	NA	126102599	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095527_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.65	chr7	-	3783	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	22	3	intron_retention	FALSE	canonical	3	238	junction_1	227.1981877765	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	6950	False	NA	-4	True	NA	NA	NA	126101564	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.66	chr7	-	3711	25	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	320.211515924327	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7271	False	NA	-4	True	NA	NA	NA	126101243	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876_126101016_126101124
ES.31922.67	chr7	-	3647	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-28	3	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	303.426562184232	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGCCTATGGGTTTG	7214	False	NA	-4	True	NA	NA	NA	126101300	126090883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.68	chr7	-	4077	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	311.725625806572	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	9392	False	NA	-5	True	NA	NA	NA	126102631	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091774_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.69	chr7	-	3331	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	302.715773159363	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	7025	False	NA	-5	True	NA	NA	NA	126101489	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091368_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.7	chr7	-	4715	17	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-13	0	intron_retention	FALSE	canonical	1	2	junction_1	290.267596096688	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9401	False	NA	0	True	NA	NA	NA	126102622	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092724_126092847_126092932_126093063_126093310_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100485_126100593_126100631_126102071
ES.31922.70	chr7	-	3873	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	267.820172153773	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	9408	False	NA	-5	True	NA	NA	NA	126102615	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.71	chr7	-	6033	1	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	4355	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	NA	False	NA	-5	True	NA	NA	NA	126096917	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126090900_126096900
ES.31922.72	chr7	-	4475	22	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	17	2	intron_retention	FALSE	canonical	0	0	junction_12	255.33014509297	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	9431	False	NA	-5	True	NA	NA	NA	126102592	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096377_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.73	chr7	-	5824	17	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-34	2	intron_retention	FALSE	canonical	3	324	junction_16	182.306050622984	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	9462	False	NA	-5	True	NA	NA	NA	126102561	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095533_126095608_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.74	chr7	-	3933	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-25	2	intron_retention	FALSE	canonical	0	0	junction_5	308.878866539961	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6999	False	NA	-5	True	NA	NA	NA	126101515	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.75	chr7	-	3542	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	281.659469414353	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6934	False	NA	-5	True	NA	NA	NA	126101580	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.76	chr7	-	8222	8	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	-26	2	intron_retention	FALSE	canonical	3	800	junction_7	117.808561415787	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6998	False	NA	-5	True	NA	NA	NA	126101516	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126093063_126093310_126093896_126094371_126094828_126094992_126095064_126095460_126096537_126096664_126098414_126099300_126100485_126100593
ES.31922.77	chr7	-	4107	21	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	9	2	intron_retention	FALSE	canonical	3	238	junction_20	184.418681266297	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	6937	False	NA	-5	True	NA	NA	NA	126101577	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100631_126101467
ES.31922.78	chr7	-	3576	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	291.138460229106	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAACCTGCCTATGGGTTT	7243	False	NA	-5	True	NA	NA	NA	126101271	126090884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.8	chr7	-	3392	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_22	270.750456910705	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7018	False	NA	0	True	NA	NA	NA	126101496	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101401
ES.31922.80	chr7	-	3984	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_5	267.121262177841	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACCTGCCTATGGGTT	6929	False	NA	-6	True	NA	NA	NA	126101585	126090885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093612_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.81	chr7	-	3829	23	FSM	ENSMUSG00000032637.16	ENSMUST00000040202.15	3853	23	17	7	17	0	multi-exon	FALSE	canonical	3	129	junction_1	278.170751413855	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9431	False	NA	-7	True	NA	NA	NA	126102592	126090886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.82	chr7	-	4592	22	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	71	0	intron_retention	FALSE	canonical	3	137	junction_13	287.180128671632	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7313	False	NA	-7	True	NA	NA	NA	126101201	126090886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.83	chr7	-	3862	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	23	junction_12	338.501596124025	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9486	False	NA	-7	True	NA	NA	NA	126102537	126090886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.84	chr7	-	3450	22	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	97	0	intron_retention	FALSE	canonical	3	129	junction_1	259.397522790662	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7339	False	NA	-7	True	NA	NA	NA	126101175	126090886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100631_126101124
ES.31922.85	chr7	-	4450	22	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	42	junction_2	295.647496483347	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9399	False	NA	-8	True	NA	NA	NA	126102624	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.86	chr7	-	3637	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	281.499038869919	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	6913	False	NA	-8	True	NA	NA	NA	126101601	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.87	chr7	-	3982	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_2	296.166438926347	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9389	False	NA	-8	True	NA	NA	NA	126102634	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091774_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.88	chr7	-	3957	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	273.97854979303	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9421	False	NA	-8	True	NA	NA	NA	126102602	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.89	chr7	-	4238	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-233	-1	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	287.428781349095	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9181	False	NA	-8	True	NA	NA	NA	126102842	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.9	chr7	-	4030	22	FSM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	0	-7	0	0	multi-exon	FALSE	canonical	3	137	junction_12	243.863600773697	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6928	False	NA	0	True	NA	NA	NA	126101586	126090879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.90	chr7	-	3599	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	294.5619027569	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	6915	False	NA	-8	True	NA	NA	NA	126101599	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.91	chr7	-	3555	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_2	324.564055445079	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	6928	False	NA	-8	True	NA	NA	NA	126101586	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091774_126091983_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ES.31922.92	chr7	-	3203	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	104	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	329.487935013906	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	7346	False	NA	-8	True	NA	NA	NA	126101168	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091479_126092388_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101120
ES.31922.93	chr7	-	3799	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	1	-1	intron_retention	FALSE	canonical	3	143	junction_22	237.014331609778	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	7243	False	NA	-8	True	NA	NA	NA	126101271	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
ES.31922.94	chr7	-	4157	21	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-29	-1	intron_retention	FALSE	canonical	1	2	junction_1	262.836731641527	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9467	False	NA	-8	True	NA	NA	NA	126102556	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092174_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.95	chr7	-	5369	17	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	720	junction_10	105.978697741574	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	6928	False	NA	-8	True	NA	NA	NA	126101586	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274
ES.31922.96	chr7	-	4380	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	-29	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	257.813200318571	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9467	False	NA	-8	True	NA	NA	NA	126102556	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096547_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31922.97	chr7	-	3629	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	80	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_23	281.627151659752	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	7322	False	NA	-8	True	NA	NA	NA	126101192	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101012
ES.31922.98	chr7	-	4379	22	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	6	-1	intron_retention	FALSE	canonical	1	12	junction_3	254.300409776898	1474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTAACCTGCCTATGGG	9420	False	NA	-8	True	NA	NA	NA	126102603	126090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126092174_126092335_126092549_126092724_126092809_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ES.31923.1	chr7	-	196	1	Intergenic	novelGene_26165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTCTGGGGACCT	3430	False	NA	NA	False	NA	NA	NA	126108593	126108397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126108400_126108600
ES.31924.1	chr7	-	193	1	Intergenic	novelGene_26166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-43	NA	126112344	126112151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126112200_126112300
ES.31925.1	chr7	-	2936	22	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	7	20037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	592.788238489606	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAAGTCCTCTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	126165576	126125589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126125601_126146077_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.10	chr7	-	3335	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	607.354877728005	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165539	126145626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156666_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.12	chr7	-	3174	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	-240	449	-240	-449	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTGTCTGCTCGCTGC	NA	False	NA	-1	True	ATTAAA	-25	NA	126165823	126146075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.15	chr7	-	2860	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-6	-456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	607.04599496249	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165536	126146082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162263_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.17	chr7	-	2858	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-10	-456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	606.976572859283	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165540	126146082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157832_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.2	chr7	-	175	1	Intergenic	novelGene_26167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	126125781	126125606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126125600_126125800
ES.31925.20	chr7	-	2845	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-10	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	605.29546504166	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165540	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163948_126165295_126165392_126165519
ES.31925.21	chr7	-	2907	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	9	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	601.57538804376	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165574	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165378_126165515
ES.31925.26	chr7	-	2899	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	23	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	601.57538804376	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165560	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165384_126165515
ES.31925.28	chr7	-	2897	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	18	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	786.036328676989	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165565	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146834_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165387_126165515
ES.31925.3	chr7	-	198	1	Intergenic	novelGene_26168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGATATGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	126133500	126133302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126133300_126133500
ES.31925.30	chr7	-	6961	20	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	17	-457	intron_retention	FALSE	canonical	3	1924	junction_13	284.796394200461	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165566	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.32	chr7	-	2907	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	7	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	606.088533136868	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165576	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162458_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.33	chr7	-	3102	19	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-10	-457	intron_retention	FALSE	canonical	3	1924	junction_13	261.377334731057	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165540	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
ES.31925.36	chr7	-	3922	3	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	15387	457	15180	-457	intron_retention	FALSE	canonical	3	2679	junction_1	101	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126150196	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126146253_126146356_126146520_126146606
ES.31925.37	chr7	-	2844	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-8	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	606.531606760934	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165538	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163624_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.38	chr7	-	2909	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	9	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	605.253095820253	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165574	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158169_126161729_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.4	chr7	-	2928	22	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	25	8667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	592.788238489606	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGCAAAACAACTCCAA	NA	False	NA	NA	False	NA	NA	NA	126165558	126136959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126136982_126146078_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.41	chr7	-	2891	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-11	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	600.546051523112	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165541	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146927_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.43	chr7	-	2891	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	25	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	783.607891422745	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165558	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156071_126156344_126156431_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.44	chr7	-	2993	20	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-10	-457	intron_retention	FALSE	canonical	0	0	junction_10	621.800294828009	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165540	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156666_126156855_126156998_126157806_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.46	chr7	-	2882	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-16	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	605.253095820253	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165546	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158178_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.47	chr7	-	2962	20	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-6	-457	intron_retention	FALSE	canonical	3	1924	junction_13	253.902570360083	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126165536	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126146253_126146356_126146520_126146606_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.48	chr7	-	2631	18	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	1606	-457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	634.142545620533	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTTGCTTGTTGTCTG	NA	False	NA	-9	True	ATTAAA	-17	NA	126163770	126146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146623_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587
ES.31925.5	chr7	-	3718	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	29	-364	-24	364	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTCAATTCCAGG	NA	False	NA	NA	False	NA	NA	NA	126165554	126145262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.50	chr7	-	6822	20	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-10	-458	intron_retention	FALSE	canonical	0	0	junction_9	622.951130349182	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATAGTTGCTTGTTGTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	126165540	126146084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126155680_126155881_126156073_126156344_126156439_126156543_126156666_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.53	chr7	-	2881	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	26	-458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	599.648436585972	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATAGTTGCTTGTTGTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	126165557	126146084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156055_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.56	chr7	-	3282	19	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-11	-459	intron_retention	FALSE	canonical	3	1924	junction_13	259.875284666024	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATAGTTGCTTGTTGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	126165541	126146085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
ES.31925.57	chr7	-	2890	21	NNC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-15	-459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	790.307716968524	1912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATAGTTGCTTGTTGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	126165545	126146085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162168_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165522
ES.31925.58	chr7	-	3022	16	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	7	4771	7	-4771	5prime_fragment	FALSE	canonical	3	1924	junction_9	230.932255578701	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGATTTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	126165576	126150397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.7	chr7	-	3387	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	-4	0	-4	0	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165587	126145626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ES.31925.8	chr7	-	11447	18	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	-24	0	intron_retention	FALSE	canonical	3	1924	junction_12	299.027987024996	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165554	126145626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163941_126165250_126165392_126165519
ES.31926.1	chr7	+	3757	4	FSM	ENSMUSG00000042759.13	ENSMUST00000039522.8	3685	4	-60	-12	-60	12	multi-exon	FALSE	canonical	2	5	junction_1	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGGGCTTTTAAATTA	NA	False	NA	NA	False	NA	NA	NA	126184053	126188296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126184241_126184547_126186984_126187068_126187335_126187428
ES.31927.1	chr7	-	2532	13	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	15	2	intron_retention	FALSE	canonical	3	116	junction_10	19.8088083662014	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTGCAGTCTCTGAA	NA	False	NA	0	True	AATAAA	-20	NA	126182383	126171255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180915_126181935_126182015_126182171
ES.31927.11	chr7	-	2033	17	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	317	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	49.8641905579545	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183075	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182273_126182474_126182797_126182917
ES.31927.12	chr7	-	3591	4	NNC	ENSMUSG00000030720.17	novel	1571	14	NA	NA	-988	0	intron_retention	TRUE	non_canonical	0	0	junction_2	73.631213188128	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	6376	False	NA	-2	True	AATAAA	-18	NA	126175247	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126173194_126173393_126174260_126174374
ES.31927.13	chr7	-	1787	14	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	116	junction_10	20.5253487382895	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182391	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
ES.31927.14	chr7	-	2032	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	53.2693098994405	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126184045	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182797_126183345_126183453_126183991
ES.31927.15	chr7	-	1701	15	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	45	junction_14	33.1860094691995	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182523	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474
ES.31927.17	chr7	-	3617	13	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-84	0	intron_retention	FALSE	canonical	1	2	junction_12	52.4220982877344	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183563	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174709_126176980_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182797_126183345
ES.31927.18	chr7	-	1587	14	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	44.295938611963	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182385	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126182171
ES.31927.19	chr7	-	1592	10	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	1430	0	intron_retention	FALSE	canonical	3	116	junction_8	22.4053565024081	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	767	False	NA	-2	True	AATAAA	-18	NA	126180856	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817
ES.31927.2	chr7	-	1858	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-89	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	50.8134521599864	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTGCAGTCTCTGA	NA	False	NA	-1	True	AATAAA	-19	NA	126184047	126171256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
ES.31927.20	chr7	-	2054	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	51.6486667309671	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183792	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183539
ES.31927.21	chr7	-	2257	15	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	14	0	intron_retention	FALSE	canonical	3	6	junction_12	41.4512868759641	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182384	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180629_126180817_126180915_126181935_126182015_126182171
ES.31927.23	chr7	-	1893	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	51.790301158785	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183982	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183890
ES.31927.24	chr7	-	1617	17	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	55.171182468749	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182511	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180597_126180629_126180817_126180915_126181935_126182015_126182171_126182269_126182474
ES.31927.27	chr7	-	2078	19	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	60.150043871786	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126183982	126171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183075_126183262_126183345_126183453_126183890
ES.31927.28	chr7	-	1822	15	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	4	junction_11	54.1300399453926	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182370	126171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180571_126180629_126180817_126180915_126181935_126182015_126182171
ES.31927.29	chr7	-	3712	13	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	116	junction_10	19.8088083662014	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182400	126171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180915_126181935_126182015_126182171
ES.31927.3	chr7	-	1634	17	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	4	junction_12	57.8008434194519	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182498	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180571_126180629_126180817_126180915_126181935_126182015_126182171_126182273_126182474
ES.31927.30	chr7	-	4211	11	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	16	-1	intron_retention	FALSE	canonical	3	116	junction_7	22.1506207587959	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182382	126171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
ES.31927.32	chr7	-	1848	13	NIC	ENSMUSG00000030720.17	novel	2386	15	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	116	junction_9	21.3403308836162	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTGTGCAGTCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	126182368	126171258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171
ES.31927.34	chr7	-	1923	17	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-72	-2	intron_retention	FALSE	canonical	3	8	junction_16	52.1578134127572	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTGTGCAGTCTC	NA	False	NA	-4	True	AATAAA	-16	NA	126184030	126171259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
ES.31927.36	chr7	-	1660	13	NIC	ENSMUSG00000030720.17	novel	1571	14	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	16	junction_10	41.6419926943411	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTCCTTTTTGTGCA	NA	False	NA	-9	True	AATAAA	-11	NA	126182373	126171264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
ES.31927.37	chr7	-	2870	4	Fusion	ENSMUSG00000030720.17_ENSMUSG00000098540.3	novel	506	5	NA	NA	15	12	intron_retention	FALSE	canonical	3	122	junction_1	15.5134350376268	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCAATCCCATGATCAT	NA	False	NA	NA	False	NA	NA	NA	126182347	126177518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126180037_126180817_126180915_126181935_126182015_126182171
ES.31927.38	chr7	-	4322	4	NIC	ENSMUSG00000030720.17	novel	1821	10	NA	NA	-4	-15	intron_retention	FALSE	canonical	3	21	junction_3	46.2625358386483	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	126183754	126177545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126179585_126179964_126180037_126180817_126182620_126183345
ES.31927.4	chr7	-	1507	15	NIC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	46.0197384448305	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182504	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171_126182269_126182474
ES.31927.5	chr7	-	2212	16	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-85	0	intron_retention	FALSE	non_canonical	0	0	junction_10	59.2270959011911	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126184043	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179398_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182620_126183345_126183453_126183991
ES.31927.6	chr7	-	1957	17	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	58.0758865085157	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183792	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182474_126182620_126183345_126183453_126183539
ES.31927.7	chr7	-	1671	13	NIC	ENSMUSG00000030720.17	novel	1571	14	NA	NA	13	0	intron_retention	FALSE	canonical	3	16	junction_10	41.3510546688016	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182385	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
ES.31927.8	chr7	-	1873	18	NNC	ENSMUSG00000030720.17	novel	3203	18	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	58.264995396733	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126184046	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174357_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126180037_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183991
ES.31927.9	chr7	-	1883	17	NNC	ENSMUSG00000030720.17	novel	2487	17	NA	NA	-98	0	intron_retention	FALSE	canonical	0	0	junction_10	66.7278755468807	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126183577	126171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180597_126180629_126180817_126180915_126181935_126182015_126182171_126182269_126182474_126182620_126183345_126183453_126183539
ES.31928.1	chr7	-	2582	1	Genic_Genomic	ENSMUSG00000030717.10	novel	NA	NA	NA	NA	-17	338	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126224664	126222082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126222100_126224700
ES.31928.3	chr7	-	2276	1	Genic_Genomic	ENSMUSG00000030717.10	novel	NA	NA	NA	NA	-45	4	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCGTGTGTTGTGTGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	126224692	126222416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126222400_126224700
ES.31928.4	chr7	-	797	3	FSM	ENSMUSG00000030717.10	ENSMUST00000187609.2	587	3	-14	-196	-14	3	multi-exon	FALSE	canonical	3	17	junction_2	1865.5	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTGTGTTGTGTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	126224661	126222417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126222752_126224061_126224358_126224494
ES.31928.5	chr7	-	742	3	FSM	ENSMUSG00000030717.10	ENSMUST00000191192.2	570	3	-143	-29	-12	0	multi-exon	FALSE	canonical	3	22	junction_2	1863	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126224659	126222420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126222752_126224061_126224308_126224494
ES.31928.7	chr7	-	1152	4	NIC	ENSMUSG00000030717.10	novel	829	3	NA	NA	-239	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	1740.47452022589	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126225427	126222420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126222752_126224061_126224206_126224494_126224585_126224840
ES.31928.9	chr7	-	1950	2	ISM	ENSMUSG00000030717.10	ENSMUST00000151105.8	524	3	526	-1696	-15	0	3prime_fragment	FALSE	canonical	3	3716	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTTTGGCGTGTGTTG	NA	False	NA	-11	True	AATAAA	-44	NA	126224662	126222423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126224206_126224494
ES.31929.1	chr7	+	231	1	Intergenic	novelGene_26169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGGGCTAACGTATCAA	NA	False	NA	NA	False	NA	NA	NA	126229525	126229756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126229500_126229800
ES.3193.1	chr10	-	174	1	Intergenic	novelGene_2506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGAAAGAAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	77420690	77420516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77420500_77420700
ES.31930.1	chr7	+	1591	13	NNC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	-14546	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.575161656702	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	NA	False	NA	32	True	AATAAA	-15	NA	126233934	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126233956_126234223_126234358_126248298_126248650_126260223_126260321_126261734_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.10	chr7	+	4252	7	NIC	ENSMUSG00000030714.15	novel	777	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	419	junction_2	34.1255850580698	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	121	False	NA	32	True	AATAAA	-15	NA	126248490	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126263177_126264087_126264161_126269801_126269867_126270709_126271053_126271209_126271246_126271327
ES.31930.11	chr7	+	1221	9	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	419	junction_3	33.7518518010494	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	121	False	NA	32	True	AATAAA	-15	NA	126248490	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.2	chr7	+	183	1	Intergenic	novelGene_26171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	126243768	126243951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126243800_126244000
ES.31930.3	chr7	+	1192	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	-27	147	-27	-1	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	84	False	NA	32	True	AATAAA	-15	NA	126248453	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.4	chr7	+	1013	8	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	162.185960287214	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	114	False	NA	32	True	AATAAA	-15	NA	126248483	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126260321_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.5	chr7	+	4086	7	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	419	junction_2	37.0300178533878	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	118	False	NA	32	True	AATAAA	-15	NA	126248487	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126263177_126264087_126264161_126269801_126269867_126270709_126271053_126271209_126271491_126271741
ES.31930.6	chr7	+	3938	9	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	4	-1	intron_retention	FALSE	canonical	3	419	junction_2	32.6879182573623	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTCCTGGGCCTCA	118	False	NA	32	True	AATAAA	-15	NA	126248487	126271950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.7	chr7	+	3587	4	ISM	ENSMUSG00000030714.15	ENSMUST00000152231.8	786	6	-30	3713	5	-2520	5prime_fragment	FALSE	canonical	3	419	junction_3	27.3617738216415	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCACAGTGGAGTTAG	119	False	NA	NA	False	AAGAAA	-12	NA	126248488	126267340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087
ES.31930.8	chr7	+	3931	9	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_5	154.817584191848	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	119	False	NA	33	True	AATAAA	-16	NA	126248488	126271951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126248650_126260223_126263177_126264087_126264161_126269801_126269867_126270709_126270833_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ES.31930.9	chr7	+	1147	10	NNC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	149.919072819511	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCATGTCTCCTGGGCCT	121	False	NA	30	True	AATAAA	-13	NA	126248490	126271948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271485_126271741
ES.31931.1	chr7	-	179	1	Intergenic	novelGene_26170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	126242549	126242370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126242400_126242500
ES.31932.1	chr7	-	658	1	FSM	ENSMUSG00000066175.3	ENSMUST00000084587.2	348	1	-1	-309	-1	309	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACATTTAGCTACATCT	NA	False	NA	NA	False	AATAAA	-13	NA	126248743	126248085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126248100_126248700
ES.31933.1	chr7	+	3215	1	Antisense	novelGene_ENSMUSG00000059772.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCCCGCCTCTGTCACT	NA	False	NA	NA	False	NA	NA	NA	126291298	126294513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126291300_126294500
ES.31933.2	chr7	+	162	1	Intergenic	novelGene_26172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATAATTCTTAA	838	False	NA	NA	False	NA	NA	NA	126293318	126293480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126293300_126293500
ES.31933.3	chr7	+	193	1	Intergenic	novelGene_26173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGTAACCCTAA	165	False	NA	21	True	NA	NA	NA	126293989	126294182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126294000_126294200
ES.31934.1	chr7	+	1327	1	FSM	ENSMUSG00000047721.9	ENSMUST00000206275.2	3796	1	-636	3105	-34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	542	False	NA	18	True	ATTAAA	-13	NA	126294538	126295865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126294500_126295900
ES.31934.2	chr7	+	418	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	486	362	-44	-1	multi-exon	FALSE	canonical	3	2284	junction_2	148	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTCTCAGTGTGCTGT	1097	False	NA	21	True	ATTAAA	-16	NA	126295093	126295868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126295272_126295354_126295453_126295726
ES.31934.3	chr7	+	3514	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	492	-2740	-38	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCGTCTTATTCACCAT	1103	False	NA	NA	False	AATAAA	-12	NA	126295099	126298970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126295272_126295354_126295453_126295726
ES.31934.7	chr7	+	640	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	-5	7	2	3	multi-exon	FALSE	canonical	3	2580	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCAGCTGGTCTCAGTG	1143	False	NA	15	True	ATTAAA	-10	NA	126295139	126295862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126295272_126295354
ES.31934.8	chr7	+	261	2	NIC	ENSMUSG00000047721.9	novel	1266	3	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	66	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGGTCTCAGTGTGCT	1154	False	NA	19	True	ATTAAA	-14	NA	126295150	126295866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126295272_126295726
ES.31935.1	chr7	-	2433	3	NIC	ENSMUSG00000059772.13	novel	2062	5	NA	NA	-29	10	intron_retention	FALSE	canonical	3	82	junction_1	3	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGCCGGGCGTGGTGG	4958	False	NA	NA	False	ATTAAA	-8	NA	126294985	126289839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126291832_126291924_126291977_126294596
ES.31935.10	chr7	-	1993	5	FSM	ENSMUSG00000059772.13	ENSMUST00000155012.3	1567	5	-9	-417	-9	-23	multi-exon	FALSE	canonical	3	82	junction_3	8.78919791562347	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	5017	False	NA	NA	False	NA	NA	NA	126294926	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126290828_126290910_126291228_126291492_126291832_126291924_126291977_126294596
ES.31935.11	chr7	-	1853	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-46	-417	14	-23	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	5001	False	NA	NA	False	NA	NA	NA	126294942	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
ES.31935.12	chr7	-	2248	4	NIC	ENSMUSG00000059772.13	novel	2062	5	NA	NA	1	-23	intron_retention	FALSE	canonical	3	82	junction_2	7.93025150224688	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	5027	False	NA	NA	False	NA	NA	NA	126294916	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126290828_126290910_126291832_126291924_126291977_126294596
ES.31935.13	chr7	-	1457	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	26	1669	-13	-19	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGATGTGCCCACAGGCA	5013	False	NA	NA	False	NA	NA	NA	126294930	126290308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
ES.31935.2	chr7	-	3917	3	ISM	ENSMUSG00000059772.13	ENSMUST00000084586.9	2062	5	868	-10	868	10	intron_retention	FALSE	canonical	3	97	junction_2	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGCCGGGCGTGGTGG	6000	False	NA	NA	False	ATTAAA	-8	NA	126293943	126289839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126290828_126290910_126290996_126291099
ES.31935.3	chr7	-	1941	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	1	1210	1	0	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	4988	False	NA	NA	False	NA	NA	NA	126294955	126289849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
ES.31935.4	chr7	-	1949	4	NIC	ENSMUSG00000059772.13	novel	1567	5	NA	NA	-17	-23	intron_retention	FALSE	canonical	3	27	junction_3	35.3647658929996	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	5009	False	NA	NA	False	NA	NA	NA	126294934	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126290828_126290910_126291228_126291492_126291832_126294596
ES.31935.7	chr7	-	4952	3	NIC	ENSMUSG00000059772.13	novel	2062	5	NA	NA	-44	-23	intron_retention	FALSE	canonical	3	82	junction_2	9.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	4943	False	NA	NA	False	NA	NA	NA	126295000	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126290828_126290910_126291832_126291924
ES.31935.8	chr7	-	1591	3	NIC	ENSMUSG00000059772.13	novel	1390	5	NA	NA	2979	-23	intron_retention	FALSE	canonical	3	97	junction_1	3	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	8111	False	NA	NA	False	NA	NA	NA	126291832	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126290996_126291099_126291228_126291492
ES.31935.9	chr7	-	1813	6	NNC	ENSMUSG00000059772.13	novel	3152	6	NA	NA	37	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.3983956875158	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATAAAGTTAA	5084	False	NA	NA	False	NA	NA	NA	126294859	126289872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126290828_126290910_126290996_126291099_126291219_126291492_126291832_126291924_126291977_126294596
ES.31936.1	chr7	-	846	5	ISM	ENSMUSG00000030707.16	ENSMUST00000106364.8	1747	11	3013	3	20	-3	3prime_fragment	FALSE	canonical	3	11	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCTCAGACTCCGGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	126300379	126298947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163
ES.31937.1	chr7	+	203	1	Intergenic	novelGene_26174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATATTAATCCTACCTAT	1496	False	NA	NA	False	NA	NA	NA	126325468	126325671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126325500_126325700
ES.31938.1	chr7	-	209	1	Intergenic	novelGene_26175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAGAAAGAAAA	9672	False	NA	NA	False	NA	NA	NA	126336032	126335823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126335800_126336000
ES.31939.1	chr7	-	175	1	Intergenic	novelGene_26176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTGA	8880	False	NA	NA	False	NA	NA	NA	126336824	126336649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126336600_126336800
ES.3194.1	chr10	-	2109	2	Intergenic	novelGene_2507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTTGTCTTGGCCTC	NA	False	NA	NA	False	NA	NA	NA	77441072	77438868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77439561_77439655
ES.31940.1	chr7	-	175	1	Intergenic	novelGene_26177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGGAAGG	8351	False	NA	NA	False	NA	NA	NA	126343252	126343077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126343100_126343300
ES.31941.1	chr7	+	198	1	Intergenic	novelGene_26178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAAGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	126347309	126347507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126347300_126347500
ES.31942.1	chr7	-	199	1	Intergenic	novelGene_26179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTATATGTATGAGAA	6369	False	NA	NA	False	NA	NA	NA	126349592	126349393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126349400_126349600
ES.31943.1	chr7	+	1890	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	-91	1	-91	-1	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTCTGTCTGTGTA	5125	False	NA	30	True	TATAAA	-23	NA	126358681	126364990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ES.31943.2	chr7	+	5044	4	NIC	ENSMUSG00000063065.14	novel	1005	7	NA	NA	6	-5	intron_retention	FALSE	canonical	3	217	junction_1	11.1455023315337	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGCCTGCCTCTGTCTG	5222	False	NA	26	True	TATAAA	-19	NA	126358778	126364986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126358991_126359902_126362397_126362569_126363816_126363894
ES.31943.3	chr7	+	3893	8	NIC	ENSMUSG00000063065.14	novel	1800	9	NA	NA	23	-5	intron_retention	FALSE	canonical	3	189	junction_4	17.4309131916225	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGAGCCTGCCTCTGTCTG	5239	False	NA	26	True	TATAAA	-19	NA	126358795	126364986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126358991_126359902_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ES.31943.4	chr7	+	1410	10	NNC	ENSMUSG00000063065.14	novel	1800	9	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	69.7404358680223	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGCCTGCCTCTGTCTGT	5240	False	NA	27	True	TATAAA	-20	NA	126358796	126364987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411_126364568_126364929
ES.31944.1	chr7	+	1137	10	FSM	ENSMUSG00000030703.9	ENSMUST00000032944.9	1148	10	9	2	9	-2	multi-exon	TRUE	canonical	1	3	junction_3	2.43938871112224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTTCATGGAACAAG	NA	False	NA	10	True	AATAAA	-16	NA	126365514	126374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126365782_126366073_126366117_126366346_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
ES.31944.2	chr7	+	1325	9	NIC	ENSMUSG00000030703.9	novel	1148	10	NA	NA	51	-2	intron_retention	FALSE	canonical	1	3	junction_2	2.58602010819715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTTCATGGAACAAG	NA	False	NA	10	True	AATAAA	-16	NA	126365556	126374815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126365782_126366073_126366483_126366562_126366609_126366738_126366858_126366934_126367025_126367741_126367876_126370159_126370220_126370333_126370386_126374625
ES.31945.1	chr7	-	175	1	Intergenic	novelGene_26180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGTCCAAGGTCCA	6218	False	NA	NA	False	NA	NA	NA	126371776	126371601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126371600_126371800
ES.31946.1	chr7	+	3247	3	ISM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	-46	5	0	-2	intron_retention	FALSE	canonical	3	187	junction_1	6	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCCCCTGGCTCACAT	8221	False	NA	12	True	AATAAA	-13	NA	126376126	126379681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126377126_126377225_126377270_126377477
ES.31946.2	chr7	+	967	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	8	-2	8	2	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGCTCACATGGAATAC	8229	False	NA	19	True	AATAAA	-20	NA	126376134	126379688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ES.31946.3	chr7	+	1833	3	NIC	ENSMUSG00000042675.16	novel	1594	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	187	junction_1	16.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCCCCTGGCTCACAT	8231	False	NA	12	True	AATAAA	-13	NA	126376136	126379681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126377126_126377225_126377587_126379198
ES.31946.4	chr7	+	1161	4	NIC	ENSMUSG00000042675.16	novel	973	5	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	187	junction_2	14.7044966667419	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACAGCCCCTGGCTCAC	8234	False	NA	10	True	AATAAA	-11	NA	126376139	126379679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126376276_126376942_126377126_126377225_126377587_126379198
ES.31946.5	chr7	+	1626	4	FSM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	-33	1	-7	0	multi-exon	FALSE	canonical	3	187	junction_1	13.6381816969859	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTGGCTCACATGGAA	8234	False	NA	16	True	AATAAA	-17	NA	126376139	126379685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126377126_126377225_126377270_126377477_126377587_126379198
ES.31946.6	chr7	+	3724	11	Fusion	ENSMUSG00000042675.16_ENSMUSG00000030699.17	novel	1727	8	NA	NA	-1	-14	intron_retention	FALSE	canonical	0	0	junction_5	97.6211554940834	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTCAGGAAACTTGAG	8243	False	NA	NA	False	AATAAA	-14	NA	126376148	126384718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198_126380797_126380884_126381120_126382016_126382524_126382601_126382673_126383708_126383783_126383863_126384048_126384126
ES.31946.7	chr7	+	887	4	NIC	ENSMUSG00000042675.16	novel	973	5	NA	NA	-10	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	89.6449787897918	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACAGCCCCTGGCTCA	8255	False	NA	9	True	AATAAA	-10	NA	126376160	126379678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126376276_126376942_126377126_126377477_126377587_126379198
ES.31946.8	chr7	+	2515	7	NIC	ENSMUSG00000030699.17	novel	1727	8	NA	NA	-718	-18	intron_retention	FALSE	canonical	0	0	junction_4	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGTGCTCAGGAAACT	NA	False	NA	NA	False	AATAAA	-10	NA	126379936	126384714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126381120_126382016_126382285_126382376_126382524_126382601_126382673_126383708_126383783_126383863_126384048_126384126
ES.31947.1	chr7	+	175	1	Antisense	novelGene_ENSMUSG00000030697.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGTGTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	126390425	126390600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126390400_126390600
ES.31948.1	chr7	-	1595	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	165	-360	-28	358	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAAATTGGCATGGCT	5391	False	NA	NA	False	NA	NA	NA	126391347	126384679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ES.31948.15	chr7	-	1384	9	NIC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-5	-37	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	867.36281336013	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5065	False	NA	NA	False	GATAAA	-11	NA	126391673	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388307_126391232_126391396_126391594
ES.31948.16	chr7	-	1372	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-69	-37	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	860.321079234375	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5001	False	NA	NA	False	GATAAA	-11	NA	126391737	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385447_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.17	chr7	-	1593	7	NIC	ENSMUSG00000030697.8	novel	1400	8	NA	NA	3	-37	intron_retention	FALSE	canonical	3	2469	junction_6	137.311891530033	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5076	False	NA	NA	False	GATAAA	-11	NA	126391662	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ES.31948.18	chr7	-	1730	8	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-6	-37	at_least_one_novel_splicesite	FALSE	canonical	3	343	junction_4	768.695316621559	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5064	False	NA	NA	False	GATAAA	-11	NA	126391674	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126387289_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.19	chr7	-	1342	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	19	-37	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	836.322904146479	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5119	False	NA	NA	False	GATAAA	-11	NA	126391619	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391523
ES.31948.2	chr7	-	4933	7	NIC	ENSMUSG00000030697.8	novel	881	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	1828	junction_6	315.440652984924	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTCTGTCAGGTTTGA	5071	False	NA	NA	False	AATAAA	-16	NA	126391667	126385036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126391396_126391594
ES.31948.20	chr7	-	5057	5	NIC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-1	-37	intron_retention	FALSE	canonical	3	1828	junction_4	335.881210400344	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5069	False	NA	NA	False	GATAAA	-11	NA	126391669	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385734_126386391_126386519_126386608_126387607_126388195_126391396_126391594
ES.31948.21	chr7	-	1170	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	1	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	867.527629243011	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5071	False	NA	NA	False	GATAAA	-11	NA	126391667	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386634_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.22	chr7	-	1408	8	NNC	ENSMUSG00000030697.8	novel	1400	8	NA	NA	-66	-37	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	909.074882975623	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5353	False	NA	NA	False	GATAAA	-11	NA	126391385	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387116_126387391_126387555_126387607_126388195_126388248_126391232
ES.31948.23	chr7	-	1298	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-17	-37	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	861.65901028191	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5053	False	NA	NA	False	GATAAA	-11	NA	126391685	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386480_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.24	chr7	-	2140	8	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	0	-37	intron_retention	FALSE	canonical	2	9	junction_6	1134.991971562	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5070	False	NA	NA	False	GATAAA	-11	NA	126391668	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387116_126387391_126387555_126388307_126391232_126391396_126391594
ES.31948.25	chr7	-	1476	8	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-6	-37	intron_retention	FALSE	canonical	3	23	junction_3	1042.95373329593	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5064	False	NA	NA	False	GATAAA	-11	NA	126391674	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385734_126386391_126386519_126386608_126386783_126387116_126387289_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.29	chr7	-	1168	7	NIC	ENSMUSG00000030697.8	novel	1400	8	NA	NA	93	-37	combination_of_known_splicesites	FALSE	canonical	3	343	junction_4	820.290480392295	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5319	False	NA	NA	False	GATAAA	-11	NA	126391419	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387555_126387607_126388195_126388248_126391232
ES.31948.3	chr7	-	4573	7	ISM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-33	3	-33	-1	intron_retention	FALSE	canonical	3	2424	junction_1	145.604964048468	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTAGGTTCTGTCAGGT	5037	False	NA	NA	False	AATAAA	-12	NA	126391701	126385040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195
ES.31948.30	chr7	-	1289	7	ISM	ENSMUSG00000030697.8	ENSMUST00000205935.2	881	8	175	-384	22	-37	3prime_fragment	FALSE	canonical	1	1	junction_6	973.075308265273	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5248	False	NA	NA	False	GATAAA	-11	NA	126391490	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126391232
ES.31948.33	chr7	-	1359	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-35	-39	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	863.433760849667	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAGAAAAAAATTC	5035	False	NA	NA	False	GATAAA	-9	NA	126391703	126385078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391588
ES.31948.34	chr7	-	2018	1	FSM	ENSMUSG00000030697.8	ENSMUST00000205862.2	1984	1	-23	-11	-23	11	mono-exon	FALSE	NA	NA	NA	NA	NA	778	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGACCTTGAAAGATACA	5047	False	NA	NA	False	NA	NA	NA	126391691	126389673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126389700_126391700
ES.31948.4	chr7	-	1438	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	-99	20	-99	-18	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAGAAAAATAGA	4971	False	NA	NA	False	GATAAA	-30	NA	126391767	126385057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.5	chr7	-	1802	8	NIC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-5	-36	intron_retention	FALSE	canonical	3	1828	junction_7	301.309726063412	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAATTCTAA	5095	False	NA	NA	False	GATAAA	-12	NA	126391643	126385075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ES.31948.6	chr7	-	1543	8	NNC	ENSMUSG00000030697.8	novel	1400	8	NA	NA	16	-37	intron_retention	FALSE	canonical	3	23	junction_4	1067.73336119663	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5116	False	NA	NA	False	GATAAA	-11	NA	126391622	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387116_126387289_126387555_126387607_126388195_126388248_126391232
ES.31948.8	chr7	-	4659	7	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	-17	-37	intron_retention	FALSE	canonical	3	23	junction_4	929.015368847876	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAAAATTCTA	5053	False	NA	NA	False	GATAAA	-11	NA	126391685	126385076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387116_126387607_126388195_126391396_126391594
ES.31949.1	chr7	+	2432	11	FSM	ENSMUSG00000052301.15	ENSMUST00000064110.14	2538	11	105	1	20	-1	multi-exon	FALSE	canonical	1	1	junction_1	8.4829240241794	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTTGAGTTTGCTGG	776	False	NA	3	True	AATAAA	-14	NA	126446829	126451876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126447205_126447586_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ES.31949.2	chr7	+	2311	12	NNC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	-15	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	8.42467842778407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGCTTGAGTTTGCT	801	False	NA	1	True	AATAAA	-12	NA	126446854	126451874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126447205_126447586_126447865_126447958_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ES.31949.3	chr7	+	2402	11	NNC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	-13	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	8.82269800004511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGCTTGAGTTTGCTG	803	False	NA	2	True	AATAAA	-13	NA	126446856	126451875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126447205_126447586_126447865_126447956_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450791_126450880_126450978_126451062
ES.31949.4	chr7	+	2113	11	NIC	ENSMUSG00000052301.15	novel	2538	11	NA	NA	-9	9	intron_retention	FALSE	canonical	0	0	junction_1	8.57263086805911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTGGCACAGGAGGA	835	False	NA	13	True	AATAAA	-24	NA	126446888	126451886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126446935_126447586_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ES.3195.1	chr10	+	1782	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	-45	893	-45	16	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTGTATTTGGAGACG	NA	False	NA	41	True	AGTAAA	-34	NA	77441885	77453272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ES.3195.11	chr10	+	2500	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	130	0	2	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCACAGAGTAAACATG	NA	False	NA	NA	False	NA	NA	NA	77442060	77454165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ES.3195.13	chr10	+	3243	4	NNC	ENSMUSG00000020265.17	novel	2630	4	NA	NA	17	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	657.137901982698	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTCTTGGCCTATG	NA	False	NA	19	True	AGTAAA	-12	NA	77442075	77453250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77442176_77445645_77445777_77449813_77451053_77451477
ES.3195.14	chr10	+	2189	8	NIC	ENSMUSG00000112241.2	novel	512	6	NA	NA	48	4452	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	535.279480691143	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	NA	False	NA	7	True	AATAAA	-20	NA	77442078	77481829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ES.3195.15	chr10	+	1881	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	-9	2	-9	-2	multi-exon	FALSE	canonical	3	41	junction_1	598.245397437837	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTGGCCTATGTTAA	NA	False	NA	23	True	AGTAAA	-16	NA	77442395	77453254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
ES.3195.16	chr10	+	1931	5	NIC	ENSMUSG00000020265.17	novel	1874	4	NA	NA	45	-6	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	587.132172087342	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTCTTGGCCTATG	NA	False	NA	19	True	AGTAAA	-12	NA	77442449	77453250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77442803_77445645_77445775_77449813_77449886_77451760_77451869_77451981
ES.3195.17	chr10	+	1639	4	NNC	ENSMUSG00000020265.17	novel	1874	4	NA	NA	72	-7	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	609.405356793726	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTCTCTTGGCCTAT	NA	False	NA	18	True	AGTAAA	-11	NA	77442476	77453249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77442647_77445645_77445775_77449813_77449886_77451981
ES.3195.18	chr10	+	2147	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	-114	-2	-114	2	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	8907	False	NA	7	True	AATAAA	-20	NA	77457994	77481829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ES.3195.19	chr10	+	2009	6	NNC	ENSMUSG00000009293.18	novel	2031	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	121.314467397751	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACAGTGTTGTGTGGTGC	125	False	NA	2	True	AATAAA	-15	NA	77458143	77481824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480264
ES.3195.2	chr10	+	1774	4	FSM	ENSMUSG00000020265.17	ENSMUST00000129492.8	487	4	-170	-1117	-42	2	multi-exon	FALSE	canonical	3	43	junction_1	597.315661940987	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77441888	77453258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442185_77445645_77445775_77449813_77449886_77451981
ES.3195.20	chr10	+	2106	7	NIC	ENSMUSG00000009293.18	novel	2031	6	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	140.939407784575	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	143	False	NA	7	True	AATAAA	-20	NA	77458161	77481829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77458251_77466559_77466596_77466682_77466729_77470493_77470620_77477293_77477413_77479302_77479444_77480280
ES.3195.21	chr10	+	1935	6	NNC	ENSMUSG00000009293.18	novel	2031	6	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	118.435467660663	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTGTGGTGCTCACT	143	False	NA	7	True	AATAAA	-20	NA	77458161	77481829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479347_77479444_77480280
ES.3195.22	chr10	+	1226	1	NIC	ENSMUSG00000009293.18	novel	2031	6	NA	NA	11	-17941	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAAGGTTTGTCCTCTGT	149	False	NA	NA	False	AATAAA	-33	NA	77458167	77459393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77458200_77459400
ES.3195.23	chr10	+	206	1	Intergenic	novelGene_2510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGCAGGTGCTCTTGAC	9645	False	NA	NA	False	NA	NA	NA	77467663	77467869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77467700_77467900
ES.3195.24	chr10	+	2968	3	FSM	ENSMUSG00000009293.18	ENSMUST00000173360.2	596	3	-886	-1486	-886	1	multi-exon	FALSE	canonical	3	276	junction_2	11	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTGTGGTGCTCAC	NA	False	NA	6	True	AATAAA	-19	NA	77476133	77481828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77477413_77479302_77479444_77480280
ES.3195.3	chr10	+	1725	5	FSM	ENSMUSG00000020265.17	ENSMUST00000137841.9	1005	5	-6	-714	-6	2	multi-exon	FALSE	canonical	3	61	junction_3	668.550858200033	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCCTATGTTAAACAC	NA	False	NA	27	True	AGTAAA	-20	NA	77442036	77453258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451760_77451869_77451981
ES.3195.5	chr10	+	891	4	FSM	ENSMUSG00000020265.17	ENSMUST00000129492.8	487	4	-4	-400	-4	-3	multi-exon	FALSE	canonical	3	43	junction_1	597.315661940987	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGCTTTGTCAAAC	NA	False	NA	2	True	ATTAAA	-17	NA	77442054	77452541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442185_77445645_77445775_77449813_77449886_77451981
ES.3195.6	chr10	+	882	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	124	1624	-4	-3	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGCTTTGTCAAAC	NA	False	NA	2	True	ATTAAA	-17	NA	77442054	77452541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ES.3195.7	chr10	+	1315	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	1187	0	246	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGGTTCCGCATTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	77442058	77452978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ES.3195.8	chr10	+	1610	4	NNC	ENSMUSG00000020265.17	novel	2630	4	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	661.90230900539	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCTTGGCCTATGTT	NA	False	NA	21	True	AGTAAA	-14	NA	77442060	77453252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77442176_77445645_77445775_77449813_77449886_77451958
ES.3195.9	chr10	+	1517	3	NIC	ENSMUSG00000020265.17	novel	2630	4	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	692	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTGGCCTATGTTAA	NA	False	NA	23	True	AGTAAA	-16	NA	77442060	77453254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77442176_77445645_77445775_77451981
ES.31950.1	chr7	+	2855	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-772	219	intron_retention	FALSE	canonical	0	0	junction_1	87.8049787068722	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTCATGCCCTGTCTG	704	False	NA	61	True	AATAAA	-35	NA	126460371	126464309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126460486_126460928_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.10	chr7	+	2556	3	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-23	208	intron_retention	FALSE	canonical	3	203	junction_1	31.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1920	False	NA	50	True	AATAAA	-24	NA	126461587	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126463834_126463905
ES.31950.11	chr7	+	2314	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	453	-1	-14	1	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTCTCAGGCTCAGTT	1929	False	NA	9	True	NA	NA	NA	126461596	126464550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.12	chr7	+	2016	7	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-2	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.7899725123332	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCAAATTGGTCCCAAA	1941	False	NA	44	True	AATAAA	-18	NA	126461608	126464292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461799_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.13	chr7	+	2525	3	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-1	204	intron_retention	FALSE	canonical	3	203	junction_1	36	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATTGGTCCCAAACC	1942	False	NA	46	True	AATAAA	-20	NA	126461609	126464294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126463658_126463734
ES.31950.14	chr7	+	2288	4	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-1	204	intron_retention	FALSE	canonical	3	200	junction_2	30.4302481094059	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATTGGTCCCAAACC	1942	False	NA	46	True	AATAAA	-20	NA	126461609	126464294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126462099_126462340_126463834_126463905
ES.31950.15	chr7	+	2399	5	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-1	219	intron_retention	FALSE	canonical	3	203	junction_1	28.0122740954746	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTCATGCCCTGTCTG	1942	False	NA	61	True	AATAAA	-35	NA	126461609	126464309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.16	chr7	+	2370	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-1	1	intron_retention	FALSE	canonical	3	171	junction_2	40.4623281584241	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTCTCAGGCTCAGTT	1942	False	NA	9	True	NA	NA	NA	126461609	126464550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463658_126463734_126463834_126463905
ES.31950.17	chr7	+	1981	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-1	208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.8049787068722	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1942	False	NA	50	True	AATAAA	-24	NA	126461609	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126462638_126462705_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.18	chr7	+	2194	5	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	208	intron_retention	FALSE	canonical	3	171	junction_2	34.662660024874	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1943	False	NA	50	True	AATAAA	-24	NA	126461610	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463834_126463905
ES.31950.19	chr7	+	1724	9	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	104.631496214094	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCCAAATTGGTCCC	1943	False	NA	41	True	AATAAA	-15	NA	126461610	126464289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126462635_126462710_126462824_126463062_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.2	chr7	+	2729	5	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-48	208	intron_retention	FALSE	canonical	3	200	junction_2	34.662660024874	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1428	False	NA	50	True	AATAAA	-24	NA	126461095	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126462099_126462340_126463658_126463734_126463834_126463905
ES.31950.20	chr7	+	2637	5	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	-1	intron_retention	FALSE	canonical	3	203	junction_1	28.0122740954746	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACTCTCAGGCTCAG	1943	False	NA	7	True	NA	NA	NA	126461610	126464548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.21	chr7	+	2117	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	208	intron_retention	FALSE	canonical	3	171	junction_2	40.4623281584241	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1943	False	NA	50	True	AATAAA	-24	NA	126461610	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463658_126463734_126463834_126463905
ES.31950.22	chr7	+	2464	4	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	208	intron_retention	FALSE	canonical	3	203	junction_1	27.8208554864871	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1943	False	NA	50	True	AATAAA	-24	NA	126461610	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126463423_126463491_126463834_126463905
ES.31950.23	chr7	+	1967	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.8049787068722	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGGTCCCAAACCGT	1943	False	NA	48	True	AATAAA	-22	NA	126461610	126464296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126462896_126462974_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.24	chr7	+	2613	2	FSM	ENSMUSG00000042606.10	ENSMUST00000146120.2	431	2	-1974	-208	3	208	multi-exon	FALSE	canonical	3	266	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1946	False	NA	50	True	AATAAA	-24	NA	126461613	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126463834_126463905
ES.31950.25	chr7	+	1402	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	5	199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.8049787068722	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCCAAATTGGTCCC	1948	False	NA	41	True	AATAAA	-15	NA	126461615	126464289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126462416_126463047_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.26	chr7	+	2390	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	200	junction_2	32.121021154378	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTCTCAGGCTCAGT	1949	False	NA	8	True	NA	NA	NA	126461616	126464549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.27	chr7	+	1920	4	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	129	208	intron_retention	FALSE	canonical	3	8	junction_1	123.798222927472	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	2114	False	NA	50	True	AATAAA	-24	NA	126461781	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461893_126462340_126463658_126463734_126463834_126463905
ES.31950.28	chr7	+	1822	7	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	167	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	94.7899725123332	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCAAATTGGTCCCAAA	2152	False	NA	44	True	AATAAA	-18	NA	126461819	126464292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461893_126461989_126462099_126462340_126462874_126462967_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.29	chr7	+	1657	2	FSM	ENSMUSG00000042606.10	ENSMUST00000146120.2	431	2	-762	-464	-189	5	multi-exon	FALSE	canonical	3	266	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCAGGCTCAGTTCATC	3158	False	NA	13	True	NA	NA	NA	126462825	126464554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126463834_126463905
ES.31950.3	chr7	+	3190	1	FSM	ENSMUSG00000042606.10	ENSMUST00000205512.2	966	1	-499	-1725	-32	211	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCAAACCGTCATGC	1444	False	NA	53	True	AATAAA	-27	NA	126461111	126464301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126461100_126464300
ES.31950.30	chr7	+	1137	5	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-128	206	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	115.357054400674	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGGTCCCAAACCGT	3219	False	NA	48	True	AATAAA	-22	NA	126462886	126464296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126462974_126463028_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.4	chr7	+	2599	6	ISM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	-17	256	-17	203	intron_retention	FALSE	canonical	3	171	junction_2	38.6698849235422	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCAAATTGGTCCCAAAC	1459	False	NA	45	True	AATAAA	-19	NA	126461126	126464293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734
ES.31950.5	chr7	+	2276	8	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-16	202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.8049787068722	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCAAATTGGTCCCAAA	1460	False	NA	44	True	AATAAA	-18	NA	126461127	126464292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461161_126461409_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.6	chr7	+	2614	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	-16	208	intron_retention	FALSE	canonical	3	171	junction_1	40.8871617992739	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1460	False	NA	50	True	AATAAA	-24	NA	126461127	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.7	chr7	+	3075	2	ISM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	-3	251	-3	208	intron_retention	FALSE	canonical	3	203	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1473	False	NA	50	True	AATAAA	-24	NA	126461140	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126461689_126461771
ES.31950.8	chr7	+	2603	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	9	208	intron_retention	FALSE	canonical	3	200	junction_2	32.121021154378	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGTCCCAAACCGTCA	1485	False	NA	50	True	AATAAA	-24	NA	126461152	126464298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126461689_126461771_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ES.31950.9	chr7	+	2513	7	NNC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	17	202	intron_retention	FALSE	non_canonical	0	0	junction_3	94.1973401370171	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCCAAATTGGTCCCAAA	1493	False	NA	44	True	AATAAA	-18	NA	126461160	126464292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126461689_126461771_126462099_126462340_126462635_126462710_126463423_126463491_126463658_126463734_126463834_126463905
ES.31951.1	chr7	-	3072	2	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	2863	-2127	1473	2125	intron_retention	FALSE	canonical	3	21188	junction_1	0	5351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCCTCCGTGTTTTCT	1288	False	NA	NA	False	NA	NA	NA	126395450	126392280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126394687_126394784
ES.31951.100	chr7	-	1494	9	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_8	362.098894468072	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9923	False	NA	-4	True	ATTAAA	-15	NA	126461543	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31951.101	chr7	-	5379	6	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	799	junction_1	72.674617302054	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9174	False	NA	-4	True	ATTAAA	-15	NA	126461030	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.102	chr7	-	5672	5	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	847	junction_2	56.7626637852735	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9214	False	NA	-4	True	ATTAAA	-15	NA	126460990	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.103	chr7	-	1471	7	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	342.639590369953	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9189	False	NA	-4	True	ATTAAA	-15	NA	126461015	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126452505_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.104	chr7	-	1440	9	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	400.087158473001	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9926	False	NA	-4	True	ATTAAA	-15	NA	126461540	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126452660_126452753_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31951.105	chr7	-	1107	8	NIC	ENSMUSG00000030689.16	novel	1840	7	NA	NA	17	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	385.705185077824	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9317	False	NA	-5	True	ATTAAA	-14	NA	126460887	126451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ES.31951.106	chr7	-	1452	6	ISM	ENSMUSG00000030689.16	ENSMUST00000125624.8	1741	7	544	1	5	-1	3prime_fragment	FALSE	canonical	3	695	junction_1	106.482674647099	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9199	False	NA	-5	True	ATTAAA	-14	NA	126461005	126451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126452164_126456397_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.107	chr7	-	1034	6	FSM	ENSMUSG00000030689.16	ENSMUST00000206349.2	883	6	-5	-146	4	-1	multi-exon	FALSE	canonical	1	10	junction_1	371.089423185302	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGTCCTTTCCTCT	9167	False	NA	-5	True	ATTAAA	-14	NA	126461037	126451605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126452164_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.109	chr7	-	1513	9	NNC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	396.842045875938	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCCTTGTCCTTTCCTC	9915	False	NA	-6	True	ATTAAA	-13	NA	126461551	126451606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126452164_126452660_126452766_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31951.11	chr7	-	3714	3	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-42	-1	-13	0	intron_retention	FALSE	canonical	3	20410	junction_2	389	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398355	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126394687_126394784_126394985_126395121
ES.31951.111	chr7	-	4823	20	NNC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	9	5	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	36.9366456175122	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATGTCTCCCTTTTTGTC	8442	False	NA	0	True	AATAAA	-25	NA	126483866	126464844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126466088_126466168_126466352_126466486_126466594_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.112	chr7	-	4742	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	-19	-3	-19	3	multi-exon	FALSE	canonical	3	55	junction_2	21.6270292703766	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATGTCTCCCTTTTTG	8414	False	NA	-2	True	AATAAA	-23	NA	126483894	126464846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.113	chr7	-	2483	4	NNC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	15	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	28.003967972811	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGATGTCTCCCTTTTTG	8448	False	NA	-2	True	AATAAA	-23	NA	126483860	126464846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126466088_126466168_126466352_126467281_126467934_126483453
ES.31951.114	chr7	-	4593	19	NNC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	51	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	31.9749130057987	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGATGTCTCCCTTTTT	8484	False	NA	-3	True	AATAAA	-22	NA	126483824	126464847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479301_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.115	chr7	-	4622	19	NNC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_18	42.8511636040636	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGGATGTCTCCCTTT	8443	False	NA	-5	True	AATAAA	-20	NA	126483865	126464849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126466088_126466168_126466352_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126481814_126481940_126483077
ES.31951.116	chr7	-	4159	20	Fusion	ENSMUSG00000059981.13_ENSMUSG00000060538.15	novel	4720	19	NA	NA	284	0	multi-exon	FALSE	canonical	2	8	junction_18	31.4364328046174	274	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGGATGTCTCCCTTT	8285	False	NA	-5	True	AATAAA	-20	NA	126488191	126464849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126485379_126485488_126488062
ES.31951.117	chr7	-	7568	13	NIC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	3528	-1	intron_retention	FALSE	canonical	3	63	junction_1	16.9459926432967	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACAGGATGTCTCCCTT	NA	False	NA	-6	True	AATAAA	-19	NA	126478603	126464850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126466088_126466168_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578
ES.31951.118	chr7	-	4491	18	NIC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	29.1425324436953	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACAGGATGTCTCCCTT	8448	False	NA	-6	True	AATAAA	-19	NA	126483860	126464850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126466088_126466168_126466352_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.119	chr7	-	4693	19	NNC	ENSMUSG00000059981.13	novel	4720	19	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	31.6161390260351	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCACAGGATGTCTC	8437	False	NA	-10	True	AATAAA	-15	NA	126483871	126464854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.12	chr7	-	3092	6	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	19878	junction_5	429.262809942813	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398354	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395928_126396025_126396081_126396508_126396721_126396815
ES.31951.122	chr7	-	4959	16	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	29.1841661788641	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCCCAGGCTGCCTCT	8444	False	NA	NA	False	NA	NA	NA	126483864	126468671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.124	chr7	-	5249	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	-262	-2	-262	2	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8171	False	NA	NA	False	NA	NA	NA	126484137	126468672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.125	chr7	-	5101	17	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	38.1984436037648	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	8444	False	NA	NA	False	NA	NA	NA	126483864	126468672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126481814_126481940_126483077
ES.31951.126	chr7	-	5137	21	Fusion	ENSMUSG00000059981.13_ENSMUSG00000060538.15	novel	4985	16	NA	NA	2	2	multi-exon	FALSE	canonical	2	8	junction_15	34.4009810906608	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCCCAGGCTGCCTC	6221	False	NA	NA	False	NA	NA	NA	126497446	126468672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126485379_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ES.31951.127	chr7	-	4746	16	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.9181104572687	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTGGCCCAGGCTGC	8428	False	NA	NA	False	NA	NA	NA	126483880	126468675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473544_126473978_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.128	chr7	-	5088	15	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	15	-1	intron_retention	FALSE	canonical	3	97	junction_13	8.52607046364387	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTGGCCCAGGCTGC	8448	False	NA	NA	False	NA	NA	NA	126483860	126468675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.129	chr7	-	4701	16	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.9181104572687	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTTTGGCCCAGGCTG	8444	False	NA	NA	False	NA	NA	NA	126483864	126468676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473542_126474004_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.132	chr7	-	5020	15	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	43	-27	intron_retention	FALSE	canonical	3	97	junction_13	9.34404754321145	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	8476	False	NA	NA	False	NA	NA	NA	126483832	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.133	chr7	-	7135	7	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	54	-27	intron_retention	FALSE	canonical	3	104	junction_2	7.85281265959316	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	8487	False	NA	NA	False	NA	NA	NA	126483821	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126471735_126473469_126473629_126473820_126475292_126477894_126478460_126478578_126479326_126479419_126479836_126483077
ES.31951.135	chr7	-	3317	15	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	15	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.912201455566	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	8448	False	NA	NA	False	NA	NA	NA	126483860	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126469373_126471349_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.136	chr7	-	4503	14	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	697	-27	intron_retention	FALSE	canonical	3	97	junction_12	8.47271988493192	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	9130	False	NA	NA	False	NA	NA	NA	126483178	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.137	chr7	-	5177	7	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	2885	-27	intron_retention	FALSE	canonical	3	104	junction_2	8.41955396021006	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	NA	False	NA	NA	False	NA	NA	NA	126479246	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126471735_126473469_126473629_126473820_126474397_126475024_126475107_126475197_126475292_126477894_126478460_126478578
ES.31951.138	chr7	-	4881	16	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	-1	-27	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	29.4425240463895	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	8432	False	NA	NA	False	NA	NA	NA	126483876	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479301_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.14	chr7	-	1446	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6699.08251997055	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398356	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395934_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.140	chr7	-	3817	4	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	-3719	-27	intron_retention	FALSE	canonical	3	104	junction_3	7.71722460186015	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	569	False	NA	NA	False	NA	NA	NA	126474532	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126471282_126471368_126471735_126473469_126473629_126473820
ES.31951.143	chr7	-	4504	7	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	3417	-27	intron_retention	FALSE	canonical	3	104	junction_4	9.38083151964686	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATAAAATATCTGAGC	NA	False	NA	NA	False	NA	NA	NA	126478714	126468701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474397_126475024_126475292_126477894
ES.31951.145	chr7	-	5041	15	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	11	-56	intron_retention	FALSE	canonical	3	97	junction_13	9.09249522341118	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	8444	False	NA	NA	False	NA	NA	NA	126483864	126468730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.147	chr7	-	5517	15	NIC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	11	-56	intron_retention	FALSE	canonical	3	97	junction_13	9.27911853660285	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	8444	False	NA	NA	False	NA	NA	NA	126483864	126468730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.148	chr7	-	2902	16	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	12	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.2365068592904	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	8445	False	NA	NA	False	NA	NA	NA	126483863	126468730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126468973_126471251_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.149	chr7	-	5161	20	Fusion	ENSMUSG00000059981.13_ENSMUSG00000060538.15	novel	4985	16	NA	NA	5	-56	intron_retention	FALSE	canonical	2	8	junction_14	34.5957261222825	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	6247	False	NA	NA	False	NA	NA	NA	126497420	126468730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126485379_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ES.31951.15	chr7	-	1869	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19253	junction_4	601.394569788777	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396721_126396815_126396949_126398216
ES.31951.150	chr7	-	4817	15	NNC	ENSMUSG00000059981.13	novel	4985	16	NA	NA	29	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.8849907408311	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCACCAAAAAAGAAAAAAAA	8462	False	NA	NA	False	NA	NA	NA	126483846	126468735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479395_126479492_126479668_126479836_126483077
ES.31951.151	chr7	-	3062	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	21	1902	21	-1902	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACGTGCAGGCCAGCT	8454	False	NA	NA	False	NA	NA	NA	126483854	126470576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ES.31951.152	chr7	-	1646	6	NNC	ENSMUSG00000060538.15	novel	915	6	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.1634655800826	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTGACGTAAAAGAAT	6242	False	NA	53	True	ATTAAA	-20	NA	126497425	126485336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126497073_126497395
ES.31951.154	chr7	-	924	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	-10	1	-10	-1	multi-exon	FALSE	canonical	3	22	junction_5	16.451139778143	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGTAAGGTACTTA	6232	False	NA	-3	True	AATAAA	-13	NA	126497435	126485392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ES.31951.155	chr7	-	725	5	NIC	ENSMUSG00000060538.15	novel	941	6	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	27.4533695563951	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGTAAGGTACTTA	6232	False	NA	-3	True	AATAAA	-13	NA	126497435	126485392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126497395
ES.31951.157	chr7	-	1753	4	NIC	ENSMUSG00000060538.15	novel	1087	5	NA	NA	-10	-1	intron_retention	FALSE	canonical	1	3	junction_1	29.1318840219212	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGTAAGGTACTTA	6232	False	NA	-3	True	AATAAA	-13	NA	126497435	126485392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126485488_126490774_126491005_126495920_126496111_126496197
ES.31951.158	chr7	-	2195	3	ISM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	75	4761	75	0	internal_fragment	FALSE	canonical	3	61	junction_2	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	6317	False	NA	NA	False	NA	NA	NA	126497350	126490152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126491005_126495920_126496111_126496197
ES.31951.16	chr7	-	2448	4	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19619	junction_3	640.548896563634	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126396949_126398216
ES.31951.17	chr7	-	3524	5	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-13	0	intron_retention	FALSE	canonical	3	20251	junction_4	354.559585965462	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398355	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025
ES.31951.18	chr7	-	2602	13	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1460	9	NA	NA	-138	0	multi-exon	FALSE	canonical	1	1	junction_11	9966.53016733451	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	8296	False	NA	-4	True	AATAAA	-17	NA	126408418	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676_126400167_126406855_126407079_126407267_126407409_126408041
ES.31951.19	chr7	-	1434	9	NNC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6725.38012750023	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398223
ES.31951.2	chr7	-	2748	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	72	-1309	-12	1309	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTATGTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	126398354	126393096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.21	chr7	-	1199	8	NNC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7137.65130866461	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398353	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396655_126398255
ES.31951.22	chr7	-	1421	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6695.59761615795	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396528_126396721_126396815_126396949_126398216
ES.31951.24	chr7	-	2886	6	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	11	0	intron_retention	FALSE	canonical	3	19253	junction_3	630.216026454421	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398302	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508
ES.31951.25	chr7	-	2527	13	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1460	9	NA	NA	-130	0	multi-exon	FALSE	canonical	3	16	junction_10	9964.05352448936	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	8304	False	NA	-4	True	AATAAA	-17	NA	126408410	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676_126400167_126406855_126407012_126407267_126407409_126408041
ES.31951.27	chr7	-	1357	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	324	junction_3	6997.18600290029	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.29	chr7	-	2496	12	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1460	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	16	junction_9	10096.2461185309	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	8430	False	NA	-4	True	AATAAA	-17	NA	126408284	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126399459_126399531_126399676_126400167_126406855_126407012_126407267_126407409_126408041
ES.31951.3	chr7	-	2034	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	-523	0	259	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398949	126394405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.30	chr7	-	1430	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6699.08251997055	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398356	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395918_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.32	chr7	-	1606	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8266.83240126575	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397133_126397299_126398216
ES.31951.33	chr7	-	1253	8	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7051.19972423278	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394972_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.35	chr7	-	2887	6	NNC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_5	8133.55485873182	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398352	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395473_126395766_126395928_126396025_126396077_126396508
ES.31951.36	chr7	-	1536	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19253	junction_4	590.139658323799	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126398216
ES.31951.37	chr7	-	2772	8	ISM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	6	1	6	0	intron_retention	FALSE	canonical	3	19253	junction_4	557.41824695718	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398420	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815
ES.31951.38	chr7	-	1934	8	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	862	junction_7	8790.13438405784	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398311	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ES.31951.39	chr7	-	3396	3	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-55	0	intron_retention	FALSE	canonical	0	0	junction_2	10594	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398481	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395928_126396508
ES.31951.4	chr7	-	2804	7	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-43	-2	-14	0	intron_retention	FALSE	canonical	3	19253	junction_4	576.144874720471	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398356	126394405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508
ES.31951.45	chr7	-	3235	5	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	20251	junction_3	369.151053093446	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398357	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395297_126395388_126395928_126396025_126396081_126396508
ES.31951.46	chr7	-	2639	14	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1549	10	NA	NA	-89	0	multi-exon	FALSE	canonical	3	12	junction_9	10019.2830354461	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	8345	False	NA	-4	True	AATAAA	-17	NA	126408369	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126399459_126399531_126399676_126400167_126406855_126407012_126407267_126407409_126408041
ES.31951.47	chr7	-	800	5	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8637.78818260207	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398350	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126396039_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.49	chr7	-	1045	7	NNC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	7603.69034855225	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398355	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396053_126398237
ES.31951.5	chr7	-	3353	11	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1460	9	NA	NA	-66	0	intron_retention	FALSE	canonical	3	16	junction_10	9248.87193391713	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	8368	False	NA	-3	True	AATAAA	-18	NA	126408346	126394405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676_126400167_126406855
ES.31951.51	chr7	-	1434	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6699.08251997055	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398356	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396031_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.53	chr7	-	1829	7	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19619	junction_6	466.768590060071	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398357	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025_126396081_126396508_126396949_126398216
ES.31951.57	chr7	-	1624	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9477.96845841794	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398163	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395476_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126397994
ES.31951.59	chr7	-	2251	13	Fusion	ENSMUSG00000030695.17_ENSMUSG00000114515.3	novel	1549	10	NA	NA	203	0	multi-exon	FALSE	canonical	1	1	junction_12	9967.2225026166	5353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	8637	False	NA	-5	True	AATAAA	-16	NA	126408077	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399676_126400167_126406855_126407012_126407267_126407467_126408041
ES.31951.6	chr7	-	1980	11	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	328	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	9010.39979135221	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398880	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216_126398497_126398633
ES.31951.60	chr7	-	1137	8	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	9014.60801325565	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398357	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396055_126397230_126397299_126398216
ES.31951.61	chr7	-	1535	8	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	19253	junction_3	450.126875538034	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398354	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.63	chr7	-	1423	9	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6691.12874913493	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398357	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394968_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.64	chr7	-	3430	6	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	19878	junction_5	433.531267615151	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398357	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025_126396721_126396815
ES.31951.65	chr7	-	3228	6	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	-41	0	-12	0	intron_retention	FALSE	canonical	3	19253	junction_4	631.070011963807	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398354	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025
ES.31951.67	chr7	-	3188	5	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	20251	junction_3	376.768745386344	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398356	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395928_126396025_126396081_126396508
ES.31951.68	chr7	-	1400	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	8381.04296229309	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126399660	126394407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459_126399531_126399630
ES.31951.7	chr7	-	1223	8	Fusion	ENSMUSG00000064734.3_ENSMUSG00000030695.17	novel	1460	9	NA	NA	6	0	multi-exon	FALSE	non_canonical	0	0	junction_7	7137.65130866461	6056	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126514992	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396674_126514889
ES.31951.71	chr7	-	1683	9	NIC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	862	junction_8	8350.05720040288	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398356	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ES.31951.72	chr7	-	1414	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6699.08251997055	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398356	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395904_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.75	chr7	-	1419	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6736.75124666	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398356	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395459_126395771_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.77	chr7	-	2056	5	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	19619	junction_4	558.365919447095	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398356	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395928_126396025_126396081_126396508_126396949_126398216
ES.31951.78	chr7	-	1596	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9342.73977713229	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398355	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395479_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ES.31951.79	chr7	-	1428	9	NNC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6715.62710679353	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398354	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396823_126396949_126398216
ES.31951.8	chr7	-	1346	9	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_8	6630.75357708308	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126399219	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399173
ES.31951.80	chr7	-	1668	7	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	19253	junction_3	632.865090064401	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTGTTGTTCATGTCT	NA	False	NA	-6	True	AATAAA	-15	NA	126398354	126394408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126398216
ES.31951.83	chr7	-	1368	10	NNC	ENSMUSG00000030695.17	novel	1549	10	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6368.18335240723	5353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTCTGTTGTTCATGTC	NA	False	NA	-7	True	AATAAA	-14	NA	126398356	126394409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396548_126396616_126396721_126396815_126396949_126398216
ES.31951.84	chr7	-	1918	6	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	19619	junction_5	500.093991165661	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTCTGTTGTTCATGTC	NA	False	NA	-7	True	AATAAA	-14	NA	126398356	126394409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395928_126396025_126396081_126396508_126396949_126398216
ES.31951.85	chr7	-	1568	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	-12	-6	intron_retention	FALSE	canonical	3	19253	junction_3	597.235262843441	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTCTGTTGTTCA	NA	False	NA	-11	True	AATAAA	-10	NA	126398354	126394413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ES.31951.86	chr7	-	168	1	Intergenic	novelGene_26181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGATTTTTCTC	9971	False	NA	NA	False	NA	NA	NA	126438690	126438522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126438500_126438700
ES.31951.87	chr7	-	2256	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	76	junction_7	292.908775936141	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGCTTGGATTTC	9921	False	NA	0	True	ATTAAA	-30	NA	126461545	126450752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31951.88	chr7	-	6568	5	NIC	ENSMUSG00000030689.16	novel	883	6	NA	NA	4	1	intron_retention	FALSE	canonical	3	847	junction_2	56.7626637852735	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTTTGTGCTTGGAT	9167	False	NA	-3	True	ATTAAA	-27	NA	126461037	126450755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.89	chr7	-	2100	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9159	False	NA	-4	True	ATTAAA	-26	NA	126461045	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.9	chr7	-	2918	6	NIC	ENSMUSG00000030695.17	novel	1460	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	20251	junction_4	338.369620385755	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126398177	126394406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025_126396081_126396508
ES.31951.90	chr7	-	1919	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-19	0	intron_retention	FALSE	canonical	3	16	junction_6	328.635774410246	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9327	False	NA	-4	True	ATTAAA	-26	NA	126460877	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ES.31951.91	chr7	-	2046	8	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	-12	0	intron_retention	FALSE	canonical	1	6	junction_6	393.610187357793	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9151	False	NA	-4	True	ATTAAA	-26	NA	126461053	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126452164_126452660_126452753_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460454_126460647_126460719_126460876
ES.31951.93	chr7	-	6203	6	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	799	junction_1	72.674617302054	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9198	False	NA	-4	True	ATTAAA	-26	NA	126461006	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.94	chr7	-	1969	7	FSM	ENSMUSG00000030689.16	ENSMUST00000153764.8	719	7	-153	-1097	-16	0	multi-exon	FALSE	canonical	3	53	junction_2	323.952156961487	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9147	False	NA	-4	True	ATTAAA	-26	NA	126461057	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.95	chr7	-	4334	2	ISM	ENSMUSG00000030689.16	ENSMUST00000206090.2	438	4	1315	-1233	1315	0	3prime_fragment	FALSE	canonical	3	226	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	7715	False	NA	-4	True	ATTAAA	-26	NA	126455587	126450756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126452164_126452660
ES.31951.96	chr7	-	1420	8	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	6	18	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	292.908775936141	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGAAACGTCCTCCTC	9923	False	NA	14	True	ATTAAA	-33	NA	126461543	126451586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31951.97	chr7	-	1225	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	328.635774410246	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTCCTTTCCTCTAT	9174	False	NA	-3	True	ATTAAA	-16	NA	126461030	126451603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ES.31951.98	chr7	-	1082	7	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	312.41341022576	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9172	False	NA	-4	True	ATTAAA	-15	NA	126461032	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ES.31951.99	chr7	-	1351	8	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	380.253245367143	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9923	False	NA	-4	True	ATTAAA	-15	NA	126461543	126451604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
ES.31952.1	chr7	+	1699	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	-16	-7	-16	7	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGGGTGAGGGATGCT	NA	False	NA	32	True	AATAAA	-24	NA	126528034	126544810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ES.31952.2	chr7	+	1579	5	NIC	ENSMUSG00000030685.6	novel	1676	6	NA	NA	-7	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	81.0381854436537	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGAAGGTCTGCTGCT	NA	False	NA	11	True	AATAAA	-3	NA	126528043	126544789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126528471_126529804_126529975_126540682_126540736_126541318_126541515_126544056
ES.31952.4	chr7	+	1215	7	NIC	ENSMUSG00000030685.6	novel	1676	6	NA	NA	1	2107	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	87.4922218765125	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCTTTGATCCCAGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	126528051	126546910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126546176_126546286_126546732
ES.31952.6	chr7	+	1740	5	NIC	ENSMUSG00000030685.6	novel	1676	6	NA	NA	12	-12	intron_retention	FALSE	canonical	3	174	junction_2	9.25675429078681	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGGTCTGCTGCTGA	NA	False	NA	13	True	AATAAA	-5	NA	126528062	126544791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126528471_126529804_126529975_126540504_126540736_126541318_126541515_126544056
ES.31952.7	chr7	+	4085	24	Fusion	ENSMUSG00000030685.6_ENSMUSG00000030683.12	novel	3595	18	NA	NA	12	-3	multi-exon	TRUE	canonical	0	0	junction_6	69.9270751655597	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGCCTCTGCTTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	126528062	126569439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126546176_126546286_126550107_126550289_126551171_126551304_126551945_126552246_126552556_126552697_126552886_126553089_126557440_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ES.31952.8	chr7	+	2679	6	NNC	ENSMUSG00000030685.6	novel	1676	6	NA	NA	39	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.4695798249169	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAGGTCTGCTGCTGA	NA	False	NA	13	True	AATAAA	-5	NA	126528089	126544791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126529525_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ES.31953.1	chr7	+	2117	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	201	-344	201	5	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGAGCATGGTCCTTA	NA	False	NA	29	True	NA	NA	NA	126575286	126579678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ES.31953.10	chr7	+	1720	6	NNC	ENSMUSG00000030682.5	novel	1838	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	198.152062820451	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575629	126579671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126575857_126576089_126576225_126577433_126577588_126578011_126578169_126578493_126578576_126578706
ES.31953.11	chr7	+	1748	6	NNC	ENSMUSG00000030682.5	novel	1974	6	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.272287911942	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGATGGATGGTTTTC	NA	False	NA	12	True	NA	NA	NA	126575630	126579661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578161_126578493_126578576_126578706
ES.31953.2	chr7	+	1643	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	334	-3	-130	3	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTGTTTACTTTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	126575419	126579337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ES.31953.3	chr7	+	3615	3	NIC	ENSMUSG00000030682.5	novel	951	5	NA	NA	-103	0	intron_retention	FALSE	canonical	3	398	junction_1	13.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575446	126579671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126575979_126576089_126577588_126578086
ES.31953.4	chr7	+	2391	4	ISM	ENSMUSG00000030682.5	ENSMUST00000206170.2	1833	6	-170	4	-90	-2	intron_retention	FALSE	canonical	3	352	junction_2	30.1367254727886	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGTTTTCTCAGAGCA	NA	False	NA	20	True	NA	NA	NA	126575459	126579669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086
ES.31953.6	chr7	+	1983	5	FSM	ENSMUSG00000030682.5	ENSMUST00000205830.2	805	5	-500	-678	-25	0	multi-exon	FALSE	canonical	3	352	junction_1	32.1121083082379	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575524	126579671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ES.31953.7	chr7	+	2194	5	NIC	ENSMUSG00000030682.5	novel	1833	6	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	352	junction_2	31.6464847968933	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGGTTTTCTCAGAGC	NA	False	NA	19	True	NA	NA	NA	126575524	126579668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578576_126578706
ES.31953.8	chr7	+	1881	6	NNC	ENSMUSG00000030682.5	novel	1838	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	161.696753214157	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTTTCTCAGAGCATG	NA	False	NA	22	True	NA	NA	NA	126575536	126579671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578472_126578576_126578706
ES.31953.9	chr7	+	1725	7	NNC	ENSMUSG00000030682.5	novel	1974	6	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.228315485966	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTCTCAGAGCATGG	NA	False	NA	23	True	NA	NA	NA	126575584	126579672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126575733_126575820_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ES.31954.1	chr7	-	175	1	Intergenic	novelGene_26182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTCAACACTTGGG	8831	False	NA	NA	False	NA	NA	NA	126584047	126583872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126583900_126584000
ES.31955.1	chr7	+	3897	2	Antisense	novelGene_ENSMUSG00000030681.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATAAATAATGGAGCAT	10	False	NA	NA	False	NA	NA	NA	126586171	126590671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126588119_126588721
ES.31955.2	chr7	+	2502	5	Antisense	novelGene_ENSMUSG00000030681.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATAAATAATGGAGCAT	11	False	NA	NA	False	NA	NA	NA	126586172	126590671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126586280_126586640_126586837_126587488_126587617_126587997_126588119_126588721
ES.31956.1	chr7	+	228	1	Intergenic	novelGene_26183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGGACTAAATAAAATAC	1064	False	NA	NA	False	NA	NA	NA	126596293	126596521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126596300_126596500
ES.31957.1	chr7	-	2222	11	NNC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	15272	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.5894482644596	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCCCTCTT	5577	False	NA	-2	True	AATAAA	-19	NA	126595765	126586033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126586284_126586645_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126595673
ES.31957.10	chr7	-	1645	2	ISM	ENSMUSG00000030680.7	ENSMUST00000200948.2	1430	3	46	-101	11	101	intron_retention	FALSE	canonical	3	296	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9476	False	NA	99	True	NA	NA	NA	126616478	126614103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126614642_126615371
ES.31957.11	chr7	-	7440	10	Fusion	ENSMUSG00000092534.9_ENSMUSG00000030678.8	novel	2650	6	NA	NA	209	7096	intron_retention	FALSE	canonical	0	0	junction_4	275.52132403863	1325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTCAGGAGGCAGAGGC	NA	False	NA	-3	True	AATAAA	-45	NA	126625987	126614205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126614642_126615371_126615455_126615614_126620257_126620544_126620628_126622049_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.12	chr7	-	709	3	Fusion	ENSMUSG00000045114.11_ENSMUSG00000107068.2	novel	1412	3	NA	NA	-17	-3	multi-exon	FALSE	canonical	0	0	junction_2	148	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGCGTGGTGGCGC	5554	False	NA	-37	True	AATAAA	-11	NA	126620400	126614239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126614642_126615371_126615455_126620176
ES.31957.13	chr7	-	6700	10	Fusion	ENSMUSG00000092534.9_ENSMUSG00000030678.8	novel	2650	6	NA	NA	203	7062	intron_retention	FALSE	canonical	0	0	junction_4	275.52132403863	1325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGCGTGGTGGCGC	533	False	NA	-37	True	AATAAA	-11	NA	126625421	126614239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126614642_126615371_126615455_126615614_126620257_126620544_126620628_126622189_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.14	chr7	-	3037	3	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	-204	29	intron_retention	FALSE	canonical	3	463	junction_1	155.5	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTGTTGTGTGTGCTC	6	True	NA	2	True	AATAAA	-36	NA	126625948	126621272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622341_126623615_126624112_126624475
ES.31957.18	chr7	-	3169	3	FSM	ENSMUSG00000030678.8	ENSMUST00000206953.2	548	3	-1677	-944	215	24	multi-exon	FALSE	canonical	3	463	junction_1	166.5	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCCCCTGTTGTGTG	NA	False	NA	-3	True	AATAAA	-42	NA	126625981	126621277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126622341_126623615_126623788_126624047
ES.31957.2	chr7	-	2772	15	NNC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.7535149910323	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTTTTCCCTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	126613730	126586033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588108_126588710_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ES.31957.20	chr7	-	4320	2	NNC	ENSMUSG00000030678.8	novel	796	3	NA	NA	-169	16	intron_retention	FALSE	canonical	3	387	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCACCAAGCCCCCT	41	False	NA	-11	True	AATAAA	-34	NA	126625913	126621285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648
ES.31957.21	chr7	-	3164	4	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-162	13	intron_retention	FALSE	canonical	3	25	junction_1	315.884296679795	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATCTTCACCAAGCCC	48	False	NA	-14	True	AATAAA	-31	NA	126625906	126621288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622797_126622879_126623615_126623788_126624047
ES.31957.23	chr7	-	1861	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-173	13	intron_retention	FALSE	non_canonical	0	0	junction_1	321.496014749794	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATCTTCACCAAGCCC	37	False	NA	-14	True	AATAAA	-31	NA	126625917	126621288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621335_126622741_126622879_126623615_126623788_126624047_126624112_126624475
ES.31957.24	chr7	-	3547	3	NNC	ENSMUSG00000030678.8	novel	548	3	NA	NA	218	10	intron_retention	FALSE	canonical	3	387	junction_1	204.5	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTTATCTTCACCAAG	548	False	NA	-17	True	AATAAA	-28	NA	126625406	126621291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126623788_126624047
ES.31957.25	chr7	-	2942	6	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	-42	6	intron_retention	FALSE	canonical	3	90	junction_5	233.299292755036	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTAAGTTATCTTCAC	NA	False	NA	-21	True	AATAAA	-24	NA	126626251	126621295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126625327_126625399_126625487_126626122
ES.31957.26	chr7	-	2547	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	200	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	267.307613060309	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTAAGTTATCTTCAC	NA	False	NA	-21	True	AATAAA	-24	NA	126625996	126621295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622008_126622189_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.27	chr7	-	2808	3	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	173	6	intron_retention	FALSE	canonical	3	463	junction_1	64	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTAAGTTATCTTCAC	503	False	NA	-21	True	AATAAA	-24	NA	126625451	126621295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622341_126623615_126625327_126625399
ES.31957.28	chr7	-	3615	3	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-169	0	intron_retention	FALSE	canonical	3	467	junction_1	164.5	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	41	False	NA	-27	True	AATAAA	-18	NA	126625913	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622879_126623615_126623788_126624047
ES.31957.29	chr7	-	1853	4	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	219	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	303.870952141786	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625977	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622341_126623615_126623788_126624047_126624112_126625399
ES.31957.3	chr7	-	2888	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	-56	5	-56	-5	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGTTTCTTTTTCCCT	NA	False	NA	-5	True	AATAAA	-16	NA	126613849	126586036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ES.31957.30	chr7	-	3022	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	204	0	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625992	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
ES.31957.31	chr7	-	2475	7	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	274.851929833744	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126626222	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624543_126625327_126625399_126625487_126626122
ES.31957.34	chr7	-	2499	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	220	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	289.574446386417	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625976	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625668_126625871
ES.31957.35	chr7	-	2786	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	280.358770149963	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625978	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622797_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.36	chr7	-	4673	1	Genic_Genomic	ENSMUSG00000030678.8	novel	NA	NA	NA	NA	222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126625974	126621301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126621300_126626000
ES.31957.37	chr7	-	2924	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	222	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.408085581588	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	NA	False	NA	-28	True	AATAAA	-17	NA	126625974	126621302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622654_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.38	chr7	-	2047	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.574446386417	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	214	False	NA	-28	True	AATAAA	-17	NA	126625740	126621302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621356_126621774_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.39	chr7	-	2906	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	-377	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	241.899944880798	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGAGTTCCTAAGTTA	NA	False	NA	-28	True	AATAAA	-17	NA	126626586	126621302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ES.31957.4	chr7	-	2829	15	Fusion	ENSMUSG00000030681.19_ENSMUSG00000045114.11	novel	2837	15	NA	NA	29	-9	multi-exon	FALSE	canonical	1	1	junction_14	31.699481744299	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTATGTTTCTTTTT	5674	False	NA	-9	True	AATAAA	-12	NA	126620280	126586040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126620176
ES.31957.40	chr7	-	2629	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	-344	-3	-331	-2	multi-exon	FALSE	canonical	3	90	junction_5	257.403496479749	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGAGTTCCTAAGTT	NA	False	NA	-29	True	AATAAA	-16	NA	126626540	126621303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ES.31957.41	chr7	-	3064	4	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	219	0	intron_retention	FALSE	canonical	3	463	junction_1	137.152793952179	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625977	126621305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622341_126623615_126623788_126624047_126625327_126625399
ES.31957.43	chr7	-	3569	4	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	204	0	intron_retention	FALSE	canonical	3	387	junction_1	83.9258932365665	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625992	126621305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126625327_126625399
ES.31957.45	chr7	-	3371	2	ISM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	245	-1	-207	0	intron_retention	FALSE	canonical	3	463	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	3	True	NA	-31	True	AATAAA	-14	NA	126625951	126621305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126622341_126623615
ES.31957.46	chr7	-	3359	4	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	-225	0	intron_retention	FALSE	canonical	3	387	junction_1	176.98775852207	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	-15	True	NA	-31	True	AATAAA	-14	NA	126625969	126621305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047
ES.31957.49	chr7	-	2846	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	130	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.408085581588	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126626066	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622269_126622740_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.5	chr7	-	3277	5	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	22477	10	19721	-10	3prime_fragment	FALSE	canonical	3	108	junction_4	10.7004672795163	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACATTTATGTTTCTTTT	3708	False	NA	-10	True	AATAAA	-11	NA	126591316	126586041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717
ES.31957.51	chr7	-	2903	7	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	365.981063565984	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126625978	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622263_126622737_126622879_126623279_126623428_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.54	chr7	-	1796	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	37	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	329.208425621216	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	1687	False	NA	-40	True	AATAAA	-5	NA	126624267	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623279_126623428_126623615_126623788_126624047
ES.31957.57	chr7	-	2401	7	NNC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	-33	-8	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	304.07752118315	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126626242	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622797_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ES.31957.61	chr7	-	2173	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-56	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.574446386417	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	154	False	NA	-40	True	AATAAA	-5	NA	126625800	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621881_126622221_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.63	chr7	-	4526	2	ISM	ENSMUSG00000030678.8	ENSMUST00000206291.2	379	3	296	-3744	-169	-8	3prime_fragment	FALSE	canonical	3	591	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	41	False	NA	-40	True	AATAAA	-5	NA	126625913	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126625327_126625399
ES.31957.65	chr7	-	2747	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-173	-8	intron_retention	FALSE	canonical	0	0	junction_2	338.663490798757	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	37	False	NA	-40	True	AATAAA	-5	NA	126625917	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622008_126622189_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475
ES.31957.66	chr7	-	4391	2	NIC	ENSMUSG00000030678.8	novel	548	3	NA	NA	-221	-8	intron_retention	FALSE	canonical	3	796	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	-11	True	NA	-40	True	AATAAA	-5	NA	126625965	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126623788_126624047
ES.31957.67	chr7	-	3039	4	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	201	-8	intron_retention	FALSE	canonical	3	467	junction_1	135.663800133516	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	531	False	NA	-40	True	AATAAA	-5	NA	126625423	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126622879_126623615_126623788_126624047_126625327_126625399
ES.31957.69	chr7	-	1990	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	210	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	352.393870548283	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126625986	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126624913_126625920
ES.31957.7	chr7	-	2817	15	NIC	ENSMUSG00000030681.19	novel	2837	15	NA	NA	-29	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	31.9071516517945	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACATTTATGTTTCTTT	NA	False	NA	-11	True	AATAAA	-10	NA	126611066	126586042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126610972
ES.31957.70	chr7	-	2246	7	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-162	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.19432262463	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	48	False	NA	-40	True	AATAAA	-5	NA	126625906	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621695_126622298_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.71	chr7	-	1950	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	649	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	291.682978591484	1218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	979	False	NA	-40	True	AATAAA	-5	NA	126624975	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622694_126622735_126622879_126623615_126623788_126624047_126624112_126624475
ES.31957.72	chr7	-	2239	8	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	327.937587392006	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126626207	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621592_126621862_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ES.31957.73	chr7	-	2679	7	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-173	-8	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	250.228839709219	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	37	False	NA	-40	True	AATAAA	-5	NA	126625917	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622008_126622189_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ES.31957.77	chr7	-	2408	7	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	49	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	342.74857159926	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	False	NA	-40	True	AATAAA	-5	NA	126626147	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126621435_126621549_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625487_126626122
ES.31957.78	chr7	-	1774	4	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	-193	-8	intron_retention	FALSE	canonical	3	387	junction_1	166.805941807306	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	1457	False	NA	-40	True	AATAAA	-5	NA	126624497	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126622341_126622648_126622879_126623615_126624112_126624475
ES.31957.79	chr7	-	4274	2	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	-208	-8	intron_retention	FALSE	canonical	3	774	junction_1	0	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	2	True	NA	-40	True	AATAAA	-5	NA	126625952	126621314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126624112_126624475
ES.31957.8	chr7	-	2340	1	Genic_Genomic	ENSMUSG00000030680.7_ENSMUSG00000092534.9_ENSMUSG00000107068.2	novel	NA	NA	NA	NA	46	101	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9511	False	NA	99	True	NA	NA	NA	126616443	126614103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126614100_126616400
ES.31957.9	chr7	-	2223	2	ISM	ENSMUSG00000107068.2	ENSMUST00000202624.2	569	3	3725	-1302	38	119	3prime_fragment	FALSE	canonical	3	276	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9468	False	NA	99	True	NA	NA	NA	126616486	126614103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126615455_126615614
ES.31958.1	chr7	-	3822	11	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-30	4	intron_retention	FALSE	canonical	3	712	junction_6	45.79792571722	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTTTTTGAGGATGA	7957	False	NA	0	True	AATACA	-19	NA	126641611	126626896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126631937_126632053_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.10	chr7	-	2368	12	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	22	0	intron_retention	FALSE	canonical	3	689	junction_8	51.8055806049713	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGCCTGGTTTTTGA	7947	False	NA	-6	True	AATACA	-13	NA	126641621	126626902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.11	chr7	-	2074	13	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_5	218.924057735909	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7965	False	NA	-7	True	AATACA	-12	NA	126641603	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126627013_126627102_126627455_126628086_126628149_126628506_126628673_126630100_126630191_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.15	chr7	-	2137	15	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	268.685015873796	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7975	False	NA	-7	True	AATACA	-12	NA	126641593	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126635202_126635276_126641515
ES.31958.16	chr7	-	2129	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	689	junction_7	51.3589627577851	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7989	False	NA	-7	True	AATACA	-12	NA	126641579	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.17	chr7	-	2397	12	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-20	0	intron_retention	FALSE	canonical	3	712	junction_7	46.1932698757966	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7967	False	NA	-7	True	AATACA	-12	NA	126641601	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.18	chr7	-	1964	14	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-30	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	209.187806675099	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7957	False	NA	-7	True	AATACA	-12	NA	126641611	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126627013_126627102_126627163_126627241_126627337_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.19	chr7	-	4945	3	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-721	0	intron_retention	FALSE	canonical	3	712	junction_2	57	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	NA	False	NA	-7	True	AATACA	-12	NA	126632597	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627455_126628086_126631937_126632053
ES.31958.2	chr7	-	2113	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	5	-3	5	1	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTGGTTTTTGAGGA	7930	False	NA	-3	True	AATACA	-16	NA	126641638	126626899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.20	chr7	-	5583	9	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	712	junction_3	49.5465374673145	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7989	False	NA	-7	True	AATACA	-12	NA	126641579	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627163_126627241_126627455_126628086_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.21	chr7	-	4884	8	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	712	junction_2	51.9638807053436	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7971	False	NA	-7	True	AATACA	-12	NA	126641597	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126628673_126630100_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.22	chr7	-	3313	5	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-322	0	intron_retention	FALSE	canonical	3	712	junction_4	29.92490601489	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	NA	False	NA	-7	True	AATACA	-12	NA	126632198	126626903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627163_126627241_126628149_126628506_126628673_126630100_126631937_126632053
ES.31958.23	chr7	-	1869	10	ISM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	32	1373	-30	0	5prime_fragment	FALSE	canonical	3	689	junction_4	55.6616764230312	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTCATGTTG	7957	False	NA	NA	False	NA	NA	NA	126641611	126628275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.24	chr7	-	2173	2	NNC	ENSMUSG00000030677.9	novel	3586	4	NA	NA	-6	-25	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTTCCCTACCCCAC	7981	False	NA	NA	False	NA	NA	NA	126641587	126631424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126631528_126639517
ES.31958.25	chr7	-	1711	2	ISM	ENSMUSG00000030677.9	ENSMUST00000206412.2	3586	4	-37	2105	25	-748	5prime_fragment	FALSE	canonical	3	876	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATAGAGCCTTTAAAGC	7950	False	NA	NA	False	NA	NA	NA	126641618	126633504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126635113_126641515
ES.31958.26	chr7	-	2233	1	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	25	-6629	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGCCAAGGCTAGCAA	7950	False	NA	NA	False	NA	NA	NA	126641618	126639385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126639400_126641600
ES.31958.3	chr7	-	3369	9	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-29	0	intron_retention	FALSE	canonical	3	712	junction_3	52.3078328264515	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7958	False	NA	-4	True	AATACA	-15	NA	126641610	126626900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.4	chr7	-	2185	13	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_5	219.896692916368	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7981	False	NA	-4	True	AATACA	-15	NA	126641587	126626900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628671_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.5	chr7	-	2399	13	NNC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	19	0	intron_retention	FALSE	canonical	3	4	junction_3	216.586443481581	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7944	False	NA	-4	True	AATACA	-15	NA	126641624	126626900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126627013_126627102_126627163_126627241_126627630_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.6	chr7	-	3974	7	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	-1541	0	intron_retention	FALSE	canonical	3	712	junction_3	42.9133493863571	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	NA	False	NA	-4	True	AATACA	-15	NA	126633417	126626900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627455_126628086_126628673_126630100_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295
ES.31958.7	chr7	-	2808	12	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	712	junction_6	45.3553463002602	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGGTTTTTGAGG	7992	False	NA	-4	True	AATACA	-15	NA	126641576	126626900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31958.8	chr7	-	3834	11	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	689	junction_8	54.3308383885248	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGCCTGGTTTTTGAG	7993	False	NA	-5	True	AATACA	-14	NA	126641575	126626901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126635113_126641515
ES.31958.9	chr7	-	4930	7	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	13	-1	intron_retention	FALSE	canonical	3	712	junction_2	54.3734514466594	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGCCTGGTTTTTGAG	8003	False	NA	-5	True	AATACA	-14	NA	126641565	126626901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126628673_126630100_126631937_126632053_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ES.31959.1	chr7	-	179	1	Intergenic	novelGene_26184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAACATTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	126661945	126661766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126661800_126661900
ES.3196.1	chr10	-	173	1	Intergenic	novelGene_2508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATATTAGAGCC	NA	False	NA	NA	False	NA	NA	NA	77457300	77457127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77457100_77457300
ES.31960.1	chr7	-	169	1	Intergenic	novelGene_26185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAGCTAGGAGGAAGA	9200	False	NA	NA	False	NA	NA	NA	126667233	126667064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126667100_126667200
ES.31961.1	chr7	+	177	1	Intergenic	novelGene_26186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	126682669	126682846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126682700_126682800
ES.31962.1	chr7	-	1745	1	Intergenic	novelGene_26187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATGAATAAAA	NA	False	NA	NA	False	NA	NA	NA	126684960	126683215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126683200_126685000
ES.31963.1	chr7	+	2594	5	NNC	ENSMUSG00000045165.7	novel	1932	2	NA	NA	-2358	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9711431702997	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	69	True	NA	NA	NA	126688172	126693221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126688453_126689491_126689556_126689901_126690035_126690408_126690645_126691340
ES.31963.2	chr7	+	2242	3	NNC	ENSMUSG00000045165.7	novel	1932	2	NA	NA	-687	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTTTTGTATGACCT	NA	False	NA	3	True	NA	NA	NA	126689843	126693155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126690035_126690408_126690645_126691340
ES.31963.3	chr7	+	2071	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	-141	2	-141	-2	multi-exon	FALSE	canonical	3	90	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTTTGTATGACCTC	NA	False	NA	4	True	NA	NA	NA	126690389	126693156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126690645_126691340
ES.31964.1	chr7	-	1836	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	64	150	64	-150	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTGTTGT	NA	False	NA	-2	True	NA	NA	NA	126721334	126706435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
ES.31964.2	chr7	-	1938	3	NIC	ENSMUSG00000030674.6	novel	2050	4	NA	NA	-10	-157	intron_retention	FALSE	canonical	3	87	junction_1	4.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTCTTTGTTGTTGTTG	NA	False	NA	-9	True	NA	NA	NA	126721200	126706442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126707414_126707505_126708417_126721144
ES.31964.3	chr7	-	1208	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	185	657	0	-657	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAATGAGTGGTTGGTAA	NA	False	NA	0	True	NA	NA	NA	126721213	126706942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
ES.31964.4	chr7	-	2506	2	ISM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	11858	657	11650	-657	intron_retention	FALSE	canonical	3	87	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAATGAGTGGTTGGTAA	NA	False	NA	0	True	NA	NA	NA	126709540	126706942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126707414_126707505
ES.31965.1	chr7	-	201	1	Intergenic	novelGene_26188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAATAAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	126727178	126726977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126727000_126727200
ES.31966.1	chr7	+	184	2	Intergenic	novelGene_26189	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAGGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	126737834	126821004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126737982_126820967
ES.31966.10	chr7	+	694	7	FSM	ENSMUSG00000030672.13	ENSMUST00000206772.2	653	7	-42	1	-33	0	multi-exon	FALSE	canonical	3	19	junction_1	719.114598346853	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	209	False	NA	31	True	AATAAA	-23	NA	126808028	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126808124_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.11	chr7	+	802	8	NNC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	793.233295584905	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	223	False	NA	31	True	AATAAA	-23	NA	126808042	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126808124_126808455_126808571_126812025_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.12	chr7	+	741	8	NNC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	789.211619017255	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	236	False	NA	31	True	AATAAA	-23	NA	126808055	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126808124_126808455_126808530_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.13	chr7	+	663	7	NNC	ENSMUSG00000030672.13	novel	766	7	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	724.760190223865	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	2906	False	NA	31	True	AATAAA	-23	NA	126810725	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126810790_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.14	chr7	+	722	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	3937	False	NA	31	True	AATAAA	-23	NA	126811756	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.15	chr7	+	696	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	712.609621196783	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	3977	False	NA	31	True	AATAAA	-23	NA	126811796	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126811894_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.16	chr7	+	776	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1085	2	14	-2	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTGTGTTCATGCG	4045	False	NA	40	True	AATAAA	-32	NA	126811864	126813468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.17	chr7	+	631	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	724.760190223865	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	4052	False	NA	31	True	AATAAA	-23	NA	126811871	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126811904_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.18	chr7	+	573	5	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1490	11	-16	0	3prime_fragment	FALSE	canonical	3	1768	junction_4	19.9311314279947	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	4450	False	NA	31	True	AATAAA	-23	NA	126812269	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.19	chr7	+	520	5	NNC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	778.47832339764	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	4462	False	NA	31	True	AATAAA	-23	NA	126812281	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126812413_126812589_126812695_126812781_126812820_126813106_126813156_126813262
ES.31966.2	chr7	+	3537	5	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126803976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798382_126798466_126798624_126798903_126799567_126802335_126802450_126802544
ES.31966.20	chr7	+	1178	1	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	-4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	4462	False	NA	31	True	AATAAA	-23	NA	126812281	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126812300_126813500
ES.31966.21	chr7	+	662	4	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	72	0	intron_retention	FALSE	canonical	3	1768	junction_3	20.2155056000751	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	4538	False	NA	31	True	AATAAA	-23	NA	126812357	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126812695_126812781_126812861_126813106_126813156_126813262
ES.31966.22	chr7	+	408	2	FSM	ENSMUSG00000030672.13	ENSMUST00000139613.2	285	2	-123	0	-123	0	multi-exon	FALSE	canonical	3	1768	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	268	False	NA	31	True	AATAAA	-23	NA	126812944	126813459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126813156_126813262
ES.31966.23	chr7	+	144	1	Intergenic	novelGene_26195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1324	False	NA	NA	False	NA	NA	NA	126815331	126815475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126815300_126815500
ES.31966.24	chr7	+	203	1	Intergenic	novelGene_26196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGTGGCTTAATCAA	6816	False	NA	NA	False	NA	NA	NA	126820823	126821026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126820800_126821000
ES.31966.3	chr7	+	3288	3	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798382_126798466_126798624_126798903
ES.31966.4	chr7	+	3230	3	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798624_126798903_126799099_126799269
ES.31966.5	chr7	+	3681	1	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126797200_126800900
ES.31966.6	chr7	+	3596	2	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798382_126798466
ES.31966.7	chr7	+	3400	2	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1943	False	NA	NA	False	NA	NA	NA	126797211	126800891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798624_126798903
ES.31966.8	chr7	+	3467	3	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1947	False	NA	NA	False	NA	NA	NA	126797215	126800891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_126798382_126798466_126799338_126799461
ES.31966.9	chr7	+	3185	8	NIC	ENSMUSG00000030672.13	novel	766	7	NA	NA	-41	2	intron_retention	FALSE	canonical	3	86	junction_1	765.607855076672	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCAATTTCAGTGTGTT	201	False	NA	34	True	AATAAA	-26	NA	126808020	126813462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126808124_126808455_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ES.31967.1	chr7	+	3537	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-329	134	-329	2	multi-exon	FALSE	canonical	3	192	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTTATGTGTATG	7779	False	NA	30	True	AATAAA	-20	NA	126831903	126837217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832659_126834435
ES.31967.2	chr7	+	3629	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	-271	-16	-271	16	multi-exon	FALSE	canonical	3	192	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCTGCTTTCATTGG	7837	False	NA	16	True	AATAAA	-17	NA	126831961	126837367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832659_126834435
ES.31967.3	chr7	+	3500	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	-457	0	-263	0	multi-exon	FALSE	canonical	3	35	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTATGTGTA	7845	False	NA	28	True	AATAAA	-18	NA	126831969	126837215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832690_126834435
ES.31967.4	chr7	+	4994	1	FSM	ENSMUSG00000045598.11	ENSMUST00000205367.2	827	1	-244	-3923	-11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTATGTGTA	8097	False	NA	28	True	AATAAA	-18	NA	126832221	126837215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832200_126837200
ES.31967.5	chr7	+	3170	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	23	-150	-16	14	multi-exon	FALSE	canonical	3	35	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTAAGCTGCTTTCATT	8325	False	NA	14	True	AATAAA	-15	NA	126832449	126837365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832690_126834435
ES.31967.6	chr7	+	2449	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	219	674	-14	-538	multi-exon	FALSE	canonical	3	192	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTAGTCTGGGAGAGCA	8327	False	NA	NA	False	NA	NA	NA	126832451	126836677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126832659_126834435
ES.31967.7	chr7	+	1780	2	NNC	ENSMUSG00000045598.11	novel	3342	2	NA	NA	1968	5022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATTTGCTGGGCATG	NA	False	NA	NA	False	NA	NA	NA	126834433	126842373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126835339_126841498
ES.31967.8	chr7	+	2169	2	NNC	ENSMUSG00000045598.11	novel	3342	2	NA	NA	2336	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTGTGTGTGGTTAT	NA	False	NA	23	True	AATAAA	-13	NA	126834801	126837210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126834810_126835049
ES.31968.1	chr7	-	177	1	Intergenic	novelGene_26190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	126752507	126752330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126752300_126752500
ES.31969.1	chr7	-	179	1	Intergenic	novelGene_26191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	126759091	126758912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126758900_126759100
ES.31969.2	chr7	-	178	2	Intergenic	novelGene_26192	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	126760970	126758912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126759040_126760919
ES.3197.1	chr10	-	219	1	Intergenic	novelGene_2509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTGCAGAGGTTACTC	NA	False	NA	NA	False	NA	NA	NA	77463240	77463021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77463000_77463200
ES.31970.1	chr7	-	176	1	FSM	ENSMUSG00000108717.2	ENSMUST00000206225.2	1247	1	-169	1240	-169	-1240	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGTGTACTAAG	4268	False	NA	NA	False	NA	NA	NA	126772546	126772370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126772400_126772500
ES.31971.1	chr7	-	943	1	Intergenic	novelGene_26193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTACACATTACTTGT	7609	False	NA	NA	False	NA	NA	NA	126784903	126783960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126784000_126784900
ES.31972.1	chr7	-	2974	1	Intergenic	novelGene_26194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTACCTCCTGTTTTGA	9741	False	NA	NA	False	NA	NA	NA	126789436	126786462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126786500_126789400
ES.31973.10	chr7	-	3776	3	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	604	junction_2	15.5	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5371	False	NA	-2	True	NA	NA	NA	126795259	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126794331_126794532
ES.31973.11	chr7	-	2912	7	NNC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	226.300991798288	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5462	False	NA	-2	True	NA	NA	NA	126795168	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126793103_126793186_126793288_126793370_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.12	chr7	-	3710	2	ISM	ENSMUSG00000042502.11	ENSMUST00000206081.2	432	3	113	-3066	1	-1	intron_retention	FALSE	canonical	3	604	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5521	False	NA	-2	True	NA	NA	NA	126795109	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126794331_126794532
ES.31973.13	chr7	-	3000	7	FSM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	-59	-1632	4	-1	multi-exon	FALSE	canonical	2	2	junction_6	224.819680830858	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5524	False	NA	-2	True	NA	NA	NA	126795106	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126794958
ES.31973.15	chr7	-	3789	2	NIC	ENSMUSG00000042502.11	novel	920	4	NA	NA	3	-1	intron_retention	FALSE	canonical	3	600	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5523	False	NA	-2	True	NA	NA	NA	126795107	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126794074_126794194
ES.31973.16	chr7	-	5536	7	FSM	ENSMUSG00000042502.11_ENSMUSG00000042492.13	ENSMUST00000205316.2	2912	7	-2626	2	1372	-2	multi-exon	TRUE	canonical	3	19	junction_6	218.502034061216	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTGGTAATTTAATA	-14	True	NA	-3	True	NA	NA	NA	126797785	126791198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795100
ES.31973.17	chr7	-	3504	4	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	1	-2	intron_retention	FALSE	canonical	3	600	junction_2	15.6418242755334	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTGGTAATTTAATA	5521	False	NA	-3	True	NA	NA	NA	126795109	126791198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126794074_126794194_126794331_126794532
ES.31973.18	chr7	-	2943	6	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	-177	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	242.479359946367	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGTGGTAATTTAATA	5837	False	NA	-3	True	NA	NA	NA	126794793	126791198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794012_126794194_126794331_126794532
ES.31973.19	chr7	-	2958	7	NNC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	268.419861825131	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5522	False	NA	-4	True	NA	NA	NA	126795108	126791199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794440_126794634_126795086
ES.31973.20	chr7	-	2946	6	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	3	-3	intron_retention	FALSE	canonical	3	74	junction_5	212.877805325027	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5523	False	NA	-4	True	NA	NA	NA	126795107	126791199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
ES.31973.21	chr7	-	3110	5	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	21	-3	intron_retention	FALSE	canonical	3	356	junction_4	103.531396204243	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	5429	False	NA	-4	True	NA	NA	NA	126795201	126791199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.22	chr7	-	7974	15	Fusion	ENSMUSG00000042502.11_ENSMUSG00000042492.13	novel	3614	9	NA	NA	8	-3	multi-exon	FALSE	canonical	3	22	junction_2	151.323413621964	955	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	1550	False	NA	-4	True	NA	NA	NA	126807632	126791199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126793103_126793186_126793288_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.23	chr7	-	3915	1	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-1	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACATTGTGGTAATTTAA	5515	False	NA	-5	True	NA	NA	NA	126795115	126791200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126791200_126795100
ES.31973.28	chr7	-	3179	6	FSM	ENSMUSG00000042502.11	ENSMUST00000205525.2	3072	6	-114	7	-13	-5	multi-exon	FALSE	canonical	3	356	junction_5	100.663796868586	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACATTGTGGTAATTTA	5395	False	NA	-6	True	NA	NA	NA	126795235	126791201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794634_126795100
ES.31973.29	chr7	-	3501	5	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	11	-5	intron_retention	FALSE	canonical	3	578	junction_2	20.3270140453535	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACATTGTGGTAATTTA	5419	False	NA	-6	True	NA	NA	NA	126795211	126791201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793814_126793915_126794074_126794194_126794331_126794532
ES.31973.3	chr7	-	3371	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTTTTTTG	5515	False	NA	-4	True	AATAAA	-15	NA	126795115	126790829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
ES.31973.30	chr7	-	2993	6	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	1	-6	intron_retention	FALSE	canonical	3	356	junction_5	100.950681027916	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTACATTGTGGTAATTT	5459	False	NA	-7	True	NA	NA	NA	126795171	126791202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.31	chr7	-	3561	4	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	5	-6	intron_retention	FALSE	canonical	3	600	junction_2	1.69967317119759	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTACATTGTGGTAATTT	5463	False	NA	-7	True	NA	NA	NA	126795167	126791202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793294_126793374_126794074_126794194_126794331_126794532
ES.31973.32	chr7	-	3020	6	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	1	-6	intron_retention	FALSE	canonical	3	356	junction_5	101.041377662817	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTACATTGTGGTAATTT	5472	False	NA	-7	True	NA	NA	NA	126795158	126791202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794331_126794532_126794634_126795100
ES.31973.35	chr7	-	1856	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	3	1425	3	573	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATTGTAGTGTACGTTT	5461	False	NA	NA	False	CATAAA	-23	NA	126795169	126792256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.36	chr7	-	1808	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	2	572	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCATTGTAGTGTACGTT	5522	False	NA	NA	False	CATAAA	-22	NA	126795108	126792257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
ES.31973.37	chr7	-	2039	6	ISM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	-60	-351	3	351	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCTGATTTTTCTACC	5523	False	NA	NA	False	NA	NA	NA	126795107	126792478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
ES.31973.38	chr7	-	1642	7	NNC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-175	348	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	225.191338396682	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATAGTCTGATTTTTCT	5839	False	NA	NA	False	NA	NA	NA	126794791	126792481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794711
ES.31973.39	chr7	-	1677	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-26	348	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATAGTCTGATTTTTCT	5557	False	NA	NA	False	NA	NA	NA	126795073	126792481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
ES.31973.4	chr7	-	3140	6	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-51	7	intron_retention	FALSE	canonical	3	356	junction_5	96.3460429908774	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCGCCCAGCTACGCT	5357	False	NA	35	True	NA	NA	NA	126795273	126791160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.40	chr7	-	1387	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	-99	1996	-49	2	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTTTGGCTTCACCT	5359	False	NA	-2	True	AATAAA	-42	NA	126795271	126792827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.41	chr7	-	1435	6	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-13	2	intron_retention	FALSE	canonical	3	356	junction_5	96.3460429908774	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTTTGGCTTCACCT	5395	False	NA	-2	True	AATAAA	-42	NA	126795235	126792827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.42	chr7	-	1237	7	NIC	ENSMUSG00000042502.11	novel	2906	7	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTTTGGCTTCACCT	5523	False	NA	-2	True	AATAAA	-42	NA	126795107	126792827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
ES.31973.43	chr7	-	6372	14	Fusion	ENSMUSG00000042502.11_ENSMUSG00000042492.13	novel	3614	9	NA	NA	-268	0	intron_retention	FALSE	canonical	3	338	junction_8	111.223587383848	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	1995	False	NA	-4	True	AATAAA	-40	NA	126807187	126792829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.44	chr7	-	1349	7	NIC	ENSMUSG00000042502.11	novel	1309	7	NA	NA	0	-17	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAGGGCTTCTCCATA	5520	False	NA	-21	True	AATAAA	-23	NA	126795110	126792846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
ES.31973.45	chr7	-	1351	7	FSM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	-60	18	3	-18	multi-exon	FALSE	canonical	2	2	junction_6	224.819680830858	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCAGGGCTTCTCCAT	5523	False	NA	-22	True	AATAAA	-22	NA	126795107	126792847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126794958
ES.31973.49	chr7	-	1337	7	NNC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-31	-24	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	218.838156839453	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAAGAGCCAGGGCTT	5377	False	NA	-28	True	AATAAA	-16	NA	126795253	126792853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126793103_126793186_126793288_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ES.31973.5	chr7	-	3005	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	200.670058110876	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5514	False	NA	-1	True	NA	NA	NA	126795116	126791196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126794958
ES.31973.50	chr7	-	1845	5	NIC	ENSMUSG00000042502.11	novel	1309	7	NA	NA	3	-26	intron_retention	FALSE	canonical	3	578	junction_3	20.2792997906732	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGCCAAGAGCCAGGGC	5461	False	NA	-30	True	AATAAA	-14	NA	126795169	126792855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794331_126794532
ES.31973.51	chr7	-	3832	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-218	0	-218	0	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTCCAGCTCCTTC	1324	False	NA	NA	False	AGTAAA	-27	NA	126807858	126796630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.52	chr7	-	3718	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	20	0	intron_retention	FALSE	canonical	3	338	junction_3	36.6361035268852	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTCCAGCTCCTTC	1562	False	NA	NA	False	AGTAAA	-27	NA	126807620	126796630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.54	chr7	-	3823	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-311	102	-311	-102	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGTCTCTGTTTTCTGA	1231	False	NA	0	True	NA	NA	NA	126807951	126796732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.55	chr7	-	3743	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	-109	-104	intron_retention	FALSE	canonical	3	338	junction_3	36.6361035268852	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTACGTCTCTGTTTTCT	1433	False	NA	-2	True	NA	NA	NA	126807749	126796734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.59	chr7	-	3223	10	NNC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	32	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.978022759362	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATAATGTACGTCTCTG	1574	False	NA	-8	True	NA	NA	NA	126807608	126796740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126798047_126798295_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.6	chr7	-	5989	16	Fusion	ENSMUSG00000042502.11_ENSMUSG00000042492.13	novel	3614	9	NA	NA	28	-1	multi-exon	FALSE	canonical	0	0	junction_7	157.064233144702	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	1570	False	NA	-2	True	NA	NA	NA	126807612	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100_126795807_126797779_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.60	chr7	-	3759	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	-482	337	-482	-337	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCCTTGTTATTTGAAG	1060	False	NA	0	True	AATGAA	-19	NA	126808122	126796967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.61	chr7	-	3382	9	NNC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	-14	-337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	132.382967182338	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGCCTTGTTATTTGAAG	1528	False	NA	0	True	AATGAA	-19	NA	126807654	126796967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802821_126803013_126806621
ES.31973.62	chr7	-	3482	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	53	-338	intron_retention	FALSE	canonical	3	338	junction_3	36.3531431984658	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTTGTTATTTGAA	1595	False	NA	-1	True	AATGAA	-18	NA	126807587	126796968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126803013_126806621
ES.31973.63	chr7	-	3328	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	33	-338	intron_retention	FALSE	canonical	3	338	junction_2	31.8824371075733	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTTGTTATTTGAA	1575	False	NA	-1	True	AATGAA	-18	NA	126807607	126796968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.66	chr7	-	3188	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	21	-339	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	138.65652762514	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1563	False	NA	-2	True	AATGAA	-17	NA	126807619	126796969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.67	chr7	-	3550	9	NNC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	26	-339	intron_retention	FALSE	canonical	0	0	junction_4	169.289646390439	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1568	False	NA	-2	True	AATGAA	-17	NA	126807614	126796969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799572_126801285_126801463_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.69	chr7	-	3479	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	76	-339	intron_retention	FALSE	canonical	3	338	junction_2	32.376610353142	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1618	False	NA	-2	True	AATGAA	-17	NA	126807564	126796969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.7	chr7	-	4728	6	ISM	ENSMUSG00000042502.11	ENSMUST00000205316.2	2912	7	-1356	1	-1293	-1	intron_retention	FALSE	canonical	3	578	junction_3	18.2274518241031	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	4115	False	NA	-2	True	NA	NA	NA	126796515	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
ES.31973.70	chr7	-	3637	7	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	90	-339	intron_retention	FALSE	canonical	3	344	junction_4	30.5559595932883	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGCCTTGTTATTTGA	1632	False	NA	-2	True	AATGAA	-17	NA	126807550	126796969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.72	chr7	-	3247	9	NNC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	20	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.048118548112	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGCCTTGTTATTT	1562	False	NA	-4	True	AATGAA	-15	NA	126807620	126796971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806627
ES.31973.73	chr7	-	1823	2	NNC	ENSMUSG00000042492.13	novel	1055	7	NA	NA	-101	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGCCTTGTTATTT	1441	False	NA	-4	True	AATGAA	-15	NA	126807741	126796971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126798155_126807101
ES.31973.75	chr7	-	3093	7	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	-6	-346	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	149.879303292868	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTGTCTCCCGCCTTGT	1536	False	NA	-9	True	AATGAA	-10	NA	126807646	126796976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ES.31973.77	chr7	-	2662	1	Genic_Genomic	ENSMUSG00000042492.13	novel	NA	NA	NA	NA	-83	-2937	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTATCTTCCTGAGCCT	1459	False	NA	NA	False	NA	NA	NA	126807723	126805061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126805100_126807700
ES.31973.8	chr7	-	2873	7	FSM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	3	30	3	-1	multi-exon	FALSE	canonical	0	0	junction_6	225.562999329825	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5523	False	NA	-2	True	NA	NA	NA	126795107	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795086
ES.31973.9	chr7	-	2928	7	NIC	ENSMUSG00000042502.11	novel	3284	7	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_6	198.070413966571	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	5462	False	NA	-2	True	NA	NA	NA	126795168	126791197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795086
ES.31974.1	chr7	-	2227	10	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	11	671	intron_retention	FALSE	canonical	3	221	junction_9	51.3653099058927	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGCTCATGCATTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	126817632	126812947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ES.31974.10	chr7	-	1523	12	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	122.77554606168	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCGGAGTCTTCTT	NA	False	NA	-5	True	AATAAA	-20	NA	126817619	126813616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816544_126816616_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ES.31974.11	chr7	-	1624	11	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	559	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.378334315728	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCGGAGTCTTCTT	414	False	NA	-5	True	AATAAA	-20	NA	126831259	126813616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126831046
ES.31974.12	chr7	-	1744	11	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	232	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	99.5622418389622	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGCCGGAGTCTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	126832070	126813617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126831736
ES.31974.13	chr7	-	3031	8	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_5	121.201973446586	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126817620	126813618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815489_126815532_126817230_126817312_126817404_126817578
ES.31974.15	chr7	-	1134	8	NNC	ENSMUSG00000000486.14	novel	1285	10	NA	NA	-551	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	119.199712367822	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126816762	126813618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816735
ES.31974.16	chr7	-	1524	11	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	96.582658898997	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCTGCCGGAGTC	NA	False	NA	-10	True	AATAAA	-15	NA	126817614	126813621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817496
ES.31974.17	chr7	-	1774	9	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	16	-5	intron_retention	FALSE	canonical	3	221	junction_8	52.6070337502505	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCCCAGCTGCCGGAG	NA	False	NA	-12	True	AATAAA	-13	NA	126817627	126813623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126816208_126816790_126817230_126817312_126817404_126817578
ES.31974.18	chr7	-	80	1	Intergenic	novelGene_26197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGACCGTTTCTTGTGG	7407	False	NA	NA	False	NA	NA	NA	126824266	126824186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126824200_126824300
ES.31974.19	chr7	-	695	1	FSM	ENSMUSG00000000486.14	ENSMUST00000205570.2	713	1	10	8	10	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATGCATCGTCTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	126832292	126831597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126831600_126832300
ES.31974.2	chr7	-	1586	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	-81	-19	-81	4	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817751	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ES.31974.3	chr7	-	2440	7	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-20	4	intron_retention	FALSE	canonical	3	221	junction_6	54.3874985635486	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817618	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126817404_126817578
ES.31974.5	chr7	-	3680	4	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	16	4	intron_retention	TRUE	non_canonical	0	0	junction_2	133.072244372079	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817627	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814928_126815039_126815487_126815532_126817404_126817578
ES.31974.6	chr7	-	1286	11	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	98.6456283876787	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817632	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814163_126814584_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ES.31974.7	chr7	-	1582	10	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-19	4	intron_retention	FALSE	canonical	2	9	junction_5	104.498213110129	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817617	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815179_126815861_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ES.31974.8	chr7	-	3102	8	NNC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	-7	4	intron_retention	TRUE	non_canonical	0	0	junction_5	150.97181788638	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGAGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-22	NA	126817605	126813614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815489_126815532_126817230_126817312_126817404_126817496
ES.31975.1	chr7	+	1599	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	-112	-3	-112	3	multi-exon	FALSE	canonical	3	88	junction_1	20	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGCCTGTAAGTGAGGT	NA	False	NA	34	True	AATAAA	-19	NA	126843333	126853978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_126843781_126844156_126844307_126852976
ES.31975.2	chr7	+	1199	3	NNC	ENSMUSG00000054716.5	novel	1484	3	NA	NA	300	2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	61.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGATGCCTGTAAGTGAGG	NA	False	NA	33	True	AATAAA	-18	NA	126843745	126853977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126843781_126844143_126844307_126852976
ES.31975.3	chr7	+	5632	1	NIC	ENSMUSG00000054716.5	novel	1484	3	NA	NA	3983	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACGATGCCTGTAAGT	428	False	NA	29	True	AATAAA	-14	NA	126848341	126853973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_126848300_126854000
ES.31975.4	chr7	+	2985	2	Genic_Genomic	ENSMUSG00000054716.5	novel	1484	3	NA	NA	6258	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCACGATGCCTGTAA	2703	False	NA	27	True	AATAAA	-12	NA	126850616	126853971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_126850900_126851269
ES.31976.1	chr7	-	878	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	19	-221	19	221	multi-exon	FALSE	canonical	3	3852	junction_1	65	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTTCCTTCTTTAC	2509	False	NA	NA	False	AGTAAA	-32	NA	126859862	126855909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126856509_126858529_126858641_126859694
ES.31976.2	chr7	-	683	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	-10	3	-10	-3	multi-exon	FALSE	canonical	3	3852	junction_1	65	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCTCGATTTTTCTTG	2480	False	NA	-4	True	AATAAA	-15	NA	126859891	126856133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126856509_126858529_126858641_126859694
ES.31976.3	chr7	-	570	3	NNC	ENSMUSG00000042462.5	novel	676	3	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1925.5	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCTCGATTTTTCT	2509	False	NA	-6	True	AATAAA	-13	NA	126859862	126856135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126856509_126858529_126858641_126859776
ES.31976.4	chr7	-	3701	1	NIC	ENSMUSG00000042462.5	novel	676	3	NA	NA	45	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCTCGATTTTTCT	2535	False	NA	-6	True	AATAAA	-13	NA	126859836	126856135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_126856100_126859800
ES.31977.1	chr7	+	90	1	Intergenic	novelGene_26198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAG	62	False	NA	NA	False	AATAAA	-6	NA	126863496	126863586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_126863500_126863600
ES.31978.1	chr7	-	182	1	Intergenic	novelGene_26199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAACAAAACCAG	8590	False	NA	NA	False	NA	NA	NA	126867478	126867296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126867300_126867500
ES.31979.1	chr7	-	3222	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	-2	-1043	-2	1043	mono-exon	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCCCAGGAAGCAGCCA	2839	False	NA	NA	False	NA	NA	NA	126873229	126870007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126870000_126873200
ES.31979.2	chr7	-	2229	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	-45	-7	-45	7	mono-exon	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTGGTTCTGTGGA	2796	False	NA	-1	True	AATAAA	-26	NA	126873272	126871043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126871000_126873300
ES.3198.1	chr10	-	285	2	Antisense	novelGene_ENSMUSG00000069581.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCGGAGCAGAGAGGTC	2622	False	NA	NA	False	AATAAA	-39	NA	77566052	77565682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_77565751_77565835
ES.3198.2	chr10	-	261	1	Intergenic	novelGene_2511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATATAACAATAGATAAAT	2621	False	NA	NA	False	AATAAA	-16	NA	77566053	77565792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77565800_77566100
ES.31980.1	chr7	-	194	1	Intergenic	novelGene_26200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACATAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	126886738	126886544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126886500_126886700
ES.31981.1	chr7	+	5087	31	NNC	ENSMUSG00000030830.19	novel	5195	31	NA	NA	-24	-9	intron_retention	TRUE	canonical	0	0	junction_1	3.82738669184195	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCAGCTTATGGGG	NA	False	NA	NA	False	AATAAA	-8	NA	126895557	126934300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126895696_126896789_126896890_126898705_126898801_126898909_126898978_126900061_126900180_126900295_126900427_126901182_126901332_126904104_126904238_126904377_126904529_126905819_126905894_126905985_126906119_126909356_126909509_126909797_126909936_126910389_126910588_126910714_126910846_126913230_126913392_126913483_126913636_126916448_126916539_126921066_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927827_126927927_126928596_126928693_126929300_126929412_126932623
ES.31981.2	chr7	+	5004	31	NNC	ENSMUSG00000030830.19	novel	330	2	NA	NA	-77	-9	intron_retention	FALSE	canonical	0	0	junction_7	3.76592913133296	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCAGCTTATGGGG	NA	False	NA	NA	False	AATAAA	-8	NA	126896524	126934300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_126896580_126896789_126896890_126898705_126898801_126898909_126898978_126900061_126900180_126900295_126900427_126901182_126901332_126904104_126904238_126904377_126904529_126905819_126905894_126905985_126906119_126909356_126909509_126909797_126909936_126910389_126910588_126910714_126910846_126913230_126913392_126913483_126913636_126916448_126916539_126921066_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927827_126927927_126928596_126928693_126929300_126929412_126932623
ES.31981.3	chr7	+	2445	16	ISM	ENSMUSG00000030830.19	ENSMUST00000106306.9	5195	31	17265	1249	4038	161	3prime_fragment	FALSE	canonical	1	2	junction_1	3.03021818063027	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGACCCAGTAATAC	NA	False	NA	NA	False	AATAAA	-16	NA	126912727	126933061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126913392_126913483_126913636_126916448_126916539_126921066_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927824_126927927_126928596_126928693_126929300_126929412_126932623
ES.31981.4	chr7	+	3190	16	ISM	ENSMUSG00000030830.19	ENSMUST00000118405.2	3909	21	4538	0	4538	0	3prime_fragment	FALSE	canonical	1	2	junction_1	3.10268700752536	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATGGGGAAAGGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	126913227	126934309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126913392_126913483_126913636_126916448_126916536_126921066_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927824_126927927_126928596_126928693_126929300_126929412_126932623
ES.31981.5	chr7	+	4717	13	ISM	ENSMUSG00000030830.19	ENSMUST00000118405.2	3909	21	9214	1233	9214	176	3prime_fragment	FALSE	canonical	1	2	junction_8	2.9568658332017	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCCAGCCTTCCCAAC	NA	False	NA	NA	False	AATAAA	-31	NA	126917903	126933076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_126921121_126921223_126921295_126921652_126921795_126923716_126923828_126924193_126924274_126924368_126924456_126926880_126926957_126927358_126927473_126927670_126927728_126927824_126927927_126928596_126928693_126929300_126929412_126932623
ES.31982.1	chr7	-	2220	1	Antisense	novelGene_ENSMUSG00000030830.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTAGAGCTGTGGGA	NA	False	NA	NA	False	AAAACA	-13	NA	126933720	126931500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_126931500_126933700
ES.31983.1	chr7	-	2542	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	-188	2	-22	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTCGTCCTTAAGAT	5133	False	NA	-3	True	AATAAA	-14	NA	126944783	126941968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126944048_126944320
ES.31984.1	chr7	-	3543	1	Genic_Genomic	ENSMUSG00000054381.6	novel	NA	NA	NA	NA	-24	5	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGCTCCTCATTTG	891	False	NA	NA	False	CATAAA	-1	NA	126975246	126971703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_126971700_126975200
ES.31984.2	chr7	-	2712	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	-23	-5	-23	5	multi-exon	FALSE	canonical	3	22	junction_2	4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGCTCCTCATTTG	892	False	NA	NA	False	CATAAA	-1	NA	126975245	126971703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126973871_126974560_126974675_126974814
ES.31984.4	chr7	-	1904	5	Fusion	ENSMUSG00000030823.7_ENSMUSG00000054381.6	novel	3878	3	NA	NA	256	-452	multi-exon	TRUE	non_canonical	0	0	junction_1	2.59807621135332	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTGTAATTAATTAC	NA	False	NA	NA	False	AATAAA	-14	NA	126986029	126972160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126972211_126982977_126984370_126984538_126984803_126985691_126985806_126985945
ES.31984.5	chr7	-	2227	3	Fusion	ENSMUSG00000078580.4_ENSMUSG00000054381.6	novel	3324	3	NA	NA	-19	-461	intron_retention	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTCTAAATAACTGTA	9124	False	NA	NA	False	AATAAA	-5	NA	126992820	126972169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_126972376_126990314_126991688_126992172
ES.31984.6	chr7	-	5497	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	-12	-1607	-12	1607	multi-exon	FALSE	canonical	2	4	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACATTCACCCGTCT	NA	False	NA	NA	False	NA	NA	NA	126986350	126979824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126984803_126985691_126985806_126985945
ES.31984.7	chr7	-	2850	3	NNC	ENSMUSG00000030823.7	novel	3878	3	NA	NA	-12	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTGTATTGTATGTTA	NA	False	NA	NA	False	CATAAA	-13	NA	126986350	126982495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_126984803_126985691_126985830_126985945
ES.31984.8	chr7	-	2699	3	FSM	ENSMUSG00000030823.7	ENSMUST00000164345.2	2735	3	-53	89	0	-89	multi-exon	FALSE	canonical	0	0	junction_2	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAGAAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	126986338	126982536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126984803_126985691_126985806_126986019
ES.31984.9	chr7	-	2745	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	28	1105	-25	-89	multi-exon	FALSE	canonical	2	4	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAAGAAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	126986310	126982536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_126984803_126985691_126985806_126985945
ES.31985.1	chr7	-	177	1	Intergenic	novelGene_26201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACCTTCACCA	4448	False	NA	NA	False	NA	NA	NA	126999326	126999149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_126999100_126999300
ES.31986.1	chr7	-	2404	3	FSM	ENSMUSG00000045757.7	ENSMUST00000059199.7	2508	3	109	-5	70	5	multi-exon	FALSE	canonical	2	4	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGCTCCTCATTTG	8710	False	NA	NA	False	AATAAA	-24	NA	127005885	127002834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127004832_127005337_127005452_127005592
ES.31986.2	chr7	-	2425	3	FSM	ENSMUSG00000045757.7	ENSMUST00000139118.2	2405	3	-20	0	19	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAGAAACAA	8620	False	NA	NA	False	TATAAA	-19	NA	127005975	127002866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127004832_127005337_127005452_127005629
ES.31986.3	chr7	-	2168	3	NNC	ENSMUSG00000045757.7	novel	2405	3	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAGAAACAA	8681	False	NA	NA	False	TATAAA	-19	NA	127005914	127002866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127004832_127005337_127005452_127005825
ES.31987.1	chr7	-	1136	4	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	12	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	9.62635271879577	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTTTGTGTTAAGAAAA	6896	False	NA	-1	True	ATTAAA	-20	NA	127021228	127018135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020980
ES.31987.2	chr7	-	2985	2	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	-14	2	intron_retention	FALSE	canonical	3	9	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTTTTGTGTTAAGAAA	6899	False	NA	-2	True	ATTAAA	-19	NA	127021225	127018136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127020691_127020794
ES.31987.3	chr7	-	1020	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	-5	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	-1	True	NA	-4	True	ATTAAA	-17	NA	127021211	127018138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127018814_127020576_127020691_127020980
ES.31987.4	chr7	-	3060	1	NIC	ENSMUSG00000045251.14	novel	1298	2	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGTTTTGTGTTAAG	6925	False	NA	-5	True	ATTAAA	-16	NA	127021199	127018139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127018100_127021200
ES.31987.5	chr7	-	1197	3	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	12.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6920	False	NA	-6	True	ATTAAA	-15	NA	127021204	127018140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127018814_127020576_127020691_127020794
ES.31987.6	chr7	-	1272	4	FSM	ENSMUSG00000045251.14	ENSMUST00000148483.8	1302	4	28	2	16	0	multi-exon	FALSE	canonical	3	9	junction_3	18.7794213613377	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	-6	True	NA	-6	True	ATTAAA	-15	NA	127021183	127018140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127018814_127019181_127019278_127020576_127020691_127020794
ES.31987.7	chr7	-	1162	3	NNC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6930	False	NA	-6	True	ATTAAA	-15	NA	127021194	127018140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127018814_127020576_127020691_127020819
ES.31988.1	chr7	+	162	1	Intergenic	novelGene_26202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGGTGACATAGC	7146	False	NA	NA	False	NA	NA	NA	127028588	127028750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127028600_127028800
ES.31989.1	chr7	+	177	2	Intergenic	novelGene_26204	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127033107	127058021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127033165_127057901
ES.31989.10	chr7	+	1135	2	Intergenic	novelGene_26206	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTTGTCTTGGTTTCAT	9835	False	NA	NA	False	NA	NA	NA	127061552	127066297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127062544_127066153
ES.31989.11	chr7	+	959	1	Intergenic	novelGene_26207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGTGGTGGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	127064125	127065084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127064100_127065100
ES.31989.12	chr7	+	242	1	Intergenic	novelGene_26208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCATTTCCAGCTCTC	NA	False	NA	NA	False	NA	NA	NA	127066094	127066336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127066100_127066300
ES.31989.13	chr7	+	2513	10	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	224	-3	intron_retention	FALSE	canonical	2	7	junction_1	70.5792611095174	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTTCTGACTCCT	NA	False	NA	2	True	TATAAA	-7	NA	127069766	127075924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127070292_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127075171_127075393_127075466_127075555
ES.31989.14	chr7	+	2052	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-2	22	combination_of_known_junctions	FALSE	canonical	2	49	junction_11	69.1986002820269	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGAGTTTGAAATCAAT	NA	False	NA	31	True	TATAAA	-36	NA	127070188	127075953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
ES.31989.15	chr7	+	2288	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	-9	23	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	65.961797107765	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTTTGAAATCAATT	NA	False	NA	32	True	TATAAA	-37	NA	127070214	127075954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127070292_127070876_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ES.31989.16	chr7	+	2148	9	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	43	-1	intron_retention	FALSE	canonical	2	7	junction_1	73.7740426911797	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGACTCCTTTGT	NA	False	NA	6	True	TATAAA	-11	NA	127070266	127075928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127070292_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127075171_127075393_127075466_127075555
ES.31989.17	chr7	+	2579	11	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-194	1	combination_of_known_junctions	FALSE	canonical	2	49	junction_10	56.3490017657811	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACTCCTTTGTGCCT	NA	False	NA	10	True	TATAAA	-15	NA	127070426	127075932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
ES.31989.18	chr7	+	2612	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	-186	-24	-145	23	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTTTGAAATCAATT	NA	False	NA	32	True	TATAAA	-37	NA	127070475	127075954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ES.31989.19	chr7	+	2651	10	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-120	7	intron_retention	FALSE	canonical	3	200	junction_9	16.7980010568571	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTGTGCCTCCAGCA	NA	False	NA	16	True	TATAAA	-21	NA	127070500	127075938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127075171_127075393_127075466_127075555
ES.31989.2	chr7	+	178	1	Intergenic	novelGene_26203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	127033107	127033285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127033100_127033300
ES.31989.20	chr7	+	2657	10	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-84	0	intron_retention	FALSE	canonical	3	200	junction_9	18.4477908610847	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070536	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074999_127075078_127075171_127075393_127075466_127075555
ES.31989.21	chr7	+	2010	12	NNC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.3522871067672	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070645	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127070671_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ES.31989.22	chr7	+	2714	8	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	203	junction_3	16.0839633657572	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070649	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127075171_127075393
ES.31989.23	chr7	+	2624	9	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	200	junction_8	17.3525034216968	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070649	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127075171_127075393_127075466_127075555
ES.31989.24	chr7	+	2963	8	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	-10	7	intron_retention	FALSE	canonical	3	200	junction_7	18.5307246243109	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTGTGCCTCCAGCA	NA	False	NA	16	True	TATAAA	-21	NA	127070651	127075938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127075171_127075393_127075466_127075555
ES.31989.25	chr7	+	2741	8	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	203	junction_2	17.2413835327229	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070662	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074999_127075078_127075171_127075393
ES.31989.26	chr7	+	2418	11	NNC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.6099143180333	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGACTCCTTTGTGCCT	NA	False	NA	10	True	TATAAA	-15	NA	127070672	127075932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075530
ES.31989.27	chr7	+	2487	10	ISM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	25	-20	25	19	intron_retention	FALSE	canonical	3	203	junction_3	16.1229841308596	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCAGAGTTTGAAATC	NA	False	NA	28	True	TATAAA	-33	NA	127070686	127075950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393
ES.31989.28	chr7	+	2461	10	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	25	23	intron_retention	FALSE	canonical	2	49	junction_9	59.3857446418471	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTTTGAAATCAATT	NA	False	NA	32	True	TATAAA	-37	NA	127070686	127075954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
ES.31989.29	chr7	+	2126	10	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	86.5666089076948	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070686	127075929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
ES.31989.3	chr7	+	251	1	Genic_Genomic	ENSMUSG00000108483.2	novel	NA	NA	NA	NA	4799	79	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCCAGCACTTGGGA	NA	False	NA	NA	False	NA	NA	NA	127038392	127038643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_127038400_127038600
ES.31989.30	chr7	+	2707	10	NIC	ENSMUSG00000030822.16	novel	2402	11	NA	NA	25	-1	intron_retention	FALSE	canonical	3	200	junction_9	18.6607133363712	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTGACTCCTTTGT	NA	False	NA	6	True	TATAAA	-11	NA	127070686	127075928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ES.31989.4	chr7	+	4995	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	-25	-3192	-21	3192	multi-exon	FALSE	canonical	3	8	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGAAGGAAGCAGGCGC	878	False	NA	NA	False	NA	NA	NA	127047786	127062724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127048744_127058686
ES.31989.5	chr7	+	2887	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	-24	-1085	-20	1085	multi-exon	FALSE	canonical	3	8	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTACTAGGAACAGAG	879	False	NA	NA	False	NA	NA	NA	127047787	127060617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127048744_127058686
ES.31989.6	chr7	+	5342	1	NIC	ENSMUSG00000086502.2	novel	1142	2	NA	NA	22	-3182	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	925	False	NA	NA	False	NA	NA	NA	127047833	127053175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127047800_127053200
ES.31989.7	chr7	+	4998	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	200	-3420	200	3420	multi-exon	FALSE	canonical	3	8	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATGCTCTTTTGATTTT	1103	False	NA	NA	False	NA	NA	NA	127048011	127062952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127048744_127058686
ES.31989.8	chr7	+	205	1	Intergenic	novelGene_26205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAAACATTAGGCCTT	6127	False	NA	NA	False	NA	NA	NA	127057844	127058049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127057800_127058000
ES.31989.9	chr7	+	3868	14	Fusion	ENSMUSG00000086502.2_ENSMUSG00000030822.16	novel	2175	13	NA	NA	54	12	multi-exon	FALSE	canonical	0	0	junction_1	89.5411049041479	273	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCCTCCAGCAGAGTT	7119	False	NA	21	True	TATAAA	-26	NA	127058836	127075943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_127059978_127069415_127069596_127069743_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ES.3199.1	chr10	-	127	1	Intergenic	novelGene_2512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAATATACATACAC	NA	False	NA	NA	False	NA	NA	NA	77597005	77596878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77596900_77597000
ES.31990.1	chr7	-	3615	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	6	0	6	0	multi-exon	FALSE	canonical	3	47	junction_1	4.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTCCTTCTGGAA	4363	False	NA	NA	False	ATTAAA	-14	NA	127048324	127041307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127044310_127047534_127047649_127047825
ES.31990.2	chr7	-	2006	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	7	1608	7	11	multi-exon	FALSE	canonical	3	47	junction_1	4.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATATGGGTGTGTTC	4364	False	NA	8	True	ATTAAA	-23	NA	127048323	127042915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127044310_127047534_127047649_127047825
ES.31990.3	chr7	-	1863	4	NNC	ENSMUSG00000048921.12	novel	1417	4	NA	NA	19	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.5537958142705	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATATGGGTGTGTT	4376	False	NA	7	True	ATTAAA	-22	NA	127048311	127042916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127043898_127044027_127044310_127047534_127047649_127047825
ES.31991.1	chr7	-	3908	2	Antisense	novelGene_ENSMUSG00000030822.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTACTTATGCTCCATGG	NA	False	NA	NA	False	NA	NA	NA	127069767	127065677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127069017_127069198
ES.31991.2	chr7	-	4355	1	Antisense	novelGene_ENSMUSG00000030822.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127070054	127065699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127065700_127070100
ES.31991.3	chr7	-	2708	1	Antisense	novelGene_ENSMUSG00000030822.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	127070740	127068032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127068000_127070700
ES.31991.4	chr7	-	1688	3	Antisense	novelGene_ENSMUSG00000030822.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCGTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	127070054	127068034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127069015_127069196_127069639_127069788
ES.31991.5	chr7	-	1394	7	Antisense	novelGene_ENSMUSG00000030822.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.372677996249965	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGAACTCAGTCCGGAT	NA	False	NA	NA	False	NA	NA	NA	127074273	127070537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127071144_127071262_127071438_127072765_127072887_127072966_127073157_127073548_127073593_127073683_127073889_127074220
ES.31992.1	chr7	+	5583	13	NNC	ENSMUSG00000042423.10	novel	2650	11	NA	NA	-1049	2057	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.4359820918887	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTGTCTTCCAACATA	NA	False	NA	NA	False	AATAAA	-28	NA	127077321	127092940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127077733_127083926_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.11	chr7	+	4200	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-338	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	9.01301142793018	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACCCCCTACCCTCCGG	NA	False	NA	24	True	TATAAA	-18	NA	127078032	127090673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.12	chr7	+	4009	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-273	-625	intron_retention	FALSE	canonical	3	16	junction_6	6.51800391224184	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTTCCTAGCCTCTG	NA	False	NA	3	True	ATTAAA	-13	NA	127078097	127090049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.13	chr7	+	4309	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-167	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.41325528178217	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCCGGCTCCTCTTTGA	NA	False	NA	35	True	TATAAA	-29	NA	127078203	127090684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.14	chr7	+	3875	17	ISM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	808	-227	-8	22	3prime_fragment	FALSE	canonical	3	16	junction_5	6.71722366383612	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTATTTGGTGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127079178	127090905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.15	chr7	+	4964	4	NIC	ENSMUSG00000042423.10	novel	2627	7	NA	NA	-77	1	intron_retention	FALSE	canonical	3	30	junction_3	3.39934634239519	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCCTACCCTCCGGCT	483	False	NA	26	True	TATAAA	-20	NA	127084315	127090675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127086955_127087045_127087127_127088338_127088768_127088860
ES.31992.16	chr7	+	2732	1	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	153	578	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGAGGATCCCACGTA	1139	False	NA	NA	False	NA	NA	NA	127084971	127087703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127085000_127087700
ES.31992.17	chr7	+	3481	5	NIC	ENSMUSG00000042423.10	novel	2627	7	NA	NA	-543	-3	intron_retention	FALSE	canonical	3	30	junction_4	3.34477204006491	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCTCCGGCTCCTCTTT	1645	False	NA	33	True	TATAAA	-27	NA	127085477	127090682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127086509_127086836_127086955_127087045_127087127_127088338_127088768_127088860
ES.31992.18	chr7	+	176	2	Intergenic	novelGene_26209	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3674	False	NA	NA	False	NA	NA	NA	127087506	127107958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127087540_127107815
ES.31992.19	chr7	+	209	2	Intergenic	novelGene_26210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATAAAGATTTAAA	8617	False	NA	NA	False	NA	NA	NA	127101080	127107989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127101088_127107787
ES.31992.2	chr7	+	3148	13	NNC	ENSMUSG00000042423.10	novel	2650	11	NA	NA	-1038	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.4359820918887	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACCCTCCGGCTCCTCT	NA	False	NA	31	True	TATAAA	-25	NA	127077332	127090680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127077581_127083938_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.20	chr7	+	239	1	Intergenic	novelGene_26211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATCAAAGCTGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	127107778	127108017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127107800_127108000
ES.31992.3	chr7	+	5211	18	FSM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	-1038	-7	-1038	0	multi-exon	FALSE	canonical	3	16	junction_6	6.52702659137892	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCGGCTCCTCTTTGAG	NA	False	NA	36	True	TATAAA	-30	NA	127077332	127090685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.4	chr7	+	4315	18	NNC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-1014	-624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8.85250145478217	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCTAGCCTCTGG	NA	False	NA	4	True	ATTAAA	-14	NA	127077356	127090050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082231_127083787_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.5	chr7	+	5064	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-998	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	8.78364068880325	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCCCTACCCTCCGGC	NA	False	NA	25	True	TATAAA	-19	NA	127077372	127090674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.6	chr7	+	5046	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-678	1	intron_retention	FALSE	canonical	2	3	junction_11	8.64580823289529	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCCCCTACCCTCCGGCT	NA	False	NA	26	True	TATAAA	-20	NA	127077692	127090675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084862_127085099_127085169_127086031_127086071_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.7	chr7	+	4773	18	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-673	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	9.10682469664171	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTACCCTCCGGCTCCT	NA	False	NA	29	True	TATAAA	-23	NA	127077697	127090678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088625_127088768_127088860
ES.31992.8	chr7	+	4740	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-384	-2	intron_retention	FALSE	canonical	3	16	junction_6	6.16314651781053	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTACCCCCTACCCTCCG	NA	False	NA	23	True	TATAAA	-17	NA	127077986	127090672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31992.9	chr7	+	4104	17	NIC	ENSMUSG00000042423.10	novel	4166	18	NA	NA	-370	-624	intron_retention	FALSE	canonical	3	16	junction_6	6.16314651781053	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCTAGCCTCTGG	NA	False	NA	4	True	ATTAAA	-14	NA	127078000	127090050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ES.31993.1	chr7	+	2803	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	24	77	5	-77	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGACCTTTATACCA	NA	False	NA	NA	False	NA	NA	NA	127111178	127126135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
ES.31993.10	chr7	+	3684	9	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	23	-1	intron_retention	FALSE	canonical	3	20	junction_8	13.629013170439	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCAGTTATTGAGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	127111221	127128493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127113336_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
ES.31993.11	chr7	+	10651	33	NIC	ENSMUSG00000053877.13	novel	9633	31	NA	NA	23	0	intron_retention	FALSE	canonical	3	15	junction_20	13.5775765855877	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTAAGGAGGCTTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	127111221	127160391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ES.31993.12	chr7	+	2303	7	NIC	ENSMUSG00000053877.13	novel	2904	8	NA	NA	-5	-401	intron_retention	FALSE	canonical	2	9	junction_1	17.8644588188081	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTTGTGTAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	127111278	127125811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
ES.31993.13	chr7	+	1901	9	NIC	ENSMUSG00000053877.13	novel	4025	21	NA	NA	46	-2	intron_retention	FALSE	canonical	0	0	junction_1	19.9874960913067	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTTCAGTTATTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	127111518	127128492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111803_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
ES.31993.14	chr7	+	1666	4	ISM	ENSMUSG00000053877.13	ENSMUST00000186672.7	4025	21	-17	18509	-17	758	5prime_fragment	FALSE	canonical	2	5	junction_1	26.2424592343528	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATATTTCTTCTTCT	NA	False	NA	NA	False	AATAAA	-8	NA	127111619	127119899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752
ES.31993.15	chr7	+	10538	33	NIC	ENSMUSG00000053877.13	novel	9633	31	NA	NA	-7	0	intron_retention	FALSE	canonical	2	5	junction_1	13.3941160122645	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTAAGGAGGCTTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	127111629	127160391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ES.31993.16	chr7	+	1862	10	ISM	ENSMUSG00000053877.13	ENSMUST00000186672.7	4025	21	-1	9914	-1	0	5prime_fragment	FALSE	canonical	2	5	junction_1	18.4571575998762	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTTATTGAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	127111635	127128494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127111803_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
ES.31993.17	chr7	+	177	1	Intergenic	novelGene_26212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	127118320	127118497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127118300_127118500
ES.31993.18	chr7	+	3309	1	NIC	ENSMUSG00000053877.13	novel	2904	8	NA	NA	5378	-489	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127120697	127124006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127120700_127124000
ES.31993.19	chr7	+	9593	28	ISM	ENSMUSG00000053877.13	ENSMUST00000190390.7	9633	31	5839	-450	5839	0	3prime_fragment	FALSE	canonical	3	15	junction_15	8.75312995165828	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTAAGGAGGCTTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	127121158	127160391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ES.31993.2	chr7	+	1684	8	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	-7	6	intron_retention	FALSE	canonical	0	0	junction_1	19.3369689286335	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTGAGTATTATGTGC	NA	False	NA	NA	False	AATAAA	-25	NA	127111191	127128500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
ES.31993.20	chr7	+	8712	23	ISM	ENSMUSG00000053877.13	ENSMUST00000187040.7	10654	34	17483	1	-3259	-1	3prime_fragment	FALSE	canonical	2	2	junction_11	8.82146143324233	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGTAAGGAGGCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	127129672	127160390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139422_127139606_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ES.31993.21	chr7	+	5299	15	ISM	ENSMUSG00000053877.13	ENSMUST00000190390.7	9633	31	14475	10004	-3137	-10004	internal_fragment	FALSE	canonical	3	15	junction_9	6.5203762255294	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGTTGTTATACAGAC	NA	False	NA	NA	False	ATTAAA	-16	NA	127129794	127149937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704
ES.31993.22	chr7	+	8870	22	NNC	ENSMUSG00000107023.3	novel	12746	31	NA	NA	12593	-1783	intron_retention	FALSE	canonical	0	0	junction_5	30.5737278470768	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTAATTGCTCTTTT	NA	False	NA	18	True	AATAAA	-21	NA	127131348	127164443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137781_127137915_127137941_127138120_127138409_127138928_127139094_127139422_127139606_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139_127160958_127162293_127162465_127163955
ES.31993.23	chr7	+	6771	13	NNC	ENSMUSG00000053877.13	novel	9633	31	NA	NA	5206	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	9.00424282707263	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCGTGTAAGGAGGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	127138137	127160388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148572_127148701_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ES.31993.24	chr7	+	6847	15	NIC	ENSMUSG00000107023.3	novel	12746	31	NA	NA	20198	-1783	intron_retention	FALSE	canonical	1	1	junction_12	34.5185546082813	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTAATTGCTCTTTT	NA	False	NA	18	True	AATAAA	-21	NA	127138953	127164443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139_127159865_127160723_127160958_127162293_127162465_127163955
ES.31993.25	chr7	+	5709	13	NNC	ENSMUSG00000107023.3	novel	12746	31	NA	NA	-18122	-1786	intron_retention	FALSE	canonical	0	0	junction_10	36.1985266735172	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTGTCTAATTGCTCT	NA	False	NA	15	True	AATAAA	-18	NA	127141134	127164440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139_127159865_127160730_127160958_127162293_127162465_127163955
ES.31993.26	chr7	+	6416	6	ISM	ENSMUSG00000107023.3	ENSMUST00000189629.5	12746	31	33350	1783	-7151	-1783	intron_retention	FALSE	canonical	3	23	junction_3	36.7390800102561	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTAATTGCTCTTTT	NA	False	NA	18	True	AATAAA	-21	NA	127152105	127164443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139_127160958_127162293
ES.31993.27	chr7	+	3793	6	Fusion	ENSMUSG00000106715.4_ENSMUSG00000053877.13	novel	1054	3	NA	NA	-3851	-4	intron_retention	FALSE	canonical	0	0	junction_3	51.0317548199158	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATATTGTCTAATTGCT	NA	False	NA	13	True	AATAAA	-16	NA	127156710	127164438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_127156781_127156937_127157022_127157139_127159898_127160730_127160958_127162293_127162465_127163955
ES.31993.28	chr7	+	3381	1	ISM	ENSMUSG00000107023.3	ENSMUST00000189629.5	12746	31	38432	5658	-2069	-1808	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCAAATCTGATCTGG	NA	False	NA	NA	False	NA	NA	NA	127157187	127160568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127157200_127160600
ES.31993.29	chr7	+	2877	2	NNC	ENSMUSG00000107023.3	novel	925	3	NA	NA	-1829	-1988	intron_retention	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCGTGTAAGGAGGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	127157427	127160388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127157468_127157551
ES.31993.3	chr7	+	1810	4	ISM	ENSMUSG00000053877.13	ENSMUST00000189136.7	1960	6	18	2102	-7	766	5prime_fragment	FALSE	canonical	3	58	junction_2	2.05480466765633	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTTCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	127111191	127119907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752
ES.31993.4	chr7	+	2657	6	FSM	ENSMUSG00000053877.13	ENSMUST00000189136.7	1960	6	18	-715	-7	715	multi-exon	FALSE	canonical	3	43	junction_5	7.08237248385031	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGCCTGGAGGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	127111191	127122724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160
ES.31993.5	chr7	+	2008	10	NIC	ENSMUSG00000053877.13	novel	2048	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	20	junction_9	13.2282899242868	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTTCAGTTATTGAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	127111195	127128492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306
ES.31993.6	chr7	+	6039	24	NIC	ENSMUSG00000053877.13	novel	9633	31	NA	NA	-2	3439	intron_retention	FALSE	canonical	3	15	junction_20	15.5440711349381	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCCACCACCTCGTTCC	NA	False	NA	NA	False	NA	NA	NA	127111196	127141847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413
ES.31993.7	chr7	+	2458	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	45	401	1	-401	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTTGTGTAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	127111199	127125811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
ES.31993.8	chr7	+	1723	3	NIC	ENSMUSG00000053877.13	novel	1960	6	NA	NA	3	765	intron_retention	FALSE	canonical	2	9	junction_1	27	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	127111201	127119906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127111511_127115113_127115374_127118752
ES.31993.9	chr7	+	11057	36	NNC	ENSMUSG00000107023.3	novel	12746	31	NA	NA	-7541	-1783	intron_retention	FALSE	canonical	2	2	junction_33	24.9334788456593	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTAATTGCTCTTTT	NA	False	NA	18	True	AATAAA	-21	NA	127111214	127164443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139_127159898_127160723_127160958_127162293_127162465_127163955
ES.31994.1	chr7	-	3054	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	-36	-586	-36	586	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGCTGGCTCAGGCTA	9965	False	NA	NA	False	NA	NA	NA	127112077	127109023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127109000_127112100
ES.31994.2	chr7	-	1862	2	Genic_Genomic	ENSMUSG00000101225.2	novel	2432	1	NA	NA	21	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTAGTATGAA	9997	False	NA	NA	False	AATAAA	-14	NA	127112020	127109652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127111317_127111822
ES.31994.3	chr7	-	1558	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	13	861	13	-861	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGCTGGGTGGTGG	9989	False	NA	NA	False	NA	NA	NA	127112028	127110470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127110500_127112000
ES.31995.1	chr7	-	3728	1	Antisense	novelGene_ENSMUSG00000053877.13_AS_novelGene_ENSMUSG00000107023.3_AS_novelGene_ENSMUSG00000065259.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAGCAACATAAACACAA	9812	False	NA	NA	False	NA	NA	NA	127128005	127124277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127124300_127128000
ES.31996.1	chr7	-	4106	3	Antisense	novelGene_ENSMUSG00000107023.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAGA	4861	False	NA	NA	False	NA	NA	NA	127157767	127153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127156779_127156935_127157022_127157139
ES.31997.1	chr7	-	4833	1	Antisense	novelGene_ENSMUSG00000107023.3_AS_novelGene_ENSMUSG00000106715.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATGTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127169492	127164659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127164700_127169500
ES.31997.2	chr7	-	5659	1	Genic_Genomic	ENSMUSG00000101845.2	novel	NA	NA	NA	NA	-32	-8348	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACTAGACTTGGACTGA	NA	False	NA	NA	False	NA	NA	NA	127172320	127166661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127166700_127172300
ES.31997.3	chr7	-	161	1	Intergenic	novelGene_26213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	127167998	127167837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127167800_127168000
ES.31997.4	chr7	-	1492	1	Genic_Genomic	ENSMUSG00000101845.2	novel	NA	NA	NA	NA	-34	-12517	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTCAGTATGCCCT	NA	False	NA	NA	False	AATAAA	-21	NA	127172322	127170830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127170800_127172300
ES.31998.1	chr7	+	2019	3	FSM	ENSMUSG00000030815.12	ENSMUST00000151908.8	1918	3	-70	-31	-6	31	multi-exon	FALSE	canonical	3	119	junction_1	14	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTCCATCCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	127172505	127178489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127172629_127173025_127173139_127176706
ES.31998.10	chr7	+	1566	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	41.019621829071	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172522	127182477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127176883_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.11	chr7	+	1878	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	12	-1	intron_retention	FALSE	canonical	3	65	junction_3	23.0475052879916	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172523	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.12	chr7	+	3594	7	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	12	1	intron_retention	FALSE	canonical	3	113	junction_3	10.9607886983049	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGCCATGTCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	127172523	127182473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.13	chr7	+	3514	8	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	12	-2	intron_retention	FALSE	canonical	3	106	junction_3	12.7022414862697	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGTGCCATGTCTG	NA	False	NA	17	True	AATAAA	-18	NA	127172523	127182470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.14	chr7	+	3231	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	46	junction_3	28.615719019448	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCCAGTGCCATGTCT	NA	False	NA	16	True	AATAAA	-17	NA	127172541	127182469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.15	chr7	+	1682	10	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	44.4058165470457	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGTGCCATGTCTG	NA	False	NA	17	True	AATAAA	-18	NA	127172563	127182470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127172916_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.16	chr7	+	3582	8	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	7	junction_1	43.3613201094322	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172565	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127172916_127173139_127176706_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.17	chr7	+	3643	7	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	7	junction_1	46.1362715827315	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172575	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127172916_127173139_127176706_127178905_127178981_127179146_127181294_127181386_127181465_127181817_127181907
ES.31998.18	chr7	+	2320	2	ISM	ENSMUSG00000030815.12	ENSMUST00000138158.8	1246	6	-214	3083	24	29	5prime_fragment	FALSE	canonical	3	147	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAATTCCATCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	127172599	127178487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127173139_127176706
ES.31998.19	chr7	+	1658	7	NIC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.3693562175296	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172761	127182477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127173139_127176706_127176883_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.2	chr7	+	1521	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTGCTGTCTAGTT	NA	False	NA	27	True	AATAAA	-28	NA	127172506	127182480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.20	chr7	+	2037	8	NIC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	65	junction_2	24.628670864897	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172761	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.21	chr7	+	1653	8	NIC	ENSMUSG00000030815.12	novel	1722	9	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	35.729139768142	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172762	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.22	chr7	+	3645	7	NIC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	106	junction_2	13.4866188827626	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGTGCCATGTCTG	NA	False	NA	17	True	AATAAA	-18	NA	127172789	127182470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127173139_127176706_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.23	chr7	+	3922	1	NIC	ENSMUSG00000030815.12	novel	819	7	NA	NA	1752	29	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAATTCCATCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	127174565	127178487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127174600_127178500
ES.31998.24	chr7	+	141	1	Intergenic	novelGene_26214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	127175084	127175225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127175100_127175200
ES.31998.25	chr7	+	4063	2	NIC	ENSMUSG00000030815.12	novel	976	5	NA	NA	-134	-1	intron_retention	FALSE	canonical	3	126	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127178317	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127181817_127181907
ES.31998.26	chr7	+	1301	3	ISM	ENSMUSG00000030815.12	ENSMUST00000133621.2	834	4	502	-892	502	4	3prime_fragment	FALSE	canonical	3	113	junction_1	11	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGCTGTCTAGTTTCA	NA	False	NA	30	True	AATAAA	-31	NA	127178953	127182483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127179146_127181294_127181386_127181465
ES.31998.3	chr7	+	3724	7	NIC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	-5	0	intron_retention	FALSE	canonical	2	7	junction_1	46.8202828792062	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172506	127182477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127172916_127173139_127176706_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.4	chr7	+	2007	9	NNC	ENSMUSG00000030815.12	novel	1840	9	NA	NA	7	0	intron_retention	FALSE	canonical	2	4	junction_7	52.7125163030565	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172518	127182477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127172629_127172916_127173139_127176706_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181681_127181817_127181907
ES.31998.5	chr7	+	1539	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	38.180492401225	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCAGTGCCATGTCTG	NA	False	NA	17	True	AATAAA	-18	NA	127172520	127182470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127176861_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.6	chr7	+	3869	5	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	9	-1	intron_retention	FALSE	canonical	2	7	junction_1	52.1554167848365	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172520	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127172916_127173139_127176706_127178905_127178981_127179146_127181294
ES.31998.7	chr7	+	1553	10	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	38.5313724991294	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	False	NA	18	True	AATAAA	-19	NA	127172520	127182471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.8	chr7	+	1623	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	-53	0	11	0	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172522	127182479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ES.31998.9	chr7	+	2111	3	FSM	ENSMUSG00000030815.12	ENSMUST00000129457.2	1426	3	11	-696	11	31	multi-exon	FALSE	canonical	2	7	junction_1	70	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTCCATCCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	127172522	127178489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127172629_127172916_127173139_127176706
ES.31999.1	chr7	-	3451	6	ISM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	421	-2	-5	2	intron_retention	FALSE	canonical	3	15	junction_4	4.48998886412873	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCGTAGCATCAGGAT	8707	False	NA	NA	False	AGTAAA	-20	NA	127187346	127181552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446
ES.31999.2	chr7	-	1423	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	410	703	-16	274	multi-exon	FALSE	canonical	3	15	junction_4	3.80788655293195	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTCCTCCTGG	8696	False	NA	NA	False	NA	NA	NA	127187357	127182257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
ES.31999.3	chr7	-	3459	3	ISM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	465	979	39	-2	intron_retention	FALSE	canonical	3	22	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCACGAGCACCTTCTG	8751	False	NA	-6	True	AATAAA	-28	NA	127187302	127182533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127182762_127183992_127184086_127184164
ES.31999.4	chr7	-	3500	5	NIC	ENSMUSG00000057176.5	novel	2536	9	NA	NA	51	-3	intron_retention	FALSE	canonical	3	22	junction_2	2.04633819296811	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCACGAGCACCTTCT	8337	False	NA	-7	True	AATAAA	-27	NA	127187716	127182534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127186768_127187048
ES.31999.5	chr7	-	1051	8	NNC	ENSMUSG00000057176.5	novel	2536	9	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.90310654336165	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTCACGAGCACCTTC	8710	False	NA	-8	True	AATAAA	-26	NA	127187343	127182535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127182762_127183992_127184086_127184164_127184226_127184588_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
ES.32.1	chr1	-	177	1	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGGAAGATATAAAA	NA	False	NA	NA	False	NA	NA	NA	6278448	6278271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6278300_6278400
ES.320.1	chr1	+	1489	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	5	-9	-5	multi-exon	FALSE	canonical	3	65	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTGTGTCCTTTTCCT	NA	False	NA	10	True	ATTAAA	-10	NA	37911277	37915304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37911407_37913944
ES.320.2	chr1	+	4238	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	-9	-2744	-9	2744	multi-exon	FALSE	canonical	3	65	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTTGCTATGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	37911277	37918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37911407_37913944
ES.320.3	chr1	+	2640	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	8	-1163	8	1163	multi-exon	FALSE	canonical	3	65	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAGGTCTCTACTCAAT	NA	False	NA	NA	False	NA	NA	NA	37911294	37916472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37911407_37913944
ES.320.4	chr1	+	1320	3	NNC	ENSMUSG00000037216.6	novel	1485	2	NA	NA	22	2742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGCTTTGCTATGGT	NA	False	NA	NA	False	AATAAA	-17	NA	37911308	37918051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37911407_37913944_37914916_37917800
ES.320.5	chr1	+	3903	1	NIC	ENSMUSG00000037216.6	novel	1485	2	NA	NA	-54	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAACTGTGTCCTTTTCC	NA	False	NA	9	True	ATTAAA	-9	NA	37911400	37915303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37911400_37915300
ES.320.6	chr1	+	3156	2	FSM	ENSMUSG00000037216.6	ENSMUST00000142670.2	812	2	-45	-2299	-45	1531	multi-exon	TRUE	canonical	1	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCCATTGGCTC	NA	False	NA	NA	False	AATAAA	-21	NA	37911409	37916840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37911670_37913944
ES.320.7	chr1	+	1605	2	FSM	ENSMUSG00000037216.6	ENSMUST00000142670.2	812	2	-31	-762	-31	-6	multi-exon	FALSE	canonical	1	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAACTGTGTCCTTTTCC	NA	False	NA	9	True	ATTAAA	-9	NA	37911423	37915303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37911670_37913944
ES.320.8	chr1	+	4611	2	NNC	ENSMUSG00000037216.6	novel	812	2	NA	NA	-30	2739	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATATTTGCTTTGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	37911424	37918048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_37911932_37913944
ES.3200.1	chr10	-	178	1	Intergenic	novelGene_2513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGGGGGGGAGGATAT	9926	False	NA	NA	False	NA	NA	NA	77597190	77597012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77597000_77597200
ES.32000.1	chr7	+	4175	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	-88	1192	-88	13	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCTAACCTGAGTCTC	NA	False	NA	34	True	AATAAA	-35	NA	127187850	127202779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.12	chr7	+	3825	17	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-9	-1985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.1622394792626	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGGGTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	127187929	127197790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189890_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588
ES.32000.13	chr7	+	5900	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-7	527	intron_retention	FALSE	canonical	3	259	junction_5	49.6009072497671	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTGTTAATGTTA	NA	False	NA	NA	False	NA	NA	NA	127187931	127204498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.14	chr7	+	3790	17	ISM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	-5	6175	-5	-1979	5prime_fragment	FALSE	canonical	3	259	junction_5	41.2128620699898	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTAGTTTTTTGGATTT	NA	False	NA	NA	False	AATAAA	-16	NA	127187933	127197796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588
ES.32000.15	chr7	+	4103	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-5	9	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	88.6841012024939	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGGTCTAACCTGAG	NA	False	NA	30	True	AATAAA	-31	NA	127187933	127202775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.16	chr7	+	5027	16	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	0	intron_retention	FALSE	canonical	3	322	junction_4	44.0415964994711	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187935	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.17	chr7	+	4176	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	0	intron_retention	FALSE	canonical	3	39	junction_5	87.5190455462886	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187935	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.19	chr7	+	4770	18	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	0	intron_retention	FALSE	canonical	3	5	junction_7	97.188718783733	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187935	127202766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127190609_127190704_127190852_127190934_127191010_127191743_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.2	chr7	+	4182	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	259	junction_5	49.1277309736292	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTGCAGAGAAGCCCGT	NA	False	NA	11	True	AATAAA	-12	NA	127187903	127202756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.21	chr7	+	4156	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	2	intron_retention	FALSE	canonical	3	259	junction_4	50.1174238448018	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	127187935	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.23	chr7	+	4196	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	23	intron_retention	FALSE	canonical	3	259	junction_5	50.3214665923003	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTCTCTGCGCTACAC	NA	False	NA	44	True	AATAAA	-45	NA	127187935	127202789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.24	chr7	+	4087	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	95.4059703004747	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCCATTTGGTCTAAC	NA	False	NA	25	True	AATAAA	-26	NA	127187935	127202770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190928_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.25	chr7	+	5744	18	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_3	129.606751500846	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCCCGTCCATTTGG	NA	False	NA	19	True	AATAAA	-20	NA	127187936	127202764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188800_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191743_127191881_127191968_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.30	chr7	+	4252	18	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	27	junction_4	93.4672379364772	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCCCGTCCATTTGG	NA	False	NA	19	True	AATAAA	-20	NA	127187937	127202764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.32	chr7	+	4163	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	2	intron_retention	FALSE	canonical	3	259	junction_5	49.6009072497671	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	127187938	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.33	chr7	+	5119	15	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_5	106.525459254526	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187938	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127191010_127191743_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195855_127195975_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.34	chr7	+	4405	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	124.031918865697	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187938	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127194019_127194273_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.35	chr7	+	6041	16	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	1	-2	intron_retention	FALSE	canonical	3	259	junction_5	50.4859056239132	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCCCGTCCATTTGG	NA	False	NA	19	True	AATAAA	-20	NA	127187939	127202764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127193915_127195017_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.37	chr7	+	3887	16	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	4	-1975	intron_retention	FALSE	canonical	3	27	junction_5	90.8912903784882	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTTTTGGATTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	127187942	127197800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588
ES.32000.38	chr7	+	5802	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	4	-527	4	527	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATTTTGTTAATGTTA	NA	False	NA	NA	False	NA	NA	NA	127187942	127204498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.39	chr7	+	5957	17	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	6	2	intron_retention	FALSE	canonical	2	3	junction_2	102.813525830749	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	127187944	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188305_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.4	chr7	+	4179	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	259	junction_5	48.7637603245243	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCCCGTCCATTTGG	NA	False	NA	19	True	AATAAA	-20	NA	127187909	127202764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.40	chr7	+	4659	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	322	junction_4	42.3425186885344	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187945	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.41	chr7	+	4266	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	7	0	intron_retention	FALSE	canonical	3	39	junction_5	88.647328021955	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127187945	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.42	chr7	+	3970	21	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	94.2241343818026	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAAGCCCGTCCATTT	NA	False	NA	17	True	AATAAA	-18	NA	127187946	127202762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195446_127195537_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.43	chr7	+	4154	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	8	-2	intron_retention	FALSE	canonical	3	27	junction_5	89.9544637889391	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCCCGTCCATTTGG	NA	False	NA	19	True	AATAAA	-20	NA	127187946	127202764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.45	chr7	+	4175	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	9	-1	intron_retention	FALSE	canonical	3	39	junction_5	88.4482306559766	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTGCAGAGAAGCCCGT	NA	False	NA	11	True	AATAAA	-12	NA	127187947	127202756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.46	chr7	+	4114	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_13	97.5358275420934	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTGCAGAGAAGCCCGT	NA	False	NA	11	True	AATAAA	-12	NA	127187947	127202756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195636_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.47	chr7	+	3920	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.3826342676192	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAAGCCCGTCCATTT	NA	False	NA	17	True	AATAAA	-18	NA	127187949	127202762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192079_127193847_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.48	chr7	+	4126	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	117.670016091529	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	127187949	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190676_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.5	chr7	+	4146	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-26	13	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	86.3204427500525	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCTAACCTGAGTCTC	NA	False	NA	34	True	AATAAA	-35	NA	127187912	127202779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.50	chr7	+	4025	18	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	11	11	intron_retention	FALSE	canonical	0	0	junction_10	101.122215275108	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTCTAACCTGAGTC	NA	False	NA	32	True	AATAAA	-33	NA	127187949	127202777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.51	chr7	+	4442	19	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	12	298	intron_retention	FALSE	canonical	2	3	junction_2	97.1689536609073	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGTCTTATTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	127187950	127203064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188305_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.53	chr7	+	4252	16	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	835	0	combination_of_known_junctions	FALSE	canonical	3	322	junction_1	42.4192828269828	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127188925	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127189071_127189678_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.54	chr7	+	3843	15	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	835	-1	intron_retention	FALSE	canonical	3	27	junction_2	102.356320403435	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCCGTCCATTTGGT	NA	False	NA	20	True	AATAAA	-21	NA	127188925	127202765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.56	chr7	+	4161	13	ISM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	1771	5209	1619	-1013	internal_fragment	FALSE	canonical	3	259	junction_1	44.5479610457463	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGACATGGAGGATTA	NA	False	NA	NA	False	ATTAAA	-8	NA	127189709	127198762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588
ES.32000.57	chr7	+	3657	15	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	1630	9	intron_retention	FALSE	canonical	3	259	junction_1	51.8734724387826	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGGTCTAACCTGAG	NA	False	NA	30	True	AATAAA	-31	NA	127189720	127202775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.58	chr7	+	3713	13	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	1737	-1	intron_retention	FALSE	canonical	3	5	junction_4	117.762472800124	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTGCAGAGAAGCCCGT	NA	False	NA	11	True	AATAAA	-12	NA	127189827	127202756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191743_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199799_127201638
ES.32000.59	chr7	+	3592	12	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-1057	-1	intron_retention	FALSE	canonical	3	322	junction_5	41.3259568642252	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCCGTCCATTTGGT	NA	False	NA	20	True	AATAAA	-21	NA	127190529	127202765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196715_127199477_127199799_127201638
ES.32000.60	chr7	+	2574	7	NIC	ENSMUSG00000030816.9	novel	3906	18	NA	NA	-858	0	intron_retention	FALSE	canonical	3	350	junction_3	40.185680147148	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCAGAGAAGCCCGTC	NA	False	NA	12	True	AATAAA	-13	NA	127195124	127202757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.61	chr7	+	3068	2	NIC	ENSMUSG00000030816.9	novel	3735	17	NA	NA	1878	2	intron_retention	FALSE	canonical	3	459	junction_1	0	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	1671	False	NA	23	True	AATAAA	-24	NA	127197860	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127199799_127201638
ES.32000.62	chr7	+	2399	1	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	4387	2	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	4180	False	NA	23	True	AATAAA	-24	NA	127200369	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127200400_127202800
ES.32000.7	chr7	+	4364	18	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-17	11	intron_retention	FALSE	canonical	3	259	junction_5	50.6713407666158	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGTCTAACCTGAGTC	NA	False	NA	32	True	AATAAA	-33	NA	127187921	127202777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.8	chr7	+	4033	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-17	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	96.6678925002672	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGTCCATTTGGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	127187921	127202768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196360_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32000.9	chr7	+	4871	17	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	322	junction_4	43.3818438404824	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCCGTCCATTTGGT	NA	False	NA	20	True	AATAAA	-21	NA	127187924	127202765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ES.32001.1	chr7	-	5291	1	FSM	ENSMUSG00000099579.2	ENSMUST00000191038.2	546	1	522	-5267	522	5267	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCCAATGATTAAGTTCT	7232	False	NA	NA	False	NA	NA	NA	127203095	127197804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127197800_127203100
ES.32001.2	chr7	-	5211	2	Genic_Genomic	ENSMUSG00000099579.2	novel	546	1	NA	NA	524	5267	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCCAATGATTAAGTTCT	7234	False	NA	NA	False	NA	NA	NA	127203093	127197804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127199617_127199694
ES.32001.3	chr7	-	3442	2	Genic_Genomic	ENSMUSG00000099579.2	novel	546	1	NA	NA	522	5258	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAAAACTACCCAATGA	7232	False	NA	NA	False	NA	NA	NA	127203095	127197813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127199797_127201636
ES.32001.4	chr7	-	3362	3	Genic_Genomic	ENSMUSG00000099579.2	novel	546	1	NA	NA	524	5258	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAAAACTACCCAATGA	7234	False	NA	NA	False	NA	NA	NA	127203093	127197813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127199617_127199694_127199797_127201636
ES.32002.1	chr7	-	5678	4	NNC	ENSMUSG00000045639.15	novel	5829	3	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTTTACTTCTTATC	4441	False	NA	-1	True	AATAAA	-17	NA	127214405	127206203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127209685_127209795_127211735_127211838_127211946_127214254
ES.32002.2	chr7	-	5820	3	FSM	ENSMUSG00000045639.15	ENSMUST00000084564.10	5829	3	6	3	6	-3	multi-exon	FALSE	canonical	2	2	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTGTTTTTACTTCTTA	4408	False	NA	-3	True	AATAAA	-15	NA	127214438	127206205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127211735_127211838_127211946_127214254
ES.32003.1	chr7	+	207	1	Intergenic	novelGene_26220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGTGGTCTGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	127257690	127257897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127257700_127257900
ES.32004.1	chr7	+	476	2	Antisense	novelGene_ENSMUSG00000030814.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCGGAAGTGTTTCAA	NA	False	NA	NA	False	AATAAA	-27	NA	127266091	127267104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127266199_127266735
ES.32005.1	chr7	+	1203	4	NIC	ENSMUSG00000108801.2	novel	508	5	NA	NA	-193	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATCAAGAGAGAATCTCA	2700	False	NA	NA	False	NA	NA	NA	127290913	127299959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127291202_127296253_127296369_127298101_127298271_127299328
ES.32006.1	chr7	+	3038	1	Antisense	novelGene_ENSMUSG00000030814.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAATATATG	NA	False	NA	NA	False	NA	NA	NA	127308077	127311115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127308100_127311100
ES.32007.1	chr7	+	4138	14	Fusion	ENSMUSG00000030811.15_ENSMUSG00000042340.7	novel	3178	11	NA	NA	-32	0	multi-exon	FALSE	canonical	0	0	junction_2	43.7556420706833	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	NA	False	NA	15	True	TATAAA	-19	NA	127311875	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_127311952_127313099_127313220_127343813_127343957_127344307_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.10	chr7	+	4057	13	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-186	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.7501663336673	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCCGCTGACTTTTT	8798	False	NA	9	True	TATAAA	-13	NA	127343528	127368649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127343650_127343813_127343957_127344307_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.11	chr7	+	3414	13	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.7581495705396	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCCAGTTTGGCTCT	8866	False	NA	2	True	NA	NA	NA	127343596	127368098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127343664_127343813_127343957_127344307_127344505_127347459_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.12	chr7	+	3442	13	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	41.2380454057766	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	8878	False	NA	4	True	NA	NA	NA	127343608	127368100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127343664_127343813_127343957_127344307_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.13	chr7	+	2852	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-284	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.4978666059817	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTACTGAAGTGTTA	244	False	NA	4	True	NA	NA	NA	127344657	127367892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127344800_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.14	chr7	+	3136	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-232	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.5797628678972	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	296	False	NA	3	True	NA	NA	NA	127344709	127368099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127344800_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.15	chr7	+	3254	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	-231	7	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	36.3209306048179	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	297	False	NA	11	True	NA	NA	NA	127344710	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.16	chr7	+	3000	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-227	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	37.4978666059817	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCCAGTTTGGCTC	301	False	NA	1	True	NA	NA	NA	127344714	127368097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127344800_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.17	chr7	+	3698	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.2511653931107	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	528	False	NA	13	True	TATAAA	-17	NA	127344941	127368653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.18	chr7	+	3702	11	NNC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.3553489285148	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCCGCTGACTTTT	556	False	NA	8	True	TATAAA	-12	NA	127344969	127368648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127345077_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.19	chr7	+	3103	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.2511653931107	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCCAGTTTGGCTC	567	False	NA	1	True	NA	NA	NA	127344980	127368097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.2	chr7	+	4316	2	ISM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	-15	11	-15	-11	intron_retention	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAACATAGTTGTTCCA	NA	False	NA	NA	False	AATAAA	-44	NA	127311892	127317353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127311952_127313096
ES.32007.20	chr7	+	3972	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-558	-4	431	4	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGGCTCTTCCCAT	975	False	NA	8	True	NA	NA	NA	127345388	127368104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.21	chr7	+	4350	11	NIC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	475	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1019	False	NA	15	True	TATAAA	-19	NA	127345432	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.22	chr7	+	4472	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-507	-555	482	0	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1026	False	NA	15	True	TATAAA	-19	NA	127345439	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.23	chr7	+	2068	4	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	494	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.099487337973	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCCGCTGACTTTTTGT	1038	False	NA	11	True	TATAAA	-15	NA	127345451	127368651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127345502_127361702_127361774_127366616_127366836_127366923
ES.32007.24	chr7	+	3657	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-446	199	-446	2	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTGTTACTTGAACCG	1087	False	NA	13	True	NA	NA	NA	127345500	127367901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.25	chr7	+	3359	11	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-278	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGTGTTACTTGAACC	1255	False	NA	12	True	NA	NA	NA	127345668	127367900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.26	chr7	+	3265	10	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-274	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	35.1170880988616	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGTGTTACTTGAACC	1259	False	NA	12	True	NA	NA	NA	127345672	127367900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.27	chr7	+	3558	11	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-270	7	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	29.982661656364	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	1263	False	NA	11	True	NA	NA	NA	127345676	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.28	chr7	+	3747	10	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	-250	1	-250	0	intron_retention	FALSE	canonical	3	48	junction_1	22.1916456307879	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	1283	False	NA	3	True	NA	NA	NA	127345696	127368099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616
ES.32007.29	chr7	+	3410	10	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-222	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	35.1170880988616	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCCAGTTTGGCTC	1311	False	NA	1	True	NA	NA	NA	127345724	127368097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.3	chr7	+	1355	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	-10	7	-10	-7	multi-exon	FALSE	canonical	3	6	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTTGTTCCATGTG	NA	False	NA	NA	False	AATAAA	-30	NA	127311897	127317357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127311952_127313096_127313216_127316175
ES.32007.30	chr7	+	6378	12	Fusion	ENSMUSG00000030811.15_ENSMUSG00000043964.15	novel	3410	11	NA	NA	-199	-113	intron_retention	FALSE	canonical	3	48	junction_1	24.9561599080342	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTTGGGTATGGTTC	1334	False	NA	44	True	AATAAA	-44	NA	127345747	127374209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923_127369389_127372728
ES.32007.31	chr7	+	3704	10	NIC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	38.1559502988705	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	1446	False	NA	15	True	TATAAA	-19	NA	127345859	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.32	chr7	+	3790	10	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	35.1170880988616	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCCGCTGACTTTT	1482	False	NA	8	True	TATAAA	-12	NA	127345895	127368648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.33	chr7	+	3670	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	613	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	35.5652920696569	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2146	False	NA	15	True	TATAAA	-19	NA	127346559	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.34	chr7	+	3104	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	623	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	35.5652920696569	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	2156	False	NA	3	True	NA	NA	NA	127346569	127368099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.35	chr7	+	3562	10	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	624	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	40.0971043565215	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGGCCGCTGACTTTT	2157	False	NA	8	True	TATAAA	-12	NA	127346570	127368648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.36	chr7	+	2972	10	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	625	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.0866243670989	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCCAGTTTGGCTC	2158	False	NA	1	True	NA	NA	NA	127346571	127368097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347459_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.37	chr7	+	3778	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	626	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.3907394173088	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCGGGGCCGCTGACTTT	2159	False	NA	7	True	TATAAA	-11	NA	127346572	127368647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.38	chr7	+	3222	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	642	7	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.3907394173088	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	2175	False	NA	11	True	NA	NA	NA	127346588	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.39	chr7	+	4497	8	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-216	-2	intron_retention	FALSE	canonical	3	52	junction_3	26.0321622111525	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	2689	False	NA	13	True	TATAAA	-17	NA	127347102	127368653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127347623_127348881_127349026_127349152_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.4	chr7	+	1477	3	NNC	ENSMUSG00000042340.7	novel	1352	3	NA	NA	28	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTTGTTCCATGTG	NA	False	NA	NA	False	AATAAA	-30	NA	127311935	127317357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127312112_127313096_127313216_127316175
ES.32007.40	chr7	+	3626	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	-178	1	-51	-1	multi-exon	FALSE	canonical	3	25	junction_5	29.4282974593846	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGACTTTTTGTGTC	2854	False	NA	14	True	TATAAA	-18	NA	127347267	127368654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.41	chr7	+	2978	6	NIC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-35	-5515	intron_retention	FALSE	canonical	3	52	junction_3	24.9367199126108	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGGTTCCCTCAGGAGG	2870	False	NA	NA	False	NA	NA	NA	127347283	127362384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127347623_127348881_127349026_127349152_127350199_127351181_127351694_127360423_127360588_127361611
ES.32007.43	chr7	+	3738	10	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	1339	-555	-33	0	3prime_fragment	FALSE	canonical	3	52	junction_5	24.111367126137	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2872	False	NA	15	True	TATAAA	-19	NA	127347285	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.44	chr7	+	3518	9	NIC	ENSMUSG00000030811.15	novel	3410	11	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	35.611620294505	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGACTTTTTGTGTC	2872	False	NA	14	True	TATAAA	-18	NA	127347285	127368654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.45	chr7	+	2962	9	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	44.4036879099023	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	2874	False	NA	3	True	NA	NA	NA	127347287	127368099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127347623_127348881_127349026_127349152_127349240_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361775_127366616_127366836_127366923
ES.32007.46	chr7	+	1255	6	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	1628	16324	129	2887	internal_fragment	FALSE	canonical	3	52	junction_5	11.7132403714771	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCTGGCCGCCTTTCT	3161	False	NA	NA	False	NA	NA	NA	127347574	127351776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181
ES.32007.47	chr7	+	4050	10	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	130	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.638489836814	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	3162	False	NA	15	True	TATAAA	-19	NA	127347575	127368655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127365885_127366836_127366923
ES.32007.49	chr7	+	2320	6	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	2497	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.1978354471289	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTCCTCCAGTTTGGCT	5529	False	NA	0	True	NA	NA	NA	127349942	127368096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127350033_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.5	chr7	+	185	1	Antisense	novelGene_ENSMUSG00000060034.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTTTTTTCAAGAC	NA	False	NA	NA	False	NA	NA	NA	127317731	127317916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127317700_127317900
ES.32007.50	chr7	+	2368	6	ISM	ENSMUSG00000030811.15	ENSMUST00000188580.3	2601	9	2624	-208	2497	7	3prime_fragment	FALSE	canonical	3	25	junction_1	36.8814316424946	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	5529	False	NA	11	True	NA	NA	NA	127349942	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.51	chr7	+	3366	1	NIC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	11573	-5515	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAGGTTCCCTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	127359018	127362384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127359000_127362400
ES.32007.52	chr7	+	2112	3	ISM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	14165	2	14165	-2	3prime_fragment	FALSE	canonical	3	84	junction_1	22	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGCTGACTTTTTGTGT	NA	False	NA	13	True	TATAAA	-17	NA	127361610	127368653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127361774_127366616_127366836_127366923
ES.32007.53	chr7	+	4003	4	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	14190	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.3397786612521	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	NA	False	NA	11	True	NA	NA	NA	127361635	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127362180_127362390_127363647_127365816_127366836_127366923
ES.32007.54	chr7	+	1969	3	NNC	ENSMUSG00000043964.15	novel	2141	3	NA	NA	25	-144	intron_retention	FALSE	canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCCTATGGCTATGAA	NA	False	NA	13	True	AATAAA	-13	NA	127369011	127374178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127369389_127369908_127370051_127372728
ES.32007.56	chr7	+	1966	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	46	-16	46	16	multi-exon	FALSE	canonical	3	68	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGCCTCTGAACTCTT	NA	False	NA	NA	False	GATAAA	-31	NA	127369032	127374338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127369389_127372728
ES.32007.57	chr7	+	4409	1	NIC	ENSMUSG00000043964.15	novel	1996	2	NA	NA	729	-198	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACACTGAGTTTTTGA	NA	False	NA	-41	True	NA	NA	NA	127369715	127374124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127369700_127374100
ES.32007.6	chr7	+	3569	1	Antisense	novelGene_ENSMUSG00000060034.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	127323835	127327404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127323800_127327400
ES.32007.7	chr7	+	3538	13	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-2956	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.8817780584031	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGCTCTTCCCATTCT	6028	False	NA	11	True	NA	NA	NA	127340758	127368107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127340903_127343813_127343957_127344307_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.8	chr7	+	3947	12	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	-256	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	38.8799806142182	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCGCTGACTTTTTGTG	8728	False	NA	12	True	TATAAA	-16	NA	127343458	127368652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127343664_127343813_127343957_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32007.9	chr7	+	3548	13	NNC	ENSMUSG00000030811.15	novel	3178	11	NA	NA	-222	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.7501663336673	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGGCTCTTCCCAT	8762	False	NA	8	True	NA	NA	NA	127343492	127368104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127343650_127343813_127343957_127344307_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ES.32008.1	chr7	-	175	1	Intergenic	novelGene_26215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATGGTT	2825	False	NA	NA	False	NA	NA	NA	127230354	127230179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127230200_127230400
ES.32008.10	chr7	-	6273	5	FSM	ENSMUSG00000030814.18	ENSMUST00000206200.2	479	5	-299	-5495	24	-1	multi-exon	FALSE	canonical	2	5	junction_4	255.328587314464	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGTCTGTCTGCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	127307933	127260628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307607
ES.32008.11	chr7	-	5280	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-133	-4256	13	-1084	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATACGTTTTCTGAGAGT	NA	False	NA	NA	False	ATTAAA	-25	NA	127307944	127261711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.12	chr7	-	4632	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-215	-3526	-69	-1814	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGACAAGTGACTGCAA	NA	False	NA	56	True	AATACA	-32	NA	127308026	127262441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.13	chr7	-	4424	5	FSM	ENSMUSG00000030814.18	ENSMUST00000206200.2	479	5	-323	-3622	0	-1874	multi-exon	FALSE	canonical	2	5	junction_4	255.328587314464	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCCACTGTTTGTCTTT	NA	False	NA	-4	True	GATAAA	-20	NA	127307957	127262501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307607
ES.32008.14	chr7	-	2582	7	NNC	ENSMUSG00000030814.18	novel	891	6	NA	NA	1	-1881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.595082110999	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTGTATCCACTGTT	NA	False	NA	-11	True	GATAAA	-13	NA	127307956	127262508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127263131_127265043_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.15	chr7	-	227	1	Intergenic	novelGene_26221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGCAGGTTGGTATTG	4345	False	NA	NA	False	AAGAAA	-29	NA	127269740	127269513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127269500_127269700
ES.32008.16	chr7	-	1042	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	95	-5	-53	5	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTCATTTCCCTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	127308010	127304144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.17	chr7	-	911	5	NIC	ENSMUSG00000030814.18	novel	1132	6	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	227.351050140526	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCATGTCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	127307965	127304151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307607
ES.32008.2	chr7	-	175	2	Intergenic	novelGene_26216	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGAATGGT	5370	False	NA	NA	False	NA	NA	NA	127255321	127230180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127230275_127255240
ES.32008.20	chr7	-	926	6	NIC	ENSMUSG00000030814.18	novel	1132	6	NA	NA	23	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	198.784707661329	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCATGTCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	127307934	127304151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127304348_127304898_127304985_127306347_127306477_127306604_127306714_127307051_127307131_127307607
ES.32008.21	chr7	-	651	4	NNC	ENSMUSG00000030814.18	novel	1132	6	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	242.653845815163	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCATGTCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	127307945	127304151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127304348_127304898_127304964_127307078_127307131_127307607
ES.32008.23	chr7	-	1444	5	NIC	ENSMUSG00000030814.18	novel	1132	6	NA	NA	23	-3	intron_retention	FALSE	canonical	3	496	junction_2	25.1433390781734	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGTGTCATGTCATT	NA	False	NA	NA	False	AATAAA	-11	NA	127308082	127304152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127307131_127307607
ES.32008.24	chr7	-	990	5	ISM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	168	525	20	291	5prime_fragment	FALSE	canonical	3	471	junction_3	31.5792653492763	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGCAGCTTGGTGGAAC	NA	False	NA	NA	False	NA	NA	NA	127307937	127304674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.25	chr7	-	336	1	Intergenic	novelGene_26222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGGTGATGGTGCACA	NA	False	NA	NA	False	NA	NA	NA	127319644	127319308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127319300_127319600
ES.32008.26	chr7	-	178	1	Intergenic	novelGene_26223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAGAAAAGA	6561	False	NA	NA	False	NA	NA	NA	127339034	127338856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127338900_127339000
ES.32008.3	chr7	-	172	2	Antisense	novelGene_ENSMUSG00000076454.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	6563	False	NA	NA	False	NA	NA	NA	127339032	127237116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127237132_127338875
ES.32008.4	chr7	-	295	1	Intergenic	novelGene_26217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	127237411	127237116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127237100_127237400
ES.32008.5	chr7	-	3736	1	Intergenic	novelGene_26218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAGGGTAGGAAGTC	8258	False	NA	NA	False	NA	NA	NA	127252433	127248697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127248700_127252400
ES.32008.6	chr7	-	154	1	Intergenic	novelGene_26219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	5370	False	NA	NA	False	NA	NA	NA	127255321	127255167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127255200_127255300
ES.32008.7	chr7	-	6486	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-18	-5577	-18	237	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCAATACAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	127307829	127260390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.8	chr7	-	6567	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-334	-5342	-40	2	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTCTGCTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	127308145	127260625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32008.9	chr7	-	5940	7	NNC	ENSMUSG00000030814.18	novel	891	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.595082110999	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTCTGTCTGCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	127307847	127260627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127265698_127266024_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ES.32009.1	chr7	-	1818	1	Antisense	novelGene_ENSMUSG00000030811.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCTTTGTTTAGTGT	654	False	NA	NA	False	AATAAA	-18	NA	127344941	127343123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127343100_127344900
ES.3201.1	chr10	-	107	1	Intergenic	novelGene_2514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACATATACACATACAGT	NA	False	NA	NA	False	NA	NA	NA	77625428	77625321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77625300_77625400
ES.32010.1	chr7	+	6026	19	FSM	ENSMUSG00000042308.15	ENSMUST00000047075.14	6487	19	461	0	-18	0	multi-exon	TRUE	canonical	0	0	junction_1	14.5429334585649	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376302	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127376520_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.10	chr7	+	6038	19	Fusion	ENSMUSG00000108815.2_ENSMUSG00000042308.15	novel	5188	19	NA	NA	-141	0	multi-exon	FALSE	non_canonical	0	0	junction_14	16.3235987620135	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376725	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_127376957_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395866_127396242_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.11	chr7	+	5555	16	NNC	ENSMUSG00000042308.15	novel	6487	19	NA	NA	1934	0	intron_retention	FALSE	non_canonical	0	0	junction_5	15.4531550176655	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127379682	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385587_127385649_127385845_127386297_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.12	chr7	+	4009	12	NIC	ENSMUSG00000108815.2	novel	5188	19	NA	NA	13	-1905	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	16.1091319515176	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127384792	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398477
ES.32010.13	chr7	+	4121	11	NIC	ENSMUSG00000108815.2	novel	5188	19	NA	NA	558	-1905	intron_retention	FALSE	canonical	3	26	junction_5	12.4100765509323	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127385337	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.16	chr7	+	3092	11	NNC	ENSMUSG00000042308.15	novel	6487	19	NA	NA	8692	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.5287628091155	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127386440	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398486
ES.32010.17	chr7	+	1700	5	ISM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	19041	-2	17853	2	intron_retention	FALSE	canonical	3	45	junction_1	5.1720402163943	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127395601	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262
ES.32010.18	chr7	+	1843	4	NIC	ENSMUSG00000042308.15	novel	6487	19	NA	NA	18174	2	intron_retention	FALSE	canonical	3	51	junction_2	3.2659863237109	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127395922	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127396419_127396498_127396896_127398262_127398401_127398477
ES.32010.2	chr7	+	6322	18	NIC	ENSMUSG00000042308.15	novel	5927	19	NA	NA	-9	2	intron_retention	FALSE	canonical	3	24	junction_1	10.719771210697	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127376311	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.3	chr7	+	6177	19	NNC	ENSMUSG00000042308.15	novel	6487	19	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	14.691477331189	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376313	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395863_127396241_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.4	chr7	+	5987	19	FSM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	-53	-7	-53	0	multi-exon	FALSE	canonical	3	14	junction_7	11.9666460332021	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376507	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.6	chr7	+	6143	18	NIC	ENSMUSG00000042308.15	novel	5927	19	NA	NA	-18	2	intron_retention	FALSE	canonical	3	14	junction_7	12.2429274830982	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGGTCAGTATC	NA	False	NA	12	True	ATTAAA	-12	NA	127376542	127399289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.7	chr7	+	5861	20	NNC	ENSMUSG00000042308.15	novel	5927	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.4471527162499	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376556	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385154_127385230_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32010.9	chr7	+	5249	19	NNC	ENSMUSG00000042308.15	novel	5927	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	17.929560390664	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTCAGTATCTTTGG	NA	False	NA	17	True	ATTAAA	-17	NA	127376564	127399294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384458_127385282_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387746_127390391_127390705_127394814_127395872_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ES.32011.1	chr7	-	2227	1	Antisense	novelGene_ENSMUSG00000042308.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGTCTATCACGACTAG	NA	False	NA	NA	False	AATAAA	-16	NA	127376947	127374720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127374700_127376900
ES.32011.2	chr7	-	2451	3	Antisense	novelGene_ENSMUSG00000042308.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTCAGTGGTTAAAATC	7476	False	NA	NA	False	NA	NA	NA	127379695	127375233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127377450_127377677_127377772_127379554
ES.32012.1	chr7	+	2317	5	FSM	ENSMUSG00000042289.12	ENSMUST00000144748.8	2286	5	-31	0	-31	0	multi-exon	FALSE	canonical	3	82	junction_2	5.22015325445528	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1853	False	NA	14	True	AATAAA	-15	NA	127399744	127402974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401286_127401407
ES.32012.10	chr7	+	1799	6	ISM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	282	4	-20	-4	3prime_fragment	FALSE	canonical	0	0	junction_4	34.0552492282761	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	2176	False	NA	10	True	AATAAA	-11	NA	127400067	127402970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401500_127401571_127401957
ES.32012.11	chr7	+	2094	4	NNC	ENSMUSG00000042289.12	novel	2286	5	NA	NA	221	-3	intron_retention	FALSE	canonical	0	0	junction_1	44.5645599103144	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTGTCTACCTTTTAC	2442	False	NA	11	True	AATAAA	-12	NA	127400333	127402971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127400428_127400632_127400789_127401005_127401286_127401407
ES.32012.2	chr7	+	1847	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	-23	4	-23	-4	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	1861	False	NA	10	True	AATAAA	-11	NA	127399752	127402970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ES.32012.3	chr7	+	1748	7	FSM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	-27	4	-17	-4	multi-exon	FALSE	canonical	0	0	junction_5	32.540999779765	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	1867	False	NA	10	True	AATAAA	-11	NA	127399758	127402970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401500_127401571_127401957
ES.32012.4	chr7	+	2824	2	ISM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	1	4	1	-4	intron_retention	FALSE	canonical	3	91	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	1895	False	NA	10	True	AATAAA	-11	NA	127399786	127402970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127399887_127400246
ES.32012.5	chr7	+	1754	7	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	5	-7	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.5389597256491	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGTCCTTGTCTACCTT	1899	False	NA	7	True	AATAAA	-8	NA	127399790	127402967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ES.32012.6	chr7	+	1690	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	18	120	8	-120	multi-exon	FALSE	canonical	3	65	junction_6	10.2794292967395	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATGATTTCCCATGT	1902	False	NA	NA	False	AAGAAA	-8	NA	127399793	127402854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ES.32012.7	chr7	+	2046	5	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_3	38.6167062292993	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	1940	False	NA	10	True	AATAAA	-11	NA	127399831	127402970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127399887_127400246_127400419_127400632_127400789_127401185_127401286_127401407
ES.32012.8	chr7	+	1508	5	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	37.5990358918949	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTACCTTTTACCCAA	1940	False	NA	15	True	AATAAA	-16	NA	127399831	127402975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127399887_127400246_127400419_127401185_127401286_127401407_127401571_127401957
ES.32012.9	chr7	+	2129	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	78	8	2	-8	intron_retention	FALSE	canonical	3	82	junction_2	5.54977477020464	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTCCTTGTCTACCT	1962	False	NA	6	True	AATAAA	-7	NA	127399853	127402966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407
ES.32013.1	chr7	-	4472	10	NNC	ENSMUSG00000030806.7	novel	4536	10	NA	NA	-5624	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.39664500999739	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTGCTCACTTCCT	6310	False	NA	0	True	NA	NA	NA	127415720	127403071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127406562_127406827_127406939_127407018_127407157_127409826_127409901_127410071_127410181_127410334_127410409_127414084_127414160_127414235_127414336_127414517_127414593_127415494
ES.32014.1	chr7	+	355	1	Intergenic	novelGene_26224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127419306	127419661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127419300_127419700
ES.32015.1	chr7	+	1806	9	ISM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	-262	65	-262	-46	intron_retention	FALSE	canonical	3	172	junction_3	23.6207006669997	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440673	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559
ES.32015.10	chr7	+	1280	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	12	-46	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	69.4294205970671	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440947	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447922
ES.32015.11	chr7	+	1455	10	NNC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	13	-46	intron_retention	FALSE	canonical	1	1	junction_2	70.6289207367948	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440948	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441622_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ES.32015.12	chr7	+	1431	11	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	20	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.2732487694775	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440955	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441777_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.13	chr7	+	1546	9	NIC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	20	-46	intron_retention	FALSE	canonical	1	3	junction_2	74.255892022115	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440955	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441594_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559
ES.32015.14	chr7	+	1547	9	NIC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	20	-46	intron_retention	FALSE	canonical	1	3	junction_2	71.7652422834341	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440955	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441594_127441717_127441855_127441931_127442743_127442815_127445191_127445449_127445659_127445798_127447559_127447671_127447740
ES.32015.15	chr7	+	1537	9	NNC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	22	-46	intron_retention	FALSE	canonical	0	0	junction_5	74.0969592830907	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440957	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445176_127445301_127445371_127445449_127445659_127445798_127447559
ES.32015.16	chr7	+	1267	11	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	22	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.3112547728184	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440957	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445761_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.17	chr7	+	1397	11	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.3112547728184	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAATAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	127440957	127448163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445668_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.18	chr7	+	1411	11	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	42	-46	intron_retention	FALSE	non_canonical	0	0	junction_1	65.3112547728184	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440977	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441002_127441150_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.19	chr7	+	1443	10	NNC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	46	-46	intron_retention	FALSE	canonical	0	0	junction_5	69.9281818531266	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440981	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445176_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ES.32015.2	chr7	+	2075	7	NIC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	-241	-46	intron_retention	FALSE	canonical	3	172	junction_2	23.6924741918891	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440694	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445798_127447559
ES.32015.20	chr7	+	3072	9	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	65	0	intron_retention	TRUE	non_canonical	0	0	junction_6	86.6862157439117	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAGAAGAAGCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	127441000	127448172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127446714_127446806_127447232_127447552_127447840_127447922
ES.32015.21	chr7	+	1201	11	NNC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	-20	-46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	67.2137634714796	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127441119	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127441241_127441435_127441538_127441622_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.22	chr7	+	1025	7	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	-72	-46	intron_retention	FALSE	canonical	3	173	junction_6	23.1420732769464	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127441784	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
ES.32015.23	chr7	+	1014	7	ISM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	669	46	-48	-46	3prime_fragment	FALSE	canonical	3	196	junction_6	15.4425458465313	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127441808	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ES.32015.24	chr7	+	2609	2	NIC	ENSMUSG00000030805.15	novel	742	3	NA	NA	986	-46	intron_retention	FALSE	canonical	3	228	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127443755	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127445798_127447559
ES.32015.3	chr7	+	1710	10	FSM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	-440	46	-236	-46	multi-exon	FALSE	canonical	3	172	junction_3	22.9965107390847	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440699	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ES.32015.4	chr7	+	1523	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	-95	28	-95	-9	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAATAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	127440840	127448163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.5	chr7	+	1505	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	-39	-41	intron_retention	FALSE	canonical	3	172	junction_3	25.7681974534502	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440896	127448131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
ES.32015.6	chr7	+	1771	8	NIC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	-6	-37	intron_retention	FALSE	canonical	3	172	junction_3	19.1044390610333	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440929	127448135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445798_127447559_127447671_127447740
ES.32015.7	chr7	+	1414	11	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	-1	-46	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	66.6550073137795	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440934	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441538_127441594_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.8	chr7	+	1281	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	8	-46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.1354125143043	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440943	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ES.32015.9	chr7	+	3585	6	NIC	ENSMUSG00000030805.15	novel	1316	10	NA	NA	12	-46	intron_retention	FALSE	canonical	3	172	junction_2	19.2187408536564	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127440947	127448126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127441241_127441435_127441717_127441855_127441931_127442743_127442815_127445191_127447671_127447740
ES.32016.1	chr7	+	6665	1	Antisense	novelGene_ENSMUSG00000049728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAGGTCGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	127463753	127470418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127463800_127470400
ES.32017.1	chr7	+	2532	1	Antisense	novelGene_ENSMUSG00000049728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	127471610	127474142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127471600_127474100
ES.32018.1	chr7	+	8286	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	-1975	-1	-495	1	multi-exon	FALSE	canonical	3	99	junction_1	27	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTGTGGTTATATCT	3181	False	NA	21	True	AAAACA	-20	NA	127474897	127485169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127477280_127477741_127483091_127484614
ES.32018.10	chr7	+	6115	3	NNC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	874	False	NA	20	True	AAAACA	-19	NA	127476083	127485168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127476296_127477741_127483091_127484614
ES.32018.12	chr7	+	5110	1	FSM	ENSMUSG00000049739.11	ENSMUST00000206340.2	6682	1	1575	-3	1575	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGTGTGGTTATAT	199	False	NA	19	True	AAAACA	-18	NA	127480057	127485167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127480100_127485200
ES.32018.2	chr7	+	8526	2	NIC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	-278	0	intron_retention	FALSE	canonical	3	153	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTACTGGTGTGGTTA	3398	False	NA	16	True	AAAACA	-15	NA	127475114	127485164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127483091_127484614
ES.32018.3	chr7	+	6960	3	NIC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	73	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	118	False	NA	20	True	AAAACA	-19	NA	127475327	127485168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127476385_127477741_127483091_127484614
ES.32018.4	chr7	+	7144	4	NIC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	56.7802782663136	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	139	False	NA	20	True	AAAACA	-19	NA	127475348	127485168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127476385_127477074_127477280_127477741_127483091_127484614
ES.32018.5	chr7	+	6076	3	NNC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTGGTGTGGTTATA	143	False	NA	18	True	AAAACA	-17	NA	127475352	127485166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127475528_127477741_127483091_127484614
ES.32018.6	chr7	+	6381	4	NNC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	55.0474542755814	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	845	False	NA	20	True	AAAACA	-19	NA	127476054	127485168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127476385_127477131_127477280_127477741_127483091_127484614
ES.32018.7	chr7	+	6333	4	NNC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	61.1519055758327	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	852	False	NA	20	True	AAAACA	-19	NA	127476061	127485168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127476385_127477172_127477280_127477741_127483091_127484614
ES.32018.8	chr7	+	6321	4	NNC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	108	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	61.5918465022405	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACAGCTACTGGTGTGG	866	False	NA	13	True	AAAACA	-12	NA	127476075	127485161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127476296_127477074_127477280_127477741_127483091_127484614
ES.32018.9	chr7	+	6261	4	NNC	ENSMUSG00000049739.11	novel	6310	3	NA	NA	115	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	60.2734509455771	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTACTGGTGTGGTTAT	873	False	NA	17	True	AAAACA	-16	NA	127476082	127485165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127476296_127477131_127477280_127477741_127483091_127484614
ES.32019.1	chr7	+	2276	1	Antisense	novelGene_ENSMUSG00000030804.9_AS_novelGene_ENSMUSG00000096145.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCTTGATTTCGCTTT	1445	False	NA	NA	False	AATAAA	-19	NA	127491868	127494144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127491900_127494100
ES.3202.1	chr10	-	154	1	Intergenic	novelGene_2515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77659241	77659087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77659100_77659200
ES.32020.1	chr7	+	1903	11	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	-23	1612	-23	1	intron_retention	FALSE	canonical	3	550	junction_9	35.5409622829771	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGCCCCAAATGTTGG	NA	False	NA	29	True	ATTAAA	-21	NA	127503230	127507781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ES.32020.10	chr7	+	1418	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	177.706190100401	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGGGCCCCAAATGTT	NA	False	NA	27	True	ATTAAA	-19	NA	127503263	127507779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.11	chr7	+	3400	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	10	-5	10	5	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCCTTCTCTCTTATT	NA	False	NA	NA	False	NA	NA	NA	127503263	127509398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.13	chr7	+	1852	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	10	2	intron_retention	FALSE	canonical	3	550	junction_8	39.8121840646805	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTCTTGGGCCCCAA	NA	False	NA	22	True	ATTAAA	-14	NA	127503263	127507774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.14	chr7	+	1762	12	NNC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	176.197625709841	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGCCCCAAATGTTGG	NA	False	NA	29	True	ATTAAA	-21	NA	127503263	127507781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504562_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.15	chr7	+	3714	10	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	10	-564	intron_retention	FALSE	canonical	3	550	junction_8	36.6424162230968	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127503263	127508829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127506520_127506613_127506704_127507092
ES.32020.16	chr7	+	1895	12	NNC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	175.787108281627	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTTGGGCCCCAAATGT	NA	False	NA	26	True	ATTAAA	-18	NA	127503266	127507778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506272_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.17	chr7	+	3920	9	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-8	-533	intron_retention	FALSE	canonical	3	550	junction_7	38.4740172064213	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAAGTACAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	127503266	127508860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127506520_127506613_127506704_127507092
ES.32020.18	chr7	+	5001	8	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-7	473	intron_retention	FALSE	canonical	3	550	junction_6	40.5865163092677	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127503267	127509866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127505165_127505243_127506520_127506613_127506704_127507092
ES.32020.19	chr7	+	1676	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	185.866860951596	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGGGCCCCAAATGTT	NA	False	NA	27	True	ATTAAA	-19	NA	127503269	127507779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.2	chr7	+	1825	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	-13	1593	-13	20	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGCAGGCGAGCTTTGT	NA	False	NA	48	True	ATTAAA	-40	NA	127503240	127507800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.20	chr7	+	3981	11	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	19	-508	-2	508	intron_retention	FALSE	canonical	3	550	junction_9	35.5409622829771	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAAAACTGATCACC	NA	False	NA	NA	False	NA	NA	NA	127503272	127509901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ES.32020.21	chr7	+	3004	8	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	1	15	intron_retention	FALSE	canonical	3	550	junction_5	44.490310800241	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGAGGGCAGGCGAGC	NA	False	NA	43	True	ATTAAA	-35	NA	127503275	127507795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127505165_127505243_127505343_127505520_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.22	chr7	+	5139	5	NIC	ENSMUSG00000030802.15	novel	1792	10	NA	NA	46	508	intron_retention	FALSE	canonical	3	567	junction_1	36.2491379207837	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAAAACTGATCACC	NA	False	NA	NA	False	NA	NA	NA	127503320	127509901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127505165_127505243_127505343_127505520_127505595_127506390_127506704_127507092
ES.32020.23	chr7	+	2333	9	NIC	ENSMUSG00000030802.15	novel	1792	10	NA	NA	206	12	intron_retention	FALSE	canonical	3	550	junction_7	38.8297566307078	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGGGAGGGCAGGCG	NA	False	NA	40	True	ATTAAA	-32	NA	127503480	127507792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ES.32020.3	chr7	+	1762	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	-6	12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	184.408893494864	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGGGAGGGCAGGCG	NA	False	NA	40	True	ATTAAA	-32	NA	127503247	127507792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.5	chr7	+	2872	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	0	533	0	-533	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAAGTACAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	127503253	127508860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.6	chr7	+	4090	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	1	508	intron_retention	FALSE	canonical	3	550	junction_8	39.6918127577968	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAAAACTGATCACC	NA	False	NA	NA	False	NA	NA	NA	127503254	127509901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ES.32020.7	chr7	+	4098	7	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	5	-533	intron_retention	FALSE	canonical	3	567	junction_5	38.5962001583921	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAAGTACAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	127503258	127508860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127505165_127505243_127506704_127507092
ES.32020.8	chr7	+	3107	10	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	6	-557	intron_retention	FALSE	canonical	3	550	junction_8	37.2174126245919	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127503259	127508836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505595_127506390_127506520_127506613_127506704_127507092
ES.32020.9	chr7	+	5569	1	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	7	-564	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127503260	127508829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127503300_127508800
ES.32021.1	chr7	+	1576	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	-3	6	-3	-6	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACATTGATTCCTCGC	NA	False	NA	86	True	NA	NA	NA	127511684	127525003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.10	chr7	+	1000	3	FSM	ENSMUSG00000030801.11	ENSMUST00000206071.2	1014	3	8	6	8	-6	multi-exon	FALSE	canonical	3	295	junction_2	0.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAGAAACAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	127511695	127515256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127511915_127514399_127514475_127514550
ES.32021.11	chr7	+	3209	11	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	8	-75	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	94.7285067970566	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAGGTACGCAGAGA	NA	False	NA	17	True	AGTAAA	-18	NA	127511695	127524934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127511915_127514399_127514475_127514550_127516075_127519042_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.12	chr7	+	1535	11	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	9	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.8655829795031	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGATGCCAAAGGGTGG	NA	False	NA	30	True	AGTAAA	-31	NA	127511696	127524947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127511915_127514399_127514475_127514523_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.13	chr7	+	1322	11	NNC	ENSMUSG00000030801.11	novel	660	2	NA	NA	288	-75	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	93.4796234481077	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAGGTACGCAGAGA	NA	False	NA	17	True	AGTAAA	-18	NA	127511975	127524934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127512021_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.14	chr7	+	4168	8	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	4579	74	-2693	-74	3prime_fragment	FALSE	canonical	3	296	junction_7	13.1413042560859	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGAGGTACGCAGAGAT	3817	False	NA	18	True	AGTAAA	-19	NA	127516266	127524935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.15	chr7	+	6118	4	NIC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	-1939	-5	intron_retention	FALSE	canonical	3	316	junction_3	5.73488351136175	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTGATTCCTCGCT	4571	False	NA	87	True	NA	NA	NA	127517020	127525004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127519462_127519593_127519759_127521330_127524119_127524280
ES.32021.16	chr7	+	1209	6	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	9241	75	1969	-75	3prime_fragment	FALSE	canonical	3	296	junction_5	13.5558105622644	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAGGTACGCAGAGA	841	False	NA	17	True	AGTAAA	-18	NA	127520928	127524934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.2	chr7	+	1443	12	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	1	-80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4521958852351	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTTTGGAGGTACGC	NA	False	NA	12	True	AGTAAA	-13	NA	127511688	127524929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127511763_127511817_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.4	chr7	+	1599	10	NIC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	1	-64	intron_retention	FALSE	canonical	3	295	junction_2	15.2250605626317	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAGAGATGCCAAAGGGT	NA	False	NA	28	True	AGTAAA	-29	NA	127511688	127524945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.5	chr7	+	1455	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	2	122	2	-122	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCATTTATTC	NA	False	NA	-30	True	NA	NA	NA	127511689	127524887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.6	chr7	+	1450	12	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	7	-58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4521958852351	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCAAAGGGTGGTATT	NA	False	NA	34	True	AGTAAA	-35	NA	127511694	127524951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127511755_127511818_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32021.7	chr7	+	3108	3	FSM	ENSMUSG00000030801.11	ENSMUST00000206071.2	1014	3	7	-2101	7	2101	multi-exon	FALSE	canonical	3	295	junction_2	0.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATAGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	127511694	127517363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127511915_127514399_127514475_127514550
ES.32021.9	chr7	+	1534	11	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.8542643808819	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTGATTCCTCGCT	NA	False	NA	87	True	NA	NA	NA	127511695	127525004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127511883_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ES.32022.1	chr7	-	209	1	Intergenic	novelGene_26225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	127428111	127427902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127427900_127428100
ES.32022.10	chr7	-	3161	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	7	2600	7	70	multi-exon	FALSE	canonical	3	42	junction_2	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGCTTTGTTTAGC	NA	False	NA	NA	False	ACTAAA	-37	NA	127475993	127464818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127475218
ES.32022.11	chr7	-	2709	4	NIC	ENSMUSG00000049728.15	novel	3132	4	NA	NA	-5	70	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.8958996814325	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGCTTTGTTTAGC	NA	False	NA	NA	False	ACTAAA	-37	NA	127474823	127464818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127466536_127466927_127467597_127473848_127473931_127474582
ES.32022.12	chr7	-	3212	4	FSM	ENSMUSG00000049728.15	ENSMUST00000106263.8	3132	4	-10	-70	-10	70	multi-exon	FALSE	canonical	0	0	junction_3	22.8958996814325	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGCTTTGTTTAGC	NA	False	NA	NA	False	ACTAAA	-37	NA	127475962	127464818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127473848_127473931_127475218
ES.32022.13	chr7	-	10838	1	Genic_Genomic	ENSMUSG00000049728.15	novel	NA	NA	NA	NA	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	False	NA	2	True	ATTAAA	-20	NA	127476002	127465164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127465200_127476000
ES.32022.14	chr7	-	2830	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	-8	2946	-8	0	multi-exon	FALSE	canonical	3	42	junction_2	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	False	NA	2	True	ATTAAA	-20	NA	127476008	127465164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127475218
ES.32022.15	chr7	-	2071	3	FSM	ENSMUSG00000049728.15	ENSMUST00000106262.2	3169	3	1096	2	-24	-2	multi-exon	TRUE	canonical	0	0	junction_2	25	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTCTGTATTGTG	NA	False	NA	0	True	ATTAAA	-18	NA	127474853	127465166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127474820
ES.32022.16	chr7	-	2203	4	FSM	ENSMUSG00000049728.15	ENSMUST00000106263.8	3132	4	651	278	5	-2	multi-exon	FALSE	canonical	0	0	junction_3	22.8958996814325	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTCTGTATTGTG	NA	False	NA	0	True	ATTAAA	-18	NA	127475301	127465166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127473848_127473931_127475218
ES.32022.17	chr7	-	2276	3	NIC	ENSMUSG00000049728.15	novel	3169	3	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	23	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTCTTCTGTATTGTG	NA	False	NA	0	True	ATTAAA	-18	NA	127474820	127465166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127466536_127466927_127467597_127474582
ES.32022.18	chr7	-	1929	4	NNC	ENSMUSG00000049728.15	novel	3132	4	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.9291789378647	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTGTCTTCTGTATTGT	NA	False	NA	-1	True	ATTAAA	-17	NA	127475359	127465167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127466536_127466927_127467107_127467355_127467597_127475218
ES.32022.19	chr7	-	3320	10	NNC	ENSMUSG00000044139.13	novel	2134	11	NA	NA	-1185	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	0.955813918560292	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTCTCTCTGATCTGC	NA	False	NA	NA	False	AGTAAA	-32	NA	127491327	127485012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127485454_127485699_127485917_127486121_127486268_127486348_127486591_127486670_127486822_127487466_127487687_127487817_127487973_127488105_127488372_127488650_127488814_127490008
ES.32022.2	chr7	-	178	2	Antisense	novelGene_ENSMUSG00000108479.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	127513599	127427931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127428060_127513549
ES.32022.20	chr7	-	3389	11	NNC	ENSMUSG00000044139.13	novel	2134	11	NA	NA	-1285	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.9	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTCGCACCAGTGGTT	NA	False	NA	NA	False	AGTAAA	-19	NA	127491427	127485025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127485454_127485699_127485917_127486121_127486251_127486348_127486591_127486670_127486822_127487466_127487687_127487817_127487973_127488105_127488372_127488650_127488814_127488908_127488930_127490030
ES.32022.21	chr7	-	2497	14	NNC	ENSMUSG00000030804.9	novel	2037	13	NA	NA	-136	237	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	100.977061077778	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	127494762	127485161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127485454_127485699_127485917_127486121_127486268_127486348_127486591_127486670_127486822_127487466_127487687_127487817_127487973_127488105_127488372_127488650_127488814_127488908_127488930_127490030_127490190_127492490_127492664_127493676_127493787_127494580
ES.32022.22	chr7	-	3275	9	ISM	ENSMUSG00000044139.13	ENSMUST00000121394.3	2134	11	-96	151	-96	101	intron_retention	FALSE	canonical	0	0	junction_6	0.85695682505013	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAAAGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	127490238	127485163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127485454_127485699_127485917_127486121_127486268_127486348_127486591_127486670_127486822_127487466_127487687_127487817_127487973_127488105_127488372_127488650
ES.32022.23	chr7	-	811	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	-65	2	-65	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAGCATATGTCTG	NA	False	NA	-13	True	AATAAA	-17	NA	127494854	127492236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127492664_127493676_127493787_127494580
ES.32022.24	chr7	-	1212	1	Antisense	novelGene_ENSMUSG00000030801.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAAACC	933	False	NA	NA	False	NA	NA	NA	127511919	127510707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127510700_127511900
ES.32022.25	chr7	-	579	1	Antisense	novelGene_ENSMUSG00000030801.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAACTTTTTAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	127513600	127513021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127513000_127513600
ES.32022.26	chr7	-	160	1	Antisense	novelGene_ENSMUSG00000030801.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	127513602	127513442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_127513400_127513600
ES.32022.3	chr7	-	175	1	Intergenic	novelGene_26226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTGGAGAAGCTAA	NA	False	NA	NA	False	NA	NA	NA	127429548	127429373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127429400_127429500
ES.32022.4	chr7	-	179	1	Intergenic	novelGene_26227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	127437366	127437187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127437200_127437400
ES.32022.5	chr7	-	2272	1	Intergenic	novelGene_26228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTGTAAGGGTATGCT	8391	False	NA	NA	False	AAAAAG	-17	NA	127440746	127438474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127438500_127440700
ES.32022.6	chr7	-	185	1	Intergenic	novelGene_26229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATAAAAGGCTGGAAATT	9939	False	NA	NA	False	NA	NA	NA	127439198	127439013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127439000_127439200
ES.32022.7	chr7	-	338	1	Intergenic	novelGene_26230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	127451696	127451358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127451400_127451700
ES.32022.8	chr7	-	187	1	Intergenic	novelGene_26231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTTTAGCT	NA	False	NA	NA	False	NA	NA	NA	127451704	127451517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127451500_127451700
ES.32022.9	chr7	-	3247	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	218	2303	167	367	multi-exon	FALSE	canonical	3	42	junction_2	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAACCTTACTAGAAAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	127475782	127464521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127466536_127466927_127467597_127475218
ES.32023.1	chr7	-	1118	2	ISM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	3160	7	3151	-7	3prime_fragment	FALSE	canonical	3	32	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGGTCTGTACACATA	NA	False	NA	NA	False	AATAAA	-7	NA	127526116	127524894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127525813_127525916
ES.32023.2	chr7	-	1655	5	NNC	ENSMUSG00000030800.11	novel	1852	6	NA	NA	84	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.1244047484067	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCTGTCTGTGAGATG	NA	False	NA	-2	True	AATAAA	-29	NA	127529183	127524999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528943
ES.32023.3	chr7	-	1773	5	NNC	ENSMUSG00000030800.11	novel	1852	6	NA	NA	-43	-117	intron_retention	FALSE	non_canonical	0	0	junction_4	13.1244047484067	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACAGCTGGCTGTCTGTG	NA	False	NA	-7	True	AATAAA	-24	NA	127529319	127525004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527153_127528965
ES.32023.4	chr7	-	1746	5	NNC	ENSMUSG00000030800.11	novel	1852	6	NA	NA	-4	-119	intron_retention	FALSE	non_canonical	0	0	junction_4	13.1244047484067	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACACAGCTGGCTGTCTG	NA	False	NA	-9	True	AATAAA	-22	NA	127529271	127525006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528933
ES.32023.5	chr7	-	1942	5	ISM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	5	128	-4	-128	intron_retention	FALSE	canonical	3	26	junction_4	2.54950975679639	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTTTTTAACACAGCT	NA	False	NA	-18	True	AATAAA	-13	NA	127529271	127525015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728
ES.32024.1	chr7	-	2608	2	ISM	ENSMUSG00000070371.12	ENSMUST00000152697.3	1052	5	17	1	12	-1	intron_retention	FALSE	canonical	3	106	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534674	127531810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127532287_127532542
ES.32024.10	chr7	-	906	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534690	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
ES.32024.11	chr7	-	1678	4	NNC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	42.1979462375442	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534641	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533825
ES.32024.13	chr7	-	1167	5	NIC	ENSMUSG00000070371.12	novel	1132	6	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534685	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
ES.32024.15	chr7	-	1310	6	NNC	ENSMUSG00000070371.12	novel	1132	6	NA	NA	-4	-3	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	39.8547362304658	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534655	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533526_127533796_127534618
ES.32024.16	chr7	-	1002	5	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	40.5547469477988	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534695	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534673
ES.32024.18	chr7	-	1886	9	NNC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	-608	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.121323342314	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGACACGTGGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	127535877	127531818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533796_127534673_127534838_127534936_127535176_127535492_127535627_127535760
ES.32024.19	chr7	-	1329	2	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	1380	-9	intron_retention	FALSE	canonical	3	62	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGACACGTGGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	127533221	127531818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532665_127532738
ES.32024.20	chr7	-	573	2	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	935	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGACACGTGGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	127533666	127531818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127533561
ES.32024.21	chr7	-	1409	4	NNC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.4817969576542	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGACACGTGGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	127534596	127531818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127534043
ES.32024.5	chr7	-	1737	4	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	60	junction_3	21.2289111041209	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534696	127531810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127532542_127532665_127532738_127533800_127534618
ES.32024.6	chr7	-	783	4	NIC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	40.8683523306509	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534685	127531810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127532287_127532542_127532665_127533681_127533800_127534618
ES.32024.7	chr7	-	1572	5	NNC	ENSMUSG00000070371.12	novel	1016	5	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.6315685508005	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTGGCTTTGTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	127534633	127531810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534043
ES.32024.8	chr7	-	2874	1	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGTGGCTTTGTGGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	127534685	127531811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127531800_127534700
ES.32024.9	chr7	-	1047	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	-34	3	1	-3	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACGTGGCTTTGTGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	127534685	127531812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
ES.32025.1	chr7	+	174	1	Intergenic	novelGene_26232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAAAAAAAGAGTG	7499	False	NA	NA	False	NA	NA	NA	127537726	127537900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127537700_127537900
ES.32026.1	chr7	+	2828	1	Antisense	novelGene_ENSMUSG00000070371.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGGGTGTTAGCCAGG	8461	False	NA	NA	False	NA	NA	NA	127538688	127541516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127538700_127541500
ES.32026.2	chr7	+	170	1	Intergenic	novelGene_26233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAAAT	8776	False	NA	NA	False	NA	NA	NA	127539003	127539173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127539000_127539200
ES.32027.1	chr7	+	263	1	Intergenic	novelGene_26234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTATTATGTATGT	330	False	NA	NA	False	AAAAAG	-29	NA	127541644	127541907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127541600_127541900
ES.32028.1	chr7	+	184	1	Intergenic	novelGene_26235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAAGGAGTTCAAGG	3882	False	NA	NA	False	NA	NA	NA	127547092	127547276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127547100_127547300
ES.32029.1	chr7	+	176	1	Intergenic	novelGene_26236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127554751	127554927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127554800_127554900
ES.3203.1	chr10	+	2479	12	NNC	ENSMUSG00000069581.13	novel	2169	10	NA	NA	-37969	9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2.31416764751961	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGATGGTATCCTTTT	NA	False	NA	NA	False	NA	NA	NA	77662446	77722864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77662516_77665300_77665522_77700445_77700717_77702113_77702205_77703505_77703663_77705396_77705529_77706156_77706384_77708927_77709115_77710718_77710949_77716895_77717084_77719274_77719377_77722260
ES.32030.1	chr7	-	143	1	Intergenic	novelGene_26237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAACAAACCT	NA	False	NA	NA	False	NA	NA	NA	127558045	127557902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127557900_127558000
ES.32031.1	chr7	-	188	1	Intergenic	novelGene_26238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	127565341	127565153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127565200_127565300
ES.32032.1	chr7	+	1877	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	16	3643	16	26	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGGGTCCATGTTATT	1166	False	NA	63	True	AAAACA	-41	NA	127566644	127581230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.10	chr7	+	4926	13	NNC	ENSMUSG00000030795.19	novel	4909	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	359.64831394325	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1184	False	NA	34	True	ATTAAA	-17	NA	127566662	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127575093_127576389_127576508_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.11	chr7	+	1744	15	NNC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	2	75	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	375.002829921295	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCTCATGGATATTTTTT	1186	False	NA	6	True	NA	NA	NA	127566664	127581076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573527_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.12	chr7	+	1834	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	335.441804314299	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1186	False	NA	34	True	ATTAAA	-17	NA	127566664	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579288_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.13	chr7	+	3811	12	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	619	junction_3	196.891000596021	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1186	False	NA	34	True	ATTAAA	-17	NA	127566664	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362
ES.32032.15	chr7	+	1796	14	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	425.620243545789	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1186	False	NA	34	True	ATTAAA	-17	NA	127566664	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579291_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.17	chr7	+	4913	13	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	619	junction_3	224.540765910236	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1186	False	NA	37	True	ATTAAA	-20	NA	127566664	127581204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.18	chr7	+	1318	6	FSM	ENSMUSG00000030795.19	ENSMUST00000174196.8	2374	6	2	1054	2	-1054	multi-exon	FALSE	canonical	3	619	junction_3	88.8603398598047	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGACTATGACTTTGT	1186	False	NA	NA	False	NA	NA	NA	127566664	127572445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725
ES.32032.20	chr7	+	1756	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	335.441804314299	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1186	False	NA	34	True	ATTAAA	-17	NA	127566664	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579142_127579342_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.22	chr7	+	1064	8	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	382.870628760352	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTGTTTCCCCCAGT	1186	False	NA	33	True	ATTAAA	-16	NA	127566664	127581200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571801_127580574_127580728_127580962
ES.32032.23	chr7	+	5148	12	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	619	junction_3	204.307012537262	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1186	False	NA	37	True	ATTAAA	-20	NA	127566664	127581204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582
ES.32032.24	chr7	+	1818	15	NNC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	359.269241315064	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1187	False	NA	34	True	ATTAAA	-17	NA	127566665	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579413_127580362_127580464_127580582_127580728_127580962
ES.32032.26	chr7	+	1593	15	NNC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	54	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	375.681319846533	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTGTTTCCCCCAGT	1255	False	NA	33	True	ATTAAA	-16	NA	127566733	127581200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571456_127571866_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.27	chr7	+	2736	9	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	677	75	intron_retention	FALSE	canonical	3	1038	junction_1	121.280408558019	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCTCATGGATATTTTTT	6245	False	NA	6	True	NA	NA	NA	127571723	127581076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.28	chr7	+	3096	8	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	677	0	intron_retention	FALSE	canonical	3	1038	junction_1	95.0441358270043	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	6245	False	NA	34	True	ATTAAA	-17	NA	127571723	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582
ES.32032.29	chr7	+	1231	10	ISM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	5062	4	677	-1	3prime_fragment	FALSE	canonical	3	1038	junction_2	118.98874311318	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTGTTTCCCCCAGT	6245	False	NA	33	True	ATTAAA	-16	NA	127571723	127581200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.3	chr7	+	1471	13	NNC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	373.072258044232	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1180	False	NA	34	True	ATTAAA	-17	NA	127566658	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579123_127580674_127580728_127580962
ES.32032.30	chr7	+	1577	1	NIC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	859	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCCAAAAAAAACCAAA	6427	False	NA	NA	False	AAAACA	-30	NA	127571905	127573482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127571900_127573500
ES.32032.31	chr7	+	1024	10	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	871	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	484.821947716535	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTCTGTTTCCCCCAG	6439	False	NA	32	True	ATTAAA	-15	NA	127571917	127581199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577447_127579069_127579166_127579294_127579409_127580362_127580464_127580582_127580728_127580962
ES.32032.32	chr7	+	3531	6	ISM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	5690	3	-963	0	intron_retention	FALSE	canonical	3	1038	junction_1	38.2026177113558	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	6873	False	NA	34	True	ATTAAA	-17	NA	127572351	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294
ES.32032.33	chr7	+	2883	4	NNC	ENSMUSG00000030795.19	novel	4909	13	NA	NA	-839	0	intron_retention	FALSE	non_canonical	0	0	junction_3	515.901153322999	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	6997	False	NA	34	True	ATTAAA	-17	NA	127572475	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127575093_127576389_127576494_127577312_127577380_127581106
ES.32032.34	chr7	+	2562	7	NNC	ENSMUSG00000030795.19	novel	4909	13	NA	NA	-38	0	intron_retention	FALSE	canonical	1	4	junction_6	440.581055728304	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	7798	False	NA	34	True	ATTAAA	-17	NA	127573276	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580410_127580962
ES.32032.35	chr7	+	123	2	NNC	ENSMUSG00000030795.19	novel	4909	13	NA	NA	-213	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	65	False	NA	34	True	ATTAAA	-17	NA	127573933	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127573970_127581114
ES.32032.36	chr7	+	2167	4	ISM	ENSMUSG00000030795.19	ENSMUST00000128851.8	4909	13	11180	0	539	0	intron_retention	FALSE	canonical	3	1124	junction_1	98.3406776918325	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	3974	False	NA	34	True	ATTAAA	-17	NA	127577842	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127579166_127579294_127579419_127580362_127580464_127580582
ES.32032.37	chr7	+	2099	1	FSM	ENSMUSG00000030795.19	ENSMUST00000205351.2	2055	1	1799	-1843	-253	0	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	5234	False	NA	34	True	ATTAAA	-17	NA	127579102	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127579100_127581200
ES.32032.4	chr7	+	1826	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	316.653620390045	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1181	False	NA	34	True	ATTAAA	-17	NA	127566659	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580969
ES.32032.5	chr7	+	1711	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	31	3794	-2	78	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATGGATATTTTTTTTT	1181	False	NA	9	True	NA	NA	NA	127566659	127581079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.6	chr7	+	3462	14	NIC	ENSMUSG00000030795.19	novel	1831	15	NA	NA	-2	0	intron_retention	FALSE	canonical	3	245	junction_3	283.06513353376	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1181	False	NA	37	True	ATTAAA	-20	NA	127566659	127581204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.7	chr7	+	2962	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	32	2542	-1	1127	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCCCAGCATGTAAGTA	1182	False	NA	NA	False	NA	NA	NA	127566660	127582331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ES.32032.9	chr7	+	1798	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	394.850688648925	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTCCCCCAGTT	1184	False	NA	34	True	ATTAAA	-17	NA	127566662	127581201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577447_127579069_127579166_127579294_127579419_127580392_127580464_127580582_127580728_127580962
ES.32033.1	chr7	-	2903	1	Genic_Genomic	ENSMUSG00000030793.5	novel	NA	NA	NA	NA	2351	1434	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATATTTGCCTTTCTA	NA	False	NA	NA	False	AATAGA	-13	NA	127590348	127587445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_127587400_127590300
ES.32033.2	chr7	-	4295	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	150	-645	150	645	multi-exon	FALSE	canonical	3	1219	junction_2	45	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCTGAGTTGACAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	127592889	127588234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32033.3	chr7	-	4491	2	ISM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	130	-610	130	610	intron_retention	FALSE	canonical	3	1309	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127592909	127588269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127592138_127592286
ES.32033.4	chr7	-	3676	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	128	-4	128	4	multi-exon	FALSE	canonical	3	1219	junction_2	45	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGCCTTTTTTCTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	127592911	127588875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32033.5	chr7	-	2515	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	137	1148	137	784	multi-exon	FALSE	canonical	3	1219	junction_2	45	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGTAAACTCCAGTAA	NA	False	NA	NA	False	NA	NA	NA	127592902	127590027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32033.6	chr7	-	1583	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	123	2094	123	-162	multi-exon	FALSE	canonical	3	1219	junction_2	45	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACAAACTCCAGAGTT	NA	False	NA	NA	False	TATAAA	-27	NA	127592916	127590973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32033.7	chr7	-	1293	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	118	2389	118	-457	multi-exon	FALSE	canonical	3	1219	junction_2	45	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAAGCCTTTTTTTTTT	NA	False	NA	-5	True	NA	NA	NA	127592921	127591268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32033.8	chr7	-	796	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	85	2919	85	-987	multi-exon	FALSE	canonical	3	1219	junction_2	45	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGTTTTTGCTGAGCTA	NA	False	NA	1	True	AAAACA	-24	NA	127592954	127591798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127592138_127592286_127592344_127592554
ES.32034.1	chr7	+	5733	1	Antisense	novelGene_ENSMUSG00000108437.2_AS_novelGene_ENSMUSG00000108696.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTCTTTGTGTTCTG	8405	False	NA	NA	False	NA	NA	NA	127611604	127617337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_127611600_127617300
ES.32035.1	chr7	+	3320	5	NNC	ENSMUSG00000030786.19	novel	3325	28	NA	NA	17450	90	intron_retention	FALSE	non_canonical	0	0	junction_1	2.9474565306379	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGTGGTACACACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	127679364	127717753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127680345_127714622_127715274_127715373_127715676_127715907_127716019_127716477
ES.32035.2	chr7	+	4057	24	ISM	ENSMUSG00000030786.19	ENSMUST00000106242.10	4649	30	17530	7	17456	-7	3prime_fragment	TRUE	canonical	0	0	junction_19	2.09148060361838	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTACATATGTATAAG	NA	False	NA	NA	False	NA	NA	NA	127679370	127717655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127679564_127680776_127680931_127682847_127682999_127684105_127684180_127684714_127684845_127685101_127685245_127700587_127700729_127700808_127701019_127706799_127706931_127707011_127707176_127711299_127711455_127711546_127711679_127711832_127711907_127712128_127712271_127712362_127712489_127712989_127713070_127713907_127713992_127714290_127714367_127714939_127715048_127715189_127715274_127715373_127715488_127715573_127715676_127715907_127716019_127716477
ES.32035.4	chr7	+	3926	24	ISM	ENSMUSG00000030786.19	ENSMUST00000064821.14	4682	30	17571	130	17468	-129	3prime_fragment	FALSE	canonical	0	0	junction_7	2.165199930085	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTCAGAGAATTACCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	127679382	127717533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_127679564_127680776_127680931_127682847_127682999_127684105_127684180_127684714_127684845_127685101_127685245_127700587_127700729_127700805_127701019_127706799_127706931_127707011_127707176_127711299_127711455_127711546_127711679_127711832_127711907_127712128_127712271_127712362_127712489_127712989_127713070_127713907_127713992_127714290_127714367_127714939_127715048_127715189_127715274_127715373_127715488_127715573_127715676_127715907_127716019_127716477
ES.32036.1	chr7	-	157	1	Intergenic	novelGene_26239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	127692708	127692551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127692600_127692700
ES.32037.1	chr7	-	614	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	65	1	65	-1	multi-exon	FALSE	canonical	3	110	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTCTTGTGTTAGTTC	5448	False	NA	NA	False	AATACA	-19	NA	127805494	127804607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127804985_127805071_127805209_127805394
ES.32037.2	chr7	-	573	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-72	179	-72	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5311	False	NA	-6	True	AATAAA	-14	NA	127805631	127804785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127804985_127805071_127805209_127805394
ES.32038.1	chr7	-	159	1	Intergenic	novelGene_26240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	127812370	127812211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_127812200_127812400
ES.32039.1	chr7	+	3899	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	-65	0	-50	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127836463	127844272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ES.32039.10	chr7	+	2726	6	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1288	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.6471214969498	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCTGCTGTGTGGGGTC	NA	False	NA	5	True	ATTAAA	-16	NA	127837816	127844267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127837947_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ES.32039.2	chr7	+	4015	6	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	-45	-7	intron_retention	TRUE	non_canonical	0	0	junction_5	38.420827684994	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCTGCTGTGTGGGG	NA	False	NA	3	True	ATTAAA	-14	NA	127836468	127844265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842709_127843132
ES.32039.3	chr7	+	3386	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	-33	1	intron_retention	FALSE	canonical	3	7	junction_3	39.1942278913618	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGGGTCGTCTGT	NA	False	NA	11	True	ATTAAA	-22	NA	127836480	127844273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127842511_127842645_127843196
ES.32039.4	chr7	+	3908	6	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_5	38.420827684994	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127836480	127844272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843170
ES.32039.5	chr7	+	4538	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	88	junction_1	5.7227615711298	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGGTCGTCT	NA	False	NA	9	True	ATTAAA	-20	NA	127836486	127844271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127842645_127843196
ES.32039.6	chr7	+	5154	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	-20	-7	intron_retention	FALSE	canonical	3	92	junction_2	3.76662979332984	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCTGCTGTGTGGGG	NA	False	NA	3	True	ATTAAA	-14	NA	127836493	127844265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ES.32039.7	chr7	+	5136	3	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	763	-1	intron_retention	FALSE	canonical	3	88	junction_1	6	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGGTCGTCT	NA	False	NA	9	True	ATTAAA	-20	NA	127837291	127844271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127837762_127839053_127842645_127843196
ES.32039.8	chr7	+	4674	4	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1133	0	intron_retention	FALSE	canonical	3	88	junction_1	6.18241233033047	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837661	127844272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_127837762_127839053_127839162_127839254_127842645_127843196
ES.32039.9	chr7	+	4839	4	NNC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1285	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	48.0832611206852	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTGTGGGGTCGTC	NA	False	NA	8	True	ATTAAA	-19	NA	127837813	127844270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127837951_127839053_127839162_127839254_127842699_127843120
ES.3204.1	chr10	-	310	1	Intergenic	novelGene_2516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAAAAACACCAAAAAAAA	5732	False	NA	NA	False	NA	NA	NA	77691556	77691246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77691200_77691600
ES.32040.1	chr7	-	3840	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	-255	-11	-255	11	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTTACTATTTGGT	5018	False	NA	NA	False	AATAAA	-25	NA	127837458	127833618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127833600_127837500
ES.32041.1	chr7	+	1764	11	NNC	ENSMUSG00000030782.18	novel	1746	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.09544511501033	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCCAGAGAACCTTGC	4177	False	NA	NA	False	CATAAA	-18	NA	127846131	127852883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_127846181_127847348_127847465_127847595_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ES.32042.1	chr7	-	2623	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	20	-16	20	16	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTCTGGCCTCTGTGGG	1126	False	NA	0	True	AGTAAA	-32	NA	127897322	127870534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.10	chr7	-	4832	8	NIC	ENSMUSG00000030780.16	novel	3302	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	7	junction_7	55.1942765444508	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	1171	False	NA	-17	True	AGTAAA	-15	NA	127897277	127870551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896961
ES.32042.11	chr7	-	2684	12	FSM	ENSMUSG00000030780.16	ENSMUST00000155177.8	1921	12	-36	-727	26	-1	multi-exon	FALSE	canonical	3	141	junction_4	13.3106556457227	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	1132	False	NA	-17	True	AGTAAA	-15	NA	127897316	127870551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.12	chr7	-	2438	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	77	112	2	-112	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTAGGTCTACACC	1183	False	NA	-128	True	ATTAAA	-33	NA	127897265	127870662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.13	chr7	-	1780	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	21	826	21	-98	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACACCCTCGACTTTA	1127	False	NA	86	True	NA	NA	NA	127897321	127871376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.15	chr7	-	3890	11	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	-24	27	intron_retention	FALSE	canonical	3	145	junction_3	12.6	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCTTGCCCTGTTCCTT	1143	False	NA	-8	True	NA	NA	NA	127897305	127871470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.16	chr7	-	1616	13	NNC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	3	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.8265119587422	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTGTATTCTTGCC	1184	False	NA	-17	True	NA	NA	NA	127897264	127871479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127871788_127872643_127872722_127872826_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.18	chr7	-	974	7	NNC	ENSMUSG00000030780.16	novel	464	3	NA	NA	26	3521	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.0124751406194	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGATACCCTTGGGCA	1132	False	NA	NA	False	AATAAA	-21	NA	127897316	127883615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127883833_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.19	chr7	-	823	7	NNC	ENSMUSG00000030780.16	novel	464	3	NA	NA	2	3408	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.0124751406194	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACATGTTACCTGTGTC	1170	False	NA	NA	False	CATAAA	-20	NA	127897278	127883728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127883833_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.2	chr7	-	4876	10	NIC	ENSMUSG00000030780.16	novel	3302	11	NA	NA	3	12	intron_retention	FALSE	canonical	3	145	junction_3	12.4454364683963	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGCCTCTGGCCTCTG	1171	False	NA	-4	True	AGTAAA	-28	NA	127897277	127870538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.20	chr7	-	2950	5	ISM	ENSMUSG00000030780.16	ENSMUST00000126263.8	1625	13	-14	13608	0	2031	5prime_fragment	FALSE	canonical	3	151	junction_1	12.9107513336754	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGCTATACTTAAGCTT	1167	False	NA	NA	False	AATAAA	-16	NA	127897281	127885105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.21	chr7	-	915	5	ISM	ENSMUSG00000030780.16	ENSMUST00000126263.8	1625	13	-10	15639	3	0	5prime_fragment	FALSE	canonical	3	151	junction_1	12.9107513336754	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTGCATGGATGACCCA	1171	False	NA	NA	False	AGTAAA	-15	NA	127897277	127887136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.3	chr7	-	3414	12	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	0	10	intron_retention	FALSE	canonical	3	141	junction_3	13.8253569888003	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCAGGCCTCTGGCCTC	1167	False	NA	-6	True	AGTAAA	-26	NA	127897281	127870540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.4	chr7	-	2654	12	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	2	9	intron_retention	FALSE	canonical	3	141	junction_4	13.331129294417	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCAGGCCTCTGGCCT	1170	False	NA	-7	True	AGTAAA	-25	NA	127897278	127870541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.5	chr7	-	4059	11	NIC	ENSMUSG00000030780.16	novel	1921	12	NA	NA	-20	7	intron_retention	FALSE	canonical	3	150	junction_3	11.883181392203	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTGCAGGCCTCTGGC	1147	False	NA	-9	True	AGTAAA	-23	NA	127897301	127870543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.6	chr7	-	5079	9	NIC	ENSMUSG00000030780.16	novel	3302	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	145	junction_3	10.9480306448238	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	1168	False	NA	-17	True	AGTAAA	-15	NA	127897280	127870551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633
ES.32042.7	chr7	-	3481	11	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	141	junction_3	13.5753452994758	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	1171	False	NA	-17	True	AGTAAA	-15	NA	127897277	127870551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_127871788_127872643_127872722_127872822_127873876_127875257_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ES.32042.8	chr7	-	586	3	NNC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.5	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	1165	False	NA	-17	True	AGTAAA	-15	NA	127897283	127870551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_127870774_127896706_127896749_127896961
ES.32043.1	chr7	-	712	3	FSM	ENSMUSG00000030844.12	ENSMUST00000134144.2	458	3	8	-262	8	-2	multi-exon	FALSE	canonical	1	3	junction_2	8	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTTAGTCATTTCTAC	9759	False	NA	NA	False	ATTAAA	-22	NA	127995401	127975346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_127975767_127990687_127990832_127995253
ES.32044.1	chr7	+	180	1	Intergenic	novelGene_26241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAGGAAC	8479	False	NA	NA	False	NA	NA	NA	127997572	127997752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_127997600_127997800
ES.32045.1	chr7	-	4414	13	FSM	ENSMUSG00000030846.16	ENSMUST00000106228.8	2835	13	56	-1635	35	9	multi-exon	FALSE	canonical	3	12	junction_12	81.5772895275803	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGTGTTGTTCATTGTG	NA	False	NA	3	True	AATAAA	-25	NA	128063341	128041491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
ES.32045.10	chr7	-	4713	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	-2	-445	-2	-3	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTTCTCTTAGTG	NA	False	NA	-9	True	AATAAA	-13	NA	128063378	128041503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.11	chr7	-	4420	13	NNC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	13	-3	intron_retention	TRUE	canonical	0	0	junction_11	84.4378058428543	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTTCTCTTAGTG	NA	False	NA	-9	True	AATAAA	-13	NA	128063363	128041503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056749_128060316_128060381_128062848
ES.32045.12	chr7	-	5978	4	NIC	ENSMUSG00000030846.16	novel	784	9	NA	NA	-1117	-3	intron_retention	FALSE	canonical	3	231	junction_1	8.5764535535124	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTTCTCTTAGTG	NA	False	NA	-9	True	AATAAA	-13	NA	128048546	128041503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374
ES.32045.13	chr7	-	3656	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-250	-1826	47	-229	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTAAAGGCTTTTTAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	128063329	128042177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.14	chr7	-	2414	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-302	-532	-5	47	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAACTACAGTGTTTCA	NA	False	NA	NA	False	GATAAA	-13	NA	128063381	128043471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.15	chr7	-	3577	11	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	48	24	intron_retention	FALSE	canonical	3	33	junction_6	62.1971864315421	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAGAAATGGGTAATACA	NA	False	NA	NA	False	AATAAA	-39	NA	128063328	128043979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.16	chr7	-	4840	1	FSM	ENSMUSG00000030846.16	ENSMUST00000205774.2	1808	1	1464	-4496	1240	13	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATATAATAGGAGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	128048830	128043990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044000_128048800
ES.32045.17	chr7	-	5128	9	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	68	13	intron_retention	FALSE	canonical	3	33	junction_4	65.5610402602033	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATATAATAGGAGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	128063308	128043990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047995_128048454_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.18	chr7	-	4347	9	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	-1	13	intron_retention	FALSE	canonical	3	16	junction_4	70.9452914223347	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATATAATAGGAGAAA	NA	False	NA	NA	False	AATAAA	-28	NA	128063080	128043990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128048832_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.19	chr7	-	1898	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-308	-10	9	10	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTGATATAATAGGAG	NA	False	NA	NA	False	AATAAA	-25	NA	128063387	128043993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.2	chr7	-	4371	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	-283	-2508	14	5	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTAGTGTTGTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	128063362	128041495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.20	chr7	-	3369	10	NIC	ENSMUSG00000030846.16	novel	4266	11	NA	NA	-1	10	intron_retention	FALSE	canonical	3	163	junction_5	26.5078604694281	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTGATATAATAGGAG	NA	False	NA	NA	False	AATAAA	-25	NA	128063377	128043993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.21	chr7	-	4598	3	FSM	ENSMUSG00000030846.16	ENSMUST00000152328.3	560	3	-2022	-2016	619	7	multi-exon	FALSE	canonical	3	242	junction_1	5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATTTTGATATAATAG	NA	False	NA	NA	False	AATAAA	-22	NA	128049451	128043996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128046422_128046535_128046632_128047374
ES.32045.22	chr7	-	4097	10	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	18	junction_8	69.6995315002764	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063361	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ES.32045.23	chr7	-	4467	10	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	33	junction_5	62.5503254178309	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063095	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.24	chr7	-	5605	8	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	38	0	intron_retention	FALSE	canonical	3	185	junction_7	20.985903918233	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063338	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.25	chr7	-	9326	4	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	2358	0	intron_retention	FALSE	canonical	3	231	junction_1	8.5764535535124	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128054394	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374
ES.32045.26	chr7	-	4481	9	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	185	junction_8	24.0204990580962	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063361	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.27	chr7	-	3406	12	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	15	0	intron_retention	FALSE	canonical	1	1	junction_2	84.0325596086432	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063361	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045825_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.28	chr7	-	5140	9	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	68	0	intron_retention	FALSE	canonical	3	185	junction_8	19.7610728453695	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063308	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.29	chr7	-	3562	3	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	1244	0	intron_retention	FALSE	canonical	3	242	junction_2	11	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128048826	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046422_128046535
ES.32045.3	chr7	-	5743	11	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	45	1	intron_retention	FALSE	canonical	3	185	junction_10	24.6951412225158	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTCTCTTAGTGTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	128062888	128041499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.30	chr7	-	8440	5	ISM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	8721	2055	2097	0	intron_retention	FALSE	canonical	3	231	junction_2	12.1937483982572	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128054655	128044003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374
ES.32045.31	chr7	-	3483	11	NIC	ENSMUSG00000030846.16	novel	4451	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	18	junction_9	66.3295560063536	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGACTATAAATTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	128063083	128044005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ES.32045.32	chr7	-	4044	10	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	13	-4	intron_retention	FALSE	canonical	3	185	junction_9	22.6525010201773	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTGACTATAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	128063363	128044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.34	chr7	-	1649	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	295	2507	-22	-4	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTGACTATAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	128063101	128044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ES.32045.35	chr7	-	1647	13	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	7	junction_8	79.2973920686481	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTGACTATAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	128063082	128044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048523_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.36	chr7	-	1918	13	FSM	ENSMUSG00000030846.16	ENSMUST00000106228.8	2835	13	36	881	15	-4	multi-exon	FALSE	canonical	3	12	junction_12	81.5772895275803	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTGACTATAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	128063361	128044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
ES.32045.37	chr7	-	1770	13	NNC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	14	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	66.4515278647192	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTCTGACTATAAATTT	NA	False	NA	NA	False	AATAAA	-11	NA	128063362	128044007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848_128063090_128063178
ES.32045.38	chr7	-	2790	12	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	-9	-5	intron_retention	FALSE	canonical	1	1	junction_2	85.8914363774131	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTCTGACTATAAATT	NA	False	NA	NA	False	AATAAA	-10	NA	128063088	128044008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128045671_128045765_128045825_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.39	chr7	-	2135	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	46	2085	46	1	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063330	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.4	chr7	-	4188	14	NIC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	42	0	intron_retention	FALSE	canonical	3	7	junction_8	104.351080152503	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCTCTTAGTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	128063005	128041500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048523_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128060320_128060381_128062848
ES.32045.40	chr7	-	2495	12	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	63	1	intron_retention	FALSE	canonical	3	16	junction_7	81.0345299321364	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063313	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048832_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.41	chr7	-	2674	8	NIC	ENSMUSG00000030846.16	novel	784	9	NA	NA	-52	1	intron_retention	FALSE	canonical	3	7	junction_6	97.0062064077998	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128050122	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048523_128049844_128049933_128050065
ES.32045.42	chr7	-	3340	10	NIC	ENSMUSG00000030846.16	novel	4451	12	NA	NA	39	1	intron_retention	FALSE	canonical	3	18	junction_8	67.2966530086961	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063337	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ES.32045.43	chr7	-	2706	11	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	-9	1	intron_retention	FALSE	canonical	3	163	junction_6	26.642822673283	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063088	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.44	chr7	-	5549	7	NNC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	2811	1	intron_retention	FALSE	canonical	0	0	junction_6	101.480156790489	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128053941	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128046422_128046535_128046632_128047374_128047995_128048454_128049933_128050065_128050121_128050344_128050444_128053128
ES.32045.45	chr7	-	1568	13	NNC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	46	1	intron_retention	FALSE	canonical	0	0	junction_10	85.274882325076	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063001	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128053128_128053225_128056659_128056757_128062848
ES.32045.46	chr7	-	1673	14	NIC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	-4	1	intron_retention	FALSE	canonical	3	7	junction_8	99.1746412519633	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACTAAAATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	128063074	128044033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128048454_128048523_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
ES.32045.5	chr7	-	7710	9	NIC	ENSMUSG00000030846.16	novel	4266	11	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	185	junction_8	19.7610728453695	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	-8	True	AATAAA	-14	NA	128063377	128041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.6	chr7	-	4424	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	25	2	5	-2	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	-8	True	AATAAA	-14	NA	128063371	128041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ES.32045.7	chr7	-	6937	9	NIC	ENSMUSG00000030846.16	novel	4266	11	NA	NA	60	-2	intron_retention	FALSE	canonical	3	185	junction_8	24.0204990580962	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	-8	True	AATAAA	-14	NA	128063316	128041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ES.32045.8	chr7	-	4485	14	NNC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	70	-2	intron_retention	FALSE	canonical	0	0	junction_10	95.0944096441117	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	-8	True	AATAAA	-14	NA	128063306	128041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128052167_128052249_128053128_128053225_128056659_128056757_128062848
ES.32045.9	chr7	-	4173	13	NNC	ENSMUSG00000030846.16	novel	2835	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_10	85.274882325076	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCTTTCTCTTAGTGT	NA	False	NA	-8	True	AATAAA	-14	NA	128063071	128041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128053124_128053225_128056659_128056757_128062848
ES.32046.1	chr7	+	3543	3	NNC	ENSMUSG00000108668.2	novel	496	4	NA	NA	-121	-9984	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCTTGTAATGTATTTA	956	False	NA	NA	False	NA	NA	NA	128063670	128067310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128065836_128065877_128066373_128066427
ES.32047.1	chr7	-	5714	2	NNC	ENSMUSG00000108626.2	novel	1174	5	NA	NA	6069	-240	intron_retention	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	128095842	128089908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128091277_128091496
ES.32048.1	chr7	+	2536	5	NNC	ENSMUSG00000030847.9	novel	2562	4	NA	NA	-2903	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.4648658313239	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	4239	False	NA	17	True	AATAAA	-22	NA	128122436	128148705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128122546_128125474_128125769_128141696_128142036_128143530_128143933_128147313
ES.32048.2	chr7	+	2642	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	-80	0	-80	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7062	False	NA	17	True	AATAAA	-22	NA	128125259	128148705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ES.32048.3	chr7	+	5943	3	ISM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	0	0	0	0	intron_retention	FALSE	canonical	3	128	junction_2	10	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7142	False	NA	17	True	AATAAA	-22	NA	128125339	128148705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128125769_128141696_128142036_128143530
ES.32048.4	chr7	+	1790	2	ISM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	18189	6	18189	-6	3prime_fragment	FALSE	canonical	3	140	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATGTTTTTTTGTGGT	1589	False	NA	11	True	AATAAA	-16	NA	128143528	128148699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128143933_128147313
ES.32048.5	chr7	+	3234	1	Intergenic	novelGene_26243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTCCAGCTTTCTTGC	2028	False	NA	NA	False	NA	NA	NA	128143967	128147201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_128144000_128147200
ES.32049.1	chr7	-	137	1	Intergenic	novelGene_26242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAACAACAACAAC	1265	False	NA	NA	False	NA	NA	NA	128139037	128138900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_128138900_128139000
ES.3205.1	chr10	-	1994	2	FSM	ENSMUSG00000051652.5	ENSMUST00000057608.5	4296	2	66	2236	66	-2236	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGTCGTCATCGAGT	4376	False	NA	NA	False	NA	NA	NA	77738304	77735644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77737567_77738232
ES.32050.1	chr7	-	173	1	Intergenic	novelGene_26244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAACCAAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	128160798	128160625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_128160600_128160800
ES.32051.1	chr7	+	175	1	Intergenic	novelGene_26245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	2883	False	NA	NA	False	NA	NA	NA	128191439	128191614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_128191400_128191600
ES.32052.1	chr7	+	4822	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	-76	-12	-44	12	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTTTTTTTTTTTTTT	7100	False	NA	NA	False	ATTAAA	-15	NA	128213007	128298161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.10	chr7	+	1470	9	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	32	1505	0	1341	5prime_fragment	FALSE	canonical	3	45	junction_6	9.36416040016402	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATACTCTCGAATCAGC	7176	False	NA	NA	False	ATTAAA	-39	NA	128213083	128271841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654
ES.32052.11	chr7	+	4511	19	NIC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	15.9764487161649	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7176	False	NA	15	True	ATTAAA	-21	NA	128213083	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.12	chr7	+	4544	20	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.7696366617374	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7176	False	NA	15	True	ATTAAA	-21	NA	128213083	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269359_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.13	chr7	+	4634	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.9156605839762	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACATCAGCGTATGAG	7177	False	NA	9	True	ATTAAA	-15	NA	128213084	128297992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128226307_128226368_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266028_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.14	chr7	+	5359	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	2	-627	2	627	multi-exon	FALSE	canonical	3	45	junction_6	8.64088073894081	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGTATGAACATTATTT	7178	False	NA	NA	False	TATAAA	-19	NA	128213085	128298776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.15	chr7	+	2548	8	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	34	1762	2	1084	5prime_fragment	FALSE	canonical	3	45	junction_6	9.98570406702931	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAGCGTAGGCACGCG	7178	False	NA	NA	False	NA	NA	NA	128213085	128271584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137
ES.32052.16	chr7	+	4525	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.6313786979908	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7186	False	NA	15	True	ATTAAA	-21	NA	128213093	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213235_128213282_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.18	chr7	+	4663	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.9781755923808	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7201	False	NA	15	True	ATTAAA	-21	NA	128213108	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128237881_128237963_128242341_128242447_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.19	chr7	+	4816	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	32	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.9781755923808	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCCTTTTTTTTTTTTTT	7208	False	NA	NA	False	ATTAAA	-12	NA	128213115	128298158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128237881_128237963_128242341_128242447_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.20	chr7	+	6039	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	108	-1413	108	1413	multi-exon	FALSE	canonical	3	45	junction_6	8.64088073894081	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATCACAGTGTGTTTT	7284	False	NA	NA	False	NA	NA	NA	128213191	128299562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.21	chr7	+	4514	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	292	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7202941154538	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTTTTTTTTTTTTTT	7468	False	NA	NA	False	ATTAAA	-15	NA	128213375	128298161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128226307_128226368_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.22	chr7	+	4252	19	ISM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	24797	151	-22851	0	3prime_fragment	FALSE	canonical	3	45	junction_5	8.56925310429282	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	348	False	NA	15	True	ATTAAA	-21	NA	128237880	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.23	chr7	+	3104	10	ISM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	65368	155	-2958	-4	3prime_fragment	FALSE	canonical	3	45	junction_2	8.33999733546454	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCAGCGTATGAGAA	NA	False	NA	11	True	ATTAAA	-17	NA	128278451	128297994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.24	chr7	+	2868	7	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	-2762	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.2712150209884	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCAAACACTTGTTTTG	NA	False	NA	94	True	CATAAA	-14	NA	128286507	128298077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128286632_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295461_128295899
ES.32052.25	chr7	+	763	1	Antisense	novelGene_ENSMUSG00000048170.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTTCCCCACCCCGAAA	NA	False	NA	NA	False	NA	NA	NA	128298576	128299339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_128298600_128299300
ES.32052.3	chr7	+	4612	20	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.7696366617374	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTATGAGAATTTCTTGT	7149	False	NA	19	True	ATTAAA	-25	NA	128213056	128298002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266028_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.4	chr7	+	4760	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.5843687669529	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	7152	False	NA	15	True	ATTAAA	-21	NA	128213059	128297998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128234435_128234589_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.5	chr7	+	1549	8	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	9	2786	9	60	5prime_fragment	FALSE	canonical	3	45	junction_6	9.98570406702931	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATCAGGTGCCAG	7153	False	NA	NA	False	NA	NA	NA	128213060	128270560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137
ES.32052.6	chr7	+	4912	21	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	-13	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.5843687669529	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTTTTTTTTTTTTTT	7163	False	NA	NA	False	ATTAAA	-15	NA	128213070	128298161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128234435_128234589_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.7	chr7	+	4655	20	NNC	ENSMUSG00000042105.19	novel	4734	20	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.877474069432	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCGTATGAGAATTTCTT	7163	False	NA	17	True	ATTAAA	-23	NA	128213070	128298000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265548_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ES.32052.8	chr7	+	2123	9	ISM	ENSMUSG00000042105.19	ENSMUST00000098007.11	1906	10	28	856	-4	-856	5prime_fragment	FALSE	canonical	3	45	junction_6	9.36416040016402	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATACTTTTCTTTTTGA	7172	False	NA	NA	False	AATAAA	-15	NA	128213079	128272490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654
ES.32053.1	chr7	+	4568	1	FSM	ENSMUSG00002075186.1	ENSMUST00020182831.1	102	1	-4468	2	-4468	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128331457	128336025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128331500_128336000
ES.32053.2	chr7	+	4111	1	Intergenic	novelGene_26247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128331457	128335568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_128331500_128335600
ES.32054.1	chr7	+	4724	2	Antisense	novelGene_ENSMUSG00000048170.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCATTCTCCCGGAT	NA	False	NA	NA	False	NA	NA	NA	128336351	128341381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_128337233_128337538
ES.32055.1	chr7	+	1027	1	Antisense	novelGene_ENSMUSG00000048170.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGTCTGATCATCTG	1059	False	NA	NA	False	ATTAAA	-13	NA	128341488	128342515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_128341500_128342500
ES.32056.1	chr7	-	3318	5	Antisense	novelGene_ENSMUSG00000081339.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAAAGTCCACAAATAC	2273	False	NA	NA	False	NA	NA	NA	128295836	128285499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_128285721_128285917_128287007_128292348_128292420_128293471_128293547_128293974
ES.32057.1	chr7	-	6424	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	19	-2206	10	2206	multi-exon	TRUE	canonical	3	440	junction_10	48.8278608992858	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCCTTGGTTTTGAGAT	3881	False	NA	-16	True	ATTAAA	-20	NA	128342200	128295958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.10	chr7	-	3873	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	-1	365	-1	-365	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGGCCATTTTTCATGA	3861	False	NA	NA	False	AATAAA	-19	NA	128342220	128298529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.11	chr7	-	3737	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	-8	508	-8	-508	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTTTTTAGTTTTAT	3854	False	NA	15	True	AATAAA	-43	NA	128342227	128298672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.12	chr7	-	7014	15	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	0	-524	intron_retention	FALSE	non_canonical	0	0	junction_4	145.00710749646	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTTGTCCTAGAACA	3862	False	NA	-1	True	AATAAA	-27	NA	128342219	128298688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128305353_128306202_128306490_128306678_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.14	chr7	-	3565	15	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	40	-532	intron_retention	FALSE	canonical	1	1	junction_1	193.591894015662	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGCATTTTCTTTGTC	3911	False	NA	-9	True	AATAAA	-19	NA	128342170	128298696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311507_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.15	chr7	-	3729	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-47	-537	intron_retention	FALSE	non_canonical	0	0	junction_3	140.243534214198	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAAATGCATTTTCT	3815	False	NA	-14	True	AATAAA	-14	NA	128342266	128298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305236_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.16	chr7	-	3673	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	6	-537	intron_retention	FALSE	canonical	0	0	junction_10	189.592498679551	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAAATGCATTTTCT	3877	False	NA	-14	True	AATAAA	-14	NA	128342204	128298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306354_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317666_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.17	chr7	-	3532	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-2	-537	intron_retention	FALSE	non_canonical	0	0	junction_1	180.701929984159	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAAATGCATTTTCT	3869	False	NA	-14	True	AATAAA	-14	NA	128342212	128298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128299331_128299487_128300295_128301042_128301132_128303966_128304128_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.18	chr7	-	5631	14	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	-537	intron_retention	FALSE	canonical	3	440	junction_8	46.7589816705187	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAAATGCATTTTCT	3868	False	NA	-14	True	AATAAA	-14	NA	128342213	128298701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128300295_128301042_128301132_128303966_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.2	chr7	-	5324	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	36	-1123	27	1123	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCGTGTCTGGCAT	3898	False	NA	NA	False	AATAAA	-32	NA	128342183	128297041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.21	chr7	-	3245	3	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	1650	-538	intron_retention	FALSE	non_canonical	0	0	junction_2	282.5	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGAAAATGCATTTTC	NA	False	NA	-15	True	AATAAA	-13	NA	128302911	128298702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301605_128301820
ES.32057.22	chr7	-	5744	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	-539	intron_retention	FALSE	canonical	1	3	junction_12	181.262402592898	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAAATGCATTTT	3868	False	NA	-16	True	AATAAA	-12	NA	128342213	128298703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128320260_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.23	chr7	-	3597	15	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	3	-542	intron_retention	FALSE	canonical	2	4	junction_14	146.056950033407	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATTTTTGAAAATGCAT	3874	False	NA	-19	True	AATAAA	-9	NA	128342207	128298706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128341856
ES.32057.24	chr7	-	3308	11	ISM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	23499	1101	-2138	225	3prime_fragment	FALSE	canonical	3	440	junction_10	59.3932656115152	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCTCCCTGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	128318720	128299265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669
ES.32057.25	chr7	-	3016	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	6	1215	-3	111	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACTTAAACAGTCAAGT	3868	False	NA	97	True	NA	NA	NA	128342213	128299379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.28	chr7	-	2925	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	-13	1325	-13	1	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCCTTAACTTTT	3849	False	NA	-13	True	NA	NA	NA	128342232	128299489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.29	chr7	-	2987	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_14	142.338501077147	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCCTTAACTTTT	3878	False	NA	-13	True	NA	NA	NA	128342203	128299489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326745_128326923_128341856
ES.32057.3	chr7	-	6803	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	520	intron_retention	FALSE	canonical	1	3	junction_12	181.262402592898	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGCAGCAAGTTATT	3868	False	NA	NA	False	AATAAA	-11	NA	128342213	128297644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128320260_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.34	chr7	-	568	4	NNC	ENSMUSG00000048170.15	novel	2347	17	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248.967199981577	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGTCCTTAACTTT	3912	False	NA	-14	True	NA	NA	NA	128342169	128299490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128299543_128325815_128325933_128326836_128326923_128341856
ES.32057.35	chr7	-	3567	15	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	185	0	intron_retention	FALSE	canonical	3	440	junction_9	48.3849360939572	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGTCCTTAACTTT	4056	False	NA	-14	True	NA	NA	NA	128342025	128299490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.37	chr7	-	3839	15	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	192.233183760701	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGTCCTTAACTTT	3864	False	NA	-14	True	NA	NA	NA	128342217	128299490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301128_128303966_128304132_128305218_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317899_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.39	chr7	-	4019	15	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	440	junction_9	47.7575189079678	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACATTGTCCTTAACTT	3840	False	NA	-15	True	NA	NA	NA	128342241	128299491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128300295_128301042_128301132_128303966_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.4	chr7	-	1268	1	Genic_Genomic	ENSMUSG00000048170.15	novel	NA	NA	NA	NA	1921	410	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGATGTTTTCCATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	128299022	128297754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_128297800_128299000
ES.32057.40	chr7	-	3923	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_12	181.746346249381	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACATTGTCCTTAACT	3868	False	NA	-16	True	NA	NA	NA	128342213	128299492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128321292_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.41	chr7	-	5067	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	47	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	142.19479596666	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACATTGTCCTTAACT	3918	False	NA	-16	True	NA	NA	NA	128342163	128299492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306490_128306678_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.42	chr7	-	3023	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_5	183.922782285801	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACATTGTCCTTAAC	3862	False	NA	-17	True	NA	NA	NA	128342219	128299493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128307361_128307477_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.43	chr7	-	2511	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	-13	1739	-13	7	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCACACCATTTTCTTA	3849	False	NA	NA	False	ATTAAA	-22	NA	128342232	128299903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.45	chr7	-	2215	16	Fusion	ENSMUSG00000048170.15_ENSMUSG00000108720.2	novel	4237	16	NA	NA	527	0	multi-exon	FALSE	canonical	0	0	junction_15	142.154782621698	510	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGCTGATCACACCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	128346473	128299910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128346386
ES.32057.48	chr7	-	5480	14	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	31	0	intron_retention	FALSE	canonical	3	452	junction_7	44.4978558089896	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGCTGATCACACCAT	3902	False	NA	NA	False	ATTAAA	-15	NA	128342179	128299910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.49	chr7	-	2470	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	141.958616818032	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGCTGATCACACCAT	3868	False	NA	NA	False	ATTAAA	-15	NA	128342213	128299910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306354_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.5	chr7	-	4518	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	-47	-234	-47	234	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGTCAGAGTTTTAACA	3815	False	NA	NA	False	AATAAA	-15	NA	128342266	128297930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.50	chr7	-	4666	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	142.19479596666	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGCTGATCACACCAT	3874	False	NA	NA	False	ATTAAA	-15	NA	128342207	128299910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306423_128306638_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.51	chr7	-	3583	18	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	207.741088525096	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGCTGATCACACCAT	3882	False	NA	NA	False	ATTAAA	-15	NA	128342199	128299910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128320260_128320353_128321292_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.52	chr7	-	2911	18	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	208.115219618072	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGCTGATCACACCA	3882	False	NA	NA	False	ATTAAA	-14	NA	128342199	128299911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128321292_128321329_128321907_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.54	chr7	-	5109	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	142.102623323975	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGCTGATCACACCA	3862	False	NA	NA	False	ATTAAA	-14	NA	128342219	128299911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301605_128301820_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.55	chr7	-	6123	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	139.763228354242	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGCTGATCACACCA	3912	False	NA	NA	False	ATTAAA	-14	NA	128342169	128299911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.56	chr7	-	4536	17	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	181.262402592898	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTGCTGATCACACCA	3868	False	NA	NA	False	ATTAAA	-14	NA	128342213	128299911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317759_128318549_128318630_128320260_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.58	chr7	-	4245	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	141.848683070689	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGCTGATCACACC	3918	False	NA	NA	False	ATTAAA	-13	NA	128342163	128299912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128313497_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.59	chr7	-	2525	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	142.338501077147	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGCTGATCACACC	3917	False	NA	NA	False	ATTAAA	-13	NA	128342164	128299912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326745_128326923_128341856
ES.32057.6	chr7	-	7425	15	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	0	150	intron_retention	TRUE	non_canonical	0	0	junction_4	145.330745233774	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATACGCTGATGTTTT	3862	False	NA	NA	False	ATTAAA	-15	NA	128342219	128298014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128306424_128306638_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.60	chr7	-	4704	16	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	142.19479596666	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGCTGATCACACC	3861	False	NA	NA	False	ATTAAA	-13	NA	128342220	128299912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306490_128306678_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.62	chr7	-	4062	6	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	-2505	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	285.61974721647	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATGTTGCTGATCACA	NA	False	NA	NA	False	ATTAAA	-11	NA	128307066	128299914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300295_128301042_128301605_128301820_128304132_128305218_128305353_128306202_128306490_128306678
ES.32057.63	chr7	-	174	1	Intergenic	novelGene_26246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128301810	128301636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_128301600_128301800
ES.32057.64	chr7	-	2517	14	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	9	-2401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	151.284011286738	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGGTTTTACTGTA	3880	False	NA	NA	False	AATACA	-21	NA	128342201	128303447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325931_128326836_128326923_128341856
ES.32057.65	chr7	-	5562	12	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	2	-2403	intron_retention	FALSE	canonical	3	452	junction_5	47.7685535760065	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTGTGGTTTTACTG	3864	False	NA	NA	False	AATACA	-19	NA	128342217	128303449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.66	chr7	-	2773	8	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	252	12995	252	1849	5prime_fragment	FALSE	canonical	3	440	junction_2	35.2408621822301	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAACAATAATAACACAAA	4123	False	NA	NA	False	AAAAAG	-6	NA	128341958	128312485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.67	chr7	-	2231	6	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	3	-1972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.985821124318	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGACTGCATGCAATAC	3874	False	NA	NA	False	NA	NA	NA	128342207	128316306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128317815_128322287_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32057.7	chr7	-	4194	3	NNC	ENSMUSG00000048170.15	novel	463	2	NA	NA	-1536	145	intron_retention	TRUE	non_canonical	0	0	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCTCATACGCTGAT	NA	False	NA	NA	False	ATTAAA	-10	NA	128302479	128298019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128300746_128300795_128301605_128301820
ES.32057.8	chr7	-	5489	2	NNC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	694	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACAGCATTCAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	128303867	128298164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_128301605_128301818
ES.32057.9	chr7	-	4213	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	0	24	0	-24	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	3862	False	NA	NA	False	NA	NA	NA	128342219	128298188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ES.32058.1	chr7	+	3563	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	-98	1040	-98	-1040	multi-exon	TRUE	canonical	3	121	junction_10	14.275615919341	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTATTTTTATTTAAAT	1833	False	NA	40	True	ATTAAA	-28	NA	128346568	128385520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ES.32058.10	chr7	+	3747	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	47.0565722046806	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTGTCTCTCCCTGT	1951	False	NA	20	True	AATAAA	-32	NA	128346686	128386557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32058.12	chr7	+	3420	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	-1	-1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.1682025292138	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGCAATATGTTATT	1964	False	NA	29	True	ATTAAA	-17	NA	128346699	128385509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369392_128373894_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ES.32058.15	chr7	+	2422	15	NIC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	2	-1050	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	52.3388196352987	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCAATATGTTATTT	1967	False	NA	30	True	ATTAAA	-18	NA	128346702	128385510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_128346903_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ES.32058.18	chr7	+	4345	21	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	52.138853075226	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1971	False	NA	23	True	AATAAA	-35	NA	128346706	128386560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128366082_128366171_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32058.2	chr7	+	4382	20	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	34.6985434804919	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1846	False	NA	23	True	AATAAA	-35	NA	128346581	128386560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32058.21	chr7	+	2887	18	NIC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	7	-1050	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	36.4127625065224	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCAATATGTTATTT	1972	False	NA	30	True	ATTAAA	-18	NA	128346707	128385510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_128346903_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ES.32058.24	chr7	+	5115	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_18	35.5286356424967	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1997	False	NA	23	True	AATAAA	-35	NA	128346732	128386560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32058.25	chr7	+	3216	18	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	3	-1049	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	45.0248681766561	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCAATATGTTATTTT	2026	False	NA	31	True	ATTAAA	-19	NA	128346761	128385511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380789_128380950_128381359_128381462_128385151
ES.32058.26	chr7	+	4573	18	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	6223	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	36.6300120866364	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTCTTTTTAAAGCTG	8631	False	NA	-1	True	AATAAA	-11	NA	128353366	128386536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32058.5	chr7	+	4155	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	46.8648239983365	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1931	False	NA	23	True	AATAAA	-35	NA	128346666	128386560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151_128385885_128386092
ES.32059.1	chr7	-	178	1	Antisense	novelGene_ENSMUSG00000055319.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7556	False	NA	NA	False	NA	NA	NA	128386095	128385917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_128385900_128386100
ES.3206.1	chr10	+	177	1	Intergenic	novelGene_2517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACACACACACACAG	NA	False	NA	NA	False	NA	NA	NA	77796523	77796700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77796500_77796700
ES.32060.1	chr7	-	668	4	Intergenic	novelGene_26248	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGCCCAAACTCAATATT	NA	False	NA	NA	False	NA	NA	NA	129022697	129013510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_129013705_129017273_129017374_129022231_129022397_129022488
ES.32060.2	chr7	-	384	3	Intergenic	novelGene_26249	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGTTTATAATAGCCC	NA	False	NA	NA	False	NA	NA	NA	129021858	129013522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_129013705_129017273_129017374_129021756
ES.32061.1	chr7	+	2152	1	Intergenic	novelGene_26250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAGAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129048421	129050573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_129048400_129050600
ES.32062.1	chr7	+	4732	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-181	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	35.0779561862444	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTGAGTCTCTTC	NA	False	NA	7	True	AATAAA	-20	NA	129193405	129237463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.10	chr7	+	4479	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	53.411773592524	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193637	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129232321_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32062.12	chr7	+	4410	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	52.7292434409465	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193637	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32062.15	chr7	+	4421	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	45.8696489125219	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193649	129237462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.17	chr7	+	5369	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_27	45.9210272178306	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193652	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32062.18	chr7	+	2874	19	ISM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	66	10098	11	0	5prime_fragment	FALSE	canonical	3	127	junction_9	16.4267923275617	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTTGCATGCGT	NA	False	NA	NA	False	AAAACA	-25	NA	129193652	129227364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879
ES.32062.19	chr7	+	4368	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	45.1991478123533	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193652	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.2	chr7	+	4571	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.4929210685238	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTTTGTTGTTTGAGT	NA	False	NA	1	True	AATAAA	-14	NA	129193575	129237457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208225_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.21	chr7	+	5384	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	19	0	intron_retention	FALSE	non_canonical	0	0	junction_16	53.1160646747348	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193660	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129224980_129225032_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.22	chr7	+	4464	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	45.2077263353087	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACTTTGTTGTTTGAG	NA	False	NA	0	True	AATAAA	-13	NA	129193660	129237456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229832_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.24	chr7	+	4426	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	35.2356363442908	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193661	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129236508
ES.32062.25	chr7	+	4383	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.4619570719995	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193661	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226454_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.26	chr7	+	5551	28	ISM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	85	2	30	0	intron_retention	FALSE	canonical	3	124	junction_20	18.4632508614576	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193671	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373
ES.32062.28	chr7	+	4167	27	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	30	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.9748138484303	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTGTTTGAGTCTCT	NA	False	NA	5	True	AATAAA	-18	NA	129193671	129237461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.29	chr7	+	5323	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	31	0	intron_retention	FALSE	non_canonical	0	0	junction_27	35.7020515984753	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193672	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.3	chr7	+	4571	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	35.0779561862444	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193599	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235494_129236543
ES.32062.30	chr7	+	6842	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	37	0	intron_retention	FALSE	non_canonical	0	0	junction_27	35.5831297398788	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193678	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.31	chr7	+	4400	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	45.3328393830633	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193682	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204772_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.32	chr7	+	4547	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	42	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	50.9357713804596	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTGTTTGAGTCTCT	NA	False	NA	5	True	AATAAA	-18	NA	129193683	129237461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232244_129232522_129232897_129232994_129233435_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.33	chr7	+	5561	26	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	52	0	intron_retention	FALSE	non_canonical	0	0	junction_25	46.2756955647346	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193693	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226879_129227052_129229728_129229838_129230717_129231708_129232343_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.34	chr7	+	5138	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	58.9482812542129	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193844	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129224980_129225032_129225974_129226082_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.35	chr7	+	4469	29	NNC	ENSMUSG00000042055.14	novel	3155	25	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	44.8167897428759	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193844	129237462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193965_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.36	chr7	+	5210	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.9985089517992	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193845	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208446_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.38	chr7	+	5198	28	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	206	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	35.4369936826193	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTTGTTTGAGTCT	NA	False	NA	3	True	AATAAA	-16	NA	129193847	129237459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.39	chr7	+	5401	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	206	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	58.0408349389304	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193847	129237462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129214096_129214269_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32062.40	chr7	+	4478	29	NNC	ENSMUSG00000042055.14	novel	3155	25	NA	NA	218	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	52.3032757392998	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129193859	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193965_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32062.42	chr7	+	5648	26	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-3755	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.4948646272788	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129203046	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129217434_129217502_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.43	chr7	+	5245	22	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	51.4074471607253	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129208236	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129217502_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.44	chr7	+	3139	20	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	41.193348574242	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACTTTGTTGTTTGAG	NA	False	NA	0	True	AATAAA	-13	NA	129209483	129237456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.45	chr7	+	10010	16	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	2409	0	intron_retention	FALSE	non_canonical	0	0	junction_15	45.1998033427384	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129211939	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.46	chr7	+	4253	10	NNC	ENSMUSG00000042055.14	novel	2191	11	NA	NA	-1686	0	intron_retention	FALSE	non_canonical	0	0	junction_9	55.9287465562927	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129225093	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.47	chr7	+	3438	10	NNC	ENSMUSG00000042055.14	novel	2191	11	NA	NA	1430	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.0048730860402	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129228209	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.48	chr7	+	6279	4	NIC	ENSMUSG00000042055.14	novel	2191	11	NA	NA	-1345	0	intron_retention	FALSE	canonical	3	124	junction_1	27.5317997958724	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129229411	129237458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_129229838_129230717_129232994_129233431_129233598_129234047
ES.32062.8	chr7	+	4495	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	45.497294716616	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193631	129237462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231651_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235456_129236543
ES.32062.9	chr7	+	4530	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_28	45.0935535462506	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTGTTTGAGTCTC	NA	False	NA	4	True	AATAAA	-17	NA	129193632	129237460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234405_129234580_129235373_129235456_129236543
ES.32063.1	chr7	-	6807	3	Antisense	novelGene_ENSMUSG00000108481.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	129342174	129161345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_129162007_129335973_129341200_129341254
ES.32063.2	chr7	-	6773	3	Antisense	novelGene_ENSMUSG00000108481.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	129342174	129161347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_129165267_129339237_129341185_129341267
ES.32064.1	chr7	+	177	1	Intergenic	novelGene_26251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAGAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	129711859	129712036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_129711900_129712000
ES.32065.1	chr7	-	177	1	Intergenic	novelGene_26252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAATGATAA	NA	False	NA	NA	False	NA	NA	NA	129759803	129759626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_129759600_129759800
ES.32066.1	chr7	+	2040	1	Antisense	novelGene_ENSMUSG00000030849.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-15	NA	129800061	129802101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_129800100_129802100
ES.32067.1	chr7	-	4375	17	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	1	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	4.56720647661128	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129867984	129764182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129863478_129863797_129867523
ES.32067.10	chr7	-	6178	8	ISM	ENSMUSG00000030849.19	ENSMUST00000121064.8	1830	13	74431	-487	-4648	136	intron_retention	FALSE	canonical	2	5	junction_6	3.97953950776689	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGTCTCTCTTTTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	129789156	129765201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370
ES.32067.11	chr7	-	193	1	Intergenic	novelGene_26253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129781974	129781781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_129781800_129782000
ES.32067.12	chr7	-	2649	8	ISM	ENSMUSG00000030849.19	ENSMUST00000122054.8	3323	18	-103	33855	-31	2243	5prime_fragment	FALSE	canonical	0	0	junction_5	5.74278606921194	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTGTGCTGCTGAGA	NA	False	NA	NA	False	AATAAA	-15	NA	129868024	129799293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
ES.32067.2	chr7	-	4498	17	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-22	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	4.83113276054385	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129868015	129764182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765946_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129863478_129863797_129867523
ES.32067.3	chr7	-	4681	18	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	4.98232168890816	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	129868029	129764182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
ES.32067.4	chr7	-	4220	16	NNC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-4	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.53132493671774	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGCAGCTTATTTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	129867979	129764203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800199_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863797_129867523
ES.32067.6	chr7	-	4745	18	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-29	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	5.17647058823529	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGCAGCTTATTTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	129868022	129764203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765946_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
ES.32067.7	chr7	-	4641	18	FSM	ENSMUSG00000030849.19	ENSMUST00000122054.8	3323	18	-91	-1227	-19	30	multi-exon	FALSE	non_canonical	0	0	junction_9	5.16643412059917	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATGTCACGCAGCT	NA	False	NA	NA	False	AATAAA	-33	NA	129868012	129764211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
ES.32067.8	chr7	-	4253	16	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	4	28	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	4.99065793925677	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATAAATGTCACGCAG	NA	False	NA	NA	False	AATAAA	-31	NA	129867971	129764213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863797_129867523
ES.32067.9	chr7	-	3340	16	NIC	ENSMUSG00000030849.19	novel	3323	18	NA	NA	-9	180	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	4.99065793925677	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTAGAGTTTCTTAATT	NA	False	NA	NA	False	AATAGA	-16	NA	129868002	129765157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863797_129867523
ES.32068.1	chr7	+	160	1	Intergenic	novelGene_26254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129991654	129991814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_129991700_129991800
ES.32069.1	chr7	+	4910	1	Intergenic	novelGene_26256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATACA	NA	False	NA	NA	False	NA	NA	NA	130059549	130064459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130059500_130064500
ES.3207.1	chr10	+	3435	5	NIC	ENSMUSG00000020284.17	novel	2238	6	NA	NA	-44	1	intron_retention	FALSE	canonical	3	54	junction_2	1.80277563773199	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTCCCAGGCCCACT	NA	False	NA	15	True	AATAAA	-15	NA	77814443	77821271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ES.3207.2	chr10	+	1728	6	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.657449106199	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCCAGGCCCACTT	NA	False	NA	16	True	AATAAA	-16	NA	77814446	77821272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ES.3207.3	chr10	+	1095	6	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-40	327	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.657449106199	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCTGGGACAGGAAGCA	NA	False	NA	8	True	AATAAA	-21	NA	77814447	77820640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ES.3207.4	chr10	+	1154	7	NNC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-34	326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.2041171147445	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCTGGGACAGGAAGC	NA	False	NA	7	True	AATAAA	-20	NA	77814453	77820639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_77814630_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77819775_77819842_77820252
ES.3207.5	chr10	+	3463	5	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	54	junction_2	1.08972473588517	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTCCCAGGCCC	NA	False	NA	12	True	AATAAA	-12	NA	77814477	77821268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77814616_77815586_77817648_77818703_77818876_77819349_77819426_77820252
ES.3207.6	chr10	+	1082	6	NIC	ENSMUSG00000020284.17	novel	1818	7	NA	NA	-8	360	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	21.8595516879921	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGAGGTTCATGTTGTT	NA	False	NA	41	True	NA	NA	NA	77814479	77820673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77814616_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ES.32070.1	chr7	+	1154	2	Antisense	novelGene_ENSMUSG00000030850.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAACACATGAAAATCTA	NA	False	NA	NA	False	NA	NA	NA	130093426	130110669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_130094381_130110469
ES.32070.2	chr7	+	1079	1	Intergenic	novelGene_26257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACATTTCCCATATTT	NA	False	NA	NA	False	NA	NA	NA	130093426	130094505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130093400_130094500
ES.32071.1	chr7	+	2940	1	Antisense	novelGene_ENSMUSG00000030850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACCAAAGGACGGCAGC	NA	False	NA	NA	False	ATTAAA	-8	NA	130112241	130115181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_130112200_130115200
ES.32072.1	chr7	-	4834	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-145	-4	-95	4	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGGCCGTGGTTCTTGTC	NA	False	NA	-11	True	AATAAA	-20	NA	130121405	129993218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.10	chr7	-	4179	8	NIC	ENSMUSG00000030850.18	novel	4685	12	NA	NA	19	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	89.2019035213752	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATACTAACAAT	NA	False	NA	-38	True	AAAAAG	-4	NA	130121221	129993245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130020177_130020299_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.12	chr7	-	4665	12	NNC	ENSMUSG00000030850.18	novel	4735	12	NA	NA	-6	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	76.7510734304562	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATACTAACAAT	NA	False	NA	-38	True	AAAAAG	-4	NA	130121266	129993245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110992_130112546_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.14	chr7	-	3341	1	NIC	ENSMUSG00000030850.18	novel	4685	12	NA	NA	23934	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATACTAACAAT	NA	False	NA	-38	True	AAAAAG	-4	NA	129996586	129993245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129993200_129996600
ES.32072.15	chr7	-	4657	9	NNC	ENSMUSG00000030850.18	novel	4735	12	NA	NA	-2897	-192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.6589563546468	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGATTCTACTGTGGCT	NA	False	NA	-23	True	AATAAA	-28	NA	130112124	129993414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130111554
ES.32072.16	chr7	-	4509	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-16	192	-16	-192	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGATTCTACTGTGGCT	NA	False	NA	-23	True	AATAAA	-28	NA	130121276	129993414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.17	chr7	-	4375	11	NIC	ENSMUSG00000030850.18	novel	4685	12	NA	NA	-7	-196	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	75.5916000624408	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGTGATTCTACTGT	NA	False	NA	-27	True	AATAAA	-24	NA	130121267	129993418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.18	chr7	-	4522	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	17	196	17	-196	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGTGATTCTACTGT	NA	False	NA	-27	True	AATAAA	-24	NA	130121293	129993418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.19	chr7	-	4223	10	NIC	ENSMUSG00000030850.18	novel	4735	12	NA	NA	-16	-196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.6975743412991	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGTGATTCTACTGT	NA	False	NA	-27	True	AATAAA	-24	NA	130121276	129993418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130020177_130020299_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.2	chr7	-	4710	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	27	-2	-23	2	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCGGCCGTGGTTCTTG	NA	False	NA	-13	True	AATAAA	-18	NA	130121283	129993220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.20	chr7	-	4620	12	FSM	ENSMUSG00000030850.18	ENSMUST00000094017.5	1938	12	187	-2869	187	-196	multi-exon	FALSE	canonical	3	22	junction_11	68.2405807383271	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAAGTGATTCTACTGT	NA	False	NA	-27	True	AATAAA	-24	NA	130121912	129993418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
ES.32072.22	chr7	-	4308	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	31	396	-19	-396	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATTGTTTATGTT	NA	False	NA	NA	False	ATTAAA	-10	NA	130121279	129993618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.23	chr7	-	3203	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-13	1495	-13	1357	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGTTGCCCTCGGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	130121273	129994717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.24	chr7	-	2678	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	-80	2137	-80	715	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCGTAACTCCTGCTTGAT	NA	False	NA	NA	False	AATATA	-22	NA	130121390	129995359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.25	chr7	-	1355	8	ISM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	10845	-283	-1619	70	3prime_fragment	FALSE	canonical	3	144	junction_5	29.6785499398237	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCACAGTTACTGTT	NA	False	NA	NA	False	AATATA	-5	NA	130110846	129996004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736
ES.32072.26	chr7	-	1805	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	-16	2896	-16	-44	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTAGCCCTTTAATTG	NA	False	NA	0	True	TATAAA	-17	NA	130121276	129996118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.27	chr7	-	1805	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	34	2896	-16	-44	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTAGCCCTTTAATTG	NA	False	NA	0	True	TATAAA	-17	NA	130121276	129996118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.28	chr7	-	1722	12	FSM	ENSMUSG00000030850.18	ENSMUST00000094017.5	1938	12	375	-159	-33	-54	multi-exon	FALSE	canonical	3	22	junction_11	68.2405807383271	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTCTATGACCTAGC	NA	False	NA	-10	True	TATAAA	-7	NA	130121724	129996128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
ES.32072.29	chr7	-	3122	1	Intergenic	novelGene_26255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	130008176	130005054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130005100_130008200
ES.32072.3	chr7	-	4950	13	FSM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	-205	-3065	-86	0	multi-exon	FALSE	canonical	3	14	junction_6	69.1801191737112	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121396	129993222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.30	chr7	-	2101	1	FSM	ENSMUSG00000108940.2	ENSMUST00000207954.2	1662	1	-987	548	-987	-548	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTACTTTGTATATG	NA	False	NA	NA	False	AATAAA	-20	NA	130060390	130058289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130058300_130060400
ES.32072.31	chr7	-	3164	6	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	-76	110643	-7	3937	5prime_fragment	FALSE	canonical	3	220	junction_1	25.1761792176653	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACAGTTTTTAGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	130121267	130106930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.32	chr7	-	176	1	Intergenic	novelGene_26258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATCCCAG	NA	False	NA	NA	False	NA	NA	NA	130108187	130108011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130108000_130108200
ES.32072.4	chr7	-	4900	12	FSM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	-305	-3065	103	0	multi-exon	FALSE	canonical	3	22	junction_11	65.693629010445	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121996	129993222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
ES.32072.5	chr7	-	4388	9	NIC	ENSMUSG00000030850.18	novel	4685	12	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.5490125614899	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121278	129993222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130020177_130020299_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.6	chr7	-	5723	2	FSM	ENSMUSG00000030850.18	ENSMUST00000208116.2	735	2	-2136	-2852	-2136	0	multi-exon	FALSE	canonical	3	171	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130022656	129993222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_129996467_130020177
ES.32072.7	chr7	-	4580	11	NIC	ENSMUSG00000030850.18	novel	4735	12	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	78.8137678327841	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTCGGCCGTGGTT	NA	False	NA	-17	True	AATAAA	-14	NA	130121278	129993224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32072.9	chr7	-	4588	11	NIC	ENSMUSG00000030850.18	novel	4735	12	NA	NA	21	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	76.5603683376719	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATACTAACAAT	NA	False	NA	-38	True	AAAAAG	-4	NA	130121219	129993245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ES.32073.1	chr7	+	974	3	NNC	ENSMUSG00000099422.5	novel	1298	4	NA	NA	1107	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAAGCTTAAG	NA	False	NA	NA	False	NA	NA	NA	130128763	130131200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130128890_130128980_130129057_130130428
ES.32074.1	chr7	+	129	1	Intergenic	novelGene_26259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	130133042	130133171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130133000_130133200
ES.32075.1	chr7	-	2428	2	ISM	ENSMUSG00000040331.17	ENSMUST00000159694.3	803	8	37414	-2155	269	911	3prime_fragment	FALSE	canonical	3	1513	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGGATTCAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	130137434	130133344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_130135592_130137253
ES.32075.10	chr7	-	5794	8	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_1	725.91591687147	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149131	130134255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130145155_130147624_130147703_130148721
ES.32075.11	chr7	-	1964	11	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	84	-1	intron_retention	FALSE	canonical	3	18	junction_9	440.438429295174	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGATCGTTTTTATT	NA	False	NA	-8	True	ATTAAA	-21	NA	130149027	130134256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130145155_130147624_130147703_130148721
ES.32075.14	chr7	-	4649	4	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	-846	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	680.439237225159	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGATCGTTTTTATT	NA	False	NA	-8	True	ATTAAA	-21	NA	130142083	130134256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130136707_130138242_130139983_130140740
ES.32075.15	chr7	-	4707	8	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	514.414904408446	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGATCGTTTTTATT	NA	False	NA	-8	True	ATTAAA	-21	NA	130149111	130134256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.16	chr7	-	1295	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	79	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	443.31218119966	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGATCGTTTTTATT	NA	False	NA	-8	True	ATTAAA	-21	NA	130149032	130134256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138748_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.17	chr7	-	2579	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	55	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	596.974840340864	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGATCGTTTTTATT	NA	False	NA	-8	True	ATTAAA	-21	NA	130149056	130134256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130145317_130147221_130147703_130148721
ES.32075.18	chr7	-	2134	10	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1333	junction_1	63.8855071568768	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACGTGATCGTTTTTAT	NA	False	NA	-9	True	ATTAAA	-20	NA	130149109	130134257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.19	chr7	-	3339	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	102	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	680.419106139738	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACGTGATCGTTTTTA	NA	False	NA	-10	True	ATTAAA	-19	NA	130149009	130134258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130145337_130145980_130147703_130148721
ES.32075.2	chr7	-	4672	9	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	33	3	intron_retention	FALSE	non_canonical	0	0	junction_1	654.404500290149	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATCGTTTTTATTGTCT	NA	False	NA	-4	True	ATTAAA	-25	NA	130149078	130134252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130141696_130144409_130145337_130145980_130147703_130148721
ES.32075.20	chr7	-	3294	10	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	197	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	463.873013700416	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACGTGATCGTTTTTA	NA	False	NA	-10	True	ATTAAA	-19	NA	130147487	130134258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130145354_130145970
ES.32075.21	chr7	-	4855	9	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	13	2	intron_retention	FALSE	non_canonical	0	0	junction_1	496.77554036003	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAACGTGATCGTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	130149098	130134260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130144541_130147624_130147703_130148721
ES.32075.22	chr7	-	1336	10	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	617.356011102544	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAACGTGATCGTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	130149074	130134260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130148721
ES.32075.24	chr7	-	2471	10	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	5	2	intron_retention	FALSE	canonical	3	18	junction_8	610.590202232011	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAACGTGATCGTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	130149106	130134260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130145155_130147624_130147703_130148721
ES.32075.25	chr7	-	1354	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	68	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	442.381113973009	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAACGTGATCGTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	130149043	130134260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140748_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.26	chr7	-	3230	9	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	63	2	intron_retention	FALSE	non_canonical	0	0	junction_1	489.640413339218	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACAACGTGATCGTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	130149048	130134260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.27	chr7	-	3917	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	62	1	intron_retention	FALSE	non_canonical	0	0	junction_1	587.886349560865	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCACAACGTGATCGTTT	NA	False	NA	-13	True	ATTAAA	-16	NA	130149049	130134261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130147703_130148721
ES.32075.28	chr7	-	2341	10	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	18	junction_8	600.613390164126	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCACAACGTGATCGTT	NA	False	NA	-14	True	ATTAAA	-15	NA	130149104	130134262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130134423_130135306_130135592_130137253_130137303_130138712_130138808_130139891_130140841_130141543_130141696_130144409_130144541_130145095_130145155_130147624_130147703_130148721
ES.32075.3	chr7	-	1457	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	-21	-1	-21	1	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149132	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.32	chr7	-	1090	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	537	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	587.933916354551	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATAGTCACAACGTGAT	NA	False	NA	-18	True	ATTAAA	-11	NA	130148574	130134266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130135400_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148521
ES.32075.33	chr7	-	1351	1	Intergenic	novelGene_26260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	130143844	130142493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130142500_130143800
ES.32075.4	chr7	-	1537	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	-80	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	447.214769434105	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149191	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.5	chr7	-	1316	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	39	1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_7	429.563685615998	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149072	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141624_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.6	chr7	-	1393	12	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	102	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	558.407875456553	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149009	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130145155_130147624_130147703_130148721
ES.32075.8	chr7	-	1537	10	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	2	1	intron_retention	FALSE	canonical	3	1333	junction_1	63.8855071568768	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149109	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130134423_130135306_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ES.32075.9	chr7	-	3885	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	15	1	intron_retention	FALSE	non_canonical	0	0	junction_1	686.571547619037	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGATCGTTTTTATTGT	NA	False	NA	-6	True	ATTAAA	-23	NA	130149096	130134254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130134423_130135285_130135400_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130145337_130145980_130147703_130148721
ES.32076.1	chr7	-	183	1	Intergenic	novelGene_26261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCTAAAACTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	130153261	130153078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130153100_130153300
ES.32077.1	chr7	+	4329	18	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	-8852	3	intron_retention	FALSE	canonical	0	0	junction_1	102.388499570463	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGCTGTGAGTTATTT	NA	False	NA	33	True	AATAAA	-45	NA	130170315	130366518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130171035_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.10	chr7	+	3606	18	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2504	0	intron_retention	FALSE	canonical	0	0	junction_2	116.690879016634	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130176663	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130203568_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.11	chr7	+	3735	18	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2503	-8	intron_retention	FALSE	canonical	1	4	junction_1	116.205819077804	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAAGTTTTTTCTTTG	NA	False	NA	0	True	AATAAA	-12	NA	130176664	130366485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.12	chr7	+	3659	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2501	-3	intron_retention	FALSE	canonical	1	1	junction_3	125.719951371449	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCGAGTGTGGCTGTGA	NA	False	NA	26	True	AATAAA	-38	NA	130176666	130366511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130191699_130191757_130203566_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.13	chr7	+	3943	20	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2501	-2	intron_retention	FALSE	canonical	1	1	junction_3	122.957934837944	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130176666	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130191699_130191757_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.14	chr7	+	3808	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2490	0	intron_retention	FALSE	canonical	1	1	junction_3	125.917521506033	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130176677	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130191699_130191757_130203566_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.15	chr7	+	3735	18	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2486	0	intron_retention	FALSE	canonical	1	2	junction_4	128.321719392393	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130176681	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.16	chr7	+	3759	1	Intergenic	novelGene_26263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	130184482	130188241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130184500_130188200
ES.32077.17	chr7	+	3693	18	NIC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	117.887753780236	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130198039	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130198150_130203566_130203668_130229127_130229230_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.18	chr7	+	3964	17	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	4931	0	intron_retention	FALSE	canonical	2	5	junction_2	101.953401580085	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130202978	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.19	chr7	+	3967	18	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	5054	0	intron_retention	FALSE	canonical	2	11	junction_2	100.680315611132	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130203101	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.2	chr7	+	3780	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2571	0	intron_retention	FALSE	canonical	2	6	junction_1	113.591114784673	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTCTTTGAGTCTTGG	NA	False	NA	8	True	AATAAA	-20	NA	130176596	130366493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.20	chr7	+	4048	17	NIC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	5082	4	intron_retention	FALSE	canonical	2	11	junction_1	83.3257678857507	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGTGAGTTATTTT	NA	False	NA	34	True	AATAAA	-27	NA	130203129	130366519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.21	chr7	+	3801	17	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	5086	0	intron_retention	FALSE	non_canonical	0	0	junction_4	119.55240417386	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130203133	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130276331_130276470_130318432_130318563_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.22	chr7	+	6245	5	NNC	ENSMUSG00000030852.19	novel	5804	7	NA	NA	5088	18228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.54835134966506	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTCAGTGTTTTATC	NA	False	NA	NA	False	NA	NA	NA	130203135	130246799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130223450_130228572_130229127_130229230_130246204
ES.32077.23	chr7	+	3658	16	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	5094	-4	intron_retention	FALSE	canonical	0	0	junction_2	104.6695541003	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCGAGTGTGGCTGTG	NA	False	NA	25	True	AATAAA	-37	NA	130203141	130366510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.24	chr7	+	9150	20	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	5094	0	intron_retention	FALSE	canonical	2	6	junction_4	121.537632533646	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130203141	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130223450_130228572_130229127_130229230_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.25	chr7	+	3787	17	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	5094	-1	intron_retention	FALSE	canonical	1	2	junction_3	117.837000105018	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGAGTGTGGCTGTGAGT	NA	False	NA	28	True	AATAAA	-40	NA	130203141	130366513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130203462_130203566_130203668_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.26	chr7	+	8522	19	NIC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	5563	-6	intron_retention	FALSE	canonical	2	6	junction_3	121.618508987716	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTAGTCATTGTGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	130203610	130363173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130203668_130223450_130228572_130229127_130229230_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.27	chr7	+	4772	17	NIC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	-19906	0	intron_retention	FALSE	canonical	1	2	junction_1	85.0646812725469	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130227304	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130228572_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.28	chr7	+	1119	1	Intergenic	novelGene_26264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGTCAGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	130245679	130246798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130245700_130246800
ES.32077.29	chr7	+	3654	17	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	192	0	intron_retention	FALSE	canonical	0	0	junction_1	85.4538435355602	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247402	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247551_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.3	chr7	+	9059	22	NNC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	-2549	0	intron_retention	FALSE	canonical	1	1	junction_3	133.367937686391	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130176618	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130191699_130191757_130203566_130203668_130223450_130228572_130229127_130229230_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.30	chr7	+	3964	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-82	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247576	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.31	chr7	+	4153	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-74	71	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCCTCTTTTGCTTA	NA	False	NA	16	True	ATTAAA	-16	NA	130247584	130366586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.32	chr7	+	3882	15	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-67	71	intron_retention	FALSE	canonical	1	5	junction_1	82.3265337741442	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCCTCTTTTGCTTA	NA	False	NA	16	True	ATTAAA	-16	NA	130247591	130366586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.33	chr7	+	3651	17	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	-51	-1	intron_retention	FALSE	canonical	2	4	junction_1	84.676498362887	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGAGTGTGGCTGTGAGT	NA	False	NA	28	True	AATAAA	-40	NA	130247607	130366513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247755_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.34	chr7	+	3794	17	NIC	ENSMUSG00000030852.19	novel	3310	16	NA	NA	-44	0	intron_retention	FALSE	canonical	3	9	junction_16	85.1287398224008	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCATTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	130247614	130363179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.35	chr7	+	3566	16	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	-35	-1	intron_retention	FALSE	canonical	0	0	junction_1	83.5734141671594	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGAGTGTGGCTGTGAGT	NA	False	NA	28	True	AATAAA	-40	NA	130247623	130366513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247812_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.37	chr7	+	5085	14	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-29	0	intron_retention	FALSE	canonical	3	48	junction_1	77.8804272378212	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247629	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361371_130361644_130361766_130365983
ES.32077.38	chr7	+	3497	16	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	-24	-2	intron_retention	FALSE	canonical	1	1	junction_1	83.3553570897249	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130247634	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247755_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.39	chr7	+	3893	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-24	0	intron_retention	FALSE	canonical	1	2	junction_2	86.111142652324	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130247634	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.4	chr7	+	3830	20	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2547	-4	intron_retention	FALSE	canonical	1	1	junction_3	122.76908938116	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCGAGTGTGGCTGTG	NA	False	NA	25	True	AATAAA	-37	NA	130176620	130366510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130191699_130191757_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.41	chr7	+	4150	18	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_11	105.778903712358	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130247654	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.42	chr7	+	3729	18	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	10	-7	intron_retention	FALSE	canonical	0	0	junction_4	118.960666349884	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTTTTCTTTGA	NA	False	NA	1	True	AATAAA	-13	NA	130247668	130366486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247755_130264745_130264872_130276331_130276470_130318432_130318570_130328070_130328237_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.43	chr7	+	4235	18	NNC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_3	116.688684691139	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130247668	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130248161_130264745_130264872_130267106_130267267_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336959_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.44	chr7	+	3617	17	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	13	-7	intron_retention	FALSE	canonical	1	3	junction_1	84.8704665578669	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTTTTCTTTGA	NA	False	NA	1	True	AATAAA	-13	NA	130247671	130366486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247812_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.45	chr7	+	3348	17	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	103.781452310854	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCGAGTGTGGCTGTG	NA	False	NA	25	True	AATAAA	-37	NA	130247671	130366510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130247755_130276331_130276470_130318432_130318570_130330252_130330480_130330589_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.46	chr7	+	8518	15	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	48	junction_1	75.81691158068	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130247682	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.47	chr7	+	3572	16	NIC	ENSMUSG00000030852.19	novel	3310	16	NA	NA	32	-8	intron_retention	FALSE	canonical	1	2	junction_2	105.301387560764	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCTAGTCATTGTGT	NA	False	NA	NA	False	AATAAA	-5	NA	130247690	130363171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.48	chr7	+	3018	11	ISM	ENSMUSG00000030852.19	ENSMUST00000209108.2	3310	16	-223	9347	91	-9347	5prime_fragment	FALSE	canonical	3	48	junction_1	77.5345084462396	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGATGTGTGTCTGAGC	NA	False	NA	NA	False	TTTAAA	-16	NA	130247749	130353832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563
ES.32077.49	chr7	+	4077	18	NNC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	91	0	intron_retention	FALSE	canonical	0	0	junction_3	104.104618659777	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247749	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130248161_130264745_130264872_130267106_130267267_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.5	chr7	+	3904	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2516	0	intron_retention	FALSE	canonical	1	4	junction_1	113.818799571083	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130176651	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.50	chr7	+	3895	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-110	0	intron_retention	FALSE	canonical	3	20	junction_7	85.8092907265874	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247849	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336959_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.51	chr7	+	3532	17	NNC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-103	0	intron_retention	FALSE	canonical	0	0	junction_5	89.5117834421815	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130247856	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331282_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.52	chr7	+	4495	15	ISM	ENSMUSG00000030852.19	ENSMUST00000209108.2	3310	16	-52	7	-39	-7	intron_retention	FALSE	canonical	3	48	junction_1	73.2965739656503	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTCTAGTCATTGTGTG	NA	False	NA	NA	False	AATAAA	-6	NA	130247920	130363172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644
ES.32077.53	chr7	+	2735	18	NNC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	105.068637971191	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGCGAGTGTGGCTGT	NA	False	NA	24	True	AATAAA	-36	NA	130247931	130366509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130330480_130331470_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342572_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.54	chr7	+	3336	16	FSM	ENSMUSG00000030852.19	ENSMUST00000209108.2	3310	16	-32	6	-19	-6	multi-exon	FALSE	canonical	3	9	junction_15	96.4575669515991	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTAGTCATTGTGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	130247940	130363173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.55	chr7	+	3922	17	NNC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	87.6870990724975	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247942	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336480_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.56	chr7	+	3904	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	-10	intron_retention	FALSE	canonical	3	154	junction_1	60.6821958146612	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTGGCAGCGAGTGTG	NA	False	NA	19	True	AATAAA	-31	NA	130247959	130366504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361371_130361644_130361766_130365983
ES.32077.57	chr7	+	3583	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_8	91.8415059884267	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130247964	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.58	chr7	+	4840	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	27	0	intron_retention	FALSE	canonical	3	154	junction_1	61.3795478061617	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130247999	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.59	chr7	+	3597	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	47	-1	intron_retention	FALSE	canonical	3	20	junction_6	97.1271789402374	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGAGTGTGGCTGTGAGT	NA	False	NA	28	True	AATAAA	-40	NA	130248019	130366513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336959_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.6	chr7	+	8996	20	NNC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	-2511	0	intron_retention	FALSE	canonical	1	1	junction_5	131.589157498599	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130176656	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130223450_130228572_130229127_130229230_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.60	chr7	+	4240	2	Intergenic	novelGene_26266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130282091	130291007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130283597_130288272
ES.32077.61	chr7	+	4769	1	Intergenic	novelGene_26267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130286238	130291007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130286200_130291000
ES.32077.62	chr7	+	3723	1	FSM	ENSMUSG00000030852.19	ENSMUST00000208661.2	2248	1	-1449	-26	-1402	26	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGTAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	130292883	130296606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130292900_130296600
ES.32077.63	chr7	+	3876	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-339	-73	-130	72	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTTGCTTAT	NA	False	NA	17	True	ATTAAA	-17	NA	130294155	130366587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.64	chr7	+	3749	15	NNC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	-67	0	intron_retention	FALSE	non_canonical	0	0	junction_11	105.649304352675	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130294218	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360885_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.66	chr7	+	3832	16	NNC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	106.601229928281	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294271	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130294718_130298890_130299035_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.67	chr7	+	3879	14	NIC	ENSMUSG00000030852.19	novel	3940	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	28	junction_1	79.1158988054044	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130294285	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361371_130361644_130361766_130365983
ES.32077.68	chr7	+	3395	15	NIC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	19	-2	intron_retention	FALSE	canonical	3	9	junction_14	101.497687718711	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTCATTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	130294304	130363177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.69	chr7	+	5530	16	NNC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_2	121.436659301144	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130294349	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130294718_130318432_130318570_130327089_130329010_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.7	chr7	+	3871	19	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2508	0	intron_retention	FALSE	canonical	0	0	junction_3	126.218615460989	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130176659	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176870_130179167_130179247_130203566_130203668_130229127_130229230_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.71	chr7	+	3445	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	-9	28	-9	-7	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTTTTCTTTGA	NA	False	NA	1	True	AATAAA	-13	NA	130294485	130366486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.73	chr7	+	3361	16	NIC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	101.491017664947	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130294485	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130294718_130318432_130318570_130330252_130330480_130330589_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.74	chr7	+	3613	15	NIC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_1	83.5193977224355	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130315420	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130315792_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.75	chr7	+	3348	15	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	2805	0	intron_retention	FALSE	canonical	0	0	junction_1	83.5193977224355	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130318211	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130318319_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.76	chr7	+	3373	15	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	2807	0	intron_retention	TRUE	canonical	2	7	junction_1	81.8501929236129	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130318213	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130318346_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.77	chr7	+	3445	15	NNC	ENSMUSG00000030852.19	novel	2934	13	NA	NA	2814	0	intron_retention	FALSE	canonical	2	7	junction_1	105.549412937394	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130318220	130366515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130318346_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336959_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.78	chr7	+	3361	14	ISM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	23816	2	2904	-2	3prime_fragment	FALSE	canonical	3	244	junction_1	32.4111895354149	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130318310	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.79	chr7	+	3063	14	ISM	ENSMUSG00000030852.19	ENSMUST00000209108.2	3310	16	70376	5	2942	-5	3prime_fragment	FALSE	canonical	3	9	junction_13	82.1418890751144	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTAGTCATTGTGTGTG	NA	False	NA	NA	False	AATAAA	-8	NA	130318348	130363174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130362905
ES.32077.8	chr7	+	8956	21	NNC	ENSMUSG00000030852.19	novel	9029	22	NA	NA	-2508	-5	intron_retention	FALSE	canonical	2	6	junction_1	128.291572209557	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGCGAGTGTGGCTGT	NA	False	NA	24	True	AATAAA	-36	NA	130176659	130366509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130203566_130203668_130223450_130228572_130229127_130229230_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.80	chr7	+	3307	14	NNC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	2969	0	intron_retention	FALSE	non_canonical	0	0	junction_10	86.6719312617358	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130318375	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360885_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.81	chr7	+	3134	14	NIC	ENSMUSG00000030852.19	novel	3940	18	NA	NA	-176	-9	intron_retention	FALSE	canonical	0	0	junction_7	114.021901768214	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGCAGCGAGTGTGG	NA	False	NA	20	True	AATAAA	-32	NA	130330303	130366505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.83	chr7	+	4791	6	NIC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	-8551	-1	intron_retention	FALSE	canonical	3	280	junction_3	37.3769982743398	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGAGTGTGGCTGTGAGT	NA	False	NA	28	True	AATAAA	-40	NA	130349520	130366513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130353064_130353563_130353641_130355347_130355392_130360894_130361371_130361644_130361766_130365983
ES.32077.84	chr7	+	4902	4	FSM	ENSMUSG00000030852.19	ENSMUST00000207230.2	3668	4	-1159	-75	-1159	0	multi-exon	FALSE	canonical	3	317	junction_1	22.5141930543577	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130356912	130366514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.85	chr7	+	7144	2	ISM	ENSMUSG00000030852.19	ENSMUST00000207230.2	3668	4	1087	-71	1087	-4	intron_retention	FALSE	canonical	3	317	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCGAGTGTGGCTGTG	NA	False	NA	25	True	AATAAA	-37	NA	130359158	130366510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130361056_130361263
ES.32077.86	chr7	+	1617	3	NIC	ENSMUSG00000030852.19	novel	3668	4	NA	NA	2396	-4	intron_retention	FALSE	canonical	3	317	junction_1	15.5	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCGAGTGTGGCTGTG	NA	False	NA	25	True	AATAAA	-37	NA	130360467	130366510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130361056_130361263_130361766_130365983
ES.32077.87	chr7	+	3016	2	NNC	ENSMUSG00000030852.19	novel	3883	21	NA	NA	5327	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTCTTTGAGTCTTGG	NA	False	NA	8	True	AATAAA	-20	NA	130363398	130366493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130365431_130365509
ES.32077.88	chr7	+	2020	1	Genic_Genomic	ENSMUSG00000030852.19	novel	NA	NA	NA	NA	7784	1360	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAAAATACATCCAG	NA	False	NA	NA	False	NA	NA	NA	130365855	130367875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_130365900_130367900
ES.32077.89	chr7	+	3046	1	FSM	ENSMUSG00000109104.2	ENSMUST00000208365.2	367	1	-2169	-510	-2169	510	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGGCAGGCTCTCGGA	NA	False	NA	NA	False	ATTAAA	-45	NA	130366513	130369559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130366500_130369600
ES.32077.9	chr7	+	3796	20	NNC	ENSMUSG00000030852.19	novel	3906	21	NA	NA	-2505	-2	intron_retention	FALSE	canonical	0	0	junction_3	122.865487334073	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	False	NA	27	True	AATAAA	-39	NA	130176662	130366512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130176713_130179167_130179247_130191699_130191763_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ES.32077.90	chr7	+	2770	1	FSM	ENSMUSG00000109104.2	ENSMUST00000208365.2	367	1	-2019	-384	-2019	384	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTAAACTTGCTTAAT	NA	False	NA	10	True	AATAAA	-16	NA	130366663	130369433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130366700_130369400
ES.32078.1	chr7	-	1974	1	Intergenic	novelGene_26262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTGGCCGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	130173583	130171609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130171600_130173600
ES.32079.1	chr7	-	4792	9	Antisense	novelGene_ENSMUSG00000030852.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.992156741649222	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAATAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	130246318	130213638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_130213777_130220333_130220522_130226396_130226729_130226835_130226951_130227278_130229674_130241797_130242778_130243382_130243707_130245749_130245954_130246202
ES.32079.2	chr7	-	3329	4	Antisense	novelGene_ENSMUSG00000030852.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAGACCTGTGTCCAGT	NA	False	NA	NA	False	AATGAA	-19	NA	130246320	130237061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_130239966_130243603_130243707_130245749_130245954_130246202
ES.3208.1	chr10	+	175	1	Intergenic	novelGene_2518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTC	1440	False	NA	4	True	NA	NA	NA	77839800	77839975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77839800_77840000
ES.32080.1	chr7	-	1933	1	Antisense	novelGene_ENSMUSG00000030852.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGTAACTCAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	130266639	130264706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_130264700_130266600
ES.32081.1	chr7	-	177	1	Intergenic	novelGene_26265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	130280721	130280544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130280500_130280700
ES.32082.1	chr7	-	977	1	Intergenic	novelGene_26268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-27	NA	130332778	130331801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130331800_130332800
ES.32083.1	chr7	+	1821	2	NNC	ENSMUSG00000040298.7	novel	1111	7	NA	NA	2985	-11253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAGAGAAAACTCTCTG	NA	False	NA	NA	False	NA	NA	NA	130378881	130380943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130378924_130379164
ES.32084.1	chr7	+	220	1	Intergenic	novelGene_26269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGTACTTGGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	130404428	130404648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130404400_130404600
ES.32085.1	chr7	+	177	1	Intergenic	novelGene_26270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	130419279	130419456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130419300_130419500
ES.32086.1	chr7	+	159	1	Intergenic	novelGene_26271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	130450693	130450852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130450700_130450900
ES.32087.1	chr7	+	4004	14	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	-5147	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.814799586995	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130462338	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130462740_130463528_130463695_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.10	chr7	+	3797	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-43	183	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467571	130515225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.100	chr7	+	3769	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	302	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7499522718438	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCCAAAAAATAAAAAT	NA	False	NA	-24	True	NA	NA	NA	130467941	130515188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468123_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.101	chr7	+	4150	12	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	757	306	intron_retention	FALSE	canonical	2	4	junction_5	105.914904249349	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAAACCTGCTAATAT	NA	False	NA	NA	False	NA	NA	NA	130468396	130513199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.102	chr7	+	3133	5	NNC	ENSMUSG00000040268.18	novel	2941	5	NA	NA	-4540	5023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	111.469726831997	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	130479541	130501494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130479625_130484059_130484117_130487132_130487179_130493910_130496035_130500671
ES.32087.103	chr7	+	4819	9	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	-4468	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.9571783315236	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130494252	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130495967_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.104	chr7	+	7235	5	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	32686	-5	1605	-5	intron_retention	FALSE	canonical	3	237	junction_3	4.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130500325	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.105	chr7	+	6168	4	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	35270	-6	646	-4	intron_retention	FALSE	canonical	3	237	junction_2	4.92160768674447	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130502909	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.106	chr7	+	3579	5	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	35453	-6	829	-4	3prime_fragment	FALSE	canonical	3	24	junction_4	94.7813272749438	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130503092	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.107	chr7	+	5823	4	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	35791	-182	-544	172	intron_retention	FALSE	canonical	3	237	junction_2	4.92160768674447	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTTCAGATCCTTGA	NA	False	NA	2	True	AATAAA	-10	NA	130503430	130515214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.108	chr7	+	2931	5	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-137	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	113.792299827361	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130506496	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130506665_130507120_130507185_130510065_130510143_130511317_130511466_130512561
ES.32087.109	chr7	+	3356	3	ISM	ENSMUSG00000040268.18	ENSMUST00000126355.2	588	5	-113	-320	-113	320	intron_retention	FALSE	canonical	3	237	junction_1	6	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGACTCCCTTTGAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	130506520	130513213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130506665_130507120_130507185_130510065
ES.32087.11	chr7	+	3923	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-42	179	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	87.3790626621502	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATCCTTGAATTCTTG	NA	False	NA	9	True	AATAAA	-17	NA	130467572	130515221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.110	chr7	+	2842	5	FSM	ENSMUSG00000040268.18	ENSMUST00000126355.2	588	5	-110	-2144	-110	-5	multi-exon	FALSE	canonical	3	18	junction_4	92.3211108035427	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130506523	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.111	chr7	+	2770	4	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	38885	-5	-109	-5	3prime_fragment	FALSE	canonical	3	24	junction_3	103.353761421634	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130506524	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.112	chr7	+	3051	5	ISM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	39064	-153	-84	153	3prime_fragment	FALSE	canonical	3	31	junction_4	86.8849814409832	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130506549	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.113	chr7	+	5253	2	ISM	ENSMUSG00000040268.18	ENSMUST00000126355.2	588	5	270	-2144	-130	-5	intron_retention	FALSE	canonical	3	249	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130506903	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130507185_130510065
ES.32087.114	chr7	+	4737	1	FSM	ENSMUSG00000104914.3	ENSMUST00000198082.3	68	1	-1535	-3134	-1535	3134	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAAACCTGCTAATAT	NA	False	NA	NA	False	NA	NA	NA	130508462	130513199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130508500_130513200
ES.32087.115	chr7	+	2573	3	NNC	ENSMUSG00000040268.18	novel	352	4	NA	NA	3040	18790	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTCCCACTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	130510073	130533832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130510156_130512561_130515036_130533815
ES.32087.116	chr7	+	3649	2	ISM	ENSMUSG00000040268.18	ENSMUST00000135359.2	352	4	3152	-2406	3152	-5	3prime_fragment	FALSE	canonical	3	137	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130510185	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130511359_130512561
ES.32087.117	chr7	+	511	1	ISM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	46139	907	6591	337	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCCGGTTTCCGGTGT	NA	False	NA	NA	False	TATAAA	-17	NA	130513624	130514135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130513600_130514100
ES.32087.12	chr7	+	3701	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-41	-5	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	71.3206764472189	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467573	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.13	chr7	+	3719	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-40	179	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	66.4602037138463	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATCCTTGAATTCTTG	NA	False	NA	9	True	AATAAA	-17	NA	130467574	130515221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.14	chr7	+	3552	12	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-40	-5	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	75.7006937968359	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467574	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.15	chr7	+	5956	11	ISM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-50	-1240	-37	-4	intron_retention	FALSE	canonical	3	88	junction_1	49.3035495679571	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467577	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.16	chr7	+	3317	10	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-34	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	84.1348124539817	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467580	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.17	chr7	+	3605	13	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-34	-5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	70.6286749289708	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467580	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.18	chr7	+	5936	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	-52	-3487	-34	-4	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467580	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.19	chr7	+	3847	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	99.9573873705232	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCACTCACGTCCCCTT	NA	False	NA	12	True	AATAAA	-14	NA	130467582	130515031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.2	chr7	+	3716	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-50	-4	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467435	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.20	chr7	+	3588	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-21	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467593	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.21	chr7	+	3508	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-18	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	72.2696969061659	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467596	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.22	chr7	+	3665	13	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.334690544746	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467599	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130479871_130480026_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.23	chr7	+	3755	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-28	-1426	-15	182	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467599	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.24	chr7	+	3945	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-14	153	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	100.280848224923	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467600	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130492668_130492782_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.25	chr7	+	3857	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-13	179	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	71.3206764472189	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATCCTTGAATTCTTG	NA	False	NA	9	True	AATAAA	-17	NA	130467601	130515221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.26	chr7	+	6104	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	-31	-3676	-13	185	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGAATTCTTGGGGTTT	NA	False	NA	15	True	AATAAA	-23	NA	130467601	130515227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.27	chr7	+	3898	15	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	104.93236402754	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCACTCACGTCCCCTT	NA	False	NA	12	True	AATAAA	-14	NA	130467603	130515031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130497574_130497664_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.28	chr7	+	3594	13	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-11	-5	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	74.0793024775177	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467603	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.29	chr7	+	3526	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-8	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	88.0700322386247	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467606	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.3	chr7	+	3730	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	43	4	43	-4	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467528	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.30	chr7	+	3823	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.15264045558	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTCACGTCCCCTTT	NA	False	NA	13	True	AATAAA	-15	NA	130467615	130515032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493293_130493480_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.31	chr7	+	3673	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-1	179	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	72.2696969061659	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATCCTTGAATTCTTG	NA	False	NA	9	True	AATAAA	-17	NA	130467615	130515221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.32	chr7	+	3693	12	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	178	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	75.7006937968359	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATCCTTGAATTCTT	NA	False	NA	8	True	AATAAA	-16	NA	130467616	130515220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.33	chr7	+	3694	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	87.3790626621502	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467617	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.35	chr7	+	4591	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	-14	-2180	2	-67	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGGAAGAACTGATTTC	NA	False	NA	NA	False	NA	NA	NA	130467618	130513731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.36	chr7	+	3575	11	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	182	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	71.4098032485736	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467618	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.37	chr7	+	3724	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	153	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	93.7179574871089	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467618	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510143_130511317_130511389_130512561
ES.32087.38	chr7	+	3770	15	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.0615175514319	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.39	chr7	+	2569	15	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.93027322096	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGGGAAGAACTGAT	NA	False	NA	NA	False	NA	NA	NA	130467618	130513728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493311_130493480_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.4	chr7	+	3631	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-89	-1241	53	-3	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGTCCCCTTTTATTTGG	NA	False	NA	20	True	AATAAA	-22	NA	130467538	130515039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.40	chr7	+	1696	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	308	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAACCTGCTAATATGA	NA	False	NA	NA	False	NA	NA	NA	130467618	130513201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.41	chr7	+	3486	12	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	98.2573783320836	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.43	chr7	+	4017	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.202850747287	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467618	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130479871_130480026_130484059_130484117_130487132_130487179_130493910_130494325_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.44	chr7	+	3711	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	91.649318781626	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.45	chr7	+	4735	12	ISM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	133	5	2	-5	intron_retention	FALSE	canonical	3	173	junction_1	28.6858158862155	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467618	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317
ES.32087.48	chr7	+	3518	13	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	72.4290840907313	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467618	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502258_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.49	chr7	+	3817	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	92.0313813214221	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467618	130515225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503672_130503753_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.5	chr7	+	4153	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	-94	-1662	53	320	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGACTCCCTTTGAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	130467538	130513213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.50	chr7	+	3452	12	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	82.2720743319143	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467618	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.51	chr7	+	3786	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.8513152013956	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCACGTCCCCTTTTATT	NA	False	NA	17	True	AATAAA	-19	NA	130467619	130515036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498750_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.52	chr7	+	3796	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	3	180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.9342815392409	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467619	130515222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503672_130503753_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.54	chr7	+	2221	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	4	-70	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGGGAAGAACTGAT	NA	False	NA	NA	False	NA	NA	NA	130467620	130513728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.55	chr7	+	3860	15	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.333322670761	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467620	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493311_130493480_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.56	chr7	+	3640	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.344686896404	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCACGTCCCCTTTTATT	NA	False	NA	17	True	AATAAA	-19	NA	130467621	130515036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.57	chr7	+	3624	13	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	86.0136859265237	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467621	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493922_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.58	chr7	+	3893	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-5	182	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	91.649318781626	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467622	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.59	chr7	+	3499	12	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	78.9765107876915	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467622	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.6	chr7	+	3789	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-63	185	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGAATTCTTGGGGTTT	NA	False	NA	15	True	AATAAA	-23	NA	130467551	130515227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.60	chr7	+	4918	12	ISM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	137	-182	-5	182	intron_retention	FALSE	canonical	3	173	junction_1	28.6858158862155	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467622	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317
ES.32087.61	chr7	+	3650	12	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-5	180	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	93.8697884842756	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467622	130515222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.62	chr7	+	1960	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.0053761886914	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAACCTGCTAATATGA	NA	False	NA	NA	False	NA	NA	NA	130467627	130513201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498750_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.63	chr7	+	6140	12	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	153	intron_retention	FALSE	canonical	0	0	junction_5	100.31495855101	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467627	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.64	chr7	+	3715	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	78.0111726328707	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467627	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511534_130512561
ES.32087.65	chr7	+	734	7	NNC	ENSMUSG00000040268.18	novel	2397	11	NA	NA	0	5023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.4373661820082	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	130467627	130501494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130501334
ES.32087.66	chr7	+	3380	11	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	71.4098032485736	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467627	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.67	chr7	+	4895	12	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	177	intron_retention	FALSE	canonical	2	2	junction_11	72.3768832096305	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGATCCTTGAATTCT	NA	False	NA	7	True	AATAAA	-15	NA	130467627	130515219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510143_130511317
ES.32087.68	chr7	+	3676	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	102.261470183171	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467628	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130492668_130492782_130493910_130494009_130499054_130499181_130502246_130502391_130503882_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.69	chr7	+	3666	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	89.0121991506397	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467628	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130496789_130496934_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.7	chr7	+	3554	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	-58	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	66.4602037138463	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467556	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.70	chr7	+	5918	11	NIC	ENSMUSG00000040268.18	novel	2397	11	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_8	76.0329533820698	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467628	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130504007_130506599_130506665_130507120_130507185_130510065
ES.32087.71	chr7	+	3586	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	102.506169535787	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467628	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510143_130511317_130511359_130512561
ES.32087.72	chr7	+	3486	11	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	86.1438332093482	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467628	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.73	chr7	+	6088	11	ISM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	2	-1424	2	180	intron_retention	FALSE	canonical	3	88	junction_1	49.3035495679571	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467629	130515222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.74	chr7	+	1553	11	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	320	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	71.4098032485736	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGACTCCCTTTGAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	130467629	130513213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.75	chr7	+	3817	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	2	178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	98.9740866211212	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATCCTTGAATTCTT	NA	False	NA	8	True	AATAAA	-16	NA	130467629	130515220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130499769_130499853_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.77	chr7	+	3591	11	NNC	ENSMUSG00000040268.18	novel	3321	10	NA	NA	-2	182	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	91.1183845335287	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467637	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.78	chr7	+	6241	12	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	182	intron_retention	FALSE	canonical	2	4	junction_5	98.4507260234553	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGAATTCTTGGGG	NA	False	NA	12	True	AATAAA	-20	NA	130467639	130515224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.79	chr7	+	3504	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	79.879553426115	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCACTCACGTCCCC	NA	False	NA	10	True	AATAAA	-12	NA	130467642	130515029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510143_130511317_130511359_130512561
ES.32087.8	chr7	+	3883	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	75	-181	-54	181	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCTTGAATTCTTGGG	NA	False	NA	11	True	AATAAA	-19	NA	130467560	130515223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.80	chr7	+	3700	13	NIC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	16	153	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	74.0793024775177	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467655	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.81	chr7	+	1691	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	23	312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	80.3009530177292	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCTAATATGACTCC	NA	False	NA	NA	False	NA	NA	NA	130467662	130513205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511299_130511359_130512561
ES.32087.82	chr7	+	3687	14	NNC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	101.410350416502	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467662	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.83	chr7	+	3628	11	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	23	172	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	86.1438332093482	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTTCAGATCCTTGA	NA	False	NA	2	True	AATAAA	-10	NA	130467662	130515214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.84	chr7	+	3520	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	93.7179574871089	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467662	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510143_130511317_130511389_130512561
ES.32087.85	chr7	+	3583	14	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	92.0313813214221	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCCCCTTTTATTTG	NA	False	NA	19	True	AATAAA	-21	NA	130467665	130515038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503672_130503753_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.86	chr7	+	3870	9	ISM	ENSMUSG00000040268.18	ENSMUST00000048180.12	3321	10	30	1827	30	312	intron_retention	FALSE	canonical	3	17	junction_3	76.1232553166245	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCTAATATGACTCC	NA	False	NA	NA	False	NA	NA	NA	130467669	130513205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130467714_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.87	chr7	+	3490	12	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	93.9122150320788	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467694	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.88	chr7	+	4347	15	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	111.401759594794	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTCACGTCCCCTTT	NA	False	NA	13	True	AATAAA	-15	NA	130467851	130515032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130494247_130494325_130498493_130498655_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.89	chr7	+	4212	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	219	177	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	84.2151263135074	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGATCCTTGAATTCT	NA	False	NA	7	True	AATAAA	-15	NA	130467858	130515219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
ES.32087.9	chr7	+	3823	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	-50	180	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	78.0035611722667	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467564	130515222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.90	chr7	+	4295	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	219	183	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	81.8696457112701	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467858	130515225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32087.91	chr7	+	5200	12	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	220	3	intron_retention	FALSE	canonical	3	24	junction_1	65.6897289982823	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467859	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317
ES.32087.92	chr7	+	4116	12	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	220	153	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	86.6474761546286	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467859	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ES.32087.93	chr7	+	4174	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	227	177	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	67.0066331708204	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGATCCTTGAATTCT	NA	False	NA	7	True	AATAAA	-15	NA	130467866	130515219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.94	chr7	+	4086	12	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	229	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	102.59661844185	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAATTTTA	NA	False	NA	-17	True	NA	NA	NA	130467868	130515195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502244_130502391_130503906_130503976_130506599_130506665_130510065_130510156_130511317_130511359_130512561
ES.32087.95	chr7	+	6780	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	230	180	intron_retention	FALSE	canonical	0	0	junction_8	119.212782452219	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTTGAATTCTTGG	NA	False	NA	10	True	AATAAA	-18	NA	130467869	130515222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130498493_130498655_130499054_130499181_130502246_130502391_130503672_130503753_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.96	chr7	+	4378	9	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	230	312	intron_retention	FALSE	canonical	3	17	junction_3	97.6049915475638	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGCTAATATGACTCC	NA	False	NA	NA	False	NA	NA	NA	130467869	130513205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ES.32087.97	chr7	+	3997	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	251	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	87.3975590810941	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCACTCACGTCCCCTT	NA	False	NA	12	True	AATAAA	-14	NA	130467890	130515031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
ES.32087.98	chr7	+	3957	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	262	-5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	67.0066331708204	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	False	NA	18	True	AATAAA	-20	NA	130467901	130515037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ES.32087.99	chr7	+	4048	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	276	3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	81.8696457112701	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCACGTCCCCTTTTAT	NA	False	NA	16	True	AATAAA	-18	NA	130467915	130515035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ES.32088.1	chr7	-	175	1	Intergenic	novelGene_26272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5207	False	NA	NA	False	NA	NA	NA	130475233	130475058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130475100_130475200
ES.32089.1	chr7	-	159	1	Intergenic	novelGene_26273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130503370	130503211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130503200_130503400
ES.3209.1	chr10	-	6288	3	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	20869	-4697	3238	4697	3prime_fragment	FALSE	canonical	3	1163	junction_2	26	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATCCCATGGAG	2322	False	NA	NA	False	NA	NA	NA	77824772	77818083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_77824192_77824508_77824615_77824698
ES.3209.10	chr10	-	3854	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-31	-947	intron_retention	FALSE	canonical	3	1016	junction_14	79.2572394169769	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAACATGACCAGAGGAG	NA	False	NA	-18	True	AATAAA	-27	NA	77845601	77823727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.11	chr10	-	4783	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	2347	-950	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	264.093922686608	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGACAACATGACCAGAG	NA	False	NA	-21	True	AATAAA	-24	NA	77843214	77823730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832593_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274
ES.3209.13	chr10	-	2690	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-9	-951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	258.247416039651	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGGACAACATGACCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	77845579	77823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827911_77828242_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.15	chr10	-	3818	7	ISM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	16323	951	-1308	-951	intron_retention	FALSE	canonical	3	1106	junction_6	66.657499369705	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGGACAACATGACCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	77829318	77823731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505
ES.3209.18	chr10	-	3364	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	11	-956	intron_retention	FALSE	canonical	3	1016	junction_14	79.0604041224177	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	NA	False	NA	-27	True	AATAAA	-18	NA	77845630	77823736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.2	chr10	-	3838	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	16	-124	16	124	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTACAGTTTCAGAGGTTT	NA	False	NA	NA	False	NA	NA	NA	77845625	77822656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.20	chr10	-	2758	21	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	30	-956	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	355.523051292036	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	NA	False	NA	-27	True	AATAAA	-18	NA	77845611	77823736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829368_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77845432
ES.3209.21	chr10	-	3068	22	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-19	-956	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	259.122328162551	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	NA	False	NA	-27	True	AATAAA	-18	NA	77845589	77823736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832593_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.22	chr10	-	3597	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-20	-957	intron_retention	FALSE	canonical	2	4	junction_13	265.103352487289	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCACTGGGACAACATG	NA	False	NA	-28	True	AATAAA	-17	NA	77845590	77823737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832593_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.24	chr10	-	3272	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	30	-957	intron_retention	FALSE	canonical	3	1016	junction_14	85.1988262829952	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCACTGGGACAACATG	NA	False	NA	-28	True	AATAAA	-17	NA	77845611	77823737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.25	chr10	-	2586	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-10	-957	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	266.813506966945	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCACTGGGACAACATG	NA	False	NA	-28	True	AATAAA	-17	NA	77845580	77823737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.28	chr10	-	2673	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-12	-959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	348.568136856693	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTCACTGGGACAACA	NA	False	NA	-30	True	AATAAA	-15	NA	77845582	77823739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827911_77828242_77828361_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.3	chr10	-	3681	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	49	0	-22	0	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTCGCCAGACTGGCT	NA	False	NA	NA	False	NA	NA	NA	77845592	77822780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.37	chr10	-	2696	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-3	-960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.479804045484	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGTCACTGGGACAAC	NA	False	NA	-31	True	AATAAA	-14	NA	77845573	77823740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824514_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.38	chr10	-	2687	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-9	-960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	260.165079287605	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGTCACTGGGACAAC	NA	False	NA	-31	True	AATAAA	-14	NA	77845579	77823740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826638_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.40	chr10	-	2642	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-5	-960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	351.295103058819	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGGTCACTGGGACAAC	NA	False	NA	-31	True	AATAAA	-14	NA	77845575	77823740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831199_77832153_77832190_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.43	chr10	-	2698	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-9	-963	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	260.253286708603	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCATGGTCACTGGGAC	NA	False	NA	-34	True	AATAAA	-11	NA	77845579	77823743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837850_77837922_77841274_77841349_77845432
ES.3209.46	chr10	-	2807	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-24	-964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	260.613039701748	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCATGGTCACTGGGA	NA	False	NA	-35	True	AATAAA	-10	NA	77845594	77823744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829368_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.47	chr10	-	2714	22	NNC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	30	-974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	259.142962146248	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACCTGTCTAGAGCATG	NA	False	NA	-45	True	NA	NA	NA	77845611	77823754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845444
ES.3209.5	chr10	-	3393	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	19	318	19	-318	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTTCTCCGTGTAT	NA	False	NA	NA	False	NA	NA	NA	77845622	77823098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.6	chr10	-	2869	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	30	831	30	-831	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAGAGGTCATCAGATC	NA	False	NA	53	True	NA	NA	NA	77845611	77823611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.3209.9	chr10	-	3608	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	-819	941	-543	-941	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGACCAGAGGAGTCCAGG	NA	False	NA	-12	True	AATAAA	-33	NA	77846460	77823721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ES.32090.2	chr7	+	2096	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	-56	1	36	-1	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCGTGCTTCTTTTA	6566	False	NA	18	True	ATTAAA	-19	NA	130537876	130587389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
ES.32090.3	chr7	+	2059	9	NNC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	-15	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.7860918130523	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTAGATTTTGGCGTGC	6607	False	NA	10	True	ATTAAA	-11	NA	130537917	130587381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583954_130584025_130585389_130585486_130586692
ES.32090.4	chr7	+	3406	8	NIC	ENSMUSG00000006205.14	novel	2041	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	73	junction_3	15.4998354171644	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGCGTGCTTCTTT	6619	False	NA	16	True	ATTAAA	-17	NA	130537929	130587387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130585486_130586692
ES.32090.5	chr7	+	174	1	Intergenic	novelGene_26275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTATTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	130566038	130566212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_130566000_130566200
ES.32091.1	chr7	-	174	1	Intergenic	novelGene_26274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	130547464	130547290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_130547300_130547500
ES.32092.1	chr7	+	1191	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	-25	-31	-25	31	multi-exon	FALSE	canonical	3	133	junction_2	32.2713495224479	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTCTAGACTAATACT	NA	False	NA	53	True	GATAAA	-15	NA	130972844	130989599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ES.32092.10	chr7	+	5198	4	NNC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	42	0	intron_retention	TRUE	non_canonical	0	0	junction_2	84.5629285732755	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972937	130989568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130973119_130975264_130976839_130983101_130986323_130989346
ES.32092.11	chr7	+	4047	1	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	-202	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGTCTGATTTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	130985514	130989561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130985500_130989600
ES.32092.12	chr7	+	10195	1	FSM	ENSMUSG00000063179.14	ENSMUST00000208084.2	5294	1	-4891	-10	41	10	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGAGATTCTTCA	NA	False	NA	NA	False	NA	NA	NA	130986026	130996221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130986000_130996200
ES.32092.2	chr7	+	3520	4	FSM	ENSMUSG00000063179.14	ENSMUST00000124672.8	1615	4	-1899	-6	-5	0	multi-exon	FALSE	canonical	3	189	junction_2	16.6799946709291	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972864	130989568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130975993_130985653_130985730_130986228_130986323_130989346
ES.32092.3	chr7	+	686	1	FSM	ENSMUSG00000063179.14	ENSMUST00000207419.2	675	1	-14	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AAGAAA	-7	NA	130972870	130973556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130972900_130973600
ES.32092.4	chr7	+	820	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCTGATTTGGATA	NA	False	NA	17	True	ATTAAA	-17	NA	130972884	130989563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ES.32092.5	chr7	+	3544	4	FSM	ENSMUSG00000063179.14	ENSMUST00000207489.2	581	4	-2965	2	0	-2	multi-exon	FALSE	canonical	3	11	junction_3	94.1535389079396	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTTGTTTATACTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	130972885	130994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_130975993_130985653_130985730_130986228_130986323_130994228
ES.32092.6	chr7	+	771	4	NNC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.344550374681	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGTCTGATTTGGA	NA	False	NA	15	True	ATTAAA	-15	NA	130972885	130989561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_130973119_130975264_130975560_130975793_130975904_130989428
ES.32092.7	chr7	+	4137	5	ISM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	17	5	1	1	intron_retention	FALSE	canonical	3	133	junction_2	35.1452343853331	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCTGATTTGGATA	NA	False	NA	17	True	ATTAAA	-17	NA	130972886	130989563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228
ES.32092.8	chr7	+	3305	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	11	junction_4	81.6394512475433	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGTTTATACTTACAA	NA	False	NA	NA	False	AATAAA	-21	NA	130972892	130994497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130994228
ES.32092.9	chr7	+	826	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	33	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	87.3480824059693	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTTGTTTATACTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	130972928	130994495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130994228
ES.32093.1	chr7	-	6719	7	NNC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	1	62	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1834128577651	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGATAAAAATATTT	NA	False	NA	NA	False	AATAAA	-43	NA	130964438	130939886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130943663_130943728_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.10	chr7	-	1897	7	NNC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	-196	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.1834128577651	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAATAAGATATTTGG	NA	False	NA	NA	False	AATATA	-17	NA	130964684	130944922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236_130964456_130964553
ES.32093.11	chr7	-	1672	5	NIC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	5	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	36.9932426261878	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAATAAGATATTTGG	NA	False	NA	NA	False	AATATA	-17	NA	130964434	130944922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130945534_130952379_130952832_130959188_130959396_130963461_130963666_130964236
ES.32093.12	chr7	-	1395	6	NIC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	33.5463857963865	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGTTGTGAAAATCGA	NA	False	NA	NA	False	NA	NA	NA	130964405	130945239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963662_130964236
ES.32093.14	chr7	-	5834	4	NIC	ENSMUSG00000040177.11	novel	3703	6	NA	NA	-1	-2359	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	39.6063967897443	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACATAAGTATAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	130964426	130947598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130952832_130959188_130959396_130963461_130963666_130964236
ES.32093.16	chr7	-	3573	5	ISM	ENSMUSG00000040177.11	ENSMUST00000208526.2	3703	6	-1	5018	-1	2725	5prime_fragment	FALSE	canonical	3	85	junction_4	3.96074487943871	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTGTGAGAACTGCT	NA	False	NA	NA	False	NA	NA	NA	130964426	130949932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.17	chr7	-	1772	1	NIC	ENSMUSG00000040177.11	novel	3703	6	NA	NA	5491	2449	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGAACACACAGCTTA	NA	False	NA	NA	False	NA	NA	NA	130951980	130950208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130950200_130952000
ES.32093.18	chr7	-	1954	5	ISM	ENSMUSG00000040177.11	ENSMUST00000208526.2	3703	6	-7	6643	-7	1100	5prime_fragment	FALSE	canonical	3	85	junction_4	3.96074487943871	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCAGCACTTATATTAG	NA	False	NA	NA	False	NA	NA	NA	130964432	130951557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.19	chr7	-	3525	1	Genic_Genomic	ENSMUSG00000040177.11	novel	NA	NA	NA	NA	-1672	-2961	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCATAGAAGGATGATG	NA	False	NA	NA	False	NA	NA	NA	130959143	130955618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_130955600_130959100
ES.32093.2	chr7	-	4772	1	Genic_Genomic	ENSMUSG00000040177.11	novel	NA	NA	NA	NA	12752	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGTTTTCAGTAATAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	130944719	130939947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_130939900_130944700
ES.32093.20	chr7	-	4877	3	NNC	ENSMUSG00000040177.11	novel	353	2	NA	NA	5	-2995	intron_retention	TRUE	non_canonical	0	0	junction_1	42.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	130964434	130955652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130957695_130961028_130963666_130964236
ES.32093.21	chr7	-	7554	4	FSM	ENSMUSG00000040167.17_ENSMUSG00000108883.2	ENSMUST00000046306.15	4430	4	22	-3146	-2	7	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGCGTTTCTGAAGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	131012228	130987234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ES.32093.22	chr7	-	4431	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	3	-4	3	4	multi-exon	FALSE	canonical	3	63	junction_1	6.97614984548545	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTTTTAAACT	NA	False	NA	2	True	AATAAA	-21	NA	131012247	130990376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ES.32093.23	chr7	-	3965	4	FSM	ENSMUSG00000040167.17	ENSMUST00000121033.8	2231	4	-16	-1718	8	2	multi-exon	FALSE	canonical	2	3	junction_1	34.7658836600865	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTTTTTTTTAAA	NA	False	NA	0	True	AATAAA	-19	NA	131012242	130990378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130993851_130995483_130995667_130998397_130998581_131012115
ES.32093.25	chr7	-	5584	3	NIC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	-2	2	intron_retention	FALSE	canonical	3	73	junction_1	3.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTTTTTTTTTAAA	NA	False	NA	0	True	AATAAA	-19	NA	131012228	130990378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130995667_130998397_130998581_131012115
ES.32093.26	chr7	-	3892	4	NNC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1754981536767	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	-2	True	AATAAA	-17	NA	131012228	130990380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130993794_130995483_130995667_130998397_130998581_131012115
ES.32093.27	chr7	-	4296	4	NNC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1754981536767	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	-2	True	AATAAA	-17	NA	131012243	130990380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130994183_130995483_130995667_130998397_130998581_131012115
ES.32093.28	chr7	-	4552	5	NIC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2189704837462	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-15	NA	131012226	130990382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130994310_130995483_130995667_130998397_130998581_131010659_131010808_131012115
ES.32093.29	chr7	-	4291	5	NNC	ENSMUSG00000040167.17	novel	4430	4	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.7568890164008	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-15	NA	131012230	130990382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130993469_130993585_130994310_130995483_130995667_130998397_130998581_131012115
ES.32093.3	chr7	-	6670	6	NNC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.8140163965027	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGTTTTCAGTAATAAA	NA	False	NA	NA	False	AATAAA	-15	NA	130964504	130939948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130943656_130943721_130945534_130952379_130952832_130959188_130959416_130963461_130963666_130964236
ES.32093.31	chr7	-	5472	4	FSM	ENSMUSG00000040167.17	ENSMUST00000128432.3	714	4	-18	-4740	8	-3	multi-exon	FALSE	canonical	0	0	junction_1	36.1754981536767	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTTTTGTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	131012242	130990383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130995363_130995483_130995667_130998397_130998581_131012115
ES.32093.32	chr7	-	2705	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	17	1708	-7	8	multi-exon	FALSE	canonical	3	63	junction_1	6.97614984548545	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTACCTTGCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	131012233	130992088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ES.32093.33	chr7	-	2176	4	NNC	ENSMUSG00000040167.17	novel	2231	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1754981536767	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTTTCTGTGTACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	131012226	130992094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130993794_130995483_130995667_130998397_130998581_131012115
ES.32093.4	chr7	-	4354	8	Fusion	ENSMUSG00000040167.17_ENSMUSG00000040177.11	novel	6773	6	NA	NA	0	2322	multi-exon	FALSE	canonical	1	1	junction_5	30.1682357618007	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCGGCAGAGAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	131012226	130942592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130995483_130995667_130998397_130998581_131012115
ES.32093.5	chr7	-	3839	7	NNC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	24	2185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1834128577651	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGGAACTTGGAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	130964401	130942729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_130943663_130943728_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.6	chr7	-	3319	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	45	3409	-4	1557	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGTTCATATGGAACTAA	NA	False	NA	NA	False	AATAAA	-22	NA	130964443	130943357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.7	chr7	-	2235	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	45	4493	-4	473	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTACGTTGTTTCTTCTT	NA	False	NA	-2	True	AATAGA	-18	NA	130964443	130944441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32093.8	chr7	-	2157	5	NIC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	-4	468	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	36.9932426261878	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGATTACGTTGTTTC	NA	False	NA	-7	True	AATAGA	-13	NA	130964443	130944446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130945534_130952379_130952832_130959188_130959396_130963461_130963666_130964236
ES.32093.9	chr7	-	8583	5	NIC	ENSMUSG00000040177.11	novel	3703	6	NA	NA	4	-3	intron_retention	FALSE	canonical	3	85	junction_4	3.96074487943871	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAGATATTTGGTTTTT	NA	False	NA	NA	False	AATATA	-22	NA	130964421	130944917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ES.32094.1	chr7	+	3380	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	2	2699	2	36	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTGTCTTTATTTCAG	NA	False	NA	57	True	TTTAAA	-3	NA	131012331	131047974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.10	chr7	+	3302	11	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	47	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.78493050123	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCATCTTGGAGAATTCT	NA	False	NA	10	True	AATAAA	-14	NA	131012376	131047927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026186_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.11	chr7	+	3348	11	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	49	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.2322934461627	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATTCTCCCTTTTTA	NA	False	NA	19	True	AATAAA	-23	NA	131012378	131047936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045145_131045298_131045964
ES.32094.12	chr7	+	1554	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	53	4474	-49	-293	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCTTCTGAACGCATAT	NA	False	NA	NA	False	NA	NA	NA	131012382	131046199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.13	chr7	+	750	4	FSM	ENSMUSG00000030861.16	ENSMUST00000133277.4	632	4	-118	0	-46	0	multi-exon	FALSE	canonical	3	144	junction_1	11.0453610171873	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACACTCTACTTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	131012385	131030515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157
ES.32094.14	chr7	+	4958	10	NNC	ENSMUSG00000030861.16	novel	2466	10	NA	NA	-40	-8	intron_retention	FALSE	canonical	0	0	junction_8	47.3312466937038	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTGGAGAATTCTCCC	NA	False	NA	13	True	AATAAA	-17	NA	131012391	131047930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131040235_131042930_131043069_131045197
ES.32094.15	chr7	+	3769	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	63	2249	-39	486	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAAGGTGTCCATTCA	NA	False	NA	NA	False	NA	NA	NA	131012392	131048424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.16	chr7	+	2617	7	NIC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	-23	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.8114285342639	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCATCTTGGAGAATTCT	NA	False	NA	10	True	AATAAA	-14	NA	131012408	131047927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131012517_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.17	chr7	+	3045	10	NIC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	-20	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.2746757591769	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCATCTTGGAGAATTC	NA	False	NA	9	True	AATAAA	-13	NA	131012411	131047926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131012517_131026200_131026361_131027503_131027605_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.2	chr7	+	3982	10	FSM	ENSMUSG00000030861.16	ENSMUST00000117518.2	2466	10	-75	-1441	27	-5	multi-exon	FALSE	canonical	3	100	junction_4	20.6618871414717	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAGAATTCTCCCTTT	NA	False	NA	16	True	AATAAA	-20	NA	131012356	131047933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197
ES.32094.3	chr7	+	4182	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	30	1869	30	866	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGGTGGCACAGG	NA	False	NA	NA	False	NA	NA	NA	131012359	131048804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.4	chr7	+	3254	12	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	36	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	43.2052567967838	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTGGAGAATTCTCC	NA	False	NA	12	True	AATAAA	-16	NA	131012365	131047929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965_131047687_131047733
ES.32094.5	chr7	+	1825	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	36	4220	36	-39	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATCTAGAATCTTAGT	NA	False	NA	NA	False	GATAAA	-10	NA	131012365	131046453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.6	chr7	+	3905	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	37	2139	37	596	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTCTTGATTTTATTT	NA	False	NA	NA	False	AATACA	-18	NA	131012366	131048534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.7	chr7	+	3911	11	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	42	593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.78493050123	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCACTCTTGATTTTA	NA	False	NA	NA	False	AATACA	-15	NA	131012371	131048531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026186_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ES.32094.8	chr7	+	3629	11	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.1442133611828	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAGAATTCTCCCTTT	NA	False	NA	16	True	AATAAA	-20	NA	131012374	131047933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045632
ES.32094.9	chr7	+	3285	11	NNC	ENSMUSG00000030861.16	novel	6081	11	NA	NA	45	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.2729499811974	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTGGAGAATTCTCC	NA	False	NA	12	True	AATAAA	-16	NA	131012374	131047929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039137_131039221_131042930_131043069_131045197_131045298_131045965
ES.32095.1	chr7	+	1433	8	Fusion	ENSMUSG00000050100.15_ENSMUSG00000066979.7	novel	3414	6	NA	NA	2712	9	multi-exon	FALSE	canonical	1	46	junction_1	469.934037924473	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131158501	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_131158669_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.10	chr7	+	6970	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	158	-4910	0	4907	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGGCTGGTAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	131162108	131178531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.11	chr7	+	2083	8	NNC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	484.269911246585	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGGTGTGTTACCTT	NA	False	NA	9	True	ATTAAA	-18	NA	131162108	131173622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172585
ES.32095.12	chr7	+	5225	6	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	9	intron_retention	FALSE	canonical	3	1325	junction_5	59.7842788699504	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162108	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131165215_131167921_131168081_131169912_131170091_131170233
ES.32095.13	chr7	+	4284	8	ISM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	1	0	-1	intron_retention	FALSE	canonical	3	44	junction_4	601.965318683692	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGGTGTGTTACCTTG	NA	False	NA	10	True	ATTAAA	-19	NA	131162108	131173623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ES.32095.14	chr7	+	8117	6	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	1	25	intron_retention	FALSE	canonical	3	44	junction_4	640.429855643848	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTTGGTAGTGTCA	NA	False	NA	41	True	AATAAA	-36	NA	131162109	131172918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131170091_131170233
ES.32095.15	chr7	+	1405	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	1	722	1	9	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162109	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.16	chr7	+	4064	7	NIC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	1	26	intron_retention	FALSE	canonical	3	1325	junction_5	32.3367695768558	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGGTAGTGTCAT	NA	False	NA	42	True	AATAAA	-37	NA	131162109	131172919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.17	chr7	+	3137	8	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	1	6	intron_retention	FALSE	canonical	0	0	junction_4	614.157029710527	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTTGGGTGTTTGT	NA	False	NA	22	True	AATAAA	-17	NA	131162109	131172899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131165215_131165361_131165435_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.18	chr7	+	2125	9	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	590.428657841064	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162119	131173624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131165361_131165435_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.19	chr7	+	4759	7	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1325	junction_5	32.3367695768558	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162119	131173624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.2	chr7	+	1401	8	NNC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	-78	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	485.934697888765	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131161872	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131162008_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.20	chr7	+	6395	5	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	1	9	intron_retention	FALSE	canonical	3	1325	junction_3	37.6463809681621	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162120	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.21	chr7	+	1911	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	170	137	1	-137	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTGGTATAGAGAGCT	NA	False	NA	NA	False	ATTAAA	-21	NA	131162120	131173484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.22	chr7	+	4101	8	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	1	9	intron_retention	FALSE	canonical	3	44	junction_4	593.852417590053	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162120	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.23	chr7	+	9750	4	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	1	7	intron_retention	FALSE	canonical	3	1325	junction_3	25.0377492776186	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTTGGGTGTTTGTA	NA	False	NA	23	True	AATAAA	-18	NA	131162120	131172900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131170091_131170233
ES.32095.24	chr7	+	3055	7	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	2	9	intron_retention	FALSE	canonical	3	1325	junction_5	56.3086731034098	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162121	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.25	chr7	+	1544	8	NIC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	3	6	intron_retention	FALSE	canonical	0	0	junction_4	478.238562277217	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTTGGGTGTTTGT	NA	False	NA	22	True	AATAAA	-17	NA	131162122	131172899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165435_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.26	chr7	+	5766	6	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	3	14	intron_retention	FALSE	canonical	3	1325	junction_4	34.0411515668903	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTGTTTGTAAACATTT	NA	False	NA	30	True	AATAAA	-25	NA	131162122	131172907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.27	chr7	+	1400	9	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	590.428657841064	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162122	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131165361_131165435_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.28	chr7	+	3548	8	ISM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	14	723	3	8	intron_retention	FALSE	canonical	3	44	junction_4	601.965318683692	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTGGGTGTTTGTAA	NA	False	NA	24	True	AATAAA	-19	NA	131162122	131172901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ES.32095.29	chr7	+	8542	4	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	-5	9	intron_retention	FALSE	canonical	3	1325	junction_3	28.2960539062723	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162130	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131168081_131169912_131170091_131170233
ES.32095.3	chr7	+	1316	8	NNC	ENSMUSG00000066979.7	novel	3414	6	NA	NA	-76	9	at_least_one_novel_splicesite	FALSE	canonical	1	45	junction_1	470.281808697548	400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131161874	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131161925_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.31	chr7	+	4797	8	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	44	junction_4	593.852417590053	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCCAGGTGTGTTACC	NA	False	NA	7	True	ATTAAA	-16	NA	131162142	131173620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.32	chr7	+	8421	5	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	12	906	intron_retention	FALSE	canonical	3	44	junction_2	661.468961856866	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTACCCTCTTCTGTGATG	NA	False	NA	NA	False	TATAAA	-20	NA	131162147	131174530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_131163336_131164026_131164092_131165062_131170091_131170233_131170451_131172607
ES.32095.33	chr7	+	2099	8	NNC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	479.67280514951	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTGTTACCTTGGTAT	NA	False	NA	14	True	ATTAAA	-23	NA	131162156	131173627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131162265_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.34	chr7	+	2630	8	NNC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	13	558	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	479.67280514951	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAACAACAAAAAAAG	NA	False	NA	NA	False	AGTAAA	-34	NA	131162180	131174182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131162265_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.35	chr7	+	1894	7	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	434	145	47	-145	3prime_fragment	FALSE	canonical	3	1325	junction_5	56.2840020688729	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTTTGAAGTGGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	131162384	131173476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.37	chr7	+	7926	4	ISM	ENSMUSG00000066979.7	ENSMUST00000209131.2	4015	6	4338	-4910	4035	4907	3prime_fragment	FALSE	canonical	3	1325	junction_2	40.5490101262931	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGGCTGGTAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	131166473	131178531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.38	chr7	+	2521	4	ISM	ENSMUSG00000066979.7	ENSMUST00000209131.2	4015	6	5855	-1022	5552	1019	3prime_fragment	FALSE	canonical	3	1325	junction_2	40.5490101262931	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACACAAAATAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	131167990	131174643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.39	chr7	+	1242	3	ISM	ENSMUSG00000066979.7	ENSMUST00000209131.2	4015	6	7225	719	6922	9	3prime_fragment	FALSE	canonical	3	1325	junction_1	43.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131169360	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131170091_131170233_131170451_131172607
ES.32095.4	chr7	+	1412	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	103	703	-55	25	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTTGGTAGTGTCA	NA	False	NA	41	True	AATAAA	-36	NA	131162053	131172918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.6	chr7	+	3510	7	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	150	715	-8	13	intron_retention	FALSE	canonical	3	1325	junction_6	54.6829244117597	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTGTTTGTAAACATT	NA	False	NA	29	True	AATAAA	-24	NA	131162100	131172906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ES.32095.7	chr7	+	1426	8	NNC	ENSMUSG00000066979.7	novel	2218	8	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	476.841607210766	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTGGGTGTTTGTAAA	NA	False	NA	25	True	AATAAA	-20	NA	131162100	131172902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167844_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.8	chr7	+	2981	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	150	-913	-8	910	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTTCTGTGATGCTCT	NA	False	NA	NA	False	TATAAA	-24	NA	131162100	131174534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32095.9	chr7	+	2069	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	153	-4	-5	1	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTGTTACCTTGGT	NA	False	NA	12	True	ATTAAA	-21	NA	131162103	131173625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ES.32096.1	chr7	-	371	1	Antisense	novelGene_ENSMUSG00000066979.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	131163918	131163547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_131163500_131163900
ES.32097.1	chr7	-	2167	1	Antisense	novelGene_ENSMUSG00000066979.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGACCAGGACCAGG	NA	False	NA	NA	False	NA	NA	NA	131166608	131164441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_131164400_131166600
ES.32098.1	chr7	-	862	1	FSM	ENSMUSG00000062758.7	ENSMUST00000085365.6	801	1	-18	-43	-18	43	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCGCCAACTCC	NA	False	NA	NA	False	CATAAA	-17	NA	131216735	131215873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_131215900_131216700
ES.32099.1	chr7	-	6179	14	FSM	ENSMUSG00000030862.14	ENSMUST00000033149.5	3498	14	31	-2712	31	2712	multi-exon	TRUE	canonical	0	0	junction_2	1.10940039245046	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTGTGGTGATGACTAA	NA	False	NA	NA	False	NA	NA	NA	131756437	131641832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_131645876_131649443_131649544_131650717_131650858_131656459_131656758_131659362_131659543_131661462_131661660_131663795_131663920_131672545_131672635_131680501_131680653_131681765_131681851_131708011_131708152_131730080_131730191_131745396_131745496_131756014
ES.32099.2	chr7	-	4538	11	ISM	ENSMUSG00000030862.14	ENSMUST00000033149.5	3498	14	45	9259	45	2557	5prime_fragment	FALSE	canonical	0	0	junction_1	1.22065556157337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACATACCTACAAGAAT	NA	False	NA	NA	False	NA	NA	NA	131756423	131653803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_131656758_131659362_131659543_131661462_131661660_131663795_131663920_131672545_131672635_131680501_131680653_131681765_131681851_131708011_131708152_131730080_131730191_131745396_131745496_131756014
ES.32099.3	chr7	-	3920	10	NIC	ENSMUSG00000030862.14	novel	3498	14	NA	NA	4	2078	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.22726233524303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTCATGCAAATGCATT	NA	False	NA	NA	False	NA	NA	NA	131756464	131654282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_131656758_131661462_131661660_131663795_131663920_131672545_131672635_131680501_131680653_131681765_131681851_131708011_131708152_131730080_131730191_131745396_131745496_131756014
ES.321.1	chr1	-	5375	8	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	26	-5	intron_retention	FALSE	canonical	2	2	junction_3	91.7463228424008	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTCTTTGGCTATTTG	NA	False	NA	NA	False	NA	NA	NA	37929462	37913886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37918445_37918640_37918702_37919077_37919170_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ES.321.10	chr1	-	1193	7	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	78.0056977975897	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGGATCCACTCAC	NA	False	NA	-3	True	AATAAA	-16	NA	37929443	37917971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921794_37924295_37924398_37929240
ES.321.11	chr1	-	4142	3	FSM	ENSMUSG00000026088.16	ENSMUST00000138806.2	989	3	-115	-3038	16	-1	multi-exon	FALSE	canonical	3	173	junction_1	23	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGGATCCACTCAC	NA	False	NA	-3	True	AATAAA	-16	NA	37929472	37917971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37921780_37924295_37924398_37929240
ES.321.2	chr1	-	6688	5	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	44	-8	intron_retention	FALSE	canonical	3	173	junction_3	16.5906600230371	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATATTCTTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	37929444	37913889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37918445_37918640_37918702_37920013_37921780_37924295_37924398_37929240
ES.321.3	chr1	-	1382	8	NNC	ENSMUSG00000026088.16	novel	1175	8	NA	NA	28	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.7013787090623	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	37929460	37913906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37914207_37918049_37918445_37918640_37918702_37920013_37920130_37920815_37920867_37921642_37921780_37924295_37924398_37929240
ES.321.4	chr1	-	2533	6	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	27	21	intron_retention	FALSE	canonical	3	173	junction_4	19.99599959992	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTGTTCAGCAGGT	NA	False	NA	21	True	AATAAA	-40	NA	37929461	37917947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37918445_37918640_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ES.321.5	chr1	-	1231	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	20	-20	16	20	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGCTGTTCAGCAGG	NA	False	NA	20	True	AATAAA	-39	NA	37929472	37917948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ES.321.6	chr1	-	3971	4	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	173	junction_2	18.8030730348939	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGATCCACTCACC	NA	False	NA	-2	True	AATAAA	-17	NA	37929496	37917970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37918445_37918640_37921780_37924295_37924398_37929240
ES.321.7	chr1	-	1166	7	NNC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	74.5087616026166	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGATCCACTCACC	NA	False	NA	-2	True	AATAAA	-17	NA	37929465	37917970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37918445_37918640_37918702_37920013_37920130_37920815_37920867_37921642_37921780_37924295_37924398_37929240
ES.321.8	chr1	-	2665	5	NNC	ENSMUSG00000026088.16	novel	1175	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_3	88.6651002367899	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGATCCACTCACC	NA	False	NA	-2	True	AATAAA	-17	NA	37929488	37917970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_37918445_37918640_37918702_37920013_37921794_37924295_37924398_37929240
ES.321.9	chr1	-	3678	6	NIC	ENSMUSG00000026088.16	novel	1231	7	NA	NA	62	-1	intron_retention	FALSE	canonical	3	197	junction_3	13.1969693490589	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGGATCCACTCAC	NA	False	NA	-3	True	AATAAA	-16	NA	37929426	37917971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37924398_37929240
ES.3210.1	chr10	+	177	1	Intergenic	novelGene_2519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGGTTAGGA	8808	False	NA	NA	False	NA	NA	NA	77847168	77847345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77847200_77847300
ES.32100.1	chr7	-	181	1	Intergenic	novelGene_26276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGAGCCAGTCATG	NA	False	NA	NA	False	NA	NA	NA	131822718	131822537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_131822500_131822700
ES.32101.1	chr7	-	4857	8	FSM	ENSMUSG00000030930.15	ENSMUST00000080215.6	4813	8	-43	-1	-43	1	multi-exon	FALSE	canonical	0	0	junction_3	1.67819144635296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGCCAGTTGTTTCCA	NA	False	NA	NA	False	NA	NA	NA	131919000	131837507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_131840194_131843145_131843294_131849592_131849750_131864411_131864569_131868385_131868533_131870647_131870988_131871733_131872731_131918775
ES.32101.2	chr7	-	3024	3	NNC	ENSMUSG00000030930.15	novel	5041	8	NA	NA	35833	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGGCCAGTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	131844521	131837509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_131840194_131843145_131843294_131844329
ES.32102.1	chr7	+	197	1	Intergenic	novelGene_26277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGTAAAATTT	NA	False	NA	NA	False	AATAAA	-8	NA	132088744	132088941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132088700_132088900
ES.32103.1	chr7	+	179	1	Intergenic	novelGene_26278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTTAAAAAAAACACAAA	NA	False	NA	3	True	NA	NA	NA	132143559	132143738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132143600_132143700
ES.32104.1	chr7	+	209	1	Intergenic	novelGene_26279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCCAAATGAAGACT	NA	False	NA	NA	False	NA	NA	NA	132189694	132189903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132189700_132189900
ES.32105.1	chr7	-	2178	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	-17	-9	-17	9	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTATTTACTTATTTAT	NA	False	NA	4	True	AATAAA	-33	NA	132178144	132159197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ES.32105.2	chr7	-	2126	10	NNC	ENSMUSG00000030934.10	novel	2152	10	NA	NA	-13380	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	151.295965365248	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGATGTGAATCTATT	NA	False	NA	-7	True	AATAAA	-22	NA	132191507	132159208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132191427
ES.32105.3	chr7	-	3459	9	NIC	ENSMUSG00000030934.10	novel	2152	10	NA	NA	0	-8	intron_retention	FALSE	canonical	3	402	junction_5	34.0073521462639	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTACAATGATGTGAA	NA	False	NA	-13	True	AATAAA	-16	NA	132178127	132159214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ES.32105.4	chr7	-	3731	8	NIC	ENSMUSG00000030934.10	novel	2152	10	NA	NA	2	-11	intron_retention	FALSE	canonical	3	402	junction_4	45.6740894707228	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTGTACAATGATGT	NA	False	NA	-16	True	AATAAA	-13	NA	132178125	132159217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132160060_132161374_132161520_132162480_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ES.32105.6	chr7	-	2008	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	1	143	1	-143	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTATTTTGTATTTC	NA	False	NA	-21	True	AATAAA	-23	NA	132178126	132159349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ES.32106.1	chr7	+	2554	2	NIC	ENSMUSG00000087657.9	novel	541	2	NA	NA	-1649	150	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCCTGGGCAGCCGGA	NA	False	NA	NA	False	NA	NA	NA	132197466	132201516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132199546_132201041
ES.32106.2	chr7	+	1748	1	Genic_Genomic	ENSMUSG00000087657.9	novel	NA	NA	NA	NA	1868	1381	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTGTAGCTTTTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	132200999	132202747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_132201000_132202700
ES.32107.1	chr7	-	3704	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-167	-273	-167	273	multi-exon	FALSE	canonical	3	59	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGTCTACTCTCTAAA	NA	False	NA	NA	False	AGTAAA	-21	NA	132201533	132196333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132199546_132201041
ES.32107.2	chr7	-	3434	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-167	-3	-167	3	multi-exon	FALSE	canonical	3	59	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACGAATTATTCATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	132201533	132196603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132199546_132201041
ES.32107.3	chr7	-	4747	1	NIC	ENSMUSG00000048528.8	novel	3264	2	NA	NA	9	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTTTTGACGAATTAT	NA	False	NA	NA	False	AATAAA	-13	NA	132201357	132196610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132196600_132201400
ES.32107.4	chr7	-	3354	3	NNC	ENSMUSG00000048528.8	novel	3264	2	NA	NA	-167	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATTTTTGACGAATT	NA	False	NA	NA	False	AATAAA	-11	NA	132201533	132196612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132198239_132198309_132199546_132201041
ES.32107.5	chr7	-	2389	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	45	830	45	-830	multi-exon	FALSE	canonical	3	59	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGAGGTTCATGCCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	132201321	132197436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132199546_132201041
ES.32107.6	chr7	-	2335	3	NNC	ENSMUSG00000048528.8	novel	3264	2	NA	NA	-168	-1024	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTCACCAGTTCCTGT	NA	False	NA	NA	False	TATAAA	-33	NA	132201534	132197630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132198239_132198311_132199546_132201041
ES.32107.7	chr7	-	2389	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	-166	1041	-166	-1041	multi-exon	FALSE	canonical	3	59	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTGTTTGGTTTGAAG	NA	False	NA	NA	False	TATAAA	-16	NA	132201532	132197647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132199546_132201041
ES.32108.1	chr7	+	1619	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	-8	1	-7	-1	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGACTCAGCCTTTCTT	NA	False	NA	11	True	AATAAA	-19	NA	132212359	132308148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ES.32108.10	chr7	+	1138	4	NIC	ENSMUSG00000030946.14	novel	620	5	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	151.112173198882	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212404	132308146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132212560_132243252_132243317_132244215_132244309_132307320
ES.32108.11	chr7	+	2813	7	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	17	34655	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	120.604611115091	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTATTTCTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	132212412	132342804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132340729
ES.32108.12	chr7	+	1592	7	NNC	ENSMUSG00000030946.14	novel	497	3	NA	NA	-1696	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.355776249685	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTTGACTCAGCCTT	NA	False	NA	7	True	AATAAA	-15	NA	132230403	132308144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132230581_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ES.32108.13	chr7	+	5444	1	Intergenic	novelGene_26280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAAACCCAGGAATAAA	NA	False	NA	NA	False	NA	NA	NA	132246480	132251924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132246500_132251900
ES.32108.14	chr7	+	177	1	Intergenic	novelGene_26281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132327419	132327596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132327400_132327600
ES.32108.2	chr7	+	3305	8	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	-2	1915	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	111.943681175411	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTCTTAGTCATGA	NA	False	NA	NA	False	NA	NA	NA	132212364	132310064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320_132308288_132308512
ES.32108.3	chr7	+	2208	6	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	1	54463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	153.879693267175	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTATTGTTTTACCAC	NA	False	NA	NA	False	AGTAAA	-10	NA	132212368	132362612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132360998
ES.32108.4	chr7	+	3201	7	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	9	1915	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	147.862173060666	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTTCTTAGTCATGA	NA	False	NA	NA	False	NA	NA	NA	132212376	132310064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320_132308288_132308512
ES.32108.5	chr7	+	1674	6	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	10	639	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	151.761128092802	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	TTTAAA	-13	NA	132212377	132308788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132243252_132243317_132244215_132244309_132251986_132252079_132307320_132308288_132308512
ES.32108.6	chr7	+	4829	5	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	12	-7	intron_retention	FALSE	canonical	2	20	junction_4	133.886845881139	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCCCACTTTGACTCA	NA	False	NA	2	True	AATAAA	-10	NA	132212379	132308139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132212560_132232210_132235884_132243252_132243317_132244215_132244309_132307320
ES.32108.7	chr7	+	977	7	NNC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	13	25322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	120.604611115091	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTTTCTCTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	132212380	132333471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132333264
ES.32108.8	chr7	+	1952	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	20	-360	-8	360	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTGGCAGGGCGTGGTA	NA	False	NA	NA	False	NA	NA	NA	132212387	132308509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ES.32108.9	chr7	+	1496	6	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_5	121.921942241747	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212388	132308146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320
ES.32109.1	chr7	+	6237	1	Antisense	novelGene_ENSMUSG00000110159.2_AS_novelGene_ENSMUSG00000030960.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAACCTGCATATGACT	NA	False	NA	NA	False	NA	NA	NA	132434095	132440332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_132434100_132440300
ES.3211.1	chr10	-	199	1	Intergenic	novelGene_2520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTGTTGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	77850285	77850086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_77850100_77850300
ES.32110.1	chr7	+	158	1	Intergenic	novelGene_26285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAATAAAATAA	NA	False	NA	NA	False	AAAACA	-11	NA	132448706	132448864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132448700_132448900
ES.32111.1	chr7	-	6092	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-11	4	multi-exon	FALSE	canonical	1	1	junction_6	138.97279410014	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132454356	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132438828_132438937_132451835_132452439_132453154_132453221_132454227
ES.32111.10	chr7	-	5254	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.9754451854648	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGCGCATGGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	132415611	132313808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132415309
ES.32111.11	chr7	-	5304	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	-177	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCTGCGCATGGCTGT	NA	False	NA	-11	True	AATAAA	-20	NA	132415792	132313809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
ES.32111.12	chr7	-	4814	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	54.8351063543137	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	-12	True	AATAAA	-19	NA	132415385	132313810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132414794
ES.32111.13	chr7	-	5025	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	5	0	multi-exon	FALSE	canonical	3	17	junction_1	137.50818157477	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	-12	True	AATAAA	-19	NA	132454339	132313810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.14	chr7	-	4538	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	-12	True	AATAAA	-19	NA	132415624	132313810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
ES.32111.16	chr7	-	5082	5	NNC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	-3837	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.6373204105224	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132392501	132313812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132392419
ES.32111.17	chr7	-	5343	7	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	5052	5	NA	NA	13	0	multi-exon	FALSE	canonical	0	0	junction_4	140.546552192977	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132454389	132313812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132452323_132452439_132453154_132453221_132454227
ES.32111.18	chr7	-	3636	3	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	5052	5	NA	NA	-8	0	multi-exon	FALSE	non_canonical	0	0	junction_1	196	405	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132454353	132313812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317283_132453180_132453221_132454227
ES.32111.19	chr7	-	6848	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	9	0	multi-exon	FALSE	canonical	0	0	junction_7	130.991470837222	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132454359	132313812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132451293_132452439_132453154_132453221_132454227
ES.32111.2	chr7	-	5693	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-11	4	multi-exon	FALSE	canonical	0	0	junction_4	126.811320910679	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132454356	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429563_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.20	chr7	-	5285	5	NIC	ENSMUSG00000030956.16	novel	5052	5	NA	NA	165	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	51.7946667138616	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132381887	132313812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132381602
ES.32111.21	chr7	-	5540	8	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	5465	5	NA	NA	-1	-1	multi-exon	FALSE	canonical	3	11	junction_5	139.083589606967	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCCTGCGCATGG	NA	False	NA	-15	True	AATAAA	-16	NA	132454403	132313813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132452319_132452439_132453154_132453221_132454227
ES.32111.22	chr7	-	4889	4	FSM	ENSMUSG00000030956.16	ENSMUST00000106168.2	3630	4	21	-1280	21	-1	multi-exon	FALSE	canonical	0	0	junction_3	51.1490197581754	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTGCCTGCGCATGG	NA	False	NA	-15	True	AATAAA	-16	NA	132378624	132313813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132378484
ES.32111.23	chr7	-	5126	5	NNC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.5217643406009	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGGCTGCCTGCGCATG	NA	False	NA	-16	True	AATAAA	-15	NA	132415597	132313814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132317732_132361117_132361897_132373306_132373359_132381024_132381115_132415309
ES.32111.24	chr7	-	5365	5	FSM	ENSMUSG00000030956.16	ENSMUST00000106169.8	4536	5	-110	-719	-110	1	multi-exon	FALSE	canonical	0	0	junction_4	52.6373204105224	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGGCTGCCTGCGCAT	NA	False	NA	-17	True	AATAAA	-14	NA	132404603	132313815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132404235
ES.32111.25	chr7	-	5598	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-10	1	multi-exon	FALSE	canonical	3	26	junction_5	132.254903028205	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGGCTGCCTGCGCAT	NA	False	NA	-17	True	AATAAA	-14	NA	132454355	132313815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.26	chr7	-	5710	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-1	1	multi-exon	FALSE	canonical	3	12	junction_7	121.939470127601	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGGCTGCCTGCGCAT	NA	False	NA	-17	True	AATAAA	-14	NA	132454369	132313815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132453154_132453221_132454227
ES.32111.27	chr7	-	5322	6	Fusion	ENSMUSG00000030960.17_ENSMUSG00000030956.16	novel	5465	5	NA	NA	9	0	multi-exon	FALSE	canonical	1	2	junction_4	147.75032994887	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132454359	132313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132380864_132381115_132429431_132429612_132453154_132453221_132454227
ES.32111.28	chr7	-	5044	5	NNC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	52.2158979622107	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132415756	132313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415708
ES.32111.3	chr7	-	5452	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	-140	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132415755	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
ES.32111.30	chr7	-	4586	11	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-5	0	multi-exon	FALSE	non_canonical	0	0	junction_1	129.304910966289	405	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132454350	132313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132315167_132316389_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.31	chr7	-	4986	4	NIC	ENSMUSG00000030956.16	novel	4536	5	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	44.0479536666827	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132415533	132313816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132415491
ES.32111.32	chr7	-	3610	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	28	703	28	15	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCTCACTCCCCCAGT	NA	False	NA	NA	False	AATAAA	-22	NA	132415587	132314519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
ES.32111.33	chr7	-	4994	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	14	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	44.9221548904324	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCTCACTCCCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	132415548	132314520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132414794
ES.32111.34	chr7	-	4369	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	72	14	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCTCACTCCCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	132415386	132314520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
ES.32111.35	chr7	-	4742	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	13	710	13	14	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGCTCACTCCCCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	132415244	132314520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
ES.32111.36	chr7	-	4889	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-11	13	multi-exon	FALSE	canonical	3	26	junction_5	130.145051288937	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACATGCTCACTCCCCCA	NA	False	NA	NA	False	AATAAA	-20	NA	132454356	132314521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.37	chr7	-	4342	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	7	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAGGACATGCTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	132415548	132314527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
ES.32111.38	chr7	-	4006	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	14	-5	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCCAGTCAGCTTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	132415601	132315098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
ES.32111.39	chr7	-	2998	4	NIC	ENSMUSG00000030956.16	novel	4341	4	NA	NA	86	-5	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCCAGTCAGCTTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	132415372	132315098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
ES.32111.4	chr7	-	5474	9	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	10	4	multi-exon	FALSE	canonical	0	0	junction_4	134.455382934266	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132454358	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429563_132429612_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.40	chr7	-	3861	5	NNC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	49	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.6373204105224	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTTCCAGTCAGCTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	132415566	132315099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415418
ES.32111.41	chr7	-	3887	11	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	11	-834	multi-exon	FALSE	canonical	1	1	junction_8	135.386705403448	388	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGTTTCAACTTTAAT	NA	False	NA	NA	False	AAGAAA	-15	NA	132454357	132315927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132448309_132448492_132452319_132452439_132453154_132453221_132454227
ES.32111.42	chr7	-	3127	4	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	10	-836	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.9754451854648	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTGTTTCAACTTTA	NA	False	NA	NA	False	AAGAAA	-13	NA	132415605	132315929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132380864_132381115_132415309
ES.32111.43	chr7	-	3122	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	-836	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTGTTTCAACTTTA	NA	False	NA	NA	False	AAGAAA	-13	NA	132415548	132315929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
ES.32111.44	chr7	-	3014	5	NNC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	66	-836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.6373204105224	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTGTTTCAACTTTA	NA	False	NA	NA	False	AAGAAA	-13	NA	132415549	132315929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415418
ES.32111.45	chr7	-	3692	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-1	-836	multi-exon	FALSE	canonical	3	29	junction_4	122.307243155894	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTGTTTCAACTTTA	NA	False	NA	NA	False	AAGAAA	-13	NA	132454346	132315929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.46	chr7	-	3565	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	-11	-837	multi-exon	FALSE	canonical	0	0	junction_4	119.589524294512	388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTTTGTTTCAACTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	132454356	132315930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429563_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.47	chr7	-	2944	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	62	-837	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTTTGTTTCAACTTT	NA	False	NA	NA	False	AAGAAA	-12	NA	132415553	132315930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
ES.32111.48	chr7	-	2537	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	9	-2038	multi-exon	FALSE	canonical	3	29	junction_4	122.307243155894	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCTCTTTGTTCCTTA	NA	False	NA	NA	False	AAAACA	-16	NA	132454393	132317131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.49	chr7	-	1029	4	NIC	ENSMUSG00000030956.16	novel	4341	4	NA	NA	22	-2038	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	49.9355139710763	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCTCTTTGTTCCTTA	NA	False	NA	NA	False	AAAACA	-16	NA	132415436	132317131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132373306_132373359_132380864_132381115_132415309
ES.32111.5	chr7	-	4462	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	-111	-10	-111	4	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132415726	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
ES.32111.50	chr7	-	1787	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	18	-2038	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	38.4537059332387	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCTCTTTGTTCCTTA	NA	False	NA	NA	False	AAAACA	-16	NA	132415597	132317131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415491
ES.32111.51	chr7	-	2241	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	-99	3323	-99	-2040	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTCCTCTTTGTTCCT	NA	False	NA	NA	False	AAAACA	-14	NA	132415356	132317133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
ES.32111.52	chr7	-	3209	1	Intergenic	novelGene_26282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	132348536	132345327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132345300_132348500
ES.32111.53	chr7	-	1471	4	FSM	ENSMUSG00000030956.16	ENSMUST00000134946.3	516	4	-120	-835	37	0	multi-exon	FALSE	canonical	3	62	junction_3	31.3155978174881	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132415578	132360996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132361897_132373306_132373359_132380864_132381115_132415309
ES.32111.54	chr7	-	3652	1	Intergenic	novelGene_26283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTTGGTGACTATTT	NA	False	NA	NA	False	AATAAA	-40	NA	132426586	132422934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132422900_132426600
ES.32111.55	chr7	-	773	1	Intergenic	novelGene_26284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTATTGGAATCTTAAAT	NA	False	NA	NA	False	AGTAAA	-21	NA	132428649	132427876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132427900_132428600
ES.32111.56	chr7	-	1314	6	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	-10	227	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	113.265352160314	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGAGATAATGTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	132454378	132428958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.57	chr7	-	1207	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	12	227	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	137.661496069162	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGAGATAATGTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	132454390	132428958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132429612_132433088_132433306_132438828_132438937_132453154_132453221_132454227
ES.32111.59	chr7	-	1079	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	0	223	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	142.065785817698	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTAGAGATAATGTC	NA	False	NA	-10	True	ATTAAA	-16	NA	132454368	132428962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132429612_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.60	chr7	-	1203	7	NNC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.602716664359	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTTGGTTTTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	132454340	132429187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132429612_132431100_132431261_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.61	chr7	-	1094	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	11	2	11	-2	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTTGGTTTTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	132454391	132429187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ES.32111.63	chr7	-	827	5	NIC	ENSMUSG00000030960.17	novel	563	5	NA	NA	3	-6	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATCTGTTTTTGGTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	132454341	132429191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.65	chr7	-	7122	3	ISM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	9089	6	8795	-6	3prime_fragment	FALSE	canonical	3	251	junction_2	9.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATCTGTTTTTGGTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	132445313	132429191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_132429612_132433088_132433306_132438828
ES.32111.66	chr7	-	2866	2	Genic_Genomic	ENSMUSG00000110159.2	novel	2526	1	NA	NA	-6449	-1806	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTAATCCATCAAACCT	NA	False	NA	NA	False	AAGAAA	-9	NA	132448401	132441232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_132441390_132445692
ES.32111.67	chr7	-	3919	1	FSM	ENSMUSG00000110159.2	ENSMUST00000211468.2	2526	1	-3226	1833	-3226	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	132445178	132441259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132441300_132445200
ES.32111.68	chr7	-	2062	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	6	-1257	6	1257	multi-exon	FALSE	canonical	3	351	junction_1	20.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGTACTGTGGAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	132454362	132450577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132452439_132453154_132453221_132454227
ES.32111.69	chr7	-	1404	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	11	-604	11	604	multi-exon	FALSE	canonical	3	351	junction_1	20.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTCTTACTGGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	132454357	132451230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132452439_132453154_132453221_132454227
ES.32111.7	chr7	-	5855	10	Fusion	ENSMUSG00000030956.16_ENSMUSG00000030960.17	novel	1107	6	NA	NA	16	4	multi-exon	FALSE	canonical	3	29	junction_4	122.307243155894	405	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCGCATGGCTGTGTG	NA	False	NA	-8	True	AATAAA	-23	NA	132454386	132313806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132429431_132429612_132433088_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ES.32111.8	chr7	-	5799	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	-331	-3	27	3	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGCGCATGGCTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	132415588	132313807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
ES.32112.1	chr7	-	222	1	Intergenic	novelGene_26286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTTCCCTACATCAG	NA	False	NA	NA	False	NA	NA	NA	132460190	132459968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132460000_132460200
ES.32113.1	chr7	+	2905	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	-7	-6	-7	6	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGTCTGTCTTAGC	NA	False	NA	22	True	AATAAA	-24	NA	132460946	132486846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.10	chr7	+	3345	9	NNC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	75.4543529228102	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGTGTCTGTCTTAG	NA	False	NA	21	True	AATAAA	-23	NA	132460975	132486845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480813_132482495_132482611_132484763
ES.32113.11	chr7	+	5008	7	NIC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	4	-1586	intron_retention	FALSE	canonical	3	195	junction_6	22.4499443206436	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGGCACTACTTTTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	132460981	132485251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132478447_132480257_132482611_132484763
ES.32113.12	chr7	+	4978	8	NIC	ENSMUSG00000030965.20	novel	2827	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	30	junction_5	70.9964069225927	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132460981	132486839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132482611_132484763
ES.32113.13	chr7	+	1226	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	15	1586	15	-1586	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGGCACTACTTTTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	132460992	132485251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.14	chr7	+	2657	6	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	12344	1	-7806	0	3prime_fragment	FALSE	canonical	3	195	junction_5	20.3312567245608	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132473297	132486839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.15	chr7	+	2584	5	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	15600	6	-4550	-3	3prime_fragment	FALSE	canonical	3	195	junction_4	22.0609949911603	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATACGATATTTTAGT	NA	False	NA	10	True	AATAAA	-12	NA	132476553	132486834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.16	chr7	+	2275	3	ISM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	19279	0	-847	0	3prime_fragment	FALSE	canonical	3	195	junction_2	18.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACGATATTTTAGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	132480256	132486837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_132480343_132482495_132482611_132484763
ES.32113.17	chr7	+	4181	1	NIC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	1555	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132482658	132486839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132482700_132486800
ES.32113.18	chr7	+	3168	1	Genic_Genomic	ENSMUSG00000030965.20	novel	NA	NA	NA	NA	3987	1418	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAGGAGCTGAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	132485090	132488258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_132485100_132488300
ES.32113.2	chr7	+	3049	9	NNC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.2084928009996	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTTAGTGTCTGTCTT	NA	False	NA	19	True	AATAAA	-21	NA	132460966	132486843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473535_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.3	chr7	+	1802	1	FSM	ENSMUSG00000030965.20	ENSMUST00000210077.2	1778	1	3	-27	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTTTTAAAGTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	132460966	132462768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132461000_132462800
ES.32113.4	chr7	+	2952	10	NNC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	93.6648872903347	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTAGTGTCTGTCTTA	NA	False	NA	20	True	AATAAA	-22	NA	132460968	132486844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132480741_132480813_132482495_132482611_132484763
ES.32113.5	chr7	+	5030	8	NIC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	195	junction_7	20.8111037865925	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	16	True	AATAAA	-18	NA	132460968	132486840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132482611_132484763
ES.32113.7	chr7	+	2837	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	-8	-2	-3	0	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132460969	132486839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
ES.32113.8	chr7	+	3350	1	FSM	ENSMUSG00000030965.20	ENSMUST00000210077.2	1778	1	7	-1579	-2	1579	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGAGTCATATGTCTC	NA	False	NA	NA	False	NA	NA	NA	132460970	132464320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132461000_132464300
ES.32113.9	chr7	+	3304	9	NNC	ENSMUSG00000030965.20	novel	2892	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	91.9480152042446	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	16	True	AATAAA	-18	NA	132460973	132486840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480813_132482495_132482611_132484763
ES.32114.1	chr7	-	5547	1	Antisense	novelGene_ENSMUSG00000030965.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAACAAAAACTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	132469613	132464066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_132464100_132469600
ES.32115.1	chr7	-	1022	5	NNC	ENSMUSG00000097595.3	novel	712	3	NA	NA	-7849	134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.866025403784439	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCCAAAGGGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	132498265	132491166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132491808_132494857_132494984_132497541_132497581_132497969_132498022_132498101
ES.32116.1	chr7	+	156	1	Intergenic	novelGene_26287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	132507109	132507265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132507100_132507300
ES.32117.1	chr7	-	2007	1	NIC	ENSMUSG00000097595.3	novel	599	3	NA	NA	55	-39470	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTATTAGTTTTCAACA	NA	False	NA	NA	False	AAAAAG	-9	NA	132532777	132530770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132530800_132532800
ES.32118.1	chr7	+	3029	11	NNC	ENSMUSG00000030967.16	novel	2205	10	NA	NA	-45	592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.4590823117167	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACCCTTAGGAACAAAC	NA	False	NA	NA	False	NA	NA	NA	132532825	132586317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132532889_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.10	chr7	+	3226	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	10	1772	10	623	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCAAGTTTTTGGAGTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	132532880	132586348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.11	chr7	+	4974	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	33	1	33	-1	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGATTCAGATCTGAC	NA	False	NA	3	True	ATTAAA	-15	NA	132532903	132588119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.13	chr7	+	2553	10	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	36	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.7815620405734	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132532906	132585888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584598_132584642_132585461
ES.32118.15	chr7	+	5142	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	36	5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAGATCTGACTTTCTG	NA	False	NA	9	True	ATTAAA	-21	NA	132532906	132588125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.18	chr7	+	3131	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	38	391	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGTGAGATGCTCTCT	NA	False	NA	NA	False	CATAAA	-16	NA	132532908	132586116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.19	chr7	+	3333	8	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	53	1033	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	51.0445983470158	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAAGGTGGTCAATGCA	NA	False	NA	2	True	AATAAA	-13	NA	132532923	132586758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.2	chr7	+	2489	10	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	-45	217	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38.6810318143431	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTAATTTTATTGAC	NA	False	NA	NA	False	NA	NA	NA	132532825	132585942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132532889_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.21	chr7	+	2993	12	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	60	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4728058684219	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132532930	132585888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132548260_132548373_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.23	chr7	+	2901	7	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	61	198	intron_retention	FALSE	canonical	3	7	junction_1	43.4987228420432	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132532931	132585923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099
ES.32118.24	chr7	+	2591	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	61	193	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	43.7807035119355	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132532931	132585918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132551313_132552165_132568235_132568424_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.25	chr7	+	4029	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	62	917	62	-917	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCATTTATGCTGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	132532932	132587203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.26	chr7	+	2224	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	73	535	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	38.7699545395658	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTAGTTCCTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	132532943	132586260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.27	chr7	+	4180	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	73	-920	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGATCATTTATGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	132532943	132587200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.28	chr7	+	3086	10	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	95	535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.7815620405734	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTAGTTCCTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	132532965	132586260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584378_132584642_132585461
ES.32118.29	chr7	+	2692	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	105	1035	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	38.7699545395658	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGGTGGTCAATGCATT	NA	False	NA	4	True	AATAAA	-15	NA	132532975	132586760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.3	chr7	+	1977	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	-12	203	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	38.7699545395658	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	132532858	132585928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.30	chr7	+	4091	8	NIC	ENSMUSG00000030967.16	novel	2210	9	NA	NA	-421	198	intron_retention	FALSE	canonical	0	0	junction_2	43.6184757708408	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132549475	132585923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132552165_132568235_132568424_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.31	chr7	+	2596	10	FSM	ENSMUSG00000030967.16	ENSMUST00000215716.2	2205	10	-145	-246	-145	201	multi-exon	FALSE	canonical	3	20	junction_1	32.7870043511295	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	132549751	132585926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.33	chr7	+	3722	4	NIC	ENSMUSG00000030967.16	novel	2210	9	NA	NA	-9673	200	intron_retention	FALSE	canonical	3	125	junction_3	2.82842712474619	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	132572914	132585925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132574491_132575153_132575353_132583009_132583131_132584099
ES.32118.4	chr7	+	2784	10	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	1	200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.6810318143431	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	132532871	132585925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132551341_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.5	chr7	+	3812	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	2	1036	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGGTCAATGCATTG	NA	False	NA	5	True	AATAAA	-16	NA	132532872	132586761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.6	chr7	+	2994	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	3	219	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTAATTTTATTGACAG	NA	False	NA	NA	False	NA	NA	NA	132532873	132585944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.7	chr7	+	1764	8	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	3	193	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	43.7352890719163	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132532873	132585918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_132533275_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.8	chr7	+	3643	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	6	1359	6	1036	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGGTCAATGCATTG	NA	False	NA	5	True	AATAAA	-16	NA	132532876	132586761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32118.9	chr7	+	2826	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	6	2176	6	219	multi-exon	FALSE	canonical	3	56	junction_1	22.7129157795708	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTAATTTTATTGACAG	NA	False	NA	NA	False	NA	NA	NA	132532876	132585944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ES.32119.1	chr7	+	1133	1	Intergenic	novelGene_26288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132590349	132591482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132590300_132591500
ES.3212.1	chr10	+	179	1	Intergenic	novelGene_2521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACAAAAAAAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	77851861	77852040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77851900_77852000
ES.32120.1	chr7	+	196	1	Intergenic	novelGene_26289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAGAGAGGTGC	NA	False	NA	NA	False	NA	NA	NA	132608353	132608549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132608400_132608500
ES.32121.1	chr7	+	3909	1	Intergenic	novelGene_26290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATCTAACTTGGACG	8908	False	NA	NA	False	AAAAAG	-5	NA	132673659	132677568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132673700_132677600
ES.32122.1	chr7	+	4037	1	Intergenic	novelGene_26291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGGGGCAGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	132686464	132690501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132686500_132690500
ES.32123.1	chr7	+	2324	1	Intergenic	novelGene_26293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACCCAG	NA	False	NA	NA	False	NA	NA	NA	132714887	132717211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132714900_132717200
ES.32124.1	chr7	-	3484	1	Genic_Genomic	ENSMUSG00000085663.2	novel	NA	NA	NA	NA	-3250	-3737	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTTCCTGGGTATCT	1249	False	NA	NA	False	AATAAA	-21	NA	132588531	132585047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_132585000_132588500
ES.32124.10	chr7	-	5398	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	1650	3057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	273.748808216584	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	8841	False	NA	-12	True	AATAAA	-21	NA	132711870	132586234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132711681
ES.32124.100	chr7	-	2049	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	33	-192	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	272.158207666056	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGACTAGTCCCTTTGG	NA	False	NA	-3	True	AATAAA	-20	NA	132724311	132589541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724164
ES.32124.101	chr7	-	2057	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	24	-193	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGACTAGTCCCTTTG	NA	False	NA	-4	True	AATAAA	-19	NA	132724871	132589542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.102	chr7	-	1954	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	60	-193	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	273.218319297956	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGACTAGTCCCTTTG	NA	False	NA	-4	True	AATAAA	-19	NA	132725439	132589542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132725386
ES.32124.103	chr7	-	2020	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	50	-193	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGACTAGTCCCTTTG	NA	False	NA	-4	True	AATAAA	-19	NA	132725449	132589542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
ES.32124.104	chr7	-	2047	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-24	-194	combination_of_known_splicesites	FALSE	canonical	2	21	junction_9	280.830118675963	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAAGACTAGTCCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	132725120	132589543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724869
ES.32124.105	chr7	-	2148	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	72	-194	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	329.604514232541	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAAGACTAGTCCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	132724823	132589543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724415
ES.32124.106	chr7	-	1973	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-150	-200	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCCCATCAAGACTAGT	NA	False	NA	-11	True	AATAAA	-12	NA	132724494	132589549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.109	chr7	-	2210	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	15	-284	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCTGGGCACAGCAGG	NA	False	NA	-12	True	AATAAA	-19	NA	132725570	132589633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
ES.32124.110	chr7	-	1762	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	14	-284	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	335.451308310034	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCTGGGCACAGCAGG	6297	False	NA	-12	True	AATAAA	-19	NA	132714414	132589633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132714302
ES.32124.111	chr7	-	2194	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	2	-284	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	334.179963393804	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCTGGGCACAGCAGG	NA	False	NA	-12	True	AATAAA	-19	NA	132725094	132589633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132631199_132631359_132683485_132683590_132724869
ES.32124.112	chr7	-	4122	1	Intergenic	novelGene_26292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	648	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATTTACTTCGTACAT	NA	False	NA	NA	False	NA	NA	NA	132706635	132702513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132702500_132706600
ES.32124.113	chr7	-	3291	1	FSM	ENSMUSG00000110282.2	ENSMUST00000209529.2	3738	1	-2985	3432	-2985	-3432	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCACCAAACCCCAAAC	NA	False	NA	NA	False	NA	NA	NA	132724985	132721694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132721700_132725000
ES.32124.114	chr7	-	3211	1	FSM	ENSMUSG00000110282.2	ENSMUST00000209529.2	3738	1	-3093	3620	-3093	-3620	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAAAACAACCCC	NA	False	NA	-31	True	NA	NA	NA	132725093	132721882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132721900_132725100
ES.32124.115	chr7	-	763	1	Genic_Genomic	ENSMUSG00000030970.17	novel	NA	NA	NA	NA	-330	-42405	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTGAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132726413	132725650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_132725600_132726400
ES.32124.12	chr7	-	5593	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	4	3057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	331.567302418465	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	NA	False	NA	-12	True	AATAAA	-21	NA	132725150	132586234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132606654_132606758_132627441_132627602_132683485_132683590_132724869
ES.32124.13	chr7	-	5320	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-182	3057	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	NA	False	NA	-12	True	AATAAA	-21	NA	132724526	132586234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.14	chr7	-	5494	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-31	3056	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGCCGTGGATAATTT	NA	False	NA	-13	True	AATAAA	-20	NA	132725616	132586235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
ES.32124.15	chr7	-	5254	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	130	3052	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCTTGCCGTGGATA	NA	False	NA	-17	True	AATAAA	-16	NA	132724765	132586239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.16	chr7	-	4607	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	206	-2492	5	2434	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTTTTAACTTTAAAT	NA	False	NA	NA	False	CATAAA	-16	NA	132724890	132586857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.17	chr7	-	4489	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-133	2275	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTGCTACTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	132724477	132587016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.18	chr7	-	3190	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-210	-983	-9	962	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGGCTGCCTTCTT	NA	False	NA	NA	False	AATGAA	-17	NA	132725105	132588329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ES.32124.19	chr7	-	3219	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	73	960	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	272.158207666056	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTCTGGCTGCCTTC	NA	False	NA	NA	False	AATGAA	-15	NA	132724271	132588331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724164
ES.32124.2	chr7	-	5647	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	3069	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTGTACAAAGTTTCC	NA	False	NA	0	True	AATAAA	-33	NA	132725596	132586222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
ES.32124.20	chr7	-	3345	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-7	-1017	-7	959	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTGTCTGGCTGCCTT	NA	False	NA	NA	False	AATGAA	-14	NA	132725103	132588332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.21	chr7	-	3335	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	109	959	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	272.688118553046	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTGTCTGGCTGCCTT	NA	False	NA	NA	False	AATGAA	-14	NA	132724786	132588332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724562
ES.32124.22	chr7	-	3147	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	1	873	combination_of_known_splicesites	FALSE	canonical	2	21	junction_9	280.830118675963	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTACTTACCTTCT	NA	False	NA	NA	False	TATAAA	-14	NA	132725095	132588418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724869
ES.32124.24	chr7	-	2813	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-17	565	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	270.834709740092	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAGTACATCTCACCT	6266	False	NA	-5	True	AATAAA	-28	NA	132714445	132588726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714349
ES.32124.26	chr7	-	3165	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-36	562	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTAAGTACATCTCA	NA	False	NA	-8	True	AATAAA	-25	NA	132725621	132588729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
ES.32124.27	chr7	-	3187	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	1	558	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	331.931611994583	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	NA	False	NA	-12	True	AATAAA	-21	NA	132725095	132588733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132615246_132615498_132627441_132627602_132683485_132683590_132724869
ES.32124.28	chr7	-	2724	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	-140	558	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_9	330.050763024174	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	NA	False	NA	-12	True	AATAAA	-21	NA	132724484	132588733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724310
ES.32124.29	chr7	-	2822	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	14	558	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	271.36388853346	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGACATTTAAGTACAT	6297	False	NA	-12	True	AATAAA	-21	NA	132714414	132588733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714302
ES.32124.3	chr7	-	5165	9	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	8	3058	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	296.070911058483	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCGTGGATAATTTGT	NA	False	NA	-11	True	AATAAA	-22	NA	132725088	132586233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132724869
ES.32124.30	chr7	-	2751	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-23	556	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	286.458839393492	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725119	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.31	chr7	-	2665	10	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	119	556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	286.806942423335	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132724776	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724715
ES.32124.32	chr7	-	2974	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-11	556	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725596	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
ES.32124.33	chr7	-	2864	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	24	556	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132724871	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.34	chr7	-	2854	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-23	556	combination_of_known_splicesites	FALSE	canonical	2	21	junction_9	280.830118675963	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725119	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724869
ES.32124.35	chr7	-	2973	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-25	556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	339.315266382166	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725121	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593508_132596887_132597095_132600535_132600681_132600908_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.37	chr7	-	2641	10	NIC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	-14	556	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	334.998102076805	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	6269	False	NA	-14	True	AATAAA	-19	NA	132714442	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132714349
ES.32124.38	chr7	-	2883	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-25	556	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	270.565352549065	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTGACATTTAAGTAC	NA	False	NA	-14	True	AATAAA	-19	NA	132725121	132588735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593429_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.39	chr7	-	2703	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	24	555	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	330.945036651029	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCTGACATTTAAGTA	NA	False	NA	-15	True	AATAAA	-18	NA	132724871	132588736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724715
ES.32124.40	chr7	-	2722	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	-247	554	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	329.604514232541	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCTGACATTTAAGT	NA	False	NA	-16	True	AATAAA	-17	NA	132724591	132588737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724415
ES.32124.41	chr7	-	2844	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	41	553	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	272.158207666056	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCCTGACATTTAAG	NA	False	NA	-17	True	AATAAA	-16	NA	132724303	132588738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724164
ES.32124.42	chr7	-	3051	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	133	552	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	132724762	132588739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.43	chr7	-	2684	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	123	552	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	339.526670528252	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCCTGACATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	132724772	132588739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593429_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.46	chr7	-	3323	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-1	551	intron_retention	FALSE	canonical	3	550	junction_7	142.298590607528	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGTCCTGACATTTA	NA	False	NA	-19	True	AATAAA	-14	NA	132725097	132588740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.47	chr7	-	3136	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-4	550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	334.179963393804	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAAGTCCTGACATTT	NA	False	NA	-20	True	AATAAA	-13	NA	132725100	132588741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132669827_132670031_132683485_132683590_132724869
ES.32124.48	chr7	-	2901	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	-69	-511	-11	453	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTAGTGTGAGT	NA	False	NA	-117	True	TTTAAA	-35	NA	132725165	132588838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.49	chr7	-	2702	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-231	-474	28	453	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTTTAGTGTGAGT	NA	False	NA	-117	True	TTTAAA	-35	NA	132725126	132588838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ES.32124.5	chr7	-	5317	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-28	3058	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	270.834709740092	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCGTGGATAATTTGT	6255	False	NA	-11	True	AATAAA	-22	NA	132714456	132586233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714349
ES.32124.50	chr7	-	2684	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	85	437	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCTATCAGAAATGTT	NA	False	NA	-133	True	AAGAAA	-33	NA	132724810	132588854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.51	chr7	-	2671	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-153	437	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCTATCAGAAATGTT	NA	False	NA	-133	True	AAGAAA	-33	NA	132724497	132588854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.52	chr7	-	2556	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	-98	432	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_9	330.050763024174	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATGGCTATCAGAA	NA	False	NA	-138	True	AAGAAA	-28	NA	132724442	132588859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724310
ES.32124.54	chr7	-	2036	9	NNC	ENSMUSG00000030970.17	novel	3463	10	NA	NA	11649	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	296.070911058483	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	64	True	AAGAAA	-4	NA	132605328	132589291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132605180
ES.32124.55	chr7	-	2308	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	266.085625316363	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	64	True	AAGAAA	-4	NA	132724871	132589291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724715
ES.32124.56	chr7	-	2544	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	264.508147322535	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	64	True	AAGAAA	-4	NA	132724807	132589291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724415
ES.32124.57	chr7	-	2869	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	550	junction_7	133.420897173078	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	64	True	AAGAAA	-4	NA	132725106	132589291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.59	chr7	-	2484	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	268.90966884811	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAGTTTCACAAGCTG	NA	False	NA	64	True	AAGAAA	-4	NA	132725119	132589291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627359_132627602_132683485_132683590_132724869
ES.32124.61	chr7	-	2238	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	2	21	junction_9	280.830118675963	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	NA	False	NA	63	True	AAGAAA	-3	NA	132725060	132589292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724869
ES.32124.62	chr7	-	2551	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	185	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_10	265.033658239855	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	NA	False	NA	63	True	AAGAAA	-3	NA	132724710	132589292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724310
ES.32124.63	chr7	-	2617	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-211	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	NA	False	NA	63	True	AAGAAA	-3	NA	132725796	132589292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
ES.32124.64	chr7	-	3005	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	58	-2	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTAAGTTTCACAAGC	NA	False	NA	62	True	AAGAAA	-2	NA	132726025	132589293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
ES.32124.65	chr7	-	5406	8	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	341.374054224921	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132725152	132589312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132631199_132631359_132683485_132683590_132724869
ES.32124.66	chr7	-	2071	10	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	356.456982323132	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132724457	132589312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724310
ES.32124.67	chr7	-	2712	13	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	368.511749774986	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132725591	132589312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132631199_132631359_132683485_132683590_132724869_132725087_132725386
ES.32124.68	chr7	-	2651	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	379.770330768784	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132724776	132589312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132631199_132631359_132683485_132683590_132724415
ES.32124.69	chr7	-	2032	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	330.945036651029	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132724776	132589312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724715
ES.32124.70	chr7	-	4210	1	NIC	ENSMUSG00000030970.17	novel	3463	10	NA	NA	23453	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	762	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAGAACAAAAGAAA	6101	False	NA	41	True	NA	NA	NA	132593524	132589314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132589300_132593500
ES.32124.71	chr7	-	2221	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	270.834709740092	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAGAACAAAAGAA	6269	False	NA	40	True	NA	NA	NA	132714442	132589315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714349
ES.32124.72	chr7	-	2241	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	271.36388853346	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAGAACAAAAG	6294	False	NA	38	True	AGTAAA	-45	NA	132714417	132589317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714302
ES.32124.75	chr7	-	2209	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	286.458839393492	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAGAACAAAAG	NA	False	NA	38	True	AGTAAA	-45	NA	132725159	132589317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.76	chr7	-	2281	10	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	358.46600472459	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAGAACAAAA	NA	False	NA	37	True	AGTAAA	-44	NA	132725590	132589318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132724869_132725086_132725386
ES.32124.77	chr7	-	2302	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	334.248163361811	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAGAACAAAA	6316	False	NA	37	True	AGTAAA	-44	NA	132714395	132589318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132690005_132690090_132714302
ES.32124.78	chr7	-	2274	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	270.565352549065	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAGAACAAA	NA	False	NA	36	True	AGTAAA	-43	NA	132725096	132589319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593429_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.8	chr7	-	5376	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-133	3057	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_10	265.033658239855	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	NA	False	NA	-12	True	AATAAA	-21	NA	132724477	132586234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724310
ES.32124.80	chr7	-	2180	10	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	332.832438471321	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAGAACAAA	NA	False	NA	36	True	AGTAAA	-43	NA	132725097	132589319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591825_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ES.32124.81	chr7	-	2211	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	1352	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	337.497690892878	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAGAACAAA	8543	False	NA	36	True	AGTAAA	-43	NA	132712168	132589319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132711921
ES.32124.82	chr7	-	2084	10	NIC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	59	-8	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	336.132175648468	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAGAACAA	NA	False	NA	35	True	AGTAAA	-42	NA	132724285	132589320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724164
ES.32124.83	chr7	-	2130	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	-133	-8	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_9	330.050763024174	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGGAAAAGAACAA	NA	False	NA	35	True	AGTAAA	-42	NA	132724477	132589320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724310
ES.32124.84	chr7	-	2323	10	NNC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	119	-9	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_9	329.604514232541	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAAAAGAACA	NA	False	NA	34	True	AGTAAA	-41	NA	132724776	132589321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724415
ES.32124.86	chr7	-	2322	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-5	-13	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	273.218319297956	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAGGAAAAG	NA	False	NA	30	True	AGTAAA	-37	NA	132725590	132589325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132725386
ES.32124.87	chr7	-	2645	9	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	156	junction_7	241.102124368492	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725100	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ES.32124.88	chr7	-	2571	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	331.931611994583	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725095	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132615246_132615498_132627441_132627602_132683485_132683590_132724869
ES.32124.89	chr7	-	2345	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	334.248163361811	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132724324	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132722128_132722220_132724164
ES.32124.9	chr7	-	5349	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-14	3057	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	271.36388853346	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGTGGATAATTTG	6269	False	NA	-12	True	AATAAA	-21	NA	132714442	132586234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132714302
ES.32124.90	chr7	-	2299	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	334.248163361811	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132724950	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132700429_132700554_132724869
ES.32124.91	chr7	-	2433	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	331.567302418465	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725105	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132606654_132606758_132627441_132627602_132683485_132683590_132724869
ES.32124.92	chr7	-	2275	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	272.158207666056	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132724345	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724164
ES.32124.93	chr7	-	3590	11	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	28563	0	intron_retention	FALSE	canonical	0	0	junction_1	329.051728456181	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132684957	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591343_132591472_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485
ES.32124.95	chr7	-	5532	9	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-7	0	intron_retention	FALSE	canonical	2	7	junction_5	351.655371066617	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725103	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593429_132596887_132600681_132600919_132601075_132683485_132683590_132724869
ES.32124.96	chr7	-	2362	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	333.014729279885	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725056	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132599210_132599292_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ES.32124.97	chr7	-	2049	10	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	286.806942423335	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132724774	132589349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132724715
ES.32124.99	chr7	-	2066	12	NNC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	1	-192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	261.929300914743	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGACTAGTCCCTTTGG	NA	False	NA	-3	True	AATAAA	-20	NA	132725095	132589541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132724905_132724966
ES.32125.1	chr7	+	161	1	Intergenic	novelGene_26294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132738626	132738787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132738600_132738800
ES.32126.1	chr7	-	164	1	Intergenic	novelGene_26295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAACTGCAAGAA	NA	False	NA	NA	False	NA	NA	NA	132749972	132749808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_132749800_132750000
ES.32127.1	chr7	+	173	1	Intergenic	novelGene_26296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132751787	132751960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132751800_132752000
ES.32128.1	chr7	+	5914	1	Intergenic	novelGene_26297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTTGTTTGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	132823803	132829717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_132823800_132829700
ES.32129.1	chr7	-	3696	1	Intergenic	novelGene_26298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCGCCAGTGGTTTTGTG	8989	False	NA	NA	False	NA	NA	NA	133177440	133173744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133173700_133177400
ES.3213.1	chr10	+	206	1	Intergenic	novelGene_2522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAAGTTA	5077	False	NA	NA	False	NA	NA	NA	77869702	77869908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77869700_77869900
ES.32130.1	chr7	+	4526	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	120	778	-30	14	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGCATTCTTCACACT	NA	False	NA	20	True	AATAAA	-33	NA	133239391	133273922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.10	chr7	+	5321	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	150	-47	0	47	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTTAGATGTTCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	133239421	133274747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.12	chr7	+	4433	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	40.4052174505004	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239421	133273910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252280_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.13	chr7	+	5905	24	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_20	41.6816179854237	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239422	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133262024_133263511_133263671_133263809_133263962_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.18	chr7	+	4474	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.0306026885251	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239422	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245865_133248704_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
ES.32130.19	chr7	+	4418	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	40.1817917580698	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239422	133273910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261864_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.22	chr7	+	4398	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	36.8589654403557	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239422	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240714_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.23	chr7	+	4503	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	40.5975975958622	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239422	133273910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252359_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.24	chr7	+	6825	24	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	2	-3	intron_retention	FALSE	canonical	3	128	junction_10	21.7514747560774	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTTGTAATTACTTG	NA	False	NA	NA	False	AATAAA	-12	NA	133239423	133274697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133269421_133273094
ES.32130.28	chr7	+	5096	24	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	52.7519429577936	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACTTGTGTTGGTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	133239423	133274708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258696_133258898_133260154_133260374_133261799_133262029_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.38	chr7	+	4448	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	52.2533724323661	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239441	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260362_133261799_133262024_133263511_133263671_133263809_133263962_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.4	chr7	+	6381	23	NIC	ENSMUSG00000039990.17	novel	4380	24	NA	NA	-20	1	intron_retention	FALSE	canonical	3	27	junction_6	37.9098539273549	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGGTAGTTCCCACTTG	NA	False	NA	7	True	AATAAA	-20	NA	133239401	133273909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.40	chr7	+	4537	24	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	21	1	intron_retention	FALSE	canonical	3	140	junction_2	21.5703885805534	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGGTAGTTCCCACTTG	NA	False	NA	7	True	AATAAA	-20	NA	133239442	133273909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.43	chr7	+	4103	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	184	1137	34	-95	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAGGTGTAAGATGCG	NA	False	NA	NA	False	NA	NA	NA	133239455	133273563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.44	chr7	+	5229	25	NNC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	52	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	40.5132865722949	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATATGTTGTAATTACT	NA	False	NA	NA	False	AATAAA	-10	NA	133239473	133274695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256149_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.46	chr7	+	7304	14	NNC	ENSMUSG00000039990.17	novel	4380	24	NA	NA	9218	2	intron_retention	FALSE	canonical	0	0	junction_7	66.4618055550189	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133248807	133273910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133252339_133252752_133253923_133255615_133255688_133255985_133256149_133258223_133258413_133258696_133258898_133260154_133260362_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.47	chr7	+	4261	18	ISM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	9800	-2	-9314	2	3prime_fragment	FALSE	canonical	3	128	junction_3	22.1176470588235	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAATTACTTGTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	133249071	133274702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.5	chr7	+	4323	24	NIC	ENSMUSG00000039990.17	novel	4380	24	NA	NA	-12	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	49.6777897830768	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239409	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261864_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.7	chr7	+	5189	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	-10	-799	-10	7	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTACTTGTGTTGGTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	133239411	133274707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32130.8	chr7	+	4173	23	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	59.8883258260567	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTGGTAGTTCCC	NA	False	NA	2	True	AATAAA	-15	NA	133239421	133273904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133267596_133267713_133269268_133269421_133273097
ES.32130.9	chr7	+	4382	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	0	-2	0	2	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTAGTTCCCACTTGC	NA	False	NA	8	True	AATAAA	-21	NA	133239421	133273910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ES.32131.1	chr7	-	4255	1	Antisense	novelGene_ENSMUSG00000039990.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCAATCAAGAAGTGGAC	NA	False	NA	NA	False	NA	NA	NA	133244688	133240433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_133240400_133244700
ES.32132.1	chr7	+	1256	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	-11	-1	-11	1	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGTGTTCATGTCCA	1296	False	NA	24	True	AATAAA	-25	NA	133311050	133322875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.12	chr7	+	6506	3	FSM	ENSMUSG00000030983.5	ENSMUST00000157077.2	804	3	-6	-5696	-6	-3	multi-exon	FALSE	canonical	3	1578	junction_1	6.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGAAGTGTTCATG	1316	False	NA	20	True	AATAAA	-21	NA	133311070	133322871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133311258_133315916_133315992_133316627
ES.32132.13	chr7	+	1323	7	NNC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	605.484769053323	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAATCATACTTGAA	1317	False	NA	11	True	AATAAA	-12	NA	133311071	133322862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133311258_133315916_133315992_133316627_133316810_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.14	chr7	+	2653	6	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	12	7	-3	-7	intron_retention	FALSE	canonical	3	1578	junction_1	46.2125524073276	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATACTTGAAGTGTT	1319	False	NA	16	True	AATAAA	-17	NA	133311073	133322867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832
ES.32132.15	chr7	+	1019	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	20	205	5	-1	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTGAAAAACTCATTATT	1327	False	NA	NA	False	AAGAAA	-13	NA	133311081	133322669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.16	chr7	+	204	1	Intergenic	novelGene_26300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	5442	False	NA	NA	False	NA	NA	NA	133315196	133315400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_133315200_133315400
ES.32132.17	chr7	+	2924	5	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-556	-7	intron_retention	FALSE	canonical	3	1591	junction_1	40.4189002819226	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATACTTGAAGTGTT	6160	False	NA	16	True	AATAAA	-17	NA	133315914	133322867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133315992_133316627_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.18	chr7	+	2731	2	NIC	ENSMUSG00000030983.5	novel	825	6	NA	NA	-395	-3	intron_retention	FALSE	canonical	3	1685	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGAAGTGTTCATG	8958	False	NA	20	True	AATAAA	-21	NA	133318712	133322871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133321008_133322435
ES.32132.2	chr7	+	1284	7	NNC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	605.484769053323	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATACTTGAAGTGTT	1300	False	NA	16	True	AATAAA	-17	NA	133311054	133322867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_133311258_133315916_133315992_133316627_133316709_133318549_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.3	chr7	+	3122	6	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	1578	junction_1	42.1644399939096	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATACTTGAAGTGTT	1303	False	NA	16	True	AATAAA	-17	NA	133311057	133322867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133311258_133315916_133315992_133316627_133318680_133319327_133319516_133320832_133321008_133322435
ES.32132.7	chr7	+	3763	5	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	1578	junction_1	42.4698422412893	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGAAGTGTTCATGTC	1316	False	NA	22	True	AATAAA	-23	NA	133311070	133322873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133311258_133315916_133315992_133316627_133319516_133320832_133321008_133322435
ES.32133.1	chr7	+	3849	1	Antisense	novelGene_ENSMUSG00000030986.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGCATCCAGTCACTGG	NA	False	NA	NA	False	NA	NA	NA	133330176	133334025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_133330200_133334000
ES.32134.1	chr7	+	1297	11	FSM	ENSMUSG00000053111.14	ENSMUST00000065359.12	2004	11	22	685	-8	8	multi-exon	FALSE	canonical	1	2	junction_1	2.56904651573303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGGTCTCATCACTGG	NA	False	NA	NA	False	AATACA	-22	NA	133378611	133482576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133378700_133454894_133455073_133463831_133463957_133469846_133469929_133471006_133471082_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
ES.32134.2	chr7	+	1968	11	FSM	ENSMUSG00000053111.14	ENSMUST00000065359.12	2004	11	29	7	-1	-7	multi-exon	FALSE	canonical	1	2	junction_1	2.56904651573303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCTCACAGGAGTGG	NA	False	NA	NA	False	AATAAA	-9	NA	133378618	133483254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_133378700_133454894_133455073_133463831_133463957_133469846_133469929_133471006_133471082_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
ES.32134.3	chr7	+	1230	10	NIC	ENSMUSG00000053111.14	novel	515	5	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.14269680527354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGTTCATATGTGGT	NA	False	NA	NA	False	AATACA	-11	NA	133391179	133482565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_133391287_133454894_133455073_133463831_133463957_133469846_133469929_133471750_133471817_133478476_133478643_133481607_133481752_133482000_133482079_133482172_133482218_133482326
ES.32134.4	chr7	+	3898	1	Genic_Genomic	ENSMUSG00000053111.14	novel	NA	NA	NA	NA	-3	-75955	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGACTCCCGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	133391210	133395108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_133391200_133395100
ES.32135.1	chr7	-	2720	9	NIC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-1	1055	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	26.8979553126255	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGCCCTGCAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	133310787	133286916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133288846_133291310_133291410_133292236_133292323_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ES.32135.10	chr7	-	2253	10	NIC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-437	-17	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	18.4477908610847	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133312238	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
ES.32135.11	chr7	-	2853	10	NNC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	3130	-17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	27.5439043468181	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133307557	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292591_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133306399
ES.32135.12	chr7	-	5080	3	ISM	ENSMUSG00000030979.14	ENSMUST00000144789.2	598	6	3327	-579	3327	-17	intron_retention	FALSE	canonical	3	56	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133296482	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_133288846_133291310_133291410_133292236
ES.32135.13	chr7	-	2034	9	FSM	ENSMUSG00000030979.14	ENSMUST00000135760.8	2189	9	16	139	-9	-17	multi-exon	FALSE	canonical	3	35	junction_8	13.9821314541096	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133310807	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133288846_133291310_133291410_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.14	chr7	-	1509	10	NNC	ENSMUSG00000030979.14	novel	1762	10	NA	NA	-1	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	23.0988215187606	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133310787	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299410_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.15	chr7	-	3404	9	NNC	ENSMUSG00000030979.14	novel	2189	9	NA	NA	-385	-17	intron_retention	FALSE	canonical	0	0	junction_2	27.3287280165031	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133312186	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133292121_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
ES.32135.16	chr7	-	1607	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	11	26	-1	-17	multi-exon	FALSE	canonical	3	14	junction_9	18.4477908610847	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133310787	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ES.32135.17	chr7	-	2841	8	NIC	ENSMUSG00000030979.14	novel	2189	9	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	35	junction_7	14.8365241542483	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	False	NA	NA	False	GATAAA	-37	NA	133310787	133288110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133288846_133291310_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.18	chr7	-	1214	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	209	339	-3	257	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGGTGTCTTGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	133310801	133288432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.19	chr7	-	1960	8	NNC	ENSMUSG00000030979.14	novel	512	3	NA	NA	-392	1836	intron_retention	FALSE	canonical	0	0	junction_1	29.0305961048698	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGAAAAGTTCATATG	NA	False	NA	NA	False	AGTAAA	-17	NA	133312193	133292026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133292121_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
ES.32135.2	chr7	-	1782	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	202	-222	-10	100	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAAACATAACTGCAG	NA	False	NA	NA	False	AATACA	-20	NA	133310808	133287871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.20	chr7	-	1719	7	NIC	ENSMUSG00000030979.14	novel	1045	7	NA	NA	-373	8	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	30.5705013952267	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTGTACTTCAAACACA	NA	False	NA	NA	False	AATAAA	-22	NA	133312174	133293854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133294386_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133311457
ES.32135.21	chr7	-	180	1	Intergenic	novelGene_26299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAATTCATCTCTT	NA	False	NA	NA	False	AAAAAG	-31	NA	133299685	133299505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133299500_133299700
ES.32135.23	chr7	-	2984	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	-20	-9	-20	9	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTCTTGGTAATTACA	NA	False	NA	0	True	AATAAA	-28	NA	133378552	133322661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.24	chr7	-	2830	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-15	7	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTCTTGGTAATTA	NA	False	NA	-2	True	AATAAA	-26	NA	133378445	133322663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
ES.32135.25	chr7	-	3097	13	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	132.624993454812	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTTTCTTGGTAATTA	NA	False	NA	-2	True	AATAAA	-26	NA	133378535	133322663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749_133361882_133378330
ES.32135.26	chr7	-	3098	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-171	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	150.629478089189	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGGTTTCTTGGTAAT	NA	False	NA	-4	True	AATAAA	-24	NA	133361729	133322665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133359658_133359912_133361128
ES.32135.27	chr7	-	2935	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	116.100910795753	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378489	133322670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323149_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.28	chr7	-	2753	11	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	122.052283878672	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378524	133322670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133361128_133361643_133378330
ES.32135.29	chr7	-	2825	12	NIC	ENSMUSG00000030986.14	novel	2998	12	NA	NA	132	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	130.335929602909	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133361866	133322670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133361749
ES.32135.3	chr7	-	1927	10	NNC	ENSMUSG00000030979.14	novel	1762	10	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	22.6225060012762	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133310830	133287971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292591_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.30	chr7	-	5526	8	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	46	0	intron_retention	FALSE	canonical	3	247	junction_7	55.0087191604519	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378486	133322670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133327125_133335696_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.31	chr7	-	4320	7	NNC	ENSMUSG00000030986.14	novel	2233	11	NA	NA	-6336	-1	intron_retention	TRUE	non_canonical	0	0	junction_6	151.009565554268	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133338965	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133338533_133338647
ES.32135.33	chr7	-	2872	12	FSM	ENSMUSG00000030986.14	ENSMUST00000063669.8	2644	12	-61	-167	-61	-1	multi-exon	FALSE	canonical	1	2	junction_11	113.27630229292	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133384516	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133384396
ES.32135.35	chr7	-	4072	11	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-50	-1	intron_retention	FALSE	canonical	3	247	junction_10	48.9760145377306	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133378480	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.36	chr7	-	3052	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	43	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	112.442381939366	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133378489	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378189
ES.32135.37	chr7	-	2823	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	7871	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	113.832485305135	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133370367	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133370296
ES.32135.38	chr7	-	2827	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.835144969335	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCAATGGGTTTCTT	NA	False	NA	-10	True	AATAAA	-18	NA	133378456	133322671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327119_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
ES.32135.39	chr7	-	3382	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	150.087467611004	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTCAATGGGTTTCT	NA	False	NA	-11	True	AATAAA	-17	NA	133378503	133322672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326277_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133377870
ES.32135.4	chr7	-	1725	9	NNC	ENSMUSG00000030979.14	novel	1644	10	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.1021906391942	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGGTAGCACACTCATC	NA	False	NA	NA	False	NA	NA	NA	133310787	133288075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292591_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133310652
ES.32135.40	chr7	-	1725	9	NNC	ENSMUSG00000030986.14	novel	2233	11	NA	NA	-11617	1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_8	126.346497774968	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTCTTCAATGGGTTTC	NA	False	NA	-12	True	AATAAA	-16	NA	133344246	133322673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339131_133344157
ES.32135.46	chr7	-	2645	13	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	11	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	112.523207482822	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCCATGCTTTTCT	NA	False	NA	-2	True	AATAAA	-27	NA	133378521	133322833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330_133378367_133378502
ES.32135.48	chr7	-	2652	12	FSM	ENSMUSG00000030986.14	ENSMUST00000063669.8	2644	12	-3	-5	-3	5	multi-exon	FALSE	canonical	1	2	junction_11	113.27630229292	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCCATGCTTTTCT	NA	False	NA	-2	True	AATAAA	-27	NA	133384458	133322833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133384396
ES.32135.49	chr7	-	2705	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	42	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCCATGCTTTTCT	NA	False	NA	-2	True	AATAAA	-27	NA	133378490	133322833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
ES.32135.5	chr7	-	1773	10	NNC	ENSMUSG00000030979.14	novel	1762	10	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	22.6225060012762	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGTATGGTAGCACAC	NA	False	NA	NA	False	NA	NA	NA	133310785	133288080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292591_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ES.32135.50	chr7	-	2716	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	123	159	123	5	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTATTCCATGCTTTTCT	NA	False	NA	-2	True	AATAAA	-27	NA	133361875	133322833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
ES.32135.51	chr7	-	2829	11	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	41	1	intron_retention	FALSE	canonical	3	247	junction_10	49.6241876507817	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACTATTCCATGCTT	NA	False	NA	-6	True	AATAAA	-23	NA	133378491	133322837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.52	chr7	-	2820	13	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	144.128896786484	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACTATTCCATGCTT	NA	False	NA	-6	True	AATAAA	-23	NA	133378510	133322837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133370429_133370484_133378330
ES.32135.53	chr7	-	2677	12	NIC	ENSMUSG00000030986.14	novel	2998	12	NA	NA	108	-4	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	130.335929602909	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTAAAATTACTATTCCA	NA	False	NA	-11	True	AATAAA	-18	NA	133361890	133322842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133361749
ES.32135.55	chr7	-	2783	12	NNC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	117.033088490618	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCTTAAAATTACTAT	NA	False	NA	-15	True	AATAAA	-14	NA	133378537	133322846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344526_133350567_133350766_133361128_133361643_133378330
ES.32135.56	chr7	-	5660	1	FSM	ENSMUSG00000081431.2	ENSMUST00000120338.2	456	1	-5152	-52	-5152	52	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAGCTAAAGACAAGGAG	NA	False	NA	NA	False	AATAAA	-27	NA	133345815	133340155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133340200_133345800
ES.32135.57	chr7	-	4020	2	FSM	ENSMUSG00000030986.14	ENSMUST00000146211.2	546	2	-495	-2979	-138	-2927	multi-exon	FALSE	canonical	3	376	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	133361696	133347313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_133350766_133361128
ES.32135.58	chr7	-	149	1	Intergenic	novelGene_26301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	133347712	133347563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133347600_133347700
ES.32135.6	chr7	-	4502	19	Fusion	ENSMUSG00000030979.14_ENSMUSG00000030986.14	novel	1644	10	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_8	160.85586102064	427	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133378544	133288084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_133288846_133291310_133291410_133292236_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ES.32135.7	chr7	-	2294	11	NNC	ENSMUSG00000030979.14	novel	1762	10	NA	NA	-355	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.9647444783681	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTGATCTGAGTATGG	NA	False	NA	NA	False	NA	NA	NA	133312156	133288088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737_133310839_133311457
ES.32135.8	chr7	-	1608	11	NNC	ENSMUSG00000030979.14	novel	1762	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	25.9470614906582	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAGGACTGATCTGAG	NA	False	NA	NA	False	NA	NA	NA	133310787	133288093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133306399_133306469_133310737
ES.32135.9	chr7	-	5555	23	Fusion	ENSMUSG00000030979.14_ENSMUSG00000030986.14	novel	2955	12	NA	NA	8	0	multi-exon	FALSE	canonical	0	0	junction_10	174.445479180779	427	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAGGACTGATCTGAG	NA	False	NA	NA	False	NA	NA	NA	133378524	133288093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_133288846_133291310_133291410_133292236_133292323_133292591_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133306399_133306469_133321897_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133370429_133370484_133378330
ES.32136.1	chr7	-	176	1	Intergenic	novelGene_26302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	133427539	133427363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133427400_133427500
ES.32137.1	chr7	-	4076	1	Intergenic	novelGene_26303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTCTGGGGGTTAAG	NA	False	NA	NA	False	NA	NA	NA	133620560	133616484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133616500_133620600
ES.32137.2	chr7	-	3512	1	Intergenic	novelGene_26304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133620558	133617046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_133617000_133620600
ES.32138.1	chr7	+	1074	1	Intergenic	novelGene_26305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGTCTTTTGCAGCA	NA	False	NA	NA	False	AATAAA	-10	NA	133651543	133652617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_133651500_133652600
ES.32139.1	chr7	-	156	1	Intergenic	novelGene_26306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAGTAAACAAAT	5623	False	NA	NA	False	NA	NA	NA	134226541	134226385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_134226400_134226500
ES.3214.1	chr10	+	174	1	Intergenic	novelGene_2523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGTCATACTAGC	1732	False	NA	NA	False	NA	NA	NA	77876307	77876481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_77876300_77876500
ES.32140.1	chr7	+	6860	52	NNC	ENSMUSG00000058325.7	novel	411	4	NA	NA	-1529	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3334834332006	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTGGCTGGCCTCTT	NA	False	NA	10	True	AATAAA	-17	NA	134270853	134775376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134271057_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.10	chr7	+	6808	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	24.5407647588272	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGTGGCTGGCCT	NA	False	NA	7	True	AATAAA	-14	NA	134272411	134775373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739814_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.11	chr7	+	6752	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	37.2632188858906	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134272413	134775374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747146_134747320_134748168_134748253_134753937_134754076_134760218_134760324_134765006_134765188_134768828_134768983_134770091_134770244_134774175
ES.32140.14	chr7	+	2482	21	NNC	ENSMUSG00000058325.7	novel	3800	30	NA	NA	0	-102	intron_retention	FALSE	canonical	0	0	junction_12	36.2207123066347	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTATCTTTGAAAATTT	NA	False	NA	-98	True	AATAAA	-23	NA	134272419	134384810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358688_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
ES.32140.18	chr7	+	6894	53	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.4530013740676	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134272422	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134354313_134354408_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.19	chr7	+	5918	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	3	40673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_51	24.5214403749511	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCACAGCTTCTGTTTA	NA	False	NA	NA	False	AAGAAA	-17	NA	134272422	134816041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134815730
ES.32140.2	chr7	+	7012	52	NNC	ENSMUSG00000058325.7	novel	411	4	NA	NA	-956	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.3334834332006	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134271426	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134271790_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.20	chr7	+	6788	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3334834332006	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134272423	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272563_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.21	chr7	+	3000	27	FSM	ENSMUSG00000058325.7	ENSMUST00000211570.2	3557	27	48	509	11	-509	multi-exon	FALSE	canonical	3	101	junction_11	21.2171430631769	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTCTGTTCTGAATTC	NA	False	NA	NA	False	NA	NA	NA	134272430	134478163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948
ES.32140.24	chr7	+	5920	28	ISM	ENSMUSG00000058325.7	ENSMUST00000210617.2	3800	30	12	30366	12	-30366	5prime_fragment	FALSE	canonical	3	101	junction_11	20.8696391472021	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATTTTATGTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	134272431	134595290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250
ES.32140.25	chr7	+	6796	53	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	12	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	33.6192569499955	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGTGGCTGGCCT	NA	False	NA	7	True	AATAAA	-14	NA	134272431	134775373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715609_134715746_134715757_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747319_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.27	chr7	+	5213	37	NIC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	27.8494076449184	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134272434	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.29	chr7	+	2410	22	NIC	ENSMUSG00000058325.7	novel	3557	27	NA	NA	15	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	35.1926347685153	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGGATGTGTTTCTG	NA	False	NA	1	True	NA	NA	NA	134272434	134384909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134384730
ES.32140.3	chr7	+	2656	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	-49	-18	-16	18	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTTGGGTTTTTCTT	NA	False	NA	25	True	NA	NA	NA	134272366	134384933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
ES.32140.31	chr7	+	6700	53	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_48	24.320187574701	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134272436	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760235_134760320_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.32	chr7	+	4347	35	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	21	64133	17	-64133	5prime_fragment	FALSE	canonical	3	101	junction_11	18.9351698550461	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134272436	134711235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434
ES.32140.34	chr7	+	6784	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	19	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_51	24.5214403749511	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134272438	134775374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774181
ES.32140.35	chr7	+	2513	1	Intergenic	novelGene_26307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGAGGAAGTTGGGCG	NA	False	NA	NA	False	NA	NA	NA	134274859	134277372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_134274900_134277400
ES.32140.36	chr7	+	6872	52	NNC	ENSMUSG00000058325.7	novel	411	4	NA	NA	25451	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.1390627060697	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTGGCTGGCCTCTT	NA	False	NA	10	True	AATAAA	-17	NA	134298301	134775376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134298517_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.39	chr7	+	6475	48	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	66942	-6	-39826	6	3prime_fragment	FALSE	canonical	3	98	junction_38	14.5769993142828	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134339357	134775374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.4	chr7	+	6864	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	-48	-9	-15	9	multi-exon	FALSE	canonical	3	98	junction_42	17.5348283073368	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGGCTGGCCTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	134272367	134775377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.40	chr7	+	6296	47	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	-36476	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_44	21.3201028700476	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134342707	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768910_134768983_134770091_134770244_134774175
ES.32140.42	chr7	+	3340	4	ISM	ENSMUSG00000058325.7	ENSMUST00000210464.2	2713	19	94129	2814	-12204	-2814	internal_fragment	FALSE	canonical	3	108	junction_3	4.49691252107735	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-37	NA	134366979	134377115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134367048_134367919_134367993_134373195_134373300_134374020
ES.32140.43	chr7	+	5216	36	NNC	ENSMUSG00000058325.7	novel	411	4	NA	NA	-5606	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.7129775887055	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGTGGCTGGCCT	NA	False	NA	7	True	AATAAA	-14	NA	134373577	134775373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134373759_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.44	chr7	+	5435	35	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	101206	-6	-5562	6	3prime_fragment	FALSE	canonical	3	98	junction_25	12.1753338486162	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134373621	134775374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.45	chr7	+	4314	29	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	177453	1	70685	-1	3prime_fragment	FALSE	canonical	3	98	junction_19	12.1203046873536	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGACTCCTGGTGGC	NA	False	NA	1	True	AATAAA	-8	NA	134449868	134775367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.46	chr7	+	4146	1	Antisense	novelGene_ENSMUSG00000073805.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGGGCTTTCTGCCGC	NA	False	NA	NA	False	NA	NA	NA	134481060	134485206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_134481100_134485200
ES.32140.47	chr7	+	7735	1	Antisense	novelGene_ENSMUSG00000109608.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGGCTGGAGCGAGCA	NA	False	NA	NA	False	NA	NA	NA	134507385	134515120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_134507400_134515100
ES.32140.48	chr7	+	5596	1	NIC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	209199	-31678	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGTATTGGTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	134588382	134593978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_134588400_134594000
ES.32140.49	chr7	+	2488	1	NIC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	358391	-35306	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1636	False	NA	NA	False	NA	NA	NA	134737574	134740062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_134737600_134740100
ES.32140.5	chr7	+	6759	51	NIC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	-15	6	combination_of_known_splicesites	TRUE	canonical	0	0	junction_27	24.7571323056609	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTGGTGGCTGGCCTC	NA	False	NA	8	True	AATAAA	-15	NA	134272367	134775374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.50	chr7	+	2417	10	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	469618	0	362850	0	3prime_fragment	FALSE	canonical	3	105	junction_2	14.6515073172239	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	6095	False	NA	2	True	AATAAA	-9	NA	134742033	134775368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.51	chr7	+	1404	9	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	473132	863	366364	-863	3prime_fragment	FALSE	canonical	3	105	junction_1	15.2479506819769	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGCCTTTCTGATAG	9609	False	NA	NA	False	NA	NA	NA	134745547	134774505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.52	chr7	+	1994	6	ISM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	481519	-9	374751	9	3prime_fragment	FALSE	canonical	3	111	junction_4	13.6323145503616	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGGCTGGCCTCTTT	NA	False	NA	11	True	AATAAA	-18	NA	134753934	134775377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.6	chr7	+	2591	21	NNC	ENSMUSG00000058325.7	novel	2589	21	NA	NA	-5	-96	intron_retention	TRUE	canonical	1	1	junction_11	35.7509090793507	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAAAATTTCTGCTT	NA	False	NA	-92	True	AATAAA	-29	NA	134272377	134384816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358542_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
ES.32140.8	chr7	+	6907	52	NNC	ENSMUSG00000058325.7	novel	6807	52	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	24.2862748264169	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGGTGGCTGGCCTCT	NA	False	NA	9	True	AATAAA	-16	NA	134272385	134775375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358542_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ES.32140.9	chr7	+	4646	28	ISM	ENSMUSG00000058325.7	ENSMUST00000210617.2	3800	30	-26	31678	11	-31678	5prime_fragment	FALSE	canonical	3	101	junction_11	20.8696391472021	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGTATTGGTACAGAGA	NA	False	NA	NA	False	NA	NA	NA	134272393	134593978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250
ES.32141.1	chr7	-	184	1	Intergenic	novelGene_26308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	134303477	134303293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_134303300_134303500
ES.32142.1	chr7	-	4045	1	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCCCAACTT	NA	False	NA	NA	False	AAGAAA	-38	NA	134327501	134323456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134323500_134327500
ES.32143.1	chr7	-	6918	1	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAATGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	134344532	134337614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134337600_134344500
ES.32144.1	chr7	-	5448	3	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAAGTAT	NA	False	NA	NA	False	NA	NA	NA	134454629	134402406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134406378_134449868_134449940_134453223
ES.32144.2	chr7	-	4976	1	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTATTACAGAAAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	134454629	134449653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134449700_134454600
ES.32144.3	chr7	-	1667	2	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134454629	134449678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134449940_134453223
ES.32145.1	chr7	-	4499	4	FSM	ENSMUSG00000073805.6	ENSMUST00000171394.3	2490	4	141	-2150	-11	21	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTGTGGCTACCAAA	NA	False	NA	NA	False	AATAAA	-15	NA	134540018	134483633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_134486321_134500874_134500947_134519371_134520534_134539440
ES.32145.2	chr7	-	3350	3	FSM	ENSMUSG00000073805.6	ENSMUST00000210055.2	3332	3	0	-18	0	18	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATTTGTGTGGCTACC	NA	False	NA	NA	False	AATAAA	-12	NA	134540034	134483636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_134486321_134500874_134500947_134539440
ES.32146.1	chr7	-	3287	1	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGTGATTAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	134776147	134772860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_134772900_134776100
ES.32147.1	chr7	-	10290	14	FSM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-213	-16	-213	16	multi-exon	FALSE	canonical	3	124	junction_9	63.2390037685062	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGCAGCTGCTCCCCT	NA	False	NA	-2	True	AATAAA	-35	NA	135318303	135291496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.11	chr7	-	10149	14	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-92	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.836796043987	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTTTGGCCTCTCTG	NA	False	NA	-22	True	AATAAA	-15	NA	135318182	135291516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295218_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306267_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315481_135315602_135315689_135315769_135317776
ES.32147.12	chr7	-	4152	4	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	13116	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	150.964307775786	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCTTTGGCCTCTCTG	NA	False	NA	-22	True	AATAAA	-15	NA	135299524	135291516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135295960_135297172_135297346
ES.32147.13	chr7	-	10032	14	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-102	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	78.5557503761486	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCCTTTGGCCTCTCT	NA	False	NA	-23	True	AATAAA	-14	NA	135318192	135291517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309215_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.14	chr7	-	10218	13	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-82	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	81.4170931411553	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCCTTTGGCCTCTCT	NA	False	NA	-23	True	AATAAA	-14	NA	135318172	135291517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306072_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.18	chr7	-	8703	9	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	8550	227	3100	-227	3prime_fragment	FALSE	canonical	3	141	junction_6	71.8083386522763	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGTGTGGTTTTCACC	NA	False	NA	NA	False	AGTAAA	-17	NA	135309540	135291739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089
ES.32147.19	chr7	-	5079	12	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-58	8721	-58	6131	5prime_fragment	FALSE	canonical	3	124	junction_7	16.2078442390107	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGCCCAAGATCATCT	NA	False	NA	NA	False	NA	NA	NA	135318148	135300233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.20	chr7	-	3449	11	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-104	5415	combination_of_known_splicesites	FALSE	canonical	3	19	junction_6	42.2517455260726	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCCGGCAAGCACAAA	NA	False	NA	NA	False	NA	NA	NA	135318194	135300949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.21	chr7	-	2858	12	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-152	11036	-152	3816	5prime_fragment	FALSE	canonical	3	124	junction_7	16.2078442390107	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAAAACAGAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	135318242	135302548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.22	chr7	-	1534	4	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	10613	13433	5163	1419	internal_fragment	FALSE	canonical	3	141	junction_2	16.3571255285137	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	135307477	135304945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135305969_135306067_135306187_135306271_135306525_135307338
ES.32147.23	chr7	-	1790	6	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	-122	17491	-122	-2639	5prime_fragment	FALSE	canonical	3	124	junction_1	13.6586968631711	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTGTGTGCTAAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	135318212	135309003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.3	chr7	-	9234	13	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	77.8015191939649	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318223	135291512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.4	chr7	-	9124	13	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	81.1036716527406	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318179	135291512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135296026_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.5	chr7	-	10999	13	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-104	0	intron_retention	FALSE	canonical	3	124	junction_8	65.4070056560373	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318194	135291512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_135291863_135294808_135295226_135295960_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ES.32147.6	chr7	-	3770	4	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	11550	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	150.964307775786	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135301090	135291512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135295960_135298894_135301020
ES.32147.7	chr7	-	4935	2	ISM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	18696	1	13246	-1	intron_retention	FALSE	canonical	3	346	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGGCCTCTCTGACA	NA	False	NA	-19	True	AATAAA	-18	NA	135299394	135291513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_135291863_135294808
ES.32147.8	chr7	-	5712	4	NNC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	11383	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	150.964307775786	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGGCCTCTCTGACA	NA	False	NA	-19	True	AATAAA	-18	NA	135301257	135291513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_135291863_135294808_135295226_135295960_135298421_135298771
ES.32148.1	chr7	+	195	1	Intergenic	novelGene_26309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTGAAT	7715	False	NA	NA	False	NA	NA	NA	135404061	135404256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_135404100_135404300
ES.32149.1	chr7	-	212	1	Intergenic	novelGene_26310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTATTCCCCG	NA	False	NA	NA	False	NA	NA	NA	135754907	135754695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_135754700_135754900
ES.3215.1	chr10	-	1565	8	NNC	ENSMUSG00000000731.16	novel	1926	14	NA	NA	-14	535	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	7.19977323905952	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCCACTGTACATCTAT	NA	False	NA	NA	False	TTTAAA	-4	NA	77874108	77865320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77870542_77871490_77871668_77872518_77872619_77873706_77873823_77874074
ES.3215.2	chr10	-	2377	13	NNC	ENSMUSG00000000731.16	novel	1938	14	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_4	7.3649884966343	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGTGGATGTTTGTT	NA	False	NA	-1	True	ATTAAA	-24	NA	77879364	77865856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77870803_77871490_77871668_77872518_77872619_77873706_77873823_77875495_77875577_77875764_77875914_77877333_77877448_77877894_77877970_77878350_77878911_77879222
ES.3215.3	chr10	-	1988	7	NNC	ENSMUSG00000000731.16	novel	2966	14	NA	NA	-31	-4	intron_retention	FALSE	canonical	1	3	junction_6	5.75663867972351	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACACCTGGTGGATGTT	NA	False	NA	-5	True	ATTAAA	-20	NA	77874125	77865860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77871668_77872518_77872619_77873706_77873820_77874074
ES.3215.5	chr10	-	1929	15	NIC	ENSMUSG00000000731.16	novel	1938	14	NA	NA	43	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	7.25061573739973	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGGTACACCTGGTG	NA	False	NA	-11	True	ATTAAA	-14	NA	77879363	77865866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77870542_77871490_77871668_77872518_77872619_77873706_77873823_77875495_77875577_77875764_77875914_77877333_77877448_77877894_77877970_77878350_77878507_77878735_77878911_77879050_77879104_77879222
ES.3215.6	chr10	-	3139	5	NIC	ENSMUSG00000000731.16	novel	1712	13	NA	NA	-83	-3	intron_retention	FALSE	canonical	2	13	junction_4	2.58602010819715	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGGTACACCTGGT	NA	False	NA	-12	True	ATTAAA	-13	NA	77874177	77865867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77872619_77873706
ES.3215.7	chr10	-	1246	1	NIC	ENSMUSG00000000731.16	novel	1926	14	NA	NA	-33	-784	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77874127	77872881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77872900_77874100
ES.32150.1	chr7	-	1194	5	NNC	ENSMUSG00000110101.2	novel	3314	6	NA	NA	21676	19701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAATTAAAAAAAAATCAATA	NA	False	NA	NA	False	NA	NA	NA	136290657	136249982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_136250786_136255935_136256027_136263137_136263216_136287402_136287520_136290552
ES.32151.1	chr7	+	863	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	-43	2074	-43	-2074	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTGCCCTTTCTTGT	NA	False	NA	37	True	ATTAAA	-28	NA	136496299	136729921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ES.32151.10	chr7	+	2742	1	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	230831	-2080	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGATGTGGCTGCCCTT	NA	False	NA	31	True	ATTAAA	-22	NA	136727173	136729915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_136727200_136729900
ES.32151.2	chr7	+	917	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-27	-2081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.089495283151	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGATGTGGCTGCCCT	NA	False	NA	30	True	ATTAAA	-21	NA	136496315	136729914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_136496417_136541003_136541081_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ES.32151.3	chr7	+	996	6	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-25	-2080	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	98.1150345258055	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGATGTGGCTGCCCTT	NA	False	NA	31	True	ATTAAA	-22	NA	136496317	136729915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_136496417_136521584_136521742_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ES.32151.4	chr7	+	678	4	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-19	-2074	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	91.8634251968045	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTGCCCTTTCTTGT	NA	False	NA	37	True	ATTAAA	-28	NA	136496323	136729921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_136496417_136552996_136553134_136723217_136723358_136729613
ES.32151.5	chr7	+	2683	2	NNC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	-19	-232723	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAATACTTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	136496323	136499272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_136498220_136498485
ES.32151.6	chr7	+	2885	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	13	-4	13	4	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGCTGTGTTCTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	136496355	136731999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ES.32151.7	chr7	+	5579	1	Intergenic	novelGene_26311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGGCAGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	136628294	136633873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_136628300_136633900
ES.32151.8	chr7	+	2276	1	Intergenic	novelGene_26312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	136640534	136642810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_136640500_136642800
ES.32151.9	chr7	+	6511	1	NIC	ENSMUSG00000054612.5	novel	2894	5	NA	NA	228059	-1083	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTTTATTATGTCCTC	NA	False	NA	NA	False	CATAAA	-22	NA	136724401	136730912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_136724400_136730900
ES.32152.1	chr7	-	4710	1	Intergenic	novelGene_26313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136665565	136660855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_136660900_136665600
ES.32153.1	chr7	-	6256	1	Antisense	novelGene_ENSMUSG00000054612.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGAGTTAGTGCGGC	NA	False	NA	NA	False	NA	NA	NA	136737220	136730964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_136731000_136737200
ES.32154.1	chr7	+	3038	4	Intergenic	novelGene_26314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCCCTCAAACTAGATAA	NA	False	NA	NA	False	AATAAA	-18	NA	136747898	136753614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_136748492_136750654_136751531_136751913_136752743_136752874
ES.32155.1	chr7	-	1162	5	NNC	ENSMUSG00000010476.15	novel	4994	16	NA	NA	15	-12056	intron_retention	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	136916159	136912495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_136912730_136914077_136914134_136914821_136914886_136915246_136915404_136915508
ES.32156.1	chr7	+	1562	1	Intergenic	novelGene_26315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACTAGAGTAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	136991006	136992568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_136991000_136992600
ES.32157.1	chr7	+	175	1	Intergenic	novelGene_26316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAACAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	137009824	137009999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_137009800_137010000
ES.32158.1	chr7	-	879	2	FSM	ENSMUSG00000040139.15	ENSMUST00000145881.8	895	2	18	-2	-3	2	multi-exon	FALSE	canonical	2	10	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCTGGCTTGGTGTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	137012467	136977300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_136978081_137012368
ES.32158.2	chr7	-	1236	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.717489092392	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCTGGCTTGGTGTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	137012473	136977300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_136978081_136989099_136989163_136989268_136989431_137008309_137008436_137012368
ES.32158.3	chr7	-	3005	1	Genic_Genomic	ENSMUSG00000040139.15	novel	NA	NA	NA	NA	32156	2	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCTGGCTTGGTGTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	136980305	136977300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_136977300_136980300
ES.32158.4	chr7	-	1404	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	-277	-1	-277	1	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTCTGGCTTGGTGTG	NA	False	NA	-6	True	ATTAAA	-15	NA	137012768	136977301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
ES.32158.5	chr7	-	1591	5	NNC	ENSMUSG00000040139.15	novel	699	5	NA	NA	-280	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	92.2506775042872	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012771	136977302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_136978081_136978661_136978847_136989099_136989163_136989268_136989431_137012368
ES.32158.6	chr7	-	1177	5	NNC	ENSMUSG00000040139.15	novel	1126	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	104.760142707043	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012482	136977302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_136978081_136989099_136989163_136989268_136989431_136990647_136990708_137012368
ES.32158.7	chr7	-	1277	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-15	-563	6	0	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012479	136977302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
ES.32158.8	chr7	-	4273	2	ISM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	30285	-562	30282	-1	3prime_fragment	FALSE	canonical	3	25	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTCTGGCTTGGTG	NA	False	NA	-8	True	ATTAAA	-13	NA	136982179	136977303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_136978081_136978683
ES.32159.1	chr7	-	179	1	Intergenic	novelGene_26317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	137037921	137037742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_137037700_137037900
ES.3216.2	chr10	+	1660	13	FSM	ENSMUSG00000000730.14	ENSMUST00000000746.12	1676	13	14	2	14	-2	multi-exon	FALSE	canonical	2	8	junction_8	3.51484945149386	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTTCTGGTGTGGTGTG	5605	False	NA	27	True	AATATA	-19	NA	77885689	77899454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77885746_77885849_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
ES.32160.1	chr7	+	1394	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	-59	350	-59	-350	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATCGCTGTCACTAAT	NA	False	NA	91	True	NA	NA	NA	137039283	137069973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.10	chr7	+	2127	10	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-10	-412	intron_retention	FALSE	canonical	3	38	junction_2	1160.47478576446	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039373	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137046707_137046817_137054181_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.11	chr7	+	1143	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-6	-412	at_least_one_novel_splicesite	FALSE	canonical	3	234	junction_3	1056.66335225558	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039377	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055236_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.12	chr7	+	4751	11	NIC	ENSMUSG00000031068.9	novel	3440	10	NA	NA	0	-407	intron_retention	FALSE	canonical	3	26	junction_3	1455.98854734507	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039383	137069916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143
ES.32160.14	chr7	+	1174	10	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	4	-412	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1150.78350121414	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039388	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137065826_137065867_137066143_137066237_137069661
ES.32160.15	chr7	+	1315	12	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	4	-413	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	1404.19735021368	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGATTGCGTGTAGA	NA	False	NA	28	True	AATAAA	-16	NA	137039388	137069910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.16	chr7	+	6740	10	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	4	-407	intron_retention	FALSE	canonical	3	3350	junction_5	226.740401950211	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039388	137069916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.17	chr7	+	1219	12	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-3	-412	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	1597.98519837165	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039390	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055236_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.18	chr7	+	2451	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-3	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1125.67657877385	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGATTGCGTGTAGA	NA	False	NA	28	True	AATAAA	-16	NA	137039390	137069910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137059624_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.20	chr7	+	1293	12	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-2	-412	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	1422.33254471962	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039391	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137068413_137068483_137069661
ES.32160.21	chr7	+	4654	10	FSM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	8	-1222	-2	-407	multi-exon	FALSE	canonical	3	3305	junction_4	256.328974581253	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCGTGTAGAATGTCT	NA	False	NA	34	True	AATAAA	-22	NA	137039391	137069916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143
ES.32160.24	chr7	+	229	1	Intergenic	novelGene_26318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	612	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAAGGCTTTTCAGGG	NA	False	NA	NA	False	ACTAAA	-26	NA	137040951	137041180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_137041000_137041200
ES.32160.25	chr7	+	6319	9	ISM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	9770	412	9695	-412	3prime_fragment	FALSE	canonical	3	3305	junction_2	254.055112131207	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137049112	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.26	chr7	+	3588	10	NNC	ENSMUSG00000031068.9	novel	817	7	NA	NA	12176	-412	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	1473.95719153208	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137051593	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137054271_137054425_137054501_137055236_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.4	chr7	+	1713	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	-28	0	-28	0	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGTTCCAGTAAGCTT	NA	False	NA	NA	False	TTTAAA	-17	NA	137039314	137070323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.6	chr7	+	911	8	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-24	-412	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	1304.68336920402	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039318	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_137039501_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.7	chr7	+	1168	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-24	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1125.67657877385	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGATTGCGTGTAGA	NA	False	NA	28	True	AATAAA	-16	NA	137039318	137069910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060979_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.8	chr7	+	1282	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	-16	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1112.995637907	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039326	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054432_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32160.9	chr7	+	1182	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	19	-412	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	1110.36804709069	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039361	137069911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060923_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ES.32161.1	chr7	-	207	1	Intergenic	novelGene_26319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCCTCTGAGCCCCAG	NA	False	NA	NA	False	AAGAAA	-9	NA	137097887	137097680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_137097700_137097900
ES.32162.1	chr7	+	345	1	Intergenic	novelGene_26320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	137248302	137248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_137248300_137248600
ES.32163.1	chr7	-	1820	4	Intergenic	novelGene_26321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCGAGAGCAGTTTCT	NA	False	NA	NA	False	AATAAA	-44	NA	137255751	137253223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_137254762_137254966_137255039_137255428_137255593_137255705
ES.32164.1	chr7	+	168	1	Intergenic	novelGene_26322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138355708	138355876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138355700_138355900
ES.32165.1	chr7	+	177	1	Intergenic	novelGene_26323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAGAAGAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	138394411	138394588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138394400_138394600
ES.32166.1	chr7	+	174	1	Intergenic	novelGene_26324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAGGAGATAGT	NA	False	NA	NA	False	NA	NA	NA	138401575	138401749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138401600_138401700
ES.32167.1	chr7	+	174	1	Intergenic	novelGene_26325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGAAAATAGACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	138439594	138439768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138439600_138439800
ES.32168.1	chr7	+	1934	10	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	1	-326	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	206.009169159476	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138447808	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.10	chr7	+	3804	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	549	junction_1	84.2054366151946	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448080	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.12	chr7	+	5527	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	482	junction_4	92.5538882069372	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448080	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138476014_138478184_138478447_138483937
ES.32168.13	chr7	+	4253	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	482	junction_4	91.6855762808916	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCCACTGCAGTCTT	NA	False	NA	15	True	AATAAA	-29	NA	138448081	138484781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138478447_138483937
ES.32168.14	chr7	+	1574	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	272.736209550547	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAATGCCACTGCAG	NA	False	NA	11	True	AATAAA	-25	NA	138448081	138484777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.15	chr7	+	3155	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	482	junction_4	87.0195849407782	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448081	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.16	chr7	+	4334	7	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	-3073	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	270.009516293202	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACCTGAAACATCAAC	NA	False	NA	NA	False	ATTAAA	-12	NA	138448081	138481710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476012_138478184
ES.32168.17	chr7	+	2989	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	74	junction_3	219.129654669457	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448081	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.18	chr7	+	6914	5	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-6	-325	intron_retention	FALSE	canonical	3	549	junction_1	88.6464184273679	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448081	138484458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138476014_138478184_138478447_138483937
ES.32168.19	chr7	+	1788	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	277.570068373992	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448084	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.2	chr7	+	2223	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	-285	0	-49	0	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448038	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.20	chr7	+	1554	5	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	277.472859033095	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCCACTGCAGTCTT	NA	False	NA	15	True	AATAAA	-29	NA	138448085	138484781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138475817_138476014_138478184_138478447_138483937
ES.32168.21	chr7	+	2064	11	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	290.25438842505	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCCACTGCAGTCTT	NA	False	NA	15	True	AATAAA	-29	NA	138448086	138484781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138448911_138448996_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.23	chr7	+	1809	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	254.733466370025	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448092	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.24	chr7	+	3463	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	5	-326	intron_retention	FALSE	canonical	3	549	junction_1	84.2054366151946	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448092	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.25	chr7	+	5182	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	8	-327	intron_retention	FALSE	canonical	3	482	junction_4	92.5538882069372	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTAAGTCTGAGCC	NA	False	NA	21	True	AATAAA	-17	NA	138448095	138484456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138476014_138478184_138478447_138483937
ES.32168.26	chr7	+	1834	10	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	9	-332	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	264.422641491483	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTTATTTAAGTCT	NA	False	NA	16	True	AATAAA	-12	NA	138448096	138484451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138466749_138466847_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.27	chr7	+	4440	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	482	junction_4	93.3256313634564	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448096	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.28	chr7	+	2645	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	9	-326	intron_retention	FALSE	canonical	3	74	junction_3	219.129654669457	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448096	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.29	chr7	+	651	3	FSM	ENSMUSG00000041769.14	ENSMUST00000128157.2	3823	3	290	2882	10	-964	multi-exon	FALSE	canonical	3	549	junction_1	7	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATTTGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	138448097	138470549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138448245_138448340_138448434_138470138
ES.32168.3	chr7	+	1985	9	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	209.072318528781	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448053	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.30	chr7	+	1215	5	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	13	-326	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	277.472859033095	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448100	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138475817_138476014_138478184_138478447_138483937
ES.32168.31	chr7	+	6155	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	13	0	intron_retention	FALSE	canonical	3	549	junction_1	84.3222390594557	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448100	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.32	chr7	+	1877	8	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	275.146565766431	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAATGCCACTGCAGTCT	NA	False	NA	14	True	AATAAA	-28	NA	138448102	138484780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475865_138476014_138478184_138478447_138483937
ES.32168.33	chr7	+	12712	4	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	549	junction_1	58.7329171381395	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448102	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138476014_138478184
ES.32168.35	chr7	+	3864	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_2	296.718584465731	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448114	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138466749_138466847_138470138_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.36	chr7	+	2126	10	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	16	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	264.422641491483	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAATGCCACTGCAG	NA	False	NA	11	True	AATAAA	-25	NA	138448130	138484777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138466749_138466847_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.37	chr7	+	1201	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	19	-327	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	272.736209550547	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTAAGTCTGAGCC	NA	False	NA	21	True	AATAAA	-17	NA	138448133	138484456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.38	chr7	+	2771	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	21	-327	intron_retention	FALSE	canonical	3	482	junction_4	87.0195849407782	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTAAGTCTGAGCC	NA	False	NA	21	True	AATAAA	-17	NA	138448135	138484456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.39	chr7	+	7196	8	ISM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	48	328	21	-325	intron_retention	FALSE	canonical	3	482	junction_4	73.2839041826027	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448135	138484458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184
ES.32168.4	chr7	+	1999	10	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	206.009169159476	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCCACTGCAGTCTT	NA	False	NA	15	True	AATAAA	-29	NA	138448067	138484781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.40	chr7	+	1410	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	22	-326	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	277.570068373992	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448136	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.41	chr7	+	1555	7	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	315.883769060007	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448136	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.42	chr7	+	1326	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	22	-326	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	269.648215273159	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448136	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.43	chr7	+	2973	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	22	0	intron_retention	FALSE	canonical	3	46	junction_5	213.661185152606	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448136	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474729_138476014_138478184_138478447_138483937
ES.32168.44	chr7	+	4598	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	33	-325	intron_retention	FALSE	canonical	3	549	junction_1	80.2200099725748	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448147	138484458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.45	chr7	+	4797	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	41	0	intron_retention	FALSE	canonical	3	549	junction_1	85.0961808778749	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448155	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.46	chr7	+	360	4	NNC	ENSMUSG00000041769.14	novel	623	5	NA	NA	58	-964	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	261.691930839808	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATTTGTGTTAA	NA	False	NA	NA	False	NA	NA	NA	138448172	138470549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138470452
ES.32168.47	chr7	+	1648	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	-37	327	-29	-327	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTAAGTCTGAGCC	NA	False	NA	21	True	AATAAA	-17	NA	138448286	138484456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.48	chr7	+	1558	6	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	275.556164873878	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448297	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138470138_138470237_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.49	chr7	+	1351	8	NNC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	0	-332	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	285.168049273636	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTTATTTAAGTCT	NA	False	NA	16	True	AATAAA	-12	NA	138448315	138484451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.5	chr7	+	2020	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-19	86	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTTAGCAAAATGGTC	NA	False	NA	106	True	AATAAA	-20	NA	138448068	138484872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.50	chr7	+	1776	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCCACTGCAGTCTTT	NA	False	NA	16	True	AATAAA	-30	NA	138448318	138484782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.51	chr7	+	1439	5	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	304.918431715762	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448318	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138474729_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.52	chr7	+	1445	7	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	0	-327	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	229.285423774726	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTAAGTCTGAGCC	NA	False	NA	21	True	AATAAA	-17	NA	138448323	138484456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.54	chr7	+	1410	4	NNC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	319.381694319926	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448327	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138448434_138475817_138476014_138478184_138478447_138483937
ES.32168.55	chr7	+	7179	4	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	6	89	intron_retention	FALSE	canonical	3	563	junction_1	82.8103589869985	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAGCAAAATGGTCAAG	NA	False	NA	109	True	AATAAA	-23	NA	138448329	138484875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138470138_138476014_138478184_138478447_138483937
ES.32168.56	chr7	+	5616	5	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	59	-325	intron_retention	FALSE	canonical	3	563	junction_1	73.9505747104105	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138448407	138484458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448434_138470138_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.57	chr7	+	3146	7	NIC	ENSMUSG00000041769.14	novel	700	6	NA	NA	-23	0	intron_retention	FALSE	canonical	2	13	junction_1	241.904538104508	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448565	138484786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448813_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.58	chr7	+	2060	8	NIC	ENSMUSG00000041769.14	novel	700	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	234.141418979284	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448580	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448813_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.59	chr7	+	6097	4	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	-507	-325	intron_retention	FALSE	canonical	3	680	junction_2	35.1220095603249	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAAGTCTGAGCCTT	NA	False	NA	23	True	AATAAA	-19	NA	138469631	138484458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.6	chr7	+	1720	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	269.648215273159	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448068	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138448245_138448340_138448434_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.60	chr7	+	1732	6	ISM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	23093	0	1278	0	3prime_fragment	FALSE	canonical	3	482	junction_1	103.260834782603	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138471416	138484783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.61	chr7	+	2403	4	NIC	ENSMUSG00000041769.14	novel	1938	8	NA	NA	1883	-326	intron_retention	FALSE	canonical	3	562	junction_1	83.2386128348297	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138472021	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138472232_138474602_138476014_138478184_138478447_138483937
ES.32168.62	chr7	+	3904	1	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	7668	-3073	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAACCTGAAACATCAAC	NA	False	NA	NA	False	ATTAAA	-12	NA	138477806	138481710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138477800_138481700
ES.32168.7	chr7	+	2187	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	-17	-89	-17	89	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAGCAAAATGGTCAAG	NA	False	NA	109	True	AATAAA	-23	NA	138448070	138484875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32168.9	chr7	+	1759	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	-7	329	-7	-326	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTAAGTCTGAGCCT	NA	False	NA	22	True	AATAAA	-18	NA	138448080	138484457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ES.32169.1	chr7	-	5116	1	Genic_Genomic	ENSMUSG00000041775.8	novel	NA	NA	NA	NA	5324	5	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTGGGTTTTGTCCA	NA	False	NA	43	True	NA	NA	NA	138442662	138437546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_138437500_138442700
ES.32169.2	chr7	-	2925	2	NNC	ENSMUSG00000041775.8	novel	1502	2	NA	NA	7426	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTCAACTTGTTTTG	NA	False	NA	32	True	NA	NA	NA	138440560	138437557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138438902_138438979
ES.32169.3	chr7	-	1496	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	-9	15	4	-15	multi-exon	FALSE	canonical	3	55	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAATCCAC	NA	False	NA	13	True	NA	NA	NA	138447998	138437576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138438760_138447685
ES.32169.4	chr7	-	2915	2	NNC	ENSMUSG00000041775.8	novel	1502	2	NA	NA	7414	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCCAAAACAAACAAAAAAT	NA	False	NA	9	True	NA	NA	NA	138440572	138437580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138438910_138438986
ES.3217.1	chr10	+	1917	7	NIC	ENSMUSG00000000732.10	novel	1691	6	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	7.25143663926903	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGCTCAAGTAGATTC	NA	False	NA	NA	False	NA	NA	NA	77905141	77919745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77919003
ES.3217.2	chr10	+	2454	6	NIC	ENSMUSG00000000732.10	novel	2814	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.17216843081644	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905141	77915359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77905370_77906994_77907114_77909540_77909835_77911038_77911189_77912977_77913008_77913726
ES.3217.3	chr10	+	3520	6	ISM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	12	1	12	-1	intron_retention	FALSE	canonical	3	8	junction_2	4.4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGTGTCTGGTGGCT	NA	False	NA	4	True	AATAAA	-16	NA	77905147	77915358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977
ES.3217.4	chr10	+	3978	5	NIC	ENSMUSG00000000732.10	novel	2814	7	NA	NA	13	0	intron_retention	FALSE	canonical	3	16	junction_4	1.78535710713571	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905148	77915359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77905370_77906994_77907926_77909540_77909835_77911038_77911189_77912977
ES.3217.5	chr10	+	2785	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	29	0	-29	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905164	77915359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
ES.3217.6	chr10	+	3146	5	NIC	ENSMUSG00000000732.10	novel	2814	7	NA	NA	-23	2	intron_retention	FALSE	canonical	0	0	junction_2	7.79021822544144	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTCTGGTGGCTTGT	NA	False	NA	7	True	AATAAA	-19	NA	77905170	77915361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_77905370_77906994_77907114_77909540_77909835_77911038_77911189_77912977
ES.3217.7	chr10	+	3962	4	FSM	ENSMUSG00000000732.10	ENSMUST00000219633.2	2475	4	-1487	0	691	0	multi-exon	FALSE	canonical	3	9	junction_3	3.55902608401044	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77907685	77915359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_77909835_77911038_77911189_77912977_77913008_77913726
ES.32170.1	chr7	-	3318	1	Intergenic	novelGene_26326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	138456539	138453221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_138453200_138456500
ES.32171.1	chr7	-	7592	1	Antisense	novelGene_ENSMUSG00000041769.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCCTGAAGGCAACTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	138474027	138466435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_138466400_138474000
ES.32172.1	chr7	-	3627	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	2	-1873	2	1873	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	138511233	138490691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.10	chr7	-	1410	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	21	325	-6	-325	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGAATACTATATTTGC	NA	False	NA	NA	False	AATGAA	-24	NA	138511214	138492889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.11	chr7	-	1115	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	-17	658	-4	-658	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAATATTGTGGCCTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	138511252	138493222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.12	chr7	-	160	1	Intergenic	novelGene_26327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	138507470	138507310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_138507300_138507500
ES.32172.2	chr7	-	2111	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	-355	0	355	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTTATGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	138511235	138492209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.3	chr7	-	1651	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	-1	106	-1	-106	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGACATAGCCTATATCC	NA	False	NA	-2	True	AATAAA	-41	NA	138511236	138492670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.4	chr7	-	1620	6	NNC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	3	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	132.881902454774	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTATATTTACATAAT	NA	False	NA	-23	True	AATAAA	-20	NA	138511232	138492691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138493690_138496108_138496253_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ES.32172.7	chr7	-	5147	4	NIC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	-4297	-128	combination_of_known_splicesites	FALSE	canonical	2	23	junction_3	130.624993354598	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138504302	138492692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_138493690_138496108_138496259_138496338_138496446_138500409
ES.32172.8	chr7	-	5461	5	NNC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	2	-130	intron_retention	TRUE	non_canonical	0	0	junction_3	130.711514412465	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATATTTACAT	NA	False	NA	-26	True	AATAAA	-17	NA	138511233	138492694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138493690_138496108_138496259_138496338_138498280_138498324_138500558_138511091
ES.32172.9	chr7	-	1479	5	NNC	ENSMUSG00000078566.9	novel	1756	6	NA	NA	-4	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.233768082715	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTTTTGTTTATATT	NA	False	NA	-31	True	AATAAA	-12	NA	138511212	138492699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138493690_138496108_138496192_138496308_138496446_138500409_138500558_138511091
ES.32173.1	chr7	+	192	1	Intergenic	novelGene_26328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTCAAGTACAGCATG	4645	False	NA	NA	False	NA	NA	NA	138559868	138560060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138559900_138560100
ES.32174.1	chr7	-	176	1	Intergenic	novelGene_26329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAATCCAGCAAATG	NA	False	NA	NA	False	NA	NA	NA	138575528	138575352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_138575400_138575500
ES.32175.1	chr7	+	4960	9	NNC	ENSMUSG00000056856.15	novel	358	2	NA	NA	-20153	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCAAGGTGTCTCCTTG	NA	False	NA	NA	False	AATAAA	-16	NA	138637194	138663891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138637239_138637715_138637785_138637870_138637949_138641353_138641558_138642526_138642593_138645221_138646175_138655998_138656049_138656414_138657614_138661594
ES.32176.1	chr7	+	2644	14	FSM	ENSMUSG00000025478.16	ENSMUST00000026551.15	3552	14	-1	909	-1	0	multi-exon	FALSE	canonical	1	1	junction_6	3.36181128975572	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGTTAGAAACTGCCT	NA	False	NA	NA	False	NA	NA	NA	138665915	138681711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138666078_138669425_138669515_138670074_138670260_138671777_138671943_138673521_138673584_138673676_138673758_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
ES.32176.2	chr7	+	4176	13	NNC	ENSMUSG00000025478.16	novel	4196	13	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_5	3.45205252953466	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGTTAGAAACTGCCT	NA	False	NA	NA	False	NA	NA	NA	138665929	138681711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138666078_138669425_138669515_138670074_138670260_138671777_138673584_138673676_138673725_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
ES.32176.3	chr7	+	5165	9	NNC	ENSMUSG00000025478.16	novel	4196	13	NA	NA	2899	0	intron_retention	FALSE	canonical	0	0	junction_3	4.70206071845101	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGTTAGAAACTGCCT	NA	False	NA	NA	False	NA	NA	NA	138672061	138681711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138673584_138673676_138673758_138674309_138674379_138674551_138674682_138674772_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
ES.32177.1	chr7	+	3013	12	NNC	ENSMUSG00000015980.15	novel	585	4	NA	NA	134	984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.81601670214825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAACTTGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	138793321	138823879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138793361_138794164_138794322_138794590_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807835_138807983_138810118_138810213_138816785_138816905_138818491_138818616_138822535
ES.32177.2	chr7	+	2276	8	NNC	ENSMUSG00000015980.15	novel	585	4	NA	NA	134	2	intron_retention	FALSE	canonical	0	0	junction_2	3.1943828249997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGGAAGTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	138793321	138808926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138793361_138794164_138794322_138794590_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807835
ES.32177.3	chr7	+	2084	6	ISM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	1683	13969	-4	2	internal_fragment	FALSE	canonical	2	4	junction_1	2.0591260281974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGGAAGTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	138794586	138808926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807835
ES.32177.4	chr7	+	1449	9	NIC	ENSMUSG00000015980.15	novel	351	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	3.53553390593274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTCTCTTCTGTCGC	NA	False	NA	NA	False	ATTAAA	-24	NA	138800519	138822892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138800555_138801309_138801369_138803504_138803658_138805916_138806278_138807835_138807983_138810118_138810213_138816785_138816905_138818491_138818616_138822535
ES.32177.5	chr7	+	1686	5	NIC	ENSMUSG00000015980.15	novel	351	4	NA	NA	6	2	intron_retention	FALSE	canonical	2	2	junction_1	2.69258240356725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGGAAGTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	138800532	138808926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138800555_138801309_138801369_138803504_138803658_138805916_138806278_138807835
ES.32177.6	chr7	+	2040	4	ISM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	8034	13965	124	6	internal_fragment	FALSE	canonical	2	7	junction_1	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGTCTGCCTCTGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	138800937	138808930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138801369_138803504_138803658_138805916_138806278_138807835
ES.32177.7	chr7	+	733	4	FSM	ENSMUSG00000015980.15	ENSMUST00000126213.8	744	4	16	-5	16	0	multi-exon	FALSE	canonical	2	4	junction_1	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTCTCTTCTGTCGC	NA	False	NA	NA	False	ATTAAA	-24	NA	138813874	138822892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138814008_138816785_138816905_138818491_138818616_138822535
ES.32178.1	chr7	+	2982	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	-346	-93	-341	93	multi-exon	FALSE	canonical	3	21	junction_2	19.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTCAAAGCTGCACCT	NA	False	NA	NA	False	AATAAA	-29	NA	138828056	138847170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138828560_138834685_138836382_138846387
ES.32178.2	chr7	+	2684	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-341	714	-341	100	multi-exon	FALSE	canonical	3	49	junction_2	5.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGCACCTGCCTGAC	NA	False	NA	NA	False	AATAAA	-36	NA	138828056	138847177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138828560_138834685_138836077_138846387
ES.32178.3	chr7	+	3343	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-287	1	-287	-1	multi-exon	FALSE	canonical	3	49	junction_2	5.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTGCTTCTCTCAACT	NA	False	NA	NA	False	NA	NA	NA	138828110	138847890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138828560_138834685_138836077_138846387
ES.32178.4	chr7	+	3962	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	-26	-879	-26	879	multi-exon	FALSE	canonical	3	49	junction_2	5.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGTCCCAGGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	138828371	138848770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138828560_138834685_138836077_138846387
ES.32178.5	chr7	+	4902	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	5	-1850	0	-78	multi-exon	FALSE	canonical	3	49	junction_2	5.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATTTTGATCATATT	NA	False	NA	NA	False	TTTAAA	-29	NA	138828402	138849741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138828560_138834685_138836077_138846387
ES.32179.1	chr7	+	815	3	Intergenic	novelGene_26330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTGAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	138861788	138869567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138862085_138867230_138867344_138869161
ES.32179.2	chr7	+	295	1	Intergenic	novelGene_26331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAGAAACGTAG	NA	False	NA	NA	False	NA	NA	NA	138866406	138866701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138866400_138866700
ES.3218.1	chr10	-	2012	6	NIC	ENSMUSG00000053329.8	novel	1378	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	30	junction_4	5.08330601085553	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGTCTCAGGCCTTGT	4174	False	NA	-3	True	AATAAA	-28	NA	78005573	77997900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ES.3218.2	chr10	-	1374	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	-4	8	-4	1	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCAGCTATGTCTCAG	4127	False	NA	-10	True	AATAAA	-21	NA	78005620	77997907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ES.3218.3	chr10	-	847	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	14	517	6	128	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACCACGCTTGGCCTCCG	4145	False	NA	NA	False	NA	NA	NA	78005602	77998416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ES.32180.1	chr7	-	577	4	NNC	ENSMUSG00000110115.2	novel	3816	2	NA	NA	0	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	9198	False	NA	NA	False	NA	NA	NA	138876781	138873890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_138874100_138874430_138874585_138876334_138876456_138876688
ES.32181.1	chr7	+	150	1	Intergenic	novelGene_26332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGAAAATGT	935	False	NA	NA	False	NA	NA	NA	138941665	138941815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138941700_138941800
ES.32182.1	chr7	-	178	1	Intergenic	novelGene_26333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	138953850	138953672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_138953700_138953800
ES.32183.1	chr7	+	178	1	Intergenic	novelGene_26334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAATGTGGG	NA	False	NA	NA	False	NA	NA	NA	138959101	138959279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_138959100_138959300
ES.32184.1	chr7	+	2855	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-27	-2	-27	2	multi-exon	TRUE	canonical	3	132	junction_13	16.0850517216728	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTGCTTATTCTCCTG	NA	False	NA	21	True	AATAAA	-22	NA	138968997	139159570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.10	chr7	+	5548	17	NNC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.2886059788506	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969008	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139092155_139094868_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.11	chr7	+	2414	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-16	428	-16	-1	multi-exon	FALSE	canonical	3	132	junction_13	16.0850517216728	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAAGTAGCCTCGTCCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	138969008	139159140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.12	chr7	+	2786	16	FSM	ENSMUSG00000025477.15	ENSMUST00000026550.14	2774	16	-14	2	-13	-2	multi-exon	FALSE	canonical	3	14	junction_15	41.2685513839938	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCCTGCTGCTTATTCT	NA	False	NA	17	True	AATAAA	-18	NA	138969011	139159566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158135_139158269
ES.32184.14	chr7	+	2852	16	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	42.9959171188252	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969024	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138969381_139033969_139034012_139057910_139058044_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.15	chr7	+	5117	15	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	143	junction_10	13.3563788933549	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGCTGCTTATTCTC	NA	False	NA	18	True	AATAAA	-19	NA	138969026	139159567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139157335_139158097_139158186_139158269
ES.32184.18	chr7	+	2623	16	NNC	ENSMUSG00000025477.15	novel	748	7	NA	NA	13177	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.9540011814546	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	4149	False	NA	13	True	AATAAA	-14	NA	138993581	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138993741_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.19	chr7	+	180	1	Intergenic	novelGene_26335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTGGCAT	8482	False	NA	NA	False	NA	NA	NA	139078998	139079178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_139079000_139079200
ES.32184.2	chr7	+	2780	17	NNC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	43.5315528525	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969000	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269_139158772_139158835
ES.32184.20	chr7	+	5318	2	Intergenic	novelGene_26336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGTTGTATTTC	9003	False	NA	NA	False	NA	NA	NA	139079519	139085068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_139082537_139082767
ES.32184.21	chr7	+	1643	10	ISM	ENSMUSG00000025477.15	ENSMUST00000097975.3	2301	16	123346	3	-23	-3	3prime_fragment	FALSE	canonical	3	132	junction_7	20.0024689834055	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAAGTAGCCTCGTCC	7425	False	NA	NA	False	ATTAAA	-19	NA	139103750	139159138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.22	chr7	+	5998	2	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	49034	0	intron_retention	FALSE	canonical	3	170	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	19	True	AATAAA	-20	NA	139152807	139159568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139157335_139158097
ES.32184.3	chr7	+	3606	15	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-23	-6	intron_retention	FALSE	canonical	3	132	junction_13	16.63979125654	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969001	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139158186_139158269
ES.32184.5	chr7	+	1612	12	ISM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-23	11884	-23	-7441	5prime_fragment	FALSE	canonical	3	143	junction_10	14.3866329143261	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACCTCTTTCCAATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	138969001	139147684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279
ES.32184.7	chr7	+	3260	17	NNC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-23	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.0232002742334	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACAGTTCCTGCTGCT	NA	False	NA	11	True	AATAAA	-12	NA	138969001	139159560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139092155_139092506_139096546_139096653_139103685_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.8	chr7	+	2653	14	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	-22	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	47.8867006033466	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	False	NA	13	True	AATAAA	-14	NA	138969002	139159562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_138969381_139033969_139034012_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ES.32184.9	chr7	+	2918	15	ISM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	-16	8	-16	-8	intron_retention	FALSE	canonical	3	132	junction_13	16.2524723393968	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACAGTTCCTGCTGCT	NA	False	NA	11	True	AATAAA	-12	NA	138969008	139159560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097
ES.32185.1	chr7	-	3763	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	0	-1856	0	1856	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTTGCTTGGTAAAGC	NA	False	NA	NA	False	ATTAAA	-21	NA	139162713	139157435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
ES.32185.2	chr7	-	1911	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	-5	1	-5	-1	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCTCCGCAGGCGCCT	NA	False	NA	-10	True	AATAAA	-19	NA	139162718	139159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
ES.32185.3	chr7	-	3383	2	NIC	ENSMUSG00000041309.18	novel	1299	3	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	81	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCTCCGCAGGCGCCT	NA	False	NA	-10	True	AATAAA	-19	NA	139162755	139159292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139161970_139162049
ES.32185.4	chr7	-	1349	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	-50	0	-43	0	multi-exon	FALSE	canonical	3	81	junction_2	2	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGCACATCGTGTTTC	NA	False	NA	-8	True	AATAAA	-36	NA	139162756	139161135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139161605_139161796_139161970_139162049
ES.32186.1	chr7	-	978	8	NIC	ENSMUSG00000049571.19	novel	1438	14	NA	NA	1818	27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.880630571852711	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAACAAAACAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	139194407	139180839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139181196_139185508_139185622_139186513_139186617_139186994_139187031_139187105_139187167_139187262_139187334_139191892_139192046_139194322
ES.32187.1	chr7	-	3788	15	ISM	ENSMUSG00000049571.19	ENSMUST00000129990.9	8180	59	29139	36051	6429	1776	internal_fragment	FALSE	canonical	0	0	junction_1	0.257539376818856	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCCTTTTCTGAGGTC	-3	True	NA	NA	False	NA	NA	NA	139234594	139216917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139218345_139218597_139218958_139219458_139219662_139220251_139220424_139222345_139222530_139222751_139222891_139225391_139225480_139226194_139226358_139226891_139227024_139230702_139230870_139231454_139231563_139232312_139232463_139232570_139232737_139233310_139233524_139234478
ES.32187.2	chr7	-	3954	15	NIC	ENSMUSG00000049571.19	novel	8180	59	NA	NA	6314	1771	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTGTTTCCTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	139234709	139216922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139218345_139218597_139218958_139219458_139219662_139220251_139220424_139222345_139222530_139222751_139222891_139225391_139225480_139226194_139226358_139226891_139227024_139230702_139230870_139231454_139231563_139232312_139232463_139232570_139232737_139233254_139233524_139234478
ES.32188.1	chr7	-	659	1	FSM	ENSMUSG00000083626.2	ENSMUST00000118750.2	468	1	-22	-169	-22	169	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGGAAACAGTCTAAA	NA	False	NA	NA	False	AATAAA	-41	NA	139240093	139239434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139239400_139240100
ES.32189.1	chr7	-	157	1	Intergenic	novelGene_26337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAATCTCTGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	139427029	139426872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_139426900_139427000
ES.3219.1	chr10	-	3888	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	-12	-4	-12	4	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGTGTGTGGTATG	NA	False	NA	-1	True	AATACA	-21	NA	78020995	78006738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.11	chr10	-	3826	21	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	50.3417073607958	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTTTTGTCTGTGTGT	NA	False	NA	-7	True	AATACA	-15	NA	78020948	78006744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78019996_78020904
ES.3219.12	chr10	-	2744	12	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	6055	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.1968411748112	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTTTTGTCTGTGTG	NA	False	NA	-8	True	AATACA	-14	NA	78014928	78006745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009280_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794
ES.3219.14	chr10	-	3229	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	-23	666	-23	-666	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCCTGGGTGAGAC	NA	False	NA	-1	True	NA	NA	NA	78021006	78007408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.15	chr10	-	5294	18	ISM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	32	686	32	-686	intron_retention	FALSE	canonical	3	184	junction_16	14.8524461187153	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTTCCGGTGTTTC	NA	False	NA	-21	True	NA	NA	NA	78020951	78007428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456
ES.3219.16	chr10	-	3070	21	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	-10	-686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	50.5147503210696	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTTCCGGTGTTTC	NA	False	NA	-21	True	NA	NA	NA	78020993	78007428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014309_78014818_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.17	chr10	-	3639	19	NIC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	43	-687	intron_retention	FALSE	canonical	3	184	junction_14	15.140902006824	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTTCCGGTGTTT	NA	False	NA	-22	True	NA	NA	NA	78020940	78007429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.19	chr10	-	3165	21	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	15	-688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.0142632100062	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGAGTTTCCGGTGTT	NA	False	NA	-23	True	NA	NA	NA	78020968	78007430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009880_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018366_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.2	chr10	-	3904	22	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6587410254802	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78020967	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78008466_78008516_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.21	chr10	-	3184	22	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	-1	-738	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6587410254802	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGGGTTGGGAAGAGC	NA	False	NA	0	True	NA	NA	NA	78020984	78007480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78008466_78008516_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.3	chr10	-	4614	20	NIC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	36	-1	intron_retention	FALSE	canonical	3	184	junction_15	15.0399283902344	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78020947	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.4	chr10	-	3800	21	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	53	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	49.9518768416163	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78020930	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017463_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.6	chr10	-	3072	15	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	3982	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	58.125172810803	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78017001	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011408_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882
ES.3219.7	chr10	-	3186	1	NIC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	11054	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78009929	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78006700_78009900
ES.3219.8	chr10	-	3803	21	NNC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	50.5350126150177	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	False	NA	-6	True	AATACA	-16	NA	78020961	78006743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78016005_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ES.3219.9	chr10	-	4062	20	NIC	ENSMUSG00000032834.12	novel	3872	21	NA	NA	31	-2	intron_retention	FALSE	canonical	3	184	junction_16	14.2570388894306	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTTTTGTCTGTGTGT	NA	False	NA	-7	True	AATACA	-15	NA	78020952	78006744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018875_78019891_78020005_78020904
ES.32190.1	chr7	+	3974	16	NNC	ENSMUSG00000066129.18	novel	7299	30	NA	NA	-1661	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.788810637746616	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTACTGTCCTACGGTCC	NA	False	NA	6	True	AATAAA	-13	NA	139501806	139521450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139501829_139502579_139502666_139503647_139504058_139507090_139507185_139507269_139507372_139507595_139507817_139509932_139510047_139510576_139510725_139510822_139511003_139511609_139511817_139512428_139512512_139512755_139512907_139516697_139516821_139516901_139516966_139517904_139518063_139519639
ES.32191.1	chr7	+	1291	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	-61	-3	-61	3	multi-exon	FALSE	canonical	3	805	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGAATTCGGACTCC	NA	False	NA	NA	False	AATAAA	-23	NA	139523640	139525028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139524343_139524439
ES.32191.3	chr7	+	1327	1	Genic_Genomic	ENSMUSG00000047751.10	novel	NA	NA	NA	NA	-5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGTGAATGAATTCGG	NA	False	NA	NA	False	AATAAA	-18	NA	139523696	139525023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_139523700_139525000
ES.32192.1	chr7	-	1214	1	Intergenic	novelGene_26338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139528662	139527448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_139527400_139528700
ES.32193.1	chr7	+	695	3	NIC	ENSMUSG00000086742.9	novel	709	5	NA	NA	270	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAGCAAAACCTGGAT	4894	False	NA	NA	False	AATAAA	-12	NA	139530622	139548104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139530798_139531778_139531866_139547671
ES.32194.1	chr7	-	175	1	Intergenic	novelGene_26339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGATCA	9597	False	NA	NA	False	NA	NA	NA	139573203	139573028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_139573000_139573200
ES.32195.1	chr7	+	3130	1	Antisense	novelGene_ENSMUSG00000025474.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACTTTTAAGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	139585316	139588446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_139585300_139588400
ES.32195.2	chr7	+	1795	4	Antisense	novelGene_ENSMUSG00000025474.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACTTTTAAGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	139585316	139588446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_139586076_139586766_139586957_139587340_139587538_139587797
ES.32196.1	chr7	+	1106	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	-27	-3	-6	3	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTCTTCTTCATGTGT	NA	False	NA	22	True	AATAAA	-19	NA	139616297	139620518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ES.32196.10	chr7	+	1528	4	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	25	0	intron_retention	FALSE	canonical	3	44	junction_2	150.645278717921	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATCTGTTCTTCTTC	NA	False	NA	16	True	AATAAA	-13	NA	139616349	139620512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139617335_139617428_139617495_139619238_139619359_139620155
ES.32196.11	chr7	+	727	3	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616351	139620513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139616520_139619157_139619359_139620155
ES.32196.12	chr7	+	1844	5	FSM	ENSMUSG00000025470.12	ENSMUST00000210882.2	1757	5	-88	1	28	-1	multi-exon	FALSE	canonical	3	304	junction_1	31.3318926973779	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATCTGTTCTTCTTCAT	NA	False	NA	18	True	AATAAA	-15	NA	139616352	139620514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238
ES.32196.13	chr7	+	1031	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	132.693029206511	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCATCTGTTCTTCTT	NA	False	NA	15	True	AATAAA	-12	NA	139616412	139620511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619406_139620155
ES.32196.2	chr7	+	999	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616325	139620513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ES.32196.3	chr7	+	1491	4	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	3	1	intron_retention	FALSE	canonical	3	304	junction_1	12.657891697365	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616327	139620513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616520_139616732_139617554_139619238_139619359_139620155
ES.32196.4	chr7	+	4184	1	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	5	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616329	139620513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616300_139620500
ES.32196.5	chr7	+	1012	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	120.382058463876	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616329	139620515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617495_139619238_139619359_139620155
ES.32196.6	chr7	+	3079	4	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	304	junction_1	33.8066397160216	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATCTGTTCTTCTTC	NA	False	NA	16	True	AATAAA	-13	NA	139616329	139620512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616520_139616732_139617335_139617428_139619359_139620155
ES.32196.7	chr7	+	1175	7	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	157.078182939438	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATCTGTTCTTCTTC	NA	False	NA	16	True	AATAAA	-13	NA	139616330	139620512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139619702_139619811_139620155
ES.32196.8	chr7	+	661	3	NIC	ENSMUSG00000025470.12	novel	878	5	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	167	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCATCTGTTCTTCTT	NA	False	NA	15	True	AATAAA	-12	NA	139616334	139620511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616520_139619238_139619359_139620155
ES.32196.9	chr7	+	1264	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	23	1	intron_retention	FALSE	canonical	3	319	junction_3	26.6176633084123	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATCTGTTCTTCTTCA	NA	False	NA	17	True	AATAAA	-14	NA	139616347	139620513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ES.32197.1	chr7	-	3640	18	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	27	805	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	108.703113028132	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGTCTCCCCAGACAT	NA	False	NA	NA	False	AATAAA	-22	NA	139616276	139575062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578002_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.12	chr7	-	4568	14	NIC	ENSMUSG00000025474.10	novel	2837	17	NA	NA	26	0	intron_retention	FALSE	canonical	1	4	junction_10	125.785766967482	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616277	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.13	chr7	-	5381	17	ISM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-83	-41	-17	0	intron_retention	FALSE	canonical	3	352	junction_11	31.5017360632712	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616262	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.14	chr7	-	3141	17	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	10	0	intron_retention	FALSE	canonical	2	2	junction_15	120.406862345964	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616293	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612148_139613525_139613712_139616259
ES.32197.15	chr7	-	3290	17	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_8	146.038615933424	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139613713	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139582957_139583126_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.16	chr7	-	3056	16	NNC	ENSMUSG00000025474.10	novel	2837	17	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_12	122.65228176525	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616288	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588075_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.17	chr7	-	3136	17	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	28	0	intron_retention	FALSE	canonical	3	194	junction_16	65.9151917239114	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616275	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.18	chr7	-	3985	18	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	142.849547005179	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGGCTCAATGATTT	NA	False	NA	NA	False	NA	NA	NA	139616196	139575868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580925_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139615042
ES.32197.2	chr7	-	3932	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	25	-897	25	804	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGGTCTCCCCAGACA	NA	False	NA	NA	False	AATAAA	-21	NA	139616557	139575063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.20	chr7	-	2690	17	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_13	118.476115077048	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616281	139575869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.21	chr7	-	3737	15	NIC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	19	-2	intron_retention	FALSE	canonical	1	4	junction_11	130.765563712551	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616223	139575869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.22	chr7	-	3895	16	NIC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	21	-2	intron_retention	FALSE	canonical	3	147	junction_15	78.3659790130045	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616221	139575869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.24	chr7	-	4894	17	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	22	-2	intron_retention	FALSE	canonical	1	3	junction_7	119.776076884117	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTGGCTCAATGATT	NA	False	NA	NA	False	NA	NA	NA	139616281	139575869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139582957_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.25	chr7	-	2978	18	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	151.323663751155	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTGTCTTGGCTCAAT	NA	False	NA	NA	False	NA	NA	NA	139616219	139575873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587562_139587799_139588008_139609739_139609821_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.26	chr7	-	2887	17	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-26	2	combination_of_known_splicesites	FALSE	canonical	2	24	junction_2	117.855429844153	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGAGTTTCTGTCTTGGC	NA	False	NA	NA	False	NA	NA	NA	139616205	139575878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.27	chr7	-	2816	17	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	107.805507019586	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGTTTGAGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	139613693	139575885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587562_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.29	chr7	-	3958	16	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	30	-2	intron_retention	FALSE	canonical	2	2	junction_14	158.709994084249	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGCATTATTAC	NA	False	NA	NA	False	NA	NA	NA	139616212	139575910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587562_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612148_139613525_139613712_139616008
ES.32197.3	chr7	-	3880	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-75	-845	-9	804	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGGTCTCCCCAGACA	NA	False	NA	NA	False	AATAAA	-21	NA	139616254	139575063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.30	chr7	-	3992	15	ISM	ENSMUSG00000025474.10	ENSMUST00000210224.2	2837	17	2462	45	-23	-4	intron_retention	FALSE	canonical	1	4	junction_13	114.601639230361	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTTGTGCATTATT	NA	False	NA	NA	False	NA	NA	NA	139613713	139575912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139610923_139611101_139612031
ES.32197.31	chr7	-	5417	14	NIC	ENSMUSG00000025474.10	novel	2610	15	NA	NA	11	-4	intron_retention	FALSE	canonical	3	194	junction_13	68.4470166102237	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTTGTGCATTATT	NA	False	NA	NA	False	NA	NA	NA	139616292	139575912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.32	chr7	-	2907	18	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_12	121.634912352968	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTTGTGCATTATT	NA	False	NA	NA	False	NA	NA	NA	139616262	139575912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587931_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.33	chr7	-	2822	17	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	125.76402444161	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTTGTGCATTATT	NA	False	NA	NA	False	NA	NA	NA	139616222	139575912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139612031_139612161_139613525_139613712_139616008
ES.32197.35	chr7	-	2963	18	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	122.327061742699	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139616201	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612148_139613525_139613712_139616008
ES.32197.36	chr7	-	2794	18	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	140.648399629498	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139616287	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576075_139576694_139576859_139577884_139578002_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.37	chr7	-	2952	16	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	27	-6	intron_retention	FALSE	canonical	1	4	junction_12	153.545302761107	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139616276	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587562_139587799_139588008_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.38	chr7	-	3222	17	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	-23	-6	intron_retention	FALSE	canonical	0	0	junction_8	170.231781330632	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139613713	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576075_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139582957_139583110_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.39	chr7	-	2852	17	NNC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	107.378928915314	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139613713	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588075_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.4	chr7	-	3192	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	-26	-106	-26	13	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCCTTTTTCAAGATG	NA	False	NA	NA	False	NA	NA	NA	139616608	139575854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.40	chr7	-	4594	16	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	-23	-6	intron_retention	FALSE	canonical	0	0	junction_5	176.661207462822	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	False	NA	NA	False	NA	NA	NA	139613713	139575914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580925_139581057_139581338_139581512_139582957_139583110_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031
ES.32197.41	chr7	-	3048	18	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	27	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	122.702301002387	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGCTGTTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	139616215	139575915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612220_139613525_139613712_139616008
ES.32197.42	chr7	-	3904	16	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	8	junction_10	128.025101705356	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGCTGTTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	139616254	139575915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587562_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.43	chr7	-	3641	17	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	28	-7	intron_retention	FALSE	canonical	3	194	junction_16	65.818761572974	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGCTGTTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	139616554	139575915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.45	chr7	-	4504	16	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	14	-9	intron_retention	FALSE	canonical	3	194	junction_15	63.9600569800316	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGGCTGTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	139616289	139575917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.46	chr7	-	3290	17	FSM	ENSMUSG00000025474.10	ENSMUST00000209930.2	3341	17	14	37	14	-9	multi-exon	FALSE	canonical	3	147	junction_16	76.1033169037329	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGGCTGTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	139616228	139575917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.47	chr7	-	3289	17	NNC	ENSMUSG00000025474.10	novel	3341	17	NA	NA	-7	-9	intron_retention	FALSE	canonical	0	0	junction_8	125.659992017149	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGGCTGTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	139616252	139575917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585952_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.48	chr7	-	2899	17	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	125.609762757518	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGGCTGTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	139616256	139575917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139613525_139613712_139616008
ES.32197.49	chr7	-	2858	13	ISM	ENSMUSG00000025474.10	ENSMUST00000209930.2	3341	17	2529	2560	-23	0	internal_fragment	FALSE	canonical	3	352	junction_7	29.4348385798567	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCGAGCAGTTGTGCAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	139613713	139578440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.5	chr7	-	3702	16	NIC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	26	0	intron_retention	FALSE	canonical	3	194	junction_15	67.8728877305872	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616277	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.50	chr7	-	3422	12	NIC	ENSMUSG00000025474.10	novel	2610	15	NA	NA	-23	0	intron_retention	FALSE	canonical	3	352	junction_6	30.5792561893011	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCGAGCAGTTGTGCAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	139613713	139578440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ES.32197.51	chr7	-	2897	6	NNC	ENSMUSG00000025474.10	novel	565	4	NA	NA	10	15351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.841584805738	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATCGCCTAAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	139616293	139594513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139594633_139607649_139609900_139610923_139611103_139612031_139612161_139613525_139613712_139616259
ES.32197.52	chr7	-	3086	6	NNC	ENSMUSG00000025474.10	novel	646	4	NA	NA	5	15351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.928589107498	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATCGCCTAAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	139616237	139594513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139594629_139607649_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.54	chr7	-	9141	5	ISM	ENSMUSG00000025474.10	ENSMUST00000211186.2	2610	15	28	22826	28	8598	5prime_fragment	FALSE	canonical	3	194	junction_4	101.075466855217	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGTCCATAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	139616275	139601266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.6	chr7	-	3076	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	-75	-41	-9	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616254	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ES.32197.7	chr7	-	2841	18	NNC	ENSMUSG00000025474.10	novel	3060	18	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	117.238201315744	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616288	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585945_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32197.8	chr7	-	3020	16	NNC	ENSMUSG00000025474.10	novel	2837	17	NA	NA	22	0	intron_retention	FALSE	canonical	1	4	junction_12	153.802412927178	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616281	139575867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580889_139581057_139581338_139581512_139584711_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ES.32198.1	chr7	-	2135	2	FSM	ENSMUSG00000025469.11	ENSMUST00000172775.4	2070	2	-74	9	-73	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATAATATTGCATGGA	9915	False	NA	NA	False	AATAAA	-5	NA	139629075	139626295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139628054_139628698
ES.32199.1	chr7	+	178	1	Intergenic	novelGene_26340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	139632549	139632727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_139632500_139632700
ES.322.1	chr1	+	855	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	22	92	22	79	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTAGGCTCCTAACACA	NA	False	NA	125	True	NA	NA	NA	37929579	37937524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.2	chr1	+	668	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	-33	27	22	-1	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGCTGATGGAGTCCT	NA	False	NA	19	True	ATTAAA	-19	NA	37929579	37937418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.3	chr1	+	707	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	64	198	-2	-1	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGCTGATGGAGTCCT	NA	False	NA	19	True	ATTAAA	-19	NA	37929621	37937418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.4	chr1	+	731	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	10	-79	-1	79	multi-exon	FALSE	canonical	3	190	junction_1	367.71796257458	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTAGGCTCCTAACACA	NA	False	NA	125	True	NA	NA	NA	37929622	37937524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.5	chr1	+	3063	5	FSM	ENSMUSG00000026087.12	ENSMUST00000194857.6	501	5	-2391	-171	-1	-2	multi-exon	FALSE	canonical	3	895	junction_1	64.9514241568266	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCGCTGATGGAGTCC	NA	False	NA	18	True	ATTAAA	-18	NA	37929622	37937417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.6	chr1	+	5480	4	NIC	ENSMUSG00000026087.12	novel	969	6	NA	NA	5	-1	intron_retention	FALSE	canonical	3	24	junction_1	474.890162739414	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGCTGATGGAGTCCT	NA	False	NA	19	True	ATTAAA	-19	NA	37929628	37937418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37931254_37932023_37933097_37934410_37936916_37937141
ES.322.7	chr1	+	3194	5	NIC	ENSMUSG00000026087.12	novel	969	6	NA	NA	11	-4	intron_retention	FALSE	canonical	3	24	junction_1	439.512514042547	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCTCCGCTGATGGAGT	NA	False	NA	16	True	ATTAAA	-16	NA	37929634	37937415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_37931254_37932023_37933097_37934410_37934492_37936768_37936916_37937141
ES.322.8	chr1	+	3960	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	-3375	2	17	-2	multi-exon	FALSE	canonical	3	1006	junction_1	22.6421435969889	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCGCTGATGGAGTCC	NA	False	NA	18	True	ATTAAA	-18	NA	37929640	37937417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
ES.3220.1	chr10	-	162	1	Intergenic	novelGene_2524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	78022041	78021879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78021900_78022000
ES.32200.1	chr7	+	5351	2	Intergenic	novelGene_26341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	139641676	139648919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_139645554_139647445
ES.32201.1	chr7	-	674	2	ISM	ENSMUSG00000025468.16	ENSMUST00000211044.2	1029	6	11390	5	11390	1	3prime_fragment	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGGTCGTGGTTTCTCT	9429	False	NA	-6	True	AGTAAA	-12	NA	139650750	139649798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139649947_139650224
ES.32202.1	chr7	-	172	1	Intergenic	novelGene_26342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAATATTAAAAT	4766	False	NA	NA	False	NA	NA	NA	139655413	139655241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_139655200_139655400
ES.32203.1	chr7	-	180	1	Intergenic	novelGene_26343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCATACGTTA	4414	False	NA	NA	False	NA	NA	NA	139655765	139655585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_139655600_139655800
ES.32204.1	chr7	+	585	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	2	33	2	-33	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAAATACC	NA	False	NA	NA	False	NA	NA	NA	139673309	139677080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
ES.32205.1	chr7	-	3074	5	NIC	ENSMUSG00000025466.20	novel	680	6	NA	NA	0	2301	intron_retention	FALSE	canonical	0	0	junction_1	225.411290755366	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	1568	False	NA	NA	False	NA	NA	NA	139682257	139674381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139676953_139681002_139681102_139681244_139681316_139681513_139681583_139681993
ES.32205.2	chr7	-	862	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	162.288138814887	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1518	False	NA	-2	True	NA	NA	NA	139682307	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
ES.32205.3	chr7	-	659	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	24	2	-11	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1495	False	NA	-2	True	NA	NA	NA	139682330	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ES.32205.4	chr7	-	851	5	ISM	ENSMUSG00000025466.20	ENSMUST00000120034.8	680	6	-34	2702	4	0	5prime_fragment	FALSE	canonical	3	247	junction_4	96.9278081873308	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1475	False	NA	-2	True	NA	NA	NA	139682350	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ES.32205.5	chr7	-	737	6	NNC	ENSMUSG00000025466.20	novel	685	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.556116127318	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1595	False	NA	-2	True	NA	NA	NA	139682230	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682041
ES.32205.6	chr7	-	751	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1915	False	NA	-2	True	NA	NA	NA	139681910	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
ES.32205.7	chr7	-	1954	4	FSM	ENSMUSG00000025466.20	ENSMUST00000121115.2	872	4	3	-1085	0	0	multi-exon	FALSE	canonical	3	247	junction_3	108.533660933167	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1509	False	NA	-2	True	NA	NA	NA	139682316	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139681102_139681244_139681316_139681513_139681583_139682219
ES.32205.8	chr7	-	2238	3	FSM	ENSMUSG00000025466.20	ENSMUST00000138197.2	443	3	12	-1807	2	0	multi-exon	FALSE	canonical	3	56	junction_2	213.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTCTTGTGGTGAGTT	1594	False	NA	-2	True	NA	NA	NA	139682231	139679384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139681316_139681513_139681583_139681993
ES.32205.9	chr7	-	956	5	NIC	ENSMUSG00000025466.20	novel	1685	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	179.398125686976	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCTTGTGGTGAG	1594	False	NA	-4	True	NA	NA	NA	139682231	139679386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681993
ES.32206.1	chr7	+	239	1	Antisense	novelGene_ENSMUSG00000025465.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTGCCTGCTTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	139693450	139693689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_139693400_139693700
ES.32207.1	chr7	-	1925	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	44	-412	-10	412	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAATTAGAGTAATTGTT	NA	False	NA	NA	False	NA	NA	NA	139696345	139685210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.10	chr7	-	4734	7	NNC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	662.102123710702	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTATTTGTGTGTTTTTA	NA	False	NA	-4	True	NA	NA	NA	139696328	139685625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139687462_139687761_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.12	chr7	-	3815	6	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1613	junction_1	107.86027999222	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCGTAACTATTTGTGTG	NA	False	NA	-10	True	NA	NA	NA	139696327	139685631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
ES.32207.13	chr7	-	3599	5	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1613	junction_2	114.702604591177	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCGTAACTATTTGTGTG	NA	False	NA	-10	True	NA	NA	NA	139696333	139685631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139692460_139692848_139693047_139696219
ES.32207.14	chr7	-	2458	5	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	7	-2	intron_retention	FALSE	canonical	1	2	junction_1	781.940654717479	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696313	139685632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139689899_139690557_139691608_139692460_139692848_139693047_139696219
ES.32207.15	chr7	-	1570	8	NNC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	611.892814409951	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696327	139685632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691794_139692331_139692460_139692848_139693047_139696219
ES.32207.16	chr7	-	3752	6	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1661	junction_1	95.7108144359873	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696327	139685632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.17	chr7	-	2108	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1613	junction_2	102.834278763887	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696327	139685632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
ES.32207.18	chr7	-	3320	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1661	junction_1	89.676114743869	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCGTAACTATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	139696327	139685632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.19	chr7	-	1291	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	635.883025581138	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCGTAACTATTTGTG	NA	False	NA	-12	True	NA	NA	NA	139696332	139685633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139696219
ES.32207.2	chr7	-	3303	8	NNC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	615.045510179399	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAGTGGAATTAG	NA	False	NA	NA	False	NA	NA	NA	139696327	139685220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139687462_139687761_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.20	chr7	-	1358	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	59	140	-2	-132	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGCTAAGGTTTCACT	NA	False	NA	NA	False	NA	NA	NA	139696330	139685762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.21	chr7	-	1142	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	32	383	-22	-375	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTCTTGATTTTTTTT	NA	False	NA	-4	True	NA	NA	NA	139696357	139686005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.22	chr7	-	978	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	55	524	1	-516	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTGTCGGCCACAGTTC	NA	False	NA	-1	True	AATAAA	-15	NA	139696334	139686146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.24	chr7	-	761	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	-3	-524	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	635.883025581138	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGTAGTAGTGTCGGC	NA	False	NA	-9	True	AATAAA	-7	NA	139696323	139686154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139696219
ES.32207.25	chr7	-	2140	7	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	62	1061	1	-1053	5prime_fragment	FALSE	canonical	3	1613	junction_1	98.6127386407163	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAAGAAGTGAAGATGT	NA	False	NA	NA	False	NA	NA	NA	139696327	139686683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.26	chr7	-	3735	5	NNC	ENSMUSG00000025465.14	novel	4088	3	NA	NA	-1	-1253	intron_retention	FALSE	canonical	0	0	junction_1	755.881273746082	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTAAGGAGATAAATGAC	NA	False	NA	NA	False	NA	NA	NA	139696321	139686883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139686967_139687272_139688065_139689899_139692460_139692848_139693047_139696219
ES.32207.27	chr7	-	7676	1	FSM	ENSMUSG00000025465.14	ENSMUST00000211120.2	3128	1	8	-4556	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACTCAGAAAAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	139696327	139688651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139688700_139696300
ES.32207.28	chr7	-	1981	6	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	61	3056	0	0	5prime_fragment	FALSE	canonical	3	1661	junction_4	88.9345826998699	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139696328	139688678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.29	chr7	-	171	1	ISM	ENSMUSG00000025465.14	ENSMUST00000147643.2	4088	3	4742	2737	4716	237	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAGAATAGGTGA	NA	False	NA	NA	False	NA	NA	NA	139691586	139691415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_139691400_139691600
ES.32207.3	chr7	-	4024	2	NNC	ENSMUSG00000025465.14	novel	3890	2	NA	NA	6757	402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAGTGGAATTAG	NA	False	NA	NA	False	NA	NA	NA	139689545	139685220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139687462_139687762
ES.32207.30	chr7	-	3144	1	FSM	ENSMUSG00000025465.14	ENSMUST00000211120.2	3128	1	7	-23	0	23	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	139696328	139693184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139693200_139696300
ES.32207.4	chr7	-	2487	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	-1	375	intron_retention	FALSE	canonical	3	1613	junction_2	102.834278763887	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	139696321	139685247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
ES.32207.5	chr7	-	1532	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	27	-2	27	2	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTTTTTAACTTC	NA	False	NA	1	True	NA	NA	NA	139696362	139685620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32207.6	chr7	-	3176	6	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	1613	junction_2	102.659826611971	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696333	139685622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139692460_139692848_139693047_139696219
ES.32207.8	chr7	-	1514	8	NNC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	584.19919024041	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTGTGTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	139696327	139685624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696198
ES.32207.9	chr7	-	1487	8	NNC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	605.125117775874	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTGTGTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	139696327	139685624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690551_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ES.32208.1	chr7	+	1862	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	-46	2839	-46	51	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACACTGTAGCTGTCT	NA	False	NA	73	True	NA	NA	NA	139705523	139714298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32208.10	chr7	+	1672	7	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	94.5691986501595	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTGTGTAGAGTACTTC	NA	False	NA	21	True	CATAAA	-13	NA	139705596	139714246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706303_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32208.11	chr7	+	4741	5	NNC	ENSMUSG00000025464.16	novel	1024	5	NA	NA	-24	0	intron_retention	FALSE	canonical	3	10	junction_1	108.263567279117	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706303_139707621_139708930_139711673_139712293_139712452_139713922
ES.32208.12	chr7	+	4735	5	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	213	junction_2	22.6315598225133	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139712452_139713922
ES.32208.13	chr7	+	1833	8	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	108.526118364875	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705602	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139710211_139711559_139711673_139712293_139712452_139713922
ES.32208.14	chr7	+	1770	8	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	120.287580575953	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTTGTGTAGAGTACT	NA	False	NA	19	True	CATAAA	-11	NA	139705605	139714244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706303_139706729_139707420_139707621_139708930_139709184_139710109_139710219_139711559_139711673_139712293_139712452_139713922
ES.32208.15	chr7	+	1888	8	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.21108563003	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705606	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139710270_139711559_139711673_139712293_139712452_139713922
ES.32208.16	chr7	+	2290	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	118	2	intron_retention	FALSE	canonical	3	226	junction_1	21.2	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTAGAGTACTTCTCA	NA	False	NA	24	True	CATAAA	-16	NA	139705738	139714249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139705796_139706238_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32208.18	chr7	+	2248	4	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	1222	0	intron_retention	FALSE	canonical	3	250	junction_3	15.9652400197707	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139706842	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139707621_139708930_139709184_139711559_139712452_139713922
ES.32208.2	chr7	+	3075	6	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_3	124.844863730952	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705555	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139707621_139708930_139709184_139710109_139710271_139711559_139711673_139712293_139712452_139713922
ES.32208.4	chr7	+	2204	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	213	junction_1	25.4165300542777	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705573	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32208.5	chr7	+	4682	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	5	-32	5	32	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTTCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139705574	139717169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32208.6	chr7	+	1647	6	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	98.2087572469991	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705574	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139712293_139712452_139713922
ES.32208.7	chr7	+	3196	7	NNC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	89.1099508098469	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705588	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139710109_139711673_139712293_139712452_139713922
ES.32208.8	chr7	+	5254	4	NIC	ENSMUSG00000025464.16	novel	4655	7	NA	NA	20	-2	intron_retention	FALSE	canonical	3	250	junction_3	9.28559218478941	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTGTGTAGAGTACTT	NA	False	NA	20	True	CATAAA	-12	NA	139705589	139714245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139707621_139708930_139711673_139712293_139712452_139713922
ES.32208.9	chr7	+	2873	5	NIC	ENSMUSG00000025464.16	novel	1024	5	NA	NA	-24	0	intron_retention	FALSE	canonical	3	250	junction_4	15.1554445662277	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705596	139714247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ES.32209.1	chr7	-	171	1	Antisense	novelGene_ENSMUSG00000025464.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGAGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	139714450	139714279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_139714300_139714400
ES.3221.1	chr10	-	5059	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	-15	3	-15	-3	multi-exon	FALSE	canonical	2	6	junction_11	3.08823413662964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATGTATTTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	78080490	78022561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
ES.3221.3	chr10	-	4949	23	NNC	ENSMUSG00000000374.9	novel	5047	23	NA	NA	2	-64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.84218644709167	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGTGGAAGTCATAGAT	NA	False	NA	-4	True	AATAAA	-17	NA	78080473	78022622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050618_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
ES.3221.4	chr10	-	5104	21	ISM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	5	5007	5	1289	5prime_fragment	FALSE	canonical	2	6	junction_9	3.1559467676119	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTTTTCATGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	78080470	78027565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
ES.3221.5	chr10	-	3844	3	ISM	ENSMUSG00000000374.9	ENSMUST00000217980.2	676	5	-4	8157	-4	-8157	5prime_fragment	FALSE	canonical	3	15	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78080460	78061177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_78064749_78067287_78067370_78080269
ES.32210.1	chr7	+	1278	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	17	159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.516920509873	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717493	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717645_139720121_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.11	chr7	+	3766	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-20	159	intron_retention	FALSE	non_canonical	0	0	junction_2	157.263245531376	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717541	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139729774_139730067
ES.32210.12	chr7	+	2156	3	NNC	ENSMUSG00000039018.16	novel	2133	3	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	248	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTCTTGTCACTACT	NA	False	NA	NA	False	ATTAAA	-24	NA	139717542	139722052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105
ES.32210.14	chr7	+	3703	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-16	159	intron_retention	FALSE	non_canonical	0	0	junction_2	198.962031553762	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717545	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139728244_139728302_139729774_139730067
ES.32210.15	chr7	+	3003	12	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-16	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	220.782829611453	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717545	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139728244_139728302_139728961_139729660_139729774_139730067
ES.32210.18	chr7	+	4257	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-16	168	intron_retention	FALSE	non_canonical	0	0	junction_1	206.694084202825	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717545	139730528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139728244_139728302_139729774_139730067
ES.32210.2	chr7	+	1401	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	17	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.393783116191	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717493	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.20	chr7	+	3958	2	ISM	ENSMUSG00000039018.16	ENSMUST00000150667.8	2133	3	-15	2	-15	-2	intron_retention	FALSE	canonical	3	496	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGTTCTCTTGTCACT	NA	False	NA	NA	False	ATTAAA	-21	NA	139717546	139722049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_139717687_139718231
ES.32210.21	chr7	+	4036	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-6	159	intron_retention	TRUE	non_canonical	0	0	junction_2	203.608011193622	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717555	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139728219_139728279_139729774_139730067
ES.32210.22	chr7	+	1248	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	4	159	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	151.630480013538	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717565	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139720121_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.23	chr7	+	1337	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-4	158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	201.120461415541	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCTCTCTCTG	NA	False	NA	20	True	AATAAA	-21	NA	139717571	139730518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723635_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.24	chr7	+	1396	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-4	158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	194.011236787976	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCTCTCTCTG	NA	False	NA	20	True	AATAAA	-21	NA	139717571	139730518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717761_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.25	chr7	+	4913	8	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-2	168	intron_retention	FALSE	non_canonical	0	0	junction_2	212.638814204092	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717573	139730528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717761_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139729774_139730067
ES.32210.26	chr7	+	1335	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-1	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	198.275086685141	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717574	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730052
ES.32210.27	chr7	+	4072	9	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	5	159	intron_retention	FALSE	non_canonical	0	0	junction_2	162.599921202318	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717580	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139729774_139730067
ES.32210.28	chr7	+	4266	9	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-3	159	intron_retention	FALSE	non_canonical	0	0	junction_1	211.455041025273	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717872	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139728244_139728302_139729774_139730067
ES.32210.29	chr7	+	1318	11	NNC	ENSMUSG00000039018.16	novel	722	6	NA	NA	5	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.274810249565	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717880	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717991_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.3	chr7	+	2750	2	NNC	ENSMUSG00000039018.16	novel	2133	3	NA	NA	17	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTCTTGTCACTACT	NA	False	NA	NA	False	ATTAAA	-24	NA	139717493	139722052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139718297_139720105
ES.32210.30	chr7	+	1308	11	NNC	ENSMUSG00000039018.16	novel	722	6	NA	NA	6	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	226.35715142226	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717881	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717967_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730052
ES.32210.31	chr7	+	9385	5	NIC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	943	168	intron_retention	FALSE	canonical	3	462	junction_2	18.9917745353087	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139718818	139730528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139723732_139724253_139724311_139724542_139724634_139725910_139729774_139730067
ES.32210.32	chr7	+	4535	8	NIC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-1007	159	intron_retention	FALSE	canonical	3	445	junction_1	29.2463149606153	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139719126	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139729774_139730067
ES.32210.33	chr7	+	4951	7	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	26	158	intron_retention	FALSE	canonical	0	0	junction_5	187.90393526717	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCTCTCTCTG	802	False	NA	20	True	AATAAA	-21	NA	139720159	139730518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139720214_139723650_139723732_139724253_139725973_139726723_139726821_139727165_139728244_139728302_139729774_139730067
ES.32210.4	chr7	+	1938	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	25	159	intron_retention	FALSE	non_canonical	0	0	junction_1	157.516920509873	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717501	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.7	chr7	+	4074	10	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-42	159	intron_retention	TRUE	non_canonical	0	0	junction_2	203.608011193622	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717519	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139728244_139728302_139729774_139730067
ES.32210.8	chr7	+	1371	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-42	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	150.393783116191	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTCTCTCTGG	NA	False	NA	21	True	AATAAA	-22	NA	139717519	139730519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_139717687_139718231_139718299_139720111_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ES.32210.9	chr7	+	4532	1	NIC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	-42	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTCTCTTGTCACTAC	NA	False	NA	NA	False	ATTAAA	-23	NA	139717519	139722051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_139717500_139722100
ES.32211.1	chr7	+	177	1	ISM	ENSMUSG00000025479.10	ENSMUST00000026552.9	1833	9	11060	6	10318	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGCCAAGCATATGG	1145	False	NA	NA	False	NA	NA	NA	140354711	140354888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140354700_140354900
ES.32212.1	chr7	-	1478	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	-19	1	-19	-1	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	140367784	140357142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
ES.32212.10	chr7	-	4330	7	NNC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	5036	-2	intron_retention	FALSE	canonical	0	0	junction_1	63.0361448341787	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140362714	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140358155_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795
ES.32212.11	chr7	-	2876	11	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	1	-3	intron_retention	FALSE	canonical	3	148	junction_5	14.7797158294739	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGGTCTATATTGTGT	NA	False	NA	-3	True	AATAAA	-15	NA	140367749	140357144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140362003_140367648
ES.32212.12	chr7	-	1382	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	47.3902385596844	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGGTCTATATTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	140367754	140357145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140367648
ES.32212.3	chr7	-	1404	12	NNC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.0727122629692	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	140367754	140357142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360787_140360848_140361939_140362003_140367617
ES.32212.4	chr7	-	1411	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	48.9449007127926	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTCTATATTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	140367765	140357142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140360369_140360445_140360787_140360848_140361939_140362003_140367648
ES.32212.5	chr7	-	1360	11	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-25	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	53.3937262232184	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367790	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140367648
ES.32212.6	chr7	-	3297	8	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	148	junction_2	12.5551843101256	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367786	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140362003_140367648
ES.32212.7	chr7	-	1249	10	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	56.1264005571903	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367754	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140367648
ES.32212.8	chr7	-	1414	13	NNC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	46.3269629913294	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367775	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367702
ES.32212.9	chr7	-	2539	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	148	junction_5	15.493533708514	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGTCTATATTGTGTG	NA	False	NA	-2	True	AATAAA	-16	NA	140367754	140357143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140362003_140367648
ES.32213.1	chr7	-	6095	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-4	-2240	-4	0	multi-exon	FALSE	canonical	3	50	junction_1	4	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGATTTCCTTATTTAC	NA	False	NA	NA	False	AATAAA	-20	NA	140402049	140387361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140393228_140398500_140398628_140401947
ES.32213.10	chr7	-	2620	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-36	1267	10	-1267	multi-exon	FALSE	canonical	3	50	junction_1	4	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTATGTATGTGCATG	NA	False	NA	NA	False	AATACA	-24	NA	140402081	140390868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140393228_140398500_140398628_140401947
ES.32213.2	chr7	-	5736	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-26	-1859	-12	-381	multi-exon	FALSE	canonical	3	50	junction_1	4	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATACTTTGCCAGTGC	NA	False	NA	NA	False	AATGAA	-14	NA	140402071	140387742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140393228_140398500_140398628_140401947
ES.32213.3	chr7	-	3944	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	-82	-11	-36	11	multi-exon	FALSE	canonical	3	50	junction_1	4	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTTTTTTTTACAAAT	NA	False	NA	NA	False	NA	NA	NA	140402127	140389590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140393228_140398500_140398628_140401947
ES.32213.4	chr7	-	3977	4	NNC	ENSMUSG00000060314.14	novel	3851	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.8958996814325	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402082	140389601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140393228_140398500_140398585_140399445_140399578_140401947
ES.32213.6	chr7	-	3839	3	NNC	ENSMUSG00000060314.14	novel	3851	3	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTCACATTGGAGT	NA	False	NA	NA	False	NA	NA	NA	140402081	140389606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140393228_140398500_140398585_140401947
ES.32213.7	chr7	-	3906	3	NNC	ENSMUSG00000060314.14	novel	3851	3	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTCACATTGGAGT	NA	False	NA	NA	False	NA	NA	NA	140402082	140389606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140393251_140398500_140398628_140401947
ES.32213.8	chr7	-	4014	4	NNC	ENSMUSG00000060314.14	novel	3851	3	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.8958996814325	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTCACATTGGAGT	NA	False	NA	NA	False	NA	NA	NA	140402081	140389606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140393228_140398500_140398628_140399445_140399578_140401947
ES.32213.9	chr7	-	3968	3	FSM	ENSMUSG00000060314.14	ENSMUST00000150053.3	433	3	15	-3550	1	-6	multi-exon	FALSE	canonical	0	0	junction_1	29	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTTCACATTGGAG	NA	False	NA	NA	False	NA	NA	NA	140402044	140389607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140393228_140398376_140398628_140401947
ES.32214.1	chr7	+	193	1	Intergenic	novelGene_26344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	140408883	140409076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140408900_140409100
ES.32215.1	chr7	-	156	1	Intergenic	novelGene_26345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAAACTTTA	NA	False	NA	NA	False	NA	NA	NA	140409583	140409427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140409400_140409600
ES.32216.1	chr7	+	890	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	-90	-81	-90	2	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTGAACCTATCATTGG	NA	False	NA	29	True	AATAAA	-19	NA	140414840	140417881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
ES.32216.2	chr7	+	812	4	NIC	ENSMUSG00000025481.13	novel	719	4	NA	NA	88	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	111.547697819762	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATCTGAACCTATCAT	NA	False	NA	26	True	AATAAA	-16	NA	140415018	140417878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140415172_140415524_140415665_140416659_140416796_140417495
ES.32216.3	chr7	+	781	4	FSM	ENSMUSG00000025481.13	ENSMUST00000211372.2	688	4	7	-100	0	100	multi-exon	FALSE	canonical	3	6	junction_1	116.448367194316	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGTCTGAGAAAGGG	NA	False	NA	127	True	NA	NA	NA	140415191	140417979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140415316_140415524_140415665_140416659_140416796_140417598
ES.32217.1	chr7	+	3537	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	-641	510	-641	77	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCTGGAATCTCGTTG	NA	False	NA	86	True	NA	NA	NA	140436228	140443133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.10	chr7	+	2353	9	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-28	8	intron_retention	FALSE	non_canonical	0	0	junction_1	87.338064439281	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCATGATTTCCTACA	NA	False	NA	17	True	ATTAAA	-24	NA	140437306	140443064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437479_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.11	chr7	+	2377	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-27	-1	intron_retention	FALSE	canonical	1	1	junction_7	82.0690765960805	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437307	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441128_140441208_140441354_140441752_140441873_140442223
ES.32217.12	chr7	+	4195	5	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-27	0	intron_retention	FALSE	canonical	3	213	junction_1	26.0036055192352	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437307	140443056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140439503_140440789_140440886_140440985_140441131_140441208
ES.32217.13	chr7	+	1951	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	439	1016	-26	95	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGGGTGGTAATGGAG	NA	False	NA	NA	False	CATAAA	-12	NA	140437308	140442627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.14	chr7	+	3288	5	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-25	21	intron_retention	FALSE	canonical	3	213	junction_2	13.1600721882519	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTGAAGTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	140437309	140442553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140439503_140440789
ES.32217.15	chr7	+	6909	11	NNC	ENSMUSG00000025485.14	novel	2577	11	NA	NA	-20	3360	intron_retention	TRUE	canonical	0	0	junction_10	78.4158147314685	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTGATTCTCCACT	NA	False	NA	NA	False	NA	NA	NA	140437314	140447645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223_140443996_140444049
ES.32217.16	chr7	+	2799	8	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-19	-1	intron_retention	FALSE	canonical	0	0	junction_2	91.2279047892962	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437315	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437757_140437806_140437896_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441354_140441752
ES.32217.17	chr7	+	3962	5	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	213	junction_1	26.0228265182705	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGTTTAACATTCAT	NA	False	NA	6	True	ATTAAA	-13	NA	140437325	140443053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140439503_140440789_140440886_140440985
ES.32217.18	chr7	+	2240	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	7	junction_8	80.1981919995707	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437327	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140442223
ES.32217.2	chr7	+	3658	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-549	0	intron_retention	FALSE	canonical	3	213	junction_1	24.9446261747896	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140436320	140443056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.20	chr7	+	2262	11	FSM	ENSMUSG00000025485.14	ENSMUST00000210708.2	2577	11	-32	347	-3	-1	multi-exon	FALSE	canonical	1	3	junction_3	77.5539167289441	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437331	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140437468_140437757_140437806_140437894_140438186_140438279_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.21	chr7	+	2453	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_1	82.425873919286	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437331	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437660_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.22	chr7	+	3473	6	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	213	junction_1	24.2767378368676	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437332	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985
ES.32217.23	chr7	+	2355	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-2	8	intron_retention	FALSE	canonical	1	2	junction_3	81.7064906680243	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCATGATTTCCTACA	NA	False	NA	17	True	ATTAAA	-24	NA	140437332	140443064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437757_140437806_140437894_140438477_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.24	chr7	+	3394	7	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	213	junction_1	22.1935926689564	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437333	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208
ES.32217.25	chr7	+	3418	7	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	213	junction_1	26.7207784317748	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437333	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.27	chr7	+	2336	10	NIC	ENSMUSG00000025485.14	novel	2577	11	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	3	junction_3	81.4672546502392	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGTTTAACATTCAT	NA	False	NA	6	True	ATTAAA	-13	NA	140437333	140443053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437468_140437757_140437806_140437894_140438186_140438279_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441354_140441752_140441873_140442223
ES.32217.28	chr7	+	3584	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	466	-644	1	2	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCCTTAAGAACCAAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	140437335	140444287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.29	chr7	+	1918	9	NIC	ENSMUSG00000025485.14	novel	2577	11	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	85.4093086261679	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437336	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437468_140438279_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.3	chr7	+	3966	8	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-507	-1	intron_retention	FALSE	canonical	3	213	junction_1	25.1947516400555	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140436362	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752
ES.32217.30	chr7	+	2421	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_1	82.425873919286	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTGTTTAACATTCAT	NA	False	NA	6	True	ATTAAA	-13	NA	140437336	140443053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437540_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.31	chr7	+	1855	9	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	2	64	intron_retention	FALSE	non_canonical	0	0	junction_1	87.338064439281	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGCCCTGGCACATAAA	NA	False	NA	NA	False	NA	NA	NA	140437336	140442596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437479_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.32	chr7	+	2380	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	82.425873919286	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437357	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437518_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.33	chr7	+	2381	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_1	82.425873919286	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437358	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437705_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.34	chr7	+	4957	1	Genic_Genomic	ENSMUSG00000025485.14	novel	NA	NA	NA	NA	805	2562	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140441890	140446847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_140441900_140446800
ES.32217.4	chr7	+	1981	9	NNC	ENSMUSG00000025485.14	novel	2272	8	NA	NA	-470	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.338064439281	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140436399	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140436594_140438279_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32217.5	chr7	+	3646	8	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-460	-1	intron_retention	FALSE	canonical	3	213	junction_1	26.5422266571282	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140436409	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441354_140441752_140441873_140442223
ES.32217.6	chr7	+	3586	7	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-78	0	intron_retention	FALSE	canonical	0	0	junction_3	93.8183824678772	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437149	140443056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437806_140437894_140438486_140438775_140438875_140439351_140439503_140440789_140440886_140440985_140441131_140441208
ES.32217.7	chr7	+	2220	10	NNC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-72	-132	intron_retention	FALSE	canonical	2	4	junction_8	78.8373853785964	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATTGTTTAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	140437155	140442740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441749_140441873_140442223
ES.32217.8	chr7	+	3216	7	ISM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	430	588	-35	-1	intron_retention	FALSE	canonical	3	213	junction_2	22.1660400913951	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437299	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985
ES.32217.9	chr7	+	2671	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	213	junction_2	25.0670974586209	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTTTAACATTCATGA	NA	False	NA	8	True	ATTAAA	-15	NA	140437306	140443055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140437468_140437757_140437806_140437894_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ES.32218.1	chr7	+	2683	1	Antisense	novelGene_ENSMUSG00000025486.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAATTTGTACATTATA	NA	False	NA	NA	False	NA	NA	NA	140457750	140460433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_140457800_140460400
ES.32219.1	chr7	+	2038	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	-35	-14	-35	13	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCCTTAGCTCCTT	NA	False	NA	42	True	AATAAA	-30	NA	140461845	140478569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ES.32219.10	chr7	+	2020	11	NNC	ENSMUSG00000025487.16	novel	1391	11	NA	NA	4	0	intron_retention	FALSE	canonical	2	43	junction_6	374.456739824509	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCTTCTGTTCTTT	NA	False	NA	29	True	AATAAA	-17	NA	140462345	140478556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469300_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329
ES.32219.11	chr7	+	1988	12	ISM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	469	0	8	0	intron_retention	FALSE	canonical	3	1065	junction_10	114.640004267762	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462349	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520
ES.32219.12	chr7	+	3690	12	NIC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1065	junction_9	112.657823181379	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCTTCTGTTCTTT	NA	False	NA	29	True	AATAAA	-17	NA	140462379	140478556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ES.32219.13	chr7	+	1563	14	NNC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	461.948856002621	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCTTCTGTTCTTT	NA	False	NA	29	True	AATAAA	-17	NA	140462391	140478556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140475938_140476023_140477329_140477411_140477520_140477638_140478105
ES.32219.14	chr7	+	1175	6	FSM	ENSMUSG00000025487.16	ENSMUST00000140411.8	599	6	79	-655	36	655	multi-exon	FALSE	canonical	3	1147	junction_5	133.449016481951	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	140462420	140467833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931
ES.32219.15	chr7	+	3169	4	NIC	ENSMUSG00000025487.16	novel	1391	11	NA	NA	-2760	2544	intron_retention	FALSE	canonical	3	1147	junction_1	66.1379030679248	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAGTCCATTATCAT	NA	False	NA	NA	False	NA	NA	NA	140466552	140472176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140466759_140466931_140467019_140469217_140470325_140470407
ES.32219.16	chr7	+	4949	1	FSM	ENSMUSG00000083396.2	ENSMUST00000121585.2	1194	1	-3592	-163	-3592	163	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140467207	140472156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140467200_140472200
ES.32219.17	chr7	+	3406	3	ISM	ENSMUSG00000025487.16	ENSMUST00000130462.8	1215	6	-1480	6132	-1480	2544	5prime_fragment	FALSE	canonical	3	1152	junction_1	26.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAGTCCATTATCAT	NA	False	NA	NA	False	NA	NA	NA	140467832	140472176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140469390_140470244_140470325_140470407
ES.32219.18	chr7	+	7086	3	ISM	ENSMUSG00000083396.2_ENSMUSG00000025487.16	ENSMUST00000165539.2	288	4	-5941	1	-826	0	intron_retention	FALSE	canonical	3	1065	junction_1	98	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140468486	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140474457_140477329_140477411_140477520
ES.32219.3	chr7	+	5599	6	NIC	ENSMUSG00000025487.16	novel	1391	11	NA	NA	-15	2	intron_retention	FALSE	canonical	3	1065	junction_5	78.0317883942179	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGCTTCTGTTCTTTGC	NA	False	NA	31	True	AATAAA	-19	NA	140462311	140478558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140462480_140463412_140463492_140466300_140466759_140466931_140470534_140474393_140474457_140477329
ES.32219.4	chr7	+	3072	9	NIC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1065	junction_8	129.591425256457	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462313	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140470534_140474393_140474457_140477329
ES.32219.5	chr7	+	4676	10	NIC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1065	junction_7	120.643132552577	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGGTGCTTCTGTTCT	NA	False	NA	27	True	AATAAA	-15	NA	140462329	140478554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ES.32219.6	chr7	+	1460	12	NIC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	376.276076771316	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462329	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ES.32219.7	chr7	+	1589	4	FSM	ENSMUSG00000025487.16	ENSMUST00000146875.8	797	4	-50	-742	3	655	multi-exon	FALSE	canonical	3	1147	junction_3	64.8553947040816	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	140462329	140467833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140462480_140463412_140463492_140466300_140466759_140466931
ES.32219.8	chr7	+	2118	11	FSM	ENSMUSG00000025487.16	ENSMUST00000151644.8	1391	11	3	-730	3	0	multi-exon	FALSE	canonical	3	1065	junction_10	119.9970416302	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462329	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329
ES.32219.9	chr7	+	5860	9	NIC	ENSMUSG00000025487.16	novel	1989	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	1065	junction_8	131.34633369455	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140462329	140478555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329
ES.3222.1	chr10	+	2652	1	Antisense	novelGene_ENSMUSG00000001211.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACAACCGAGCCCTCG	NA	False	NA	NA	False	AAGAAA	-10	NA	78184961	78187613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78185000_78187600
ES.32220.1	chr7	-	2683	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	807	-1222	15	1222	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGGTCCTTGCCCTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	140436215	140432084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ES.32220.2	chr7	-	1468	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	791	9	-1	-9	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCGTGCCCGTCTCTA	NA	False	NA	-19	True	CATAAA	-22	NA	140436231	140433315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ES.32220.3	chr7	-	3383	1	FSM	ENSMUSG00000025484.10	ENSMUST00000210157.2	1882	1	-521	-980	318	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGAAGTTCCGTGCCCG	NA	False	NA	-25	True	CATAAA	-16	NA	140436704	140433321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140433300_140436700
ES.32220.4	chr7	-	1853	2	NIC	ENSMUSG00000025484.10	novel	386	4	NA	NA	0	-16	intron_retention	FALSE	canonical	3	111	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGAAGTTCCGTGCCC	NA	False	NA	-26	True	CATAAA	-15	NA	140436230	140433322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140435079_140436133
ES.32220.5	chr7	-	1569	5	ISM	ENSMUSG00000025484.10	ENSMUST00000211624.2	769	7	1061	-962	16	-16	3prime_fragment	FALSE	canonical	1	1	junction_4	52.5404605994276	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGAAGTTCCGTGCCC	NA	False	NA	-26	True	CATAAA	-15	NA	140436214	140433322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140434537_140434677_140434735_140434986_140435079_140435718_140435844_140436133
ES.32220.6	chr7	-	1538	4	FSM	ENSMUSG00000025484.10	ENSMUST00000209320.2	386	4	37	-1189	4	-17	multi-exon	FALSE	canonical	0	0	junction_2	52.0917993119412	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTATGAAGTTCCGTGCC	NA	False	NA	-27	True	CATAAA	-14	NA	140436193	140433323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140434537_140434677_140434851_140434986_140435079_140436133
ES.32220.7	chr7	-	2036	3	NNC	ENSMUSG00000025484.10	novel	2268	4	NA	NA	338	-17	intron_retention	FALSE	canonical	2	2	junction_1	54.5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTATGAAGTTCCGTGCC	NA	False	NA	-27	True	CATAAA	-14	NA	140436684	140433323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140434735_140435004_140435079_140436133
ES.32220.8	chr7	-	4630	3	ISM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	-1324	17	-856	-17	intron_retention	FALSE	canonical	3	105	junction_2	2.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTATGAAGTTCCGTGCC	NA	False	NA	-27	True	CATAAA	-14	NA	140438346	140433323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140434537_140434677_140434735_140434986
ES.32220.9	chr7	-	435	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	840	993	1	2	multi-exon	FALSE	canonical	3	105	junction_2	2.62466929133727	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	140436182	140434299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ES.32221.1	chr7	-	5722	6	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	4	2	intron_retention	FALSE	canonical	3	125	junction_5	43.5862363596583	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTTTGGGATAG	NA	False	NA	-8	True	AATAAA	-20	NA	140461778	140443576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140443997_140444887_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ES.32221.11	chr7	-	1168	6	NNC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	94.7628619238571	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTGGCATCCTGTCT	NA	False	NA	-19	True	AATAAA	-9	NA	140461730	140443587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457803_140461684
ES.32221.12	chr7	-	1329	7	NNC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-38	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.280402960129	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTGGCATCCTGTCT	NA	False	NA	-19	True	AATAAA	-9	NA	140462260	140443587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456370_140457562_140457796_140457869_140458059_140462237
ES.32221.14	chr7	-	1302	4	FSM	ENSMUSG00000025486.18	ENSMUST00000210974.2	1272	4	-40	10	2	-10	multi-exon	FALSE	canonical	3	125	junction_3	50.4050262044041	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGGAAGAAGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	140461780	140455592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140456368_140457562_140457796_140457869_140458059_140461675
ES.32221.2	chr7	-	1406	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	16	-6	16	2	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTCTCTTTGGGATAG	NA	False	NA	-8	True	AATAAA	-20	NA	140461766	140443576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ES.32221.3	chr7	-	1229	6	NNC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.6434023554835	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTCTTTGGGATA	NA	False	NA	-9	True	AATAAA	-19	NA	140461750	140443577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140443997_140444887_140445098_140456264_140456368_140457562_140457796_140457869_140458059_140461675
ES.32221.4	chr7	-	1331	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	76.8188706561668	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTCTTTGGGATA	NA	False	NA	-9	True	AATAAA	-19	NA	140461786	140443577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140457965_140461675
ES.32221.5	chr7	-	1453	7	FSM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	12	-4	-1	0	multi-exon	FALSE	canonical	3	24	junction_6	79.4187215543875	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	140462210	140443578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
ES.32221.6	chr7	-	5400	6	ISM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	77	-4	57	0	intron_retention	FALSE	canonical	3	226	junction_4	7.05974503788912	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGTCTCTTTGGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	140462145	140443578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869
ES.32221.7	chr7	-	1409	7	NIC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	62.3475919520732	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	-11	True	AATAAA	-17	NA	140461780	140443579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458051_140461675
ES.32221.8	chr7	-	1238	7	NNC	ENSMUSG00000025486.18	novel	1416	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.991137192093	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCCTGTCTCTTTGGGA	NA	False	NA	-11	True	AATAAA	-17	NA	140461779	140443579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140443997_140444887_140445098_140449401_140449480_140456266_140456368_140457562_140457796_140457869_140457965_140461675
ES.32222.1	chr7	-	326	2	FSM	ENSMUSG00000025488.10	ENSMUST00000026561.10	360	2	34	0	34	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCTCGTGCAGATTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	140480325	140478857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140479003_140480144
ES.32223.1	chr7	-	160	1	Intergenic	novelGene_26346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	2981	False	NA	NA	False	NA	NA	NA	140504448	140504288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140504300_140504400
ES.32224.1	chr7	+	3026	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	-49	4	-16	2	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	11	True	ATTAAA	-23	NA	140521444	140527573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.10	chr7	+	4919	8	NIC	ENSMUSG00000062031.14	novel	3145	13	NA	NA	14	2	intron_retention	FALSE	canonical	3	46	junction_2	7.06818107248742	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	11	True	ATTAAA	-23	NA	140521507	140527573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140522479_140522898_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243
ES.32224.11	chr7	+	2792	13	NNC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.4998522453984	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGATGGATTCAT	NA	False	NA	14	True	ATTAAA	-26	NA	140521520	140527576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526455_140526627_140526701
ES.32224.12	chr7	+	2956	11	NNC	ENSMUSG00000062031.14	novel	3145	13	NA	NA	-71	-6	intron_retention	FALSE	canonical	0	0	junction_4	26.7097360526082	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGTCAGAGTGT	NA	False	NA	1	True	ATTAAA	-13	NA	140522196	140527563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524833_140525263_140525367_140525441_140525538_140525676_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.13	chr7	+	2469	12	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	-71	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.1317971427875	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGTCAGAGTGT	NA	False	NA	1	True	ATTAAA	-13	NA	140522196	140527563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140522479_140522898_140523110_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.14	chr7	+	3141	11	NIC	ENSMUSG00000062031.14	novel	3145	13	NA	NA	-71	0	intron_retention	FALSE	canonical	3	43	junction_3	10.3773792452623	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	False	NA	9	True	ATTAAA	-21	NA	140522196	140527571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526627_140526701
ES.32224.15	chr7	+	2946	10	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	1326	0	intron_retention	FALSE	canonical	3	46	junction_1	11.0252236056942	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140523593	140527569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.16	chr7	+	2947	3	NIC	ENSMUSG00000062031.14	novel	3001	14	NA	NA	2041	0	intron_retention	FALSE	canonical	3	46	junction_1	11	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140524308	140527569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140524678_140524863_140526116_140526243
ES.32224.18	chr7	+	4830	1	Genic_Genomic	ENSMUSG00000062031.14	novel	NA	NA	NA	NA	5018	4538	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACATCTCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	140527285	140532115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_140527300_140532100
ES.32224.2	chr7	+	3126	13	NIC	ENSMUSG00000062031.14	novel	3001	14	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_12	18.2959846839561	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCAGAGTGTGTGATGG	NA	False	NA	8	True	ATTAAA	-20	NA	140521491	140527570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526706
ES.32224.3	chr7	+	3235	12	NIC	ENSMUSG00000062031.14	novel	3145	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	12.1750320311151	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	False	NA	9	True	ATTAAA	-21	NA	140521493	140527571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.5	chr7	+	2848	13	NIC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	19.2806393969587	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	11	True	ATTAAA	-23	NA	140521502	140527573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.6	chr7	+	3213	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	10	-242	10	242	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGTAGGTGGTCAC	NA	False	NA	NA	False	AATAGA	-29	NA	140521503	140527819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ES.32224.7	chr7	+	2975	14	NNC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.070211520032	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521503	140527569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526402_140526627_140526701
ES.32224.8	chr7	+	2926	14	NNC	ENSMUSG00000062031.14	novel	2981	14	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.070211520032	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGTGATGGATT	NA	False	NA	11	True	ATTAAA	-23	NA	140521503	140527573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526455_140526627_140526701
ES.32224.9	chr7	+	4423	11	NNC	ENSMUSG00000062031.14	novel	3145	13	NA	NA	14	-2	intron_retention	FALSE	canonical	0	0	junction_9	20.2457402927134	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGTCAGAGTGTGTGA	NA	False	NA	5	True	ATTAAA	-17	NA	140521507	140527567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140521557_140522197_140523110_140523189_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526455_140526627_140526701
ES.32225.1	chr7	-	550	1	NIC	ENSMUSG00000025489.6	novel	765	2	NA	NA	779	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGTGGGCTCTTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	140529425	140528875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140528900_140529400
ES.32226.1	chr7	-	4777	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	28	-4150	28	4150	multi-exon	FALSE	canonical	3	9574	junction_1	0	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAACTTTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	140535872	140530599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140535087_140535582
ES.32226.2	chr7	-	1023	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	-352	-16	-352	16	multi-exon	FALSE	canonical	3	9574	junction_1	0	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCTGTACCGAGCT	NA	False	NA	4	True	AATAAA	-38	NA	140536252	140534733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140535087_140535582
ES.32226.3	chr7	-	1139	1	NIC	ENSMUSG00000060591.10	novel	655	2	NA	NA	12	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	883	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535888	140534749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140534700_140535900
ES.32226.6	chr7	-	505	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	44	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGCTGTGACTCACT	NA	False	NA	-19	True	AATAAA	-15	NA	140535856	140534756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140535027_140535621
ES.32226.7	chr7	-	620	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	883	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGGCTGTGACTCA	NA	False	NA	-21	True	AATAAA	-13	NA	140535880	140534758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140535087_140535588
ES.32226.8	chr7	-	490	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	22	143	22	-143	multi-exon	FALSE	canonical	3	9574	junction_1	0	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCACGGTCCACAT	NA	False	NA	NA	False	NA	NA	NA	140535878	140534892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140535087_140535582
ES.32227.1	chr7	+	643	3	FSM	ENSMUSG00000025491.15	ENSMUST00000106040.8	560	3	-81	-2	-81	2	multi-exon	FALSE	canonical	2	4	junction_1	567.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTCCTGTGTTGAGTTC	NA	False	NA	26	True	AATAAA	-30	NA	140547859	140549740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140547965_140548152_140548352_140549401
ES.32227.2	chr7	+	585	3	NNC	ENSMUSG00000025491.15	novel	736	2	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	552	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAGTCCTGTGTTGA	NA	False	NA	22	True	AATAAA	-26	NA	140547985	140549736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140548037_140548152_140548352_140549401
ES.32227.3	chr7	+	693	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	45	-2	45	2	multi-exon	FALSE	canonical	3	1139	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTCCTGTGTTGAGTTC	NA	False	NA	26	True	AATAAA	-30	NA	140547997	140549740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140548352_140549401
ES.32227.4	chr7	+	1706	1	NIC	ENSMUSG00000025491.15	novel	882	3	NA	NA	65	-15	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCTGCCCCTGGACT	NA	False	NA	9	True	AATAAA	-13	NA	140548017	140549723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140548000_140549700
ES.32228.1	chr7	+	184	1	Intergenic	novelGene_26347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	140564191	140564375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140564200_140564400
ES.32229.1	chr7	+	143	1	Intergenic	novelGene_26348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140586742	140586885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140586700_140586900
ES.3223.1	chr10	-	2163	14	Fusion	ENSMUSG00000112433.2_ENSMUSG00000001211.16	novel	5980	10	NA	NA	88	-2	multi-exon	FALSE	canonical	0	0	junction_1	218.174540626341	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCTGGCTTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	78188188	78084715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_78085088_78095637_78095751_78098904_78099040_78099424_78099609_78109485_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78188046
ES.3223.10	chr10	-	5239	10	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	68	-614	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	149.159703955025	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAGTGCTCTACTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	78188208	78105625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78188046
ES.3223.11	chr10	-	7253	1	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	1390	-616	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTGTAGTGCTCTACT	NA	False	NA	NA	False	ATTAAA	-22	NA	78112880	78105627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78105600_78112900
ES.3223.12	chr10	-	5262	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	-55	-622	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	187.782214280267	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAAGAGCTGTAGTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	78187942	78105633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78187460_78187546_78187834
ES.3223.13	chr10	-	5795	5	NIC	ENSMUSG00000001211.16	novel	3678	9	NA	NA	502	-640	intron_retention	FALSE	canonical	3	461	junction_3	13.3111795119741	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAGTTACTTGATTC	NA	False	NA	NA	False	ACTAAA	-13	NA	78120709	78105651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78119083_78120022
ES.3223.14	chr10	-	3692	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-85	2373	-38	12	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTTTCCTTCACAC	NA	False	NA	-1	True	AATAAA	-17	NA	78188361	78107384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.16	chr10	-	3788	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	37	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	188.403821617291	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188239	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78156492_78156629_78165109_78165171_78187460_78187546_78188046
ES.3223.17	chr10	-	3777	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	92	9	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	150.89599066907	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188184	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187866
ES.3223.18	chr10	-	2554	13	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	79	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.544243760106	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188197	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78107431_78108578_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78175667_78175819_78187460_78187546_78188046
ES.3223.19	chr10	-	3879	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	8	9	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	182.275651756181	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188315	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78175667_78175819_78187460_78187546_78188046
ES.3223.2	chr10	-	3519	1	FSM	ENSMUSG00000112300.2	ENSMUST00000218207.2	1545	1	-1972	-2	-1972	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAACATCTCTTCTTT	NA	False	NA	NA	False	TATAAA	-29	NA	78103881	78100362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78100400_78103900
ES.3223.21	chr10	-	3452	10	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	-9058	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.464085683357	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	4177	False	NA	-4	True	AATAAA	-14	NA	78165582	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78165504
ES.3223.22	chr10	-	3655	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105389.8	3678	9	32	-9	32	9	multi-exon	FALSE	canonical	0	0	junction_8	155.257044928725	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78134000	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78133658
ES.3223.23	chr10	-	3748	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-12	9	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188335	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.24	chr10	-	3674	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	153.416426760631	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTTTTCCTTCA	NA	False	NA	-4	True	AATAAA	-14	NA	78188049	78107387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187834
ES.3223.25	chr10	-	3557	11	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	112	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	184.728882419615	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTCTCTTTTTCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	78188164	78107389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78183271_78183339_78188046
ES.3223.26	chr10	-	3451	10	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	92	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	149.159703955025	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTCTCTTTTTCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	78188184	78107389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78188046
ES.3223.27	chr10	-	3866	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-19	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	183.145473498009	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTCTCTTTTTCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	78188342	78107389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78175667_78175781_78187460_78187546_78188046
ES.3223.28	chr10	-	3538	10	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	46	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.220599681554	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTTTTTCTCTTTTTCC	NA	False	NA	-8	True	AATAAA	-10	NA	78188230	78107391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109919_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120183_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.29	chr10	-	3334	9	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	93	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	157.640215363974	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGCTTTTTCTCTTTT	NA	False	NA	-11	True	AATAAA	-7	NA	78188183	78107394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78123680_78123908_78165109_78165171_78188046
ES.3223.3	chr10	-	6005	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-21	-4	-21	4	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGCCTCTTTTTCTTT	NA	False	NA	1	True	CATAAA	-26	NA	78188297	78105007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.30	chr10	-	3780	9	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	113	2	intron_retention	FALSE	canonical	3	264	junction_8	66.4519328161341	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATGCTTTTTCTCTTTT	NA	False	NA	-11	True	AATAAA	-7	NA	78188163	78107394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.31	chr10	-	3803	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	96	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.613396151221	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	False	NA	-12	True	AATAAA	-6	NA	78188180	78107395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120016_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187834
ES.3223.32	chr10	-	3711	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	160.190012173044	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78188366	78107396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.34	chr10	-	3357	9	NNC	ENSMUSG00000001211.16	novel	3678	9	NA	NA	-4463	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	155.257044928725	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78147847	78107396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78147794
ES.3223.35	chr10	-	3504	10	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	114	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	161.365010664229	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATAATGCTTTTTCTCT	NA	False	NA	-14	True	AATAAA	-4	NA	78188162	78107397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78187460_78187546_78188046
ES.3223.37	chr10	-	3392	10	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-114	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	166.909156928752	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAATGCTTTTTCTC	NA	False	NA	-15	True	AATAAA	-3	NA	78188160	78107398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.38	chr10	-	3479	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	1	2500	1	-115	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTGGGCTTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	78188275	78107511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.39	chr10	-	3471	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	92	-117	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTGTGGGCTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	78188184	78107513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.40	chr10	-	1701	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	92	4187	92	246	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTTTATTATCAGTTA	NA	False	NA	NA	False	NA	NA	NA	78188184	78109198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.41	chr10	-	1680	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-119	4419	-72	14	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGACTATTTTTCTTAT	NA	False	NA	-4	True	ATTAAA	-34	NA	78188395	78109430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.42	chr10	-	1664	12	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	92	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	206.08262805675	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAGACTATTTTTCTTA	NA	False	NA	-5	True	ATTAAA	-33	NA	78188184	78109431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78181808_78181938_78183271_78183339_78188046
ES.3223.43	chr10	-	1694	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-3	12	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAGACTATTTTTCTT	NA	False	NA	-6	True	ATTAAA	-32	NA	78188326	78109432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.44	chr10	-	1745	11	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	12	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	184.336214564583	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAGACTATTTTTCTT	NA	False	NA	-6	True	ATTAAA	-32	NA	78188311	78109432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78175667_78175819_78188046
ES.3223.45	chr10	-	1605	11	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	88	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	187.014999398444	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAGAGACTATTTTTC	NA	False	NA	-8	True	ATTAAA	-30	NA	78188188	78109434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78156492_78156629_78165109_78165171_78188046
ES.3223.46	chr10	-	1681	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	91	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	188.403821617291	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188185	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78156492_78156629_78165109_78165171_78187460_78187546_78188046
ES.3223.47	chr10	-	5781	8	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	95	4	intron_retention	FALSE	canonical	3	187	junction_7	124.887868073071	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188181	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78120185_78120828_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.48	chr10	-	1594	11	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	79	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	153.669417907403	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188197	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187583_78188046
ES.3223.49	chr10	-	1694	12	NNC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	93	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	182.275651756181	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188183	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78175667_78175819_78187460_78187546_78188046
ES.3223.5	chr10	-	5965	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	185.977310444043	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTCTCTGCCTCTTTTT	NA	False	NA	-3	True	CATAAA	-22	NA	78188055	78105011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78187460_78187546_78187866
ES.3223.50	chr10	-	1594	11	NNC	ENSMUSG00000001211.16	novel	3681	11	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	150.89599066907	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188054	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187866
ES.3223.51	chr10	-	1301	9	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	80	4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	157.640215363974	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188196	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78123680_78123908_78165109_78165171_78188046
ES.3223.52	chr10	-	1411	10	NIC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	81	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	149.159703955025	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACACTTAGAGACTA	NA	False	NA	-14	True	ATTAAA	-24	NA	78188195	78109440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78188046
ES.3223.54	chr10	-	1468	10	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	73	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	152.639088565232	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGACACTTAGAGACT	NA	False	NA	-15	True	ATTAAA	-23	NA	78188203	78109441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120837_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.56	chr10	-	1797	11	NNC	ENSMUSG00000001211.16	novel	5980	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	184.928878220791	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGACACTTAGAGAC	NA	False	NA	-16	True	ATTAAA	-22	NA	78188321	78109442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78175577_78175781_78188046
ES.3223.57	chr10	-	1317	9	NNC	ENSMUSG00000001211.16	novel	3678	9	NA	NA	-4469	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	155.257044928725	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGACACTTAGAGAC	NA	False	NA	-16	True	ATTAAA	-22	NA	78147853	78109442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78147794
ES.3223.58	chr10	-	1268	8	ISM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	93	8654	93	-4218	5prime_fragment	FALSE	canonical	3	264	junction_7	67.5900004680079	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTGTGCAACAGCG	NA	False	NA	NA	False	GATAAA	-16	NA	78188183	78113665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.59	chr10	-	1352	9	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	93	-4219	combination_of_known_junctions	FALSE	canonical	3	187	junction_8	114.890980934101	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGTGTGTGCAACAGC	NA	False	NA	NA	False	GATAAA	-15	NA	78188183	78113666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.6	chr10	-	5819	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	160.190012173044	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTCTCTGCCTCTTTTT	NA	False	NA	-3	True	CATAAA	-22	NA	78188089	78105011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120940_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.60	chr10	-	4745	3	NIC	ENSMUSG00000001211.16	novel	642	4	NA	NA	-47	-316	intron_retention	FALSE	canonical	3	264	junction_2	80.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACATGCTTGCCGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	78188093	78119270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78123908_78165109_78165171_78188046
ES.3223.61	chr10	-	2455	1	Intergenic	novelGene_2525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	90	False	NA	NA	False	NA	NA	NA	78169669	78167214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78167200_78169700
ES.3223.7	chr10	-	5972	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTCTCTGCCTCTTTTT	NA	False	NA	-3	True	CATAAA	-22	NA	78188183	78105011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.3223.8	chr10	-	5427	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	-59	612	-12	-612	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTGCTCTACTTGTA	NA	False	NA	NA	False	ATTAAA	-26	NA	78188335	78105623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ES.3223.9	chr10	-	5510	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	-12	-614	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAGTGCTCTACTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	78188335	78105625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
ES.32230.1	chr7	-	1255	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	-580	3	-580	-3	multi-exon	FALSE	canonical	3	1854	junction_1	0	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGACTGCTTTTATTC	NA	False	NA	-1	True	AATAAA	-20	NA	140591263	140589501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140589803_140590309
ES.32231.1	chr7	+	162	1	Intergenic	novelGene_26349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	140600258	140600420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140600300_140600400
ES.32232.1	chr7	+	192	1	Intergenic	novelGene_26350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140607190	140607382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140607200_140607400
ES.32233.1	chr7	-	195	1	Intergenic	novelGene_26351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140615807	140615612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140615600_140615800
ES.32234.1	chr7	+	3803	2	FSM	ENSMUSG00000109703.2	ENSMUST00000211011.2	765	2	41	-3079	41	3079	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCATGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	140631542	140636014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140632158_140632826
ES.32235.1	chr7	-	177	1	Intergenic	novelGene_26352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAACTACT	NA	False	NA	NA	False	NA	NA	NA	140634358	140634181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140634200_140634400
ES.32236.1	chr7	+	3708	21	NNC	ENSMUSG00000055629.6	novel	3076	16	NA	NA	-844	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.3159033204274	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640172	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140640396_140640516_140640768_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.10	chr7	+	3645	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-143	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	46.9043938311201	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640873	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647486_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.11	chr7	+	7453	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-137	0	intron_retention	TRUE	non_canonical	0	0	junction_13	62.1494936164946	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640879	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649140_140649374_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.12	chr7	+	2654	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-136	3480	-136	-1932	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCATCTCTCCTCACT	NA	False	NA	NA	False	NA	NA	NA	140640880	140648833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.13	chr7	+	3712	19	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-136	-8	intron_retention	FALSE	canonical	0	0	junction_1	49.1302124743805	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGACTTGTTTTCTGT	NA	False	NA	16	True	AATGAA	-17	NA	140640880	140652305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641273_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.14	chr7	+	5208	19	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-136	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	63.7136001141528	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640880	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.15	chr7	+	2684	14	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-136	-1935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.2288056911771	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGACTTCATCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	140640880	140648830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647399_140647534_140647612_140647714_140647785
ES.32236.16	chr7	+	3625	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-136	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8719436798815	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTCTGTGAGTGT	NA	False	NA	22	True	AATGAA	-23	NA	140640880	140652311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641273_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.17	chr7	+	2421	14	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-135	-1940	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	49.2460312881468	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGACTGACTTCATCTC	NA	False	NA	NA	False	NA	NA	NA	140640881	140648825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641114_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.18	chr7	+	3466	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-135	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	45.4790445183791	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640881	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641114_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.19	chr7	+	5204	19	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-135	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	73.2546926824487	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640881	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651918
ES.32236.2	chr7	+	5274	11	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-190	-1935	intron_retention	FALSE	canonical	3	174	junction_5	12.3596116443843	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGACTTCATCTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	140640826	140648830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140643854_140644190_140644287_140644372_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.20	chr7	+	7452	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-135	0	intron_retention	TRUE	non_canonical	0	0	junction_13	62.1494936164946	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640881	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649157_140649390_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.21	chr7	+	3756	21	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-128	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.2022058426002	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640888	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646266_140646342_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.22	chr7	+	3649	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-126	-8	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_12	44.7035169995937	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGACTTGTTTTCTGT	NA	False	NA	16	True	AATGAA	-17	NA	140640890	140652305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647509_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.23	chr7	+	3912	19	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-126	2	-126	-2	intron_retention	FALSE	canonical	3	132	junction_14	20.2810499642972	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTCTGTGAGTGT	NA	False	NA	22	True	AATGAA	-23	NA	140640890	140652311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549
ES.32236.24	chr7	+	3706	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-124	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	47.8552758201509	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640892	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647212_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.25	chr7	+	2915	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-123	3206	-123	-1658	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTCTGTTCATTGTC	NA	False	NA	NA	False	NA	NA	NA	140640893	140649107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.26	chr7	+	7385	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-123	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.9745417108001	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640893	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140643495_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650225_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.28	chr7	+	5026	21	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	60.5759027997107	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640894	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.29	chr7	+	5288	10	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-1939	intron_retention	FALSE	canonical	3	174	junction_4	11.5416583099315	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTGACTTCATCTCT	NA	False	NA	NA	False	NA	NA	NA	140640894	140648826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140643854_140644190_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.3	chr7	+	3679	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-189	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.8386021530278	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640827	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651185_140651275_140651549_140651677_140651908
ES.32236.30	chr7	+	3771	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	0	intron_retention	FALSE	canonical	3	132	junction_14	21.9077752700714	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640894	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.31	chr7	+	5406	18	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-3	intron_retention	FALSE	canonical	3	174	junction_7	16.0768052740608	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640894	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.32	chr7	+	2717	13	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-1930	intron_retention	FALSE	canonical	3	174	junction_6	13.1708854000869	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATCTCTCCTCACTGC	NA	False	NA	NA	False	NA	NA	NA	140640894	140648835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.34	chr7	+	6089	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-1	intron_retention	FALSE	canonical	3	132	junction_13	21.5715862498179	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640894	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.35	chr7	+	3814	21	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	61.2022058426002	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640894	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646266_140646406_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.36	chr7	+	3802	14	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-118	2314	-118	-766	5prime_fragment	FALSE	canonical	3	174	junction_7	12.6579955787244	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACAGCTTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	140640898	140649999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.37	chr7	+	5092	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-107	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	62.1484238963289	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTCTGTGAGTGT	NA	False	NA	22	True	AATGAA	-23	NA	140640909	140652311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.38	chr7	+	2030	8	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-107	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.8290568903687	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640909	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641030_140647958_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.39	chr7	+	3449	16	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-106	-807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	65.6794911335004	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGGGGCCTGCTCCG	NA	False	NA	NA	False	AATAAA	-19	NA	140640910	140649958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370
ES.32236.4	chr7	+	3745	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-189	0	-189	0	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640827	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.40	chr7	+	5177	18	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-106	-3	intron_retention	FALSE	canonical	3	12	junction_1	46.3350219170701	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640910	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641114_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.42	chr7	+	5377	18	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-102	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	49.0100618156063	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGACTTGTTTTCTGTG	NA	False	NA	17	True	AATGAA	-18	NA	140640914	140652306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644370_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.43	chr7	+	3727	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-95	-3	intron_retention	FALSE	canonical	3	132	junction_13	21.888606879176	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640921	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.44	chr7	+	2559	14	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-95	-1939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	52.2487224157954	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTGACTTCATCTCT	NA	False	NA	NA	False	NA	NA	NA	140640921	140648826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647487_140647612_140647714_140647785
ES.32236.46	chr7	+	3417	16	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-95	-803	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	74.9732989507302	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGCCTGCTCCGGGTA	NA	False	NA	NA	False	AATAAA	-23	NA	140640921	140649962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647509_140647612_140647714_140647785_140648938_140649003_140649137_140649370
ES.32236.48	chr7	+	5290	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-85	0	intron_retention	FALSE	canonical	3	174	junction_7	16.4414411671946	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640931	140652313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.49	chr7	+	3718	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-84	-4	intron_retention	FALSE	canonical	3	132	junction_13	21.4801085129567	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTTGTTTTCTGTGAGT	NA	False	NA	20	True	AATGAA	-21	NA	140640932	140652309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.5	chr7	+	5156	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-159	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	62.0295702873049	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640857	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.50	chr7	+	2593	14	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-83	-1934	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	51.950591000733	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTTCATCTCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	140640933	140648831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645313_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.51	chr7	+	5145	19	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-73	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	63.6356575638238	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640943	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.52	chr7	+	2651	13	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	-70	3489	-70	-1941	intron_retention	FALSE	canonical	3	174	junction_7	13.1708854000869	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAGACTGACTTCATCT	NA	False	NA	NA	False	NA	NA	NA	140640946	140648824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612
ES.32236.53	chr7	+	3470	21	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-66	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	46.6814738413431	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTCTGACTTGTTTTC	NA	False	NA	13	True	AATGAA	-14	NA	140640950	140652302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908_140652017_140652157
ES.32236.55	chr7	+	3548	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-62	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	48.875376920652	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140640954	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.56	chr7	+	5281	18	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	1	junction_13	48.8394020974032	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140641013	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647714_140647785_140650608_140650705_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.57	chr7	+	6274	19	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	115	-7	intron_retention	FALSE	canonical	0	0	junction_1	47.6375202265329	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGACTTGTTTTCTGTG	NA	False	NA	17	True	AATGAA	-18	NA	140641131	140652306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140642529_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.58	chr7	+	3079	17	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	3311	1	-79	-1	3prime_fragment	FALSE	canonical	3	132	junction_11	22.4428962870214	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140644327	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.59	chr7	+	4540	16	NNC	ENSMUSG00000055629.6	novel	3076	16	NA	NA	-36	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	69.7527697578303	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTTTCTGTGAGTG	NA	False	NA	21	True	AATGAA	-22	NA	140644370	140652310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785_140648938_140649003_140649137_140649370_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.6	chr7	+	2744	13	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-149	-1937	intron_retention	FALSE	canonical	3	174	junction_7	12.2573673990607	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGACTTCATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	140640867	140648828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.60	chr7	+	2154	10	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	50	-1776	intron_retention	FALSE	canonical	3	174	junction_3	12.952906151817	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGAGCACTGCAGGG	NA	False	NA	NA	False	ACTAAA	-15	NA	140644456	140648989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785
ES.32236.61	chr7	+	2910	16	ISM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	3503	63	113	29	3prime_fragment	FALSE	canonical	3	132	junction_10	23.0789947788026	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGAGTTCTGTCTGTTCT	NA	False	NA	-39	True	NA	NA	NA	140644519	140652250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.63	chr7	+	1859	13	NIC	ENSMUSG00000055629.6	novel	3076	16	NA	NA	558	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.6548036930913	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140644964	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.64	chr7	+	1352	6	NNC	ENSMUSG00000055629.6	novel	476	3	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	8	junction_1	83.2384526526052	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140650161	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140650225_140650323_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.65	chr7	+	872	5	NNC	ENSMUSG00000055629.6	novel	3076	16	NA	NA	212	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.8568859694253	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140650726	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651922
ES.32236.7	chr7	+	3796	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-149	-2	intron_retention	FALSE	canonical	3	132	junction_14	21.8629287681451	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTCTGTGAGTGT	NA	False	NA	22	True	AATGAA	-23	NA	140640867	140652311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32236.8	chr7	+	3889	18	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-148	-1	intron_retention	FALSE	canonical	3	132	junction_14	22.4967510149438	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTTCTGTGAGTGTT	NA	False	NA	23	True	AATGAA	-24	NA	140640868	140652312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650855_140650954_140651275_140651549_140651677_140651908
ES.32236.9	chr7	+	3768	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-145	-8	intron_retention	FALSE	canonical	3	132	junction_13	21.8974179660582	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGACTTGTTTTCTGT	NA	False	NA	16	True	AATGAA	-17	NA	140640871	140652305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ES.32237.1	chr7	+	2937	14	FSM	ENSMUSG00000054065.13	ENSMUST00000106039.9	2919	14	-19	1	-19	-1	multi-exon	TRUE	canonical	0	0	junction_4	30.8055554814503	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	NA	False	NA	18	True	ATTAAA	-16	NA	140658111	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140658348_140659818_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ES.32237.10	chr7	+	1776	5	NIC	ENSMUSG00000054065.13	novel	1425	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	51	junction_3	8.20060973342836	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCCAGCTCCGTGTGT	620	False	NA	16	True	ATTAAA	-14	NA	140668064	140670420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669675_140669768
ES.32237.2	chr7	+	3510	11	NIC	ENSMUSG00000054065.13	novel	2919	14	NA	NA	147	-1	intron_retention	FALSE	canonical	0	0	junction_4	29.4625185617252	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	NA	False	NA	18	True	ATTAAA	-16	NA	140658277	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140658348_140659818_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768
ES.32237.3	chr7	+	2853	13	FSM	ENSMUSG00000054065.13	ENSMUST00000066873.5	2848	13	-6	1	-6	-1	multi-exon	FALSE	canonical	0	0	junction_3	30.7431112428279	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	NA	False	NA	18	True	ATTAAA	-16	NA	140659666	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ES.32237.4	chr7	+	173	1	Intergenic	novelGene_26353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	140665267	140665440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140665300_140665400
ES.32237.5	chr7	+	1455	7	NNC	ENSMUSG00000054065.13	novel	1425	7	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.8171087939125	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	575	False	NA	18	True	ATTAAA	-16	NA	140668019	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140668304_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ES.32237.6	chr7	+	1431	7	NIC	ENSMUSG00000054065.13	novel	1425	7	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.5255862921022	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	593	False	NA	18	True	ATTAAA	-16	NA	140668037	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140668298_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ES.32237.7	chr7	+	1447	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-17	-5	-17	2	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCCGTGTGTTTCCG	597	False	NA	21	True	ATTAAA	-19	NA	140668041	140670425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ES.32237.8	chr7	+	1613	6	NIC	ENSMUSG00000054065.13	novel	1425	7	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	51	junction_3	8.45221864364618	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	598	False	NA	18	True	ATTAAA	-16	NA	140668042	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669675_140669768_140669857_140670043
ES.32237.9	chr7	+	1894	4	ISM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	-16	-2	-16	-1	intron_retention	FALSE	canonical	3	51	junction_3	6.37704215656966	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCAGCTCCGTGTGTTT	598	False	NA	18	True	ATTAAA	-16	NA	140668042	140670422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157
ES.32238.1	chr7	+	2136	4	Antisense	novelGene_ENSMUSG00002076275.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	140679779	140689647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_140679904_140685968_140686115_140687537_140688263_140688506
ES.32239.1	chr7	+	1583	2	Intergenic	novelGene_26354	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAATTCATTGATTCTTC	NA	False	NA	NA	False	NA	NA	NA	140697774	140700817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140697855_140699314
ES.32239.2	chr7	+	3003	1	Intergenic	novelGene_26355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140697781	140700784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140697800_140700800
ES.3224.1	chr10	-	337	1	Intergenic	novelGene_2526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	78201379	78201042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78201000_78201400
ES.3224.2	chr10	-	161	1	Intergenic	novelGene_2527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	78201377	78201216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78201200_78201400
ES.32240.1	chr7	-	2112	9	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-111	30	intron_retention	TRUE	canonical	3	90	junction_8	21.1527185014125	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTAGGCCTCTTATTG	NA	False	NA	0	True	NA	NA	NA	140676763	140671057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ES.32240.10	chr7	-	4324	5	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-100	0	intron_retention	FALSE	canonical	3	135	junction_1	8.97217922246318	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676752	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672643_140672890_140673839_140674694
ES.32240.11	chr7	-	2090	9	NNC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-100	0	intron_retention	FALSE	canonical	1	3	junction_5	48.8102192168812	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676752	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673051_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ES.32240.12	chr7	-	1795	10	NNC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	46.3395945676196	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676765	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674871_140676532
ES.32240.13	chr7	-	2196	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	46.3395945676196	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676746	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140675231_140676472
ES.32240.14	chr7	-	1974	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	-77	0	-29	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680514	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ES.32240.15	chr7	-	2621	8	NNC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-97	0	intron_retention	FALSE	canonical	1	3	junction_4	65.108386870021	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676749	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140672219_140672293_140672397_140672498_140672643_140672890_140673051_140673112_140673244_140673639_140673839_140674694_140675231_140676532
ES.32240.16	chr7	-	2683	7	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-710	0	intron_retention	FALSE	canonical	3	121	junction_4	12.9614813968157	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140675514	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673839_140674694
ES.32240.17	chr7	-	2163	8	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-90	0	intron_retention	FALSE	canonical	3	90	junction_7	21.5766313498693	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676742	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ES.32240.18	chr7	-	1615	9	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	47.1566538253087	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676728	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673639_140673839_140674694_140674859_140676532
ES.32240.19	chr7	-	1937	8	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-97	0	intron_retention	FALSE	canonical	2	6	junction_5	49.9697867899868	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676749	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673639_140673839_140674694_140674859_140676532
ES.32240.2	chr7	-	1883	10	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-123	30	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	41.7703894176098	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTAGGCCTCTTATTG	NA	False	NA	0	True	NA	NA	NA	140676775	140671057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
ES.32240.20	chr7	-	1729	10	NNC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.3273062741222	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680512	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671473_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ES.32240.21	chr7	-	1948	9	NNC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	49.0688292095909	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGGCTTATTTCTGTCT	NA	False	NA	-31	True	AATAAA	-16	NA	140680476	140671088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674872_140680391
ES.32240.22	chr7	-	2121	8	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	90	junction_7	22.5858904845391	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676642	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ES.32240.23	chr7	-	1831	11	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	57.0807323008386	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676746	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140675967_140676037_140676532
ES.32240.24	chr7	-	1778	10	NNC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.4345230904496	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676779	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671415_140671715_140671906_140672067_140672233_140672495_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140675967_140676037_140676532
ES.32240.25	chr7	-	3059	4	NIC	ENSMUSG00000025494.9	novel	1723	9	NA	NA	-101	0	intron_retention	FALSE	canonical	3	90	junction_3	28.8598144292178	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676753	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140672219_140672293_140673839_140674694_140674859_140676532
ES.32240.26	chr7	-	2021	9	NIC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_8	44.2491172228328	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676644	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676472
ES.32240.27	chr7	-	1871	11	NNC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.67495123535	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676765	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140675967_140676058_140676532
ES.32240.28	chr7	-	4220	6	NIC	ENSMUSG00000025494.9	novel	1723	9	NA	NA	-100	0	intron_retention	FALSE	canonical	3	121	junction_3	13.7782437197199	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140676752	140671089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673839_140674694
ES.32240.29	chr7	-	2710	5	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	90	junction_4	27.8421892099023	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCCTGCCCGGGCTTAT	NA	False	NA	-39	True	AATAAA	-8	NA	140676659	140671096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140672219_140672293_140672643_140672890_140673839_140674694_140674859_140676532
ES.32240.3	chr7	-	5568	2	NIC	ENSMUSG00000025494.9	novel	850	7	NA	NA	-76	2	intron_retention	FALSE	canonical	3	148	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCTTATTTCTGTCTGGG	NA	False	NA	-28	True	AATAAA	-19	NA	140676728	140671085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140672219_140672293
ES.32240.4	chr7	-	1753	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	-137	-4	-107	2	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCTTATTTCTGTCTGGG	NA	False	NA	-28	True	AATAAA	-19	NA	140680592	140671085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ES.32240.5	chr7	-	4350	4	NIC	ENSMUSG00000025494.9	novel	1723	9	NA	NA	-111	1	intron_retention	FALSE	canonical	3	148	junction_1	2.82842712474619	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	-29	True	AATAAA	-18	NA	140676763	140671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140672219_140672293_140673244_140673639_140673839_140674694
ES.32240.6	chr7	-	1961	10	NNC	ENSMUSG00000025494.9	novel	1612	10	NA	NA	565	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.3395945676196	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	-29	True	AATAAA	-18	NA	140679872	140671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140679462
ES.32240.7	chr7	-	2134	7	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	21	1	intron_retention	FALSE	canonical	3	90	junction_6	23.1084400165827	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCTTATTTCTGTCTGG	NA	False	NA	-29	True	AATAAA	-18	NA	140676631	140671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671906_140672067_140672219_140672293_140672643_140672890_140673244_140673639_140673839_140674694_140674859_140676532
ES.32240.8	chr7	-	1797	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-127	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	19.9616917069288	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676779	140671087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
ES.32241.1	chr7	-	3344	22	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	16	272	intron_retention	FALSE	canonical	0	0	junction_3	57.6994716175401	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGCTTTGCCTCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	140697703	140680852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682343_140682440_140682974_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.10	chr7	-	5210	16	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	21	5	intron_retention	FALSE	canonical	3	132	junction_7	19.3879687779131	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCCAGTTTCTAGAGAT	NA	False	NA	-3	True	AATAAA	-33	NA	140697665	140681119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.100	chr7	-	4141	19	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	6	-3	intron_retention	FALSE	canonical	3	117	junction_14	21.2864067214528	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697713	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.101	chr7	-	3266	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	14	junction_10	38.8862251209233	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697735	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.102	chr7	-	3900	17	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-39	-3	intron_retention	FALSE	canonical	3	117	junction_12	20.7481173844761	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697758	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.103	chr7	-	3488	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	83	junction_9	25.7454364888226	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697699	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.105	chr7	-	4406	15	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-1003	-3	intron_retention	FALSE	canonical	3	95	junction_5	19.3813765017359	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140689590	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697
ES.32241.106	chr7	-	3233	19	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-127	intron_retention	FALSE	canonical	3	3	junction_12	41.0866293471625	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCTAGACTATATGTAG	NA	False	NA	NA	False	AATACA	-14	NA	140697733	140681626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688076_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.107	chr7	-	2605	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-3	-132	intron_retention	FALSE	canonical	3	14	junction_10	41.9517282123156	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGGGCCTAGACTATA	NA	False	NA	NA	False	AATACA	-9	NA	140697722	140681631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.11	chr7	-	3393	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-10	3	intron_retention	FALSE	canonical	3	15	junction_16	39.8714693988341	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGATCCAGTTTCTAGAG	NA	False	NA	-5	True	AATAAA	-31	NA	140697729	140681121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.12	chr7	-	3389	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-18	0	intron_retention	FALSE	canonical	3	117	junction_16	20.2598124374339	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGATCCAGTTTCTA	NA	False	NA	-8	True	AATAAA	-28	NA	140697737	140681124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.13	chr7	-	3445	20	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-13	-1	intron_retention	FALSE	canonical	0	0	junction_15	39.926872212255	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTAGATCCAGTTTCT	NA	False	NA	-9	True	AATAAA	-27	NA	140697699	140681125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688856_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.14	chr7	-	3975	19	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	117	junction_14	21.3026399569584	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTAGATCCAGTTTCT	NA	False	NA	-9	True	AATAAA	-27	NA	140697691	140681125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.15	chr7	-	3122	25	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_21	47.4229638466429	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTAGATCCAGTTTCT	NA	False	NA	-9	True	AATAAA	-27	NA	140697722	140681125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.16	chr7	-	3352	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	5	junction_4	42.1805857481728	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTAGATCCAGTTT	NA	False	NA	-11	True	AATAAA	-25	NA	140697701	140681127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.17	chr7	-	3646	18	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	131	junction_14	17.5617546080537	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATGTAGATCCAGTTT	NA	False	NA	-11	True	AATAAA	-25	NA	140697724	140681127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.18	chr7	-	3941	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	2	intron_retention	FALSE	canonical	3	95	junction_5	23.3058669631286	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGATGTAGATCCAGTT	NA	False	NA	-12	True	AATAAA	-24	NA	140697733	140681128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.19	chr7	-	4800	19	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	1	intron_retention	FALSE	canonical	3	8	junction_15	40.9088492947099	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGATGTAGATCCAGT	NA	False	NA	-13	True	AATAAA	-23	NA	140697733	140681129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.2	chr7	-	5495	11	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-8	271	intron_retention	FALSE	canonical	3	8	junction_7	65.3146231712317	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTTTGCCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	140697694	140680853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140682265_140682337_140683148_140683904_140684640_140686675_140687414_140687513_140688605_140688697_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.20	chr7	-	3127	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-8	1	intron_retention	FALSE	canonical	2	3	junction_6	41.4469939294169	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGATGTAGATCCAGT	NA	False	NA	-13	True	AATAAA	-23	NA	140697694	140681129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684078_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690670_140691067_140691143_140697626
ES.32241.21	chr7	-	3604	20	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_19	39.1388606823508	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697722	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691147_140697626
ES.32241.22	chr7	-	5126	16	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-510	0	intron_retention	FALSE	canonical	3	117	junction_11	22.0329046856943	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140698229	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.23	chr7	-	3521	19	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	117	junction_14	20.4483691884985	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697701	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.24	chr7	-	3203	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	0	intron_retention	FALSE	canonical	3	15	junction_17	37.8535335206636	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697701	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.25	chr7	-	5238	16	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	134	junction_8	17.876614146234	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697701	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.26	chr7	-	6758	12	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-3	0	intron_retention	TRUE	canonical	0	0	junction_5	51.0115851369257	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGATGTAGATCCAG	NA	False	NA	-14	True	AATAAA	-22	NA	140697722	140681130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140684494_140684581_140684640_140686675_140687410_140687513_140687771_140687958_140688056_140688163_140688605_140688697_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.27	chr7	-	3676	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	82	junction_8	29.1181812743451	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697726	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.28	chr7	-	3227	24	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	8	junction_20	47.6394778389863	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697736	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.29	chr7	-	3223	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	82	junction_8	29.2584852122611	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697735	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.30	chr7	-	7392	12	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	117	junction_7	25.1698363355232	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697736	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140682045_140682170_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.31	chr7	-	4029	19	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	12	-1	intron_retention	FALSE	canonical	3	3	junction_12	40.2909556986566	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697707	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688076_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.32	chr7	-	3395	19	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	15	junction_15	37.7012705683659	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697699	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.33	chr7	-	3382	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	8	junction_19	46.5493828242901	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697733	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.34	chr7	-	3135	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	82	junction_9	28.5868619768933	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697745	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.35	chr7	-	2881	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	41.3015518088386	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697693	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.36	chr7	-	3306	8	NIC	ENSMUSG00000054662.9	novel	3112	13	NA	NA	839	-1	intron_retention	FALSE	canonical	3	134	junction_6	12.437599348388	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140687748	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709
ES.32241.37	chr7	-	3188	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	5	junction_4	51.158845764931	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCATGATGTAGATCCA	NA	False	NA	-15	True	AATAAA	-21	NA	140697722	140681131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.38	chr7	-	3748	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	82	junction_7	29.8370156014304	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGATGTAGATCC	NA	False	NA	-16	True	AATAAA	-20	NA	140697701	140681132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.39	chr7	-	3271	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	14	junction_9	37.5483437230391	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697733	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.4	chr7	-	3579	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	16	271	intron_retention	FALSE	canonical	3	15	junction_16	36.7062910214859	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTTTGCCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	140697703	140680853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.40	chr7	-	3834	20	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-3	intron_retention	FALSE	canonical	2	3	junction_4	42.3613266371561	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697735	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684078_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.41	chr7	-	5914	14	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	134	junction_6	19.2015162123222	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697729	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140682045_140682170_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.42	chr7	-	2893	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	38.6679282828283	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697701	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686726_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.43	chr7	-	4660	1	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	1065	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140685793	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681100_140685800
ES.32241.44	chr7	-	3588	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-22	-3	intron_retention	FALSE	canonical	0	0	junction_12	43.1277173056956	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697741	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687410_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.45	chr7	-	3122	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	82	junction_9	30.733727132762	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697733	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.46	chr7	-	3254	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_21	56.1469625621785	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697730	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140693882_140693931_140697626
ES.32241.47	chr7	-	3218	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	82	junction_9	28.365527927454	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCTCATGATGTAGATC	NA	False	NA	-17	True	AATAAA	-19	NA	140697733	140681133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.48	chr7	-	3865	19	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-174	3	intron_retention	FALSE	canonical	3	117	junction_14	21.2478030817887	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCTCATGATGTAGAT	NA	False	NA	-18	True	AATAAA	-18	NA	140697893	140681134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.5	chr7	-	3305	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-16	-270	-16	270	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCGGCTTTGCCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140697735	140680854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.50	chr7	-	3402	19	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	1	intron_retention	FALSE	canonical	3	15	junction_15	37.408035381601	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697733	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.51	chr7	-	3741	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-4	1	intron_retention	FALSE	canonical	3	82	junction_7	29.7880429031516	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697723	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.52	chr7	-	3544	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-10	1	intron_retention	FALSE	canonical	3	95	junction_5	24.8354139070304	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697696	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.53	chr7	-	3140	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	1	intron_retention	FALSE	canonical	0	0	junction_13	43.0554370684705	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697733	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687436_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.54	chr7	-	4525	15	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-16	1	intron_retention	FALSE	canonical	3	117	junction_10	22.9466995537084	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697702	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.55	chr7	-	4008	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	1	intron_retention	FALSE	canonical	3	82	junction_7	30.6013596641783	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697733	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.56	chr7	-	5137	15	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-15	1	intron_retention	FALSE	canonical	3	117	junction_10	22.7143980230826	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCTCATGATGTAG	NA	False	NA	-20	True	AATAAA	-16	NA	140697701	140681136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.57	chr7	-	5382	15	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-3	0	intron_retention	FALSE	canonical	3	8	junction_11	55.5433274524474	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697722	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140684494_140684581_140684640_140686675_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.58	chr7	-	3230	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	42.663782616025	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697909	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688698_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.59	chr7	-	3294	22	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-37	0	intron_retention	FALSE	canonical	0	0	junction_11	40.1765378674089	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697756	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687410_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.6	chr7	-	3555	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-11	270	intron_retention	FALSE	canonical	3	95	junction_6	23.6339238865797	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCGGCTTTGCCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	140697730	140680854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.60	chr7	-	3195	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-39	0	intron_retention	FALSE	canonical	3	14	junction_10	38.5609582349817	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697758	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.61	chr7	-	3337	21	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_3	41.1913522477716	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697701	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682341_140682440_140682999_140683148_140683904_140684058_140684154_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.63	chr7	-	3518	21	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-26	0	intron_retention	FALSE	non_canonical	0	0	junction_4	53.5560220703517	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697745	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682973_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687630_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.64	chr7	-	3509	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	0	intron_retention	FALSE	canonical	3	95	junction_6	24.2166781371847	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697735	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.65	chr7	-	8191	10	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	16	0	intron_retention	FALSE	canonical	3	134	junction_4	22.7715438623854	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697703	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140687414_140687513_140687597_140687709_140687771_140687958_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.66	chr7	-	3746	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	0	intron_retention	FALSE	canonical	3	8	junction_19	48.4294024823081	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697701	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.67	chr7	-	3309	21	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	0	intron_retention	FALSE	canonical	1	1	junction_16	40.3639381131227	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697733	140681137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688698_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.68	chr7	-	2047	12	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	839	-1	intron_retention	FALSE	canonical	1	1	junction_8	58.8589854252455	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140687748	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140687145_140687233_140687308_140687414_140687513_140687597_140687709
ES.32241.69	chr7	-	3423	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	82	junction_9	25.8806877806599	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697729	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.7	chr7	-	3894	20	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-13	268	intron_retention	FALSE	canonical	3	8	junction_16	48.8219672640772	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCCGGCTTTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	140697699	140680856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.70	chr7	-	3141	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	5	junction_4	41.2685220124359	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697733	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.71	chr7	-	6767	10	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	16	-1	intron_retention	FALSE	canonical	3	15	junction_6	51.8866285493885	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697703	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140683148_140683904_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.72	chr7	-	3326	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	15	junction_16	36.7062910214859	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697735	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.73	chr7	-	3040	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	29	-1	intron_retention	FALSE	canonical	3	82	junction_10	30.0413282821961	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697657	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.74	chr7	-	3206	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	15	junction_18	41.7402072103048	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697735	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.75	chr7	-	4746	18	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	117	junction_13	21.4198433369928	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697693	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.76	chr7	-	3207	22	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	51.8155196110428	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697701	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687957_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.77	chr7	-	3900	17	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	3	junction_10	43.2129537870301	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697736	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687597_140687709_140687771_140687958_140688076_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.78	chr7	-	3919	18	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	8	junction_14	51.4737141907902	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697701	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.8	chr7	-	3054	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	-27	-8	-27	8	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTTTCTAGAGATTAT	NA	False	NA	0	True	AATAAA	-36	NA	140697746	140681116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.80	chr7	-	3577	19	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_2	41.0201696850178	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697733	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682159_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.82	chr7	-	3462	22	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	8	junction_18	46.5171072815289	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697723	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.83	chr7	-	3184	24	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	3	junction_15	54.4214457894564	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697698	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688076_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.84	chr7	-	5530	13	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	135	junction_8	17.915697648214	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697735	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140687597_140687709_140687771_140687958_140688056_140688163_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.85	chr7	-	3302	22	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	5	junction_4	39.248380529006	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697736	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682974_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.86	chr7	-	3524	20	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	82	junction_8	30.4898148381433	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697735	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.87	chr7	-	3058	22	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	15	junction_18	40.3995352569753	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697722	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.88	chr7	-	4173	20	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	8	junction_16	51.7333349991908	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697702	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688901_140689583_140689685_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.89	chr7	-	3834	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	95	junction_5	24.1277330058172	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697733	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.9	chr7	-	3769	18	NNC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-15	6	intron_retention	FALSE	non_canonical	0	0	junction_6	60.4016544607157	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCAGTTTCTAGAGATT	NA	False	NA	-2	True	AATAAA	-34	NA	140697701	140681118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684496_140684581_140684640_140686675_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.90	chr7	-	2775	22	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	48.5375698980694	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697693	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686726_140687079_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.91	chr7	-	3713	19	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	131	junction_15	19.1318524397868	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697746	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.92	chr7	-	3433	18	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	15	junction_14	38.4844371547017	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGAGCCTCATGATGT	NA	False	NA	-22	True	AATAAA	-14	NA	140697693	140681138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.93	chr7	-	4121	23	NNC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	1181	-2	intron_retention	FALSE	canonical	0	0	junction_21	49.7826889159523	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTGAGCCTCATGATG	NA	False	NA	-23	True	AATAAA	-13	NA	140696505	140681139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140695856_140696307_140696402
ES.32241.94	chr7	-	3496	19	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	14	junction_9	38.5760432277743	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697733	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687233_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.95	chr7	-	4089	18	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	117	junction_13	21.8413594517137	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697722	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.96	chr7	-	4312	17	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	6	-3	intron_retention	FALSE	canonical	3	117	junction_12	22.4913177693082	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697713	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140683148_140683904_140684494_140684581_140684640_140686675_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.97	chr7	-	3793	18	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	95	junction_6	25.2216472080884	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697733	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140687771_140687958_140688056_140688163_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.98	chr7	-	3763	21	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	82	junction_9	31.1462277009592	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697746	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32241.99	chr7	-	4285	16	NIC	ENSMUSG00000054662.9	novel	3088	23	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	15	junction_12	40.7870349770883	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGAGCCTCATGAT	NA	False	NA	-24	True	AATAAA	-12	NA	140697735	140681140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688757_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ES.32242.1	chr7	+	427	1	Intergenic	novelGene_26356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAAGTAGCAGGTGTGC	NA	False	NA	NA	False	AAAACA	-11	NA	140701619	140702046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140701600_140702000
ES.32242.2	chr7	+	175	1	Intergenic	novelGene_26357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAAACAAACAGGG	NA	False	NA	NA	False	NA	NA	NA	140701620	140701795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140701600_140701800
ES.32243.1	chr7	+	160	1	Intergenic	novelGene_26358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	140702633	140702793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140702600_140702800
ES.32244.1	chr7	+	1113	2	Intergenic	novelGene_26359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAATCTGAGTGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	140703328	140706915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140703470_140705943
ES.32245.1	chr7	+	166	1	Intergenic	novelGene_26360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAATAAA	4099	False	NA	NA	False	NA	NA	NA	140708487	140708653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140708500_140708700
ES.32246.1	chr7	+	2213	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	5	1406	5	598	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGAGTGTGTGTGTCTG	6815	False	NA	57	True	NA	NA	NA	140711203	140736113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.10	chr7	+	2145	11	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	16	597	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_5	124.965955363851	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGAGTGTGTGTGTCT	6841	False	NA	56	True	NA	NA	NA	140711229	140736112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140726993_140727062_140731562_140731698_140732104_140732156_140732645_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.11	chr7	+	3593	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	43	-12	-15	12	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTGTTGTAGAAATTC	6853	False	NA	NA	False	AAAACA	-7	NA	140711241	140737531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.12	chr7	+	2004	12	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-14	555	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	88.9139243899021	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGGCTGCCCTTTGC	6854	False	NA	14	True	AATAAA	-19	NA	140711242	140736070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734850_140734910_140735246
ES.32246.13	chr7	+	3473	10	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-11	552	intron_retention	FALSE	canonical	3	293	junction_1	18.9326290948839	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6857	False	NA	11	True	AATAAA	-16	NA	140711245	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140734616_140734723_140734910_140735246
ES.32246.14	chr7	+	1570	6	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-11	567	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	120.450155666151	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCCCCGTGCTCTAT	6857	False	NA	26	True	AATAAA	-31	NA	140711245	140736082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.15	chr7	+	2209	12	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-9	596	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_6	91.8539984148398	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGAGTGTGTGTGTC	6859	False	NA	55	True	NA	NA	NA	140711247	140736111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732645_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.19	chr7	+	3624	12	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	30	404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	120.809733612558	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCCGAGTTATTAATTA	6910	False	NA	NA	False	NA	NA	NA	140711298	140737923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246_140737542_140737762
ES.32246.2	chr7	+	2184	12	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-7	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	92.5933078637815	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGGCTGCCCTTTGC	6818	False	NA	14	True	AATAAA	-19	NA	140711206	140736070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734706_140734910_140735246
ES.32246.20	chr7	+	2082	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	555	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGGCTGCCCTTTGC	NA	False	NA	14	True	AATAAA	-19	NA	140714505	140736070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.21	chr7	+	9380	4	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2050	544	intron_retention	FALSE	canonical	3	29	junction_1	139.68854243956	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGCATAGCCTCTGG	NA	False	NA	3	True	AATAAA	-8	NA	140714515	140736059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993
ES.32246.22	chr7	+	2311	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2295	552	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	92.0409538742545	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	NA	False	NA	11	True	AATAAA	-16	NA	140714760	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140715132_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.23	chr7	+	3229	11	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	2804	12	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	93.250415548672	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTGTTGTAGAAATTC	NA	False	NA	NA	False	AAAACA	-7	NA	140715269	140737531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734850_140734910_140735246
ES.32246.24	chr7	+	3407	2	Genic_Genomic	ENSMUSG00000025495.16	novel	899	10	NA	NA	7478	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGTGTATATTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	140719943	140723583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_140720672_140720904
ES.32246.25	chr7	+	1767	9	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	15783	1452	-7554	552	3prime_fragment	FALSE	canonical	3	296	junction_7	17.3493515728975	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	NA	False	NA	11	True	AATAAA	-16	NA	140726981	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.26	chr7	+	1772	9	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	-5778	555	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	106.400187969759	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGGCTGCCCTTTGC	NA	False	NA	14	True	AATAAA	-19	NA	140728757	140736070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140728840_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.27	chr7	+	1777	9	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	-5665	550	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	136.460101769711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATAGCCTCTGGCTGCCC	NA	False	NA	9	True	AATAAA	-14	NA	140728870	140736065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140728921_140731562_140731698_140732104_140732156_140732645_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.28	chr7	+	1570	7	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	20905	1435	-2432	569	3prime_fragment	FALSE	canonical	3	296	junction_5	15.1373342728794	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCCCGTGCTCTATGC	NA	False	NA	28	True	AATAAA	-33	NA	140732103	140736084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.29	chr7	+	1389	5	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	21685	1454	-1652	550	3prime_fragment	FALSE	canonical	3	296	junction_3	7.62807315119618	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATAGCCTCTGGCTGCCC	NA	False	NA	9	True	AATAAA	-14	NA	140732883	140736065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.3	chr7	+	3794	13	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	-1	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	88.9414211090023	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCCGAGTTATTAATTAC	6824	False	NA	NA	False	NA	NA	NA	140711212	140737924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246_140737542_140737762
ES.32246.30	chr7	+	2588	2	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	22192	1452	-1145	552	intron_retention	FALSE	canonical	3	315	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	NA	False	NA	11	True	AATAAA	-16	NA	140733390	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140734381_140734469
ES.32246.4	chr7	+	2064	12	NNC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	15	552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	92.7581053908632	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6840	False	NA	11	True	AATAAA	-16	NA	140711228	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734875_140735289
ES.32246.5	chr7	+	3399	11	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	15	550	intron_retention	FALSE	canonical	3	293	junction_1	17.968027159374	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATAGCCTCTGGCTGCCC	6840	False	NA	9	True	AATAAA	-14	NA	140711228	140736065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.6	chr7	+	2250	11	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	16	553	intron_retention	FALSE	canonical	3	293	junction_1	16.6796282932204	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	6841	False	NA	12	True	AATAAA	-17	NA	140711229	140736068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734910_140735246
ES.32246.7	chr7	+	2103	8	FSM	ENSMUSG00000025495.16	ENSMUST00000174706.8	2119	8	16	0	16	0	multi-exon	FALSE	canonical	3	293	junction_1	19.06701393528	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGCTGCTGGCTCTCT	6841	False	NA	NA	False	AATAAA	-21	NA	140711229	140734236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887
ES.32246.8	chr7	+	2058	11	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	16	552	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	93.4751838725124	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6841	False	NA	11	True	AATAAA	-16	NA	140711229	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ES.32246.9	chr7	+	3508	10	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	16	552	intron_retention	FALSE	canonical	3	293	junction_1	17.5168349359363	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGGCTGCCCTT	6841	False	NA	11	True	AATAAA	-16	NA	140711229	140736067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140734381_140734469_140734910_140735246
ES.32247.1	chr7	-	205	1	Intergenic	novelGene_26361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	140720847	140720642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140720600_140720800
ES.32248.1	chr7	-	174	1	Intergenic	novelGene_26362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATTTTGGGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	140721033	140720859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140720900_140721000
ES.32249.1	chr7	-	2324	1	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCATGTGACCTGATCT	NA	False	NA	NA	False	NA	NA	NA	140728666	140726342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140726300_140728700
ES.32249.2	chr7	-	4223	5	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCATGTGACCTGATCT	NA	False	NA	NA	False	NA	NA	NA	140736089	140726342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140727059_140731559_140731694_140732098_140732154_140732685_140732798_140732883
ES.32249.3	chr7	-	4112	6	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140736089	140726364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140727059_140731559_140731694_140732098_140732154_140732685_140732798_140732883_140734380_140734468
ES.32249.4	chr7	-	5547	4	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGACCAAACCAACATCCC	NA	False	NA	NA	False	NA	NA	NA	140736089	140729519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140731694_140732098_140732154_140732685_140732798_140732883
ES.32249.5	chr7	-	6550	1	Antisense	novelGene_ENSMUSG00000025495.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140736089	140729539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140729500_140736100
ES.3225.1	chr10	+	490	1	FSM	ENSMUSG00000064317.6	ENSMUST00000072739.6	309	1	-17	-164	-17	164	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTAATTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	78229136	78229626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78229100_78229600
ES.32250.1	chr7	-	205	1	Intergenic	novelGene_26363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATTTCTACAACAA	NA	False	NA	NA	False	NA	NA	NA	140737761	140737556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140737600_140737800
ES.32251.1	chr7	+	686	1	Antisense	novelGene_ENSMUSG00000038650.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCTCTGGATTATTT	NA	False	NA	NA	False	NA	NA	NA	140752520	140753206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_140752500_140753200
ES.32252.1	chr7	-	1660	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	3	-7	3	5	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGTCGTTCTTTGTGG	7995	False	NA	NA	False	ATTAAA	-21	NA	140752767	140740233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ES.32252.10	chr7	-	1581	10	NNC	ENSMUSG00000038650.16	novel	1656	10	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	271.253787593741	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAAAGGTCCTTGTCGT	8058	False	NA	NA	False	ATTAAA	-12	NA	140752704	140740242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744085_140744416_140744588_140746595_140746701_140752654
ES.32252.11	chr7	-	1344	9	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	252.688512550531	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAAAGGTCCTTGTCGT	NA	False	NA	NA	False	ATTAAA	-12	NA	140748638	140740242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744460_140748599
ES.32252.2	chr7	-	3986	5	NIC	ENSMUSG00000038650.16	novel	1656	10	NA	NA	30	4	intron_retention	FALSE	canonical	3	317	junction_4	209.091487153351	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	8022	False	NA	NA	False	ATTAAA	-20	NA	140752740	140740234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140743192_140743266_140743438_140743920_140744588_140746595_140746701_140752654
ES.32252.3	chr7	-	4623	11	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	66	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	244.583727995139	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	8058	False	NA	NA	False	ATTAAA	-20	NA	140752704	140740234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588_140751605_140752643
ES.32252.5	chr7	-	3432	8	NIC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	441	junction_7	122.626860592513	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	140748620	140740240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140740479_140740562_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ES.32252.6	chr7	-	1664	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	-8	2	-8	0	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	140748610	140740240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
ES.32252.8	chr7	-	2336	11	NNC	ENSMUSG00000038650.16	novel	2091	10	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	244.583727995139	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	8050	False	NA	NA	False	ATTAAA	-14	NA	140752712	140740240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588_140749327_140752654
ES.32253.1	chr7	+	154	1	Intergenic	novelGene_26364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140760508	140760662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140760500_140760700
ES.32254.1	chr7	-	3364	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	88	-2253	-35	432	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTGGCTGGAACTGCAC	NA	False	NA	NA	False	AATAAA	-14	NA	140773830	140768585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.10	chr7	-	1076	6	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	225.486496269732	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773910	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771141_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.11	chr7	-	1174	5	NNC	ENSMUSG00000025499.19	novel	1122	5	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_1	295.863989021983	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773853	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140771372_140772043_140772254_140772354_140772534_140772742_140772895_140773752
ES.32254.12	chr7	-	1192	6	NNC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	275.68489258572	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773689	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140771141_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773415
ES.32254.13	chr7	-	1093	6	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	226.85290388267	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773910	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771108_140771254_140771381_140772043_140772254_140772354_140772534_140772742_140772895_140773752
ES.32254.14	chr7	-	1150	7	NIC	ENSMUSG00000025499.19	novel	2272	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773935	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.16	chr7	-	928	6	NNC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	-346	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	236.046944483507	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCTGGCTGGAAG	-18	True	NA	-4	True	AGTAAA	-16	NA	140773199	140770840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773155
ES.32254.17	chr7	-	1485	5	NNC	ENSMUSG00000025499.19	novel	1199	5	NA	NA	3	1	intron_retention	FALSE	canonical	3	6	junction_4	249.06926747393	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTCTCTGGCTGGAA	NA	False	NA	-5	True	AGTAAA	-15	NA	140773870	140770841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773415
ES.32254.18	chr7	-	2254	3	ISM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	9	3	-2	1	intron_retention	FALSE	canonical	3	437	junction_1	70.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTCTCTGGCTGGAA	NA	False	NA	-5	True	AGTAAA	-15	NA	140773909	140770841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140771381_140772043_140772204_140772354
ES.32254.19	chr7	-	1370	4	NIC	ENSMUSG00000025499.19	novel	1199	5	NA	NA	-23	1	intron_retention	FALSE	canonical	3	437	junction_1	85.8888170187999	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTCTCTGGCTGGAA	NA	False	NA	-5	True	AGTAAA	-15	NA	140773941	140770841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771381_140772043_140772534_140772742_140772895_140773752
ES.32254.2	chr7	-	3175	4	NIC	ENSMUSG00000025499.19	novel	1199	5	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	437	junction_1	85.8888170187999	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTCTGGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	140773926	140769021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771381_140772043_140772534_140772742_140772895_140773752
ES.32254.20	chr7	-	1270	5	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	-13	0	intron_retention	FALSE	canonical	3	237	junction_1	130.777243815581	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	-6	True	AGTAAA	-14	NA	140773931	140770842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772895_140773752
ES.32254.3	chr7	-	1434	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	108	-343	-15	343	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTTGCCCTGACCCA	NA	False	NA	NA	False	AATACA	-20	NA	140773810	140770495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.4	chr7	-	1618	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	2	652	2	340	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAAGATTTGCCCTGAC	NA	False	NA	NA	False	AATACA	-17	NA	140773915	140770498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.5	chr7	-	1475	7	NIC	ENSMUSG00000025499.19	novel	2272	6	NA	NA	-8	333	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACAGAGTGTAAGATTTG	NA	False	NA	NA	False	AATACA	-10	NA	140773926	140770505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.6	chr7	-	1075	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	-69	1822	-24	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773942	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.7	chr7	-	1303	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	-24	993	-23	0	multi-exon	FALSE	canonical	3	72	junction_2	252.24797323269	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773941	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32254.8	chr7	-	2440	2	ISM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	-24	1	-24	0	intron_retention	FALSE	canonical	3	437	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773942	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140771381_140772043
ES.32254.9	chr7	-	1234	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	-36	1	-36	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	False	NA	-3	True	AGTAAA	-17	NA	140773954	140770839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ES.32255.1	chr7	+	2844	13	NNC	ENSMUSG00000038637.16	novel	2502	13	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.56955531301684	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCACTGCCTGCCTGGCC	370	False	NA	5	True	AATAAA	-9	NA	140774042	140789957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140774812_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785752_140786247_140786432_140786860_140787023_140787080_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.2	chr7	+	3186	13	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.90920701180312	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	371	False	NA	16	True	AATAAA	-20	NA	140774043	140789968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140775130_140775820_140775926_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.3	chr7	+	5045	11	NIC	ENSMUSG00000038637.16	novel	2502	13	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	14	junction_2	5.60446250768082	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCACTGCCTGCCTGGCC	389	False	NA	5	True	AATAAA	-9	NA	140774061	140789957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140774531_140775820_140775892_140776894_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.4	chr7	+	2584	13	NNC	ENSMUSG00000038637.16	novel	2502	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCCTGGCTGACCTA	404	False	NA	16	True	AATAAA	-20	NA	140774076	140789968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785608_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787661_140787743_140787884_140789296
ES.32255.5	chr7	+	2583	5	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8.68907359849138	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGATGAAGATGTGTAA	418	False	NA	NA	False	ATTAAA	-12	NA	140774090	140780854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140775130_140775820_140775926_140776894_140777083_140778186_140778275_140779691
ES.32255.6	chr7	+	3015	12	NIC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.59559756623477	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCCTGGCTGACCT	419	False	NA	15	True	AATAAA	-19	NA	140774091	140789967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140775130_140775820_140775892_140776894_140777083_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.7	chr7	+	2244	13	FSM	ENSMUSG00000038637.16	ENSMUST00000047093.11	2197	13	-45	-2	-45	0	multi-exon	FALSE	canonical	1	3	junction_1	6.88597608670453	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGCCTGGCCTGGCT	1273	False	NA	10	True	AATAAA	-14	NA	140774945	140789962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140775130_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.8	chr7	+	3313	12	NNC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	31	1	intron_retention	FALSE	canonical	1	3	junction_1	8.26023032116403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCTGGCTGACCTAC	1349	False	NA	17	True	AATAAA	-21	NA	140775021	140789969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140775130_140775820_140775926_140776894_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32255.9	chr7	+	2192	13	NIC	ENSMUSG00000038637.16	novel	2197	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	8.26471751214496	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGCCTGGCCTGGCT	1381	False	NA	10	True	AATAAA	-14	NA	140775053	140789962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140775130_140775820_140775892_140776894_140777083_140778130_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ES.32256.1	chr7	-	179	1	Intergenic	novelGene_26365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCTTATTTATTTAT	5138	False	NA	NA	False	NA	NA	NA	140782711	140782532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140782500_140782700
ES.32257.1	chr7	-	2574	1	Antisense	novelGene_ENSMUSG00000038637.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATACCATTTGTAGAG	1698	False	NA	NA	False	NA	NA	NA	140786151	140783577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140783600_140786200
ES.32257.10	chr7	-	3676	13	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1595	0	intron_retention	FALSE	canonical	2	7	junction_7	3.17433282579015	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAGAGTTGAAAATGA	NA	False	NA	-1	True	AGTAAA	-14	NA	140795588	140789904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140793991_140794347
ES.32257.11	chr7	-	3362	14	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1622	0	intron_retention	FALSE	canonical	0	0	junction_10	4.81245917526679	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAGAGTTGAAAATGA	NA	False	NA	-1	True	AGTAAA	-14	NA	140795615	140789904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791482_140791696_140791969_140792308_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793542_140793700_140793786_140793991_140794347_140795372_140795492
ES.32257.12	chr7	-	2947	14	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1211	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4.21465462517007	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCTGAGAGTTGAAAATG	NA	False	NA	-2	True	AGTAAA	-13	NA	140795204	140789905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140791965_140792308_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140793991_140794347
ES.32257.13	chr7	-	4301	10	NIC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1434	-2	intron_retention	FALSE	canonical	2	7	junction_7	3.02254900194121	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCTGAGAGTTGAAAAT	NA	False	NA	-3	True	AGTAAA	-12	NA	140795427	140789906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114
ES.32257.14	chr7	-	4244	9	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1501	-3	intron_retention	FALSE	canonical	2	7	junction_4	3.29535658161602	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACCTGAGAGTTGAAAA	NA	False	NA	-4	True	AGTAAA	-11	NA	140795494	140789907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793700_140793786_140793991_140794347
ES.32257.2	chr7	-	8969	10	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1458	4947	intron_retention	TRUE	canonical	0	0	junction_1	4.67723670663315	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGCTGTCATGGGGT	NA	False	NA	NA	False	NA	NA	NA	140795451	140784957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790704_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793700_140793786_140793991_140794347
ES.32257.3	chr7	-	3048	13	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1458	13	intron_retention	FALSE	canonical	1	1	junction_12	4.09182789906364	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGATTCGCTTGGCTTT	NA	False	NA	12	True	AGTAAA	-27	NA	140795451	140789891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793700_140793786_140793991_140794347_140794416_140795263
ES.32257.4	chr7	-	3213	14	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1451	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4.86017507659425	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTGAAAATGATTCGCT	NA	False	NA	5	True	AGTAAA	-20	NA	140795444	140789898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790463_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140791965_140792308_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140793991_140794347
ES.32257.5	chr7	-	5008	6	NIC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1570	2	intron_retention	FALSE	canonical	2	7	junction_3	2.92574776766556	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGAGTTGAAAATGATT	NA	False	NA	1	True	AGTAAA	-16	NA	140795563	140789902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140790801_140790885_140791006_140791084_140792398_140792498_140792571_140792838_140792995_140793114
ES.32257.6	chr7	-	2636	9	NIC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	121	1	intron_retention	FALSE	canonical	2	7	junction_4	3.29535658161602	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAGTTGAAAATGAT	NA	False	NA	0	True	AGTAAA	-15	NA	140793869	140789903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786
ES.32257.7	chr7	-	3200	13	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1613	1	intron_retention	FALSE	non_canonical	0	0	junction_12	4.2882267767562	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAGAGTTGAAAATGAT	NA	False	NA	0	True	AGTAAA	-15	NA	140795606	140789903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140794416_140795267
ES.32257.8	chr7	-	3445	13	NNC	ENSMUSG00000025500.13	novel	2095	13	NA	NA	-1435	0	intron_retention	FALSE	canonical	2	2	junction_2	4.02336923485777	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAGAGTTGAAAATGA	NA	False	NA	-1	True	AGTAAA	-14	NA	140795428	140789904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140790118_140790193_140790373_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786_140793991_140794347
ES.32258.1	chr7	+	1888	3	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	-17	0	-17	0	intron_retention	FALSE	canonical	3	288	junction_1	28.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795755	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140795854_140796633_140796765_140796912
ES.32258.10	chr7	+	6394	22	Fusion	ENSMUSG00000038618.13_ENSMUSG00000038611.18	novel	4864	13	NA	NA	9	13	multi-exon	FALSE	canonical	0	0	junction_5	72.3494292257862	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAGAAGGTGAAGCGGT	NA	False	NA	97	True	NA	NA	NA	140795796	140842676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.11	chr7	+	1815	3	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	288	junction_1	26.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795803	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140797626_140797798
ES.32258.12	chr7	+	1558	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-2	4	-2	-4	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTCAGTGTGTCC	NA	False	NA	13	True	AATAAA	-10	NA	140795804	140798564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ES.32258.13	chr7	+	1458	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	127.53258407168	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795810	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140796765_140796941_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.14	chr7	+	1657	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	136.336935567732	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795811	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140796025_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.15	chr7	+	2745	1	FSM	ENSMUSG00000038618.13	ENSMUST00000209760.2	338	1	-1724	-683	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795826	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140795800_140798600
ES.32258.16	chr7	+	2245	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	22	1	intron_retention	FALSE	canonical	3	329	junction_4	8.98262211161084	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140795833	140798572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.17	chr7	+	2211	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	26	0	intron_retention	FALSE	canonical	3	14	junction_1	142.014964000277	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795837	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140796765_140796941_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.18	chr7	+	1571	6	NIC	ENSMUSG00000038618.13	novel	661	3	NA	NA	-69	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	122.763186664407	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140796046	140798572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140796173_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.19	chr7	+	1598	4	ISM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	743	-1	2	1	3prime_fragment	FALSE	canonical	3	329	junction_3	6.79869268479038	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGTGTGTCCTGAGG	NA	False	NA	18	True	AATAAA	-15	NA	140796549	140798569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140796765_140796912_140797626_140797798_140798082_140798182
ES.32258.2	chr7	+	828	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	-16	0	combination_of_known_splicesites	TRUE	canonical	3	36	junction_2	126.772187407175	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795756	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140796765_140797798_140797931_140798002_140798082_140798182
ES.32258.20	chr7	+	1722	2	NIC	ENSMUSG00000038618.13	novel	1560	5	NA	NA	134	1	intron_retention	FALSE	canonical	3	329	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGTGTGTCCTGAGG	NA	False	NA	18	True	AATAAA	-15	NA	140796746	140798569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140798082_140798182
ES.32258.21	chr7	+	5366	18	NNC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	-2708	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.9266959857255	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTTCTATGGACTG	NA	False	NA	76	True	NA	NA	NA	140805988	140842655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140806094_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.22	chr7	+	5901	16	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-309	2	intron_retention	FALSE	canonical	3	178	junction_2	30.2475710686917	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808387	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836836_140837256_140837412_140837944_140840621_140840872_140841456_140841688_140841818_140842321
ES.32258.23	chr7	+	5783	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-295	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.5525880285477	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808401	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840758_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.24	chr7	+	5570	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-267	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_15	49.6653158513657	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808429	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.25	chr7	+	5275	18	NNC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	-253	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.9712072378967	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTAATTTATCAAA	NA	False	NA	42	True	NA	NA	NA	140808443	140842621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808495_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.26	chr7	+	5687	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-248	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	60.4344707887442	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATCAAAAATGGCTTA	NA	False	NA	51	True	NA	NA	NA	140808448	140842630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837161_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.27	chr7	+	5669	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	-249	-172	-244	48	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACGGCTCAGTGGAAG	NA	False	NA	132	True	NA	NA	NA	140808452	140842711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.29	chr7	+	5836	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-209	1	intron_retention	FALSE	canonical	3	50	junction_2	50.6723543956663	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808487	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.3	chr7	+	1535	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	-9	-1	-9	1	multi-exon	FALSE	canonical	3	288	junction_1	23.1395764870492	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140795763	140798572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.30	chr7	+	5464	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	63.3399134565102	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACTGATGCTTAGAAG	NA	False	NA	87	True	NA	NA	NA	140808654	140842666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.32	chr7	+	5925	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_9	62.3863967544208	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808677	140842663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828419_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.33	chr7	+	5736	16	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-11	48	intron_retention	FALSE	canonical	1	1	junction_13	75.8425269152399	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACGGCTCAGTGGAAG	NA	False	NA	132	True	NA	NA	NA	140808685	140842711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140840621_140841200_140841456_140841688_140841818_140842321
ES.32258.34	chr7	+	5660	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-10	2	intron_retention	FALSE	canonical	1	2	junction_15	61.2152643852005	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808686	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140841028_140841125_140841456_140841661_140841818_140842321
ES.32258.35	chr7	+	5534	19	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.1385838028617	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808686	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823301_140823452_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.37	chr7	+	5816	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	-17	intron_retention	FALSE	canonical	3	50	junction_2	64.6644886607016	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGCTTATGTTTAGA	NA	False	NA	59	True	NA	NA	NA	140808687	140842638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.38	chr7	+	5368	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	69.6766133636458	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAACTTTTCTATGGACT	NA	False	NA	75	True	NA	NA	NA	140808687	140842654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827139_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.4	chr7	+	1627	5	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	-1	0	-1	0	intron_retention	FALSE	canonical	3	288	junction_1	25.8360213655276	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795771	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002
ES.32258.40	chr7	+	5002	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.4108113630964	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCTAATTTATCAAAAAT	NA	False	NA	45	True	NA	NA	NA	140808687	140842624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140841315_140841456_140841688_140841818_140842321
ES.32258.41	chr7	+	5157	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	62.193215817724	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808687	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140841200_140841456_140841688_140841818_140842321
ES.32258.43	chr7	+	5421	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.579752022859	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808687	140842663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837906_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.44	chr7	+	5353	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	62.9845919533453	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808687	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.46	chr7	+	5505	19	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.006413072685	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGGACTGATGCTTA	NA	False	NA	83	True	NA	NA	NA	140808687	140842662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140814039_140814160_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.48	chr7	+	5730	16	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	2	intron_retention	FALSE	canonical	3	178	junction_2	28.1895173582112	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808687	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140841456_140841688_140841818_140842321
ES.32258.49	chr7	+	5231	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_14	61.1079986581135	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808687	140842663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140841125_140841456_140841688_140841818_140842321
ES.32258.5	chr7	+	1559	5	NIC	ENSMUSG00000038618.13	novel	1560	5	NA	NA	-5	1	intron_retention	FALSE	canonical	3	14	junction_2	133.665627593634	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTGTCCTGAGGTTG	NA	False	NA	21	True	AATAAA	-18	NA	140795782	140798572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140796765_140796941_140797626_140797798_140798082_140798182
ES.32258.51	chr7	+	5425	19	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.0608245392717	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808687	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140814039_140814160_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.53	chr7	+	5328	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	78.9721601333316	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808688	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841661_140841818_140842321
ES.32258.57	chr7	+	5421	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.5525880285477	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808699	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840629_140840827_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.58	chr7	+	5357	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	58.954736023953	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808700	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837961_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.59	chr7	+	5151	17	NNC	ENSMUSG00000038611.18	novel	5271	17	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	62.4608627462029	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTTTCCATTGTGTT	NA	False	NA	29	True	NA	NA	NA	140808700	140842608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823753_140827145_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.6	chr7	+	1373	5	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	138.989882725326	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795793	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.60	chr7	+	5628	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	59.0647993227027	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808703	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140809066_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.61	chr7	+	5116	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	72.7463218571908	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACTGTTTCCATTGTGT	NA	False	NA	28	True	NA	NA	NA	140808703	140842607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.63	chr7	+	5288	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	80.4070526611134	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808707	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820888_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.64	chr7	+	5909	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	16	1	intron_retention	FALSE	canonical	0	0	junction_7	62.41043582607	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140808717	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827114_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.65	chr7	+	5447	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	17	2	intron_retention	FALSE	canonical	3	178	junction_2	29.2871025367823	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808718	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841456_140841688_140841818_140842321
ES.32258.66	chr7	+	8158	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	17	0	intron_retention	FALSE	canonical	3	50	junction_2	51.3075515275286	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808718	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.67	chr7	+	5320	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	83.66240448299	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTTCTATGGACTG	NA	False	NA	76	True	NA	NA	NA	140808719	140842655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827139_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837961_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.68	chr7	+	5299	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	18	-69	18	-5	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGTTTCCATTGTGTT	NA	False	NA	29	True	NA	NA	NA	140808719	140842608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.69	chr7	+	5218	17	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	78.7423607405823	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCTATGGACTGAT	NA	False	NA	78	True	NA	NA	NA	140808720	140842657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140808805_140811139_140811256_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827139_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.7	chr7	+	913	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	131.079517850807	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795796	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140796765_140797500_140797626_140797798_140797931_140798002_140798082_140798182
ES.32258.70	chr7	+	5166	17	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	25	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	80.8084154033477	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTGTTCTAATTTAT	NA	False	NA	38	True	NA	NA	NA	140808726	140842617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837161_140837412_140837944_140840621_140841200_140841456_140841688_140841818_140842321
ES.32258.72	chr7	+	5458	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	54	4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	70.025304373456	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTGTTCTAATTTAT	NA	False	NA	38	True	NA	NA	NA	140808755	140842617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140809066_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.73	chr7	+	5405	18	NNC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	353	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.2554747272034	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCCATTGTGTTCT	NA	False	NA	31	True	NA	NA	NA	140809054	140842610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140809243_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827314_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.74	chr7	+	5024	15	ISM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	8707	-117	2073	1	3prime_fragment	FALSE	canonical	3	188	junction_11	27.3466037140607	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTTCTATGGACTGA	NA	False	NA	77	True	NA	NA	NA	140817408	140842656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.75	chr7	+	6982	11	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	-1256	0	intron_retention	FALSE	canonical	3	56	junction_8	61.7248734304089	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140822155	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.76	chr7	+	5814	12	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	187	-1	intron_retention	FALSE	canonical	3	188	junction_8	29.9194510932104	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGGACTGATGCTTA	NA	False	NA	83	True	NA	NA	NA	140823598	140842662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140823810_140826759_140826858_140827133_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.77	chr7	+	157	1	Intergenic	novelGene_26369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140826051	140826208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140826100_140826200
ES.32258.78	chr7	+	5286	8	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	3797	5	intron_retention	FALSE	canonical	3	227	junction_2	26.14480867033	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTGTTCTAATTTATC	NA	False	NA	39	True	NA	NA	NA	140827208	140842618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140841456_140841688_140841818_140842321
ES.32258.79	chr7	+	4396	10	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	4878	1	combination_of_known_junctions	FALSE	canonical	3	53	junction_6	65.3822568146194	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGGACTGATGCTTAGA	NA	False	NA	85	True	NA	NA	NA	140828289	140842664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.8	chr7	+	1750	4	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	288	junction_1	28.5462587546755	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795796	140798571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140795854_140796633_140797626_140797798_140797931_140798002
ES.32258.80	chr7	+	4251	9	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	99.9130090378625	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140834879	140842660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140834905_140836410_140836593_140836715_140836836_140837161_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
ES.32258.81	chr7	+	3834	7	NIC	ENSMUSG00000038611.18	novel	4864	13	NA	NA	798	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	79.7287066662107	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	1133	False	NA	84	True	NA	NA	NA	140836713	140842663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
ES.32258.82	chr7	+	3030	2	FSM	ENSMUSG00000038611.18	ENSMUST00000144250.2	518	2	-2470	-42	19	0	multi-exon	FALSE	canonical	3	309	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTTCTATGGACTG	3541	False	NA	76	True	NA	NA	NA	140839121	140842655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140841818_140842321
ES.32258.9	chr7	+	1436	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	-10	134	9	-134	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGGCCCCAAAGGCATG	NA	False	NA	NA	False	AATAAA	-19	NA	140795796	140798434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ES.32259.1	chr7	+	178	1	Intergenic	novelGene_26370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	2406	False	NA	NA	False	NA	NA	NA	140859828	140860006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140859800_140860000
ES.3226.1	chr10	-	163	1	Intergenic	novelGene_2528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAAAGAAGAAGAA	1682	False	NA	NA	False	NA	NA	NA	78233056	78232893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78232900_78233100
ES.32260.1	chr7	+	174	1	Intergenic	novelGene_26371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGCGAGCAGGGACTG	6708	False	NA	NA	False	NA	NA	NA	140864130	140864304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140864100_140864300
ES.32261.1	chr7	+	204	1	Intergenic	novelGene_26372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTTTCTCTGAGAAG	9112	False	NA	NA	False	NA	NA	NA	140866534	140866738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140866500_140866700
ES.32262.1	chr7	+	1350	4	FSM	ENSMUSG00000025496.6	ENSMUST00000026569.6	2799	4	-54	1503	-54	868	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGCTGGGGGTTGGGA	NA	False	NA	NA	False	ATTAAA	-22	NA	140871864	140874874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140872227_140873625_140873739_140873825_140874398_140874571
ES.32263.1	chr7	+	617	1	Intergenic	novelGene_26373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	229	False	NA	NA	False	GGGGCT	-28	NA	140882664	140883281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140882700_140883300
ES.32264.1	chr7	+	1945	2	FSM	ENSMUSG00000025505.17	ENSMUST00000155657.2	905	2	-346	-694	-346	653	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGTTCTGGCTGTGT	232	False	NA	NA	False	AAGAAA	-3	NA	140907305	140913893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140908180_140912822
ES.32265.1	chr7	-	1335	1	FSM	ENSMUSG00000065551.3	ENSMUST00000083617.3	110	1	-217	-1008	-217	1008	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGCTTGCTTGGTGGTTC	NA	False	NA	NA	False	AGTAAA	-15	NA	140801623	140800288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140800300_140801600
ES.32266.1	chr7	-	175	1	Intergenic	novelGene_26366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140804765	140804590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140804600_140804800
ES.32267.1	chr7	-	562	1	Intergenic	novelGene_26367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATGTACTATACTTCTA	NA	False	NA	NA	False	NA	NA	NA	140811975	140811413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140811400_140812000
ES.32268.1	chr7	-	177	1	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	6201	False	NA	NA	False	NA	NA	NA	140815957	140815780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140815800_140816000
ES.32269.1	chr7	-	859	2	Intergenic	novelGene_26368	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAAACCAAACAAATAA	3775	False	NA	NA	False	NA	NA	NA	140896635	140822190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140822208_140895793
ES.32269.10	chr7	-	1699	10	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	45.0209827623619	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140907426	140877092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140903994_140904093_140907191
ES.32269.11	chr7	-	5731	11	ISM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-497	0	-479	0	intron_retention	FALSE	canonical	3	74	junction_2	11.2911469745106	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140908082	140877092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994
ES.32269.12	chr7	-	6467	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-494	-2	intron_retention	FALSE	canonical	0	0	junction_10	32.6557804990173	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908097	140877094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.13	chr7	-	5412	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-514	-2	intron_retention	FALSE	canonical	0	0	junction_10	42.7906531850123	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGTTGTCAAGCCAT	NA	False	NA	-4	True	AATAAA	-27	NA	140908117	140877094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.14	chr7	-	2849	14	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-482	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.8210421363433	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908085	140877095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894495_140894538_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140904530_140907191
ES.32269.15	chr7	-	2842	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	-710	3	-692	2	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908295	140877095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ES.32269.16	chr7	-	2580	12	NNC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-415	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	41.8201580560704	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908018	140877095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902537_140902802_140902933_140903994_140904093_140907191
ES.32269.17	chr7	-	5653	13	NIC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-496	2	intron_retention	FALSE	canonical	0	0	junction_12	44.9793162341191	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908099	140877095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140894990_140895161_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.2	chr7	-	2488	3	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAACTGTAAGGCACTT	NA	False	NA	NA	False	NA	NA	NA	140828631	140822917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140823814_140826763_140826857_140827132
ES.32269.22	chr7	-	5512	12	NNC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-510	2	intron_retention	FALSE	canonical	0	0	junction_9	41.8201580560704	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGTTGTCAAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	140908113	140877095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902537_140902802_140902933_140903994_140904093_140904354
ES.32269.23	chr7	-	2040	13	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-496	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	40.4298947424908	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAATGTTGTCAAGCC	NA	False	NA	-6	True	AATAAA	-25	NA	140908099	140877096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140904530_140907971
ES.32269.24	chr7	-	5449	12	NNC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-474	1	intron_retention	FALSE	canonical	0	0	junction_8	41.6244524447147	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAATGTTGTCAAGCC	NA	False	NA	-6	True	AATAAA	-25	NA	140908077	140877096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902385_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.26	chr7	-	5485	12	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-496	0	intron_retention	FALSE	canonical	0	0	junction_11	38.2536121559155	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGAATGTTGTCAAGC	NA	False	NA	-7	True	AATAAA	-24	NA	140908099	140877097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904347
ES.32269.27	chr7	-	2193	13	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-497	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	40.4298947424908	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGAATGTTGTCAAGC	NA	False	NA	-7	True	AATAAA	-24	NA	140908100	140877097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140904530_140907818
ES.32269.29	chr7	-	5665	13	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-541	-2	intron_retention	FALSE	canonical	0	0	junction_2	47.0994072857257	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACCTGAATGTTGTCAA	NA	False	NA	-9	True	AATAAA	-22	NA	140908144	140877099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140889522_140889664_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.3	chr7	-	4856	1	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAACTGTAAGGCACTT	NA	False	NA	NA	False	NA	NA	NA	140827773	140822917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140822900_140827800
ES.32269.30	chr7	-	4398	14	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-479	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.8210421363433	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCCATACCTGAATGTT	NA	False	NA	-14	True	AATAAA	-17	NA	140908082	140877104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894495_140894538_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354_140906091_140907191
ES.32269.31	chr7	-	2664	13	NNC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-496	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	44.5890962007529	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAATAAAACTCCCACC	NA	False	NA	-29	True	AATAAA	-2	NA	140908099	140877119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894495_140894538_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ES.32269.32	chr7	-	2776	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-1272	-772	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	33.4611715276079	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGCTGTCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	140905317	140881003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.33	chr7	-	509	1	Intergenic	novelGene_26374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTTCAAAGAAGTCGG	NA	False	NA	NA	False	AATAAA	-13	NA	140884819	140884310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140884300_140884800
ES.32269.34	chr7	-	5266	12	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-464	0	intron_retention	FALSE	canonical	0	0	junction_11	50.871252171739	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	-28	True	GATAAA	-16	NA	140908067	140890205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140894990_140895161_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.35	chr7	-	5048	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-470	0	intron_retention	FALSE	canonical	0	0	junction_1	43.7708807313721	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	-28	True	GATAAA	-16	NA	140908073	140890205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890321_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.36	chr7	-	5145	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-513	0	intron_retention	FALSE	canonical	0	0	junction_10	42.9842994592212	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTTTGGACTTTT	NA	False	NA	-28	True	GATAAA	-16	NA	140908116	140890205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.37	chr7	-	2296	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-502	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.9842994592212	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGCTTTGGACTTT	NA	False	NA	-29	True	GATAAA	-15	NA	140908105	140890206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ES.32269.38	chr7	-	3151	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	1625	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.1693886197448	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTGCTTTGGACTTT	NA	False	NA	-29	True	GATAAA	-15	NA	140905781	140890206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890923_140893132_140893262_140894246_140894376_140894495_140894538_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.39	chr7	-	5486	4	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	2732	-7	intron_retention	FALSE	canonical	2	4	junction_1	51.8137690837741	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTCTGTGTGCTTTG	1217	False	NA	-35	True	GATAAA	-9	NA	140899193	140890212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890375_140890674_140890923_140893132_140893262_140894246
ES.32269.4	chr7	-	3813	9	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAACTGTAAGGCACTT	NA	False	NA	NA	False	NA	NA	NA	140839876	140822917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140823814_140826763_140826857_140827132_140827307_140828289_140828421_140834774_140834903_140836408_140836591_140836713_140836834_140837254_140837410_140837942
ES.32269.40	chr7	-	1558	11	NNC	ENSMUSG00000058886.10	novel	2265	11	NA	NA	-469	-327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.1693886197448	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATGAAACATTTTGTTT	NA	False	NA	NA	False	AATACA	-17	NA	140904514	140890532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140890923_140893132_140893262_140894246_140894376_140894495_140894538_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.5	chr7	-	1479	4	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140828637	140822948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140823806_140826756_140826857_140827132_140827307_140828289
ES.32269.6	chr7	-	4430	3	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140828637	140822948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140826857_140827132_140827307_140828289
ES.32269.7	chr7	-	3125	1	Antisense	novelGene_ENSMUSG00000038611.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAAACAAAACCA	NA	False	NA	NA	False	AAAACA	-15	NA	140828637	140825512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_140825500_140828600
ES.32269.8	chr7	-	5556	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-562	4	intron_retention	FALSE	canonical	0	0	junction_11	32.0206544912746	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTCAAGCCATTTTATA	NA	False	NA	2	True	AATAAA	-33	NA	140908165	140877088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.32269.9	chr7	-	5626	13	NIC	ENSMUSG00000058886.10	novel	2121	13	NA	NA	-493	2	intron_retention	FALSE	canonical	0	0	junction_2	47.0994072857257	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTCAAGCCATTTTA	NA	False	NA	0	True	AATAAA	-31	NA	140908096	140877090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140877530_140881512_140881603_140887399_140887541_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
ES.3227.1	chr10	+	5270	4	Antisense	novelGene_ENSMUSG00000061032.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78235411	78241729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78238278_78238442_78238544_78239340_78241316_78241401
ES.3227.2	chr10	+	1799	2	Antisense	novelGene_ENSMUSG00000061032.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78239767	78241694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78241121_78241248
ES.3227.3	chr10	+	1962	1	Antisense	novelGene_ENSMUSG00000061032.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78239767	78241729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78239800_78241700
ES.32270.1	chr7	+	1371	2	FSM	ENSMUSG00000025505.17	ENSMUST00000134221.2	749	2	386	-1008	386	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGTCTTCATTATA	6883	False	NA	NA	False	AATAAA	-18	NA	140913956	140917068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140914017_140915757
ES.32271.1	chr7	+	3210	22	NNC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	-170	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.7063476853626	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918622	140942933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140918668_140918818_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.10	chr7	+	3485	4	ISM	ENSMUSG00000025504.15	ENSMUST00000210251.2	1042	5	8	-1699	1	1699	intron_retention	FALSE	canonical	3	88	junction_3	4.96655480858378	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTGACTTCACTAGTC	NA	False	NA	NA	False	NA	NA	NA	140918900	140926114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838
ES.32271.12	chr7	+	3689	18	NIC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	8	-5	intron_retention	FALSE	canonical	3	69	junction_6	10.094364456053	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTAGATATCTGTTT	NA	False	NA	2	True	AATAAA	-14	NA	140918907	140942928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937605_140937698_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.13	chr7	+	3018	20	NIC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	20.8853883369062	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGATATCTGTTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	140918907	140942931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.14	chr7	+	3032	21	NNC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.0912304050759	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGATATCTGTTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	140918907	140942931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140934979_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.15	chr7	+	2706	19	NIC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	-5	-398	intron_retention	FALSE	canonical	3	69	junction_6	9.96784955200258	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTGTATTATTTTATA	NA	False	NA	NA	False	NA	NA	NA	140918911	140942182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941674_140941760_140941894_140942035
ES.32271.16	chr7	+	3144	20	NIC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	0	-3	intron_retention	FALSE	canonical	3	69	junction_5	9.99113180182508	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAGATATCTGTTTCT	NA	False	NA	4	True	AATAAA	-16	NA	140918916	140942930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.17	chr7	+	3399	19	NIC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_6	10.5999068246545	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918916	140942933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.18	chr7	+	3114	21	NIC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	20.0912916458848	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTAGATATCTGTTT	NA	False	NA	2	True	AATAAA	-14	NA	140918917	140942928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941088_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.2	chr7	+	3327	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	-135	-1	-135	1	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATATCTGTTTCTTGGG	NA	False	NA	8	True	AATAAA	-20	NA	140918657	140942934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.20	chr7	+	3325	21	NIC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_1	27.2367398930195	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAACTTAGATATCTGTT	NA	False	NA	1	True	AATAAA	-13	NA	140918917	140942927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140920059_140920099_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.21	chr7	+	1218	10	NNC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	20	1009	intron_retention	FALSE	canonical	0	0	junction_9	26.4341716741563	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTAGGCACACACTAAGCT	NA	False	NA	NA	False	NA	NA	NA	140918938	140936851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140918972_140921805_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936688
ES.32271.22	chr7	+	3190	21	NNC	ENSMUSG00000025504.15	novel	1652	5	NA	NA	77	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8611480987984	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATATCTGTTTCTTGGGGT	NA	False	NA	10	True	AATAAA	-22	NA	140918995	140942936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140919171_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.23	chr7	+	3176	21	NNC	ENSMUSG00000025504.15	novel	1652	5	NA	NA	1326	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8611480987984	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGATATCTGTTTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	140920244	140942932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140920410_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.24	chr7	+	3077	21	NNC	ENSMUSG00000025504.15	novel	1652	5	NA	NA	1769	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.8611480987984	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140920687	140942933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140920753_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.25	chr7	+	2511	20	NNC	ENSMUSG00000025504.15	novel	1652	5	NA	NA	1811	-397	intron_retention	FALSE	canonical	0	0	junction_1	21.389411520838	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTATTATTTTATAC	NA	False	NA	NA	False	NA	NA	NA	140920729	140942183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140920753_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.26	chr7	+	212	1	Intergenic	novelGene_26375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGGGCTAGAGAGAT	7421	False	NA	NA	False	TTTAAA	-10	NA	140928361	140928573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140928400_140928600
ES.32271.27	chr7	+	173	1	Intergenic	novelGene_26376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	140932083	140932256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140932100_140932300
ES.32271.28	chr7	+	210	1	Intergenic	novelGene_26377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACGGTAGGCACACACT	NA	False	NA	NA	False	NA	NA	NA	140936636	140936846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140936600_140936800
ES.32271.29	chr7	+	2054	10	ISM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	18284	5	-832	-5	3prime_fragment	FALSE	canonical	3	76	junction_8	10.0455751575962	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTAGATATCTGTTT	NA	False	NA	2	True	AATAAA	-14	NA	140937076	140942928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.3	chr7	+	3285	21	NNC	ENSMUSG00000025504.15	novel	3191	21	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.1553184802309	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918694	140942933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922898_140934856_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.4	chr7	+	4654	17	NIC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	6	-5	intron_retention	FALSE	canonical	3	69	junction_5	11.1186779789685	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTAGATATCTGTTT	NA	False	NA	2	True	AATAAA	-14	NA	140918874	140942928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140921888_140921967_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941674_140941760_140941894_140942035
ES.32271.5	chr7	+	2351	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	90	750	-10	-397	multi-exon	FALSE	canonical	3	69	junction_6	10.2434125173206	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGTATTATTTTATAC	NA	False	NA	NA	False	NA	NA	NA	140918882	140942183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.6	chr7	+	3325	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	16	0	-8	0	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918884	140942933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.8	chr7	+	4298	17	NIC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	69	junction_4	10.2802526111959	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAGATATCTGTTTCT	NA	False	NA	4	True	AATAAA	-16	NA	140918897	140942930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140918972_140921805_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ES.32271.9	chr7	+	3991	17	NNC	ENSMUSG00000025504.15	novel	3341	20	NA	NA	1	-2	intron_retention	TRUE	non_canonical	0	0	junction_9	23.0934751336822	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGATATCTGTTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	140918900	140942931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936629_140936853_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941674_140941760_140941894_140942035
ES.32272.1	chr7	+	1279	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	-41	-9	-41	9	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACCGTCTTTGTCACC	3799	False	NA	27	True	ATTAAA	-26	NA	140972070	140982890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.12	chr7	+	1220	8	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1299.86074607385	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCTGTTTCATTTCACC	3841	False	NA	15	True	ATTAAA	-14	NA	140972112	140982878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972232_140975961_140976086_140978407_140978518_140980207_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.13	chr7	+	1165	8	NNC	ENSMUSG00000025503.6	novel	1362	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	1285.53466999342	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTTCATTTCACCG	3841	False	NA	16	True	ATTAAA	-15	NA	140972112	140982879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981554_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.15	chr7	+	1017	7	NIC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	1330.13395315409	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCTGTTTCATTT	3847	False	NA	11	True	ATTAAA	-10	NA	140972118	140982874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140982096_140982243_140982656
ES.32272.16	chr7	+	1193	8	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1279.74382002726	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGCTGTTTCATTT	3855	False	NA	11	True	ATTAAA	-10	NA	140972126	140982874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982670
ES.32272.17	chr7	+	1137	8	NNC	ENSMUSG00000025503.6	novel	777	3	NA	NA	234	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1292.73151717988	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTCATTTCACCGT	4118	False	NA	17	True	ATTAAA	-16	NA	140972389	140982880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972419_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.18	chr7	+	318	1	Intergenic	novelGene_26378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	680	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGATTTATTTATT	877	False	NA	NA	False	AATAAA	-24	NA	140977275	140977593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140977300_140977600
ES.32272.19	chr7	+	2023	4	NIC	ENSMUSG00000025503.6	novel	915	6	NA	NA	-173	-1	intron_retention	FALSE	canonical	3	3450	junction_1	123.191810694633	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTCATTTCACCGT	2769	False	NA	17	True	ATTAAA	-16	NA	140979167	140982880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140980333_140981493_140981670_140981784_140982243_140982656
ES.32272.3	chr7	+	3593	7	NIC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	-35	7	intron_retention	FALSE	canonical	3	3267	junction_2	234.317922679613	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCACCGTCTTTGTCA	3805	False	NA	25	True	ATTAAA	-24	NA	140972076	140982888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140972232_140975961_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.5	chr7	+	1283	8	NNC	ENSMUSG00000025503.6	novel	1362	9	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	1254.05616187747	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTTCATTTCACCG	3810	False	NA	16	True	ATTAAA	-15	NA	140972081	140982879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982070_140982243_140982656
ES.32272.7	chr7	+	2416	7	NIC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	3267	junction_3	227.296001333552	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTCATTTCACCGT	3813	False	NA	17	True	ATTAAA	-16	NA	140972084	140982880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140981670_140981784_140981983_140982096_140982243_140982656
ES.32272.8	chr7	+	1191	8	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	-27	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1293.42147115347	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTCATTTCACCGT	3813	False	NA	17	True	ATTAAA	-16	NA	140972084	140982880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_140972204_140975997_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ES.32273.1	chr7	+	171	1	Intergenic	novelGene_26379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATAAATAAAAATTGGG	7413	False	NA	NA	False	NA	NA	NA	140983811	140983982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_140983800_140984000
ES.32274.1	chr7	-	188	1	Intergenic	novelGene_26380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATGAAAAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	140984690	140984502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140984500_140984700
ES.32275.1	chr7	+	748	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	213	junction_1	6078.86463494623	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2078	False	NA	26	True	AATAAA	-19	NA	141027243	141031262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141027602_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ES.32275.10	chr7	+	3364	3	NIC	ENSMUSG00000025508.14	novel	964	5	NA	NA	-12	0	intron_retention	FALSE	canonical	3	11307	junction_1	108	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2404	False	NA	26	True	AATAAA	-19	NA	141027569	141031262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141027621_141027820_141031016_141031144
ES.32275.11	chr7	+	2788	3	FSM	ENSMUSG00000025508.14	ENSMUST00000137307.2	465	3	-7	-2316	-7	-6	multi-exon	FALSE	canonical	3	11307	junction_1	1844.5	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGTGGCCTTTAAAC	2409	False	NA	20	True	AATAAA	-13	NA	141027574	141031256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027621_141027820_141027945_141028638
ES.32275.12	chr7	+	645	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	-187	-9	-6	9	multi-exon	FALSE	canonical	3	11523	junction_3	1651.02843370091	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTTGTCAACATGCG	2410	False	NA	36	True	AATAAA	-29	NA	141027575	141031272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ES.32275.13	chr7	+	419	5	FSM	ENSMUSG00000025508.14	ENSMUST00000106004.8	421	5	-1	3	-1	-2	multi-exon	FALSE	canonical	3	34	junction_1	6154.22628666675	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCCTTTAAACATTT	2458	False	NA	24	True	AATAAA	-17	NA	141027623	141031260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027655_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ES.32275.2	chr7	+	758	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	-19	225	-19	10	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTTGTCAACATGCGA	2098	False	NA	37	True	AATAAA	-30	NA	141027263	141031273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ES.32275.3	chr7	+	3766	2	FSM	ENSMUSG00000064666.3_ENSMUSG00000025508.14	ENSMUST00000140099.2	786	2	-247	-2733	14	0	multi-exon	FALSE	canonical	3	11307	junction_1	0	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2131	False	NA	26	True	AATAAA	-19	NA	141027296	141031262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027621_141027820
ES.32275.4	chr7	+	3836	2	FSM	ENSMUSG00000064666.3_ENSMUSG00000025508.14	ENSMUST00000134636.2	399	2	-3437	0	15	0	multi-exon	FALSE	canonical	3	11523	junction_1	0	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2132	False	NA	26	True	AATAAA	-19	NA	141027297	141031262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141031016_141031144
ES.32275.5	chr7	+	2908	4	NIC	ENSMUSG00000025508.14	novel	964	5	NA	NA	43	-6	intron_retention	FALSE	canonical	3	11307	junction_1	1690.40120155608	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGTGGCCTTTAAAC	2160	False	NA	20	True	AATAAA	-13	NA	141027325	141031256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141027621_141027820_141027945_141028638_141031016_141031144
ES.32275.6	chr7	+	1369	4	NIC	ENSMUSG00000025508.14	novel	964	5	NA	NA	53	0	intron_retention	FALSE	canonical	3	11307	junction_1	1717.7060283995	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTTTAAACATTTTG	2170	False	NA	26	True	AATAAA	-19	NA	141027335	141031262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141027621_141027820_141028688_141030916_141031016_141031144
ES.32275.9	chr7	+	3686	1	FSM	ENSMUSG00000064666.3	ENSMUST00000082732.3	137	1	-1146	-2403	-1146	2403	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTGGCCTTTAAA	2404	False	NA	19	True	AATAAA	-12	NA	141027569	141031255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141027600_141031300
ES.32276.1	chr7	+	2036	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	-54	643	-54	-3	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCTGCATGTTACCCT	9891	False	NA	25	True	AATAAA	-26	NA	141035056	141040013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ES.32276.2	chr7	+	3974	7	NIC	ENSMUSG00000025509.16	novel	2048	10	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	56	junction_2	7.69018133003955	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTTCCTCACTTCT	9929	False	NA	13	True	AATAAA	-14	NA	141035094	141040001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141039203_141039301
ES.32276.3	chr7	+	3758	8	NIC	ENSMUSG00000025509.16	novel	2048	10	NA	NA	0	-6	intron_retention	FALSE	canonical	3	56	junction_2	8.8109393972053	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCCTTCCTCACTT	9954	False	NA	11	True	AATAAA	-12	NA	141035119	141039999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ES.32277.1	chr7	+	1617	10	NIC	ENSMUSG00000048200.13	novel	1158	8	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	4.21929723245501	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTTGGCTCTTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	141041829	141046524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141041847_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
ES.32277.2	chr7	+	1427	3	NIC	ENSMUSG00000048200.13	novel	1698	10	NA	NA	-150	-1	intron_retention	FALSE	canonical	3	13	junction_2	1	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTTGGCTCTTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	141044856	141046525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141045270_141045431_141045599_141045678
ES.32278.1	chr7	+	1792	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-68	-16	-38	6	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	14	True	NA	NA	NA	141047266	141051392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.10	chr7	+	1232	5	NNC	ENSMUSG00000025510.15	novel	1708	8	NA	NA	-13	6	intron_retention	FALSE	non_canonical	0	0	junction_3	116.159373276546	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	14	True	NA	NA	NA	141047321	141051392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141047380_141048331_141048460_141049167_141049196_141050292_141050382_141050463
ES.32278.11	chr7	+	1904	7	ISM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	40	3	-5	0	intron_retention	FALSE	canonical	3	98	junction_1	73.4226728530696	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACTCGAATCAGCTTGC	NA	False	NA	5	True	NA	NA	NA	141047345	141051383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222
ES.32278.12	chr7	+	1749	7	ISM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	926	-15	70	5	3prime_fragment	FALSE	canonical	3	276	junction_3	12.6359276140166	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTTGCTGACAGGA	236	False	NA	13	True	NA	NA	NA	141048260	141051391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.13	chr7	+	1693	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	-67	-7	-67	6	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	643	False	NA	14	True	NA	NA	NA	141048667	141051392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.14	chr7	+	1573	7	NNC	ENSMUSG00000025510.15	novel	1619	7	NA	NA	4	2	intron_retention	FALSE	canonical	3	18	junction_6	125.986000104068	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATCAGCTTGCTGACA	721	False	NA	10	True	NA	NA	NA	141048745	141051388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050344_141050463
ES.32278.15	chr7	+	1743	6	ISM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	240	-6	233	5	3prime_fragment	FALSE	canonical	3	276	junction_2	13.8419651783986	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTTGCTGACAGGA	950	False	NA	13	True	NA	NA	NA	141048974	141051391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.16	chr7	+	1085	2	ISM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	1486	-2	-75	1	3prime_fragment	FALSE	canonical	3	276	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATCAGCTTGCTGAC	2196	False	NA	9	True	NA	NA	NA	141050220	141051387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141050382_141050463
ES.32278.2	chr7	+	1861	7	ISM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-60	-11	-30	1	intron_retention	FALSE	canonical	3	214	junction_1	31.3510588160733	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATCAGCTTGCTGAC	NA	False	NA	9	True	NA	NA	NA	141047274	141051387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222
ES.32278.3	chr7	+	1130	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	-60	638	-30	366	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGCTACCCTCATGC	NA	False	NA	NA	False	NA	NA	NA	141047274	141050738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.4	chr7	+	2167	6	NIC	ENSMUSG00000025510.15	novel	1708	8	NA	NA	-25	6	intron_retention	FALSE	canonical	3	214	junction_1	30.2125801612507	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	14	True	NA	NA	NA	141047279	141051392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141050139_141050222_141050382_141050463
ES.32278.5	chr7	+	1891	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	-21	-5	-20	5	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCTTGCTGACAGGA	NA	False	NA	13	True	NA	NA	NA	141047284	141051391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.6	chr7	+	1837	8	NNC	ENSMUSG00000025510.15	novel	1865	8	NA	NA	-8	1	intron_retention	FALSE	canonical	3	18	junction_7	108.681335348169	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATCAGCTTGCTGAC	NA	False	NA	9	True	NA	NA	NA	141047296	141051387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050344_141050463
ES.32278.7	chr7	+	1814	8	NNC	ENSMUSG00000025510.15	novel	1708	8	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_2	101.205186605818	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATCAGCTTGCTGAC	NA	False	NA	9	True	NA	NA	NA	141047304	141051387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141047380_141048331_141048460_141049102_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.8	chr7	+	2032	7	NIC	ENSMUSG00000025510.15	novel	1865	8	NA	NA	0	6	intron_retention	FALSE	canonical	3	214	junction_1	31.3510588160733	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCTTGCTGACAGGAC	NA	False	NA	14	True	NA	NA	NA	141047305	141051392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049925_141050033_141050139_141050222_141050382_141050463
ES.32278.9	chr7	+	1291	9	NIC	ENSMUSG00000025510.15	novel	1708	8	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	92.1187243452709	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGAATCAGCTTGCTGAC	NA	False	NA	9	True	NA	NA	NA	141047320	141051387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463_141050743_141051184
ES.32279.1	chr7	+	1452	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	12	2	12	-2	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	3503	False	NA	43	True	NA	NA	NA	141055164	141073338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.32279.2	chr7	+	1698	9	NNC	ENSMUSG00000025511.16	novel	1466	8	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.220764566991	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	3535	False	NA	43	True	NA	NA	NA	141055196	141073338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141055411_141062399_141062480_141066071_141066350_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.32279.4	chr7	+	1269	8	NIC	ENSMUSG00000025511.16	novel	1157	7	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	85.0104435360979	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	3749	False	NA	43	True	NA	NA	NA	141055410	141073338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141055474_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.32279.5	chr7	+	1413	8	NIC	ENSMUSG00000025511.16	novel	1157	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	87.3690273425057	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACTGAGGAAGTTCTT	3792	False	NA	39	True	NA	NA	NA	141055453	141073334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141055665_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.32279.6	chr7	+	1683	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	-54	-472	-54	-2	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	600	False	NA	43	True	NA	NA	NA	141061922	141073338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.32279.7	chr7	+	1778	6	NIC	ENSMUSG00000025511.16	novel	1157	7	NA	NA	-49	-2	intron_retention	FALSE	canonical	3	206	junction_2	26.6953179415417	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	605	False	NA	43	True	NA	NA	NA	141061927	141073338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071819_141071892_141071977_141072797
ES.32279.9	chr7	+	1556	6	NIC	ENSMUSG00000025511.16	novel	1157	7	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.533442766411	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGAGGAAGTTCTTTC	650	False	NA	41	True	NA	NA	NA	141061972	141073336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141062480_141069464_141069657_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ES.3228.1	chr10	-	1964	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	278.451176781927	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCCATTTTTGG	NA	False	NA	-15	True	AATAAA	-23	NA	78248861	78236215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237801_78238431_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.10	chr10	-	4901	3	NIC	ENSMUSG00000061032.10	novel	1852	12	NA	NA	-432	-1	intron_retention	FALSE	canonical	3	973	junction_1	52.5	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	2635	False	NA	-20	True	AATAAA	-18	NA	78242004	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78238542_78239338_78241314_78241399
ES.3228.11	chr10	-	1585	8	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	412.043488887634	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	NA	False	NA	-20	True	AATAAA	-18	NA	78248814	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78246795_78246858_78247237_78247321_78248653
ES.3228.13	chr10	-	4343	10	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_2	304.409000369852	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	NA	False	NA	-20	True	AATAAA	-18	NA	78248840	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237801_78238431_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78246858_78247237_78247321_78248653
ES.3228.14	chr10	-	1948	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	367.874551920098	499	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCTGCTTCTCCCAT	NA	False	NA	-21	True	AATAAA	-17	NA	78248847	78236221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245046_78246799_78246858_78247237_78247321_78248653
ES.3228.15	chr10	-	9866	6	NIC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	12	-3	intron_retention	FALSE	canonical	3	879	junction_4	65.5041983387325	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGCTGCTTCTCCCA	NA	False	NA	-22	True	AATAAA	-16	NA	78248812	78236222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78238542_78239338_78241121_78241248_78241314_78241399_78246858_78247237_78247321_78248653
ES.3228.16	chr10	-	5597	8	NNC	ENSMUSG00000061032.10	novel	1852	12	NA	NA	-888	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	336.854355980232	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGCTGCTTCTCCCA	NA	False	NA	-22	True	AATAAA	-16	NA	78246313	78236222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78244309_78244967
ES.3228.18	chr10	-	3677	11	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-10	-4	intron_retention	FALSE	canonical	0	0	junction_2	290.197191578416	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGCTGCTTCTCCC	NA	False	NA	-23	True	AATAAA	-15	NA	78248836	78236223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237801_78238431_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78246858_78247237_78247321_78248653
ES.3228.19	chr10	-	1921	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.451176781927	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGCTGCTTCTCCC	NA	False	NA	-23	True	AATAAA	-15	NA	78248818	78236223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237821_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.2	chr10	-	1978	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.451176781927	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	False	NA	-17	True	AATAAA	-21	NA	78248865	78236217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.20	chr10	-	2370	12	NIC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	15	-4	intron_retention	FALSE	canonical	3	782	junction_1	70.8264086714077	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGCTGCTTCTCCC	NA	False	NA	-23	True	AATAAA	-15	NA	78248809	78236223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78236819_78237683_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.22	chr10	-	2018	11	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	282.362904787438	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGCTGCTTCTCCC	NA	False	NA	-23	True	AATAAA	-15	NA	78248825	78236223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.23	chr10	-	1921	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	419.805681139924	499	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGGCTGCTTCTCCC	NA	False	NA	-23	True	AATAAA	-15	NA	78248823	78236223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237687_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241304_78241394_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.4	chr10	-	3822	11	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	-87	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	290.197191578416	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTCCCATTTT	NA	False	NA	-18	True	AATAAA	-20	NA	78248964	78236218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78246858_78247237_78247321_78248653
ES.3228.5	chr10	-	5021	10	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	304.855521335745	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTCCCATTTT	NA	False	NA	-18	True	AATAAA	-20	NA	78248823	78236218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78246858_78247237_78247321_78248653
ES.3228.7	chr10	-	7042	9	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	318.054142403459	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	NA	False	NA	-20	True	AATAAA	-18	NA	78248810	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78246858_78247237_78247321_78248653
ES.3228.8	chr10	-	1907	12	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	278.451176781927	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	NA	False	NA	-20	True	AATAAA	-18	NA	78248798	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237812_78238431_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ES.3228.9	chr10	-	5844	6	NNC	ENSMUSG00000061032.10	novel	1852	12	NA	NA	866	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	388.124516102758	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTGCTTCTCCCATT	80	False	NA	-20	True	AATAAA	-18	NA	78244559	78236220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78236819_78237683_78237803_78238421_78238542_78239338_78241121_78241248_78241314_78241399
ES.32280.1	chr7	-	2231	8	NNC	ENSMUSG00000051007.16	novel	1898	8	NA	NA	-6	377	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	61.0316077361325	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGGCTCAGGACTCTT	5477	False	NA	NA	False	NA	NA	NA	140994009	140987329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140988878_140989001_140989110_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ES.32280.10	chr7	-	333	2	Genic_Genomic	ENSMUSG00000110400.2	novel	2201	1	NA	NA	1929	103663	multi-exon	TRUE	canonical	0	0	junction_1	0	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGCTAGGATCAAA	3984	False	NA	NA	False	NA	NA	NA	141096587	140992652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_140992938_141096539
ES.32280.101	chr7	-	3983	14	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-14	-2	intron_retention	FALSE	canonical	0	0	junction_4	21.6753889286236	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023952	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019752_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141023267_141023881
ES.32280.102	chr7	-	5792	2	NIC	ENSMUSG00000025507.14	novel	3699	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	61	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023922	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141020280_141020370
ES.32280.103	chr7	-	3878	13	NNC	ENSMUSG00000025507.14	novel	2900	15	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_7	23.9234891546642	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAGACAGAATACC	NA	False	NA	-17	True	NA	NA	NA	141023921	141018041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141019191_141019290_141019405_141019483_141019603_141019704_141019825_141019915_141019967_141020066_141020280_141020370_141020435_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
ES.32280.104	chr7	-	5135	8	NIC	ENSMUSG00000025507.14	novel	3699	13	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	54	junction_6	7.48058712090631	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGTGAGACAGAATA	NA	False	NA	-19	True	NA	NA	NA	141023913	141018043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141020280_141020370_141020519_141020598_141021015_141021085_141021443_141021524
ES.32280.105	chr7	-	3016	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	21.0656117879353	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGTGTGAGACAGAAT	NA	False	NA	-20	True	NA	NA	NA	141023935	141018044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022182_141022880_141023267_141023881
ES.32280.106	chr7	-	3420	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	0	-8	intron_retention	FALSE	canonical	3	24	junction_12	13.5103890486136	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTGTGTGAGACAGAA	NA	False	NA	-21	True	NA	NA	NA	141023921	141018045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.107	chr7	-	4246	14	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	6	junction_6	16.6623268511536	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTGTGTGAGACAGAA	NA	False	NA	-21	True	NA	NA	NA	141023926	141018045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880
ES.32280.109	chr7	-	3732	14	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	7	-8	intron_retention	FALSE	canonical	1	1	junction_7	18.3118935063249	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTGTGTGAGACAGAA	NA	False	NA	-21	True	NA	NA	NA	141023931	141018045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020515_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.11	chr7	-	155	1	Intergenic	novelGene_26381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	140999630	140999475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_140999500_140999600
ES.32280.111	chr7	-	3330	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.654281605632	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTGTGAGACAG	NA	False	NA	-23	True	NA	NA	NA	141023908	141018047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021313_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.112	chr7	-	3940	14	NIC	ENSMUSG00000025507.14	novel	3263	15	NA	NA	11	-30	intron_retention	FALSE	canonical	2	4	junction_12	17.2911031608949	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAATAAAATAAAAGCTAT	NA	False	NA	-43	True	NA	NA	NA	141023894	141018067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880
ES.32280.113	chr7	-	1828	3	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	2	375	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	536	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCGAGTGCTTATACAT	8002	False	NA	NA	False	NA	NA	NA	141055043	141051397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141051749_141051943_141053318_141054940
ES.32280.114	chr7	-	1651	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	-1	0	1	multi-exon	FALSE	canonical	3	1072	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	8000	False	NA	NA	False	NA	NA	NA	141055045	141051771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141053318_141054940
ES.32280.115	chr7	-	625	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	-223	1248	-223	-1248	multi-exon	FALSE	canonical	3	1072	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTCCATGTCTGTGC	7777	False	NA	-9	True	AGTAAA	-41	NA	141055268	141053020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141053318_141054940
ES.32280.116	chr7	-	456	3	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-222	-1270	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	528	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGTCTAACTTCCAAGG	7778	False	NA	-31	True	AGTAAA	-19	NA	141055267	141053042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141053318_141054940_141055056_141055201
ES.32280.117	chr7	-	8833	13	FSM	ENSMUSG00000025512.16	ENSMUST00000166082.8	4222	13	17	-4628	-8	4627	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATAAGAGGAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	141119753	141068421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.118	chr7	-	4184	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-2	0	1	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGGTGTCTGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	141119731	141073048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.119	chr7	-	4249	14	NNC	ENSMUSG00000025512.16	novel	4222	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	77.6595513582184	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCTGGTGTCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	141119731	141073049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141095818_141095885_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.12	chr7	-	1809	2	FSM	ENSMUSG00000060240.13	ENSMUST00000137488.2	1697	2	-115	3	-42	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAAAGGCTGGGCTGCT	8566	False	NA	NA	False	AATAAA	-8	NA	141009446	141006366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141007917_141009187
ES.32280.120	chr7	-	3885	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	5	292	5	-290	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGCTGTACAACCTTT	NA	False	NA	NA	False	AATGAA	-14	NA	141119724	141073340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.121	chr7	-	2129	13	NNC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	-3	171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	61.4265595831496	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTGAGATTTGTGG	NA	False	NA	NA	False	CATAAA	-23	NA	141119720	141075090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106346_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.122	chr7	-	1945	14	NNC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	6	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	89.8279091064568	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCACTCCTTCATTC	NA	False	NA	-8	True	NA	NA	NA	141119711	141075247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141095818_141095885_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110127_141112731_141112887_141119685
ES.32280.123	chr7	-	1981	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-3	2204	0	9	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTCTTCACTCCTT	NA	False	NA	-13	True	NA	NA	NA	141119732	141075252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.124	chr7	-	1741	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	8	2433	-4	-172	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTGGACTTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	141119721	141075481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.125	chr7	-	1572	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	17	2593	5	319	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCTTAAGCCTGACAGG	NA	False	NA	NA	False	NA	NA	NA	141119712	141075641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.126	chr7	-	1421	13	NNC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	24	88	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	58.9031101800991	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTATGGGTCCACACG	NA	False	NA	4	True	AATATA	-27	NA	141119693	141075872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119586
ES.32280.127	chr7	-	2407	12	NIC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	-4	84	intron_retention	FALSE	canonical	3	145	junction_11	23.7190860136371	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTGCTATGGGTCCA	NA	False	NA	0	True	AATATA	-23	NA	141119721	141075876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.128	chr7	-	4890	10	NIC	ENSMUSG00000025512.16	novel	4182	13	NA	NA	-39	84	intron_retention	FALSE	canonical	3	185	junction_5	14.9228468471901	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTGCTATGGGTCCA	4928	False	NA	0	True	AATATA	-23	NA	141112886	141075876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141109615_141110062
ES.32280.129	chr7	-	1387	13	FSM	ENSMUSG00000025512.16	ENSMUST00000166082.8	4222	13	3	2832	3	79	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGACAGCTGCTATGG	NA	False	NA	-5	True	AATATA	-18	NA	141119767	141075881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.13	chr7	-	2677	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	12	0	intron_retention	TRUE	canonical	0	0	junction_10	49.7127750180977	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	480	False	NA	-19	True	AATAAA	-18	NA	141017532	141009661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016850_141017481
ES.32280.130	chr7	-	1361	13	NNC	ENSMUSG00000025512.16	novel	4222	13	NA	NA	-6	78	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	60.9527936648974	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAGACAGCTGCTATG	NA	False	NA	-6	True	AATATA	-17	NA	141119751	141075882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076051_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.131	chr7	-	1420	14	NNC	ENSMUSG00000025512.16	novel	4222	13	NA	NA	-4	77	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	77.6595513582184	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATGAGACAGCTGCTAT	NA	False	NA	-7	True	AATATA	-16	NA	141119736	141075883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141095818_141095885_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.132	chr7	-	2493	11	NNC	ENSMUSG00000025512.16	novel	1979	13	NA	NA	-1	-4900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.4636540379469	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATACTTGTCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	141119718	141080860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141082318_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.133	chr7	-	953	6	ISM	ENSMUSG00000025512.16	ENSMUST00000147610.8	6759	11	1	31885	1	4625	5prime_fragment	FALSE	canonical	3	145	junction_5	30.98128467317	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTTCTCCTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	141119731	141107194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ES.32280.14	chr7	-	2544	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	261	6	0	-1	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGCTTTAAGAGTCTG	468	False	NA	-20	True	AATAAA	-17	NA	141017544	141009662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.15	chr7	-	2145	6	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-315	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.0569505343079	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGCTTTAAGAGTCTG	5725	False	NA	-20	True	AATAAA	-17	NA	141012287	141009662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012176
ES.32280.16	chr7	-	3164	8	NIC	ENSMUSG00000019082.19	novel	3264	9	NA	NA	9	1	intron_retention	FALSE	canonical	3	72	junction_7	23.6246153191876	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTTTAAGAGTCT	477	False	NA	-21	True	AATAAA	-16	NA	141017535	141009663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.17	chr7	-	2607	10	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_4	42.1112576954353	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTGCTTTAAGAGTC	434	False	NA	-22	True	AATAAA	-15	NA	141017578	141009664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011858_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.18	chr7	-	2652	8	NIC	ENSMUSG00000019082.19	novel	743	7	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_4	40.6443007526697	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATGCTTGCTTTAAG	509	False	NA	-26	True	AATAAA	-11	NA	141017503	141009668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013505_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.19	chr7	-	2525	10	FSM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	-6	27	0	-20	multi-exon	FALSE	canonical	2	3	junction_9	39.7436228287703	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	3499	False	NA	-46	True	NA	NA	NA	141014513	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141014443
ES.32280.2	chr7	-	2293	7	FSM	ENSMUSG00000051007.16	ENSMUST00000156353.8	2348	7	6	49	-6	0	multi-exon	FALSE	canonical	3	166	junction_4	10.4721853816033	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5489	False	NA	-1	True	NA	NA	NA	140993997	140988096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140990799_140990898_140991005_140991710_140991788_140993914
ES.32280.21	chr7	-	3026	9	FSM	ENSMUSG00000019082.19	ENSMUST00000140602.8	3264	9	211	27	15	-20	multi-exon	FALSE	canonical	3	72	junction_8	22.1835383787168	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	483	False	NA	-46	True	NA	NA	NA	141017529	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.22	chr7	-	3579	8	NIC	ENSMUSG00000019082.19	novel	2546	10	NA	NA	-5	-20	intron_retention	FALSE	canonical	3	101	junction_6	15.4523626091314	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	2753	False	NA	-46	True	NA	NA	NA	141015259	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068
ES.32280.23	chr7	-	2500	10	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-8	-20	intron_retention	FALSE	canonical	3	12	junction_9	37.1154355431208	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	2767	False	NA	-46	True	NA	NA	NA	141015245	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141015200
ES.32280.24	chr7	-	2607	9	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-8	-20	intron_retention	FALSE	canonical	3	12	junction_8	39.3650781149993	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	2767	False	NA	-46	True	NA	NA	NA	141015245	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141015200
ES.32280.26	chr7	-	1635	4	NNC	ENSMUSG00000019082.19	novel	3264	9	NA	NA	-9	-20	intron_retention	FALSE	non_canonical	0	0	junction_1	42.4604391038163	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	497	False	NA	-46	True	NA	NA	NA	141017515	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141011040_141013862_141013939_141014068_141014243_141017481
ES.32280.27	chr7	-	2596	9	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-9	-20	intron_retention	FALSE	canonical	3	72	junction_8	22.1412369798979	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	497	False	NA	-46	True	NA	NA	NA	141017515	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.29	chr7	-	2429	11	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	3	-20	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	47.8493469129935	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	2761	False	NA	-46	True	NA	NA	NA	141015251	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014137_141014213_141014243_141015200
ES.32280.3	chr7	-	3099	5	NIC	ENSMUSG00000051007.16	novel	2164	6	NA	NA	-6	0	intron_retention	FALSE	canonical	3	167	junction_4	6.72681202353685	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5489	False	NA	-1	True	NA	NA	NA	140993997	140988096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140991788_140993914
ES.32280.30	chr7	-	2460	11	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	-12	-20	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	39.7386461772416	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	-3	True	NA	-46	True	NA	NA	NA	141017563	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014137_141014213_141014243_141017481
ES.32280.31	chr7	-	2582	11	NNC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	10	-20	intron_retention	FALSE	canonical	2	2	junction_10	49.3238279130888	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTCT	478	False	NA	-46	True	NA	NA	NA	141017534	141009688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141016705_141016780_141017481
ES.32280.32	chr7	-	1405	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	278	1128	17	82	multi-exon	FALSE	canonical	3	72	junction_9	20.9708792800344	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGTTCTGTCCCATCC	485	False	NA	NA	False	NA	NA	NA	141017527	141010784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ES.32280.33	chr7	-	4154	17	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3266	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.1890033742918	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTAGGCACTGATGAGT	NA	False	NA	86	True	NA	NA	NA	141027204	141017938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881_141024136_141026691
ES.32280.34	chr7	-	4712	13	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	26.3754936762645	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023937	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019118_141019210_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021313_141021387_141021443_141021524
ES.32280.35	chr7	-	3360	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7	junction_10	17.8344141067379	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023922	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.36	chr7	-	4906	6	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_5	10.4804580052591	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023918	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019191_141019290_141019405_141019483_141019603_141019704_141020280_141020370_141023267_141023881
ES.32280.37	chr7	-	4313	11	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	7	junction_8	18.6375964115548	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023946	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141020280_141020370_141020519_141020598_141021015_141021085_141021230_141021387_141021443_141021524_141023267_141023881
ES.32280.38	chr7	-	3789	11	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	24	junction_8	14.7787008901324	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023915	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.39	chr7	-	3304	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	16.7668986067456	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023922	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
ES.32280.4	chr7	-	1424	8	NNC	ENSMUSG00000051007.16	novel	1898	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	60.2725104023723	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5476	False	NA	-1	True	NA	NA	NA	140994010	140988096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990735_140990799_140990898_140991005_140991710_140991788_140993914
ES.32280.40	chr7	-	3614	15	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	7	junction_11	16.5278058842346	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023924	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.41	chr7	-	4346	12	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	112	0	intron_retention	FALSE	canonical	1	1	junction_2	23.7678162839814	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023793	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019118_141019210_141019405_141019483_141019603_141019704_141019825_141019915_141020280_141020370_141020519_141020598_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880
ES.32280.42	chr7	-	5013	8	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-16	0	intron_retention	FALSE	canonical	3	44	junction_4	6.20401450017385	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023954	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019405_141019483_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141022478_141022880
ES.32280.43	chr7	-	4384	12	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	7	junction_9	17.2808593297195	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023900	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022478_141022880
ES.32280.44	chr7	-	3949	15	NNC	ENSMUSG00000025507.14	novel	2894	15	NA	NA	6	0	intron_retention	FALSE	canonical	2	3	junction_13	20.6565698399086	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023899	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021774_141022063_141022478_141022880
ES.32280.45	chr7	-	3278	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	20.6677419075127	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023921	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019825_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.46	chr7	-	3708	13	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	7	junction_8	16.9908063375462	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023955	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020519_141020598_141020779_141020888_141021230_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.47	chr7	-	4056	14	NIC	ENSMUSG00000025507.14	novel	2894	15	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_12	17.3256317285373	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023906	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021774_141022063_141022478_141022880
ES.32280.48	chr7	-	3072	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	18.1859530651789	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023949	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022182_141022880_141023267_141023881
ES.32280.49	chr7	-	3626	15	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_12	17.934119801686	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023915	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141021927_141022063_141022478_141022880_141023267_141023881
ES.32280.5	chr7	-	1456	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	52	390	-6	0	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTTGTTT	5489	False	NA	-1	True	NA	NA	NA	140993997	140988096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ES.32280.50	chr7	-	4002	18	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3552	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	21.1188759268865	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141027490	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881_141024038_141026691_141026963_141027215
ES.32280.51	chr7	-	3990	15	FSM	ENSMUSG00000025507.14	ENSMUST00000190882.7	2894	15	-684	-412	4	0	multi-exon	FALSE	canonical	2	3	junction_13	17.0395697943202	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023917	141018025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021774_141022063_141022478_141022880
ES.32280.52	chr7	-	3474	15	NNC	ENSMUSG00000025507.14	novel	3263	15	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_14	24.2020618113079	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023913	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023787
ES.32280.53	chr7	-	3250	16	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	18.7006832911409	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023917	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020435_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.54	chr7	-	3663	15	FSM	ENSMUSG00000025507.14	ENSMUST00000131980.8	3653	15	-12	2	4	-2	multi-exon	FALSE	canonical	3	36	junction_14	11.4118180776218	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023917	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.55	chr7	-	3414	15	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	2	3	junction_12	20.700980948856	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023939	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021774_141022063_141022478_141022880_141023267_141023881
ES.32280.56	chr7	-	3844	13	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	36	junction_12	11.2138307460029	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023921	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.58	chr7	-	4435	10	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	36	junction_9	11.6247925774672	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023922	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141023267_141023881
ES.32280.59	chr7	-	4268	11	NNC	ENSMUSG00000025507.14	novel	3699	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_4	27.8273247007326	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023906	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141019829_141020143_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022497_141022880
ES.32280.61	chr7	-	3119	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.6057165746682	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023924	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021571_141022063_141022478_141022880_141023267_141023881
ES.32280.62	chr7	-	4314	11	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	36	junction_10	11.5948264325086	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023917	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021443_141021524_141023267_141023881
ES.32280.63	chr7	-	3394	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	24	junction_12	13.8808707013851	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023906	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.64	chr7	-	3189	15	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	4	-2	intron_retention	TRUE	non_canonical	0	0	junction_13	19.30488465204	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTTTGCAGAGATCAT	NA	False	NA	-3	True	NA	NA	NA	141023917	141018027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021288_141021387_141021443_141021524_141021735_141022063_141022319_141022937_141023267_141023881
ES.32280.65	chr7	-	4662	13	ISM	ENSMUSG00000025507.14	ENSMUST00000131980.8	3653	15	6	3	6	1	intron_retention	FALSE	canonical	3	40	junction_6	10.9883145002114	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023899	141018028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524
ES.32280.66	chr7	-	3640	15	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-1	1	intron_retention	FALSE	canonical	2	3	junction_5	20.5998068150244	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023922	141018028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019825_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.67	chr7	-	3778	14	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_10	18.3031668614959	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023931	141018028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021313_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.68	chr7	-	3909	12	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-1	1	intron_retention	FALSE	canonical	3	36	junction_11	11.4176896245973	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACCTTTGCAGAGATCA	NA	False	NA	-4	True	NA	NA	NA	141023906	141018028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141021288_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.69	chr7	-	3538	13	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_10	17.8574603146385	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023917	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019603_141019704_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880_141023267_141023881
ES.32280.70	chr7	-	2664	13	NNC	ENSMUSG00000025507.14	novel	2927	14	NA	NA	-197	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	19.1826020712056	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141022399	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141020160_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063
ES.32280.71	chr7	-	4634	5	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	219	0	intron_retention	FALSE	canonical	3	44	junction_3	7.79422863405995	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023014	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019405_141019483_141020519_141020598_141020779_141020888_141021443_141021524
ES.32280.72	chr7	-	3291	15	NNC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	-3	0	intron_retention	FALSE	canonical	2	3	junction_13	23.4185518644636	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023924	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022182_141022880_141023267_141023881
ES.32280.73	chr7	-	4196	13	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	36	junction_12	11.9055892569648	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023939	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141021015_141021085_141021288_141021387_141021443_141021524_141023267_141023881
ES.32280.74	chr7	-	3466	14	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	6	junction_5	18.8328053197875	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023903	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.75	chr7	-	3494	15	NNC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_7	26.2348109602957	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023916	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019118_141019210_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020161_141020343_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.76	chr7	-	3970	14	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	5	0	intron_retention	FALSE	canonical	2	4	junction_12	17.1032368298861	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023900	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880
ES.32280.77	chr7	-	3437	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	24	junction_12	13.4416729400983	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023945	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.78	chr7	-	3293	15	NNC	ENSMUSG00000025507.14	novel	2900	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.8859358102417	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023256	141018029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019118_141019210_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
ES.32280.79	chr7	-	5364	7	NIC	ENSMUSG00000025507.14	novel	2927	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	41	junction_5	8.55699843532896	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATACCTTTGCAGAGAT	NA	False	NA	-6	True	NA	NA	NA	141023937	141018030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019191_141019290_141019405_141019483_141019603_141019704_141020519_141020598_141021288_141021387_141021443_141021524
ES.32280.8	chr7	-	1135	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	41	722	-5	-317	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAATGGTGTTTTGTTTG	5478	False	NA	NA	False	NA	NA	NA	140994008	140988428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ES.32280.80	chr7	-	4161	11	NNC	ENSMUSG00000025507.14	novel	2900	15	NA	NA	107	-2	intron_retention	FALSE	canonical	0	0	junction_2	19.2291445467551	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAATACCTTTGCAGAGA	NA	False	NA	-7	True	NA	NA	NA	141023798	141018031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141019603_141019704_141019829_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
ES.32280.81	chr7	-	3293	16	NNC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	22.7615660464936	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAATACCTTTGCAGAGA	NA	False	NA	-7	True	NA	NA	NA	141023922	141018031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021774_141022063_141022478_141022880_141023267_141023881
ES.32280.83	chr7	-	3282	16	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.4783356633894	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023921	141018032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019534_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.84	chr7	-	4554	11	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	4	-3	intron_retention	FALSE	canonical	3	40	junction_6	9.92975326984513	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023917	141018032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141021443_141021524_141022478_141022880
ES.32280.85	chr7	-	5602	4	NIC	ENSMUSG00000025507.14	novel	3699	13	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	61	junction_3	0.471404520791032	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023906	141018032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019405_141019483_141019603_141019704_141020280_141020370
ES.32280.86	chr7	-	4849	7	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	0	-3	intron_retention	FALSE	canonical	3	36	junction_6	9.69106117340442	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATACCTTTGCAGAG	NA	False	NA	-8	True	NA	NA	NA	141023921	141018032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019405_141019483_141019603_141019704_141020280_141020370_141021015_141021085_141021443_141021524_141023267_141023881
ES.32280.87	chr7	-	3574	12	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_5	27.6306812339932	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	False	NA	-9	True	NA	NA	NA	141023917	141018033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141020066_141020161_141020343_141020519_141020598_141020691_141020888_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.88	chr7	-	4167	11	NNC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	6	junction_4	17.0531522012794	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	False	NA	-9	True	NA	NA	NA	141023929	141018033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.89	chr7	-	3128	15	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-5	-4	intron_retention	FALSE	canonical	2	3	junction_13	18.4253873218227	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	False	NA	-9	True	NA	NA	NA	141023926	141018033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022182_141022880_141023267_141023881
ES.32280.9	chr7	-	2756	5	NIC	ENSMUSG00000051007.16	novel	2164	6	NA	NA	3	-317	intron_retention	FALSE	canonical	3	167	junction_4	6.72681202353685	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAATGGTGTTTTGTTTG	5500	False	NA	NA	False	NA	NA	NA	140993986	140988428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140991788_140993914
ES.32280.90	chr7	-	3737	14	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	-1	2	intron_retention	FALSE	canonical	3	7	junction_10	18.4532032465686	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAGAATACCTTTGCA	NA	False	NA	-11	True	NA	NA	NA	141023906	141018035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141021735_141022063_141023267_141023881
ES.32280.91	chr7	-	4912	9	NIC	ENSMUSG00000025507.14	novel	2927	14	NA	NA	-17	2	intron_retention	FALSE	canonical	3	41	junction_6	6.91013748054263	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAGAATACCTTTGCA	NA	False	NA	-11	True	NA	NA	NA	141023955	141018035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141019405_141019483_141019603_141019704_141020280_141020370_141020519_141020598_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880
ES.32280.93	chr7	-	4366	13	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	40	junction_6	10.0111049451208	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023917	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021443_141021524_141022478_141022880
ES.32280.94	chr7	-	4437	12	NIC	ENSMUSG00000025507.14	novel	2927	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	41	junction_9	10.157438344337	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023924	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141022478_141022880
ES.32280.95	chr7	-	3340	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	7	junction_10	18.0335571552999	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023922	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021230_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ES.32280.96	chr7	-	3674	14	NIC	ENSMUSG00000025507.14	novel	3318	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	7	junction_10	16.7875693656676	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023921	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021230_141021387_141021443_141021524_141022478_141022880_141023267_141023881
ES.32280.97	chr7	-	3757	17	NNC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	-3517	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	20.9320888530027	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141027455	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141019967_141020066_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881_141024136_141027215
ES.32280.98	chr7	-	5211	7	NIC	ENSMUSG00000025507.14	novel	3699	13	NA	NA	11	-2	intron_retention	FALSE	canonical	3	54	junction_5	8.05018978382222	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023894	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019405_141019483_141019603_141019704_141020519_141020598_141021015_141021085_141021443_141021524
ES.32280.99	chr7	-	4209	9	NIC	ENSMUSG00000025507.14	novel	3653	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	36	junction_8	11.2249721603218	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGAGACAGAATACCTT	NA	False	NA	-15	True	NA	NA	NA	141023922	141018039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141018761_141018990_141019603_141019704_141020280_141020370_141020519_141020598_141021015_141021085_141021443_141021524_141022478_141022880_141023267_141023881
ES.32281.1	chr7	-	177	1	Intergenic	novelGene_26382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	141122505	141122328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_141122300_141122500
ES.32282.1	chr7	+	171	1	Intergenic	novelGene_26383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGGCTCTGTGCCACT	NA	False	NA	NA	False	NA	NA	NA	141122934	141123105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_141122900_141123100
ES.32283.1	chr7	+	177	1	Intergenic	novelGene_26384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	141124982	141125159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_141125000_141125200
ES.32284.1	chr7	-	185	1	Intergenic	novelGene_26385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATACCCTATAGGCT	NA	False	NA	NA	False	NA	NA	NA	141132650	141132465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_141132500_141132600
ES.32285.1	chr7	+	176	1	Intergenic	novelGene_26386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	271	False	NA	NA	False	NA	NA	NA	141132760	141132936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_141132800_141132900
ES.32286.11	chr7	+	2938	19	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	4	-1308	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_15	166.263224666621	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCCAGAAACAGCGCCA	9635	False	NA	7	True	ATTAAA	-20	NA	141142124	141211616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141210035_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.13	chr7	+	4635	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	161.119735479542	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9638	False	NA	22	True	AATAAA	-16	NA	141142127	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207948_141209116_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.14	chr7	+	4712	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	204.111418285162	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTGTGTGGTTTTTGT	9639	False	NA	26	True	AATAAA	-20	NA	141142128	141212922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141144491_141144603_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.17	chr7	+	6746	20	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	10	-6	intron_retention	FALSE	canonical	2	6	junction_10	164.618622454222	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9641	False	NA	22	True	AATAAA	-16	NA	141142130	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200811_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.18	chr7	+	3295	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	10	-1360	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	159.654985157728	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9641	False	NA	36	True	ATTAAA	-20	NA	141142130	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142394_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.19	chr7	+	4551	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	157.784663386528	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTGGTTTTTGTG	9642	False	NA	27	True	AATAAA	-21	NA	141142131	141212923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200752_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.25	chr7	+	4343	2	ISM	ENSMUSG00000002957.12	ENSMUST00000201320.2	1549	5	21	10726	21	-6426	5prime_fragment	FALSE	canonical	3	705	junction_1	0	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAACAAACTCAAAAAC	9652	False	NA	NA	False	NA	NA	NA	141142141	141172343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141142340_141168198
ES.32286.26	chr7	+	3032	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	23	-1362	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	163.84580403538	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGTGGAAATTTTGT	9654	False	NA	34	True	ATTAAA	-18	NA	141142143	141211562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.27	chr7	+	4225	20	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	23	-1310	intron_retention	FALSE	canonical	3	504	junction_7	72.5977037708341	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAATCCAGAAACAGCGC	9654	False	NA	5	True	ATTAAA	-18	NA	141142143	141211614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210268_141210349_141210485_141211204
ES.32286.28	chr7	+	3048	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	58	1540	23	-1540	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCACGGCACCTCCAGG	9654	False	NA	NA	False	GATAAA	-21	NA	141142143	141211384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.3	chr7	+	4655	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	-9	0	-9	0	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGTGGTTTTTGTGG	9587	False	NA	28	True	AATAAA	-22	NA	141142076	141212924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.31	chr7	+	4507	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	23	-12	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	164.16317339769	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAACTGGAACATGTGTG	9654	False	NA	16	True	AATAAA	-10	NA	141142143	141212912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.32	chr7	+	3772	17	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	24	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	179.610994582737	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	9655	False	NA	19	True	AATAAA	-13	NA	141142144	141212915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182244_141199471_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.33	chr7	+	5422	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	25	-2	intron_retention	FALSE	canonical	3	504	junction_7	71.2253290620689	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTGTGTGGTTTTTGT	9656	False	NA	26	True	AATAAA	-20	NA	141142145	141212922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.34	chr7	+	4060	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	25	-1364	intron_retention	FALSE	canonical	3	504	junction_7	71.2253290620689	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACGAAAGTGGAAATTTT	9656	False	NA	32	True	ATTAAA	-16	NA	141142145	141211560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.35	chr7	+	3182	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	25	-1362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	157.71886275719	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGTGGAAATTTTGT	9656	False	NA	34	True	ATTAAA	-18	NA	141142145	141211562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203560_141203601_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.36	chr7	+	4807	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	26	0	intron_retention	FALSE	canonical	3	504	junction_7	70.9796449695263	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGTGGTTTTTGTGG	9657	False	NA	28	True	AATAAA	-22	NA	141142146	141212924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.4	chr7	+	3354	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	-4	1296	-4	-1296	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGCCATGTGCTTTTAGG	9592	False	NA	19	True	ATTAAA	-32	NA	141142081	141211628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.40	chr7	+	4552	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.205550420296	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9659	False	NA	22	True	AATAAA	-16	NA	141142148	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142344_141168210_141168248_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.43	chr7	+	2214	15	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	29	-9262	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	128.503315291149	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCACCCGGCTCTGAAGA	9660	False	NA	NA	False	NA	NA	NA	141142149	141203662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530
ES.32286.44	chr7	+	3139	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	30	-1355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	159.723755291864	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAATTTTGTTCAAATT	9661	False	NA	-40	True	ATTAAA	-25	NA	141142150	141211569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201115_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.45	chr7	+	4542	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	30	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	184.24670437368	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAATGCTAG	9661	False	NA	-7	True	NA	NA	NA	141142150	141212889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210204_141210268_141210349_141210485_141211204
ES.32286.47	chr7	+	3165	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	30	-1362	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_12	219.931910716644	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGTGGAAATTTTGT	9661	False	NA	34	True	ATTAAA	-18	NA	141142150	141211562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199372_141199547_141200384_141200483_141200752_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.49	chr7	+	3214	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	32	-1358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	160.759647919162	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGAAATTTTGTTCAA	9663	False	NA	38	True	ATTAAA	-22	NA	141142152	141211566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210204_141210268_141210349_141210485_141211204
ES.32286.5	chr7	+	4684	20	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	169.374963074073	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9594	False	NA	22	True	AATAAA	-16	NA	141142083	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199946_141201054_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.50	chr7	+	3014	21	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	33	-1362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	189.15179089821	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGTGGAAATTTTGT	9664	False	NA	34	True	ATTAAA	-18	NA	141142153	141211562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200811_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.52	chr7	+	5387	21	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	34	-9	intron_retention	FALSE	canonical	1	16	junction_6	185.956312073562	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	9665	False	NA	19	True	AATAAA	-13	NA	141142154	141212915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189741_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.53	chr7	+	4465	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	34	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	160.276688199018	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACATGTGTGTGGTTTT	9665	False	NA	23	True	AATAAA	-17	NA	141142154	141212919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200811_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.55	chr7	+	5975	21	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	34	-6	intron_retention	FALSE	canonical	3	207	junction_7	120.710562918081	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9665	False	NA	22	True	AATAAA	-16	NA	141142154	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.56	chr7	+	4617	21	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	34	-1360	intron_retention	FALSE	non_canonical	0	0	junction_16	165.090702342682	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9665	False	NA	36	True	ATTAAA	-20	NA	141142154	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207898_141209104_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.57	chr7	+	3173	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	35	-1355	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	157.784663386528	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAATTTTGTTCAAATT	9666	False	NA	-40	True	ATTAAA	-25	NA	141142155	141211569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200752_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.6	chr7	+	5723	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	3	-6	intron_retention	FALSE	canonical	3	504	junction_6	71.2701024273152	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9599	False	NA	22	True	AATAAA	-16	NA	141142088	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.60	chr7	+	4661	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	184.466430402874	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	9668	False	NA	22	True	AATAAA	-16	NA	141142157	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199273_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.61	chr7	+	5137	20	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	40	-1358	intron_retention	FALSE	canonical	3	504	junction_6	73.0540345686602	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGAAATTTTGTTCAA	9671	False	NA	38	True	ATTAAA	-22	NA	141142160	141211566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.62	chr7	+	4794	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	40	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.992434975519	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGAACATGTGTGT	9671	False	NA	17	True	AATAAA	-11	NA	141142160	141212913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141162141_141162395_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189741_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.63	chr7	+	3202	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	40	-1360	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_11	158.243906002247	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9671	False	NA	36	True	ATTAAA	-20	NA	141142160	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200393_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.64	chr7	+	3370	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	40	-1312	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	204.111418285162	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAATCCAGAAACAGC	9671	False	NA	3	True	ATTAAA	-16	NA	141142160	141211612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141144491_141144603_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.66	chr7	+	4446	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	212.164110954997	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	9672	False	NA	19	True	AATAAA	-13	NA	141142161	141212915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194119_141194250_141199363_141199547_141200384_141200483_141200811_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.68	chr7	+	3224	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	-1307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	226.415527139163	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCAGAAACAGCGCCAT	9672	False	NA	8	True	ATTAAA	-21	NA	141142161	141211617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184949_141189741_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201157_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.70	chr7	+	3248	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	46184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	207.638836356873	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAACATAAATTTCTTGAC	9672	False	NA	NA	False	NA	NA	NA	141142161	141259108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199556_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204_141211570_141259084
ES.32286.71	chr7	+	2524	18	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	-1362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	201.913561964496	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAGTGGAAATTTTGT	9672	False	NA	34	True	ATTAAA	-18	NA	141142161	141211562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.72	chr7	+	4368	21	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	163.84580403538	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAACATGTGTGTGGT	9672	False	NA	20	True	AATAAA	-14	NA	141142161	141212916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142340_141168198_141168268_141177385_141177529_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.73	chr7	+	3247	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	41	-1360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	161.119735479542	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9672	False	NA	36	True	ATTAAA	-20	NA	141142161	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207948_141209116_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.76	chr7	+	5189	20	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	42	-2	intron_retention	FALSE	canonical	1	2	junction_3	217.82207026293	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTGTGTGGTTTTTGT	9673	False	NA	26	True	AATAAA	-20	NA	141142162	141212922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141182145_141182276_141184821_141184924_141189741_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.78	chr7	+	6093	3	ISM	ENSMUSG00000002957.12	ENSMUST00000201320.2	1549	5	42	-163	42	163	intron_retention	FALSE	canonical	3	687	junction_2	9	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAGATTCTCATAGCCA	9673	False	NA	NA	False	NA	NA	NA	141142162	141183232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141142340_141168198_141168268_141177385
ES.32286.8	chr7	+	5023	19	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	-7	-1358	intron_retention	FALSE	canonical	0	0	junction_12	196.945721669577	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGAAATTTTGTTCAA	9624	False	NA	38	True	ATTAAA	-22	NA	141142113	141211566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141201202_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.82	chr7	+	4528	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	68	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	161.119735479542	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	9699	False	NA	19	True	AATAAA	-13	NA	141142188	141212915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207899_141209110_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.84	chr7	+	3189	22	NNC	ENSMUSG00000002957.12	novel	590	4	NA	NA	23	-1355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	209.631552384421	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAATTTTGTTCAAATT	9976	False	NA	-40	True	ATTAAA	-25	NA	141142465	141211569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142666_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200752_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.85	chr7	+	4522	22	NIC	ENSMUSG00000002957.12	novel	590	4	NA	NA	87	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	160.998767618275	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	NA	False	NA	22	True	AATAAA	-16	NA	141142529	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141142666_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.86	chr7	+	4080	18	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	36102	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	176.309063332402	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	3964	False	NA	22	True	AATAAA	-16	NA	141178544	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.87	chr7	+	4105	19	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	36230	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	220.389757161553	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGAACATGTGTGTG	4092	False	NA	18	True	AATAAA	-12	NA	141178672	141212914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207898_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211212
ES.32286.89	chr7	+	6856	17	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	39374	-8	intron_retention	FALSE	canonical	3	207	junction_2	133.447086892146	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAACATGTGTGTGGT	7236	False	NA	20	True	AATAAA	-14	NA	141181816	141212916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.9	chr7	+	3283	23	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	0	46184	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	180.840810549861	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAACATAAATTTCTTGAC	9631	False	NA	NA	False	NA	NA	NA	141142120	141259108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204_141211570_141259084
ES.32286.90	chr7	+	3874	18	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	39702	-9	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	201.557448000045	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	7564	False	NA	19	True	AATAAA	-13	NA	141182144	141212915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200811_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.91	chr7	+	5051	15	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	39735	-1364	intron_retention	FALSE	canonical	3	504	junction_3	82.7445355492754	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACGAAAGTGGAAATTTT	7597	False	NA	32	True	ATTAAA	-16	NA	141182177	141211560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141194250_141199363_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.92	chr7	+	9535	14	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	43306	-1360	intron_retention	FALSE	canonical	3	207	junction_1	144.231733330111	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	NA	False	NA	36	True	ATTAAA	-20	NA	141185748	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141200483_141200704_141200937_141201027_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.93	chr7	+	4495	14	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	48925	-1360	intron_retention	FALSE	canonical	3	601	junction_8	68.2985094312646	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	NA	False	NA	36	True	ATTAAA	-20	NA	141191367	141211564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.94	chr7	+	6267	9	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	57230	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	244.440176730422	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAACATGTGTGTGGTTT	2818	False	NA	22	True	AATAAA	-16	NA	141199672	141212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141200937_141201027_141203695_141206020_141206104_141207806_141207894_141209096_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ES.32286.96	chr7	+	2262	1	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	61970	-6250	mono-exon	FALSE	NA	NA	NA	NA	NA	773	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	7558	False	NA	NA	False	ATTAAA	-42	NA	141204412	141206674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141204400_141206700
ES.32287.1	chr7	-	202	1	Intergenic	novelGene_26387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCATCACTGTGGCTC	9953	False	NA	NA	False	NA	NA	NA	141255513	141255311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_141255300_141255500
ES.32288.1	chr7	+	5179	1	Genic_Genomic	ENSMUSG00000066108.8	novel	NA	NA	NA	NA	30979	2143	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTAGAGTTGGCTTCA	NA	False	NA	NA	False	NA	NA	NA	141423785	141428964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_141423800_141429000
ES.32289.1	chr7	-	4406	1	Intergenic	novelGene_26388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCAGAG	9393	False	NA	NA	False	NA	NA	NA	141434609	141430203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_141430200_141434600
ES.3229.1	chr10	-	462	1	Intergenic	novelGene_2529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATCCATGACTGGA	NA	False	NA	NA	False	NA	NA	NA	78250916	78250454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78250500_78250900
ES.3229.2	chr10	-	248	1	Intergenic	novelGene_2530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGATGTAGATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	78250922	78250674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78250700_78250900
ES.32290.1	chr7	+	2356	1	Antisense	novelGene_ENSMUSG00000025139.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCCTAAAGTCTAAAACTA	2316	False	NA	NA	False	NA	NA	NA	141451120	141453476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_141451100_141453500
ES.32291.1	chr7	-	3808	7	FSM	ENSMUSG00000025139.15	ENSMUST00000130439.3	1892	7	-106	-1810	1	4	multi-exon	FALSE	canonical	3	12	junction_6	128.120602905578	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTGAGTATTTTT	2770	False	NA	-1	True	AATAAA	-25	NA	141456151	141435315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
ES.32291.14	chr7	-	2508	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	77	1203	5	603	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGCACTGGAAGCCTC	2774	False	NA	NA	False	ATTAAA	-26	NA	141456147	141436522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ES.32291.15	chr7	-	2246	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	86	1456	14	350	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGTCTTTGCCTCC	2783	False	NA	NA	False	AAGAAA	-12	NA	141456138	141436775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ES.32291.16	chr7	-	1915	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	64	1809	-8	-3	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGCCTGTACCTGACC	2761	False	NA	NA	False	ATTAAA	-14	NA	141456160	141437128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ES.32291.2	chr7	-	3818	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	-27	-3	-27	3	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTTGAGTATTTT	2670	False	NA	-2	True	AATAAA	-24	NA	141456251	141435316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ES.32291.3	chr7	-	4872	6	NIC	ENSMUSG00000025139.15	novel	1892	7	NA	NA	39	2	intron_retention	FALSE	canonical	3	12	junction_5	135.886717526033	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTCTTGAGTATTT	2808	False	NA	-3	True	AATAAA	-23	NA	141456113	141435317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141438319_141443243_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
ES.32291.6	chr7	-	4843	5	NIC	ENSMUSG00000025139.15	novel	3788	6	NA	NA	-22	1	intron_retention	FALSE	canonical	3	286	junction_1	8.33666600026653	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTTCTTGAGTATT	2747	False	NA	-4	True	AATAAA	-22	NA	141456174	141435318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141438319_141443243_141444592_141445720_141445904_141446476_141446627_141456012
ES.32291.7	chr7	-	3891	7	NNC	ENSMUSG00000025139.15	novel	1892	7	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.614319242978	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTTCTTGAGTATT	2782	False	NA	-4	True	AATAAA	-22	NA	141456139	141435318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446102_141446290_141446476_141446627_141456012
ES.32292.1	chr7	+	3866	20	NNC	ENSMUSG00000053046.17	novel	1986	19	NA	NA	-25392	0	intron_retention	FALSE	canonical	1	1	junction_19	2.68162930586463	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGACGCAAGGTTTCCG	1661	False	NA	NA	False	AATAAA	-16	NA	141478095	141557983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141478190_141479168_141479321_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141556211
ES.32292.2	chr7	+	2876	20	NNC	ENSMUSG00000053046.17	novel	1986	19	NA	NA	-25383	-11	intron_retention	FALSE	canonical	1	1	junction_19	2.68162930586463	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAACTTTCTTTTCTTGG	1670	False	NA	NA	False	TTTAAA	-22	NA	141478104	141557002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141478190_141479168_141479321_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141556211
ES.32292.3	chr7	+	2700	21	NNC	ENSMUSG00000053046.17	novel	1986	19	NA	NA	-25368	80	intron_retention	FALSE	canonical	1	1	junction_20	2.71799558498538	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTGTTTTAATTTATT	1685	False	NA	NA	False	NA	NA	NA	141478119	141556746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_141478190_141479168_141479321_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
ES.32292.4	chr7	+	5767	19	ISM	ENSMUSG00000053046.17	ENSMUST00000174499.8	4223	20	-414	-5	-79	5	intron_retention	FALSE	canonical	0	0	junction_1	2.96533469890723	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCAAGGTTTCCGTCCGGG	NA	False	NA	NA	False	AATAAA	-22	NA	141503408	141557989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141554578
ES.32292.5	chr7	+	4057	21	NIC	ENSMUSG00000053046.17	novel	2501	20	NA	NA	57	-1	intron_retention	FALSE	canonical	0	0	junction_1	3.06390273997071	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGACGCAAGGTTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	141503639	141557982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141544084_141544151_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
ES.32292.6	chr7	+	2715	20	NIC	ENSMUSG00000053046.17	novel	2575	20	NA	NA	72	55	intron_retention	FALSE	canonical	0	0	junction_1	2.89903986398324	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGCTGAGACCAGTAT	NA	False	NA	NA	False	GATAAA	-29	NA	141503654	141556721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539170_141539205_141539446_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
ES.32292.7	chr7	+	5933	9	NIC	ENSMUSG00000053046.17	novel	2294	16	NA	NA	1273	0	intron_retention	FALSE	canonical	1	1	junction_8	1.93245310421754	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACATGACGCAAGGT	712	False	NA	NA	False	AATAAA	-11	NA	141540719	141557978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141541653_141541850_141541949_141542022_141542174_141545976_141547057_141547451_141547501_141550625_141552296_141552369_141552460_141552656_141552752_141556211
ES.32292.8	chr7	+	2206	10	ISM	ENSMUSG00000053046.17	ENSMUST00000174405.8	2575	20	38180	-767	2477	-371	3prime_fragment	FALSE	canonical	1	1	junction_9	2.29868454061969	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAAAGCCAG	1916	False	NA	NA	False	NA	NA	NA	141541923	141557433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
ES.32292.9	chr7	+	2275	1	NIC	ENSMUSG00000053046.17	novel	4049	19	NA	NA	-449	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAACTTTCTTTTCTTGGT	NA	False	NA	NA	False	TTTAAA	-23	NA	141554728	141557003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_141554700_141557000
ES.32293.1	chr7	-	1946	1	FSM	ENSMUSG00000092536.3	ENSMUST00000211303.2	2194	1	-1803	2051	219	-2051	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGGAAATCCACTACC	NA	False	NA	NA	False	GATAAA	-41	NA	141503057	141501111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141501100_141503100
ES.32294.1	chr7	-	1472	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	7	-521	6	23	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTCCTTGTGGTTCCTG	NA	False	NA	4	True	NA	NA	NA	141614795	141562248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
ES.32294.2	chr7	-	2180	4	NIC	ENSMUSG00000025147.8	novel	1646	6	NA	NA	0	17	intron_retention	FALSE	canonical	3	149	junction_2	11.0453610171873	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGAGTCTTCCTTGTGG	NA	False	NA	-2	True	NA	NA	NA	141614786	141562254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141564115_141569815_141569910_141570081_141570243_141614721
ES.32294.3	chr7	-	1533	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	-11	-32	-11	17	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGAGTCTTCCTTGTGG	NA	False	NA	-2	True	NA	NA	NA	141614813	141562254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ES.32294.5	chr7	-	1579	5	FSM	ENSMUSG00000025147.8	ENSMUST00000209732.2	977	5	75	-677	-49	-1	multi-exon	FALSE	canonical	1	2	junction_4	68.6676779860802	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGTCCTCTCAGCCT	NA	False	NA	-35	True	AATAAA	-17	NA	141579737	141562287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141579566
ES.32294.6	chr7	-	1683	6	NIC	ENSMUSG00000025147.8	novel	1490	5	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	78.3106633862848	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCTGTGTCCTCTCAGC	NA	False	NA	-37	True	AATAAA	-15	NA	141614795	141562289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141578010_141578214_141614721
ES.32294.8	chr7	-	1373	4	NIC	ENSMUSG00000025147.8	novel	1490	5	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.4356545391163	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTGTGTCCTCTCA	NA	False	NA	-39	True	AATAAA	-13	NA	141614784	141562291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141563316_141563989_141564115_141570081_141570243_141614721
ES.32295.1	chr7	-	3160	6	Antisense	novelGene_ENSMUSG00000046248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGTCTGTTTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	141764676	141748482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_141749485_141749652_141749870_141754541_141755827_141756018_141756076_141756183_141756722_141764615
ES.32296.1	chr7	+	2293	2	Genic_Genomic	ENSMUSG00000109581.2	novel	1246	1	NA	NA	1224	5866	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGCCTGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	141778481	141784369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_141778611_141782205
ES.32297.1	chr7	-	2111	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	18	-2	18	2	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGCTCTGTACTGTTT	8702	False	NA	0	True	AATAAA	-25	NA	141941757	141929645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.10	chr7	-	1904	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	706.534146379352	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8895	False	NA	-8	True	AATAAA	-17	NA	141941564	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931185_141934500_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.13	chr7	-	1940	9	NNC	ENSMUSG00000007891.17	novel	1922	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	696.59088378689	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8851	False	NA	-8	True	AATAAA	-17	NA	141941608	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931083_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.14	chr7	-	1183	5	NNC	ENSMUSG00000007891.17	novel	1922	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	930.890266089403	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8853	False	NA	-8	True	AATAAA	-17	NA	141941606	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930822_141939285_141939356_141941473
ES.32297.15	chr7	-	1688	10	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.687666335927	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8843	False	NA	-8	True	AATAAA	-17	NA	141941616	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141929938_141930211_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.16	chr7	-	2135	8	NIC	ENSMUSG00000007891.17	novel	1922	9	NA	NA	-33	0	intron_retention	FALSE	canonical	3	1941	junction_3	109.086934064871	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8832	False	NA	-8	True	AATAAA	-17	NA	141941627	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141930476_141930569_141930669_141930762_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.18	chr7	-	1654	8	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	739.821544946717	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTCTATTGGTGTGCTC	8863	False	NA	-10	True	AATAAA	-15	NA	141941596	141929655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934581_141937172_141937279_141939195_141939356_141941473
ES.32297.19	chr7	-	5223	8	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-20	-3	intron_retention	FALSE	canonical	1	11	junction_5	746.297090265516	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCTCTATTGGTGTGCT	8845	False	NA	-11	True	AATAAA	-14	NA	141941614	141929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141934730_141936328_141936448_141937198_141937279_141939195_141939356_141941473
ES.32297.2	chr7	-	1802	10	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.687666335927	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	8821	False	NA	-2	True	AATAAA	-23	NA	141941638	141929647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141929841_141930028_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.20	chr7	-	1921	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	693.507739232231	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCTCTATTGGTGTGCT	8874	False	NA	-11	True	AATAAA	-14	NA	141941585	141929656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939349_141941473
ES.32297.23	chr7	-	1846	10	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	666.687666335927	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTTGATCTCTATTGG	8896	False	NA	-17	True	AATAAA	-8	NA	141941563	141929662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141929937_141929990_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.3	chr7	-	5286	8	NIC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-30	0	intron_retention	FALSE	canonical	3	1972	junction_1	96.4830533919648	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	8835	False	NA	-2	True	AATAAA	-23	NA	141941624	141929647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.4	chr7	-	2084	8	NIC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-44	0	intron_retention	FALSE	canonical	3	1941	junction_3	103.573103434734	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	8821	False	NA	-2	True	AATAAA	-23	NA	141941638	141929647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.5	chr7	-	1934	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	705.961124549362	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTGTGCTCTGTACTG	8863	False	NA	-3	True	AATAAA	-22	NA	141941596	141929648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930582_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.6	chr7	-	5421	6	NIC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	18	1	intron_retention	FALSE	canonical	3	1999	junction_4	83.8298276271638	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTATTGGTGTGCTCTGT	8883	False	NA	-7	True	AATAAA	-18	NA	141941576	141929652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141930908_141931069_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.7	chr7	-	5356	7	NIC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1999	junction_5	81.6510189090674	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8853	False	NA	-8	True	AATAAA	-17	NA	141941606	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_141930669_141930762_141930908_141931069_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32297.8	chr7	-	1925	9	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	693.507739232231	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	9019	False	NA	-8	True	AATAAA	-17	NA	141941440	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941334
ES.32297.9	chr7	-	2213	7	NNC	ENSMUSG00000007891.17	novel	1922	9	NA	NA	-22	0	intron_retention	FALSE	canonical	2	122	junction_1	736.467846473211	1029	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8843	False	NA	-8	True	AATAAA	-17	NA	141941616	141929653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_141930669_141930767_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ES.32298.1	chr7	+	1423	11	NNC	ENSMUSG00000018819.11	novel	1395	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.4117444218464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATTTGGATCTCCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	142014573	142048335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142014704_142038215_142038363_142040083_142040249_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ES.32298.2	chr7	+	1335	10	NIC	ENSMUSG00000018819.11	novel	1395	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	1.1653431646335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGATCTCCTGTGCTCA	NA	False	NA	NA	False	AATAAA	-23	NA	142014600	142048340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044295_142044403_142047972
ES.32298.3	chr7	+	1392	11	FSM	ENSMUSG00000018819.11	ENSMUST00000018963.11	1695	11	34	269	16	-1	multi-exon	FALSE	canonical	1	1	junction_5	3.11287648325468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCATTTGGATCTCCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	142014616	142048335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ES.32299.1	chr7	+	155	1	Intergenic	novelGene_26389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	142072199	142072354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_142072200_142072400
ES.323.1	chr1	+	175	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGAAAATTG	NA	False	NA	NA	False	NA	NA	NA	37943807	37943982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37943800_37944000
ES.3230.1	chr10	+	653	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	-48	-2	-48	2	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTCCTTAGTTTTAA	NA	False	NA	25	True	AATATA	-20	NA	78261454	78263458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78261692_78262760_78262863_78263144
ES.3230.2	chr10	+	584	3	NNC	ENSMUSG00000005054.8	novel	603	3	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1933	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAATTGTGTCCTTAG	NA	False	NA	19	True	AATATA	-14	NA	78261511	78263452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78261692_78262760_78262863_78263150
ES.3230.3	chr10	+	1595	2	NIC	ENSMUSG00000005054.8	novel	603	3	NA	NA	74	-3	intron_retention	FALSE	canonical	3	3631	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAATTGTGTCCTTAGT	NA	False	NA	20	True	AATATA	-15	NA	78261576	78263453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78262863_78263144
ES.32300.1	chr7	+	619	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	72	1	72	-1	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGACACTTTGCCT	NA	False	NA	1	True	AATAAA	-19	NA	142086820	142094483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ES.32300.11	chr7	+	558	5	FSM	ENSMUSG00000037772.14	ENSMUST00000210803.2	590	5	25	7	24	3	multi-exon	FALSE	canonical	3	4	junction_1	637.011136087902	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	False	NA	-5	True	AATAAA	-13	NA	142086922	142094477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142086979_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ES.32300.2	chr7	+	417	4	NIC	ENSMUSG00000037772.14	novel	692	5	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	664.614675332005	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGGTGGACACTTT	NA	False	NA	-3	True	AATAAA	-15	NA	142086895	142094479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142086932_142089806_142089890_142091003_142091078_142094255
ES.32300.3	chr7	+	500	5	NNC	ENSMUSG00000037772.14	novel	692	5	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	598.550123214422	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGGTGGACACTTT	NA	False	NA	-3	True	AATAAA	-15	NA	142086895	142094479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094295
ES.32300.4	chr7	+	3744	1	FSM	ENSMUSG00000037772.14	ENSMUST00000209576.2	3715	1	-3	-26	-2	26	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGTTCTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	142086895	142090639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142086900_142090600
ES.32300.5	chr7	+	506	4	ISM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	152	3212	2	246	5prime_fragment	FALSE	canonical	3	973	junction_1	264.978405828769	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATGCCTTAGTTACA	NA	False	NA	NA	False	AGTAAA	-23	NA	142086900	142091272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003
ES.32300.6	chr7	+	950	5	NNC	ENSMUSG00000037772.14	novel	590	5	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	635.297322125633	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	False	NA	-5	True	AATAAA	-13	NA	142086906	142094477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142087355_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ES.32300.7	chr7	+	6458	2	FSM	ENSMUSG00000037772.14	ENSMUST00000141098.2	693	2	-2933	-2832	9	5	multi-exon	FALSE	canonical	3	1509	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGGTGGACACTTT	NA	False	NA	-3	True	AATAAA	-15	NA	142086907	142094479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142089890_142091003
ES.32300.8	chr7	+	500	5	NNC	ENSMUSG00000037772.14	novel	692	5	NA	NA	9	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	625.443992296672	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGGTGGACACTTT	NA	False	NA	-3	True	AATAAA	-15	NA	142086907	142094479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094283
ES.32300.9	chr7	+	5518	3	FSM	ENSMUSG00000037772.14	ENSMUST00000145002.2	712	3	-1350	-3456	10	-2	multi-exon	FALSE	canonical	3	1509	junction_2	24.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGTGGACACTTTGCC	NA	False	NA	0	True	AATAAA	-18	NA	142086908	142094482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142088865_142089806_142089890_142091003
ES.32301.1	chr7	-	1117	5	FSM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1166	3	-18	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTCTCGTGGACTTCAA	NA	False	NA	NA	False	AATAAA	-14	NA	142130714	142129268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142129852_142129939_142130068_142130145_142130268_142130349_142130485_142130565
ES.32302.1	chr7	-	178	1	Intergenic	novelGene_26390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	2464	False	NA	NA	False	NA	NA	NA	142227511	142227333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_142227300_142227500
ES.32303.1	chr7	+	194	1	Intergenic	novelGene_26391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCCAATATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	142264023	142264217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_142264000_142264200
ES.32304.1	chr7	-	3759	1	Intergenic	novelGene_26392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	9991	False	NA	NA	False	NA	NA	NA	142332036	142328277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_142328300_142332000
ES.32305.1	chr7	-	1999	13	NNC	ENSMUSG00000000214.12	novel	1829	13	NA	NA	-30023	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGAGTGTTCCTGGC	NA	False	NA	NA	False	AATAAA	-12	NA	142514888	142446517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_142446928_142447744_142447879_142448129_142448226_142448377_142448435_142448825_142448896_142449053_142449190_142449259_142449406_142449765_142449817_142450147_142450216_142450330_142450420_142450664_142450840_142451702_142451928_142514546
ES.32306.1	chr7	-	1658	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	-44	-9	-44	9	multi-exon	FALSE	canonical	3	20	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTTGTACCTTCTCAA	NA	False	NA	0	True	TATAAA	-24	NA	142523045	142520556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142521077_142521636_142522437_142522707
ES.32306.2	chr7	-	2418	1	FSM	ENSMUSG00000009248.7	ENSMUST00000121862.3	814	1	-528	-1076	19	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGCAGTGCCTTGTAC	NA	False	NA	-8	True	TATAAA	-16	NA	142522982	142520564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142520600_142523000
ES.32307.1	chr7	+	1577	9	FSM	ENSMUSG00000000244.18	ENSMUST00000009396.13	1582	9	1	4	1	-1	multi-exon	FALSE	canonical	1	4	junction_1	3.07205143186113	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTGGGTAGAATCCTT	3170	False	NA	NA	False	NA	NA	NA	142558783	142573219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
ES.32307.2	chr7	+	1472	8	NIC	ENSMUSG00000000244.18	novel	1582	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	3.39867921524866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGTAGAATCCTTT	3192	False	NA	NA	False	NA	NA	NA	142558805	142573220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142571315_142571411_142572427
ES.32307.3	chr7	+	1365	8	NNC	ENSMUSG00000000244.18	novel	478	2	NA	NA	630	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.2570469787861	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGTAGAATCCTTT	4681	False	NA	NA	False	NA	NA	NA	142560294	142573220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142560326_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
ES.32307.4	chr7	+	1361	8	NNC	ENSMUSG00000000244.18	novel	478	2	NA	NA	630	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.20988072251728	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGTAGAATCCTTT	4681	False	NA	NA	False	NA	NA	NA	142560294	142573220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142560326_142560459_142560540_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142571315_142571411_142572427
ES.32307.5	chr7	+	1368	6	NNC	ENSMUSG00000000244.18	novel	478	2	NA	NA	1817	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.96386945839634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGGTAGAATCCTTT	5868	False	NA	NA	False	NA	NA	NA	142561481	142573220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142561698_142564770_142564846_142568695_142568798_142569317_142569405_142571315_142571411_142572427
ES.32307.6	chr7	+	1342	6	NNC	ENSMUSG00000000244.18	novel	478	2	NA	NA	1848	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.72021504754765	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAACTTGGGTAGAATC	5899	False	NA	NA	False	NA	NA	NA	142561512	142573216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142561698_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
ES.32308.1	chr7	-	3848	1	Intergenic	novelGene_26393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCATCATTGAGGGATT	NA	False	NA	NA	False	NA	NA	NA	142539597	142535749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_142535700_142539600
ES.32308.2	chr7	-	5992	1	Genic_Genomic	ENSMUSG00000052281.15	novel	NA	NA	NA	NA	1136	5318	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTTTGCCTGCATGT	NA	False	NA	NA	False	NA	NA	NA	142543379	142537387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_142537400_142543400
ES.32308.3	chr7	-	1890	5	NNC	ENSMUSG00000052281.15	novel	975	5	NA	NA	-123	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0.866025403784439	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTGCTGTGACTCAAT	NA	False	NA	NA	False	NA	NA	NA	142561893	142542706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_142542806_142543093_142543282_142543602_142544678_142547210_142547345_142561499
ES.32309.1	chr7	-	2287	1	Intergenic	novelGene_26394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTTTTTTTTCATAAT	NA	False	NA	NA	False	AGTAAA	-37	NA	142585414	142583127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_142583100_142585400
ES.3231.1	chr10	+	823	1	Intergenic	novelGene_2531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCACTAGACGCTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	78266973	78267796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_78267000_78267800
ES.32310.1	chr7	+	1530	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	3	0	3	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606478	142621671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.10	chr7	+	1456	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2214.746514265	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGACTGCCAGACCTC	NA	False	NA	35	True	AATAAA	-23	NA	142606523	142621664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606775_142616222_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.12	chr7	+	1404	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-7	-6	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	2401.74718810194	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606523	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.13	chr7	+	4396	9	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	160	junction_8	2044.16321510783	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142606523	142624823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623251_142623491
ES.32310.14	chr7	+	1087	9	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-7	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2729.13580357867	2058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACACTTAGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	142606523	142621201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142614541_142614614_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.15	chr7	+	1345	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2214.746514265	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGGCATGCTAA	NA	False	NA	18	True	AATAAA	-6	NA	142606524	142621647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606717_142616257_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.16	chr7	+	1786	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	5787	junction_4	294.940672000319	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606524	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620500_142620883_142620971_142621048
ES.32310.17	chr7	+	4368	6	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	5787	junction_3	238.457543390852	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATCAGGCATGCTA	NA	False	NA	17	True	AATAAA	-5	NA	142606524	142621646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142619044_142619679_142619755_142619984_142620500_142620883_142620971_142621048
ES.32310.18	chr7	+	5023	6	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	5787	junction_4	311.509229397782	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142606524	142624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620500_142620883
ES.32310.19	chr7	+	4528	9	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	124	junction_8	2055.94905092514	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606524	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623558_142623672
ES.32310.2	chr7	+	1062	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	20	451	20	-122	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGAGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	142606495	142621220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.20	chr7	+	4558	9	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	158	junction_8	2044.8179472755	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606524	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623588_142623672
ES.32310.21	chr7	+	4285	10	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	124	junction_9	2565.76009963693	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	False	NA	20	True	AATAAA	-19	NA	142606524	142624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623251_142623491_142623558_142623672
ES.32310.22	chr7	+	1707	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	5916	junction_3	255.9279955161	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606525	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.23	chr7	+	2342	6	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	6204	junction_4	176.778958023855	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGACTGCCAGACCTC	NA	False	NA	35	True	AATAAA	-23	NA	142606525	142621664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.24	chr7	+	4043	10	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	0	multi-exon	FALSE	canonical	2	6	junction_9	2590.7971317295	2220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142606525	142624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623588_142623672_142624030_142624537
ES.32310.26	chr7	+	2113	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	5787	junction_3	294.804266515184	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606525	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.27	chr7	+	3300	14	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_1	3121.06865706767	2220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGAATTGTGTGGCTTT	NA	False	NA	14	True	AATAAA	-13	NA	142606525	142624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142615396_142615526_142615597_142615717_142615971_142616115_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142621745_142621911_142622019_142623491_142623588_142623672
ES.32310.3	chr7	+	2452	6	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	20	-5	intron_retention	FALSE	canonical	3	5787	junction_3	287.226461176543	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGACTGCCAGACCTCTT	NA	False	NA	37	True	AATAAA	-25	NA	142606495	142621666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619755_142619984_142620500_142620883_142620971_142621048
ES.32310.30	chr7	+	5182	8	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	158	junction_7	2845.45750419212	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606525	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142620090_142620397_142620500_142620883_142620971_142621048_142623251_142623491_142623588_142623672
ES.32310.32	chr7	+	5021	5	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	5787	junction_2	238.536553802557	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGACTGCCAGACCTC	NA	False	NA	35	True	AATAAA	-23	NA	142606525	142621664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142619755_142619984_142620500_142620883_142620971_142621048
ES.32310.33	chr7	+	1137	9	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2096.55509109587	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606525	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142621291_142621630
ES.32310.34	chr7	+	1451	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2234.80068964751	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGGCATGCTAA	NA	False	NA	18	True	AATAAA	-6	NA	142606525	142621647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616229_142616345_142618945_142619036_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.35	chr7	+	1300	9	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2096.55509109587	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAGGCATGCTAA	NA	False	NA	18	True	AATAAA	-6	NA	142606525	142621647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142621315_142621473
ES.32310.36	chr7	+	4316	10	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	158	junction_9	2558.71899855773	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606525	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142623251_142623491_142623588_142623672
ES.32310.37	chr7	+	4078	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	5787	junction_3	289.226218651691	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606525	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.38	chr7	+	4567	7	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	0	multi-exon	FALSE	canonical	3	19	junction_3	2401.74718810194	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606525	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.4	chr7	+	4646	8	FSM	ENSMUSG00000045752.14_ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	46	-3159	-9	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606521	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.40	chr7	+	7859	4	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	5916	junction_2	178.532910131438	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142606525	142624830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142619044_142619679_142620500_142620883
ES.32310.41	chr7	+	1473	9	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-4	60226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2096.55509109587	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGCTACAGATGTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	142606526	142681897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048_142621645_142681879
ES.32310.42	chr7	+	4764	8	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-4	-2	multi-exon	FALSE	canonical	0	0	junction_5	2192.91402439023	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	False	NA	20	True	AATAAA	-19	NA	142606526	142624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620215_142620397_142620500_142620883_142620971_142621048
ES.32310.43	chr7	+	2650	5	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	6204	junction_3	166.322540565012	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606526	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142620500_142620883_142620971_142621048
ES.32310.45	chr7	+	1222	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2214.746514265	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606526	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606560_142616239_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.46	chr7	+	1377	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	51	105	-4	-87	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTTCAATGCACTTATT	NA	False	NA	-63	True	NA	NA	NA	142606526	142621566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.49	chr7	+	2011	6	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	5916	junction_3	244.551344302173	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGGGACTGCCAGACCT	NA	False	NA	34	True	AATAAA	-22	NA	142606527	142621663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142620500_142620883_142620971_142621048
ES.32310.50	chr7	+	1487	8	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-215	-7	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	2212.32104545504	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGACTGCCAGACCTC	NA	False	NA	35	True	AATAAA	-23	NA	142606794	142621664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142607084_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32310.51	chr7	+	5018	2	ISM	ENSMUSG00000045752.14_ENSMUSG00000037706.18	ENSMUST00000132303.2	943	3	-511	-3486	-511	-2	intron_retention	FALSE	canonical	3	6204	junction_1	0	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	False	NA	20	True	AATAAA	-19	NA	142619426	142624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_142620500_142620883
ES.32310.52	chr7	+	3030	4	Fusion	ENSMUSG00000037706.18_ENSMUSG00000045752.14	novel	981	2	NA	NA	1405	-1	intron_retention	FALSE	canonical	0	0	junction_2	73.1087470066947	2198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAATTGTGTGGCTTTT	NA	False	NA	15	True	AATAAA	-14	NA	142621342	142624823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142621745_142621911_142622019_142622217_142623588_142623672
ES.32310.53	chr7	+	1364	3	NNC	ENSMUSG00000045752.14	novel	1519	3	NA	NA	-129	0	intron_retention	FALSE	canonical	1	1	junction_1	61.5	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142622856	142624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142623003_142623491_142623558_142623672
ES.32310.54	chr7	+	1570	3	NNC	ENSMUSG00000045752.14	novel	1364	3	NA	NA	-122	0	intron_retention	FALSE	canonical	1	1	junction_1	79.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142622863	142624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142623003_142623152_142623251_142623491
ES.32310.55	chr7	+	830	4	FSM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	69	-4	13	-2	multi-exon	FALSE	canonical	3	12	junction_3	69.3012746395524	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	False	NA	20	True	AATAAA	-19	NA	142623173	142624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142623251_142623491_142623588_142623672_142624030_142624528
ES.32310.56	chr7	+	1409	3	NNC	ENSMUSG00000045752.14	novel	1519	3	NA	NA	-35	-2	intron_retention	FALSE	canonical	0	0	junction_1	79	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGAATTGTGTGGCTTT	NA	False	NA	14	True	AATAAA	-13	NA	142623245	142624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142623431_142623513_142623588_142623672
ES.32310.6	chr7	+	5501	6	Fusion	ENSMUSG00000045752.14_ENSMUSG00000037706.18	novel	1533	8	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_3	2564.81788827199	2220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142606522	142624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_+_142606804_142616229_142616345_142618945_142620086_142620397_142620500_142620883_142620971_142621048
ES.32310.7	chr7	+	5258	4	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	6204	junction_2	80.2122185206219	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGCCAGACCTCTTCC	NA	False	NA	39	True	AATAAA	-27	NA	142606522	142621668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_142606804_142616229_142620500_142620883_142620971_142621048
ES.32310.8	chr7	+	1516	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2192.91402439023	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606522	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620361_142620500_142620883_142620971_142621048
ES.32310.9	chr7	+	1471	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2214.746514265	2073	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	False	NA	36	True	AATAAA	-24	NA	142606523	142621665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_142606804_142616237_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ES.32311.1	chr7	-	4788	2	ISM	ENSMUSG00000059277.13	ENSMUST00000131129.2	1682	5	11946	306	11686	-306	intron_retention	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTCTATTAGTTCT	NA	False	NA	-1	True	NA	NA	NA	142595468	142587326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_142587664_142591017
ES.32311.2	chr7	-	977	4	FSM	ENSMUSG00000059277.13	ENSMUST00000155952.8	2219	4	273	969	4	-306	multi-exon	FALSE	canonical	2	6	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCCTCTATTAGTTCT	NA	False	NA	-1	True	NA	NA	NA	142607150	142587326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142587664_142591017_142591119_142598231_142598394_142606773
ES.32312.1	chr7	-	2046	1	Genic_Genomic	ENSMUSG00000009246.15	novel	NA	NA	NA	NA	4486	1647	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAAAAAACTCAAAA	NA	False	NA	NA	False	NA	NA	NA	142623288	142621242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_142621200_142623300
ES.32313.1	chr7	-	8355	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	61240	23497	61240	-23497	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCCAGGATC	NA	False	NA	NA	False	NA	NA	NA	142789046	142780691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142780700_142789000
ES.32313.2	chr7	-	3532	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	65900	23660	65900	-23660	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAAAACCTGAAATGGA	NA	False	NA	NA	False	NA	NA	NA	142784386	142780854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142780900_142784400
ES.32314.1	chr7	-	2657	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	53254	37181	53254	-37181	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAACACTATAAGGAC	NA	False	NA	NA	False	AAGAAA	-7	NA	142797032	142794375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142794400_142797000
ES.32315.1	chr7	-	10677	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	35164	47251	35164	-47251	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCAGGGCTTTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	142815122	142804445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142804400_142815100
ES.32315.2	chr7	-	1994	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	40388	50710	40388	-50710	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCATTTCCTTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	142809898	142807904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142807900_142809900
ES.32315.3	chr7	-	5991	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	33235	53866	33235	-53866	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAGAGTCTCTAATAC	NA	False	NA	NA	False	NA	NA	NA	142817051	142811060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142811100_142817100
ES.32315.4	chr7	-	2747	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	36330	54015	36330	-54015	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATTGTATTGTCCATT	NA	False	NA	NA	False	AATAAA	-33	NA	142813956	142811209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142811200_142814000
ES.32316.1	chr7	+	7708	1	FSM	ENSMUSG00002076721.1	ENSMUST00020182674.1	195	1	-6967	-546	-6967	546	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACCTTGACTGC	NA	False	NA	NA	False	NA	NA	NA	142819822	142827530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_142819800_142827500
ES.32317.1	chr7	-	3823	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	17913	71356	17913	-71356	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGCATTTTACTGT	NA	False	NA	NA	False	TATAAA	-14	NA	142832373	142828550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142828600_142832400
ES.32317.2	chr7	-	5515	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	13987	73590	13987	-73590	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATATCCAAGAAACAGTG	NA	False	NA	96	True	NA	NA	NA	142836299	142830784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142830800_142836300
ES.32317.3	chr7	-	8763	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	6625	77704	6625	-77704	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCCTGGCATTAACAG	NA	False	NA	NA	False	NA	NA	NA	142843661	142834898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_142834900_142843700
ES.32318.1	chr7	-	1843	4	FSM	ENSMUSG00000037664.14	ENSMUST00000037287.8	1901	4	50	8	-4	-8	multi-exon	FALSE	canonical	2	6	junction_2	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAATCATACTTGTAG	NA	False	NA	NA	False	AATAAA	-8	NA	143014737	143012086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143012759_143012848_143012988_143013531_143014416_143014589
ES.32319.1	chr7	-	736	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	16	5	16	-5	multi-exon	FALSE	canonical	3	98	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACTGTGTGGTCTGTGT	NA	False	NA	-3	True	AATAAA	-22	NA	143056262	143055286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143055554_143055793
ES.3232.1	chr10	+	2367	2	NNC	ENSMUSG00000112652.2	novel	4560	3	NA	NA	9375	1205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTGAGGCAAACTTCC	NA	False	NA	NA	False	NA	NA	NA	78273479	78275886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78274942_78274981
ES.32320.1	chr7	-	226	1	Intergenic	novelGene_26395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTTTATATAAAAGGAA	9304	False	NA	NA	False	NA	NA	NA	143059647	143059421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143059400_143059600
ES.32321.1	chr7	-	153	1	Intergenic	novelGene_26396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGGAAAAAA	7872	False	NA	NA	False	NA	NA	NA	143061079	143060926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143060900_143061100
ES.32322.1	chr7	+	2947	1	Antisense	novelGene_ENSMUSG00000059119.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGACTATGGCTATGGGA	192	False	NA	NA	False	NA	NA	NA	143066926	143069873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_143066900_143069900
ES.32323.1	chr7	+	2460	1	Antisense	novelGene_ENSMUSG00000059119.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGGACTGGTGACTCA	8735	False	NA	NA	False	NA	NA	NA	143078252	143080712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_143078300_143080700
ES.32324.1	chr7	+	160	1	Intergenic	novelGene_26397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	143092836	143092996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_143092800_143093000
ES.32325.1	chr7	-	2441	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	-179	-3	-179	-1	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143103022	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.11	chr7	-	2286	15	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	316.45553738694	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATTGGTTTTTTTGTTG	NA	False	NA	-4	True	ATTAAA	-17	NA	143102834	143067318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.12	chr7	-	7838	13	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_7	296.0528762832	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102808	143067319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.13	chr7	-	6465	15	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_8	295.88274187383	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102834	143067319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086085_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.14	chr7	-	4381	14	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	4863	-5	-2195	0	3prime_fragment	FALSE	canonical	3	471	junction_1	171.154969745664	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	2174	False	NA	-5	True	ATTAAA	-16	NA	143097702	143067319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484
ES.32325.15	chr7	-	4809	17	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	367.056742675775	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102333	143067319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143099645_143099757_143099865
ES.32325.16	chr7	-	2208	13	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	1529	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	403.017576126236	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGATTGGTTTTTTTG	5898	False	NA	-7	True	ATTAAA	-14	NA	143093978	143067321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078053_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093920
ES.32325.19	chr7	-	4116	14	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	29	0	intron_retention	FALSE	canonical	3	471	junction_1	170.090230144275	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102800	143067324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.2	chr7	-	2283	15	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	1	10	junction_14	307.37921138528	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143102859	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143102778
ES.32325.20	chr7	-	2271	15	NIC	ENSMUSG00000059119.10	novel	2281	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_14	296.821538150795	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102565	143067324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102483
ES.32325.23	chr7	-	2405	18	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	438.263923265407	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102840	143067324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088017_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143099695_143099757_143099865_143099918_143102778
ES.32325.24	chr7	-	2411	16	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-104	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_15	300.066703695473	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102669	143067324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102483
ES.32325.26	chr7	-	2239	16	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	300.671884655387	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102825	143067324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086085_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.28	chr7	-	2423	17	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	358.891778386953	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102834	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143094422_143094569_143095484_143095516_143102778
ES.32325.29	chr7	-	2127	15	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	379.680269625454	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102800	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074116_143074178_143075137_143075168_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.3	chr7	-	6498	15	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	502	junction_1	161.043028855201	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143102831	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.30	chr7	-	2242	16	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.397168642457	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102810	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068364_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.34	chr7	-	2242	16	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	301.801303288549	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102784	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102763
ES.32325.36	chr7	-	1975	13	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	8	-4	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	334.902929551568	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102821	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.38	chr7	-	2240	14	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	314.943500145699	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102834	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.39	chr7	-	2318	17	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	367.056742675775	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102800	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143096744_143096820_143102778
ES.32325.4	chr7	-	2454	17	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-87	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	365.06741136912	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143102652	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143099865_143099918_143102483
ES.32325.41	chr7	-	7974	14	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	8	-4	intron_retention	FALSE	canonical	3	871	junction_13	93.6154162189442	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102821	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.42	chr7	-	2304	16	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	363.787263841566	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102837	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091000_143091061_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.43	chr7	-	4598	14	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	4	-4	intron_retention	FALSE	canonical	3	502	junction_2	201.601223345589	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102837	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078454_143080902_143081049_143083154_143083295_143086045_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.44	chr7	-	2628	14	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	21	-4	intron_retention	FALSE	canonical	3	471	junction_1	173.850068029455	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102808	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.45	chr7	-	2279	16	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	9	-4	combination_of_known_junctions	FALSE	canonical	2	10	junction_15	304.124492053282	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102531	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102473
ES.32325.46	chr7	-	2289	15	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	382.722550969247	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102852	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143077877_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093920_143093984_143095484_143095516_143102778
ES.32325.49	chr7	-	5163	14	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	502	junction_2	205.678038743328	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102858	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.51	chr7	-	2367	16	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	371.896162329696	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102852	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143079541_143079650_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.53	chr7	-	2083	14	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	310.1668571752	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102808	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.54	chr7	-	2320	17	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	405.650172562517	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102823	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143072856_143072907_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093920_143093984_143095484_143095516_143102778
ES.32325.56	chr7	-	2335	15	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	-38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.748050563522	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102881	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068410_143074108_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.57	chr7	-	2334	17	NNC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	362.558766788227	685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	False	NA	-14	True	ATTAAA	-7	NA	143102837	143067328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143083397_143083452_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.60	chr7	-	2620	15	ISM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	8	3869	8	-2884	5prime_fragment	FALSE	canonical	3	502	junction_1	161.043028855201	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTATGGCTTATGTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	143102821	143071184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.61	chr7	-	4339	11	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	4	1345	intron_retention	FALSE	canonical	3	871	junction_10	98.7260857119333	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTACTACTGGGCACAA	NA	False	NA	NA	False	NA	NA	NA	143102837	143076574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.62	chr7	-	2818	11	NIC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	21	1345	intron_retention	FALSE	canonical	3	871	junction_10	98.734036684418	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTACTACTGGGCACAA	NA	False	NA	NA	False	NA	NA	NA	143102808	143076574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32325.7	chr7	-	2278	16	NIC	ENSMUSG00000059119.10	novel	2285	16	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	369.818453959357	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143102807	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143099865_143099918_143102778
ES.32325.8	chr7	-	2317	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	-33	1	-19	-1	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGGTTTTTTTGTTGTT	NA	False	NA	-2	True	ATTAAA	-19	NA	143102862	143067316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ES.32326.1	chr7	-	170	1	Intergenic	novelGene_26398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATATGTTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	143104578	143104408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143104400_143104600
ES.32327.1	chr7	+	5133	1	Intergenic	novelGene_26399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGTATCTGCATGGAC	NA	False	NA	NA	False	NA	NA	NA	143132512	143137645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_143132500_143137600
ES.32328.1	chr7	-	8313	1	Genic_Genomic	ENSMUSG00000010755.18	novel	NA	NA	NA	NA	4184	4711	mono-exon	FALSE	NA	NA	NA	NA	NA	1050	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGAGTTGGTTTGAGAC	NA	False	NA	NA	False	AAGAAA	-3	NA	143114568	143106255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_143106300_143114600
ES.32328.10	chr7	-	3121	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-4	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	434.825701282557	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCCTGTCCACCTGC	NA	False	NA	NA	False	GATAAA	-22	NA	143153797	143111031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122675_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.100	chr7	-	2841	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	491.487945687525	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153809	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.101	chr7	-	3747	16	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	10238	-1	intron_retention	FALSE	canonical	3	1254	junction_12	82.0013550023548	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143140251	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151
ES.32328.102	chr7	-	5620	12	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-708	-1	intron_retention	FALSE	canonical	3	1332	junction_2	77.3636897767148	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143129054	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220
ES.32328.104	chr7	-	2821	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	536.984167568544	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153808	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143146148_143146398_143153718
ES.32328.106	chr7	-	2606	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	487.651111764644	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153791	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150278_143150349_143150797_143150875_143153718
ES.32328.108	chr7	-	4194	18	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	9059	-1	intron_retention	FALSE	canonical	2	33	junction_13	435.768120301704	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143141430	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143129929_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841
ES.32328.11	chr7	-	2982	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	-70	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	411.870860066479	1055	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGTGTTCCTGTCCA	NA	False	NA	NA	False	GATAAA	-17	NA	143153791	143111036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.110	chr7	-	3935	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	627.455795293389	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153819	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143128584_143129929_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150797_143150876_143153718
ES.32328.111	chr7	-	4828	20	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	-1	intron_retention	FALSE	canonical	3	20	junction_11	439.10285016086	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153791	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.112	chr7	-	7302	17	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	19	-1	intron_retention	FALSE	canonical	3	1234	junction_16	94.8479045630424	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153749	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123887_143124278_143124408_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.113	chr7	-	2690	25	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	623.234701421187	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153791	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130169_143130286_143130400_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150797_143150876_143153718
ES.32328.115	chr7	-	4733	19	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	-1	intron_retention	FALSE	canonical	1	12	junction_11	335.624772110643	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153791	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124428_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.116	chr7	-	3555	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_15	486.816204053363	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153801	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143129343_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.117	chr7	-	4705	19	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_15	335.637204930165	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153806	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130412_143138384_143138535_143139435_143139535_143140151_143142321_143153718
ES.32328.118	chr7	-	4401	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	8	-1	intron_retention	FALSE	canonical	3	290	junction_19	349.35473018123	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153809	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.119	chr7	-	4136	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1234	junction_19	95.4820979290398	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153793	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.12	chr7	-	4745	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	-72	intron_retention	FALSE	canonical	3	1234	junction_19	87.7634695804455	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAAGTGTGTTCCTGTC	NA	False	NA	NA	False	GATAAA	-15	NA	143153809	143111038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.120	chr7	-	4050	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	26	junction_17	328.471187454325	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCTGGTCTGCCCTC	NA	False	NA	-5	True	AATAAA	-13	NA	143153797	143111445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143142228_143142321_143153718
ES.32328.121	chr7	-	3431	20	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	330.985266344888	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCTGGTCTGCCCTC	NA	False	NA	-5	True	AATAAA	-13	NA	143153791	143111445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138382_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.122	chr7	-	3112	22	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	4	-2	intron_retention	FALSE	canonical	3	60	junction_19	430.656341360187	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCTGGTCTGCCCTC	NA	False	NA	-5	True	AATAAA	-13	NA	143153823	143111445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143146148_143146398_143153718
ES.32328.123	chr7	-	4319	20	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_4	504.571478317296	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCTGGTCTGCCCTC	NA	False	NA	-5	True	AATAAA	-13	NA	143153791	143111445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118022_143118090_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.124	chr7	-	4246	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	-2	intron_retention	FALSE	canonical	3	26	junction_17	328.340439855411	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTCTGGTCTGCCCTC	NA	False	NA	-5	True	AATAAA	-13	NA	143153806	143111445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143142228_143142321_143153718
ES.32328.126	chr7	-	3680	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	500.77156171731	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGAGGTCTGGTCTGCCC	NA	False	NA	-7	True	AATAAA	-11	NA	143153791	143111447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115591_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143129343_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.127	chr7	-	2412	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	2	27	junction_2	318.217158556857	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGAGGTCTGGTCTGC	NA	False	NA	-9	True	AATAAA	-9	NA	143153809	143111449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.128	chr7	-	3165	18	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	10	-653	intron_retention	FALSE	canonical	3	290	junction_16	371.078713704661	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGACATTGGACAGTGC	NA	False	NA	NA	False	AAAAAG	-2	NA	143153807	143116137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.129	chr7	-	3374	1	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-538	-1726	mono-exon	FALSE	NA	NA	NA	NA	NA	998	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGATAGATAGATAGAT	NA	False	NA	NA	False	NA	NA	NA	143128884	143125510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143125500_143128900
ES.32328.13	chr7	-	2564	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-33	-69	1	68	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTCCTAGTCCATTGAG	NA	False	NA	66	True	NA	NA	NA	143153826	143111374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.130	chr7	-	173	1	Intergenic	novelGene_26400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	958	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCTGGAGCGAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	143135156	143134983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143135000_143135200
ES.32328.14	chr7	-	2855	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	-41	408	-41	68	multi-exon	FALSE	canonical	3	290	junction_21	336.211639490553	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTCCTAGTCCATTGAG	NA	False	NA	66	True	NA	NA	NA	143153868	143111374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.15	chr7	-	2765	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	1	intron_retention	FALSE	canonical	3	26	junction_18	322.422487410248	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143142228_143142321_143153718
ES.32328.16	chr7	-	4250	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	1	intron_retention	FALSE	canonical	3	121	junction_3	307.812713620907	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153785	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.17	chr7	-	8030	18	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	1	intron_retention	FALSE	canonical	3	20	junction_9	456.74490696077	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153806	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.18	chr7	-	4062	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_14	504.93297362248	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143129744_143130040_143130109_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.19	chr7	-	9782	17	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	1	intron_retention	FALSE	canonical	3	1234	junction_16	93.3198255664358	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.2	chr7	-	6737	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	8	3704	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	418.270632861129	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGACATTGGATGGTTG	NA	False	NA	NA	False	ATTAAA	-29	NA	143153809	143107262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150797_143150876_143153718
ES.32328.20	chr7	-	3908	15	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-2013	1	intron_retention	FALSE	canonical	3	1254	junction_14	89.7728709986872	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143130359	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322
ES.32328.21	chr7	-	6228	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-4	1	intron_retention	FALSE	canonical	3	121	junction_3	309.980510140019	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153797	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.22	chr7	-	4683	22	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	7	1	intron_retention	FALSE	canonical	3	20	junction_12	509.548593077719	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153786	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.23	chr7	-	3047	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-4	1	intron_retention	FALSE	canonical	3	1234	junction_20	87.9256930595375	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153797	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.24	chr7	-	7115	19	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	1	intron_retention	FALSE	canonical	3	290	junction_17	366.737185979615	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.25	chr7	-	4252	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	1	intron_retention	FALSE	canonical	3	20	junction_11	428.011246931667	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153791	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.26	chr7	-	3192	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-4	1	intron_retention	FALSE	canonical	3	290	junction_19	350.932885321396	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153797	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.27	chr7	-	3287	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	5	1	intron_retention	FALSE	canonical	3	290	junction_20	343.75565466386	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153788	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.28	chr7	-	4731	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	1	intron_retention	FALSE	canonical	3	1234	junction_18	90.0291619421174	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143153806	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.29	chr7	-	6044	10	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-778	1	intron_retention	FALSE	canonical	3	1332	junction_2	79.1629043940327	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTCTGCCCTCTCAG	NA	False	NA	-1	True	AATAAA	-17	NA	143129124	143111441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143124408_143125220_143125334_143128249
ES.32328.3	chr7	-	6756	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	21	-3555	11	3555	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGATCCCACAGTTGCA	NA	False	NA	NA	False	NA	NA	NA	143153806	143107411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.30	chr7	-	4454	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	10	0	intron_retention	FALSE	canonical	3	20	junction_12	428.865348915018	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153807	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.34	chr7	-	7627	19	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	20	junction_10	445.242855773435	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153796	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.35	chr7	-	2457	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_20	300.317345380695	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153806	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143153718
ES.32328.36	chr7	-	2932	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	6	0	intron_retention	FALSE	canonical	3	1234	junction_19	97.8495368203431	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153787	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.37	chr7	-	2393	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_3	295.222475431665	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.39	chr7	-	4338	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	1234	junction_19	87.7634695804455	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153806	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.4	chr7	-	6525	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-31	-4032	3	3555	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGATCCCACAGTTGCA	NA	False	NA	NA	False	NA	NA	NA	143153824	143107411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.40	chr7	-	2364	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	324.174351237108	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153793	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.41	chr7	-	4647	18	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	121	junction_3	316.382515625898	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.42	chr7	-	2884	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	493.807896033726	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153806	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124860_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.43	chr7	-	2526	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	487.199199421916	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112914_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.44	chr7	-	2453	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.432152603581	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115652_143116693_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.45	chr7	-	2476	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.06880189026	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153809	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113439_143115591_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.46	chr7	-	2869	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	10	0	intron_retention	FALSE	canonical	3	1234	junction_20	95.6375841392912	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153807	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.48	chr7	-	4482	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_13	432.109740112393	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124860_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.49	chr7	-	2787	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	121	junction_3	302.607999081375	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153793	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.5	chr7	-	4727	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-7	-2258	-7	1781	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATATGCTTAAAACCA	NA	False	NA	NA	False	ATTAAA	-15	NA	143153800	143109185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.50	chr7	-	4570	21	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	9	0	intron_retention	FALSE	canonical	3	60	junction_18	438.530797094115	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153808	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143146148_143146398_143153718
ES.32328.51	chr7	-	2545	23	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	498.26485704753	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153793	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130318_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150797_143150876_143153718
ES.32328.52	chr7	-	2894	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	0	intron_retention	FALSE	canonical	3	20	junction_10	492.683052276004	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153785	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.53	chr7	-	2553	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	418.411461155698	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143143359_143143452_143153718
ES.32328.55	chr7	-	2525	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	60	junction_19	306.803760570173	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140912_143142228_143142321_143153718
ES.32328.56	chr7	-	2652	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	27	junction_2	439.860852044141	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153793	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.57	chr7	-	3631	22	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	493.401245555426	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153809	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143129343_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.58	chr7	-	2576	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	411.870860066479	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.59	chr7	-	4591	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	7	0	intron_retention	FALSE	canonical	3	290	junction_19	349.618345485474	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153810	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.6	chr7	-	4247	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	31	-1056	-3	1056	multi-exon	FALSE	canonical	3	290	junction_21	336.211639490553	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACGCTTTCTGCCCATGTC	NA	False	NA	NA	False	AATATA	-17	NA	143153796	143109910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.61	chr7	-	2350	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_11	318.812186090808	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153809	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.62	chr7	-	2970	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_11	420.841371917567	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153793	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.63	chr7	-	1435	11	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	579.471655907345	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.64	chr7	-	4525	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	560.14738504301	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153772	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143114877_143114984_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.65	chr7	-	3221	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	121	junction_3	433.370407388414	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.66	chr7	-	2581	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_11	439.63278327143	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.68	chr7	-	2398	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	9046	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_20	314.663216788998	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143141443	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143141341
ES.32328.69	chr7	-	2457	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	315.910927771918	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153801	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123660_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.7	chr7	-	2959	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	-17	-480	7	3	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTAGCCTTCGCTGA	NA	False	NA	NA	False	NA	NA	NA	143153810	143110963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.70	chr7	-	4514	20	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	-8	0	intron_retention	FALSE	canonical	3	121	junction_3	440.24182475763	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153801	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.71	chr7	-	2596	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	414.688972863851	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124428_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.72	chr7	-	3049	14	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-923	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	383.635150884382	1050	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143129269	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143125334_143128249
ES.32328.73	chr7	-	2504	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	316.06880189026	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153826	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115587_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.74	chr7	-	2485	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	424.411894016076	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153791	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115591_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124428_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.76	chr7	-	3759	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_14	425.881564024511	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153768	143111442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143129744_143130169_143130286_143130400_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.77	chr7	-	2188	9	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-260	0	intron_retention	FALSE	canonical	3	1332	junction_2	80.6697550200817	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143124196	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143123674_143123756
ES.32328.78	chr7	-	3270	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	1234	junction_18	99.7486965786311	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.79	chr7	-	2971	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	121	junction_3	302.111736589365	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.8	chr7	-	2980	17	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	10955	2	intron_retention	FALSE	canonical	3	1254	junction_14	87.3033504511711	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCTAGCCTTCGCTG	NA	False	NA	NA	False	NA	NA	NA	143139534	143110964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435
ES.32328.81	chr7	-	2790	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	4	0	intron_retention	FALSE	canonical	3	290	junction_20	342.975065699549	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153789	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.82	chr7	-	2371	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	321.439947735187	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.84	chr7	-	3790	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	20	junction_11	489.72457565452	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.86	chr7	-	5644	20	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	1234	junction_19	92.5507422401175	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.87	chr7	-	5833	11	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	1638	0	intron_retention	FALSE	canonical	3	23	junction_10	433.605454301488	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143126708	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124816_143125220
ES.32328.89	chr7	-	6479	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1234	junction_18	90.0708397476092	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153798	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.9	chr7	-	3213	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	5	4	5	-4	multi-exon	FALSE	canonical	3	290	junction_21	336.211639490553	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGAATGTGTCTAGCCT	NA	False	NA	NA	False	NA	NA	NA	143153822	143110970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.90	chr7	-	2453	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	315.733857039003	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153790	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138390_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.92	chr7	-	2925	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_21	427.490700857607	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153786	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143150797_143150876_143153718
ES.32328.93	chr7	-	2469	22	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	313.744606335368	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153806	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112870_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.94	chr7	-	4705	12	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	228	0	intron_retention	FALSE	canonical	1	12	junction_11	418.46350196802	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143128118	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124428_143125220
ES.32328.95	chr7	-	4963	20	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	290	junction_18	358.1716575723	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.96	chr7	-	3546	21	NNC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	20	junction_11	431.170439037743	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153791	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.97	chr7	-	3120	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	7	0	intron_retention	FALSE	canonical	3	290	junction_20	343.696096577661	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153810	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32328.98	chr7	-	4195	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	1234	junction_18	97.7081191263545	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153768	143111443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143124408_143125220_143125334_143128249_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ES.32328.99	chr7	-	2842	24	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	546.239015799725	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGTCTGGTCTGCCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	143153791	143111444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123693_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ES.32329.1	chr7	+	167	1	Intergenic	novelGene_26402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATAATTCCA	NA	False	NA	NA	False	NA	NA	NA	143373066	143373233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_143373100_143373200
ES.3233.1	chr10	+	1920	1	Antisense	novelGene_ENSMUSG00000032788.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78278043	78279963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78278000_78280000
ES.32330.1	chr7	+	3811	8	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-62	1	intron_retention	TRUE	canonical	0	0	junction_1	147.698534667265	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGTACTGTCTCCTG	NA	False	NA	33	True	NA	NA	NA	143376819	143402148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143378315_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.10	chr7	+	2323	8	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.914708103112	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTTATGTTGTACTG	NA	False	NA	26	True	NA	NA	NA	143383950	143402141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143384003_143390374_143390467_143391498_143391722_143394207_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.11	chr7	+	3628	9	NNC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.604382950417	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383950	143402147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143384003_143385396_143386658_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.12	chr7	+	2507	8	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	144.870808033945	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383950	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143384003_143390374_143390467_143391498_143391863_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.13	chr7	+	2273	7	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	-14	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	155.689238192268	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTACTGTCTCCTGAA	NA	False	NA	35	True	NA	NA	NA	143383956	143402150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143390467_143391498_143391722_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.14	chr7	+	4601	6	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	4	junction_4	167.248796707181	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTATGTTGTACTGTCT	NA	False	NA	29	True	NA	NA	NA	143383956	143402144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143390467_143391498_143394261_143394894_143395109_143399177_143399310_143400789
ES.32330.15	chr7	+	4933	8	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_1	179.938765094333	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383959	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143387545_143387674_143390374_143390467_143391498_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.16	chr7	+	5810	6	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	394	junction_3	16.3291151015602	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTTATGTTGTACTG	NA	False	NA	26	True	NA	NA	NA	143383981	143402141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.17	chr7	+	2367	8	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	134.821272469162	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATGTTGTACTGTCTC	NA	False	NA	30	True	NA	NA	NA	143383995	143402145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143384050_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.18	chr7	+	4903	7	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_1	155.68852451824	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383995	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384137_143390374_143390467_143391498_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.19	chr7	+	5119	9	NIC	ENSMUSG00000058454.16	novel	1652	9	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	173.432939129221	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143384021	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143386658_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.2	chr7	+	7484	5	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	32	0	intron_retention	TRUE	canonical	3	394	junction_3	14.3003496460751	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383394	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143390467_143391498_143395109_143396850_143397056_143399177
ES.32330.20	chr7	+	2319	7	ISM	ENSMUSG00000058454.16	ENSMUST00000141916.8	2752	9	6556	1	-18	0	3prime_fragment	FALSE	canonical	3	394	junction_4	15.8324561160506	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143390369	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.21	chr7	+	2226	6	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	1110	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	165.215737749162	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143391497	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399313_143400789
ES.32330.23	chr7	+	4934	2	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	662	0	intron_retention	FALSE	canonical	3	441	junction_1	0	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143395732	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143399310_143400789
ES.32330.3	chr7	+	2398	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	558	-1	-50	1	3prime_fragment	FALSE	canonical	3	394	junction_5	16.39686381163	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGTACTGTCTCCTG	NA	False	NA	33	True	NA	NA	NA	143383920	143402148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.4	chr7	+	2559	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	-45	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATGTTGTACTGTCTC	NA	False	NA	30	True	NA	NA	NA	143383925	143402145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.5	chr7	+	3868	7	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	568	-1	-40	1	intron_retention	FALSE	canonical	3	394	junction_5	14.2009389360939	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGTACTGTCTCCTG	NA	False	NA	33	True	NA	NA	NA	143383930	143402148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177
ES.32330.6	chr7	+	2448	9	NNC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	179.484635484489	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383930	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_143384003_143390374_143390467_143391498_143391722_143391800_143391863_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.7	chr7	+	2510	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	173.432939129221	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383934	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143387545_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.8	chr7	+	2106	7	NIC	ENSMUSG00000058454.16	novel	2815	9	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	155.689238192268	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGTTGTACTGTCTCC	NA	False	NA	31	True	NA	NA	NA	143383937	143402146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143390467_143391498_143391722_143395076_143395109_143396850_143397056_143399177_143399310_143400789
ES.32330.9	chr7	+	4822	7	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	-26	1	intron_retention	FALSE	canonical	3	394	junction_4	16.5998661306516	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTGTACTGTCTCCTG	NA	False	NA	33	True	NA	NA	NA	143383944	143402148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143384003_143390374_143390467_143391498_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ES.32331.1	chr7	-	3268	11	Fusion	ENSMUSG00000010751.16_ENSMUSG00000045362.9	novel	3062	8	NA	NA	8	-207	multi-exon	TRUE	canonical	0	0	junction_1	70.028280001725	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	143203381	143161606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_143163798_143165449_143165597_143168585_143168663_143171577_143171690_143172046_143172176_143173079_143173168_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.10	chr7	-	4208	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	8	-1918	-1	1	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATCTGGCTTGAATTGGC	NA	False	NA	NA	False	NA	NA	NA	143203390	143188543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.11	chr7	-	1875	2	Fusion	ENSMUSG00000010751.16_ENSMUSG00000037613.17	novel	3353	6	NA	NA	-18027	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATCTGGCTTGAATT	8851	False	NA	NA	False	NA	NA	NA	143221425	143188546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_143188626_143219629
ES.32331.12	chr7	-	2192	7	NNC	ENSMUSG00000010751.16	novel	2298	7	NA	NA	-1	-751	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.3641434483543	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTCAGTGCCTTGCT	NA	False	NA	NA	False	AGTAAA	-17	NA	143203399	143189295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143189401_143190628_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.13	chr7	-	1588	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	2	708	2	-708	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGAACAGTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	143203396	143191169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.14	chr7	-	940	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	15	3215	6	1235	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACACAGCTTGAACATAG	NA	False	NA	NA	False	NA	NA	NA	143203383	143191759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.15	chr7	-	622	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	22	3526	13	924	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGCTTCCTTTTATTGC	NA	False	NA	-3	True	GATAAA	-17	NA	143203376	143192070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.16	chr7	-	2092	5	NIC	ENSMUSG00000010751.16	novel	564	6	NA	NA	8	924	intron_retention	FALSE	canonical	3	105	junction_3	24.963723680573	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGCTTCCTTTTATTGC	NA	False	NA	-3	True	GATAAA	-17	NA	143203381	143192070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.17	chr7	-	4197	1	NIC	ENSMUSG00000010751.16	novel	4170	6	NA	NA	20	-6178	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143203369	143199172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143199200_143203400
ES.32331.18	chr7	-	3796	22	NIC	ENSMUSG00000037606.19	novel	3775	22	NA	NA	-44	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.88441513689613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTTTTGGGGGAATC	NA	False	NA	NA	False	AATAAA	-14	NA	143310766	143242499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143310672
ES.32331.19	chr7	-	3780	22	FSM	ENSMUSG00000037606.19	ENSMUST00000119499.8	3775	22	-7	2	-7	-2	multi-exon	FALSE	canonical	0	0	junction_10	1.94248362422582	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCTTTTGGGGGAAT	5763	False	NA	NA	False	AATAAA	-13	NA	143294085	143242500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143294006
ES.32331.2	chr7	-	178	1	Intergenic	novelGene_26401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACATTTT	NA	False	NA	NA	False	NA	NA	NA	143177715	143177537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143177500_143177700
ES.32331.21	chr7	-	2661	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	-20	0	-12	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	AATAAA	-25	NA	143376598	143349320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.22	chr7	-	3313	21	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_6	23.6970462294354	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	AATAAA	-25	NA	143376566	143349320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357701_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374459_143374557_143374908_143374970_143376395
ES.32331.23	chr7	-	2675	22	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	19.6798641294648	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAAAATAAGCTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	143376571	143349330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374459_143374511_143374908_143374970_143376395
ES.32331.24	chr7	-	7235	19	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	7	-10	intron_retention	TRUE	non_canonical	0	0	junction_4	24.8978778410461	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAAAATAAGCTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	143376571	143349330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352848_143353527_143355738_143355773_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374459_143374511_143374908_143374970_143376395
ES.32331.25	chr7	-	4560	19	NIC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	-11	13	intron_retention	FALSE	canonical	1	3	junction_12	15.9032569069016	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTATTTTATTATTAT	NA	False	NA	-3	True	TATAAA	-17	NA	143376566	143349573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143365038_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.26	chr7	-	2400	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	-12	253	-4	13	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTATTTTATTATTAT	NA	False	NA	-3	True	TATAAA	-17	NA	143376590	143349573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.27	chr7	-	6356	18	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	-5	3	intron_retention	FALSE	canonical	0	0	junction_5	16.8401809818579	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTTTAAAGTGTATT	NA	False	NA	-13	True	TATAAA	-7	NA	143376547	143349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143357701_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.28	chr7	-	4625	20	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_5	24.3554017738954	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTTTAAAGTGTATT	NA	False	NA	-13	True	TATAAA	-7	NA	143376579	143349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374459_143374511_143374908_143374970_143376395
ES.32331.29	chr7	-	6753	17	NIC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	6	3	intron_retention	FALSE	canonical	1	3	junction_11	16.556602723687	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTTTAAAGTGTATT	NA	False	NA	-13	True	TATAAA	-7	NA	143376549	143349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366499_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.3	chr7	-	6713	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	7	-2550	-2	2548	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGTTCGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	143203391	143185994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.30	chr7	-	2814	19	NNC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	-3	3	intron_retention	FALSE	canonical	0	0	junction_6	21.0798013437356	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTTTTAAAGTGTATT	NA	False	NA	-13	True	TATAAA	-7	NA	143376545	143349583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357701_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366499_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ES.32331.31	chr7	-	3246	15	NNC	ENSMUSG00000031090.15	novel	2142	19	NA	NA	11532	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	28.1421319703525	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATATAAACAAGAATG	NA	False	NA	-31	True	NA	NA	NA	143364953	143349601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143353838_143354102_143355425_143355738_143355773_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905
ES.32331.4	chr7	-	8154	5	NIC	ENSMUSG00000010751.16	novel	4170	6	NA	NA	17	2543	intron_retention	FALSE	canonical	3	105	junction_3	24.963723680573	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACCCTCTTGTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	143203372	143185999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.5	chr7	-	4805	6	NIC	ENSMUSG00000010751.16	novel	2298	7	NA	NA	18	3	intron_retention	FALSE	canonical	3	18	junction_1	53.9384834788669	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGAATTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	143203371	143188539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143192174_143192981_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.6	chr7	-	4214	7	NNC	ENSMUSG00000010751.16	novel	2298	7	NA	NA	18	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	69.9595121004523	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGAATTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	143203371	143188539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143192174_143193638_143193713_143194488_143194673_143197012_143197142_143198517_143198616_143198926_143198935_143203284
ES.32331.7	chr7	-	4180	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	-5	-5	-5	3	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGAATTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	143203403	143188539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.8	chr7	-	5617	5	NIC	ENSMUSG00000010751.16	novel	4170	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	105	junction_3	24.963723680573	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	143203378	143188542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ES.32331.9	chr7	-	3354	3	Fusion	ENSMUSG00000010751.16_ENSMUSG00000037613.17	novel	4170	6	NA	NA	-165818	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	143405427	143188542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr7_-_143189415_143220727_143220871_143403088
ES.32332.1	chr7	-	180	1	Intergenic	novelGene_26403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	143465852	143465672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143465700_143465900
ES.32333.1	chr7	-	680	1	Intergenic	novelGene_26404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143792353	143791673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_143791700_143792400
ES.32334.1	chr7	+	3241	3	NIC	ENSMUSG00000037541.23	novel	4418	10	NA	NA	-12470	-8180	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGGTTCTAGAACA	NA	False	NA	NA	False	AATAAA	-19	NA	143959091	143966221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_143959198_143960857_143960970_143963198
ES.32335.1	chr7	-	7156	1	Antisense	novelGene_ENSMUSG00000037541.23_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTAAATTTTATGTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	143983568	143976412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_143976400_143983600
ES.32336.1	chr7	+	3836	3	Antisense	novelGene_ENSMUSG00000031078.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143993380	144002771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_143993835_143995434_143995585_143999539
ES.32337.1	chr7	-	3033	19	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	4	4299	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	332.005377949898	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCTTAAAAAATTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	144024478	143985170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143985182_143989467_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.13	chr7	-	3016	18	NNC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	340.118969619176	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	-18	True	AATAAA	-16	NA	144024463	143989469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144003636_144003759_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.15	chr7	-	3591	9	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	16690	0	-1468	0	3prime_fragment	FALSE	canonical	3	340	junction_7	231.220538663848	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	-18	True	AATAAA	-16	NA	144007792	143989469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284
ES.32337.17	chr7	-	3051	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	337.488823344349	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144024487	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017759_144019690_144019785_144024425
ES.32337.19	chr7	-	4937	5	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	25806	1	966	-1	3prime_fragment	FALSE	canonical	3	725	junction_2	126.975145205666	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	143998676	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435
ES.32337.2	chr7	-	3073	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	234	-21	-30	19	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCCATGTTTT	NA	False	NA	1	True	AATAAA	-35	NA	144024512	143989450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.20	chr7	-	3063	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	230	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	341.070115268711	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144024252	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024155
ES.32337.21	chr7	-	3088	19	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	385.692530903908	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144024457	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144018824_144018915_144019690_144019785_144024425
ES.32337.22	chr7	-	3324	17	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	2	9	junction_7	263.070807958618	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144024488	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003759_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.24	chr7	-	4678	8	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	-1740	-1	intron_retention	FALSE	canonical	2	9	junction_7	340.041113960758	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTGATCTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	144008064	143989470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003759_144005763
ES.32337.25	chr7	-	5328	16	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	725	junction_2	100.56957790505	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024488	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.29	chr7	-	3095	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	337.950437593882	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024466	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019601_144019785_144024425
ES.32337.3	chr7	-	2935	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	-13	-9	-13	9	multi-exon	FALSE	canonical	3	340	junction_7	190.956545694956	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGCAGTGCTTGGTC	NA	False	NA	-9	True	AATAAA	-25	NA	144024495	143989460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.30	chr7	-	5732	15	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	725	junction_2	101.873495982387	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024482	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.31	chr7	-	2945	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	256.203476661202	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024449	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004758_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.32	chr7	-	2929	17	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	300.117314301841	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024477	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017759_144019690_144019785_144024425
ES.32337.34	chr7	-	3006	18	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	337.642262724699	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024492	143989471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144003673_144003759_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.35	chr7	-	2905	17	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	345.168567288144	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024477	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.41	chr7	-	2947	17	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-37	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	335.946401044869	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024519	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.42	chr7	-	2963	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	340.004935848561	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024459	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011440_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.43	chr7	-	2849	16	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	309.198850076919	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024476	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.44	chr7	-	3015	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	400.76237900914	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024488	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993741_143993836_143995435_143995585_143999555_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.46	chr7	-	2944	17	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	4698	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	347.575390877648	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144019784	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017726_144019700
ES.32337.47	chr7	-	4496	15	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	6	-1	intron_retention	FALSE	canonical	3	340	junction_5	191.332985197247	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024476	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.49	chr7	-	2739	15	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	4740	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	318.716366772997	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144019742	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690
ES.32337.5	chr7	-	4406	17	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-19	1	intron_retention	FALSE	canonical	3	725	junction_2	104.670744927845	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGATCTTCTGCAGT	NA	False	NA	-17	True	AATAAA	-17	NA	144024501	143989468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.50	chr7	-	2872	17	NNC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	302.817027829926	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024478	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011439_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.52	chr7	-	3007	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	338.060384442501	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTGTGATCTTCTG	NA	False	NA	-21	True	AATAAA	-13	NA	144024478	143989472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008422_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.53	chr7	-	2789	15	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	283.216978909911	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTGTGTGATCTTCT	NA	False	NA	-22	True	AATAAA	-12	NA	144024488	143989473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.55	chr7	-	4365	17	NNC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_6	349.78921666305	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTGTGTGATCTTCT	NA	False	NA	-22	True	AATAAA	-12	NA	144024477	143989473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144002241_144003759_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.56	chr7	-	3175	19	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	383.537562343501	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTACTGTGTGATCTTCT	NA	False	NA	-22	True	AATAAA	-12	NA	144024488	143989473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144017852_144018002_144019690_144019785_144024425
ES.32337.58	chr7	-	3296	17	NNC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_9	346.977642471385	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTGTGTGATCTTC	NA	False	NA	-23	True	AATAAA	-11	NA	144024476	143989474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003759_144005763_144005875_144006284_144006384_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.59	chr7	-	3148	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	338.935490080319	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTACTGTGTGATCTTC	NA	False	NA	-23	True	AATAAA	-11	NA	144024477	143989474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991892_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.60	chr7	-	3155	16	NNC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	4	-7	intron_retention	FALSE	non_canonical	0	0	junction_11	404.10229727962	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCATTTACTGTGTGAT	NA	False	NA	-27	True	AATAAA	-7	NA	144024478	143989478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003759_144005763_144005875_144008412_144008524_144010177_144010233_144011405_144011501_144014939_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.61	chr7	-	2669	15	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	1	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	277.690851818481	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTTTTTTGATCCAT	NA	False	NA	-39	True	ATTAAA	-8	NA	144024481	143989490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.62	chr7	-	1756	16	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	-6	99	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	306.926527581656	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGATTTGCTAATGTCTG	NA	False	NA	NA	False	AATACA	-30	NA	144024488	143990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.63	chr7	-	1965	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	259	1062	-5	87	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCCTGCCACAGGATT	NA	False	NA	NA	False	AATACA	-18	NA	144024487	143990533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.7	chr7	-	2959	18	NNC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	258.149054338875	894	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGATCTTCTGCAGT	NA	False	NA	-17	True	AATAAA	-17	NA	144024481	143989468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004779_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32337.9	chr7	-	9025	14	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	3	1	intron_retention	FALSE	canonical	3	340	junction_6	205.702232083232	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGATCTTCTGCAGT	NA	False	NA	-17	True	AATAAA	-17	NA	144024479	143989468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_144003353_144005763_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ES.32338.1	chr7	+	8363	2	Antisense	novelGene_ENSMUSG00000037519.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144061333	144071157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_144068261_144069721
ES.32339.1	chr7	-	5151	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.7831472185768	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGCTGTGAACAGGCG	NA	False	NA	1	True	AATAAA	-27	NA	144107522	144030491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144035015_144035447_144035517_144035996_144036173_144038580_144038679_144038765_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.10	chr7	-	5689	26	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	2	0	intron_retention	FALSE	canonical	2	132	junction_21	22.0109063875162	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107464	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074799_144106006_144106271_144107255
ES.32339.11	chr7	-	6233	13	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	809	0	intron_retention	FALSE	canonical	0	0	junction_1	60.3694643194904	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144061901	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144035015_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865
ES.32339.13	chr7	-	5080	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0662830111369	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107478	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032759_144032831_144034814_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.15	chr7	-	4365	22	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	64.7606092307392	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107522	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038967_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.17	chr7	-	5018	27	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_14	58.9145530086838	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107455	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144063979_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.19	chr7	-	5156	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	59.1315012389801	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAGAGTGCTGTGAACA	NA	False	NA	-3	True	AATAAA	-23	NA	144107499	144030495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144042933_144042997_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.22	chr7	-	7040	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	7	0	intron_retention	FALSE	canonical	2	132	junction_21	23.2511690868508	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAGAGTGCTGTGAACA	NA	False	NA	-3	True	AATAAA	-23	NA	144107459	144030495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.26	chr7	-	4816	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	45.0661742238189	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAGAGTGCTGTGAACA	NA	False	NA	-3	True	AATAAA	-23	NA	144107441	144030495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.27	chr7	-	5298	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	185	junction_17	17.4759767484856	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAAGAGTGCTGTGAAC	NA	False	NA	-4	True	AATAAA	-22	NA	144107528	144030496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.28	chr7	-	5048	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	46.0244164936422	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAAGAGTGCTGTGAAC	NA	False	NA	-4	True	AATAAA	-22	NA	144107416	144030496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144063979_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.3	chr7	-	5121	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107526	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.31	chr7	-	5106	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	45.7337376555331	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAAGAGTGCTGTGAAC	NA	False	NA	-4	True	AATAAA	-22	NA	144107464	144030496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074576_144074696_144074799_144106006_144106271_144107255
ES.32339.33	chr7	-	5132	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.452001576851	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTAAGAGTGCTGTGAA	NA	False	NA	-5	True	AATAAA	-21	NA	144107521	144030497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035443_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073120_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.38	chr7	-	5131	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	57.5532140629834	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTAAGAGTGCTGTGAA	NA	False	NA	-5	True	AATAAA	-21	NA	144107464	144030497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144068608_144068684_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.39	chr7	-	7718	25	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-33	-3	intron_retention	FALSE	canonical	0	0	junction_4	45.7292568336241	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTAAGAGTGCTGTGA	NA	False	NA	-6	True	AATAAA	-20	NA	144107499	144030498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144035517_144035996_144036173_144038580_144038679_144038765_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.44	chr7	-	5416	26	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_2	78.0655519419417	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCCAGTTAAGAGTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	144107440	144030502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144034821_144035164_144035447_144035517_144036000_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061754_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.45	chr7	-	5064	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	59.1315012389801	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCCAGTTAAGAGTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	144107450	144030502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144042427_144042455_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.48	chr7	-	4762	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-31	-110	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTACATTTATTTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	144107497	144030824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.52	chr7	-	4829	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-59	-110	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	46.0244164936422	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTACATTTATTTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	144107525	144030824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144063979_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.56	chr7	-	6517	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	43	-115	intron_retention	FALSE	canonical	2	132	junction_21	23.7900394352628	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTGTCTTACATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	144107423	144030829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.57	chr7	-	4780	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-42	-115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	75.909465243672	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTGTCTTACATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	144107508	144030829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144068608_144068684_144069722_144069858_144071328_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.59	chr7	-	4809	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	26	-115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.4697659379676	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTGTCTTACATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	144107440	144030829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038673_144038765_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061754_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.60	chr7	-	4689	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	23	-116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	59.7289717690428	383	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107443	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068256_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074520_144074696_144074799_144106006_144106271_144107255
ES.32339.61	chr7	-	7629	25	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	23	-116	intron_retention	FALSE	canonical	2	132	junction_19	22.8043840205246	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107443	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.62	chr7	-	5317	1	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-3292	-116	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144036147	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144030800_144036100
ES.32339.63	chr7	-	4926	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-31	-116	intron_retention	FALSE	canonical	2	132	junction_22	22.7260830780627	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107497	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074799_144106006_144106271_144107255
ES.32339.64	chr7	-	4678	28	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	40	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	46.495984162182	383	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107426	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069851_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.65	chr7	-	4621	27	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	1	-116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	60.873778130697	383	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107465	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038770_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144106006_144106271_144107255
ES.32339.66	chr7	-	4767	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	33	-116	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	57.5532140629834	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAACTGTCTTACATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	144107433	144030830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144068608_144068684_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.67	chr7	-	6868	26	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	43	-117	intron_retention	FALSE	canonical	2	132	junction_21	23.0337491520595	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAACTGTCTTACATTT	NA	False	NA	NA	False	AATAAA	-16	NA	144107423	144030831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074799_144106006_144106271_144107255
ES.32339.68	chr7	-	4375	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-38	-204	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCTGTCATATTTTA	NA	False	NA	NA	False	NA	NA	NA	144107504	144031218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.7	chr7	-	5034	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	44.9229616700313	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107510	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.72	chr7	-	4402	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	8	-206	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	57.5532140629834	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTTTCTGTCATATTT	NA	False	NA	NA	False	NA	NA	NA	144107458	144031220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144068608_144068684_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.73	chr7	-	4146	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	22	-271	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	46.6047842732885	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGCATTCTCCTCTA	NA	False	NA	NA	False	TATAAA	-16	NA	144107444	144031285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144106006_144106271_144107255
ES.32339.75	chr7	-	4138	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-32	-364	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	44.9229616700313	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTACTGTAATTATTC	NA	False	NA	NA	False	TATAAA	-31	NA	144107498	144031378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.77	chr7	-	4218	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-42	-365	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTACTGTAATTATT	NA	False	NA	NA	False	TATAAA	-30	NA	144107508	144031379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.81	chr7	-	4215	29	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	33	-368	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	57.5532140629834	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGCATTTACTGTAATT	NA	False	NA	NA	False	TATAAA	-27	NA	144107433	144031382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144068608_144068684_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.82	chr7	-	3970	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	14	-557	combination_of_known_junctions	FALSE	canonical	2	132	junction_22	23.3465570993897	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTGTTTCTTATATT	NA	False	NA	NA	False	CATAAA	-23	NA	144107452	144031571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.84	chr7	-	3125	1	Intergenic	novelGene_26405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	144082270	144079145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144079100_144082300
ES.32339.85	chr7	-	1459	1	Intergenic	novelGene_26406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTACTCAGATGGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	144084007	144082548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144082500_144084000
ES.32339.86	chr7	-	2035	1	Intergenic	novelGene_26407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144098321	144096286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144096300_144098300
ES.32339.87	chr7	-	3549	3	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	16	-28438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.5	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTTAGTCTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	144107450	144102457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144103157_144103615_144106271_144107255
ES.32339.88	chr7	-	4036	2	ISM	ENSMUSG00000037519.18	ENSMUST00000168134.10	5181	31	-12	71963	-12	-28438	5prime_fragment	FALSE	canonical	3	207	junction_1	0	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCTTAGTCTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	144107478	144102457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_144106271_144107255
ES.32339.89	chr7	-	4335	1	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-555	-28475	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144106829	144102494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144102500_144106800
ES.32339.9	chr7	-	4851	27	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.1318338632565	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107476	144030494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144059795_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ES.32339.90	chr7	-	3822	3	NNC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	-32	-28475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.5	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144107498	144102494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144103157_144103353_144106271_144107255
ES.3234.1	chr10	-	5203	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-77	-2	-77	2	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGGTCATTTCTCC	6725	False	NA	0	True	AATAAA	-19	NA	78300886	78272575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.10	chr10	-	5021	12	NNC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	57	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.094203997077	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTCTTAGTGTGGTCA	6859	False	NA	-7	True	AATAAA	-12	NA	78300752	78272582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78274947_78274987_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.11	chr10	-	5065	10	NIC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	-2	-6	combination_of_known_splicesites	TRUE	canonical	3	55	junction_9	94.2620460913794	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTCTTAGTGTGGTC	6800	False	NA	-8	True	AATAAA	-11	NA	78300811	78272583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78300594
ES.3234.13	chr10	-	1917	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	63	3144	63	-3144	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCGGCTCTCACTGGGC	6865	False	NA	NA	False	NA	NA	NA	78300746	78275721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.14	chr10	-	1564	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-10	3570	-10	-3570	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCATTAGAGTTTCTG	6792	False	NA	0	True	NA	NA	NA	78300819	78276147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.16	chr10	-	1491	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-39	3672	-39	-3672	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGTGTCGGCGCTGTC	6763	False	NA	-102	True	NA	NA	NA	78300848	78276249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.17	chr10	-	1305	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	-39	3858	-39	-3858	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGATTCACAACCA	6763	False	NA	0	True	TTTAAA	-21	NA	78300848	78276435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.2	chr10	-	4519	12	NNC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	38	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.094203997077	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6840	False	NA	-5	True	AATAAA	-14	NA	78300771	78272580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78275757_78276320_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.20	chr10	-	1111	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	49	3964	49	-3964	multi-exon	FALSE	canonical	3	285	junction_4	40.3910881259715	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCGACATCCGTGTTCC	6851	False	NA	-106	True	NA	NA	NA	78300760	78276541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.3234.3	chr10	-	5132	11	NNC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	104.205566070148	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGTGTGGTCATT	6779	False	NA	-5	True	AATAAA	-14	NA	78300832	78272580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286189_78287312_78287418_78289307_78289363_78300594
ES.3234.5	chr10	-	6985	10	NIC	ENSMUSG00000032788.16	novel	5124	11	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	294	junction_3	38.5557156576887	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAGTGTGGTCAT	6792	False	NA	-6	True	AATAAA	-13	NA	78300819	78272581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ES.32340.1	chr7	+	176	1	Intergenic	novelGene_26408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	144121733	144121909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144121700_144121900
ES.32341.1	chr7	-	174	1	Intergenic	novelGene_26409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	144124071	144123897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144123900_144124100
ES.32342.1	chr7	+	2555	1	Antisense	novelGene_ENSMUSG00000031077.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCTAAGCCCATCGA	NA	False	NA	NA	False	NA	NA	NA	144130016	144132571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_+_144130000_144132600
ES.32343.1	chr7	-	2911	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	-15	1007	-15	-1007	multi-exon	FALSE	canonical	3	26	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGTGACTCTCCTTGC	NA	False	NA	-9	True	AATAAA	-22	NA	144136215	144132061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144134598_144135840
ES.32343.2	chr7	-	1525	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	2	2376	2	-2376	multi-exon	FALSE	canonical	3	26	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCTGGGTGTGAT	NA	False	NA	-7	True	AATAAA	-19	NA	144136198	144133430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144134598_144135840
ES.32343.3	chr7	-	2770	1	Genic_Genomic	ENSMUSG00000031077.8	novel	NA	NA	NA	NA	-1	-2377	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTTGGCTGGGTGTGA	NA	False	NA	-8	True	AATAAA	-18	NA	144136201	144133431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_144133400_144136200
ES.32344.1	chr7	-	4477	25	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	15	90	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	7.1820329449413	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATCCTTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	144232607	144142195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157239_144157313_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.10	chr7	-	4601	25	NNC	ENSMUSG00000031075.20	novel	4585	25	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	7.1820329449413	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144292331	144142287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
ES.32344.11	chr7	-	4441	24	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	6.22756844166744	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144232594	144142287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175400_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.14	chr7	-	4465	24	NNC	ENSMUSG00000031075.20	novel	4585	25	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	6.22756844166744	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCCTGGTCTCTCCTGG	NA	False	NA	NA	False	AATAAA	-10	NA	144232608	144142289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172672_144175400_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.15	chr7	-	1741	13	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	-11	2078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.26244143216009	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCCAGGAGTCAGCAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	144232633	144172424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.3	chr7	-	6911	23	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_12	6.35258781134322	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144232633	144142285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.4	chr7	-	4571	25	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	8.01907448247961	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144232542	144142285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144201908_144202083_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.6	chr7	-	4669	26	NNC	ENSMUSG00000031075.20	novel	4644	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	8.0544149384049	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144292328	144142285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144202311_144202378_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292096
ES.32344.7	chr7	-	5074	24	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_11	7.89031614365869	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144232611	144142285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175394_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144201908_144202083_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
ES.32344.9	chr7	-	4574	18	NNC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	6540	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	6.44862582931474	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTGGTCTCTCCTGGCT	NA	False	NA	NA	False	AATAAA	-12	NA	144202864	144142287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172660_144175400_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760
ES.32345.1	chr7	-	7064	2	Antisense	novelGene_ENSMUSG00000108851.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATAATAATATGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	144301203	144294063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144296067_144296142
ES.32346.1	chr7	-	184	1	Intergenic	novelGene_26410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCACAGAAATT	NA	False	NA	NA	False	NA	NA	NA	144344480	144344296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144344300_144344500
ES.32347.1	chr7	+	130	1	Intergenic	novelGene_26411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	144344969	144345099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144345000_144345100
ES.32348.1	chr7	-	2094	4	Intergenic	novelGene_26412	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGAAGTCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	144375762	144361460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144363017_144368346_144368447_144368528_144368705_144375500
ES.32348.2	chr7	-	2047	4	Intergenic	novelGene_26413	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCTGCTGAAGTCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	144375824	144361464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144363017_144368346_144368447_144368528_144368600_144375500
ES.32349.1	chr7	+	1441	4	FSM	ENSMUSG00000031074.15	ENSMUST00000155320.8	599	4	-217	-625	-217	625	multi-exon	FALSE	canonical	3	7	junction_1	23.9768406778059	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144391602	144397081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144391847_144392341_144392665_144394407_144394512_144396311
ES.32349.2	chr7	+	2534	4	FSM	ENSMUSG00000031074.15	ENSMUST00000155320.8	599	4	-210	-1725	-210	8	multi-exon	FALSE	canonical	3	7	junction_1	23.9768406778059	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTTGGTGATGTTTTG	NA	False	NA	11	True	NA	NA	NA	144391609	144398181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144391847_144392341_144392665_144394407_144394512_144396311
ES.32349.3	chr7	+	2688	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	-381	-8	131	8	multi-exon	FALSE	canonical	3	54	junction_2	3.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTTGGTGATGTTTTG	NA	False	NA	11	True	NA	NA	NA	144391950	144398181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144392665_144394407_144394512_144396311
ES.32349.4	chr7	+	1588	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	-380	1091	132	626	multi-exon	FALSE	canonical	3	54	junction_2	3.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGGGATACAGACTTA	NA	False	NA	10	True	ATTAAA	-25	NA	144391951	144397082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144392665_144394407_144394512_144396311
ES.32349.5	chr7	+	2479	4	NNC	ENSMUSG00000031074.15	novel	2299	3	NA	NA	161	625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.4558441227157	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144391980	144397081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144392665_144392974_144393896_144394407_144394512_144396311
ES.32349.6	chr7	+	2404	3	NNC	ENSMUSG00000031074.15	novel	2299	3	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATATGGTTGGTGATGT	NA	False	NA	7	True	NA	NA	NA	144392340	144398177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144392665_144394297_144394512_144396311
ES.32349.7	chr7	+	1534	5	NNC	ENSMUSG00000031074.15	novel	2299	3	NA	NA	16	625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.3826859021798	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144392347	144397081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144392665_144392974_144393165_144393742_144393896_144394407_144394512_144396311
ES.32349.8	chr7	+	4765	4	NNC	ENSMUSG00000031074.15	novel	2299	3	NA	NA	58	2728	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	27.2559881290128	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTTTGTTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	144392389	144400901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144392665_144394407_144394512_144396311_144399313_144399516
ES.32349.9	chr7	+	2032	3	NNC	ENSMUSG00000031074.15	novel	599	4	NA	NA	406	625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144392737	144397081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144393896_144394407_144394512_144396311
ES.3235.1	chr10	+	2060	1	Intergenic	novelGene_2532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGCAGGGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	78308491	78310551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_78308500_78310600
ES.32350.1	chr7	+	3390	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	-354	-6	-354	6	multi-exon	FALSE	canonical	3	677	junction_2	22.5	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGCTTTGTCTTTT	7648	False	NA	34	True	ATTAAA	-24	NA	144414768	144418986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144415570_144415968_144416073_144416501
ES.32350.10	chr7	+	2962	3	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	354.5	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTCTGCTTTGTC	8003	False	NA	30	True	ATTAAA	-20	NA	144415123	144418982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416004_144416501
ES.32350.11	chr7	+	3069	3	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	361	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCACCTGTGTCTGCTTT	8003	False	NA	27	True	ATTAAA	-17	NA	144415123	144418979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416114_144416501
ES.32350.12	chr7	+	3861	1	Genic_Genomic	ENSMUSG00000050917.6	novel	NA	NA	NA	NA	1	4	mono-exon	FALSE	NA	NA	NA	NA	NA	725	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTGCTTTGTCTT	8003	False	NA	32	True	ATTAAA	-22	NA	144415123	144418984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_144415100_144419000
ES.32350.13	chr7	+	2961	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	330.258821061435	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8003	False	NA	28	True	ATTAAA	-18	NA	144415123	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144417775_144417842
ES.32350.14	chr7	+	2699	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	324.610878163721	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTGCTTTGTCTT	8003	False	NA	32	True	ATTAAA	-22	NA	144415123	144418984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144416652_144416985
ES.32350.15	chr7	+	6024	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	1	-2995	1	2995	multi-exon	FALSE	canonical	3	677	junction_2	22.5	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAGAGTTAGAGG	8003	False	NA	NA	False	NA	NA	NA	144415123	144421975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144415570_144415968_144416073_144416501
ES.32350.16	chr7	+	2721	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	330.258821061435	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8005	False	NA	28	True	ATTAAA	-18	NA	144415125	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144417503_144417808
ES.32350.17	chr7	+	2933	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	327.905474184253	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8005	False	NA	28	True	ATTAAA	-18	NA	144415125	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144417108_144417201
ES.32350.18	chr7	+	3430	2	ISM	ENSMUSG00000050917.6	ENSMUST00000208265.2	395	3	14022	-2357	3	4	3prime_fragment	FALSE	canonical	3	677	junction_1	0	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTGCTTTGTCTT	8005	False	NA	32	True	ATTAAA	-22	NA	144415125	144418984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_144416073_144416501
ES.32350.19	chr7	+	3459	2	ISM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	3	-3	3	3	intron_retention	FALSE	canonical	3	722	junction_1	0	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTCTGCTTTGTCT	8005	False	NA	31	True	ATTAAA	-21	NA	144415125	144418983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_144415570_144415968
ES.32350.2	chr7	+	2756	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	-172	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	330.258821061435	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTGCTTTGTCTT	7830	False	NA	32	True	ATTAAA	-22	NA	144414950	144418984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415071_144415520_144415570_144415968_144416073_144416501
ES.32350.20	chr7	+	2682	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	330.258821061435	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8008	False	NA	28	True	ATTAAA	-18	NA	144415128	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144416652_144416993
ES.32350.21	chr7	+	5109	1	Genic_Genomic	ENSMUSG00000050917.6	novel	NA	NA	NA	NA	1627	2878	mono-exon	FALSE	NA	NA	NA	NA	NA	729	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGCAGTGGTGGCACAC	9629	False	NA	NA	False	NA	NA	NA	144416749	144421858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_+_144416700_144421900
ES.32350.22	chr7	+	3810	3	Intergenic	novelGene_26414	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	1820	False	NA	NA	False	NA	NA	NA	144419638	144423936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144421834_144421958_144422674_144423036
ES.32350.3	chr7	+	3112	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	-138	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	336.586789204013	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	7864	False	NA	28	True	ATTAAA	-18	NA	144414984	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416469_144416584_144416671
ES.32350.4	chr7	+	2613	4	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	-131	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	330.258821061435	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTCTGCTTTGTC	7871	False	NA	30	True	ATTAAA	-20	NA	144414991	144418982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144416652_144417201
ES.32350.5	chr7	+	979	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	-116	2167	-116	186	multi-exon	FALSE	canonical	3	677	junction_2	22.5	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTATAATTTTATGT	7886	False	NA	NA	False	TTTAAA	-29	NA	144415006	144416813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144415570_144415968_144416073_144416501
ES.32350.6	chr7	+	3174	3	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	-111	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	356	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTGTCTGCTTTGT	7891	False	NA	29	True	ATTAAA	-19	NA	144415011	144418981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416469
ES.32350.7	chr7	+	2998	3	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	-14	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	361	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGCTTTGTCTTT	7988	False	NA	33	True	ATTAAA	-23	NA	144415108	144418985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416022_144416501
ES.32350.9	chr7	+	2601	5	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	345.874977412359	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8003	False	NA	28	True	ATTAAA	-18	NA	144415123	144418980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144415570_144415968_144416073_144416501_144416652_144416985_144417108_144417201
ES.32351.1	chr7	-	4003	2	Antisense	novelGene_ENSMUSG00000050917.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATGTGAATGAATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	144415422	144410588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144414363_144415193
ES.32351.2	chr7	-	3455	1	Antisense	novelGene_ENSMUSG00000050917.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	144416408	144412953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144413000_144416400
ES.32351.3	chr7	-	1759	2	Antisense	novelGene_ENSMUSG00000050917.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144415581	144412991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144414363_144415193
ES.32352.1	chr7	-	4344	2	Antisense	novelGene_ENSMUSG00000050917.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGAGATTTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	144422565	144418093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144421831_144421958
ES.32353.1	chr7	+	831	3	Intergenic	novelGene_26415	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGTGGTCAGTCCTTT	2269	False	NA	NA	False	NA	NA	NA	144426388	144435165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144426464_144427724_144427842_144434526
ES.32354.1	chr7	-	187	1	Intergenic	novelGene_26416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTAAAAACAGGCAA	2105	False	NA	NA	False	NA	NA	NA	144447671	144447484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144447500_144447700
ES.32355.1	chr7	+	1903	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	-97	4	-97	-4	multi-exon	FALSE	canonical	2	3	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATTTGTTCTATTC	NA	False	NA	NA	False	ATTAAA	-19	NA	144450170	144454686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144450669_144450852_144450957_144453385
ES.32356.1	chr7	+	115	1	FSM	ENSMUSG00000115783.2	ENSMUST00000227063.2	168	1	0	53	0	-53	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACCAAAAAAAAACAAGGTA	NA	False	NA	NA	False	NA	NA	NA	144468206	144468321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144468200_144468300
ES.32357.1	chr7	+	1672	6	NNC	ENSMUSG00000031072.15	novel	2015	5	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.8488805800122	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTGGGATCATTTC	NA	False	NA	10	True	AATAAA	-20	NA	144468869	144474873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346_144473387_144473733
ES.32357.2	chr7	+	3373	4	ISM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	24	-1114	-12	5	intron_retention	FALSE	canonical	3	87	junction_3	4.10960933531265	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	144468895	144475985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960
ES.32357.3	chr7	+	1986	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	28	1	-8	-1	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTCTGTCTGGGATCAT	NA	False	NA	7	True	AATAAA	-17	NA	144468899	144474870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
ES.32357.4	chr7	+	2997	1	NIC	ENSMUSG00000031072.15	novel	2231	4	NA	NA	0	468	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGCTGGCTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	144468909	144471906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_+_144468900_144471900
ES.32357.5	chr7	+	1521	1	FSM	ENSMUSG00000031072.15	ENSMUST00000207094.2	4022	1	1385	1116	1385	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTAGTCTGTCTGG	NA	False	NA	1	True	AATAAA	-11	NA	144473343	144474864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_+_144473300_144474900
ES.32358.1	chr7	-	2895	1	Antisense	novelGene_ENSMUSG00000031072.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	144474872	144471977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr7_-_144472000_144474900
ES.32359.1	chr7	-	3418	1	Intergenic	novelGene_26417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTTGCGGGATAAAGG	NA	False	NA	NA	False	NA	NA	NA	144479408	144475990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144476000_144479400
ES.3236.1	chr10	+	181	1	Intergenic	novelGene_2533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCAGAGGAATGC	NA	False	NA	NA	False	NA	NA	NA	78335656	78335837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_78335700_78335800
ES.32360.1	chr7	+	3745	1	Intergenic	novelGene_26418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTTGAAATGACTTC	NA	False	NA	NA	False	ATTAAA	-24	NA	144496061	144499806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144496100_144499800
ES.32361.10	chr7	-	3356	6	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	98	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.204271299485	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGACAAAAAA	NA	False	NA	-52	True	NA	NA	NA	144493508	144483715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144485297_144485534_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.11	chr7	-	4035	4	NIC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	90	-48	intron_retention	FALSE	canonical	3	385	junction_1	18.4089350286454	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGACAAAAAA	NA	False	NA	-52	True	NA	NA	NA	144493516	144483715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144486509_144487752_144487902_144491030_144491840_144493232
ES.32361.12	chr7	-	3331	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	40	369	40	-369	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAAGACTCTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	144493566	144484036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.13	chr7	-	3240	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-172	672	-116	-672	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGTATCATCTAGCCA	NA	False	NA	78	True	AAAACA	-18	NA	144493778	144484339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.14	chr7	-	3094	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	36	-676	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTCATGTATCATCTA	NA	False	NA	74	True	AAAACA	-14	NA	144493570	144484343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.15	chr7	-	6265	3	NIC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	346	-691	intron_retention	FALSE	canonical	3	385	junction_1	22.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCCTGTTCACAATAC	NA	False	NA	59	True	NA	NA	NA	144493260	144484358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144486509_144487752_144491840_144493232
ES.32361.17	chr7	-	7382	3	NIC	ENSMUSG00000070348.6	novel	1773	4	NA	NA	40	-691	intron_retention	FALSE	canonical	3	335	junction_1	47.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCCTGTTCACAATAC	NA	False	NA	59	True	NA	NA	NA	144493566	144484358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144491191_144491623_144491840_144493232
ES.32361.18	chr7	-	3051	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	72	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	204.534074178363	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCCTGTTCACAATAC	NA	False	NA	59	True	NA	NA	NA	144493534	144484358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491615_144491840_144493232
ES.32361.19	chr7	-	3074	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	-17	-691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.530807185683	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCCTGTTCACAATAC	NA	False	NA	59	True	NA	NA	NA	144493623	144484358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486509_144487752_144487902_144491030_144491191_144491615_144491840_144493232
ES.32361.2	chr7	-	3859	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493659	144483667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.20	chr7	-	2768	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	-679	-707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	165.321656173654	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACAGG	NA	False	NA	43	True	NA	NA	NA	144492613	144484374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144492504
ES.32361.21	chr7	-	2923	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	40	777	40	-777	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTTTTTTGTACTTT	NA	False	NA	-27	True	NA	NA	NA	144493566	144484444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.22	chr7	-	3646	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-1716	1810	-1660	1457	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTTTGTTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	144495322	144485477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.23	chr7	-	1982	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	5	1448	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTTGTGTGTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	144493601	144485486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.24	chr7	-	1768	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	40	1269	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCCTCTCCCCCCAA	NA	False	NA	NA	False	NA	NA	NA	144493566	144485665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.25	chr7	-	3286	3	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	40	2240	40	1027	intron_retention	FALSE	canonical	3	385	junction_1	12.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGCAAACCATTGTTAAA	NA	False	NA	14	True	AAAAAG	-38	NA	144493566	144485907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_144486509_144487752_144487902_144491030
ES.32361.26	chr7	-	1373	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-10	2377	-10	890	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTCTATTAATGTGCT	NA	False	NA	3	True	AATAGA	-23	NA	144493616	144486044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.27	chr7	-	1384	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	38	883	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACTAGTTTTCTATTA	NA	False	NA	-4	True	AATAGA	-16	NA	144493568	144486051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.28	chr7	-	1252	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	98	883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	173.254689691217	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACTAGTTTTCTATTA	NA	False	NA	-4	True	AATAGA	-16	NA	144493508	144486051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486503_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.29	chr7	-	1278	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	-20	2482	-20	785	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGTCTTAAAGAGAGA	NA	False	NA	63	True	NA	NA	NA	144493626	144486149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.3	chr7	-	6771	4	NIC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	98	0	intron_retention	FALSE	canonical	3	335	junction_2	38.8014890894094	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493508	144483667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144486509_144487752_144491191_144491623_144491840_144493232
ES.32361.30	chr7	-	1159	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	98	718	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTTTTTCCTTAA	NA	False	NA	-4	True	NA	NA	NA	144493508	144486216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.4	chr7	-	3561	6	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.204271299485	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493654	144483667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144485302_144485528_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ES.32361.5	chr7	-	3178	3	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	98	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	192.5	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGTTGTCTGTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	144493508	144483668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486509_144487752_144487843_144493260
ES.32361.6	chr7	-	3902	6	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	-3740	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	159.204271299485	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTGTTGTCTGTGTT	NA	False	NA	-5	True	AATAAA	-15	NA	144497402	144483668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232_144493606_144497238
ES.32361.9	chr7	-	3771	1	NIC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	4448	-48	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGACAAAAAA	NA	False	NA	-52	True	NA	NA	NA	144487486	144483715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144483700_144487500
ES.32362.1	chr7	-	988	1	Intergenic	novelGene_26419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATTTGCATGCAAATCT	NA	False	NA	NA	False	ATTAAA	-14	NA	144690964	144689976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144690000_144691000
ES.32363.1	chr7	-	175	1	Intergenic	novelGene_26420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAGGGGAGTTTATCC	NA	False	NA	NA	False	NA	NA	NA	144710470	144710295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144710300_144710500
ES.32364.1	chr7	-	5260	6	NNC	ENSMUSG00000048677.10	novel	2134	21	NA	NA	58273	7589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.489897948556636	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCATGAAAGTATATAAT	NA	False	NA	NA	False	AATACA	-18	NA	144754519	144732671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144737161_144737286_144737472_144739753_144739913_144740256_144740465_144750432_144750521_144754388
ES.32365.1	chr7	-	179	1	Intergenic	novelGene_26421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGACTCACCT	NA	False	NA	NA	False	NA	NA	NA	144758835	144758656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144758700_144758800
ES.32366.1	chr7	-	2354	1	Genic_Genomic	ENSMUSG00000109305.2	novel	NA	NA	NA	NA	-57	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGTGTGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	144761913	144759559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr7_-_144759600_144761900
ES.32366.2	chr7	-	2130	4	NNC	ENSMUSG00000109305.2	novel	889	3	NA	NA	-1081	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGTGTGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	144762937	144759559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144760319_144760665_144760743_144761039_144761159_144761762
ES.32367.1	chr7	-	4724	1	Intergenic	novelGene_26422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCCTGCGTGCATT	NA	False	NA	NA	False	GATAAA	-17	NA	144805577	144800853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_-_144800900_144805600
ES.32368.1	chr7	-	4606	20	NIC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-2	0	intron_retention	FALSE	canonical	2	3	junction_18	5.56203992152543	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837661	144807794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144833965_144834031_144837587
ES.32368.10	chr7	-	2930	27	NNC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.55646058551544	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837664	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144808436_144809187_144809271_144809377_144809416_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815297_144815417_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.11	chr7	-	3572	24	NIC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	37	-1	intron_retention	FALSE	canonical	3	14	junction_3	5.00396817960837	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837711	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.12	chr7	-	6678	23	NNC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-24	-1	intron_retention	FALSE	canonical	1	1	junction_17	7.39778836729416	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837692	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144826370_144826530_144827598_144827706_144830845_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.13	chr7	-	1410	10	ISM	ENSMUSG00000048677.10	ENSMUST00000208841.2	2852	24	-5	13522	4	-6036	5prime_fragment	FALSE	canonical	3	17	junction_5	5.4997194092287	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTCCCCTCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	144837664	144821322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr7_-_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.2	chr7	-	5208	24	NNC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_11	8.18962412380599	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837694	144807794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820476_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144826370_144826530_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.3	chr7	-	3518	24	NIC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	14	junction_4	4.85206482657491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837676	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.4	chr7	-	2625	3	NIC	ENSMUSG00000048677.10	novel	1658	8	NA	NA	1260	-1	intron_retention	FALSE	canonical	3	18	junction_1	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144811532	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144808436_144809187_144810549_144810908
ES.32368.6	chr7	-	2721	24	NIC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	6.01667500134698	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837662	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.7	chr7	-	2792	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	65	136	-15	-1	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837683	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32368.9	chr7	-	2829	24	NNC	ENSMUSG00000048677.10	novel	2993	25	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.19147050509961	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACCTCTTTCTACTT	NA	False	NA	0	True	TATAAA	-17	NA	144837661	144807795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820476_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827777_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ES.32369.1	chr7	+	159	1	Intergenic	novelGene_26423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	144851642	144851801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr7_+_144851600_144851800
ES.3237.1	chr10	-	195	1	Intergenic	novelGene_2534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTACT	NA	False	NA	NA	False	NA	NA	NA	78338967	78338772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78338800_78339000
ES.32370.1	chr8	+	2160	1	Intergenic	novelGene_26425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATTAGTTTGTTAAAC	5617	False	NA	NA	False	NA	NA	NA	3317487	3319647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3317500_3319600
ES.32371.1	chr8	+	179	1	Intergenic	novelGene_26426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTAAGAGTCCTGATT	7933	False	NA	NA	False	NA	NA	NA	3319803	3319982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3319800_3320000
ES.32372.1	chr8	-	5367	3	ISM	ENSMUSG00000005534.11	ENSMUST00000091291.5	9355	21	120034	1	-28	-1	3prime_fragment	FALSE	canonical	1	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGTGTAGTATACAG	NA	False	NA	0	True	AATAAA	-14	NA	3209583	3200922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_3206024_3208695_3208831_3209452
ES.32372.2	chr8	-	1585	1	NIC	ENSMUSG00000005534.11	novel	551	4	NA	NA	4734	-2315	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTTTTTTTCCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	3204821	3203236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3203200_3204800
ES.32372.3	chr8	-	3688	18	NIC	ENSMUSG00000005534.11	novel	9355	21	NA	NA	-10296	-4070	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	12.5441779875799	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTGCTTTCATATTT	5793	False	NA	NA	False	NA	NA	NA	3253013	3204991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3206024_3208695_3208831_3209452_3209583_3211338_3211499_3211680_3211792_3213236_3213482_3215517_3215586_3217501_3217605_3219708_3219869_3223479_3223620_3224613_3224889_3231701_3231738_3234950_3235153_3239124_3239293_3242545_3242803_3244794_3244922_3248060_3248276_3252889
ES.32372.5	chr8	-	4955	22	NIC	ENSMUSG00000005534.11	novel	9355	21	NA	NA	21	-4415	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.1920966618029	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTTCTTCTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	3329596	3205336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3206024_3208695_3208831_3209452_3209583_3211338_3211499_3211680_3211792_3213236_3213482_3215517_3215586_3217501_3217605_3219708_3219869_3223479_3223620_3224613_3224889_3231701_3231738_3234950_3235153_3239124_3239293_3242545_3242803_3244794_3244922_3248060_3248276_3252889_3253035_3254629_3254779_3261378_3261701_3308382_3308935_3329028
ES.32372.6	chr8	-	8554	10	ISM	ENSMUSG00000005534.11	ENSMUST00000091291.5	9355	21	30	28171	30	-1260	5prime_fragment	FALSE	canonical	1	1	junction_4	21.7204460768599	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAGTAAAAACTG	NA	False	NA	NA	False	AATGAA	-3	NA	3329587	3229092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_3235153_3239124_3239293_3242545_3242803_3244794_3244922_3248060_3248276_3252889_3253035_3254629_3254779_3261378_3261701_3308382_3308935_3329028
ES.32372.7	chr8	-	5087	12	NNC	ENSMUSG00000005534.11	novel	1675	3	NA	NA	8	-1343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.8855022014933	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTTACTGAGCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	3329543	3229175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3231575_3231701_3231738_3234950_3235153_3239124_3239293_3242545_3242803_3244794_3244922_3248060_3248276_3252889_3253035_3254629_3254779_3261378_3261701_3308382_3308935_3329028
ES.32372.8	chr8	-	5937	1	Intergenic	novelGene_26424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-30	NA	3299949	3294012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3294000_3299900
ES.32373.1	chr8	-	130	1	Intergenic	novelGene_26427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3387854	3387724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3387700_3387900
ES.32374.1	chr8	+	6599	29	NNC	ENSMUSG00000004568.14	novel	6574	29	NA	NA	-9	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	133.860458870346	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAAACAGACCTTCTT	NA	False	NA	28	True	AATAAA	-18	NA	3403450	3506605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3403731_3414627_3414764_3430257_3430521_3431832_3431981_3434896_3435009_3436359_3436418_3436921_3436967_3437633_3437712_3438000_3438104_3438276_3438419_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.10	chr8	+	5292	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	83.6439161513931	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443007	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494921_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.11	chr8	+	2830	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	1772	intron_retention	FALSE	canonical	3	218	junction_1	25.9508937974955	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCATAGCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	3443007	3502412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501679_3501814
ES.32374.12	chr8	+	3704	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-29	1596	3	465	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCCAGAGTCCAGCGA	NA	False	NA	NA	False	ATTAAA	-30	NA	3443008	3505005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.13	chr8	+	7364	18	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	10	0	intron_retention	FALSE	canonical	3	218	junction_1	25.78752682582	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443015	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.14	chr8	+	3505	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-19	1785	13	276	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGCTCAAAGTTCTT	NA	False	NA	47	True	NA	NA	NA	3443018	3504816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.15	chr8	+	4642	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	72.4405043236632	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443018	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.16	chr8	+	5281	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	65.4211584874445	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443018	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487094_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.17	chr8	+	3719	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	14	467	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	61.0774450483058	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCAGAGTCCAGCGAAT	NA	False	NA	NA	False	ATTAAA	-32	NA	3443019	3505007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.18	chr8	+	5864	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	15	0	intron_retention	FALSE	canonical	3	218	junction_1	25.892703581616	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443020	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.2	chr8	+	5634	22	NNC	ENSMUSG00000004568.14	novel	6574	29	NA	NA	-5473	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.949429665373	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTGAAACAGACCTTC	NA	False	NA	26	True	AATAAA	-16	NA	3437532	3506603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3437712_3438000_3438104_3438276_3438419_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3496999_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.20	chr8	+	5627	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	218	junction_1	26.1147160632033	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443022	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.21	chr8	+	5035	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	67.1230673676308	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTGAAACAGACCTTC	NA	False	NA	26	True	AATAAA	-16	NA	3443023	3506603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.23	chr8	+	5377	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	81.8694692788466	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGCTGAAACAGACCTT	NA	False	NA	25	True	AATAAA	-15	NA	3443023	3506602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.24	chr8	+	5140	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	66.294353892505	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443027	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.25	chr8	+	6106	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	64.2350255246709	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443027	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484045_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.26	chr8	+	5433	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	95.1546539233122	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443028	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.27	chr8	+	10290	13	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	78.6601339095394	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443032	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3483361_3484713_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3501679_3501814
ES.32374.28	chr8	+	6194	18	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-4	0	intron_retention	FALSE	canonical	3	218	junction_1	26.5236070341838	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443033	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.29	chr8	+	3226	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-3	2048	-3	13	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACCCCTTTCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	3443034	3504553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.3	chr8	+	5346	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-62	-13	-30	13	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTCTTTGGGGATTG	NA	False	NA	37	True	AATAAA	-27	NA	3442975	3506614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.31	chr8	+	5337	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.7517014752536	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTGAAACAGACCTTC	NA	False	NA	26	True	AATAAA	-16	NA	3443035	3506603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.33	chr8	+	4328	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-1	267	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	82.6787662786026	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATATATGCTC	NA	False	NA	38	True	NA	NA	NA	3443036	3504807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484045_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.34	chr8	+	6810	18	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-1	0	intron_retention	FALSE	canonical	3	218	junction_1	26.5508586845287	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443036	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3504285_3504371
ES.32374.35	chr8	+	3362	19	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-1	269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.9675685331752	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTATATATGCTCAA	NA	False	NA	40	True	NA	NA	NA	3443036	3504809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.36	chr8	+	5467	9	Fusion	ENSMUSG00000004568.14_ENSMUSG00000108955.2	novel	5271	20	NA	NA	-1	-1069	multi-exon	FALSE	canonical	0	0	junction_4	91.4999146174465	514	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAAAGGCACAATCT	NA	False	NA	NA	False	AATAAA	-15	NA	3443036	3508425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479612_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.38	chr8	+	5484	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	83.1726367262695	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443225_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.39	chr8	+	4305	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	269	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	64.2350255246709	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTATATATGCTCAA	NA	False	NA	40	True	NA	NA	NA	3443037	3504809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484045_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.4	chr8	+	5359	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	61.0774450483058	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCTGAAACAGACCTTC	NA	False	NA	26	True	AATAAA	-16	NA	3442975	3506603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.40	chr8	+	5118	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	0	153	0	-152	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCATTCAATCTCCCT	NA	False	NA	NA	False	NA	NA	NA	3443037	3506448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.41	chr8	+	3604	20	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	272	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	63.6920830279809	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATATATGCTCAAAGT	NA	False	NA	43	True	NA	NA	NA	3443037	3504812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.42	chr8	+	8342	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	70.5626908028126	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443037	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3500915_3501490_3501679_3501814_3502286_3503037_3504285_3504371
ES.32374.43	chr8	+	5523	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.8789339658218	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443037	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3450267_3450372_3451105_3451257_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.44	chr8	+	3573	19	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	0	1785	0	276	intron_retention	FALSE	canonical	3	218	junction_1	24.1918770164749	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGCTCAAAGTTCTT	NA	False	NA	47	True	NA	NA	NA	3443037	3504816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158
ES.32374.45	chr8	+	6372	16	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	218	junction_1	23.9838834775911	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443037	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3502286_3503037
ES.32374.46	chr8	+	5341	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	83.4888465604838	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCTCAGGCTGAAACAG	NA	False	NA	20	True	AATAAA	-10	NA	3443037	3506597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484045_3484120_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.47	chr8	+	5386	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	95.2715067583168	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.48	chr8	+	2709	17	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	1750	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	65.4947516981323	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACATCA	NA	False	NA	NA	False	NA	NA	NA	3443038	3502390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814
ES.32374.49	chr8	+	5405	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	218	junction_1	24.1104070557729	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443038	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.5	chr8	+	5392	19	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-35	1	-3	0	intron_retention	FALSE	canonical	3	218	junction_1	24.1918770164749	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443002	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158
ES.32374.50	chr8	+	5544	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	96.1735251447898	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443038	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443225_3475294_3475386_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.51	chr8	+	5542	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.6173002405536	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443038	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3443868_3444144_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.52	chr8	+	10935	13	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	1	intron_retention	FALSE	canonical	3	218	junction_1	25.9822321767951	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGCTGAAACAGACCTT	NA	False	NA	25	True	AATAAA	-15	NA	3443038	3506602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3502286_3503037_3504285_3504371
ES.32374.53	chr8	+	2707	17	ISM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	1	4189	1	1772	5prime_fragment	FALSE	canonical	3	218	junction_1	25.2904996985034	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCATAGCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	3443038	3502412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814
ES.32374.54	chr8	+	5094	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	65.3865980321355	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443038	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503189_3504150_3504285_3504371
ES.32374.57	chr8	+	5235	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	65.0888589298253	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAGGCTGAAACAGAC	NA	False	NA	22	True	AATAAA	-12	NA	3443038	3506599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494921_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.58	chr8	+	3591	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	229	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	95.1546539233122	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTGTGTATATA	NA	False	NA	0	True	AAAACA	-44	NA	3443038	3504769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.59	chr8	+	4774	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	-519	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	61.0774450483058	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCAGTGTTTTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	3443038	3506081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.6	chr8	+	5476	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	105.1659093087	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443006	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.60	chr8	+	5326	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	65.3736755240483	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443038	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498326_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.62	chr8	+	4921	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	63.9197934915312	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443038	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371_3506213_3506561
ES.32374.63	chr8	+	6672	19	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_5	65.5219546656682	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443038	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484045_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.64	chr8	+	7915	17	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	218	junction_1	26.1235047418986	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443039	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.65	chr8	+	4943	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	-349	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	61.0774450483058	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACACCATGACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3443039	3506251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.66	chr8	+	3655	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.6173002405536	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTCAAAGTTCTTTT	NA	False	NA	49	True	NA	NA	NA	3443039	3504818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3443868_3444038_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.67	chr8	+	5254	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	64.3469215719717	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCTCAGGCTGAAACAG	NA	False	NA	20	True	AATAAA	-10	NA	3443039	3506597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477480_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.69	chr8	+	7124	20	Fusion	ENSMUSG00000004568.14_ENSMUSG00000108955.2	novel	5271	20	NA	NA	4	-1060	multi-exon	FALSE	canonical	3	22	junction_15	61.0774450483058	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACAATCTACCATGGTC	NA	False	NA	NA	False	AATAAA	-24	NA	3443041	3508434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.70	chr8	+	3822	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	4	463	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	95.1546539233122	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCACCCAGAGTCCAGC	NA	False	NA	NA	False	ATTAAA	-28	NA	3443041	3505003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.71	chr8	+	5347	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.8138807196571	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443046	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501606_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.73	chr8	+	7258	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	14	0	intron_retention	FALSE	canonical	3	218	junction_1	26.0362994469047	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443051	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.74	chr8	+	6824	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	16	-2	intron_retention	FALSE	canonical	3	8	junction_2	83.8170742692572	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443053	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.75	chr8	+	4068	22	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	96.635110964917	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTCAGGCTGAAACAGA	NA	False	NA	21	True	AATAAA	-11	NA	3443058	3506598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443225_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371_3504848_3506239
ES.32374.76	chr8	+	5226	20	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	64.3645693214327	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443073	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495060_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.77	chr8	+	5379	20	NNC	ENSMUSG00000004568.14	novel	3794	19	NA	NA	7764	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.9479228842664	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3450836	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3451010_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.78	chr8	+	7015	1	NIC	ENSMUSG00000004568.14	novel	6574	29	NA	NA	-2001	2074	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAGAAAAAAAA	3849	False	NA	NA	False	NA	NA	NA	3474698	3481713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3474700_3481700
ES.32374.79	chr8	+	3549	21	NNC	ENSMUSG00000004568.14	novel	3794	19	NA	NA	-1360	265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.8981525422342	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTATGTGTATATATGC	4490	False	NA	36	True	NA	NA	NA	3475339	3504805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3475386_3476466_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.8	chr8	+	5422	20	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	63.6920830279809	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	NA	False	NA	23	True	AATAAA	-13	NA	3443007	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.80	chr8	+	4790	18	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	2561	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	68.2606443782525	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	8411	False	NA	24	True	AATAAA	-14	NA	3479260	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503127_3504158_3504285_3504371
ES.32374.81	chr8	+	4818	16	ISM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	5911	-2061	-4400	0	3prime_fragment	FALSE	canonical	3	228	junction_15	22.9546412639265	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	118	False	NA	24	True	AATAAA	-14	NA	3482610	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.82	chr8	+	2359	3	NNC	ENSMUSG00000004568.14	novel	3843	12	NA	NA	-4254	6602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	264	False	NA	NA	False	NA	NA	NA	3482756	3486241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3483637_3484704_3485918_3485975
ES.32374.83	chr8	+	5603	11	NIC	ENSMUSG00000004568.14	novel	3794	19	NA	NA	2527	0	intron_retention	FALSE	canonical	1	1	junction_4	85.9244435536245	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	3805	False	NA	23	True	AATAAA	-13	NA	3489537	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.84	chr8	+	3901	9	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	-3758	0	intron_retention	FALSE	canonical	3	228	junction_8	25.4947911346612	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	3772	False	NA	24	True	AATAAA	-14	NA	3496999	3506601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.86	chr8	+	3834	2	NIC	ENSMUSG00000004568.14	novel	1168	6	NA	NA	-2034	-1575	intron_retention	FALSE	canonical	3	313	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGAGTAGTCAGATAT	5496	False	NA	NA	False	NA	NA	NA	3498723	3502693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3501679_3501814
ES.32374.87	chr8	+	3548	1	NIC	ENSMUSG00000004568.14	novel	6574	29	NA	NA	-1635	-1598	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	5895	False	NA	NA	False	NA	NA	NA	3499122	3502670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3499100_3502700
ES.32374.89	chr8	+	3983	5	NIC	ENSMUSG00000004568.14	novel	3794	19	NA	NA	142	0	intron_retention	FALSE	canonical	3	228	junction_4	22.8199474144881	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGGCTGAAACAGACC	360	False	NA	23	True	AATAAA	-13	NA	3500899	3506600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3501539_3501630_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.9	chr8	+	4782	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	-30	519	2	-518	multi-exon	FALSE	canonical	3	218	junction_1	25.5526180280738	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGTGTTTTGTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	3443007	3506082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.90	chr8	+	1451	5	ISM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	24905	-277	847	277	3prime_fragment	FALSE	canonical	3	228	junction_4	30.8980177357707	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGCTCAAAGTTCTTT	1065	False	NA	48	True	NA	NA	NA	3501604	3504817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ES.32374.91	chr8	+	4370	4	ISM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	25312	-3467	1254	1406	3prime_fragment	FALSE	canonical	3	228	junction_3	26.2466929133727	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGGACTTTGGCCAA	1472	False	NA	NA	False	NA	NA	NA	3502011	3508007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3502286_3503037_3503372_3504158_3504285_3504371
ES.32375.1	chr8	-	6509	1	Intergenic	novelGene_26428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3456768	3450259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3450300_3456800
ES.32375.2	chr8	-	956	1	Intergenic	novelGene_26429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	3456768	3455812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3455800_3456800
ES.32376.1	chr8	-	5331	1	Intergenic	novelGene_26430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGGTCAGGAAGC	1264	False	NA	NA	False	AATAAA	-15	NA	3466446	3461115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3461100_3466400
ES.32377.1	chr8	-	652	1	Antisense	novelGene_ENSMUSG00000004568.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	3477566	3476914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_3476900_3477600
ES.32378.1	chr8	-	4717	12	Antisense	novelGene_ENSMUSG00000004568.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAACAAAAATTGTCCT	NA	False	NA	NA	False	NA	NA	NA	3504341	3484613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_3484996_3486979_3487098_3489484_3489737_3491217_3491296_3494887_3495066_3496999_3497089_3498380_3500915_3501490_3501537_3501628_3501683_3501816_3502284_3503035_3503369_3504155
ES.32379.1	chr8	-	3027	5	NNC	ENSMUSG00000069633.13	novel	2870	5	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	11.1887220003001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	3517647	3507104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517381
ES.32379.2	chr8	-	2837	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	33	0	-2	0	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	3517647	3507104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
ES.32379.3	chr8	-	1125	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	33	1712	-2	-1709	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGTGCATGAGGTG	NA	False	NA	-2	True	ATTAAA	-16	NA	3517647	3508816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
ES.32379.4	chr8	-	935	4	ISM	ENSMUSG00000069633.13	ENSMUST00000111081.10	666	5	-2	1710	-2	-1710	5prime_fragment	FALSE	canonical	0	0	junction_3	10.9645894689324	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTGCATGAGGT	NA	False	NA	-3	True	ATTAAA	-15	NA	3517647	3508817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_3509435_3510271_3510335_3513921_3514101_3517571
ES.3238.1	chr10	+	2334	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5295	False	NA	28	True	AATAAA	-37	NA	78410229	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.10	chr10	+	4534	11	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	22	0	intron_retention	FALSE	canonical	3	14	junction_1	45.8830033890546	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAAGGACTCAGTCACA	5421	False	NA	7	True	AATAAA	-16	NA	78410355	78420313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78419369_78419463
ES.3238.11	chr10	+	2477	9	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	22	-173	intron_retention	FALSE	canonical	3	23	junction_1	47.7098980820542	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACAGGGAGGCAGGGG	5421	False	NA	NA	False	NA	NA	NA	78410355	78417909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889
ES.3238.12	chr10	+	2218	16	NNC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	141	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	55.1621448297854	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCAAGGACTCAGTCA	5627	False	NA	5	True	AATAAA	-14	NA	78410561	78420311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412879_78412988_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.13	chr10	+	2265	15	NNC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	189	-2	intron_retention	FALSE	canonical	1	2	junction_4	56.8000431158215	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5675	False	NA	26	True	AATAAA	-35	NA	78410609	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412879_78412988_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.14	chr10	+	2776	10	ISM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	-2	-8	-1	0	intron_retention	FALSE	canonical	3	132	junction_8	18.8921565800973	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5892	False	NA	28	True	AATAAA	-37	NA	78410826	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848
ES.3238.15	chr10	+	2515	8	NIC	ENSMUSG00000032763.12	novel	2331	14	NA	NA	0	-173	intron_retention	FALSE	canonical	3	132	junction_7	19.6208968153022	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACAGGGAGGCAGGGG	5894	False	NA	NA	False	NA	NA	NA	78410828	78417909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78415395_78415499_78415637_78416889
ES.3238.16	chr10	+	2368	13	NNC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	7	junction_3	45.9754614501644	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAAGGACTCAGTCACA	5895	False	NA	7	True	AATAAA	-16	NA	78410829	78420313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412988_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419536_78419711
ES.3238.17	chr10	+	2206	15	NNC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	44.8967068470983	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5895	False	NA	26	True	AATAAA	-35	NA	78410829	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412988_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.18	chr10	+	1848	9	FSM	ENSMUSG00000032763.12	ENSMUST00000220430.2	2350	9	14	488	10	1	multi-exon	FALSE	canonical	3	132	junction_8	18.9402844487616	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGGTAGTGTATATTT	5904	False	NA	NA	False	AATAAA	-16	NA	78410838	78417594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889
ES.3238.2	chr10	+	2388	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	-61	2	-37	0	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5338	False	NA	28	True	AATAAA	-37	NA	78410272	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.20	chr10	+	2184	15	NNC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	46.2727605330278	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCAAGGACTCAGTCAC	5920	False	NA	6	True	AATAAA	-15	NA	78410854	78420312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419318_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.21	chr10	+	2485	13	ISM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	28	-6	0	-2	intron_retention	FALSE	canonical	3	132	junction_8	16.8644514355559	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5922	False	NA	26	True	AATAAA	-35	NA	78410856	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463
ES.3238.22	chr10	+	3741	12	NIC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	141	junction_3	19.563839133792	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5930	False	NA	28	True	AATAAA	-37	NA	78410864	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78417025_78418848_78418964_78419053_78419224_78419297_78419818_78419903
ES.3238.23	chr10	+	2298	14	NIC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	8	-2	intron_retention	FALSE	canonical	3	132	junction_7	19.5108830198179	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5930	False	NA	26	True	AATAAA	-35	NA	78410864	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.24	chr10	+	2394	13	NIC	ENSMUSG00000032763.12	novel	2331	14	NA	NA	10	-2	intron_retention	FALSE	canonical	3	132	junction_8	17.7738493923579	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5932	False	NA	26	True	AATAAA	-35	NA	78410866	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419536_78419711
ES.3238.25	chr10	+	2270	14	FSM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	39	22	11	-9	multi-exon	FALSE	canonical	3	132	junction_8	17.1491887433841	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATATGAGCCCAAGGAC	5933	False	NA	-2	True	AATAAA	-7	NA	78410867	78420304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711
ES.3238.26	chr10	+	3917	5	NIC	ENSMUSG00000032763.12	novel	2350	9	NA	NA	11	-173	intron_retention	FALSE	canonical	3	143	junction_4	19.0328663106743	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAACAGGGAGGCAGGGG	5933	False	NA	NA	False	NA	NA	NA	78410867	78417909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78413084_78413175_78413288_78414854
ES.3238.27	chr10	+	4979	4	ISM	ENSMUSG00000032763.12	ENSMUST00000219588.2	1952	9	-1909	2740	17	1	intron_retention	FALSE	canonical	3	141	junction_1	7.58653778449403	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGGTAGTGTATATTT	5939	False	NA	NA	False	AATAAA	-16	NA	78410873	78417594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_78412862_78412944_78413084_78413175_78413288_78414854
ES.3238.3	chr10	+	2742	13	ISM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	-60	4	-36	-2	intron_retention	FALSE	canonical	3	14	junction_1	43.2418103999667	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5339	False	NA	26	True	AATAAA	-35	NA	78410273	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297
ES.3238.4	chr10	+	2472	15	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	14	junction_1	43.2706244324658	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTATACTGGTT	5347	False	NA	26	True	AATAAA	-35	NA	78410281	78420332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419536_78419711_78419818_78419903
ES.3238.5	chr10	+	2790	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	-536	-21	-18	0	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5357	False	NA	28	True	AATAAA	-37	NA	78410291	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.7	chr10	+	2874	14	NIC	ENSMUSG00000032763.12	novel	2233	15	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	132	junction_8	20.5521417994422	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGTGTATACTGGT	5365	False	NA	25	True	AATAAA	-34	NA	78410299	78420331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419536_78419711_78419818_78419903
ES.3238.8	chr10	+	2521	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	39.9503024602651	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5376	False	NA	30	True	AATAAA	-39	NA	78410310	78420336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410669_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ES.3238.9	chr10	+	2305	15	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	11	0	intron_retention	FALSE	canonical	3	14	junction_1	41.1989325203497	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGTATACTGGTTTA	5410	False	NA	28	True	AATAAA	-37	NA	78410344	78420334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711
ES.32380.1	chr8	+	164	1	Intergenic	novelGene_26431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATAAAACTTT	3072	False	NA	NA	False	NA	NA	NA	3520017	3520181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3520000_3520200
ES.32381.1	chr8	-	160	1	Intergenic	novelGene_26432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAGTAAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	3535190	3535030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3535000_3535200
ES.32382.1	chr8	+	180	1	Intergenic	novelGene_26433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGAGAGAGAGAGAGA	2380	False	NA	NA	False	NA	NA	NA	3539201	3539381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3539200_3539400
ES.32383.1	chr8	+	176	1	Intergenic	novelGene_26434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTTATG	3655	False	NA	NA	False	NA	NA	NA	3540476	3540652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3540500_3540700
ES.32384.1	chr8	+	175	1	Intergenic	novelGene_26435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAGGTGGAGGC	4067	False	NA	NA	False	NA	NA	NA	3540888	3541063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3540900_3541100
ES.32385.1	chr8	+	2014	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	-2	-13	-2	13	multi-exon	FALSE	canonical	3	37	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTGTTTCAGTTTCT	6314	False	NA	29	True	AGTAAA	-30	NA	3543135	3547221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3543310_3545381
ES.32385.2	chr8	+	4053	1	FSM	ENSMUSG00000047264.9	ENSMUST00000208423.2	2200	1	-1853	0	-14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6334	False	NA	16	True	AGTAAA	-17	NA	3543155	3547208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3543200_3547200
ES.32386.1	chr8	+	2110	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	-27	-18	-27	18	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGGCAGCCCTTT	NA	False	NA	30	True	AATAAA	-31	NA	3550429	3565250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.10	chr8	+	2060	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	90.7944554259492	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550484	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.100	chr8	+	4142	32	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	76	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.4782867369101	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566949	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567002_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593174_3593953
ES.32386.102	chr8	+	4092	31	NNC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	176	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9311782744191	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3567401	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567472_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.103	chr8	+	4997	23	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-2226	-2	intron_retention	FALSE	canonical	1	71	junction_18	50.2898211937811	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	3593	False	NA	14	True	AATAAA	-18	NA	3571575	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.104	chr8	+	4206	25	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-2154	0	intron_retention	FALSE	canonical	1	71	junction_20	48.7971282169578	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	3665	False	NA	10	True	AATAAA	-14	NA	3571647	3594260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.105	chr8	+	1426	5	ISM	ENSMUSG00000004565.16	ENSMUST00000208851.2	5743	27	5995	15110	-944	53	internal_fragment	FALSE	canonical	3	152	junction_3	26.0516314268416	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGAGTGTGTGT	4875	False	NA	NA	False	NA	NA	NA	3572857	3575260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251
ES.32386.106	chr8	+	3646	23	NIC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	-911	2	intron_retention	FALSE	canonical	1	71	junction_18	57.5036649927925	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	4908	False	NA	12	True	AATAAA	-16	NA	3572890	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.107	chr8	+	3284	22	NIC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	-533	2	intron_retention	FALSE	canonical	1	71	junction_17	48.0084081826905	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	5286	False	NA	12	True	AATAAA	-16	NA	3573268	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3573342_3573757_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.108	chr8	+	3482	22	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-441	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.7751718765987	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	5378	False	NA	11	True	AATAAA	-15	NA	3573360	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591611_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.11	chr8	+	910	5	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-9	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	159.251373620449	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCGGTGGTCTAATTT	NA	False	NA	8	True	AATAAA	-9	NA	3550485	3565228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3562649_3562866_3564782_3564914_3565013
ES.32386.110	chr8	+	6631	14	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	-3803	-2	intron_retention	FALSE	canonical	3	8	junction_10	69.8762219251481	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3581747	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587766_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.111	chr8	+	7785	6	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	-490	2	intron_retention	FALSE	canonical	3	261	junction_1	12.0099958368019	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3585060	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3586662_3586862_3587020_3587248_3587366_3587450_3592942_3593066_3593177_3593953
ES.32386.112	chr8	+	1577	11	NNC	ENSMUSG00000004565.16	novel	672	6	NA	NA	-276	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	97.8756864599171	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3586278	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3586339_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.113	chr8	+	283	1	Intergenic	novelGene_26436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATCCTTTTGATTAAT	373	False	NA	NA	False	NA	NA	NA	3596895	3597178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3596900_3597200
ES.32386.12	chr8	+	6786	49	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4444	35	NA	NA	-9	0	multi-exon	FALSE	canonical	0	0	junction_21	105.340049561725	665	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3550485	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3571918_3572004_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.13	chr8	+	8716	46	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4496	35	NA	NA	2	0	intron_retention	FALSE	canonical	1	5	junction_12	95.7669599459226	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3550496	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.14	chr8	+	4140	11	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_1	106.561953810917	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCGGTGGTCTAATTT	NA	False	NA	8	True	AATAAA	-9	NA	3550499	3565228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555745_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.15	chr8	+	1991	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	95.6774660763594	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550499	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558711_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.16	chr8	+	4121	13	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_2	148.759500163482	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550499	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3556948_3557005_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.17	chr8	+	3955	13	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-2	18	intron_retention	FALSE	canonical	3	278	junction_8	30.7366728120588	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGGCAGCCCTTT	NA	False	NA	30	True	AATAAA	-31	NA	3550501	3565250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.18	chr8	+	4360	13	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	129.501823238988	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550502	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3550836_3551164_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.19	chr8	+	3962	13	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	23	junction_8	94.1389339693673	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550502	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.2	chr8	+	1849	13	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	95.4507944789705	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550463	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.20	chr8	+	1909	13	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	101.003162766761	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCGGTGGTCTAATTT	NA	False	NA	8	True	AATAAA	-9	NA	3550506	3565228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.21	chr8	+	4054	12	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	23	junction_8	97.521432270379	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550507	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.22	chr8	+	5036	9	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	338	junction_8	19.9185842870421	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550508	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3561811_3562649
ES.32386.23	chr8	+	4270	10	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	5	3	intron_retention	FALSE	canonical	3	311	junction_8	24.3857882108958	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	15	True	AATAAA	-16	NA	3550508	3565235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560916_3561687_3561811_3562649
ES.32386.24	chr8	+	2800	13	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	14	junction_12	96.5370898785654	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550508	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3563556_3564782
ES.32386.25	chr8	+	8276	4	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	5	-25	intron_retention	FALSE	canonical	3	366	junction_3	11.0855260988773	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGCGGCTGTTAAATAA	NA	False	NA	-21	True	NA	NA	NA	3550508	3565199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3564914_3565013
ES.32386.26	chr8	+	3943	11	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	5	0	intron_retention	FALSE	canonical	2	5	junction_6	108.179526713699	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550508	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3560319_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.27	chr8	+	2550	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	126.086051201916	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550509	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562798_3563556_3564782_3564914_3565013
ES.32386.28	chr8	+	1999	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	96.8491781772539	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGCGGTGGTCTAAT	NA	False	NA	6	True	AATAAA	-7	NA	3550509	3565226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564907_3565013
ES.32386.29	chr8	+	4049	11	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	7	18	intron_retention	FALSE	canonical	0	0	junction_4	108.940534237721	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGGCAGCCCTTT	NA	False	NA	30	True	AATAAA	-31	NA	3550510	3565250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557433_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.3	chr8	+	4092	12	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	8	-18	8	18	intron_retention	FALSE	canonical	3	278	junction_8	31.5654901005712	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGGCAGCCCTTT	NA	False	NA	30	True	AATAAA	-31	NA	3550464	3565250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.30	chr8	+	4387	10	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	7	10	intron_retention	FALSE	canonical	3	14	junction_8	111.225274683388	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGTAACAGGTGAGGC	NA	False	NA	22	True	AATAAA	-23	NA	3550510	3565242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3560916_3561687_3561811_3562649_3563556_3564782_3564914_3565013
ES.32386.31	chr8	+	3430	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	10	-98	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	95.3964632840264	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTGCGTCTGACAG	NA	False	NA	-94	True	NA	NA	NA	3550513	3565126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3564394_3564782_3564914_3565013
ES.32386.32	chr8	+	3824	12	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	11	0	intron_retention	FALSE	canonical	2	5	junction_6	103.907380881499	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550514	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.33	chr8	+	4032	12	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	13	0	intron_retention	FALSE	canonical	3	311	junction_9	23.5105040705828	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550516	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.34	chr8	+	2775	13	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	278	junction_8	28.7455310536361	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550518	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.35	chr8	+	3827	13	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-15	-82	intron_retention	FALSE	canonical	0	0	junction_8	100.322916125878	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCCTTGTGAGGGCTTG	NA	False	NA	-78	True	TTTAAA	-14	NA	3550518	3565142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560542_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.36	chr8	+	1837	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.8121465311886	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550519	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557433_3558346_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.37	chr8	+	4234	30	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4496	35	NA	NA	-14	53	multi-exon	FALSE	canonical	2	3	junction_29	118.827025835731	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGAGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	3550519	3575260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3574947
ES.32386.38	chr8	+	6643	48	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4496	35	NA	NA	-14	0	multi-exon	FALSE	canonical	1	5	junction_14	92.239605712126	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	3550519	3594260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.39	chr8	+	2371	12	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-14	0	intron_retention	FALSE	canonical	3	311	junction_8	23.5171820429164	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550519	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558781_3559135_3559236_3560319_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.4	chr8	+	4182	11	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	16	3	intron_retention	FALSE	canonical	3	311	junction_9	24.3197450644533	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	15	True	AATAAA	-16	NA	3550472	3565235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.40	chr8	+	2201	15	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	123.671470651324	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCGGTGGTCTAATTT	NA	False	NA	8	True	AATAAA	-9	NA	3550520	3565228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564189_3564394_3564782_3564914_3565013
ES.32386.41	chr8	+	2750	13	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-13	0	intron_retention	FALSE	canonical	3	278	junction_7	30.2998899887992	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550520	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ES.32386.42	chr8	+	3987	12	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-13	0	intron_retention	FALSE	canonical	2	6	junction_5	102.343450294495	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550520	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558711_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649
ES.32386.44	chr8	+	2133	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_12	95.1431186042978	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	15	True	AATAAA	-16	NA	3550523	3565235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562998_3564782_3564914_3565013
ES.32386.45	chr8	+	7898	47	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4444	35	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_14	98.9942046383771	665	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	3550541	3594260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3563461_3563556_3564782_3564915_3565013_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.46	chr8	+	6110	7	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	338	junction_6	21.1298893092752	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550541	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3558428_3558683_3559236_3560319_3561811_3562649
ES.32386.48	chr8	+	2071	15	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	120.774139852631	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550541	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3563461_3563556_3564782_3564914_3565013
ES.32386.49	chr8	+	1218	9	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	6688	3330	1366	-882	internal_fragment	FALSE	canonical	3	278	junction_6	27.9988839063274	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AGTAAA	-13	NA	3557144	3561902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687
ES.32386.5	chr8	+	5725	9	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-17	3	intron_retention	FALSE	canonical	3	338	junction_7	19.8805023829882	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTCTAATTTGTAACAG	NA	False	NA	15	True	AATAAA	-16	NA	3550477	3565235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3558428_3558683_3558781_3559135_3559236_3560319_3561811_3562649_3564914_3565013
ES.32386.50	chr8	+	5612	39	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4496	35	NA	NA	163	0	multi-exon	FALSE	canonical	1	5	junction_5	86.683543441654	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3560829	3594266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587766_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.51	chr8	+	5276	38	Fusion	ENSMUSG00000004567.17_ENSMUSG00000004565.16	novel	4444	35	NA	NA	-12	0	multi-exon	FALSE	canonical	1	5	junction_4	85.4744674583585	662	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3562669	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3562866_3563461_3563556_3564782_3564914_3565013_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.52	chr8	+	4409	34	FSM	ENSMUSG00000004565.16	ENSMUST00000004681.14	4438	34	24	5	-3	2	multi-exon	FALSE	canonical	1	6	junction_1	67.8088925855767	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3565407	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.54	chr8	+	4394	34	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	64.3462568557788	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3565412	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.55	chr8	+	4453	35	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	78.0735446467139	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3565412	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587766_3587884_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.56	chr8	+	4771	35	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	2	2800	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	71.7000250949462	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	3565412	3597067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953_3594070_3596495
ES.32386.57	chr8	+	4842	36	NNC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	2	2800	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	79.5025143999758	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	3565412	3597067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953_3594070_3596495
ES.32386.58	chr8	+	4616	36	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	81.7443301410201	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3565412	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3590874_3591037_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.6	chr8	+	2154	13	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	21	-10	-17	10	intron_retention	FALSE	canonical	3	278	junction_8	30.3547314635169	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGTAACAGGTGAGGC	NA	False	NA	22	True	AATAAA	-23	NA	3550477	3565242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782
ES.32386.60	chr8	+	4369	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	71.0022905230217	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3565635	3594266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3565691_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.63	chr8	+	4301	34	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	3	-2	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	64.8287990511127	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3565639	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3565691_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.64	chr8	+	4371	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	73.8902264912908	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3565641	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3565691_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.66	chr8	+	1970	17	NNC	ENSMUSG00000004565.16	novel	5743	27	NA	NA	274	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.4189700245152	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATAGAGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	3565910	3575260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3565970_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3574947
ES.32386.67	chr8	+	4345	35	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	298	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.4991712391778	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3565934	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3565970_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.68	chr8	+	4420	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1416	0	-22	0	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566840	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.69	chr8	+	4298	31	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_16	59.3483969642165	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566845	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.7	chr8	+	5681	7	NIC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-17	0	intron_retention	FALSE	canonical	3	338	junction_6	20.8599829551438	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550477	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3559236_3560319_3561811_3562649
ES.32386.70	chr8	+	4404	32	NNC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	61.3672691861657	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3566845	3594266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567143_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.72	chr8	+	4418	32	ISM	ENSMUSG00000004565.16	ENSMUST00000111070.4	4496	35	1470	0	-9	0	3prime_fragment	FALSE	canonical	1	71	junction_27	50.3064283424121	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3566853	3594266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.74	chr8	+	4401	32	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	2	8	junction_26	58.4351611113574	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3566854	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587766_3587884_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.75	chr8	+	4772	33	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	0	2800	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_32	57.0968116311016	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	3566862	3597067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953_3594070_3596495
ES.32386.76	chr8	+	5616	28	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	0	1	intron_retention	FALSE	canonical	1	71	junction_24	43.7749576079777	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3566862	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.78	chr8	+	4956	29	NIC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	4	-2	intron_retention	FALSE	canonical	1	71	junction_24	52.7751294239463	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566866	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.79	chr8	+	4370	32	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	56.946878143415	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGGTGCTGTCTTTGG	NA	False	NA	15	True	AATAAA	-19	NA	3566866	3594265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567143_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.8	chr8	+	3878	12	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-11	0	intron_retention	TRUE	canonical	2	5	junction_6	134.211070967517	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550483	3565229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3564914_3565013
ES.32386.81	chr8	+	4299	33	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	57.0968116311016	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3566880	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567002_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.82	chr8	+	4241	31	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	60.0761091357362	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3566882	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.83	chr8	+	4311	33	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	61.3103975174684	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566883	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567002_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.84	chr8	+	4336	32	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	59.0149101955618	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566892	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572787_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.85	chr8	+	7627	30	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	20	0	intron_retention	FALSE	canonical	3	15	junction_1	51.9501956682006	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566893	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567143_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.86	chr8	+	9120	27	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	29	1	intron_retention	FALSE	canonical	3	152	junction_11	34.319677106383	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3566902	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.88	chr8	+	4972	31	NIC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	40	2	intron_retention	FALSE	canonical	1	8	junction_25	63.5340328747777	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3566913	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587766_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.89	chr8	+	4719	32	NNC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	59.0821928764366	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTGCTGTCTTTGGG	NA	False	NA	16	True	AATAAA	-20	NA	3566914	3594266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587693_3587766_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.9	chr8	+	4936	10	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	-11	0	intron_retention	FALSE	canonical	2	6	junction_5	113.399000583485	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550483	3565232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558711_3558781_3559135_3559236_3560319_3561811_3562649_3564914_3565013
ES.32386.90	chr8	+	4250	32	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	57.7531436229671	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGCCTGGTGCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	3566916	3594261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567077_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.92	chr8	+	5045	31	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	44	-2	intron_retention	FALSE	canonical	1	71	junction_27	42.3774704294629	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTGGTGCTGTCTTTG	NA	False	NA	14	True	AATAAA	-18	NA	3566917	3594264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.94	chr8	+	2841	20	ISM	ENSMUSG00000004565.16	ENSMUST00000208851.2	5743	27	61	5099	50	-1390	5prime_fragment	FALSE	canonical	3	152	junction_11	20.5120058080985	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATGCCTTTGCA	NA	False	NA	NA	False	NA	NA	NA	3566923	3585271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831
ES.32386.97	chr8	+	4309	32	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.354949638285	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566925	3594267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572285_3572403_3572601_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.98	chr8	+	4737	31	NIC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	71	0	intron_retention	FALSE	canonical	1	71	junction_26	51.137776860382	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	3566944	3594260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32386.99	chr8	+	4266	32	NNC	ENSMUSG00000004565.16	novel	4438	34	NA	NA	74	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.4260489362443	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	False	NA	12	True	AATAAA	-16	NA	3566947	3594262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581691_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ES.32387.1	chr8	+	178	1	Intergenic	novelGene_26437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAAT	736	False	NA	NA	False	NA	NA	NA	3603110	3603288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3603100_3603300
ES.32388.1	chr8	+	711	4	NNC	ENSMUSG00000065952.14	novel	1621	6	NA	NA	-27	-46	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	10.3387082795139	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAACCA	NA	False	NA	-22	True	ATTAAA	-6	NA	3617962	3628551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3618097_3623120_3623222_3627840_3628046_3628280
ES.32388.10	chr8	+	4582	23	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	4466	11	NA	NA	8	-9	multi-exon	FALSE	canonical	0	0	junction_5	61.2472465226933	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGACCAAGTTTACG	NA	False	NA	44	True	AATAAA	-40	NA	3618005	3659066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399_3630475_3635284_3635439_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.11	chr8	+	5690	13	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-192	-10	intron_retention	FALSE	canonical	0	0	junction_10	45.4626678349024	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCTGACCAAGTTTAC	6462	False	NA	43	True	AATAAA	-39	NA	3637601	3659065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3657790_3657891_3658188_3658302_3658393
ES.32388.14	chr8	+	4078	17	NNC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-181	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	40.7883255356235	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	6473	False	NA	52	True	NA	NA	NA	3637612	3659074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653656_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.15	chr8	+	5177	15	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-181	0	intron_retention	FALSE	canonical	3	66	junction_7	32.906484690618	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCTCCTCCCTA	6473	False	NA	26	True	AATAAA	-22	NA	3637612	3659048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.16	chr8	+	3998	17	NNC	ENSMUSG00000044433.17	novel	3925	17	NA	NA	-176	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	43.6633069636279	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACCAAGTTTACGTCT	6478	False	NA	47	True	AATAAA	-43	NA	3637617	3659069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656697_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.17	chr8	+	5338	13	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-175	2	intron_retention	FALSE	canonical	3	66	junction_7	29.0443865297391	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACGGTGTCTCCTCC	6479	False	NA	23	True	AATAAA	-19	NA	3637618	3659045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3657891_3658188
ES.32388.18	chr8	+	4174	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	-193	-149	-175	2	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTACGTCTCGTGTTTT	6479	False	NA	55	True	NA	NA	NA	3637618	3659077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.19	chr8	+	5082	16	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-172	-9	intron_retention	FALSE	canonical	3	66	junction_7	32.4889040887637	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGACCAAGTTTACG	6482	False	NA	44	True	AATAAA	-40	NA	3637621	3659066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.2	chr8	+	5584	2	FSM	ENSMUSG00000065952.14	ENSMUST00000138454.2	637	2	-11	-4936	-11	-11	multi-exon	FALSE	canonical	3	29	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTTTATTTATTTATC	NA	False	NA	13	True	ATTAAA	-41	NA	3617978	3628586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3618097_3623120
ES.32388.20	chr8	+	3993	16	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-170	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	43.0123496477723	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	6484	False	NA	50	True	NA	NA	NA	3637623	3659072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.21	chr8	+	4769	15	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-147	-1	intron_retention	FALSE	canonical	3	66	junction_5	32.4298300573873	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	6507	False	NA	52	True	NA	NA	NA	3637646	3659074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.23	chr8	+	4045	18	NNC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_11	47.5347987628601	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAGACACGGTGTCTC	6521	False	NA	19	True	AATAAA	-15	NA	3637660	3659041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653656_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.24	chr8	+	5147	15	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-131	0	intron_retention	FALSE	canonical	3	66	junction_7	32.8550465169759	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6523	False	NA	53	True	NA	NA	NA	3637662	3659075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.25	chr8	+	5668	14	NIC	ENSMUSG00000044433.17	novel	3865	19	NA	NA	-131	-6	intron_retention	FALSE	canonical	2	4	junction_4	50.7882248851271	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACCAAGTTTACGTCT	6523	False	NA	47	True	AATAAA	-43	NA	3637662	3659069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648989_3649216_3649250_3650357_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393
ES.32388.26	chr8	+	7157	10	NIC	ENSMUSG00000044433.17	novel	3925	17	NA	NA	-118	-7	intron_retention	FALSE	canonical	3	47	junction_6	35.293828369669	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGCTGAGACACG	6536	False	NA	12	True	AATAAA	-8	NA	3637675	3659034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3657891_3658188
ES.32388.27	chr8	+	3965	17	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-118	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	50.4627028110861	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACGGTGTCTCCTCC	6536	False	NA	23	True	AATAAA	-19	NA	3637675	3659045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.28	chr8	+	4019	18	NNC	ENSMUSG00000044433.17	novel	3817	18	NA	NA	-118	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	52.9044316927567	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACGGTGTCTCCTCC	6536	False	NA	23	True	AATAAA	-19	NA	3637675	3659045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653656_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.29	chr8	+	3982	18	NNC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-118	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	48.1290796140781	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGACCAAGTTTACG	6536	False	NA	44	True	AATAAA	-40	NA	3637675	3659066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656697_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.3	chr8	+	4579	22	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	4466	11	NA	NA	-7	1	multi-exon	TRUE	canonical	0	0	junction_5	58.5268510194204	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTACGTCTCGTGTTT	NA	False	NA	54	True	NA	NA	NA	3617982	3659076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399_3630475_3635284_3635439_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.32	chr8	+	4089	19	FSM	ENSMUSG00000044433.17	ENSMUST00000207432.2	3865	19	-131	-93	-113	-20	multi-exon	FALSE	canonical	2	4	junction_5	49.6220592623089	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAACTGAAAAGAG	6541	False	NA	-1	True	NA	NA	NA	3637680	3659021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.33	chr8	+	5075	17	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-113	-8	intron_retention	FALSE	canonical	3	30	junction_5	43.6856222772436	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACCAAGTTTACGT	6541	False	NA	45	True	AATAAA	-41	NA	3637680	3659067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.35	chr8	+	3882	15	NNC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-99	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	50.5490265151828	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACACGGTGTCTCCTCCC	6555	False	NA	24	True	AATAAA	-20	NA	3637694	3659046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658294_3658393_3658513_3658597
ES.32388.36	chr8	+	2827	18	FSM	ENSMUSG00000044433.17	ENSMUST00000208240.2	2572	18	-109	-146	-91	-1	multi-exon	FALSE	canonical	1	2	junction_5	54.5754929347023	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	6563	False	NA	52	True	NA	NA	NA	3637702	3659074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3654853_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.37	chr8	+	4040	18	NIC	ENSMUSG00000044433.17	novel	3817	18	NA	NA	-91	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	49.0698957740923	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGAGACACGGTGTC	6563	False	NA	17	True	AATAAA	-13	NA	3637702	3659039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.39	chr8	+	3990	18	NNC	ENSMUSG00000044433.17	novel	3817	18	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	55.041161068465	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGAGACACGGTGTC	6632	False	NA	17	True	AATAAA	-13	NA	3637771	3659039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652101_3652161_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.4	chr8	+	4993	22	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	3865	19	NA	NA	-7	4	multi-exon	FALSE	canonical	0	0	junction_5	55.7240935608163	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTACGTCTCGTGTTTTCA	NA	False	NA	57	True	NA	NA	NA	3617982	3659079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399_3630475_3635284_3635439_3637500_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.40	chr8	+	4013	16	ISM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	481	41	-20	-7	intron_retention	FALSE	canonical	3	66	junction_7	31.4610164418691	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGCTGAGACACG	6634	False	NA	12	True	AATAAA	-8	NA	3637773	3659034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393
ES.32388.41	chr8	+	4670	15	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	99	-9	intron_retention	FALSE	canonical	2	2	junction_2	43.9491821567239	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGACCAAGTTTACG	6771	False	NA	44	True	AATAAA	-40	NA	3637910	3659066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3637960_3647841_3648096_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.42	chr8	+	3905	18	NNC	ENSMUSG00000044433.17	novel	4466	11	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	58.2332738805849	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGAGACACGGTGT	6916	False	NA	16	True	AATAAA	-12	NA	3638055	3659038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3638230_3647841_3648096_3648685_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653656_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.43	chr8	+	7561	16	ISM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	6739	32	5981	0	3prime_fragment	FALSE	canonical	3	66	junction_6	32.1111956938525	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACACGGTGTCTCCT	3302	False	NA	21	True	AATAAA	-17	NA	3644031	3659043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.44	chr8	+	3491	17	NNC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-2524	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	49.5170030772259	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGCTGAGACACG	7294	False	NA	12	True	AATAAA	-8	NA	3648023	3659034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656300_3656513_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.45	chr8	+	4723	14	NNC	ENSMUSG00000044433.17	novel	4466	11	NA	NA	-2228	-1	intron_retention	FALSE	canonical	1	1	junction_1	45.7558480758044	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTTACGTCTCGTGT	7590	False	NA	52	True	NA	NA	NA	3648319	3659074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3648441_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.46	chr8	+	3891	15	ISM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	11028	3	-2227	-3	3prime_fragment	FALSE	canonical	3	66	junction_5	31.8741946676977	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	7591	False	NA	50	True	NA	NA	NA	3648320	3659072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.47	chr8	+	3593	16	NNC	ENSMUSG00000044433.17	novel	4466	11	NA	NA	-2208	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.3815116790039	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGAGACACGGTGT	7610	False	NA	16	True	AATAAA	-12	NA	3648339	3659038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3648441_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.48	chr8	+	3897	16	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-2207	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	45.0701182110226	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGTGTCTCCTCCCT	7611	False	NA	25	True	AATAAA	-21	NA	3648340	3659047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.49	chr8	+	3837	16	ISM	ENSMUSG00000044433.17	ENSMUST00000207970.2	3817	18	10565	-113	-2171	0	3prime_fragment	FALSE	canonical	1	2	junction_3	50.5083491448031	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAGACACGGTGTCTC	7647	False	NA	19	True	AATAAA	-15	NA	3648376	3659041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3648809_3648892_3648989_3649216_3649250_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.5	chr8	+	4343	20	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	4466	11	NA	NA	-6	0	multi-exon	FALSE	canonical	0	0	junction_4	54.5917611715507	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACACGGTGTCTCCT	NA	False	NA	21	True	AATAAA	-17	NA	3617983	3659043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399_3630475_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.52	chr8	+	3675	14	NIC	ENSMUSG00000044433.17	novel	3925	17	NA	NA	-1942	-7	intron_retention	FALSE	canonical	3	47	junction_5	34.8944308131706	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGCTGAGACACG	7876	False	NA	12	True	AATAAA	-8	NA	3648605	3659034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.53	chr8	+	3546	11	NIC	ENSMUSG00000044433.17	novel	3925	17	NA	NA	-1942	2	intron_retention	FALSE	canonical	0	0	junction_9	47.3084559037811	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACGGTGTCTCCTCC	7876	False	NA	23	True	AATAAA	-19	NA	3648605	3659045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3657790_3657891_3658188
ES.32388.54	chr8	+	4812	14	NNC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-1915	-8	intron_retention	FALSE	canonical	0	0	junction_8	50.4881496436329	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGAAGCTGAGACAC	-2	True	NA	11	True	AATAAA	-7	NA	3648632	3659033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3648809_3648892_3648989_3650357_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653621_3655077_3656266_3656407_3656503_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.55	chr8	+	3663	14	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-1914	-9	intron_retention	FALSE	canonical	3	86	junction_2	28.6395679449081	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGACCAAGTTTACG	-1	True	NA	44	True	AATAAA	-40	NA	3648633	3659066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.56	chr8	+	4578	12	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-1891	-3	intron_retention	FALSE	canonical	3	86	junction_2	27.6252968272449	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAAGTTTACGTCTCGT	22	False	NA	50	True	NA	NA	NA	3648656	3659072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.57	chr8	+	4540	11	NIC	ENSMUSG00000044433.17	novel	3925	17	NA	NA	-1674	-1	intron_retention	FALSE	canonical	3	47	junction_4	34.0757978629995	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAGACACGGTGTCT	239	False	NA	18	True	AATAAA	-14	NA	3648873	3659040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3657891_3658188
ES.32388.58	chr8	+	3240	12	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	-1626	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	47.1030170464274	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACCAAGTTTACGT	287	False	NA	45	True	AATAAA	-41	NA	3648921	3659067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.59	chr8	+	2876	10	NIC	ENSMUSG00000044433.17	novel	4450	17	NA	NA	149	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	53.5394166554182	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAGACACGGTGTCT	3597	False	NA	18	True	AATAAA	-14	NA	3652231	3659040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3652280_3652370_3652426_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.6	chr8	+	4475	19	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	4466	11	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_4	53.1264796453348	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACACGGTGTCTCCTCC	NA	False	NA	23	True	AATAAA	-19	NA	3617983	3659045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3623120_3623222_3627840_3628046_3629722_3629922_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.60	chr8	+	1102	5	ISM	ENSMUSG00000044433.17	ENSMUST00000208064.2	3241	10	4418	-4	163	-1	3prime_fragment	FALSE	canonical	3	138	junction_1	15.4171171105366	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACACGGTGTCTCCTCCCT	693	False	NA	25	True	AATAAA	-21	NA	3656500	3659047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32388.7	chr8	+	368	3	NNC	ENSMUSG00000065952.14	novel	960	3	NA	NA	1	-1462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCGCATTATATGAATC	NA	False	NA	NA	False	NA	NA	NA	3617995	3627135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3618097_3623120_3623222_3626969
ES.32388.8	chr8	+	276	1	NIC	ENSMUSG00000065952.14	novel	637	2	NA	NA	3	-5374	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAGAAAGAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3618000	3618276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3618000_3618300
ES.32388.9	chr8	+	4789	22	Fusion	ENSMUSG00000065952.14_ENSMUSG00000044433.17	novel	3865	19	NA	NA	3	-2	multi-exon	FALSE	canonical	0	0	junction_5	55.7240935608163	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAAGTTTACGTCTCGTG	NA	False	NA	51	True	NA	NA	NA	3618000	3659073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3618097_3627840_3628046_3629722_3629922_3630399_3630475_3635284_3635439_3637680_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ES.32389.1	chr8	-	379	3	Antisense	novelGene_ENSMUSG00000065952.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	3626341	3619784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_3619915_3624920_3625047_3626218
ES.32389.2	chr8	-	364	2	Antisense	novelGene_ENSMUSG00000065952.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	3626690	3619784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_3619915_3626456
ES.32389.3	chr8	-	154	1	Intergenic	novelGene_26438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	4649	False	NA	NA	False	NA	NA	NA	3620930	3620776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3620800_3620900
ES.3239.1	chr10	-	3283	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	6	-1	6	1	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGACTGAGTCCTTGGG	NA	False	NA	2	True	AATAAA	-16	NA	78427792	78420335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ES.3239.10	chr10	-	2881	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	45	362	45	-362	multi-exon	FALSE	canonical	3	17	junction_5	4.14039335605413	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAGACAGAGTCAGAC	NA	False	NA	NA	False	NA	NA	NA	78427753	78420698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ES.3239.2	chr10	-	4715	6	NIC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	19	junction_1	3.54400902933387	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	0	True	AATAAA	-14	NA	78427798	78420337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78425580_78425735_78426078_78427635
ES.3239.3	chr10	-	3190	8	NNC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.30218319777126	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	0	True	AATAAA	-14	NA	78427775	78420337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424614_78424756_78424934_78425580_78425735_78426078_78427635
ES.3239.4	chr10	-	3065	7	NIC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.93310961716756	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	0	True	AATAAA	-14	NA	78427791	78420337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424934_78425580_78425735_78426078_78427635
ES.3239.5	chr10	-	5035	4	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	1394	1	1394	-1	intron_retention	FALSE	canonical	3	19	junction_1	3.09120616516523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	1215	False	NA	0	True	AATAAA	-14	NA	78426404	78420337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164
ES.3239.6	chr10	-	3301	8	NNC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	8.97161055320433	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGACTGAGTCCTTG	NA	False	NA	0	True	AATAAA	-14	NA	78427794	78420337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424774_78424934_78425580_78425735_78426078_78427635
ES.3239.7	chr10	-	3164	8	NNC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.30218319777126	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGACTGAGTCCTT	NA	False	NA	-1	True	AATAAA	-13	NA	78427751	78420338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78421746_78421923_78422075_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ES.3239.8	chr10	-	3417	7	NIC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	47	-3	intron_retention	FALSE	canonical	3	19	junction_1	3.23608130649127	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGTGACTGAGTCCT	NA	False	NA	-2	True	AATAAA	-12	NA	78427751	78420339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78425580_78425735_78426078_78427635
ES.3239.9	chr10	-	3254	6	NIC	ENSMUSG00000032714.7	novel	3288	8	NA	NA	44	-8	intron_retention	FALSE	canonical	0	0	junction_2	10.6018866245589	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGATTCTGTGACTGA	NA	False	NA	-7	True	AATAAA	-7	NA	78427754	78420344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_78421746_78421923_78422150_78423164_78423292_78424540_78425580_78425735_78426078_78427635
ES.32390.1	chr8	-	147	1	FSM	ENSMUSG00000066902.8	ENSMUST00000146939.2	432	1	326	-41	326	41	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATATAGTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	3633904	3633757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3633800_3633900
ES.32391.1	chr8	+	200	1	Intergenic	novelGene_26439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAATACCAATATCACAA	1183	False	NA	NA	False	ATTAAA	-14	NA	3667146	3667346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3667100_3667300
ES.32392.1	chr8	-	2744	18	NNC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	6	3	intron_retention	FALSE	canonical	1	1	junction_11	110.890263409513	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGACCTCCTTCCTG	1031	False	NA	-1	True	AATACA	-19	NA	3671296	3660083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664237_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.10	chr8	-	2662	19	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	103.747318870607	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1031	False	NA	-5	True	AATACA	-15	NA	3671296	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660840_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.11	chr8	-	2728	18	FSM	ENSMUSG00000019470.13	ENSMUST00000163038.8	4409	18	14	1667	-9	-1	multi-exon	FALSE	canonical	3	374	junction_11	45.4063544476041	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1036	False	NA	-5	True	AATACA	-15	NA	3671291	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.12	chr8	-	2819	18	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	6	-1	intron_retention	FALSE	canonical	3	18	junction_16	107.433764901126	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1031	False	NA	-5	True	AATACA	-15	NA	3671296	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668858_3669094_3671227
ES.32392.13	chr8	-	4039	15	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	5	-1	intron_retention	FALSE	canonical	3	374	junction_8	47.551261276433	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1030	False	NA	-5	True	AATACA	-15	NA	3671297	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3663077_3663158_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.14	chr8	-	2125	9	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	7114	-1	intron_retention	FALSE	canonical	3	392	junction_4	56.638657293407	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	8171	False	NA	-5	True	AATACA	-15	NA	3664156	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663500_3663589
ES.32392.15	chr8	-	2599	19	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	108.258720744723	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1031	False	NA	-5	True	AATACA	-15	NA	3671296	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3663019_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.16	chr8	-	2624	19	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	106.734469191448	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1030	False	NA	-5	True	AATACA	-15	NA	3671297	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666126_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.17	chr8	-	5475	16	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	6	-1	intron_retention	FALSE	canonical	3	374	junction_10	45.8209074065056	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1031	False	NA	-5	True	AATACA	-15	NA	3671296	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.18	chr8	-	4426	16	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	6	1	intron_retention	FALSE	canonical	3	374	junction_10	47.8113886944198	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGGTCTTGACCTCCT	1031	False	NA	-6	True	AATACA	-14	NA	3671296	3660088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663710_3663798_3663951_3664244_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.19	chr8	-	2760	18	NNC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	-8	1	intron_retention	FALSE	canonical	1	1	junction_11	110.890263409513	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGGTCTTGACCTCCT	1037	False	NA	-6	True	AATACA	-14	NA	3671290	3660088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663985_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.2	chr8	-	2814	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	-134	-3	-134	3	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGACCTCCTTCCTG	877	False	NA	-1	True	AATACA	-19	NA	3671450	3660083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.20	chr8	-	2649	19	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.292071914366	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	1030	False	NA	-7	True	AATACA	-13	NA	3671297	3660089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663494_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.21	chr8	-	4076	15	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	374	junction_8	40.5647001462994	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	1025	False	NA	-7	True	AATACA	-13	NA	3671302	3660089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660675_3660846_3661019_3661113_3661237_3661393_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.24	chr8	-	4443	17	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	-3	0	intron_retention	FALSE	canonical	3	18	junction_15	110.744762150406	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	1019	False	NA	-7	True	AATACA	-13	NA	3671308	3660089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668858_3669094_3671227
ES.32392.25	chr8	-	2748	18	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	1	0	intron_retention	FALSE	canonical	3	374	junction_11	44.9084420358797	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	1026	False	NA	-7	True	AATACA	-13	NA	3671301	3660089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.26	chr8	-	2748	18	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	374	junction_11	45.3905009650111	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	1027	False	NA	-7	True	AATACA	-13	NA	3671300	3660089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.27	chr8	-	2822	18	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	10	-1	intron_retention	FALSE	canonical	3	18	junction_16	107.438209488671	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCGGTCTTGACCTC	1035	False	NA	-8	True	AATACA	-12	NA	3671292	3660090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668858_3669094_3671227
ES.32392.28	chr8	-	4879	15	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	-131	-1	intron_retention	FALSE	canonical	3	392	junction_4	45.5223649900323	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCGGTCTTGACCTC	880	False	NA	-8	True	AATACA	-12	NA	3671447	3660090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663710_3663798_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.3	chr8	-	2829	17	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	-6	3	intron_retention	FALSE	canonical	3	374	junction_10	45.9217660129704	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGACCTCCTTCCTG	1039	False	NA	-1	True	AATACA	-19	NA	3671288	3660083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.30	chr8	-	2747	18	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_11	110.866577127083	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCGGTCTTGACCTC	1031	False	NA	-8	True	AATACA	-12	NA	3671296	3660090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664237_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.31	chr8	-	4929	12	NIC	ENSMUSG00000019470.13	novel	4409	18	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	374	junction_6	42.9445154234936	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCGGTCTTGACCTC	1037	False	NA	-8	True	AATACA	-12	NA	3671290	3660090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3661835_3662962_3663077_3663158_3663710_3663798_3663951_3664244_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.32	chr8	-	4219	14	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	-8	-8	intron_retention	FALSE	canonical	1	1	junction_7	121.413080410121	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTACATCCCGGTCT	1037	False	NA	-15	True	AATACA	-5	NA	3671290	3660097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3661237_3661393_3663077_3663158_3663291_3663367_3663710_3663798_3663951_3664237_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.4	chr8	-	2743	19	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	104.446291354829	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1031	False	NA	-4	True	AATACA	-16	NA	3671296	3660086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668858_3669094_3671227
ES.32392.5	chr8	-	2968	18	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	2	-1	intron_retention	FALSE	canonical	3	392	junction_4	43.204110402939	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1013	False	NA	-5	True	AATACA	-15	NA	3671314	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.6	chr8	-	2636	19	NNC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	108.002471965309	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1039	False	NA	-5	True	AATACA	-15	NA	3671288	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664256_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32392.8	chr8	-	4919	14	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	4	-1	intron_retention	FALSE	canonical	3	392	junction_3	38.1083786156018	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGGTCTTGACCTCCTT	1015	False	NA	-5	True	AATACA	-15	NA	3671312	3660087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_3660220_3660310_3660421_3660544_3661019_3661113_3661237_3661393_3661835_3662962_3663077_3663158_3663291_3663367_3663710_3663798_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ES.32393.1	chr8	+	1205	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	-20	8	-17	-8	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAGCCCTACTCTTC	5567	False	NA	NA	False	AAAACA	-6	NA	3671530	3674227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ES.32393.10	chr8	+	360	4	FSM	ENSMUSG00000087687.4	ENSMUST00000207389.2	363	4	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	322.072800603977	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5641	False	NA	10	True	NA	NA	NA	3671604	3673372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3671696_3672341_3672429_3672592_3672626_3673223
ES.32393.11	chr8	+	638	4	NNC	ENSMUSG00000087687.4	novel	363	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	310.762860643861	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5641	False	NA	10	True	NA	NA	NA	3671604	3673372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3671974_3672341_3672429_3672592_3672626_3673223
ES.32393.12	chr8	+	1401	1	NIC	ENSMUSG00000087687.4	novel	656	5	NA	NA	1200	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAATAAAGCAAAACA	6838	False	NA	NA	False	NA	NA	NA	3672801	3674202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3672800_3674200
ES.32393.13	chr8	+	2230	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	118.247386628392	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4552	False	NA	15	True	AATAAA	-21	NA	3681119	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686518_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.15	chr8	+	1886	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	175	847	-22	2	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTCACCTCATTTTCTT	4562	False	NA	18	True	AATAAA	-24	NA	3681129	3692797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.16	chr8	+	3159	19	NNC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	109.061654326553	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGGCTCACCTCATT	4564	False	NA	13	True	AATAAA	-19	NA	3681131	3692792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690512_3690727_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.17	chr8	+	2833	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-20	0	intron_retention	FALSE	canonical	3	5	junction_15	89.386722499315	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4564	False	NA	15	True	AATAAA	-21	NA	3681131	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897
ES.32393.19	chr8	+	3288	17	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-19	2	intron_retention	FALSE	canonical	3	307	junction_9	31.8080178571378	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCAGGGCTCACCTCA	4565	False	NA	11	True	AATAAA	-17	NA	3681132	3692790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897
ES.32393.2	chr8	+	345	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	-8	856	-5	7	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAAGTGTTTTATTGT	5579	False	NA	17	True	NA	NA	NA	3671542	3673379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ES.32393.22	chr8	+	1793	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	88.3019356181394	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4570	False	NA	15	True	AATAAA	-21	NA	3681137	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.23	chr8	+	1889	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	114.50839637121	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4571	False	NA	15	True	AATAAA	-21	NA	3681138	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686216_3686391_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.24	chr8	+	2723	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	185	0	-12	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCGGCTTCCTAGTAAC	4572	False	NA	NA	False	NA	NA	NA	3681139	3693644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.25	chr8	+	2663	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-10	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.1602109120237	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAATACA	4574	False	NA	NA	False	NA	NA	NA	3681141	3693615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682553_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.26	chr8	+	3753	16	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-10	0	intron_retention	FALSE	canonical	3	307	junction_7	33.7780994136734	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4574	False	NA	15	True	AATAAA	-21	NA	3681141	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.27	chr8	+	4984	15	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_12	99.0205091104353	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4574	False	NA	16	True	AATAAA	-22	NA	3681141	3692795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3690516_3690731_3691207_3691734_3691821_3691897
ES.32393.28	chr8	+	2691	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	307	junction_9	32.0950146502214	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGCTCACCTCATTT	4575	False	NA	14	True	AATAAA	-20	NA	3681142	3692793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.29	chr8	+	1762	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	91.2432013867771	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4575	False	NA	15	True	AATAAA	-21	NA	3681142	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.3	chr8	+	1229	2	NIC	ENSMUSG00000087687.4	novel	363	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	673	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5582	False	NA	10	True	NA	NA	NA	3671545	3673372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3672626_3673223
ES.32393.30	chr8	+	1774	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_15	89.4565290419615	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4575	False	NA	15	True	AATAAA	-21	NA	3681142	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691734_3691821_3691897_3692056_3692645
ES.32393.31	chr8	+	4630	17	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-9	-29	intron_retention	FALSE	non_canonical	0	0	junction_14	93.2139466161046	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAATACA	4575	False	NA	NA	False	NA	NA	NA	3681142	3693615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3690516_3690731_3691207_3691734_3691821_3691897
ES.32393.32	chr8	+	3057	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	188	-337	-9	337	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAAGCACTTCACTC	4575	False	NA	-15	True	NA	NA	NA	3681142	3693981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.33	chr8	+	3133	17	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_14	124.549296841652	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4575	False	NA	15	True	AATAAA	-21	NA	3681142	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3690512_3690727_3691207_3691897_3692056_3692645
ES.32393.34	chr8	+	2232	19	NIC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	108.223092056737	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4578	False	NA	15	True	AATAAA	-21	NA	3681145	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.35	chr8	+	4098	17	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-4	-29	intron_retention	FALSE	canonical	3	307	junction_9	31.8080178571378	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAATACA	4580	False	NA	NA	False	NA	NA	NA	3681147	3693615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897
ES.32393.36	chr8	+	3760	16	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-4	355	intron_retention	FALSE	canonical	2	3	junction_1	93.0661891105226	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGCTTTACAGGAAT	4580	False	NA	3	True	NA	NA	NA	3681147	3693999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.37	chr8	+	2397	18	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	90.8463854203602	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4581	False	NA	16	True	AATAAA	-22	NA	3681148	3692795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684532_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897
ES.32393.38	chr8	+	3963	19	NNC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	-2	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	109.061654326553	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAATAAAATAC	4582	False	NA	NA	False	NA	NA	NA	3681149	3693614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690516_3690731_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.39	chr8	+	3117	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-1	-29	intron_retention	FALSE	canonical	3	5	junction_14	90.2496729091447	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAATACA	4583	False	NA	NA	False	NA	NA	NA	3681150	3693615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.4	chr8	+	5545	6	NNC	ENSMUSG00000087687.4	novel	552	6	NA	NA	1	4697	intron_retention	FALSE	canonical	0	0	junction_5	314.118066974824	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATGTGGTCATAGTCT	5592	False	NA	NA	False	AATACA	-44	NA	3671555	3680545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223_3673509_3675419_3676554_3676595
ES.32393.41	chr8	+	3038	17	NIC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	69	junction_15	78.5501183560534	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4583	False	NA	15	True	AATAAA	-21	NA	3681150	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.42	chr8	+	1934	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.43	chr8	+	1844	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	117.759170437899	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685838_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691198_3691734_3691821_3691897_3692056_3692645
ES.32393.44	chr8	+	5516	14	NNC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_12	123.11009168446	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690512_3690727_3691821_3691894
ES.32393.45	chr8	+	3044	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_14	89.8413827166685	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.46	chr8	+	3653	18	ISM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	-353	0	353	intron_retention	FALSE	canonical	3	307	junction_10	31.3091516298118	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGATGGCTTTACAGGA	4585	False	NA	1	True	NA	NA	NA	3681152	3693997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897
ES.32393.48	chr8	+	2627	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	118.445121949282	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAAATACA	4585	False	NA	NA	False	NA	NA	NA	3681152	3693615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684379_3684475_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.49	chr8	+	2756	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	85.1558311035378	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.5	chr8	+	385	5	NNC	ENSMUSG00000087687.4	novel	656	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	312.529498607731	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTAGTGCCAAGTGT	5594	False	NA	9	True	NA	NA	NA	3671557	3673371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3671612_3672341_3672429_3672592_3672626_3672911_3672975_3673223
ES.32393.50	chr8	+	2946	15	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	2	intron_retention	FALSE	canonical	3	307	junction_9	34.1208087805189	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCAGGGCTCACCTCA	4585	False	NA	11	True	AATAAA	-17	NA	3681152	3692790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734
ES.32393.51	chr8	+	2261	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	326	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTTGTGTGTTAC	4585	False	NA	NA	False	AATATA	-19	NA	3681152	3693121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.52	chr8	+	1850	18	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	114.127834596814	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGGCTCACCTCATT	4585	False	NA	13	True	AATAAA	-19	NA	3681152	3692792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.53	chr8	+	4552	17	NNC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	113.424654920127	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4585	False	NA	15	True	AATAAA	-21	NA	3681152	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690512_3690727_3691207_3691734_3691821_3691894
ES.32393.54	chr8	+	3058	17	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	-4	intron_retention	FALSE	canonical	3	5	junction_13	121.880688969787	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAACACCGGCTTCCTAG	4585	False	NA	NA	False	NA	NA	NA	3681152	3693640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.55	chr8	+	3154	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	118.68752417614	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4587	False	NA	15	True	AATAAA	-21	NA	3681154	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682601_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690516_3690731_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.57	chr8	+	5284	14	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	130.939481933426	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGCTCACCTCATTT	4592	False	NA	14	True	AATAAA	-20	NA	3681159	3692793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690512_3690727_3691207_3691734
ES.32393.59	chr8	+	2466	18	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_6	139.641657063869	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACCAGGGCTCACCTCA	4594	False	NA	11	True	AATAAA	-17	NA	3681161	3692790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684532_3684624_3685445_3685531_3685615_3685747_3685831_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.6	chr8	+	5184	21	Fusion	ENSMUSG00000004626.15_ENSMUSG00000087687.4	novel	552	6	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_2	160.511494915473	351	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	5599	False	NA	15	True	AATAAA	-21	NA	3671562	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_3671612_3672341_3672429_3672594_3672626_3673223_3675482_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684345_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.60	chr8	+	3716	18	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	90.5025568852514	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4595	False	NA	15	True	AATAAA	-21	NA	3681162	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3690516_3690732_3691207_3691734_3691821_3691897
ES.32393.61	chr8	+	5180	16	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-2	355	intron_retention	FALSE	canonical	3	5	junction_13	94.5857400574855	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGCTTTACAGGAAT	4595	False	NA	3	True	NA	NA	NA	3681162	3693999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691897
ES.32393.62	chr8	+	3772	14	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-2	0	intron_retention	FALSE	canonical	3	10	junction_2	98.4529443364733	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	4595	False	NA	15	True	AATAAA	-21	NA	3681162	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681205_3682219_3682270_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897
ES.32393.63	chr8	+	2256	19	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-1	331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.7438399879252	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTGTTACACTTG	4596	False	NA	NA	False	AATATA	-24	NA	3681163	3693126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684699_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.64	chr8	+	3125	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	353	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGATGGCTTTACAGGA	4597	False	NA	1	True	NA	NA	NA	3681164	3693997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.65	chr8	+	2282	19	NIC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	127.403764213631	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGGCTCACCTCATT	4600	False	NA	13	True	AATAAA	-19	NA	3681167	3692792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690748_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.66	chr8	+	6155	7	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	16	1	intron_retention	FALSE	non_canonical	0	0	junction_5	170.368880830848	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCACCAGGGCTCACCTC	4618	False	NA	10	True	AATAAA	-16	NA	3681185	3692789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3681279_3682219_3685531_3685615_3685747_3685831_3687255_3689507_3690516_3690731_3690868_3692736
ES.32393.67	chr8	+	2014	18	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-683	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	90.0708679078576	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	5664	False	NA	15	True	AATAAA	-21	NA	3682231	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3690892_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.68	chr8	+	5157	12	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-417	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	107.435700547193	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGGCTCACCTCATTT	5930	False	NA	14	True	AATAAA	-20	NA	3682497	3692793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3682582_3683290_3683368_3683847_3683927_3684019_3685531_3685615_3685747_3685831_3686422_3686493_3686575_3687115_3687255_3689507_3690516_3690731_3691207_3691734_3691821_3691897
ES.32393.69	chr8	+	2656	14	NIC	ENSMUSG00000004626.15	novel	1847	19	NA	NA	957	377	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	119.895072469084	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCCACAGTTCTGGAA	7304	False	NA	25	True	NA	NA	NA	3683871	3694021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3683927_3684019_3684124_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ES.32393.7	chr8	+	5145	7	NNC	ENSMUSG00000087687.4	novel	552	6	NA	NA	13	4389	intron_retention	FALSE	canonical	0	0	junction_6	319.352817777176	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGAGAGAGCCTTTC	5604	False	NA	NA	False	ATTAAA	-36	NA	3671567	3680237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223_3673509_3675419_3675907_3675986_3676554_3676595
ES.32393.70	chr8	+	1248	12	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	-859	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	104.561658823241	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	7989	False	NA	15	True	AATAAA	-21	NA	3684556	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691897_3692056_3692645
ES.32393.71	chr8	+	1118	8	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	662	0	intron_retention	FALSE	canonical	3	310	junction_4	34.1443514317358	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTCACCTCATTTT	9510	False	NA	15	True	AATAAA	-21	NA	3686077	3692794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3686239_3686355_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ES.32393.8	chr8	+	5163	6	NNC	ENSMUSG00000087687.4	novel	552	6	NA	NA	13	4365	intron_retention	FALSE	canonical	2	5	junction_5	312.90535310218	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTAAATTATTATTTG	5604	False	NA	NA	False	ATTAAA	-12	NA	3671567	3680213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223_3673509_3675419_3675907_3675986
ES.32393.9	chr8	+	1032	3	NIC	ENSMUSG00000087687.4	novel	363	4	NA	NA	-18	0	intron_retention	FALSE	canonical	3	673	junction_2	10	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5615	False	NA	10	True	NA	NA	NA	3671578	3673372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_3672429_3672592_3672626_3673223
ES.32394.1	chr8	+	174	1	Genic_Genomic	ENSMUSG00000012705.17	novel	NA	NA	NA	NA	4200	33	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCATCCTGGTCTA	NA	False	NA	NA	False	NA	NA	NA	3709969	3710143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_3710000_3710100
ES.32395.1	chr8	+	1208	7	FSM	ENSMUSG00000013974.4	ENSMUST00000014118.4	1494	7	-58	344	-58	-344	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTCTGGAGCTGTTT	4232	False	NA	NA	False	GATAAA	-15	NA	3715695	3718915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3715837_3716051_3716142_3717005_3717138_3717259_3717311_3717398_3717555_3718191_3718246_3718331
ES.32396.1	chr8	-	1180	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	22	-810	22	810	multi-exon	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTGGTCACGGT	NA	False	NA	NA	False	NA	NA	NA	3722340	3720377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3721397_3722179
ES.32396.2	chr8	-	380	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	14	-2	14	2	multi-exon	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTCTTTCTATTA	NA	False	NA	-2	True	AATACA	-17	NA	3722348	3721185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_3721397_3722179
ES.32397.1	chr8	+	745	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	173	1628	-38	-1293	multi-exon	FALSE	canonical	3	198	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTTGTGTCTTGT	NA	False	NA	22	True	GATAAA	-22	NA	3726471	3729627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3726604_3729014
ES.32397.2	chr8	+	2013	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	198	335	-13	0	multi-exon	FALSE	canonical	3	198	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGGCTATTATTATTG	NA	False	NA	14	True	NA	NA	NA	3726496	3730920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3726604_3729014
ES.32397.3	chr8	+	1645	3	NNC	ENSMUSG00000040236.5	novel	2546	2	NA	NA	-9	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	99	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTTGGCTATTATTATT	NA	False	NA	13	True	NA	NA	NA	3726500	3730919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_3726604_3729014_3729727_3730089
ES.32397.4	chr8	+	2320	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	226	0	15	0	multi-exon	FALSE	canonical	3	198	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTGTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	3726524	3731255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_3726604_3729014
ES.32398.1	chr8	+	155	1	Intergenic	novelGene_26440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	3751911	3752066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_3751900_3752100
ES.32399.1	chr8	-	176	1	Intergenic	novelGene_26441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACATGTGT	NA	False	NA	NA	False	NA	NA	NA	3792706	3792530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_3792500_3792700
ES.324.1	chr1	+	177	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACCTGAATTT	NA	False	NA	NA	False	NA	NA	NA	37974028	37974205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_37974000_37974200
ES.3240.1	chr10	-	2371	7	FSM	ENSMUSG00000005355.10	ENSMUST00000005488.9	2336	7	-35	0	-35	0	multi-exon	FALSE	canonical	2	2	junction_1	2.21108319357027	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAGAATCTTTGCTCT	NA	False	NA	NA	False	AGTAAA	-24	NA	78554163	78547824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78549276_78549823_78549928_78550081_78550232_78550768_78550995_78551094_78551245_78551653_78551721_78553940
ES.32400.1	chr8	-	152	1	Intergenic	novelGene_26442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	4010439	4010287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4010300_4010400
ES.32401.1	chr8	-	2233	7	NIC	ENSMUSG00000051906.16	novel	1186	8	NA	NA	-707	-25	intron_retention	FALSE	canonical	1	1	junction_6	2.58198889747161	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATATTA	NA	False	NA	NA	False	NA	NA	NA	4156542	4152818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4153735_4154101_4154254_4154484_4154572_4154822_4154892_4155270_4155355_4155465_4155547_4155698
ES.32402.1	chr8	+	175	1	Intergenic	novelGene_26443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAATGGGCCTCCC	9861	False	NA	NA	False	NA	NA	NA	4191810	4191985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4191800_4192000
ES.32403.1	chr8	-	175	1	Intergenic	novelGene_26444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTTTTCT	9639	False	NA	NA	False	NA	NA	NA	4207845	4207670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4207700_4207800
ES.32404.1	chr8	+	143	1	Intergenic	novelGene_26445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	4211440	4211583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4211400_4211600
ES.32405.1	chr8	+	4114	21	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.60143218483576	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216543	4258046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4232379_4232538_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.10	chr8	+	4004	19	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	3	2	intron_retention	FALSE	canonical	2	7	junction_1	7.88106027835793	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGGATGCCGAATAG	NA	False	NA	0	True	AATAAA	-15	NA	4216569	4258044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4233491_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256328_4256495
ES.32405.11	chr8	+	4558	20	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	9.67906041546987	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216577	4258046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251601_4251967_4252631_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.12	chr8	+	2923	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	15	-1396	-5	1396	multi-exon	FALSE	canonical	3	12	junction_10	5.9464274989274	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCCCTTATTTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	4216581	4245097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
ES.32405.13	chr8	+	2149	5	ISM	ENSMUSG00000011832.17	ENSMUST00000175650.8	2451	7	2088	2	-266	-2	3prime_fragment	FALSE	canonical	3	19	junction_1	6.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCCTAAGGGATGCCGA	2329	False	NA	-4	True	AATAAA	-11	NA	4255462	4258040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.3	chr8	+	1560	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	-19	1	-19	-1	multi-exon	FALSE	canonical	3	12	junction_10	5.9464274989274	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGCTCCGGATGTAG	NA	False	NA	NA	False	AATAAA	-23	NA	4216547	4243700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
ES.32405.4	chr8	+	3919	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	-191	0	-19	0	multi-exon	FALSE	canonical	3	9	junction_13	6.86285402963656	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216547	4258046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.5	chr8	+	3953	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	-18	3	-18	2	multi-exon	FALSE	canonical	3	9	junction_12	7.46144290294483	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCCGAATAGAGAG	NA	False	NA	4	True	AATAAA	-19	NA	4216548	4258048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.6	chr8	+	11850	17	NNC	ENSMUSG00000011832.17	novel	3728	19	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_5	10.7055768177151	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216548	4258046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4237766_4237898_4238286_4238413_4241236_4241675_4243119_4243218_4243305_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.7	chr8	+	3981	19	NNC	ENSMUSG00000011832.17	novel	3728	19	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.33999733546454	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGATGCCGAATAGAGA	NA	False	NA	3	True	AATAAA	-18	NA	4216556	4258047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4233417_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ES.32405.9	chr8	+	3171	20	NNC	ENSMUSG00000011832.17	novel	3938	20	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	8.54837950981163	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAGGGATGCCGAATAG	NA	False	NA	0	True	AATAAA	-15	NA	4216569	4258044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495_4256719_4257442
ES.32406.1	chr8	-	4569	7	FSM	ENSMUSG00000064125.15	ENSMUST00000168386.9	4616	7	45	2	45	-2	multi-exon	TRUE	canonical	0	0	junction_6	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTTTGTCAAGGTA	8633	False	NA	-2	True	NA	NA	NA	4267267	4259544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4261037_4262885_4265082_4265165_4265279_4265968_4266072_4266181_4266556_4266867_4266980_4267088
ES.32406.2	chr8	-	4579	7	NIC	ENSMUSG00000064125.15	novel	4616	7	NA	NA	53	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCTTTTGTCAAGGT	8641	False	NA	-3	True	NA	NA	NA	4267259	4259545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4261037_4262885_4265082_4265165_4265279_4265968_4266072_4266181_4266556_4266848_4266980_4267088
ES.32407.1	chr8	+	3004	3	FSM	ENSMUSG00000046589.8	ENSMUST00000053035.7	3878	3	91	783	91	-783	multi-exon	FALSE	canonical	1	1	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTACATGCTTCCCACCC	NA	False	NA	NA	False	NA	NA	NA	4276917	4286687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4277006_4281661_4281805_4283914
ES.32407.2	chr8	+	3726	3	FSM	ENSMUSG00000046589.8	ENSMUST00000053035.7	3878	3	151	1	151	-1	multi-exon	FALSE	canonical	1	1	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTTGTACAGTATGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4276977	4287469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4277006_4281661_4281805_4283914
ES.32408.1	chr8	+	3560	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	-62	-1	-62	0	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288677	4297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.10	chr8	+	6281	14	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	-71	0	intron_retention	FALSE	canonical	3	6	junction_11	125.483773910386	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGTGGAGTCAATATG	NA	False	NA	NA	False	AATAAA	-16	NA	4288793	4301423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4299747_4300266_4300382_4300466
ES.32408.11	chr8	+	7822	9	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	-21	0	intron_retention	FALSE	canonical	3	271	junction_5	27.2302107042895	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288807	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.12	chr8	+	3601	9	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	277	junction_8	24.9145414366791	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGTGTCCTAAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	4288807	4297895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4295004_4295542_4295589_4295694
ES.32408.13	chr8	+	6237	9	NIC	ENSMUSG00000002948.20	novel	3525	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	15	junction_1	101.085050823552	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGTGTCCTAAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	4288810	4297895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4290687_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294607_4294694_4294776_4294860_4295004_4295542
ES.32408.14	chr8	+	3398	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	-5	-11	intron_retention	FALSE	canonical	0	0	junction_10	94.9682052057424	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTCCGAGTCTGGTG	NA	False	NA	8	True	AATAAA	-9	NA	4288823	4297885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295593_4295702
ES.32408.15	chr8	+	7848	8	NIC	ENSMUSG00000002948.20	novel	1188	10	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	277	junction_7	25.9709413752826	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288823	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4295004_4295542_4295589_4295694
ES.32408.16	chr8	+	3623	9	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	277	junction_8	24.5496944991175	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGTGTCCTAAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	4288823	4297895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.17	chr8	+	3389	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	2	-8	intron_retention	FALSE	canonical	1	7	junction_3	92.7607675690537	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288830	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293751_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.18	chr8	+	3688	8	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	292	junction_1	21.7086458841276	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288832	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294776_4294860_4295004_4295542
ES.32408.19	chr8	+	3412	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	9	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	94.8251548904614	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTCTGGTGTCCTAAGCC	NA	False	NA	17	True	AATAAA	-18	NA	4288837	4297894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293288_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.2	chr8	+	3455	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	10	-5	intron_retention	FALSE	canonical	0	0	junction_6	94.9018440284487	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTCTGGTGTCCTAA	NA	False	NA	14	True	AATAAA	-15	NA	4288749	4297891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294453_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.20	chr8	+	3421	11	NNC	ENSMUSG00000002948.20	novel	3525	12	NA	NA	9	0	intron_retention	FALSE	canonical	2	3	junction_8	93.2277319256454	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288837	4297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294839_4295004_4295542_4295589_4295694
ES.32408.21	chr8	+	3380	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	10	-8	intron_retention	FALSE	canonical	0	0	junction_2	92.0258659290963	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288838	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293436_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.23	chr8	+	3491	10	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	10	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	98.9464252094455	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288838	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293287_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4295004_4295542_4295589_4295694
ES.32408.24	chr8	+	4743	10	NIC	ENSMUSG00000002948.20	novel	1558	12	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_1	99.9460348215136	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288838	4297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4290290_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.25	chr8	+	1340	3	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288839	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4296892
ES.32408.28	chr8	+	3442	12	FSM	ENSMUSG00000002948.20	ENSMUST00000062686.11	3525	12	81	2	13	-1	multi-exon	FALSE	canonical	3	15	junction_1	114.000217485656	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGGTGTCCTAAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	4288841	4297895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.29	chr8	+	3371	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	16	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	94.7863386781028	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288844	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293607_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.3	chr8	+	3564	10	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	277	junction_9	23.6366528515501	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288760	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.30	chr8	+	7655	10	FSM	ENSMUSG00000002948.20	ENSMUST00000110996.2	1188	10	-4411	-2056	24	0	multi-exon	FALSE	canonical	3	271	junction_6	25.9776732247682	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288852	4297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.31	chr8	+	8296	4	NIC	ENSMUSG00000002948.20	novel	1188	10	NA	NA	24	-8	intron_retention	FALSE	canonical	3	299	junction_3	22.6274169979695	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288852	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293857_4293950_4295004_4295542
ES.32408.32	chr8	+	5897	16	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	-12	-2	intron_retention	FALSE	canonical	2	6	junction_12	145.073529249443	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGGTGGAGTCAATA	NA	False	NA	NA	False	AATAAA	-14	NA	4288852	4301421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4299747_4300266_4300382_4300466_4300922_4301292
ES.32408.34	chr8	+	1545	12	FSM	ENSMUSG00000002948.20	ENSMUST00000110999.8	1578	12	24	9	24	-8	multi-exon	FALSE	canonical	2	4	junction_11	89.4399470719399	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288852	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4297656
ES.32408.35	chr8	+	1597	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	113	1787	24	1	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGACTCGCTATTTATT	NA	False	NA	NA	False	NA	NA	NA	4288852	4296109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.36	chr8	+	3725	8	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	24	-8	intron_retention	FALSE	canonical	3	271	junction_6	27.6028688245794	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288852	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294337_4294426_4294607_4294694_4295004_4295542
ES.32408.37	chr8	+	5846	15	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	6	junction_11	134.44832479736	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGGTGGAGTCAATA	NA	False	NA	NA	False	AATAAA	-14	NA	4288855	4301421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4299747_4300266_4300382_4300466_4300922_4301292
ES.32408.39	chr8	+	3225	12	NNC	ENSMUSG00000002948.20	novel	3525	12	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	90.5489228981578	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288860	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4297141_4297283
ES.32408.4	chr8	+	3395	12	NNC	ENSMUSG00000002948.20	novel	3525	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	90.5489228981578	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288761	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4296855_4296926
ES.32408.40	chr8	+	6134	15	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	-3	-5	intron_retention	FALSE	canonical	2	3	junction_13	135.349076276787	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACTTCTGGTGGAGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	4288861	4301418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4300382_4300466_4300626_4300848_4300922_4301292
ES.32408.41	chr8	+	3469	10	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	33	0	intron_retention	FALSE	canonical	3	271	junction_6	21.5171479132572	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288861	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.42	chr8	+	3376	11	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	33	-7	intron_retention	FALSE	non_canonical	0	0	junction_10	94.9682052057424	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCGAGTCTGGTGTCCT	NA	False	NA	12	True	AATAAA	-13	NA	4288861	4297889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295686
ES.32408.43	chr8	+	3580	9	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	33	-8	intron_retention	FALSE	canonical	3	271	junction_5	26.8269920043228	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288861	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293857_4293950_4294071_4294228_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.44	chr8	+	6726	13	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	4	0	intron_retention	FALSE	canonical	3	6	junction_11	111.707952566801	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGTGGAGTCAATATG	NA	False	NA	NA	False	AATAAA	-16	NA	4288868	4301423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4300382_4300466
ES.32408.45	chr8	+	8038	6	NNC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_2	123.042106613956	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288872	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4293446_4293552_4294071_4294232_4294337_4294426_4294607_4294694_4295004_4295542
ES.32408.46	chr8	+	3536	9	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	45	-5	intron_retention	FALSE	canonical	3	277	junction_8	23.8560133928534	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTCTGGTGTCCTAA	NA	False	NA	14	True	AATAAA	-15	NA	4288873	4297891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.47	chr8	+	3481	10	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	50	0	intron_retention	FALSE	canonical	3	271	junction_6	26.0810701893581	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288878	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.48	chr8	+	6238	15	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	17	-3	intron_retention	FALSE	canonical	3	6	junction_12	141.675271847494	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTGGTGGAGTCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	4288881	4301420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4299342_4299425_4299747_4300266_4300382_4300466
ES.32408.5	chr8	+	2930	15	NIC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	-102	-3	intron_retention	FALSE	canonical	0	0	junction_11	135.36174134669	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTGGTGGAGTCAAT	NA	False	NA	NA	False	AATAAA	-13	NA	4288762	4301420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4299204_4299342_4299425_4299747_4300266_4300382_4300466
ES.32408.50	chr8	+	5254	17	NNC	ENSMUSG00000109061.2	novel	2879	16	NA	NA	23	-2	intron_retention	FALSE	canonical	0	0	junction_11	145.036148511328	406	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGGTGGAGTCAATA	NA	False	NA	NA	False	AATAAA	-14	NA	4288887	4301421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4296162_4299342_4299425_4299747_4300266_4300382_4300466_4300626_4300848_4300922_4301292
ES.32408.51	chr8	+	5292	9	NIC	ENSMUSG00000002948.20	novel	1188	10	NA	NA	1190	-8	intron_retention	FALSE	canonical	3	277	junction_8	24.3823706804732	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4291294	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.52	chr8	+	3780	8	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	-343	0	intron_retention	FALSE	canonical	3	287	junction_5	22.5162073146597	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4292920	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542
ES.32408.6	chr8	+	7984	8	NIC	ENSMUSG00000002948.20	novel	1188	10	NA	NA	2	-8	intron_retention	FALSE	canonical	3	271	junction_4	28.517806825253	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCGAGTCTGGTGTCC	NA	False	NA	11	True	AATAAA	-12	NA	4288762	4297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4293446_4293552_4293620_4293742_4293857_4293950_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.7	chr8	+	3551	10	ISM	ENSMUSG00000002948.20	ENSMUST00000110999.8	1578	12	-36	0	32	0	intron_retention	FALSE	canonical	3	271	junction_7	24.5558069368732	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288792	4297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542
ES.32408.8	chr8	+	4699	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110994.9	1600	11	-1311	-1788	33	0	multi-exon	FALSE	canonical	0	0	junction_1	94.8251548904614	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288793	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4290290_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ES.32408.9	chr8	+	3300	10	NIC	ENSMUSG00000002948.20	novel	3497	11	NA	NA	33	0	intron_retention	FALSE	canonical	3	16	junction_8	93.9027603165196	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288793	4297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4295542_4295589_4295694
ES.32409.1	chr8	+	2686	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	-1148	-2	-1148	2	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCCCCCTTTGACAT	NA	False	NA	18	True	AATAAA	-18	NA	4301931	4306222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
ES.3241.1	chr10	-	173	1	Intergenic	novelGene_2535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGATTGTAACT	NA	False	NA	NA	False	NA	NA	NA	78622546	78622373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78622400_78622500
ES.32410.1	chr8	+	180	1	Intergenic	novelGene_26446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	4322230	4322410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4322200_4322400
ES.32411.1	chr8	+	3165	1	Intergenic	novelGene_26452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCCTGCCTACTGCC	NA	False	NA	NA	False	NA	NA	NA	4346460	4349625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4346500_4349600
ES.32411.2	chr8	+	3347	1	Intergenic	novelGene_26453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGAACGTATCTGAG	NA	False	NA	NA	False	NA	NA	NA	4346460	4349807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4346500_4349800
ES.32411.3	chr8	+	2075	1	Intergenic	novelGene_26451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAACCAACCAACCAACC	NA	False	NA	NA	False	NA	NA	NA	4346460	4348535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4346500_4348500
ES.32412.1	chr8	+	1911	3	FSM	ENSMUSG00000023235.15	ENSMUST00000153254.3	362	3	-41	-1508	-10	0	multi-exon	FALSE	canonical	3	5	junction_2	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCTTGGATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4375199	4384807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4375289_4377756_4377894_4383122
ES.32412.2	chr8	+	4252	10	NNC	ENSMUSG00000023235.15	novel	867	8	NA	NA	8	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.27460789418261	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAACTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	4375217	4409976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4375412_4377756_4377894_4383122_4385205_4385446_4386221_4386407_4386527_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ES.32412.3	chr8	+	589	4	NNC	ENSMUSG00000023235.15	novel	362	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.04155872120988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCTTGGATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4375226	4384807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4375289_4377756_4377894_4383122_4383237_4384531
ES.32412.4	chr8	+	7117	2	ISM	ENSMUSG00000023235.15	ENSMUST00000153254.3	362	3	-14	-1512	0	4	intron_retention	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGATGTTTGTGTAA	NA	False	NA	NA	False	NA	NA	NA	4375226	4384811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_4375289_4377756
ES.32412.5	chr8	+	579	4	NNC	ENSMUSG00000023235.15	novel	362	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	5.79271573232759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTCTTGGATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	4375230	4384807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4375289_4377756_4377894_4383122_4383231_4384531
ES.32412.6	chr8	+	5130	1	FSM	ENSMUSG00000023235.15	ENSMUST00000207839.2	2461	1	19	-2688	11	2688	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGATCCCAGTTGCTA	NA	False	NA	NA	False	AAGAAA	-5	NA	4375251	4380381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4375300_4380400
ES.32412.7	chr8	+	1938	1	Intergenic	novelGene_26455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATTG	NA	False	NA	NA	False	NA	NA	NA	4390470	4392408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4390500_4392400
ES.32412.8	chr8	+	1023	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	-9	44	-9	-22	multi-exon	FALSE	canonical	2	8	junction_1	5.67097875150313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAACTTAAAAA	7904	False	NA	NA	False	NA	NA	NA	4399578	4409976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ES.32412.9	chr8	+	875	5	NIC	ENSMUSG00000023235.15	novel	1058	6	NA	NA	16	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.69985632065266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAACTTAAAAA	7929	False	NA	NA	False	NA	NA	NA	4399603	4409976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4399656_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ES.32413.1	chr8	-	4663	14	Fusion	ENSMUSG00000048644.9_ENSMUSG00000002949.16	novel	1790	13	NA	NA	7	15	multi-exon	TRUE	canonical	0	0	junction_5	195.852981934267	315	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTGTTCTTAGCCTGT	NA	False	NA	-1	True	NA	NA	NA	4325906	4307644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_4308648_4309050_4310256_4310511_4310623_4311907_4311998_4315225_4316474_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.10	chr8	-	2085	12	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	6	5	intron_retention	FALSE	canonical	3	458	junction_5	35.7830931036728	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTTTGAAGTGTACCTC	NA	False	NA	-8	True	AATAAA	-27	NA	4325907	4309725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.12	chr8	-	2138	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	199.596728847611	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGGTTTGAAGTGTACC	NA	False	NA	-10	True	AATAAA	-25	NA	4325947	4309727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.13	chr8	-	1636	12	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	160.239283882491	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325931	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4324136_4324233_4325842
ES.32413.14	chr8	-	3089	12	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	458	junction_4	36.8346764398678	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325928	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.15	chr8	-	3034	12	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	8	-1	intron_retention	FALSE	canonical	1	1	junction_3	159.067634661154	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325905	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4311998_4315225_4315277_4316587_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.17	chr8	-	1748	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	153.444796443397	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325904	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316587_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.19	chr8	-	1860	12	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	458	junction_5	33.6697622884686	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325897	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.2	chr8	-	4140	12	Fusion	ENSMUSG00000048644.9_ENSMUSG00000002949.16	novel	1790	13	NA	NA	-2	12	intron_retention	FALSE	canonical	0	0	junction_7	160.009813748619	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCTGTTCTTAGCC	NA	False	NA	-4	True	NA	NA	NA	4325887	4307647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317770_4317859_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.20	chr8	-	2561	17	Fusion	ENSMUSG00000002949.16_ENSMUSG00000040028.11	novel	1790	13	NA	NA	30	-1	multi-exon	FALSE	canonical	0	0	junction_12	512.087604657396	1261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4375056	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.21	chr8	-	2466	3	ISM	ENSMUSG00000002949.16	ENSMUST00000141195.2	809	6	3307	-368	-3003	-1	3prime_fragment	FALSE	canonical	3	541	junction_1	9.5	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4313738	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_4310256_4310511_4310623_4311907
ES.32413.23	chr8	-	4643	10	NIC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	9	-1	intron_retention	FALSE	canonical	3	12	junction_6	171.207115924572	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325904	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4311998_4315225_4316681_4316769_4316863_4317254_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.24	chr8	-	2457	11	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	12	junction_7	165.69900422151	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325890	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.25	chr8	-	1889	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.810393115233	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAACGGTTTGAAGTG	NA	False	NA	-14	True	AATAAA	-21	NA	4325904	4309731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315383_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.27	chr8	-	1717	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	154.311981064336	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGAACGGTTTGAAG	NA	False	NA	-16	True	AATAAA	-19	NA	4325897	4309733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310569_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.29	chr8	-	6150	10	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	8	-5	intron_retention	FALSE	canonical	0	0	junction_5	173.660588505279	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTTTGAACGGTTTGA	NA	False	NA	-18	True	AATAAA	-17	NA	4325905	4309735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.3	chr8	-	7430	7	Fusion	ENSMUSG00000048644.9_ENSMUSG00000002949.16	novel	3041	12	NA	NA	9	-17	intron_retention	FALSE	canonical	3	458	junction_2	38.7212258759112	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGCATGTGAAGCAGAT	NA	False	NA	-33	True	AATAAA	-17	NA	4325904	4307676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_4311998_4315225_4316681_4316769_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.30	chr8	-	5114	10	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-177	-7	intron_retention	FALSE	canonical	3	12	junction_7	173.448110147042	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGTTTGAACGGTTT	NA	False	NA	-20	True	AATAAA	-15	NA	4326090	4309737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136
ES.32413.31	chr8	-	1955	14	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-8866	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	199.685314562867	325	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGTTTGAACGGTTT	NA	False	NA	-20	True	AATAAA	-15	NA	4334779	4309737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319858_4320026_4324136_4324233_4325842_4325966_4334655
ES.32413.32	chr8	-	1769	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	206.17729358222	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGTTTGAACGGTTT	NA	False	NA	-20	True	AATAAA	-15	NA	4325905	4309737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316678_4316769_4316863_4317254_4317341_4317636_4317770_4317859_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.33	chr8	-	3006	12	NNC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	3	-9	intron_retention	FALSE	canonical	2	2	junction_2	208.76294437028	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	False	NA	-22	True	AATAAA	-13	NA	4325910	4309739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310569_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.34	chr8	-	3362	12	NNC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	6	-9	intron_retention	FALSE	canonical	3	25	junction_2	152.337706624145	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	False	NA	-22	True	AATAAA	-13	NA	4325907	4309739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.35	chr8	-	3732	10	NIC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	-9	-9	intron_retention	FALSE	canonical	3	12	junction_6	171.657928580198	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	False	NA	-22	True	AATAAA	-13	NA	4325894	4309739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.36	chr8	-	2155	11	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	9	-9	intron_retention	FALSE	canonical	3	458	junction_5	34.2211922644434	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	False	NA	-22	True	AATAAA	-13	NA	4325904	4309739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.38	chr8	-	2082	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	153.714630077947	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	False	NA	-22	True	AATAAA	-13	NA	4325897	4309739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316238_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.39	chr8	-	1882	1	Intergenic	novelGene_26447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	4330383	4328501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4328500_4330400
ES.32413.4	chr8	-	3362	15	Fusion	ENSMUSG00000048644.9_ENSMUSG00000002949.16	novel	1790	13	NA	NA	7	-17	multi-exon	FALSE	canonical	0	0	junction_2	220.858956285292	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGCATGTGAAGCAGAT	NA	False	NA	-33	True	AATAAA	-17	NA	4325906	4307676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_4308648_4309050_4309284_4309663_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.40	chr8	-	3400	1	Intergenic	novelGene_26448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGCATTAGAACACAAGC	NA	False	NA	NA	False	NA	NA	NA	4333938	4330538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4330500_4333900
ES.32413.41	chr8	-	7998	1	Genic_Genomic	ENSMUSG00000040028.11	novel	NA	NA	NA	NA	22833	3593	mono-exon	FALSE	NA	NA	NA	NA	NA	942	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCTTGGAGTCCACTT	NA	False	NA	NA	False	NA	NA	NA	4339786	4331788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_4331800_4339800
ES.32413.42	chr8	-	6012	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	333	-602	6	602	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGGTGTAGGGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	4375080	4334779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.43	chr8	-	5808	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	334	-399	7	399	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAGACATTTTAATTCA	NA	False	NA	-13	True	ATTAAA	-15	NA	4375079	4334982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.44	chr8	-	5963	8	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	35	394	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	808.566178680584	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGTGTAGACATTTTA	NA	False	NA	-18	True	ATTAAA	-10	NA	4375051	4334987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4372702_4372833_4374885
ES.32413.45	chr8	-	5468	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	293	-18	-34	18	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGGATGTTTATGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	4375120	4335363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.46	chr8	-	5467	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCCATTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	4375079	4335381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.47	chr8	-	5265	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	30	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	625.804127148068	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAAAGTGAATCCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	4375056	4335390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4335584_4335695_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.48	chr8	-	5220	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	19	-9	at_least_one_novel_splicesite	FALSE	canonical	2	122	junction_1	752.127010550745	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAAAGTGAATCCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	4375067	4335390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.49	chr8	-	2847	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	-63	2959	-63	2	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTTGTTTT	NA	False	NA	1	True	ATTAAA	-23	NA	4375476	4338340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.50	chr8	-	2530	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTTGTTTT	NA	False	NA	1	True	ATTAAA	-23	NA	4375101	4338340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.51	chr8	-	2659	8	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	808.566178680584	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	4375101	4338341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4372702_4372833_4374885
ES.32413.52	chr8	-	5518	5	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	25	0	intron_retention	FALSE	canonical	3	1349	junction_4	158.684238347733	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375061	4338342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4339925_4345335_4345562_4351684_4355031_4361598_4361787_4374885
ES.32413.53	chr8	-	2839	9	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	830.892855607749	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375069	4338342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4370517_4370731_4372702_4372833_4374885
ES.32413.54	chr8	-	5593	6	NNC	ENSMUSG00000040028.11	novel	2317	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	192	junction_5	739.545157512373	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375078	4338342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.55	chr8	-	2640	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	804.178203716896	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375030	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4371028_4371271_4374885
ES.32413.56	chr8	-	2287	5	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	2	92	junction_2	659.514357311499	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375073	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4339925_4345335_4345562_4354926_4355031_4361598_4361787_4374885
ES.32413.57	chr8	-	2747	8	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	811.553335478655	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375079	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4371028_4371271_4374885
ES.32413.59	chr8	-	2278	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	2	122	junction_1	752.127010550745	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375078	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.6	chr8	-	6292	11	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-10	7	intron_retention	FALSE	canonical	3	458	junction_3	38.3339275316266	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTGAAGTGTACCTCTC	NA	False	NA	-6	True	AATAAA	-29	NA	4325895	4309723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.60	chr8	-	2363	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_2	750.203599031623	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375091	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.61	chr8	-	2600	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	776.556072240333	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375078	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4355853_4356008_4361598_4361787_4374885
ES.32413.62	chr8	-	2399	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	665.337087497759	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375045	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355024_4361605_4361787_4374885
ES.32413.63	chr8	-	2193	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	659.888475425962	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	False	NA	-2	True	ATTAAA	-20	NA	4375032	4338343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345454_4351783_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.64	chr8	-	2362	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	140	junction_2	605.221281846566	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTGTTTTGTTTTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	4375085	4338344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345472_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.65	chr8	-	2220	5	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	2	122	junction_1	652.396878824539	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTGTTTTGTTTTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	4375079	4338344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4339925_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.68	chr8	-	2518	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	763.791420044329	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTGTTTTGTTTTTTG	NA	False	NA	-3	True	ATTAAA	-19	NA	4375058	4338344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4350414_4350508_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.69	chr8	-	2400	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	46	junction_5	752.811102173417	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTTTTGTTTTGTTTTTT	NA	False	NA	-4	True	ATTAAA	-18	NA	4375079	4338345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361684_4362556_4362615_4374885
ES.32413.70	chr8	-	3221	10	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	832.505247823893	930	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTTTTGTTTTGTTTTTT	NA	False	NA	-4	True	ATTAAA	-18	NA	4375078	4338345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4370517_4370731_4371071_4371271_4372702_4373010_4374885
ES.32413.72	chr8	-	8045	1	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	16229	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTTTTGTTTTGTTTTTT	NA	False	NA	-4	True	ATTAAA	-18	NA	4346390	4338345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4338300_4346400
ES.32413.74	chr8	-	1655	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	30	-828	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTGTTTTAGTTTT	NA	False	NA	NA	False	TTTAAA	-25	NA	4375056	4339170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.75	chr8	-	1618	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	336	3789	9	-828	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTGTTTTAGTTTT	NA	False	NA	NA	False	TTTAAA	-25	NA	4375077	4339170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.76	chr8	-	1462	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	356	3925	29	-964	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCGCTGACTAACCAGT	NA	False	NA	-2	True	ATTAAA	-15	NA	4375057	4339306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.77	chr8	-	1511	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	27	-975	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGAAGTAGACTGCGCT	NA	False	NA	-13	True	ATTAAA	-4	NA	4375059	4339317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.78	chr8	-	1414	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	303	4026	-24	-1065	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGACATGTTCAAATGCT	NA	False	NA	-103	True	NA	NA	NA	4375110	4339407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.79	chr8	-	1376	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-21	-1158	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGTGTACAACTCA	NA	False	NA	NA	False	AATAGA	-28	NA	4375107	4339500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
ES.32413.8	chr8	-	2074	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	153.714630077947	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTTTGAAGTGTACCTC	NA	False	NA	-8	True	AATAAA	-27	NA	4325893	4309725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316256_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32413.80	chr8	-	1075	5	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	-10	-1164	combination_of_known_splicesites	FALSE	canonical	2	122	junction_1	652.396878824539	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTGTTAGTGTAC	NA	False	NA	NA	False	AATAGA	-22	NA	4375096	4339506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4339925_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ES.32413.81	chr8	-	1293	1	Intergenic	novelGene_26449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGTCAGTTTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	4341412	4340119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4340100_4341400
ES.32413.82	chr8	-	3598	1	Intergenic	novelGene_26450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	885	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGAAATGCTATTTG	NA	False	NA	NA	False	AAGAAA	-5	NA	4349413	4345815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4345800_4349400
ES.32413.9	chr8	-	3365	11	NIC	ENSMUSG00000002949.16	novel	3041	12	NA	NA	5	5	intron_retention	FALSE	canonical	3	458	junction_4	35.296033771516	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTTTGAAGTGTACCTC	NA	False	NA	-8	True	AATAAA	-27	NA	4325908	4309725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ES.32414.1	chr8	-	4332	1	Intergenic	novelGene_26454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4390899	4386567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4386600_4390900
ES.32415.1	chr8	-	174	1	Intergenic	novelGene_26456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	4397200	4397026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4397000_4397200
ES.32416.1	chr8	-	746	1	Intergenic	novelGene_26457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4405206	4404460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4404500_4405200
ES.32416.2	chr8	-	177	2	Intergenic	novelGene_26458	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	4432533	4405027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4405042_4432370
ES.32416.3	chr8	-	2360	1	Intergenic	novelGene_26459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTTGCTTATAAGACCA	NA	False	NA	NA	False	ATTAAA	-13	NA	4422258	4419898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4419900_4422300
ES.32416.4	chr8	-	182	1	Intergenic	novelGene_26460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4432540	4432358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4432400_4432500
ES.32417.1	chr8	+	184	1	Intergenic	novelGene_26461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAGCCACAAATAA	NA	False	NA	NA	False	NA	NA	NA	4511009	4511193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_4511000_4511200
ES.32418.1	chr8	+	3952	12	NIC	ENSMUSG00000008206.17	novel	9475	11	NA	NA	-20	1191	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	16.2942975372185	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATCGTATAAGGATCAA	NA	False	NA	NA	False	NA	NA	NA	4543119	4576313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4543170_4543404_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.10	chr8	+	3310	8	NIC	ENSMUSG00000008206.17	novel	2539	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	45	junction_7	6.1145527311522	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGAATTCTCTGCGCCAG	NA	False	NA	10	True	AATAAA	-11	NA	4543482	4574050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.11	chr8	+	2177	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	287	7011	4	-453	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGCAGAGCCTGGCA	NA	False	NA	-1	True	AATAAA	-11	NA	4543485	4574669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.12	chr8	+	4043	10	NNC	ENSMUSG00000008206.17	novel	9475	11	NA	NA	4	1183	intron_retention	FALSE	canonical	1	1	junction_9	17.6886655485621	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTACTAGTATCGTATA	NA	False	NA	NA	False	NA	NA	NA	4543485	4576305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571418_4573353
ES.32418.13	chr8	+	3461	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	307	5707	-15	851	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGACCTTACTAATAAC	NA	False	NA	NA	False	AATAAA	-11	NA	4543505	4575973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.14	chr8	+	1774	1	ISM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	30781	5927	30404	631	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	4573979	4575753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_4574000_4575800
ES.32418.2	chr8	+	2133	10	NIC	ENSMUSG00000008206.17	novel	9475	11	NA	NA	21	4	intron_retention	FALSE	canonical	3	44	junction_6	6.16641641133849	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTGCGCCAGAGCTT	NA	False	NA	15	True	AATAAA	-16	NA	4543160	4574055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.3	chr8	+	3261	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	116	6098	116	460	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATATATTTATAAGTTA	NA	False	NA	NA	False	GATAAA	-20	NA	4543314	4575582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.4	chr8	+	3302	9	FSM	ENSMUSG00000008206.17	ENSMUST00000175781.5	2539	9	-138	-625	116	-446	multi-exon	FALSE	canonical	3	45	junction_8	5.7227615711298	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGCCTGGCATGGTGAC	NA	False	NA	6	True	AATAAA	-18	NA	4543314	4574676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.5	chr8	+	3137	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	124	6214	124	344	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGGATATAACTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	4543322	4575466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.6	chr8	+	3791	10	NIC	ENSMUSG00000008206.17	novel	9475	11	NA	NA	-122	0	intron_retention	FALSE	canonical	3	44	junction_6	6.67406996341387	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAATTCTCTGCGCCAGA	NA	False	NA	11	True	AATAAA	-12	NA	4543326	4574051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4573511_4573603
ES.32418.7	chr8	+	7141	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	260	2074	1	-2074	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACTATAATGTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	4543458	4579606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.8	chr8	+	1581	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	269	7625	10	4	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTGCGCCAGAGCTT	NA	False	NA	15	True	AATAAA	-16	NA	4543467	4574055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32418.9	chr8	+	4315	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	283	4877	0	1681	multi-exon	FALSE	canonical	3	44	junction_6	6.51459898996093	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTTCCAACTTTTGA	NA	False	NA	NA	False	NA	NA	NA	4543481	4576803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ES.32419.1	chr8	-	6162	1	Intergenic	novelGene_26462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGTTAGTGAG	NA	False	NA	NA	False	NA	NA	NA	4551122	4544960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4545000_4551100
ES.3242.1	chr10	-	7247	2	Intergenic	novelGene_2536	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACCTCAGCCTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	78882182	78874411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_78876566_78877089
ES.32420.1	chr8	+	4855	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-32	2341	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTTGGATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	4663134	4682572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.10	chr8	+	3643	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-6	1155	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGTCTTAACTGCTT	NA	False	NA	NA	False	AAAACA	-18	NA	4663160	4681386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.11	chr8	+	4576	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-4	2090	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATATACTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	4663162	4682321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.12	chr8	+	4418	4	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	16	2093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1948335455118	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTGCTTTTTTATG	NA	False	NA	NA	False	AATAAA	-20	NA	4663182	4682324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663256_4675839_4675967_4676163_4676225_4678167
ES.32420.13	chr8	+	1775	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	24	168	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATGTGGTAAAGTCTT	NA	False	NA	4	True	NA	NA	NA	4663190	4679548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.14	chr8	+	1712	4	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	24	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1948335455118	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATGTGGTAAAGTCTT	NA	False	NA	4	True	NA	NA	NA	4663190	4679548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663334_4675839_4675967_4676163_4676225_4678167
ES.32420.15	chr8	+	3128	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	49	640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4940640489636	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTTGACTTATGGT	NA	False	NA	NA	False	NA	NA	NA	4663215	4680871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663334_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.2	chr8	+	1715	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-32	681	-32	170	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGGTAAAGTCTTTG	NA	False	NA	6	True	NA	NA	NA	4663134	4679550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32420.3	chr8	+	3024	4	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-32	651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.1948335455118	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGGTTCCATGGGGCT	NA	False	NA	NA	False	NA	NA	NA	4663134	4680882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663256_4675839_4675967_4676163_4676225_4678167
ES.32420.4	chr8	+	4737	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-32	-2341	-32	2341	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTTGGATTTCATCT	NA	False	NA	NA	False	NA	NA	NA	4663134	4682572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32420.5	chr8	+	3154	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	-32	640	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATTTGACTTATGGT	NA	False	NA	NA	False	NA	NA	NA	4663134	4680871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
ES.32420.6	chr8	+	4487	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-30	-2093	-30	2093	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTGCTTTTTTATG	NA	False	NA	NA	False	AATAAA	-20	NA	4663136	4682324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32420.7	chr8	+	1193	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-28	1199	-28	-348	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGAATGCAATCA	NA	False	NA	NA	False	NA	NA	NA	4663138	4679032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32420.8	chr8	+	3940	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-6	-1570	-6	1570	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGGCGTTTTCATCT	NA	False	NA	NA	False	AGTAAA	-16	NA	4663160	4681801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32420.9	chr8	+	3004	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	-6	-634	-6	634	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTTAATTTGACT	NA	False	NA	NA	False	NA	NA	NA	4663160	4680865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ES.32421.1	chr8	-	3247	2	Antisense	novelGene_ENSMUSG00000058748.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACAGCGACTAAACCA	7867	False	NA	NA	False	NA	NA	NA	4670480	4667009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_4669995_4670218
ES.32421.2	chr8	-	3245	2	Antisense	novelGene_ENSMUSG00000058748.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACAGCGACTAAACCA	7868	False	NA	NA	False	NA	NA	NA	4670479	4667009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_4669989_4670213
ES.32422.1	chr8	-	3775	1	FSM	ENSMUSG00000048484.5	ENSMUST00000058918.5	827	1	-247	-2701	-247	2701	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTGTGATGCTTAT	NA	False	NA	NA	False	AGTAAA	-16	NA	4728612	4724837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4724800_4728600
ES.32423.1	chr8	-	3797	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-10	-1631	3	1631	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCCTCTGCTCATCAG	NA	False	NA	NA	False	AATAAA	-20	NA	4829564	4784344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.10	chr8	-	2278	10	NNC	ENSMUSG00000022322.9	novel	2365	12	NA	NA	11475	-2	intron_retention	FALSE	canonical	0	0	junction_6	100.09230307972	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGTGTGAAATGTGGA	723	False	NA	-7	True	TATAAA	-13	NA	4818001	4785977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4799442_4799551_4799786_4804219_4804313_4814880_4815090_4817906
ES.32423.11	chr8	-	2132	13	NNC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	86.6458308287248	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGTGTGAAATGTGG	NA	False	NA	-8	True	TATAAA	-12	NA	4829539	4785978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817912_4818023_4818143_4818312_4829420
ES.32423.12	chr8	-	1859	11	NIC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	93.9425356268395	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTGTGTGAAATGT	NA	False	NA	-10	True	TATAAA	-10	NA	4829546	4785980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4829420
ES.32423.13	chr8	-	172	1	Intergenic	novelGene_26463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAGCATGA	NA	False	NA	NA	False	NA	NA	NA	4793935	4793763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_4793800_4793900
ES.32423.14	chr8	-	2032	4	ISM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	3	27240	3	-2	5prime_fragment	FALSE	canonical	3	272	junction_2	23.7205958328763	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATAGGCACTGATATA	NA	False	NA	NA	False	TATAAA	-19	NA	4829548	4813469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.15	chr8	-	693	4	ISM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	5	28577	5	-195	5prime_fragment	FALSE	canonical	3	272	junction_2	23.7205958328763	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTCTTTTTTTCTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	4829546	4814806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.2	chr8	-	3470	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	8	-1322	5	1322	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTCTCTCTTTCTTGC	NA	False	NA	NA	False	AAGAAA	-43	NA	4829546	4784653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.3	chr8	-	2197	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	-34	-7	-21	7	multi-exon	FALSE	canonical	3	204	junction_9	39.0672497112351	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTGGATTTATTTCT	NA	False	NA	2	True	TATAAA	-22	NA	4829588	4785968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.4	chr8	-	2616	12	FSM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	5	-256	5	2	multi-exon	FALSE	canonical	3	204	junction_8	40.3396734765956	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGAAATGTGGATTTA	NA	False	NA	-3	True	TATAAA	-17	NA	4829546	4785973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.5	chr8	-	6740	11	NIC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	204	junction_7	41.0175572163921	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	False	NA	-5	True	TATAAA	-15	NA	4829546	4785975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.6	chr8	-	2306	14	NNC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	110.269867992041	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTGTGAAATGTGGAT	NA	False	NA	-6	True	TATAAA	-14	NA	4829548	4785976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804332_4806076_4806215_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.7	chr8	-	2067	13	NNC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	86.6701922359829	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGTGTGAAATGTGGA	NA	False	NA	-7	True	TATAAA	-13	NA	4829546	4785977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798747_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32423.9	chr8	-	2084	13	NNC	ENSMUSG00000022322.9	novel	2156	13	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.7133335838281	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTGTGTGAAATGTGGA	NA	False	NA	-7	True	TATAAA	-13	NA	4829547	4785977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794509_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ES.32424.1	chr8	+	228	1	Intergenic	novelGene_26464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	51	True	AATAAA	-40	NA	5691062	5691290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_5691100_5691300
ES.32425.1	chr8	+	174	1	Intergenic	novelGene_26465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	6423275	6423449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_6423300_6423400
ES.32426.1	chr8	-	1241	3	Intergenic	novelGene_26466	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGCTATGTCATCCT	NA	False	NA	NA	False	AATAAA	-25	NA	6990738	6967710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_6968654_6981964_6982097_6990572
ES.32427.1	chr8	-	173	1	Intergenic	novelGene_26467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGATTA	NA	False	NA	NA	False	NA	NA	NA	7224073	7223900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_7223900_7224100
ES.32428.1	chr8	-	108	1	FSM	ENSMUSG00000119145.1	ENSMUST00000239699.1	107	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTTCCACCATCCA	NA	False	NA	NA	False	NA	NA	NA	7478327	7478219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_7478200_7478300
ES.32429.1	chr8	+	175	1	Intergenic	novelGene_26468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGCAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	7555226	7555401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_7555200_7555400
ES.3243.1	chr10	+	5257	3	Antisense	novelGene_ENSMUSG00000060301.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78913677	78929206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_78916086_78922325_78924216_78928247
ES.32430.1	chr8	+	151	1	Intergenic	novelGene_26469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	8530665	8530816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_8530700_8530800
ES.32431.1	chr8	+	160	1	Intergenic	novelGene_26470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	8677493	8677653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_8677500_8677700
ES.32432.1	chr8	-	4792	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTTCAAAGTATTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	8711241	8667433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
ES.32432.2	chr8	-	6140	4	NIC	ENSMUSG00000001300.17	novel	4793	5	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGCGCCTTCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	8711241	8667439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8672445_8673147_8673241_8689205_8689490_8710483
ES.32432.3	chr8	-	4377	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	-41	457	-41	-457	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGACAGTAATGGCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	8711283	8667890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
ES.32433.1	chr8	+	6996	1	Antisense	novelGene_ENSMUSG00000040459.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAGGCCATATTATCTT	NA	False	NA	NA	False	NA	NA	NA	8729322	8736318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_8729300_8736300
ES.32434.1	chr8	+	176	1	Intergenic	novelGene_26471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATGTGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	8737607	8737783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_8737600_8737800
ES.32435.1	chr8	-	3233	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-34	-2	-34	2	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTGAGGACTCTTTC	5221	False	NA	NA	False	TATAAA	-18	NA	8740555	8715072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ES.32435.10	chr8	-	1914	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	3	275	at_least_one_novel_splicesite	FALSE	non_canonical	2	32	junction_4	368.642781022496	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACAGAATATTGTTA	5258	False	NA	NA	False	AATAAA	-19	NA	8740518	8716300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740105_8740158
ES.32435.11	chr8	-	4041	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-444	-38	-27	38	multi-exon	FALSE	canonical	3	891	junction_2	32	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGGTTTCCTTTTAGA	5228	False	NA	27	True	NA	NA	NA	8740548	8716537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8733974_8739976
ES.32435.12	chr8	-	1751	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-54	1500	-54	1	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAGCAATTTTTATT	5201	False	NA	-10	True	AATAAA	-36	NA	8740575	8716574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ES.32435.13	chr8	-	1649	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	382.237491620066	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTAAGCAATTTTTATT	5248	False	NA	-10	True	AATAAA	-36	NA	8740528	8716574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740111_8740165
ES.32435.14	chr8	-	10005	1	NIC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	5683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	NA	False	NA	-11	True	AATAAA	-35	NA	8726580	8716575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8716600_8726600
ES.32435.15	chr8	-	3839	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	435.890149260364	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5248	False	NA	-11	True	AATAAA	-35	NA	8740528	8716575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8739976_8740105_8740248
ES.32435.16	chr8	-	3920	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	2	0	intron_retention	FALSE	non_canonical	2	32	junction_3	420.833300330032	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5257	False	NA	-11	True	AATAAA	-35	NA	8740519	8716575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8739976_8740105_8740158
ES.32435.17	chr8	-	3913	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	435.890149260364	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5262	False	NA	-11	True	AATAAA	-35	NA	8740514	8716575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8739976_8740113_8740168
ES.32435.18	chr8	-	3603	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	435.890149260364	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5244	False	NA	-11	True	AATAAA	-35	NA	8740532	8716575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8731851_8733974_8739976
ES.32435.2	chr8	-	3166	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-21	2	at_least_one_novel_splicesite	TRUE	non_canonical	2	32	junction_4	368.642781022496	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTGAGGACTCTTTC	5234	False	NA	NA	False	TATAAA	-18	NA	8740542	8715072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740105_8740158
ES.32435.20	chr8	-	1661	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	32	junction_4	368.642781022496	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5235	False	NA	-12	True	AATAAA	-34	NA	8740541	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740105_8740158
ES.32435.21	chr8	-	1764	5	NIC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	456.383815992636	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5244	False	NA	-12	True	AATAAA	-34	NA	8740532	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8717417_8731383_8731468_8731890_8731949_8733747_8733974_8739976
ES.32435.22	chr8	-	1239	4	NNC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	408.778940531704	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5244	False	NA	-12	True	AATAAA	-34	NA	8740532	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8740443
ES.32435.23	chr8	-	1879	6	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	451.332870506902	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5275	False	NA	-12	True	AATAAA	-34	NA	8740501	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8731840_8731949_8732967_8733064_8733747_8733974_8739976
ES.32435.24	chr8	-	3518	3	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	5	junction_2	475	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5245	False	NA	-12	True	AATAAA	-34	NA	8740531	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8740443
ES.32435.25	chr8	-	2154	4	NIC	ENSMUSG00000040459.12	novel	970	5	NA	NA	22	-1	intron_retention	FALSE	canonical	3	23	junction_2	425.067837723188	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5277	False	NA	-12	True	AATAAA	-34	NA	8740499	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8717417_8731383_8731949_8733747_8733974_8739976
ES.32435.26	chr8	-	1549	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	382.237491620066	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5259	False	NA	-12	True	AATAAA	-34	NA	8740517	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740105_8740246
ES.32435.27	chr8	-	1810	5	FSM	ENSMUSG00000040459.12	ENSMUST00000207817.2	970	5	-217	-623	-7	-1	multi-exon	FALSE	canonical	3	8	junction_2	454.344789229501	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5248	False	NA	-12	True	AATAAA	-34	NA	8740528	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8731468_8731840_8731949_8733747_8733974_8739976
ES.32435.29	chr8	-	3920	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	435.890149260364	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5259	False	NA	-12	True	AATAAA	-34	NA	8740517	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8739976_8740111_8740161
ES.32435.30	chr8	-	3552	4	NIC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	435.890149260364	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5255	False	NA	-12	True	AATAAA	-34	NA	8740521	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8717417_8731383_8731468_8731890_8733974_8739976
ES.32435.31	chr8	-	3453	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	45	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	454.20507482854	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTAAGCAATTTTTA	5300	False	NA	-12	True	AATAAA	-34	NA	8740476	8716576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8731890_8733974_8739976_8740105_8740158
ES.32435.34	chr8	-	3613	4	NIC	ENSMUSG00000040459.12	novel	970	5	NA	NA	-27	-17	intron_retention	FALSE	canonical	3	8	junction_2	432.125753301821	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTCTTAAATTCATAT	5228	False	NA	-28	True	AATAAA	-18	NA	8740548	8716592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8717417_8731383_8731468_8731840_8733974_8739976
ES.32435.35	chr8	-	3379	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-435	615	-18	9	multi-exon	FALSE	canonical	3	891	junction_2	32	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGGTTTTTTTGTTTT	5237	False	NA	4	True	AAGAAA	-32	NA	8740539	8717190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8733974_8739976
ES.32435.36	chr8	-	3284	4	NNC	ENSMUSG00000040459.12	novel	3559	3	NA	NA	16	2	intron_retention	FALSE	non_canonical	2	32	junction_3	420.833300330032	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTGAAGTGGTTTTT	5271	False	NA	-3	True	AAGAAA	-25	NA	8740505	8717197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8733974_8739976_8740105_8740158
ES.32435.37	chr8	-	1076	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	-5	2126	-5	-1	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCATGTTGAAGTGGTT	5250	False	NA	-6	True	AAGAAA	-22	NA	8740526	8717200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ES.32435.38	chr8	-	3164	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-394	789	23	-16	multi-exon	FALSE	canonical	3	891	junction_2	32	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATGAAACTAGAACAAGAA	5278	False	NA	NA	False	AAGAAA	-15	NA	8740498	8717364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8733974_8739976
ES.32435.4	chr8	-	5475	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-414	-1502	3	1	multi-exon	FALSE	canonical	3	891	junction_2	32	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	5258	False	NA	NA	False	TATAAA	-17	NA	8740518	8715073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8733974_8739976
ES.32435.6	chr8	-	3099	3	NIC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	445.5	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTGTGAGGACTCTT	5269	False	NA	NA	False	TATAAA	-16	NA	8740507	8715074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_8717417_8733747_8733974_8739976
ES.32435.7	chr8	-	3825	3	NNC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	39	0	intron_retention	FALSE	non_canonical	0	0	junction_2	477.5	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTGTGAGGACTCTT	5294	False	NA	NA	False	TATAAA	-16	NA	8740482	8715074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8732361_8739976
ES.32435.8	chr8	-	3038	5	NNC	ENSMUSG00000040459.12	novel	970	5	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	382.237491620066	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGGTGTGAGGACTCT	5269	False	NA	NA	False	TATAAA	-15	NA	8740507	8715075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976_8740105_8740248
ES.32435.9	chr8	-	4262	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	-424	-279	-7	279	multi-exon	FALSE	canonical	3	891	junction_2	32	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAATATTGTTACTTT	5248	False	NA	NA	False	AATAAA	-23	NA	8740528	8716296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_8717417_8731383_8733974_8739976
ES.32436.1	chr8	-	127	1	Intergenic	novelGene_26472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8751781	8751654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_8751700_8751800
ES.32437.1	chr8	+	4779	1	FSM	ENSMUSG00000109117.2	ENSMUST00000208349.2	1131	1	-255	-3393	-255	3393	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTCTTTATTTGCTC	NA	False	NA	NA	False	AATAAA	-10	NA	8761228	8766007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_8761200_8766000
ES.32437.2	chr8	+	4500	1	FSM	ENSMUSG00000109117.2	ENSMUST00000208349.2	1131	1	-238	-3131	-238	3131	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTGTTAAATATGTG	NA	False	NA	NA	False	CATAAA	-39	NA	8761245	8765745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_8761200_8765700
ES.32437.3	chr8	+	1791	1	FSM	ENSMUSG00000109117.2	ENSMUST00000208349.2	1131	1	-226	-434	-226	434	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGTTTTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	8761257	8763048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_8761300_8763000
ES.32438.1	chr8	-	128	1	Intergenic	novelGene_26473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATGTACATA	NA	False	NA	NA	False	NA	NA	NA	8856360	8856232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_8856200_8856400
ES.32439.1	chr8	-	216	1	Intergenic	novelGene_26474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGTGTTTGGAGAAT	NA	False	NA	NA	False	NA	NA	NA	9573623	9573407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_9573400_9573600
ES.3244.1	chr10	-	4152	5	NNC	ENSMUSG00000060301.7	novel	4229	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.08503365959205	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	False	NA	0	True	NA	NA	NA	78933444	78900207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78903894_78924120_78924214_78928245_78928339_78930264_78930392_78933291
ES.3244.2	chr10	-	4239	6	FSM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	-10	0	-10	0	multi-exon	FALSE	canonical	1	4	junction_1	2.33238075793812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	False	NA	0	True	NA	NA	NA	78933444	78900207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78933291
ES.3244.4	chr10	-	3852	7	NNC	ENSMUSG00000060301.7	novel	4229	6	NA	NA	147	-488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.12310562561766	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGATGAAACTTGGACT	NA	False	NA	NA	False	NA	NA	NA	78933212	78900695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78931834_78931922_78933045
ES.3244.5	chr10	-	4350	1	FSM	ENSMUSG00000060301.7	ENSMUST00000219729.2	1510	1	-20	-2820	1	2820	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAACCCAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	78933433	78929083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_78929100_78933400
ES.32440.1	chr8	+	83	1	Intergenic	novelGene_26475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	9612548	9612631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_9612500_9612600
ES.32441.1	chr8	-	4131	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	-74	971	-74	857	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAACTTTATGTTCCTTT	NA	False	NA	-4	True	NA	NA	NA	10026373	10020019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_10023808_10026030
ES.32441.2	chr8	-	3331	4	NNC	ENSMUSG00000049717.10	novel	5028	2	NA	NA	-96	855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.09120616516523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCAACTTTATGTTCCT	NA	False	NA	-6	True	NA	NA	NA	10026395	10020021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_10022105_10022624_10023038_10023337_10023808_10026030
ES.32442.1	chr8	+	2932	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	-7	2149	3	-2149	multi-exon	FALSE	canonical	3	144	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGCTATGTAGAATGAC	NA	False	NA	12	True	ATTAAA	-22	NA	10027709	10040006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10037384
ES.32442.10	chr8	+	9998	2	NIC	ENSMUSG00000040396.13	novel	5191	3	NA	NA	27	0	intron_retention	FALSE	canonical	3	35	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027743	10042155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_10032971_10037384
ES.32442.11	chr8	+	4683	3	NNC	ENSMUSG00000040396.13	novel	5191	3	NA	NA	27	-275	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	72	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTCCTCTTAACTAT	NA	False	NA	5	True	AATAAA	-17	NA	10027743	10041880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_10028020_10037384_10037521_10037609
ES.32442.12	chr8	+	5041	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	113	27	-113	multi-exon	FALSE	canonical	3	35	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTGTCAGATAGTTTG	NA	False	NA	12	True	AATAAA	-19	NA	10027743	10042042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32442.13	chr8	+	1844	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	121	3109	121	-3109	multi-exon	FALSE	canonical	3	144	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATAGATGTGCCGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	10027837	10039046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10037384
ES.32442.14	chr8	+	3803	2	ISM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	4081	2151	4071	-2151	3prime_fragment	FALSE	canonical	3	35	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGCTATGTAGAATG	NA	False	NA	10	True	ATTAAA	-20	NA	10031787	10040004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_10032971_10037384
ES.32442.2	chr8	+	4806	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	-7	275	3	-275	multi-exon	FALSE	canonical	3	144	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTCCTCTTAACTAT	NA	False	NA	5	True	AATAAA	-17	NA	10027709	10041880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10037384
ES.32442.3	chr8	+	3035	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	7	2149	-3	-2149	multi-exon	FALSE	canonical	3	35	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGCTATGTAGAATGAC	NA	False	NA	12	True	ATTAAA	-22	NA	10027713	10040006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32442.4	chr8	+	5073	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	1	0	1	0	multi-exon	FALSE	canonical	3	144	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027717	10042155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10037384
ES.32442.5	chr8	+	5178	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	13	0	3	0	multi-exon	FALSE	canonical	3	35	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027719	10042155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32442.6	chr8	+	3224	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	33	1934	23	-1934	multi-exon	FALSE	canonical	3	35	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTGCTGCTTTCT	NA	False	NA	NA	False	ACTAAA	-20	NA	10027739	10040221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32442.7	chr8	+	2046	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	3108	27	-3108	multi-exon	FALSE	canonical	3	35	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAGATGTGCCGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	10027743	10039047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32442.8	chr8	+	4942	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	27	105	27	-105	multi-exon	FALSE	canonical	3	144	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATAGTTTGTACTCAGT	NA	False	NA	20	True	AATAAA	-27	NA	10027743	10042050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10037384
ES.32442.9	chr8	+	4879	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	37	275	27	-275	multi-exon	FALSE	canonical	3	35	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTCCTCTTAACTAT	NA	False	NA	5	True	AATAAA	-17	NA	10027743	10041880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10028020_10032863_10032971_10037384
ES.32443.1	chr8	-	4586	1	Antisense	novelGene_ENSMUSG00000040396.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	10041524	10036938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_10036900_10041500
ES.32444.1	chr8	-	178	1	Intergenic	novelGene_26476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGAAGTATA	NA	False	NA	NA	False	NA	NA	NA	10074474	10074296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_10074300_10074500
ES.32445.1	chr8	+	174	1	Intergenic	novelGene_26477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAATGGGG	NA	False	NA	NA	False	NA	NA	NA	10222157	10222331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_10222200_10222300
ES.32446.1	chr8	+	175	1	Intergenic	novelGene_26478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCCAGGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	10264605	10264780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_10264600_10264800
ES.32447.1	chr8	+	177	1	Intergenic	novelGene_26479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAGAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	10821874	10822051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_10821900_10822100
ES.32448.1	chr8	+	4487	1	FSM	ENSMUSG00000109480.2	ENSMUST00000207377.2	211	1	-4106	-170	-4106	170	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTGTCTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	10975780	10980267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_10975800_10980300
ES.32449.1	chr8	+	3205	1	Genic_Genomic	ENSMUSG00000096938.8	novel	NA	NA	NA	NA	-614	-44096	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAACCTCAAAAGGGT	NA	False	NA	NA	False	AGTAAA	-10	NA	11057235	11060440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_11057200_11060400
ES.3245.1	chr10	+	145	1	Intergenic	novelGene_2537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTTGACTTACCTCC	NA	False	NA	NA	False	NA	NA	NA	79332763	79332908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79332800_79332900
ES.3245.2	chr10	+	602	3	Intergenic	novelGene_2538	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	79332877	79354138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79333161_79339891_79340016_79353943
ES.3245.3	chr10	+	2619	1	Intergenic	novelGene_2539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACAGAAAGCCCACATA	NA	False	NA	NA	False	NA	NA	NA	79348647	79351266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79348600_79351300
ES.32450.1	chr8	-	6841	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	-518	0	-518	0	multi-exon	FALSE	canonical	2	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGATTGGAGGACATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	11058976	11034680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11037015_11054469
ES.32450.2	chr8	-	6576	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	-506	253	-506	-253	multi-exon	FALSE	canonical	2	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTTCTTTGGGTACA	NA	False	NA	NA	False	ATTAAA	-1	NA	11058964	11034933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11037015_11054469
ES.32450.3	chr8	-	913	1	Intergenic	novelGene_26480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAGAGAGAA	NA	False	NA	NA	False	AAAACA	-24	NA	11051800	11050887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_11050900_11051800
ES.32451.1	chr8	+	156	1	Intergenic	novelGene_26481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	11278090	11278246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11278100_11278200
ES.32452.1	chr8	+	6566	48	NNC	ENSMUSG00000031503.14	novel	6450	48	NA	NA	-381	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.77914939007712	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTGTCCCCCGAAT	8099	False	NA	12	True	AATAAA	-22	NA	11362423	11499289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11362848_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.10	chr8	+	5510	39	ISM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	90534	3	-1569	-3	3prime_fragment	FALSE	canonical	3	16	junction_7	6.59996642314971	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTATGTTTTCTGTCCCC	4299	False	NA	7	True	AATAAA	-17	NA	11453338	11499284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.11	chr8	+	4762	28	ISM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	107771	1	15668	-1	3prime_fragment	FALSE	canonical	3	23	junction_2	5.76660838715525	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGTTTTCTGTCCCCCG	5959	False	NA	9	True	AATAAA	-19	NA	11470575	11499286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.12	chr8	+	3919	12	NIC	ENSMUSG00000031503.14	novel	6450	48	NA	NA	-3322	-5	intron_retention	FALSE	canonical	3	24	junction_2	6.43980390851812	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTATGTTTTCTGTCC	9849	False	NA	5	True	AATAAA	-15	NA	11487786	11499282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.3	chr8	+	6711	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	-258	-3	-258	3	multi-exon	FALSE	canonical	3	15	junction_4	6.83737233737166	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTCCCCCGAATC	8222	False	NA	13	True	AATAAA	-23	NA	11362546	11499290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.6	chr8	+	6384	48	NNC	ENSMUSG00000031503.14	novel	6450	48	NA	NA	57	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	7.65099992873228	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGACTATGTTTTCTGT	8537	False	NA	3	True	AATAAA	-13	NA	11362861	11499280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404362_11448667_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ES.32452.8	chr8	+	3186	2	Intergenic	novelGene_26482	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAATAAAGGAAATACC	NA	False	NA	NA	False	NA	NA	NA	11376793	11380060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11378725_11378805
ES.32453.1	chr8	-	6879	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	-271	7	-271	1	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTAGATCATTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	11363097	11248429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.11	chr8	-	6556	52	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	2	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_50	13.487231776459	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGAAGCTTTTATGG	NA	False	NA	NA	False	AATAAA	-11	NA	11362824	11248524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297141_11317596_11317657_11362515
ES.32453.13	chr8	-	5906	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	74	635	-63	461	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAACTGTACTATCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	11362752	11249057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.14	chr8	-	5802	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	52	761	52	335	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAGTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	11362774	11249183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.15	chr8	-	5451	51	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	-58	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	17.1840041899436	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTCTGGGGCGAGAA	NA	False	NA	NA	False	AATAAA	-29	NA	11362747	11249502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266801_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289879_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294575_11295195_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.16	chr8	-	5508	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	19	1088	19	8	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCACTGATGTCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	11362807	11249510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.17	chr8	-	3896	29	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	4895	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	14.4823960696553	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCACTGATGTCTGG	4541	False	NA	NA	False	AATAAA	-21	NA	11277544	11249510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11277412
ES.32453.19	chr8	-	4010	32	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	77619	1206	-2768	-110	3prime_fragment	FALSE	canonical	3	34	junction_31	10.3451366466206	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGCTTCGTTGGCCTCT	NA	False	NA	NA	False	CATAAA	-31	NA	11285207	11249628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094
ES.32453.4	chr8	-	6016	50	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	-17	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	13.8866116879987	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	11362706	11248518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11270348_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.5	chr8	-	4457	20	NIC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	-2965	-88	intron_retention	FALSE	canonical	3	52	junction_18	8.44929474674967	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTTATGGATTTGT	9440	False	NA	NA	False	AATAAA	-17	NA	11270234	11248518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208
ES.32453.8	chr8	-	6310	51	NIC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	17	-89	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	13.7573834721578	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTTTTATGGATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	11362672	11248519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ES.32453.9	chr8	-	2020	7	NNC	ENSMUSG00000031502.12	novel	6615	52	NA	NA	-755	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.7018157594621	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAAGCTTTTATGGA	NA	False	NA	NA	False	AATAAA	-12	NA	11268024	11248523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256311_11267296_11267346_11267433_11267561_11267912
ES.32454.1	chr8	+	176	1	Intergenic	novelGene_26483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11516787	11516963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11516800_11517000
ES.32455.1	chr8	-	1461	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	57	-126	57	126	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTCTCTCTTGAAAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	11528653	11503391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11504527_11528327
ES.32455.2	chr8	-	1145	2	NNC	ENSMUSG00000031504.7	novel	1392	2	NA	NA	14332	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCCTTGTTCTTGGGA	NA	False	NA	NA	False	ATTAAA	-12	NA	11514378	11503522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11504527_11514237
ES.32455.3	chr8	-	1331	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	55	6	55	-6	multi-exon	FALSE	canonical	1	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAAGCCTTGTTCTTGGG	NA	False	NA	NA	False	ATTAAA	-11	NA	11528655	11503523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11504527_11528327
ES.32456.1	chr8	+	180	1	Intergenic	novelGene_26484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGATATCAT	NA	False	NA	NA	False	NA	NA	NA	11531295	11531475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11531300_11531500
ES.32457.1	chr8	+	176	1	Intergenic	novelGene_26485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGTAG	NA	False	NA	NA	False	NA	NA	NA	11538452	11538628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11538500_11538600
ES.32458.1	chr8	+	1259	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	45	3	-16	-3	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547550	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.10	chr8	+	1135	9	FSM	ENSMUSG00000031505.12	ENSMUST00000178817.8	2830	9	18	1677	1	-4	multi-exon	FALSE	canonical	3	6	junction_3	84.6699474429977	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547584	11563283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.11	chr8	+	1213	8	NIC	ENSMUSG00000031505.12	novel	2830	9	NA	NA	0	-4	intron_retention	FALSE	canonical	3	6	junction_3	90.5123737171795	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547586	11563283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.12	chr8	+	1603	4	ISM	ENSMUSG00000031505.12	ENSMUST00000180269.2	749	7	-44	3552	2	-386	5prime_fragment	FALSE	canonical	3	77	junction_1	90.5096679918781	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCATTTTTCTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	11547588	11556684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430
ES.32458.14	chr8	+	3918	8	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	77	junction_1	71.1815729422342	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547591	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.15	chr8	+	1332	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	24	3	-1	-3	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547591	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.17	chr8	+	4495	6	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	35	4	10	-4	intron_retention	FALSE	canonical	3	77	junction_1	81.4729402930814	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547602	11563283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321
ES.32458.18	chr8	+	2070	8	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	77	junction_1	70.5725852999475	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547602	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11560348_11561876_11561998_11562894
ES.32458.19	chr8	+	1191	9	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	101.699004419906	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGAGTTTGTGGTTGT	NA	False	NA	31	True	AATAAA	-45	NA	11547612	11563285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11562894
ES.32458.2	chr8	+	6936	5	FSM	ENSMUSG00000031505.12	ENSMUST00000178364.8	684	5	-38	-6214	-12	-3	multi-exon	FALSE	canonical	3	162	junction_1	55.3940430010304	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547554	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706
ES.32458.20	chr8	+	1390	9	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	20	-4	intron_retention	FALSE	canonical	3	77	junction_1	66.9261486640312	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547612	11563283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.21	chr8	+	5852	7	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	20	0	intron_retention	FALSE	canonical	3	77	junction_1	75.1176854453508	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547612	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226
ES.32458.22	chr8	+	1268	8	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	-18	-3	intron_retention	FALSE	canonical	1	1	junction_7	108.691474986283	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547614	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11562894
ES.32458.23	chr8	+	4567	7	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	77	junction_1	75.9868409660515	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547614	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11560348_11561876_11561998_11562894
ES.32458.24	chr8	+	7418	6	NIC	ENSMUSG00000031505.12	novel	1359	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	77	junction_1	75.0210637088011	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547627	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11559373_11559452_11559558_11560226
ES.32458.25	chr8	+	2676	7	NIC	ENSMUSG00000031505.12	novel	1108	9	NA	NA	3458	0	intron_retention	FALSE	canonical	1	1	junction_6	103.216600731988	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11551090	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226_11560348_11562894
ES.32458.26	chr8	+	2199	5	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	10340	6	-2054	-6	3prime_fragment	FALSE	canonical	3	211	junction_1	25.3118055460293	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATTTGGAGTTTGTGG	1015	False	NA	27	True	AATAAA	-41	NA	11557907	11563281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.27	chr8	+	2537	1	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	-1656	606	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACAGTCATTGGGTCTT	1413	False	NA	NA	False	AATAAA	-10	NA	11558305	11560842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11558300_11560800
ES.32458.28	chr8	+	2368	2	Genic_Genomic	ENSMUSG00000031505.12	novel	1307	10	NA	NA	-100	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	1402	False	NA	30	True	AATAAA	-44	NA	11559861	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_11559916_11560970
ES.32458.29	chr8	+	1431	2	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	13389	3	995	-3	3prime_fragment	FALSE	canonical	3	252	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	2497	False	NA	30	True	AATAAA	-44	NA	11560956	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11561998_11562894
ES.32458.3	chr8	+	4512	7	NNC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_4	99.0747473151234	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547567	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555535_11556706_11560348_11561876_11561998_11562894
ES.32458.4	chr8	+	4493	7	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	162	junction_1	45.852723171282	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547574	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11560348_11561876_11561998_11562894
ES.32458.5	chr8	+	1307	9	NNC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	7	-6	intron_retention	FALSE	canonical	0	0	junction_4	88.7989301737358	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCTTGCTCTGAGAC	NA	False	NA	7	True	AATAAA	-21	NA	11547574	11563261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555535_11556706_11556816_11559321_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.6	chr8	+	1114	9	FSM	ENSMUSG00000031505.12	ENSMUST00000178721.2	1108	9	-9	3	7	-3	multi-exon	FALSE	canonical	1	1	junction_8	91.7509366437204	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGAGTTTGTGGTTG	NA	False	NA	30	True	AATAAA	-44	NA	11547574	11563284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11562894
ES.32458.7	chr8	+	4402	6	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	6	junction_3	101.572831013022	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547576	11563287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11556706_11560348_11561876_11561998_11562894
ES.32458.8	chr8	+	1197	10	NNC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	83.7337048824028	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGAGTTTGTGGTT	NA	False	NA	29	True	AATAAA	-43	NA	11547581	11563283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11547627_11552651_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ES.32458.9	chr8	+	1293	7	NIC	ENSMUSG00000031505.12	novel	1108	9	NA	NA	1	610	intron_retention	FALSE	canonical	3	162	junction_1	47.2490446699425	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCATTGGGTCTTTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	11547584	11560846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559558_11560226
ES.32459.1	chr8	+	175	1	Intergenic	novelGene_26486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAAGATAACCC	NA	False	NA	NA	False	NA	NA	NA	11575480	11575655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11575500_11575700
ES.3246.1	chr10	-	2835	7	NNC	ENSMUSG00000052151.13	novel	659	4	NA	NA	34	48246	intron_retention	FALSE	canonical	0	0	junction_1	26.9284030140833	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGTTGTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	79369557	79314017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79315982_79317371_79317481_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ES.3246.2	chr10	-	1631	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	19	4	-5	1	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCATGCATGTTGATTTT	NA	False	NA	-4	True	TATAAA	-18	NA	79369611	79362267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ES.3246.3	chr10	-	1710	7	NNC	ENSMUSG00000052151.13	novel	1654	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.282306993753	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	-5	True	TATAAA	-17	NA	79369627	79362268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79367113_79367178_79369457
ES.3246.4	chr10	-	1654	6	NNC	ENSMUSG00000052151.13	novel	1654	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.2404620418011	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	-5	True	TATAAA	-17	NA	79369610	79362268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366632_79366710_79366863_79369457
ES.3246.5	chr10	-	3680	6	NNC	ENSMUSG00000052151.13	novel	1654	6	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	24.2602555633695	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCATGCATGTTG	NA	False	NA	-9	True	TATAAA	-13	NA	79369599	79362272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79367391
ES.3246.6	chr10	-	1449	5	NIC	ENSMUSG00000052151.13	novel	1654	6	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	25.791229129299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTCTGCCATGCATG	NA	False	NA	-12	True	TATAAA	-10	NA	79369589	79362275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79369457
ES.3246.7	chr10	-	988	6	FSM	ENSMUSG00000052151.13	ENSMUST00000163602.9	1609	6	27	594	-5	3	multi-exon	FALSE	canonical	3	7	junction_5	21.5462293684997	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGAGTCCTGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	79369599	79362857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369498
ES.32460.1	chr8	+	1939	2	Antisense	novelGene_ENSMUSG00000056228.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	11587985	11590580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_11588457_11589112
ES.32461.1	chr8	+	154	1	Intergenic	novelGene_26487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	11594307	11594461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11594300_11594500
ES.32462.1	chr8	+	175	1	Antisense	novelGene_ENSMUSG00000056228.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATACCCAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	11599365	11599540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_11599400_11599500
ES.32463.1	chr8	-	6528	4	NIC	ENSMUSG00000056228.11	novel	2212	6	NA	NA	1959	5560	intron_retention	FALSE	canonical	3	187	junction_2	17.7200451466693	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	11568427	11558416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11564700_11566150_11566250_11567818_11567943_11568405
ES.32463.10	chr8	-	2003	16	NNC	ENSMUSG00000056228.11	novel	2007	15	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	68.8333252623078	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAAAGTGGGCCTATG	NA	False	NA	-60	True	ATTAAA	-25	NA	11600730	11564020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11572007_11572209_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.11	chr8	-	2435	17	NNC	ENSMUSG00000056228.11	novel	2007	15	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	99.8846209383607	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTTTAGCCAATAGTAAA	NA	False	NA	-71	True	ATTAAA	-14	NA	11600731	11564031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11572007_11572209_11576001_11576070_11579579_11579886_11580294_11580619_11587271_11587356_11591897_11592004_11592518_11592591_11592901_11592978_11597726_11597845_11600257_11600309_11600498
ES.32463.12	chr8	-	1793	15	NNC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	59.3361231477427	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGTTTAGCCAATAGTA	NA	False	NA	-73	True	ATTAAA	-12	NA	11600743	11564033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592582_11597726_11597845_11600257_11600309_11600498
ES.32463.13	chr8	-	1324	10	FSM	ENSMUSG00000056228.11	ENSMUST00000211406.2	1352	10	64	-36	-7	1	multi-exon	FALSE	canonical	2	30	junction_1	59.6396586919215	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGACATGGGATGCAG	NA	False	NA	NA	False	NA	NA	NA	11600702	11571851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11572209_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.14	chr8	-	1354	10	NIC	ENSMUSG00000056228.11	novel	1375	10	NA	NA	22	1	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	75.0718174668615	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGACATGGGATGCAG	NA	False	NA	NA	False	NA	NA	NA	11600719	11571851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11572219_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.16	chr8	-	1397	11	NNC	ENSMUSG00000056228.11	novel	1375	10	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	88.2308902822589	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11600730	11571885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11572219_11576001_11576070_11579579_11579714_11579816_11579886_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.17	chr8	-	793	4	FSM	ENSMUSG00000056228.11	ENSMUST00000210845.2	826	4	35	-2	-14	2	multi-exon	FALSE	canonical	3	13	junction_1	105.379736614251	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGCCTGTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	11600709	11596674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11597088_11597726_11597845_11600257_11600309_11600498
ES.32463.2	chr8	-	4950	2	Antisense	novelGene_ENSMUSG00000031505.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	11563787	11558417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_11560603_11561022
ES.32463.4	chr8	-	1817	15	NNC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	12	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.3156980976902	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGCCACATTTGCAACA	NA	False	NA	11	True	NA	NA	NA	11600680	11563949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576064_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.6	chr8	-	1885	15	NIC	ENSMUSG00000056228.11	novel	1902	15	NA	NA	5	8	combination_of_known_junctions	FALSE	canonical	3	153	junction_9	26.6340468006571	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAACTGTGTACCACT	NA	False	NA	-8	True	AGTAAA	-44	NA	11600761	11563968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32463.9	chr8	-	1753	15	NNC	ENSMUSG00000056228.11	novel	2007	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	59.3180634635119	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAAAGTGGGCCTATG	NA	False	NA	-60	True	ATTAAA	-25	NA	11600698	11564020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587339_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ES.32464.1	chr8	+	1905	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210740.2	1866	2	-36	-3	-36	2	multi-exon	FALSE	canonical	2	8	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTATTTCCTTATGTG	NA	False	NA	18	True	NA	NA	NA	11606026	11613253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11606096_11611417
ES.32464.10	chr8	+	1856	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210041.2	1881	2	26	-1	26	0	multi-exon	FALSE	canonical	0	0	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11608221	11613250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11608245_11611417
ES.32464.11	chr8	+	2006	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	-17	-18	-17	17	multi-exon	FALSE	canonical	3	111	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCTGCCTGTGGCTGCT	NA	False	NA	33	True	NA	NA	NA	11608411	11613268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11608567_11611417
ES.32464.12	chr8	+	2835	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	-8	-856	-8	855	multi-exon	FALSE	canonical	3	111	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATATGTGTATGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	11608420	11614106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11608567_11611417
ES.32464.2	chr8	+	2833	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	-2	-17	1	17	multi-exon	FALSE	canonical	3	454	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCTGCCTGTGGCTGCT	NA	False	NA	33	True	NA	NA	NA	11606063	11613268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11607046_11611417
ES.32464.3	chr8	+	1908	3	NIC	ENSMUSG00000045969.9	novel	382	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	227	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11606063	11613250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11606096_11607002_11607046_11611417
ES.32464.4	chr8	+	1971	2	NNC	ENSMUSG00000045969.9	novel	1866	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11606066	11613250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11606205_11611417
ES.32464.5	chr8	+	1671	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	369	774	324	429	multi-exon	FALSE	canonical	3	454	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGTTGCTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	11606434	11612477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11607046_11611417
ES.32464.6	chr8	+	1534	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	381	899	336	304	multi-exon	FALSE	canonical	3	454	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGTGTCAGACTGATTT	NA	False	NA	NA	False	AATACA	-20	NA	11606446	11612352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11607046_11611417
ES.32464.7	chr8	+	3290	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	381	-857	336	857	multi-exon	FALSE	canonical	3	454	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTGTATGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	11606446	11614108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11607046_11611417
ES.32464.8	chr8	+	2066	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	394	354	349	-352	multi-exon	FALSE	canonical	3	454	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTTAGCATTTAATT	NA	False	NA	5	True	AATAAA	-17	NA	11606459	11612897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11607046_11611417
ES.32464.9	chr8	+	5993	1	NIC	ENSMUSG00000045969.9	novel	2241	2	NA	NA	374	429	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGTTGCTGAAGTA	NA	False	NA	NA	False	NA	NA	NA	11606484	11612477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11606500_11612500
ES.32465.1	chr8	+	1177	1	Intergenic	novelGene_26488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTAGTTCACA	NA	False	NA	NA	False	NA	NA	NA	11681187	11682364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11681200_11682400
ES.32466.1	chr8	-	10472	6	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	3	12	intron_retention	FALSE	canonical	3	159	junction_3	130.06613702267	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTTTGTAGGTGGGG	NA	False	NA	10	True	AATAAA	-27	NA	11685751	11661570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11678531_11682865_11683019_11685410
ES.32466.10	chr8	-	2300	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	-13	-2	-10	1	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCTGAAACTGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	11685767	11661581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ES.32466.13	chr8	-	16989	2	ISM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	4035	0	2228	0	intron_retention	FALSE	canonical	3	548	junction_1	0	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11681722	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061
ES.32466.14	chr8	-	2023	5	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	187.77563074052	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685727	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11678438_11678531_11682865_11683019_11685410
ES.32466.15	chr8	-	2445	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	3	-1	3	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685751	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
ES.32466.16	chr8	-	2120	6	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	120	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	199.048335838308	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11683830	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11683652
ES.32466.18	chr8	-	5163	6	FSM	ENSMUSG00000031508.15	ENSMUST00000211445.2	1767	6	-16	-3380	-16	0	multi-exon	FALSE	canonical	3	43	junction_5	197.58299521973	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685052	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
ES.32466.19	chr8	-	2866	3	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	4147	0	intron_retention	FALSE	canonical	1	16	junction_1	266	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	8262	False	NA	-2	True	AATAAA	-15	NA	11670479	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662935_11665814_11665911_11669061
ES.32466.2	chr8	-	4705	3	NIC	ENSMUSG00000031508.15	novel	1767	6	NA	NA	-2	2	intron_retention	FALSE	canonical	1	3	junction_1	20	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	NA	False	NA	0	True	AATAAA	-17	NA	11685032	11661580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11682865_11683019_11684810
ES.32466.20	chr8	-	3620	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	203.662847754704	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685218	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11683652
ES.32466.21	chr8	-	4456	2	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	5721	-2	5721	0	3prime_fragment	FALSE	canonical	3	454	junction_1	0	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	9836	False	NA	-2	True	AATAAA	-15	NA	11668905	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11662948_11665814
ES.32466.22	chr8	-	5276	6	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	111	junction_3	168.321834590762	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685765	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
ES.32466.23	chr8	-	5214	6	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	7	junction_5	205.856649151782	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685041	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684748
ES.32466.24	chr8	-	7840	4	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-1713	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	230.194603662978	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	2402	False	NA	-2	True	AATAAA	-15	NA	11676339	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665749_11665911_11669061_11669298_11670261
ES.32466.25	chr8	-	2334	6	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.611363302881	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685737	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665749_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ES.32466.26	chr8	-	2325	7	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	221.288650108104	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685737	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665814_11665911_11669061_11669298_11674162_11674219_11678438_11678531_11682865_11683019_11685410
ES.32466.27	chr8	-	4494	5	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	1472	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	220.635870836997	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	5587	False	NA	-2	True	AATAAA	-15	NA	11673154	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670361_11670456
ES.32466.28	chr8	-	5195	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_3	219.865049519017	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685034	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11684810
ES.32466.29	chr8	-	8589	3	ISM	ENSMUSG00000031508.15	ENSMUST00000211445.2	1767	6	10750	-3380	340	0	3prime_fragment	FALSE	canonical	3	159	junction_2	194.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	4455	False	NA	-2	True	AATAAA	-15	NA	11674286	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061_11669298_11670261
ES.32466.3	chr8	-	7030	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	0	2	intron_retention	FALSE	canonical	3	89	junction_3	156.362399572276	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	NA	False	NA	0	True	AATAAA	-17	NA	11685754	11661580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
ES.32466.31	chr8	-	7008	1	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	6036	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11668590	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11661600_11668600
ES.32466.32	chr8	-	3781	6	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	201.994455369448	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685688	11661582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11671336_11682286_11683019_11685410
ES.32466.33	chr8	-	3306	3	NNC	ENSMUSG00000031508.15	novel	2285	6	NA	NA	3784	0	intron_retention	FALSE	non_canonical	0	0	junction_1	274	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	7899	False	NA	-3	True	AATAAA	-14	NA	11670842	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665749_11665911_11669061
ES.32466.34	chr8	-	6979	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	-70	0	intron_retention	FALSE	canonical	3	43	junction_5	207.145359590796	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685106	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11684810
ES.32466.35	chr8	-	5149	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	6	1	3	0	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685751	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ES.32466.36	chr8	-	2372	7	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	194.263280684287	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685129	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11684810
ES.32466.38	chr8	-	7702	8	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	211.125555061437	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685750	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11670769_11671000_11673359_11678531_11682865_11683019_11685410
ES.32466.39	chr8	-	4362	4	NNC	ENSMUSG00000031508.15	novel	2285	6	NA	NA	1702	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	230.194603662978	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	5817	False	NA	-3	True	AATAAA	-14	NA	11672924	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665811_11665911_11669061_11669298_11670261
ES.32466.4	chr8	-	6240	3	NNC	ENSMUSG00000031508.15	novel	2625	4	NA	NA	791	2	intron_retention	FALSE	non_canonical	0	0	junction_1	274	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	4906	False	NA	0	True	AATAAA	-17	NA	11673835	11661580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665811_11665911_11669061
ES.32466.40	chr8	-	5270	6	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	44	0	intron_retention	FALSE	canonical	3	27	junction_3	204.957166256757	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685710	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
ES.32466.41	chr8	-	3334	4	NNC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	-724	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	240.117101061591	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	3391	False	NA	-3	True	AATAAA	-14	NA	11675350	11661583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662932_11665814_11665911_11669061_11669298_11673696
ES.32466.43	chr8	-	4859	4	NIC	ENSMUSG00000031508.15	novel	5156	5	NA	NA	56	0	intron_retention	FALSE	canonical	0	0	junction_1	198.5318334396	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCTGTCTCTGAAACTG	NA	False	NA	-4	True	AATAAA	-13	NA	11685698	11661584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11678438_11678531_11682865_11683019_11685410
ES.32466.44	chr8	-	3778	2	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	3859	2254	3859	1124	internal_fragment	FALSE	canonical	3	548	junction_1	0	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGGGAAAGTTGATTAG	7974	False	NA	NA	False	AATAAA	-17	NA	11670767	11663838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061
ES.32466.45	chr8	-	2836	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	59	2261	56	1119	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTGGGGGAAAGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	11685698	11663843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ES.32466.46	chr8	-	6324	2	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	1020	2547	1020	831	internal_fragment	FALSE	canonical	3	548	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGATGTACTTCACT	5135	False	NA	NA	False	NA	NA	NA	11673606	11664131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061
ES.32466.47	chr8	-	2595	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	11	2550	8	830	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGATGTACTTCAC	NA	False	NA	NA	False	NA	NA	NA	11685746	11664132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ES.32466.48	chr8	-	7324	5	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	3	812	intron_retention	FALSE	canonical	3	89	junction_2	170.635576595269	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	11685751	11664150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
ES.32466.49	chr8	-	2976	2	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	3694	3221	3694	157	internal_fragment	FALSE	canonical	3	548	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAAAAGCCAGAGCCTC	7809	False	NA	NA	False	NA	NA	NA	11670932	11664805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061
ES.32466.5	chr8	-	11413	5	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	16	2	intron_retention	FALSE	canonical	3	398	junction_4	54.7374414820423	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTCTGAAACTGCTTT	NA	False	NA	0	True	AATAAA	-17	NA	11685738	11661580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11678531_11682865_11683019_11685410
ES.32466.50	chr8	-	6507	5	NIC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	17	9	intron_retention	FALSE	canonical	3	89	junction_2	170.635576595269	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGCTCTGTCATAGGT	NA	False	NA	NA	False	NA	NA	NA	11685737	11664953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665911_11669061_11669298_11673696_11678531_11682865_11683019_11685410
ES.32466.51	chr8	-	5142	2	ISM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	1379	3370	1379	8	internal_fragment	FALSE	canonical	3	548	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGCTCTGTCATAGG	5494	False	NA	NA	False	NA	NA	NA	11673247	11664954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11665911_11669061
ES.32466.52	chr8	-	1254	1	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	8412	2	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAGAACTTGCTCTGT	NA	False	NA	NA	False	AATAAA	-41	NA	11666214	11664960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11665000_11666200
ES.32466.53	chr8	-	6616	3	FSM	ENSMUSG00000031508.15	ENSMUST00000211389.2	1359	3	58	-5315	58	-3095	multi-exon	FALSE	canonical	3	398	junction_2	21.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAACCTGTTTTGAGGGG	NA	False	NA	NA	False	NA	NA	NA	11685696	11672353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11678531_11682865_11683019_11685410
ES.32466.54	chr8	-	6653	3	ISM	ENSMUSG00000031508.15	ENSMUST00000211445.2	1767	6	-118	7412	-118	-3116	5prime_fragment	FALSE	canonical	3	43	junction_2	199	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11685154	11672374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11678531_11682865_11683019_11684810
ES.32466.55	chr8	-	3053	4	NNC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	17	-3236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	198.062279767417	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGAATTTTAAGGCCC	NA	False	NA	NA	False	AATAAA	-14	NA	11685737	11672494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11674976_11678438_11678531_11682865_11683019_11685410
ES.32466.56	chr8	-	6530	3	FSM	ENSMUSG00000031508.15	ENSMUST00000211389.2	1359	3	3	-5174	3	-3236	multi-exon	FALSE	canonical	3	398	junction_2	21.5	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGAATTTTAAGGCCC	NA	False	NA	NA	False	AATAAA	-14	NA	11685751	11672494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11678531_11682865_11683019_11685410
ES.32466.57	chr8	-	3934	4	NNC	ENSMUSG00000031508.15	novel	2447	7	NA	NA	17	-4133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.5318334396	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGCTTCTCTCTTCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	11685737	11673391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11676754_11678438_11678531_11682865_11683019_11685410
ES.32466.58	chr8	-	2430	1	NIC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	-3912	1560	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGACTCTGCTTTTTATAT	203	False	NA	NA	False	TTTAAA	-21	NA	11678538	11676108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11676100_11678500
ES.32466.6	chr8	-	2206	6	NIC	ENSMUSG00000031508.15	novel	2285	6	NA	NA	-37	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	185.378531658874	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCTGAAACTGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	11685073	11661581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11684810
ES.32466.7	chr8	-	8635	7	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_4	190.577776482172	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCTGAAACTGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	11685751	11661581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11672199_11678531_11682865_11683019_11685410
ES.32466.8	chr8	-	2404	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	-5	-1	-2	1	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCTGAAACTGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	11685759	11661581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
ES.32466.9	chr8	-	7176	6	NNC	ENSMUSG00000031508.15	novel	2398	7	NA	NA	16	1	intron_retention	FALSE	canonical	0	0	junction_3	200.223275370273	614	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCTGAAACTGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	11685738	11661581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11665911_11669061_11669298_11670261_11672300_11678438_11678531_11682865_11683019_11685410
ES.32467.1	chr8	+	2641	1	Intergenic	novelGene_26489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11689516	11692157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_11689500_11692200
ES.32468.1	chr8	-	172	1	ISM	ENSMUSG00000031509.11	ENSMUST00000033906.11	1263	6	23655	0	5640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	11705095	11704923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_11704900_11705100
ES.32469.2	chr8	-	760	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3519	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.4278151113294	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATCTGATAGGGCTGT	NA	False	NA	-10	True	AATAAA	-20	NA	11716123	11705479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712585_11712692_11715035_11715099_11715899
ES.3247.1	chr10	+	4534	1	Intergenic	novelGene_2540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGCTGGGAATATGG	NA	False	NA	NA	False	NA	NA	NA	79370731	79375265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79370700_79375300
ES.32470.1	chr8	-	208	1	Intergenic	novelGene_26490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTAGCACTCAGGAGGC	4820	False	NA	NA	False	NA	NA	NA	11753436	11753228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_11753200_11753400
ES.32471.1	chr8	+	4602	22	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.2924422031656	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11777837	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11777884_11778234_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.10	chr8	+	4807	19	FSM	ENSMUSG00000031511.17	ENSMUST00000110909.9	4926	19	121	-2	49	2	multi-exon	FALSE	canonical	2	2	junction_18	27.7398073818159	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTTTTAATATTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	11778225	11877151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11874504
ES.32471.11	chr8	+	4466	21	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5097851968069	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9372	False	NA	17	True	ATTAAA	-27	NA	11808097	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808190_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.13	chr8	+	4244	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	24.1689654079129	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9610	False	NA	17	True	ATTAAA	-27	NA	11808335	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.14	chr8	+	4469	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-18	0	-18	0	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9610	False	NA	17	True	ATTAAA	-27	NA	11808335	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.16	chr8	+	4634	22	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.6385864413477	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9611	False	NA	17	True	ATTAAA	-27	NA	11808336	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11808988_11809066_11831154_11831240_11832524_11832656_11835712_11835915_11836171_11836261_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.17	chr8	+	3191	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-17	1277	-17	-1277	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGAGAGCCCTCAAGTGC	9611	False	NA	NA	False	AATAAA	-28	NA	11808336	11883942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.18	chr8	+	2622	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	-16	1845	-16	1074	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGATCTGAGCACCTA	9612	False	NA	NA	False	TATAAA	-27	NA	11808337	11883374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.19	chr8	+	2822	21	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-5	1061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.4752147117834	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCTTGTAAATACTGGG	9623	False	NA	NA	False	TATAAA	-14	NA	11808348	11883361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11835991_11836261_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865256_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.2	chr8	+	4852	20	NIC	ENSMUSG00000031511.17	novel	4038	18	NA	NA	131	0	intron_retention	FALSE	canonical	0	0	junction_1	23.4666026608713	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11777851	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11778417_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.20	chr8	+	4243	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	24.2285924345189	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9634	False	NA	17	True	ATTAAA	-27	NA	11808359	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.21	chr8	+	4395	20	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	23.7262784289623	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9639	False	NA	17	True	ATTAAA	-27	NA	11808364	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865256_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.22	chr8	+	2834	3	FSM	ENSMUSG00000031511.17	ENSMUST00000209686.2	2205	3	49	-678	12	678	multi-exon	FALSE	canonical	3	82	junction_2	12	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	9640	False	NA	NA	False	NA	NA	NA	11808365	11836893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11832656_11835712
ES.32471.23	chr8	+	1589	4	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	12	48286	12	718	5prime_fragment	FALSE	canonical	3	82	junction_3	10.4986771653491	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAAAAAAAAAAGCAAGC	9640	False	NA	NA	False	NA	NA	NA	11808365	11836933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712
ES.32471.24	chr8	+	6798	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	12	0	intron_retention	FALSE	canonical	3	61	junction_7	14.7618962280228	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9640	False	NA	17	True	ATTAAA	-27	NA	11808365	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.26	chr8	+	2797	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	15	1639	15	1280	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTGTGTCTCTGTTCT	9643	False	NA	NA	False	NA	NA	NA	11808368	11883580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.27	chr8	+	4679	18	NNC	ENSMUSG00000031511.17	novel	4926	19	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	30.609042696721	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGGCTTTTAATATT	9643	False	NA	NA	False	AATAAA	-14	NA	11808368	11877148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808522_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11874504
ES.32471.3	chr8	+	3094	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	131	1074	intron_retention	FALSE	canonical	3	22	junction_1	19.8655480669424	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGATCTGAGCACCTA	NA	False	NA	NA	False	TATAAA	-27	NA	11777851	11883374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.30	chr8	+	4425	20	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.9983840637892	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9644	False	NA	17	True	ATTAAA	-27	NA	11808369	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869722_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.31	chr8	+	4459	21	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.5063976113656	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9653	False	NA	17	True	ATTAAA	-27	NA	11808378	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869338_11869372_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.32	chr8	+	4419	20	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.0749061895003	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9654	False	NA	17	True	ATTAAA	-27	NA	11808379	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860256_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.33	chr8	+	4191	3	FSM	ENSMUSG00000031511.17	ENSMUST00000209686.2	2205	3	63	-2049	-11	2049	multi-exon	FALSE	canonical	3	82	junction_2	12	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTGGTTTGATTTACAG	9654	False	NA	NA	False	NA	NA	NA	11808379	11838264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11808518_11831154_11832656_11835712
ES.32471.34	chr8	+	4502	21	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.1862981551275	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACGTGTTGCTTCATC	9664	False	NA	11	True	ATTAAA	-21	NA	11808389	11885213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11836167_11836261_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.35	chr8	+	4323	20	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	-1356	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.4669165162402	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACGTGTTGCTTCATC	8862	False	NA	11	True	ATTAAA	-21	NA	11831170	11885213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11876723_11876782_11881492_11881593_11881894_11881950_11882969
ES.32471.36	chr8	+	4205	18	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	24168	0	-5	0	3prime_fragment	FALSE	canonical	3	61	junction_5	13.8098806210686	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11832521	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.37	chr8	+	5874	16	NNC	ENSMUSG00000031511.17	novel	334	4	NA	NA	3368	0	intron_retention	FALSE	canonical	1	3	junction_1	25.0301151948341	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11836008	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11836261_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.38	chr8	+	3018	2	FSM	ENSMUSG00000031511.17	ENSMUST00000210287.2	898	2	-1978	-142	412	142	multi-exon	FALSE	canonical	3	101	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATGAAGTTTAACATAAT	7292	False	NA	NA	False	NA	NA	NA	11847865	11851101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_11850555_11850772
ES.32471.39	chr8	+	3563	15	NNC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	5365	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.4029356045316	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	875	False	NA	17	True	ATTAAA	-27	NA	11855208	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11876723_11876782_11881492_11881593_11881894_11881950_11882969_11883036_11883111
ES.32471.4	chr8	+	4905	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	165	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	19.8655480669424	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11777885	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.5	chr8	+	4666	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	185	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	27.7491519167481	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	NA	False	NA	17	True	ATTAAA	-27	NA	11777905	11885219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.6	chr8	+	4828	21	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-191	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	26.5779984197456	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTGTTGCTTCATCTT	NA	False	NA	13	True	ATTAAA	-23	NA	11777913	11885215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865256_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32471.7	chr8	+	2672	18	NNC	ENSMUSG00000031511.17	novel	4926	19	NA	NA	-191	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.0641568515488	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGGCTTTTAATATT	NA	False	NA	NA	False	AATAAA	-14	NA	11777913	11877148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11869637_11869732_11871959_11872050_11876723
ES.32471.8	chr8	+	4559	22	NNC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	-27	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	26.0066274476683	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACGTGTTGCTTCATC	NA	False	NA	11	True	ATTAAA	-21	NA	11778149	11885213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969_11883036_11883111
ES.32471.9	chr8	+	3303	21	NIC	ENSMUSG00000031511.17	novel	4628	21	NA	NA	26	-1285	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	19.8655480669424	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCACAGCGAGAGCCC	NA	False	NA	NA	False	AATAAA	-20	NA	11778202	11883934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ES.32472.1	chr8	-	2144	1	Intergenic	novelGene_26491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTCTTCTAAGGGACAG	NA	False	NA	NA	False	NA	NA	NA	11808301	11806157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_11806200_11808300
ES.32473.1	chr8	-	3065	1	Intergenic	novelGene_26492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATACTGTGATGGTAC	NA	False	NA	NA	False	NA	NA	NA	11813619	11810554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_11810600_11813600
ES.32474.1	chr8	-	222	1	Intergenic	novelGene_26493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAATAAATAACAGCTA	NA	False	NA	NA	False	AAAAAG	-15	NA	11842287	11842065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_11842100_11842300
ES.32475.1	chr8	-	2387	1	Antisense	novelGene_ENSMUSG00000031511.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAGTAACACCAAAAAAA	NA	False	NA	NA	False	TTTAAA	-21	NA	11874678	11872291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_11872300_11874700
ES.32476.1	chr8	+	3167	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4788	2623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGAAGCGTGCAGCAAT	6241	False	NA	NA	False	AATAAA	-19	NA	11919370	11946736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11919465_11924137_11924331_11943856
ES.32476.2	chr8	+	2640	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4768	2577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTGATTTATATTT	6261	False	NA	NA	False	AATAAA	-25	NA	11919390	11946690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11919465_11924137_11924331_11944317
ES.32476.3	chr8	+	1949	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4753	18320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTGGTGAAAGCCGTG	6276	False	NA	NA	False	AATAAA	-14	NA	11919405	11962433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11919465_11924137_11924331_11960736
ES.32476.4	chr8	+	1997	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4167	18321	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTGAAAGCCGTGA	6862	False	NA	NA	False	AATAAA	-15	NA	11919991	11962434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11920098_11924137_11924331_11960736
ES.32476.5	chr8	+	2001	4	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4166	1722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.44948974278318	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACTTTTTTTCCTGCCA	6863	False	NA	NA	False	NA	NA	NA	11919992	11945835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11920098_11924137_11924331_11943856_11944042_11944317
ES.32476.6	chr8	+	3170	3	NNC	ENSMUSG00000109772.2	novel	429	2	NA	NA	-4158	2623	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGAAGCGTGCAGCAAT	6871	False	NA	NA	False	AATAAA	-19	NA	11920000	11946736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_11920098_11924137_11924331_11943856
ES.32477.1	chr8	-	161	1	Intergenic	novelGene_26494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGATCATAAACT	NA	False	NA	NA	False	NA	NA	NA	12156592	12156431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_12156400_12156600
ES.32478.1	chr8	+	3910	1	Intergenic	novelGene_26495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTAACCCAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	12159828	12163738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12159800_12163700
ES.32479.1	chr8	+	3580	1	FSM	ENSMUSG00000096014.2	ENSMUST00000180353.2	4832	1	292	960	292	-960	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTAGCAAATATGTTTT	6217	False	NA	NA	False	ATTAAA	-19	NA	12445586	12449166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12445600_12449200
ES.3248.1	chr10	-	2598	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	79	-1	1	1	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCATGGATTCCAG	NA	False	NA	-2	True	ATTAAA	-17	NA	79390954	79376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.10	chr10	-	3376	12	NIC	ENSMUSG00000042570.15	novel	2562	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	15	junction_8	65.1624796975267	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390926	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.11	chr10	-	2641	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_11	85.8223293917278	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390717	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390379
ES.3248.12	chr10	-	2566	14	FSM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	-4	0	-4	0	multi-exon	FALSE	canonical	3	15	junction_10	62.0923153160017	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390929	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.13	chr10	-	3707	11	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_3	70.9978168678446	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390935	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79378316_79378430_79378556_79380353_79380451_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.15	chr10	-	2300	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	14	junction_1	77.0372835421626	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390916	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390744
ES.3248.16	chr10	-	3188	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	111	junction_11	40.2118357643268	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390929	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.17	chr10	-	4961	11	NIC	ENSMUSG00000042570.15	novel	2562	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	15	junction_7	67.1163914405416	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390939	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377769_79378238_79378316_79378430_79380449_79380522_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.18	chr10	-	3055	13	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_8	65.6050366460787	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390949	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384625_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.19	chr10	-	4845	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	111	junction_11	34.9019879137361	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390935	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.2	chr10	-	2708	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-7	1	intron_retention	FALSE	canonical	1	1	junction_13	61.7195412746071	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCATGGATTCCAG	NA	False	NA	-2	True	ATTAAA	-17	NA	79390932	79376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386373_79390907
ES.3248.20	chr10	-	3656	11	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	111	junction_10	35.4451689232821	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390927	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.22	chr10	-	4200	8	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	401	0	intron_retention	FALSE	canonical	3	9	junction_7	73.6641579281628	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79386242	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79378316_79378430_79378556_79380353_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385688_79386149
ES.3248.23	chr10	-	2351	13	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	1	2	junction_1	80.9373471684529	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390929	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79378211_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
ES.3248.24	chr10	-	4282	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_4	64.2660888611933	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390929	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79378642_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.27	chr10	-	3818	11	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	38	junction_10	59.0748677527085	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390717	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.28	chr10	-	3380	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	111	junction_11	35.7373337672718	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390954	79376079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.3	chr10	-	5029	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	1	intron_retention	FALSE	canonical	3	111	junction_12	39.3095796919219	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTCTCATGGATTCCAG	NA	False	NA	-2	True	ATTAAA	-17	NA	79390927	79376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.30	chr10	-	2496	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_2	63.790986360366	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390930	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79377694_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.31	chr10	-	2742	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	9	junction_12	62.3803944318041	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390927	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
ES.3248.33	chr10	-	2175	13	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	2	junction_1	65.8450938862486	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390928	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79378211_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.34	chr10	-	3373	12	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_1	87.8803657120631	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390938	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377353_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383546_79384187_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.35	chr10	-	3254	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	9	junction_11	63.1929914362872	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390969	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
ES.3248.36	chr10	-	2617	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	12	junction_2	61.0739197091447	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390949	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79377769_79378211_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.38	chr10	-	8119	9	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	111	junction_8	44.0305291814668	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390929	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377769_79378238_79378316_79378430_79380449_79380522_79380605_79380878_79383559_79384187_79384744_79385017_79385144_79385370_79386241_79390907
ES.3248.39	chr10	-	3356	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	38	junction_12	52.1999361430005	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGTGTCTCATGGATTC	NA	False	NA	-5	True	ATTAAA	-14	NA	79390717	79376080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.4	chr10	-	4963	10	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	401	0	intron_retention	FALSE	canonical	0	0	junction_9	70.0888325230521	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79386242	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79380449_79380522_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385514_79386153
ES.3248.40	chr10	-	4710	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	111	junction_11	39.2550465250769	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGGTGTCTCATGGATT	NA	False	NA	-6	True	ATTAAA	-13	NA	79390929	79376081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.41	chr10	-	4530	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	15	junction_12	59.7411081249754	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGGTGTCTCATGGATT	NA	False	NA	-6	True	ATTAAA	-13	NA	79390929	79376081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390744
ES.3248.42	chr10	-	4317	10	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	111	junction_9	36.6821516123793	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGGTGTCTCATGGATT	NA	False	NA	-6	True	ATTAAA	-13	NA	79390954	79376081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79385144_79385370_79386241_79390907
ES.3248.44	chr10	-	2941	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	16	-5	intron_retention	FALSE	canonical	3	38	junction_12	54.1204289832715	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	False	NA	-9	True	ATTAAA	-10	NA	79390702	79376084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.45	chr10	-	2146	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	14	junction_1	63.0349880798134	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	False	NA	-9	True	ATTAAA	-10	NA	79390930	79376084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.46	chr10	-	3373	12	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	15	junction_11	63.0371791121178	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	False	NA	-9	True	ATTAAA	-10	NA	79390916	79376084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390744
ES.3248.48	chr10	-	2451	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	11	-5	intron_retention	FALSE	canonical	3	14	junction_1	73.0519221741176	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	False	NA	-9	True	ATTAAA	-10	NA	79390707	79376084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.5	chr10	-	4714	11	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_7	70.74666069858	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390927	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.3248.50	chr10	-	3043	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	12	-7	intron_retention	FALSE	canonical	3	9	junction_12	71.2320152740325	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCCGGGGTGTCTCAT	NA	False	NA	-11	True	ATTAAA	-8	NA	79390706	79376086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390379
ES.3248.51	chr10	-	5938	11	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	9	junction_9	66.9985820745484	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCCGGGGTGTCTCAT	NA	False	NA	-11	True	ATTAAA	-8	NA	79390927	79376086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
ES.3248.52	chr10	-	3108	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	71	-7	intron_retention	FALSE	canonical	3	15	junction_12	58.1584879636861	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCCGGGGTGTCTCAT	NA	False	NA	-11	True	ATTAAA	-8	NA	79390840	79376086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390744
ES.3248.6	chr10	-	2894	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	38	junction_13	53.1463314291654	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390723	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.7	chr10	-	3640	12	NIC	ENSMUSG00000042570.15	novel	2562	14	NA	NA	27	0	intron_retention	FALSE	canonical	3	15	junction_8	75.7991037693151	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390691	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ES.3248.8	chr10	-	3069	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	111	junction_12	34.2502027569019	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390956	79376078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ES.32480.1	chr8	+	180	1	Intergenic	novelGene_26496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	12469562	12469742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12469600_12469700
ES.32481.1	chr8	-	4598	1	Intergenic	novelGene_26497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATATAGGTACCAGTGAA	NA	False	NA	NA	False	GATAAA	-17	NA	12529125	12524527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_12524500_12529100
ES.32481.2	chr8	-	2376	2	Intergenic	novelGene_26498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAATAT	NA	False	NA	NA	False	GATAAA	-4	NA	12535452	12524540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_12526753_12535288
ES.32482.1	chr8	+	1161	2	NNC	ENSMUSG00000109582.2	novel	1087	2	NA	NA	-280	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTCTGTCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	12552618	12555340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12552790_12554350
ES.32482.2	chr8	+	1292	2	FSM	ENSMUSG00000109582.2	ENSMUST00000211062.2	1087	2	-206	1	-206	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTCTGTCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	12552692	12555340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12552995_12554350
ES.32482.3	chr8	+	1167	2	NNC	ENSMUSG00000109582.2	novel	1087	2	NA	NA	731	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTCTGTCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	12553629	12555340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12553807_12554350
ES.32483.1	chr8	+	180	1	Intergenic	novelGene_26499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAATACACA	NA	False	NA	NA	False	NA	NA	NA	12565698	12565878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12565700_12565900
ES.32484.1	chr8	+	2293	1	Intergenic	novelGene_26500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTGCAGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	12586909	12589202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12586900_12589200
ES.32485.1	chr8	-	4186	1	Intergenic	novelGene_26501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTTTCATTAGATATT	NA	False	NA	NA	False	AATAAA	-13	NA	12595368	12591182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_12591200_12595400
ES.32486.1	chr8	+	3533	2	ISM	ENSMUSG00000010435.8	ENSMUST00000010579.8	762	7	22633	-2	22633	2	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCTGAGTTGAGTCATT	NA	False	NA	NA	False	AAAAAG	-19	NA	12645681	12650741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12649043_12650569
ES.32487.1	chr8	+	174	1	Intergenic	novelGene_26502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAAGCAAGCAGGGAC	5144	False	NA	NA	False	NA	NA	NA	12652337	12652511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12652300_12652500
ES.32488.1	chr8	-	3681	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	116	0	-9	0	multi-exon	FALSE	canonical	3	142	junction_11	12.9206544206397	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722132	12664276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.11	chr8	-	4570	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	142	junction_11	13.0866344030847	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722121	12664278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.12	chr8	-	4902	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	142	junction_11	13.0039414438389	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722122	12664278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.13	chr8	-	3895	23	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	48.2476394318292	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722116	12664278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12688754_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.14	chr8	-	3646	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	38.0283341077589	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722116	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699705_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.15	chr8	-	3372	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	39.4199634450051	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722116	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12711299_12711368_12713931_12714040_12721954
ES.32488.16	chr8	-	6104	1	NIC	ENSMUSG00000000759.15	novel	3515	21	NA	NA	17572	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	1757	False	NA	-2	True	ATTAAA	-15	NA	12670383	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12664300_12670400
ES.32488.17	chr8	-	3553	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	38.3234914902074	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722139	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.18	chr8	-	3290	19	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.9280603085098	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722106	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.19	chr8	-	4710	21	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	49.1001782074159	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722113	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.2	chr8	-	3532	21	FSM	ENSMUSG00000000759.15	ENSMUST00000164774.8	3515	21	-17	0	7	0	multi-exon	TRUE	canonical	3	10	junction_12	36.8876673157846	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722116	12664276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.20	chr8	-	6626	19	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	142	junction_10	13.3041346956501	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722124	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.21	chr8	-	3724	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	37.2270718064616	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722117	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699628_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.23	chr8	-	3460	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	39.6887474720515	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722116	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.25	chr8	-	4664	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	142	junction_10	12.6764553711053	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722141	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.27	chr8	-	6085	20	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	11	junction_8	37.512398688989	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	12722122	12664279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.28	chr8	-	4826	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	49.3631551709914	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTTTCATGTGGTTTC	NA	False	NA	-3	True	ATTAAA	-14	NA	12722113	12664280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699705_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.3	chr8	-	5394	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	142	junction_10	13.1623516135985	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722122	12664276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.30	chr8	-	3575	20	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_3	51.3935982303066	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722140	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671889_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.32	chr8	-	6726	20	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	6	-3	intron_retention	FALSE	canonical	2	4	junction_16	52.1790546063474	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722117	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12708479_12708589_12711299_12711368_12713931_12714040_12721954
ES.32488.33	chr8	-	3536	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	56	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	37.9029073487448	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722043	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671889_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.35	chr8	-	3523	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	38.6865286630889	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722105	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.36	chr8	-	3542	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	38.5332324104791	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722106	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12721954
ES.32488.37	chr8	-	6376	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	142	junction_9	12.216650007106	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722124	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.38	chr8	-	5391	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	46	-3	intron_retention	FALSE	canonical	3	12	junction_15	36.7875535979629	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTTTCATGTGGTTT	NA	False	NA	-4	True	ATTAAA	-13	NA	12722053	12664281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705975_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.39	chr8	-	3194	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	132	471	7	419	multi-exon	FALSE	canonical	3	142	junction_11	12.9206544206397	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACAGGCTGTTTTACTC	NA	False	NA	NA	False	ACTAAA	-21	NA	12722116	12664747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.4	chr8	-	4633	20	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	39.1647560485635	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCATGTGGTTTCTGA	NA	False	NA	0	True	ATTAAA	-17	NA	12722116	12664277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700215_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.41	chr8	-	3224	21	NNC	ENSMUSG00000000759.15	novel	5724	16	NA	NA	7	2963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.6844607045258	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGACGGCTGGTTCCAGC	NA	False	NA	NA	False	AAAAAG	-12	NA	12722116	12668835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12669532_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.42	chr8	-	6859	5	NNC	ENSMUSG00000000759.15	novel	2977	15	NA	NA	-1582	1980	intron_retention	FALSE	canonical	3	11	junction_4	70.6363928863868	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAACTCTTTGTATTGG	NA	False	NA	NA	False	NA	NA	NA	12689564	12669818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525
ES.32488.44	chr8	-	5735	18	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	1974	intron_retention	FALSE	canonical	3	142	junction_9	13.5860706195313	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACAGAACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	12722116	12669824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.45	chr8	-	5692	20	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	1	1974	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	37.2224725854417	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACAGAACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	12722122	12669824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.46	chr8	-	4500	20	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	134	5548	9	1974	5prime_fragment	FALSE	canonical	3	142	junction_9	13.3806409131453	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACAGAACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	12722114	12669824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.47	chr8	-	3712	18	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	49	-1569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	62.3904992323644	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCTGAGTCTGTATA	NA	False	NA	NA	False	GATAAA	-11	NA	12722050	12681978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12710661_12710831_12711299_12711368_12713931_12714040_12721954
ES.32488.48	chr8	-	2103	14	ISM	ENSMUSG00000000759.15	ENSMUST00000167547.8	5724	16	15	8830	-9	-8830	5prime_fragment	FALSE	canonical	3	142	junction_3	13.7281294596729	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTTGGTCCATGTGCT	NA	False	NA	NA	False	GATAAA	-16	NA	12722108	12689239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.5	chr8	-	6289	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	7	-1	intron_retention	FALSE	canonical	3	142	junction_10	13.3570195889341	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCATGTGGTTTCTGA	NA	False	NA	0	True	ATTAAA	-17	NA	12722116	12664277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.6	chr8	-	3774	23	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_19	48.7379779624449	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCATGTGGTTTCTGA	NA	False	NA	0	True	ATTAAA	-17	NA	12722117	12664277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12708479_12708589_12711299_12711368_12713931_12714040_12721954
ES.32488.7	chr8	-	4855	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	35.7078089365284	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCATGTGGTTTCTGA	NA	False	NA	0	True	ATTAAA	-17	NA	12722123	12664277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.8	chr8	-	3317	19	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	39.8001566471264	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722127	12664278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ES.32488.9	chr8	-	3779	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	51	0	intron_retention	FALSE	canonical	2	4	junction_18	49.2988020350005	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722048	12664278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12708479_12708589_12711299_12711368_12713931_12714040_12721954
ES.32489.1	chr8	+	182	1	Intergenic	novelGene_26503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	12725274	12725456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12725300_12725500
ES.3249.1	chr10	+	3712	1	Intergenic	novelGene_2541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCTGCTGCCAAGATT	NA	False	NA	NA	False	NA	NA	NA	79391513	79395225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79391500_79395200
ES.32490.1	chr8	+	3813	26	ISM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-159	11441	-159	17	5prime_fragment	FALSE	canonical	3	50	junction_9	10.4079969254415	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCTGTTTTATTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	12806854	12907287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933
ES.32490.10	chr8	+	4597	24	NIC	ENSMUSG00000031441.16	novel	4028	28	NA	NA	6	17	intron_retention	FALSE	canonical	0	0	junction_2	17.9362449996673	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCTGTTTTATTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	12807021	12907287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12807353_12856649_12856773_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933
ES.32490.11	chr8	+	3387	26	NNC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	24.2789126609904	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTGACCTCTTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	12807022	12901729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897578_12897739_12897886_12898802_12898860_12899774_12899903_12901036_12901173_12901632
ES.32490.13	chr8	+	3849	25	ISM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	8	16997	8	7	5prime_fragment	FALSE	canonical	3	50	junction_9	10.6092203085597	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGACCTCTTCTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	12807023	12901731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036
ES.32490.14	chr8	+	7468	31	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.3790742347798	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGAGGTTTATTTTGC	NA	False	NA	-1	True	ATTAAA	-13	NA	12807027	12918726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807212_12807257_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32490.18	chr8	+	5126	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-17	769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	20.5690160995996	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	NA	False	NA	NA	False	NA	NA	NA	12807051	12916339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878651_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ES.32490.2	chr8	+	5660	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-79	1968	-79	1190	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGATGCACCTT	NA	False	NA	NA	False	ACTAAA	-29	NA	12806934	12916760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ES.32490.20	chr8	+	5102	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-16	769	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	NA	False	NA	NA	False	NA	NA	NA	12807052	12916339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32490.21	chr8	+	9971	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	18.054745654976	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCGGACTGAGAGCCC	NA	False	NA	25	True	ATTAAA	-19	NA	12807057	12918664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911_12914546_12914919
ES.32490.24	chr8	+	6308	28	NNC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_19	17.0931443271973	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTGATGTGCTGC	NA	False	NA	7	True	AATAAA	-14	NA	12807062	12912202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896042_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313
ES.32490.25	chr8	+	5528	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-5	1181	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_29	17.9359409732779	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTACTCATTTGTTG	NA	False	NA	NA	False	ACTAAA	-20	NA	12807063	12916751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913869_12914919
ES.32490.26	chr8	+	5226	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	20.0772586254202	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12807066	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919_12915048_12917213
ES.32490.28	chr8	+	3933	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.8554324747043	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTCTGTGATGTGCT	NA	False	NA	5	True	AATAAA	-12	NA	12807134	12912200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12833134_12833264_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
ES.32490.29	chr8	+	8146	27	ISM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	55296	0	894	0	intron_retention	FALSE	canonical	3	25	junction_26	14.0748211965899	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12862309	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758
ES.32490.3	chr8	+	7611	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-69	12	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCGTGCTGCTGATCTG	NA	False	NA	13	True	ATTAAA	-27	NA	12806944	12918740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32490.30	chr8	+	8314	25	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-2003	769	intron_retention	FALSE	canonical	1	1	junction_24	20.4749169039149	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	3282	False	NA	NA	False	NA	NA	NA	12870396	12916339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12913863_12914919_12915108_12915484
ES.32490.31	chr8	+	3490	23	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	610	100	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	18.5937428380429	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGAGTCAATTTGCTG	5895	False	NA	NA	False	NA	NA	NA	12873009	12915670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32490.32	chr8	+	5945	18	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-4052	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	22.0882157123748	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGGACTGAGAGCCCAGT	7170	False	NA	28	True	ATTAAA	-22	NA	12881112	12918667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913869_12914919
ES.32490.33	chr8	+	4372	17	ISM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	75611	1366	-2540	-1305	3prime_fragment	FALSE	canonical	3	17	junction_16	20.6336156247518	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTAAGCATCTTCTTTT	8682	False	NA	NA	False	AAAACA	-14	NA	12882624	12917362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ES.32490.34	chr8	+	1902	9	NIC	ENSMUSG00000031441.16	novel	5528	15	NA	NA	-5658	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	27.0020253869964	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTCAAATGTGAC	NA	False	NA	NA	False	AATAAA	-11	NA	12892196	12901720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12901632
ES.32490.35	chr8	+	1632	11	NIC	ENSMUSG00000031441.16	novel	5528	15	NA	NA	-3453	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	16.7633528865797	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTGATGTGCTGC	NA	False	NA	7	True	AATAAA	-14	NA	12894401	12912202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
ES.32490.36	chr8	+	5261	12	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-3453	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	26.7012860680146	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAGGTTTATTTTGCGTG	NA	False	NA	2	True	ATTAAA	-16	NA	12894401	12918729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913869_12914919
ES.32490.37	chr8	+	5001	11	ISM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	89026	0	-1815	0	3prime_fragment	FALSE	canonical	3	17	junction_10	24.9487474635501	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12896039	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ES.32490.38	chr8	+	4833	10	ISM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	89024	64	-1815	-3	3prime_fragment	FALSE	canonical	3	7	junction_9	24.3356163312586	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCGGACTGAGAGCCC	NA	False	NA	25	True	ATTAAA	-19	NA	12896039	12918664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919
ES.32490.39	chr8	+	1443	9	NIC	ENSMUSG00000031441.16	novel	5528	15	NA	NA	-336	286	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	18.2208671582886	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGTTGAGGAAGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	12897518	12912491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
ES.32490.4	chr8	+	7470	29	FSM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	-27	0	-25	0	multi-exon	FALSE	canonical	3	7	junction_28	15.8999983955846	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12806988	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919
ES.32490.40	chr8	+	3221	4	FSM	ENSMUSG00000031441.16	ENSMUST00000143359.8	604	4	-2620	3	-2620	0	multi-exon	FALSE	canonical	3	30	junction_3	25.3683967872539	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTGTGATGTGCTGC	NA	False	NA	7	True	AATAAA	-14	NA	12904339	12912202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12907000_12907882_12907987_12909313_12909480_12911911
ES.32490.41	chr8	+	6876	1	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	288	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12911852	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12911900_12918700
ES.32490.42	chr8	+	3997	1	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	776	767	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACCGTGTGCTTGAACT	NA	False	NA	NA	False	NA	NA	NA	12912340	12916337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12912300_12916300
ES.32490.43	chr8	+	3236	1	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	1949	1179	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATCTTACTCATTTGT	NA	False	NA	NA	False	ACTAAA	-18	NA	12913513	12916749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12913500_12916700
ES.32490.5	chr8	+	7572	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	-23	0	-23	0	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12806990	12918728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ES.32490.6	chr8	+	7566	30	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	20.8221047822362	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGAGGTTTATTTTGC	NA	False	NA	-1	True	ATTAAA	-13	NA	12807010	12918726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911724_12911845_12914919
ES.32490.7	chr8	+	3932	29	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	12.9998037661798	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATGTGCTGCTTT	NA	False	NA	10	True	AATAAA	-17	NA	12807011	12912205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
ES.32490.8	chr8	+	5433	34	NNC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-2	769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8895811176513	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	NA	False	NA	NA	False	NA	NA	NA	12807011	12916339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12807353_12843804_12843873_12844359_12844435_12846429_12846516_12846662_12846724_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32490.9	chr8	+	5567	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	-2	1193	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTGATGCACCTTCTG	NA	False	NA	NA	False	ACTAAA	-32	NA	12807011	12916763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
ES.32491.1	chr8	+	5286	31	NNC	ENSMUSG00000031442.22	novel	5313	29	NA	NA	-567	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5251550529619	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCATTTCTGGTTATGT	7316	False	NA	15	True	AATAAA	-22	NA	12923238	13070505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12923580_12929977_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061386_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
ES.32491.10	chr8	+	3220	1	Intergenic	novelGene_26504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCAAGAGTTCTTGATA	2079	False	NA	NA	False	AAAAAG	-4	NA	12933813	12937033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_12933800_12937000
ES.32491.11	chr8	+	5155	29	NIC	ENSMUSG00000031442.22	novel	6081	28	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	1	junction_1	7.82615643146723	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCAGTAGCATTTCT	NA	False	NA	7	True	AATAAA	-14	NA	12965251	13070497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12965496_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.12	chr8	+	5044	30	FSM	ENSMUSG00000031442.22	ENSMUST00000110879.9	3664	30	-180	-1200	-98	0	multi-exon	FALSE	canonical	2	4	junction_1	8.71015643993181	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTGGTTATGTGTTA	NA	False	NA	19	True	AATAAA	-26	NA	12965794	13070509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
ES.32491.13	chr8	+	5142	29	ISM	ENSMUSG00000031442.22	ENSMUST00000110879.9	3664	30	-145	-1194	-63	2	intron_retention	FALSE	canonical	2	4	junction_1	7.42548012602827	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGCATTTCTGGTTAT	NA	False	NA	13	True	AATAAA	-20	NA	12965829	13070503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.14	chr8	+	8798	28	NNC	ENSMUSG00000031442.22	novel	3664	30	NA	NA	-60	-1	intron_retention	FALSE	canonical	0	0	junction_23	9.53716289021599	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	NA	False	NA	10	True	AATAAA	-17	NA	12965832	13070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061788_13062800_13062880_13062997_13063065_13063534_13067469_13068060_13068174_13068695
ES.32491.15	chr8	+	7335	29	NNC	ENSMUSG00000031442.22	novel	3664	30	NA	NA	25	1	intron_retention	FALSE	canonical	0	0	junction_28	9.37212540963241	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAGCATTTCTGGTTA	NA	False	NA	12	True	AATAAA	-19	NA	12965935	13070502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13067469_13068060_13068174_13068695_13068800_13070195
ES.32491.16	chr8	+	4940	30	NIC	ENSMUSG00000031442.22	novel	3664	30	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_29	9.24009255066353	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	NA	False	NA	10	True	AATAAA	-17	NA	12965942	13070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068885
ES.32491.17	chr8	+	5436	29	NIC	ENSMUSG00000031442.22	novel	3215	28	NA	NA	-418	1	intron_retention	FALSE	canonical	2	7	junction_1	7.04604028327041	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTAGCATTTCTGGTTA	NA	False	NA	12	True	AATAAA	-19	NA	12976213	13070502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12976734_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.18	chr8	+	5207	30	NIC	ENSMUSG00000031442.22	novel	3215	28	NA	NA	-108	-1	intron_retention	FALSE	canonical	0	0	junction_27	10.3086724511507	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTGGTTATGTGTT	NA	False	NA	18	True	AATAAA	-25	NA	12976523	13070508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12976734_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13064818_13064894_13067346_13067469_13068060_13068174_13068695
ES.32491.2	chr8	+	5341	30	NNC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	9.8492803505888	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	7883	False	NA	10	True	AATAAA	-17	NA	12923805	13070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12924062_12929977_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053886_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.3	chr8	+	5348	30	NNC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	8.12242824935216	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCATTTCTGGTTATGT	7883	False	NA	15	True	AATAAA	-22	NA	12923805	13070505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12923966_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.4	chr8	+	5284	30	NNC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-10	-4	intron_retention	FALSE	canonical	2	2	junction_1	7.86751172765443	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCAGTAGCATTTCT	7894	False	NA	7	True	AATAAA	-14	NA	12923816	13070497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12924017_12929977_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.5	chr8	+	5334	30	FSM	ENSMUSG00000031442.22	ENSMUST00000095456.10	3926	30	44	-1452	44	0	multi-exon	FALSE	canonical	3	19	junction_2	5.78098074781942	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCATTTCTGGTTATGT	7948	False	NA	15	True	AATAAA	-22	NA	12923870	13070505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.6	chr8	+	5334	30	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	6	junction_1	7.385430913229	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	7988	False	NA	10	True	AATAAA	-17	NA	12923910	13070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12924062_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.7	chr8	+	5671	32	NNC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-8	-4	intron_retention	FALSE	canonical	0	0	junction_4	10.8623973108237	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCAGTAGCATTTCT	8017	False	NA	7	True	AATAAA	-14	NA	12923939	13070497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13033774_13033896_13034354_13034648_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ES.32491.8	chr8	+	9510	28	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	6	junction_1	7.55954869063198	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAGACTCAGTAGCATT	8021	False	NA	4	True	AATAAA	-11	NA	12923943	13070494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12924062_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13067469_13068060_13068174_13068695
ES.32491.9	chr8	+	5109	31	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_30	7.40577852460871	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTAGCATTTCTGGT	8029	False	NA	10	True	AATAAA	-17	NA	12923951	13070500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
ES.32492.1	chr8	-	1115	2	FSM	ENSMUSG00000086770.2	ENSMUST00000153095.2	406	2	0	-709	0	709	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATACTTTCATGTGTGCA	NA	False	NA	NA	False	TTTAAA	-15	NA	12965758	12961816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_12962596_12965422
ES.32492.2	chr8	-	2561	1	NIC	ENSMUSG00000086770.2	novel	406	2	NA	NA	9	-663	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGACTTTCCTCAGGTA	NA	False	NA	NA	False	NA	NA	NA	12965749	12963188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_12963200_12965700
ES.32493.1	chr8	+	472	1	Intergenic	novelGene_26506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTATATATAATTAAATA	1031	False	NA	NA	False	NA	NA	NA	13139695	13140167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13139700_13140200
ES.32494.1	chr8	+	4301	2	Antisense	novelGene_ENSMUSG00000038542.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7135	False	NA	NA	False	NA	NA	NA	13147273	13151612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_13148489_13148526
ES.32495.1	chr8	+	3509	20	NNC	ENSMUSG00000031446.15	novel	2570	16	NA	NA	-734	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	112.151386607592	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13154886	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13154951_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.10	chr8	+	3118	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-54	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTTTAGTTATGTTT	NA	False	NA	47	True	NA	NA	NA	13155685	13197395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.11	chr8	+	3708	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-51	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.293236076653	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTACTTTACTAATA	NA	False	NA	20	True	AATAAA	-17	NA	13155688	13197934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183296_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.13	chr8	+	3624	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.560320583538	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	21	True	AATAAA	-18	NA	13155694	13197935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156285_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.14	chr8	+	3372	18	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	117.288453459319	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155697	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13194276_13194430_13196531
ES.32495.16	chr8	+	3463	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-18	10	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	84.9753475343368	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATTGGCTATGTAGAT	NA	False	NA	36	True	AATAAA	-33	NA	13155721	13197950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.17	chr8	+	3534	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.6051804132218	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155721	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13171665_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.18	chr8	+	3299	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-18	251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.137522144205	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTGTTTAAAGCAATAT	NA	False	NA	NA	False	ATTAAA	-27	NA	13155721	13197613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165575_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190309_13192486_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.19	chr8	+	4696	21	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-18	1297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	111.251471900375	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGTGTACCAAGTGT	NA	False	NA	NA	False	NA	NA	NA	13155721	13199237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531_13198778_13199005
ES.32495.2	chr8	+	3569	21	NNC	ENSMUSG00000031446.15	novel	2570	16	NA	NA	-725	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	137.874680416674	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	False	NA	23	True	AATAAA	-20	NA	13154895	13197937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13154951_13156193_13156310_13164813_13164886_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.21	chr8	+	2824	9	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-15	-7012	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	113.86717865566	422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	13155724	13185580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648
ES.32495.23	chr8	+	3502	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-15	-176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.293236076653	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCATTTCTATATTTGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	13155724	13197764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183296_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.24	chr8	+	3347	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-15	-277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTATGCTAAATTATTA	NA	False	NA	NA	False	AATATA	-18	NA	13155724	13197663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.25	chr8	+	3607	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	144.780165764831	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	False	NA	23	True	AATAAA	-20	NA	13155725	13197937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13194803_13194907_13196531
ES.32495.28	chr8	+	3620	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.137522144205	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155725	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165575_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190309_13192486_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.29	chr8	+	3507	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112.571088650683	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155725	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.3	chr8	+	5652	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-725	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.74260589542	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCATTTCTATATTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	13154895	13197762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13157687_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.30	chr8	+	3355	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-14	-94	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	84.9753475343368	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATTTTTAAGTTCATT	NA	False	NA	-68	True	AATAGA	-14	NA	13155725	13197846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.32	chr8	+	3356	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-11	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.560320583538	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATGTTTAAGATA	NA	False	NA	NA	False	ATTAAA	-17	NA	13155728	13197701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156285_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.33	chr8	+	3787	22	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.310122470305	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	21	True	AATAAA	-18	NA	13155728	13197935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165530_13168044_13168121_13169019_13169162_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.34	chr8	+	3568	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	141.627344496539	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTACTTTACTAATAC	NA	False	NA	21	True	AATAAA	-18	NA	13155728	13197935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13164813_13164886_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.35	chr8	+	3208	18	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-9	-232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	137.26407252277	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTTAAGATACAACATC	NA	False	NA	NA	False	ATTAAA	-24	NA	13155730	13197708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174792_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190309_13192486_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.36	chr8	+	3710	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_3	87.7815927441019	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155730	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.4	chr8	+	4464	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-724	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGGCTATGTAGATGA	NA	False	NA	38	True	AATAAA	-35	NA	13154896	13197952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.40	chr8	+	3591	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.38071086198	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTAAATTACTTTACTA	NA	False	NA	17	True	AATAAA	-14	NA	13155739	13197931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186804_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.42	chr8	+	3693	21	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	123.747080773649	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGGCTATGTAGATGA	NA	False	NA	38	True	AATAAA	-35	NA	13155739	13197952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13164813_13164886_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.44	chr8	+	3314	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112.571088650683	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCATTTCTATATTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	13155740	13197762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.45	chr8	+	3372	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	250	intron_retention	FALSE	non_canonical	0	0	junction_3	87.7815927441019	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGTGTTTAAAGCAATA	NA	False	NA	NA	False	ATTAAA	-26	NA	13155740	13197612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.46	chr8	+	3033	17	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	-239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135.676761435959	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATGTTTAAGATA	NA	False	NA	NA	False	ATTAAA	-17	NA	13155740	13197701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13192961_13193135_13194276_13194430_13196531
ES.32495.48	chr8	+	3638	21	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	-96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	138.908414072006	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTATTTTTAAGTTCA	NA	False	NA	-70	True	AATAGA	-12	NA	13155740	13197844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13164813_13164886_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183296_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.5	chr8	+	4324	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-693	-97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTATTTTTAAGTTC	NA	False	NA	-71	True	AATAGA	-11	NA	13154927	13197843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.51	chr8	+	2918	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112.571088650683	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTTGGATCTCTGCC	NA	False	NA	18	True	AATAAA	-31	NA	13155740	13197366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.52	chr8	+	3794	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.086253028986	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	False	NA	23	True	AATAAA	-20	NA	13155741	13197937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13184032_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.55	chr8	+	2791	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	2	-238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5342344512295	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTTTCTAAATGAGGTC	NA	False	NA	NA	False	NA	NA	NA	13155741	13197124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.56	chr8	+	3596	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.137522144205	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	False	NA	23	True	AATAAA	-20	NA	13155743	13197937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192498_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.57	chr8	+	3446	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.047829645505	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTACTTTACTAATA	NA	False	NA	20	True	AATAAA	-17	NA	13155743	13197934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13196531
ES.32495.58	chr8	+	4744	20	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.700392721377	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAATTACTTTACTAAT	NA	False	NA	19	True	AATAAA	-16	NA	13155747	13197933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177705_13178072_13182270_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.60	chr8	+	2441	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	14	260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.6051804132218	437	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGCTCTCGTTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	13155753	13196879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13171665_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.62	chr8	+	5203	18	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	7657	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.3502277257308	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	4010	False	NA	23	True	AATAAA	-20	NA	13163592	13197937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.63	chr8	+	2918	16	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	17184	239	-720	-239	3prime_fragment	FALSE	canonical	3	306	junction_7	29.6802216224131	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCATGTTTAAGATA	213	False	NA	NA	False	ATTAAA	-17	NA	13172804	13197701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.64	chr8	+	4968	14	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	78	0	intron_retention	FALSE	canonical	3	311	junction_6	28.9545655105603	431	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	1011	False	NA	26	True	AATAAA	-23	NA	13173602	13197940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.65	chr8	+	174	1	Intergenic	novelGene_26507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGATTTTTTAAA	5544	False	NA	NA	False	NA	NA	NA	13180138	13180312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13180100_13180300
ES.32495.8	chr8	+	3764	21	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	44	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	129.790398335162	439	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTACTTTACTAATA	NA	False	NA	20	True	AATAAA	-17	NA	13155664	13197934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156310_13165469_13165576_13171678_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13181601_13181688_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ES.32495.9	chr8	+	3389	19	NNC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	-58	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.375326585879	439	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATCATTTCTATATTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	13155681	13197762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13155904_13156193_13156285_13171656_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190322_13192492_13192599_13192961_13193139_13194276_13194430_13196531
ES.32496.1	chr8	-	3257	5	ISM	ENSMUSG00000038542.15	ENSMUST00000168164.8	2678	11	24093	-1729	5317	1729	3prime_fragment	FALSE	canonical	3	249	junction_3	26.9258240356725	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCTTTGGCCCCTTAT	NA	False	NA	NA	False	ATTAAA	-29	NA	13131366	13125459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263
ES.32496.10	chr8	-	2382	12	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	293	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	88.7356553417262	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13155166	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145871_13150366_13150415_13154774
ES.32496.11	chr8	-	2225	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.1979915149282	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13154825	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145870_13147599_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.13	chr8	-	2321	15	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	123.871724302331	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13154821	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13147966_13148066_13148562_13148637_13150324_13150415_13154774
ES.32496.15	chr8	-	2109	15	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.711064749114	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13154829	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128097_13128217_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.16	chr8	-	2262	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	111.687168773495	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13154821	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154734
ES.32496.18	chr8	-	2248	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	109.96884981209	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13154810	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13145991_13146093_13148562_13148637_13150324_13150415_13154774
ES.32496.19	chr8	-	2357	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.1979915149282	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCATTTGTGTTTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	13154812	13127190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147459_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.2	chr8	-	2857	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-4	630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.1979915149282	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGCCTGGTCAAGG	NA	False	NA	NA	False	NA	NA	NA	13154825	13126558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.20	chr8	-	6283	5	ISM	ENSMUSG00000038542.15	ENSMUST00000168164.8	2678	11	19336	2	560	-2	intron_retention	FALSE	canonical	3	249	junction_3	26.9258240356725	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCATTTGTGTTTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	13136123	13127190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263
ES.32496.22	chr8	-	2766	7	ISM	ENSMUSG00000038542.15	ENSMUST00000168164.8	2678	11	17782	329	-994	-329	3prime_fragment	FALSE	canonical	3	249	junction_3	32.1580299286024	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGTTAGTCTAATGTA	NA	False	NA	NA	False	AAGAAA	-2	NA	13137677	13127517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250
ES.32496.23	chr8	-	1899	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-2	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.1979915149282	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGCAAGAGTTAGTC	NA	False	NA	NA	False	NA	NA	NA	13154833	13127524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.24	chr8	-	244	1	Intergenic	novelGene_26505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	13133403	13133159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13133200_13133400
ES.32496.3	chr8	-	3328	13	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	114.359174679312	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGTCCGCATGT	NA	False	NA	0	True	AATAAA	-23	NA	13154819	13127182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144768_13145452_13146093_13148562_13148637_13150324_13150415_13154774
ES.32496.4	chr8	-	2899	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-33	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.1979915149282	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTTGTCCGCATG	NA	False	NA	-1	True	AATAAA	-22	NA	13155492	13127183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.5	chr8	-	2204	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	110.269331383604	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTTGTCCGCATG	NA	False	NA	-1	True	AATAAA	-22	NA	13154825	13127183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131377_13135362_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.6	chr8	-	2089	12	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	88.7356553417262	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGTGTTTTGTCCGCA	NA	False	NA	-3	True	AATAAA	-20	NA	13154822	13127185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13150324_13150415_13154774
ES.32496.7	chr8	-	7082	13	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	109	0	intron_retention	FALSE	non_canonical	0	0	junction_9	87.6281204865196	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	-6	True	AATAAA	-17	NA	13155350	13127188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32496.8	chr8	-	4121	6	NIC	ENSMUSG00000038542.15	novel	2678	11	NA	NA	-1890	-1	intron_retention	FALSE	canonical	3	287	junction_2	21.996363335788	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13138573	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13128290_13128547_13128672_13129637_13129969_13131263_13131365_13135322_13135465_13136250
ES.32496.9	chr8	-	2756	13	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	115.632559812922	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCATTTGTGTTTTGTC	NA	False	NA	-7	True	AATAAA	-16	NA	13155459	13127189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ES.32497.1	chr8	-	194	1	Intergenic	novelGene_26508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATAAGAATGCTTATAT	7347	False	NA	NA	False	NA	NA	NA	13194073	13193879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13193900_13194100
ES.32498.1	chr8	+	2743	8	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	-47	1	-47	-1	intron_retention	FALSE	canonical	3	2416	junction_1	197.640159514865	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACGTGTCCTTCTGTGA	8155	False	NA	20	True	AATAAA	-21	NA	13209113	13225337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779
ES.32498.10	chr8	+	2106	10	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	72	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1185.31496048753	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGACGTGTCCTTC	8274	False	NA	15	True	AATAAA	-16	NA	13209232	13225332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221202_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418_13224841_13224887
ES.32498.11	chr8	+	2275	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	73	-119	73	119	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTTGTCATGGCT	8275	False	NA	NA	False	ACTAAA	-17	NA	13209233	13225457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.12	chr8	+	1556	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	73	600	73	-600	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTAACTGGGTTAA	8275	False	NA	NA	False	NA	NA	NA	13209233	13224738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.14	chr8	+	5380	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	82	-6	intron_retention	FALSE	canonical	3	2416	junction_1	221.014359123509	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGACGTGTCCTTC	8284	False	NA	15	True	AATAAA	-16	NA	13209242	13225332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.16	chr8	+	1459	5	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	84	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1235.49005965244	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8286	False	NA	13	True	AATAAA	-14	NA	13209244	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13215848_13215968_13223626_13223694_13223779_13223951_13224418
ES.32498.18	chr8	+	2592	1	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	85	-12047	mono-exon	FALSE	NA	NA	NA	NA	NA	1231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATGGTATGGTTGCC	8287	False	NA	NA	False	NA	NA	NA	13209245	13211837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209200_13211800
ES.32498.19	chr8	+	9995	5	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	88	-8	intron_retention	FALSE	canonical	0	0	junction_4	1235.75874971614	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8290	False	NA	13	True	AATAAA	-14	NA	13209248	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13224418
ES.32498.2	chr8	+	2564	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	-33	-302	-33	302	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGATCTGTCCACCT	8169	False	NA	31	True	ATTAAA	-42	NA	13209127	13225640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.20	chr8	+	2093	10	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	91	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	913.213671533964	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8293	False	NA	13	True	AATAAA	-14	NA	13209251	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217227_13217263_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.23	chr8	+	1980	9	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	97	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1238.07576883444	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGGACGTGTCCTT	8299	False	NA	14	True	AATAAA	-15	NA	13209257	13225331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221296_13222573_13222661_13223626_13223670_13223779_13223951_13224418
ES.32498.24	chr8	+	1947	11	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	113	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1302.33846983033	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8315	False	NA	13	True	AATAAA	-14	NA	13209273	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217191_13217256_13217349_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418_13224774_13224839
ES.32498.27	chr8	+	2001	10	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	117	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	913.213671533964	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8319	False	NA	13	True	AATAAA	-14	NA	13209277	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418_13224692_13224794
ES.32498.28	chr8	+	3492	7	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	124	-8	intron_retention	FALSE	canonical	3	2416	junction_1	218.570672526963	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8326	False	NA	13	True	AATAAA	-14	NA	13209284	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13215848_13215968_13217157_13217966_13221204_13221384_13222540_13223694_13223779_13223951_13224418
ES.32498.29	chr8	+	2515	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	135	-8	intron_retention	FALSE	canonical	3	2416	junction_1	221.559408350382	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8337	False	NA	13	True	AATAAA	-14	NA	13209295	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13215848_13215968_13217157_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.3	chr8	+	2264	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	-33	-2	-33	2	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTCCTTCTGTGACCC	8169	False	NA	23	True	AATAAA	-24	NA	13209127	13225340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.30	chr8	+	3052	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	135	-8	combination_of_known_junctions	FALSE	canonical	3	2416	junction_1	207.343548100189	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8337	False	NA	13	True	AATAAA	-14	NA	13209295	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13223694_13223779_13223951_13224418
ES.32498.31	chr8	+	2630	7	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	145	8	145	-8	intron_retention	FALSE	canonical	3	2416	junction_1	212.274520897404	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8347	False	NA	13	True	AATAAA	-14	NA	13209305	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626
ES.32498.32	chr8	+	2414	10	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	145	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1210.66034424846	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8347	False	NA	13	True	AATAAA	-14	NA	13209305	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13214824_13215160_13215845_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.33	chr8	+	3469	5	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	-6769	-10	intron_retention	FALSE	canonical	3	2592	junction_3	149.225291087	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTCTGGACGTGTC	NA	False	NA	11	True	AATAAA	-12	NA	13216411	13225328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779
ES.32498.34	chr8	+	5503	3	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	-2554	2034	intron_retention	FALSE	canonical	3	2844	junction_2	39.5	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGGCGCCTGGCAGG	NA	False	NA	NA	False	NA	NA	NA	13220626	13227372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13221384_13222540_13223694_13223779
ES.32498.35	chr8	+	4685	2	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	12522	-1995	-1498	1995	intron_retention	FALSE	canonical	3	2592	junction_1	0	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13221682	13227333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13222661_13223626
ES.32498.36	chr8	+	2088	2	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	13426	-302	-594	302	intron_retention	FALSE	canonical	3	2592	junction_1	0	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGATCTGTCCACCT	NA	False	NA	31	True	ATTAAA	-42	NA	13222586	13225640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13222661_13223626
ES.32498.4	chr8	+	2116	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	-14	-8	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1013.26761781186	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGGACGTGTCCT	8188	False	NA	13	True	AATAAA	-14	NA	13209146	13225330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13209435_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.5	chr8	+	1733	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	0	496	0	-496	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTTGGTGTTTGGTTCT	8202	False	NA	NA	False	NA	NA	NA	13209160	13224842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ES.32498.8	chr8	+	2163	9	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	50	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	960.906050298363	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTCTGGACGTGTCC	8252	False	NA	12	True	AATAAA	-13	NA	13209210	13225329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223687_13223779_13223951_13224418
ES.32499.1	chr8	-	3581	1	Antisense	novelGene_ENSMUSG00000031447.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAAAGGCAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	13216947	13213366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_13213400_13216900
ES.32499.2	chr8	-	3051	2	Antisense	novelGene_ENSMUSG00000031447.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	13216757	13213382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_13216381_13216704
ES.325.1	chr1	+	299	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAAAATAAAATA	8564	False	NA	NA	False	NA	NA	NA	38007339	38007638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38007300_38007600
ES.3250.1	chr10	+	5139	1	Intergenic	novelGene_2542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATGAAATACAACACC	NA	False	NA	NA	False	NA	NA	NA	79396504	79401643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79396500_79401600
ES.32500.1	chr8	-	1616	8	NIC	ENSMUSG00000038515.11	novel	1408	7	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	134.762678779537	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCTGTGCTCATGGT	3645	False	NA	NA	False	NA	NA	NA	13250612	13222020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.10	chr8	-	3960	6	NIC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	5	-2	intron_retention	FALSE	canonical	3	356	junction_1	25.6312309497613	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCTCCATTTTTTCC	3645	False	NA	-23	True	TTTAAA	-16	NA	13250612	13226923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13229322_13229756_13236882_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.11	chr8	-	3997	8	NIC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	5	-3	intron_retention	FALSE	canonical	2	3	junction_2	173.749761415194	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTTCTCCATTTTTTC	3645	False	NA	-24	True	TTTAAA	-15	NA	13250612	13226924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13228805_13228918_13229322_13229509_13229582_13229756_13236882_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.12	chr8	-	1307	9	NNC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.799252071803	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTGTTCTCCATTT	3653	False	NA	-28	True	TTTAAA	-11	NA	13250604	13226928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13238483_13238561_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.13	chr8	-	3847	7	NIC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	341	junction_2	30.5723186341283	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTGTTCTCCATTT	3679	False	NA	-28	True	TTTAAA	-11	NA	13250578	13226928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.14	chr8	-	1350	9	NIC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	164.025150510524	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTGTTCTCCATTT	3645	False	NA	-28	True	TTTAAA	-11	NA	13250612	13226928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13228805_13228918_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.15	chr8	-	3458	6	NIC	ENSMUSG00000038515.11	novel	1416	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	349	junction_2	27.7604034552814	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTGTTCTCCATTT	3679	False	NA	-28	True	TTTAAA	-11	NA	13250578	13226928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.16	chr8	-	1154	8	NNC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	178.814120795642	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTAGTGTTCTCCATT	3653	False	NA	-29	True	TTTAAA	-10	NA	13250604	13226929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13227155_13229322_13229422_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.17	chr8	-	1055	7	NIC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	87	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	170.155566076067	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTAGTGTTCTCCATT	NA	False	NA	-29	True	TTTAAA	-10	NA	13242168	13226929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13228805_13228948_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049
ES.32500.18	chr8	-	1281	7	NIC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	349	junction_3	28.7440815164135	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATGACTTAAAATTA	3663	False	NA	-41	True	NA	NA	NA	13250594	13226941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13227143_13229322_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.2	chr8	-	6143	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	10	-3140	7	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTCTGTGCTCATGG	3647	False	NA	NA	False	NA	NA	NA	13250610	13222021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.3	chr8	-	3521	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	10	-518	7	518	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGCCTCCCTTCCAC	3647	False	NA	NA	False	GATAAA	-25	NA	13250610	13224643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.4	chr8	-	3536	8	NNC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	4	506	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	136.644929414501	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGCCAGAAAGTGTG	3644	False	NA	NA	False	AGTAAA	-43	NA	13250613	13224655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13227143_13229322_13229509_13229582_13229780_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.5	chr8	-	3313	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	8	-308	5	308	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAAGTCTTAAAAGTCAA	3645	False	NA	NA	False	AGTAAA	-17	NA	13250612	13224853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.6	chr8	-	3076	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	-5	-58	-5	58	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGAGCACAGAAATATG	3632	False	NA	NA	False	AATAAA	-42	NA	13250625	13225103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.7	chr8	-	1327	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	-22	1708	-22	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCATGATCTTAGTTGG	3615	False	NA	-1	True	CATAAA	-17	NA	13250642	13226869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.8	chr8	-	3716	9	NNC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	2	20	intron_retention	FALSE	canonical	0	0	junction_5	187.571819578528	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGGAGTCATAAACTGA	3672	False	NA	-1	True	TTTAAA	-38	NA	13250585	13226901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13227143_13228805_13228948_13229322_13229509_13229582_13229756_13236882_13236980_13237286_13239748_13242049_13242209_13250048_13250201_13250480
ES.32500.9	chr8	-	3354	11	NNC	ENSMUSG00000038515.11	novel	1271	9	NA	NA	-760	18	intron_retention	FALSE	canonical	0	0	junction_5	194.246647332715	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTGGAGTCATAAACT	2877	False	NA	-3	True	TTTAAA	-36	NA	13251380	13226903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13227143_13228805_13228948_13229322_13229509_13229582_13229756_13236882_13236980_13238080_13238284_13238483_13239748_13242049_13242209_13250048_13250201_13250480_13250923_13251083
ES.32501.1	chr8	+	185	1	Intergenic	novelGene_26509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	13256136	13256321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13256100_13256300
ES.32502.1	chr8	-	175	1	Intergenic	novelGene_26510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAGAAAAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	13262230	13262055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13262100_13262200
ES.32503.1	chr8	-	280	1	Intergenic	novelGene_26511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAATAAAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	13268621	13268341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13268300_13268600
ES.32503.2	chr8	-	174	1	Intergenic	novelGene_26512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAGCAAAGGTCCTGAAT	NA	False	NA	0	True	NA	NA	NA	13268621	13268447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13268400_13268600
ES.32504.1	chr8	-	1350	7	FSM	ENSMUSG00000031448.13	ENSMUST00000033825.11	1372	7	18	4	18	-4	multi-exon	TRUE	canonical	1	1	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATTTTTCCTCACCTT	2516	False	NA	NA	False	TATAAA	-16	NA	13304144	13285658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13285989_13292251_13292385_13292518_13292647_13295468_13295610_13296041_13296168_13298552_13298718_13303817
ES.32505.10	chr8	+	3841	12	NIC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-280	-4	intron_retention	FALSE	canonical	0	0	junction_8	22.4962806843287	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTATTAGTTTTAAT	NA	False	NA	1	True	AATAAA	-13	NA	13337909	13371392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13363805_13363957_13364557_13364651_13368842_13369913_13370760
ES.32505.11	chr8	+	4517	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-277	-575	-277	543	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTTTCCTGTTTCTCAG	NA	False	NA	NA	False	ATTAAA	-11	NA	13337912	13348192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
ES.32505.12	chr8	+	3693	8	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-43	7155	intron_retention	FALSE	canonical	3	20	junction_6	13.6844914455178	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGAATGTGATTGTGT	NA	False	NA	NA	False	AATAAA	-12	NA	13338146	13361240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144
ES.32505.13	chr8	+	3341	5	FSM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-43	-575	-43	543	multi-exon	FALSE	canonical	3	38	junction_3	9.44391338376205	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCTTTCCTGTTTCTCAG	NA	False	NA	NA	False	ATTAAA	-11	NA	13338146	13348192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979
ES.32505.14	chr8	+	5995	12	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-33	-2	intron_retention	FALSE	canonical	0	0	junction_8	19.4621905114541	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTAGTTTTAATTT	NA	False	NA	3	True	AATAAA	-15	NA	13338156	13371394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13364557_13364651_13368842_13368923_13369762_13369913_13370760
ES.32505.15	chr8	+	2733	9	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-12	7168	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	12.8640730330638	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTAAAGTGCCTGACC	NA	False	NA	NA	False	AATAAA	-25	NA	13338177	13361253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144
ES.32505.16	chr8	+	4333	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-4	6	-2	-6	multi-exon	FALSE	canonical	3	15	junction_7	13.4873912311545	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGATGTTGCTTTCCTG	NA	False	NA	NA	False	AATAGA	-16	NA	13338206	13372918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ES.32505.17	chr8	+	8780	10	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	20	junction_7	13.4329611197399	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTAGTTTTAATTT	NA	False	NA	3	True	AATAAA	-15	NA	13338215	13371394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13363957_13368842_13369913_13370760
ES.32505.18	chr8	+	2747	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	16.0770713198089	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTTTAATTTGATTTT	NA	False	NA	9	True	AATAAA	-21	NA	13338215	13371400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360203_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ES.32505.19	chr8	+	2565	9	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	5	7126	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	19.5959179422654	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGATAAACAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	13338215	13361211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360235
ES.32505.2	chr8	+	3066	5	FSM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-306	-37	-306	5	multi-exon	FALSE	canonical	3	38	junction_3	9.44391338376205	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGGGTCAAAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	13337883	13347654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979
ES.32505.20	chr8	+	1470	7	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	8	-3112	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	19.1434642168606	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTTCTCTTGAAGAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	13338218	13350973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13350781
ES.32505.21	chr8	+	2701	6	NNC	ENSMUSG00000038497.8	novel	2208	6	NA	NA	-6	-922	intron_retention	TRUE	non_canonical	0	0	junction_5	21.0675105316219	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACACGTTTTTAATAAA	NA	False	NA	NA	False	NA	NA	NA	13338231	13353163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13347603_13353128
ES.32505.22	chr8	+	1327	8	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-1744	-6869	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	10.8062717994728	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAGGCAAAGACTTAT	3051	False	NA	NA	False	TATAAA	-14	NA	13342709	13364037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805
ES.32505.23	chr8	+	1410	7	NIC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	3774	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.1055541659718	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTAGTTTTAATTT	8569	False	NA	3	True	AATAAA	-15	NA	13348227	13371394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13348306_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ES.32505.24	chr8	+	1886	2	ISM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	20173	10977	-1831	7862	internal_fragment	FALSE	canonical	3	31	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCTGGTATTATTTTTA	3941	False	NA	NA	False	NA	NA	NA	13358383	13361947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13358467_13360144
ES.32505.4	chr8	+	2123	1	FSM	ENSMUSG00000038497.8	ENSMUST00000211402.2	1802	1	-323	2	-304	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-38	NA	13337885	13340008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13337900_13340000
ES.32505.5	chr8	+	3125	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-296	4	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_7	12.8344155387856	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTTTAATTTGATTTT	NA	False	NA	9	True	AATAAA	-21	NA	13337893	13371400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ES.32505.6	chr8	+	3995	12	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-288	-4	intron_retention	FALSE	canonical	2	6	junction_7	16.7406073331973	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTATTAGTTTTAAT	NA	False	NA	1	True	AATAAA	-13	NA	13337901	13371392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360203_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ES.32505.7	chr8	+	3989	4	ISM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	-287	-37	-287	5	intron_retention	FALSE	canonical	3	38	junction_3	9.41629792788369	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATGGGTCAAAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	13337902	13347654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845
ES.32505.8	chr8	+	2951	9	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-280	7174	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	18.4183162911272	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGCCTGACCTCTGGT	NA	False	NA	NA	False	AATAAA	-31	NA	13337909	13361259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360203
ES.32505.9	chr8	+	3179	10	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	-280	-6010	intron_retention	FALSE	canonical	3	20	junction_7	12.6442296408234	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAGCAAATATCTAAATT	NA	False	NA	NA	False	NA	NA	NA	13337909	13364896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805
ES.32506.1	chr8	-	2879	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	-26	0	-20	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13338151	13305962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32506.2	chr8	-	3042	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	-294	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13338135	13305963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32506.4	chr8	-	2265	4	NNC	ENSMUSG00000038506.14	novel	2729	7	NA	NA	10880	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.5521135891752	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13320712	13305963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13307977_13308946_13309044_13311384_13311468_13320640
ES.32506.5	chr8	-	2555	7	NNC	ENSMUSG00000038506.14	novel	2955	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.925772879665	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGATGTCCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	13337845	13305964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13307764_13307876_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32506.6	chr8	-	2930	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	23	2	16	-1	multi-exon	FALSE	canonical	3	14	junction_2	13.5558105622644	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGATGTCCTTTAT	NA	False	NA	-5	True	AATAAA	-12	NA	13338108	13305965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32506.7	chr8	-	2633	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110839.10	2937	6	300	4	4	-2	multi-exon	FALSE	canonical	2	3	junction_1	17.0105849399719	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGATGTCCTTTA	NA	False	NA	-6	True	AATAAA	-11	NA	13337826	13305966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13307977_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32506.8	chr8	-	2785	8	NNC	ENSMUSG00000038506.14	novel	2748	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.9499878843319	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGATGTCCTTTA	NA	False	NA	-6	True	AATAAA	-11	NA	13337848	13305966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13307977_13308946_13309044_13311384_13311468_13313105_13313139_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ES.32507.1	chr8	-	177	1	Intergenic	novelGene_26513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	7531	False	NA	NA	False	NA	NA	NA	13343478	13343301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13343300_13343500
ES.32508.1	chr8	-	176	1	Antisense	novelGene_ENSMUSG00000038497.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAACTATAT	NA	False	NA	NA	False	NA	NA	NA	13372191	13372015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_13372000_13372200
ES.32509.1	chr8	+	2622	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	-112	1	-112	-1	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTTTCTGTAACT	1991	False	NA	93	True	AATAAA	-23	NA	13388638	13428447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.10	chr8	+	2252	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	-22	281	-22	-275	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2081	False	NA	NA	False	ATTAAA	-23	NA	13388728	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.12	chr8	+	2479	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	317.12997570019	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2095	False	NA	88	True	AATAAA	-18	NA	13388742	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423890_13427141
ES.32509.14	chr8	+	2625	13	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	378.214225010113	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTTTCTGTAAC	2096	False	NA	92	True	AATAAA	-22	NA	13388743	13428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.15	chr8	+	2179	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	-24	266	-7	-266	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTCAATCATTTTT	2096	False	NA	NA	False	ATTAAA	-32	NA	13388743	13428176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.17	chr8	+	3452	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	53	junction_4	376.987055042241	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2120	False	NA	91	True	AATAAA	-21	NA	13388767	13428445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.19	chr8	+	2534	11	NIC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2121	False	NA	88	True	AATAAA	-18	NA	13388768	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.2	chr8	+	2549	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	-128	0	-111	0	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	1992	False	NA	88	True	AATAAA	-18	NA	13388639	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.20	chr8	+	2480	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	319.269129199026	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAAGCTCTGTGTTTCT	2121	False	NA	87	True	AATAAA	-17	NA	13388768	13428441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422941_13423103_13423844_13423924_13427141
ES.32509.21	chr8	+	2251	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	9	-275	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2129	False	NA	NA	False	ATTAAA	-23	NA	13388776	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.22	chr8	+	2387	11	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	454.542462262878	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2134	False	NA	88	True	AATAAA	-18	NA	13388781	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13415088_13415196_13420168_13420275_13420480_13420647_13420878_13421023_13421355_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.23	chr8	+	2579	13	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	393.614976849205	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTCTGTGTTTCTGTA	2137	False	NA	90	True	AATAAA	-20	NA	13388784	13428444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13413623_13413730_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.24	chr8	+	2501	12	NNC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	405.061570669272	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2137	False	NA	88	True	AATAAA	-18	NA	13388784	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13402025_13402123_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.25	chr8	+	2695	13	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	377.101472860202	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTTTCTGTAAC	2137	False	NA	92	True	AATAAA	-22	NA	13388784	13428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.26	chr8	+	2513	12	NNC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	392.487005627928	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2137	False	NA	88	True	AATAAA	-18	NA	13388784	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.27	chr8	+	2800	14	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	451.59213414463	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2137	False	NA	88	True	AATAAA	-18	NA	13388784	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.28	chr8	+	3333	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-887	-746	-4	0	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2139	False	NA	94	True	AATAAA	-24	NA	13388786	13428448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.29	chr8	+	2313	13	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-4	-262	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	371.107314518171	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCAATCATTTTTAATA	2139	False	NA	NA	False	ATTAAA	-36	NA	13388786	13428180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.3	chr8	+	2655	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	417.641726328019	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	1992	False	NA	88	True	AATAAA	-18	NA	13388639	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.30	chr8	+	2250	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-4	-275	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	313.356977010761	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2139	False	NA	NA	False	ATTAAA	-23	NA	13388786	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.32	chr8	+	2623	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	421.709939089978	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2141	False	NA	94	True	AATAAA	-24	NA	13388788	13428448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.34	chr8	+	3056	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-878	-478	5	-262	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCAATCATTTTTAATA	2148	False	NA	NA	False	ATTAAA	-36	NA	13388795	13428180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.35	chr8	+	2367	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	5	-207	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGCAATAGTCTCTTAAA	2148	False	NA	NA	False	TATAAA	-20	NA	13388795	13428235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.36	chr8	+	2122	10	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	6	-277	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	344.059426391559	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAACTCAAAATTTGT	2149	False	NA	NA	False	ATTAAA	-21	NA	13388796	13428165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.37	chr8	+	3094	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	8	-3	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	293.361537587219	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2151	False	NA	91	True	AATAAA	-21	NA	13388798	13428445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13389441_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.38	chr8	+	2678	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	383.986427349833	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAAGCTCTGTGTTTCT	2152	False	NA	87	True	AATAAA	-17	NA	13388799	13428441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.39	chr8	+	2517	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	13	-275	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	274.517427828942	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2156	False	NA	NA	False	ATTAAA	-23	NA	13388803	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.4	chr8	+	2432	10	NIC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	334.85567187619	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2002	False	NA	88	True	AATAAA	-18	NA	13388649	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388807_13389664_13389740_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.40	chr8	+	2797	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	274.517427828942	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2157	False	NA	94	True	AATAAA	-24	NA	13388804	13428448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.41	chr8	+	1258	1	NIC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-15	-30201	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGTGTGAGAGGGTGT	2158	False	NA	NA	False	AATAAA	-28	NA	13388805	13390063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388800_13390100
ES.32509.42	chr8	+	3006	14	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	475.639886652863	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTTTCTGTAAC	2158	False	NA	92	True	AATAAA	-22	NA	13388805	13428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.44	chr8	+	3142	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-15	-275	intron_retention	FALSE	canonical	3	19	junction_2	385.064897396025	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2158	False	NA	NA	False	ATTAAA	-23	NA	13388805	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.45	chr8	+	2555	11	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	391.285369008349	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTTTCTGTAAC	2160	False	NA	92	True	AATAAA	-22	NA	13388807	13428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.46	chr8	+	2533	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-12	-360	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	417.774485617939	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTTGTATTTGTT	2161	False	NA	NA	False	TTTAAA	-12	NA	13388808	13428082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.48	chr8	+	2438	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	331.358355862652	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2162	False	NA	88	True	AATAAA	-18	NA	13388809	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.49	chr8	+	2234	11	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-11	-266	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	378.20085933271	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTCAATCATTTTT	2162	False	NA	NA	False	ATTAAA	-32	NA	13388809	13428176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13415088_13415203_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.5	chr8	+	2525	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	437.466124402793	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2015	False	NA	88	True	AATAAA	-18	NA	13388662	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388807_13389664_13389740_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.50	chr8	+	2890	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	417.774485617939	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2164	False	NA	88	True	AATAAA	-18	NA	13388811	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.51	chr8	+	3083	11	NNC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	-9	-275	intron_retention	FALSE	canonical	3	29	junction_6	307.388695302869	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTCAAAATTTGTCA	2164	False	NA	NA	False	ATTAAA	-23	NA	13388811	13428167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.52	chr8	+	2876	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	431.393768306096	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2167	False	NA	88	True	AATAAA	-18	NA	13388814	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13424213_13424309_13427141
ES.32509.53	chr8	+	2685	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	397.409283848388	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAAGCTCTGTGTTTCT	2170	False	NA	87	True	AATAAA	-17	NA	13388817	13428441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13406350_13406485_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.54	chr8	+	2657	14	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-2	-75	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	459.009043238963	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACTTTAATTGTTTG	2171	False	NA	13	True	AATAAA	-27	NA	13388818	13428367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13421946_13422022_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.55	chr8	+	3215	10	ISM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	64	0	11	0	3prime_fragment	FALSE	canonical	3	161	junction_1	280.650874896635	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2184	False	NA	88	True	AATAAA	-18	NA	13388831	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.58	chr8	+	2702	13	NNC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	423.55567487902	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2355	False	NA	88	True	AATAAA	-18	NA	13389002	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.59	chr8	+	3110	11	NNC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	239	0	intron_retention	FALSE	canonical	3	29	junction_6	307.388695302869	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2412	False	NA	88	True	AATAAA	-18	NA	13389059	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.6	chr8	+	2691	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	371.107314518171	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2020	False	NA	88	True	AATAAA	-18	NA	13388667	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.60	chr8	+	1586	11	NNC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	-214	1343	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	283.983115695282	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTTTTGTTTTGTTT	2464	False	NA	NA	False	NA	NA	NA	13389111	13424326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844
ES.32509.61	chr8	+	2541	11	NIC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	379.716947211999	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2634	False	NA	88	True	AATAAA	-18	NA	13389281	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13389441_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.62	chr8	+	2683	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	453.481245113204	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTTTCTGTAAC	3016	False	NA	92	True	AATAAA	-22	NA	13389663	13428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13404404_13404637_13407042_13407110_13415088_13415193_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.64	chr8	+	2157	11	NNC	ENSMUSG00000038482.12	novel	1700	11	NA	NA	3	-300	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	297.082210844069	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATAGAGAATGTTTTAA	3016	False	NA	NA	False	TATAAA	-10	NA	13389663	13428142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13407042_13407110_13415088_13415203_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.65	chr8	+	2335	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	3	-282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	401.215199567061	1006	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTTTTTTAACTCAAAA	3016	False	NA	NA	False	ATTAAA	-16	NA	13389663	13428160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13389740_13396635_13396803_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.66	chr8	+	2489	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	433.539663698721	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	3016	False	NA	88	True	AATAAA	-18	NA	13389663	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13389740_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.67	chr8	+	2276	9	NIC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	336.642591445289	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	3016	False	NA	88	True	AATAAA	-18	NA	13389663	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13389740_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.69	chr8	+	3774	10	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	15693	-464	-9803	-276	3prime_fragment	FALSE	canonical	3	905	junction_4	64.7103708748871	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAACTCAAAATTTGTC	247	False	NA	NA	False	ATTAAA	-22	NA	13405366	13428166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.7	chr8	+	2662	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	-40	-3	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	2063	False	NA	91	True	AATAAA	-21	NA	13388710	13428445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.70	chr8	+	2692	9	NNC	ENSMUSG00000038482.12	novel	2421	11	NA	NA	-83	-2	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	339.800676868072	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACAAGCTCTGTGTTTC	783	False	NA	86	True	AATAAA	-16	NA	13415086	13428440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13424309_13427141
ES.32509.71	chr8	+	3611	1	NIC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	5370	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1001	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCTGTGTTTCTGTAA	NA	False	NA	91	True	AATAAA	-21	NA	13424834	13428445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13424800_13428400
ES.32509.8	chr8	+	2151	11	NIC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-34	-266	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	322.151656832617	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTCAATCATTTTT	2069	False	NA	NA	False	ATTAAA	-32	NA	13388716	13428176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.32509.9	chr8	+	2586	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	313.356977010761	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2078	False	NA	88	True	AATAAA	-18	NA	13388725	13428442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ES.3251.1	chr10	+	175	1	Intergenic	novelGene_2543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79402447	79402622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79402400_79402600
ES.32510.1	chr8	-	3844	1	Intergenic	novelGene_26514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCACGCTTCGGATGAC	2981	False	NA	NA	False	NA	NA	NA	13393795	13389951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13390000_13393800
ES.32511.1	chr8	-	5235	1	Intergenic	novelGene_26515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTGAG	NA	False	NA	NA	False	NA	NA	NA	13413264	13408029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13408000_13413300
ES.32512.1	chr8	+	3503	1	Intergenic	novelGene_26516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGCAGGCAAACTTGT	4598	False	NA	NA	False	NA	NA	NA	13430084	13433587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13430100_13433600
ES.32513.2	chr8	-	2608	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	-62	2	-62	-2	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTTGGTCACTGT	5698	False	NA	-1	True	AATAAA	-21	NA	13544552	13515375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
ES.32513.3	chr8	-	2578	14	NNC	ENSMUSG00000031451.7	novel	2548	15	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	17.9848720123824	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTTGGTCACTGT	5715	False	NA	-1	True	AATAAA	-21	NA	13544535	13515375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533749_13543845_13544013_13544260
ES.32513.4	chr8	-	2603	15	NNC	ENSMUSG00000031451.7	novel	2548	15	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.3800554236922	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTTGGTCACTGT	5727	False	NA	-1	True	AATAAA	-21	NA	13544523	13515375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524871_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
ES.32513.5	chr8	-	4877	4	NIC	ENSMUSG00000031451.7	novel	2548	15	NA	NA	20596	-3	intron_retention	FALSE	canonical	3	61	junction_1	4.24264068711928	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCTGTGTTGGTCACTG	NA	False	NA	-2	True	AATAAA	-20	NA	13523894	13515376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13515901_13516626_13518365_13520218_13520388_13521448
ES.32514.1	chr8	+	186	1	Intergenic	novelGene_26518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTTGAATTATGTT	NA	False	NA	NA	False	NA	NA	NA	13737799	13737985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13737800_13738000
ES.32515.1	chr8	-	4425	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-18	-3	-18	3	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGAGAGCAATGAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	13727621	13616944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.11	chr8	-	4070	24	NNC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	19	-271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.9330019889269	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTGGAGTGGTTTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	13727584	13617220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627527_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.14	chr8	-	3813	21	NIC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	11	1637	intron_retention	FALSE	canonical	3	48	junction_6	6.62947961758689	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGGATGTCACCTGAG	NA	False	NA	NA	False	ATTAAA	-20	NA	13727592	13625832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.15	chr8	-	2380	21	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	45756	9154	-25739	1368	internal_fragment	FALSE	canonical	3	46	junction_1	6.70279792325563	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGCCTTTCTCAAT	4712	False	NA	NA	False	NA	NA	NA	13681847	13626101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774
ES.32515.16	chr8	-	3211	21	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-31	9529	-31	993	5prime_fragment	FALSE	canonical	3	48	junction_6	6.62947961758689	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCACCGTTTTGTCTC	NA	False	NA	NA	False	CATAAA	-16	NA	13727634	13626476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.17	chr8	-	3116	2	Intergenic	novelGene_26517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGTGTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	13726125	13722925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13724667_13724750
ES.32515.18	chr8	-	5640	3	NNC	ENSMUSG00000031453.17	novel	604	5	NA	NA	-71644	-74832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGTGTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	13799247	13722926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13727855_13735626_13735850_13798758
ES.32515.19	chr8	-	4830	5	Genic_Genomic	ENSMUSG00000031453.17	novel	4404	24	NA	NA	-71647	-76157	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAATTTAAAAT	NA	False	NA	NA	False	GATAAA	-38	NA	13799250	13724251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13724667_13724750_13727855_13735626_13735850_13742690_13743287_13798758
ES.32515.2	chr8	-	4162	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	-26	268	-26	-266	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGTGGTTTGGATTCC	NA	False	NA	0	True	ATTAAA	-20	NA	13727629	13617215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.20	chr8	-	4020	2	Genic_Genomic	ENSMUSG00000109617.2	novel	1603	1	NA	NA	-1769	1708	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCGTCGTCTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	13799247	13794167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13797602_13798661
ES.32515.21	chr8	-	3923	2	Genic_Genomic	ENSMUSG00000109617.2	novel	1603	1	NA	NA	-1771	1706	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTGCGTCGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	13799249	13794169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13797602_13798758
ES.32515.3	chr8	-	4134	2	ISM	ENSMUSG00000031453.17	ENSMUST00000137822.2	3023	10	11217	266	5222	-266	3prime_fragment	FALSE	canonical	3	71	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGTGGTTTGGATTCC	NA	False	NA	0	True	ATTAAA	-20	NA	13622821	13617215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13618767_13620238
ES.32515.4	chr8	-	4027	24	NNC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	22	-266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	17.5489593291161	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGTGGTTTGGATTCC	NA	False	NA	0	True	ATTAAA	-20	NA	13727581	13617215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13618767_13620321_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645338_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.5	chr8	-	5084	23	NIC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	22	-266	intron_retention	FALSE	canonical	3	46	junction_3	7.12535340576345	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGTGGTTTGGATTCC	NA	False	NA	0	True	ATTAAA	-20	NA	13727581	13617215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ES.32515.7	chr8	-	4494	25	NNC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	-71666	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	17.4003112998973	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13799269	13617217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727794_13727855_13798758
ES.32515.8	chr8	-	3645	18	NIC	ENSMUSG00000031453.17	novel	4404	24	NA	NA	-18	-268	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	15.6131875764553	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13727621	13617217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13681774_13681893_13727392
ES.32516.1	chr8	+	178	1	Intergenic	novelGene_26519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACTTGA	9821	False	NA	NA	False	NA	NA	NA	13801969	13802147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_13802000_13802100
ES.32517.1	chr8	+	2336	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	-21	-14	-21	14	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTCTCTGTTACCTTT	NA	False	NA	31	True	AATAAA	-38	NA	13807654	13831952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.10	chr8	+	2249	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	170.996711759396	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTATCTTTTTCATTGT	NA	False	NA	11	True	AATAAA	-13	NA	13807676	13831880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823412_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.11	chr8	+	2295	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	224.965079950716	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807676	13831938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810559_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823410_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.12	chr8	+	5701	14	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	2	-52	intron_retention	FALSE	canonical	3	29	junction_1	181.675893220633	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTCATTGTGTCTTT	NA	False	NA	17	True	AATAAA	-19	NA	13807678	13831886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.13	chr8	+	3451	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	3	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	170.725745793705	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTATCTTTTTCATTGTG	NA	False	NA	12	True	AATAAA	-14	NA	13807679	13831881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13822129_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.14	chr8	+	4036	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	3	-56	intron_retention	FALSE	canonical	3	559	junction_10	60.9229790391113	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807679	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.15	chr8	+	4816	15	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	3	-5	intron_retention	FALSE	canonical	3	601	junction_10	55.7205124725543	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTTTCCAAGCTGGTA	NA	False	NA	12	True	AATAAA	-19	NA	13807679	13831933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813912_13814568_13814703_13816417_13816498_13817537_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.16	chr8	+	4524	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	26	junction_10	174.523911128405	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807681	13831938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13819376_13819503_13821297_13821451_13823340_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.18	chr8	+	2263	19	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	8	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	254.075885427082	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807684	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827553_13829227_13829319_13830369_13830455_13831374
ES.32517.19	chr8	+	2293	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	8	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	171.012231699968	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACTAGAAGTTTCCAA	NA	False	NA	5	True	AATAAA	-12	NA	13807684	13831926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816502_13817528_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.2	chr8	+	4621	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-21	-4	intron_retention	FALSE	canonical	3	559	junction_10	61.2555801029588	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTTCCAAGCTGGTAG	NA	False	NA	13	True	AATAAA	-20	NA	13807654	13831934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.20	chr8	+	9073	12	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	9	-11	intron_retention	FALSE	canonical	3	601	junction_8	51.207889371505	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	False	NA	6	True	AATAAA	-13	NA	13807685	13831927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227
ES.32517.21	chr8	+	3086	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	12	-11	intron_retention	FALSE	canonical	3	559	junction_9	61.6734089782623	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	False	NA	6	True	AATAAA	-13	NA	13807688	13831927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.22	chr8	+	5881	14	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	12	-4	intron_retention	FALSE	canonical	3	601	junction_9	53.2576632816804	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTTCCAAGCTGGTAG	NA	False	NA	13	True	AATAAA	-20	NA	13807688	13831934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.23	chr8	+	2272	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	168.674231997043	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTAGAAGTTTCCAAGC	NA	False	NA	7	True	AATAAA	-14	NA	13807688	13831928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831377
ES.32517.24	chr8	+	2227	17	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	12	-53	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	170.563404632999	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTCATTGTGTCTT	NA	False	NA	16	True	AATAAA	-18	NA	13807688	13831885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13809092_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.25	chr8	+	3789	17	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	12	-54	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	223.749711941155	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTCATTGTGTCT	NA	False	NA	15	True	AATAAA	-17	NA	13807688	13831884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13819687_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.26	chr8	+	3025	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	14	-3	intron_retention	FALSE	canonical	3	559	junction_10	62.062688821465	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807690	13831935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.27	chr8	+	3563	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	16	-1278	15	1278	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATATTTTTTTTATAT	NA	False	NA	NA	False	AATAAA	-13	NA	13807691	13833216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.28	chr8	+	3889	15	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	15	-56	intron_retention	FALSE	canonical	3	29	junction_1	176.919862522844	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807691	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.29	chr8	+	12026	10	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	16	0	intron_retention	FALSE	canonical	3	614	junction_9	46.2203525262878	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807692	13831938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13809238_13810529_13810569_13810976_13811118_13812850_13813912_13814568_13814703_13816417_13816498_13817537_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.3	chr8	+	3925	6	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-21	-741	intron_retention	FALSE	canonical	3	684	junction_5	33.1324614238061	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGCTTTCTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	13807654	13815756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813912_13814568
ES.32517.30	chr8	+	3986	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	18	-11	intron_retention	FALSE	canonical	3	601	junction_11	55.3551764115657	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	False	NA	6	True	AATAAA	-13	NA	13807694	13831927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.31	chr8	+	2195	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	18	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.984387882795	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807694	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13809028_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.32	chr8	+	2270	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	170.996711759396	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTTTCCAAGCTGGTA	NA	False	NA	12	True	AATAAA	-19	NA	13807694	13831933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823398_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.33	chr8	+	5783	15	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	18	-9	intron_retention	FALSE	canonical	3	601	junction_10	56.0061949926168	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAGAAGTTTCCAAGCT	NA	False	NA	8	True	AATAAA	-15	NA	13807694	13831929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.34	chr8	+	2207	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	19	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	170.883497009433	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807695	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829301_13831371
ES.32517.37	chr8	+	3834	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	20	-56	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	168.610215717467	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTATCTTTTTCATTGTGT	NA	False	NA	13	True	AATAAA	-15	NA	13807696	13831882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13819687_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.38	chr8	+	8034	13	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	21	-3	intron_retention	FALSE	canonical	3	29	junction_1	189.093451323237	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807697	13831935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.39	chr8	+	7317	15	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	22	14	intron_retention	FALSE	non_canonical	0	0	junction_12	183.933550556738	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTCTCTGTTACCTTT	NA	False	NA	31	True	AATAAA	-38	NA	13807698	13831952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13821451_13823340_13823405_13825707_13826558_13826744_13827608_13829227_13829319_13831371
ES.32517.40	chr8	+	4110	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	23	-52	intron_retention	FALSE	canonical	3	559	junction_9	62.56907294254	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTCATTGTGTCTTT	NA	False	NA	17	True	AATAAA	-19	NA	13807699	13831886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.41	chr8	+	1408	13	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	28	6907	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	191.216863505521	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTGTGTACTATCTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	13807704	13823404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13809092_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340
ES.32517.44	chr8	+	3499	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	32	1286	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_16	161.343987656625	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTATATATTTTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	13807708	13833224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827553_13829227_13829319_13831371
ES.32517.45	chr8	+	6856	15	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	34	0	intron_retention	FALSE	canonical	3	559	junction_10	62.4204391564958	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807710	13831938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227
ES.32517.46	chr8	+	2174	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	41	-11	combination_of_known_splicesites	FALSE	canonical	3	26	junction_10	169.031755522446	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	False	NA	6	True	AATAAA	-13	NA	13807717	13831927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.47	chr8	+	3204	17	ISM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	237	3	236	-3	3prime_fragment	FALSE	canonical	3	559	junction_9	61.0961076910796	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807912	13831935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.48	chr8	+	4956	3	ISM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	15927	58	-5399	-58	intron_retention	FALSE	canonical	3	728	junction_1	13.5	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTATCTTTTTCATTGT	NA	False	NA	11	True	AATAAA	-13	NA	13823602	13831880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13825770_13827471_13827608_13829227
ES.32517.49	chr8	+	1843	1	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-4142	-5236	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAACCCAAAA	NA	False	NA	NA	False	NA	NA	NA	13824859	13826702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13824900_13826700
ES.32517.5	chr8	+	2254	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_16	161.343987656625	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTCCAAGCTGGTAGA	NA	False	NA	14	True	AATAAA	-21	NA	13807664	13831935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827553_13829227_13829319_13831371
ES.32517.7	chr8	+	2169	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-5	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	180.332828095411	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	False	NA	6	True	AATAAA	-13	NA	13807670	13831927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13827471_13827608_13829227_13829319_13831371
ES.32517.8	chr8	+	2246	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	166.691319791254	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCCAAGCTGGTAGAG	NA	False	NA	15	True	AATAAA	-22	NA	13807673	13831936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32517.9	chr8	+	2986	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-2	intron_retention	FALSE	canonical	3	29	junction_1	172.108828619827	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCCAAGCTGGTAGAG	NA	False	NA	15	True	AATAAA	-22	NA	13807675	13831936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ES.32518.1	chr8	+	1576	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	13	468	-7	-468	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTTTGTTTTTGTTTT	NA	False	NA	14	True	AATAAA	-27	NA	13835627	13848725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ES.32518.11	chr8	+	1935	8	ISM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	364	20	334	-20	3prime_fragment	FALSE	canonical	3	271	junction_5	39.9571198733271	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGTGCTAAAGG	NA	False	NA	NA	False	NA	NA	NA	13835978	13849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ES.32518.12	chr8	+	2949	3	NIC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	7827	-470	intron_retention	FALSE	canonical	3	317	junction_1	43.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTTTTGTTTTTGTT	NA	False	NA	12	True	AATAAA	-25	NA	13843471	13848723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13845740_13846458_13846593_13848176
ES.32518.2	chr8	+	1681	10	NNC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	-5	-476	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	132.603092901009	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCAGGTTTTTTGTT	NA	False	NA	6	True	AATAAA	-19	NA	13835629	13848717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13847804_13847920_13848176
ES.32518.4	chr8	+	520	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	1	610	1	-610	multi-exon	FALSE	canonical	3	312	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGACTGCATCCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	13835645	13836427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13835885_13836146
ES.32518.5	chr8	+	1812	8	NIC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	1	-476	intron_retention	FALSE	canonical	3	271	junction_5	39.9571198733271	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCAGGTTTTTTGTT	NA	False	NA	6	True	AATAAA	-19	NA	13835645	13848717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ES.32518.6	chr8	+	2004	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	33	20	3	-20	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGTGCTAAAGG	NA	False	NA	NA	False	NA	NA	NA	13835647	13849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ES.32518.7	chr8	+	827	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	3	301	3	-301	multi-exon	FALSE	canonical	3	312	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATGAATAATTA	NA	False	NA	NA	False	TTTAAA	-10	NA	13835647	13836736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13835885_13836146
ES.32518.8	chr8	+	2653	8	NIC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	8	-477	intron_retention	FALSE	canonical	3	271	junction_5	41.1944121433567	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAATCAGGTTTTTTGT	NA	False	NA	5	True	AATAAA	-18	NA	13835652	13848716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13835885_13836146_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ES.32518.9	chr8	+	5873	7	NIC	ENSMUSG00000038398.9	novel	2057	9	NA	NA	18	-476	intron_retention	FALSE	canonical	3	271	junction_4	44.4850162039609	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCAGGTTTTTTGTT	NA	False	NA	6	True	AATAAA	-19	NA	13835662	13848717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13835885_13836146_13837472_13841881_13841981_13842099_13845496_13845583_13845740_13846458_13846593_13848176
ES.32519.1	chr8	+	3990	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	26	-3	26	3	multi-exon	FALSE	canonical	3	209	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGTACTTAATTTTTA	NA	False	NA	20	True	ATTAAA	-22	NA	13919666	13931642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919812_13927797
ES.32519.10	chr8	+	2883	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	22	1072	22	-1072	multi-exon	FALSE	canonical	2	6	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGAGTCTTTGTCCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	13919725	13930567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919839_13927797
ES.32519.11	chr8	+	3292	1	FSM	ENSMUSG00000065817.3	ENSMUST00000083883.3	130	1	-2227	-935	-2227	935	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13923869	13927161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13923900_13927200
ES.32519.2	chr8	+	2914	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	27	1072	27	-1072	multi-exon	FALSE	canonical	3	209	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGAGTCTTTGTCCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	13919667	13930567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919812_13927797
ES.32519.3	chr8	+	5204	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	29	-1220	29	1220	multi-exon	FALSE	canonical	3	209	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCAGCTGTTGTGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	13919669	13932859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919812_13927797
ES.32519.4	chr8	+	4093	3	NNC	ENSMUSG00000047710.9	novel	4013	2	NA	NA	-24	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTCATGTGTACTTA	NA	False	NA	13	True	ATTAAA	-15	NA	13919679	13931635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13919812_13921193_13921317_13927797
ES.32519.5	chr8	+	3842	3	NNC	ENSMUSG00000047710.9	novel	4013	2	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.5	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCATGTGTACTTAAT	NA	False	NA	15	True	ATTAAA	-17	NA	13919688	13931637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13919812_13927797_13931203_13931323
ES.32519.6	chr8	+	3027	1	NIC	ENSMUSG00000047710.9	novel	4013	2	NA	NA	-15	-8924	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATAGTAAGATAGCTG	NA	False	NA	NA	False	NA	NA	NA	13919688	13922715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13919700_13922700
ES.32519.7	chr8	+	2791	2	NNC	ENSMUSG00000047710.9	novel	3977	2	NA	NA	-12	-8970	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	13919691	13922669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13920739_13920925
ES.32519.8	chr8	+	3985	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	-12	4	-12	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTCATGTGTACTTA	NA	False	NA	13	True	ATTAAA	-15	NA	13919691	13931635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919839_13927797
ES.32519.9	chr8	+	2781	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	59	1173	-4	-1173	multi-exon	FALSE	canonical	3	209	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGGATATAACTCATTT	NA	False	NA	NA	False	AATACA	-17	NA	13919699	13930466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13919812_13927797
ES.3252.1	chr10	-	217	1	Intergenic	novelGene_2544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTTCCTTTTGAAG	NA	False	NA	NA	False	ATTAAA	-29	NA	79404770	79404553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79404600_79404800
ES.32520.10	chr8	-	5024	2	FSM	ENSMUSG00000031458.9	ENSMUST00000210249.2	1958	2	-3069	3	-3	-3	multi-exon	FALSE	canonical	3	657	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTAGTATGCTCTGTCT	NA	False	NA	-11	True	AATAAA	-13	NA	13940284	13934796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13935202_13935665
ES.32520.11	chr8	-	1288	3	NIC	ENSMUSG00000031458.9	novel	793	4	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_1	324	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTAGTATGCTCTGTC	NA	False	NA	-12	True	AATAAA	-12	NA	13940303	13934797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13935882_13937759_13937827_13940166
ES.32520.12	chr8	-	3121	3	ISM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	8	4	8	-4	intron_retention	FALSE	canonical	0	0	junction_2	328.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTAGTATGCTCTGTC	NA	False	NA	-12	True	AATAAA	-12	NA	13940260	13934797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13935202_13935665_13935882_13937759
ES.32520.13	chr8	-	3119	2	FSM	ENSMUSG00000031458.9	ENSMUST00000210749.2	482	2	21	-2658	8	-8	multi-exon	FALSE	canonical	3	648	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCACCTAGTATGCTC	NA	False	NA	-16	True	AATAAA	-8	NA	13940260	13934801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13937827_13940166
ES.32520.15	chr8	-	544	3	ISM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-5	718	-5	0	5prime_fragment	FALSE	canonical	0	0	junction_1	324	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCACAACATGTCAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	13940273	13935511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13935882_13937759_13937827_13940166
ES.32520.2	chr8	-	1143	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-27	-323	-14	323	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTACACTGTTGCTG	NA	False	NA	NA	False	TTTAAA	-24	NA	13940295	13934470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ES.32520.3	chr8	-	3455	3	ISM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-2	-320	-2	320	intron_retention	FALSE	canonical	0	0	junction_2	328.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGAGTACACTGTTG	NA	False	NA	NA	False	TTTAAA	-21	NA	13940270	13934473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_13935202_13935665_13935882_13937759
ES.32520.4	chr8	-	1650	1	Genic_Genomic	ENSMUSG00000031458.9	novel	NA	NA	NA	NA	1091	319	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATATGAGTACACTGTT	NA	False	NA	NA	False	TTTAAA	-20	NA	13936124	13934474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13934500_13936100
ES.32520.5	chr8	-	1306	5	NNC	ENSMUSG00000031458.9	novel	793	4	NA	NA	19	318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	325.51728064728	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATATGAGTACACTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	13940249	13934475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_13935202_13935665_13935882_13936694_13936909_13937759_13937827_13940166
ES.32520.6	chr8	-	838	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	-39	-6	-26	6	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGTCTGCGTCTCTT	NA	False	NA	-2	True	AATAAA	-22	NA	13940307	13934787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ES.32520.8	chr8	-	5050	1	Genic_Genomic	ENSMUSG00000031458.9	novel	NA	NA	NA	NA	126	5	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTCTGTCTGCGTCTCT	NA	False	NA	-3	True	AATAAA	-21	NA	13939838	13934788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13934800_13939800
ES.32520.9	chr8	-	2673	3	NIC	ENSMUSG00000031458.9	novel	793	4	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	648	junction_2	4.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGTATGCTCTGTCTGC	NA	False	NA	-9	True	AATAAA	-15	NA	13940271	13934794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_13935202_13935665_13937827_13940166
ES.32521.1	chr8	+	2076	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-50	-14	-50	14	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATAACTGTGCTTGCTA	NA	False	NA	28	True	AATAAA	-34	NA	13957752	13990536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ES.32521.10	chr8	+	1995	10	NNC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.3263445219563	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957809	13990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979432_13981181_13981365_13985145_13985290_13989562
ES.32521.11	chr8	+	2059	11	NNC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	45.5039558719899	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957809	13990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971963_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13988921_13988949_13989562
ES.32521.12	chr8	+	5782	9	NIC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	9	-1	intron_retention	FALSE	canonical	3	86	junction_8	11.9058808997907	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAATTTTTCTGCAACA	NA	False	NA	12	True	AATAAA	-18	NA	13957811	13990520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13985290_13989562
ES.32521.13	chr8	+	2111	10	NNC	ENSMUSG00000038365.9	novel	737	4	NA	NA	6317	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2262528363278	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAATTTTTCTGCAACA	NA	False	NA	12	True	AATAAA	-18	NA	13964119	13990520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13964282_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ES.32521.14	chr8	+	8243	1	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	2984	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAATTTTTCTGCAACA	NA	False	NA	12	True	AATAAA	-18	NA	13982277	13990520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13982300_13990500
ES.32521.3	chr8	+	2068	11	NIC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	39.2779836549688	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957772	13990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13988921_13988949_13989562
ES.32521.4	chr8	+	6950	8	NIC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	-29	-10	intron_retention	FALSE	canonical	3	86	junction_7	11.2757641489549	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGTTATATAATTTT	NA	False	NA	3	True	AATAAA	-9	NA	13957773	13990511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ES.32521.6	chr8	+	2049	10	NNC	ENSMUSG00000038365.9	novel	2035	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	40.8831517714257	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957789	13990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971963_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13989562
ES.32521.7	chr8	+	2026	10	NNC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.8911916480255	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGTTATATAATTTT	NA	False	NA	3	True	AATAAA	-9	NA	13957793	13990511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_13957864_13964943_13965085_13970959_13971049_13971884_13971963_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ES.32521.8	chr8	+	6293	9	ISM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-9	1	-9	0	intron_retention	FALSE	canonical	3	91	junction_7	9.45961812125627	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957793	13990521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145
ES.32521.9	chr8	+	1417	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	-2	597	-2	69	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATGGATCAAAAAGAGT	NA	False	NA	NA	False	TATAAA	-23	NA	13957800	13989925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ES.32522.1	chr8	-	311	1	Intergenic	novelGene_26520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13960957	13960646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13960600_13961000
ES.32523.1	chr8	-	171	1	Intergenic	novelGene_26521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAGAAAGAACAC	NA	False	NA	NA	False	NA	NA	NA	13963732	13963561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13963600_13963700
ES.32524.1	chr8	-	180	1	Intergenic	novelGene_26522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTTCCCAGGCTAA	NA	False	NA	NA	False	NA	NA	NA	13998331	13998151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_13998200_13998300
ES.32525.1	chr8	+	3610	1	Intergenic	novelGene_26523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGATG	NA	False	NA	NA	False	AATACA	-25	NA	14012636	14016246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14012600_14016200
ES.32526.1	chr8	+	178	1	Intergenic	novelGene_26524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	2917	False	NA	NA	False	NA	NA	NA	14020335	14020513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14020300_14020500
ES.32526.2	chr8	+	338	1	Intergenic	novelGene_26525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGGAAAAAACAAAACAAAAA	2918	False	NA	NA	False	NA	NA	NA	14020336	14020674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14020300_14020700
ES.32527.1	chr8	+	1878	1	Antisense	novelGene_ENSMUSG00000050052.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATTCTTTGTTTGTTTG	7090	False	NA	NA	False	AATAAA	-18	NA	14024508	14026386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_14024500_14026400
ES.32528.1	chr8	-	3007	1	Genic_Genomic	ENSMUSG00000050052.13	novel	NA	NA	NA	NA	928	2555	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTCTACAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	14002459	13999452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_13999500_14002500
ES.32528.10	chr8	-	2477	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	23	-3	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4548	False	NA	-7	True	ATTAAA	-15	NA	14025009	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
ES.32528.11	chr8	-	2436	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-125	-3	intron_retention	FALSE	canonical	0	0	junction_3	134.032334407286	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4655	False	NA	-7	True	ATTAAA	-15	NA	14024902	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024878
ES.32528.12	chr8	-	2465	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	10	-2102	10	-3	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4535	False	NA	-7	True	ATTAAA	-15	NA	14025022	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
ES.32528.13	chr8	-	2498	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	1	-3	intron_retention	FALSE	canonical	3	28	junction_3	125.867655363348	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4526	False	NA	-7	True	ATTAAA	-15	NA	14025031	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024516_14024730_14024969
ES.32528.15	chr8	-	2432	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-9	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	135.7063823931	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4516	False	NA	-7	True	ATTAAA	-15	NA	14025041	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024536_14024730_14025025
ES.32528.16	chr8	-	2495	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-125	-4	intron_retention	FALSE	canonical	0	0	junction_3	138.372283673028	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCTTTAGTGTGTATA	4655	False	NA	-8	True	ATTAAA	-14	NA	14024902	14002011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024480_14024730_14024878
ES.32528.17	chr8	-	2562	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	142	-4	intron_retention	FALSE	canonical	1	2	junction_2	147	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCTTTAGTGTGTATA	5006	False	NA	-8	True	ATTAAA	-14	NA	14024551	14002011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024211
ES.32528.18	chr8	-	1973	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	58	-350	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGGAGATTTTGATT	4583	False	NA	0	True	AATAAA	-26	NA	14024974	14002479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
ES.32528.2	chr8	-	2896	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-23	-410	-23	410	multi-exon	FALSE	canonical	3	271	junction_2	12.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGCGTCTGTCTCCTT	4757	False	NA	NA	False	AAGAAA	-15	NA	14024800	14001597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14004136_14005719_14005818_14024540
ES.32528.20	chr8	-	1768	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	-16	-359	intron_retention	FALSE	canonical	0	0	junction_2	148	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGTGAAATTATGGAG	4509	False	NA	-9	True	AATAAA	-17	NA	14025048	14002488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14025025
ES.32528.21	chr8	-	2159	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	101	-360	intron_retention	FALSE	canonical	3	30	junction_2	133	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTTGTGAAATTATGGA	4626	False	NA	-10	True	AATAAA	-16	NA	14024931	14002489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024516
ES.32528.22	chr8	-	1852	2	NNC	ENSMUSG00000050052.13	novel	323	2	NA	NA	20	-361	intron_retention	FALSE	canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTTGTGAAATTATGG	4834	False	NA	-11	True	AATAAA	-15	NA	14024723	14002490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14024516
ES.32528.23	chr8	-	1632	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	-174	1005	81	743	multi-exon	FALSE	canonical	3	271	junction_2	12.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTCTCAGATGCTTAGT	4606	False	NA	NA	False	GATAAA	-19	NA	14024951	14003012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14004136_14005719_14005818_14024540
ES.32528.24	chr8	-	1371	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	-9	623	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	133	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATGGAAGAAACACTAG	4771	False	NA	NA	False	AATAAA	-17	NA	14024786	14003132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024516
ES.32528.26	chr8	-	1339	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	33	617	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	123.22427610752	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTTAAAGATGGAAGAAA	4558	False	NA	NA	False	AATAAA	-11	NA	14024999	14003138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
ES.32528.3	chr8	-	3655	1	Genic_Genomic	ENSMUSG00000050052.13	novel	NA	NA	NA	NA	-1907	368	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	14005294	14001639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_14001600_14005300
ES.32528.5	chr8	-	2477	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	-32	-1	intron_retention	TRUE	canonical	3	17	junction_3	128.567319158313	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4493	False	NA	-5	True	ATTAAA	-17	NA	14025064	14002008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14024516_14024730_14025025
ES.32528.6	chr8	-	2585	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	62	-1	intron_retention	FALSE	canonical	0	0	junction_2	134.442883370184	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4587	False	NA	-5	True	ATTAAA	-17	NA	14024970	14002008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005939_14024516_14024730_14024944
ES.32528.7	chr8	-	2249	3	NNC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_2	148	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGTGTATATTT	4508	False	NA	-5	True	ATTAAA	-17	NA	14025049	14002008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14004136_14005719_14005818_14025025
ES.32528.8	chr8	-	2266	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	12	-1955	12	-3	multi-exon	FALSE	canonical	2	12	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	4876	False	NA	-7	True	ATTAAA	-15	NA	14024681	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14004136_14024540
ES.32528.9	chr8	-	2672	1	NIC	ENSMUSG00000050052.13	novel	2463	3	NA	NA	-1295	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTTAGTGTGTATAT	NA	False	NA	-7	True	ATTAAA	-15	NA	14004682	14002010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_14002000_14004700
ES.32529.1	chr8	-	1905	1	Intergenic	novelGene_26526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCAAAGAAAAAACGTTTA	NA	False	NA	NA	False	NA	NA	NA	14043527	14041622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14041600_14043500
ES.3253.1	chr10	-	221	1	Intergenic	novelGene_2545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAATGAAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	79414639	79414418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79414400_79414600
ES.32530.1	chr8	+	177	1	Intergenic	novelGene_26528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAGTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	14057869	14058046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14057900_14058000
ES.32531.1	chr8	-	6388	1	Intergenic	novelGene_26527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCCCCATTCATGTAGA	NA	False	NA	NA	False	NA	NA	NA	14063857	14057469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14057500_14063900
ES.32532.1	chr8	-	159	1	Intergenic	novelGene_26529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	14065920	14065761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14065800_14065900
ES.32533.1	chr8	+	178	1	Intergenic	novelGene_26530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	1903	False	NA	NA	False	NA	NA	NA	14092388	14092566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14092400_14092600
ES.32534.1	chr8	-	3243	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-23	-1663	-23	1663	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTGGTTTTTTTTT	NA	False	NA	-11	True	NA	NA	NA	14140324	14075897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ES.32534.10	chr8	-	1492	2	NNC	ENSMUSG00000051978.10	novel	422	5	NA	NA	40294	-14595	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTGCTAGAACAGTAT	NA	False	NA	NA	False	NA	NA	NA	14099985	14098291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14099342_14099543
ES.32534.11	chr8	-	4870	1	NIC	ENSMUSG00000051978.10	novel	422	5	NA	NA	37086	-14627	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14103193	14098323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_14098300_14103200
ES.32534.12	chr8	-	190	1	Intergenic	novelGene_26531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAATCCAGCAAT	NA	False	NA	NA	False	NA	NA	NA	14100690	14100500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14100500_14100700
ES.32534.13	chr8	-	1943	4	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	8	-25227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.925763528633	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACATAGCGTTTGGTTTC	NA	False	NA	NA	False	NA	NA	NA	14140271	14108923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14110490_14114204_14114340_14128769_14128917_14140176
ES.32534.14	chr8	-	5635	3	ISM	ENSMUSG00000051978.10	ENSMUST00000211242.2	422	5	-36	25230	-14	-25230	5prime_fragment	FALSE	canonical	3	204	junction_2	54.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGACATAGCGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	14140315	14108926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_14114340_14128769_14128917_14140240
ES.32534.2	chr8	-	3279	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	4	1662	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTTTGGTTTTTTTT	NA	False	NA	-12	True	NA	NA	NA	14140297	14075898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
ES.32534.3	chr8	-	1602	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	-25	-20	-25	20	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCGCCTTGTGTGTGA	NA	False	NA	14	True	AATAAA	-38	NA	14140326	14077540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ES.32534.4	chr8	-	1645	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTGTGATAAGATTAT	NA	False	NA	-4	True	AATAAA	-20	NA	14140323	14077558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
ES.32534.5	chr8	-	1604	4	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	49156	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.879174158633	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	4542	False	NA	-6	True	AATAAA	-18	NA	14091123	14077560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14090733
ES.32534.6	chr8	-	4192	5	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	96	junction_4	88.2535410054464	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATATTTGTGATAAGA	NA	False	NA	-8	True	AATAAA	-16	NA	14140323	14077562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14078154_14080592_14083765_14114204_14114340_14128769_14128917_14140176
ES.32534.7	chr8	-	1761	7	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.696106377437	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATATTTGTGATAAGA	NA	False	NA	-8	True	AATAAA	-16	NA	14140297	14077562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14078154_14079516_14079663_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
ES.32534.8	chr8	-	1586	4	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	5	4956	5	1180	5prime_fragment	FALSE	canonical	3	204	junction_3	44.5745318414999	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTCTTTTTCAT	NA	False	NA	NA	False	AGTAAA	-19	NA	14140296	14082516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_14083765_14114204_14114340_14128769_14128917_14140240
ES.32534.9	chr8	-	3709	4	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	7	-10601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.925763528633	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAACAGGATCATCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	14140294	14094297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_14097607_14114204_14114340_14128769_14128917_14140176
ES.32535.1	chr8	+	1032	1	FSM	ENSMUSG00000074461.3	ENSMUST00000098916.3	2130	1	2	1096	2	-1096	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATAGGTCTCTGCTGCT	4309	False	NA	NA	False	NA	NA	NA	14140462	14141494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14140500_14141500
ES.32535.2	chr8	+	865	2	Genic_Genomic	ENSMUSG00000074461.3	novel	2130	1	NA	NA	26	-1096	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATAGGTCTCTGCTGCT	4333	False	NA	NA	False	NA	NA	NA	14140486	14141494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_14140659_14140801
ES.32535.3	chr8	+	1960	2	Genic_Genomic	ENSMUSG00000074461.3	novel	2130	1	NA	NA	26	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAAGACTTGCCTTGGTC	4333	False	NA	NA	False	NA	NA	NA	14140486	14142589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_14140659_14140801
ES.32536.1	chr8	+	3008	3	NNC	ENSMUSG00000047495.16	novel	4503	16	NA	NA	-4	-298784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTCTCAGCCAGGGT	9707	False	NA	NA	False	ATTAAA	-14	NA	14145860	14258926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14146142_14229582_14229682_14256298
ES.32536.2	chr8	+	199	1	Intergenic	novelGene_26532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTCAGATAGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	14212302	14212501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14212300_14212500
ES.32537.1	chr8	+	3293	2	Antisense	novelGene_ENSMUSG00000088311.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGGCTGGGTCCTG	NA	False	NA	NA	False	AATAGA	-15	NA	14322609	14326717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_14325272_14326086
ES.32538.1	chr8	+	174	1	Intergenic	novelGene_26533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGCTGTCTT	5233	False	NA	NA	False	NA	NA	NA	14359688	14359862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14359700_14359900
ES.32539.1	chr8	+	180	1	Intergenic	novelGene_26534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAAAAAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	14396173	14396353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14396200_14396400
ES.3254.1	chr10	-	2903	2	FSM	ENSMUSG00000045912.10	ENSMUST00000059699.9	6729	2	-38	3864	-13	-4	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGGGGGTGCAGGCCTG	NA	False	NA	NA	False	AGTAAA	-12	NA	79449872	79446551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79449173_79449590
ES.32540.1	chr8	+	3441	10	ISM	ENSMUSG00000047495.16	ENSMUST00000141214.8	2949	11	149028	-680	149028	680	3prime_fragment	FALSE	canonical	0	0	junction_1	0.87488976377909	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGATTTAGTCAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	14581023	14882438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_14581062_14745114_14745181_14776928_14777999_14793249_14793462_14823233_14823382_14828195_14828416_14872342_14872696_14873573_14873616_14879868_14879955_14881232
ES.32541.1	chr8	-	304	1	Intergenic	novelGene_26535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	14906412	14906108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14906100_14906400
ES.32542.1	chr8	-	2356	1	Intergenic	novelGene_26536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	14929240	14926884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14926900_14929200
ES.32542.2	chr8	-	185	1	Intergenic	novelGene_26537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTAAGAGTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	14929247	14929062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_14929100_14929200
ES.32543.1	chr8	+	190	1	Intergenic	novelGene_26538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGGACAAGCCAAAT	NA	False	NA	NA	False	NA	NA	NA	14934739	14934929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_14934700_14934900
ES.32544.1	chr8	+	2756	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-442	2879	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGGTATGATGCCTA	NA	False	NA	9	True	TATAAA	-17	NA	14938561	14947938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
ES.32544.10	chr8	+	5528	29	NNC	ENSMUSG00000071176.11	novel	4219	19	NA	NA	-5241	2	intron_retention	FALSE	canonical	0	0	junction_1	10.0480351414633	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGTATTTCAAGTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14956421	15051076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14956532_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.11	chr8	+	5489	29	NNC	ENSMUSG00000071176.11	novel	4219	19	NA	NA	-5169	2	intron_retention	FALSE	canonical	0	0	junction_1	10.0480351414633	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGTATTTCAAGTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14956493	15051076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14956565_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.12	chr8	+	5419	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-85	2	-10	1	multi-exon	FALSE	canonical	3	16	junction_8	7.20558387346064	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAAGTTGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	14961652	15051083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.13	chr8	+	5517	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	9	2	9	1	multi-exon	FALSE	canonical	3	14	junction_9	8.00541908296359	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAAGTTGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	14961671	15051083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.14	chr8	+	4126	27	NNC	ENSMUSG00000071176.11	novel	5528	29	NA	NA	14	-4585	intron_retention	FALSE	canonical	0	0	junction_26	10.3895287521768	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATAAGGTAGCATTCCCT	NA	False	NA	NA	False	NA	NA	NA	14961676	15036539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15035862
ES.32544.15	chr8	+	4749	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	-55	642	20	-631	multi-exon	FALSE	canonical	3	16	junction_8	7.20558387346064	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCAATGTACTCTCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	14961682	15050443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.16	chr8	+	4855	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	35	638	-19	-627	multi-exon	FALSE	canonical	3	14	junction_9	8.00541908296359	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATGTACTCTCTGTAGC	NA	False	NA	NA	False	ATTAAA	-21	NA	14961697	15050447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.17	chr8	+	4582	27	NIC	ENSMUSG00000071176.11	novel	5336	28	NA	NA	-16	-637	intron_retention	FALSE	canonical	0	0	junction_24	9.91979671484781	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTTTAGTCAATGTAC	NA	False	NA	NA	False	ATTAAA	-11	NA	14961700	15050437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15041059_15041235_15047541_15047665_15049318
ES.32544.18	chr8	+	5527	29	NNC	ENSMUSG00000071176.11	novel	5528	29	NA	NA	-6	4	intron_retention	FALSE	canonical	0	0	junction_9	11.3101002359368	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTATTTCAAGTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	14961710	15051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14995972_14996144_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.19	chr8	+	5585	30	NNC	ENSMUSG00000071176.11	novel	5528	29	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_25	11.6876714825879	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTATTTCAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	14961711	15051074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15032318_15032436_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.2	chr8	+	6137	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	720	0	-173	0	multi-exon	FALSE	canonical	3	162	junction_1	24.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGCCATATATATGT	NA	False	NA	6	True	NA	NA	NA	14938830	14951720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14939119_14944571_14945231_14946530
ES.32544.20	chr8	+	1499	5	ISM	ENSMUSG00000071176.11	ENSMUST00000161162.8	1912	16	5	28000	5	4911	5prime_fragment	FALSE	canonical	3	23	junction_1	10.6389614154766	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTCCCAATGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	14961728	14983202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356
ES.32544.21	chr8	+	1603	10	ISM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	69	55332	-6	-15449	5prime_fragment	FALSE	canonical	3	14	junction_9	11.9814671704076	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTTCAACCAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	14961731	14995753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279
ES.32544.22	chr8	+	2587	17	NNC	ENSMUSG00000071176.11	novel	4219	19	NA	NA	12834	1604	intron_retention	FALSE	canonical	0	0	junction_1	12.3324711128792	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATCGTTAGTATTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	14974571	15012806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14974912_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517
ES.32544.23	chr8	+	4789	28	ISM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	13386	639	13311	-628	3prime_fragment	FALSE	canonical	3	14	junction_8	7.84258712667613	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAATGTACTCTCTGTAG	77	False	NA	NA	False	ATTAAA	-20	NA	14975048	15050446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.24	chr8	+	2714	1	NIC	ENSMUSG00000071176.11	novel	5528	29	NA	NA	-4977	14746	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAATCACTTCTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	14990323	14993037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14990300_14993000
ES.32544.3	chr8	+	2352	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	723	3782	-170	2879	multi-exon	FALSE	canonical	3	162	junction_1	24.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGGTATGATGCCTA	NA	False	NA	9	True	TATAAA	-17	NA	14938833	14947938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_14939119_14944571_14945231_14946530
ES.32544.4	chr8	+	5566	28	Fusion	ENSMUSG00000026317.8_ENSMUSG00000071176.11	novel	4219	19	NA	NA	-150	2	intron_retention	TRUE	canonical	0	0	junction_1	9.55813918560292	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGTATTTCAAGTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	14938853	15051076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_14939119_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.5	chr8	+	1795	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-147	2213	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGTGATTTGCTGA	NA	False	NA	9	True	NA	NA	NA	14938856	14947272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
ES.32544.6	chr8	+	6243	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGCCATATATATGT	NA	False	NA	6	True	NA	NA	NA	14938856	14951720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
ES.32544.7	chr8	+	2505	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	108	2879	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.9939611544632	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAGGTATGATGCCTA	NA	False	NA	9	True	TATAAA	-17	NA	14939111	14947938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_14939418_14940491_14940624_14944571_14945231_14946530
ES.32544.8	chr8	+	5987	28	NNC	ENSMUSG00000071176.11	novel	4219	19	NA	NA	-5815	4	intron_retention	FALSE	canonical	0	0	junction_1	9.55813918560292	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTATTTCAAGTTGCTT	NA	False	NA	NA	False	AATAAA	-19	NA	14955847	15051078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14956532_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32544.9	chr8	+	4794	28	NNC	ENSMUSG00000071176.11	novel	4219	19	NA	NA	-5255	-629	intron_retention	FALSE	canonical	0	0	junction_1	9.55813918560292	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCAATGTACTCTCTGTA	NA	False	NA	NA	False	ATTAAA	-19	NA	14956407	15050445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_14956532_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ES.32545.1	chr8	+	5985	1	ISM	ENSMUSG00000055675.7	ENSMUST00000069399.7	6973	2	16321	3	56	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTGCTGTGTTCTTTT	NA	False	NA	11	True	AATAAA	-27	NA	15077345	15083330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_15077300_15083300
ES.32546.1	chr8	+	5083	37	NNC	ENSMUSG00000031461.5	novel	3973	6	NA	NA	-9	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.643102050155013	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATCTTGTTGTGATT	NA	False	NA	NA	False	AATAAA	-7	NA	15110180	15183413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_15110404_15113842_15113961_15115693_15115850_15119373_15119513_15119647_15119806_15120671_15120765_15127818_15127908_15127996_15128048_15130858_15131024_15131261_15131424_15133229_15133372_15134460_15134661_15135260_15135315_15148341_15148470_15149174_15149359_15152482_15152658_15154066_15154189_15156279_15156468_15158362_15158490_15158765_15158945_15160747_15160863_15161718_15161876_15161959_15162067_15163745_15163791_15164149_15164287_15167596_15167742_15167872_15167933_15169220_15169289_15172355_15172470_15172641_15172730_15173397_15173437_15175116_15175223_15178769_15178934_15179133_15179171_15180634_15180658_15181125_15181182_15182644
ES.32546.2	chr8	+	4584	33	ISM	ENSMUSG00000031461.5	ENSMUST00000033842.4	5075	37	11865	121	9328	-121	3prime_fragment	FALSE	canonical	0	0	junction_1	0.649519052838329	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGTGATTTCTATGC	NA	False	NA	NA	False	AATAAA	-14	NA	15119517	15183420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_15119806_15120671_15120765_15127818_15127908_15127996_15128048_15130858_15131024_15131261_15131424_15133229_15133372_15134460_15134661_15135260_15135315_15148341_15148470_15149174_15149359_15152482_15152658_15154066_15154189_15156279_15156468_15158362_15158490_15158765_15158945_15160747_15160863_15161718_15161876_15161959_15162067_15163745_15163791_15164149_15164287_15167596_15167742_15167872_15167933_15169220_15169289_15172355_15172470_15172641_15172730_15173397_15173437_15175116_15175223_15178769_15178934_15179133_15179171_15180634_15180658_15181125_15181182_15182644
ES.32546.3	chr8	+	4380	31	ISM	ENSMUSG00000031461.5	ENSMUST00000033842.4	5075	37	19988	122	17451	-122	3prime_fragment	FALSE	canonical	0	0	junction_1	0.649786289653931	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGTTGTGATTTCTATG	NA	False	NA	NA	False	AATAAA	-13	NA	15127640	15183419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_15127908_15127996_15128048_15130858_15131024_15131261_15131424_15133229_15133372_15134460_15134661_15135260_15135315_15148341_15148470_15149174_15149359_15152482_15152658_15154066_15154189_15156279_15156468_15158362_15158490_15158765_15158945_15160747_15160863_15161718_15161876_15161959_15162067_15163745_15163791_15164149_15164287_15167596_15167742_15167872_15167933_15169220_15169289_15172355_15172470_15172641_15172730_15173397_15173437_15175116_15175223_15178769_15178934_15179133_15179171_15180634_15180658_15181125_15181182_15182644
ES.32547.1	chr8	+	199	1	Intergenic	novelGene_26539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAATTACGTGTAATG	NA	False	NA	NA	False	NA	NA	NA	15264106	15264305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_15264100_15264300
ES.32548.1	chr8	+	506	3	Intergenic	novelGene_26540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGTTTTTTATTCACC	NA	False	NA	NA	False	AATAAA	-14	NA	15899010	15915830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_15899117_15913082_15913280_15915627
ES.32549.1	chr8	-	2264	1	Intergenic	novelGene_26541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16575362	16573098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_16573100_16575400
ES.3255.1	chr10	-	3971	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	3	-731	3	130	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCCTACCTTACTCAT	NA	False	NA	NA	False	NA	NA	NA	79473749	79453754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.3	chr10	-	6359	10	NIC	ENSMUSG00000020312.13	novel	3243	13	NA	NA	58	120	intron_retention	FALSE	canonical	3	21	junction_2	2.09644025156813	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATTAAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	79473694	79453764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79455934_79456887_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465963_79467098_79467170_79473282
ES.3255.4	chr10	-	3243	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	-2	2	-2	-2	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACTTCTGGTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	79473754	79454487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.5	chr10	-	3084	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	31	128	31	-128	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTAAAAGGACTATGATG	NA	False	NA	NA	False	NA	NA	NA	79473721	79454613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.6	chr10	-	4316	12	NIC	ENSMUSG00000020312.13	novel	3243	13	NA	NA	52	-136	intron_retention	FALSE	canonical	3	18	junction_9	2.71207888912296	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAACGTGTAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	79473700	79454621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79455934_79456887_79457022_79458088_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.7	chr10	-	2547	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	37	659	37	-659	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTTCCCCAGTCCC	NA	False	NA	NA	False	GATAAA	-17	NA	79473715	79455144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.8	chr10	-	3624	12	NIC	ENSMUSG00000020312.13	novel	3243	13	NA	NA	30	589	intron_retention	FALSE	canonical	3	18	junction_9	2.71207888912296	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGTGTCTGCTAGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	79473722	79455335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79455934_79456887_79457022_79458088_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.3255.9	chr10	-	4687	11	NIC	ENSMUSG00000020312.13	novel	3243	13	NA	NA	31	586	intron_retention	FALSE	canonical	3	18	junction_8	2.53179778023443	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGCTGTGTCTGCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	79473721	79455338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79455934_79456887_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ES.32550.1	chr8	+	181	1	Intergenic	novelGene_26542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATTTAAAAAAAAAA	4234	False	NA	NA	False	NA	NA	NA	18611597	18611778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18611600_18611800
ES.32551.1	chr8	-	3781	4	Intergenic	novelGene_26543	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	18629886	18625310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18627962_18628556_18629028_18629075_18629396_18629547
ES.32551.2	chr8	-	3931	3	Intergenic	novelGene_26545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	18629886	18625312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18627962_18628556_18629028_18629075
ES.32551.3	chr8	-	4308	4	Intergenic	novelGene_26544	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	18629854	18625312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18628484_18628574_18629028_18629075_18629396_18629490
ES.32552.1	chr8	+	160	1	Intergenic	novelGene_26546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	18642996	18643156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18643000_18643200
ES.32553.1	chr8	+	3794	14	NNC	ENSMUSG00000039842.16	novel	768	4	NA	NA	-918	-516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.7692307692308	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCCTTGTTCCCTGTA	NA	False	NA	10	True	NA	NA	NA	18644228	18852689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18644382_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.10	chr8	+	3055	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-15	-1351	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	49.9661042132357	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTGTCCTTGAGATA	NA	False	NA	NA	False	NA	NA	NA	18645164	18851854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.11	chr8	+	3573	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-14	-941	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	46.015304888957	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGATTTGTGTGTACA	NA	False	NA	4	True	NA	NA	NA	18645165	18852264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682531_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.13	chr8	+	3200	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	20	1442	-13	-1442	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGACTCATTGTATTTC	NA	False	NA	NA	False	NA	NA	NA	18645166	18851763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.14	chr8	+	3721	12	NNC	ENSMUSG00000039842.16	novel	3878	12	NA	NA	-12	-6023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	65.5758976080956	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCCAGGTATCTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	18645167	18756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18755715
ES.32553.15	chr8	+	3343	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-12	-1355	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	46.0387025249139	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAACCTTTGTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	18645167	18851850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677314_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.16	chr8	+	3747	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.7869399670388	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645167	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18681769_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.17	chr8	+	4627	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-12	224	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGCTTGTCTGGTAATTT	NA	False	NA	NA	False	AGTAAA	-35	NA	18645167	18853429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.19	chr8	+	3622	13	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-8	11816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	63.8357266740185	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAACAAATAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	18645171	18774771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691651_18718969_18719000_18721107_18721271_18738997_18739076_18773725
ES.32553.2	chr8	+	4704	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	-37	-5	-37	5	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAATTTTAATTATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	18645109	18853210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.20	chr8	+	4590	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.7869399670388	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645171	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682616_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.21	chr8	+	4544	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	47.7981868554307	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645171	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.23	chr8	+	4521	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	45.9480382848084	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645172	18853205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.24	chr8	+	3794	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-514	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	64.3895684791071	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTTGTTCCCTGTACA	NA	False	NA	12	True	NA	NA	NA	18645172	18852691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.25	chr8	+	4437	15	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	45.0852367347513	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645172	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682157_18682352_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.26	chr8	+	4357	11	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	51.1809534885782	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645172	18853205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18838254_18838493_18851421
ES.32553.28	chr8	+	3487	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-948	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	48.9671841539509	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATTAAGAGATTTGT	NA	False	NA	-3	True	NA	NA	NA	18645172	18852257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18738997_18739076_18838254_18838493_18851421
ES.32553.29	chr8	+	2492	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	-425	0	-7	0	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTGACCTGTATACC	NA	False	NA	NA	False	ATTAAA	-22	NA	18645172	18682917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
ES.32553.3	chr8	+	3745	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	-20	937	-20	-937	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTTGTGTGTACATATA	NA	False	NA	8	True	NA	NA	NA	18645126	18852268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.30	chr8	+	3882	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-516	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCCTTGTTCCCTGTA	NA	False	NA	10	True	NA	NA	NA	18645172	18852689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.31	chr8	+	4174	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-7	-519	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	46.0387025249139	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATTGGCCTTGTTCCCT	NA	False	NA	7	True	NA	NA	NA	18645172	18852686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677314_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.33	chr8	+	2696	10	NIC	ENSMUSG00000039842.16	novel	2998	12	NA	NA	-6	-166	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	53.6138456412562	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATCTTTATTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	18645173	18702840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18702478
ES.32553.34	chr8	+	5421	13	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-5	4613	intron_retention	FALSE	canonical	0	0	junction_12	48.5658201710718	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGTTGATTGACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	18645174	18744582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18741773
ES.32553.35	chr8	+	3650	1	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-5	-33072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTCTTCTGTTTTTGAA	NA	False	NA	NA	False	ACTAAA	-10	NA	18645174	18648824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645200_18648800
ES.32553.36	chr8	+	3434	10	NNC	ENSMUSG00000039842.16	novel	2998	12	NA	NA	-3	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.6138456412562	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTAGTTATGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	18645176	18703027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18701924
ES.32553.37	chr8	+	4001	8	ISM	ENSMUSG00000039842.16	ENSMUST00000124910.8	3878	12	1	69485	1	-9536	5prime_fragment	FALSE	canonical	3	10	junction_4	57.0130668874984	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGGATTCTCTTGTA	NA	False	NA	NA	False	ATTAAA	-13	NA	18645180	18693470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580
ES.32553.38	chr8	+	3764	14	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	2	-941	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	46.2956795049862	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGATTTGTGTGTACA	NA	False	NA	4	True	NA	NA	NA	18645181	18852264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677335_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.4	chr8	+	3037	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-19	-516	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	47.3133760743783	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCCTTGTTCCCTGTA	NA	False	NA	10	True	NA	NA	NA	18645127	18852689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.40	chr8	+	2545	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	8	-948	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	47.3133760743783	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATTAAGAGATTTGT	NA	False	NA	-3	True	NA	NA	NA	18645187	18852257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.42	chr8	+	5338	7	NIC	ENSMUSG00000039842.16	novel	2067	8	NA	NA	20	8	intron_retention	FALSE	canonical	3	152	junction_1	13.7446959466795	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTATACCTTTCCTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	18645199	18682925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18675691_18677133_18677257_18679561_18679652_18681531
ES.32553.43	chr8	+	2753	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-24	-1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.7497429034477	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCATGACTCATTGTAT	NA	False	NA	NA	False	NA	NA	NA	18645567	18851760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675618_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.44	chr8	+	3535	7	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-16	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	79.3440118863561	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645575	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18681531_18682660_18691580_18691682_18838254_18838493_18851421
ES.32553.45	chr8	+	4049	13	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	62.3156726318152	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18645575	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677314_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.46	chr8	+	2374	12	NNC	ENSMUSG00000039842.16	novel	3878	12	NA	NA	-15	2015	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	65.3797552511036	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTAGTTGTTTGGTTTCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	18645576	18764970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18764691
ES.32553.47	chr8	+	4172	11	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-11	223	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	51.1809534885782	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCTTGTCTGGTAATT	NA	False	NA	NA	False	AGTAAA	-34	NA	18645580	18853428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18838254_18838493_18851421
ES.32553.49	chr8	+	2483	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-9	-525	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	48.8028586075085	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGGCATTGGCCTTG	NA	False	NA	1	True	NA	NA	NA	18645582	18852680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.5	chr8	+	4198	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	-7	471	-7	-471	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGTGTGTCAGCACG	NA	False	NA	55	True	NA	NA	NA	18645139	18852734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.51	chr8	+	3591	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-6	-517	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	45.9480382848084	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGGCCTTGTTCCCTGT	NA	False	NA	9	True	NA	NA	NA	18645585	18852688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.53	chr8	+	7701	12	ISM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	445	108624	0	4612	5prime_fragment	FALSE	canonical	3	150	junction_4	13.6120996249053	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGATTGTTGATTGACTG	NA	False	NA	NA	False	AATAAA	-13	NA	18645591	18744581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997
ES.32553.54	chr8	+	5821	6	NIC	ENSMUSG00000039842.16	novel	2067	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	150	junction_4	15.816447135814	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTGACCTGTATACC	NA	False	NA	NA	False	ATTAAA	-22	NA	18645591	18682917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18679652_18681531
ES.32553.55	chr8	+	1964	7	ISM	ENSMUSG00000039842.16	ENSMUST00000124910.8	3878	12	414	80030	2	8	5prime_fragment	FALSE	canonical	3	10	junction_4	61.4138963644766	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTATACCTTTCCTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	18645593	18682925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531
ES.32553.56	chr8	+	4014	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	48.9671841539509	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645593	18853205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18738997_18739076_18838254_18838493_18851421
ES.32553.57	chr8	+	3025	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	0	-948	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATTAAGAGATTTGT	NA	False	NA	-3	True	NA	NA	NA	18645597	18852257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.58	chr8	+	3155	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	0	-941	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	45.9480382848084	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGATTTGTGTGTACA	NA	False	NA	4	True	NA	NA	NA	18645597	18852264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.59	chr8	+	4060	12	ISM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	12147	6	11696	-6	3prime_fragment	FALSE	canonical	3	150	junction_2	10.8711461300922	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAGAGAAGCAATAATT	NA	False	NA	NA	False	AATAAA	-11	NA	18657293	18853199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.6	chr8	+	4881	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	4	-223	4	223	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCTTGTCTGGTAATT	NA	False	NA	NA	False	AGTAAA	-34	NA	18645150	18853428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.60	chr8	+	2377	6	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	15121	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.3975727797852	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAGCAATAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	18697728	18853202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18697804_18718961_18719004_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.61	chr8	+	3644	5	ISM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	73820	-1348	36359	1348	3prime_fragment	FALSE	canonical	3	163	junction_3	7.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTTCAATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	18718966	18854553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32553.62	chr8	+	4177	1	Antisense	novelGene_ENSMUSG00000031465.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACTCTGCTAAGTATG	NA	False	NA	NA	False	NA	NA	NA	18748848	18753025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_18748800_18753000
ES.32553.63	chr8	+	5941	1	Genic_Genomic	ENSMUSG00000039842.16	novel	NA	NA	NA	NA	169562	4905	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGCAGTACGAGTGTGA	5583	False	NA	NA	False	AATAAA	-20	NA	18852169	18858110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_18852200_18858100
ES.32553.64	chr8	+	7999	1	Genic_Genomic	ENSMUSG00000039842.16	novel	NA	NA	NA	NA	170217	7618	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAATAAAT	6238	False	NA	NA	False	NA	NA	NA	18852824	18860823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_18852800_18860800
ES.32553.7	chr8	+	4300	12	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	64.0260793971894	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645155	18853205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.8	chr8	+	4419	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	10	5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAATTTTAATTATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	18645156	18853210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
ES.32553.9	chr8	+	4720	14	NNC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	-15	205	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	46.015304888957	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCTTGTTAATGCTAC	NA	False	NA	NA	False	AGTAAA	-16	NA	18645164	18853410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682531_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ES.32554.1	chr8	-	1816	2	Antisense	novelGene_ENSMUSG00000039842.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGTGTGTACTGAACA	NA	False	NA	NA	False	AATAAA	-19	NA	18645492	18638398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_18639767_18645044
ES.32554.2	chr8	-	1444	1	Intergenic	novelGene_26547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18645111	18643667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18643700_18645100
ES.32555.1	chr8	-	1706	1	Intergenic	novelGene_26548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGGAGGAAGTGCAA	NA	False	NA	NA	False	AAAAAG	-6	NA	18701446	18699740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18699700_18701400
ES.32556.1	chr8	-	5148	1	Intergenic	novelGene_26549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAAATTAAAAGTTTAG	6193	False	NA	NA	False	NA	NA	NA	18735385	18730237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18730200_18735400
ES.32557.1	chr8	-	1446	5	FSM	ENSMUSG00000031465.7	ENSMUST00000170200.2	652	5	-42	-752	-42	752	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGTGATTATGTTTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	18749605	18741350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_18742225_18744412_18744544_18748059_18748227_18749083_18749186_18749433
ES.32558.1	chr8	-	4072	1	Intergenic	novelGene_26550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTTGTGGCGTCCTT	NA	False	NA	NA	False	NA	NA	NA	18884335	18880263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18880300_18884300
ES.32559.1	chr8	+	161	1	Intergenic	novelGene_26551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAT	5921	False	NA	NA	False	NA	NA	NA	18888156	18888317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18888200_18888300
ES.3256.1	chr10	-	190	1	Intergenic	novelGene_2546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCAGGGACCTCTCAG	NA	False	NA	NA	False	NA	NA	NA	79492786	79492596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79492600_79492800
ES.32560.1	chr8	+	2934	1	Intergenic	novelGene_26552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCTCATTTAGATGTG	7305	False	NA	NA	False	NA	NA	NA	18889540	18892474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18889500_18892500
ES.32561.1	chr8	+	1510	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	-30	9299	-30	-1359	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTCTGTTT	NA	False	NA	24	True	ATTAAA	-28	NA	18896262	18932078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.10	chr8	+	4766	6	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	13	-1370	intron_retention	FALSE	canonical	3	636	junction_4	33.3286663399543	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTTGTTTTGTT	NA	False	NA	13	True	ATTAAA	-17	NA	18896307	18932067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18929745_18931753
ES.32561.11	chr8	+	4694	7	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	13	-6	intron_retention	FALSE	canonical	3	636	junction_4	36.4783040541452	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAATTTGCTTCTTGTTT	NA	False	NA	9	True	AATAAA	-19	NA	18896307	18933431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
ES.32561.12	chr8	+	1910	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	21	8848	19	-908	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATCTGTCTAGTGT	NA	False	NA	NA	False	AAAAAG	-19	NA	18896313	18932529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.13	chr8	+	1790	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	26	8963	24	-1023	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGTGATACTGGTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	18896318	18932414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.14	chr8	+	2853	9	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	290.998469712471	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896326	18933437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18908139_18908188_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.15	chr8	+	2028	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	75	8676	73	-736	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAGTCTCCTTTGTCA	NA	False	NA	NA	False	AATAGA	-16	NA	18896367	18932701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.17	chr8	+	2577	8	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	205	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	243.228203923134	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCTTCTTGTTTTT	NA	False	NA	11	True	AATAAA	-21	NA	18896499	18933433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929671_18929745_18931753
ES.32561.18	chr8	+	5932	6	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	217	0	intron_retention	FALSE	canonical	3	636	junction_4	33.3286663399543	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896511	18933437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18929745_18931753
ES.32561.19	chr8	+	3241	8	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	227	-1369	intron_retention	FALSE	canonical	0	0	junction_1	303.893039722592	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTGTTTTGTTT	NA	False	NA	14	True	ATTAAA	-18	NA	18896521	18932068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18906277_18906402_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
ES.32561.2	chr8	+	2859	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	-20	7940	-20	0	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896272	18933437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.20	chr8	+	3433	7	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	257	-1023	intron_retention	FALSE	canonical	3	636	junction_4	36.4783040541452	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATGTGATACTGGTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	18896551	18932414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
ES.32561.21	chr8	+	1345	9	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	257	-1369	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	296.354701962024	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTTTTGTTTTGTTT	NA	False	NA	14	True	ATTAAA	-18	NA	18896551	18932068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18927487_18927622_18928022_18928185_18929620_18929745_18931753
ES.32561.23	chr8	+	2388	6	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	259	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	263.142850938421	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCTTCTTGTTTTT	NA	False	NA	11	True	AATAAA	-21	NA	18896553	18933433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.24	chr8	+	5112	7	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	259	-902	intron_retention	FALSE	canonical	0	0	junction_1	321.033746928055	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTAGTGTATATTT	NA	False	NA	NA	False	AAAAAG	-25	NA	18896553	18932535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18906277_18906402_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18929745_18931753
ES.32561.25	chr8	+	2707	9	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	259	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	296.354701962024	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATTTGCTTCTTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	18896553	18933432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18927487_18927622_18928022_18928185_18929620_18929745_18931753
ES.32561.26	chr8	+	10518	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	261	0	259	0	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTACTATGATGTTTA	NA	False	NA	NA	False	NA	NA	NA	18896553	18941377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.27	chr8	+	3523	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	309	6947	307	993	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGATCACTAGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	18896601	18934430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.28	chr8	+	977	7	ISM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	15198	9302	15196	-1362	3prime_fragment	FALSE	canonical	3	636	junction_3	30.802687472939	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTCTG	NA	False	NA	21	True	ATTAAA	-25	NA	18911490	18932075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.3	chr8	+	4469	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	3	6307	1	1633	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACGTTGACATGTCCATG	NA	False	NA	NA	False	ATTAAA	-15	NA	18896295	18935070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.4	chr8	+	2794	8	NNC	ENSMUSG00000031467.11	novel	2841	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.544266446259	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896295	18933437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929738_18931788
ES.32561.5	chr8	+	2925	8	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	243.336921043349	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGCTTCTTGTTTTT	NA	False	NA	11	True	AATAAA	-21	NA	18896296	18933433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18925961_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.7	chr8	+	3343	7	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	3	-1367	intron_retention	FALSE	canonical	3	636	junction_4	36.4783040541452	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGTTTTGTTTTG	NA	False	NA	16	True	ATTAAA	-20	NA	18896297	18932070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
ES.32561.8	chr8	+	3635	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	14	7130	12	810	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGTCTATGATTCTTT	NA	False	NA	NA	False	NA	NA	NA	18896306	18934247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32561.9	chr8	+	2729	8	NNC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	13	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	239.860078259925	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAGGGAAAATTTGCTT	NA	False	NA	2	True	AATAAA	-12	NA	18896307	18933424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_18896795_18911492_18911563_18918908_18918989_18920899_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ES.32562.1	chr8	-	4296	1	Intergenic	novelGene_26553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGAGGTTGTCTTCTT	6282	False	NA	NA	False	AATAAA	-20	NA	18895990	18891694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18891700_18896000
ES.32562.2	chr8	-	2035	1	Intergenic	novelGene_26554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTATGCTTAAGCTTAC	6066	False	NA	NA	False	NA	NA	NA	18896206	18894171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18894200_18896200
ES.32562.3	chr8	-	1781	1	Antisense	novelGene_ENSMUSG00000031467.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACAGGTTCTTTTATT	5273	False	NA	NA	False	NA	NA	NA	18896999	18895218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_18895200_18897000
ES.32562.4	chr8	-	350	1	Intergenic	novelGene_26555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTCTACTGTGCGT	6106	False	NA	NA	False	NA	NA	NA	18896166	18895816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18895800_18896200
ES.32563.1	chr8	-	198	1	Intergenic	novelGene_26556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGAGCCCCAAGTAGC	5466	False	NA	NA	False	NA	NA	NA	18945482	18945284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18945300_18945500
ES.32564.1	chr8	+	261	2	Antisense	novelGene_ENSMUSG00000110530.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	18946034	18946588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_18946170_18946462
ES.32564.2	chr8	+	3006	2	Intergenic	novelGene_26557	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCCGAGTTTAAGGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	18946044	18986269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18946170_18983388
ES.32564.3	chr8	+	512	1	Intergenic	novelGene_26559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	18946412	18946924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18946400_18946900
ES.32564.4	chr8	+	176	1	Intergenic	novelGene_26558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	18946412	18946588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_18946400_18946600
ES.32565.1	chr8	+	581	3	Antisense	novelGene_ENSMUSG00000053695.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATGTGTCATTGGAGG	NA	False	NA	NA	False	NA	NA	NA	19000320	19048663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_19000447_19002823_19002871_19048255
ES.32566.1	chr8	-	3204	2	Intergenic	novelGene_26560	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAATTGATGAG	7242	False	NA	NA	False	NA	NA	NA	18970977	18967729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_18970667_18970710
ES.32567.1	chr8	-	3474	7	NNC	ENSMUSG00000039814.16	novel	2838	7	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7285185734741	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTTAGTATCTAATT	NA	False	NA	0	True	NA	NA	NA	19000974	18982741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_18985272_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ES.32567.10	chr8	-	1244	6	ISM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	20	4195	-18	-3836	5prime_fragment	FALSE	canonical	2	24	junction_3	7.30479294709987	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	19000971	18986939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ES.32567.2	chr8	-	2931	7	NNC	ENSMUSG00000039814.16	novel	3176	7	NA	NA	12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	13.7204227340122	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19000977	18982744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000784
ES.32567.3	chr8	-	2925	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	-88	1	-88	-1	multi-exon	FALSE	canonical	2	24	junction_4	7.05730511991338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	-4	True	NA	NA	NA	19001079	18982745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ES.32567.4	chr8	-	3504	7	NNC	ENSMUSG00000039814.16	novel	3911	7	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.7204227340122	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	-4	True	NA	NA	NA	19000977	18982745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000210
ES.32567.5	chr8	-	5447	6	NIC	ENSMUSG00000039814.16	novel	2838	7	NA	NA	9	-1	intron_retention	FALSE	canonical	2	24	junction_3	7.30479294709987	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	-4	True	NA	NA	NA	19000980	18982745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ES.32567.6	chr8	-	3163	7	FSM	ENSMUSG00000039814.16	ENSMUST00000055503.12	3176	7	12	1	12	-1	multi-exon	FALSE	canonical	1	1	junction_6	13.3998341614945	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTAGTGTTAGTATCT	NA	False	NA	-4	True	NA	NA	NA	19000977	18982745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000551
ES.32567.8	chr8	-	2807	7	NNC	ENSMUSG00000039814.16	novel	2838	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.6798716693136	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCATTAGTGTTAGTAT	NA	False	NA	-6	True	NA	NA	NA	19000966	18982747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990832_18991956_18992146_18998574_18998759_19000891
ES.32567.9	chr8	-	1546	6	ISM	ENSMUSG00000039814.16	ENSMUST00000152974.8	3116	7	2	4189	2	-3833	5prime_fragment	FALSE	canonical	1	1	junction_5	14.6751490622753	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	19000930	18986936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000551
ES.32568.1	chr8	+	700	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-26	-83	-26	83	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGGGAC	7091	False	NA	NA	False	AATAAA	-18	NA	19542925	19543625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_19542900_19543600
ES.32569.1	chr8	-	5067	1	Intergenic	novelGene_26561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	19582322	19577255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_19577300_19582300
ES.3257.1	chr10	-	172	1	Intergenic	novelGene_2547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	79493169	79492997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79493000_79493200
ES.32570.1	chr8	-	939	6	NNC	ENSMUSG00000110463.2	novel	838	5	NA	NA	54755	13921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.33589667773576	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGAGAACCTCTTAAAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	19660583	19630994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_19631295_19631392_19631578_19637211_19637400_19657019_19657138_19659091_19659171_19660514
ES.32571.1	chr8	+	179	1	Intergenic	novelGene_26562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGTAAACATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	19728509	19728688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19728500_19728700
ES.32572.1	chr8	+	1696	5	NNC	ENSMUSG00000087153.9	novel	862	5	NA	NA	-179	2370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	219.919729674261	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAACAAAAACAAAAA	2718	False	NA	NA	False	NA	NA	NA	19732285	19750122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19732672_19741536_19741657_19743566_19743735_19747519_19747753_19749333
ES.32572.10	chr8	+	2433	1	Intergenic	novelGene_26564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACATGGGTTTTCACA	NA	False	NA	NA	False	NA	NA	NA	19748418	19750851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19748400_19750900
ES.32572.11	chr8	+	4814	1	Intergenic	novelGene_26565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	19752466	19757280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19752500_19757300
ES.32572.12	chr8	+	4109	1	Intergenic	novelGene_26566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGGTTTTGTTTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	19752574	19756683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19752600_19756700
ES.32572.13	chr8	+	6718	2	Intergenic	novelGene_26567	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGAAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	19753184	19760220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19758083_19758400
ES.32572.14	chr8	+	192	1	Intergenic	novelGene_26568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	19755235	19755427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19755200_19755400
ES.32572.2	chr8	+	4492	5	NNC	ENSMUSG00000087153.9	novel	862	5	NA	NA	-159	-277	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	212.217311970536	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAATAAAAAGTAAAATA	2738	False	NA	NA	False	AATGAA	-19	NA	19732305	19747475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19732505_19737619_19737921_19741536_19741657_19743566_19745450_19745486
ES.32572.3	chr8	+	3707	3	ISM	ENSMUSG00000087153.9	ENSMUST00000155660.9	862	5	5207	848	5207	-848	internal_fragment	FALSE	canonical	3	76	junction_1	220	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATATAAATAGGTGTGG	8104	False	NA	NA	False	AATAAA	-11	NA	19737671	19746904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_19737921_19741536_19741657_19743566
ES.32572.4	chr8	+	7625	2	NNC	ENSMUSG00000087153.9	novel	862	5	NA	NA	7299	-319	intron_retention	TRUE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTTGCTGGGATTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	19739763	19747433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19745442_19745486
ES.32572.5	chr8	+	4678	2	ISM	ENSMUSG00000087153.9	ENSMUST00000155660.9	862	5	8078	622	8078	-622	internal_fragment	FALSE	canonical	3	516	junction_1	0	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTCTGTGGCTGCTTT	NA	False	NA	NA	False	AATAAA	-39	NA	19740542	19747130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_19741657_19743566
ES.32572.6	chr8	+	3258	2	NNC	ENSMUSG00000087153.9	novel	862	5	NA	NA	11133	-852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19743597	19746900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19745442_19745486
ES.32572.7	chr8	+	2452	2	Intergenic	novelGene_26563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19744411	19746900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19745450_19745486
ES.32572.8	chr8	+	122	1	ISM	ENSMUSG00000087153.9	ENSMUST00000155660.9	862	5	15097	69	15097	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCTGCTGCTGCTGCT	NA	False	NA	NA	False	AAAACA	-15	NA	19747561	19747683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_19747600_19747700
ES.32572.9	chr8	+	2775	2	NNC	ENSMUSG00000087153.9	novel	862	5	NA	NA	15137	8928	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGGTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	19747601	19756680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19747753_19754056
ES.32573.1	chr8	+	4135	5	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-181932	-760	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	591.515638001228	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834533	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19834560_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.10	chr8	+	4547	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-125	-552	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTACTCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-32	NA	19834636	20045336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.100	chr8	+	929	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-3879	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGCTCAGCGAGAGCC	NA	False	NA	NA	False	AGTAAA	-26	NA	19834749	20042009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834854_20030548_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.101	chr8	+	2848	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-775	multi-exon	FALSE	non_canonical	0	0	junction_1	639.347917803757	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834749	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20043729_20044914
ES.32573.102	chr8	+	1878	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-777	multi-exon	FALSE	non_canonical	0	0	junction_5	647.757979495429	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACATAAATATAAATAG	NA	False	NA	NA	False	AATAAA	-5	NA	19834749	20045111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811_20042773_20044927
ES.32573.103	chr8	+	4799	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-177	multi-exon	FALSE	non_canonical	0	0	junction_1	597.964045741882	2506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834749	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.104	chr8	+	4288	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-12	185977	multi-exon	TRUE	canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834749	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834956_20016767
ES.32573.105	chr8	+	8266	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-177	intron_retention	FALSE	canonical	3	906	junction_2	184.335443025902	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834749	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20039904_20041811
ES.32573.106	chr8	+	5321	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	335	intron_retention	FALSE	canonical	3	606	junction_2	335.627770007191	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	19834749	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.107	chr8	+	6717	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-177	intron_retention	FALSE	canonical	3	606	junction_2	368.50327904466	2506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834749	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783
ES.32573.108	chr8	+	4277	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-12	185977	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834749	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834901_20016723
ES.32573.109	chr8	+	4349	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-2738	intron_retention	FALSE	non_canonical	0	0	junction_3	505.486646707903	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTTATGAGTGTGTC	NA	False	NA	NA	False	ATTAAA	-24	NA	19834749	20043150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20037903_20038097_20039783
ES.32573.11	chr8	+	4847	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-118	-177	multi-exon	FALSE	canonical	3	16	junction_2	585.256140506018	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834643	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32573.110	chr8	+	4375	6	Fusion	ENSMUSG00000071796.14_ENSMUSG00000110669.2	novel	936	6	NA	NA	-12	-574	multi-exon	FALSE	canonical	0	0	junction_1	522.264530673872	2729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834749	20172420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834913_20152180_20152241_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.111	chr8	+	9758	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-760	intron_retention	FALSE	canonical	3	606	junction_2	307	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834749	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860
ES.32573.113	chr8	+	4277	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-760	multi-exon	FALSE	canonical	2	7	junction_5	610.766272808183	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834749	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.114	chr8	+	3233	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-12	185977	multi-exon	FALSE	canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834749	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834867_20017733
ES.32573.115	chr8	+	7849	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-11	-760	intron_retention	FALSE	canonical	3	606	junction_2	322.665289253258	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834750	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20039904_20041811
ES.32573.116	chr8	+	4079	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-11	120958	multi-exon	FALSE	non_canonical	0	0	junction_4	524.848251878579	2736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAAGCTCATCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	19834750	20176456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20045732_20049138_20176399
ES.32573.117	chr8	+	4271	1	FSM	ENSMUSG00000110669.2	ENSMUST00000212002.2	111	1	-11	-4149	-11	4149	mono-exon	FALSE	NA	NA	NA	NA	NA	1352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTTAATAGTTGAGCAT	NA	False	NA	NA	False	NA	NA	NA	19834750	19839021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_19834800_19839000
ES.32573.118	chr8	+	4259	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-9	-561	multi-exon	FALSE	canonical	0	0	junction_1	689.910682624932	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	19834752	20045327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834880_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.119	chr8	+	4677	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-9	186623	multi-exon	FALSE	canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAATGGACTTTTTAT	NA	False	NA	NA	False	GATAAA	-11	NA	19834752	20021495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19835079_20017144
ES.32573.12	chr8	+	2186	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-116	-2737	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTATGAGTGTGTCT	NA	False	NA	NA	False	ATTAAA	-25	NA	19834645	20043151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.120	chr8	+	3428	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-8	-2741	multi-exon	FALSE	non_canonical	0	0	junction_5	580.583981866534	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834753	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20038253_20039904_20041811_20042916_20043091
ES.32573.122	chr8	+	1713	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-7	2969	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATTTTTAATTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	19834754	19837841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19835152_19836525
ES.32573.124	chr8	+	1137	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-7	-3667	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATCTGAGTCTTGAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	19834754	20042221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.126	chr8	+	2230	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-7	-2741	multi-exon	FALSE	non_canonical	0	0	junction_1	597.964045741882	2486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834754	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.127	chr8	+	4068	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-7	120948	multi-exon	TRUE	non_canonical	0	0	junction_4	536.92661276938	2736	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTCATATATGAAGCT	NA	False	NA	NA	False	NA	NA	NA	19834754	20176446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20045732_20049153_20176415
ES.32573.128	chr8	+	4283	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-7	185977	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834754	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834963_20016774
ES.32573.129	chr8	+	4293	6	Fusion	ENSMUSG00000071796.14_ENSMUSG00000110669.2	novel	936	6	NA	NA	-7	-583	multi-exon	FALSE	canonical	0	0	junction_1	564.72740326639	2729	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATAGGTGTGGCA	NA	False	NA	NA	False	AATAAA	-13	NA	19834754	20172411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834913_20152180_20152241_20157802_20158108_20163109_20163409_20167037_20167158_20169060
ES.32573.13	chr8	+	4382	2	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	4009	6	NA	NA	-116	-25039	multi-exon	TRUE	canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834645	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20016688
ES.32573.130	chr8	+	7131	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-7	-2322	intron_retention	FALSE	canonical	3	12	junction_4	555.479972636278	2509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTGTCTGTTCACAGC	NA	False	NA	NA	False	NA	NA	NA	19834754	20053176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20045999_20052877
ES.32573.131	chr8	+	7176	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-6	-2741	intron_retention	FALSE	canonical	3	1220	junction_1	108.676891134531	2486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834755	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20036160_20039783_20039904_20041811
ES.32573.132	chr8	+	4100	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-6	-775	multi-exon	FALSE	canonical	0	0	junction_1	557.377645766315	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834755	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20026680_20026747_20030550_20030757_20035860_20036156_20039783_20039904_20041811
ES.32573.133	chr8	+	2061	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-6	-2742	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTTTATGAGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	19834755	20043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.134	chr8	+	3809	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-5	-3078	intron_retention	FALSE	canonical	3	606	junction_2	368.50327904466	2482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCAGCTAGTGCTAATT	NA	False	NA	NA	False	AATACA	-15	NA	19834756	20042810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783
ES.32573.135	chr8	+	9739	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-5	-177	intron_retention	FALSE	canonical	3	1220	junction_1	108.676891134531	2506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834756	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20036160_20039783_20039904_20041811
ES.32573.136	chr8	+	6191	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-4	333	intron_retention	FALSE	canonical	3	23	junction_4	551.056882272602	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCATTCAACGTTAGG	NA	False	NA	NA	False	AATAAA	-13	NA	19834757	20046221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20040764
ES.32573.137	chr8	+	3798	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-4	-2741	intron_retention	FALSE	non_canonical	0	0	junction_2	683.005673475704	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834757	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030753_20035860_20036160_20039783_20042916_20043091
ES.32573.139	chr8	+	8248	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-3	-177	intron_retention	FALSE	canonical	3	80	junction_2	568.885069431623	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834758	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20039904_20041811
ES.32573.14	chr8	+	4583	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-116	-760	multi-exon	FALSE	canonical	0	0	junction_2	634.617491092075	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834645	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_19835922_19836176_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.140	chr8	+	1100	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	5	350	multi-exon	FALSE	canonical	1	1	junction_4	638.033110426097	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGGAAGGGGATGCCT	NA	False	NA	NA	False	AATAAA	-30	NA	19834766	20046238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20039783_20039904_20041811_20041980_20045732
ES.32573.142	chr8	+	925	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	6	-3867	multi-exon	FALSE	canonical	3	80	junction_2	557.921813518704	2470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCATCTTTTCTT	NA	False	NA	NA	False	AGTAAA	-38	NA	19834767	20042021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.144	chr8	+	6083	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	30	-157	multi-exon	FALSE	non_canonical	0	0	junction_1	575.616408730675	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGTACCAGATGTCTGT	NA	False	NA	NA	False	AATAAA	-34	NA	19834791	20045731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834950_20016760_20018273_20030550_20030924_20039783_20039904_20041811
ES.32573.145	chr8	+	4123	2	Intergenic	novelGene_26569	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834918	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19835096_20016903
ES.32573.146	chr8	+	3983	2	Intergenic	novelGene_26570	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19835054	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19835104_20016915
ES.32573.147	chr8	+	3248	2	Intergenic	novelGene_26571	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19835787	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19838845_20020658
ES.32573.148	chr8	+	4380	2	Intergenic	novelGene_26572	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTTTTAGAATGATGG	NA	False	NA	NA	False	AATAAA	-15	NA	19844109	19850070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_19848403_19849983
ES.32573.149	chr8	+	5337	6	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-166611	-2739	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	639.347917803757	2474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	19849854	20043149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19849866_20027011_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.15	chr8	+	4401	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-116	-775	multi-exon	FALSE	canonical	0	0	junction_2	638.181290857073	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834645	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_19835922_19836176_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.150	chr8	+	4445	1	Genic_Genomic	ENSMUSG00000071793.13	novel	NA	NA	NA	NA	-61	-25039	mono-exon	FALSE	NA	NA	NA	NA	NA	2363	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016404	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20016400_20020800
ES.32573.151	chr8	+	3406	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-60	3202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	324.058336654923	2521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGAAGTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	20016405	20058700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20039783_20039904_20052877_20053142_20055368_20055417_20055523_20055604_20056462
ES.32573.152	chr8	+	4209	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-44	-760	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016421	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.153	chr8	+	925	3	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-28	-9560	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	12	2450	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATATCATGATTATG	NA	False	NA	NA	False	NA	NA	NA	20016437	20036328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860
ES.32573.154	chr8	+	2379	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	-26	12349	-26	-2739	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	20016439	20043149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.155	chr8	+	2067	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-15	-2741	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	2472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016450	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
ES.32573.156	chr8	+	4930	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	-15	9787	-15	-177	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016450	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.157	chr8	+	4515	7	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-127396	-387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	522.81016843805	2715	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTTTTTAAGCAGGG	NA	False	NA	NA	False	AATAAA	-11	NA	20016451	20172607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016461_20143728_20144003_20152180_20152241_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.158	chr8	+	4345	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	-13	10370	-13	-760	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016452	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.159	chr8	+	3750	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	-12	10964	-12	-1354	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2485	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTCCGTCCTACTGT	NA	False	NA	NA	False	NA	NA	NA	20016453	20044534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.16	chr8	+	4211	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-116	-703	multi-exon	FALSE	canonical	3	80	junction_2	557.921813518704	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGCTTCCAGAGCATT	NA	False	NA	NA	False	TATAAA	-20	NA	19834645	20045185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.160	chr8	+	2903	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-9	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	519.250844968017	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016456	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20043367_20045732
ES.32573.161	chr8	+	4624	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-8	-177	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	2492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016457	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
ES.32573.162	chr8	+	4873	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-8	-159	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	574.067940230074	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTGTACCAGATGTCT	NA	False	NA	NA	False	AATAAA	-32	NA	20016457	20045729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32573.163	chr8	+	7343	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	-8	9275	-8	335	intron_retention	FALSE	canonical	3	606	junction_2	367.482728241145	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016457	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783
ES.32573.164	chr8	+	4409	2	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	4659	5	NA	NA	-8	-24860	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016457	20148134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20016626_20143893
ES.32573.165	chr8	+	1380	7	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	4659	5	NA	NA	-6	3821	multi-exon	TRUE	non_canonical	0	0	junction_1	257.834195215108	2741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTGGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	20016459	20182488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20016530_20143798_20143957_20157802_20158009_20163109_20163405_20173024_20173282_20179856_20180121_20182358
ES.32573.166	chr8	+	3063	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-6	-769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	421.549522594914	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATAGGTGTGGCA	NA	False	NA	NA	False	AATAAA	-13	NA	20016459	20045119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20038399_20045029
ES.32573.167	chr8	+	1386	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-4	335	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	334.006320632143	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016461	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036156_20045732
ES.32573.168	chr8	+	4322	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-3	-763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.964045741882	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGTGTGGCACCATTC	NA	False	NA	NA	False	AATAAA	-19	NA	20016462	20045125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.169	chr8	+	2088	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	0	12614	0	-3004	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2469	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGTACAATATTTATG	NA	False	NA	NA	False	NA	NA	NA	20016465	20042884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.17	chr8	+	4382	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	-181819	-25039	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834646	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_19834656_20016476
ES.32573.170	chr8	+	4033	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-760	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016465	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
ES.32573.171	chr8	+	1564	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	1	335	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_5	526.554992379713	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016466	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20041871_20045732
ES.32573.172	chr8	+	1058	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	1	-3866	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTCATCTTTTCTTT	NA	False	NA	NA	False	AGTAAA	-39	NA	20016466	20042022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.173	chr8	+	1846	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	1	-3078	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCAGCTAGTGCTAATT	NA	False	NA	NA	False	AATACA	-15	NA	20016466	20042810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.174	chr8	+	4760	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	1	-164	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCAGGCGTGTACCAGA	NA	False	NA	NA	False	AATAAA	-27	NA	20016466	20045724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.176	chr8	+	6799	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	4	9807	4	-197	intron_retention	FALSE	canonical	3	606	junction_2	367.482728241145	2492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20016469	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783
ES.32573.177	chr8	+	2184	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	4	-2737	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTATGAGTGTGTCT	NA	False	NA	NA	False	ATTAAA	-25	NA	20016469	20043151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.178	chr8	+	1015	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	4	-3607	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	550.009898900819	2460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACGTTCTCCTGTCTC	NA	False	NA	NA	False	CATAAA	-12	NA	20016469	20042281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20039783_20039904_20041811
ES.32573.179	chr8	+	2171	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	4	-2741	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	548.643782430823	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016469	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.18	chr8	+	4301	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-113	-775	multi-exon	FALSE	non_canonical	0	0	junction_1	597.964045741882	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834648	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834851_20030545_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.180	chr8	+	4538	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	4	10160	4	-550	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTACTCTTCTGTGGCT	NA	False	NA	NA	False	AATAAA	-34	NA	20016469	20045338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.181	chr8	+	4734	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	5	-177	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	548.643782430823	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016470	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.182	chr8	+	4143	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	-765	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.074133193336	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGGTGTGGCACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	20016472	20045123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.183	chr8	+	1351	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	478	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	385.262104143256	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGCAAGAGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	20016472	20046366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732
ES.32573.184	chr8	+	1872	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	410.831034476327	2519	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	20016472	20056100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732_20045999_20052877_20053142_20055368_20055417_20055523
ES.32573.185	chr8	+	3584	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	2544	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	334.006320632143	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGGAGAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	20016472	20048432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036156_20045732
ES.32573.186	chr8	+	4149	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	-760	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	548.643782430823	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016472	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.187	chr8	+	4375	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	7	-543	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2488	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGTGGCTGCTTTTC	NA	False	NA	NA	False	AATAAA	-41	NA	20016472	20045345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.188	chr8	+	4109	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	9	3238	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	385.262104143256	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	20016474	20049126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732
ES.32573.189	chr8	+	1213	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	10	13479	10	-3869	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20016475	20042019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.190	chr8	+	4540	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	10	-760	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	556.620301462316	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016475	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.191	chr8	+	6229	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	11	10370	11	-760	intron_retention	FALSE	canonical	3	606	junction_2	367.482728241145	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016476	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783
ES.32573.192	chr8	+	5728	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	15	-766	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	579.671620402448	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	20016480	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20018273_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.193	chr8	+	4111	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	18	-25039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016483	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016890_20017144
ES.32573.194	chr8	+	4867	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	18	-197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.964045741882	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20016483	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.195	chr8	+	2956	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	20	333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	644.976140816249	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCATTCAACGTTAGG	NA	False	NA	NA	False	AATAAA	-13	NA	20016485	20046221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20032503_20032588_20035860_20036160_20039783_20039904_20041811_20043367_20045732
ES.32573.196	chr8	+	1469	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	20	13213	20	-3603	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCTCCTGTCTCAGTG	NA	False	NA	NA	False	CATAAA	-16	NA	20016485	20042285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.197	chr8	+	4545	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	20	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	522.08520377425	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGATGTCTTTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	20016485	20045708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20039783_20039904_20041811_20042916_20043091
ES.32573.198	chr8	+	3494	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	-25908	mono-exon	FALSE	NA	NA	NA	NA	NA	2362	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTTAATGGATGGAT	NA	False	NA	NA	False	GATAAA	-31	NA	20016486	20019980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016500_20020000
ES.32573.199	chr8	+	2154	5	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	21	-2741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.074133193336	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016486	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016676_20030546_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.2	chr8	+	1117	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-177	-3867	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCATCTTTTCTT	NA	False	NA	NA	False	AGTAAA	-38	NA	19834584	20042021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.20	chr8	+	1487	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-110	-3597	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCTCAGTGTTCTTA	NA	False	NA	NA	False	CATAAA	-22	NA	19834651	20042291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.201	chr8	+	6037	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	21	-775	intron_retention	FALSE	canonical	3	882	junction_1	279.243422284015	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016486	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783
ES.32573.202	chr8	+	2730	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-3869	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	480.618351709545	2456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20016488	20042019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20038253_20039904_20041811
ES.32573.203	chr8	+	1228	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-3665	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	548.643782430823	2460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTGAGTCTTGAGATA	NA	False	NA	NA	False	ATTAAA	-23	NA	20016488	20042223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.204	chr8	+	4205	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-763	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	636.07766821356	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGTGTGGCACCATTC	NA	False	NA	NA	False	AATAAA	-19	NA	20016488	20045125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20026680_20026747_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.205	chr8	+	3219	8	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	311.845134249521	2519	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	20016488	20056100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20018273_20030550_20030757_20035860_20036156_20045732_20045999_20052877_20053142_20055368_20055417_20055523_20055604_20055824
ES.32573.206	chr8	+	3101	4	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	23	13486	23	-3876	intron_retention	FALSE	canonical	3	606	junction_2	367.482728241145	2456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTCAGCGAGAGCCTCA	NA	False	NA	NA	False	AGTAAA	-29	NA	20016488	20042012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783
ES.32573.208	chr8	+	3171	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-26229	mono-exon	FALSE	NA	NA	NA	NA	NA	2359	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAATTTGTTTTGCCA	NA	False	NA	NA	False	AATAAA	-19	NA	20016488	20019659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016500_20019700
ES.32573.209	chr8	+	2152	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-2741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	534.914423062232	2472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016488	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.21	chr8	+	5724	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-108	-775	multi-exon	FALSE	canonical	0	0	junction_1	639.114262084645	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834653	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20016688_20018273_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.210	chr8	+	2546	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-2741	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	556.620301462316	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016488	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.211	chr8	+	2770	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	23	11909	23	-2299	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATCCATGGCTCCAG	NA	False	NA	NA	False	NA	NA	NA	20016488	20043589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.212	chr8	+	1984	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-2742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	519.250844968017	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTTTATGAGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	20016488	20043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.213	chr8	+	4378	2	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-24860	multi-exon	TRUE	canonical	0	0	junction_1	0	2659	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016488	20148134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20016689_20143956
ES.32573.214	chr8	+	1285	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-3607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.074133193336	2460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACGTTCTCCTGTCTC	NA	False	NA	NA	False	CATAAA	-12	NA	20016488	20042281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.215	chr8	+	3362	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	2505	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_3	385.262104143256	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	20016488	20048393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036156_20045732
ES.32573.216	chr8	+	3274	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	3201	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	346.63906300358	2521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGAAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	20016488	20058699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20039783_20039904_20052877_20053142_20055523_20055604_20056462
ES.32573.217	chr8	+	2659	3	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	2544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	441	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGGAGAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	20016488	20048432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030731_20046153
ES.32573.218	chr8	+	4155	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	580.074133193336	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016488	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016702_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.219	chr8	+	3511	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	2544	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	367.009110922331	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGGAGAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	20016488	20048432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036156_20045732_20047397_20047453
ES.32573.22	chr8	+	4514	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-107	-760	multi-exon	FALSE	non_canonical	0	0	junction_3	574.837716229546	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834654	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20037903_20038097_20039783_20039904_20041811
ES.32573.220	chr8	+	4493	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	597.964045741882	2488	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAGGGGGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	20016488	20045322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.221	chr8	+	4709	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.074133193336	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTAGATGTCTTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	20016488	20045705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.224	chr8	+	5412	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	26	9264	26	346	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGGGCAGGAAGGGGAT	NA	False	NA	NA	False	AATAAA	-26	NA	20016491	20046234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.225	chr8	+	4483	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-775	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	519.124493739219	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016492	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20037903_20038097_20039783_20039904_20041811
ES.32573.226	chr8	+	4316	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-775	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	537.254353169893	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016492	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20037903_20038097_20039783_20039904_20041811
ES.32573.227	chr8	+	4738	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-545	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	556.620301462316	2488	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTCTGTGGCTGCTTT	NA	False	NA	NA	False	AATAAA	-39	NA	20016492	20045343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.228	chr8	+	3818	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-25096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAAAAACCGA	NA	False	NA	NA	False	AATGAA	-4	NA	20016492	20020792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016677_20017158
ES.32573.23	chr8	+	6610	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-105	-197	intron_retention	FALSE	canonical	3	67	junction_3	540.491340253374	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	19834656	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036156_20039783
ES.32573.231	chr8	+	4954	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-177	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	632.672743209315	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016492	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20026680_20026747_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.232	chr8	+	5296	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-2323	intron_retention	FALSE	canonical	1	4	junction_5	517.828388561307	2495	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCTGTTCACAG	NA	False	NA	NA	False	NA	NA	NA	20016492	20053175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20045999_20052887
ES.32573.233	chr8	+	5106	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	27	-177	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	556.620301462316	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20016492	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.234	chr8	+	1100	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	28	-3665	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	2460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTGAGTCTTGAGATA	NA	False	NA	NA	False	ATTAAA	-23	NA	20016493	20042223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
ES.32573.235	chr8	+	2981	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	28	-25039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016493	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016963_20018337
ES.32573.236	chr8	+	1291	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	31	-3603	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	2460	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCTCCTGTCTCAGTG	NA	False	NA	NA	False	CATAAA	-16	NA	20016496	20042285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.237	chr8	+	1920	6	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	4009	6	NA	NA	32	-3728	multi-exon	FALSE	canonical	0	0	junction_1	523.772698792138	2689	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGAGAGCCTCATCTTT	NA	False	NA	NA	False	AGTAAA	-34	NA	20016497	20169266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20016689_20143956_20144855_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.238	chr8	+	4297	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	33	-775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	597.964045741882	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016498	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016702_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.239	chr8	+	6591	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	89	-252	intron_retention	FALSE	canonical	3	16	junction_2	603.293921364666	2491	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTTGAGAAATTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	20016554	20045636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030856_20035860_20036160_20039783
ES.32573.24	chr8	+	6072	8	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-99	602	intron_retention	FALSE	canonical	0	0	junction_6	626.419302749479	2533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	19834662	20056100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20045999_20052877_20053142_20055368_20055417_20055523
ES.32573.240	chr8	+	2370	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	92	-26961	mono-exon	FALSE	NA	NA	NA	NA	NA	2352	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGTTTTTCTGATGAT	NA	False	NA	NA	False	NA	NA	NA	20016557	20018927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016600_20018900
ES.32573.241	chr8	+	7075	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	93	335	intron_retention	FALSE	canonical	3	882	junction_1	279.243422284015	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016558	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783
ES.32573.243	chr8	+	5601	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	94	-760	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	481.631601953194	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016559	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20038253_20039904_20041811
ES.32573.244	chr8	+	4135	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	94	-564	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	2488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGCAGGGGGTAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	20016559	20045324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
ES.32573.245	chr8	+	4409	6	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	936	6	NA	NA	96	4422	multi-exon	FALSE	canonical	2	5	junction_4	498.822854328067	2742	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	20016561	20183089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20016689_20157802_20158176_20163109_20163409_20167037_20167158_20173024_20173282_20179856
ES.32573.246	chr8	+	6210	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	100	-22177	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATAGAGAATTACGTTT	NA	False	NA	NA	False	AAAAAG	-39	NA	20016565	20023711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20022651_20023586
ES.32573.247	chr8	+	4292	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	100	-766	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	632.672743209315	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	20016565	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20026680_20026747_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.248	chr8	+	3512	8	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	101	3203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	303.910096802945	2521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTGAAGTTTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	20016566	20058701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20039783_20039904_20045732_20045999_20052877_20053142_20055368_20055417_20055523_20055604_20056462
ES.32573.249	chr8	+	3463	8	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	101	3201	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	513.464980027154	2521	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGAAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	20016566	20058699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20039783_20039904_20041811_20041980_20045732_20045999_20052877_20053142_20055523_20055604_20056462
ES.32573.25	chr8	+	4334	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-99	-563	multi-exon	FALSE	canonical	3	80	junction_2	557.921813518704	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCAGGGGGTAAATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	19834662	20045325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.250	chr8	+	1964	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	101	-2742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	645.708052364913	2472	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATGTGTTTATGAGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	20016566	20043146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20017517_20017576_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.251	chr8	+	4236	2	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	101	-25039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2363	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016566	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20020469_20020515
ES.32573.252	chr8	+	3315	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	104	3201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585.891628204398	2521	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGAAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	20016569	20058699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030757_20035860_20036160_20039783_20039904_20052877_20053142_20055523_20055604_20056462
ES.32573.253	chr8	+	2013	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	-27305	mono-exon	FALSE	NA	NA	NA	NA	NA	2350	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATAGTTGGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	20016570	20018583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016600_20018600
ES.32573.254	chr8	+	941	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	-3869	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	580.074133193336	2456	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20016570	20042019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016679_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.255	chr8	+	4103	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	-775	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	637.946894341527	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016570	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20017517_20017576_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.256	chr8	+	1971	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	534.914423062232	2493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016570	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20042382_20045732
ES.32573.257	chr8	+	5036	8	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	105	3201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	306.282049551636	2521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGAAGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	20016570	20058699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20038253_20039904_20045732_20045999_20052877_20053142_20055368_20055417_20055523_20055604_20056462
ES.32573.258	chr8	+	6398	3	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-197	intron_retention	FALSE	canonical	3	45	junction_2	418.5	2492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20016571	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20030550_20030924_20039783
ES.32573.259	chr8	+	1801	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	519.250844968017	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCATTCAACGTTAGG	NA	False	NA	NA	False	AATAAA	-13	NA	20016571	20046221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042382_20045732
ES.32573.26	chr8	+	2988	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	4009	6	NA	NA	-97	-25039	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834664	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20016688_20016963_20018337
ES.32573.260	chr8	+	4158	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-760	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	574.067940230074	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016571	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32573.261	chr8	+	2811	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	348.418713619117	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAATATAAATAGGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	20016571	20045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041544_20041618_20041811_20043740_20044915
ES.32573.262	chr8	+	3339	8	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	3202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	305.29269996687	2521	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGAAGTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	20016571	20058700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20039783_20039904_20045732_20045999_20052877_20053142_20055368_20055417_20055523_20055604_20056462
ES.32573.264	chr8	+	3853	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-760	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	669.551757189506	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20016571	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20035860_20036160_20039783_20039904_20041811
ES.32573.265	chr8	+	5489	7	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-1	intron_retention	FALSE	canonical	0	0	junction_6	582.382940073702	2519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACAGTGTGGTTTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	20016571	20055497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20045999_20052877_20053142_20055368
ES.32573.266	chr8	+	4447	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	107	-552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	639.347917803757	2488	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTACTCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-32	NA	20016572	20045336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20022614_20022796_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.267	chr8	+	4613	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	107	-197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	580.456716732609	2492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20016572	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035868_20036160_20039783_20039904_20041811
ES.32573.268	chr8	+	5149	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	111	335	intron_retention	FALSE	canonical	3	882	junction_1	265.429369136123	2493	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTCAACGTTAGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	20016576	20046223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.269	chr8	+	723	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	111	24337	111	-14727	5prime_fragment	FALSE	canonical	3	882	junction_1	0	2434	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACGCATCCAGTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	20016576	20031161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20016689_20030550
ES.32573.27	chr8	+	9232	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-96	-775	intron_retention	FALSE	canonical	3	1220	junction_1	108.676891134531	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834665	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20036160_20039783_20039904_20041811
ES.32573.270	chr8	+	4942	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	114	-24367	mono-exon	FALSE	NA	NA	NA	NA	NA	2364	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGTCTTTCTGAA	NA	False	NA	NA	False	GATAAA	-37	NA	20016579	20021521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016600_20021500
ES.32573.271	chr8	+	3739	4	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	114	-773	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	550.009898900819	2487	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAATATAAATAGGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	20016579	20045115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20030550_20030757_20039783_20039904_20041811
ES.32573.272	chr8	+	6259	3	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	124	-244	intron_retention	FALSE	canonical	0	0	junction_1	743	2491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAATTTGCTGGGATTC	NA	False	NA	NA	False	AATAAA	-21	NA	20016589	20045644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20016689_20035860_20036160_20039783
ES.32573.273	chr8	+	4182	6	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	193	-775	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	634.400693568347	2487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	20016658	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20016689_20017517_20017576_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.274	chr8	+	3743	2	Antisense	novelGene_ENSMUSG00000110637.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	20022536	20153564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_20025980_20153264
ES.32573.275	chr8	+	3384	2	Intergenic	novelGene_26573	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2036	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGACAAGGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	20022886	20026314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20026170_20026213
ES.32573.276	chr8	+	4114	4	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-2317	-2741	at_least_one_novel_splicesite	FALSE	canonical	3	906	junction_1	246.84858156818	2135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20028397	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.277	chr8	+	4153	3	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-1483	-760	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40	2150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20029231	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20030748_20035860_20038399_20045029
ES.32573.278	chr8	+	4468	5	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-362	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	567.789298507818	2154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTTGAGAAATTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	20030352	20045636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20030757_20035860_20036156_20039783_20039904_20041811_20042916_20043091
ES.32573.279	chr8	+	4163	4	NNC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-169	-544	at_least_one_novel_splicesite	FALSE	canonical	3	906	junction_1	246.84858156818	2151	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTGTGGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	20030545	20045344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.28	chr8	+	3326	7	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-96	3200	multi-exon	FALSE	canonical	0	0	junction_4	450.546859074861	2535	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGCTGAAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	19834665	20058698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20039783_20039904_20052877_20053142_20055368_20055421_20055523_20055604_20056462
ES.32573.280	chr8	+	4697	4	ISM	ENSMUSG00000071793.13	ENSMUST00000139264.2	948	5	-169	177	-169	-177	5prime_fragment	FALSE	canonical	3	606	junction_1	385.747182606547	2155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20030545	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.281	chr8	+	8321	3	NIC	ENSMUSG00000071793.13	novel	948	5	NA	NA	-169	-177	intron_retention	FALSE	canonical	3	606	junction_1	369	2155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20030545	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20030924_20035860_20039904_20041811
ES.32573.282	chr8	+	666	2	ISM	ENSMUSG00000071793.13	ENSMUST00000139264.2	948	5	8935	3665	8935	-3665	internal_fragment	FALSE	canonical	3	1344	junction_1	0	2112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTGAGTCTTGAGATA	NA	False	NA	NA	False	ATTAAA	-23	NA	20039649	20042223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20039904_20041811
ES.32573.283	chr8	+	181	1	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	37598	1254	23349	-1254	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACCAAAAA	NA	False	NA	NA	False	AATAGA	-12	NA	20054063	20054244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20054100_20054200
ES.32573.284	chr8	+	3143	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	23674	6534	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.53962995154008	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGTAATTGTCCCACT	NA	False	NA	NA	False	NA	NA	NA	20054388	20062032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20054501_20055368_20055417_20055523_20055604_20056462_20057649_20060315
ES.32573.285	chr8	+	178	1	Intergenic	novelGene_26575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20071293	20071471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20071300_20071500
ES.32573.286	chr8	+	7048	1	Intergenic	novelGene_26576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	20119955	20127003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20120000_20127000
ES.32573.287	chr8	+	1452	6	NNC	ENSMUSG00000071796.14	novel	936	6	NA	NA	-23861	-3742	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	509.929642205667	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGACCACTGCTCAGCG	NA	False	NA	NA	False	AGTAAA	-20	NA	20119986	20169252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20120262_20143455_20143649_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.288	chr8	+	4886	1	Intergenic	novelGene_26577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGTGAGGCAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	20119986	20124872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20120000_20124900
ES.32573.289	chr8	+	4452	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-23860	-574	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	509.882888514608	234	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	20119987	20172420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20120262_20143455_20143649_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.29	chr8	+	1395	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-96	-3603	multi-exon	FALSE	canonical	3	16	junction_2	622.058829613406	2474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCTCCTGTCTCAGTG	NA	False	NA	NA	False	CATAAA	-16	NA	19834665	20042285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030856_20035860_20036156_20039783_20039904_20041811
ES.32573.290	chr8	+	5062	1	Intergenic	novelGene_26578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATTGTAATTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	20119987	20125049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20120000_20125000
ES.32573.291	chr8	+	7217	6	NNC	ENSMUSG00000071796.14	novel	936	6	NA	NA	-23860	-3741	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	517.580911549103	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACCACTGCTCAGCGA	NA	False	NA	NA	False	AGTAAA	-21	NA	20119987	20169253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20126027_20143455_20143649_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.292	chr8	+	7063	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-23860	-3728	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	517.960770715312	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGAGAGCCTCATCTTT	NA	False	NA	NA	False	AGTAAA	-34	NA	20119987	20169266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20126027_20143455_20143649_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.293	chr8	+	1296	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-23856	-3726	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	509.882888514608	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20119991	20169268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20120262_20143455_20143649_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.294	chr8	+	4378	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-91	-24860	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	7097	False	NA	NA	False	NA	NA	NA	20143756	20148134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20143800_20148100
ES.32573.295	chr8	+	4170	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-91	-589	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	7097	False	NA	NA	False	AATAAA	-7	NA	20143756	20172405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.296	chr8	+	5041	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-91	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	522.264530673872	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7097	False	NA	NA	False	AATAAA	-14	NA	20143756	20173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.297	chr8	+	1343	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-89	3822	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	181.407166341355	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGGTTTTGTTTT	7099	False	NA	NA	False	AATAAA	-16	NA	20143758	20182489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20167037_20167158_20173024_20173282_20179856_20180121_20182358
ES.32573.298	chr8	+	1351	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-89	3822	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	264.691971922082	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGGTTTTGTTTT	7099	False	NA	NA	False	AATAAA	-16	NA	20143758	20182489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20163405_20173024_20173282_20179856_20180121_20182358
ES.32573.299	chr8	+	4314	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-21	-375	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	7167	False	NA	NA	False	AATAAA	-23	NA	20143826	20172619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.3	chr8	+	4823	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-176	-160	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCGTGTACCAGATGTC	NA	False	NA	NA	False	AATAAA	-31	NA	19834585	20045728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.30	chr8	+	6043	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-94	-766	intron_retention	FALSE	canonical	3	906	junction_2	237.054142901293	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	19834667	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783
ES.32573.300	chr8	+	4697	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-20	9	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7168	False	NA	NA	False	AATAAA	-14	NA	20143827	20173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.301	chr8	+	4215	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-15	-574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	522.903203279536	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	7173	False	NA	NA	False	AATAAA	-22	NA	20143832	20172420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.302	chr8	+	4274	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-13	-574	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	363.919891597038	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	7175	False	NA	NA	False	AATAAA	-22	NA	20143834	20172420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.303	chr8	+	4173	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-13	-574	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	521.811996795781	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	7175	False	NA	NA	False	AATAAA	-22	NA	20143834	20172420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20153924_20153991_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.304	chr8	+	9748	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-12	-19411	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGCAATTATGTAGAT	7176	False	NA	NA	False	NA	NA	NA	20143835	20153583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20143800_20153600
ES.32573.305	chr8	+	1008	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-11	3822	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	195.456516903377	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGGTTTTGTTTT	7177	False	NA	NA	False	AATAAA	-16	NA	20143836	20182489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20167037_20167158_20179856_20180121_20182358
ES.32573.306	chr8	+	857	3	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-9	-5591	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	215	170	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTGTGGATCCATAT	7179	False	NA	NA	False	ATTAAA	-19	NA	20143838	20167403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20167037
ES.32573.307	chr8	+	4458	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-385	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	363.919891597038	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTTAAGCAGGGGG	7180	False	NA	NA	False	AATAAA	-13	NA	20143839	20172609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.309	chr8	+	1331	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	4422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	184.296934320677	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	7180	False	NA	NA	False	NA	NA	NA	20143839	20183089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20167037_20167158_20179856_20180121_20182358_20182407_20182513
ES.32573.31	chr8	+	4234	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-94	-766	multi-exon	FALSE	canonical	3	16	junction_2	585.256140506018	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	19834667	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32573.310	chr8	+	8294	4	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-11	intron_retention	FALSE	canonical	3	474	junction_1	149.564553138622	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	7180	False	NA	NA	False	AATGAA	-22	NA	20143839	20172983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20167158_20169060
ES.32573.311	chr8	+	3716	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-2595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	365.063830035242	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTATGAGTGTGT	7180	False	NA	NA	False	ATTAAA	-23	NA	20143839	20170399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802_20158009_20163109_20163409_20165508_20167158_20169060
ES.32573.312	chr8	+	4775	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-68	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	363.919891597038	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCCTTTGAGAAATTT	7180	False	NA	NA	False	AATAAA	-11	NA	20143839	20172926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20163109_20163409_20167037_20167158_20169060
ES.32573.313	chr8	+	5152	3	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-10263	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	162	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTTAAATCTTTTTGA	7180	False	NA	NA	False	AATAAA	-27	NA	20143839	20162731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802
ES.32573.314	chr8	+	3042	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-8	-589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	455.123895219752	199	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	7180	False	NA	NA	False	AATAAA	-7	NA	20143839	20172405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20163109_20163409_20167037_20167158_20169060_20170993_20172204
ES.32573.316	chr8	+	947	5	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-3	-3724	at_least_one_novel_splicesite	FALSE	canonical	3	474	junction_1	337.871647227168	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCATCTTTTCTT	7185	False	NA	NA	False	AGTAAA	-38	NA	20143844	20169270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.317	chr8	+	4786	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	522.903203279536	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7185	False	NA	NA	False	AATAAA	-14	NA	20143844	20173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802_20158009_20163109_20163409_20167037_20167158_20169060
ES.32573.318	chr8	+	4884	6	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-2	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	564.72740326639	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7186	False	NA	NA	False	AATAAA	-14	NA	20143845	20173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20144003_20152180_20152241_20157802_20158108_20163109_20163409_20167037_20167158_20169060
ES.32573.319	chr8	+	10378	3	NNC	ENSMUSG00000071796.14	novel	4659	5	NA	NA	-2	9	intron_retention	FALSE	canonical	3	474	junction_1	10	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	7186	False	NA	NA	False	AATAAA	-14	NA	20143845	20173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20143957_20157802_20158176_20163109
ES.32573.32	chr8	+	6134	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-94	-3871	intron_retention	FALSE	canonical	3	1220	junction_1	108.676891134531	2470	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGAGAGCCTCATCTTT	NA	False	NA	NA	False	AGTAAA	-34	NA	19834667	20042017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20036160_20039783_20039904_20041811
ES.32573.320	chr8	+	5739	1	Intergenic	novelGene_26579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	20147192	20152931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20147200_20152900
ES.32573.321	chr8	+	3906	2	Intergenic	novelGene_26580	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATTATGTAGATACTGA	NA	False	NA	NA	False	NA	NA	NA	20148743	20153588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20149935_20150873
ES.32573.322	chr8	+	4471	2	Intergenic	novelGene_26581	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGACAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	20148747	20153555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20151767_20152103
ES.32573.323	chr8	+	3644	1	Intergenic	novelGene_26582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	828	False	NA	NA	False	NA	NA	NA	20149833	20153477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20149800_20153500
ES.32573.324	chr8	+	6809	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	17664	3819	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAACAGTGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	20175677	20182486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20175700_20182500
ES.32573.325	chr8	+	218	1	Intergenic	novelGene_26584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTTTATTGACTGGAA	NA	False	NA	NA	False	NA	NA	NA	20176213	20176431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20176200_20176400
ES.32573.326	chr8	+	895	2	Intergenic	novelGene_26585	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGAATTCCAGAAATTT	NA	False	NA	NA	False	AATAAA	-31	NA	20176906	20178572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20177093_20177863
ES.32573.327	chr8	+	3598	1	Intergenic	novelGene_26586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAAGCTCTGCCTGCTC	NA	False	NA	NA	False	NA	NA	NA	20179532	20183130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20179500_20183100
ES.32573.34	chr8	+	1087	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-86	-3674	multi-exon	FALSE	canonical	3	45	junction_2	585.320614895992	2474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACCAGAATATCTGAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	19834675	20042214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20039783_20039904_20041811
ES.32573.35	chr8	+	4536	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-84	-775	multi-exon	FALSE	canonical	0	0	junction_1	635.480164914689	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834677	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20017733_20017987_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.36	chr8	+	1293	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-83	-3597	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2474	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCTCAGTGTTCTTA	NA	False	NA	NA	False	CATAAA	-22	NA	19834678	20042291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.37	chr8	+	4650	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-29	-177	multi-exon	FALSE	canonical	3	80	junction_2	557.921813518704	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834732	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.38	chr8	+	6143	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-27	-766	intron_retention	FALSE	canonical	3	606	junction_2	368.50327904466	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	19834734	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783
ES.32573.39	chr8	+	3472	8	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-27	3200	multi-exon	FALSE	canonical	1	1	junction_4	575.695781340337	2535	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGCTGAAGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	19834734	20058698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20039783_20039904_20041811_20041980_20045732_20045999_20052877_20053142_20055523_20055604_20056462
ES.32573.4	chr8	+	4982	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-165	-157	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGTACCAGATGTCTGT	NA	False	NA	NA	False	AATAAA	-34	NA	19834596	20045731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.40	chr8	+	4293	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-26	-697	multi-exon	FALSE	non_canonical	0	0	junction_1	597.964045741882	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGAGCATTCCATGC	NA	False	NA	NA	False	TATAAA	-26	NA	19834735	20045191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.41	chr8	+	1912	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-26	-2741	multi-exon	FALSE	non_canonical	0	0	junction_5	568.856256008493	2486	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834735	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20039783_20039904_20041811_20042916_20043091
ES.32573.42	chr8	+	5172	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	340	intron_retention	FALSE	canonical	3	906	junction_2	214.058403245469	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAACGTTAGGGCAGGAA	NA	False	NA	NA	False	AATAAA	-20	NA	19834736	20046228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.43	chr8	+	320	2	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-15148	multi-exon	FALSE	canonical	3	1220	junction_1	0	2441	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGGTATGCCTGGTAT	NA	False	NA	NA	False	AATGAA	-22	NA	19834736	20030740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550
ES.32573.44	chr8	+	4835	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-177	multi-exon	FALSE	canonical	0	0	junction_1	597.964045741882	2506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834736	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834880_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.45	chr8	+	4290	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-775	multi-exon	FALSE	canonical	0	0	junction_2	630.347332825324	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834736	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_19849538_19849605_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.46	chr8	+	4057	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-25	-766	multi-exon	FALSE	non_canonical	0	0	junction_5	553.985703786659	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGGTGTGGCACCA	NA	False	NA	NA	False	AATAAA	-16	NA	19834736	20045122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.47	chr8	+	4441	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	-775	multi-exon	FALSE	canonical	2	7	junction_5	605.081349902639	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834737	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.48	chr8	+	4134	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	-565	multi-exon	FALSE	canonical	3	45	junction_2	585.320614895992	2502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGCAGGGGGTAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	19834737	20045323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20039783_20039904_20041811
ES.32573.49	chr8	+	4300	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-24	185977	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834737	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834944_20016755
ES.32573.5	chr8	+	4423	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-160	-544	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTGTGGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	19834601	20045344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.50	chr8	+	4251	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	-760	multi-exon	FALSE	canonical	0	0	junction_1	597.964045741882	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834737	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834880_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.51	chr8	+	3895	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	-760	multi-exon	FALSE	non_canonical	0	0	junction_5	531.296677949336	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834737	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.52	chr8	+	4301	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-24	185977	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834737	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834950_20016760
ES.32573.54	chr8	+	3036	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-24	349	intron_retention	FALSE	canonical	1	1	junction_3	570.908243260002	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCAGGAAGGGGATGCC	NA	False	NA	NA	False	AATAAA	-29	NA	19834737	20046237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20039783_20041980_20045732
ES.32573.55	chr8	+	8010	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-23	-775	intron_retention	FALSE	non_canonical	0	0	junction_3	498.066483737083	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834738	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20037903
ES.32573.59	chr8	+	4254	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-23	-566	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAGGGGGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	19834738	20045322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.6	chr8	+	4253	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-143	-697	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGAGCATTCCATGC	NA	False	NA	NA	False	TATAAA	-26	NA	19834618	20045191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.60	chr8	+	4298	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-22	185977	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834739	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834990_20016801
ES.32573.61	chr8	+	3493	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-20	2544	multi-exon	FALSE	canonical	3	77	junction_3	467.057693319454	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGGAGAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	19834741	20048432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036156_20045732
ES.32573.62	chr8	+	4056	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-19	-760	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834742	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.63	chr8	+	2252	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-19	-2741	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2486	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	19834742	20043147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.64	chr8	+	3865	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	-775	multi-exon	FALSE	non_canonical	0	0	junction_5	647.757979495429	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834743	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.65	chr8	+	4638	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	-177	multi-exon	FALSE	non_canonical	0	0	junction_1	580.074133193336	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834743	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.66	chr8	+	2966	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	-760	multi-exon	FALSE	non_canonical	0	0	junction_3	517.239682244981	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834743	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20038399_20045029
ES.32573.67	chr8	+	3324	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	2544	multi-exon	FALSE	canonical	3	77	junction_3	482.157881012249	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGGAGAGAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	19834743	20048432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036156_20045732
ES.32573.68	chr8	+	5017	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-18	-197	multi-exon	FALSE	canonical	0	0	junction_5	606.616188376143	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	19834743	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040987_20041811
ES.32573.7	chr8	+	4409	2	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	4009	6	NA	NA	-143	-25039	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	19834618	20020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834819_20016640
ES.32573.71	chr8	+	6421	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	-179	intron_retention	FALSE	canonical	3	45	junction_2	587.5	2506	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGATGTCTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	19834744	20045709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20039783
ES.32573.72	chr8	+	4625	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	3682	multi-exon	FALSE	canonical	0	0	junction_1	269.362622169859	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTGCAGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	19834744	20049570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030553_20030924_20035860_20036156_20045732
ES.32573.73	chr8	+	4097	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	3239	multi-exon	FALSE	non_canonical	0	0	junction_5	615.892198359421	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	19834744	20049127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20045732_20047386_20047430
ES.32573.75	chr8	+	4453	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	-564	multi-exon	FALSE	non_canonical	0	0	junction_3	584.361531930363	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGCAGGGGGTAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	19834744	20045324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20037903_20038097_20039783_20039904_20041811
ES.32573.76	chr8	+	4089	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	-559	multi-exon	FALSE	non_canonical	0	0	junction_5	531.296677949336	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGGGTAAATTTACTCT	NA	False	NA	NA	False	AATAAA	-25	NA	19834744	20045329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.77	chr8	+	4873	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-17	-177	multi-exon	FALSE	canonical	0	0	junction_2	661.868869187848	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834744	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030890_20035325_20035419_20035860_20036160_20039783_20039904_20041811
ES.32573.78	chr8	+	4642	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-14	-564	multi-exon	FALSE	canonical	2	7	junction_5	605.081349902639	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGCAGGGGGTAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	19834747	20045324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20040764_20040983_20041811
ES.32573.79	chr8	+	3016	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-775	multi-exon	FALSE	non_canonical	0	0	junction_1	635.696279680792	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834748	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20043727_20044912
ES.32573.8	chr8	+	2029	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-132	-3077	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2482	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGCTAGTGCTAATTT	NA	False	NA	NA	False	AATACA	-16	NA	19834629	20042811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.80	chr8	+	4636	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-197	multi-exon	FALSE	canonical	0	0	junction_1	580.074133193336	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	19834748	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834880_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.81	chr8	+	1743	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-3077	multi-exon	FALSE	canonical	3	906	junction_2	214.058403245469	2482	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGCTAGTGCTAATTT	NA	False	NA	NA	False	AATACA	-16	NA	19834748	20042811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.82	chr8	+	791	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-9561	multi-exon	FALSE	canonical	3	906	junction_2	157	2464	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAAATATCATGATTAT	NA	False	NA	NA	False	NA	NA	NA	19834748	20036327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860
ES.32573.83	chr8	+	5293	7	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-2320	intron_retention	FALSE	non_canonical	0	0	junction_1	646.508679154597	2509	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTCTGTTCACAGCAG	NA	False	NA	NA	False	NA	NA	NA	19834748	20053178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20045999_20050589_20050662_20052877
ES.32573.84	chr8	+	1398	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	332	multi-exon	FALSE	canonical	2	8	junction_4	571.903838070702	2507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGGCATTCAACGTTAG	NA	False	NA	NA	False	AATAAA	-12	NA	19834748	20046220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20045732
ES.32573.85	chr8	+	6551	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-177	intron_retention	FALSE	canonical	3	906	junction_2	237.054142901293	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834748	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783
ES.32573.86	chr8	+	4375	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-13	-544	multi-exon	FALSE	canonical	3	16	junction_2	585.256140506018	2502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTGTGGCTGCTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	19834748	20045344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32573.88	chr8	+	4231	2	Genic_Genomic	ENSMUSG00000110669.2	novel	111	1	NA	NA	-12	185920	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAAAAACCGA	NA	False	NA	NA	False	AATGAA	-4	NA	19834749	20020792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_19834938_20016749
ES.32573.89	chr8	+	2860	4	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-3867	intron_retention	FALSE	canonical	3	906	junction_2	237.054142901293	2470	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCATCTTTTCTT	NA	False	NA	NA	False	AGTAAA	-38	NA	19834749	20042021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783
ES.32573.9	chr8	+	4396	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-126	-704	multi-exon	FALSE	canonical	3	606	junction_2	335.627770007191	2501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAAGCTTCCAGAGCAT	NA	False	NA	NA	False	TATAAA	-19	NA	19834635	20045184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.91	chr8	+	6778	3	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	350	intron_retention	FALSE	canonical	3	17	junction_2	601.5	2507	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGGAAGGGGATGCCT	NA	False	NA	NA	False	AATAAA	-30	NA	19834749	20046238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20039783
ES.32573.93	chr8	+	4437	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-197	multi-exon	FALSE	non_canonical	0	0	junction_5	647.757979495429	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	19834749	20045691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030748_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.94	chr8	+	4072	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-760	multi-exon	FALSE	canonical	0	0	junction_1	580.074133193336	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834749	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834880_20030550_20030757_20035860_20036160_20039783_20039904_20041811
ES.32573.96	chr8	+	4040	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-760	multi-exon	FALSE	non_canonical	0	0	junction_1	689.910682624932	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCACCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19834749	20045128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030748_20035860_20036160_20039783_20039904_20041811
ES.32573.97	chr8	+	4466	6	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-177	multi-exon	FALSE	non_canonical	0	0	junction_5	531.296677949336	2506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	19834749	20045711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834867_20030550_20030757_20035860_20036160_20039783_20039904_20041811_20042916_20043091
ES.32573.98	chr8	+	4417	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-559	multi-exon	FALSE	non_canonical	0	0	junction_1	597.964045741882	2502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGGGTAAATTTACTCT	NA	False	NA	NA	False	AATAAA	-25	NA	19834749	20045329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030924_20035860_20036160_20039783_20039904_20041811
ES.32573.99	chr8	+	4133	5	Fusion	ENSMUSG00000110669.2_ENSMUSG00000071793.13	novel	948	5	NA	NA	-12	-775	multi-exon	FALSE	non_canonical	0	0	junction_1	705.311810478174	2501	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	19834749	20045113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_19834857_20030550_20030856_20035860_20036160_20039783_20039904_20041811
ES.32574.1	chr8	-	3795	5	Antisense	novelGene_ENSMUSG00000071793.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	20044558	20005598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20005616_20030145_20030754_20035856_20036158_20039781_20039902_20041809
ES.32574.2	chr8	-	5400	4	Antisense	novelGene_ENSMUSG00000071793.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAAACCGCTCGGGCGG	NA	False	NA	NA	False	NA	NA	NA	20044558	20016568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20016683_20030544_20030754_20035856_20036159_20039783
ES.32574.3	chr8	-	3283	1	Antisense	novelGene_ENSMUSG00000071793.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAGAATTCCATAACCAT	NA	False	NA	NA	False	NA	NA	NA	20033423	20030140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20030100_20033400
ES.32574.4	chr8	-	182	1	Intergenic	novelGene_26574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	20041428	20041246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20041200_20041400
ES.32575.1	chr8	-	179	1	Intergenic	novelGene_26583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATGTACTG	NA	False	NA	NA	False	NA	NA	NA	20161215	20161036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20161000_20161200
ES.32576.1	chr8	-	666	4	Antisense	novelGene_ENSMUSG00000071796.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.88561808316413	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTTTACAGAATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	20173750	20166978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20167084_20167458_20167588_20172805_20172906_20173418
ES.32577.1	chr8	-	178	1	Intergenic	novelGene_26587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATTTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	20526194	20526016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20526000_20526200
ES.32578.1	chr8	-	174	1	Intergenic	novelGene_26588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATATATCTAATAG	NA	False	NA	NA	False	NA	NA	NA	20537178	20537004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20537000_20537200
ES.32579.1	chr8	+	3400	6	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21101	9477	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	12.4354332453679	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGAAGTTTCTTCAAC	5288	False	NA	14	True	NA	NA	NA	20555598	20593814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008_20588273_20590632_20590713_20591573
ES.32579.10	chr8	+	3930	4	Fusion	ENSMUSG00000110649.2_ENSMUSG00000096401.3	novel	422	2	NA	NA	-84	-726	multi-exon	FALSE	non_canonical	0	0	junction_1	547.432999451886	1217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGAGCATTCCATGC	8814	False	NA	NA	False	TATAAA	-26	NA	20576615	20726540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20576736_20717197_20717497_20721120_20721241_20723149
ES.32579.100	chr8	+	3909	4	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-196	-808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	459.774582449559	1070	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20711906	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20712098_20717197_20717497_20721120_20721241_20723159
ES.32579.101	chr8	+	3922	5	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-193	-793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	535.025466683596	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20711909	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20712265_20717197_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.102	chr8	+	1698	5	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-122	-2779	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	496.253463463984	996	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20711980	20724487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20712098_20717197_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.103	chr8	+	3728	3	NIC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-122	-793	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	599	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20711980	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20712265_20721120_20721241_20723149
ES.32579.104	chr8	+	8218	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	620	-793	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20712722	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149
ES.32579.105	chr8	+	6590	2	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	1127	-808	at_least_one_novel_splicesite	FALSE	non_canonical	3	58	junction_1	0	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20713229	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20719736_20726374
ES.32579.106	chr8	+	7802	2	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	3532	-206	intron_retention	FALSE	canonical	3	1117	junction_1	0	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20715634	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120
ES.32579.107	chr8	+	6649	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	3915	-799	intron_retention	FALSE	non_canonical	0	0	junction_2	558.5	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	20716017	20726467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20724255_20724431
ES.32579.108	chr8	+	1038	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	4684	-3909	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	856	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20716786	20723357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149
ES.32579.109	chr8	+	3947	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5094	-590	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	20717196	20726676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149
ES.32579.11	chr8	+	3824	4	Fusion	ENSMUSG00000110649.2_ENSMUSG00000096401.3	novel	422	2	NA	NA	-48	-795	multi-exon	FALSE	non_canonical	0	0	junction_1	547.432999451886	1217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTACGTGTGGCACCA	8850	False	NA	NA	False	AATAAA	-20	NA	20576651	20726471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20576727_20717189_20717497_20721120_20721241_20723149
ES.32579.110	chr8	+	1661	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5191	-2779	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20717293	20724487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149
ES.32579.112	chr8	+	1880	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5229	-2522	at_least_one_novel_splicesite	FALSE	canonical	3	1117	junction_1	42	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGGTCACTAATGTT	NA	False	NA	NA	False	NA	NA	NA	20717331	20724744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149
ES.32579.113	chr8	+	3608	4	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5257	-590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	547.432999451886	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	20717359	20726676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.114	chr8	+	2202	3	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	5312	-3647	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	594	899	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAACGTTCTCCTGTCTC	NA	False	NA	NA	False	CATAAA	-12	NA	20717414	20723619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20717497_20719590_20721241_20723149
ES.32579.115	chr8	+	4732	2	ISM	ENSMUSG00000096401.3	ENSMUST00000096485.6	930	5	8317	206	8317	-206	internal_fragment	FALSE	canonical	3	1201	junction_1	0	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20720419	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20721241_20723149
ES.32579.116	chr8	+	5712	1	NIC	ENSMUSG00000096401.3	novel	930	5	NA	NA	8469	-983	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1070	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCCCTTACCATACAA	NA	False	NA	NA	False	NA	NA	NA	20720571	20726283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20720600_20726300
ES.32579.117	chr8	+	2839	2	ISM	ENSMUSG00000096401.3	ENSMUST00000096485.6	930	5	9016	1400	9016	-1400	internal_fragment	FALSE	canonical	3	1201	junction_1	0	1067	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATGCCGTTTACATGCC	NA	False	NA	NA	False	NA	NA	NA	20721118	20725866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_20721241_20723149
ES.32579.118	chr8	+	5895	1	Genic_Genomic	ENSMUSG00000096401.3	novel	NA	NA	NA	NA	9557	288	mono-exon	FALSE	NA	NA	NA	NA	NA	1071	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGCATTCAAAGTTAG	NA	False	NA	NA	False	AATAAA	-12	NA	20721659	20727554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20721700_20727600
ES.32579.119	chr8	+	990	1	NIC	ENSMUSG00000096401.3	novel	930	5	NA	NA	11057	-3117	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGCTAGTGCTAATTT	NA	False	NA	NA	False	AATACA	-16	NA	20723159	20724149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_20723200_20724100
ES.32579.12	chr8	+	3763	4	Fusion	ENSMUSG00000110649.2_ENSMUSG00000096401.3	novel	422	2	NA	NA	187	-808	multi-exon	FALSE	canonical	3	157	junction_1	473.590540446069	1216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	9085	False	NA	NA	False	AATAAA	-7	NA	20576886	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20576922_20717197_20717497_20721120_20721241_20723149
ES.32579.120	chr8	+	7029	2	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	11313	3760	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	1068	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATAACAGGTTAATTG	NA	False	NA	NA	False	NA	NA	NA	20723415	20731026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20727886_20728467
ES.32579.121	chr8	+	2055	2	Intergenic	novelGene_26599	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20724365	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20725024_20725061
ES.32579.122	chr8	+	1762	2	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	15022	3772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATTGAACTGGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	20727124	20731038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20727333_20729484
ES.32579.123	chr8	+	111	1	Intergenic	novelGene_26600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCCCTCTTCTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	20730812	20730923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20730800_20730900
ES.32579.13	chr8	+	6731	1	Antisense	novelGene_ENSMUSG00000110589.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTCTTTTGCTCATTG	NA	False	NA	NA	False	AATAAA	-19	NA	20592546	20599277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_20592500_20599300
ES.32579.14	chr8	+	5166	1	Antisense	novelGene_ENSMUSG00000110589.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTCGTGTTGGCTAAT	NA	False	NA	NA	False	AATATA	-21	NA	20593520	20598686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_20593500_20598700
ES.32579.15	chr8	+	5191	1	Intergenic	novelGene_26592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAACCAAATAT	NA	False	NA	NA	False	NA	NA	NA	20599142	20604333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20599100_20604300
ES.32579.16	chr8	+	6869	6	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-17107	-188	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	515.827335452475	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTGTACCAGATGTCT	NA	False	NA	NA	False	AATAAA	-32	NA	20694995	20727078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20696089_20696559_20697782_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.17	chr8	+	4177	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-175	-808	multi-exon	TRUE	non_canonical	0	0	junction_5	443.975224533982	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697809	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149_20725025_20725061
ES.32579.18	chr8	+	4417	1	FSM	ENSMUSG00000110458.2	ENSMUST00000211922.2	111	1	-155	-4151	-155	4151	mono-exon	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20697829	20702246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_20697800_20702200
ES.32579.19	chr8	+	4255	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-134	-726	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGAGCATTCCATGC	NA	False	NA	NA	False	TATAAA	-26	NA	20697850	20726540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.20	chr8	+	4792	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-133	-188	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTGTACCAGATGTCT	NA	False	NA	NA	False	AATAAA	-32	NA	20697851	20727078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.21	chr8	+	4716	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-132	-226	multi-exon	FALSE	non_canonical	0	0	junction_5	443.975224533982	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20697852	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149_20725025_20725061
ES.32579.22	chr8	+	4569	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-131	-576	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTCTTCTGTGGCTGCT	NA	False	NA	NA	False	AATAAA	-37	NA	20697853	20726690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ES.32579.23	chr8	+	6623	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-130	-226	intron_retention	FALSE	non_canonical	0	0	junction_4	403.164048496391	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20697854	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20725025_20725061
ES.32579.24	chr8	+	3069	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-127	-799	multi-exon	FALSE	non_canonical	3	58	junction_3	249.408633905618	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	20697857	20726467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20719736_20726374
ES.32579.25	chr8	+	3970	5	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-14245	-808	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	496.253463463984	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697857	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20697979_20711976_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.26	chr8	+	4415	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-127	-726	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCAGAGCATTCCATGC	NA	False	NA	NA	False	TATAAA	-26	NA	20697857	20726540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ES.32579.27	chr8	+	4004	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-126	-793	multi-exon	FALSE	non_canonical	0	0	junction_5	443.975224533982	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697858	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.29	chr8	+	4930	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-122	-206	multi-exon	FALSE	canonical	3	200	junction_2	399.990234255788	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697862	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ES.32579.3	chr8	+	1107	4	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21092	3972	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	4.49691252107735	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGTCTGTTAACAACAG	5297	False	NA	NA	False	NA	NA	NA	20555607	20588309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20555835_20576529_20576922_20584150_20584338_20588008
ES.32579.30	chr8	+	4393	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-118	-572	multi-exon	FALSE	canonical	3	434	junction_2	317.198183317622	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGTGGCTGCTTTTC	NA	False	NA	NA	False	AATAAA	-41	NA	20697866	20726694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.31	chr8	+	3987	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-118	-793	multi-exon	FALSE	non_canonical	0	0	junction_5	511.73493138538	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697866	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712089_20717197_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.32	chr8	+	4271	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-118	-793	multi-exon	FALSE	canonical	3	13	junction_2	471.385988336522	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697866	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712197_20717197_20717497_20721120_20721241_20723149
ES.32579.34	chr8	+	10278	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-114	-206	intron_retention	FALSE	non_canonical	0	0	junction_1	217	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697870	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698080_20711891_20712098_20717197
ES.32579.35	chr8	+	10276	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-111	-206	intron_retention	FALSE	canonical	3	37	junction_2	313	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697873	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712089_20717197
ES.32579.38	chr8	+	2988	2	Genic_Genomic	ENSMUSG00000110458.2	novel	111	1	NA	NA	-100	4151	multi-exon	FALSE	non_canonical	0	0	junction_1	0	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20697884	20702246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_20698364_20699737
ES.32579.39	chr8	+	4355	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-98	-808	multi-exon	FALSE	canonical	3	20	junction_5	413.975168337426	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697886	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20722101_20722320_20723149
ES.32579.4	chr8	+	4313	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21091	-3721	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAATATAGTGTTTTG	5298	False	NA	NA	False	AATAAA	-28	NA	20555608	20580616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20555835_20576529
ES.32579.40	chr8	+	1229	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-95	-3709	multi-exon	FALSE	canonical	3	42	junction_3	419.28212458916	983	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATATCTGAGTCTTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	20697889	20723557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717493_20721120_20721241_20723149
ES.32579.41	chr8	+	4645	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-281	multi-exon	FALSE	non_canonical	0	0	junction_1	482.037018806647	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTTGAGAAATTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	20697891	20726985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698080_20711891_20712098_20717197_20717493_20721120_20721241_20723149
ES.32579.42	chr8	+	4822	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-3909	intron_retention	FALSE	canonical	3	200	junction_2	409.03871047453	951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGAGCCTCATCTTTTC	NA	False	NA	NA	False	AGTAAA	-36	NA	20697891	20723357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20721241_20723149
ES.32579.43	chr8	+	4412	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-189	multi-exon	FALSE	canonical	0	0	junction_4	502.632258714062	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCGTGTACCAGATGTC	NA	False	NA	NA	False	AATAAA	-31	NA	20697891	20727077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20721120_20721241_20723149_20725005_20725044
ES.32579.44	chr8	+	4224	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-800	multi-exon	FALSE	non_canonical	0	0	junction_2	519.616243010166	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATATGTACGTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	20697891	20726466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20713845_20713930_20717197_20717497_20721120_20721241_20723149
ES.32579.45	chr8	+	6193	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	288	intron_retention	FALSE	non_canonical	0	0	junction_2	331.5	1166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGCATTCAAAGTTAG	NA	False	NA	NA	False	AATAAA	-12	NA	20697891	20727554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20717414_20727081
ES.32579.46	chr8	+	4008	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-593	multi-exon	TRUE	canonical	0	0	junction_4	502.632258714062	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGCAGGGGGTAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	20697891	20726673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20721120_20721241_20723149_20725005_20725044
ES.32579.47	chr8	+	4326	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-274	multi-exon	FALSE	non_canonical	0	0	junction_4	502.632258714062	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAAATTTGCTGGGATT	NA	False	NA	NA	False	AATAAA	-20	NA	20697891	20726992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20721120_20721241_20723149_20724992_20725032
ES.32579.48	chr8	+	7958	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-596	intron_retention	FALSE	non_canonical	0	0	junction_1	496.54875557861	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAGCAGGGGGTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	20697891	20726670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698080_20711891_20712098_20717197_20721241_20723149
ES.32579.49	chr8	+	4705	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-226	multi-exon	FALSE	canonical	3	37	junction_2	462.04626391737	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20697891	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712089_20717197_20717497_20721120_20721241_20723149
ES.32579.5	chr8	+	2150	1	Intergenic	novelGene_26589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTATGTTTTTCGTAT	5306	False	NA	NA	False	AATAAA	-16	NA	20555616	20557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20555600_20557800
ES.32579.50	chr8	+	4341	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-590	multi-exon	FALSE	canonical	3	37	junction_2	462.04626391737	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	20697891	20726676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712089_20717197_20717497_20721120_20721241_20723149
ES.32579.51	chr8	+	3193	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-808	multi-exon	FALSE	non_canonical	3	58	junction_3	258.318924329339	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697891	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20719736_20726374
ES.32579.52	chr8	+	4813	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-226	multi-exon	FALSE	canonical	3	13	junction_2	471.385988336522	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20697891	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712197_20717197_20717497_20721120_20721241_20723149
ES.32579.53	chr8	+	6218	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-798	intron_retention	FALSE	canonical	3	200	junction_2	374.369692505505	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTACGTGTGGCA	NA	False	NA	NA	False	AATAAA	-17	NA	20697891	20726468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120
ES.32579.54	chr8	+	3941	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-793	multi-exon	FALSE	canonical	1	2	junction_1	546.492045281133	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697891	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20717197_20717497_20721120_20721241_20723149
ES.32579.55	chr8	+	6511	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-93	-206	intron_retention	FALSE	canonical	1	3	junction_2	330	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697891	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20721120
ES.32579.56	chr8	+	4305	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-91	-588	multi-exon	FALSE	non_canonical	0	0	junction_2	481.075212414857	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGGGTAAATTTACTCT	NA	False	NA	NA	False	AATAAA	-25	NA	20697893	20726678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712094_20717197_20717493_20721120_20721241_20723149_20725025_20725061
ES.32579.57	chr8	+	4331	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-91	-597	multi-exon	FALSE	non_canonical	0	0	junction_1	496.253463463984	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTAAGCAGGGGGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	20697893	20726669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698080_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.59	chr8	+	6640	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-90	-206	intron_retention	FALSE	canonical	3	434	junction_2	283.832109999321	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697894	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120
ES.32579.6	chr8	+	4243	2	NNC	ENSMUSG00000110649.2	novel	422	2	NA	NA	-21059	-3715	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAGTGTTTTGTTTACT	5330	False	NA	NA	False	AATAAA	-34	NA	20555640	20580622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20555791_20576529
ES.32579.61	chr8	+	7935	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-90	-793	intron_retention	FALSE	canonical	3	200	junction_2	409.03871047453	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697894	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20721241_20723149
ES.32579.62	chr8	+	4522	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-90	-800	multi-exon	FALSE	canonical	3	20	junction_5	426.361067641031	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATATGTACGTGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	20697894	20726466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120_20721241_20722101_20722320_20723149
ES.32579.64	chr8	+	4948	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-89	-206	multi-exon	FALSE	canonical	3	20	junction_5	413.975168337426	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697895	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20722101_20722320_20723149
ES.32579.65	chr8	+	6434	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-85	-574	intron_retention	FALSE	canonical	3	200	junction_2	374.369692505505	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTTCTGTGGCTGCTTT	NA	False	NA	NA	False	AATAAA	-39	NA	20697899	20726692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120
ES.32579.66	chr8	+	4007	5	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-14201	-808	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	496.253463463984	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697901	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20697970_20711886_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.67	chr8	+	4592	6	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-25	-595	multi-exon	FALSE	canonical	0	0	junction_1	540.744893642094	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAGGGGGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	20697959	20726671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20700356_20700505_20711891_20712265_20717197_20717497_20721120_20721241_20723149
ES.32579.69	chr8	+	4501	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-24	-206	multi-exon	FALSE	canonical	0	0	junction_2	476.463206869114	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697960	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20711934_20717197_20717497_20721120_20721241_20723149
ES.32579.7	chr8	+	2625	2	Intergenic	novelGene_26590	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	5696	False	NA	NA	False	NA	NA	NA	20556006	20702246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20556123_20699737
ES.32579.71	chr8	+	3944	7	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-23	-808	multi-exon	FALSE	non_canonical	0	0	junction_2	518.857532362101	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697961	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20698918_20698977_20711891_20712098_20717197_20717497_20721120_20721241_20723149_20724256_20724431
ES.32579.72	chr8	+	4458	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-23	-206	multi-exon	FALSE	canonical	1	2	junction_1	546.492045281133	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697961	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20717197_20717497_20721120_20721241_20723149
ES.32579.73	chr8	+	5174	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-20	307	intron_retention	FALSE	canonical	3	434	junction_2	317.198183317622	1166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGAAGGGGATGCCTT	NA	False	NA	NA	False	AATAAA	-31	NA	20697964	20727573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.74	chr8	+	3733	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-18	-793	multi-exon	FALSE	canonical	0	0	junction_4	502.632258714062	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697966	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20721120_20721241_20723149_20725005_20725044
ES.32579.76	chr8	+	6734	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-17	-206	intron_retention	FALSE	canonical	3	200	junction_2	374.369692505505	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697967	20727060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120
ES.32579.77	chr8	+	6492	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-17	-808	multi-exon	FALSE	canonical	0	0	junction_3	433.048784780653	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697967	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20718684_20721241_20723149
ES.32579.78	chr8	+	5980	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-17	-793	intron_retention	FALSE	canonical	3	434	junction_2	283.832109999321	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697967	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120
ES.32579.79	chr8	+	5804	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-17	-793	intron_retention	FALSE	non_canonical	0	0	junction_4	403.164048496391	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697967	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120_20724256_20724431
ES.32579.8	chr8	+	4086	1	Intergenic	novelGene_26591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	20565198	20569284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20565200_20569300
ES.32579.80	chr8	+	9604	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-17	-793	intron_retention	FALSE	canonical	3	434	junction_2	114.5	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697967	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197
ES.32579.82	chr8	+	5350	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-14	-808	multi-exon	FALSE	canonical	3	4	junction_1	494.868164261958	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697970	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20699387_20711891_20712098_20717197_20717497_20721120_20721241_20723149
ES.32579.83	chr8	+	6371	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-13	-226	intron_retention	FALSE	canonical	0	0	junction_3	311.836495619098	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	False	NA	NA	False	AATGAA	-22	NA	20697971	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20721120_20725005_20725044
ES.32579.84	chr8	+	9761	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-13	-799	intron_retention	FALSE	canonical	3	200	junction_2	231.5	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	20697971	20726467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20717197
ES.32579.85	chr8	+	936	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-12	-3919	multi-exon	FALSE	canonical	3	42	junction_3	419.28212458916	951	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGCTCAGCGAGAGCC	NA	False	NA	NA	False	AGTAAA	-26	NA	20697972	20723347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717493_20721120_20721241_20723149
ES.32579.86	chr8	+	4087	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-12	-600	multi-exon	FALSE	canonical	0	0	junction_4	502.632258714062	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTTAAGCAGGGGG	NA	False	NA	NA	False	AATAAA	-13	NA	20697972	20726666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20721120_20721241_20723149_20725005_20725044
ES.32579.87	chr8	+	4130	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-12	-597	multi-exon	FALSE	canonical	1	3	junction_2	489.926071520546	1165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTAAGCAGGGGGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	20697972	20726669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712265_20721120_20721241_20723149
ES.32579.88	chr8	+	5966	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-12	-793	intron_retention	FALSE	canonical	3	37	junction_2	442.768060676869	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	20697972	20726473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712089_20717197_20717497_20721120
ES.32579.89	chr8	+	6167	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-12	-597	intron_retention	FALSE	canonical	3	42	junction_3	256.416761455946	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTAAGCAGGGGGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	20697972	20726669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717493_20721120
ES.32579.9	chr8	+	4563	6	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-135488	-226	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	540.744893642094	1217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	8813	False	NA	NA	False	AATGAA	-22	NA	20576614	20727040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20576624_20711982_20712265_20717197_20717497_20721120_20721241_20723149_20725036_20725073
ES.32579.90	chr8	+	7674	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-11	-808	intron_retention	FALSE	canonical	3	434	junction_2	321.485095559136	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20697973	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20717197_20721241_20723149
ES.32579.91	chr8	+	4058	4	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-7	-590	multi-exon	FALSE	canonical	1	2	junction_1	546.492045281133	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	20697977	20726676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20717197_20717497_20721120_20721241_20723149
ES.32579.92	chr8	+	6189	3	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	-6	-274	intron_retention	FALSE	canonical	2	3	junction_2	330	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAAATTTGCTGGGATT	NA	False	NA	NA	False	AATAAA	-20	NA	20697978	20726992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698090_20711891_20712098_20721120
ES.32579.94	chr8	+	4179	5	Fusion	ENSMUSG00000110458.2_ENSMUSG00000096401.3	novel	930	5	NA	NA	58	-591	multi-exon	FALSE	non_canonical	0	0	junction_1	571.172642464605	1165	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGGGGGTAAATTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	20698042	20726675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_20698080_20711891_20712089_20717197_20717497_20721120_20721241_20723149
ES.32579.95	chr8	+	7369	1	Intergenic	novelGene_26593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	668	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGACAAGGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	20700325	20707694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20700300_20707700
ES.32579.96	chr8	+	2366	1	Intergenic	novelGene_26594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	20705224	20707590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20705200_20707600
ES.32579.97	chr8	+	195	1	Intergenic	novelGene_26596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGAAAAGGGAAA	NA	False	NA	NA	False	NA	NA	NA	20708170	20708365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_20708200_20708400
ES.32579.98	chr8	+	4106	4	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-216	-808	at_least_one_novel_splicesite	FALSE	canonical	3	200	junction_1	453.375733311296	1070	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	NA	False	NA	NA	False	AATAAA	-7	NA	20711886	20726458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20712265_20717197_20717497_20721120_20721241_20723149
ES.32579.99	chr8	+	4157	4	NNC	ENSMUSG00000096401.3	novel	930	5	NA	NA	-216	-590	at_least_one_novel_splicesite	FALSE	canonical	3	434	junction_1	343.48443277033	1070	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	20711886	20726676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_20712098_20717197_20717497_20721120_20721241_20723149
ES.3258.1	chr10	+	1715	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	-280	1	-280	-1	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGGCATATTCTTTC	2875	False	NA	NA	False	AATAAA	-13	NA	79500112	79504370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
ES.32580.1	chr8	-	3469	1	Antisense	novelGene_ENSMUSG00000110649.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20579534	20576065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20576100_20579500
ES.32581.1	chr8	-	3700	2	Antisense	novelGene_ENSMUSG00000110458.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATCTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	20726287	20678168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20678347_20722765
ES.32581.10	chr8	-	2882	1	Intergenic	novelGene_26598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGCTGGGTAAATTAG	NA	False	NA	NA	False	NA	NA	NA	20726287	20723405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20723400_20726300
ES.32581.2	chr8	-	1467	1	Antisense	novelGene_ENSMUSG00000110458.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAAGAGAGGATTCTTG	NA	False	NA	NA	False	NA	NA	NA	20698479	20697012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20697000_20698500
ES.32581.3	chr8	-	5123	1	Intergenic	novelGene_26595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGCTTTTAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	20710604	20705481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20705500_20710600
ES.32581.4	chr8	-	176	1	Intergenic	novelGene_26597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	20715300	20715124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_20715100_20715300
ES.32581.5	chr8	-	9433	2	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCTTAGTAGACATCT	NA	False	NA	NA	False	AAGAAA	-39	NA	20729196	20718666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20727610_20728706
ES.32581.6	chr8	-	5712	2	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCTTAGTAGACATCT	NA	False	NA	NA	False	AAGAAA	-39	NA	20726287	20718666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20721239_20723147
ES.32581.7	chr8	-	6414	2	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATAAATCTAAAA	NA	False	NA	NA	False	AAGAAA	-7	NA	20726287	20718698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20725088_20726262
ES.32581.8	chr8	-	3702	1	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTTAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20726287	20722585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20722600_20726300
ES.32581.9	chr8	-	2645	1	Antisense	novelGene_ENSMUSG00000096401.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGAGAGTCCACCCAT	NA	False	NA	NA	False	NA	NA	NA	20725903	20723258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_20723300_20725900
ES.32582.1	chr8	+	4380	1	Intergenic	novelGene_26601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	5819	False	NA	NA	False	NA	NA	NA	21090219	21094599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21090200_21094600
ES.32582.10	chr8	+	1222	6	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17366	-161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	232.4447461226	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGTGTACCAGATGTCTG	5846	False	NA	NA	False	AATAAA	-33	NA	21090246	21122626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21113050_21116684_21116805_21118696_21118865_21122391
ES.32582.11	chr8	+	4301	2	Intergenic	novelGene_26602	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	5848	False	NA	NA	False	NA	NA	NA	21090248	21094599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21090334_21090383
ES.32582.12	chr8	+	4150	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17356	-754	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	210.10771047251	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTCTTTATTTCTGAA	5856	False	NA	NA	False	AATAAA	-35	NA	21090256	21122033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21113054_21116684_21116805_21118696
ES.32582.14	chr8	+	6640	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17296	-200	intron_retention	FALSE	non_canonical	0	0	junction_3	114.554208419711	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	5916	False	NA	NA	False	AATGAA	-22	NA	21090316	21122587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21118865_21122391
ES.32582.15	chr8	+	3723	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17286	-180	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	42.8096562315871	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	5926	False	NA	NA	False	AATAAA	-14	NA	21090326	21122607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107822_21112754_21115301_21121921
ES.32582.16	chr8	+	2944	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17285	-782	at_least_one_novel_splicesite	FALSE	non_canonical	3	24	junction_2	13.9522996909709	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	5927	False	NA	NA	False	AATAAA	-7	NA	21090327	21122005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107646_21112754_21115301_21121921
ES.32582.17	chr8	+	4222	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17285	-778	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	217.448125997903	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATAAATATGTACGT	5927	False	NA	NA	False	AATAAA	-11	NA	21090327	21122009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107822_21112754_21113054_21116684_21116805_21118696
ES.32582.18	chr8	+	4712	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17244	-247	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	217.448125997903	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAATTTGCTGGGATTC	5968	False	NA	NA	False	AATAAA	-21	NA	21090368	21122540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107822_21112754_21113054_21116684_21116805_21118696
ES.32582.19	chr8	+	7407	6	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-15426	314	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	222.87790379488	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATTCAAAGTTAGGGC	7786	False	NA	NA	False	AATAAA	-15	NA	21092186	21123101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21097926_21107448_21107655_21112754_21113054_21116684_21116805_21118696_21119267_21122628
ES.32582.2	chr8	+	3276	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17390	-564	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	99.6304281945141	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGGGGTAAATTTACT	5822	False	NA	NA	False	AATAAA	-23	NA	21090222	21122223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21115301_21121921
ES.32582.20	chr8	+	4490	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-10233	-772	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	221.500987582448	217	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATGTACGTGTGGCA	NA	False	NA	NA	False	AATAAA	-17	NA	21097379	21122015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21097926_21107448_21107655_21112754_21113054_21116684_21116805_21118696
ES.32582.21	chr8	+	4594	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-9820	-3886	intron_retention	FALSE	canonical	2	3	junction_1	247.413733562944	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCGAGAGCCTCATCTT	NA	False	NA	NA	False	AGTAAA	-33	NA	21097792	21118901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21097926_21107448_21107655_21112754_21116805_21118696
ES.32582.22	chr8	+	2994	3	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	56	-571	at_least_one_novel_splicesite	FALSE	non_canonical	3	58	junction_2	41.5	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTTAAGCAGGGGGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	21107668	21122216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21107822_21112754_21115301_21121921
ES.32582.23	chr8	+	9317	1	NIC	ENSMUSG00000095403.9	novel	955	5	NA	NA	5085	-773	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	21112697	21122014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_21112700_21122000
ES.32582.24	chr8	+	7799	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	5164	10171	intron_retention	FALSE	canonical	3	18	junction_3	250.839922394077	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	21112776	21132958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21113054_21116684_21116805_21118696_21122877_21129736
ES.32582.25	chr8	+	7280	2	NIC	ENSMUSG00000095403.9	novel	955	5	NA	NA	5236	-767	intron_retention	FALSE	canonical	3	607	junction_1	0	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACGTGTGGCACCATT	NA	False	NA	NA	False	AATAAA	-22	NA	21112848	21122020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_21116805_21118696
ES.32582.26	chr8	+	3889	1	NIC	ENSMUSG00000095403.9	novel	955	5	NA	NA	11082	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCCAAATAAAAAGTAAAAT	NA	False	NA	NA	False	AATGAA	-18	NA	21118694	21122583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_21118700_21122600
ES.32582.27	chr8	+	4269	1	Genic_Genomic	ENSMUSG00000095403.9	novel	NA	NA	NA	NA	11231	325	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGGGCAGGAAGGGGAT	NA	False	NA	NA	False	AATAAA	-26	NA	21118843	21123112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_21118800_21123100
ES.32582.28	chr8	+	2129	1	Intergenic	novelGene_26604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCAGGGGGTAAATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	21120092	21122221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21120100_21122200
ES.32582.29	chr8	+	192	1	Intergenic	novelGene_26605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATATATATATATATAAA	NA	False	NA	NA	False	NA	NA	NA	21125779	21125971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21125800_21126000
ES.32582.3	chr8	+	3675	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17387	-162	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	99.6304281945141	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTGTACCAGATGTCT	5825	False	NA	NA	False	AATAAA	-32	NA	21090225	21122625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21115301_21121921
ES.32582.30	chr8	+	2929	6	Intergenic	novelGene_26606	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	8.10925397308532	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTGAAGTTTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	21129062	21135559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21129242_21129452_21129572_21129736_21130001_21132226_21132275_21132381_21132462_21133320
ES.32582.31	chr8	+	2813	4	Intergenic	novelGene_26607	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.88561808316413	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTGAAGTTTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	21129356	21135559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21129590_21129736_21130001_21132381_21132462_21133323
ES.32582.32	chr8	+	3624	1	Intergenic	novelGene_26608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTGCTCTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21129358	21132982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21129400_21133000
ES.32582.33	chr8	+	3446	2	Intergenic	novelGene_26609	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	21129365	21132958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21129590_21129736
ES.32582.34	chr8	+	181	1	Intergenic	novelGene_26610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACCAAAAA	NA	False	NA	NA	False	AATAGA	-12	NA	21130921	21131102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21130900_21131100
ES.32582.4	chr8	+	1375	6	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17387	-200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	216.584948692193	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	5825	False	NA	NA	False	AATGAA	-22	NA	21090225	21122587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107822_21112754_21113054_21116684_21116805_21118696_21118865_21122391
ES.32582.5	chr8	+	3107	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17384	-776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.551804601771	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATATGTACGTGT	5828	False	NA	NA	False	AATAAA	-13	NA	21090228	21122011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21091273_21091332_21107448_21107646_21112754_21115301_21121921
ES.32582.6	chr8	+	3228	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17384	-773	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	42.8096562315871	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	5828	False	NA	NA	False	AATAAA	-16	NA	21090228	21122014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107822_21112754_21115301_21121921
ES.32582.7	chr8	+	2893	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17384	-782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.360530832178	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	5828	False	NA	NA	False	AATAAA	-7	NA	21090228	21122005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090286_21107448_21107655_21112754_21115301_21121921
ES.32582.8	chr8	+	4738	5	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17379	-180	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	235.668198957772	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	5833	False	NA	NA	False	AATAAA	-14	NA	21090233	21122607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107646_21112754_21113054_21116684_21116805_21118696
ES.32582.9	chr8	+	3045	4	NNC	ENSMUSG00000095403.9	novel	955	5	NA	NA	-17368	-773	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_1	99.6304281945141	241	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	5844	False	NA	NA	False	AATAAA	-16	NA	21090244	21122014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21090445_21107448_21107655_21112754_21115301_21121921
ES.32583.1	chr8	-	182	1	Intergenic	novelGene_26603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	21118314	21118132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_21118100_21118300
ES.32584.1	chr8	+	178	1	Intergenic	novelGene_26611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	21148159	21148337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_21148200_21148300
ES.32585.1	chr8	+	801	3	NNC	ENSMUSG00000095294.3	novel	2522	10	NA	NA	24625	47137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAGACTGAAGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	21179559	21227856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_21179965_21226927_21227203_21227735
ES.32586.1	chr8	+	5048	4	NNC	ENSMUSG00000063362.14	novel	736	2	NA	NA	-780	9	intron_retention	FALSE	canonical	0	0	junction_1	27.1825107171668	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGGTGTTGCTTGTA	NA	False	NA	14	True	NA	NA	NA	22549956	22561652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550086_22551901_22552133_22555015_22555948_22557896
ES.32586.10	chr8	+	4941	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	27.1825107171668	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGGCTCCCTTTGGTG	NA	False	NA	5	True	NA	NA	NA	22550734	22561643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550766_22551901_22552133_22555015_22555948_22557896
ES.32586.11	chr8	+	1023	3	NNC	ENSMUSG00000063362.14	novel	4833	4	NA	NA	-1	415	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGAATTACTTGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	22550735	22555878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550787_22551901_22552137_22555141
ES.32586.12	chr8	+	4852	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-1	109	-1	-109	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCCTTTCTTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	22550735	22561534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
ES.32586.14	chr8	+	4724	3	NIC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	32.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGGCTCCCTTTGG	NA	False	NA	3	True	NA	NA	NA	22550739	22561641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22550787_22555015_22555948_22557896
ES.32586.15	chr8	+	4831	4	FSM	ENSMUSG00000063362.14	ENSMUST00000110737.3	4833	4	2	0	2	0	multi-exon	FALSE	canonical	0	0	junction_2	31.1234102672999	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGGCTCCCTTTGGTG	NA	False	NA	5	True	NA	NA	NA	22550739	22561643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22550787_22551901_22552133_22555141_22555948_22557896
ES.32586.16	chr8	+	6048	3	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	10	-2	intron_retention	FALSE	canonical	3	51	junction_1	7	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCTGGCTCCCTTTGG	NA	False	NA	3	True	NA	NA	NA	22550765	22561641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22552137_22555015_22555948_22557896
ES.32586.17	chr8	+	5088	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	13	0	intron_retention	FALSE	canonical	3	5	junction_1	24.9443825784929	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGGCTCCCTTTGGTG	NA	False	NA	5	True	NA	NA	NA	22550768	22561643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550947_22551901_22552133_22555015_22555948_22557896
ES.32586.18	chr8	+	3026	4	NNC	ENSMUSG00000063362.14	novel	736	2	NA	NA	50	-281	intron_retention	FALSE	canonical	3	5	junction_1	25.6298437156548	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTCTCTTTCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	22550805	22559614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550947_22551901_22552137_22555015_22555948_22557896
ES.32586.2	chr8	+	5005	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-32	9	intron_retention	FALSE	canonical	3	51	junction_2	7.11805216802087	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGGTGTTGCTTGTA	NA	False	NA	14	True	NA	NA	NA	22550704	22561652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
ES.32586.3	chr8	+	1642	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-16	-1590	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_2	7.11805216802087	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTCCTAAATTTATT	NA	False	NA	NA	False	NA	NA	NA	22550720	22558305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
ES.32586.4	chr8	+	3092	5	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-14	-279	intron_retention	FALSE	canonical	0	0	junction_2	32.2751839653936	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTCTTTCTTCTGGAC	NA	False	NA	NA	False	NA	NA	NA	22550722	22559616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550787_22551901_22552133_22552379_22552525_22555015_22555948_22557896
ES.32586.5	chr8	+	2945	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-14	2029	-14	-281	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTCTCTTTCTTCTGG	NA	False	NA	NA	False	NA	NA	NA	22550722	22559614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
ES.32586.7	chr8	+	2270	4	NNC	ENSMUSG00000063362.14	novel	4960	4	NA	NA	-10	-956	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_2	7.11805216802087	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTCTATGACGCTGG	NA	False	NA	NA	False	NA	NA	NA	22550726	22558939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22550787_22551901_22552137_22555015_22555948_22557896
ES.32586.8	chr8	+	1740	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	-5	3225	-5	-1477	multi-exon	FALSE	canonical	3	45	junction_2	9.93310961716756	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGTAATCTCACGTAG	NA	False	NA	NA	False	AAAAAG	-19	NA	22550731	22558418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
ES.32587.1	chr8	-	5517	22	NNC	ENSMUSG00000006567.12	novel	6505	21	NA	NA	-143	0	intron_retention	FALSE	canonical	0	0	junction_1	4.0428543384364	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCAGGTTTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	22550464	22482800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22483422_22484552_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
ES.32587.4	chr8	-	5105	13	NNC	ENSMUSG00000006567.12	novel	6505	21	NA	NA	46434	-5	intron_retention	FALSE	canonical	0	0	junction_2	4.60298815988049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAGTCAGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	22503601	22482805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22484941_22485569_22486106_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726
ES.32587.6	chr8	-	5143	22	NNC	ENSMUSG00000006567.12	novel	4044	22	NA	NA	-24	-6	intron_retention	FALSE	canonical	0	0	junction_1	4.0428543384364	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGTCAGGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22550345	22482806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22483422_22484801_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
ES.32587.7	chr8	-	6363	22	NNC	ENSMUSG00000006567.12	novel	4044	22	NA	NA	-112	-6	intron_retention	FALSE	canonical	0	0	junction_21	4.0428543384364	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGTCAGGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22550433	22482806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987_22550091_22550338
ES.32587.8	chr8	-	5954	21	FSM	ENSMUSG00000006567.12	ENSMUST00000006742.11	6505	21	-138	689	-138	-689	multi-exon	FALSE	canonical	1	1	junction_18	3.94810080924994	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTATAGGATGTCACT	NA	False	NA	NA	False	ATTAAA	-19	NA	22550459	22483489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
ES.32587.9	chr8	-	6741	12	ISM	ENSMUSG00000006567.12	ENSMUST00000006742.11	6505	21	-26	14636	-26	-12770	5prime_fragment	FALSE	canonical	1	1	junction_9	3.82250837120521	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAATTTGTGCTTTGTG	NA	False	NA	NA	False	GATAAA	-6	NA	22550347	22497436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
ES.32588.1	chr8	+	171	1	Intergenic	novelGene_26613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	22611243	22611414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22611200_22611400
ES.32589.1	chr8	-	2354	19	FSM	ENSMUSG00000037738.12	ENSMUST00000209656.2	2253	19	-111	10	-99	-10	multi-exon	FALSE	canonical	0	0	junction_2	1.07869376883042	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATAAACAGCTCTGG	NA	False	NA	NA	False	AATAAA	-7	NA	22615168	22563662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22564111_22569102_22569212_22573345_22573481_22575473_22575600_22578817_22578945_22580495_22580565_22585223_22585311_22586744_22586862_22587472_22587540_22597696_22597780_22597855_22598057_22599910_22599966_22601177_22601265_22603645_22603717_22603791_22603876_22608757_22608856_22610799_22610885_22613559_22613698_22615001
ES.32589.2	chr8	-	176	1	Intergenic	novelGene_26612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	22574493	22574317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_22574300_22574500
ES.3259.1	chr10	+	1601	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	-454	-4	-454	4	multi-exon	FALSE	canonical	3	316	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTGGTCACCTGTGTG	7511	False	NA	15	True	AATAAA	-17	NA	79504748	79511965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79505618_79511233
ES.3259.2	chr10	+	890	2	FSM	ENSMUSG00000020308.8	ENSMUST00000219585.2	368	2	7	-529	7	0	multi-exon	FALSE	canonical	3	20	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTGCTGGTCACCTG	8486	False	NA	11	True	AATAAA	-13	NA	79505723	79511961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79505886_79511233
ES.32590.1	chr8	+	174	1	Intergenic	novelGene_26614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAACAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	22642725	22642899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22642700_22642900
ES.32591.1	chr8	+	173	1	Intergenic	novelGene_26615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	22651045	22651218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22651000_22651200
ES.32592.1	chr8	-	2009	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	9	3	9	0	multi-exon	FALSE	canonical	3	19	junction_15	6.34350061086148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTGTGTGCTGGTTTT	NA	False	NA	-1	True	AATACA	-14	NA	22656419	22618301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ES.32592.2	chr8	-	2569	15	NIC	ENSMUSG00000031478.17	novel	2021	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	19	junction_14	5.41963550246618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCGTGTGTGCTGGTTT	NA	False	NA	-2	True	AATACA	-13	NA	22656426	22618302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ES.32593.1	chr8	+	755	1	Intergenic	novelGene_26616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22668655	22669410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22668700_22669400
ES.32594.1	chr8	-	2629	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	-20	-16	-20	16	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTTACCTAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	22675855	22658159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.10	chr8	-	3965	8	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	6	-6	intron_retention	FALSE	canonical	3	249	junction_5	11.2431384971149	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATTTCATTGATTGA	NA	False	NA	-7	True	AATAAA	-20	NA	22675829	22658466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22658991_22659728_22659964_22663277_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.11	chr8	-	2208	8	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	314	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	118.481377164067	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACATTTCATTGATTG	NA	False	NA	-8	True	AATAAA	-19	NA	22675521	22658467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22669529_22669612_22675405
ES.32594.12	chr8	-	3984	8	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	280	-7	intron_retention	FALSE	canonical	3	41	junction_7	80.478416424555	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACATTTCATTGATTG	NA	False	NA	-8	True	AATAAA	-19	NA	22675555	22658467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659728_22659964_22663277_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
ES.32594.13	chr8	-	3780	1	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	-2062	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACATTTCATTGATTG	9420	False	NA	-8	True	AATAAA	-19	NA	22662247	22658467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22658500_22662200
ES.32594.14	chr8	-	2877	2	NNC	ENSMUSG00000037725.9	novel	987	2	NA	NA	-2022	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGACATTTCATTGATT	9460	False	NA	-9	True	AATAAA	-18	NA	22662207	22658468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659852
ES.32594.15	chr8	-	3890	8	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	-16	-8	intron_retention	FALSE	canonical	0	0	junction_4	94.5606381414291	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGACATTTCATTGATT	NA	False	NA	-9	True	AATAAA	-18	NA	22675851	22658468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659728_22659964_22663277_22665188_22665770_22665976_22666884_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.16	chr8	-	4113	3	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	-3	753	intron_retention	FALSE	canonical	3	261	junction_1	0.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	22675838	22663863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22667756_22669529_22669612_22675699
ES.32594.17	chr8	-	2604	6	ISM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	19	5691	19	750	5prime_fragment	FALSE	canonical	3	249	junction_3	10.2683981223947	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	22675816	22663866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.2	chr8	-	2622	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	-7	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.8623290582162	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTATTTTTACCTAG	NA	False	NA	NA	False	NA	NA	NA	22675842	22658164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22659002_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.3	chr8	-	2619	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	279	11	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTATTTTTACCTAG	NA	False	NA	NA	False	NA	NA	NA	22675556	22658164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
ES.32594.4	chr8	-	2530	8	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	-8	11	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	96.2770237705884	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTATTTTTACCTAG	NA	False	NA	NA	False	NA	NA	NA	22675843	22658164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22675699
ES.32594.5	chr8	-	2714	3	ISM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	10902	-8	949	8	3prime_fragment	FALSE	canonical	3	274	junction_1	4.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGAGTTATTTTTACC	6734	False	NA	NA	False	NA	NA	NA	22664933	22658167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22658991_22659728_22659964_22663277
ES.32594.6	chr8	-	4468	7	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	8	8	intron_retention	FALSE	non_canonical	0	0	junction_1	98.6841200779313	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGAGTTATTTTTACC	NA	False	NA	NA	False	NA	NA	NA	22675827	22658167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22660158_22664003_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.7	chr8	-	2324	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	-16	285	-16	0	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675851	22658460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ES.32594.9	chr8	-	2324	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	274	-4	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTCATTGATTGACT	NA	False	NA	-5	True	AATAAA	-22	NA	22675561	22658464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
ES.32595.1	chr8	+	3696	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	-16	-106	-16	106	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTCTTGATTCAGACCT	NA	False	NA	NA	False	TTTAAA	-28	NA	22682808	22710965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.12	chr8	+	3509	14	NNC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	31	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	108.903953123462	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	2	True	GATAAA	-15	NA	22682855	22710852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22682956_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.13	chr8	+	4761	11	NIC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	31	4	intron_retention	FALSE	canonical	3	347	junction_4	30.9941930044968	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTCTCAGAAACTTACT	NA	False	NA	26	True	TATAAA	-21	NA	22682855	22708652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227
ES.32595.14	chr8	+	6848	12	NIC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	33	-8	intron_retention	FALSE	canonical	3	347	junction_4	29.6503034700788	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAATGTGGGAATTTT	NA	False	NA	1	True	GATAAA	-14	NA	22682857	22710851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.15	chr8	+	1991	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	34	1549	34	662	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCCCGAGTTGTAATC	NA	False	NA	NA	False	ATTAAA	-12	NA	22682858	22709310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.16	chr8	+	3529	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	37	8	37	-8	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAATGTGGGAATTTT	NA	False	NA	1	True	GATAAA	-14	NA	22682861	22710851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.17	chr8	+	799	6	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	42	12649	42	-10438	5prime_fragment	FALSE	canonical	3	316	junction_5	36.7564960245125	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATTATTCCATTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	22682866	22698210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872
ES.32595.18	chr8	+	3070	9	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	15042	7	-9142	-7	3prime_fragment	FALSE	canonical	3	365	junction_1	29.5441935919734	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	2	True	GATAAA	-15	NA	22697866	22710852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.2	chr8	+	1430	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	-14	2158	-14	53	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATGAATATGCATGTA	NA	False	NA	75	True	AATACA	-7	NA	22682810	22708701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.3	chr8	+	1289	14	NNC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	15	-32	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	108.903953123462	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGTATAATATAAAACTC	NA	False	NA	-10	True	AATAAA	-21	NA	22682839	22708616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22682956_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.4	chr8	+	3573	14	NNC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	110.906325418127	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	2	True	GATAAA	-15	NA	22682845	22710852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700377_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.5	chr8	+	1312	14	NNC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	21	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	110.906325418127	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAAACTCTTCATCTC	NA	False	NA	-2	True	AATAAA	-29	NA	22682845	22708624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700410_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32595.9	chr8	+	3472	13	NIC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	26	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	113.361607992595	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATGTGGGAATTTTT	NA	False	NA	2	True	GATAAA	-15	NA	22682850	22710852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22682983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ES.32596.1	chr8	+	2862	4	FSM	ENSMUSG00000031480.16	ENSMUST00000160585.2	3276	4	-61	475	-29	-473	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGCATTTTGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	22717299	22749920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22717446_22728470_22728614_22733012_22733973_22748307
ES.32596.2	chr8	+	6046	5	FSM	ENSMUSG00000031480.16	ENSMUST00000069828.10	4422	5	-5	-1619	-5	1619	multi-exon	FALSE	canonical	0	0	junction_2	1.4790199457749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACACGAGTTTTGATCCT	NA	False	NA	NA	False	NA	NA	NA	22717323	22752969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22717446_22728470_22728614_22733012_22733973_22742168_22742328_22748307
ES.32596.3	chr8	+	2469	3	ISM	ENSMUSG00000031480.16	ENSMUST00000162447.2	3273	4	15898	473	15898	-473	3prime_fragment	FALSE	canonical	2	2	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGCATTTTGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	22733275	22749920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22733973_22742168_22742328_22748307
ES.32597.1	chr8	-	3288	1	Antisense	novelGene_ENSMUSG00000031481.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAGGGGCAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	22862854	22859566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_22859600_22862900
ES.32598.1	chr8	+	175	1	Intergenic	novelGene_26617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGCAGGAGCAAGATA	5404	False	NA	NA	False	NA	NA	NA	22864945	22865120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22864900_22865100
ES.32599.1	chr8	+	5064	2	Antisense	novelGene_ENSMUSG00000031482.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAAACCTT	NA	False	NA	NA	False	NA	NA	NA	22876007	22886711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_22880095_22885734
ES.326.1	chr1	-	4550	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTGGATGATTTTTG	2212	False	NA	NA	False	NA	NA	NA	38019984	38015434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_38015400_38020000
ES.3260.1	chr10	-	1637	1	Intergenic	novelGene_2548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCAAGACCCAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	79510358	79508721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79508700_79510400
ES.32600.1	chr8	+	2993	4	NNC	ENSMUSG00000099825.2	novel	547	3	NA	NA	-19	3493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGCCGTTGTGCACA	NA	False	NA	NA	False	NA	NA	NA	22888717	22893105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22889000_22889140_22889295_22890422_22890491_22890616
ES.32601.1	chr8	-	5385	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	134	-2089	81	2089	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTTGTTTGTTGGGTTG	NA	False	NA	NA	False	NA	NA	NA	22888479	22863477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.10	chr8	-	3050	8	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.1574259180039	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCTCTGGTCGTAGT	NA	False	NA	-8	True	NA	NA	NA	22888571	22865568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867312_22867647_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.12	chr8	-	3409	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.289213854977	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTCTGGTCGTAG	NA	False	NA	-9	True	NA	NA	NA	22888576	22865569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880108_22885728_22885844_22888455
ES.32601.13	chr8	-	5570	4	ISM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	12578	3	12525	-3	3prime_fragment	FALSE	canonical	3	213	junction_1	15.1070255914995	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTCTGGTCGTAG	NA	False	NA	-9	True	NA	NA	NA	22876035	22865569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222
ES.32601.15	chr8	-	3181	8	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.1574259180039	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCTCTGGTCGTA	NA	False	NA	-10	True	NA	NA	NA	22888572	22865570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22865837_22866040_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.16	chr8	-	5330	4	ISM	ENSMUSG00000031482.10	ENSMUST00000210020.2	4430	6	8493	-1141	8493	-5	3prime_fragment	FALSE	canonical	3	211	junction_3	17.931970208417	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGACTTGCTCTGGTCGT	NA	False	NA	-11	True	NA	NA	NA	22880067	22865571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22867998_22869299_22869459_22870853_22873361_22879829
ES.32601.17	chr8	-	3020	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	-8	418	-8	-418	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAAAGAGTTATGGAT	NA	False	NA	38	True	TATAAA	-6	NA	22888621	22865984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.18	chr8	-	2810	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	19	-458	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	87.5893194909567	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAAGAGTTTCACTTAA	NA	False	NA	-2	True	AATAAA	-13	NA	22888594	22866024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879972_22880089_22885728_22885844_22888455
ES.32601.19	chr8	-	2311	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	-26	1145	-26	1	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGGGTAGTATGTATG	NA	False	NA	NA	False	AATAAA	-13	NA	22888639	22866711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.2	chr8	-	3966	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-8	46	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	86.8192566965033	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGCCTGTATTCATTT	NA	False	NA	40	True	NA	NA	NA	22888621	22865520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887973
ES.32601.20	chr8	-	1582	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	111	1737	58	-591	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCATAGTTGTGTGGCT	NA	False	NA	NA	False	ATTAAA	-35	NA	22888502	22867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.21	chr8	-	1487	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	282	-1064	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	92.1755571360072	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTTTGAACTTGTCT	NA	False	NA	NA	False	NA	NA	NA	22888278	22867776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887853
ES.32601.3	chr8	-	3636	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	211	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.5336275211462	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCGTAGTGTCTGTAC	NA	False	NA	0	True	NA	NA	NA	22888349	22865560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887991
ES.32601.4	chr8	-	3459	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	-27	-2	-27	2	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTGGTCGTAGTGTCT	NA	False	NA	-4	True	NA	NA	NA	22888640	22865564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ES.32601.5	chr8	-	3301	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	87.5893194909567	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGTCGTAGTGTC	NA	False	NA	-5	True	NA	NA	NA	22888626	22865565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879972_22880089_22885728_22885844_22888455
ES.32601.6	chr8	-	3389	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	92.2654684411599	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGTCGTAGTGT	NA	False	NA	-6	True	NA	NA	NA	22888582	22865566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873351_22879829_22880089_22885728_22885844_22888455
ES.32601.7	chr8	-	3615	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	100	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	110.690885904045	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTCTGGTCGTAGTG	NA	False	NA	-7	True	NA	NA	NA	22888460	22865567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879972_22880089_22885728_22885844_22887973
ES.32601.8	chr8	-	3544	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	-9985	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	91.4597665035773	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTCTGGTCGTAGTG	NA	False	NA	-7	True	NA	NA	NA	22898598	22865567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22898325
ES.32601.9	chr8	-	3875	8	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	102	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	110.364146795774	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCTCTGGTCGTAGT	NA	False	NA	-8	True	NA	NA	NA	22888458	22865568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22887077_22887159_22887934
ES.32602.1	chr8	-	155	1	Intergenic	novelGene_26618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22899019	22898864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_22898900_22899000
ES.32603.1	chr8	+	1522	7	FSM	ENSMUSG00000031533.5_ENSMUSG00000110129.2	ENSMUST00000033934.5	1515	7	-190	183	-190	-183	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTGTTGATCATTGTA	NA	False	NA	17	True	ATTAAA	-26	NA	22901186	22919498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ES.32603.10	chr8	+	1278	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	12	-192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	367.906879824531	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAATTCTCCTGTGTTG	NA	False	NA	8	True	ATTAAA	-17	NA	22901425	22919489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22901601_22904731_22905026_22909742_22909902_22911325_22911467_22914362_22914435_22917763_22917908_22919196
ES.32603.11	chr8	+	992	5	FSM	ENSMUSG00000031533.5	ENSMUST00000211083.2	2625	5	14	1619	14	-1619	multi-exon	FALSE	canonical	3	683	junction_2	50.8551865594848	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGCTTCCCGCGTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	22901427	22914593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362
ES.32603.12	chr8	+	2602	5	FSM	ENSMUSG00000031533.5	ENSMUST00000211083.2	2625	5	24	-1	24	1	multi-exon	FALSE	canonical	3	683	junction_2	50.8551865594848	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTGTCGTGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	22901437	22916213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362
ES.32603.13	chr8	+	1253	7	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	30	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	280.735937611604	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCCTGTGTTGATC	NA	False	NA	11	True	ATTAAA	-20	NA	22901443	22919492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919202
ES.32603.14	chr8	+	2538	6	ISM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	74	192	37	-192	intron_retention	FALSE	canonical	3	683	junction_2	51.1523215504438	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAATTCTCCTGTGTTG	NA	False	NA	8	True	ATTAAA	-17	NA	22901450	22919489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763
ES.32603.15	chr8	+	195	1	Intergenic	novelGene_26619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTAAGAGAGGGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	22913647	22913842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22913600_22913800
ES.32603.3	chr8	+	1490	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	25	0	-12	0	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTAATTTGC	NA	False	NA	NA	False	NA	NA	NA	22901401	22919681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ES.32603.4	chr8	+	4634	6	NIC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	-11	-182	intron_retention	FALSE	canonical	3	683	junction_2	46.6158771235724	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTTGATCATTGTAC	NA	False	NA	18	True	ATTAAA	-27	NA	22901402	22919499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22917908_22919196
ES.32603.5	chr8	+	1005	6	NIC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	-7	-192	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	284.186136185423	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAATTCTCCTGTGTTG	NA	False	NA	8	True	ATTAAA	-17	NA	22901406	22919489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22901601_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ES.32603.8	chr8	+	1133	6	NIC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	12	-189	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	305.20851888504	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCCTGTGTTGATC	NA	False	NA	11	True	ATTAAA	-20	NA	22901425	22919492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22919196
ES.32603.9	chr8	+	2231	8	NNC	ENSMUSG00000031533.5	novel	1515	7	NA	NA	12	1375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	265.946826049333	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTTCCCAGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	22901425	22921056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196_22920220_22920829
ES.32604.1	chr8	-	844	1	Antisense	novelGene_ENSMUSG00000110129.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGGATAAGAGTACCAG	NA	False	NA	NA	False	NA	NA	NA	22901320	22900476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_22900500_22901300
ES.32605.1	chr8	+	182	1	Intergenic	novelGene_26620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAC	7472	False	NA	NA	False	NA	NA	NA	22929755	22929937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_22929800_22929900
ES.32606.1	chr8	+	3739	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-115	-58	-115	58	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGCTTGTAGTTTCCCCT	NA	False	NA	73	True	AATAAA	-14	NA	22966688	23059686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.10	chr8	+	5030	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-62	3	intron_retention	FALSE	canonical	3	459	junction_6	39.8723271096108	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGACGTCTTTTTCTT	NA	False	NA	18	True	AATAAA	-23	NA	22966741	23059631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23055715_23058262
ES.32606.11	chr8	+	3067	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-61	560	-61	-560	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCATCTTCCCATTGC	NA	False	NA	NA	False	AAGAAA	-18	NA	22966742	23059068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.12	chr8	+	3868	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-60	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	163.275380875379	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTACTTCTGACG	NA	False	NA	8	True	AATAAA	-13	NA	22966743	23059621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055380_23055715_23058262
ES.32606.13	chr8	+	3794	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-60	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.236769389735	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTACTTCTGACG	NA	False	NA	8	True	AATAAA	-13	NA	22966743	23059621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23002765_23002941_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.14	chr8	+	3847	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	163.567233882584	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966743	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055408_23055715_23058262
ES.32606.15	chr8	+	3314	3	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-60	28247	-60	65	intron_retention	FALSE	canonical	3	480	junction_2	28	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAACATTGAAATCAAAT	NA	False	NA	NA	False	TTTAAA	-12	NA	22966743	23031381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22966942_23025034_23025589_23028819
ES.32606.16	chr8	+	2640	7	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.521271383751	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966743	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966844_23048967_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.17	chr8	+	740	2	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-59	-51893	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAAGTGTCAGTTGTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	22966744	22973344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_22972801
ES.32606.18	chr8	+	3601	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	166.94912398692	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966746	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050695_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.2	chr8	+	3524	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	160.129957552561	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966702	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025227_23025369_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.20	chr8	+	3515	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-53	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	176.873743070175	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTACTTCTGACG	NA	False	NA	8	True	AATAAA	-13	NA	22966750	23059621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.21	chr8	+	7560	9	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-52	5	-52	-5	intron_retention	FALSE	canonical	3	459	junction_6	40.1341500470609	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22966751	23059623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044
ES.32606.23	chr8	+	1845	4	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-47	28288	-47	24	5prime_fragment	FALSE	canonical	3	480	junction_2	27.3901847788988	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACATAGAAACTCATTT	NA	False	NA	NA	False	NA	NA	NA	22966756	23031340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375
ES.32606.24	chr8	+	3691	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-45	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	212.269164852334	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGACGTCTTTTTCTT	NA	False	NA	18	True	AATAAA	-23	NA	22966758	23059631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23027587_23027665_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.25	chr8	+	6488	2	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-44	28288	-44	24	intron_retention	FALSE	canonical	3	536	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACATAGAAACTCATTT	NA	False	NA	NA	False	NA	NA	NA	22966759	23031340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22966942_23025034
ES.32606.27	chr8	+	6834	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-37	0	intron_retention	FALSE	canonical	3	459	junction_5	42.7900415321251	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966766	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.28	chr8	+	3654	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.859496556071	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACTTCTGACGTCTT	NA	False	NA	12	True	AATAAA	-17	NA	22966766	23059625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23012655_23012710_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.29	chr8	+	2724	7	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	213.521271383751	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966767	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.3	chr8	+	3887	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-92	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	211.670334668116	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22966711	23059623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23012475_23012710_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.30	chr8	+	3593	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	163.567233882584	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTGACGTCTTTTTC	NA	False	NA	16	True	AATAAA	-21	NA	22966771	23059629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054225_23055629_23055715_23058262
ES.32606.31	chr8	+	3733	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.920219142156	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22966771	23059623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23012655_23012796_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.32	chr8	+	3335	10	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	169.581256243536	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22966772	23059623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054132_23058335
ES.32606.33	chr8	+	3605	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	162.4	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	False	NA	10	True	AATAAA	-15	NA	22966773	23059623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054245_23055629_23055715_23058262
ES.32606.36	chr8	+	3511	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-27	3	combination_of_known_splicesites	TRUE	canonical	2	10	junction_9	166.519268154369	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGACGTCTTTTTCTT	NA	False	NA	18	True	AATAAA	-23	NA	22966776	23059631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23058262
ES.32606.37	chr8	+	10810	8	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-27	0	intron_retention	FALSE	canonical	3	510	junction_3	33.8477985899786	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966776	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23028961_23030375_23030462_23035519_23035617_23048957_23050717_23050902_23051495_23054044_23054231_23055629
ES.32606.39	chr8	+	5002	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-21	0	intron_retention	FALSE	canonical	3	459	junction_5	47.4835904078945	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966782	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23028819_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.4	chr8	+	6204	10	ISM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	-90	0	-90	0	intron_retention	FALSE	canonical	3	459	junction_6	46.499966812679	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966713	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629
ES.32606.40	chr8	+	3498	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	176.542583958141	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966785	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23028819_23028961_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.41	chr8	+	2299	1	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-9	-56032	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTACTAAATAATT	NA	False	NA	NA	False	AATATA	-3	NA	22966906	22969205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966900_22969200
ES.32606.42	chr8	+	3221	1	Genic_Genomic	ENSMUSG00000097042.3	novel	NA	NA	NA	NA	-184	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACAAGTGTCAGTTGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	22970122	22973343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_22970100_22973300
ES.32606.43	chr8	+	3576	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	9742	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.823717036657	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGACGTCTTTTTCTT	1730	False	NA	18	True	AATAAA	-23	NA	22976657	23059631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22976803_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.44	chr8	+	3518	12	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	9830	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.236769389735	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	1818	False	NA	15	True	AATAAA	-20	NA	22976745	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22976803_23000402_23000436_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.45	chr8	+	3720	11	NIC	ENSMUSG00000037656.10	novel	436	3	NA	NA	137	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	165.224362610361	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22996378	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.46	chr8	+	3793	11	NNC	ENSMUSG00000037656.10	novel	436	3	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	218.083951725018	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22996441	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048821_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.47	chr8	+	3701	12	NNC	ENSMUSG00000037656.10	novel	436	3	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.838179642237	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22996474	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22996671_23025034_23025589_23027587_23027665_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.48	chr8	+	14187	2	Genic_Genomic	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-11837	24	multi-exon	TRUE	non_canonical	0	0	junction_1	0	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACATAGAAACTCATTT	NA	False	NA	NA	False	NA	NA	NA	23016957	23031340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_23019283_23019478
ES.32606.49	chr8	+	231	1	Intergenic	novelGene_26621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTATATTAGATATAT	NA	False	NA	NA	False	NA	NA	NA	23019291	23019522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23019300_23019500
ES.32606.5	chr8	+	5896	2	FSM	ENSMUSG00000097042.3	ENSMUST00000180411.3	2311	2	-3585	0	-3585	0	multi-exon	FALSE	canonical	3	14	junction_1	0	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTCAGTTGTTTCTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	22966721	22973348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_22972071_22972801
ES.32606.6	chr8	+	3504	10	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-79	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	176.760631894249	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966724	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22966942_23025034_23025589_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.7	chr8	+	3778	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	166.838245015943	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966727	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048821_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.8	chr8	+	3603	11	NNC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-71	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	166.94912398692	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGACGTCTTTTTCT	NA	False	NA	17	True	AATAAA	-22	NA	22966732	23059630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050681_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32606.9	chr8	+	3747	11	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	167.823717036657	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966735	23059628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_22967055_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ES.32607.1	chr8	-	2954	1	NIC	ENSMUSG00000031534.16	novel	1435	5	NA	NA	11287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCTTGCATCATTTTG	NA	False	NA	-1	True	NA	NA	NA	22955584	22952630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22952600_22955600
ES.32607.10	chr8	-	3941	3	ISM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	-3	389	-3	-389	intron_retention	FALSE	canonical	3	179	junction_1	6	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTTGGGGTAGTTTGC	NA	False	NA	-2	True	ATTAAA	-12	NA	22966901	22953019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22953392_22961464_22961590_22963457
ES.32607.2	chr8	-	1401	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	1	0	1	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCTTGCATCATTTTG	NA	False	NA	-1	True	NA	NA	NA	22966897	22952630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ES.32607.3	chr8	-	1271	3	NIC	ENSMUSG00000031534.16	novel	1402	4	NA	NA	-1	-7	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	106.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCTGCCTTGCAT	NA	False	NA	-8	True	NA	NA	NA	22966899	22952637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22953392_22963457_22963597_22966521
ES.32607.5	chr8	-	1590	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	-512	324	-512	-324	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTTGCTTCCACGA	NA	False	NA	63	True	NA	NA	NA	22967410	22952954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ES.32607.6	chr8	-	889	3	NIC	ENSMUSG00000031534.16	novel	1402	4	NA	NA	32	-329	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	106.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAATTTGTGTTGCTTC	NA	False	NA	58	True	NA	NA	NA	22966839	22952959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_22953392_22963457_22963597_22966521
ES.32607.9	chr8	-	1120	4	ISM	ENSMUSG00000031534.16	ENSMUST00000163774.3	1435	5	1957	389	1957	-388	3prime_fragment	FALSE	canonical	2	4	junction_3	85.4647425680451	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTGGGGTAGTTTGCT	NA	False	NA	-1	True	ATTAAA	-13	NA	22964914	22953018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_22953392_22961464_22961590_22963457_22963597_22964431
ES.32608.1	chr8	+	4987	1	Intergenic	novelGene_26622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGTTTCCTTCTTTGT	3725	False	NA	NA	False	NA	NA	NA	23083971	23088958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23084000_23089000
ES.32609.1	chr8	-	1484	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-35	-95	20	84	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGACTTCTGCTTCTCA	NA	False	NA	84	True	AATACA	-17	NA	23083809	23067006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.10	chr8	-	1304	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	728.733050832059	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	23083759	23067103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078778_23083699
ES.32609.14	chr8	-	2241	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2053	junction_7	120.771330561993	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	23083772	23067103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.15	chr8	-	2864	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	3	-2	intron_retention	FALSE	canonical	3	2053	junction_7	125.820409752171	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	23083771	23067103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.16	chr8	-	1106	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	766.784460042889	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	23083756	23067103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23069159_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.19	chr8	-	4502	5	NIC	ENSMUSG00000008892.13	novel	1423	9	NA	NA	236	-4	intron_retention	FALSE	canonical	3	2075	junction_2	35.0954056822257	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGTTCATCTGACTTC	NA	False	NA	-15	True	AATAAA	-18	NA	23075901	23067105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23070584_23072098_23072152_23073599
ES.32609.2	chr8	-	5515	6	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2053	junction_5	147.149447841302	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23083775	23067101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.20	chr8	-	6251	7	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	-10	-4	intron_retention	FALSE	canonical	1	3	junction_4	825.017710247618	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGTTCATCTGACTTC	NA	False	NA	-15	True	AATAAA	-18	NA	23083839	23067105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23073599_23073753_23077568_23077619_23078741
ES.32609.21	chr8	-	6109	7	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	-22	-5	intron_retention	FALSE	canonical	3	9	junction_2	826.886681071435	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAATTGTTCATCTGACTT	NA	False	NA	-16	True	AATAAA	-17	NA	23083796	23067106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741
ES.32609.22	chr8	-	1585	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-237	6	-182	-6	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTTCATCTGACT	NA	False	NA	-17	True	AATAAA	-16	NA	23084011	23067107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.23	chr8	-	6257	8	ISM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-21	7	-21	-7	intron_retention	FALSE	canonical	3	2075	junction_2	117.805443206074	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	False	NA	-18	True	AATAAA	-15	NA	23083795	23067108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741
ES.32609.24	chr8	-	1808	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	-21	-7	intron_retention	FALSE	canonical	3	2053	junction_7	125.738634005753	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	False	NA	-18	True	AATAAA	-15	NA	23083795	23067108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.25	chr8	-	2543	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	1	-7	intron_retention	FALSE	canonical	3	2053	junction_7	125.617820131914	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	False	NA	-18	True	AATAAA	-15	NA	23083773	23067108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23069007_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.26	chr8	-	2588	6	ISM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	8587	7	950	-7	3prime_fragment	FALSE	canonical	3	2075	junction_2	31.977492084277	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	False	NA	-18	True	AATAAA	-15	NA	23075187	23067108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599
ES.32609.29	chr8	-	958	7	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	9	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	823.301281427401	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACAATTGTTCATCTGA	NA	False	NA	-19	True	AATAAA	-14	NA	23083765	23067109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23067619_23068058_23068117_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.3	chr8	-	8948	1	FSM	ENSMUSG00000008892.13	ENSMUST00000211222.2	4174	1	88	-4862	88	0	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23076049	23067101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23067100_23076000
ES.32609.30	chr8	-	1125	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	-19	248	-19	-248	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCATGCCTGGAAATTG	NA	False	NA	NA	False	NA	NA	NA	23083793	23067349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.31	chr8	-	975	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	7	372	7	-372	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTTTTGGCCTTAAAA	NA	False	NA	NA	False	AATGAA	-14	NA	23083767	23067473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ES.32609.5	chr8	-	5592	9	NNC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	498	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	728.733050832059	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTCATCTGACTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	23083229	23067103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23078914
ES.3261.10	chr10	+	1138	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79517988	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518072_79518237_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.11	chr10	+	1185	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79517988	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518055_79518173_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.12	chr10	+	837	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-40	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGACCCGTGTGGGCCT	NA	False	NA	27	True	AATAAA	-18	NA	79517988	79523929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518068_79518233_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.14	chr10	+	2959	4	NNC	ENSMUSG00000020307.16	novel	979	5	NA	NA	-39	0	intron_retention	FALSE	non_canonical	0	0	junction_3	955.872143937439	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	False	NA	17	True	AATAAA	-17	NA	79517989	79524228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518425_79520651_79520739_79520838_79521115_79522067
ES.3261.18	chr10	+	1336	5	NIC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	4	junction_3	835.818274207976	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAGAATCACCTAGG	NA	False	NA	20	True	AATAAA	-20	NA	79518010	79524231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79518425_79520651_79520739_79520838_79520937_79521013_79521202_79523682
ES.3261.19	chr10	+	3287	10	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1078	6	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_5	937.909706359813	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGTCTGCCTCTGGCT	NA	False	NA	NA	False	AATAAA	-23	NA	79518014	79531094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682_79525300_79528657_79528815_79529707_79529777_79529957_79530097_79530188_79530452_79530782
ES.3261.2	chr10	+	1547	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-404	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGACGCCGGTGGCAC	NA	False	NA	33	True	AATAAA	-33	NA	79517624	79524244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518099_79518233_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.20	chr10	+	3270	8	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1078	6	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_5	932.183896195665	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGTCTGCCTCTGGCT	NA	False	NA	NA	False	AATAAA	-23	NA	79518016	79531094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682_79525300_79528657_79528815_79529957_79530452_79530820
ES.3261.24	chr10	+	1046	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	763.990157004657	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGAGAGAATCACCTA	NA	False	NA	18	True	AATAAA	-18	NA	79518018	79524229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518054_79518280_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.26	chr10	+	4572	6	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1266	5	NA	NA	-10	-3400	multi-exon	FALSE	non_canonical	0	0	junction_1	763.990157004657	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTGATCCTATTTCTA	NA	False	NA	NA	False	NA	NA	NA	79518018	79527694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518069_79518234_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.27	chr10	+	4399	5	FSM	ENSMUSG00000020307.16_ENSMUSG00000054206.3	ENSMUST00000218964.2	979	5	-289	-3131	-10	3127	multi-exon	FALSE	canonical	3	168	junction_4	778.055749930556	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCTGCTCTCTTCTATG	NA	False	NA	NA	False	NA	NA	NA	79518018	79527359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
ES.3261.28	chr10	+	3451	4	NNC	ENSMUSG00000020307.16	novel	914	4	NA	NA	-9	-18	intron_retention	FALSE	non_canonical	0	0	junction_1	955.872143937439	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCGTGTGGGCCTCAGG	NA	False	NA	31	True	AATAAA	-22	NA	79518019	79523933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518097_79518232_79518425_79520651_79520739_79520838
ES.3261.29	chr10	+	1402	4	NIC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-8	2	intron_retention	FALSE	canonical	3	1645	junction_3	181.846699783698	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79518020	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79518425_79520651_79520739_79520838_79521202_79523682
ES.3261.30	chr10	+	3231	10	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1078	6	NA	NA	-1	-9	intron_retention	FALSE	canonical	0	0	junction_5	935.062221472289	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGTCCACCCCTGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	79518027	79531085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682_79525300_79528657_79528815_79529707_79529777_79529957_79530097_79530184_79530452_79530820
ES.3261.31	chr10	+	4733	5	FSM	ENSMUSG00000020307.16_ENSMUSG00000054206.3	ENSMUST00000020550.13	1266	5	-1	-3466	-1	-3396	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCCTATTTCTACCTC	NA	False	NA	NA	False	NA	NA	NA	79518027	79527698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.34	chr10	+	4589	6	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1266	5	NA	NA	8	-3407	multi-exon	FALSE	non_canonical	0	0	junction_1	763.990157004657	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTTAATCTGATCCT	NA	False	NA	NA	False	NA	NA	NA	79518036	79527687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518105_79518228_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.37	chr10	+	1200	6	NNC	ENSMUSG00000020307.16	novel	1078	6	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79518037	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518163_79518217_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.41	chr10	+	1121	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	940.75807729724	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79518041	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518051_79518228_79518425_79520651_79520739_79520838_79520932_79521013_79521202_79523682
ES.3261.42	chr10	+	1110	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGAGAGAATCACCTA	NA	False	NA	18	True	AATAAA	-18	NA	79518042	79524229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518093_79518231_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.44	chr10	+	1068	4	NIC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	23	-24	intron_retention	FALSE	canonical	3	1645	junction_3	181.846699783698	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGGACCCGTGTGGGC	NA	False	NA	25	True	AATAAA	-16	NA	79518051	79523927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79518425_79520651_79520739_79520838_79521202_79523682
ES.3261.47	chr10	+	1176	5	NNC	ENSMUSG00000020307.16	novel	1078	6	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_2	807.873249649968	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	False	NA	17	True	AATAAA	-17	NA	79518077	79524228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518425_79520651_79520739_79520875_79520937_79521066_79521202_79523682
ES.3261.48	chr10	+	3631	9	Fusion	ENSMUSG00000020307.16_ENSMUSG00000054206.3	novel	1078	6	NA	NA	49	1027	intron_retention	FALSE	canonical	0	0	junction_5	941.614670393362	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGACGGCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	79518077	79532122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682_79525300_79528657_79528815_79529957_79530097_79530184_79530452_79531338
ES.3261.49	chr10	+	3338	4	ISM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-161	-155	-2	-22	intron_retention	FALSE	canonical	3	1800	junction_3	109.961609462374	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGACCCGTGTGGGCCT	NA	False	NA	27	True	AATAAA	-18	NA	79518134	79523929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066
ES.3261.5	chr10	+	1687	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	-402	-19	-402	19	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCGGTGGCACTCGGTAC	NA	False	NA	40	True	AATAAA	-40	NA	79517626	79524251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.6	chr10	+	1199	4	FSM	ENSMUSG00000020307.16	ENSMUST00000219791.2	799	4	-279	-121	-70	2	multi-exon	FALSE	canonical	3	28	junction_3	942.677510545833	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79517958	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79523682
ES.3261.8	chr10	+	1013	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	-47	300	-47	-19	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCGTGTGGGCCTCAG	NA	False	NA	30	True	AATAAA	-21	NA	79517981	79523932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.3261.9	chr10	+	1139	6	NNC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	763.990157004657	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAGAATCACCTAG	NA	False	NA	19	True	AATAAA	-19	NA	79517987	79524230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79518069_79518234_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ES.32610.1	chr8	+	179	1	Intergenic	novelGene_26623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATTAAAAAAAA	8334	False	NA	NA	False	NA	NA	NA	23093917	23094096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23093900_23094100
ES.32611.1	chr8	+	170	1	Intergenic	novelGene_26624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	8872	False	NA	NA	False	NA	NA	NA	23094455	23094625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23094500_23094600
ES.32612.1	chr8	+	187	1	Intergenic	novelGene_26625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	4476	False	NA	NA	False	NA	NA	NA	23100108	23100295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23100100_23100300
ES.32613.1	chr8	+	207	1	Intergenic	novelGene_26626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATGAGTAAAAGCCA	3902	False	NA	NA	False	NA	NA	NA	23136043	23136250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23136000_23136200
ES.32614.1	chr8	+	5285	1	Genic_Genomic	ENSMUSG00000085199.2	novel	NA	NA	NA	NA	6332	2235	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23182612	23187897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_23182600_23187900
ES.32615.11	chr8	-	4604	4	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	17656	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	99.3724755095136	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTGTCTTAACAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	23125778	23118147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23118386_23120358_23120499_23121470_23123053_23123134
ES.32615.12	chr8	-	2041	1	NIC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	14769	603	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	23128665	23126624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23126600_23128700
ES.32615.13	chr8	-	2795	1	NIC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	13412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTCTTGTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	23130022	23127227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23127200_23130000
ES.32615.14	chr8	-	2716	6	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	-7	-7630	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	82.954445329952	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATGCCCAGGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	23143441	23134857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23136027_23136252_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ES.32615.15	chr8	-	7624	3	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	-2	-7649	intron_retention	FALSE	non_canonical	0	0	junction_1	93	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	23143436	23134876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23136027_23136252_23137488_23138197
ES.32615.16	chr8	-	527	6	ISM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	1	16805	1	-7719	5prime_fragment	FALSE	canonical	3	186	junction_2	12.4803846094582	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTACATCATAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	23143433	23134946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ES.32615.17	chr8	-	5064	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	-3	-1084	-3	528	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGGGAGGAAAAGGTTTA	NA	False	NA	NA	False	NA	NA	NA	23196608	23148699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.18	chr8	-	3718	19	ISM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	12705	-524	192	524	3prime_fragment	FALSE	canonical	3	43	junction_1	16.3011777200829	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTTGGGGAGGAAAAGG	9639	False	NA	NA	False	NA	NA	NA	23183889	23148703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830
ES.32615.19	chr8	-	3731	23	NNC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-3	519	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.5458185027453	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	23196544	23148708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23149417_23149734_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.2	chr8	-	3598	4	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	18674	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	99.3724755095136	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAACAAATGTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	23124760	23118141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23118386_23120358_23120499_23121470_23123046_23123121
ES.32615.20	chr8	-	3429	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_9	25.1759309659047	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196567	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.21	chr8	-	3574	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	6	0	2	0	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196588	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.22	chr8	-	4519	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	14	-556	-1	0	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196591	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.23	chr8	-	4400	20	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	4	junction_8	23.848668784024	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196596	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.24	chr8	-	3763	22	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	24.4148759530016	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196574	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150679_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.25	chr8	-	5934	20	NNC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-7	0	intron_retention	FALSE	canonical	2	4	junction_14	25.8291853221202	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196563	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171744_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.26	chr8	-	6347	20	NNC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	3	0	intron_retention	FALSE	canonical	3	8	junction_9	23.1182675308685	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196572	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23161709_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.27	chr8	-	4604	18	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	4	junction_6	24.9811001223285	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196546	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.28	chr8	-	6769	4	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-1021	0	intron_retention	FALSE	canonical	3	84	junction_2	1.88561808316413	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	5884	False	NA	0	True	NA	NA	NA	23160063	23149227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23158762_23158960
ES.32615.29	chr8	-	3483	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	24.678482530334	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196589	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.3	chr8	-	1132	13	NIC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	7	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	58.8502690449811	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTCTTAACAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	23143427	23118145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143329
ES.32615.30	chr8	-	3417	22	NNC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.4148759530016	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196556	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150352_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.31	chr8	-	3106	9	NNC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	-1042	0	intron_retention	FALSE	canonical	0	0	junction_7	29.9947912144759	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	5863	False	NA	-1	True	NA	NA	NA	23160084	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157396_23158699_23158762_23158960
ES.32615.32	chr8	-	7333	16	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_11	29.385257074481	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196568	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.33	chr8	-	6733	17	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	26.731813327008	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196575	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.34	chr8	-	4441	21	NNC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	8	0	intron_retention	FALSE	canonical	3	8	junction_10	23.9016212839213	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196567	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161709_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.35	chr8	-	7090	18	NIC	ENSMUSG00000031537.16	novel	3705	21	NA	NA	1	0	intron_retention	FALSE	canonical	3	68	junction_5	14.2847948295311	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196578	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.36	chr8	-	4430	20	NIC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_14	25.7458277285731	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196593	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.37	chr8	-	7140	17	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	28.4536355322128	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196574	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.38	chr8	-	3326	20	NNC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.366149676439	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196575	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150476_23153705_23153834_23155504_23155634_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.39	chr8	-	6294	6	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	-938	0	intron_retention	FALSE	canonical	3	68	junction_5	9.02441133814278	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	5967	False	NA	-1	True	NA	NA	NA	23159980	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699
ES.32615.4	chr8	-	1228	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	-31	4	-14	-4	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTCTTAACAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	23143465	23118145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ES.32615.40	chr8	-	3817	22	NNC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	30.3732636934573	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196589	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150679_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171809_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.41	chr8	-	8432	17	NNC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	25.9274830054905	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196574	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23161762_23162338_23162506_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.42	chr8	-	5959	19	NNC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	-4	0	intron_retention	FALSE	canonical	3	8	junction_8	24.8041712939628	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196560	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23151509_23153705_23153834_23155504_23155928_23156006_23156057_23157239_23158762_23158960_23159113_23159622_23159747_23161646_23161709_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.43	chr8	-	7364	18	NIC	ENSMUSG00000031537.16	novel	3705	21	NA	NA	-4	0	intron_retention	FALSE	canonical	2	3	junction_6	25.3898325834559	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196560	23149228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23153834_23155504_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.44	chr8	-	3736	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	-2	intron_retention	FALSE	canonical	3	43	junction_1	19.1083097106992	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196578	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.45	chr8	-	5938	20	FSM	ENSMUSG00000031537.16	ENSMUST00000146212.8	4845	20	49	-1142	-4	-2	multi-exon	FALSE	canonical	3	43	junction_1	17.3881865204775	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196545	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.46	chr8	-	6832	19	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	1	-2	intron_retention	FALSE	canonical	2	3	junction_8	24.4649535175786	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196589	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23158762_23158960_23159113_23159622_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.47	chr8	-	3611	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	-2	intron_retention	FALSE	canonical	3	43	junction_1	18.9037033408801	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196549	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.49	chr8	-	4985	20	NNC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	0	-2	intron_retention	FALSE	canonical	2	4	junction_14	25.1968427868769	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196575	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171744_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.50	chr8	-	4403	20	NIC	ENSMUSG00000031537.16	novel	3705	21	NA	NA	4	-2	intron_retention	FALSE	canonical	2	2	junction_1	30.6271474457681	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCATGAGTCATGTCAT	NA	False	NA	-3	True	NA	NA	NA	23196537	23149230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150679_23151417_23151509_23153705_23153834_23155504_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.51	chr8	-	6371	20	NIC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	3	-3	intron_retention	FALSE	canonical	3	68	junction_6	14.0991738623619	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCCATGAGTCATGTCA	NA	False	NA	-4	True	NA	NA	NA	23196547	23149231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.52	chr8	-	7116	15	NIC	ENSMUSG00000031537.16	novel	3705	21	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_10	35.5382088140959	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCCATGAGTCATGTCA	NA	False	NA	-4	True	NA	NA	NA	23196589	23149231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23158762_23158960_23159113_23159622_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.53	chr8	-	3473	21	NNC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	30.3148066132707	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACCCATGAGTCATGTCA	NA	False	NA	-4	True	NA	NA	NA	23196607	23149231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23150476_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171744_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.55	chr8	-	4377	20	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	-6	intron_retention	FALSE	canonical	3	4	junction_9	25.8291853221202	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCACCCATGAGTCATG	NA	False	NA	-7	True	NA	NA	NA	23196549	23149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.56	chr8	-	5006	20	NIC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	0	-6	intron_retention	FALSE	canonical	3	51	junction_8	16.3232580529318	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCACCCATGAGTCATG	NA	False	NA	-7	True	NA	NA	NA	23196575	23149234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.58	chr8	-	6896	19	NIC	ENSMUSG00000031537.16	novel	4845	20	NA	NA	9	-7	intron_retention	FALSE	canonical	3	68	junction_6	13.8844437331057	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCACCCATGAGTCAT	NA	False	NA	-8	True	NA	NA	NA	23196566	23149235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.59	chr8	-	5030	20	NIC	ENSMUSG00000031537.16	novel	3536	22	NA	NA	0	-8	intron_retention	FALSE	canonical	2	3	junction_9	25.9948854973851	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTCACCCATGAGTCA	NA	False	NA	-9	True	NA	NA	NA	23196575	23149236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.6	chr8	-	5354	32	Fusion	ENSMUSG00000031536.7_ENSMUSG00000031537.16	novel	1201	14	NA	NA	-4	-4	intron_retention	FALSE	canonical	0	0	junction_14	67.4237535221961	270	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTCTTAACAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	23196598	23118145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127116_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329_23143858_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23159113_23159622_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.60	chr8	-	7239	20	NIC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	1	-10	intron_retention	FALSE	canonical	3	51	junction_9	16.6625294957481	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAAATTCACCCATGAGT	NA	False	NA	-11	True	NA	NA	NA	23196574	23149238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.61	chr8	-	3983	17	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	-15	intron_retention	FALSE	canonical	0	0	junction_12	34.1684704808395	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGTGTAAATTCACCCA	NA	False	NA	-16	True	NA	NA	NA	23196574	23149243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.62	chr8	-	3127	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	27	426	8	130	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATTACTCAGATATGT	NA	False	NA	NA	False	ATTAAA	-33	NA	23196567	23149653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.63	chr8	-	5733	20	NIC	ENSMUSG00000031537.16	novel	4845	20	NA	NA	1	116	intron_retention	FALSE	canonical	2	2	junction_1	24.2179622448062	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTATTTTTTGTAACA	NA	False	NA	NA	False	ATTAAA	-19	NA	23196574	23149667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150679_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.64	chr8	-	5023	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	115	intron_retention	FALSE	canonical	3	43	junction_1	17.2779483735772	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCTATTTTTTGTAAC	NA	False	NA	NA	False	ATTAAA	-18	NA	23196578	23149668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.65	chr8	-	3349	22	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	1	112	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	24.4148759530016	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTCTATTTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	23196604	23149671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23150679_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.66	chr8	-	2762	7	ISM	ENSMUSG00000031537.16	ENSMUST00000125314.8	3536	22	37876	443	362	112	3prime_fragment	FALSE	canonical	3	43	junction_1	16.779617264871	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTCTATTTTTTGT	7267	False	NA	NA	False	ATTAAA	-15	NA	23158680	23149671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239
ES.32615.67	chr8	-	4062	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	27	-112	1	112	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTCTATTTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	23196578	23149671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.68	chr8	-	3692	9	NNC	ENSMUSG00000031537.16	novel	3587	8	NA	NA	3	245	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	34.9390093591676	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGTACATGTGTGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	23196547	23165754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23168675_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.69	chr8	-	2950	9	NNC	ENSMUSG00000031537.16	novel	3587	8	NA	NA	9	242	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	35.2482269057608	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAAGTACATGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	23196566	23165757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23167917_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.70	chr8	-	3821	8	FSM	ENSMUSG00000031537.16	ENSMUST00000150259.8	3587	8	8	-242	2	242	multi-exon	FALSE	canonical	3	86	junction_2	13.3064354539372	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAAGTACATGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	23196548	23165757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.71	chr8	-	7445	7	NNC	ENSMUSG00000031537.16	novel	1106	7	NA	NA	-4	241	intron_retention	FALSE	canonical	1	3	junction_1	40.2757853913352	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTAAAGTACATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	23196583	23165758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23168675_23168805_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.72	chr8	-	3664	6	NIC	ENSMUSG00000031537.16	novel	3587	8	NA	NA	1	238	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.2928250388514	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAGTAAAGTACATG	NA	False	NA	NA	False	AATAAA	-15	NA	23196574	23165761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23168931_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.73	chr8	-	2504	9	NNC	ENSMUSG00000031537.16	novel	3587	8	NA	NA	4	-967	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	34.9390093591676	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATGTACTGATTTCAGC	NA	False	NA	NA	False	AATAAA	-17	NA	23196571	23166966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23168675_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.74	chr8	-	3186	7	FSM	ENSMUSG00000031537.16	ENSMUST00000144583.8	1106	7	-35	-2045	0	2045	multi-exon	FALSE	canonical	3	86	junction_1	13.9642400437689	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGATTGACTCTGCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	23196590	23169182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.75	chr8	-	1209	7	FSM	ENSMUSG00000031537.16	ENSMUST00000144583.8	1106	7	-23	-80	1	80	multi-exon	FALSE	canonical	3	86	junction_1	13.9642400437689	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAAATGCGCAT	NA	False	NA	NA	False	AATACA	-32	NA	23196578	23171147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.76	chr8	-	3496	5	FSM	ENSMUSG00000031537.16	ENSMUST00000144895.8	2423	5	-3	-1070	1	1070	multi-exon	FALSE	canonical	3	95	junction_3	10.5445483544816	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTACTATGACCCCAAAATA	NA	False	NA	NA	False	NA	NA	NA	23196578	23178076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ES.32615.77	chr8	-	613	3	FSM	ENSMUSG00000031537.16	ENSMUST00000150214.2	601	3	-33	21	1	-21	multi-exon	FALSE	canonical	3	15	junction_1	54.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTTTTTAAAGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	23196574	23192488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23192890_23196097_23196221_23196485
ES.32615.8	chr8	-	1074	13	NIC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	46	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.0082385961674	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTGTCTTAACAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	23143388	23118147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23140504_23140572_23143075_23143134_23143329
ES.32615.9	chr8	-	5237	2	NNC	ENSMUSG00000031536.7	novel	1201	14	NA	NA	19975	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTGTCTTAACAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	23123459	23118147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23123024_23123098
ES.32616.1	chr8	+	2566	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	-38	-3	-18	3	multi-exon	FALSE	canonical	0	0	junction_8	2.12619614785927	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGCATATCCATGGCT	NA	False	NA	NA	False	AATAAA	-27	NA	23247724	23272863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ES.32617.1	chr8	-	3408	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	-22	-13	-22	13	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGACTACCCTTCACT	NA	False	NA	12	True	AATAAA	-31	NA	23295660	23277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
ES.32617.2	chr8	-	2747	6	NNC	ENSMUSG00000031539.7	novel	3417	9	NA	NA	11542	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.33306666239986	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTCTGGTTACTGAGA	NA	False	NA	0	True	AATAAA	-19	NA	23284076	23277368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23284003
ES.32617.3	chr8	-	3420	9	FSM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	-3	0	-3	0	multi-exon	FALSE	canonical	0	0	junction_8	7.29618907375624	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	-1	True	AATAAA	-18	NA	23295623	23277369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295529
ES.32618.1	chr8	+	1025	1	Intergenic	novelGene_26627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGTCATGGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	23327961	23328986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23328000_23329000
ES.32619.1	chr8	+	9133	18	FSM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-20	0	-6	0	multi-exon	FALSE	canonical	2	9	junction_7	4.68894009020697	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGCCTGTGGAA	NA	False	NA	9	True	AATAAA	-21	NA	23349544	23433275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ES.32619.2	chr8	+	6509	18	NNC	ENSMUSG00000031540.15	novel	9113	18	NA	NA	2	-2501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.13064230619478	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGTTTTTCTTTGGTTT	NA	False	NA	57	True	ATTAAA	-18	NA	23349552	23430774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413678_23415416_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ES.32619.3	chr8	+	4047	18	NNC	ENSMUSG00000031540.15	novel	9113	18	NA	NA	4	-5055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.90056005787076	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCGTAGTCCCCATTAAA	NA	False	NA	NA	False	NA	NA	NA	23349554	23428220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400263_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ES.32619.4	chr8	+	4359	22	Fusion	ENSMUSG00000031543.19_ENSMUSG00000031540.15	novel	9113	18	NA	NA	-3	-36605	multi-exon	FALSE	canonical	0	0	junction_17	8.19019933086888	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCAACGATGACACACGG	NA	False	NA	NA	False	NA	NA	NA	23349561	23577049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23554967_23555070_23572208_23572308_23574734_23574834_23575594_23575694_23576934
ES.32619.5	chr8	+	6577	18	FSM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	-3	2539	-3	-2539	multi-exon	FALSE	canonical	2	9	junction_7	4.68894009020697	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTTTTTCCAATTAA	NA	False	NA	19	True	AATAAA	-35	NA	23349561	23430736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ES.32619.6	chr8	+	8712	3	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	0	72830	0	-53216	5prime_fragment	FALSE	canonical	3	19	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAACCTTCTAGGTACA	NA	False	NA	NA	False	NA	NA	NA	23349564	23360445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_23349649_23351532_23351619_23351903
ES.32619.7	chr8	+	2911	1	Intergenic	novelGene_26628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	23371447	23374358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23371400_23374400
ES.32619.8	chr8	+	6184	3	ISM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	72564	8	18327	-8	3prime_fragment	FALSE	canonical	3	21	junction_2	1	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGATGTCTGTCTTGC	NA	False	NA	1	True	AATAAA	-13	NA	23422128	23433267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_23422731_23425495_23425815_23428004
ES.32619.9	chr8	+	172	1	Intergenic	novelGene_26629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATATATGATTTAATAT	NA	False	NA	NA	False	NA	NA	NA	23527317	23527489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23527300_23527500
ES.3262.1	chr10	-	179	1	Intergenic	novelGene_2549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTATTTATT	5035	False	NA	NA	False	NA	NA	NA	79539297	79539118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79539100_79539300
ES.32620.1	chr8	-	4012	1	Antisense	novelGene_ENSMUSG00000031540.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	23416286	23412274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_23412300_23416300
ES.32620.2	chr8	-	4142	7	Antisense	novelGene_ENSMUSG00000031540.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23428222	23412299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_23413674_23415298_23416487_23419231_23419462_23420179_23420393_23422128_23422727_23425491_23425815_23428006
ES.32621.1	chr8	-	192	1	Intergenic	novelGene_26630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAGATGCAGACAA	NA	False	NA	NA	False	NA	NA	NA	23580957	23580765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23580800_23581000
ES.32622.1	chr8	+	2854	5	ISM	ENSMUSG00000031543.19	ENSMUST00000141784.9	6566	42	97265	-1212	-6534	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGGTCTCCATCGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	23622511	23640509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_23622651_23625573_23625851_23630160_23630245_23631179_23631321_23638296
ES.32623.1	chr8	+	2246	3	FSM	ENSMUSG00000063672.8	ENSMUST00000071588.8	2238	3	-32	24	-32	-24	multi-exon	FALSE	canonical	1	1	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAAGAAGCAGA	NA	False	NA	NA	False	AATAAA	-20	NA	23643252	23648940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23643986_23646216_23646387_23647597
ES.32623.2	chr8	+	1670	3	FSM	ENSMUSG00000063672.8	ENSMUST00000071588.8	2238	3	256	312	256	-312	multi-exon	FALSE	canonical	1	1	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCGCGGCTCCTGCACT	NA	False	NA	NA	False	AATAAA	-20	NA	23643540	23648652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23643986_23646216_23646387_23647597
ES.32624.1	chr8	-	6845	2	Intergenic	novelGene_26631	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTTTCTGCTTCTT	NA	False	NA	NA	False	AAGAAA	-34	NA	23656923	23648970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23655721_23656828
ES.32624.2	chr8	-	5547	2	Intergenic	novelGene_26632	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATCTTGTTCAATCT	NA	False	NA	NA	False	NA	NA	NA	23656867	23650212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23655721_23656828
ES.32624.3	chr8	-	5827	3	Intergenic	novelGene_26633	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTATTTTAATCTTG	NA	False	NA	NA	False	NA	NA	NA	23656945	23650220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23655721_23656168_23656379_23656828
ES.32624.4	chr8	-	3269	1	Intergenic	novelGene_26634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGCCTTGTGCATGCTA	NA	False	NA	NA	False	NA	NA	NA	23656896	23653627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23653600_23656900
ES.32625.1	chr8	+	4552	2	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23666618	23671438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23669516_23669783
ES.32625.2	chr8	+	4410	3	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23666619	23671438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23669847_23670123_23670747_23670878
ES.32625.3	chr8	+	4850	1	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	23666619	23671469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23666600_23671500
ES.32625.4	chr8	+	4173	4	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAACAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	23666619	23671468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23669516_23669783_23669840_23670115_23670747_23670878
ES.32625.5	chr8	+	4160	4	Antisense	novelGene_ENSMUSG00000031545.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23666625	23671464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23669513_23669781_23669840_23670115_23670741_23670874
ES.32626.1	chr8	+	206	1	Intergenic	novelGene_26635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACACTCATTTCCTCACT	NA	False	NA	NA	False	AATAAA	-11	NA	23683744	23683950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23683700_23684000
ES.32627.1	chr8	+	157	1	Intergenic	novelGene_26636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	23689222	23689379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23689200_23689400
ES.32628.1	chr8	-	5548	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-30	0	-30	0	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTTGATTTATTAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	23698392	23661280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.11	chr8	-	4440	4	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	1069	-2470	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	124.432935975792	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23669174	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23665523_23666147_23666363
ES.32628.12	chr8	-	3062	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	0	-2470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.040203526607	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23698361	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664692_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.13	chr8	-	2933	12	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	2	-2470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.8638014526393	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23698359	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670983_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.14	chr8	-	3329	12	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-5	-2470	intron_retention	FALSE	canonical	3	189	junction_10	21.0803264986398	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23698367	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.15	chr8	-	3037	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	1	-2470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.8438248663032	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23698360	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670734_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.16	chr8	-	3080	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-14	-2470	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	68.2336671543699	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23698376	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23665523_23665671_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.17	chr8	-	6663	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-54	-2471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.0218866254272	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGGGACTTTGCCTT	NA	False	NA	-21	True	AATAAA	-15	NA	23698416	23663751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23665523_23666156_23666371_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.19	chr8	-	3134	13	NNC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-48	-2472	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.9488180242052	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAGGGACTTTGCCT	NA	False	NA	-22	True	AATAAA	-14	NA	23698410	23663752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670766_23670875_23670983_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.2	chr8	-	3945	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-109	1682	-109	-1682	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTCCGTAGTGTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	23698471	23662962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.20	chr8	-	3193	12	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-14	-2472	intron_retention	FALSE	canonical	3	189	junction_10	22.2075112004702	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTAGGGACTTTGCCT	NA	False	NA	-22	True	AATAAA	-14	NA	23698376	23663752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.22	chr8	-	5214	10	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-27	4876	-27	2656	5prime_fragment	FALSE	canonical	3	189	junction_8	19.7790261778281	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTAAATATATAAATTGTA	NA	False	NA	NA	False	AAAAAG	-4	NA	23698389	23666156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.23	chr8	-	3991	5	NIC	ENSMUSG00000031545.7	novel	2316	7	NA	NA	-36	0	intron_retention	FALSE	canonical	3	189	junction_3	18.7932833746528	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGGGGGAGTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	23698398	23669986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23670743_23670875_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.24	chr8	-	2351	7	FSM	ENSMUSG00000031545.7	ENSMUST00000211260.2	2316	7	-36	1	-35	-1	multi-exon	FALSE	canonical	3	189	junction_5	17.4992063312089	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGTGGGGGAGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	23698397	23669987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.25	chr8	-	1386	2	ISM	ENSMUSG00000031545.7	ENSMUST00000211260.2	2316	7	-4	10387	-3	-9736	5prime_fragment	FALSE	canonical	3	217	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	23698365	23680373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_23681709_23698314
ES.32628.3	chr8	-	4349	11	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-30	-1748	intron_retention	FALSE	canonical	3	189	junction_9	23.2036635038521	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAACAGCCTCTTGGGA	NA	False	NA	NA	False	AATAAA	-15	NA	23698392	23663028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.4	chr8	-	3166	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	-109	2461	-109	-2461	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTCATTCCTGAG	NA	False	NA	-11	True	AATAAA	-25	NA	23698471	23663741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.5	chr8	-	3868	12	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	-3	-2468	intron_retention	FALSE	canonical	3	189	junction_10	22.2521240512763	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23698365	23663748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.6	chr8	-	3133	12	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	4	-2468	intron_retention	FALSE	canonical	3	189	junction_10	21.895695641	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23698357	23663748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23664677_23665355_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ES.32628.8	chr8	-	2522	2	NIC	ENSMUSG00000031545.7	novel	5518	13	NA	NA	3883	-2470	intron_retention	FALSE	canonical	3	250	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGGGACTTTGCCTTC	NA	False	NA	-20	True	AATAAA	-16	NA	23666360	23663750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23665436_23665523
ES.32629.1	chr8	-	176	1	Intergenic	novelGene_26637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATGCTATGGGCT	NA	False	NA	NA	False	NA	NA	NA	23711325	23711149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23711100_23711300
ES.3263.1	chr10	+	1450	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	-187	-2	-187	2	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCACTACTTGAAAC	NA	False	NA	23	True	AATAAA	-17	NA	79540137	79547805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.13	chr10	+	1360	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	2	-1	intron_retention	FALSE	canonical	1	1	junction_6	2475.90639407515	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540326	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547217_79547327
ES.3263.15	chr10	+	957	8	NNC	ENSMUSG00000023175.16	novel	1526	8	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	2320.27355881911	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540339	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327_79547492_79547779
ES.3263.16	chr10	+	831	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	15	415	-2	-156	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTGGGGCAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	79540339	79547388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.17	chr10	+	1474	6	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	6175	junction_4	141.126042954516	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540340	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.18	chr10	+	1809	5	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	6197	junction_3	123.884018339736	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540340	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79545975_79546093_79546237_79546471_79547115_79547327
ES.3263.19	chr10	+	6330	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	-5091	1	-1	-1	multi-exon	FALSE	canonical	3	6175	junction_4	464.180568313668	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540340	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.2	chr10	+	1303	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-37	2	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCACTACTTGAAAC	NA	False	NA	23	True	AATAAA	-17	NA	79540287	79547805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ES.3263.20	chr10	+	1165	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-36	intron_retention	FALSE	canonical	1	1	junction_6	2475.90639407515	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTAGGGGTTTATGTT	NA	False	NA	44	True	ACTAAA	-24	NA	79540340	79547621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547217_79547327
ES.3263.21	chr10	+	1232	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGTCACTACTTG	NA	False	NA	19	True	AATAAA	-13	NA	79540340	79547801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546769_79547327
ES.3263.22	chr10	+	952	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	3153.26908408824	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540340	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547306_79547485_79547772
ES.3263.23	chr10	+	833	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-1	-156	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTGGGGCAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	79540340	79547388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ES.3263.25	chr10	+	6555	5	NIC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	6175	junction_3	156.753588475671	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGTGTGTGTCACTAC	NA	False	NA	16	True	AATAAA	-10	NA	79540341	79547798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.27	chr10	+	1244	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	2689.50535229064	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540341	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546775_79547321
ES.3263.28	chr10	+	1069	8	NNC	ENSMUSG00000023175.16	novel	1526	8	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_7	2320.27355881911	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540341	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327_79547368_79547541
ES.3263.3	chr10	+	1231	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-28	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	2482.31944067551	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540296	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540362_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.30	chr10	+	955	8	NNC	ENSMUSG00000023175.16	novel	1526	8	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	2320.27355881911	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGTCACTACTTG	NA	False	NA	19	True	AATAAA	-13	NA	79540341	79547801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327_79547487_79547773
ES.3263.32	chr10	+	1041	7	NIC	ENSMUSG00000023175.16	novel	921	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2492.29740065935	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540341	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546673_79546755_79547089_79547115_79547327
ES.3263.33	chr10	+	1590	5	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	6175	junction_3	125.86972431844	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540343	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.35	chr10	+	1283	7	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	3	30818	intron_retention	FALSE	non_canonical	0	0	junction_5	3153.26908408824	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAGAGAAGCAAGCG	NA	False	NA	NA	False	NA	NA	NA	79540344	79578621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299_79547799_79578577
ES.3263.36	chr10	+	1242	7	NIC	ENSMUSG00000023175.16	novel	921	8	NA	NA	5	-1	intron_retention	FALSE	canonical	3	93	junction_4	2438.97243845755	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540346	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79545662_79545891_79546237_79546471_79546559_79546673_79546755_79547089_79547115_79547327
ES.3263.37	chr10	+	1450	6	ISM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	23	1	6	-1	intron_retention	FALSE	canonical	3	6175	junction_5	469.170587313399	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540347	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089
ES.3263.39	chr10	+	1194	7	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	29	-3	intron_retention	FALSE	canonical	2	5	junction_1	2480.48342062591	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGTCACTACTT	NA	False	NA	18	True	AATAAA	-12	NA	79540432	79547800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540463_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.4	chr10	+	1013	8	NNC	ENSMUSG00000023175.16	novel	1526	8	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	2320.27355881911	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540302	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327_79547500_79547768
ES.3263.40	chr10	+	5463	3	NIC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	1389	0	intron_retention	FALSE	canonical	3	6175	junction_1	150	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79541792	79547803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79546755_79547089_79547115_79547327
ES.3263.41	chr10	+	5392	4	NIC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	1446	0	intron_retention	FALSE	canonical	3	6475	junction_3	448.446454130504	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79541849	79547803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79545662_79545891_79545975_79546093_79547115_79547327
ES.3263.42	chr10	+	4673	5	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	1596	-2	intron_retention	FALSE	canonical	0	0	junction_4	2946.57032624372	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGTCACTACTTG	NA	False	NA	19	True	AATAAA	-13	NA	79541999	79547801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ES.3263.43	chr10	+	4024	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	-2977	193	2051	-47	multi-exon	FALSE	canonical	3	6175	junction_4	464.180568313668	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAATCCATTCCTTAG	NA	False	NA	33	True	ACTAAA	-13	NA	79542454	79547610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.44	chr10	+	3636	5	NIC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	-2279	-2	intron_retention	FALSE	canonical	3	6175	junction_3	518.412661400163	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGTCACTACTTG	NA	False	NA	19	True	AATAAA	-13	NA	79543152	79547801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79545662_79545891_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.45	chr10	+	2991	4	NIC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	-1401	1	intron_retention	FALSE	canonical	3	6175	junction_2	136.531640614507	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTCACTACTTGAAA	NA	False	NA	22	True	AATAAA	-16	NA	79544030	79547804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.46	chr10	+	2238	5	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	-967	-43	intron_retention	FALSE	canonical	1	91	junction_1	2683.53214066834	1562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCCATTCCTTAGGGGT	NA	False	NA	37	True	ACTAAA	-17	NA	79544464	79547614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79545975_79546103_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.47	chr10	+	3241	8	FSM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	-40	-6	-40	6	multi-exon	FALSE	canonical	3	76	junction_3	3.18157963590287	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGTCTCATTACTTTG	NA	False	NA	30	True	AATAAA	-20	NA	79552427	79571948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
ES.3263.48	chr10	+	2698	5	ISM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	-34	3989	-34	-3989	5prime_fragment	FALSE	canonical	3	76	junction_3	1.4790199457749	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGCGTTGATCGGTA	NA	False	NA	NA	False	NA	NA	NA	79552433	79567953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680
ES.3263.5	chr10	+	1095	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	-16	182	-16	-36	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTAGGGGTTTATGTT	NA	False	NA	44	True	ACTAAA	-24	NA	79540308	79547621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.3263.50	chr10	+	3390	9	NNC	ENSMUSG00000020331.10	novel	3089	9	NA	NA	-23	3	intron_retention	FALSE	canonical	0	0	junction_3	34.9533170815017	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCAGCGTCTCATTACT	NA	False	NA	27	True	AATAAA	-17	NA	79552444	79571945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79553054_79560221_79560646_79561980_79562143_79564473_79564643_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
ES.3263.51	chr10	+	3056	7	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	-18	5	intron_retention	FALSE	canonical	1	1	junction_2	29.8142396999972	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCAGCGTCTCATTACTTT	NA	False	NA	29	True	AATAAA	-19	NA	79552449	79571947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79553054_79560221_79560646_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
ES.3263.52	chr10	+	3081	9	NNC	ENSMUSG00000020331.10	novel	3089	9	NA	NA	-12	3	intron_retention	FALSE	non_canonical	0	0	junction_8	26.5774222790699	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCAGCGTCTCATTACT	NA	False	NA	27	True	AATAAA	-17	NA	79552455	79571945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691_79571209_79571337
ES.3263.53	chr10	+	5404	5	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	8884	6	intron_retention	FALSE	canonical	3	78	junction_1	3.53553390593274	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCGTCTCATTACTTTG	NA	False	NA	30	True	AATAAA	-20	NA	79561351	79571948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
ES.3263.7	chr10	+	1088	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-8	-38	intron_retention	FALSE	canonical	0	0	junction_5	2689.50535229064	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTTAGGGGTTTATG	NA	False	NA	42	True	ACTAAA	-22	NA	79540316	79547619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ES.3263.8	chr10	+	1262	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	2689.50535229064	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTGTCACTACTTGA	NA	False	NA	20	True	AATAAA	-14	NA	79540317	79547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546769_79547321
ES.3263.9	chr10	+	1315	6	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	-6	-36	intron_retention	FALSE	canonical	3	6175	junction_4	141.126042954516	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTAGGGGTTTATGTT	NA	False	NA	44	True	ACTAAA	-24	NA	79540318	79547621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79540419_79545504_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ES.32630.1	chr8	+	2437	4	Antisense	novelGene_ENSMUSG00000031546.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACAAATAGACATATGT	NA	False	NA	NA	False	NA	NA	NA	23716894	23721581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23717192_23717264_23717356_23719431_23719518_23719618
ES.32630.2	chr8	+	2510	3	Antisense	novelGene_ENSMUSG00000031546.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACAAATAGACATATGT	NA	False	NA	NA	False	NA	NA	NA	23716894	23721581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23717356_23719431_23719518_23719618
ES.32630.3	chr8	+	4687	1	Antisense	novelGene_ENSMUSG00000031546.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCACAAATAGACATATGT	NA	False	NA	NA	False	NA	NA	NA	23716894	23721581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_23716900_23721600
ES.32631.1	chr8	-	4126	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-19	-2758	-19	2758	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACGGATTCCTTGAAA	NA	False	NA	NA	False	NA	NA	NA	23727694	23713873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.10	chr8	-	1121	8	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	4	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	287.685202105016	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTTTCTACTACTT	NA	False	NA	-7	True	AATAAA	-20	NA	23727671	23716847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722622_23722735_23724769_23724857_23726995_23727110_23727485
ES.32631.11	chr8	-	1032	7	NIC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	10	-216	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	242.691676824732	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATTTTTCTACTACTT	NA	False	NA	-7	True	AATAAA	-20	NA	23727665	23716847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23717192_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.12	chr8	-	4014	7	NIC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	15	-221	intron_retention	FALSE	canonical	3	605	junction_1	24.6215804168259	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTTTATTTTTCTAC	NA	False	NA	-12	True	AATAAA	-15	NA	23727660	23716852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.13	chr8	-	1290	9	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	-9	-223	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	282.50793683541	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTTTATTTTTCT	NA	False	NA	-14	True	AATAAA	-13	NA	23727684	23716854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23723353_23723509_23724769_23724857_23726995_23727116_23727485
ES.32631.2	chr8	-	1863	1	Genic_Genomic	ENSMUSG00000031546.7	novel	NA	NA	NA	NA	10599	1418	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTTGTTTATCCCAAA	NA	False	NA	NA	False	NA	NA	NA	23717076	23715213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_23715200_23717100
ES.32631.3	chr8	-	1507	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	14	-172	14	172	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCTAACCAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	23727661	23716459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.4	chr8	-	1550	8	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	-33	172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	225.961708874648	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCTAACCAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	23727708	23716459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727110_23727483
ES.32631.6	chr8	-	1377	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-37	9	-37	-9	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAATGTCTCAAATG	NA	False	NA	-31	True	NA	NA	NA	23727712	23716640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.7	chr8	-	1158	8	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	10	-211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	225.961708874648	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACTACTTACTGA	NA	False	NA	-2	True	AATAAA	-25	NA	23727665	23716842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727455
ES.32631.8	chr8	-	1154	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	-16	211	-16	-211	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACTACTTACTGA	NA	False	NA	-2	True	AATAAA	-25	NA	23727691	23716842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ES.32631.9	chr8	-	1009	8	NNC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	-22	-211	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	221.432350198172	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACTACTTACTGA	NA	False	NA	-2	True	AATAAA	-25	NA	23727697	23716842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727636
ES.32632.1	chr8	-	2420	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	20	-648	12	648	multi-exon	TRUE	canonical	3	715	junction_5	234.329170185873	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCACCTTGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	23747070	23730713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.13	chr8	-	1048	4	NNC	ENSMUSG00000015341.18	novel	4771	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	542.686527073104	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	False	NA	-26	True	AGTAAA	-10	NA	23747058	23731368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23732203_23740359_23740418_23746689_23746823_23747035
ES.32632.14	chr8	-	1786	6	NNC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	509.488763369714	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	False	NA	-26	True	AGTAAA	-10	NA	23747070	23731368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23732669_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.17	chr8	-	1666	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	2	124	2	-117	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTTAATTGTATAACG	NA	False	NA	NA	False	AGTAAA	-17	NA	23747088	23731485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.18	chr8	-	1020	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	23	749	15	171	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGCAGTTATTATTAA	NA	False	NA	NA	False	AATATA	-14	NA	23747067	23732110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.19	chr8	-	4657	1	NIC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	-5289	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGATGGTATTATTTGG	NA	False	NA	NA	False	NA	NA	NA	23740483	23735826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23735800_23740500
ES.32632.2	chr8	-	1827	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	-6	-29	-6	29	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGGAATGCTATGGCA	NA	False	NA	10	True	AATAAA	-30	NA	23747096	23731332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.21	chr8	-	4753	3	FSM	ENSMUSG00000015341.18	ENSMUST00000211602.2	4771	3	4	14	4	-14	multi-exon	FALSE	canonical	3	715	junction_2	306.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAGTCATG	NA	False	NA	NA	False	NA	NA	NA	23747078	23735840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_23740418_23746689_23746823_23747035
ES.32632.3	chr8	-	1468	3	NNC	ENSMUSG00000015341.18	novel	1945	5	NA	NA	3	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	657	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTATGTGATTTGATAAA	NA	False	NA	-5	True	AATAAA	-15	NA	23747034	23731347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23732648_23734746_23734810_23746929
ES.32632.6	chr8	-	2847	5	NIC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	6	0	intron_retention	FALSE	canonical	3	715	junction_4	260.766658144787	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747076	23731361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_23732648_23734746_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.7	chr8	-	1775	6	NNC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	521.646393642283	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	False	NA	-26	True	AGTAAA	-10	NA	23747073	23731368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23732648_23734746_23734817_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ES.32632.9	chr8	-	2940	5	NNC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_2	543.683041854351	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	False	NA	-26	True	AGTAAA	-10	NA	23747073	23731368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_23732648_23734746_23736084_23740264_23740418_23746689_23746823_23747035
ES.32633.1	chr8	-	175	1	Intergenic	novelGene_26638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	23895695	23895520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_23895500_23895700
ES.32634.1	chr8	+	3619	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-3407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	586	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGTTGTGATTGAC	NA	False	NA	24	True	ACTAAA	-17	NA	23898110	23939648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23898185_23907345_23907424_23936181
ES.32634.10	chr8	+	4282	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCGTGAGTTGTGATTG	NA	False	NA	22	True	ACTAAA	-15	NA	23901514	23939646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23939189_23939279
ES.32634.11	chr8	+	2638	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-3	-1654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	602.571710808487	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTCTTCCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	23901514	23937994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937540_23937622
ES.32634.12	chr8	+	4364	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	586	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901514	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902337_23907345_23907424_23936181
ES.32634.13	chr8	+	4025	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901515	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23936382_23936727
ES.32634.14	chr8	+	4765	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	-392	-1	392	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGACTTTGGGTCACTG	NA	False	NA	NA	False	AATAAA	-23	NA	23901516	23940040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.15	chr8	+	1187	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	3186	-1	-3186	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCACGAGTGTCCCAC	NA	False	NA	NA	False	AAGAAA	-34	NA	23901516	23936462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.16	chr8	+	2644	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901516	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937022_23938745
ES.32634.18	chr8	+	4226	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	147	-1	-147	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTCTCATTCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	23901516	23939501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.19	chr8	+	3116	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	1257	-1	-1257	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGTCTCCTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	23901516	23938391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.2	chr8	+	3388	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-659	1643	-659	-1643	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAAAGTCTGATAATTC	NA	False	NA	NA	False	AAAAAG	-11	NA	23900858	23938005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.20	chr8	+	3987	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901516	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23938263_23938643
ES.32634.21	chr8	+	2749	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-1654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	586	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTCTTCCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	23901516	23937994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907315_23907424_23936181
ES.32634.22	chr8	+	4309	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	586	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGTTGTGATTGAC	NA	False	NA	24	True	ACTAAA	-17	NA	23901516	23939648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902323_23907387_23907424_23936181
ES.32634.23	chr8	+	4273	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901516	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937567_23937663
ES.32634.24	chr8	+	4130	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901516	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23901578_23901817_23902345_23907345_23907424_23936181
ES.32634.25	chr8	+	3955	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	418	-1	-418	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGTTTTATCTTGTT	NA	False	NA	NA	False	NA	NA	NA	23901516	23939230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.26	chr8	+	4292	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGCGTGAGTTGTGAT	NA	False	NA	20	True	ACTAAA	-13	NA	23901516	23939644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937663_23937739
ES.32634.27	chr8	+	2654	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-1654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	602.571710808487	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTCTTCCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	23901516	23937994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23901667_23901731_23902345_23907345_23907424_23936181
ES.32634.28	chr8	+	4313	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	681.5	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901516	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907399_23936213
ES.32634.29	chr8	+	5803	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-1	-1430	-1	1430	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTATTTCCTGCAGCCAG	NA	False	NA	NA	False	AATAAA	-13	NA	23901516	23941078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.3	chr8	+	4841	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-451	-18	-451	18	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAACCCCTGTCATCCAC	NA	False	NA	42	True	ACTAAA	-35	NA	23901066	23939666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.30	chr8	+	4437	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-1	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	548.062648487075	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCAGGTGTGTTTTGTT	NA	False	NA	-49	True	NA	NA	NA	23901516	23939575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23903505_23903643_23907345_23907424_23936181
ES.32634.31	chr8	+	2532	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	1	-1654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTCTTCCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	23901518	23937994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937289_23937473
ES.32634.32	chr8	+	4327	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23901518	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23937623_23937663
ES.32634.33	chr8	+	2003	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901522	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23936931_23939289
ES.32634.34	chr8	+	3727	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	829	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	586	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23902346	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902532_23907345_23907424_23936181
ES.32634.35	chr8	+	7126	1	NIC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	29351	-1654	mono-exon	FALSE	NA	NA	NA	NA	NA	1022	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTTCTTCCACCAAAG	NA	False	NA	NA	False	NA	NA	NA	23930868	23937994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_23930900_23938000
ES.32634.36	chr8	+	3051	2	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	34941	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCGTGAGTTGTGATT	NA	False	NA	21	True	ACTAAA	-14	NA	23936458	23939645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23936956_23937091
ES.32634.4	chr8	+	1769	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-273	-5	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	594.626119693898	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901244	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23936382_23939252
ES.32634.5	chr8	+	1592	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-241	3021	-241	-3021	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCTGTTCCTACAGC	NA	False	NA	16	True	GGGGCT	-45	NA	23901276	23936627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32634.6	chr8	+	1541	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-82	-5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	596.495506176609	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901435	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23936382_23939289
ES.32634.7	chr8	+	1998	3	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-32	27285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	681.5	1041	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCGCTGCTCAGTCATGG	NA	False	NA	NA	False	NA	NA	NA	23901485	23966933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23965872
ES.32634.8	chr8	+	1594	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	602.571710808487	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCGTGAGTTGTGA	NA	False	NA	19	True	ACTAAA	-12	NA	23901501	23939643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_23902345_23907345_23907424_23936181_23936501_23939289
ES.32634.9	chr8	+	1574	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	-4	2802	-4	-2802	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTGCAGACGGACAG	NA	False	NA	NA	False	AAAACA	-44	NA	23901513	23936846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_23902345_23907345_23907424_23936181
ES.32635.1	chr8	+	2507	1	Intergenic	novelGene_26639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTAAACATCCAGATAG	NA	False	NA	NA	False	NA	NA	NA	23970213	23972720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_23970200_23972700
ES.32636.1	chr8	-	175	1	Intergenic	novelGene_26640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	24143628	24143453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_24143500_24143600
ES.32637.1	chr8	-	164	1	Intergenic	novelGene_26641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGATACAA	NA	False	NA	NA	False	NA	NA	NA	24181154	24180990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_24181000_24181200
ES.32638.1	chr8	+	3427	2	NNC	ENSMUSG00000037492.17	novel	4182	7	NA	NA	115472	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGCTGCCTTAATGT	NA	False	NA	NA	False	NA	NA	NA	24534540	24553127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_24534602_24549761
ES.32639.1	chr8	-	176	1	Intergenic	novelGene_26642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAGAAAAAAAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	24727203	24727027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_24727000_24727200
ES.3264.1	chr10	-	177	1	Intergenic	novelGene_2550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	79562863	79562686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79562700_79562900
ES.32640.1	chr8	-	2068	1	Intergenic	novelGene_26643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCATAGACTACCCAAG	NA	False	NA	NA	False	NA	NA	NA	24995479	24993411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_24993400_24995500
ES.32641.1	chr8	-	2816	8	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	6	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	2.44114392723358	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAGCTCAAAGTCTTA	8238	False	NA	NA	False	AATAAA	-20	NA	25044607	25021906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736_25043857_25044528
ES.32641.10	chr8	-	2194	5	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	-20	-6247	intron_retention	FALSE	non_canonical	0	0	junction_3	2.06155281280883	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTGTGTCTAGAACTGA	8212	False	NA	NA	False	NA	NA	NA	25044633	25029718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736
ES.32641.2	chr8	-	2819	8	NNC	ENSMUSG00000031549.17	novel	3205	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.25876975726313	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTAGCTCAAAGTCTT	8212	False	NA	NA	False	AATAAA	-19	NA	25044633	25021907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736_25043857_25044550
ES.32641.3	chr8	-	2920	8	NNC	ENSMUSG00000031549.17	novel	3205	9	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.47435829652697	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCTAGCTCAAAGTCT	8212	False	NA	NA	False	AATAAA	-18	NA	25044633	25021908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037256_25040766_25040904_25043635_25043857_25044550
ES.32641.4	chr8	-	2836	8	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.25876975726313	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCTAGCTCAAAGTCT	8185	False	NA	NA	False	AATAAA	-18	NA	25044660	25021908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037256_25040776_25040904_25043736_25043857_25044550
ES.32641.6	chr8	-	2909	8	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	-3724	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.25876975726313	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCTAGCTCAAAGTCT	6540	False	NA	NA	False	AATAAA	-18	NA	25048337	25021908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736_25043857_25048163
ES.32641.7	chr8	-	3037	9	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	-8940	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.3946555075835	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACATTTCTAGCTCAAAGT	1324	False	NA	NA	False	AATAAA	-16	NA	25053553	25021910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043622_25043857_25048163_25048260_25053459
ES.32641.8	chr8	-	2900	7	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	124	136	intron_retention	FALSE	non_canonical	0	0	junction_5	2.16024689946929	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGGCTCTAGATTCTT	8399	False	NA	NA	False	NA	NA	NA	25044446	25022333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736
ES.32641.9	chr8	-	2236	8	NNC	ENSMUSG00000031549.17	novel	2452	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.44114392723358	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGTCTCTTCCCTTTT	8241	False	NA	NA	False	NA	NA	NA	25044604	25022470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037259_25040770_25040904_25043736_25043857_25044541
ES.32642.1	chr8	+	1723	1	Intergenic	novelGene_26644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-25	NA	25443527	25445250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25443500_25445200
ES.32643.1	chr8	+	3055	1	Intergenic	novelGene_26645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCAAGGAAAACCCGCC	NA	False	NA	NA	False	NA	NA	NA	25503320	25506375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25503300_25506400
ES.32644.1	chr8	-	4174	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	-189	0	-184	0	multi-exon	FALSE	non_canonical	0	0	junction_2	31.0462313449736	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25507127	25439626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.10	chr8	-	3886	21	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.6392359672275	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25506906	25439627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.14	chr8	-	3878	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	-46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.53115870481	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25506881	25439628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453100_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469494_25469532_25471966_25472139_25480282_25480417_25481280_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.17	chr8	-	4057	23	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.7009577060124	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25506921	25439628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25501453_25501545_25506700
ES.32644.2	chr8	-	3871	23	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4517499140345	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506932	25439626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25439864_25439970_25441027_25445947_25446016_25452928_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463149_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.20	chr8	-	3806	22	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	-137	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.1816514973394	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25507080	25439628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25507019
ES.32644.21	chr8	-	4060	23	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.170999482242	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTCGTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	25506893	25439628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25484029_25484178_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493327_25494794_25494854_25496192_25496291_25506700
ES.32644.22	chr8	-	3926	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	-46	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.3638865640518	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTTTGTCGTCCTCT	NA	False	NA	NA	False	AATAAA	-30	NA	25506881	25439631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455048_25456660_25456771_25457164_25457246_25460625_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.25	chr8	-	4127	23	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.1780911211991	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTTGTTTTGTCGTCC	NA	False	NA	NA	False	AATAAA	-27	NA	25506940	25439634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25484029_25484178_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.27	chr8	-	3906	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	36	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.7413976202053	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAATTCTTGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	25506902	25439640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469494_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.28	chr8	-	2873	13	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	6468	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.8120405085339	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAATTCTTGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	25481338	25439640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454951_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266
ES.32644.30	chr8	-	3913	21	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	17	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.7702297756878	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAATTCTTGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	25506921	25439640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.33	chr8	-	3727	23	NNC	ENSMUSG00000031555.16	novel	3834	23	NA	NA	15	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.0159958720048	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATACTTGAAATTC	NA	False	NA	NA	False	AATAAA	-13	NA	25506923	25439648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25440324_25440571_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.34	chr8	-	3788	21	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	6	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	40.7700870737358	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATACTTGAAATTC	NA	False	NA	NA	False	AATAAA	-13	NA	25506932	25439648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.37	chr8	-	3793	21	NIC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	17	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_2	40.761992100485	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACATTTACAAC	NA	False	NA	NA	False	TTTAAA	-30	NA	25506921	25439668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25441027_25445947_25446016_25452929_25453105_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.39	chr8	-	2667	12	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	7454	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	47.6752096989065	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACATTTACAAC	NA	False	NA	NA	False	TTTAAA	-30	NA	25480352	25439668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463099_25468466_25468640_25469438_25469532_25471966_25472139_25480282
ES.32644.4	chr8	-	4138	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.0462313449736	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25507064	25439626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.41	chr8	-	4309	21	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	17	-11398	at_least_one_novel_splicesite	TRUE	canonical	1	49	junction_1	23.4070502199658	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATTCTTCTGTCATGGG	NA	False	NA	NA	False	NA	NA	NA	25506921	25451066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25452893_25452946_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.42	chr8	-	3362	19	ISM	ENSMUSG00000031555.16	ENSMUST00000084032.6	3834	23	-52	14172	-45	-14172	5prime_fragment	FALSE	canonical	3	95	junction_10	17.5886642787652	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTGCAGGCATGTGGT	NA	False	NA	NA	False	ATTAAA	-44	NA	25506880	25453840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.5	chr8	-	4140	23	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.1780911211991	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506918	25439626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25484029_25484178_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.6	chr8	-	4013	23	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	-33	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	45.3916155289782	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506868	25439626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25484029_25484101_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.7	chr8	-	3962	22	NNC	ENSMUSG00000031555.16	novel	4044	22	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.9326530554301	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25506888	25439627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452902_25453100_25454912_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.8	chr8	-	3955	22	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.8658180238662	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25506923	25439627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481280_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32644.9	chr8	-	3947	22	NNC	ENSMUSG00000031555.16	novel	3985	22	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.4573738829828	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCGTCCTCTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	25506900	25439627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456765_25457157_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ES.32645.1	chr8	+	1283	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	-3	1	-3	1	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCTGTGTGAGTATTT	NA	False	NA	13	True	AATAAA	-13	NA	25507223	25513275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ES.32645.3	chr8	+	3220	3	ISM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	70	2	22	0	intron_retention	FALSE	canonical	3	225	junction_1	3.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCTGTGTGAGTATT	NA	False	NA	12	True	AATAAA	-12	NA	25507296	25513274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_25507609_25508081_25508170_25510454
ES.32645.4	chr8	+	3112	2	ISM	ENSMUSG00000031556.7	ENSMUST00000210536.2	727	3	-6	-368	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCTGTGTGAGTATT	NA	False	NA	12	True	AATAAA	-12	NA	25507316	25513274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_25507609_25510454
ES.32646.1	chr8	+	2333	1	Intergenic	novelGene_26647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGAGGGAGGGGAGAGA	1181	False	NA	NA	False	NA	NA	NA	25575249	25577582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25575200_25577600
ES.32647.1	chr8	+	6720	1	FSM	ENSMUSG00000110148.2	ENSMUST00000210097.2	2989	1	-4757	1026	62	-408	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGGCAGAAACATCG	NA	False	NA	NA	False	NA	NA	NA	25592256	25598976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_25592300_25599000
ES.32648.1	chr8	-	4960	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	199	-1696	-15	0	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTTTTCCTG	5810	False	NA	NA	False	AATAAA	-19	NA	25591802	25529159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ES.32648.10	chr8	-	3289	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	181	-7	-33	7	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	5792	False	NA	27	True	NA	NA	NA	25591820	25530848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ES.32648.11	chr8	-	3051	10	NIC	ENSMUSG00000031557.17	novel	3463	12	NA	NA	58	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	61.5806206489198	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	5883	False	NA	27	True	NA	NA	NA	25591729	25530848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25562014_25562072_25578357_25578522_25591675
ES.32648.13	chr8	-	3212	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-26	-15	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8149	False	NA	5	True	NA	NA	NA	25581388	25530870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
ES.32648.14	chr8	-	3264	12	FSM	ENSMUSG00000031557.17	ENSMUST00000098866.11	1158	12	-17	-2089	-17	-15	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5808	False	NA	5	True	NA	NA	NA	25591804	25530870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591662
ES.32648.15	chr8	-	3242	13	NNC	ENSMUSG00000031557.17	novel	3463	12	NA	NA	31	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.8854237144786	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGGCTTCTTTCTCTTTC	5856	False	NA	-46	True	AAGAAA	-15	NA	25591756	25530921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25578597_25578688_25591675
ES.32648.16	chr8	-	2050	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	184	1229	-30	875	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTCGTCCTCTTGAT	5795	False	NA	NA	False	ATTAAA	-21	NA	25591817	25532084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ES.32648.17	chr8	-	7474	1	Intergenic	novelGene_26646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25577173	25569699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25569700_25577200
ES.32648.2	chr8	-	4931	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTTTTCCTG	8141	False	NA	NA	False	AATAAA	-19	NA	25581396	25529159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
ES.32648.3	chr8	-	4985	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	191	0	-31	0	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTTTTCCTG	9879	False	NA	NA	False	AATAAA	-19	NA	25592201	25529159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
ES.32648.4	chr8	-	2985	5	ISM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	44196	-516	33557	516	3prime_fragment	FALSE	canonical	3	139	junction_1	10.917302780449	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAAGTCTCAATTCTT	8367	False	NA	NA	False	AATATA	-24	NA	25547805	25530339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748
ES.32648.5	chr8	-	3450	12	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-20	229	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	41.1584320513503	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATGAGGTCATCTTT	8155	False	NA	NA	False	AATAAA	-39	NA	25581382	25530626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25581298
ES.32648.7	chr8	-	3374	11	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-34	7	combination_of_known_splicesites	FALSE	canonical	3	3	junction_5	52.5281829116523	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	9654	False	NA	27	True	NA	NA	NA	25592426	25530848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
ES.32648.8	chr8	-	3778	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	-291	1689	-291	7	multi-exon	FALSE	canonical	3	27	junction_11	35.6008635794598	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	9397	False	NA	27	True	NA	NA	NA	25592683	25530848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
ES.32648.9	chr8	-	3120	10	NIC	ENSMUSG00000031557.17	novel	5176	12	NA	NA	-2	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	56.4343823052298	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTTTTGGTTTT	9908	False	NA	27	True	NA	NA	NA	25592172	25530848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25562014_25562072_25578357_25578522_25592049
ES.32649.1	chr8	+	2671	1	Intergenic	novelGene_26649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCC	1607	False	NA	NA	False	NA	NA	NA	25675592	25678263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25675600_25678300
ES.3265.1	chr10	-	3824	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	-45	-24	-43	17	multi-exon	TRUE	canonical	3	126	junction_16	17.3118456555042	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGTTTATTGCGC	4664	False	NA	17	True	NA	NA	NA	79582458	79571939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.10	chr10	-	4295	20	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	14	-2	intron_retention	FALSE	canonical	2	4	junction_13	47.5060573481376	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTGCGCTCGGCGCCA	4731	False	NA	-2	True	NA	NA	NA	79582391	79571958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573294_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576330_79576412_79576584_79576666_79576832_79576960_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.11	chr10	-	3875	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	46.3571731234768	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTGCGCTCGGCGCCA	4720	False	NA	-2	True	NA	NA	NA	79582402	79571958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573294_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576330_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.12	chr10	-	3719	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	37.0120250729408	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGCTGCGCTCGGCGC	4730	False	NA	-4	True	NA	NA	NA	79582392	79571960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576684_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.13	chr10	-	3543	20	FSM	ENSMUSG00000020329.13	ENSMUST00000159016.8	3535	20	-5	-3	-5	0	multi-exon	TRUE	canonical	2	8	junction_12	36.3934333975215	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGCTGCGCTCGGCGC	4702	False	NA	-4	True	NA	NA	NA	79582420	79571960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.15	chr10	-	3774	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	35.9016364529529	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGACGCTGCGCTCGGC	4715	False	NA	-6	True	NA	NA	NA	79582407	79571962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574309_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.16	chr10	-	3707	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	36.8923772614344	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGACGCTGCGCTCGGC	4716	False	NA	-6	True	NA	NA	NA	79582406	79571962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577911_79579011_79579563_79581507_79581607_79582298
ES.3265.17	chr10	-	3844	22	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.4046602567612	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4718	False	NA	-7	True	NA	NA	NA	79582404	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581181_79581280_79581507_79581607_79582298
ES.3265.18	chr10	-	6605	15	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_13	43.7043055834389	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4717	False	NA	-7	True	NA	NA	NA	79582405	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572278_79572356_79572449_79572567_79572641_79573097_79573344_79573433_79573548_79573633_79573721_79573864_79575766_79575977_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79580866_79581028_79581607_79582298
ES.3265.19	chr10	-	3682	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.9974323433397	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4731	False	NA	-7	True	NA	NA	NA	79582391	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577060_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.20	chr10	-	3174	9	NIC	ENSMUSG00000020329.13	novel	3535	20	NA	NA	-1250	0	intron_retention	FALSE	canonical	1	1	junction_5	55.9480786086529	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	NA	False	NA	-7	True	NA	NA	NA	79576459	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573433_79573548_79573633_79573721_79573864_79574045_79574161
ES.3265.21	chr10	-	1528	9	ISM	ENSMUSG00000020329.13	ENSMUST00000162694.8	3749	20	7731	-44	-209	0	intron_retention	FALSE	canonical	3	141	junction_6	10.9992897497975	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	NA	False	NA	-7	True	NA	NA	NA	79574674	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573721_79573864_79574045_79574161
ES.3265.22	chr10	-	4706	16	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	126	junction_11	18.0357669337594	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4713	False	NA	-7	True	NA	NA	NA	79582409	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79573548_79573633_79573721_79573864_79574045_79574161_79574639_79574976_79575766_79575977_79576200_79576412_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.23	chr10	-	3830	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_15	17.7600192158814	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4717	False	NA	-7	True	NA	NA	NA	79582405	79571963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.24	chr10	-	3222	4	NIC	ENSMUSG00000020329.13	novel	3935	19	NA	NA	-657	-1	intron_retention	FALSE	canonical	3	161	junction_1	4.98887651569859	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGACGCTGCGCTCG	NA	False	NA	-8	True	NA	NA	NA	79575866	79571964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572278_79572356_79572641_79573097_79573721_79573864
ES.3265.25	chr10	-	3632	20	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	48.7555380759437	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGACGCTGCGCTCG	4711	False	NA	-8	True	NA	NA	NA	79582411	79571964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577114_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.26	chr10	-	3828	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	11	-1	intron_retention	FALSE	canonical	3	126	junction_16	17.248870853084	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGACGCTGCGCTCG	4728	False	NA	-8	True	NA	NA	NA	79582394	79571964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.28	chr10	-	4172	19	NIC	ENSMUSG00000020329.13	novel	3535	20	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	126	junction_14	18.0548717819244	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGACGCTGCGCTCG	4716	False	NA	-8	True	NA	NA	NA	79582406	79571964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.3	chr10	-	3839	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	14	13	intron_retention	FALSE	canonical	3	126	junction_15	15.4799486066416	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAATGCTGTCGTTTATT	4731	False	NA	13	True	NA	NA	NA	79582391	79571943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.30	chr10	-	3927	18	NIC	ENSMUSG00000020329.13	novel	3535	20	NA	NA	0	-4	intron_retention	FALSE	canonical	1	2	junction_15	55.3098225506847	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGAGACGCTGCGC	4715	False	NA	-11	True	NA	NA	NA	79582407	79571967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572278_79572356_79572449_79572567_79572641_79573097_79573344_79573433_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
ES.3265.33	chr10	-	5754	14	NIC	ENSMUSG00000020329.13	novel	4288	17	NA	NA	4	-4	intron_retention	FALSE	canonical	3	126	junction_10	16.3912951353155	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGAGACGCTGCGC	4721	False	NA	-11	True	NA	NA	NA	79582401	79571967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573721_79573864_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79579563_79581507_79581607_79582298
ES.3265.34	chr10	-	3863	22	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.3790620284635	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGAGACGCTGCGC	4724	False	NA	-11	True	NA	NA	NA	79582398	79571967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573304_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
ES.3265.35	chr10	-	3932	19	FSM	ENSMUSG00000020329.13	ENSMUST00000159082.8	3935	19	-3	6	-3	-4	multi-exon	FALSE	canonical	3	126	junction_14	18.0387100904803	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGAGACGCTGCGC	4712	False	NA	-11	True	NA	NA	NA	79582410	79571967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.36	chr10	-	3756	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	37.2054767473822	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAATGAGACGCTGCG	4698	False	NA	-12	True	NA	NA	NA	79582424	79571968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576575_79576662_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.37	chr10	-	4653	16	NIC	ENSMUSG00000020329.13	novel	3749	20	NA	NA	0	1	intron_retention	FALSE	canonical	3	126	junction_11	15.6710632128845	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCGCCACTTTCTGG	4717	False	NA	-48	True	AATAAA	-21	NA	79582405	79572004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572278_79572356_79572449_79572567_79573197_79573290_79573721_79573864_79574045_79574161_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.38	chr10	-	4028	19	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_14	17.2451460338379	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGCCGCCACTTTCTG	4715	False	NA	-49	True	AATAAA	-20	NA	79582407	79572005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573548_79573633_79573721_79573864_79574045_79574161_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.39	chr10	-	4019	19	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	126	junction_14	17.4477173150579	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAGCCGCCACTTTCT	4716	False	NA	-50	True	AATAAA	-19	NA	79582406	79572006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.4	chr10	-	3993	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-1	7	intron_retention	FALSE	canonical	3	126	junction_15	16.9899758616189	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGCGCCAATGCTGTCG	4716	False	NA	7	True	NA	NA	NA	79582406	79571949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.40	chr10	-	1079	10	NIC	ENSMUSG00000020329.13	novel	3535	20	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	53.0103646981616	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAGCCGCCACTTTCT	NA	False	NA	-50	True	AATAAA	-19	NA	79574638	79572006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515
ES.3265.41	chr10	-	4368	18	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	126	junction_13	17.812557290626	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAGCCGCCACTTTCT	4716	False	NA	-50	True	AATAAA	-19	NA	79582406	79572006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.42	chr10	-	3055	17	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-2745	0	intron_retention	FALSE	canonical	0	0	junction_5	39.4841245787468	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAGCCGCCACTTTCT	9168	False	NA	-50	True	AATAAA	-19	NA	79577954	79572006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573217_79573290_79573344_79573433_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821
ES.3265.43	chr10	-	3846	22	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_19	44.9978583516574	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCAGCCGCCACTTTC	4715	False	NA	-51	True	AATAAA	-18	NA	79582407	79572007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
ES.3265.44	chr10	-	3737	21	NNC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1947576951376	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGCCAGCCGCCACTT	4703	False	NA	-53	True	AATAAA	-16	NA	79582419	79572009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79572140_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.47	chr10	-	3605	19	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	877	-3	intron_retention	FALSE	canonical	3	126	junction_15	17.0843947276418	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATGCCAGCCGCCACT	5594	False	NA	-54	True	AATAAA	-15	NA	79581528	79572010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507
ES.3265.48	chr10	-	3784	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	126	junction_15	17.6049287986501	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATGCCAGCCGCCACT	4712	False	NA	-54	True	AATAAA	-15	NA	79582410	79572010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.49	chr10	-	3752	15	NIC	ENSMUSG00000020329.13	novel	3935	19	NA	NA	2974	-3	intron_retention	FALSE	canonical	3	126	junction_12	15.4624297797558	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATGCCAGCCGCCACT	7691	False	NA	-54	True	AATAAA	-15	NA	79579431	79572010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572641_79573097_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
ES.3265.50	chr10	-	753	3	NNC	ENSMUSG00000020329.13	novel	4288	17	NA	NA	-1	-1208	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	63.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAAGTGTTTTACTAC	4714	False	NA	NA	False	AATAAA	-30	NA	79582408	79580708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79580808_79581062_79581607_79582298
ES.3265.6	chr10	-	3637	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	37.8295491942974	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTCGGCGCCAATGCTG	4715	False	NA	4	True	NA	NA	NA	79582407	79571952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.7	chr10	-	5012	12	NIC	ENSMUSG00000020329.13	novel	4288	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	126	junction_7	17.2142550960649	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGCGCTCGGCGCCAAT	4721	False	NA	0	True	NA	NA	NA	79582401	79571956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572449_79572567_79572641_79573097_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.3265.9	chr10	-	4091	20	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	126	junction_15	17.684993716993	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCTGCGCTCGGCGCCA	4716	False	NA	-2	True	NA	NA	NA	79582406	79571958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ES.32650.1	chr8	+	168	1	Intergenic	novelGene_26651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAGAAATAAG	1340	False	NA	NA	False	NA	NA	NA	25689034	25689202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25689000_25689200
ES.32651.1	chr8	+	221	1	Intergenic	novelGene_26652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGATTTATTTTAT	7058	False	NA	NA	False	NA	NA	NA	25701183	25701404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25701200_25701400
ES.32652.1	chr8	+	184	1	Intergenic	novelGene_26654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTCACACCTATCAGG	NA	False	NA	NA	False	NA	NA	NA	25705882	25706066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25705900_25706100
ES.32653.1	chr8	-	7618	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	-10	171	combination_of_known_splicesites	TRUE	canonical	3	6	junction_12	23.0523257443196	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACCTCGGCTGTAGAAAC	NA	False	NA	NA	False	AATAAA	-16	NA	25730889	25644396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
ES.32653.10	chr8	-	5654	13	NNC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	13	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.2877813752868	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25730866	25644570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25647451_25647521_25649333_25649802_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657532_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
ES.32653.11	chr8	-	6252	10	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	30.4448499567478	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	7773	False	NA	-3	True	AATAAA	-18	NA	25746615	25644570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25661287_25661341_25665157_25665282_25667949_25668011_25746377
ES.32653.12	chr8	-	7463	13	NNC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	166	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.1986856851542	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25730713	25644570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730614
ES.32653.14	chr8	-	5273	3	NNC	ENSMUSG00000065954.12	novel	3469	2	NA	NA	1322	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATCCGGGGTGTGTTGTC	NA	False	NA	-4	True	AATAAA	-17	NA	25651265	25644571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25649489_25649535_25649837_25651210
ES.32653.15	chr8	-	7570	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	24.1986856851542	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATCCGGGGTGTGTTGT	7803	False	NA	-5	True	AATAAA	-16	NA	25746585	25644572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25746377
ES.32653.16	chr8	-	4247	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-124	2348	-31	829	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTAGGGGCCAAAAGCTTC	NA	False	NA	NA	False	AGTAAA	-25	NA	25691589	25646915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ES.32653.17	chr8	-	5026	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	2	730	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	23.0523257443196	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAAAGTCTATTTATTT	NA	False	NA	NA	False	AATATA	-7	NA	25730915	25647014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
ES.32653.18	chr8	-	4748	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	11	461	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	23.0523257443196	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGCTGTGCTGTAT	NA	False	NA	NA	False	TTTAAA	-2	NA	25730906	25647283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
ES.32653.19	chr8	-	3488	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-1	413	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTATCTTCCCCTGTC	NA	False	NA	NA	False	NA	NA	NA	25730918	25647331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
ES.32653.2	chr8	-	7343	12	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	23.6838683460855	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	False	NA	0	True	AATAAA	-21	NA	25730901	25644567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25730809
ES.32653.20	chr8	-	4717	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-67	3138	-67	39	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAAGTTATCTGTGGTT	NA	False	NA	NA	False	AAAAAG	-31	NA	25691625	25647705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
ES.32653.21	chr8	-	3071	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-17	18	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCCCAACAACCCACAAGC	NA	False	NA	NA	False	AAAAAG	-10	NA	25730896	25647726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
ES.32653.22	chr8	-	2643	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-2	-395	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTAGTGACTTCTTTCC	NA	False	NA	NA	False	AATAGA	-14	NA	25730881	25648139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
ES.32653.23	chr8	-	1798	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-94	4767	-1	-1590	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCAGCAGTTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	25691559	25649334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ES.32653.24	chr8	-	3080	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-59	4767	-59	-1590	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCAGCAGTTTTACTGA	NA	False	NA	NA	False	NA	NA	NA	25691617	25649334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
ES.32653.25	chr8	-	2675	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	-14	-1637	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	23.0523257443196	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGTTTGATGTTTTT	NA	False	NA	NA	False	NA	NA	NA	25730931	25649381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
ES.32653.26	chr8	-	4052	4	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	91	20945	-2	-4215	5prime_fragment	FALSE	canonical	0	0	junction_3	15.3260852434302	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTCAACTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	25691467	25665512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_25668011_25671838_25672947_25690106_25690223_25691137
ES.32653.27	chr8	-	2257	2	Intergenic	novelGene_26648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25667948	25665550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25666074_25666214
ES.32653.28	chr8	-	6627	1	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-14628	-4253	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25672177	25665550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25665600_25672200
ES.32653.29	chr8	-	5170	3	ISM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-80	23826	-80	4144	5prime_fragment	FALSE	canonical	0	0	junction_2	16.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCAGCGTGGTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	25691638	25668393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_25672947_25690106_25690223_25691137
ES.32653.3	chr8	-	6271	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	False	NA	0	True	AATAAA	-21	NA	25730937	25644567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
ES.32653.30	chr8	-	4767	3	NIC	ENSMUSG00000065954.12	novel	515	3	NA	NA	10	4144	intron_retention	FALSE	canonical	3	6	junction_2	13.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCAGCGTGGTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	25730907	25668393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25672947_25690106_25690223_25730809
ES.32653.31	chr8	-	3088	1	Intergenic	novelGene_26650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACACCAGGACTGAGGA	NA	False	NA	NA	False	NA	NA	NA	25686593	25683505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25683500_25686600
ES.32653.32	chr8	-	2147	1	FSM	ENSMUSG00000065954.12	ENSMUST00000209633.2	1050	1	-1067	-30	-68	30	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCTCTCAGATAGCCC	NA	False	NA	NA	False	NA	NA	NA	25691626	25689479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25689500_25691600
ES.32653.33	chr8	-	1172	2	ISM	ENSMUSG00000065954.12	ENSMUST00000211622.2	1661	9	-101	31895	-8	30	5prime_fragment	FALSE	canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCTCTCAGATAGCCC	NA	False	NA	NA	False	NA	NA	NA	25691566	25689479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_25690223_25691137
ES.32653.34	chr8	-	820	2	NIC	ENSMUSG00000065954.12	novel	515	3	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-29	NA	25730915	25689508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25690223_25730809
ES.32653.35	chr8	-	1160	1	FSM	ENSMUSG00000065954.12	ENSMUST00000211218.2	943	1	-182	-35	-42	35	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCCTGGTGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	25691600	25690440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25690400_25691600
ES.32653.36	chr8	-	161	1	Intergenic	novelGene_26653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	25705012	25704851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25704900_25705000
ES.32653.4	chr8	-	7831	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	-44	1	-44	-1	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGGGGTGTGTTGTCTTC	NA	False	NA	-1	True	AATAAA	-20	NA	25691602	25644568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
ES.32653.5	chr8	-	15359	9	NNC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_2	29.6666374063526	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGGGGTGTGTTGTCTTC	NA	False	NA	-1	True	AATAAA	-20	NA	25730929	25644568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25649837_25651210_25651460_25651524_25657422_25657530_25657608_25659212_25659339_25661287_25664725_25665157_25665282_25667949_25668011_25730809
ES.32653.6	chr8	-	6600	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	-131	2	-38	-2	multi-exon	FALSE	canonical	0	0	junction_10	23.6550206087418	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	25691596	25644569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ES.32653.7	chr8	-	6218	11	NNC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	-9385	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.6550206087418	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCGGGGTGTGTTGTCTT	NA	False	NA	-2	True	AATAAA	-19	NA	25700943	25644569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25700866
ES.32653.8	chr8	-	6528	12	NNC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	-14617	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.0681729333983	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25672166	25644570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25664664_25664725_25665157_25665282_25667949_25668011_25671838
ES.32653.9	chr8	-	7467	13	NIC	ENSMUSG00000065954.12	novel	7788	13	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	23.0523257443196	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCGGGGTGTGTTGTCT	NA	False	NA	-3	True	AATAAA	-18	NA	25730912	25644570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25730809
ES.32654.1	chr8	+	179	1	Intergenic	novelGene_26655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGTCCCATCTGTAA	1510	False	NA	NA	False	NA	NA	NA	25787110	25787289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25787100_25787300
ES.32655.1	chr8	+	180	1	Intergenic	novelGene_26656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGAAGGACATTTTTT	293	False	NA	NA	False	NA	NA	NA	25808949	25809129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25808900_25809100
ES.32656.1	chr8	-	162	1	Intergenic	novelGene_26657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	25906478	25906316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25906300_25906500
ES.32657.1	chr8	+	212	1	Intergenic	novelGene_26658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCATGACTTGATGAGG	953	False	NA	NA	False	AAAACA	-10	NA	25911170	25911382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_25911200_25911400
ES.32658.1	chr8	-	183	1	Intergenic	novelGene_26659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTATATCTGTGC	NA	False	NA	NA	False	NA	NA	NA	25935979	25935796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25935800_25936000
ES.32659.1	chr8	+	442	1	FSM	ENSMUSG00000074412.5	ENSMUST00000098864.5	432	1	65	-75	65	75	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACATTGGGAATTCATC	NA	False	NA	NA	False	NA	NA	NA	25944353	25944795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_25944400_25944800
ES.3266.1	chr10	+	2202	4	NNC	ENSMUSG00000020327.5	novel	2167	3	NA	NA	-26	1236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.471404520791032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79590944	79595666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79591140_79592413_79592518_79592597_79593023_79594188
ES.3266.2	chr10	+	1319	3	FSM	ENSMUSG00000020327.5	ENSMUST00000219228.2	2167	3	47	801	-14	273	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATGGTTGCTTGTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	79590956	79593629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79591140_79592413_79592518_79592597
ES.3266.3	chr10	+	2671	1	NIC	ENSMUSG00000020327.5	novel	2167	3	NA	NA	-14	271	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCATGGTTGCTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	79590956	79593627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79591000_79593600
ES.3266.4	chr10	+	1708	1	Genic_Genomic	ENSMUSG00000020327.5	novel	NA	NA	NA	NA	2937	1185	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCCCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79593907	79595615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_79593900_79595600
ES.32660.1	chr8	-	182	1	Intergenic	novelGene_26660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAGTTAATAGGT	NA	False	NA	NA	False	NA	NA	NA	25956836	25956654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25956700_25956800
ES.32661.1	chr8	-	168	1	Intergenic	novelGene_26661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAATTGTTATACAGAG	NA	False	NA	NA	False	NA	NA	NA	25960950	25960782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_25960800_25961000
ES.32662.1	chr8	+	4210	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-119	5	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26008655	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.10	chr8	+	5010	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCTACTTGACTCAC	NA	False	NA	77	True	NA	NA	NA	26008779	26065730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.11	chr8	+	4079	19	NNC	ENSMUSG00000031565.19	novel	5041	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.2833331713732	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008779	26064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045487_26045791_26047746_26047831_26048086_26048270_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760_26064527_26064568
ES.32662.12	chr8	+	5011	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-31	-934	5	1	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTCTACTTGACTCACT	NA	False	NA	78	True	NA	NA	NA	26008779	26065731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.13	chr8	+	4079	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	6	5	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26008780	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.14	chr8	+	3823	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	6	-43	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGAGTATATATTTA	NA	False	NA	NA	False	AAGAAA	-15	NA	26008780	26064550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.17	chr8	+	4026	18	NNC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	72.6896993221409	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008783	26064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054450_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.18	chr8	+	8317	16	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-4	1	intron_retention	FALSE	non_canonical	0	0	junction_7	67.7011734675913	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTATCCTGGGCGTG	NA	False	NA	12	True	AATAAA	-15	NA	26008783	26064798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.19	chr8	+	3953	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-2	92	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTTAAAAGGTCATAT	NA	False	NA	NA	False	NA	NA	NA	26008785	26064685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.2	chr8	+	4111	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-56	-9	-20	5	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26008754	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.20	chr8	+	4518	18	NNC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	81.197993736614	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCCTGGGCGTGTG	NA	False	NA	14	True	AATAAA	-17	NA	26008798	26064800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054345_26054501_26056726_26057371_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.22	chr8	+	3933	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-5	118	1	86	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGTTTTTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26008805	26064679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.24	chr8	+	4022	19	NNC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	3	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101.249493216229	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACGAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	26008807	26064649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26039109_26039239_26045523_26045788_26047751_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.25	chr8	+	3805	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	3	-40	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAGTATATATTTACAT	NA	False	NA	NA	False	TATAAA	-1	NA	26008807	26064553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.26	chr8	+	3873	18	NNC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-2	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	74.2547285085762	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACGAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	26008808	26064649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062456_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.28	chr8	+	3613	17	NNC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-2	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.2041557391914	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGTTTTTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26008808	26064679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048211_26052297_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.29	chr8	+	4093	18	NNC	ENSMUSG00000031565.19	novel	5041	18	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	82.9101318621429	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26008808	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045487_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.3	chr8	+	4001	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-15	-94	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTTTTGCTACTTT	NA	False	NA	-85	True	TTTAAA	-6	NA	26008759	26064701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.31	chr8	+	5330	17	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-2	4	intron_retention	FALSE	canonical	3	96	junction_4	41.63513390155	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGGCGTGTGAAAAG	NA	False	NA	19	True	AATAAA	-22	NA	26008808	26064805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.32	chr8	+	4554	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	-1	-507	-1	-426	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCACCTGCTGGTTGC	NA	False	NA	NA	False	NA	NA	NA	26008809	26065304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.33	chr8	+	2885	13	NNC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-1	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.3916783169471	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTAAAAACAAACGAACAG	NA	False	NA	NA	False	NA	NA	NA	26008809	26064645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045596_26056824_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.34	chr8	+	3659	17	NIC	ENSMUSG00000031565.19	novel	3789	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	83.4456924816973	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008809	26064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022314_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.35	chr8	+	4007	18	NNC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	82.2344104976511	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGGCGTGTGAAAAG	NA	False	NA	19	True	AATAAA	-22	NA	26008809	26064805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060220_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.37	chr8	+	4033	18	NNC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	90.5779214907899	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTTATCCTGGGC	NA	False	NA	9	True	AATAAA	-12	NA	26008809	26064795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060912_26062353_26062464_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.38	chr8	+	3643	17	NNC	ENSMUSG00000031565.19	novel	5041	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.4943294296428	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008809	26064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009446_26045746_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.4	chr8	+	5042	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	-15	-2	-15	2	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTGACTCACTGCTGT	NA	False	NA	83	True	NA	NA	NA	26008759	26065736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.40	chr8	+	4657	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	50	-661	50	-272	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCATCTGTAGGGGTT	NA	False	NA	NA	False	AATACA	-14	NA	26008860	26065458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.42	chr8	+	5482	17	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	30	6	intron_retention	FALSE	canonical	3	61	junction_8	57.1565490014049	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGGCGTGTGAAAAGAG	NA	False	NA	21	True	AATAAA	-24	NA	26009389	26064807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.43	chr8	+	3599	18	NNC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	216	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	81.0745737280827	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTATCCTGGGCGT	NA	False	NA	11	True	AATAAA	-14	NA	26009575	26064797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009758_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.44	chr8	+	3417	18	NNC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	244	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	82.9563190182153	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACGAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	26009603	26064649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009758_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.45	chr8	+	3572	18	NNC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	246	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.2204910480721	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26009605	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26009758_26022271_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.46	chr8	+	3626	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-172	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	81.2204910480721	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTATCCTGGGCGT	NA	False	NA	11	True	AATAAA	-14	NA	26021968	26064797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.47	chr8	+	3354	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-140	-30	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	83.0977246012792	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTACATGTCTTTTTAA	NA	False	NA	NA	False	TATAAA	-11	NA	26022000	26064563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.49	chr8	+	4427	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-124	-78	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	83.0977246012792	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCTTGGAGACCGTG	NA	False	NA	-1	True	AATGAA	-13	NA	26022016	26065652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.5	chr8	+	4108	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	-5	922	-5	11	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGTGTGAAAAGAGAGCAG	NA	False	NA	26	True	AATAAA	-29	NA	26008769	26064812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.50	chr8	+	3540	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-84	4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	83.0977246012792	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGGCGTGTGAAAAG	NA	False	NA	19	True	AATAAA	-22	NA	26022056	26064805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.51	chr8	+	4317	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	1	-69	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	81.2204910480721	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACCGTGTATCATAGT	NA	False	NA	8	True	AATGAA	-22	NA	26022141	26065661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.53	chr8	+	194	1	Intergenic	novelGene_26662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGCTTTGTTTGCTTG	NA	False	NA	NA	False	NA	NA	NA	26037477	26037671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26037500_26037700
ES.32662.54	chr8	+	3647	18	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7460	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.6239674831631	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTATCCTGGGCGTG	NA	False	NA	12	True	AATAAA	-15	NA	26038172	26064798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26039132_26039239_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.55	chr8	+	3532	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7431	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	82.2093364527412	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26038201	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.56	chr8	+	3526	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7431	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.1614659078013	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26038201	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.57	chr8	+	3273	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.2915167864216	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26038202	26064801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038240_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.58	chr8	+	4354	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7398	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.1614659078013	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTATCATAGTGGTTTT	NA	False	NA	14	True	AATGAA	-28	NA	26038234	26065667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.59	chr8	+	3405	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7373	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	89.9699385558865	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCCTGGGCGTGTG	NA	False	NA	14	True	AATAAA	-17	NA	26038259	26064800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054450_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.60	chr8	+	3412	18	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7368	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.8211209736468	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACGAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	26038264	26064649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26039132_26039239_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.62	chr8	+	4320	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7362	-67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.2093364527412	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCGTGTATCATAGTGG	NA	False	NA	10	True	AATGAA	-24	NA	26038270	26065663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.63	chr8	+	3581	18	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7352	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	102.407456746234	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCCTGGGCGTGTG	NA	False	NA	14	True	AATAAA	-17	NA	26038280	26064800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26039109_26039239_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056934_26058203_26058350_26059653_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.64	chr8	+	5372	16	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7260	5	intron_retention	FALSE	non_canonical	0	0	junction_7	84.854751716618	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	NA	False	NA	20	True	AATAAA	-23	NA	26038372	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.65	chr8	+	3698	19	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-7247	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.854267799302	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGGGCGTGTGAAAAG	NA	False	NA	19	True	AATAAA	-22	NA	26038385	26064805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26038931_26039018_26039109_26039239_26045387_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.66	chr8	+	3215	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7247	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.1614659078013	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGTTTTTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26038385	26064679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.67	chr8	+	4602	17	NNC	ENSMUSG00000031565.19	novel	1903	13	NA	NA	-6821	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	83.0932270103888	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCTACTTGACTCAC	NA	False	NA	77	True	NA	NA	NA	26038811	26065730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26039239_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056934_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.68	chr8	+	188	1	Intergenic	novelGene_26663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGTGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	26043955	26044143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26044000_26044100
ES.32662.69	chr8	+	173	1	Intergenic	novelGene_26664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAGGTGCATC	NA	False	NA	NA	False	NA	NA	NA	26046474	26046647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26046500_26046600
ES.32662.7	chr8	+	4902	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	4	56	intron_retention	FALSE	non_canonical	0	0	junction_9	81.0519078412463	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACGAACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	26008778	26064649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26053389_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.70	chr8	+	2766	14	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	2307	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.93804771503	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCCTGGGCGTGTG	NA	False	NA	14	True	AATAAA	-17	NA	26050396	26064800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26050452_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.71	chr8	+	2922	13	NIC	ENSMUSG00000031565.19	novel	3789	17	NA	NA	2308	86	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	54.768198396109	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGTTTTTTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	26050397	26064679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.72	chr8	+	3182	14	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	2324	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	103.738861952934	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTATCCTGGGCGTG	NA	False	NA	12	True	AATAAA	-15	NA	26050413	26064798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26050860_26052153_26052345_26053389_26053541_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.73	chr8	+	4715	9	FSM	ENSMUSG00000031565.19	ENSMUST00000120106.9	3386	9	-1323	-6	-473	5	multi-exon	FALSE	canonical	3	207	junction_2	21.8174242292714	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGGCGTGTGAAAAGA	1334	False	NA	20	True	AATAAA	-23	NA	26055542	26064806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.74	chr8	+	2042	9	NNC	ENSMUSG00000031565.19	novel	3386	9	NA	NA	-1298	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.3207232831882	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATCCTGGGCGTGTG	3995	False	NA	14	True	AATAAA	-17	NA	26058203	26064800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062471_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32662.75	chr8	+	145	1	FSM	ENSMUSG00000031565.19	ENSMUST00000210504.2	3324	1	3183	-4	-303	4	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATATTAAAAAAA	4990	False	NA	NA	False	NA	NA	NA	26059198	26059343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26059200_26059300
ES.32662.9	chr8	+	3988	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	5	1032	5	-93	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTTTGCTACTTTT	NA	False	NA	-84	True	TTTAAA	-7	NA	26008779	26064702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ES.32663.1	chr8	-	6012	2	NNC	ENSMUSG00000086134.2	novel	947	5	NA	NA	-4109	-10	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTATTAAATTTATT	9170	False	NA	NA	False	AATAAA	-10	NA	26050208	26038686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26044593_26050102
ES.32664.1	chr8	-	3340	9	NIC	ENSMUSG00000037363.10	novel	1617	9	NA	NA	10	0	intron_retention	TRUE	canonical	0	0	junction_6	4.44233891097922	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTCGAATGGCTTCC	2384	False	NA	NA	False	CATAAA	-15	NA	26087494	26068505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083766_26084183_26086377_26086462_26087290
ES.32664.2	chr8	-	1831	10	NIC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2.94392028877595	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTTCGAATGGCTT	2367	False	NA	NA	False	CATAAA	-13	NA	26087511	26068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087290
ES.32664.3	chr8	-	1997	11	NIC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	23	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	3.68239052790439	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTTCGAATGGCTT	2321	False	NA	NA	False	CATAAA	-13	NA	26087557	26068507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087290
ES.32664.4	chr8	-	3191	8	NIC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	24	-4	intron_retention	FALSE	canonical	0	0	junction_4	3.01695886884898	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTTCGAATGGC	2322	False	NA	NA	False	CATAAA	-11	NA	26087556	26068509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26076622_26077450_26082467_26082612_26083734_26084183_26086377
ES.32664.5	chr8	-	2107	11	NNC	ENSMUSG00000037363.10	novel	2126	11	NA	NA	-1	-7	intron_retention	FALSE	canonical	0	0	junction_10	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAAGTTGTGTTCGAAT	2373	False	NA	NA	False	CATAAA	-8	NA	26087505	26068512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26068821_26069735_26069811_26070331_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087123
ES.32664.6	chr8	-	1553	4	ISM	ENSMUSG00000037363.10	ENSMUST00000210810.2	1538	5	448	4555	-29	-6	5prime_fragment	FALSE	canonical	0	0	junction_3	3.85861230093008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGTGTTCAGGTTTT	2814	False	NA	NA	False	NA	NA	NA	26087064	26081675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26082612_26083734_26084183_26086377_26086462_26086979
ES.32664.7	chr8	-	3037	1	FSM	ENSMUSG00000037363.10	ENSMUST00000209734.2	1063	1	-20	-1954	5	-633	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	2354	False	NA	NA	False	NA	NA	NA	26087524	26084487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26084500_26087500
ES.32665.1	chr8	+	4206	10	NNC	ENSMUSG00000054823.18	novel	3652	10	NA	NA	-89	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.6997942382656	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAACAATCCTTACATAT	9596	False	NA	NA	False	AATAAA	-17	NA	26092210	26164923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26096627_26096768_26097986_26098155_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ES.32665.10	chr8	+	5049	25	NNC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.3592840447512	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGATCAGTGTAAAGCCT	9651	False	NA	NA	False	ATTAAA	-15	NA	26092265	26204717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172548_26172660_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.11	chr8	+	9643	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-34	496	-34	-496	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTATTTACCTGTAAT	9651	False	NA	NA	False	AATAAA	-20	NA	26092265	26209198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.12	chr8	+	5128	24	NIC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	32.8076827186655	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGATCAGTGTAAAGCC	9651	False	NA	NA	False	ATTAAA	-14	NA	26092265	26204716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196636_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.13	chr8	+	3741	7	NIC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	-34	-39	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	37.7657252015634	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAATT	9651	False	NA	NA	False	AAAAAG	-32	NA	26092265	26164893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ES.32665.14	chr8	+	3687	9	NNC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	-34	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.0936282465479	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAATT	9651	False	NA	NA	False	AAAAAG	-32	NA	26092265	26164893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26152954_26153079_26153273_26156045_26156173_26163349
ES.32665.15	chr8	+	4177	20	NNC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-34	-1318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	34.552781897296	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGTGCTGTTATTATC	9651	False	NA	NA	False	AGTAAA	-17	NA	26092265	26196789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181164_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551
ES.32665.16	chr8	+	2927	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	-34	759	-34	-1	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTAGTGCCGTTGTCA	9651	False	NA	NA	False	ATTAAA	-19	NA	26092265	26167229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ES.32665.17	chr8	+	4506	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	-69	-2021	-34	2021	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAATTACCTTTTTTTTT	9651	False	NA	NA	False	TATAAA	-16	NA	26092265	26155636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
ES.32665.19	chr8	+	3663	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	-32	187	-32	-187	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATGGGACAAATTG	9653	False	NA	NA	False	AATAAA	-15	NA	26092267	26164745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ES.32665.2	chr8	+	5206	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-75	4974	-75	1	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9610	False	NA	NA	False	ATTAAA	-18	NA	26092224	26204720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.20	chr8	+	3951	9	NNC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	-31	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.1642502063182	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAATT	9654	False	NA	NA	False	AAAAAG	-32	NA	26092268	26164893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26096627_26096768_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156044_26156173_26163349
ES.32665.21	chr8	+	6580	7	NIC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	-28	-39	intron_retention	FALSE	canonical	3	91	junction_5	10.5619863451699	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAAAAAATT	9657	False	NA	NA	False	AAAAAG	-32	NA	26092271	26164893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26156173_26163349
ES.32665.22	chr8	+	9891	26	NNC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-27	-549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.2187317123239	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCCACCCTCACCTTGT	9658	False	NA	NA	False	AATAAA	-12	NA	26092272	26209145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26096627_26096768_26097986_26098155_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.23	chr8	+	2750	6	NIC	ENSMUSG00000054823.18	novel	3652	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	41.4902398161302	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTCCACACT	9659	False	NA	-7	True	NA	NA	NA	26092273	26167966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ES.32665.25	chr8	+	10126	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-25	4	-25	-4	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAATATGGGCTGGTTC	9660	False	NA	15	True	AATAAA	-19	NA	26092274	26209690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.26	chr8	+	5080	24	NNC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.9360182671529	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCAGTGTAAAGCCTAA	9663	False	NA	NA	False	ATTAAA	-17	NA	26092277	26204719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26130664_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.27	chr8	+	5802	20	ISM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-20	11389	-20	198	5prime_fragment	FALSE	canonical	3	27	junction_15	32.0835129085644	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	9665	False	NA	NA	False	NA	NA	NA	26092279	26198305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551
ES.32665.28	chr8	+	4984	23	NIC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.1866676797461	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGATCAGTGTAAAGCCT	9666	False	NA	NA	False	ATTAAA	-15	NA	26092280	26204717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.29	chr8	+	9547	24	NIC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-19	-544	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	32.8076827186655	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCACCTTGTGTTCT	9666	False	NA	NA	False	AATAAA	-17	NA	26092280	26209150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196636_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.3	chr8	+	3899	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	-75	-6	-75	6	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTACAAAATGTGTTT	9610	False	NA	NA	False	AATAAA	-32	NA	26092224	26164938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ES.32665.30	chr8	+	5025	24	NNC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	32.6249814404339	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9668	False	NA	NA	False	ATTAAA	-18	NA	26092282	26204720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181164_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.32	chr8	+	4920	22	NIC	ENSMUSG00000054823.18	novel	5261	23	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	29.8493572289945	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGATCAGTGTAAAGCCTA	9675	False	NA	NA	False	ATTAAA	-16	NA	26092289	26204718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.33	chr8	+	6268	20	ISM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-2	10905	-2	682	5prime_fragment	FALSE	canonical	3	27	junction_15	32.0835129085644	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	9683	False	NA	NA	False	NA	NA	NA	26092297	26198789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551
ES.32665.34	chr8	+	2995	5	NIC	ENSMUSG00000054823.18	novel	3818	8	NA	NA	13	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.448426187029	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAGAACAATCCTTACA	9698	False	NA	NA	False	AATAAA	-14	NA	26092312	26164920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26163349
ES.32665.35	chr8	+	202	1	Intergenic	novelGene_26665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTTACAGGTTTTAGTT	NA	False	NA	NA	False	AATAAA	-3	NA	26102886	26103088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26102900_26103100
ES.32665.36	chr8	+	4789	1	NIC	ENSMUSG00000054823.18	novel	2834	10	NA	NA	-12615	3010	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAAAGGCGTGGGG	NA	False	NA	NA	False	NA	NA	NA	26151836	26156625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26151800_26156600
ES.32665.37	chr8	+	5781	17	NIC	ENSMUSG00000054823.18	novel	10105	24	NA	NA	-8744	0	intron_retention	FALSE	canonical	3	27	junction_9	17.4731937550066	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCAGTGTAAAGCCTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	26155707	26204719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.38	chr8	+	3993	4	ISM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	90019	13396	-1841	589	internal_fragment	FALSE	canonical	3	40	junction_3	0.942809041582063	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTGTGGGGAGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	26182318	26191601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26184873_26188760_26188964_26189938_26190052_26190478
ES.32665.39	chr8	+	1842	1	NIC	ENSMUSG00000054823.18	novel	5261	23	NA	NA	6509	229	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACAGCTTGCACGTGCT	NA	False	NA	NA	False	NA	NA	NA	26196494	26198336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26196500_26198300
ES.32665.4	chr8	+	2527	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	-108	-3	-73	3	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCCTGCTGATTTGT	9612	False	NA	NA	False	ATTAAA	-16	NA	26092226	26153618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
ES.32665.40	chr8	+	5671	4	ISM	ENSMUSG00000054823.18	ENSMUST00000153597.3	1865	10	14678	-4434	8852	-541	3prime_fragment	FALSE	canonical	3	34	junction_1	5.31245915016974	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCTTGTGTTCTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	26198837	26209153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.5	chr8	+	3696	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	-45	1	-45	-1	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCTTTTTTTTCCC	9640	False	NA	14	True	TTTAAA	-19	NA	26092254	26167987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ES.32665.6	chr8	+	4309	20	ISM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	-44	12906	-44	-1319	5prime_fragment	FALSE	canonical	3	27	junction_15	32.0835129085644	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGGTGCTGTTATTAT	9641	False	NA	NA	False	AGTAAA	-16	NA	26092255	26196788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551
ES.32665.7	chr8	+	9994	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-36	-4697	-36	0	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGGGCTGGTTCTTTA	9649	False	NA	19	True	AATAAA	-23	NA	26092263	26209694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32665.8	chr8	+	4343	19	ISM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-35	8019	-35	-1129	5prime_fragment	FALSE	canonical	2	6	junction_14	33.8049963434073	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTCAAAAGTTTTCTC	9650	False	NA	NA	False	ATTAAA	-24	NA	26092264	26196978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551
ES.32665.9	chr8	+	5019	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	-35	277	-35	1	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCAGTGTAAAGCCTAAG	9650	False	NA	NA	False	ATTAAA	-18	NA	26092264	26204720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ES.32666.1	chr8	-	187	1	Intergenic	novelGene_26666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATATGCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	26132280	26132093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26132100_26132300
ES.32667.1	chr8	+	1498	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	-17	2	-17	-2	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210046	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ES.32667.10	chr8	+	1446	6	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	150	2	-25	-2	3prime_fragment	FALSE	canonical	3	39	junction_1	17.1067238242745	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210213	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ES.32667.11	chr8	+	4134	2	ISM	ENSMUSG00000031570.18	ENSMUST00000139120.9	2115	4	-126	10	0	-10	intron_retention	FALSE	canonical	3	60	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTCCTATAACATACT	NA	False	NA	3	True	AATAAA	-15	NA	26210238	26214900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26210673_26211200
ES.32667.2	chr8	+	2138	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	-41	2	-14	-2	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210049	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
ES.32667.3	chr8	+	2253	4	NIC	ENSMUSG00000031570.18	novel	2099	6	NA	NA	-14	-2	intron_retention	FALSE	canonical	0	0	junction_2	29.1318840219212	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210049	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26210179_26210293_26210673_26211688_26212628_26214106
ES.32667.4	chr8	+	2087	6	NIC	ENSMUSG00000031570.18	novel	1483	7	NA	NA	0	1	intron_retention	FALSE	canonical	3	21	junction_2	21.0047613649858	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTGTGTGTGTGAGTG	NA	False	NA	18	True	AATAAA	-30	NA	26210063	26214915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26212628_26214106
ES.32667.5	chr8	+	537	5	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	12	3056	-12	45	5prime_fragment	FALSE	canonical	3	39	junction_2	16.7107749670684	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTCTTTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	26210075	26211858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688
ES.32667.6	chr8	+	1427	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	-10	2	-10	-2	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210077	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ES.32667.7	chr8	+	1555	7	NIC	ENSMUSG00000031570.18	novel	1483	7	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	26.0410999938345	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACATACTGTGTGTGTG	NA	False	NA	12	True	AATAAA	-24	NA	26210094	26214909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26210179_26210293_26210511_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ES.32667.8	chr8	+	2692	4	NIC	ENSMUSG00000031570.18	novel	2099	6	NA	NA	8	-2	intron_retention	FALSE	canonical	3	58	junction_3	2.94392028877595	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210098	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26210179_26210293_26210673_26211200_26212628_26214106
ES.32667.9	chr8	+	2136	6	NNC	ENSMUSG00000031570.18	novel	2099	6	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_2	28.6803068323894	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTGTGTGTGTGTGA	NA	False	NA	15	True	AATAAA	-27	NA	26210114	26214912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26210179_26210293_26210511_26210626_26210673_26211200_26211265_26211688_26212628_26214106
ES.32668.1	chr8	+	2152	1	Antisense	novelGene_ENSMUSG00000061313.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCACCCAGTTTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	26225912	26228064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_26225900_26228100
ES.32668.10	chr8	+	918	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	27	1718	27	133	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGCTTTTCTTCTTCA	8467	False	NA	NA	False	AAGAAA	-42	NA	26275342	26292285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ES.32668.11	chr8	+	1211	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	27	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.902254704477	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAATGGAGTTTCTGGT	8467	False	NA	17	True	AATAAA	-20	NA	26275342	26292558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282164_26282254_26283704_26283821_26291955
ES.32668.12	chr8	+	1074	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	1	398	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	185.053145519515	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTGTCACAAAATGGAG	8712	False	NA	9	True	AATAAA	-12	NA	26275587	26292550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26291819
ES.32668.13	chr8	+	828	3	NIC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	4	407	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	213	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGGAGTTTCTGGTG	8715	False	NA	18	True	AATAAA	-21	NA	26275590	26292559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26275746_26282184_26282254_26291955
ES.32668.14	chr8	+	5762	2	ISM	ENSMUSG00000037296.8	ENSMUST00000210647.2	672	3	4	-3643	4	3643	intron_retention	FALSE	canonical	3	430	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAATAACATAGTCATGT	8715	False	NA	NA	False	NA	NA	NA	26275590	26287791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26275746_26282184
ES.32668.15	chr8	+	1048	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	-4	409	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	192.3856803403	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGTTTCTGGTGGA	8720	False	NA	20	True	AATAAA	-23	NA	26275595	26292561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980_26287088_26291955
ES.32668.16	chr8	+	3886	1	NIC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	13065	413	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTCTGGTGGAGAGT	NA	False	NA	24	True	AATAAA	-27	NA	26288679	26292565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26288700_26292600
ES.32668.2	chr8	+	4965	5	Antisense	novelGene_ENSMUSG00000110127.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGACCCTTTGTTGACCA	NA	False	NA	NA	False	NA	NA	NA	26227356	26294768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_26228339_26229492_26231837_26236844_26236981_26238564_26240030_26294730
ES.32668.3	chr8	+	9033	1	Antisense	novelGene_ENSMUSG00000110127.2_AS_novelGene_ENSMUSG00000061313.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTCAGAATCATTATT	NA	False	NA	NA	False	AAAACA	-11	NA	26227356	26236389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_26227400_26236400
ES.32668.4	chr8	+	177	1	Intergenic	novelGene_26667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAAGTATAT	NA	False	NA	NA	False	NA	NA	NA	26246190	26246367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26246200_26246400
ES.32668.5	chr8	+	1217	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	4	1442	4	409	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGTTTCTGGTGGA	8444	False	NA	20	True	AATAAA	-23	NA	26275319	26292561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ES.32668.6	chr8	+	1363	5	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	7	407	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	204.913853850832	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGGAGTTTCTGGTG	8447	False	NA	18	True	AATAAA	-21	NA	26275322	26292559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26278052_26278204_26282184_26282254_26283704_26283821_26291955
ES.32668.7	chr8	+	1676	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	16	3909	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	180.855375000763	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTACAGTTTAG	8456	False	NA	NA	False	NA	NA	NA	26275331	26288057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282184_26282254_26283704_26283821_26286980
ES.32668.8	chr8	+	4465	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	20	406	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	183.187214498053	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAATGGAGTTTCTGGT	8460	False	NA	17	True	AATAAA	-20	NA	26275335	26292558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282184_26282254_26283704_26287088_26291955
ES.32668.9	chr8	+	1183	4	NNC	ENSMUSG00000037296.8	novel	2663	4	NA	NA	20	400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	199.710345806676	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTCACAAAATGGAGTT	8460	False	NA	11	True	AATAAA	-14	NA	26275335	26292552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26275746_26282184_26282254_26286980_26287088_26291955
ES.32669.1	chr8	+	2909	1	NIC	ENSMUSG00000031574.9	novel	4046	7	NA	NA	1041	1202	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26299542	26302451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26299500_26302500
ES.3267.1	chr10	-	4197	2	Antisense	novelGene_ENSMUSG00000020327.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTGGTTGTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	79594114	79589881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79592223_79592258
ES.32670.1	chr8	-	3426	7	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	18240	-675	-1314	675	3prime_fragment	FALSE	canonical	3	39	junction_5	7.81024967590665	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTATTATTTAA	NA	False	NA	NA	False	AGTAAA	-21	NA	26226068	26214697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033
ES.32670.10	chr8	-	5038	15	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_7	17.4601587294372	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26244414	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.100	chr8	-	2316	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	869.393770905272	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337688	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330118_26337606
ES.32670.101	chr8	-	2228	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1211.29103835199	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337712	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318886_26321300_26321377_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.102	chr8	-	3217	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	3119	junction_11	188.979752721755	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337721	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.103	chr8	-	6504	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	900.762568095296	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337713	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326399_26328288_26329917_26330039_26330104_26337606
ES.32670.104	chr8	-	3102	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	40	-1	intron_retention	FALSE	canonical	3	30	junction_7	922.591096510771	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337682	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.107	chr8	-	2298	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	874.359651402099	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337696	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318876_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.108	chr8	-	2540	6	ISM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	15482	7	-1025	-1	3prime_fragment	FALSE	canonical	3	3304	junction_3	194.836957479837	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26314628	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166
ES.32670.109	chr8	-	3226	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	9	-1	intron_retention	FALSE	canonical	2	38	junction_8	888.817492916451	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337713	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.11	chr8	-	4206	18	Fusion	ENSMUSG00000037316.10_ENSMUSG00000061313.11	novel	4246	18	NA	NA	8244	-1	multi-exon	FALSE	canonical	0	0	junction_17	14.9026831610259	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26259366	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26259309
ES.32670.110	chr8	-	2137	17	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	847.666355354511	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337699	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307073_26307248_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.111	chr8	-	3125	14	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	35	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	920.543889912066	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337687	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329923_26337606
ES.32670.112	chr8	-	4691	14	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	26	-2	intron_retention	FALSE	canonical	1	28	junction_7	930.084128026654	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTACTTGGCTTCACT	NA	False	NA	-14	True	AATAAA	-17	NA	26337696	26306905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317398_26318793_26318888_26321300_26322764_26323778_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.115	chr8	-	6094	14	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-1	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	929.162650330517	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTACTTGGCTTCAC	NA	False	NA	-15	True	AATAAA	-16	NA	26337723	26306906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26325083_26326027_26326399_26328288_26329917_26330039_26330104_26337606
ES.32670.116	chr8	-	4727	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	24	-3	intron_retention	FALSE	canonical	0	0	junction_6	1221.96343552297	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTACTTGGCTTCAC	NA	False	NA	-15	True	AATAAA	-16	NA	26337698	26306906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317199_26317420_26318791_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.117	chr8	-	3338	7	NIC	ENSMUSG00000031575.19	novel	2234	15	NA	NA	1465	4	intron_retention	FALSE	canonical	3	3191	junction_5	106.882593947232	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTATGGTACTTGGCTT	NA	False	NA	-18	True	AATAAA	-13	NA	26322108	26306909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300
ES.32670.118	chr8	-	2322	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	873.333648854905	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTATGGTACTTGGC	NA	False	NA	-20	True	AATAAA	-11	NA	26337721	26306911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322673_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.119	chr8	-	3896	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	875.144290325252	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTATGGTACTTGGC	NA	False	NA	-20	True	AATAAA	-11	NA	26337711	26306911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26315623_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.12	chr8	-	4530	17	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	33	-1	intron_retention	FALSE	canonical	1	18	junction_16	11.8156411167571	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26244408	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.123	chr8	-	2286	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	871.629880676935	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTATGGTACTTGGC	NA	False	NA	-20	True	AATAAA	-11	NA	26337687	26306911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329778_26329917_26330039_26330104_26337606
ES.32670.124	chr8	-	3922	6	ISM	ENSMUSG00000031575.19	ENSMUST00000151856.8	3315	13	10516	13	-893	2	3prime_fragment	FALSE	canonical	3	3191	junction_5	116.616636891998	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTATGGTACTTGGC	NA	False	NA	-20	True	AATAAA	-11	NA	26320281	26306911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793
ES.32670.125	chr8	-	6033	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-1	1	intron_retention	FALSE	canonical	3	3119	junction_10	199.337215400905	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTGTATGGTACTTGG	NA	False	NA	-21	True	AATAAA	-10	NA	26337723	26306912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.126	chr8	-	5932	14	NIC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	230	junction_13	871.366953047856	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTGTATGGTACTTG	NA	False	NA	-22	True	AATAAA	-9	NA	26330804	26306913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26321377_26322667_26322764_26323778_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.127	chr8	-	2231	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	1212.14503956366	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTGTATGGTACTTG	NA	False	NA	-22	True	AATAAA	-9	NA	26337685	26306913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322781_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.128	chr8	-	2277	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	871.112484125902	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGCTTGTATGGTACTT	NA	False	NA	-23	True	AATAAA	-8	NA	26337685	26306914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309735_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.129	chr8	-	2309	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	871.629880676935	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGCTTGTATGGTACT	NA	False	NA	-24	True	AATAAA	-7	NA	26337712	26306915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326107_26329766_26329917_26330039_26330104_26337606
ES.32670.131	chr8	-	5981	14	NIC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	-7	-30	intron_retention	FALSE	canonical	3	230	junction_13	869.212763598399	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCAGTCTTTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	26330805	26307043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.132	chr8	-	2055	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	3	279	3	-169	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTGTGTCTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	26337719	26307182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.133	chr8	-	1939	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	-43	441	-43	-331	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCAGTACACTTTGAT	NA	False	NA	-1	True	TATAAA	-22	NA	26337765	26307344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.134	chr8	-	4168	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	34	-331	intron_retention	FALSE	canonical	3	3119	junction_10	192.917034625045	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCAGTACACTTTGAT	NA	False	NA	-1	True	TATAAA	-22	NA	26337688	26307344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.136	chr8	-	2895	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	37	-332	intron_retention	FALSE	canonical	3	30	junction_8	928.000044633747	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCAGTACACTTTGA	NA	False	NA	-2	True	TATAAA	-21	NA	26337685	26307345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.137	chr8	-	2767	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	10	-332	intron_retention	FALSE	canonical	3	3119	junction_11	188.979752721755	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCAGTACACTTTGA	NA	False	NA	-2	True	TATAAA	-21	NA	26337712	26307345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.138	chr8	-	1897	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	3	-333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	870.562107044766	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCAGTACACTTTG	NA	False	NA	-3	True	TATAAA	-20	NA	26337719	26307346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329923_26330039_26330104_26337606
ES.32670.139	chr8	-	4016	14	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-333	intron_retention	FALSE	canonical	2	38	junction_9	927.345521354544	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCAGTACACTTTG	NA	False	NA	-3	True	TATAAA	-20	NA	26337699	26307346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.14	chr8	-	4443	19	NNC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.4000286368632	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCATGTGGCCTTATCT	NA	False	NA	-6	True	AATAAA	-19	NA	26244414	26215375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225219_26225314_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.141	chr8	-	1994	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	-10	1323	-10	-333	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCAGTACACTTTG	NA	False	NA	-3	True	TATAAA	-20	NA	26330825	26307346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.142	chr8	-	2677	12	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-333	intron_retention	FALSE	non_canonical	0	0	junction_6	983.959189169151	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGCAGTACACTTTG	NA	False	NA	-3	True	TATAAA	-20	NA	26337699	26307346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318889_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.143	chr8	-	3865	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-334	intron_retention	FALSE	canonical	3	3119	junction_10	194.306474202894	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGCTGCAGTACACTTT	NA	False	NA	-4	True	TATAAA	-19	NA	26337699	26307347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.144	chr8	-	3589	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	68	-334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	871.629880676935	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGCTGCAGTACACTTT	NA	False	NA	-4	True	TATAAA	-19	NA	26337654	26307347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326399_26328288_26329917_26330039_26330104_26337606
ES.32670.145	chr8	-	5574	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-334	intron_retention	FALSE	canonical	3	3119	junction_10	199.337215400905	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGCTGCAGTACACTTT	NA	False	NA	-4	True	TATAAA	-19	NA	26337699	26307347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.147	chr8	-	1954	16	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	671	-335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1173.87249733521	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGCTGCAGTACACTT	NA	False	NA	-5	True	TATAAA	-18	NA	26337051	26307348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318889_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26336874
ES.32670.148	chr8	-	7698	12	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	26	-335	intron_retention	FALSE	canonical	3	3119	junction_8	205.389249479258	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGCTGCAGTACACTT	NA	False	NA	-5	True	TATAAA	-18	NA	26337696	26307348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.15	chr8	-	4560	7	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	-7082	-3	intron_retention	FALSE	canonical	3	37	junction_6	7.9320026895272	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCATGTGGCCTTATCT	NA	False	NA	-6	True	AATAAA	-19	NA	26231836	26215375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217765_26222989_26223150_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313
ES.32670.150	chr8	-	1901	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-1	-336	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	849.435378485157	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337723	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307622_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.151	chr8	-	1954	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	9	-336	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	874.224873181317	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337713	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324915_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.152	chr8	-	2981	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-336	intron_retention	FALSE	canonical	3	3119	junction_11	190.515412628426	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337699	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.153	chr8	-	1909	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	23	-336	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	862.759139814429	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337699	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329958_26330039_26330104_26337606
ES.32670.155	chr8	-	1874	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	37	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	874.359651402099	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337685	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318904_26321296_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.156	chr8	-	4259	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	45	-336	intron_retention	FALSE	canonical	3	3119	junction_11	192.113287687558	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337677	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.159	chr8	-	2023	17	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-6	-336	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	1142.02878001169	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337728	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26328856_26328983_26329770_26329917_26330039_26330104_26337606
ES.32670.160	chr8	-	1896	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	9	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	870.562107044766	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337713	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329931_26330039_26330104_26337606
ES.32670.161	chr8	-	2086	14	NNC	ENSMUSG00000031575.19	novel	2234	15	NA	NA	477	-336	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	1228.12981889986	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26329633	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329129
ES.32670.163	chr8	-	2861	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	35	-336	intron_retention	FALSE	canonical	3	3119	junction_11	191.763630391241	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337687	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26330104_26337606
ES.32670.165	chr8	-	1897	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	875.144290325252	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337722	26307349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313341_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.17	chr8	-	4294	18	NNC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	16.4634438286454	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCATGTGGCCTTATC	NA	False	NA	-7	True	AATAAA	-18	NA	26244408	26215376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225172_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.171	chr8	-	1835	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	36	-339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	856.817792117372	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGATGCTGCAGTAC	NA	False	NA	-9	True	TATAAA	-14	NA	26337686	26307352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307520_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.172	chr8	-	1708	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	7	-340	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	929.481773282244	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGAGATGCTGCAGTA	NA	False	NA	-10	True	TATAAA	-13	NA	26337715	26307353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.174	chr8	-	2682	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	10	-341	intron_retention	FALSE	canonical	3	30	junction_7	922.591096510771	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAGAGATGCTGCAGT	NA	False	NA	-11	True	TATAAA	-12	NA	26337712	26307354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.176	chr8	-	5245	5	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	30	474	intron_retention	FALSE	non_canonical	0	0	junction_1	1493.74244767965	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAATTAGTGTT	NA	False	NA	NA	False	TTTAAA	-44	NA	26337692	26312302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26312378_26323951_26325083_26326027_26329917_26330039_26330104_26337606
ES.32670.177	chr8	-	1587	10	ISM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	44	9757	44	368	5prime_fragment	FALSE	canonical	3	3119	junction_6	157.883298047859	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	26337678	26316660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.178	chr8	-	1457	8	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	2	368	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	1186.35058658295	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	26337720	26316660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26317420_26318793_26318888_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.18	chr8	-	4450	20	NNC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.8490172390541	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACATTCATGTGGCCT	NA	False	NA	-11	True	AATAAA	-14	NA	26244311	26215380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26217391_26217656_26217765_26222989_26223150_26223604_26223720_26224742_26224914_26225035_26225139_26225219_26225314_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.19	chr8	-	4362	18	NNC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	14.9026831610259	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACATTCATGTGGCCT	NA	False	NA	-11	True	AATAAA	-14	NA	26244289	26215380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244069
ES.32670.2	chr8	-	4377	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	-131	0	2	0	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244439	26215372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.21	chr8	-	4941	15	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	35	-9	intron_retention	FALSE	canonical	0	0	junction_7	17.7114052957697	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTACATTCATGTGGCC	NA	False	NA	-12	True	AATAAA	-13	NA	26244406	26215381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.22	chr8	-	7219	12	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	35	-10	intron_retention	FALSE	canonical	1	18	junction_11	13.0719559767409	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTACATTCATGTGGC	NA	False	NA	-13	True	AATAAA	-12	NA	26244406	26215382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217765_26222989_26226118_26228238_26228335_26229489_26229613_26231313_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.24	chr8	-	3744	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	20	482	20	-482	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTCTTGAGGTTTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	26244288	26215854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.25	chr8	-	3782	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	23	-493	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTCAATTGCTGTCT	NA	False	NA	NA	False	ATTAAA	-13	NA	26244418	26215865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.26	chr8	-	3027	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	24	583	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCACATTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	26244417	26216619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.27	chr8	-	4480	1	FSM	ENSMUSG00000061313.11	ENSMUST00000209419.3	1836	1	-97	-2547	33	2218	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAATCACAAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	26244408	26239928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26239900_26244400
ES.32670.28	chr8	-	3405	2	NIC	ENSMUSG00000061313.11	novel	2509	13	NA	NA	-6	2197	intron_retention	FALSE	canonical	1	18	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26244447	26239949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26243201_26244293
ES.32670.29	chr8	-	1964	1	Intergenic	novelGene_26668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCACAGGAAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	26250006	26248042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26248000_26250000
ES.32670.3	chr8	-	4332	18	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_17	11.4631952042464	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244475	26215372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.30	chr8	-	6958	6	NNC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	19	2405	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	157.273011034952	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	26275207	26252160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26252733_26252947_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.31	chr8	-	6963	6	NNC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	13	2405	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	157.273011034952	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	26275213	26252160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26252725_26252940_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.32	chr8	-	208	1	Intergenic	novelGene_26669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCATCAGATCTCATTACA	NA	False	NA	NA	False	NA	NA	NA	26252941	26252733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26252700_26252900
ES.32670.33	chr8	-	176	2	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	7392	53260	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26306211	26252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26252884_26306155
ES.32670.34	chr8	-	5118	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	-237	-5	-237	5	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTCTCTAGCACCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	26275552	26254560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.36	chr8	-	4532	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	189.520447445652	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTCTCTAGCA	NA	False	NA	NA	False	AATAAA	-25	NA	26275226	26254565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26258438_26259309_26259565_26267450_26267556_26274926
ES.32670.37	chr8	-	5985	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-237	0	intron_retention	FALSE	canonical	3	378	junction_1	11.1455023315337	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTCTCTAGCA	NA	False	NA	NA	False	AATAAA	-25	NA	26275552	26254565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.4	chr8	-	5131	17	NNC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	37	0	intron_retention	FALSE	canonical	0	0	junction_3	20.7240048011961	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244404	26215372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26217391_26217656_26217765_26222989_26223150_26223604_26223720_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.40	chr8	-	4801	5	NNC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.317222826424	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTTTTCTCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	26275249	26254568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267550_26274926
ES.32670.41	chr8	-	6313	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	13	-3	intron_retention	FALSE	canonical	3	388	junction_2	7.03957069398096	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTGTTTTCTCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	26275213	26254568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26258438_26259309_26261362_26267450_26267556_26274926
ES.32670.42	chr8	-	4189	2	NNC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAACAGCTGTTTTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	26275238	26254571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26258441_26274918
ES.32670.43	chr8	-	4640	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	81	155	-8	-155	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGACTTTTGACTTG	NA	False	NA	NA	False	AATGAA	-34	NA	26275234	26254720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.44	chr8	-	4438	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	89	349	0	-349	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTGGTTTCTGGATTT	NA	False	NA	NA	False	NA	NA	NA	26275226	26254914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.45	chr8	-	3829	5	NNC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-6	-769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.901287297668	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGAAGTAGCAAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	26275232	26255334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26258438_26259309_26259565_26261106_26261167_26267450_26267556_26274926
ES.32670.46	chr8	-	3534	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	67	1275	-22	-1275	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTTTTCGAAGCTGG	NA	False	NA	NA	False	TATAAA	-21	NA	26275248	26255840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.47	chr8	-	2338	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	67	2471	-22	-2471	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACACCATTCTCCAGTC	NA	False	NA	NA	False	TATAAA	-36	NA	26275248	26257036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.48	chr8	-	2198	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	81	2597	-8	2376	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAGAAAAATATTTTT	NA	False	NA	60	True	GATAAA	-20	NA	26275234	26257162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.49	chr8	-	4599	3	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-5	2366	intron_retention	FALSE	canonical	3	388	junction_1	8.5	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTGCTTTCTTAAGAA	NA	False	NA	50	True	GATAAA	-10	NA	26275231	26257172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26261362_26267450_26267556_26274926
ES.32670.50	chr8	-	2985	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	17	2316	intron_retention	FALSE	canonical	3	378	junction_1	11.1455023315337	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGTGGACATTCTTT	NA	False	NA	0	True	NA	NA	NA	26275209	26257222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.52	chr8	-	3672	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	-7	2309	intron_retention	FALSE	canonical	3	388	junction_2	7.03957069398096	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACAGTGTTTGTGGAC	NA	False	NA	-7	True	NA	NA	NA	26275233	26257229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26258438_26259309_26261362_26267450_26267556_26274926
ES.32670.53	chr8	-	2304	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	-187	2759	-187	2214	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGTGTCCTTTCTGTA	NA	False	NA	-102	True	AATATA	-27	NA	26275502	26257324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ES.32670.54	chr8	-	160	1	Intergenic	novelGene_26670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	26260870	26260710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26260700_26260900
ES.32670.55	chr8	-	4944	17	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	37	42678	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1143.49861820806	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTCCTCAATCGACTT	NA	False	NA	NA	False	AAGAAA	-10	NA	26337685	26263345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26263358_26306035_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326399_26328288_26329917_26330039_26330104_26337606
ES.32670.56	chr8	-	2447	2	FSM	ENSMUSG00000037316.10	ENSMUST00000209948.2	2506	2	-314	373	-225	-373	multi-exon	FALSE	canonical	3	405	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAAGAAACTATCAGC	NA	False	NA	NA	False	NA	NA	NA	26275540	26265722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26267556_26274926
ES.32670.57	chr8	-	911	2	FSM	ENSMUSG00000037316.10	ENSMUST00000209948.2	2506	2	-9	1604	-9	-1604	multi-exon	FALSE	canonical	3	405	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26275235	26266953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26267556_26274926
ES.32670.58	chr8	-	2492	15	NNC	ENSMUSG00000031575.19	novel	3315	13	NA	NA	-1	5627	intron_retention	FALSE	canonical	0	0	junction_1	880.203953638019	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTTGCTTCTGTGTGTC	NA	False	NA	NA	False	AATAGA	-18	NA	26337723	26300396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26301244_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.59	chr8	-	6680	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	2	-4345	2	3465	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAATCTCAAATGTGA	NA	False	NA	NA	False	TATAAA	-20	NA	26337720	26302558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.61	chr8	-	5248	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	34	-2945	34	2065	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGACAAGGGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	26337688	26303958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.62	chr8	-	4220	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	35	-1918	35	1038	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAATAAGCTCAGTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	26337687	26304985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.63	chr8	-	3906	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	3	-1572	3	692	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCAGTGACAACTGCT	NA	False	NA	NA	False	ATTAAA	-30	NA	26337719	26305331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.64	chr8	-	3968	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	18	-679	0	679	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAGGTATCAGAATGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	26330797	26305344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.65	chr8	-	3966	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	2	678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1180.97642464003	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATAGGTATCAGAATGC	NA	False	NA	NA	False	ATTAAA	-16	NA	26337720	26305345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318889_26321300_26321377_26322667_26322764_26323778_26323875_26324915_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.66	chr8	-	6603	6	ISM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	13681	-676	1710	676	3prime_fragment	FALSE	canonical	3	3304	junction_3	194.836957479837	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTATAGGTATCAGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	26317134	26305347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166
ES.32670.67	chr8	-	3225	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	-8	-880	-8	0	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337730	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.68	chr8	-	3299	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	8	0	8	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26330807	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.69	chr8	-	3203	16	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	870.533721345704	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337724	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308589_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.7	chr8	-	5039	16	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	13	-1	intron_retention	FALSE	canonical	1	18	junction_15	11.4871909340602	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26244428	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244293
ES.32670.70	chr8	-	5629	15	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	904.625325530872	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337719	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317199_26317420_26318793_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.71	chr8	-	3249	16	NNC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	862.759139814429	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337713	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329958_26330039_26330104_26337606
ES.32670.73	chr8	-	3028	14	NIC	ENSMUSG00000031575.19	novel	3307	16	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	929.481773282244	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337705	26306023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.75	chr8	-	3247	17	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	35	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1343.25225519772	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	26337687	26306039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318889_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26336874_26336955_26337606
ES.32670.76	chr8	-	3214	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	33	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1155.30356568691	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	26337689	26306039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307577_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329923_26330039_26330104_26337606
ES.32670.77	chr8	-	3203	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	15	-16	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_9	864.074646981125	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	26337707	26306039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.78	chr8	-	3124	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	1	-16	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	895.061929222139	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGAAATTTC	NA	False	NA	NA	False	NA	NA	NA	26337721	26306039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.79	chr8	-	2595	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	27	10	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	895.061929222139	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAAGACTTCCCTTTTT	NA	False	NA	NA	False	AATACA	-33	NA	26337695	26306542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.8	chr8	-	4905	13	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	904	-1	intron_retention	FALSE	canonical	3	37	junction_7	7.11170787426543	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26242298	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126
ES.32670.80	chr8	-	2629	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	62	-354	62	3	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGACCTAAAGACTTC	NA	False	NA	NA	False	AATACA	-26	NA	26337660	26306549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.81	chr8	-	2755	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	19	533	1	-4	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCTACACTGACCTAA	NA	False	NA	NA	False	AATACA	-19	NA	26330796	26306556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.82	chr8	-	2395	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	-43	-15	-43	9	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAAGTGAAGTTCCTGT	NA	False	NA	3	True	AATAAA	-34	NA	26337765	26306888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.84	chr8	-	2385	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	862.759139814429	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCACTGGAAGTG	NA	False	NA	-7	True	AATAAA	-24	NA	26337724	26306898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329958_26330039_26330104_26337606
ES.32670.85	chr8	-	2294	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	870.562107044766	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCACTGGAAGTG	NA	False	NA	-7	True	AATAAA	-24	NA	26337668	26306898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329923_26330039_26330104_26337606
ES.32670.86	chr8	-	2432	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	0	875	0	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCACTGGAAGTG	NA	False	NA	-7	True	AATAAA	-24	NA	26330815	26306898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ES.32670.87	chr8	-	2257	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	895.061929222139	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTCACTGGAAGTG	NA	False	NA	-7	True	AATAAA	-24	NA	26337713	26306898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.9	chr8	-	4634	17	NIC	ENSMUSG00000061313.11	novel	4246	18	NA	NA	10	-1	intron_retention	FALSE	canonical	3	20	junction_16	11.4564392373896	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTGGCCTTATCTAT	NA	False	NA	-4	True	AATAAA	-21	NA	26244431	26215373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ES.32670.91	chr8	-	4599	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	48	-1	intron_retention	FALSE	canonical	3	3119	junction_10	192.917034625045	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGCTTCACTGGAAGT	NA	False	NA	-8	True	AATAAA	-23	NA	26337674	26306899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.93	chr8	-	2297	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1182.84098677717	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGGCTTCACTGGAAG	NA	False	NA	-9	True	AATAAA	-22	NA	26337676	26306900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318889_26321296_26321377_26322667_26322758_26323774_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.95	chr8	-	2321	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	-792	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	869.393770905272	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26338514	26306903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26338414
ES.32670.97	chr8	-	4461	14	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	3119	junction_10	190.06451723049	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337719	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32670.98	chr8	-	2311	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	870.533721345704	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTACTTGGCTTCACTG	NA	False	NA	-13	True	AATAAA	-18	NA	26337705	26306904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26307537_26307631_26307692_26308581_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ES.32671.1	chr8	+	218	1	Intergenic	novelGene_26671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTAACATGAT	NA	False	NA	NA	False	NA	NA	NA	26358828	26359046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26358800_26359000
ES.32672.1	chr8	+	4303	5	NNC	ENSMUSG00000031576.17	novel	3536	27	NA	NA	-20026	-14891	intron_retention	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26381681	26396646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26381775_26382016_26382170_26386636_26389854_26389975_26390074_26395904
ES.32673.1	chr8	-	245	1	Intergenic	novelGene_26672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATACTGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	26390931	26390686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26390700_26390900
ES.32674.1	chr8	+	1553	9	NNC	ENSMUSG00000031576.17	novel	3536	27	NA	NA	-2324	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	2.84769643747363	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAAGTTCATTGCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	26399383	26427960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26399465_26400877_26400975_26403611_26403837_26408316_26408504_26409611_26409690_26411447_26411588_26422267_26422463_26424432_26424546_26427523
ES.32674.2	chr8	+	1295	7	NNC	ENSMUSG00000031576.17	novel	1446	8	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.685557397916	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAAGTTCATTGCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	26401673	26427960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26401789_26403611_26403837_26408316_26408504_26409611_26409690_26411447_26411588_26424432_26424546_26427523
ES.32674.3	chr8	+	1339	8	NNC	ENSMUSG00000031576.17	novel	1446	8	NA	NA	-24	-142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.10365156891435	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAATAAAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	26401683	26427819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26401789_26403611_26403837_26408316_26408504_26409611_26409690_26411447_26411588_26422267_26422463_26424432_26424546_26427523
ES.32674.4	chr8	+	177	1	Intergenic	novelGene_26673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	26416134	26416311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26416100_26416300
ES.32674.5	chr8	+	129	1	Intergenic	novelGene_26675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	26423252	26423381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26423300_26423400
ES.32674.6	chr8	+	358	2	NNC	ENSMUSG00000031576.17	novel	3536	27	NA	NA	23025	-116	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGCCAGTTGCTTA	NA	False	NA	NA	False	AATAAA	-15	NA	26424744	26427845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26424781_26427523
ES.32675.1	chr8	-	885	1	Intergenic	novelGene_26674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	26418443	26417558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26417600_26418400
ES.32676.1	chr8	+	157	1	Intergenic	novelGene_26677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	26437597	26437754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26437600_26437800
ES.32677.1	chr8	-	4689	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	-9	-1986	-9	1986	multi-exon	TRUE	canonical	3	85	junction_10	15.0390495171943	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGATTTTTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	26466790	26432494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ES.32677.12	chr8	-	174	1	Intergenic	novelGene_26678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26438603	26438429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26438400_26438600
ES.32677.5	chr8	-	2050	2	Intergenic	novelGene_26676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATGATGTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	26441412	26432500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26433905_26440766
ES.32677.6	chr8	-	2696	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	-3	1	-3	-1	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGTTACAGCTCTGTC	NA	False	NA	NA	False	AATATA	-19	NA	26466784	26434481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ES.32677.7	chr8	-	3623	17	NIC	ENSMUSG00000037260.9	novel	2694	18	NA	NA	16	-1	intron_retention	FALSE	canonical	3	85	junction_9	15.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCGTTACAGCTCTGTC	NA	False	NA	NA	False	AATATA	-19	NA	26466765	26434481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ES.32677.8	chr8	-	2511	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	-5	188	-5	-188	multi-exon	FALSE	canonical	3	85	junction_10	15.0390495171943	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGTTGTCTGATTTTA	NA	False	NA	-24	True	TATAAA	-18	NA	26466786	26434668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ES.32677.9	chr8	-	3415	16	NIC	ENSMUSG00000037260.9	novel	2694	18	NA	NA	-657	-190	intron_retention	FALSE	canonical	3	101	junction_3	13.3726088205207	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCATGTTGTCTGATTT	NA	False	NA	-26	True	TATAAA	-16	NA	26462913	26434670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869
ES.32678.1	chr8	+	161	1	Intergenic	novelGene_26679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	26482554	26482715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26482600_26482700
ES.32679.1	chr8	-	4082	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	38.9711431702997	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATTATTCAGCCTTA	NA	False	NA	NA	False	NA	NA	NA	26484142	26470627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479770_26484114
ES.32679.10	chr8	-	2857	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	12	-841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.6318588371291	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAACAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	26484149	26471472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26483444_26483542_26484114
ES.32679.11	chr8	-	2925	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	25	-841	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	45.3431361950185	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAACAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	26484136	26471472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26484114
ES.32679.12	chr8	-	2777	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	1	-842	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.2593274925162	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAATAAAAAAACAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	26484160	26471473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479670_26479770_26484114
ES.32679.13	chr8	-	3026	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	33	-842	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.6152386818265	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAATAAAAAAACAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	26484128	26471473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26475985_26476561_26477522_26477669_26479677_26479770_26484114
ES.32679.14	chr8	-	3629	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	3728	-844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.4404424085076	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAATAAAAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26480433	26471475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479770_26480010
ES.32679.15	chr8	-	1941	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	-6	1678	-6	-1678	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTGTCACTGAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	26484167	26472309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ES.32679.16	chr8	-	2018	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	19	-1754	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	45.3431361950185	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGTGCCCCTTTCTTG	NA	False	NA	NA	False	AAGAAA	-13	NA	26484142	26472385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26484114
ES.32679.17	chr8	-	4550	7	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	5	-1758	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.0984016202715	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGAAGTGTGCCCCTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	26484156	26472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473492_26473563_26473673_26473934_26476169_26476219_26476561_26477522_26477669_26479193_26479770_26484114
ES.32679.18	chr8	-	1323	4	ISM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	25	4866	25	-4866	5prime_fragment	FALSE	canonical	3	50	junction_3	29.4542960458327	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTAGAATATACTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	26484136	26475497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26476561_26477522_26477669_26479677_26479770_26484114
ES.32679.2	chr8	-	3594	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	19	0	19	0	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATGGAATTATTCAGC	NA	False	NA	NA	False	NA	NA	NA	26484142	26470631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ES.32679.3	chr8	-	3243	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	3718	-767	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.8466989672793	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTCTCATAAGGTGC	NA	False	NA	NA	False	NA	NA	NA	26480443	26471398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26479999
ES.32679.4	chr8	-	3269	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	7	-821	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	38.9711431702997	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484154	26471452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479770_26484114
ES.32679.5	chr8	-	3311	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	3763	-821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.687759489278	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26480398	26471452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26480010
ES.32679.6	chr8	-	4782	4	NIC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	18	-822	intron_retention	FALSE	canonical	3	50	junction_3	32.6190128606002	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGCTGGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	26484143	26471453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26473673_26476273_26476561_26477522_26479770_26484114
ES.32679.7	chr8	-	2794	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	-6	825	-6	-825	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCCCTGTGGTGCTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	26484167	26471456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ES.32679.8	chr8	-	2970	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	10	-841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.4535562418666	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAACAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	26484151	26471472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479402_26479677_26479770_26484114
ES.3268.1	chr10	-	1727	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	-109	21	-109	6	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCTTGGCGTCTTCCTT	NA	False	NA	-1	True	AATACA	-22	NA	79602895	79594369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.11	chr10	-	2435	6	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-10	-8	intron_retention	FALSE	canonical	3	909	junction_3	98.2914034898271	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602754	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.12	chr10	-	1574	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-40	-8	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	357.615915273835	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602826	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.13	chr10	-	3620	5	NIC	ENSMUSG00000035890.10	novel	773	6	NA	NA	-10	-8	intron_retention	FALSE	canonical	3	909	junction_2	55.7331813195694	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602754	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.14	chr10	-	1554	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	341.383559028551	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602744	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598372_79598480_79598540_79602586
ES.3268.15	chr10	-	1562	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	340.953053036631	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602750	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597458_79597914_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.16	chr10	-	1896	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	13	-8	intron_retention	FALSE	canonical	3	909	junction_3	92.4814377403953	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602731	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.17	chr10	-	1554	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	328.57143439441	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602769	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598131_79598315_79598380_79598480_79598540_79602586
ES.3268.18	chr10	-	1562	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-8	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	343.678174314285	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAGCAGAGCCCATG	NA	False	NA	-17	True	AATACA	-6	NA	79602752	79594385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596735_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.2	chr10	-	1915	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	386	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_8	333.929609910532	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602358	79594375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79601855
ES.3268.20	chr10	-	1350	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-6	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	430.664239866744	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGTCTGTGGAGAGT	NA	False	NA	-10	True	AATAAA	-25	NA	79602750	79594590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598131_79598315_79598380_79598480_79598562_79602586
ES.3268.22	chr10	-	1463	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	-71	247	-71	-220	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCATGCATGGTCTGTGG	NA	False	NA	-15	True	AATAAA	-20	NA	79602857	79594595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.23	chr10	-	1612	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-3	-221	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	333.351822403898	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCATGCATGGTCTGTG	NA	False	NA	-16	True	AATAAA	-19	NA	79602778	79594596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79597146_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.24	chr10	-	1322	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-10	-225	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	328.57143439441	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602754	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598131_79598315_79598380_79598480_79598540_79602586
ES.3268.25	chr10	-	5392	8	ISM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	42	252	0	-225	intron_retention	FALSE	canonical	3	909	junction_4	95.3819389911648	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602744	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480
ES.3268.26	chr10	-	1275	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	-225	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	357.615915273835	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602744	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.27	chr10	-	1438	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	3	-225	intron_retention	FALSE	canonical	3	909	junction_5	92.3283846509019	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602772	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.28	chr10	-	1209	9	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	13	-225	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	338.39360864975	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602731	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602709
ES.3268.29	chr10	-	1412	10	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	34	-225	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	415.901994628305	503	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602710	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597044_79597146_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.3	chr10	-	5623	8	ISM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	36	27	-6	0	intron_retention	FALSE	canonical	3	909	junction_4	95.3819389911648	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602750	79594375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480
ES.3268.31	chr10	-	3141	5	NIC	ENSMUSG00000035890.10	novel	1408	8	NA	NA	3114	-225	intron_retention	FALSE	canonical	3	909	junction_3	108.23700845829	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79599630	79594600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79598164_79598315_79598380_79598480
ES.3268.5	chr10	-	1880	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-47	-8	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_3	333.351822403898	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602833	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596624_79596741_79596822_79597146_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.6	chr10	-	5715	2	NIC	ENSMUSG00000035890.10	novel	773	6	NA	NA	2545	-8	intron_retention	FALSE	canonical	3	1012	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79600199	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79598380_79598480
ES.3268.7	chr10	-	1497	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	311.30371022524	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602750	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79595071_79596695_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.8	chr10	-	1638	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	909	junction_5	92.3283846509019	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602755	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.3268.9	chr10	-	1959	7	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	15	-8	intron_retention	FALSE	canonical	3	909	junction_4	89.7552226892675	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAGAGCCCATGGC	NA	False	NA	-15	True	AATACA	-8	NA	79602729	79594383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79595071_79596624_79596741_79596822_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ES.32680.1	chr8	+	2189	2	Antisense	novelGene_ENSMUSG00000015994.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	26489776	26492013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_26491193_26491240
ES.32681.1	chr8	+	2197	3	Intergenic	novelGene_26680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTGTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	26505731	26508068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26506667_26506748_26506898_26506955
ES.32682.1	chr8	+	206	1	Antisense	novelGene_ENSMUSG00000037234.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACAGACTAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	26530007	26530213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_26530000_26530200
ES.32683.1	chr8	+	176	1	Intergenic	novelGene_26681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	26542297	26542473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26542300_26542500
ES.32684.1	chr8	+	291	1	Intergenic	novelGene_26683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	26591693	26591984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26591700_26592000
ES.32684.2	chr8	+	170	1	Intergenic	novelGene_26682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAGCAAGGACA	NA	False	NA	NA	False	NA	NA	NA	26591693	26591863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26591700_26591900
ES.32685.1	chr8	+	200	1	Intergenic	novelGene_26684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTCAGTCAGAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	26603536	26603736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26603500_26603700
ES.32686.1	chr8	+	226	1	Intergenic	novelGene_26685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACAGTCATCAGTGCTA	NA	False	NA	NA	False	NA	NA	NA	26605023	26605249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_26605000_26605200
ES.32687.1	chr8	+	1549	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	-4	2384	-4	162	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGGGAAAGGTCAGAGTC	NA	False	NA	NA	False	AGTAAA	-13	NA	26609391	26631515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.10	chr8	+	3711	7	NIC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.4995291864501	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTTTAATGTGTTAT	NA	False	NA	3	True	AATAAA	-13	NA	26609498	26633895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26630838
ES.32687.12	chr8	+	3366	10	NNC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	30.6247700923595	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTTTAATGTGTTAT	NA	False	NA	3	True	AATAAA	-13	NA	26609508	26633895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838_26632487_26632841_26632956_26633046
ES.32687.13	chr8	+	1430	8	NIC	ENSMUSG00000013878.19	novel	1000	8	NA	NA	15	17	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.4226184016042	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTATCATTCACCCAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	26609518	26631169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609988_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.14	chr8	+	6799	6	NIC	ENSMUSG00000013878.19	novel	1297	7	NA	NA	16	1	intron_retention	FALSE	canonical	2	7	junction_4	24.9270936934092	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATGTGTTATGTTTC	NA	False	NA	8	True	AATAAA	-18	NA	26609519	26633900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26619184_26629007_26629119_26630838
ES.32687.16	chr8	+	1228	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	156	2545	-25	1	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGATACTTTGTTGTT	NA	False	NA	NA	False	AAAAAG	-15	NA	26609551	26631354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.17	chr8	+	3839	9	NNC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	-25	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.4282416784649	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609551	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26624758_26624822_26625656_26625731_26629007_26629119_26630838
ES.32687.19	chr8	+	4049	7	NIC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.3446583263767	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609555	26633899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609988_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26629007_26629119_26630838
ES.32687.2	chr8	+	3853	7	NIC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	31.6999824745833	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609395	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609629_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26629007_26629119_26630838
ES.32687.20	chr8	+	4004	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.4226184016042	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609677	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609988_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.21	chr8	+	3713	9	NNC	ENSMUSG00000013878.19	novel	741	5	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	31.6385840391128	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609677	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26609988_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838_26632106_26632401
ES.32687.22	chr8	+	857	6	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	10	-5218	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	30.8648667581767	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGGGCTTCTTTTG	NA	False	NA	NA	False	TATAAA	-27	NA	26609701	26625777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609988_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656
ES.32687.23	chr8	+	531	1	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	172	-5873	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTGTCTAATATCCTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	26609863	26610394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609900_26610400
ES.32687.24	chr8	+	2215	1	NIC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	11783	-3093	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGATTTGACTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	26625687	26627902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26625700_26627900
ES.32687.3	chr8	+	3784	7	NIC	ENSMUSG00000013878.19	novel	1000	8	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	31.7700068198503	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609397	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609629_26610472_26610592_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.4	chr8	+	1647	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	17	2265	2	281	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGACCTCATTTTCAG	NA	False	NA	NA	False	AAGAAA	-12	NA	26609412	26631634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.5	chr8	+	3911	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	21	-3	1	3	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTATGTTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	26609416	26633902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ES.32687.7	chr8	+	3894	8	NIC	ENSMUSG00000013878.19	novel	3929	8	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	32.9260147752441	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTAATGTGTTATGT	NA	False	NA	5	True	AATAAA	-15	NA	26609428	26633897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26628896_26629008_26630838
ES.32688.1	chr8	-	1887	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	58	-15	58	15	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTGTCAGCAACAAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	26505620	26488734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ES.32688.10	chr8	-	1850	1	NIC	ENSMUSG00000015994.11	novel	1930	9	NA	NA	58	-13184	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	26505620	26503770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26503800_26505600
ES.32688.11	chr8	-	6958	1	ISM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	90843	3	6768	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGAGCTCGTTTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	26518409	26511451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26511500_26518400
ES.32688.12	chr8	-	5432	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	-388	7792	-388	2439	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCCGTCTATACTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	26609640	26519240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.14	chr8	-	9099	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	71	2433	intron_retention	FALSE	canonical	0	0	junction_17	18.3180517634426	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATAGCATCCGTCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	26609181	26519246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26582381_26582537_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.15	chr8	-	4738	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	-29	2100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4716471567189	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGCTTGAAGCTACCCT	NA	False	NA	NA	False	AATAAA	-17	NA	26609281	26519579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.16	chr8	-	3753	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	29	1173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4716471567189	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTCAGAAACCATATT	NA	False	NA	NA	False	TATAAA	-35	NA	26609223	26520506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.18	chr8	-	3439	20	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	74	1031	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	14.8269799750339	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCAGAGGGTTCTTTAG	NA	False	NA	NA	False	AAGAAA	-12	NA	26609178	26520648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.19	chr8	-	3632	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	7	1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4716471567189	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTCAGAGGGTTCTTTA	NA	False	NA	NA	False	AAGAAA	-11	NA	26609245	26520649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.2	chr8	-	1672	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	15	243	15	155	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGTGTTTGATGTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	26505663	26488992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ES.32688.20	chr8	-	6956	16	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	-3206	982	intron_retention	FALSE	canonical	3	42	junction_5	8.04818820190814	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTCTTGTTTCATAC	NA	False	NA	NA	False	NA	NA	NA	26572611	26520697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541
ES.32688.22	chr8	-	2962	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	-4	9878	-4	353	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTCTTATATGAAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	26609256	26521326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.23	chr8	-	6628	21	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	184	230	intron_retention	FALSE	canonical	3	40	junction_18	8.51043477150257	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATACAAAGTGGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	26609068	26521449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.24	chr8	-	2771	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	11	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4716471567189	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTTTTCGATTGTT	NA	False	NA	NA	False	TTTAAA	-27	NA	26609241	26521506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.25	chr8	-	6611	21	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	73	102	intron_retention	FALSE	canonical	3	40	junction_18	8.51043477150257	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTACTGTGTTACCATA	NA	False	NA	NA	False	NA	NA	NA	26609179	26521577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.27	chr8	-	2580	22	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.4716471567189	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTTTCTTTGTATGA	NA	False	NA	NA	False	ATTAAA	-19	NA	26609225	26521681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.28	chr8	-	5274	11	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	138	-3	intron_retention	FALSE	canonical	3	42	junction_5	8.67698104181402	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTTTCTTTGTATG	NA	False	NA	NA	False	ATTAAA	-18	NA	26560128	26521682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101
ES.32688.29	chr8	-	885	8	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	-9398	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.1780056072107	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATACTTTTTCTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	26543996	26521686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538275_26538368_26543971
ES.32688.3	chr8	-	5121	6	NIC	ENSMUSG00000015994.11	novel	1930	9	NA	NA	57	148	intron_retention	FALSE	canonical	3	814	junction_3	111.171938905463	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCCATAGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	26505621	26488999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26503584_26505408
ES.32688.31	chr8	-	178	1	FSM	ENSMUSG00000037234.18	ENSMUST00000211777.2	1954	1	1450	326	1450	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	26528619	26528441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26528400_26528600
ES.32688.32	chr8	-	2282	16	ISM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	5	26374	5	-9706	5prime_fragment	FALSE	canonical	3	40	junction_13	7.13489079570715	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCATCACTAGTGTCC	NA	False	NA	NA	False	TATAAA	-18	NA	26609247	26537822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.33	chr8	-	2153	16	ISM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	20	26488	20	-9820	5prime_fragment	FALSE	canonical	3	40	junction_13	7.13489079570715	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAACTGAAAGTTCACT	NA	False	NA	NA	False	ATTAAA	-10	NA	26609232	26537936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.34	chr8	-	176	1	FSM	ENSMUSG00000109640.2	ENSMUST00000210389.2	3538	1	1705	1657	1705	-1657	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26554375	26554199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26554200_26554400
ES.32688.35	chr8	-	3719	4	NIC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	21	24	intron_retention	FALSE	canonical	3	45	junction_1	7.1336448530109	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAGAATAAAGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	26609231	26577007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_26578221_26583684_26585859_26600763_26600850_26608985
ES.32688.36	chr8	-	1693	5	ISM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	-3	65559	-3	24	5prime_fragment	FALSE	canonical	3	40	junction_2	8.16624148553054	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAGAATAAAGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	26609255	26577007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ES.32688.37	chr8	-	9003	4	NNC	ENSMUSG00000037234.18	novel	12836	22	NA	NA	61	24	intron_retention	TRUE	non_canonical	0	0	junction_1	26.8493740874697	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAGAATAAAGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	26609191	26577007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26583274_26583413_26585859_26600763_26600850_26608985
ES.32688.4	chr8	-	1598	11	Fusion	ENSMUSG00000015994.11_ENSMUSG00000037234.18	novel	1930	9	NA	NA	-4	148	multi-exon	FALSE	canonical	0	0	junction_8	454.319755238532	398	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCCATAGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	26525181	26488999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26518610_26518706_26524958_26525031_26525160
ES.32688.9	chr8	-	2658	7	NNC	ENSMUSG00000015994.11	novel	1930	9	NA	NA	43	-1881	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	363.428886517783	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTGTAAGTGCATTTG	NA	False	NA	NA	False	AATAAA	-23	NA	26505635	26492467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_26493541_26493667_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ES.32689.1	chr8	-	5853	2	Genic_Genomic	ENSMUSG00000110120.2	novel	1465	1	NA	NA	-913	3689	multi-exon	TRUE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTAATTAATATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	26623583	26617516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_26621605_26621818
ES.32689.2	chr8	-	2378	2	Intergenic	novelGene_26686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	26626392	26617540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26619180_26625653
ES.32689.3	chr8	-	3325	2	Genic_Genomic	ENSMUSG00000110120.2	novel	1465	1	NA	NA	-913	1161	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAGTGTAACCTTCCTA	NA	False	NA	NA	False	NA	NA	NA	26623583	26620044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_26621605_26621818
ES.3269.1	chr10	+	1956	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	4	-5	4	5	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGCCTCCTTCCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	79613109	79618469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
ES.3269.2	chr10	+	1557	3	FSM	ENSMUSG00000020325.11	ENSMUST00000168798.2	1549	3	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGACAATAGAAAC	NA	False	NA	NA	False	NA	NA	NA	79616406	79618441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79616560_79616957_79617186_79617265
ES.32690.1	chr8	+	2259	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	37	-1	37	1	multi-exon	FALSE	canonical	3	177	junction_1	13	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCCCTGCTTTTTTC	NA	False	NA	8	True	ATTAAA	-19	NA	26648205	26654180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26648550_26650802_26650999_26652461
ES.32690.2	chr8	+	1123	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	57	1115	-35	261	multi-exon	FALSE	canonical	3	177	junction_1	13	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGGATTGTTTTTCA	NA	False	NA	121	True	AATATA	-20	NA	26648225	26653064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26648550_26650802_26650999_26652461
ES.32690.3	chr8	+	2476	2	ISM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	67	1215	-25	161	intron_retention	FALSE	canonical	3	177	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTAATTTTTTTGTT	NA	False	NA	21	True	AATAAA	-16	NA	26648235	26652964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_26648550_26650802
ES.32690.4	chr8	+	4480	2	NIC	ENSMUSG00000037214.13	novel	2295	3	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	203	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGCCCTGCTTTTT	NA	False	NA	6	True	ATTAAA	-17	NA	26648235	26654178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_26650999_26652461
ES.32690.6	chr8	+	1004	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	72	1219	-20	157	multi-exon	FALSE	canonical	3	177	junction_1	13	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAAAATTGTAATTTTTT	NA	False	NA	17	True	AATAAA	-12	NA	26648240	26652960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_26648550_26650802_26650999_26652461
ES.32690.7	chr8	+	1420	3	NNC	ENSMUSG00000037214.13	novel	880	4	NA	NA	10	169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGTTTGTAATTT	NA	False	NA	29	True	AATAAA	-24	NA	26648830	26652972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_26649544_26650802_26650999_26652461
ES.32691.1	chr8	-	6651	1	FSM	ENSMUSG00000110317.2	ENSMUST00000209414.2	3592	1	-3060	1	-3060	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGTGCCTCATCTCAG	NA	False	NA	NA	False	AATAAA	-27	NA	26648567	26641916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_26641900_26648600
ES.32692.1	chr8	-	144	1	Intergenic	novelGene_26687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGGGGGGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	26676857	26676713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26676700_26676900
ES.32693.1	chr8	-	161	1	Intergenic	novelGene_26688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	26881620	26881459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_26881500_26881600
ES.32694.1	chr8	-	3265	4	Antisense	novelGene_ENSMUSG00000110338.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTATATGTGGCTTTT	6889	False	NA	NA	False	AATACA	-14	NA	27135455	27124456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_27127335_27127893_27128018_27128371_27128546_27135366
ES.32695.1	chr8	+	180	1	Intergenic	novelGene_26689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27141136	27141316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27141100_27141300
ES.32696.1	chr8	+	3422	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	-269	-1	-240	1	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTGTTTCTCTC	NA	False	NA	6	True	AATAAA	-22	NA	27467112	27471490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27467640_27468595
ES.32697.1	chr8	+	3959	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	-12	891	-12	-891	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAGTAGATTGGAGGA	NA	False	NA	35	True	AATAAA	-32	NA	27513814	27529465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.10	chr8	+	3627	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	21	1190	13	-1190	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTACTTCCATTC	NA	False	NA	12	True	TATAAA	-18	NA	27513847	27529166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.11	chr8	+	3695	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	13	-1190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	121.343406175293	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTACTTCCATTC	NA	False	NA	12	True	TATAAA	-18	NA	27513847	27529166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523097_27523413_27523504_27526041_27526122_27526460
ES.32697.12	chr8	+	4185	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	13	-891	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAGTAGATTGGAGGA	NA	False	NA	35	True	AATAAA	-32	NA	27513847	27529465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.13	chr8	+	4688	11	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	13	-1189	intron_retention	FALSE	canonical	3	283	junction_6	25.3818833028599	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTACTTCCATTCC	NA	False	NA	13	True	TATAAA	-19	NA	27513847	27529167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27523504_27526041_27526122_27526460
ES.32697.14	chr8	+	3901	12	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	14	-905	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.1739203427747	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513848	27529451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518964_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.15	chr8	+	3739	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	14	-1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	121.889607386721	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTGTTTGTACTTCC	NA	False	NA	8	True	TATAAA	-14	NA	27513848	27529162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522358_27523028_27523142_27523413_27523504_27526041_27526122_27526460
ES.32697.16	chr8	+	3989	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	14	-895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	121.343406175293	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTACCAGTAGATTGG	NA	False	NA	31	True	AATAAA	-28	NA	27513848	27529461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523097_27523413_27523504_27526041_27526122_27526460
ES.32697.17	chr8	+	8526	10	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	14	-909	intron_retention	FALSE	canonical	3	11	junction_1	101.784085199996	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGATTAAGGTAAAATT	NA	False	NA	17	True	AATAAA	-14	NA	27513848	27529447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27526122_27526460
ES.32697.18	chr8	+	3744	20	Fusion	ENSMUSG00000031485.16_ENSMUSG00000031483.9	novel	4838	12	NA	NA	14	0	multi-exon	FALSE	non_canonical	1	1	junction_12	86.1581037196449	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCGTGTGGGTGTTT	NA	False	NA	25	True	AATAAA	-17	NA	27513848	27546160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460_27526872_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.19	chr8	+	1444	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	33	3361	25	354	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGCTGCCTCCTCGT	NA	False	NA	NA	False	NA	NA	NA	27513859	27526995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.20	chr8	+	2390	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	33	2415	25	1300	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCCACCTCAGTTTTGG	NA	False	NA	NA	False	TATAAA	-18	NA	27513859	27527941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.21	chr8	+	3785	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	26	-1087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	121.343406175293	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAACTGAGAAATGATT	NA	False	NA	NA	False	NA	NA	NA	27513860	27529269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523097_27523413_27523504_27526041_27526122_27526460
ES.32697.22	chr8	+	4377	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	34	427	26	-427	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGGTTTTGGTTTAGT	NA	False	NA	NA	False	TTTAAA	-21	NA	27513860	27529929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.23	chr8	+	3845	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	26	-1072	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	121.159301701887	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTTGTTATAGTAATT	NA	False	NA	NA	False	NA	NA	NA	27513860	27529284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523142_27523413_27523504_27526041_27526122_27526460
ES.32697.24	chr8	+	5436	10	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	28	-909	intron_retention	FALSE	canonical	3	258	junction_7	30.2324329156619	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGATTAAGGTAAAATT	NA	False	NA	17	True	AATAAA	-14	NA	27513862	27529447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27515207_27517196_27517279_27518926_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.25	chr8	+	3128	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	39	1671	-28	-1671	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGCTATTTTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	27513865	27528685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.26	chr8	+	3724	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	39	1075	-28	-1075	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTCTTGTTATAGTA	NA	False	NA	NA	False	NA	NA	NA	27513865	27529281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.27	chr8	+	4402	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-26	-903	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	150.46453531942	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGGTAAAATTTACCAG	NA	False	NA	23	True	AATAAA	-20	NA	27513867	27529453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523142_27523413_27523504_27525905_27526122_27526460
ES.32697.28	chr8	+	3697	13	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-26	-1194	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	118.668627090548	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTGTTTGTACTTCC	NA	False	NA	8	True	TATAAA	-14	NA	27513867	27529162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27513935_27514861_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.3	chr8	+	4840	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	1	-3	1	3	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTCATTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	27513827	27530359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.30	chr8	+	3815	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-22	-900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.9913945250678	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAAAATTTACCAGTAG	NA	False	NA	26	True	AATAAA	-23	NA	27513871	27529456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460_27529222_27529299
ES.32697.31	chr8	+	5035	11	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-19	-905	intron_retention	FALSE	canonical	3	258	junction_8	30.5425932101385	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513874	27529451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.32	chr8	+	4994	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	48	-204	-19	204	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAATTATGTTATTTT	NA	False	NA	NA	False	ACTAAA	-12	NA	27513874	27530560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.35	chr8	+	3829	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	9	-1192	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTTTGTACTTCCAT	NA	False	NA	10	True	TATAAA	-16	NA	27513902	27529164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.36	chr8	+	3624	7	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-10	-921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.1695530447	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTTTTTGAT	NA	False	NA	5	True	AATAAA	-2	NA	27513918	27529435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27523460_27523504_27526041_27526122_27526460
ES.32697.37	chr8	+	4081	22	Fusion	ENSMUSG00000031485.16_ENSMUSG00000031483.9	novel	4838	12	NA	NA	2	-2	multi-exon	FALSE	non_canonical	0	0	junction_11	132.128896731464	554	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTATGCGTGTGGGTGT	NA	False	NA	23	True	AATAAA	-15	NA	27513930	27546158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_27514194_27514861_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523097_27523413_27523504_27526041_27526122_27526460_27526872_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.38	chr8	+	3894	13	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	3	-1192	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	119.401604074466	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTTTGTACTTCCAT	NA	False	NA	10	True	TATAAA	-16	NA	27513931	27529164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27514194_27514861_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.39	chr8	+	2552	12	NIC	ENSMUSG00000031483.9	novel	940	10	NA	NA	28	1300	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCCACCTCAGTTTTGG	NA	False	NA	NA	False	TATAAA	-18	NA	27513956	27527941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.4	chr8	+	3961	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	1	-909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.662352875498	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGATTAAGGTAAAATT	NA	False	NA	17	True	AATAAA	-14	NA	27513827	27529447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513855_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523142_27523413_27523504_27526041_27526122_27526460
ES.32697.40	chr8	+	4083	13	NNC	ENSMUSG00000031483.9	novel	940	10	NA	NA	49	-931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	137.160768402954	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATAAAATGTTTTTGTC	NA	False	NA	-5	True	AATATA	-30	NA	27513977	27529425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523097_27523413_27523504_27526041_27526122_27526460
ES.32697.41	chr8	+	3550	12	NNC	ENSMUSG00000031483.9	novel	752	8	NA	NA	1009	-1192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.487172544787	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGTTTGTACTTCCAT	NA	False	NA	10	True	TATAAA	-16	NA	27514937	27529164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519372_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.42	chr8	+	3708	11	ISM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	1257	1023	1155	-1023	3prime_fragment	FALSE	canonical	3	258	junction_8	30.5425932101385	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGGTTAATAGCTCCA	NA	False	NA	-97	True	CATAAA	-20	NA	27515083	27529333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.43	chr8	+	3420	10	ISM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	3368	1190	-2208	-1190	3prime_fragment	FALSE	canonical	3	258	junction_7	29.9658241549261	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTACTTCCATTC	NA	False	NA	12	True	TATAAA	-18	NA	27517194	27529166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.44	chr8	+	2657	9	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	86	junction_8	57.907253431673	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532496	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.45	chr8	+	4685	4	FSM	ENSMUSG00000031485.16	ENSMUST00000209856.2	3954	4	-39	-692	2	66	multi-exon	FALSE	canonical	3	252	junction_1	9.80929264637477	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCGTAGTCCATTTAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	27532584	27540335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951
ES.32697.46	chr8	+	2035	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	3	1565	3	0	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532585	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ES.32697.48	chr8	+	1883	7	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	95.675522238217	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCTGGTGTGATGAGTG	NA	False	NA	10	True	ATTAAA	-12	NA	27532591	27544592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27542263_27542363_27543313
ES.32697.5	chr8	+	4053	13	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	1	-897	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	121.159301701887	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATTTACCAGTAGATT	NA	False	NA	29	True	AATAAA	-26	NA	27513827	27529459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523028_27523142_27523413_27523504_27526041_27526122_27526460
ES.32697.50	chr8	+	3586	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	20	-3	14	3	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTGTGGGTGTTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	27532602	27546163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ES.32697.51	chr8	+	2672	9	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	2	6	junction_3	94.2058086054146	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532605	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535827_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.52	chr8	+	3378	8	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	3	86	junction_7	61.1088022651869	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532609	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27542363_27543313_27544055_27545085
ES.32697.53	chr8	+	1411	5	FSM	ENSMUSG00000031485.16	ENSMUST00000209525.2	5767	5	22	4334	-13	-8	multi-exon	FALSE	canonical	3	235	junction_4	15.0416089564913	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGACTCCAGAGTGTC	NA	False	NA	NA	False	CATAAA	-10	NA	27532610	27540261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201
ES.32697.54	chr8	+	3959	7	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_4	12.3917535302941	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532611	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27541430_27542263_27542363_27543313
ES.32697.55	chr8	+	7961	5	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-5	1	intron_retention	FALSE	canonical	3	252	junction_1	8.97217922246318	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGATGAGTGAATT	NA	False	NA	14	True	ATTAAA	-16	NA	27532618	27544596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27542363_27543313
ES.32697.56	chr8	+	1954	7	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	94.8637912424382	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532630	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ES.32697.57	chr8	+	2822	7	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	235	junction_4	12.4465524008324	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGTGTGATGAGTGA	NA	False	NA	11	True	ATTAAA	-13	NA	27532630	27544593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27542363_27543313
ES.32697.58	chr8	+	5424	7	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	5	-1	intron_retention	FALSE	non_canonical	3	86	junction_6	65.0676997868801	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532630	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27541430_27542263_27544055_27545085
ES.32697.59	chr8	+	4305	7	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	8	-1	intron_retention	FALSE	non_canonical	3	86	junction_6	65.1511064116847	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532633	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27544055_27545085
ES.32697.6	chr8	+	4991	11	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	-1	-900	intron_retention	FALSE	canonical	3	283	junction_6	25.3818833028599	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAAAATTTACCAGTAG	NA	False	NA	26	True	AATAAA	-23	NA	27513833	27529456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27523504_27526041_27526122_27526460
ES.32697.60	chr8	+	4771	6	NIC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_4	13.4551105532433	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532633	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27542363_27543313
ES.32697.61	chr8	+	1838	7	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.512188777732	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532633	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535431_27535462_27535951_27536028_27539201_27539337_27542263_27542363_27543313
ES.32697.62	chr8	+	2732	1	FSM	ENSMUSG00000031485.16	ENSMUST00000211281.2	1862	1	-219	-651	8	225	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTGGGAGAGTAGTG	NA	False	NA	NA	False	NA	NA	NA	27532633	27535365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27532600_27535400
ES.32697.63	chr8	+	5296	7	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	86	junction_6	64.7544507264859	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532641	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27542363_27543313_27544055_27545085
ES.32697.64	chr8	+	6212	6	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	9	0	intron_retention	FALSE	non_canonical	3	86	junction_5	69.5143150725086	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCGTGTGGGTGTTT	NA	False	NA	25	True	AATAAA	-17	NA	27532677	27546160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27544055_27545085
ES.32697.65	chr8	+	2926	8	NNC	ENSMUSG00000031485.16	novel	3603	8	NA	NA	-15	-1	intron_retention	FALSE	non_canonical	3	86	junction_7	60.9723925482773	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	False	NA	24	True	AATAAA	-16	NA	27532717	27546159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27532742_27535055_27535164_27535425_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.66	chr8	+	2599	9	NNC	ENSMUSG00000031485.16	novel	382	4	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.5530942021021	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGTGTGGGTGTTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	27532831	27546163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27533015_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313_27544055_27545085
ES.32697.67	chr8	+	2873	7	NNC	ENSMUSG00000031485.16	novel	382	4	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_1	97.1437937629917	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCTGGTGTGATGAGT	NA	False	NA	9	True	ATTAAA	-11	NA	27532850	27544591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27533015_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27542363_27543313
ES.32697.68	chr8	+	2040	8	NNC	ENSMUSG00000031485.16	novel	382	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.3361139653189	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532853	27544595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27533015_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ES.32697.69	chr8	+	2855	2	NNC	ENSMUSG00000031485.16	novel	2143	8	NA	NA	224	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCTGGTGTGATGAGTG	NA	False	NA	10	True	ATTAAA	-12	NA	27541025	27544592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27542363_27543074
ES.32697.7	chr8	+	2745	11	ISM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	17	2415	9	1300	intron_retention	FALSE	canonical	3	258	junction_9	30.637232250972	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCCACCTCAGTTTTGG	NA	False	NA	NA	False	TATAAA	-18	NA	27513843	27527941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041
ES.32697.8	chr8	+	3936	12	NNC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	12	-905	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.5009411056567	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513846	27529451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521931_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ES.32697.9	chr8	+	2499	18	Fusion	ENSMUSG00000031485.16_ENSMUSG00000031483.9	novel	4838	12	NA	NA	12	562	multi-exon	FALSE	canonical	1	1	junction_12	78.6202822999723	545	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGAGCTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	27513846	27542931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460_27526872_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263
ES.32698.1	chr8	+	2055	8	ISM	ENSMUSG00000031486.16	ENSMUST00000178514.8	5129	16	-106	10439	-106	-8627	5prime_fragment	FALSE	canonical	3	17	junction_4	4.03049599419025	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAATAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	27575504	27603024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370
ES.32698.2	chr8	+	5841	19	FSM	ENSMUSG00000031486.16	ENSMUST00000033876.14	5760	19	-70	-11	-55	11	multi-exon	FALSE	canonical	1	1	junction_15	8.55699843532896	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTCCTTTTGTTAAT	NA	False	NA	NA	False	ATTAAA	-37	NA	27575555	27613475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370_27602536_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343_27607544_27608751_27608880_27609161_27609286_27609733_27609880_27610474_27610565_27610793
ES.32698.3	chr8	+	5748	20	NNC	ENSMUSG00000031486.16	novel	5760	19	NA	NA	-39	-2	intron_retention	TRUE	non_canonical	0	0	junction_19	8.64248348425516	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTCGCCCACCCATG	NA	False	NA	NA	False	ATTAAA	-23	NA	27575571	27613461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370_27602536_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343_27607544_27608751_27608880_27609161_27609286_27609733_27609880_27610474_27610565_27610793_27613253_27613315
ES.32698.4	chr8	+	3128	14	ISM	ENSMUSG00000031486.16	ENSMUST00000033876.14	5760	19	-47	5441	-32	-3628	5prime_fragment	FALSE	canonical	1	2	junction_10	9.1282771532739	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGTGGTTTCTGATTT	NA	False	NA	NA	False	NA	NA	NA	27575578	27608023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370_27602536_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343
ES.32698.5	chr8	+	2757	14	ISM	ENSMUSG00000031486.16	ENSMUST00000033876.14	5760	19	-26	5791	-11	-3978	5prime_fragment	FALSE	canonical	1	2	junction_10	9.1282771532739	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGCTCTGCTGATG	NA	False	NA	NA	False	AATAAA	-12	NA	27575599	27607673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370_27602536_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343
ES.32698.6	chr8	+	5513	18	NIC	ENSMUSG00000031486.16	novel	5760	19	NA	NA	78	-3	intron_retention	FALSE	canonical	0	0	junction_7	8.77910384719657	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGTCGCCCACCCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	27575703	27613460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343_27607544_27608751_27608880_27609161_27609286_27609733_27609880_27610474_27610565_27610793
ES.32699.1	chr8	-	4152	1	Antisense	novelGene_ENSMUSG00000031486.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACCAATCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	27612047	27607895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_27607900_27612000
ES.327.1	chr1	+	5271	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	-1022	3548	-1022	10	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATTTTGTGATTCTTGG	267	False	NA	47	True	ATTAAA	-34	NA	38036068	38091112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.14	chr1	+	4127	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-25	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	144.972508964243	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTACAGATTTTGTGA	1383	False	NA	40	True	ATTAAA	-27	NA	38037184	38091105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075094_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.15	chr1	+	4011	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	189.211576796852	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAACCAAGCTTCTACA	1385	False	NA	30	True	ATTAAA	-17	NA	38037186	38091095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071461_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088385_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.16	chr1	+	3907	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.484105708625	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAAGCTTCTACAGAT	1385	False	NA	33	True	ATTAAA	-20	NA	38037186	38091098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037244_38056956_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.17	chr1	+	4379	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-20	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.947241678276	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGGTTCTGCTAGGCCT	1388	False	NA	8	True	AATAAA	-18	NA	38037189	38091348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088104_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.18	chr1	+	5007	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-20	-4	intron_retention	FALSE	canonical	3	450	junction_8	76.7100503075172	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAAGCTTCTACAGAT	1388	False	NA	33	True	ATTAAA	-20	NA	38037189	38091098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.19	chr1	+	5038	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	100	2659	-19	899	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACTGACAAATTTGGCA	1389	False	NA	NA	False	AGTAAA	-25	NA	38037190	38092001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.2	chr1	+	1407	5	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	-111	30209	8	-23628	5prime_fragment	FALSE	canonical	3	579	junction_4	48.9948976935354	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTATACTGGTAGTG	1297	False	NA	NA	False	NA	NA	NA	38037098	38060893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674
ES.327.20	chr1	+	5120	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-18	900	intron_retention	FALSE	canonical	3	450	junction_9	74.4475104901555	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGACAAATTTGGCAC	1390	False	NA	NA	False	AGTAAA	-26	NA	38037191	38092002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.21	chr1	+	5473	23	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-17	1615	intron_retention	FALSE	canonical	1	1	junction_21	148.707517025316	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCAATTTTTCCAAGTC	1391	False	NA	34	True	AATAAA	-26	NA	38037192	38092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088282_38090203_38090366_38090686
ES.327.22	chr1	+	3970	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	2	12	junction_20	145.107483673937	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCTTCTACAGATTT	1391	False	NA	35	True	ATTAAA	-22	NA	38037192	38091100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38089267_38089407_38090203_38090366_38090686
ES.327.23	chr1	+	1364	6	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	-12	29801	-12	-23220	5prime_fragment	FALSE	canonical	3	510	junction_5	62.9558575511445	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACGGTTAAAAAAAGAAGG	1396	False	NA	NA	False	NA	NA	NA	38037197	38061301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244
ES.327.25	chr1	+	3943	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	113	3741	-6	-183	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGGTTTGACAGTGGT	1402	False	NA	NA	False	TATAAA	-28	NA	38037203	38090919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.27	chr1	+	4138	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	186.284697862828	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAAGCTTCTACAGAT	1403	False	NA	33	True	ATTAAA	-20	NA	38037204	38091098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075076_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090370_38090670
ES.327.28	chr1	+	4118	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	188.073830171726	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAGATTTTGTGATT	1403	False	NA	42	True	ATTAAA	-29	NA	38037204	38091107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071448_38072148_38072239_38073109_38073185_38075076_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.3	chr1	+	4455	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	40	3302	40	256	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGCCTCCATTCTAGC	1329	False	NA	18	True	AATAAA	-28	NA	38037130	38091358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.30	chr1	+	3800	21	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	153.70031717599	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGATTCTTGGGACTTT	1403	False	NA	53	True	ATTAAA	-40	NA	38037204	38091118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061315_38075069_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.31	chr1	+	2879	19	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	165.131223539506	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1403	False	NA	41	True	ATTAAA	-28	NA	38037204	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.32	chr1	+	4363	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	147.451879305674	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGGTTCTGCTAGGCCT	1403	False	NA	8	True	AATAAA	-18	NA	38037204	38091348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089275_38089407_38090203_38090366_38090686
ES.327.33	chr1	+	5708	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	1610	intron_retention	FALSE	canonical	0	0	junction_18	148.436183483367	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGATCCAATTTTTCC	1403	False	NA	29	True	AATAAA	-21	NA	38037204	38092712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087900_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.34	chr1	+	3848	23	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	148.707517025316	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCTACAGATTTTGTG	1403	False	NA	39	True	ATTAAA	-26	NA	38037204	38091104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088282_38090203_38090366_38090686
ES.327.36	chr1	+	5274	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	114	2409	-5	1149	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGACTCCACCGACTGCT	1403	False	NA	NA	False	AATAAA	-19	NA	38037204	38092251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.37	chr1	+	4127	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	148.689727825027	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1403	False	NA	41	True	ATTAAA	-28	NA	38037204	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072237_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.39	chr1	+	3292	23	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	151.145003170701	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCTACAGATTTTGTG	1404	False	NA	39	True	ATTAAA	-26	NA	38037205	38091104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058000_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.4	chr1	+	5797	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	59	1941	59	1617	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATTTTTCCAAGTCTT	1348	False	NA	36	True	AATAAA	-28	NA	38037149	38092719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.40	chr1	+	3828	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-1	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.484105708625	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGCAACTTACACTGGT	1407	False	NA	NA	False	TATAAA	-17	NA	38037208	38090908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037386_38056965_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.42	chr1	+	3389	21	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	119	6253	0	523	5prime_fragment	FALSE	canonical	3	450	junction_9	74.349495627072	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAGAATTTAAGTAAGT	1408	False	NA	NA	False	AATACA	-24	NA	38037209	38088407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256
ES.327.43	chr1	+	4565	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	119	3113	0	445	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTCAGAGTGTTCA	1408	False	NA	NA	False	AAGAAA	-16	NA	38037209	38091547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.44	chr1	+	4120	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	145.991920433146	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1408	False	NA	41	True	ATTAAA	-28	NA	38037209	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088179_38088264_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.46	chr1	+	3978	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	151.75894326037	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAAGCTTCTACAGATT	1415	False	NA	34	True	ATTAAA	-21	NA	38037216	38091099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.48	chr1	+	4901	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	11	-5	intron_retention	FALSE	canonical	3	450	junction_9	76.8405561821371	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACCAAGCTTCTACAGA	1419	False	NA	32	True	ATTAAA	-19	NA	38037220	38091097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38090366_38090686
ES.327.49	chr1	+	4095	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	149.103660925288	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1420	False	NA	41	True	ATTAAA	-28	NA	38037221	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076722_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.50	chr1	+	4086	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.089967890264	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	1420	False	NA	37	True	ATTAAA	-24	NA	38037221	38091102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057967_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.52	chr1	+	4099	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	145.695697585399	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1427	False	NA	41	True	ATTAAA	-28	NA	38037228	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073179_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.53	chr1	+	6498	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	22	1603	intron_retention	FALSE	canonical	3	450	junction_9	76.8405561821371	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTATAACCAGATCCAA	1430	False	NA	22	True	AATAAA	-14	NA	38037231	38092705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38090366_38090686
ES.327.54	chr1	+	3837	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	30	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.484105708625	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACACTGGTTTGACAGTG	1438	False	NA	NA	False	TATAAA	-26	NA	38037239	38090917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037402_38056950_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.56	chr1	+	1649	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTCAGAGCCATTATTC	5134	False	NA	NA	False	NA	NA	NA	38054387	38056036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38054400_38056000
ES.327.58	chr1	+	428	2	ISM	ENSMUSG00000026083.13	ENSMUST00000192548.6	5788	22	20995	30411	20995	-23830	internal_fragment	FALSE	canonical	3	579	junction_1	0	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGATAAGAA	8951	False	NA	-29	True	AATGAA	-7	NA	38058204	38060691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38058616_38060674
ES.327.61	chr1	+	4426	19	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	24152	1959	-19629	1599	3prime_fragment	FALSE	canonical	3	450	junction_4	79.0006250951984	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATTTTATAACCAGAT	NA	False	NA	18	True	AATAAA	-10	NA	38061242	38092701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.62	chr1	+	4292	18	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	34266	1941	-9515	1617	3prime_fragment	FALSE	canonical	3	450	junction_3	81.2877753548793	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATTTTTCCAAGTCTT	NA	False	NA	36	True	AATAAA	-28	NA	38071356	38092719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.63	chr1	+	2575	17	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	35056	3560	-8725	-2	3prime_fragment	FALSE	canonical	3	450	junction_2	76.9064976123604	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCTTCTACAGATTT	NA	False	NA	35	True	ATTAAA	-22	NA	38072146	38091100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.65	chr1	+	1327	8	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	1136	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	250.378570511593	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCTTCTACAGATTT	NA	False	NA	35	True	ATTAAA	-22	NA	38084850	38091100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38084891_38085692_38085825_38087807_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.66	chr1	+	3574	4	NIC	ENSMUSG00000026083.13	novel	5788	22	NA	NA	2552	-3	intron_retention	FALSE	canonical	3	705	junction_2	15.9373774505092	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCAAGCTTCTACAGATT	NA	False	NA	34	True	ATTAAA	-21	NA	38086266	38091099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38088006_38088097_38088422_38089267_38090366_38090686
ES.327.67	chr1	+	1387	3	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	51513	3552	4889	6	3prime_fragment	FALSE	canonical	3	704	junction_1	11	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACAGATTTTGTGATTC	NA	False	NA	43	True	ATTAAA	-30	NA	38088603	38091108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_38089407_38090203_38090366_38090686
ES.327.8	chr1	+	4155	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-34	4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	142.449221543456	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1374	False	NA	41	True	ATTAAA	-28	NA	38037175	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075076_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ES.327.9	chr1	+	4019	23	NIC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	-34	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	148.887673284924	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACAGATTTTGTGAT	1374	False	NA	41	True	ATTAAA	-28	NA	38037175	38091106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38090203_38090366_38090686
ES.3270.1	chr10	+	4147	8	NNC	ENSMUSG00000035863.15	novel	2519	8	NA	NA	-14	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.9036264181287	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTTGCTGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	79629391	79656758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79643717_79645455_79648176_79648199_79651018_79651076_79654874
ES.3270.10	chr10	+	2574	8	NNC	ENSMUSG00000035863.15	novel	2519	8	NA	NA	22	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	91.4243302587736	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629427	79656721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79651000_79651076_79651588_79651679_79654874
ES.3270.12	chr10	+	2780	7	FSM	ENSMUSG00000035863.15	ENSMUST00000218631.2	2725	7	-64	9	31	-9	multi-exon	FALSE	canonical	3	162	junction_6	11.7862914721581	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	79629436	79653223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018
ES.3270.13	chr10	+	2605	9	NNC	ENSMUSG00000035863.15	novel	2651	9	NA	NA	-36	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.3521775711583	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629464	79656721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79646261_79646416_79648176_79648199_79651018_79651076_79654874
ES.3270.14	chr10	+	6231	1	NIC	ENSMUSG00000035863.15	novel	2651	9	NA	NA	-5	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79650490	79656721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79650500_79656700
ES.3270.2	chr10	+	2551	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	-13	-19	-13	19	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629392	79656749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
ES.3270.3	chr10	+	2547	7	NNC	ENSMUSG00000035863.15	novel	2519	8	NA	NA	-13	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.1517913679946	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629392	79656749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79651000_79651076_79654874
ES.3270.4	chr10	+	2188	1	NIC	ENSMUSG00000035863.15	novel	2651	9	NA	NA	0	-11912	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79629405	79631593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79629400_79631600
ES.3270.5	chr10	+	6324	7	FSM	ENSMUSG00000035863.15	ENSMUST00000218631.2	2725	7	-82	-3517	13	19	multi-exon	FALSE	canonical	3	162	junction_6	11.7862914721581	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	False	NA	NA	False	NA	NA	NA	79629418	79656749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018
ES.3270.7	chr10	+	1505	6	ISM	ENSMUSG00000035863.15	ENSMUST00000218631.2	2725	7	-76	4116	19	2202	5prime_fragment	FALSE	canonical	3	169	junction_4	9.19565114605812	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGGAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	79629424	79649116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176
ES.3270.8	chr10	+	4405	8	NIC	ENSMUSG00000035863.15	novel	2519	8	NA	NA	20	-9	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	62.893171492684	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629425	79656721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79646261_79648199_79651018_79651076_79654874
ES.3270.9	chr10	+	2620	9	FSM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	22	9	22	-9	multi-exon	FALSE	canonical	1	2	junction_7	77.7495980697007	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79629427	79656721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
ES.32700.1	chr8	-	1908	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	8	-17	8	17	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTTCTTTGGCA	NA	False	NA	-9	True	TATAAA	-13	NA	27618700	27613374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ES.32700.10	chr8	-	2193	1	NIC	ENSMUSG00000031487.6	novel	1899	4	NA	NA	8	-386	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTTGCCTTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	27618700	27616507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27616500_27618700
ES.32700.2	chr8	-	2052	5	NNC	ENSMUSG00000031487.6	novel	1899	4	NA	NA	3	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.267564232408	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATGTGTTTTCTTTG	NA	False	NA	-12	True	TATAAA	-10	NA	27618657	27613377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27614649_27615477_27615668_27615847_27616170_27617487_27617548_27618448
ES.32700.3	chr8	-	1817	4	FSM	ENSMUSG00000031487.6	ENSMUST00000210230.2	620	4	-59	-1138	8	2	multi-exon	FALSE	canonical	2	6	junction_3	38.1255236758206	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAGCTTTTAAAAT	NA	False	NA	-24	True	ATTAAA	-37	NA	27618700	27613389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618524
ES.32700.4	chr8	-	1439	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	-2	462	-2	379	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGGCTTTTCTTTT	NA	False	NA	NA	False	AAGAAA	-1	NA	27618710	27613853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ES.32700.5	chr8	-	1772	4	NIC	ENSMUSG00000031487.6	novel	1899	4	NA	NA	3	373	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	42.9055810925442	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618679	27613859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27614649_27615477_27616170_27617487_27617548_27618448
ES.32700.6	chr8	-	2284	3	ISM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	48	468	0	373	intron_retention	FALSE	canonical	3	75	junction_1	10	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618660	27613859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_27614649_27615847_27616170_27617487
ES.32700.7	chr8	-	2570	3	NIC	ENSMUSG00000031487.6	novel	1899	4	NA	NA	3	373	intron_retention	FALSE	canonical	3	93	junction_2	1	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618648	27613859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27616170_27617487_27617548_27618448
ES.32700.8	chr8	-	1307	4	FSM	ENSMUSG00000031487.6	ENSMUST00000210230.2	620	4	-19	-668	0	373	multi-exon	FALSE	canonical	2	6	junction_3	38.1255236758206	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618660	27613859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618524
ES.32700.9	chr8	-	1579	4	FSM	ENSMUSG00000031487.6	ENSMUST00000211151.2	790	4	-10	-779	-1	372	multi-exon	FALSE	canonical	2	3	junction_3	39.5080863734108	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAATGACTCTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	27618661	27613860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618252
ES.32701.1	chr8	+	1044	3	Antisense	novelGene_ENSMUSG00000031488.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGACTGAGGGTGTCAC	NA	False	NA	NA	False	NA	NA	NA	27643142	27646463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_27643188_27644173_27644964_27646254
ES.32702.1	chr8	-	6393	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	3	-3179	-2	-6	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAGGTTTGTGTCTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27664671	27628806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.10	chr8	-	5958	7	FSM	ENSMUSG00000031488.15	ENSMUST00000209377.2	3769	7	1	-2190	1	1120	multi-exon	FALSE	canonical	0	0	junction_1	35.5293306063221	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTCTGAAAATGTACAT	NA	False	NA	62	True	TATAAA	-16	NA	27664673	27630865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27639063_27639123_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.11	chr8	-	5586	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	-10	2389	-10	796	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCTGCTCAGCGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	27664684	27631189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.12	chr8	-	4009	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	-792	0	792	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACACCTCTGCTCAGCGA	NA	False	NA	NA	False	AATAAA	-16	NA	27664674	27631193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.13	chr8	-	4475	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	5	3485	0	-300	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTGCCCTTCATGTG	NA	False	NA	NA	False	NA	NA	NA	27664669	27632285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.14	chr8	-	2916	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	301	0	-301	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACCTCTGCCCTTCATGT	NA	False	NA	NA	False	NA	NA	NA	27664674	27632286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.15	chr8	-	2628	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	7	582	2	488	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTTTGAATATGCCTT	NA	False	NA	NA	False	CATAAA	-19	NA	27664667	27632567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.16	chr8	-	3741	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	1	4223	1	32	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTTGACTACATTG	NA	False	NA	29	True	NA	NA	NA	27664673	27633023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.17	chr8	-	2150	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	1067	0	3	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCAGCGTTTTGTTTT	NA	False	NA	0	True	NA	NA	NA	27664674	27633052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.18	chr8	-	160	1	Intergenic	novelGene_26690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	27635870	27635710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27635700_27635900
ES.32702.19	chr8	-	5015	1	NIC	ENSMUSG00000031488.15	novel	7965	6	NA	NA	2784	-3650	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-29	NA	27641720	27636705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27636700_27641700
ES.32702.2	chr8	-	7938	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	19	8	0	-8	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCAAGGTTTGTGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	27664655	27628808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.20	chr8	-	194	1	Intergenic	novelGene_26691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	27637070	27636876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27636900_27637100
ES.32702.21	chr8	-	3613	4	ISM	ENSMUSG00000031488.15	ENSMUST00000209377.2	3769	7	7	8183	2	1643	5prime_fragment	FALSE	canonical	3	14	junction_1	32.0312347560939	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTATTAATAGTATTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	27664667	27641238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.22	chr8	-	183	1	Intergenic	novelGene_26692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCGCATTTGTGTAAGA	NA	False	NA	NA	False	NA	NA	NA	27647010	27646827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27646800_27647000
ES.32702.23	chr8	-	915	2	FSM	ENSMUSG00000031488.15	ENSMUST00000211646.2	2321	2	-2	1408	-2	-1408	multi-exon	FALSE	canonical	1	1	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTTTGGGCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	27664671	27656630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27657111_27664236
ES.32702.24	chr8	-	3690	1	FSM	ENSMUSG00000109719.2	ENSMUST00000210111.2	2173	1	-3614	2097	-3614	-2097	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGAGTACTTGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	27664654	27660964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27661000_27664700
ES.32702.3	chr8	-	6041	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	1	-2825	1	-360	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGTGAACCCATGCCA	NA	False	NA	NA	False	NA	NA	NA	27664673	27629160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.4	chr8	-	5954	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	-56	-2681	-56	-504	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGTCTAGAGTTCAATT	NA	False	NA	NA	False	NA	NA	NA	27664730	27629304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.5	chr8	-	7437	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	0	528	0	-528	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGAGCTGACTGCT	NA	False	NA	NA	False	NA	NA	NA	27664674	27629328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.6	chr8	-	5492	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	7	-2282	2	-903	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATCCTCCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	27664667	27629703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.7	chr8	-	4404	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	-29	-1158	-29	1158	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGGTTTTGGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	27664703	27630827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32702.8	chr8	-	5923	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	-10	2052	-10	1133	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATGTATATTTCTGTT	NA	False	NA	75	True	TATAAA	-29	NA	27664684	27630852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ES.32702.9	chr8	-	4388	6	NIC	ENSMUSG00000031488.15	novel	3769	7	NA	NA	6	1123	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.0242028187311	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGAAAATGTACATGTA	NA	False	NA	65	True	TATAAA	-19	NA	27664663	27630862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27633423_27639063_27639123_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ES.32703.1	chr8	+	4175	1	Antisense	novelGene_ENSMUSG00000039720.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGGGTGAGAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	27687994	27692169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_27688000_27692200
ES.32704.1	chr8	+	2811	1	Intergenic	novelGene_26693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-45	NA	27693072	27695883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27693100_27695900
ES.32704.2	chr8	+	175	1	Intergenic	novelGene_26694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGGAGTGGGCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	27693500	27693675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27693500_27693700
ES.32705.1	chr8	+	204	1	Intergenic	novelGene_26696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTATTCTGTAGTGAT	NA	False	NA	NA	False	NA	NA	NA	27699535	27699739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27699500_27699700
ES.32706.1	chr8	+	188	1	Intergenic	novelGene_26697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAATGACATTC	NA	False	NA	NA	False	NA	NA	NA	27702438	27702626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27702400_27702600
ES.32707.1	chr8	-	2041	10	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	40.7458245986288	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTATGTTCTCCTTTTC	NA	False	NA	-4	True	AATAAA	-20	NA	27713874	27687483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687710_27687955_27688099_27688420_27689011_27689294_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.10	chr8	-	1418	10	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.1194150078278	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713831	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687746_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.12	chr8	-	2402	8	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	36	junction_7	28.8097205817759	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713853	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.13	chr8	-	2638	7	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	8	-1	intron_retention	FALSE	canonical	3	68	junction_3	19.5078331845327	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713848	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27688099_27688420_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.14	chr8	-	2593	8	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	78	junction_7	15.556349186104	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713856	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.15	chr8	-	1493	11	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.877012138694	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713821	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27692563_27692680_27713715
ES.32707.16	chr8	-	1324	9	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	38.0813274453504	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713860	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27713715
ES.32707.17	chr8	-	2516	9	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	43	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	49.1704624241017	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713813	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687748_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27692399_27692492_27692563_27692680_27713715
ES.32707.18	chr8	-	3250	5	NIC	ENSMUSG00000039720.8	novel	872	6	NA	NA	2	-2	intron_retention	FALSE	canonical	3	78	junction_4	15.8981130955846	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGCTATGTTCTCC	NA	False	NA	-9	True	AATAAA	-15	NA	27713854	27687488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27689631_27689865_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.19	chr8	-	2888	7	NNC	ENSMUSG00000039720.8	novel	872	6	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	37	junction_3	30.8202675019035	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGCTATGTTCTCC	NA	False	NA	-9	True	AATAAA	-15	NA	27713874	27687488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.2	chr8	-	1524	8	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-18	3	intron_retention	FALSE	canonical	0	0	junction_2	44.8375753499819	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTATGTTCTCCTTTTC	NA	False	NA	-4	True	AATAAA	-20	NA	27713874	27687483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27688099_27688420_27688587_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.20	chr8	-	2826	7	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	1	-2	intron_retention	FALSE	canonical	3	78	junction_6	16.6574974777793	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGCTATGTTCTCC	NA	False	NA	-9	True	AATAAA	-15	NA	27713855	27687488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.21	chr8	-	2091	9	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	3	1	intron_retention	FALSE	canonical	3	5	junction_5	42.1507710487009	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCATTGCTATGTTCT	NA	False	NA	-11	True	AATAAA	-13	NA	27713853	27687490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689953_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.22	chr8	-	1529	10	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.9825517096256	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCATTGCTATGTTC	NA	False	NA	-12	True	AATAAA	-12	NA	27713821	27687491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687746_27687955_27688099_27688420_27688519_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.23	chr8	-	1365	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	28.2016547977833	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCATTGCTATGTTC	NA	False	NA	-12	True	AATAAA	-12	NA	27713813	27687491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.24	chr8	-	351	1	Intergenic	novelGene_26695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTTGTGTGTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	27698377	27698026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27698000_27698400
ES.32707.3	chr8	-	2124	9	NNC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-5	3	intron_retention	FALSE	canonical	3	36	junction_8	34.679785178112	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTATGTTCTCCTTTTC	NA	False	NA	-4	True	AATAAA	-20	NA	27713861	27687483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689971_27690260_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.4	chr8	-	2608	7	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	35	2	intron_retention	FALSE	canonical	3	36	junction_6	30.7376894960496	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTATGTTCTCCTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	27713821	27687484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.5	chr8	-	2202	8	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	26	junction_4	32.6271453278539	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713860	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.6	chr8	-	2312	7	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	1	-1	intron_retention	FALSE	canonical	2	2	junction_6	42.6161810688017	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713855	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27713715
ES.32707.7	chr8	-	1638	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_6	20.0831604418561	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713894	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32707.8	chr8	-	2973	6	NIC	ENSMUSG00000039720.8	novel	872	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	36	junction_5	33.0551055058065	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713856	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27689446_27689537_27689631_27689865_27690373_27690749_27690932_27692399_27692492_27713715
ES.32707.9	chr8	-	2319	9	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	68	junction_5	19.8899314981224	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGCTATGTTCTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	27713867	27687487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27687710_27687955_27688099_27688420_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692680_27713715
ES.32708.1	chr8	+	5221	1	Genic_Genomic	ENSMUSG00000109674.2	novel	NA	NA	NA	NA	-1475	-7321	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATGTGTGTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	27717238	27722459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_27717200_27722500
ES.32708.2	chr8	+	2906	1	Genic_Genomic	ENSMUSG00000109674.2	novel	NA	NA	NA	NA	-1471	-9632	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGCCTCTGAAGTT	NA	False	NA	NA	False	CATAAA	-15	NA	27717242	27720148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_27717200_27720100
ES.32708.3	chr8	+	3141	1	Genic_Genomic	ENSMUSG00000109674.2	novel	NA	NA	NA	NA	-366	-8292	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAAGTGACTTCCATC	NA	False	NA	NA	False	AATATA	-13	NA	27718347	27721488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_27718300_27721500
ES.32709.10	chr8	-	2878	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	41.735356713463	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740901	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
ES.32709.12	chr8	-	2893	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-252	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	43.9335862410525	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTCCCCTGCTCGCCT	NA	False	NA	-13	True	AATAAA	-14	NA	27740896	27715804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719334_27739175_27739238_27740517
ES.32709.14	chr8	-	2522	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9454	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	48.5045100995773	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27730306	27715805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719313_27730214
ES.32709.15	chr8	-	1166	3	NIC	ENSMUSG00000031489.16	novel	1864	3	NA	NA	935	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	26.5	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27717587	27715805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27716498_27716753_27716925_27717284
ES.32709.17	chr8	-	3621	6	NIC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-253	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.0395381859095	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27740897	27715805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27720062_27739175_27739238_27740517
ES.32709.18	chr8	-	3283	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-9466	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.0732870307258	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTCCCCTGCTCGCC	NA	False	NA	-14	True	AATAAA	-13	NA	27730318	27715805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27720062_27730214
ES.32709.19	chr8	-	6374	1	Genic_Genomic	ENSMUSG00000031489.16	novel	NA	NA	NA	NA	-226	-15233	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	27740870	27734496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_27734500_27740900
ES.32709.2	chr8	-	4254	4	NIC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-269	13	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	42.4813684650891	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCCTTTTCTCTGGGTTTG	NA	False	NA	1	True	AATAAA	-28	NA	27721121	27715790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136
ES.32709.20	chr8	-	5121	2	ISM	ENSMUSG00000031489.16	ENSMUST00000211346.2	669	4	-255	16012	-255	-15235	5prime_fragment	FALSE	canonical	3	31	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	27740899	27734498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_27739238_27740517
ES.32709.21	chr8	-	1465	3	NNC	ENSMUSG00000031489.16	novel	669	4	NA	NA	-255	-15236	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	27740899	27734499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27735521_27739175_27739238_27740517
ES.32709.22	chr8	-	1398	2	NNC	ENSMUSG00000031489.16	novel	669	4	NA	NA	-250	-15236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	27740894	27734499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27735521_27740517
ES.32709.3	chr8	-	3098	7	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-224	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.018514709691	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCCCTGCTCGCCTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	27740868	27715801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27719334_27719890_27720121_27739175_27739238_27740517
ES.32709.5	chr8	-	2789	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-266	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	43.5384887197523	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740910	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719302_27739175_27739238_27740517
ES.32709.6	chr8	-	2051	3	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	60.5	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27718602	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716469_27716753_27716822_27717284
ES.32709.7	chr8	-	3431	5	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.0732870307258	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740898	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27720058_27740644
ES.32709.8	chr8	-	1518	3	ISM	ENSMUSG00000031489.16	ENSMUST00000081438.10	2795	4	1635	0	541	0	3prime_fragment	FALSE	canonical	1	3	junction_1	62.5	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27717981	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_27716557_27716753_27716822_27717284
ES.32709.9	chr8	-	3662	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	44.5896849058165	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740877	27715803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27720121_27739175_27739238_27740517
ES.3271.1	chr10	-	174	1	Intergenic	novelGene_2551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	79648970	79648796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79648800_79649000
ES.32710.1	chr8	+	1253	6	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	-9270	127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6005.50101157264	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATTTATTTTATGTA	NA	False	NA	2	True	NA	NA	NA	27741086	27765653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27741267_27741416_27741474_27741585_27741797_27743223_27743303_27763350_27763531_27765107
ES.32710.10	chr8	+	579	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	28	1390	28	-214	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTGTGCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	27750384	27765312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27750579_27763350_27763531_27765107
ES.32710.11	chr8	+	1977	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	30	-10	30	10	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCAGTGGTCCATGTGTG	NA	False	NA	25	True	NA	NA	NA	27750386	27766712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27750579_27763350_27763531_27765107
ES.32710.12	chr8	+	793	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	32	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7188.5	1844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCGCCCACAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	27750388	27765540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27750579_27763350_27763521_27765107
ES.32710.14	chr8	+	898	4	NIC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	53	14	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	7076.25326159418	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCGCCCACAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	27750409	27765540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27750579_27757001_27757118_27763350_27763531_27765107
ES.32710.15	chr8	+	7323	3	NIC	ENSMUSG00000031490.7	novel	798	5	NA	NA	53	16	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	7505.5	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCGCCCACAGCTGGGC	NA	False	NA	16	True	AATAAA	-16	NA	27750409	27765542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_27757118_27763350_27763531_27765107
ES.32710.16	chr8	+	780	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	61	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7508	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCCGCCCACAGCTGGG	NA	False	NA	15	True	AATAAA	-15	NA	27750417	27765541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27750584_27763350_27763531_27765107
ES.32710.2	chr8	+	864	4	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	-9251	25	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7075.78228105479	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGGGCCCTGTCTGA	NA	False	NA	25	True	AATAAA	-25	NA	27741105	27765551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27741267_27743223_27743303_27763350_27763531_27765107
ES.32710.3	chr8	+	1249	5	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	-9220	42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6500.96412080547	1873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTTTTCCACTCGAA	NA	False	NA	42	True	AATAAA	-42	NA	27741136	27765568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27741267_27743223_27743303_27747082_27747482_27763350_27763531_27765107
ES.32710.4	chr8	+	161	1	Intergenic	novelGene_26699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	27745360	27745521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27745400_27745500
ES.32710.5	chr8	+	223	1	Intergenic	novelGene_26700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAGAATACAGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	27746763	27746986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27746800_27747000
ES.32710.6	chr8	+	983	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	-3	1017	-3	159	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATCTGTCTGCCTGTCT	NA	False	NA	34	True	AAAAAG	-27	NA	27750353	27765685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27750579_27763350_27763531_27765107
ES.32710.8	chr8	+	877	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	2	1118	2	58	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAATGACGACATGATTAC	NA	False	NA	58	True	NA	NA	NA	27750358	27765584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_27750579_27763350_27763531_27765107
ES.32710.9	chr8	+	939	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	21	146	at_least_one_novel_splicesite	FALSE	canonical	3	634	junction_1	7191	1844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAGTAATCTATCTATC	NA	False	NA	21	True	AAAAAG	-14	NA	27750377	27765672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_27750579_27763357_27763531_27765107
ES.32711.1	chr8	-	1668	1	Intergenic	novelGene_26698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGATATTCTCAATAG	NA	False	NA	NA	False	NA	NA	NA	27745184	27743516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27743500_27745200
ES.32712.1	chr8	-	175	1	Intergenic	novelGene_26701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	27759883	27759708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27759700_27759900
ES.32713.1	chr8	-	176	1	Antisense	novelGene_ENSMUSG00000031490.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGAGGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	27766350	27766174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_27766200_27766400
ES.32714.1	chr8	+	177	1	Intergenic	novelGene_26704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	27820224	27820401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_27820200_27820400
ES.32715.1	chr8	-	177	2	Intergenic	novelGene_26702	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGAGGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	27821695	27805740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27805748_27821525
ES.32715.2	chr8	-	178	2	Intergenic	novelGene_26703	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGCGAGCAGAGGTCCTG	NA	False	NA	NA	False	NA	NA	NA	27821697	27805741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27805764_27821541
ES.32715.3	chr8	-	179	1	Intergenic	novelGene_26705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	27821697	27821518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_27821500_27821700
ES.32716.1	chr8	-	214	1	Intergenic	novelGene_26706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGTAACAACAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	28367719	28367505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_28367500_28367700
ES.32717.1	chr8	+	175	1	Intergenic	novelGene_26707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTATAATCCTT	NA	False	NA	NA	False	NA	NA	NA	28427058	28427233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_28427100_28427200
ES.32718.1	chr8	-	3153	5	ISM	ENSMUSG00000063626.7	ENSMUST00000211448.2	3087	15	524833	-2031	524833	2018	3prime_fragment	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCCTGGCATCTGTGT	NA	False	NA	NA	False	TATAAA	-16	NA	29184622	29140421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_29143001_29156793_29156973_29165302_29165468_29173130_29173281_29184542
ES.32719.1	chr8	+	126	1	Intergenic	novelGene_26708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTCTCAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	29466553	29466679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_29466600_29466700
ES.3272.1	chr10	+	2472	5	FSM	ENSMUSG00000035852.12	ENSMUST00000046833.5	2414	5	-58	0	11	0	multi-exon	FALSE	canonical	1	2	junction_1	3.57071421427143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658402	79666286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79658521_79661529_79663269_79663711_79663846_79665226_79665266_79665844
ES.3272.2	chr10	+	2477	5	FSM	ENSMUSG00000035852.12	ENSMUST00000219305.2	2569	5	55	37	-14	0	multi-exon	FALSE	canonical	2	3	junction_1	3.26917420765551	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658446	79666286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79658570_79661529_79663269_79663711_79663846_79665226_79665266_79665844
ES.3272.3	chr10	+	2841	1	NIC	ENSMUSG00000035852.12	novel	2569	5	NA	NA	17	-618	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAAAAAAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	79658478	79661319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79658500_79661300
ES.3272.4	chr10	+	2289	4	NIC	ENSMUSG00000035852.12	novel	2414	5	NA	NA	44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.82842712474619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658505	79666286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79658575_79661529_79663269_79665226_79665266_79665844
ES.32720.1	chr8	-	94	2	Intergenic	novelGene_26709	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	29776313	29758908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_29758947_29776257
ES.32720.2	chr8	-	524	1	FSM	ENSMUSG00000110331.2	ENSMUST00000209275.2	551	1	234	-207	234	207	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCTGTAAAAAAAAAAAAA	NA	False	NA	-21	True	ATTAAA	-17	NA	29776775	29776251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_29776300_29776800
ES.32721.1	chr8	-	3737	1	Intergenic	novelGene_26710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGACAATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	31421854	31418117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_31418100_31421900
ES.32722.1	chr8	+	157	1	Intergenic	novelGene_26711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	31570664	31570821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_31570700_31570800
ES.32723.1	chr8	+	174	1	Intergenic	novelGene_26712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAAGGAGTGAGCGGG	NA	False	NA	NA	False	NA	NA	NA	31589243	31589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_31589200_31589400
ES.32724.1	chr8	+	1818	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	-58	-34	-48	34	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGGCTTGTGGTTGT	NA	False	NA	11	True	ATTAAA	-25	NA	31601799	31619695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
ES.32724.2	chr8	+	2102	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	-20	-356	-10	356	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGAATTCTACCTGGT	NA	False	NA	NA	False	NA	NA	NA	31601837	31620017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
ES.32725.1	chr8	-	177	1	Intergenic	novelGene_26713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31607035	31606858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_31606900_31607000
ES.32726.1	chr8	-	106	1	FSM	ENSMUSG00000088252.3	ENSMUST00000157627.3	104	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAGGAGGATCCTCCAC	NA	False	NA	-10	True	NA	NA	NA	31639995	31639889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31639900_31640000
ES.32727.1	chr8	+	3691	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	-31	-8	-6	8	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACTCTGAATTTCTA	NA	False	NA	NA	False	AATAAA	-27	NA	31640336	31653375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.10	chr8	+	5755	7	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	5	-675	intron_retention	FALSE	non_canonical	0	0	junction_4	74.6272217238604	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTCAGCTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	31640348	31652692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31644335_31645541_31645730_31645805_31647651_31648080_31648784_31649909_31650078_31651818
ES.32727.11	chr8	+	4268	7	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	5	-970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.5373344041798	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTTATCTCTTCTA	NA	False	NA	1	True	ATTAAA	-12	NA	31640348	31650112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641398_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647651_31648080_31648784_31649909
ES.32727.12	chr8	+	5470	5	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	5	-968	intron_retention	TRUE	non_canonical	0	0	junction_4	80.6485430742552	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640348	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641398_31643536_31643724_31644241_31644335_31645541_31647665_31648096
ES.32727.14	chr8	+	5912	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	-5	1	intron_retention	FALSE	non_canonical	0	0	junction_5	70.3814678761971	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGCAACAGCACTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	31640349	31653368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647651_31648080_31648784_31649909_31650078_31651818
ES.32727.15	chr8	+	2990	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	-15	677	-2	-677	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGACTCAGCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	31640352	31652690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.16	chr8	+	4469	6	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	1	-968	intron_retention	FALSE	non_canonical	0	0	junction_4	65.9290527764505	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640355	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31647651_31648080_31648784_31649909
ES.32727.17	chr8	+	2139	7	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	2	-970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.5251152879235	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTTATCTCTTCTA	NA	False	NA	1	True	ATTAAA	-12	NA	31640356	31650112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648774_31649909
ES.32727.18	chr8	+	3879	9	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_1	74.9412269715408	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGCAACAGCACTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	31640356	31653368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31642415_31642631_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.19	chr8	+	2290	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	2	-968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.4059964325869	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640356	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31642615_31642755_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ES.32727.2	chr8	+	2178	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	-6	961	-6	-961	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTCTATTTGTCCAC	NA	False	NA	10	True	ATTAAA	-21	NA	31640336	31650121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ES.32727.20	chr8	+	2969	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	3	-676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	69.2994095448533	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGACTCAGCTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	31640357	31652691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645822_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.21	chr8	+	5539	7	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	3	-965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.6697463149579	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640357	31650117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31642391_31643724_31644241_31644335_31645541_31645730_31645805_31647647_31648076_31648784_31649909
ES.32727.22	chr8	+	2116	7	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	6	-968	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_4	58.0909248984345	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640360	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645836_31645950_31648620_31648784_31649909
ES.32727.23	chr8	+	2337	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	-6	1321	-6	964	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGAGACTTTTTATT	NA	False	NA	NA	False	AAGAAA	-12	NA	31640361	31652046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.24	chr8	+	4354	7	NNC	ENSMUSG00000031577.11	novel	3652	8	NA	NA	0	-965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.5182097245426	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640367	31650117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645836_31647656_31648084_31648784_31649909
ES.32727.25	chr8	+	5820	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	4	-676	intron_retention	FALSE	non_canonical	0	0	junction_1	82.0121942152507	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGACTCAGCTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	31640371	31652691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641398_31642415_31642635_31643536_31644335_31645541_31645730_31645805_31647651_31648080_31648784_31649909_31650078_31651818
ES.32727.26	chr8	+	4619	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	4	-965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	80.4984471899924	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640371	31650117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31642391_31642631_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647647_31648076_31648784_31649909
ES.32727.27	chr8	+	3621	6	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	4	-2850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.0142840949574	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTCCTTACCTCTGAT	NA	False	NA	NA	False	TTTAAA	-28	NA	31640371	31648232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647651_31648080
ES.32727.28	chr8	+	1735	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	160	5035	135	-5035	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAATCCGTTTCACTCT	NA	False	NA	10	True	GATAAA	-22	NA	31640502	31646047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
ES.32727.29	chr8	+	4973	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	242	-678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	70.3814678761971	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGAGACTCAGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	31640609	31652689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647647_31648076_31648784_31649909_31650078_31651818
ES.32727.3	chr8	+	4192	7	NIC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	0	-2	intron_retention	FALSE	canonical	2	10	junction_6	56.6852910570478	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCAGCAACAGCACTC	NA	False	NA	NA	False	AATAAA	-17	NA	31640343	31653365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_31641528_31643536_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.30	chr8	+	4892	7	NIC	ENSMUSG00000031577.11	novel	3652	8	NA	NA	769	0	intron_retention	FALSE	canonical	2	10	junction_6	56.9346604060791	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGCAACAGCACTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	31641136	31653367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ES.32727.31	chr8	+	3662	4	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	3320	-970	intron_retention	FALSE	non_canonical	0	0	junction_2	83.4745470188368	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTTATCTCTTCTA	NA	False	NA	1	True	ATTAAA	-12	NA	31643687	31650112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31644335_31645541_31647651_31648080_31648784_31649909
ES.32727.32	chr8	+	3422	3	ISM	ENSMUSG00000031577.11	ENSMUST00000098842.3	5039	8	8096	2	8072	-2	3prime_fragment	FALSE	canonical	2	10	junction_2	82	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAACAGCTTATTACCTC	NA	False	NA	NA	False	AATAAA	-15	NA	31648439	31654728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_31648784_31649909_31650078_31651818
ES.32727.4	chr8	+	2020	5	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	5	4905	4	-4905	5prime_fragment	FALSE	canonical	3	141	junction_1	15.352117117844	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGGGTGGGCATTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	31640347	31646177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805
ES.32727.5	chr8	+	4404	7	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	4	-965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	60.5825882576834	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCTTCTATTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	31640347	31650117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31647651_31648080_31648784_31649909
ES.32727.6	chr8	+	2399	8	NNC	ENSMUSG00000031577.11	novel	5039	8	NA	NA	4	-968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.1893135754724	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640347	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641528_31642391_31642631_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ES.32727.8	chr8	+	3370	5	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	4	-968	intron_retention	FALSE	canonical	0	0	junction_1	76.5685966960346	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640347	31650114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31642755_31643536_31643724_31645541_31645950_31648620_31648784_31649909
ES.32727.9	chr8	+	4344	6	NNC	ENSMUSG00000031577.11	novel	3133	7	NA	NA	5	-970	intron_retention	FALSE	non_canonical	0	0	junction_4	80.6632506163742	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTTTTATCTCTTCTA	NA	False	NA	1	True	ATTAAA	-12	NA	31640348	31650112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31641398_31643536_31643724_31644241_31644335_31645541_31647651_31648080_31648784_31649909
ES.32728.1	chr8	+	99	1	Intergenic	novelGene_26714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATACAA	NA	False	NA	NA	False	NA	NA	NA	31657752	31657851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_31657800_31657900
ES.32729.1	chr8	-	1988	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	66	-152	4	152	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTAATCTCAGCGGGAG	NA	False	NA	NA	False	NA	NA	NA	31658726	31649338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.11	chr8	-	1848	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	252.915054299577	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAACTATGGTCTTGAGA	NA	False	NA	-8	True	TATAAA	-14	NA	31658751	31649496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656654_31656737_31656788_31658692
ES.32729.12	chr8	-	2049	9	NIC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	26	-7	combination_of_known_junctions	FALSE	canonical	3	742	junction_1	40.2794923006733	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACTATGGTCTTGAG	NA	False	NA	-9	True	TATAAA	-13	NA	31658765	31649497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.13	chr8	-	1814	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	-26	114	-26	-114	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGGGTATGGATTTCT	NA	False	NA	0	True	AATAAA	-35	NA	31658818	31649604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.14	chr8	-	1493	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	5	404	4	-404	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGCATTGATTTCTGT	NA	False	NA	NA	False	NA	NA	NA	31658787	31649894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.15	chr8	-	1281	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	4	617	3	-617	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATATTTTAATACAAAAAT	NA	False	NA	NA	False	GATAAA	-13	NA	31658788	31650107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.16	chr8	-	1106	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	2	-736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	255.122241336759	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAATGGCACTGGCTG	NA	False	NA	NA	False	NA	NA	NA	31658720	31650226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_31650618_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.17	chr8	-	1061	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	22	819	21	-819	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTTGAGTTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	31658770	31650309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.18	chr8	-	3388	1	Genic_Genomic	ENSMUSG00000031578.6	novel	NA	NA	NA	NA	-44	634	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	31658836	31655448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_31655400_31658800
ES.32729.19	chr8	-	1396	2	FSM	ENSMUSG00000031578.6	ENSMUST00000209991.2	757	2	40	-679	-21	632	multi-exon	FALSE	canonical	3	845	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	31658751	31655450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31656788_31658692
ES.32729.2	chr8	-	2020	9	NIC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	4	46	intron_retention	FALSE	canonical	3	742	junction_2	39.496835316263	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACTAGTTAAGTATATG	NA	False	NA	44	True	TATAAA	-16	NA	31658787	31649444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656788_31658692
ES.32729.20	chr8	-	1423	5	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	-7431	481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	357.782755313892	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTAACAGGGAG	NA	False	NA	NA	False	ATTAAA	-6	NA	31666223	31655601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31665665
ES.32729.3	chr8	-	2268	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	252.106679359706	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGAGAATTCTGT	NA	False	NA	-1	True	TATAAA	-21	NA	31658729	31649489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658264
ES.32729.4	chr8	-	1920	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	-20	2	-20	-2	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGGTCTTGAGAATTC	NA	False	NA	-4	True	TATAAA	-18	NA	31658812	31649492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.32729.5	chr8	-	2118	8	NIC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	24	-3	intron_retention	FALSE	canonical	3	742	junction_2	39.9101030633925	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	-5	True	TATAAA	-17	NA	31658767	31649493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656661_31656737_31656788_31658692
ES.32729.6	chr8	-	1971	9	NIC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	11	-3	intron_retention	FALSE	canonical	3	742	junction_2	37.3779263068459	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	-5	True	TATAAA	-17	NA	31658780	31649493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656661_31656737_31656788_31658692
ES.32729.7	chr8	-	2216	7	NIC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	742	junction_2	39.7970546090481	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	-5	True	TATAAA	-17	NA	31658788	31649493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656788_31658692
ES.32729.9	chr8	-	1820	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	244.810634804904	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGGTCTTGAGAATT	NA	False	NA	-5	True	TATAAA	-17	NA	31658780	31649493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656156_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ES.3273.1	chr10	-	183	1	Intergenic	novelGene_2552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGTGACTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	79673786	79673603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79673600_79673800
ES.32730.1	chr8	+	2980	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	-18	0	-17	0	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTCGCAGACTCTC	NA	False	NA	6	True	AATAAA	-16	NA	31677341	31727822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
ES.32730.10	chr8	+	4103	3	NNC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	83	-37868	intron_retention	TRUE	canonical	0	0	junction_2	2	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGATTTGTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	31677457	31688189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31678435_31684981_31686655_31686736
ES.32730.11	chr8	+	3028	3	ISM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	13572	-6	-366	6	3prime_fragment	FALSE	canonical	3	13	junction_1	8	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTTTGGAGGAAGGA	NA	False	NA	16	True	AATAAA	-29	NA	31690930	31751517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_31691533_31725622_31726459_31749927
ES.32730.2	chr8	+	2074	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	-9	897	-8	868	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGGCTTGGAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	31677350	31726925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
ES.32730.3	chr8	+	2039	3	NIC	ENSMUSG00000046152.17	novel	2327	4	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAATGTATTCTTTGGA	NA	False	NA	9	True	AATAAA	-22	NA	31677370	31751510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_31677491_31684981_31685318_31749927
ES.32730.4	chr8	+	3168	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	15	0	-1	0	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTATTCTTTGGAG	NA	False	NA	10	True	AATAAA	-23	NA	31677373	31751511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
ES.32730.5	chr8	+	8725	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	30	-5793	15	5793	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGGGTTGATCAATG	NA	False	NA	NA	False	NA	NA	NA	31677389	31733615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
ES.32730.6	chr8	+	3111	5	NNC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.8374582404827	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCACTGTCGCAGACTC	NA	False	NA	4	True	AATAAA	-14	NA	31677402	31727820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_31677491_31678240_31678435_31684981_31685318_31691237_31691533_31725622
ES.32730.7	chr8	+	3021	5	ISM	ENSMUSG00000046152.17	ENSMUST00000161502.2	3527	6	28	23947	28	-3	5prime_fragment	FALSE	canonical	2	4	junction_2	15.833114033569	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCACTGTCGCAGACT	NA	False	NA	3	True	AATAAA	-13	NA	31677402	31727819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31725622
ES.32730.8	chr8	+	3594	7	NIC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	29	-4	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	15.195028426722	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATGCTCAGTGCTTT	NA	False	NA	NA	False	CATAAA	-7	NA	31677403	31751762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31715829_31715930_31725622_31726459_31749927
ES.32730.9	chr8	+	3450	6	NIC	ENSMUSG00000046152.17	novel	3527	6	NA	NA	75	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	16.1195533436879	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCAGTGCTTTCATGTGT	NA	False	NA	NA	False	CATAAA	-14	NA	31677449	31751769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_31677491_31684981_31685318_31691237_31691533_31715829_31715930_31725622_31726459_31749927
ES.32731.1	chr8	-	161	1	Intergenic	novelGene_26715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31794426	31794265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_31794300_31794400
ES.32732.1	chr8	-	177	1	Intergenic	novelGene_26716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	32169951	32169774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_32169800_32170000
ES.32733.1	chr8	-	2582	2	Genic_Genomic	ENSMUSG00000093862.3	novel	2553	1	NA	NA	-5588	-131	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGGCATCCTTGGCT	NA	False	NA	NA	False	AAGAAA	-12	NA	32235376	32227366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_32229842_32235269
ES.32734.1	chr8	-	1051	7	FSM	ENSMUSG00000062991.10	ENSMUST00000238826.2	1625	7	387	187	-1	-157	multi-exon	FALSE	canonical	0	0	junction_2	1.86338998124982	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTGTATTGATAAAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	32499182	32327382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ES.32735.1	chr8	-	1058	1	Intergenic	novelGene_26717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATATCAGGG	NA	False	NA	NA	False	GATAAA	-16	NA	33680449	33679391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_33679400_33680400
ES.32736.1	chr8	+	719	1	Antisense	novelGene_ENSMUSG00000083557.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCATTCCACCGCTTCCT	721	False	NA	NA	False	NA	NA	NA	33681511	33682230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_33681500_33682200
ES.32737.1	chr8	+	721	1	Intergenic	novelGene_26719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33834997	33835718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_33835000_33835700
ES.32738.1	chr8	+	6857	1	Intergenic	novelGene_26720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATAACCTAAATTGTGGG	NA	False	NA	NA	False	ATTAAA	-10	NA	33852997	33859854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_33853000_33859900
ES.32739.1	chr8	-	6523	35	NIC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	-38	12	combination_of_known_junctions	FALSE	canonical	0	0	junction_33	11.4657606734167	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGATTATATATCTGTG	NA	False	NA	NA	False	NA	NA	NA	33875593	33724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33851195_33851297_33875369
ES.32739.10	chr8	-	6352	35	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	13.1064645028591	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875539	33724405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33817094_33817185_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875469
ES.32739.11	chr8	-	6058	32	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	11.9826444038647	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875533	33724405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819242_33824203_33824274_33826024_33826175_33842101_33842215_33843322_33843428_33875369
ES.32739.12	chr8	-	6241	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	21	0	2	0	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCCTCAGATATGAT	NA	False	NA	NA	False	NA	NA	NA	33875534	33724411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ES.32739.13	chr8	-	5993	34	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	-1	-490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.389139411409	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGTTTCATCTGTATC	NA	False	NA	NA	False	NA	NA	NA	33875537	33724901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33851195_33851457_33875369
ES.32739.14	chr8	-	5772	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	0	490	0	-490	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGTTTCATCTGTATC	NA	False	NA	NA	False	NA	NA	NA	33875555	33724901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ES.32739.15	chr8	-	10422	26	NNC	ENSMUSG00000031583.14	novel	4856	28	NA	NA	6158	-491	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	16.4921314571525	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAAGTTTCATCTGTAT	NA	False	NA	NA	False	NA	NA	NA	33814420	33724902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33742503_33742540_33744253_33745302_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775426_33775632_33778966_33782585_33782761_33784931_33785120_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194
ES.32739.16	chr8	-	2408	8	NNC	ENSMUSG00000031583.14	novel	4856	28	NA	NA	61514	-491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.1912971863525	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAAGTTTCATCTGTAT	5634	False	NA	NA	False	NA	NA	NA	33759064	33724902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745569_33757845_33757886_33758750_33758849_33758923
ES.32739.17	chr8	-	5854	34	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	-3	-491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	9.8106967352777	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAAGTTTCATCTGTAT	NA	False	NA	NA	False	NA	NA	NA	33875539	33724902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833143_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.18	chr8	-	5849	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-24	-806	12	-492	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAAAGTTTCATCTGTA	NA	False	NA	NA	False	NA	NA	NA	33875524	33724903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.19	chr8	-	5871	34	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	1	-495	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	11.8111867410267	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATCTAAAGTTTCATCT	NA	False	NA	NA	False	NA	NA	NA	33875554	33724906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785113_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842217_33843322_33843428_33875369
ES.32739.2	chr8	-	6381	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-53	-1309	2	11	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATGATTATATATCTGT	NA	False	NA	NA	False	NA	NA	NA	33875553	33724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.20	chr8	-	5749	34	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	-3	-596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	9.8106967352777	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGGTGAACAGGTGT	NA	False	NA	NA	False	NA	NA	NA	33875539	33725007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833143_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.21	chr8	-	5231	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	27	1004	8	294	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTCTCATTTTTCTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	33875528	33725415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ES.32739.22	chr8	-	5054	34	NNC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	9.81041593357363	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTTGGTAAACTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33875534	33725709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842216_33843322_33843428_33875369
ES.32739.23	chr8	-	4947	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	17	1298	-2	0	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTTGGTAAACTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33875538	33725709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ES.32739.24	chr8	-	4537	30	NIC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	10.2812991864239	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTTCTTGGTAAACT	NA	False	NA	NA	False	ATTAAA	-14	NA	33875533	33725711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33875369
ES.32739.25	chr8	-	4878	34	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	-6	-81	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_33	9.54973449022498	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGAGTGCCTTCAAT	NA	False	NA	NA	False	AGTAAA	-25	NA	33875542	33725792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875469
ES.32739.27	chr8	-	4897	34	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	-1	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	9.6704181948064	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTGTGAGTGCCTTC	NA	False	NA	NA	False	AGTAAA	-22	NA	33875537	33725795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843455_33875469
ES.32739.28	chr8	-	4457	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-35	597	1	-595	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATTTTAACCTCAAA	NA	False	NA	NA	False	TATAAA	-9	NA	33875535	33726306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.29	chr8	-	4588	33	ISM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-35	4955	1	-4953	5prime_fragment	FALSE	canonical	3	28	junction_13	7.18770380145843	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTCCCACTGGTTGAT	NA	False	NA	NA	False	AGTAAA	-17	NA	33875535	33730664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.30	chr8	-	2725	19	ISM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-44	56696	-8	31832	5prime_fragment	FALSE	canonical	3	28	junction_1	7.39035073258484	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGACTGTCATCTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	33875544	33782405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.31	chr8	-	2588	9	ISM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	-33	87336	3	1192	5prime_fragment	FALSE	canonical	3	29	junction_8	5.77575752607396	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATATTCCTTCAAGTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33875533	33813045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.32	chr8	-	1998	1	Intergenic	novelGene_26718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAAACAAGGCGTTCA	8017	False	NA	NA	False	ATTAAA	-39	NA	33818156	33816158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_33816200_33818200
ES.32739.4	chr8	-	6329	35	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	12.3725684409903	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATATGATTATATATCT	NA	False	NA	NA	False	NA	NA	NA	33875537	33724402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33776043_33776120_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ES.32739.5	chr8	-	6229	33	NIC	ENSMUSG00000031583.14	novel	5019	34	NA	NA	1	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.93607497644316	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATATGATTATATATCT	NA	False	NA	NA	False	NA	NA	NA	33875535	33724402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_33726488_33730976_33731183_33738949_33739113_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ES.32739.8	chr8	-	5413	27	NNC	ENSMUSG00000031583.14	novel	4856	28	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	10.579160602489	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875538	33724405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33875469
ES.32739.9	chr8	-	6294	34	NNC	ENSMUSG00000031583.14	novel	6262	34	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	9.6704181948064	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCAGATATGATTATATA	NA	False	NA	NA	False	NA	NA	NA	33875554	33724405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843455_33875479
ES.3274.1	chr10	-	346	2	NNC	ENSMUSG00000091994.3	novel	3265	2	NA	NA	587	-2175	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	79690203	79689560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79689863_79690159
ES.32740.1	chr8	+	4349	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-689	4689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGATGTCTTGACTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	33875663	33882105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33879063
ES.32740.10	chr8	+	4017	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-436	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGGATTCTTATTTT	NA	False	NA	24	True	AATAAA	-18	NA	33875916	33907497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33879287_33906584
ES.32740.11	chr8	+	1919	4	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-434	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4.92160768674447	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAGTTTGGATTCTTAT	NA	False	NA	21	True	AATAAA	-15	NA	33875918	33907494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33879196_33879287_33906717
ES.32740.12	chr8	+	5424	2	Intergenic	novelGene_26721	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	33889247	33894741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_33892615_33892684
ES.32740.13	chr8	+	1680	1	NIC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	29425	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCACTGACAATCCAAT	NA	False	NA	-16	True	AGTAAA	-27	NA	33905777	33907457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_33905800_33907500
ES.32740.2	chr8	+	1632	2	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-679	155	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTATGTTATACATAG	NA	False	NA	NA	False	NA	NA	NA	33875673	33877571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357
ES.32740.3	chr8	+	3771	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-679	4254	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	3.5	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTGAAGAGGATGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	33875673	33881670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33879196
ES.32740.4	chr8	+	2266	4	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-607	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4.92160768674447	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTTTGGATTCTTATTT	NA	False	NA	23	True	AATAAA	-17	NA	33875745	33907496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33879196_33879326_33906584
ES.32740.5	chr8	+	5542	2	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-491	4253	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTTGAAGAGGATGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	33875861	33881669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357
ES.32740.6	chr8	+	2019	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-486	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGATTCTTATTTTTC	NA	False	NA	26	True	AATAAA	-20	NA	33875866	33907499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33906584
ES.32740.7	chr8	+	1875	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-475	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	5	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGATTCTTATTTTTC	NA	False	NA	26	True	AATAAA	-20	NA	33875877	33907499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33906717
ES.32740.8	chr8	+	3350	2	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-449	2103	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTGGAGCTGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	33875903	33879519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357
ES.32740.9	chr8	+	3670	3	NNC	ENSMUSG00000049184.7	novel	1795	2	NA	NA	-445	4254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTGAAGAGGATGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	33875907	33881670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_33876092_33876357_33877237_33879063
ES.32741.1	chr8	+	178	1	Intergenic	novelGene_26722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGACCTGTTT	4297	False	NA	NA	False	NA	NA	NA	33968531	33968709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_33968500_33968700
ES.32742.1	chr8	+	159	1	Intergenic	novelGene_26723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34002839	34002998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34002800_34003000
ES.32743.1	chr8	+	9457	11	NIC	ENSMUSG00000009628.15	novel	706	6	NA	NA	-72	3	combination_of_known_splicesites	TRUE	canonical	3	10	junction_6	4.61410879802373	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTACATGTTTTT	NA	False	NA	10	True	AATAAA	-44	NA	34006693	34075613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34006848_34017251_34017328_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.10	chr8	+	6792	5	NNC	ENSMUSG00000009628.15	novel	8405	4	NA	NA	1561	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.63068014212911	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCCTACATGTTTT	7492	False	NA	9	True	AATAAA	-43	NA	34062132	34075612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34064215_34064268_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.11	chr8	+	2698	2	ISM	ENSMUSG00000009628.15	ENSMUST00000009772.8	8405	4	9592	-2	9592	2	3prime_fragment	FALSE	canonical	3	20	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGCCTACATGTTTT	NA	False	NA	9	True	AATAAA	-43	NA	34070163	34075612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34072775_34075525
ES.32743.2	chr8	+	9650	12	NNC	ENSMUSG00000009628.15	novel	706	6	NA	NA	-65	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.35184240696572	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTACATGTTTTT	NA	False	NA	10	True	AATAAA	-44	NA	34006700	34075613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34006848_34017251_34017328_34017716_34017917_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.3	chr8	+	9543	12	NNC	ENSMUSG00000009628.15	novel	706	6	NA	NA	-59	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.46008663233769	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTACATGTTTTT	NA	False	NA	10	True	AATAAA	-44	NA	34006706	34075613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34006848_34006973_34007073_34017251_34017328_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.4	chr8	+	8416	12	NNC	ENSMUSG00000009628.15	novel	706	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.78428168313005	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTACATGTTTTT	NA	False	NA	10	True	AATAAA	-44	NA	34006765	34075613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34006848_34017251_34017328_34017716_34017917_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34072708_34072775_34075525
ES.32743.5	chr8	+	3298	13	NNC	ENSMUSG00000009628.15	novel	706	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.98435971133566	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGCCTACATGTTT	NA	False	NA	8	True	AATAAA	-42	NA	34006767	34075611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34006848_34017251_34017328_34017716_34017917_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34061098_34067380_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.6	chr8	+	9433	11	NIC	ENSMUSG00000009628.15	novel	2626	11	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	5.53624421426656	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGCCTACATGTTT	NA	False	NA	8	True	AATAAA	-42	NA	34007323	34075611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34007456_34017251_34017328_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.7	chr8	+	9332	10	NIC	ENSMUSG00000009628.15	novel	2626	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	6.43102050155013	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTGCCTACATGTT	NA	False	NA	7	True	AATAAA	-41	NA	34007347	34075610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34007456_34029640_34029777_34036214_34036381_34047229_34047468_34053003_34053151_34055070_34055234_34060602_34067607_34068978_34069029_34071539_34072775_34075525
ES.32743.8	chr8	+	344	1	Intergenic	novelGene_26724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	34035588	34035932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34035600_34035900
ES.32743.9	chr8	+	206	1	Intergenic	novelGene_26725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGGTCCTGAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	34035590	34035796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34035600_34035800
ES.32744.1	chr8	-	157	1	Intergenic	novelGene_26726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATATAATTTCT	NA	False	NA	NA	False	NA	NA	NA	34069540	34069383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34069400_34069500
ES.32745.1	chr8	+	1964	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	-82	-413	-82	413	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATACTTAGAACTGT	8783	False	NA	74	True	ATTAAA	-27	NA	34089570	34109882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ES.32745.2	chr8	+	1438	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	-48	79	-48	-79	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGTTAGCACAATGTGAA	8817	False	NA	111	True	ATTAAA	-37	NA	34089604	34109390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ES.32745.3	chr8	+	1868	8	NNC	ENSMUSG00000009630.11	novel	1469	7	NA	NA	-24	1294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	335.727537732365	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCTTAAGACAGACTTA	8841	False	NA	NA	False	NA	NA	NA	34089628	34110763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149_34109826_34110744
ES.32745.5	chr8	+	3018	6	NIC	ENSMUSG00000009630.11	novel	1469	7	NA	NA	5	355	intron_retention	FALSE	canonical	3	909	junction_3	36.1020775025482	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTTTAACTGTG	8870	False	NA	16	True	AATAAA	-16	NA	34089657	34109824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34107174_34109149
ES.32745.7	chr8	+	1432	6	ISM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	11028	-355	11028	355	3prime_fragment	FALSE	canonical	3	909	junction_2	28.2233945513292	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATTTTTTAACTGTG	NA	False	NA	16	True	AATAAA	-16	NA	34100680	34109824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ES.32746.1	chr8	+	197	1	Intergenic	novelGene_26728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTGTTAATTTCTACT	NA	False	NA	NA	False	NA	NA	NA	34114915	34115112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34114900_34115100
ES.32747.1	chr8	+	3687	1	Antisense	novelGene_ENSMUSG00000052906.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGTGGAGAGGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	34131820	34135507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_34131800_34135500
ES.32747.10	chr8	+	4702	11	NIC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	218	-7	intron_retention	FALSE	canonical	3	1474	junction_2	144.049435958632	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTATGCTGCTGTCAGTG	620	False	NA	7	True	TATAAA	-10	NA	34143483	34188184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34143808_34159180_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.11	chr8	+	2451	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	223	-1	223	1	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCAGTGTATTTTCT	625	False	NA	15	True	TATAAA	-18	NA	34143488	34188192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.12	chr8	+	1829	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	224	620	224	-620	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCTTGTGTTTGTTGT	626	False	NA	NA	False	NA	NA	NA	34143489	34187571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.13	chr8	+	3973	12	NIC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	239	-2	intron_retention	FALSE	canonical	3	1474	junction_3	152.507688466262	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	641	False	NA	12	True	TATAAA	-15	NA	34143504	34188189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34143808_34159180_34159208_34159920_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.14	chr8	+	1007	9	ISM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	286	12445	286	66	5prime_fragment	FALSE	canonical	3	1474	junction_4	176.097984088405	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGATTCATAATTAATAAT	688	False	NA	NA	False	AATAAA	-20	NA	34143551	34175746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571
ES.32747.16	chr8	+	2142	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	320	211	320	-211	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGGTTAGGTAAAGG	722	False	NA	-85	True	ATTAAA	-9	NA	34143585	34187980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.17	chr8	+	4194	13	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	333	-3	at_least_one_novel_splicesite	FALSE	canonical	1	108	junction_8	455.516091617214	1061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTGTCAGTGTATT	735	False	NA	11	True	TATAAA	-14	NA	34143598	34188188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34174565_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.18	chr8	+	2332	12	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	339	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	516.35512156872	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	741	False	NA	12	True	TATAAA	-15	NA	34143604	34188189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143812_34159897_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.19	chr8	+	3030	8	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	352	-2029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	613.232119717372	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTAAGGGTTTTGTTTTGT	754	False	NA	NA	False	AATAAA	-18	NA	34143617	34173651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34160970_34161190_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620
ES.32747.2	chr8	+	1421	1	Intergenic	novelGene_26730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTATGGCTTCCAGT	NA	False	NA	NA	False	NA	NA	NA	34132019	34133440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34132000_34133400
ES.32747.20	chr8	+	2781	14	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	353	637	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	476.310922270901	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTGAAGGACCAGGGATA	755	False	NA	NA	False	NA	NA	NA	34143618	34188828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173_34188593_34188768
ES.32747.22	chr8	+	4346	12	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	359	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	516.954015890635	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCAGTGTATTTT	761	False	NA	13	True	TATAAA	-16	NA	34143624	34188190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34160970_34161190_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.24	chr8	+	1644	12	ISM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	359	2683	359	-2683	5prime_fragment	FALSE	canonical	3	1474	junction_4	152.422151922528	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATGTAGTGGCAA	761	False	NA	NA	False	AATAAA	-3	NA	34143624	34185508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026
ES.32747.26	chr8	+	2126	14	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	371	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	476.310922270901	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTGTCAGTGTATT	773	False	NA	11	True	TATAAA	-14	NA	34143636	34188188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173_34187224_34187396
ES.32747.27	chr8	+	3619	13	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	371	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	495.356850888551	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTGTCAGTGTATT	773	False	NA	11	True	TATAAA	-14	NA	34143636	34188188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34160970_34161190_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.28	chr8	+	2273	13	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	382	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	494.564595264248	1061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	784	False	NA	12	True	TATAAA	-15	NA	34143647	34188189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143808_34159180_34159208_34159920_34159994_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.29	chr8	+	3256	12	NIC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	443	-2	intron_retention	FALSE	canonical	3	1474	junction_4	118.603513389907	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	845	False	NA	12	True	TATAAA	-15	NA	34143708	34188189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.3	chr8	+	5357	14	NNC	ENSMUSG00000031584.17	novel	347	5	NA	NA	-10530	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	810.299323758104	1069	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCTGTCAGTGTATTT	NA	False	NA	12	True	TATAAA	-15	NA	34132020	34188189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34135045_34142259_34142473_34159180_34159208_34159920_34160010_34161550_34161623_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183943_34185021_34185161_34187173
ES.32747.30	chr8	+	2293	13	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	524	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	494.744939898889	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGCTGCTGTCAGTGT	926	False	NA	8	True	TATAAA	-11	NA	34143789	34188185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143958_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.31	chr8	+	160	1	Intergenic	novelGene_26734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1030	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATACATAAATATT	NA	False	NA	NA	False	NA	NA	NA	34186235	34186395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34186200_34186400
ES.32747.4	chr8	+	3258	2	Intergenic	novelGene_26731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGAGATCTTTAATC	NA	False	NA	NA	False	AATAAA	-12	NA	34132031	34135433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34132200_34132343
ES.32747.5	chr8	+	965	1	Genic_Genomic	ENSMUSG00000031584.17	novel	NA	NA	NA	NA	-433	-21145	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAGAAAATAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	34142117	34143082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_34142100_34143100
ES.32747.6	chr8	+	2462	13	NNC	ENSMUSG00000031584.17	novel	347	5	NA	NA	-409	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	492.898083617023	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGTGTATTTTC	NA	False	NA	14	True	TATAAA	-17	NA	34142141	34188191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34142473_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.7	chr8	+	2148	13	NNC	ENSMUSG00000031584.17	novel	347	5	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	494.744939898889	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGCTGCTGTCAGTGT	NA	False	NA	8	True	TATAAA	-11	NA	34142552	34188185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34142576_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.8	chr8	+	2159	13	NIC	ENSMUSG00000031584.17	novel	347	5	NA	NA	14	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	494.744939898889	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGCTGCTGTCAGTGT	NA	False	NA	8	True	TATAAA	-11	NA	34142564	34188185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34142599_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32747.9	chr8	+	2462	12	NNC	ENSMUSG00000031584.17	novel	2673	13	NA	NA	204	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	516.35512156872	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGTGTATTTTC	606	False	NA	14	True	TATAAA	-17	NA	34143469	34188191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34143812_34159904_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ES.32748.1	chr8	-	1917	1	Intergenic	novelGene_26727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4747	False	NA	NA	False	NA	NA	NA	34092585	34090668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34090700_34092600
ES.32749.1	chr8	-	3640	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-9	-823	-9	823	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCCTGAAAGGATGCA	4661	False	NA	NA	False	AATAAA	-24	NA	34132004	34108790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.10	chr8	-	1134	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	2	1672	2	-1672	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAACCCTAGCTCATA	4672	False	NA	NA	False	NA	NA	NA	34131993	34111285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.11	chr8	-	3223	5	NNC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	2	-4350	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.416635779586	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAGCAACAACAACAACA	4672	False	NA	NA	False	NA	NA	NA	34131993	34120701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34123382_34123422_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.12	chr8	-	177	1	Intergenic	novelGene_26729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8438	False	NA	NA	False	NA	NA	NA	34128227	34128050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34128000_34128200
ES.32749.2	chr8	-	3484	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	2	-678	2	678	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTGCCTTTTCTGTCA	4672	False	NA	NA	False	NA	NA	NA	34131993	34108935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.3	chr8	-	2815	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-7	0	-7	0	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGTCAGCTTGTGAAT	4663	False	NA	NA	False	AATAAA	-21	NA	34132002	34109613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.4	chr8	-	2206	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	0	602	0	-602	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAATGAAATGCTTAGATA	4670	False	NA	NA	False	AATAAA	-14	NA	34131995	34110215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.5	chr8	-	1693	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-54	1169	-54	-1169	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTCTTAAGGTATCT	4616	False	NA	-2	True	NA	NA	NA	34132049	34110782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.6	chr8	-	1513	7	NIC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	0	-1169	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	92.217135067188	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTCTTAAGGTATCT	4670	False	NA	-2	True	NA	NA	NA	34131995	34110782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34125316_34125388_34128507_34128631_34131877
ES.32749.7	chr8	-	2835	7	NIC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	10	-1424	intron_retention	FALSE	canonical	3	227	junction_6	20.7879505697144	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAATGTGAACTGTCG	4680	False	NA	-1	True	AGTAAA	-23	NA	34131985	34111037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.8	chr8	-	1394	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	-10	1424	-10	-1424	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAATGTGAACTGTCG	4660	False	NA	-1	True	AGTAAA	-23	NA	34132005	34111037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.32749.9	chr8	-	1236	7	NIC	ENSMUSG00000052906.8	novel	2808	8	NA	NA	8	-1426	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	91.5764707771598	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAATGTGAACTGT	4678	False	NA	-3	True	AGTAAA	-21	NA	34131987	34111039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34111729_34113189_34113265_34116351_34116394_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ES.3275.1	chr10	+	3034	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-201	336	1	3	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1384	False	NA	26	True	AATAAA	-16	NA	79690261	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.11	chr10	+	4637	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	1	2	intron_retention	FALSE	canonical	3	638	junction_6	288.820485297135	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1562	False	NA	25	True	AATAAA	-15	NA	79690439	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.12	chr10	+	3056	12	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	5	2	intron_retention	FALSE	canonical	3	18	junction_8	478.559840209307	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1566	False	NA	25	True	AATAAA	-15	NA	79690443	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79696029_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.13	chr10	+	2801	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	6	2	intron_retention	FALSE	canonical	1	1	junction_9	476.711033774363	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1567	False	NA	33	True	ATTAAA	-17	NA	79690444	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698302_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.14	chr10	+	2815	12	FSM	ENSMUSG00000006498.17	ENSMUST00000057343.16	1765	12	-40	-1010	7	2	multi-exon	FALSE	canonical	3	18	junction_8	513.000459136617	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1568	False	NA	25	True	AATAAA	-15	NA	79690445	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.15	chr10	+	2882	12	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	7	-4	intron_retention	FALSE	canonical	3	18	junction_8	485.578959202141	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTCTTCCCTGAGC	1568	False	NA	27	True	ATTAAA	-11	NA	79690445	79700189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695790_79695950_79696029_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.17	chr10	+	4522	11	NIC	ENSMUSG00000006498.17	novel	2598	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	18	junction_7	534.744013524228	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1568	False	NA	31	True	ATTAAA	-15	NA	79690445	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.18	chr10	+	4957	11	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	638	junction_6	302.912941288417	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1568	False	NA	31	True	ATTAAA	-15	NA	79690445	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.19	chr10	+	2824	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	7	6	intron_retention	FALSE	canonical	3	18	junction_9	472.699252520388	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGAGCCCTTCATTCT	1568	False	NA	37	True	ATTAAA	-21	NA	79690445	79700199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.2	chr10	+	4279	11	NNC	ENSMUSG00000006498.17	novel	2598	13	NA	NA	35	-2	intron_retention	FALSE	canonical	0	0	junction_3	541.997564570174	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTCCTGCCTGTCATT	1418	False	NA	21	True	AATAAA	-11	NA	79690295	79700264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694946_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.20	chr10	+	2316	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	-17	870	7	83	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGAGCTTCTATGTCCC	1568	False	NA	NA	False	NA	NA	NA	79690445	79699735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.21	chr10	+	4292	11	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	638	junction_7	302.42501549971	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1568	False	NA	23	True	AATAAA	-13	NA	79690445	79700266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.22	chr10	+	2902	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	8	2	intron_retention	FALSE	canonical	3	638	junction_6	288.279163369568	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1569	False	NA	33	True	ATTAAA	-17	NA	79690446	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.23	chr10	+	2849	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	638	junction_6	285.436913178654	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1572	False	NA	31	True	ATTAAA	-15	NA	79690449	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.24	chr10	+	6175	10	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	11	3	intron_retention	FALSE	canonical	3	638	junction_5	314.217546719891	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1572	False	NA	26	True	AATAAA	-16	NA	79690449	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79694659_79694785_79695106_79695185_79695357_79695435_79695790_79696657_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.25	chr10	+	2833	13	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	11	3	intron_retention	TRUE	canonical	0	0	junction_4	499.01243443648	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1572	False	NA	26	True	AATAAA	-16	NA	79690449	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695198_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.27	chr10	+	2844	12	NNC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_8	517.288464371574	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1580	False	NA	25	True	AATAAA	-15	NA	79690457	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698241_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.28	chr10	+	1985	14	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-5	2	intron_retention	FALSE	non_canonical	0	0	junction_13	479.988325794918	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1580	False	NA	33	True	ATTAAA	-17	NA	79690457	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978_79699153_79699931
ES.3275.29	chr10	+	2832	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	-5	2	intron_retention	FALSE	canonical	3	638	junction_6	285.781862138367	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1580	False	NA	33	True	ATTAAA	-17	NA	79690457	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.3	chr10	+	2992	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	122	-4	-56	4	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTGTCATTGGGCGG	1505	False	NA	27	True	AATAAA	-17	NA	79690382	79700270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.30	chr10	+	2700	14	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-5	-5	intron_retention	FALSE	canonical	0	0	junction_3	462.59792502419	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTGTCTTCCCTGAG	1580	False	NA	26	True	ATTAAA	-10	NA	79690457	79700188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694612_79694873_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.31	chr10	+	4393	10	NIC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	-5	2	intron_retention	FALSE	canonical	3	638	junction_7	305.716644405676	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1580	False	NA	25	True	AATAAA	-15	NA	79690457	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79698704_79698811_79698890_79698978
ES.3275.32	chr10	+	5991	10	NIC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	-5	2	intron_retention	FALSE	canonical	3	638	junction_6	318.38985342726	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1580	False	NA	33	True	ATTAAA	-17	NA	79690457	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.35	chr10	+	2737	12	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_3	515.245476279459	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1587	False	NA	25	True	AATAAA	-15	NA	79690464	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694946_79695106_79695185_79695357_79695435_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.36	chr10	+	2976	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-2	2	intron_retention	FALSE	canonical	3	966	junction_7	243.984232186335	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1587	False	NA	25	True	AATAAA	-15	NA	79690464	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.37	chr10	+	3872	12	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	638	junction_7	288.352143528856	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1587	False	NA	23	True	AATAAA	-13	NA	79690464	79700266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.38	chr10	+	2828	12	NNC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_8	517.288464371574	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1588	False	NA	25	True	AATAAA	-15	NA	79690465	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.39	chr10	+	2914	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-1	2	intron_retention	FALSE	canonical	3	966	junction_7	248.260391972264	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1588	False	NA	33	True	ATTAAA	-17	NA	79690465	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.4	chr10	+	2423	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	140	547	-38	67	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGTATGTGTGTATTC	1523	False	NA	NA	False	NA	NA	NA	79690400	79699719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.40	chr10	+	3024	15	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_2	565.835268448696	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1588	False	NA	25	True	AATAAA	-15	NA	79690465	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694032_79694150_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.41	chr10	+	2634	13	FSM	ENSMUSG00000006498.17	ENSMUST00000095457.11	2598	13	-36	0	-1	0	multi-exon	FALSE	canonical	3	61	junction_3	485.428926883798	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1588	False	NA	31	True	ATTAAA	-15	NA	79690465	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694905_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.42	chr10	+	2442	11	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_8	619.136463148473	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1589	False	NA	33	True	ATTAAA	-17	NA	79690466	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696675_79698590_79698704_79698811_79698890_79698978
ES.3275.43	chr10	+	3149	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	1	-4	intron_retention	FALSE	canonical	3	638	junction_7	289.074470658993	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGTCTTCCCTGAGC	1590	False	NA	27	True	ATTAAA	-11	NA	79690467	79700189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.44	chr10	+	2765	14	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_13	479.988325794918	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1590	False	NA	25	True	AATAAA	-15	NA	79690467	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978_79699773_79699834
ES.3275.45	chr10	+	4263	10	NIC	ENSMUSG00000006498.17	novel	1765	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	638	junction_6	314.737437113839	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCCCTGAGCCCT	1591	False	NA	30	True	ATTAAA	-14	NA	79690468	79700192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695790_79696657_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.47	chr10	+	2902	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	3	2	intron_retention	TRUE	non_canonical	0	0	junction_8	600.889826285429	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1592	False	NA	25	True	AATAAA	-15	NA	79690469	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696661_79696808_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.49	chr10	+	2826	12	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_1	619.779846277079	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCCCTGAGCCCTTC	1595	False	NA	32	True	ATTAAA	-16	NA	79690472	79700194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79694553_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.5	chr10	+	2923	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-19	3	intron_retention	FALSE	canonical	3	24	junction_1	471.055751300558	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1542	False	NA	26	True	AATAAA	-16	NA	79690419	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.50	chr10	+	2764	13	NNC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	3	2	intron_retention	FALSE	canonical	2	3	junction_2	496.921830427639	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1600	False	NA	33	True	ATTAAA	-17	NA	79690477	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.51	chr10	+	2639	12	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_1	497.285972899875	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1610	False	NA	33	True	ATTAAA	-17	NA	79690487	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690541_79694839_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.52	chr10	+	2844	12	NIC	ENSMUSG00000006498.17	novel	2369	13	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	18	junction_8	485.168472059955	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTCTGTCTTCCCTGA	1615	False	NA	25	True	ATTAAA	-9	NA	79690492	79700187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.54	chr10	+	3133	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	37	-1	1	1	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCACGTAATAGCATAAG	1622	False	NA	NA	False	ATTAAA	-17	NA	79690499	79700606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.55	chr10	+	1780	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	239	1091	1	-83	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTACAGACCAGAGATT	1622	False	NA	NA	False	AAAAAG	-11	NA	79690499	79699175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.56	chr10	+	2792	14	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	456.425175498024	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1622	False	NA	31	True	ATTAAA	-15	NA	79690499	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695345_79695429_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.57	chr10	+	2862	12	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_1	619.779846277079	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	1622	False	NA	26	True	AATAAA	-16	NA	79690499	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79694565_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.59	chr10	+	4984	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	29	0	intron_retention	FALSE	canonical	3	966	junction_7	247.913963570698	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1653	False	NA	31	True	ATTAAA	-15	NA	79690530	79700193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.6	chr10	+	2814	14	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	61	junction_3	448.739694711163	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTCCTGCCTGTCATT	1557	False	NA	21	True	AATAAA	-11	NA	79690434	79700264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694905_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.60	chr10	+	2829	13	NNC	ENSMUSG00000006498.17	novel	848	7	NA	NA	-159	2	intron_retention	FALSE	canonical	1	1	junction_1	497.189008046459	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1835	False	NA	33	True	ATTAAA	-17	NA	79690712	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690876_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.61	chr10	+	3321	13	NNC	ENSMUSG00000006498.17	novel	848	7	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_1	497.418725912977	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1991	False	NA	25	True	AATAAA	-15	NA	79690868	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79691451_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.62	chr10	+	3534	14	NNC	ENSMUSG00000006498.17	novel	848	7	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_1	460.523872004905	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCCTGAGCCCTTCA	1993	False	NA	33	True	ATTAAA	-17	NA	79690870	79700195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79691661_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.63	chr10	+	3364	13	NNC	ENSMUSG00000006498.17	novel	848	7	NA	NA	164	2	intron_retention	FALSE	canonical	0	0	junction_1	497.418725912977	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	2158	False	NA	25	True	AATAAA	-15	NA	79691035	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79691661_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.64	chr10	+	4076	13	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	818	-2	207	2	3prime_fragment	FALSE	canonical	3	966	junction_7	247.782652854383	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	2201	False	NA	25	True	AATAAA	-15	NA	79691078	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.65	chr10	+	4087	11	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-276	3	intron_retention	FALSE	canonical	3	966	junction_6	269.213001171934	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTGTCATTGGGCG	464	False	NA	26	True	AATAAA	-16	NA	79694329	79700269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.66	chr10	+	5525	1	FSM	ENSMUSG00000098562.3	ENSMUST00000184090.3	66	1	-3749	-1710	-3749	1710	mono-exon	FALSE	NA	NA	NA	NA	NA	1400	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCCTGAGCCCTTCAT	75	False	NA	34	True	ATTAAA	-18	NA	79694671	79700196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79694700_79700200
ES.3275.67	chr10	+	2717	11	ISM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	4521	-2	-46	2	3prime_fragment	FALSE	canonical	3	966	junction_5	270.489186475171	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	185	False	NA	25	True	AATAAA	-15	NA	79694781	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.68	chr10	+	4951	7	NIC	ENSMUSG00000006498.17	novel	2598	13	NA	NA	-45	2	intron_retention	FALSE	canonical	3	1464	junction_1	98.5146633191673	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	186	False	NA	25	True	AATAAA	-15	NA	79694782	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.7	chr10	+	2943	13	NNC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_9	476.947411496628	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGCCTGTCATTGGGC	1559	False	NA	25	True	AATAAA	-15	NA	79690436	79700268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698241_79698376_79698486_79698704_79698811_79698890_79698978
ES.3275.9	chr10	+	4377	12	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	966	junction_8	258.090540843184	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1561	False	NA	23	True	AATAAA	-13	NA	79690438	79700266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79698376_79698486_79698704_79698811_79698890_79698978
ES.32750.1	chr8	-	260	1	Intergenic	novelGene_26732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTTTAACATTA	5944	False	NA	NA	False	NA	NA	NA	34141098	34140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34140800_34141100
ES.32751.1	chr8	-	169	1	Intergenic	novelGene_26733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAATAAGTAAAATT	7324	False	NA	NA	False	NA	NA	NA	34149258	34149089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34149100_34149300
ES.32752.1	chr8	-	217	1	Intergenic	novelGene_26735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAGCAACGAAACACTCT	NA	False	NA	NA	False	NA	NA	NA	34190932	34190715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34190700_34190900
ES.32753.1	chr8	+	1596	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	47	-9	47	0	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTGTTTTAAAAAGC	5072	False	NA	18	True	AATAAA	-22	NA	34221907	34267201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.10	chr8	+	2084	8	NIC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	430.755150868797	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATGTTAATGCTT	5217	False	NA	5	True	AATAAA	-9	NA	34222052	34267188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34222663_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.11	chr8	+	8534	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-12	-6956	-12	6947	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTGATAGAGGCTG	5222	False	NA	NA	False	AAAACA	-36	NA	34222057	34274148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.12	chr8	+	5545	6	ISM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	25	10229	25	8368	5prime_fragment	FALSE	canonical	3	804	junction_1	222.34261849677	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAATTTTATTTTATTT	5259	False	NA	NA	False	AATAAA	-33	NA	34222094	34256963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037
ES.32753.13	chr8	+	1351	8	NNC	ENSMUSG00000031585.14	novel	1566	8	NA	NA	25	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	469.591920105714	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATTCAGTTTGTCTCTT	5259	False	NA	34	True	AATAAA	-31	NA	34222094	34267009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266081_34266480
ES.32753.14	chr8	+	1194	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	26	346	26	40	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGTGTCTGCTATTTA	5260	False	NA	1	True	NA	NA	NA	34222095	34266846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.15	chr8	+	1405	7	NIC	ENSMUSG00000031585.14	novel	1566	8	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	482.189796656877	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5287	False	NA	9	True	AATAAA	-13	NA	34222122	34267192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34222158_34225761_34225935_34242468_34242561_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.16	chr8	+	1438	9	NNC	ENSMUSG00000031585.14	novel	1566	8	NA	NA	-30	-192	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	574.008874060323	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTTAGGAAATTCAGT	5295	False	NA	25	True	AATAAA	-22	NA	34222130	34267000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222158_34223609_34223735_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.17	chr8	+	1136	7	NIC	ENSMUSG00000031585.14	novel	1566	8	NA	NA	-29	191	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	496.33948955215	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAAGTTAGGAAATTC	5296	False	NA	22	True	AATAAA	-19	NA	34222131	34266997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34222158_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.18	chr8	+	2029	8	NNC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	465.252838875415	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATGTTAATGCTT	5312	False	NA	5	True	AATAAA	-9	NA	34222147	34267188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222703_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.19	chr8	+	1839	8	NNC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	-12	193	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	465.252838875415	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAGTTAGGAAATTCAG	5313	False	NA	24	True	AATAAA	-21	NA	34222148	34266999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222703_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.2	chr8	+	1407	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	52	175	52	-175	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCTCTTACTTCTTG	5077	False	NA	42	True	AATAAA	-39	NA	34221912	34267017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.20	chr8	+	1787	8	NIC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	1	-192	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	430.755150868797	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTTAGGAAATTCAGT	5326	False	NA	25	True	AATAAA	-22	NA	34222161	34267000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34222663_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.21	chr8	+	2097	9	NNC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	574.439944641735	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAATGCTTTGTTTTA	5336	False	NA	12	True	AATAAA	-16	NA	34222171	34267195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222663_34223609_34223735_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.22	chr8	+	1677	8	FSM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	-24	11	4	-2	multi-exon	FALSE	canonical	2	96	junction_1	434.890697034723	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGTTAATGCTTTG	5507	False	NA	7	True	AATAAA	-11	NA	34222342	34267190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222544_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.23	chr8	+	2847	7	ISM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	1834	201	730	-192	3prime_fragment	FALSE	canonical	3	1161	junction_5	81.0440552347234	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTTAGGAAATTCAGT	7365	False	NA	25	True	AATAAA	-22	NA	34224200	34267000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.24	chr8	+	1276	7	NNC	ENSMUSG00000031585.14	novel	1634	8	NA	NA	2289	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	495.288019461628	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTAAGAAGTTAGG	8924	False	NA	16	True	AATAAA	-13	NA	34225759	34266991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266085_34266480
ES.32753.25	chr8	+	877	3	NNC	ENSMUSG00000031585.14	novel	1634	8	NA	NA	-210	-4	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	654.5	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAATGTTAATGCTT	NA	False	NA	5	True	AATAAA	-9	NA	34254819	34267188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34254873_34265971_34266088_34266480
ES.32753.26	chr8	+	964	4	NNC	ENSMUSG00000031585.14	novel	471	3	NA	NA	-170	13	at_least_one_novel_splicesite	FALSE	non_canonical	1	30	junction_1	622.089132591857	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTAAGCCAGCATTT	NA	False	NA	31	True	AATAAA	-35	NA	34254859	34267214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34254945_34255029_34255059_34265971_34266088_34266480
ES.32753.27	chr8	+	750	4	NNC	ENSMUSG00000031585.14	novel	471	3	NA	NA	-159	-181	at_least_one_novel_splicesite	FALSE	non_canonical	1	30	junction_1	622.089132591857	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTTGTCTCTTAC	NA	False	NA	36	True	AATAAA	-33	NA	34254870	34267011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34254945_34255029_34255059_34265971_34266088_34266480
ES.32753.28	chr8	+	4990	1	NIC	ENSMUSG00000031585.14	novel	1634	8	NA	NA	6978	191	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAAGTTAGGAAATTC	NA	False	NA	22	True	AATAAA	-19	NA	34262007	34266997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34262000_34267000
ES.32753.3	chr8	+	4766	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	65	-3197	65	3188	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGCATTTTGAGTAT	5090	False	NA	NA	False	TTTAAA	-5	NA	34221925	34270389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.4	chr8	+	7081	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	93	-5540	93	5531	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATTTATAAAAGCATAAT	5118	False	NA	NA	False	AATACA	-14	NA	34221953	34272732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.5	chr8	+	1501	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-116	181	93	-181	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTTGTCTCTTAC	5118	False	NA	36	True	AATAAA	-33	NA	34221953	34267011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.6	chr8	+	1704	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	-116	-22	93	13	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTAAGCCAGCATTT	5118	False	NA	31	True	AATAAA	-35	NA	34221953	34267214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.7	chr8	+	1618	9	NNC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	-39	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	555.835955453585	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTAAGAAGTTAGG	5195	False	NA	16	True	AATAAA	-13	NA	34222030	34266991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222158_34222329_34222544_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32753.8	chr8	+	1708	10	NNC	ENSMUSG00000031585.14	novel	1566	8	NA	NA	-20	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	624.749806712779	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGGAAATTCAGTTTG	5214	False	NA	28	True	AATAAA	-25	NA	34222049	34267003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34222158_34222516_34222703_34223609_34223735_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ES.32754.1	chr8	+	7165	1	Intergenic	novelGene_26741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCATTAATCTCACAG	NA	False	NA	NA	False	NA	NA	NA	34309066	34316231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34309100_34316200
ES.32755.1	chr8	+	1701	1	Antisense	novelGene_ENSMUSG00000098166.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTTCTATGAATTCAAC	NA	False	NA	NA	False	AAAACA	-3	NA	34375093	34376794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_34375100_34376800
ES.32756.1	chr8	+	160	1	Intergenic	novelGene_26745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	34383257	34383417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34383300_34383400
ES.32756.2	chr8	+	188	2	Antisense	novelGene_ENSMUSG00000031586.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAAAAAAATTGGTTAT	NA	False	NA	NA	False	NA	NA	NA	34383259	34392180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_34383429_34392161
ES.32756.3	chr8	+	5581	1	Intergenic	novelGene_26746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAACTTCAGGGGGCTCT	NA	False	NA	NA	False	NA	NA	NA	34385693	34391274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34385700_34391300
ES.32757.1	chr8	+	2253	1	Intergenic	novelGene_26747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAGACTGTGACATTA	NA	False	NA	NA	False	NA	NA	NA	34404642	34406895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34404600_34406900
ES.32758.1	chr8	+	4150	3	Intergenic	novelGene_26749	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCATCATATATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	34420087	34424663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34422191_34422288_34422633_34422960
ES.32758.2	chr8	+	805	1	Intergenic	novelGene_26750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-14	NA	34421823	34422628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34421800_34422600
ES.32759.1	chr8	-	2597	1	Intergenic	novelGene_26736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACAGGAAGGAACTG	NA	False	NA	NA	False	AAAACA	-11	NA	34235319	34232722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34232700_34235300
ES.3276.1	chr10	-	2378	8	NIC	ENSMUSG00000035835.15	novel	2766	7	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.12485826771597	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGTCTGGAATTTTTTT	1441	False	NA	NA	False	AATAAA	-14	NA	79710262	79700615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79702016_79702245_79702420_79702501_79702560_79702668_79702865_79703005_79703142_79703221_79703408_79709853_79709942_79710122
ES.3276.3	chr10	-	177	1	Intergenic	novelGene_2553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4806	False	NA	NA	False	NA	NA	NA	79706897	79706720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79706700_79706900
ES.32760.1	chr8	-	175	1	Intergenic	novelGene_26737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	34240901	34240726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34240700_34240900
ES.32761.1	chr8	-	157	1	Intergenic	novelGene_26738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATCAT	NA	False	NA	NA	False	NA	NA	NA	34245148	34244991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34245000_34245100
ES.32762.1	chr8	-	449	1	Antisense	novelGene_ENSMUSG00000031585.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATCAAATGATAAA	NA	False	NA	NA	False	NA	NA	NA	34246194	34245745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_34245700_34246200
ES.32762.2	chr8	-	230	1	Antisense	novelGene_ENSMUSG00000031585.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAGTCCGATGTCTAA	NA	False	NA	NA	False	AAAAAG	-34	NA	34246195	34245965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_34246000_34246200
ES.32763.1	chr8	-	177	1	Intergenic	novelGene_26739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	34247222	34247045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34247000_34247200
ES.32764.1	chr8	-	177	1	Intergenic	novelGene_26740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAATAAAATAAA	3377	False	NA	NA	False	NA	NA	NA	34257173	34256996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34257000_34257200
ES.32765.1	chr8	-	4806	1	Antisense	novelGene_ENSMUSG00000031585.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGTGGAGTCTATGG	NA	False	NA	NA	False	NA	NA	NA	34267628	34262822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_34262800_34267600
ES.32766.1	chr8	-	3041	1	Genic_Genomic	ENSMUSG00000031586.18	novel	NA	NA	NA	NA	14384	2853	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAACAAAATGA	NA	False	NA	NA	False	NA	NA	NA	34272858	34269817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_34269800_34272900
ES.32766.10	chr8	-	2270	7	NIC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	567.889195960699	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34419847	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34285109_34285179_34296744_34296879_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.11	chr8	-	6490	2	ISM	ENSMUSG00000031586.18	ENSMUST00000183336.8	549	5	12496	-1415	2874	1	3prime_fragment	FALSE	canonical	3	376	junction_1	0	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGATTTGTCTGACAA	NA	False	NA	NA	False	AATAAA	-16	NA	34284368	34272673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34274215_34279419
ES.32766.12	chr8	-	3032	8	NNC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	537.180849720206	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATGATTTGTCTGACAA	NA	False	NA	NA	False	AATAAA	-16	NA	34419832	34272673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34285179_34296744_34296879_34323703_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.14	chr8	-	7778	3	ISM	ENSMUSG00000031586.18	ENSMUST00000183336.8	549	5	5621	-1414	-4001	0	intron_retention	FALSE	canonical	3	376	junction_1	31.5	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATGATTTGTCTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	34291243	34272674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34274215_34279419_34279524_34285109
ES.32766.15	chr8	-	5189	4	NNC	ENSMUSG00000031586.18	novel	549	5	NA	NA	-1449	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	193.811477701629	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACATGATTTGTCTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	34288691	34272675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34279419_34279524_34285109_34287921_34287956
ES.32766.16	chr8	-	1839	4	NNC	ENSMUSG00000031586.18	novel	865	6	NA	NA	14620	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	459.855291248115	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACATGATTTGTCTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	34319079	34272675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34285179_34296744_34296879_34318982
ES.32766.17	chr8	-	7108	2	NNC	ENSMUSG00000031586.18	novel	525	3	NA	NA	-756	-2	intron_retention	FALSE	canonical	1	2	junction_1	0	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTACATGATTTGTCTGA	NA	False	NA	NA	False	AATAAA	-13	NA	34287998	34272676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34285109
ES.32766.18	chr8	-	1225	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-161	1402	-161	7	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAATGCATGGTCTG	NA	False	NA	NA	False	AATAAA	-45	NA	34420052	34274072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.19	chr8	-	1279	9	FSM	ENSMUSG00000031586.18	ENSMUST00000182987.8	1385	9	-170	276	-123	4	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTGTTATTTGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	34420014	34274084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.2	chr8	-	2619	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	-152	-1	-152	1	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTGTCTGACAACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	34420043	34272669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.20	chr8	-	1054	8	NIC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-49	4	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	603.987869860625	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTGTTATTTGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	34419940	34274084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.21	chr8	-	925	7	NIC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	-25	3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	567.889195960699	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAATGTGTTATTTGTG	NA	False	NA	NA	False	AATAAA	-32	NA	34419916	34274085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34285109_34285179_34296744_34296879_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.23	chr8	-	580	5	NNC	ENSMUSG00000031586.18	novel	865	6	NA	NA	14566	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	401.900796217176	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAGAAATGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	34319133	34274092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34318982
ES.32766.24	chr8	-	1087	8	NNC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	15124	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	546.563400732622	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAGAAATGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	34404180	34274092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34403749
ES.32766.25	chr8	-	1179	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	649.482871213706	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAGAAATGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	34419892	34274092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34285179_34286897_34287032_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.26	chr8	-	980	8	FSM	ENSMUSG00000031586.18	ENSMUST00000033994.15	2375	8	-23	1418	12	-1	multi-exon	FALSE	canonical	3	62	junction_3	606.753118606551	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAGAAATGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	34419857	34274092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.27	chr8	-	3967	10	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	705.316162361879	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAGAAATGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	34419895	34274092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34279419_34279524_34285109_34285179_34286897_34287032_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.28	chr8	-	1169	10	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	636.753571730156	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34419848	34274093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34276830_34276896_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.29	chr8	-	3133	1	NIC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	10016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34277226	34274093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274100_34277200
ES.32766.3	chr8	-	6291	3	NNC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	-2650	0	intron_retention	FALSE	non_canonical	0	0	junction_2	348	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34289892	34272670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34287921_34287956
ES.32766.30	chr8	-	885	7	NIC	ENSMUSG00000031586.18	novel	2466	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	560.965363359351	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34419867	34274093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34285109_34285179_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.31	chr8	-	4317	3	NNC	ENSMUSG00000031586.18	novel	643	6	NA	NA	722	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	214.5	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34286520	34274093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34279419_34279524_34285109
ES.32766.32	chr8	-	3857	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	559.605650771148	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTTAAGAAATGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	34419920	34274093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.33	chr8	-	2917	3	ISM	ENSMUSG00000031586.18	ENSMUST00000183336.8	549	5	9057	11	-565	0	intron_retention	FALSE	canonical	3	376	junction_1	31.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTATAATTTTAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	34287807	34274099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34274215_34279419_34279524_34285109
ES.32766.34	chr8	-	946	6	NIC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	569.152000787136	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGTATAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	34419877	34274100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34419503
ES.32766.35	chr8	-	6736	8	NIC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	376	junction_1	407.854265689126	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGTATAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	34419901	34274100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34279419_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.36	chr8	-	3862	2	ISM	ENSMUSG00000031586.18	ENSMUST00000183122.2	525	3	-1615	1	-1615	-1	intron_retention	FALSE	canonical	3	696	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGTATAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	34288857	34274100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34274215_34285109
ES.32766.37	chr8	-	3745	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	712.874989040856	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTGTATAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	34419836	34274100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34279419_34279524_34285109_34285179_34286901_34287032_34296744_34296879_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.38	chr8	-	3901	1	NIC	ENSMUSG00000031586.18	novel	549	5	NA	NA	-2501	8124	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGGGTGGGGACATG	NA	False	NA	NA	False	NA	NA	NA	34289743	34285842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34285800_34289700
ES.32766.39	chr8	-	1395	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-356	0	-298	0	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACAGCGTTTTTGGTT	NA	False	NA	-7	True	AATAAA	-36	NA	34420189	34293966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.4	chr8	-	2660	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	-112	-1	-90	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419981	34272670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.40	chr8	-	781	7	NNC	ENSMUSG00000031586.18	novel	1039	7	NA	NA	15482	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	624.984910928967	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTACAGCGTTTTTGGT	NA	False	NA	-8	True	AATAAA	-35	NA	34403822	34293967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34403749
ES.32766.41	chr8	-	3414	5	NIC	ENSMUSG00000031586.18	novel	1039	7	NA	NA	-2	-11	intron_retention	FALSE	canonical	3	16	junction_1	663.548604097695	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAAGTAGACTACAG	NA	False	NA	-18	True	AATAAA	-25	NA	34419836	34293977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34296879_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.42	chr8	-	3615	6	ISM	ENSMUSG00000031586.18	ENSMUST00000182987.8	1385	9	-51	20178	-4	-20	5prime_fragment	FALSE	canonical	3	1321	junction_2	112.206951656303	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGGTCTCAAGT	NA	False	NA	-27	True	AATAAA	-16	NA	34419895	34293986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.43	chr8	-	3141	7	NNC	ENSMUSG00000031586.18	novel	1039	7	NA	NA	4	-20	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	570.156825404691	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGGTCTCAAGT	NA	False	NA	-27	True	AATAAA	-16	NA	34419865	34293986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34296301_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.44	chr8	-	1264	8	NNC	ENSMUSG00000031586.18	novel	1039	7	NA	NA	-6	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	680.485750874225	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAAAAAATGGTCTCA	NA	False	NA	-30	True	AATAAA	-13	NA	34419850	34293989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34413725_34413957_34419503
ES.32766.45	chr8	-	177	1	Intergenic	novelGene_26742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAATTAGCAC	NA	False	NA	NA	False	NA	NA	NA	34311497	34311320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34311300_34311500
ES.32766.46	chr8	-	2534	1	Intergenic	novelGene_26743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAAAAGTCCT	NA	False	NA	NA	False	TTTAAA	-25	NA	34315911	34313377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34313400_34315900
ES.32766.47	chr8	-	2237	5	ISM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	-199	28988	-141	-26159	5prime_fragment	FALSE	canonical	3	1321	junction_1	116.10420965667	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGGGTTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	34420032	34322954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.48	chr8	-	1902	4	NIC	ENSMUSG00000031586.18	novel	1039	7	NA	NA	-1	-26269	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	741.561565586807	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGAGGTTTGAATTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	34419870	34323064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34324483_34354360_34354400_34356354_34356433_34419503
ES.32766.49	chr8	-	803	5	NNC	ENSMUSG00000031586.18	novel	317	4	NA	NA	-15	1864	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	669.14960023899	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATGCTTTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	34419906	34351170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34351391_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.5	chr8	-	2220	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-15663	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	593.016006845515	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34397455	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34397416
ES.32766.50	chr8	-	174	1	Intergenic	novelGene_26744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCAAGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	34383023	34382849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34382800_34383000
ES.32766.51	chr8	-	1869	1	Intergenic	novelGene_26748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAACAACCCAC	NA	False	NA	NA	False	NA	NA	NA	34410898	34409029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34409000_34410900
ES.32766.52	chr8	-	1785	1	FSM	ENSMUSG00000031586.18	ENSMUST00000231942.2	2534	1	-532	1281	-61	-1281	mono-exon	FALSE	NA	NA	NA	NA	NA	600	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCCCCTTTGCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34419952	34418167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34418200_34420000
ES.32766.6	chr8	-	4384	9	NIC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	10	junction_3	614.023004455045	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34419853	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34274215_34279419_34279524_34285109_34287032_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.7	chr8	-	5191	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	559.605650771148	705	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34419832	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34276896_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32766.8	chr8	-	1984	4	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	10203	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	459.417747444161	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34323496	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34274215_34285109_34285179_34296744_34296879_34323258
ES.32766.9	chr8	-	2209	10	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	581.329319558009	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34419834	34272671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_34273116_34273418_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ES.32767.1	chr8	+	177	1	Intergenic	novelGene_26751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTCTAAAAAATGACAA	NA	False	NA	NA	False	NA	NA	NA	34439000	34439177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34439000_34439200
ES.32768.1	chr8	-	173	1	Intergenic	novelGene_26752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	34443356	34443183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34443200_34443400
ES.32769.1	chr8	+	160	1	Intergenic	novelGene_26753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATAAATGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	34446408	34446568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34446400_34446600
ES.3277.1	chr10	-	222	1	Antisense	novelGene_ENSMUSG00000061780.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCCACGTGTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	79728693	79728471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79728500_79728700
ES.32770.1	chr8	-	154	1	Intergenic	novelGene_26754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTGTAAGTACGCTG	NA	False	NA	-1	True	AATAAA	-20	NA	34456444	34456290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34456300_34456400
ES.32771.1	chr8	-	173	1	Intergenic	novelGene_26755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGTGAGCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	34457250	34457077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34457100_34457200
ES.32772.1	chr8	-	177	1	Intergenic	novelGene_26756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	34460780	34460603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34460600_34460800
ES.32773.1	chr8	+	176	1	Intergenic	novelGene_26757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34467451	34467627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34467500_34467600
ES.32774.1	chr8	+	169	1	Intergenic	novelGene_26758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTCTTTTCTTTTCTTT	NA	False	NA	3	True	NA	NA	NA	34487248	34487417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34487200_34487400
ES.32775.1	chr8	+	5564	2	NNC	ENSMUSG00000054618.9	novel	513	2	NA	NA	-4195	-5023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAAGACCGTTTCTTGTG	5056	False	NA	NA	False	NA	NA	NA	34512220	34517973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34513484_34513672
ES.32776.1	chr8	-	192	1	Intergenic	novelGene_26759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTTTACAGAAAG	NA	False	NA	NA	False	NA	NA	NA	34514726	34514534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34514500_34514700
ES.32777.1	chr8	-	205	2	Intergenic	novelGene_26760	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCTGGAGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	34532037	34530034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34530064_34531861
ES.32777.2	chr8	-	176	1	Intergenic	novelGene_26761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34532036	34531860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34531900_34532000
ES.32778.1	chr8	-	176	1	Intergenic	novelGene_26762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTTAAACTCATCAC	NA	False	NA	NA	False	NA	NA	NA	34539321	34539145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34539100_34539300
ES.32779.1	chr8	-	1222	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	323	-296	4	293	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCATCCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	34575627	34557280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ES.32779.2	chr8	-	3375	5	NIC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	8	282	intron_retention	FALSE	canonical	3	293	junction_4	41.5774878991023	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCTGGAAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	34575609	34557291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34557997_34559664_34562127_34564342_34564449_34573495_34573561_34575572
ES.32779.3	chr8	-	3093	5	NIC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	293	junction_4	41.5774878991023	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34575609	34557573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34557997_34559664_34562127_34564342_34564449_34573495_34573561_34575572
ES.32779.4	chr8	-	2111	6	NIC	ENSMUSG00000031516.12	novel	1249	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	293	junction_5	37.8977571895752	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTGCCTCAATTTCC	NA	False	NA	-3	True	AATAAA	-28	NA	34575605	34557576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34557997_34559664_34559808_34560782_34562127_34564342_34564449_34573495_34573561_34575572
ES.32779.5	chr8	-	983	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	266	0	6	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTGCCTCAATTTCC	NA	False	NA	-3	True	AATAAA	-28	NA	34575684	34557576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ES.3278.1	chr10	-	3204	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-25	-229	0	2	multi-exon	TRUE	canonical	3	153	junction_9	18.1911617921159	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGTCACCGTGGTCC	1812	False	NA	1	True	AATAAA	-20	NA	79744757	79730539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.10	chr10	-	3004	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	0	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.4567404125675	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTCGTCTGCCTCAG	1825	False	NA	NA	False	CATAAA	-14	NA	79744744	79730720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735238_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.11	chr10	-	3198	14	NIC	ENSMUSG00000013833.16	novel	3197	15	NA	NA	1	35	intron_retention	FALSE	canonical	3	23	junction_13	46.6979466877514	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGTCCTGCTTGGGG	1815	False	NA	NA	False	CATAAA	-1	NA	79744754	79730733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79731245_79731460_79731545_79732181_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
ES.3278.13	chr10	-	3282	13	NIC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	-2	27	intron_retention	FALSE	canonical	3	153	junction_7	17.2938251664832	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAAAGCCCCTTGTCCT	1823	False	NA	NA	False	AAAAAG	-9	NA	79744746	79730741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79731245_79731460_79731545_79732181_79732786_79733398_79733533_79734069_79734281_79734730_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.15	chr10	-	3076	14	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	-6	-7	intron_retention	FALSE	canonical	0	0	junction_3	52.379475631736	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1806	False	NA	NA	False	NA	NA	NA	79744763	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732587_79732786_79733398_79733533_79734069_79734281_79734730_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.16	chr10	-	2959	15	NNC	ENSMUSG00000013833.16	novel	3197	15	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	50.5533159654443	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1814	False	NA	NA	False	NA	NA	NA	79744755	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732779_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.17	chr10	-	2915	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	50.4797393181923	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1823	False	NA	NA	False	NA	NA	NA	79744746	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734896_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.20	chr10	-	2832	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	50.4797393181923	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1813	False	NA	NA	False	NA	NA	NA	79744756	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734803_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.21	chr10	-	2962	15	NNC	ENSMUSG00000013833.16	novel	3197	15	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.5504900155906	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1815	False	NA	NA	False	NA	NA	NA	79744754	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743484_79744647
ES.3278.22	chr10	-	2957	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.3015397175791	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	1816	False	NA	NA	False	NA	NA	NA	79744753	79730775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731467_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.23	chr10	-	2795	5	NIC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	1	668	intron_retention	FALSE	canonical	3	157	junction_4	19.8053023203384	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTGTGTTTGCTGTG	1826	False	NA	NA	False	ATTAAA	-17	NA	79744743	79737003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.24	chr10	-	1674	6	ISM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	9	7115	-2	15	5prime_fragment	FALSE	canonical	3	23	junction_5	69.1751400432265	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCTCTCTCCCCACTG	1823	False	NA	NA	False	NA	NA	NA	79744746	79737656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
ES.3278.3	chr10	-	3234	16	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	64.0839726886181	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTGGCTGTCACCGTG	1838	False	NA	-3	True	AATAAA	-16	NA	79744731	79730543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735447_79735508_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.4	chr10	-	3200	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	207	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.5504900155906	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTGGCTGTCACCGTG	2124	False	NA	-3	True	AATAAA	-16	NA	79744445	79730543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744339
ES.3278.7	chr10	-	3051	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	-35	-66	-10	66	multi-exon	FALSE	canonical	3	153	junction_9	18.1911617921159	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTTGTCCTGCTTGG	1802	False	NA	NA	False	CATAAA	-32	NA	79744767	79730702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.8	chr10	-	3084	16	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	-1	50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	64.0839726886181	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCGTCTGCCTCAGTT	1813	False	NA	NA	False	CATAAA	-16	NA	79744756	79730718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735447_79735508_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ES.3278.9	chr10	-	3030	15	NNC	ENSMUSG00000013833.16	novel	2950	15	NA	NA	201	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.5504900155906	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCGTCTGCCTCAGT	2118	False	NA	NA	False	CATAAA	-15	NA	79744451	79730719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744339
ES.32780.1	chr8	-	768	1	FSM	ENSMUSG00000063412.5	ENSMUST00000080152.5	736	1	11	-43	11	43	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTCTATAGTCTCCGG	NA	False	NA	NA	False	NA	NA	NA	34578880	34578112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34578100_34578900
ES.32781.1	chr8	+	3756	4	NNC	ENSMUSG00000071113.5	novel	1836	3	NA	NA	2091	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.18544972870135	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTCTGTGGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	34584274	34592332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34585592_34585956_34586766_34587223_34587430_34590908
ES.32782.1	chr8	-	158	1	Intergenic	novelGene_26763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTTAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	34589553	34589395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34589400_34589600
ES.32783.1	chr8	+	7285	1	Antisense	novelGene_ENSMUSG00000031513.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAACTACAAAGTGTCAA	NA	False	NA	NA	False	NA	NA	NA	34606146	34613431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_34606100_34613400
ES.32784.1	chr8	-	2888	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	-6	-3	-6	3	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTGGGTGTTTTCAT	8780	False	NA	-1	True	AATAAA	-19	NA	34614193	34602722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.2	chr8	-	2155	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	239	485	239	-485	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGGTTTTTATTTTGTTT	9025	False	NA	NA	False	ACTAAA	-12	NA	34613948	34603210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.3	chr8	-	1953	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	317	609	317	-609	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAACTGTCTTTTGTTGT	9103	False	NA	NA	False	TATAAA	-40	NA	34613870	34603334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.4	chr8	-	1096	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	295	1488	295	-1488	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTTAGAAGAATTTA	9081	False	NA	NA	False	TATAAA	-16	NA	34613892	34604213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.5	chr8	-	923	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	239	1717	239	-1717	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCATTCAGTCAGGA	9025	False	NA	3	True	ATTAAA	-20	NA	34613948	34604442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.6	chr8	-	3414	2	NIC	ENSMUSG00000031513.9	novel	2879	4	NA	NA	239	-1961	intron_retention	FALSE	canonical	3	354	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGGTTTCCCACTT	9025	False	NA	-3	True	ATTAAA	-22	NA	34613948	34604686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34607991_34613838
ES.32784.7	chr8	-	675	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	239	1965	239	-1965	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTGGCTGGTTTCCC	9025	False	NA	-7	True	ATTAAA	-18	NA	34613948	34604690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ES.32784.8	chr8	-	2394	3	NIC	ENSMUSG00000031513.9	novel	2879	4	NA	NA	239	-1966	intron_retention	FALSE	canonical	3	354	junction_2	12	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCTTGGCTGGTTTCC	9025	False	NA	-8	True	ATTAAA	-17	NA	34613948	34604691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34604993_34606007_34607991_34613838
ES.32784.9	chr8	-	796	1	NIC	ENSMUSG00000031513.9	novel	2879	4	NA	NA	295	-10371	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGATGTTA	9081	False	NA	NA	False	NA	NA	NA	34613892	34613096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_34613100_34613900
ES.32785.1	chr8	+	1884	6	FSM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	13	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTGTTTCGTGTGTGGT	NA	False	NA	33	True	AATAAA	-40	NA	34621729	34637999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ES.32785.2	chr8	+	3940	4	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	3	0	3	0	intron_retention	FALSE	canonical	3	207	junction_1	29.0172362570938	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTGTTCTTTGTACT	NA	False	NA	9	True	AATAAA	-16	NA	34621732	34637975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872
ES.32785.3	chr8	+	3335	5	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	7	2	7	1	intron_retention	FALSE	canonical	3	207	junction_1	27.362154520432	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTCTTGTTCTTTGTA	NA	False	NA	7	True	AATAAA	-14	NA	34621736	34637973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610
ES.32785.4	chr8	+	1525	6	FSM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	36	299	36	-296	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTAAGCCCAGTGCC	NA	False	NA	NA	False	ATTAAA	-24	NA	34621765	34637676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ES.32785.5	chr8	+	1615	5	NIC	ENSMUSG00000031532.8	novel	1897	6	NA	NA	-41	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	120.381425062175	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTCTTGTTCTTTGTA	NA	False	NA	7	True	AATAAA	-14	NA	34621793	34637973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_34621991_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ES.32785.6	chr8	+	678	1	Intergenic	novelGene_26764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGATGAGAGCCAT	2518	False	NA	NA	False	NA	NA	NA	34626057	34626735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_34626100_34626700
ES.32786.1	chr8	-	185	1	Intergenic	novelGene_26765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGAATAGATTCC	NA	False	NA	NA	False	NA	NA	NA	34663214	34663029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_34663000_34663200
ES.32787.1	chr8	+	498	4	NNC	ENSMUSG00000100605.2	novel	418	4	NA	NA	-56	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	9.41629792788369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCACTTACTCTTTCT	NA	False	NA	NA	False	ATTAAA	-38	NA	34683956	34693296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_34684111_34687993_34688119_34691015_34691123_34693184
ES.32787.2	chr8	+	440	4	FSM	ENSMUSG00000100605.2	ENSMUST00000188318.2	418	4	-18	-4	-18	4	multi-exon	FALSE	canonical	3	16	junction_3	5.71547606649408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTACTCTTTCTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-45	NA	34683994	34693303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_34684111_34688020_34688119_34691015_34691123_34693184
ES.32788.1	chr8	-	171	1	Intergenic	novelGene_26766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTTAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	35025241	35025070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_35025100_35025200
ES.32789.1	chr8	+	4801	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	-2	-2059	-2	2059	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTTTGTGGACTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	35274448	35289107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ES.32789.2	chr8	+	2734	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	-2	8	-2	-8	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTGACTTGGGCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	35274448	35287040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ES.32789.3	chr8	+	1864	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	-2	878	-2	-878	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGGTTTCTGTGTCA	NA	False	NA	NA	False	ACTAAA	-42	NA	35274448	35286170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ES.32789.4	chr8	+	5323	3	NIC	ENSMUSG00000031530.7	novel	2740	4	NA	NA	6	2058	intron_retention	FALSE	canonical	3	23	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGCTTTTGTGGACTCT	NA	False	NA	NA	False	AATAAA	-15	NA	35274456	35289106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_35275328_35283600_35284498_35285551
ES.32789.5	chr8	+	3035	4	NNC	ENSMUSG00000031530.7	novel	2740	4	NA	NA	7420	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3431330181157	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGGCCTCCTAAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	35281870	35287047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_35283044_35283600_35283747_35284277_35284498_35285551
ES.3279.1	chr10	-	5130	6	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	89	0	2	0	intron_retention	FALSE	canonical	3	161	junction_1	8.30421579681068	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9771	False	NA	-8	True	AATAAA	-15	NA	79752751	79745885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ES.3279.10	chr10	-	1567	6	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_4	67.789084667076	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9768	False	NA	-10	True	AATAAA	-13	NA	79752754	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79749390_79749546_79752656
ES.3279.11	chr10	-	5374	6	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	147	junction_5	13.3026313186527	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9770	False	NA	-10	True	AATAAA	-13	NA	79752752	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79749181_79749390
ES.3279.12	chr10	-	1999	7	NNC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_2	60.1010722773636	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9770	False	NA	-10	True	AATAAA	-13	NA	79752752	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79746974_79747775_79747856_79747908_79747995_79748229_79748604_79749058_79749181_79749390_79749546_79752656
ES.3279.13	chr10	-	3053	7	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	1954	2	1867	-2	3prime_fragment	FALSE	canonical	3	147	junction_6	12.3614544271924	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	8315	False	NA	-10	True	AATAAA	-13	NA	79750886	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390
ES.3279.2	chr10	-	1833	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	64	1	-14	-1	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	9746	False	NA	-9	True	AATAAA	-14	NA	79752776	79745886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ES.3279.4	chr10	-	1902	7	NNC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_3	72.6760315066498	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	9770	False	NA	-9	True	AATAAA	-14	NA	79752752	79745886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79746974_79747775_79748013_79748229_79748314_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ES.3279.5	chr10	-	1890	7	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	145	junction_6	11.977989072554	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	9766	False	NA	-9	True	AATAAA	-14	NA	79752756	79745886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79746974_79747775_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ES.3279.6	chr10	-	1791	8	NIC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	6	junction_7	58.1177551991451	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	9758	False	NA	-9	True	AATAAA	-14	NA	79752764	79745886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749516_79752656
ES.3279.7	chr10	-	1890	8	NNC	ENSMUSG00000035781.15	novel	1898	8	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	2	junction_1	59.1383711204114	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9766	False	NA	-10	True	AATAAA	-13	NA	79752756	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79747052_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ES.3279.9	chr10	-	5328	4	NNC	ENSMUSG00000035781.15	novel	435	4	NA	NA	699	-2	intron_retention	FALSE	canonical	3	8	junction_1	78.0185163207356	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCCTGTCCCCGTGTTTG	9441	False	NA	-10	True	AATAAA	-13	NA	79752054	79745887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79748013_79748229_79748316_79748482_79748604_79749058
ES.32790.1	chr8	+	4637	1	Intergenic	novelGene_26767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAGAAAAAGGACA	NA	False	NA	NA	False	NA	NA	NA	35400983	35405620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35401000_35405600
ES.32791.1	chr8	-	2091	1	Genic_Genomic	ENSMUSG00000031529.6	novel	NA	NA	NA	NA	11225	1254	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	35294450	35292359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_35292400_35294400
ES.32791.11	chr8	-	9200	27	NNC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_15	32.1244805175229	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTGTAGCATTCAGC	NA	False	NA	-17	True	AATAAA	-15	NA	35432857	35293613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324712_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.15	chr8	-	764	2	NNC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	9116	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTGTAGCATTCAG	NA	False	NA	-18	True	AATAAA	-14	NA	35296559	35293614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35294164_35296344
ES.32791.17	chr8	-	9046	25	NIC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_22	33.4099120355355	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTGTAGCATTCAG	NA	False	NA	-18	True	AATAAA	-14	NA	35432841	35293614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35385532_35385629_35407849_35408075_35432167
ES.32791.20	chr8	-	9388	21	NIC	ENSMUSG00000031529.6	novel	3417	23	NA	NA	14886	-1	intron_retention	FALSE	canonical	3	108	junction_18	17.8160040413107	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTGTAGCATTCAG	NA	False	NA	-18	True	AATAAA	-14	NA	35342419	35293614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367
ES.32791.21	chr8	-	8849	2	ISM	ENSMUSG00000031529.6	ENSMUST00000209904.2	3417	23	52126	-5110	496	-1	3prime_fragment	FALSE	canonical	3	189	junction_1	0	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTGTAGCATTCAG	NA	False	NA	-18	True	AATAAA	-14	NA	35305179	35293614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_35298876_35301591
ES.32791.23	chr8	-	9145	27	NNC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	41.6962281721858	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGTGTGTAGCATTCA	NA	False	NA	-19	True	AATAAA	-13	NA	35432848	35293615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340356_35340756_35340824_35342374_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.27	chr8	-	5465	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-4	3702	-4	980	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTCTGGTTCTTGAA	NA	False	NA	NA	False	ATTAAA	-14	NA	35432848	35297315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.28	chr8	-	4546	27	NNC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	19	92	intron_retention	FALSE	canonical	0	0	junction_4	41.3774657821889	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTCCTTTTATAAAC	NA	False	NA	NA	False	CATAAA	-16	NA	35432825	35298203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306142_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324686_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.29	chr8	-	4574	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-1	4590	-1	92	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTCCTTTTATAAAC	NA	False	NA	NA	False	CATAAA	-16	NA	35432845	35298203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.3	chr8	-	3602	13	NNC	ENSMUSG00000031529.6	novel	3417	23	NA	NA	-8810	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.3066178904336	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTAAGTGTCTCCTGCTT	NA	False	NA	0	True	AATAAA	-32	NA	35318983	35293596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35295520_35298776_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767
ES.32791.30	chr8	-	4527	2	NNC	ENSMUSG00000031529.6	novel	3417	23	NA	NA	-5305	-5983	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTGGGCAATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	35315478	35310891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35315085_35315144
ES.32791.31	chr8	-	4499	2	NNC	ENSMUSG00000031529.6	novel	3417	23	NA	NA	-5317	-6024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	TATAAA	-19	NA	35315490	35310932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35315098_35315156
ES.32791.32	chr8	-	3438	12	NIC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	-14	-19032	intron_retention	FALSE	canonical	3	108	junction_5	17.9010134068364	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTCCCCTTCCTCTC	NA	False	NA	-2	True	NA	NA	NA	35432858	35323940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.33	chr8	-	2682	13	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-10	30327	-10	-19032	5prime_fragment	FALSE	canonical	3	108	junction_5	17.2841851284796	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTCCCCTTCCTCTC	NA	False	NA	-2	True	NA	NA	NA	35432854	35323940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.34	chr8	-	4254	1	NIC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	-18021	-19032	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCCTCCCCTTCCTCTC	NA	False	NA	-2	True	NA	NA	NA	35328194	35323940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35323900_35328200
ES.32791.35	chr8	-	2275	11	ISM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	9	40290	9	-28995	5prime_fragment	FALSE	canonical	3	108	junction_3	17.0002941151028	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35432835	35333903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.36	chr8	-	732	1	NIC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	20635	-31030	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAAAACCAAACTGA	NA	False	NA	NA	False	AAAACA	-6	NA	35336670	35335938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35335900_35336700
ES.32791.4	chr8	-	9209	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	-44	-2	-44	2	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTAGCATTCAGCTT	NA	False	NA	-15	True	AATAAA	-17	NA	35432888	35293611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32791.9	chr8	-	10218	26	NIC	ENSMUSG00000031529.6	novel	9163	27	NA	NA	9	0	intron_retention	FALSE	canonical	3	108	junction_18	17.3262344437561	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTGTAGCATTCAGC	NA	False	NA	-17	True	AATAAA	-15	NA	35432835	35293613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ES.32792.1	chr8	+	4539	1	Genic_Genomic	ENSMUSG00000054247.7	novel	NA	NA	NA	NA	-64	2650	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCCAGAGTCAAACA	NA	False	NA	NA	False	NA	NA	NA	35432992	35437531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_35433000_35437500
ES.32792.2	chr8	+	2263	3	NNC	ENSMUSG00000054247.7	novel	834	2	NA	NA	495	7834	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAAATTGTCACAAGCC	NA	False	NA	NA	False	TATAAA	-14	NA	35434081	35442715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_35434218_35434668_35434900_35440819
ES.32792.3	chr8	+	5150	3	NNC	ENSMUSG00000054247.7	novel	834	2	NA	NA	551	10781	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCATTCAGTATTGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	35434137	35445662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_35434214_35434668_35434900_35440819
ES.32792.4	chr8	+	183	1	Intergenic	novelGene_26768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTATAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	35436407	35436590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35436400_35436600
ES.32793.1	chr8	+	183	1	Intergenic	novelGene_26769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAAGAAAAC	9678	False	NA	NA	False	NA	NA	NA	35630474	35630657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35630500_35630700
ES.32794.1	chr8	+	152	1	Intergenic	novelGene_26770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTAAATT	NA	False	NA	NA	False	NA	NA	NA	35688257	35688409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35688300_35688400
ES.32795.1	chr8	+	295	1	Intergenic	novelGene_26771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGCTAATATT	NA	False	NA	NA	False	NA	NA	NA	35705023	35705318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35705000_35705300
ES.32796.1	chr8	+	4281	2	FSM	ENSMUSG00000046794.10	ENSMUST00000070481.8	4221	2	-54	-6	-52	6	multi-exon	FALSE	canonical	2	5	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCCTTCTATTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	35842840	35855299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35842960_35851137
ES.32796.2	chr8	+	3714	2	FSM	ENSMUSG00000046794.10	ENSMUST00000210337.2	4349	2	-44	679	-44	-679	multi-exon	FALSE	canonical	3	17	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTTTCTTGTAAGAAG	NA	False	NA	NA	False	AATAAA	-16	NA	35842848	35854604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35843096_35851137
ES.32796.3	chr8	+	4372	2	FSM	ENSMUSG00000046794.10	ENSMUST00000210337.2	4349	2	-13	-10	-13	0	multi-exon	FALSE	canonical	3	17	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35842879	35855293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35843096_35851137
ES.32796.4	chr8	+	3542	2	FSM	ENSMUSG00000046794.10	ENSMUST00000070481.8	4221	2	-13	692	-11	-682	multi-exon	FALSE	canonical	2	5	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATGTTTCTTGTAAG	NA	False	NA	NA	False	AATAAA	-13	NA	35842881	35854601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_35842960_35851137
ES.32796.5	chr8	+	4329	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	823	-5	-79	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35843734	35855293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_35843908_35851137
ES.32796.6	chr8	+	3627	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	833	687	-69	-682	3prime_fragment	FALSE	canonical	3	26	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATGTTTCTTGTAAG	NA	False	NA	NA	False	AATAAA	-13	NA	35843744	35854601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_35843908_35851137
ES.32796.7	chr8	+	2992	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	871	1284	-31	-1279	3prime_fragment	FALSE	canonical	3	26	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATATGTCCCTCCTAAA	NA	False	NA	NA	False	TATAAA	-15	NA	35843782	35854004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_35843908_35851137
ES.32796.8	chr8	+	2650	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	904	1593	2	-1588	3prime_fragment	FALSE	canonical	3	26	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGGGCCAGGAGTTTG	NA	False	NA	NA	False	NA	NA	NA	35843815	35853695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_35843908_35851137
ES.32797.1	chr8	-	3829	1	Intergenic	novelGene_26772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	35850739	35846910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_35846900_35850700
ES.32798.1	chr8	+	4485	1	Intergenic	novelGene_26773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTTATTTTTAGTTG	NA	False	NA	NA	False	AATAAA	-1	NA	35860014	35864499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35860000_35864500
ES.32799.1	chr8	-	178	1	Intergenic	novelGene_26774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	35863729	35863551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_35863600_35863700
ES.328.1	chr1	+	3195	1	Antisense	novelGene_ENSMUSG00000026082.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTACAATGAAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	38096502	38099697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_38096500_38099700
ES.328.2	chr1	+	1847	2	Antisense	novelGene_ENSMUSG00000026082.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTACAATGAAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	38096505	38099697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_38096860_38098204
ES.3280.1	chr10	+	175	1	Intergenic	novelGene_2554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATAATACATT	5223	False	NA	NA	False	NA	NA	NA	79760337	79760512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79760300_79760500
ES.32800.1	chr8	+	180	1	Intergenic	novelGene_26775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAGAAAAAGCCAAAGC	NA	False	NA	NA	False	NA	NA	NA	35929804	35929984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35929800_35930000
ES.32801.1	chr8	+	1866	1	Intergenic	novelGene_26776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCACTTTCCCTGCC	NA	False	NA	NA	False	NA	NA	NA	35938309	35940175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_35938300_35940200
ES.32802.1	chr8	-	5079	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCCTGCGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	35962687	35932406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.11	chr8	-	4282	8	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	25	-1085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.197489635866	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTCTGGAAATTTTTCT	NA	False	NA	-11	True	ATTAAA	-9	NA	35962662	35933491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981_35943141_35943612_35943723_35945713_35945952_35949669_35949881_35958354_35958534_35962425
ES.32802.13	chr8	-	3868	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	-12	1223	-12	-1223	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCATCTCCTTGTT	NA	False	NA	-3	True	NA	NA	NA	35962699	35933629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.14	chr8	-	3201	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	1877	1	-1877	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTCGGACATAGGAGGAA	NA	False	NA	98	True	NA	NA	NA	35962686	35934283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.15	chr8	-	3100	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	0	1979	0	-1979	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTGGCATTGCCTGTTG	NA	False	NA	-4	True	ATTAAA	-27	NA	35962687	35934385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.16	chr8	-	2372	3	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	25	-1985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATCTCATTGGCATTGC	NA	False	NA	-10	True	ATTAAA	-21	NA	35962662	35934391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936443_35958449_35958534_35962425
ES.32802.18	chr8	-	3069	7	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	23	-1985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	148.579664377958	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATCTCATTGGCATTGC	NA	False	NA	-10	True	ATTAAA	-21	NA	35962664	35934391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35943612_35943717_35945709_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.19	chr8	-	2989	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	-12	2102	-12	-2102	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAAAGTAATTCCTGCT	NA	False	NA	4	True	AGTAAA	-37	NA	35962699	35934508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.2	chr8	-	4743	6	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	-1266	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	188.680258638788	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTGCCTGCGTTCTG	NA	False	NA	NA	False	NA	NA	NA	35949828	35932408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981_35943141_35943612_35943723_35945713_35945798_35949669
ES.32802.20	chr8	-	3090	7	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	21	-2122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	148.174071805952	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAGTGACCAGTATAT	NA	False	NA	-16	True	AGTAAA	-17	NA	35962666	35934528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945952_35949669_35949881_35958354_35958534_35962425
ES.32802.21	chr8	-	1867	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	-7	3219	-7	-3219	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCAAGTTGATGTAGAC	NA	False	NA	NA	False	NA	NA	NA	35962694	35935625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.22	chr8	-	1591	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	3487	1	-3487	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTAGTGTTTGCCCATT	NA	False	NA	0	True	ATTAAA	-30	NA	35962686	35935893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.24	chr8	-	760	3	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	5555	-3499	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	201.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGATTGAAAGGTAG	NA	False	NA	-12	True	ATTAAA	-18	NA	35943007	35935905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981
ES.32802.25	chr8	-	5417	6	NIC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	35	-3499	intron_retention	FALSE	canonical	3	346	junction_2	30.7349963396777	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGATTGAAAGGTAG	NA	False	NA	-12	True	ATTAAA	-18	NA	35962652	35935905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35949881_35958354_35958534_35962425
ES.32802.3	chr8	-	4417	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	1	661	1	-661	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAAGAACTTTTAGTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	35962686	35933067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.4	chr8	-	5012	7	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	32	-666	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	146.97240859729	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGGTGAAAGAACTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	35962655	35933072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.5	chr8	-	4005	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	5	1069	5	-1069	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCTCTCCACTTCTCC	NA	False	NA	5	True	ATTAAA	-25	NA	35962682	35933475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.7	chr8	-	3810	7	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	185	-1078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	147.844231090248	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAATTTTTCTTTCTCTC	NA	False	NA	-4	True	ATTAAA	-16	NA	35962502	35933484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958528_35962425
ES.32802.8	chr8	-	4142	8	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	14	-1082	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	178.767206964013	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGAAATTTTTCTTTC	NA	False	NA	-8	True	ATTAAA	-12	NA	35962673	35933488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981_35943141_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32802.9	chr8	-	4603	7	NNC	ENSMUSG00000031527.8	novel	5079	7	NA	NA	23	-1084	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	146.97240859729	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTGGAAATTTTTCTT	NA	False	NA	-10	True	ATTAAA	-10	NA	35962664	35933490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_35936525_35941550_35941666_35942981_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ES.32803.1	chr8	+	6441	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	-33	0	-33	0	multi-exon	FALSE	canonical	1	3	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGTAGCTCCAGCATT	NA	False	NA	NA	False	NA	NA	NA	36054918	36146603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_36058513_36131821_36131949_36143883
ES.32803.2	chr8	+	6505	4	NIC	ENSMUSG00000070056.7	novel	6408	3	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	1.24721912892465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGTGGTAGCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	36054961	36146600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_36058513_36131821_36131949_36138875_36138986_36143883
ES.32803.3	chr8	+	4183	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	21	2204	21	225	multi-exon	FALSE	canonical	1	3	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGCTTCTAGCATGAGT	NA	False	NA	NA	False	AATACA	-17	NA	36054972	36144399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_36058513_36131821_36131949_36143883
ES.32803.4	chr8	+	3845	2	ISM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	45	14453	45	-12024	5prime_fragment	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCACACCAGTTTACT	NA	False	NA	NA	False	ATTAAA	-21	NA	36054996	36132150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_36058513_36131821
ES.32803.5	chr8	+	4267	4	NIC	ENSMUSG00000070056.7	novel	6408	3	NA	NA	45	223	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	1.24721912892465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGACGCTTCTAGCATGA	NA	False	NA	NA	False	AATACA	-15	NA	36054996	36144397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_36058513_36131821_36131949_36138875_36138986_36143883
ES.32804.1	chr8	-	176	1	Intergenic	novelGene_26777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGTGTAGTCATG	NA	False	NA	NA	False	NA	NA	NA	36126203	36126027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_36126000_36126200
ES.32805.1	chr8	+	3913	6	NNC	ENSMUSG00000109714.2	novel	961	5	NA	NA	-499	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1.78885438199983	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGCTCTCTGACCACC	2219	False	NA	NA	False	AATGAA	-17	NA	36190829	36201931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_36190871_36191452_36191623_36192585_36192672_36198015_36198167_36198250_36199144_36199359
ES.32805.2	chr8	+	981	5	NNC	ENSMUSG00000109714.2	novel	961	5	NA	NA	-499	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.4790199457749	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTGCTCTCTGACCAC	2219	False	NA	NA	False	AATGAA	-16	NA	36190829	36201930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_36190871_36191452_36191623_36192585_36192672_36198015_36198167_36201397
ES.32805.3	chr8	+	4777	2	Genic_Genomic	ENSMUSG00000109714.2	novel	961	5	NA	NA	6075	1743	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTTTGGAGTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	36198672	36203665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_36199144_36199359
ES.32806.1	chr8	+	174	1	ISM	ENSMUSG00000109714.2	ENSMUST00000210105.2	2329	3	31885	15	31885	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACGT	NA	False	NA	NA	False	NA	NA	NA	36224482	36224656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_36224500_36224700
ES.32807.1	chr8	+	1118	3	Intergenic	novelGene_26778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGATACCATTAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	36377877	36395157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_36378015_36383195_36383396_36394376
ES.32808.1	chr8	+	5123	6	FSM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	-341	-2	-341	2	multi-exon	FALSE	canonical	3	27	junction_2	3.13687742827162	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTTTTATTGCGTCG	NA	False	NA	12	True	AATAAA	-18	NA	36561640	36614943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_36562143_36566723_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
ES.32808.2	chr8	+	3919	7	NNC	ENSMUSG00000050271.13	novel	4780	6	NA	NA	-212	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.7579760163048	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTAATTTGTTTTTAT	NA	False	NA	5	True	AATAAA	-11	NA	36561769	36614936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_36562143_36566723_36567142_36569709_36570015_36571082_36571506_36596157_36596316_36606505_36607267_36613455
ES.32808.3	chr8	+	2330	1	Genic_Genomic	ENSMUSG00000050271.13	novel	NA	NA	NA	NA	-170	-5757	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36561811	36564141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_36561800_36564100
ES.32808.4	chr8	+	4931	6	NNC	ENSMUSG00000050271.13	novel	4780	6	NA	NA	-133	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	10.2878569196893	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTTGTTTTTATTGCG	NA	False	NA	9	True	AATAAA	-15	NA	36561848	36614940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_36562143_36566704_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
ES.32808.5	chr8	+	1742	1	Intergenic	novelGene_26779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGGAAAAAAAGCTATCC	NA	False	NA	NA	False	TATAAA	-40	NA	36579705	36581447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_36579700_36581400
ES.32809.1	chr8	-	1964	3	Antisense	novelGene_ENSMUSG00000050271.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCTGACTCTGACTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	36614247	36599838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_36601440_36602729_36602883_36614037
ES.32809.2	chr8	-	3509	1	Intergenic	novelGene_26780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTGAATACTTGAATGAA	2911	False	NA	NA	False	NA	NA	NA	36611031	36607522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_36607500_36611000
ES.3281.1	chr10	+	2742	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	-46	2665	-46	-290	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACTGCGTGTTCACAAT	1801	False	NA	NA	False	NA	NA	NA	79762830	79788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.3281.2	chr10	+	5352	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	6	3	6	-3	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTGGCTTTTTTGATT	1853	False	NA	6	True	ATTAAA	-23	NA	79762882	79790849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.3281.3	chr10	+	2993	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	13	2355	13	20	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGCCATGGTCGGTCCC	1860	False	NA	NA	False	AAAAAG	-13	NA	79762889	79788497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.3281.4	chr10	+	2508	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	27	2826	27	-451	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACTTGAATCTCTC	1874	False	NA	NA	False	AATAAA	-13	NA	79762903	79788026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.3281.5	chr10	+	2830	9	FSM	ENSMUSG00000019564.13	ENSMUST00000105376.2	4892	9	-36	2098	-36	-38	multi-exon	FALSE	canonical	3	17	junction_1	10.5089247784919	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTTGTGTTCATTCA	2109	False	NA	NA	False	NA	NA	NA	79763138	79788439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763235_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.3281.6	chr10	+	2516	9	FSM	ENSMUSG00000019564.13	ENSMUST00000105376.2	4892	9	26	2350	26	-290	multi-exon	FALSE	canonical	3	17	junction_1	10.5089247784919	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACTGCGTGTTCACAAT	2171	False	NA	NA	False	NA	NA	NA	79763200	79788187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79763235_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ES.32810.1	chr8	-	208	1	Intergenic	novelGene_26781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAACCCACCT	NA	False	NA	NA	False	NA	NA	NA	36617143	36616935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_36616900_36617100
ES.32811.1	chr8	+	2191	4	NNC	ENSMUSG00000109704.2	novel	1488	4	NA	NA	-83	639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATCAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	36623080	36629381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_36623247_36623480_36623563_36626900_36627001_36627538
ES.32811.2	chr8	+	654	4	NIC	ENSMUSG00000109704.2	novel	1488	4	NA	NA	-54	-434	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTTCGCCATCTA	NA	False	NA	NA	False	NA	NA	NA	36623109	36627754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_36623366_36623480_36623563_36626900_36627001_36627538
ES.32812.1	chr8	-	3010	1	Intergenic	novelGene_26782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCGGCATGAGCAATG	NA	False	NA	NA	False	NA	NA	NA	36681371	36678361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_36678400_36681400
ES.32813.1	chr8	+	2333	1	Antisense	novelGene_ENSMUSG00000039633.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCTCTCTCCTGTCTAT	NA	False	NA	NA	False	NA	NA	NA	36691252	36693585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_36691300_36693600
ES.32814.1	chr8	-	3541	8	ISM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	19214	-1174	19214	1174	3prime_fragment	FALSE	canonical	3	97	junction_3	10.0974840268985	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAATATATGTAAATGA	NA	False	NA	NA	False	ATTAAA	-25	NA	36697456	36682043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436
ES.32814.10	chr8	-	3228	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	179	523	179	-523	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGTCTCCAGGAACAAC	NA	False	NA	NA	False	AATACA	-40	NA	36716491	36683740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32814.2	chr8	-	4083	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	179	-332	179	332	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATGTGGTATCTTGAGGC	NA	False	NA	NA	False	TATAAA	-4	NA	36716491	36682885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32814.3	chr8	-	3892	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	110	-72	110	72	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACATGTGTTTATTTGT	NA	False	NA	70	True	AATACA	-22	NA	36716560	36683145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32814.4	chr8	-	3602	11	NIC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	33.7971892322424	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCCCCCCCTTTAAAT	NA	False	NA	-2	True	AATAAA	-15	NA	36716492	36683217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36701053_36701177_36703142_36703262_36715720
ES.32814.5	chr8	-	3592	11	NNC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	179	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.7794713818323	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCCCCCCCCCTTTAAA	NA	False	NA	-3	True	AATAAA	-14	NA	36716491	36683218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_36684756_36686979_36687133_36689769_36689925_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36701053_36701177_36703142_36703262_36715720
ES.32814.6	chr8	-	3361	13	NNC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	389	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.1548345728878	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCCCCCCCCCTTTAA	NA	False	NA	-4	True	AATAAA	-13	NA	36716281	36683219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_36684050_36684227_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32814.8	chr8	-	3833	11	NIC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	199	-3	intron_retention	FALSE	canonical	3	80	junction_7	13.7535449975634	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTCCCCCCCCCTTTA	NA	False	NA	-5	True	AATAAA	-12	NA	36716471	36683220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32814.9	chr8	-	3702	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	181	47	181	-47	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGCTTTTGCTTATTT	NA	False	NA	-49	True	NA	NA	NA	36716489	36683264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ES.32815.1	chr8	+	2303	6	NIC	ENSMUSG00000039620.18	novel	2573	7	NA	NA	205	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.6	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTAATTACTTAGACCT	NA	False	NA	NA	False	AATAAA	-13	NA	36924932	36980159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_36925046_36925311_36925538_36956197_36956400_36965480_36965636_36972705_36972880_36978726
ES.32815.2	chr8	+	3540	2	Genic_Genomic	ENSMUSG00000039620.18	novel	2573	7	NA	NA	3946	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTAGACCTCTGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	36976588	36980165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_36976755_36976791
ES.32816.1	chr8	-	1132	2	Intergenic	novelGene_26783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	37012868	37008644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_37009658_37012749
ES.32817.1	chr8	+	8349	1	Intergenic	novelGene_26785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	37068249	37076598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_37068200_37076600
ES.32818.1	chr8	+	2131	1	Intergenic	novelGene_26786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37077814	37079945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_37077800_37079900
ES.32819.1	chr8	-	6165	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	5	-11	5	11	multi-exon	TRUE	canonical	3	9	junction_4	11.0077971289962	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTTGCTTCTCTTAT	NA	False	NA	-2	True	NA	NA	NA	37081092	37034893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.10	chr8	-	3286	7	NNC	ENSMUSG00000031523.17	novel	616	3	NA	NA	-31	-7858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9294637843725	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37081059	37047156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_37048274_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.11	chr8	-	5978	2	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	27297	12255	-9377	-7861	internal_fragment	FALSE	canonical	3	34	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37053800	37047159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_37050032_37050694
ES.32819.12	chr8	-	2922	2	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	29425	13183	-7249	-8789	internal_fragment	FALSE	canonical	3	34	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACAAGTCCACCCTCCCA	NA	False	NA	NA	False	NA	NA	NA	37051672	37048087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_37050032_37050694
ES.32819.13	chr8	-	2275	7	NNC	ENSMUSG00000031523.17	novel	616	3	NA	NA	35	-8803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9294637843725	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCTACA	NA	False	NA	NA	False	NA	NA	NA	37080993	37048101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_37048274_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.14	chr8	-	606	3	FSM	ENSMUSG00000031523.17	ENSMUST00000145245.2	616	3	10	0	10	0	multi-exon	FALSE	canonical	3	26	junction_1	11.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAAAAAAAAAATGATT	NA	False	NA	NA	False	NA	NA	NA	37081018	37060384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_37060613_37066522_37066595_37080712
ES.32819.15	chr8	-	2861	1	Intergenic	novelGene_26784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGCGGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	37065020	37062159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_37062200_37065000
ES.32819.16	chr8	-	3209	1	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-29	-17464	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCTAAAGGGCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	37081057	37077848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_37077800_37081100
ES.32819.2	chr8	-	5507	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	28	624	28	-624	multi-exon	FALSE	canonical	3	9	junction_4	11.0077971289962	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTACAGAGTATATTC	NA	False	NA	-1	True	AATAAA	-29	NA	37081069	37035528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.3	chr8	-	5353	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	33	773	33	-773	multi-exon	FALSE	canonical	3	9	junction_4	11.0077971289962	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTATTTATACCTCAG	NA	False	NA	-1	True	GATAAA	-28	NA	37081064	37035677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.4	chr8	-	4940	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	16	1203	16	-1203	multi-exon	FALSE	canonical	3	9	junction_4	11.0077971289962	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAACAGCGCAGGGT	NA	False	NA	NA	False	NA	NA	NA	37081081	37036107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.5	chr8	-	3977	1	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	2834	-210	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTTGTTTCTAATT	NA	False	NA	NA	False	NA	NA	NA	37041589	37037612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_37037600_37041600
ES.32819.6	chr8	-	3603	13	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	38	3379	-31	-881	5prime_fragment	FALSE	canonical	3	9	junction_3	11.3357840487546	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTTGGTGTTTGCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	37081059	37038283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.7	chr8	-	5554	5	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-29	-7832	intron_retention	FALSE	canonical	3	26	junction_3	8.33666600026653	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081057	37047130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.32819.8	chr8	-	4800	5	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-2	-7832	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.7675969112314	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081030	37047130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_37050032_37050694_37052122_37060530_37060613_37066522_37066595_37080712
ES.32819.9	chr8	-	4933	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	-2	12226	-2	-7832	5prime_fragment	FALSE	canonical	3	26	junction_4	7.49933330370107	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081099	37047130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ES.3282.1	chr10	-	2503	4	Antisense	novelGene_ENSMUSG00000019564.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCATCCATTCTGTAC	769	False	NA	NA	False	NA	NA	NA	79788185	79784019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79784877_79785196_79785445_79786459_79786752_79787079
ES.3282.2	chr10	-	4166	1	Antisense	novelGene_ENSMUSG00000019564.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGCATCCATTCTGTAC	769	False	NA	NA	False	NA	NA	NA	79788185	79784019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79784000_79788200
ES.32820.1	chr8	-	176	1	Intergenic	novelGene_26787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	37103443	37103267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_37103300_37103400
ES.32821.1	chr8	+	182	1	Intergenic	novelGene_26788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAATTAGGG	NA	False	NA	NA	False	NA	NA	NA	37139567	37139749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_37139600_37139700
ES.32822.1	chr8	+	180	1	Intergenic	novelGene_26789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAATGACTATTTG	NA	False	NA	NA	False	NA	NA	NA	37657840	37658020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_37657800_37658000
ES.32823.1	chr8	+	107	1	Intergenic	novelGene_26790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTTAGAGTTGGGATT	NA	False	NA	NA	False	NA	NA	NA	37826402	37826509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_37826400_37826500
ES.32824.1	chr8	-	179	1	Intergenic	novelGene_26791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	38609543	38609364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_38609400_38609500
ES.32825.1	chr8	+	349	1	Intergenic	novelGene_26793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTGATATTTATTT	NA	False	NA	NA	False	TATAAA	-45	NA	38762781	38763130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_38762800_38763100
ES.32825.2	chr8	+	178	1	Intergenic	novelGene_26792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGTAGGATAATGGA	NA	False	NA	NA	False	NA	NA	NA	38762781	38762959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_38762800_38763000
ES.32826.1	chr8	+	159	1	Intergenic	novelGene_26794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	38807734	38807893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_38807700_38807900
ES.32827.1	chr8	+	3246	7	NNC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	2	27636	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	58.7662507075466	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTTTTTTATTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	39473000	39568112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39565880
ES.32827.10	chr8	+	1350	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	26	-4	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	47.9785108147387	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCATGTTTTAGAATT	NA	False	NA	25	True	AATAAA	-15	NA	39473089	39618151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.11	chr8	+	2581	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	184	-18	119	18	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTAAAGGCTAATAGTA	NA	False	NA	NA	False	ATTAAA	-27	NA	39473182	39619385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.12	chr8	+	3151	9	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	40668	-758	40603	758	3prime_fragment	FALSE	canonical	3	143	junction_3	13.8202749610853	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGGTGAGTTATAGGCA	NA	False	NA	NA	False	AATAAA	-18	NA	39513666	39620125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.13	chr8	+	1583	7	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	61774	523	61709	-523	3prime_fragment	FALSE	canonical	3	143	junction_1	13.9214063785077	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTTAAACATTTTTTG	NA	False	NA	NA	False	AATATA	-17	NA	39534772	39618844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.14	chr8	+	4434	5	NIC	ENSMUSG00000118664.1	novel	1264	8	NA	NA	65511	0	intron_retention	FALSE	canonical	3	8	junction_4	78.3134726595622	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTTAGAATTGTGT	NA	False	NA	29	True	AATAAA	-19	NA	39538574	39618155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39614047
ES.32827.15	chr8	+	617	5	NNC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	113203	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	73.5085029095274	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATGTTTTAGAATTGT	NA	False	NA	27	True	AATAAA	-17	NA	39586266	39618153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_39586367_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.2	chr8	+	5649	10	NNC	ENSMUSG00000118664.1	novel	2811	11	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_9	51.4063934151251	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATGTTTTAGAATTGT	NA	False	NA	27	True	AATAAA	-17	NA	39473006	39618153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39613742
ES.32827.3	chr8	+	1698	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	16	1033	16	179	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTTTGTTATTCTT	NA	False	NA	17	True	TATAAA	-17	NA	39473014	39618334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.4	chr8	+	1518	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	16	1213	16	-1	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTTTTAGAATTGTG	NA	False	NA	28	True	AATAAA	-18	NA	39473014	39618154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.5	chr8	+	2043	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	17	687	17	525	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTTTGTTGTTAAC	NA	False	NA	NA	False	AATACA	-17	NA	39473015	39618680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.6	chr8	+	1604	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	17	177	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	53.444919075624	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTTTTGTTATTC	NA	False	NA	15	True	TATAAA	-15	NA	39473015	39618332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39617866
ES.32827.7	chr8	+	1760	11	FSM	ENSMUSG00000118664.1	ENSMUST00000239509.1	2811	11	18	1033	18	179	multi-exon	FALSE	canonical	0	0	junction_10	62.7792959501777	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTTTGTTATTCTT	NA	False	NA	17	True	TATAAA	-17	NA	39473016	39618334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39614047_39614112_39617866
ES.32827.8	chr8	+	1587	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	-28	177	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	47.9785108147387	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTTTTGTTATTC	NA	False	NA	15	True	TATAAA	-15	NA	39473033	39618332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ES.32827.9	chr8	+	1279	8	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	67.1574452237397	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATGTTTTAGAATTGT	NA	False	NA	27	True	AATAAA	-17	NA	39473071	39618153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39617866
ES.32828.1	chr8	-	193	1	Intergenic	novelGene_26795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAAGTGTGTGAGTG	NA	False	NA	NA	False	NA	NA	NA	39556628	39556435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_39556400_39556600
ES.32829.1	chr8	-	8320	1	Antisense	novelGene_ENSMUSG00000118664.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCT	9622	False	NA	NA	False	CATAAA	-21	NA	39620717	39612397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_39612400_39620700
ES.3283.1	chr10	+	2934	6	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-73	81	intron_retention	FALSE	canonical	3	1673	junction_3	27.2719636256724	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2213	False	NA	31	True	ACTAAA	-19	NA	79795912	79803526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801958_79802039_79802105_79802178_79803223_79803304
ES.3283.10	chr10	+	1420	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	78	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_4	491.78791976287	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2286	False	NA	28	True	ACTAAA	-16	NA	79795985	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801790_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.11	chr10	+	1430	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	537.000126445487	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2286	False	NA	28	True	ACTAAA	-16	NA	79795985	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801780_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.12	chr10	+	2013	1	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	-191	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAATAAAACTATCCGG	2286	False	NA	NA	False	NA	NA	NA	79795985	79797998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796000_79798000
ES.3283.13	chr10	+	3914	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	0	-3	0	3	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCTGCTACTTTTG	2286	False	NA	NA	False	NA	NA	NA	79795985	79806040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.15	chr10	+	2264	7	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	1	78	intron_retention	FALSE	canonical	3	1673	junction_3	24.9243299252402	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2287	False	NA	28	True	ACTAAA	-16	NA	79795986	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
ES.3283.16	chr10	+	2957	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	1	953	1	-953	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTGGCTTTTTTATT	2287	False	NA	7	True	ATTAAA	-21	NA	79795986	79805084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.17	chr10	+	1494	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	1	86	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2287	False	NA	36	True	ACTAAA	-24	NA	79795986	79803531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
ES.3283.18	chr10	+	2068	9	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	1	78	intron_retention	FALSE	canonical	0	0	junction_2	569.243014340097	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2287	False	NA	28	True	ACTAAA	-16	NA	79795986	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79797026_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79803223_79803304
ES.3283.2	chr10	+	1440	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	-34	2505	-34	87	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGGTTGTTCTGTCCCT	2252	False	NA	37	True	ACTAAA	-25	NA	79795951	79803532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.21	chr10	+	3731	8	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	1	-957	intron_retention	FALSE	canonical	3	1673	junction_3	23.4755626304531	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTTGCTGGCTTTTT	2287	False	NA	3	True	ATTAAA	-17	NA	79795986	79805080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.22	chr10	+	2977	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	1	-956	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_4	491.78791976287	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTTGCTGGCTTTTTT	2287	False	NA	4	True	ATTAAA	-18	NA	79795986	79805081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801790_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.24	chr10	+	3026	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-1	-957	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTTGCTGGCTTTTT	2288	False	NA	3	True	ATTAAA	-17	NA	79795987	79805080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.25	chr10	+	1384	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-1	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	541.892773321234	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2288	False	NA	28	True	ACTAAA	-16	NA	79795987	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802050_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.26	chr10	+	2242	7	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-1	78	intron_retention	FALSE	canonical	3	23	junction_1	629.101652270036	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2288	False	NA	28	True	ACTAAA	-16	NA	79795987	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796202_79796835_79796947_79800759_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.27	chr10	+	888	7	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	637.229790229204	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTAAATTGTGCGCCT	2289	False	NA	21	True	ACTAAA	-9	NA	79795988	79803516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796090_79801808_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.28	chr10	+	3975	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	-23	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAACAAACAA	2289	False	NA	NA	False	NA	NA	NA	79795988	79806014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
ES.3283.29	chr10	+	1326	8	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	78	intron_retention	FALSE	canonical	2	80	junction_3	571.663594525769	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2289	False	NA	28	True	ACTAAA	-16	NA	79795988	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.3	chr10	+	3054	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-10	-957	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATCTTGCTGGCTTTTT	2276	False	NA	3	True	ATTAAA	-17	NA	79795975	79805080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
ES.3283.30	chr10	+	1507	9	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	78	intron_retention	FALSE	canonical	3	144	junction_4	517.872028111193	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2289	False	NA	28	True	ACTAAA	-16	NA	79795988	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801790_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
ES.3283.31	chr10	+	1565	9	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	78	intron_retention	FALSE	canonical	3	144	junction_3	518.559965192069	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2291	False	NA	28	True	ACTAAA	-16	NA	79795990	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79801186_79801790_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.32	chr10	+	1542	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	78	intron_retention	FALSE	canonical	3	1673	junction_4	33.7333292160735	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2291	False	NA	28	True	ACTAAA	-16	NA	79795990	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.33	chr10	+	1698	7	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	78	intron_retention	FALSE	canonical	3	1700	junction_4	30.8261252835967	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2291	False	NA	28	True	ACTAAA	-16	NA	79795990	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801186_79801813_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.34	chr10	+	1614	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	5	2292	2	-125	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCCTGCAACTGACA	2291	False	NA	NA	False	GGGGCT	-36	NA	79795990	79803745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.35	chr10	+	1365	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	75	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	539.988477243316	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAATTGTGCGCCTTGGT	2291	False	NA	25	True	ACTAAA	-13	NA	79795990	79803520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801067_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.36	chr10	+	1386	2	NNC	ENSMUSG00000035754.9	novel	1572	2	NA	NA	2	-179	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCCGGGGTCCTGAGAAA	2291	False	NA	NA	False	NA	NA	NA	79795990	79798010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796202_79796835
ES.3283.37	chr10	+	1579	8	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	78	intron_retention	FALSE	canonical	3	144	junction_4	548.434134605059	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2291	False	NA	28	True	ACTAAA	-16	NA	79795990	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801790_79801958_79802039_79802561_79803153_79803223_79803304
ES.3283.38	chr10	+	1388	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	2	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.060513298919	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2291	False	NA	28	True	ACTAAA	-16	NA	79795990	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796209_79796841_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.40	chr10	+	1377	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	4	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	715.31201859791	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2293	False	NA	28	True	ACTAAA	-16	NA	79795992	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802399_79802561_79803160_79803223_79803304
ES.3283.43	chr10	+	1294	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	35	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	540.060513298919	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2324	False	NA	28	True	ACTAAA	-16	NA	79796023	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796142_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.44	chr10	+	1963	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	51	70	intron_retention	FALSE	canonical	3	1673	junction_4	23.6524311646816	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTAAATTGTGCGCC	2340	False	NA	20	True	ACTAAA	-8	NA	79796039	79803515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.45	chr10	+	5328	2	FSM	ENSMUSG00000035754.9	ENSMUST00000218515.2	920	2	-3197	-1211	-1666	-956	multi-exon	FALSE	canonical	3	1755	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTTGCTGGCTTTTTT	5972	False	NA	4	True	ATTAAA	-18	NA	79799671	79805081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79803223_79803304
ES.3283.46	chr10	+	1429	5	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-95	65	intron_retention	FALSE	canonical	3	1700	junction_1	22.5	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACAATTCTTAAATTGT	7543	False	NA	15	True	ACTAAA	-3	NA	79801242	79803510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.47	chr10	+	1801	5	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	57	78	intron_retention	FALSE	canonical	3	1673	junction_1	29.8244865840135	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	7695	False	NA	28	True	ACTAAA	-16	NA	79801394	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79801958_79802039_79802105_79802178_79802304_79802393_79803223_79803304
ES.3283.5	chr10	+	1504	9	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-10	78	intron_retention	FALSE	canonical	3	144	junction_4	517.872028111193	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2276	False	NA	28	True	ACTAAA	-16	NA	79795975	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801790_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.6	chr10	+	1131	8	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-10	78	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	558.740639331717	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2276	False	NA	28	True	ACTAAA	-16	NA	79795975	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.7	chr10	+	2184	8	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-9	78	intron_retention	FALSE	canonical	3	1673	junction_3	23.4755626304531	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2277	False	NA	28	True	ACTAAA	-16	NA	79795976	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.8	chr10	+	1478	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-7	78	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGCGCCTTGGTTGT	2279	False	NA	28	True	ACTAAA	-16	NA	79795978	79803523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
ES.3283.9	chr10	+	6750	4	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	-2	81	intron_retention	FALSE	canonical	3	1673	junction_2	33.8755893757667	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCGCCTTGGTTGTTCT	2284	False	NA	31	True	ACTAAA	-19	NA	79795983	79803526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79796207_79796835_79801958_79802039_79803223_79803304
ES.32830.1	chr8	+	3289	14	NIC	ENSMUSG00000039478.16	novel	2219	15	NA	NA	547	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	1.73716766009788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGAGTTATACTTACCCA	8809	False	NA	18	True	AATAAA	-22	NA	40761045	40839352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40761452_40788850_40789005_40801980_40802060_40805076_40805125_40807343_40807427_40809896_40809969_40812450_40812490_40819189_40819286_40828577_40828679_40829136_40829309_40831872_40831982_40833712_40833871_40835149_40835219_40837649
ES.32830.2	chr8	+	983	8	ISM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	571	25120	571	-16052	5prime_fragment	FALSE	canonical	1	2	junction_7	1.67819144635296	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTATTGGAGTTTGTT	8833	False	NA	NA	False	TATAAA	-17	NA	40761069	40812583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896_40809969_40812450
ES.32830.3	chr8	+	3290	15	FSM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	575	-1646	575	0	multi-exon	FALSE	canonical	1	2	junction_7	1.75691055374984	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCCGAGTTATACTTAC	8837	False	NA	15	True	AATAAA	-19	NA	40761073	40839349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896_40809969_40812450_40812490_40819189_40819286_40828577_40828679_40829136_40829309_40831872_40831982_40833712_40833871_40835149_40835219_40837649
ES.32830.4	chr8	+	3429	1	Intergenic	novelGene_26796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATAAAATGGAAGTTT	2100	False	NA	NA	False	AATAAA	-43	NA	40795384	40798813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_40795400_40798800
ES.32831.1	chr8	-	4029	1	Antisense	novelGene_ENSMUSG00000039478.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATTTTCTGTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	40842402	40838373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_40838400_40842400
ES.32832.1	chr8	+	3647	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-265	-1	-265	1	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTCTCCATCCAGTTA	955	False	NA	3	True	AATAAA	-27	NA	40876590	40938767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.2	chr8	+	1670	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-46	1757	-46	-301	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGATTAAGTTTATGGGCC	1174	False	NA	NA	False	ATTAAA	-25	NA	40876809	40937009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.3	chr8	+	2541	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	-41	881	-41	575	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAAAATCTC	1179	False	NA	NA	False	NA	NA	NA	40876814	40937885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.4	chr8	+	3384	13	NIC	ENSMUSG00000039470.16	novel	3381	13	NA	NA	-22	0	intron_retention	FALSE	canonical	2	3	junction_3	22.0359554667669	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTCCATCCAGTT	1198	False	NA	2	True	AATAAA	-26	NA	40876833	40938766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40877211_40898818_40898846_40900091_40900187_40907557_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.5	chr8	+	1621	12	NNC	ENSMUSG00000039470.16	novel	3381	13	NA	NA	-19	-308	intron_retention	FALSE	non_canonical	0	0	junction_1	23.3563837345815	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCCGAGATTAAGTTT	1201	False	NA	NA	False	ATTAAA	-18	NA	40876836	40937002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40877215_40900083_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.6	chr8	+	3247	11	NNC	ENSMUSG00000039470.16	novel	3381	13	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	24.4	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTCCATCCAGTT	1209	False	NA	2	True	AATAAA	-26	NA	40876844	40938766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40877211_40907561_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.7	chr8	+	3366	13	NNC	ENSMUSG00000039470.16	novel	3381	13	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	29.6314163234452	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCCGTCTCCATCCAG	1228	False	NA	0	True	AATAAA	-24	NA	40876863	40938764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40877211_40898818_40898846_40900091_40900187_40907557_40907660_40909071_40909142_40909689_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32832.8	chr8	+	2685	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	30	666	5	-666	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCAATCACTCATTCT	1250	False	NA	NA	False	AATAGA	-12	NA	40876885	40938100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ES.32833.1	chr8	-	2253	2	Antisense	novelGene_ENSMUSG00000039470.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAGCCAAAAAAA	105	False	NA	NA	False	NA	NA	NA	40886996	40884598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_40885126_40885270
ES.32834.1	chr8	-	162	1	Intergenic	novelGene_26797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAATAAATAAATAAATC	4796	False	NA	NA	False	NA	NA	NA	40894259	40894097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_40894100_40894300
ES.32835.1	chr8	+	2255	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	-371	4118	-371	96	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTTCTTCCTGTCAGC	NA	False	NA	109	True	NA	NA	NA	40964452	40999680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.10	chr8	+	4692	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	1	-1220	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	65.3988532009545	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACATACTGCTTGTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	40964844	41002578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40996850_40996995_40997984_40998066_40999316
ES.32835.12	chr8	+	4763	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	24	1215	4	-1215	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGCTTGTTTTTCCAA	NA	False	NA	NA	False	AATAAA	-37	NA	40964847	41002583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.13	chr8	+	2509	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	28	3465	8	749	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACTTTTTAAACATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	40964851	41000333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.14	chr8	+	4474	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	13	3	intron_retention	FALSE	canonical	3	191	junction_7	13.080137613955	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGCTAATTTTTAATAT	NA	False	NA	16	True	ATTAAA	-16	NA	40964856	40999587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40996995_40997984_40998066_40999316
ES.32835.15	chr8	+	2325	10	FSM	ENSMUSG00000031600.12	ENSMUST00000238339.2	1442	10	-49	-834	16	834	multi-exon	FALSE	canonical	3	191	junction_7	13.9505298806396	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTGTCTTAATGTA	NA	False	NA	NA	False	ATTAAA	-12	NA	40964859	40997916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850
ES.32835.16	chr8	+	8679	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	19	0	intron_retention	FALSE	canonical	3	191	junction_7	13.080137613955	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	12	True	NA	NA	NA	40964862	41003798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40996995_40997984_40998066_40999316
ES.32835.17	chr8	+	4518	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	40	1444	20	-1444	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTACTAGAGGTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	40964863	41002354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.18	chr8	+	4131	11	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	249	0	intron_retention	FALSE	canonical	2	7	junction_10	66.9887303954926	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTAGCTAATTTTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	40965157	40999584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40996995_40997984_40998027_40999316
ES.32835.19	chr8	+	5250	1	NIC	ENSMUSG00000031600.12	novel	3818	9	NA	NA	-10094	-745	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	40986370	40991620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40986400_40991600
ES.32835.2	chr8	+	6024	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	-17	-5	-17	5	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTGTGGTGTCTTATC	NA	False	NA	17	True	NA	NA	NA	40964806	41003803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.20	chr8	+	6338	3	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	-1284	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	111	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	12	True	NA	NA	NA	40995180	41003798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40996995_40997984_40998027_40999316
ES.32835.3	chr8	+	1818	12	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	65.7582600159902	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGCTAATTTTTAAT	NA	False	NA	14	True	ATTAAA	-14	NA	40964815	40999585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989889_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.4	chr8	+	5903	11	NIC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	68.5513676012375	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTTGTGGTGTCTTA	NA	False	NA	15	True	NA	NA	NA	40964824	41003801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_40965275_40979967_40980043_40981358_40981474_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.5	chr8	+	1744	11	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	87.9661866855669	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGCTAATTTTTAAT	NA	False	NA	14	True	ATTAAA	-14	NA	40964825	40999585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40965301_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40996850_40996995_40997984_40998066_40999316
ES.32835.6	chr8	+	5412	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	3	587	3	-587	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCTTTATTAGAATGTA	NA	False	NA	NA	False	ATTAAA	-3	NA	40964826	41003211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.7	chr8	+	2863	12	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	7	1080	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	66.1848151169595	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCATGTTTGTGGAA	NA	False	NA	NA	False	CATAAA	-18	NA	40964830	41000664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996848_40996995_40997984_40998066_40999316
ES.32835.8	chr8	+	6010	12	NNC	ENSMUSG00000031600.12	novel	6002	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	64.6687682484896	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	12	True	NA	NA	NA	40964841	41003798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_40965301_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32835.9	chr8	+	1720	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	18	4264	-2	-50	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCCTGTATTTAAGTT	NA	False	NA	1	True	ACTAAA	-15	NA	40964841	40999534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ES.32836.1	chr8	+	4045	1	Intergenic	novelGene_26799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAAAAAAAAAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	41066144	41070189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41066100_41070200
ES.32837.1	chr8	+	1554	1	Intergenic	novelGene_26800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACACT	NA	False	NA	NA	False	NA	NA	NA	41082017	41083571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41082000_41083600
ES.32838.1	chr8	-	2612	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	11	-8	11	8	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGGCTTTGGTTTTG	NA	False	NA	7	True	AATAAA	-31	NA	40964784	40945572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.10	chr8	-	2485	6	FSM	ENSMUSG00000031601.17	ENSMUST00000135269.8	2461	6	-19	-5	-15	0	multi-exon	FALSE	canonical	3	8	junction_1	206.645203186524	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964778	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.11	chr8	-	2626	7	NNC	ENSMUSG00000031601.17	novel	2542	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	195.288177374418	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964358	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964130
ES.32838.12	chr8	-	3639	7	NNC	ENSMUSG00000031601.17	novel	2542	7	NA	NA	-15	0	intron_retention	FALSE	canonical	3	14	junction_1	245.285151518708	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964360	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40955329_40955369_40960495_40960690_40963055
ES.32838.13	chr8	-	4266	6	NIC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-1	0	intron_retention	FALSE	canonical	3	422	junction_1	71.4915379607964	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTGTGACTGATGG	NA	False	NA	-4	True	AATAAA	-20	NA	40964760	40945583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.14	chr8	-	2637	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	195.288177374418	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGGTTGTGACTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	40964305	40945585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964063
ES.32838.15	chr8	-	2714	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.489471568491	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATGGTTGTGACTGA	NA	False	NA	-7	True	AATAAA	-17	NA	40964341	40945586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964130
ES.32838.16	chr8	-	2663	8	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	248.324590084865	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTATATGGTTGTGACT	NA	False	NA	-9	True	AATAAA	-15	NA	40964362	40945588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40955329_40955369_40960495_40960690_40963055_40963268_40964130
ES.32838.17	chr8	-	3716	8	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	226.745204480937	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTATATGGTTGTGAC	NA	False	NA	-10	True	AATAAA	-14	NA	40964769	40945589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40954232_40955369_40960495_40960690_40963055_40963268_40964580
ES.32838.18	chr8	-	2220	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	25	370	-7	126	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTGTTTATTTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	40964770	40945950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.19	chr8	-	5521	4	FSM	ENSMUSG00000031601.17	ENSMUST00000142455.8	679	4	-3739	-1103	2774	125	multi-exon	FALSE	canonical	3	422	junction_2	45.8427263102398	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTGTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	40957852	40945951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792
ES.32838.2	chr8	-	2626	8	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	222.709291614491	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964769	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40955329_40955369_40960495_40960690_40963055_40963268_40964580
ES.32838.20	chr8	-	2082	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	35	498	-1	-2	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATAAATGTGATTTCA	NA	False	NA	NA	False	AATAAA	-4	NA	40964760	40946078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.21	chr8	-	2091	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-16	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	195.288177374418	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAACAAGTCTTAAGG	NA	False	NA	NA	False	ATTAAA	-5	NA	40964361	40946120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964130
ES.32838.22	chr8	-	2496	6	ISM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	35	1773	-1	-299	5prime_fragment	FALSE	canonical	3	422	junction_1	71.4915379607964	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGCTTTTTAGAACG	NA	False	NA	NA	False	ATTAAA	-24	NA	40964760	40947353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.23	chr8	-	6377	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	1	-5652	1	-933	multi-exon	FALSE	canonical	3	487	junction_2	66.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATACTTTTTCATGAA	NA	False	NA	NA	False	AATAAA	-17	NA	40964762	40954706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40960690_40963055_40963268_40964580
ES.32838.24	chr8	-	3071	3	NNC	ENSMUSG00000031601.17	novel	726	3	NA	NA	16	2329	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	310	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATAGTTGCAGTG	NA	False	NA	NA	False	AATAGA	-14	NA	40964329	40958029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40960690_40963055_40963268_40964130
ES.32838.25	chr8	-	2211	2	ISM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	-1	-171	-1	171	intron_retention	FALSE	canonical	3	620	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGTTGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	40964764	40960187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_40960690_40963055
ES.32838.26	chr8	-	803	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	-23	-54	9	54	multi-exon	FALSE	canonical	3	487	junction_2	66.5	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTGAACCTGTATTT	NA	False	NA	50	True	TTTAAA	-22	NA	40964786	40960304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40960690_40963055_40963268_40964580
ES.32838.27	chr8	-	4389	1	NIC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	12	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTAGTTATAGAGA	NA	False	NA	-4	True	AATAAA	-15	NA	40964747	40960358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_40960400_40964700
ES.32838.3	chr8	-	5484	4	FSM	ENSMUSG00000031601.17	ENSMUST00000142455.8	679	4	-3333	-1472	3180	0	multi-exon	FALSE	canonical	3	422	junction_2	45.8427263102398	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40957446	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792
ES.32838.5	chr8	-	3593	6	NNC	ENSMUSG00000031601.17	novel	2542	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	14	junction_1	200.565600240919	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964353	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055
ES.32838.6	chr8	-	2866	8	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	248.39591504742	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964765	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40954232_40954407_40960495_40960690_40963055_40963268_40964580
ES.32838.7	chr8	-	3911	6	FSM	ENSMUSG00000031601.17	ENSMUST00000149992.2	2982	6	-435	-494	15	0	multi-exon	FALSE	canonical	3	422	junction_2	73.8495768437437	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964780	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055
ES.32838.8	chr8	-	2615	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	190.558535771966	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964761	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948809_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32838.9	chr8	-	2688	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	186.712271214889	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40964761	40945582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ES.32839.1	chr8	-	1360	2	Antisense	novelGene_ENSMUSG00000031600.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8416	False	NA	NA	False	NA	NA	NA	40998359	40996009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_40996995_40997984
ES.3284.1	chr10	-	2239	9	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	131	0	intron_retention	FALSE	canonical	3	10	junction_2	41.59026328361	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	False	NA	-17	True	AATAAA	-18	NA	79820033	79812951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79813688_79813796_79814259_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.10	chr10	-	2222	10	NIC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	126	-2	intron_retention	FALSE	canonical	3	84	junction_3	20.8273324690844	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820038	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79813688_79813796_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.12	chr10	-	2110	11	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	37.310722319462	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820102	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814259_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.13	chr10	-	1902	10	NNC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	47	-4	intron_retention	FALSE	canonical	1	3	junction_1	40.6195841594169	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCGTGTAGTTCCTCA	NA	False	NA	-21	True	AATAAA	-14	NA	79819827	79812955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79813634_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.14	chr10	-	2383	9	NIC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	17	-4	intron_retention	FALSE	canonical	3	99	junction_8	13.8541510024974	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCGTGTAGTTCCTCA	NA	False	NA	-21	True	AATAAA	-14	NA	79820147	79812955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.15	chr10	-	2087	1	NIC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	62	-4219	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTAGTAGAGATAGAGA	NA	False	NA	NA	False	NA	NA	NA	79820102	79818015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79818000_79820100
ES.3284.2	chr10	-	2225	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	-2	2	-2	-2	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820166	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.3	chr10	-	2246	10	FSM	ENSMUSG00000013858.15	ENSMUST00000124536.2	1767	10	-241	-238	49	-2	multi-exon	FALSE	canonical	3	99	junction_9	17.0257611638915	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820115	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.4	chr10	-	5042	6	NIC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	1389	-2	intron_retention	FALSE	canonical	3	112	junction_5	15.0279739153354	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79818485	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79813688_79813796_79814440_79814526_79814825_79814931_79815043_79815124_79815225_79815329
ES.3284.7	chr10	-	2050	11	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	49.880256615218	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79820100	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79813688_79813796_79813839_79814021_79814155_79814225_79814259_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.8	chr10	-	2043	10	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	-36	-2	intron_retention	FALSE	canonical	3	10	junction_3	39.3025617234385	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79819910	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79813688_79813796_79814155_79814225_79814259_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ES.3284.9	chr10	-	1397	5	NIC	ENSMUSG00000013858.15	novel	1767	10	NA	NA	45	-2	intron_retention	FALSE	canonical	3	104	junction_4	9.98436277385793	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGTGTAGTTCCTCAGC	NA	False	NA	-19	True	AATAAA	-16	NA	79814729	79812953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814628_79814701
ES.32840.1	chr8	-	379	1	Intergenic	novelGene_26798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACCTTCGTCATGGTA	7991	False	NA	NA	False	NA	NA	NA	40998784	40998405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_40998400_40998800
ES.32841.1	chr8	-	5533	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-11	-3034	2	3028	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGTGAGCAAGTGTGG	NA	False	NA	NA	False	AATACA	-24	NA	41087830	41001107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.10	chr8	-	3572	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	2	1190	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGAGCATTTTCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	41087830	41002945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
ES.32841.11	chr8	-	3537	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-12	-1037	1	1031	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTAAAACATAGTGTGA	NA	False	NA	79	True	AATACA	-19	NA	41087831	41003104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.12	chr8	-	3514	14	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	88	936	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	75.4958363207876	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTATAACAGTACTTT	NA	False	NA	-16	True	AATAAA	-19	NA	41087714	41003199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087551
ES.32841.13	chr8	-	3319	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	1	936	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTATAACAGTACTTT	NA	False	NA	-16	True	AATAAA	-19	NA	41087831	41003199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
ES.32841.14	chr8	-	3229	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	935	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	79.4725668950543	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTTATAACAGTACTT	NA	False	NA	-17	True	AATAAA	-18	NA	41087777	41003200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41059801_41059965_41061936_41062060_41087740
ES.32841.15	chr8	-	3419	15	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	934	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	97.6054113588515	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTTTATAACAGTACT	NA	False	NA	-18	True	AATAAA	-17	NA	41087777	41003201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41075585_41075619_41087740
ES.32841.16	chr8	-	3296	13	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	107	934	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	106.520603119251	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTTTATAACAGTACT	NA	False	NA	-18	True	AATAAA	-17	NA	41087695	41003201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087615
ES.32841.17	chr8	-	3407	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	15	-934	-2	928	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTAGTTTTTTATAAC	NA	False	NA	-24	True	AATAAA	-11	NA	41087804	41003207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.18	chr8	-	2547	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-35	-24	-14	18	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGGAGCATCTTCTG	NA	False	NA	62	True	TATAAA	-19	NA	41087854	41004117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.19	chr8	-	4691	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	0	intron_retention	FALSE	canonical	3	263	junction_12	16.147540232356	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCATTTTATTTTTCC	NA	False	NA	44	True	AATAAA	-29	NA	41087777	41004135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.20	chr8	-	2483	15	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	97.6054113588515	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	NA	False	NA	39	True	AATAAA	-24	NA	41087780	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41075585_41075619_41087740
ES.32841.22	chr8	-	1856	9	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	9858	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	125.443214244534	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	8223	False	NA	39	True	AATAAA	-24	NA	41033699	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41033259_41033398_41033550
ES.32841.23	chr8	-	2336	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_12	79.1157731148192	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	NA	False	NA	39	True	AATAAA	-24	NA	41087789	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41087740
ES.32841.24	chr8	-	2588	15	NIC	ENSMUSG00000039431.17	novel	2799	15	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	99.4313679820182	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	NA	False	NA	39	True	AATAAA	-24	NA	41087830	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41009485_41009574_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.25	chr8	-	7863	7	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	17143	1	intron_retention	TRUE	non_canonical	0	0	junction_6	108.873652562143	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	NA	False	NA	39	True	AATAAA	-24	NA	41026414	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41013948_41015610_41015737_41017000_41019731_41025240
ES.32841.27	chr8	-	3149	15	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	100.364844646003	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTAATCATTTTATT	NA	False	NA	39	True	AATAAA	-24	NA	41087814	41004140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41068520_41069186_41087740
ES.32841.28	chr8	-	2633	14	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	75.4958363207876	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATAAATGTAATCATTTT	NA	False	NA	36	True	AATAAA	-21	NA	41087777	41004143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087551
ES.32841.29	chr8	-	2209	12	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	82.870206192456	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTATAAATGTAATCAT	NA	False	NA	33	True	AATAAA	-18	NA	41087831	41004146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41087740
ES.32841.3	chr8	-	5547	15	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	3018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	100.364844646003	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCCTGGCCTGGGTGA	NA	False	NA	NA	False	AATACA	-14	NA	41087777	41001117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41086396_41086474_41087740
ES.32841.30	chr8	-	2307	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	25	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	78.4022303395906	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTATAAATGTAATCA	NA	False	NA	32	True	AATAAA	-17	NA	41087777	41004147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.34	chr8	-	2203	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	11	274	-6	-274	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGAAGACTGATCATCA	NA	False	NA	NA	False	AAAAAG	-34	NA	41087808	41004415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.35	chr8	-	2636	12	FSM	ENSMUSG00000039431.17	ENSMUST00000174205.8	2679	12	40	3	7	-3	multi-exon	FALSE	canonical	3	263	junction_11	14.894116648657	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGCTTGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	41087795	41007704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.36	chr8	-	7890	1	NIC	ENSMUSG00000039431.17	novel	2799	15	NA	NA	6590	-12006	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAAACATGGCAGGCCT	4955	False	NA	NA	False	NA	NA	NA	41036967	41029077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41029100_41037000
ES.32841.4	chr8	-	5273	13	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-1	2911	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	78.4022303395906	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTTTAATGTCTGG	NA	False	NA	NA	False	NA	NA	NA	41087820	41001224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.5	chr8	-	5409	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-12	-2909	1	2903	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAAATGTCTTGGTTTA	NA	False	NA	NA	False	AATAAA	-44	NA	41087831	41001232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.6	chr8	-	5364	14	NNC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	-7	2823	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.8022897834194	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGCATATTCAGATAT	NA	False	NA	NA	False	AATAAA	-13	NA	41087847	41001312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41004974_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32841.7	chr8	-	2876	1	Genic_Genomic	ENSMUSG00000039431.17	novel	NA	NA	NA	NA	39251	2705	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAATCCGAGTATGTGT	2469	False	NA	NA	False	NA	NA	NA	41004306	41001430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_41001400_41004300
ES.32841.8	chr8	-	2993	8	NIC	ENSMUSG00000039431.17	novel	2488	14	NA	NA	3332	1284	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	100.94229509366	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGAATGGCTTTTACAG	1697	False	NA	NA	False	AATAAA	-13	NA	41040225	41002851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41040090
ES.32841.9	chr8	-	3747	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	-58	-1201	-37	1195	multi-exon	FALSE	canonical	3	263	junction_13	15.5985130530912	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCATTTTCTGTTGGAA	NA	False	NA	NA	False	AATAAA	-28	NA	41087877	41002940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ES.32842.1	chr8	+	3468	3	Intergenic	novelGene_26801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTGTTTATTTTTGGA	2853	False	NA	NA	False	ATTAAA	-15	NA	41103629	41115988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41104464_41113276_41115667_41115744
ES.32843.1	chr8	-	138	1	FSM	ENSMUSG00000109658.2	ENSMUST00000210267.2	151	1	50	-37	50	37	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCTACCAAGAAGA	NA	False	NA	NA	False	AATAAA	-14	NA	41136636	41136498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41136500_41136600
ES.32844.1	chr8	+	3679	12	FSM	ENSMUSG00000031596.16	ENSMUST00000098816.10	3677	12	-1	-1	-1	1	multi-exon	FALSE	canonical	1	1	junction_4	2.4528613751331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCTCTGGTTGCTACA	NA	False	NA	NA	False	AATAAA	-12	NA	41315431	41371094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ES.32844.2	chr8	+	7681	12	FSM	ENSMUSG00000031596.16	ENSMUST00000098816.10	3677	12	10	-4014	-6	0	multi-exon	FALSE	canonical	1	1	junction_4	2.4528613751331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTTTAGTATGTATAT	NA	False	NA	NA	False	AATAAA	-16	NA	41315442	41375107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ES.32844.3	chr8	+	5676	8	NNC	ENSMUSG00000031596.16	novel	7626	12	NA	NA	9616	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.38190457150472	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTTTAGTATGTATAT	NA	False	NA	NA	False	AATAAA	-16	NA	41361090	41375107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374_41371339_41371710_41371750_41372161
ES.32845.1	chr8	-	2907	1	Intergenic	novelGene_26802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTGGATAGCTGGATAC	NA	False	NA	NA	False	NA	NA	NA	41350695	41347788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41347800_41350700
ES.32846.1	chr8	+	235	1	Intergenic	novelGene_26803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	GGGGCT	-31	NA	41400427	41400662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41400400_41400700
ES.32847.1	chr8	+	152	1	Intergenic	novelGene_26804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGGATGAGTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	41415238	41415390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41415200_41415400
ES.32848.1	chr8	+	2209	1	Genic_Genomic	ENSMUSG00000084960.2	novel	NA	NA	NA	NA	4540	270	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41475314	41477523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_41475300_41477500
ES.32849.1	chr8	+	5711	3	Antisense	novelGene_ENSMUSG00000045636.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGGACTGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	41522673	41528492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_41523563_41523618_41526641_41526692
ES.3285.1	chr10	+	1812	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	-90	738	-90	640	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	1679	False	NA	-59	True	NA	NA	NA	79824327	79831158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ES.3285.2	chr10	+	2597	7	NNC	ENSMUSG00000004665.11	novel	2460	7	NA	NA	1592	640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.1267546022813	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAAAC	34	False	NA	-59	True	NA	NA	NA	79826048	79831158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79826334_79826446_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ES.32850.1	chr8	+	178	1	Intergenic	novelGene_26805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTAAAAAAAAGCAACAAAC	NA	False	NA	NA	False	NA	NA	NA	41551697	41551875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41551700_41551900
ES.32851.1	chr8	+	3094	1	Intergenic	novelGene_26806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGATTTTCTAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	41567742	41570836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41567700_41570800
ES.32852.1	chr8	+	178	1	Intergenic	novelGene_26807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTACTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	41593228	41593406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41593200_41593400
ES.32853.1	chr8	+	178	1	Intergenic	novelGene_26808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	41599981	41600159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41600000_41600200
ES.32854.1	chr8	-	6599	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-49	-2	-49	2	multi-exon	TRUE	canonical	3	90	junction_13	16.5128603280297	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTCCTTGCTTTTGA	NA	False	NA	0	True	GATAAA	-23	NA	41586812	41443948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.10	chr8	-	9211	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-38	-3	intron_retention	FALSE	canonical	3	15	junction_10	37.6747778877181	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAATCTTGAGTCCT	NA	False	NA	-9	True	TATAAA	-38	NA	41586801	41443957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.11	chr8	-	6138	12	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-859	-3	intron_retention	FALSE	canonical	0	0	junction_3	35.5432456881696	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAATCTTGAGTCCT	NA	False	NA	-9	True	TATAAA	-38	NA	41536672	41443957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452468_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650
ES.32854.12	chr8	-	4122	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	-27	-131	-27	-3	multi-exon	FALSE	canonical	3	9	junction_9	37.6133677314165	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGAATCTTGAGTCCT	NA	False	NA	-9	True	TATAAA	-38	NA	41494930	41443957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
ES.32854.15	chr8	-	6289	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-34	293	-34	-155	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGGCTAGTTTGAAT	NA	False	NA	NA	False	AATACA	-15	NA	41586797	41444243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.16	chr8	-	6341	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-509	-155	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGGCTAGTTTGAAT	NA	False	NA	NA	False	AATACA	-15	NA	41587272	41444243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
ES.32854.17	chr8	-	6086	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-37	499	-37	-361	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGCCTCTGACATACTT	NA	False	NA	2	True	AATAAA	-27	NA	41586800	41444449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.18	chr8	-	3645	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	-44	363	-44	-363	multi-exon	FALSE	canonical	3	9	junction_9	37.6133677314165	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCAGCCTCTGACATAC	NA	False	NA	0	True	AATAAA	-25	NA	41494947	41444451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
ES.32854.19	chr8	-	6231	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-35	-364	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	-1	True	AATAAA	-24	NA	41586798	41444452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.2	chr8	-	6720	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGAGTCCTTGCTTTT	NA	False	NA	-2	True	TATAAA	-45	NA	41586785	41443950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.20	chr8	-	10610	12	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	1	-364	intron_retention	FALSE	canonical	3	11	junction_11	33.5317784391054	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	-1	True	AATAAA	-24	NA	41586762	41444452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.21	chr8	-	6639	18	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-18564	-366	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.3983528120951	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGCAGCCTCTGACA	NA	False	NA	-3	True	AATAAA	-22	NA	41605327	41444454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940_41587430_41590725_41590857_41592597_41592689_41603091_41603144_41605249
ES.32854.22	chr8	-	8093	12	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-33	-366	intron_retention	FALSE	canonical	3	90	junction_11	16.0531143189988	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGCAGCCTCTGACA	NA	False	NA	-3	True	AATAAA	-22	NA	41586796	41444454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.24	chr8	-	5877	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-14	-367	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	31.6824107026122	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586777	41444455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.25	chr8	-	7100	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-13	-367	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586776	41444455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.26	chr8	-	6157	15	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	1	-367	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.7487319301129	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586754	41444455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41448529_41448653_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.27	chr8	-	3846	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-30	-367	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	35.5937728636157	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586793	41444455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41586517
ES.32854.29	chr8	-	6986	13	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-324	-369	intron_retention	FALSE	canonical	3	11	junction_12	32.2829289253624	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAATGGCAGCCTCTG	NA	False	NA	-6	True	AATAAA	-19	NA	41587087	41444457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
ES.32854.3	chr8	-	6389	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	31.6824107026122	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGAGTCCTTGCTTTT	NA	False	NA	-2	True	TATAAA	-45	NA	41586784	41443950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.30	chr8	-	6041	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-30	-369	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	44.4766047191885	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAATGGCAGCCTCTG	NA	False	NA	-6	True	AATAAA	-19	NA	41586793	41444457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586697
ES.32854.31	chr8	-	5876	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	1	671	1	-533	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGGGTTTTTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	41586762	41444621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.32	chr8	-	4939	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-36	1645	-36	-1507	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGGTTTATTTTTTT	NA	False	NA	6	True	TATAAA	-25	NA	41586799	41445595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.33	chr8	-	2504	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	-57	1517	-57	-1517	multi-exon	FALSE	canonical	3	9	junction_9	37.6133677314165	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATGGATGTTTCTGGT	NA	False	NA	-4	True	TATAAA	-15	NA	41494960	41445605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
ES.32854.34	chr8	-	3436	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-706	-1520	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	39.3547061913602	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCAATGGATGTTTCT	NA	False	NA	-7	True	TATAAA	-12	NA	41536519	41445608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650
ES.32854.35	chr8	-	4425	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-298	-1860	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCCTGTATTAACCAAG	NA	False	NA	1	True	ATTAAA	-20	NA	41587061	41445948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
ES.32854.36	chr8	-	4783	15	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-4243	-1863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	46.0201819081275	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGGCCTGTATTAACC	NA	False	NA	-2	True	ATTAAA	-17	NA	41571947	41445951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41571615
ES.32854.37	chr8	-	4578	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-33	2003	-33	-1865	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTGGCCTGTATTAA	NA	False	NA	-4	True	ATTAAA	-15	NA	41586796	41445953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.38	chr8	-	5586	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	2	-1866	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGCTTGGCCTGTATTA	NA	False	NA	-5	True	ATTAAA	-14	NA	41586761	41445954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.39	chr8	-	4685	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-1867	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGCTTGGCCTGTATT	NA	False	NA	-6	True	ATTAAA	-13	NA	41586755	41445955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.4	chr8	-	6645	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-520	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGAGTCCTTGCTTTT	NA	False	NA	-2	True	TATAAA	-45	NA	41587283	41443950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
ES.32854.40	chr8	-	4354	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	1	-1867	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	31.6824107026122	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGCTTGGCCTGTATT	NA	False	NA	-6	True	ATTAAA	-13	NA	41586754	41445955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.41	chr8	-	5421	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-14	-1867	intron_retention	FALSE	canonical	3	11	junction_12	32.2829289253624	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAGCTTGGCCTGTATT	NA	False	NA	-6	True	ATTAAA	-13	NA	41586777	41445955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.42	chr8	-	4982	18	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-18541	-2000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.3983528120951	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTTCTTGTGATTTTTA	NA	False	NA	-2	True	GATAAA	-34	NA	41605304	41446088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940_41587430_41590725_41590857_41592597_41592689_41603091_41603144_41605249
ES.32854.43	chr8	-	4455	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	-46	2139	-46	-2001	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTTCTTGTGATTTTT	NA	False	NA	-3	True	GATAAA	-33	NA	41586809	41446089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.44	chr8	-	4261	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-29	-2002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.8667918309746	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACCTTCTTGTGATTTT	NA	False	NA	-4	True	GATAAA	-32	NA	41586792	41446090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455337_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.45	chr8	-	4591	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-34	-2003	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACACCTTCTTGTGATTT	NA	False	NA	-5	True	GATAAA	-31	NA	41586797	41446091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.46	chr8	-	2011	10	NNC	ENSMUSG00000045636.17	novel	3964	10	NA	NA	-47	-2004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.5197675527139	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACACCTTCTTGTGATT	NA	False	NA	-6	True	GATAAA	-30	NA	41494950	41446092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452468_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
ES.32854.47	chr8	-	4254	15	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-331	-2004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	46.5719215574258	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACACCTTCTTGTGATT	NA	False	NA	-6	True	GATAAA	-30	NA	41587094	41446092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455337_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41536645_41536708_41537878_41586940
ES.32854.48	chr8	-	5584	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-35	-2006	intron_retention	FALSE	canonical	0	0	junction_3	42.5307407098142	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACACCTTCTTGTGA	NA	False	NA	-8	True	GATAAA	-28	NA	41586798	41446094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452102_41452204_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.5	chr8	-	5292	13	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-1054	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	35.0019840707479	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTGAGTCCTTGCTTT	NA	False	NA	-3	True	TATAAA	-44	NA	41536867	41443951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453796_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650
ES.32854.50	chr8	-	4492	15	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-2019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.0456506037649	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTTCTTCACCAGAGA	NA	False	NA	-21	True	GATAAA	-15	NA	41586763	41446107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452102_41452204_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.51	chr8	-	5393	10	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-38	32	intron_retention	FALSE	canonical	3	90	junction_9	16.2738903207819	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTACATTTAGCTGGC	NA	False	NA	NA	False	AAAAAG	-5	NA	41586801	41451774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.52	chr8	-	4860	3	NIC	ENSMUSG00000045636.17	novel	3964	10	NA	NA	174	27	intron_retention	FALSE	canonical	3	113	junction_2	2.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTTACTTACATTTAG	NA	False	NA	NA	False	NA	NA	NA	41469618	41451779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41452569_41452679_41455557_41468424
ES.32854.53	chr8	-	3503	8	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-23	361	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	33.3142122028103	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTCTCAGTGACACAG	NA	False	NA	NA	False	NA	NA	NA	41586786	41455018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
ES.32854.54	chr8	-	3460	8	NNC	ENSMUSG00000045636.17	novel	2686	4	NA	NA	-49	1088	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.3651506083463	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCTCCAGGTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	41586812	41466324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41466614_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.55	chr8	-	2083	2	ISM	ENSMUSG00000045636.17	ENSMUST00000145860.2	2686	4	0	32904	0	1559	5prime_fragment	FALSE	canonical	3	90	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAATCCCAATTAACAA	NA	False	NA	NA	False	TTTAAA	-13	NA	41586763	41536040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_41537878_41586517
ES.32854.6	chr8	-	7618	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-30	0	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATCTTGAGTCCTTGC	NA	False	NA	-6	True	TATAAA	-41	NA	41586793	41443954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32854.7	chr8	-	4104	12	NIC	ENSMUSG00000045636.17	novel	6426	14	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	36.8147024169636	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATCTTGAGTCCTTGC	NA	False	NA	-6	True	TATAAA	-41	NA	41535750	41443954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650
ES.32854.8	chr8	-	7763	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	15	junction_11	38.5403807291205	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATCTTGAGTCCTTG	NA	False	NA	-7	True	TATAAA	-40	NA	41586789	41443955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
ES.32854.9	chr8	-	8558	12	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	90	junction_11	16.0531143189988	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGAATCTTGAGTCCTT	NA	False	NA	-8	True	TATAAA	-39	NA	41586763	41443956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41446671_41447584_41447683_41451383_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ES.32855.1	chr8	+	6287	1	Intergenic	novelGene_26809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGATTAATTTTTAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	41617256	41623543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41617300_41623500
ES.32856.1	chr8	-	167	1	Intergenic	novelGene_26810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41627358	41627191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41627200_41627400
ES.32857.1	chr8	-	218	1	Intergenic	novelGene_26811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTTTTCCCAGCC	NA	False	NA	NA	False	TTTAAA	-9	NA	41629013	41628795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41628800_41629000
ES.32858.1	chr8	+	6742	39	Fusion	ENSMUSG00000031592.11_ENSMUSG00000085445.2	novel	974	3	NA	NA	-12	-954	multi-exon	TRUE	canonical	0	0	junction_1	53.1915539605902	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41671163	41784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_41671276_41672757_41672982_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.10	chr8	+	6796	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-155	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_37	46.6057865783405	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTGGGAAATGTTGT	NA	False	NA	10	True	AATAAA	-22	NA	41692633	41785383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785025
ES.32858.100	chr8	+	2941	10	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	74795	4	74790	-4	3prime_fragment	FALSE	canonical	3	160	junction_9	29.585198167619	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATGCTTTTGGGAAA	NA	False	NA	4	True	AATAAA	-16	NA	41767604	41785377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.101	chr8	+	2258	6	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	85489	3	85484	-3	intron_retention	FALSE	canonical	3	204	junction_3	16.4996969669143	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41778298	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.102	chr8	+	6131	3	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	86007	509	intron_retention	FALSE	canonical	2	3	junction_1	114.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTTTTGAGATGATAA	NA	False	NA	NA	False	ACTAAA	-45	NA	41778821	41785890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41780948_41781805_41783763_41783842
ES.32858.103	chr8	+	4632	2	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	88072	-1739	88067	1739	intron_retention	FALSE	canonical	3	252	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTGAATTGTATTTT	NA	False	NA	22	True	AATAAA	-14	NA	41780881	41787120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41782063_41783669
ES.32858.104	chr8	+	4026	1	Intergenic	novelGene_26815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTATCTTGTGATTTG	NA	False	NA	NA	False	AAAACA	-8	NA	41786310	41790336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41786300_41790300
ES.32858.11	chr8	+	6721	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-149	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_27	46.3699356014696	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692639	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.12	chr8	+	6832	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-143	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_28	44.9888567304938	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692645	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.13	chr8	+	6748	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-142	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	50.8744426172348	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692646	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757002_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.14	chr8	+	6801	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	45.3723896176098	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692647	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774992_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.15	chr8	+	6786	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-159	-3	-138	3	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGGGAAATGTTGTT	NA	False	NA	11	True	AATAAA	-23	NA	41692650	41785384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.16	chr8	+	2020	10	FSM	ENSMUSG00000031592.11	ENSMUST00000211090.2	2631	10	-131	742	-131	-742	multi-exon	FALSE	canonical	3	93	junction_5	28.3783955383904	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATATTTTAAACTTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	41692657	41727389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136
ES.32858.18	chr8	+	8488	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-118	-1746	-97	1746	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTGTATTTTTATTTAA	NA	False	NA	29	True	AATAAA	-21	NA	41692691	41787127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.19	chr8	+	7441	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-63	-894	-37	642	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCCTTCTGAGTCTG	NA	False	NA	NA	False	AGTAAA	-16	NA	41692751	41786023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.2	chr8	+	6650	39	Fusion	ENSMUSG00000031592.11_ENSMUSG00000085445.2	novel	974	3	NA	NA	-1	2	multi-exon	FALSE	canonical	0	0	junction_1	52.6585983277122	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTGGGAAATGTTGT	NA	False	NA	10	True	AATAAA	-22	NA	41671174	41785383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_41671276_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768959_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.20	chr8	+	6535	37	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-57	1208	-36	-956	5prime_fragment	FALSE	canonical	3	55	junction_5	37.9212960136916	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAATGCTTTATGACT	NA	False	NA	24	True	AATAAA	-18	NA	41692752	41784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.21	chr8	+	6640	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	52.3581948672693	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692773	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733060_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.22	chr8	+	8342	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	1742	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	42.5841838011169	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAATTGTATTTTTAT	NA	False	NA	25	True	AATAAA	-17	NA	41692776	41787123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.23	chr8	+	6643	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	53.0316113328081	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTATGCTTTTGGGAA	NA	False	NA	3	True	AATAAA	-15	NA	41692776	41785376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710932_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741066_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.24	chr8	+	9152	35	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-12	1738	intron_retention	FALSE	non_canonical	0	0	junction_9	56.3321602970898	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTCTGAATTGTATTT	NA	False	NA	21	True	AATAAA	-13	NA	41692776	41787119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728941_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766878_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.25	chr8	+	6522	37	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_28	47.0616469230637	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692776	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.26	chr8	+	8412	36	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	55	junction_5	37.5893601967365	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692776	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.27	chr8	+	6531	37	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-12	-957	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	47.6056006145973	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41692776	41784172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757002_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.28	chr8	+	6801	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_36	43.3594139854707	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692776	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782090_41783669_41783763_41783842_41783958_41785019
ES.32858.29	chr8	+	7047	35	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-12	-951	intron_retention	FALSE	canonical	3	13	junction_21	46.8109371923961	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTATGACTTTTTT	NA	False	NA	29	True	AATAAA	-23	NA	41692776	41784178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.3	chr8	+	6501	36	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-171	-951	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	44.5063994481326	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTATGACTTTTTT	NA	False	NA	29	True	AATAAA	-23	NA	41692617	41784178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.30	chr8	+	6765	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	53.4116468255801	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTATGCTTTTGGGAA	NA	False	NA	3	True	AATAAA	-15	NA	41692776	41785376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41701697_41701811_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.31	chr8	+	9463	37	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-33	-1744	-12	1744	intron_retention	FALSE	canonical	3	55	junction_5	37.9212960136916	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTGTATTTTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	41692776	41787125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.32	chr8	+	8510	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-34	-1992	-8	1740	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTGAATTGTATTTTT	NA	False	NA	23	True	AATAAA	-15	NA	41692780	41787121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.33	chr8	+	6485	37	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_22	46.1350674047892	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692783	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.35	chr8	+	6694	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-4	34629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	51.830963269677	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGTCACTATATGTG	NA	False	NA	NA	False	NA	NA	NA	41692784	41820010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782090_41783669_41783763_41783842_41783958_41785019_41785377_41819987
ES.32858.36	chr8	+	6450	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-3	-951	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	43.1137867869561	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTATGACTTTTTT	NA	False	NA	29	True	AATAAA	-23	NA	41692785	41784178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.37	chr8	+	6475	37	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-2	-961	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_35	51.0826007439464	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAACACTAATGCTTTA	NA	False	NA	19	True	AATAAA	-13	NA	41692786	41784168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782090_41783669_41783763_41783842
ES.32858.38	chr8	+	7655	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-2	3	intron_retention	FALSE	canonical	3	32	junction_10	43.1137867869561	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGGGAAATGTTGTT	NA	False	NA	11	True	AATAAA	-23	NA	41692786	41785384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.39	chr8	+	6781	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	45.6189504773979	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692787	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757002_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.4	chr8	+	6935	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-196	-255	-170	3	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGGGAAATGTTGTT	NA	False	NA	11	True	AATAAA	-23	NA	41692618	41785384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.40	chr8	+	6637	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_34	46.5237751138064	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692787	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780631_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.41	chr8	+	6601	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_27	45.922887695756	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692787	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.43	chr8	+	6397	37	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-1	-957	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_29	47.3468942493774	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41692787	41784172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774992_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.44	chr8	+	6472	37	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	52.4265726964042	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692787	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783964_41785025
ES.32858.45	chr8	+	6666	39	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	43.7968743746189	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTGGGAAATGTTGT	NA	False	NA	10	True	AATAAA	-22	NA	41692787	41785383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.46	chr8	+	6518	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-27	-7	-1	7	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAGTTTGACACTG	NA	False	NA	NA	False	AATAAA	-24	NA	41692787	41785136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.47	chr8	+	7281	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	1740	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_38	45.6313437133498	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTGAATTGTATTTTT	NA	False	NA	23	True	AATAAA	-15	NA	41692787	41787121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41786241
ES.32858.48	chr8	+	6456	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-952	combination_of_known_splicesites	FALSE	canonical	3	13	junction_23	45.3180802225969	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGCTTTATGACTTTTT	NA	False	NA	28	True	AATAAA	-22	NA	41692787	41784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.49	chr8	+	6546	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	-957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1811298968311	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41692787	41784172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41705807_41705903_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.5	chr8	+	6758	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-170	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	42.5841838011169	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692618	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.50	chr8	+	7210	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-1	644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	58.4342575408145	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTCTGAGTCTGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	41692787	41786025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782047_41783669_41783763_41783842_41783964_41785019
ES.32858.51	chr8	+	6419	39	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	7	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	43.7968743746189	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATTAGTTTGACACTG	NA	False	NA	NA	False	AATAAA	-24	NA	41692787	41785136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.52	chr8	+	6649	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.7407787052767	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTTGGGAAATGTTG	NA	False	NA	9	True	AATAAA	-21	NA	41692787	41785382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710942_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.53	chr8	+	6607	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	62.3865230225859	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATGCTTTTGGGAAA	NA	False	NA	4	True	AATAAA	-16	NA	41692788	41785377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41701697_41701811_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.55	chr8	+	7712	36	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	1	-4	intron_retention	FALSE	canonical	2	6	junction_27	46.4845816000382	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATGCTTTTGGGAAA	NA	False	NA	4	True	AATAAA	-16	NA	41692789	41785377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669
ES.32858.56	chr8	+	6596	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_23	44.7422616559131	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692789	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.57	chr8	+	6548	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	50.9885763284001	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692789	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743796_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.58	chr8	+	6517	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	2	-954	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	44.3412953667247	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41692790	41784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.59	chr8	+	6559	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	51.3760240275106	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692790	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774992_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.6	chr8	+	6573	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-191	242	-170	10	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTTTGACACTGCAT	NA	False	NA	NA	False	AATAAA	-27	NA	41692618	41785139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.60	chr8	+	6496	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_23	51.0261108483944	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692790	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712172_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.62	chr8	+	6591	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-6	-956	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.0886192107096	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAATGCTTTATGACT	NA	False	NA	24	True	AATAAA	-18	NA	41692795	41784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710826_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782051_41783676_41783763_41783842
ES.32858.63	chr8	+	6272	36	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-6	-954	combination_of_known_splicesites	FALSE	canonical	3	13	junction_22	50.9432978107693	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41692795	41784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.64	chr8	+	6221	37	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	10	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	43.9489304494924	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGTTTGACACTGCAT	NA	False	NA	NA	False	AATAAA	-27	NA	41692796	41785139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.65	chr8	+	6723	36	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	4	junction_11	47.9951017908949	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41692796	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.66	chr8	+	6355	36	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	-957	combination_of_known_splicesites	FALSE	canonical	1	2	junction_28	47.6968659390548	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41692796	41784172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.67	chr8	+	6741	39	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53.0093873984087	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692796	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710834_41711074_41712073_41712338_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.68	chr8	+	6985	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-18	-483	-5	231	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTCTTAGAACATGT	NA	False	NA	NA	False	AATAAA	-12	NA	41692796	41785612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.69	chr8	+	9386	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-5	1744	intron_retention	FALSE	canonical	3	32	junction_10	43.1137867869561	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTGTATTTTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	41692796	41787125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.7	chr8	+	6783	38	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-192	955	-166	-955	5prime_fragment	FALSE	canonical	3	93	junction_5	36.5724712558759	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAATGCTTTATGACTT	NA	False	NA	25	True	AATAAA	-19	NA	41692622	41784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.70	chr8	+	6435	37	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.0303536736294	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692796	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727308_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.72	chr8	+	6572	38	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	50.90679548106	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692796	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741184_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.73	chr8	+	6625	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.9568441815009	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGGGAAATGTTGTT	NA	False	NA	11	True	AATAAA	-23	NA	41692797	41785384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709046_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.74	chr8	+	6620	38	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.1299898009892	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692798	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735743_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.75	chr8	+	8329	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	-2	1743	combination_of_known_splicesites	FALSE	canonical	3	13	junction_23	44.7422616559131	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATTGTATTTTTATT	NA	False	NA	26	True	AATAAA	-18	NA	41692799	41787124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.76	chr8	+	8112	37	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	80	1738	combination_of_known_splicesites	FALSE	canonical	3	13	junction_22	46.1350674047892	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTCTGAATTGTATTT	NA	False	NA	21	True	AATAAA	-13	NA	41692894	41787119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.77	chr8	+	8422	39	NNC	ENSMUSG00000031592.11	novel	2631	10	NA	NA	291	1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.5982774739053	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAATTGTATTTTTAT	NA	False	NA	25	True	AATAAA	-17	NA	41693105	41787123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41693236_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.78	chr8	+	6330	37	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	16240	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	46.5178430521259	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41709054	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.79	chr8	+	6396	35	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	18012	-3	intron_retention	FALSE	canonical	3	55	junction_3	37.5162825088947	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41710826	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783958_41785019
ES.32858.8	chr8	+	7864	37	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	-178	0	-157	0	intron_retention	FALSE	canonical	3	55	junction_5	37.9212960136916	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692631	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.80	chr8	+	6199	36	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	18075	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_35	53.5963751439538	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41710889	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785025
ES.32858.81	chr8	+	5676	33	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	18182	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	49.9063869753912	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41710996	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.82	chr8	+	6093	36	NNC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	19378	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.1302667170081	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41712192	41785381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741215_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.83	chr8	+	6384	33	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	19499	-954	intron_retention	FALSE	canonical	3	55	junction_2	38.2269129671754	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAATGCTTTATGACTTT	NA	False	NA	26	True	AATAAA	-20	NA	41712313	41784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.84	chr8	+	7487	34	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	21230	1739	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	43.8082054110948	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTGAATTGTATTTT	NA	False	NA	22	True	AATAAA	-14	NA	41714044	41787120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.85	chr8	+	5607	33	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	21305	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_26	52.7834239487171	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41714119	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.86	chr8	+	5392	32	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	21601	-956	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	47.2156916719689	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAATGCTTTATGACT	NA	False	NA	24	True	AATAAA	-18	NA	41714415	41784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.87	chr8	+	5984	28	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	32519	-3	intron_retention	FALSE	canonical	1	1	junction_7	54.8555904395271	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41725333	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.89	chr8	+	4975	29	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	34354	-956	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_27	45.0514445169211	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTAATGCTTTATGACT	NA	False	NA	24	True	AATAAA	-18	NA	41727168	41784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782090_41783669_41783763_41783842
ES.32858.9	chr8	+	7981	38	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	-182	-253	-156	1	intron_retention	FALSE	canonical	3	93	junction_5	36.5724712558759	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTTGGGAAATGTTG	NA	False	NA	9	True	AATAAA	-21	NA	41692632	41785382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.90	chr8	+	5077	27	ISM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	34393	2475	34393	-2475	internal_fragment	FALSE	canonical	3	106	junction_5	30.0080856953687	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTCTGAACCTTGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	41727207	41782654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805
ES.32858.91	chr8	+	4535	27	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	35875	-958	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	47.0282082038419	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACACTAATGCTTTATGA	NA	False	NA	22	True	AATAAA	-16	NA	41728689	41784171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.92	chr8	+	7325	26	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	35940	1740	intron_retention	FALSE	canonical	3	13	junction_12	46.1251514902661	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTGAATTGTATTTTT	NA	False	NA	23	True	AATAAA	-15	NA	41728754	41787121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32858.93	chr8	+	5586	24	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	36289	-957	intron_retention	FALSE	canonical	0	0	junction_2	47.1174376431562	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAATGCTTTATGAC	NA	False	NA	23	True	AATAAA	-17	NA	41729103	41784172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41729190_41732787_41732931_41733031_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41782063_41783669
ES.32858.94	chr8	+	4230	26	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	40260	34629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	46.578518653989	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGTCACTATATGTG	NA	False	NA	NA	False	NA	NA	NA	41733074	41820010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019_41785377_41819987
ES.32858.95	chr8	+	4172	23	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	43788	231	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	48.6704426060733	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTCTTAGAACATGT	NA	False	NA	NA	False	AATAAA	-12	NA	41736602	41785612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780631_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.96	chr8	+	3079	5	NIC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	47927	-25920	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	81.628349854692	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTAGTGTATCACTGTGG	NA	False	NA	NA	False	NA	NA	NA	41740741	41759209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_41740939_41741045_41741192_41741667_41741859_41746494_41746854_41757023
ES.32858.97	chr8	+	4127	16	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	64332	1743	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	55.6925688240561	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATTGTATTTTTATT	NA	False	NA	26	True	AATAAA	-18	NA	41757146	41787124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782090_41783669_41783763_41783842_41783958_41785019
ES.32858.98	chr8	+	3912	13	NNC	ENSMUSG00000031592.11	novel	6624	38	NA	NA	70405	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	62.5221627371713	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCTTTTGGGAAAT	NA	False	NA	5	True	AATAAA	-17	NA	41763219	41785378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_41765316_41766338_41766498_41766951_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ES.32858.99	chr8	+	3505	11	ISM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	73620	-645	73615	645	intron_retention	FALSE	canonical	3	172	junction_3	22.8333090024201	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTTCTGAGTCTGTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	41766429	41786026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842
ES.32859.1	chr8	-	193	1	Intergenic	novelGene_26812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATATTTTCCAAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	41713275	41713082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41713100_41713300
ES.3286.1	chr10	+	6790	47	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	-47	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	12.6314637012618	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGGCTGAGTTTGTG	5963	False	NA	12	True	AATAAA	-21	NA	79832280	79851408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845891_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.10	chr10	+	8087	44	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_1	13.2007423951711	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6012	False	NA	8	True	AATAAA	-17	NA	79832329	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79832525_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834322_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.11	chr10	+	7919	43	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	4	2	intron_retention	FALSE	canonical	0	0	junction_3	13.3683214406518	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6014	False	NA	8	True	AATAAA	-17	NA	79832331	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833830_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845816_79845984_79847015_79847108_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.12	chr10	+	6723	45	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	13	1	intron_retention	FALSE	canonical	1	1	junction_13	12.9711018603307	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCCACGGCTGAGT	6023	False	NA	7	True	AATAAA	-16	NA	79832340	79851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79837914_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.13	chr10	+	7155	44	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	55	2	intron_retention	FALSE	canonical	0	0	junction_36	13.0870943658234	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6065	False	NA	8	True	AATAAA	-17	NA	79832382	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847692_79847940_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.14	chr10	+	6805	46	FSM	ENSMUSG00000035722.16	ENSMUST00000171637.8	6638	46	-150	-17	-150	2	multi-exon	FALSE	canonical	3	12	junction_11	11.8630872670723	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6942	False	NA	8	True	AATAAA	-17	NA	79833259	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.15	chr10	+	6740	46	FSM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	-146	-4	-107	0	multi-exon	FALSE	canonical	3	7	junction_25	12.2237574793343	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	6985	False	NA	10	True	AATAAA	-19	NA	79833302	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.16	chr10	+	5640	24	NIC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	1165	-4792	intron_retention	FALSE	canonical	3	12	junction_6	6.79819836024072	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAAATATTTAAAAGG	8296	False	NA	NA	False	NA	NA	NA	79834613	79846595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840928_79841476_79841615_79841821_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984
ES.3286.17	chr10	+	5784	39	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	2089	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.8211919878348	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	9220	False	NA	10	True	AATAAA	-19	NA	79835537	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840582_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.18	chr10	+	6143	34	NIC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	3224	2	intron_retention	FALSE	canonical	3	12	junction_2	12.1022579077066	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	NA	False	NA	8	True	AATAAA	-17	NA	79836672	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79836925_79837323_79837554_79837868_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.19	chr10	+	6601	31	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	3425	-6	intron_retention	FALSE	canonical	2	7	junction_16	12.8482164780434	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGAAACTAGAAT	NA	False	NA	-15	True	NA	NA	NA	79836873	79851381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79836925_79837323_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.2	chr10	+	6755	47	NIC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	-31	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	11.8955758960178	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGGCTGAGTTTGTGTT	5979	False	NA	14	True	AATAAA	-23	NA	79832296	79851410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.20	chr10	+	6112	31	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	4146	2	intron_retention	FALSE	canonical	0	0	junction_12	13.896002622657	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	NA	False	NA	8	True	AATAAA	-17	NA	79837594	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79843101_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850263_79850395_79850780_79851022_79851139
ES.3286.21	chr10	+	5127	32	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	4794	2	intron_retention	FALSE	canonical	0	0	junction_12	13.2974456326694	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	NA	False	NA	8	True	AATAAA	-17	NA	79838242	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79843101_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.22	chr10	+	5703	28	NIC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	4892	2	intron_retention	FALSE	canonical	3	18	junction_7	12.1382073148204	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	NA	False	NA	8	True	AATAAA	-17	NA	79838340	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79848021_79849145_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.23	chr10	+	5332	29	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	5283	0	intron_retention	FALSE	canonical	0	0	junction_7	13.6581346770759	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	NA	False	NA	10	True	AATAAA	-19	NA	79838731	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841863_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.24	chr10	+	4711	32	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	5367	1	intron_retention	FALSE	canonical	1	2	junction_21	12.8739183294351	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCCACGGCTGAGT	NA	False	NA	7	True	AATAAA	-16	NA	79838815	79851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846916_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850395_79850780_79851022_79851139
ES.3286.25	chr10	+	4318	30	NNC	ENSMUSG00000035722.16	novel	6590	46	NA	NA	6235	0	intron_retention	FALSE	canonical	0	0	junction_17	13.4327053982543	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGGCCACGGCTGAG	NA	False	NA	6	True	AATAAA	-15	NA	79839683	79851402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845816_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.26	chr10	+	3854	27	NNC	ENSMUSG00000035722.16	novel	6590	46	NA	NA	7896	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	15.2389740914849	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACGGCTGAGTTTGTG	449	False	NA	12	True	AATAAA	-21	NA	79841344	79851408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845816_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.27	chr10	+	4107	26	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	7939	2	intron_retention	FALSE	canonical	0	0	junction_19	13.7956514887844	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	492	False	NA	8	True	AATAAA	-17	NA	79841387	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847940_79848021_79849145_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.28	chr10	+	4898	21	NIC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	7968	2	intron_retention	FALSE	canonical	3	18	junction_2	10.7213571902068	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	521	False	NA	8	True	AATAAA	-17	NA	79841416	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847870_79847957_79848021_79849145_79850167_79850301_79850395_79850780
ES.3286.29	chr10	+	3929	26	NIC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	7970	1	intron_retention	FALSE	canonical	3	18	junction_2	11.8243139335862	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCCACGGCTGAGT	523	False	NA	7	True	AATAAA	-16	NA	79841418	79851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.3	chr10	+	7496	43	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	-23	-1	intron_retention	FALSE	canonical	0	0	junction_24	13.0465979788166	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCCACGGCTGAGTTT	5987	False	NA	9	True	AATAAA	-18	NA	79832304	79851405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842759_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.30	chr10	+	3809	25	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	8002	2	intron_retention	FALSE	canonical	0	0	junction_18	14.4807702948888	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	555	False	NA	8	True	AATAAA	-17	NA	79841450	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846916_79847015_79847108_79847233_79847546_79847692_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850395_79850780_79851022_79851139
ES.3286.31	chr10	+	3818	27	ISM	ENSMUSG00000035722.16	ENSMUST00000171637.8	6638	46	8050	-17	8011	2	3prime_fragment	FALSE	canonical	3	18	junction_2	12.0384615384615	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	564	False	NA	8	True	AATAAA	-17	NA	79841459	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.32	chr10	+	3124	22	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	9047	2	intron_retention	FALSE	canonical	0	0	junction_13	15.0400825008593	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	1600	False	NA	8	True	AATAAA	-17	NA	79842495	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.33	chr10	+	3046	24	NNC	ENSMUSG00000035722.16	novel	6590	46	NA	NA	9055	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.8696923462656	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCCACGGCTGAGT	1608	False	NA	7	True	AATAAA	-16	NA	79842503	79851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79842545_79842719_79842757_79842969_79843063_79843219_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846916_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.34	chr10	+	2958	21	NNC	ENSMUSG00000035722.16	novel	6590	46	NA	NA	9749	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.6827931185743	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCCACGGCTGAGT	2302	False	NA	7	True	AATAAA	-16	NA	79843197	79851403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846916_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849391_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.35	chr10	+	3203	19	NNC	ENSMUSG00000035722.16	novel	6638	46	NA	NA	9821	-9	intron_retention	FALSE	canonical	0	0	junction_1	16.1493798374985	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAATAAAAAGAAACTAG	2374	False	NA	-18	True	NA	NA	NA	79843269	79851378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79843286_79843556_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79846101_79846869_79847015_79847108_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850391_79850780_79851022_79851139
ES.3286.36	chr10	+	3722	13	NIC	ENSMUSG00000035722.16	novel	6590	46	NA	NA	10139	2	intron_retention	FALSE	canonical	3	28	junction_5	12.1025708930881	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	2692	False	NA	8	True	AATAAA	-17	NA	79843587	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79843613_79843696_79843796_79843978_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79848021_79849145_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.37	chr10	+	4824	2	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	13038	-2	13038	2	intron_retention	FALSE	canonical	3	35	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	5591	False	NA	8	True	AATAAA	-17	NA	79846486	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79847015_79847108
ES.3286.38	chr10	+	580	3	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	17039	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGGCCACGGCTGAG	9592	False	NA	6	True	AATAAA	-15	NA	79850487	79851402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79850564_79850780_79851022_79851139
ES.3286.39	chr10	+	797	2	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	17042	-3	17042	-1	3prime_fragment	FALSE	canonical	3	70	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCCACGGCTGAGTTT	9595	False	NA	9	True	AATAAA	-18	NA	79850490	79851405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79851022_79851139
ES.3286.4	chr10	+	6652	47	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	12.9454285747126	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	6000	False	NA	10	True	AATAAA	-19	NA	79832317	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845816_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.5	chr10	+	7084	44	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	1	2	intron_retention	FALSE	canonical	2	7	junction_29	12.2318949329457	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6011	False	NA	8	True	AATAAA	-17	NA	79832328	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.6	chr10	+	7099	45	NIC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	1	-2	intron_retention	FALSE	canonical	3	13	junction_4	11.7707746713475	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATGAGGCCACGGCTG	6011	False	NA	4	True	AATAAA	-13	NA	79832328	79851400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.7	chr10	+	7324	45	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_29	12.1513144206197	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	6011	False	NA	10	True	AATAAA	-19	NA	79832328	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844401_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.8	chr10	+	6693	47	FSM	ENSMUSG00000035722.16	ENSMUST00000132517.8	6696	47	1	2	1	2	multi-exon	FALSE	canonical	3	7	junction_26	12.2414276938957	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCCACGGCTGAGTT	6011	False	NA	8	True	AATAAA	-17	NA	79832328	79851404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ES.3286.9	chr10	+	6800	46	NNC	ENSMUSG00000035722.16	novel	6696	47	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_34	12.0281562681018	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACGGCTGAGTTTG	6011	False	NA	10	True	AATAAA	-19	NA	79832328	79851406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845816_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850395_79850780_79851022_79851139
ES.32860.1	chr8	-	178	1	Intergenic	novelGene_26813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41761665	41761487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41761500_41761700
ES.32861.1	chr8	-	2714	1	Antisense	novelGene_ENSMUSG00000031592.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41775658	41772944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_41772900_41775700
ES.32862.1	chr8	-	216	1	Intergenic	novelGene_26814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTCCCTTTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	41783224	41783008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41783000_41783200
ES.32863.1	chr8	-	2350	1	Intergenic	novelGene_26816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTATGATATACATTT	NA	False	NA	NA	False	AATAAA	-15	NA	41789474	41787124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41787100_41789500
ES.32863.2	chr8	-	3552	1	Intergenic	novelGene_26817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACTTTTAGTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	41792599	41789047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41789000_41792600
ES.32864.1	chr8	-	3079	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	106	-412	-32	412	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCCTCAAACTTGTGA	7607	False	NA	NA	False	NA	NA	NA	41827704	41792821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.12	chr8	-	2871	13	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	24	-2	intron_retention	FALSE	canonical	3	999	junction_6	172.755828813065	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGCAGTCATGCATGC	7663	False	NA	-23	True	AATAAA	-16	NA	41827648	41793699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807955_41813289_41813337_41827546
ES.32864.15	chr8	-	2154	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	364.031811471626	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGCAGTCATGCATGC	7648	False	NA	-23	True	AATAAA	-16	NA	41827663	41793699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807949_41813289_41813337_41827546
ES.32864.16	chr8	-	2894	16	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	557.426587094659	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGCAGTCATGCATGC	7630	False	NA	-23	True	AATAAA	-16	NA	41827681	41793699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41819129_41819598_41819714_41819963_41827546
ES.32864.17	chr8	-	2998	13	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-13	-2	intron_retention	FALSE	canonical	1	2	junction_6	401.780792915186	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGCAGTCATGCATGC	7626	False	NA	-23	True	AATAAA	-16	NA	41827685	41793699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799877_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807955_41813289_41813337_41827546
ES.32864.2	chr8	-	2744	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	-5	34	-5	-34	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATCAAAATAATAAAAAT	7496	False	NA	NA	False	NA	NA	NA	41827815	41793267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.21	chr8	-	2182	13	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	30	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	374.074738150309	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTCAGCAGTCATGC	7531	False	NA	-27	True	AATAAA	-12	NA	41827780	41793703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41813289_41813337_41827546
ES.32864.23	chr8	-	2189	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	394.070383885444	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTCAGCAGTCATGC	7635	False	NA	-27	True	AATAAA	-12	NA	41827676	41793703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827526
ES.32864.24	chr8	-	2133	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	515.95072238441	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTCAGCAGTCATGC	7626	False	NA	-27	True	AATAAA	-12	NA	41827685	41793703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799201_41799353_41799388_41799967_41800113_41801124_41801172_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.25	chr8	-	2353	15	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	496.454120616952	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTCAGCAGTCATGC	7629	False	NA	-27	True	AATAAA	-12	NA	41827682	41793703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41806073_41806252_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.26	chr8	-	2113	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	396.145944656077	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTCAGCAGTCATGC	7607	False	NA	-27	True	AATAAA	-12	NA	41827704	41793703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796596_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.27	chr8	-	2068	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	107	598	-31	-134	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAACTTGTTCATCTT	7608	False	NA	NA	False	AATATA	-43	NA	41827703	41793831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.28	chr8	-	1923	12	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-16	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	589.484114002368	652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAGAACTTGTTCATC	7623	False	NA	NA	False	AATATA	-41	NA	41827688	41793833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801169_41802586_41802662_41807050_41807138_41807863_41807955_41827546
ES.32864.3	chr8	-	2307	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	16	450	16	14	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGACTGGGTGTGTGCC	7517	False	NA	-7	True	AATAAA	-32	NA	41827794	41793683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.30	chr8	-	1803	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	162	808	24	305	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATAAGTGTTCT	7663	False	NA	NA	False	TATAAA	-28	NA	41827648	41794041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.31	chr8	-	1366	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	35	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	394.070383885444	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTTGTTTGTT	7674	False	NA	-11	True	NA	NA	NA	41827637	41794487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827526
ES.32864.32	chr8	-	1504	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	15	1254	15	-141	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTTGTTTGTT	7516	False	NA	-11	True	NA	NA	NA	41827795	41794487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.34	chr8	-	1038	9	ISM	ENSMUSG00000031591.15	ENSMUST00000110417.8	764	10	14353	-421	-10245	421	3prime_fragment	FALSE	canonical	3	999	junction_2	212.872027284	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTAGAAGTTGCAGT	NA	False	NA	NA	False	AGTAAA	-19	NA	41813319	41798795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289
ES.32864.35	chr8	-	1083	1	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-4647	425	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTATTCTGTGGAGT	NA	False	NA	NA	False	AATAAA	-23	NA	41807721	41806638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41806600_41807700
ES.32864.36	chr8	-	437	3	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-6	-4888	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	710.5	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTATGTGTGTGTGTG	7633	False	NA	NA	False	TATAAA	-45	NA	41827678	41811951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41812210_41813289_41813337_41827546
ES.32864.4	chr8	-	2796	13	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-31	14	intron_retention	FALSE	canonical	3	1166	junction_7	142.956189870261	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGACTGGGTGTGTGCC	7608	False	NA	-7	True	AATAAA	-32	NA	41827703	41793683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.6	chr8	-	2177	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-7	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	396.231194838712	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGCTGACTGGGTGTG	7632	False	NA	-11	True	AATAAA	-28	NA	41827679	41793687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796888_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32864.7	chr8	-	2147	13	NIC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-13	10	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	375.73685938433	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGCTGACTGGGTGTG	7626	False	NA	-11	True	AATAAA	-28	NA	41827685	41793687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41827546
ES.32864.8	chr8	-	2219	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-19	10	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_11	385.543296059074	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGCTGACTGGGTGTG	7620	False	NA	-11	True	AATAAA	-28	NA	41827691	41793687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807157_41807863_41807955_41813289_41813337_41827546
ES.32864.9	chr8	-	3308	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	390.982558366413	654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGCATGCTGACTGGG	7626	False	NA	-15	True	AATAAA	-24	NA	41827685	41793691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41801468_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ES.32865.1	chr8	+	1061	1	Intergenic	novelGene_26818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAACAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	41827873	41828934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41827900_41828900
ES.32866.1	chr8	+	5925	1	Intergenic	novelGene_26819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCGTGTCAAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	41844265	41850190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_41844300_41850200
ES.32867.1	chr8	-	3368	1	Intergenic	novelGene_26820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTACCTGAAATCCCAGC	NA	False	NA	NA	False	ATTAAA	-31	NA	41849634	41846266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41846300_41849600
ES.32868.1	chr8	-	1340	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-15	-286	-15	286	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGACACGCTTCCT	NA	False	NA	NA	False	TATAAA	-14	NA	41870126	41850209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ES.32868.2	chr8	-	1097	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	-54	-4	-54	4	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCGAGTCCTTTTGAA	NA	False	NA	-3	True	AATAAA	-27	NA	41870165	41850491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ES.32868.4	chr8	-	1547	8	NIC	ENSMUSG00000031590.9	novel	1039	9	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	814	junction_1	88.1066144520608	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGAGTTCTCGAGTCC	NA	False	NA	-10	True	AATAAA	-20	NA	41870124	41850498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_41850682_41851992_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ES.32868.5	chr8	-	4825	9	NNC	ENSMUSG00000031590.9	novel	1039	9	NA	NA	-36	-8	intron_retention	FALSE	canonical	0	0	junction_7	411.977244517218	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTACAGAGTTCTCG	NA	False	NA	-15	True	AATAAA	-15	NA	41870147	41850503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41867414_41867839_41868641_41869936
ES.32869.1	chr8	-	168	1	Intergenic	novelGene_26821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAAATTT	NA	False	NA	NA	False	NA	NA	NA	41872226	41872058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_41872100_41872200
ES.3287.1	chr10	+	3915	23	FSM	ENSMUSG00000035697.15	ENSMUST00000099501.10	3948	23	32	1	32	-1	multi-exon	TRUE	canonical	1	1	junction_1	23.4611072568839	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGATCTTGTTCTTTTG	NA	False	NA	15	True	AATAAA	-20	NA	79852518	79867305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.10	chr10	+	3779	19	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-5	1	intron_retention	FALSE	canonical	3	46	junction_7	16.7748341788643	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	815	False	NA	14	True	AATAAA	-19	NA	79855481	79867304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.12	chr10	+	4691	20	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	46	junction_7	14.8331439912387	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	822	False	NA	13	True	AATAAA	-18	NA	79855488	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79866211_79866565
ES.3287.13	chr10	+	3611	21	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	2	-1	intron_retention	FALSE	canonical	3	46	junction_6	15.5495176774072	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGATCTTGTTCTTTTG	822	False	NA	15	True	AATAAA	-20	NA	79855488	79867305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.16	chr10	+	3447	22	NNC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	23.7117994489363	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCACAGCCCGATCTT	838	False	NA	6	True	AATAAA	-11	NA	79855504	79867296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863783_79864490_79864718_79864806_79865018_79866140_79866211_79866565
ES.3287.17	chr10	+	3540	21	NNC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	43	0	intron_retention	FALSE	canonical	0	0	junction_3	21.7473561611521	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	863	False	NA	12	True	AATAAA	-17	NA	79855529	79867302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79855633_79856523_79856668_79856784_79856866_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.18	chr10	+	3470	22	NNC	ENSMUSG00000035697.15	novel	2980	15	NA	NA	215	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.2325425156293	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACAGCCCGATCTTGTT	1035	False	NA	9	True	AATAAA	-14	NA	79855701	79867299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79855822_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.19	chr10	+	3384	15	NIC	ENSMUSG00000035697.15	novel	3970	22	NA	NA	70	-1	intron_retention	FALSE	canonical	3	46	junction_1	17.1124730735764	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCCCGATCTTGTTCT	2980	False	NA	11	True	AATAAA	-16	NA	79857646	79867301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79857694_79857910_79858022_79858108_79858190_79860496_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.2	chr10	+	3707	22	NIC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	-42	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	26.513505735654	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACAGCCCGATCTTGT	NA	False	NA	8	True	AATAAA	-13	NA	79852530	79867298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.20	chr10	+	2673	14	ISM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	2620	-1	530	0	3prime_fragment	FALSE	canonical	3	48	junction_1	15.3071124745228	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	3440	False	NA	13	True	AATAAA	-18	NA	79858106	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.21	chr10	+	2407	12	NNC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	3940	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.2653339707501	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCCCGATCTTGTTCT	2071	False	NA	11	True	AATAAA	-16	NA	79861516	79867301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79861663_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.22	chr10	+	2295	11	NNC	ENSMUSG00000035697.15	novel	3970	22	NA	NA	4397	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	26.8819642139484	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	287	False	NA	13	True	AATAAA	-18	NA	79861973	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79862181_79862266_79862392_79862490_79862585_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.23	chr10	+	1586	6	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	5794	0	5794	0	3prime_fragment	FALSE	canonical	3	69	junction_1	15.9298462013919	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCACAGCCCGATCTT	1684	False	NA	6	True	AATAAA	-11	NA	79863370	79867296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.24	chr10	+	1534	5	NIC	ENSMUSG00000035697.15	novel	2980	15	NA	NA	5948	-1	intron_retention	FALSE	canonical	3	70	junction_1	14.9916643505649	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGATCTTGTTCTTTTG	1838	False	NA	15	True	AATAAA	-20	NA	79863524	79867305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.25	chr10	+	1329	5	NNC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	6492	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	42.2936165396151	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	2382	False	NA	13	True	AATAAA	-18	NA	79864068	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79864134_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.26	chr10	+	1410	5	NNC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	6666	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	39.7617907041421	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	2556	False	NA	13	True	AATAAA	-18	NA	79864242	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79864389_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.27	chr10	+	1375	4	ISM	ENSMUSG00000035697.15	ENSMUST00000150022.2	2980	15	6803	-7	6803	0	3prime_fragment	FALSE	canonical	3	84	junction_1	10.6249183003395	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	2693	False	NA	13	True	AATAAA	-18	NA	79864379	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.28	chr10	+	1311	4	NNC	ENSMUSG00000035697.15	novel	3970	22	NA	NA	6804	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	45.5655815525515	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	2694	False	NA	13	True	AATAAA	-18	NA	79864380	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79864718_79864806_79865018_79866185_79866211_79866565
ES.3287.3	chr10	+	3972	22	NIC	ENSMUSG00000035697.15	novel	3948	23	NA	NA	-24	1	intron_retention	FALSE	canonical	1	1	junction_1	24.0105796787153	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCGATCTTGTTCTTTT	NA	False	NA	14	True	AATAAA	-19	NA	79852548	79867304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.4	chr10	+	950	2	ISM	ENSMUSG00000035697.15	ENSMUST00000140974.8	3970	22	-15	12935	-15	-12928	5prime_fragment	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79852557	79854368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79852753_79853613
ES.3287.5	chr10	+	3533	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	-31	-3	-31	-1	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGATCTTGTTCTTTTG	789	False	NA	15	True	AATAAA	-20	NA	79855455	79867305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.6	chr10	+	3331	21	NNC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.9749374373591	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTGCCACAGCCCGATC	793	False	NA	4	True	AATAAA	-9	NA	79855459	79867294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861383_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.7	chr10	+	2429	6	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-23	-7899	intron_retention	FALSE	canonical	3	46	junction_5	6.71118469422501	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	797	False	NA	NA	False	NA	NA	NA	79855463	79859397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857694_79857910
ES.3287.8	chr10	+	3603	21	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-13	0	intron_retention	FALSE	canonical	3	46	junction_6	15.5495176774072	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCGATCTTGTTCTTT	807	False	NA	13	True	AATAAA	-18	NA	79855473	79867303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.3287.9	chr10	+	3387	21	NIC	ENSMUSG00000035697.15	novel	3499	22	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	21.1775234623881	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCACAGCCCGATCTT	815	False	NA	6	True	AATAAA	-11	NA	79855481	79867296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ES.32870.1	chr8	-	166	1	Intergenic	novelGene_26822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGATTCAGTG	NA	False	NA	NA	False	NA	NA	NA	42989137	42988971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_42989000_42989100
ES.32871.1	chr8	+	4031	1	Intergenic	novelGene_26823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATTAAGATGAGCAAT	NA	False	NA	NA	False	AATAAA	-14	NA	43001997	43006028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43002000_43006000
ES.32872.1	chr8	-	3846	2	Intergenic	novelGene_26824	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATCAGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	43118081	43112207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_43115861_43117888
ES.32873.1	chr8	+	213	1	Intergenic	novelGene_26825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTATTCTATCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	43356250	43356463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43356200_43356500
ES.32874.1	chr8	+	1372	1	Intergenic	novelGene_26826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	43552255	43553627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43552300_43553600
ES.32875.1	chr8	+	2071	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-2347	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	167.155569380742	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTCTCTGCATGTGT	NA	False	NA	23	True	AATAAA	-14	NA	43631230	43646920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43631387_43633200_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.11	chr8	+	1238	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	165.568528108454	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633546	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239_43646446_43646775
ES.32875.12	chr8	+	1466	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	193.176444963895	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633551	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.13	chr8	+	3926	6	NIC	ENSMUSG00000091490.4	novel	1395	7	NA	NA	-21	1	intron_retention	FALSE	canonical	3	6	junction_3	201.027958254567	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633556	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43636403_43636739_43636836_43638315_43638496_43643105_43643129_43643305_43643407_43646239
ES.32875.14	chr8	+	7568	6	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-20	3	intron_retention	FALSE	canonical	3	24	junction_2	225.222201392314	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633557	43646921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43643129_43643305_43643407_43646239
ES.32875.15	chr8	+	3913	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-19	1	intron_retention	FALSE	canonical	3	424	junction_1	51.9853077534626	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633558	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43643129_43643305_43643407_43646239
ES.32875.16	chr8	+	3610	7	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-9	1	intron_retention	FALSE	canonical	3	12	junction_3	186.890044916493	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633568	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640023_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.17	chr8	+	5379	6	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	424	junction_1	52.3335456471277	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGCTCTCTGCATG	NA	False	NA	20	True	AATAAA	-11	NA	43633570	43646917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640607_43643129_43643305_43643407_43646239
ES.32875.2	chr8	+	2465	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-2254	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.980889694357	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43631323	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43631387_43633295_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640023_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.20	chr8	+	1401	7	FSM	ENSMUSG00000091490.4	ENSMUST00000209872.2	1395	7	-6	0	-6	0	multi-exon	FALSE	canonical	3	6	junction_4	183.817542386163	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633571	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43643105_43643129_43643305_43643407_43646239
ES.32875.21	chr8	+	3659	7	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-6	1	intron_retention	FALSE	canonical	1	1	junction_1	190.994473451168	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633571	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633654_43636158_43636403_43636739_43636836_43638315_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.23	chr8	+	2315	8	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	101	junction_1	144.975296980878	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633578	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43635378_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.24	chr8	+	1594	9	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	193.213895398338	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633579	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.25	chr8	+	4366	7	ISM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	6	-20	6	3	intron_retention	FALSE	canonical	3	424	junction_1	42.3779292661745	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43633583	43646921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305
ES.32875.26	chr8	+	1537	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	169.648135256237	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633591	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646225
ES.32875.28	chr8	+	1497	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	179.198214276817	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633593	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643305_43643407_43646239
ES.32875.29	chr8	+	1556	11	Fusion	ENSMUSG00000109974.2_ENSMUSG00000091490.4	novel	1552	9	NA	NA	30	5175	multi-exon	TRUE	canonical	0	0	junction_7	234.358614093871	343	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATCTAAGAAAGTTTAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	43633607	43658597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43653174_43653381_43653801_43653928_43654608_43654761_43658352
ES.32875.3	chr8	+	1528	8	NNC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	-1090	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	177.676844930592	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGCTCTCTGCATG	NA	False	NA	20	True	AATAAA	-11	NA	43632487	43646917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43632553_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.30	chr8	+	3046	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	31	1	intron_retention	FALSE	canonical	3	24	junction_2	205.684124773093	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633608	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43635378_43635439_43636158_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.31	chr8	+	5961	6	NIC	ENSMUSG00000091490.4	novel	1395	7	NA	NA	45	1	intron_retention	FALSE	canonical	3	424	junction_1	56.806337674594	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633622	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43643129_43643305_43643407_43646239
ES.32875.32	chr8	+	3537	6	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	45	1	intron_retention	FALSE	canonical	1	1	junction_1	245.797965817457	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633622	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633654_43636158_43636403_43636739_43638496_43640023_43640749_43643305_43643407_43646239
ES.32875.33	chr8	+	3749	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	47	0	intron_retention	FALSE	canonical	3	101	junction_1	156.574795758023	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633624	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43635378_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.34	chr8	+	5930	5	NIC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	-626	0	intron_retention	FALSE	canonical	3	442	junction_1	45.4120028186382	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43635529	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43636403_43636739_43638496_43640607_43643129_43643305_43643407_43646239
ES.32875.35	chr8	+	5541	2	NNC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	618	43662	intron_retention	FALSE	non_canonical	0	0	junction_1	0	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCACGCACGCACGCAC	NA	False	NA	NA	False	NA	NA	NA	43636773	43690580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43642284_43690549
ES.32875.36	chr8	+	5460	4	NNC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	660	-1	intron_retention	FALSE	canonical	0	0	junction_2	241.556526625872	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGCTCTCTGCATG	NA	False	NA	20	True	AATAAA	-11	NA	43636815	43646917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43638496_43640607_43640753_43643105_43643129_43643305
ES.32875.37	chr8	+	6013	2	NIC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	-9	1	intron_retention	FALSE	canonical	3	562	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43638073	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43643407_43646239
ES.32875.38	chr8	+	5895	1	Genic_Genomic	ENSMUSG00000091490.4	novel	NA	NA	NA	NA	2944	3	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43641026	43646921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_43641000_43646900
ES.32875.39	chr8	+	4432	2	ISM	ENSMUSG00000091490.4	ENSMUST00000163869.2	1467	7	6155	-1	4228	1	intron_retention	FALSE	canonical	3	533	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43642310	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_43643129_43643305
ES.32875.4	chr8	+	1609	9	NNC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	-1086	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	214.998110456813	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43632491	43646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43632553_43633264_43633349_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.5	chr8	+	4051	6	NNC	ENSMUSG00000091490.4	novel	1467	7	NA	NA	-1071	3	intron_retention	FALSE	canonical	2	4	junction_1	241.74151484592	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTCTGCATGTGTT	NA	False	NA	24	True	AATAAA	-15	NA	43632506	43646921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43632553_43636158_43636403_43636739_43636836_43638311_43638496_43640607_43643407_43646239
ES.32875.7	chr8	+	3103	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-79	8	intron_retention	FALSE	canonical	3	424	junction_1	48.9810053887105	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGCATGTGTTCAGTA	NA	False	NA	29	True	AATAAA	-20	NA	43633498	43646926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ES.32875.8	chr8	+	4137	6	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	-66	1	intron_retention	FALSE	canonical	3	424	junction_1	50.8904706207361	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCTCTCTGCATGTG	NA	False	NA	22	True	AATAAA	-13	NA	43633511	43646919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43643407_43646239
ES.32875.9	chr8	+	3647	6	NNC	ENSMUSG00000091490.4	novel	1395	7	NA	NA	-58	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	235.120394691741	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGCTCTCTGCATG	NA	False	NA	20	True	AATAAA	-11	NA	43633519	43646917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640023_43640754_43643297_43643407_43646239
ES.32876.1	chr8	-	4005	1	Genic_Genomic	ENSMUSG00000031651.6	novel	NA	NA	NA	NA	6239	3457	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGGCAATTCTACTT	NA	False	NA	NA	False	NA	NA	NA	43583391	43579386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_43579400_43583400
ES.32876.10	chr8	-	5819	1	NIC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	967	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43588663	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43582800_43588700
ES.32876.11	chr8	-	2242	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	80.622730612142	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594542_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.13	chr8	-	2098	11	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	85.0823718522233	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589593_43591603_43591835_43593679_43593776_43594003_43594338_43595725_43595759_43596978_43597082_43597362_43597564_43618053_43618097_43633233
ES.32876.14	chr8	-	2021	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	73.261091310463	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633311	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594542_43595725_43595759_43618053_43618097_43633233
ES.32876.15	chr8	-	1462	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38807	-1	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	56.917093702644	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633330	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
ES.32876.16	chr8	-	1444	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38822	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	89.8118032332054	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633345	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43633233
ES.32876.17	chr8	-	4373	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-4823	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	79.6752087470682	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	4449	False	NA	-1	True	TATAAA	-18	NA	43599346	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43598568_43599144
ES.32876.18	chr8	-	1701	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38802	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	75.8714990955102	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633325	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.2	chr8	-	1863	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38806	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.9582447082275	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCTGAGCGCTCTG	NA	False	NA	9	True	TATAAA	-28	NA	43633329	43582834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43584218_43584611_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
ES.32876.20	chr8	-	1866	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	83.8372679659828	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618192_43633233
ES.32876.21	chr8	-	1810	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	75.7706242550502	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.22	chr8	-	7205	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38749	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	89.4659711845794	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633272	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43595029_43595069_43595759_43618053_43618097_43633233
ES.32876.23	chr8	-	1530	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38755	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	80.4929150608922	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633278	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589524_43589597_43593679_43593776_43595725_43595759_43597362_43597564_43614242_43614304_43618053_43618097_43633233
ES.32876.24	chr8	-	1767	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	82.9009736286096	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43633233
ES.32876.27	chr8	-	1210	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38789	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	72.7532817129234	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633312	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43595725_43595759_43633233
ES.32876.28	chr8	-	946	2	NNC	ENSMUSG00000031651.6	novel	1916	4	NA	NA	-38775	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633298	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43633233
ES.32876.29	chr8	-	2644	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-606	-1	intron_retention	FALSE	canonical	0	0	junction_5	87.0411396984208	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	8666	False	NA	-1	True	TATAAA	-18	NA	43595129	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43595036_43595074
ES.32876.3	chr8	-	1691	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	9	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	80.168445113004	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCTGAGCGCTCTG	NA	False	NA	9	True	TATAAA	-28	NA	43633351	43582834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43597362_43597564_43633233
ES.32876.30	chr8	-	2055	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38822	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_8	71.0164300238567	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633345	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.31	chr8	-	1753	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	91.0315021022942	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633311	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43597362_43597564_43602925_43603009_43633204
ES.32876.32	chr8	-	1673	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38770	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.5347190171037	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633293	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589441_43591603_43591835_43593679_43593776_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.33	chr8	-	1503	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38768	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_2	71.9249608967568	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633291	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ES.32876.35	chr8	-	2687	3	NIC	ENSMUSG00000031651.6	novel	1916	4	NA	NA	-1048	-1	intron_retention	FALSE	canonical	3	194	junction_2	25	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43593125	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43583726_43589312_43589597_43591603
ES.32876.36	chr8	-	1586	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38788	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	82.0563830545802	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633311	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43596978_43597082_43618053_43618097_43633233
ES.32876.38	chr8	-	1187	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38746	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_2	73.3277573637705	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633269	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43593679_43593776_43595725_43595759_43618053_43618097_43633233
ES.32876.39	chr8	-	1501	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38806	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	54.6308576927445	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633329	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43618053_43618097_43633233
ES.32876.4	chr8	-	7381	4	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38802	0	intron_retention	TRUE	canonical	0	0	junction_2	99.6404647832507	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633325	43582843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43595036_43595074_43595759_43633233
ES.32876.40	chr8	-	5977	5	NNC	ENSMUSG00000031651.6	novel	1916	4	NA	NA	-38808	-1	intron_retention	FALSE	canonical	0	0	junction_1	61.6497161388437	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43584108_43584611_43589312_43593776_43595725_43595759_43633233
ES.32876.41	chr8	-	1888	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38807	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	66.6047107943575	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633330	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589524_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
ES.32876.42	chr8	-	2052	11	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38741	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	82.2788551208632	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633264	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43619056_43619135_43633233
ES.32876.43	chr8	-	1609	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	68.3368009739038	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
ES.32876.44	chr8	-	1637	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	96.0728889958036	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594484_43633233
ES.32876.45	chr8	-	1856	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38752	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.8899749293619	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633275	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583723_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43611721_43611794_43618053_43618097_43633233
ES.32876.46	chr8	-	1952	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	75.3419415947406	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589417_43591596_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43633233
ES.32876.47	chr8	-	1554	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.3579963504135	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589441_43589573_43589597_43593679_43593776_43594003_43594338_43595725_43595759_43633233
ES.32876.48	chr8	-	3292	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38746	-1	intron_retention	FALSE	canonical	1	8	junction_2	79.6040199989925	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633269	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589524_43589597_43591603_43593776_43595725_43595759_43633233
ES.32876.5	chr8	-	1796	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38806	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_5	54.8005660629188	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633329	43582843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ES.32876.50	chr8	-	1968	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	79.6642646468816	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43596978_43597104_43618053_43618097_43633233
ES.32876.51	chr8	-	5656	5	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-3849	-1	intron_retention	FALSE	canonical	0	0	junction_4	106.640459020017	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	5423	False	NA	-1	True	TATAAA	-18	NA	43598372	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43595036_43595074
ES.32876.52	chr8	-	1507	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38737	-1	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_8	77.783352974785	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633260	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583723_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43618053_43618097_43619056_43619135_43633233
ES.32876.53	chr8	-	2746	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	60.0707066374149	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633331	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43584611_43589312_43589411_43589512_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ES.32876.55	chr8	-	1774	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38775	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	83.5913044092477	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633298	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43596978_43597082_43597362_43597564_43618053_43618097_43633233
ES.32876.56	chr8	-	1730	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	84.9443995823631	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633351	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589524_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43597362_43597564_43633233
ES.32876.58	chr8	-	3810	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38775	-1	intron_retention	FALSE	canonical	3	17	junction_7	82.2581799170472	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633298	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43633233
ES.32876.59	chr8	-	1960	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38770	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	76.9487451164735	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633293	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43633233
ES.32876.6	chr8	-	1302	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38807	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.8777218468779	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633330	43582843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43588723_43588802_43589312_43589411_43589573_43589597_43593684_43593776_43595725_43595759_43633233
ES.32876.60	chr8	-	1748	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_2	70.7225103442161	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633292	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43593679_43593776_43594003_43594341_43595725_43595759_43597362_43597564_43618053_43618097_43633233
ES.32876.63	chr8	-	4287	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38741	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	71.4510321828873	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTCTGTTTATTGCTT	NA	False	NA	-4	True	TATAAA	-15	NA	43633264	43582847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43590401_43591898_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
ES.32876.66	chr8	-	1155	4	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38798	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	113.408798404513	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCTGTTTATTGCT	NA	False	NA	-5	True	TATAAA	-14	NA	43633321	43582848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589407_43593679_43593776_43633233
ES.32876.67	chr8	-	2234	10	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.714911982896	305	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGTTGATTATCTGAG	NA	False	NA	NA	False	AATAGA	-20	NA	43633331	43582967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43589688_43589847_43591603_43591835_43593679_43593776_43594003_43594542_43595725_43595759_43597362_43597564_43633233
ES.32876.68	chr8	-	4341	5	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-3030	119	intron_retention	FALSE	canonical	0	0	junction_4	106.640459020017	292	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGACACATAGCCTTCT	6242	False	NA	NA	False	CATAAA	-24	NA	43597553	43583340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43595036_43595074
ES.32876.69	chr8	-	970	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38769	118	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	60.6835216176382	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGACACATAGCCTTC	NA	False	NA	NA	False	CATAAA	-23	NA	43633292	43583341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43618053_43618097_43633233
ES.32876.7	chr8	-	1860	9	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	-1	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_7	57.3389047680543	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633351	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
ES.32876.70	chr8	-	1303	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	118	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	60.6010709139564	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGACACATAGCCTTC	NA	False	NA	NA	False	CATAAA	-23	NA	43633331	43583341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ES.32876.71	chr8	-	924	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38808	112	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	84.5113010194495	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGACTCTGGACACATA	NA	False	NA	NA	False	CATAAA	-17	NA	43633331	43583347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43633233
ES.32876.72	chr8	-	2744	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38753	112	intron_retention	FALSE	canonical	3	14	junction_1	71.2235915971667	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGACTCTGGACACATA	NA	False	NA	NA	False	CATAAA	-17	NA	43633276	43583347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583723_43589312_43589411_43589573_43589597_43591603_43593776_43595725_43595759_43633233
ES.32876.73	chr8	-	3837	5	Antisense	novelGene_ENSMUSG00000109991.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	0.433012701892219	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTTCATTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	43633272	43610087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_43610346_43611721_43611794_43612530_43615786_43615864_43616078_43633233
ES.32876.74	chr8	-	4533	1	Antisense	novelGene_ENSMUSG00000109991.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGATTTGTTCCCC	NA	False	NA	NA	False	AATAAA	-21	NA	43615491	43610958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_43611000_43615500
ES.32876.9	chr8	-	1547	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38789	-1	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	70.9305215608125	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTGTTTATTGCTTTCT	NA	False	NA	-1	True	TATAAA	-18	NA	43633312	43582844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43633233
ES.32877.1	chr8	+	4585	2	Intergenic	novelGene_26827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAATGGAAAGGGAAACA	NA	False	NA	NA	False	NA	NA	NA	43715510	43720349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43719564_43719817
ES.32877.2	chr8	+	3420	3	Intergenic	novelGene_26828	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43715529	43720312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43717809_43718917_43719564_43719817
ES.32878.1	chr8	-	222	1	Intergenic	novelGene_26829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	43719816	43719594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_43719600_43719800
ES.32879.1	chr8	+	6714	2	Antisense	novelGene_ENSMUSG00000051176.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTTGCAAATGCTAT	NA	False	NA	NA	False	NA	NA	NA	43750831	43757740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_43751888_43752082
ES.3288.1	chr10	-	1165	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	-12	-5	-12	5	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCCTAGAGAGCCTT	5503	False	NA	-14	True	ATTAAA	-24	NA	79875641	79871777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ES.3288.10	chr10	-	2167	5	NIC	ENSMUSG00000004667.19	novel	900	6	NA	NA	12	1	intron_retention	FALSE	canonical	3	2552	junction_2	170.307075601691	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5621	False	NA	-20	True	ATTAAA	-18	NA	79875523	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79874448_79875416
ES.3288.13	chr10	-	1323	6	NIC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-37	0	intron_retention	FALSE	canonical	3	2552	junction_1	168.145175369381	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGTGCAATCCTAGA	5563	False	NA	-21	True	ATTAAA	-17	NA	79875581	79871784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ES.3288.14	chr10	-	1063	7	NNC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_1	1048.82823506362	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGGTGCAATCCTAGA	5587	False	NA	-21	True	ATTAAA	-17	NA	79875557	79871784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79872125_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ES.3288.15	chr10	-	939	5	NIC	ENSMUSG00000004667.19	novel	900	6	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_3	1219.80182816718	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTGTGGTGCAATCCTA	5595	False	NA	-23	True	ATTAAA	-15	NA	79875549	79871786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872136_79872360_79872433_79872597_79872808_79874272_79874448_79875416
ES.3288.16	chr10	-	1527	4	NIC	ENSMUSG00000004667.19	novel	1238	5	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	2912	junction_1	40.1081870279207	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTGTGGTGCAATCC	5592	False	NA	-25	True	ATTAAA	-13	NA	79875552	79871788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872808_79873021_79873219_79874272_79874448_79875416
ES.3288.2	chr10	-	2378	4	FSM	ENSMUSG00000004667.19	ENSMUST00000143438.8	2403	4	24	1	15	1	multi-exon	FALSE	canonical	3	2552	junction_2	187.276978474843	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5624	False	NA	-20	True	ATTAAA	-18	NA	79875520	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79872136_79872360_79872433_79872597_79874448_79875416
ES.3288.3	chr10	-	2566	3	NIC	ENSMUSG00000004667.19	novel	2403	4	NA	NA	1	1	intron_retention	FALSE	canonical	3	2815	junction_1	97	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5601	False	NA	-20	True	ATTAAA	-18	NA	79875543	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872136_79872360_79874448_79875416
ES.3288.4	chr10	-	3513	2	ISM	ENSMUSG00000004667.19	ENSMUST00000143438.8	2403	4	23	1	14	1	intron_retention	FALSE	canonical	3	2815	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5623	False	NA	-20	True	ATTAAA	-18	NA	79875521	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79872136_79872360
ES.3288.5	chr10	-	2242	6	NIC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	-41	1	intron_retention	FALSE	canonical	3	2552	junction_2	154.463458461864	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5474	False	NA	-20	True	ATTAAA	-18	NA	79875670	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79874448_79875416
ES.3288.6	chr10	-	1348	5	NIC	ENSMUSG00000004667.19	novel	900	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	2552	junction_2	180.319854702692	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5600	False	NA	-20	True	ATTAAA	-18	NA	79875544	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79872136_79872360_79872433_79872597_79873219_79874272_79874448_79875416
ES.3288.7	chr10	-	1154	6	FSM	ENSMUSG00000004667.19	ENSMUST00000152843.2	900	6	-29	-225	-20	1	multi-exon	FALSE	canonical	3	2552	junction_2	164.012926319848	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5580	False	NA	-20	True	ATTAAA	-18	NA	79875564	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79873219_79874272_79874448_79875416
ES.3288.9	chr10	-	2806	2	NIC	ENSMUSG00000004667.19	novel	2403	4	NA	NA	-14	1	intron_retention	FALSE	canonical	3	3009	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTGCAATCCTAGAG	5586	False	NA	-20	True	ATTAAA	-18	NA	79875558	79871783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79874448_79875416
ES.32880.1	chr8	+	933	1	Intergenic	novelGene_26830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	43758451	43759384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43758500_43759400
ES.32881.1	chr8	-	6092	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-7	-4313	-7	4309	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTAAGAGTACAAGAGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	43760024	43743790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.11	chr8	-	5550	3	NIC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	5	9	intron_retention	FALSE	canonical	3	2952	junction_2	688.5	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTGGGGAAAAAAAAGTG	NA	False	NA	NA	False	AATAAA	-30	NA	43760012	43748090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43749574_43753664_43757597_43759877
ES.32881.12	chr8	-	1864	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	1062	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	2142.59807243449	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTCTGGGGAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-28	NA	43758911	43748092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679_43757706_43758716
ES.32881.13	chr8	-	2011	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-228	-11	-228	7	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTCTGGGGAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-28	NA	43760245	43748092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.14	chr8	-	5668	2	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	6012	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43753961	43748099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43751883_43752076
ES.32881.15	chr8	-	3434	4	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	2021.71725685534	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43760071	43748099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43759201_43759877
ES.32881.17	chr8	-	1928	5	FSM	ENSMUSG00000051176.7	ENSMUST00000211248.2	1837	5	-96	5	-52	-1	multi-exon	FALSE	canonical	3	65	junction_3	1844.21519555067	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGAGTTCAATTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	43760069	43748104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43755911_43756017_43757512_43757597_43759877
ES.32881.18	chr8	-	1708	3	NIC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	2	35	junction_2	2147	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGAGTTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43760039	43748105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43749574_43753664_43753743_43759877
ES.32881.19	chr8	-	4756	2	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	6918	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGAGTTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43753055	43748105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43751873_43752066
ES.32881.2	chr8	-	4514	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-52	-2690	-52	2686	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGGTATGGTAGCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	43760069	43745413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.20	chr8	-	3699	4	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	1062	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2040.71017050438	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGAGTTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43758911	43748105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753892_43753981_43755937_43758862
ES.32881.21	chr8	-	3240	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	2003.33338879645	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGAGTTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43760070	43748105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460
ES.32881.22	chr8	-	3515	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	30	junction_4	1847.84068239121	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGAGTTCAATTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	43760026	43748105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43755911_43757597_43758460_43758596_43759877
ES.32881.24	chr8	-	2127	6	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-11	-24	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	2088.03932913152	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759998	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43758716_43758980_43759877
ES.32881.25	chr8	-	3027	5	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	-11	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2134.96374383735	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759998	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757595_43757679_43758980_43759877
ES.32881.26	chr8	-	1629	3	NIC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-3	-24	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	1469	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759976	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43749574_43757512_43757597_43759877
ES.32881.27	chr8	-	1987	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-75	-24	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	2142.33171742847	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760092	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758431_43758596_43759877
ES.32881.28	chr8	-	1599	3	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	1062	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2164.5	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43758911	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753751_43758844
ES.32881.29	chr8	-	1909	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-26	-24	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	2131.08874756543	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760043	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759877
ES.32881.3	chr8	-	3990	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	53	-2271	9	2267	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTCTGAGCACCATG	NA	False	NA	NA	False	NA	NA	NA	43759964	43745832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.30	chr8	-	1683	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	402	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2143.60572400803	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759571	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679_43757706_43759522
ES.32881.31	chr8	-	2110	6	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	21	-24	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	2095.39863510502	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759952	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758431_43758596_43758716_43758980_43759877
ES.32881.32	chr8	-	2061	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-50	-24	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	2077.85207606316	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760067	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758716_43758980_43759877
ES.32881.34	chr8	-	1711	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-3	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1788.73909655812	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759990	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753674_43753743_43757512_43757597_43759877
ES.32881.35	chr8	-	1920	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-53	-24	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	1868.82213907584	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760070	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43756745_43756865_43757512_43757597_43759877
ES.32881.37	chr8	-	2508	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-20	-24	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	2134.61483645177	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760037	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43759201_43759877
ES.32881.38	chr8	-	2044	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-11	-24	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	2132.93300117467	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760028	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758694_43758980_43759877
ES.32881.39	chr8	-	1820	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	33	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2138.65857490157	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759940	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758610_43759877
ES.32881.40	chr8	-	1711	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-52	-24	at_least_one_novel_splicesite	FALSE	canonical	3	230	junction_1	1663.49968064319	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760069	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749173_43749261_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.41	chr8	-	1699	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-20	-24	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	1756.10753870599	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760037	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43748731_43748799_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.43	chr8	-	1805	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	143	-24	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	2008.98996181332	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759830	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43759633
ES.32881.45	chr8	-	1904	6	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	1122	-24	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2102.32437078582	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43758851	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679_43757706_43758460_43758596_43758716
ES.32881.46	chr8	-	2241	5	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	-11	-24	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	2129.17971294111	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760028	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757595_43758716_43759201_43759877
ES.32881.48	chr8	-	2159	6	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-21	-24	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	1707.46392055586	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760038	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43755911_43756017_43757512_43757597_43758694_43758980_43759877
ES.32881.49	chr8	-	1804	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-54	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1788.73909655812	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760071	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749570_43753658_43753743_43757512_43757597_43759877
ES.32881.5	chr8	-	3477	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-63	-1642	-63	1638	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAATTTCAATTTTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	43760080	43746461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.50	chr8	-	1826	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-47	-24	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1385.73117482753	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760064	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43755911_43756021_43757512_43757597_43759877
ES.32881.51	chr8	-	1781	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	23	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1884.23092732818	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759950	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43755246_43755347_43757512_43757597_43759877
ES.32881.52	chr8	-	1744	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-20	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1805.42743477056	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760037	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757536_43757597_43759877
ES.32881.54	chr8	-	1977	6	NNC	ENSMUSG00000051176.7	novel	1744	4	NA	NA	-57	-24	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_5	2048.05912024043	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43760074	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749173_43749261_43749574_43753664_43753743_43757512_43757595_43758716_43758980_43759877
ES.32881.57	chr8	-	4491	4	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-11	-24	intron_retention	FALSE	canonical	3	101	junction_2	1963.17452668432	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43759998	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43755911_43757597_43758716
ES.32881.58	chr8	-	1806	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	-23582	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2151.57000815683	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGGAAATAAAAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43783599	43748127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43782483_43782564_43783481
ES.32881.6	chr8	-	2790	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-18	-1000	-18	996	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGGTCTCCTCAATGA	NA	False	NA	NA	False	AGTAAA	-18	NA	43760035	43747103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.60	chr8	-	1784	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-11	-25	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	2142.34630428883	1589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAATAAAAGGAAATAAAA	NA	False	NA	NA	False	AAAAAG	-29	NA	43760028	43748128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43757679_43757706_43759877
ES.32881.62	chr8	-	1733	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	1061	-26	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	2095.10942434996	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAATAAAAGGAAATAAA	NA	False	NA	NA	False	AAAAAG	-28	NA	43758912	43748129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43748731_43748799_43749574_43753664_43753743_43757512_43757597_43758716
ES.32881.63	chr8	-	1884	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	197	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2138.65857490157	1587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAATAAAAGGAAATAAA	NA	False	NA	NA	False	AAAAAG	-28	NA	43759776	43748129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759633
ES.32881.64	chr8	-	1732	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-87	127	-87	-127	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGATTTTTGTTTTT	NA	False	NA	NA	False	AATACA	-15	NA	43760104	43748230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.65	chr8	-	1498	5	FSM	ENSMUSG00000051176.7	ENSMUST00000211248.2	1837	5	-64	403	-20	-399	multi-exon	FALSE	canonical	3	65	junction_3	1844.21519555067	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTAAGGCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	43760037	43748502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43755911_43756017_43757512_43757597_43759877
ES.32881.7	chr8	-	2562	3	NIC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-11	853	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	1469	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTTTATTTCTAGAG	NA	False	NA	-8	True	CATAAA	-23	NA	43760028	43747246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_43749574_43757512_43757597_43759877
ES.32881.8	chr8	-	2679	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	-54	-853	-54	849	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCATTTTTATTTCT	NA	False	NA	-12	True	CATAAA	-19	NA	43760071	43747250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ES.32881.9	chr8	-	2658	5	NNC	ENSMUSG00000051176.7	novel	1837	5	NA	NA	21	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2141.6240332981	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTCATTTTTATTTCT	NA	False	NA	-12	True	CATAAA	-19	NA	43759952	43747250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43759633_43759732_43759877
ES.32882.1	chr8	+	1318	1	Intergenic	novelGene_26832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43793179	43794497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43793200_43794500
ES.32883.1	chr8	-	175	1	Intergenic	novelGene_26831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACATA	NA	False	NA	NA	False	NA	NA	NA	43793314	43793139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_43793100_43793300
ES.32884.1	chr8	+	1762	5	Intergenic	novelGene_26833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	40.5524351919832	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACAATCGTGTTCGA	NA	False	NA	NA	False	ATTAAA	-40	NA	43806965	43862011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43860399_43860638_43860753
ES.32884.2	chr8	+	1373	7	Intergenic	novelGene_26834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	37.1098220002318	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGATTTTCTATGGCT	NA	False	NA	NA	False	AATAAA	-7	NA	43806966	43861475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43847937_43848036_43850177_43850228_43860399_43860638_43860753
ES.32884.3	chr8	+	510	4	Intergenic	novelGene_26835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	23.3380947522857	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGGGCTCTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	43806967	43818276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43818030
ES.32884.4	chr8	+	1130	5	Intergenic	novelGene_26836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.2572305408145	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTCTATGGTTTTTTT	NA	False	NA	18	True	AATAAA	-18	NA	43806967	43824715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43818030_43818205_43824023
ES.32884.5	chr8	+	396	3	Intergenic	novelGene_26837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	9	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCATGTGATTAGCCTT	NA	False	NA	NA	False	AATATA	-12	NA	43806969	43824159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807056_43818030_43818205_43824023
ES.32884.6	chr8	+	2372	4	Intergenic	novelGene_26839	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	48.0832611206852	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATCAAGTTTGTAGT	NA	False	NA	NA	False	AATAAA	-40	NA	43806969	43841627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807056_43809132_43809201_43811094_43811184_43839498
ES.32884.7	chr8	+	952	3	Intergenic	novelGene_26838	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	9	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTCTATGGTTTTTTT	NA	False	NA	18	True	AATAAA	-18	NA	43806969	43824715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807056_43818030_43818205_43824023
ES.32884.8	chr8	+	1167	5	Intergenic	novelGene_26840	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTCTATGGTTTTTTT	NA	False	NA	18	True	AATAAA	-18	NA	43806971	43824715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
ES.32884.9	chr8	+	1211	2	Intergenic	novelGene_26841	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	102	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	43808682	43811787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_43809201_43811094
ES.32885.1	chr8	-	193	1	Intergenic	novelGene_26842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAATATATATA	NA	False	NA	NA	False	NA	NA	NA	43846695	43846502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_43846500_43846700
ES.32886.1	chr8	-	6052	1	Genic_Genomic	ENSMUSG00000109993.2	novel	NA	NA	NA	NA	-5923	-5820	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCATAAGTTCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	44373564	44367512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_44367500_44373600
ES.32887.1	chr8	+	124	1	Intergenic	novelGene_26843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	45359494	45359618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_45359500_45359600
ES.32888.1	chr8	+	15428	28	NIC	ENSMUSG00000070047.15	novel	14814	27	NA	NA	-578	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	18.6616689370792	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTTCTTCTGCAT	NA	False	NA	20	True	AATAAA	-27	NA	45387905	45505294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_45388659_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45502878_45502915_45503817
ES.32888.10	chr8	+	5883	17	NIC	ENSMUSG00000070047.15	novel	14627	26	NA	NA	-17628	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_14	16.2075165818209	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGGTTTTCTTCTGC	NA	False	NA	18	True	AATAAA	-25	NA	45479649	45505292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45496959_45497592_45498067_45498206_45503817
ES.32888.11	chr8	+	5034	16	NNC	ENSMUSG00000070047.15	novel	14651	27	NA	NA	-12893	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.9839434558225	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATACTTTAGCTTTA	NA	False	NA	-1	True	AATAAA	-6	NA	45484384	45505273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45502878_45502915_45503817_45504094_45504143
ES.32888.2	chr8	+	775	2	NNC	ENSMUSG00000070047.15	novel	14814	27	NA	NA	-161	-113083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGCTCAGCACCCTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	45388322	45390454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_45388659_45390015
ES.32888.3	chr8	+	14988	27	FSM	ENSMUSG00000070047.15	ENSMUST00000191428.7	14814	27	-156	-18	-156	18	multi-exon	FALSE	canonical	3	5	junction_1	18.9799021702045	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATTGCTGTTTATGA	NA	False	NA	38	True	AATAAA	-45	NA	45388327	45505312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_45388659_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45503817
ES.32888.4	chr8	+	10148	14	ISM	ENSMUSG00000070047.15	ENSMUST00000191428.7	14814	27	-156	20663	-156	-18906	5prime_fragment	FALSE	canonical	3	5	junction_1	12.6757467714142	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTACGCCATCATAAGT	NA	False	NA	NA	False	NA	NA	NA	45388327	45484631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_45388659_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301
ES.32888.5	chr8	+	14859	28	NNC	ENSMUSG00000070047.15	novel	14651	27	NA	NA	2696	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	18.6616689370792	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGGTTTTCTTCTGC	NA	False	NA	18	True	AATAAA	-25	NA	45391179	45505292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_45391366_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45502878_45502915_45503817
ES.32888.6	chr8	+	14823	27	NNC	ENSMUSG00000070047.15	novel	14627	26	NA	NA	2698	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	18.9799021702045	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTTCTTCTGCAT	NA	False	NA	20	True	AATAAA	-27	NA	45391181	45505294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_45391366_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45503817
ES.32888.7	chr8	+	20398	26	NNC	ENSMUSG00000070047.15	novel	14627	26	NA	NA	2732	-3	intron_retention	FALSE	canonical	2	5	junction_1	19.3417269135928	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTGGTTTTCTTCTG	NA	False	NA	17	True	AATAAA	-24	NA	45391215	45505291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_45391366_45403232_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067
ES.32888.8	chr8	+	8652	18	NIC	ENSMUSG00000070047.15	novel	14651	27	NA	NA	-20361	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_14	16.1836347772086	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGGTTTTCTTCTGC	NA	False	NA	18	True	AATAAA	-25	NA	45476916	45505292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45496959_45497592_45498067_45498206_45502878_45502915_45503817
ES.32888.9	chr8	+	6959	16	NIC	ENSMUSG00000070047.15	novel	14627	26	NA	NA	-17940	-8	intron_retention	FALSE	canonical	1	4	junction_13	15.9485283194267	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACTTTAGCTTTAA	NA	False	NA	0	True	AATAAA	-7	NA	45479337	45505274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45496959_45497592_45498067_45498206_45503817
ES.32889.1	chr8	-	5204	1	Intergenic	novelGene_26844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45415277	45410073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_45410100_45415300
ES.32889.2	chr8	-	4902	1	Intergenic	novelGene_26845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCGTGATCAAAACAAAAGC	NA	False	NA	NA	False	AAAACA	-43	NA	45419362	45414460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_45414500_45419400
ES.32889.3	chr8	-	2828	1	Intergenic	novelGene_26846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCTACATTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	45419362	45416534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_45416500_45419400
ES.3289.1	chr10	-	157	1	Intergenic	novelGene_2555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4646	False	NA	NA	False	NA	NA	NA	79876498	79876341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79876300_79876500
ES.32890.1	chr8	+	4299	1	Genic_Genomic	ENSMUSG00000054764.10	novel	NA	NA	NA	NA	-80	-14001	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTTAATGCTATCTGC	NA	False	NA	NA	False	NA	NA	NA	45522093	45526392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_45522100_45526400
ES.32890.2	chr8	+	560	1	Intergenic	novelGene_26847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTATATTTGTTCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	45523615	45524175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_45523600_45524200
ES.32891.1	chr8	-	765	1	Intergenic	novelGene_26848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCTCAAATGGTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	45524708	45523943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_45523900_45524700
ES.32892.1	chr8	-	3912	1	Genic_Genomic	ENSMUSG00000110231.2	novel	NA	NA	NA	NA	3426	2612	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTGTGACATCTGTT	NA	False	NA	NA	False	NA	NA	NA	45614830	45610918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_45610900_45614800
ES.32892.2	chr8	-	2017	3	NNC	ENSMUSG00000110231.2	novel	936	3	NA	NA	-25	2216	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGGCTCCTTGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	45618281	45611314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_45612932_45614492_45614559_45617947
ES.32892.3	chr8	-	3323	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-174	-2213	-174	2213	multi-exon	FALSE	canonical	3	13	junction_1	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATCGGCTCCTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	45618430	45611317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_45614092_45614492_45614559_45617947
ES.32892.4	chr8	-	5930	1	Genic_Genomic	ENSMUSG00000110231.2	novel	NA	NA	NA	NA	1009	2213	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATCGGCTCCTTGGTGG	NA	False	NA	NA	False	NA	NA	NA	45617247	45611317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_45611300_45617200
ES.32892.5	chr8	-	982	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-40	-6	-40	6	multi-exon	FALSE	canonical	3	13	junction_1	4	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTGACTCTTCTTCTG	NA	False	NA	NA	False	AGTAAA	-23	NA	45618296	45613524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_45614092_45614492_45614559_45617947
ES.32892.6	chr8	-	4356	2	ISM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	-25	-6	-25	6	intron_retention	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTGACTCTTCTTCTG	NA	False	NA	NA	False	AGTAAA	-23	NA	45618281	45613524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_45614092_45614492
ES.32893.1	chr8	+	1429	1	Genic_Genomic	ENSMUSG00000110260.2	novel	NA	NA	NA	NA	-16	-8207	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	45639761	45641190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_45639800_45641200
ES.32894.1	chr8	+	149	1	Intergenic	novelGene_26849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAATAATAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	45686200	45686349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_45686200_45686300
ES.32895.1	chr8	+	2377	1	Antisense	novelGene_ENSMUSG00000031645.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTGAGCAAGCCGGGG	NA	False	NA	NA	False	NA	NA	NA	45714281	45716658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_45714300_45716700
ES.32896.1	chr8	+	215	1	Intergenic	novelGene_26850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATATTCCATGGCTATA	3051	False	NA	NA	False	NA	NA	NA	45787806	45788021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_45787800_45788000
ES.32897.1	chr8	-	2345	14	FSM	ENSMUSG00000070044.16	ENSMUST00000155230.2	2661	14	-1	317	-1	-317	multi-exon	FALSE	canonical	0	0	junction_1	1.30995279737895	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCAGCATGCCTGATGT	NA	False	NA	NA	False	AATAAA	-20	NA	45811800	45792112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_45792410_45794019_45794099_45794192_45794322_45795427_45795552_45797494_45797699_45798008_45798122_45801478_45801634_45801987_45802179_45803437_45803609_45804699_45804826_45806855_45806999_45808268_45808408_45808658_45808767_45811434
ES.32898.1	chr8	-	6056	3	NIC	ENSMUSG00000031639.13	novel	4093	6	NA	NA	5	11	intron_retention	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGTTGTGTCTCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	45863590	45848809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_45852260_45853682_45856188_45863489
ES.32899.1	chr8	+	4841	23	NIC	ENSMUSG00000031626.19	novel	6307	23	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.287479787288034	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGCTTCTCACTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	46080742	46280940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46081310_46111839_46111979_46189189_46189240_46194523_46194617_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46238305_46238363_46243012_46243063_46245817_46246006_46252746_46252839_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276765_46276873_46278781
ES.329.1	chr1	+	193	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	38104288	38104481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38104300_38104500
ES.3290.1	chr10	+	184	1	Intergenic	novelGene_2556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	2952	False	NA	NA	False	NA	NA	NA	79877462	79877646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79877500_79877600
ES.32900.1	chr8	+	1615	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	-28	53	-28	45	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTGAATATTCTTTT	8832	False	NA	51	True	AGTAAA	-18	NA	46428536	46449942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.10	chr8	+	1505	12	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	58.4742650182239	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8869	False	NA	3	True	AATAAA	-16	NA	46428573	46449894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46428626_46432245_46432333_46433351_46433505_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.11	chr8	+	3366	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	9	-1735	3	1735	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAGGGAATGCCA	8869	False	NA	NA	False	AATAAA	-27	NA	46428573	46451730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.12	chr8	+	1383	11	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	62.5898554080452	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8869	False	NA	3	True	AATAAA	-16	NA	46428573	46449894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.13	chr8	+	1595	11	FSM	ENSMUSG00000031634.14	ENSMUST00000130412.8	1613	11	17	1	1	-1	multi-exon	FALSE	canonical	3	163	junction_5	20.5873747719324	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTAGCTGTGATTTA	8883	False	NA	2	True	AATAAA	-15	NA	46428587	46449893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46428626_46432245_46432333_46433351_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.14	chr8	+	1015	9	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	65.648210181238	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8886	False	NA	3	True	AATAAA	-16	NA	46428590	46449894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.15	chr8	+	5510	4	NNC	ENSMUSG00000031634.14	novel	835	7	NA	NA	-7	387	intron_retention	FALSE	non_canonical	0	0	junction_3	105.678758508983	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGGAAAGGAA	8891	False	NA	NA	False	NA	NA	NA	46428595	46438795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46428626_46432245_46432333_46433351_46433707_46433757
ES.32900.16	chr8	+	1983	1	FSM	ENSMUSG00000031634.14	ENSMUST00000210608.2	1905	1	473	-551	473	551	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATGATTCTCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	46446134	46448117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46446100_46448100
ES.32900.17	chr8	+	1955	2	FSM	ENSMUSG00000031634.14	ENSMUST00000151983.2	694	2	-1217	-44	-1217	44	multi-exon	FALSE	canonical	3	208	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCTTGAATATTCTTT	NA	False	NA	50	True	AGTAAA	-17	NA	46446947	46449941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46448700_46449738
ES.32900.3	chr8	+	1447	11	NIC	ENSMUSG00000031634.14	novel	1613	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	80.6004962763878	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTGTAGTCATGTAA	8866	False	NA	100	True	AGTAAA	-15	NA	46428570	46449991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46428626_46432245_46432333_46433351_46433505_46433609_46433677_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.4	chr8	+	5418	7	NNC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	1	167	intron_retention	FALSE	non_canonical	0	0	junction_4	79.2830723140543	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGTCATTGCTTTTC	8867	False	NA	NA	False	ATTAAA	-25	NA	46428571	46445355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46435323_46435495_46438506_46444784_46444950_46445144
ES.32900.5	chr8	+	1699	6	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	7	11763	1	-176	5prime_fragment	FALSE	canonical	3	175	junction_3	21.5090678552093	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAATGAAGTCTTTTTT	8867	False	NA	NA	False	TATAAA	-30	NA	46428571	46438232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077
ES.32900.6	chr8	+	5576	10	NNC	ENSMUSG00000031634.14	novel	1613	11	NA	NA	1	41	intron_retention	FALSE	non_canonical	0	0	junction_3	66.1022403012145	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTCCTTGAATATTC	8867	False	NA	47	True	AGTAAA	-14	NA	46428571	46449938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46428626_46432245_46432333_46433351_46433707_46433757_46436718_46437077_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.7	chr8	+	4494	10	NIC	ENSMUSG00000031634.14	novel	1613	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	163	junction_4	21.5767364435763	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8868	False	NA	3	True	AATAAA	-16	NA	46428572	46449894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46428626_46432245_46432333_46433351_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ES.32900.8	chr8	+	5549	5	NNC	ENSMUSG00000031634.14	novel	614	6	NA	NA	2	483	intron_retention	FALSE	non_canonical	0	0	junction_4	92.2642265452868	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCATTTAAGATAGGTG	8868	False	NA	NA	False	NA	NA	NA	46428572	46438891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433707_46433757
ES.32900.9	chr8	+	4444	5	NNC	ENSMUSG00000031634.14	novel	835	7	NA	NA	3	387	intron_retention	FALSE	non_canonical	0	0	junction_3	91.7506811963813	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGGAAAGGAA	8869	False	NA	NA	False	NA	NA	NA	46428573	46438795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46428626_46432245_46432333_46433351_46433707_46433757_46437271_46438358
ES.32901.1	chr8	-	1499	4	NIC	ENSMUSG00000050914.17	novel	927	5	NA	NA	0	-4	intron_retention	FALSE	canonical	3	27	junction_3	17.3076733143296	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTCTGTGCATTCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	46452904	46449942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_46450163_46450650_46451526_46452287_46452441_46452653
ES.32901.2	chr8	-	698	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTCTGTGCATTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	46452922	46449943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
ES.32901.3	chr8	-	2491	2	FSM	ENSMUSG00000050914.17	ENSMUST00000144525.2	416	2	-2020	-55	-21	1	multi-exon	FALSE	canonical	3	53	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAATTTCTGTGCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	46452925	46449946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46450163_46450650
ES.32901.4	chr8	-	732	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.7001945517928	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAATTTCTGTGCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	46452944	46449946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46450163_46450650_46450858_46451418_46451526_46452287_46452441_46452895
ES.32901.5	chr8	-	714	5	NNC	ENSMUSG00000050914.17	novel	927	5	NA	NA	-422	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.6258484032618	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAATTTCTGTGCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	46453326	46449946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46453280
ES.32901.6	chr8	-	909	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	10	8	-8	1	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAATTTCTGTGCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	46452894	46449946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
ES.32901.7	chr8	-	2030	3	NNC	ENSMUSG00000050914.17	novel	827	4	NA	NA	-19	0	intron_retention	FALSE	canonical	3	34	junction_2	9.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATTAAAATTTCTGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	46452923	46449950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46450163_46450650_46452441_46452895
ES.32902.1	chr8	+	4690	5	NIC	ENSMUSG00000031631.16	novel	4521	4	NA	NA	-29	0	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	46604778	46648625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46604951_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.10	chr8	+	4454	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	58	107	-6	-103	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTTTAAACCATCT	NA	False	NA	-89	True	AATAAA	-8	NA	46616745	46648520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.11	chr8	+	1935	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	58	2626	-6	-2622	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGACTATTTCTTCAA	NA	False	NA	NA	False	AATAGA	-14	NA	46616745	46646001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.2	chr8	+	176	1	Intergenic	novelGene_26852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTCAATTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	46613258	46613434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46613300_46613400
ES.32902.3	chr8	+	4817	6	NIC	ENSMUSG00000031631.16	novel	2043	6	NA	NA	-67	0	intron_retention	FALSE	canonical	3	9	junction_1	20.9990475974507	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTTGATTCTGTTTT	NA	False	NA	14	True	AATAAA	-15	NA	46616620	46648623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46616787_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.4	chr8	+	4673	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	-54	0	-54	0	multi-exon	FALSE	canonical	3	40	junction_1	7.58287544405155	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATTCTGTTTTGTTC	NA	False	NA	18	True	AATAAA	-19	NA	46616633	46648627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.5	chr8	+	4999	5	NNC	ENSMUSG00000031631.16	novel	4619	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	13	junction_1	18.8729303501073	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATTCTGTTTTGTTC	NA	False	NA	18	True	AATAAA	-19	NA	46616722	46648627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46617202_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.6	chr8	+	4829	6	NIC	ENSMUSG00000031631.16	novel	2043	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	5	junction_1	22.1774660410066	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	46616724	46648625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46616901_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.7	chr8	+	1848	3	NNC	ENSMUSG00000031631.16	novel	1430	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACACTTGGAGTATCA	NA	False	NA	NA	False	AATATA	-13	NA	46616725	46623832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46617202_46617798_46617934_46622595
ES.32902.8	chr8	+	5121	6	NNC	ENSMUSG00000031631.16	novel	4521	4	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_1	22.7859605898018	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	46616733	46648625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46617202_46617798_46617934_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32902.9	chr8	+	4687	5	ISM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	-38	-4	5	0	intron_retention	FALSE	canonical	2	6	junction_1	21.868927728629	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATTCTGTTTTGTTC	NA	False	NA	18	True	AATAAA	-19	NA	46616733	46648627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ES.32903.1	chr8	-	3705	19	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-306	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	14.0836346669494	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAAAGGTATTATATG	NA	False	NA	NA	False	AATAAA	-19	NA	46605502	46486297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507401_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.10	chr8	-	3679	19	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-304	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	14.0836346669494	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACAGTGCTCAAAGGT	NA	False	NA	NA	False	AATAAA	-11	NA	46605500	46486305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502528_46507410_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.11	chr8	-	3699	19	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-297	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.7068064555489	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACAGTGCTCAAAGGT	NA	False	NA	NA	False	AATAAA	-11	NA	46605493	46486305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500362_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.13	chr8	-	3657	19	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-302	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.9814719456816	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCACAGTGCTCAAAGG	NA	False	NA	NA	False	AATAAA	-10	NA	46605498	46486306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500362_46500469_46502402_46502535_46507401_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.14	chr8	-	5874	18	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	201	-13	intron_retention	FALSE	canonical	0	0	junction_6	18.4201258970259	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATATAAAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	46604995	46486321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500362_46500469_46502402_46502535_46507401_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.15	chr8	-	7002	12	NNC	ENSMUSG00000038291.17	novel	3275	17	NA	NA	-11694	-13	intron_retention	TRUE	canonical	0	0	junction_5	21.8465724376326	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATATAAAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	46521183	46486321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494469_46497004_46497170_46498222_46498337_46500362_46500469_46502402_46507518_46508884_46509161_46511503_46511636_46521092
ES.32903.16	chr8	-	3187	19	FSM	ENSMUSG00000038291.17	ENSMUST00000041582.15	3206	19	0	19	0	-13	multi-exon	FALSE	canonical	0	0	junction_18	14.0391867795859	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATATAAAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	46604742	46486321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604598
ES.32903.17	chr8	-	2698	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	348	399	-106	-207	multi-exon	FALSE	canonical	3	42	junction_13	6.48288344625891	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCATATGATTTTTAT	NA	False	NA	NA	False	ATTAAA	-31	NA	46604848	46486696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.18	chr8	-	3154	1	Intergenic	novelGene_26851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46600351	46597197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_46597200_46600400
ES.32903.2	chr8	-	3784	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	-342	3	-342	2	multi-exon	FALSE	canonical	3	42	junction_13	6.48288344625891	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCTCAAAGGTATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	46605538	46486300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.3	chr8	-	3603	20	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-295	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	17.8243196557719	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGCTCAAAGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	46605491	46486302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556602_46556651_46556700_46558198_46558329_46569218_46569436_46577098_46577184_46604818
ES.32903.4	chr8	-	3493	20	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-312	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	13.7082784297272	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGCTCAAAGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	46605508	46486302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818_46605142_46605400
ES.32903.6	chr8	-	3644	20	NNC	ENSMUSG00000038291.17	novel	3206	19	NA	NA	-261	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.5729564573525	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGCTCAAAGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	46605457	46486302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498273_46500362_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604598_46604641_46604818
ES.32903.8	chr8	-	3127	19	NNC	ENSMUSG00000038291.17	novel	3206	19	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.401304972511	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACAGTGCTCAAAGGTA	NA	False	NA	NA	False	AATAAA	-12	NA	46604753	46486304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558241_46569218_46569436_46577098_46577184_46604598
ES.32903.9	chr8	-	4078	21	NNC	ENSMUSG00000038291.17	novel	3445	19	NA	NA	-289	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	22.8350607619073	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACAGTGCTCAAAGGTA	NA	False	NA	NA	False	AATAAA	-12	NA	46605485	46486304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46531923_46532302_46532450_46532512_46533258_46533330_46556551_46556739_46558155_46558241_46569218_46569436_46577098_46577184_46604818
ES.32904.1	chr8	+	3892	1	Intergenic	novelGene_26853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGATCTGAAGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	46653138	46657030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46653100_46657000
ES.32905.1	chr8	+	182	1	Intergenic	novelGene_26854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCCAGCACAGATGCCA	NA	False	NA	NA	False	NA	NA	NA	46657117	46657299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46657100_46657300
ES.32906.1	chr8	-	6385	3	NNC	ENSMUSG00000031633.5	novel	1275	3	NA	NA	3	3965	intron_retention	FALSE	non_canonical	0	0	junction_1	3943.5	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTGAGTCTGGGGTCTT	NA	False	NA	NA	False	NA	NA	NA	46664064	46655868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46658214_46658721_46662546_46663848
ES.32906.12	chr8	-	1233	5	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	-378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3341.33329488395	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTATCTCCCTGCCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	46664067	46660211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848_46663969_46664028
ES.32906.14	chr8	-	1193	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	230	502	-24	-502	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTACATTTAGATT	NA	False	NA	-3	True	ATTAAA	-18	NA	46664091	46660335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ES.32906.15	chr8	-	1121	4	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	-549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3594.30169388529	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTCATTGAGT	NA	False	NA	-7	True	GATAAA	-25	NA	46664067	46660382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662540_46663843
ES.32906.16	chr8	-	2424	3	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	255	549	1	-549	intron_retention	FALSE	canonical	3	7531	junction_1	92	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCTTCATTGAGT	NA	False	NA	-7	True	GATAAA	-25	NA	46664066	46660382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_46660658_46661434_46661576_46662058
ES.32906.2	chr8	-	1696	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	-28	3	28	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTCTCACACAAACTGG	NA	False	NA	NA	False	TATAAA	-41	NA	46664064	46659805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ES.32906.21	chr8	-	1108	4	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	4	-553	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3594.30169388529	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAAAAATGCTTCATT	NA	False	NA	-11	True	GATAAA	-21	NA	46664063	46660386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663854
ES.32906.23	chr8	-	2897	2	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	254	560	0	-560	intron_retention	FALSE	canonical	3	7531	junction_1	0	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATACCTCAGAAAAAAATG	NA	False	NA	-18	True	AATAAA	-43	NA	46664067	46660393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_46660658_46661434
ES.32906.24	chr8	-	1033	5	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	3	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3341.33329488395	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGACCGTAAGGAAT	NA	False	NA	9	True	AATAAA	-27	NA	46664064	46660409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848_46663970_46664028
ES.32906.25	chr8	-	1082	4	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	2	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3594.30169388529	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGACCGTAAGGAAT	NA	False	NA	9	True	AATAAA	-27	NA	46664065	46660409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662540_46663853
ES.32906.27	chr8	-	1098	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	222	605	-32	568	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAAGAGACAG	NA	False	NA	-20	True	NA	NA	NA	46664099	46660438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ES.32906.29	chr8	-	1007	4	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	2	512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3594.30169388529	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTCACAAGTTCACAGAT	NA	False	NA	39	True	NA	NA	NA	46664065	46660494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662540_46663843
ES.32906.3	chr8	-	1330	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	223	372	-31	-372	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCCTGCCCTTATTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	46664098	46660205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ES.32906.4	chr8	-	2599	3	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	372	3	-372	intron_retention	FALSE	canonical	3	7531	junction_1	92	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCCTGCCCTTATTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	46664064	46660205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_46660658_46661434_46661576_46662058
ES.32906.7	chr8	-	1297	4	NNC	ENSMUSG00000031633.5	novel	1925	4	NA	NA	0	-373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3594.30169388529	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCCTGCCCTTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	46664067	46660206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_46660658_46661434_46661576_46662058_46662540_46663843
ES.32906.8	chr8	-	3081	2	ISM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	257	373	3	-373	intron_retention	FALSE	canonical	3	7531	junction_1	0	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCCTGCCCTTATTAA	NA	False	NA	NA	False	AATAAA	-18	NA	46664064	46660206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_46660658_46661434
ES.32907.1	chr8	+	189	1	Intergenic	novelGene_26855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAAACAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	46666120	46666309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46666100_46666300
ES.32908.1	chr8	-	6415	1	Antisense	novelGene_ENSMUSG00000089561.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAACGTATCTTCATAA	7044	False	NA	NA	False	AATAAA	-16	NA	46728511	46722096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_46722100_46728500
ES.32909.1	chr8	+	1476	4	NNC	ENSMUSG00000110179.2	novel	1423	5	NA	NA	-5053	5795	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTACTTTATCACTGTGC	1664	False	NA	NA	False	NA	NA	NA	46747114	46784506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46747308_46759690_46759837_46760047_46760136_46783457
ES.32909.2	chr8	+	1154	4	NNC	ENSMUSG00000110179.2	novel	1423	5	NA	NA	-28	15576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	1752	False	NA	NA	False	NA	NA	NA	46752139	46794287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46752353_46759690_46759837_46760047_46760136_46793580
ES.32909.3	chr8	+	3978	5	NNC	ENSMUSG00000110179.2	novel	1423	5	NA	NA	-21	-3446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATACATAAAAGT	1759	False	NA	NA	False	NA	NA	NA	46752146	46775265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46752353_46754676_46754785_46759690_46759860_46760047_46760136_46771858
ES.32909.4	chr8	+	2310	1	Intergenic	novelGene_26858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATGAAAAAAAAAAAAAA	42	False	NA	NA	False	NA	NA	NA	46791977	46794287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46792000_46794300
ES.3291.1	chr10	-	176	1	Intergenic	novelGene_2557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGACCATAACA	8815	False	NA	NA	False	NA	NA	NA	79879314	79879138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79879100_79879300
ES.32910.1	chr8	-	155	1	Intergenic	novelGene_26856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATTAACAAA	9220	False	NA	NA	False	NA	NA	NA	46755840	46755685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_46755700_46755800
ES.32911.1	chr8	-	166	1	Intergenic	novelGene_26857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTGAAAAAAAAAAAGA	3648	False	NA	NA	False	NA	NA	NA	46761412	46761246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_46761200_46761400
ES.32912.1	chr8	+	178	1	Intergenic	novelGene_26859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTGTATGTC	6888	False	NA	NA	False	NA	NA	NA	46814125	46814303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46814100_46814300
ES.32913.1	chr8	+	4069	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-214	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCTTTCAAGTGCCT	1992	False	NA	16	True	AATAAA	-25	NA	46923859	46989087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.10	chr8	+	3811	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2210	False	NA	17	True	AATAAA	-26	NA	46924077	46989088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988464
ES.32913.12	chr8	+	3999	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.420002273582	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGAGTGGAGAATGTCT	2211	False	NA	5	True	AATAAA	-14	NA	46924078	46989076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46941506_46941623_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979419_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.13	chr8	+	3656	20	NIC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	5	-9	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	91.0183385375634	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGAATGTCTTTC	2211	False	NA	8	True	AATAAA	-17	NA	46924078	46989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46924268_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.14	chr8	+	3842	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	121.660954110602	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTCTTTCAAGTGCC	2212	False	NA	15	True	AATAAA	-24	NA	46924079	46989086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974377_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.15	chr8	+	3896	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.9550956574469	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	2214	False	NA	6	True	AATAAA	-15	NA	46924081	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924286_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.17	chr8	+	4029	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.9507716838984	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGTCTTTCAAGTGC	2216	False	NA	14	True	AATAAA	-23	NA	46924083	46989085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964644_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.18	chr8	+	3763	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-8	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	121.840049788345	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2216	False	NA	7	True	AATAAA	-16	NA	46924083	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958769_46961407_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.19	chr8	+	3380	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCTGATTTATGTGAAAT	2216	False	NA	NA	False	ATTAAA	-36	NA	46924083	46988622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.2	chr8	+	3932	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	-35	0	-35	0	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2171	False	NA	17	True	AATAAA	-26	NA	46924038	46989088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.20	chr8	+	4084	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	121.841538664848	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGAGTGGAGAATGTC	2218	False	NA	4	True	AATAAA	-13	NA	46924085	46989075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46924874_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.22	chr8	+	3876	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.9952658382325	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTCTTTCAAGTGCC	2218	False	NA	15	True	AATAAA	-24	NA	46924085	46989086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971492_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.23	chr8	+	3977	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	121.660954110602	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGAATGTCTTTC	2218	False	NA	8	True	AATAAA	-17	NA	46924085	46989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.24	chr8	+	3837	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-4	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATGTCTTTCAAGTG	2220	False	NA	13	True	AATAAA	-22	NA	46924087	46989084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988392_46988433
ES.32913.27	chr8	+	2604	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	18	1275	0	92	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGATGCTACAAGTTCTG	2224	False	NA	6	True	CATAAA	-36	NA	46924091	46987813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.28	chr8	+	3827	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	0	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2224	False	NA	7	True	AATAAA	-16	NA	46924091	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988402_46988443
ES.32913.30	chr8	+	3820	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2228	False	NA	7	True	AATAAA	-16	NA	46924095	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988376_46988420
ES.32913.31	chr8	+	6833	20	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	4	-8	intron_retention	FALSE	canonical	0	0	junction_15	95.3329200799468	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAGAATGTCTTTCA	2228	False	NA	9	True	AATAAA	-18	NA	46924095	46989080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983517_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.34	chr8	+	3997	23	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	141.231976104493	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	2231	False	NA	6	True	AATAAA	-15	NA	46924098	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46924909_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.35	chr8	+	3856	21	NIC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	122.964415584347	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCTTTCAAGTGCCT	2246	False	NA	16	True	AATAAA	-25	NA	46924113	46989087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.36	chr8	+	3824	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.689919416921	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2247	False	NA	7	True	AATAAA	-16	NA	46924114	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945817_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.37	chr8	+	1794	3	ISM	ENSMUSG00000018796.14	ENSMUST00000128746.3	5676	6	25	9567	8	1352	5prime_fragment	FALSE	canonical	3	370	junction_1	29	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGTGTTTTTTGTTTT	2249	False	NA	NA	False	ATTAAA	-14	NA	46924116	46960101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46924268_46945836_46946064_46958685
ES.32913.4	chr8	+	3799	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	91.5329265564634	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2205	False	NA	7	True	AATAAA	-16	NA	46924072	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46945892_46945980_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.41	chr8	+	3454	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	16	119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	91.7312944718842	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGGGAAATTAACAGC	2257	False	NA	NA	False	NA	NA	NA	46924124	46988737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.43	chr8	+	3510	11	ISM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	51	12367	16	-4968	5prime_fragment	FALSE	canonical	3	339	junction_9	34.6827046234863	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGATCTCCAGTGAG	2257	False	NA	NA	False	NA	NA	NA	46924124	46976721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304
ES.32913.44	chr8	+	4638	3	NNC	ENSMUSG00000018796.14	novel	673	6	NA	NA	16	-9051	intron_retention	FALSE	canonical	0	0	junction_2	2	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGACTATCGGAACTT	2257	False	NA	NA	False	AATAAA	-17	NA	46924124	46949698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46925087_46945836_46949250_46949435
ES.32913.45	chr8	+	2329	20	NIC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	24	85	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	91.0183385375634	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAGGTGGATGCTACA	2265	False	NA	-1	True	CATAAA	-29	NA	46924132	46987806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46924268_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.46	chr8	+	3735	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	40	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	121.699045174446	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	2281	False	NA	6	True	AATAAA	-15	NA	46924148	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958769_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.48	chr8	+	3730	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.689919416921	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTCTTTCAAGTGCC	2348	False	NA	15	True	AATAAA	-24	NA	46924215	46989086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945817_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988392_46988433
ES.32913.49	chr8	+	3717	22	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	121.9812631982	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGAGTGGAGAATGTC	2348	False	NA	4	True	AATAAA	-13	NA	46924215	46989075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987360_46988374_46988414
ES.32913.5	chr8	+	1416	1	FSM	ENSMUSG00000018796.14	ENSMUST00000211289.2	1253	1	-141	-22	-1	22	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACACACCTTATTCACTT	2205	False	NA	NA	False	NA	NA	NA	46924072	46925488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46924100_46925500
ES.32913.50	chr8	+	3443	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	143.714813084803	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGAATGTCTTTC	2348	False	NA	8	True	AATAAA	-17	NA	46924215	46989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46958685_46958769_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.51	chr8	+	4463	22	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	61	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	122.125581252954	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAATGTCTTTCAAGT	2413	False	NA	12	True	AATAAA	-21	NA	46924280	46989083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.52	chr8	+	4401	21	NIC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	158	-11	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	93.1407537010518	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	2510	False	NA	6	True	AATAAA	-15	NA	46924377	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.53	chr8	+	4278	22	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	239	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	122.125581252954	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGAGAATGTCTTTC	2591	False	NA	8	True	AATAAA	-17	NA	46924458	46989079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988373_46988416
ES.32913.54	chr8	+	3769	22	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	-6511	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.689919416921	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	2996	False	NA	7	True	AATAAA	-16	NA	46937491	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46937609_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.55	chr8	+	4321	22	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	-3051	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	122.407334566012	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGAGTGGAGAATGTCT	6456	False	NA	5	True	AATAAA	-14	NA	46940951	46989076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46941623_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.56	chr8	+	4188	21	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	-2871	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	93.547795270653	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGAATGTCTTTCAAG	6636	False	NA	11	True	AATAAA	-20	NA	46941131	46989082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46941623_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.57	chr8	+	6164	22	NNC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	-2309	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	120.452849235246	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGTCTTTCAAGTGC	7198	False	NA	14	True	AATAAA	-23	NA	46941693	46989085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.58	chr8	+	3912	21	FSM	ENSMUSG00000018796.14	ENSMUST00000110372.9	3429	21	-23	-460	-23	-10	multi-exon	FALSE	canonical	3	16	junction_1	90.7041344151412	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	9484	False	NA	7	True	AATAAA	-16	NA	46943979	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.59	chr8	+	2393	17	NNC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	133.192471164852	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	9496	False	NA	6	True	AATAAA	-15	NA	46943991	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46944088_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983483_46988306
ES.32913.6	chr8	+	3626	21	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	121.60652737415	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGTCTTTCAAGTGC	2206	False	NA	14	True	AATAAA	-23	NA	46924073	46989085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.60	chr8	+	3747	22	NNC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	120.72949091802	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	9496	False	NA	6	True	AATAAA	-15	NA	46943991	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46944088_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.61	chr8	+	3850	22	NNC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	157.635173970032	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	9504	False	NA	6	True	AATAAA	-15	NA	46943999	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.62	chr8	+	3777	21	NIC	ENSMUSG00000018796.14	novel	3429	21	NA	NA	1	-10	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	91.1095494446109	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	9508	False	NA	7	True	AATAAA	-16	NA	46944003	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46944088_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.65	chr8	+	3091	15	ISM	ENSMUSG00000018796.14	ENSMUST00000110372.9	3429	21	22605	-468	-13215	-2	3prime_fragment	FALSE	canonical	3	339	junction_3	38.7882793153408	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTCTTTCAAGTGCC	NA	False	NA	15	True	AATAAA	-24	NA	46966607	46989086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.66	chr8	+	2777	13	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	-7827	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	118.35246324245	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	NA	False	NA	6	True	AATAAA	-15	NA	46971995	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.67	chr8	+	3721	10	ISM	ENSMUSG00000018796.14	ENSMUST00000110371.8	2100	20	31059	-1565	-2895	-6	3prime_fragment	FALSE	canonical	3	353	junction_4	31.9378254012076	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGAATGTCTTTCAAG	NA	False	NA	11	True	AATAAA	-20	NA	46976927	46989082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32913.69	chr8	+	1162	9	NIC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	-460	87	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	137.508124759957	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGGATGCTACAAG	NA	False	NA	1	True	CATAAA	-31	NA	46979362	46987808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986418_46986505_46986601_46986674_46987376
ES.32913.70	chr8	+	2605	6	NNC	ENSMUSG00000018796.14	novel	2100	20	NA	NA	-603	-10	intron_retention	FALSE	non_canonical	0	0	junction_5	167.440735784337	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGGAGAATGTCTTT	NA	False	NA	7	True	AATAAA	-16	NA	46983497	46989078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423
ES.32913.71	chr8	+	2584	2	ISM	ENSMUSG00000018796.14	ENSMUST00000152423.2	441	5	2296	-1585	2296	-11	intron_retention	FALSE	canonical	3	409	junction_1	0	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGTGGAGAATGTCTT	NA	False	NA	6	True	AATAAA	-15	NA	46986396	46989077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_46986505_46986601
ES.32913.8	chr8	+	5018	24	NNC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	0	1050	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	155.317712069228	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCGCCAGGGAAGCTG	2206	False	NA	NA	False	NA	NA	NA	46924073	46990138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_46924268_46924874_46925087_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376_46988383_46988423_46989207_46989306
ES.32913.9	chr8	+	2970	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	0	927	0	440	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGGGTGTCCAGTC	2206	False	NA	NA	False	AGTAAA	-22	NA	46924073	46988161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ES.32914.1	chr8	+	138	1	Intergenic	novelGene_26860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCGATTTTGCCTTCT	4007	False	NA	NA	False	NA	NA	NA	46990944	46991082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_46990900_46991100
ES.32915.1	chr8	+	1674	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	-30	1287	-30	342	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGATAGAACGGTTGCT	NA	False	NA	11	True	AATAAA	-17	NA	47005032	47031755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.10	chr8	+	1644	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	-3	253	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	128.806629988499	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAGCATAGAATGAT	NA	False	NA	3	True	AATAAA	-19	NA	47005069	47031666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026951_47029260_47029418_47031289
ES.32915.11	chr8	+	4244	15	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	-3	1137	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	124.05347760592	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATATCCAAAACTAAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	47005069	47034179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012057_47012135_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.12	chr8	+	987	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	0	10	0	-10	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAGAATGACTCCTTT	NA	False	NA	11	True	NA	NA	NA	47005072	47016024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.13	chr8	+	2798	5	NIC	ENSMUSG00000031629.15	novel	997	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	283	junction_2	33.633130987168	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGACTCCTTTTATTT	NA	False	NA	16	True	NA	NA	NA	47005072	47016029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47014874_47015452
ES.32915.14	chr8	+	3999	7	ISM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-17	14112	0	-2748	5prime_fragment	FALSE	canonical	3	36	junction_3	136.084532552381	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCCTTGTCAACTTCT	NA	False	NA	NA	False	AATACA	-20	NA	47005072	47018930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.15	chr8	+	1617	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	6	346	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGAACGGTTGCTATAA	NA	False	NA	15	True	AATAAA	-21	NA	47005078	47031759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.17	chr8	+	4424	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	22	-1515	-5	1515	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCGATTTTCACTTTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	47005084	47034557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.18	chr8	+	808	5	NIC	ENSMUSG00000031629.15	novel	783	9	NA	NA	-1	343	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	120.570259599953	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATAGAACGGTTGCTA	NA	False	NA	12	True	AATAAA	-18	NA	47005088	47031756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47005163_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.19	chr8	+	1421	7	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	-1	42	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	148.522070937472	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTTTCCTCCCTCCAA	NA	False	NA	63	True	NA	NA	NA	47005088	47016076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009521_47012903_47013007_47014812_47014874_47015452
ES.32915.2	chr8	+	4088	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	-1	-1156	-1	1156	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATTCCCTCTGACTC	NA	False	NA	NA	False	ATTAAA	-38	NA	47005061	47034198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.21	chr8	+	1608	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	0	189	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	112.12661904394	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGGTTAGTCATCACCA	NA	False	NA	-61	True	AATAAA	-12	NA	47005089	47031602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47023347_47023492_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.22	chr8	+	2788	15	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	2	-297	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	124.05347760592	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGGCAGTGTTAACAG	NA	False	NA	NA	False	AATAAA	-14	NA	47005091	47032745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012057_47012135_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.23	chr8	+	3214	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	32	-315	-1	315	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATGATGTTTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	47005094	47033357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.24	chr8	+	1628	13	NNC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	-1	259	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	88.0029592305471	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATAGAATGATCCTGGT	NA	False	NA	9	True	AATAAA	-25	NA	47005094	47031672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026368_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.25	chr8	+	5133	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	22	-4158	-1	-1486	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGAGTGGTTTAATT	NA	False	NA	NA	False	NA	NA	NA	47005094	47020192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.27	chr8	+	2602	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	34	295	1	-295	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAGTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	47005096	47032747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.28	chr8	+	2826	7	ISM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	7	15261	1	1747	5prime_fragment	FALSE	canonical	3	36	junction_3	136.084532552381	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCACCTTTGCTCGTC	NA	False	NA	NA	False	AATAAA	-20	NA	47005096	47017781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.29	chr8	+	704	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	24	269	1	-269	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGGTTTAGAGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	47005096	47015765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.3	chr8	+	4026	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	1	1135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	84.8519071903876	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAATATCCAAAACTAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	47005063	47034177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289_47033453_47033491
ES.32915.30	chr8	+	1441	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	-2	193	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAGTCATCACCAGGCA	NA	False	NA	-57	True	AATAAA	-16	NA	47005101	47031606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.31	chr8	+	1645	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	0	198	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	108.826608737159	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCATCACCAGGCATAAGC	NA	False	NA	-52	True	AATAAA	-21	NA	47005103	47031611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47009116_47009229_47009334_47009521_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.32	chr8	+	2707	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	31	-1741	0	1741	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAATCAGCACCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	47005103	47017775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.33	chr8	+	2585	13	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	0	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	137.966078761734	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGGCAGTGTTAACAG	NA	False	NA	NA	False	AATAAA	-14	NA	47005103	47032745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47025786_47025866_47026467_47026516_47026883_47026946_47029265_47029418_47031289
ES.32915.34	chr8	+	2994	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	101.563574982932	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATACTATTTTAAATGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	47005104	47033045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009120_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.36	chr8	+	1673	14	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	1	251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.883615132144	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATGCAAGCATAGAATG	NA	False	NA	1	True	AATAAA	-17	NA	47005104	47031664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007117_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47023347_47023492_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.37	chr8	+	4098	15	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	1	1146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	118.931316999625	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAAATTGTGTATTC	NA	False	NA	NA	False	ATTAAA	-28	NA	47005104	47034188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009120_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289_47033453_47033491
ES.32915.38	chr8	+	775	7	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	1	250	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	143.486836407464	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGAGGTCTTCTTAT	NA	False	NA	NA	False	AGTAAA	-13	NA	47005104	47015742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009120_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.39	chr8	+	1578	15	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	2	131	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	134.508876120136	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTCAGAAGGCATAGC	NA	False	NA	NA	False	ACTAAA	-21	NA	47005105	47031544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012057_47012135_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026951_47029260_47029418_47031289
ES.32915.4	chr8	+	2945	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	2	-16	2	16	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAGTAGTATGTCAGA	NA	False	NA	NA	False	ATTAAA	-31	NA	47005064	47033058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.40	chr8	+	3859	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	33	-2895	2	-2749	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTCCTTGTCAACTTC	NA	False	NA	NA	False	AATACA	-19	NA	47005105	47018929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.42	chr8	+	1050	7	ISM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	20	17024	6	-16	5prime_fragment	FALSE	canonical	3	36	junction_3	136.084532552381	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCTTTTTAGAATGAC	NA	False	NA	5	True	NA	NA	NA	47005109	47016018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ES.32915.43	chr8	+	9340	8	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	-3896	-292	intron_retention	FALSE	canonical	3	263	junction_6	17.2614942479922	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGTTAACAGTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	47009215	47032750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.44	chr8	+	177	1	Intergenic	novelGene_26861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	47011015	47011192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_47011000_47011200
ES.32915.45	chr8	+	969	8	NNC	ENSMUSG00000031629.15	novel	651	4	NA	NA	-4864	246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.838929962185	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGCAAATGCAAGCATA	NA	False	NA	-4	True	AATAAA	-12	NA	47021343	47031659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47021418_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.46	chr8	+	7815	2	ISM	ENSMUSG00000031629.15	ENSMUST00000136724.2	651	4	-1640	-1337	-1640	-292	intron_retention	FALSE	canonical	3	284	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGTTAACAGTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	47024567	47032750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47026516_47026883
ES.32915.5	chr8	+	2740	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-25	295	2	-295	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAGTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	47005064	47032747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.6	chr8	+	1663	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	-25	1372	2	257	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCATAGAATGATCCTG	NA	False	NA	7	True	AATAAA	-23	NA	47005064	47031670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.8	chr8	+	1382	11	NIC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	5	377	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	141.49219059722	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTTAATAAGTTGATC	NA	False	NA	46	True	TATAAA	-11	NA	47005067	47031790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47021644_47021715_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32915.9	chr8	+	1500	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	7	1424	-3	205	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGCATAAGCTTTTTAA	NA	False	NA	-45	True	AATAAA	-28	NA	47005069	47031618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ES.32916.1	chr8	+	3147	2	Antisense	novelGene_ENSMUSG00000038225.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAATGCATGTTTCC	NA	False	NA	NA	False	AATAAA	-5	NA	47042031	47045810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_47042260_47042891
ES.32917.1	chr8	+	181	1	Intergenic	novelGene_26863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATAATTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	47050016	47050197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_47050000_47050200
ES.32918.1	chr8	-	828	1	Intergenic	novelGene_26862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGAACAAAGCCAGATT	NA	False	NA	NA	False	NA	NA	NA	47024436	47023608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47023600_47024400
ES.32919.1	chr8	-	3803	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	3	15	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	45.5077925598844	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070240	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.10	chr8	-	3740	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-4	15	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	47.6017170844472	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070251	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.11	chr8	-	4820	12	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-9	15	intron_retention	FALSE	canonical	0	0	junction_2	51.719683098746	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070226	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47039641_47039732_47043249_47043339_47045627_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.12	chr8	-	3446	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.2773396220541	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070251	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47033862_47033911_47034472_47034520_47034602_47034686_47039377_47039487_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.13	chr8	-	5023	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	15	intron_retention	FALSE	canonical	2	8	junction_7	48.1714148339095	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070251	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.14	chr8	-	5124	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-9	-3282	-5	13	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTGTGTGTTTCTCGTG	NA	False	NA	3	True	AATAAA	-32	NA	47070252	47028615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.15	chr8	-	3939	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	8	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	54.3319821625742	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGTGTGTGTTTCTC	NA	False	NA	0	True	AATAAA	-29	NA	47070209	47028618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039523_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.16	chr8	-	4521	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	10	intron_retention	FALSE	canonical	0	0	junction_11	57.0844904790648	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGTGTGTGTTTCTC	NA	False	NA	0	True	AATAAA	-29	NA	47070251	47028618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060935_47063474_47063661_47065404_47065482_47070168
ES.32919.17	chr8	-	4318	13	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	1	10	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_4	60.7632015834145	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGTGTGTGTTTCTC	NA	False	NA	0	True	AATAAA	-29	NA	47070234	47028618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.18	chr8	-	3949	15	NIC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-8	10	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	46.1342871298516	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGTGTGTGTTTCTC	NA	False	NA	0	True	AATAAA	-29	NA	47070255	47028618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.19	chr8	-	4309	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	3	8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	46.558736842094	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATAGTGTGTGTTTC	NA	False	NA	-2	True	AATAAA	-27	NA	47070240	47028620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.2	chr8	-	4429	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-1	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.9920401827396	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070244	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029548_47030320_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.20	chr8	-	3458	13	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	59.9499791492875	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATAGTGTGTGTTTC	NA	False	NA	-2	True	AATAAA	-27	NA	47070245	47028620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039641_47039732_47043249_47043339_47045641_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.21	chr8	-	4024	16	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	63.5289610247869	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATAGTGTGTGTTTC	NA	False	NA	-2	True	AATAAA	-27	NA	47070250	47028620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066758_47066893_47070168
ES.32919.22	chr8	-	4619	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	8	intron_retention	FALSE	canonical	2	3	junction_4	49.335585534176	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATAGTGTGTGTTTC	NA	False	NA	-2	True	AATAAA	-27	NA	47070251	47028620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.23	chr8	-	4555	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-20	7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	46.3622053145949	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAAATAGTGTGTGTTT	NA	False	NA	-3	True	AATAAA	-26	NA	47070267	47028621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.24	chr8	-	5098	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-1	5	intron_retention	FALSE	canonical	3	18	junction_6	35.660463247878	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAATAGTGTGTGT	NA	False	NA	-5	True	AATAAA	-24	NA	47070248	47028623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.25	chr8	-	4383	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	55.3125599655343	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAATTGAAAAATAGTG	NA	False	NA	-10	True	AATAAA	-19	NA	47070211	47028628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.26	chr8	-	4298	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	53.5974476121069	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAATTGAAAAATAGTG	NA	False	NA	-10	True	AATAAA	-19	NA	47070251	47028628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.27	chr8	-	5408	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	7	-3	intron_retention	FALSE	canonical	2	3	junction_4	60.9524987231181	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCTTGAATTGAAAAATA	NA	False	NA	-13	True	AATAAA	-16	NA	47070210	47028631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.28	chr8	-	4426	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	14	junction_1	48.7279864827869	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGCTTGAATTGAAAAA	NA	False	NA	-15	True	AATAAA	-14	NA	47070253	47028633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.29	chr8	-	3549	14	NIC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	45.65395956178	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGCTTGAATTGAAAAA	NA	False	NA	-15	True	AATAAA	-14	NA	47070226	47028633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.3	chr8	-	4833	1	Genic_Genomic	ENSMUSG00000038225.16	novel	NA	NA	NA	NA	12202	15	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47033446	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_47028600_47033400
ES.32919.31	chr8	-	4654	10	NNC	ENSMUSG00000038225.16	novel	3772	15	NA	NA	2402	0	intron_retention	FALSE	canonical	0	0	junction_3	65.3199154777828	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATATAAAAAAAA	NA	False	NA	-35	True	NA	NA	NA	47063648	47028653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039390_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47058119_47058250_47063474
ES.32919.32	chr8	-	4084	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	13	31	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	46.9604696983081	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGCCCACATTATAAAAAA	NA	False	NA	NA	False	AATATA	-29	NA	47070204	47029165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.33	chr8	-	3360	1	NIC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	13095	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTTTGTGGACTGAA	NA	False	NA	NA	False	AATATA	-1	NA	47032553	47029193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47029200_47032600
ES.32919.34	chr8	-	3222	15	FSM	ENSMUSG00000038225.16	ENSMUST00000040468.16	3772	15	8	542	8	1	multi-exon	FALSE	canonical	3	14	junction_1	36.5959739059155	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTGTTTGTGGACTG	NA	False	NA	NA	False	AATACA	-15	NA	47070227	47029195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.35	chr8	-	4541	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-7	-2701	-3	0	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGGTGTTTGTGGACT	NA	False	NA	NA	False	AATACA	-14	NA	47070250	47029196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.36	chr8	-	4323	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-20	-1	intron_retention	FALSE	canonical	3	31	junction_7	35.2230984819148	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGGTGTTTGTGGAC	NA	False	NA	NA	False	AATACA	-13	NA	47070267	47029197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.37	chr8	-	4054	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	53.4220775274318	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGGTGTTTGTGGAC	NA	False	NA	NA	False	AATACA	-13	NA	47070220	47029197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.38	chr8	-	3978	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.7032586693208	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTGGTGTTTGTGGA	NA	False	NA	NA	False	AATACA	-12	NA	47070253	47029198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.4	chr8	-	3829	15	FSM	ENSMUSG00000038225.16	ENSMUST00000211400.2	3797	15	-17	-15	-5	15	multi-exon	FALSE	canonical	3	14	junction_1	36.5959739059155	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070252	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.40	chr8	-	3144	14	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.981294424511	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGGTGTTTGTG	NA	False	NA	NA	False	AATACA	-10	NA	47070267	47029200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034770_47039641_47039732_47043249_47043339_47045627_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.41	chr8	-	4615	14	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	11	-4	intron_retention	FALSE	canonical	3	18	junction_13	37.0480257641045	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGGTGTTTGTG	NA	False	NA	NA	False	AATACA	-10	NA	47070206	47029200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.42	chr8	-	5375	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	52.2083899036483	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATGTGGTGTTTGTG	NA	False	NA	NA	False	AATACA	-10	NA	47070241	47029200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066759_47066893_47070168
ES.32919.43	chr8	-	7109	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-3	-21	intron_retention	FALSE	canonical	3	92	junction_6	20.1349613028351	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACAAATTAATAGAAA	NA	False	NA	NA	False	AAAACA	-9	NA	47070250	47029217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.44	chr8	-	2013	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	270	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	37.7258937012174	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGTGATGACTAACC	NA	False	NA	0	True	ATTAAA	-23	NA	47070251	47031627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.45	chr8	-	2145	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	-43	-269	-39	269	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGTGATGACTAAC	NA	False	NA	-1	True	ATTAAA	-22	NA	47070286	47031628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.46	chr8	-	5622	2	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	8356	266	intron_retention	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47037292	47031631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47033453_47033491
ES.32919.47	chr8	-	2405	16	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	7	266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	57.5238694417853	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070210	47031631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066758_47066893_47069572_47069656_47070046
ES.32919.48	chr8	-	5039	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	266	intron_retention	FALSE	non_canonical	0	0	junction_1	50.3528521756437	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070251	47031631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47033453_47033491_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.49	chr8	-	2762	12	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	4	266	intron_retention	FALSE	canonical	0	0	junction_3	51.8894247096093	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070231	47031631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.5	chr8	-	4329	13	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	2462	15	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	40.0543901047896	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47063588	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ES.32919.50	chr8	-	2134	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	-6	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.1857405401802	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070223	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47040670_47040833_47043249_47043339_47045641_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.51	chr8	-	4075	13	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-9	261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.8259380065782	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070226	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47033453_47033491_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.52	chr8	-	1763	12	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	9	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.2399617674619	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070208	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039523_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.53	chr8	-	2898	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	6	261	intron_retention	FALSE	canonical	3	18	junction_12	38.5248837333309	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070211	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.54	chr8	-	1914	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-5	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.0299356726497	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070252	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046550_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.55	chr8	-	2496	10	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	2438	261	intron_retention	FALSE	canonical	3	18	junction_6	53.581598094131	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47063612	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47063474
ES.32919.57	chr8	-	2995	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-5	261	intron_retention	FALSE	canonical	0	0	junction_12	63.4384573411309	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070222	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066754_47066893_47070168
ES.32919.58	chr8	-	2097	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-3	261	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	50.2969878049225	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070250	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.59	chr8	-	2875	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-9	261	intron_retention	FALSE	canonical	2	3	junction_3	41.423540677038	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070226	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.6	chr8	-	5916	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-1	15	intron_retention	FALSE	canonical	2	3	junction_3	41.423540677038	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070244	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.60	chr8	-	2711	12	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-1	261	intron_retention	FALSE	canonical	3	19	junction_9	39.3488319840932	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070244	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.61	chr8	-	3774	10	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	7903	261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.8943005994902	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47058147	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47033453_47033491_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119
ES.32919.62	chr8	-	2002	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-4	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	56.9588245341114	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070251	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47066758_47066893_47070168
ES.32919.63	chr8	-	2780	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	6	261	intron_retention	FALSE	canonical	3	18	junction_6	37.1044883478476	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070229	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.64	chr8	-	2089	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-5	261	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	35.660463247878	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070252	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.65	chr8	-	2006	14	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	1	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.1720304900615	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTATGCCTGGTGA	NA	False	NA	-9	True	ATTAAA	-14	NA	47070246	47031636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045788_47046592_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.66	chr8	-	2693	12	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-5	260	intron_retention	FALSE	canonical	1	3	junction_3	51.2949661635429	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCTTATGCCTGGTG	NA	False	NA	-10	True	ATTAAA	-13	NA	47070252	47031637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.67	chr8	-	1948	13	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	7	260	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	47.6027397670904	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCTTATGCCTGGTG	NA	False	NA	-10	True	ATTAAA	-13	NA	47070210	47031637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.68	chr8	-	2181	14	NNC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-1	259	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	39.8802942544621	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTATGCCTGGT	NA	False	NA	-11	True	ATTAAA	-12	NA	47070248	47031638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47032202_47034472_47034520_47034602_47034770_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.69	chr8	-	1948	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	6	259	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	46.7745033823628	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCTTATGCCTGGT	NA	False	NA	-11	True	ATTAAA	-12	NA	47070211	47031638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.32919.7	chr8	-	5017	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	2	15	intron_retention	FALSE	canonical	3	19	junction_10	37.7258937012174	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070241	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
ES.32919.70	chr8	-	2787	13	ISM	ENSMUSG00000038225.16	ENSMUST00000136335.8	3943	14	6	2447	6	254	5prime_fragment	FALSE	canonical	3	92	junction_6	20.4659269681749	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTTAAAAAGCTTATGC	NA	False	NA	-16	True	ATTAAA	-7	NA	47070229	47031643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.71	chr8	-	7989	7	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-11	-3517	intron_retention	FALSE	canonical	3	92	junction_1	19.9471524005029	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCCTTAAAGGTCTTA	NA	False	NA	NA	False	TTTAAA	-35	NA	47070258	47043204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47043339_47045627_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.72	chr8	-	7003	5	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	-1	6500	intron_retention	FALSE	canonical	3	116	junction_2	15.2397506541282	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGAGGGTGGATGTGTC	NA	False	NA	NA	False	NA	NA	NA	47070244	47051683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.73	chr8	-	1383	6	NNC	ENSMUSG00000038225.16	novel	482	5	NA	NA	1	1604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.4999099098368	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCTCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-25	NA	47070242	47056579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47057398_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.74	chr8	-	2331	2	NNC	ENSMUSG00000038225.16	novel	346	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	AAGAAA	-11	NA	47070217	47063811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47065555_47069629
ES.32919.75	chr8	-	1748	2	FSM	ENSMUSG00000038225.16	ENSMUST00000132472.3	1748	2	-1	1	-1	-1	multi-exon	FALSE	canonical	3	123	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	47070248	47063813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47065482_47070168
ES.32919.8	chr8	-	5839	13	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	-4	15	intron_retention	FALSE	canonical	3	92	junction_6	20.4659269681749	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070251	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ES.32919.9	chr8	-	4623	14	NIC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	7	15	intron_retention	FALSE	canonical	3	14	junction_1	47.7145109606398	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTTTCTCGTGTT	NA	False	NA	5	True	AATAAA	-34	NA	47070210	47028613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070046
ES.3292.1	chr10	+	164	1	Intergenic	novelGene_2558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGCAAAACAAAC	1064	False	NA	NA	False	NA	NA	NA	79880727	79880891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79880700_79880900
ES.32920.1	chr8	+	2517	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	84	0	-20	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070409	47092724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ES.32920.10	chr8	+	2408	6	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	162	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	127.128910952623	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTGTATTTGA	NA	False	NA	14	True	CATAAA	-10	NA	47070638	47092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47070785_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47090953
ES.32920.11	chr8	+	3169	1	NIC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	19072	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTGTATTTGA	NA	False	NA	14	True	CATAAA	-10	NA	47089548	47092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47089500_47092700
ES.32920.2	chr8	+	5300	5	NIC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	-3	6	intron_retention	FALSE	canonical	3	221	junction_1	19.5064092031312	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGGGTTTGTTGTTG	NA	False	NA	27	True	CATAAA	-23	NA	47070438	47092730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47070537_47082768_47082837_47085351_47088588_47089236_47089358_47090953
ES.32920.3	chr8	+	2389	7	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	-2	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.9264764748966	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGTGATGGTATTTTA	NA	False	NA	-81	True	NA	NA	NA	47070439	47092622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47070537_47082768_47082841_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ES.32920.7	chr8	+	2005	8	NNC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.2784807228869	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTGTATTTGA	NA	False	NA	14	True	CATAAA	-10	NA	47070468	47092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953_47092070_47092515
ES.32920.8	chr8	+	2466	7	NNC	ENSMUSG00000031628.10	novel	1520	7	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	114.881702440187	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTGTATTTGA	NA	False	NA	14	True	CATAAA	-10	NA	47070471	47092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47070532_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090930
ES.32920.9	chr8	+	2266	6	NIC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	101.73416338674	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCAGTGTATTTGA	NA	False	NA	14	True	CATAAA	-10	NA	47070477	47092717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47089236_47089358_47090953
ES.32921.1	chr8	-	3173	5	NNC	ENSMUSG00000097534.4	novel	2586	5	NA	NA	52535	772	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.5	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGAATTCCTGTCTTG	NA	False	NA	NA	False	AATAAA	-33	NA	47140008	47121070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47123750_47125282_47125482_47127958_47128064_47131741_47131897_47139973
ES.32922.1	chr8	-	178	1	Intergenic	novelGene_26864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	8234	False	NA	NA	False	NA	NA	NA	47157852	47157674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47157700_47157900
ES.32923.1	chr8	-	3225	1	Genic_Genomic	ENSMUSG00000097534.4	novel	NA	NA	NA	NA	-98	-5419	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTATTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	47192648	47189423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_47189400_47192600
ES.32924.1	chr8	+	2468	9	FSM	ENSMUSG00000031627.10	ENSMUST00000034041.9	2497	9	26	3	-3	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.707106781186548	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGGTATCACTTCTGGC	NA	False	NA	NA	False	AATAAA	-27	NA	47192792	47300490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_47192972_47246527_47246621_47259505_47259606_47260256_47260434_47260739_47260787_47271825_47271944_47290708_47290874_47297855_47297903_47298948
ES.32924.2	chr8	+	177	1	Intergenic	novelGene_26865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTGATTCGCAT	NA	False	NA	NA	False	NA	NA	NA	47198023	47198200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_47198000_47198200
ES.32925.1	chr8	-	1532	1	ISM	ENSMUSG00000038143.17	ENSMUST00000079195.6	10467	4	107815	8	38606	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTAAGTGGATTTTTTT	NA	False	NA	-8	True	ATTAAA	-15	NA	47634622	47633090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_47633100_47634600
ES.32926.1	chr8	-	4840	4	FSM	ENSMUSG00000038143.17	ENSMUST00000079195.6	10467	4	1174	4453	1134	1439	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCGCTTCATTGTTGAA	8913	False	NA	NA	False	AATGAA	-20	NA	47741263	47637535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47639608_47644873_47647140_47656155_47656309_47740914
ES.32926.2	chr8	-	2870	5	NNC	ENSMUSG00000038143.17	novel	3424	5	NA	NA	-30	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.433012701892219	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTGCTTTTCACATGTA	NA	False	NA	NA	False	NA	NA	NA	47695751	47639243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47639608_47644667_47644722_47644873_47647140_47656155_47656309_47695718
ES.32926.3	chr8	-	175	1	Intergenic	novelGene_26866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGGGGGGAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	47658301	47658126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47658100_47658300
ES.32927.1	chr8	-	467	3	Intergenic	novelGene_26867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_2	5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTATGGCATTTTGTG	NA	False	NA	NA	False	TTTAAA	-6	NA	47790133	47788338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47788598_47789376_47789456_47790004
ES.32928.1	chr8	-	169	1	Intergenic	novelGene_26868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATAGATATGTAAT	NA	False	NA	NA	False	NA	NA	NA	47799772	47799603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47799600_47799800
ES.32929.1	chr8	-	3093	1	Intergenic	novelGene_26869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACCAGCTTTCCATAG	NA	False	NA	NA	False	NA	NA	NA	47851387	47848294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_47848300_47851400
ES.3293.1	chr10	+	1232	9	NNC	ENSMUSG00000075706.12	novel	879	7	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4050.15837460401	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	1795	False	NA	4	True	AATAAA	-14	NA	79882847	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79883111_79884579_79884663_79889114_79889270_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.10	chr10	+	814	6	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	130	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3501.52712969641	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	785	False	NA	3	True	AATAAA	-13	NA	79889451	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890958_79891866_79891934_79892019
ES.3293.12	chr10	+	721	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	151	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2993.03227884736	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	806	False	NA	4	True	AATAAA	-14	NA	79889472	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79889550_79890347_79890452_79890629_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.14	chr10	+	800	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	152	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2993.03227884736	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	807	False	NA	3	True	AATAAA	-13	NA	79889473	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79889550_79890347_79890437_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.17	chr10	+	2782	1	NIC	ENSMUSG00000075706.12	novel	879	7	NA	NA	170	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	657	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	825	False	NA	4	True	AATAAA	-14	NA	79889491	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79889500_79892300
ES.3293.18	chr10	+	1672	5	NIC	ENSMUSG00000075706.12	novel	735	6	NA	NA	174	-2	intron_retention	FALSE	canonical	3	7423	junction_3	341.037662876111	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTGTGTCTTTGGG	829	False	NA	2	True	AATAAA	-12	NA	79889495	79892271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.2	chr10	+	1477	10	NNC	ENSMUSG00000075706.12	novel	879	7	NA	NA	-152	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	4148.36447021929	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	1795	False	NA	3	True	AATAAA	-13	NA	79882847	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79883210_79884579_79884663_79887106_79887254_79889114_79889270_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.21	chr10	+	750	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	201	-1	at_least_one_novel_splicesite	TRUE	canonical	3	111	junction_3	3127.64293571586	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	856	False	NA	3	True	AATAAA	-13	NA	79889522	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890808_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.23	chr10	+	2574	3	NIC	ENSMUSG00000075706.12	novel	995	7	NA	NA	201	0	intron_retention	FALSE	canonical	3	7971	junction_2	901.5	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	856	False	NA	4	True	AATAAA	-14	NA	79889522	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79890443_79890533_79891934_79892019
ES.3293.24	chr10	+	613	6	NIC	ENSMUSG00000075706.12	novel	959	7	NA	NA	201	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_2	3142.91138914224	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	856	False	NA	4	True	AATAAA	-14	NA	79889522	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79889550_79890347_79890443_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.25	chr10	+	777	7	NNC	ENSMUSG00000075706.12	novel	959	7	NA	NA	201	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3167.48231600781	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	856	False	NA	4	True	AATAAA	-14	NA	79889522	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890782_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.26	chr10	+	1438	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	202	-681	202	681	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGGGAGCAGGGG	857	False	NA	NA	False	GGGGCT	-18	NA	79889523	79892954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.27	chr10	+	1073	7	FSM	ENSMUSG00000075706.12	ENSMUST00000097227.11	995	7	-78	0	-76	0	multi-exon	FALSE	canonical	3	666	junction_1	2928.20988641335	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	1126	False	NA	4	True	AATAAA	-14	NA	79889792	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79890135_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.28	chr10	+	1014	5	NIC	ENSMUSG00000075706.12	novel	735	6	NA	NA	-112	-1	intron_retention	FALSE	canonical	3	7423	junction_3	907.18258911864	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	1520	False	NA	3	True	AATAAA	-13	NA	79890186	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79890443_79890533_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.3	chr10	+	987	7	NNC	ENSMUSG00000075706.12	novel	735	6	NA	NA	-146	-1	at_least_one_novel_splicesite	FALSE	canonical	2	166	junction_1	3108.82200358914	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTCTTTGGGT	1801	False	NA	3	True	AATAAA	-13	NA	79882853	79892272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79883111_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.4	chr10	+	849	7	NIC	ENSMUSG00000075706.12	novel	879	7	NA	NA	92	0	combination_of_known_splicesites	FALSE	canonical	3	251	junction_1	3078.06977756443	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	2039	False	NA	4	True	AATAAA	-14	NA	79883091	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79883210_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.5	chr10	+	1085	9	NNC	ENSMUSG00000075706.12	novel	879	7	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4048.72506938913	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	2041	False	NA	4	True	AATAAA	-14	NA	79883093	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79883210_79884579_79884663_79889114_79889270_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.6	chr10	+	3236	8	NNC	ENSMUSG00000075706.12	novel	735	6	NA	NA	1902	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3794.72504986615	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	3849	False	NA	4	True	AATAAA	-14	NA	79884901	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79887254_79889116_79889270_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.7	chr10	+	954	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	7	-2	7	2	multi-exon	FALSE	canonical	3	7423	junction_5	743.006878987148	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTTTGGGTCAG	662	False	NA	6	True	AATAAA	-16	NA	79889328	79892275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.8	chr10	+	1048	5	NIC	ENSMUSG00000075706.12	novel	959	7	NA	NA	125	0	intron_retention	FALSE	canonical	3	7423	junction_3	336.117074097702	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	780	False	NA	4	True	AATAAA	-14	NA	79889446	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79889550_79890347_79890954_79891756_79891782_79891873_79891934_79892019
ES.3293.9	chr10	+	956	6	NIC	ENSMUSG00000075706.12	novel	959	7	NA	NA	126	0	intron_retention	FALSE	canonical	3	7423	junction_4	812.745815123031	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	781	False	NA	4	True	AATAAA	-14	NA	79889447	79892273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79889550_79890347_79890443_79890533_79890954_79891756_79891782_79891873_79891934_79892019
ES.32930.1	chr8	+	175	1	Intergenic	novelGene_26870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAAAAAAAGGCAA	7351	False	NA	NA	False	NA	NA	NA	47861200	47861375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_47861200_47861400
ES.32931.1	chr8	-	4111	30	NNC	ENSMUSG00000038102.16	novel	2060	4	NA	NA	8	26975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0057589942661	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTTCTGGTTTTCAG	4062	False	NA	NA	False	AATAAA	-21	NA	47986494	47916174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47916766_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.11	chr8	-	4080	28	NIC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	32.3854105241051	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4062	False	NA	-10	True	AATAAA	-16	NA	47986494	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.12	chr8	-	4152	29	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.9528420996146	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4066	False	NA	-10	True	AATAAA	-16	NA	47986490	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951816_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47983686_47983913_47986353
ES.32931.14	chr8	-	4262	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	24	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	31.8754636719907	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4078	False	NA	-10	True	AATAAA	-16	NA	47986478	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946409_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.15	chr8	-	4305	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	31.16734014249	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4062	False	NA	-10	True	AATAAA	-16	NA	47986494	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943948_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.16	chr8	-	4311	29	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_24	31.8153754063173	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4079	False	NA	-10	True	AATAAA	-16	NA	47986477	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47980029_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.18	chr8	-	4420	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	31.931369626602	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4032	False	NA	-10	True	AATAAA	-16	NA	47986524	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966709_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.19	chr8	-	5784	28	NIC	ENSMUSG00000038102.16	novel	4646	29	NA	NA	13	0	intron_retention	FALSE	canonical	3	87	junction_17	20.8802845425745	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCGTAAATACCTTT	4067	False	NA	-10	True	AATAAA	-16	NA	47986489	47943162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47983913_47986353
ES.32931.2	chr8	-	5690	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	39.5886999094841	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGGTTTTCTTTTAT	4049	False	NA	3	True	AATAAA	-29	NA	47986507	47943149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964113_47964172_47965504_47965595_47965658_47966317_47966464_47966709_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.20	chr8	-	4292	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	31.2867904717975	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	4025	False	NA	-11	True	AATAAA	-15	NA	47986531	47943163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47980029_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.21	chr8	-	4727	29	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_6	30.9496587630788	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	4058	False	NA	-11	True	AATAAA	-15	NA	47986498	47943163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47955224_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.23	chr8	-	4158	29	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6054323714587	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	4048	False	NA	-11	True	AATAAA	-15	NA	47986508	47943163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943961_47946279_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963902_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47983686_47983913_47986353
ES.32931.25	chr8	-	3798	6	NIC	ENSMUSG00000038102.16	novel	4646	29	NA	NA	8792	0	intron_retention	FALSE	canonical	3	124	junction_1	12.8840987267251	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	NA	False	NA	-11	True	AATAAA	-15	NA	47955591	47943163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47943954_47946273_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842
ES.32931.26	chr8	-	4642	29	FSM	ENSMUSG00000038102.16	ENSMUST00000125065.8	4646	29	4	0	1	0	multi-exon	FALSE	canonical	3	87	junction_17	20.7100980988818	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	4055	False	NA	-11	True	AATAAA	-15	NA	47986501	47943163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.3	chr8	-	4357	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	-25	0	-22	0	multi-exon	FALSE	canonical	3	87	junction_18	20.4181612288351	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGGTTTTCTTTTAT	4029	False	NA	3	True	AATAAA	-29	NA	47986527	47943149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.30	chr8	-	4196	29	NIC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	8	junction_7	29.5087327095294	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCTGTCGTAAATACC	4054	False	NA	-13	True	AATAAA	-13	NA	47986502	47943165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.32	chr8	-	4736	28	NIC	ENSMUSG00000038102.16	novel	4646	29	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	87	junction_16	21.0889422263177	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCTGTCGTAAATACC	4031	False	NA	-13	True	AATAAA	-13	NA	47986525	47943165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.35	chr8	-	3807	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	-23	548	-20	-534	multi-exon	FALSE	canonical	3	87	junction_18	20.4181612288351	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAAGGGGTGAGGTCAT	4031	False	NA	NA	False	AATAAA	-22	NA	47986525	47943697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.36	chr8	-	3750	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	25	-537	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	31.16734014249	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGAAAGGGGTGAGGT	4079	False	NA	NA	False	AATAAA	-19	NA	47986477	47943700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943948_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.37	chr8	-	3741	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-17	-542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	31.2867904717975	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTGATGTGAAAGGGGT	4034	False	NA	NA	False	AATAAA	-14	NA	47986522	47943705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47980029_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.38	chr8	-	3654	21	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.9807298332452	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGATTGTAATAGTCC	4053	False	NA	NA	False	NA	NA	NA	47986503	47957274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47958518_47958620_47958811_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.39	chr8	-	2664	21	ISM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	37	15075	37	-945	5prime_fragment	FALSE	canonical	3	87	junction_9	18.7868970295789	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGGTTTTAACATGG	4091	False	NA	NA	False	NA	NA	NA	47986465	47958224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.4	chr8	-	4012	28	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	37.6494552614176	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACCTTTGGTTTTCTTT	4096	False	NA	0	True	AATAAA	-26	NA	47986460	47943152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47980029_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.40	chr8	-	1998	17	ISM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	22	22134	22	-8004	5prime_fragment	FALSE	canonical	3	87	junction_5	19.7570201131142	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCAGCTTGTGGGTAGC	4076	False	NA	NA	False	AATAAA	-19	NA	47986480	47965283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.41	chr8	-	1603	6	NIC	ENSMUSG00000038102.16	novel	4646	29	NA	NA	-20	435	intron_retention	FALSE	canonical	3	108	junction_5	19.61224107541	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATATTTTATCATTAA	4031	False	NA	NA	False	AATAAA	-26	NA	47986525	47977256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.42	chr8	-	1102	6	ISM	ENSMUSG00000038102.16	ENSMUST00000125065.8	4646	29	36	34538	33	-10	5prime_fragment	FALSE	canonical	3	108	junction_5	19.61224107541	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGCATCATAATATCAT	4087	False	NA	NA	False	AATAAA	-13	NA	47986469	47977701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.5	chr8	-	4153	29	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	9	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.3816613257624	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACCTTTGGTTTTCTTT	4063	False	NA	0	True	AATAAA	-26	NA	47986493	47943152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943957_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47983686_47983913_47986353
ES.32931.6	chr8	-	4508	31	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	39.2357688283989	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACCTTTGGTTTTCTTT	4032	False	NA	0	True	AATAAA	-26	NA	47986524	47943152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47958905_47959063_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32931.8	chr8	-	4391	30	NNC	ENSMUSG00000038102.16	novel	4332	30	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	31.931369626602	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCGTAAATACCTTTG	4063	False	NA	-9	True	AATAAA	-17	NA	47986493	47943161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966544_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ES.32932.1	chr8	+	1985	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-34	565	intron_retention	FALSE	non_canonical	0	0	junction_6	72.1795600491503	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGATGTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	47986664	48004890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.10	chr8	+	2862	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	10	9	intron_retention	FALSE	non_canonical	0	0	junction_4	91.3777264375126	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTTTGTTTCAAATCA	NA	False	NA	16	True	AATAAA	-26	NA	47986708	48005869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996007_47997145_47997264_48000823_48000874_48003726
ES.32932.11	chr8	+	1101	6	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	10	-344	intron_retention	FALSE	non_canonical	0	0	junction_5	75.3885933016395	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTCAGAGTACTTTC	NA	False	NA	9	True	AATAAA	-13	NA	47986708	48003970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.12	chr8	+	2816	5	ISM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	14	6504	-8	2178	5prime_fragment	FALSE	canonical	3	180	junction_4	12.1320855585509	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAATTGTCTTCATTTA	NA	False	NA	NA	False	AGTAAA	-13	NA	47986712	47999356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145
ES.32932.14	chr8	+	2692	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	18	-189	intron_retention	FALSE	non_canonical	0	0	junction_6	72.1795600491503	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATGTATAGATCTCT	NA	False	NA	NA	False	AATGAA	-19	NA	47986738	48005671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.15	chr8	+	4786	8	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	127	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	69.0190745595826	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATTTTTTTCTATATG	NA	False	NA	1	True	AATAAA	-11	NA	47986847	48005854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48001006_48002723_48003422
ES.32932.2	chr8	+	2951	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-19	11	intron_retention	FALSE	non_canonical	0	0	junction_6	72.1795600491503	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTGTTTCAAATCACT	NA	False	NA	18	True	AATAAA	-28	NA	47986679	48005871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.3	chr8	+	1407	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-18	3	intron_retention	FALSE	non_canonical	0	0	junction_6	72.1795600491503	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGATGCCGGTGTGTG	NA	False	NA	19	True	AATAAA	-27	NA	47986680	48004328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.5	chr8	+	1038	7	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-7	-344	intron_retention	FALSE	non_canonical	0	0	junction_6	72.1795600491503	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTCAGAGTACTTTC	NA	False	NA	9	True	AATAAA	-13	NA	47986691	48003970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.6	chr8	+	3005	6	NNC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-7	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	75.3885933016395	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTTCTATATGTTT	NA	False	NA	4	True	AATAAA	-14	NA	47986691	48005857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_47986979_47990313_47990395_47995726_47996065_47997145_47997264_48000823_48000874_48003726
ES.32932.7	chr8	+	3067	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	-5	8	intron_retention	FALSE	canonical	3	147	junction_6	22.4010168419997	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTTTGTTTCAAATC	NA	False	NA	15	True	AATAAA	-25	NA	47986693	48005868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48001010_48003729
ES.32932.8	chr8	+	4676	7	ISM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	-5	970	-5	565	intron_retention	FALSE	canonical	2	108	junction_6	34.1451151541313	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGATGTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	47986693	48004890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48001006
ES.32932.9	chr8	+	5771	6	ISM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	2	1	2	-1	intron_retention	FALSE	canonical	3	161	junction_5	17.6340579561257	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTCTATATGTTTTG	NA	False	NA	6	True	AATAAA	-16	NA	47986700	48005859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823
ES.32933.1	chr8	-	176	1	Intergenic	novelGene_26871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGGAAGAAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	48016756	48016580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48016600_48016800
ES.32934.1	chr8	+	161	1	Intergenic	novelGene_26872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAACATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	48075489	48075650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48075500_48075600
ES.32935.1	chr8	+	371	1	Intergenic	novelGene_26873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGACACCCTCTTTTC	4948	False	NA	NA	False	NA	NA	NA	48115123	48115494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48115100_48115500
ES.32936.1	chr8	-	5220	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	1	-2409	1	2409	multi-exon	FALSE	canonical	3	212	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCCTCTAACTCTCAGA	NA	False	NA	NA	False	NA	NA	NA	48128192	48117803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.2	chr8	-	3566	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-22	-732	-22	732	multi-exon	FALSE	canonical	3	212	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGTGAGTATGTATCAG	NA	False	NA	NA	False	AATAAA	-15	NA	48128215	48119480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.3	chr8	-	3021	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-7	-202	-7	202	multi-exon	FALSE	canonical	3	212	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCTCTTTTACTGATGC	NA	False	NA	NA	False	AAGAAA	-18	NA	48128200	48120010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.4	chr8	-	2809	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	3	0	3	0	multi-exon	FALSE	canonical	3	212	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTCCTCCATCCTGA	NA	False	NA	NA	False	AATGAA	-21	NA	48128190	48120212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.5	chr8	-	2633	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	13	166	13	-166	multi-exon	FALSE	canonical	3	212	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGTGTGACTTAGG	NA	False	NA	NA	False	AAAAAG	-23	NA	48128180	48120378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.6	chr8	-	2419	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-18	411	-18	-411	multi-exon	FALSE	canonical	3	212	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCCAAGATTTTGATA	NA	False	NA	NA	False	NA	NA	NA	48128211	48120623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.7	chr8	-	1821	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-57	1048	-57	529	multi-exon	FALSE	canonical	3	212	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATTGCCTCCATGTC	NA	False	NA	NA	False	NA	NA	NA	48128250	48121260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.8	chr8	-	1962	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	-485	1335	-87	242	multi-exon	FALSE	canonical	3	212	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCTGCACTGAATTAC	NA	False	NA	-2	True	ATTAAA	-27	NA	48128678	48121547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32936.9	chr8	-	1146	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	41	1625	41	-48	multi-exon	FALSE	canonical	3	212	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTCACTTTTCATGT	NA	False	NA	NA	False	AATGAA	-14	NA	48128152	48121837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48122372_48127540
ES.32937.1	chr8	+	2679	1	Intergenic	novelGene_26874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACGTGTACGTGTATAT	NA	False	NA	NA	False	AATAAA	-12	NA	48133790	48136469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48133800_48136500
ES.32938.1	chr8	+	227	1	Intergenic	novelGene_26875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTTTAA	5004	False	NA	NA	False	NA	NA	NA	48141153	48141380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48141200_48141400
ES.32939.1	chr8	+	159	1	Intergenic	novelGene_26876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	48159086	48159245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48159100_48159200
ES.3294.10	chr10	-	4724	31	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	5	junction_30	33.1354794744244	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGCTGTGGCCTAC	NA	False	NA	-3	True	AATATA	-14	NA	79938533	79892832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ES.3294.11	chr10	-	4550	31	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	14	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	33.804421144118	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGCTGTGGCCTAC	NA	False	NA	-3	True	AATATA	-14	NA	79938518	79892832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.12	chr10	-	4392	29	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	3	19	junction_28	32.0305179732182	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGCTGTGGCCTAC	5672	False	NA	-3	True	AATATA	-14	NA	79911256	79892832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
ES.3294.13	chr10	-	4505	31	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-6	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	33.7523661721993	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGCTGTGGCCTA	NA	False	NA	-4	True	AATATA	-13	NA	79938483	79892833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.14	chr10	-	4896	29	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-3	-8	intron_retention	FALSE	canonical	3	132	junction_6	18.6242038591655	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGCTGTGGCCTA	NA	False	NA	-4	True	AATATA	-13	NA	79938535	79892833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.15	chr10	-	4458	31	NNC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	43.5531476091759	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGCTGTGGCCTA	NA	False	NA	-4	True	AATATA	-13	NA	79938543	79892833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894540_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79938443
ES.3294.16	chr10	-	4481	31	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	33.8779508759836	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTTGTGCTGTGGCCT	NA	False	NA	-5	True	AATATA	-12	NA	79938543	79892834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79938443
ES.3294.17	chr10	-	4498	32	NNC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	33.1447178370774	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTACTTTGTGCTGTGGC	NA	False	NA	-7	True	AATATA	-10	NA	79938544	79892836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904797_79905243_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.19	chr10	-	4651	32	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	-24	-21	combination_of_known_junctions	FALSE	canonical	1	5	junction_31	32.5969617398956	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTTGCTTACTTT	NA	False	NA	-17	True	AATGAA	-36	NA	79938556	79892846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ES.3294.2	chr10	-	4677	32	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-27	-5	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGTGGCCTACAG	NA	False	NA	-1	True	AATATA	-16	NA	79938559	79892830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.21	chr10	-	4620	32	NNC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	7	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	33.3489730912887	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCTTTTGCTTACTT	NA	False	NA	-18	True	AATGAA	-35	NA	79938525	79892847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904604_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.22	chr10	-	5273	24	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	3012	-22	intron_retention	FALSE	canonical	3	132	junction_7	19.0541959119915	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCTTTTGCTTACTT	8706	False	NA	-18	True	AATGAA	-35	NA	79908222	79892847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190
ES.3294.23	chr10	-	4604	32	FSM	ENSMUSG00000035673.11	ENSMUST00000218630.2	3903	32	56	-757	56	-22	multi-exon	FALSE	canonical	0	0	junction_31	33.3366769048019	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCCTTTTGCTTACTT	NA	False	NA	-18	True	AATGAA	-35	NA	79936965	79892847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79936905
ES.3294.24	chr10	-	4609	32	NNC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	33.1647105051864	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGCCTTTTGCTTAC	NA	False	NA	-20	True	AATGAA	-33	NA	79938534	79892849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894540_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.26	chr10	-	4522	31	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-23	-24	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	33.2799739583231	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGCCTTTTGCTTAC	NA	False	NA	-20	True	AATGAA	-33	NA	79938555	79892849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.28	chr10	-	4635	32	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-52	-28	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	33.3366769048019	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATGTGCCTTTTGC	NA	False	NA	-24	True	AATGAA	-29	NA	79941457	79892853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79941360
ES.3294.29	chr10	-	3394	17	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	8699	-28	intron_retention	FALSE	canonical	3	132	junction_7	21.9598354957409	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATGTGCCTTTTGC	7804	False	NA	-24	True	AATGAA	-29	NA	79902535	79892853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383
ES.3294.3	chr10	-	4661	32	NNC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	33.3489730912887	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGTGGCCTACAG	NA	False	NA	-1	True	AATATA	-16	NA	79938552	79892830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904701_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.31	chr10	-	4746	33	NNC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-14	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	41.5613134229117	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATATGTGCCTTTTGC	NA	False	NA	-24	True	AATGAA	-29	NA	79938546	79892853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79926466_79926572_79938443
ES.3294.32	chr10	-	4609	32	NNC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	-14	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	49.6239762801434	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATATGTGCCTTTTG	NA	False	NA	-25	True	AATGAA	-28	NA	79938546	79892854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900056_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904695_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ES.3294.33	chr10	-	179	1	Intergenic	novelGene_2559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGGGAAAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	79897849	79897670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79897700_79897800
ES.3294.34	chr10	-	2403	18	ISM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	1663	5425	-9	-1	internal_fragment	FALSE	canonical	3	133	junction_10	12.4322384803871	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGGGTCTCCATTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	79938541	79898250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.35	chr10	-	2342	10	ISM	ENSMUSG00000035673.11	ENSMUST00000217876.2	2156	15	2142	3816	2103	17	internal_fragment	FALSE	canonical	3	133	junction_6	11.8831761976001	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATGTATTGGGCGGGG	7797	False	NA	NA	False	NA	NA	NA	79909131	79902065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190
ES.3294.36	chr10	-	2038	1	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	7131	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATGTATTGGGCGGGG	9591	False	NA	NA	False	NA	NA	NA	79904103	79902065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79902100_79904100
ES.3294.37	chr10	-	5531	1	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	-1342	32	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCAGGAGGGTTGAGTG	4313	False	NA	NA	False	AAGAAA	-27	NA	79912615	79907084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79907100_79912600
ES.3294.5	chr10	-	6176	6	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	10459	-6	intron_retention	FALSE	canonical	3	132	junction_3	31.1704988731332	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCTGTGGCCTACA	9564	False	NA	-2	True	AATATA	-15	NA	79900775	79892831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79894734_79895769_79895914_79895998_79896074_79896227_79899563_79899978_79900077_79900153
ES.3294.6	chr10	-	3616	16	NIC	ENSMUSG00000035673.11	novel	4227	32	NA	NA	8505	-6	intron_retention	FALSE	canonical	3	132	junction_6	22.596361555692	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCTGTGGCCTACA	7610	False	NA	-2	True	AATATA	-15	NA	79902729	79892831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893981_79894086_79894164_79894249_79894382_79894470_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664
ES.3294.7	chr10	-	5067	31	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	132	junction_8	17.7359960406952	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCTGTGGCCTACA	NA	False	NA	-2	True	AATATA	-15	NA	79938534	79892831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.3294.9	chr10	-	4737	31	NIC	ENSMUSG00000035673.11	novel	3903	32	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	132	junction_7	17.9742099192766	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCTGTGGCCTACA	NA	False	NA	-2	True	AATATA	-15	NA	79938534	79892831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79893699_79893789_79893981_79894086_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
ES.32940.1	chr8	-	3434	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	-66	96	-66	5	multi-exon	FALSE	canonical	3	60	junction_1	33.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATGATTGGGTAATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	48167033	48162474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48165330_48165953_48166054_48166554
ES.32940.2	chr8	-	3493	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-96	-4	-95	4	multi-exon	FALSE	canonical	3	65	junction_1	31	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGATGATTGGGTAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	48167062	48162475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48165330_48165922_48166054_48166554
ES.32940.3	chr8	-	4480	1	FSM	ENSMUSG00000038069.7	ENSMUST00000212658.2	842	1	1	-3639	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATCTTATTAGATGA	NA	False	NA	NA	False	AATAAA	-11	NA	48166966	48162486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48162500_48167000
ES.32940.5	chr8	-	2686	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	-74	781	-73	-781	multi-exon	FALSE	canonical	3	65	junction_1	31	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48167040	48163260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48165330_48165922_48166054_48166554
ES.32940.6	chr8	-	2625	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	-43	882	-43	-781	multi-exon	FALSE	canonical	3	60	junction_1	33.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48167010	48163260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48165330_48165953_48166054_48166554
ES.32940.7	chr8	-	3643	1	FSM	ENSMUSG00000038069.7	ENSMUST00000212658.2	842	1	62	-2863	61	-783	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTGTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-25	NA	48166905	48163262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48163300_48166900
ES.32940.9	chr8	-	2362	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	63	1039	62	-938	multi-exon	FALSE	canonical	3	60	junction_1	33.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTTAAGCAGGTTAAT	NA	False	NA	NA	False	TTTAAA	-25	NA	48166904	48163417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48165330_48165953_48166054_48166554
ES.32941.1	chr8	-	165	1	Intergenic	novelGene_26877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	48172722	48172557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48172600_48172700
ES.32942.1	chr8	+	186	1	Intergenic	novelGene_26878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAGAAGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	48176119	48176305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48176100_48176300
ES.32943.1	chr8	+	2811	3	Antisense	novelGene_ENSMUSG00000110665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTGGACTGGAGCTA	NA	False	NA	NA	False	AATAAA	-17	NA	48199296	48211278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_48199356_48202627_48202708_48208606
ES.32944.1	chr8	-	158	1	Intergenic	novelGene_26879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	48218474	48218316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48218300_48218500
ES.32945.1	chr8	-	3358	1	Intergenic	novelGene_26880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAGTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	48224871	48221513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48221500_48224900
ES.32946.1	chr8	-	190	1	Intergenic	novelGene_26881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAAAGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	48229307	48229117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48229100_48229300
ES.32947.1	chr8	-	167	1	Intergenic	novelGene_26882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCTGCGACTAAGATC	NA	False	NA	NA	False	NA	NA	NA	48232452	48232285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48232300_48232500
ES.32948.1	chr8	-	185	1	Intergenic	novelGene_26883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATATTTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	48243592	48243407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48243400_48243600
ES.32949.1	chr8	-	84	1	Intergenic	novelGene_26884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAGTGTTGTCACT	NA	False	NA	NA	False	NA	NA	NA	48251715	48251631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48251600_48251700
ES.3295.1	chr10	-	179	1	Intergenic	novelGene_2560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAATTGTGTTCGGTG	NA	False	NA	NA	False	NA	NA	NA	79947842	79947663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_79947700_79947800
ES.32950.1	chr8	+	2720	1	Intergenic	novelGene_26886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	48370146	48372866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48370100_48372900
ES.32951.1	chr8	+	4355	1	Intergenic	novelGene_26887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTCCCACCCACCTCC	NA	False	NA	NA	False	NA	NA	NA	48409433	48413788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48409400_48413800
ES.32952.1	chr8	-	6639	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	20	2019	20	-2019	multi-exon	TRUE	canonical	3	189	junction_17	22.8505746170765	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTGAATAATTCTTG	NA	False	NA	NA	False	NA	NA	NA	48443566	48279012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.10	chr8	-	6124	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	-5483	-2295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	50.3980027152461	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTAATCAGGTTACA	NA	False	NA	NA	False	ATTAAA	-20	NA	48449442	48279288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48449215
ES.32952.11	chr8	-	6195	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-40	2523	-40	-2523	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATTCTGCATAGGG	NA	False	NA	-7	True	AATAAA	-34	NA	48443626	48279516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.12	chr8	-	4381	14	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	9	-2536	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	64.8778551947778	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAACTTAGAATTT	NA	False	NA	-20	True	AATAAA	-21	NA	48443577	48279529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321560_48443430
ES.32952.13	chr8	-	5843	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	18	-2536	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAACTTAGAATTT	NA	False	NA	-20	True	AATAAA	-21	NA	48443568	48279529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.14	chr8	-	6092	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	39	-2536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.9651679788013	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAACTTAGAATTT	NA	False	NA	-20	True	AATAAA	-21	NA	48443547	48279529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299264_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.15	chr8	-	3558	10	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	69910	-2536	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.8048331901248	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAACTTAGAATTT	NA	False	NA	-20	True	AATAAA	-21	NA	48373676	48279529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284660_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311894_48373623
ES.32952.16	chr8	-	3160	1	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	160892	-2541	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAACTTAG	NA	False	NA	-25	True	AATAAA	-16	NA	48282694	48279534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48279500_48282700
ES.32952.17	chr8	-	6123	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	12	-2541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.8657080865719	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAACTTAG	NA	False	NA	-25	True	AATAAA	-16	NA	48443574	48279534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281813_48284641_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.2	chr8	-	6721	24	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	33	-2057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	65.4597814445441	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGAGCAATTCCACAAAG	NA	False	NA	66	True	AATACA	-20	NA	48443553	48279050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48347547_48347681_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.23	chr8	-	5969	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-21	2730	-21	-2730	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAACTATTCTGGTA	NA	False	NA	NA	False	TATAAA	-19	NA	48443607	48279723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.24	chr8	-	5999	24	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	26	-2786	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	65.4597814445441	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGACTGAGGGACT	NA	False	NA	NA	False	AATAAA	-23	NA	48443560	48279779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48347547_48347681_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.25	chr8	-	5576	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	35	-2786	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGACTGAGGGACT	NA	False	NA	NA	False	AATAAA	-23	NA	48443551	48279779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.26	chr8	-	5755	22	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	25	-2788	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	51.5776059264733	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTGTGACTGAGGGA	NA	False	NA	NA	False	AATAAA	-21	NA	48443561	48279781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48443100
ES.32952.3	chr8	-	6986	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-431	2123	-58	-2123	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTGCTTATTCAG	NA	False	NA	0	True	AATACA	-18	NA	48444017	48279116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.32	chr8	-	5006	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	36	3636	36	-3636	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGTTTAGCCTAGCCA	NA	False	NA	NA	False	NA	NA	NA	48443550	48280629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.33	chr8	-	4887	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	9	3782	9	-3782	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGGTGTGGACTGGAT	NA	False	NA	NA	False	CATAAA	-19	NA	48443577	48280775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.34	chr8	-	4211	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	-16	4483	-16	-4483	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTTGTACAGTATGCA	NA	False	NA	99	True	NA	NA	NA	48443602	48281476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.35	chr8	-	3829	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	56	-4512	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGTAATCTGGTCCAAA	NA	False	NA	70	True	AAGAAA	-21	NA	48443530	48281505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.38	chr8	-	4045	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	20	-4596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.0281076329021	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTCATCAGGTTTATT	NA	False	NA	-14	True	AATATA	-31	NA	48443566	48281589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317103_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.4	chr8	-	6435	22	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	9	-2124	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	51.5776059264733	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGTTGCTTATTCA	NA	False	NA	-1	True	AATACA	-17	NA	48443577	48279117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48443100
ES.32952.40	chr8	-	3820	24	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	49	-4599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.9072485652864	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTTTCATCAGGTTT	NA	False	NA	-17	True	AATATA	-28	NA	48443537	48281592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321376_48321585_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.41	chr8	-	4008	24	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	-228	-4599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	49.9072485652864	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGTTTCATCAGGTTT	NA	False	NA	-17	True	AATATA	-28	NA	48444187	48281592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100_48443377_48444048
ES.32952.42	chr8	-	4059	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	9	-4601	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	50.8989437939418	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCAGTTTCATCAGGT	NA	False	NA	-19	True	AATATA	-26	NA	48443577	48281594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311949_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.43	chr8	-	3965	22	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	26	-4610	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	52.1916058271908	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCGTTTCATACCAGTT	NA	False	NA	-28	True	AATATA	-17	NA	48443560	48281603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48353687_48353892_48373623_48373734_48443100
ES.32952.44	chr8	-	3893	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	159	-4614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	50.4974633189915	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTTCCGTTTCATACC	NA	False	NA	-32	True	AATATA	-13	NA	48443427	48281607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302352_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.45	chr8	-	3915	22	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	39	-4614	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	51.5776059264733	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTTCCGTTTCATACC	NA	False	NA	-32	True	AATATA	-13	NA	48443547	48281607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48443100
ES.32952.46	chr8	-	3793	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	-10	-4614	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTTCCGTTTCATACC	NA	False	NA	-32	True	AATATA	-13	NA	48443596	48281607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.47	chr8	-	4102	14	ISM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	111650	17294	111650	-17294	internal_fragment	FALSE	canonical	3	191	junction_13	16.0951313892702	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACACATAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48331936	48294287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862
ES.32952.48	chr8	-	4012	21	ISM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	132	18486	132	-18486	5prime_fragment	FALSE	canonical	3	189	junction_15	16.5562676953473	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGGGGTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-5	NA	48443454	48295479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.49	chr8	-	1614	1	Intergenic	novelGene_26885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCCTAAAGTAATTACA	NA	False	NA	NA	False	AATATA	-28	NA	48348666	48347052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48347100_48348700
ES.32952.5	chr8	-	6283	22	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	101	-2124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	79.9971087912931	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATGTTGCTTATTCA	NA	False	NA	-1	True	AATACA	-17	NA	48443485	48279117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331447_48331559_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.50	chr8	-	2750	1	Intergenic	novelGene_26888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAACTTGAGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	48417147	48414397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48414400_48417100
ES.32952.51	chr8	-	1649	2	Intergenic	novelGene_26889	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTCATGTGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	48449440	48446886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48448311_48449215
ES.32952.6	chr8	-	6169	21	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	103	-2125	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	52.2994024822464	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAATGTTGCTTATTC	NA	False	NA	-2	True	AATACA	-16	NA	48443483	48279118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48373623_48373734_48443100
ES.32952.7	chr8	-	6371	23	NNC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	26	-2200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	50.9967791885263	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTTGCCCCGTGTCT	NA	False	NA	-77	True	AATACA	-22	NA	48443560	48279193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309303_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32952.9	chr8	-	6384	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	9	2285	9	-2285	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTTACATTCTGGAAAT	NA	False	NA	NA	False	ATTAAA	-30	NA	48443577	48279278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ES.32953.1	chr8	+	2388	6	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	-25	1	combination_of_known_junctions	TRUE	canonical	3	56	junction_1	132.43775896624	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48562967	48594699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.10	chr8	+	1688	4	NIC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	177.06935238927	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563184	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563284_48564693_48564826_48565002_48565139_48593377
ES.32953.11	chr8	+	2056	6	NNC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	153.050841226045	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGTGTTTGCTTTTAT	NA	False	NA	7	True	ATTAAA	-13	NA	48563186	48594697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590567_48591816_48591914_48593377
ES.32953.12	chr8	+	2096	7	NNC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.429587190158	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563197	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563321_48563381_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.13	chr8	+	2077	6	NNC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	153.050841226045	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563200	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590601_48591816_48591914_48593377
ES.32953.14	chr8	+	1785	5	NIC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	165.171123384204	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563204	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48593377
ES.32953.15	chr8	+	8322	7	NNC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	5	2680	intron_retention	FALSE	canonical	0	0	junction_3	195.279856160901	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTTTTGGCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	48563204	48608948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48564826_48565002_48565139_48590292_48593818_48597627_48597698_48597776_48597860_48603488_48603621_48606193
ES.32953.16	chr8	+	3647	4	ISM	ENSMUSG00000031562.17	ENSMUST00000098773.6	1126	5	-16	-1701	8	-317	intron_retention	FALSE	canonical	3	56	junction_1	168.999013803829	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCATTGGATAATTCAGT	NA	False	NA	NA	False	AATAAA	-15	NA	48563207	48593327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292
ES.32953.17	chr8	+	823	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	218	1055	11	1	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGAGCTCCATCTGTT	NA	False	NA	NA	False	TATAAA	-22	NA	48563210	48593645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.18	chr8	+	1897	6	NNC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.107235391464	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACGTGTTTGCTTTTA	NA	False	NA	6	True	ATTAAA	-12	NA	48563224	48594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563321_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.19	chr8	+	2499	6	NNC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	154.107235391464	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGACGTGTTTGCTTTT	NA	False	NA	5	True	ATTAAA	-11	NA	48563228	48594695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563552_48564317_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.2	chr8	+	2108	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	-14	2	-14	0	multi-exon	FALSE	canonical	3	319	junction_1	42.4480859403578	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48562978	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.20	chr8	+	4730	4	NNC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	177.389088979252	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563244	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563284_48564693_48564826_48564985_48565139_48590292
ES.32953.21	chr8	+	2030	7	NNC	ENSMUSG00000031562.17	novel	2072	6	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.429587190158	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563264	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48563329_48563388_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.22	chr8	+	3358	5	NIC	ENSMUSG00000031562.17	novel	1126	5	NA	NA	160	0	intron_retention	FALSE	canonical	3	56	junction_1	146.971723470877	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563405	48594700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48591914_48593377
ES.32953.23	chr8	+	4758	4	ISM	ENSMUSG00000031562.17	ENSMUST00000098773.6	1126	5	244	-3072	222	0	intron_retention	FALSE	canonical	3	56	junction_1	168.999013803829	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563467	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292
ES.32953.24	chr8	+	2424	5	ISM	ENSMUSG00000031562.17	ENSMUST00000033966.14	2072	6	1025	0	827	0	3prime_fragment	FALSE	canonical	3	326	junction_4	40.4505871403618	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48564072	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32953.25	chr8	+	3486	5	NNC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	1306	-1	intron_retention	FALSE	canonical	0	0	junction_2	186.617255365092	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGTGTTTGCTTTTAT	NA	False	NA	7	True	ATTAAA	-13	NA	48564551	48594697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48564826_48565002_48565139_48582706_48582842_48590292_48591914_48593377
ES.32953.26	chr8	+	166	1	Intergenic	novelGene_26890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGTAAGCCA	NA	False	NA	NA	False	NA	NA	NA	48567003	48567169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48567000_48567200
ES.32953.27	chr8	+	3180	4	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	19247	0	intron_retention	FALSE	canonical	0	0	junction_1	152.743794200179	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48582492	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48582596_48582706_48582842_48590292_48591914_48593377
ES.32953.28	chr8	+	3401	4	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	19248	-1	intron_retention	FALSE	canonical	0	0	junction_1	153.442714609286	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACGTGTTTGCTTTTAT	NA	False	NA	7	True	ATTAAA	-13	NA	48582493	48594697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48582842_48583332_48583445_48590292_48591914_48593377
ES.32953.29	chr8	+	4465	2	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	25935	0	intron_retention	FALSE	canonical	3	9	junction_1	0	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48589180	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48589240_48590292
ES.32953.3	chr8	+	3501	5	NIC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	1	1	intron_retention	FALSE	canonical	3	319	junction_1	46.0678846920498	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48562993	48594699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48591914_48593377
ES.32953.30	chr8	+	1584	4	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	25946	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	153.599045135921	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTTTGCTTTTATAT	NA	False	NA	9	True	ATTAAA	-15	NA	48589191	48594699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48589240_48590292_48590410_48591816_48591914_48593377
ES.32953.31	chr8	+	1714	3	ISM	ENSMUSG00000031562.17	ENSMUST00000033966.14	2072	6	27066	0	26868	0	3prime_fragment	FALSE	canonical	3	326	junction_2	8.5	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48590113	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48590410_48591816_48591914_48593377
ES.32953.32	chr8	+	3070	2	NIC	ENSMUSG00000031562.17	novel	2493	6	NA	NA	26913	-6	intron_retention	FALSE	canonical	3	326	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCAAGACGTGTTTGCT	NA	False	NA	2	True	ATTAAA	-8	NA	48590158	48594692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48591914_48593377
ES.32953.33	chr8	+	1514	4	NNC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	27100	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.677873777876	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGACGTGTTTGCTTTTA	NA	False	NA	6	True	ATTAAA	-12	NA	48590345	48594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48590410_48590566_48590601_48591816_48591914_48593377
ES.32953.34	chr8	+	3327	3	NNC	ENSMUSG00000031562.17	novel	381	4	NA	NA	37287	1324	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	48600532	48607592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_48602066_48603225_48603621_48606193
ES.32953.4	chr8	+	6368	3	ISM	ENSMUSG00000031562.17	ENSMUST00000174278.9	799	6	10875	-1056	9	0	intron_retention	FALSE	canonical	3	414	junction_1	0.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563001	48594700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48564826_48565002_48565139_48590292
ES.32953.5	chr8	+	3249	3	ISM	ENSMUSG00000031562.17	ENSMUST00000174278.9	799	6	10895	2043	-26	-25	internal_fragment	FALSE	canonical	3	414	junction_1	0.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48563021	48591601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_48564826_48565002_48565139_48590292
ES.32953.6	chr8	+	4877	4	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	326	junction_3	41.7212975189731	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563028	48594700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48564826_48565002_48565139_48590292_48591914_48593377
ES.32953.7	chr8	+	2662	6	FSM	ENSMUSG00000031562.17	ENSMUST00000174818.9	2493	6	-167	-2	-18	0	multi-exon	FALSE	canonical	3	18	junction_4	146.129531580718	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563029	48594700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591213_48591914_48593377
ES.32953.8	chr8	+	4930	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	-170	-3974	-18	0	multi-exon	FALSE	canonical	3	319	junction_1	45.0209827623619	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563029	48594700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
ES.32953.9	chr8	+	1916	5	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	156.60300124838	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563038	48594698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_48563284_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ES.32954.1	chr8	+	4162	2	Intergenic	novelGene_26891	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATCTAAGCTTCATT	NA	False	NA	NA	False	ATTAAA	-21	NA	48651135	48655359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48651944_48652005
ES.32955.1	chr8	+	2900	1	Intergenic	novelGene_26892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATCTCTAAACTGAATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	48673793	48676693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_48673800_48676700
ES.32956.1	chr8	+	8221	26	Antisense	novelGene_ENSMUSG00000110480.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCGGGACGGCGCAGGG	NA	False	NA	NA	False	NA	NA	NA	48681008	49009063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_48682237_48685042_48685174_48688324_48689937_48693279_48693575_48707442_48707681_48709866_48710043_48729064_48729937_48730698_48730854_48731989_48732228_48740827_48741073_48745150_48745298_48746541_48746808_48751815_48752080_48752622_48752751_48753791_48754007_48763657_48763805_48788623_48788812_48793988_48794193_48795293_48795489_48795651_48795752_48796266_48796478_48802233_48802448_48820344_48820469_48848470_48848712_48870044_48870287_49008918
ES.32957.1	chr8	-	10528	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-4	2009	combination_of_known_junctions	FALSE	canonical	3	47	junction_25	12.7658293894286	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTTTATATGTTTCTT	NA	False	NA	-17	True	AATAAA	-16	NA	49009078	48678707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.11	chr8	-	8490	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	18.3405997720903	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49008888	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008749
ES.32957.12	chr8	-	11910	25	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	47	junction_24	12.7636092944834	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49009128	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.13	chr8	-	7629	21	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-40	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	20.1620931453061	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49009114	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.14	chr8	-	8454	27	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-87	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_25	22.2000053307739	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAACTGTGTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	49008968	48680719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_48986615_48986664_49008912
ES.32957.15	chr8	-	8417	26	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-208	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	18.3405997720903	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAACTGTGTGATTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	49008556	48680719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008489
ES.32957.17	chr8	-	6915	25	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-18	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	18.6629460577786	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTGAACTGTGTGATT	NA	False	NA	NA	False	AATAAA	-9	NA	49009092	48680722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.18	chr8	-	2694	4	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	64689	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.2937902527543	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATGATAAAAAC	NA	False	NA	NA	False	AAAAAG	-10	NA	48688445	48680739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48683947_48684893_48685042_48685174_48688324
ES.32957.2	chr8	-	4358	5	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	43103	2009	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	32.0263563334951	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTTTATATGTTTCTT	1005	False	NA	-17	True	AATAAA	-16	NA	48710031	48678707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48693279_48693577_48707444_48707681_48709866
ES.32957.20	chr8	-	5659	19	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-82	-23	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	24.9443825784929	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATGATAAAAAC	NA	False	NA	NA	False	AAAAAG	-10	NA	49008963	48680739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.23	chr8	-	1544	3	ISM	ENSMUSG00000031561.17	ENSMUST00000190840.8	8663	27	439055	203	64470	-203	3prime_fragment	FALSE	canonical	3	69	junction_2	1.5	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAAAAAAATGCG	NA	False	NA	NA	False	NA	NA	NA	48688664	48681163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_48682237_48685042_48685174_48688324
ES.32957.24	chr8	-	9054	23	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-111	-22378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.9373502222411	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	49009185	48703338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48706562_48706679_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.25	chr8	-	3011	5	NNC	ENSMUSG00000031561.17	novel	2526	9	NA	NA	22300	-22382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.6196668472011	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	48730834	48703342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48704934_48707444_48707681_48709866_48710043_48729064_48729940_48730701
ES.32957.26	chr8	-	5593	21	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	2	9488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1208225477986	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAAAAGTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	49009072	48719461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48720514_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.28	chr8	-	5506	21	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	83	9483	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8220836033873	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGGCTAAAAAGTGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	49008265	48719466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48720514_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ES.32957.29	chr8	-	2845	1	Intergenic	novelGene_26893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAGGCTAAAAAG	NA	False	NA	NA	False	ATTAAA	-9	NA	48722316	48719471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48719500_48722300
ES.32957.3	chr8	-	7186	9	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	20957	2009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.3990034253315	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTTTATATGTTTCTT	NA	False	NA	-17	True	AATAAA	-16	NA	48732177	48678707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707671_48709866_48710043_48729064_48729940_48730701_48730857_48731992
ES.32957.30	chr8	-	5512	21	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	134	9369	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	22.6770809408971	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGAAGAGTTTGAGTTT	NA	False	NA	NA	False	AAGAAA	-19	NA	49008214	48719580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48720685_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ES.32957.31	chr8	-	4595	14	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-44	1003	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	22.5144266701158	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTCCTCATTTCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	49009118	48727946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.32	chr8	-	5662	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-3	1001	combination_of_known_junctions	FALSE	canonical	3	47	junction_19	13.0230990180234	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTCTTTCCTCATTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49009077	48727948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.33	chr8	-	5589	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	66	998	combination_of_known_junctions	FALSE	canonical	2	15	junction_19	17.4249478869885	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATTCCTCTTTCCTCAT	NA	False	NA	NA	False	ATTAAA	-11	NA	49008282	48727951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ES.32957.34	chr8	-	4554	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	77	-26	combination_of_known_junctions	FALSE	canonical	2	15	junction_19	17.4249478869885	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTAATTTTTAGATCCC	NA	False	NA	NA	False	AATAGA	-37	NA	49008271	48728975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ES.32957.35	chr8	-	3566	14	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-46	-28	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	22.5144266701158	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTAATTTTTAGATC	NA	False	NA	NA	False	AATAGA	-35	NA	49009120	48728977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.36	chr8	-	3412	14	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	103	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	30.7386386381285	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTAATTTTTAGATC	NA	False	NA	NA	False	AATAGA	-35	NA	49008245	48728977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48820345_48820469_48848470_48848710_48870046_48870281_49008187
ES.32957.37	chr8	-	4100	18	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-116964	-28	combination_of_known_splicesites	FALSE	canonical	1	3	junction_10	20.077014349507	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTAATTTTTAGATC	NA	False	NA	NA	False	AATAGA	-35	NA	48870098	48728977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042
ES.32957.38	chr8	-	4553	20	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	75	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	20.4820034511754	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTAATTTTTAGATC	NA	False	NA	NA	False	AATAGA	-35	NA	49008999	48728977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795750_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.4	chr8	-	8588	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-71	2	combination_of_known_junctions	FALSE	canonical	3	47	junction_25	12.7658293894286	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGATTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	49009145	48680714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.41	chr8	-	4794	21	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-46	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	24.6720489623379	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGAGGTGCTAAAGTG	NA	False	NA	NA	False	TATAAA	-38	NA	49009120	48728994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49002738_49002874_49008912
ES.32957.42	chr8	-	4641	20	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-42	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.4857518175621	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATTGAGGTGCTAAAG	NA	False	NA	NA	False	TATAAA	-36	NA	49009116	48728996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48729940_48730701_48730857_48731992_48732223_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802440_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.43	chr8	-	6142	1	Intergenic	novelGene_26894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	48786025	48779883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48779900_48786000
ES.32957.44	chr8	-	6229	12	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-61	5502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.5657400173776	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTTGTTGTTGTTGT	NA	False	NA	NA	False	AATACA	-20	NA	49008942	48782725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48787170_48787442_48787488_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.45	chr8	-	2649	11	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	93	4953	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	24.1331721909906	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTGTCACTCTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	49008981	48783274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48784145_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.46	chr8	-	5823	12	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-47	4952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.0488649080248	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCATTGTCACTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	49009121	48783275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48787170_48787442_48787488_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796472_48802233_48802440_48820365_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.47	chr8	-	4176	1	Intergenic	novelGene_26895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATCCATTGTCACTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48787455	48783279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48783300_48787500
ES.32957.48	chr8	-	3042	12	NNC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	16	2199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.5657400173776	138	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTGTGGTAAAATGTT	NA	False	NA	NA	False	AATAAA	-32	NA	49009058	48786028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48787170_48787442_48787488_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.49	chr8	-	2769	10	NIC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-66	628	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	13.5355042958587	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTCTACCTCACCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	49008947	48787599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.5	chr8	-	8535	26	NNC	ENSMUSG00000031561.17	novel	8961	29	NA	NA	-16008	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	18.3405997720903	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTGTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	49025082	48680716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49024900
ES.32957.50	chr8	-	2285	10	NIC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-35	-18	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	13.5355042958587	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGTTTCTAAACT	NA	False	NA	NA	False	CATAAA	-21	NA	49009109	48788245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.51	chr8	-	1522	8	NIC	ENSMUSG00000031561.17	novel	2267	10	NA	NA	-58	-6892	combination_of_known_junctions	FALSE	canonical	3	47	junction_7	13.8151056042704	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAAGAACAAATACCA	NA	False	NA	NA	False	NA	NA	NA	49008939	48795119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.52	chr8	-	7516	1	Intergenic	novelGene_26896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACAATAGAAATATAAAATA	4852	False	NA	NA	False	NA	NA	NA	48839035	48831519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48831500_48839000
ES.32957.53	chr8	-	3615	1	NIC	ENSMUSG00000031561.17	novel	8961	29	NA	NA	-95440	3511	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48848574	48844959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48845000_48848600
ES.32957.54	chr8	-	3264	1	Intergenic	novelGene_26897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAAATCTAAAGGCACAT	NA	False	NA	NA	False	NA	NA	NA	48873892	48870628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48870600_48873900
ES.32957.55	chr8	-	1513	1	Intergenic	novelGene_26898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	48958345	48956832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48956800_48958300
ES.32957.56	chr8	-	3088	1	Intergenic	novelGene_26899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCCCAAAATGTGTTTAT	NA	False	NA	NA	False	AATAGA	-32	NA	48996192	48993104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_48993100_48996200
ES.32957.6	chr8	-	8504	26	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	2	15	junction_25	16.204986886758	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49008340	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ES.32957.8	chr8	-	7514	20	NIC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	-111	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_16	19.6690062304678	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49009185	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32957.9	chr8	-	8427	26	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	18.5715481314833	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49009058	48680718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752013_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008912
ES.32958.1	chr8	+	5464	1	Intergenic	novelGene_26900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	49163073	49168537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_49163100_49168500
ES.32959.1	chr8	+	3576	1	Intergenic	novelGene_26901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACCATATGGTGGGTAG	NA	False	NA	NA	False	NA	NA	NA	49206250	49209826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_49206200_49209800
ES.3296.1	chr10	+	2391	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-38	213	-38	0	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	2609	False	NA	19	True	AATAAA	-14	NA	79951598	79966303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ES.3296.10	chr10	+	2740	11	NNC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	30.8830050351322	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCACCTGGGCTGTTCT	2648	False	NA	17	True	AATAAA	-21	NA	79951637	79966513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965356_79965535_79965738_79965946_79966089
ES.3296.11	chr10	+	3891	13	NNC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.998498468031	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCACCTGGGCTGTTCT	2657	False	NA	17	True	AATAAA	-21	NA	79951646	79966513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79952742_79953331_79953381_79953498_79953658_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964404_79965535_79965738_79965946_79966089
ES.3296.13	chr10	+	3197	12	NNC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	-201	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8794442051515	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTATGAGGGTGTTT	2990	False	NA	21	True	AATAAA	-16	NA	79951979	79966305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79952551_79952675_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224_79965535_79965738_79965946_79966089
ES.3296.14	chr10	+	2973	10	NIC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	429	0	intron_retention	FALSE	canonical	3	4	junction_8	26.5027368724137	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	207	False	NA	19	True	AATAAA	-14	NA	79952616	79966303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79965535_79965738_79965946_79966089
ES.3296.15	chr10	+	1321	10	NNC	ENSMUSG00000003068.18	novel	2566	10	NA	NA	441	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.9189052215844	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGGGTGTTTGGAAA	219	False	NA	26	True	AATAAA	-21	NA	79952628	79966310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79952742_79960635_79960720_79961312_79961403_79961908_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965743_79965946_79966089
ES.3296.16	chr10	+	3575	8	NNC	ENSMUSG00000003068.18	novel	1474	8	NA	NA	3035	364	intron_retention	FALSE	canonical	0	0	junction_1	34.3279501756995	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGGTGGATGCTTGCC	799	False	NA	NA	False	CATAAA	-16	NA	79955222	79964397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79955408_79958838_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224
ES.3296.17	chr10	+	3670	9	NNC	ENSMUSG00000003068.18	novel	1474	8	NA	NA	-3706	364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.140074284295	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGGTGGATGCTTGCC	2523	False	NA	NA	False	CATAAA	-16	NA	79956946	79964397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79957855_79958873_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224
ES.3296.18	chr10	+	3941	9	NIC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	-1333	0	intron_retention	FALSE	canonical	2	4	junction_7	32.7717008255598	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	4896	False	NA	19	True	AATAAA	-14	NA	79959319	79966303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79960720_79961312_79961403_79961866_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224_79965535_79965738_79965946_79966089
ES.3296.19	chr10	+	1346	9	NNC	ENSMUSG00000003068.18	novel	2566	10	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	26.8840101175401	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCACCTGGGCTGTT	492	False	NA	15	True	AATAAA	-19	NA	79960681	79966511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965882_79966089
ES.3296.2	chr10	+	2585	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-17	-2	-17	2	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGGCTGTTCTGTCCG	2630	False	NA	22	True	AATAAA	-26	NA	79951619	79966518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ES.3296.20	chr10	+	1857	6	NIC	ENSMUSG00000003068.18	novel	1474	8	NA	NA	157	-2	intron_retention	FALSE	canonical	3	47	junction_1	17.2348484182484	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTATGGCTATGAGGGT	1176	False	NA	17	True	AATAAA	-12	NA	79961365	79966301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79962000_79962066_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ES.3296.21	chr10	+	631	2	ISM	ENSMUSG00000003068.18	ENSMUST00000152592.2	723	5	3221	-207	3221	2	3prime_fragment	FALSE	canonical	3	85	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCACCTGGGCTGTT	5547	False	NA	15	True	AATAAA	-19	NA	79965736	79966511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79965946_79966089
ES.3296.3	chr10	+	3682	11	FSM	ENSMUSG00000003068.18	ENSMUST00000144883.8	3663	11	-15	-4	-15	3	multi-exon	FALSE	canonical	2	4	junction_9	30.2019866896203	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTATGAGGGTGTTTGG	2632	False	NA	23	True	AATAAA	-18	NA	79951621	79966307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224_79965535_79965738_79965946_79966089
ES.3296.5	chr10	+	2112	9	ISM	ENSMUSG00000003068.18	ENSMUST00000144883.8	3663	11	-7	1906	-7	364	5prime_fragment	FALSE	canonical	2	5	junction_8	26.3506997060799	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGGTGGATGCTTGCC	2640	False	NA	NA	False	CATAAA	-16	NA	79951629	79964397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224
ES.3296.7	chr10	+	2503	9	ISM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	-6	213	-6	0	intron_retention	FALSE	canonical	3	36	junction_1	19.7638400873919	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	2641	False	NA	19	True	AATAAA	-14	NA	79951630	79966303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738
ES.3296.8	chr10	+	3881	11	FSM	ENSMUSG00000003068.18	ENSMUST00000144883.8	3663	11	-5	-213	-5	0	multi-exon	FALSE	canonical	2	4	junction_9	30.2019866896203	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGGGCTGTTCTGTC	2642	False	NA	20	True	AATAAA	-24	NA	79951631	79966516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79964224_79965535_79965738_79965946_79966089
ES.3296.9	chr10	+	2331	10	NNC	ENSMUSG00000003068.18	novel	3663	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.6205486053139	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGGCTATGAGGGTGT	2645	False	NA	19	True	AATAAA	-14	NA	79951634	79966303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966113
ES.32960.1	chr8	-	1723	3	Intergenic	novelGene_26902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCACAGGTATATTCAG	NA	False	NA	NA	False	ATTAAA	-29	NA	49296368	49208368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_49209812_49289929_49290094_49296252
ES.32960.2	chr8	-	2409	1	Intergenic	novelGene_26903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGTTTTTCACCCCA	NA	False	NA	NA	False	NA	NA	NA	49232791	49230382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_49230400_49232800
ES.32960.3	chr8	-	2105	2	Intergenic	novelGene_26904	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49296340	49288076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_49290094_49296252
ES.32960.4	chr8	-	3726	1	Intergenic	novelGene_26905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGAACAAATGACTTAGA	NA	False	NA	NA	False	NA	NA	NA	49296676	49292950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_49293000_49296700
ES.32961.1	chr8	-	123	1	Intergenic	novelGene_26906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTTACTGACTT	NA	False	NA	NA	False	NA	NA	NA	50605652	50605529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_50605500_50605700
ES.32962.1	chr8	+	158	1	Intergenic	novelGene_26907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	51639210	51639368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_51639200_51639400
ES.32963.1	chr8	-	2611	2	Intergenic	novelGene_26908	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	8696	False	NA	NA	False	NA	NA	NA	52188473	52184668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_52187093_52188286
ES.32963.2	chr8	-	3752	2	Intergenic	novelGene_26909	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	8696	False	NA	NA	False	NA	NA	NA	52188473	52184668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_52184925_52184977
ES.32963.3	chr8	-	2473	3	Intergenic	novelGene_26910	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	8696	False	NA	NA	False	NA	NA	NA	52188473	52184668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_52185744_52185881_52187093_52188286
ES.32963.4	chr8	-	3384	1	Intergenic	novelGene_26911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	9116	False	NA	NA	False	NA	NA	NA	52188053	52184669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_52184700_52188100
ES.32964.1	chr8	-	1092	1	Intergenic	novelGene_26912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGGAGGGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	52748608	52747516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_52747500_52748600
ES.32965.1	chr8	+	2201	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	-133	42828	-133	-42828	5prime_fragment	FALSE	canonical	3	54	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTGTTGCATCTTTC	NA	False	NA	18	True	NA	NA	NA	52809512	52813546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_52809842_52811674
ES.32965.2	chr8	+	2512	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	2	42382	2	-42382	5prime_fragment	FALSE	canonical	3	54	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCAACTGCTTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	52809647	52813992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_52809842_52811674
ES.32965.3	chr8	+	2203	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	52	42641	52	-42641	5prime_fragment	FALSE	canonical	3	54	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTTTCTCGTGAGTG	NA	False	NA	21	True	NA	NA	NA	52809697	52813733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_52809842_52811674
ES.32965.4	chr8	+	1037	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	121	43738	121	-43738	5prime_fragment	FALSE	canonical	3	54	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACCTGTGTGTTTTTGG	NA	False	NA	2	True	NA	NA	NA	52809766	52812636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_52809842_52811674
ES.32966.1	chr8	+	191	1	Intergenic	novelGene_26913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTAGAGATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	53400877	53401068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_53400900_53401100
ES.32967.1	chr8	+	1321	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-57	-83	-57	0	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964704	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ES.32967.10	chr8	+	1203	9	NNC	ENSMUSG00000031521.6	novel	1147	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	121.481415759778	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964818	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972031_53973279_53973380_53974084_53974219_53976210
ES.32967.11	chr8	+	4679	6	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	314	junction_2	40.6034481294385	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTTGTCTACTTCC	NA	False	NA	20	True	AATAAA	-14	NA	53964827	53976454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_53964967_53966576_53967385_53968978_53970904_53971950_53973380_53974084_53974219_53976210
ES.32967.12	chr8	+	6183	5	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	70	-83	-1	0	intron_retention	FALSE	canonical	3	314	junction_3	44.285296657017	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964831	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788
ES.32967.2	chr8	+	2888	9	NNC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	123.496900264743	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTTTGTCTACTTCC	NA	False	NA	20	True	AATAAA	-14	NA	53964748	53976454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53974597
ES.32967.3	chr8	+	1250	9	NIC	ENSMUSG00000031521.6	novel	2250	10	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	3	23	junction_6	114.178314490975	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964753	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
ES.32967.4	chr8	+	1657	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	-8	-468	-8	385	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGTGTTGAGTTGTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	53964753	53976841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ES.32967.5	chr8	+	4455	7	NIC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	32	-14	intron_retention	FALSE	canonical	3	314	junction_3	37.0333933392853	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTAATGTTATTTCT	NA	False	NA	8	True	AATAAA	-2	NA	53964793	53976442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53973380_53974084
ES.32967.6	chr8	+	3519	7	NIC	ENSMUSG00000031521.6	novel	2250	10	NA	NA	-34	0	intron_retention	FALSE	canonical	3	314	junction_3	37.993054920896	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964798	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53973380_53974084_53974219_53976210
ES.32967.8	chr8	+	1168	9	NNC	ENSMUSG00000031521.6	novel	2250	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	124.13343375175	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964817	53976456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976250
ES.32967.9	chr8	+	1195	9	NNC	ENSMUSG00000031521.6	novel	1181	9	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.481415759778	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTGTCTACTTCCT	NA	False	NA	21	True	AATAAA	-15	NA	53964817	53976455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972015_53973271_53973380_53974084_53974219_53976210
ES.32968.1	chr8	+	3286	1	Antisense	novelGene_ENSMUSG00000039396.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGATTTGCACGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	54040156	54043442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_54040200_54043400
ES.32969.1	chr8	-	1840	8	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.159441935273	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092024	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54040363_54041959_54042135_54052133_54052555_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.10	chr8	-	3430	1	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	7426	5062	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCATCTATCCGGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	54057038	54053608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54053600_54057000
ES.32969.11	chr8	-	1791	5	ISM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	83	19446	-16	2	5prime_fragment	FALSE	canonical	3	34	junction_3	2.95803989154981	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54092017	54059347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.2	chr8	-	2429	1	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	2310	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54042330	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54039900_54042300
ES.32969.3	chr8	-	6714	9	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	-48	0	intron_retention	FALSE	canonical	3	32	junction_3	4.44409720865779	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092049	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.4	chr8	-	3721	3	ISM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	36882	0	9246	0	intron_retention	FALSE	canonical	3	42	junction_1	1	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54055218	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_54040363_54041959_54042135_54052133
ES.32969.5	chr8	-	2228	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	25	0	25	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092075	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.6	chr8	-	2016	9	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	12.6268562991744	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092030	54039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.7	chr8	-	2025	9	NIC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	12.941575445053	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTCTTTTGTAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	54092044	54039903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54040363_54041959_54042135_54052133_54052555_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.32969.8	chr8	-	6540	5	NNC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	4850	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	17.6281025638042	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTCTTTTGTAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	54059614	54039903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054593_54054736
ES.32969.9	chr8	-	8030	9	NNC	ENSMUSG00000039396.12	novel	2253	10	NA	NA	13	-6	intron_retention	TRUE	non_canonical	0	0	junction_4	13.2570735835629	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTTGGTCTTTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	54091988	54039907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054577_54054721_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ES.3297.1	chr10	+	3485	8	Intergenic	novelGene_2561	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTATGCTCCCAGACCA	6392	False	NA	NA	False	NA	NA	NA	79966581	79976190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79969018_79970392_79970603_79970951_79971083_79971210_79971379_79972181_79972331_79972497_79972581_79972709_79972772_79975944
ES.3297.10	chr10	+	841	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1166.91397378822	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4501	False	NA	13	True	ATTAAA	-12	NA	79978204	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79978441_79979665_79979820_79981052_79981115_79981256
ES.3297.11	chr10	+	2032	3	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1210	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTCTGTTTCTAACT	4509	False	NA	16	True	ATTAAA	-15	NA	79978212	79981648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79979289_79980577_79981142_79981256
ES.3297.12	chr10	+	860	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1166.91397378822	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4512	False	NA	13	True	ATTAAA	-12	NA	79978215	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79978441_79979665_79979820_79981052_79981149_79981260
ES.3297.13	chr10	+	755	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	1150.6179016318	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4521	False	NA	13	True	ATTAAA	-12	NA	79978224	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79978441_79979758_79979820_79981052_79981142_79981256
ES.3297.14	chr10	+	3304	2	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	23	-1	intron_retention	FALSE	canonical	3	2420	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4523	False	NA	13	True	ATTAAA	-12	NA	79978226	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79981142_79981256
ES.3297.2	chr10	+	2890	10	Intergenic	novelGene_2562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTATGCTCCCAGACCA	6392	False	NA	NA	False	NA	NA	NA	79966581	79976190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79968085_79968837_79969018_79970392_79970603_79970951_79971083_79971210_79971379_79972181_79972331_79972709_79972771_79972873_79973016_79973120_79973222_79975945
ES.3297.3	chr10	+	2320	11	Intergenic	novelGene_2563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	7019	False	NA	NA	False	NA	NA	NA	79967208	79976167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79968085_79968838_79969018_79970392_79970603_79970951_79971083_79971210_79971379_79972181_79972331_79972497_79972581_79972709_79972771_79972873_79973016_79973120_79973228_79975953
ES.3297.4	chr10	+	3153	6	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	59	0	intron_retention	FALSE	canonical	2	3	junction_1	1202.29430673192	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	821	False	NA	20	True	ATTAAA	-19	NA	79974524	79981652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79974690_79975538_79975760_79976312_79978441_79979665_79979820_79981052_79981142_79981256
ES.3297.5	chr10	+	1504	7	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	104	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1227.50280606151	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAACTGAGTGTTCTGTT	866	False	NA	9	True	ATTAAA	-8	NA	79974569	79981641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79974690_79975538_79975760_79976312_79976381_79977973_79978441_79979665_79979820_79981052_79981142_79981256
ES.3297.7	chr10	+	2167	3	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	2420	junction_2	8	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4435	False	NA	13	True	ATTAAA	-12	NA	79978138	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79978441_79979665_79981142_79981256
ES.3297.8	chr10	+	791	3	FSM	ENSMUSG00000003072.16	ENSMUST00000105366.2	781	3	-15	5	-15	-5	multi-exon	FALSE	canonical	3	26	junction_2	1205	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAACTGAGTGTTCTGTT	4485	False	NA	9	True	ATTAAA	-8	NA	79978188	79981641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79978441_79979665_79979820_79981256
ES.3297.9	chr10	+	2104	3	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	2420	junction_2	46.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	4490	False	NA	13	True	ATTAAA	-12	NA	79978193	79981645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_79979820_79981052_79981142_79981256
ES.32970.1	chr8	-	131	1	Intergenic	novelGene_26914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	54466866	54466735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_54466700_54466900
ES.32971.1	chr8	-	5344	2	Intergenic	novelGene_26915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCCTACTTCAGACTGT	653	False	NA	NA	False	ATTAAA	-20	NA	54529326	54523890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_54526356_54526447
ES.32972.1	chr8	+	2341	7	NIC	ENSMUSG00000031520.7	novel	2449	7	NA	NA	-660	-647	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	19.6044212700435	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAAGTTCAGTCTT	361	False	NA	NA	False	AATAAA	-17	NA	54529980	54639484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_54530961_54609992_54610195_54612448_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ES.32972.2	chr8	+	3611	1	Genic_Genomic	ENSMUSG00000031520.7	novel	NA	NA	NA	NA	-473	-88301	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACAGGCTTCTATGGGA	548	False	NA	NA	False	NA	NA	NA	54530167	54533778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_54530200_54533800
ES.32972.3	chr8	+	2263	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-461	647	-461	-647	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAAGTTCAGTCTT	560	False	NA	NA	False	AATAAA	-17	NA	54530179	54639484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ES.32972.4	chr8	+	2127	8	NNC	ENSMUSG00000031520.7	novel	2449	7	NA	NA	-402	-647	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	18.4678429842198	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAAGTTCAGTCTT	619	False	NA	NA	False	AATAAA	-17	NA	54530238	54639484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_54530961_54609992_54610195_54612327_54612372_54612448_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ES.32972.5	chr8	+	2861	1	Intergenic	novelGene_26917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTACCCGTGGT	3662	False	NA	NA	False	NA	NA	NA	54575111	54577972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_54575100_54578000
ES.32973.1	chr8	-	177	1	Intergenic	novelGene_26916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	54534842	54534665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_54534700_54534800
ES.32974.1	chr8	-	182	1	Intergenic	novelGene_26918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTGCTAGTG	NA	False	NA	NA	False	NA	NA	NA	54862022	54861840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_54861800_54862000
ES.32975.1	chr8	-	3775	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	2	311	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTACCCTGTACGCTAT	NA	False	NA	NA	False	NA	NA	NA	54983031	54973156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.10	chr8	-	3219	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCCAGGTTTATGTGTT	NA	False	NA	-7	True	AATAAA	-35	NA	54983006	54973470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975809_54976025_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.11	chr8	-	3242	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	-10	True	AATAAA	-32	NA	54983020	54973473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975743_54975947_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.13	chr8	-	3278	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	39	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	-10	True	AATAAA	-32	NA	54982994	54973473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974605_54974747_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.16	chr8	-	2776	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	1583	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	433.669444969322	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	False	NA	-10	True	AATAAA	-32	NA	54981450	54973473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974194_54974641_54976431_54977975_54978092_54979485_54979561_54981374
ES.32975.18	chr8	-	3399	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	1	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983032	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981420_54981451_54982797
ES.32975.19	chr8	-	3283	7	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	466.561684620111	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983006	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974635_54974736_54975841_54975878_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.2	chr8	-	3507	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	-36	5	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATGTGTTTTTGTGAA	NA	False	NA	1	True	AATAAA	-43	NA	54983069	54973462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.20	chr8	-	3465	4	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	16	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.247935941651	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983017	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54981268_54981451_54982797
ES.32975.21	chr8	-	3291	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	67	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54982966	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974280_54974371_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.22	chr8	-	3424	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	28	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	423.496753234308	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983005	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981368_54981451_54982797
ES.32975.23	chr8	-	3326	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	28	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983005	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974112_54974207_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.24	chr8	-	3341	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	41	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54982992	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975815_54975882_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.25	chr8	-	2856	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983006	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975205_54975771_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.26	chr8	-	3308	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	26	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983007	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975388_54975503_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.27	chr8	-	2975	3	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	4942	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	497.5	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54978091	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974112_54974199_54976431_54977975
ES.32975.28	chr8	-	3388	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	17	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54983016	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975790_54975834_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.3	chr8	-	2820	2	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	6648	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	883	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	54976385	54973467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54973842_54973939
ES.32975.30	chr8	-	3339	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	41	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54982992	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974202_54974271_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.31	chr8	-	3383	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	41	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	433.669444969322	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATTTTAAAGACTTCC	NA	False	NA	-20	True	AATAAA	-44	NA	54982992	54973483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981421_54982793
ES.32975.33	chr8	-	3111	7	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	29	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	466.561684620111	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCATTTTAAAGACTTC	NA	False	NA	-21	True	AATAAA	-43	NA	54983004	54973484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975081_54975135_54975694_54975947_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.34	chr8	-	3678	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	8	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	423.064046569784	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCATTTTAAAGA	NA	False	NA	-25	True	AATAAA	-39	NA	54983025	54973488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979655_54981227_54981451_54982797
ES.32975.36	chr8	-	6629	3	NIC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	24	-21	intron_retention	FALSE	canonical	3	952	junction_2	21.5	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCATTTTAAAGA	NA	False	NA	-25	True	AATAAA	-39	NA	54983009	54973488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54976431_54977975_54981451_54982797
ES.32975.37	chr8	-	5230	4	NIC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	29	-21	intron_retention	FALSE	canonical	3	952	junction_3	18.3726850393609	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCATTTTAAAGA	NA	False	NA	-25	True	AATAAA	-39	NA	54983004	54973488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54976431_54977975_54978092_54979485_54981451_54982797
ES.32975.38	chr8	-	3342	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	23	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCATTTTAAAGA	NA	False	NA	-25	True	AATAAA	-39	NA	54983010	54973488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974120_54974199_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.39	chr8	-	3295	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	24	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	479.005052165423	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATGCATTTTAAAGA	NA	False	NA	-25	True	AATAAA	-39	NA	54983009	54973488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975935_54976057_54976431_54977975_54978092_54979485_54979563_54981379_54981451_54982797
ES.32975.4	chr8	-	3156	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	54983025	54973467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54974046_54974347_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.40	chr8	-	3339	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	16	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATGCATTTTAAAG	NA	False	NA	-26	True	AATAAA	-38	NA	54983017	54973489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54973851_54973939_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.41	chr8	-	2705	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATGCATTTTAAAG	NA	False	NA	-26	True	AATAAA	-38	NA	54983006	54973489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975100_54975811_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.43	chr8	-	3439	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	41	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	423.496753234308	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTTTTCTGAGTAAAA	NA	False	NA	-41	True	AATAAA	-23	NA	54982992	54973504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979506_54981268_54981451_54982797
ES.32975.44	chr8	-	3478	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	24	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	483.643422368174	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTTTTCTGAGTAAAA	NA	False	NA	-41	True	AATAAA	-23	NA	54983009	54973504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977215_54977289_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.46	chr8	-	3340	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	41	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGATTTTTTTTCTGA	NA	False	NA	-47	True	AATAAA	-17	NA	54982992	54973510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975124_54975165_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.47	chr8	-	3343	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGATTTTTTTTCTGA	NA	False	NA	-47	True	AATAAA	-17	NA	54983006	54973510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975083_54975135_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.48	chr8	-	3331	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	16	-119	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAATTCATAAAAATA	NA	False	NA	-123	True	NA	NA	NA	54983017	54973586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.49	chr8	-	2964	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	26	-476	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	879	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAGGAAAACAG	NA	False	NA	NA	False	NA	NA	NA	54983007	54973943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.50	chr8	-	1854	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	1	-1611	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTATTTGACATGAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	54983032	54975078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.51	chr8	-	2064	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	24	-1619	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	423.064046569784	863	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTAATTGTATTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	54983009	54975086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979655_54981227_54981451_54982797
ES.32975.52	chr8	-	1308	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	-4	-2162	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	844	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTTTCTTTGTGTATT	NA	False	NA	NA	False	TTTAAA	-39	NA	54983037	54975629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.53	chr8	-	1060	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	2	-2188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.150981318992	843	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGTGTATCTTTCAGT	NA	False	NA	NA	False	TTTAAA	-13	NA	54983031	54975655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54975732_54975947_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.54	chr8	-	687	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	-4	-2783	at_least_one_novel_splicesite	FALSE	non_canonical	3	952	junction_4	25.3808490795718	823	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTCCCGGTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	54983037	54976250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.57	chr8	-	3854	3	NIC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	27	-2793	intron_retention	FALSE	canonical	3	952	junction_2	21.5	822	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCATCTCATCTCTTCC	NA	False	NA	NA	False	ACTAAA	-37	NA	54983006	54976260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_54976431_54977975_54981451_54982797
ES.32975.6	chr8	-	3605	6	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	483.643422368174	884	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAGGTTTATGTGTTT	NA	False	NA	-6	True	AATAAA	-36	NA	54983007	54973469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977215_54977383_54977975_54978092_54979485_54979561_54981374_54981451_54982797
ES.32975.7	chr8	-	3663	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	423.064046569784	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAGGTTTATGTGTTT	NA	False	NA	-6	True	AATAAA	-36	NA	54983032	54973469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979655_54981268_54981451_54982797
ES.32975.9	chr8	-	3594	5	NNC	ENSMUSG00000054408.10	novel	3466	5	NA	NA	192	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	495.012626101598	884	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAGGTTTATGTGTTT	NA	False	NA	-6	True	AATAAA	-36	NA	54982841	54973469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_54976431_54977975_54978092_54979485_54979557_54981371_54981451_54982474
ES.32976.1	chr8	+	4946	1	Intergenic	novelGene_26919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	56000065	56005011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_56000100_56005000
ES.32977.1	chr8	+	173	1	Intergenic	novelGene_26920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	56366544	56366717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_56366500_56366700
ES.32978.1	chr8	+	4508	1	Intergenic	novelGene_26921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAATGAGTGGGCTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	56708613	56713121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_56708600_56713100
ES.32979.1	chr8	+	1763	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	-80	0	-80	0	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATTGCCTATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	56747539	56774078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ES.32979.2	chr8	+	1774	8	NNC	ENSMUSG00000031613.10	novel	1683	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.73416935293301	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCACATAAATTGCCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	56747619	56774073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56769273_56769370_56770784_56770862_56772027_56772192_56773092
ES.32979.3	chr8	+	3310	3	ISM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	1	19629	1	-19629	5prime_fragment	FALSE	canonical	3	14	junction_2	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56747620	56754449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_56747748_56747973_56748098_56751390
ES.32979.4	chr8	+	1744	7	NNC	ENSMUSG00000031613.10	novel	1683	7	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.18021974284601	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATTGCCTATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	56747681	56774078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_56747871_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ES.32979.5	chr8	+	3894	1	NIC	ENSMUSG00000031613.10	novel	1683	7	NA	NA	2962	-19603	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCATCACCTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	56750581	56754475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_56750600_56754500
ES.32979.6	chr8	+	5170	3	ISM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	19223	-1	19223	1	3prime_fragment	FALSE	canonical	3	14	junction_1	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGCCTATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56766842	56774079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_56770862_56772027_56772192_56773092
ES.3298.1	chr10	+	3594	8	NNC	ENSMUSG00000035621.14	novel	3597	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	5.84144237150311	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTGCCCCTGGCTGTT	NA	False	NA	24	True	AATAAA	-16	NA	79984105	79994201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990167_79990307_79990967_79991241_79992198
ES.3298.3	chr10	+	3152	9	FSM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	2	573	2	-572	multi-exon	FALSE	canonical	3	9	junction_8	4.11551940828858	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTGTCTAGACTCCA	NA	False	NA	NA	False	GATAAA	-29	NA	79984107	79993629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.4	chr10	+	3725	9	FSM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	2	0	2	0	multi-exon	FALSE	canonical	3	9	junction_8	4.11551940828858	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGCCCCTGGCTGTTC	NA	False	NA	25	True	AATAAA	-17	NA	79984107	79994202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.5	chr10	+	3580	8	NNC	ENSMUSG00000035621.14	novel	835	4	NA	NA	-357	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.80336051416609	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTTGCCCCTGGCTG	705	False	NA	22	True	AATAAA	-14	NA	79985362	79994199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79985426_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.6	chr10	+	2976	7	ISM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	1394	559	-220	-559	3prime_fragment	FALSE	canonical	3	9	junction_6	4.59770474137791	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCACCTGTCCACGGTT	842	False	NA	NA	False	GATAAA	-42	NA	79985499	79993642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.7	chr10	+	2255	8	ISM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	1728	1076	114	-1075	3prime_fragment	FALSE	canonical	3	9	junction_7	4.13052351280027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAGCTGAAGCAAGTG	1176	False	NA	NA	False	NA	NA	NA	79985833	79993126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.8	chr10	+	3354	7	ISM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	2189	580	4	-579	3prime_fragment	FALSE	canonical	3	9	junction_6	4.45034330760623	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGTCCATGTTGTCTA	1637	False	NA	NA	False	GATAAA	-22	NA	79986294	79993622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ES.3298.9	chr10	+	1332	4	ISM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	5559	1389	2593	-1389	3prime_fragment	FALSE	canonical	3	9	junction_3	3.68178700572909	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCATAACCCAATTCAG	1028	False	NA	NA	False	NA	NA	NA	79989664	79992812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_79989968_79990164_79990307_79990967_79991241_79992198
ES.32980.1	chr8	+	1995	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	25	1551	6	-5	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCAGTGTTAACTAT	NA	False	NA	NA	False	AATAAA	-43	NA	57004149	57045423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ES.32980.2	chr8	+	1930	5	ISM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	26	2796	7	-330	5prime_fragment	FALSE	canonical	3	53	junction_4	9.12414379544733	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTTCGGAATGT	NA	False	NA	NA	False	AATAAA	-11	NA	57004150	57044178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092
ES.32980.3	chr8	+	1664	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	26	1881	7	-335	multi-exon	FALSE	canonical	3	53	junction_4	8.56504524214554	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGTTTGGAAATTTAT	NA	False	NA	NA	False	ACTAAA	-19	NA	57004150	57045093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ES.32980.4	chr8	+	1096	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	68	2407	49	59	multi-exon	FALSE	canonical	3	53	junction_4	8.56504524214554	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACGCGCCGTGCTGCTC	NA	False	NA	NA	False	AATAAA	-24	NA	57004192	57044567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ES.32980.6	chr8	+	1467	6	NNC	ENSMUSG00000038206.14	novel	3571	6	NA	NA	13752	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.4115623522451	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGTATTTACTTCCTT	NA	False	NA	80	True	AATAAA	-16	NA	57017895	57045396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57017930_57018773_57018838_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ES.32981.1	chr8	-	7422	2	NIC	ENSMUSG00000038215.16	novel	1204	10	NA	NA	555	1092	intron_retention	FALSE	canonical	3	199	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTCTCTGTCCTCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	56991147	56983464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56985550_56985810
ES.32981.10	chr8	-	1473	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	51.662849321345	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003896	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003798
ES.32981.11	chr8	-	2506	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	2	junction_10	52.1767189462887	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003896	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002765
ES.32981.12	chr8	-	2953	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_6	60.3841866716775	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003853	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995118_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097
ES.32981.13	chr8	-	1859	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	61.7591964577539	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003903	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002259_57002420_57003579
ES.32981.14	chr8	-	1619	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	54.5031654247927	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003907	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003722
ES.32981.15	chr8	-	1510	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-19	-2	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003857	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ES.32981.16	chr8	-	1495	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	26	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	68.6251411656107	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003808	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003579
ES.32981.18	chr8	-	1723	13	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	66.3278892238317	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003851	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002259_57002420_57003097_57003157_57003722
ES.32981.19	chr8	-	2673	12	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	66.6188120256019	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGTATATGTGCCGAT	NA	False	NA	-8	True	AATAAA	-15	NA	57003903	56984559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_56984768_56985511_56985551_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002259_57002420_57002765
ES.32981.2	chr8	-	2352	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	5	intron_retention	FALSE	canonical	2	2	junction_11	61.7591964577539	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGCCGATTTTCTCTT	NA	False	NA	0	True	AATAAA	-23	NA	57003907	56984551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002259_57002420_57003097
ES.32981.20	chr8	-	4205	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	2	junction_10	64.7005409560075	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGTATATGTGCCGAT	NA	False	NA	-8	True	AATAAA	-15	NA	57003896	56984559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57002259_57002420_57003097
ES.32981.3	chr8	-	1712	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	-17	-5	-2	5	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGCCGATTTTCTCTT	NA	False	NA	0	True	AATAAA	-23	NA	57003909	56984551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
ES.32981.4	chr8	-	2555	9	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	1	4	intron_retention	FALSE	canonical	3	61	junction_8	25.5831976109321	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGCCGATTTTCTCT	NA	False	NA	-1	True	AATAAA	-22	NA	57003891	56984552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ES.32981.5	chr8	-	2811	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-445	4	intron_retention	FALSE	canonical	3	38	junction_10	43.2676553559353	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGCCGATTTTCTCT	NA	False	NA	-1	True	AATAAA	-22	NA	57004527	56984552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097
ES.32981.6	chr8	-	4381	9	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	61	junction_8	42.39914503855	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003891	56984556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ES.32981.7	chr8	-	1584	11	NNC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.6924093205084	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003846	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000502_57003579
ES.32981.8	chr8	-	3426	10	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	61	junction_9	40.0484274748694	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003901	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ES.32981.9	chr8	-	9231	7	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	61	junction_6	28.852594722524	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTATATGTGCCGATT	NA	False	NA	-7	True	AATAAA	-16	NA	57003851	56984558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
ES.32982.1	chr8	-	927	1	Intergenic	novelGene_26922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGGATCATGTGTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	57019973	57019046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_57019000_57020000
ES.32983.1	chr8	+	173	1	Intergenic	novelGene_26923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	57079834	57080007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_57079800_57080000
ES.32984.1	chr8	+	121	1	Intergenic	novelGene_26924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	57264397	57264518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_57264400_57264500
ES.32985.1	chr8	+	1851	2	FSM	ENSMUSG00000038193.5	ENSMUST00000040104.5	2351	2	396	104	396	-104	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTTTACATGGGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	57774413	57777564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57775497_57776796
ES.32986.1	chr8	+	1240	3	NNC	ENSMUSG00000109629.2	novel	704	4	NA	NA	7701	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTGAGAGGTATTTGT	NA	False	NA	NA	False	AATATA	-15	NA	57863839	57868112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57864713_57867131_57867314_57867927
ES.32987.1	chr8	+	177	1	Intergenic	novelGene_26925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	57903538	57903715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_57903500_57903700
ES.32988.1	chr8	+	157	1	Intergenic	novelGene_26926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	57916551	57916708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_57916600_57916700
ES.32989.1	chr8	+	3357	7	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	-103	1285	intron_retention	FALSE	canonical	1	3	junction_1	3402.67780578767	1414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57940984	57967528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57941103_57943373_57943502_57959561_57959836_57963795_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.11	chr8	+	657	3	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	2205	1384	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	59	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAGTCTATTGGTTTT	NA	False	NA	13	True	NA	NA	NA	57943292	57963295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57943502_57959561_57959836_57963121
ES.32989.12	chr8	+	3908	2	ISM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	2242	-1386	2242	1386	3prime_fragment	FALSE	canonical	3	149	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCTATTGGTTTTGT	NA	False	NA	15	True	NA	NA	NA	57943329	57963297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_57943502_57959561
ES.32989.13	chr8	+	2764	2	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	2269	-13444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGCCCCCATAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	57943356	57946321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57943910_57944110
ES.32989.14	chr8	+	1431	6	Fusion	ENSMUSG00000054717.8_ENSMUSG00000096917.3	novel	2618	3	NA	NA	2280	1284	multi-exon	FALSE	canonical	3	135	junction_2	3291.53937239098	1414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTTGTATTAATTT	NA	False	NA	8	True	AATAAA	-19	NA	57943367	57967527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57943502_57959561_57959836_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.15	chr8	+	6641	2	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	2287	-9549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTTAAAAGGTTACAGG	NA	False	NA	NA	False	NA	NA	NA	57943374	57950216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57943910_57944110
ES.32989.16	chr8	+	3782	1	Genic_Genomic	ENSMUSG00000096917.3	novel	NA	NA	NA	NA	666	1385	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGTCTATTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	57959514	57963296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_57959500_57963300
ES.32989.17	chr8	+	4999	4	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	2780	1280	intron_retention	FALSE	canonical	3	6480	junction_3	312.16377467961	1403	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGTGTTTGTATTA	NA	False	NA	4	True	AATAAA	-15	NA	57961628	57967523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.18	chr8	+	4506	4	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-1309	0	intron_retention	FALSE	canonical	3	6480	junction_3	312.16377467961	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGTTCTGTTTTGCTT	NA	False	NA	5	True	AAAACA	-17	NA	57963631	57969033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.2	chr8	+	2626	3	FSM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	-11	3	-11	-3	multi-exon	FALSE	canonical	3	58	junction_1	45.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGTGCTGCTTACATA	NA	False	NA	NA	False	AATAAA	-17	NA	57941076	57961908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57941228_57943373_57943502_57959561
ES.32989.20	chr8	+	1249	5	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-73	1278	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	2969.23201350113	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964867	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_57965040_57965548_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.21	chr8	+	1175	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-67	1278	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	2971.38809102749	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964873	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965040_57965616_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.22	chr8	+	1182	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-63	1278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2975.269063463	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964877	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965040_57965605_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.23	chr8	+	1236	4	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-38	1278	intron_retention	FALSE	canonical	3	4513	junction_1	1149.74267652472	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964902	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_57965040_57965608_57965783_57966095_57966499_57966999
ES.32989.24	chr8	+	2635	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-7	0	-7	0	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGTTCTGTTTTGCTT	NA	False	NA	5	True	AAAACA	-17	NA	57964933	57969033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.26	chr8	+	1439	4	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-6	1282	intron_retention	FALSE	canonical	3	4513	junction_1	1012.87347021564	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGTGTTTGTATTAAT	NA	False	NA	6	True	AATAAA	-17	NA	57964934	57967525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_57965040_57965608_57966242_57966323_57966499_57966999
ES.32989.28	chr8	+	1382	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	8	1238	8	-1238	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGAGTCGGGGTATG	NA	False	NA	NA	False	NA	NA	NA	57964948	57967795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.29	chr8	+	1013	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	23	1285	at_least_one_novel_splicesite	FALSE	canonical	3	391	junction_1	2806.70361589891	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57964963	57967528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965040_57965695_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.3	chr8	+	692	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	-9	1384	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	66.1782105798846	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAGTCTATTGGTTTT	NA	False	NA	13	True	NA	NA	NA	57941078	57963295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57941103_57943373_57943502_57959561_57959836_57963029
ES.32989.31	chr8	+	1072	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	33	1278	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3155.16433803376	1371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57964973	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966330_57966499_57966999
ES.32989.33	chr8	+	2805	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	66	-243	-1	243	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACCCCCTGGCTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	57965006	57969276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.35	chr8	+	1142	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	26	1278	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_1	2920.50820705918	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCATTGTGTTTGTAT	NA	False	NA	2	True	AATAAA	-13	NA	57965033	57967521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965163_57965612_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.36	chr8	+	1272	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	26	1285	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	2969.66322796037	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57965033	57967528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965282_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.39	chr8	+	932	4	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	285	1287	at_least_one_novel_splicesite	FALSE	canonical	3	397	junction_1	2947.39896632042	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTATTAATTTTTC	NA	False	NA	11	True	AATAAA	-22	NA	57965866	57967530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57965947_57966095_57966242_57966323_57966499_57966999
ES.32989.4	chr8	+	464	3	FSM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	4	2150	4	-4	multi-exon	FALSE	canonical	3	58	junction_1	45.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACACTCCTGCTTCTT	NA	False	NA	5	True	NA	NA	NA	57941091	57959761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_57941228_57943373_57943502_57959561
ES.32989.5	chr8	+	6765	7	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	6	1286	multi-exon	FALSE	canonical	3	58	junction_1	3025.11019083052	1414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57941093	57967529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57941228_57943373_57943502_57959561_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.6	chr8	+	712	4	NNC	ENSMUSG00000096917.3	novel	2618	3	NA	NA	6	1386	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	50.4799189997589	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCTATTGGTTTTGT	NA	False	NA	15	True	NA	NA	NA	57941093	57963297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_57941228_57943373_57943502_57959561_57959836_57963121
ES.32989.7	chr8	+	3734	9	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	7	1277	multi-exon	FALSE	canonical	0	0	junction_2	3209.05277837168	1414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGCATTGTGTTTGTA	NA	False	NA	1	True	AATAAA	-12	NA	57941094	57967520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57941228_57943373_57943502_57953381_57953650_57959561_57960507_57963795_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.8	chr8	+	2932	8	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	1467	1285	multi-exon	FALSE	canonical	2	5	junction_3	3168.69876080619	1414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57942554	57967528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57942817_57943373_57943502_57959561_57959836_57963795_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.32989.9	chr8	+	1597	7	Fusion	ENSMUSG00000096917.3_ENSMUSG00000054717.8	novel	2628	5	NA	NA	1558	1285	multi-exon	FALSE	canonical	3	25	junction_1	3377.28250800683	1414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTGTATTAATTTT	NA	False	NA	9	True	AATAAA	-20	NA	57942645	57967528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_57942817_57943373_57943502_57959561_57959836_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ES.3299.1	chr10	-	3263	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	12	-100	10	0	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAACCAACCC	9086	False	NA	94	True	NA	NA	NA	79975187	79966284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.11	chr10	-	4013	12	NNC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-541	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.9621189982819	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	7063	False	NA	-8	True	CATAAA	-11	NA	79977210	79966386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79975945_79976069_79976213
ES.3299.12	chr10	-	3941	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	10	junction_5	10.0492613818622	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9059	False	NA	-8	True	CATAAA	-11	NA	79975214	79966386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.13	chr10	-	3672	8	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_7	14.6133849743365	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGCTCTGGGTTT	9088	False	NA	-8	True	CATAAA	-11	NA	79975185	79966386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79974919
ES.3299.14	chr10	-	3226	10	NNC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-5	intron_retention	FALSE	canonical	0	0	junction_3	12.8101040367399	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATATTTGTTTGCTCTGGG	9088	False	NA	-11	True	CATAAA	-8	NA	79975185	79966389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79968086_79968838_79969020_79970394_79970478_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.15	chr10	-	3104	10	FSM	ENSMUSG00000035640.19	ENSMUST00000105369.8	3121	10	12	5	10	-5	multi-exon	FALSE	canonical	2	9	junction_6	10.6817023658263	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATATTTGTTTGCTCTGGG	9086	False	NA	-11	True	CATAAA	-8	NA	79975187	79966389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.16	chr10	-	1939	1	Antisense	novelGene_ENSMUSG00000035621.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTTCCTGTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	79984786	79982847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79982800_79984800
ES.3299.2	chr10	-	3982	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-27	0	intron_retention	FALSE	canonical	2	8	junction_5	10.4774890970011	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9047	False	NA	-6	True	CATAAA	-13	NA	79975226	79966384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.3	chr10	-	4108	9	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-1	intron_retention	FALSE	canonical	3	16	junction_8	7.964766161037	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	9088	False	NA	-7	True	CATAAA	-12	NA	79975185	79966385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.4	chr10	-	3221	11	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	10.5380263806844	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	9054	False	NA	-7	True	CATAAA	-12	NA	79975219	79966385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.5	chr10	-	3355	10	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	12	-1	intron_retention	FALSE	canonical	3	16	junction_9	8.743251365736	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	9088	False	NA	-7	True	CATAAA	-12	NA	79975185	79966385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.6	chr10	-	3189	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	-15	1	-15	-1	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	9059	False	NA	-7	True	CATAAA	-12	NA	79975214	79966385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ES.3299.9	chr10	-	3913	8	NNC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	-8129	-1	intron_retention	FALSE	canonical	0	0	junction_7	13.1117644635243	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGCTCTGGGTTTT	NA	False	NA	-7	True	CATAAA	-12	NA	79984798	79966385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972578_79972707_79972773_79972876_79973017_79984627
ES.32990.1	chr8	-	1221	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	-38	-5	-38	5	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGCCTGTTTATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	57940932	57935735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ES.32990.2	chr8	-	1081	4	NNC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	74	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	801.07802366561	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	98	True	AATAAA	-15	NA	57940820	57935739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57936085_57938075_57938175_57938543_57938670_57940309
ES.32990.3	chr8	-	3548	3	ISM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	-753	-1	-753	1	intron_retention	FALSE	canonical	3	1666	junction_1	39	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	False	NA	98	True	AATAAA	-15	NA	57941647	57935739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_57936085_57938075_57938175_57938543
ES.32990.4	chr8	-	3160	3	NIC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	9	0	intron_retention	FALSE	canonical	3	1617	junction_2	63.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTTCAGCCTGTTT	NA	False	NA	97	True	AATAAA	-14	NA	57940885	57935740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57938175_57938543_57938670_57940285
ES.32990.6	chr8	-	5149	1	NIC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	4	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCTGCTTCAGCCTGTT	NA	False	NA	96	True	AATAAA	-13	NA	57940890	57935741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57935700_57940900
ES.32991.1	chr8	-	157	1	Intergenic	novelGene_26927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	57955421	57955264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_57955300_57955400
ES.32992.1	chr8	-	1973	1	Antisense	novelGene_ENSMUSG00000054717.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGGTCCGCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	57965791	57963818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_57963800_57965800
ES.32993.1	chr8	+	218	1	FSM	ENSMUSG00000070025.9	ENSMUST00000145057.2	1005	1	965	-178	965	178	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATAAA	-12	NA	58004297	58004515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_58004300_58004500
ES.32994.1	chr8	-	3799	14	Fusion	ENSMUSG00000031608.14_ENSMUSG00000109899.2	novel	3413	12	NA	NA	-8	163	multi-exon	FALSE	canonical	0	0	junction_1	60.058945404302	234	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	58106074	57973027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_57973956_57975341_57975628_57978598_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.10	chr8	-	3950	12	NNC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.7864436822651	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106065	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57977170_57977404_57979286_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.12	chr8	-	4442	12	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.8620743913506	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106070	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979286_57984511_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.14	chr8	-	3646	9	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.9191168953012	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106068	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998702_57998834_58005477_58005645_58105886
ES.32994.15	chr8	-	4188	11	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.0589355741216	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106069	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.16	chr8	-	3900	10	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	54.7589555221476	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106069	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989797_57996005_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.17	chr8	-	4268	13	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.289954519871	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106072	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57977881_57977932_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.18	chr8	-	3853	10	NNC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.5441613206347	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106072	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979108_57989677_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.19	chr8	-	3892	9	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	73.1598207693267	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106074	57976861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57998702_57998834_58036800_58037262_58105886
ES.32994.2	chr8	-	4338	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-49	-876	-20	4	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTGCTTGTAATTA	NA	False	NA	1	True	AATAAA	-22	NA	58106086	57976857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.20	chr8	-	3659	10	NNC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.6862934072292	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTTTTCAGTGCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	58106066	57976862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996026_57998362_57998443_57998702_57998834_58105886
ES.32994.21	chr8	-	4198	11	NIC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-16	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.3508689100794	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGCTTTTCAGTGCTT	NA	False	NA	-6	True	AATAAA	-15	NA	58106082	57976864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.22	chr8	-	4411	13	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.0635216203987	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATAGCTTTTCAGTGC	NA	False	NA	-8	True	AATAAA	-13	NA	58106073	57976866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979286_57980057_57980153_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.23	chr8	-	3842	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-35	-394	-6	394	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGTAATTATTTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	58106072	57977339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.25	chr8	-	2898	8	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	0	18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	60.0972001792742	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGGTGAGCTGGGGC	NA	False	NA	NA	False	GATAAA	-37	NA	58106065	57977715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_58036800_58037262_58105886
ES.32994.26	chr8	-	2684	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	-37	766	-8	558	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCGTCTGTTACTCACA	NA	False	NA	NA	False	AATGAA	-12	NA	58106074	57978499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.27	chr8	-	2363	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	7	1943	7	253	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGTTTGGTTTTTTTT	NA	False	NA	-33	True	AATACA	-14	NA	58106058	57978804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.28	chr8	-	2202	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-13	2124	-12	72	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACATTATCATCTGCAG	NA	False	NA	NA	False	GATAAA	-13	NA	58106078	57978985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.29	chr8	-	174	1	Intergenic	novelGene_26928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAAACCTTACT	NA	False	NA	NA	False	NA	NA	NA	57979500	57979326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_57979300_57979500
ES.32994.3	chr8	-	4335	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	-19	-3	-18	3	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCAGTGCTTGTAATT	NA	False	NA	0	True	AATAAA	-21	NA	58106084	57976858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.30	chr8	-	176	1	Intergenic	novelGene_26929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATATTAGAGAATCCT	NA	False	NA	NA	False	AAAACA	-20	NA	57983461	57983285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_57983300_57983500
ES.32994.31	chr8	-	1084	3	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-3	-21678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAAATAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	58106069	58016706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_58017147_58036800_58037262_58105886
ES.32994.32	chr8	-	1888	1	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-45828	-40399	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCGTTCCGTGTATTC	NA	False	NA	NA	False	NA	NA	NA	58037315	58035427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_58035400_58037300
ES.32994.33	chr8	-	3715	1	Intergenic	novelGene_26930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCATTATTTACCAATC	NA	False	NA	NA	False	AAGAAA	-8	NA	58070778	58067063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58067100_58070800
ES.32994.34	chr8	-	783	1	Intergenic	novelGene_26931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCAAAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58072140	58071357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58071400_58072100
ES.32994.35	chr8	-	3206	1	Intergenic	novelGene_26932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTATTTTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	58084582	58081376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58081400_58084600
ES.32994.4	chr8	-	4269	13	NNC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.513396054895	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTCAGTGCTTGTAAT	NA	False	NA	-1	True	AATAAA	-20	NA	58106068	57976859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57976884_57976932_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.5	chr8	-	4140	11	NIC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	50.986370727872	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106074	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.6	chr8	-	3831	13	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.289954519871	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106034	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57977202_57977653_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.7	chr8	-	4157	12	NNC	ENSMUSG00000031608.14	novel	4313	12	NA	NA	-162	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.0649912217683	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106228	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58106206
ES.32994.8	chr8	-	4224	13	NNC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.513396054895	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106078	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_57978587_57978689_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ES.32994.9	chr8	-	3869	11	NIC	ENSMUSG00000031608.14	novel	3413	12	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	50.6782991032651	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTCAGTGCTTGTAA	NA	False	NA	-2	True	AATAAA	-19	NA	58106081	57976860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58105886
ES.32995.1	chr8	-	2603	2	Intergenic	novelGene_26933	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACATGGATTCTCTAAT	NA	False	NA	NA	False	AGTAAA	-25	NA	58185096	58182189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58184657_58184960
ES.32996.1	chr8	-	184	1	Intergenic	novelGene_26934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATGTACCTGTATCA	NA	False	NA	NA	False	NA	NA	NA	58214024	58213840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58213800_58214000
ES.32997.1	chr8	+	1093	3	Intergenic	novelGene_26935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58219275	58224131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_58219367_58220017_58220145_58223256
ES.32998.1	chr8	+	210	1	Intergenic	novelGene_26936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACCAGAGAATCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	58267650	58267860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_58267600_58267900
ES.32999.1	chr8	+	178	1	Intergenic	novelGene_26937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTATTTATGTATAGCA	NA	False	NA	NA	False	NA	NA	NA	58374093	58374271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_58374100_58374300
ES.33.1	chr1	-	4696	1	FSM	ENSMUSG00000090031.3	ENSMUST00000191825.2	5428	1	732	0	29	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCTGAAATCATTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	6284785	6280089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_6280100_6284800
ES.33.2	chr1	-	1626	1	FSM	ENSMUSG00000090031.3	ENSMUST00000191825.2	5428	1	733	3069	30	358	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGAAGCTTCGGGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	6284784	6283158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_6283200_6284800
ES.330.1	chr1	+	2232	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38149001	38151233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38149000_38151200
ES.3300.1	chr10	-	1555	7	Antisense	novelGene_ENSMUSG00000035621.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAGTTATCA	4257	False	NA	NA	False	NA	NA	NA	79991135	79985498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_79986148_79987211_79987299_79987493_79987556_79989422_79989551_79989646_79989963_79990161_79990304_79990964
ES.33000.1	chr8	-	176	1	Intergenic	novelGene_26938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAACTGTGAATTAT	NA	False	NA	NA	False	NA	NA	NA	58461646	58461470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_58461500_58461600
ES.33001.1	chr8	+	172	1	Intergenic	novelGene_26939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59122705	59122877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_59122700_59122900
ES.33002.1	chr8	-	181	1	Intergenic	novelGene_26940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60971183	60971002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_60971000_60971200
ES.33003.1	chr8	+	5930	1	Intergenic	novelGene_26941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCGTGTGATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	61053192	61059122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61053200_61059100
ES.33004.1	chr8	+	6313	3	FSM	ENSMUSG00000031647.11	ENSMUST00000160719.8	6335	3	18	4	18	-4	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGTCATGTGTCATA	NA	False	NA	NA	False	AATAAA	-12	NA	61085911	61129759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61086093_61109493_61109924_61124057
ES.33005.1	chr8	+	204	1	Intergenic	novelGene_26942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCGAATCGATCCATAC	7158	False	NA	NA	False	NA	NA	NA	61137695	61137899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61137700_61137900
ES.33006.1	chr8	-	103	1	Intergenic	novelGene_26943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGGTAGAGTACTTT	NA	False	NA	NA	False	NA	NA	NA	61307329	61307226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_61307200_61307300
ES.33007.1	chr8	+	1281	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	-88	-2	-55	2	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTCTTTCACT	NA	False	NA	24	True	AATAAA	-37	NA	61343396	61360616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.10	chr8	+	3888	6	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	724	junction_2	85.750801745523	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTCTAGTGTTTCTTT	NA	False	NA	20	True	AATAAA	-33	NA	61343472	61360612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61346734_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.11	chr8	+	1283	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	376.709685965201	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATACGGCTCTTCTAGT	NA	False	NA	12	True	AATAAA	-25	NA	61343475	61360604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61349984_61350078_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.12	chr8	+	1459	5	NNC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	460.269689964482	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343476	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61359473_61360370
ES.33007.13	chr8	+	1230	8	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	292.44095863219	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTAGTGTTTCTTTCAC	NA	False	NA	23	True	AATAAA	-36	NA	61343476	61360615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357152_61358581_61358755_61360370
ES.33007.14	chr8	+	1765	7	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	399.655963159427	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343476	61360613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61357033_61357122_61358581_61359473_61360370
ES.33007.15	chr8	+	842	6	NIC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	350.451480236566	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGCTCTTCTAGTGTT	NA	False	NA	15	True	AATAAA	-28	NA	61343476	61360607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.16	chr8	+	2806	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	0	1	0	-1	intron_retention	FALSE	canonical	3	724	junction_4	83.6827673751027	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343484	61360613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
ES.33007.17	chr8	+	638	5	NNC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	392.393536516595	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTTATAATACGGCT	NA	False	NA	4	True	AATAAA	-17	NA	61343486	61360596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61357033_61357122_61358581_61358755_61359405_61359473_61360370
ES.33007.18	chr8	+	1983	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	422.221931423511	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATACGGCTCTTCTAG	NA	False	NA	11	True	AATAAA	-24	NA	61343492	61360603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61349984_61350078_61353117_61353269_61357033_61357122_61358581_61359473_61360370
ES.33007.19	chr8	+	2349	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	26	junction_1	434.19120212183	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343493	61360614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581
ES.33007.2	chr8	+	2684	6	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	11	junction_4	344.040927797842	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGCTCTTCTAGTGTT	NA	False	NA	15	True	AATAAA	-28	NA	61343449	61360607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61357033_61357122_61358581
ES.33007.20	chr8	+	1289	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	410.158639278755	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343500	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61349984_61350078_61353117_61353269_61357033_61357152_61358581_61358755_61360370
ES.33007.21	chr8	+	570	4	NIC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	377.602966090045	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343507	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61349771_61349871_61358581_61358755_61360370
ES.33007.22	chr8	+	2978	7	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	400.743891614915	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343568	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61345602_61346734_61346895_61348494_61348685_61349771_61349871_61357033_61357122_61358581_61358755_61360370
ES.33007.23	chr8	+	5008	5	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	2523	-2	intron_retention	FALSE	canonical	3	724	junction_2	91.1574873501897	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTCTAGTGTTTCTTT	NA	False	NA	20	True	AATAAA	-33	NA	61346045	61360612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581
ES.33007.24	chr8	+	1099	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	3247	9	3209	-2	3prime_fragment	FALSE	canonical	3	724	junction_3	85.6361813461784	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61346731	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.25	chr8	+	221	1	Intergenic	novelGene_26944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGACTAGCATGA	NA	False	NA	NA	False	AATAAA	-19	NA	61356550	61356771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61356600_61356800
ES.33007.26	chr8	+	1444	1	FSM	ENSMUSG00000038005.16	ENSMUST00000211016.2	2641	1	1488	-291	1488	291	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCAGCTG	NA	False	NA	NA	False	AATAAA	-45	NA	61360552	61361996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61360600_61362000
ES.33007.3	chr8	+	2152	6	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	11	junction_3	337.286584375958	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343450	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61346734_61346895_61348494_61349871_61357033_61357122_61358581_61358755_61360370
ES.33007.4	chr8	+	615	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	388.477655585091	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343460	61360614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61357033_61357122_61358581_61358755_61360370
ES.33007.5	chr8	+	690	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	9	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	390.129038481714	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTTTCTTTCACTT	NA	False	NA	25	True	AATAAA	-38	NA	61343460	61360617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61346734_61346895_61358581_61358755_61360370
ES.33007.6	chr8	+	1012	7	FSM	ENSMUSG00000038005.16	ENSMUST00000149267.8	1000	7	-16	4	11	-4	multi-exon	FALSE	canonical	3	27	junction_2	318.3514829032	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATACGGCTCTTCTAG	NA	False	NA	11	True	AATAAA	-24	NA	61343462	61360603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61343571_61346734_61346895_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33007.7	chr8	+	3742	5	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	11	junction_2	373.465778218032	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTAGTGTTTCTTTC	NA	False	NA	21	True	AATAAA	-34	NA	61343468	61360613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61346734_61349871_61357033_61357122_61358581_61358755_61360370
ES.33007.8	chr8	+	1189	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	-7	11135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	289.417707431664	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTAGACATCATCACAAG	NA	False	NA	NA	False	TTTAAA	-2	NA	61343471	61372840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370_61360580_61372820
ES.33007.9	chr8	+	745	5	NIC	ENSMUSG00000038005.16	novel	1000	7	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	382.667610335654	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	False	NA	13	True	AATAAA	-26	NA	61343472	61360605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ES.33008.1	chr8	+	6611	1	Antisense	novelGene_ENSMUSG00000004319.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGAACACTGCATGGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	61426781	61433392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_61426800_61433400
ES.33009.1	chr8	-	6120	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-33	-1988	14	454	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCATCTCTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	61436306	61362968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.10	chr8	-	5521	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.4484482900287	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436319	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376001_61376158_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.11	chr8	-	5165	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10222	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGCTTTTAATTG	NA	False	NA	-3	True	ATTAAA	-16	NA	61418489	61363424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.12	chr8	-	4478	8	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10277	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.872517362554	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGCTTTTAATTG	NA	False	NA	-3	True	ATTAAA	-16	NA	61386271	61363424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372581_61375890_61376223_61379337_61379521_61380265_61380453_61382104_61382651_61383714_61383796_61386114
ES.33009.13	chr8	-	4401	11	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	92.7744037975993	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436289	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372456_61382528_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.14	chr8	-	5038	4	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	26364	3	-5909	-3	3prime_fragment	FALSE	canonical	3	202	junction_1	29.0095769627128	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61381903	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265
ES.33009.15	chr8	-	5751	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.3858480988246	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436319	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61367611_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.16	chr8	-	5753	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.5041226542358	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436344	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367810_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.17	chr8	-	5351	12	NNC	ENSMUSG00000004319.16	novel	5518	12	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.3951573515575	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436342	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382479_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.18	chr8	-	5821	15	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.1387241799763	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436301	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61399338_61399426_61428765_61428942_61435809
ES.33009.19	chr8	-	5801	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	86.2665471649545	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436300	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61399338_61399483_61428765_61428942_61435809
ES.33009.2	chr8	-	3976	4	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	31516	-1960	-272	453	3prime_fragment	FALSE	canonical	3	31	junction_1	98.2886904311308	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCATCTCTCCAGC	5153	False	NA	NA	False	NA	NA	NA	61376266	61362969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823
ES.33009.20	chr8	-	5567	13	NNC	ENSMUSG00000004319.16	novel	5518	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.3858480988246	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436334	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367810_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.21	chr8	-	5973	15	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	98.1387241799763	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436321	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61399263_61399483_61428765_61428942_61435809
ES.33009.22	chr8	-	4767	10	NIC	ENSMUSG00000004319.16	novel	5518	12	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	77.9650127292784	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436319	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61372373_61372591_61375823_61376223_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.23	chr8	-	5645	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	71.0021517670807	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436270	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394467_61428765_61428942_61435809
ES.33009.24	chr8	-	5882	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.3430582756515	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGGCTTTTAATT	NA	False	NA	-4	True	ATTAAA	-15	NA	61436319	61363425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367656_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.25	chr8	-	5339	13	NNC	ENSMUSG00000004319.16	novel	3768	13	NA	NA	-10218	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	93.5142220318504	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	61418485	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61379337_61379521_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.26	chr8	-	5356	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.2335621439231	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	61436317	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61365151_61365288_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.27	chr8	-	5489	13	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	110	-7	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	85.2074266455428	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	61436163	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367713_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.28	chr8	-	5384	3	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	30057	7	-2216	-7	3prime_fragment	FALSE	canonical	3	202	junction_1	19	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	3209	False	NA	-8	True	ATTAAA	-11	NA	61378210	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61366210_61372373_61372591_61375823
ES.33009.29	chr8	-	5108	12	NNC	ENSMUSG00000004319.16	novel	5518	12	NA	NA	-20	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.3951573515575	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	61436298	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382284_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.3	chr8	-	5720	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-72	-1549	-11	15	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCACCTGTACCAACAGCT	NA	False	NA	14	True	ATTAAA	-33	NA	61436345	61363407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.30	chr8	-	5535	15	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.5494315919829	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTGGTTTGGCTTTT	NA	False	NA	-8	True	ATTAAA	-11	NA	61436279	61363429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61365996_61366179_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61399338_61399426_61428765_61428942_61435809
ES.33009.33	chr8	-	5782	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	84.6366406867945	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTGTGGTTTGGCTTT	NA	False	NA	-9	True	ATTAAA	-10	NA	61436347	61363430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367870_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.34	chr8	-	5274	11	NIC	ENSMUSG00000004319.16	novel	5518	12	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.2347627463037	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTGTGGTTTGGCTTT	NA	False	NA	-9	True	ATTAAA	-10	NA	61436285	61363430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61372373_61372591_61375823_61376223_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.35	chr8	-	4967	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	13399	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.5509308311083	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTGTGGTTTGGCTTT	NA	False	NA	-9	True	ATTAAA	-10	NA	61394383	61363430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61382725_61382773_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290
ES.33009.36	chr8	-	3224	3	NNC	ENSMUSG00000004319.16	novel	2954	4	NA	NA	-10277	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTGGTTTGGCTT	NA	False	NA	-10	True	ATTAAA	-9	NA	61418544	61363431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61418315
ES.33009.37	chr8	-	4984	12	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	97.3189354987588	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTGGTTTGGCTT	NA	False	NA	-10	True	ATTAAA	-9	NA	61436279	61363431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.39	chr8	-	5755	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.5041226542358	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTGGTTTGGCTT	NA	False	NA	-10	True	ATTAAA	-9	NA	61436279	61363431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367737_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.4	chr8	-	4532	10	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9093870082938	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436317	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366181_61382417_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.41	chr8	-	5623	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.3668048885698	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGTGTGGTTTGGCTT	NA	False	NA	-10	True	ATTAAA	-9	NA	61436279	61363431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372380_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.42	chr8	-	5346	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-44	-1127	3	65	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTTTGGAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	61436317	61363829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.43	chr8	-	5115	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	-8	411	-8	61	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCAGAGGTTTGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	61436342	61363833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.44	chr8	-	5210	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-46	-1065	1	3	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTATCTGATGTGTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	61436319	61363891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.46	chr8	-	4263	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-47	-41	0	14	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTTTTTTAATAGAC	NA	False	NA	NA	False	CATAAA	-18	NA	61436320	61364915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.47	chr8	-	4112	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-13	12	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTTTTAATAG	NA	False	NA	NA	False	TATAAA	-44	NA	61436347	61364917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.48	chr8	-	3669	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10220	11	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGACTTTTTTTAATA	NA	False	NA	NA	False	TATAAA	-43	NA	61418487	61364918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.49	chr8	-	4001	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	17	1500	3	7	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATGTGACTTTTTTT	NA	False	NA	NA	False	TATAAA	-39	NA	61436317	61364922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.5	chr8	-	5538	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436354	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.50	chr8	-	4197	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-74	-24	-13	-3	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTACCTTTTTAATGT	NA	False	NA	NA	False	ATTAAA	-38	NA	61436347	61364932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.51	chr8	-	4008	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	224	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.3020314277412	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCACATAAATAATTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	61436049	61364945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382773_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.52	chr8	-	3908	12	NIC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.4227371281982	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGTTAATATTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	61436269	61364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61372373_61372591_61375823_61376223_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.53	chr8	-	4060	13	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.3858480988246	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGTTAATATTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	61436285	61364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367737_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.54	chr8	-	3952	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.3020314277412	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGTTAATATTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	61436298	61364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382479_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.55	chr8	-	4133	13	NNC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	83.8859592939526	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATCAGTTAATATTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	61436302	61364958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61379337_61379521_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.56	chr8	-	3695	13	NNC	ENSMUSG00000004319.16	novel	3768	13	NA	NA	-10215	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	90.9308345208965	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCAGATCAGTTAATA	NA	False	NA	NA	False	ATTAAA	-7	NA	61418482	61364963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.57	chr8	-	3968	14	NNC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-1	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.417242685346	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTATATTTTTAT	NA	False	NA	NA	False	ACTAAA	-29	NA	61436279	61364997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382479_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.58	chr8	-	3537	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-47	609	0	-609	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAACCTCTCTGGTGT	NA	False	NA	NA	False	NA	NA	NA	61436320	61365565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.59	chr8	-	2965	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-7	-1046	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATACAAGGCGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	61436285	61366002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.6	chr8	-	5255	13	NNC	ENSMUSG00000004319.16	novel	3768	13	NA	NA	-10234	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	90.9308345208965	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61418501	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.60	chr8	-	2903	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	29	2586	15	-1052	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAAATACAAGGCG	NA	False	NA	NA	False	NA	NA	NA	61436305	61366008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.61	chr8	-	2577	12	NNC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	-10228	-1062	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	65.6371191092257	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	61418495	61366018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61418315
ES.33009.62	chr8	-	5340	12	ISM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-30	4953	17	-4953	5prime_fragment	FALSE	canonical	3	96	junction_10	52.9808947320784	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCATTGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	61436303	61369909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.33009.63	chr8	-	1707	4	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	25193	7025	-6595	-6998	internal_fragment	FALSE	canonical	3	224	junction_3	20.4015249974658	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCCTTCTTACCTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	61382589	61371954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61372591_61375823_61376223_61380265_61380453_61382104
ES.33009.64	chr8	-	3382	7	NIC	ENSMUSG00000004319.16	novel	4099	13	NA	NA	7397	28	intron_retention	FALSE	canonical	3	96	junction_6	50.1287231922866	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGTTTTACTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	61428876	61381300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765
ES.33009.65	chr8	-	668	1	Intergenic	novelGene_26945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATTTTGTAGCATGT	NA	False	NA	NA	False	AATAAA	-14	NA	61425446	61424778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_61424800_61425400
ES.33009.7	chr8	-	5489	1	NIC	ENSMUSG00000004319.16	novel	5684	12	NA	NA	7083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61368911	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61363400_61368900
ES.33009.8	chr8	-	5607	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436347	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ES.33009.9	chr8	-	5770	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-61	-1534	0	0	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436334	61363422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ES.3301.1	chr10	+	3551	1	Intergenic	novelGene_2564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	672	False	NA	NA	False	NA	NA	NA	79995952	79999503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_79996000_79999500
ES.3301.11	chr10	+	3293	9	Fusion	ENSMUSG00000045193.14_ENSMUSG00000035595.7	novel	834	8	NA	NA	-1	-26	intron_retention	FALSE	canonical	3	33	junction_7	151.526400340007	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGACCTCCCCCTTGAT	6190	False	NA	17	True	AATAAA	-23	NA	80003672	80010954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80008347_80008470_80009009_80010042_80010160_80010650
ES.3301.12	chr10	+	2752	5	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	60	junction_4	136.361651500706	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80008347_80008470
ES.3301.13	chr10	+	761	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	159.6200349441	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80008247_80008347_80008470
ES.3301.14	chr10	+	2264	8	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	105.786654765762	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815_80008347_80008470
ES.3301.15	chr10	+	3809	1	NIC	ENSMUSG00000045193.14	novel	1321	7	NA	NA	0	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATCTCGCTCTGACC	6191	False	NA	NA	False	ATTAAA	-11	NA	80003673	80007482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003700_80007500
ES.3301.16	chr10	+	2057	8	NNC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	170.46395273979	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006264_80006341_80006527_80007830_80008247_80008347_80008470
ES.3301.17	chr10	+	2875	3	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	6	intron_retention	FALSE	canonical	3	335	junction_2	30	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGGCTTGGGTCTGA	6191	False	NA	NA	False	AATAAA	-23	NA	80003673	80008626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80006341_80006527
ES.3301.18	chr10	+	2481	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	60	junction_6	113.828330783197	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80008347_80008470
ES.3301.19	chr10	+	2743	4	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	60	junction_3	145.849999047728	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80006341_80006527_80008347_80008470
ES.3301.2	chr10	+	1270	7	NNC	ENSMUSG00000045193.14	novel	894	2	NA	NA	-4630	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.343212681094	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGCTCTGACCATTTC	642	False	NA	NA	False	ATTAAA	-16	NA	79997188	80007487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_79997279_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ES.3301.20	chr10	+	1568	5	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-7	intron_retention	FALSE	canonical	3	335	junction_4	21.9260119492807	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATCTCGCTCTGACC	6191	False	NA	NA	False	ATTAAA	-11	NA	80003673	80007482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005957_80006035_80006175_80006258_80006341_80006527
ES.3301.21	chr10	+	916	7	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	40	junction_5	149.05191116595	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6191	False	NA	NA	False	AATAAA	-15	NA	80003673	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006341_80006527_80006599_80008247_80008347_80008470
ES.3301.22	chr10	+	1651	4	NIC	ENSMUSG00000045193.14	novel	912	6	NA	NA	1	-7	intron_retention	FALSE	canonical	3	335	junction_3	24.5130350811336	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATCTCGCTCTGACC	6192	False	NA	NA	False	ATTAAA	-11	NA	80003674	80007482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005957_80006035_80006341_80006527
ES.3301.23	chr10	+	1417	2	ISM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	268	27	268	-27	3prime_fragment	FALSE	canonical	3	59	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGACCTCCCCCTTGA	NA	False	NA	16	True	AATAAA	-22	NA	80009045	80010953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80010160_80010650
ES.3301.3	chr10	+	2217	7	NNC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	8	junction_5	157.151112698009	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCCGACTCTGTGGCTT	6121	False	NA	NA	False	AATAAA	-15	NA	80003603	80008618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006341_80006527_80007830_80008247_80008347_80008470
ES.3301.4	chr10	+	1317	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2	2	2	-2	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGCTCTGACCATTTC	6131	False	NA	NA	False	ATTAAA	-16	NA	80003613	80007487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ES.3301.5	chr10	+	843	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	-1	-8	-1	8	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGCTTGGGTCTGAGA	6190	False	NA	NA	False	AATAAA	-25	NA	80003672	80008628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
ES.3301.6	chr10	+	1436	5	NIC	ENSMUSG00000045193.14	novel	1321	7	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	285	junction_4	39.4588393138977	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGCTCTGACCATTTC	6190	False	NA	NA	False	ATTAAA	-16	NA	80003672	80007487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80006175_80006258_80006341_80006527_80006599_80006815
ES.3301.7	chr10	+	1554	5	NIC	ENSMUSG00000045193.14	novel	912	6	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	335	junction_4	21.4869146226256	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATCTCGCTCTGACC	6190	False	NA	NA	False	ATTAAA	-11	NA	80003672	80007482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006341_80006527
ES.3301.8	chr10	+	1475	6	FSM	ENSMUSG00000045193.14	ENSMUST00000140774.2	912	6	-47	-516	-1	-2	multi-exon	FALSE	canonical	3	335	junction_5	19.6936538001459	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCGCTCTGACCATTTC	6190	False	NA	NA	False	ATTAAA	-16	NA	80003672	80007487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ES.3301.9	chr10	+	2573	6	NIC	ENSMUSG00000045193.14	novel	834	8	NA	NA	-1	5	intron_retention	FALSE	canonical	3	60	junction_5	123.010568651641	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTGGCTTGGGTCTG	6190	False	NA	NA	False	AATAAA	-22	NA	80003672	80008625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006341_80006527_80008347_80008470
ES.33010.1	chr8	+	3575	1	FSM	ENSMUSG00000045746.4	ENSMUST00000052189.4	2472	1	-11	-1092	-11	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATGAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	61436459	61440034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61436500_61440000
ES.33010.2	chr8	+	2472	1	FSM	ENSMUSG00000045746.4	ENSMUST00000052189.4	2472	1	23	-23	23	23	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAGAACTCAAAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	61436493	61438965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61436500_61439000
ES.33011.1	chr8	+	5497	34	FSM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	-12	-7	-12	0	multi-exon	TRUE	canonical	3	7	junction_17	17.7121147315746	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446216	61584380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.10	chr8	+	5350	35	NNC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.0603802739626	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446238	61584380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446503_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.11	chr8	+	5248	34	NNC	ENSMUSG00000031644.20	novel	5478	34	NA	NA	9	-12	intron_retention	FALSE	canonical	0	0	junction_33	16.9364934905045	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTATGTACCTGAAG	NA	False	NA	-10	True	AGTAAA	-37	NA	61446242	61584361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177_61584148_61584267
ES.33011.14	chr8	+	5333	33	NNC	ENSMUSG00000031644.20	novel	5401	33	NA	NA	11	3	intron_retention	FALSE	canonical	0	0	junction_7	22.3281414013236	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATATCAGTTGTCCT	NA	False	NA	5	True	NA	NA	NA	61446244	61584376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446798_61459662_61459811_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61477900_61477950_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.15	chr8	+	5427	33	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	13	3	intron_retention	FALSE	canonical	0	0	junction_4	18.5976886584731	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATATCAGTTGTCCT	NA	False	NA	5	True	NA	NA	NA	61446246	61584376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.16	chr8	+	4557	34	NNC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	18	-504	intron_retention	FALSE	non_canonical	0	0	junction_2	17.9384213495567	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAACTGAA	NA	False	NA	NA	False	TTTAAA	-11	NA	61446251	61583430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446798_61459662_61459811_61460195_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.18	chr8	+	5352	33	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	2	-29	intron_retention	FALSE	canonical	1	1	junction_2	17.9356488591854	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTACTATTAAATTT	NA	False	NA	-27	True	AGTAAA	-20	NA	61446276	61584344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446798_61459662_61459811_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.2	chr8	+	5545	34	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	-9	3	intron_retention	FALSE	canonical	3	24	junction_17	14.9073046478596	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTTGTCCTTATTGAC	NA	False	NA	12	True	NA	NA	NA	61446219	61584383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.20	chr8	+	5351	33	NNC	ENSMUSG00000031644.20	novel	5401	33	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_25	17.1989450530403	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446276	61584380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553072_61557141_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.21	chr8	+	4134	26	NNC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	-21000	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	19.901115546622	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCAGTTGTCCTTA	2450	False	NA	7	True	NA	NA	NA	61481868	61584378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526620_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.22	chr8	+	3782	22	ISM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	50035	2	-6605	-2	3prime_fragment	FALSE	canonical	3	31	junction_5	13.3198911832562	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCAGTTGTCCTTA	8530	False	NA	7	True	NA	NA	NA	61496263	61584378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.23	chr8	+	3656	1	FSM	ENSMUSG00000109708.3	ENSMUST00000211661.3	3894	1	257	-19	257	19	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAGGAAGGTTATATGC	NA	False	NA	NA	False	AATATA	-39	NA	61503339	61506995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61503300_61507000
ES.33011.24	chr8	+	4621	17	ISM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	60078	0	3438	0	3prime_fragment	FALSE	canonical	3	48	junction_1	11.25	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61506306	61584380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.25	chr8	+	181	1	Intergenic	novelGene_26946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAACCGAA	NA	False	NA	NA	False	NA	NA	NA	61530684	61530865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61530700_61530900
ES.33011.27	chr8	+	3011	5	ISM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	126527	-3	69887	3	3prime_fragment	FALSE	canonical	3	73	junction_4	8.347903928532	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATATCAGTTGTCCT	NA	False	NA	5	True	NA	NA	NA	61572755	61584376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.3	chr8	+	5409	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	-7	-1	-7	1	multi-exon	FALSE	canonical	3	31	junction_16	13.1719028024618	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCAGTTGTCCTTATTG	NA	False	NA	10	True	NA	NA	NA	61446221	61584381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.4	chr8	+	5199	35	NNC	ENSMUSG00000031644.20	novel	5478	34	NA	NA	-4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	22.2695814072776	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGTATATCAGTTGT	NA	False	NA	2	True	NA	NA	NA	61446224	61584373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542602_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.5	chr8	+	5617	35	FSM	ENSMUSG00000031644.20	ENSMUST00000211672.2	5109	35	-74	-434	-4	3	multi-exon	FALSE	canonical	3	7	junction_18	18.7248331678183	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATATCAGTTGTCCT	NA	False	NA	5	True	NA	NA	NA	61446224	61584376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.6	chr8	+	4060	32	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	0	-6301	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	16.7320189414308	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGCTTCTTGGCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	61446228	61577633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145
ES.33011.7	chr8	+	5112	34	NIC	ENSMUSG00000031644.20	novel	5401	33	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	16.5039439313534	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATATCAGTTGTCCTT	NA	False	NA	6	True	NA	NA	NA	61446229	61584377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.8	chr8	+	5248	35	NNC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	20.3329764372029	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATATCAGTTGTCCTT	NA	False	NA	6	True	NA	NA	NA	61446229	61584377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61446391_61446675_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525398_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33011.9	chr8	+	5187	31	NIC	ENSMUSG00000031644.20	novel	5401	33	NA	NA	-2	2	intron_retention	FALSE	canonical	0	0	junction_9	17.5517014053402	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTTGTCCTTATTGA	NA	False	NA	11	True	NA	NA	NA	61446231	61584382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ES.33012.1	chr8	+	5515	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	-33	-3	-33	3	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTTTTTTTTTTAATC	NA	False	NA	10	True	ATTAAA	-21	NA	61676872	61849108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.10	chr8	+	5419	14	NNC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.1040438525645	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCCCTTTTTTTTTT	NA	False	NA	6	True	ATTAAA	-17	NA	61677230	61849104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61677381_61678865_61679353_61760305_61760459_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837409_61837523_61837610_61837964_61846702
ES.33012.12	chr8	+	5044	11	NIC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-45	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	17.7203273107468	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCTTTTTTTTTTAATC	NA	False	NA	10	True	ATTAAA	-21	NA	61677232	61849108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.13	chr8	+	3190	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	356	1933	-16	-1933	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTTAACTAATTTATTT	NA	False	NA	NA	False	ACTAAA	-17	NA	61677261	61847172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.14	chr8	+	3378	4	ISM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	148634	-1	10917	1	3prime_fragment	FALSE	canonical	3	41	junction_1	3.77123616632825	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCTTTTTTTTTTAA	NA	False	NA	8	True	ATTAAA	-19	NA	61825539	61849106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.15	chr8	+	6835	1	NIC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	27647	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCCCTTTTTTTTTT	NA	False	NA	6	True	ATTAAA	-17	NA	61842269	61849104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61842300_61849100
ES.33012.2	chr8	+	4887	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	298	294	-74	-294	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGATTTCTTTTTTTAC	NA	False	NA	NA	False	AAAAAG	-21	NA	61677203	61848811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.3	chr8	+	4803	10	NIC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-74	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.1233722304694	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCTAGGCCCTTTTT	NA	False	NA	1	True	ATTAAA	-12	NA	61677203	61849099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_61677381_61678865_61679353_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.4	chr8	+	5097	12	NNC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.9134891640513	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCCTTTTTTTTTTA	NA	False	NA	7	True	ATTAAA	-18	NA	61677205	61849105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806898_61814718_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.6	chr8	+	5320	13	NNC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.637580338359	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCCTTTTTTTTTTA	NA	False	NA	7	True	ATTAAA	-18	NA	61677217	61849105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61677381_61678865_61679353_61760305_61760459_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.7	chr8	+	5161	12	NNC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-59	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.7899025144961	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCCCTTTTTTTTTTAA	NA	False	NA	8	True	ATTAAA	-19	NA	61677218	61849106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827048_61827402_61837610_61837964_61846702
ES.33012.8	chr8	+	4657	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	319	503	-53	-503	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTGAATTTTTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	61677224	61848602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33012.9	chr8	+	5196	12	NNC	ENSMUSG00000031642.10	novel	5479	12	NA	NA	-49	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	16.4085242914007	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCTAGGCCCTTTTT	NA	False	NA	1	True	ATTAAA	-12	NA	61677228	61849099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802783_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ES.33013.1	chr8	-	301	1	FSM	ENSMUSG00000109610.2	ENSMUST00000210343.2	879	1	619	-41	619	41	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	61833802	61833501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61833500_61833800
ES.33014.1	chr8	+	186	1	Intergenic	novelGene_26947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61879988	61880174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61880000_61880200
ES.33015.1	chr8	-	4261	1	Intergenic	novelGene_26948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATAACC	9792	False	NA	NA	False	NA	NA	NA	61918213	61913952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_61914000_61918200
ES.33016.1	chr8	-	4403	1	Intergenic	novelGene_26949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATCAATCTCTAGATG	NA	False	NA	NA	False	NA	NA	NA	61933522	61929119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_61929100_61933500
ES.33017.1	chr8	+	1128	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	-13	3194	-13	111	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACAGAAGATTGAGGTA	2553	False	NA	32	True	ATTAAA	-32	NA	61940754	61956534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ES.33017.2	chr8	+	4320	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	-11	0	-11	0	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCCTCCTCCTCTCT	2555	False	NA	NA	False	ATTAAA	-29	NA	61940756	61959728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ES.33017.3	chr8	+	3730	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	1	578	0	-578	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTCATGCTGTTTT	2567	False	NA	NA	False	NA	NA	NA	61940768	61959150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ES.33017.4	chr8	+	4307	5	NNC	ENSMUSG00000031641.15	novel	4309	5	NA	NA	7	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.7851611098058	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTGTGTATTAAATAC	2574	False	NA	NA	False	AATAAA	-23	NA	61940775	61959697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_61941062_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ES.33017.5	chr8	+	3248	3	FSM	ENSMUSG00000031641.15	ENSMUST00000155442.2	701	3	-2394	-153	1247	93	multi-exon	FALSE	canonical	3	156	junction_2	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGCTAAGAGTAT	3848	False	NA	14	True	ATTAAA	-14	NA	61942049	61956516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61944713_61948101_61948237_61956066
ES.33017.6	chr8	+	1890	2	FSM	ENSMUSG00000031641.15	ENSMUST00000150932.2	731	2	-1066	-93	-1066	93	multi-exon	FALSE	canonical	3	156	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGCTAAGAGTAT	4014	False	NA	14	True	ATTAAA	-14	NA	61946796	61956516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_61948237_61956066
ES.33018.1	chr8	+	2934	1	Intergenic	novelGene_26950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTTTATTCTGTAAG	3444	False	NA	NA	False	AATAAA	-21	NA	61970946	61973880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_61970900_61973900
ES.33019.1	chr8	+	583	3	Antisense	novelGene_ENSMUSG00000058056.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAATCTGTTGTTTCTA	585	False	NA	NA	False	AATGAA	-8	NA	62002689	62014135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_62002793_62007452_62007556_62013758
ES.3302.1	chr10	-	3551	2	Antisense	novelGene_ENSMUSG00000035595.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTGGTATATGCCTTT	9909	False	NA	NA	False	NA	NA	NA	80008942	80005161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_80006253_80006482
ES.33020.1	chr8	+	5120	1	Intergenic	novelGene_26951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGACATGGTCAGAAG	NA	False	NA	NA	False	NA	NA	NA	62088539	62093659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_62088500_62093700
ES.33021.1	chr8	-	4340	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-140	-7	-140	7	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGTGATGTTGTGA	NA	False	NA	-1	True	AATAAA	-24	NA	62044316	61964459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.11	chr8	-	4043	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-36	186	-36	-186	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGAATGTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	62044212	61964652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.12	chr8	-	3021	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-107	1279	-107	-1279	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGACATTTATTACAG	NA	False	NA	NA	False	AATAAA	-34	NA	62044283	61965745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.13	chr8	-	2456	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	-57	1794	-57	1698	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAATCATATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	62044233	61966260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.15	chr8	-	3496	18	NNC	ENSMUSG00000058056.17	novel	5445	20	NA	NA	44252	244	intron_retention	FALSE	canonical	0	0	junction_10	48.6873366226254	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGTGTGTTTGTA	NA	False	NA	NA	False	ATTAAA	-36	NA	62168871	61967714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62137768_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62168792
ES.33021.16	chr8	-	5949	3	NIC	ENSMUSG00000058056.17	novel	4193	12	NA	NA	-56	-8568	intron_retention	FALSE	canonical	3	65	junction_1	1	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACCCCTCCCCCCACCT	NA	False	NA	NA	False	NA	NA	NA	62044232	61986722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61991858_62002604_62003280_62044093
ES.33021.17	chr8	-	2986	4	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	4	22256	1	-8568	5prime_fragment	FALSE	canonical	3	65	junction_2	3.39934634239519	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACCCCTCCCCCCACCT	NA	False	NA	NA	False	NA	NA	NA	62044172	61986722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.18	chr8	-	1313	2	ISM	ENSMUSG00000058056.17	ENSMUST00000135439.2	1325	10	0	33100	0	-23892	5prime_fragment	FALSE	canonical	3	67	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATGACTACCTTAGTTA	NA	False	NA	NA	False	AATACA	-21	NA	62044173	62002046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_62003280_62044093
ES.33021.19	chr8	-	4863	9	FSM	ENSMUSG00000058056.17	ENSMUST00000149042.8	2570	9	14	-2307	5	2307	multi-exon	FALSE	canonical	1	1	junction_2	1.65359456941537	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAACAAGAGGAAAACA	NA	False	NA	NA	False	CATAAA	-13	NA	62213118	62134235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62212844
ES.33021.20	chr8	-	2965	9	ISM	ENSMUSG00000058056.17	ENSMUST00000034057.14	3566	20	25126	168457	25105	31	internal_fragment	FALSE	canonical	0	0	junction_8	1.96452920568771	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	GATAAA	-38	NA	62330598	62136511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ES.33021.4	chr8	-	4296	13	NIC	ENSMUSG00000058056.17	novel	6349	22	NA	NA	-53	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	40.6327556699436	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGGCCCTCTGTGA	NA	False	NA	-9	True	AATAAA	-16	NA	62044229	61964467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61987891_61987943_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ES.33021.5	chr8	-	4324	12	NNC	ENSMUSG00000058056.17	novel	4193	12	NA	NA	-18722	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.6505073973141	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACAGTTGGCCCTCTGTG	NA	False	NA	-10	True	AATAAA	-15	NA	62005597	61964468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62005381
ES.33021.6	chr8	-	4557	12	NNC	ENSMUSG00000058056.17	novel	4193	12	NA	NA	-77	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.6505073973141	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACAGTTGGCCCTCTGTG	NA	False	NA	-10	True	AATAAA	-15	NA	62044253	61964468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62043804
ES.33021.7	chr8	-	3217	9	NNC	ENSMUSG00000058056.17	novel	4193	12	NA	NA	-1781	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.8910856930756	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACAGTTGGCCCTCTGT	NA	False	NA	-11	True	AATAAA	-14	NA	61988656	61964469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988636
ES.33021.8	chr8	-	5825	20	NIC	ENSMUSG00000058056.17	novel	6349	22	NA	NA	25095	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	50.5011450461228	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACAGTTGGCCCTCTGT	NA	False	NA	-11	True	AATAAA	-14	NA	62330608	61964469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62137768_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ES.33021.9	chr8	-	3282	9	NNC	ENSMUSG00000058056.17	novel	4193	12	NA	NA	-1796	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	37.2422391244136	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATGACAGTTGGCCCT	NA	False	NA	-15	True	AATAAA	-10	NA	61988671	61964473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988582
ES.33022.1	chr8	+	178	1	Intergenic	novelGene_26952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAATATA	NA	False	NA	NA	False	NA	NA	NA	62803478	62803656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_62803500_62803700
ES.33023.1	chr8	+	214	1	Intergenic	novelGene_26953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATTTTATTCTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	63097597	63097811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_63097600_63097800
ES.33024.1	chr8	-	198	1	Intergenic	novelGene_26954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTTTTGTTAAGTC	NA	False	NA	NA	False	AATATA	-9	NA	63540967	63540769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_63540800_63541000
ES.33025.1	chr8	+	1250	1	Intergenic	novelGene_26955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCCTCAGTGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	64176960	64178210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_64177000_64178200
ES.33026.1	chr8	-	8755	9	NNC	ENSMUSG00000094443.3	novel	3739	8	NA	NA	30	42823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.31695671910659	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATCGTTAAACATTATT	NA	False	NA	NA	False	ATTAAA	-3	NA	64405174	64334904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64339973_64377749_64377901_64379499_64382125_64384288_64384531_64391401_64391488_64393057_64393136_64394037_64394214_64396130_64396257_64404971
ES.33026.2	chr8	-	3842	9	NNC	ENSMUSG00000094443.3	novel	3739	8	NA	NA	14	17275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.31695671910659	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGTCATCACATAACTT	NA	False	NA	NA	False	CATAAA	-35	NA	64405190	64360452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64360592_64377749_64377901_64379499_64382125_64384288_64384531_64391401_64391488_64393057_64393136_64394037_64394214_64396130_64396257_64404971
ES.33026.3	chr8	-	3435	6	NNC	ENSMUSG00000094443.3	novel	3739	8	NA	NA	18876	17269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.49666295470958	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTGGTCATCACA	NA	False	NA	NA	False	CATAAA	-29	NA	64386328	64360458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64360592_64376186_64376266_64377749_64377901_64379499_64382125_64384288_64384531_64386123
ES.33027.1	chr8	-	5640	21	FSM	ENSMUSG00000053626.6	ENSMUST00000066166.6	4767	21	-92	-781	-77	781	multi-exon	TRUE	canonical	0	0	junction_18	1.14017542509914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTTTTCTCATTCTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	64659119	64467183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_64469215_64470514_64470766_64478095_64478310_64491489_64491618_64494439_64494566_64500037_64500219_64504387_64504549_64506893_64507020_64509288_64509485_64523186_64523333_64524306_64524424_64527258_64527362_64538484_64538601_64546902_64547028_64551462_64551569_64554870_64555050_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64658248
ES.33027.2	chr8	-	5313	22	NNC	ENSMUSG00000053626.6	novel	4767	21	NA	NA	338	778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	1.25808045844028	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTACTTTTCTCATTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64658689	64467186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64469215_64470514_64470766_64478095_64478310_64491489_64491618_64494439_64494566_64500037_64500219_64504387_64504549_64506893_64507020_64509288_64509485_64523186_64523333_64524306_64524424_64527258_64527362_64538484_64538601_64546902_64547028_64551462_64551569_64554870_64555050_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64629895_64630002_64658248
ES.33027.3	chr8	-	5131	22	NNC	ENSMUSG00000053626.6	novel	4767	21	NA	NA	358	776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.19142819078065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTTACTTTTCTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	64658669	64467188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64467418_64467471_64469215_64470514_64470766_64478095_64478310_64491489_64491618_64494439_64494566_64500037_64500219_64504387_64504549_64506893_64507020_64509288_64509485_64523186_64523333_64524306_64524424_64527258_64527362_64538484_64538601_64546902_64547028_64551462_64551569_64554870_64555050_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64658248
ES.33027.4	chr8	-	1624	6	NNC	ENSMUSG00000053626.6	novel	2516	2	NA	NA	183	-24699	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.16619037896906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	64658844	64562058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_64562624_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64658248
ES.33028.1	chr8	+	187	1	Intergenic	novelGene_26956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTTAGAGGAATTGC	NA	False	NA	NA	False	NA	NA	NA	64809905	64810092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_64809900_64810100
ES.33029.1	chr8	+	96	1	Intergenic	novelGene_26957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTTCTCAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	64898650	64898746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_64898600_64898700
ES.3303.1	chr10	-	175	1	Intergenic	novelGene_2565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGTCGGCAGCCTGAA	9579	False	NA	NA	False	NA	NA	NA	80009272	80009097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80009100_80009300
ES.33030.1	chr8	-	2121	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	-4	0	-4	0	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	65146092	65045575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ES.33030.3	chr8	-	2091	9	NNC	ENSMUSG00000037852.9	novel	2117	9	NA	NA	-1	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.6650786679038	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	65146089	65045593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070731_65072384_65072582_65145676
ES.33031.1	chr8	+	177	1	Antisense	novelGene_ENSMUSG00000031604.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	65179818	65179995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_65179800_65180000
ES.33032.1	chr8	-	1890	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	172	-18	-39	18	multi-exon	TRUE	canonical	3	690	junction_2	21.3822356174466	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGAGCTTTGCTGGT	NA	False	NA	1	True	AATAAA	-19	NA	65186654	65171154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ES.33032.10	chr8	-	1954	7	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	333.921148376879	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186604	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65182531_65182670_65186541
ES.33032.11	chr8	-	1851	6	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	283.834740650259	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186610	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180972_65186541
ES.33032.12	chr8	-	2201	8	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	350.999563927864	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186580	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65182531_65182670_65183805_65184077_65186541
ES.33032.13	chr8	-	2167	7	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	333.921148376879	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186582	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65183805_65184179_65186541
ES.33032.14	chr8	-	1561	4	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	338.098933581413	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186625	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65173531_65180657_65180943_65186541
ES.33032.15	chr8	-	1784	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	175	85	-36	3	multi-exon	FALSE	canonical	3	690	junction_2	21.3822356174466	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGTTTTCATGAAGAT	NA	False	NA	-38	True	AATAAA	-19	NA	65186651	65171257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ES.33032.16	chr8	-	2893	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	10	1	intron_retention	FALSE	canonical	3	690	junction_1	23.8995292840675	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGGTTTTCATGAAG	NA	False	NA	-40	True	AATAAA	-17	NA	65186602	65171259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ES.33032.17	chr8	-	2220	7	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	334.391819410836	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCTGGTTTTCATGAA	NA	False	NA	-41	True	AATAAA	-16	NA	65186604	65171260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65183590_65184077_65186541
ES.33032.19	chr8	-	795	3	ISM	ENSMUSG00000031604.11	ENSMUST00000132013.2	2766	5	15	5056	15	382	5prime_fragment	FALSE	canonical	3	705	junction_1	24.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	65186597	65176316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_65176771_65180657_65180943_65186541
ES.33032.2	chr8	-	2848	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	690	junction_2	23.6696007570892	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186633	65171172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65173531_65175497_65176771_65180657_65180943_65186541
ES.33032.20	chr8	-	3710	1	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	-15	-2237	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAAAGAGAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	65186630	65182920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65182900_65186600
ES.33032.3	chr8	-	1721	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	300.648777645944	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAATGGTTCTGTTTTTT	NA	False	NA	-19	True	ATTAAA	-16	NA	65186654	65171174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65173531_65175497_65175625_65180657_65180943_65186541
ES.33032.4	chr8	-	3429	5	ISM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	4209	5	1476	-5	3prime_fragment	FALSE	canonical	3	690	junction_2	12.9034879005639	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGAATGGTTCTGTTT	NA	False	NA	-22	True	ATTAAA	-13	NA	65182617	65171177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657
ES.33032.5	chr8	-	2952	4	ISM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	8572	6	-3289	-6	3prime_fragment	FALSE	canonical	3	690	junction_2	14.6590889515307	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65178254	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621
ES.33032.6	chr8	-	1710	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	314.597361718117	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186625	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65173531_65176621_65176771_65180657_65180943_65186541
ES.33032.7	chr8	-	4787	4	NIC	ENSMUSG00000031604.11	novel	2766	5	NA	NA	1	-6	intron_retention	FALSE	canonical	3	705	junction_2	20.8539897594894	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186611	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65176771_65180657_65180943_65186541
ES.33032.8	chr8	-	1720	6	NNC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.218256685155	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186614	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176665_65180657_65180943_65186541
ES.33032.9	chr8	-	6706	4	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	2	-6	intron_retention	FALSE	canonical	3	690	junction_2	26.2339898266013	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGAATGGTTCTGTT	NA	False	NA	-23	True	ATTAAA	-12	NA	65186610	65171178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65172216_65173375_65173531_65175497_65180943_65186541
ES.33033.1	chr8	+	170	1	Intergenic	novelGene_26958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAATATTTTTTTCCTTG	NA	False	NA	NA	False	NA	NA	NA	65222011	65222181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_65222000_65222200
ES.33034.1	chr8	-	3392	16	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	28	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	67.7552457993721	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGGAGTTGTTCTTGGG	NA	False	NA	NA	False	ATTAAA	-15	NA	65302548	65192706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65251394_65251494_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.11	chr8	-	3141	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.2514036526625	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTGGTTTTACCAGTG	NA	False	NA	-4	True	AATAAA	-26	NA	65302596	65192883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217252_65232739_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.12	chr8	-	1455	4	NNC	ENSMUSG00000031605.9	novel	5126	14	NA	NA	-145	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	81.3483592677539	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302814	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65193578_65275642_65275750_65287094_65287221_65302284
ES.33034.13	chr8	-	3439	17	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	75.9350051030485	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302685	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65251394_65251494_65252438_65252528_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.14	chr8	-	3044	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-28	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	60.0582557425724	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302604	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65302284
ES.33034.15	chr8	-	5099	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	41	-4	intron_retention	FALSE	canonical	1	64	junction_9	38.7583928685321	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302628	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.16	chr8	-	2942	13	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-29	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	60.876240575997	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302605	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65287094_65287221_65302284
ES.33034.18	chr8	-	3898	9	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-1733	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	85.6427901226951	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65209738	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65208483_65208697_65209332_65209475
ES.33034.19	chr8	-	3141	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-35	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.8519380245112	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302611	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202171_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.2	chr8	-	3471	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	-60	1	-60	-1	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTGGGAGTTGTTCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	65302729	65192709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.20	chr8	-	3205	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	71.8671180239004	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCTTGGTTTTACCAG	NA	False	NA	-6	True	AATAAA	-24	NA	65302610	65192885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211300_65212762_65212881_65217152_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.21	chr8	-	3008	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-30	-5	combination_of_known_splicesites	FALSE	canonical	1	29	junction_10	47.3984744967112	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCCTTGGTTTTACCA	NA	False	NA	-7	True	AATAAA	-23	NA	65302606	65192886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.23	chr8	-	3292	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.3793016157513	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTCCTTGGTTTTACC	NA	False	NA	-8	True	AATAAA	-22	NA	65302682	65192887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202019_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.24	chr8	-	3189	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	35	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	58.8408437903399	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAACGTCCTTGGTTTT	NA	False	NA	-11	True	AATAAA	-19	NA	65302634	65192890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212772_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.25	chr8	-	3226	16	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-35	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	69.7772328358056	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCACAACGTCCTTG	NA	False	NA	-16	True	AATAAA	-14	NA	65302611	65192895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65203465_65203525_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.28	chr8	-	5168	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-35	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	58.6240182024747	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTTTCACAACGTCC	NA	False	NA	-19	True	AATAAA	-11	NA	65302611	65192898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65209441_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.29	chr8	-	2840	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	59	513	-34	-340	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTATTTTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	65302610	65193221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.3	chr8	-	3223	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	58.0195252145556	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACACTGGGAGTTGTTC	NA	False	NA	NA	False	ATTAAA	-10	NA	65302640	65192711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302441
ES.33034.30	chr8	-	3324	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	0	-582	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	58.6708215906548	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTCTATATGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	65302669	65193463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65203525_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.31	chr8	-	2670	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	-13	755	-13	-582	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTGTCTATATGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	65302682	65193463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.32	chr8	-	4530	16	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-34	-743	intron_retention	FALSE	canonical	0	0	junction_11	78.4197820847662	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTTATCTTTATTCT	NA	False	NA	3	True	AATAAA	-23	NA	65302610	65193624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65251394_65251494_65252438_65252528_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.33	chr8	-	4343	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-35	-743	intron_retention	FALSE	canonical	1	64	junction_9	38.7583928685321	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTTATCTTTATTCT	NA	False	NA	3	True	AATAAA	-23	NA	65302611	65193624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.34	chr8	-	2701	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	-208	919	-208	-746	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGTTTTATCTTTAT	NA	False	NA	0	True	AATAAA	-20	NA	65302877	65193627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.37	chr8	-	2908	13	ISM	ENSMUSG00000031605.9	ENSMUST00000210166.2	5126	14	-23	8174	-23	3136	5prime_fragment	FALSE	canonical	1	64	junction_8	39.92101576864	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	65302599	65201055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.38	chr8	-	3329	13	NNC	ENSMUSG00000031605.9	novel	769	6	NA	NA	-14	3132	intron_retention	FALSE	non_canonical	0	0	junction_1	59.0075324758534	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTTTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	65302590	65201059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65201800_65201887_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.39	chr8	-	2933	1	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-6808	913	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65214813	65211880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65211900_65214800
ES.33034.40	chr8	-	2371	1	Intergenic	novelGene_26959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGGATACCATATTGT	NA	False	NA	NA	False	NA	NA	NA	65241412	65239041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65239000_65241400
ES.33034.41	chr8	-	811	3	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-29	-22232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGCCTATTCATTTG	NA	False	NA	NA	False	AAAACA	-27	NA	65302605	65286650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65286807_65286886_65287221_65302284
ES.33034.5	chr8	-	3362	15	NNC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	-34	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	58.6449451516218	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAACCAATAACAC	NA	False	NA	NA	False	ACTAAA	-7	NA	65302610	65192723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211300_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.8	chr8	-	3448	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	-207	171	-207	2	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTACCAGTGTGAC	NA	False	NA	0	True	AATAAA	-30	NA	65302876	65192879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33034.9	chr8	-	3585	14	NIC	ENSMUSG00000031605.9	novel	3412	15	NA	NA	85	2	intron_retention	FALSE	canonical	1	64	junction_9	37.5865077139414	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTTACCAGTGTGAC	NA	False	NA	0	True	AATAAA	-30	NA	65302491	65192879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_65194009_65195988_65196133_65202065_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ES.33035.1	chr8	+	1201	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	-16	-63	-16	63	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCCTGGAATAATGCG	NA	False	NA	88	True	NA	NA	NA	65399820	65421748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ES.33035.10	chr8	+	3556	5	NNC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	1174	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	287.040502368568	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAATGTTTTGTATGTTG	NA	False	NA	22	True	TATAAA	-14	NA	65413368	65421682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_65414657_65415095_65416105_65416148_65416985_65418190_65418294_65421362
ES.33035.2	chr8	+	1517	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	1	-396	1	396	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTTACAGTGTCCTC	NA	False	NA	NA	False	TATAAA	-20	NA	65399837	65422081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ES.33035.3	chr8	+	1297	7	NNC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	271.914457545424	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399852	65421684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_65399986_65409037_65409185_65411996_65412262_65414040_65414233_65416849_65416985_65418190_65418294_65421362
ES.33035.4	chr8	+	3779	4	NIC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	13	junction_2	272.235192434777	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	False	NA	25	True	TATAAA	-17	NA	65399856	65421685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_65399986_65409037_65412262_65418190_65418294_65421362
ES.33035.5	chr8	+	2470	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	34	-1382	0	1382	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTAGACTGTGCTTGTT	NA	False	NA	NA	False	NA	NA	NA	65399870	65423067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ES.33035.6	chr8	+	3890	5	NIC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	5	-3	intron_retention	FALSE	canonical	3	529	junction_3	33.0482601660057	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGAATGTTTTGTATGT	NA	False	NA	20	True	TATAAA	-12	NA	65399875	65421680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_65399986_65409037_65412262_65416849_65416985_65418190_65418294_65421362
ES.33035.7	chr8	+	3969	6	NNC	ENSMUSG00000025521.16	novel	1122	6	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_3	279.779627564267	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399877	65421684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_65399986_65409037_65412262_65415914_65415992_65416849_65416985_65418190_65418294_65421362
ES.33035.8	chr8	+	1816	5	ISM	ENSMUSG00000025521.16	ENSMUST00000209852.2	1193	6	28	0	-7	0	intron_retention	FALSE	canonical	3	529	junction_4	33.0482601660057	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTGCACACCTTTA	NA	False	NA	NA	False	NA	NA	NA	65399898	65419372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190
ES.33035.9	chr8	+	924	5	FSM	ENSMUSG00000025521.16	ENSMUST00000079896.9	916	5	-7	-1	-7	1	multi-exon	FALSE	canonical	3	13	junction_3	253.637536654179	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTTTTGTATGTTGTG	NA	False	NA	24	True	TATAAA	-16	NA	65399898	65421684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65418190_65418294_65421362
ES.33036.1	chr8	+	180	1	Intergenic	novelGene_26961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTGACAAATCT	NA	False	NA	NA	False	NA	NA	NA	65484216	65484396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_65484200_65484400
ES.33037.1	chr8	-	2290	3	FSM	ENSMUSG00000109805.2	ENSMUST00000148141.3	342	3	-81	-1867	-81	1867	multi-exon	FALSE	canonical	0	0	junction_1	214.5	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTTTGTTTCTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	65489829	65465640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65467553_65488316_65488407_65489541
ES.33037.2	chr8	-	177	1	Intergenic	novelGene_26960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	65477320	65477143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65477100_65477300
ES.33037.3	chr8	-	3217	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	12	-2284	12	2281	multi-exon	FALSE	canonical	3	429	junction_2	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATTGTCCTTATGGAT	NA	False	NA	NA	False	NA	NA	NA	65489812	65478787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65481644_65488316_65488407_65489541
ES.33037.4	chr8	-	1957	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	13	-1025	13	1022	multi-exon	FALSE	canonical	3	429	junction_2	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATATATTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-41	NA	65489811	65480046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65481644_65488316_65488407_65489541
ES.33037.5	chr8	-	1014	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	-66	-3	-66	0	multi-exon	FALSE	canonical	3	429	junction_2	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGAGTTTATTGTGTGT	NA	False	NA	-21	True	ATTAAA	-21	NA	65489890	65481068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_65481644_65488316_65488407_65489541
ES.33037.6	chr8	-	664	2	NNC	ENSMUSG00000079042.11	novel	945	3	NA	NA	3373	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTTATGAGTTTATT	NA	False	NA	-27	True	ATTAAA	-15	NA	65486451	65481074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_65481644_65486356
ES.33038.1	chr8	+	4811	11	Antisense	novelGene_ENSMUSG00002076124.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	0.670820393249937	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCAGGCAAGCGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	65498736	65575832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_65498801_65502783_65502947_65516517_65516586_65528983_65529156_65531875_65535226_65555729_65555841_65556918_65556948_65557319_65557569_65562227_65562347_65563215_65563456_65575586
ES.33038.2	chr8	+	712	3	Intergenic	novelGene_26962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTCGCCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	65499131	65532281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_65499275_65502783_65502947_65531875
ES.33038.3	chr8	+	176	1	Intergenic	novelGene_26964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65511973	65512149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_65512000_65512100
ES.33039.1	chr8	-	236	1	Intergenic	novelGene_26963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65509371	65509135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65509100_65509400
ES.3304.1	chr10	+	2240	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	-103	-6	-103	6	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCTGTTACAGGTGTG	NA	False	NA	22	True	AATAAA	-23	NA	80015212	80025850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ES.3304.2	chr10	+	1907	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	-55	279	-55	-279	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGACTGGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	80015260	80025565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ES.3304.3	chr10	+	1450	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	199	482	199	-482	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTTTTCCGA	NA	False	NA	NA	False	NA	NA	NA	80015514	80025362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ES.33040.1	chr8	-	213	1	Intergenic	novelGene_26965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAGGGCAAGG	NA	False	NA	NA	False	NA	NA	NA	65526157	65525944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65525900_65526200
ES.33041.1	chr8	-	160	1	Intergenic	novelGene_26966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	65605252	65605092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65605100_65605300
ES.33042.1	chr8	-	175	1	Intergenic	novelGene_26967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	65983708	65983533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_65983500_65983700
ES.33043.1	chr8	-	179	1	Intergenic	novelGene_26968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	66227218	66227039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_66227000_66227200
ES.33044.1	chr8	+	163	1	Intergenic	novelGene_26969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAAAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	66373265	66373428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_66373300_66373400
ES.33045.1	chr8	+	6792	1	Antisense	novelGene_ENSMUSG00000025591.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTAGTATCCAAACCCA	NA	False	NA	NA	False	AATACA	-42	NA	66927224	66934016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_66927200_66934000
ES.33046.1	chr8	+	2764	1	Antisense	novelGene_ENSMUSG00000025591.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATTCGGATACTGTGA	NA	False	NA	NA	False	NA	NA	NA	66935833	66938597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_66935800_66938600
ES.33047.1	chr8	-	4782	6	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	15898	intron_retention	TRUE	non_canonical	0	0	junction_1	341.073599095562	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTCTTTCTTTGTAGC	NA	False	NA	NA	False	AATAAA	-10	NA	66939171	66909871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66909879_66929118_66929562_66930666_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.10	chr8	-	4728	6	NIC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	4	91	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTGCTGCACTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	66939178	66926890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.12	chr8	-	3208	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-1	1121	1	91	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTTGCTGCACTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	66939172	66926890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ES.33047.14	chr8	-	1327	8	NNC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	-13	-2011	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	353.35332378311	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTTAGTCTGCTTTT	NA	False	NA	99	True	AATACA	-3	NA	66939195	66928992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66937302_66937445_66939063
ES.33047.15	chr8	-	4860	5	ISM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	2013	0	-2013	intron_retention	FALSE	canonical	3	740	junction_4	30.036436206714	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTAGTCTGCTT	NA	False	NA	97	True	AATACA	-1	NA	66939173	66928994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157
ES.33047.16	chr8	-	1129	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-27	3226	-16	-2014	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATTGTGTTAGTCTGCT	NA	False	NA	96	True	TTTAAA	-16	NA	66939198	66928995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ES.33047.17	chr8	-	4893	5	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2021	intron_retention	FALSE	canonical	3	740	junction_3	87.3727646352111	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAGAGATTGTGTTA	NA	False	NA	89	True	AATAGA	-41	NA	66939173	66929002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.18	chr8	-	1147	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-42	2045	-9	-2045	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCTCTTTAAATTGC	NA	False	NA	65	True	AATAGA	-17	NA	66939191	66929026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ES.33047.2	chr8	-	5848	6	NIC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939177	66925769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.20	chr8	-	1026	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-27	3329	-16	-2117	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGAATTTGCTATTGA	NA	False	NA	-7	True	AATAAA	-23	NA	66939198	66929098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ES.33047.21	chr8	-	2540	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	-16	-2117	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGAATTTGCTATTGA	NA	False	NA	-7	True	AATAAA	-23	NA	66939198	66929098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.22	chr8	-	3332	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	1	-2123	intron_retention	FALSE	canonical	3	118	junction_4	295.327343806834	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTATGTAAGAATTTGC	NA	False	NA	-13	True	AATAAA	-17	NA	66939172	66929104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ES.33047.23	chr8	-	4789	5	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	1	-2124	intron_retention	FALSE	canonical	3	740	junction_3	87.3727646352111	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTATGTAAGAATTTG	NA	False	NA	-14	True	AATAAA	-16	NA	66939172	66929105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66933141_66934114_66934200_66935157_66936823_66939063
ES.33047.24	chr8	-	4756	5	ISM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-32	2125	1	-2125	intron_retention	FALSE	canonical	3	740	junction_4	30.036436206714	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939181	66929106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157
ES.33047.25	chr8	-	1189	8	NNC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2127	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	353.35332378311	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCTGTATGTAAGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	66939173	66929108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66937302_66937445_66939063
ES.33047.26	chr8	-	1072	7	NNC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2127	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	312.317368855606	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCTGTATGTAAGAAT	NA	False	NA	-17	True	AATAAA	-13	NA	66939173	66929108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935277_66936709_66936823_66939063
ES.33047.27	chr8	-	5753	4	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2128	intron_retention	FALSE	canonical	3	792	junction_1	81.1089801850983	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATCTGTATGTAAGAA	NA	False	NA	-18	True	AATAAA	-12	NA	66939182	66929109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_66929562_66930666_66933141_66934114_66936823_66939063
ES.33047.28	chr8	-	4130	1	FSM	ENSMUSG00000025591.7	ENSMUST00000213036.2	1787	1	14	-2357	-10	17	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGTATAATACATATATA	NA	False	NA	NA	False	NA	NA	NA	66939159	66935029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66935000_66939200
ES.33047.3	chr8	-	4408	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-46	-1212	-13	0	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939195	66925769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ES.33047.4	chr8	-	4329	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-1	0	1	0	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939172	66925769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ES.33047.5	chr8	-	5201	7	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	311.233924172086	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939155	66925769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936085_66936709_66936823_66939063
ES.33047.6	chr8	-	3509	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-2	821	0	391	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTCAAGTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	66939173	66926590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ES.33047.7	chr8	-	3563	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-23	-390	1	390	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCTCAAGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	66939172	66926591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ES.33047.8	chr8	-	3312	7	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	313.039800451423	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTGCTGCACTGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	66939171	66926888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935299_66936709_66936823_66939063
ES.33047.9	chr8	-	3284	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-42	-92	-9	92	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTGCTGCACTGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	66939191	66926889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ES.33048.1	chr8	-	137	1	Intergenic	novelGene_26970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66940989	66940852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_66940900_66941000
ES.33049.1	chr8	+	6387	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-31	-871	-28	871	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGTGACTTTAATTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	66964379	66971858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_66966353_66967444
ES.33049.2	chr8	+	2296	1	FSM	ENSMUSG00000025519.6	ENSMUST00000002025.5	2021	1	4	-279	1	279	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATCAACTTTAGCAA	NA	False	NA	NA	False	TATAAA	-16	NA	66964411	66966707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_66964400_66966700
ES.33049.3	chr8	+	2727	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	1	2757	1	1802	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGTTTTTCATGAA	NA	False	NA	NA	False	CATAAA	-13	NA	66964411	66968230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_66966353_66967444
ES.3305.1	chr10	+	175	1	Intergenic	novelGene_2566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	80031302	80031477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80031300_80031500
ES.33050.1	chr8	+	1578	3	Intergenic	novelGene_26971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTCTTTTTTTTTAT	NA	False	NA	NA	False	TATAAA	-15	NA	67032782	67038465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_67032966_67036551_67036708_67037226
ES.33051.1	chr8	-	2253	2	Antisense	novelGene_ENSMUSG00000036437.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGCTGGCTAGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	67157658	67154857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_67156774_67157321
ES.33052.1	chr8	+	2959	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	25	6	25	-6	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTAGAGTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	67312893	67343210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ES.33052.2	chr8	+	2704	9	NNC	ENSMUSG00000014907.11	novel	2990	8	NA	NA	27	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	23.6801604724292	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTAGAGTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	67312895	67343210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_67313151_67313403_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ES.33052.3	chr8	+	1649	5	ISM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	45	6598	45	369	5prime_fragment	FALSE	canonical	3	70	junction_2	3.69966214673719	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTGGGGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	67312913	67336618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094
ES.33052.4	chr8	+	1994	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	45	951	45	-951	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAATGACTCAGTTGT	NA	False	NA	NA	False	TATAAA	-17	NA	67312913	67342265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ES.33052.5	chr8	+	6066	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	46	-3122	46	3122	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCCATGTTTATT	NA	False	NA	NA	False	AATAAA	-26	NA	67312914	67346338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ES.33052.7	chr8	+	2117	9	NNC	ENSMUSG00000014907.11	novel	2990	8	NA	NA	84	-952	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.9303653389351	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAAATGACTCAGTTG	NA	False	NA	NA	False	TATAAA	-16	NA	67312952	67342264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67335576_67335740_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ES.33052.8	chr8	+	1426	3	NIC	ENSMUSG00000014907.11	novel	595	5	NA	NA	88	366	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATTGTGGGGTTTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	67312956	67336615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_67313699_67317189_67317353_67336094
ES.33052.9	chr8	+	4668	1	NIC	ENSMUSG00000014907.11	novel	2990	8	NA	NA	18844	871	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTCTAAAAATGCTTAT	NA	False	NA	NA	False	NA	NA	NA	67332452	67337120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_67332500_67337100
ES.33053.1	chr8	-	916	1	Intergenic	novelGene_26972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGCATGAAAAAGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	67348702	67347786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_67347800_67348700
ES.33054.1	chr8	-	178	1	Intergenic	novelGene_26973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGTATGAATAA	NA	False	NA	NA	False	NA	NA	NA	67595609	67595431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_67595400_67595600
ES.33055.1	chr8	+	1764	2	FSM	ENSMUSG00000025588.5	ENSMUST00000212171.2	1208	2	-18	-538	-18	514	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTGGATCAAAGGCTT	NA	False	NA	NA	False	ATTAAA	-30	NA	67933554	67945270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_67933668_67943619
ES.33056.1	chr8	+	1090	1	ISM	ENSMUSG00000051147.11	ENSMUST00000093470.7	1396	2	6629	8	6539	6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCATTTTCAAAGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	67954138	67955228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_67954100_67955200
ES.33057.1	chr8	-	1688	1	FSM	ENSMUSG00000030735.7	ENSMUST00000032981.7	1356	1	-68	-264	-68	264	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCTGTAGCGTTTGTTG	6271	False	NA	NA	False	NA	NA	NA	67968310	67966622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_67966600_67968300
ES.33057.2	chr8	-	1493	2	Genic_Genomic	ENSMUSG00000030735.7	novel	1356	1	NA	NA	-44	260	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTAGCTGTAGCGTTT	6295	False	NA	NA	False	AATAAA	-42	NA	67968286	67966626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_67967838_67968004
ES.33058.1	chr8	+	1078	6	Antisense	novelGene_ENSMUSG00000030465.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATGTGGCTACGGAT	NA	False	NA	NA	False	AATAAA	-21	NA	68112862	68162715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_68113157_68142327_68142387_68142875_68142986_68143240_68143366_68146309_68146437_68162352
ES.33059.1	chr8	-	176	1	Intergenic	novelGene_26974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGGTGCTA	NA	False	NA	NA	False	NA	NA	NA	68260039	68259863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_68259900_68260000
ES.3306.1	chr10	+	177	1	Intergenic	novelGene_2567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACATTTGTGC	NA	False	NA	NA	False	NA	NA	NA	80039151	80039328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80039200_80039300
ES.33060.1	chr8	+	2822	1	Antisense	novelGene_ENSMUSG00000030465.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68402828	68405650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_68402800_68405600
ES.33061.1	chr8	+	213	1	Intergenic	novelGene_26975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCCAACCCAAGAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	68510813	68511026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_68510800_68511000
ES.33062.1	chr8	+	163	1	Intergenic	novelGene_26976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68651574	68651737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_68651600_68651700
ES.33063.1	chr8	+	2815	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	-92	-5	-92	0	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	22	True	NA	NA	NA	68729126	68800351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ES.33063.2	chr8	+	2931	10	NNC	ENSMUSG00000053886.5	novel	2718	9	NA	NA	-59	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.2372188901444	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTCT	NA	False	NA	27	True	NA	NA	NA	68729159	68800356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_68729525_68734684_68735064_68746954_68747112_68747507_68747652_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ES.33063.4	chr8	+	2434	9	NNC	ENSMUSG00000053886.5	novel	1600	8	NA	NA	361	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.5974135047432	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTGCCTTGGTCATG	NA	False	NA	19	True	NA	NA	NA	68729579	68800348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_68729600_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ES.33063.5	chr8	+	2397	8	NNC	ENSMUSG00000053886.5	novel	2718	9	NA	NA	-251	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4877117164825	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTGCCTTGGTCATG	NA	False	NA	19	True	NA	NA	NA	68734707	68800348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_68735070_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ES.33064.1	chr8	+	173	1	Intergenic	novelGene_26977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATTAAA	NA	False	NA	NA	False	NA	NA	NA	68959194	68959367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_68959200_68959400
ES.33065.1	chr8	-	2645	7	NNC	ENSMUSG00000036356.16	novel	3943	10	NA	NA	109782	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTAATAGGATTGTGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	68872757	68809439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247_68841350_68853954_68854172_68872713
ES.33065.2	chr8	-	3554	9	NIC	ENSMUSG00000036356.16	novel	3943	10	NA	NA	-33	-285	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.992156741649222	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGTTTCTACATCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	69187831	68809717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247_68841350_68853954_68854172_68913575_68914504_69009623_69009773_69187677
ES.33065.3	chr8	-	171	1	Intergenic	novelGene_26978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATTAAAG	6673	False	NA	NA	False	NA	NA	NA	69013173	69013002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69013000_69013200
ES.33066.1	chr8	-	837	1	Intergenic	novelGene_26979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATATGAATATAA	NA	False	NA	NA	False	AAGAAA	-39	NA	69246386	69245549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69245500_69246400
ES.33067.1	chr8	+	2971	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	2	889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	169.630210471184	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGTCACCCAAAGGTC	NA	False	NA	NA	False	TATAAA	-34	NA	69246588	69281042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.12	chr8	+	2383	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	-7	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	223.705686952746	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246600	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257575_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266885_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.13	chr8	+	2780	19	NNC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	-6	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	248.714001055404	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTTAAAAAAAAACTTA	NA	False	NA	14	True	AATAAA	-16	NA	69246601	69280297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277703_69277782_69279385_69279673_69279928
ES.33067.14	chr8	+	5518	17	ISM	ENSMUSG00000031864.17	ENSMUST00000110242.8	4250	18	-6	1747	-6	160	intron_retention	FALSE	canonical	3	21	junction_16	170.159748012713	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246601	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841
ES.33067.15	chr8	+	3210	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-3	-763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	169.630210471184	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAGTTTATATTTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	69246604	69281297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.16	chr8	+	2519	18	FSM	ENSMUSG00000031864.17	ENSMUST00000070713.8	4192	18	-59	1732	-1	175	multi-exon	FALSE	canonical	3	14	junction_17	216.037065895717	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGGTACATTTGTCTT	NA	False	NA	45	True	TTTAAA	-22	NA	69246606	69280328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277703_69277782_69279928
ES.33067.18	chr8	+	5727	8	NIC	ENSMUSG00000031864.17	novel	2322	16	NA	NA	2	-5995	intron_retention	FALSE	canonical	3	530	junction_6	59.0444315575921	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAATTAAGTGTAAGTTA	NA	False	NA	NA	False	ATTAAA	-6	NA	69246609	69261269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027
ES.33067.19	chr8	+	7489	16	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	2	177	intron_retention	FALSE	canonical	2	5	junction_12	176.123618202923	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGTACATTTGTCTTCT	NA	False	NA	47	True	TTTAAA	-24	NA	69246609	69280330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266885_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.2	chr8	+	2535	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	17	1649	-10	260	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATTTACCTAATGGAA	NA	False	NA	130	True	ATTAAA	-19	NA	69246597	69280413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.20	chr8	+	5531	17	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	3	160	intron_retention	FALSE	non_canonical	0	0	junction_16	174.66754134641	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246610	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276819
ES.33067.22	chr8	+	3282	19	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	3	-763	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	245.533238050685	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAGTTTATATTTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	69246610	69281297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276920_69279928_69280809_69281010
ES.33067.23	chr8	+	3968	18	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	169.630210471184	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGCCTAATGCCATGT	NA	False	NA	NA	False	AATAAA	-26	NA	69246611	69282062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.26	chr8	+	2483	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	4	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	218.752360343173	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246611	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271586_69271649_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.27	chr8	+	2560	18	NNC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	4	151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	218.759351752648	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246611	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277633_69277782_69279928
ES.33067.28	chr8	+	2520	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	5	160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	217.278893698994	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246612	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276819_69276920_69279928
ES.33067.29	chr8	+	3404	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	5	-766	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	163.936296697833	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATAGTAGTTTATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	69246612	69281294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.3	chr8	+	5108	16	FSM	ENSMUSG00000031864.17	ENSMUST00000110241.8	2322	16	12	-2798	-9	-2192	multi-exon	FALSE	canonical	3	438	junction_4	82.2904341679855	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGAGTTGCCAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	69246598	69277961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.31	chr8	+	4166	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	34	1	7	1	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGCCTAATGCCATG	NA	False	NA	NA	False	AATAAA	-25	NA	69246614	69282061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.32	chr8	+	7464	16	FSM	ENSMUSG00000031864.17	ENSMUST00000110241.8	2322	16	32	-5174	-7	184	multi-exon	FALSE	canonical	3	438	junction_4	82.2904341679855	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTCTTCTATTTTTC	NA	False	NA	54	True	TTTAAA	-31	NA	69246618	69280337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.33	chr8	+	2700	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-6	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	220.857435737209	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246619	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279385_69279673_69279928
ES.33067.34	chr8	+	4505	16	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	-6	160	intron_retention	FALSE	canonical	2	5	junction_11	176.411261923193	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246619	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69263385_69264562_69264646_69266217_69266371_69266885_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.35	chr8	+	2491	18	FSM	ENSMUSG00000031864.17	ENSMUST00000110242.8	4250	18	12	1747	-6	160	multi-exon	FALSE	canonical	3	21	junction_16	214.082317705889	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246619	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276920_69279928
ES.33067.37	chr8	+	1296	9	ISM	ENSMUSG00000031864.17	ENSMUST00000110241.8	2322	16	34	13897	-5	-5998	5prime_fragment	FALSE	canonical	3	438	junction_4	90.4087074069749	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGAATTAAGTGTAAG	NA	False	NA	NA	False	ATTAAA	-3	NA	69246620	69261266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027
ES.33067.39	chr8	+	3007	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	-4	-814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	225.067342352794	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGTTATTGTCCATA	NA	False	NA	NA	False	AATAAA	-13	NA	69246621	69281246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280814_69281010
ES.33067.4	chr8	+	4058	19	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	245.533238050685	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGCCTAATGCCATG	NA	False	NA	NA	False	AATAAA	-25	NA	69246598	69282061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276920_69279928_69280809_69281010
ES.33067.40	chr8	+	2402	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	42	1757	-3	152	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTTATTTTTAGT	NA	False	NA	22	True	AATAAA	-24	NA	69246622	69280305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.41	chr8	+	2437	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-2	151	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	276.818529491608	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246623	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266283_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276819_69276920_69279928
ES.33067.43	chr8	+	3156	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	3	-816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	217.168424425546	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAGTGTTATTGTCCA	NA	False	NA	NA	False	AATAAA	-11	NA	69246628	69281244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266885_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.44	chr8	+	2747	19	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	3	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	250.822400401579	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246628	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276705_69276771_69279385_69279673_69279928
ES.33067.45	chr8	+	7968	15	NIC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	3	160	intron_retention	FALSE	canonical	3	438	junction_4	81.7994062150995	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246628	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.48	chr8	+	2447	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	6	151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	174.850818110039	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246631	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263175_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.49	chr8	+	2366	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	7	144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	174.850818110039	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTTAAAAAAAAACTTA	NA	False	NA	14	True	AATAAA	-16	NA	69246632	69280297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261144_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.50	chr8	+	2435	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	7	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	220.099125395809	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246632	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260081_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.51	chr8	+	2250	16	NIC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	7	144	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	178.936438125075	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTTAAAAAAAAACTTA	NA	False	NA	14	True	AATAAA	-16	NA	69246632	69280297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.52	chr8	+	5294	17	NIC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	7	175	intron_retention	FALSE	canonical	3	14	junction_16	171.658773079036	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGGTACATTTGTCTT	NA	False	NA	45	True	TTTAAA	-22	NA	69246632	69280328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69277782_69279928
ES.33067.53	chr8	+	2837	22	NNC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	298.160695688608	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGATTTCAATTGGCT	NA	False	NA	NA	False	ACTAAA	-35	NA	69246632	69284319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276705_69276771_69277703_69277782_69279385_69279673_69279928_69280012_69281791_69281922_69284140
ES.33067.55	chr8	+	2116	16	FSM	ENSMUSG00000031864.17	ENSMUST00000110241.8	2322	16	52	154	13	-154	multi-exon	FALSE	canonical	3	438	junction_4	82.2904341679855	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTTTTCAAGGGTCT	NA	False	NA	NA	False	NA	NA	NA	69246638	69275009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.56	chr8	+	2899	20	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	17	141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	269.776998294636	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAGTTTTAAAAAAAAAC	NA	False	NA	11	True	AATAAA	-13	NA	69246642	69280294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276920_69277185_69277349_69279385_69279673_69279928
ES.33067.57	chr8	+	2481	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	18	173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	256.13410198701	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGGTACATTTGTC	NA	False	NA	43	True	AATAAA	-45	NA	69246643	69280326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260288_69261027_69261162_69263003_69263079_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.58	chr8	+	2782	17	NNC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	18	-2190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	174.66754134641	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGCCAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	69246643	69277963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277185
ES.33067.59	chr8	+	3123	16	NIC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	18	150	intron_retention	FALSE	canonical	3	438	junction_4	81.6047384245139	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTTATTTTTA	NA	False	NA	20	True	AATAAA	-22	NA	69246643	69280303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.62	chr8	+	3245	19	NNC	ENSMUSG00000031864.17	novel	4192	18	NA	NA	-19	-764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	247.052600986755	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGTAGTTTATATTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	69246646	69281296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69277703_69277782_69279928_69280809_69281010
ES.33067.63	chr8	+	2495	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-12	151	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_17	215.891072111148	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69246653	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276841_69276967_69279928
ES.33067.64	chr8	+	3040	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	-11	-815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.611568966965	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTGTTATTGTCCAT	NA	False	NA	NA	False	AATAAA	-12	NA	69246654	69281245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.66	chr8	+	2226	16	ISM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	679	1758	594	151	3prime_fragment	FALSE	canonical	3	438	junction_3	80.8275530579352	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTATTTTTAG	NA	False	NA	21	True	AATAAA	-23	NA	69247259	69280304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ES.33067.68	chr8	+	8266	9	ISM	ENSMUSG00000031864.17	ENSMUST00000070713.8	4192	18	13480	0	-4454	0	intron_retention	FALSE	canonical	3	567	junction_8	64.1432722504862	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGGCCTAATGCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	69260145	69282060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.69	chr8	+	8933	9	ISM	ENSMUSG00000031864.17	ENSMUST00000070713.8	4192	18	13490	-677	-4444	675	intron_retention	FALSE	canonical	3	567	junction_8	64.1432722504862	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGACTCCATTCCCAT	NA	False	NA	NA	False	AATAAA	-13	NA	69260155	69282737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ES.33067.7	chr8	+	3104	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-9	-812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	221.215766221383	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTATTGTCCATATT	NA	False	NA	NA	False	AATAAA	-15	NA	69246598	69281248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257575_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928_69280809_69281010
ES.33067.8	chr8	+	2581	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-9	160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	219.057275536326	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTTTAGTTTCAAGTA	NA	False	NA	30	True	AATAAA	-32	NA	69246598	69280313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69276819_69276967_69279928
ES.33067.9	chr8	+	4358	18	NNC	ENSMUSG00000031864.17	novel	4250	18	NA	NA	-9	-17	intron_retention	FALSE	canonical	0	0	junction_16	220.857435737209	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	ACTAAA	-18	NA	69246598	69284302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69276920_69281791_69281922_69284140
ES.33068.1	chr8	-	178	1	Intergenic	novelGene_26980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	69274249	69274071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69274100_69274200
ES.33069.1	chr8	+	2191	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	23	1901	23	-1901	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGAACGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	69333165	69357685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ES.33069.10	chr8	+	1426	1	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	25009	9	14756	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGATACTAAGTCATCA	NA	False	NA	4	True	AATAAA	-15	NA	69358151	69359577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69358200_69359600
ES.33069.2	chr8	+	3199	11	NNC	ENSMUSG00000015568.17	novel	1900	11	NA	NA	1	-339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5031167569588	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCGGCATCCCCATTAT	NA	False	NA	13	True	AATAAA	-15	NA	69333207	69359247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157_69357826_69358337
ES.33069.3	chr8	+	3325	11	NNC	ENSMUSG00000015568.17	novel	1900	11	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5031167569588	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGTCATCATTTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	69333274	69359584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157_69357816_69358471
ES.33069.4	chr8	+	2436	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	134	1545	-32	-1545	multi-exon	FALSE	canonical	3	87	junction_5	14.4871164560059	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGGAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	69333276	69358041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ES.33069.5	chr8	+	3020	9	NIC	ENSMUSG00000015568.17	novel	4115	10	NA	NA	-19	-1901	intron_retention	FALSE	canonical	3	87	junction_5	15.3455001547685	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGAACGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	69333289	69357685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69355038_69357157
ES.33069.6	chr8	+	3848	11	NNC	ENSMUSG00000015568.17	novel	1900	11	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5031167569588	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTCATCATTTTGTAT	NA	False	NA	12	True	AATAAA	-23	NA	69333289	69359585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157_69358042_69358160
ES.33069.8	chr8	+	1543	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	218	2354	52	-2354	multi-exon	FALSE	canonical	3	87	junction_5	14.4871164560059	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATACCCTTGTT	NA	False	NA	NA	False	AGTAAA	-9	NA	69333360	69357232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ES.33069.9	chr8	+	1915	10	NNC	ENSMUSG00000015568.17	novel	4115	10	NA	NA	206	-1922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.5091058198152	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69333514	69357664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69333587_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ES.3307.1	chr10	+	205	1	Intergenic	novelGene_2568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGGCAGAGA	78	False	NA	NA	False	NA	NA	NA	80047333	80047538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80047300_80047500
ES.33070.1	chr8	-	2364	1	Antisense	novelGene_ENSMUSG00000015568.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATGTTTGAACAATCTG	NA	False	NA	NA	False	AATAGA	-22	NA	69333450	69331086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_69331100_69333400
ES.33071.1	chr8	-	1401	7	NNC	ENSMUSG00000110594.2	novel	527	2	NA	NA	-26150	14292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.13991411612474	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGTGTCCATGTAGTCT	NA	False	NA	NA	False	NA	NA	NA	69480485	69409504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69410117_69423914_69424161_69454172_69454288_69454986_69455089_69460610_69460716_69480157_69480317_69480423
ES.33071.2	chr8	-	881	4	NNC	ENSMUSG00000110594.2	novel	527	2	NA	NA	-26101	18	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTCTACTAGTATAAT	NA	False	NA	NA	False	NA	NA	NA	69480436	69423778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69424161_69454172_69454288_69460610_69460716_69480157
ES.33072.1	chr8	+	1164	1	Intergenic	novelGene_26981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	69480818	69481982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_69480800_69482000
ES.33073.1	chr8	+	173	1	Intergenic	novelGene_26982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69539274	69539447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_69539300_69539400
ES.33074.1	chr8	+	7245	8	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	23	-2	intron_retention	FALSE	canonical	3	1247	junction_7	73.8274325431839	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAAATGACTCTGTGT	NA	False	NA	16	True	AATAAA	-20	NA	69541320	69566361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69541581_69548871_69548928_69554016_69555243_69555413_69556130_69556296_69556421_69558460_69560317_69560934_69562662_69565081
ES.33074.10	chr8	+	2749	13	ISM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	121	2375	-1	-2375	5prime_fragment	FALSE	canonical	3	1214	junction_12	86.5506836098556	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTACTCTTAACCTC	NA	False	NA	NA	False	NA	NA	NA	69541418	69563988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531
ES.33074.11	chr8	+	2603	15	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	357.480468996959	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAATGACTCTGTGTT	NA	False	NA	17	True	AATAAA	-21	NA	69541418	69566362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081_69565410_69565509
ES.33074.12	chr8	+	2662	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	366.515287022659	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTACCTGAAATGACTC	NA	False	NA	11	True	AATAAA	-15	NA	69541419	69566356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541547_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.13	chr8	+	2104	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	122	599	0	-599	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTGAGTTGGGAATT	NA	False	NA	NA	False	NA	NA	NA	69541419	69565764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.15	chr8	+	2706	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	370.4583759129	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGAAATGACTCTGTGT	NA	False	NA	16	True	AATAAA	-20	NA	69541421	69566361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558453_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.16	chr8	+	2857	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	370.813754109373	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTGTTTTCTCTCG	NA	False	NA	25	True	AATAAA	-29	NA	69541421	69566370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562382_69562662_69565081
ES.33074.17	chr8	+	2706	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	370.813754109373	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGACTCTGTGTTTTCT	NA	False	NA	21	True	AATAAA	-25	NA	69541425	69566366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561046_69562531_69562662_69565081
ES.33074.18	chr8	+	2674	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	6	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	368.069503984388	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAATGGAAGTTACCT	NA	False	NA	1	True	AATAAA	-5	NA	69541425	69566346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541575_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.19	chr8	+	2807	15	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	474.550490851444	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCTGAAATGACTCTGT	NA	False	NA	14	True	AATAAA	-18	NA	69541425	69566359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69548928_69551137_69551252_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.2	chr8	+	1785	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	32	1008	32	-1008	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTGTGCCAGTGTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	69541329	69565355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.20	chr8	+	7709	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	365.48113704877	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAATGACTCTGTGTT	NA	False	NA	17	True	AATAAA	-21	NA	69541427	69566362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69541581_69548871_69551684_69551757_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.22	chr8	+	4723	13	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	1214	junction_11	91.3521878348966	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCTGAAATGACTCT	NA	False	NA	12	True	AATAAA	-16	NA	69541433	69566357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.23	chr8	+	9659	10	NNC	ENSMUSG00000006273.15	novel	766	5	NA	NA	-5725	0	intron_retention	FALSE	non_canonical	0	0	junction_1	431.35560077619	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69549139	69566363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69551692_69551740_69554116_69554587_69554894_69555102_69555516_69556031_69556130_69556296_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.24	chr8	+	6927	11	NNC	ENSMUSG00000006273.15	novel	766	5	NA	NA	-4958	0	intron_retention	FALSE	non_canonical	0	0	junction_1	401.532576511545	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69549906	69566363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69551692_69551740_69554116_69554587_69554682_69554815_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.25	chr8	+	4710	11	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-2607	-7	intron_retention	FALSE	canonical	3	1214	junction_9	77.1057066629961	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTACCTGAAATGACTC	NA	False	NA	11	True	AATAAA	-15	NA	69552257	69566356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.26	chr8	+	3490	10	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-1177	-6	intron_retention	FALSE	canonical	3	1214	junction_8	52.7828067779464	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCTGAAATGACTCT	NA	False	NA	12	True	AATAAA	-16	NA	69553687	69566357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69554682_69554815_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.27	chr8	+	2838	1	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-489	1498	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	777	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACGAAAAAAAATGAGCTAA	NA	False	NA	NA	False	NA	NA	NA	69554375	69557213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69554400_69557200
ES.33074.3	chr8	+	2785	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	47	-7	47	7	multi-exon	FALSE	canonical	3	1214	junction_12	88.1479391228044	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTGTGTTTTCTCTCG	NA	False	NA	25	True	AATAAA	-29	NA	69541344	69566370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.6	chr8	+	3180	13	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	1214	junction_11	85.2706068284312	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAATGACTCTGTGTT	NA	False	NA	17	True	AATAAA	-21	NA	69541413	69566362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69541581_69548871_69548928_69554016_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.7	chr8	+	3042	12	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	1214	junction_10	83.6420946653059	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCTGAAATGACTCT	NA	False	NA	12	True	AATAAA	-16	NA	69541417	69566357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33074.8	chr8	+	3224	13	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	-1	4	intron_retention	FALSE	canonical	3	1214	junction_11	88.2667595039794	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGACTCTGTGTTTTCTC	NA	False	NA	22	True	AATAAA	-26	NA	69541418	69566367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ES.33075.1	chr8	-	2660	17	FSM	ENSMUSG00000036330.13	ENSMUST00000037478.13	3115	17	52	403	39	-403	multi-exon	FALSE	canonical	0	0	junction_6	1.29753371825167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAGAAAAACAAACAAACAA	NA	False	NA	NA	False	AATAAA	-13	NA	69541822	69490765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69491558_69492892_69493027_69493233_69493354_69493629_69493694_69495365_69495418_69496576_69496656_69503931_69504028_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207_69526563_69527685_69527958_69529840_69529916_69541632
ES.33075.2	chr8	-	1898	15	ISM	ENSMUSG00000036330.13	ENSMUST00000037478.13	3115	17	14141	676	427	-676	3prime_fragment	FALSE	canonical	0	0	junction_6	1.3343958351621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGACCTGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	69527733	69491038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_69491558_69492892_69493027_69493233_69493354_69493629_69493694_69495365_69495418_69496576_69496656_69503931_69504028_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207_69526563_69527685
ES.33076.1	chr8	-	204	1	Intergenic	novelGene_26983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTAATCATCATCTACTA	NA	False	NA	NA	False	NA	NA	NA	69553225	69553021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69553000_69553200
ES.33077.1	chr8	-	5015	4	FSM	ENSMUSG00000036306.14	ENSMUST00000185176.8	5019	4	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGGTCACTTTTGTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	69636873	69585320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69588812_69591003_69591802_69593260_69593739_69636625
ES.33078.1	chr8	-	165	1	Intergenic	novelGene_26984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTAGGTTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	69644579	69644414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69644400_69644600
ES.33079.1	chr8	+	3011	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	-7	-3	-7	3	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCCTTGTCCTGTAAAT	7193	False	NA	30	True	AATAAA	-21	NA	69661682	69683191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ES.33079.10	chr8	+	2879	3	FSM	ENSMUSG00000059897.6	ENSMUST00000110216.2	1323	3	-1	-1555	-1	-1	multi-exon	FALSE	canonical	3	94	junction_1	1	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGACCCTTGTCCTGT	NA	False	NA	26	True	AATAAA	-17	NA	69678993	69683187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69679122_69679323_69679382_69680494
ES.33079.2	chr8	+	3876	5	NNC	ENSMUSG00000059897.6	novel	3001	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.0106370941726	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGACCCTTGTCCTGTAA	7201	False	NA	28	True	AATAAA	-19	NA	69661690	69683189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69661812_69670165_69671041_69678994_69679122_69679323_69679382_69680494
ES.33079.3	chr8	+	3056	4	NNC	ENSMUSG00000059897.6	novel	3001	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7908720859755	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7204	False	NA	27	True	AATAAA	-18	NA	69661693	69683188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69661871_69678994_69679122_69679323_69679382_69680494
ES.33079.4	chr8	+	433	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	9	2559	-1	-117	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCCTTTGTAGATTACT	7209	False	NA	NA	False	NA	NA	NA	69661698	69680629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ES.33079.5	chr8	+	4293	2	ISM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	20	3	10	-3	intron_retention	FALSE	canonical	3	90	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATGACCCTTGTCCT	7220	False	NA	24	True	AATAAA	-15	NA	69661709	69683185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_69661812_69678994
ES.33079.6	chr8	+	2918	3	FSM	ENSMUSG00000059897.6	ENSMUST00000212312.2	493	3	15	-2440	13	-2	multi-exon	FALSE	canonical	1	4	junction_2	43	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATGACCCTTGTCCTG	7223	False	NA	25	True	AATAAA	-16	NA	69661712	69683186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69661812_69678994_69679122_69680494
ES.33079.7	chr8	+	3090	5	NNC	ENSMUSG00000059897.6	novel	3001	4	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.0106370941726	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATGACCCTTGTCCTG	7226	False	NA	25	True	AATAAA	-16	NA	69661715	69683186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69661812_69670165_69670283_69678994_69679122_69679323_69679382_69680494
ES.33079.8	chr8	+	3176	3	NIC	ENSMUSG00000059897.6	novel	3001	4	NA	NA	16	-1	intron_retention	FALSE	canonical	3	90	junction_1	3	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGACCCTTGTCCTGT	7226	False	NA	26	True	AATAAA	-17	NA	69661715	69683187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_69661812_69678994_69679382_69680494
ES.33079.9	chr8	+	6965	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	71	-4035	61	4035	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTGAGTCTGGTGTA	7271	False	NA	NA	False	NA	NA	NA	69661760	69687223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ES.3308.1	chr10	+	208	1	Intergenic	novelGene_2569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	336	False	NA	NA	False	TTTAAA	-13	NA	80053524	80053732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80053500_80053700
ES.33080.1	chr8	-	6889	1	Intergenic	novelGene_26985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTTTTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69675853	69668964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69669000_69675900
ES.33080.2	chr8	-	4343	1	Intergenic	novelGene_26986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACACAGAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	69675857	69671514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69671500_69675900
ES.33081.1	chr8	+	2660	6	NNC	ENSMUSG00000079038.4	novel	2002	6	NA	NA	9	180	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	5.74804314527997	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAACAAA	7170	False	NA	NA	False	NA	NA	NA	69723754	69767039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_69723844_69743913_69743975_69752904_69753032_69753409_69753474_69754642_69756504_69766581
ES.33081.2	chr8	+	13775	1	Genic_Genomic	ENSMUSG00000079038.4	novel	NA	NA	NA	NA	2660	3003	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGGTCTTTGTGGTCT	NA	False	NA	6	True	NA	NA	NA	69756087	69769862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_69756100_69769900
ES.33081.3	chr8	+	9047	1	Genic_Genomic	ENSMUSG00000079038.4	novel	NA	NA	NA	NA	4802	417	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTAGGTGGGGCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	69758229	69767276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_69758200_69767300
ES.33081.4	chr8	+	5367	1	Genic_Genomic	ENSMUSG00000079038.4	novel	NA	NA	NA	NA	8265	200	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCCAAATTCATTCTAG	NA	False	NA	NA	False	NA	NA	NA	69761692	69767059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_69761700_69767100
ES.33082.1	chr8	-	176	1	Intergenic	novelGene_26987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69732315	69732139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69732100_69732300
ES.33083.1	chr8	-	3850	1	Antisense	novelGene_ENSMUSG00000079038.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAGAAAA	2527	False	NA	NA	False	NA	NA	NA	69747457	69743607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_69743600_69747500
ES.33084.1	chr8	-	4726	3	Antisense	novelGene_ENSMUSG00000110514.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGATCTGTTTGATCAG	6159	False	NA	NA	False	NA	NA	NA	69785450	69779444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_69779713_69780882_69782415_69782524
ES.33085.1	chr8	-	4482	1	Genic_Genomic	ENSMUSG00000110444.3	novel	NA	NA	NA	NA	6322	3930	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATTATAGTCCAATA	NA	False	NA	NA	False	NA	NA	NA	69819713	69815231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_69815200_69819700
ES.33086.1	chr8	-	4954	1	ISM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	22517	1542	378	-1542	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTATTGACTTTA	NA	False	NA	NA	False	NA	NA	NA	69825657	69820703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_69820700_69825700
ES.33086.10	chr8	-	1278	2	NNC	ENSMUSG00000110444.3	novel	654	2	NA	NA	325	1120	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTGTGTGTATGTG	NA	False	NA	NA	False	ATTAAA	-31	NA	69825710	69823676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69824891_69825646
ES.33086.11	chr8	-	3173	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-21	4516	-4	1119	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTGTGTGTGTATGT	NA	False	NA	NA	False	ATTAAA	-30	NA	69848195	69823677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ES.33086.12	chr8	-	3171	4	NNC	ENSMUSG00000110444.3	novel	7668	4	NA	NA	-1	1104	intron_retention	FALSE	non_canonical	0	0	junction_3	19.7709101684492	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCGTTCACTTCCTAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	69848192	69823692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69826560_69827709_69827771_69827957_69828101_69848092
ES.33086.13	chr8	-	506	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-10	7172	-4	-154	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATCTCCAAATACATAC	NA	False	NA	NA	False	NA	NA	NA	69848184	69826333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ES.33086.2	chr8	-	5786	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	-24	2016	-7	-2016	multi-exon	FALSE	canonical	2	5	junction_3	16.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTTACCTCATCATTTGA	NA	False	NA	NA	False	AATGAA	-25	NA	69848198	69821177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
ES.33086.3	chr8	-	5702	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-52	2018	-35	-2018	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	AATGAA	-23	NA	69848226	69821179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ES.33086.4	chr8	-	5631	4	NNC	ENSMUSG00000110444.3	novel	7668	4	NA	NA	12	-2018	intron_retention	FALSE	canonical	0	0	junction_3	19.7709101684492	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	AATGAA	-23	NA	69848162	69821179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69826560_69827709_69827771_69827957_69828078_69848092
ES.33086.5	chr8	-	5077	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	-10	2711	-4	-2711	multi-exon	FALSE	canonical	2	5	junction_3	16.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTTGATCAATGGA	NA	False	NA	NA	False	NA	NA	NA	69848184	69821872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
ES.33086.6	chr8	-	4945	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	12	2711	12	-2711	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTTGATCAATGGA	NA	False	NA	NA	False	NA	NA	NA	69848162	69821872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ES.33086.7	chr8	-	4994	4	NNC	ENSMUSG00000110444.3	novel	7668	4	NA	NA	0	-2718	intron_retention	FALSE	canonical	0	0	junction_3	19.7709101684492	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACTGATGTGTTGAT	NA	False	NA	NA	False	NA	NA	NA	69848180	69821879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69826560_69827709_69827771_69827957_69828123_69848092
ES.33086.8	chr8	-	3300	5	NNC	ENSMUSG00000110444.3	novel	7778	5	NA	NA	0	1124	intron_retention	FALSE	non_canonical	0	0	junction_3	18.1159460144923	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTATGTGTGTC	NA	False	NA	NA	False	ATTAAA	-35	NA	69848191	69823672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_69826560_69827709_69827771_69827957_69828101_69829137_69829248_69848092
ES.33086.9	chr8	-	3274	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	-7	4511	-1	1124	multi-exon	FALSE	canonical	2	5	junction_3	16.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTATGTGTGTC	NA	False	NA	NA	False	ATTAAA	-35	NA	69848181	69823672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
ES.33087.1	chr8	-	363	2	Intergenic	novelGene_26988	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGTGGTTTTGTTTT	9938	False	NA	NA	False	AATAAA	-16	NA	70001104	69998503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_69998635_70000872
ES.33088.1	chr8	+	1910	1	Intergenic	novelGene_26990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70061353	70063263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70061400_70063300
ES.33089.1	chr8	-	4937	10	Fusion	ENSMUSG00000060427.16_ENSMUSG00000111594.2	novel	1480	6	NA	NA	16	3065	multi-exon	FALSE	canonical	0	0	junction_1	54.117156860525	96	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACAGCTTTATTGAAC	NA	False	NA	NA	False	NA	NA	NA	70078180	70004388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70007614_70017339_70017508_70019411_70019532_70023186_70023486_70026785_70026870_70028451_70028852_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ES.33089.10	chr8	-	3388	4	NIC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	0	194	intron_retention	FALSE	canonical	3	55	junction_3	38.8529993122224	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCCTCTTTAGTGCCTC	NA	False	NA	-34	True	NA	NA	NA	70078196	70063313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70066106_70066398_70066526_70071964_70072323_70078085
ES.33089.11	chr8	-	2272	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-4	-9	-4	9	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTACTCATTTCTTTG	NA	False	NA	3	True	AATAAA	-32	NA	70078203	70063498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ES.33089.12	chr8	-	2406	6	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.0567997919336	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTAGTACTCATTTCT	NA	False	NA	0	True	AATAAA	-29	NA	70078208	70063501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072326_70076987_70077117_70078085
ES.33089.13	chr8	-	2394	6	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.0567997919336	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACTTAGTACTCATTT	NA	False	NA	-2	True	AATAAA	-27	NA	70078210	70063503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70075782_70075903_70078085
ES.33089.14	chr8	-	2416	6	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.0567997919336	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTATTACTTAGTACT	NA	False	NA	-7	True	AATAAA	-22	NA	70078205	70063508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072326_70076987_70077137_70078085
ES.33089.15	chr8	-	2347	6	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.0567997919336	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTACCACTTATTACTT	NA	False	NA	-13	True	AATAAA	-16	NA	70078196	70063514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072326_70076987_70077083_70078085
ES.33089.3	chr8	-	4218	5	ISM	ENSMUSG00000111594.2	ENSMUST00000216296.2	1480	6	24	6765	24	-6765	5prime_fragment	FALSE	canonical	0	0	junction_3	39.8834238750888	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAATATAAATATGT	4911	False	NA	NA	False	AATAAA	-7	NA	70037790	70014218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70017508_70019411_70019532_70023186_70023486_70028451_70028852_70037680
ES.33089.4	chr8	-	3522	1	Intergenic	novelGene_26989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70061281	70057759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70057800_70061300
ES.33089.5	chr8	-	2447	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	370	203	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	46.3215662515852	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	-25	True	NA	NA	NA	70077826	70063304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70077727
ES.33089.6	chr8	-	2467	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	-5	-203	-5	203	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	-25	True	NA	NA	NA	70078204	70063304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ES.33089.7	chr8	-	2454	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-1	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.3443652905949	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCCTCCCATACTTT	NA	False	NA	-25	True	NA	NA	NA	70078200	70063304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072314_70078085
ES.33089.8	chr8	-	2588	6	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-1	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.0567997919336	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTTTAGTGCCTCCC	NA	False	NA	-32	True	NA	NA	NA	70078200	70063311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072326_70076987_70077117_70078085
ES.33089.9	chr8	-	2730	5	NNC	ENSMUSG00000060427.16	novel	2259	5	NA	NA	-1150	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	56.3443652905949	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCTTTAGTGCCTCCC	NA	False	NA	-32	True	NA	NA	NA	70073153	70063311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072458_70072899
ES.3309.1	chr10	+	2574	15	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	-6363	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	185.531668455819	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	1855	False	NA	16	True	TATAAA	-14	NA	80055904	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80056009_80058171_80058276_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.10	chr10	+	2973	6	ISM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	14	7018	-3	-232	5prime_fragment	FALSE	canonical	3	168	junction_1	133.473592893875	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAGTACACTGTAGCT	8453	False	NA	NA	False	NA	NA	NA	80062502	80072716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944
ES.3309.11	chr10	+	2539	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-2	118	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	165.638231301349	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACATGTTGCCCTGGCA	8454	False	NA	6	True	NA	NA	NA	80062503	80079855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079402
ES.3309.13	chr10	+	2533	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	241	-134	3	134	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCATTGTTCTGCTTA	8459	False	NA	22	True	NA	NA	NA	80062508	80079871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.14	chr10	+	4065	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_7	159.549773354633	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8459	False	NA	17	True	TATAAA	-15	NA	80062508	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80073684_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.15	chr10	+	2993	13	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	168	junction_1	107.716706637777	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8459	False	NA	17	True	TATAAA	-15	NA	80062508	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077720_80079419
ES.3309.16	chr10	+	3480	13	NNC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_10	167.143713113396	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8460	False	NA	14	True	TATAAA	-12	NA	80062509	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076388_80076597_80077035_80077630_80077720_80079419
ES.3309.17	chr10	+	2516	15	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	196.320437768752	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8463	False	NA	16	True	TATAAA	-14	NA	80062512	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80070366_80070491_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.18	chr10	+	4524	13	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	168	junction_1	109.625973959946	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8464	False	NA	16	True	TATAAA	-14	NA	80062513	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.19	chr10	+	5501	12	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	168	junction_1	111.568827661606	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8464	False	NA	17	True	TATAAA	-15	NA	80062513	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.2	chr10	+	4097	12	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	12	0	intron_retention	FALSE	canonical	3	7	junction_1	153.522173809648	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8230	False	NA	16	True	TATAAA	-14	NA	80062279	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062439_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077720_80079419
ES.3309.20	chr10	+	3492	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	25	-125	0	122	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGCCCTGGCATTCA	8464	False	NA	10	True	NA	NA	NA	80062513	80079859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.22	chr10	+	3834	12	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	168	junction_1	111.548677437326	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8465	False	NA	16	True	TATAAA	-14	NA	80062514	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.23	chr10	+	2352	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.803619492116	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8465	False	NA	16	True	TATAAA	-14	NA	80062514	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075792_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.24	chr10	+	2659	15	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	196.471371960395	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8468	False	NA	16	True	TATAAA	-14	NA	80062517	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80066357_80066630_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.25	chr10	+	2489	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8468	False	NA	16	True	TATAAA	-14	NA	80062517	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.26	chr10	+	5705	10	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	168	junction_1	118.342983435416	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8468	False	NA	16	True	TATAAA	-14	NA	80062517	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074755_80075753_80077035_80077630_80077720_80079419
ES.3309.27	chr10	+	3318	13	NNC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	4	0	intron_retention	FALSE	canonical	2	9	junction_2	171.248094068875	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8468	False	NA	14	True	TATAAA	-12	NA	80062517	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064230_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.28	chr10	+	5410	12	NNC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	4	0	intron_retention	FALSE	canonical	2	7	junction_5	179.27097546627	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8468	False	NA	17	True	TATAAA	-15	NA	80062517	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80070366_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.29	chr10	+	3950	12	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	4	116	intron_retention	FALSE	canonical	3	168	junction_1	111.548677437326	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGACATGTTGCCCTGG	8468	False	NA	4	True	NA	NA	NA	80062517	80079853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.3	chr10	+	3450	13	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	64	0	intron_retention	FALSE	canonical	3	7	junction_1	148.773387517168	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8282	False	NA	17	True	TATAAA	-15	NA	80062331	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062439_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.30	chr10	+	4916	12	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	168	junction_1	113.86522408619	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8468	False	NA	16	True	TATAAA	-14	NA	80062517	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074226_80074693_80074755_80075753_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.31	chr10	+	4989	12	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	168	junction_1	114.364069951483	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8468	False	NA	17	True	TATAAA	-15	NA	80062517	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.32	chr10	+	4508	12	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_2	152.083926373424	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8476	False	NA	17	True	TATAAA	-15	NA	80062525	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80064273_80064828_80065105_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80077035_80077630_80077720_80079419
ES.3309.33	chr10	+	3452	13	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	16	1	intron_retention	FALSE	canonical	3	97	junction_1	125.203917004754	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTGTCATAGTCATTG	8480	False	NA	15	True	TATAAA	-13	NA	80062529	80079733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.34	chr10	+	2943	13	NIC	ENSMUSG00000020156.17	novel	2858	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	97	junction_1	127.172755424353	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8480	False	NA	14	True	TATAAA	-12	NA	80062529	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.35	chr10	+	6124	12	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	17	0	intron_retention	FALSE	canonical	3	405	junction_2	55.0835578653688	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8481	False	NA	16	True	TATAAA	-14	NA	80062530	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.36	chr10	+	4965	12	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	17	0	intron_retention	FALSE	canonical	3	469	junction_6	45.5497185447301	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8481	False	NA	14	True	TATAAA	-12	NA	80062530	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.37	chr10	+	2559	15	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.029796276719	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCATAGTCATTGCAC	8482	False	NA	18	True	TATAAA	-16	NA	80062531	80079736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062641_80063984_80064067_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.38	chr10	+	3916	12	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	19	0	intron_retention	FALSE	canonical	3	97	junction_1	130.658345718079	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8483	False	NA	14	True	TATAAA	-12	NA	80062532	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.4	chr10	+	2473	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	144.281488518084	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8282	False	NA	16	True	TATAAA	-14	NA	80062331	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062439_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.40	chr10	+	4037	14	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	175.502962769374	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8498	False	NA	16	True	TATAAA	-14	NA	80062547	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80070366_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.41	chr10	+	3828	12	NIC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	-33	0	intron_retention	FALSE	canonical	3	97	junction_1	130.20060809039	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8502	False	NA	17	True	TATAAA	-15	NA	80062551	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.42	chr10	+	5366	11	NIC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	-24	0	intron_retention	FALSE	canonical	3	97	junction_1	133.043789783665	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8511	False	NA	14	True	TATAAA	-12	NA	80062560	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80074755_80075753_80075830_80076225_80077035_80077630_80077720_80079419
ES.3309.43	chr10	+	3831	12	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	-20	0	intron_retention	FALSE	canonical	2	2	junction_11	188.805729006789	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8515	False	NA	16	True	TATAAA	-14	NA	80062564	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80076277_80076597_80077035_80077630_80077720_80079402
ES.3309.45	chr10	+	3622	14	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_6	207.755631372206	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8524	False	NA	16	True	TATAAA	-14	NA	80062573	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80073470_80073684_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.46	chr10	+	3951	12	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	73	1	intron_retention	FALSE	canonical	1	3	junction_1	156.464977730476	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTGTCATAGTCATTG	8608	False	NA	15	True	TATAAA	-13	NA	80062657	80079733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062800_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.47	chr10	+	3420	14	NNC	ENSMUSG00000020156.17	novel	3847	7	NA	NA	191	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.022451058109	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8726	False	NA	16	True	TATAAA	-14	NA	80062775	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80063830_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.48	chr10	+	2367	13	ISM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	1887	3	1570	0	3prime_fragment	FALSE	canonical	3	405	junction_2	54.231691739138	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	NA	False	NA	16	True	TATAAA	-14	NA	80064154	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.49	chr10	+	3737	11	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	1570	0	intron_retention	FALSE	canonical	3	469	junction_6	47.7599204354446	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	NA	False	NA	14	True	TATAAA	-12	NA	80064154	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.5	chr10	+	2572	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	65	3	65	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8283	False	NA	16	True	TATAAA	-14	NA	80062332	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.51	chr10	+	176	1	Intergenic	novelGene_2570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATATACATAA	NA	False	NA	NA	False	NA	NA	NA	80067053	80067229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80067100_80067200
ES.3309.52	chr10	+	5482	9	NNC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	-1636	1	intron_retention	FALSE	canonical	2	7	junction_2	181.161530132642	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGTGTCATAGTCATTG	NA	False	NA	15	True	TATAAA	-13	NA	80068391	80079733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80068882_80070056_80070162_80070366_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.53	chr10	+	5610	6	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	19	0	intron_retention	FALSE	canonical	3	518	junction_5	36.2579646422686	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	NA	False	NA	16	True	TATAAA	-14	NA	80070112	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.54	chr10	+	4049	2	FSM	ENSMUSG00000020156.17	ENSMUST00000126917.8	663	2	-3386	0	2041	0	multi-exon	FALSE	canonical	3	518	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	NA	False	NA	16	True	TATAAA	-14	NA	80073985	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80077720_80079419
ES.3309.55	chr10	+	3041	2	NIC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	-1274	0	intron_retention	FALSE	canonical	3	555	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	504	False	NA	16	True	TATAAA	-14	NA	80076097	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80077035_80077630
ES.3309.6	chr10	+	3179	12	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-48	0	intron_retention	FALSE	canonical	3	168	junction_1	107.047529414363	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTGTCATAGTCATT	8391	False	NA	14	True	TATAAA	-12	NA	80062440	80079732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80077035_80077630_80077720_80079419
ES.3309.7	chr10	+	3403	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	-10	-1	-10	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	8429	False	NA	17	True	TATAAA	-15	NA	80062478	80079735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.8	chr10	+	2361	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	165.014290218549	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8451	False	NA	16	True	TATAAA	-14	NA	80062500	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064230_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ES.3309.9	chr10	+	3415	13	NNC	ENSMUSG00000020156.17	novel	3392	13	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	229.741823696852	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8453	False	NA	16	True	TATAAA	-14	NA	80062502	80079734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074230_80074693_80074755_80075753_80075830_80076303_80076388_80076597_80077035_80077630_80077720_80079419
ES.33090.1	chr8	+	2733	4	FSM	ENSMUSG00000091764.4	ENSMUST00000204285.3	4333	4	-1	1601	-1	1211	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTGTAGTTTCATATA	NA	False	NA	NA	False	NA	NA	NA	70107140	70118031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70107247_70111912_70112040_70112223_70112285_70115592
ES.33090.2	chr8	+	2761	1	ISM	ENSMUSG00000091764.4	ENSMUST00000204062.2	3561	3	5645	5	861	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAACTATTACTAAATT	NA	False	NA	NA	False	NA	NA	NA	70112773	70115534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70112800_70115500
ES.33091.1	chr8	-	177	1	Intergenic	novelGene_26991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAGAAGAGA	7902	False	NA	NA	False	NA	NA	NA	70131328	70131151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70131200_70131300
ES.33092.1	chr8	-	198	1	Intergenic	novelGene_26992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCATGACCTGGGAATG	NA	False	NA	NA	False	NA	NA	NA	70141695	70141497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70141500_70141700
ES.33093.1	chr8	-	5765	4	NIC	ENSMUSG00000054648.9	novel	3180	5	NA	NA	-5	-39	intron_retention	FALSE	canonical	3	68	junction_3	10.6770782520313	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATAAATATACTGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	70169528	70155344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169417
ES.33093.10	chr8	-	3212	6	NIC	ENSMUSG00000054648.9	novel	3783	7	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	39.3629267204561	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169117	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70165926_70166016_70169034
ES.33093.12	chr8	-	3138	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238460.2	882	5	4	-2260	4	-2	multi-exon	FALSE	canonical	2	4	junction_4	33.4542598184446	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169132	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169034
ES.33093.13	chr8	-	3307	4	NIC	ENSMUSG00000054648.9	novel	882	5	NA	NA	2	-2	intron_retention	FALSE	canonical	2	4	junction_3	37.52628708282	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169134	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169034
ES.33093.14	chr8	-	3159	5	NNC	ENSMUSG00000054648.9	novel	6080	5	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.1381203253674	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169484	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169365
ES.33093.15	chr8	-	5358	4	NIC	ENSMUSG00000054648.9	novel	882	5	NA	NA	4	-2	intron_retention	FALSE	canonical	2	4	junction_3	32.3144274623924	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169132	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70160822_70160988_70163635_70169034
ES.33093.16	chr8	-	2685	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	17	478	-12	16	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCATTCTTGGTCCCTGTC	NA	False	NA	NA	False	NA	NA	NA	70169535	70158264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ES.33093.17	chr8	-	2702	5	NIC	ENSMUSG00000054648.9	novel	3199	6	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	35.1381203253674	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCACTTGGGTAGAATC	NA	False	NA	NA	False	NA	NA	NA	70169700	70158280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169549
ES.33093.18	chr8	-	2809	4	NIC	ENSMUSG00000054648.9	novel	882	5	NA	NA	4	-7	intron_retention	FALSE	canonical	2	4	junction_3	37.52628708282	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAAGCCCACTTGGG	NA	False	NA	NA	False	NA	NA	NA	70169132	70158287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169034
ES.33093.2	chr8	-	4670	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	353	1057	2	-1057	multi-exon	FALSE	canonical	3	12	junction_4	30.1029483605842	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAATATACACATG	NA	False	NA	NA	False	NA	NA	NA	70169134	70156362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
ES.33093.3	chr8	-	4596	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	3	-1419	1	-1062	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAAAATATAC	NA	False	NA	NA	False	NA	NA	NA	70169549	70156367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ES.33093.4	chr8	-	3181	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70169553	70157786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ES.33093.5	chr8	-	5363	4	NIC	ENSMUSG00000054648.9	novel	3180	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	68	junction_3	2.44948974278318	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70169515	70157786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70160822_70160988_70163635_70169417
ES.33093.6	chr8	-	3658	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	-59	2481	4	0	multi-exon	FALSE	canonical	3	12	junction_4	30.1029483605842	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70169546	70157786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
ES.33093.8	chr8	-	3001	6	NNC	ENSMUSG00000054648.9	novel	2792	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6227766016838	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169527	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70158794_70158942_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ES.33093.9	chr8	-	3348	4	NIC	ENSMUSG00000054648.9	novel	3180	5	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	68	junction_3	10.6770782520313	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTTTGTCAATGT	NA	False	NA	-5	True	NA	NA	NA	70169558	70157791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169417
ES.33094.1	chr8	-	4979	3	NIC	ENSMUSG00000092260.8	novel	2291	4	NA	NA	-1	2748	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	6.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTGTGTGACTGGT	9671	False	NA	NA	False	NA	NA	NA	70202613	70191540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70196261_70197110_70197238_70202481
ES.33094.2	chr8	-	2291	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	-1	1	-1	-1	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTTGGAAAAGGTATC	9671	False	NA	NA	False	AATAAA	-15	NA	70202613	70194289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ES.33094.3	chr8	-	1917	4	NNC	ENSMUSG00000092260.8	novel	2291	4	NA	NA	-36	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.25967446224258	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTCACTCTGTCGT	9628	False	NA	NA	False	NA	NA	NA	70202656	70194565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70196261_70196841_70196903_70197110_70197238_70202622
ES.33094.4	chr8	-	2015	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	-1	277	-1	-277	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTCACTCTGTCGT	9671	False	NA	NA	False	NA	NA	NA	70202613	70194565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ES.33095.1	chr8	+	117	1	Intergenic	novelGene_26994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAATAAAATTA	NA	False	NA	NA	False	AATAAA	-14	NA	70208929	70209046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70208900_70209000
ES.33096.1	chr8	-	2602	2	Intergenic	novelGene_26993	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAAGTGCTCTGTCC	3213	False	NA	NA	False	NA	NA	NA	70209071	70206023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70207708_70208153
ES.33097.1	chr8	+	2179	1	Antisense	novelGene_ENSMUSG00000092544.9_AS_novelGene_ENSMUSG00000043090.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	70217451	70219630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70217500_70219600
ES.33098.1	chr8	+	3787	26	NNC	ENSMUSG00000031862.12	novel	2776	13	NA	NA	-13824	1	intron_retention	TRUE	canonical	0	0	junction_1	95.4739252361607	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGCTGCCACTTATAT	NA	False	NA	NA	False	AATAAA	-21	NA	70229988	70260397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70230091_70235349_70235531_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.11	chr8	+	5475	19	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-19	0	intron_retention	FALSE	canonical	3	87	junction_9	61.1911596939571	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9232	False	NA	NA	False	AATAAA	-23	NA	70243880	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70259554_70259646_70259986_70260068
ES.33098.12	chr8	+	3953	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-19	0	intron_retention	FALSE	canonical	1	2	junction_1	103.624444992482	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9232	False	NA	NA	False	AATAAA	-23	NA	70243880	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70245535_70245616_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.13	chr8	+	3710	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	101.569712020858	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9232	False	NA	NA	False	AATAAA	-20	NA	70243880	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256177_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.14	chr8	+	3720	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_20	79.9742633459763	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9232	False	NA	NA	False	AATAAA	-23	NA	70243880	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258213_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.15	chr8	+	3929	25	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	69	0	-18	0	intron_retention	FALSE	canonical	3	203	junction_10	47.0865043179985	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9233	False	NA	NA	False	AATAAA	-23	NA	70243881	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.16	chr8	+	3617	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.2627697156763	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9233	False	NA	NA	False	AATAAA	-18	NA	70243881	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.18	chr8	+	3855	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-17	0	intron_retention	FALSE	canonical	3	87	junction_13	62.9931654141057	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9234	False	NA	NA	False	AATAAA	-20	NA	70243882	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.19	chr8	+	3863	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-15	0	intron_retention	FALSE	canonical	1	2	junction_23	100.239262378682	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9236	False	NA	NA	False	AATAAA	-20	NA	70243884	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259822_70259986_70260068
ES.33098.2	chr8	+	3019	2	Antisense	novelGene_ENSMUSG00000043090.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTTGTAATA	3807	False	NA	NA	False	AATAAA	-20	NA	70238455	70241682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70239411_70239618
ES.33098.20	chr8	+	7921	19	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	87	junction_9	63.5636164274291	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9237	False	NA	NA	False	AATAAA	-18	NA	70243885	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258028_70258097_70258493_70259410_70259554_70259646_70259986_70260068
ES.33098.21	chr8	+	3975	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-14	-7	intron_retention	FALSE	canonical	3	223	junction_12	43.1860178310742	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATAAAGCTTGCTGC	9237	False	NA	NA	False	AATAAA	-12	NA	70243885	70260388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.22	chr8	+	3909	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-14	0	intron_retention	FALSE	canonical	3	223	junction_12	42.3897262186121	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9237	False	NA	NA	False	AATAAA	-20	NA	70243885	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.24	chr8	+	4087	22	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	87	junction_10	60.6677132301147	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9238	False	NA	NA	False	AATAAA	-17	NA	70243886	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.26	chr8	+	3974	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_18	102.730139686462	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9238	False	NA	NA	False	AATAAA	-17	NA	70243886	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257599_70257739_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.27	chr8	+	4335	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-13	0	intron_retention	FALSE	canonical	3	203	junction_8	48.8962096636406	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9238	False	NA	NA	False	AATAAA	-23	NA	70243886	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.29	chr8	+	3909	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	87	junction_12	61.3653412275183	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9240	False	NA	NA	False	AATAAA	-23	NA	70243888	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.3	chr8	+	3864	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	52	-1	-35	1	multi-exon	FALSE	canonical	3	203	junction_10	47.3625337160081	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGCCACTTATATCTG	9216	False	NA	NA	False	AATAAA	-24	NA	70243864	70260400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.30	chr8	+	3833	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	87	junction_13	63.9445832125147	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9240	False	NA	NA	False	AATAAA	-17	NA	70243888	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.31	chr8	+	3611	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.55710519091	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70250356_70250441_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.32	chr8	+	4021	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	203	junction_9	47.745584421578	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.33	chr8	+	4327	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	87	junction_10	62.5037519534985	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9240	False	NA	NA	False	AATAAA	-17	NA	70243888	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.34	chr8	+	3766	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	76.2118520966391	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256177_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.35	chr8	+	3836	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	87	junction_12	60.2107410129898	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9240	False	NA	NA	False	AATAAA	-20	NA	70243888	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.36	chr8	+	4411	22	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	87	junction_10	62.8736991182826	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.38	chr8	+	4773	22	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	223	junction_9	44.2456552051741	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.39	chr8	+	3908	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	87	junction_11	59.3080771490939	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGCTGCCACTTAT	9240	False	NA	NA	False	AATAAA	-19	NA	70243888	70260395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.4	chr8	+	4401	24	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_16	77.1968734981074	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9228	False	NA	NA	False	AATAAA	-23	NA	70243876	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70255712_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.40	chr8	+	3787	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	84.6088978772327	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9240	False	NA	NA	False	AATAAA	-18	NA	70243888	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251210_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.42	chr8	+	5293	22	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	87	junction_11	61.9428088209265	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9240	False	NA	NA	False	AATAAA	-17	NA	70243888	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.43	chr8	+	5399	21	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	21	junction_7	91.4422632047129	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9240	False	NA	NA	False	AATAAA	-23	NA	70243888	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249982_70250356_70250491_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.44	chr8	+	3766	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	1	1	junction_9	104.110443160136	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9240	False	NA	NA	False	AATAAA	-23	NA	70243888	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251041_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256177_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.46	chr8	+	3929	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-11	0	intron_retention	FALSE	canonical	3	87	junction_11	60.8038465105012	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9240	False	NA	NA	False	AATAAA	-23	NA	70243888	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.49	chr8	+	4019	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	87	junction_11	61.515922147733	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9242	False	NA	NA	False	AATAAA	-18	NA	70243890	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.50	chr8	+	5289	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	223	junction_12	44.1227626267688	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9242	False	NA	NA	False	AATAAA	-18	NA	70243890	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.52	chr8	+	3687	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	78.5258273153206	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9242	False	NA	NA	False	AATAAA	-17	NA	70243890	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251993_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.53	chr8	+	6463	17	NIC	ENSMUSG00000031862.12	novel	4746	22	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	223	junction_7	44.2344605483101	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAAAGCTTGCTGCCA	9242	False	NA	NA	False	AATAAA	-14	NA	70243890	70260390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.54	chr8	+	3758	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_25	75.7094023223008	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9244	False	NA	NA	False	AATAAA	-18	NA	70243892	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260140
ES.33098.55	chr8	+	4313	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-7	0	intron_retention	FALSE	canonical	3	87	junction_10	61.9916849929445	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9244	False	NA	NA	False	AATAAA	-23	NA	70243892	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.56	chr8	+	4900	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	223	junction_12	42.2782254488932	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9245	False	NA	NA	False	AATAAA	-18	NA	70243893	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.57	chr8	+	3854	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_10	86.1412660014545	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9245	False	NA	NA	False	AATAAA	-23	NA	70243893	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251441_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.60	chr8	+	4071	23	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_19	89.0784777968931	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9245	False	NA	NA	False	AATAAA	-18	NA	70243893	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259315_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.63	chr8	+	3744	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-6	0	combination_of_known_splicesites	TRUE	canonical	1	13	junction_1	76.2856360259839	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9245	False	NA	NA	False	AATAAA	-23	NA	70243893	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.64	chr8	+	3815	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_10	85.8331614075948	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9245	False	NA	NA	False	AATAAA	-23	NA	70243893	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251265_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.65	chr8	+	5065	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_6	104.287255200347	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9246	False	NA	NA	False	AATAAA	-18	NA	70243894	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249888_70249982_70250356_70250491_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.66	chr8	+	4908	23	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	21	junction_8	87.0784295480918	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9246	False	NA	NA	False	AATAAA	-18	NA	70243894	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70254793_70256109_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.67	chr8	+	3902	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_5	78.0720376034567	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9247	False	NA	NA	False	AATAAA	-18	NA	70243895	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249638_70249731_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.68	chr8	+	3967	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	223	junction_12	43.2010729405371	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9247	False	NA	NA	False	AATAAA	-18	NA	70243895	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.69	chr8	+	3907	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_1	102.30281325555	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9247	False	NA	NA	False	AATAAA	-18	NA	70243895	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70245535_70245616_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.7	chr8	+	4923	23	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-20	0	intron_retention	FALSE	canonical	3	21	junction_8	74.7833233718952	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9231	False	NA	NA	False	AATAAA	-23	NA	70243879	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70259554_70259646_70259759_70259841
ES.33098.72	chr8	+	3761	26	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_13	62.842609748482	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9248	False	NA	NA	False	AATAAA	-23	NA	70243896	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.73	chr8	+	3899	24	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	87	junction_12	61.3505530469632	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9249	False	NA	NA	False	AATAAA	-18	NA	70243897	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.74	chr8	+	6162	20	NNC	ENSMUSG00000031862.12	novel	4746	22	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	84.0193553745941	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9250	False	NA	NA	False	AATAAA	-18	NA	70243898	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068_70260108_70260168
ES.33098.75	chr8	+	3860	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_16	86.9127016513313	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9250	False	NA	NA	False	AATAAA	-20	NA	70243898	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256075_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.76	chr8	+	3742	26	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_18	85.2397465974647	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9250	False	NA	NA	False	AATAAA	-23	NA	70243898	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256406_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.77	chr8	+	3833	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	87	junction_13	64.1332705301148	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTTGCTGCCACTT	9250	False	NA	NA	False	AATAAA	-17	NA	70243898	70260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.78	chr8	+	3723	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	102.398249985046	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	9251	False	NA	NA	False	AATAAA	-18	NA	70243899	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249888_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251249_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.80	chr8	+	3771	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	97.4566855354498	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9252	False	NA	NA	False	AATAAA	-20	NA	70243900	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249638_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256234_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.81	chr8	+	3819	26	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	77.7679214072229	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9252	False	NA	NA	False	AATAAA	-23	NA	70243900	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70246398_70246489_70246579_70246763_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.83	chr8	+	3806	27	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	101.612130909301	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGCTGCCACTTATA	9280	False	NA	NA	False	AATAAA	-20	NA	70243928	70260396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70244292_70245535_70245616_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.84	chr8	+	5321	16	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	2438	0	intron_retention	FALSE	canonical	2	10	junction_9	104.04947541114	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	NA	False	NA	NA	False	AATAAA	-23	NA	70246358	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70246771_70249228_70249302_70249479_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70254793_70256177_70256310_70256389_70256487_70257869_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.85	chr8	+	3737	19	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	2666	-1	intron_retention	FALSE	canonical	3	223	junction_10	36.1389636176527	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	70246586	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410
ES.33098.86	chr8	+	3887	17	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-363	0	intron_retention	FALSE	canonical	3	87	junction_7	65.3081338253513	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	1176	False	NA	NA	False	AATAAA	-23	NA	70249239	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258493_70259410_70259554_70259646
ES.33098.87	chr8	+	3987	17	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-605	-1	intron_retention	FALSE	canonical	3	87	junction_6	74.9203743984238	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	2377	False	NA	NA	False	AATAAA	-18	NA	70250440	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.88	chr8	+	5506	12	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-476	-1	intron_retention	FALSE	canonical	3	87	junction_2	81.7372326826127	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	2506	False	NA	NA	False	AATAAA	-18	NA	70250569	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70250647_70251036_70252129_70252481_70252588_70252661_70252773_70253551_70256310_70256389_70256487_70257869_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.89	chr8	+	2187	13	ISM	ENSMUSG00000031862.12	ENSMUST00000238453.2	4211	22	8069	1	-92	-1	intron_retention	FALSE	canonical	3	87	junction_1	77.1007187601603	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	3905	False	NA	NA	False	AATAAA	-18	NA	70251968	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841
ES.33098.9	chr8	+	4412	23	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-20	0	intron_retention	FALSE	canonical	3	223	junction_10	43.6069029337223	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9231	False	NA	NA	False	AATAAA	-23	NA	70243879	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.90	chr8	+	3156	12	NIC	ENSMUSG00000031862.12	novel	4746	22	NA	NA	6	-1	intron_retention	FALSE	canonical	3	223	junction_1	50.4587221858431	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	4003	False	NA	NA	False	AATAAA	-18	NA	70252066	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70252129_70252411_70252773_70253551_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ES.33098.91	chr8	+	2088	14	NNC	ENSMUSG00000031862.12	novel	4746	22	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	94.4136686523851	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	4010	False	NA	NA	False	AATAAA	-18	NA	70252073	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259822_70259986_70260068
ES.33098.92	chr8	+	3280	4	NIC	ENSMUSG00000031862.12	novel	2776	13	NA	NA	-2398	-1	intron_retention	FALSE	canonical	3	356	junction_1	21.2289111041209	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTGCTGCCACTTA	7492	False	NA	NA	False	AATAAA	-18	NA	70255555	70260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70256487_70257869_70259554_70259646_70259759_70259841
ES.33098.93	chr8	+	3504	3	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	-1234	0	intron_retention	FALSE	canonical	3	382	junction_1	13	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	8656	False	NA	NA	False	AATAAA	-23	NA	70256719	70260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70259554_70259646_70259759_70259841
ES.33099.1	chr8	-	6454	4	NNC	ENSMUSG00000043090.19	novel	3245	4	NA	NA	5	7	intron_retention	TRUE	non_canonical	0	0	junction_1	15.8394724940223	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTCAAATCCTTTCC	6874	False	NA	-2	True	NA	NA	NA	70227556	70213968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70219616_70219780_70220344_70221770_70221898_70227439
ES.33099.2	chr8	-	3902	2	NNC	ENSMUSG00000043090.19	novel	3245	4	NA	NA	9190	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACTTGTGTCAAATCC	NA	False	NA	-7	True	NA	NA	NA	70218371	70213973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70215550_70216045
ES.33099.3	chr8	-	5763	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	1	-2519	1	2	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACTTGTGTCAAATCC	6870	False	NA	-7	True	NA	NA	NA	70227560	70213973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
ES.33099.4	chr8	-	5860	5	NNC	ENSMUSG00000043090.19	novel	2680	6	NA	NA	56	2	intron_retention	FALSE	canonical	0	0	junction_3	15.0416089564913	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACTTGTGTCAAATCC	NA	False	NA	-7	True	NA	NA	NA	70243772	70213973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70219428_70220282_70220344_70221770_70221898_70231152_70231313_70243714
ES.33099.5	chr8	-	5901	2	NNC	ENSMUSG00000092544.9	novel	653	4	NA	NA	-714	-18142	intron_retention	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCACTTGTGTCAAAT	NA	False	NA	-9	True	NA	NA	NA	70220043	70213975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70219610_70219776
ES.33099.6	chr8	-	2433	4	NIC	ENSMUSG00000043090.19	novel	2680	6	NA	NA	47	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.8394724940223	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCACTTGTGTCAAAT	6916	False	NA	-9	True	NA	NA	NA	70227514	70213975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70216146_70220282_70220344_70221770_70221898_70227439
ES.33099.7	chr8	-	2313	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	14	918	14	-918	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCACTTGGGTGGAATAA	6883	False	NA	NA	False	NA	NA	NA	70227547	70217410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
ES.331.1	chr1	+	4462	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-11	NA	38155668	38160130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38155700_38160100
ES.3310.1	chr10	+	778	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	-17	-3	-14	1	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTCTGTGTGGACTG	9675	False	NA	26	True	AATAAA	-17	NA	80085268	80092629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.10	chr10	+	1372	7	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	9	0	1	0	intron_retention	FALSE	canonical	3	1255	junction_1	370.244701365042	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9701	False	NA	23	True	AATAAA	-14	NA	80085294	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757
ES.3310.11	chr10	+	1874	6	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	1255	junction_1	366.209229812685	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9701	False	NA	23	True	AATAAA	-14	NA	80085294	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088268_80088907_80089618_80090673_80090854_80090923_80090971_80091757
ES.3310.12	chr10	+	2514	5	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	1255	junction_1	398.252746380989	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9701	False	NA	23	True	AATAAA	-14	NA	80085294	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80089618_80090673_80090854_80090923_80090971_80091757
ES.3310.13	chr10	+	739	8	NNC	ENSMUSG00000020153.15	novel	758	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	793.673453644765	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9702	False	NA	23	True	AATAAA	-14	NA	80085295	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090857_80090935_80090971_80091757_80091847_80092469
ES.3310.14	chr10	+	4156	6	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	2110	junction_5	27.0037034497122	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9702	False	NA	24	True	AATAAA	-15	NA	80085295	80092627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80088268_80088907_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.15	chr10	+	2927	5	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	1255	junction_1	392.906159279795	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9704	False	NA	23	True	AATAAA	-14	NA	80085297	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088268_80088907_80090854_80090923_80090971_80091757
ES.3310.16	chr10	+	2943	5	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	1255	junction_1	386.761150453351	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTGTGTTCTGTGTGG	9704	False	NA	22	True	AATAAA	-13	NA	80085297	80092625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.17	chr10	+	7330	1	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9704	False	NA	24	True	AATAAA	-15	NA	80085297	80092627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085300_80092600
ES.3310.18	chr10	+	4223	6	NNC	ENSMUSG00000020153.15	novel	758	8	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	1057.86040666999	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9704	False	NA	23	True	AATAAA	-14	NA	80085297	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80088268_80088907_80088992_80089542_80089618_80090675_80090854_80090923_80090971_80091757
ES.3310.19	chr10	+	1435	6	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	1255	junction_1	401.997711436272	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9708	False	NA	23	True	AATAAA	-14	NA	80085301	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090971_80091757
ES.3310.20	chr10	+	656	7	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	3	164	junction_2	752.472295540212	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTGTGTGTTCTGTGTG	9708	False	NA	21	True	AATAAA	-12	NA	80085301	80092624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088268_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.21	chr10	+	735	8	NNC	ENSMUSG00000020153.15	novel	758	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	768.810531049791	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9708	False	NA	23	True	AATAAA	-14	NA	80085301	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089500_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.22	chr10	+	2900	4	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	-919	0	intron_retention	FALSE	canonical	3	2157	junction_1	4.49691252107735	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	NA	False	NA	23	True	AATAAA	-14	NA	80088229	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80088268_80088907_80090854_80090923_80090971_80091757
ES.3310.3	chr10	+	712	8	NNC	ENSMUSG00000020153.15	novel	758	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	789.099667795067	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	9696	False	NA	25	True	AATAAA	-16	NA	80085289	80092628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092513
ES.3310.4	chr10	+	1393	7	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1255	junction_1	368.564181053389	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9697	False	NA	23	True	AATAAA	-14	NA	80085290	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.6	chr10	+	4431	2	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	5	0	-3	0	intron_retention	FALSE	canonical	3	1255	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9697	False	NA	23	True	AATAAA	-14	NA	80085290	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80085326_80088230
ES.3310.7	chr10	+	1894	6	NIC	ENSMUSG00000020153.15	novel	758	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1255	junction_1	362.307383308704	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9698	False	NA	23	True	AATAAA	-14	NA	80085291	80092626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ES.3310.9	chr10	+	3002	4	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1255	junction_1	426.390275061084	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80085326_80088230_80088268_80088907_80090971_80091757
ES.33100.1	chr8	+	3895	21	FSM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	-3	41	-3	-41	multi-exon	TRUE	canonical	1	2	junction_20	2.88790581563873	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAATAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	70261325	70274479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.10	chr8	+	2878	13	ISM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	5084	321	-123	216	3prime_fragment	FALSE	canonical	1	2	junction_12	3.17433282579015	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGCTTGCTGTAAAGC	NA	False	NA	NA	False	AATAAA	-35	NA	70266412	70274199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.11	chr8	+	2483	6	ISM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	7787	41	-246	-41	3prime_fragment	FALSE	canonical	1	2	junction_5	2.48193472919817	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAATAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	70269115	70274479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.2	chr8	+	3240	18	NNC	ENSMUSG00000036246.15	novel	3443	19	NA	NA	3	-1	intron_retention	TRUE	canonical	0	0	junction_17	3.70167828765936	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGATATGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	70261342	70271621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70261471_70262423_70262507_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70270372
ES.33100.3	chr8	+	3588	21	FSM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	20	325	9	212	multi-exon	FALSE	canonical	1	2	junction_20	2.88790581563873	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCAGTGGTGCTTGCTGTA	NA	False	NA	NA	False	AATAAA	-31	NA	70261348	70274195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.4	chr8	+	3809	20	NIC	ENSMUSG00000036246.15	novel	3933	21	NA	NA	14	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.47766916561722	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTCTTGCACATTTG	NA	False	NA	NA	False	NA	NA	NA	70261353	70274506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70261471_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.5	chr8	+	3399	19	FSM	ENSMUSG00000036246.15	ENSMUST00000123453.2	3443	19	17	27	17	-27	multi-exon	FALSE	canonical	2	4	junction_6	2.61524495465329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTGTTCTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	70261356	70271595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372
ES.33100.7	chr8	+	4693	20	NNC	ENSMUSG00000036246.15	novel	3933	21	NA	NA	20	-41	intron_retention	FALSE	non_canonical	0	0	junction_11	3.3717089216941	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAATAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	70261359	70274479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267591_70267670_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ES.33100.8	chr8	+	3621	17	NNC	ENSMUSG00000036246.15	novel	3443	19	NA	NA	31	-27	intron_retention	FALSE	canonical	0	0	junction_15	3.44544536308443	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGCTGTTCTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	70261370	70271595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269535_70269576_70269652
ES.33100.9	chr8	+	3467	16	NNC	ENSMUSG00000036246.15	novel	3933	21	NA	NA	698	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	3.81226092146555	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTCTTTGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	70264040	70274519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273026_70273151_70273246
ES.33101.1	chr8	+	2957	3	FSM	ENSMUSG00000031861.17	ENSMUST00000034325.6	5837	3	-88	2968	-88	-2967	multi-exon	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTTTCTTTCTACAGT	246	False	NA	NA	False	ATTAAA	-26	NA	70274990	70280784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70275362_70276203_70276946_70278940
ES.33101.2	chr8	+	1540	2	FSM	ENSMUSG00000031861.17	ENSMUST00000238452.2	1350	2	29	-219	29	219	multi-exon	FALSE	canonical	3	18	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGGTTGTTATTTTTG	518	False	NA	NA	False	ATTAAA	-14	NA	70275262	70277644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70275362_70276203
ES.33101.3	chr8	+	3502	2	NIC	ENSMUSG00000031861.17	novel	5837	3	NA	NA	51	-2970	intron_retention	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTCTCTTTCTTTCTAC	540	False	NA	NA	False	ATTAAA	-23	NA	70275284	70280781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70276946_70278940
ES.33102.1	chr8	-	1222	1	Antisense	novelGene_ENSMUSG00000031861.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGCGCGAGCAGAGTAG	NA	False	NA	NA	False	NA	NA	NA	70276823	70275601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70275600_70276800
ES.33103.1	chr8	+	2556	2	NNC	ENSMUSG00000031861.17	novel	5837	3	NA	NA	5922	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGACTTGAGTGAAG	3048	False	NA	NA	False	NA	NA	NA	70281155	70283743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70281287_70281318
ES.33104.1	chr8	+	828	5	FSM	ENSMUSG00000031860.18	ENSMUST00000132899.8	823	5	-9	4	-7	-4	multi-exon	FALSE	canonical	0	0	junction_2	15.6744218394172	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCCAGTGTTTTCAAT	2235	False	NA	1	True	ATTAAA	-14	NA	70285302	70324938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70285502_70311729_70311804_70322678_70322833_70323227_70323335_70324644
ES.33104.2	chr8	+	1140	7	NIC	ENSMUSG00000031860.18	novel	1560	8	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	12.3659478676997	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTGTTTTCAATACA	2253	False	NA	4	True	ATTAAA	-17	NA	70285320	70324941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70285502_70311729_70311804_70317473_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ES.33104.3	chr8	+	172	1	Intergenic	novelGene_26996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAATCCAAAAC	4254	False	NA	NA	False	NA	NA	NA	70307036	70307208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70307000_70307200
ES.33105.1	chr8	-	138	1	Intergenic	novelGene_26995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	70303179	70303041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70303000_70303200
ES.33106.1	chr8	-	4219	8	NNC	ENSMUSG00000044006.9	novel	4314	8	NA	NA	-22	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.91662969499982	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTGTGTCAATTGAAAA	NA	False	NA	2	True	ATTAAA	-18	NA	70340359	70333015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70335859_70335949_70336108_70336640_70336750_70336936_70337096_70338037_70338194_70338645_70338919_70339083_70339183_70339937
ES.33106.2	chr8	-	4056	8	FSM	ENSMUSG00000044006.9	ENSMUST00000057831.8	4314	8	259	-1	259	1	multi-exon	FALSE	canonical	0	0	junction_2	1.8516401995451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTGTGTCAATTGAA	NA	False	NA	0	True	ATTAAA	-16	NA	70340078	70333017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70335859_70335949_70336108_70336640_70336750_70336936_70337216_70338037_70338194_70338645_70338919_70339083_70339183_70339937
ES.33106.3	chr8	-	3034	1	Genic_Genomic	ENSMUSG00000044006.9	novel	NA	NA	NA	NA	4286	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTTTGTGTCAATTGAA	NA	False	NA	0	True	ATTAAA	-16	NA	70336051	70333017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_70333000_70336100
ES.33107.1	chr8	+	6195	3	Antisense	novelGene_ENSMUSG00000036199.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTAAAAACATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70346754	70353817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70347225_70347890_70351036_70351237
ES.33108.1	chr8	-	1940	7	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	913	1	intron_retention	FALSE	canonical	3	17	junction_1	2893.66806819457	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCCTCTTTTGTGTAC	NA	False	NA	1	True	AATAAA	-17	NA	70354295	70340436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70347153_70347226_70347891_70347971_70354191
ES.33108.10	chr8	-	2063	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	-648	-16	-648	16	intron_retention	FALSE	canonical	3	6124	junction_2	115.905133622286	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTATCGTGGATCCTTAA	NA	False	NA	-4	True	AATAAA	-33	NA	70355856	70346813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
ES.33108.11	chr8	-	5245	2	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	2943	11	intron_retention	FALSE	non_canonical	0	0	junction_1	0	451	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACTCTATCGTGGATC	1024	False	NA	-9	True	AATAAA	-28	NA	70352265	70346818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70351036_70351237
ES.33108.12	chr8	-	589	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	915	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3126.250019992	452	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGACTCTATCGTGGAT	NA	False	NA	-10	True	AATAAA	-27	NA	70354293	70346819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70353687_70353783_70354191
ES.33108.13	chr8	-	2123	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	-619	10	intron_retention	FALSE	canonical	0	0	junction_3	2953.33171557518	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGACTCTATCGTGGAT	NA	False	NA	-10	True	AATAAA	-27	NA	70355827	70346819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354096
ES.33108.14	chr8	-	881	3	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	952	10	intron_retention	FALSE	canonical	2	193	junction_2	2965.5	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGACTCTATCGTGGAT	NA	False	NA	-10	True	AATAAA	-27	NA	70354256	70346819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347226_70347891_70347971_70353860
ES.33108.15	chr8	-	4703	3	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	2818	10	intron_retention	FALSE	non_canonical	0	0	junction_2	3062	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGACTCTATCGTGGAT	899	False	NA	-10	True	AATAAA	-27	NA	70352390	70346819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347226_70347891_70351036_70351237
ES.33108.17	chr8	-	3623	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	3132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3111.87583099005	451	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	1213	False	NA	-20	True	AATAAA	-17	NA	70352076	70346829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70348633_70351036_70351237
ES.33108.19	chr8	-	480	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	909	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2953.33171557518	452	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATGTTGACTCTAT	NA	False	NA	-28	True	AATAAA	-9	NA	70354299	70346837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354193
ES.33108.2	chr8	-	957	8	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	910	1	multi-exon	FALSE	canonical	1	2	junction_1	2774.69637243135	455	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCCTCTTTTGTGTAC	NA	False	NA	1	True	AATAAA	-17	NA	70354298	70340436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70340673_70341658_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70347153_70347226_70347891_70347971_70354191
ES.33108.20	chr8	-	2121	3	NIC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	-637	-8	intron_retention	FALSE	canonical	3	6124	junction_1	34.5	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATGTTGACTCTAT	NA	False	NA	-28	True	AATAAA	-9	NA	70355845	70346837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70347226_70347891_70347971_70354191
ES.33108.21	chr8	-	2328	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	-606	-8	intron_retention	FALSE	canonical	2	193	junction_3	2862.41750972845	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATGTTGACTCTAT	NA	False	NA	-28	True	AATAAA	-9	NA	70355814	70346837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70353860
ES.33108.3	chr8	-	2007	8	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	919	0	intron_retention	FALSE	canonical	0	0	junction_7	2823.91855406632	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354289	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70346990_70347061_70347153_70347226_70347891_70347971_70354187
ES.33108.4	chr8	-	2145	5	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	898	0	intron_retention	FALSE	canonical	3	20	junction_1	3068.34730555392	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354310	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70342204_70343515_70343625_70347153_70347226_70347891_70347971_70354191
ES.33108.5	chr8	-	6974	3	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	1251	5	NA	NA	910	0	intron_retention	FALSE	canonical	3	6124	junction_1	34.5	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354298	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70347226_70347891_70347971_70354191
ES.33108.6	chr8	-	978	8	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	910	0	multi-exon	FALSE	canonical	2	10	junction_1	2773.96888730842	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354298	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70347153_70347226_70347891_70347971_70354191
ES.33108.7	chr8	-	930	8	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	785	6	NA	NA	919	0	multi-exon	FALSE	canonical	0	0	junction_4	3082.13429894524	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354289	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70346990_70347061_70347153_70347226_70347891_70347971_70354191
ES.33108.8	chr8	-	5979	4	Fusion	ENSMUSG00000036199.10_ENSMUSG00000048967.17	novel	1251	5	NA	NA	941	0	intron_retention	TRUE	canonical	2	10	junction_1	2898.56757726985	455	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	NA	False	NA	0	True	AATAAA	-16	NA	70354267	70340437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_70340673_70341636_70347226_70347891_70347971_70354191
ES.33108.9	chr8	-	509	4	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	910	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2953.33171557518	452	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTATCGTGGATCCTTAA	NA	False	NA	-4	True	AATAAA	-33	NA	70354298	70346813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354187
ES.33109.1	chr8	+	178	1	Intergenic	novelGene_26997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAGAA	7223	False	NA	NA	False	NA	NA	NA	70384037	70384215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70384000_70384200
ES.3311.1	chr10	-	2132	5	FSM	ENSMUSG00000020150.14	ENSMUST00000148615.2	950	5	-54	-1128	-4	702	multi-exon	FALSE	canonical	3	22	junction_2	3.46410161513775	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAACTGCCTTGGAG	9289	False	NA	NA	False	NA	NA	NA	80096806	80093282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ES.3311.2	chr10	-	3352	2	FSM	ENSMUSG00000020150.14	ENSMUST00000144798.2	371	2	-1673	-1308	6	666	multi-exon	FALSE	canonical	3	30	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	9299	False	NA	NA	False	NA	NA	NA	80096796	80093318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80094885_80095010
ES.3311.3	chr10	-	976	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	8	4	8	-4	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGGGTTGGTTGGCAG	9257	False	NA	NA	False	AATAAA	-14	NA	80096838	80093988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ES.3311.4	chr10	-	947	6	FSM	ENSMUSG00000020150.14	ENSMUST00000020359.7	979	6	39	-7	-11	-6	multi-exon	FALSE	canonical	0	0	junction_2	12.2376468326227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGTGGGTTGGTTGGC	9332	False	NA	NA	False	AATAAA	-12	NA	80096763	80093990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80094292_80094773_80094933_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ES.33110.1	chr8	+	132	1	Intergenic	novelGene_26998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAACA	7549	False	NA	NA	False	NA	NA	NA	70384363	70384495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70384400_70384500
ES.33111.1	chr8	+	173	1	Intergenic	novelGene_27000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTGGTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	70421290	70421463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70421300_70421500
ES.33112.1	chr8	+	3379	1	Intergenic	novelGene_27002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4504	False	NA	NA	False	NA	NA	NA	70444295	70447674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70444300_70447700
ES.33113.101	chr8	-	3290	11	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_10	514.898281216786	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427020	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70365572_70365872_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.102	chr8	-	4316	10	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	7733	0	intron_retention	FALSE	canonical	3	148	junction_2	322.976779351086	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70403321	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302
ES.33113.105	chr8	-	3435	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	329.631991772643	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426973	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369120_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.106	chr8	-	3438	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	404.001744701953	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426973	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370291_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.107	chr8	-	3540	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	405.544429161182	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427009	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365872_70366884_70366978_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.108	chr8	-	3726	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	446.760158310087	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448988	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70445638_70445780_70448592
ES.33113.109	chr8	-	4162	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-116	0	intron_retention	FALSE	canonical	3	580	junction_11	188.842581694799	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427037	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.11	chr8	-	5364	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-121	3	intron_retention	FALSE	canonical	3	188	junction_5	298.104008694952	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAACTGTATTGTTCTTT	NA	False	NA	-6	True	AATAAA	-14	NA	70427042	70359722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.111	chr8	-	3480	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	444.099275688068	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426952	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365872_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370291_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.112	chr8	-	3698	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	420.829766423066	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448985	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70373192_70373318_70388428_70388687_70403302_70403405_70448592
ES.33113.115	chr8	-	3300	11	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_10	472.3765447183	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448880	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.116	chr8	-	3270	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	321.490666304187	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427024	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739_70426775_70426969
ES.33113.117	chr8	-	3212	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_10	331.508074269368	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70427029	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70403302_70403405_70426739
ES.33113.12	chr8	-	4252	9	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	18772	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	373.099161584424	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAACTGTATTGTTCTTT	NA	False	NA	-6	True	AATAAA	-14	NA	70370404	70359722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370291
ES.33113.124	chr8	-	3348	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	330.581516254144	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426922	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370710_70388424_70388687_70403302_70403405_70426739
ES.33113.125	chr8	-	3022	9	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-115	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	486.304286815364	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70427036	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70388428_70388687_70426739
ES.33113.128	chr8	-	3544	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-102	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	328.236576267789	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70427023	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370291_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.129	chr8	-	3640	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	420.981538337849	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70448985	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70385189_70385258_70388428_70388687_70403302_70403405_70448592
ES.33113.130	chr8	-	3364	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_10	325.022264194658	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70426981	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.132	chr8	-	3233	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	3	56	junction_10	416.330248760594	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70448901	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70403302_70403405_70448592
ES.33113.133	chr8	-	3505	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	-1	intron_retention	FALSE	canonical	3	580	junction_11	188.096906622602	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70426974	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.134	chr8	-	6150	11	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	102	-1	intron_retention	FALSE	canonical	3	188	junction_4	347.69252220892	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTCACCTGTGTGGAAA	NA	False	NA	-26	True	AATAAA	-15	NA	70448781	70361307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.136	chr8	-	4769	7	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	17072	-2	intron_retention	FALSE	canonical	3	745	junction_5	164.901401516853	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCACCTGTGTGGAA	NA	False	NA	-27	True	AATAAA	-14	NA	70372104	70361308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092
ES.33113.137	chr8	-	3165	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_11	424.928404275745	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCACCTGTGTGGAA	NA	False	NA	-27	True	AATAAA	-14	NA	70389187	70361308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70389110
ES.33113.142	chr8	-	3517	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	395.723948968195	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCACCTGTGTGGAA	NA	False	NA	-27	True	AATAAA	-14	NA	70426974	70361308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70418740_70418845_70426739
ES.33113.146	chr8	-	3200	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-108	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	397.319447114731	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCACCTGTGTGGAA	NA	False	NA	-27	True	AATAAA	-14	NA	70427029	70361308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739_70426778_70426970
ES.33113.147	chr8	-	3286	12	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_9	487.178976734322	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCACCTGTGTGGAA	NA	False	NA	-27	True	AATAAA	-14	NA	70426973	70361308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70365572_70365872_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.15	chr8	-	5013	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-124	3	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_10	325.022264194658	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAACTGTATTGTTCTTT	NA	False	NA	-6	True	AATAAA	-14	NA	70427045	70359722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.151	chr8	-	3098	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-121	386	-121	-385	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGATTCCCATGCC	NA	False	NA	NA	False	ATTAAA	-33	NA	70427042	70361691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.153	chr8	-	3029	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	-395	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGACACAATCTCATGA	NA	False	NA	NA	False	ATTAAA	-23	NA	70426974	70361701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.154	chr8	-	3177	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	50	395	50	-395	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGACACAATCTCATGA	NA	False	NA	NA	False	ATTAAA	-23	NA	70448984	70361701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.155	chr8	-	3001	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-6	-401	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTGATGGACACAATC	NA	False	NA	NA	False	ATTAAA	-17	NA	70448889	70361707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.157	chr8	-	3002	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-39	-406	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	319.205107769983	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCTTTTGATGGACA	NA	False	NA	NA	False	ATTAAA	-12	NA	70448922	70361712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.158	chr8	-	2807	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	140	675	-11	-675	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGAGTCACTGTCATAC	NA	False	NA	NA	False	ATTAAA	-15	NA	70448894	70361981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.159	chr8	-	2738	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-53	678	-53	-677	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCAGAGTCACTGTCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	70426974	70361983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.16	chr8	-	4976	13	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	85	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	333.513492980419	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70448798	70359725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.161	chr8	-	4551	1	Intergenic	novelGene_26999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCATGCAAAGGAATTT	NA	False	NA	NA	False	NA	NA	NA	70399936	70395385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70395400_70399900
ES.33113.162	chr8	-	158	1	Intergenic	novelGene_27001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTGTCTAAGTG	6440	False	NA	NA	False	NA	NA	NA	70433144	70432986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70433000_70433100
ES.33113.17	chr8	-	3528	1	NIC	ENSMUSG00000036180.16	novel	5007	12	NA	NA	25923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70363253	70359725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70359700_70363300
ES.33113.18	chr8	-	4970	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_1	304.837889523085	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70427036	70359725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364414_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.2	chr8	-	5087	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	9	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70448984	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.20	chr8	-	4891	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-103	-56	combination_of_known_splicesites	FALSE	canonical	3	46	junction_11	387.492703210425	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCACTGTGTCATGGGGA	NA	False	NA	-65	True	AATAAA	-15	NA	70427024	70359781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.21	chr8	-	3703	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-115	-225	-115	39	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTCCTTGAGTATTT	NA	False	NA	NA	False	AATAAA	-31	NA	70427036	70361080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.22	chr8	-	3583	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-98	38	combination_of_known_splicesites	FALSE	canonical	3	46	junction_11	318.94171596362	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCCTTGAGTATT	NA	False	NA	NA	False	AATAAA	-30	NA	70427019	70361081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.23	chr8	-	3630	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-115	38	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	379.372884012507	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCCTTGAGTATT	NA	False	NA	NA	False	AATAAA	-30	NA	70427036	70361081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.24	chr8	-	3820	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	27	-225	27	38	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCCTTGAGTATT	NA	False	NA	NA	False	AATAAA	-30	NA	70449007	70361081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.26	chr8	-	3832	14	NNC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-130	37	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	457.940876264443	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAGTCCTTGAGTAT	NA	False	NA	NA	False	AATAAA	-29	NA	70427051	70361082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70418740_70418845_70426739
ES.33113.27	chr8	-	3824	13	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	31	37	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	333.513492980419	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAGTCCTTGAGTAT	NA	False	NA	NA	False	AATAAA	-29	NA	70449003	70361082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.3	chr8	-	4852	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	110	9	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	387.697654202834	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70448773	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.30	chr8	-	3666	12	NIC	ENSMUSG00000036180.16	novel	5007	12	NA	NA	-38	36	combination_of_known_splicesites	FALSE	canonical	3	132	junction_5	414.411401770457	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTAGTCCTTGAGTA	NA	False	NA	NA	False	AATAAA	-28	NA	70448921	70361083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.31	chr8	-	3650	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-67	25	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGCAAGCATTTCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	70426988	70361094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.33	chr8	-	3525	11	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-19	25	combination_of_known_splicesites	FALSE	canonical	3	45	junction_10	415.020734421788	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGCAAGCATTTCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	70448902	70361094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.35	chr8	-	3658	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	319.205107769983	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAG	NA	False	NA	NA	False	TTTAAA	-18	NA	70448985	70361119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.36	chr8	-	3458	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_12	393.331947384564	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAG	NA	False	NA	NA	False	TTTAAA	-18	NA	70427015	70361119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70361568_70361650_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.38	chr8	-	3508	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-121	15	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTCCATCTTTAGAAA	NA	False	NA	-9	True	AATAAA	-32	NA	70427042	70361290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.4	chr8	-	5202	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	10	-1590	10	9	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70449024	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.40	chr8	-	3632	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	-3	-7	-3	6	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTGGAAATCCTCCAT	NA	False	NA	-18	True	AATAAA	-23	NA	70449037	70361299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.41	chr8	-	3561	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-8	5	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGTGGAAATCCTCCA	NA	False	NA	-19	True	AATAAA	-22	NA	70449042	70361300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.42	chr8	-	7392	9	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-52	3	intron_retention	FALSE	canonical	3	580	junction_8	206.486531037741	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTGGAAATCCTC	NA	False	NA	-21	True	AATAAA	-20	NA	70426973	70361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.43	chr8	-	3505	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-139	-3	-139	3	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTGGAAATCCTC	NA	False	NA	-21	True	AATAAA	-20	NA	70427060	70361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.44	chr8	-	3519	13	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	3	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_10	355.115200400596	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTGGAAATCCTC	NA	False	NA	-21	True	AATAAA	-20	NA	70448984	70361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70448592
ES.33113.45	chr8	-	3410	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-119	3	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	313.771143635791	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTGGAAATCCTC	NA	False	NA	-21	True	AATAAA	-20	NA	70427040	70361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.46	chr8	-	3402	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-138	3	combination_of_known_splicesites	FALSE	canonical	3	46	junction_11	318.94171596362	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGTGGAAATCCTC	NA	False	NA	-21	True	AATAAA	-20	NA	70427059	70361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.49	chr8	-	3110	10	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-100	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	348.939345254539	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCTGTGTGGAAATCCT	NA	False	NA	-22	True	AATAAA	-19	NA	70427021	70361303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70388428_70388687_70403302_70403405_70426739
ES.33113.5	chr8	-	5074	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-122	-1589	-122	9	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70427043	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.51	chr8	-	3268	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-102	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	317.006604820783	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACCTGTGTGGAAATCC	NA	False	NA	-23	True	AATAAA	-18	NA	70427023	70361304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426937
ES.33113.52	chr8	-	3632	13	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	333.513492980419	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACCTGTGTGGAAATCC	NA	False	NA	-23	True	AATAAA	-18	NA	70449033	70361304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.56	chr8	-	3507	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_5	414.411401770457	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.58	chr8	-	3385	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-115	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_11	397.311439761416	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427036	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.6	chr8	-	5010	13	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-49	9	combination_of_known_junctions	FALSE	canonical	3	132	junction_6	298.384399726259	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70426970	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.60	chr8	-	3471	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	319.205107769983	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.61	chr8	-	4609	11	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-8	0	intron_retention	FALSE	canonical	3	316	junction_10	262.041618831818	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449042	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.62	chr8	-	3537	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	444.146172431112	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426982	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70418740_70418845_70426739
ES.33113.63	chr8	-	3428	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	73	junction_1	335.967911964554	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448922	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70361568_70361650_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.64	chr8	-	3779	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	446.760158310087	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427042	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70425872_70426159_70426739
ES.33113.65	chr8	-	3591	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	397.275246273632	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448898	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70418740_70418845_70448592
ES.33113.66	chr8	-	3288	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	384.839734567229	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427022	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739_70426788_70426972
ES.33113.67	chr8	-	3444	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-147	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_5	389.014712165224	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427068	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.7	chr8	-	4935	12	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-52	9	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_3	447.960446896231	1426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGTTCTTTAATTTC	NA	False	NA	0	True	AATAAA	-20	NA	70426973	70359716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70365572_70365872_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.71	chr8	-	3423	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	333.966596383531	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426984	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365868_70367164_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.72	chr8	-	3044	11	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	254	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_10	464.416451043673	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448629	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.73	chr8	-	3892	9	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	612	0	intron_retention	FALSE	canonical	3	188	junction_6	303.027226499534	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70388564	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70370505_70370595_70370729_70388428
ES.33113.75	chr8	-	3239	11	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	414.818562747619	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426974	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.77	chr8	-	4560	10	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-19	0	intron_retention	FALSE	canonical	3	316	junction_9	274.66104812664	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448902	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.79	chr8	-	3156	12	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	46	junction_11	459.175401765792	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426974	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70361568_70361650_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
ES.33113.8	chr8	-	5087	12	NIC	ENSMUSG00000036180.16	novel	5007	12	NA	NA	57	7	combination_of_known_splicesites	FALSE	canonical	3	132	junction_5	414.411401770457	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTGTTCTTTAATT	NA	False	NA	-2	True	AATAAA	-18	NA	70448977	70359718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.80	chr8	-	3575	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	391.172096994987	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364047_70364206_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.81	chr8	-	3139	9	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	447.083587682438	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449007	70361305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70388428_70388687_70448592
ES.33113.82	chr8	-	2945	8	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	18708	0	intron_retention	FALSE	canonical	3	745	junction_5	156.960153529227	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70370468	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372
ES.33113.83	chr8	-	3279	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	99	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_11	397.510164119752	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448784	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70448592
ES.33113.84	chr8	-	3171	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_11	330.038790607688	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70389203	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70389110
ES.33113.9	chr8	-	4977	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-104	5	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	313.771143635791	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGTATTGTTCTTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	70427025	70359720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.90	chr8	-	3311	13	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	73	junction_1	407.179424005356	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448881	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70361568_70361650_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.91	chr8	-	4280	4	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	20109	0	intron_retention	FALSE	canonical	3	992	junction_2	98.4107040248502	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70369067	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70367449_70368933
ES.33113.92	chr8	-	3310	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	348.70703325474	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426923	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70365551_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.93	chr8	-	3332	14	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	73	junction_1	305.313923226531	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426974	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70361568_70361650_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.94	chr8	-	3285	12	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_9	403.194701034313	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426976	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.95	chr8	-	3370	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_10	408.16624982965	1423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426974	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
ES.33113.96	chr8	-	3509	14	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	398.819307753131	1444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448780	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70445638_70445780_70448592
ES.33113.97	chr8	-	4787	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-19	0	intron_retention	FALSE	canonical	3	188	junction_5	336.16556821929	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70448902	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ES.33113.98	chr8	-	3422	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	421.067855444807	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70426974	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70362625_70364326_70364520_70364812_70364889_70365572_70365875_70367168_70367449_70368933_70369105_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ES.33113.99	chr8	-	3264	10	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	437.54765525287	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70449022	70361306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70388428_70388687_70403302_70403405_70448592
ES.33114.1	chr8	-	176	1	Intergenic	novelGene_27003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTGTTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	70450474	70450298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70450300_70450500
ES.33115.1	chr8	-	154	1	Intergenic	novelGene_27004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	70459370	70459216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70459200_70459400
ES.33116.1	chr8	+	198	1	Intergenic	novelGene_27005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	70460475	70460673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70460500_70460700
ES.33117.1	chr8	+	4104	4	Antisense	novelGene_ENSMUSG00000031858.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATACACGTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	70476693	70482186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70478543_70478822_70478902_70479322_70479427_70480114
ES.33118.1	chr8	+	201	1	Intergenic	novelGene_27009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTTAAACAAATATGT	NA	False	NA	NA	False	NA	NA	NA	70491537	70491738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70491500_70491700
ES.33119.1	chr8	-	4225	20	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	5852	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.9752271550261	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	70495344	70462920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70463024_70469979_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.11	chr8	-	5188	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	3	-1083	intron_retention	FALSE	canonical	3	216	junction_12	35.9747123796125	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGACAGGTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	70495342	70469855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.12	chr8	-	4161	17	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	-5	-1083	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	88.7848303132354	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGACAGGTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	70495340	70469855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70495041
ES.33119.13	chr8	-	4227	18	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	3	-1101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	81.3618939397746	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	70495342	70469873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485908_70495035
ES.33119.14	chr8	-	4182	18	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	-11	-1101	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	84.1588545713888	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	70495361	70469873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.15	chr8	-	3314	20	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	332	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	95.7466358811028	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGCCTTTTAATCGGG	NA	False	NA	NA	False	CATAAA	-22	NA	70495344	70470883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481651_70481748_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.16	chr8	-	3653	18	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	1	331	intron_retention	FALSE	canonical	3	104	junction_6	54.2903255319655	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCAGCCTTTTAATCGG	NA	False	NA	NA	False	CATAAA	-21	NA	70495344	70470884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.18	chr8	-	3225	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	34	-1328	0	330	multi-exon	FALSE	canonical	3	104	junction_6	54.8951019875382	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCAGCCTTTTAATCG	NA	False	NA	NA	False	CATAAA	-20	NA	70495350	70470885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.19	chr8	-	4596	17	FSM	ENSMUSG00000031858.17	ENSMUST00000212401.2	4269	17	1	-328	1	328	multi-exon	FALSE	canonical	3	224	junction_12	31.9916370908086	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTAGCAGCCTTTTAAT	NA	False	NA	NA	False	CATAAA	-18	NA	70495349	70470887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.2	chr8	-	2896	1	Intergenic	novelGene_27006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTAGCTCTTTGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	70466610	70463714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70463700_70466600
ES.33119.20	chr8	-	3061	19	NNC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	-8	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	74.8159263760476	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGAGTGCTTTTAGTG	NA	False	NA	5	True	NA	NA	NA	70495358	70471205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475468_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.21	chr8	-	3343	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-12	6	intron_retention	FALSE	canonical	3	161	junction_6	43.9600321777151	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTAGAGTGCTTTT	NA	False	NA	1	True	NA	NA	NA	70495362	70471209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.22	chr8	-	2920	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	12	2437	12	6	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTAGAGTGCTTTT	NA	False	NA	1	True	NA	NA	NA	70495372	70471209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.23	chr8	-	2892	18	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	81.3618939397746	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	0	True	NA	NA	NA	70495344	70471210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485908_70495035
ES.33119.24	chr8	-	4296	17	FSM	ENSMUSG00000031858.17	ENSMUST00000212401.2	4269	17	-22	-5	12	5	multi-exon	FALSE	canonical	3	224	junction_12	31.9916370908086	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	0	True	NA	NA	NA	70495372	70471210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.25	chr8	-	2986	20	NNC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	110.676339285153	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	0	True	NA	NA	NA	70495344	70471210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475350_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481541_70481604_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.26	chr8	-	5655	15	NIC	ENSMUSG00000031858.17	novel	2818	19	NA	NA	-1	5	intron_retention	FALSE	canonical	3	18	junction_6	75.5640355552015	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTTAGAGTGCTTT	NA	False	NA	0	True	NA	NA	NA	70495346	70471210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476256_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.28	chr8	-	2887	18	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	81.3618939397746	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATGTTAGAGTGCT	NA	False	NA	-2	True	NA	NA	NA	70495349	70471212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485902_70495037
ES.33119.29	chr8	-	4731	17	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	1	3	intron_retention	FALSE	canonical	3	104	junction_6	53.9156966360447	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATGTTAGAGTGCT	NA	False	NA	-2	True	NA	NA	NA	70495344	70471212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.3	chr8	-	2822	1	Intergenic	novelGene_27007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGGCTAGTCACAAAAT	8814	False	NA	NA	False	AATAAA	-20	NA	70468171	70465349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70465300_70468200
ES.33119.30	chr8	-	2810	19	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	77.5915230192348	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTGATGTTAGAGT	NA	False	NA	-5	True	NA	NA	NA	70495365	70471215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480336_70481282_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.31	chr8	-	2440	16	NNC	ENSMUSG00000031858.17	novel	5323	19	NA	NA	3833	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	112.630487287709	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTGATGTTAGAGT	5185	False	NA	-5	True	NA	NA	NA	70483331	70471215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481651_70481741_70481857_70481886_70483291
ES.33119.32	chr8	-	2986	20	NNC	ENSMUSG00000031858.17	novel	2887	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	99.4942334664416	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495346	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481651_70481748_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.33	chr8	-	4699	16	NIC	ENSMUSG00000031858.17	novel	4269	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	224	junction_11	32.8671399560243	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495360	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.34	chr8	-	2652	17	NIC	ENSMUSG00000031858.17	novel	2887	19	NA	NA	885	0	intron_retention	FALSE	canonical	3	104	junction_6	57.0421992914018	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	2237	False	NA	-6	True	NA	NA	NA	70486279	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260
ES.33119.35	chr8	-	2827	18	NIC	ENSMUSG00000031858.17	novel	2887	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	84.1588545713888	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495349	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.36	chr8	-	3349	18	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	75.6722581758959	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495349	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476237_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.37	chr8	-	5671	16	NIC	ENSMUSG00000031858.17	novel	4269	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	248	junction_12	27.3872638688538	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495347	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.38	chr8	-	2977	19	NNC	ENSMUSG00000031858.17	novel	5323	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	117.324455156535	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495344	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481651_70481748_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485902_70495037
ES.33119.39	chr8	-	3199	19	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	78.1202776350531	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495342	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481541_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.4	chr8	-	3587	1	Genic_Genomic	ENSMUSG00000031858.17	novel	NA	NA	NA	NA	18050	3245	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCACATGGTCTATGT	7871	False	NA	NA	False	TTTAAA	-10	NA	70469114	70465527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_70465500_70469100
ES.33119.40	chr8	-	4239	15	NNC	ENSMUSG00000031858.17	novel	2887	19	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_14	91.5272904545917	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495353	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70481886_70483291_70483387_70484112_70484209_70485828_70485902_70495037
ES.33119.41	chr8	-	3432	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	161	junction_5	45.7103866354987	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495346	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.42	chr8	-	2901	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212845.2	2818	19	-8	-75	-3	0	multi-exon	FALSE	canonical	3	18	junction_6	71.1967583184918	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495353	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476256_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.43	chr8	-	4284	17	NNC	ENSMUSG00000031858.17	novel	4269	17	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_10	77.0975184020212	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495373	70471216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480199_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.44	chr8	-	3841	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	216	junction_12	35.9747123796125	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTCCTGATGTTAGA	NA	False	NA	-7	True	NA	NA	NA	70495357	70471217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.45	chr8	-	3354	18	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	2	junction_6	75.2433192610853	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGTCCTGATGTTAG	NA	False	NA	-8	True	NA	NA	NA	70495352	70471218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475350_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.46	chr8	-	4793	16	NIC	ENSMUSG00000031858.17	novel	2818	19	NA	NA	3	-2	intron_retention	FALSE	canonical	3	18	junction_6	74.3295963186192	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGTCCTGATGTTAG	NA	False	NA	-8	True	NA	NA	NA	70495342	70471218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476256_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480419_70481268_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.47	chr8	-	2899	18	NNC	ENSMUSG00000031858.17	novel	5323	19	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	86.6765454399964	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTGTCCTGATGTTA	NA	False	NA	-9	True	NA	NA	NA	70495370	70471219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70495035
ES.33119.48	chr8	-	3395	17	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-2	-14	intron_retention	FALSE	non_canonical	0	0	junction_6	102.869456108215	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCGACTTGCCATCTG	NA	False	NA	-20	True	NA	NA	NA	70495352	70471230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475402_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485908_70495035
ES.33119.5	chr8	-	3370	1	Genic_Genomic	ENSMUSG00000031858.17	novel	NA	NA	NA	NA	16617	1595	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTGGAGTTCGGGA	6438	False	NA	NA	False	NA	NA	NA	70470547	70467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_70467200_70470500
ES.33119.50	chr8	-	3735	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-8	-14	intron_retention	FALSE	canonical	3	161	junction_6	45.3382519890832	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCGACTTGCCATCTG	NA	False	NA	-20	True	NA	NA	NA	70495358	70471230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.51	chr8	-	3983	17	NNC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	1	-14	intron_retention	FALSE	non_canonical	0	0	junction_16	117.956808170406	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCGACTTGCCATCTG	NA	False	NA	-20	True	NA	NA	NA	70495349	70471230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480419_70481268_70481425_70481651_70481748_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485908_70495035
ES.33119.52	chr8	-	3404	17	NIC	ENSMUSG00000031858.17	novel	2818	19	NA	NA	11	-16	intron_retention	FALSE	canonical	3	18	junction_6	73.1323447166163	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCTCGACTTGCCATC	NA	False	NA	-22	True	NA	NA	NA	70495373	70471232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476256_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.55	chr8	-	2727	18	NIC	ENSMUSG00000031858.17	novel	2818	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	81.7952122523369	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTTTTTTTTTTTTTTT	NA	False	NA	-13	True	NA	NA	NA	70495349	70471291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.56	chr8	-	3310	17	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	161	junction_6	44.3276155460679	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTTTTTTTTTTTTT	NA	False	NA	-14	True	NA	NA	NA	70495346	70471292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.57	chr8	-	193	1	Intergenic	novelGene_27008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAGGGAAAAAAAGC	379	False	NA	NA	False	NA	NA	NA	70488137	70487944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70487900_70488100
ES.33119.58	chr8	-	6995	1	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	-13	-3655	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGATTTTGATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	70495363	70488368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70488400_70495400
ES.33119.6	chr8	-	6529	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	42	-1202	3	1202	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACACTTTTTCGAAGCA	NA	False	NA	NA	False	NA	NA	NA	70495342	70467570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.7	chr8	-	5510	19	NNC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	3	171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.184486562417	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAAGGTTCCCCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	70495342	70468601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70472311_70472387_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.8	chr8	-	5181	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	34	-3284	0	-157	multi-exon	FALSE	canonical	3	104	junction_6	54.8951019875382	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAATGGGTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	70495350	70468929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.33119.9	chr8	-	4267	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	22	1080	-12	-1080	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACAGGTTTTACTGATA	NA	False	NA	NA	False	NA	NA	NA	70495362	70469852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ES.3312.1	chr10	+	1674	12	NIC	ENSMUSG00000069565.13	novel	598	7	NA	NA	-21	192	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	294.159932886351	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACTGGCTTATTTTTT	NA	False	NA	29	True	AATATA	-42	NA	80097298	80123919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80097410_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.11	chr10	+	4731	11	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	1	4	intron_retention	FALSE	canonical	3	848	junction_8	81.107891108079	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTCTGCTTGTGTCT	NA	False	NA	16	True	AATAAA	-25	NA	80100818	80124246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.13	chr10	+	1599	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	7	475	7	40	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGGTTTCTTTTTC	NA	False	NA	53	True	TTTAAA	-23	NA	80100824	80123767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.14	chr10	+	1988	11	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	3	41	junction_6	301.978078674595	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80100825	80124240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.16	chr10	+	1710	11	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	13	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	311.939882028573	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTTTCTACAATG	NA	False	NA	11	True	AATATA	-24	NA	80100830	80123901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119025_80120242_80120384_80121083_80121261_80123372
ES.3312.17	chr10	+	1941	12	NNC	ENSMUSG00000069565.13	novel	1994	12	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	374.416990325797	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80100830	80124240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120300_80121127_80121261_80123372
ES.3312.18	chr10	+	2048	11	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	311.939882028573	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGAGTGCTGTCTGC	NA	False	NA	8	True	AATAAA	-17	NA	80100832	80124238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119028_80120242_80120384_80121083_80121261_80123372
ES.3312.19	chr10	+	2460	11	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	848	junction_8	77.8488278652929	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80100836	80124240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.2	chr10	+	2002	12	NIC	ENSMUSG00000069565.13	novel	598	7	NA	NA	-21	5	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	294.159932886351	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTCTGCTTGTGTCTG	NA	False	NA	17	True	AATAAA	-26	NA	80097298	80124247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80097410_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.21	chr10	+	1733	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	-10	179	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_4	275.204416887484	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTACAATGTATAC	NA	False	NA	16	True	AATATA	-29	NA	80100839	80123906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110714_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.22	chr10	+	1532	11	NNC	ENSMUSG00000069565.13	novel	1994	12	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	387.684614087276	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTTAAAAAACGCC	NA	False	NA	18	True	AATAAA	-20	NA	80100845	80123732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119028_80120242_80120384_80121083_80121261_80123372
ES.3312.24	chr10	+	2113	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	300.877531989676	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80100848	80124240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120449_80121083_80121261_80123372
ES.3312.25	chr10	+	2606	11	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	1	21	intron_retention	FALSE	canonical	3	848	junction_8	79.686949998102	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTTCAGCTTTAATTCAG	NA	False	NA	34	True	AATAAA	-36	NA	80100850	80123748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.26	chr10	+	2280	12	NNC	ENSMUSG00000069565.13	novel	1537	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	388.363785325133	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGAGTGCTGTCTGCT	NA	False	NA	9	True	AATAAA	-18	NA	80100851	80124239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109607_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
ES.3312.27	chr10	+	2035	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	299.615593940354	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGAGTGCTGTCTGC	NA	False	NA	8	True	AATAAA	-17	NA	80100851	80124238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114108_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.28	chr10	+	1459	11	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	3	11	combination_of_known_splicesites	FALSE	canonical	3	41	junction_6	301.978078674595	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAACGCCTTCAGC	NA	False	NA	24	True	AATAAA	-26	NA	80100852	80123738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.30	chr10	+	1758	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	4	195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.018935312017	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGCTTATTTTTTAAT	NA	False	NA	32	True	AATATA	-45	NA	80100853	80123922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110248_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.33	chr10	+	6153	10	NIC	ENSMUSG00000069565.13	novel	1994	12	NA	NA	-13	2	intron_retention	FALSE	canonical	3	126	junction_4	289.731676632785	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAGGGTTTAAAAAAC	NA	False	NA	15	True	AATAAA	-17	NA	80100894	80123729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.34	chr10	+	1483	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	2	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	294.768462154607	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAACGCCTTCAGC	NA	False	NA	24	True	AATAAA	-26	NA	80100909	80123738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113522_80114073_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.36	chr10	+	1501	7	ISM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	13158	4	-2191	-4	3prime_fragment	FALSE	canonical	3	848	junction_4	64.3603138587748	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGAGTGCTGTCTGC	6870	False	NA	8	True	AATAAA	-17	NA	80114065	80124238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.37	chr10	+	3524	5	NIC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	449	0	intron_retention	FALSE	canonical	3	848	junction_2	72.9743105483019	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	321	False	NA	12	True	AATAAA	-21	NA	80116705	80124242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.39	chr10	+	3009	5	ISM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	15993	320	644	195	3prime_fragment	FALSE	canonical	3	848	junction_2	72.9743105483019	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGCTTATTTTTTAAT	516	False	NA	32	True	AATATA	-45	NA	80116900	80123922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.4	chr10	+	1982	13	NNC	ENSMUSG00000069565.13	novel	598	7	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	462.755875165297	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGAGTGCTGTCTGCTT	NA	False	NA	10	True	AATAAA	-19	NA	80097347	80124240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80097410_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80114867_80114901_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.40	chr10	+	832	2	ISM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	19878	513	2085	2	3prime_fragment	FALSE	canonical	3	947	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAGGGTTTAAAAAAC	3482	False	NA	15	True	AATAAA	-17	NA	80120785	80123729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80121261_80123372
ES.3312.5	chr10	+	1972	12	NNC	ENSMUSG00000069565.13	novel	1100	5	NA	NA	347	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.989173358359	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGAGTGCTGTCTGC	NA	False	NA	8	True	AATAAA	-17	NA	80097666	80124238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80097757_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.6	chr10	+	2070	12	NNC	ENSMUSG00000069565.13	novel	1100	5	NA	NA	362	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	372.351207178926	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTCTGCTTGTGTCT	NA	False	NA	16	True	AATAAA	-25	NA	80097681	80124246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80097859_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.7	chr10	+	2281	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	-196	-4	-196	4	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTCTGCTTGTGTCT	NA	False	NA	16	True	AATAAA	-25	NA	80100621	80124246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.3312.8	chr10	+	1790	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	-29	320	-29	195	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGCTTATTTTTTAAT	NA	False	NA	32	True	AATATA	-45	NA	80100788	80123922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ES.33120.1	chr8	+	2378	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	-36	339	-36	-339	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCACTGAGGCTCATTG	2121	False	NA	64	True	NA	NA	NA	70495426	70524658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.10	chr8	+	2231	13	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	214	390	-7	-390	intron_retention	FALSE	canonical	3	384	junction_4	49.9997222214506	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCAGTTCCTGC	2371	False	NA	13	True	ATTAAA	-18	NA	70495676	70524607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171
ES.33120.11	chr8	+	2067	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-7	-388	at_least_one_novel_splicesite	TRUE	canonical	2	16	junction_6	138.293145465855	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTCCAGTTCCTGCTG	2371	False	NA	15	True	ATTAAA	-20	NA	70495676	70524609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513197_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.12	chr8	+	4754	13	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-7	-390	intron_retention	FALSE	canonical	3	402	junction_5	48.6095555306659	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCAGTTCCTGC	2371	False	NA	13	True	ATTAAA	-18	NA	70495676	70524607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.13	chr8	+	2221	13	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-4	-388	intron_retention	FALSE	canonical	3	15	junction_7	140.577380826362	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTCCAGTTCCTGCTG	2374	False	NA	15	True	ATTAAA	-20	NA	70495679	70524609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517603_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70524302_70524455
ES.33120.15	chr8	+	3345	9	NNC	ENSMUSG00000011306.8	novel	2963	8	NA	NA	-4	970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	155.925813690357	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAACTTGTGGAAGAA	2389	False	NA	NA	False	NA	NA	NA	70495694	70520531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70519610_70520186
ES.33120.16	chr8	+	2077	2	ISM	ENSMUSG00000011306.8	ENSMUST00000213035.2	2239	4	-4	7770	-4	-7770	5prime_fragment	FALSE	canonical	3	508	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAACAA	2389	False	NA	NA	False	NA	NA	NA	70495694	70503199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70495731_70501158
ES.33120.17	chr8	+	3994	5	NNC	ENSMUSG00000011306.8	novel	2239	4	NA	NA	-4	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.940439746642	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACTTGTGGAAGAAAGAA	2389	False	NA	NA	False	NA	NA	NA	70495694	70520535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70511006_70518820
ES.33120.18	chr8	+	1655	12	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-3	-375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	220.672038918234	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGTTGCCAGAAACCT	2390	False	NA	28	True	ATTAAA	-33	NA	70495695	70524622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513095_70513310_70522101_70522209_70522645_70522824_70522980_70523088_70524171_70524302_70524455
ES.33120.19	chr8	+	2045	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-3	-391	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	134.331040353177	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCATTCCAGTTCCTG	2390	False	NA	12	True	ATTAAA	-17	NA	70495695	70524606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511943_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.2	chr8	+	3409	9	NNC	ENSMUSG00000011306.8	novel	2963	8	NA	NA	-27	341	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	149.854929848837	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTAGAAGAATGTCCGT	2130	False	NA	NA	False	NA	NA	NA	70495435	70519902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495528_70495670_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ES.33120.20	chr8	+	2437	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	182.373178760916	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGCTCCTCTGGTCTT	2390	False	NA	NA	False	GATAAA	-13	NA	70495695	70524996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511943_70512056_70512402_70512504_70513185_70513310_70517486_70517851_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.22	chr8	+	2198	12	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	1	-384	intron_retention	FALSE	canonical	2	2	junction_4	149.23042252927	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTTCCTGCTGTTGC	2394	False	NA	19	True	ATTAAA	-24	NA	70495699	70524613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70524302_70524455
ES.33120.23	chr8	+	2160	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	71	-392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	186.203616995612	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	2464	False	NA	11	True	ATTAAA	-16	NA	70495769	70524605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495905_70501158_70501335_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.24	chr8	+	2595	12	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	5568	-392	intron_retention	FALSE	canonical	3	384	junction_3	54.0813589735849	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	122	False	NA	11	True	ATTAAA	-16	NA	70501266	70524605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.25	chr8	+	1810	11	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	9542	-397	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	209.748063161499	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTCCAGCATTCCAG	4096	False	NA	6	True	ATTAAA	-11	NA	70505240	70524600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70505342_70509035_70509255_70512402_70512504_70513095_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.26	chr8	+	1915	11	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	13237	-390	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	160.194413136039	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCAGTTCCTGC	7791	False	NA	13	True	ATTAAA	-18	NA	70508935	70524607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70509255_70511866_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.27	chr8	+	5005	17	Fusion	ENSMUSG00000011306.8_ENSMUSG00000036151.16	novel	2681	14	NA	NA	-12365	5	intron_retention	TRUE	canonical	0	0	junction_8	262.404476667225	330	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCACCTAAGTGTTTCG	1650	False	NA	NA	False	AATAAA	-20	NA	70513208	70532707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455_70527032_70527981_70528080_70528253_70528393_70528650_70528734_70530039_70530165_70530530_70530633_70530723_70530820_70530959_70531053_70531454_70531575_70532265
ES.33120.28	chr8	+	5796	6	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	17511	-394	intron_retention	FALSE	non_canonical	0	0	junction_4	213.793732368374	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCCAGCATTCCAGTTC	1651	False	NA	9	True	ATTAAA	-14	NA	70513209	70524603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70513310_70517486_70522209_70522645_70522824_70522980_70523088_70523760_70524302_70524455
ES.33120.29	chr8	+	279	1	ISM	ENSMUSG00000011306.8	ENSMUST00000211808.2	2963	8	23597	2	23582	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGGAAAGGCTGTCTGT	5205	False	NA	NA	False	CATAAA	-17	NA	70519280	70519559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70519300_70519600
ES.33120.3	chr8	+	2706	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	-26	1	-26	-1	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGCTCCTCTGGTCTT	2131	False	NA	NA	False	GATAAA	-13	NA	70495436	70524996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.30	chr8	+	3896	4	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	24025	-391	intron_retention	FALSE	canonical	3	523	junction_2	33.2365260920372	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCATTCCAGTTCCTG	5648	False	NA	12	True	ATTAAA	-17	NA	70519723	70524606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70522824_70522980_70523088_70523763_70524302_70524455
ES.33120.31	chr8	+	3512	3	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	24812	-384	intron_retention	FALSE	canonical	3	507	junction_1	43.5	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTTCCTGCTGTTGC	6435	False	NA	19	True	ATTAAA	-24	NA	70520510	70524613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70522209_70522645_70524302_70524455
ES.33120.32	chr8	+	3159	6	NIC	ENSMUSG00000036151.16	novel	1446	10	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_1	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACATCACCACCTAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	70525589	70532701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70525740_70526927_70528734_70530039_70530165_70530530_70531053_70531454_70531575_70532265
ES.33120.4	chr8	+	4177	8	FSM	ENSMUSG00000011306.8	ENSMUST00000211808.2	2963	8	-240	-974	-19	974	multi-exon	FALSE	canonical	3	384	junction_4	42.1644012728021	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACTTGTGGAAGAAAGAA	2138	False	NA	NA	False	NA	NA	NA	70495443	70520535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ES.33120.5	chr8	+	2200	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-19	-383	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	139.368058109819	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCCTGCTGTTGCC	2138	False	NA	20	True	ATTAAA	-25	NA	70495443	70524614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517603_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.6	chr8	+	2161	15	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-18	-390	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	175.856345013857	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCAGTTCCTGC	2139	False	NA	13	True	ATTAAA	-18	NA	70495444	70524607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495528_70495670_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522106_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33120.7	chr8	+	3542	8	FSM	ENSMUSG00000011306.8	ENSMUST00000211808.2	2963	8	-238	-341	-17	341	multi-exon	FALSE	canonical	3	384	junction_4	42.1644012728021	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTAGAAGAATGTCCGT	2140	False	NA	NA	False	NA	NA	NA	70495445	70519902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ES.33120.8	chr8	+	5226	12	NIC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	4	-390	intron_retention	FALSE	canonical	3	402	junction_5	45.0524029133238	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCATTCCAGTTCCTGC	2161	False	NA	13	True	ATTAAA	-18	NA	70495466	70524607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70524302_70524455
ES.33120.9	chr8	+	2165	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	-7	-392	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	140.533135346001	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAGCATTCCAGTTCCT	2371	False	NA	11	True	ATTAAA	-16	NA	70495676	70524605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513095_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ES.33121.1	chr8	-	175	1	Intergenic	novelGene_27010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAGAGAAAGAGAGA	8740	False	NA	NA	False	NA	NA	NA	70497998	70497823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70497800_70498000
ES.33122.1	chr8	-	2683	1	Antisense	novelGene_ENSMUSG00000011306.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3590	False	NA	NA	False	NA	NA	NA	70506978	70504295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70504300_70507000
ES.33123.1	chr8	-	176	1	Intergenic	novelGene_27011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	9210	False	NA	NA	False	NA	NA	NA	70513964	70513788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70513800_70514000
ES.33124.1	chr8	-	3393	1	Antisense	novelGene_ENSMUSG00000011306.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGGGGGACAAGATAGC	7110	False	NA	NA	False	NA	NA	NA	70520853	70517460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70517500_70520900
ES.33124.2	chr8	-	1742	6	Antisense	novelGene_ENSMUSG00000011306.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAGGGGGACAAGATAGC	3083	False	NA	NA	False	NA	NA	NA	70524880	70517460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70517847_70522099_70522207_70522643_70522823_70522979_70523086_70523761_70524299_70524453
ES.33125.1	chr8	+	3237	5	FSM	ENSMUSG00000007594.11	ENSMUST00000007738.11	3648	5	49	362	9	-362	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGCCAGTCCCTGTC	1138	False	NA	NA	False	AATAAA	-28	NA	70536155	70543150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70536214_70537069_70537191_70537431_70537795_70539457_70539782_70540779
ES.33125.2	chr8	+	3258	5	NNC	ENSMUSG00000007594.11	novel	3648	5	NA	NA	50	-362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.78535710713571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGCCAGTCCCTGTC	1179	False	NA	NA	False	AATAAA	-28	NA	70536196	70543150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70536214_70537069_70537191_70537369_70537795_70539457_70539782_70540779
ES.33125.3	chr8	+	3525	3	NIC	ENSMUSG00000007594.11	novel	3648	5	NA	NA	162	-371	intron_retention	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAAACAAGGCTGCCA	1938	False	NA	NA	False	AATAAA	-19	NA	70536955	70543141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70537795_70539457_70539782_70540779
ES.33126.1	chr8	-	4041	6	ISM	ENSMUSG00000002341.9	ENSMUST00000002412.9	7195	15	18359	0	18359	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGCCTGTGGCCCCCT	NA	False	NA	-1	True	AATAAA	-16	NA	70555164	70545734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70549101_70550098_70550282_70550699_70550845_70552882_70552966_70554550_70554710_70555059
ES.33127.1	chr8	-	434	1	Intergenic	novelGene_27012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATCTGCTGGAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	70575479	70575045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70575000_70575500
ES.33128.1	chr8	+	160	1	Intergenic	novelGene_27013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAACTAAGCCGG	648	False	NA	NA	False	NA	NA	NA	70580507	70580667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70580500_70580700
ES.33129.1	chr8	+	1347	1	Genic_Genomic	ENSMUSG00000071078.7	novel	NA	NA	NA	NA	-488	-1548	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGCACACGCCTTTA	3635	False	NA	NA	False	NA	NA	NA	70583494	70584841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_70583500_70584800
ES.33129.10	chr8	+	1505	3	FSM	ENSMUSG00000071078.7	ENSMUST00000212851.2	1507	3	-8	10	6	0	multi-exon	FALSE	canonical	3	67	junction_2	269.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	453	False	NA	9	True	NA	NA	NA	70583988	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70584250_70584567_70584659_70585236
ES.33129.13	chr8	+	1595	4	ISM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	7	1	7	-1	intron_retention	FALSE	canonical	3	525	junction_3	33.8657480190367	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAACCAAACACCCC	468	False	NA	8	True	NA	NA	NA	70584003	70586388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236
ES.33129.15	chr8	+	1209	4	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_3	279.964680312039	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAACCAAACACCCC	479	False	NA	8	True	NA	NA	NA	70584014	70586388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584250_70584567_70584659_70585061_70585305_70585748
ES.33129.17	chr8	+	1025	5	NNC	ENSMUSG00000071078.7	novel	1078	4	NA	NA	264	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	274.982158512148	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	725	False	NA	9	True	NA	NA	NA	70584260	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584378_70584567_70584659_70585061_70585168_70585236_70585301_70585742
ES.33129.18	chr8	+	1052	4	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	427	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	261.687260336116	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	888	False	NA	9	True	NA	NA	NA	70584423	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584659_70585061_70585168_70585236_70585301_70585742
ES.33129.19	chr8	+	1022	4	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	455	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	261.687260336116	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	916	False	NA	9	True	NA	NA	NA	70584451	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584659_70585061_70585168_70585236_70585305_70585748
ES.33129.2	chr8	+	1205	5	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	248.840310239318	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCAAACACCCCATT	419	False	NA	11	True	NA	NA	NA	70583954	70586391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585301_70585742
ES.33129.3	chr8	+	1710	3	ISM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	-38	0	-24	0	intron_retention	FALSE	canonical	3	581	junction_2	12.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	423	False	NA	9	True	NA	NA	NA	70583958	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70584250_70584567_70584659_70585061
ES.33129.4	chr8	+	1655	3	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_2	303	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	437	False	NA	9	True	NA	NA	NA	70583972	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584250_70584567_70585305_70585748
ES.33129.6	chr8	+	2088	2	ISM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	1	9	1	0	intron_retention	FALSE	canonical	3	606	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	448	False	NA	9	True	NA	NA	NA	70583983	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70584250_70584567
ES.33129.8	chr8	+	1067	4	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	271.261661295674	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	449	False	NA	9	True	NA	NA	NA	70583984	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584250_70584567_70584659_70585236_70585301_70585742
ES.33129.9	chr8	+	1171	5	NNC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	248.840310239318	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	450	False	NA	9	True	NA	NA	NA	70583985	70586389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585306_70585748
ES.3313.1	chr10	-	144	1	Intergenic	novelGene_2571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7995	False	NA	NA	False	NA	NA	NA	80098100	80097956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80098000_80098100
ES.33130.1	chr8	-	3722	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-101	-12	-101	0	multi-exon	TRUE	canonical	3	42	junction_5	11.7626261948597	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGTTTTGCTTGAGT	9444	False	NA	0	True	ATTAAA	-34	NA	70591905	70583443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.2	chr8	-	3874	8	NIC	ENSMUSG00000036120.11	novel	3609	9	NA	NA	-92	-1	intron_retention	FALSE	canonical	3	52	junction_5	10.222025039999	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTAATGTGTAATGAGT	9453	False	NA	-13	True	ATTAAA	-21	NA	70591896	70583456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.3	chr8	-	3780	8	NIC	ENSMUSG00000036120.11	novel	3609	9	NA	NA	-51	-6	intron_retention	FALSE	canonical	3	42	junction_4	12.4638252063927	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACTTTAATGTGTAA	9494	False	NA	-18	True	ATTAAA	-16	NA	70591855	70583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.4	chr8	-	2342	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-122	1389	-122	1071	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCCGCCTTTTTTGTTT	9423	False	NA	NA	False	NA	NA	NA	70591926	70584844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.5	chr8	-	1617	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-161	2153	-161	307	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTTTCTTTTAAAT	9384	False	NA	NA	False	ACTAAA	-43	NA	70591965	70585608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.6	chr8	-	1611	8	NIC	ENSMUSG00000036120.11	novel	3609	9	NA	NA	-49	287	intron_retention	FALSE	canonical	3	42	junction_4	12.4638252063927	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAATCAATAGCACCTT	9496	False	NA	NA	False	ACTAAA	-23	NA	70591853	70585628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.7	chr8	-	1267	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-84	2426	-84	34	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAGCCGCTTCTCACC	9461	False	NA	36	True	GGGGCT	-7	NA	70591888	70585881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.8	chr8	-	1257	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	-138	2	-80	-2	multi-exon	FALSE	canonical	2	7	junction_5	20.7590341779188	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTCAGGGTGCCTCC	9465	False	NA	0	True	AATAAA	-16	NA	70591884	70585917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ES.33130.9	chr8	-	3170	4	NIC	ENSMUSG00000036120.11	novel	3609	9	NA	NA	-80	-4	intron_retention	FALSE	canonical	3	61	junction_3	2.05480466765633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTCAGGGTGCCT	9465	False	NA	-2	True	AATAAA	-14	NA	70591884	70585919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70587329_70587688_70588941_70590678_70590874_70591570
ES.33131.1	chr8	+	2278	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	-92	-1376	-92	1313	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTGTGGTGCC	8521	False	NA	26	True	ATTAAA	-36	NA	70592056	70601282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ES.33131.10	chr8	+	1665	13	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	71.7291878448996	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8835	False	NA	4	True	NA	NA	NA	70592370	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.11	chr8	+	1589	10	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	10	-2	intron_retention	FALSE	canonical	1	1	junction_3	79.7014490938171	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCTCCTCAAAGA	8835	False	NA	2	True	NA	NA	NA	70592370	70620135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.12	chr8	+	1362	9	NNC	ENSMUSG00000079033.11	novel	1342	9	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	85.2613628790908	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8535	False	NA	4	True	NA	NA	NA	70605373	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619316_70619468_70619557_70619715
ES.33131.13	chr8	+	1353	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	-38	-3	-38	3	multi-exon	FALSE	canonical	3	113	junction_6	45.467021015237	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	8551	False	NA	8	True	NA	NA	NA	70605389	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.14	chr8	+	1379	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	-38	1	-38	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8551	False	NA	4	True	NA	NA	NA	70605389	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ES.33131.15	chr8	+	1287	9	NNC	ENSMUSG00000079033.11	novel	1312	9	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.5085054890926	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	8563	False	NA	8	True	NA	NA	NA	70605401	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619295_70619468_70619557_70619715
ES.33131.16	chr8	+	1294	9	NNC	ENSMUSG00000079033.11	novel	1312	9	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	84.7915642915025	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	8572	False	NA	8	True	NA	NA	NA	70605410	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605457_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.17	chr8	+	1355	9	NNC	ENSMUSG00000079033.11	novel	1312	9	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	80.2200099725748	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	8572	False	NA	8	True	NA	NA	NA	70605410	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619240_70619349_70619468_70619557_70619715
ES.33131.18	chr8	+	1446	8	NIC	ENSMUSG00000079033.11	novel	1223	8	NA	NA	-15	0	intron_retention	FALSE	canonical	3	113	junction_6	47.786515047743	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8574	False	NA	4	True	NA	NA	NA	70605412	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619557_70619715
ES.33131.19	chr8	+	1318	9	NNC	ENSMUSG00000079033.11	novel	1342	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	86.4533833924387	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8574	False	NA	4	True	NA	NA	NA	70605412	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605457_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ES.33131.2	chr8	+	1076	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	-295	-25	-87	11	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTCTGTCACTGGAATG	8526	False	NA	36	True	AATAAA	-36	NA	70592061	70598210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
ES.33131.20	chr8	+	1205	9	NNC	ENSMUSG00000079033.11	novel	1342	9	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	87.7040477971228	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8605	False	NA	4	True	NA	NA	NA	70605443	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619835
ES.33131.21	chr8	+	4460	2	Intergenic	novelGene_27014	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTAGGAGTGGTAGTTGT	NA	False	NA	NA	False	AATAAA	-5	NA	70608978	70613485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70609414_70609460
ES.33131.22	chr8	+	1632	10	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5797	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	98.8253228906663	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTCCTCAAAGATCTC	519	False	NA	6	True	NA	NA	NA	70611227	70620139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611545_70612035_70612105_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.23	chr8	+	1550	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5842	3	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	79.2668554630496	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	564	False	NA	8	True	NA	NA	NA	70611272	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ES.33131.24	chr8	+	1482	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5878	1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	77.3801492632316	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTCCTCAAAGATCTC	600	False	NA	6	True	NA	NA	NA	70611308	70620139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.25	chr8	+	1297	7	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5895	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.356996455443	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	617	False	NA	8	True	NA	NA	NA	70611325	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619712
ES.33131.26	chr8	+	1786	10	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5907	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.7850776839657	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	629	False	NA	4	True	NA	NA	NA	70611337	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611767_70611991_70612105_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ES.33131.27	chr8	+	1173	8	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	6090	-10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	102.204077557541	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCCACACCCAATCTC	812	False	NA	-6	True	NA	NA	NA	70611520	70620127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619468_70619557_70619715
ES.33131.28	chr8	+	985	1	Genic_Genomic	ENSMUSG00000079033.11	novel	NA	NA	NA	NA	13726	3	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCTCAAAGATCTCTT	1003	False	NA	8	True	NA	NA	NA	70619156	70620141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_70619200_70620100
ES.33131.3	chr8	+	1894	12	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	-269	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	72.4595070731871	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8556	False	NA	4	True	NA	NA	NA	70592091	70620137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ES.33131.4	chr8	+	3220	5	ISM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	163	-1374	-45	1311	intron_retention	FALSE	canonical	3	111	junction_4	33.5745439283991	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAACAGTGGTCTGTGGTG	8776	False	NA	24	True	ATTAAA	-34	NA	70592311	70601280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460
ES.33131.5	chr8	+	1879	1	NIC	ENSMUSG00000002345.19	novel	810	6	NA	NA	-5	-3955	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTCTAGCCTGGGCTG	8816	False	NA	NA	False	NA	NA	NA	70592351	70594230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70592400_70594200
ES.33131.6	chr8	+	607	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	205	-2	-3	2	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTCTCTTTCCATGCT	8818	False	NA	19	True	AATACA	-13	NA	70592353	70599908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ES.33131.7	chr8	+	2120	7	NNC	ENSMUSG00000002345.19	novel	691	7	NA	NA	0	1309	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	81.5953770476953	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAACAGTGGTCTGTGG	8827	False	NA	22	True	ATTAAA	-32	NA	70592362	70601278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70598781_70598934_70599739
ES.33131.8	chr8	+	2208	7	NNC	ENSMUSG00000002345.19	novel	691	7	NA	NA	1	1307	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	81.8229796573065	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGAAACAGTGGTCTGT	8828	False	NA	20	True	ATTAAA	-30	NA	70592363	70601276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70598690_70598934_70599739
ES.33131.9	chr8	+	2332	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	217	-1739	3	1676	multi-exon	FALSE	canonical	3	86	junction_5	44.6183818621877	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGACTT	8830	False	NA	NA	False	NA	NA	NA	70592365	70601645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ES.33132.1	chr8	-	4194	3	Antisense	novelGene_ENSMUSG00000079033.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATCTCCAGCCCAGGCT	3	True	NA	NA	False	TTTAAA	-11	NA	70599732	70594259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70594625_70595121_70596220_70597001
ES.33133.1	chr8	-	2894	1	Intergenic	novelGene_27015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACACACAGCCGGGCGTG	5006	False	NA	NA	False	NA	NA	NA	70613785	70610891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70610900_70613800
ES.33134.1	chr8	-	170	1	Intergenic	novelGene_27016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGGATGTTCCTAA	1380	False	NA	NA	False	NA	NA	NA	70617411	70617241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70617200_70617400
ES.33135.1	chr8	+	2107	11	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	81.7435012707432	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTGCCAGTGTGGTC	5857	False	NA	18	True	AATAAA	-28	NA	70625045	70635511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631673_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.10	chr8	+	3810	10	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	91	junction_1	41.3040517547374	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGGTGCCAGTGTGGT	5872	False	NA	17	True	AATAAA	-27	NA	70625060	70635510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633974_70634079_70634177_70634532
ES.33135.11	chr8	+	1523	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	4	553	-1	265	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCCTGGGCCATGAT	5873	False	NA	NA	False	CATAAA	-12	NA	70625061	70634947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.12	chr8	+	4035	11	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_1	15.5935884260166	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5880	False	NA	7	True	AATAAA	-17	NA	70625068	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.13	chr8	+	4506	11	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	0	-4	intron_retention	FALSE	canonical	3	91	junction_1	40.4568906368248	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACATGGTTACTGTATT	5880	False	NA	NA	False	AATAAA	-26	NA	70625068	70636313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.14	chr8	+	2357	10	NIC	ENSMUSG00000002342.18	novel	2109	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	91	junction_1	40.7406734006177	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5881	False	NA	7	True	AATAAA	-17	NA	70625069	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633974_70634079_70634177_70634532
ES.33135.15	chr8	+	2452	10	ISM	ENSMUSG00000002342.18	ENSMUST00000147656.8	2109	11	7	6	1	2	intron_retention	FALSE	canonical	0	0	junction_8	73.4278851730571	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTGGTCTGGCCCAG	5881	False	NA	26	True	AATAAA	-36	NA	70625069	70635519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633519_70633798_70633974_70634079
ES.33135.16	chr8	+	3357	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	15	2	1	-2	intron_retention	FALSE	canonical	3	91	junction_1	40.2120628667568	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGATCCTTATCTT	5881	False	NA	NA	False	AATAAA	-42	NA	70625069	70636329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079
ES.33135.17	chr8	+	3874	9	NIC	ENSMUSG00000002342.18	novel	2109	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	91	junction_1	43.1914343359884	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGCTGCCTTACCATG	5881	False	NA	4	True	AATAAA	-14	NA	70625069	70635497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633974_70634079_70634177_70634532
ES.33135.18	chr8	+	2158	12	NNC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.3870057504395	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5883	False	NA	7	True	AATAAA	-17	NA	70625071	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631657_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.19	chr8	+	2032	5	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	4	0	intron_retention	FALSE	canonical	2	16	junction_1	86.4016782244419	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5884	False	NA	7	True	AATAAA	-17	NA	70625072	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70633188_70633250_70633355_70633500_70633585_70633974_70634079
ES.33135.2	chr8	+	3610	10	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	-5	2	intron_retention	FALSE	canonical	3	25	junction_1	62.4371288715969	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	5861	False	NA	9	True	AATAAA	-19	NA	70625049	70635502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.20	chr8	+	2279	12	NNC	ENSMUSG00000002342.18	novel	2093	11	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.62714218901	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATGGTGCCAGTGTGGT	5905	False	NA	17	True	AATAAA	-27	NA	70625093	70635510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70625212_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.21	chr8	+	3699	10	NNC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_5	69.7073246589705	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	7763	False	NA	7	True	AATAAA	-17	NA	70626951	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633277_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.22	chr8	+	2150	11	NNC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	65.4431814630065	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	7763	False	NA	7	True	AATAAA	-17	NA	70626951	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633698_70633798_70633974_70634079_70634177_70634532
ES.33135.23	chr8	+	2982	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1897	1	-1	-1	3prime_fragment	FALSE	canonical	3	184	junction_1	15.5935884260166	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGATCCTTATCTTT	7763	False	NA	NA	False	AATAAA	-43	NA	70626951	70636330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.24	chr8	+	3003	11	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	66.3256360693209	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACATGGTTACTGTATT	7763	False	NA	NA	False	AATAAA	-26	NA	70626951	70636313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70627057_70629456_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.25	chr8	+	3778	9	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	184	junction_1	15.6983279364396	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	7763	False	NA	7	True	AATAAA	-17	NA	70626951	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.26	chr8	+	2351	9	NIC	ENSMUSG00000002342.18	novel	2093	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	184	junction_1	14.6714007511212	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	7763	False	NA	7	True	AATAAA	-17	NA	70626951	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70627057_70629494_70629576_70629890_70630259_70631516_70631669_70633188_70633250_70633355_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.27	chr8	+	1965	9	ISM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	4832	2	0	-2	3prime_fragment	FALSE	canonical	3	195	junction_3	12.9174058928254	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTGCCTTACCATGG	NA	False	NA	5	True	AATAAA	-15	NA	70629889	70635498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.28	chr8	+	1713	7	ISM	ENSMUSG00000002342.18	ENSMUST00000149105.2	2093	11	4562	17	132	0	3prime_fragment	FALSE	canonical	3	195	junction_1	12.11060141639	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	NA	False	NA	7	True	AATAAA	-17	NA	70631514	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.29	chr8	+	196	1	Intergenic	novelGene_27017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGTGAGTGCTATAT	NA	False	NA	36	True	NA	NA	NA	70632066	70632262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70632100_70632300
ES.33135.3	chr8	+	3819	8	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	25	junction_1	68.2169408608167	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGCCAGTGTGGTCT	5861	False	NA	19	True	AATAAA	-29	NA	70625049	70635512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70629494_70629576_70629890_70630259_70631516_70633250_70633355_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.30	chr8	+	179	1	Intergenic	novelGene_27018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAATTGGA	NA	False	NA	NA	False	NA	NA	NA	70632522	70632701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70632500_70632700
ES.33135.4	chr8	+	2185	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	2	831	-1	0	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5868	False	NA	7	True	AATAAA	-17	NA	70625056	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.5	chr8	+	1983	10	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	83.9613373692886	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5868	False	NA	7	True	AATAAA	-17	NA	70625056	70635500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70629494_70629576_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.7	chr8	+	3793	10	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	2	intron_retention	FALSE	canonical	3	91	junction_1	42.2637222949212	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	5868	False	NA	9	True	AATAAA	-19	NA	70625056	70635502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.8	chr8	+	3707	11	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	-1	2	intron_retention	FALSE	canonical	3	91	junction_1	40.4568906368248	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTACCATGGTGCC	5868	False	NA	9	True	AATAAA	-19	NA	70625056	70635502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33135.9	chr8	+	2116	11	NIC	ENSMUSG00000002342.18	novel	2080	11	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	66.3256360693209	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTGCCTTACCATGG	5869	False	NA	5	True	AATAAA	-15	NA	70625057	70635498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70625091_70629456_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ES.33136.1	chr8	-	4695	8	NIC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	-41	1	intron_retention	FALSE	non_canonical	0	0	junction_1	11.2431384971149	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTCTTACTTCTTCAA	NA	False	NA	NA	False	AATAAA	-14	NA	70664996	70636988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70637876_70637941_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.11	chr8	-	3571	8	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	22	0	intron_retention	TRUE	non_canonical	0	0	junction_1	10.9897911810954	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70664933	70636989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637878_70637941_70639427_70640949_70641102_70641482_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.13	chr8	-	3108	9	NNC	ENSMUSG00000002346.17	novel	3196	8	NA	NA	-15	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.6389614154766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCTTCTTACTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	70664921	70636991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637872_70637923_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.15	chr8	-	2990	10	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.6929551764398	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCTTCTTACTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	70664923	70636991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637878_70637941_70639146_70639253_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.16	chr8	-	3109	9	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.6389614154766	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCTTCTTACTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	70664943	70636991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637869_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.17	chr8	-	1273	2	NNC	ENSMUSG00000002346.17	novel	3657	7	NA	NA	26581	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCCTGCTTCTTACTTC	8804	False	NA	NA	False	AATAAA	-9	NA	70638325	70636993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637865_70637923
ES.33136.18	chr8	-	3182	10	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	-23	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.4743280617618	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTTTAAATATCTC	NA	False	NA	NA	False	NA	NA	NA	70664929	70637007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637874_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646474_70646573_70646773_70646887_70664877
ES.33136.19	chr8	-	4428	4	NIC	ENSMUSG00000002346.17	novel	1804	6	NA	NA	20	2	intron_retention	FALSE	canonical	3	20	junction_1	6.0184900284226	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGACAGTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	70664935	70640363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70641102_70641482_70642739_70644510_70646887_70664877
ES.33136.2	chr8	-	3142	9	FSM	ENSMUSG00000002346.17	ENSMUST00000063788.8	3081	9	-60	-1	-11	1	multi-exon	TRUE	non_canonical	0	0	junction_1	10.6389614154766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTCTTACTTCTTCAA	NA	False	NA	NA	False	AATAAA	-14	NA	70664966	70636988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70637876_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.3	chr8	-	3380	9	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	-242	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.6389614154766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70665197	70636989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637884_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.4	chr8	-	5086	7	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	-23	0	intron_retention	TRUE	non_canonical	0	0	junction_1	11.6392535079455	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70664929	70636989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637874_70637941_70641102_70641482_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ES.33136.6	chr8	-	3178	10	NNC	ENSMUSG00000002346.17	novel	3081	9	NA	NA	23	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.0114591550745	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70664932	70636989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70637872_70637941_70639427_70640949_70641102_70641482_70641600_70642055_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70660603_70660674_70664877
ES.33137.1	chr8	+	174	1	Intergenic	novelGene_27019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAATCTTAAAAAAA	2514	False	NA	NA	False	NA	NA	NA	70678717	70678891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70678700_70678900
ES.33138.1	chr8	+	3633	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4157853461422	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1061	False	NA	26	True	AATAAA	-17	NA	70686844	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.10	chr8	+	5232	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	39.9777716015065	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCCCTGTGTCTTA	1080	False	NA	NA	False	NA	NA	NA	70686863	70716942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.11	chr8	+	4506	10	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_1	49.6028673006354	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1082	False	NA	26	True	AATAAA	-17	NA	70686865	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70709869_70711592_70711655_70712332_70713968_70715520
ES.33138.13	chr8	+	4618	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	-9	0	-9	0	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1083	False	NA	26	True	AATAAA	-17	NA	70686866	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.14	chr8	+	5580	10	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	37.7038492320556	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1083	False	NA	26	True	AATAAA	-17	NA	70686866	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.15	chr8	+	4762	9	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	-9	-5	-9	5	intron_retention	FALSE	canonical	3	99	junction_6	8.78564169540279	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTGTGAGTCAATTCT	1083	False	NA	NA	False	NA	NA	NA	70686866	70713697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332
ES.33138.16	chr8	+	3819	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.2999756335225	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1083	False	NA	26	True	AATAAA	-17	NA	70686866	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70687047_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.17	chr8	+	3924	6	FSM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-406	-1	-9	1	multi-exon	FALSE	canonical	3	101	junction_1	8.51821577561874	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATTATGTACACAGCGT	1083	False	NA	NA	False	AATAAA	-19	NA	70686866	70707414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228
ES.33138.18	chr8	+	6818	9	ISM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	-9	2	-9	-2	intron_retention	FALSE	canonical	3	99	junction_6	8.78564169540279	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1083	False	NA	24	True	AATAAA	-15	NA	70686866	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332
ES.33138.19	chr8	+	5616	10	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_1	37.813708403301	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1083	False	NA	25	True	AATAAA	-16	NA	70686866	70715754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.2	chr8	+	4534	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-31	1	intron_retention	FALSE	canonical	2	7	junction_1	32.25569332794	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTGTGCTGCCG	1061	False	NA	27	True	AATAAA	-18	NA	70686844	70715756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70687043_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.20	chr8	+	5159	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-8	0	intron_retention	FALSE	canonical	2	7	junction_1	33.7977809922486	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1084	False	NA	26	True	AATAAA	-17	NA	70686867	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70687043_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70713968_70715520
ES.33138.21	chr8	+	4037	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	31.9027447716798	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1096	False	NA	25	True	AATAAA	-16	NA	70686879	70715754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.22	chr8	+	4194	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	30.3369507121661	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1392	False	NA	26	True	AATAAA	-17	NA	70687175	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713766_70713880_70713968_70715520
ES.33138.23	chr8	+	7015	9	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-78	-1	intron_retention	FALSE	canonical	2	7	junction_2	47.5143070558753	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1405	False	NA	25	True	AATAAA	-16	NA	70687188	70715754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70713968_70715520
ES.33138.24	chr8	+	2290	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	-47	10187	-41	1673	5prime_fragment	FALSE	canonical	3	101	junction_1	11.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGCCCTG	1442	False	NA	NA	False	NA	NA	NA	70687225	70697226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70687303_70689317_70689445_70695140
ES.33138.25	chr8	+	3523	11	NNC	ENSMUSG00000036054.16	novel	3874	11	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.6221027668742	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1442	False	NA	24	True	AATAAA	-15	NA	70687225	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715526
ES.33138.26	chr8	+	4932	10	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-36	0	intron_retention	FALSE	canonical	3	99	junction_6	10.3601801786134	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1447	False	NA	26	True	AATAAA	-17	NA	70687230	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70712470_70713118_70713968_70715520
ES.33138.27	chr8	+	6231	9	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-36	0	intron_retention	FALSE	canonical	3	99	junction_6	10.7812047100498	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1447	False	NA	26	True	AATAAA	-17	NA	70687230	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332_70713968_70715520
ES.33138.28	chr8	+	5029	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	32.6164791285602	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1451	False	NA	26	True	AATAAA	-17	NA	70687234	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70714100
ES.33138.29	chr8	+	3853	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.3999327310509	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1451	False	NA	26	True	AATAAA	-17	NA	70687234	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706585_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.3	chr8	+	1307	1	Genic_Genomic	ENSMUSG00000036054.16	novel	NA	NA	NA	NA	-26	-7145	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAAGATTGGGTCTGCA	1066	False	NA	NA	False	NA	NA	NA	70686849	70688156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_70686800_70688200
ES.33138.30	chr8	+	5509	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-30	-4	intron_retention	FALSE	canonical	3	9	junction_8	33.1887028972209	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCCCTGTGTCTTA	1453	False	NA	NA	False	NA	NA	NA	70687236	70716942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713968_70715520
ES.33138.31	chr8	+	3741	10	FSM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	365	-7	-26	7	multi-exon	FALSE	canonical	3	99	junction_6	8.36660026534075	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGAGTCAATTCTCC	1457	False	NA	NA	False	NA	NA	NA	70687240	70713699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118
ES.33138.32	chr8	+	2800	8	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	39.3798871278738	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1457	False	NA	26	True	AATAAA	-17	NA	70687240	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70709869_70715520
ES.33138.33	chr8	+	6202	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	1408	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAAACTGGT	1457	False	NA	NA	False	NA	NA	NA	70687240	70718354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.34	chr8	+	5571	9	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	0	intron_retention	FALSE	canonical	3	99	junction_6	10.7812047100498	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1457	False	NA	26	True	AATAAA	-17	NA	70687240	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70713968_70715520
ES.33138.36	chr8	+	11048	7	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	1408	intron_retention	FALSE	canonical	2	6	junction_3	41.2744876810522	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAAACTGGT	1457	False	NA	NA	False	NA	NA	NA	70687240	70718354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701078_70701197_70704263_70704752_70706228_70706341_70709779
ES.33138.37	chr8	+	5795	10	FSM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	365	-2061	-26	-2	multi-exon	FALSE	canonical	3	99	junction_6	8.36660026534075	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1457	False	NA	24	True	AATAAA	-15	NA	70687240	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118
ES.33138.38	chr8	+	4017	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.1208567459881	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1457	False	NA	26	True	AATAAA	-17	NA	70687240	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713766_70713880_70713968_70715520
ES.33138.39	chr8	+	4309	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-26	0	intron_retention	FALSE	canonical	2	7	junction_2	41.7394515797922	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1457	False	NA	26	True	AATAAA	-17	NA	70687240	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.4	chr8	+	3962	14	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.8066427574654	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1067	False	NA	26	True	AATAAA	-17	NA	70686850	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70687032_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.40	chr8	+	5571	10	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-25	0	intron_retention	FALSE	canonical	3	99	junction_6	10.3601801786134	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1458	False	NA	26	True	AATAAA	-17	NA	70687241	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.41	chr8	+	4275	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_9	35.7765286186349	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1458	False	NA	26	True	AATAAA	-17	NA	70687241	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70712470_70713118_70713240_70713885_70713968_70715520
ES.33138.42	chr8	+	3551	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.4308265388161	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1458	False	NA	26	True	AATAAA	-17	NA	70687241	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712466_70713880_70713968_70715520
ES.33138.43	chr8	+	4400	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-23	728	intron_retention	FALSE	canonical	1	2	junction_10	43.5555966553094	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTTTCTGTGCCTGGG	1460	False	NA	NA	False	AATATA	-17	NA	70687243	70714420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713968_70714100
ES.33138.44	chr8	+	6838	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	370	-2599	-21	1408	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAAAACTGGT	1462	False	NA	NA	False	NA	NA	NA	70687245	70718354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.45	chr8	+	4321	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-21	0	intron_retention	FALSE	canonical	3	9	junction_8	33.3970058538187	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1462	False	NA	26	True	AATAAA	-17	NA	70687245	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70713240_70713880_70713968_70715520
ES.33138.46	chr8	+	4949	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-19	-2	intron_retention	FALSE	canonical	2	7	junction_2	43.4931029014946	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1464	False	NA	24	True	AATAAA	-15	NA	70687247	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689395_70689471_70689587_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70713968_70715520
ES.33138.47	chr8	+	4307	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	9	junction_8	33.1887028972209	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1466	False	NA	24	True	AATAAA	-15	NA	70687249	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713968_70715520
ES.33138.48	chr8	+	3999	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_7	34.1852029271958	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1467	False	NA	26	True	AATAAA	-17	NA	70687250	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70709869_70710103_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.49	chr8	+	3775	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-14	727	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	46.5471684304093	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTTTCTGTGCCTGG	1469	False	NA	NA	False	AATATA	-16	NA	70687252	70714419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713665_70713766_70713880_70713968_70714100
ES.33138.5	chr8	+	3988	12	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_10	11.7353742277127	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1072	False	NA	26	True	AATAAA	-17	NA	70686855	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.50	chr8	+	4903	10	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_7	37.6566686173648	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1469	False	NA	26	True	AATAAA	-17	NA	70687252	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711570_70711655_70712332_70713968_70715520
ES.33138.51	chr8	+	3643	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.1852029271958	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1469	False	NA	26	True	AATAAA	-17	NA	70687252	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713292_70713880_70713968_70715520
ES.33138.52	chr8	+	3690	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	34.1852029271958	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1470	False	NA	26	True	AATAAA	-17	NA	70687253	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713340_70713880_70713968_70715520
ES.33138.53	chr8	+	4238	11	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	90	junction_9	12.2653984851696	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1471	False	NA	26	True	AATAAA	-17	NA	70687254	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70713240_70713880_70713968_70715520
ES.33138.54	chr8	+	6880	8	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	99	junction_6	11.3892179588541	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1474	False	NA	24	True	AATAAA	-15	NA	70687257	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70713968_70715520
ES.33138.55	chr8	+	2997	8	ISM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	382	2047	-9	-408	5prime_fragment	FALSE	canonical	3	99	junction_6	9.36559051604786	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGGTGTGTGTGAC	1474	False	NA	NA	False	NA	NA	NA	70687257	70711645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592
ES.33138.56	chr8	+	3190	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.322004603461	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1474	False	NA	26	True	AATAAA	-17	NA	70687257	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70709869_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.57	chr8	+	4469	11	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_6	35.8167558553256	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1476	False	NA	26	True	AATAAA	-17	NA	70687259	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706585_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.6	chr8	+	3876	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	31.1430391723237	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1075	False	NA	24	True	AATAAA	-15	NA	70686858	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70687043_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.60	chr8	+	4098	10	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_5	37.1842260463582	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCCGGCTCCTGTGCTG	1489	False	NA	24	True	AATAAA	-15	NA	70687272	70715753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.62	chr8	+	4748	9	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	39.3605132080363	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1490	False	NA	26	True	AATAAA	-17	NA	70687273	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70709779_70710265_70711592_70711655_70712332_70713968_70715520
ES.33138.63	chr8	+	3815	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.4157853461422	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1490	False	NA	26	True	AATAAA	-17	NA	70687273	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687548_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.64	chr8	+	3334	13	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.9548301973069	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGCTCCTGTGCTGC	1490	False	NA	25	True	AATAAA	-16	NA	70687273	70715754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70709869_70710103_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.65	chr8	+	3685	4	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	7947	-404	-1014	404	3prime_fragment	FALSE	canonical	3	113	junction_1	4.18993502999218	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATCTGGAATTTTTAAT	9436	False	NA	NA	False	NA	NA	NA	70695219	70707817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70696707_70701075_70701197_70704263_70704752_70706228
ES.33138.66	chr8	+	5096	4	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	7972	-1840	-989	-1667	3prime_fragment	FALSE	canonical	3	113	junction_1	4.18993502999218	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTAGTTCTTAGTGC	9461	False	NA	NA	False	AAAAAG	-31	NA	70695244	70709253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70696707_70701075_70701197_70704263_70704752_70706228
ES.33138.67	chr8	+	6012	3	ISM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	8172	-1479	-789	1479	intron_retention	FALSE	canonical	3	113	junction_1	3.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGCTGCTGTGAGCA	9661	False	NA	NA	False	NA	NA	NA	70695444	70708892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70696707_70701075_70701197_70704263
ES.33138.68	chr8	+	7178	6	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-685	1	intron_retention	FALSE	canonical	3	99	junction_4	8.35224520712844	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTGTGCTGCCG	9765	False	NA	27	True	AATAAA	-18	NA	70695548	70715756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332
ES.33138.69	chr8	+	6358	8	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-618	0	intron_retention	FALSE	canonical	0	0	junction_7	40.0209129004794	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	9832	False	NA	26	True	AATAAA	-17	NA	70695615	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332_70712470_70713118_70713998_70714100
ES.33138.7	chr8	+	3897	11	FSM	ENSMUSG00000036054.16	ENSMUST00000093458.11	3874	11	-23	0	-16	0	multi-exon	FALSE	canonical	1	3	junction_10	33.7467035427166	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1076	False	NA	26	True	AATAAA	-17	NA	70686859	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
ES.33138.70	chr8	+	3876	9	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-226	1	intron_retention	FALSE	canonical	3	90	junction_7	12.4943737338051	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTGTGCTGCCG	NA	False	NA	27	True	AATAAA	-18	NA	70696007	70715756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.71	chr8	+	2687	9	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	272	0	intron_retention	FALSE	canonical	2	6	junction_1	37.2455953771718	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	NA	False	NA	26	True	AATAAA	-17	NA	70696505	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70696707_70701078_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ES.33138.73	chr8	+	3829	2	NNC	ENSMUSG00000036054.16	novel	470	3	NA	NA	-608	0	intron_retention	FALSE	canonical	1	2	junction_1	0	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	7738	False	NA	26	True	AATAAA	-17	NA	70711793	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70713968_70714100
ES.33138.8	chr8	+	3871	11	NIC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	35.4695644179626	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1077	False	NA	26	True	AATAAA	-17	NA	70686860	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70713880_70713968_70715520
ES.33138.9	chr8	+	3528	11	NNC	ENSMUSG00000036054.16	novel	3874	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4423810995859	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1079	False	NA	26	True	AATAAA	-17	NA	70686862	70715755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70686937_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
ES.33139.1	chr8	-	2081	8	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	30.2722341967901	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCTCATTTTTCTCA	5011	False	NA	-3	True	NA	NA	NA	70686773	70672824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686595
ES.33139.10	chr8	-	3074	6	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	2719	-17	intron_retention	FALSE	canonical	3	72	junction_3	12.3838604643302	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAT	7727	False	NA	-43	True	NA	NA	NA	70684057	70672864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70678124_70682177_70682261_70683929
ES.33139.11	chr8	-	1412	5	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	-13	3260	-13	-246	5prime_fragment	FALSE	canonical	3	75	junction_4	11.8822346383161	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTAGGGTCGTGGTTCT	4655	False	NA	NA	False	AATGAA	-15	NA	70687129	70676081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ES.33139.12	chr8	-	3379	4	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	17	-1136	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.1508980207828	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCACTGGAGAGCTGG	4702	False	NA	NA	False	AAAAAG	-8	NA	70687082	70679103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70679562_70679789_70682261_70683929_70684057_70686759
ES.33139.14	chr8	-	236	1	Intergenic	novelGene_27020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGCAGAGGATATATG	NA	False	NA	NA	False	NA	NA	NA	70679784	70679548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70679500_70679800
ES.33139.2	chr8	-	1622	7	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	40.2036482589992	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCTCATTTTTCTCA	4684	False	NA	-3	True	NA	NA	NA	70687100	70672824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70682177_70682261_70683929_70684057_70686807
ES.33139.3	chr8	-	2282	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	-29	10	-29	-10	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTAAAGCTTCTCATT	4639	False	NA	-10	True	NA	NA	NA	70687145	70672831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ES.33139.4	chr8	-	2945	7	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	19	9	intron_retention	FALSE	canonical	2	6	junction_6	32.668367302671	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTAATTTTAAAGCT	5027	False	NA	-17	True	NA	NA	NA	70686757	70672838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70673528_70674755_70674894_70675167_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686595
ES.33139.5	chr8	-	2297	8	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2256077664699	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGAGTGTAATTTTAAA	4689	False	NA	-20	True	NA	NA	NA	70687095	70672841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676118_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ES.33139.6	chr8	-	4622	5	NIC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	0	6	intron_retention	FALSE	canonical	3	75	junction_4	11.8822346383161	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGAGTGTAATTTTAAA	4685	False	NA	-20	True	NA	NA	NA	70687099	70672841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ES.33139.7	chr8	-	2586	7	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	2719	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.8074066192176	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAT	7727	False	NA	-43	True	NA	NA	NA	70684057	70672864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70673528_70674755_70674894_70675167_70675300_70675471_70676340_70677549_70678124_70682177_70682261_70683929
ES.33139.9	chr8	-	1921	8	NNC	ENSMUSG00000002343.12	novel	2263	8	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.2389041187121	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAT	4687	False	NA	-43	True	NA	NA	NA	70687097	70672864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70687039
ES.3314.1	chr10	-	175	1	Intergenic	novelGene_2572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	9144	False	NA	NA	False	NA	NA	NA	80108844	80108669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80108700_80108800
ES.33140.1	chr8	-	3682	1	Antisense	novelGene_ENSMUSG00000036054.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAGGCTGGAGGGTTA	NA	False	NA	NA	False	NA	NA	NA	70705754	70702072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70702100_70705800
ES.33141.1	chr8	-	3568	1	Antisense	novelGene_ENSMUSG00000036054.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGTTTTTATGTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	70712785	70709217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70709200_70712800
ES.33141.2	chr8	-	3110	3	Antisense	novelGene_ENSMUSG00000036054.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGGTGCCTGAGTAGC	NA	False	NA	NA	False	AATAAA	-20	NA	70726806	70709375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70709980_70713465_70715821_70726655
ES.33141.3	chr8	-	1039	2	Antisense	novelGene_ENSMUSG00000036054.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCTGGTGTCCCTGAC	NA	False	NA	NA	False	AAGAAA	-17	NA	70726875	70715001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_70715821_70726655
ES.33142.1	chr8	+	3307	11	Fusion	ENSMUSG00000003573.16_ENSMUSG00000036054.16	novel	2445	10	NA	NA	4552	0	intron_retention	FALSE	canonical	1	1	junction_1	67.1866058080031	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	6613	False	NA	NA	False	AATAAA	-17	NA	70730793	70747003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_70731213_70735197_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.10	chr8	+	5677	5	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	13	544	intron_retention	FALSE	canonical	3	165	junction_4	34.1686991265398	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTATTAAGCATTCT	NA	False	NA	7	True	ATTAAA	-16	NA	70735661	70744932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70742152_70742701_70742824_70743656
ES.33142.11	chr8	+	2087	4	FSM	ENSMUSG00000003573.16	ENSMUST00000155711.2	678	4	-22	-1387	13	1159	multi-exon	FALSE	canonical	3	219	junction_1	13.6707311029399	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTATTTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	70735661	70740339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580
ES.33142.12	chr8	+	3346	10	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-17	2	intron_retention	FALSE	canonical	1	3	junction_4	69.768576888078	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGATCTGGCTCCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	70735666	70747005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70739638_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.13	chr8	+	3781	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	24	11	-11	-3	intron_retention	FALSE	canonical	3	150	junction_8	37.4814537471534	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735672	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
ES.33142.14	chr8	+	2948	10	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_2	77.6670640587513	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735678	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737575_70737740_70737883_70737966_70738043_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.16	chr8	+	851	6	NNC	ENSMUSG00000003573.16	novel	880	5	NA	NA	-4	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.54188654413	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCTTTGGTGTAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	70735679	70739190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737575_70737740_70737883_70737966_70738043_70738201_70738580_70738713_70738945
ES.33142.17	chr8	+	1833	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	206	-1159	-1	1159	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTATTTTCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	70735682	70740339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
ES.33142.18	chr8	+	4387	6	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	5	-3	intron_retention	FALSE	canonical	3	165	junction_5	30.6894118549053	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735688	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738713_70742043_70742152_70742701_70742824_70743656
ES.33142.19	chr8	+	678	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	214	-12	7	12	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCTTTGGTGTAAATGT	NA	False	NA	NA	False	ATTAAA	-21	NA	70735690	70739192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
ES.33142.2	chr8	+	2507	10	Fusion	ENSMUSG00000003573.16_ENSMUSG00000036054.16	novel	2323	9	NA	NA	-4502	-4	intron_retention	FALSE	canonical	0	0	junction_1	68.9069868700277	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAAGTGAGATCTGGC	6794	False	NA	NA	False	AATAAA	-13	NA	70730974	70746999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_70731151_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.20	chr8	+	2412	10	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	7	-4	intron_retention	FALSE	canonical	1	1	junction_9	70.1634775381531	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAAGTGAGATCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	70735690	70746999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744275_70745624
ES.33142.21	chr8	+	1495	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	43	907	8	-15	multi-exon	FALSE	canonical	3	142	junction_9	38.9171326009065	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAAGAGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	70735691	70746104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.22	chr8	+	5876	8	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	8	-3	intron_retention	FALSE	canonical	3	142	junction_7	42.0781585691607	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735691	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
ES.33142.23	chr8	+	5721	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	9	-3	intron_retention	FALSE	canonical	3	142	junction_8	41.2187381539028	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735692	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.24	chr8	+	2682	10	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	34	-4	intron_retention	FALSE	canonical	0	0	junction_2	85.223163836606	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAAGTGAGATCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	70735717	70746999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737575_70737740_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
ES.33142.25	chr8	+	2489	11	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	45	-3	intron_retention	FALSE	canonical	1	1	junction_2	80.701920671072	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735728	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737575_70737711_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.3	chr8	+	2539	11	Fusion	ENSMUSG00000003573.16_ENSMUSG00000036054.16	novel	2323	9	NA	NA	-4496	-22	intron_retention	FALSE	canonical	0	0	junction_1	81.7767693174535	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAAATGAACAAGTA	6800	False	NA	NA	False	NA	NA	NA	70730980	70746981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_70731164_70737359_70737403_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.4	chr8	+	2834	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	142	junction_8	34.6335729459148	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735628	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.5	chr8	+	2292	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-16	-4	intron_retention	FALSE	canonical	1	2	junction_2	60.6206183983634	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAAGTGAGATCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	70735632	70746999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.6	chr8	+	2462	10	NNC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	71.0692585171172	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	70735642	70747003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743637_70743814_70743967_70744079_70744166_70744254_70745624
ES.33142.7	chr8	+	2591	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_8	39.3660704160321	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	70735648	70747003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
ES.33142.8	chr8	+	3952	8	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	7	-3	intron_retention	FALSE	canonical	3	150	junction_7	36.8621259089952	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	70735655	70747000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166
ES.33142.9	chr8	+	2142	9	ISM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	7	1667	7	-775	5prime_fragment	FALSE	canonical	3	150	junction_8	37.4814537471534	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70735655	70745344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
ES.33143.1	chr8	-	2160	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	-12	-11	-12	11	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCTACATACAAAGCAT	9919	False	NA	-13	True	NA	NA	NA	70755151	70745504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ES.33143.2	chr8	-	2114	12	NIC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	-6	134	intron_retention	FALSE	canonical	3	264	junction_3	17.5461610785676	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGACTTGAGAATGGGG	9925	False	NA	-6	True	AGTAAA	-18	NA	70755145	70746101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70750648_70750730_70750817_70753628_70753753_70754972
ES.33143.3	chr8	-	1559	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	-8	586	-8	134	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGACTTGAGAATGGGG	9923	False	NA	-6	True	AGTAAA	-18	NA	70755147	70746101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ES.33143.4	chr8	-	1389	12	NIC	ENSMUSG00000057788.14	novel	2137	13	NA	NA	1	134	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	83.7461729728786	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGACTTGAGAATGGGG	9969	False	NA	-6	True	AGTAAA	-18	NA	70755101	70746101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70754972
ES.33143.6	chr8	-	1607	13	FSM	ENSMUSG00000057788.14	ENSMUST00000144890.8	2163	13	-19	575	-8	134	multi-exon	FALSE	canonical	1	3	junction_4	78.7772439646543	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGACTTGAGAATGGGG	9949	False	NA	-6	True	AGTAAA	-18	NA	70755121	70746101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747486_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ES.33143.9	chr8	-	1316	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	48	773	-7	-53	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACCGACGCTTCAAG	9979	False	NA	NA	False	NA	NA	NA	70755091	70746288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ES.33144.1	chr8	+	2046	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	21	1	intron_retention	FALSE	canonical	3	1283	junction_8	36.3180395946698	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATACCCACCAGGCG	473	False	NA	30	True	AATAAA	-19	NA	70755188	70765644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.10	chr8	+	6414	4	NNC	ENSMUSG00000055681.15	novel	2753	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_1	657.376773412495	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCTGCCTGATACCCAC	701	False	NA	24	True	AATAAA	-13	NA	70755416	70765638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755621_70757283_70763142_70764277_70764347_70765355
ES.33144.11	chr8	+	1082	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	427.578452840334	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	705	False	NA	26	True	AATAAA	-15	NA	70755420	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765473
ES.33144.12	chr8	+	908	8	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	473.983724856214	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	708	False	NA	26	True	AATAAA	-15	NA	70755423	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.13	chr8	+	4040	7	NIC	ENSMUSG00000055681.15	novel	2753	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1283	junction_6	37.5917396363734	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCTGCCTGATACCCAC	709	False	NA	24	True	AATAAA	-13	NA	70755424	70765638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.14	chr8	+	4051	7	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	6	-1	intron_retention	FALSE	canonical	3	1283	junction_6	41.1892650523842	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCTGCCTGATACCCACC	713	False	NA	25	True	AATAAA	-14	NA	70755428	70765639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.16	chr8	+	1763	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_2	417.52285366592	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	714	False	NA	26	True	AATAAA	-15	NA	70755429	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70758072_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.17	chr8	+	1526	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	-3	intron_retention	FALSE	canonical	3	1246	junction_3	52.0672641877793	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCTCTGCCTGATACCCA	714	False	NA	23	True	AATAAA	-12	NA	70755429	70765637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.18	chr8	+	1032	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	414.054329351018	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	714	False	NA	26	True	AATAAA	-15	NA	70755429	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759154_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.19	chr8	+	3230	7	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	1283	junction_6	37.4596078759805	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	714	False	NA	26	True	AATAAA	-15	NA	70755429	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70759302_70760599_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.2	chr8	+	2114	8	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	31	1	intron_retention	FALSE	canonical	3	1342	junction_4	24.2705835218232	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATACCCACCAGGCG	483	False	NA	30	True	AATAAA	-19	NA	70755198	70765644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ES.33144.20	chr8	+	1049	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	428.149621937743	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCTGCCTGATACCCAC	714	False	NA	24	True	AATAAA	-13	NA	70755429	70765638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759135_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.22	chr8	+	1008	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_9	417.263572444191	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	714	False	NA	26	True	AATAAA	-15	NA	70755429	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765538
ES.33144.23	chr8	+	3663	6	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	7	-5	intron_retention	FALSE	canonical	3	1352	junction_3	21.6277599394852	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGCTCTGCCTGATACC	714	False	NA	21	True	AATAAA	-10	NA	70755429	70765635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70757347_70758284_70761227_70762985_70763142_70764277_70764347_70765355
ES.33144.24	chr8	+	2768	8	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	474.330118403301	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	723	False	NA	26	True	AATAAA	-15	NA	70755438	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755621_70757283_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.25	chr8	+	6265	5	NIC	ENSMUSG00000055681.15	novel	837	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1342	junction_2	25.5831976109321	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTCTGCCTGATACCCACC	725	False	NA	25	True	AATAAA	-14	NA	70755440	70765639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70759302_70760599_70760654_70761144_70763142_70764277_70764347_70765355
ES.33144.26	chr8	+	1743	7	FSM	ENSMUSG00000055681.15	ENSMUST00000128003.8	837	7	-906	0	-906	0	multi-exon	FALSE	canonical	3	1246	junction_1	49.614066105849	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	978	False	NA	26	True	AATAAA	-15	NA	70757441	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ES.33144.27	chr8	+	1678	5	NIC	ENSMUSG00000055681.15	novel	2753	8	NA	NA	-1178	-2	intron_retention	FALSE	canonical	3	1283	junction_4	45.6124982872019	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCTGCCTGATACCCAC	1717	False	NA	24	True	AATAAA	-13	NA	70759978	70765638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.3	chr8	+	1355	9	ISM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	39	-16	39	13	intron_retention	FALSE	canonical	3	1246	junction_3	46.5025200930014	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGCGCTCACTCTGACA	491	False	NA	42	True	AATAAA	-31	NA	70755206	70765656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ES.33144.4	chr8	+	1276	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	40	-16	40	13	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGCGCTCACTCTGACA	492	False	NA	42	True	AATAAA	-31	NA	70755207	70765656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.5	chr8	+	3529	6	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	41	0	intron_retention	FALSE	canonical	3	1345	junction_2	22.0308874083637	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	493	False	NA	26	True	AATAAA	-15	NA	70755208	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70755583_70757283_70759302_70760599_70761227_70762985_70763142_70764277_70764347_70765355
ES.33144.6	chr8	+	2419	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	63	-3	intron_retention	FALSE	canonical	0	0	junction_2	559.203225056491	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCTCTGCCTGATACCCA	515	False	NA	23	True	AATAAA	-12	NA	70755230	70765637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70757649_70758072_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.7	chr8	+	1413	10	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	425.017065743059	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	545	False	NA	26	True	AATAAA	-15	NA	70755260	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70758284_70758386_70758942_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.8	chr8	+	2904	8	FSM	ENSMUSG00000055681.15	ENSMUST00000134822.8	2753	8	-154	3	97	0	multi-exon	FALSE	canonical	3	1283	junction_7	34.9203174588744	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	549	False	NA	26	True	AATAAA	-15	NA	70755264	70765640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70755583_70757283_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33144.9	chr8	+	1551	11	NNC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	99	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	618.73228459488	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTGATACCCACCAG	551	False	NA	27	True	AATAAA	-16	NA	70755266	70765641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70755583_70757283_70757347_70757938_70758082_70758284_70758386_70758942_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ES.33145.1	chr8	+	2743	8	FSM	ENSMUSG00000087408.11	ENSMUST00000165819.9	2728	8	-17	2	-17	-2	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGCGCAGGTGTGCCT	2341	False	NA	NA	False	AAAAAG	-36	NA	70768407	70784240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
ES.33145.2	chr8	+	3134	8	NNC	ENSMUSG00000087408.11	novel	2728	8	NA	NA	6	424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9.37212540963242	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAAACCCCAAACACC	2364	False	NA	NA	False	NA	NA	NA	70768430	70784666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782905_70783338
ES.33145.3	chr8	+	3129	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	11	-429	11	424	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAAACCCCAAACACC	2381	False	NA	NA	False	NA	NA	NA	70768447	70784666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
ES.33145.4	chr8	+	3508	7	ISM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	14	-389	14	384	intron_retention	FALSE	canonical	3	19	junction_4	3.09569593683445	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAACCAAAAA	2384	False	NA	NA	False	NA	NA	NA	70768450	70784626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187
ES.33145.5	chr8	+	1902	5	NNC	ENSMUSG00000087408.11	novel	2728	8	NA	NA	30	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.4774797134678	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAAGTTCCATTGCG	2400	False	NA	NA	False	AAAAAG	-19	NA	70768466	70784223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70768508_70775762_70775900_70776010_70776121_70782187_70782927_70783348
ES.33145.6	chr8	+	3101	7	ISM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	30	2	30	-2	intron_retention	FALSE	canonical	3	19	junction_4	3.09569593683445	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCGTTGGCGCAGGTG	2400	False	NA	NA	False	AAAAAG	-31	NA	70768466	70784235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187
ES.33146.1	chr8	-	174	1	Intergenic	novelGene_27021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGTTGGGCCA	4528	False	NA	NA	False	NA	NA	NA	70778980	70778806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70778800_70779000
ES.33147.1	chr8	-	4811	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	-161	-32	-161	32	multi-exon	TRUE	canonical	0	0	junction_1	146.934304983882	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTCCCGGGTGGTCAAC	NA	False	NA	3	True	AAAACA	-43	NA	70806089	70784142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.10	chr8	-	4041	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-72	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.404999372875	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTTTTGCGTGGGGC	NA	False	NA	-28	True	AATAAA	-15	NA	70806000	70784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70784513_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.11	chr8	-	5246	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-38	0	intron_retention	FALSE	canonical	0	0	junction_1	123.649126871012	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805966	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.12	chr8	-	3061	13	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	14266	0	intron_retention	FALSE	canonical	0	0	junction_1	154.682380667253	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	5439	False	NA	-29	True	AATAAA	-14	NA	70791595	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535
ES.33147.13	chr8	-	4659	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.355866214898	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805984	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792101_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.15	chr8	-	4914	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_1	122.014402685953	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805947	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.16	chr8	-	5085	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_1	123.774940224847	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805945	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.18	chr8	-	7401	18	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_1	137.082224712688	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805946	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70793362_70794109_70796075_70796875_70797016_70805427
ES.33147.2	chr8	-	4778	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	-228	-32	-161	32	multi-exon	FALSE	canonical	0	0	junction_1	119.404999372875	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTCCCGGGTGGTCAAC	NA	False	NA	3	True	AAAACA	-43	NA	70806089	70784142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.21	chr8	-	4758	23	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_16	107.953655498724	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805928	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.22	chr8	-	5244	22	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_1	162.069691904482	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805945	70784174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788284_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.25	chr8	-	4509	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	159.453949413212	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTGCTTTTGCGTGGG	NA	False	NA	-30	True	AATAAA	-13	NA	70805952	70784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.27	chr8	-	5068	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_1	150.798659900095	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTGCTTTTGCGTGGG	NA	False	NA	-30	True	AATAAA	-13	NA	70805935	70784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.28	chr8	-	4647	21	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	8912	-1	intron_retention	FALSE	canonical	0	0	junction_1	167.142932844916	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTGCTTTTGCGTGGG	8056	False	NA	-30	True	AATAAA	-13	NA	70796949	70784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792090_70792392_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875
ES.33147.29	chr8	-	4699	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-31	-1	intron_retention	FALSE	canonical	0	0	junction_1	122.058074512582	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTGCTTTTGCGTGGG	NA	False	NA	-30	True	AATAAA	-13	NA	70805959	70784175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.3	chr8	-	4843	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-89	29	intron_retention	FALSE	canonical	3	421	junction_16	57.309367788902	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTGTCCCGGGTGGTC	NA	False	NA	0	True	AATAAA	-43	NA	70806017	70784145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.32	chr8	-	4567	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.346556555275	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCCCTGCTTTTGCGTGG	NA	False	NA	-31	True	AATAAA	-12	NA	70805919	70784176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791980_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.33	chr8	-	4609	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-117	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	158.905970429108	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70806045	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70796875_70797016_70805427
ES.33147.34	chr8	-	4623	24	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	176.495746640622	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805918	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792101_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.35	chr8	-	5363	21	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	8	-3	intron_retention	FALSE	canonical	3	421	junction_14	59.3257743312298	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805920	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.36	chr8	-	4296	22	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	27	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	163.064779915773	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805901	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.37	chr8	-	5380	21	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	445	junction_16	53.135557774432	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805953	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.38	chr8	-	4482	23	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.551188604891	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805947	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795988_70796075_70796875_70797016_70805427
ES.33147.39	chr8	-	5156	23	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	18	junction_1	118.750076120028	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTGCTTTTGCGTG	NA	False	NA	-32	True	AATAAA	-11	NA	70805929	70784177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785126_70785265_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.4	chr8	-	4627	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-27	3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	115.106312329065	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTTGCGTGGGGCGG	NA	False	NA	-26	True	AATAAA	-17	NA	70805955	70784171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785257_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.40	chr8	-	2899	6	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	17496	-8	intron_retention	FALSE	canonical	3	497	junction_4	27.1764604023408	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	8669	False	NA	-37	True	AATAAA	-6	NA	70788365	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785841_70785920_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303
ES.33147.41	chr8	-	4869	23	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-119	-8	intron_retention	FALSE	canonical	0	0	junction_1	121.032037627363	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70806047	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.42	chr8	-	4483	23	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-17	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	179.042586928039	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805945	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.47	chr8	-	5944	19	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-20	-8	intron_retention	FALSE	canonical	0	0	junction_1	130.594994043171	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805948	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70791212_70791535_70791890_70791973_70792083_70792392_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.48	chr8	-	4817	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	9	-8	intron_retention	FALSE	canonical	0	0	junction_1	123.783953403425	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805919	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.49	chr8	-	4570	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-37	-8	intron_retention	FALSE	canonical	0	0	junction_1	182.459811373464	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805965	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.50	chr8	-	5612	20	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	421	junction_13	55.6705286146331	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805944	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.51	chr8	-	5235	22	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-6	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	163.225398183754	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805934	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786719_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.52	chr8	-	4988	22	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-22	-8	intron_retention	FALSE	canonical	0	0	junction_6	120.46706157772	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805950	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788284_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.53	chr8	-	4610	24	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	143.57352568591	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805916	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785257_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.54	chr8	-	4603	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-18	-8	intron_retention	FALSE	canonical	0	0	junction_1	119.325488953742	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805879	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.55	chr8	-	5999	21	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-16	-8	intron_retention	FALSE	canonical	0	0	junction_1	126.69091324953	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805944	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792750_70793199_70793362_70794109_70794291_70794659_70796075_70796875_70797016_70805427
ES.33147.57	chr8	-	4302	25	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-33	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	153.063961757459	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805961	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70784261_70784568_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.58	chr8	-	1793	14	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	14105	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.08087228832	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	5278	False	NA	-37	True	AATAAA	-6	NA	70791756	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70784278_70785763_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729
ES.33147.60	chr8	-	4548	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	155.375452343433	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACAGTCCCTGCTTTT	NA	False	NA	-37	True	AATAAA	-6	NA	70805945	70784182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786852_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.61	chr8	-	4560	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-1	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.278712295771	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATGAACAAACAG	NA	False	NA	-48	True	NA	NA	NA	70805929	70784193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787889_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.62	chr8	-	4665	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-19	-19	intron_retention	FALSE	canonical	0	0	junction_1	122.062949482485	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATGAACAAACAG	NA	False	NA	-48	True	NA	NA	NA	70805947	70784193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785130_70785269_70785393_70785622_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.63	chr8	-	3792	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	-127	853	-60	-853	multi-exon	FALSE	canonical	0	0	junction_1	119.404999372875	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCACCACTGTGTGAGC	NA	False	NA	NA	False	AATAAA	-41	NA	70805988	70785027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.64	chr8	-	3901	23	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-30	-854	intron_retention	FALSE	canonical	3	421	junction_16	57.309367788902	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGCACCACTGTGTGAG	NA	False	NA	NA	False	AATAAA	-40	NA	70805958	70785028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.65	chr8	-	4021	23	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-117	-854	intron_retention	FALSE	canonical	3	71	junction_16	107.953655498724	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGCACCACTGTGTGAG	NA	False	NA	NA	False	AATAAA	-40	NA	70806045	70785028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.66	chr8	-	3912	23	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-17	-857	intron_retention	FALSE	canonical	0	0	junction_19	150.214976803907	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAAGCACCACTGTGT	NA	False	NA	NA	False	AATAAA	-37	NA	70805945	70785031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794665_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.67	chr8	-	3630	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-22	-858	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	156.182155781315	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGAAGCACCACTGTG	NA	False	NA	NA	False	AATAAA	-36	NA	70805950	70785032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785130_70785270_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794173_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.68	chr8	-	5969	18	NIC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	8	-880	intron_retention	FALSE	canonical	3	421	junction_14	60.9348168382755	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATACCTGTTTTCCACTG	NA	False	NA	NA	False	AATAAA	-14	NA	70805920	70785054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70793362_70794109_70796075_70796875_70797016_70805427
ES.33147.69	chr8	-	3739	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	-20	899	-20	-899	multi-exon	FALSE	canonical	0	0	junction_1	146.934304983882	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	70805948	70785073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.7	chr8	-	4666	24	NNC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	-152	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.934304983882	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTTGCGTGGGGCGG	NA	False	NA	-26	True	AATAAA	-17	NA	70806080	70784171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785023_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33147.8	chr8	-	9720	14	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	15	3	intron_retention	FALSE	canonical	3	445	junction_11	61.6189857777944	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTTGCGTGGGGCGG	NA	False	NA	-26	True	AATAAA	-17	NA	70805913	70784171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70788040_70788303_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70793362_70794109_70796075_70796875_70797016_70805427
ES.33147.9	chr8	-	4558	24	NNC	ENSMUSG00000058301.9	novel	4518	24	NA	NA	-79	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.404999372875	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTTTTGCGTGGGGC	NA	False	NA	-28	True	AATAAA	-15	NA	70806007	70784173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70785023_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ES.33148.1	chr8	+	177	1	Intergenic	novelGene_27022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	70807748	70807925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70807700_70807900
ES.33149.1	chr8	-	181	1	Intergenic	novelGene_27023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGATGACAATCCA	NA	False	NA	NA	False	NA	NA	NA	70821377	70821196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70821200_70821400
ES.3315.1	chr10	+	560	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	-60	0	-60	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6282	False	NA	30	True	AATAAA	-21	NA	80128226	80129948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ES.3315.2	chr10	+	492	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3274.94593678871	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	6343	False	NA	29	True	AATAAA	-20	NA	80128287	80129947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80128318_80128608_80128689_80129475_80129711_80129800
ES.3315.3	chr10	+	1369	2	ISM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	1	1	1	-1	intron_retention	FALSE	canonical	3	5732	junction_1	0	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	6343	False	NA	29	True	AATAAA	-20	NA	80128287	80129947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80128318_80128608
ES.3315.4	chr10	+	1655	1	NIC	ENSMUSG00000063457.15	novel	500	4	NA	NA	6	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	628	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	6348	False	NA	29	True	AATAAA	-20	NA	80128292	80129947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80128300_80129900
ES.3315.5	chr10	+	784	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	-186	-26	6	-1	multi-exon	FALSE	canonical	3	7729	junction_2	373	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	6348	False	NA	29	True	AATAAA	-20	NA	80128292	80129947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80128695_80129475_80129711_80129800
ES.3315.6	chr10	+	571	3	ISM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	15	4	15	-4	intron_retention	FALSE	canonical	3	5732	junction_1	1371.5	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCTGGGTTTTTGTTT	6357	False	NA	26	True	AATAAA	-17	NA	80128301	80129944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80128318_80128608_80128695_80129475
ES.3315.7	chr10	+	608	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	6367	False	NA	29	True	AATAAA	-20	NA	80128311	80129947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
ES.3315.8	chr10	+	456	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	131	0	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_2	4232	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6665	False	NA	30	True	AATAAA	-21	NA	80128609	80129948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80128695_80129475_80129699_80129800
ES.33150.1	chr8	+	2422	19	FSM	ENSMUSG00000031849.10	ENSMUST00000003659.9	2416	19	-7	1	-7	0	multi-exon	FALSE	canonical	0	0	junction_8	1.24225998749988	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGGCTTTGGTCGCT	NA	False	NA	NA	False	AATAAA	-16	NA	70826200	70834715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70826298_70826502_70826589_70827022_70827075_70827454_70827625_70828379_70828518_70828691_70828767_70828846_70829006_70829087_70829193_70829285_70829394_70829746_70829907_70831263_70831383_70831547_70831601_70831683_70831866_70832043_70832223_70832330_70832380_70832754_70832952_70833894_70834068_70834321_70834462_70834535
ES.33151.1	chr8	-	5734	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-48	-3	-48	3	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTCCTCTTTTTCCAA	5165	False	NA	-1	True	AATAAA	-21	NA	70892277	70835001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.10	chr8	-	1739	12	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-32	6925	intron_retention	FALSE	canonical	0	0	junction_1	20.4604032016369	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATGAAGACTCAGGAGC	5181	False	NA	NA	False	NA	NA	NA	70892261	70843479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70843753_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.11	chr8	-	1722	14	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-97	6924	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.7447645048131	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATGAAGACTCAGGAG	5116	False	NA	NA	False	NA	NA	NA	70892326	70843480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70843753_70843851_70843954_70844510_70844562_70844699_70844814_70845571_70845706_70850042_70850100_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.12	chr8	-	1333	6	NIC	ENSMUSG00000003575.14	novel	10265	14	NA	NA	-13	615	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	28.5475042692001	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTAAGCCTCTGCACGTC	5200	False	NA	NA	False	ATTAAA	-25	NA	70892242	70849789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70850605_70850945_70850987_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.13	chr8	-	1041	7	NIC	ENSMUSG00000003575.14	novel	10265	14	NA	NA	-14	258	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	21.6487105081727	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAGTATTTTGCCCACGT	5199	False	NA	NA	False	AAGAAA	-14	NA	70892243	70850146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70892082
ES.33151.14	chr8	-	1391	5	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-32	529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8261252835967	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTATATAGTAACT	5181	False	NA	-22	True	NA	NA	NA	70892261	70856969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70857676_70857719_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.15	chr8	-	1254	4	NNC	ENSMUSG00000003575.14	novel	870	4	NA	NA	-38	529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3647658929996	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTATATAGTAACT	5175	False	NA	-22	True	NA	NA	NA	70892267	70856969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70857610_70857679_70857971_70858727_70858866_70892082
ES.33151.2	chr8	-	5622	15	NIC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-49	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	18.0759452289048	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCCTCTTCCTCTTTT	5164	False	NA	-6	True	AATAAA	-16	NA	70892278	70835006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844562_70844669_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.3	chr8	-	5621	13	NIC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-36	-3	intron_retention	FALSE	canonical	1	2	junction_9	19.1113331705445	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGGCCTCTTCCTCTTT	5177	False	NA	-7	True	AATAAA	-15	NA	70892265	70835007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.4	chr8	-	2664	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	-167	3186	-167	-3186	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTATATTCCTGAGCG	5046	False	NA	NA	False	AATAAA	-17	NA	70892396	70838190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.5	chr8	-	2577	15	NNC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-32	-3187	intron_retention	FALSE	canonical	0	0	junction_5	21.0809905665105	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	5181	False	NA	NA	False	AATAAA	-16	NA	70892261	70838191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845363_70845413_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ES.33151.6	chr8	-	3226	10	ISM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	35860	3187	-921	-3187	3prime_fragment	FALSE	canonical	3	29	junction_8	3.82970843102535	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	7388	False	NA	NA	False	AATAAA	-16	NA	70856369	70838191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080
ES.33151.7	chr8	-	3190	12	NIC	ENSMUSG00000003575.14	novel	5683	14	NA	NA	-32	-3187	intron_retention	FALSE	canonical	1	2	junction_9	16.9291181495763	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	5181	False	NA	NA	False	AATAAA	-16	NA	70892261	70838191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70857908_70858866_70861544_70861662_70892082
ES.33151.8	chr8	-	3655	5	ISM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	45223	3192	8442	-3192	intron_retention	FALSE	canonical	3	36	junction_2	1.4790199457749	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGCCTTTTATATTCC	9990	False	NA	NA	False	AATAAA	-11	NA	70847006	70838196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510
ES.33151.9	chr8	-	1634	11	NNC	ENSMUSG00000003575.14	novel	695	4	NA	NA	-44	6925	intron_retention	FALSE	canonical	0	0	junction_1	20.225973400556	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATGAAGACTCAGGAGC	5169	False	NA	NA	False	NA	NA	NA	70892273	70843479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70843753_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70892082
ES.33152.1	chr8	-	2171	2	NNC	ENSMUSG00000055707.14	novel	2734	2	NA	NA	24399	925	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAGCTGACTTGCACG	NA	False	NA	NA	False	CATAAA	-17	NA	70904149	70901943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70902828_70902862
ES.33152.10	chr8	-	2821	4	NNC	ENSMUSG00000055707.14	novel	2974	3	NA	NA	17	6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	22.69116323349	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACCTGTGCTCTACGC	NA	False	NA	-12	True	AATAAA	-22	NA	70929582	70902911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905294_70905394_70905568_70908115_70908299_70929499
ES.33152.11	chr8	-	2911	3	FSM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	28	35	-16	6	multi-exon	FALSE	canonical	2	11	junction_1	21.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACCTGTGCTCTACGC	NA	False	NA	-12	True	AATAAA	-22	NA	70929571	70902911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70905568_70908115_70908299_70929499
ES.33152.12	chr8	-	6116	1	NIC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	19515	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGAGCAGACCTGTGCT	NA	False	NA	-18	True	AATAAA	-16	NA	70909033	70902917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70902900_70909000
ES.33152.13	chr8	-	3412	5	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.5372045918796	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGGAGCAGACCTGT	NA	False	NA	-21	True	AATAAA	-13	NA	70929609	70902920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70928982_70929223_70929499
ES.33152.14	chr8	-	3336	5	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	22.9932055181525	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGGAGCAGACCTGT	NA	False	NA	-21	True	AATAAA	-13	NA	70929570	70902920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929019_70929223_70929499
ES.33152.15	chr8	-	3311	5	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.5372045918796	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGATGGAGCAGACCTG	NA	False	NA	-22	True	AATAAA	-12	NA	70929609	70902921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929082_70929223_70929499
ES.33152.16	chr8	-	2753	4	NNC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24.7521042876493	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGATGGAGCAGACCT	NA	False	NA	-23	True	AATAAA	-11	NA	70929589	70902922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905294_70905394_70905504_70908115_70908299_70929499
ES.33152.17	chr8	-	2843	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-63	211	0	-74	multi-exon	FALSE	canonical	3	54	junction_2	2	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTAATTTTTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	70929618	70903128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70905670_70908115_70908299_70929499
ES.33152.18	chr8	-	2959	4	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-6	-76	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	22.4251842554055	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTTGTTTAATTTTT	NA	False	NA	NA	False	TTTAAA	-17	NA	70929606	70903130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929499
ES.33152.19	chr8	-	5241	2	NIC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	21	-82	intron_retention	FALSE	canonical	3	54	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCATATTTTGTTTA	NA	False	NA	NA	False	TTTAAA	-11	NA	70929578	70903136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70908299_70929499
ES.33152.2	chr8	-	3062	4	NNC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	-6	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.64279609239471	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGTGCCACCTGTGTG	NA	False	NA	38	True	NA	NA	NA	70929606	70902861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905504_70908115_70908299_70928456_70928587_70929499
ES.33152.20	chr8	-	4579	2	NIC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	1	-489	intron_retention	FALSE	canonical	3	54	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTAGCCTGGATTTC	NA	False	NA	NA	False	ACTAAA	-12	NA	70929598	70903818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70908299_70929499
ES.33152.21	chr8	-	2259	4	NNC	ENSMUSG00000055707.14	novel	2615	3	NA	NA	5	-489	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	22.4251842554055	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTAGCCTGGATTTC	NA	False	NA	NA	False	ACTAAA	-12	NA	70929594	70903818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929499
ES.33152.22	chr8	-	6629	1	Intergenic	novelGene_27024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTTGGGCAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	70918790	70912161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70912200_70918800
ES.33152.23	chr8	-	5407	3	NNC	ENSMUSG00000055707.14	novel	2919	3	NA	NA	5	-20021	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTTGTCATAACCTG	NA	False	NA	NA	False	NA	NA	NA	70929594	70923350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70926280_70926839_70929223_70929499
ES.33152.3	chr8	-	3741	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	-694	-56	-631	7	multi-exon	FALSE	canonical	3	54	junction_2	2	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGTGCCACCTGTGTG	NA	False	NA	38	True	NA	NA	NA	70930249	70902861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70905670_70908115_70908299_70929499
ES.33152.4	chr8	-	5547	2	NIC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	5	3	intron_retention	FALSE	canonical	3	54	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGACCTGTGCCACCTG	NA	False	NA	34	True	NA	NA	NA	70929613	70902865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70908299_70929499
ES.33152.5	chr8	-	3216	4	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	22.4251842554055	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGACCTGTGCCACC	NA	False	NA	32	True	NA	NA	NA	70929600	70902867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70928456_70928587_70929499
ES.33152.6	chr8	-	3626	7	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.194863109306	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGTGACCTGTGCCA	NA	False	NA	30	True	NA	NA	NA	70929574	70902869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70905670_70908115_70908299_70908839_70908950_70917298_70917424_70928456_70928587_70929019_70929223_70929499
ES.33152.7	chr8	-	5668	3	NNC	ENSMUSG00000055707.14	novel	2991	3	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	9	junction_2	1.5	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGACCTGTGCC	NA	False	NA	29	True	NA	NA	NA	70929609	70902870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70908299_70928456_70928587_70929499
ES.33152.8	chr8	-	2907	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	11	-184	-7	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGTGTGACCTGTGCC	NA	False	NA	29	True	NA	NA	NA	70929607	70902870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70905670_70929499
ES.33152.9	chr8	-	4231	2	ISM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	18964	-422	18964	10	3prime_fragment	FALSE	canonical	3	58	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGCTCTACGCCTGC	NA	False	NA	-8	True	AATAAA	-26	NA	70909584	70902907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70905670_70908115
ES.33153.1	chr8	-	1896	9	NNC	ENSMUSG00000035964.9	novel	1491	8	NA	NA	-1153	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.31695671910659	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAATAGGGTGGCTG	NA	False	NA	NA	False	AATAAA	-4	NA	70941161	70936525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70937085_70937183_70937302_70937381_70937497_70937729_70937833_70938324_70938478_70938686_70938785_70938877_70939023_70939817_70940148_70940886
ES.33153.2	chr8	-	2529	9	NNC	ENSMUSG00000035964.9	novel	1491	8	NA	NA	-1135	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1.31695671910659	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAATAGGGTGGCTG	NA	False	NA	NA	False	AATAAA	-4	NA	70941143	70936525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70937085_70937183_70937302_70937381_70937497_70937729_70937833_70938324_70938478_70938686_70938785_70938877_70939023_70939817_70940361_70940448
ES.33154.1	chr8	+	1669	9	FSM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	-33	8	-33	-8	multi-exon	FALSE	canonical	0	0	junction_1	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGATGGCCAGTGTGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	70945774	70956723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956246_70956290_70956470
ES.33154.3	chr8	+	2936	1	NIC	ENSMUSG00000007888.16	novel	1644	9	NA	NA	9	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-23	NA	70953791	70956727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70953800_70956700
ES.33155.1	chr8	-	664	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	15	-8	-1	1	multi-exon	FALSE	canonical	3	28	junction_1	340.250918441082	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCAGCTCTGTATCTT	NA	False	NA	-4	True	AATAAA	-21	NA	70959372	70956940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ES.33155.3	chr8	-	631	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	0	1	0	-1	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959076	70956945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
ES.33155.4	chr8	-	683	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	-13	1	-13	-1	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959415	70956945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ES.33155.5	chr8	-	1870	3	NIC	ENSMUSG00000058833.12	novel	671	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	754	junction_2	43.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959371	70956945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70957160_70957633_70959230_70959311
ES.33155.6	chr8	-	577	4	NNC	ENSMUSG00000058833.12	novel	632	4	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	403.959018823555	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959107	70956945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70957160_70957633_70957711_70958405_70958611_70959026
ES.33155.8	chr8	-	628	4	NIC	ENSMUSG00000058833.12	novel	632	4	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	380.006140301268	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	False	NA	-9	True	AATAAA	-16	NA	70959054	70956945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70957179_70957633_70957711_70958405_70958611_70958941
ES.33156.1	chr8	+	795	1	Antisense	novelGene_ENSMUSG00000090137.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCCTAGCAGTTG	NA	False	NA	NA	False	NA	NA	NA	70963166	70963961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70963200_70964000
ES.33157.1	chr8	+	2887	2	Antisense	novelGene_ENSMUSG00000055553.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAACCAAATTAAACC	NA	False	NA	NA	False	NA	NA	NA	70964041	70967405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_70965002_70965478
ES.33158.1	chr8	+	213	1	Intergenic	novelGene_27025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATGAAA	NA	False	NA	NA	False	NA	NA	NA	70969773	70969986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70969800_70970000
ES.33159.1	chr8	+	157	1	Intergenic	novelGene_27026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	70978453	70978610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_70978500_70978600
ES.3316.1	chr10	-	173	1	Intergenic	novelGene_2573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	989	False	NA	NA	False	NA	NA	NA	80140383	80140210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80140200_80140400
ES.33160.1	chr8	+	1975	8	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	-24	-1	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	458.365107123755	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980372	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.10	chr8	+	4162	19	Fusion	ENSMUSG00000019428.17_ENSMUSG00000070002.8	novel	1698	9	NA	NA	1	2	multi-exon	TRUE	canonical	0	0	junction_1	544.44283446474	942	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTTTGAGTATGT	NA	False	NA	10	True	AATAAA	-18	NA	70980397	71045510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036652_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.12	chr8	+	2503	8	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	611.708147029985	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980397	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984200_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.15	chr8	+	2266	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_1	533.698191865028	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTACTGCTTTCTAGGCC	NA	False	NA	21	True	AATAAA	-13	NA	70980399	70987972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.16	chr8	+	3027	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_1	537.694113785896	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTTCTAGGCCTCT	NA	False	NA	24	True	AATAAA	-16	NA	70980400	70987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70985400_70986766_70986845_70987132
ES.33160.17	chr8	+	2022	7	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_1	489.040017676354	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980400	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.18	chr8	+	1692	9	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	448.998590615828	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980400	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980491_70982046_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.2	chr8	+	3588	6	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	5	-6	intron_retention	FALSE	canonical	3	268	junction_2	428.953890295915	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	False	NA	19	True	AATAAA	-11	NA	70980378	70987970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.23	chr8	+	4358	4	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	668.651046676981	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980411	70987978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70985400_70986766_70986845_70987132
ES.33160.25	chr8	+	1789	9	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	523.512401357408	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	False	NA	19	True	AATAAA	-11	NA	70980414	70987970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980605_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.27	chr8	+	4313	6	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	268	junction_3	432.008981388119	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980418	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70983760_70983834_70983924_70984174_70985400_70986766_70986845_70987132
ES.33160.28	chr8	+	2505	8	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	11	-1	intron_retention	FALSE	canonical	2	5	junction_1	477.973613822148	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTTCTAGGCCTCT	NA	False	NA	24	True	AATAAA	-16	NA	70980422	70987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980493_70982046_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.29	chr8	+	2571	7	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_1	514.790140629062	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTACTGCTTTCTAGGCC	NA	False	NA	21	True	AATAAA	-13	NA	70980428	70987972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.3	chr8	+	1717	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	-15	-4	8	2	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTAGGCCTCTTTCTG	NA	False	NA	29	True	AATAAA	-21	NA	70980381	70987980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.30	chr8	+	1865	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	-66	0	18	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980429	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.31	chr8	+	1989	8	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_1	647.873223930202	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980433	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983924_70984174_70984648_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.32	chr8	+	2108	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	-58	1	26	0	intron_retention	FALSE	canonical	3	550	junction_1	284.398039546617	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980437	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.33	chr8	+	1663	9	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.413667612212	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980438	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987510
ES.33160.36	chr8	+	2811	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_1	559.390883014731	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980441	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.37	chr8	+	1639	9	NNC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.413667612212	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980441	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987531
ES.33160.39	chr8	+	2702	7	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	32	-6	intron_retention	FALSE	canonical	0	0	junction_1	624.544300537066	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	False	NA	19	True	AATAAA	-11	NA	70980443	70987970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984200_70985400_70986766_70986845_70987132
ES.33160.40	chr8	+	1558	9	NNC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	606.723165867268	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980444	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987037_70987080_70987516
ES.33160.43	chr8	+	2427	9	NNC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	448.998590615828	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980483	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70981302_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.45	chr8	+	1892	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	459.817202130368	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTACTGCTTTCTAGGCC	NA	False	NA	21	True	AATAAA	-13	NA	70980492	70987972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987037_70987265_70987516
ES.33160.46	chr8	+	3304	7	ISM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	200	0	-62	0	intron_retention	FALSE	canonical	3	934	junction_3	165.713273122248	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980596	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.47	chr8	+	2728	7	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	550	junction_1	307.065501517546	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980652	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132
ES.33160.48	chr8	+	2538	7	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	2	-4	intron_retention	FALSE	canonical	3	550	junction_1	330.278502008364	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTACTGCTTTCTAGGCC	NA	False	NA	21	True	AATAAA	-13	NA	70980660	70987972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980686_70982040_70982326_70983589_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.49	chr8	+	3804	7	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	19	-1	intron_retention	FALSE	canonical	3	934	junction_3	180.047601730456	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTTCTAGGCCTCT	NA	False	NA	24	True	AATAAA	-16	NA	70980677	70987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.5	chr8	+	2870	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_1	532.081798222792	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980386	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70983924_70984171_70985400_70986766_70986845_70987132
ES.33160.50	chr8	+	3090	8	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	20	-5	intron_retention	FALSE	canonical	3	81	junction_1	516.262628940752	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTACTGCTTTCTAGGC	NA	False	NA	20	True	AATAAA	-12	NA	70980678	70987971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132
ES.33160.51	chr8	+	3932	7	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	21	0	intron_retention	FALSE	canonical	3	81	junction_1	464.794369109132	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980679	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132
ES.33160.52	chr8	+	3677	8	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	81	junction_1	453.143757880568	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980682	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.53	chr8	+	3046	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	223	0	intron_retention	FALSE	canonical	3	934	junction_3	177.427168156402	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70981688	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132
ES.33160.54	chr8	+	1658	9	NIC	ENSMUSG00000019428.17	novel	599	4	NA	NA	400	-1	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	424.114076635049	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTTCTAGGCCTCT	NA	False	NA	24	True	AATAAA	-16	NA	70981865	70987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.55	chr8	+	1611	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	1543	0	573	0	3prime_fragment	FALSE	canonical	3	934	junction_3	172.710918081312	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70982038	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.56	chr8	+	1934	6	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	573	0	intron_retention	FALSE	canonical	3	1156	junction_2	118.41790405171	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70982038	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.57	chr8	+	2520	6	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	573	0	intron_retention	FALSE	canonical	3	934	junction_2	195.569527278664	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70982038	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.58	chr8	+	3024	4	NNC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	573	0	intron_retention	FALSE	canonical	0	0	junction_2	626.472842366069	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70982038	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70982326_70983589_70985404_70986766_70986845_70987132
ES.33160.6	chr8	+	3113	5	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	593.619143475006	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980391	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70985400_70986766_70986845_70987132
ES.33160.60	chr8	+	1159	6	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	3334	0	56	0	3prime_fragment	FALSE	canonical	3	934	junction_1	203.325945220968	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70983829	70987977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.61	chr8	+	3166	12	NNC	ENSMUSG00000070002.8	novel	457	5	NA	NA	-464	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.4330490763211	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACCTCTCTGTGGTTTG	NA	False	NA	3	True	AATAAA	-11	NA	70991642	71045503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70991896_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.62	chr8	+	3136	12	NIC	ENSMUSG00000070002.8	novel	457	5	NA	NA	-184	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	42.1565363107432	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70991922	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992143_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.63	chr8	+	3490	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	-414	-4	-183	4	multi-exon	FALSE	canonical	3	95	junction_2	19.7818683154445	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTTTGAGTATGTCA	NA	False	NA	12	True	AATAAA	-20	NA	70991923	71045512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.64	chr8	+	5388	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	-21	-3	intron_retention	FALSE	canonical	3	95	junction_2	20.6709941705763	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTGTGGTTTGAG	NA	False	NA	5	True	AATAAA	-13	NA	70992316	71045505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.66	chr8	+	3217	12	NNC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.0308365310504	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTGTGGTTTGAG	NA	False	NA	5	True	AATAAA	-13	NA	70992324	71045505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70992492_71025512_71025561_71031351_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.67	chr8	+	4244	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	-8	4	intron_retention	FALSE	canonical	3	95	junction_2	20.7173840047435	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTTTGAGTATGTCA	NA	False	NA	12	True	AATAAA	-20	NA	70992329	71045512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.68	chr8	+	3398	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	95	junction_2	19.9321348580627	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70992329	71045508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.69	chr8	+	2829	12	NNC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	44.0152114952911	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992343	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038438_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.70	chr8	+	2796	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	43.6394317103236	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992345	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.71	chr8	+	2736	12	NNC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	42.980872163101	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992347	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038527_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.72	chr8	+	3298	10	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	10	-2	intron_retention	FALSE	canonical	1	3	junction_4	45.9879211194514	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992347	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71044065_71044147
ES.33160.73	chr8	+	3647	10	ISM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	10	2	10	-2	intron_retention	FALSE	canonical	3	95	junction_2	20.8989337550691	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992347	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343
ES.33160.74	chr8	+	3011	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	44.5646721069504	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992348	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.75	chr8	+	6834	9	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	11	-3	intron_retention	FALSE	canonical	3	95	junction_2	22.0166840146285	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCTCTGTGGTTTGAG	NA	False	NA	5	True	AATAAA	-13	NA	70992348	71045505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71034471_71036521_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ES.33160.76	chr8	+	3574	9	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	95	junction_2	20.9787839256712	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70992349	71045508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71038679_71043169_71043516_71044019
ES.33160.77	chr8	+	3138	11	ISM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	15	2	15	-2	intron_retention	FALSE	canonical	3	95	junction_2	20.338141508014	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCTGTGGTTTGAGT	NA	False	NA	6	True	AATAAA	-14	NA	70992352	71045506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019
ES.33160.8	chr8	+	2534	8	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	479.613790205309	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980394	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70985400_70986766_70986845_70987132_70987265_70987516
ES.33160.9	chr8	+	4663	4	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1247	junction_1	82.2475936831386	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980394	70987976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_70982326_70983589_70985400_70986766_70986845_70987132
ES.33161.1	chr8	-	1413	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	214	-916	12	916	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCGTGATGG	NA	False	NA	NA	False	NA	NA	NA	70963017	70959996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ES.33161.12	chr8	-	826	7	FSM	ENSMUSG00000055553.17	ENSMUST00000121623.8	884	7	65	-7	6	7	multi-exon	FALSE	canonical	3	76	junction_3	10409.9140993361	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTCTAGAGTGACT	NA	False	NA	-6	True	AATAAA	-26	NA	70975748	70960914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.13	chr8	-	3749	6	NIC	ENSMUSG00000055553.17	novel	884	7	NA	NA	6	7	intron_retention	FALSE	canonical	3	76	junction_3	10854.3554870844	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTCTAGAGTGACT	NA	False	NA	-6	True	AATAAA	-26	NA	70975748	70960914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70961179_70961945_70962033_70962170_70962285_70968044_70971168_70972586_70972712_70975712
ES.33161.19	chr8	-	2102	1	NIC	ENSMUSG00000090137.9	novel	711	4	NA	NA	12	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1094	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGTCTAGAGTGAC	NA	False	NA	-7	True	AATAAA	-25	NA	70963017	70960915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70960900_70963000
ES.33161.2	chr8	-	557	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	158	-4	-6	4	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGAGTGACTGTTCTG	NA	False	NA	0	True	AATAAA	-32	NA	70963073	70960908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ES.33161.26	chr8	-	545	4	NNC	ENSMUSG00000090137.9	novel	705	4	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	10632.7179445751	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70962994	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962908
ES.33161.27	chr8	-	799	5	NNC	ENSMUSG00000090137.9	novel	520	4	NA	NA	-312	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11129.8463376634	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70963763	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70963333_70963622_70963711
ES.33161.28	chr8	-	1114	4	NNC	ENSMUSG00000090137.9	novel	705	4	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	609	junction_3	10346.6067008572	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70963025	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962370
ES.33161.29	chr8	-	579	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	638	junction_3	10332.9375085479	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70962987	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962867
ES.33161.30	chr8	-	804	7	NIC	ENSMUSG00000055553.17	novel	917	7	NA	NA	116	1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	10460.053866443	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70980317	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70961179_70961945_70962033_70962170_70962282_70968044_70968092_70971014_70971168_70972586_70972712_70980294
ES.33161.31	chr8	-	1329	2	ISM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	-11	8	-11	-5	intron_retention	FALSE	canonical	3	22365	junction_1	0	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	False	NA	-12	True	AATAAA	-20	NA	70963016	70960920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70961179_70961945
ES.33161.34	chr8	-	508	4	NNC	ENSMUSG00000090137.9	novel	705	4	NA	NA	-314	-10	at_least_one_novel_splicesite	FALSE	canonical	2	399	junction_3	10445.5906274157	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGCAGTAATTGGTGT	NA	False	NA	-17	True	AATAAA	-15	NA	70963765	70960925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70963711
ES.33161.35	chr8	-	1802	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	88	-674	-2	674	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGTAGTGCCCACAT	NA	False	NA	NA	False	NA	NA	NA	70975742	70965371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.36	chr8	-	5711	4	NNC	ENSMUSG00000055553.17	novel	424	5	NA	NA	1658	674	intron_retention	FALSE	non_canonical	0	0	junction_1	350.36869469492	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGTAGTGCCCACAT	NA	False	NA	NA	False	NA	NA	NA	70974082	70965371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70969670_70970824_70971168_70972586_70972712_70973137
ES.33161.37	chr8	-	7228	1	NIC	ENSMUSG00000055553.17	novel	884	7	NA	NA	3108	641	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70972632	70965404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70965400_70972600
ES.33161.38	chr8	-	1232	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	-6	-10	-6	10	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGGCTTGCTTCTGTT	NA	False	NA	-3	True	AATAAA	-30	NA	70975836	70966035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.39	chr8	-	3556	5	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	273.836173651327	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACAGTGGCTTGCTTCT	NA	False	NA	-6	True	AATAAA	-27	NA	70975741	70966038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70966819_70968044_70968092_70968592_70971168_70972586_70972712_70975712
ES.33161.40	chr8	-	985	4	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	6	4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	220.568961249462	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCAACAGTGGCTTGCT	NA	False	NA	-9	True	AATAAA	-24	NA	70975748	70966041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70966819_70968044_70968092_70972586_70972712_70975712
ES.33161.41	chr8	-	3680	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	23	2	intron_retention	FALSE	canonical	3	22	junction_4	289.113299590316	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATAGCAACAGTGGCTTG	NA	False	NA	-11	True	AATAAA	-22	NA	70975717	70966043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70973137
ES.33161.42	chr8	-	2358	4	ISM	ENSMUSG00000055553.17	ENSMUST00000121623.8	884	7	65	5126	6	-2	5prime_fragment	FALSE	canonical	3	383	junction_3	163.833926753757	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTATAGCAACAGTGG	NA	False	NA	-15	True	AATAAA	-18	NA	70975748	70966047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.43	chr8	-	1710	5	NIC	ENSMUSG00000055553.17	novel	639	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	9	junction_1	297.420052282962	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTATAGCAACAGTGG	NA	False	NA	-15	True	AATAAA	-18	NA	70975746	70966047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70967399_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.44	chr8	-	4059	4	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	1	-3	intron_retention	FALSE	canonical	3	383	junction_3	152.488250913527	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70975753	70966048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70966819_70968044_70971168_70972586_70972712_70975712
ES.33161.45	chr8	-	3281	4	NNC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	307.832205376024	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTTATAGCAACAGTG	NA	False	NA	-16	True	AATAAA	-17	NA	70975745	70966048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70967754_70969749_70971168_70972586_70972712_70975712
ES.33161.46	chr8	-	1421	5	NIC	ENSMUSG00000055553.17	novel	1216	5	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_4	284.550852221532	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACTTATAGCAACAGT	NA	False	NA	-17	True	AATAAA	-16	NA	70980621	70966049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70980294
ES.33161.47	chr8	-	3781	6	NNC	ENSMUSG00000055553.17	novel	424	5	NA	NA	8	-9	intron_retention	FALSE	canonical	0	0	junction_3	317.541556335545	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGGAACACTTATAGCA	NA	False	NA	-22	True	AATAAA	-11	NA	70975732	70966054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_70966819_70968044_70968092_70969234_70969332_70971014_70971168_70972586_70972712_70973137
ES.33161.48	chr8	-	1328	6	FSM	ENSMUSG00000055553.17	ENSMUST00000155677.8	639	6	33	-722	16	-9	multi-exon	FALSE	canonical	2	3	junction_1	323.170543212094	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGGAACACTTATAGCA	NA	False	NA	-22	True	AATAAA	-11	NA	70975797	70966054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70966819_70967244_70967399_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.49	chr8	-	992	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	82	142	6	66	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGACTGTTTCTTGAG	NA	False	NA	NA	False	AATAGA	-18	NA	70975748	70966187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ES.33161.6	chr8	-	741	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	-38	2	-14	-1	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGTCTAGAGTGACT	NA	False	NA	-6	True	AATAAA	-26	NA	70963043	70960914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
ES.33162.1	chr8	-	3385	1	Intergenic	novelGene_27027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCACAGGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	71001740	70998355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_70998400_71001700
ES.33162.2	chr8	-	2990	2	Antisense	novelGene_ENSMUSG00000070002.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	71001740	70998374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_71000870_71001245
ES.33162.3	chr8	-	158	1	Intergenic	novelGene_27028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	71000385	71000227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71000200_71000400
ES.33163.1	chr8	-	4501	4	Antisense	novelGene_ENSMUSG00000070002.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGGCCTGCCATAATAA	NA	False	NA	NA	False	NA	NA	NA	71033428	71028484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_71030304_71030408_71031093_71031296_71031607_71031740
ES.33163.2	chr8	-	4421	5	Antisense	novelGene_ENSMUSG00000070002.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	71033429	71028501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_71030293_71030397_71030791_71030854_71031093_71031296_71031607_71031740
ES.33163.3	chr8	-	178	1	Intergenic	novelGene_27029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	71032490	71032312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71032300_71032500
ES.33164.1	chr8	+	1992	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	-155	-1	-47	1	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71046975	71049939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.10	chr8	+	2088	8	NIC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	300	junction_1	52.332531732671	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047139	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71049063_71049145_71049562_71049646
ES.33164.11	chr8	+	1786	11	NNC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.732891480312	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047150	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047818_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.12	chr8	+	1861	11	NNC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.732891480312	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTTGTGTGCTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	71047151	71049939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047743_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.13	chr8	+	2135	8	NIC	ENSMUSG00000019139.11	novel	1916	10	NA	NA	15	-4	intron_retention	FALSE	canonical	3	300	junction_1	50.9729820391076	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047154	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047399_71047472_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049562_71049646
ES.33164.14	chr8	+	1981	9	ISM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	24	0	15	0	intron_retention	FALSE	canonical	3	300	junction_1	51.2536584060104	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047154	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145
ES.33164.15	chr8	+	1803	11	NNC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	121.802955629164	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047154	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049054_71049145_71049260_71049343_71049562_71049646
ES.33164.16	chr8	+	1901	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	15	0	15	0	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047154	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.17	chr8	+	1755	11	NNC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.938437341425	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047157	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71047194_71047269_71047345_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.18	chr8	+	2055	8	NIC	ENSMUSG00000019139.11	novel	1916	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	300	junction_1	46.070487255057	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047157	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049260_71049343_71049562_71049646
ES.33164.19	chr8	+	2210	7	NIC	ENSMUSG00000019139.11	novel	1916	10	NA	NA	18	0	intron_retention	FALSE	canonical	3	300	junction_1	54.8594162888702	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047157	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049562_71049646
ES.33164.2	chr8	+	2505	5	ISM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	-164	4	-47	-4	intron_retention	FALSE	canonical	3	300	junction_1	35.3906767383728	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71046975	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354
ES.33164.20	chr8	+	1877	10	ISM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	40	4	31	-4	intron_retention	FALSE	canonical	3	300	junction_1	49.7574363199693	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047170	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343
ES.33164.21	chr8	+	1782	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	126	6	117	-4	multi-exon	FALSE	canonical	3	316	junction_3	42.074302294634	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047256	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.22	chr8	+	2088	2	ISM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	561	0	-4	0	intron_retention	FALSE	canonical	3	339	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047700	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71048205_71048354
ES.33164.23	chr8	+	1548	8	ISM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	588	4	14	-4	3prime_fragment	FALSE	canonical	3	316	junction_1	47.1978034770817	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047718	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.3	chr8	+	1583	11	NNC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	123.786954078368	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047095	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049455_71049827
ES.33164.4	chr8	+	1932	10	NIC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	300	junction_1	51.7711011432078	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047108	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ES.33164.5	chr8	+	2408	6	NIC	ENSMUSG00000019139.11	novel	1916	10	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	300	junction_1	53.1224999411737	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCTCCTTGTGTGCTT	NA	False	NA	16	True	AATAAA	-12	NA	71047118	71049936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047399_71047472_71048505_71048599_71048816_71048897_71049063_71049145
ES.33164.6	chr8	+	1931	10	NIC	ENSMUSG00000019139.11	novel	1836	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	300	junction_1	50.7888390578039	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047119	71049938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049562_71049646
ES.33164.8	chr8	+	2324	6	NIC	ENSMUSG00000019139.11	novel	1916	10	NA	NA	0	-4	intron_retention	FALSE	canonical	3	300	junction_1	52.7772678337937	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047122	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71047194_71047269_71048205_71048354_71048505_71048599_71048816_71048897_71049562_71049646
ES.33164.9	chr8	+	2259	6	ISM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	2	4	2	-4	intron_retention	FALSE	canonical	3	300	junction_1	34.7758536918938	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	False	NA	14	True	AATAAA	-10	NA	71047132	71049934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354
ES.33165.1	chr8	-	1815	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	13	intron_retention	TRUE	canonical	3	751	junction_3	219.527565560265	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTTTTACTTGACATG	NA	False	NA	3	True	AATAAA	-30	NA	71060963	71050126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.10	chr8	-	1740	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	4	intron_retention	FALSE	canonical	3	18	junction_7	373.318178263827	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTGCTGATGTCTTTTA	NA	False	NA	-6	True	AATAAA	-21	NA	71060963	71050135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051832_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.11	chr8	-	1628	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-33	4	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	351.765524710708	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTGCTGATGTCTTTTA	NA	False	NA	-6	True	AATAAA	-21	NA	71060997	71050135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.12	chr8	-	1836	15	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-7	3	intron_retention	FALSE	canonical	2	3	junction_10	373.831485554436	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTGCTGATGTCTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	71060944	71050136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052600_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.13	chr8	-	1725	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	60	junction_12	507.985755059874	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTACTGCTGATGTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	71060962	71050138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.14	chr8	-	1659	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	1	intron_retention	FALSE	canonical	2	55	junction_10	375.024352950742	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTACTGCTGATGTCTT	NA	False	NA	-9	True	AATAAA	-18	NA	71060963	71050138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.15	chr8	-	1821	15	NNC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	392.241836324563	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060951	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054994_71055050_71055113_71055223_71055297_71060774
ES.33165.16	chr8	-	1992	14	NIC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	-101	0	intron_retention	FALSE	canonical	3	981	junction_3	173.910063133712	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71061065	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.17	chr8	-	1591	16	NNC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_15	421.685475206344	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060962	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055327_71060774
ES.33165.18	chr8	-	3803	11	NIC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	981	junction_2	176.656842494142	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052550_71053045_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.19	chr8	-	1586	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	428	junction_1	272.959695844562	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060992	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.2	chr8	-	1748	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	-266	-7	-266	7	multi-exon	FALSE	canonical	3	428	junction_1	289.200298236361	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGATGTCTTTTACTT	NA	False	NA	-3	True	AATAAA	-24	NA	71061230	71050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.20	chr8	-	2616	10	NIC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	-44	0	intron_retention	FALSE	canonical	3	981	junction_1	174.63167588448	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71061008	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71051423_71051503_71051559_71051642_71052095_71052174_71052246_71052337_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.21	chr8	-	1522	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_13	409.716563275421	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060960	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054935_71055050_71055113_71055223_71055297_71060774
ES.33165.22	chr8	-	1710	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	TRUE	canonical	3	13	junction_12	473.159576015323	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060937	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052838_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.23	chr8	-	733	3	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-449	0	intron_retention	FALSE	canonical	0	0	junction_2	535	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71051577	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051503
ES.33165.24	chr8	-	1549	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_7	407.468640920174	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051806_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.25	chr8	-	1410	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	141	0	intron_retention	FALSE	canonical	2	4	junction_15	409.14487518346	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060550	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060508
ES.33165.26	chr8	-	1886	14	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	981	junction_2	167.345795837886	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.27	chr8	-	1704	15	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	392.40592269137	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050783_71051184_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.28	chr8	-	2213	15	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	751	junction_3	221.526660301847	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.29	chr8	-	1772	15	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	751	junction_3	220.170342216741	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060929	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.3	chr8	-	1768	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	7	intron_retention	FALSE	canonical	3	60	junction_12	444.276729640435	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGATGTCTTTTACTT	NA	False	NA	-3	True	AATAAA	-24	NA	71060952	71050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.30	chr8	-	1635	14	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	404.76192140288	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060951	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71052011_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.31	chr8	-	1784	15	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	7	0	intron_retention	FALSE	canonical	3	751	junction_2	216.342981661726	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060945	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.32	chr8	-	1833	16	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	60	junction_11	449.101394144153	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060941	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.33	chr8	-	1791	17	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	canonical	2	13	junction_12	457.789798925227	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052763_71052838_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.34	chr8	-	2125	8	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1061	0	intron_retention	FALSE	canonical	3	1104	junction_1	169.064533023726	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71053620	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052550_71053045
ES.33165.35	chr8	-	2113	13	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	1	0	intron_retention	FALSE	canonical	2	13	junction_9	513.428095961082	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060951	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050885_71051188_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052763_71052838_71053045_71053136_71054881_71055113_71055223_71055297_71060774
ES.33165.37	chr8	-	1524	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_16	442.746382678617	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.38	chr8	-	1745	14	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-28	0	intron_retention	FALSE	canonical	2	2	junction_11	382.608734593164	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060992	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71055050_71055113_71055223_71055297_71060774
ES.33165.39	chr8	-	1665	16	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	7	0	intron_retention	FALSE	canonical	3	27	junction_13	373.478221884787	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060945	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055084_71055113_71055223_71055297_71060774
ES.33165.4	chr8	-	1877	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-67	7	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGATGTCTTTTACTT	NA	False	NA	-3	True	AATAAA	-24	NA	71061031	71050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.40	chr8	-	1414	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	55	junction_11	405.286038907502	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060964	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.41	chr8	-	1441	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	408.195107875817	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054935_71055050_71055113_71055223_71055297_71060774
ES.33165.42	chr8	-	1561	18	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	516.412290693433	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060937	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052838_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.43	chr8	-	1619	16	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_13	462.549120514664	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060964	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055084_71055113_71055223_71055297_71060839
ES.33165.44	chr8	-	1470	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	2	10	junction_13	412.129388242408	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060938	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055223_71055297_71060774
ES.33165.45	chr8	-	1855	15	NNC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_10	391.236403558498	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060962	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052600_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.47	chr8	-	1655	15	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	canonical	2	10	junction_13	380.292026619286	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055223_71055297_71060774
ES.33165.48	chr8	-	1955	13	NIC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	1104	junction_1	143.202944569353	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060951	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.49	chr8	-	1708	15	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	392.40592269137	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050773_71051170_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.5	chr8	-	1503	18	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	517.270906113439	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGATGTCTTTTACTT	NA	False	NA	-3	True	AATAAA	-24	NA	71060963	71050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054935_71055050_71055113_71055223_71055297_71060774
ES.33165.50	chr8	-	1705	16	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_15	378.825236751724	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060921	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055327_71060774
ES.33165.51	chr8	-	1977	13	NIC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	981	junction_2	166.613053877006	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060965	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.52	chr8	-	1449	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	374.167190884896	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.54	chr8	-	1398	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_14	408.922193088123	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060950	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055223_71055297_71060774
ES.33165.55	chr8	-	1888	13	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	54	junction_12	383.08365056908	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060949	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050885_71051188_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.56	chr8	-	1395	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_16	399.150112739556	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060950	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.57	chr8	-	1439	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	403.924962090733	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055084_71055113_71055223_71055297_71060774
ES.33165.58	chr8	-	1676	16	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	363.343889754902	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060963	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051254_71051378_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.59	chr8	-	1822	14	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_13	374.106493714094	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060964	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.6	chr8	-	1715	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	7	intron_retention	FALSE	canonical	3	54	junction_16	506.801551398573	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGATGTCTTTTACTT	NA	False	NA	-3	True	AATAAA	-24	NA	71060964	71050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.60	chr8	-	2282	12	NIC	ENSMUSG00000070003.8	novel	1549	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	981	junction_1	159.487142931117	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060966	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.61	chr8	-	1674	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_1	344.430828404711	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71060964	71050140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.63	chr8	-	2296	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	-1	intron_retention	FALSE	canonical	2	3	junction_15	378.20819663249	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTACTGCTGATGT	NA	False	NA	-12	True	AATAAA	-15	NA	71060964	71050141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055876_71060774
ES.33165.64	chr8	-	2353	11	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1127	junction_1	135.731389147831	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTACTGCTGATGT	NA	False	NA	-12	True	AATAAA	-15	NA	71060964	71050141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.65	chr8	-	1469	16	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	54	junction_15	399.911067891628	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGTACTGCTGATGT	NA	False	NA	-12	True	AATAAA	-15	NA	71060941	71050141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
ES.33165.66	chr8	-	1464	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	7	0	intron_retention	FALSE	canonical	2	2	junction_14	413.437092665664	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGTACTGCTGATG	NA	False	NA	-13	True	AATAAA	-14	NA	71060945	71050142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71060774
ES.33165.67	chr8	-	1482	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	481.512185074272	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGTACTGCTGATG	NA	False	NA	-13	True	AATAAA	-14	NA	71060960	71050142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051832_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054959_71055046_71055113_71055223_71055297_71060774
ES.33165.69	chr8	-	1847	14	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	7	0	intron_retention	FALSE	canonical	3	1070	junction_1	155.076083636312	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGTACTGCTGATG	NA	False	NA	-13	True	AATAAA	-14	NA	71060930	71050142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.7	chr8	-	1823	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-98	6	intron_retention	FALSE	canonical	3	751	junction_3	214.93682792858	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGATGTCTTTTACT	NA	False	NA	-4	True	AATAAA	-23	NA	71061062	71050133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.70	chr8	-	1526	18	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	459.404089715208	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGTACTGCTGATG	NA	False	NA	-13	True	AATAAA	-14	NA	71060964	71050142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.71	chr8	-	1818	14	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	1	-4	intron_retention	FALSE	canonical	1	2	junction_11	401.735083012521	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGACTTTGGTACTGCT	NA	False	NA	-17	True	AATAAA	-10	NA	71060936	71050146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050885_71051188_71051268_71051351_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054935_71055050_71055113_71055223_71055297_71060774
ES.33165.72	chr8	-	818	10	ISM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	0	1628	0	11	5prime_fragment	FALSE	canonical	3	1319	junction_7	82.9209053448518	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCAGGCAGGGTGA	NA	False	NA	NA	False	NA	NA	NA	71060964	71051767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ES.33165.8	chr8	-	1751	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	-3	6	intron_retention	FALSE	canonical	3	27	junction_12	368.672279945211	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGATGTCTTTTACT	NA	False	NA	-4	True	AATAAA	-23	NA	71060940	71050133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055084_71055113_71055223_71055297_71060774
ES.33165.9	chr8	-	1763	15	NNC	ENSMUSG00000070003.8	novel	1828	16	NA	NA	-1	5	intron_retention	FALSE	canonical	0	0	junction_14	374.666034963275	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCTGATGTCTTTTAC	NA	False	NA	-5	True	AATAAA	-22	NA	71060963	71050134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060818
ES.33166.1	chr8	-	172	1	Intergenic	novelGene_27030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	71069151	71068979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71069000_71069200
ES.33167.1	chr8	-	424	1	Intergenic	novelGene_27031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGAGCTTCTCTCTTA	5313	False	NA	NA	False	NA	NA	NA	71080447	71080023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71080000_71080400
ES.33168.1	chr8	+	4030	3	Intergenic	novelGene_27032	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	71085432	71094078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71085460_71085562_71085710_71090222
ES.33168.2	chr8	+	173	1	Intergenic	novelGene_27033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71088690	71088863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71088700_71088900
ES.33169.1	chr8	-	2655	2	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-149	0	intron_retention	FALSE	canonical	3	77	junction_1	0	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	505	False	NA	-6	True	AATAAA	-18	NA	71085255	71082042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71084242_71084799
ES.33169.10	chr8	-	1946	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-149	0	intron_retention	FALSE	canonical	1	3	junction_2	152.5	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	505	False	NA	-7	True	AATAAA	-17	NA	71085255	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71085030_71085137
ES.33169.12	chr8	-	1436	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	128.073763468124	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	486	False	NA	-7	True	AATAAA	-17	NA	71085274	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085141
ES.33169.13	chr8	-	1418	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	121.491654948899	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	486	False	NA	-7	True	AATAAA	-17	NA	71085274	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085159
ES.33169.15	chr8	-	1128	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.1697859401626	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	481	False	NA	-7	True	AATAAA	-17	NA	71085279	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082770_71084136_71084275_71084799_71085030_71085245
ES.33169.16	chr8	-	1734	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-151	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	137.254831932755	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCGTCTCAGTGACCT	503	False	NA	-8	True	AATAAA	-16	NA	71085257	71082044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084609_71084799_71085030_71085159
ES.33169.19	chr8	-	1357	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-195	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	127.146459731375	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGGCGTCTCAGTGACC	459	False	NA	-9	True	AATAAA	-15	NA	71085301	71082045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084275_71084799_71085030_71085245
ES.33169.2	chr8	-	1931	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-156	0	intron_retention	FALSE	canonical	3	33	junction_2	137.5	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	498	False	NA	-7	True	AATAAA	-17	NA	71085262	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71085030_71085159
ES.33169.4	chr8	-	1353	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-179	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	142.007824510561	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	475	False	NA	-7	True	AATAAA	-17	NA	71085285	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084285_71084799_71085030_71085245
ES.33169.5	chr8	-	2987	1	NIC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	76	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	730	False	NA	-7	True	AATAAA	-17	NA	71085030	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71082000_71085000
ES.33169.7	chr8	-	1988	3	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-6418	0	intron_retention	FALSE	canonical	3	16	junction_2	146	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	NA	False	NA	-7	True	AATAAA	-17	NA	71091524	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71085030_71091364
ES.33169.8	chr8	-	1522	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-6510	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	125.762562880303	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	NA	False	NA	-7	True	AATAAA	-17	NA	71091616	71082043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71091364
ES.3317.1	chr10	+	164	1	Intergenic	novelGene_2574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTTTTGAGACC	176	False	NA	NA	False	NA	NA	NA	80145616	80145780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80145600_80145800
ES.33170.1	chr8	+	542	2	Antisense	novelGene_ENSMUSG00000056204.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGCTGGAAAATGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	71102194	71104147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_71102367_71103777
ES.33171.1	chr8	-	5017	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	-134	0	-134	0	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112522	71099084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ES.33171.10	chr8	-	1600	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	-153	3436	-153	307	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTTGTTTGTTTT	NA	False	NA	-2	True	NA	NA	NA	71112541	71102520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ES.33171.11	chr8	-	1542	6	NNC	ENSMUSG00000056204.9	novel	720	6	NA	NA	3	305	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	83.9523674472614	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTGTTTGTT	NA	False	NA	-4	True	NA	NA	NA	71112315	71102522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71108297_71108468_71110077_71110131_71112259
ES.33171.12	chr8	-	1349	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-7	300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3135816492387	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTATTTGTTGTTTGT	NA	False	NA	-9	True	NA	NA	NA	71112395	71102527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71103436_71103835_71104058_71105141_71105172_71110077_71110131_71112259
ES.33171.13	chr8	-	5236	3	ISM	ENSMUSG00000056204.9	ENSMUST00000211526.2	805	4	-1124	-593	935	296	intron_retention	FALSE	canonical	3	150	junction_1	21	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGAGGGTATTTGTTGT	NA	False	NA	-13	True	NA	NA	NA	71109153	71102531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71103436_71103831_71104065_71105054
ES.33171.14	chr8	-	1661	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	-53	293	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTAGAGGGTATTTGT	NA	False	NA	-16	True	NA	NA	NA	71113091	71102534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
ES.33171.15	chr8	-	2877	5	FSM	ENSMUSG00000056204.9	ENSMUST00000210459.2	739	5	-1439	-699	37	292	multi-exon	FALSE	canonical	0	0	junction_4	84.1616747694579	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTAGAGGGTATTTG	NA	False	NA	-17	True	NA	NA	NA	71113001	71102535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71111427
ES.33171.16	chr8	-	977	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	20	3886	20	-143	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATGTCTTAAACCCTA	NA	False	NA	NA	False	CATAAA	-14	NA	71112368	71102970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ES.33171.2	chr8	-	4837	5	NIC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	81.2603839518372	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71113033	71099084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112950
ES.33171.3	chr8	-	4733	4	FSM	ENSMUSG00000056204.9	ENSMUST00000209768.2	381	4	-37	-4315	33	0	multi-exon	FALSE	canonical	1	1	junction_2	77.1016644870049	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112355	71099084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71110077_71110131_71112259
ES.33171.4	chr8	-	4901	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	75.8299907688244	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCATCCAGTGTCAC	NA	False	NA	-7	True	AATAAA	-16	NA	71112357	71099086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110026_71110131_71112259
ES.33171.5	chr8	-	4993	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	62	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCATCCAGTGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	71112976	71099087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
ES.33171.6	chr8	-	2239	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	2	2642	2	1101	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGAGTGGTTGGCTCT	NA	False	NA	-7	True	NA	NA	NA	71112386	71101726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ES.33171.7	chr8	-	2150	5	NIC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	22	1073	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	81.2603839518372	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAAGCTTATTTGTCG	NA	False	NA	-35	True	NA	NA	NA	71113016	71101754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112950
ES.33171.8	chr8	-	4820	3	ISM	ENSMUSG00000056204.9	ENSMUST00000211526.2	805	4	10	-1311	10	1014	intron_retention	FALSE	canonical	3	150	junction_1	21	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTAGTGTTCCTTGTT	NA	False	NA	-94	True	NA	NA	NA	71108019	71101813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71103436_71103831_71104065_71105054
ES.33171.9	chr8	-	2062	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	33	2788	33	955	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGGCCTACTCAGTGCA	NA	False	NA	NA	False	NA	NA	NA	71112355	71101872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ES.33172.1	chr8	-	178	1	Intergenic	novelGene_27034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAACCAACAA	NA	False	NA	NA	False	NA	NA	NA	71120620	71120442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71120400_71120600
ES.33173.1	chr8	-	178	1	Intergenic	novelGene_27035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAGTGA	NA	False	NA	NA	False	NA	NA	NA	71122191	71122013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71122000_71122200
ES.33174.1	chr8	+	973	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	-31	-17	-31	17	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCCTGAGCATGTTGT	NA	False	NA	37	True	AATAAA	-37	NA	71125866	71131419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ES.33174.11	chr8	+	719	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-1	-22	combination_of_known_splicesites	FALSE	canonical	3	158	junction_1	1562.13237453026	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126033	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126108_71130427_71130527_71130603_71130785_71131009
ES.33174.12	chr8	+	1358	5	NNC	ENSMUSG00000031848.16	novel	575	5	NA	NA	0	-23	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1440.21324375941	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATAAAAGCAAACACC	NA	False	NA	-9	True	NA	NA	NA	71126034	71131373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126108_71129204_71129247_71129828_71130527_71130603_71130785_71131009
ES.33174.13	chr8	+	5340	1	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	-22	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126034	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126000_71131400
ES.33174.14	chr8	+	5291	2	FSM	ENSMUSG00000031848.16	ENSMUST00000153689.2	375	2	-4279	-637	1	1	multi-exon	FALSE	canonical	3	3671	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCTTCTGCCTAA	NA	False	NA	21	True	AATAAA	-21	NA	71126035	71131403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71130527_71130603
ES.33174.15	chr8	+	5053	3	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	11	-2	intron_retention	FALSE	canonical	3	3228	junction_2	221.5	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCAGCTGTTCTTCTGCC	NA	False	NA	18	True	AATAAA	-18	NA	71126045	71131400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71130527_71130603_71130785_71131009
ES.33174.16	chr8	+	843	6	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	19	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1737.77876612646	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126053	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126108_71129021_71129124_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ES.33174.18	chr8	+	715	5	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-23	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1520.87063881186	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126058	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130764_71131009
ES.33174.19	chr8	+	804	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-14	-22	intron_retention	FALSE	canonical	3	2963	junction_1	305.690838738895	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126067	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126108_71129204_71129247_71130427_71130785_71131009
ES.33174.2	chr8	+	5284	2	NIC	ENSMUSG00000031848.16	novel	636	4	NA	NA	5	9	intron_retention	FALSE	canonical	3	3228	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTAAGCCCTGAG	NA	False	NA	29	True	AATAAA	-29	NA	71125902	71131411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71130785_71131009
ES.33174.20	chr8	+	1397	4	NNC	ENSMUSG00000031848.16	novel	636	4	NA	NA	-8	-22	intron_retention	FALSE	canonical	3	13	junction_2	1457.12616703794	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126073	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126108_71129204_71129247_71129828_71130785_71131009
ES.33174.21	chr8	+	3732	5	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	-3	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1541.56809369551	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126078	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71129124_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ES.33174.22	chr8	+	752	5	NNC	ENSMUSG00000031848.16	novel	375	2	NA	NA	286	-22	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1540.7085017939	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126367	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126433_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ES.33174.23	chr8	+	1518	5	NNC	ENSMUSG00000031848.16	novel	375	2	NA	NA	-2105	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	1536.41065067253	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGAGCCAGCTGTTC	NA	False	NA	11	True	AATAAA	-11	NA	71128209	71131393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71129022_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ES.33174.4	chr8	+	1469	5	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_2	1428.27892496529	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTGTTCTTCTGCCT	NA	False	NA	19	True	AATAAA	-19	NA	71126028	71131401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71126108_71129204_71129923_71130427_71130527_71130603_71130785_71131009
ES.33174.5	chr8	+	746	5	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	2	-22	combination_of_known_junctions	FALSE	canonical	3	230	junction_3	1354.46250870964	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126030	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126108_71129204_71129247_71130427_71130509_71130603_71130785_71131009
ES.33174.6	chr8	+	1945	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	2	-22	intron_retention	FALSE	canonical	3	2963	junction_1	292.068865547532	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126030	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126108_71129204_71130527_71130603_71130785_71131009
ES.33174.7	chr8	+	665	4	FSM	ENSMUSG00000031848.16	ENSMUST00000210987.2	636	4	-51	22	2	-22	multi-exon	FALSE	canonical	2	25	junction_2	1451.48498671763	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAGCAAACACCA	NA	False	NA	-8	True	NA	NA	NA	71126030	71131374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71126108_71129204_71129247_71130603_71130785_71131009
ES.33174.8	chr8	+	2047	3	NIC	ENSMUSG00000031848.16	novel	636	4	NA	NA	2	-3	intron_retention	FALSE	canonical	3	2963	junction_1	132.5	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCAGCTGTTCTTCTGC	NA	False	NA	17	True	AATAAA	-17	NA	71126030	71131399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126108_71129204_71130785_71131009
ES.33174.9	chr8	+	3630	1	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	2	-1106	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAGTAATGTCAA	NA	False	NA	NA	False	NA	NA	NA	71126030	71129660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71126000_71129700
ES.33175.1	chr8	+	4359	2	Intergenic	novelGene_27036	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	71135357	71139765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71138190_71138238
ES.33176.1	chr8	+	175	2	Intergenic	novelGene_27037	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1017	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	71147029	71334521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71147078_71334394
ES.33176.10	chr8	+	3132	15	NIC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	5980	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	1.66598625567009	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGGAGTGTGGCTAAG	NA	False	NA	NA	False	NA	NA	NA	71182693	71203835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ES.33176.11	chr8	+	4806	10	NNC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	5990	-1	intron_retention	FALSE	canonical	0	0	junction_6	1.82574185835055	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	71182703	71203823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71182934_71197922_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199555_71199868_71200030_71200115_71200629_71200705_71200815_71201016
ES.33176.12	chr8	+	3594	15	NNC	ENSMUSG00000031842.16	novel	2489	2	NA	NA	7119	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.02660870844444	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	71183832	71203822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71184548_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ES.33176.13	chr8	+	3465	14	ISM	ENSMUSG00000031842.16	ENSMUST00000224874.2	3099	15	78	-9	31	-2	intron_retention	FALSE	canonical	1	3	junction_6	1.46759877141069	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTGGAGTGTGGCTA	NA	False	NA	NA	False	NA	NA	NA	71195758	71203833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871
ES.33176.14	chr8	+	3029	15	FSM	ENSMUSG00000031842.16	ENSMUST00000224874.2	3099	15	81	-11	34	0	multi-exon	FALSE	canonical	1	2	junction_14	1.61150202466835	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGGAGTGTGGCTAAG	NA	False	NA	NA	False	NA	NA	NA	71195761	71203835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ES.33176.15	chr8	+	3214	10	NIC	ENSMUSG00000031842.16	novel	3099	15	NA	NA	-1889	-1	intron_retention	FALSE	canonical	1	2	junction_9	1.36986977843755	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	71198650	71203823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71202055_71202489
ES.33176.17	chr8	+	1413	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	21	8	-3	-8	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCCGCACCCTGCCC	NA	False	NA	80	True	ATTAAA	-11	NA	71207348	71211315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ES.33176.18	chr8	+	1363	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110090.8	1375	5	-21	33	0	-33	multi-exon	FALSE	canonical	1	2	junction_1	23.3492505233037	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCTGCTGGCCCAG	NA	False	NA	13	True	AATAAA	-13	NA	71207351	71211248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71207513_71208477_71208731_71209093_71209213_71209783_71209909_71210543
ES.33176.19	chr8	+	841	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	-49	217	-49	-217	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGTGTTTTTCTTC	2276	False	NA	42	True	ATTAAA	-43	NA	71229409	71230250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71229400_71230200
ES.33176.2	chr8	+	2081	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-410	-4	-410	4	mono-exon	FALSE	NA	NA	NA	NA	NA	869	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTCCGCCTCCTTCTTC	NA	False	NA	38	True	AGTAAA	-20	NA	71151188	71153269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71151200_71153300
ES.33176.20	chr8	+	891	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	67	51	67	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATTGATTCCTTTGG	2392	False	NA	NA	False	NA	NA	NA	71229525	71230416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71229500_71230400
ES.33176.21	chr8	+	3529	5	ISM	ENSMUSG00000000791.10	ENSMUST00000000808.8	2873	16	8400	-2114	3633	2114	3prime_fragment	FALSE	canonical	1	1	junction_3	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATCGGTGTTGTGCGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	71269492	71276182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71269684_71269855_71269991_71271968_71272066_71272325_71272408_71273158
ES.33176.22	chr8	+	1411	5	ISM	ENSMUSG00000000791.10	ENSMUST00000000808.8	2873	16	8401	3	3634	-3	3prime_fragment	FALSE	canonical	1	1	junction_3	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGCCGTCGTGGTGC	NA	False	NA	NA	False	AATAAA	-27	NA	71269493	71274065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71269684_71269855_71269991_71271968_71272066_71272325_71272408_71273158
ES.33176.23	chr8	+	3428	4	ISM	ENSMUSG00000000791.10	ENSMUST00000212657.2	2741	15	8372	-2117	3640	2117	3prime_fragment	FALSE	canonical	2	4	junction_3	2.05480466765633	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGGTGTTGTGCGGTGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	71269499	71276185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71269684_71269855_71269991_71272325_71272408_71273158
ES.33176.24	chr8	+	1058	3	Antisense	novelGene_ENSMUSG00000002908.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGAACTATCAGGAATC	NA	False	NA	NA	False	NA	NA	NA	71304901	71306110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_71305241_71305325_71305793_71305858
ES.33176.25	chr8	+	174	1	Intergenic	novelGene_27042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTGGGACA	NA	False	NA	NA	False	NA	NA	NA	71307015	71307189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71307000_71307200
ES.33176.26	chr8	+	1639	2	Antisense	novelGene_ENSMUSG00000007721.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71321390	71325219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_71322824_71325013
ES.33176.27	chr8	+	179	1	Intergenic	novelGene_27043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGTGGAAATAAGGG	2904	False	NA	NA	False	NA	NA	NA	71333631	71333810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71333600_71333800
ES.33176.28	chr8	+	178	1	Intergenic	novelGene_27044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	3616	False	NA	NA	False	NA	NA	NA	71334343	71334521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71334300_71334500
ES.33176.3	chr8	+	241	2	Genic_Genomic	ENSMUSG00000071076.9	novel	1667	1	NA	NA	-10	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTGTCCGCCTCCT	NA	False	NA	33	True	AGTAAA	-15	NA	71151588	71153264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_71151716_71153150
ES.33176.4	chr8	+	3419	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-10	-1742	-10	1742	mono-exon	FALSE	NA	NA	NA	NA	NA	869	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGATGTCTTACTGTA	NA	False	NA	NA	False	NA	NA	NA	71151588	71155007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71151600_71155000
ES.33176.5	chr8	+	1468	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	-6	205	-6	-205	mono-exon	FALSE	NA	NA	NA	NA	NA	868	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTTTCCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	71151592	71153060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71151600_71153100
ES.33176.6	chr8	+	1071	2	Genic_Genomic	ENSMUSG00000071076.9	novel	1667	1	NA	NA	124	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGCTGTCCGCCTCCT	NA	False	NA	33	True	AGTAAA	-15	NA	71151722	71153264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_71152480_71152950
ES.33176.7	chr8	+	686	1	ISM	ENSMUSG00000110622.2	ENSMUST00000212436.2	4584	4	13504	4	13504	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTCTGGTCATATATCT	NA	False	NA	NA	False	AATAAA	-13	NA	71169609	71170295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71169600_71170300
ES.33176.8	chr8	+	875	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	-7	-26	-7	26	multi-exon	FALSE	canonical	3	28	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGACTCTCGGGTTGA	NA	False	NA	NA	False	AGTAAA	-20	NA	71171184	71175309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71171282_71174425_71174587_71174692
ES.33176.9	chr8	+	3447	14	NIC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	5960	0	intron_retention	TRUE	canonical	1	2	junction_13	1.71660873880165	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGGAGTGTGGCTAAG	NA	False	NA	NA	False	NA	NA	NA	71182673	71203835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ES.33177.1	chr8	-	2216	2	FSM	ENSMUSG00000080058.3	ENSMUST00000211380.2	408	2	-390	-1418	1	1418	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCGGTTTCAGTTAT	NA	False	NA	NA	False	AATATA	-12	NA	71152728	71150392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71152145_71152264
ES.33177.2	chr8	-	1728	1	FSM	ENSMUSG00000080058.3	ENSMUST00000116172.2	543	1	283	-1468	-108	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCGGCCTACAGATCTC	NA	False	NA	NA	False	NA	NA	NA	71152446	71150718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71150700_71152400
ES.33178.1	chr8	-	174	1	Intergenic	novelGene_27038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAAAACAGG	NA	False	NA	NA	False	NA	NA	NA	71204570	71204396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71204400_71204600
ES.33179.1	chr8	-	1467	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	12	-499	12	499	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAAATAGGGTAGTCGG	NA	False	NA	NA	False	NA	NA	NA	71213580	71210795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ES.33179.10	chr8	-	932	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	299.937076734438	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213564	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211653_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ES.33179.11	chr8	-	1093	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	304.272082189609	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213580	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211754_71211884_71212036_71212241_71213013_71213185_71213365
ES.33179.12	chr8	-	1051	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213624	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
ES.33179.13	chr8	-	1173	6	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-34	-2	combination_of_known_junctions	FALSE	canonical	1	11	junction_3	339.379787259053	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213626	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211671_71211754_71211884_71212036_71212114_71212738_71212900_71213013_71213185_71213365
ES.33179.14	chr8	-	2030	3	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	708	junction_1	2.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213591	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211671_71211754_71213185_71213365
ES.33179.16	chr8	-	1014	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	303.839081587606	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213624	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213050_71213185_71213365
ES.33179.17	chr8	-	1755	5	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	9	-2	intron_retention	FALSE	canonical	3	27	junction_3	296.478076761166	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213583	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211671_71211754_71211884_71212036_71212900_71213013_71213185_71213365
ES.33179.18	chr8	-	2220	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-10	4	-10	-4	intron_retention	FALSE	canonical	3	708	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGACTGCGTGTGGGTG	NA	False	NA	-6	True	ATTAAA	-13	NA	71213602	71211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71211671_71211754
ES.33179.2	chr8	-	1387	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	15	381	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAGAGGGAGCAGCAGT	NA	False	NA	NA	False	AAAACA	-18	NA	71213577	71210913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
ES.33179.20	chr8	-	755	3	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	15	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	354.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGACTGCGTGTGGGTG	NA	False	NA	-6	True	ATTAAA	-13	NA	71213577	71211298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211671_71213013_71213185_71213365
ES.33179.21	chr8	-	1013	3	NIC	ENSMUSG00000035559.10	novel	308	3	NA	NA	12	-211	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	343	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAGGCTCACGCATTTA	NA	False	NA	NA	False	GGGGCT	-4	NA	71213580	71212272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71212900_71213013_71213185_71213365
ES.33179.3	chr8	-	2135	2	NIC	ENSMUSG00000035559.10	novel	692	4	NA	NA	12	2	intron_retention	FALSE	canonical	3	714	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCGTGTGGGTGGGTTCA	NA	False	NA	0	True	ATTAAA	-19	NA	71213580	71211292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211884_71212036
ES.33179.4	chr8	-	1041	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	-63	2	-63	-2	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213655	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ES.33179.5	chr8	-	959	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	300.799767287144	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213580	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211761_71211884_71212036_71212114_71213013_71213185_71213365
ES.33179.6	chr8	-	901	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_3	293.880077582677	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213552	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71211671_71211754_71211884_71212036_71212114_71213050_71213185_71213365
ES.33179.7	chr8	-	1831	4	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	17	-2	intron_retention	FALSE	canonical	3	27	junction_2	323.619461027231	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213575	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211884_71212036_71212900_71213013_71213185_71213365
ES.33179.8	chr8	-	1859	4	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	19	-2	intron_retention	FALSE	canonical	3	708	junction_1	2.62466929133727	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213573	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211671_71211754_71211884_71212036_71213185_71213365
ES.33179.9	chr8	-	1029	4	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	649	junction_2	30.408332191468	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACTGCGTGTGGGTGGG	NA	False	NA	-4	True	ATTAAA	-15	NA	71213559	71211296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71211884_71212036_71212114_71213013_71213185_71213365
ES.3318.1	chr10	-	1684	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	-7	-28	-7	28	multi-exon	FALSE	canonical	3	349	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAATCAGAAGCCAGG	8710	False	NA	NA	False	ATTAAA	-7	NA	80156378	80154059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80155382_80156016
ES.3318.2	chr10	-	1415	2	NNC	ENSMUSG00000020133.9	novel	1649	2	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGATGGAGTGGCTCGCT	8712	False	NA	NA	False	GATAAA	-13	NA	80156376	80154093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80155382_80156249
ES.3318.3	chr10	-	1219	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	-17	447	-17	-447	multi-exon	FALSE	canonical	3	349	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTTAAGCCAGGCTAGA	8700	False	NA	-9	True	ATTAAA	-25	NA	80156388	80154534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80155382_80156016
ES.3318.4	chr10	-	947	2	NNC	ENSMUSG00000020133.9	novel	1649	2	NA	NA	13	-456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTTCTCCCTTAAGC	8730	False	NA	-18	True	ATTAAA	-16	NA	80156358	80154543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80155382_80156249
ES.3318.5	chr10	-	683	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	13	953	13	-953	multi-exon	FALSE	canonical	3	349	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTAATGGCCTCTAAT	8730	False	NA	NA	False	NA	NA	NA	80156358	80155040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80155382_80156016
ES.33180.1	chr8	-	6499	23	Fusion	ENSMUSG00000031834.16_ENSMUSG00000031838.11	novel	3165	16	NA	NA	2	13	intron_retention	TRUE	non_canonical	0	0	junction_7	56.3389975472416	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGGAGTTTGTGTTTT	NA	False	NA	-2	True	AATAAA	-31	NA	71229355	71215405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152_71219595_71220598_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71227997_71229250
ES.33180.11	chr8	-	3116	16	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	44.9442123328713	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229284	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221904_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.13	chr8	-	3453	14	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	127	junction_13	21.6849414661542	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229340	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.14	chr8	-	4192	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-572	-3	intron_retention	FALSE	canonical	3	127	junction_14	21.8614608246511	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229929	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.15	chr8	-	3075	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	48.0344795380339	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229356	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.16	chr8	-	3736	14	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	10	-3	intron_retention	FALSE	canonical	3	127	junction_13	21.7791496837398	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229347	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.17	chr8	-	3263	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	7	-3	intron_retention	FALSE	canonical	3	127	junction_14	21.0558053461631	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229350	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.19	chr8	-	3430	16	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_14	60.258185243906	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229353	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71228491_71228656_71229250
ES.33180.2	chr8	-	6177	10	Fusion	ENSMUSG00000031834.16_ENSMUSG00000031838.11	novel	980	7	NA	NA	-1421	0	intron_retention	FALSE	canonical	3	151	junction_9	25.8404410771513	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTCCTAGAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	71223729	71215418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490
ES.33180.20	chr8	-	4965	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	-549	3	-549	-3	intron_retention	FALSE	canonical	3	135	junction_8	20.0550263433548	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229906	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
ES.33180.22	chr8	-	3278	17	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-17	-3	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_15	55.5444290073271	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGTGTCTTTGGGGAC	NA	False	NA	-11	True	NA	NA	NA	71229340	71220822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225598_71227299_71227997_71229250
ES.33180.23	chr8	-	3378	14	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-17	-4	intron_retention	FALSE	canonical	3	127	junction_13	20.8497016566568	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTGTCTTTGGGGA	NA	False	NA	-12	True	NA	NA	NA	71229340	71220823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.24	chr8	-	3538	13	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	127	junction_12	22.4541198892319	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTGTCTTTGGGGA	NA	False	NA	-12	True	NA	NA	NA	71229339	71220823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.25	chr8	-	3447	18	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-15	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	71.6535783762238	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGTGTCTTTGGGGA	NA	False	NA	-12	True	NA	NA	NA	71229338	71220823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225561_71227299_71227997_71228491_71228701_71229250
ES.33180.26	chr8	-	3244	17	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	12	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	55.5444290073271	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTGTCTTTGGGG	NA	False	NA	-13	True	NA	NA	NA	71229345	71220824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464_71225561_71227299_71227997_71229250
ES.33180.27	chr8	-	5103	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	127	junction_14	22.3215142855497	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTGTCTTTGGGG	NA	False	NA	-13	True	NA	NA	NA	71229340	71220824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71227997_71229250
ES.33180.3	chr8	-	5630	22	Fusion	ENSMUSG00000031834.16_ENSMUSG00000031838.11	novel	3165	16	NA	NA	-7	0	multi-exon	FALSE	canonical	3	127	junction_21	28.9273074385823	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTCCTAGAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	71229330	71215418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.30	chr8	-	3809	13	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_2	48.7544869729956	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTGTCTTTGGGG	NA	False	NA	-13	True	NA	NA	NA	71229355	71220824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221987_71222064_71222232_71222410_71222548_71222692_71223020_71223409_71223490_71223807_71223932_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.31	chr8	-	3383	17	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.9715013810935	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTGTCTTTGGGG	NA	False	NA	-13	True	NA	NA	NA	71229358	71220824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222689_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71228430_71228656_71229250
ES.33180.34	chr8	-	6385	14	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	10	-9	intron_retention	FALSE	canonical	0	0	junction_8	49.0187743286834	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGCTGAGTGTCTTT	NA	False	NA	-17	True	NA	NA	NA	71229347	71220828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223585_71223667_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246
ES.33180.35	chr8	-	2583	16	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	36	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	60.285837658792	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGGCTGAGTGTCTT	NA	False	NA	-18	True	NA	NA	NA	71229287	71220829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223585_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227796_71227997_71229250
ES.33180.36	chr8	-	7156	11	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	3	-12	intron_retention	FALSE	canonical	3	16	junction_10	49.417507019274	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGTTGGCTGAGTGTC	NA	False	NA	-20	True	NA	NA	NA	71229354	71220831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221877_71221991_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71225464
ES.33180.37	chr8	-	4010	11	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-502	-14	intron_retention	FALSE	canonical	3	151	junction_7	15.4405310789493	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTGGCTGAGTG	NA	False	NA	-22	True	NA	NA	NA	71226310	71220833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71224676_71224776_71224909_71224995_71225047_71225246
ES.33180.38	chr8	-	2951	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	70	144	36	141	multi-exon	FALSE	canonical	3	127	junction_15	21.8259784049498	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGCAATCGCCTCCC	NA	False	NA	NA	False	AATACA	-37	NA	71229287	71220963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.39	chr8	-	3498	1	Genic_Genomic	ENSMUSG00000031834.16	novel	NA	NA	NA	NA	-2	-844	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTCTGGCAATTTTCT	NA	False	NA	NA	False	AAAAAG	-4	NA	71229359	71225861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_71225900_71229400
ES.33180.4	chr8	-	5074	7	Fusion	ENSMUSG00000031834.16_ENSMUSG00000031838.11	novel	980	7	NA	NA	-80	-2	intron_retention	FALSE	canonical	3	197	junction_6	15.8157797433098	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTTTTTCCTAGAGT	NA	False	NA	-17	True	AATAAA	-16	NA	71222112	71215420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71221877_71221991
ES.33180.5	chr8	-	3280	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	-68	-47	-68	47	multi-exon	FALSE	canonical	3	127	junction_15	21.8259784049498	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTCCTGCCAGTGGC	NA	False	NA	39	True	NA	NA	NA	71229425	71220772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.6	chr8	-	6325	14	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	54	0	20	0	intron_retention	FALSE	canonical	3	135	junction_8	20.3417546501899	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	False	NA	-8	True	NA	NA	NA	71229303	71220819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246
ES.33180.7	chr8	-	3209	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	127	junction_14	21.1819137328938	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCTTTGGGGACTG	NA	False	NA	-9	True	NA	NA	NA	71229321	71220820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33180.8	chr8	-	7217	9	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	15	-2	intron_retention	FALSE	canonical	3	154	junction_6	13.4483967445938	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGTCTTTGGGGACT	NA	False	NA	-10	True	NA	NA	NA	71229342	71220821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71224676_71224776_71224909_71224995_71225047_71225246
ES.33180.9	chr8	-	3138	16	NNC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	46.4756088956586	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGTCTTTGGGGACT	NA	False	NA	-10	True	NA	NA	NA	71229339	71220821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222685_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ES.33181.1	chr8	-	5281	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-4	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	15.8935070556971	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGTGCATTTGTGA	NA	False	NA	1	True	AATAAA	-21	NA	71257633	71230759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249432_71252101_71252134_71257586
ES.33181.11	chr8	-	5349	27	FSM	ENSMUSG00000031833.11	ENSMUST00000166004.3	5305	27	-45	1	-45	-1	multi-exon	FALSE	canonical	1	1	junction_26	15.3892300771307	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71249677	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71249543
ES.33181.12	chr8	-	5313	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	16.0049717926977	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257632	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71252236_71252347_71257586
ES.33181.15	chr8	-	5358	26	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	24	junction_25	10.5425613586073	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257650	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.16	chr8	-	5315	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	13.4180065363035	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257666	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232838_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.18	chr8	-	5348	29	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	31	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_27	17.7865389940751	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGTGTGTGCATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	71257667	71230762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71249356_71249447_71252101_71252134_71257586
ES.33181.19	chr8	-	5429	25	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	14	junction_24	10.8230720633695	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGTGTGTGCATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	71245098	71230762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.2	chr8	-	5394	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_25	16.0127999835634	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71257631	71230760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71252101_71252134_71257586
ES.33181.20	chr8	-	5119	27	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	13.9510980246959	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGTGTGTGCATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	71257654	71230762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240879_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.21	chr8	-	5576	25	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	19.1701083866408	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGTGTGTGCATTTG	NA	False	NA	-2	True	AATAAA	-18	NA	71245070	71230762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233188_71233321_71233512_71233636_71233791_71234369_71234543_71234786_71236108_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242562_71242640_71242730_71244869
ES.33181.22	chr8	-	5229	27	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	14.0828591939607	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257644	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241945_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.23	chr8	-	5252	28	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_24	13.9278958417586	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257662	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.24	chr8	-	5735	25	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	4	-3	intron_retention	FALSE	canonical	3	24	junction_24	10.012145402238	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257622	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71238138_71238800_71238940_71239213_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.25	chr8	-	5981	24	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-26	-3	intron_retention	FALSE	canonical	2	5	junction_1	16.1695880145273	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257655	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232838_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242562_71242640_71242730_71252101_71252134_71257586
ES.33181.26	chr8	-	5299	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	13	junction_24	14.1891282659205	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257633	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242730_71252101_71252134_71257586
ES.33181.27	chr8	-	5442	25	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-5	-3	intron_retention	FALSE	canonical	1	2	junction_13	14.3321220418409	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71245086	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238164_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242730_71244869
ES.33181.28	chr8	-	5170	26	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	12.6911622793186	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71257633	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71257586
ES.33181.3	chr8	-	5364	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_24	14.3250515039813	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71245086	71230760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71244869
ES.33181.31	chr8	-	5303	26	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	12.6911622793186	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGGTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-17	NA	71245074	71230763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244894
ES.33181.33	chr8	-	5406	26	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	13.7877626901539	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATACTGGTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-16	NA	71245075	71230764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232838_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.34	chr8	-	6007	24	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	14	junction_23	10.730765973326	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATACTGGTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-15	NA	71245087	71230765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.35	chr8	-	5368	28	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-50	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_27	19.2533466707659	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATACTGGTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-15	NA	71249682	71230765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242562_71242640_71242730_71249356_71249447_71249543
ES.33181.36	chr8	-	7043	23	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	24	junction_22	10.3237870237814	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATACTGGTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-15	NA	71257643	71230765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.37	chr8	-	5095	26	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.9162643630324	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATACTGGTGTGTGCA	NA	False	NA	-6	True	AATAAA	-14	NA	71257637	71230766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233487_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.38	chr8	-	5149	26	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	27	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	17.8255546898266	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATACTGGTGTGTGCA	NA	False	NA	-6	True	AATAAA	-14	NA	71249605	71230766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71249543
ES.33181.39	chr8	-	5870	25	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	4	-6	intron_retention	FALSE	canonical	2	5	junction_1	16.6230679746216	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATACTGGTGTGTGCA	NA	False	NA	-6	True	AATAAA	-14	NA	71245077	71230766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232838_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242562_71242640_71242730_71244869
ES.33181.4	chr8	-	8097	20	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	3	0	intron_retention	FALSE	canonical	3	24	junction_19	10.8242059710192	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71257623	71230760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233636_71233791_71234369_71234543_71236243_71236343_71236910_71237157_71237260_71237371_71238138_71238800_71238940_71239213_71239423_71239499_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.41	chr8	-	5305	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	19.5343600061655	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATACTGGTGTGTGCA	NA	False	NA	-6	True	AATAAA	-14	NA	71257673	71230766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238164_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241827_71241929_71242326_71242348_71242491_71242562_71242640_71242730_71252101_71252134_71257586
ES.33181.42	chr8	-	4461	19	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	2798	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.5725092105429	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGATACTGGTGTGTGC	NA	False	NA	-7	True	AATAAA	-13	NA	71240624	71230767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236259_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511
ES.33181.43	chr8	-	5902	25	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-16	-8	intron_retention	FALSE	canonical	0	0	junction_9	15.914648650431	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGATACTGGTGTGTG	NA	False	NA	-8	True	AATAAA	-12	NA	71245097	71230768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236856_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244592
ES.33181.44	chr8	-	4581	18	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	2782	-8	intron_retention	FALSE	canonical	1	1	junction_8	14.6483580808112	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGATACTGGTGTGTG	NA	False	NA	-8	True	AATAAA	-12	NA	71240640	71230768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236474_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511
ES.33181.45	chr8	-	6454	24	NIC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	5	-9	intron_retention	FALSE	canonical	3	14	junction_23	10.82512655073	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGATACTGGTGTGT	NA	False	NA	-9	True	AATAAA	-11	NA	71245076	71230769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.46	chr8	-	5248	27	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-32	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	13.6457722607303	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATCTGATACTGGTGT	NA	False	NA	-11	True	AATAAA	-9	NA	71257661	71230771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238164_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.47	chr8	-	4220	28	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-7	78	combination_of_known_junctions	FALSE	canonical	3	13	junction_24	13.9278958417586	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTCTAGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	71257636	71231769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.48	chr8	-	4196	26	FSM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	24	31	9	-31	multi-exon	FALSE	canonical	3	14	junction_25	10.6046027742674	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAGCCAGGCTGGCCCGC	NA	False	NA	NA	False	NA	NA	NA	71245057	71231878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.49	chr8	-	3480	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-4	-471	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	14.1298395908767	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAAGGAGTCATGGCTG	NA	False	NA	NA	False	NA	NA	NA	71257633	71232841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33181.5	chr8	-	6612	24	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_23	12.678815518374	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257633	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71257570
ES.33181.50	chr8	-	5994	2	ISM	ENSMUSG00000031833.11	ENSMUST00000212875.2	449	6	-16	4654	-13	-3699	5prime_fragment	FALSE	canonical	3	24	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGACTGGATATGGG	NA	False	NA	NA	False	NA	NA	NA	71257642	71246195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71252134_71257586
ES.33181.51	chr8	-	2001	1	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	17	-5118	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	71249615	71247614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71247600_71249600
ES.33181.6	chr8	-	4202	28	NNC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2829460965628	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257639	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71231160_71232162_71232582_71232916_71233099_71233183_71233319_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242562_71242640_71242730_71252101_71252134_71257586
ES.33181.7	chr8	-	5356	26	FSM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	-19	-1086	-19	-1	multi-exon	FALSE	canonical	3	14	junction_25	10.6046027742674	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71245100	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ES.33181.8	chr8	-	4547	19	NNC	ENSMUSG00000031833.11	novel	4251	26	NA	NA	2809	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	14.3973591542784	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71240613	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238245_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511
ES.33181.9	chr8	-	5237	27	NIC	ENSMUSG00000031833.11	novel	5305	27	NA	NA	32	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_26	10.3378576975671	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	71257666	71230761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71252101_71252134_71257586
ES.33182.1	chr8	-	164	1	Intergenic	novelGene_27039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATAAACCT	8558	False	NA	NA	False	NA	NA	NA	71264589	71264425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71264400_71264600
ES.33183.1	chr8	-	174	1	Intergenic	novelGene_27040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71280163	71279989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71280000_71280200
ES.33184.1	chr8	-	2335	8	FSM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	19	1	19	-1	multi-exon	FALSE	canonical	0	0	junction_5	35.6330504688314	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71292345	71287773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ES.33184.10	chr8	-	2146	6	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	303	-4	intron_retention	FALSE	canonical	0	0	junction_3	39.6867736153999	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACTGGGCCGTCTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	71291859	71287778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71289022_71289501_71289665_71289753_71290191_71291337_71291486_71291622_71291690_71291771
ES.33184.12	chr8	-	1716	8	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	305	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.4156025843175	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAAAATGGGAGG	NA	False	NA	-27	True	NA	NA	NA	71291857	71287798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71288636_71288863_71288938_71289501_71289646_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ES.33184.2	chr8	-	1805	8	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	328	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.5031528348824	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71291834	71287773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71288639_71288863_71289022_71289501_71289646_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ES.33184.3	chr8	-	2021	7	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	35.6732859901262	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71292179	71287773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291622_71291690_71291771
ES.33184.4	chr8	-	2119	8	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.6330504688314	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71292177	71287773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291385_71291486_71291622_71291690_71291771
ES.33184.5	chr8	-	2818	5	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_3	44.7520949230313	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCGTCTTTTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	71292177	71287773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71288639_71288863_71290011_71290087_71290191_71291337_71291486_71291622
ES.33184.6	chr8	-	2065	8	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.7195341511277	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGGCCGTCTTTTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	71292176	71287775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71289912_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ES.33184.8	chr8	-	1669	6	NNC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	328	-4	intron_retention	FALSE	canonical	1	2	junction_2	46.6321777316908	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACTGGGCCGTCTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	71291834	71287778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71288639_71288863_71288938_71289501_71289665_71289753_71290011_71290087_71290191_71291622
ES.33184.9	chr8	-	2253	7	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_4	38.4476556141232	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACTGGGCCGTCTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	71292179	71287778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71288639_71288863_71289022_71289501_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ES.33185.1	chr8	-	172	1	Intergenic	novelGene_27041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGTTTAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	71293356	71293184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71293200_71293400
ES.33186.1	chr8	-	3713	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-451	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	5.77350269189626	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGATTCTGGTGAAACA	NA	False	NA	-6	True	AATAAA	-16	NA	71316353	71295806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.10	chr8	-	2891	9	NNC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.767427733679	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71309621	71295807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300814_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
ES.33186.12	chr8	-	3015	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-64	-7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	9.4097401598845	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGGATTCTGGTGAAA	NA	False	NA	-8	True	AATAAA	-14	NA	71315715	71295808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
ES.33186.14	chr8	-	2744	9	NIC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	46	-109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	9.57862203033401	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGCCTTTATTCCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	71309606	71295910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71309575
ES.33186.15	chr8	-	3255	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-99	-111	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	5.77350269189626	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACATGCCTTTATTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71316001	71295912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.17	chr8	-	2265	10	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.03627804948776	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAACTGGAGTAAGATAC	NA	False	NA	NA	False	NA	NA	NA	71315671	71296551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300839_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.18	chr8	-	2595	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-83	-7	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	5.77350269189626	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTATCTAACTGGAGTAA	NA	False	NA	NA	False	NA	NA	NA	71315985	71296556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.19	chr8	-	2120	9	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-3	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.67923034130297	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTTCAGGATCTATC	NA	False	NA	NA	False	NA	NA	NA	71315654	71296568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300839_71300947_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.20	chr8	-	2187	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-4	-27	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	9.4097401598845	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATGGCTTTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	71315655	71296576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
ES.33186.21	chr8	-	2440	10	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-115	-165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.4680584118346	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGTTGACATGCAGGG	NA	False	NA	NA	False	AGTAAA	-19	NA	71316017	71296714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300814_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
ES.33186.22	chr8	-	2403	10	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-46	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.03627804948776	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTTGACATGCAGG	NA	False	NA	NA	False	AGTAAA	-18	NA	71315948	71296715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300814_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.23	chr8	-	2277	3	NNC	ENSMUSG00000002908.18	novel	1608	8	NA	NA	-1052	3584	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACACTAACGCAGTACC	NA	False	NA	NA	False	NA	NA	NA	71306444	71304060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71305762_71305827_71306302_71306342
ES.33186.24	chr8	-	2699	5	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-83	3584	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	9.80752262296652	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACACTAACGCAGTACC	NA	False	NA	NA	False	NA	NA	NA	71315985	71304060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
ES.33186.25	chr8	-	1835	1	Genic_Genomic	ENSMUSG00000002908.18	novel	NA	NA	NA	NA	-142	-6565	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTAACTCGGCGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	71316044	71314209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_71314200_71316000
ES.33186.3	chr8	-	3564	9	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-438	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	8.55862138431185	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGATTCTGGTGAAACA	NA	False	NA	-6	True	AATAAA	-16	NA	71316340	71295806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.4	chr8	-	3556	11	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-748	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.93227063666713	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71316650	71295807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591_71316052_71316471
ES.33186.7	chr8	-	2959	10	NNC	ENSMUSG00000002908.18	novel	4045	10	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.3777977258966	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71309623	71295807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300814_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71308937_71309004_71309575
ES.33186.8	chr8	-	3351	10	NIC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-115	-6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	7.6610285226392	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71316017	71295807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71297206_71299138_71299209_71300843_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ES.33186.9	chr8	-	3235	9	NNC	ENSMUSG00000002908.18	novel	2528	11	NA	NA	-114	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6294108491487	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGATTCTGGTGAAAC	NA	False	NA	-7	True	AATAAA	-15	NA	71316016	71295807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71297206_71299138_71299209_71300814_71300947_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314341_71314418_71315591
ES.33187.1	chr8	-	915	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	442	-1	-110	1	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	71326137	71320869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ES.33187.2	chr8	-	4161	5	NNC	ENSMUSG00000007721.7	novel	1356	5	NA	NA	-77	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	247.720987201327	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCATGTCTGTATGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	71326104	71320871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71325238_71325340
ES.33187.3	chr8	-	997	4	NIC	ENSMUSG00000007721.7	novel	1356	5	NA	NA	-103	-1	intron_retention	FALSE	canonical	3	353	junction_3	94.5304183847718	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCATGTCTGTATGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	71326130	71320871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71321496_71321576_71321752_71322548_71322719_71326102
ES.33187.4	chr8	-	1147	5	NNC	ENSMUSG00000007721.7	novel	1356	5	NA	NA	-81	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	247.291326172189	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGGCCCATGTCTGTAT	NA	False	NA	-10	True	AATAAA	-13	NA	71326108	71320875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71325835
ES.33188.1	chr8	-	1477	4	ISM	ENSMUSG00000000792.3	ENSMUST00000000809.3	2928	15	4907	1	4907	-1	3prime_fragment	FALSE	canonical	0	0	junction_2	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGGCCTGTGGCGTA	NA	False	NA	NA	False	NA	NA	NA	71340494	71335533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71336613_71337564_71337681_71338673_71338799_71340337
ES.33188.2	chr8	-	2818	12	NNC	ENSMUSG00000000792.3	novel	2928	15	NA	NA	1491	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.50481321429517	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGGCCTGTGGCGTA	NA	False	NA	NA	False	NA	NA	NA	71343910	71335533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71336613_71337564_71337681_71338673_71338799_71339960_71340520_71340597_71340685_71341024_71341096_71341166_71341280_71341469_71341559_71341983_71342114_71342210_71342352_71342860_71343016_71343757
ES.33189.1	chr8	-	686	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	-80	654	-80	3	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGCTTCTATGTCC	NA	False	NA	-12	True	AATAAA	-18	NA	71350136	71348019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ES.33189.10	chr8	-	849	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-54	0	-40	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350096	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
ES.33189.11	chr8	-	900	3	NIC	ENSMUSG00000045128.10	novel	795	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	16397	junction_2	1536.5	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350055	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71348690_71348776_71348957_71350002
ES.33189.16	chr8	-	471	4	NIC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	14009.8312147815	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTTGTTTGCTTCTA	NA	False	NA	-17	True	AATAAA	-13	NA	71350056	71348024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71348152_71348243_71348354_71348776_71348957_71350002
ES.33189.2	chr8	-	1854	3	ISM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	-13	0	1	0	intron_retention	FALSE	canonical	3	19470	junction_2	7447.5	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350055	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71348152_71348243_71348690_71348776
ES.33189.3	chr8	-	988	2	NIC	ENSMUSG00000045128.10	novel	795	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	16397	junction_1	0	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71348957_71350002
ES.33189.4	chr8	-	1736	3	ISM	ENSMUSG00000045128.10	ENSMUST00000212129.2	578	5	-12	0	0	0	intron_retention	FALSE	canonical	3	32872	junction_2	746.5	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71348152_71348243_71348354_71348559
ES.33189.6	chr8	-	695	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212796.2	679	4	-16	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7152.95244403782	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71348354_71348559_71348690_71348776_71348957_71350002
ES.33189.7	chr8	-	889	3	NIC	ENSMUSG00000045128.10	novel	795	4	NA	NA	-5	0	intron_retention	FALSE	canonical	3	16397	junction_2	8984	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350049	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71348152_71348243_71348957_71350002
ES.33189.8	chr8	-	2036	1	FSM	ENSMUSG00000077563.3	ENSMUST00000104375.3	131	1	-1525	-380	-1525	380	mono-exon	FALSE	NA	NA	NA	NA	NA	1590	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350058	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71348000_71350100
ES.33189.9	chr8	-	648	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	56	-4	56	0	multi-exon	FALSE	canonical	3	7	junction_4	13791.0578727667	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71349871	71348022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349772
ES.3319.1	chr10	+	318	1	Intergenic	novelGene_2575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGTGCCAAGCCTCAAA	1316	False	NA	NA	False	NA	NA	NA	80160075	80160393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80160100_80160400
ES.33190.1	chr8	+	3278	8	NNC	ENSMUSG00000019261.4	novel	4396	4	NA	NA	-8329	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.095203762827	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACTGTCTTATTGCTG	4094	False	NA	20	True	AATAAA	-20	NA	71350246	71370178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71350325_71356288_71356364_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.10	chr8	+	3201	7	NNC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	107.092898405491	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTTGGTCTTACTGT	NA	False	NA	10	True	AATAAA	-10	NA	71358624	71370168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358711_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.11	chr8	+	4646	5	FSM	ENSMUSG00000019261.4	ENSMUST00000213083.2	4635	5	-12	1	-1	1	multi-exon	FALSE	canonical	3	269	junction_1	24.9499498997493	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358624	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71358772_71363588_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.12	chr8	+	3027	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	49	238	-1	-237	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTGCTTAAGTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	71358624	71369933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.13	chr8	+	3258	7	NNC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.464151783998	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358625	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358772_71363588_71363687_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.15	chr8	+	6477	3	ISM	ENSMUSG00000019261.4	ENSMUST00000213083.2	4635	5	-9	0	2	0	intron_retention	FALSE	canonical	3	269	junction_1	2	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358627	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71358772_71363588_71365298_71365549
ES.33190.16	chr8	+	3847	6	NIC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	2	1	intron_retention	FALSE	canonical	3	269	junction_1	22.3302485431757	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358627	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71363588_71363694_71364489_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.17	chr8	+	844	3	NIC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	161.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358627	71370171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71368994_71369219_71369695
ES.33190.18	chr8	+	1706	5	NNC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	128.482245855215	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358627	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358772_71363588_71363694_71366882_71367639_71368994_71369219_71369695
ES.33190.19	chr8	+	3516	6	NIC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	269	junction_1	21.5127868952398	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358627	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71367639_71368994_71369219_71369695
ES.33190.2	chr8	+	3442	8	NNC	ENSMUSG00000019261.4	novel	4396	4	NA	NA	-8297	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.095203762827	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	4126	False	NA	14	True	AATAAA	-14	NA	71350278	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71350527_71356288_71356364_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.20	chr8	+	5891	4	NIC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	269	junction_1	4.98887651569859	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358627	71370171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71363588_71364573_71365156_71365298_71365549
ES.33190.22	chr8	+	3699	8	NNC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.871613507152	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358627	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358772_71362612_71363049_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.23	chr8	+	5080	5	ISM	ENSMUSG00000019261.4	ENSMUST00000212227.2	3323	8	6	2	6	0	intron_retention	FALSE	canonical	3	269	junction_1	7.68114574786861	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358642	71370171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549
ES.33190.24	chr8	+	4599	6	NIC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	11	1	intron_retention	FALSE	canonical	3	269	junction_1	21.9052505121489	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358647	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71369219_71369695
ES.33190.25	chr8	+	5184	5	NIC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	269	junction_1	24.1389208540896	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358647	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71358772_71363588_71363694_71364489_71365298_71365549_71369219_71369695
ES.33190.27	chr8	+	1942	2	NNC	ENSMUSG00000019261.4	novel	719	5	NA	NA	3	402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTAAAAATACTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	71358890	71361200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71360736_71361103
ES.33190.28	chr8	+	2310	1	FSM	ENSMUSG00000019261.4	ENSMUST00000212823.2	1911	1	3	-402	3	402	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTAAAAATACTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	71358890	71361200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71358900_71361200
ES.33190.29	chr8	+	3366	7	NNC	ENSMUSG00000019261.4	novel	719	5	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.661220736108	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358908	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71359156_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.3	chr8	+	3367	7	NNC	ENSMUSG00000019261.4	novel	4396	4	NA	NA	-8297	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.661220736108	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	4126	False	NA	14	True	AATAAA	-14	NA	71350278	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71350527_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.30	chr8	+	5952	4	ISM	ENSMUSG00000019261.4	ENSMUST00000213083.2	4635	5	3500	0	-2325	0	3prime_fragment	FALSE	canonical	3	273	junction_1	26.1916017074176	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71362136	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.31	chr8	+	4146	6	ISM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	3987	-2	-1899	0	3prime_fragment	FALSE	canonical	3	273	junction_3	20.8173004974228	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71362562	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.4	chr8	+	3474	8	NNC	ENSMUSG00000019261.4	novel	4396	4	NA	NA	-8246	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.095203762827	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	4177	False	NA	14	True	AATAAA	-14	NA	71350329	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71350527_71351481_71351640_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.5	chr8	+	4092	7	NNC	ENSMUSG00000019261.4	novel	4396	4	NA	NA	-3185	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.661220736108	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	9238	False	NA	14	True	AATAAA	-14	NA	71355390	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71356364_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.6	chr8	+	3301	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	15	-2	15	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358590	71370173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33190.7	chr8	+	4527	7	NNC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	-9	1	intron_retention	FALSE	non_canonical	0	0	junction_5	109.32469478068	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTCTTACTGTCTTA	NA	False	NA	14	True	AATAAA	-14	NA	71358616	71370172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71368242_71368344_71369219_71369695
ES.33190.9	chr8	+	3871	8	NNC	ENSMUSG00000019261.4	novel	3314	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.095203762827	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358622	71370171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71358772_71362612_71363217_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ES.33191.1	chr8	-	2172	5	Antisense	novelGene_ENSMUSG00000019261.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGCCCCGCTGGCCACG	194	False	NA	NA	False	NA	NA	NA	71367242	71358621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_71358770_71363586_71363692_71364487_71364571_71365154_71365296_71365547
ES.33192.1	chr8	-	176	1	Intergenic	novelGene_27045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATACCA	5168	False	NA	NA	False	NA	NA	NA	71698365	71698189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71698200_71698400
ES.33193.1	chr8	-	2191	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	430	-608	-26	608	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGCAGGACCTAGATCG	568	False	NA	77	True	AATAAA	-29	NA	71725148	71703160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.10	chr8	-	1422	10	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	7746	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	158.408598095612	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	8460	False	NA	-9	True	NA	NA	NA	71717256	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71717137
ES.33193.11	chr8	-	1402	9	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	167.961119012705	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	570	False	NA	-9	True	NA	NA	NA	71725146	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.12	chr8	-	1654	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	151.666608058597	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	568	False	NA	-9	True	NA	NA	NA	71725148	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708428_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.13	chr8	-	4688	9	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	43	0	intron_retention	FALSE	canonical	3	458	junction_5	24.7761856426691	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	757	False	NA	-9	True	NA	NA	NA	71724959	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869
ES.33193.15	chr8	-	1637	12	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	191.822748760799	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	571	False	NA	-9	True	NA	NA	NA	71725145	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71710398_71710456_71715695_71715749_71721869_71721929_71724927
ES.33193.16	chr8	-	1523	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	153.13787864713	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	569	False	NA	-9	True	NA	NA	NA	71725147	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
ES.33193.17	chr8	-	2425	10	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	1931	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	136.33618578923	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	2645	False	NA	-9	True	NA	NA	NA	71723071	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869
ES.33193.18	chr8	-	1352	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	154.696676526663	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	733	False	NA	-9	True	NA	NA	NA	71724983	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.19	chr8	-	1501	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	129.85010589137	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	570	False	NA	-9	True	NA	NA	NA	71725146	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.20	chr8	-	4094	6	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_4	245.727816903174	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACAGTGTGATGCGTTT	729	False	NA	-10	True	NA	NA	NA	71724987	71703769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71711022_71715430_71715749_71724927
ES.33193.21	chr8	-	4464	9	ISM	ENSMUSG00000035439.14	ENSMUST00000123495.8	3987	10	-44	2566	-26	-2	intron_retention	FALSE	canonical	3	5	junction_5	204.791624279412	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	568	False	NA	-11	True	NA	NA	NA	71725148	71703770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71709102_71709196_71709999_71710070_71715695_71715749_71721869
ES.33193.22	chr8	-	1266	10	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	188.654364210856	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	744	False	NA	-11	True	NA	NA	NA	71724972	71703770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
ES.33193.23	chr8	-	4081	6	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-7797	-2	intron_retention	FALSE	canonical	3	477	junction_1	23.1464900146869	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	8622	False	NA	-11	True	NA	NA	NA	71717094	71703770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71710070_71715695
ES.33193.24	chr8	-	6508	8	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	14	-2	intron_retention	TRUE	canonical	0	0	junction_5	177.483543358998	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGTGTGATGCGTT	728	False	NA	-11	True	NA	NA	NA	71724988	71703770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71709199_71709999_71713044_71714296_71715749_71721869_71721929_71724927
ES.33193.26	chr8	-	1443	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	464	106	8	-106	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGGTTTGCTTTGGT	602	False	NA	-115	True	NA	NA	NA	71725114	71703874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.27	chr8	-	1414	1	Intergenic	novelGene_27046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCATTCCGTGTTACA	9532	False	NA	NA	False	AAGAAA	-19	NA	71712500	71711086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71711100_71712500
ES.33193.28	chr8	-	3945	1	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-24	-8331	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTACTCTTGCTTTGCT	570	False	NA	NA	False	NA	NA	NA	71725146	71721201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71721200_71725100
ES.33193.3	chr8	-	1615	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	407	-9	-49	9	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCGTTTGTTCTGCCCG	545	False	NA	0	True	NA	NA	NA	71725171	71703759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.4	chr8	-	1492	12	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	192.396757760348	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGATGCGTTTGTTC	730	False	NA	-6	True	NA	NA	NA	71724986	71703765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71723888_71723957_71724927
ES.33193.5	chr8	-	7100	6	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	40	1	intron_retention	FALSE	canonical	3	458	junction_3	28.5306852353742	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	754	False	NA	-8	True	NA	NA	NA	71724962	71703767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71705899_71707164_71707307_71708050_71708765_71709102_71710070_71715695_71715749_71721869
ES.33193.6	chr8	-	5130	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	150.018798822014	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	738	False	NA	-8	True	NA	NA	NA	71724978	71703767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71712928_71714837_71715749_71721869_71721929_71724927
ES.33193.7	chr8	-	1309	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	158.284631886226	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	729	False	NA	-9	True	NA	NA	NA	71724987	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ES.33193.8	chr8	-	4402	8	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	-25	0	intron_retention	FALSE	canonical	1	2	junction_4	178.838200731321	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	569	False	NA	-9	True	NA	NA	NA	71725147	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71709102_71709199_71709999_71710070_71715695_71715749_71721869
ES.33193.9	chr8	-	4581	10	ISM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	431	0	-25	0	intron_retention	FALSE	canonical	3	458	junction_6	25.5420254038006	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	569	False	NA	-9	True	NA	NA	NA	71725147	71703768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869
ES.33194.1	chr8	+	7318	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-45	0	intron_retention	TRUE	canonical	0	0	junction_1	38.6462913057602	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725312	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.10	chr8	+	2969	14	ISM	ENSMUSG00000004677.18	ENSMUST00000212935.2	6316	40	-6	24957	-6	-4044	5prime_fragment	FALSE	canonical	0	0	junction_1	31.1903869274876	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGGATACCTGGTAG	NA	False	NA	NA	False	NA	NA	NA	71725351	71787608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956
ES.33194.100	chr8	+	3820	20	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-304	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	53.3384115772535	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71801117	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71801553_71801585_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.101	chr8	+	3898	19	NNC	ENSMUSG00000004677.18	novel	3614	19	NA	NA	-285	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	50.342683703485	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGTGTGGTCTTGCTGC	NA	False	NA	11	True	AATAAA	-14	NA	71801136	71813352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71801557_71801589_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.103	chr8	+	4004	13	NIC	ENSMUSG00000004677.18	novel	3614	19	NA	NA	3710	0	intron_retention	FALSE	canonical	0	0	junction_12	43.5848470100434	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71805131	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.105	chr8	+	2278	8	ISM	ENSMUSG00000004677.18	ENSMUST00000168839.9	7102	39	82482	0	6459	0	intron_retention	FALSE	canonical	0	0	junction_7	69.419458543623	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71807880	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968
ES.33194.106	chr8	+	2111	9	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6980	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.9033383069477	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71808401	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811742_71811968_71812097_71812177
ES.33194.107	chr8	+	4916	1	Genic_Genomic	ENSMUSG00000004677.18	novel	NA	NA	NA	NA	10389	3369	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGACAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	71811810	71816726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_71811800_71816700
ES.33194.11	chr8	+	7257	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	44.0100485684804	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	NA	False	NA	12	True	AATAAA	-15	NA	71725352	71813353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776527_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.12	chr8	+	7346	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_1	43.5091864973903	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725352	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968_71812097_71812201
ES.33194.14	chr8	+	7686	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	44.1096361354296	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	NA	False	NA	12	True	AATAAA	-15	NA	71725353	71813353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71771239_71771439_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.15	chr8	+	7290	42	NNC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_1	44.3622533032753	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725355	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71789846_71789862_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.16	chr8	+	7143	39	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	44.30420057247	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	NA	False	NA	12	True	AATAAA	-15	NA	71725357	71813353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809039_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.2	chr8	+	7417	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_1	36.4906165603283	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725312	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.20	chr8	+	6915	41	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	1	326	intron_retention	FALSE	canonical	0	0	junction_1	37.541443765524	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTATTTGTATGTCTG	NA	False	NA	NA	False	NA	NA	NA	71725358	71812891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.21	chr8	+	7271	41	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_1	39.0837242340082	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725359	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.22	chr8	+	7268	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	37.9697446944676	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725359	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.23	chr8	+	7052	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	40.3530442324952	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725363	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812407
ES.33194.24	chr8	+	10762	41	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6	3386	intron_retention	FALSE	canonical	0	0	junction_1	37.541443765524	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGGATGTGTTTGA	NA	False	NA	NA	False	NA	NA	NA	71725363	71816743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.25	chr8	+	7834	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_1	43.941207508343	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725363	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789862_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812407
ES.33194.26	chr8	+	7166	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6	1	intron_retention	FALSE	non_canonical	0	0	junction_1	43.3962844031606	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725363	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809034_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812407
ES.33194.27	chr8	+	11172	39	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	-4	intron_retention	FALSE	canonical	0	0	junction_1	47.4884225575909	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTAGTGTGGTCTTGC	NA	False	NA	8	True	AATAAA	-11	NA	71725364	71813349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71747571_71747655_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.3	chr8	+	7419	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-30	0	intron_retention	TRUE	canonical	0	0	junction_1	38.8591818117718	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725327	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.30	chr8	+	7177	40	NIC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_1	43.3234399266066	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGTGTGGTCTTGCTGC	NA	False	NA	11	True	AATAAA	-14	NA	71725364	71813352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.34	chr8	+	7376	41	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_1	39.9279898692634	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725364	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.36	chr8	+	7023	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7	326	intron_retention	FALSE	canonical	0	0	junction_1	40.8648773221404	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTATTTGTATGTCTG	NA	False	NA	NA	False	NA	NA	NA	71725364	71812891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.4	chr8	+	7401	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-22	1	intron_retention	FALSE	canonical	0	0	junction_1	40.0805974709561	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71725335	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.40	chr8	+	6793	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	9	326	intron_retention	FALSE	canonical	0	0	junction_1	36.5294905766327	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTATTTGTATGTCTG	NA	False	NA	NA	False	NA	NA	NA	71725366	71812891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.41	chr8	+	7353	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_1	43.1430333847759	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725370	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.43	chr8	+	7003	39	NNC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	44.7196871133114	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725374	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968_71812097_71812407
ES.33194.44	chr8	+	7776	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	41.0179678215599	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725375	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811738_71811968
ES.33194.47	chr8	+	7472	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_1	39.6050189741419	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725376	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.49	chr8	+	7306	38	NNC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	44.6543089141675	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725377	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807469_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968
ES.33194.5	chr8	+	7496	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_1	44.238787827595	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725337	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793456_71795436_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.50	chr8	+	7142	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	40.1874961337029	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725382	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.52	chr8	+	6658	40	NIC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	-3	323	intron_retention	FALSE	canonical	0	0	junction_1	39.5443143095734	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTGTATTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	71725395	71812888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.54	chr8	+	7430	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_1	41.2339665809633	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTAGTGTGGTCTTGCT	NA	False	NA	9	True	AATAAA	-12	NA	71725399	71813350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776107_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.55	chr8	+	6758	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	1	324	intron_retention	FALSE	canonical	0	0	junction_1	41.9662367029875	275	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGTATTTGTATGTC	NA	False	NA	NA	False	NA	NA	NA	71725399	71812889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807469_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.56	chr8	+	7429	40	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	47.0004826027512	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGTGTGGTCTTGCTGC	NA	False	NA	11	True	AATAAA	-14	NA	71725399	71813352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774427_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793409_71793444_71795405_71795529_71796256_71796338_71796736_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.6	chr8	+	7177	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	39.5443143095734	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725344	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.60	chr8	+	5346	1	NIC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	6	-60902	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGATCTCACTGTCATAT	NA	False	NA	NA	False	NA	NA	NA	71725404	71730750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725400_71730800
ES.33194.61	chr8	+	7710	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	37.459128234499	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	NA	False	NA	12	True	AATAAA	-15	NA	71725406	71813353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.63	chr8	+	7308	41	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_1	42.0845577379637	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725408	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743142_71743270_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.66	chr8	+	7062	39	NIC	ENSMUSG00000004677.18	novel	7102	39	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_1	43.276793855675	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTAGTGTGGTCTTGCTG	NA	False	NA	10	True	AATAAA	-13	NA	71725409	71813351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968_71812097_71812307
ES.33194.67	chr8	+	4853	24	NNC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.2242020841752	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGTCTTGCTGCTTG	NA	False	NA	14	True	AATAAA	-17	NA	71725414	71813355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801343_71812205
ES.33194.68	chr8	+	7367	39	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	38	0	intron_retention	FALSE	canonical	0	0	junction_1	40.9236502814029	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725436	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.69	chr8	+	7271	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	17482	0	intron_retention	FALSE	canonical	0	0	junction_38	33.5922880226349	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	860	False	NA	16	True	AATAAA	-19	NA	71742880	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.70	chr8	+	6957	38	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	17628	1	intron_retention	FALSE	canonical	0	0	junction_36	37.0379348699444	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	1006	False	NA	13	True	AATAAA	-16	NA	71743026	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968_71812097_71812201
ES.33194.71	chr8	+	12113	30	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	17749	-2	intron_retention	FALSE	canonical	0	0	junction_12	42.9033424051817	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTAGTGTGGTCTTGCTG	1127	False	NA	10	True	AATAAA	-13	NA	71743147	71813351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71791550_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807157_71807956_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.72	chr8	+	6271	36	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-12036	1	intron_retention	FALSE	canonical	0	0	junction_7	41.575365547499	275	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71774424	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783354_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.76	chr8	+	5763	34	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-9896	-1	intron_retention	FALSE	canonical	0	0	junction_24	39.9377844895748	275	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTAGTGTGGTCTTGCTGC	NA	False	NA	11	True	AATAAA	-14	NA	71776564	71813352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807399_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.77	chr8	+	5999	33	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-7954	0	intron_retention	FALSE	canonical	0	0	junction_31	38.3084597176329	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71778506	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.79	chr8	+	5642	31	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-5848	0	intron_retention	FALSE	canonical	0	0	junction_21	41.9160536734502	275	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	16	False	NA	15	True	AATAAA	-18	NA	71780612	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807160_71807200_71807359_71807399_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.8	chr8	+	7493	40	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	39.4188219509078	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	NA	False	NA	15	True	AATAAA	-18	NA	71725350	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.81	chr8	+	178	1	Intergenic	novelGene_27047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTGAG	4760	False	NA	NA	False	NA	NA	NA	71785356	71785534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71785400_71785500
ES.33194.82	chr8	+	9086	26	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-192	0	intron_retention	FALSE	canonical	0	0	junction_25	39.2040814201787	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	5672	False	NA	15	True	AATAAA	-18	NA	71786268	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71786476_71786956_71787039_71789519_71789610_71791550_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.86	chr8	+	5082	28	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	493	0	intron_retention	FALSE	canonical	0	0	junction_26	43.1876309579961	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	6357	False	NA	15	True	AATAAA	-18	NA	71786953	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.87	chr8	+	4846	27	NIC	ENSMUSG00000004677.18	novel	3614	19	NA	NA	3102	1	intron_retention	FALSE	canonical	0	0	junction_25	46.1235798197041	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	310	False	NA	13	True	AATAAA	-16	NA	71789562	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.88	chr8	+	7929	25	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	3915	0	intron_retention	FALSE	canonical	0	0	junction_23	40.2735222847744	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	1123	False	NA	15	True	AATAAA	-18	NA	71790375	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71791665_71793403_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
ES.33194.89	chr8	+	6841	25	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	4886	0	intron_retention	FALSE	canonical	0	0	junction_23	34.9199232769298	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	2094	False	NA	15	True	AATAAA	-18	NA	71791346	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.9	chr8	+	7388	41	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_1	37.541443765524	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725351	71813357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.92	chr8	+	5574	26	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	6273	0	intron_retention	FALSE	canonical	0	0	junction_15	47.0500329436654	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	3481	False	NA	15	True	AATAAA	-18	NA	71792733	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807647_71807768_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.93	chr8	+	6583	23	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	7222	-2	intron_retention	FALSE	canonical	0	0	junction_21	35.864212462247	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTAGTGTGGTCTTGCTG	4430	False	NA	10	True	AATAAA	-13	NA	71793682	71813351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.94	chr8	+	6273	23	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-7246	0	intron_retention	FALSE	canonical	0	0	junction_21	35.668816392052	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	4923	False	NA	15	True	AATAAA	-18	NA	71794175	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811738_71811968_71812097_71812201
ES.33194.95	chr8	+	5310	24	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-6582	0	intron_retention	FALSE	canonical	0	0	junction_22	35.0793321816964	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGGTCTTGCTGCTTGG	5587	False	NA	15	True	AATAAA	-18	NA	71794839	71813356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.96	chr8	+	5221	23	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-6385	0	intron_retention	FALSE	canonical	0	0	junction_22	39.0875262806922	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGTGGTCTTGCTGCT	5784	False	NA	12	True	AATAAA	-15	NA	71795036	71813353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968
ES.33194.97	chr8	+	4309	24	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-6049	323	intron_retention	FALSE	canonical	0	0	junction_22	35.0793321816964	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTGTATTTGTATGT	6120	False	NA	NA	False	NA	NA	NA	71795372	71812888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33194.98	chr8	+	4348	18	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	-1151	1	intron_retention	FALSE	canonical	0	0	junction_17	47.7130262294514	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71800270	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968
ES.33194.99	chr8	+	4238	21	NNC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	-965	1	intron_retention	FALSE	canonical	0	0	junction_10	51.9887247391201	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGGTCTTGCTGCTT	NA	False	NA	13	True	AATAAA	-16	NA	71800456	71813354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71800575_71800974_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807634_71807768_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ES.33195.1	chr8	-	170	1	Intergenic	novelGene_27048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTTTGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	71797987	71797817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71797800_71798000
ES.33196.1	chr8	+	1050	8	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	331.893577730536	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819502	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
ES.33196.10	chr8	+	1558	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-7	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	428.785074367101	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	False	NA	14	True	AATAAA	-15	NA	71819578	71822368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819817_71820338_71820413_71820493_71820602_71820763_71821490_71821948_71822170
ES.33196.12	chr8	+	1302	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_4	360.267678261595	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819580	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820014_71820287_71820493_71820602_71820763_71821490_71821948_71822170
ES.33196.13	chr8	+	982	8	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	370.340769716603	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819580	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820773_71821493_71821522_71821772_71821948_71822170
ES.33196.14	chr8	+	1218	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	429.026525986448	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819857	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820174_71820338_71820413_71820493_71820602_71820763_71821490_71821948_71822170
ES.33196.15	chr8	+	1855	3	NIC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	851	junction_1	32	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819857	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71820756_71821193_71821948_71822170
ES.33196.16	chr8	+	1190	5	NIC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-2	0	intron_retention	FALSE	canonical	2	7	junction_2	358.33992242004	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819858	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71820493_71820602_71820756_71821493_71821522_71821775_71821948_71822170
ES.33196.17	chr8	+	1953	3	FSM	ENSMUSG00000002395.15	ENSMUST00000142685.8	754	3	-160	-1039	7	-5	multi-exon	FALSE	canonical	3	844	junction_1	3.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	False	NA	14	True	AATAAA	-15	NA	71819867	71822368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71820493_71820602_71820756_71821193
ES.33196.2	chr8	+	1566	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	23	0	intron_retention	FALSE	non_canonical	0	0	junction_4	390.75537104434	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819514	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820338_71820413_71820493_71820602_71820763_71821490_71821948_71822170
ES.33196.20	chr8	+	839	7	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.764954345378	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819867	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821485_71821522_71821775_71821948_71822170
ES.33196.21	chr8	+	1460	7	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	9	615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	374.795240394301	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	71819869	71822991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821772_71821948_71822170
ES.33196.22	chr8	+	983	7	NNC	ENSMUSG00000002395.15	novel	1000	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	396.546095120801	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819875	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820141_71820338_71820413_71820493_71820602_71820763_71821486_71821522_71821775_71821948_71822170
ES.33196.23	chr8	+	773	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	400.664647804121	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819885	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
ES.33196.24	chr8	+	3680	1	Genic_Genomic	ENSMUSG00000002395.15	novel	NA	NA	NA	NA	119	1450	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACCTTATTTTCCCAAT	NA	False	NA	NA	False	NA	NA	NA	71820146	71823826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_71820100_71823800
ES.33196.27	chr8	+	746	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	341.95344712402	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71820232	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820338_71820413_71820493_71820602_71820762_71821493_71821522_71821775_71821948_71822170
ES.33196.3	chr8	+	4140	2	FSM	ENSMUSG00000002395.15	ENSMUST00000127517.2	464	2	-747	-2929	46	1411	multi-exon	FALSE	canonical	3	844	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAAAAAAAAAGCAG	NA	False	NA	NA	False	AATACA	-27	NA	71819537	71823787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71820493_71820602
ES.33196.4	chr8	+	1143	6	NNC	ENSMUSG00000002395.15	novel	854	8	NA	NA	-34	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	342.602043192973	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCACATGTCTTCAGTG	NA	False	NA	18	True	AATAAA	-19	NA	71819551	71822372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821750_71821948_71822170
ES.33196.5	chr8	+	1059	8	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	365.528915073899	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819554	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819817_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490_71821522_71821775_71821948_71822170
ES.33196.6	chr8	+	1459	6	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-20	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	353.464227327179	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	False	NA	14	True	AATAAA	-15	NA	71819565	71822368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820763_71821490
ES.33196.7	chr8	+	1582	5	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	399.124902129647	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819574	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820493_71820602_71820763_71821490_71821948_71822170
ES.33196.8	chr8	+	976	8	NNC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	331.893577730536	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACATGTCTTCAGTGCT	NA	False	NA	20	True	AATAAA	-21	NA	71819575	71822374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821485_71821522_71821775_71821948_71822170
ES.33196.9	chr8	+	1871	5	NIC	ENSMUSG00000002395.15	novel	1064	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	188	junction_1	296.607906165699	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACATGTCTTCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	71819575	71822373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71819723_71819878_71820493_71820602_71820756_71821193_71821948_71822170
ES.33197.2	chr8	+	1263	3	ISM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-41	532	0	202	intron_retention	FALSE	canonical	3	42	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAGCTACCTAAA	NA	False	NA	12	True	AGTAAA	-17	NA	71823941	71825801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71824630_71825111_71825278_71825392
ES.33197.3	chr8	+	1844	1	NIC	ENSMUSG00000002396.9	novel	2179	3	NA	NA	12	198	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTGTGTGCAGCTACC	NA	False	NA	8	True	AGTAAA	-13	NA	71823953	71825797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71824000_71825800
ES.33197.4	chr8	+	1104	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-25	532	16	202	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAGCTACCTAAA	NA	False	NA	12	True	AGTAAA	-17	NA	71823957	71825801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
ES.33197.5	chr8	+	937	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	33	1209	-8	218	multi-exon	FALSE	canonical	3	32	junction_1	15.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCATCCCTTCATTTT	NA	False	NA	28	True	AGTAAA	-33	NA	71823974	71825817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71824630_71825392_71825447_71825589
ES.33197.7	chr8	+	722	3	NIC	ENSMUSG00000002396.9	novel	1611	4	NA	NA	465	202	intron_retention	FALSE	canonical	3	45	junction_1	9	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAGCTACCTAAA	NA	False	NA	12	True	AGTAAA	-17	NA	71824454	71825801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71824630_71825111_71825447_71825589
ES.33198.1	chr8	-	3365	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	-114	35	intron_retention	FALSE	canonical	3	125	junction_1	11	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCCAGGGTCTAGTCT	NA	False	NA	31	True	NA	NA	NA	71834718	71826731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71828918_71831032_71831128_71833634
ES.33198.10	chr8	-	2107	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	14	-2	intron_retention	FALSE	canonical	1	1	junction_2	64	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGGTCAGCCTCTGCT	NA	False	NA	-10	True	AATAAA	-10	NA	71834590	71826772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71827399_71828392_71828918_71833634
ES.33198.11	chr8	-	1965	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	12	241	12	-241	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTATTTTTTAA	NA	False	NA	NA	False	TTTAAA	-15	NA	71834592	71827011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
ES.33198.12	chr8	-	1755	4	NIC	ENSMUSG00000002393.15	novel	810	3	NA	NA	0	-220	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	61.937244225282	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCCTCTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	71834604	71827981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71828147_71828392_71828918_71831032_71831128_71833634
ES.33198.3	chr8	-	2341	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	-115	-8	-115	4	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCTTTCTTCTGCA	NA	False	NA	0	True	AATAAA	-20	NA	71834719	71826762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
ES.33198.4	chr8	-	6834	2	ISM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	12	-6	12	2	intron_retention	FALSE	canonical	3	129	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTCTGCTTTCTTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	71834592	71826764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71827399_71828392
ES.33198.5	chr8	-	2592	1	Genic_Genomic	ENSMUSG00000002393.15	novel	NA	NA	NA	NA	-923	1	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCCTCTGCTTTCTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	71829357	71826765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_71826800_71829400
ES.33198.6	chr8	-	4332	3	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	6	1	intron_retention	FALSE	canonical	3	129	junction_1	9	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGCCTCTGCTTTCTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	71834598	71826765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71827399_71828392_71831128_71833634
ES.33198.7	chr8	-	2970	4	NIC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	61.937244225282	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGCCTCTGCTTTCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	71834604	71826766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71828147_71828392_71828918_71831032_71831128_71833634
ES.33198.9	chr8	-	2740	4	NNC	ENSMUSG00000002393.15	novel	2218	4	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_1	64.7370750720859	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCAGCCTCTGCTTT	NA	False	NA	-8	True	AATAAA	-12	NA	71834581	71826770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71827944_71828392_71828918_71831032_71831128_71833634
ES.33199.1	chr8	+	1441	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	-17	9	-17	-9	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCAGTGGTGTATG	NA	False	NA	80	True	AAAACA	-7	NA	71849487	71857254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.10	chr8	+	1334	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	16	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.500640335446	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCACCCTTGGTGTCACT	NA	False	NA	14	True	AATAAA	-16	NA	71849520	71857188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71855372_71855520_71855619_71855707_71856838
ES.33199.11	chr8	+	5272	17	Fusion	ENSMUSG00000031820.10_ENSMUSG00000046295.14	novel	1433	9	NA	NA	16	-5	intron_retention	FALSE	canonical	0	0	junction_9	141.27277194757	309	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATGCTACTTTGTCTCC	NA	False	NA	13	True	NA	NA	NA	71849520	71862543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838_71858383_71858471_71858606_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71861469_71861565_71861696_71861870
ES.33199.12	chr8	+	3028	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	18	92	intron_retention	FALSE	non_canonical	0	0	junction_5	122.40381479983	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGAGGACCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	71849522	71856068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852885_71853080_71854349_71855389_71855520_71855619
ES.33199.13	chr8	+	4088	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	18	-76	intron_retention	FALSE	non_canonical	0	0	junction_4	122.856146175359	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCACCCTTGGTGTCAC	NA	False	NA	13	True	AATAAA	-15	NA	71849522	71857187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71852291_71852372_71852891_71853088_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.14	chr8	+	1486	3	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	19	5230	19	-567	5prime_fragment	FALSE	canonical	3	350	junction_2	7	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACAGGTGTGCCCAG	NA	False	NA	NA	False	NA	NA	NA	71849523	71852033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71849665_71850322_71850670_71851035
ES.33199.15	chr8	+	2036	7	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	19	1455	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	160.228396012969	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGATGTGGCAGGACAGT	NA	False	NA	NA	False	NA	NA	NA	71849523	71854093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71852608_71852885_71853080
ES.33199.16	chr8	+	2787	7	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	19	-68	intron_retention	FALSE	canonical	3	269	junction_2	33.0286071291069	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTCACTTTGGGCT	NA	False	NA	21	True	AATAAA	-23	NA	71849523	71857195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71849665_71850322_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.17	chr8	+	1249	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	19	1445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	167.587930012022	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAGAGATGTG	NA	False	NA	NA	False	NA	NA	NA	71849523	71854083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71852608_71852885_71853080_71853186_71853962
ES.33199.18	chr8	+	1428	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	20	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	123.500640335446	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGGCTCAGCTGTATC	NA	False	NA	100	True	ACTAAA	-18	NA	71849524	71857274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71855360_71855520_71855619_71855707_71856838
ES.33199.19	chr8	+	2508	1	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	21	-567	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACAGGTGTGCCCAG	NA	False	NA	NA	False	NA	NA	NA	71849525	71852033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71849500_71852000
ES.33199.2	chr8	+	1235	9	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	0	-70	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	113.884535824668	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTGGTGTCACTTTGGG	NA	False	NA	19	True	AATAAA	-21	NA	71849504	71857193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850542_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.20	chr8	+	2151	6	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	22	1416	intron_retention	FALSE	non_canonical	0	0	junction_5	137.830910901728	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71849526	71854054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852885_71853080
ES.33199.21	chr8	+	1816	2	ISM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	24	5261	24	-598	intron_retention	FALSE	canonical	3	364	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71849528	71852002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71849665_71850322
ES.33199.22	chr8	+	2374	8	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	25	-75	intron_retention	FALSE	canonical	3	269	junction_4	31.4571298819228	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCACCCTTGGTGTCACT	NA	False	NA	14	True	AATAAA	-16	NA	71849529	71857188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71855520_71855619_71855707_71856838
ES.33199.23	chr8	+	1197	8	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	61	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.261060930371	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTTTGTCACCGGAAT	NA	False	NA	-24	True	NA	NA	NA	71849565	71857150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850667_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.24	chr8	+	3578	5	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	-64	-70	intron_retention	FALSE	non_canonical	0	0	junction_2	146.743611445269	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTGGTGTCACTTTGGG	NA	False	NA	19	True	AATAAA	-21	NA	71852105	71857193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71852291_71852372_71852885_71853080_71855520_71855619_71855707_71856838
ES.33199.27	chr8	+	2087	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71858643	71862552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.28	chr8	+	3182	6	NIC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	-7	3	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTCCATGTCTCA	NA	False	NA	21	True	NA	NA	NA	71858646	71862551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71861469_71861565
ES.33199.29	chr8	+	1561	8	ISM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	750	0	-3	5prime_fragment	FALSE	canonical	3	14	junction_4	32.6384023218424	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGTACCAAATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	71858653	71861798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.3	chr8	+	4411	15	Fusion	ENSMUSG00000031820.10_ENSMUSG00000046295.14	novel	1433	9	NA	NA	4	6	intron_retention	TRUE	canonical	3	30	junction_11	130.174999951008	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGCTGTTGGATTGG	NA	False	NA	NA	False	NA	NA	NA	71849508	71861807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_71849665_71850326_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.30	chr8	+	2140	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	-4	0	4	multi-exon	FALSE	canonical	3	14	junction_4	30.5366071298041	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71858653	71862552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.31	chr8	+	2372	8	FSM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	-11	-426	1	-2	multi-exon	FALSE	canonical	3	94	junction_7	7.9256751466744	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858654	71862546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.32	chr8	+	1819	6	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-5	771	1	-60	5prime_fragment	FALSE	canonical	3	99	junction_2	7.57891812859857	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCCCTTTGCTCTCTCCC	NA	False	NA	NA	False	NA	NA	NA	71858654	71861741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.33	chr8	+	5777	4	ISM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	1	-2388	1	2388	intron_retention	FALSE	canonical	3	99	junction_2	8.01387685344754	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATTACAAGTAGCTTT	NA	False	NA	NA	False	AAGAAA	-28	NA	71858654	71864936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505
ES.33199.34	chr8	+	2893	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	1	821	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTGATTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	71858654	71863369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.35	chr8	+	2629	6	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-5	-39	1	3	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTCCATGTCTCA	NA	False	NA	21	True	NA	NA	NA	71858654	71862551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.36	chr8	+	3090	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-5	-675	1	639	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTGGCAGCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	71858654	71863187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.37	chr8	+	3069	6	NIC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	2	-3	intron_retention	FALSE	canonical	3	94	junction_5	8.73155198117723	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTACTTTGTCTCCAT	NA	False	NA	15	True	NA	NA	NA	71858655	71862545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71861469_71861565_71861696_71861870
ES.33199.38	chr8	+	2098	10	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	2	50377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	38.1413873908484	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTTTAAATGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	71858655	71912925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870_71862543_71912892
ES.33199.39	chr8	+	5025	6	NIC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	2	2388	intron_retention	FALSE	canonical	3	99	junction_1	6.19677335393187	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATTACAAGTAGCTTT	NA	False	NA	NA	False	AAGAAA	-28	NA	71858655	71864936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.4	chr8	+	3280	5	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	4	1452	intron_retention	FALSE	non_canonical	0	0	junction_4	146.445168919975	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGATGTGGCAGGAC	NA	False	NA	NA	False	NA	NA	NA	71849508	71854090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71849665_71850322_71850670_71851035_71852291_71852372_71852885_71853080
ES.33199.40	chr8	+	1841	8	NNC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	-3	-44	intron_retention	FALSE	canonical	0	0	junction_2	48.046745945156	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGCTGTCCACTCATG	NA	False	NA	NA	False	NA	NA	NA	71858656	71861757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859101_71859187_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.41	chr8	+	2525	7	NNC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	-2	0	intron_retention	FALSE	canonical	2	4	junction_5	38.7843038125248	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858657	71862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71861094_71861308_71861469_71861565
ES.33199.42	chr8	+	2242	8	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	30	junction_4	27.1916854038517	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858657	71862546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.43	chr8	+	2564	8	NNC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	2	3	junction_4	46.622233462815	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858657	71862546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71860975_71861094_71861308_71861469_71861565_71861696_71861870
ES.33199.44	chr8	+	1696	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	32.4651255195479	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858657	71862546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71860290_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.45	chr8	+	1816	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	170	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACATGGTGCTTCTGGAA	NA	False	NA	NA	False	NA	NA	NA	71858659	71862297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.46	chr8	+	1488	8	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	27.1916854038517	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGTACCAAATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	71858663	71861798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.47	chr8	+	2445	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	5	-40	-1	4	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71858664	71862552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.48	chr8	+	2012	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	6	392	0	0	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858665	71862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.49	chr8	+	1501	10	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	37.8975226396426	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACAGTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71858665	71862126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860125_71860262_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.5	chr8	+	3853	6	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	4	-58	intron_retention	FALSE	canonical	3	269	junction_2	35.9855526565871	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGCTCACTGAGACC	NA	False	NA	31	True	AATAAA	-33	NA	71849508	71857205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71849665_71850322_71852291_71852372_71852452_71854323_71855520_71855619_71855707_71856838
ES.33199.50	chr8	+	1520	8	NNC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.3127980451639	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858666	71862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.51	chr8	+	2176	10	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	44.4872016552077	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTACTTTGTCTCCATG	NA	False	NA	16	True	NA	NA	NA	71858666	71862546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71860975_71861094_71861308_71861469_71861565_71861696_71861870
ES.33199.52	chr8	+	1775	3	ISM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	1	1251	1	-932	intron_retention	FALSE	canonical	3	99	junction_2	8.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71858666	71860869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322
ES.33199.53	chr8	+	1787	3	NIC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	1	-932	intron_retention	FALSE	canonical	3	99	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71858666	71860869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858984_71859322_71859429_71859505
ES.33199.54	chr8	+	2408	6	NIC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	1	-4	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGTACCAAATGTGCT	NA	False	NA	NA	False	NA	NA	NA	71858666	71861797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71861469_71861565
ES.33199.56	chr8	+	3201	6	NIC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	1	641	intron_retention	FALSE	canonical	3	94	junction_5	9.09065454189081	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCAGCTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	71858666	71863189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.57	chr8	+	1638	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACAGTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71858666	71862126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.58	chr8	+	2703	7	NNC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_2	50.9206899665221	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71858666	71862552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859101_71859187_71859322_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.59	chr8	+	3239	5	NIC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	1	3	intron_retention	FALSE	canonical	3	99	junction_2	7.39509972887452	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTCCATGTCTCA	NA	False	NA	21	True	NA	NA	NA	71858666	71862551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71861469_71861565
ES.33199.60	chr8	+	1697	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	17	422	3	-1	multi-exon	FALSE	canonical	3	14	junction_4	30.5366071298041	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACAGTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71858670	71862126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.61	chr8	+	2554	7	NIC	ENSMUSG00000046295.14	novel	1935	8	NA	NA	7	-1	intron_retention	FALSE	canonical	3	94	junction_6	8.31998931623246	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACAGTGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	71858674	71862126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71861469_71861565_71861696_71861870
ES.33199.62	chr8	+	2994	8	FSM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	10	-1069	8	641	multi-exon	FALSE	canonical	3	94	junction_7	7.9256751466744	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCAGCTGTATTTCT	NA	False	NA	NA	False	NA	NA	NA	71858675	71863189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.63	chr8	+	4993	6	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	16	-2424	8	2388	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATTACAAGTAGCTTT	NA	False	NA	NA	False	AAGAAA	-28	NA	71858675	71864936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565
ES.33199.64	chr8	+	1924	8	FSM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	11	0	9	0	multi-exon	FALSE	canonical	3	94	junction_7	7.9256751466744	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858676	71862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.65	chr8	+	1278	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_4	30.2158898594763	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858677	71862120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71860262_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ES.33199.66	chr8	+	3358	5	NIC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	19	643	intron_retention	FALSE	canonical	3	99	junction_2	8.25757228245687	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCAGCTGTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	71858686	71863191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71858742_71858830_71858984_71859322_71860687_71861308_71861469_71861565
ES.33199.68	chr8	+	417	2	NNC	ENSMUSG00000046295.14	novel	2410	7	NA	NA	1761	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTCCATGTCTCAT	NA	False	NA	22	True	NA	NA	NA	71862095	71862552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71862187_71862226
ES.33199.7	chr8	+	1712	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	4	-283	4	283	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTCTCGCCATGAGCA	NA	False	NA	NA	False	NA	NA	NA	71849508	71857546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.33199.9	chr8	+	1716	8	NIC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	6	-77	intron_retention	FALSE	canonical	3	269	junction_3	31.1972002930143	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCACCCTTGGTGTCA	NA	False	NA	12	True	AATAAA	-14	NA	71849510	71857186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71849665_71850322_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ES.332.1	chr1	-	5193	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	72	-1884	0	1884	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTGGCATTATACTAAA	NA	False	NA	NA	False	NA	NA	NA	38036324	38022385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.10	chr1	-	1443	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	66	1872	-6	333	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCTAAAAGTGTGAGT	NA	False	NA	41	True	AGTAAA	-19	NA	38036330	38026141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.11	chr1	-	1301	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195032.6	1444	5	680	-537	-278	288	multi-exon	FALSE	canonical	3	37	junction_4	367.038400579558	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTCCATTGGCTGCT	NA	False	NA	-4	True	ATTAAA	-21	NA	38036017	38026186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38035973
ES.332.12	chr1	-	1372	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195032.6	1444	5	412	-340	20	91	multi-exon	FALSE	canonical	3	37	junction_4	367.038400579558	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTTCCTTGTCCGTGA	NA	False	NA	88	True	NA	NA	NA	38036285	38026383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38035973
ES.332.13	chr1	-	1114	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	64	2203	-8	2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTCTGTTTTTAATC	NA	False	NA	-1	True	NA	NA	NA	38036332	38026472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.14	chr1	-	1888	5	NNC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	365.806301203246	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036286	38026474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38026861_38029283_38029539_38033072_38033192_38033836_38034923_38036244
ES.332.15	chr1	-	2620	4	FSM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	-13	-2	6	0	multi-exon	FALSE	canonical	3	675	junction_1	99.432836069826	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036318	38026474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38034923_38036189
ES.332.16	chr1	-	1093	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	606	0	-25	0	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036368	38026474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.17	chr1	-	810	4	NIC	ENSMUSG00000058407.13	novel	3381	5	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	404.737775191131	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036285	38026474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38026861_38033072_38033192_38034713_38034923_38036189
ES.332.18	chr1	-	2570	4	NIC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	195	junction_3	299.689098159335	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTCACATGTCTGTT	NA	False	NA	-8	True	NA	NA	NA	38036328	38026479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38026861_38029283_38029539_38033072_38034923_38036244
ES.332.19	chr1	-	725	4	NIC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	4	-63	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	406.143652746989	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCTGAATTCTCTATT	NA	False	NA	-19	True	TTTAAA	-9	NA	38036320	38026539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38026861_38033072_38033192_38034713_38034923_38036244
ES.332.2	chr1	-	5011	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	689	-4001	20	1796	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	38036285	38022473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.20	chr1	-	6211	2	ISM	ENSMUSG00000058407.13	ENSMUST00000193832.6	3472	4	34	71	15	-69	intron_retention	FALSE	canonical	3	916	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGAGGGTCTGAATTC	NA	False	NA	-25	True	TTTAAA	-3	NA	38036290	38026545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072
ES.332.21	chr1	-	3131	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	73	2600	1	-146	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTTAGTGGAAATTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	38036323	38026869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.22	chr1	-	3067	4	FSM	ENSMUSG00000058407.13	ENSMUST00000193832.6	3472	4	6	399	6	-150	multi-exon	FALSE	canonical	3	195	junction_3	348.930747665875	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACTTTTAGTGGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	38036318	38026873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.23	chr1	-	2673	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	-20	3151	-20	-697	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTATTGATTAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	38036416	38027420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.24	chr1	-	2536	4	FSM	ENSMUSG00000058407.13	ENSMUST00000193832.6	3472	4	-10	946	9	-697	multi-exon	FALSE	canonical	3	195	junction_3	348.930747665875	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTATTGATTAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	38036334	38027420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.25	chr1	-	4063	3	ISM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	20	945	20	-698	5prime_fragment	FALSE	canonical	3	765	junction_2	75.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTATTGATTAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	38036285	38027421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38034923_38036189
ES.332.26	chr1	-	2419	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	88	3297	-3	-843	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGTGAATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	38036308	38027566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.27	chr1	-	3223	3	NIC	ENSMUSG00000058407.13	novel	3472	4	NA	NA	20	1132	intron_retention	FALSE	canonical	3	195	junction_2	360.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTGGCACCATAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	38036285	38028206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38029539_38033072_38034923_38036244
ES.332.28	chr1	-	1790	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	76	3938	4	1131	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGTGGCACCATAGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	38036320	38028207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.29	chr1	-	1742	4	FSM	ENSMUSG00000058407.13	ENSMUST00000193832.6	3472	4	-3	1733	-3	1131	multi-exon	FALSE	canonical	3	195	junction_3	348.930747665875	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGTGGCACCATAGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	38036327	38028207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.3	chr1	-	3489	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	73	-181	1	181	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGATGTGCCAATTTTA	NA	False	NA	NA	False	AGTAAA	-18	NA	38036323	38024088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.30	chr1	-	1971	4	ISM	ENSMUSG00000058407.13	ENSMUST00000195032.6	1444	5	412	1484	20	1131	5prime_fragment	FALSE	canonical	3	37	junction_3	423.355117549742	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGTGGCACCATAGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	38036285	38028207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38035973
ES.332.31	chr1	-	3320	3	ISM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	-23	1731	-4	1131	5prime_fragment	FALSE	canonical	3	765	junction_2	75.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGTGGCACCATAGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	38036328	38028207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38034923_38036189
ES.332.32	chr1	-	1376	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	81	4347	9	722	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTGCATTTTTTTGTT	NA	False	NA	NA	False	AATAGA	-13	NA	38036315	38028616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.33	chr1	-	1117	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	4576	20	493	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCTAGTTAACGTTTA	NA	False	NA	NA	False	NA	NA	NA	38036285	38028845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.34	chr1	-	633	4	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	111	5060	20	9	5prime_fragment	FALSE	canonical	3	765	junction_3	81.3183046224321	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTAGAATGGAGACTT	NA	False	NA	NA	False	AATACA	-17	NA	38036285	38029329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.4	chr1	-	3343	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	562	-2206	-16	1	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTCTCTGTTTGATGGT	NA	False	NA	NA	False	TATAAA	-18	NA	38036412	38024268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ES.332.5	chr1	-	4736	4	NIC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	20	-1	intron_retention	FALSE	canonical	3	195	junction_3	299.689098159335	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGTTCTCTGTTTGATG	NA	False	NA	NA	False	TATAAA	-16	NA	38036285	38024270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38026861_38029283_38029539_38033072_38034923_38036244
ES.332.6	chr1	-	3301	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	78	2	6	-2	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCGTTCTCTGTTTGAT	NA	False	NA	NA	False	TATAAA	-15	NA	38036318	38024271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.332.7	chr1	-	2721	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195032.6	1444	5	683	-1960	-275	-494	multi-exon	FALSE	canonical	3	37	junction_4	367.038400579558	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGCGGTATTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	38036014	38024763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38035973
ES.332.8	chr1	-	5491	3	NIC	ENSMUSG00000058407.13	novel	2605	4	NA	NA	19	480	intron_retention	FALSE	canonical	3	765	junction_2	75.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTACTGAGATGGCTCA	NA	False	NA	NA	False	AATAAA	-29	NA	38036286	38025994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38029539_38033072_38034923_38036189
ES.332.9	chr1	-	1571	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	68	1742	-4	463	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAGTATAGCATCA	NA	False	NA	NA	False	AATAAA	-12	NA	38036328	38026011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ES.3320.1	chr10	-	3592	13	NNC	ENSMUSG00000020131.15	novel	2539	15	NA	NA	11	-4	intron_retention	TRUE	canonical	0	0	junction_1	1.22474487139159	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAAGATGTCGAGTTT	NA	False	NA	NA	False	AATAAA	-5	NA	80165276	80157124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80157756_80157914_80158044_80158557_80158683_80158823_80159611_80159687_80160067_80160275_80160979_80161066_80161240_80161416_80161506_80161606_80161684_80161783_80161913_80161993_80162087_80164779_80164885_80165104
ES.33200.1	chr8	-	2654	8	NNC	ENSMUSG00000034911.9	novel	3488	13	NA	NA	-934	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2.9485382057929	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGGTAGAGAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	71843864	71836919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71838438_71838559_71838683_71838830_71838917_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843430_71843725
ES.33200.2	chr8	-	3259	14	NNC	ENSMUSG00000034911.9	novel	2438	13	NA	NA	-10122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.2960438900967	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTTTGTCCCTGGCA	NA	False	NA	NA	False	NA	NA	NA	71858568	71838012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71838438_71838559_71838683_71838830_71838917_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843426_71843564_71843699_71845033_71845160_71847018_71847455_71847693_71847816_71847983_71848114_71855603_71855675_71857746
ES.33200.3	chr8	-	1502	7	NNC	ENSMUSG00000034911.9	novel	2438	13	NA	NA	-964	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.80277563773199	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTCCTTTGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	71843894	71838015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71838438_71838559_71838683_71839993_71840222_71841399_71841650_71842664_71842830_71843284_71843430_71843725
ES.33200.4	chr8	-	4537	3	ISM	ENSMUSG00000034911.9	ENSMUST00000049184.9	2438	13	5605	5	106	-5	intron_retention	FALSE	canonical	3	5	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACCTGTCCTTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	71842824	71838017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71838438_71838559_71838683_71838830
ES.33200.5	chr8	-	2377	2	Antisense	novelGene_ENSMUSG00000046295.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	71859305	71854856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_71855675_71857746
ES.33201.1	chr8	-	177	1	Intergenic	novelGene_27049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	71881635	71881458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_71881500_71881600
ES.33202.1	chr8	-	3472	4	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	-4	3	-4	-3	intron_retention	FALSE	canonical	3	51	junction_3	4.96655480858378	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCCTCCAATTTGTG	NA	False	NA	-9	True	NA	NA	NA	71916303	71909351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889
ES.33202.2	chr8	-	1954	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	-10	34	-10	-34	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAATAATAATAAA	NA	False	NA	-40	True	NA	NA	NA	71916309	71909382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
ES.33202.3	chr8	-	1997	6	NNC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	0	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.9770272639518	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAATAATAATAAA	NA	False	NA	-40	True	NA	NA	NA	71916299	71909382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71915003_71915057_71916109
ES.33202.4	chr8	-	1183	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	1	-34	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	26.7124606795322	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAATAATAATAAA	NA	False	NA	-40	True	NA	NA	NA	71916265	71909382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71910022_71910681_71910899_71911021_71911193_71916109
ES.33202.5	chr8	-	2597	4	NIC	ENSMUSG00000007950.10	novel	1978	5	NA	NA	7	-34	intron_retention	FALSE	canonical	3	51	junction_2	6.84754619472471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAATAATAATAAA	NA	False	NA	-40	True	NA	NA	NA	71916292	71909382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71910899_71911021_71911193_71913889_71914617_71916109
ES.33202.6	chr8	-	1882	2	FSM	ENSMUSG00000007950.10	ENSMUST00000212503.2	2626	2	-51	795	-18	-795	multi-exon	FALSE	canonical	3	66	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTAAAATTAATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	71916317	71912942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71914617_71916109
ES.33203.1	chr8	+	641	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	-29	-5	-29	5	multi-exon	FALSE	canonical	3	904	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTATGTATTAACTTACAG	8891	False	NA	23	True	AATAAA	-23	NA	71917573	71918396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71917712_71917893
ES.33204.1	chr8	+	2081	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	-147	-1	-147	1	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTGTATTTTTCTGT	NA	False	NA	14	True	NA	NA	NA	71921695	71928743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.10	chr8	+	3703	3	NIC	ENSMUSG00000074247.11	novel	874	4	NA	NA	0	118	intron_retention	FALSE	canonical	2	515	junction_2	164.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGTCTTTGCTCCGCA	NA	False	NA	18	True	AATAAA	-19	NA	71921854	71927736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71924891_71926418_71926481_71927131
ES.33204.11	chr8	+	1063	6	NIC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	1	117	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	361.209855900971	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGCGTCTTTGCTCCGC	NA	False	NA	17	True	AATAAA	-18	NA	71921855	71927735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71921970_71922186_71922337_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.12	chr8	+	1998	4	FSM	ENSMUSG00000074247.11	ENSMUST00000098645.11	874	4	1	-1125	1	1	multi-exon	FALSE	canonical	2	515	junction_3	146.765875537273	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTGTATTTTTCTGT	NA	False	NA	14	True	NA	NA	NA	71921855	71928743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71921970_71924680_71924891_71926418_71926481_71927131
ES.33204.15	chr8	+	1753	3	NIC	ENSMUSG00000074247.11	novel	1881	4	NA	NA	5	-30	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	257	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAAAAACAAAT	NA	False	NA	-17	True	AATAGA	-39	NA	71921859	71928712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71921970_71926418_71926481_71927131
ES.33204.16	chr8	+	1808	4	NIC	ENSMUSG00000074247.11	novel	1929	5	NA	NA	27	-30	combination_of_known_junctions	FALSE	canonical	2	31	junction_2	217.335378313487	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAAAAACAAAT	NA	False	NA	-17	True	AATAGA	-39	NA	71921881	71928712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71921970_71924684_71924762_71926418_71926481_71927131
ES.33204.17	chr8	+	3595	4	NIC	ENSMUSG00000074247.11	novel	1956	5	NA	NA	28	115	intron_retention	FALSE	canonical	2	515	junction_3	145.648740315718	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACGGCGTCTTTGCTCC	NA	False	NA	15	True	AATAAA	-16	NA	71921882	71927733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.2	chr8	+	1108	6	NNC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	-4	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	370.018702230036	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGCGTCTTTGCTCCGC	NA	False	NA	17	True	AATAAA	-18	NA	71921838	71927735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71921970_71922587_71922766_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.3	chr8	+	925	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	1	1007	1	117	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGCGTCTTTGCTCCGC	NA	False	NA	17	True	AATAAA	-18	NA	71921843	71927735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.4	chr8	+	2061	6	NNC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	-2	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	367.700203970572	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAAAAACAAAT	NA	False	NA	-17	True	AATAGA	-39	NA	71921846	71928712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71921970_71922174_71922337_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.5	chr8	+	4684	3	NIC	ENSMUSG00000074247.11	novel	1956	5	NA	NA	1	-30	intron_retention	FALSE	canonical	2	515	junction_2	164.5	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATTAAAAACAAAT	NA	False	NA	-17	True	AATAGA	-39	NA	71921849	71928712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71924891_71926418_71926481_71927131
ES.33204.7	chr8	+	602	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	12	1319	0	-195	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGAGGTATCAGTACA	NA	False	NA	NA	False	NA	NA	NA	71921854	71927423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ES.33204.8	chr8	+	4101	3	FSM	ENSMUSG00000074247.11	ENSMUST00000139904.8	784	3	0	-3317	0	1	multi-exon	FALSE	canonical	3	799	junction_2	3	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTGTATTTTTCTGT	NA	False	NA	14	True	NA	NA	NA	71921854	71928743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71921970_71924680_71924762_71924838
ES.33205.1	chr8	-	3777	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	-120	-4	-120	4	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGGTCAGAGCAGTGAAG	NA	False	NA	-17	True	AATAAA	-20	NA	71938727	71928658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.10	chr8	-	3484	17	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-116	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	8.79630604287959	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCGAGGTCAGAGCAGTG	NA	False	NA	-20	True	AATAAA	-17	NA	71938723	71928661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938683
ES.33205.11	chr8	-	4372	16	NIC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	18	junction_5	6.46838465151849	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCGAGGTCAGAGCAGT	NA	False	NA	-21	True	AATAAA	-16	NA	71938623	71928662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.12	chr8	-	2682	10	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.3278854008293	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCGAGGTCAGAGCAGT	NA	False	NA	-21	True	AATAAA	-16	NA	71938661	71928662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71934978_71937662_71937755_71938397
ES.33205.13	chr8	-	3593	16	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-89	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	9.06176338002464	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTCGAGGTCAGAGCAG	NA	False	NA	-22	True	AATAAA	-15	NA	71938696	71928663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935618_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.14	chr8	-	5531	13	NIC	ENSMUSG00000034863.10	novel	3785	18	NA	NA	-112	-1	intron_retention	FALSE	canonical	3	20	junction_1	6.58860548388065	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTCGAGGTCAGAGCAG	NA	False	NA	-22	True	AATAAA	-15	NA	71938719	71928663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931703_71931794_71931987_71933079_71934671_71934776_71934833_71934927_71935055_71935150_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643
ES.33205.15	chr8	-	3639	17	NNC	ENSMUSG00000034863.10	novel	3785	18	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.5805602196094	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71938613	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934262_71934395_71934595_71934671_71934776_71934833_71934927_71935055_71935618_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.16	chr8	-	4077	17	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-38	-4	intron_retention	FALSE	canonical	0	0	junction_1	8.81050509335305	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71938645	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71928963_71929275_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.17	chr8	-	3609	4	NNC	ENSMUSG00000034863.10	novel	4927	9	NA	NA	2824	-4	intron_retention	FALSE	canonical	0	0	junction_2	17.6823829464998	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71933558	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71931476_71931570_71931700_71931794_71931987_71933079
ES.33205.18	chr8	-	3712	16	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-56	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.08380732708238	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71938663	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937644_71938397
ES.33205.19	chr8	-	4007	16	NIC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-38	-4	intron_retention	FALSE	canonical	3	18	junction_5	6.4380811496042	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71938645	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.20	chr8	-	4296	15	NIC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-79	-4	intron_retention	FALSE	canonical	0	0	junction_5	9.16654297999424	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71938686	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643
ES.33205.22	chr8	-	2710	12	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	642	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	7.5711501140571	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGCTCGAGGTCAGAG	NA	False	NA	-25	True	AATAAA	-12	NA	71937965	71928666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71928806_71933144_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643
ES.33205.23	chr8	-	2889	13	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-113	-3135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.40870359029762	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	71938720	71932621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936015_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.3	chr8	-	5498	13	NIC	ENSMUSG00000034863.10	novel	3785	18	NA	NA	-41	3	intron_retention	FALSE	canonical	3	20	junction_1	6.74948557710553	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938648	71928659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71934671_71934776_71934833_71934927_71935055_71935150_71935786_71935883_71936012_71936091_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.4	chr8	-	3686	18	NNC	ENSMUSG00000034863.10	novel	3785	18	NA	NA	-110	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.59910673722572	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938717	71928659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71928963_71929042_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.5	chr8	-	3849	18	FSM	ENSMUSG00000034863.10	ENSMUST00000213382.2	3785	18	-61	-3	-61	3	multi-exon	FALSE	canonical	0	0	junction_6	9.99273092203912	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938668	71928659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934262_71934395_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.6	chr8	-	3173	17	NNC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-119	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	10.3712342563458	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGAGGTCAGAGCAGTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	71938726	71928659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71928963_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935622_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ES.33205.9	chr8	-	4784	14	NIC	ENSMUSG00000034863.10	novel	3653	17	NA	NA	-37	2	intron_retention	FALSE	canonical	3	18	junction_5	6.79888609045672	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGAGGTCAGAGCAGTGA	NA	False	NA	-19	True	AATAAA	-18	NA	71938644	71928660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935786_71935883_71936012_71936091_71937217_71937392_71937526_71937643_71937755_71938397
ES.33206.1	chr8	+	2088	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	589	123	-29	-123	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	16	True	ATTAAA	-18	NA	71941335	71945921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.10	chr8	+	3195	5	NIC	ENSMUSG00000007610.16	novel	2830	6	NA	NA	-2	-123	intron_retention	FALSE	canonical	3	52	junction_2	11.8400802362146	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	16	True	ATTAAA	-18	NA	71941384	71945921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71945000_71945182
ES.33206.11	chr8	+	2237	9	NNC	ENSMUSG00000007610.16	novel	2392	9	NA	NA	17	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.1120304031462	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTAGTAGCATGTGG	NA	False	NA	16	True	ATTAAA	-18	NA	71941411	71945921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943298_71943597_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.13	chr8	+	1611	6	ISM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	705	132	-33	-132	3prime_fragment	FALSE	canonical	0	0	junction_2	27.5927526716709	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTGTGTAGT	NA	False	NA	7	True	ATTAAA	-9	NA	71942069	71945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.14	chr8	+	2487	4	NIC	ENSMUSG00000007610.16	novel	2392	9	NA	NA	447	-124	intron_retention	FALSE	canonical	3	55	junction_1	5.55777733351102	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71942549	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.15	chr8	+	1952	5	NNC	ENSMUSG00000007610.16	novel	2109	8	NA	NA	1702	2652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.7195222034272	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTCCTGATCAGATAT	NA	False	NA	5	True	AATAAA	-12	NA	71943804	71948696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71943854_71944068_71944235_71944720_71944998_71945182_71945616_71947669
ES.33206.16	chr8	+	2601	3	NNC	ENSMUSG00000007610.16	novel	2830	6	NA	NA	2748	2655	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCTGATCAGATATTCT	NA	False	NA	8	True	AATAAA	-15	NA	71944850	71948699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71945000_71945182_71946528_71947592
ES.33206.17	chr8	+	2356	1	Intergenic	novelGene_27050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCTGATCAGATATTCT	NA	False	NA	8	True	AATAAA	-15	NA	71946343	71948699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71946300_71948700
ES.33206.2	chr8	+	2244	9	NNC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	-16	-124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.5043856274784	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941348	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942330_71942978_71943181_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.3	chr8	+	1987	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	-2	124	-2	-124	multi-exon	TRUE	canonical	0	0	junction_4	25.5774135055258	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941362	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33206.4	chr8	+	2263	8	NNC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	1	-132	intron_retention	FALSE	non_canonical	0	0	junction_4	25.6371860024155	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTACTTGTGTAGT	NA	False	NA	7	True	ATTAAA	-9	NA	71941365	71945912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943181_71943538_71943612_71943709_71944235_71944720_71945000_71945182
ES.33206.5	chr8	+	2063	8	NNC	ENSMUSG00000007610.16	novel	2109	8	NA	NA	2	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.8542599592428	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941366	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944640_71945000_71945182
ES.33206.6	chr8	+	1396	8	ISM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	621	966	3	-966	5prime_fragment	FALSE	canonical	0	0	junction_4	25.2303671905787	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTCAGCCTCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	71941367	71945078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720
ES.33206.7	chr8	+	2023	9	NNC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	-2	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.4743744808651	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941369	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944098_71944235_71944720_71945000_71945182
ES.33206.8	chr8	+	2097	9	NNC	ENSMUSG00000007610.16	novel	2800	9	NA	NA	-2	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.7073052549347	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTAGTAGCATGTG	NA	False	NA	15	True	ATTAAA	-17	NA	71941369	71945920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71941485_71941714_71941963_71942071_71942203_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ES.33207.1	chr8	-	2059	6	FSM	ENSMUSG00000034845.7	ENSMUST00000048452.6	1987	6	-67	-5	-67	5	multi-exon	FALSE	canonical	0	0	junction_4	7.60526133673262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTATTTGTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	71964463	71950403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71951050_71959480_71959563_71959663_71959722_71960244_71960952_71961107_71961205_71963994
ES.33207.2	chr8	-	2679	2	NNC	ENSMUSG00000034845.7	novel	1987	6	NA	NA	11261	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTGGTTTGTATTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	71953135	71950410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_71952745_71952790
ES.33208.1	chr8	+	221	1	Intergenic	novelGene_27051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATAAAATGGCA	NA	False	NA	NA	False	NA	NA	NA	71981954	71982175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_71982000_71982200
ES.33209.1	chr8	-	801	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	-18	9	-18	-9	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAGAGCTTGCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	71990118	71986907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
ES.33209.2	chr8	-	1884	2	NIC	ENSMUSG00000046718.9	novel	792	5	NA	NA	7	-9	intron_retention	FALSE	canonical	1	1	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAGAGCTTGCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	71990093	71986907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_71988470_71989771
ES.3321.1	chr10	+	2075	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	54	-2	54	2	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTCCGCTAAGCTGCA	7081	False	NA	20	True	AATAAA	-21	NA	80165840	80172277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ES.3321.10	chr10	+	1739	4	FSM	ENSMUSG00000035504.17	ENSMUST00000040081.7	850	4	-33	-856	24	-2	multi-exon	FALSE	canonical	0	0	junction_3	281.200205468551	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGAGTGTGTCCGCTAAG	7243	False	NA	15	True	AATAAA	-16	NA	80166002	80172272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80170943
ES.3321.11	chr10	+	1446	6	NNC	ENSMUSG00000035504.17	novel	2015	6	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	223.952316353281	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7253	False	NA	17	True	AATAAA	-18	NA	80166012	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943_80171140_80171593
ES.3321.12	chr10	+	2465	5	NNC	ENSMUSG00000035504.17	novel	2208	6	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_3	294.796858022605	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGAGTGTGTCCGCTAAG	7255	False	NA	15	True	AATAAA	-16	NA	80166014	80172272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80166180_80169336_80169431_80169522_80169662_80169889_80170628_80170943
ES.3321.2	chr10	+	2602	5	NIC	ENSMUSG00000035504.17	novel	2015	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	14	junction_4	242.851163266722	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7210	False	NA	17	True	AATAAA	-18	NA	80165969	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80170628_80170943
ES.3321.3	chr10	+	3055	3	ISM	ENSMUSG00000035504.17	ENSMUST00000186864.7	2015	6	-8	0	-8	0	intron_retention	FALSE	canonical	3	594	junction_1	2.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7211	False	NA	17	True	AATAAA	-18	NA	80165970	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80166180_80169336_80169431_80169522
ES.3321.4	chr10	+	1918	5	NNC	ENSMUSG00000035504.17	novel	2015	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.039358406204	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7221	False	NA	17	True	AATAAA	-18	NA	80165980	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80166166_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ES.3321.5	chr10	+	2021	4	NIC	ENSMUSG00000035504.17	novel	2127	5	NA	NA	3	-2	intron_retention	FALSE	canonical	3	489	junction_3	44.5196585791041	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGAGTGTGTCCGCTAAG	7222	False	NA	15	True	AATAAA	-16	NA	80165981	80172272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80166180_80169336_80169662_80169799_80169969_80170943
ES.3321.6	chr10	+	3062	1	NIC	ENSMUSG00000035504.17	novel	2208	6	NA	NA	5	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAACAATACCC	7224	False	NA	NA	False	NA	NA	NA	80165983	80169045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80166000_80169000
ES.3321.8	chr10	+	2891	4	FSM	ENSMUSG00000035504.17	ENSMUST00000153167.2	848	4	-35	-2008	18	0	multi-exon	FALSE	canonical	3	516	junction_3	38.0029238641216	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7237	False	NA	17	True	AATAAA	-18	NA	80165996	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799
ES.3321.9	chr10	+	1995	6	FSM	ENSMUSG00000035504.17	ENSMUST00000186864.7	2015	6	20	0	20	0	multi-exon	FALSE	canonical	3	14	junction_4	273.806939283868	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7239	False	NA	17	True	AATAAA	-18	NA	80165998	80172274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170546_80170628_80170943
ES.33210.1	chr8	+	1073	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	-10	-1	-2	1	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGTGTATTGTTTTC	NA	False	NA	12	True	AGTAAA	-19	NA	71995563	72000671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ES.33210.10	chr8	+	2589	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	4	-8	intron_retention	FALSE	canonical	0	0	junction_6	174.66968826903	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCACTGTGTGGAGTGT	NA	False	NA	3	True	AGTAAA	-10	NA	71995590	72000662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71995702_71995776_71995876_71996030_71996768_71997867_71997995_71998190_71998311_71998393_71998915_71999118_71999679_72000221_72000279_72000405
ES.33210.11	chr8	+	1161	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	146	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	191.279532033618	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACTGTGTGGAGTGTAT	NA	False	NA	5	True	AGTAAA	-12	NA	71995732	72000664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71995876_71996030_71996128_71996600_71996768_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000383
ES.33210.12	chr8	+	1262	2	NNC	ENSMUSG00000031813.9	novel	684	3	NA	NA	1259	1209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	72000634	72001938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72001241_72001282
ES.33210.13	chr8	+	1641	3	Intergenic	novelGene_27052	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTTGTCTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	72001148	72005294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_72001261_72001302_72001764_72004226
ES.33210.2	chr8	+	1709	9	NIC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_3	133.133157027091	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995566	72000670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71995702_71995776_71995876_71996030_71996768_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ES.33210.3	chr8	+	1979	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	135.696352198576	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGGAGTGTATTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	71995566	72000668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998915_71999118_71999679_72000221_72000279_72000405
ES.33210.4	chr8	+	2148	10	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	188.217237242134	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995566	72000670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71995702_71995776_71995876_71996030_71996128_71996600_71996768_71997867_71997995_71998190_71998311_71998393_71998915_71999118_71999679_72000221_72000279_72000405
ES.33210.5	chr8	+	1003	8	NIC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	142.361138930366	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGGAGTGTATTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	71995568	72000668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_72000221_72000279_72000405
ES.33210.6	chr8	+	1234	10	NIC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	164.382871355448	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995568	72000670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71995702_71995776_71995876_71996030_71996128_71996600_71996768_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ES.33210.7	chr8	+	1362	3	FSM	ENSMUSG00000031813.9	ENSMUST00000212234.2	387	3	-14	-961	3	-5	multi-exon	FALSE	canonical	3	346	junction_1	42.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCAGGGCTGGAGCA	NA	False	NA	NA	False	NA	NA	NA	71995568	71997160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_71995702_71995776_71995876_71996030
ES.33210.8	chr8	+	1545	1	NIC	ENSMUSG00000031813.9	novel	392	4	NA	NA	-1	-35	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71995585	71997130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_71995600_71997100
ES.33210.9	chr8	+	1031	9	NNC	ENSMUSG00000031813.9	novel	1062	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	131.252559498853	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995586	72000670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_71995702_71995794_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ES.33211.1	chr8	-	2277	2	FSM	ENSMUSG00000034829.9	ENSMUST00000163659.3	2730	2	-55	508	-55	-507	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGAATCTGCTTTGTAA	NA	False	NA	NA	False	AATAAA	-14	NA	72019300	72013706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72015581_72018897
ES.33212.1	chr8	+	3061	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-427	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.8459479513428	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021098	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021142_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.10	chr8	+	2737	14	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-145	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.9471732211921	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72021380	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72021985_72022077_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.11	chr8	+	4272	13	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-118	9	intron_retention	FALSE	canonical	1	37	junction_11	40.1631222502545	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACAGCGTTTCTGTAA	NA	False	NA	28	True	AATAAA	-24	NA	72021407	72039955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.12	chr8	+	3467	12	NIC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	-31	1	intron_retention	FALSE	canonical	1	1	junction_1	52.9209608678221	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021494	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.13	chr8	+	3307	13	NNC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.9026849324604	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCTGCCAGAGCACAGC	NA	False	NA	18	True	AATAAA	-14	NA	72021506	72039945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021630_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.14	chr8	+	5304	9	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1	junction_1	52.0911160851829	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021510	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72021985_72023533_72032047_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.15	chr8	+	3426	14	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.2463515966578	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCTGCCAGAGCACAGC	NA	False	NA	18	True	AATAAA	-14	NA	72021516	72039945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72021985_72022077_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.16	chr8	+	2938	15	NIC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	64.0593235897438	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCTGGCTGTTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	72021525	72039349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72021985_72022077_72022839_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.17	chr8	+	3535	15	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	64.0593235897438	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021525	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72021985_72022077_72022839_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.18	chr8	+	5513	9	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	129	junction_4	14.0529133990073	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021554	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.19	chr8	+	3349	14	FSM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	38	-592	38	-1	multi-exon	FALSE	canonical	0	0	junction_2	59.2463515966578	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACGCCTGCCAGAGCACAG	NA	False	NA	17	True	AATAAA	-13	NA	72021608	72039944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72021668_72021985_72022093_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.2	chr8	+	2567	11	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-421	-1	intron_retention	FALSE	canonical	0	0	junction_1	55.4108292664891	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72021104	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021142_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.20	chr8	+	3457	15	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.1799129361344	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021619	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72021668_72021985_72022093_72022839_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.21	chr8	+	3929	10	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-106	0	intron_retention	FALSE	canonical	3	59	junction_1	32.4212245676985	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72022216	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.23	chr8	+	3547	11	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-61	2	intron_retention	FALSE	canonical	1	37	junction_9	43.6931344721342	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCAGAGCACAGCGTT	NA	False	NA	21	True	AATAAA	-17	NA	72022261	72039948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037651_72037989_72038137_72038545
ES.33212.24	chr8	+	2801	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022275	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.25	chr8	+	2840	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-15	0	intron_retention	FALSE	canonical	1	37	junction_10	41.6609693074509	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022307	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037651_72037989_72038137_72038545
ES.33212.26	chr8	+	3265	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.7434741764233	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72022311	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037486_72037989_72038137_72038545
ES.33212.27	chr8	+	2554	11	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.9894905894262	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCGCCTGGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	72022323	72039345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033345_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037989_72038137_72038545
ES.33212.28	chr8	+	6512	9	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	59	junction_1	33.6860505254029	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022323	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.29	chr8	+	2581	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	12	junction_1	50.3216102962725	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTGGCTGTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	72022323	72039348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.3	chr8	+	2923	10	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-181	-1	intron_retention	FALSE	canonical	2	2	junction_1	48.8898989794643	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72021344	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.30	chr8	+	3180	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	12	junction_1	50.3216102962725	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022323	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.31	chr8	+	3345	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.9571568057249	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCTGCCAGAGCACAGC	NA	False	NA	18	True	AATAAA	-14	NA	72022323	72039945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037644_72037983_72038137_72038545
ES.33212.32	chr8	+	3023	10	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_4	62.9214678079836	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72022326	72039350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72032047_72032713_72032788_72032859_72033253_72033342_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72038137_72038545
ES.33212.33	chr8	+	3155	11	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_6	52.1655058443796	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022327	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033342_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.34	chr8	+	1553	6	NIC	ENSMUSG00000031808.8	novel	2809	4	NA	NA	12	-1276	intron_retention	FALSE	canonical	3	59	junction_1	37.1074116585892	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCAGCCATGCCTCACCT	NA	False	NA	NA	False	NA	NA	NA	72022334	72033817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410
ES.33212.35	chr8	+	3855	10	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	12	1	intron_retention	FALSE	canonical	3	59	junction_1	31.9826341768293	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022334	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.36	chr8	+	1740	8	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	14	-1989	intron_retention	FALSE	canonical	3	59	junction_1	35.9262282678132	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAGATTGCCCACAGC	NA	False	NA	NA	False	NA	NA	NA	72022336	72037360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276
ES.33212.37	chr8	+	2979	10	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	16	-1	intron_retention	FALSE	canonical	3	12	junction_1	45.9398425748551	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022338	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.38	chr8	+	3075	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	16	1	intron_retention	FALSE	canonical	3	59	junction_1	29.5911534691766	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72022338	72039350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72038137_72038545
ES.33212.39	chr8	+	3276	11	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	17	5	intron_retention	FALSE	canonical	1	12	junction_1	52.7526302661772	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGAGCACAGCGTTTCT	NA	False	NA	24	True	AATAAA	-20	NA	72022339	72039951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.4	chr8	+	3295	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-163	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	50.4898229569309	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCTGCCAGAGCACAGC	NA	False	NA	18	True	AATAAA	-14	NA	72021362	72039945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021474_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.40	chr8	+	2620	11	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	31	0	intron_retention	FALSE	canonical	1	12	junction_1	52.7677932075997	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022353	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.41	chr8	+	2455	11	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	59.1784589187654	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022359	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022486_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037486_72037989_72038137_72038545
ES.33212.42	chr8	+	2772	12	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	1	37	junction_10	41.9421088629049	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022368	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.43	chr8	+	2733	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	154	1	intron_retention	FALSE	canonical	0	0	junction_1	53.1378995034275	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	False	NA	NA	False	NA	NA	NA	72022545	72039350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022582_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.44	chr8	+	3351	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72022790	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.45	chr8	+	2742	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022804	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.46	chr8	+	6429	10	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	63.7857137919661	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72022816	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72022957_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72035609_72035668_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.47	chr8	+	3465	11	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	35	1	intron_retention	FALSE	canonical	1	3	junction_1	55.0480699025861	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72022850	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72022957_72023364_72023533_72032047_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.48	chr8	+	2663	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-166	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.2843995025628	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCGCCTGGCTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	72023132	72039347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72023210_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.5	chr8	+	2989	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-162	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.2043327359024	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACGCCTGCCAGAGCAC	NA	False	NA	15	True	AATAAA	-11	NA	72021363	72039942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72032047_72032443_72032642_72032709_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.50	chr8	+	3348	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1631	-594	-97	0	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72023201	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.51	chr8	+	3397	11	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-80	1	intron_retention	FALSE	canonical	1	37	junction_9	36.8061136226035	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72023218	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.52	chr8	+	3512	10	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-78	10	intron_retention	FALSE	canonical	1	37	junction_8	38.2838650215421	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAGCGTTTCTGTAAG	NA	False	NA	29	True	AATAAA	-25	NA	72023220	72039956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.53	chr8	+	3219	11	NNC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.1024415503061	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72023236	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037486_72037989_72038137_72038545
ES.33212.54	chr8	+	3125	10	NIC	ENSMUSG00000031808.8	novel	2730	13	NA	NA	-61	0	intron_retention	FALSE	canonical	3	121	junction_2	16.3759836195012	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCTGGCTGTTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	72023237	72039349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.55	chr8	+	3692	11	NNC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	-30	0	intron_retention	TRUE	canonical	0	0	junction_4	61.4019543662903	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72023268	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033154_72033254_72033345_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72038137_72038545
ES.33212.56	chr8	+	2687	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1698	0	-30	0	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72023268	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.57	chr8	+	5945	10	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	23	-1	intron_retention	FALSE	canonical	1	37	junction_8	38.4421964660684	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTGTTTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	72023321	72039351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72036972_72037063_72037191_72037276_72037651_72037989_72038137_72038545
ES.33212.58	chr8	+	3699	9	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	25	-1	intron_retention	FALSE	canonical	3	121	junction_2	15.8029862684241	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACGCCTGCCAGAGCACAG	NA	False	NA	17	True	AATAAA	-13	NA	72023323	72039944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.59	chr8	+	4511	9	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	56	841	intron_retention	FALSE	canonical	3	121	junction_2	15.8029862684241	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAGAAATATCTGTGGT	NA	False	NA	NA	False	AAAAAG	-15	NA	72023354	72040787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033521_72036761_72036972_72037063_72037191_72037276_72038137_72038545
ES.33212.6	chr8	+	3258	13	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-162	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	50.6959208308606	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGCCAGAGCACAGCGT	NA	False	NA	20	True	AATAAA	-16	NA	72021363	72039947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.60	chr8	+	3642	10	NIC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	56	0	intron_retention	FALSE	canonical	3	129	junction_4	13.3287028996694	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72023354	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72023533_72032047_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72038137_72038545
ES.33212.61	chr8	+	2494	11	NNC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	71	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.1024415503061	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGTTTTGTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	72023369	72039354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037486_72037989_72038137_72038545
ES.33212.62	chr8	+	2055	11	NNC	ENSMUSG00000031808.8	novel	2795	14	NA	NA	451	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.4108292664891	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72032307	72039352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72032335_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.8	chr8	+	3084	12	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-157	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.4179011754225	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021368	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33212.9	chr8	+	3363	14	NNC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	-151	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.9471732211921	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72021374	72039946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72021436_72022839_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ES.33213.11	chr8	+	3317	3	FSM	ENSMUSG00000031807.11	ENSMUST00000123240.2	2688	3	-27	-602	0	-2	multi-exon	FALSE	canonical	3	546	junction_1	62.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	13	True	ATTAAA	-13	NA	72044827	72048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72046836_72047312_72047415_72047704
ES.33213.13	chr8	+	3468	16	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	2	junction_10	248.712274637895	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72044832	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72058363_72059304_72059389_72060148
ES.33213.14	chr8	+	4874	15	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	10	218	intron_retention	FALSE	canonical	1	2	junction_10	210.794669897374	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGCCCAGGGCTTCAA	NA	False	NA	NA	False	ATTAAA	-28	NA	72044837	72060798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72059389_72060184
ES.33213.15	chr8	+	1722	4	NNC	ENSMUSG00000031807.11	novel	584	4	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_3	290.747312971247	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTGTTTCTGTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	72044839	72048910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72045149_72046727_72046836_72047312_72047415_72047707
ES.33213.16	chr8	+	2796	15	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	-7	-1627	intron_retention	FALSE	canonical	1	2	junction_10	255.316810001589	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTCCCTGGTACCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	72044847	72058588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052512_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72057680_72058250
ES.33213.18	chr8	+	3584	2	ISM	ENSMUSG00000031807.11	ENSMUST00000123240.2	2688	3	-4	-602	-4	-2	intron_retention	FALSE	canonical	3	546	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	13	True	ATTAAA	-13	NA	72044850	72048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72046836_72047312
ES.33213.19	chr8	+	3701	16	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	-4	0	intron_retention	FALSE	canonical	1	2	junction_10	204.539091618204	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTACTTTGTATGTGT	NA	False	NA	5	True	CATAAA	-23	NA	72044850	72060580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72058363_72059304_72059389_72060184
ES.33213.2	chr8	+	943	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-52	2	-52	-2	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	13	True	ATTAAA	-13	NA	72044767	72048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ES.33213.20	chr8	+	3747	17	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	-3	210	intron_retention	FALSE	canonical	0	0	junction_14	243.646444348671	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAACTTTAAAATGCCCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	72044851	72060790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72058363_72059110_72059200_72059304_72059389_72060152
ES.33213.21	chr8	+	5015	16	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_4	204.914572986458	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72044874	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052597_72052840_72053058_72053174_72054742_72054911_72055016_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72058363_72059304_72059389_72060148
ES.33213.22	chr8	+	837	5	NIC	ENSMUSG00000031807.11	novel	893	5	NA	NA	-7	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	258.883540419239	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTATTGTTTCTGTGGTT	NA	False	NA	12	True	ATTAAA	-12	NA	72044927	72048910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72045149_72046727_72046836_72047312_72047415_72047649_72047846_72048700
ES.33213.23	chr8	+	2283	14	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	2387	0	intron_retention	FALSE	canonical	1	2	junction_9	176.714458944366	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72047321	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72054911_72055016_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057680_72059304_72059389_72060184
ES.33213.24	chr8	+	2004	10	FSM	ENSMUSG00000043243.16	ENSMUST00000127285.2	1561	10	-434	-9	-350	0	multi-exon	FALSE	canonical	1	2	junction_3	4.60541817245838	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72054560	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72057680_72058250_72058363_72059304_72059389_72060184
ES.33213.25	chr8	+	5361	17	Fusion	ENSMUSG00000034807.10_ENSMUSG00000043243.16	novel	2267	15	NA	NA	287	-2	intron_retention	FALSE	canonical	1	2	junction_2	447.913387100397	1022	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72055281	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72058363_72059304_72059389_72060184_72060376_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.26	chr8	+	2404	5	NNC	ENSMUSG00000043243.16	novel	696	4	NA	NA	806	0	intron_retention	FALSE	canonical	0	0	junction_2	7.72576857018122	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72055800	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72057499_72057584_72057680_72058260_72058363_72059304_72059389_72060152
ES.33213.27	chr8	+	1446	8	NNC	ENSMUSG00000043243.16	novel	696	4	NA	NA	947	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.59153879736598	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTACTTTGTATG	NA	False	NA	2	True	CATAAA	-20	NA	72055941	72060577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72056191_72056280_72056472_72056564_72056724_72057381_72057499_72057574_72057680_72058250_72058363_72059304_72059389_72060148
ES.33213.28	chr8	+	3413	18	Fusion	ENSMUSG00000034807.10_ENSMUSG00000043243.16	novel	2267	15	NA	NA	-685	1	multi-exon	FALSE	canonical	0	0	junction_3	449.52223773083	1022	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72056702	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72056724_72057381_72057499_72057571_72057680_72058295_72058363_72059304_72059389_72060184_72060376_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.29	chr8	+	1361	5	NNC	ENSMUSG00000043243.16	novel	348	4	NA	NA	-555	-80	intron_retention	FALSE	canonical	0	0	junction_1	7.44983221287567	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCGTCTCTAAAAAAACAA	NA	False	NA	-87	True	NA	NA	NA	72056832	72060488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72056898_72057381_72057499_72057571_72058363_72059304_72059389_72060184
ES.33213.3	chr8	+	2494	4	NIC	ENSMUSG00000031807.11	novel	1062	5	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	546	junction_1	55.9185916211137	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	13	True	ATTAAA	-13	NA	72044795	72048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72046836_72047312_72047415_72047704_72047846_72048700
ES.33213.30	chr8	+	3248	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	-41	0	-41	0	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063600	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.31	chr8	+	2551	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	-6	662	-6	-657	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGATGAGTTAAGTG	NA	False	NA	NA	False	AATATA	-31	NA	72063635	72076893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.32	chr8	+	6187	10	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-3	1902	intron_retention	FALSE	canonical	0	0	junction_2	382.082144874762	996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATAGTGCAAAACATC	NA	False	NA	NA	False	AATAAA	-25	NA	72063638	72079457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065539_72065672_72070193_72070329_72070718_72070920_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075941_72076136
ES.33213.33	chr8	+	4014	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_2	281.398809521291	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72063649	72077550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065539_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.34	chr8	+	3137	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-86	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	266.444883668382	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063728	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075960_72076136
ES.33213.35	chr8	+	3179	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-82	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	339.855718978248	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063732	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.36	chr8	+	4923	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-75	1890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	259.773245136771	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACCAAAAAGTCAAAATA	NA	False	NA	NA	False	AATAAA	-13	NA	72063739	72079445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136_72078836_72078911
ES.33213.37	chr8	+	5008	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	100	-1901	-73	1901	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAAATAGTGCAAAACAT	NA	False	NA	NA	False	AATAAA	-24	NA	72063741	72079456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.39	chr8	+	4162	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-63	0	intron_retention	FALSE	canonical	3	838	junction_7	55.0059480509849	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063751	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075941_72076136
ES.33213.4	chr8	+	5574	12	Fusion	ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1451	8	NA	NA	-12	210	intron_retention	FALSE	canonical	1	2	junction_10	277.626123523724	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAACTTTAAAATGCCCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	72044807	72060790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72055133_72055204_72055310_72055407_72055571_72056280_72056724_72057381
ES.33213.40	chr8	+	3903	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-63	0	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063751	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.41	chr8	+	4290	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-63	2	intron_retention	FALSE	canonical	3	838	junction_6	62.3005459421614	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTTGGGTTTGGTGC	NA	False	NA	27	True	ATTAAA	-19	NA	72063751	72077552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.42	chr8	+	3221	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-52	1	intron_retention	FALSE	canonical	3	17	junction_8	354.293943424252	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063762	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.44	chr8	+	1959	4	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	466.948248381624	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063773	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064789_72075770_72075941_72076136
ES.33213.45	chr8	+	2964	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	259.773245136771	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063773	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136_72076590_72076696
ES.33213.46	chr8	+	2846	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-21	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	273.353269598152	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063793	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72076136
ES.33213.47	chr8	+	3793	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	17	junction_9	272.607795193021	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063795	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72075941_72076136
ES.33213.49	chr8	+	4049	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	838	junction_7	60.24722728111	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063795	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733
ES.33213.5	chr8	+	2314	1	Genic_Genomic	ENSMUSG00000031807.11	novel	NA	NA	NA	NA	-2	-624	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACAGACCTCATACCAT	NA	False	NA	NA	False	NA	NA	NA	72044817	72047131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_72044800_72047100
ES.33213.50	chr8	+	3871	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	4	junction_10	278.560029437104	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063796	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075960_72076136
ES.33213.51	chr8	+	4312	9	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	156	0	-17	0	intron_retention	FALSE	canonical	3	838	junction_7	53.4916757542704	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063797	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407
ES.33213.52	chr8	+	2002	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	156	1049	-17	339	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTCTCCATGTCTTC	NA	False	NA	NA	False	NA	NA	NA	72063797	72076506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.53	chr8	+	3026	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	269.056293842382	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063801	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073259_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.54	chr8	+	5744	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-8	1896	intron_retention	FALSE	canonical	3	838	junction_7	59.7648726259832	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTCAAAATAGTGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	72063806	72079451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.55	chr8	+	2917	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	264.070050811403	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063806	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075852_72075941_72076136
ES.33213.56	chr8	+	4998	8	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	843	junction_6	54.8523063344111	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72063809	72077550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72073499_72074407_72075941_72076136
ES.33213.57	chr8	+	4168	9	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	843	junction_7	51.9344538817922	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063809	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073499_72074407_72075941_72076136
ES.33213.58	chr8	+	1839	11	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	169	1395	-4	-7	intron_retention	FALSE	canonical	3	748	junction_9	75.5672548131795	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGCAACCTGCGTGCCT	NA	False	NA	NA	False	AATACA	-14	NA	72063810	72076160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733
ES.33213.59	chr8	+	2925	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	269.466230883903	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063811	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070826_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.6	chr8	+	1175	5	FSM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	-115	2	0	-2	multi-exon	FALSE	canonical	3	15	junction_1	254.639941878724	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	False	NA	13	True	ATTAAA	-13	NA	72044819	72048911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ES.33213.61	chr8	+	3887	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	6	junction_9	275.847494097735	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAAGTCTTTGGGTTT	NA	False	NA	22	True	ATTAAA	-14	NA	72063811	72077547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075681_72075941_72076136
ES.33213.62	chr8	+	5750	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-3	1888	intron_retention	FALSE	canonical	2	4	junction_10	278.560029437104	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAGACCAAAAAGTCAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	72063811	72079443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075960_72076136
ES.33213.63	chr8	+	3905	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	843	junction_7	56.2733627751594	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063813	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.64	chr8	+	2915	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	281.570754873442	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063813	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.65	chr8	+	2939	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	259.507693634612	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063813	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075759_72075852_72075941_72076136
ES.33213.66	chr8	+	3714	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	17	junction_9	274.744171912709	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063813	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72075475_72075733
ES.33213.67	chr8	+	3027	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	270.157009750544	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063813	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074535_72075346_72075475_72075733_72075941_72076136
ES.33213.68	chr8	+	3087	12	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_10	263.79221098909	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063813	72077555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075681_72075941_72076136
ES.33213.7	chr8	+	5999	29	Fusion	ENSMUSG00000034807.10_ENSMUSG00000031807.11_ENSMUSG00000043243.16	novel	1561	10	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_11	418.939944736615	1152	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72044820	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72051721_72051853_72052713_72052840_72053058_72053174_72054742_72054911_72055016_72055133_72055204_72055310_72055407_72055571_72056280_72056472_72056564_72056724_72057381_72057499_72057571_72058363_72059304_72059389_72060148_72060376_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.70	chr8	+	5849	8	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	4	-3	intron_retention	FALSE	canonical	3	838	junction_5	60.1728801887036	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAAGTCTTTGGGTTT	NA	False	NA	22	True	ATTAAA	-14	NA	72063818	72077547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72072416_72073244_72073322_72073391_72073499_72074407_72075941_72076136
ES.33213.71	chr8	+	1568	9	ISM	ENSMUSG00000034807.10	ENSMUST00000212216.2	1894	11	7	1332	7	-1332	5prime_fragment	FALSE	canonical	3	838	junction_7	53.4916757542704	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGCTCACTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	72063821	72074835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407
ES.33213.72	chr8	+	4478	9	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	7	1	intron_retention	FALSE	canonical	3	838	junction_6	57.9978447875436	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063821	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075941_72076136
ES.33213.73	chr8	+	3061	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	264.524366544687	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063827	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064881_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.74	chr8	+	1612	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	270.157009750544	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGCGTGCCTTCTCTGT	NA	False	NA	NA	False	AATACA	-21	NA	72063827	72076167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075367_72075475_72075733_72075941_72076136
ES.33213.75	chr8	+	2860	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_11	263.678335217002	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAAGTCTTTGGGTTT	NA	False	NA	22	True	ATTAAA	-14	NA	72063828	72077547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075789_72076136
ES.33213.76	chr8	+	3503	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	265.381808216448	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063828	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72075475_72075733_72075941_72076136
ES.33213.77	chr8	+	3960	10	NNC	ENSMUSG00000034807.10	novel	1894	11	NA	NA	14	-2	intron_retention	FALSE	canonical	3	17	junction_9	282.393517569777	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063828	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859
ES.33213.78	chr8	+	4534	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	14	-2	intron_retention	FALSE	canonical	3	838	junction_6	62.733612783256	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGTCTTTGGGTTTG	NA	False	NA	23	True	ATTAAA	-15	NA	72063828	72077548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.79	chr8	+	4166	10	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	14	1	intron_retention	FALSE	canonical	0	0	junction_2	377.682635078059	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063828	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065539_72065672_72070193_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72075941_72076136
ES.33213.8	chr8	+	6376	5	NIC	ENSMUSG00000031807.11	novel	1451	8	NA	NA	-3	29	intron_retention	FALSE	canonical	3	11	junction_4	272.207067321919	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGATGTGGTGGAGCATG	NA	False	NA	NA	False	GATAAA	-2	NA	72044824	72053765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72052840_72053058
ES.33213.80	chr8	+	3471	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	14	-3	intron_retention	FALSE	canonical	3	17	junction_8	352.833536008457	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAAGTCTTTGGGTTT	NA	False	NA	22	True	ATTAAA	-14	NA	72063828	72077547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.81	chr8	+	4775	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	15	-1	intron_retention	FALSE	canonical	3	748	junction_7	82.3463027721762	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063829	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.83	chr8	+	3402	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	264.539550074689	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72063829	72077550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074929_72075346_72075475_72075733_72075941_72076136
ES.33213.84	chr8	+	3068	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	270.157009750544	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063830	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075294_72075475_72075733_72075941_72076136
ES.33213.85	chr8	+	6482	7	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	-2	intron_retention	FALSE	canonical	3	843	junction_4	62.224727132119	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063831	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.86	chr8	+	3725	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	1	intron_retention	FALSE	canonical	1	1	junction_10	269.876004585883	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72063831	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075759_72075852_72075941_72076136
ES.33213.87	chr8	+	2454	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	666	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	344.974505901845	979	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAGAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	72063831	72076833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72069204_72069364_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.88	chr8	+	3811	10	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_5	387.435155864823	992	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	False	NA	24	True	ATTAAA	-16	NA	72063831	72077549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070924_72072295_72072416_72073391_72073499_72074407_72074541_72074859_72075475_72075733_72075941_72076136
ES.33213.89	chr8	+	3026	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	269.217200093988	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72063831	72077550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064089_72064727_72064839_72065539_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.91	chr8	+	2912	11	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	38	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	282.108507493128	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGTCTTTGGGTTTG	NA	False	NA	23	True	ATTAAA	-15	NA	72063852	72077548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.92	chr8	+	3215	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	263.312120357709	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72063870	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064328_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.93	chr8	+	3824	11	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	253	-2	intron_retention	FALSE	canonical	2	7	junction_1	275.347126369606	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTGGGTTTGGTGCC	NA	False	NA	28	True	ATTAAA	-20	NA	72064067	72077553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72064328_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075475_72075733_72075941_72076136
ES.33213.94	chr8	+	4662	11	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	1085	-1901	912	1901	3prime_fragment	FALSE	canonical	3	748	junction_8	70.5963880095859	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAAATAGTGCAAAACAT	NA	False	NA	NA	False	AATAAA	-24	NA	72064726	72079456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.95	chr8	+	4290	8	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	7074	-1891	-2611	1891	3prime_fragment	FALSE	canonical	3	748	junction_5	82.577854421245	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACCAAAAAGTCAAAATAG	NA	False	NA	NA	False	AATAAA	-14	NA	72070715	72079446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.96	chr8	+	3447	6	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	-1462	1	intron_retention	FALSE	canonical	3	748	junction_3	94.5587647973471	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72071864	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ES.33213.97	chr8	+	3350	3	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	9581	4	-104	1	intron_retention	FALSE	canonical	3	838	junction_1	2.5	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTCTTTGGGTTTGGTG	NA	False	NA	26	True	ATTAAA	-18	NA	72073222	72077551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72073322_72073391_72073499_72074407
ES.33214.1	chr8	+	1884	3	Antisense	novelGene_ENSMUSG00000034799.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGGGCCCTGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	72115185	72118152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_72115573_72115806_72116923_72117771
ES.33215.1	chr8	+	3519	24	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	-5729	-243	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	53.1284778690349	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTTGTCAGCACCTCTG	NA	False	NA	28	True	ATTAAA	-20	NA	72123210	72140957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72123252_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.10	chr8	+	1713	6	ISM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-7	8155	-7	95	5prime_fragment	FALSE	canonical	3	211	junction_4	16.5939748101532	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCAGCTACTGCCTGTC	NA	False	NA	NA	False	NA	NA	NA	72128932	72133045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202
ES.33215.11	chr8	+	3674	23	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	0	-247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	54.6506750277774	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCGGTTGTCAGCACC	NA	False	NA	24	True	ATTAAA	-16	NA	72128939	72140953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131821_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.12	chr8	+	4062	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	53.9062973027168	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72128941	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132537_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.13	chr8	+	3320	22	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	6	-251	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	53.8547218520311	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72128945	72140949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.15	chr8	+	5337	17	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	35	-251	intron_retention	FALSE	canonical	3	198	junction_15	21.7801515146245	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72128974	72140949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131734_72131845_72133639_72134144_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.17	chr8	+	4314	24	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-82	-249	intron_retention	FALSE	canonical	2	5	junction_22	64.4636736262471	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	22	True	ATTAAA	-14	NA	72129113	72140951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683
ES.33215.18	chr8	+	4432	24	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-82	1	intron_retention	FALSE	canonical	3	22	junction_10	50.224599520309	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72129113	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.19	chr8	+	4177	23	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-82	-248	intron_retention	FALSE	canonical	3	157	junction_10	24.7775224716821	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGCGGTTGTCAGCAC	NA	False	NA	23	True	ATTAAA	-15	NA	72129113	72140952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.2	chr8	+	6243	24	FSM	ENSMUSG00000079019.3_ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-214	-2020	-214	1	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72128725	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.21	chr8	+	3872	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-73	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	64.1292098466491	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCCCCCCTGGGAA	NA	False	NA	12	True	AATAAA	-15	NA	72129122	72143221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140845_72142815
ES.33215.22	chr8	+	4618	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	191	-790	-65	790	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAATCTTATAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	72129130	72144009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.23	chr8	+	3792	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-65	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	54.2451834779417	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72129130	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134958_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.24	chr8	+	3584	24	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-47	-249	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_16	52.2900518971841	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	22	True	ATTAAA	-14	NA	72129148	72140951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137046_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.25	chr8	+	4748	23	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-47	1	intron_retention	FALSE	canonical	3	125	junction_22	32.4677844146069	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72129148	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.26	chr8	+	7042	22	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_10	50.6411052599577	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129155	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134975_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.27	chr8	+	4821	22	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-39	-3	intron_retention	FALSE	canonical	3	125	junction_21	33.1769802444495	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72129156	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.28	chr8	+	4988	24	FSM	ENSMUSG00000079019.3_ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	218	-1197	-38	-471	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCAAAGTCGCGGAAT	NA	False	NA	NA	False	NA	NA	NA	72129157	72142397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.29	chr8	+	3835	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_16	54.0914862884067	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72129157	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137046_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.3	chr8	+	6908	22	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-212	-3	intron_retention	FALSE	canonical	3	22	junction_9	48.5081286873946	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72128727	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.30	chr8	+	4211	22	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-38	-251	intron_retention	FALSE	canonical	3	22	junction_9	48.5081286873946	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72129157	72140949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.31	chr8	+	3590	24	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-38	-249	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	51.8412948215153	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	22	True	ATTAAA	-14	NA	72129157	72140951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132537_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.32	chr8	+	8341	20	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-33	-1	intron_retention	FALSE	canonical	0	0	junction_2	53.234546090926	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129162	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131163_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137950_72138028_72138219_72138392_72138518_72138596_72139617_72139882
ES.33215.33	chr8	+	3461	24	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-33	-247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	53.5581587669927	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCGGTTGTCAGCACC	NA	False	NA	24	True	ATTAAA	-16	NA	72129162	72140953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132280_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.34	chr8	+	7824	18	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-33	-3	intron_retention	FALSE	canonical	0	0	junction_13	56.1002562768234	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72129162	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72135058_72135543_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137928_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.36	chr8	+	4977	20	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-32	-251	intron_retention	FALSE	canonical	3	22	junction_8	48.5324234083119	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72129163	72140949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.37	chr8	+	7226	21	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	6	junction_14	51.9300250336932	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72129163	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137046_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.38	chr8	+	4499	23	ISM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	224	-24	-32	22	intron_retention	FALSE	canonical	3	153	junction_6	25.5474360279717	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGGGGGTGTAGAAGAG	NA	False	NA	20	True	AATAGA	-19	NA	72129163	72141224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.39	chr8	+	3490	24	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-32	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	53.5714634980532	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTCTGCGCGGTTGTC	NA	False	NA	18	True	ATTAAA	-10	NA	72129163	72140947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134186_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.4	chr8	+	4152	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-174	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.3463840031327	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72128765	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134186_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.40	chr8	+	3778	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.2117289878127	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129167	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131853_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.42	chr8	+	3713	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.2980403259364	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129167	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132280_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.43	chr8	+	3612	23	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-27	-249	intron_retention	FALSE	canonical	3	22	junction_10	49.3993885263457	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	22	True	ATTAAA	-14	NA	72129168	72140951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.44	chr8	+	7486	19	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-17	0	intron_retention	FALSE	canonical	3	198	junction_18	16.4445382880205	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129178	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.45	chr8	+	4454	23	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-16	0	intron_retention	FALSE	canonical	3	125	junction_22	32.4305997732526	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129179	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.46	chr8	+	6570	21	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-8	0	intron_retention	FALSE	canonical	3	157	junction_9	25.6843824142221	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129187	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.47	chr8	+	4444	24	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_4	68.1757430987734	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129188	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131798_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140845_72142815
ES.33215.48	chr8	+	3428	23	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	-7	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.7967791298278	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGCGCGGTTGTCA	NA	False	NA	19	True	ATTAAA	-11	NA	72129188	72140948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131621_72131734_72131845_72131992_72132202_72132537_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.5	chr8	+	4195	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-164	-22	-164	20	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTGGGGGTGTAGAAG	NA	False	NA	18	True	AATAGA	-17	NA	72128775	72141222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.50	chr8	+	7522	17	Fusion	ENSMUSG00000079019.3_ENSMUSG00000031805.18	novel	4009	24	NA	NA	-3	-21	intron_retention	FALSE	canonical	3	198	junction_16	16.9244645410128	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAATAAAAAAGCAACTTC	NA	False	NA	-11	True	AAAAAG	-2	NA	72129192	72143198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131992_72132202_72133639_72134144_72134332_72134706_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.51	chr8	+	4628	21	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-3	0	intron_retention	FALSE	canonical	3	22	junction_8	53.7187118237212	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129192	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.52	chr8	+	3785	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	54.9770153993669	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72129194	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139641_72139882_72139994_72140683_72140807_72142815
ES.33215.54	chr8	+	3232	22	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	3	-248	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	56.0059520646392	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCGCGGTTGTCAGCAC	NA	False	NA	23	True	ATTAAA	-15	NA	72129198	72140952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.55	chr8	+	3892	26	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	72.8082412917659	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129199	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683_72140807_72142815
ES.33215.56	chr8	+	4277	21	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	8	-251	intron_retention	FALSE	canonical	3	22	junction_8	49.6641470278107	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGCGCGGTTGTCAG	NA	False	NA	20	True	ATTAAA	-12	NA	72129203	72140949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.57	chr8	+	7125	21	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	8	0	intron_retention	FALSE	canonical	3	22	junction_9	47.3427924820664	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129203	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.58	chr8	+	3464	24	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.2002027337994	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129203	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131987_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.59	chr8	+	4418	23	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	14	0	intron_retention	FALSE	canonical	3	125	junction_22	32.3985064955238	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129209	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.6	chr8	+	4061	25	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-164	-250	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	63.9239864344103	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72128775	72140950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683
ES.33215.60	chr8	+	7115	21	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_4	53.4346329640244	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129209	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131853_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.61	chr8	+	7032	22	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	15	-1	intron_retention	FALSE	canonical	3	22	junction_10	46.2081949324096	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72129210	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.62	chr8	+	3973	22	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	15	-250	intron_retention	FALSE	canonical	0	0	junction_7	82.7914627474045	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72129210	72140950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133531_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137109_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139882_72139994_72140683
ES.33215.63	chr8	+	5505	15	NIC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	15	-249	intron_retention	FALSE	canonical	0	0	junction_4	60.6698997419138	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGCGGTTGTCAGCA	NA	False	NA	22	True	ATTAAA	-14	NA	72129210	72140951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72132202_72133639_72134144_72135058_72135543_72135629_72135975_72136104_72136596_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.64	chr8	+	4661	22	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	15	0	intron_retention	FALSE	canonical	3	125	junction_21	33.1652223389067	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129210	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.67	chr8	+	3801	24	ISM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	1962	1	-77	-1	3prime_fragment	FALSE	canonical	3	125	junction_23	34.198188081431	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72130901	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.68	chr8	+	4343	19	NIC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	-9	-250	intron_retention	FALSE	canonical	3	157	junction_6	26.5753645318366	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72130969	72140950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72131166_72131320_72131445_72131621_72131992_72132202_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.69	chr8	+	4262	20	NIC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	-9	-252	intron_retention	FALSE	canonical	3	157	junction_8	25.9169780393571	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGCGCGGTTGTCA	NA	False	NA	19	True	ATTAAA	-11	NA	72130969	72140948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.7	chr8	+	3929	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	-162	242	-162	-242	multi-exon	FALSE	canonical	3	153	junction_6	28.4113052926296	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTCAGCACCTCTGG	NA	False	NA	29	True	ATTAAA	-21	NA	72128777	72140958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.70	chr8	+	3479	23	ISM	ENSMUSG00000031805.18	ENSMUST00000110012.2	3774	24	775	247	-9	-245	3prime_fragment	FALSE	canonical	3	153	junction_5	28.5971231865279	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCGGTTGTCAGCACCTC	NA	False	NA	26	True	ATTAAA	-18	NA	72130969	72140955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.71	chr8	+	3818	23	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	125	junction_22	34.9541908008962	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72130969	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.72	chr8	+	6332	22	Fusion	ENSMUSG00000079019.3_ENSMUSG00000031805.18	novel	3774	24	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	157	junction_9	24.9531079501509	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72130969	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.73	chr8	+	4319	23	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	22	junction_9	50.9205344281291	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72130969	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.75	chr8	+	4065	21	NIC	ENSMUSG00000031805.18	novel	3774	24	NA	NA	400	3	intron_retention	FALSE	canonical	3	157	junction_8	24.4791237588276	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGGTTTGTGACTGG	NA	False	NA	1	True	AATGAA	-9	NA	72131378	72141205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.76	chr8	+	3414	22	ISM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	2681	1	642	-1	3prime_fragment	FALSE	canonical	3	125	junction_21	34.5031465258084	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72131620	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.77	chr8	+	6694	16	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	890	1	intron_retention	FALSE	canonical	0	0	junction_2	59.3514579058978	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72131868	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72131992_72132202_72133639_72134186_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.78	chr8	+	2827	18	ISM	ENSMUSG00000031805.18	ENSMUST00000110012.2	3774	24	2104	915	1320	-913	internal_fragment	FALSE	canonical	3	153	junction_1	26.3455872092069	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTTGAAGCCAGGGT	NA	False	NA	NA	False	NA	NA	NA	72132298	72140287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.79	chr8	+	5771	19	Fusion	ENSMUSG00000079019.3_ENSMUSG00000031805.18	novel	3774	24	NA	NA	1343	-3	intron_retention	FALSE	canonical	2	5	junction_17	70.2194092263583	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72132321	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683
ES.33215.80	chr8	+	3816	18	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1363	-1	intron_retention	FALSE	canonical	0	0	junction_6	87.0954612891087	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72132341	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72133202_72133283_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135720_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140845_72142815
ES.33215.81	chr8	+	3181	21	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1711	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	79.7332270762949	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72132689	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683_72140807_72142815
ES.33215.82	chr8	+	3418	16	NIC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1720	9	intron_retention	FALSE	canonical	3	157	junction_3	27.8684209974101	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTGACTGGAGTTGG	NA	False	NA	7	True	AATAGA	-6	NA	72132698	72141211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.83	chr8	+	2766	19	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1727	-250	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	56.4131584335113	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCGCGGTTGTCAGC	NA	False	NA	21	True	ATTAAA	-13	NA	72132705	72140950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.84	chr8	+	3193	18	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1739	0	intron_retention	FALSE	canonical	1	4	junction_1	60.2523528234479	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72132717	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133639_72134144_72134332_72134706_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.86	chr8	+	3013	20	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1779	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	72.4006244138299	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTTTCCCCCCTGGGA	NA	False	NA	11	True	AATAAA	-14	NA	72132757	72143220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140845_72142815
ES.33215.87	chr8	+	2896	18	NNC	ENSMUSG00000031805.18	novel	4009	24	NA	NA	1779	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.321348764849	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCTGCGCGGTTGTCA	NA	False	NA	19	True	ATTAAA	-11	NA	72132757	72140948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134958_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.88	chr8	+	4979	19	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1779	0	intron_retention	FALSE	canonical	1	4	junction_1	70.3824867736601	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72132757	72143219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.89	chr8	+	4997	18	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	1847	-3	intron_retention	FALSE	canonical	1	4	junction_1	58.0471708909479	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACTTTTTTTCCCCCCT	NA	False	NA	7	True	AATAAA	-10	NA	72132825	72143216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72132862_72133078_72133202_72133283_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.9	chr8	+	4031	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	-10	-2	-10	2	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCCCCCCTGGGAA	NA	False	NA	12	True	AATAAA	-15	NA	72128929	72143221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ES.33215.90	chr8	+	4623	14	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	3838	-1	intron_retention	FALSE	canonical	0	0	junction_1	95.6932970515266	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	NA	False	NA	9	True	AATAAA	-12	NA	72134816	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72134832_72134975_72135058_72135543_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140071_72140210_72140683
ES.33215.91	chr8	+	3997	11	ISM	ENSMUSG00000031805.18	ENSMUST00000130624.2	4049	22	4938	-332	4938	-19	intron_retention	FALSE	canonical	3	198	junction_9	22.3740921603537	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAAGCAACTTCAT	62	False	NA	-9	True	AAAAAG	-4	NA	72135916	72143200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.92	chr8	+	1702	10	NNC	ENSMUSG00000031805.18	novel	4049	22	NA	NA	5882	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	101.095969562235	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	1006	False	NA	9	True	AATAAA	-12	NA	72136860	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72137013_72137127_72137279_72137809_72137928_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140845_72142815
ES.33215.93	chr8	+	3394	7	ISM	ENSMUSG00000031805.18	ENSMUST00000130624.2	4049	22	6829	-350	6829	-1	intron_retention	FALSE	canonical	3	198	junction_5	25.6931681364694	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	1953	False	NA	9	True	AATAAA	-12	NA	72137807	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.94	chr8	+	3065	5	ISM	ENSMUSG00000031805.18	ENSMUST00000130624.2	4049	22	7411	-350	7411	-1	intron_retention	FALSE	canonical	3	198	junction_3	31.2209865314983	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	2535	False	NA	9	True	AATAAA	-12	NA	72138389	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ES.33215.95	chr8	+	3755	4	ISM	ENSMUSG00000031805.18	ENSMUST00000130624.2	4049	22	7411	-350	7411	-1	intron_retention	FALSE	canonical	3	198	junction_3	19.4821855949366	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	2535	False	NA	9	True	AATAAA	-12	NA	72138389	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72138518_72138596_72138770_72139498_72139617_72139882
ES.33215.96	chr8	+	3951	1	NIC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	8289	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTTTTTCCCCCCTGG	620	False	NA	9	True	AATAAA	-12	NA	72139267	72143218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72139300_72143200
ES.33216.1	chr8	+	3062	2	Genic_Genomic	ENSMUSG00000110438.2	novel	407	1	NA	NA	-2687	306	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGCCAGCATTTAGTTT	891	False	NA	NA	False	AATAAA	-19	NA	72145564	72148964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_72145698_72146035
ES.33217.1	chr8	-	109	2	Intergenic	novelGene_27053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	72063126	72062949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72062991_72063058
ES.33218.1	chr8	-	2357	1	Antisense	novelGene_ENSMUSG00000034807.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCGAAATGGCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	72065594	72063237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72063200_72065600
ES.33219.1	chr8	-	7888	42	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	66	-2304	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	16.3266040923937	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAAACTGGCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	72124314	72079364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72106682_72106749_72107447_72107668_72107776_72107849_72108306_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.11	chr8	-	4374	33	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	382	117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	3.68644052576466	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTGTCCTTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	72110757	72081580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72106682_72106749_72107447_72107668_72107776_72107849_72108303_72108386_72108898_72108946_72110646
ES.33219.13	chr8	-	5676	41	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	2	115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	16.3412820794453	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTCTGTCCTTGCCC	NA	False	NA	NA	False	NA	NA	NA	72124383	72081582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108303_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.14	chr8	-	6123	41	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	69	113	intron_retention	FALSE	canonical	1	3	junction_6	16.3465592709903	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTTCTGTCCTTGC	NA	False	NA	NA	False	NA	NA	NA	72124311	72081584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72106682_72106749_72107447_72107668_72107776_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.15	chr8	-	3444	27	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	4971	-124	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	3.42480509530519	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACGCGCCCTCGGCGCA	NA	False	NA	NA	False	AATACA	-22	NA	72106168	72081821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031
ES.33219.16	chr8	-	149	1	Intergenic	novelGene_27054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAGGAAGGATGCCCA	NA	False	NA	NA	False	NA	NA	NA	72106889	72106740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72106700_72106900
ES.33219.17	chr8	-	3908	4	NIC	ENSMUSG00000034799.17	novel	944	8	NA	NA	2	2	intron_retention	FALSE	canonical	3	45	junction_2	2.94392028877595	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGTTATATATAACAAG	NA	False	NA	0	True	NA	NA	NA	72124378	72112987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72115573_72115806_72116921_72118622_72118723_72124269
ES.33219.18	chr8	-	3029	5	NIC	ENSMUSG00000034799.17	novel	944	8	NA	NA	8	1	intron_retention	FALSE	canonical	3	45	junction_3	2.58602010819715	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTATATATAACAA	NA	False	NA	-1	True	NA	NA	NA	72124372	72112988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.19	chr8	-	1262	8	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_6	23.0863507691609	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTATATATAACAA	NA	False	NA	-1	True	NA	NA	NA	72124373	72112988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72113294_72114462_72114496_72115124_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72119284_72119315_72124269
ES.33219.2	chr8	-	3472	4	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	8608	-2311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.0184900284226	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCCCTGAAACTGG	NA	False	NA	NA	False	NA	NA	NA	72085433	72079371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72085210
ES.33219.20	chr8	-	2817	7	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	32	1	intron_retention	FALSE	canonical	0	0	junction_5	21.095023109729	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTATATATAACAA	NA	False	NA	-1	True	NA	NA	NA	72124348	72112988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72113397_72113477_72114462_72115573_72115806_72116921_72118622_72118723_72119284_72119315_72124269
ES.33219.21	chr8	-	939	8	FSM	ENSMUSG00000034799.17	ENSMUST00000176777.8	944	8	1	4	1	1	multi-exon	FALSE	canonical	2	5	junction_3	16.3682120998886	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGTGTTATATATAACAA	NA	False	NA	-1	True	NA	NA	NA	72124384	72112988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.22	chr8	-	2275	7	NNC	ENSMUSG00000034799.17	novel	2569	7	NA	NA	35	0	intron_retention	FALSE	canonical	2	4	junction_4	21.6159663212173	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTGTGTTATATATAACA	NA	False	NA	-2	True	NA	NA	NA	72124345	72112989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72113397_72113477_72114462_72115931_72116802_72116921_72117769_72117900_72118622_72118723_72124269
ES.33219.23	chr8	-	1062	9	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	20.6397674405503	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTGTGTTATATATAACA	NA	False	NA	-2	True	NA	NA	NA	72124393	72112989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72117769_72117900_72118622_72118723_72124269
ES.33219.24	chr8	-	1011	9	NNC	ENSMUSG00000034799.17	novel	944	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	21.2117302453147	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTGTGTTATATATAACA	NA	False	NA	-2	True	NA	NA	NA	72124378	72112989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72113397_72113477_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.25	chr8	-	3094	5	NNC	ENSMUSG00000034799.17	novel	944	8	NA	NA	8	-1	intron_retention	FALSE	canonical	2	4	junction_2	25.3118055460293	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGTGTTATATATAAC	NA	False	NA	-3	True	NA	NA	NA	72124372	72112990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72114462_72116921_72117769_72117900_72118622_72118723_72124269
ES.33219.26	chr8	-	937	8	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	966	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.872564769181	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTGTGTTATATATAAC	NA	False	NA	-3	True	NA	NA	NA	72123414	72112990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72123284
ES.33219.27	chr8	-	1057	9	NNC	ENSMUSG00000034799.17	novel	944	8	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	23.1702260455094	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACGTGTGTTATATATAA	NA	False	NA	-4	True	NA	NA	NA	72124375	72112991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72117769_72117900_72118622_72118723_72124269
ES.33219.28	chr8	-	1098	8	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	15.6570385815089	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACGTGTGTTATATATAA	NA	False	NA	-4	True	NA	NA	NA	72124378	72112991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113477_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.29	chr8	-	3207	6	NNC	ENSMUSG00000034799.17	novel	944	8	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_3	19.2707031527134	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACGTGTGTTATATATAA	NA	False	NA	-4	True	NA	NA	NA	72124372	72112991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72113397_72113477_72114462_72116921_72117734_72117900_72118622_72118723_72124269
ES.33219.3	chr8	-	3820	9	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	-513	2276	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	72094554	72079421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72092343_72092468_72093999_72094153_72094496
ES.33219.30	chr8	-	982	9	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	18.6677362044786	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTACGTGTGTTATATATA	NA	False	NA	-5	True	NA	NA	NA	72124367	72112992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72113397_72113477_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.31	chr8	-	2104	7	NNC	ENSMUSG00000034799.17	novel	944	8	NA	NA	-34	-3	intron_retention	FALSE	canonical	0	0	junction_4	24.7414407197497	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTACGTGTGTTATATATA	NA	False	NA	-5	True	NA	NA	NA	72124435	72112992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72113294_72114462_72115573_72115806_72115931_72116802_72116921_72117734_72117920_72118622_72118723_72124269
ES.33219.32	chr8	-	909	8	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	3.4166459266004	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGGTACGTGTGTTAT	NA	False	NA	-10	True	NA	NA	NA	72124378	72112997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.33	chr8	-	2374	1	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	2	-9015	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGATATA	NA	False	NA	NA	False	NA	NA	NA	72124378	72122004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72122000_72124400
ES.33219.4	chr8	-	6126	41	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	22	593	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	16.3412820794453	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGGTTTGTGTGACTG	NA	False	NA	NA	False	TATAAA	-23	NA	72124358	72081104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108306_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.6	chr8	-	5609	31	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	-914	335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	3.38312807259133	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTTGAACCACAGCAT	NA	False	NA	NA	False	GATAAA	-19	NA	72112053	72081362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108303_72108386_72108898_72108946_72110646_72110756_72110899
ES.33219.8	chr8	-	5612	39	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	1	119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.5171991280608	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTCCTTGCCCTTCC	NA	False	NA	NA	False	NA	NA	NA	72124384	72081578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108303_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.33219.9	chr8	-	5672	41	NNC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	8	119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	16.5408585025083	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGTCCTTGCCCTTCC	NA	False	NA	NA	False	NA	NA	NA	72124372	72081578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092337_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095738_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108303_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ES.3322.1	chr10	+	230	1	Intergenic	novelGene_2576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGACACTCTCGCTAT	2267	False	NA	NA	False	NA	NA	NA	80181988	80182218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80182000_80182200
ES.33220.1	chr8	-	233	1	Intergenic	novelGene_27055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACAAAGTCATTTGT	9406	False	NA	NA	False	NA	NA	NA	72127400	72127167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72127200_72127400
ES.33221.1	chr8	-	1722	1	Antisense	novelGene_ENSMUSG00000031805.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGGTACTCTTTTTTTT	7492	False	NA	NA	False	ATTAAA	-16	NA	72129314	72127592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72127600_72129300
ES.33222.1	chr8	-	4294	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-17	-1222	-17	1222	multi-exon	FALSE	canonical	3	105	junction_2	27	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGACTCCAGTCTTTGCT	8504	False	NA	NA	False	ATTAAA	-14	NA	72154450	72142177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.10	chr8	-	3601	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-157	313	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	72.6146602890139	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTGGATTGTTGCAAT	8364	False	NA	-2	True	AATAAA	-17	NA	72154590	72143086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72154361
ES.33222.12	chr8	-	2724	2	NIC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	38	-454	intron_retention	FALSE	canonical	3	105	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8559	False	NA	-3	True	NA	NA	NA	72154395	72143853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72146544_72154361
ES.33222.13	chr8	-	2642	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-697	-454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.3590863871379	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	7824	False	NA	-3	True	NA	NA	NA	72155130	72143853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72155093
ES.33222.14	chr8	-	2690	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1786	-455	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGGTAATATTTCTGTT	6735	False	NA	-4	True	NA	NA	NA	72156219	72143854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156057
ES.33222.15	chr8	-	2688	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-13	-456	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	72.6146602890139	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCCCGGTAATATTTCTGT	8508	False	NA	-5	True	NA	NA	NA	72154446	72143855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72154361
ES.33222.17	chr8	-	2721	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.3590863871379	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCCGGTAATATTTCTG	6778	False	NA	-6	True	NA	NA	NA	72156176	72143856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72156057
ES.33222.18	chr8	-	2622	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-304	-457	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	77.5	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCCCGGTAATATTTCTG	8217	False	NA	-6	True	NA	NA	NA	72154737	72143856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72154641
ES.33222.19	chr8	-	1610	2	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	8030	-458	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCCCGGTAATATTTCT	NA	False	NA	-7	True	NA	NA	NA	72146403	72143857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145423_72146358
ES.33222.20	chr8	-	2723	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-310	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.015149776396	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCGCCCGGTAATATTTC	8211	False	NA	-8	True	NA	NA	NA	72154743	72143858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72154361_72154459_72154641
ES.33222.21	chr8	-	9493	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-13	-460	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	73.3590863871379	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGCCCGGTAATATTT	8508	False	NA	-9	True	NA	NA	NA	72154446	72143859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72150758_72150823
ES.33222.22	chr8	-	2584	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	5	-460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.5	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGCCCGGTAATATTT	8526	False	NA	-9	True	NA	NA	NA	72154428	72143859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146538_72154361
ES.33222.23	chr8	-	2532	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-40	563	-40	-563	multi-exon	FALSE	canonical	3	105	junction_2	27	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCTGGCTGTCTTGGAA	8481	False	NA	NA	False	NA	NA	NA	72154473	72143962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.24	chr8	-	2230	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-39	864	-39	-864	multi-exon	FALSE	canonical	3	105	junction_2	27	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTCTTCTTCGAGG	8482	False	NA	80	True	NA	NA	NA	72154472	72144263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.25	chr8	-	2159	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1747	-947	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACCTGCTGTTACTGTT	6774	False	NA	-3	True	NA	NA	NA	72156180	72144346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156057
ES.33222.26	chr8	-	2251	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-162	966	-162	-966	multi-exon	FALSE	canonical	3	105	junction_2	27	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGGTAATGTTACTTT	8359	False	NA	-22	True	NA	NA	NA	72154595	72144365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.27	chr8	-	2344	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-180	-967	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	72.6146602890139	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGGTAATGTTACTT	8341	False	NA	-23	True	NA	NA	NA	72154613	72144366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72154361
ES.33222.28	chr8	-	2201	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-157	-967	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	51	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGGTAATGTTACTT	8364	False	NA	-23	True	NA	NA	NA	72154590	72144366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145756_72145960_72146544_72154361
ES.33222.29	chr8	-	1700	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-1378	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	75.5	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTCAGGGCTCTGCCA	6778	False	NA	NA	False	AATAAA	-43	NA	72156176	72144777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156081
ES.33222.3	chr8	-	4324	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1745	1220	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGACTCCAGTCTTTG	6776	False	NA	NA	False	ATTAAA	-12	NA	72156178	72142179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156057
ES.33222.30	chr8	-	1684	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-34	1405	-34	-1405	multi-exon	FALSE	canonical	3	105	junction_2	27	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGATTGTAGGGGGAAG	8487	False	NA	NA	False	AATAAA	-16	NA	72154467	72144804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.31	chr8	-	1473	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	52	-1530	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTCAGAGATCTTGAC	8573	False	NA	NA	False	TTTAAA	-4	NA	72154381	72144929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145756_72145960_72146544_72154317
ES.33222.32	chr8	-	1842	1	FSM	ENSMUSG00000110569.2	ENSMUST00000212029.2	764	1	-255	-823	-255	823	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCCTTGATCATGA	5087	False	NA	NA	False	NA	NA	NA	72157867	72156025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72156000_72157900
ES.33222.4	chr8	-	3942	2	ISM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	7980	-1049	7980	1049	3prime_fragment	FALSE	canonical	3	159	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGTGGCTTATAAACCG	NA	False	NA	NA	False	NA	NA	NA	72146453	72142350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_72145800_72145960
ES.33222.5	chr8	-	3424	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1747	318	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATTGTTGCAATGACAT	6774	False	NA	3	True	AATAAA	-22	NA	72156180	72143081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156057
ES.33222.6	chr8	-	3402	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1749	318	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	75.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATTGTTGCAATGACAT	6772	False	NA	3	True	AATAAA	-22	NA	72156182	72143081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72156081
ES.33222.7	chr8	-	3361	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	56	318	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	77	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATTGTTGCAATGACAT	8577	False	NA	3	True	AATAAA	-22	NA	72154377	72143081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72154317
ES.33222.8	chr8	-	3420	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	-50	-315	-50	315	multi-exon	FALSE	canonical	3	105	junction_2	27	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATTGTTGCAATGA	8471	False	NA	0	True	AATAAA	-19	NA	72154483	72143084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72145800_72145960_72146544_72154361
ES.33222.9	chr8	-	3493	4	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.3590863871379	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGATTGTTGCAATGA	6778	False	NA	0	True	AATAAA	-19	NA	72156176	72143084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72145800_72145960_72146544_72147410_72147487_72156057
ES.33223.1	chr8	-	178	1	Intergenic	novelGene_27056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	4056	False	NA	NA	False	NA	NA	NA	72158898	72158720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72158700_72158900
ES.33224.1	chr8	-	5311	25	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	19	1407	intron_retention	TRUE	non_canonical	2	5	junction_24	44.034077712608	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGCCATGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	72175972	72159623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72175878
ES.33224.10	chr8	-	3482	28	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	11	intron_retention	FALSE	non_canonical	0	0	junction_16	51.0892331060958	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173043_72173403_72173895_72173949_72174462_72174504_72178276
ES.33224.13	chr8	-	2955	28	FSM	ENSMUSG00000070000.14	ENSMUST00000146100.8	3188	28	-15	248	-15	11	multi-exon	FALSE	non_canonical	0	0	junction_17	36.1995308763152	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178375	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.14	chr8	-	3532	26	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-7	11	intron_retention	FALSE	non_canonical	0	0	junction_11	51.4315700713093	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178317	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165201_72165543_72165596_72165944_72165970_72166058_72166235_72166618_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.15	chr8	-	3208	30	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	6	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.4762303586106	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163677_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166235_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72171687_72171828_72173177_72173403_72173895_72173945_72174462_72174504_72178276
ES.33224.16	chr8	-	3109	29	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	6	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	49.9150809487719	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173177_72173403_72173895_72173949_72174462_72174504_72178276
ES.33224.17	chr8	-	3338	26	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	11	intron_retention	FALSE	non_canonical	0	0	junction_15	43.7614624984129	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.18	chr8	-	3424	25	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	0	11	intron_retention	FALSE	non_canonical	0	0	junction_15	38.1493546981976	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178310	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.19	chr8	-	2986	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-16091	11	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_15	54.3785945944596	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72194451	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72184457_72184558_72194400
ES.33224.2	chr8	-	3401	29	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	55.4252921526272	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCTGTGATTTTTGCC	NA	False	NA	-3	True	NA	NA	NA	72178321	72161034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173177_72173403_72173895_72173949_72174438_72174504_72178276
ES.33224.20	chr8	-	2860	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	15	11	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_17	45.3193794512475	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178333	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72174462_72174504_72178276
ES.33224.21	chr8	-	4083	23	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	3	11	intron_retention	FALSE	non_canonical	0	0	junction_12	39.5539437074221	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178307	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.22	chr8	-	5140	20	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	11	intron_retention	FALSE	non_canonical	0	0	junction_9	49.4712765371591	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.23	chr8	-	3140	27	FSM	ENSMUSG00000070000.14	ENSMUST00000143699.8	3351	27	-11	222	-11	11	multi-exon	FALSE	non_canonical	0	0	junction_16	36.8870216588966	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178321	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.24	chr8	-	3123	29	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-16210	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	49.5883436558493	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72194570	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72184457_72184555_72194400
ES.33224.25	chr8	-	2877	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-12	11	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_16	45.6053951962475	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178322	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.26	chr8	-	2756	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	2	11	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_16	49.4056304861211	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178308	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164722_72164832_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.27	chr8	-	2708	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	5	11	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_13	45.2512381732591	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178305	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.3	chr8	-	3135	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	51.4574684204482	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTGTGATTTTT	NA	False	NA	-6	True	NA	NA	NA	72178304	72161037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166235_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169411_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.30	chr8	-	7502	11	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	11	intron_retention	FALSE	canonical	0	0	junction_3	48.8892626248341	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72163937_72164036_72165209_72165543_72167417_72167526_72168218_72168328_72168428_72169200_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.31	chr8	-	2775	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-3	11	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_16	45.1972828685334	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178351	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.33	chr8	-	3339	26	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	0	11	intron_retention	FALSE	non_canonical	0	0	junction_15	46.6144012082103	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178310	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168419_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.34	chr8	-	3135	26	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-6	11	intron_retention	FALSE	non_canonical	0	0	junction_11	46.1965193494055	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178316	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165621_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.35	chr8	-	2894	27	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-12	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.7200284986477	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178322	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166688_72167335_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.38	chr8	-	3099	26	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	5	11	intron_retention	FALSE	non_canonical	0	0	junction_15	46.5060168150316	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178305	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.39	chr8	-	3158	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	5	11	intron_retention	FALSE	non_canonical	2	21	junction_16	33.8838295551941	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178355	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.4	chr8	-	3785	26	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_15	37.3892818866584	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTGTGATTTTT	NA	False	NA	-6	True	NA	NA	NA	72178317	72161037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.40	chr8	-	3404	26	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-13	11	intron_retention	TRUE	non_canonical	0	0	junction_20	44.3802839107638	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178323	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169608_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.41	chr8	-	3997	24	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-13	11	intron_retention	FALSE	non_canonical	0	0	junction_13	45.4933884558482	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178323	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.42	chr8	-	2924	27	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	8	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	55.7506069699227	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178340	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166235_72166617_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.43	chr8	-	3244	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	9	11	intron_retention	FALSE	non_canonical	1	2	junction_24	49.2248835776918	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178301	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72171687_72171828_72173895_72173949_72174462_72174504_72178276
ES.33224.44	chr8	-	2953	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-16142	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	55.847553621818	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72194502	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72184457_72184558_72194400
ES.33224.45	chr8	-	3838	24	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	3	3	intron_retention	FALSE	non_canonical	0	0	junction_13	38.7544253220402	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72178307	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.46	chr8	-	1840	18	NNC	ENSMUSG00000070000.14	novel	3073	26	NA	NA	-230	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.0858638171559	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72168427	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161406_72162273_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166237_72166620_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328
ES.33224.47	chr8	-	3666	26	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	3	intron_retention	FALSE	non_canonical	0	0	junction_15	37.5824639958585	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72178304	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.48	chr8	-	3667	24	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-14	3	intron_retention	FALSE	non_canonical	0	0	junction_13	48.0143330837207	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72178324	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168325_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.49	chr8	-	2959	28	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	2	3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_17	43.8551988212211	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72175989	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72175878
ES.33224.50	chr8	-	3079	30	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-16092	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	54.719020685064	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGAGGAATCCTCT	NA	False	NA	-12	True	AATAAA	-13	NA	72194452	72161293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72183327_72183407_72184457_72184558_72194400
ES.33224.52	chr8	-	3777	25	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_3	54.6301802781413	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATAAAGAGGAATCCT	NA	False	NA	-14	True	AATAAA	-11	NA	72178307	72161295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162416_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174438_72174504_72178276
ES.33224.53	chr8	-	3892	24	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	3	1	intron_retention	FALSE	non_canonical	2	21	junction_13	42.655963134435	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATAAAGAGGAATCCT	NA	False	NA	-14	True	AATAAA	-11	NA	72178345	72161295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.54	chr8	-	3419	27	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-8	1	intron_retention	FALSE	non_canonical	0	0	junction_16	45.2711750448431	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATAAAGAGGAATCCT	NA	False	NA	-14	True	AATAAA	-11	NA	72178318	72161295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164722_72164832_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.55	chr8	-	3114	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	44.4208270582979	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATAAAGAGGAATCCT	NA	False	NA	-14	True	AATAAA	-11	NA	72178364	72161295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174684_72178276
ES.33224.57	chr8	-	2887	27	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.7200284986477	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178323	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166699_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.6	chr8	-	3593	26	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	-1	intron_retention	FALSE	non_canonical	2	21	junction_15	34.5495817630257	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATAGCTGTGATTTT	NA	False	NA	-7	True	NA	NA	NA	72178304	72161038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.60	chr8	-	3508	26	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-3	0	intron_retention	FALSE	non_canonical	2	21	junction_15	34.3377576437367	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178313	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.63	chr8	-	4453	23	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	33	0	intron_retention	FALSE	non_canonical	0	0	junction_12	48.2707583916234	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72175958	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163937_72164036_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72175878
ES.33224.65	chr8	-	3543	25	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_14	38.3709054999864	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178304	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.66	chr8	-	3109	26	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_6	46.4975526237672	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178323	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163970_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.69	chr8	-	3129	24	NIC	ENSMUSG00000070000.14	novel	2966	26	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	54.7240542833064	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178310	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.70	chr8	-	3138	8	NIC	ENSMUSG00000070000.14	novel	2966	26	NA	NA	-1106	0	intron_retention	FALSE	canonical	3	121	junction_4	27.9788549896277	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72165929	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72163139_72163641_72163751_72163848_72163937_72164036_72164938_72165113_72165209_72165543
ES.33224.71	chr8	-	1502	9	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	52	0	intron_retention	FALSE	canonical	0	0	junction_3	58.821764679411	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72164771	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162644_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694
ES.33224.72	chr8	-	3769	25	NIC	ENSMUSG00000070000.14	novel	2966	26	NA	NA	-7	0	intron_retention	FALSE	non_canonical	2	21	junction_14	34.9946176417015	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178317	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.73	chr8	-	3674	23	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_14	48.6308408079271	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178320	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72178276
ES.33224.74	chr8	-	4637	17	NIC	ENSMUSG00000070000.14	novel	2966	26	NA	NA	-1683	0	intron_retention	FALSE	non_canonical	0	0	junction_9	44.0670210446542	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72170962	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72166236_72166618_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930
ES.33224.75	chr8	-	3686	24	NIC	ENSMUSG00000070000.14	novel	2966	26	NA	NA	-10	0	intron_retention	FALSE	non_canonical	2	21	junction_13	35.6636778894846	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178320	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.77	chr8	-	2960	28	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	403	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	44.4208270582979	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72175588	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72175473
ES.33224.78	chr8	-	2896	29	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_16	58.7585425834458	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178319	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164722_72164832_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72171687_72171828_72173895_72173949_72174462_72174504_72178276
ES.33224.79	chr8	-	2419	18	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	-218	0	intron_retention	FALSE	non_canonical	0	0	junction_11	53.6262214434094	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72168415	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328
ES.33224.8	chr8	-	3567	26	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-11	13	intron_retention	FALSE	non_canonical	0	0	junction_15	46.2335635658771	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCCTCTTTCCGGTTCA	NA	False	NA	-2	True	AATAAA	-23	NA	72178321	72161283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174438_72174504_72178276
ES.33224.80	chr8	-	3562	25	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_14	37.9341534767813	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178307	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.81	chr8	-	3532	26	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_15	37.3892818866584	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178323	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.83	chr8	-	2380	22	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	46.3211700375843	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178321	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166129_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
ES.33224.84	chr8	-	3520	25	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_11	47.1018215913379	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178321	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165629_72166058_72166236_72166618_72166679_72166915_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.85	chr8	-	2775	29	NNC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	43.6994022282003	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178317	72161296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164722_72164832_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33224.86	chr8	-	3461	27	NNC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	57.835322738038	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAACAAAATAAAGAGGAAT	NA	False	NA	-17	True	AATAAA	-8	NA	72178304	72161298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166688_72167335_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173043_72173403_72173895_72173949_72174462_72174504_72178276
ES.33224.9	chr8	-	2982	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	6	11	intron_retention	FALSE	non_canonical	0	0	junction_16	36.6727290129115	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAATCCTCTTTCCGGTT	NA	False	NA	-4	True	AATAAA	-21	NA	72178304	72161285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ES.33225.1	chr8	+	5061	1	Antisense	novelGene_ENSMUSG00000110685.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTTGAGCATGTGTC	8484	False	NA	NA	False	NA	NA	NA	72582171	72587232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_72582200_72587200
ES.33226.1	chr8	+	3452	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	-280	4014	-280	801	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATGTTTATACTGT	NA	False	NA	NA	False	NA	NA	NA	72635582	72645557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ES.33226.2	chr8	+	4692	3	FSM	ENSMUSG00000056019.13	ENSMUST00000188374.7	717	3	-336	-3639	-274	789	multi-exon	FALSE	canonical	3	20	junction_2	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGGCTTTATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	72635588	72645545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444
ES.33226.3	chr8	+	3472	4	NNC	ENSMUSG00000056019.13	novel	7186	4	NA	NA	-263	801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.03081145609604	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATGTTTATACTGT	NA	False	NA	NA	False	NA	NA	NA	72635599	72645557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72636053_72641107_72641235_72641407_72641506_72642763
ES.33226.4	chr8	+	7600	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	-66	-348	-66	348	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGAGTGATGGTTTTT	NA	False	NA	NA	False	AATATA	-22	NA	72635796	72649919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ES.33226.5	chr8	+	7185	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	0	1	0	-1	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCGCATGTTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	72635862	72649570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ES.33226.6	chr8	+	2923	4	NNC	ENSMUSG00000056019.13	novel	7186	4	NA	NA	0	801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.93310961716756	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGATGTTTATACTGT	NA	False	NA	NA	False	NA	NA	NA	72635924	72645557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72636053_72641107_72641235_72641444_72641506_72642950
ES.33226.7	chr8	+	3948	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	73	3165	11	1650	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTTTGTTTTTTTAG	NA	False	NA	NA	False	ATTAAA	-16	NA	72635935	72646406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ES.33226.8	chr8	+	4452	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	81	2653	19	2162	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTATGTTGAATAT	NA	False	NA	NA	False	NA	NA	NA	72635943	72646918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ES.33226.9	chr8	+	3829	1	NIC	ENSMUSG00000056019.13	novel	7186	4	NA	NA	1469	1649	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTTTGTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	72642576	72646405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72642600_72646400
ES.33227.1	chr8	+	3083	3	FSM	ENSMUSG00000089857.10	ENSMUST00000110002.8	3152	3	-2	71	-2	-71	multi-exon	FALSE	canonical	2	4	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	72662449	72670127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72662583_72666965_72667093_72667304
ES.33227.10	chr8	+	2949	4	NNC	ENSMUSG00000066880.16	novel	769	4	NA	NA	265	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	29.227080289044	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTAGTGTTCTATTGCT	NA	False	NA	27	True	AATAAA	-15	NA	72676960	72688471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72677029_72682045_72682173_72682981_72683127_72685862
ES.33227.11	chr8	+	4261	3	NNC	ENSMUSG00000066880.16	novel	769	4	NA	NA	3784	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTAGTGTTCTATTGCT	NA	False	NA	27	True	AATAAA	-15	NA	72680479	72688471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72680855_72680895_72682173_72685862
ES.33227.12	chr8	+	4266	1	Genic_Genomic	ENSMUSG00000066880.16	novel	NA	NA	NA	NA	10671	3159	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTGAGTGGCTCTTT	164	False	NA	NA	False	NA	NA	NA	72687366	72691632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_72687400_72691600
ES.33227.2	chr8	+	3018	5	NIC	ENSMUSG00000066880.16	novel	769	4	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	26.7348087705897	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTCTATTGCTGTGA	NA	False	NA	31	True	AATAAA	-19	NA	72662492	72688475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72662583_72666965_72667093_72682045_72682173_72682981_72683043_72685862
ES.33227.3	chr8	+	2936	4	NIC	ENSMUSG00000066880.16	novel	769	4	NA	NA	34	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	4.49691252107735	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72662512	72688474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72662583_72666965_72667093_72682045_72682173_72685862
ES.33227.4	chr8	+	3348	5	NIC	ENSMUSG00000089857.10	novel	631	3	NA	NA	-34	18286	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.6487347015536	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTGTGAAGAGACACC	NA	False	NA	40	True	AATAAA	-28	NA	72662714	72688484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72663126_72666965_72667093_72682045_72682173_72682981_72683043_72685862
ES.33227.5	chr8	+	2970	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	-39	-11	-39	11	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTGTGAAGAGACACC	NA	False	NA	40	True	AATAAA	-28	NA	72676656	72688484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ES.33227.6	chr8	+	1836	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	-14	1098	-14	1036	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTGATTCTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	72676681	72687375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ES.33227.7	chr8	+	2853	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTATTGCTGTG	NA	False	NA	30	True	AATAAA	-18	NA	72676702	72688474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72676817_72682045_72682173_72685862
ES.33227.8	chr8	+	2537	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	21	362	21	-362	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTTATTCTTAATA	NA	False	NA	NA	False	GATAAA	-18	NA	72676716	72688111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ES.33227.9	chr8	+	2954	5	NNC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.3885606997008	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676739	72688473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72676817_72676950_72677029_72682045_72682173_72682981_72683043_72685862
ES.33228.1	chr8	-	178	1	Intergenic	novelGene_27057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	72684966	72684788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72684800_72685000
ES.33229.1	chr8	-	2110	1	Intergenic	novelGene_27058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTCTGACCTTTATG	NA	False	NA	NA	False	ATTAAA	-13	NA	72704724	72702614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72702600_72704700
ES.3323.1	chr10	-	3791	13	NNC	ENSMUSG00000043822.19	novel	1957	13	NA	NA	-64	-212	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	6.0184900284226	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGAGACAGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	80184310	80175155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178534_80178742_80178855_80179432_80179506_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ES.3323.10	chr10	-	180	1	Intergenic	novelGene_2577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80183032	80182852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80182900_80183000
ES.3323.2	chr10	-	4161	11	NNC	ENSMUSG00000043822.19	novel	3520	12	NA	NA	2	-219	intron_retention	FALSE	canonical	0	0	junction_9	6.18142378421024	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	80184244	80175162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80177495_80177576_80177776_80177892_80178057_80178140_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181585_80183390_80183460_80184189
ES.3323.3	chr10	-	3060	8	ISM	ENSMUSG00000043822.19	ENSMUST00000124789.8	3520	12	3332	28	158	0	3prime_fragment	FALSE	canonical	2	3	junction_2	6.20401450017385	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTGCACTGCAGAGT	NA	False	NA	NA	False	NA	NA	NA	80180914	80175654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178855_80179432_80179561_80180666_80180776_80180876
ES.3323.4	chr10	-	3337	12	NNC	ENSMUSG00000043822.19	novel	1957	13	NA	NA	-34	-112	intron_retention	FALSE	canonical	1	1	junction_4	5.78399044384977	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGCCCCAGGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	80184280	80175766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80177495_80177576_80177776_80177892_80178057_80178140_80178534_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ES.3323.5	chr10	-	2079	12	NIC	ENSMUSG00000043822.19	novel	1957	13	NA	NA	-27	-6	intron_retention	FALSE	canonical	1	1	junction_5	5.11358585833645	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAACAAATCCCTCGC	NA	False	NA	NA	False	NA	NA	NA	80184273	80176680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ES.3323.6	chr10	-	2344	12	NNC	ENSMUSG00000043822.19	novel	2464	13	NA	NA	-40	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.54292880561694	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTTCAAGATCCTGG	NA	False	NA	NA	False	NA	NA	NA	80184286	80176771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178534_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181346_80181538_80183390_80183690_80184189
ES.3323.7	chr10	-	2426	12	FSM	ENSMUSG00000043822.19	ENSMUST00000124789.8	3520	12	-59	1153	-59	-105	multi-exon	FALSE	canonical	2	3	junction_2	5.22865594347215	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTTAAGGAGCTTCAA	NA	False	NA	NA	False	NA	NA	NA	80184305	80176779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ES.3323.8	chr10	-	1861	12	NNC	ENSMUSG00000043822.19	novel	1957	13	NA	NA	767	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.31147453007628	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTTTAAGGAGCTTCA	NA	False	NA	NA	False	NA	NA	NA	80183479	80176780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181585_80183390
ES.3323.9	chr10	-	1047	8	FSM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	-59	1	-59	-1	multi-exon	FALSE	canonical	2	6	junction_5	4.16986271980755	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGCCTCCCCTCAGT	NA	False	NA	NA	False	AATAGA	-15	NA	80184305	80178573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ES.33230.1	chr8	+	2698	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	-42	-2055	-13	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704868	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719765_72721742
ES.33230.10	chr8	+	2366	4	NNC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.710787655999	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72705005_72719637_72719765_72719943_72720566_72722643
ES.33230.11	chr8	+	2776	4	FSM	ENSMUSG00000052446.18	ENSMUST00000145256.8	504	4	8	-2280	1	0	multi-exon	FALSE	canonical	3	61	junction_2	168.256418071413	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719835_72719943_72720005_72721742
ES.33230.12	chr8	+	3869	4	NNC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.477893093614	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGTTTGTAGAGACTC	NA	False	NA	14	True	AATAAA	-16	NA	72704921	72724175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72705005_72718472_72719765_72719943_72720005_72721742
ES.33230.13	chr8	+	4513	3	FSM	ENSMUSG00000052446.18	ENSMUST00000147033.2	422	3	-2	-4089	-1	0	multi-exon	FALSE	canonical	3	61	junction_2	200	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704922	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719835_72719943
ES.33230.15	chr8	+	4810	4	NNC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.477893093614	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704924	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72705005_72717530_72719765_72719943_72720005_72721742
ES.33230.16	chr8	+	4084	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	14	-1385	4	2	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGCATATTTTTGAACCT	NA	False	NA	NA	False	AATAAA	-28	NA	72704928	72725562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ES.33230.17	chr8	+	4994	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	20	-4413	-4	975	multi-exon	FALSE	canonical	3	96	junction_2	182.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAACTTTGTCTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	72704930	72726535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719765_72721742
ES.33230.18	chr8	+	2602	5	NNC	ENSMUSG00000052446.18	novel	781	5	NA	NA	26	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	174.168560595763	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCCAGTTTGTAGA	NA	False	NA	9	True	AATAAA	-11	NA	72704960	72724170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742_72722725_72722782
ES.33230.19	chr8	+	429	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	53	2231	33	49	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGCCTTGGCTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	72704967	72721946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ES.33230.2	chr8	+	3265	4	FSM	ENSMUSG00000052446.18	ENSMUST00000145256.8	504	4	-28	-2733	4	453	multi-exon	FALSE	canonical	3	61	junction_2	168.256418071413	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACTCATTTATACACAA	NA	False	NA	NA	False	TATAAA	-21	NA	72704885	72724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719835_72719943_72720005_72721742
ES.33230.20	chr8	+	2727	4	NNC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.477893093614	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704973	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72705005_72719564_72719765_72719943_72720005_72721742
ES.33230.21	chr8	+	3059	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	-204	-2157	-204	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707086	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
ES.33230.22	chr8	+	2800	3	NIC	ENSMUSG00000052446.18	novel	698	4	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	28.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGTTTGTAGAGACTC	NA	False	NA	14	True	AATAAA	-16	NA	72707282	72724175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72707523_72719637_72719765_72721742
ES.33230.23	chr8	+	4776	2	ISM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	-4	-2157	-4	0	intron_retention	FALSE	canonical	3	39	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707286	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72707523_72719637
ES.33230.24	chr8	+	7762	2	ISM	ENSMUSG00000052446.18	ENSMUST00000139781.8	416	3	9757	-2164	7387	0	3prime_fragment	FALSE	canonical	3	347	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72714677	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72720005_72721742
ES.33230.25	chr8	+	6988	2	NNC	ENSMUSG00000052446.18	novel	2689	4	NA	NA	9840	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72717130	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72718589_72718647
ES.33230.26	chr8	+	6563	1	NIC	ENSMUSG00000052446.18	novel	2689	4	NA	NA	10322	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGTTTGTAGAGACTC	NA	False	NA	14	True	AATAAA	-16	NA	72717612	72724175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72717600_72724200
ES.33230.27	chr8	+	4463	2	ISM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	12238	-2150	12238	-7	intron_retention	FALSE	canonical	3	359	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCCAGTTTGTAGA	NA	False	NA	9	True	AATAAA	-11	NA	72719528	72724170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72719765_72719943
ES.33230.28	chr8	+	512	1	ISM	ENSMUSG00000052446.18	ENSMUST00000131237.8	2689	4	17170	1614	14761	201	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCACAACGAAGAAAAACTT	1470	False	NA	NA	False	NA	NA	NA	72722051	72722563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72722100_72722600
ES.33230.3	chr8	+	2735	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	-22	0	11	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704892	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ES.33230.4	chr8	+	2546	2	FSM	ENSMUSG00000052446.18	ENSMUST00000144807.2	701	2	-30	-1815	12	0	multi-exon	FALSE	canonical	3	13	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704893	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72721742
ES.33230.6	chr8	+	2585	3	FSM	ENSMUSG00000052446.18	ENSMUST00000139781.8	416	3	-5	-2164	1	0	multi-exon	FALSE	canonical	3	50	junction_1	148.5	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704915	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72705005_72719943_72720005_72721742
ES.33230.7	chr8	+	4449	3	ISM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	1	1	1	-1	intron_retention	FALSE	canonical	3	359	junction_2	51	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGTTTGTAGAGACTCT	NA	False	NA	15	True	AATAAA	-17	NA	72704915	72724176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72705005_72719637_72719765_72719943
ES.33230.8	chr8	+	4623	2	ISM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	7	0	1	0	intron_retention	FALSE	canonical	3	461	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704921	72724177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72705005_72719637
ES.33230.9	chr8	+	1624	1	NIC	ENSMUSG00000052446.18	novel	2689	4	NA	NA	1	-13543	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAGAGTCAGGAAGTG	NA	False	NA	NA	False	TTTAAA	-14	NA	72704921	72706545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72704900_72706500
ES.33231.1	chr8	-	7537	2	Antisense	novelGene_ENSMUSG00000052446.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5237	False	NA	NA	False	NA	NA	NA	72718684	72711088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72718595_72718653
ES.33232.1	chr8	+	214	1	ISM	ENSMUSG00000046881.8	ENSMUST00000210435.4	8718	2	8493	2401	6047	-2401	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTTTTAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	72869376	72869590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72869400_72869600
ES.33233.1	chr8	+	2084	8	ISM	ENSMUSG00000031799.11	ENSMUST00000123177.3	1803	9	4717	-366	-338	-6	3prime_fragment	FALSE	canonical	0	0	junction_1	264.24702419501	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72888734	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72888894_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.11	chr8	+	2127	8	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	261.807921490359	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889088	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900957_72901041_72901112_72905585
ES.33233.13	chr8	+	6349	8	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.135060522185	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889136	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72902374_72902584
ES.33233.15	chr8	+	2167	8	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	137	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	264.24702419501	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889238	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889481_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.16	chr8	+	5094	7	NNC	ENSMUSG00000031799.11	novel	2044	8	NA	NA	157	-6	intron_retention	FALSE	canonical	1	2	junction_3	283.435471786202	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889258	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72892566_72897293_72897412_72898521_72898593_72900299_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.17	chr8	+	2058	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	-20	6	-20	-6	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889631	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.18	chr8	+	1656	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	52	336	52	36	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGAACTGGATGTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	72889703	72906648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.19	chr8	+	2070	8	NNC	ENSMUSG00000031799.11	novel	1803	9	NA	NA	192	-6	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	253.461424831376	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72889843	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889989_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.2	chr8	+	2230	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	-72	0	-72	0	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATTTATTCTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	72889000	72906986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.21	chr8	+	2134	4	ISM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	10112	6	10112	-6	3prime_fragment	FALSE	canonical	3	724	junction_1	24.3447461820136	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGTCTGGATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	72899763	72906978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.5	chr8	+	1636	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	-3	525	-3	-151	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATTGAGCATTGTACT	NA	False	NA	NA	False	NA	NA	NA	72889069	72906461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.6	chr8	+	2092	7	NIC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	280.074791598403	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTGGATTTATTCT	NA	False	NA	NA	False	AATAAA	-14	NA	72889071	72906982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72901041_72901112_72905585
ES.33233.7	chr8	+	2167	8	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	263.899022123143	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATAATGTGTCTGGAT	NA	False	NA	NA	False	AATAAA	-7	NA	72889072	72906975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889298_72892411_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33233.8	chr8	+	1665	9	NNC	ENSMUSG00000031799.11	novel	2158	8	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	247.613988902081	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATGTGGAGTGCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	72889072	72906654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585_72906293_72906453
ES.33233.9	chr8	+	1810	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	10	338	10	36	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGAACTGGATGTGGAG	NA	False	NA	NA	False	AATAAA	-15	NA	72889082	72906648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ES.33234.1	chr8	-	4333	3	Antisense	novelGene_ENSMUSG00000031799.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCACCCAAGTTACTCC	NA	False	NA	NA	False	AATAAA	-16	NA	72889583	72884693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72885156_72885593_72885726_72885844
ES.33235.1	chr8	-	178	1	Intergenic	novelGene_27059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATTAACAACA	NA	False	NA	NA	False	NA	NA	NA	72893160	72892982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72893000_72893200
ES.33236.1	chr8	-	5295	3	NNC	ENSMUSG00000087502.2	novel	963	2	NA	NA	10998	3335	intron_retention	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACCCCAGACTATATAA	NA	False	NA	NA	False	NA	NA	NA	72903701	72898109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72898950_72899035_72902374_72902584
ES.33236.2	chr8	-	1085	2	Antisense	novelGene_ENSMUSG00000031799.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACCCCAGACTATATAA	NA	False	NA	NA	False	NA	NA	NA	72899283	72898109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72898922_72899010
ES.33237.1	chr8	-	172	1	Intergenic	novelGene_27060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTTAACATCTCA	NA	False	NA	NA	False	NA	NA	NA	72904736	72904564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72904600_72904700
ES.33238.1	chr8	-	3404	1	NIC	ENSMUSG00000087502.2	novel	963	2	NA	NA	14	-9837	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAAGATTTCATCTAT	NA	False	NA	NA	False	NA	NA	NA	72914685	72911281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_72911300_72914700
ES.33238.2	chr8	-	1806	1	Genic_Genomic	ENSMUSG00000087502.2	novel	NA	NA	NA	NA	-149	-11598	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	72914848	72913042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_72913000_72914800
ES.33239.1	chr8	+	2059	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	-48	2539	-48	-2539	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCCACCTGTGCA	NA	False	NA	14	True	ATTAAA	-14	NA	72914995	72935209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.10	chr8	+	1714	7	NNC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-18	-2623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	362.46720158136	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCCTCCCCTGGAGTC	NA	False	NA	25	True	ATTAAA	-22	NA	72915184	72935125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72915327_72925094_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.12	chr8	+	792	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	144	3614	-15	-3614	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGATGGAGAGAGTTAGAA	NA	False	NA	NA	False	NA	NA	NA	72915187	72934134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.14	chr8	+	1958	9	NNC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-15	-2623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	422.310145953185	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCCTCCCCTGGAGTC	NA	False	NA	25	True	ATTAAA	-22	NA	72915187	72935125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72915327_72922270_72922332_72924305_72924481_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.15	chr8	+	1392	8	NNC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-14	-3060	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	357.24409993557	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAATGAATCTGTCTTT	NA	False	NA	12	True	NA	NA	NA	72915188	72934688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930119_72930233_72931463_72931515_72933888
ES.33239.16	chr8	+	1605	9	NNC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-14	-2544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	337.136100113886	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTAGTTCCACCT	NA	False	NA	9	True	ATTAAA	-9	NA	72915188	72935204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888_72934334_72934589
ES.33239.17	chr8	+	1084	9	NNC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-8	-3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	337.136100113886	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAATCTGTCTTTG	NA	False	NA	13	True	NA	NA	NA	72915194	72934689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888_72934334_72934589
ES.33239.2	chr8	+	2281	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	123	2146	10	-2146	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCATGCTGAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	72915166	72935602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.3	chr8	+	4428	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	123	-1	10	1	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGCAGTAGCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	72915166	72937749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.4	chr8	+	3490	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	125	935	12	-935	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGAGCAGAGAGATGT	NA	False	NA	NA	False	NA	NA	NA	72915168	72936813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.5	chr8	+	1383	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	128	3039	15	-3039	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTAGCAGCATACCTG	NA	False	NA	33	True	AATGAA	-11	NA	72915171	72934709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.6	chr8	+	2555	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	140	1855	-19	-1855	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTTAAGATCCTTCCT	NA	False	NA	NA	False	TATAAA	-14	NA	72915183	72935893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.7	chr8	+	3802	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	140	608	-19	-608	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACTCTGCAAGAGCAAT	NA	False	NA	NA	False	NA	NA	NA	72915183	72937140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.8	chr8	+	1709	8	NIC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-18	-2630	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	352.544801032002	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCACCTGCCCTCCCC	NA	False	NA	18	True	ATTAAA	-15	NA	72915184	72935118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72915257_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ES.33239.9	chr8	+	3401	6	NIC	ENSMUSG00000003037.17	novel	4550	8	NA	NA	-18	-2632	intron_retention	FALSE	canonical	3	937	junction_5	70.650123849856	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGTCACCTGCCCTCC	NA	False	NA	16	True	ATTAAA	-13	NA	72915184	72935116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72931515_72933888
ES.3324.1	chr10	+	2140	14	NIC	ENSMUSG00000035486.15	novel	2100	15	NA	NA	30	-7	intron_retention	FALSE	canonical	1	5	junction_11	2.33825910054933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTGTCTGCTTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	80192322	80201316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80200168_80200923
ES.3324.2	chr10	+	2491	14	NIC	ENSMUSG00000035486.15	novel	2112	15	NA	NA	30	-7	intron_retention	FALSE	canonical	1	5	junction_10	2.22412804535399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTGTCTGCTTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	80192322	80201316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80192502_80193817_80193926_80194075_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
ES.3324.3	chr10	+	2027	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	66	7	66	-7	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGTGTCTGCTTCCTT	NA	False	NA	7	True	AATAAA	-13	NA	80192358	80201316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
ES.33240.1	chr8	-	5171	6	Antisense	novelGene_ENSMUSG00000003037.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAATTCATAGCCCAGG	NA	False	NA	NA	False	NA	NA	NA	72936744	72923116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_72925148_72928370_72928446_72929681_72929772_72930164_72930231_72931461_72931514_72933887
ES.33241.1	chr8	-	831	1	Intergenic	novelGene_27061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-31	NA	72938662	72937831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72937800_72938700
ES.33242.1	chr8	+	1873	6	NNC	ENSMUSG00000062007.14	novel	1824	6	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3.38230690505755	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGCATCATTTGCG	NA	False	NA	NA	False	NA	NA	NA	72943500	72955371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72943532_72947282_72947498_72950639_72950730_72951582_72951749_72952211_72952332_72954120
ES.33242.2	chr8	+	2054	6	NNC	ENSMUSG00000062007.14	novel	1824	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.31740662898458	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGCATCATTTGCG	NA	False	NA	NA	False	NA	NA	NA	72943502	72955371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72943783_72947282_72947430_72950639_72950730_72951582_72951749_72952211_72952332_72954120
ES.33242.3	chr8	+	1717	5	NNC	ENSMUSG00000062007.14	novel	1824	6	NA	NA	1782	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.63680924774785	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTGCATCATTTGCG	NA	False	NA	NA	False	NA	NA	NA	72949068	72955371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72949159_72950639_72950730_72951582_72951749_72952211_72952332_72954120
ES.33243.2	chr8	-	1852	3	NNC	ENSMUSG00000074240.6	novel	2014	4	NA	NA	5381	-6	intron_retention	FALSE	canonical	0	0	junction_2	7	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTCAGGATCTCTGCC	NA	False	NA	NA	False	AATAAA	-12	NA	72961282	72958184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_72958275_72959406_72961119_72961232
ES.33244.1	chr8	+	1206	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	-28	1386	-28	-398	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGTCTGTCCTGGCTG	NA	False	NA	24	True	AATAAA	-24	NA	72973545	72976876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.10	chr8	+	1230	3	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	-7	-399	intron_retention	FALSE	canonical	3	920	junction_2	39	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGTCTGTCCTGGCT	NA	False	NA	23	True	AATAAA	-23	NA	72973600	72976875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72973927_72975771_72975826_72976025
ES.33244.11	chr8	+	2985	3	FSM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	-7	409	-7	-409	multi-exon	FALSE	canonical	3	920	junction_2	33.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTGTGAATGTTGTC	NA	False	NA	13	True	AATAAA	-13	NA	72973600	72976865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72975826_72976025
ES.33244.12	chr8	+	468	2	ISM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	-7	3126	-7	-3126	5prime_fragment	FALSE	canonical	3	987	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	72973600	72974148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72973705_72973784
ES.33244.13	chr8	+	1229	4	NNC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	-6	-408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	467.890538006012	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGTGAATGTTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	72973601	72976866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72973705_72973784_72973927_72975771_72975915_72976025
ES.33244.14	chr8	+	1829	2	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	-6	1	intron_retention	FALSE	canonical	3	998	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTTGTGCGTGAAACA	NA	False	NA	19	True	AATATA	-15	NA	72973601	72977275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72973927_72975771
ES.33244.15	chr8	+	1560	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	29	975	-5	13	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACAGATATATGAGAT	NA	False	NA	31	True	AATATA	-27	NA	72973602	72977287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.16	chr8	+	2165	2	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	7	350	intron_retention	FALSE	canonical	3	998	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGGGTGTGGTGGCAC	NA	False	NA	NA	False	AATAAA	-22	NA	72973614	72977624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72973927_72975771
ES.33244.17	chr8	+	2512	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	41	11	7	-11	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATACTGCTGC	NA	False	NA	NA	False	NA	NA	NA	72973614	72978251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.18	chr8	+	1634	4	NNC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	10	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	467.890538006012	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAACAGATATATGAGAT	NA	False	NA	31	True	AATATA	-27	NA	72973617	72977287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72973705_72973784_72973927_72975771_72975915_72976025
ES.33244.19	chr8	+	1545	3	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	75	-2	intron_retention	FALSE	canonical	3	920	junction_2	39	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACTTTGTGCGTGAA	NA	False	NA	16	True	AATATA	-12	NA	72973682	72977272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72973927_72975771_72975826_72976025
ES.33244.2	chr8	+	555	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	-8	2017	-8	-1029	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTTGGGGTAGTTC	NA	False	NA	16	True	ATTAAA	-23	NA	72973565	72976245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.3	chr8	+	1718	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	-7	853	-7	135	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCTGGAGTGCTAGAA	NA	False	NA	NA	False	NA	NA	NA	72973566	72977409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.4	chr8	+	3463	3	FSM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	-41	-35	-7	35	multi-exon	FALSE	canonical	3	920	junction_2	33.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTGGGGTTTTTTGT	NA	False	NA	53	True	NA	NA	NA	72973566	72977309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72975826_72976025
ES.33244.5	chr8	+	1905	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	5	654	5	334	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAGTAAGGAGGAG	NA	False	NA	NA	False	AATAAA	-6	NA	72973578	72977608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ES.33244.7	chr8	+	1351	3	ISM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	17	1396	17	-408	intron_retention	FALSE	canonical	3	987	junction_1	5.5	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGTGAATGTTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	72973590	72976866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72973705_72973784_72973927_72975771
ES.33244.8	chr8	+	3689	1	NIC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	17	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGCGTGAAACAGATA	NA	False	NA	23	True	AATATA	-19	NA	72973590	72977279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72973600_72977300
ES.33244.9	chr8	+	3195	2	ISM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	-16	408	-16	-408	intron_retention	FALSE	canonical	3	987	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGTGAATGTTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	72973591	72976866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72973705_72973784
ES.33245.1	chr8	+	2094	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	-10	0	-10	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993851	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.10	chr8	+	3195	10	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	0	-7	intron_retention	FALSE	canonical	3	513	junction_7	41.2556019391067	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTGCCTGTCTTCTC	NA	False	NA	12	True	ATTAAA	-13	NA	72993939	73011222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.11	chr8	+	2126	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.878672341393	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	72993939	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005840_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.12	chr8	+	2842	10	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	78	0	0	0	intron_retention	FALSE	canonical	3	513	junction_9	42.4944440812888	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993939	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540
ES.33245.15	chr8	+	2230	11	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	513	junction_8	41.4450238267515	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	72993940	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.16	chr8	+	2964	11	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	513	junction_8	40.4040839519967	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	72993940	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.17	chr8	+	2427	10	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	2	-2	intron_retention	FALSE	canonical	3	513	junction_7	43.3720624650147	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTCTTCTCTCTGT	NA	False	NA	17	True	ATTAAA	-18	NA	72993941	73011227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.18	chr8	+	3450	10	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	272.197549902345	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993941	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_72995045_72995783_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73006678_73006822_73007052_73007125_73007318_73007478_73009540
ES.33245.19	chr8	+	2283	11	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	513	junction_9	41.0614174134308	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993946	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73010027_73010578
ES.33245.2	chr8	+	1986	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.843400100595	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	72993852	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_73001964_73002021_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.20	chr8	+	2006	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	4	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	223.273763693182	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACATCTGCTGCCTGTCT	NA	False	NA	8	True	ATTAAA	-9	NA	72993957	73011218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_72996745_72996932_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.21	chr8	+	3378	9	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	513	junction_6	43.1463715160383	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993957	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.22	chr8	+	2001	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	170.769527155634	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTGTCTTCTCTCTG	NA	False	NA	16	True	ATTAAA	-17	NA	72993962	73011226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006843_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.23	chr8	+	3117	10	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	29	-5	intron_retention	FALSE	canonical	3	513	junction_7	42.2122795310781	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGCCTGTCTTCTCTC	NA	False	NA	14	True	ATTAAA	-15	NA	72993982	73011224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73006822_73007052_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.24	chr8	+	1793	11	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	40	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	178.528457115385	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993993	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73009540_73009667_73009950_73010027_73010578
ES.33245.25	chr8	+	3298	3	NNC	ENSMUSG00000003033.16	novel	1066	4	NA	NA	-1111	-6	intron_retention	FALSE	canonical	0	0	junction_2	274.5	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	73005587	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73006822_73007052_73007478_73009584
ES.33245.3	chr8	+	1004	6	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	40	5329	12	239	5prime_fragment	FALSE	canonical	3	574	junction_2	24.8805144641344	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGGCCTTATTGTGATA	NA	False	NA	NA	False	NA	NA	NA	72993901	73005900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586
ES.33245.4	chr8	+	4268	7	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	513	junction_6	43.7708680390153	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993903	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73007478_73009540
ES.33245.6	chr8	+	2316	13	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	249.985610697007	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993916	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_72995045_72995340_72996781_72996932_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.7	chr8	+	2007	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.878672341393	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993934	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005718_73006686_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33245.8	chr8	+	2079	12	NNC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	169.426353487875	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	False	NA	13	True	ATTAAA	-14	NA	72993936	73011223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009874_73010027_73010578
ES.33245.9	chr8	+	1866	11	NIC	ENSMUSG00000003033.16	novel	2084	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	179.063005671188	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993936	73011229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ES.33246.1	chr8	-	177	1	Intergenic	novelGene_27062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATCTAGAAAAG	788	False	NA	NA	False	NA	NA	NA	72997558	72997381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_72997400_72997600
ES.33247.1	chr8	+	334	1	Intergenic	novelGene_27063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGCAGCTTTGGCT	NA	False	NA	NA	False	NA	NA	NA	73023374	73023708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73023400_73023700
ES.33248.1	chr8	+	225	1	Intergenic	novelGene_27064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAACGAACGAACGAACGAG	NA	False	NA	NA	False	NA	NA	NA	73031869	73032094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73031900_73032100
ES.33248.2	chr8	+	330	1	Intergenic	novelGene_27065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	73031871	73032201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73031900_73032200
ES.33249.1	chr8	+	177	1	Intergenic	novelGene_27066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	73052047	73052224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73052000_73052200
ES.3325.1	chr10	-	158	1	Intergenic	novelGene_2578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	80205036	80204878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80204900_80205000
ES.33250.1	chr8	-	3267	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-933	-1183	-933	1183	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CGTCAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73060037	73056770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73056800_73060000
ES.33250.2	chr8	-	466	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	-18	703	-18	-703	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTTTTTTTAAGCT	NA	False	NA	NA	False	TATAAA	-19	NA	73059122	73058656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73058700_73059100
ES.33251.1	chr8	-	132	1	Intergenic	novelGene_27067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	73070938	73070806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73070800_73070900
ES.33252.1	chr8	+	1710	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	-169	306	-169	-306	multi-exon	FALSE	canonical	3	2955	junction_2	16	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGTAGTGGTGTGGCT	NA	False	NA	33	True	ATTAAA	-20	NA	73072707	73075194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73072994_73073269_73074087_73074587
ES.33252.10	chr8	+	1427	4	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	29	-307	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1400.60375870154	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACGGTAGTGGTGTGGC	NA	False	NA	32	True	ATTAAA	-19	NA	73072905	73075193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73072994_73073269_73073492_73073575_73074087_73074587
ES.33252.11	chr8	+	4436	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	-2618	29	2618	multi-exon	FALSE	canonical	3	2955	junction_2	16	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTCTCTTGTGTTCTT	NA	False	NA	NA	False	AATAGA	-13	NA	73072905	73078118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73072994_73073269_73074087_73074587
ES.33252.13	chr8	+	1770	3	NNC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	114	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1473.5	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATCTTGGGGTTTAGCC	NA	False	NA	19	True	ATTAAA	-14	NA	73072990	73075498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73073033_73073269_73074087_73074587
ES.33252.14	chr8	+	1468	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	243	412	243	-412	3prime_fragment	FALSE	canonical	3	2955	junction_1	0	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTATGACCGATTGTAT	NA	False	NA	-73	True	NA	NA	NA	73073119	73075088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_73074087_73074587
ES.33252.2	chr8	+	2009	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	-144	-18	-144	18	multi-exon	FALSE	canonical	3	2955	junction_2	16	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTATGGAGCGTGCAGG	NA	False	NA	39	True	ATTAAA	-34	NA	73072732	73075518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73072994_73073269_73074087_73074587
ES.33252.3	chr8	+	2388	1	Genic_Genomic	ENSMUSG00000055148.8	novel	NA	NA	NA	NA	-71	-307	mono-exon	FALSE	NA	NA	NA	NA	NA	1110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACGGTAGTGGTGTGGC	NA	False	NA	32	True	ATTAAA	-19	NA	73072805	73075193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_73072800_73075200
ES.33252.4	chr8	+	2110	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	-69	307	-69	-307	intron_retention	FALSE	canonical	3	2987	junction_1	0	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACGGTAGTGGTGTGGC	NA	False	NA	32	True	ATTAAA	-19	NA	73072807	73075193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_73072994_73073269
ES.33252.5	chr8	+	2097	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	28	2	intron_retention	FALSE	canonical	3	2955	junction_1	0	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGGGTTTAGCCAAAC	NA	False	NA	23	True	ATTAAA	-18	NA	73072904	73075502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73074087_73074587
ES.33252.6	chr8	+	694	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	29	-307	combination_of_known_splicesites	FALSE	canonical	3	215	junction_1	0	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACGGTAGTGGTGTGGC	NA	False	NA	32	True	ATTAAA	-19	NA	73072905	73075193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73072994_73074587
ES.33252.7	chr8	+	1408	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	410	29	-410	multi-exon	FALSE	canonical	3	2955	junction_2	16	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATGACCGATTGTATTT	NA	False	NA	-71	True	NA	NA	NA	73072905	73075090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73072994_73073269_73074087_73074587
ES.33252.8	chr8	+	1787	2	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	29	-307	intron_retention	FALSE	canonical	3	2955	junction_1	0	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACGGTAGTGGTGTGGC	NA	False	NA	32	True	ATTAAA	-19	NA	73072905	73075193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73074087_73074587
ES.33252.9	chr8	+	4172	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	29	-2354	29	2354	multi-exon	FALSE	canonical	3	2955	junction_2	16	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTAACTTTAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	73072905	73077854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73072994_73073269_73074087_73074587
ES.33253.1	chr8	-	201	1	Intergenic	novelGene_27068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTTTTGTTTTTAAAG	NA	False	NA	NA	False	AATAGA	-7	NA	73090979	73090778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73090800_73091000
ES.33254.1	chr8	+	3361	1	Intergenic	novelGene_27069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTACTCAGTGGCCGGC	NA	False	NA	NA	False	NA	NA	NA	73101520	73104881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73101500_73104900
ES.33255.1	chr8	+	7513	3	Antisense	novelGene_ENSMUSG00000006276.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	73115478	73126629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73121833_73122557_73122617_73125529
ES.33256.1	chr8	+	2730	1	Antisense	novelGene_ENSMUSG00000006276.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73140074	73142804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73140100_73142800
ES.33257.1	chr8	+	169	1	Intergenic	novelGene_27071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACATAACAAA	NA	False	NA	NA	False	NA	NA	NA	73156603	73156772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73156600_73156800
ES.33258.1	chr8	-	2817	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-19	8	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCTTCTTTTTAATC	NA	False	NA	NA	False	TATAAA	-21	NA	73175323	73094834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.10	chr8	-	3172	25	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.362963803471	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175292	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73097352_73097497_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.11	chr8	-	3135	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	101.853224765272	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175308	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145854_73150073_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.12	chr8	-	2808	20	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	3	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	107.00446569499	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175292	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73175248
ES.33258.13	chr8	-	2774	22	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	94.0351890519999	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175307	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152872_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.14	chr8	-	2888	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	103.96947048846	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175282	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73154035_73154078_73175248
ES.33258.15	chr8	-	2836	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	97.0318172236252	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175306	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.16	chr8	-	2832	22	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	95.1691893586081	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175322	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.17	chr8	-	3831	17	NNC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	-5	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	88.0365691062527	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175309	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73094939_73130916_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.18	chr8	-	2563	21	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	98.9267405709902	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175301	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.2	chr8	-	3058	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-127	8	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCTTCTTTTTAATC	NA	False	NA	NA	False	TATAAA	-21	NA	73175431	73094834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.20	chr8	-	3164	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	101.864285710025	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175315	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.21	chr8	-	2916	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	113.098728171671	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175292	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134476_73134611_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.22	chr8	-	3163	24	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-123	4	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	97.7241014284603	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175427	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.23	chr8	-	2839	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	100.53546720083	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175294	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136601_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.24	chr8	-	7287	22	NNC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	-17	4	intron_retention	FALSE	canonical	2	5	junction_11	112.831481912885	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175321	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136601_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.25	chr8	-	3159	2	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	72866	-4	25720	4	3prime_fragment	FALSE	canonical	3	110	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73102438	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73095369_73099809
ES.33258.27	chr8	-	2619	21	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	97.8566681427485	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175295	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.28	chr8	-	3013	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	138.105573161891	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175301	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73156063_73156157_73175248
ES.33258.29	chr8	-	2697	22	NNC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.873788653648	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175316	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145854_73150083_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.3	chr8	-	3192	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-57	-6	-57	6	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATCTTCTTTTTAA	NA	False	NA	NA	False	TATAAA	-45	NA	73175361	73094836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.31	chr8	-	2695	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	-7	-2	2	0	multi-exon	FALSE	canonical	3	40	junction_6	89.8414577371977	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175302	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.32	chr8	-	4573	7	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-3070	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	109.243865833383	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73131228	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666
ES.33258.34	chr8	-	1887	13	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	128.086450840395	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175310	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135336_73136170_73136257_73136523_73136681_73175248
ES.33258.36	chr8	-	3406	8	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	45429	0	-1717	0	3prime_fragment	FALSE	canonical	3	88	junction_2	76.8149113925473	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73129875	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666
ES.33258.37	chr8	-	1722	15	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	112.838515641801	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175302	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134004_73145728_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.38	chr8	-	2338	7	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-855	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	86.7486791446033	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73129013	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666
ES.33258.39	chr8	-	3115	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.029024288267	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175285	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100011_73112150_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136166_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.4	chr8	-	8041	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	4	intron_retention	FALSE	canonical	3	33	junction_2	86.8433834130752	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175301	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.42	chr8	-	2888	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	111.798741843037	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175309	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73156063_73156157_73175248
ES.33258.43	chr8	-	2891	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	101.314174642402	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175292	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.44	chr8	-	3277	24	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	128.269903882267	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175294	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73136907_73137292_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.45	chr8	-	2878	23	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	112.715917683234	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175309	73094842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73137950_73138034_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.47	chr8	-	7852	21	NNC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	8	junction_4	96.3871879452866	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAACATGAGACTAT	NA	False	NA	NA	False	TATAAA	-34	NA	73175307	73094847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.48	chr8	-	4760	1	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	25505	1917	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTAAAACCAAACAAGCAA	NA	False	NA	NA	False	NA	NA	NA	73102653	73097893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73097900_73102700
ES.33258.49	chr8	-	4347	23	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	6	3217	1	1751	5prime_fragment	FALSE	canonical	3	88	junction_1	74.1921923450081	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCGGTGTGATGGTG	NA	False	NA	NA	False	NA	NA	NA	73175298	73098059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.5	chr8	-	3019	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-19	4	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175323	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.50	chr8	-	4014	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-11	1534	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	76.8432453358231	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCACTTTGAGTTGTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	73175315	73098276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.51	chr8	-	3866	23	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-11	3715	-11	1253	5prime_fragment	FALSE	canonical	3	88	junction_1	74.1921923450081	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTGTCCTGTAGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	73175315	73098557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.52	chr8	-	3749	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	3	1252	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	91.8935334373606	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAATTGTCCTGTAGCT	NA	False	NA	NA	False	AATAAA	-16	NA	73175292	73098558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.53	chr8	-	2817	23	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	-17	4770	-17	198	5prime_fragment	FALSE	canonical	3	88	junction_1	74.1921923450081	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGCAGGGAGAGTGGCG	NA	False	NA	NA	False	GATAAA	-21	NA	73175321	73099612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.54	chr8	-	4003	22	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-6	175	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	101.202901197961	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGAGCCATGGTTT	NA	False	NA	NA	False	AATAGA	-9	NA	73175310	73099635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73138034_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.55	chr8	-	2396	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-2	-70	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	76.8432453358231	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGCCCCTTCCTCT	NA	False	NA	NA	False	AATAAA	-32	NA	73175301	73099880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.56	chr8	-	3189	1	Intergenic	novelGene_27070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCATATGAAAACCGTC	NA	False	NA	NA	False	NA	NA	NA	73107062	73103873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73103900_73107100
ES.33258.57	chr8	-	5589	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-27	-2942	-5	2942	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATGTTTAAGGTGTCA	NA	False	NA	NA	False	NA	NA	NA	73175309	73108969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.58	chr8	-	5477	22	NIC	ENSMUSG00000006276.11	novel	2620	22	NA	NA	0	2937	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	81.5029178838572	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTTGATGTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	73175295	73108974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.59	chr8	-	5071	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-40	-2411	-18	2411	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTGCTCAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	73175322	73109500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.6	chr8	-	6336	7	NIC	ENSMUSG00000006276.11	novel	2686	22	NA	NA	-5935	4	intron_retention	FALSE	canonical	3	75	junction_1	85.0034313032911	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73134093	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73133000_73133952
ES.33258.60	chr8	-	3180	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-19	-541	-2	541	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCCTTAGGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	73175301	73111370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.61	chr8	-	2631	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	-27	16	-5	-16	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTGGTCCCTCAATG	NA	False	NA	NA	False	NA	NA	NA	73175309	73111927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.62	chr8	-	7712	20	NNC	ENSMUSG00000006276.11	novel	2620	22	NA	NA	1	-9359	intron_retention	FALSE	canonical	0	0	junction_11	85.1635545578668	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTGAAGCCTCCATGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	73175298	73121270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138702_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.64	chr8	-	3432	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	-55	-1	-50	1	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTGTTCAGTGTTCCA	NA	False	NA	NA	False	AATAAA	-14	NA	73175354	73131260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.65	chr8	-	3200	13	NIC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	96.5513680206897	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTGTTCAGTGTTCCA	NA	False	NA	NA	False	AATAAA	-14	NA	73175302	73131260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73175248
ES.33258.66	chr8	-	3350	15	NIC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	92.4470339255546	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175315	73131261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73175248
ES.33258.67	chr8	-	3320	16	NNC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	90.9149541543573	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175316	73131261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136608_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.68	chr8	-	3377	16	NNC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	-18	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	90.8550983098301	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTTGTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	73175322	73131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73133000_73133952_73134130_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.69	chr8	-	3291	16	NNC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	88.8322764164768	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTTGTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	73175293	73131262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136601_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.7	chr8	-	3267	25	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	114.993108187211	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175304	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73136907_73137042_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.71	chr8	-	3286	15	NIC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	90.139121498325	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGTCTTTGTTCAGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	73175302	73131264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73154035_73154078_73175248
ES.33258.72	chr8	-	872	9	ISM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	-7	9382	-2	-9382	5prime_fragment	FALSE	canonical	3	316	junction_1	27.8702350187436	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTTAAAACCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	73175306	73140643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ES.33258.8	chr8	-	2879	21	NNC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	120.749275360145	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	False	NA	NA	False	TATAAA	-43	NA	73175295	73094838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126849_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73175248
ES.33259.1	chr8	+	1510	3	Antisense	novelGene_ENSMUSG00000083922.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAATGGGTAAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	73175523	73193359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73175625_73188725_73189100_73192324
ES.33259.2	chr8	+	2115	3	Antisense	novelGene_ENSMUSG00000083922.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTCTGTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	73175538	73193979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73175625_73188725_73189100_73192324
ES.33259.3	chr8	+	1770	3	Antisense	novelGene_ENSMUSG00000083922.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	73175579	73193984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73175625_73190005_73190071_73192324
ES.33259.4	chr8	+	2342	2	Antisense	novelGene_ENSMUSG00000019732.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTTTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	73188416	73193983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73189100_73192324
ES.3326.1	chr10	-	3296	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	72	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCGTTCGCGTGGTG	NA	False	NA	0	True	AATAAA	-20	NA	80223523	80216188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80218456_80222494
ES.3326.2	chr10	-	3128	3	NIC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-40	-2	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	22	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTGGCGTTCGCGTGG	NA	False	NA	-2	True	AATAAA	-18	NA	80223533	80216190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80216897_80217072_80218456_80222494
ES.3326.3	chr10	-	3125	3	NNC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-20	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	36	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCTGGCGTTCGCGTG	NA	False	NA	-3	True	AATAAA	-17	NA	80223513	80216191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80218456_80222494_80223276_80223433
ES.3326.4	chr10	-	2773	4	NNC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.6348143611905	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCGCTGGCGTTCGCGT	NA	False	NA	-4	True	AATAAA	-16	NA	80223510	80216192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80216897_80217072_80218456_80222494_80223059_80223388
ES.3326.5	chr10	-	3117	3	NNC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAAGCGCTGGCGTTCG	NA	False	NA	-7	True	AATAAA	-13	NA	80223512	80216195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80216897_80217057_80218456_80222494
ES.3326.6	chr10	-	3181	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-25	110	-25	-11	multi-exon	FALSE	canonical	3	72	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTATATATTTGCT	NA	False	NA	-110	True	AATAAA	-31	NA	80223518	80216298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80218456_80222494
ES.3326.7	chr10	-	3019	3	NIC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-39	-11	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	22	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTATATATTTGCT	NA	False	NA	-110	True	AATAAA	-31	NA	80223532	80216298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80216897_80217072_80218456_80222494
ES.3326.8	chr10	-	2762	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	-20	524	-20	-425	multi-exon	FALSE	canonical	3	72	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACAGTGTGGATTCTT	NA	False	NA	NA	False	AAAACA	-33	NA	80223513	80216712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80218456_80222494
ES.3326.9	chr10	-	2571	3	NNC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	-11	-430	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGATTTAACAGTGTGGA	NA	False	NA	NA	False	AAAACA	-28	NA	80223504	80216717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80216897_80217073_80218456_80222494
ES.33260.1	chr8	-	178	1	Intergenic	novelGene_27072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	73176468	73176290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73176300_73176500
ES.33261.1	chr8	-	1655	9	FSM	ENSMUSG00000019732.15	ENSMUST00000019876.12	1769	9	119	-5	119	5	multi-exon	FALSE	canonical	3	18	junction_4	4.64858849544676	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTTTTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	73197595	73178014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73192275_73192480_73197238_73197341_73197436
ES.33261.2	chr8	-	131	1	Intergenic	novelGene_27073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73197084	73196953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73197000_73197100
ES.33262.1	chr8	+	2579	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	-57	365	-57	-5	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTAGAGGACTCTG	NA	False	NA	101	True	AAAACA	-27	NA	73197666	73214480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.10	chr8	+	3119	7	NIC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	16	-100	intron_retention	FALSE	canonical	3	61	junction_3	11.6285090283416	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197791	73214385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.11	chr8	+	156	1	Intergenic	novelGene_27075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	73202265	73202421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73202300_73202400
ES.33262.12	chr8	+	221	1	Intergenic	novelGene_27076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATATGGGTACTTTGC	NA	False	NA	NA	False	NA	NA	NA	73204635	73204856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73204600_73204900
ES.33262.13	chr8	+	4610	5	NNC	ENSMUSG00000052794.14	novel	228	2	NA	NA	-6422	-107	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.8782664018205	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCACATGTGTGTCTGC	NA	False	NA	-1	True	AGTAAA	-14	NA	73205311	73214378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73206841_73207099_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.2	chr8	+	2957	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	20	-102	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.1742462196942	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGTGTGTCTGCTTGTT	NA	False	NA	4	True	AGTAAA	-19	NA	73197743	73214383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73198120_73198330_73199315_73203290_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.3	chr8	+	2304	8	FSM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-32	101	20	-101	multi-exon	FALSE	canonical	0	0	junction_4	27.5251276665745	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTCTGCTTGTTT	NA	False	NA	5	True	AGTAAA	-20	NA	73197743	73214384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73209059_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.4	chr8	+	3768	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	20	-102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.8501163878243	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGTGTGTCTGCTTGTT	NA	False	NA	4	True	AGTAAA	-19	NA	73197743	73214383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73198120_73198330_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212792_73213236
ES.33262.5	chr8	+	1993	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	21	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5058435349914	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTCTGCTTGTTT	NA	False	NA	5	True	AGTAAA	-20	NA	73197744	73214384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73197834_73199005_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.6	chr8	+	6173	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	-24	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.5258690941404	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCTGCTTGTTTA	NA	False	NA	6	True	AGTAAA	-21	NA	73197751	73214385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73197834_73198593_73199907_73200111_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ES.33262.7	chr8	+	3616	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.4694635654107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAGGAGTCAGAAAATC	NA	False	NA	NA	False	ATTAAA	-15	NA	73197754	73214845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212764_73213262
ES.33262.9	chr8	+	3169	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	11	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.4694635654107	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCACATGTGTGTCTGC	NA	False	NA	-1	True	AGTAAA	-14	NA	73197786	73214378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212790_73213236
ES.33263.1	chr8	+	177	1	Intergenic	novelGene_27077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	73226202	73226379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73226200_73226400
ES.33264.1	chr8	+	1678	2	Intergenic	novelGene_27078	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATGGCAGTCTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	73229174	73231545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73229871_73230563
ES.33265.1	chr8	+	3943	1	Antisense	novelGene_ENSMUSG00000019731.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTGGCAGGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	73235479	73239422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_73235500_73239400
ES.33266.1	chr8	-	175	1	Intergenic	novelGene_27074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9392	False	NA	NA	False	NA	NA	NA	73198320	73198145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73198100_73198300
ES.33267.1	chr8	-	3667	17	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-29	13	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	136.073380364236	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGGATGAGAGATAC	NA	False	NA	1	True	AATAAA	-23	NA	73228709	73214319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215644_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455
ES.33267.10	chr8	-	5512	15	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4	6	intron_retention	FALSE	canonical	3	453	junction_4	59.3808616870274	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228975	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.101	chr8	-	3356	5	NIC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	-49	-938	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	107.383366961555	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGCTCACAGCAAGTAT	NA	False	NA	-11	True	AATAAA	-20	NA	73246507	73235422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73237838_73238504_73238751_73241964_73242091_73245685_73245757_73246009
ES.33267.102	chr8	-	3367	7	NNC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	4	-939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9375525747788	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAGGCTCACAGCAAGTA	NA	False	NA	-12	True	AATAAA	-19	NA	73246454	73235423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73236959_73237031_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.103	chr8	-	3368	5	NIC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	-51	-940	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	108.273669467697	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAGGCTCACAGCAAGT	NA	False	NA	-13	True	AATAAA	-18	NA	73246509	73235424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73237838_73238504_73238751_73243295_73243434_73245685_73245757_73246009
ES.33267.104	chr8	-	3404	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-61	1040	-61	-1040	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGTATTAATGCATT	NA	False	NA	-113	True	AATGAA	-34	NA	73246519	73235524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.105	chr8	-	3196	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-92	1279	-92	-1279	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTCTCCTGCTTGCCT	NA	False	NA	NA	False	NA	NA	NA	73246550	73235763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.106	chr8	-	1218	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	2	3163	2	770	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAACTCCTATGCTCTC	NA	False	NA	NA	False	AATACA	-13	NA	73246456	73237647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.11	chr8	-	3589	16	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-17	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	148.970541457774	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73229087	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215957_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.12	chr8	-	4173	9	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-69	6	intron_retention	FALSE	canonical	3	453	junction_3	48.9781520169963	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73222244	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218
ES.33267.13	chr8	-	3678	18	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	138.824900292334	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228982	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215920_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.15	chr8	-	4131	15	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	0	6	intron_retention	FALSE	canonical	3	8	junction_2	145.442393393118	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228979	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215466_73215592_73215644_73215823_73215947_73216020_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.16	chr8	-	5537	14	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	6	intron_retention	FALSE	canonical	3	453	junction_4	62.0283386275935	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228979	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.17	chr8	-	3691	18	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_12	135.818701669481	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73228978	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222125_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.19	chr8	-	4447	16	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-8	5	intron_retention	FALSE	canonical	0	0	junction_6	149.497320674616	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73228971	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921_73217161_73217557_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.2	chr8	-	3785	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-5	10	intron_retention	FALSE	canonical	3	416	junction_12	64.3418604020742	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCTGTGGATGAGAGA	NA	False	NA	-2	True	AATAAA	-20	NA	73228984	73214322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.20	chr8	-	3308	6	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	3971	5	intron_retention	FALSE	canonical	3	453	junction_4	69.5482566280421	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73218204	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921
ES.33267.21	chr8	-	3613	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	144.477060787344	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73228978	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.22	chr8	-	4116	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	2	5	intron_retention	FALSE	canonical	3	101	junction_12	125.592356455319	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73228977	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.23	chr8	-	3825	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-24	5	intron_retention	FALSE	canonical	3	416	junction_13	66.9152624126215	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73229029	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.25	chr8	-	3783	17	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	7	5	intron_retention	FALSE	canonical	2	4	junction_13	142.492968576523	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTAGCTGTGGATG	NA	False	NA	-7	True	AATAAA	-15	NA	73228972	73214327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222346_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.28	chr8	-	3800	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	7	4	intron_retention	FALSE	canonical	3	101	junction_12	120.993656212836	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228972	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.3	chr8	-	3813	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	-17	-150	-17	9	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGCTGTGGATGAGAG	NA	False	NA	-3	True	AATAAA	-19	NA	73229087	73214323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.31	chr8	-	3808	19	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	178.744774593397	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228990	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73220848_73220946_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.32	chr8	-	3558	17	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185.665599516308	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228973	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215467_73215592_73215688_73215823_73215947_73216240_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.33	chr8	-	2749	13	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	162.086825155189	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228991	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221698_73228552_73228630_73228901
ES.33267.36	chr8	-	3723	18	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_12	164.875353988827	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228978	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222125_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.39	chr8	-	4454	13	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-1	4	intron_retention	FALSE	canonical	3	416	junction_9	58.402994120355	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73229006	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.4	chr8	-	4093	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	6	8	intron_retention	TRUE	canonical	3	101	junction_11	124.958588695971	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCTGTGGATGAGA	NA	False	NA	-4	True	AATAAA	-18	NA	73228951	73214324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.40	chr8	-	3642	19	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	136.930425245906	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	False	NA	-8	True	AATAAA	-14	NA	73228990	73214328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215348_73215416_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.42	chr8	-	4467	15	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	46	3	intron_retention	FALSE	canonical	3	416	junction_11	62.5964154284396	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCCTCTAGCTGTGGA	NA	False	NA	-9	True	AATAAA	-13	NA	73228634	73214329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455
ES.33267.43	chr8	-	4976	6	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	2187	3	intron_retention	FALSE	canonical	3	453	junction_4	74.1252993248594	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCCTCTAGCTGTGGA	NA	False	NA	-9	True	AATAAA	-13	NA	73219988	73214329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644
ES.33267.44	chr8	-	3423	14	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4	0	intron_retention	TRUE	canonical	0	0	junction_4	208.649815629274	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228975	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.46	chr8	-	3713	18	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	138.437824101177	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228981	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222346_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.48	chr8	-	3716	18	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	167.412529451356	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228993	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215920_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.49	chr8	-	3441	8	ISM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	10237	0	3449	0	intron_retention	FALSE	canonical	3	453	junction_5	70.836690596709	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73218726	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921
ES.33267.5	chr8	-	4130	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	8	intron_retention	FALSE	canonical	3	101	junction_11	124.76723216543	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCTGTGGATGAGA	NA	False	NA	-4	True	AATAAA	-18	NA	73228979	73214324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.50	chr8	-	4058	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	416	junction_12	68.9393936729937	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228957	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.51	chr8	-	2498	7	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4078	0	intron_retention	FALSE	canonical	3	453	junction_5	78.3574430982079	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73218097	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73217161_73217927
ES.33267.52	chr8	-	3685	17	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	141.850700011491	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228977	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215659_73215877_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.53	chr8	-	3567	4	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	3971	0	intron_retention	FALSE	canonical	0	0	junction_3	261.689807893918	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73218204	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215688_73215823_73215947_73216020_73216153_73216247
ES.33267.54	chr8	-	3849	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	416	junction_12	66.9152624126215	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228975	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.55	chr8	-	3802	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	101	junction_13	121.604892993662	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.57	chr8	-	4038	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	101	junction_12	121.762063057424	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.58	chr8	-	3160	16	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	147.965671694485	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228995	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221649_73223819_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.59	chr8	-	3780	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	416	junction_12	65.7998860181384	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.6	chr8	-	3840	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-120	-7	-13	7	multi-exon	FALSE	canonical	3	101	junction_13	118.126552277382	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTAGCTGTGGATGAG	NA	False	NA	-5	True	AATAAA	-17	NA	73229083	73214325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.61	chr8	-	3741	17	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_7	144.866533402301	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228959	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216770_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.62	chr8	-	3856	18	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	168.863409923739	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228978	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221478_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.63	chr8	-	3800	17	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	137.787200058641	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229002	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215467_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.64	chr8	-	4009	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	416	junction_12	66.7595674323164	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228982	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.65	chr8	-	3906	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	416	junction_11	62.7512195543286	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228979	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.66	chr8	-	4014	17	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_3	170.393283593427	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228975	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215844_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.67	chr8	-	3642	18	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.554599028585	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228975	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215659_73215877_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.68	chr8	-	4269	15	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	101	junction_10	122.123745371952	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229002	73214332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.69	chr8	-	3688	18	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	180.068287700234	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATTTCCTCTAGCTG	NA	False	NA	-13	True	AATAAA	-9	NA	73228978	73214333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215460_73215588_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221610_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.7	chr8	-	3826	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-3	7	intron_retention	FALSE	canonical	3	416	junction_12	63.1118798246416	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTAGCTGTGGATGAG	NA	False	NA	-5	True	AATAAA	-17	NA	73228966	73214325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.70	chr8	-	6536	22	Fusion	ENSMUSG00000052488.8_ENSMUSG00000019731.14	novel	3646	18	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_15	185.717631227498	1088	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATTTCCTCTAGCTG	NA	False	NA	-13	True	AATAAA	-9	NA	73246464	73214333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228972_73229473_73236838_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.71	chr8	-	3032	14	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	158.653766899747	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATTTCCTCTAGCTG	NA	False	NA	-13	True	AATAAA	-9	NA	73228978	73214333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73223961_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.72	chr8	-	3643	19	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	136.930425245906	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGATTTCCTCTAGCT	NA	False	NA	-14	True	AATAAA	-8	NA	73228975	73214334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218257_73218303_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.73	chr8	-	7288	25	Fusion	ENSMUSG00000052488.8_ENSMUSG00000019731.14	novel	3646	18	NA	NA	-19	0	multi-exon	FALSE	canonical	0	0	junction_18	180.000617282892	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGACACTTGATTTTT	NA	False	NA	-2	True	AATAAA	-31	NA	73246477	73214473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901_73229473_73230442_73231639_73236842_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.74	chr8	-	3624	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-5	-10	intron_retention	FALSE	canonical	3	416	junction_13	66.9152624126215	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGTATCATATAAGACA	NA	False	NA	-12	True	AATAAA	-21	NA	73228984	73214483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.75	chr8	-	4786	15	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	3	-12	intron_retention	FALSE	canonical	3	416	junction_10	70.1109907247656	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73229002	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.76	chr8	-	3672	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	-112	153	-5	-12	multi-exon	FALSE	canonical	3	101	junction_13	118.126552277382	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73229075	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.77	chr8	-	3514	18	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	138.824900292334	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73228977	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215920_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.78	chr8	-	3653	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	-3	-12	intron_retention	FALSE	canonical	3	101	junction_13	121.604892993662	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73228982	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.8	chr8	-	3849	16	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	6	intron_retention	FALSE	canonical	3	416	junction_12	66.4514526218619	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228978	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.80	chr8	-	3805	15	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	95	-12	intron_retention	FALSE	canonical	3	416	junction_12	66.053781427079	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73228585	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455
ES.33267.81	chr8	-	3311	16	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	148.970541457774	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAGTATCATATAAGA	NA	False	NA	-14	True	AATAAA	-19	NA	73228978	73214485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.82	chr8	-	3596	17	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	3	-14	intron_retention	FALSE	canonical	3	416	junction_12	64.3418604020742	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTCAGTATCATATAA	NA	False	NA	-16	True	AATAAA	-17	NA	73228960	73214487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.84	chr8	-	4867	12	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	1	-14	intron_retention	FALSE	canonical	3	416	junction_7	58.5976616462912	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTCAGTATCATATAA	NA	False	NA	-16	True	AATAAA	-17	NA	73228978	73214487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73216165_73216247_73216335_73216644_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.85	chr8	-	3520	18	NNC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-7	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	140.388906195251	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTCAGTATCATATAA	NA	False	NA	-16	True	AATAAA	-17	NA	73228970	73214487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216153_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.87	chr8	-	2448	11	NNC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	430	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	165.877062911061	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTTTTCAGTATCATAT	NA	False	NA	-18	True	AATAAA	-15	NA	73221745	73214489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215844_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606
ES.33267.9	chr8	-	4098	16	NIC	ENSMUSG00000052488.8	novel	3646	18	NA	NA	-12	6	intron_retention	FALSE	canonical	3	416	junction_11	66.16833751039	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTAGCTGTGGATGA	NA	False	NA	-6	True	AATAAA	-16	NA	73228991	73214326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ES.33267.90	chr8	-	7230	7	NNC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	-14	2645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	118.073423484429	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTCTCCTATTGCTT	NA	False	NA	NA	False	NA	NA	NA	73246472	73231839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73244431_73244620_73245685_73245757_73246009
ES.33267.91	chr8	-	7046	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-20	-2643	-20	2643	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGGCTCTCCTATTGC	NA	False	NA	NA	False	NA	NA	NA	73246478	73231841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.92	chr8	-	4482	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-92	-7	-92	7	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCTGGTTTGTCAG	NA	False	NA	1	True	AATAAA	-22	NA	73246550	73234477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.94	chr8	-	4266	5	NIC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	107.383366961555	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGTTTGGTTCTGGT	NA	False	NA	-6	True	AATAAA	-15	NA	73246479	73234484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73237838_73238504_73238751_73241964_73242091_73245685_73245757_73246009
ES.33267.97	chr8	-	3536	6	NNC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	-1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	103.284848840476	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGGTTGGAGTTTGGTT	NA	False	NA	-11	True	AATAAA	-10	NA	73246459	73234489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73237130_73238639_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33267.98	chr8	-	3658	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	-194	919	-194	-919	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACTGGAATGGATGAG	NA	False	NA	8	True	AATAAA	-39	NA	73246652	73235403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ES.33268.1	chr8	+	2093	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	-9	910	-9	-910	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCTTTTACAGCCCAT	NA	False	NA	NA	False	AATAAA	-13	NA	73246768	73258433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73246895_73256466
ES.33268.2	chr8	+	3746	2	FSM	ENSMUSG00000097000.3	ENSMUST00000181452.2	2994	2	42	-794	32	794	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAACCAAGGGGTTAA	NA	False	NA	NA	False	AATAAA	-26	NA	73246819	73260137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73246895_73256466
ES.33269.1	chr8	+	170	1	Intergenic	novelGene_27079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	73280005	73280175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73280000_73280200
ES.3327.1	chr10	+	4850	1	Antisense	novelGene_ENSMUSG00000035478.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGAGTTGGCTAAG	950	False	NA	NA	False	NA	NA	NA	80229287	80234137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80229300_80234100
ES.33270.1	chr8	+	1364	1	Intergenic	novelGene_27080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGCTCTTAGTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	73302247	73303611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73302200_73303600
ES.33270.2	chr8	+	1970	2	Intergenic	novelGene_27081	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTCTTTGTGTAGTTCT	NA	False	NA	NA	False	NA	NA	NA	73302352	73304922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73303176_73303775
ES.33270.3	chr8	+	2502	1	Intergenic	novelGene_27082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGGGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73302409	73304911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73302400_73304900
ES.33270.4	chr8	+	3261	1	Intergenic	novelGene_27083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	73302476	73305737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73302500_73305700
ES.33271.1	chr8	-	3138	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	-136	-5	-136	5	multi-exon	FALSE	canonical	3	122	junction_2	2.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGGAATCATTTCTCA	3481	False	NA	0	True	AATAAA	-20	NA	73302250	73248399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73250951_73251366_73251442_73301738
ES.33271.2	chr8	-	3116	4	NNC	ENSMUSG00000045248.7	novel	2997	3	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.6340693079235	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTGGAATCATTTCT	3640	False	NA	-2	True	AATAAA	-18	NA	73302091	73248401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73250951_73251366_73251442_73299919_73300059_73301738
ES.33271.4	chr8	-	2629	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	-35	403	-35	-403	multi-exon	FALSE	canonical	3	122	junction_2	2.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATGCTGCAGAAAC	3582	False	NA	NA	False	NA	NA	NA	73302149	73248807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73250951_73251366_73251442_73301738
ES.33271.5	chr8	-	3431	2	Antisense	novelGene_ENSMUSG00000110532.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	73293260	73276154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_73279340_73293014
ES.33272.1	chr8	+	178	1	Intergenic	novelGene_27084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAAGGAGGTCAGG	NA	False	NA	NA	False	NA	NA	NA	73315392	73315570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73315400_73315600
ES.33273.1	chr8	+	174	1	Intergenic	novelGene_27085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACTTAGAGTAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	73318234	73318408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73318200_73318400
ES.33274.1	chr8	+	2377	2	NNC	ENSMUSG00000031791.9	novel	882	5	NA	NA	-1232	-12899	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGCGTTCTATTTT	NA	False	NA	NA	False	NA	NA	NA	73324666	73327120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73324779_73324855
ES.33274.2	chr8	+	2072	6	NNC	ENSMUSG00000031791.9	novel	882	5	NA	NA	-1228	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2931681236466	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAAGCTCTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	73324670	73341121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73324779_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ES.33274.3	chr8	+	3023	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-899	0	-881	0	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTTTTCTTTATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	73325017	73341126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ES.33274.4	chr8	+	3584	1	Genic_Genomic	ENSMUSG00000031791.9	novel	NA	NA	NA	NA	-867	-11404	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTTGCTTATTTATTG	NA	False	NA	NA	False	NA	NA	NA	73325031	73328615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_73325000_73328600
ES.33274.5	chr8	+	7900	2	ISM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	-27	2	-9	-2	intron_retention	FALSE	canonical	3	63	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTCTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	73325889	73341124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_73326072_73333406
ES.33274.7	chr8	+	2000	5	NIC	ENSMUSG00000031791.9	novel	2124	6	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	23.8051990119806	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTCTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	73325920	73341124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73339705
ES.33274.8	chr8	+	1275	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	5	844	5	257	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGAGACTCAATTATCT	NA	False	NA	NA	False	ACTAAA	-14	NA	73325921	73340282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ES.33274.9	chr8	+	5032	1	NIC	ENSMUSG00000031791.9	novel	2124	6	NA	NA	9314	255	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGGAGACTCAATTAT	NA	False	NA	NA	False	ACTAAA	-12	NA	73335248	73340280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73335200_73340300
ES.33275.1	chr8	-	2876	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	14	2	-12	-2	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGTCTATCTACTCCT	NA	False	NA	-1	True	AATAAA	-25	NA	73324918	73319033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ES.33275.10	chr8	-	743	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	20	2129	-6	170	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTGTCCTTAATTGAT	NA	False	NA	NA	False	NA	NA	NA	73324912	73321160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ES.33275.11	chr8	-	576	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	17	2299	-9	0	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGGTGTCTTTGTCTGT	NA	False	NA	-6	True	NA	NA	NA	73324915	73321330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ES.33275.2	chr8	-	2201	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	9	682	9	-682	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTATTTATTTTT	NA	False	NA	13	True	NA	NA	NA	73324923	73319713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ES.33275.3	chr8	-	2792	5	NNC	ENSMUSG00000044600.15	novel	2892	5	NA	NA	2	-731	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	196.903529678876	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGTGTGAAAAATTG	NA	False	NA	-36	True	GATAAA	-18	NA	73324891	73319762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73321653_73322699_73322791_73323809_73324190_73324372_73324760_73324847
ES.33275.4	chr8	-	2179	6	NNC	ENSMUSG00000044600.15	novel	2892	5	NA	NA	-6	-732	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	212.508823346232	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTGTGTGAAAAATT	NA	False	NA	-37	True	GATAAA	-17	NA	73324899	73319763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73321653_73322699_73322791_73323587_73323640_73323809_73323863_73324717_73324760_73324847
ES.33275.5	chr8	-	1216	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	-77	1753	-77	546	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGCTTGTGATGT	NA	False	NA	-3	True	AATAAA	-20	NA	73325009	73320784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ES.33275.6	chr8	-	1044	4	NIC	ENSMUSG00000044600.15	novel	2892	5	NA	NA	2	545	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	201.803534822031	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTGTTGCTTGTGATG	NA	False	NA	-4	True	AATAAA	-19	NA	73324891	73320785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73321653_73322699_73322791_73324717_73324760_73324847
ES.33275.8	chr8	-	1266	6	NNC	ENSMUSG00000044600.15	novel	2892	5	NA	NA	3	541	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	206.358910638722	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTTATTGTTGCTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	73324890	73320789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73321653_73322699_73322791_73323587_73323640_73323809_73323985_73324717_73324760_73324847
ES.33275.9	chr8	-	1227	5	NNC	ENSMUSG00000044600.15	novel	2892	5	NA	NA	1	539	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	194.777276652078	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCCTTTATTGTTGCTT	NA	False	NA	-10	True	AATAAA	-13	NA	73324905	73320791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73321653_73322699_73322791_73323809_73323985_73324717_73324760_73324847
ES.33276.1	chr8	-	176	1	Intergenic	novelGene_27086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGCCCACCCCCCGG	NA	False	NA	NA	False	NA	NA	NA	73372056	73371880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73371900_73372100
ES.33277.1	chr8	+	172	1	Intergenic	novelGene_27087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAGAACAAA	1453	False	NA	NA	False	NA	NA	NA	73384848	73385020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73384800_73385000
ES.33278.1	chr8	+	5720	14	ISM	ENSMUSG00000048148.19	ENSMUST00000093427.11	7840	19	24338	-95	-10742	95	3prime_fragment	FALSE	canonical	0	0	junction_1	0.92946507489189	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAGTAGCTGCAAACTT	NA	False	NA	NA	False	AATATA	-30	NA	73397676	73441461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_73397736_73398814_73398975_73401034_73401153_73401731_73401891_73408551_73408750_73414694_73414818_73419547_73419757_73421895_73422169_73424411_73424503_73429446_73429602_73431462_73431740_73434014_73434566_73436058_73436165_73438220
ES.33278.2	chr8	+	179	1	Intergenic	novelGene_27088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGTGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	73410547	73410726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73410500_73410700
ES.33278.3	chr8	+	173	2	Intergenic	novelGene_27089	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73410548	73410913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73410669_73410860
ES.33278.4	chr8	+	174	1	Intergenic	novelGene_27090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	73410739	73410913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73410700_73410900
ES.33278.5	chr8	+	3174	1	NIC	ENSMUSG00000048148.19	novel	7840	19	NA	NA	26043	2935	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAGCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	73434461	73437635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73434500_73437600
ES.33279.1	chr8	+	1087	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	-49	-14	-49	14	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTCGACCTCAAGTC	NA	False	NA	38	True	AATAAA	-35	NA	73449863	73466548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ES.33279.10	chr8	+	4150	19	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	285.166082212532	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTCAGGGTCCTTCGT	NA	False	NA	25	True	ATTAAA	-16	NA	73449917	73484828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483719_73483802
ES.33279.11	chr8	+	2287	8	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	305.349782701607	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTAGTTATGTGCA	NA	False	NA	19	True	AATAAA	-16	NA	73449920	73466529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73453124_73454401_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ES.33279.12	chr8	+	1001	7	NNC	ENSMUSG00000031622.17	novel	1024	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	252.304709957358	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTAGTTATGTGCA	NA	False	NA	19	True	AATAAA	-16	NA	73449922	73466529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450771_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ES.33279.14	chr8	+	4093	19	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	284.604056780297	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCCTCAGGGTCCTTC	NA	False	NA	23	True	ATTAAA	-14	NA	73449928	73484826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476352_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.33279.15	chr8	+	6308	17	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	11	-7	intron_retention	FALSE	canonical	3	42	junction_10	291.522076511797	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAAGCCTCAGGGTC	NA	False	NA	19	True	ATTAAA	-10	NA	73449928	73484822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73468192_73468437_73468557_73471085_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.33279.16	chr8	+	1421	1	Intergenic	novelGene_27091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTACAGCTGTATCTTA	NA	False	NA	NA	False	NA	NA	NA	73464454	73465875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73464500_73465900
ES.33279.17	chr8	+	3604	13	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-1423	-2	intron_retention	FALSE	canonical	0	0	junction_11	17.2004118167754	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTCAGGGTCCTTCG	NA	False	NA	24	True	ATTAAA	-15	NA	73466055	73484827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480260_73483100_73483681_73483802
ES.33279.18	chr8	+	3335	12	ISM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	18370	-2	-104	2	3prime_fragment	FALSE	canonical	3	42	junction_5	10.2964328252857	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73468285	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.33279.2	chr8	+	4153	19	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-39	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	285.595587336662	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449873	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480260_73483100_73483196_73483475_73483681_73483802
ES.33279.3	chr8	+	4454	18	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_16	291.358730836407	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCAGGGTCCTTCGTC	NA	False	NA	26	True	ATTAAA	-17	NA	73449904	73484829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483052_73483681_73483802
ES.33279.4	chr8	+	4113	19	NNC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	241.693440407063	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449910	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_73450031_73450671_73450779_73452164_73452319_73457708_73457907_73459975_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.33279.5	chr8	+	4121	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	-4	-2	-1	2	multi-exon	FALSE	canonical	3	31	junction_6	282.896831519815	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449911	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.33279.6	chr8	+	4398	18	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	-1	2	intron_retention	FALSE	canonical	3	31	junction_6	288.422988108098	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449914	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483681_73483802
ES.33279.9	chr8	+	6100	18	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	0	2	intron_retention	FALSE	canonical	3	42	junction_11	286.840213286906	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGGGTCCTTCGTCAT	NA	False	NA	28	True	ATTAAA	-19	NA	73449917	73484831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ES.3328.1	chr10	+	2654	1	Antisense	novelGene_ENSMUSG00000035478.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	6511	False	NA	NA	False	NA	NA	NA	80234848	80237502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80234800_80237500
ES.33280.1	chr8	-	6224	1	Antisense	novelGene_ENSMUSG00000031622.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	73462473	73456249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_73456200_73462500
ES.33280.2	chr8	-	2401	2	Antisense	novelGene_ENSMUSG00000031622.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	73460717	73456249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_73457900_73459966
ES.33281.1	chr8	+	179	1	Intergenic	novelGene_27092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGACATAGCA	NA	False	NA	NA	False	NA	NA	NA	73503280	73503459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73503300_73503500
ES.33282.1	chr8	-	1643	1	Intergenic	novelGene_27093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	73520614	73518971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73519000_73520600
ES.33283.1	chr8	+	177	1	Intergenic	novelGene_27095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGGAAAATA	NA	False	NA	NA	False	NA	NA	NA	73678659	73678836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73678700_73678800
ES.33284.1	chr8	+	4014	1	Intergenic	novelGene_27097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTTGAAGCAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	73720990	73725004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73721000_73725000
ES.33284.2	chr8	+	2869	1	Intergenic	novelGene_27096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAACATGCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	73720990	73723859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73721000_73723900
ES.33285.1	chr8	+	200	1	Intergenic	novelGene_27099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATTTAAATTTCAAAT	NA	False	NA	NA	False	NA	NA	NA	73745540	73745740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73745500_73745700
ES.33286.1	chr8	+	5828	1	Intergenic	novelGene_27103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73870980	73876808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73871000_73876800
ES.33287.1	chr8	+	151	1	Intergenic	novelGene_27105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73932339	73932490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_73932300_73932500
ES.33288.1	chr8	-	4490	3	ISM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	528821	-2828	275178	2828	3prime_fragment	FALSE	canonical	3	35	junction_1	1.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCACTAATACATGCTG	NA	False	NA	NA	False	NA	NA	NA	73550363	73538398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73542650_73544703_73544900_73550320
ES.33288.10	chr8	-	4697	16	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.3917535302941	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTCTTCTCCCTCC	NA	False	NA	-10	True	AATAAA	-15	NA	74080142	73541228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825007_73825080_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ES.33288.11	chr8	-	4749	16	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.882012549321	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTCTTCTCCCTCC	NA	False	NA	-10	True	AATAAA	-15	NA	74080204	73541228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73858841_73858904_73940752_73940941_74079093
ES.33288.12	chr8	-	1686	6	NNC	ENSMUSG00000004383.19	novel	3486	2	NA	NA	50491	-66452	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0272390016722	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCGCCAACATACTTGA	NA	False	NA	NA	False	NA	NA	NA	73775050	73607678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73608575_73609835_73609962_73612318_73612432_73614851_73615169_73638683_73638789_73774921
ES.33288.13	chr8	-	2377	3	Intergenic	novelGene_27094	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAATAAAAAAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	73681194	73668270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73668297_73678798_73680245_73680289
ES.33288.14	chr8	-	1538	1	Intergenic	novelGene_27098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGATGGTTTTTGTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	73738926	73737388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73737400_73738900
ES.33288.15	chr8	-	1193	1	Intergenic	novelGene_27100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATACCAGAATAGCACAG	NA	False	NA	NA	False	NA	NA	NA	73762177	73760984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73761000_73762200
ES.33288.16	chr8	-	2020	1	Intergenic	novelGene_27101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	73763723	73761703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73761700_73763700
ES.33288.17	chr8	-	2799	1	Intergenic	novelGene_27102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAAAAAAAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	73854418	73851619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73851600_73854400
ES.33288.18	chr8	-	2786	1	Intergenic	novelGene_27104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73928679	73925893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_73925900_73928700
ES.33288.2	chr8	-	6167	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	-975	-1523	9	1523	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCAGCATGAGAAGCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	74080159	73539703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ES.33288.3	chr8	-	4654	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	-983	-2	1	2	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTCTCCCTCCCACC	NA	False	NA	-6	True	AATAAA	-19	NA	74080167	73541224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ES.33288.4	chr8	-	4664	16	FSM	ENSMUSG00000004383.19	ENSMUST00000212459.2	4746	16	83	-1	83	1	multi-exon	FALSE	canonical	0	0	junction_14	11.2834194974554	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTTCTCCCTCCCAC	NA	False	NA	-7	True	AATAAA	-18	NA	74080085	73541225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74066821_74066915_74079093
ES.33288.5	chr8	-	4653	15	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.7736809065074	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	74080144	73541226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73773092_73773241_73774921_73775094_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ES.33288.6	chr8	-	3875	3	ISM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	526608	0	272965	0	3prime_fragment	FALSE	canonical	3	35	junction_1	1.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	73552576	73541226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_73542650_73544703_73544900_73550320
ES.33288.7	chr8	-	4793	17	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.2840070667702	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTCTTCTCCCTCCC	NA	False	NA	-9	True	AATAAA	-16	NA	74080154	73541227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73858841_73858904_73940752_73940941_74066821_74066915_74079093
ES.33288.8	chr8	-	4072	15	NNC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	-346	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	10.0247143579847	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTCTTCTCCCTCCC	NA	False	NA	-9	True	AATAAA	-16	NA	74079530	73541227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_73542650_73544703_73544958_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ES.33288.9	chr8	-	4581	14	NIC	ENSMUSG00000004383.19	novel	4746	16	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	11.1938275468192	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCTCTTCTCCCTCC	NA	False	NA	-10	True	AATAAA	-15	NA	74080181	73541228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73858458_73858761_73940752_73940941_74079093
ES.33289.1	chr8	-	192	1	Intergenic	novelGene_27106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAGATCTTTGTCCA	NA	False	NA	NA	False	NA	NA	NA	74339251	74339059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_74339100_74339300
ES.3329.1	chr10	-	1557	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	8	1	8	-1	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGTCACTGTGT	NA	False	NA	-5	True	AATAAA	-21	NA	80235376	80228373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ES.3329.11	chr10	-	1677	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	15	-2	intron_retention	FALSE	canonical	3	94	junction_4	532.129082084413	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235241	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80234955
ES.3329.12	chr10	-	1559	7	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	461.476133968185	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235394	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230476_80230897_80231036_80231269_80231430_80235051
ES.3329.13	chr10	-	1331	8	NNC	ENSMUSG00000035478.15	novel	1222	7	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_1	508.227973914648	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235272	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228596_80228800_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
ES.3329.14	chr10	-	1331	4	NNC	ENSMUSG00000035478.15	novel	1118	4	NA	NA	-44	-2	intron_retention	FALSE	canonical	2	3	junction_1	603.832758303158	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80231204	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80229130_80229726_80229905_80230399_80230491_80230897
ES.3329.15	chr10	-	1484	7	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-19	-2	intron_retention	FALSE	canonical	2	59	junction_1	434.585882063475	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235275	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228596_80228800_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231430_80235051
ES.3329.18	chr10	-	2667	4	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	47	-3	intron_retention	FALSE	canonical	3	303	junction_3	437.561678192026	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235209	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.19	chr10	-	1728	5	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	17	-3	intron_retention	FALSE	canonical	3	918	junction_4	163.121120643527	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235239	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231430_80235051
ES.3329.2	chr10	-	1658	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235402	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ES.3329.20	chr10	-	1857	5	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	303	junction_4	423.099500708758	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235272	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231430_80234955
ES.3329.22	chr10	-	2293	5	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	54	-3	intron_retention	FALSE	canonical	3	303	junction_4	423.236635937864	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235330	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.24	chr10	-	1502	6	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	3	-3	intron_retention	FALSE	canonical	1	14	junction_5	504.556438864871	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235253	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231424_80235051
ES.3329.26	chr10	-	1520	6	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-16	-3	intron_retention	FALSE	canonical	1	18	junction_1	488.433577879326	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235272	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80229108_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ES.3329.27	chr10	-	2074	5	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	60	-3	intron_retention	FALSE	canonical	3	918	junction_4	141.895207811962	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235324	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80230491_80230897_80231036_80231269_80231430_80235051
ES.3329.28	chr10	-	1604	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	-85	-297	43	-3	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGACTTGTCACTGT	NA	False	NA	-7	True	AATAAA	-19	NA	80235341	80228375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
ES.3329.3	chr10	-	1660	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-52	-2	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235308	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.30	chr10	-	1438	8	NNC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	498.027947744596	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGACTTGTCACTG	NA	False	NA	-8	True	AATAAA	-18	NA	80235285	80228376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228680_80228800_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.31	chr10	-	1523	7	NNC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_2	515.700629133695	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGACTTGTCACTG	NA	False	NA	-8	True	AATAAA	-18	NA	80235256	80228376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229108_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.32	chr10	-	1561	7	NNC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	466.678124859332	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGACTTGTCACTG	NA	False	NA	-8	True	AATAAA	-18	NA	80235293	80228376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231424_80234955
ES.3329.33	chr10	-	1711	6	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-38	-4	intron_retention	FALSE	canonical	0	0	junction_1	495.181825191515	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGACTTGTCACTG	NA	False	NA	-8	True	AATAAA	-18	NA	80235294	80228376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228923_80229115_80229726_80229905_80230399_80230491_80230897_80231430_80235051
ES.3329.34	chr10	-	1580	7	NNC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	47	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	554.054449791113	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAACTCTGACTTGTCAC	NA	False	NA	-10	True	AATAAA	-16	NA	80235209	80228378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229130_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80234955
ES.3329.36	chr10	-	2049	5	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	67	-10	intron_retention	FALSE	canonical	3	918	junction_4	163.241194249491	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGAACTCTGACTTG	NA	False	NA	-14	True	AATAAA	-12	NA	80235189	80228382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ES.3329.37	chr10	-	1533	6	NNC	ENSMUSG00000035478.15	novel	1222	7	NA	NA	49	-10	intron_retention	FALSE	canonical	1	14	junction_5	599.046108409027	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGAACTCTGACTTG	NA	False	NA	-14	True	AATAAA	-12	NA	80235207	80228382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231424_80235051
ES.3329.4	chr10	-	1653	7	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-37	-2	combination_of_known_junctions	FALSE	canonical	3	94	junction_5	494.959482067865	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235293	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80234955
ES.3329.6	chr10	-	1641	6	NIC	ENSMUSG00000035478.15	novel	1222	7	NA	NA	-45	-2	intron_retention	FALSE	canonical	3	94	junction_4	459.384544798799	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235301	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
ES.3329.7	chr10	-	1621	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	39	2	39	-2	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235345	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ES.3329.8	chr10	-	1352	7	NNC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	466.678124859332	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235272	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231344_80235065
ES.3329.9	chr10	-	1470	7	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	454.547913377188	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	False	NA	-6	True	AATAAA	-20	NA	80235275	80228374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80228853_80228928_80229130_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ES.33290.1	chr8	-	175	1	Intergenic	novelGene_27107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75660460	75660285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_75660300_75660500
ES.33291.1	chr8	+	172	1	Intergenic	novelGene_27108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAATAGTATGTGGT	NA	False	NA	NA	False	NA	NA	NA	75701072	75701244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_75701100_75701200
ES.33292.1	chr8	+	3919	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTTAGCTGTCTT	NA	False	NA	31	True	ATTAAA	-22	NA	75720271	75758605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.10	chr8	+	4084	13	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	39.4598072586384	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATAGTCCAGTCTT	NA	False	NA	22	True	ATTAAA	-13	NA	75720305	75758596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75725462_75725567_75725908_75726013_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.12	chr8	+	3993	12	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.9611789603056	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAGTCCAGTCTTAGC	NA	False	NA	25	True	ATTAAA	-16	NA	75720305	75758599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75725440_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750637_75750796_75756115_75756239_75756616
ES.33292.13	chr8	+	4149	13	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.6964174146176	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTCTTAGCTGTCTT	NA	False	NA	31	True	ATTAAA	-22	NA	75720305	75758605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75742874_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.14	chr8	+	2693	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-1	1297	-1	-1232	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACCAAAGCTGTTGGT	NA	False	NA	NA	False	AATAAA	-8	NA	75720305	75757309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.15	chr8	+	2596	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	0	-1224	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGGTGCCACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	75720306	75757317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.16	chr8	+	2584	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	324	1283	1	-1224	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGGTGCCACCTG	NA	False	NA	NA	False	AATAAA	-16	NA	75720307	75757317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.17	chr8	+	5051	10	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	5	2	intron_retention	FALSE	canonical	3	57	junction_2	16.282991201531	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCCAGTCTTAGCTGT	NA	False	NA	28	True	ATTAAA	-19	NA	75720311	75758602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75750796_75756115
ES.33292.18	chr8	+	3852	12	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.2441506692382	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATTACAGTTGTATAAA	NA	False	NA	-37	True	AATAAA	-21	NA	75720311	75758537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750688_75750796_75756115_75756239_75756616
ES.33292.19	chr8	+	3591	10	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.8574620861717	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTCCAGTCTTAGCTGTC	NA	False	NA	29	True	ATTAAA	-20	NA	75720313	75758603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75726187_75726337_75726440_75726488_75727414_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.2	chr8	+	3800	10	NIC	ENSMUSG00000034518.15	novel	4191	11	NA	NA	-34	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	36.3790062916159	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCCAGTCTTAGCTGT	NA	False	NA	28	True	ATTAAA	-19	NA	75720272	75758602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.20	chr8	+	3513	13	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	33.3969185205262	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTAGCTGTCTTTTCCC	NA	False	NA	36	True	ATTAAA	-27	NA	75720316	75758610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616_75756751_75757220
ES.33292.21	chr8	+	8139	3	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-2	1162	intron_retention	FALSE	canonical	3	83	junction_2	10	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTATAAACTCAGAAATAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	75720316	75729098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75726520_75726626_75726742_75727277
ES.33292.24	chr8	+	2694	7	NNC	ENSMUSG00000034518.15	novel	529	2	NA	NA	-2608	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.9380877548802	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGTCTTAGCTGTCT	NA	False	NA	30	True	ATTAAA	-21	NA	75740241	75758604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75740402_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.25	chr8	+	176	1	Intergenic	novelGene_27110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	75747647	75747823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_75747600_75747800
ES.33292.26	chr8	+	1976	6	NNC	ENSMUSG00000034518.15	novel	2656	7	NA	NA	-1054	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	47.3691882978799	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTATAGTCCAGTCTT	NA	False	NA	22	True	ATTAAA	-13	NA	75748428	75758596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616_75756751_75757220
ES.33292.27	chr8	+	1791	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-69	545	-69	-7	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCTGGTCCTGCCTT	NA	False	NA	NA	False	NA	NA	NA	75760263	75796204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.28	chr8	+	2319	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	-57	5	-57	-5	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATCTGCTCTGGCGGA	NA	False	NA	7	True	AATAAA	-20	NA	75760275	75796744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.29	chr8	+	2119	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-24	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	88.9817006780358	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATGATCTGCTCTGGC	NA	False	NA	4	True	AATAAA	-17	NA	75760308	75796741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75760456_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.3	chr8	+	2405	6	ISM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-34	29476	-34	1194	5prime_fragment	FALSE	canonical	3	57	junction_2	17.0926884953772	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATAAATGTATTCCATGA	NA	False	NA	NA	False	AATAAA	-13	NA	75720272	75729130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277
ES.33292.32	chr8	+	2044	16	NNC	ENSMUSG00000042870.16	novel	1769	16	NA	NA	1	-31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	83.1110635769323	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGTAGAAAACCAC	NA	False	NA	-19	True	NA	NA	NA	75760333	75796718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877_75796083_75796273
ES.33292.33	chr8	+	2262	15	NNC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	84.6621135419365	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCATGATCTGCTCTG	NA	False	NA	2	True	AATAAA	-15	NA	75760338	75796739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75760456_75774609_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.34	chr8	+	2200	15	NNC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-1	-31	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	75.3965367580106	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGTAGAAAACCAC	NA	False	NA	-19	True	NA	NA	NA	75760350	75796718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778268_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.35	chr8	+	3714	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	0	-31	intron_retention	FALSE	canonical	3	248	junction_1	31.2155365518875	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGTAGAAAACCAC	NA	False	NA	-19	True	NA	NA	NA	75760358	75796718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75760456_75774620_75774706_75776817_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.36	chr8	+	1885	12	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	5	-31	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	93.3566873575759	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGTAGAAAACCAC	NA	False	NA	-19	True	NA	NA	NA	75760369	75796718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75760456_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.37	chr8	+	2183	15	NNC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.811292675432	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCATGATCTGCTCTG	NA	False	NA	2	True	AATAAA	-15	NA	75760377	75796739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75760456_75774609_75774706_75776817_75776897_75778135_75778286_75778590_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.38	chr8	+	2079	14	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	87.2645437260516	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGATCTGCTCTGGCGG	NA	False	NA	6	True	AATAAA	-19	NA	75760379	75796743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ES.33292.39	chr8	+	179	1	Intergenic	novelGene_27111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	75800089	75800268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_75800100_75800300
ES.33292.4	chr8	+	4006	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	-17	0	-17	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720289	75758606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.5	chr8	+	4028	6	NIC	ENSMUSG00000034518.15	novel	4191	11	NA	NA	-14	-5	intron_retention	FALSE	canonical	1	1	junction_1	47.3691882978799	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATTACAGTTGTATAA	NA	False	NA	-38	True	AATAAA	-20	NA	75720292	75758536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75746871_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.6	chr8	+	5923	9	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	38	junction_1	25.8795285892151	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720292	75758606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75750796_75756115_75756239_75756616
ES.33292.7	chr8	+	3874	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	315	2	-8	-2	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATAGTCCAGTCTTAG	NA	False	NA	24	True	ATTAAA	-15	NA	75720298	75758598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ES.33292.9	chr8	+	2613	12	NNC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	-2	46817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.3977113075775	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCACCACCGACCGGCT	NA	False	NA	NA	False	NA	NA	NA	75720304	75805423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616_75757313_75805403
ES.33293.1	chr8	-	184	1	Intergenic	novelGene_27109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTGCTCTACAAA	NA	False	NA	NA	False	NA	NA	NA	75741597	75741413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_75741400_75741600
ES.33294.1	chr8	+	1602	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	-33	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820215	75827217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ES.33294.3	chr8	+	3461	3	NIC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	113.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820249	75827217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75820401_75822483_75823970_75825393
ES.33294.4	chr8	+	1586	5	NNC	ENSMUSG00000005413.9	novel	1569	5	NA	NA	140	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	92.3102784092866	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820388	75827217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75820558_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ES.33294.5	chr8	+	1296	3	ISM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	3222	7	-1	-7	3prime_fragment	FALSE	canonical	3	227	junction_1	4	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTAGAAGTGCAT	NA	False	NA	3	True	AATAAA	-12	NA	75823470	75827210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_75823970_75825393_75825494_75826513
ES.33295.1	chr8	-	140	1	Intergenic	novelGene_27112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	75821402	75821262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_75821300_75821400
ES.33296.1	chr8	+	2806	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-142	-60	-135	60	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGGATCATTCATTGA	NA	False	NA	92	True	AATACA	-41	NA	75836061	75854381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.10	chr8	+	5822	13	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-29	1	intron_retention	FALSE	canonical	3	1402	junction_6	118.002442300526	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTAGTGCTGTGTGAA	NA	False	NA	28	True	AATAAA	-41	NA	75836167	75854317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.11	chr8	+	4226	16	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-27	61	intron_retention	FALSE	canonical	3	795	junction_1	241.436221161799	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGGATCATTCATTGAG	NA	False	NA	93	True	AATACA	-42	NA	75836169	75854382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.12	chr8	+	3384	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-34	-746	-27	0	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTGAAGTGTTTG	NA	False	NA	1	True	NA	NA	NA	75836169	75855067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.13	chr8	+	3413	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	-22	-10	-22	10	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGCTTCTTACTC	NA	False	NA	11	True	NA	NA	NA	75836174	75855077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.15	chr8	+	4138	16	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-20	4	intron_retention	FALSE	canonical	3	635	junction_1	277.213243230229	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836176	75854325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.16	chr8	+	4902	16	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-18	0	intron_retention	FALSE	canonical	3	795	junction_1	241.436221161799	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTGAAGTGTTTG	NA	False	NA	1	True	NA	NA	NA	75836178	75855067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.17	chr8	+	2422	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-25	207	-18	-202	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTCTGAGGACTCT	NA	False	NA	15	True	NA	NA	NA	75836178	75854114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.18	chr8	+	2621	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	469.34415677624	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836186	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836849_75836933_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.19	chr8	+	3358	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	469.34415677624	1277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTGAAGTGTTTGC	NA	False	NA	2	True	NA	NA	NA	75836186	75855068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836937_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.20	chr8	+	3075	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	-13	-458	-6	-288	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTGCTGAAAACACTGCA	NA	False	NA	NA	False	TATAAA	-8	NA	75836190	75854779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.22	chr8	+	2958	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-5	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	414.187891391093	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAAGTATTTGTTATGT	NA	False	NA	NA	False	TATAAA	-22	NA	75836191	75854736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836230_75836404_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.23	chr8	+	5709	15	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-5	3	intron_retention	FALSE	canonical	3	795	junction_1	244.430742246351	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836191	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.24	chr8	+	3446	16	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-1	3	intron_retention	FALSE	canonical	3	635	junction_1	276.508902810259	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836195	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75851572_75852864_75852993_75853850
ES.33296.25	chr8	+	3307	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	464.172579536696	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836196	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852266_75852864_75852993_75853850
ES.33296.26	chr8	+	2420	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	961	0	-210	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTGTTTGAGTGTCTG	NA	False	NA	7	True	NA	NA	NA	75836196	75854106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.28	chr8	+	2623	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_1	396.728255350876	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGTAGTGCTGTGTG	NA	False	NA	26	True	AATAAA	-39	NA	75836196	75854315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836333_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.3	chr8	+	2708	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	-52	725	-52	21	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGACTCTTTCAGCTTTC	NA	False	NA	53	True	AATACA	-2	NA	75836144	75854342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.30	chr8	+	10068	12	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	635	junction_1	308.807222756279	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836197	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.31	chr8	+	5693	15	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	3	19	intron_retention	FALSE	canonical	3	635	junction_1	282.711831361612	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGACTCTTTCAGCTT	NA	False	NA	51	True	NA	NA	NA	75836199	75854340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.32	chr8	+	2590	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	579.253907922726	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATAGTAGTGCTGTGT	NA	False	NA	25	True	AATAAA	-38	NA	75836200	75854314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849626_75849733_75850471_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.33	chr8	+	2647	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	446.267922434214	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75836203	75854321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850449_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.34	chr8	+	3037	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	7	337	0	-337	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATATTTAAGTATTTG	NA	False	NA	NA	False	TATAAA	-16	NA	75836203	75854730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.35	chr8	+	4542	16	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	1	-334	intron_retention	FALSE	canonical	3	795	junction_1	241.436221161799	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTAAGTATTTGTTA	NA	False	NA	NA	False	TATAAA	-19	NA	75836204	75854733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.36	chr8	+	2624	17	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	447.389576983807	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836206	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851576_75852872_75852993_75853850
ES.33296.37	chr8	+	2749	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	11	621	4	125	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCAGTGAGTGAGTGG	NA	False	NA	157	True	NA	NA	NA	75836207	75854446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.38	chr8	+	8003	12	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	6	18	intron_retention	FALSE	canonical	3	795	junction_1	270.122867666482	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTGACTCTTTCAGCT	NA	False	NA	50	True	NA	NA	NA	75836209	75854339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75840949_75842479_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75852993_75853850
ES.33296.4	chr8	+	4704	16	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-52	2	intron_retention	FALSE	canonical	3	635	junction_1	274.083799026664	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGAAGTGTTTGCT	NA	False	NA	3	True	NA	NA	NA	75836144	75855069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.40	chr8	+	2752	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-36	-63	12	58	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACTGGATCATTCATT	NA	False	NA	90	True	AATACA	-39	NA	75836215	75854379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.42	chr8	+	2713	16	NNC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	15	3	intron_retention	FALSE	canonical	3	12	junction_12	422.226079514544	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836218	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850449_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.43	chr8	+	4217	15	NNC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	15	4	intron_retention	FALSE	canonical	3	12	junction_11	435.453229757367	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836218	75854325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850449_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.44	chr8	+	6321	13	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	15	3	intron_retention	FALSE	canonical	3	1402	junction_6	122.117998491441	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836218	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75852993_75853850
ES.33296.45	chr8	+	5130	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	22	-1771	15	1771	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTGTGTATGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	75836218	75856838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.46	chr8	+	4198	15	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	15	4	intron_retention	FALSE	canonical	3	1402	junction_6	118.615503856376	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTGTGAATACAAGGT	NA	False	NA	36	True	NA	NA	NA	75836218	75854325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.47	chr8	+	2315	16	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	464.761367681188	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGTAGTGCTGTGTGA	NA	False	NA	27	True	AATAAA	-40	NA	75836218	75854316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836327_75836503_75836717_75836752_75839242_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.49	chr8	+	5645	14	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	15	3	intron_retention	FALSE	canonical	3	1402	junction_5	121.52390370457	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836218	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.5	chr8	+	2648	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	469.316553451666	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75836149	75854321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847849_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.50	chr8	+	3449	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-32	-764	16	13	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGCTTCTTACTCCCT	NA	False	NA	14	True	NA	NA	NA	75836219	75855080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.51	chr8	+	3097	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	-29	-415	19	-336	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATATTTAAGTATTTGT	NA	False	NA	NA	False	TATAAA	-17	NA	75836222	75854731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.54	chr8	+	2678	16	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	22	3	intron_retention	TRUE	canonical	0	0	junction_4	425.373164279188	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836225	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839336_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.55	chr8	+	4942	15	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	22	2	intron_retention	FALSE	canonical	3	795	junction_1	248.155409255686	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836225	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75851572_75852864_75852993_75853850
ES.33296.56	chr8	+	5421	15	NIC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	22	19	intron_retention	FALSE	canonical	3	795	junction_1	245.345778484995	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGACTCTTTCAGCTT	NA	False	NA	51	True	NA	NA	NA	75836225	75854340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.57	chr8	+	4267	14	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	22	2	intron_retention	FALSE	canonical	3	1402	junction_7	113.510002687249	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836225	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.58	chr8	+	6394	12	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	24	2	intron_retention	FALSE	canonical	3	1402	junction_5	121.406427594082	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836227	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75852993_75853850
ES.33296.6	chr8	+	2472	16	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-39	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	464.142430246962	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836157	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840912_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.60	chr8	+	4684	13	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-17	3	intron_retention	FALSE	canonical	3	1402	junction_5	122.144950320874	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836234	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.61	chr8	+	7166	12	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-12	1	intron_retention	FALSE	canonical	3	1402	junction_6	113.318099770236	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGCTGTGTGAATACAA	NA	False	NA	33	True	NA	NA	NA	75836239	75854322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.62	chr8	+	2442	15	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	437.073547259824	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836325	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.63	chr8	+	4913	14	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	0	intron_retention	FALSE	canonical	3	1402	junction_6	122.246573989094	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGTAGTGCTGTGTGA	NA	False	NA	27	True	AATAAA	-40	NA	75836325	75854316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75851572_75852864_75852993_75853850
ES.33296.64	chr8	+	2369	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	74	210	74	-210	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTGTTTGAGTGTCTG	NA	False	NA	7	True	NA	NA	NA	75836325	75854106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.65	chr8	+	4700	14	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	-3	intron_retention	FALSE	canonical	3	1402	junction_7	117.715080753005	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGATAGTAGTGCTGTG	NA	False	NA	24	True	AATAAA	-37	NA	75836325	75854313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75852993_75853850
ES.33296.66	chr8	+	8650	11	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	3	intron_retention	FALSE	canonical	3	1402	junction_4	126.703157024598	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836325	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.67	chr8	+	2584	16	NNC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.619872433945	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836325	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836497_75836713_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.7	chr8	+	3944	16	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-37	3	intron_retention	FALSE	canonical	3	635	junction_1	274.083799026664	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836159	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.70	chr8	+	2577	16	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	425.132742668556	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75836325	75854321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840799_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.71	chr8	+	2801	15	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	74	2	intron_retention	FALSE	canonical	3	1402	junction_6	118.683617321045	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836325	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.73	chr8	+	2285	14	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	673	-7	673	2	3prime_fragment	FALSE	canonical	3	1402	junction_5	116.548438262975	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836924	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.74	chr8	+	5195	10	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	3118	3	intron_retention	FALSE	canonical	3	1402	junction_2	130.307423776844	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75839369	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75840949_75842479_75844322_75845884_75845997_75847407_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.75	chr8	+	2771	12	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	4554	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_5	485.700805771694	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTGAAGTGTTTG	NA	False	NA	1	True	NA	NA	NA	75840805	75855067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847779_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.76	chr8	+	5730	7	NNC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-4440	2	intron_retention	FALSE	canonical	3	12	junction_4	612.283612570369	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75843087	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75844322_75845884_75847906_75848165_75848343_75849619_75849733_75850449_75850598_75851428_75852993_75853850
ES.33296.77	chr8	+	3947	8	NIC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-3971	0	intron_retention	FALSE	canonical	3	1402	junction_1	135.803128814908	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75843556	75854321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75844322_75845884_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.78	chr8	+	3369	7	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-3255	1	intron_retention	FALSE	canonical	3	1402	junction_1	131.864092492569	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTAGTGCTGTGTGAA	NA	False	NA	28	True	AATAAA	-41	NA	75844272	75854317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75844322_75845884_75845997_75847407_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.79	chr8	+	5711	7	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-3171	1	intron_retention	FALSE	canonical	3	1485	junction_2	109.881249032257	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGTAGTGCTGTGTGAA	NA	False	NA	28	True	AATAAA	-41	NA	75844356	75854317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75852993_75853850
ES.33296.8	chr8	+	2661	17	NNC	ENSMUSG00000005410.7	novel	2604	17	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	463.159053235225	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCTGTGTGAATACAAG	NA	False	NA	34	True	NA	NA	NA	75836167	75854323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850449_75850598_75851428_75851572_75852864_75852993_75853850
ES.33296.80	chr8	+	5159	6	NIC	ENSMUSG00000005410.7	novel	2653	16	NA	NA	-1037	1	intron_retention	FALSE	canonical	3	1485	junction_2	118.452690978297	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTGAAGTGTTTGC	NA	False	NA	2	True	NA	NA	NA	75846490	75855068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75852993_75853850
ES.33296.81	chr8	+	3611	5	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	11358	-8	82	3	intron_retention	FALSE	canonical	3	1485	junction_1	109.391498755616	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75847609	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428
ES.33296.83	chr8	+	186	1	Intergenic	novelGene_27113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACATATGTTCAGATTC	NA	False	NA	NA	False	NA	NA	NA	75850043	75850229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_75850000_75850200
ES.33296.9	chr8	+	4164	16	NNC	ENSMUSG00000005410.7	novel	3381	17	NA	NA	-29	3	intron_retention	FALSE	canonical	2	75	junction_1	408.509790444353	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTGTGTGAATACAAGG	NA	False	NA	35	True	NA	NA	NA	75836167	75854324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75836250_75836333_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ES.33297.1	chr8	-	177	1	Intergenic	novelGene_27114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTAATAAAGC	NA	False	NA	NA	False	NA	NA	NA	75883363	75883186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_75883200_75883400
ES.33298.2	chr8	+	3537	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-777	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.31816613336672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGATGCTTACTTCC	NA	False	NA	7	True	ATTAAA	-17	NA	75939794	75950737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75940707_75945163_75945444_75948346_75949349_75949394
ES.33298.3	chr8	+	3553	3	FSM	ENSMUSG00000034472.14	ENSMUST00000139848.8	2810	3	-745	2	-745	-2	multi-exon	FALSE	canonical	3	15	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATGCTTACTTCCTG	NA	False	NA	9	True	ATTAAA	-19	NA	75939826	75950739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_75940707_75945163_75945444_75948346
ES.33298.4	chr8	+	3481	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-732	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.31816613336672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATGCTTACTTCCTG	NA	False	NA	9	True	ATTAAA	-19	NA	75939839	75950739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75940707_75945163_75945444_75948346_75949362_75949420
ES.33298.7	chr8	+	2975	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-693	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7.31816613336672	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGATGCTTACTTCCT	NA	False	NA	8	True	ATTAAA	-18	NA	75939878	75950738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75940224_75945163_75945444_75948346_75949349_75949390
ES.33298.8	chr8	+	6631	4	NNC	ENSMUSG00000034472.14	novel	2810	3	NA	NA	-692	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.54247233265651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGATGCTTACTTCCT	NA	False	NA	8	True	ATTAAA	-18	NA	75939879	75950738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_75942263_75943528_75945444_75948346_75949362_75949420
ES.33299.1	chr8	-	375	1	FSM	ENSMUSG00000110469.2	ENSMUST00000212864.2	1250	1	877	-2	877	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	76132340	76131965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_76132000_76132300
ES.333.1	chr1	-	176	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	7321	False	NA	NA	False	NA	NA	NA	38053267	38053091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_38053100_38053300
ES.3330.1	chr10	-	4563	1	Genic_Genomic	ENSMUSG00000020163.13	novel	NA	NA	NA	NA	1	765	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATACGTCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	80242628	80238065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_80238100_80242600
ES.3330.2	chr10	-	2159	2	NIC	ENSMUSG00000020163.13	novel	445	3	NA	NA	-4	765	intron_retention	FALSE	canonical	3	4370	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATACGTCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	80242633	80238065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80240121_80242529
ES.3330.3	chr10	-	474	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	-12	-17	-12	17	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTTCCTCAAGGCTTT	NA	False	NA	16	True	ATTAAA	-38	NA	80242676	80238813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80238990_80239969_80240121_80242529
ES.3330.5	chr10	-	2819	2	ISM	ENSMUSG00000020163.13	ENSMUST00000141683.2	605	3	-1	0	-1	0	intron_retention	FALSE	canonical	3	4161	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGGCTCCTTCCTCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	80242630	80238831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80238990_80239969
ES.3330.6	chr10	-	435	3	NNC	ENSMUSG00000020163.13	novel	605	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	2077.5	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGGCTCCTTCCTCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	80242647	80238831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80238990_80239969_80240121_80242521
ES.3330.7	chr10	-	425	3	NNC	ENSMUSG00000020163.13	novel	445	3	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2185	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCCTGGCTCCTTCCTCA	NA	False	NA	-3	True	ATTAAA	-19	NA	80242654	80238832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80238982_80239969_80240121_80242529
ES.33300.1	chr8	-	1807	1	FSM	ENSMUSG00000101431.2	ENSMUST00000120430.2	1597	1	-59	-151	-59	151	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTGACAGCATATGCT	NA	False	NA	NA	False	AGTAAA	-27	NA	76439883	76438076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_76438100_76439900
ES.33301.1	chr8	+	6425	9	FSM	ENSMUSG00000031618.14	ENSMUST00000109913.9	5916	9	-510	1	-180	-1	multi-exon	FALSE	canonical	0	0	junction_2	2.11763429326218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTGTCCTGGAACTGG	NA	False	NA	NA	False	NA	NA	NA	77625889	77971640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_77626889_77634898_77636658_77812155_77812296_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ES.33301.2	chr8	+	5652	9	FSM	ENSMUSG00000031618.14	ENSMUST00000109912.8	5675	9	25	-2	25	2	multi-exon	FALSE	canonical	0	0	junction_1	2.17944947177034	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTTGTCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	77628940	77971638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_77629169_77634898_77636658_77812155_77812296_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ES.33301.3	chr8	+	5729	11	NNC	ENSMUSG00000031618.14	novel	5675	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.03960780543711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGTCCTGGAACTGGT	NA	False	NA	NA	False	NA	NA	NA	77628950	77971641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_77629169_77631088_77631142_77633221_77633253_77634898_77636658_77812155_77812296_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ES.33301.4	chr8	+	3827	8	NNC	ENSMUSG00000031618.14	novel	5916	9	NA	NA	11532	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.24971653543195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTTGTCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	77646432	77971638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_77646595_77812155_77812296_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ES.33301.5	chr8	+	3643	7	NNC	ENSMUSG00000031618.14	novel	5916	9	NA	NA	11571	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.74535599249993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTTGTCCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	77646471	77971638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_77646595_77812155_77812296_77881830_77881948_77912404_77912744_77937272_77937404_77944056_77944215_77969003
ES.33302.1	chr8	+	7313	1	Antisense	novelGene_ENSMUSG00000037148.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCAGATCCCGGTATGG	NA	False	NA	NA	False	NA	NA	NA	78140546	78147859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_78140500_78147900
ES.33303.1	chr8	-	3025	23	NNC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	49303	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	7.99173126394033	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGTCCGGCCTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	78195109	77976993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78194845
ES.33303.2	chr8	-	3114	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	-31	1	-31	-1	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGTGTCCGGCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	78244613	77976995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ES.33303.3	chr8	-	3428	24	NNC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	66	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	11.9815548220851	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTGTGTCCGGCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	78244516	77976995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091754_78091790_78109353_78109420_78110413_78110707_78111379_78111426_78114555_78114786_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78177321_78177384_78177456_78177553_78244258
ES.33303.4	chr8	-	2995	22	NIC	ENSMUSG00000037148.9	novel	3084	23	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	7.70575660186956	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGTCCGGCCTA	NA	False	NA	NA	False	AATAAA	-12	NA	78244570	77976996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ES.33303.5	chr8	-	2404	15	NIC	ENSMUSG00000037148.9	novel	2295	22	NA	NA	49	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	9.19516288100234	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGTCCGGCCTA	NA	False	NA	NA	False	AATAAA	-12	NA	78244533	77976996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78244258
ES.33303.6	chr8	-	2979	22	FSM	ENSMUSG00000037148.9	ENSMUST00000210922.2	2208	22	-220	-551	-50	-2	multi-exon	FALSE	canonical	0	0	junction_2	8.01868566087306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGTCCGGCCTA	NA	False	NA	NA	False	AATAAA	-12	NA	78244632	77976996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_77977637_77983954_77984047_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ES.33304.1	chr8	+	173	1	Intergenic	novelGene_27118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	78269097	78269270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78269100_78269300
ES.33305.1	chr8	-	1115	4	Intergenic	novelGene_27115	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATCATCTGAGTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	78269932	78258275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78258349_78258563_78259460_78266828_78266877_78269834
ES.33305.2	chr8	-	862	3	Intergenic	novelGene_27116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAATA	NA	False	NA	NA	False	NA	NA	NA	78269934	78258745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78259460_78266828_78266877_78269834
ES.33305.3	chr8	-	136	1	Intergenic	novelGene_27117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78267401	78267265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78267300_78267400
ES.33306.1	chr8	+	2798	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	-13	-4	-13	4	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGTAACATTATTTTT	NA	False	NA	17	True	AATAAA	-22	NA	78276012	78307971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.10	chr8	+	4236	15	NNC	ENSMUSG00000037134.18	novel	2688	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.9207145443498	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276097	78307966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78278602_78279838_78280295_78280362_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78297717_78297980_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.11	chr8	+	2989	2	ISM	ENSMUSG00000037134.18	ENSMUST00000210040.2	2688	12	28610	0	14402	0	3prime_fragment	FALSE	canonical	3	187	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78304692	78307966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_78307378_78307662
ES.33306.2	chr8	+	4629	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	5	-1853	-5	1853	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTTTTTTTAATTATT	NA	False	NA	NA	False	NA	NA	NA	78276030	78309820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.3	chr8	+	1640	9	NNC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	5	3671	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	46.3261197921864	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAACAACAGCAACA	NA	False	NA	NA	False	NA	NA	NA	78276043	78295393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78295216
ES.33306.4	chr8	+	5718	12	NNC	ENSMUSG00000037134.18	novel	2688	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.550641328472	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276044	78307966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78297980_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.5	chr8	+	2709	12	NNC	ENSMUSG00000037134.18	novel	2688	12	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.6946019901589	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276059	78307966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78282293_78282441_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.6	chr8	+	3089	13	NNC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	59.952006267977	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276066	78307966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78278602_78278953_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ES.33306.7	chr8	+	4020	10	NIC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	1	junction_8	49.4393255777245	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAGTGTATGTAACAT	NA	False	NA	10	True	AATAAA	-15	NA	78276068	78307964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78307254_78307378_78307662
ES.33306.9	chr8	+	2567	12	NNC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	60.0788737775615	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGTGTATGTAACATT	NA	False	NA	11	True	AATAAA	-16	NA	78276085	78307965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294902_78294988_78298637_78299356_78303966_78304121_78307307_78307378_78307662
ES.33307.1	chr8	-	3878	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	52	-1252	52	1252	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	78337230	78321358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ES.33307.10	chr8	-	2313	11	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	26.5045279150563	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTACGTGTCTTC	NA	False	NA	-5	True	TTTAAA	-5	NA	78337351	78322611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336858_78337290
ES.33307.12	chr8	-	2386	11	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.8053156859696	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTACGTGTCTTC	NA	False	NA	-5	True	TTTAAA	-5	NA	78337258	78322611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323810_78324450_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336858_78337111
ES.33307.13	chr8	-	2592	11	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	44	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	26.7805899860328	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTACGTGTCTTC	NA	False	NA	-5	True	TTTAAA	-5	NA	78337238	78322611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323593_78323633_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ES.33307.15	chr8	-	2483	10	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	3	-233	intron_retention	FALSE	canonical	0	0	junction_1	28.2270337105897	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGCTTTGACTTTCTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	78337324	78322843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323806_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ES.33307.6	chr8	-	3746	10	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	-29	0	intron_retention	FALSE	canonical	3	13	junction_9	24.4606007214525	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337356	78322610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78332830_78332915_78333047_78336731_78336949_78337290
ES.33307.7	chr8	-	5734	8	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	71	junction_5	11.897521607804	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337313	78322610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78332830_78332915_78333047_78336731
ES.33307.8	chr8	-	1683	5	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	9177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.5121734001082	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78328105	78322610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323810_78324437_78324610_78325182_78325320_78326285_78326399_78328043
ES.33307.9	chr8	-	2755	11	NNC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_9	34.5585011249041	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTCTTACGTGTCTTC	NA	False	NA	-5	True	TTTAAA	-5	NA	78337251	78322611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336162_78336272_78336731
ES.33308.1	chr8	-	3629	8	FSM	ENSMUSG00000031616.8	ENSMUST00000034029.8	3625	8	-9	5	-9	-5	multi-exon	FALSE	canonical	0	0	junction_5	1.1780301787479	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAAATTTTCTGTGGTT	NA	False	NA	NA	False	TATAAA	-26	NA	78451074	78389664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78401541_78401741_78415697_78415826_78446656_78447132_78450724
ES.33309.1	chr8	+	1312	4	Antisense	novelGene_ENSMUSG00000110328.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	16.4991582276861	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCCCAGCTCTATGAG	NA	False	NA	NA	False	AATAAA	-10	NA	78792929	78929103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_78793056_78799076_78799137_78800521_78800627_78928082
ES.33309.10	chr8	+	4316	1	Intergenic	novelGene_27127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTAAAAATCGCGTT	NA	False	NA	NA	False	NA	NA	NA	78846483	78850799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78846500_78850800
ES.33309.2	chr8	+	3696	3	Intergenic	novelGene_27119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGAGGGTGTGGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	78792934	78803629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78793056_78799076_78799137_78800114
ES.33309.3	chr8	+	4259	4	Intergenic	novelGene_27120	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	9.89949493661167	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGAGGGTGTGGGGGA	NA	False	NA	NA	False	AATAAA	-22	NA	78792944	78803630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78793056_78794544_78795117_78799076_78799137_78800114
ES.33309.4	chr8	+	2673	3	Intergenic	novelGene_27121	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATTGCTTTAGAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	78792946	78802618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78793056_78799076_78799137_78800114
ES.33309.5	chr8	+	262	3	Intergenic	novelGene_27122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTAGGAACAAGTGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	78792955	78800216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78793056_78799076_78799137_78800114
ES.33309.6	chr8	+	3951	3	Intergenic	novelGene_27123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGATAGGTTGAGGGT	NA	False	NA	NA	False	AATAAA	-14	NA	78795392	78803622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78795776_78799076_78799137_78800114
ES.33309.7	chr8	+	7378	1	Intergenic	novelGene_27124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTCAGGGGTAGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	78806833	78814211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78806800_78814200
ES.33309.8	chr8	+	4293	1	Intergenic	novelGene_27125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGACGATGCCAGAGGT	NA	False	NA	NA	False	NA	NA	NA	78812759	78817052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_78812800_78817100
ES.33309.9	chr8	+	4632	1	FSM	ENSMUSG00000109948.2	ENSMUST00000210236.2	151	1	-2616	-1865	-2616	1865	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCTTCTCTTTGTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	78831972	78836604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_78832000_78836600
ES.3331.1	chr10	-	4252	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	2	-1334	-2	1301	multi-exon	TRUE	canonical	3	359	junction_12	245.119472004073	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGCTTTGCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80269479	80244046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.100	chr10	-	2961	20	NNC	ENSMUSG00000020167.15	novel	2946	19	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	418.061971045381	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269482	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80264384_80264472_80266770_80266903_80269153
ES.3331.103	chr10	-	2684	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-330	11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	417.630636765829	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269811	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269671
ES.3331.106	chr10	-	2718	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-7	11	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	295.753766937024	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269488	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.107	chr10	-	2656	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-330	11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	415.519888546599	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269811	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248862_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269671
ES.3331.110	chr10	-	3098	20	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	387.263415401697	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTATCGTCATATTT	NA	False	NA	-4	True	TATAAA	-24	NA	80269480	80245431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80265049_80265283_80266770_80266903_80269153
ES.3331.115	chr10	-	2942	19	NNC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	349.775254120502	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATTTATCGTCATATT	NA	False	NA	-5	True	TATAAA	-23	NA	80269477	80245432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251839_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.12	chr10	-	2785	17	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	331.594231516473	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269478	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.121	chr10	-	2936	19	NNC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	320.95578711709	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269509	80245441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246508_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.123	chr10	-	2784	19	NNC	ENSMUSG00000020167.15	novel	2842	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_10	379.101553220665	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253455_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.124	chr10	-	5197	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	340.777748757813	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGTTTCTGTTTCT	NA	False	NA	-23	True	TATAAA	-5	NA	80269472	80245450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.125	chr10	-	2901	19	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	357.687242685907	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATGTCTGTTTCTGTT	NA	False	NA	-26	True	TATAAA	-2	NA	80269508	80245453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252645_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.126	chr10	-	5127	12	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-37	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	368.327288882506	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCATGTCTGTTTCTG	NA	False	NA	-28	True	NA	NA	NA	80269518	80245455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253412_80263492_80263578_80266770_80266903_80269153
ES.3331.13	chr10	-	3159	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-236	27	-236	6	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269717	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.132	chr10	-	2653	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-318	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	395.873467750916	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	False	NA	29	True	NA	NA	NA	80269799	80245459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269671
ES.3331.135	chr10	-	2653	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-27	-72	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_17	447.542111267783	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGCCTTCCGTGTCTTTT	NA	False	NA	2	True	TTTAAA	-23	NA	80269508	80245531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80264384_80264472_80266770_80266903_80269153
ES.3331.136	chr10	-	5472	17	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-1	-73	intron_retention	FALSE	canonical	3	581	junction_3	177.200969505672	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGGCCTTCCGTGTCTTT	NA	False	NA	1	True	TTTAAA	-22	NA	80269482	80245532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.137	chr10	-	2604	18	NIC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	3	-74	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	339.805124286479	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCCTTCCGTGTCTT	NA	False	NA	0	True	TTTAAA	-21	NA	80269474	80245533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.139	chr10	-	2803	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-27	-74	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGGCCTTCCGTGTCTT	NA	False	NA	0	True	TTTAAA	-21	NA	80269508	80245533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.14	chr10	-	5665	17	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-36	6	intron_retention	FALSE	canonical	3	581	junction_3	177.200969505672	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269517	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.141	chr10	-	2542	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-6	-75	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCCTTCCGTGTCT	NA	False	NA	-1	True	TTTAAA	-20	NA	80269487	80245534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.142	chr10	-	2918	20	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	-75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	381.089275644278	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCCTTCCGTGTCT	NA	False	NA	-1	True	TTTAAA	-20	NA	80269477	80245534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80262964_80263124_80263504_80263578_80266770_80266903_80269153
ES.3331.143	chr10	-	5178	18	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	123	-75	intron_retention	FALSE	canonical	3	458	junction_1	239.067088208226	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCCTTCCGTGTCT	NA	False	NA	-1	True	TTTAAA	-20	NA	80269332	80245534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.144	chr10	-	3384	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	-75	intron_retention	FALSE	canonical	3	747	junction_5	179.663815236097	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCCTTCCGTGTCT	NA	False	NA	-1	True	TTTAAA	-20	NA	80269469	80245534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.146	chr10	-	3088	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	-326	188	-326	-76	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGAGGCCTTCCGTGTC	NA	False	NA	-2	True	TTTAAA	-19	NA	80269807	80245535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.149	chr10	-	4612	1	NIC	ENSMUSG00000020167.15	novel	2946	19	NA	NA	1173	-77	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1549	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGAGGCCTTCCGTGT	8870	False	NA	-3	True	TTTAAA	-18	NA	80250148	80245536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80245500_80250100
ES.3331.155	chr10	-	2653	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-2	-77	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_10	301.21829273227	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGAGGCCTTCCGTGT	NA	False	NA	-3	True	TTTAAA	-18	NA	80269457	80245536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253455_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.156	chr10	-	5202	19	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	-77	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	243.043333026016	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGAGGCCTTCCGTGT	NA	False	NA	-3	True	TTTAAA	-18	NA	80269481	80245536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.157	chr10	-	2637	18	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-2	-77	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	329.194518699611	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGAGGCCTTCCGTGT	NA	False	NA	-3	True	TTTAAA	-18	NA	80269457	80245536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.158	chr10	-	2573	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-330	-77	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	312.19701855569	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACGAGGCCTTCCGTGT	NA	False	NA	-3	True	TTTAAA	-18	NA	80269811	80245536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269671
ES.3331.16	chr10	-	2921	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	418.295217387061	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269480	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248897_80249038_80249172_80250995_80251117_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.163	chr10	-	2806	18	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	1	-109	intron_retention	FALSE	canonical	0	0	junction_6	362.328274561499	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTTTAAATGTAG	NA	False	NA	-35	True	AATAAA	-17	NA	80269480	80245568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252391_80252473_80252564_80252624_80252923_80253060_80253146_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.165	chr10	-	2759	19	NNC	ENSMUSG00000020167.15	novel	2842	19	NA	NA	-2	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	388.401174331673	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTTTTTTAAATGTA	NA	False	NA	-36	True	AATAAA	-16	NA	80269479	80245569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252645_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.166	chr10	-	1972	12	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-27	-110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	374.02998509754	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTTTTTTAAATGTA	NA	False	NA	-36	True	AATAAA	-16	NA	80269508	80245569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253488_80269340
ES.3331.167	chr10	-	2711	19	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	-7	-110	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	332.358277603188	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTTTTTTAAATGTA	NA	False	NA	-36	True	AATAAA	-16	NA	80269462	80245569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.18	chr10	-	3027	20	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_18	422.155227388079	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	NA	False	NA	-27	True	ATTAAA	-16	NA	80269481	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80264384_80264477_80266770_80266903_80269153
ES.3331.19	chr10	-	3149	20	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	372.272715988228	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGTTGATCTAAGGG	NA	False	NA	-28	True	ATTAAA	-15	NA	80269466	80245375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.2	chr10	-	3110	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	0	192	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	341.729465773406	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	80269477	80245155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248857_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.22	chr10	-	2721	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-27	4	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269508	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.23	chr10	-	5360	19	NIC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	359	junction_12	280.424721968941	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269479	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.24	chr10	-	3570	18	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-1	4	intron_retention	FALSE	canonical	3	359	junction_11	323.055256824491	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269482	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.25	chr10	-	4753	18	NIC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	1	4	intron_retention	FALSE	canonical	3	458	junction_2	261.732674841306	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269480	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.27	chr10	-	2860	19	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	329.228939257235	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269446	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248862_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.28	chr10	-	2620	19	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	-324	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	357.559042866772	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269805	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269787
ES.3331.3	chr10	-	3142	19	NIC	ENSMUSG00000020167.15	novel	2946	19	NA	NA	1	190	combination_of_known_junctions	FALSE	canonical	3	125	junction_2	339.153234787266	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	80269480	80245157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246456_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.30	chr10	-	5489	18	NIC	ENSMUSG00000020167.15	novel	2842	19	NA	NA	-4	4	intron_retention	FALSE	canonical	3	359	junction_11	280.301259090556	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269485	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.31	chr10	-	3047	18	NIC	ENSMUSG00000020167.15	novel	2946	19	NA	NA	-28	4	intron_retention	FALSE	canonical	3	359	junction_11	262.518109442886	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269509	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.32	chr10	-	2930	19	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	377.610469487628	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	False	NA	-29	True	ATTAAA	-14	NA	80269482	80245376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.33	chr10	-	2835	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_10	301.21829273227	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269483	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253455_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.35	chr10	-	2621	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-338	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	312.575901893355	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269819	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269787
ES.3331.4	chr10	-	3147	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	-24	-284	-2	190	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAAGGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	80269479	80245157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.40	chr10	-	7296	17	NIC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	458	junction_1	223.627620163521	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269475	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80248897_80249038_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.41	chr10	-	2732	19	NNC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	-330	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	350.129521889779	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269811	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269671
ES.3331.42	chr10	-	2285	17	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	249	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	330.59274417325	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269206	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.45	chr10	-	3049	18	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	581	junction_4	189.421172583313	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269487	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.54	chr10	-	2928	19	NNC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	317.47007246917	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269496	80245380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246238_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.57	chr10	-	5299	19	NNC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	320.208612556807	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAAGACCCAGTGTTG	NA	False	NA	-37	True	ATTAAA	-6	NA	80269466	80245384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80248857_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.59	chr10	-	2938	18	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	-2	15	intron_retention	FALSE	canonical	3	19	junction_1	338.457553573464	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	1	True	TATAAA	-29	NA	80269479	80245426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.6	chr10	-	3025	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	3	-78	-1	78	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTGCTCCTTGGCTA	NA	False	NA	78	True	NA	NA	NA	80269478	80245269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.61	chr10	-	3256	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-318	15	intron_retention	FALSE	canonical	3	747	junction_5	178.477509656783	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCGTCATATTTCATGG	NA	False	NA	1	True	TATAAA	-29	NA	80269799	80245426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.63	chr10	-	2746	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-27	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	447.123260272314	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269508	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80249038_80249172_80249631_80249709_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.64	chr10	-	2132	12	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	1782	13	intron_retention	FALSE	canonical	1	2	junction_11	366.766054649248	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	5108	False	NA	-1	True	TATAAA	-27	NA	80255912	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255854
ES.3331.65	chr10	-	2777	18	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-26	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	376.055543272929	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269507	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.67	chr10	-	2961	20	NNC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-30	13	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	479.925790662407	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269511	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248660_80248857_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80264384_80264472_80266770_80266903_80269153
ES.3331.68	chr10	-	2632	18	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-2	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	391.3197703027	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269479	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254642_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.70	chr10	-	2804	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	332.287520890858	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269481	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.74	chr10	-	2964	18	NIC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	2	13	intron_retention	FALSE	canonical	3	458	junction_2	258.734677262235	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269475	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.75	chr10	-	5007	15	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-28	13	intron_retention	FALSE	canonical	3	76	junction_1	313.657001014985	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269509	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80249038_80251123_80251198_80251355_80251686_80251761_80252393_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.77	chr10	-	3292	18	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	1	13	intron_retention	FALSE	canonical	3	581	junction_5	204.144378653051	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCGTCATATTTCAT	NA	False	NA	-1	True	TATAAA	-27	NA	80269480	80245428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.8	chr10	-	3254	19	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-318	7	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	272.362803836317	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTTGATCTAAGGGTC	NA	False	NA	-26	True	ATTAAA	-17	NA	80269799	80245373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.86	chr10	-	7711	13	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	1	12	intron_retention	FALSE	canonical	3	581	junction_3	184.205105340035	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269480	80245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253475_80254599_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.87	chr10	-	2831	19	NNC	ENSMUSG00000020167.15	novel	2826	19	NA	NA	-2	12	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	398.89541932135	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269479	80245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80248667_80248857_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.89	chr10	-	5478	18	NIC	ENSMUSG00000020167.15	novel	2829	19	NA	NA	-27	12	intron_retention	FALSE	canonical	3	581	junction_4	190.930158067068	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269508	80245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80246109_80246231_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.9	chr10	-	6015	11	NIC	ENSMUSG00000020167.15	novel	2842	19	NA	NA	1627	6	intron_retention	FALSE	canonical	3	458	junction_1	264.556307806108	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTGATCTAAGGGT	4953	False	NA	-27	True	ATTAAA	-16	NA	80256067	80245374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599
ES.3331.91	chr10	-	4699	18	ISM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	420	82	394	12	3prime_fragment	FALSE	canonical	3	747	junction_5	180.699582457586	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATCGTCATATTTCA	NA	False	NA	-2	True	TATAAA	-26	NA	80269061	80245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770
ES.3331.93	chr10	-	9955	10	NIC	ENSMUSG00000020167.15	novel	2928	19	NA	NA	-30	11	intron_retention	FALSE	canonical	3	359	junction_5	276.834531850149	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269511	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80252473_80252564_80252624_80252923_80253060_80253146_80253475_80254599_80254653_80255300_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.3331.95	chr10	-	2635	19	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	-326	11	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_18	312.386433685295	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269807	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269711
ES.3331.97	chr10	-	5439	18	NNC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	1	11	intron_retention	FALSE	canonical	3	15	junction_1	306.774400613826	1549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTATCGTCATATTTC	NA	False	NA	-3	True	TATAAA	-25	NA	80269480	80245430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80246109_80246238_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ES.33310.1	chr8	-	1905	1	Intergenic	novelGene_27126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGAGCTACGGCTC	1574	False	NA	NA	False	NA	NA	NA	78819565	78817660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78817700_78819600
ES.33311.1	chr8	-	7249	1	Intergenic	novelGene_27128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTAGCTCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	78873740	78866491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78866500_78873700
ES.33311.2	chr8	-	91	1	Intergenic	novelGene_27129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	78873746	78873655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_78873700_78873700
ES.33312.1	chr8	+	156	1	Intergenic	novelGene_27130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	79136234	79136390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79136200_79136400
ES.33313.1	chr8	+	221	1	Intergenic	novelGene_27131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAACTACTTCTTACAG	NA	False	NA	NA	False	NA	NA	NA	79142939	79143160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79142900_79143200
ES.33314.1	chr8	-	3265	2	FSM	ENSMUSG00000031688.5	ENSMUST00000034115.5	3204	2	-60	-1	-60	1	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGTTTTTAATCATTTA	NA	False	NA	NA	False	ATTAAA	-36	NA	79163334	79159637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79162308_79162739
ES.33315.1	chr8	-	3123	1	FSM	ENSMUSG00000110057.2	ENSMUST00000209570.2	377	1	-2626	-120	-2626	120	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	79215665	79212542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79212500_79215700
ES.33316.1	chr8	+	1513	3	Antisense	novelGene_ENSMUSG00000037070.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTTCTTTTTATCTTG	NA	False	NA	NA	False	NA	NA	NA	79216645	79234608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_79216740_79232511_79232622_79233299
ES.33316.2	chr8	+	161	1	Intergenic	novelGene_27132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	79217818	79217979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79217800_79218000
ES.33317.1	chr8	+	1187	7	NNC	ENSMUSG00000031684.12	novel	3517	11	NA	NA	-675	-114103	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.6632301492381	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGGCTAACTGGTCCAC	9367	False	NA	NA	False	NA	NA	NA	79235299	79260617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235714_79242214_79242298_79251790_79251928_79257711_79257788_79258251_79258362_79260172_79260329_79260406
ES.33317.10	chr8	+	3286	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-18	149	intron_retention	FALSE	canonical	1	3	junction_9	39.4031724611103	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTACTCATTCCAACCT	NA	False	NA	NA	False	TATAAA	-20	NA	79235956	79460357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79456246_79456393_79458237
ES.33317.11	chr8	+	3645	13	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	-6	17137	intron_retention	FALSE	non_canonical	0	0	junction_12	37.1673206220495	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCTATTTTAAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	79235968	79477769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79460631_79477745
ES.33317.12	chr8	+	3535	11	FSM	ENSMUSG00000031684.12	ENSMUST00000209992.2	939	11	-231	-2365	-2	0	multi-exon	FALSE	canonical	0	0	junction_6	40.2571732738403	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235972	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.13	chr8	+	3221	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-24	398	-2	26	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGCTCATTAGGATT	NA	False	NA	NA	False	AATAAA	-16	NA	79235972	79460234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.14	chr8	+	3540	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	3	0	intron_retention	FALSE	canonical	1	3	junction_9	39.4031724611103	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235977	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79456246_79456393_79458237
ES.33317.15	chr8	+	3273	13	FSM	ENSMUSG00000031684.12	ENSMUST00000211286.2	2752	13	-97	-424	1	0	multi-exon	FALSE	canonical	2	5	junction_12	35.903806669117	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235981	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79458779_79459115
ES.33317.16	chr8	+	912	6	NNC	ENSMUSG00000031684.12	novel	3485	10	NA	NA	3	-43910	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	52.3159631470166	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACATTTGTTCCCAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	79235999	79330810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79330537
ES.33317.17	chr8	+	3825	13	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	48.1965737601982	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79235999	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79243058_79243293_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.18	chr8	+	3434	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_2	38.6808738267377	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236019	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79236304_79242214_79242298_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.19	chr8	+	3692	13	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_10	47.8797684019276	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236019	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79441611_79441733_79456246_79456393_79458237
ES.33317.2	chr8	+	3534	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-505	2	intron_retention	FALSE	canonical	0	0	junction_1	38.6674741057521	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	9537	False	NA	34	True	ATTAAA	-19	NA	79235469	79460634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235714_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.20	chr8	+	3091	4	NNC	ENSMUSG00000031684.12	novel	3485	10	NA	NA	2	-118683	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	57.5171472017017	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAACTGAAGAG	NA	False	NA	NA	False	NA	NA	NA	79236022	79256037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79254233_79255752
ES.33317.21	chr8	+	2688	10	NNC	ENSMUSG00000031684.12	novel	3517	11	NA	NA	2	-5011	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	41.555852643026	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATGGGATAGACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	79236022	79434375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79432641
ES.33317.22	chr8	+	3511	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_4	40.3669419203387	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236040	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.23	chr8	+	1324	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	45	2226	21	139	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCTTACGATGTTTT	NA	False	NA	NA	False	NA	NA	NA	79236041	79458406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.24	chr8	+	3471	11	FSM	ENSMUSG00000031684.12	ENSMUST00000210630.2	3494	11	21	2	21	-2	multi-exon	FALSE	canonical	0	0	junction_3	38.9035988052519	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAATCTCTGGAAATGTCG	NA	False	NA	29	True	ATTAAA	-14	NA	79236041	79460629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.25	chr8	+	3488	14	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.7264081661886	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	NA	False	NA	34	True	ATTAAA	-19	NA	79236042	79460634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79255908_79256183_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79458779_79459115
ES.33317.26	chr8	+	3268	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	47	280	23	144	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTATGTTTACTCATTCC	NA	False	NA	NA	False	TATAAA	-15	NA	79236043	79460352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.27	chr8	+	3440	13	NNC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_12	37.1673206220495	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79236059	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79458293_79458384
ES.33317.28	chr8	+	3317	10	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_2	40.5654478042035	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79236061	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79236304_79242214_79242298_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.29	chr8	+	1619	11	FSM	ENSMUSG00000031684.12	ENSMUST00000211332.2	3517	11	87	1811	-17	-1811	multi-exon	FALSE	canonical	0	0	junction_10	40.2821300330556	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGCTATTGACAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	79236061	79437575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79436945
ES.33317.3	chr8	+	3316	13	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-378	2	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_1	46.5035094255142	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	9664	False	NA	34	True	ATTAAA	-19	NA	79235596	79460634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235960_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237_79458779_79459115
ES.33317.30	chr8	+	3590	12	NNC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_9	49.604551910565	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236061	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79441597_79441733_79456246_79456393_79458237
ES.33317.31	chr8	+	3285	14	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	53.0509412439016	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79236089	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79441611_79441733_79456246_79456393_79458237_79458779_79459115
ES.33317.32	chr8	+	3293	4	NNC	ENSMUSG00000031684.12	novel	3485	10	NA	NA	55	-114102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.2039535270336	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGCTAACTGGTCCACC	NA	False	NA	NA	False	NA	NA	NA	79236133	79260618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242218_79242298_79251790_79251928_79257711
ES.33317.33	chr8	+	3699	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	5360	0	intron_retention	FALSE	canonical	1	4	junction_1	37.6161561913438	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79241563	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79241975_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.34	chr8	+	3614	11	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	5371	0	intron_retention	FALSE	canonical	1	3	junction_9	50.5312774427878	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79241574	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79241975_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79456246_79456393_79458237
ES.33317.35	chr8	+	2602	7	NNC	ENSMUSG00000031684.12	novel	121	2	NA	NA	5383	-30008	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.5684544748633	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTAAAAAGTAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	79241586	79344712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79241975_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79341307_79341440_79342965
ES.33317.36	chr8	+	5986	1	NIC	ENSMUSG00000031684.12	novel	3517	11	NA	NA	10620	-121911	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAGCAATTGAAACAT	NA	False	NA	NA	False	NA	NA	NA	79246823	79252809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79246800_79252800
ES.33317.37	chr8	+	3418	1	Intergenic	novelGene_27136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAAGACATTTAAACT	NA	False	NA	NA	False	NA	NA	NA	79335246	79338664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79335200_79338700
ES.33317.38	chr8	+	2853	3	Intergenic	novelGene_27137	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGAATCATATACGTATA	NA	False	NA	NA	False	NA	NA	NA	79339353	79342435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79339532_79339588_79339853_79340024
ES.33317.39	chr8	+	169	1	Intergenic	novelGene_27138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	79420034	79420203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79420000_79420200
ES.33317.4	chr8	+	3986	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	-387	-4	-365	4	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAATGTCGTGGCTCA	9677	False	NA	36	True	ATTAAA	-21	NA	79235609	79460636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.40	chr8	+	8857	2	ISM	ENSMUSG00000031684.12	ENSMUST00000210703.2	3315	8	145553	-3	26130	2	3prime_fragment	FALSE	canonical	3	131	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	NA	False	NA	34	True	ATTAAA	-19	NA	79449932	79460634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_79456393_79458237
ES.33317.5	chr8	+	3633	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-360	0	intron_retention	FALSE	canonical	1	5	junction_1	37.354234605667	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	9682	False	NA	32	True	ATTAAA	-17	NA	79235614	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235960_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.6	chr8	+	3674	12	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-355	0	intron_retention	FALSE	canonical	0	0	junction_9	56.0637181773361	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	9687	False	NA	31	True	ATTAAA	-16	NA	79235619	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235960_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79441611_79441733_79456246_79456393_79458237
ES.33317.7	chr8	+	3706	13	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-338	-1	intron_retention	FALSE	canonical	0	0	junction_5	55.3594315963113	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATCTCTGGAAATGTCGT	9704	False	NA	30	True	ATTAAA	-15	NA	79235636	79460630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235960_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79370785_79370883_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.8	chr8	+	3557	13	NNC	ENSMUSG00000031684.12	novel	680	4	NA	NA	-333	0	intron_retention	FALSE	canonical	0	0	junction_1	55.3207817089463	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	9709	False	NA	32	True	ATTAAA	-17	NA	79235641	79460632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79235714_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79416165_79416363_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33317.9	chr8	+	3744	13	NNC	ENSMUSG00000031684.12	novel	2752	13	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_6	48.2363250627114	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTGGAAATGTCGTG	NA	False	NA	31	True	ATTAAA	-16	NA	79235946	79460631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79315778_79315879_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ES.33318.1	chr8	-	174	1	Intergenic	novelGene_27133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAGAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79223053	79222879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_79222900_79223100
ES.33319.1	chr8	-	6181	1	Genic_Genomic	ENSMUSG00000037070.11	novel	NA	NA	NA	NA	-3	2567	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTCAGTCGCATGTAGT	NA	False	NA	NA	False	NA	NA	NA	79235511	79229330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_79229300_79235500
ES.33319.2	chr8	-	2107	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	-424	-61	-405	53	multi-exon	FALSE	canonical	3	608	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTTTGAGGAACAATC	NA	False	NA	NA	False	AATAAA	-17	NA	79235932	79231844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79233447_79235427
ES.33319.3	chr8	-	2020	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	-294	-31	-294	31	multi-exon	FALSE	canonical	3	249	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGAGGTCAGCAATT	NA	False	NA	NA	False	NA	NA	NA	79235821	79231866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79233493_79235427
ES.33319.4	chr8	-	3661	1	Genic_Genomic	ENSMUSG00000037070.11	novel	NA	NA	NA	NA	-31	0	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235558	79231897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_79231900_79235600
ES.33319.5	chr8	-	2347	2	NNC	ENSMUSG00000037070.11	novel	1622	2	NA	NA	177	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTCTTGATTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	79235331	79231899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79233447_79234531
ES.33319.6	chr8	-	1638	2	NNC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTCTTGATTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	79235524	79231899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79233441_79235427
ES.33319.7	chr8	-	1616	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	-13	92	-13	-84	multi-exon	FALSE	canonical	3	249	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTGCTTTCAACAAGC	NA	False	NA	NA	False	AGTAAA	-21	NA	79235540	79231989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79233493_79235427
ES.3332.1	chr10	-	1945	7	NIC	ENSMUSG00000003341.10	novel	4412	28	NA	NA	12757	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3.1091263510296	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTCTCCAACTCTTCT	NA	False	NA	NA	False	AATAAA	-37	NA	80362167	80355418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80356297_80357603_80357732_80360162_80360247_80361011_80361236_80361321_80361689_80361817_80361918_80362003
ES.3332.2	chr10	-	2065	8	NIC	ENSMUSG00000003341.10	novel	4412	28	NA	NA	12774	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2.71052370871575	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCTTCTCCAACTCTT	NA	False	NA	NA	False	AATAAA	-35	NA	80362150	80355420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80356297_80357603_80357732_80357844_80357984_80360162_80360247_80361011_80361236_80361321_80361689_80361817_80361918_80362003
ES.3332.3	chr10	-	2226	4	NIC	ENSMUSG00000003341.10	novel	3823	27	NA	NA	12757	-21	intron_retention	FALSE	canonical	1	1	junction_2	4.08248290463863	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGCTTCTTTGGGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	80362167	80355438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80356297_80357603_80357732_80360162_80360247_80361011
ES.3332.4	chr10	-	2231	7	NIC	ENSMUSG00000003341.10	novel	4412	28	NA	NA	12775	-23	intron_retention	FALSE	canonical	0	0	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGGGCTTCTTTGGGC	NA	False	NA	NA	False	AATAAA	-15	NA	80362149	80355440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80356297_80357603_80357732_80359485_80359726_80360162_80360247_80361011_80361236_80361321_80361689_80361817
ES.33320.1	chr8	-	177	1	Intergenic	novelGene_27134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGGG	NA	False	NA	NA	False	NA	NA	NA	79249236	79249059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_79249100_79249200
ES.33321.1	chr8	-	5684	1	Intergenic	novelGene_27135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCTGCATATACCGGCT	6339	False	NA	NA	False	NA	NA	NA	79288605	79282921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_79282900_79288600
ES.33322.1	chr8	-	2806	1	Antisense	novelGene_ENSMUSG00000031684.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTACCAGCTTTCTAAC	NA	False	NA	NA	False	NA	NA	NA	79316680	79313874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_79313900_79316700
ES.33323.1	chr8	-	3143	1	Antisense	novelGene_ENSMUSG00000031684.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTATCTGCATAAGGACT	NA	False	NA	NA	False	NA	NA	NA	79439340	79436197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_79436200_79439300
ES.33324.1	chr8	-	3447	5	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	33	75405	intron_retention	FALSE	canonical	0	0	junction_1	407.554520892604	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAAGGCTCTAAGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	79547736	79456088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79459158_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33324.10	chr8	-	693	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	-1	3100	-1	72	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTACCTAAGATTCC	NA	False	NA	65	True	ACTAAA	-19	NA	79547770	79534593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33324.11	chr8	-	894	6	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	39	6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	523.197324152179	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCAGTCTTTATCATT	NA	False	NA	-1	True	NA	NA	NA	79547730	79534659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79534875_79536575_79536690_79539604_79539710_79546114_79546422_79546615_79546715_79547676
ES.33324.12	chr8	-	5325	1	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	-144	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79539987	79534662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79534700_79540000
ES.33324.13	chr8	-	3520	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	18	3	intron_retention	FALSE	canonical	3	636	junction_3	248.967199981577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGTCTTTATC	NA	False	NA	-4	True	NA	NA	NA	79547751	79534662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79534875_79536575_79539710_79546615_79546715_79547676
ES.33324.14	chr8	-	7274	5	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	60	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	482.107029092089	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547709	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79534875_79536575_79536690_79539604_79546422_79546615_79546715_79547676
ES.33324.15	chr8	-	508	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	15	1584	15	2	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547754	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ES.33324.16	chr8	-	477	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	40	2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	494.10997426349	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547729	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79534875_79536575_79536690_79546615_79546715_79547676
ES.33324.17	chr8	-	7510	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	18	2	intron_retention	FALSE	canonical	3	636	junction_3	255.680790570326	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547751	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79534875_79536575_79536690_79539604_79546715_79547676
ES.33324.18	chr8	-	712	6	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	522.067275358263	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547744	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79534875_79536575_79536690_79539604_79539710_79546306_79546422_79546615_79546715_79547676
ES.33324.19	chr8	-	1613	6	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	70	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	524.560234863452	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTCAGTCTTTAT	NA	False	NA	-5	True	NA	NA	NA	79547699	79534663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79534875_79536575_79536690_79539604_79539710_79545360_79546422_79546615_79546715_79547676
ES.33324.2	chr8	-	2181	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	23	1588	23	-2	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCACAGTTGCCACCAT	NA	False	NA	NA	False	AGTAAA	-25	NA	79547746	79533081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33324.20	chr8	-	5268	2	FSM	ENSMUSG00000031683.17	ENSMUST00000126174.2	473	2	-4795	0	-1791	0	multi-exon	FALSE	canonical	3	1217	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTATGTCTCAGTCTTT	NA	False	NA	-7	True	NA	NA	NA	79541634	79534665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575
ES.33324.21	chr8	-	81	1	Intergenic	novelGene_27139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAGAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79540514	79540433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_79540400_79540500
ES.33324.3	chr8	-	4937	4	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	73	-111	intron_retention	FALSE	canonical	3	636	junction_3	248.967199981577	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTCGTGGTCTGTGA	NA	False	NA	-1	True	NA	NA	NA	79547696	79533190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79534875_79536575_79539710_79546615_79546715_79547676
ES.33324.4	chr8	-	2080	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	15	1697	15	-111	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTCGTGGTCTGTGA	NA	False	NA	-1	True	NA	NA	NA	79547754	79533190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33324.5	chr8	-	1300	6	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	32	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	433.008360196429	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTCGTGGTCTGTGA	NA	False	NA	-1	True	NA	NA	NA	79547737	79533190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79533682_79534444_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33324.6	chr8	-	1993	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	3	111	3	-111	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTCGTGGTCTGTGA	NA	False	NA	-1	True	NA	NA	NA	79547766	79533190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ES.33324.7	chr8	-	3987	5	NNC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	27	-632	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	496.73402088039	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGTAATTCATCAC	NA	False	NA	NA	False	AATAAA	-13	NA	79547742	79533711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79534875_79536575_79536690_79536832_79539372_79539604_79539710_79547676
ES.33324.8	chr8	-	1443	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	32	632	32	-632	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGTAATTCATCAC	NA	False	NA	NA	False	AATAAA	-13	NA	79547737	79533711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ES.33324.9	chr8	-	1531	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	42	2219	42	-633	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTTCAGTAATTCATCA	NA	False	NA	NA	False	AATAAA	-12	NA	79547727	79533712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ES.33325.1	chr8	+	7990	15	FSM	ENSMUSG00000071064.16	ENSMUST00000098614.9	7581	15	-386	-23	-386	0	multi-exon	TRUE	canonical	2	3	junction_2	2.87494454249973	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTTCTATTTCTT	4660	False	NA	NA	False	ATTAAA	-21	NA	79754679	79920395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ES.33325.10	chr8	+	4817	10	ISM	ENSMUSG00000071064.16	ENSMUST00000119254.8	4549	15	89585	-2337	-155	1	3prime_fragment	FALSE	canonical	0	0	junction_8	3.62092683040007	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACGTGTGTTTGCAGT	NA	False	NA	NA	False	TATAAA	-15	NA	79844800	79919822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912988_79914777_79914811_79916295
ES.33325.11	chr8	+	4738	9	NNC	ENSMUSG00000071064.16	novel	5230	10	NA	NA	-32	74	intron_retention	FALSE	canonical	0	0	junction_8	3.53553390593274	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCATTTTTCAGAGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	79844923	79919895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912992_79916295
ES.33325.12	chr8	+	2058	1	Intergenic	novelGene_27140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCACGAAAGCATACCA	NA	False	NA	NA	False	AGTAAA	-21	NA	79850026	79852084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_79850000_79852100
ES.33325.13	chr8	+	4811	5	ISM	ENSMUSG00000071064.16	ENSMUST00000145827.8	3115	9	58422	-568	-70	-6	intron_retention	FALSE	canonical	0	0	junction_4	4.03112887414927	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTATACTCTGGCTTCTA	NA	False	NA	NA	False	ATTAAA	-15	NA	79905533	79920389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_79905709_79906673_79906841_79912226_79912419_79912804_79912988_79916295
ES.33325.14	chr8	+	4506	4	ISM	ENSMUSG00000071064.16	ENSMUST00000148713.8	5230	10	67268	0	6620	0	3prime_fragment	FALSE	canonical	2	4	junction_2	1.4142135623731	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGCTTCTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	79912223	79920395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_79912419_79912804_79912983_79914777_79914811_79916295
ES.33325.2	chr8	+	391	1	Genic_Genomic	ENSMUSG00000071064.16	novel	NA	NA	NA	NA	-353	-43363	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4693	False	NA	NA	False	NA	NA	NA	79754712	79755103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_79754700_79755100
ES.33325.3	chr8	+	7455	15	NIC	ENSMUSG00000071064.16	novel	7581	15	NA	NA	-352	55	intron_retention	FALSE	canonical	2	3	junction_2	2.89704282723904	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAGAAAATCT	4694	False	NA	NA	False	NA	NA	NA	79754713	79919876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905518_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ES.33325.4	chr8	+	7457	15	FSM	ENSMUSG00000071064.16	ENSMUST00000098614.9	7581	15	-352	476	-352	75	multi-exon	FALSE	canonical	2	3	junction_2	2.87494454249973	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCATTTTTCAGAGTCCA	4694	False	NA	NA	False	AATAAA	-15	NA	79754713	79919896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ES.33325.5	chr8	+	4057	13	NNC	ENSMUSG00000071064.16	novel	4511	14	NA	NA	-346	-1891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.60555127546399	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATACAATGAGTTTTGGT	4700	False	NA	NA	False	ATTAAA	-29	NA	79754719	79914499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79755359_79796999_79797173_79802686_79802813_79803048_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804
ES.33325.6	chr8	+	5804	15	NNC	ENSMUSG00000071064.16	novel	7581	15	NA	NA	-173	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.77424137532083	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAGAAAATCT	4873	False	NA	NA	False	NA	NA	NA	79754892	79919876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847174_79863188_79863293_79902461_79902600_79905518_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79916295_79917493_79918935
ES.33325.7	chr8	+	7044	14	FSM	ENSMUSG00000071064.16	ENSMUST00000238669.2	4511	14	-121	-2412	29	76	multi-exon	FALSE	canonical	2	2	junction_13	3.038218101251	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTTTTCAGAGTCCAC	5075	False	NA	NA	False	AATAAA	-16	NA	79755094	79919897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79916295
ES.33325.8	chr8	+	3643	9	NNC	ENSMUSG00000071064.16	novel	4511	14	NA	NA	69	-33239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3.90512483795333	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGAATGCCTCTCCTG	5265	False	NA	NA	False	AATGAA	-15	NA	79755284	79870553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79869315
ES.33325.9	chr8	+	2505	7	ISM	ENSMUSG00000071064.16	ENSMUST00000119254.8	4549	15	31721	53961	31721	-40268	internal_fragment	FALSE	canonical	2	3	junction_1	2.80871659105879	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTGTCCATGTAGT	NA	False	NA	NA	False	NA	NA	NA	79786936	79863524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188
ES.33326.1	chr8	-	1080	1	Antisense	novelGene_ENSMUSG00000071064.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCAGACACTGGCAGGA	NA	False	NA	NA	False	AATAAA	-16	NA	79756329	79755249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_79755200_79756300
ES.33327.1	chr8	-	185	1	Intergenic	novelGene_27141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	79940755	79940570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_79940600_79940800
ES.33328.1	chr8	-	1408	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	-65	4307	-65	3	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGAGTTTCCCTGAGTG	NA	False	NA	-3	True	AATAAA	-20	NA	80021631	79994533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
ES.33328.2	chr8	-	4465	6	NIC	ENSMUSG00000037022.4	novel	5650	7	NA	NA	5	2	intron_retention	FALSE	canonical	3	29	junction_5	19.1687245272084	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGAGTTTCCCTGAGT	NA	False	NA	-4	True	AATAAA	-19	NA	80021561	79994534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_79994845_79995761_79995912_79997518_80000904_80004830_80004954_80007805_80008284_80021542
ES.33328.3	chr8	-	5476	6	ISM	ENSMUSG00000037022.4	ENSMUST00000210231.2	1685	8	8863	-1	8863	1	intron_retention	FALSE	canonical	2	9	junction_5	24.0083318870762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGAGTTTCCCTGAG	NA	False	NA	-5	True	AATAAA	-18	NA	80012446	79994535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007809
ES.33328.4	chr8	-	2093	7	ISM	ENSMUSG00000037022.4	ENSMUST00000210231.2	1685	8	9691	0	9691	0	3prime_fragment	FALSE	canonical	2	3	junction_6	27.1503018194805	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAGTTTCCCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	80011618	79994536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007809_80008284_80010837
ES.33328.5	chr8	-	1682	9	NNC	ENSMUSG00000037022.4	novel	1685	8	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.8998327754521	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTTGTAGAGTTTCCC	NA	False	NA	-9	True	AATAAA	-14	NA	80021573	79994539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80001501_80001606_80004830_80004954_80007809_80008284_80010837_80011076_80021542
ES.33329.1	chr8	+	3634	2	NIC	ENSMUSG00000097174.3	novel	3784	3	NA	NA	-18	-1272	intron_retention	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTGGGGAAATTATGA	NA	False	NA	NA	False	AATAAA	-19	NA	80021733	80034318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80023281_80032231
ES.3333.1	chr10	-	5246	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	12	-8	12	5	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCCTGGGAG	9433	False	NA	NA	False	AATAAA	-22	NA	80397382	80376750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.12	chr10	-	4880	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	4	intron_retention	FALSE	canonical	3	16	junction_12	135.51300730162	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9431	False	NA	-1	True	AATAAA	-18	NA	80397384	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.13	chr10	-	3755	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	85	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	102.914294637899	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9506	False	NA	-1	True	AATAAA	-18	NA	80397309	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385841_80386900_80397097
ES.3333.14	chr10	-	4851	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	-253	4	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9168	False	NA	-1	True	AATAAA	-18	NA	80397647	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.15	chr10	-	4948	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	134.629650735426	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9435	False	NA	-1	True	AATAAA	-18	NA	80397380	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381600_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.16	chr10	-	4623	16	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	22	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	130.371707905597	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9443	False	NA	-1	True	AATAAA	-18	NA	80397372	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80385490_80385627_80386900_80397097
ES.3333.17	chr10	-	5320	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	18	4	intron_retention	FALSE	canonical	3	17	junction_7	102.115319426316	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9439	False	NA	-1	True	AATAAA	-18	NA	80397376	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.18	chr10	-	4503	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	4	intron_retention	FALSE	non_canonical	0	0	junction_13	103.061998380606	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9431	False	NA	-1	True	AATAAA	-18	NA	80397384	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80385783_80385867_80386900_80397097
ES.3333.19	chr10	-	4666	14	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	13	3	intron_retention	FALSE	non_canonical	0	0	junction_4	141.445579892077	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9434	False	NA	-2	True	AATAAA	-17	NA	80397381	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378858_80379134_80379332_80379480_80379551_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.20	chr10	-	5469	12	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	3	intron_retention	FALSE	canonical	3	335	junction_9	34.6746388375192	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9431	False	NA	-2	True	AATAAA	-17	NA	80397384	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.21	chr10	-	5676	12	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	3	intron_retention	FALSE	canonical	3	335	junction_9	33.5485339803605	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9430	False	NA	-2	True	AATAAA	-17	NA	80397385	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.22	chr10	-	4418	16	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	99.9011956329297	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9433	False	NA	-2	True	AATAAA	-17	NA	80397382	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80385783_80385866_80386900_80397097
ES.3333.24	chr10	-	4853	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	3	intron_retention	FALSE	canonical	3	16	junction_12	102.568839634196	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9433	False	NA	-2	True	AATAAA	-17	NA	80397382	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.25	chr10	-	3073	16	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	99.9011956329297	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9432	False	NA	-2	True	AATAAA	-17	NA	80397383	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80385309_80386738_80386900_80397097
ES.3333.26	chr10	-	4805	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	131.207286538577	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9422	False	NA	-2	True	AATAAA	-17	NA	80397393	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.27	chr10	-	5056	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	15	3	intron_retention	FALSE	canonical	3	16	junction_12	102.726211631759	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9436	False	NA	-2	True	AATAAA	-17	NA	80397379	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.28	chr10	-	5387	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	3	intron_retention	FALSE	canonical	3	335	junction_10	33.2518796461193	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9430	False	NA	-2	True	AATAAA	-17	NA	80397385	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.29	chr10	-	4793	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	3	intron_retention	FALSE	canonical	3	315	junction_12	35.9516440522429	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9431	False	NA	-2	True	AATAAA	-17	NA	80397384	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.3	chr10	-	6545	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	-2	intron_retention	FALSE	canonical	3	315	junction_12	34.5190111413626	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAAAGCCCAGGTCT	9431	False	NA	NA	False	AATAAA	-12	NA	80397384	80376760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.30	chr10	-	5304	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	3	intron_retention	FALSE	canonical	3	335	junction_11	31.9479976870698	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9430	False	NA	-2	True	AATAAA	-17	NA	80397385	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.31	chr10	-	4524	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	101.704177868554	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9432	False	NA	-2	True	AATAAA	-17	NA	80397383	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.32	chr10	-	4851	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	3	intron_retention	FALSE	canonical	3	16	junction_12	102.437107274393	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9435	False	NA	-2	True	AATAAA	-17	NA	80397380	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.34	chr10	-	6868	12	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	3	intron_retention	FALSE	canonical	1	1	junction_8	115.510723626542	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9435	False	NA	-2	True	AATAAA	-17	NA	80397380	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381600_80381709_80381842_80382135_80383821_80384265_80386900_80397097
ES.3333.36	chr10	-	3370	10	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	122.017404142115	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9431	False	NA	-2	True	AATAAA	-17	NA	80397384	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80377915_80380174_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.37	chr10	-	4607	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	3	intron_retention	FALSE	canonical	3	7	junction_7	105.339462533582	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9432	False	NA	-2	True	AATAAA	-17	NA	80397383	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.38	chr10	-	8056	7	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	3	intron_retention	FALSE	canonical	3	339	junction_2	29.9202644076255	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9433	False	NA	-2	True	AATAAA	-17	NA	80397382	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80379246_80379480_80379555_80379836_80380708_80381296_80383821_80384265_80386900_80397097
ES.3333.39	chr10	-	4747	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	131.441788931645	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9432	False	NA	-2	True	AATAAA	-17	NA	80397383	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379158_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.4	chr10	-	6320	13	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	-4	intron_retention	FALSE	canonical	0	0	junction_9	109.741236045932	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCACAAAGCCCAGGT	9433	False	NA	NA	False	AATAAA	-10	NA	80397382	80376762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381840_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.40	chr10	-	4488	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	3	intron_retention	FALSE	canonical	0	0	junction_7	143.515654391971	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9430	False	NA	-2	True	AATAAA	-17	NA	80397385	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.41	chr10	-	3136	16	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	99.9011956329297	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTCATAGTGTGTGGTG	9433	False	NA	-2	True	AATAAA	-17	NA	80397382	80377494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80385293_80386658_80386900_80397097
ES.3333.44	chr10	-	5072	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	2	intron_retention	FALSE	canonical	3	315	junction_11	37.2364815141758	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTCATAGTGTGTGGT	9433	False	NA	-3	True	AATAAA	-16	NA	80397382	80377495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379951_80380116_80380255_80380593_80380708_80381296_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.46	chr10	-	5390	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	29	2	intron_retention	FALSE	canonical	3	17	junction_6	106.079241869253	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTCATAGTGTGTGGT	9450	False	NA	-3	True	AATAAA	-16	NA	80397365	80377495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.47	chr10	-	4388	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	100.460007056298	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTCATAGTGTGTGGT	9430	False	NA	-3	True	AATAAA	-16	NA	80397385	80377495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.48	chr10	-	4577	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	19	2	intron_retention	FALSE	canonical	3	315	junction_12	36.5004660746769	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTCATAGTGTGTGGT	9440	False	NA	-3	True	AATAAA	-16	NA	80397375	80377495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.49	chr10	-	5374	14	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	1	intron_retention	FALSE	canonical	0	0	junction_12	161.624262927519	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCATAGTGTGTGG	9431	False	NA	-4	True	AATAAA	-15	NA	80397384	80377496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379332_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383784_80384265_80386900_80397097
ES.3333.5	chr10	-	4776	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	9	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	98.9900273270196	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTGTGTGGTGCTTTGG	9433	False	NA	4	True	AATAAA	-23	NA	80397382	80377488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.50	chr10	-	4609	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	1	intron_retention	FALSE	canonical	3	17	junction_6	102.372275740245	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCATAGTGTGTGG	9431	False	NA	-4	True	AATAAA	-15	NA	80397384	80377496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.51	chr10	-	3316	14	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	1	intron_retention	FALSE	non_canonical	0	0	junction_13	136.568859021513	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCATAGTGTGTGG	9432	False	NA	-4	True	AATAAA	-15	NA	80397383	80377496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80385430_80397163
ES.3333.53	chr10	-	4813	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	1	intron_retention	FALSE	canonical	3	17	junction_7	102.613539367563	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTTCATAGTGTGTGG	9433	False	NA	-4	True	AATAAA	-15	NA	80397382	80377496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.54	chr10	-	5138	13	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	-1	intron_retention	FALSE	canonical	1	1	junction_7	164.810054810581	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATTTCATAGTGTGT	9430	False	NA	-6	True	AATAAA	-13	NA	80397385	80377498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381600_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
ES.3333.55	chr10	-	4486	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	102.914294637899	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATTTCATAGTGTGT	9435	False	NA	-6	True	AATAAA	-13	NA	80397380	80377498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385176_80386900_80397097
ES.3333.56	chr10	-	4440	15	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_2	97.414981247386	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGATTTCATAGTGTGT	9435	False	NA	-6	True	AATAAA	-13	NA	80397380	80377498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378797_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.57	chr10	-	4660	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	-3	intron_retention	FALSE	canonical	3	315	junction_11	37.9893077062481	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGATTTCATAGTGT	9435	False	NA	-8	True	AATAAA	-11	NA	80397380	80377500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.58	chr10	-	4624	16	NNC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	130.371707905597	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGATTTCATAGTGT	9430	False	NA	-8	True	AATAAA	-11	NA	80397385	80377500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80385024_80385166_80386900_80397097
ES.3333.59	chr10	-	3927	11	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	-671	-3	intron_retention	FALSE	canonical	3	339	junction_3	29.9866637023861	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGATTTCATAGTGT	3228	False	NA	-8	True	AATAAA	-11	NA	80384426	80377500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80383821_80384265
ES.3333.6	chr10	-	4773	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	-256	733	-256	6	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATAGTGTGTGGTGCTT	9165	False	NA	1	True	AATAAA	-20	NA	80397650	80377491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.60	chr10	-	4584	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	102.863119866021	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAGATTTCATAGTGT	9431	False	NA	-8	True	AATAAA	-11	NA	80397384	80377500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379332_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.61	chr10	-	3901	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	9	1340	9	8	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAAGCTCCAGCTGCA	9430	False	NA	-7	True	AATAAA	-21	NA	80397385	80378098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.62	chr10	-	3973	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	2	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGCGTCTCCCAAGCTCCA	9435	False	NA	-13	True	AATAAA	-15	NA	80397380	80378104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.63	chr10	-	4792	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	-7	1	intron_retention	FALSE	canonical	3	335	junction_10	33.1984772073794	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCGTCTCCCAAGCTCC	9414	False	NA	-14	True	AATAAA	-14	NA	80397401	80378105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.64	chr10	-	3916	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	11	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCGTCTCCCAAGCTCC	9432	False	NA	-14	True	AATAAA	-14	NA	80397383	80378105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.65	chr10	-	3974	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	1	intron_retention	FALSE	canonical	3	315	junction_12	36.5004660746769	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCGTCTCCCAAGCTCC	9433	False	NA	-14	True	AATAAA	-14	NA	80397382	80378105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.66	chr10	-	4687	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	0	intron_retention	FALSE	canonical	3	335	junction_11	31.9479976870698	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGCGTCTCCCAAGCTC	9435	False	NA	-15	True	AATAAA	-13	NA	80397380	80378106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.67	chr10	-	3911	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	101.704177868554	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGCGTCTCCCAAGCTC	9433	False	NA	-15	True	AATAAA	-13	NA	80397382	80378106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.69	chr10	-	5460	1	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	13	-8761	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTTCAGACACACCAGA	9434	False	NA	NA	False	NA	NA	NA	80397381	80391921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80391900_80397400
ES.3333.7	chr10	-	5627	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	14	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	103.307175205692	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9435	False	NA	-1	True	AATAAA	-18	NA	80397380	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80383426_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.3333.8	chr10	-	5402	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	-5	4	intron_retention	FALSE	canonical	3	335	junction_10	33.1984772073794	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9416	False	NA	-1	True	AATAAA	-18	NA	80397399	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
ES.3333.9	chr10	-	4530	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	9	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATAGTGTGTGGTGC	9430	False	NA	-1	True	AATAAA	-18	NA	80397385	80377493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ES.33330.1	chr8	+	5379	1	Antisense	novelGene_ENSMUSG00000031681.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTTCCATGTTCTTC	NA	False	NA	NA	False	AAGAAA	-42	NA	80072052	80077431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_80072100_80077400
ES.33331.1	chr8	-	3119	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	-20	0	-20	0	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTTTTTCTTTG	NA	False	NA	15	True	AATAAA	-33	NA	80126167	80065023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
ES.33331.2	chr8	-	2794	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	92	213	92	-213	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAAGGTTGTTTTTTT	NA	False	NA	47	True	ATTAAA	-20	NA	80126055	80065236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
ES.33331.3	chr8	-	2141	6	NIC	ENSMUSG00000031681.17	novel	3099	7	NA	NA	108	-269	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	49.6491691773387	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGTAACTCTGTTCA	NA	False	NA	-9	True	AATAAA	-10	NA	80126039	80065292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80125881
ES.33331.4	chr8	-	3145	1	Intergenic	novelGene_27142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTCTGTTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	80125230	80122085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80122100_80125200
ES.33332.1	chr8	+	288	1	Intergenic	novelGene_27143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTACCTATAAATATGT	NA	False	NA	NA	False	AATGAA	-6	NA	80334431	80334719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80334400_80334700
ES.33332.2	chr8	+	176	1	Intergenic	novelGene_27144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGC	NA	False	NA	NA	False	NA	NA	NA	80334432	80334608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80334400_80334600
ES.33333.1	chr8	-	160	1	Intergenic	novelGene_27145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	80336190	80336030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80336000_80336200
ES.33334.1	chr8	+	171	1	Intergenic	novelGene_27147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTTA	NA	False	NA	NA	False	NA	NA	NA	80359180	80359351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80359200_80359400
ES.33335.1	chr8	-	4243	2	Intergenic	novelGene_27146	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	80362273	80357987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80361397_80361439
ES.33336.1	chr8	+	223	1	Intergenic	novelGene_27148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTATTCTATTACTAATA	NA	False	NA	NA	False	NA	NA	NA	80363705	80363928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80363700_80363900
ES.33337.1	chr8	+	7679	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-378	-88	-292	36	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTATGTTTCATGC	NA	False	NA	13	True	AGTAAA	-19	NA	80365954	80404389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.10	chr8	+	7456	19	NIC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-236	24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	69.0549298264312	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACATGGTTTCCATG	NA	False	NA	1	True	AGTAAA	-7	NA	80366010	80404377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.12	chr8	+	7495	21	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-236	31	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	64.8731647139247	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCCATGTATGTTT	NA	False	NA	8	True	AGTAAA	-14	NA	80366010	80404384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.13	chr8	+	9108	20	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-236	-5	intron_retention	FALSE	canonical	3	207	junction_13	26.6662973196952	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCTTGGGATTCTTT	NA	False	NA	12	True	ATTAAA	-12	NA	80366010	80404296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.14	chr8	+	3469	14	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-236	325	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	88.5302742989968	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTAGAAGTCGTGTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	80366010	80395443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386264_80386668_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065
ES.33337.17	chr8	+	7314	19	NIC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-235	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	69.0557119869507	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCTTGGGATTCTTT	NA	False	NA	12	True	ATTAAA	-12	NA	80366011	80404296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.18	chr8	+	3941	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-235	3648	-235	2698	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCCCTTTACCCCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	80366011	80400705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.2	chr8	+	4182	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-292	3464	-292	2882	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACAGTGTTTGATTATT	NA	False	NA	NA	False	AGTAAA	-44	NA	80365954	80400889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.20	chr8	+	7604	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-234	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	63.6641775255127	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACATGGTTTCCATG	NA	False	NA	1	True	AGTAAA	-7	NA	80366012	80404377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399404
ES.33337.24	chr8	+	4237	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-317	3293	-231	3001	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATAACATTGCACCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	80366015	80401008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.25	chr8	+	4241	22	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-231	2881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	76.3911642621335	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGACAGTGTTTGATTAT	NA	False	NA	NA	False	AGTAAA	-43	NA	80366015	80400888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80386740_80386865_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.26	chr8	+	8110	20	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-231	28	intron_retention	FALSE	non_canonical	0	0	junction_10	83.8682187502721	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTTCCATGTATG	NA	False	NA	5	True	AGTAAA	-11	NA	80366015	80404381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390346_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.28	chr8	+	7505	22	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-225	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.7941096396187	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80366021	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366298_80366398_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.29	chr8	+	7558	21	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-199	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.3941827271034	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80366047	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378322_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.30	chr8	+	7037	22	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-170	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.7941096396187	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCTTGGGATTCTTTG	NA	False	NA	13	True	ATTAAA	-13	NA	80366076	80404297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366235_80366662_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.31	chr8	+	8084	20	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-166	-3	intron_retention	FALSE	canonical	3	98	junction_9	42.3283563429118	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGGGATTCTTTGG	NA	False	NA	14	True	ATTAAA	-14	NA	80366080	80404298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.32	chr8	+	7458	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-166	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.5434779364049	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGGGATTCTTTGG	NA	False	NA	14	True	ATTAAA	-14	NA	80366080	80404298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372933_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.35	chr8	+	5225	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-243	2231	-157	-2231	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTCACTTGAATTTGA	NA	False	NA	NA	False	AATAGA	-42	NA	80366089	80402070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.36	chr8	+	4138	7	ISM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-157	18868	-157	-364	5prime_fragment	FALSE	canonical	3	220	junction_1	19.1608686882638	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATTACATGCAAATATT	NA	False	NA	NA	False	NA	NA	NA	80366089	80385485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288
ES.33337.38	chr8	+	7372	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-154	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	78.8377447673384	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCTTGGGATTCTTTG	NA	False	NA	13	True	ATTAAA	-13	NA	80366092	80404297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390556_80390741_80391683_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.4	chr8	+	7755	22	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-253	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	86.5021987320989	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80365993	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80386740_80386865_80387666_80387765_80390353_80390455_80390556_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.40	chr8	+	7569	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-153	22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	82.4356718902685	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGACATGGTTTCCA	NA	False	NA	-1	True	AGTAAA	-5	NA	80366093	80404375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390349_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396516_80396808_80397674_80397716_80399396
ES.33337.41	chr8	+	3920	21	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-153	2885	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	64.8731647139247	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGTTTGATTATTTTC	NA	False	NA	NA	False	TATAAA	-20	NA	80366093	80400892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.42	chr8	+	6859	13	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-152	24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	75.3662815116209	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACATGGTTTCCATG	NA	False	NA	1	True	AGTAAA	-7	NA	80366094	80404377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.43	chr8	+	7500	22	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-152	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.6174636037705	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCTTGGGATTCTTT	NA	False	NA	12	True	ATTAAA	-12	NA	80366094	80404296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377458_80377516_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395905_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.44	chr8	+	4867	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	-238	2584	-152	-2584	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCAGTGCTGTGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	80366094	80401717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.46	chr8	+	7644	22	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-141	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.8583415268172	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTTTCCATGTATGT	NA	False	NA	6	True	AGTAAA	-12	NA	80366105	80404382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366690_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80386740_80386865_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.47	chr8	+	7543	22	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-131	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.0733790453858	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGTCGAGTCTGCT	NA	False	NA	1	True	ATTAAA	-1	NA	80366115	80404285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382052_80382179_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.48	chr8	+	7637	22	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-122	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.8391364772939	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTTCCATGTATG	NA	False	NA	5	True	AGTAAA	-11	NA	80366124	80404381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80383857_80383991_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.49	chr8	+	7529	22	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-120	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.017079160028	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCTTGGGATTCTTTG	NA	False	NA	13	True	ATTAAA	-13	NA	80366126	80404297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80376885_80377003_80377634_80377676_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.51	chr8	+	7273	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	65.2207597318523	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTTGGGATTCTTTGG	NA	False	NA	14	True	ATTAAA	-14	NA	80366279	80404298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395058_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.52	chr8	+	6720	21	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-32	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	63.6641775255127	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80366300	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397710_80399997
ES.33337.54	chr8	+	6989	17	NIC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	71.9836949853923	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80366303	80404301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.57	chr8	+	7268	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-20	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	66.0072723266156	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACATGGTTTCCATG	NA	False	NA	1	True	AGTAAA	-7	NA	80366312	80404377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385856_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.58	chr8	+	4431	6	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	83	-364	intron_retention	FALSE	canonical	3	220	junction_1	18.8531164532551	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATTACATGCAAATATT	NA	False	NA	NA	False	NA	NA	NA	80366415	80385485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80378374_80379991_80380074_80382288
ES.33337.59	chr8	+	7084	21	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	208	30	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_12	61.3653811199768	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80366540	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390556_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.6	chr8	+	7524	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	-241	71	-241	-19	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTGTTTGTCGAGTCT	NA	False	NA	-2	True	NA	NA	NA	80366005	80404282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.60	chr8	+	6854	19	ISM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	6679	-30	-5033	30	3prime_fragment	FALSE	canonical	3	98	junction_8	42.5640040931824	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80372925	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.61	chr8	+	6876	20	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-5029	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.3354533433011	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80372929	80404301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80372978_80377634_80377682_80378300_80378374_80379353_80379462_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.62	chr8	+	9224	1	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-1697	-364	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATTACATGCAAATATT	NA	False	NA	NA	False	NA	NA	NA	80376261	80385485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80376300_80385500
ES.33337.64	chr8	+	6307	15	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	4020	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.1986193564997	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGTGTGATGCTGCAT	NA	False	NA	-48	True	TATAAA	-15	NA	80382390	80404236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80382422_80385537_80385593_80385856_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.65	chr8	+	6037	9	ISM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	24209	-80	2829	28	3prime_fragment	FALSE	canonical	3	207	junction_2	33.7481480973401	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTTCCATGTATG	NA	False	NA	5	True	AGTAAA	-11	NA	80390541	80404381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.66	chr8	+	5840	8	ISM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	25275	-80	-1844	28	3prime_fragment	FALSE	canonical	3	207	junction_1	35.4377868199169	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGGTTTCCATGTATG	NA	False	NA	5	True	AGTAAA	-11	NA	80391607	80404381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.67	chr8	+	5556	6	ISM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	27895	-83	776	31	3prime_fragment	FALSE	canonical	3	212	junction_2	33.1578045111554	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTCCATGTATGTTT	NA	False	NA	8	True	AGTAAA	-14	NA	80394227	80404384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.68	chr8	+	4942	2	ISM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	31340	6	4221	-6	3prime_fragment	FALSE	canonical	3	309	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTCTGCTTGGGATTCTT	NA	False	NA	11	True	ATTAAA	-11	NA	80397672	80404295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_80397716_80399396
ES.33337.69	chr8	+	6119	1	Genic_Genomic	ENSMUSG00000036990.14	novel	NA	NA	NA	NA	4813	30	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGTTTCCATGTATGTT	NA	False	NA	7	True	AGTAAA	-13	NA	80398264	80404383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_80398300_80404400
ES.33337.70	chr8	+	3869	2	NNC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	6987	43294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAACTTGACAATGAATC	NA	False	NA	NA	False	NA	NA	NA	80400438	80447647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80404294_80447633
ES.33337.71	chr8	+	157	1	Intergenic	novelGene_27149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	80426841	80426998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80426800_80427000
ES.33337.72	chr8	+	3219	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-84	382	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATCGTTTCTAAATTT	NA	False	NA	NA	False	NA	NA	NA	80438364	80504331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.73	chr8	+	908	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-54	79	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTATGTGTTTACTTTAT	NA	False	NA	30	True	ATTAAA	-36	NA	80438394	80502050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.74	chr8	+	1017	6	NNC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-46	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.763411819397	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAAGTCAATCTTTAA	NA	False	NA	8	True	AATAAA	-26	NA	80438402	80501977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80456699_80456842_80501560
ES.33337.75	chr8	+	3201	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-18	-382	-18	382	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATCGTTTCTAAATTT	NA	False	NA	NA	False	NA	NA	NA	80438430	80504331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.76	chr8	+	899	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	-14	1916	-14	62	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTCAAGATATATATA	NA	False	NA	13	True	ATTAAA	-19	NA	80438434	80502033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.77	chr8	+	2969	1	Genic_Genomic	ENSMUSG00000036977.9	novel	NA	NA	NA	NA	-8	-60562	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATAACAAAATATACTAA	NA	False	NA	NA	False	NA	NA	NA	80438440	80441409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_80438400_80441400
ES.33337.78	chr8	+	807	6	NNC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	219.170800974947	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAACATGAATTTGAAGTC	NA	False	NA	-1	True	AATAAA	-17	NA	80438445	80501968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80459409_80459442_80501560
ES.33337.79	chr8	+	5184	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-15	-578	-15	578	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCTATTTCTGTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	80438464	80506266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.8	chr8	+	7648	22	NNC	ENSMUSG00000036990.14	novel	7213	21	NA	NA	-238	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	79.8257740019559	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTCTGCTTGGGATTCTT	NA	False	NA	11	True	ATTAAA	-11	NA	80366008	80404295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80366694_80370382_80370467_80372926_80372978_80376885_80377003_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ES.33337.80	chr8	+	948	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-12	3655	-12	62	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTCAAGATATATATA	NA	False	NA	13	True	ATTAAA	-19	NA	80438467	80502033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.81	chr8	+	2975	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-3	1619	-3	120	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCCATGAATTTGCT	NA	False	NA	NA	False	NA	NA	NA	80438476	80504069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.82	chr8	+	920	5	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	8	6	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAAGTCAATCTTTAA	NA	False	NA	8	True	AATAAA	-26	NA	80438487	80501977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.83	chr8	+	925	6	NNC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	234.883290167692	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438507	80501971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80499040_80499120_80501560
ES.33337.84	chr8	+	775	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	51	3765	51	-48	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCATGTCTGTTTTTTA	NA	False	NA	-46	True	GATAAA	-8	NA	80438530	80501923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ES.33337.85	chr8	+	927	6	NNC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	54	75	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	224.438855816011	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATACTATGTGTTTACT	NA	False	NA	26	True	ATTAAA	-32	NA	80438533	80502046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80459409_80459442_80501560
ES.33337.86	chr8	+	2705	1	NIC	ENSMUSG00000036977.9	novel	4591	5	NA	NA	9515	111	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATAAACTCAGAGCCAT	5053	False	NA	NA	False	NA	NA	NA	80501355	80504060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_80501400_80504100
ES.33338.1	chr8	-	4431	15	Antisense	novelGene_ENSMUSG00000036990.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAACAACACAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	80401716	80384598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_80385310_80385494_80385591_80385810_80385929_80386024_80386092_80387666_80387763_80390350_80390453_80390548_80390739_80391607_80391647_80393344_80393474_80394231_80394284_80395063_80395140_80395902_80396040_80396550_80396806_80397672_80397714_80399394
ES.33338.2	chr8	-	6971	13	Antisense	novelGene_ENSMUSG00000036990.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	80401716	80384622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_80385310_80385494_80385591_80385810_80385929_80386024_80386092_80387669_80387771_80390359_80390453_80390548_80393474_80394231_80394284_80395063_80395141_80395902_80396040_80396550_80396806_80397672_80397714_80399394
ES.33339.1	chr8	-	3556	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-4	4969	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.311849531882	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATATAGCTTGCTGCC	NA	False	NA	NA	False	AAAAAG	-5	NA	80438303	80405121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80405129_80410268_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.10	chr8	-	4938	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-7	-176	intron_retention	FALSE	canonical	3	1167	junction_9	94.8070202767179	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCGGTGTGTGGTCATTC	NA	False	NA	-3	True	AATAAA	-25	NA	80438306	80410266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.15	chr8	-	3508	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	6	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	402.830865106378	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCGGTGTGTGGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	80438273	80410269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412679_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435179_80438171
ES.33339.17	chr8	-	3286	16	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	22	-179	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	328.636712630967	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCGGTGTGTGGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	80438257	80410269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80438171
ES.33339.18	chr8	-	3513	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	-179	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_15	533.88287791953	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCGGTGTGTGGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	80438298	80410269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435179_80438171
ES.33339.19	chr8	-	3490	17	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	330.439078159651	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTACCGGTGTGTGGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	80438298	80410269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80416858_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.2	chr8	-	4870	1	FSM	ENSMUSG00000094594.3	ENSMUST00000178097.3	523	1	-2877	-1470	-2877	1470	mono-exon	FALSE	NA	NA	NA	NA	NA	990	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTATATGACTGTGCAC	NA	False	NA	NA	False	AATAAA	-37	NA	80410312	80405442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80405400_80410300
ES.33339.21	chr8	-	3576	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-7	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	320.444770921719	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTACCGGTGTGTGGT	NA	False	NA	-8	True	AATAAA	-20	NA	80438306	80410271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433976_80435051_80435182_80438171
ES.33339.22	chr8	-	3648	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-15	-181	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	407.303675346316	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTACCGGTGTGTGGT	NA	False	NA	-8	True	AATAAA	-20	NA	80438314	80410271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
ES.33339.23	chr8	-	3600	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-15	-181	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	418.233572286652	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTACCGGTGTGTGGT	NA	False	NA	-8	True	AATAAA	-20	NA	80438314	80410271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80413152_80413196_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.24	chr8	-	3968	16	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	-182	intron_retention	FALSE	canonical	0	0	junction_1	459.182558708649	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTACCGGTGTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	80438298	80410272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412569_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427541_80427612_80427743_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.25	chr8	-	3515	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-1	-182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	321.276411944563	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTTACCGGTGTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	80438280	80410272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427605_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.26	chr8	-	3475	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	21	-183	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_10	317.098993417352	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438258	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426042_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.27	chr8	-	3607	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-3	-183	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	313.312285484138	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438282	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438087
ES.33339.29	chr8	-	3594	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	35	-183	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	319.735563317293	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438334	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414212_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.3	chr8	-	3761	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	55	-23	-15	23	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTTCTTTATAGATTG	NA	False	NA	NA	False	ATTAAA	-21	NA	80438314	80410067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.32	chr8	-	3466	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-4	-183	at_least_one_novel_splicesite	FALSE	canonical	2	48	junction_8	309.36542931965	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438303	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417010_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.33	chr8	-	3630	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	10	-183	intron_retention	FALSE	canonical	3	1167	junction_9	95.059767383473	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438289	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414069_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.35	chr8	-	4377	16	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	3326	183	3236	-183	3prime_fragment	FALSE	canonical	3	1167	junction_10	81.1433299785016	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80435043	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862
ES.33339.38	chr8	-	6542	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	33	-183	intron_retention	FALSE	canonical	3	1167	junction_9	95.3702488987001	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438336	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.39	chr8	-	3401	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	9	-183	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	321.850745445385	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438290	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80438171
ES.33339.4	chr8	-	3739	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	318.76701257266	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGGTTTCTTTATAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	80438298	80410070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429724_80433858_80433949_80435051_80435182_80438171
ES.33339.40	chr8	-	3559	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	412.822417954055	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438298	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435176_80437456_80437483_80438171
ES.33339.41	chr8	-	3585	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	6	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	485.891912483923	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438273	80410273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428501_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
ES.33339.43	chr8	-	3496	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	13	-184	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_8	317.008301114937	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGCTTACCGGTGTGT	NA	False	NA	-11	True	AATAAA	-17	NA	80438266	80410274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420062_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.44	chr8	-	6077	16	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-5	-184	intron_retention	FALSE	canonical	3	1173	junction_11	91.1042382231596	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGCTTACCGGTGTGT	NA	False	NA	-11	True	AATAAA	-17	NA	80438304	80410274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.45	chr8	-	3399	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-3	-184	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	329.507865753991	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGCTTACCGGTGTGT	NA	False	NA	-11	True	AATAAA	-17	NA	80438282	80410274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.46	chr8	-	3534	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-31	-184	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	319.484738712033	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGCTTACCGGTGTGT	NA	False	NA	-11	True	AATAAA	-17	NA	80438330	80410274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417052_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.48	chr8	-	3441	17	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-185	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	329.69227484694	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGCTTACCGGTGTG	NA	False	NA	-12	True	AATAAA	-16	NA	80438299	80410275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.49	chr8	-	3647	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	1	-185	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	483.999901158035	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGCTTACCGGTGTG	NA	False	NA	-12	True	AATAAA	-16	NA	80438298	80410275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414212_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
ES.33339.50	chr8	-	3420	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-30	-185	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_7	317.058921750503	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGCTTACCGGTGTG	NA	False	NA	-12	True	AATAAA	-16	NA	80438329	80410275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80417013_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.51	chr8	-	2930	13	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-1798	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	367.316271155466	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTCTGAGCTTACCGG	NA	False	NA	-16	True	AATAAA	-12	NA	80427840	80410279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411900_80412569_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743
ES.33339.52	chr8	-	3545	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	58	190	-12	-190	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTCTGAGCTTACCG	NA	False	NA	-17	True	AATAAA	-11	NA	80438311	80410280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.54	chr8	-	2313	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	55	1425	-15	1319	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGTGTACCAGTATAAC	NA	False	NA	NA	False	GATAAA	-19	NA	80438314	80411515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.56	chr8	-	2166	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	55	1572	-15	1172	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGAGACATTTCAGAT	NA	False	NA	-8	True	ATTAAA	-20	NA	80438314	80411662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.57	chr8	-	2027	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	78	1688	8	1056	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGAGCTTGAAGTATG	NA	False	NA	NA	False	TATAAA	-29	NA	80438291	80411778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.58	chr8	-	3094	16	FSM	ENSMUSG00000058355.9	ENSMUST00000211509.2	3030	16	-31	-33	-31	33	multi-exon	FALSE	canonical	3	1167	junction_8	95.1564793146297	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGAATGGAAGATGATG	NA	False	NA	NA	False	NA	NA	NA	80438330	80412801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.59	chr8	-	2956	15	NIC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	10	33	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	350.630168847637	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGAATGGAAGATGATG	NA	False	NA	NA	False	NA	NA	NA	80438289	80412801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.6	chr8	-	3684	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	20	89	20	-89	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTTCATCCACCTTAA	NA	False	NA	84	True	AATATA	-29	NA	80438349	80410179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.60	chr8	-	3146	17	NNC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	8	33	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	428.507858008462	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGAATGGAAGATGATG	NA	False	NA	NA	False	NA	NA	NA	80438291	80412801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
ES.33339.61	chr8	-	3041	16	NNC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	-8	33	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_6	335.585193687419	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGAATGGAAGATGATG	NA	False	NA	NA	False	NA	NA	NA	80438287	80412801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420062_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.62	chr8	-	5186	2	NIC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	6932	29	intron_retention	FALSE	canonical	3	1247	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80419110	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80414635_80415753
ES.33339.63	chr8	-	5351	2	NNC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	7009	29	intron_retention	FALSE	canonical	0	0	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80419033	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80416367_80417243
ES.33339.64	chr8	-	3077	16	NNC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	1	29	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	338.62987989183	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80438298	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80414212_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.65	chr8	-	6016	16	NNC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	79	29	intron_retention	FALSE	canonical	3	9	junction_13	439.290974184538	1064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80438200	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
ES.33339.66	chr8	-	4350	13	NIC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	-4	29	intron_retention	FALSE	canonical	3	1167	junction_5	99.4962310843984	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80438283	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.67	chr8	-	6107	14	NIC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	-3	29	intron_retention	FALSE	canonical	3	1167	junction_6	100.699564879218	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTTTGAATGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	80438282	80412805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.68	chr8	-	6067	12	NIC	ENSMUSG00000058355.9	novel	3030	16	NA	NA	5399	1	intron_retention	FALSE	canonical	3	1167	junction_8	82.2007218805647	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80432880	80412833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427612_80427743_80427882_80428402_80428521_80429632
ES.33339.69	chr8	-	3858	1	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	9336	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1062	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	80416706	80412848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80412800_80416700
ES.33339.7	chr8	-	5303	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-15	-173	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_15	305.477458265991	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGTGGTCATTCTTT	NA	False	NA	0	True	AATAAA	-28	NA	80438314	80410263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80433949_80435051_80435182_80438171
ES.33339.70	chr8	-	710	7	ISM	ENSMUSG00000058355.9	ENSMUST00000211509.2	3030	16	14	14751	-6	7115	5prime_fragment	FALSE	canonical	3	1173	junction_2	119.498140385345	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATGAAACAAAGACAC	NA	False	NA	1	True	NA	NA	NA	80438285	80427585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ES.33339.71	chr8	-	2718	1	NIC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	-15	-896	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGGTATATATAGTT	NA	False	NA	NA	False	NA	NA	NA	80438314	80435596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80435600_80438300
ES.33339.8	chr8	-	4047	17	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-174	intron_retention	FALSE	canonical	3	121	junction_16	294.542912567507	1111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGTGTGTGGTCATTCTT	NA	False	NA	-1	True	AATAAA	-27	NA	80438279	80410264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80428521_80429632_80429731_80433862_80433949_80435051_80435179_80438171
ES.3334.1	chr10	-	114	2	NNC	ENSMUSG00000035397.9	novel	2674	2	NA	NA	-39	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTCTGTCTGATTG	8667	False	NA	-2	True	ATTAAA	-22	NA	80413194	80402953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80403021_80413147
ES.3334.2	chr10	-	3094	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	-416	-4	-416	4	multi-exon	FALSE	canonical	3	135	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTCTGTCTGATTG	8290	False	NA	-2	True	ATTAAA	-22	NA	80413571	80402953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80405057_80412580
ES.3334.3	chr10	-	2571	3	NNC	ENSMUSG00000035397.9	novel	2674	2	NA	NA	-119	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.5	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTCTGTCTGTCTGATT	8587	False	NA	-3	True	ATTAAA	-21	NA	80413274	80402954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80403682_80403906_80405057_80412580
ES.3334.4	chr10	-	3044	1	NIC	ENSMUSG00000035397.9	novel	2674	2	NA	NA	7149	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGCCCTTCTGTCT	6708	False	NA	-11	True	ATTAAA	-13	NA	80406006	80402962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80403000_80406000
ES.33340.1	chr8	-	2533	1	Genic_Genomic	ENSMUSG00000110202.2	novel	NA	NA	NA	NA	-113	-2727	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCCCTTACAGGCAACT	NA	False	NA	NA	False	NA	NA	NA	80479155	80476622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_80476600_80479200
ES.33340.2	chr8	-	150	1	Intergenic	novelGene_27150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	80477964	80477814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80477800_80478000
ES.33341.1	chr8	-	179	1	Intergenic	novelGene_27151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80509937	80509758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80509800_80509900
ES.33342.1	chr8	+	3454	1	Intergenic	novelGene_27152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-25	NA	80606246	80609700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_80606200_80609700
ES.33343.1	chr8	-	9102	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	-25	-3	-25	1	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTGCCCTTTTAAAA	4281	False	NA	1	True	ATTAAA	-20	NA	80784660	80692478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ES.33343.2	chr8	-	3117	14	NIC	ENSMUSG00000064325.5	novel	9074	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	3.68910117177901	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTGCCCTTTTAAA	4296	False	NA	0	True	ATTAAA	-19	NA	80784645	80692479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_80693058_80699026_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ES.33343.3	chr8	-	3384	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	442	5248	442	-5248	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCAGATTTTCTTAA	4748	False	NA	NA	False	AATAAA	-14	NA	80784193	80697729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ES.33343.4	chr8	-	2553	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	491	6030	491	-6030	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGAGCATGTTTCCA	4797	False	NA	NA	False	ATTAAA	-8	NA	80784144	80698511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ES.33343.5	chr8	-	1457	4	ISM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	-22	77980	-22	-77980	5prime_fragment	FALSE	canonical	2	10	junction_2	1.24721912892465	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGGAGATAATCTAAG	4284	False	NA	NA	False	AATAAA	-22	NA	80784657	80770461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_80770777_80771679_80771837_80778056_80778250_80783865
ES.33343.6	chr8	-	1858	1	Genic_Genomic	ENSMUSG00000064325.5	novel	NA	NA	NA	NA	-127	-90423	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAAGCTGAATCTAATT	4179	False	NA	NA	False	NA	NA	NA	80784762	80782904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_80782900_80784800
ES.33344.1	chr8	-	180	1	Intergenic	novelGene_27153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAGAAAATGGTGA	NA	False	NA	NA	False	NA	NA	NA	80817495	80817315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_80817300_80817500
ES.33345.1	chr8	+	175	1	Intergenic	novelGene_27154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	81169103	81169278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81169100_81169300
ES.33346.1	chr8	+	937	4	NNC	ENSMUSG00000042353.10	novel	6384	8	NA	NA	69722	195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTTTTGTGTTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	81407430	81422180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_81407541_81413492_81413745_81417300_81417451_81421755
ES.33347.1	chr8	-	7670	25	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	123	1805	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	322.881127076548	1620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAAGTTTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	81465931	81423330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81424557_81424609_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.10	chr8	-	4509	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	90	-1436	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	329.04061148673	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	-1	True	AATAAA	-41	NA	81465964	81426571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427752_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.12	chr8	-	4495	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-21	-1436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	328.236238638252	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	-1	True	AATAAA	-41	NA	81466147	81426571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465754
ES.33347.14	chr8	-	2468	8	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	248	-1439	intron_retention	FALSE	canonical	3	1409	junction_6	111.388637532868	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTTTCTTTCCA	NA	False	NA	-4	True	AATAAA	-38	NA	81437242	81426574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435856_81436284_81436396_81437185
ES.33347.15	chr8	-	4483	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	114	-1439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	329.823261373286	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTTTCTTTCCA	NA	False	NA	-4	True	AATAAA	-38	NA	81465940	81426574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428856_81431229_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.19	chr8	-	4477	23	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	15	-1441	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	336.479946107092	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGGTCTTTTCTTTC	NA	False	NA	-6	True	AATAAA	-36	NA	81466111	81426576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.2	chr8	-	6180	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-56	-11	-56	11	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAATAATTAAATGATG	NA	False	NA	NA	False	AATAAA	-26	NA	81466182	81425124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.21	chr8	-	5396	23	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	87	-1441	intron_retention	FALSE	canonical	3	1231	junction_14	131.511901230608	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGGTCTTTTCTTTC	NA	False	NA	-6	True	AATAAA	-36	NA	81465967	81426576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.25	chr8	-	4278	16	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	290	-1441	intron_retention	FALSE	canonical	3	1231	junction_14	130.323426733475	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGGTCTTTTCTTTC	NA	False	NA	-6	True	AATAAA	-36	NA	81452731	81426576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618
ES.33347.28	chr8	-	4123	25	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	415	-1441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	322.881127076548	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTGGTCTTTTCTTTC	NA	False	NA	-6	True	AATAAA	-36	NA	81465639	81426576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427198_81427259_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.3	chr8	-	4644	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-29	-1435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	329.792814608062	1619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTCTTTCCATTTC	NA	False	NA	0	True	AATAAA	-42	NA	81466155	81426570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456794_81460350_81460486_81463317_81463393_81465551
ES.33347.30	chr8	-	4568	23	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	138	-1444	intron_retention	FALSE	canonical	3	1231	junction_14	120.555806493668	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTAAAGTGGTCTTTTCT	NA	False	NA	-9	True	AATAAA	-33	NA	81465916	81426579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.31	chr8	-	4144	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	246	1723	174	-1723	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGAGTTTTTAGAGT	NA	False	NA	NA	False	AATAGA	-22	NA	81465880	81426858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.32	chr8	-	3909	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	15	2189	15	-2189	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTTGTGTAATTAATT	NA	False	NA	NA	False	AGTAAA	-36	NA	81466111	81427324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.33	chr8	-	3604	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	132	-2300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	436.629044493463	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGTGAGGATTGTG	NA	False	NA	11	True	AATAAA	-29	NA	81465922	81427435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447425_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455196_81456719_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.34	chr8	-	3894	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-85	2304	-85	-2304	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTCATTTGTGAGGAT	NA	False	NA	7	True	AATAAA	-25	NA	81466211	81427439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.35	chr8	-	3435	25	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-35	-2319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	322.881127076548	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTATTTTTCTAATAGT	NA	False	NA	-8	True	AATAAA	-32	NA	81466089	81427454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551_81465708_81466029
ES.33347.38	chr8	-	3593	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	114	-2328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	329.808359316795	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATTTGATTTATTTT	NA	False	NA	-17	True	AATAAA	-23	NA	81465940	81427463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454419_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.4	chr8	-	4740	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	-62	1435	-62	-1435	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTCTTTCCATTTC	NA	False	NA	0	True	AATAAA	-42	NA	81466188	81426570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.40	chr8	-	3793	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-17	-2328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	329.652466367583	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATTTGATTTATTTT	NA	False	NA	-17	True	AATAAA	-23	NA	81466143	81427463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443222_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.42	chr8	-	3687	23	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	19	-2328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	327.483328703176	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATTTGATTTATTTT	NA	False	NA	-17	True	AATAAA	-23	NA	81466107	81427463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431458_81432046_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.44	chr8	-	3294	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	409	-2328	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	329.822069233545	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATTTGATTTATTTT	NA	False	NA	-17	True	AATAAA	-23	NA	81465645	81427463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447326_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.47	chr8	-	3617	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	90	-2328	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	329.04061148673	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATTTGATTTATTTT	NA	False	NA	-17	True	AATAAA	-23	NA	81465964	81427463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427752_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.48	chr8	-	3530	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	174	-2334	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	329.822069233545	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCATTTGATT	NA	False	NA	-23	True	AATAAA	-17	NA	81465880	81427469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446427_81447312_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.5	chr8	-	4457	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	145	-1436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	329.822069233545	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	-1	True	AATAAA	-41	NA	81465909	81426571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446427_81447312_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.52	chr8	-	5426	22	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	144	-2334	intron_retention	FALSE	canonical	3	1231	junction_13	128.199108178912	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCATTTGATT	NA	False	NA	-23	True	AATAAA	-17	NA	81465910	81427469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.54	chr8	-	3885	23	NIC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	129	-2334	intron_retention	FALSE	canonical	3	1231	junction_14	121.413821765491	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCATTTGATT	NA	False	NA	-23	True	AATAAA	-17	NA	81465925	81427469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.57	chr8	-	3396	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-21	-2334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	328.236238638252	1612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCATTTGATT	NA	False	NA	-23	True	AATAAA	-17	NA	81466147	81427469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465955
ES.33347.59	chr8	-	3281	23	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	152	3679	80	3299	5prime_fragment	FALSE	canonical	3	1231	junction_14	132.011331845176	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGGAACTAGAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	81465974	81428814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.60	chr8	-	1082	7	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	207	27770	135	-695	5prime_fragment	FALSE	canonical	3	1273	junction_6	99.4491774168539	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTCAACTGGAGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	81465919	81452905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33347.7	chr8	-	5709	23	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	-35	-1436	intron_retention	FALSE	canonical	0	0	junction_12	332.339080552995	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	-1	True	AATAAA	-41	NA	81466161	81426571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81438435_81440562_81440696_81443077_81443231_81444150_81444290_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ES.33348.1	chr8	+	6250	2	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	2425	False	NA	NA	False	NA	NA	NA	81501090	81507600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81501303_81501562
ES.33349.1	chr8	+	7267	3	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCCCTGCGCTCCGCCC	NA	False	NA	NA	False	NA	NA	NA	81511676	81606565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81518246_81526731_81527024_81606159
ES.33349.2	chr8	+	11135	1	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACACAAAATAAATCATG	NA	False	NA	NA	False	NA	NA	NA	81511676	81522811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81511700_81522800
ES.33349.3	chr8	+	8841	2	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACACAAAATAAATCATG	NA	False	NA	NA	False	NA	NA	NA	81511676	81522811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81515724_81518017
ES.33349.4	chr8	+	244	1	Intergenic	novelGene_27156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAAACCCTTGGATTTC	NA	False	NA	NA	False	AATAAA	-25	NA	81536684	81536928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81536700_81536900
ES.33349.5	chr8	+	511	1	Intergenic	novelGene_27157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81585946	81586457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81585900_81586500
ES.33349.6	chr8	+	5705	2	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	81592321	81598675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81593691_81594339
ES.33349.7	chr8	+	4720	2	Antisense	novelGene_ENSMUSG00000031714.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81595517	81600281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81598679_81598722
ES.3335.1	chr10	+	3669	1	Intergenic	novelGene_2579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACATAAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	80415328	80418997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80415300_80419000
ES.33350.1	chr8	-	4045	2	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	64596	2342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAAACACAGATGGGCTG	NA	False	NA	NA	False	NA	NA	NA	81492917	81488724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81488891_81489038
ES.33350.10	chr8	-	4054	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	19404	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	143.178210632764	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81587721	81491062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81587578
ES.33350.12	chr8	-	4041	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21253	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	179.116749635538	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585872	81491062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81517512_81517594_81518017_81518244_81526729_81527025_81585823
ES.33350.13	chr8	-	4070	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21254	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.46946815545	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTGTTACTTTTTT	NA	False	NA	-4	True	AATAAA	-20	NA	81585871	81491063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81562841_81562954_81585823
ES.33350.14	chr8	-	4954	11	FSM	ENSMUSG00000031714.10	ENSMUST00000210676.2	4985	11	33	-2	10	2	multi-exon	FALSE	canonical	3	20	junction_4	194.66638127833	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTGTTACTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	81607115	81491064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ES.33350.15	chr8	-	4569	6	ISM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	93524	-4	43912	2	3prime_fragment	FALSE	canonical	3	401	junction_5	36.2436201282377	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTGTTACTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	81513601	81491064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729
ES.33350.16	chr8	-	4016	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21254	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	176.140966274175	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTGTTACTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	81585871	81491064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81531441_81531501_81585823
ES.33350.17	chr8	-	4388	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	174.659783579392	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCTGTGTTACTTT	NA	False	NA	-7	True	AATAAA	-17	NA	81607147	81491066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160_81606365_81606870
ES.33350.18	chr8	-	4048	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21256	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	178.489327412033	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGTGAGCTGTGTTA	NA	False	NA	-11	True	AATAAA	-13	NA	81585869	81491070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81542282_81542382_81585823
ES.33350.22	chr8	-	4111	4	ISM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	103742	5	54130	-5	3prime_fragment	FALSE	canonical	3	423	junction_1	32.9983164553722	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTGAGCTGTG	NA	False	NA	-14	True	AATAAA	-10	NA	81503383	81491073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562
ES.33350.23	chr8	-	3944	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21249	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	138.78556156447	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTGAGCTGTG	NA	False	NA	-14	True	AATAAA	-10	NA	81585876	81491073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501294_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.24	chr8	-	4558	5	ISM	ENSMUSG00000031714.10	ENSMUST00000210676.2	4985	11	102185	7	52550	-5	3prime_fragment	FALSE	canonical	3	20	junction_4	192.514122858558	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTGAGCTGTG	NA	False	NA	-14	True	AATAAA	-10	NA	81504963	81491073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789
ES.33350.25	chr8	-	4091	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21235	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.46946815545	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTGAGCTGTG	NA	False	NA	-14	True	AATAAA	-10	NA	81585890	81491073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81570825_81570950_81585823
ES.33350.26	chr8	-	3283	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21236	-688	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTACTCACTGCCCC	NA	False	NA	NA	False	AGTAAA	-22	NA	81585889	81491756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.27	chr8	-	3344	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21256	-697	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTACTGTGATTTGTACT	NA	False	NA	NA	False	AGTAAA	-13	NA	81585869	81491765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.28	chr8	-	2977	1	Intergenic	novelGene_27155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATGGAGTCTGGCTTA	NA	False	NA	NA	False	TTTAAA	-28	NA	81526434	81523457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_81523500_81526400
ES.33350.3	chr8	-	4239	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	20977	7	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81586148	81491059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.4	chr8	-	5020	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	-141	-9	-118	7	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81607266	81491059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ES.33350.5	chr8	-	4066	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21237	7	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	172.619350016155	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTACTTTTTTCTTA	NA	False	NA	0	True	AATAAA	-24	NA	81585888	81491059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81561848_81561936_81585823
ES.33350.6	chr8	-	4085	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21220	6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTACTTTTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	81585905	81491060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.7	chr8	-	8737	9	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21252	4	intron_retention	FALSE	canonical	3	380	junction_5	39.585350825779	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585873	81491062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.8	chr8	-	3956	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21253	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	144.55175501025	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585872	81491062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511733_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
ES.33350.9	chr8	-	4171	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21250	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	178.097276789961	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTACTTTTTTC	NA	False	NA	-3	True	AATAAA	-21	NA	81585875	81491062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81553818_81554027_81585823
ES.33351.1	chr8	-	178	1	Intergenic	novelGene_27158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAGTCTCTAGAGTT	NA	False	NA	NA	False	NA	NA	NA	81645304	81645126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_81645100_81645300
ES.33352.1	chr8	+	1573	5	Intergenic	novelGene_27159	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.69258240356725	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATTAATTGAGACAC	1244	False	NA	NA	False	AATAAA	-13	NA	81668433	81695272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668460_81668661_81668823_81677185_81677329_81693166_81693385_81694247
ES.33352.2	chr8	+	995	6	Intergenic	novelGene_27160	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	5.8172158288996	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACAACTCAATTTGCT	1263	False	NA	NA	False	AATAAA	-15	NA	81668452	81696388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81675725_81675785_81677185_81677329_81694247_81694544_81696122
ES.33352.3	chr8	+	1462	4	Intergenic	novelGene_27161	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	6.54896090146283	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGTCTATTTTTTCT	1274	False	NA	NA	False	NA	NA	NA	81668463	81681690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81680591
ES.33352.4	chr8	+	1969	6	Intergenic	novelGene_27162	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	5.19230199429887	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGGGTGGTCTAGTTTG	1275	False	NA	NA	False	AATAAA	-14	NA	81668464	81697215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81693166_81693385_81694247_81694544_81696122
ES.33352.5	chr8	+	4928	5	Antisense	novelGene_ENSMUSG00000038250.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	6.36396103067893	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGTCCTGTTCAATG	1275	False	NA	NA	False	AATAAA	-26	NA	81668464	81711317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_81668523_81668661_81668823_81677156_81677329_81705902_81705965_81706842
ES.33352.6	chr8	+	2471	4	Intergenic	novelGene_27163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_3	4.49691252107735	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATTGAGACACCATG	1276	False	NA	NA	False	AATAAA	-17	NA	81668465	81695276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81693166
ES.33352.7	chr8	+	1129	6	Intergenic	novelGene_27164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_5	4.93963561409139	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACAACTCAATTTGCT	1277	False	NA	NA	False	AATAAA	-15	NA	81668466	81696388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81693166_81693385_81694247_81694544_81696133
ES.33352.8	chr8	+	1058	7	Intergenic	novelGene_27165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	5.3748384988657	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACAACTCAATTTGCT	1291	False	NA	NA	False	AATAAA	-15	NA	81668480	81696388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668523_81668661_81668823_81677185_81677329_81693166_81693385_81694247_81694327_81694394_81694544_81696122
ES.33352.9	chr8	+	1210	4	Intergenic	novelGene_27166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGCAGTTACTGCAATT	1493	False	NA	NA	False	AATAAA	-14	NA	81668682	81694034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81668823_81675725_81675785_81677185_81677329_81693166
ES.33353.1	chr8	+	169	1	Intergenic	novelGene_27168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGATAG	NA	False	NA	NA	False	NA	NA	NA	81724190	81724359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_81724200_81724400
ES.33354.1	chr8	-	1680	1	Intergenic	novelGene_27167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81703703	81702023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_81702000_81703700
ES.33355.1	chr8	-	4723	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	-9	-7	-9	7	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCCTGTTTTGGTTTTC	NA	False	NA	-2	True	ATTAAA	-21	NA	81741566	81707354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.10	chr8	-	3899	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	17	791	2	-791	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAAATGGTGTATTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	81741540	81708152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.11	chr8	-	3759	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	-7	955	-7	-955	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGTGGTTGTTTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	81741564	81708316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.12	chr8	-	3589	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	23	1095	8	-1095	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTGACCCTGAGAGAA	NA	False	NA	NA	False	AATACA	-13	NA	81741534	81708456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.13	chr8	-	2092	7	ISM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	34	9137	19	8343	5prime_fragment	FALSE	canonical	3	94	junction_1	10.4628974104797	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGACTCTGCCTGGAC	NA	False	NA	NA	False	AATAAA	-17	NA	81741523	81716498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.2	chr8	-	4859	11	NNC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	25	6	intron_retention	FALSE	canonical	0	0	junction_4	43.7373981850773	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCCTGTTTTGGTTTT	NA	False	NA	-3	True	ATTAAA	-20	NA	81741517	81707355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81718232_81718419_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.3	chr8	-	3196	8	NIC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	25	-1	intron_retention	FALSE	canonical	1	1	junction_1	38.3927076409049	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCTACTGTCCTGTTT	NA	False	NA	-10	True	ATTAAA	-13	NA	81741517	81707362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81708610_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.5	chr8	-	1926	1	NIC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	32162	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTTGTATATTTGGATT	NA	False	NA	-11	True	ATTAAA	-16	NA	81709380	81707454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_81707500_81709400
ES.33355.6	chr8	-	4657	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	-44	94	-44	-94	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGTTGTATATTTGGAT	NA	False	NA	-12	True	ATTAAA	-15	NA	81741601	81707455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.7	chr8	-	4062	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	2	643	2	-643	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGAGATGGTGAGTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	81741555	81708004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.8	chr8	-	3545	11	NNC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	-9	-643	intron_retention	FALSE	non_canonical	0	0	junction_2	32.9793875018928	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGAGATGGTGAGTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	81741566	81708004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81708610_81711066_81711157_81711684_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33355.9	chr8	-	5054	11	NNC	ENSMUSG00000038250.10	novel	4707	10	NA	NA	26	-786	intron_retention	FALSE	canonical	0	0	junction_4	43.7373981850773	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGTATTTTCAGTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	81741516	81708147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81718232_81719407_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ES.33356.1	chr8	-	2701	2	Antisense	novelGene_ENSMUSG00000037940.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAAGGGTCCCATAT	NA	False	NA	NA	False	ATTAAA	-21	NA	82624842	82621457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_82623965_82624648
ES.33357.1	chr8	-	1757	1	Intergenic	novelGene_27169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCTCGGTTTTCTTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	83210092	83208335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_83208300_83210100
ES.33358.1	chr8	-	1360	1	Intergenic	novelGene_27170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTAGTTTAATGTAGT	NA	False	NA	NA	False	AATAAA	-15	NA	83473569	83472209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_83472200_83473600
ES.33359.1	chr8	-	1840	2	Antisense	novelGene_ENSMUSG00000109893.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTCATGCCTTCAATAA	NA	False	NA	NA	False	AATAAA	-24	NA	83481679	83474902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_83476566_83481502
ES.3336.1	chr10	-	1473	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	0	-5	0	5	multi-exon	TRUE	canonical	3	337	junction_4	42.7631558704453	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTCCTTTGTGGCTC	7798	False	NA	0	True	ATTAAA	-20	NA	80426175	80419482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
ES.3336.2	chr10	-	4597	4	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	19	-4	2	4	intron_retention	FALSE	canonical	3	372	junction_3	33.2565782966318	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCTCCTTTGTGGCT	7817	False	NA	-1	True	ATTAAA	-19	NA	80426156	80419483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348
ES.3336.3	chr10	-	4392	3	NIC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	2	3	intron_retention	FALSE	canonical	3	42	junction_2	181.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGGCTCCTTTGTGGC	7826	False	NA	-2	True	ATTAAA	-18	NA	80426147	80419484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80419898_80419976_80420157_80422348
ES.3336.4	chr10	-	5283	3	ISM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	41	0	15	0	intron_retention	FALSE	canonical	3	405	junction_1	24	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7839	False	NA	-5	True	ATTAAA	-15	NA	80426134	80419487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80419898_80419976_80420157_80421441
ES.3336.5	chr10	-	6642	1	NIC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	19	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGCTTGGCTCCTTTG	7843	False	NA	-6	True	ATTAAA	-14	NA	80426130	80419488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80419500_80426100
ES.3336.6	chr10	-	1502	4	FSM	ENSMUSG00000003346.15	ENSMUST00000191440.7	1529	4	27	0	18	0	multi-exon	FALSE	canonical	3	337	junction_3	48.5821183381522	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGCTTGGCTCCTTTG	7842	False	NA	-6	True	ATTAAA	-14	NA	80426131	80419488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80420157_80421441_80421637_80422348_80422865_80426008
ES.3336.7	chr10	-	5361	2	ISM	ENSMUSG00000003346.15	ENSMUST00000191440.7	1529	4	24	0	15	0	intron_retention	FALSE	canonical	3	453	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGCTTGGCTCCTTTG	7839	False	NA	-6	True	ATTAAA	-14	NA	80426134	80419488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80420157_80421441
ES.3336.8	chr10	-	1301	5	NNC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	179.85619255394	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTGCTTGGCTCCTTT	7817	False	NA	-7	True	ATTAAA	-13	NA	80426156	80419489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422811_80426100
ES.33360.1	chr8	-	1710	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	-26	-9	-26	-5	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTGAGTTCTTGTTTTA	NA	False	NA	-8	True	AATAAA	-26	NA	83500815	83490240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ES.33360.10	chr8	-	5926	4	ISM	ENSMUSG00000031711.8	ENSMUST00000209601.2	2988	6	-519	0	-519	0	intron_retention	FALSE	canonical	3	422	junction_3	31.8433666561813	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83498187	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297
ES.33360.12	chr8	-	1671	10	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	182	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	158.280654004521	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTTTTGGTACTGAGT	NA	False	NA	-18	True	AATAAA	-16	NA	83500561	83490250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500460
ES.33360.13	chr8	-	3070	8	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	5	-2	intron_retention	FALSE	canonical	3	422	junction_1	48.7806418613794	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTTTGGTACTGAG	NA	False	NA	-19	True	AATAAA	-15	NA	83500784	83490251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ES.33360.14	chr8	-	4702	7	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	422	junction_2	44.913497105238	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTTTGGTACTGAG	NA	False	NA	-19	True	AATAAA	-15	NA	83500791	83490251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83499641_83500685
ES.33360.16	chr8	-	3191	9	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	422	junction_3	45.3842965683065	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTTTGGTACTGAG	NA	False	NA	-19	True	AATAAA	-15	NA	83500786	83490251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83499641_83500685
ES.33360.17	chr8	-	1403	7	NNC	ENSMUSG00000031711.8	novel	761	8	NA	NA	-48	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	231.716361576437	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTTTGGTACTGAG	NA	False	NA	-19	True	AATAAA	-15	NA	83496650	83490251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_83491099_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83496571
ES.33360.18	chr8	-	5422	6	NIC	ENSMUSG00000031711.8	novel	761	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	422	junction_2	42.2213216278221	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTTTGGTACTGAG	NA	False	NA	-19	True	AATAAA	-15	NA	83500786	83490251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83499641_83500685
ES.33360.19	chr8	-	3514	8	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	11	-3	intron_retention	FALSE	canonical	3	422	junction_3	36.1024618980762	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTTTTGGTACTGA	NA	False	NA	-20	True	AATAAA	-14	NA	83500763	83490252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83497988_83499508_83499641_83500685
ES.33360.2	chr8	-	5018	7	NIC	ENSMUSG00000031711.8	novel	761	8	NA	NA	3	3	intron_retention	FALSE	canonical	3	422	junction_3	38.5429053854994	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGTACTGAGTTCTT	NA	False	NA	-14	True	AATAAA	-20	NA	83500740	83490246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83499641_83500685
ES.33360.20	chr8	-	1243	6	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.198486371617	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTACTTTTGGTACTG	NA	False	NA	-21	True	AATAAA	-13	NA	83500787	83490253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_83491095_83495951_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ES.33360.21	chr8	-	3647	7	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-11	-344	intron_retention	FALSE	canonical	3	422	junction_2	44.8234189781289	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGGAAATATATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	83500754	83490593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83499641_83500685
ES.33360.22	chr8	-	3282	8	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-11	-346	intron_retention	FALSE	canonical	3	422	junction_3	41.6408355304438	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAAATATATTT	NA	False	NA	NA	False	AATAAA	-15	NA	83500754	83490595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83499641_83500685
ES.33360.23	chr8	-	1259	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	44	372	-2	-372	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACATAATAAAATACATGA	NA	False	NA	NA	False	NA	NA	NA	83500745	83490621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ES.33360.24	chr8	-	2680	5	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-9	-2069	intron_retention	FALSE	canonical	3	476	junction_1	33.7231374578345	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCTTAGTGTGTTGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	83500752	83493207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83493403_83493841_83493969_83495948_83496029_83497429_83499641_83500685
ES.33360.3	chr8	-	3943	2	NIC	ENSMUSG00000031711.8	novel	895	5	NA	NA	-635	1	intron_retention	FALSE	canonical	3	422	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGGTACTGAGTTC	NA	False	NA	-16	True	AATAAA	-18	NA	83494801	83490248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83492688_83493297
ES.33360.4	chr8	-	1581	8	FSM	ENSMUSG00000031711.8	ENSMUST00000211462.2	761	8	-43	-777	3	0	multi-exon	FALSE	canonical	2	30	junction_6	164.077259054311	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500786	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83499508_83499641_83500685
ES.33360.5	chr8	-	1365	6	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	191.504986880238	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500777	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83499508_83499641_83500685
ES.33360.6	chr8	-	1046	3	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.5	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500754	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_83491095_83499508_83499641_83500685
ES.33360.8	chr8	-	3678	8	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	422	junction_3	41.6408355304438	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500804	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83499641_83500685
ES.33360.9	chr8	-	1657	9	NNC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	168.735693838026	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500774	83490249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497511_83499501_83499641_83500685
ES.33361.1	chr8	+	177	1	Intergenic	novelGene_27171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAAGAA	1056	False	NA	NA	False	NA	NA	NA	83703155	83703332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_83703200_83703300
ES.33362.1	chr8	-	211	1	Intergenic	novelGene_27172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTGCTTAAGGCCTA	NA	False	NA	NA	False	NA	NA	NA	83790456	83790245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_83790200_83790500
ES.33363.1	chr8	+	5107	21	NNC	ENSMUSG00000031709.16	novel	4631	18	NA	NA	111	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.22226242670917	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTGTACTTGAGTTT	NA	False	NA	8	True	AATAAA	-20	NA	83892091	83999568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_83892253_83937097_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
ES.33363.2	chr8	+	1661	1	NIC	ENSMUSG00000031709.16	novel	4631	18	NA	NA	161	-103777	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATATGCTAGCGTGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	83892141	83893802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_83892100_83893800
ES.33363.3	chr8	+	5642	22	NNC	ENSMUSG00000031709.16	novel	5334	21	NA	NA	166	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	4.13929786897157	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTGTACTTGAGTTT	NA	False	NA	8	True	AATAAA	-20	NA	83892146	83999568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522_83998589_83998627
ES.33363.4	chr8	+	5677	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-337	-6	171	6	multi-exon	FALSE	canonical	2	4	junction_8	3.27528624703246	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTACTTGAGTTTC	NA	False	NA	9	True	AATAAA	-21	NA	83892151	83999569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
ES.33363.5	chr8	+	7302	20	ISM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	-323	1	185	-1	intron_retention	FALSE	canonical	2	4	junction_8	2.97356776670011	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCGATGTCCTTGTACTT	NA	False	NA	2	True	AATAAA	-14	NA	83892165	83999562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772
ES.33364.1	chr8	-	199	1	Intergenic	novelGene_27173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGCAAGAAAACCAACT	NA	False	NA	NA	False	NA	NA	NA	83897481	83897282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_83897300_83897500
ES.33365.1	chr8	+	1657	6	FSM	ENSMUSG00000031710.5	ENSMUST00000034146.5	1636	6	-433	412	-433	-412	multi-exon	FALSE	canonical	0	0	junction_1	1.26491106406735	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATCAAATGAACAGC	NA	False	NA	NA	False	AATAAA	-8	NA	84016547	84024669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84017338_84018030_84018230_84020516_84020718_84020811_84020914_84021797_84021979_84024485
ES.33366.1	chr8	-	6381	1	Genic_Genomic	ENSMUSG00000035151.13	novel	NA	NA	NA	NA	5616	2	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGCTATTGCAGCACT	NA	False	NA	NA	False	AATAAA	-20	NA	84045639	84039258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_84039300_84045600
ES.33366.10	chr8	-	4329	8	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	30.9001023708759	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	8145	False	NA	-2	True	AATAAA	-18	NA	84059140	84039655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84057720_84057888_84058978
ES.33366.11	chr8	-	4661	9	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.4650216358312	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	8184	False	NA	-2	True	AATAAA	-18	NA	84059101	84039655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058617
ES.33366.12	chr8	-	4512	1	NIC	ENSMUSG00000035151.13	novel	4704	9	NA	NA	7088	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	821	False	NA	-2	True	AATAAA	-18	NA	84044167	84039655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84039700_84044200
ES.33366.13	chr8	-	4018	9	NNC	ENSMUSG00000035151.13	novel	4704	9	NA	NA	282	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.4650216358312	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAGCCTTTCTGTGGAT	9484	False	NA	-3	True	AATAAA	-17	NA	84057801	84039656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84042426_84042497_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739
ES.33366.15	chr8	-	4322	10	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	-30	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.584756995837	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAAGCCTTTCTGTGGAT	8222	False	NA	-3	True	AATAAA	-17	NA	84059063	84039656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058391_84058453_84058978
ES.33366.16	chr8	-	3996	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	14	309	14	-309	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGATCATGATGTGTAT	8184	False	NA	NA	False	AATGAA	-21	NA	84059101	84039959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.17	chr8	-	3011	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	15	1293	15	1172	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTGTTTATTT	8185	False	NA	NA	False	NA	NA	NA	84059100	84040943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.2	chr8	-	4690	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	21	-392	21	2	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGCTATTGCAGCACT	8191	False	NA	NA	False	AATAAA	-20	NA	84059094	84039258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.3	chr8	-	4672	9	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	27.050877989448	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAAGCTATTGCAGCAC	8191	False	NA	NA	False	AATAAA	-19	NA	84059094	84039259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043547_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.4	chr8	-	4312	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	7	0	7	0	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGATGCTTGA	8177	False	NA	3	True	AATAAA	-23	NA	84059108	84039650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.5	chr8	-	4516	10	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.584756995837	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTTCTGTGGATGCT	8225	False	NA	0	True	AATAAA	-20	NA	84059060	84039653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058197_84058453_84058978
ES.33366.6	chr8	-	4284	9	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	27.050877989448	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTTTCTGTGGATGC	8184	False	NA	-1	True	AATAAA	-19	NA	84059101	84039654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043547_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ES.33366.7	chr8	-	5548	5	NIC	ENSMUSG00000035151.13	novel	4704	9	NA	NA	1929	-4	intron_retention	FALSE	canonical	3	74	junction_3	8.8423695919137	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTTTCTGTGGATGC	NA	False	NA	-1	True	AATAAA	-19	NA	84049326	84039654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84043091_84043429_84043564_84044359_84046177_84048061_84048192_84049295
ES.33366.8	chr8	-	4223	8	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.8356032737056	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCTTTCTGTGGATGC	8184	False	NA	-1	True	AATAAA	-19	NA	84059101	84039654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84046042_84046177_84048061_84048192_84049295_84049385_84055740_84055770_84057739_84057888_84058978
ES.33366.9	chr8	-	4300	8	NNC	ENSMUSG00000035151.13	novel	4319	9	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.9001023708759	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCCTTTCTGTGGATG	8182	False	NA	-2	True	AATAAA	-18	NA	84059103	84039655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049421_84057739_84057888_84058978
ES.33367.1	chr8	+	2407	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-113	-1	-102	1	multi-exon	TRUE	canonical	3	23	junction_5	6.81834260787527	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGCCAAGAGATTCGT	NA	False	NA	13	True	AATAAA	-19	NA	84116393	84153461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.10	chr8	+	3899	15	FSM	ENSMUSG00000002190.14	ENSMUST00000002259.13	3902	15	2	1	2	-1	multi-exon	FALSE	canonical	3	7	junction_1	9.63756468519016	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTCTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	84116497	84155180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84116607_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.11	chr8	+	2234	14	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5646599662505	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGAGCCAAGAGATT	NA	False	NA	10	True	AATAAA	-16	NA	84116497	84153458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122238_84123630_84123708_84124277_84124337_84126577_84126720_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.12	chr8	+	2201	15	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.6531435152031	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGAGCCAAGAGATTC	NA	False	NA	11	True	AATAAA	-17	NA	84116497	84153459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116607_84122071_84122222_84123607_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.13	chr8	+	2348	15	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.8592573128992	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATTCGTCTCCTTAGA	NA	False	NA	22	True	AATAAA	-28	NA	84116497	84153470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151163_84151363_84152153_84152255_84153154
ES.33367.14	chr8	+	3530	15	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	4	-500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.075916481713	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGCTTCAGATATTTATA	NA	False	NA	NA	False	AATAAA	-22	NA	84116499	84154681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122238_84123607_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151333_84152153_84152255_84153154
ES.33367.15	chr8	+	3649	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-6	-1350	5	-371	multi-exon	FALSE	canonical	3	23	junction_5	6.81834260787527	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGAGCAACCGAGT	NA	False	NA	NA	False	ACTAAA	-19	NA	84116500	84154810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.16	chr8	+	3577	13	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	7158	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	10.7767754402181	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	84123664	84155181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151333_84152153_84152255_84153154
ES.33367.17	chr8	+	3521	11	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	9738	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8942942095287	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTCTTGCTTTC	210	False	NA	NA	False	AATAAA	-18	NA	84126244	84155181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84126343_84126577_84126720_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.18	chr8	+	3588	12	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	9751	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7740434504699	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTGTGTGTCTTGCTT	223	False	NA	NA	False	AATAAA	-16	NA	84126257	84155179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84126343_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.2	chr8	+	3971	14	NIC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	10.4473886208029	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTCTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	84116466	84155180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.3	chr8	+	3026	14	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	-16	-2	intron_retention	FALSE	canonical	0	0	junction_6	13.0465711108888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGAGCCAAGAGATT	NA	False	NA	10	True	AATAAA	-16	NA	84116479	84153458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116607_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134905_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84152255_84153154
ES.33367.4	chr8	+	2285	15	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	10.2362401420101	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACATGAGAGCCAAGAGA	NA	False	NA	8	True	AATAAA	-14	NA	84116480	84153456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151333_84152153_84152255_84153154
ES.33367.5	chr8	+	4040	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-24	-1723	-13	2	multi-exon	FALSE	canonical	3	23	junction_5	6.81834260787527	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTGCTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	84116482	84155183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ES.33367.6	chr8	+	3120	14	NNC	ENSMUSG00000002190.14	novel	2293	15	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_2	11.2922448122332	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGAGCCAAGAGATT	NA	False	NA	10	True	AATAAA	-16	NA	84116484	84153458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122238_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84152255_84153154
ES.33367.8	chr8	+	3917	14	NNC	ENSMUSG00000002190.14	novel	3902	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.3279081665006	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTCTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	84116495	84155180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84116730_84122071_84122222_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151333_84152153_84152255_84153154
ES.33367.9	chr8	+	657	5	ISM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-9	26744	2	-26744	5prime_fragment	FALSE	canonical	3	25	junction_2	6.59545297913646	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAAGTTTTAAGACTTT	NA	False	NA	NA	False	GATAAA	-12	NA	84116497	84126716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577
ES.33368.1	chr8	-	4556	2	NNC	ENSMUSG00000063253.12	novel	673	3	NA	NA	3076	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACTATCTGAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	84161380	84156719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84157724_84157828
ES.33368.2	chr8	-	1867	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	-80	-1378	-78	1	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	7339	False	NA	-1	True	AATAAA	-17	NA	84169214	84161122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
ES.33368.4	chr8	-	3786	4	NNC	ENSMUSG00000063253.12	novel	1791	4	NA	NA	-1001	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	138.205161505157	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTGTGTGTGTGTGTT	9679	False	NA	-3	True	AATAAA	-15	NA	84166874	84161124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84162670_84164181_84164266_84164613_84166102_84166205
ES.33368.5	chr8	-	3655	2	ISM	ENSMUSG00000063253.12	ENSMUST00000212473.2	673	3	-15	4413	-9	-2	5prime_fragment	FALSE	canonical	3	309	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTGTGTGTGTGTGT	7408	False	NA	-4	True	AATAAA	-14	NA	84169145	84161125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84164686_84169050
ES.33368.6	chr8	-	400	4	FSM	ENSMUSG00000063253.12	ENSMUST00000212031.2	409	4	2	7	-2	-7	multi-exon	FALSE	canonical	3	281	junction_1	12.1928941054479	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGATTGCTGCTTTTT	7421	False	NA	NA	False	AGTAAA	-19	NA	84169132	84162507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84169050
ES.33369.1	chr8	-	482	1	FSM	ENSMUSG00000110617.2	ENSMUST00000211819.2	1746	1	1599	-335	1599	335	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGGAGAACACTGCTAAA	NA	False	NA	NA	False	NA	NA	NA	84204246	84203764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84203800_84204200
ES.3337.1	chr10	+	1854	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	-16	-34	-8	34	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCGGAGCCTAGAGGT	NA	False	NA	47	True	NA	NA	NA	80438697	80451651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.10	chr10	+	3946	6	ISM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	2	0	2	0	intron_retention	FALSE	canonical	3	584	junction_5	40.8538859840775	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438715	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175
ES.3337.11	chr10	+	1702	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	244.873720290457	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438716	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450536
ES.3337.12	chr10	+	1647	6	FSM	ENSMUSG00000113949.2	ENSMUST00000220669.2	639	6	11	-1019	3	3	multi-exon	FALSE	canonical	1	1	junction_3	267.140113049314	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCTTTATCTGTGGATG	NA	False	NA	16	True	AATAAA	-16	NA	80438716	80451620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80446861_80446964_80448175_80448294_80450437
ES.3337.13	chr10	+	1407	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	3	1	3	-1	multi-exon	FALSE	canonical	3	56	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCGTTTGCACTCAGG	NA	False	NA	2	True	AATAAA	-14	NA	80438716	80443487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80438784_80442147
ES.3337.15	chr10	+	4459	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	5	0	intron_retention	FALSE	canonical	2	23	junction_6	306.096956761702	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438718	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
ES.3337.17	chr10	+	5894	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	31	junction_6	288.871799708221	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438721	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80449903_80450437
ES.3337.18	chr10	+	1869	8	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	293.153995889741	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438723	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80439072_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.19	chr10	+	3743	6	NIC	ENSMUSG00000035370.10	novel	4517	6	NA	NA	-3129	0	intron_retention	FALSE	canonical	3	14	junction_2	322.180942949765	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80442147_80442704_80444636_80444685_80445163_80445632_80446861_80448294_80450437
ES.3337.2	chr10	+	4784	1	Genic_Genomic	ENSMUSG00000035370.10_ENSMUSG00000113640.2_ENSMUSG00000113949.2	novel	NA	NA	NA	NA	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	False	NA	3	True	AATAAA	-15	NA	80438704	80443488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_80438700_80443500
ES.3337.20	chr10	+	4247	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_3	295.616164420464	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438725	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80442147_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.21	chr10	+	4416	4	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	643	junction_1	29.6348143611905	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438725	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80444636_80444685_80445163_80448294_80450437
ES.3337.22	chr10	+	3882	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	307.468398907157	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438725	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80442629_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80449903_80450437
ES.3337.23	chr10	+	6420	6	NNC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-3128	-2	intron_retention	FALSE	canonical	3	9	junction_3	307.042277219278	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCCTTTATCTGT	NA	False	NA	11	True	AATAAA	-11	NA	80438726	80451615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80444685_80445163_80445291_80445474_80445632_80446861_80446964_80448175
ES.3337.24	chr10	+	1757	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438726	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.25	chr10	+	3556	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	288.690357388292	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438726	80451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80443912_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.26	chr10	+	3482	5	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	643	junction_1	22.4763764873255	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438726	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80444636_80445293_80445474_80445632_80446861_80448294_80450437
ES.3337.27	chr10	+	1743	6	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	254.352039504306	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCCTTTATCTGTGGAT	NA	False	NA	15	True	AATAAA	-15	NA	80438728	80451619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.28	chr10	+	1737	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	248.125640217478	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438728	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446913_80446964_80448175_80448294_80450437
ES.3337.29	chr10	+	1893	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_6	300.594580857367	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGCAGGGCCTTTATC	NA	False	NA	8	True	AATAAA	-8	NA	80438728	80451612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445225_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
ES.3337.3	chr10	+	4486	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-1	-2	intron_retention	TRUE	non_canonical	0	0	junction_6	310.091625695585	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCCTTTATCTGT	NA	False	NA	11	True	AATAAA	-11	NA	80438704	80451615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449716_80449903_80450437
ES.3337.30	chr10	+	3866	6	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	-5	intron_retention	FALSE	canonical	3	31	junction_2	242.688771886958	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGCAGGGCCTTTATC	NA	False	NA	8	True	AATAAA	-8	NA	80438728	80451612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445225_80445293_80445474_80445632_80446861_80446964_80448175
ES.3337.31	chr10	+	1975	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	288.559830035651	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438728	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449716_80449903_80450437
ES.3337.32	chr10	+	3016	6	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	9	junction_3	263.986666329949	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438729	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445291_80445474_80446964_80448175_80448294_80450437
ES.3337.33	chr10	+	3112	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	314.798801958149	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438730	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80443507_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.34	chr10	+	2858	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	18	-1072	-4	1072	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTGCCTTCTTTTTAA	NA	False	NA	NA	False	AATACA	-18	NA	80438731	80452689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.35	chr10	+	4102	9	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	306.228239022792	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCCTTTATCTGT	NA	False	NA	11	True	AATAAA	-11	NA	80438731	80451615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80442147_80444314_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80449716_80449903_80450437
ES.3337.37	chr10	+	2106	7	FSM	ENSMUSG00000113949.2	ENSMUST00000180350.3	1271	7	-15	-820	-15	0	multi-exon	FALSE	canonical	3	35	junction_1	236.742945453972	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438775	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.38	chr10	+	1442	3	NIC	ENSMUSG00000113949.2	novel	1271	7	NA	NA	213	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	349.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80439003	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80439148_80448175_80448294_80450437
ES.3337.39	chr10	+	3487	7	NNC	ENSMUSG00000113949.2	novel	1271	7	NA	NA	213	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	293.693150527326	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80439003	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80449903_80450437
ES.3337.4	chr10	+	1986	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	287.865402221105	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCCTTTATCTGTG	NA	False	NA	12	True	AATAAA	-12	NA	80438707	80451616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449725_80449903_80450437
ES.3337.40	chr10	+	1440	2	NIC	ENSMUSG00000113640.2	novel	359	2	NA	NA	-39	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCGTTTGCACTCAG	NA	False	NA	1	True	AATAAA	-13	NA	80439046	80443486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80439148_80442147
ES.3337.41	chr10	+	1707	6	NIC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-2782	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	327.185329744474	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80439072	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80439148_80444636_80444685_80445163_80445293_80445474_80445632_80448175_80448294_80450437
ES.3337.42	chr10	+	1926	6	NNC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-2779	0	intron_retention	FALSE	canonical	3	31	junction_2	304.074069923761	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80439075	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80439148_80444636_80444685_80445225_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.43	chr10	+	4424	8	NNC	ENSMUSG00000035370.10	novel	4517	6	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	314.229605381096	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80441795	80451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80444314_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
ES.3337.44	chr10	+	4571	6	FSM	ENSMUSG00000035370.10	ENSMUST00000178231.2	4516	6	-57	2	-57	-2	multi-exon	FALSE	canonical	3	584	junction_4	45.0271029492238	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCCTTTATCTGT	NA	False	NA	11	True	AATAAA	-11	NA	80441797	80451615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.45	chr10	+	2047	7	NIC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-260	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	244.454097031642	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGCCTTTATCTGT	NA	False	NA	11	True	AATAAA	-11	NA	80442388	80451615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80442704_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.46	chr10	+	3304	5	NNC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	895	0	intron_retention	FALSE	canonical	3	9	junction_1	280.245428151826	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80443543	80451617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80445291_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.5	chr10	+	4295	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	-1	1	intron_retention	FALSE	canonical	3	56	junction_1	229.039601136766	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438712	80451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.6	chr10	+	1370	3	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	3	combination_of_known_splicesites	TRUE	canonical	2	9	junction_1	345	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCTTTATCTGTGGATG	NA	False	NA	16	True	AATAAA	-16	NA	80438714	80451620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80448175_80448294_80450437
ES.3337.7	chr10	+	1468	4	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	305.097070163288	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCCTTTATCTGTG	NA	False	NA	12	True	AATAAA	-12	NA	80438714	80451616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80446861_80446964_80448175_80448294_80450437
ES.3337.8	chr10	+	4473	6	NIC	ENSMUSG00000035370.10	novel	4516	6	NA	NA	-3140	-1	intron_retention	FALSE	canonical	3	56	junction_1	247.406871367794	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCCTTTATCTGTG	NA	False	NA	12	True	AATAAA	-12	NA	80438714	80451616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80438784_80442147_80444685_80445163_80445632_80446861_80446964_80448175_80448294_80450437
ES.3337.9	chr10	+	1860	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	304.671117429792	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438715	80451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80447696_80447754_80448175_80448294_80450437
ES.33370.1	chr8	+	570	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	50	3	-37	-3	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCATCTGTGCTACTT	NA	False	NA	20	True	AATAAA	-20	NA	84293349	84298252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84293560_84297458_84297628_84298061
ES.33371.1	chr8	+	4251	1	Genic_Genomic	ENSMUSG00000110580.2	novel	NA	NA	NA	NA	-2223	-7848	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84300449	84304700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_84300400_84304700
ES.33372.1	chr8	+	13403	2	NNC	ENSMUSG00000110580.2	novel	2899	2	NA	NA	3801	7466	intron_retention	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAACCTAAGGCTAGGCT	NA	False	NA	NA	False	NA	NA	NA	84306473	84320014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84317700_84317837
ES.33372.2	chr8	+	1588	1	Genic_Genomic	ENSMUSG00000110580.2	novel	NA	NA	NA	NA	8309	21	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAACCAGATGGGTGGC	NA	False	NA	NA	False	NA	NA	NA	84310981	84312569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_84311000_84312600
ES.33372.3	chr8	+	4798	2	Antisense	novelGene_ENSMUSG00000031708.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAACCTAAGGCTAGGCT	NA	False	NA	NA	False	NA	NA	NA	84315075	84320014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_84317763_84317903
ES.33372.4	chr8	+	3205	2	Antisense	novelGene_ENSMUSG00000031708.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATATATATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	84315077	84318420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_84317700_84317837
ES.33372.5	chr8	+	2470	2	Antisense	novelGene_ENSMUSG00000031708.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAACCTAAGGCTAGGCT	NA	False	NA	NA	False	NA	NA	NA	84317404	84320014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_84317755_84317894
ES.33372.6	chr8	+	876	2	Antisense	novelGene_ENSMUSG00000031708.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATATATATATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	84317404	84318420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_84317755_84317894
ES.33373.1	chr8	-	1181	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	-20	-3	-10	1	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGTTCTTTAGGG	NA	False	NA	-2	True	AATAAA	-16	NA	84321126	84298325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.10	chr8	-	1119	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1134.91529297222	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321073	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299377_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.11	chr8	-	1156	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1134.78466814438	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321074	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299147_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.13	chr8	-	1644	11	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	3555	junction_3	288.434134595751	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321090	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84300552_84301106_84301158_84320968
ES.33373.14	chr8	-	1087	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_10	1139.58096546911	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321087	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84301106_84301158_84320968
ES.33373.17	chr8	-	771	8	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	1772.80462682664	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321103	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ES.33373.18	chr8	-	1023	11	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	211	junction_10	1440.8586363693	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321067	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84320968
ES.33373.19	chr8	-	1117	13	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	55	junction_1	1121.05263963533	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321097	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298533_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.2	chr8	-	1129	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	-9	0	-6	0	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321122	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ES.33373.20	chr8	-	1569	12	NIC	ENSMUSG00000031708.18	novel	1272	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	3555	junction_3	290.961216920857	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321102	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300552_84301106_84301158_84320968
ES.33373.21	chr8	-	2071	6	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	3555	junction_2	350.557042433896	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321096	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298688_84298860_84298950_84299026_84299576_84299656_84300552_84301106_84301158_84320968
ES.33373.23	chr8	-	1006	11	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	1190.40285617937	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321051	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84301106_84301158_84320968
ES.33373.26	chr8	-	1059	11	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1573.83347594337	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299248_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84301106_84301158_84320968
ES.33373.27	chr8	-	1166	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1125.61363511445	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321096	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301176_84320968
ES.33373.28	chr8	-	1097	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	1128.6641409452	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321104	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299715_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.3	chr8	-	1042	10	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	13	junction_6	1615.54655354362	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321074	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ES.33373.32	chr8	-	1127	11	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	1231.30630226601	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321104	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299848_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.35	chr8	-	1307	14	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	1441.0750548148	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321084	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84308924_84309096_84320968
ES.33373.36	chr8	-	1098	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1125.61363511445	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321055	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301149_84320968
ES.33373.37	chr8	-	1082	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1135.70567881335	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321051	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298544_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.40	chr8	-	1212	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	3555	junction_3	315.097492456011	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGACTGTGTGTTCTTT	NA	False	NA	-6	True	AATAAA	-12	NA	84321074	84298329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.43	chr8	-	1375	10	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	3555	junction_2	344.233770697892	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGACTGTGTGTTCTT	NA	False	NA	-7	True	AATAAA	-11	NA	84321073	84298330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298688_84298860_84298950_84299026_84299085_84299177_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.44	chr8	-	1079	13	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1447.43142948312	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGACTGTGTGTTCTT	NA	False	NA	-7	True	AATAAA	-11	NA	84321042	84298330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298565_84298641_84298684_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300540_84301103_84301158_84320968
ES.33373.46	chr8	-	1139	12	NNC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1169.2643374828	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGACTGTGTGTTCTT	NA	False	NA	-7	True	AATAAA	-11	NA	84321095	84298330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84298595_84298850_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.5	chr8	-	1248	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	3555	junction_3	315.250392414277	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321103	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.6	chr8	-	1322	11	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	3555	junction_3	329.065586167864	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321089	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.7	chr8	-	1035	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	1174.35431177596	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321099	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ES.33373.9	chr8	-	1168	11	NIC	ENSMUSG00000031708.18	novel	1120	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	487	junction_8	1101.20952139	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321074	84298328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ES.33374.1	chr8	+	2291	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	-38	743	-38	-743	multi-exon	FALSE	canonical	3	562	junction_2	45.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTCGACTCTGTTTGA	NA	False	NA	17	True	ATTAAA	-26	NA	84334783	84338539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84335172_84336442_84337024_84337217
ES.33374.10	chr8	+	1057	3	NNC	ENSMUSG00000005483.11	novel	2854	3	NA	NA	181	-1689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGCGCACTAGACTACAG	NA	False	NA	9	True	AATATA	-15	NA	84335362	84337593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84335463_84336442_84337024_84337217
ES.33374.2	chr8	+	1331	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	-16	1681	-16	-1681	multi-exon	FALSE	canonical	3	562	junction_2	45.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGACTACAGTGGTTTTT	NA	False	NA	17	True	AATATA	-23	NA	84334805	84337601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84335172_84336442_84337024_84337217
ES.33374.3	chr8	+	4153	2	ISM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	11	-974	11	974	intron_retention	FALSE	canonical	3	653	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84334832	84340256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84335172_84336442
ES.33374.4	chr8	+	3971	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	23	-998	23	998	multi-exon	FALSE	canonical	3	562	junction_2	45.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATGGCACATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	84334844	84340280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84335172_84336442_84337024_84337217
ES.33374.5	chr8	+	2209	3	NNC	ENSMUSG00000005483.11	novel	2996	3	NA	NA	48	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	326.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGCAGTCCTTCGACT	NA	False	NA	9	True	ATTAAA	-18	NA	84334869	84338531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84335172_84336442_84337036_84337217
ES.33374.6	chr8	+	1448	2	ISM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	59	1683	59	-1683	intron_retention	FALSE	canonical	3	653	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGACTACAGTGGTTT	NA	False	NA	15	True	AATATA	-21	NA	84334880	84337599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84335172_84336442
ES.33374.7	chr8	+	2936	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	62	-2	62	2	multi-exon	FALSE	canonical	3	562	junction_2	45.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACGAGGTGCTCGGCTAC	NA	False	NA	NA	False	AATAAA	-25	NA	84334883	84339284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84335172_84336442_84337024_84337217
ES.33374.8	chr8	+	5354	1	Genic_Genomic	ENSMUSG00000005483.11	novel	NA	NA	NA	NA	105	998	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATGGCACATGCCTTT	NA	False	NA	NA	False	NA	NA	NA	84334926	84340280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_84334900_84340300
ES.33374.9	chr8	+	2667	1	NIC	ENSMUSG00000005483.11	novel	2996	3	NA	NA	109	-1685	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCACTAGACTACAGTGGT	NA	False	NA	13	True	AATATA	-19	NA	84334930	84337597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84334900_84337600
ES.33375.1	chr8	+	172	1	Intergenic	novelGene_27174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAAAAATAA	9881	False	NA	NA	False	NA	NA	NA	84366662	84366834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84366700_84366800
ES.33376.1	chr8	+	1950	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-331	-97	-331	97	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTCTCCCTGCTTTCT	NA	False	NA	23	True	NA	NA	NA	84378974	84391420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ES.33376.10	chr8	+	3285	2	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	8583	-13	intron_retention	FALSE	canonical	3	1167	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTGTCCTGGAAC	NA	False	NA	3	True	NA	NA	NA	84387909	84391310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84390631_84390746
ES.33376.2	chr8	+	1526	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	-17	13	-17	-13	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTGTCCTGGAAC	NA	False	NA	3	True	NA	NA	NA	84379288	84391310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ES.33376.3	chr8	+	1620	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	-17	-13	intron_retention	FALSE	canonical	3	964	junction_1	105.526489565417	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGGCTGTCCTGGAAC	NA	False	NA	3	True	NA	NA	NA	84379288	84391310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84379367_84387587_84387910_84388583_84389045_84389677_84389791_84390548_84390631_84390746
ES.33376.4	chr8	+	1292	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	2	94	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	457.870549391419	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTGCTCTCCCTGCTT	NA	False	NA	20	True	NA	NA	NA	84379307	84391417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84379367_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ES.33376.6	chr8	+	1192	8	NNC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	3	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	413.756805234127	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCTGCTCTCCCTGCTT	NA	False	NA	20	True	NA	NA	NA	84379317	84391417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746_84390884_84391295
ES.33376.7	chr8	+	3300	8	Fusion	ENSMUSG00000019433.10_ENSMUSG00000019464.7	novel	1522	7	NA	NA	5	128	intron_retention	FALSE	canonical	0	0	junction_7	413.756805234127	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTTGTTTTTTAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	84379319	84396739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746_84390884_84394507
ES.33377.1	chr8	-	6554	20	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	18	7	intron_retention	TRUE	canonical	0	0	junction_4	89.9380211336083	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGTGAGCATCGCCT	NA	False	NA	-2	True	AATAAA	-21	NA	84425778	84393157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398535_84398599_84398784_84398880_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.10	chr8	-	5736	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	13	913	1	-913	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTAGCTTTGGTCACCTT	NA	False	NA	NA	False	NA	NA	NA	84425795	84394077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.11	chr8	-	6915	21	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	3	12	intron_retention	FALSE	canonical	0	0	junction_17	67.6005917133867	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCATCTGGACTGGAG	NA	False	NA	-6	True	TTTAAA	-45	NA	84425805	84396707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411329_84411411_84413668_84417830_84419264_84419566_84425595
ES.33377.12	chr8	-	3162	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-43	3543	-43	12	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCATCTGGACTGGAG	NA	False	NA	-6	True	TTTAAA	-45	NA	84425851	84396707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.14	chr8	-	3047	22	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.6017978871288	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCCTCTGTGTGCATC	NA	False	NA	-16	True	TTTAAA	-35	NA	84425810	84396717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396934_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.15	chr8	-	6348	19	ISM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	2970	-1	2970	1	intron_retention	FALSE	canonical	3	231	junction_13	30.6120689505316	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84417719	84396718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668
ES.33377.16	chr8	-	4033	21	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	19	1	intron_retention	FALSE	canonical	0	0	junction_18	104.379164587575	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425777	84396718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84418170_84418268_84419264_84419566_84425595
ES.33377.17	chr8	-	3175	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-5	1	intron_retention	FALSE	canonical	3	231	junction_12	29.7011784277998	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGCCTCTGTGTGCAT	NA	False	NA	-17	True	TTTAAA	-34	NA	84425801	84396718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.18	chr8	-	3000	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	-5	0	-5	0	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGCCTCTGTGTGCA	NA	False	NA	-18	True	TTTAAA	-33	NA	84420694	84396719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ES.33377.2	chr8	-	6535	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	18	-3558	18	3	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAAAATGTGAGCATC	NA	False	NA	-6	True	AATAAA	-17	NA	84420671	84393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ES.33377.20	chr8	-	2089	5	NIC	ENSMUSG00000057672.17	novel	2995	22	NA	NA	-207	0	intron_retention	FALSE	canonical	3	265	junction_4	28.1458256229943	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGCCTCTGTGTGCA	NA	False	NA	-18	True	TTTAAA	-33	NA	84400435	84396719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84398599_84398784_84398962_84399930
ES.33377.22	chr8	-	6879	20	NNC	ENSMUSG00000057672.17	novel	2995	22	NA	NA	-3	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	84.3407217227848	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTCAGCCTCTGTGTG	NA	False	NA	-20	True	TTTAAA	-31	NA	84420692	84396721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84404247_84404334_84404473_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ES.33377.23	chr8	-	4599	18	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	33	2	intron_retention	FALSE	canonical	3	231	junction_9	26.1667529880518	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATTTTCAGCCTCTG	NA	False	NA	-24	True	TTTAAA	-27	NA	84425763	84396725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.24	chr8	-	3145	23	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.0024306896014	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATTTTCAGCCTCTG	NA	False	NA	-24	True	TTTAAA	-27	NA	84425792	84396725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397736_84397797_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.25	chr8	-	3120	23	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	84.5386727485276	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCATTTTCAGCCTCT	NA	False	NA	-25	True	TTTAAA	-26	NA	84425747	84396726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413149_84413231_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.26	chr8	-	3153	21	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	10	1	intron_retention	FALSE	canonical	0	0	junction_10	103.16126937955	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCATTTTCAGCCTCT	NA	False	NA	-25	True	TTTAAA	-26	NA	84425786	84396726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400340_84404152_84404245_84404559_84404636_84407582_84407727_84407808_84407919_84409786_84409932_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.27	chr8	-	3338	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	19	1	intron_retention	FALSE	canonical	3	231	junction_12	29.7776762021485	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCATTTTCAGCCTCT	NA	False	NA	-25	True	TTTAAA	-26	NA	84425777	84396726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.29	chr8	-	2118	17	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-3132	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	73.8025236695873	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84411350	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84410027_84410223_84410631_84410846_84411264
ES.33377.30	chr8	-	3439	8	NIC	ENSMUSG00000057672.17	novel	3070	9	NA	NA	628	0	intron_retention	FALSE	canonical	3	265	junction_4	26.5206888819938	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84401568	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84400023_84400109
ES.33377.31	chr8	-	6879	19	NIC	ENSMUSG00000057672.17	novel	3005	22	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_4	69.5961010685988	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84425778	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.32	chr8	-	1840	14	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	379	0	intron_retention	FALSE	canonical	3	231	junction_12	29.2295546306358	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84407839	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808
ES.33377.33	chr8	-	7461	18	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	19	0	intron_retention	FALSE	canonical	3	231	junction_10	27.6310341544233	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84425777	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84398071_84398345_84398423_84398535_84398962_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84417830_84419264_84419566_84425595
ES.33377.34	chr8	-	2704	21	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	1300	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.7386706394509	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84419389	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407909_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264
ES.33377.35	chr8	-	1688	14	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-1920	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	82.5064458661713	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84410138	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027
ES.33377.36	chr8	-	3505	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	231	junction_13	28.93717332429	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84425795	84396727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.39	chr8	-	3377	20	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	27	-1	intron_retention	FALSE	canonical	3	231	junction_11	29.1318523260125	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACATGCATTTTCAGCCT	NA	False	NA	-27	True	TTTAAA	-24	NA	84425699	84396728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.4	chr8	-	6564	22	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	7	3	intron_retention	FALSE	canonical	0	0	junction_7	66.1380059244637	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAAAATGTGAGCATC	NA	False	NA	-6	True	AATAAA	-17	NA	84425789	84393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398880_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.42	chr8	-	3067	22	NNC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.7749547411613	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACAAGCCTTTGGGG	NA	False	NA	-54	True	NA	NA	NA	84425813	84396755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407718_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.43	chr8	-	2994	21	ISM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	-14	4052	-14	-1	5prime_fragment	FALSE	canonical	3	231	junction_12	28.1539961639551	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCGTTTGTCTGCAACC	NA	False	NA	-16	True	NA	NA	NA	84425822	84397216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.44	chr8	-	4062	2	NIC	ENSMUSG00000057672.17	novel	1783	3	NA	NA	1	845	intron_retention	FALSE	canonical	3	271	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGGGACAAAGCTGAG	NA	False	NA	NA	False	NA	NA	NA	84425795	84415703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84419566_84425595
ES.33377.5	chr8	-	6644	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	21	-3	9	3	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAAAATGTGAGCATC	NA	False	NA	-6	True	AATAAA	-17	NA	84425787	84393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.6	chr8	-	7030	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	2	0	intron_retention	FALSE	canonical	3	231	junction_12	28.1539961639551	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGGAAAATGTGAGC	NA	False	NA	-9	True	AATAAA	-14	NA	84425806	84393164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.7	chr8	-	6811	20	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	19	-7	intron_retention	FALSE	canonical	3	231	junction_11	29.1449714853332	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTAAACACTGGAAAA	NA	False	NA	-16	True	AATAAA	-7	NA	84425777	84393171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398599_84398784_84398962_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.8	chr8	-	6099	20	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	31	-908	intron_retention	FALSE	canonical	3	231	junction_11	29.1318523260125	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGTCACCTTTTAAC	NA	False	NA	NA	False	NA	NA	NA	84425765	84394072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ES.33377.9	chr8	-	3843	6	NIC	ENSMUSG00000057672.17	novel	3070	9	NA	NA	-455	-912	intron_retention	FALSE	canonical	3	265	junction_3	27.5317997958724	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTTTGGTCACCTTT	NA	False	NA	NA	False	NA	NA	NA	84398864	84394076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784
ES.33378.1	chr8	-	175	1	Intergenic	novelGene_27175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	84437751	84437576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84437600_84437800
ES.33379.1	chr8	+	171	1	Intergenic	novelGene_27176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCCTGGTGGTGTACG	NA	False	NA	NA	False	NA	NA	NA	84441051	84441222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84441100_84441200
ES.3338.1	chr10	-	178	1	Intergenic	novelGene_2580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	80441712	80441534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80441500_80441700
ES.33380.1	chr8	+	156	1	Intergenic	novelGene_27177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGGGGGGCTGGGCGT	NA	False	NA	NA	False	AATAAA	-7	NA	84441226	84441382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84441200_84441400
ES.33381.1	chr8	+	1739	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	-80	-3	-80	3	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTGCCATCTTTTTTAT	NA	False	NA	102	True	NA	NA	NA	84441725	84449980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.10	chr8	+	6145	8	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	2216	junction_3	111.660198817663	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84441880	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.11	chr8	+	2141	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_4	983.714778496338	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.12	chr8	+	1869	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2216	junction_5	100.447885880081	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.13	chr8	+	1959	9	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2216	junction_5	98.4400198090187	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515
ES.33381.14	chr8	+	1075	8	NNC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	838.942093791159	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441897	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84449000_84449775
ES.33381.15	chr8	+	1487	11	NNC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	715.882120184601	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441897	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449668_84449761
ES.33381.16	chr8	+	1564	12	NNC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	916.249099984901	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441897	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84441967_84444748_84444822_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.17	chr8	+	1486	11	NNC	ENSMUSG00000005481.19	novel	1656	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	719.143407117106	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84441897	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84441967_84446015_84446228_84446440_84446573_84447184_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.18	chr8	+	1961	9	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	2216	junction_5	100.628027904754	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441897	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449664_84449753
ES.33381.2	chr8	+	1624	12	FSM	ENSMUSG00000005481.19	ENSMUST00000140521.8	1551	12	-69	-4	22	4	multi-exon	FALSE	canonical	3	43	junction_5	911.296107223839	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCCAGCCCCATCCC	NA	False	NA	30	True	AATAAA	-16	NA	84441827	84449908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.20	chr8	+	1581	12	NNC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	916.055088747306	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441902	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84441967_84444726_84444822_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.21	chr8	+	6302	9	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	2	6	intron_retention	FALSE	canonical	3	45	junction_4	787.767801687147	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCAGCCCCATCCCTT	NA	False	NA	32	True	AATAAA	-18	NA	84441902	84449910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.22	chr8	+	2315	10	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	3	-4	intron_retention	FALSE	canonical	3	45	junction_5	745.871368779786	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCAAACGTGCCATCT	NA	False	NA	95	True	NA	NA	NA	84441903	84449973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.24	chr8	+	1854	11	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	43	junction_4	936.26054600202	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441908	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.25	chr8	+	2903	5	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	38	0	intron_retention	FALSE	canonical	3	2336	junction_1	80.1853321998481	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441938	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446569_84447177_84447271_84447585_84449664_84449753
ES.33381.26	chr8	+	6149	8	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	-32	-1	intron_retention	FALSE	canonical	3	43	junction_3	834.019331249557	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84442144	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84446569_84447177_84447271_84447585_84447770_84448094_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.27	chr8	+	5357	11	ISM	ENSMUSG00000005481.19	ENSMUST00000140521.8	1551	12	248	-5	-32	5	3prime_fragment	FALSE	canonical	3	43	junction_4	948.062598144237	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCAGCCCCATCCCT	NA	False	NA	31	True	AATAAA	-17	NA	84442144	84449909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.28	chr8	+	1625	11	NNC	ENSMUSG00000005481.19	novel	1794	11	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	721.84769169126	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84442157	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84442363_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.29	chr8	+	1744	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	-18	68	-18	5	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCAGCCCCATCCCT	NA	False	NA	31	True	AATAAA	-17	NA	84442158	84449909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.30	chr8	+	2707	9	NIC	ENSMUSG00000005481.19	novel	1794	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	134	junction_1	758.500494396675	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84442160	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.31	chr8	+	5711	10	ISM	ENSMUSG00000005481.19	ENSMUST00000127505.8	1927	11	265	0	-15	0	3prime_fragment	FALSE	canonical	3	43	junction_4	988.342383320005	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	False	NA	25	True	AATAAA	-11	NA	84442161	84449903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.32	chr8	+	2105	10	NIC	ENSMUSG00000005481.19	novel	1794	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	134	junction_1	715.64361086911	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84442169	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.33	chr8	+	4340	9	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	1449	0	intron_retention	FALSE	canonical	3	43	junction_4	1037.36312350112	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	False	NA	25	True	AATAAA	-11	NA	84443625	84449903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449664_84449753
ES.33381.34	chr8	+	1039	8	NNC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	973	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	835.279227417456	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84447214	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449283_84449423_84449515_84449664_84449753
ES.33381.35	chr8	+	4069	2	NIC	ENSMUSG00000005481.19	novel	3836	12	NA	NA	3121	0	intron_retention	FALSE	canonical	3	2492	junction_1	0	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84449362	84453521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84449664_84449753
ES.33381.4	chr8	+	2298	7	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	2216	junction_4	114.408624383537	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84441861	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449664_84449753
ES.33381.5	chr8	+	1962	11	FSM	ENSMUSG00000005481.19	ENSMUST00000127505.8	1927	11	-34	-1	-34	0	multi-exon	FALSE	canonical	3	43	junction_5	947.235852362019	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441862	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.6	chr8	+	1407	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	759.93105600215	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441862	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.7	chr8	+	2048	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	-27	0	intron_retention	FALSE	canonical	3	43	junction_5	990.52804224269	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441869	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449664_84449753
ES.33381.8	chr8	+	2101	9	NIC	ENSMUSG00000005481.19	novel	1927	11	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	2216	junction_4	105.698199487976	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCATGGCTCCAGCCC	NA	False	NA	24	True	AATAAA	-10	NA	84441875	84449902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84441967_84446015_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33381.9	chr8	+	5558	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	-17	0	intron_retention	FALSE	canonical	3	2216	junction_4	99.6272063590743	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441879	84449904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ES.33382.1	chr8	-	4250	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	-104	-1279	49	1166	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCGGATGTAAGCTCT	NA	False	NA	NA	False	AGTAAA	-13	NA	84467906	84448713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.10	chr8	-	2527	15	NIC	ENSMUSG00000002885.15	novel	2980	18	NA	NA	31	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	52.7195119360518	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGAGAAGTTTGCTGG	NA	False	NA	1	True	ATTAAA	-31	NA	84467924	84449980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84467735
ES.33382.12	chr8	-	3170	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-170	0	-13	0	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	False	NA	-9	True	ATTAAA	-21	NA	84467968	84449990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.13	chr8	-	3003	20	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-1115	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_19	47.6327129844647	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCACGTTTGCTGGTGAG	NA	False	NA	-10	True	ATTAAA	-20	NA	84469070	84449991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735_84467884_84469016
ES.33382.15	chr8	-	2860	18	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_15	47.1593778628941	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467948	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460637_84460755_84460924_84460982_84467735
ES.33382.16	chr8	-	2962	16	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	2	0	intron_retention	FALSE	canonical	2	28	junction_12	45.3173501235699	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467810	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.17	chr8	-	4474	18	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	25	junction_14	43.6904018186222	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467810	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.18	chr8	-	2943	19	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_18	48.6081903884469	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467820	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84461040_84467735
ES.33382.19	chr8	-	2797	18	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	50.6226285274791	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467810	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.2	chr8	-	3281	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	-126	-155	31	44	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGGTTCTGAAGCAG	NA	False	NA	NA	False	AATAAA	-23	NA	84467924	84449835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.20	chr8	-	6569	17	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	49	0	intron_retention	FALSE	canonical	3	145	junction_15	22.806249143601	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467906	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84460755_84460924_84460982_84467735
ES.33382.21	chr8	-	2856	19	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-1116	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	57.7819710016845	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84469071	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735_84467884_84469016
ES.33382.22	chr8	-	2851	19	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-1112	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	48.9912123639423	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84469067	84449992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84469016
ES.33382.23	chr8	-	4543	17	NIC	ENSMUSG00000002885.15	novel	3000	20	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	25	junction_13	45.0275957053005	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATGGCACGTTTGC	NA	False	NA	-17	True	ATTAAA	-13	NA	84467816	84449998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.24	chr8	-	5853	14	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-5236	-6	intron_retention	FALSE	canonical	3	152	junction_10	22.5564380922229	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATGGCACGTTTGC	NA	False	NA	-17	True	ATTAAA	-13	NA	84460195	84449998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450532_84450607_84450707_84450820_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739
ES.33382.27	chr8	-	3030	14	NNC	ENSMUSG00000002885.15	novel	2986	18	NA	NA	-1096	-6	intron_retention	FALSE	canonical	1	1	junction_13	64.0984819213013	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATGGCACGTTTGC	NA	False	NA	-17	True	ATTAAA	-13	NA	84469051	84449998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84469016
ES.33382.28	chr8	-	3414	18	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-329	-7	intron_retention	FALSE	canonical	0	0	junction_5	50.1869860024871	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATGGCACGTTTG	NA	False	NA	-18	True	ATTAAA	-12	NA	84468284	84449999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84451159_84451246_84451317_84451397_84451628_84451788_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.29	chr8	-	2883	19	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	1433	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	49.183205002531	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGATGGCACGTTTG	NA	False	NA	-18	True	ATTAAA	-12	NA	84466365	84449999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84466275
ES.33382.3	chr8	-	3007	21	NNC	ENSMUSG00000002885.15	novel	3000	20	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.4048717101432	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGAGACATCGATT	NA	False	NA	NA	False	AATAAA	-33	NA	84467810	84449863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450284_84450415_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.30	chr8	-	1303	10	ISM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	179	4329	22	-32	5prime_fragment	FALSE	canonical	2	28	junction_6	49.0170038524048	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAACACTAAAAATA	NA	False	NA	NA	False	AATAAA	-4	NA	84467776	84454208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.31	chr8	-	1467	11	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	9	4216	5	-32	5prime_fragment	FALSE	canonical	3	115	junction_7	23.9768638483018	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAACACTAAAAATA	NA	False	NA	NA	False	AATAAA	-4	NA	84467793	84454208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.32	chr8	-	379	1	Intergenic	novelGene_27178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGCTAA	NA	False	NA	NA	False	AAAACA	-9	NA	84467575	84467196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84467200_84467600
ES.33382.4	chr8	-	2981	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	11	-6	11	6	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTTGGAACAATAAAAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	84467944	84449873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33382.5	chr8	-	3110	20	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	-1104	6	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_19	47.6327129844647	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTTGGAACAATAAAAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	84469059	84449873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735_84467884_84469016
ES.33382.8	chr8	-	2948	18	NNC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	61.6289263858624	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	AATAAA	-17	NA	84467928	84449879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451788_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460637_84460755_84460924_84460982_84467735
ES.33382.9	chr8	-	3047	18	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	115	junction_14	25.6080383141227	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	AATAAA	-17	NA	84467793	84449879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ES.33383.1	chr8	+	154	1	Intergenic	novelGene_27179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	84575650	84575804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84575600_84575800
ES.33384.1	chr8	-	174	1	Intergenic	novelGene_27180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAGAAAGCA	2002	False	NA	NA	False	NA	NA	NA	84585625	84585451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84585500_84585600
ES.33385.1	chr8	-	1631	2	Intergenic	novelGene_27181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	84589253	84587566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84588637_84588692
ES.33386.1	chr8	+	1181	3	Intergenic	novelGene_27183	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCCAGTAGGATGTTCT	3400	False	NA	NA	False	NA	NA	NA	84601313	84614939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84601523_84608991_84609055_84614030
ES.33387.1	chr8	-	1121	1	Intergenic	novelGene_27182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATTAAAAGTCCAGG	NA	False	NA	NA	False	AATAAA	-10	NA	84601574	84600453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84600500_84601600
ES.33388.1	chr8	-	5178	1	Intergenic	novelGene_27184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAGAAAAGTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	84618882	84613704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84613700_84618900
ES.33388.2	chr8	-	1952	2	Intergenic	novelGene_27185	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAACCATAAGA	NA	False	NA	NA	False	NA	NA	NA	84618018	84613716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84614187_84616536
ES.33389.1	chr8	+	8409	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-141	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	18.6006687279424	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTGATCAATTGGTGG	2931	False	NA	15	True	AATAAA	-28	NA	84626592	84668585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84654926_84655012_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.10	chr8	+	2227	5	ISM	ENSMUSG00000013033.17	ENSMUST00000132500.8	5719	22	-629	9602	1	333	5prime_fragment	FALSE	canonical	3	37	junction_4	17.1318416990118	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCCTTCTTCGAGTTC	3073	False	NA	NA	False	AAGAAA	-20	NA	84626734	84657014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092
ES.33389.11	chr8	+	6155	23	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	17.4732972189704	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCACTTGAAGCCACC	3073	False	NA	NA	False	NA	NA	NA	84626734	84666640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662730_84663819_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.12	chr8	+	6582	26	NNC	ENSMUSG00000013033.17	novel	5935	25	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4136328436662	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3075	False	NA	NA	False	NA	NA	NA	84626736	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84638818_84638935_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84654926_84655012_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.13	chr8	+	6202	23	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	17.5342050606076	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCACTTGAAGCCACC	3075	False	NA	NA	False	NA	NA	NA	84626736	84666640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664154_84664277_84664407_84664544_84664563_84664978
ES.33389.14	chr8	+	6408	24	NNC	ENSMUSG00000013033.17	novel	5935	25	NA	NA	8	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	24.7579587555018	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATGGAAAAGGAAAA	3080	False	NA	NA	False	NA	NA	NA	84626741	84666592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84650834_84650985_84654926_84655012_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664416_84664978
ES.33389.16	chr8	+	8279	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	49	-8	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.2305679791709	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTGGTGTGAT	3121	False	NA	5	True	AATAAA	-18	NA	84626782	84668575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.17	chr8	+	7848	23	NNC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	-228	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.0593906342111	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGTGATCAATTGG	3312	False	NA	12	True	AATAAA	-25	NA	84626973	84668582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649742_84656086_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84665080
ES.33389.18	chr8	+	5955	22	NNC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	-228	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	17.5062023346415	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	3312	False	NA	NA	False	NA	NA	NA	84626973	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664420_84664978
ES.33389.19	chr8	+	8105	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-208	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.6659450653541	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGAGTGGTGTGATCAA	3332	False	NA	8	True	AATAAA	-21	NA	84626993	84668578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84655431_84655621_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.2	chr8	+	6364	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	-135	1952	-135	-9	multi-exon	FALSE	canonical	3	37	junction_4	11.1024530086786	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	2937	False	NA	NA	False	NA	NA	NA	84626598	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.20	chr8	+	5609	24	NNC	ENSMUSG00000013033.17	novel	909	6	NA	NA	-10860	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7500199284756	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	97	False	NA	NA	False	NA	NA	NA	84638860	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84638935_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.21	chr8	+	6505	21	NNC	ENSMUSG00000013033.17	novel	909	6	NA	NA	2949	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.7838657194555	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	282	False	NA	NA	False	NA	NA	NA	84653728	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84655012_84655296_84655621_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659596_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.22	chr8	+	4762	17	NNC	ENSMUSG00000013033.17	novel	5152	21	NA	NA	-4845	-14	intron_retention	FALSE	non_canonical	0	0	junction_16	17.9391332009102	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	2914	False	NA	NA	False	NA	NA	NA	84656360	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664436_84664978
ES.33389.23	chr8	+	3853	18	NNC	ENSMUSG00000013033.17	novel	5152	21	NA	NA	-3492	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.5201317717944	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	4267	False	NA	NA	False	NA	NA	NA	84657713	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661172_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.24	chr8	+	3931	17	NIC	ENSMUSG00000013033.17	novel	5152	21	NA	NA	-3328	-14	intron_retention	FALSE	canonical	3	55	junction_2	8.29061969939522	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	4431	False	NA	NA	False	NA	NA	NA	84657877	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.25	chr8	+	5491	15	NNC	ENSMUSG00000013033.17	novel	5152	21	NA	NA	-2460	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	18.749149640581	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGATAGAGTGGTGTG	796	False	NA	3	True	AATAAA	-16	NA	84658745	84668573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664420_84664978
ES.33389.26	chr8	+	3266	13	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	8688	38	-1738	-14	3prime_fragment	FALSE	canonical	3	55	junction_1	7.51110289282917	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAAAGAC	1518	False	NA	NA	False	NA	NA	NA	84659467	84666602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.27	chr8	+	3675	1	NIC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	134	-24	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAATGGAAAAGGAAAA	2505	False	NA	NA	False	NA	NA	NA	84662917	84666592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84662900_84666600
ES.33389.28	chr8	+	3706	1	NIC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	589	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGAGTGGTGTGATCAA	321	False	NA	8	True	AATAAA	-21	NA	84664872	84668578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84664900_84668600
ES.33389.29	chr8	+	1927	1	ISM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	38349	1574	799	369	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGAGTTCCTGCTT	531	False	NA	NA	False	NA	NA	NA	84665082	84667009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84665100_84667000
ES.33389.3	chr8	+	6242	23	NNC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.6478475018929	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3069	False	NA	NA	False	NA	NA	NA	84626730	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649742_84656086_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.4	chr8	+	6317	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	18.6006687279424	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3069	False	NA	NA	False	NA	NA	NA	84626730	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84654926_84655012_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.5	chr8	+	8179	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	-3	5	-3	-5	multi-exon	FALSE	canonical	3	37	junction_4	11.1024530086786	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGAGTGGTGTGATCAA	3069	False	NA	8	True	AATAAA	-21	NA	84626730	84668578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.6	chr8	+	6386	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.2305679791709	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3070	False	NA	NA	False	NA	NA	NA	84626731	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.7	chr8	+	6396	24	NNC	ENSMUSG00000013033.17	novel	5643	24	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	22.4148883818774	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3070	False	NA	NA	False	NA	NA	NA	84626731	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649742_84656086_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ES.33389.8	chr8	+	2871	8	NNC	ENSMUSG00000013033.17	novel	5719	22	NA	NA	-1	329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	32.9563719025561	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTCCCTTCTTCGA	3071	False	NA	NA	False	AAGAAA	-16	NA	84626732	84657010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84640067_84640223_84642035_84642198_84645448_84645663_84649627_84649738_84654926_84655012_84655214_84655621_84656092
ES.33389.9	chr8	+	6230	22	NNC	ENSMUSG00000013033.17	novel	8181	23	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.2946077085331	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAATCTCATCACTT	3072	False	NA	NA	False	NA	NA	NA	84626733	84666631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649742_84656086_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664416_84664978
ES.3339.1	chr10	+	2508	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-214	19	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATAGGACAATTCAAGT	NA	False	NA	36	True	NA	NA	NA	80458457	80476602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.10	chr10	+	2808	10	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-147	-28	intron_retention	FALSE	canonical	3	21	junction_5	213.254151972085	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458524	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474544_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
ES.3339.13	chr10	+	6200	8	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-142	-29	intron_retention	FALSE	canonical	3	537	junction_2	71.4759842641611	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458529	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601
ES.3339.14	chr10	+	2243	11	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-142	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	211.007014101427	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458529	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80474062_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.15	chr10	+	2540	10	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-141	-29	intron_retention	FALSE	canonical	3	537	junction_4	61.7637873846704	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458530	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.17	chr10	+	2006	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-141	2	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAGGCCATTTTCTC	NA	False	NA	18	True	CATAAA	-18	NA	80458530	80476173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.18	chr10	+	5449	8	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-140	-29	intron_retention	TRUE	non_canonical	0	0	junction_2	311.488329784338	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458531	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458890_80470047_80470976_80471863_80473763_80473843_80474144_80474227_80474626_80474713_80474799_80474918_80475709_80475855
ES.3339.2	chr10	+	2500	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-180	28	-180	-28	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458491	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.20	chr10	+	2292	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-137	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	211.92602482942	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458534	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475601_80475709_80475855
ES.3339.21	chr10	+	2427	12	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	202.75980171149	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458535	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475078_80475370_80475498_80475601_80475709_80475855
ES.3339.23	chr10	+	2522	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	-28	intron_retention	FALSE	canonical	3	537	junction_4	60.7224011382949	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458535	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601
ES.3339.24	chr10	+	2446	12	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	265.19214926739	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAGAATGTTGGCCTG	NA	False	NA	7	True	GGGGCT	-34	NA	80458535	80476573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475370_80475498_80475601_80475711_80475855
ES.3339.25	chr10	+	2389	12	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-135	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	260.425176830645	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458536	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474206_80474463_80474544_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.29	chr10	+	2209	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-119	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	210.862135055111	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458552	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.3	chr10	+	2739	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-154	-28	intron_retention	FALSE	canonical	3	537	junction_4	60.2514730110393	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458517	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
ES.3339.30	chr10	+	2608	10	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-119	-29	intron_retention	FALSE	canonical	3	537	junction_4	63.9756898273781	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458552	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413
ES.3339.33	chr10	+	2881	9	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-112	-29	intron_retention	FALSE	canonical	3	656	junction_3	41.9357767902301	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458559	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475709_80475855
ES.3339.34	chr10	+	2861	9	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-112	-29	intron_retention	FALSE	canonical	3	656	junction_3	41.5870698054095	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458559	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
ES.3339.35	chr10	+	2219	13	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-109	-29	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_12	184.078259323462	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458562	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855_80475913_80476040
ES.3339.36	chr10	+	2443	11	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-109	-29	intron_retention	FALSE	canonical	2	2	junction_8	210.490593614062	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458562	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475083_80475413_80475498_80475601_80475709_80475855
ES.3339.37	chr10	+	2446	11	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-109	-29	intron_retention	FALSE	canonical	3	21	junction_6	203.173423458877	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458562	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474544_80474626_80474713_80474799_80474918_80475068_80475413_80475709_80475855
ES.3339.38	chr10	+	2614	9	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-106	-28	intron_retention	FALSE	canonical	3	651	junction_7	43.3294068733926	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458565	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475709_80475855
ES.3339.39	chr10	+	2069	10	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-82	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	214.013556741473	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458589	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474608_80475413_80475498_80475601_80475709_80475855
ES.3339.4	chr10	+	2879	10	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-154	0	intron_retention	FALSE	canonical	3	537	junction_4	63.442012017975	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458517	80476583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475709_80475855
ES.3339.40	chr10	+	1616	7	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-166	2	intron_retention	FALSE	canonical	3	664	junction_1	46.8069320602076	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAGGCCATTTTCTC	NA	False	NA	18	True	CATAAA	-18	NA	80473937	80476173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
ES.3339.6	chr10	+	2364	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-153	2	intron_retention	FALSE	canonical	3	537	junction_4	60.2514730110393	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAGGCCATTTTCTC	NA	False	NA	18	True	CATAAA	-18	NA	80458518	80476173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
ES.3339.7	chr10	+	2095	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	-149	402	-149	2	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAAAGGCCATTTTCTC	NA	False	NA	18	True	CATAAA	-18	NA	80458522	80476173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.8	chr10	+	2470	11	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-149	-29	intron_retention	FALSE	canonical	3	21	junction_6	194.873523086129	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	False	NA	-20	True	GGGGCT	-7	NA	80458522	80476546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474544_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.3339.9	chr10	+	2372	12	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-147	-28	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	198.036393683435	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAGAAAA	NA	False	NA	-19	True	GGGGCT	-8	NA	80458524	80476547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80474008_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ES.33390.1	chr8	-	2845	5	Antisense	novelGene_ENSMUSG00000013033.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	9899	False	NA	NA	False	NA	NA	NA	84652951	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84627551_84642032_84642196_84645446_84645661_84649625_84649738_84650834
ES.33390.10	chr8	-	3731	21	Fusion	ENSMUSG00002075713.1_ENSMUSG00002076814.1_ENSMUSG00000074219.4	novel	609	4	NA	NA	-3619	28726	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGTATAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-20	NA	84664305	84627345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84627551_84642032_84642196_84645446_84645661_84649625_84649738_84656092_84656891_84657583_84657904_84658239_84658344_84658594_84658789_84659006_84659038_84659134_84659319_84659466_84659591_84660053_84660268_84660503_84660677_84661172_84661264_84661344_84661568_84661692_84661759_84662169_84662260_84662645_84662816_84663823_84663950_84664085_84664185_84664275
ES.33390.12	chr8	-	111	1	Antisense	novelGene_ENSMUSG00000013033.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAGAAAA	9900	False	NA	NA	False	AAAACA	-19	NA	84652950	84652839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84652800_84653000
ES.33390.13	chr8	-	3658	4	NNC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	13	2	intron_retention	TRUE	non_canonical	0	0	junction_1	4.18993502999218	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCCTCTAGCCTTAAC	6083	False	NA	NA	False	AATAAA	-17	NA	84681821	84658955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84661946_84661987_84662458_84662696_84662805_84681731
ES.33390.14	chr8	-	2977	5	NNC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	-9	2	intron_retention	FALSE	canonical	1	3	junction_2	2.73861278752583	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCCTCTAGCCTTAAC	6061	False	NA	NA	False	AATAAA	-17	NA	84681843	84658955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84661236_84661487_84661868_84662360_84662458_84662696_84662805_84681731
ES.33390.15	chr8	-	2586	4	NIC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	4.18993502999218	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTCCTCTAGCCTTA	6070	False	NA	NA	False	AATAAA	-15	NA	84681834	84658957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84661236_84662360_84662458_84662696_84662805_84681731
ES.33390.16	chr8	-	2465	5	NIC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_1	2.12132034355964	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTCCTCTAGCCTTA	6072	False	NA	NA	False	AATAAA	-15	NA	84681832	84658957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84660445_84660667_84661236_84661487_84661700_84662360_84662458_84681731
ES.33390.17	chr8	-	2123	5	NNC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	1.73205080756888	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTCCTCTAGCCTTA	6069	False	NA	NA	False	AATAAA	-15	NA	84681835	84658957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84659777_84660354_84661232_84661487_84661714_84662360_84662458_84681731
ES.33390.18	chr8	-	1540	1	NIC	ENSMUSG00000074219.4	novel	2798	5	NA	NA	3	-19115	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATATATCCTTATTATT	6073	False	NA	NA	False	NA	NA	NA	84681831	84680291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84680300_84681800
ES.33390.2	chr8	-	3942	4	Antisense	novelGene_ENSMUSG00000013033.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	9899	False	NA	NA	False	NA	NA	NA	84652951	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84627551_84642032_84642196_84645446_84645661_84649625
ES.33390.3	chr8	-	2648	7	Genic_Genomic	ENSMUSG00002076814.1_ENSMUSG00002075713.1	novel	143	1	NA	NA	-435	28760	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	12	True	NA	NA	False	NA	NA	NA	84656894	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_84627552_84640065_84640223_84642035_84642196_84645446_84645661_84649625_84649738_84654926_84655009_84655211
ES.33390.4	chr8	-	3885	21	Fusion	ENSMUSG00002075713.1_ENSMUSG00002076814.1_ENSMUSG00000074219.4	novel	496	7	NA	NA	-3619	28760	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	NA	False	NA	NA	False	NA	NA	NA	84664305	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84627551_84642032_84642196_84645446_84645661_84649625_84649738_84656092_84656891_84657583_84657904_84658239_84658344_84658594_84658789_84659006_84659038_84659134_84659319_84659466_84659591_84660053_84660268_84660503_84660682_84661058_84661264_84661344_84661568_84661692_84661759_84662169_84662260_84662645_84662816_84663823_84663950_84664084_84664185_84664275
ES.33390.5	chr8	-	1944	4	Antisense	novelGene_ENSMUSG00000013033.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	5954	False	NA	NA	False	NA	NA	NA	84650952	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84627551_84642032_84642197_84645446_84645661_84649625
ES.33390.6	chr8	-	1699	6	Genic_Genomic	ENSMUSG00002076814.1_ENSMUSG00002075713.1	novel	143	1	NA	NA	-435	28760	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	12	True	NA	NA	False	NA	NA	NA	84656894	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_84627552_84640065_84640223_84642035_84642196_84645446_84645661_84649625_84649743_84656083
ES.33390.7	chr8	-	1475	6	Antisense	novelGene_ENSMUSG00000013033.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGATCGCGGCGCTCCGG	9876	False	NA	NA	False	NA	NA	NA	84653173	84627311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84627551_84642032_84642194_84645445_84645661_84649625_84649738_84650519_84650984_84652889
ES.33390.9	chr8	-	3856	21	Fusion	ENSMUSG00002075713.1_ENSMUSG00002076814.1_ENSMUSG00000074219.4	novel	496	7	NA	NA	-3619	28733	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	TTTAAA	-27	NA	84664305	84627338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84627551_84642032_84642196_84645446_84645661_84649625_84649738_84656092_84656891_84657583_84657904_84658239_84658344_84658594_84658789_84659006_84659038_84659134_84659319_84659466_84659591_84660053_84660268_84660503_84660682_84661058_84661264_84661344_84661568_84661692_84661759_84662169_84662260_84662645_84662816_84663823_84663950_84664084_84664189_84664281
ES.33391.1	chr8	+	1641	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	146	1	-61	-1	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTGCTTTTTTCTCT	5862	False	NA	22	True	AATAAA	-15	NA	84682281	84696825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ES.33391.2	chr8	+	3169	2	NNC	ENSMUSG00000005470.9	novel	369	3	NA	NA	-43	-8785	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGCCATCTCCCCAGA	5880	False	NA	NA	False	NA	NA	NA	84682299	84685691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84685147_84685369
ES.33391.3	chr8	+	2710	3	ISM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	177	24	-30	-24	intron_retention	FALSE	canonical	3	543	junction_2	1	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAAAAGCACTTCATC	5893	False	NA	-1	True	ATTAAA	-31	NA	84682312	84696802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84682567_84691659_84691776_84694462
ES.33391.4	chr8	+	1461	4	NNC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	-23	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.878955239771	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTTTGGTTGTCTTA	5900	False	NA	-20	True	ATTAAA	-12	NA	84682319	84696783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84682467_84691659_84691776_84694462_84694640_84695762
ES.33391.5	chr8	+	1754	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	186	-152	-21	152	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGTTGTTTTAATGTT	5902	False	NA	NA	False	NA	NA	NA	84682321	84696978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ES.33391.6	chr8	+	1362	3	NIC	ENSMUSG00000005470.9	novel	369	3	NA	NA	0	-42	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	272.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGGTTGTCTTAA	5923	False	NA	-19	True	ATTAAA	-13	NA	84682342	84696784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84682567_84691659_84691776_84695762
ES.33391.7	chr8	+	1462	3	NIC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	267	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTTGCTTTTTTCTCT	5925	False	NA	22	True	AATAAA	-15	NA	84682344	84696825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84682567_84694462_84694640_84695762
ES.33391.8	chr8	+	5332	3	NNC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	-1762	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	275.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGTTTTGCTTTTTTCT	600	False	NA	20	True	AATAAA	-13	NA	84689913	84696823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84692571_84693025_84694640_84695762
ES.33392.1	chr8	-	177	1	Intergenic	novelGene_27186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2546	False	NA	NA	False	NA	NA	NA	84685358	84685181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84685200_84685400
ES.33393.1	chr8	+	2341	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	-64	-1	-64	1	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGCTGGTTTTCCCGAC	388	False	NA	NA	False	AATAAA	-20	NA	84699557	84723073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33393.2	chr8	+	2235	11	NNC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	-25	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.502296971517	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	427	False	NA	NA	False	AATAAA	-11	NA	84699596	84723064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84699739_84699796_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33393.4	chr8	+	2417	9	NIC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	-24	-8	intron_retention	FALSE	canonical	3	651	junction_7	29.6286917530964	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	428	False	NA	NA	False	AATAAA	-11	NA	84699597	84723064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717615_84721423_84721589_84721920
ES.33393.5	chr8	+	2215	9	NIC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	-9	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	235.697369522869	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	443	False	NA	NA	False	AATAAA	-11	NA	84699612	84723064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84699862_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33393.6	chr8	+	2229	11	NNC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	-1	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	215.502296971517	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	451	False	NA	NA	False	AATAAA	-11	NA	84699620	84723064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84699775_84699814_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33393.7	chr8	+	5651	8	NIC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	25	-9	intron_retention	FALSE	canonical	3	651	junction_6	30.5707610073977	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAAAGTGTCGCTGG	477	False	NA	NA	False	AATAAA	-10	NA	84699646	84723063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33393.8	chr8	+	1922	9	NIC	ENSMUSG00000005469.11	novel	2276	10	NA	NA	223	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	239.376795032434	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	675	False	NA	NA	False	AATAAA	-11	NA	84699844	84723064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84721423_84721589_84721920
ES.33393.9	chr8	+	2068	10	FSM	ENSMUSG00000005469.11	ENSMUST00000211558.2	1399	10	171	-840	171	-9	multi-exon	FALSE	canonical	1	5	junction_1	224.880269927064	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAAAAGTGTCGCTGG	279	False	NA	NA	False	AATAAA	-10	NA	84703682	84723063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84703724_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ES.33394.1	chr8	-	312	1	Intergenic	novelGene_27187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTC	9484	False	NA	NA	False	NA	NA	NA	84712319	84712007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84712000_84712300
ES.33394.2	chr8	-	178	1	Intergenic	novelGene_27188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	9481	False	NA	NA	False	NA	NA	NA	84712322	84712144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84712100_84712300
ES.33395.1	chr8	+	2195	6	NNC	ENSMUSG00000079003.4	novel	2265	5	NA	NA	-259	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.130145976909	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTCATTTTC	809	False	NA	19	True	AATAAA	-6	NA	84723870	84727034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84724153_84724477_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.2	chr8	+	1310	5	NNC	ENSMUSG00000079003.4	novel	2265	5	NA	NA	-216	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.188084650136	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTCATTTTC	852	False	NA	19	True	AATAAA	-6	NA	84723913	84727034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84724028_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.3	chr8	+	2467	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	-196	-6	-196	6	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTTCTGTATGGAGG	872	False	NA	29	True	AATAAA	-16	NA	84723933	84727044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.4	chr8	+	1774	6	NNC	ENSMUSG00000079003.4	novel	2265	5	NA	NA	113	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.130145976909	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTCATTTTCTG	1181	False	NA	21	True	AATAAA	-8	NA	84724242	84727036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84724280_84724655_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.5	chr8	+	1942	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	129	194	129	-194	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTGGTGGTGGTTTTT	1197	False	NA	NA	False	NA	NA	NA	84724258	84726844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.6	chr8	+	5329	5	FSM	ENSMUSG00000079003.4_ENSMUSG00000046408.16	ENSMUST00000095228.5	2265	5	278	-3342	278	462	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCCTCTTCAGATTAGG	1346	False	NA	NA	False	NA	NA	NA	84724407	84730380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ES.33395.7	chr8	+	1357	5	NIC	ENSMUSG00000046408.16	novel	1291	6	NA	NA	14	1	intron_retention	FALSE	canonical	2	5	junction_1	0.82915619758885	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCTTGTGAGCACC	5083	False	NA	NA	False	AATAAA	-17	NA	84728144	84731400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84728535_84729486_84729632_84729744_84730111_84730553_84730689_84731079
ES.33395.8	chr8	+	1073	2	ISM	ENSMUSG00000046408.16	ENSMUST00000060357.15	1291	6	1749	4	922	-4	intron_retention	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTCTGTGTCTTGTGA	6818	False	NA	NA	False	AATAAA	-12	NA	84729879	84731395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84730111_84730553
ES.33396.1	chr8	-	459	1	Antisense	novelGene_ENSMUSG00000079003.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGAGAGAGGAGAGCGCG	3066	False	NA	NA	False	NA	NA	NA	84724572	84724113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84724100_84724600
ES.33397.1	chr8	-	2801	3	NNC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	397	2407	intron_retention	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAATGATTCAAGTG	8677	False	NA	NA	False	NA	NA	NA	84737643	84734443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84734708_84734900_84735986_84736191
ES.33397.3	chr8	-	1415	5	NNC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	-563	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.2279868134194	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCTTCAGTGCAAGC	6957	False	NA	-16	True	AATAAA	-15	NA	84739363	84736857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84737122_84737339_84737402_84737769_84738400_84738742_84738934_84739095
ES.33397.6	chr8	-	2501	1	FSM	ENSMUSG00000080665.3	ENSMUST00000117015.3	119	1	-1101	-1281	-1101	1281	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTACCTGGGCTTCAGTG	6957	False	NA	-21	True	AATAAA	-10	NA	84739363	84736862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84736900_84739400
ES.33398.1	chr8	+	2700	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	-240	-8	-240	8	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84747859	84756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ES.33398.2	chr8	+	4288	6	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	-23	20	intron_retention	FALSE	canonical	3	17	junction_1	32.9460164511584	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTTTTATTTATTTA	NA	False	NA	31	True	ATTAAA	-44	NA	84748076	84756944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84748158_84750980_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ES.33398.3	chr8	+	2497	7	NNC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	-4	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.9832008528397	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTTTTATTTATTTA	NA	False	NA	31	True	ATTAAA	-44	NA	84748095	84756944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84748158_84750980_84751030_84752801_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ES.33398.4	chr8	+	4095	2	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	0	8	intron_retention	FALSE	canonical	3	101	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84752703	84756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84754801_84754934
ES.33398.5	chr8	+	2579	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	1	8	intron_retention	FALSE	canonical	3	95	junction_1	4.10960933531265	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84752704	84756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84752904_84753377_84753714_84754754_84754801_84754934
ES.33398.6	chr8	+	2386	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	1	8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	44.8503685108111	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84752704	84756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84752904_84753377_84753521_84754754_84754801_84754934
ES.33398.7	chr8	+	2879	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	67	8	intron_retention	FALSE	canonical	3	94	junction_1	4.54606056566195	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTAATTTATT	NA	False	NA	19	True	ATTAAA	-32	NA	84752770	84756932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84753521_84753628_84753714_84754754_84754801_84754934
ES.33399.1	chr8	-	2661	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	4	-1	4	1	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAGAGTGCCTTAACA	5263	False	NA	NA	False	NA	NA	NA	84769214	84756921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
ES.33399.2	chr8	-	3844	6	NIC	ENSMUSG00000005465.10	novel	2664	14	NA	NA	4	-3415	intron_retention	FALSE	canonical	3	20	junction_5	4.79165942028438	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACAGTGATGGACACCTG	5263	False	NA	NA	False	AGTAAA	-25	NA	84769214	84760395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84760739_84760820_84760923_84762713_84763176_84765924_84765999_84766106_84768834_84769078
ES.334.1	chr1	-	186	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACACTCAATGTC	NA	False	NA	NA	False	NA	NA	NA	38062081	38061895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_38061900_38062100
ES.3340.1	chr10	-	172	1	Intergenic	novelGene_2581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80462944	80462772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80462800_80462900
ES.33400.1	chr8	-	1076	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	-174	-268	-174	268	multi-exon	FALSE	canonical	3	87	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCACGCGTGCGTATCA	2674	False	NA	-3	True	AATAAA	-16	NA	84771803	84769289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84769961_84771398
ES.33401.1	chr8	-	181	1	Intergenic	novelGene_27189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGAG	9582	False	NA	NA	False	NA	NA	NA	84785737	84785556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84785600_84785700
ES.33402.1	chr8	+	4206	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	-24	-10	-22	10	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGAGCAGGGTTAGGTG	NA	False	NA	31	True	AATAAA	-27	NA	84793440	84823631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.10	chr8	+	3622	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	17	533	17	0	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGTTCTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	84793481	84823088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.11	chr8	+	4234	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	17	6	intron_retention	FALSE	canonical	3	25	junction_6	9.15638221024305	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACGAGAGCAGGGTTA	NA	False	NA	27	True	AATAAA	-23	NA	84793481	84823627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.12	chr8	+	4460	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	17	-305	17	305	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTCGGGCCACCAGAG	NA	False	NA	NA	False	AATAAA	-10	NA	84793481	84823926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.13	chr8	+	3892	19	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	27	8	intron_retention	FALSE	canonical	1	8	junction_1	12.0289003838441	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGAGAGCAGGGTTAGG	NA	False	NA	29	True	AATAAA	-25	NA	84793491	84823629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822303_84822425
ES.33402.14	chr8	+	4441	22	NNC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	28	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.5765973655201	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTCTACTGATGACG	NA	False	NA	15	True	AATAAA	-11	NA	84793492	84823615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84811194_84811498_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.15	chr8	+	4218	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	28	-4	intron_retention	FALSE	canonical	3	25	junction_6	9.20526165327543	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTACTGATGACGAG	NA	False	NA	17	True	AATAAA	-13	NA	84793492	84823617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822303_84822425
ES.33402.16	chr8	+	1877	6	FSM	ENSMUSG00000031706.8	ENSMUST00000209362.2	1892	6	28	-13	28	13	multi-exon	FALSE	canonical	3	30	junction_2	8.43800924389159	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGCTGGGGTGTA	NA	False	NA	NA	False	AATAAA	-6	NA	84793492	84810327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276
ES.33402.18	chr8	+	3588	18	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	30	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.2383599004863	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACGAGAGCAGGGTTAG	NA	False	NA	28	True	AATAAA	-24	NA	84793494	84823628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.2	chr8	+	3840	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGATGACGAGAGCAGGG	NA	False	NA	24	True	AATAAA	-20	NA	84793460	84823624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.20	chr8	+	3803	20	NNC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	30	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.9838324689334	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACGAGAGCAGGGTTA	NA	False	NA	27	True	AATAAA	-23	NA	84793494	84823627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821584_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.21	chr8	+	4111	21	NNC	ENSMUSG00000031706.8	novel	3677	21	NA	NA	307	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1049608927307	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAGAGCAGGGTTAGGTG	NA	False	NA	31	True	AATAAA	-27	NA	84793771	84823631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84793914_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.22	chr8	+	4102	12	NNC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	7078	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	15.482327968973	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTCTACTGATGACG	NA	False	NA	15	True	AATAAA	-11	NA	84800542	84823615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84800699_84806491_84806602_84806753_84806804_84817605_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.23	chr8	+	2366	11	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	23353	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	14.2073924419649	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGACGAGAGCAGGGT	NA	False	NA	25	True	AATAAA	-21	NA	84816817	84823625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84822024_84822179_84822256_84822303_84822425
ES.33402.24	chr8	+	4240	7	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	24208	305	intron_retention	FALSE	canonical	3	41	junction_2	6.97614984548545	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTCGGGCCACCAGAG	NA	False	NA	NA	False	AATAAA	-10	NA	84817672	84823926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.4	chr8	+	3997	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	2	173	2	-173	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAATCCCTATTTTGTG	NA	False	NA	NA	False	AAAAAG	-18	NA	84793466	84823448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.5	chr8	+	3907	19	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	5	6	intron_retention	FALSE	canonical	1	8	junction_1	11.9855880534772	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACGAGAGCAGGGTTA	NA	False	NA	27	True	AATAAA	-23	NA	84793469	84823627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.6	chr8	+	3295	20	NIC	ENSMUSG00000031706.8	novel	3677	21	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGAGCTGGGTTCTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	84793469	84823088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.7	chr8	+	3379	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	6	787	6	-254	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACCTGCCTAGGTGTC	NA	False	NA	NA	False	GGGGCT	-45	NA	84793470	84822834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.8	chr8	+	4570	21	NNC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	10	-6	intron_retention	FALSE	canonical	0	0	junction_7	15.7689568456509	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTCTACTGATGACG	NA	False	NA	15	True	AATAAA	-11	NA	84793474	84823615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84811194_84811525_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33402.9	chr8	+	4498	22	NNC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	12	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.456911068297	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGAGAGCAGGGTTAGG	NA	False	NA	29	True	AATAAA	-25	NA	84793476	84823629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84811194_84811525_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ES.33403.1	chr8	-	3735	21	NNC	ENSMUSG00000056753.4	novel	1849	2	NA	NA	-29377	-1716	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGCGTGGGGGTGGGGGG	8955	False	NA	NA	False	NA	NA	NA	84823293	84793580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84793676_84800354_84800697_84806489_84806600_84806751_84806835_84807740_84807850_84809274_84809389_84810708_84810808_84812205_84812297_84814334_84814702_84816739_84816918_84817574_84817697_84817992_84818104_84819157_84819281_84819406_84819519_84819600_84819754_84819829_84819928_84821353_84821502_84821574_84821782_84822019_84822177_84822254_84822301_84822423
ES.33403.2	chr8	-	1660	1	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGCCTTGGTGCTTCTTC	4109	False	NA	NA	False	ATTAAA	-16	NA	84811520	84809860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84809900_84811500
ES.33403.3	chr8	-	3504	3	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCCCCAAAATGGGGTT	8956	False	NA	NA	False	NA	NA	NA	84823292	84818281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84819754_84819829_84819929_84821359
ES.33403.4	chr8	-	3149	5	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCCCCAAAATGGGGTT	8955	False	NA	NA	False	NA	NA	NA	84823293	84818281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84819754_84819829_84819928_84821353_84821782_84822019_84822301_84822423
ES.33403.5	chr8	-	1970	9	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	9746	False	NA	NA	False	NA	NA	NA	84822502	84818307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84819276_84819401_84819518_84819600_84819753_84819829_84819928_84821353_84821503_84821577_84821782_84822019_84822179_84822255_84822301_84822423
ES.33403.6	chr8	-	2963	7	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTGTCTGAAAAAAAAAAC	8955	False	NA	NA	False	NA	NA	NA	84823293	84818316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84819754_84819829_84819928_84821353_84821502_84821574_84821782_84822019_84822177_84822254_84822301_84822423
ES.33404.1	chr8	-	2222	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	-21	-2	-16	2	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCTGTTCTGTCC	9241	False	NA	-1	True	ACTAAA	-19	NA	84831413	84823698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ES.33404.10	chr8	-	2671	12	NIC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	169	junction_7	21.9424491427043	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9262	False	NA	-6	True	ACTAAA	-14	NA	84831392	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
ES.33404.11	chr8	-	3518	12	ISM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	241	3	240	-3	3prime_fragment	FALSE	canonical	3	169	junction_7	21.829163902775	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9503	False	NA	-6	True	ACTAAA	-14	NA	84831151	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584
ES.33404.12	chr8	-	3499	5	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	3444	-3	intron_retention	TRUE	non_canonical	0	0	junction_4	100.661251234027	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	7588	False	NA	-6	True	ACTAAA	-14	NA	84827947	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84825120_84825207_84827427_84827842
ES.33404.13	chr8	-	1385	6	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	5804	-3	intron_retention	FALSE	canonical	0	0	junction_1	82.9443186722273	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9948	False	NA	-6	True	ACTAAA	-14	NA	84825587	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824476_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386
ES.33404.15	chr8	-	2895	11	NIC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	2	-4	intron_retention	FALSE	canonical	3	169	junction_6	21.5025579873651	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCCTGGTGTCCTGTT	9265	False	NA	-7	True	ACTAAA	-13	NA	84831389	84823704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
ES.33404.16	chr8	-	2229	13	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	112	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.5252646991074	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCCTGGTGTCCTGTT	9375	False	NA	-7	True	ACTAAA	-13	NA	84831279	84823704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824947_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ES.33404.17	chr8	-	5407	8	NNC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	78.3224626991855	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	9262	False	NA	-8	True	ACTAAA	-12	NA	84831392	84823705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84827427_84827652_84828476_84828560_84829683_84831245
ES.33404.18	chr8	-	3085	3	NIC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	4355	-5	intron_retention	FALSE	canonical	3	210	junction_2	3	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	8499	False	NA	-8	True	ACTAAA	-12	NA	84827036	84823705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84824670_84824827_84825120_84825207
ES.33404.19	chr8	-	4551	6	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	2419	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	91.6436577183604	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	9684	False	NA	-8	True	ACTAAA	-12	NA	84828972	84823705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84825120_84825207_84827445_84827746_84828476_84828560
ES.33404.2	chr8	-	3769	3	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	3758	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	105	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGGTGTCCTGTTCT	7902	False	NA	-5	True	ACTAAA	-15	NA	84827633	84823702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84825120_84825207_84827429_84827502
ES.33404.20	chr8	-	4508	11	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	2	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	87.9352034170616	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGCCTGGTGTCCTGT	9259	False	NA	-8	True	ACTAAA	-12	NA	84831395	84823705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84827434_84827735_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84831245
ES.33404.3	chr8	-	2291	12	NIC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	169	junction_6	21.1695243293414	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9254	False	NA	-6	True	ACTAAA	-14	NA	84831400	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ES.33404.4	chr8	-	4156	7	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	2738	-3	intron_retention	TRUE	canonical	0	0	junction_5	84.2707277502429	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	10003	False	NA	-6	True	ACTAAA	-14	NA	84828653	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84827451_84827753_84828476_84828560
ES.33404.5	chr8	-	5516	7	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	-17	-3	intron_retention	TRUE	non_canonical	0	0	junction_5	83.764882591427	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9240	False	NA	-6	True	ACTAAA	-14	NA	84831414	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84827427_84827652_84829683_84831245
ES.33404.6	chr8	-	2304	13	FSM	ENSMUSG00000037103.9	ENSMUST00000041367.9	2312	13	5	3	5	-3	multi-exon	FALSE	canonical	3	17	junction_1	56.6688112339289	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9268	False	NA	-6	True	ACTAAA	-14	NA	84831386	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ES.33404.7	chr8	-	5176	10	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	-4	-3	intron_retention	TRUE	non_canonical	0	0	junction_5	69.745215332153	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9253	False	NA	-6	True	ACTAAA	-14	NA	84831401	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84827445_84827746_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
ES.33404.8	chr8	-	4439	9	NNC	ENSMUSG00000037103.9	novel	2312	13	NA	NA	1894	-3	intron_retention	TRUE	non_canonical	0	0	junction_6	73.6383689050756	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	9159	False	NA	-6	True	ACTAAA	-14	NA	84829497	84823703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84827434_84827735_84828476_84828560_84828900_84829374
ES.33405.1	chr8	-	177	1	Intergenic	novelGene_27190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGTAATATGCCT	9302	False	NA	NA	False	NA	NA	NA	84846372	84846195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84846200_84846400
ES.33406.1	chr8	-	3359	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-5	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	21.4284786724755	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTTTTTGTCCTT	NA	False	NA	-2	True	AATGAA	-23	NA	84874531	84859457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.10	chr8	-	3411	29	NNC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.5878840434794	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874546	84859467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865429_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.11	chr8	-	3727	27	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	1	-2	intron_retention	FALSE	canonical	3	61	junction_15	12.688402662675	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874525	84859467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.12	chr8	-	3331	27	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	1	-2	intron_retention	FALSE	canonical	2	5	junction_3	21.1497898208813	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874493	84859467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.13	chr8	-	2938	12	NIC	ENSMUSG00000036686.17	novel	3262	28	NA	NA	-1844	-3	intron_retention	FALSE	canonical	3	73	junction_2	13.1639377162894	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84865261	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84863485_84863558_84863618_84863698_84863822_84865089
ES.33406.14	chr8	-	3724	27	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	0	-3	intron_retention	FALSE	canonical	3	61	junction_17	12.0835968821153	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874494	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867307_84867391_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.16	chr8	-	5910	19	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	636	-3	intron_retention	FALSE	canonical	3	61	junction_8	13.5624982221083	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84873858	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84861167_84861250_84861791_84862233_84862286_84862386_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942
ES.33406.17	chr8	-	3503	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	8	-3	intron_retention	FALSE	canonical	3	61	junction_17	12.3576115173712	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874518	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.18	chr8	-	4719	25	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	1	-3	intron_retention	FALSE	canonical	3	61	junction_14	12.9351346468962	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874493	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.19	chr8	-	3513	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	61	junction_17	12.9939312625958	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874534	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870851_84872942_84873079_84874275
ES.33406.2	chr8	-	3471	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	-1	1	-1	-1	multi-exon	FALSE	canonical	3	61	junction_17	12.7601500215095	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTTTTTGTCCTT	NA	False	NA	-2	True	AATGAA	-23	NA	84874566	84859457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.21	chr8	-	3501	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	61	junction_16	12.8602278181068	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874533	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.22	chr8	-	5393	19	NNC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_16	24.6647271509761	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGCCTCAGCTTTGTC	NA	False	NA	-13	True	AATGAA	-12	NA	84874471	84859468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84859887_84859960_84860009_84860092_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870688_84870737_84870851_84872942_84873079_84874275
ES.33406.23	chr8	-	3810	8	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-2043	-4	intron_retention	FALSE	canonical	3	73	junction_1	14.8406501865378	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84865460	84859469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84860009_84860092_84861167_84861250_84861389_84861525_84861791_84862233_84863618_84863698_84863822_84865089_84865263_84865346
ES.33406.24	chr8	-	6216	25	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-16	-4	intron_retention	FALSE	canonical	2	5	junction_3	21.792582836063	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874510	84859469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84873079_84874275
ES.33406.25	chr8	-	4575	23	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	61	junction_12	12.9218886627138	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874535	84859469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84861167_84861250_84861389_84861525_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.26	chr8	-	3481	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	8	-4	intron_retention	FALSE	canonical	3	61	junction_16	12.9909750249458	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874518	84859469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.27	chr8	-	3359	29	NNC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26.5634348574986	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGCCTCAGCTTTGT	NA	False	NA	-14	True	AATGAA	-11	NA	84874498	84859469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84859887_84859960_84860009_84860096_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873051_84874275
ES.33406.28	chr8	-	3477	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	11	-5	intron_retention	FALSE	canonical	3	61	junction_17	12.8602278181068	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTTGCCTCAGCTTTG	NA	False	NA	-15	True	AATGAA	-10	NA	84874515	84859470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.29	chr8	-	3869	25	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-16	-5	intron_retention	FALSE	canonical	3	61	junction_13	12.6517867644587	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTTGCCTCAGCTTTG	NA	False	NA	-15	True	AATGAA	-10	NA	84874510	84859470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.3	chr8	-	3397	29	NNC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.149944516741	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTGTCTTTTTGTCCT	NA	False	NA	-3	True	AATGAA	-22	NA	84874501	84859458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860512_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.30	chr8	-	4128	24	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	61	junction_13	13.3086097180584	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTTGCCTCAGCTTTG	NA	False	NA	-15	True	AATGAA	-10	NA	84874501	84859470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84860009_84860092_84860670_84861104_84861167_84861250_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.31	chr8	-	3786	26	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	8	-6	intron_retention	FALSE	canonical	3	61	junction_14	12.9389953242128	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACACTTGCCTCAGCTTT	NA	False	NA	-16	True	AATGAA	-9	NA	84874518	84859471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.32	chr8	-	4251	27	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	14	-6	intron_retention	FALSE	canonical	3	61	junction_15	13.0354546112929	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACACTTGCCTCAGCTTT	NA	False	NA	-16	True	AATGAA	-9	NA	84874512	84859471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.33	chr8	-	6415	1	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	11	4979	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAAACTGACAGATTAA	NA	False	NA	NA	False	NA	NA	NA	84874515	84868100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84868100_84874500
ES.33406.34	chr8	-	3079	4	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	12	4979	intron_retention	FALSE	canonical	3	84	junction_2	7.36357401145817	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGAAACTGACAGATTAA	NA	False	NA	NA	False	NA	NA	NA	84874553	84868100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.35	chr8	-	5709	2	ISM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	73	9229	2	4394	intron_retention	FALSE	canonical	3	93	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGACAGGGTCTCACT	NA	False	NA	NA	False	AATAAA	-18	NA	84874492	84868685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84870139_84870236
ES.33406.6	chr8	-	2007	12	NIC	ENSMUSG00000036686.17	novel	3262	28	NA	NA	-406	0	intron_retention	FALSE	canonical	3	77	junction_11	11.3239306320146	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	False	NA	-10	True	AATGAA	-15	NA	84863823	84859465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698
ES.33406.7	chr8	-	3283	28	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	20.7894269846098	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCAGCTTTGTCTTT	NA	False	NA	-10	True	AATGAA	-15	NA	84874513	84859465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33406.9	chr8	-	3780	26	NIC	ENSMUSG00000036686.17	novel	3471	29	NA	NA	-13	-2	intron_retention	FALSE	canonical	2	5	junction_3	21.3891187289238	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTCAGCTTTGTCT	NA	False	NA	-12	True	AATGAA	-13	NA	84874507	84859467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84859887_84859960_84860009_84860092_84860170_84860605_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ES.33407.1	chr8	+	2479	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	-20	7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5.99659767480439	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTAGCTGTGCTGCAGA	1863	False	NA	12	True	AATAAA	-22	NA	84874633	84899226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.10	chr8	+	2027	7	NNC	ENSMUSG00000008129.15	novel	378	5	NA	NA	1227	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.10349718742881	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	3337	False	NA	4	True	AATAAA	-14	NA	84876107	84899218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_84876163_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.2	chr8	+	2057	8	NIC	ENSMUSG00000008129.15	novel	378	5	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	7.63183450811033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1886	False	NA	4	True	AATAAA	-14	NA	84874656	84899218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84874694_84875466_84875515_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.3	chr8	+	2387	8	FSM	ENSMUSG00000008129.15	ENSMUST00000093375.5	2167	8	-220	0	7	0	multi-exon	FALSE	canonical	2	6	junction_4	5.92125193601792	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1890	False	NA	4	True	AATAAA	-14	NA	84874660	84899218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.4	chr8	+	2339	7	NIC	ENSMUSG00000008129.15	novel	2167	8	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	7.34279692397023	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGATCTGTAGCTGT	1890	False	NA	4	True	AATAAA	-14	NA	84874660	84899218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.5	chr8	+	2391	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	5.67845911838623	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCCTCTGATCTGTAGC	1890	False	NA	1	True	AATAAA	-11	NA	84874660	84899215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84898446_84898540_84898789
ES.33407.6	chr8	+	1522	1	NIC	ENSMUSG00000008129.15	novel	378	5	NA	NA	11	-12790	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTTGCTTTTGTTCAT	1894	False	NA	NA	False	NA	NA	NA	84874664	84876186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84874700_84876200
ES.33407.7	chr8	+	3931	7	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	13	-2	intron_retention	FALSE	canonical	2	14	junction_6	3.29983164553722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGATCTGTAGCT	1896	False	NA	2	True	AATAAA	-12	NA	84874666	84899216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_84875515_84886073_84886237_84887841_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.8	chr8	+	2479	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	-116	3	18	-2	multi-exon	FALSE	canonical	2	9	junction_1	4.49826355386165	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGATCTGTAGCT	1901	False	NA	2	True	AATAAA	-12	NA	84874671	84899216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33407.9	chr8	+	2195	8	ISM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	607	3	514	-2	3prime_fragment	FALSE	canonical	2	12	junction_3	3.77424137532083	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGATCTGTAGCT	2624	False	NA	2	True	AATAAA	-12	NA	84875394	84899216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ES.33408.1	chr8	-	2799	1	Intergenic	novelGene_27191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	TTTAAA	-39	NA	84881237	84878438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84878400_84881200
ES.33409.1	chr8	-	862	2	Antisense	novelGene_ENSMUSG00002075294.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	9681	False	NA	NA	False	NA	NA	NA	84884247	84882019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84882255_84883620
ES.3341.1	chr10	-	394	1	Intergenic	novelGene_2582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	80477691	80477297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80477300_80477700
ES.33410.1	chr8	-	197	1	Intergenic	novelGene_27192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGCACAGGATAGCCTT	2840	False	NA	NA	False	NA	NA	NA	84891088	84890891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84890900_84891100
ES.33411.1	chr8	-	2128	1	Antisense	novelGene_ENSMUSG00000008129.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	84899277	84897149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_84897100_84899300
ES.33412.1	chr8	-	3910	1	Genic_Genomic	ENSMUSG00000056155.7	novel	NA	NA	NA	NA	-1079	9	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGTGGTATGAATCTG	NA	False	NA	6	True	AATAAA	-26	NA	84904260	84900350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_84900400_84904300
ES.33412.2	chr8	-	413	2	NNC	ENSMUSG00000056155.7	novel	434	2	NA	NA	1246	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTCTTGGGACAAGGT	NA	False	NA	-6	True	AATAAA	-14	NA	84910600	84900362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84900602_84910426
ES.33413.1	chr8	+	179	1	Intergenic	novelGene_27193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	8698	False	NA	NA	False	NA	NA	NA	84922128	84922307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84922100_84922300
ES.33413.2	chr8	+	308	1	Intergenic	novelGene_27194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	8699	False	NA	NA	False	NA	NA	NA	84922129	84922437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_84922100_84922400
ES.33414.1	chr8	-	176	1	Intergenic	novelGene_27195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAT	4078	False	NA	NA	False	NA	NA	NA	84933307	84933131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84933100_84933300
ES.33415.1	chr8	-	4408	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	-47	264	-47	-264	multi-exon	TRUE	canonical	3	19	junction_10	5.27694550342846	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGTTGCATTGCTAAC	6039	False	NA	2	True	AAAAAG	-29	NA	84963731	84937570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.10	chr8	-	4260	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	0	365	0	-365	multi-exon	FALSE	canonical	3	19	junction_10	5.27694550342846	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTTTCTTATTTATT	6086	False	NA	-99	True	AAAAAG	-16	NA	84963684	84937671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.11	chr8	-	3480	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	-28	1173	-28	-1173	multi-exon	FALSE	canonical	3	19	junction_10	5.27694550342846	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGGTGACATCATTCC	6058	False	NA	NA	False	AGTAAA	-17	NA	84963712	84938479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.3	chr8	-	4327	14	NNC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	-41	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.09450708788539	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAAGACTGGGTTGCATT	6045	False	NA	-4	True	AAAAAG	-23	NA	84963725	84937576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955720_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.4	chr8	-	5888	13	NIC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	0	-272	intron_retention	FALSE	canonical	3	19	junction_9	5.35931173027118	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAAGACTGGGTTGCA	6086	False	NA	-6	True	AAAAAG	-21	NA	84963684	84937578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.5	chr8	-	4199	13	NIC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	-6	-283	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.81720225216341	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTTTTTAACTTCAAG	6080	False	NA	-17	True	AAAAAG	-10	NA	84963690	84937589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84957369_84957727_84961531_84961734_84963495
ES.33415.6	chr8	-	2485	5	NNC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	13576	-285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.0423466699836	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTTCTTTTTAACTTCA	NA	False	NA	-19	True	AAAAAG	-8	NA	84950108	84937591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84939416_84940651_84940734_84943873_84944038_84946454_84946610_84949848
ES.33415.7	chr8	-	4855	12	NIC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	0	-302	intron_retention	FALSE	canonical	3	19	junction_8	5.24443821885671	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGATTGAACACA	6086	False	NA	-36	True	NA	NA	NA	84963684	84937608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ES.33415.8	chr8	-	2301	4	NIC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	13597	-303	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	13.1993265821489	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGATTGAACAC	NA	False	NA	-37	True	NA	NA	NA	84950087	84937609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84939435_84940651_84940734_84946454_84946610_84949848
ES.33415.9	chr8	-	4422	12	NIC	ENSMUSG00000035671.7	novel	4625	14	NA	NA	4	-365	intron_retention	FALSE	canonical	0	0	junction_9	9.09545340965874	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTTTCTTATTTATT	6090	False	NA	-99	True	AAAAAG	-16	NA	84963680	84937671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84957369_84957727_84961531_84961734_84963495
ES.33416.1	chr8	-	176	1	Intergenic	novelGene_27196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAAGTCTG	8603	False	NA	NA	False	NA	NA	NA	84970113	84969937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_84969900_84970100
ES.33417.1	chr8	-	1749	6	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	804	4	NA	NA	25	5	intron_retention	FALSE	canonical	3	6	junction_3	848.617133930255	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTTTGGTGCTTT	6991	False	NA	-2	True	AATAAA	-17	NA	84983928	84972861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84976465_84980491_84980982_84982936_84983049_84983518
ES.33417.10	chr8	-	1685	7	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	804	4	NA	NA	-3	-1	multi-exon	FALSE	canonical	3	6	junction_3	804.610136788136	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTGTGTGCTGTTTGG	6961	False	NA	-8	True	AATAAA	-11	NA	84983958	84972867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84976465_84980491_84980717_84980804_84980982_84982936_84983049_84983518
ES.33417.11	chr8	-	2776	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	35	8	35	-8	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGCGCATGTTTTACAA	7001	False	NA	NA	False	NA	NA	NA	84983918	84976542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ES.33417.12	chr8	-	2373	5	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	297	-8	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	77.3579343054092	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGCGCATGTTTTACAA	7340	False	NA	NA	False	NA	NA	NA	84983579	84976542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84978341_84980491_84980717_84980804_84980982_84982936_84983049_84983518
ES.33417.13	chr8	-	1249	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	-7	1577	-5	-461	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCATCTTCACCCACA	6959	False	NA	-3	True	AATAAA	-19	NA	84983960	84978111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ES.33417.14	chr8	-	1296	4	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	34	-461	intron_retention	FALSE	canonical	3	199	junction_1	15.6914697279198	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCATCTTCACCCACA	7000	False	NA	-3	True	AATAAA	-19	NA	84983919	84978111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84978341_84980491_84980982_84982872_84983049_84983518
ES.33417.15	chr8	-	3371	4	NNC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	-18	-466	intron_retention	FALSE	non_canonical	0	0	junction_1	108.573579761479	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	7025	False	NA	-8	True	AATAAA	-14	NA	84983894	84978116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84979752_84979797_84980982_84982872_84983049_84983518
ES.33417.17	chr8	-	1118	5	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	-31	-466	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	98.2356859801976	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	7012	False	NA	-8	True	AATAAA	-14	NA	84983907	84978116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84978341_84980491_84980717_84980813_84980982_84982936_84983049_84983518
ES.33417.19	chr8	-	1338	3	NIC	ENSMUSG00000004996.10	novel	804	4	NA	NA	35	404	intron_retention	FALSE	canonical	3	28	junction_1	97.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTATTTTATAAGT	7001	False	NA	NA	False	AAAAAG	-11	NA	84983918	84980155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84980982_84982936_84983049_84983518
ES.33417.3	chr8	-	1800	6	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	804	4	NA	NA	34	3	intron_retention	FALSE	canonical	3	6	junction_2	681.688315874638	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	7000	False	NA	-4	True	AATAAA	-15	NA	84983919	84972863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976465_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ES.33417.4	chr8	-	5696	6	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	804	4	NA	NA	-20	3	intron_retention	TRUE	non_canonical	0	0	junction_3	849.707808602463	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	7023	False	NA	-4	True	AATAAA	-15	NA	84983896	84972863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84979752_84979797_84980982_84982936_84983049_84983518
ES.33417.5	chr8	-	1164	6	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	616	3	NA	NA	143	3	multi-exon	FALSE	canonical	3	6	junction_3	819.865354799189	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	8020	False	NA	-4	True	AATAAA	-15	NA	84982899	84972863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84976465_84980491_84980717_84980804_84980982_84982872
ES.33417.6	chr8	-	1807	6	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	804	4	NA	NA	29	3	intron_retention	FALSE	canonical	3	6	junction_3	815.265208383137	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTGTTTGGTGCT	6995	False	NA	-4	True	AATAAA	-15	NA	84983924	84972863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84976465_84980491_84980982_84982872_84983049_84983518
ES.33417.7	chr8	-	1783	8	Fusion	ENSMUSG00000004996.10_ENSMUSG00000019362.9	novel	2819	5	NA	NA	29	1	multi-exon	FALSE	canonical	0	0	junction_3	764.577701234145	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTGTGCTGTTTGGTG	6995	False	NA	-6	True	AATAAA	-13	NA	84983924	84972865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_84973323_84976102_84976159_84976244_84976465_84978012_84978079_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ES.33417.8	chr8	-	3368	2	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	63	1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTGTGCTGTTTGGTG	9897	False	NA	-6	True	AATAAA	-13	NA	84976285	84972865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84975033_84975084
ES.33417.9	chr8	-	2166	2	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTGTGCTGTTTGGTG	9828	False	NA	-6	True	AATAAA	-13	NA	84976354	84972865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84973868_84975190
ES.33418.1	chr8	-	2165	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-19	-27	-19	27	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTGTTTGCATGT	NA	False	NA	NA	False	NA	NA	NA	84997028	84984396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.10	chr8	-	2350	4	NIC	ENSMUSG00000004994.13	novel	1247	5	NA	NA	-786	1	intron_retention	FALSE	canonical	3	198	junction_2	18.3726850393609	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	1359	False	NA	-21	True	ATTAAA	-16	NA	84989560	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985556_84985741_84985881_84986922_84987315_84988368
ES.33418.11	chr8	-	4036	7	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	143	junction_6	34.6634613902818	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84996999	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985881_84986922_84987096_84987171_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.12	chr8	-	1661	10	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-21	1	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	70.0393187633882	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997030	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989595_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.13	chr8	-	4097	6	NIC	ENSMUSG00000004994.13	novel	1441	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	143	junction_5	38.7731866113684	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84996996	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.14	chr8	-	3046	8	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-54	1	intron_retention	FALSE	canonical	3	143	junction_7	33.7294154913446	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997063	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985881_84986922_84987096_84987171_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.15	chr8	-	1793	11	NNC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	90.7466803800558	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997000	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84987944_84988133_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.16	chr8	-	2434	10	NNC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	73.9158680903874	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997011	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84988133_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.18	chr8	-	3629	8	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	143	junction_7	33.8218622690552	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCCTTGTTTCTAAAC	NA	False	NA	-23	True	ATTAAA	-14	NA	84997021	84984930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.20	chr8	-	1512	8	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	-35	1331	-2	-517	5prime_fragment	FALSE	canonical	3	143	junction_7	34.7521838984874	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCTAGGGCCCCAGA	NA	False	NA	NA	False	NA	NA	NA	84997011	84986260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.21	chr8	-	2023	1	Genic_Genomic	ENSMUSG00000004994.13	novel	NA	NA	NA	NA	-32	-4209	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAAACAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84997041	84995018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_84995000_84997000
ES.33418.3	chr8	-	3199	8	NIC	ENSMUSG00000004994.13	novel	1441	9	NA	NA	-1	26	intron_retention	FALSE	canonical	3	13	junction_1	79.1028779888725	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTGTGTTTGCATG	NA	False	NA	NA	False	NA	NA	NA	84997010	84984397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.4	chr8	-	2924	7	NIC	ENSMUSG00000004994.13	novel	1441	9	NA	NA	0	20	intron_retention	FALSE	canonical	3	143	junction_6	37.4951848760463	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTAGCTGCCCTGCC	NA	False	NA	-2	True	ATTAAA	-35	NA	84996996	84984909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.5	chr8	-	1468	9	FSM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	-21	-6	-1	6	multi-exon	FALSE	canonical	3	13	junction_1	76.6823806359714	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTCTAAACTCATCTA	NA	False	NA	-16	True	ATTAAA	-21	NA	84996997	84984923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.6	chr8	-	1676	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	-59	502	-59	4	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTTTCTAAACTCATC	NA	False	NA	-18	True	ATTAAA	-19	NA	84997068	84984925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.7	chr8	-	2830	9	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-22	3	intron_retention	FALSE	canonical	3	143	junction_8	31.6501875981802	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTGTTTCTAAACTCAT	NA	False	NA	-19	True	ATTAAA	-18	NA	84997031	84984926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ES.33418.8	chr8	-	2713	2	NIC	ENSMUSG00000004994.13	novel	1247	5	NA	NA	818	1	intron_retention	FALSE	canonical	3	227	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	3202	False	NA	-21	True	ATTAAA	-16	NA	84987717	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_84987096_84987171
ES.33418.9	chr8	-	1649	11	NNC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.4740504141567	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTTTCTAAACTC	NA	False	NA	-21	True	ATTAAA	-16	NA	84997000	84984928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993672_84995570_84995647_84996970
ES.33419.1	chr8	+	177	1	Intergenic	novelGene_27197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	2460	False	NA	NA	False	NA	NA	NA	85029335	85029512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85029300_85029500
ES.3342.1	chr10	-	2749	8	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-12	-1	intron_retention	TRUE	canonical	3	325	junction_3	62.2047311016499	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTATGTTGTCTGAGT	NA	False	NA	0	True	AATAAA	-25	NA	80492340	80478451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.10	chr10	-	3406	6	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	473	junction_3	15.3883072493371	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492326	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80480184_80480436_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.11	chr10	-	2988	8	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	442	junction_1	26.9837441616169	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492331	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.12	chr10	-	3166	8	NIC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	325	junction_4	58.6483815041918	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492355	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80484514_80491963
ES.3342.13	chr10	-	2746	8	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	105	junction_3	136.597277888436	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492326	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.14	chr10	-	2358	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.307533653781	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCATCGAGTGCTATGT	NA	False	NA	-9	True	AATAAA	-16	NA	80492322	80478460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479714_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.15	chr10	-	3558	6	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	-4	intron_retention	FALSE	canonical	3	325	junction_2	68.9393936729937	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCATCGAGTGCTATGT	NA	False	NA	-9	True	AATAAA	-16	NA	80492326	80478460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80484514_80491963
ES.3342.16	chr10	-	2723	8	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	3	-4	intron_retention	FALSE	canonical	1	1	junction_6	194.337703128196	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCATCGAGTGCTATGT	NA	False	NA	-9	True	AATAAA	-16	NA	80492325	80478460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479807_80480095_80480648_80481173_80481372_80482214_80482321_80483538_80483712_80484393_80484514_80491963
ES.3342.17	chr10	-	2572	8	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	-5	intron_retention	FALSE	canonical	3	325	junction_3	61.7503201677232	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCATCGAGTGCTATG	NA	False	NA	-10	True	AATAAA	-15	NA	80492328	80478461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.18	chr10	-	2456	9	NNC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	161.952491104645	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCATCGAGTGCTATG	NA	False	NA	-10	True	AATAAA	-15	NA	80492333	80478461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479820_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.19	chr10	-	2453	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	160.387616417228	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATCATCGAGTGCTAT	NA	False	NA	-11	True	AATAAA	-14	NA	80492328	80478462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483712_80484393_80484514_80491963
ES.3342.2	chr10	-	3040	9	FSM	ENSMUSG00000003344.15	ENSMUST00000003434.14	3026	9	-15	1	-15	-1	multi-exon	FALSE	canonical	3	325	junction_4	58.371118714652	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTATGTTGTCTGAGT	NA	False	NA	0	True	AATAAA	-25	NA	80492920	80478451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.20	chr10	-	1548	1	Intergenic	novelGene_2583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTCCTTCTGACAT	NA	False	NA	NA	False	NA	NA	NA	80489092	80487544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80487500_80489100
ES.3342.21	chr10	-	4225	12	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	5	763	intron_retention	FALSE	canonical	3	25	junction_1	143.091197874261	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	9986	False	NA	NA	False	NA	NA	NA	80512122	80500397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.22	chr10	-	3765	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	-324	44	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTTGGTTCTTTGGA	9657	False	NA	-2	True	NA	NA	NA	80512451	80501116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.23	chr10	-	3507	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	-29	-39	-29	39	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGAGTCCTTGGTTCT	9952	False	NA	-7	True	TTTAAA	-42	NA	80512156	80501121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.25	chr10	-	3952	11	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	4	intron_retention	FALSE	canonical	1	3	junction_6	185.553334650714	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAGTGACAGCAGCAGA	9981	False	NA	-42	True	AATAAA	-18	NA	80512127	80501156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.27	chr10	-	3456	11	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	4	intron_retention	FALSE	canonical	1	3	junction_7	227.011982062622	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAGTGACAGCAGCAGA	9982	False	NA	-42	True	AATAAA	-18	NA	80512126	80501156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505463_80505538_80507392_80507491_80507569_80507672_80507761_80507909_80511657
ES.3342.28	chr10	-	3458	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	131.855892289124	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGTGACAGCAGCAG	9982	False	NA	-43	True	AATAAA	-17	NA	80512126	80501157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
ES.3342.29	chr10	-	3519	13	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	3	intron_retention	FALSE	canonical	3	105	junction_12	115.495400341312	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGTGACAGCAGCAG	9983	False	NA	-43	True	AATAAA	-17	NA	80512125	80501157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.30	chr10	-	3634	12	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_10	179.166988916361	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGTGACAGCAGCAG	9981	False	NA	-43	True	AATAAA	-17	NA	80512127	80501157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80511657_80511775_80511914
ES.3342.31	chr10	-	3485	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	433	junction_2	29.6690073982936	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9982	False	NA	-44	True	AATAAA	-16	NA	80512126	80501158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.32	chr10	-	3353	13	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	173.799852959917	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9981	False	NA	-44	True	AATAAA	-16	NA	80512127	80501158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80511657_80511775_80511914
ES.3342.33	chr10	-	3355	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	137.870913861078	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9981	False	NA	-44	True	AATAAA	-16	NA	80512127	80501158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.34	chr10	-	3599	12	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	433	junction_2	30.6014097876509	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCAGTGACAGCAGCA	9982	False	NA	-44	True	AATAAA	-16	NA	80512126	80501158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.35	chr10	-	3498	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_12	162.294603919965	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511914
ES.3342.36	chr10	-	3393	13	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	169.890324098291	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.37	chr10	-	3983	12	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	491	junction_5	18.032569248973	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9983	False	NA	-47	True	AATAAA	-13	NA	80512125	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.38	chr10	-	3389	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	140.03047005698	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507767_80507850_80511657_80511775_80511956
ES.3342.39	chr10	-	3386	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	139.413861764428	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9981	False	NA	-47	True	AATAAA	-13	NA	80512127	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504877_80505000_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.4	chr10	-	2438	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.307533653781	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492324	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479790_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.41	chr10	-	4098	11	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	491	junction_4	18.6142418593936	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9982	False	NA	-47	True	AATAAA	-13	NA	80512126	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503965_80504355_80504551_80504778_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.42	chr10	-	3298	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	144.500937136523	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9983	False	NA	-47	True	AATAAA	-13	NA	80512125	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.44	chr10	-	3574	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	29	junction_11	167.530594220877	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGCAGTGACAGCA	9983	False	NA	-47	True	AATAAA	-13	NA	80512125	80501161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507672_80507761_80507909_80511657_80511775_80511914
ES.3342.45	chr10	-	3434	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.5404100579	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTCTGTGCAGTGACA	9981	False	NA	-50	True	AATAAA	-10	NA	80512127	80501164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504541_80504769_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.46	chr10	-	3310	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	201.230210537921	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9981	False	NA	-51	True	AATAAA	-9	NA	80512127	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80501806_80501885_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.47	chr10	-	3730	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	29	junction_11	136.386985164356	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9982	False	NA	-51	True	AATAAA	-9	NA	80512126	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
ES.3342.49	chr10	-	3260	12	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	196.77158801829	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9981	False	NA	-51	True	AATAAA	-9	NA	80512127	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80511657_80511775_80511956
ES.3342.5	chr10	-	1784	6	NNC	ENSMUSG00000003344.15	novel	3026	9	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.768124960114	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492336	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479316_80481200_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.50	chr10	-	3426	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.634135123191	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9983	False	NA	-51	True	AATAAA	-9	NA	80512125	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503161_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.51	chr10	-	3310	12	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	210.47408116672	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9981	False	NA	-51	True	AATAAA	-9	NA	80512127	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.52	chr10	-	2842	1	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	3803	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	676	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	NA	False	NA	-51	True	AATAAA	-9	NA	80504007	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80501200_80504000
ES.3342.53	chr10	-	3536	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	29	junction_11	136.966008556868	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9983	False	NA	-51	True	AATAAA	-9	NA	80512125	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507909_80511657_80511775_80511956
ES.3342.55	chr10	-	3481	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	433	junction_2	29.6690073982936	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9982	False	NA	-51	True	AATAAA	-9	NA	80512126	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507850_80511657_80511775_80511956
ES.3342.56	chr10	-	3322	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	204.641760156621	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	9982	False	NA	-51	True	AATAAA	-9	NA	80512126	80501165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503161_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.6	chr10	-	2447	10	Fusion	ENSMUSG00000003344.15_ENSMUSG00000020190.14	novel	2449	9	NA	NA	90	-2	multi-exon	TRUE	non_canonical	0	0	junction_9	182.706064959102	1141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	8241	False	NA	-7	True	AATAAA	-18	NA	80512037	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963_80492303_80512023
ES.3342.60	chr10	-	3670	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	433	junction_1	29.5813379608759	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTTCTGTGCAGTGA	9982	False	NA	-52	True	AATAAA	-8	NA	80512126	80501166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.61	chr10	-	2284	15	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.144367252209	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTTCTGTGCAGTGA	9981	False	NA	-52	True	AATAAA	-8	NA	80512127	80501166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80501421_80502527_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.62	chr10	-	3286	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	142.960051723861	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTTCTGTGCAGTGA	9981	False	NA	-52	True	AATAAA	-8	NA	80512127	80501166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.63	chr10	-	3384	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	138.574697349704	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTTCTGTGCAGTG	9981	False	NA	-53	True	AATAAA	-7	NA	80512127	80501167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507398_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.64	chr10	-	2892	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	-52	-552	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAGAGTACTTGAATGT	9929	False	NA	NA	False	AAGAAA	-23	NA	80512179	80501717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.65	chr10	-	2881	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	0	558	0	-553	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAGAGTACTTGAATG	9981	False	NA	NA	False	AAGAAA	-22	NA	80512127	80501718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.67	chr10	-	3460	12	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	2	-561	intron_retention	FALSE	canonical	3	105	junction_11	119.452815817006	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGTTCTTGAAGAGTA	9983	False	NA	NA	False	AAGAAA	-14	NA	80512125	80501726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.68	chr10	-	2829	13	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	-561	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	169.890324098291	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGTTCTTGAAGAGTA	9981	False	NA	NA	False	AAGAAA	-14	NA	80512127	80501726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ES.3342.69	chr10	-	1892	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	1	-1499	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTGTGAAGGTCCTGCC	9982	False	NA	NA	False	NA	NA	NA	80512126	80502664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
ES.3342.7	chr10	-	2370	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_8	145.445812504176	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492322	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80492028
ES.3342.8	chr10	-	3272	7	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	442	junction_1	25.467299294062	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492326	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80480184_80480436_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.3342.9	chr10	-	2710	8	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	2	-2	intron_retention	FALSE	canonical	3	105	junction_3	134.83398711613	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	False	NA	-7	True	AATAAA	-18	NA	80492326	80478458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80479526_80479659_80479807_80480095_80480648_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ES.33420.1	chr8	+	190	1	Intergenic	novelGene_27198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGATGCATGTAAAACA	1482	False	NA	NA	False	NA	NA	NA	85058727	85058917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85058700_85058900
ES.33421.1	chr8	+	5918	20	NNC	ENSMUSG00000034656.19	novel	8370	49	NA	NA	18109	8182	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	6.91539692869762	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGGTTTAAAAGGATGA	63	False	NA	NA	False	NA	NA	NA	85083376	85288895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85083755_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.10	chr8	+	5183	33	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	0	-14665	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	6.9840778739931	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCGCCTCCCCAACTGC	NA	False	NA	NA	False	ATTAAA	-12	NA	85141992	85324044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142130_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263033_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85323802
ES.33421.11	chr8	+	3743	19	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	1	6109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.10416327250924	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACACGAGTGGGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	85141993	85286822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263033_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.12	chr8	+	8104	31	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-4	-14822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.31268564083465	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACGTGGTCTGTGTGTCC	NA	False	NA	19	True	NA	NA	NA	85142001	85323887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279902_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765
ES.33421.15	chr8	+	6910	19	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-2	9284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.54448217306612	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGTCTACAGTCAGTT	NA	False	NA	NA	False	NA	NA	NA	85142003	85289997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142573_85188119_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.16	chr8	+	4676	28	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-2	1868	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.52903192575417	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATGAATGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	85142003	85308959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85308797
ES.33421.18	chr8	+	3199	17	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.8829499489681	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	85142009	85280712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890
ES.33421.19	chr8	+	3586	20	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	5	6109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.00534026609467	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACACGAGTGGGTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	85142010	85286822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142130_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.2	chr8	+	2877	6	NNC	ENSMUSG00000034656.19	novel	8370	49	NA	NA	18110	1433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.90948797331408	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGGATGGCTGTGTTTC	64	False	NA	NA	False	AATATA	-21	NA	85083377	85247101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85083755_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239
ES.33421.20	chr8	+	8101	31	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	5	-14828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.51835016617617	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCATGACGTGGTCTGT	NA	False	NA	13	True	NA	NA	NA	85142010	85323881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765
ES.33421.21	chr8	+	5583	32	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	5	-11073	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.66720427939821	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGGATGATTCGGATGT	NA	False	NA	NA	False	AATAAA	-21	NA	85142010	85327636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85327122
ES.33421.22	chr8	+	4465	27	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.53574604244695	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATTGGGTGTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	85142011	85307092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142130_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691
ES.33421.23	chr8	+	3067	14	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-24452	6114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.35535463561072	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACGAGTGGGTGTAAAGC	NA	False	NA	NA	False	ATTAAA	-28	NA	85249270	85286827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264052_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.24	chr8	+	2868	14	ISM	ENSMUSG00000034656.19	ENSMUST00000122053.2	7589	46	107436	79881	-24281	6098	internal_fragment	FALSE	non_canonical	0	0	junction_4	6.35535463561072	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAGGCTCGAATGGACA	NA	False	NA	NA	False	ATTAAA	-12	NA	85249441	85286811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.25	chr8	+	4398	25	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-10959	-13847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.02713770283116	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAATGGGTCCCTGTAA	NA	False	NA	NA	False	AGTAAA	-19	NA	85262763	85324862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85324108
ES.33421.26	chr8	+	4251	10	ISM	ENSMUSG00000034656.19	ENSMUST00000215756.2	7503	47	121650	78009	-9660	8153	internal_fragment	FALSE	canonical	3	9	junction_6	4.4165793143004	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	85264062	85288866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.27	chr8	+	5789	10	ISM	ENSMUSG00000034656.19	ENSMUST00000215756.2	7503	47	121683	76438	-9627	9724	internal_fragment	FALSE	canonical	3	9	junction_6	4.4165793143004	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGGGTCATTTTTA	NA	False	NA	NA	False	NA	NA	NA	85264095	85290437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.28	chr8	+	5023	27	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-2519	402	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	12.6603326839637	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCAGTGTGTAAA	NA	False	NA	9	True	AATAAA	-15	NA	85271203	85340073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339867_85339904
ES.33421.29	chr8	+	3714	16	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	12245	-3086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	4.36450328088878	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGAGGAGTTAATATC	NA	False	NA	NA	False	AAAAAG	-18	NA	85285967	85358067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85324108_85325080_85327122_85327636_85358032
ES.33421.30	chr8	+	5094	29	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	12250	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	13.5523832530199	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTTCTGAACTAGAGT	NA	False	NA	8	True	NA	NA	NA	85285972	85366875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85324108_85324139_85327122_85327291_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.31	chr8	+	3792	19	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-12277	402	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	14.6017080008885	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCAGTGTGTAAA	NA	False	NA	9	True	AATAAA	-15	NA	85286148	85340073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85327122_85327291_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913
ES.33421.32	chr8	+	5260	15	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-2428	-42	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	13.3889994444114	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85324694	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85327291_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.33	chr8	+	2908	7	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	-1168	402	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	18.8591268797542	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCAGTGTGTAAA	NA	False	NA	9	True	AATAAA	-15	NA	85325954	85340073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85327291_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339891_85339928
ES.33421.34	chr8	+	2698	14	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	6	-42	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	13.8943605264103	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85327128	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85327291_85328017_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.35	chr8	+	2159	5	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	-99	401	intron_retention	TRUE	non_canonical	0	0	junction_4	19.3778223750761	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGCTCAGTGTGTAA	NA	False	NA	8	True	AATAAA	-14	NA	85327960	85340072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85339844_85339886
ES.33421.36	chr8	+	1737	2	ISM	ENSMUSG00000034656.19	ENSMUST00000143215.8	740	4	-65	8728	-65	-8728	intron_retention	FALSE	canonical	3	44	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	85327994	85329981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85328135_85328384
ES.33421.37	chr8	+	1517	13	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-44	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	14.0593978059754	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAATCCTAACTCCACAG	NA	False	NA	NA	False	ATTAAA	-15	NA	85328015	85361171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85342202_85342300_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85361009
ES.33421.38	chr8	+	3559	5	FSM	ENSMUSG00000034656.19	ENSMUST00000141981.8	1153	5	-37	-2369	-24	2369	multi-exon	FALSE	canonical	3	25	junction_4	8.95474734428616	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTCTTTCTCTATTT	NA	False	NA	NA	False	AATATA	-15	NA	85328035	85342040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913
ES.33421.39	chr8	+	2842	15	NNC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.2850913463334	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGAACTAGAGTGGTC	NA	False	NA	12	True	NA	NA	NA	85328047	85366879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328200_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85342202_85342300_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.4	chr8	+	3835	20	NNC	ENSMUSG00000034656.19	novel	8370	49	NA	NA	18110	6100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.91539692869762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGCTCGAATGGACACG	64	False	NA	NA	False	ATTAAA	-14	NA	85083377	85286813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85083755_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644
ES.33421.41	chr8	+	980	8	NNC	ENSMUSG00000034656.19	novel	7589	46	NA	NA	-5	1829	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	17.2413835327229	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATGTGTATGAATT	NA	False	NA	NA	False	AAAAAG	-13	NA	85328054	85346355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85342202_85342300_85344420_85344527_85346119
ES.33421.42	chr8	+	2063	5	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	-4	398	intron_retention	TRUE	non_canonical	0	0	junction_4	19.3778223750761	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGATGGCTCAGTGTG	NA	False	NA	5	True	AATAAA	-11	NA	85328055	85340069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85339864_85339904
ES.33421.43	chr8	+	2734	12	NNC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	5	-42	intron_retention	FALSE	canonical	0	0	junction_11	13.5932652259909	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85328064	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328451_85328552_85328669_85338226_85338378_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365871
ES.33421.44	chr8	+	2847	14	NNC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	-6	-42	intron_retention	FALSE	non_canonical	0	0	junction_13	13.8815786152754	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85328066	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85366016_85366155
ES.33421.45	chr8	+	1503	6	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	1	402	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	18.7040102651811	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCAGTGTGTAAA	NA	False	NA	9	True	AATAAA	-15	NA	85328099	85340073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328135_85328384_85328465_85328552_85328669_85338226_85338378_85338913_85339830_85339868
ES.33421.46	chr8	+	1527	5	NNC	ENSMUSG00000034656.19	novel	1153	5	NA	NA	211	402	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	18.4034643477797	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGCTCAGTGTGTAAA	NA	False	NA	9	True	AATAAA	-15	NA	85328309	85340073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85328451_85328552_85328669_85338226_85338378_85338913_85339834_85339874
ES.33421.47	chr8	+	2703	14	NIC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	227	-42	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.3856548382021	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85328325	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85342202_85342300_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.48	chr8	+	2775	13	NIC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	235	-42	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	12.0991276085877	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85328333	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365672_85365866
ES.33421.49	chr8	+	1521	4	ISM	ENSMUSG00000034656.19	ENSMUST00000141981.8	1153	5	283	-401	-246	401	3prime_fragment	FALSE	canonical	3	25	junction_3	9.84321537348893	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGCTCAGTGTGTAA	NA	False	NA	8	True	AATAAA	-14	NA	85328355	85340072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85328451_85328552_85328669_85338226_85338378_85338913
ES.33421.5	chr8	+	4594	2	Intergenic	novelGene_27200	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAGGAAAAAGAAAAAG	2581	False	NA	NA	False	NA	NA	NA	85093692	85098350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85096982_85097045
ES.33421.50	chr8	+	4389	2	Intergenic	novelGene_27202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	85328707	85333145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85329668_85329716
ES.33421.51	chr8	+	6551	7	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	14474	-42	intron_retention	FALSE	canonical	3	12	junction_2	5.12076383191241	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85343075	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85363328_85365240
ES.33421.52	chr8	+	1852	7	NNC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-9229	-42	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.5738146170413	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85356390	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85356472_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.53	chr8	+	1924	7	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-9218	-42	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	6.02771377334171	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85356401	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33421.54	chr8	+	1352	2	ISM	ENSMUSG00000034656.19	ENSMUST00000238337.2	2941	16	37987	42	-510	-42	3prime_fragment	FALSE	canonical	3	39	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85365109	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85365495_85365866
ES.33421.55	chr8	+	1717	1	NIC	ENSMUSG00000034656.19	novel	8370	49	NA	NA	-503	-42	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAACAAAAAAATAAT	NA	False	NA	-34	True	NA	NA	NA	85365116	85366833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85365100_85366800
ES.33421.56	chr8	+	899	2	FSM	ENSMUSG00000034656.19	ENSMUST00000130507.2	249	2	-28	-622	-28	-7	multi-exon	FALSE	canonical	3	8	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	85365591	85366685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85365672_85365866
ES.33421.6	chr8	+	4420	27	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-1034	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.60430646664171	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTGTGCTGGGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	85140958	85307096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85141028_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691
ES.33421.7	chr8	+	5484	33	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-23	-11070	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.78895012133688	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATGATTCGGATGTATT	NA	False	NA	NA	False	AATAAA	-24	NA	85141969	85327639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142130_85142272_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85327122
ES.33421.8	chr8	+	5535	30	NNC	ENSMUSG00000034656.19	novel	7503	47	NA	NA	-9	8923	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.27472517174856	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGGTCTTTAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	85141983	85316014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264067_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377
ES.33421.9	chr8	+	7901	46	NNC	ENSMUSG00000034656.19	novel	7926	47	NA	NA	-8	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.1323352846062	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACGGACTTCTGAACTAG	NA	False	NA	5	True	NA	NA	NA	85141984	85366872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85142572_85188117_85188225_85189314_85189455_85241591_85241684_85245239_85245393_85249644_85249839_85260022_85260127_85262689_85262806_85263030_85263088_85264064_85264158_85271202_85271413_85275137_85275251_85276085_85276199_85276306_85276439_85276993_85277067_85279641_85279760_85279890_85279959_85283332_85283440_85285644_85286320_85292576_85293023_85294247_85294387_85296531_85296662_85297825_85297886_85298415_85298523_85306098_85306199_85306691_85306853_85307842_85307981_85310187_85310390_85313673_85313839_85315377_85315489_85320765_85320850_85328011_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913_85339042_85342202_85342300_85344420_85344527_85356231_85356340_85356453_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
ES.33422.1	chr8	-	176	1	Intergenic	novelGene_27199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTTAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	85090190	85090014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85090000_85090200
ES.33423.1	chr8	-	17093	5	Antisense	novelGene_ENSMUSG00000034656.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTCTTTGCTATAGGAA	68	False	NA	NA	False	NA	NA	NA	85261016	85141600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85142573_85188118_85188222_85189311_85189454_85241590_85241688_85245237
ES.33423.2	chr8	-	2800	1	Intergenic	novelGene_27201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAACCAGTC	NA	False	NA	NA	False	NA	NA	NA	85145980	85143180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85143200_85146000
ES.33424.1	chr8	-	810	2	Antisense	novelGene_ENSMUSG00000034656.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCGAGATGGTTTT	7774	False	NA	NA	False	AATACA	-20	NA	85328646	85327634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85328190_85328391
ES.33425.1	chr8	+	1072	1	Intergenic	novelGene_27203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATGTGTTTATTTACAG	NA	False	NA	NA	False	NA	NA	NA	85368830	85369902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85368800_85369900
ES.33426.1	chr8	+	180	1	Intergenic	novelGene_27204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATATGGTTATAA	NA	False	NA	NA	False	NA	NA	NA	85371009	85371189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85371000_85371200
ES.33427.1	chr8	+	139	1	Intergenic	novelGene_27205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85376007	85376146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85376000_85376100
ES.33428.1	chr8	+	177	1	Intergenic	novelGene_27206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	85378459	85378636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85378500_85378600
ES.33429.1	chr8	+	2541	1	Intergenic	novelGene_27207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTGCCACAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	85382564	85385105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85382600_85385100
ES.3343.1	chr10	+	173	1	Intergenic	novelGene_2584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80523589	80523762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80523600_80523800
ES.33430.1	chr8	-	3379	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	7	-1862	7	1862	mono-exon	FALSE	NA	NA	NA	NA	NA	728	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGAGGTGTATGTG	NA	False	NA	NA	False	AATAGA	-13	NA	85389476	85386097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85386100_85389500
ES.33430.2	chr8	-	3212	2	Genic_Genomic	ENSMUSG00000053560.6	novel	1524	1	NA	NA	-1728	16	multi-exon	TRUE	non_canonical	0	0	junction_1	0	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTGGTGGGGGAGGG	NA	False	NA	15	True	AATAAA	-36	NA	85391211	85387943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85390418_85390473
ES.33430.3	chr8	-	1368	2	Genic_Genomic	ENSMUSG00000053560.6	novel	1524	1	NA	NA	7	0	multi-exon	FALSE	canonical	0	0	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTCTGGCTTGCTT	NA	False	NA	-1	True	AATAAA	-20	NA	85389476	85387959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85389190_85389338
ES.33430.4	chr8	-	1336	2	Genic_Genomic	ENSMUSG00000053560.6	novel	1524	1	NA	NA	3	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGCGCGGCTTGTCTGG	NA	False	NA	-8	True	AATAAA	-13	NA	85389480	85387966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85388647_85388824
ES.33430.5	chr8	-	984	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	3	537	3	-537	mono-exon	FALSE	NA	NA	NA	NA	NA	716	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAATCTCAGGGTCGA	NA	False	NA	NA	False	ATTAAA	-39	NA	85389480	85388496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85388500_85389500
ES.33431.1	chr8	+	3907	15	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-19	-9	intron_retention	FALSE	canonical	3	37	junction_1	139.602368993407	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGGGAAGCCATCTGC	NA	False	NA	27	True	AATAAA	-27	NA	85412916	85426428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.10	chr8	+	2154	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	152.252552831636	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415873	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421954_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.11	chr8	+	2138	17	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	166.065581454286	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415883	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417379_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.12	chr8	+	2168	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	392	7	1	-7	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGGAAGCCATCTGCAT	NA	False	NA	29	True	AATAAA	-29	NA	85415886	85426430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.13	chr8	+	4146	14	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	2	-5	intron_retention	FALSE	canonical	3	179	junction_1	109.831231479411	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAAGCCATCTGCATGG	NA	False	NA	31	True	AATAAA	-31	NA	85415887	85426432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.14	chr8	+	2188	17	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	152.726829257338	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415889	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426138_85426231
ES.33431.15	chr8	+	2129	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	24	-15	-1	-6	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGAAGCCATCTGCATG	NA	False	NA	30	True	AATAAA	-30	NA	85415899	85426431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.16	chr8	+	2286	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	47	junction_5	162.783236920213	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421954_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.17	chr8	+	2061	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.18	chr8	+	3670	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	18	junction_8	167.05053921811	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415903	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423978_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.19	chr8	+	2271	16	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	38	junction_1	134.643331311531	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415903	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.2	chr8	+	2377	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-17	8	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	133.003230693844	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAATTGGGAAGCCAT	NA	False	NA	23	True	AATAAA	-23	NA	85412918	85426424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.20	chr8	+	2162	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	11	3	3	-2	intron_retention	FALSE	canonical	3	38	junction_1	132.38049537434	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGTTGTCATTTTGAA	NA	False	NA	11	True	AATAAA	-11	NA	85415903	85426412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.21	chr8	+	2163	18	NNC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	3	6547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	196.933287493972	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGCTTTCATCCCCGC	NA	False	NA	NA	False	NA	NA	NA	85415903	85432984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424364_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231_85426416_85432933
ES.33431.22	chr8	+	3661	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	179	junction_1	106.215822834492	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415903	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.23	chr8	+	3345	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	3	0	intron_retention	FALSE	canonical	3	129	junction_1	117.088380674125	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415903	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.24	chr8	+	2296	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	129	junction_1	113.803026712337	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415904	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.25	chr8	+	2098	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	161.765153366694	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415904	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.26	chr8	+	4329	14	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	179	junction_1	107.709394248912	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415904	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.27	chr8	+	4170	13	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_3	189.753714646703	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415904	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417884_85418069_85421850_85421967_85422056_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.28	chr8	+	2375	16	NNC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_11	202.318560690808	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421954_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424403_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.29	chr8	+	3583	15	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	4	0	intron_retention	FALSE	canonical	3	129	junction_1	117.756082212169	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415904	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.3	chr8	+	3881	15	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	7	-7	intron_retention	FALSE	canonical	3	18	junction_8	188.187393036726	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGGAAGCCATCTGCAT	NA	False	NA	29	True	AATAAA	-29	NA	85412954	85426430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423978_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.30	chr8	+	4304	14	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	4	2	intron_retention	FALSE	canonical	3	116	junction_1	122.901220739143	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATTTTGAATTGGGA	NA	False	NA	17	True	AATAAA	-17	NA	85415904	85426418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.31	chr8	+	2145	17	NIC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	163.562249235574	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415904	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.32	chr8	+	1979	16	NIC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	165.846059813176	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415904	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85426231
ES.33431.34	chr8	+	2373	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415905	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.35	chr8	+	2363	15	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	129	junction_1	117.794896982433	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415905	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.36	chr8	+	2123	17	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.740850731076	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415905	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424180_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.37	chr8	+	4319	12	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	5	0	intron_retention	FALSE	canonical	3	18	junction_7	196.676056179648	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415905	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423831_85423897_85423978_85424053_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.38	chr8	+	2068	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	163.36687049399	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415905	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.39	chr8	+	2179	17	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	188.250788510965	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415906	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426138_85426231
ES.33431.4	chr8	+	2569	16	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	7	0	intron_retention	FALSE	canonical	3	37	junction_1	134.875679382492	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85412954	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.40	chr8	+	2040	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	19	-15	0	-7	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGGAAGCCATCTGCAT	NA	False	NA	29	True	AATAAA	-29	NA	85415911	85426430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.41	chr8	+	2234	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	36	0	0	0	intron_retention	FALSE	canonical	3	116	junction_1	114.823032919745	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415911	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.42	chr8	+	4316	12	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_6	186.896709883532	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415917	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423978_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.43	chr8	+	2005	17	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	172.229452693202	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415918	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421954_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.44	chr8	+	3622	14	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	47	junction_5	174.479716865982	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415918	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421954_85422056_85423605_85423743_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.45	chr8	+	4074	14	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	0	intron_retention	FALSE	canonical	2	21	junction_5	171.578815536267	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415918	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422080_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.46	chr8	+	2254	16	ISM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	424	21	1	0	intron_retention	FALSE	canonical	3	179	junction_1	101.150624757778	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415918	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.47	chr8	+	4410	11	NIC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	116	junction_1	135.849953993367	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415918	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.48	chr8	+	2113	17	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	160.934332493101	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415918	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423750_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.49	chr8	+	2438	15	NNC	ENSMUSG00000001909.17	novel	2138	17	NA	NA	1	-1	intron_retention	FALSE	canonical	2	21	junction_5	169.936062406196	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415918	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422080_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.5	chr8	+	2408	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	140.676920970534	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85412955	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.50	chr8	+	4767	13	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	179	junction_1	111.505480682441	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415918	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.51	chr8	+	3776	13	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	129	junction_1	126.372108165616	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415918	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.52	chr8	+	4457	12	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	179	junction_1	116.287901490473	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415918	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85417577_85417880_85418069_85421850_85421967_85422056_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.53	chr8	+	4208	13	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	116	junction_1	129.328393376448	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415920	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.54	chr8	+	2634	15	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_13	193.741991276216	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415929	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421954_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425600_85425888_85425969
ES.33431.55	chr8	+	4423	12	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	22	0	intron_retention	FALSE	canonical	3	129	junction_1	129.497886003359	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415939	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.56	chr8	+	4142	13	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	25	0	intron_retention	FALSE	canonical	3	179	junction_1	114.315687413797	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415942	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.57	chr8	+	3688	14	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	25	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	173.666857847987	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415942	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416540_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.59	chr8	+	3367	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	54	1115	intron_retention	FALSE	canonical	3	129	junction_1	113.803026712337	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	85415971	85427552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.6	chr8	+	2240	18	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	174.713289603321	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85412960	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85413097_85413180_85413329_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.60	chr8	+	3510	12	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	55	-1	intron_retention	FALSE	canonical	0	0	junction_3	191.415993701227	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415972	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417880_85418069_85421850_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.61	chr8	+	2264	16	NNC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	55	0	intron_retention	FALSE	canonical	2	70	junction_15	146.588979425088	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415972	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426272
ES.33431.62	chr8	+	2075	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	156.933704155608	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415973	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.63	chr8	+	4840	11	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	59	0	intron_retention	FALSE	canonical	3	129	junction_1	135.186685734949	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415976	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423968_85424053_85424189_85424274_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.64	chr8	+	3710	14	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	73	-1	intron_retention	FALSE	canonical	3	179	junction_1	109.218580034956	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTTGTCATTTTGAAT	NA	False	NA	12	True	AATAAA	-12	NA	85415990	85426413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.65	chr8	+	2272	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	131	-1	-69	0	3prime_fragment	FALSE	canonical	3	403	junction_2	59.8663697097312	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85416023	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.66	chr8	+	2082	17	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	140.235947936861	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85416027	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416075_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.67	chr8	+	4907	12	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	-59	0	intron_retention	FALSE	canonical	3	466	junction_5	53.0873286463909	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416033	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.68	chr8	+	2441	15	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-56	0	intron_retention	FALSE	canonical	1	4	junction_1	143.126121776194	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85416036	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416075_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.69	chr8	+	2081	17	NNC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	181.994065408051	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416036	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416075_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.7	chr8	+	2335	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	176.76427629756	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85412960	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.70	chr8	+	3968	12	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	-20	0	intron_retention	FALSE	canonical	3	466	junction_4	47.2445720350694	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416072	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.71	chr8	+	3747	14	ISM	ENSMUSG00000001909.17	ENSMUST00000137953.8	3647	15	161	21	-20	0	3prime_fragment	FALSE	canonical	3	466	junction_5	51.4742424241105	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85416072	85426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.72	chr8	+	3525	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-17	1114	intron_retention	FALSE	canonical	3	24	junction_2	138.227795574507	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	85416075	85427551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.73	chr8	+	4195	13	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	-16	0	intron_retention	FALSE	canonical	3	466	junction_5	53.5425583583336	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416076	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.74	chr8	+	6079	7	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	18	junction_3	208.690693504899	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGGAAGCCATCTGCAT	NA	False	NA	29	True	AATAAA	-29	NA	85416090	85426430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85418069_85421850_85421967_85422056_85423978_85424053_85424923_85425021_85425888_85425969_85426100_85426231
ES.33431.75	chr8	+	3468	15	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	203	-1137	3	1115	intron_retention	FALSE	canonical	3	403	junction_2	54.9608394909596	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	85416095	85427552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.76	chr8	+	2058	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	140.002222204586	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85416244	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.77	chr8	+	2173	15	NNC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	75	0	intron_retention	FALSE	canonical	2	21	junction_4	143.465010311481	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85416335	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422080_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.78	chr8	+	3230	11	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	449	0	intron_retention	FALSE	canonical	3	474	junction_2	40.8177657399324	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85417466	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85417577_85417880_85418069_85421850_85421967_85422056_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969
ES.33431.79	chr8	+	4658	6	NIC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	-236	0	intron_retention	FALSE	canonical	3	500	junction_2	40.4049501917772	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85421314	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85421967_85422056_85423968_85424053_85424189_85424274_85424923_85425021_85425888_85425969
ES.33431.8	chr8	+	3694	14	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	216	0	intron_retention	FALSE	canonical	3	37	junction_1	144.851566547832	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85413183	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85413329_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.80	chr8	+	3868	8	NNC	ENSMUSG00000001909.17	novel	2044	17	NA	NA	-228	0	intron_retention	FALSE	canonical	0	0	junction_5	200.132609098292	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85421322	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85421967_85422056_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425748_85425888_85425969_85426100_85426231
ES.33431.81	chr8	+	3116	10	NIC	ENSMUSG00000001909.17	novel	3647	15	NA	NA	285	0	intron_retention	FALSE	canonical	3	47	junction_1	166.810234461161	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	257	False	NA	13	True	AATAAA	-13	NA	85421835	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85421954_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.82	chr8	+	1262	11	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	6162	0	504	0	3prime_fragment	FALSE	canonical	3	466	junction_2	51.8583648026044	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	476	False	NA	14	True	AATAAA	-14	NA	85422054	85426415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33431.83	chr8	+	1389	1	Antisense	novelGene_ENSMUSG00000001911.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACACTCAGCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	85431589	85432978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_85431600_85433000
ES.33431.84	chr8	+	1273	1	Antisense	novelGene_ENSMUSG00000001911.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGCAAAACAAAAAA	NA	False	NA	NA	False	TTTAAA	-27	NA	85431590	85432863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_85431600_85432900
ES.33431.9	chr8	+	3003	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	34	0	intron_retention	FALSE	canonical	3	466	junction_6	50.7506911584584	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCATTTTGAATT	NA	False	NA	13	True	AATAAA	-13	NA	85415528	85426414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ES.33432.1	chr8	+	3636	1	NIC	ENSMUSG00000074203.5	novel	721	2	NA	NA	201	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGTGGTGGCTCACATC	NA	False	NA	NA	False	ATTAAA	-14	NA	85449836	85453472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85449800_85453500
ES.33433.1	chr8	+	348	2	Antisense	novelGene_ENSMUSG00000001911.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAAGCCCTACCCATGT	NA	False	NA	NA	False	AATGAA	-14	NA	85456819	85458327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_85456987_85458146
ES.33434.1	chr8	+	2605	1	Intergenic	novelGene_27209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAATGAACACCCACAC	3510	False	NA	NA	False	NA	NA	NA	85519361	85521966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85519400_85522000
ES.33435.1	chr8	-	5665	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	46	-1367	46	1367	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTCTGGGTCGGCTGC	NA	False	NA	NA	False	NA	NA	NA	85414485	85395740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.10	chr8	-	4664	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	48	449	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAGTTTGATTTGTGGT	NA	False	NA	0	True	AATAAA	-21	NA	85414483	85396658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
ES.33435.11	chr8	-	4665	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	20	448	combination_of_known_junctions	FALSE	canonical	1	13	junction_5	270.474693825504	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTAGTTTGATTTGTGG	NA	False	NA	-1	True	AATAAA	-20	NA	85414200	85396659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414018
ES.33435.12	chr8	-	4569	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	16	444	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	237.650499683885	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAGGTTAGTTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	85413766	85396663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85413676
ES.33435.13	chr8	-	4362	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	-14	-4	-14	4	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGCTCTGCTCACTGG	NA	False	NA	-2	True	AATAAA	-23	NA	85414545	85397103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.14	chr8	-	4303	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-78	3	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGCTCTGCTCACTG	NA	False	NA	-3	True	AATAAA	-22	NA	85413860	85397104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.16	chr8	-	4278	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414544	85397105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
ES.33435.17	chr8	-	4157	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-14	2	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	237.650499683885	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85413796	85397105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85413676
ES.33435.19	chr8	-	4401	5	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	27	2	intron_retention	FALSE	canonical	3	570	junction_4	39.1176111233802	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414504	85397105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85403882_85414303
ES.33435.2	chr8	-	1806	1	Genic_Genomic	ENSMUSG00000001910.6	novel	NA	NA	NA	NA	5462	751	mono-exon	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAGAACAAAATCTGT	9855	False	NA	NA	False	AATAGA	-9	NA	85398162	85396356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85396400_85398200
ES.33435.20	chr8	-	4355	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	228.515732499975	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414502	85397105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401530_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.21	chr8	-	4262	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-23	2	combination_of_known_junctions	FALSE	canonical	1	13	junction_5	270.474693825504	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCTCTGCTCACT	NA	False	NA	-4	True	AATAAA	-21	NA	85414243	85397105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414018
ES.33435.22	chr8	-	4285	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	239.58764575829	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGTGCTCTGCTCAC	NA	False	NA	-5	True	AATAAA	-20	NA	85414504	85397106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402746_85402888_85402969_85403882_85414303
ES.33435.23	chr8	-	4201	5	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	240.627305183763	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414486	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.24	chr8	-	4289	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_5	236.841719297931	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414191	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414018
ES.33435.25	chr8	-	2924	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-158	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.916183832335	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	4235	False	NA	-6	True	AATAAA	-19	NA	85403782	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397450_85398542_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969
ES.33435.26	chr8	-	4532	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-1323	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	278.975158193142	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	9843	False	NA	-6	True	AATAAA	-19	NA	85415854	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414591_85414768_85415614
ES.33435.27	chr8	-	4210	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	241.916183832335	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414480	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414386
ES.33435.29	chr8	-	5299	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-1324	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_5	269.901167096402	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	9842	False	NA	-6	True	AATAAA	-19	NA	85415855	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414591
ES.33435.3	chr8	-	4941	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	31	-628	31	628	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCAAGCCTAATGAC	NA	False	NA	NA	False	NA	NA	NA	85414500	85396479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.30	chr8	-	4285	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	245.011020160319	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414480	85397107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402880_85402969_85403882_85414303
ES.33435.31	chr8	-	4220	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	37	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	274.23026820539	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTGTGCTCTGCTC	NA	False	NA	-7	True	AATAAA	-18	NA	85414183	85397108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85413997
ES.33435.32	chr8	-	4206	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	294.797286283304	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTGTGCTCTGCTC	NA	False	NA	-7	True	AATAAA	-18	NA	85413775	85397108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402746_85402888_85402969_85403907_85413676
ES.33435.33	chr8	-	4177	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	69	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.916183832335	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGCTGTGCTCTGCTC	NA	False	NA	-7	True	AATAAA	-18	NA	85413713	85397108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403907_85413676
ES.33435.34	chr8	-	4037	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	50	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	245.011020160319	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85414481	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397451_85397786_85399934_85401393_85401492_85401627_85401734_85402713_85403882_85414303
ES.33435.35	chr8	-	4299	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	37	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	241.916183832335	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85414183	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413997
ES.33435.36	chr8	-	4092	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	249.872912141797	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85413766	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399572_85399682_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.37	chr8	-	3587	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	59	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	258.357902057505	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85414472	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403217_85403830_85403882_85414303
ES.33435.38	chr8	-	4158	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	253.942688197335	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85413775	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85398572_85398625_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.39	chr8	-	4168	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-157	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.916183832335	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGCTGTGCTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	85413939	85397110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413884
ES.33435.4	chr8	-	4790	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	8	-454	8	454	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATTTGTGGTTTATG	NA	False	NA	5	True	AATAAA	-26	NA	85414523	85396653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.40	chr8	-	2972	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	50	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.813662575714	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414481	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397236_85398553_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.43	chr8	-	4170	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	271.90704293931	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414475	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402746_85402888_85403050_85403882_85414303
ES.33435.44	chr8	-	4203	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	294	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	241.916183832335	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85413488	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413397
ES.33435.48	chr8	-	3517	1	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	2996	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	7389	False	NA	-10	True	AATAAA	-15	NA	85400628	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85397100_85400600
ES.33435.5	chr8	-	5260	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-1284	450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	278.975158193142	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTTTGATTTGTGGTT	9882	False	NA	1	True	AATAAA	-22	NA	85415815	85396657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414591_85414768_85415297
ES.33435.51	chr8	-	3948	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.813662575714	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414475	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397451_85397786_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.52	chr8	-	3066	3	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	26	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	285	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414505	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399783_85403688_85403882_85414303
ES.33435.54	chr8	-	4103	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	41	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	223.813662575714	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414490	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397381_85397576_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.55	chr8	-	2120	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	43	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.357902057505	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	85414488	85397111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397236_85399331_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
ES.33435.57	chr8	-	3590	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	10	-622	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTCCTGATAACTTGG	NA	False	NA	NA	False	NA	NA	NA	85413772	85397729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.58	chr8	-	2872	6	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	55	1277	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	239.58764575829	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTTTTATTTTTCAA	NA	False	NA	NA	False	AATGAA	-15	NA	85414476	85398491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402746_85402888_85402969_85403882_85414303
ES.33435.59	chr8	-	2845	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	-7	1277	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTTTTATTTTTCAA	NA	False	NA	NA	False	AATGAA	-15	NA	85413789	85398491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.6	chr8	-	4429	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	29	450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.813662575714	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTTTGATTTGTGGTT	NA	False	NA	1	True	AATAAA	-22	NA	85414502	85396657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85397451_85397786_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.60	chr8	-	2961	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	-1	1384	-1	1277	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTTTTATTTTTCAA	NA	False	NA	NA	False	AATGAA	-15	NA	85414532	85398491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ES.33435.61	chr8	-	2850	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	27	1275	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTCCTTTTATTTTTC	NA	False	NA	NA	False	AATGAA	-13	NA	85414504	85398493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
ES.33435.62	chr8	-	2479	7	NNC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	71	1273	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	253.942688197335	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGATTTCCTTTTATTTT	NA	False	NA	NA	False	AATGAA	-11	NA	85413711	85398495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85398570_85398853_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.63	chr8	-	148	1	Intergenic	novelGene_27208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	775	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAGATGTGATGATTC	3375	False	NA	NA	False	NA	NA	NA	85404642	85404494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85404500_85404600
ES.33435.7	chr8	-	4648	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	23	449	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAGTTTGATTTGTGGT	NA	False	NA	0	True	AATAAA	-21	NA	85413759	85396658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
ES.33435.8	chr8	-	4746	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	21	449	combination_of_known_junctions	FALSE	canonical	1	13	junction_5	236.841719297931	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAGTTTGATTTGTGGT	NA	False	NA	0	True	AATAAA	-21	NA	85414199	85396658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414018
ES.33435.9	chr8	-	4844	5	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	31	449	intron_retention	FALSE	canonical	3	570	junction_4	39.1176111233802	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTAGTTTGATTTGTGGT	NA	False	NA	0	True	AATAAA	-21	NA	85414500	85396658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85403882_85414303
ES.33436.1	chr8	-	1574	1	Antisense	novelGene_ENSMUSG00000001909.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAAAGAGGGGGCTGG	5695	False	NA	NA	False	NA	NA	NA	85420002	85418428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85418400_85420000
ES.33437.1	chr8	-	5591	10	NIC	ENSMUSG00000001911.17	novel	1728	10	NA	NA	33	-5	intron_retention	FALSE	canonical	0	0	junction_5	1.13311544746506	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGAGTGCCTGAGTCTT	9975	False	NA	NA	False	AATAAA	-19	NA	85526940	85431345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
ES.33437.3	chr8	-	2155	10	NIC	ENSMUSG00000001911.17	novel	1728	10	NA	NA	-1	427	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.13311544746506	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGACTTCGTCTCTTTC	9941	False	NA	NA	False	NA	NA	NA	85526974	85434815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
ES.33437.4	chr8	-	1586	9	NNC	ENSMUSG00000001911.17	novel	1728	10	NA	NA	-16748	420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.36358901432946	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCCCTCCGGACTTCGT	NA	False	NA	NA	False	NA	NA	NA	85457445	85434822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85457127
ES.33438.1	chr8	+	758	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	728	1008	728	-1008	multi-exon	FALSE	canonical	3	736	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCCTCAAGTTGTGAC	3402	False	NA	35	True	AATAAA	-30	NA	85558878	85561103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85559270_85560736
ES.33438.2	chr8	+	1771	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	736	-13	736	13	multi-exon	FALSE	canonical	3	736	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCTTATAAACGTCTG	3410	False	NA	NA	False	NA	NA	NA	85558886	85562124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85559270_85560736
ES.33438.3	chr8	+	3064	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	740	-1310	740	1310	multi-exon	FALSE	canonical	3	736	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCCAGAGGTTCTGAT	3414	False	NA	NA	False	ATTAAA	-13	NA	85558890	85563421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85559270_85560736
ES.33438.4	chr8	+	2195	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	745	-1021	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTCTACACATTCTCC	3419	False	NA	22	True	AATAAA	-17	NA	85558895	85561090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85558900_85561100
ES.33438.6	chr8	+	2355	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	756	-617	756	617	multi-exon	FALSE	canonical	3	736	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTGGCAGATGCCTTT	3430	False	NA	NA	False	AATAAA	-23	NA	85558906	85562728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85559270_85560736
ES.33438.7	chr8	+	3184	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	766	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGTTATATATATATATA	3440	False	NA	NA	False	NA	NA	NA	85558916	85562100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85558900_85562100
ES.33438.8	chr8	+	1837	2	NNC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	818	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGTTATATATATATATA	3492	False	NA	NA	False	NA	NA	NA	85558968	85562100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85559270_85560564
ES.33439.1	chr8	-	1219	2	FSM	ENSMUSG00000053226.8	ENSMUST00000238279.2	1369	2	150	0	150	0	multi-exon	FALSE	canonical	3	24	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGCGTGCTTCTTTCT	549	False	NA	0	True	CATAAA	-15	NA	85558888	85542033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85543163_85558798
ES.33439.10	chr8	-	2095	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-14	-7	10	7	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTCCTTCATTATTTG	NA	False	NA	NA	False	NA	NA	NA	85567284	85561273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.12	chr8	-	1884	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	-65	255	-41	4	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTCACAGCTGTTTGT	NA	False	NA	-10	True	AATAAA	-41	NA	85567335	85561535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.13	chr8	-	1855	9	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	460.362747596936	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTCTCACAGCTGTTTG	NA	False	NA	-11	True	AATAAA	-40	NA	85567292	85561536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564076_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.15	chr8	-	1807	9	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	2	14	junction_6	465.935332825275	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCTCACAGCTGTTT	NA	False	NA	-12	True	AATAAA	-39	NA	85567274	85561537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564941_85565097_85565280_85565422_85565585_85567122
ES.33439.16	chr8	-	3445	7	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	614	junction_1	278.433365257989	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGCTTCTCACAGCTG	NA	False	NA	-15	True	AATAAA	-36	NA	85567278	85561540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.18	chr8	-	1783	9	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	447.214923163349	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGAGCTTCTCACAGC	NA	False	NA	-17	True	AATAAA	-34	NA	85567283	85561542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564355_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.19	chr8	-	3666	6	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-10	-18	intron_retention	FALSE	canonical	3	805	junction_1	232.450941060689	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567280	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564220_85564317_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.2	chr8	-	2035	8	Fusion	ENSMUSG00000003813.16_ENSMUSG00000053226.8	novel	429	4	NA	NA	1	-3	multi-exon	TRUE	canonical	1	2	junction_1	473.782262915214	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTGTGCGTGCTTCTT	NA	False	NA	-3	True	CATAAA	-12	NA	85567293	85542036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_85543163_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.22	chr8	-	1738	9	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-6	-18	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	435.873960423194	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567276	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562448_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.23	chr8	-	1656	8	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-4	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	592.812149755687	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567274	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564901_85564941_85565097_85565280_85565422_85565585_85567122
ES.33439.24	chr8	-	1652	7	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	626.261571194941	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567294	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564076_85564223_85564317_85564397_85565097_85565280_85565422_85565585_85567122
ES.33439.25	chr8	-	3940	4	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-6	-18	intron_retention	FALSE	canonical	3	805	junction_1	299.369708257569	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567276	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564220_85564317_85565280_85565422_85565585_85567122
ES.33439.26	chr8	-	2241	7	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-8	-18	intron_retention	FALSE	canonical	0	0	junction_1	618.363094521873	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567278	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562961_85564088_85564220_85564317_85564397_85564635_85564764_85565097_85565280_85565422_85565585_85567122
ES.33439.27	chr8	-	1939	10	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-54	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	547.805340753469	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTCATGCCTACT	NA	False	NA	-32	True	AATAAA	-19	NA	85567348	85561557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85562896_85562961_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.28	chr8	-	2038	8	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	0	-19	intron_retention	FALSE	canonical	3	614	junction_3	262.54274676241	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATGGTTCATGCCTAC	NA	False	NA	-33	True	AATAAA	-18	NA	85567270	85561558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.3	chr8	-	1599	9	Fusion	ENSMUSG00000003813.16_ENSMUSG00000053226.8	novel	429	4	NA	NA	1	-607	multi-exon	FALSE	canonical	3	11	junction_1	460.789522857237	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGCTATAGTGTATG	NA	False	NA	NA	False	AAAAAG	-4	NA	85567293	85542640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_85543163_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.30	chr8	-	3862	5	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-10	-23	intron_retention	FALSE	canonical	3	614	junction_2	346.154138354578	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAATAATGGTTCATGC	NA	False	NA	-37	True	AATAAA	-14	NA	85567280	85561562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564223_85564317_85565280_85565422_85565585_85567122
ES.33439.31	chr8	-	3408	7	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-10	-23	intron_retention	FALSE	canonical	2	14	junction_4	519.151685177099	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAATAATGGTTCATGC	NA	False	NA	-37	True	AATAAA	-14	NA	85567280	85561562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564223_85564317_85564397_85564635_85564764_85564901_85564941_85565097_85565280_85565422_85565585_85567122
ES.33439.32	chr8	-	3722	6	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	10	-24	intron_retention	FALSE	canonical	3	805	junction_2	236.256132195547	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTAATAATGGTTCATG	NA	False	NA	-38	True	AATAAA	-13	NA	85567284	85561563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564220_85564317_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.33	chr8	-	3319	8	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-3	-25	intron_retention	FALSE	canonical	2	14	junction_5	495.985434282508	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCTAATAATGGTTCAT	NA	False	NA	-39	True	AATAAA	-12	NA	85567273	85561564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564223_85564317_85564397_85564635_85564764_85564901_85564941_85565097_85565280_85565422_85565585_85567122
ES.33439.34	chr8	-	3326	8	ISM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	1	285	1	-26	intron_retention	FALSE	canonical	3	805	junction_3	186.372788589243	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCTAATAATGGTTCA	NA	False	NA	-40	True	AATAAA	-11	NA	85567269	85561565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422
ES.33439.35	chr8	-	3581	7	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-10	-26	intron_retention	FALSE	canonical	3	614	junction_2	283.154845741101	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCCTAATAATGGTTCA	NA	False	NA	-40	True	AATAAA	-11	NA	85567280	85561565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564223_85564317_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.37	chr8	-	1730	8	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-2	-31	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	477.288130151666	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567272	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85565097_85565280_85565422_85565585_85567122
ES.33439.39	chr8	-	1756	9	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-2	-31	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_1	457.413226060419	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567272	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562416_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.4	chr8	-	211	1	Intergenic	novelGene_27210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTTTTTTTTTAA	3213	False	NA	NA	False	NA	NA	NA	85556224	85556013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85556000_85556200
ES.33439.40	chr8	-	3473	7	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	1	-31	intron_retention	FALSE	canonical	2	14	junction_5	487.619956751385	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567293	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564220_85564317_85564397_85564635_85564764_85564901_85564941_85565097_85565585_85567122
ES.33439.41	chr8	-	2311	6	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-10	-31	intron_retention	FALSE	canonical	3	805	junction_3	238.545593126346	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567280	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85565280_85565422_85565585_85567122
ES.33439.43	chr8	-	1791	9	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	11	-31	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	435.716651047444	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567283	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565579_85567122
ES.33439.44	chr8	-	1750	9	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	10	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	469.559750590913	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567284	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564346_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.45	chr8	-	3616	6	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-11	-31	intron_retention	FALSE	canonical	3	614	junction_2	310.261438145316	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAGCCCTAATAATG	NA	False	NA	-45	True	AATAAA	-6	NA	85567281	85561570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564223_85564317_85564397_85564635_85565280_85565422_85565585_85567122
ES.33439.47	chr8	-	1317	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	3	522	3	187	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85567291	85562061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.48	chr8	-	1290	9	NNC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-4	187	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	468.151150804951	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85567274	85562061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564387_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.49	chr8	-	1278	9	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-9	151	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	440.346738377838	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATGTTTAAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	85567279	85562097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564076_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.5	chr8	-	5419	9	FSM	ENSMUSG00000003813.16_ENSMUSG00000053226.8	ENSMUST00000003911.13	2074	9	-36	-3309	-12	2676	multi-exon	FALSE	canonical	3	805	junction_3	189.238440862315	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAGGCTTATGTTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	85567306	85557971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.50	chr8	-	3068	6	NIC	ENSMUSG00000003813.16	novel	1842	9	NA	NA	-2	139	intron_retention	FALSE	canonical	3	614	junction_2	310.261438145316	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATATATATATTCATG	NA	False	NA	NA	False	NA	NA	NA	85567272	85562109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85562304_85562383_85564223_85564317_85564397_85564635_85565280_85565422_85565585_85567122
ES.33439.51	chr8	-	1027	9	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-3	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	451.103646626803	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCCTGAGTCAGAA	NA	False	NA	NA	False	NA	NA	NA	85567273	85562225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564941_85565185_85565280_85565422_85565585_85567122
ES.33439.52	chr8	-	2255	7	ISM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	1	1438	1	-470	5prime_fragment	FALSE	canonical	3	805	junction_1	212.524246982681	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGCACCATTTATTTC	NA	False	NA	NA	False	NA	NA	NA	85567269	85562718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.53	chr8	-	2798	4	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-4	-473	intron_retention	FALSE	canonical	3	805	junction_1	299.369708257569	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTTGGCACCATTTAT	NA	False	NA	NA	False	NA	NA	NA	85567298	85562721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564220_85564317_85565280_85565422_85565585_85567122
ES.33439.54	chr8	-	2243	7	NIC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	-9	-475	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	500.317565818617	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCACCTTGGCACCATTT	NA	False	NA	NA	False	NA	NA	NA	85567279	85562723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85564220_85564317_85564397_85564635_85564764_85564901_85564941_85565097_85565280_85565422_85565585_85567122
ES.33439.55	chr8	-	524	1	Genic_Genomic	ENSMUSG00000003813.16	novel	NA	NA	NA	NA	-11	-1854	mono-exon	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATAGTTTTGGTGGTCCG	NA	False	NA	NA	False	AATAAA	-12	NA	85567305	85566781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85566800_85567300
ES.33439.6	chr8	-	6351	7	Fusion	ENSMUSG00000003813.16_ENSMUSG00000053226.8	novel	1842	9	NA	NA	-4	2017	intron_retention	FALSE	canonical	3	614	junction_1	278.433365257989	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTCTGCAGTTTATTTA	NA	False	NA	NA	False	AAGAAA	-1	NA	85567274	85558630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.7	chr8	-	2717	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	16	-891	-8	-1	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTCCTCAGTGATTC	NA	False	NA	NA	False	AGTAAA	-21	NA	85567278	85560648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.33439.9	chr8	-	1360	9	NIC	ENSMUSG00000003813.16	novel	725	5	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	463.89270041681	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGATGTCCTCAGTGA	NA	False	NA	NA	False	AGTAAA	-18	NA	85567274	85560651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85560954_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ES.3344.1	chr10	+	2890	6	NNC	ENSMUSG00000055862.8	novel	475	9	NA	NA	-5288	3	intron_retention	FALSE	canonical	0	0	junction_1	11.8894911581615	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGAACAATTCTTTAAC	NA	False	NA	5	True	ATTAAA	-18	NA	80532729	80541210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80532890_80537527_80538964_80539042_80539115_80539563_80539763_80539872_80539921_80540235
ES.3344.10	chr10	+	1615	6	NNC	ENSMUSG00000055862.8	novel	1564	7	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_5	9.54986910905066	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538546	80541207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539763_80539872_80539933_80540251
ES.3344.11	chr10	+	1691	6	NIC	ENSMUSG00000055862.8	novel	1564	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	12	junction_5	5.27636238330917	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538566	80541207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539763_80539872_80540029_80540251
ES.3344.12	chr10	+	1309	6	NNC	ENSMUSG00000055862.8	novel	475	9	NA	NA	-44	-1	intron_retention	FALSE	canonical	0	0	junction_5	10.1587400793602	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGAGGAACAATTCTT	NA	False	NA	1	True	ATTAAA	-14	NA	80538848	80541206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540235
ES.3344.2	chr10	+	177	1	Intergenic	novelGene_2585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	80533067	80533244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80533100_80533200
ES.3344.3	chr10	+	173	2	Antisense	novelGene_ENSMUSG00000003348.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAACAGTAGT	NA	False	NA	NA	False	NA	NA	NA	80533068	80535319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80533225_80535302
ES.3344.4	chr10	+	158	1	Intergenic	novelGene_2586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAATAAATAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	80535141	80535299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80535100_80535300
ES.3344.5	chr10	+	1744	8	NNC	ENSMUSG00000055862.8	novel	1196	10	NA	NA	-136	2	intron_retention	FALSE	canonical	0	0	junction_7	8.64964314469749	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGGAACAATTCTTTAA	NA	False	NA	4	True	ATTAAA	-17	NA	80538421	80541209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540013_80540124_80540251
ES.3344.6	chr10	+	2098	5	NNC	ENSMUSG00000055862.8	novel	1564	7	NA	NA	-42	-1	intron_retention	FALSE	canonical	0	0	junction_4	10.6624340560681	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGAGGAACAATTCTT	NA	False	NA	1	True	ATTAAA	-14	NA	80538515	80541206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538794_80538882_80538964_80539042_80539763_80539872_80539921_80540235
ES.3344.7	chr10	+	1525	7	NNC	ENSMUSG00000055862.8	novel	1196	10	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_4	11	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538533	80541207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539697_80539763_80539872_80539921_80540235
ES.3344.8	chr10	+	1627	7	NIC	ENSMUSG00000055862.8	novel	1196	10	NA	NA	-23	0	intron_retention	FALSE	canonical	2	9	junction_4	6.42261628933256	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538534	80541207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80540029_80540251
ES.3344.9	chr10	+	1026	6	NNC	ENSMUSG00000055862.8	novel	1196	10	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_5	9.34665715643834	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGGAACAATTCTTT	NA	False	NA	2	True	ATTAAA	-15	NA	80538543	80541207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539921_80540845
ES.33440.1	chr8	-	2817	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	67	-700	-37	700	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTGGATGAATAGG	NA	False	NA	NA	False	TATAAA	-10	NA	85573496	85567778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.10	chr8	-	1809	8	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	39	-243	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	441.872268920348	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTGTGTCTCCTTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	85573524	85568721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85569474_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.12	chr8	-	1955	8	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-36	-243	intron_retention	FALSE	canonical	3	1093	junction_5	121.049829510371	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTGTGTCTCCTTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	85573495	85568721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.13	chr8	-	3966	6	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-36	-243	intron_retention	FALSE	canonical	3	1106	junction_5	104.516792909082	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTGTGTCTCCTTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	85573495	85568721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85569474_85569572_85571121_85571202_85571413_85571499_85572695_85572878_85572981_85573336
ES.33440.15	chr8	-	723	3	FSM	ENSMUSG00000003814.9	ENSMUST00000128028.2	854	3	-36	167	-36	146	multi-exon	FALSE	canonical	3	1106	junction_2	108	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATGTGCATATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	85573495	85572232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85572695_85572878_85572981_85573336
ES.33440.2	chr8	-	1800	9	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-36	-238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	435.168286413429	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCCTTCTCTGGG	NA	False	NA	-1	True	ATTAAA	-21	NA	85573495	85568716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571335_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.3	chr8	-	2044	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	-98	238	-98	-238	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTCCTTCTCTGGG	NA	False	NA	-1	True	ATTAAA	-21	NA	85573661	85568716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.6	chr8	-	1868	9	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-35	-241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	438.293779901107	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573494	85568719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571208_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ES.33440.7	chr8	-	1428	7	NNC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	857	-241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	487.367645850873	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85572598	85568719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85569384_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490
ES.33440.8	chr8	-	3311	6	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	68	241	-36	-241	intron_retention	FALSE	canonical	3	1284	junction_2	50.2219075703024	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573495	85568719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499
ES.33440.9	chr8	-	2857	7	NIC	ENSMUSG00000003814.9	novel	2184	9	NA	NA	-36	-242	intron_retention	FALSE	canonical	3	1106	junction_6	99.6550996632329	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTGTCTCCTTCTC	NA	False	NA	-5	True	ATTAAA	-17	NA	85573495	85568720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85572695_85572878_85572981_85573336
ES.33441.1	chr8	+	2192	15	Fusion	ENSMUSG00000087685.2_ENSMUSG00000003808.19	novel	1826	13	NA	NA	-10	0	multi-exon	FALSE	canonical	2	5	junction_1	228.72592992577	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85573806	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_85573950_85574698_85574925_85583619_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.11	chr8	+	5228	6	NIC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	583	junction_3	64.8444292133102	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583619	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85588060_85590686_85590989_85591065_85594968_85595494
ES.33441.13	chr8	+	2514	10	NIC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	551	junction_7	58.7041126285559	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583619	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85591182_85594005_85594278_85594378_85594548_85594637_85594716_85594852
ES.33441.14	chr8	+	5451	8	NIC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	583	junction_4	51.0629863152222	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583619	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85594716_85594852
ES.33441.15	chr8	+	1899	12	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_6	255.215902766253	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTGTTGTCATTCATT	NA	False	NA	35	True	AATAAA	-35	NA	85583621	85595883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590951_85591065_85591182_85594005_85594278_85594347_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.16	chr8	+	1895	12	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	2	junction_2	194.154237060629	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583621	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587662_85587755_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.17	chr8	+	1830	12	NIC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	23	junction_2	188.163108424316	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGACTCTGTTGTCATT	NA	False	NA	31	True	AATAAA	-31	NA	85583621	85595879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.18	chr8	+	2297	8	NIC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	551	junction_6	66.5367782293587	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583621	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85588060_85590686_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594968_85595494
ES.33441.19	chr8	+	2587	9	ISM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	-25	1	0	-1	intron_retention	FALSE	canonical	3	23	junction_2	209.041824463431	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583623	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177
ES.33441.2	chr8	+	2202	15	Fusion	ENSMUSG00000087685.2_ENSMUSG00000003808.19	novel	1826	13	NA	NA	2	-7	multi-exon	FALSE	canonical	0	0	junction_6	297.008769540015	360	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGACTCTGTTGTCAT	NA	False	NA	30	True	AATAAA	-30	NA	85573818	85595878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_85573950_85574698_85574925_85583619_85583811_85587534_85587673_85587755_85587855_85587940_85588058_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594347_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.20	chr8	+	2410	11	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	1	-20	intron_retention	FALSE	canonical	0	0	junction_10	193.991984370489	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTGCCTTTTGTTAGG	NA	False	NA	17	True	AATAAA	-17	NA	85583624	85595865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85595353_85595494
ES.33441.21	chr8	+	2301	8	NIC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	583	junction_4	60.0401226392036	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583632	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85591182_85594005_85594968_85595494
ES.33441.23	chr8	+	2029	11	NIC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	551	junction_8	59.9824140894646	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583636	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594968_85595494
ES.33441.25	chr8	+	2433	11	ISM	ENSMUSG00000003808.19	ENSMUST00000129595.8	1920	12	14	0	0	0	intron_retention	FALSE	canonical	3	583	junction_4	48.4669990818495	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583637	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852
ES.33441.26	chr8	+	2637	9	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	0	-23	intron_retention	FALSE	canonical	3	13	junction_7	215.22513648503	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTGGTGCCTTTTGTT	NA	False	NA	14	True	AATAAA	-14	NA	85583637	85595862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587855_85587940_85588060_85590686_85590780_85590859_85591182_85594005_85594091_85594177_85594278_85594347_85594548_85594637
ES.33441.27	chr8	+	1799	14	NNC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	275.656376435994	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583642	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85588459_85588545_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.28	chr8	+	1823	12	NNC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	13	junction_8	251.69435747902	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGACTCTGTTGTCATT	NA	False	NA	31	True	AATAAA	-31	NA	85583644	85595879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587587_85587755_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594347_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.29	chr8	+	2296	8	NIC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	583	junction_3	57.0080552847309	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583644	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594968_85595494
ES.33441.3	chr8	+	2082	15	Fusion	ENSMUSG00000087685.2_ENSMUSG00000003808.19	novel	1708	13	NA	NA	34	-7	multi-exon	FALSE	canonical	0	0	junction_2	294.702314347262	360	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGACTCTGTTGTCAT	NA	False	NA	30	True	AATAAA	-30	NA	85573850	85595878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_85573950_85574698_85574925_85583623_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594347_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.30	chr8	+	1775	12	NNC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_6	253.906307962485	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583644	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590951_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.31	chr8	+	1939	11	NIC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	23	junction_2	192.954424670698	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583644	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594968_85595494
ES.33441.32	chr8	+	2050	11	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	13	junction_9	195.748307783235	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGACTCTGTTGTCATT	NA	False	NA	31	True	AATAAA	-31	NA	85583644	85595879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594347_85594968_85595494
ES.33441.33	chr8	+	1781	13	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	186.16411144173	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTGTTGTCATTCAT	NA	False	NA	34	True	AATAAA	-34	NA	85583647	85595882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587662_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.35	chr8	+	1703	13	NNC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.262673821419	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583648	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583806_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.36	chr8	+	4632	11	NIC	ENSMUSG00000003808.19	novel	1708	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	23	junction_2	197.336793325523	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85583648	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.37	chr8	+	1894	12	FSM	ENSMUSG00000003808.19	ENSMUST00000129595.8	1920	12	27	-1	2	0	multi-exon	FALSE	canonical	3	583	junction_4	51.0548238790647	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583650	85595886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.39	chr8	+	1652	12	NIC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	192.91753044687	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583661	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.4	chr8	+	6712	10	NNC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	-4613	1	intron_retention	TRUE	non_canonical	0	0	junction_1	209.376381513776	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTCATTCATTTCAT	NA	False	NA	39	True	AATAAA	-39	NA	85579004	85595887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85580532_85580664_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85591182_85594005_85594091_85594177_85594968_85595494
ES.33441.40	chr8	+	5013	8	NIC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	13	-7	intron_retention	FALSE	canonical	3	583	junction_4	56.1270424836298	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGACTCTGTTGTCAT	NA	False	NA	30	True	AATAAA	-30	NA	85583661	85595878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85594968_85595494
ES.33441.42	chr8	+	4438	8	NNC	ENSMUSG00000003808.19	novel	1920	12	NA	NA	129	0	intron_retention	FALSE	non_canonical	0	0	junction_6	231.011440656704	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583777	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85592375_85593363_85594091_85594177
ES.33441.43	chr8	+	1635	12	ISM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	3916	-1	3885	1	3prime_fragment	FALSE	canonical	3	551	junction_8	48.7742311044952	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTCATTCATTTCAT	NA	False	NA	39	True	AATAAA	-39	NA	85587533	85595887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.44	chr8	+	4029	3	ISM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	8019	1	-2524	-1	intron_retention	FALSE	canonical	3	551	junction_2	34.5	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTTGTCATTCATTT	NA	False	NA	36	True	AATAAA	-36	NA	85591667	85595884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85594091_85594177_85594278_85594378
ES.33441.5	chr8	+	4203	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	-2378	1	-2378	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85581239	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.6	chr8	+	2167	13	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-5	-7	intron_retention	FALSE	canonical	0	0	junction_4	245.697250470755	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGACTCTGTTGTCAT	NA	False	NA	30	True	AATAAA	-30	NA	85583612	85595878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85588463_85588671_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594968_85595494
ES.33441.7	chr8	+	1825	13	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	186.278838185006	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583613	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594274_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ES.33441.9	chr8	+	1939	12	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	190.943027286731	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583617	85595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85583811_85587534_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594347_85594548_85594637_85594716_85594852_85594968_85595494
ES.33442.1	chr8	-	201	1	Intergenic	novelGene_27211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTCGGGAG	NA	False	NA	NA	False	NA	NA	NA	85585935	85585734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85585700_85585900
ES.33443.1	chr8	+	1617	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	68	1	-14	-1	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTGTGCTGTTCTCTT	NA	False	NA	NA	False	CATAAA	-13	NA	85598807	85614849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ES.33443.10	chr8	+	905	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	103	678	21	87	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTAAATCTGATCCG	NA	False	NA	NA	False	NA	NA	NA	85598842	85614172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ES.33443.11	chr8	+	3324	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	23	2108	intron_retention	FALSE	non_canonical	0	0	junction_4	731.438437259077	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACACTGA	NA	False	NA	NA	False	NA	NA	NA	85598844	85616958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763_85615575_85615785
ES.33443.12	chr8	+	1442	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	23	-3	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	788.288159382229	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTGTGCTGTTCTC	NA	False	NA	NA	False	CATAAA	-11	NA	85598844	85614847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85598883_85599330_85599462_85612563_85612753_85613763
ES.33443.14	chr8	+	1421	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	26	-762	26	-3	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTGTGCTGTTCTC	NA	False	NA	NA	False	CATAAA	-11	NA	85598847	85614847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
ES.33443.15	chr8	+	1218	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	26	-51	intron_retention	FALSE	canonical	3	1047	junction_1	431.92772029074	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598847	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85599462_85610059_85610214_85612563_85612753_85613763
ES.33443.16	chr8	+	2124	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	33	6677	intron_retention	FALSE	canonical	0	0	junction_4	526.671861788723	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	85598854	85621527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85619887
ES.33443.17	chr8	+	735	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	36	-51	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	717.273483407828	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598857	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85598883_85599348_85599462_85610059_85610214_85612570_85612753_85613763
ES.33443.18	chr8	+	436	2	Antisense	novelGene_ENSMUSG00000003809.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTAGCACCACAGTGT	NA	False	NA	NA	False	NA	NA	NA	85620011	85626747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_85620210_85626509
ES.33443.2	chr8	+	661	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	-14	38	-14	-28	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGAAAGACTGATGATC	NA	False	NA	53	True	ATTAAA	-36	NA	85598807	85614047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
ES.33443.3	chr8	+	792	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	77	817	-5	-42	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTATTCCAGAATTGG	NA	False	NA	39	True	ATTAAA	-22	NA	85598816	85614033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ES.33443.4	chr8	+	2566	1	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	8	-11236	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGAGTATCATGGTTT	NA	False	NA	NA	False	NA	NA	NA	85598829	85601395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85598800_85601400
ES.33443.5	chr8	+	630	4	NIC	ENSMUSG00000003824.13	novel	929	5	NA	NA	12	-51	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	788.288159382229	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598833	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85598883_85599330_85599462_85612563_85612753_85613763
ES.33443.6	chr8	+	1078	3	NIC	ENSMUSG00000003824.13	novel	685	4	NA	NA	12	-51	intron_retention	FALSE	canonical	3	832	junction_1	576	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598833	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85599462_85612563_85612753_85613763
ES.33443.7	chr8	+	779	5	FSM	ENSMUSG00000003824.13	ENSMUST00000170296.2	929	5	99	51	17	-51	multi-exon	FALSE	canonical	3	66	junction_1	678.634428466461	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598838	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85598883_85599330_85599462_85610059_85610214_85612563_85612753_85613763
ES.33443.8	chr8	+	1594	5	NNC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	855.221426006154	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGTGTGCTGTTCTC	NA	False	NA	NA	False	CATAAA	-11	NA	85598842	85614847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85598887_85599348_85599462_85604517_85604682_85612563_85612753_85613763
ES.33443.9	chr8	+	3107	4	NIC	ENSMUSG00000003824.13	novel	1686	5	NA	NA	21	-51	intron_retention	FALSE	canonical	3	1047	junction_2	386.86288124979	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTCATACTTTATTC	NA	False	NA	30	True	ATTAAA	-13	NA	85598842	85614024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85598883_85599348_85599462_85610059_85612753_85613763
ES.33444.1	chr8	-	1659	2	Antisense	novelGene_ENSMUSG00000003824.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCAAAAAAAAAAAAAAAGA	5260	False	NA	NA	False	NA	NA	NA	85601952	85600035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85600067_85600324
ES.33445.1	chr8	-	2695	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	149	-730	145	730	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTTCTGCCATGTAG	NA	False	NA	NA	False	NA	NA	NA	85620401	85612291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.10	chr8	-	2312	8	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	136	-189	intron_retention	FALSE	canonical	3	233	junction_5	20.2867202969865	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGGACTAGGTCTACT	NA	False	NA	-8	True	AATAAA	-20	NA	85620410	85613210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617772_85619030_85619794_85620076_85620104_85620183
ES.33445.11	chr8	-	2837	13	NNC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	-9517	-189	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	100.265065368419	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGGACTAGGTCTACT	NA	False	NA	-8	True	AATAAA	-20	NA	85630067	85613210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85622623_85622938_85629289
ES.33445.14	chr8	-	3400	9	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	135	-190	intron_retention	FALSE	canonical	3	233	junction_4	20.6212117733173	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTGGACTAGGTCTAC	NA	False	NA	-9	True	AATAAA	-19	NA	85620411	85613211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85615317_85615890_85616017_85616210_85616315_85617339_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
ES.33445.15	chr8	-	1872	11	NNC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	135	-195	intron_retention	FALSE	canonical	0	0	junction_4	83.0250564588787	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620411	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617332_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.17	chr8	-	3718	8	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	135	-195	intron_retention	FALSE	canonical	3	204	junction_7	27.2643895727652	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620411	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619794_85620076_85620314_85620370
ES.33445.18	chr8	-	1865	11	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	135	-195	intron_retention	FALSE	canonical	3	204	junction_10	28.6323243904507	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620411	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.2	chr8	-	2139	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	-22	-3	-22	3	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTGGCTTCTCAATCT	NA	False	NA	-2	True	AATAAA	-12	NA	85620572	85613018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.20	chr8	-	4658	6	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	135	-195	intron_retention	FALSE	canonical	3	237	junction_3	21.918029108476	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620411	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85613683_85615155_85615317_85615890_85619523_85619649_85619794_85620076_85620104_85620183
ES.33445.21	chr8	-	1866	11	NNC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	136	-195	intron_retention	FALSE	canonical	0	0	junction_4	82.1925179076539	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620410	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617332_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620314_85620370
ES.33445.22	chr8	-	1978	12	NNC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	145	-195	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	76.3902551008973	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620401	85613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85613891_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.24	chr8	-	3300	7	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	143	-197	intron_retention	FALSE	canonical	3	233	junction_4	25.190937523906	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCCTAGGACTGGACTA	NA	False	NA	-16	True	AATAAA	-12	NA	85620403	85613218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85617772_85619030_85619202_85619459_85619523_85619649
ES.33445.25	chr8	-	2037	3	NIC	ENSMUSG00000003809.15	novel	408	4	NA	NA	135	-469	intron_retention	FALSE	canonical	3	204	junction_2	26	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAACAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	85620411	85618034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85619794_85620076_85620314_85620370
ES.33445.26	chr8	-	5104	1	Intergenic	novelGene_27212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	85626881	85621777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85621800_85626900
ES.33445.3	chr8	-	1762	7	NNC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	112	2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	97.8689600094603	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGGCTTCTCAATC	NA	False	NA	-3	True	AATAAA	-11	NA	85619183	85613019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85613891_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030
ES.33445.4	chr8	-	3499	7	NIC	ENSMUSG00000003809.15	novel	2167	11	NA	NA	143	2	intron_retention	FALSE	canonical	3	233	junction_4	25.190937523906	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTGGCTTCTCAATC	NA	False	NA	-3	True	AATAAA	-11	NA	85620403	85613019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85617772_85619030_85619202_85619459_85619523_85619649
ES.33445.5	chr8	-	5043	8	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	141	-1	intron_retention	FALSE	canonical	3	204	junction_7	27.7782766395114	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATACTTTGGCTTCTCA	NA	False	NA	-6	True	AATAAA	-8	NA	85620405	85613022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85615317_85615890_85616017_85616210_85616315_85617339_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33445.6	chr8	-	1944	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	-12	182	-12	-182	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGGTCTACTGGTAACC	NA	False	NA	-1	True	AATAAA	-27	NA	85620562	85613203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ES.33446.1	chr8	+	156	1	Intergenic	novelGene_27213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	85630689	85630845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85630700_85630800
ES.33447.1	chr8	+	178	1	Intergenic	novelGene_27214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAATTGCTGCATGC	NA	False	NA	NA	False	NA	NA	NA	85634624	85634802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85634600_85634800
ES.33447.2	chr8	+	371	1	Intergenic	novelGene_27215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTAAAAGAGTTGTA	NA	False	NA	NA	False	NA	NA	NA	85634626	85634997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85634600_85635000
ES.33448.1	chr8	+	2842	1	NIC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	-32	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGAGACTAGTTTTGA	NA	False	NA	5	True	NA	NA	NA	85635243	85638085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85635200_85638100
ES.33448.10	chr8	+	4342	5	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	17	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	45.5219727164806	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTTTTCTCTTTCATC	NA	False	NA	NA	False	NA	NA	NA	85635292	85641147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85636400_85636599_85637314_85640490_85640563
ES.33448.11	chr8	+	4446	8	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	40.4545600466923	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTTTTCTCTTTCATC	NA	False	NA	NA	False	NA	NA	NA	85635320	85641147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637821_85637964_85640490_85640531
ES.33448.12	chr8	+	5014	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_2	46.27724422795	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGAGTGGGGGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	85635320	85649546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635832_85636400_85636599_85637314_85640158_85647022_85647134_85647414_85648009_85648675
ES.33448.13	chr8	+	1216	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	173	326	2	-318	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTGGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	85635361	85637772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ES.33448.15	chr8	+	1632	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.0864912962436	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTAACCTTTTTCTTA	NA	False	NA	8	True	AATACA	-18	NA	85635365	85638336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637821_85637964
ES.33448.16	chr8	+	1400	6	NNC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	15	-163	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.7970412906219	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCAGGTGGATCT	NA	False	NA	NA	False	NA	NA	NA	85635374	85637927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635571_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ES.33448.17	chr8	+	4514	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	20	-18	intron_retention	FALSE	non_canonical	0	0	junction_6	34.0864912962436	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAATAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	85635379	85641132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85640490_85640533
ES.33448.18	chr8	+	1759	4	NIC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	38	-10	intron_retention	FALSE	canonical	3	87	junction_2	2.49443825784929	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACTCAGAGACTAGT	NA	False	NA	0	True	NA	NA	NA	85635397	85638080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85635500_85635613_85635792_85635885_85636599_85637314
ES.33448.19	chr8	+	1022	1	NIC	ENSMUSG00000003812.14	novel	1958	6	NA	NA	850	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGTAACCTTTTTCTT	NA	False	NA	7	True	AATACA	-17	NA	85637313	85638335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85637300_85638300
ES.33448.20	chr8	+	2631	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-1595	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAATAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	85638424	85641132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85640484_85640560
ES.33448.21	chr8	+	2202	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-1134	-18	intron_retention	TRUE	non_canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAATAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	85638885	85641132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85640512_85640556
ES.33448.22	chr8	+	1236	4	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-50	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.2048578494609	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGAGTGGGGGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	85639969	85649546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85640158_85647022_85647134_85648065_85648132_85648675
ES.33448.23	chr8	+	1132	2	ISM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-50	1578	-50	-1578	5prime_fragment	FALSE	canonical	3	99	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTGGCTTGAGGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	85639969	85647966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85640158_85647022
ES.33448.24	chr8	+	1171	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-49	-4	-49	4	multi-exon	FALSE	canonical	3	99	junction_1	1.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGAGTGGGGGTGTTTG	NA	False	NA	8	True	AATAAA	-20	NA	85639970	85649548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85640158_85647022_85647134_85648675
ES.33448.25	chr8	+	483	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-24	-230	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATAAAAACTAAAAC	NA	False	NA	NA	False	NA	NA	NA	85639995	85640920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85640158_85640599
ES.33448.26	chr8	+	384	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4654	230	-16	-230	3prime_fragment	FALSE	canonical	3	74	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATAAAAACTAAAAC	NA	False	NA	NA	False	NA	NA	NA	85640003	85640920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85640158_85640690
ES.33448.27	chr8	+	2213	2	ISM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-15	462	-15	-462	intron_retention	FALSE	canonical	3	99	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATAATGTAAACAATGA	NA	False	NA	NA	False	NA	NA	NA	85640004	85649082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85640158_85647022
ES.33448.28	chr8	+	658	4	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	46.4494946749214	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGAGTGGGGGTGTT	NA	False	NA	6	True	AATAAA	-18	NA	85640006	85649546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85640158_85647022_85647134_85648675_85648722_85649196
ES.33448.29	chr8	+	593	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4657	18	-13	-18	3prime_fragment	FALSE	canonical	3	74	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAATAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	85640006	85641132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85640158_85640690
ES.33448.3	chr8	+	4108	8	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.8111479313271	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGAGAGGTGGTTCGGT	NA	False	NA	NA	False	NA	NA	NA	85635275	85641164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637821_85637964_85640158_85640599
ES.33448.30	chr8	+	1373	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	-9	-246	-9	246	multi-exon	FALSE	canonical	3	99	junction_1	1.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	85640010	85649790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85640158_85647022_85647134_85648675
ES.33448.31	chr8	+	1120	2	NNC	ENSMUSG00000003812.14	novel	1118	3	NA	NA	2716	-1579	intron_retention	FALSE	canonical	2	4	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGTCTGGCTTGAGGTC	NA	False	NA	NA	False	AATAAA	-14	NA	85642735	85647965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85642913_85647022
ES.33448.4	chr8	+	1548	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	88	79	1	-71	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAGAAGAAGAA	NA	False	NA	-61	True	NA	NA	NA	85635276	85638019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ES.33448.5	chr8	+	1333	5	NNC	ENSMUSG00000003812.14	novel	1715	6	NA	NA	1	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.5449211470848	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGCTCAGGTGGATCT	NA	False	NA	NA	False	NA	NA	NA	85635276	85637927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85636154_85636320_85636444_85636599_85637314
ES.33448.7	chr8	+	1621	4	NIC	ENSMUSG00000003812.14	novel	1958	6	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	42.928881756795	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTAACCTTTTTCTTAA	NA	False	NA	9	True	AATACA	-19	NA	85635277	85638337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85635500_85635613_85635792_85636400_85636599_85637314
ES.33448.8	chr8	+	1401	7	NNC	ENSMUSG00000003812.14	novel	4073	7	NA	NA	4	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.0864912962436	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAGAAGAAGAA	NA	False	NA	-61	True	NA	NA	NA	85635279	85638019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314_85637821_85637964
ES.33448.9	chr8	+	1856	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	98	-239	11	0	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTAACCTTTTTCTTAA	NA	False	NA	9	True	AATACA	-19	NA	85635286	85638337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ES.33449.1	chr8	+	942	1	Antisense	novelGene_ENSMUSG00000053693.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATACTCTCTGCTGTCA	NA	False	NA	NA	False	NA	NA	NA	85649924	85650866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_85649900_85650900
ES.3345.1	chr10	-	3206	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	22	-546	-5	546	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCGGCCTACAGTTTTG	9139	False	NA	NA	False	NA	NA	NA	80537667	80520540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ES.3345.2	chr10	-	1147	1	Genic_Genomic	ENSMUSG00000003348.11	novel	NA	NA	NA	NA	7457	120	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAGAAAGCAGACTCAG	NA	False	NA	NA	False	NA	NA	NA	80522113	80520966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_80521000_80522100
ES.3345.3	chr10	-	2822	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	-139	-1	-17	1	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGGCTGCTCCTTGTTGT	8978	False	NA	0	True	AATAAA	-17	NA	80537828	80521085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ES.3345.4	chr10	-	2159	5	NNC	ENSMUSG00000003348.11	novel	2682	4	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1330383466387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGGGCTGCTCCTTGTT	9146	False	NA	-2	True	AATAAA	-15	NA	80537660	80521087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80521771_80522263_80523008_80525685_80525889_80526902_80527402_80537630
ES.3345.5	chr10	-	2814	4	NNC	ENSMUSG00000003348.11	novel	2682	4	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.4722086720835	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATACTGCGGGCTGCTCCT	9138	False	NA	-6	True	AATAAA	-11	NA	80537668	80521091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80523008_80525685_80526047_80526902_80527402_80537630
ES.33450.1	chr8	-	2773	9	ISM	ENSMUSG00000053693.17	ENSMUST00000109741.9	4872	26	18561	1	5322	-1	3prime_fragment	FALSE	canonical	1	2	junction_8	3.38193731461717	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGGGTTCACACCTC	NA	False	NA	0	True	AATAAA	-19	NA	85645421	85638532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85639871_85639948_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
ES.33450.2	chr8	-	2823	8	NIC	ENSMUSG00000053693.17	novel	4872	26	NA	NA	5348	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	3.54562104171167	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTTGGGGTTCACACC	NA	False	NA	-2	True	AATAAA	-17	NA	85645395	85638534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
ES.33450.3	chr8	-	1633	3	NNC	ENSMUSG00000053693.17	novel	4821	14	NA	NA	10388	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTTGGGGTTCACACC	NA	False	NA	-2	True	AATAAA	-17	NA	85640355	85638534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85639871_85639948_85640137_85640246
ES.33450.4	chr8	-	1718	2	NNC	ENSMUSG00000053693.17	novel	4821	14	NA	NA	9958	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTCTTGGGGTTCACA	NA	False	NA	-4	True	AATAAA	-15	NA	85640785	85638536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85640137_85640667
ES.33450.5	chr8	-	163	1	Intergenic	novelGene_27216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGCAGAGTCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	85641903	85641740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85641700_85641900
ES.33450.6	chr8	-	1516	9	ISM	ENSMUSG00000053693.17	ENSMUST00000109741.9	4872	26	13388	5743	149	3739	internal_fragment	FALSE	canonical	0	0	junction_3	1.93649167310371	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCACGCGCTATTCA	NA	False	NA	NA	False	NA	NA	NA	85650594	85644274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85644604_85644681_85644861_85645298_85645409_85646988_85647112_85647243_85647346_85647425_85647592_85647728_85647862_85647968_85648108_85650359
ES.33451.1	chr8	-	179	1	Intergenic	novelGene_27217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	85666949	85666770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85666800_85666900
ES.33452.1	chr8	+	1243	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	-257	514	-233	9	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGTGTGTGTTTAGT	NA	False	NA	22	True	AATAAA	-22	NA	85695982	85700949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.10	chr8	+	4051	3	FSM	ENSMUSG00000005161.16	ENSMUST00000138748.7	864	3	1	-3188	1	2	multi-exon	FALSE	canonical	3	3785	junction_2	120	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTGTGTTGGTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	85696323	85700942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696868_85696974_85697064
ES.33452.11	chr8	+	3562	5	FSM	ENSMUSG00000005161.16	ENSMUST00000143402.3	993	5	1	-2570	1	13	multi-exon	FALSE	canonical	3	3496	junction_3	263.896760116527	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTCGGCAGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	85696323	85701302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190
ES.33452.12	chr8	+	885	6	NNC	ENSMUSG00000005161.16	novel	1500	6	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1580.92256609867	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696324	85700944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85696392_85696868_85696974_85697075_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.13	chr8	+	1482	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	109	21	2	-21	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGAGTTCAAGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85696324	85701442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.15	chr8	+	1263	5	FSM	ENSMUSG00000005161.16	ENSMUST00000164807.2	1175	5	-432	344	40	5	multi-exon	FALSE	canonical	3	3496	junction_2	252.757171015977	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTGTTGGTGTGTGTT	NA	False	NA	18	True	AATAAA	-18	NA	85696435	85700945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.16	chr8	+	1721	5	FSM	ENSMUSG00000005161.16	ENSMUST00000164807.2	1175	5	-398	-148	-16	-26	multi-exon	FALSE	canonical	3	3496	junction_2	252.757171015977	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCCCTGTGAGTTCAA	NA	False	NA	NA	False	AATAAA	-11	NA	85696469	85701437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.2	chr8	+	1314	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	12	174	12	0	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATAGGGGT	NA	False	NA	NA	False	NA	NA	NA	85696251	85701289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.3	chr8	+	1035	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	58	519	34	4	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696273	85700944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.4	chr8	+	1735	4	NIC	ENSMUSG00000005161.16	novel	1500	6	NA	NA	34	4	intron_retention	FALSE	canonical	3	3920	junction_3	114.619176212166	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696273	85700944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85696392_85696868_85698039_85698190_85698322_85700628
ES.33452.5	chr8	+	1375	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	61	176	37	-2	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAAAAAAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	85696276	85701287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.6	chr8	+	1437	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	44	19	-39	-19	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGAGTTCAAGTTTGCG	NA	False	NA	NA	False	AATAAA	-18	NA	85696283	85701444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.7	chr8	+	908	6	NNC	ENSMUSG00000005161.16	novel	1612	6	NA	NA	-23	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1556.40642507026	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696299	85700944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85696392_85696881_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ES.33452.9	chr8	+	1053	6	NNC	ENSMUSG00000005161.16	novel	1612	6	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	1746.64084459284	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGTGTTGGTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	85696322	85700944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698106_85698190_85698322_85700628
ES.33453.1	chr8	+	2914	22	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-14940	2	intron_retention	FALSE	canonical	0	0	junction_1	93.0133728468368	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	1281	False	NA	20	True	AATAAA	-16	NA	85702291	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85702760_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.11	chr8	+	2598	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-20	2	intron_retention	FALSE	non_canonical	0	0	junction_13	92.7084034624821	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717211	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723875_85724013_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.12	chr8	+	2983	16	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-19	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	131.564872042485	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGGAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717212	85726332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719791_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85724078_85724628_85724767_85724832_85724921_85725118_85725958_85726157
ES.33453.13	chr8	+	3649	20	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-18	2	intron_retention	FALSE	canonical	3	15	junction_16	111.914614266532	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717213	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.14	chr8	+	2619	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	-32	-7	-18	7	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTATCTGTATGTTG	NA	False	NA	25	True	AATAAA	-21	NA	85717213	85729985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.16	chr8	+	2420	20	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_3	96.3874912862364	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85717219	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.17	chr8	+	3822	20	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-11	0	intron_retention	FALSE	canonical	2	8	junction_1	136.873053180605	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717220	85729978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717558_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.18	chr8	+	4259	15	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-8	-588	intron_retention	FALSE	non_canonical	0	0	junction_14	105.03381379735	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGAGGATGGCTAGGG	NA	False	NA	NA	False	NA	NA	NA	85717223	85727469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725958_85726157
ES.33453.19	chr8	+	2587	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-7	1	intron_retention	FALSE	canonical	3	10	junction_19	91.1361643559501	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGCGTTTTTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	85717224	85729973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729141_85729244_85729315_85729388_85729493
ES.33453.2	chr8	+	2632	22	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-14937	2	intron_retention	FALSE	canonical	0	0	junction_1	93.0133728468368	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	1284	False	NA	20	True	AATAAA	-16	NA	85702294	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85702481_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.20	chr8	+	3876	20	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-6	2	intron_retention	FALSE	canonical	3	109	junction_17	76.1249519556453	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	NA	False	NA	20	True	AATAAA	-16	NA	85717225	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.21	chr8	+	3543	16	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-6	552	intron_retention	FALSE	non_canonical	0	0	junction_15	100.935534982593	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTCATGTTGAG	NA	False	NA	NA	False	NA	NA	NA	85717225	85726887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725958_85726157
ES.33453.22	chr8	+	3670	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-4	2	intron_retention	FALSE	canonical	3	109	junction_18	74.5002516774272	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717227	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.23	chr8	+	2986	16	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-4	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	100.935534982593	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAGAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	85717227	85726334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725958_85726159
ES.33453.24	chr8	+	2902	17	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-4	17	intron_retention	FALSE	non_canonical	0	0	junction_16	131.459119120737	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATC	NA	False	NA	NA	False	NA	NA	NA	85717227	85726352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720049_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725962_85726162
ES.33453.25	chr8	+	2940	17	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-4	17	intron_retention	FALSE	non_canonical	0	0	junction_16	98.3125595994733	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATC	NA	False	NA	NA	False	NA	NA	NA	85717227	85726352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725958_85726157
ES.33453.27	chr8	+	2549	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_6	94.0720468577143	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATGAGCGTTTTTGC	NA	False	NA	11	True	AATAAA	-7	NA	85717233	85729971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720307_85721097_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.29	chr8	+	2544	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2	-81	intron_retention	FALSE	canonical	2	3	junction_5	108.708706028726	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTACTCTAGACACA	NA	False	NA	6	True	AATAAA	-16	NA	85717233	85729891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720161_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.3	chr8	+	3771	21	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-13162	2	intron_retention	TRUE	canonical	0	0	junction_1	136.723662911729	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	3059	False	NA	14	True	AATAAA	-10	NA	85704069	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85704329_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722368_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.30	chr8	+	2604	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_16	164.389284123674	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717233	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718086_85719812_85719864_85719952_85719992_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725011_85725154_85727787_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.31	chr8	+	2419	16	FSM	ENSMUSG00000052566.9	ENSMUST00000210326.2	3080	16	-37	698	2	-698	multi-exon	FALSE	canonical	3	335	junction_11	30.1194658356058	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGTGAGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	85717233	85725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
ES.33453.32	chr8	+	2708	21	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	3	-1	intron_retention	FALSE	canonical	3	335	junction_10	40.1121864275684	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717234	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.33	chr8	+	2897	15	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	138.204097077401	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGGAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717234	85726332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85724007_85724078_85724628_85724767_85724832_85725958_85726157
ES.33453.34	chr8	+	2590	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_16	92.9077761830701	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85717243	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724931_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.35	chr8	+	2649	23	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_17	119.841053479905	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717244	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85725866_85725936_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.37	chr8	+	2910	11	NIC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	2	-723	intron_retention	FALSE	canonical	1	4	junction_9	120.520703615603	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717247	85725612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85724007_85724078_85724628
ES.33453.39	chr8	+	3086	15	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	4	1	intron_retention	FALSE	non_canonical	0	0	junction_14	104.471947215997	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	85717249	85726336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725958_85726157
ES.33453.4	chr8	+	2946	22	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-579	2	intron_retention	FALSE	canonical	0	0	junction_1	93.0133728468368	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	NA	False	NA	20	True	AATAAA	-16	NA	85716652	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717153_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.42	chr8	+	2441	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	8	-81	intron_retention	FALSE	canonical	3	10	junction_18	122.053789371736	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTACTCTAGACACA	NA	False	NA	6	True	AATAAA	-16	NA	85717253	85729891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85727783_85727867_85727949_85728054_85729141_85729244_85729315_85729388_85729493
ES.33453.43	chr8	+	2474	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	11	-1	intron_retention	FALSE	canonical	1	1	junction_5	92.8293731369915	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717256	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85719992_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.44	chr8	+	2744	20	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	11	-83	intron_retention	FALSE	canonical	3	335	junction_11	40.5285030168486	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAATGTACTCTAGACA	NA	False	NA	4	True	AATAAA	-14	NA	85717256	85729889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.47	chr8	+	3561	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	11	3	intron_retention	FALSE	canonical	0	0	junction_16	125.810919637367	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTTTGCCTATCTGTAT	NA	False	NA	21	True	AATAAA	-17	NA	85717256	85729981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85719992_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724925_85725118_85725154_85727783_85727867_85727949_85729244_85729315_85729388_85729493
ES.33453.48	chr8	+	2644	13	NIC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	11	-723	intron_retention	FALSE	canonical	3	335	junction_9	32.6198644319003	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717256	85725612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628
ES.33453.5	chr8	+	2843	15	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-533	-698	intron_retention	FALSE	canonical	0	0	junction_1	104.844515588464	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGTGAGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	85716698	85725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717153_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
ES.33453.51	chr8	+	3538	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	11	978	intron_retention	FALSE	canonical	3	10	junction_19	91.1361643559501	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTTGTTGTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	85717256	85730956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729141_85729244_85729315_85729388_85729493
ES.33453.52	chr8	+	2263	15	NIC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	11	-698	intron_retention	FALSE	canonical	3	8	junction_4	102.977533709929	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGTGAGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	85717256	85725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832
ES.33453.53	chr8	+	5197	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_16	95.0555626988763	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717256	85729978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725958_85726157_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.54	chr8	+	2812	12	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	11	-698	intron_retention	FALSE	canonical	2	7	junction_3	110.980975214242	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTGTGAGCCACCAT	NA	False	NA	NA	False	NA	NA	NA	85717256	85725637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718086_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85724078_85724628
ES.33453.55	chr8	+	2736	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	1	intron_retention	FALSE	canonical	2	8	junction_1	107.774582087882	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGCGTTTTTGCCT	NA	False	NA	13	True	AATAAA	-9	NA	85717257	85729973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717558_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.56	chr8	+	3746	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	2	intron_retention	FALSE	canonical	2	16	junction_16	109.227011311305	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	NA	False	NA	20	True	AATAAA	-16	NA	85717257	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725021_85725118_85725154_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.57	chr8	+	2666	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	-2	intron_retention	FALSE	canonical	2	16	junction_16	89.819471246306	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85717257	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725021_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.58	chr8	+	2582	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_13	92.7084034624821	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717257	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85723992_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.6	chr8	+	3704	21	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	-263	0	intron_retention	FALSE	canonical	0	0	junction_1	111.681634568984	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85716968	85729978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717153_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85729244_85729315_85729388_85729493
ES.33453.61	chr8	+	4027	17	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	12	-588	intron_retention	FALSE	non_canonical	0	0	junction_16	98.3125595994733	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGAGGATGGCTAGGG	NA	False	NA	NA	False	NA	NA	NA	85717257	85727469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725958_85726157
ES.33453.63	chr8	+	4063	16	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	-12	-617	intron_retention	FALSE	non_canonical	0	0	junction_15	100.935534982593	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717258	85727440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725958_85726157
ES.33453.64	chr8	+	2667	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	1	junction_5	94.9569771001584	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717261	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85719992_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.67	chr8	+	2330	17	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	5	-723	intron_retention	FALSE	canonical	2	8	junction_1	96.2602064393693	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717275	85725612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717558_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118
ES.33453.68	chr8	+	2589	21	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	5	-27	intron_retention	FALSE	canonical	3	335	junction_11	31.7152959942044	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTGCTTTTAAAATAAA	NA	False	NA	-15	True	AATAAA	-20	NA	85717275	85729945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729388_85729493
ES.33453.69	chr8	+	2589	21	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	455	2	430	-2	3prime_fragment	FALSE	canonical	3	335	junction_10	40.6730869248942	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85717700	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.7	chr8	+	2888	20	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	109	junction_17	70.4649772538854	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717203	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727952_85728054_85729132_85729388_85729493
ES.33453.70	chr8	+	2999	15	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	430	17	intron_retention	FALSE	non_canonical	0	0	junction_14	104.166884353514	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATATC	NA	False	NA	NA	False	NA	NA	NA	85717700	85726352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85725958_85726157
ES.33453.71	chr8	+	2469	22	NNC	ENSMUSG00000052566.9	novel	639	3	NA	NA	433	-1	intron_retention	FALSE	canonical	0	0	junction_1	109.038489948501	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717703	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717733_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.72	chr8	+	2685	20	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	453	-1	intron_retention	FALSE	canonical	3	335	junction_9	41.1279336364928	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTTTTTGCCTATCT	NA	False	NA	17	True	AATAAA	-13	NA	85717723	85729977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85717934_85718005_85718079_85719812_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.73	chr8	+	2417	20	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	466	-2	intron_retention	FALSE	canonical	3	8	junction_3	113.204910673318	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85717736	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717934_85718005_85718079_85719812_85719864_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.74	chr8	+	3776	15	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	1786	552	intron_retention	FALSE	non_canonical	0	0	junction_13	136.698704142672	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTCATGTTGAG	NA	False	NA	NA	False	NA	NA	NA	85719056	85726887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725958_85726157_85726484_85726625
ES.33453.75	chr8	+	3857	17	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2167	0	intron_retention	FALSE	canonical	3	335	junction_7	42.5881438900547	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85719437	85729978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85719864_85719952_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85729244_85729315_85729388_85729493
ES.33453.76	chr8	+	3975	6	NIC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	2779	-723	intron_retention	FALSE	canonical	3	358	junction_1	23.4912749760416	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85720049	85725612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85721412_85721504_85721646_85722364_85723695_85723792_85723881_85724007_85724078_85724628
ES.33453.77	chr8	+	1729	13	ISM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	4256	2	-3618	-2	3prime_fragment	FALSE	canonical	3	335	junction_2	45.2200637623021	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85721501	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.79	chr8	+	1003	6	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-342	5	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	172.989710676676	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCCTATCTGTATGT	NA	False	NA	23	True	AATAAA	-19	NA	85724777	85729983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85724921_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.8	chr8	+	2818	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-27	2	intron_retention	FALSE	canonical	3	109	junction_17	74.2081531908725	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTTTTGCCTATCTGTA	NA	False	NA	20	True	AATAAA	-16	NA	85717204	85729980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
ES.33453.81	chr8	+	3672	5	NNC	ENSMUSG00000052566.9	novel	3080	16	NA	NA	724	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	198.919581740964	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCGTTTTTGCCTATC	NA	False	NA	16	True	AATAAA	-12	NA	85725843	85729976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85725958_85726157_85727867_85727949_85729244_85729315_85729388_85729493
ES.33453.82	chr8	+	2271	2	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	2478	2	intron_retention	FALSE	canonical	3	458	junction_1	0	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85727597	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85729388_85729493
ES.33453.9	chr8	+	2573	21	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	-22	2	intron_retention	FALSE	canonical	2	2	junction_16	94.6593365706732	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGCGTTTTTGCCTA	NA	False	NA	14	True	AATAAA	-10	NA	85717209	85729974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85727787_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ES.33454.1	chr8	+	178	1	Intergenic	novelGene_27219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTAATCCCAA	279	False	NA	NA	False	NA	NA	NA	85731098	85731276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85731100_85731300
ES.33454.2	chr8	+	180	2	Intergenic	novelGene_27220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAACACGGAAA	279	False	NA	NA	False	NA	NA	NA	85731098	85732536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85731259_85732516
ES.33455.1	chr8	+	928	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	-24	-2	-24	2	multi-exon	FALSE	canonical	3	920	junction_1	163	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTTGGTTTATCTTCT	NA	False	NA	23	True	AGTAAA	-23	NA	85753427	85756917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85753864_85756167_85756246_85756503
ES.33455.2	chr8	+	1027	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	617	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	False	NA	20	True	AGTAAA	-20	NA	85753441	85756914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85753864_85756051_85756246_85756503
ES.33455.3	chr8	+	4775	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	37	-3910	37	3910	multi-exon	FALSE	canonical	3	920	junction_1	163	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCATGTGGCTGGTCCC	NA	False	NA	NA	False	NA	NA	NA	85753488	85760825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85753864_85756167_85756246_85756503
ES.33455.4	chr8	+	3167	2	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	39	0	intron_retention	FALSE	canonical	3	1246	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753490	85756915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85756246_85756503
ES.33455.5	chr8	+	3413	1	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	50	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	False	NA	20	True	AGTAAA	-20	NA	85753501	85756914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85753500_85756900
ES.33455.7	chr8	+	1083	2	ISM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	68	9	68	-9	intron_retention	FALSE	canonical	3	920	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGAGTTTGTGCTTG	NA	False	NA	12	True	AGTAAA	-12	NA	85753519	85756906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85753864_85756167
ES.33456.1	chr8	-	4339	6	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-15	2079	intron_retention	FALSE	canonical	3	1094	junction_4	68.6090373055912	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTACTTGTGTGTGTG	8268	False	NA	NA	False	NA	NA	NA	85692655	85681159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684494_85684594_85684719_85686404_85686734_85691759_85692073_85692199_85692272_85692488
ES.33456.10	chr8	-	1678	11	NNC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	-3	88	intron_retention	FALSE	canonical	0	0	junction_10	502.65889030236	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACGTTTGCTTTTTTTTT	4551	False	NA	80	True	NA	NA	NA	85696372	85684207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914_85696014_85696350
ES.33456.12	chr8	-	1813	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-300	-2	intron_retention	FALSE	canonical	3	25	junction_9	454.462509828375	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCGAGTGCTTTGT	4227	False	NA	-10	True	AATAAA	-12	NA	85696696	85684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85696350
ES.33456.13	chr8	-	1840	10	Fusion	ENSMUSG00000052926.17_ENSMUSG00000052837.8	novel	2981	10	NA	NA	-9407	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	558.976268848511	451	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCGAGTGCTTTGT	NA	False	NA	-10	True	AATAAA	-12	NA	85714754	85684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_85684494_85684594_85684719_85686404_85686493_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85700979_85701286_85714549
ES.33456.14	chr8	-	1179	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	-40	2	-40	-2	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCGAGTGCTTTGT	8190	False	NA	-10	True	AATAAA	-12	NA	85692733	85684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ES.33456.15	chr8	-	4554	7	ISM	ENSMUSG00000052926.17	ENSMUST00000147812.8	1532	11	76	3	76	-3	intron_retention	FALSE	canonical	3	1021	junction_5	59.7171574079752	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGACCGAGTGCTTTG	4930	False	NA	-11	True	AATAAA	-11	NA	85695993	85684298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199
ES.33456.16	chr8	-	2141	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	9	junction_9	457.889387688801	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGACCGAGTGCTTT	4521	False	NA	-12	True	AATAAA	-10	NA	85696402	85684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726
ES.33456.17	chr8	-	1499	9	NNC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-448	-4	intron_retention	FALSE	canonical	0	0	junction_8	383.827028099898	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGACCGAGTGCTTT	6970	False	NA	-12	True	AATAAA	-10	NA	85693953	85684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85693713
ES.33456.2	chr8	-	4227	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	49	-3135	-4	2078	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTACTTGTGTGTGT	8279	False	NA	NA	False	NA	NA	NA	85692644	85681160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ES.33456.20	chr8	-	1203	6	FSM	ENSMUSG00000052926.17	ENSMUST00000122931.2	829	6	-72	-302	8	-5	multi-exon	FALSE	canonical	3	1072	junction_2	78.4795514768019	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	8261	False	NA	-13	True	AATAAA	-9	NA	85692662	85684300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85692073_85692199_85692272_85692488
ES.33456.21	chr8	-	1680	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	69	-5	intron_retention	FALSE	canonical	3	24	junction_1	514.369829002105	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	4782	False	NA	-13	True	AATAAA	-9	NA	85696141	85684300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684483_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ES.33456.23	chr8	-	1161	7	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	-28	-5	intron_retention	FALSE	canonical	3	1072	junction_3	73.0716923454098	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	8202	False	NA	-13	True	AATAAA	-9	NA	85692721	85684300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85692073_85692199_85692272_85692488
ES.33456.24	chr8	-	1573	11	NNC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1	junction_8	521.47967362113	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	4528	False	NA	-13	True	AATAAA	-9	NA	85696395	85684300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85693418_85693483_85694291_85694498_85696350
ES.33456.26	chr8	-	1805	11	NNC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_10	510.744838446753	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	4528	False	NA	-13	True	AATAAA	-9	NA	85696395	85684300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726_85696023_85696350
ES.33456.27	chr8	-	177	2	Antisense	novelGene_ENSMUSG00000052566.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	85723426	85691375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85691400_85723273
ES.33456.28	chr8	-	2430	2	NNC	ENSMUSG00000111184.2	novel	339	2	NA	NA	-143	576	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTGGCAAGCAGAAGCA	4718	False	NA	NA	False	NA	NA	NA	85696205	85693730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85695012_85695056
ES.33456.29	chr8	-	2894	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	-1087	2	-1087	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTGTGGTCTCTTTTT	NA	False	NA	-3	True	AGTAAA	-19	NA	85706434	85703540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85703500_85706400
ES.33456.3	chr8	-	4861	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	195	-2075	36	2075	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTATTTACTTGTGTG	4749	False	NA	NA	False	NA	NA	NA	85696174	85681163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ES.33456.30	chr8	-	1143	2	Genic_Genomic	ENSMUSG00000052837.8	novel	1809	1	NA	NA	-52226	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTTCTGTGGTCTCTT	2737	False	NA	-6	True	AGTAAA	-16	NA	85757573	85703543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_85704644_85757530
ES.33456.31	chr8	-	2883	1	Intergenic	novelGene_27218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAAGGTGTGTTCT	NA	False	NA	NA	False	AAAAAG	-5	NA	85712856	85709973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85710000_85712900
ES.33456.32	chr8	-	2133	1	Antisense	novelGene_ENSMUSG00000052566.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAACCCAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717552	85715419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85715400_85717600
ES.33456.33	chr8	-	1151	4	ISM	ENSMUSG00000052819.7	ENSMUST00000209322.2	1944	9	3764	30	3764	-30	3prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	85736456	85733860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85734614_85735829_85735985_85736129_85736211_85736294
ES.33456.34	chr8	-	177	1	Intergenic	novelGene_27221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATATAAGGGCTA	NA	False	NA	NA	False	NA	NA	NA	85736952	85736775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85736800_85737000
ES.33456.35	chr8	-	1266	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	-8	-2	-8	2	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8392	False	NA	-2	True	AATAAA	-16	NA	85751918	85744557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ES.33456.36	chr8	-	1210	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-177	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	758.364413282515	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8636	False	NA	-2	True	AATAAA	-16	NA	85751674	85744557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751545
ES.33456.38	chr8	-	6243	5	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-7	2	intron_retention	TRUE	non_canonical	0	0	junction_4	810.763837378062	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8408	False	NA	-2	True	AATAAA	-16	NA	85751902	85744557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745548_85746150_85746302_85746388_85749640_85749785
ES.33456.39	chr8	-	931	5	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	847.681249055327	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCAGTGGATGGG	8403	False	NA	-2	True	AATAAA	-16	NA	85751907	85744557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745524_85750806_85750955_85751733
ES.33456.4	chr8	-	4226	9	ISM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	180	-8	21	8	intron_retention	FALSE	canonical	3	92	junction_8	354.075821682306	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCTATTTATTTATTT	4734	False	NA	1	True	NA	NA	NA	85696189	85683230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291
ES.33456.40	chr8	-	961	5	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	2	44	junction_3	828.737895839209	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8394	False	NA	-5	True	AATAAA	-13	NA	85751916	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85744885_85745150_85745349_85745439_85745548_85750806_85750955_85751733
ES.33456.42	chr8	-	2122	5	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	3	-1	intron_retention	FALSE	canonical	1	664	junction_2	532.486619550201	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8403	False	NA	-5	True	AATAAA	-13	NA	85751907	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85744885_85745150_85745548_85746150_85746302_85746388_85746538_85750806
ES.33456.45	chr8	-	1091	8	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	746.360010521814	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8403	False	NA	-5	True	AATAAA	-13	NA	85751907	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744615_85744775_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ES.33456.5	chr8	-	2203	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	2	-1064	2	7	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATCTATTTATTTATT	8232	False	NA	0	True	NA	NA	NA	85692691	85683231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ES.33456.50	chr8	-	1245	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	722.96626631	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8406	False	NA	-5	True	AATAAA	-13	NA	85751904	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745540_85746146_85746302_85746388_85746538_85750806_85750955_85751733
ES.33456.51	chr8	-	1150	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_6	747.571122591913	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8446	False	NA	-5	True	AATAAA	-13	NA	85751864	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750896_85751733
ES.33456.52	chr8	-	1394	7	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	47	junction_5	768.619704405241	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8403	False	NA	-5	True	AATAAA	-13	NA	85751907	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746680_85750806_85750955_85751733
ES.33456.53	chr8	-	1317	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8403	False	NA	-5	True	AATAAA	-13	NA	85751907	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
ES.33456.54	chr8	-	837	4	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	934.133823389347	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTGTCAGTGGAT	8410	False	NA	-5	True	AATAAA	-13	NA	85751900	85744560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85744885_85745150_85745349_85750806_85750955_85751733
ES.33456.55	chr8	-	5382	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	782.558340033224	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTTGTCAGTGG	8394	False	NA	-7	True	AATAAA	-11	NA	85751916	85744562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85749640_85749785_85750955_85751733
ES.33456.56	chr8	-	1239	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	-7	-3	at_least_one_novel_splicesite	TRUE	canonical	1	82	junction_6	733.905628962077	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTTGTCAGTGG	8408	False	NA	-7	True	AATAAA	-11	NA	85751902	85744562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750949_85751733
ES.33456.57	chr8	-	1851	6	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	5	-3	intron_retention	FALSE	canonical	3	1873	junction_2	83.1514281296479	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTTGTCAGTGG	8405	False	NA	-7	True	AATAAA	-11	NA	85751905	85744562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85744885_85745150_85745349_85745439_85746302_85746388_85746538_85750806_85750955_85751733
ES.33456.58	chr8	-	6603	2	NNC	ENSMUSG00000052456.10	novel	400	3	NA	NA	3	280	intron_retention	FALSE	non_canonical	0	0	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCAGGTATGCCCACCT	8403	False	NA	NA	False	NA	NA	NA	85751907	85745158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85749640_85749785
ES.33456.6	chr8	-	2710	10	NNC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	113	2	intron_retention	FALSE	canonical	2	3	junction_7	510.655521588081	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATGTTATCTATTTAT	4967	False	NA	-5	True	NA	NA	NA	85695956	85683236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692224_85692488_85692917_85694291_85694498_85695726
ES.33456.8	chr8	-	2572	10	NIC	ENSMUSG00000052926.17	novel	2981	10	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	502.783363995977	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTATGTTATCTATTT	4737	False	NA	-7	True	NA	NA	NA	85696186	85683238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692714_85692917_85694291_85694498_85695914
ES.33456.9	chr8	-	1744	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	-92	392	-39	-392	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTGTGCAACACAT	8191	False	NA	NA	False	ATTAAA	-10	NA	85692732	85683630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ES.33457.1	chr8	+	4958	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-122	0	combination_of_known_junctions	TRUE	canonical	3	89	junction_1	70.9023193477399	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763421	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.10	chr8	+	4946	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	-80	-3	-80	0	multi-exon	FALSE	canonical	3	89	junction_1	89.272513111384	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763463	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.11	chr8	+	2972	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	-16	1907	-16	3	multi-exon	FALSE	canonical	3	89	junction_1	89.272513111384	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATCTGTCCATCTGTC	NA	False	NA	NA	False	NA	NA	NA	85763527	85782302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.12	chr8	+	5920	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-3	0	intron_retention	FALSE	canonical	3	89	junction_1	73.3554828182879	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763540	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781883_85781968_85782097_85782179
ES.33457.13	chr8	+	4916	24	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	1	intron_retention	FALSE	canonical	3	4	junction_11	104.819044720441	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCATTTCCTG	NA	False	NA	18	True	AGTAAA	-20	NA	85763542	85784213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774089_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.14	chr8	+	5722	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_2	101.761632023401	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763542	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.16	chr8	+	4606	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.0124417479133	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763542	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.17	chr8	+	4761	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	97.4736342556283	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763542	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781835_85781883_85781968_85782097_85782179
ES.33457.18	chr8	+	4929	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-1	0	intron_retention	FALSE	canonical	3	89	junction_1	72.0678634178796	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763542	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.19	chr8	+	2911	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATCTGTCCATCTG	NA	False	NA	NA	False	NA	NA	NA	85763543	85782300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.2	chr8	+	4916	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-121	2	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCATTTCCTGG	NA	False	NA	19	True	AGTAAA	-21	NA	85763422	85784214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.20	chr8	+	4821	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.098535412602	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763543	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780488_85780960_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.21	chr8	+	3400	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	3	387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4050438181836	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTATGCCTATGGCCTC	NA	False	NA	NA	False	NA	NA	NA	85763546	85782686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85764870_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.22	chr8	+	4942	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	-2	intron_retention	FALSE	canonical	3	140	junction_1	64.7764751706759	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763549	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781883_85781968
ES.33457.23	chr8	+	4781	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	96.10540184552	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763549	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780960_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.24	chr8	+	5012	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	intron_retention	FALSE	canonical	3	89	junction_1	74.0182019159884	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763549	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.25	chr8	+	4858	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	intron_retention	FALSE	canonical	3	140	junction_1	63.8951172730918	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763549	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.26	chr8	+	4763	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	96.535075663374	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763549	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781987_85782097_85782179
ES.33457.27	chr8	+	4824	25	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	110.872392866755	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763549	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774092_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.28	chr8	+	4914	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	6	0	intron_retention	FALSE	canonical	3	140	junction_1	63.8951172730918	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763549	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.29	chr8	+	4889	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	8	0	intron_retention	FALSE	canonical	3	102	junction_20	84.3142245935351	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763551	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781883_85781968_85782097_85782179
ES.33457.3	chr8	+	5105	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-115	0	intron_retention	FALSE	canonical	3	89	junction_1	73.9230250758425	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763428	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.30	chr8	+	4906	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	8	-2	intron_retention	FALSE	canonical	3	89	junction_1	72.3039687302148	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763551	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.31	chr8	+	5023	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	8	0	intron_retention	FALSE	canonical	3	89	junction_1	92.0405049174251	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763551	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.33	chr8	+	4925	24	ISM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	19	2	19	-2	intron_retention	FALSE	canonical	3	89	junction_1	90.9764505559851	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763562	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.34	chr8	+	6205	23	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	71	0	intron_retention	FALSE	canonical	3	298	junction_6	38.6425663470259	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763614	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85782097_85782179
ES.33457.35	chr8	+	5034	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	92.5778951298131	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763689	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.36	chr8	+	4986	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	-102	0	-102	0	multi-exon	FALSE	canonical	3	53	junction_1	94.0795227306252	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763694	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.37	chr8	+	4950	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	-94	-1915	-94	2	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCATTTCCTGG	NA	False	NA	19	True	AGTAAA	-21	NA	85763702	85784214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.38	chr8	+	4906	25	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	105.881148975317	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763722	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781987_85782097_85782179
ES.33457.39	chr8	+	4968	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	-69	2	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCATTTCCTGG	NA	False	NA	19	True	AGTAAA	-21	NA	85763727	85784214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.41	chr8	+	2980	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	-42	3	-42	-3	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTGTGCATCTGTCCA	NA	False	NA	NA	False	NA	NA	NA	85763754	85782296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.42	chr8	+	5069	23	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	53	junction_1	80.4587055935225	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763758	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.43	chr8	+	4901	25	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	127.092376727411	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763762	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771493_85771589_85771730_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.44	chr8	+	6396	23	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	8	-1	intron_retention	FALSE	canonical	3	64	junction_1	95.9168566438129	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGGTGTCTCATTTCC	NA	False	NA	16	True	AGTAAA	-18	NA	85763804	85784211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.45	chr8	+	2967	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCATCTGTCCATCT	NA	False	NA	NA	False	NA	NA	NA	85763813	85782299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.46	chr8	+	3318	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	19	-396	19	396	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGGCCTCTGTGTACCT	NA	False	NA	NA	False	NA	NA	NA	85763815	85782695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.47	chr8	+	4998	23	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	19	0	intron_retention	FALSE	canonical	3	53	junction_1	80.1106801517761	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763815	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.48	chr8	+	4677	25	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4050438181836	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763815	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763851_85765089_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.49	chr8	+	3356	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	19	391	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTATGGCCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	85763815	85782690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.5	chr8	+	4937	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-111	3	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTCATTTCCTGGT	NA	False	NA	20	True	AGTAAA	-22	NA	85763432	85784215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.50	chr8	+	4842	23	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	19	-2	intron_retention	FALSE	canonical	0	0	junction_18	111.239829138564	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763815	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.51	chr8	+	3351	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	22	1511	22	402	multi-exon	FALSE	canonical	3	53	junction_1	94.0795227306252	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGTACCTTGCATC	NA	False	NA	NA	False	NA	NA	NA	85763818	85782701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.52	chr8	+	5047	25	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	106.867129339818	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763818	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767611_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.53	chr8	+	4944	24	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	23	0	23	0	intron_retention	FALSE	canonical	3	53	junction_1	95.8764761385637	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763819	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.54	chr8	+	4954	24	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	23	0	intron_retention	FALSE	canonical	3	64	junction_1	76.6425676488164	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763819	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.55	chr8	+	4935	24	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	23	0	intron_retention	FALSE	canonical	3	53	junction_1	95.558531237402	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763819	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781883_85781968_85782097_85782179
ES.33457.56	chr8	+	4659	23	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.0124417479133	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763819	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763923_85767228_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.57	chr8	+	4697	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	24	-203	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	92.5778951298131	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCCCTTGTCCGGGGCT	NA	False	NA	NA	False	AATGAA	-14	NA	85763820	85784006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.59	chr8	+	4938	24	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_20	109.544407961748	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763824	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781587_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.6	chr8	+	5971	23	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-111	0	intron_retention	FALSE	canonical	1	3	junction_8	119.366752019159	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763432	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771648_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.60	chr8	+	5335	24	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	28	-2	intron_retention	FALSE	canonical	3	64	junction_1	76.2005115364201	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763824	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.61	chr8	+	3071	25	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	105.788967078593	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763824	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85783974
ES.33457.62	chr8	+	4819	25	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.917908734999	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763824	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763923_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771937_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.63	chr8	+	4950	24	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	28	0	intron_retention	FALSE	canonical	3	4	junction_11	107.138198476448	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763824	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774089_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781883_85781968_85782097_85782179
ES.33457.64	chr8	+	6871	24	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	28	0	intron_retention	FALSE	canonical	3	64	junction_1	94.266264084366	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763824	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85764963_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.65	chr8	+	4859	25	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	104.218711998161	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763828	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780960_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.66	chr8	+	4893	24	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	32	0	intron_retention	FALSE	canonical	3	53	junction_1	78.7078539663764	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763828	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.67	chr8	+	4774	26	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	105.173958754057	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763829	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179_85784008_85784054
ES.33457.69	chr8	+	5042	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	118.418506612494	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763853	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767611_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.7	chr8	+	6406	24	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	-98	1	intron_retention	FALSE	canonical	0	0	junction_17	103.718774197264	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85763445	85784210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780297_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.70	chr8	+	4813	25	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	63	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	118.247026918227	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAACACTTGGTGTCTC	NA	False	NA	10	True	AGTAAA	-12	NA	85763859	85784205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781725_85781802_85781883_85781968_85782097_85782179
ES.33457.71	chr8	+	4807	25	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	96	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	116.246856289631	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763892	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781987_85782097_85782179
ES.33457.73	chr8	+	4949	24	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	104	-2	intron_retention	FALSE	canonical	3	53	junction_1	78.7063168368264	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85763900	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.75	chr8	+	3835	15	NNC	ENSMUSG00000031691.15	novel	356	2	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.318925421355	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763930	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85764166_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.76	chr8	+	5549	24	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	391	-1913	-55	0	3prime_fragment	FALSE	canonical	3	298	junction_6	39.1204818260036	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85764187	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.77	chr8	+	5499	24	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	469	2	23	1	3prime_fragment	FALSE	canonical	3	102	junction_19	69.6168558343243	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGTGTCTCATTTC	NA	False	NA	15	True	AGTAAA	-17	NA	85764265	85784210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.78	chr8	+	5417	24	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	87.6271530885952	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGGTGTCTCATTTCC	NA	False	NA	16	True	AGTAAA	-18	NA	85764289	85784211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771069_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.79	chr8	+	5398	24	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	86.8521765248733	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85764316	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781987_85782097_85782179
ES.33457.8	chr8	+	5037	24	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-97	0	intron_retention	FALSE	canonical	3	89	junction_1	91.1876272574263	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763446	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.80	chr8	+	5636	20	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	103	0	intron_retention	FALSE	canonical	3	298	junction_6	41.1090705157677	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85764448	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807
ES.33457.81	chr8	+	4943	23	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	520	-2	intron_retention	FALSE	canonical	3	8	junction_18	88.0095787423916	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85764865	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780960_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968
ES.33457.82	chr8	+	4604	22	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	-134	0	intron_retention	FALSE	canonical	0	0	junction_19	91.6476789239869	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85767152	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781835_85781883_85781968_85782097_85782179
ES.33457.83	chr8	+	4386	21	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	3754	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	93.9341657758241	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCATTTCCTGG	NA	False	NA	19	True	AGTAAA	-21	NA	85771040	85784214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781358_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.84	chr8	+	4283	20	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	3945	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	112.517083959839	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85771231	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781835_85781883_85781968_85782097_85782179
ES.33457.85	chr8	+	4053	18	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	4362	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	118.857828480094	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85771648	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778237_85778316_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.86	chr8	+	4234	17	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	4366	0	intron_retention	FALSE	canonical	3	333	junction_12	39.7065407080496	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85771652	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.87	chr8	+	3637	16	NNC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	-2833	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	106.57821332503	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85774003	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179_85783619_85783662
ES.33457.89	chr8	+	3362	12	NNC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	118.362170078894	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85776837	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780960_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.9	chr8	+	3374	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	-95	399	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTCTGTGTACCTTGC	NA	False	NA	NA	False	NA	NA	NA	85763448	85782698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.90	chr8	+	3371	12	ISM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	13041	-1913	1	0	3prime_fragment	FALSE	canonical	3	333	junction_7	40.6030980375628	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85776837	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.91	chr8	+	4379	11	NIC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	1	1	intron_retention	FALSE	canonical	3	333	junction_6	38.8691394296298	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGTCTCATTTCCTG	NA	False	NA	18	True	AGTAAA	-20	NA	85776837	85784213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.92	chr8	+	3457	11	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_7	40.7235803926914	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85776837	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85782097_85782179
ES.33457.93	chr8	+	3400	12	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	13042	0	2	0	3prime_fragment	FALSE	canonical	3	102	junction_7	93.6253303296647	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85776838	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.94	chr8	+	3333	12	NNC	ENSMUSG00000031691.15	novel	2941	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	120.778535118847	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACACTTGGTGTCTCAT	NA	False	NA	12	True	AGTAAA	-14	NA	85776838	85784207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781727_85781835_85781883_85781968_85782097_85782179
ES.33457.95	chr8	+	3081	9	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	1458	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_5	40.3043111837927	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85778294	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85782097_85782179
ES.33457.96	chr8	+	4168	8	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	1778	0	intron_retention	FALSE	canonical	3	333	junction_3	30.7245829914744	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85778614	85784212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ES.33457.97	chr8	+	2845	8	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	1803	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_4	105.422957651548	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85778639	85784209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85782097_85782179
ES.33457.98	chr8	+	3597	1	Genic_Genomic	ENSMUSG00000031691.15	novel	NA	NA	NA	NA	5974	2195	mono-exon	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGTAGAAATAAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	85782810	85786407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_85782800_85786400
ES.33457.99	chr8	+	783	1	ISM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	19399	484	6106	-484	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAATACCATTAGC	NA	False	NA	NA	False	NA	NA	NA	85782942	85783725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85782900_85783700
ES.33458.1	chr8	-	2031	16	Antisense	novelGene_ENSMUSG00000077527.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGCGGCCGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	85778435	85763496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85763604_85764959_85765119_85767090_85767165_85767240_85767392_85771039_85771146_85771228_85771364_85771451_85771535_85771609_85771731_85771822_85771946_85773749_85773809_85773916_85774085_85774211_85774364_85776563_85776788_85776984_85777168_85778172_85778245_85778321
ES.33458.2	chr8	-	1988	16	Antisense	novelGene_ENSMUSG00000077527.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGCGGCCGAAATGAA	NA	False	NA	NA	False	NA	NA	NA	85778435	85763496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85763604_85765003_85765119_85767090_85767165_85767240_85767392_85771039_85771146_85771228_85771364_85771451_85771535_85771609_85771731_85771822_85771946_85773749_85773809_85773916_85774085_85774211_85774364_85776563_85776788_85776984_85777159_85778165_85778252_85778325
ES.33458.3	chr8	-	148	1	Antisense	novelGene_ENSMUSG00000031691.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85763668	85763520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85763500_85763700
ES.33458.4	chr8	-	1999	16	Antisense	novelGene_ENSMUSG00000077527.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85778435	85763520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85763604_85764959_85765118_85767090_85767165_85767240_85767392_85771040_85771146_85771228_85771367_85771457_85771535_85771609_85771731_85771822_85771945_85773749_85773809_85773916_85774085_85774211_85774364_85776563_85776788_85776984_85777159_85778165_85778245_85778321
ES.33458.5	chr8	-	2182	16	Antisense	novelGene_ENSMUSG00000077527.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85778435	85763520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85763604_85765003_85765119_85767090_85767165_85767240_85767608_85771037_85771146_85771228_85771364_85771451_85771535_85771609_85771731_85771822_85771946_85773749_85773809_85773916_85774085_85774211_85774364_85776563_85776788_85776984_85777159_85778165_85778252_85778325
ES.33459.1	chr8	+	1909	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	-5	3	-5	1	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	False	NA	19	True	AATAAA	-19	NA	85786678	85793747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ES.33459.10	chr8	+	3704	4	NNC	ENSMUSG00000008167.15	novel	404	4	NA	NA	-1863	1	intron_retention	TRUE	canonical	0	0	junction_1	40.6147209217982	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	False	NA	19	True	AATAAA	-19	NA	85789360	85793747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85789851_85790365_85792599_85792684_85792992_85793073
ES.33459.2	chr8	+	1973	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	14	6	14	1	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	False	NA	19	True	AATAAA	-19	NA	85786698	85793747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ES.33459.3	chr8	+	2610	8	NNC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	14	0	intron_retention	FALSE	canonical	2	2	junction_4	29.5972971738975	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786698	85793750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85791918_85792599_85792684_85792992_85793073_85793140_85793218
ES.33459.4	chr8	+	4597	6	NIC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	81	junction_5	4.9152822909778	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786737	85793750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85788715_85788800_85788930_85791012_85792599_85792684_85792992_85793073_85793140_85793218
ES.33459.5	chr8	+	1805	10	NNC	ENSMUSG00000008167.15	novel	1907	10	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	25.1813177858526	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	False	NA	19	True	AATAAA	-19	NA	85786749	85793747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792717_85792799_85792901_85792992_85793073_85793140_85793218
ES.33459.7	chr8	+	3065	8	NIC	ENSMUSG00000008167.15	novel	1993	9	NA	NA	29	1	intron_retention	FALSE	canonical	3	68	junction_1	8.55951553082585	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	False	NA	19	True	AATAAA	-19	NA	85786754	85793747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ES.33459.8	chr8	+	1836	9	NNC	ENSMUSG00000008167.15	novel	1993	9	NA	NA	154	1	intron_retention	FALSE	canonical	1	1	junction_2	37.9629753839185	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGCTTTCTGTGACT	NA	False	NA	26	True	AATAAA	-26	NA	85786879	85793754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85787166_85788574_85788754_85791012_85791302_85791918_85792046_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ES.33459.9	chr8	+	3213	4	NNC	ENSMUSG00000008167.15	novel	497	3	NA	NA	1864	0	intron_retention	FALSE	non_canonical	0	0	junction_1	37.7918274528002	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85789059	85793750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85790081_85790328_85791302_85792449_85792992_85793073
ES.3346.10	chr10	-	4210	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.9945943971585	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9198	False	NA	-2	True	ATTAAA	-14	NA	80578108	80542789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543244_80544322_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.12	chr10	-	5202	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	24	-1	intron_retention	FALSE	canonical	1	82	junction_14	56.0203589627158	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTTGTGTCCCCA	9232	False	NA	-3	True	ATTAAA	-13	NA	80578074	80542790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.16	chr10	-	4395	29	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	31	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	79.0268941563567	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTTGTGTCCCCA	9239	False	NA	-3	True	ATTAAA	-13	NA	80578067	80542790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.17	chr10	-	4775	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	76.8117178560667	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTTGTGTCCCCA	9233	False	NA	-3	True	ATTAAA	-13	NA	80578073	80542790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559657_80562883_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.18	chr10	-	4913	30	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-17	-1	intron_retention	FALSE	canonical	0	0	junction_21	78.2165505201267	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTTGTGTCCCCA	9484	False	NA	-3	True	ATTAAA	-13	NA	80577822	80542790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557438_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.19	chr10	-	5360	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-44	-2	intron_retention	FALSE	canonical	1	3	junction_27	91.7985475556848	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9164	False	NA	-4	True	ATTAAA	-12	NA	80578142	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.2	chr10	-	4900	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	-95	0	-95	0	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9113	False	NA	-2	True	ATTAAA	-14	NA	80578193	80542789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.20	chr10	-	4255	28	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-6798	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	108.295447633094	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	4085	False	NA	-4	True	ATTAAA	-12	NA	80563822	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80545922_80546127_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553641_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715
ES.3346.22	chr10	-	6070	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	12	-2	intron_retention	FALSE	canonical	1	82	junction_13	56.3874190098479	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9220	False	NA	-4	True	ATTAAA	-12	NA	80578086	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.25	chr10	-	4399	14	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	2041	-2	intron_retention	FALSE	canonical	1	82	junction_12	76.5377270934998	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	8763	False	NA	-4	True	ATTAAA	-12	NA	80552779	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80545121_80545233_80545323_80545600_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704
ES.3346.27	chr10	-	4683	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_29	78.0421545286396	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9232	False	NA	-4	True	ATTAAA	-12	NA	80578074	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80577729
ES.3346.28	chr10	-	4989	32	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	88.9675314039943	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9226	False	NA	-4	True	ATTAAA	-12	NA	80578080	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80545922_80546127_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.31	chr10	-	4732	31	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	11	junction_27	75.6658149731803	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9209	False	NA	-4	True	ATTAAA	-12	NA	80578097	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.32	chr10	-	4674	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	76.4943062514387	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTGTTGTGTCCCC	9253	False	NA	-4	True	ATTAAA	-12	NA	80578053	80542791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80550993_80551767_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.35	chr10	-	4764	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	104.360108385447	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTGTGTGTTGTGTCCC	9191	False	NA	-5	True	ATTAAA	-11	NA	80578115	80542792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.37	chr10	-	6930	29	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	31	-3	intron_retention	FALSE	canonical	0	0	junction_3	78.4793210121661	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTGTGTGTTGTGTCCC	9239	False	NA	-5	True	ATTAAA	-11	NA	80578067	80542792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545032_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.39	chr10	-	6167	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	70	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	98.5956332140977	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTGTGTGTTGTGTCC	9278	False	NA	-6	True	ATTAAA	-10	NA	80578028	80542793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550945_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.4	chr10	-	4671	32	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_28	90.4683041062825	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9503	False	NA	-2	True	ATTAAA	-14	NA	80577803	80542789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.41	chr10	-	6609	30	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	34	-8	intron_retention	FALSE	canonical	1	8	junction_7	113.429460760294	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9242	False	NA	-10	True	ATTAAA	-6	NA	80578064	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80545922_80546127_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552324_80552454_80553532_80553765_80554842_80555223_80555500_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.42	chr10	-	4804	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	74.0504032549602	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9216	False	NA	-10	True	ATTAAA	-6	NA	80578090	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545136_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.43	chr10	-	5052	29	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	21	-8	intron_retention	FALSE	canonical	0	0	junction_16	78.9161916600291	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9229	False	NA	-10	True	ATTAAA	-6	NA	80578077	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.44	chr10	-	5043	17	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-482	-8	intron_retention	FALSE	canonical	1	82	junction_14	69.803714756093	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	6240	False	NA	-10	True	ATTAAA	-6	NA	80555302	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80553765_80554842
ES.3346.46	chr10	-	2843	18	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	1132	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	99.6717449802342	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	7854	False	NA	-10	True	ATTAAA	-6	NA	80553688	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545657_80546243_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532
ES.3346.47	chr10	-	4609	30	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	38	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	94.0253084051824	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9246	False	NA	-10	True	ATTAAA	-6	NA	80578060	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80553532_80553765_80554842_80555223_80555504_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.48	chr10	-	7326	28	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	27	-8	intron_retention	FALSE	canonical	0	0	junction_9	103.069010136316	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9235	False	NA	-10	True	ATTAAA	-6	NA	80578071	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548425_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550937_80551014_80551704_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.49	chr10	-	6534	29	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	50	-8	intron_retention	FALSE	canonical	0	0	junction_17	106.537067181678	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9258	False	NA	-10	True	ATTAAA	-6	NA	80578048	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80545922_80546127_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80553532_80553765_80554842_80555223_80555500_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.5	chr10	-	4771	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	66.9353336354491	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9233	False	NA	-2	True	ATTAAA	-14	NA	80578073	80542789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550148_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.50	chr10	-	6448	28	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	-41	-8	intron_retention	FALSE	canonical	0	0	junction_17	80.4327800014735	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9167	False	NA	-10	True	ATTAAA	-6	NA	80578139	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.54	chr10	-	5275	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	18	-8	intron_retention	FALSE	canonical	1	3	junction_27	102.809013872001	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9226	False	NA	-10	True	ATTAAA	-6	NA	80578080	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552324_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.55	chr10	-	5547	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	35	-8	intron_retention	FALSE	canonical	3	234	junction_14	38.8963988747303	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9243	False	NA	-10	True	ATTAAA	-6	NA	80578063	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.59	chr10	-	6523	29	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	7	-8	intron_retention	FALSE	canonical	0	0	junction_27	79.5151442384739	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9215	False	NA	-10	True	ATTAAA	-6	NA	80578091	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568680_80568781_80577729
ES.3346.60	chr10	-	7216	29	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	28	-8	intron_retention	FALSE	canonical	0	0	junction_14	88.2574720777285	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9236	False	NA	-10	True	ATTAAA	-6	NA	80578070	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550675_80550800_80550882_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.62	chr10	-	4023	24	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	30	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	74.832465685723	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9238	False	NA	-10	True	ATTAAA	-6	NA	80578068	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.64	chr10	-	7633	26	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	21	-8	intron_retention	TRUE	canonical	1	2	junction_4	98.3627246470938	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9229	False	NA	-10	True	ATTAAA	-6	NA	80578077	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80545121_80545233_80545326_80545600_80545791_80546253_80546302_80546522_80546667_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.65	chr10	-	4759	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	77.1650539788287	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9237	False	NA	-10	True	ATTAAA	-6	NA	80578069	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548607_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.66	chr10	-	6492	29	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	18	-8	intron_retention	FALSE	canonical	0	0	junction_6	79.1671168981111	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9226	False	NA	-10	True	ATTAAA	-6	NA	80578080	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545775_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.67	chr10	-	2638	15	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	3806	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	107.018022514234	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	NA	False	NA	-10	True	ATTAAA	-6	NA	80551014	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544486_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941
ES.3346.69	chr10	-	5978	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	28	-8	intron_retention	FALSE	canonical	1	11	junction_26	76.8484463725143	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9236	False	NA	-10	True	ATTAAA	-6	NA	80578070	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.70	chr10	-	5487	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	23	-8	intron_retention	FALSE	canonical	0	0	junction_2	104.308623271947	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATTTGTGTGTTGT	9231	False	NA	-10	True	ATTAAA	-6	NA	80578075	80542797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544502_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565530_80565692_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.72	chr10	-	4757	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.0519665910972	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACATTTGTGTGTTG	9226	False	NA	-11	True	ATTAAA	-5	NA	80578080	80542798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547966_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.73	chr10	-	6130	29	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	25	-51	intron_retention	FALSE	canonical	1	6	junction_4	75.8995375211099	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCCTGAGGTCCTA	9233	False	NA	NA	False	NA	NA	NA	80578073	80543611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545136_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.74	chr10	-	3950	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	31	824	31	-53	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGACCCTGAGGTCC	9239	False	NA	NA	False	NA	NA	NA	80578067	80543613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.75	chr10	-	3959	31	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	13	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	66.9353336354491	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACTGTGTGACCCTGAG	9221	False	NA	NA	False	NA	NA	NA	80578085	80543617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550148_80550937_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.77	chr10	-	7584	17	NNC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	31	2087	intron_retention	FALSE	non_canonical	0	0	junction_4	107.95657040565	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTGGGCTCGCCTT	9239	False	NA	NA	False	AGTAAA	-12	NA	80578067	80548314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550081_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80555223_80555500_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.3346.8	chr10	-	4981	29	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	30	0	intron_retention	FALSE	canonical	0	0	junction_16	94.4598702721782	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9238	False	NA	-2	True	ATTAAA	-14	NA	80578068	80542789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563754_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ES.33460.1	chr8	+	1375	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	-36	-6	-36	6	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTGTCAGGTCCGT	NA	False	NA	29	True	AATAAA	-35	NA	85798349	85801797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ES.33460.10	chr8	+	689	6	NIC	ENSMUSG00000060038.15	novel	1166	8	NA	NA	276	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	108.87717850863	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGCATCCTTGGTGT	NA	False	NA	20	True	AATAAA	-26	NA	85799205	85801788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85799246_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ES.33460.11	chr8	+	667	4	FSM	ENSMUSG00000059355.14	ENSMUST00000140621.2	630	4	-39	2	-24	-2	multi-exon	FALSE	canonical	3	8	junction_3	280.064675070281	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGCACTGTTGCTTCT	NA	False	NA	27	True	TATAAA	-16	NA	85807577	85808959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808611
ES.33460.12	chr8	+	796	3	FSM	ENSMUSG00000059355.14	ENSMUST00000148592.2	798	3	-6	8	-6	-1	multi-exon	FALSE	canonical	3	590	junction_2	13.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGCACTGTTGCTTCTC	NA	False	NA	28	True	TATAAA	-17	NA	85807595	85808960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85807908_85808405_85808504_85808574
ES.33460.13	chr8	+	668	4	NNC	ENSMUSG00000059355.14	novel	922	4	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	283.832109999321	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTGCACTGTTGCTTC	NA	False	NA	26	True	TATAAA	-15	NA	85807598	85808958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85807693_85807801_85807908_85808405_85808490_85808574
ES.33460.2	chr8	+	1896	9	NNC	ENSMUSG00000060038.15	novel	1333	9	NA	NA	-29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.7880971430638	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGCATCCTTGGTGT	NA	False	NA	20	True	AATAAA	-26	NA	85798356	85801788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85798683_85799080_85799436_85799576_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ES.33460.3	chr8	+	3497	12	Fusion	ENSMUSG00000060038.15_ENSMUSG00000059355.14	novel	1333	9	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_8	205.421558091953	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTCTCTTTTGTTC	NA	False	NA	36	True	TATAAA	-25	NA	85798366	85808968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_85798738_85799080_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562_85801667_85806753_85807693_85807801_85807908_85808405_85808504_85808574
ES.33460.4	chr8	+	1943	8	NNC	ENSMUSG00000060038.15	novel	1333	9	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	85.2733898728564	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCATCCTTGGTGTCA	NA	False	NA	22	True	AATAAA	-28	NA	85798385	85801790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85798683_85799080_85799436_85799576_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ES.33460.5	chr8	+	7778	13	Fusion	ENSMUSG00000060038.15_ENSMUSG00000059355.14	novel	1333	9	NA	NA	1	-6	intron_retention	FALSE	non_canonical	0	0	junction_9	181.161070137415	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGCTTGCACTGTTGC	NA	False	NA	23	True	TATAAA	-12	NA	85798386	85808955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562_85805912_85805951_85807693_85807801_85807908_85808405_85808504_85808574
ES.33460.6	chr8	+	2446	6	NNC	ENSMUSG00000060038.15	novel	1166	8	NA	NA	17	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	109.389213362196	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCAGTCTGCAT	NA	False	NA	11	True	AATAAA	-17	NA	85798402	85801779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85798683_85799080_85799436_85799576_85800229_85800309_85801126_85801362_85801489_85801562
ES.33460.7	chr8	+	1263	7	ISM	ENSMUSG00000060038.15	ENSMUST00000152871.8	1166	8	-18	-5	-18	-1	intron_retention	FALSE	canonical	1	5	junction_2	90.2282599238669	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCATCCTTGGTGTCA	NA	False	NA	22	True	AATAAA	-28	NA	85798406	85801790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85798683_85799080_85799246_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ES.33460.8	chr8	+	1265	8	ISM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	463	3	-81	3	3prime_fragment	FALSE	canonical	3	191	junction_1	37.2788718406859	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGCATCCTTGGTGT	NA	False	NA	20	True	AATAAA	-26	NA	85798848	85801788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ES.33460.9	chr8	+	1844	7	NNC	ENSMUSG00000060038.15	novel	1097	7	NA	NA	-57	0	intron_retention	FALSE	non_canonical	0	0	junction_1	92.0229439988866	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTCAGTCTGCATC	NA	False	NA	12	True	AATAAA	-18	NA	85798872	85801780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85799436_85799576_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362
ES.33461.1	chr8	-	2444	2	FSM	ENSMUSG00000095845.4	ENSMUST00000177563.2	328	2	-2060	-56	-2060	56	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTGTGCTGAATGG	NA	False	NA	NA	False	AATAAA	-19	NA	85796671	85794140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85794344_85794430
ES.33461.2	chr8	-	2102	1	Antisense	novelGene_ENSMUSG00000060038.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATACATATACATATAG	NA	False	NA	NA	False	NA	NA	NA	85798727	85796625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85796600_85798700
ES.33461.3	chr8	-	666	1	Antisense	novelGene_ENSMUSG00000060038.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAATAGTGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	85798757	85798091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_85798100_85798800
ES.33462.1	chr8	-	1198	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	38	2	-5	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGTCTTCATTC	NA	False	NA	-4	True	AATAAA	-33	NA	85807337	85801665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
ES.33462.2	chr8	-	5494	3	NNC	ENSMUSG00000005150.17	novel	2707	5	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_1	65	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGTCTTCATTC	NA	False	NA	-4	True	AATAAA	-33	NA	85807320	85801665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85806855_85806936_85807063_85807141
ES.33462.3	chr8	-	5747	3	NNC	ENSMUSG00000005150.17	novel	708	7	NA	NA	-162	0	intron_retention	TRUE	non_canonical	0	0	junction_1	58.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGTCTTCATTC	NA	False	NA	-4	True	AATAAA	-33	NA	85807537	85801665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85805911_85805954_85806337_85806417
ES.33462.4	chr8	-	1555	7	FSM	ENSMUSG00000005150.17	ENSMUST00000136696.8	1561	7	4	2	4	0	multi-exon	FALSE	canonical	3	115	junction_3	8.39477350630869	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCTTAGTCTTCATTC	NA	False	NA	-4	True	AATAAA	-33	NA	85807328	85801665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85801973_85802451_85802567_85802652_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
ES.33462.5	chr8	-	5667	1	NIC	ENSMUSG00000005150.17	novel	1238	9	NA	NA	-3	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATCTTCTTAGTCTTCA	NA	False	NA	-7	True	AATAAA	-30	NA	85807335	85801668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85801700_85807300
ES.33462.6	chr8	-	1256	8	NIC	ENSMUSG00000005150.17	novel	1238	9	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	89	junction_5	14.2599768153917	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATCTTCTTAGTCTTCA	NA	False	NA	-7	True	AATAAA	-30	NA	85807314	85801668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85801973_85802451_85802567_85802652_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
ES.33462.7	chr8	-	5363	5	NNC	ENSMUSG00000005150.17	novel	1561	7	NA	NA	11	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	52.6847938213675	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATCTTCTTAGTCTTC	NA	False	NA	-8	True	AATAAA	-29	NA	85807321	85801669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85805911_85805952_85806337_85806417_85806855_85806941_85807063_85807141
ES.33462.8	chr8	-	5445	4	NNC	ENSMUSG00000005150.17	novel	1561	7	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	54.9201440477192	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGTCTTTACCAATCT	NA	False	NA	-19	True	AATAAA	-18	NA	85807335	85801680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85805911_85805952_85806337_85806417_85806855_85806941
ES.33462.9	chr8	-	4745	7	NIC	ENSMUSG00000005150.17	novel	1406	8	NA	NA	6	-5	intron_retention	FALSE	canonical	3	116	junction_5	7.8616509433805	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTCAGTCTTTACC	NA	False	NA	-24	True	AATAAA	-13	NA	85807326	85801685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85806337_85806417_85806855_85806941_85807063_85807141
ES.33463.1	chr8	+	3187	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-52	687	-7	-687	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809891	85824224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.10	chr8	+	3056	23	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	56.0551123434314	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809902	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85819453_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.11	chr8	+	3100	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-697	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	70.3578484825978	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809902	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811147_85811269_85811444_85811983_85812098_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.12	chr8	+	4990	20	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-696	intron_retention	FALSE	canonical	3	158	junction_5	30.3402678952523	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809902	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823491_85823580_85823684_85824030
ES.33463.13	chr8	+	3190	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	10	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.5934132721122	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGCACTATCTTTTC	NA	False	NA	22	True	ATTAAA	-24	NA	85809908	85824223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818596_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.14	chr8	+	3658	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	12	-697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.5638905740751	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809910	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85810529_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.15	chr8	+	3005	21	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	13	-697	intron_retention	FALSE	canonical	2	5	junction_5	72.9732142638653	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809911	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.18	chr8	+	4451	23	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	14	-697	intron_retention	FALSE	canonical	3	21	junction_2	52.990818634025	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809912	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811236_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.21	chr8	+	3563	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-14	-699	intron_retention	FALSE	canonical	3	158	junction_7	31.295243891835	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGGTCACCCAGTGC	NA	False	NA	11	True	ATTAAA	-13	NA	85809918	85824212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
ES.33463.22	chr8	+	3004	23	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-14	-696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.8122906036745	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809918	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810041_85811236_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.23	chr8	+	3187	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-14	-693	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	52.1592370663352	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCAGTGCACTATC	NA	False	NA	17	True	ATTAAA	-19	NA	85809918	85824218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811236_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.24	chr8	+	4291	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-15	-454	-4	454	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACTTGGTGTTGTAGC	NA	False	NA	NA	False	NA	NA	NA	85809928	85825365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.25	chr8	+	3347	21	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-697	intron_retention	FALSE	canonical	3	11	junction_1	56.8343865982558	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809939	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.26	chr8	+	4697	20	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-1	-697	intron_retention	FALSE	canonical	3	158	junction_5	32.4135329625386	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809942	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.28	chr8	+	3025	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	-1	-695	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	54.9261901431035	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCACCCAGTGCACTA	NA	False	NA	15	True	ATTAAA	-17	NA	85809942	85824216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.29	chr8	+	3474	23	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	-1	696	-1	-696	intron_retention	FALSE	canonical	3	158	junction_7	30.5902336815889	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809942	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
ES.33463.3	chr8	+	5546	20	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-699	intron_retention	FALSE	canonical	3	158	junction_4	32.9902193178087	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGGTCACCCAGTGC	NA	False	NA	11	True	ATTAAA	-13	NA	85809899	85824212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.30	chr8	+	3107	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.3973158584104	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGCACTATCTTTTC	NA	False	NA	22	True	ATTAAA	-24	NA	85809943	85824223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811236_85811444_85811983_85812178_85813439_85813573_85813860_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.32	chr8	+	3133	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.2363726753826	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCCAGTGCACTATCT	NA	False	NA	18	True	ATTAAA	-20	NA	85809943	85824219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815306_85817549_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.34	chr8	+	5437	21	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-696	intron_retention	FALSE	canonical	3	158	junction_4	32.208539240394	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809943	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.35	chr8	+	1377	4	ISM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	1	12001	1	192	5prime_fragment	FALSE	canonical	3	217	junction_2	6.48074069840786	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAGAAAAATATCTAG	NA	False	NA	NA	False	NA	NA	NA	85809944	85812910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983
ES.33463.37	chr8	+	3073	22	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-693	intron_retention	FALSE	canonical	0	0	junction_13	72.3037809156193	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCAGTGCACTATC	NA	False	NA	17	True	ATTAAA	-19	NA	85809944	85824218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820626_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.38	chr8	+	3106	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	53.7821341935414	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809944	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823352_85823491_85823580_85823684_85824030
ES.33463.39	chr8	+	3229	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.9057789577339	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGTGCACTATCTTT	NA	False	NA	20	True	ATTAAA	-22	NA	85809944	85824221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85810529_85810731_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.4	chr8	+	5741	20	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-697	intron_retention	FALSE	canonical	3	158	junction_6	31.8648461639568	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809900	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
ES.33463.40	chr8	+	4523	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-697	intron_retention	FALSE	canonical	3	158	junction_5	31.4432865983956	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809944	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.41	chr8	+	3211	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-700	intron_retention	FALSE	canonical	3	158	junction_7	28.3745972411071	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTCAGGTCACCCAGTG	NA	False	NA	10	True	ATTAAA	-12	NA	85809944	85824211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823684_85824030
ES.33463.42	chr8	+	3543	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5902471079928	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGGTCACCCAGTGCA	NA	False	NA	12	True	ATTAAA	-14	NA	85809944	85824213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85810529_85811133_85811269_85811444_85811983_85812098_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.43	chr8	+	3043	24	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1	-701	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.5638905740751	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCAGGTCACCCAGT	NA	False	NA	9	True	ATTAAA	-11	NA	85809944	85824210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810041_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.44	chr8	+	3137	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-697	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	55.1524781057917	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809945	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811147_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.45	chr8	+	5282	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-696	intron_retention	FALSE	canonical	3	158	junction_6	31.5269743771692	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809945	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.46	chr8	+	5882	18	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-690	intron_retention	FALSE	canonical	1	1	junction_7	79.1009166653651	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGTGCACTATCTTT	NA	False	NA	20	True	ATTAAA	-22	NA	85809945	85824221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85811444_85811983_85813573_85813800_85813947_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818245_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.47	chr8	+	4721	21	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	2	-696	intron_retention	FALSE	canonical	1	3	junction_2	58.1414439105188	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCACCCAGTGCACT	NA	False	NA	14	True	ATTAAA	-16	NA	85809945	85824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811147_85811269_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.48	chr8	+	4560	21	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	3	-693	intron_retention	FALSE	canonical	3	158	junction_6	31.6727011794068	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCAGTGCACTATC	NA	False	NA	17	True	ATTAAA	-19	NA	85809946	85824218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.50	chr8	+	2982	23	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	40	-697	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	70.822557922909	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809983	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811147_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.51	chr8	+	4133	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	41	-697	intron_retention	FALSE	canonical	3	158	junction_5	32.4626420559341	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809984	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.53	chr8	+	3916	20	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	1082	-697	intron_retention	FALSE	non_canonical	0	0	junction_1	77.7102010437522	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85811998	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85813575_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822050_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.54	chr8	+	2647	20	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	183	-701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	77.7609092203151	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCAGGTCACCCAGT	NA	False	NA	9	True	ATTAAA	-11	NA	85813269	85824210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817830_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821949_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.55	chr8	+	2251	20	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	429	-697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	58.7504228781857	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85813515	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85822975_85823334_85823491_85823580_85823684_85824030
ES.33463.56	chr8	+	5499	13	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	461	-698	intron_retention	FALSE	canonical	3	158	junction_3	34.0207248926625	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGGTCACCCAGTGCA	NA	False	NA	12	True	ATTAAA	-14	NA	85813547	85824213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818575_85818693_85818811_85819460_85820646_85820734_85821868_85821954_85822057_85822167_85823491_85823580
ES.33463.6	chr8	+	3698	22	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	3	-697	intron_retention	FALSE	canonical	0	0	junction_2	57.30148617148	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGGTCACCCAGTGCAC	NA	False	NA	13	True	ATTAAA	-15	NA	85809901	85824214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810118_85811029_85811133_85811301_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.7	chr8	+	3027	23	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	3	-687	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	56.4671337158408	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809901	85824224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_85810058_85811256_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.8	chr8	+	4329	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-693	intron_retention	FALSE	canonical	3	11	junction_1	55.9063032155501	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACCCAGTGCACTATC	NA	False	NA	17	True	ATTAAA	-19	NA	85809902	85824218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811269_85811444_85811983_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ES.33463.9	chr8	+	3392	22	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	4	-701	intron_retention	FALSE	canonical	2	5	junction_6	54.8301438189051	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCAGGTCACCCAGT	NA	False	NA	9	True	ATTAAA	-11	NA	85809902	85824210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580
ES.33464.1	chr8	+	174	1	Intergenic	novelGene_27222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTAAGCTTTTC	4280	False	NA	NA	False	NA	NA	NA	85828592	85828766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85828600_85828800
ES.33465.1	chr8	+	158	1	Intergenic	novelGene_27223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	85834403	85834561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85834400_85834600
ES.33466.1	chr8	+	195	1	Intergenic	novelGene_27224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85839210	85839405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85839200_85839400
ES.33467.1	chr8	-	2734	4	FSM	ENSMUSG00000074194.5	ENSMUST00000098550.4	1587	4	-51	-1096	-51	2	multi-exon	FALSE	canonical	3	4	junction_1	2.16024689946929	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCATGTCCTATTCTG	NA	False	NA	NA	False	NA	NA	NA	85846317	85835179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85837672_85838838_85838900_85840135_85840263_85846263
ES.33467.2	chr8	-	152	1	Intergenic	novelGene_27225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	85841972	85841820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85841800_85842000
ES.33468.1	chr8	-	156	1	Intergenic	novelGene_27226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	85847031	85846875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_85846900_85847000
ES.33469.1	chr8	+	182	1	Intergenic	novelGene_27227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	85875474	85875656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_85875500_85875700
ES.3347.1	chr10	+	178	1	Intergenic	novelGene_2587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	80578948	80579126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80578900_80579100
ES.33470.1	chr8	+	2384	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	-1086	-11	-927	11	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTATTTTGCCTGCAT	NA	False	NA	20	True	AATAAA	-28	NA	86025333	86034711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.10	chr8	+	757	4	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	458.615549477143	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026542	86034700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86029990_86030081_86032845_86032948_86034214
ES.33470.11	chr8	+	5774	3	NIC	ENSMUSG00000031697.13	novel	1041	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	993	junction_2	55	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026542	86034699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86032948_86034214
ES.33470.12	chr8	+	869	5	NIC	ENSMUSG00000031697.13	novel	1466	6	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	431.436264122524	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026542	86034699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.13	chr8	+	2612	5	NIC	ENSMUSG00000031697.13	novel	1041	6	NA	NA	-9	4	intron_retention	FALSE	canonical	2	5	junction_3	443.46216016702	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026542	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86029589_86029990_86030081_86032845_86032948_86034214
ES.33470.14	chr8	+	4477	5	NIC	ENSMUSG00000031697.13	novel	1041	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	972	junction_2	59.4915960451558	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026542	86034699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86029589_86029990_86031951_86032845_86032948_86034214
ES.33470.15	chr8	+	1170	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	384.711760788371	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026542	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86026622_86027737_86027868_86029424_86029589_86029988_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.16	chr8	+	1092	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	387.137106060487	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026542	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86026622_86027737_86027868_86029500_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.17	chr8	+	902	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	-97	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACATCTCAGACATTTT	NA	False	NA	-89	True	ACTAAA	-24	NA	86026542	86034602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.18	chr8	+	3127	5	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-9	4	intron_retention	FALSE	canonical	3	991	junction_2	54.2833998566781	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026542	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.2	chr8	+	3041	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-31	7	intron_retention	FALSE	canonical	3	972	junction_2	56.9160785718763	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAGTATTTTGCCT	NA	False	NA	16	True	AATAAA	-24	NA	86026229	86034707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.20	chr8	+	2721	6	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_1	407.80750360924	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026548	86034700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86026628_86027737_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.21	chr8	+	1257	8	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	466.842804465949	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026550	86034699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86027868_86028251_86028354_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.3	chr8	+	4033	4	NIC	ENSMUSG00000031697.13	novel	1041	6	NA	NA	-28	0	intron_retention	FALSE	canonical	2	5	junction_2	460.877665137097	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGTATGAGTA	NA	False	NA	8	True	AATAAA	-16	NA	86026232	86034699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86029589_86029990_86030081_86032845_86032948_86034214
ES.33470.4	chr8	+	1299	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026247	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.5	chr8	+	1182	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	371.665358742093	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTGTATGAGTATT	NA	False	NA	10	True	AATAAA	-18	NA	86026517	86034701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86026622_86027745_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.6	chr8	+	1043	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	220	203	-14	4	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026537	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.7	chr8	+	4888	4	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-13	4	intron_retention	FALSE	canonical	3	993	junction_3	50.7170801823431	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026538	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86026622_86027737_86031951_86032845_86032948_86034214
ES.33470.8	chr8	+	4248	4	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-11	7	intron_retention	FALSE	canonical	3	991	junction_1	49.9755495773239	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAGTATTTTGCCT	NA	False	NA	16	True	AATAAA	-24	NA	86026540	86034707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86030081_86031837_86031951_86032845_86032948_86034214
ES.33470.9	chr8	+	3842	5	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	-10	4	intron_retention	FALSE	canonical	3	972	junction_1	49.469687688523	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTATGAGTATTTTG	NA	False	NA	13	True	AATAAA	-21	NA	86026541	86034704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ES.33471.1	chr8	-	3526	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	-43	-9	-43	9	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTTTTTTGTACAAT	NA	False	NA	1	True	AATAAA	-24	NA	86026474	85987011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.10	chr8	-	3855	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-27	2	intron_retention	FALSE	canonical	3	1260	junction_2	112.188809107187	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATCTTTGTTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	86026125	85987018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.11	chr8	-	3317	18	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-75	2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_15	464.870745141681	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATCTTTGTTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	86026173	85987018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021002_86021102_86021487_86021587_86026083
ES.33471.12	chr8	-	4791	12	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	13430	-2	-11869	2	intron_retention	FALSE	canonical	3	1260	junction_3	104.922797276997	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATCTTTGTTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	86013001	85987018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621
ES.33471.13	chr8	-	5055	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-27	1	intron_retention	FALSE	canonical	3	1260	junction_3	98.6487371096728	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTATCTTTGTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	86026125	85987019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86016432_86021487_86021587_86026083
ES.33471.14	chr8	-	3199	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	358.057956202624	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTATCTTTGTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	86026146	85987019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014458_86016334_86016432_86021487_86021587_86026083
ES.33471.19	chr8	-	3216	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	363.045107390253	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026161	85987020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016444_86021487_86021587_86026083
ES.33471.20	chr8	-	3145	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	362.776613212249	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026136	85987020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988657_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.21	chr8	-	3451	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	365.364880761342	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026413	85987020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007966_86008465_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.22	chr8	-	2981	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	368.817148311855	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026146	85987020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.24	chr8	-	4249	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	360.891517633762	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026116	85987020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988918_85988999_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.29	chr8	-	4962	16	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	371.468939930828	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGATTATCTTTGTT	NA	False	NA	-10	True	AATAAA	-13	NA	86026146	85987022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85988922_85989003_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.3	chr8	-	1619	6	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-18	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	572.051885758626	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTGTTTTTTGTA	NA	False	NA	-3	True	AATAAA	-20	NA	86026116	85987015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_86021487_86021587_86026083
ES.33471.30	chr8	-	3077	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	377.285650697482	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGATTATCTTTGTT	NA	False	NA	-10	True	AATAAA	-13	NA	86026146	85987022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.32	chr8	-	3189	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	359.370260838317	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGGATTATCTTTGTT	NA	False	NA	-10	True	AATAAA	-13	NA	86026146	85987022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000253_86001442_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.35	chr8	-	2276	10	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-63	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	468.965238649656	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTTGGATTATCTTTG	NA	False	NA	-12	True	AATAAA	-11	NA	86026161	85987024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86021502_86021587_86026083
ES.33471.36	chr8	-	3087	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	366.548853800175	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026146	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86021487_86021587_86026083
ES.33471.37	chr8	-	3334	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	365.412352692133	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026091	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86025878
ES.33471.38	chr8	-	3004	16	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	376.66138049388	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026146	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_85988623_85988768_85989939_85990180_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.39	chr8	-	3342	18	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-48	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	468.094066789275	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026146	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86015751_86015910_86016334_86016432_86021487_86021587_86026083
ES.33471.4	chr8	-	3708	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	363.788265813715	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTGTTTTTTGTA	NA	False	NA	-3	True	AATAAA	-20	NA	86026091	85987015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86025514
ES.33471.40	chr8	-	3131	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	359.370260838317	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026100	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001455_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.41	chr8	-	3164	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	365.526498483694	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026119	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005489_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.42	chr8	-	3168	16	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	366.548853800175	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026129	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014483_86021423_86021587_86026083
ES.33471.43	chr8	-	2119	11	NIC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-34	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	434.872636527064	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	False	NA	-13	True	AATAAA	-10	NA	86026132	85987025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_85987939_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.45	chr8	-	2792	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	294	388	-39	-388	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTTTCTTCGT	NA	False	NA	NA	False	NA	NA	NA	86026137	85987408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.46	chr8	-	2091	14	NNC	ENSMUSG00000031696.10	novel	473	3	NA	NA	16	-720	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	397.518486042551	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATGTTTTAAAAGCAT	NA	False	NA	NA	False	AATAAA	-21	NA	86026415	85996850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85996966_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.47	chr8	-	893	6	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	305	23468	-28	5324	5prime_fragment	FALSE	canonical	3	1316	junction_5	114.368527139244	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACGGATTAGAGATTCA	NA	False	NA	NA	False	NA	NA	NA	86026126	86010488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.5	chr8	-	2469	12	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-49	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	439.515529676081	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATCTTTGTTTTTTGTA	NA	False	NA	-3	True	AATAAA	-20	NA	86026147	85987015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005491_86014371_86014449_86016334_86016432_86021487_86021587_86026083
ES.33471.7	chr8	-	7634	16	ISM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	340	-3	1	3	intron_retention	FALSE	canonical	3	1260	junction_3	107.371752958277	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATCTTTGTTTTTTG	NA	False	NA	-5	True	AATAAA	-18	NA	86026091	85987017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487
ES.33471.8	chr8	-	3445	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	480.310052043209	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATCTTTGTTTTTTG	NA	False	NA	-5	True	AATAAA	-18	NA	86026413	85987017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987935_85988642_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014458_86016334_86016432_86021487_86021587_86026083
ES.33471.9	chr8	-	2841	17	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	-49	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	364.624716103763	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATCTTTGTTTTTT	NA	False	NA	-6	True	AATAAA	-17	NA	86026147	85987018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_85987584_85988619_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ES.33472.1	chr8	+	175	1	Intergenic	novelGene_27228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTTCAAATATAG	NA	False	NA	NA	False	NA	NA	NA	86047864	86048039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86047900_86048000
ES.33473.1	chr8	-	168	1	Intergenic	novelGene_27229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	86050372	86050204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86050200_86050400
ES.33474.1	chr8	+	174	1	Intergenic	novelGene_27230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGGGCC	NA	False	NA	NA	False	NA	NA	NA	86111759	86111933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86111800_86111900
ES.33475.1	chr8	+	263	1	Intergenic	novelGene_27231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTTCGAGACAGGA	NA	False	NA	NA	False	AATAAA	-17	NA	86119295	86119558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86119300_86119600
ES.33476.1	chr8	+	3363	1	Antisense	novelGene_ENSMUSG00000036934.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	86134810	86138173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_86134800_86138200
ES.33477.1	chr8	+	1312	5	Intergenic	novelGene_27232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGTAGCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86148206	86194567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86149267_86157188_86157255_86163025_86163080_86171134_86171198_86194498
ES.33477.2	chr8	+	158	1	Intergenic	novelGene_27233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86149086	86149244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86149100_86149200
ES.33477.3	chr8	+	2160	1	Intergenic	novelGene_27234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86150166	86152326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86150200_86152300
ES.33477.4	chr8	+	160	1	Intergenic	novelGene_27235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	86171566	86171726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86171600_86171700
ES.33477.5	chr8	+	176	1	Intergenic	novelGene_27236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAATC	NA	False	NA	NA	False	NA	NA	NA	86179602	86179778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86179600_86179800
ES.33478.1	chr8	-	3303	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	46	-1762	27	1762	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAGGTTTGTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	86159416	86133625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ES.33478.2	chr8	-	1652	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	-67	2	-67	-2	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTGGCATACCAGTGT	NA	False	NA	92	True	ATTAAA	-19	NA	86159529	86135389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ES.33478.4	chr8	-	3706	3	NIC	ENSMUSG00000036934.10	novel	1587	4	NA	NA	5	-98	intron_retention	FALSE	canonical	3	281	junction_2	9.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATTAAGTAGTGTGGTG	NA	False	NA	-4	True	AATAAA	-19	NA	86159457	86135485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86138925_86153488_86153586_86159287
ES.33478.5	chr8	-	1355	3	NNC	ENSMUSG00000036934.10	novel	419	3	NA	NA	13	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCGAGTAGATTAAGTAG	NA	False	NA	-11	True	AATAAA	-12	NA	86159430	86135492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86136522_86138741_86138925_86159287
ES.33478.6	chr8	-	3596	3	NIC	ENSMUSG00000036934.10	novel	1587	4	NA	NA	-2	-215	intron_retention	FALSE	canonical	3	281	junction_2	9.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACTTGTGAACAGTGA	NA	False	NA	NA	False	TATAAA	-16	NA	86159464	86135602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86138925_86153488_86153586_86159287
ES.33478.7	chr8	-	1353	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	19	215	0	-215	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACTTGTGAACAGTGA	NA	False	NA	NA	False	TATAAA	-16	NA	86159443	86135602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ES.33478.8	chr8	-	267	2	ISM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	42	18064	23	-14580	5prime_fragment	FALSE	canonical	3	281	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACTTGTGACATCG	NA	False	NA	NA	False	ATTAAA	-20	NA	86159420	86153451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86153586_86159287
ES.33479.1	chr8	-	2395	1	Intergenic	novelGene_27237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCCAGACAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	86184302	86181907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86181900_86184300
ES.3348.1	chr10	-	234	1	Intergenic	novelGene_2588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTTCAAGTACAATTA	7776	False	NA	NA	False	NA	NA	NA	80579530	80579296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80579300_80579500
ES.33480.1	chr8	-	2989	1	Intergenic	novelGene_27238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACTGTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	86195238	86192249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86192200_86195200
ES.33481.1	chr8	+	163	1	Intergenic	novelGene_27239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAAATTTA	NA	False	NA	-15	True	NA	NA	NA	86198382	86198545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86198400_86198500
ES.33482.1	chr8	+	949	1	Intergenic	novelGene_27240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGCTGCCTTCTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	86200435	86201384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86200400_86201400
ES.33483.1	chr8	+	167	1	Intergenic	novelGene_27241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATATATTAAAAAAA	1088	False	NA	NA	False	NA	NA	NA	86210120	86210287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86210100_86210300
ES.33484.1	chr8	-	175	1	Intergenic	novelGene_27242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	86213281	86213106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86213100_86213300
ES.33485.1	chr8	+	3312	12	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	-394	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.645643020279	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATGGCTGGTTATGAT	9778	False	NA	30	True	AATAAA	-31	NA	86218810	86253900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86218887_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.10	chr8	+	5316	3	NNC	ENSMUSG00000031700.12	novel	484	2	NA	NA	-25	5193	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAGGAAATAA	NA	False	NA	NA	False	NA	NA	NA	86219179	86225129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86224309_86224727
ES.33485.12	chr8	+	5531	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-22	297	-22	-297	intron_retention	FALSE	canonical	0	0	junction_1	281.464100730448	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAAGTAGGATGGCTG	NA	False	NA	22	True	AATAAA	-23	NA	86219182	86253892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884
ES.33485.17	chr8	+	5729	2	FSM	ENSMUSG00000031700.12	ENSMUST00000143659.2	484	2	-52	-5193	-19	5193	multi-exon	FALSE	canonical	0	0	junction_1	0	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAGGAAATAA	NA	False	NA	NA	False	NA	NA	NA	86219185	86225129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533
ES.33485.18	chr8	+	3432	13	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-18	-293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.85377547752	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGATGGCTGGTTA	NA	False	NA	26	True	AATAAA	-27	NA	86219186	86253896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86239091_86239160_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.2	chr8	+	3475	12	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	-259	-297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.645643020279	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAAGTAGGATGGCTG	9913	False	NA	22	True	AATAAA	-23	NA	86218945	86253892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219193_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.20	chr8	+	2065	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-8	218	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	239.722877196232	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGATTCTCTGAATCGC	NA	False	NA	23	True	NA	NA	NA	86219196	86252527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219399_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.21	chr8	+	3328	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	0	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	361.751501393333	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATTAACTTCAAGTAG	NA	False	NA	14	True	AATAAA	-15	NA	86219204	86253884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232311_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.22	chr8	+	3212	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	2	-269	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	366.682478446953	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGATTTTCTACAGGT	NA	False	NA	50	True	NA	NA	NA	86219206	86253920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86249884_86249998_86252164
ES.33485.23	chr8	+	7429	11	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	379.164990472485	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCAGCTTGGTCAATA	NA	False	NA	12	True	AATAAA	-18	NA	86219206	86254188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235931_86238741_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.24	chr8	+	5978	11	FSM	ENSMUSG00000031700.12	ENSMUST00000132932.8	3229	11	-29	-2720	2	-6	multi-exon	FALSE	canonical	0	0	junction_1	369.875668299498	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACTGAGCAGCTTGGT	NA	False	NA	7	True	AATAAA	-13	NA	86219206	86254183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232497_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884
ES.33485.26	chr8	+	5504	2	NNC	ENSMUSG00000031700.12	novel	484	2	NA	NA	2	5193	intron_retention	FALSE	non_canonical	0	0	junction_1	0	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAGGAAATAA	NA	False	NA	NA	False	NA	NA	NA	86219206	86225129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86224309_86224727
ES.33485.28	chr8	+	3512	12	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	2	-305	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	359.276798835965	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATTAACTTCAAGTAG	NA	False	NA	14	True	AATAAA	-15	NA	86219206	86253884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232497_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.3	chr8	+	3499	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-145	285	-145	-285	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTGGTTATGATAGTT	NA	False	NA	34	True	AATAAA	-35	NA	86219059	86253904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.31	chr8	+	5483	10	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	3	-290	intron_retention	FALSE	canonical	0	0	junction_1	428.951981542382	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGATGGCTGGTTATGA	NA	False	NA	29	True	AATAAA	-30	NA	86219207	86253899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86244605_86244743_86246076_86246252_86247967_86248124_86249834
ES.33485.32	chr8	+	5589	2	FSM	ENSMUSG00000031700.12	ENSMUST00000143659.2	484	2	-29	-5076	4	5076	multi-exon	FALSE	canonical	0	0	junction_1	0	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGGGCGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	86219208	86225012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533
ES.33485.33	chr8	+	7145	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	-291	intron_retention	FALSE	canonical	0	0	junction_1	284.897613187615	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGATGGCTGGTTATG	NA	False	NA	28	True	AATAAA	-29	NA	86219208	86253898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.34	chr8	+	1605	10	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.750063668772	948	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGCTCGGCAGATGT	NA	False	NA	3	True	NA	NA	NA	86219208	86252507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246193_86252184
ES.33485.35	chr8	+	3556	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	367.863575255828	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGCTTGGTCAATAAA	NA	False	NA	14	True	AATAAA	-20	NA	86219208	86254190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.36	chr8	+	1362	6	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	4	14791	4	-8725	5prime_fragment	FALSE	canonical	0	0	junction_1	378.325996992012	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	86219208	86239398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741
ES.33485.37	chr8	+	4668	13	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.85377547752	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCAGCTTGGTCAATA	NA	False	NA	12	True	AATAAA	-18	NA	86219208	86254188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86240454_86241489_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.38	chr8	+	3638	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	202	intron_retention	FALSE	canonical	0	0	junction_1	377.901156323472	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCGGCAGATGTACTT	NA	False	NA	7	True	NA	NA	NA	86219208	86252511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86244605_86244743_86246076_86246252_86247967_86249998_86252164
ES.33485.4	chr8	+	3795	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-111	-45	-111	45	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGGCATACACTTTAA	NA	False	NA	58	True	AATAAA	-25	NA	86219093	86254234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.40	chr8	+	5920	1	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	5	5193	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	868	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAGGAAATAA	NA	False	NA	NA	False	NA	NA	NA	86219209	86225129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219200_86225100
ES.33485.46	chr8	+	5790	1	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-13	5076	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	868	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGGGCGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	86219222	86225012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219200_86225000
ES.33485.47	chr8	+	3696	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	239.722877196232	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGAGCAGCTTGGTCA	NA	False	NA	9	True	AATAAA	-15	NA	86219223	86254185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219399_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.49	chr8	+	3923	14	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	450.330371823822	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGCAGCTTGGTCAAT	NA	False	NA	11	True	AATAAA	-17	NA	86219223	86254187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86237427_86237548_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249052_86249238_86249884_86249998_86252164
ES.33485.5	chr8	+	3618	12	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	-110	-1	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	261.743265797007	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCAGCTTGGTCAATA	NA	False	NA	12	True	AATAAA	-18	NA	86219094	86254188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219189_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.50	chr8	+	4566	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-9	-305	intron_retention	FALSE	canonical	0	0	junction_1	386.283143130355	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATTAACTTCAAGTAG	NA	False	NA	14	True	AATAAA	-15	NA	86219226	86253884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86244605_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.53	chr8	+	3457	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	366.682478446953	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86219227	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86249884_86249998_86252164
ES.33485.56	chr8	+	3498	13	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-7	-302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	401.054954325325	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAACTTCAAGTAGGAT	NA	False	NA	17	True	AATAAA	-18	NA	86219228	86253887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249052_86249238_86249884_86249998_86252164
ES.33485.57	chr8	+	5149	3	NNC	ENSMUSG00000031700.12	novel	484	2	NA	NA	-7	5076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGGGCGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	86219228	86225012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219318_86219533_86224309_86224727
ES.33485.58	chr8	+	5778	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	24	4	-7	-4	intron_retention	FALSE	canonical	0	0	junction_1	281.464100730448	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGAGCAGCTTGGTCA	NA	False	NA	9	True	AATAAA	-15	NA	86219228	86254185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884
ES.33485.59	chr8	+	3971	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	361.455094201156	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86219229	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247607_86248124_86249884_86249998_86252164
ES.33485.6	chr8	+	2069	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-92	1662	-92	218	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGATTCTCTGAATCGC	NA	False	NA	23	True	NA	NA	NA	86219112	86252527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.60	chr8	+	5248	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_1	383.440886683002	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCAGCTTGGTCAATA	NA	False	NA	12	True	AATAAA	-18	NA	86219230	86254188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86244605_86244743_86246076_86248124_86249884_86249998_86252164
ES.33485.61	chr8	+	3668	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	361.455094201156	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATTAACTTCAAGTAG	NA	False	NA	14	True	AATAAA	-15	NA	86219230	86253884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247607_86248124_86249884_86249998_86252164
ES.33485.62	chr8	+	7411	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-3	intron_retention	FALSE	canonical	0	0	junction_1	284.897613187615	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86219230	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.64	chr8	+	3123	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.645643020279	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACTTCAAGTAGGATGG	NA	False	NA	19	True	AATAAA	-20	NA	86219230	86253889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219723_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.65	chr8	+	3472	13	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	405.139756407863	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATTAACTTCAAGTAGG	NA	False	NA	15	True	AATAAA	-16	NA	86219230	86253885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247607_86247771_86247967_86248124_86249884_86249998_86252164
ES.33485.66	chr8	+	3364	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	361.751501393333	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGATGGCTGGTTATG	NA	False	NA	28	True	AATAAA	-29	NA	86219230	86253898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232359_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.68	chr8	+	3262	10	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.750063668772	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86219230	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246193_86252184
ES.33485.69	chr8	+	4649	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-298	intron_retention	FALSE	canonical	0	0	junction_1	284.880606570542	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCAAGTAGGATGGCT	NA	False	NA	21	True	AATAAA	-22	NA	86219230	86253891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.70	chr8	+	6747	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	39	intron_retention	FALSE	canonical	0	0	junction_1	294.764689578352	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTATGATGGCATACA	NA	False	NA	52	True	AATAAA	-19	NA	86219230	86254228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86246252_86247967_86249998_86252164
ES.33485.71	chr8	+	3543	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	408.980793260757	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGAGCAGCTTGGTCA	NA	False	NA	9	True	AATAAA	-15	NA	86219230	86254185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249923_86249998_86252191
ES.33485.72	chr8	+	4716	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.85016948669	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGACTGAGCAGCT	NA	False	NA	3	True	AATAAA	-9	NA	86219231	86254179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86249238_86249884_86249998_86252164
ES.33485.73	chr8	+	3543	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-4	44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	367.841215743967	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGATGGCATACACTTTA	NA	False	NA	57	True	AATAAA	-24	NA	86219231	86254233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86252164
ES.33485.74	chr8	+	7530	10	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	27	10	-4	-10	intron_retention	FALSE	canonical	0	0	junction_1	290.217713083909	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGACTGAGCAGCT	NA	False	NA	3	True	AATAAA	-9	NA	86219231	86254179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967
ES.33485.76	chr8	+	3502	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	364.364452911442	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTGACTGAGCAGCT	NA	False	NA	3	True	AATAAA	-9	NA	86219233	86254179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246174_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.78	chr8	+	4936	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_1	284.880606570542	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGAGCAGCTTGGTCA	NA	False	NA	9	True	AATAAA	-15	NA	86219237	86254185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.80	chr8	+	4100	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	33	-494	0	494	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTTCTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86219237	86254683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.81	chr8	+	5400	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	4	37	intron_retention	FALSE	canonical	0	0	junction_1	279.786364928672	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAGTATGATGGCATA	NA	False	NA	50	True	AATAAA	-17	NA	86219241	86254226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86249998_86252164
ES.33485.82	chr8	+	3395	13	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	9	-301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	405.790962880589	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAACTTCAAGTAGGATG	NA	False	NA	18	True	AATAAA	-19	NA	86219246	86253888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86237448_86237548_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.83	chr8	+	3952	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	47	-360	14	360	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGAGTGGATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	86219251	86254549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.84	chr8	+	2952	10	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	16	-290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.750063668772	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGATGGCTGGTTATGA	NA	False	NA	29	True	AATAAA	-30	NA	86219253	86253899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246193_86252184
ES.33485.85	chr8	+	7196	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	51	-4	intron_retention	FALSE	canonical	0	0	junction_1	384.897613450001	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGAGCAGCTTGGTCA	NA	False	NA	9	True	AATAAA	-15	NA	86219288	86254185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86242867_86244605_86244743_86246076_86246252_86249884_86249998_86252164
ES.33485.87	chr8	+	3526	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	62	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	271.645643020279	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86219299	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219319_86219548_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.88	chr8	+	3463	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	65	-293	intron_retention	FALSE	canonical	3	840	junction_5	49.5847758893796	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTAGGATGGCTGGTTA	NA	False	NA	26	True	AATAAA	-27	NA	86219302	86253896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.89	chr8	+	3331	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	66	-289	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	239.722877196232	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATGGCTGGTTATGAT	NA	False	NA	30	True	AATAAA	-31	NA	86219303	86253900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219399_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.9	chr8	+	4151	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	-25	1680	-25	200	intron_retention	FALSE	canonical	0	0	junction_1	281.464100730448	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTCGGCAGATGTAC	NA	False	NA	5	True	NA	NA	NA	86219179	86252509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884
ES.33485.90	chr8	+	1751	11	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	89	124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	350.4019977112	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGGCCCTGTTTTTGTT	NA	False	NA	12	True	NA	NA	NA	86219326	86252433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219399_86219533_86219799_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.91	chr8	+	4760	10	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	96	-299	intron_retention	FALSE	canonical	3	840	junction_5	45.4410485012053	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTCAAGTAGGATGGC	NA	False	NA	20	True	AATAAA	-21	NA	86219333	86253890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.92	chr8	+	3289	12	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	116	-298	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_1	261.460519592892	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCAAGTAGGATGGCT	NA	False	NA	21	True	AATAAA	-22	NA	86219353	86253891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219416_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.93	chr8	+	2011	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	161	1682	128	198	3prime_fragment	FALSE	canonical	3	840	junction_5	49.5847758893796	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGCTCGGCAGATGT	NA	False	NA	3	True	NA	NA	NA	86219365	86252507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.94	chr8	+	3714	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	177	-37	144	37	3prime_fragment	FALSE	canonical	3	840	junction_5	49.5847758893796	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAGTATGATGGCATA	NA	False	NA	50	True	AATAAA	-17	NA	86219381	86254226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.95	chr8	+	3274	9	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	236	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	304.949355426438	985	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAGTATGATGGCATA	NA	False	NA	50	True	AATAAA	-17	NA	86219473	86254226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246193_86252184
ES.33485.96	chr8	+	4021	11	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	326	-493	293	493	3prime_fragment	FALSE	canonical	3	840	junction_5	49.5847758893796	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCTTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86219530	86254682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.97	chr8	+	3132	12	NNC	ENSMUSG00000031700.12	novel	729	4	NA	NA	8686	-380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	415.164450141335	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTTACATGTTTTTT	NA	False	NA	-61	True	TATAAA	-17	NA	86227923	86253809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86228077_86229893_86229984_86232207_86232317_86235807_86235939_86237448_86237548_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ES.33485.98	chr8	+	3069	8	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	-6759	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	319.82220826259	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGAGCAGCTTGGTCAA	NA	False	NA	10	True	AATAAA	-16	NA	86235846	86254186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249834_86249998_86252164
ES.33485.99	chr8	+	3166	2	ISM	ENSMUSG00000031700.12	ENSMUST00000143846.2	628	4	3312	-2373	3312	493	3prime_fragment	FALSE	canonical	3	979	junction_1	0	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCTTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86249349	86254682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86249998_86252164
ES.33486.1	chr8	-	4393	1	Antisense	novelGene_ENSMUSG00000031700.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86232870	86228477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_86228500_86232900
ES.33487.1	chr8	+	4954	1	Intergenic	novelGene_27243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86258593	86263547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86258600_86263500
ES.33488.1	chr8	+	3349	1	Antisense	novelGene_ENSMUSG00000031701.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	86271313	86274662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_86271300_86274700
ES.33488.2	chr8	+	8104	1	Antisense	novelGene_ENSMUSG00000031701.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGGAAAAATCAACTAT	NA	False	NA	NA	False	NA	NA	NA	86271315	86279419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_86271300_86279400
ES.33489.1	chr8	-	2986	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-57	-10	-57	10	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCAGTTCTTCTGCTA	NA	False	NA	NA	False	AATAAA	-25	NA	86282030	86264251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ES.33489.10	chr8	-	3610	7	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	14	994	14	-994	intron_retention	FALSE	canonical	3	694	junction_1	59.8843793395981	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTCACATTTTTAG	NA	False	NA	-2	True	AATAAA	-19	NA	86281959	86265255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815
ES.33489.14	chr8	-	2240	9	NNC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	250	-999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	267.003160093659	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTCTGTGTCACATT	NA	False	NA	-7	True	AATAAA	-14	NA	86281723	86265260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281228
ES.33489.16	chr8	-	1730	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	20	1169	20	-1169	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATCATTTAGATGCATG	NA	False	NA	-4	True	AATAAA	-16	NA	86281953	86265430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ES.33489.17	chr8	-	5943	3	NIC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	-15	2011	intron_retention	FALSE	canonical	3	809	junction_2	30.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCGTACAGGTATGGACT	NA	False	NA	NA	False	NA	NA	NA	86281988	86271315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86275592_86279815_86280040_86280545
ES.33489.5	chr8	-	3216	9	NNC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	266	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	267.003160093659	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTTCCTCAGCATT	NA	False	NA	NA	False	AATAAA	-8	NA	86281707	86264268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281228
ES.33489.7	chr8	-	2314	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-25	630	-25	-630	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTCTCATTAAGTTGA	NA	False	NA	0	True	ATTAAA	-15	NA	86281998	86264891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ES.33489.8	chr8	-	3490	8	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-10	632	-10	-632	intron_retention	FALSE	canonical	3	694	junction_1	55.8894681765825	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCTGTCTCATTAAGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	86281983	86264893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545
ES.33489.9	chr8	-	1984	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	-59	994	-59	-994	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTCACATTTTTAG	NA	False	NA	-2	True	AATAAA	-19	NA	86282032	86265255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ES.3349.1	chr10	+	175	1	Intergenic	novelGene_2589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAGGACAG	NA	False	NA	NA	False	NA	NA	NA	80581482	80581657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80581500_80581700
ES.33490.1	chr8	-	3627	3	Antisense	novelGene_ENSMUSG00000110341.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTGATTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	86333865	86326741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_86330197_86333140_86333237_86333789
ES.33491.1	chr8	-	5793	2	Intergenic	novelGene_27244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCTCTTGTGATTCCT	NA	False	NA	NA	False	NA	NA	NA	86349668	86343712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86347196_86347358
ES.33492.1	chr8	-	5781	9	FSM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	-204	-641	-34	-8	multi-exon	FALSE	canonical	1	1	junction_4	5.7649262788001	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTAAAGCAACTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	86427587	86363224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.10	chr8	-	1034	6	ISM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	-138	25759	32	-22460	5prime_fragment	FALSE	canonical	1	1	junction_1	6.08604962188118	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATTATATGTATGTG	NA	False	NA	NA	False	AATAAA	-18	NA	86427521	86389624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.2	chr8	-	5670	9	FSM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-22	-2716	-22	-128	multi-exon	FALSE	canonical	2	4	junction_3	4.55521678957215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCCTCAATTCTGAAGC	NA	False	NA	1	True	AATAAA	-22	NA	86427575	86363344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.3	chr8	-	5593	9	FSM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	-138	-519	32	-130	multi-exon	FALSE	canonical	1	1	junction_4	5.7649262788001	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGCCTCAATTCTGAA	NA	False	NA	-1	True	AATAAA	-20	NA	86427521	86363346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.4	chr8	-	5259	9	FSM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	-176	-147	-6	-1	multi-exon	FALSE	canonical	1	1	junction_4	5.7649262788001	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGAGTTTTGAGAATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	86427559	86363718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.5	chr8	-	5421	10	NNC	ENSMUSG00000036902.12	novel	2932	9	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	6.56214358232596	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTGAGAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	86427518	86363719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86417463_86417647_86427269
ES.33492.6	chr8	-	3858	9	FSM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-32	-894	-32	894	multi-exon	FALSE	canonical	2	4	junction_3	4.55521678957215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAATAGTTGTCATA	NA	False	NA	NA	False	AATAAA	-28	NA	86427585	86365166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.7	chr8	-	2227	9	FSM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-27	732	-27	372	multi-exon	FALSE	canonical	2	4	junction_3	4.55521678957215	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCCTTTTGTCCTTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	86427580	86366792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.8	chr8	-	2532	8	ISM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-11	1707	-11	-603	5prime_fragment	FALSE	canonical	2	4	junction_2	4.83186700722507	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACATTTCTTTCTTAC	NA	False	NA	NA	False	NA	NA	NA	86427564	86367767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86369156_86374344_86374574_86389807_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33492.9	chr8	-	1148	6	ISM	ENSMUSG00000036902.12	ENSMUST00000216286.2	2932	9	-52	23555	-52	-22451	5prime_fragment	FALSE	canonical	3	14	junction_3	2.0976176963403	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTATGTGTGTATACAT	NA	False	NA	NA	False	AATAAA	-27	NA	86427605	86389615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86389936_86390015_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ES.33493.1	chr8	-	179	1	Intergenic	novelGene_27245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	86433541	86433362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_86433400_86433500
ES.33494.1	chr8	+	2069	1	Genic_Genomic	ENSMUSG00000036879.16	novel	NA	NA	NA	NA	-139	-36837	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACAAACTAAAATTAT	NA	False	NA	NA	False	AATAAA	-23	NA	86567448	86569517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_86567400_86569500
ES.33494.10	chr8	+	8244	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-19	-2874	-8	2874	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCTGAGTCTGGGTC	NA	False	NA	4	True	NA	NA	NA	86567611	86790879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.11	chr8	+	4699	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	30.84080533056	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567611	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.12	chr8	+	3724	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	-894	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCGCTTCTTTAGACT	NA	False	NA	NA	False	NA	NA	NA	86567611	86786376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.13	chr8	+	4051	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-19	1319	-8	-584	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGAGCATCTGTTAAA	NA	False	NA	NA	False	AATATA	-13	NA	86567611	86786686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.15	chr8	+	4630	33	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	34.2823182376863	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567612	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569649_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.16	chr8	+	4688	33	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	30.1345290945453	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567613	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569632_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.17	chr8	+	1638	15	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-5	34026	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	33.1438577435164	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGTTTTTCTTGCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	86567614	86697701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531
ES.33494.18	chr8	+	6379	29	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-3	2	intron_retention	TRUE	canonical	1	2	junction_20	32.5768322585239	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567616	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748171_86748335_86749366_86749449_86750909_86750968_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.19	chr8	+	6732	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_3	35.6362783682233	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567616	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86569742_86575302_86575361_86575597_86575742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.2	chr8	+	4644	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86567589	86787274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.20	chr8	+	4676	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	33.2342390982177	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567616	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569649_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.21	chr8	+	5102	16	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	40482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.7202150530974	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTAAATAGTCTTCT	NA	False	NA	NA	False	AATAAA	-28	NA	86567617	86704157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86700661
ES.33494.22	chr8	+	4568	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.5815764788433	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567617	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.23	chr8	+	4522	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567617	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.24	chr8	+	4374	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-13	990	-2	-255	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAATTTTTTGATTAG	NA	False	NA	NA	False	AGTAAA	-16	NA	86567617	86787015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.25	chr8	+	3176	30	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	7758	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	40.7565493376465	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCACGTGGCTGGCA	NA	False	NA	NA	False	NA	NA	NA	86567617	86764778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86764031_86764149_86764559
ES.33494.26	chr8	+	3581	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-2	-939	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAACTGCATGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	86567617	86786331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.28	chr8	+	4501	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	31.5128897789813	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567618	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.29	chr8	+	3732	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-12	1631	-1	-896	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTCGCTTCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	86567618	86786374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.3	chr8	+	4774	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4421706578124	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86567598	86787274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567815_86569654_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.30	chr8	+	3655	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	-1017	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	33.2342390982177	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGAACCCGTTTCCATG	NA	False	NA	NA	False	NA	NA	NA	86567619	86786253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569649_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.31	chr8	+	6433	30	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	-3	intron_retention	FALSE	canonical	3	8	junction_24	25.1013166961634	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567619	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.32	chr8	+	8137	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	2884	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGTCTTCCTTCAGT	NA	False	NA	14	True	NA	NA	NA	86567619	86790889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.33	chr8	+	4514	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	31.810480453251	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567621	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.34	chr8	+	6632	30	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	4	0	intron_retention	FALSE	canonical	3	10	junction_1	24.5974487042583	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567623	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.35	chr8	+	4539	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	27.0548619577989	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567626	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.37	chr8	+	4571	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	24.7210030475169	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567630	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.38	chr8	+	4499	31	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.6549973472789	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567632	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86602268_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.39	chr8	+	4647	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	26.6511748271444	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567632	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785900
ES.33494.4	chr8	+	6550	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	13	4	intron_retention	FALSE	canonical	3	89	junction_12	15.3917726940943	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86567600	86787274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.40	chr8	+	4600	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	42.2457012202673	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567632	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738297_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.41	chr8	+	3937	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	-673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5377825408459	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAGATGGTTTTTACCT	NA	False	NA	NA	False	NA	NA	NA	86567636	86786597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569748_86602268_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.42	chr8	+	4592	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	31.2468604042017	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGAAGCAATGTCTGCT	NA	False	NA	4	True	NA	NA	NA	86567637	86787266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567687_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668787_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.43	chr8	+	4651	33	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	32.5882815403022	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567637	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569649_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.44	chr8	+	4001	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-585	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	23.8918391755081	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTGAGCATCTGTTAA	NA	False	NA	NA	False	AATATA	-12	NA	86567638	86786685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.45	chr8	+	3841	30	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	-591	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	35.4511940298922	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATTTTCTGAGCATC	NA	False	NA	NA	False	AATATA	-6	NA	86567644	86786679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748171_86748335_86749366_86749449_86750909_86750968_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.46	chr8	+	4655	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.0507921216989	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567644	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86575302_86575361_86575597_86575742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86748169_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.47	chr8	+	4751	34	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	39.0446049460135	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAATGTCTGCTTT	NA	False	NA	6	True	NA	NA	NA	86567644	86787268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.48	chr8	+	4636	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.0656952657231	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567645	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623114_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.49	chr8	+	4682	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.477862051519	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567645	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86596780_86596862_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.5	chr8	+	4647	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	-30	734	13	1	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCTGCTTTCCA	NA	False	NA	9	True	NA	NA	NA	86567600	86787271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.50	chr8	+	6646	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	45.9621851192641	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAATGTCTGCTTT	NA	False	NA	6	True	NA	NA	NA	86567645	86787268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86569742_86575302_86575361_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.52	chr8	+	1849	10	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	4767	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	33.5165336019607	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTCTAATTGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	86567646	86668442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469
ES.33494.53	chr8	+	3423	25	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	42.4811845605401	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567646	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569654_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748252_86786112
ES.33494.54	chr8	+	7266	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-2	intron_retention	FALSE	canonical	1	2	junction_7	42.4846914952481	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAATGTCTGCTTT	NA	False	NA	6	True	NA	NA	NA	86567646	86787268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569632_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.55	chr8	+	3647	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-899	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	31.0490531977145	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTTCGCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	86567646	86786371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623133_86628503_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.56	chr8	+	3904	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	2	-587	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTGAGCATCTGTT	NA	False	NA	NA	False	AATATA	-10	NA	86567646	86786683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.57	chr8	+	4547	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	29.2913883563383	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567647	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785205_86785315_86785933
ES.33494.58	chr8	+	4421	30	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	26.9076016205509	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567647	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.59	chr8	+	4857	34	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.1076807171714	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567647	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567687_86569632_86569742_86575302_86575361_86575597_86575738_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86650350_86650418_86667469_86667566_86668820_86669125_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.6	chr8	+	4209	28	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.8947431520008	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567606	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567738_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.60	chr8	+	4613	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	34.9829757703658	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGCAATGTCTGCTTT	NA	False	NA	6	True	NA	NA	NA	86567647	86787268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567687_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.61	chr8	+	4407	30	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	8	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	27.094892042448	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGTCTGCTTTCCAA	NA	False	NA	10	True	NA	NA	NA	86567652	86787272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.62	chr8	+	4645	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.5705966522493	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86567653	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86575302_86575361_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86623297_86623387_86628505_86628587_86648755_86648872_86662036_86662101_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783189_86785173_86785315_86785933
ES.33494.63	chr8	+	4721	34	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	39.3569056694643	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567654	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86650350_86650418_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.65	chr8	+	5075	1	NIC	ENSMUSG00000036879.16	novel	451	5	NA	NA	2694	-28906	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGTAAATTGCCATGGT	NA	False	NA	NA	False	AATAAA	-14	NA	86572373	86577448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86572400_86577400
ES.33494.66	chr8	+	3542	1	NIC	ENSMUSG00000036879.16	novel	451	5	NA	NA	4437	-28696	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGGCTTGGCAAATGA	NA	False	NA	NA	False	NA	NA	NA	86574116	86577658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86574100_86577700
ES.33494.67	chr8	+	3495	1	Intergenic	novelGene_27246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	3366	False	NA	NA	False	NA	NA	NA	86618766	86622261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86618800_86622300
ES.33494.68	chr8	+	3873	26	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	53449	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	26.4801812682617	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	7728	False	NA	5	True	NA	NA	NA	86623128	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86783076_86783185_86785173_86785315_86785933
ES.33494.69	chr8	+	4420	24	ISM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	93757	735	-82673	0	3prime_fragment	FALSE	canonical	3	89	junction_5	15.0351824323833	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	9593	False	NA	8	True	NA	NA	NA	86661387	86787270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.7	chr8	+	8226	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	2878	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	23.8918391755081	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTCTGGGTCTTCC	NA	False	NA	8	True	NA	NA	NA	86567611	86790883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.70	chr8	+	11990	23	ISM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	95166	-2875	-81264	2875	3prime_fragment	FALSE	canonical	3	89	junction_4	14.6874461490133	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTGAGTCTGGGTCT	NA	False	NA	5	True	NA	NA	NA	86662796	86790880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.71	chr8	+	7028	21	ISM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	105048	-2878	-71382	2878	3prime_fragment	FALSE	canonical	3	89	junction_2	14.224626532883	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTCTGGGTCTTCC	NA	False	NA	8	True	NA	NA	NA	86672678	86790883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.72	chr8	+	174	1	Intergenic	novelGene_27247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTCTGTGTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	86681555	86681729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86681600_86681700
ES.33494.73	chr8	+	564	1	Intergenic	novelGene_27248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACATTCTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	86689340	86689904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_86689300_86689900
ES.33494.74	chr8	+	1945	15	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-5806	-904	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	32.231702608786	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATTCTGAGTCTTCGCT	NA	False	NA	NA	False	NA	NA	NA	86738254	86786366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.75	chr8	+	1849	5	ISM	ENSMUSG00000036879.16	ENSMUST00000162305.2	1950	6	8063	3	8063	-3	3prime_fragment	FALSE	canonical	3	112	junction_1	9.49670995661129	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAGCAATGTCTGCTT	NA	False	NA	5	True	NA	NA	NA	86770337	86787267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33494.8	chr8	+	4483	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	29.145580175217	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTCTGCTTTCCAATT	NA	False	NA	12	True	NA	NA	NA	86567611	86787274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933_86786737_86786875
ES.33494.9	chr8	+	3983	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	-8	-589	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.5815764788433	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTTCTGAGCATCTG	NA	False	NA	NA	False	AATATA	-8	NA	86567611	86786681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ES.33495.1	chr8	-	3305	19	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	14	3684	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.7477007202318	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACTGTGAAAGCTGTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	86567536	86440522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86440531_86444201_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.11	chr8	-	3083	19	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.7477007202318	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	-21	True	AATAAA	-13	NA	86567403	86444206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86445370_86445445_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.13	chr8	-	3234	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-33	105	-33	-105	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTGTTATTTTCCT	NA	False	NA	-126	True	TATAAA	-17	NA	86567583	86444311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.14	chr8	-	2398	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-27	935	-27	-935	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATCTTGTTTTTATC	NA	False	NA	0	True	AATAAA	-41	NA	86567577	86445141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.16	chr8	-	1606	14	NIC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	4447	-962	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	98.5848986839298	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGCCAGGGCGTTGT	NA	False	NA	-27	True	AATAAA	-14	NA	86563103	86445168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974
ES.33495.17	chr8	-	4181	17	NIC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	160	-967	intron_retention	FALSE	canonical	1	110	junction_3	54.9593244477222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACCTGTGGCCAGGGC	NA	False	NA	-32	True	AATAAA	-9	NA	86567390	86445173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.18	chr8	-	2212	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-34	1128	-34	-1128	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTAAGCACTTTGT	NA	False	NA	-13	True	AATAAA	-23	NA	86567584	86445334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.2	chr8	-	3357	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-20	-31	-20	31	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTGGAGCTTTAGAGG	NA	False	NA	10	True	AATAAA	-44	NA	86567570	86444175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.21	chr8	-	4672	1	FSM	ENSMUSG00000031703.9	ENSMUST00000210133.2	2741	1	-1905	-26	-914	26	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGTTCATGGACATAC	NA	False	NA	NA	False	NA	NA	NA	86470061	86465389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_86465400_86470100
ES.33495.22	chr8	-	2673	11	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	166	21209	166	0	5prime_fragment	FALSE	canonical	3	275	junction_4	17.3908021666627	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86567384	86465415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.23	chr8	-	4329	7	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	162	-66760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.96863015898	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAAGAGACCTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	86567388	86532175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86535832_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.24	chr8	-	3020	6	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	-24	90806	-24	-69597	5prime_fragment	FALSE	canonical	3	305	junction_1	16.3780340700586	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTATTGTGTAGCCAGG	NA	False	NA	NA	False	AATAAA	-12	NA	86567574	86535012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.25	chr8	-	2768	8	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	156	-78274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	156.111681634838	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	86567394	86543689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86545684_86557811_86557887_86560908_86561037_86561477_86561536_86561645_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.26	chr8	-	3790	5	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	14	-92482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.282555337523	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTCAGCTTCAATGG	NA	False	NA	NA	False	AATAAA	-23	NA	86567536	86557897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86561037_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.3	chr8	-	3626	19	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	-40	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.308615166206	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGATAATTACTTTGGA	NA	False	NA	0	True	AATAAA	-34	NA	86567590	86444185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86558200_86558460_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.4	chr8	-	3135	18	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	162	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	88.2651322098021	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGCAAGCAACTGGA	NA	False	NA	-13	True	AATAAA	-21	NA	86567388	86444198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565573_86565630_86567162
ES.33495.6	chr8	-	5184	17	NIC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	132	8	intron_retention	FALSE	canonical	1	110	junction_3	54.9593244477222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGCAAGCAACTGGA	NA	False	NA	-13	True	AATAAA	-21	NA	86567418	86444198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33495.9	chr8	-	2989	17	NIC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	166	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	91.3323044916201	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	-21	True	AATAAA	-13	NA	86567384	86444206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ES.33496.1	chr8	-	3120	3	Antisense	novelGene_ENSMUSG00000036879.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCAGGATGACTGG	4414	False	NA	NA	False	NA	NA	NA	86760254	86756034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_86756313_86757373_86757808_86757846
ES.33496.2	chr8	-	4182	2	Antisense	novelGene_ENSMUSG00000036879.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTCAGGATGACTGG	4413	False	NA	NA	False	NA	NA	NA	86760255	86756034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_86757808_86757846
ES.33497.1	chr8	+	157	1	Intergenic	novelGene_27249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATATATGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	87271745	87271902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87271700_87271900
ES.33498.1	chr8	-	4317	26	ISM	ENSMUSG00000036872.17	ENSMUST00000080115.10	4511	29	6078	-262	6078	0	3prime_fragment	FALSE	canonical	0	0	junction_3	0.708801805866774	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCTGAAATGTTGCCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	87287141	87231207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_87231934_87232042_87232208_87233451_87233566_87234526_87234606_87235709_87235870_87236316_87236507_87238902_87238993_87243935_87244123_87251318_87251457_87253891_87254119_87254844_87255043_87257145_87257250_87258152_87258243_87261151_87261221_87261316_87261393_87261502_87261638_87264951_87265156_87266654_87266728_87267968_87268094_87270460_87270533_87275158_87275438_87277156_87277265_87279900_87280050_87284225_87284374_87284779_87284954_87286904
ES.33499.1	chr8	+	157	1	Intergenic	novelGene_27250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87310143	87310300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87310100_87310300
ES.335.1	chr1	-	5634	1	Antisense	novelGene_ENSMUSG00000026083.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38072658	38067024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_38067000_38072700
ES.3350.1	chr10	-	158	1	Intergenic	novelGene_2590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATTAAAAAA	763	False	NA	NA	False	NA	NA	NA	80589547	80589389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80589400_80589500
ES.33500.1	chr8	+	2982	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	-118	-5	-118	4	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTCTCCAGTGGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	87350553	87443264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33500.10	chr8	+	2392	12	NNC	ENSMUSG00000047866.21	novel	2371	13	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.8381268729872	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGTCTCCAGTGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	87350712	87443262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360582_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33500.11	chr8	+	3756	5	ISM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	-17	71985	-17	-71985	5prime_fragment	FALSE	non_canonical	0	0	junction_3	98.9883200180708	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAATAGATGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	87350716	87371274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169
ES.33500.12	chr8	+	2866	16	NNC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	86.8476571679142	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTGGTCTCCAGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	87350730	87443260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442369_87442435_87442877
ES.33500.14	chr8	+	2542	14	ISM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	60	2413	-2	-2413	5prime_fragment	FALSE	canonical	3	174	junction_5	35.1160375708102	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTAACTTATATTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	87350731	87440846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530
ES.33500.15	chr8	+	1832	10	NNC	ENSMUSG00000047866.21	novel	2371	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.724045457544	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTGGTCTCCAGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	87350731	87443260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360557_87364597_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87442877
ES.33500.17	chr8	+	2278	14	NNC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	7480	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.6847140250421	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATTCTGGTCTCCAGT	NA	False	NA	NA	False	AATAAA	-11	NA	87358213	87443258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87358249_87360496_87360629_87361431_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33500.18	chr8	+	1844	11	NIC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	10761	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	74.1890153594183	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGTCTCCAGTGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	87361494	87443262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87440530_87440722_87442877
ES.33500.19	chr8	+	5331	3	Antisense	novelGene_ENSMUSG00000082484.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTTATGTGA	NA	False	NA	NA	False	NA	NA	NA	87384952	87390969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_87387015_87387214_87390032_87390517
ES.33500.2	chr8	+	1474	6	NIC	ENSMUSG00000047866.21	novel	4486	13	NA	NA	9	-74634	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	90.2786796536148	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGCAGTTCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	87350680	87368625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87368169
ES.33500.20	chr8	+	4000	1	Intergenic	novelGene_27252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCCTCATTCATTCAC	NA	False	NA	NA	False	NA	NA	NA	87409241	87413241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87409200_87413200
ES.33500.21	chr8	+	5482	2	Intergenic	novelGene_27253	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACTAAGATGTTCTGTC	NA	False	NA	NA	False	NA	NA	NA	87419144	87424706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87419893_87419972
ES.33500.22	chr8	+	1986	1	NIC	ENSMUSG00000047866.21	novel	1550	9	NA	NA	63078	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTGGTCTCCAGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	87441274	87443260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_87441300_87443300
ES.33500.3	chr8	+	2971	8	NNC	ENSMUSG00000047866.21	novel	4486	13	NA	NA	25	-73057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.7941855792189	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTGGATGTTTTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	87350696	87370202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368528_87368686
ES.33500.5	chr8	+	4647	8	NNC	ENSMUSG00000047866.21	novel	4486	13	NA	NA	27	-71378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.7941855792189	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGTCAAGTT	NA	False	NA	NA	False	NA	NA	NA	87350698	87371881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368529_87368688
ES.33500.6	chr8	+	4203	7	ISM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	27	71982	27	-71982	5prime_fragment	FALSE	canonical	3	174	junction_5	25.8827484372635	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATAGATGTGTCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	87350698	87371277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169
ES.33500.7	chr8	+	2735	15	NNC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	68.4147018452279	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTGGTCTCCAGTGG	NA	False	NA	NA	False	AATAAA	-13	NA	87350702	87443260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358107_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33500.8	chr8	+	7632	13	NIC	ENSMUSG00000047866.21	novel	2859	15	NA	NA	-29	1	intron_retention	FALSE	canonical	3	180	junction_3	28.6962057112473	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTGGTCTCCAGTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	87350704	87443261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33500.9	chr8	+	2402	12	NNC	ENSMUSG00000047866.21	novel	2371	13	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	75.8381268729872	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGAATTCTGGTCTCCA	NA	False	NA	NA	False	AATAAA	-9	NA	87350708	87443256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_87351045_87358013_87358249_87360496_87360594_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ES.33501.1	chr8	+	2971	1	Genic_Genomic	ENSMUSG00000047866.21	novel	NA	NA	NA	NA	71958	2624	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	87450154	87453125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_87450200_87453100
ES.33502.1	chr8	-	177	1	Intergenic	novelGene_27251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATATTA	NA	False	NA	NA	False	NA	NA	NA	87387216	87387039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_87387000_87387200
ES.33503.1	chr8	-	5485	3	NNC	ENSMUSG00000036840.6	novel	1968	2	NA	NA	-95	8481	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGCCCATAATGATTC	NA	False	NA	NA	False	NA	NA	NA	87472657	87442153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87444094_87449152_87452485_87472444
ES.33503.10	chr8	-	292	1	Intergenic	novelGene_27254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTAGCTCTTAAGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	87484114	87483822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_87483800_87484100
ES.33503.2	chr8	-	5720	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-4	-3748	-4	3748	multi-exon	FALSE	canonical	3	375	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCCCAGCTGAATTTTA	-9	True	NA	NA	False	AATAAA	-13	NA	87472566	87446886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87452485_87472444
ES.33503.3	chr8	-	2217	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-175	-74	-175	74	multi-exon	FALSE	canonical	3	375	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	NA	False	NA	NA	False	ATTAAA	-25	NA	87472737	87450560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87452485_87472444
ES.33503.4	chr8	-	1986	3	NNC	ENSMUSG00000036840.6	novel	1968	2	NA	NA	-94	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	187.5	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTAATGTGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	87472656	87450567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87452281_87452423_87452485_87472444
ES.33503.5	chr8	-	6529	1	Genic_Genomic	ENSMUSG00000036840.6	novel	NA	NA	NA	NA	15465	66	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAATGTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	87457097	87450568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_87450600_87457100
ES.33503.6	chr8	-	2193	3	NNC	ENSMUSG00000036840.6	novel	1968	2	NA	NA	-11537	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTAATGTGTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	87484099	87450568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87452485_87479464_87479637_87483994
ES.33503.7	chr8	-	2068	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	-554	454	-554	-454	multi-exon	FALSE	canonical	3	375	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGTTTTTCTCACTT	NA	False	NA	NA	False	AATAAA	-19	NA	87473116	87451088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87452485_87472444
ES.33503.8	chr8	-	2121	2	NNC	ENSMUSG00000036840.6	novel	1968	2	NA	NA	17171	-454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGTTTTTCTCACTT	NA	False	NA	NA	False	AATAAA	-19	NA	87455391	87451088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87452485_87454666
ES.33504.1	chr8	-	138	1	Intergenic	novelGene_27255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAGAATCAT	NA	False	NA	NA	False	NA	NA	NA	87485469	87485331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_87485300_87485500
ES.33505.1	chr8	-	225	1	Intergenic	novelGene_27256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGCTTGCTGTCCATC	NA	False	NA	NA	False	NA	NA	NA	87486641	87486416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_87486400_87486600
ES.33506.1	chr8	+	175	1	Intergenic	novelGene_27257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	87500980	87501155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87501000_87501200
ES.33507.1	chr8	+	5197	1	Antisense	novelGene_ENSMUSG00000031652.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGACCAGCAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	87577766	87582963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_87577800_87583000
ES.33508.1	chr8	+	159	1	Intergenic	novelGene_27259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	87610233	87610392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87610200_87610400
ES.33509.1	chr8	-	6558	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-81	-8	-81	8	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGTGCTTTCTTGACT	NA	False	NA	0	True	NA	NA	NA	87611967	87567758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.10	chr8	-	4201	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.018237482108	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611925	87567766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87568271_87570577_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.11	chr8	-	6441	6	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.273939737406	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611861	87567766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87571881_87572107_87573442_87573551_87575074_87575183_87587053_87588739_87611449
ES.33509.12	chr8	-	6235	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	154.279575770742	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611880	87567766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87587053_87588739_87611449
ES.33509.13	chr8	-	4548	4	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	174.27245590996	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611878	87567766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87611449
ES.33509.14	chr8	-	7930	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-35	-1	intron_retention	FALSE	canonical	0	0	junction_2	158.630663807474	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCTGGAGGGTGGTGCT	NA	False	NA	-9	True	NA	NA	NA	87611921	87567767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87575183_87579786_87579918_87587053_87588739_87611449
ES.33509.15	chr8	-	6362	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	144.156859011287	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGAGGGTGGTGC	NA	False	NA	-10	True	NA	NA	NA	87611889	87567768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.17	chr8	-	7597	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	307	-2	intron_retention	FALSE	canonical	3	315	junction_2	34.3837170765466	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGAGGGTGGTGC	NA	False	NA	-10	True	NA	NA	NA	87611579	87567768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579918_87587053_87588739_87611449
ES.33509.18	chr8	-	6127	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-2861	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	135.874533628966	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGAGGGTGGTGC	NA	False	NA	-10	True	NA	NA	NA	87614747	87567768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87614650
ES.33509.19	chr8	-	3821	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-33	2681	-33	499	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCCCCTGCATTTCCC	NA	False	NA	NA	False	AATAAA	-26	NA	87611919	87570447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.2	chr8	-	6524	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	158.205497982329	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGGTGGTGCTTTCT	NA	False	NA	-5	True	NA	NA	NA	87611894	87567763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87602355_87602400_87611449
ES.33509.20	chr8	-	3421	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	-125	3173	-125	7	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCTTCCTTAAGGAAA	NA	False	NA	NA	False	AATAAA	-30	NA	87612011	87570939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.21	chr8	-	5066	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	2	6	intron_retention	FALSE	canonical	3	315	junction_1	23.6084730552401	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611884	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.22	chr8	-	7815	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-13	6	intron_retention	FALSE	canonical	3	315	junction_2	34.6987031457949	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611899	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87579918_87587053_87588739_87611449
ES.33509.23	chr8	-	2891	3	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-40	6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	166.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611926	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87587053_87588739_87611449
ES.33509.24	chr8	-	4162	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-8	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	132.85664789121	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611894	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579209_87579786_87579918_87587053_87588739_87611449
ES.33509.25	chr8	-	3375	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-36	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	158.205497982329	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611922	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87602355_87602400_87611449
ES.33509.26	chr8	-	4794	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	25	6	intron_retention	FALSE	canonical	3	334	junction_3	30.4197304393053	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611861	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.27	chr8	-	4724	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	8	6	intron_retention	FALSE	canonical	3	315	junction_2	34.3837170765466	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611878	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579918_87587053_87588739_87611449
ES.33509.29	chr8	-	3207	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	143.008251510184	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTGCTTCCTTAAGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611895	87570940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87579786_87579918_87587053_87588739_87611449
ES.33509.3	chr8	-	6041	3	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	166.5	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGGTGGTGCTTTCT	NA	False	NA	-5	True	NA	NA	NA	87611899	87567763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87587053_87588739_87611449
ES.33509.30	chr8	-	2453	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	-17	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	124.979345232298	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611895	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87587175_87588002_87588739_87611449
ES.33509.31	chr8	-	3162	9	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	294	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	171.008588965584	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611592	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87602355_87602400_87608635_87608776_87611449
ES.33509.32	chr8	-	3153	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-23	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.236824031619	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611909	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588597_87611449
ES.33509.33	chr8	-	3006	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-2935	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	135.874533628966	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87614821	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87614650
ES.33509.34	chr8	-	3367	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-50	-17	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	157.182981890275	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611936	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579163_87579209_87579786_87579918_87587053_87588739_87611449
ES.33509.35	chr8	-	3530	9	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-3	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	174.101802115889	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611889	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87608097_87608213_87608635_87608776_87611449
ES.33509.36	chr8	-	3054	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	2	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	145.50429546924	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611884	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.37	chr8	-	3077	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-33	-17	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	154.279575770742	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	87611919	87570963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87587053_87588739_87611449
ES.33509.38	chr8	-	9290	4	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	12	-18	intron_retention	FALSE	canonical	3	335	junction_2	33.0386978489703	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAATTAAGAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	87611874	87570964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87579918_87587053_87588739_87611449
ES.33509.39	chr8	-	3198	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-39	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	140.748570152595	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAAAAAAAAATTAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	87611925	87570968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ES.33509.4	chr8	-	4824	1	Genic_Genomic	ENSMUSG00000031652.12	novel	NA	NA	NA	NA	-1915	2	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGAGGGTGGTGCTTTC	NA	False	NA	-6	True	NA	NA	NA	87572588	87567764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_87567800_87572600
ES.33509.40	chr8	-	4851	6	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-170	-29	intron_retention	FALSE	canonical	0	0	junction_4	148.343655071594	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATTTTAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	87612056	87570975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579918_87587069_87588739_87611449
ES.33509.41	chr8	-	2989	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	251	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	136.480767875917	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATTTTAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	87611635	87570975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578330_87579786_87579918_87587053_87588739_87611449
ES.33509.42	chr8	-	3669	2	Intergenic	novelGene_27258	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGTTCAGTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	87596761	87592911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_87596005_87596185
ES.33509.43	chr8	-	4912	1	Genic_Genomic	ENSMUSG00000031652.12	novel	NA	NA	NA	NA	-49	-36077	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACAAGAGATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	87611935	87607023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_87607000_87611900
ES.33509.5	chr8	-	6525	8	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	157.182981890275	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGAGGGTGGTGCTTTC	NA	False	NA	-6	True	NA	NA	NA	87611895	87567764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579163_87579209_87579786_87579918_87587053_87588739_87611449
ES.33509.6	chr8	-	7338	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	132.85664789121	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	-7	True	NA	NA	NA	87611895	87567765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579209_87579786_87579918_87587053_87588739_87611449
ES.33509.7	chr8	-	4217	9	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.114621285179	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	-7	True	NA	NA	NA	87611895	87567765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87568271_87570577_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579163_87579209_87579786_87579918_87587053_87588739_87611449
ES.33509.8	chr8	-	6361	6	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	143.008251510184	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	-7	True	NA	NA	NA	87611874	87567765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87579786_87579918_87587053_87588739_87611449
ES.33509.9	chr8	-	6139	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	-375	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	136.236824031619	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	False	NA	-7	True	NA	NA	NA	87612261	87567765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87612155
ES.3351.1	chr10	+	5879	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-84	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGACTCCGTCCCGGT	1571	False	NA	5	True	TATAAA	-29	NA	80590955	80629651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.10	chr10	+	5804	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	2	1002	0	68	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACTGGCCAGGGACCCT	1657	False	NA	NA	False	NA	NA	NA	80591041	80630293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.11	chr10	+	6484	28	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	23.0603074085706	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1658	False	NA	15	True	AATAAA	-19	NA	80591042	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80627976_80628608_80629340
ES.3351.12	chr10	+	4734	28	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	1	-108	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	23.0603074085706	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTACTTTATTCCATCA	1658	False	NA	53	True	GATAAA	-39	NA	80591042	80629544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80627976_80628608_80629340
ES.3351.13	chr10	+	8749	27	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	4	0	2	0	intron_retention	FALSE	canonical	3	61	junction_7	16.4622573531021	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1659	False	NA	16	True	AATAAA	-20	NA	80591043	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.14	chr10	+	6457	29	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	27.9699866474981	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1659	False	NA	16	True	AATAAA	-20	NA	80591043	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614173_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80626826_80628380_80628608_80629340
ES.3351.15	chr10	+	4670	27	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	22.6449636497439	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGACTCCGTCCCGGT	1664	False	NA	5	True	TATAAA	-29	NA	80591048	80629651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.16	chr10	+	5836	27	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	16	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_26	21.7647793763634	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	1673	False	NA	13	True	AATAAA	-17	NA	80591057	80631292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80629340
ES.3351.17	chr10	+	7393	29	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	24.0348386594908	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1673	False	NA	16	True	AATAAA	-20	NA	80591057	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609575_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.18	chr10	+	5998	28	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	22.1766817314951	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	1674	False	NA	13	True	AATAAA	-17	NA	80591058	80631292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80627232_80627396_80629340
ES.3351.2	chr10	+	5218	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	-53	1643	-53	0	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTCCGTCCCGGTG	1602	False	NA	6	True	TATAAA	-30	NA	80590986	80629652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.20	chr10	+	5363	29	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	17	-117	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	24.4110996416443	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATTCTGACTTACTTT	1674	False	NA	44	True	GATAAA	-30	NA	80591058	80629535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624645_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.21	chr10	+	8956	29	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.1744881483065	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1674	False	NA	15	True	AATAAA	-19	NA	80591058	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80593429_80595529_80595628_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.23	chr10	+	6872	27	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	18	-3	intron_retention	FALSE	canonical	3	61	junction_7	16.2441159123896	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	1675	False	NA	13	True	AATAAA	-17	NA	80591059	80631292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.24	chr10	+	7999	28	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	18	-1	intron_retention	FALSE	canonical	3	43	junction_27	18.0482511340747	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1675	False	NA	15	True	AATAAA	-19	NA	80591059	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80628608_80629340
ES.3351.25	chr10	+	8698	27	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	24	-1	intron_retention	FALSE	canonical	3	5	junction_7	22.2040030507855	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1681	False	NA	15	True	AATAAA	-19	NA	80591065	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609575_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.26	chr10	+	5530	27	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	26.3682389186051	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1684	False	NA	15	True	AATAAA	-19	NA	80591068	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624645_80624927_80625147_80625354_80626153_80626219_80629340
ES.3351.27	chr10	+	6944	27	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	166	1643	-91	0	intron_retention	FALSE	canonical	3	61	junction_7	16.4622573531021	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTCCGTCCCGGTG	1821	False	NA	6	True	TATAAA	-30	NA	80591205	80629652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.28	chr10	+	5459	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-35	-115	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTCTGACTTACTTTAT	1877	False	NA	46	True	GATAAA	-32	NA	80591261	80629537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.29	chr10	+	177	1	Intergenic	novelGene_2591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	76	False	NA	NA	False	NA	NA	NA	80602984	80603161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80603000_80603200
ES.3351.3	chr10	+	7004	27	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-40	-118	intron_retention	FALSE	canonical	3	5	junction_7	22.2040030507855	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAATTCTGACTTACTT	1615	False	NA	43	True	GATAAA	-29	NA	80590999	80629534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609575_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.30	chr10	+	7650	25	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-8932	0	intron_retention	FALSE	canonical	1	4	junction_5	29.0071530929106	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1168	False	NA	16	True	AATAAA	-20	NA	80604457	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80604503_80606971_80607201_80608937_80609033_80609539_80609575_80613389_80613446_80614133_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976
ES.3351.31	chr10	+	9420	21	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-6253	0	intron_retention	FALSE	canonical	3	61	junction_3	16.8742407236592	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	551	False	NA	16	True	AATAAA	-20	NA	80607136	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80607201_80608937_80609033_80609539_80609603_80613389_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.32	chr10	+	6730	20	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-3826	-17	intron_retention	FALSE	canonical	2	3	junction_5	25.5636731523768	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATAGACTTGACTGCAT	220	False	NA	NA	False	TATAAA	-1	NA	80609563	80630164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444
ES.3351.33	chr10	+	6465	21	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	21803	1	-547	-1	3prime_fragment	FALSE	canonical	3	69	junction_1	15.0728232259255	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	3499	False	NA	15	True	AATAAA	-19	NA	80612842	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.34	chr10	+	6631	20	NIC	ENSMUSG00000061589.15	novel	4529	21	NA	NA	656	-1	intron_retention	FALSE	canonical	3	39	junction_18	21.3375457521656	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	4702	False	NA	15	True	AATAAA	-19	NA	80614045	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.35	chr10	+	5844	20	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	707	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9828750211286	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	4753	False	NA	16	True	AATAAA	-20	NA	80614096	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80614177_80616695_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.36	chr10	+	9536	18	NIC	ENSMUSG00000061589.15	novel	4529	21	NA	NA	1201	-1	intron_retention	FALSE	canonical	3	43	junction_17	18.7505939928981	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	5247	False	NA	15	True	AATAAA	-19	NA	80614590	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80628608_80629340
ES.3351.37	chr10	+	6939	15	NIC	ENSMUSG00000061589.15	novel	4529	21	NA	NA	1732	-3	intron_retention	FALSE	canonical	2	6	junction_14	26.2465741204681	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	157	False	NA	13	True	AATAAA	-17	NA	80615121	80631292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80629340
ES.3351.38	chr10	+	6120	19	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	25297	3	2947	-3	3prime_fragment	FALSE	canonical	3	72	junction_6	14.1348225979863	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTTCTCAGTGCCA	923	False	NA	13	True	AATAAA	-17	NA	80616336	80631292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.4	chr10	+	7497	27	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-38	0	intron_retention	FALSE	canonical	3	61	junction_7	16.1234604329021	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1617	False	NA	16	True	AATAAA	-20	NA	80591001	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.40	chr10	+	3729	18	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-3752	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	25.8068417204581	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGACTCCGTCCCGGT	1832	False	NA	5	True	TATAAA	-29	NA	80617245	80629651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624645_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.41	chr10	+	7057	16	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-3021	-1	intron_retention	FALSE	canonical	3	39	junction_15	20.4978047605103	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	2563	False	NA	15	True	AATAAA	-19	NA	80617976	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976
ES.3351.43	chr10	+	5021	12	ISM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	29534	0	-424	0	3prime_fragment	FALSE	canonical	3	75	junction_1	14.1614072233466	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	5160	False	NA	16	True	AATAAA	-20	NA	80620573	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.45	chr10	+	5082	8	ISM	ENSMUSG00000061589.15	ENSMUST00000150338.8	4529	21	8050	690	442	-117	intron_retention	FALSE	canonical	3	80	junction_4	13.2757258919874	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATTCTGACTTACTTT	6026	False	NA	44	True	GATAAA	-30	NA	80621439	80629535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153
ES.3351.46	chr10	+	4038	8	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	778	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.1065993181724	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	6362	False	NA	16	True	AATAAA	-20	NA	80621775	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80622101_80622187_80622313_80623667_80623798_80624645_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.47	chr10	+	3734	8	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	1234	-111	intron_retention	FALSE	canonical	3	39	junction_7	26.4975932676836	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTTACTTTATTCCA	18	False	NA	50	True	GATAAA	-36	NA	80622231	80629541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976
ES.3351.48	chr10	+	4287	9	NNC	ENSMUSG00000061589.15	novel	4529	21	NA	NA	1234	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	39.4493345951487	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	18	False	NA	16	True	AATAAA	-20	NA	80622231	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80626928_80627976_80628608_80629340
ES.3351.5	chr10	+	6849	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	-38	-3	-38	3	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCAGTGCCAGTTTTT	1617	False	NA	19	True	AATAAA	-23	NA	80591001	80631298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.6	chr10	+	7520	27	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	61	junction_7	16.4239326024609	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTCTCAGTGCCAGT	1625	False	NA	15	True	AATAAA	-19	NA	80591009	80631294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.7	chr10	+	7451	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-7	5	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGCCAGTTTTTCT	1648	False	NA	21	True	AATAAA	-25	NA	80591032	80631300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
ES.3351.8	chr10	+	5057	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	-3	1754	-3	-111	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTTACTTTATTCCA	1652	False	NA	50	True	GATAAA	-36	NA	80591036	80629541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.3351.9	chr10	+	6779	28	NNC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	21.7942114865619	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1656	False	NA	16	True	AATAAA	-20	NA	80591040	80631295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609575_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ES.33510.1	chr8	+	180	1	Intergenic	novelGene_27260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	87646104	87646284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87646100_87646300
ES.33511.1	chr8	+	227	1	Intergenic	novelGene_27261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGGAATTAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	87747242	87747469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_87747200_87747500
ES.33512.1	chr8	+	538	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	5	-5	5	5	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGACACTAAAGAGGAG	NA	False	NA	42	True	AATAAA	-31	NA	87774321	87774859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_87774300_87774900
ES.33513.1	chr8	-	1836	3	FSM	ENSMUSG00000031654.17	ENSMUST00000034076.16	2800	3	-53	1017	-53	-184	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTGAAACAGCTTTC	47	False	NA	NA	False	AATAAA	-18	NA	88199290	88196049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_88197080_88198319_88198440_88198604
ES.33513.2	chr8	-	1353	4	NNC	ENSMUSG00000031654.17	novel	1699	4	NA	NA	1	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.77123616632825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGAAACAGCTTT	101	False	NA	NA	False	AATAAA	-17	NA	88199236	88196050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_88197080_88198319_88198440_88198604_88198666_88199093
ES.33514.1	chr8	+	530	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	-31	-1	-31	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	167	False	NA	7	True	AATAAA	-15	NA	88199408	88252182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
ES.33514.2	chr8	+	606	5	NIC	ENSMUSG00000097248.10	novel	498	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	79.1023861839831	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	177	False	NA	5	True	AATAAA	-13	NA	88199418	88252180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88199589_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ES.33514.3	chr8	+	701	4	FSM	ENSMUSG00000097248.10	ENSMUST00000181159.8	682	4	-21	2	-21	0	multi-exon	FALSE	canonical	3	13	junction_3	80.2509951478623	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	177	False	NA	5	True	AATAAA	-13	NA	88199418	88252180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88251859
ES.33514.4	chr8	+	643	6	NIC	ENSMUSG00000097248.10	novel	498	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	87.0631954387157	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGAGTGTGTCCATTCCTC	197	False	NA	5	True	AATAAA	-13	NA	88199438	88252180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88199589_88229589_88229647_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ES.33514.5	chr8	+	2274	2	FSM	ENSMUSG00000097248.10	ENSMUST00000180700.9	2314	2	34	6	2	-6	multi-exon	FALSE	canonical	3	132	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	16	False	NA	NA	False	NA	NA	NA	88199473	88250522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88199589_88248363
ES.33514.6	chr8	+	446	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182758.2	447	4	1	0	1	0	multi-exon	FALSE	canonical	3	44	junction_1	69.6866000191014	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTCCATTCCTCCT	228	False	NA	7	True	AATAAA	-15	NA	88199762	88252182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88199859_88248363_88248442_88250923_88251056_88252042
ES.33515.1	chr8	-	5448	1	Antisense	novelGene_ENSMUSG00000097248.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAAATTTTGATTTTAG	NA	False	NA	NA	False	NA	NA	NA	88243245	88237797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88237800_88243200
ES.33516.1	chr8	+	181	1	Intergenic	novelGene_27262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAATAAAACTG	2045	False	NA	NA	False	NA	NA	NA	88285268	88285449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88285300_88285400
ES.33517.1	chr8	+	1438	1	Intergenic	novelGene_27265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAAACACCTGTCCCTT	3197	False	NA	NA	False	NA	NA	NA	88665761	88667199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88665800_88667200
ES.33518.1	chr8	-	4882	8	FSM	ENSMUSG00000045333.16	ENSMUST00000109655.9	4907	8	25	0	25	0	multi-exon	FALSE	canonical	2	9	junction_7	4.95695759225642	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGTTCTCTCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	88686198	88388437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88685823
ES.33518.10	chr8	-	174	1	Intergenic	novelGene_27263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAACTTCTGTATGTGG	NA	False	NA	NA	False	ATTAAA	-37	NA	88488612	88488438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88488400_88488600
ES.33518.11	chr8	-	200	1	Intergenic	novelGene_27264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAACCTGTGAGACAAAA	2396	False	NA	NA	False	NA	NA	NA	88633761	88633561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88633600_88633800
ES.33518.2	chr8	-	4634	8	NNC	ENSMUSG00000045333.16	novel	4907	8	NA	NA	433	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.2692161128619	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCCTGGTTCTCTCC	NA	False	NA	NA	False	AATAAA	-20	NA	88670247	88388439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500277_88506826_88510042_88585911_88586113_88631116_88631177_88670115
ES.33518.3	chr8	-	4584	8	NNC	ENSMUSG00000045333.16	novel	4907	8	NA	NA	1202	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	9.60442075084092	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGCAACACTGCCTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	88621161	88388446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88619587_88619642_88621069
ES.33518.5	chr8	-	4430	7	FSM	ENSMUSG00000045333.16	ENSMUST00000052250.15	4510	7	-16	96	-16	-96	multi-exon	FALSE	canonical	0	0	junction_6	8.19383236885457	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTTTCCGTGCAACTGGA	NA	False	NA	NA	False	ATTAAA	-19	NA	88622379	88388535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88622298
ES.33518.6	chr8	-	4781	8	FSM	ENSMUSG00000045333.16	ENSMUST00000109655.9	4907	8	25	101	25	-99	multi-exon	FALSE	canonical	2	9	junction_7	4.95695759225642	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCGGTTTCCGTGCAACT	NA	False	NA	NA	False	ATTAAA	-16	NA	88686198	88388538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88685823
ES.33518.7	chr8	-	4446	8	NNC	ENSMUSG00000045333.16	novel	4907	8	NA	NA	800	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.60442075084092	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTTGCCAGTTCACCG	NA	False	NA	NA	False	ATTAAA	-15	NA	88621563	88388586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88619587_88619642_88621469
ES.33518.8	chr8	-	5530	8	FSM	ENSMUSG00000045333.16	ENSMUST00000109655.9	4907	8	-1092	469	-1092	-467	multi-exon	FALSE	canonical	2	9	junction_7	4.95695759225642	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTATTGTCCTGCTCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	88687315	88388906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88685823
ES.33518.9	chr8	-	4118	8	NNC	ENSMUSG00000045333.16	novel	4907	8	NA	NA	483	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.59161728890653	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTTATTGTCCTGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	88670197	88388908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88670115
ES.33519.1	chr8	+	1258	3	Intergenic	novelGene_27266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATTGGCAATGAG	468	False	NA	NA	False	NA	NA	NA	88693937	88695584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88694980_88695109_88695165_88695423
ES.3352.1	chr10	+	4835	7	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-138	-2	intron_retention	FALSE	canonical	3	1175	junction_6	110.315330857602	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4214	False	NA	27	True	ATTAAA	-15	NA	80633893	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639723_80639805
ES.3352.12	chr10	+	1844	8	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-94	-2	intron_retention	FALSE	canonical	3	1171	junction_6	126.117211436061	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4792	False	NA	27	True	ATTAAA	-15	NA	80634471	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639558_80639653_80639723_80639805
ES.3352.13	chr10	+	1704	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-93	-2	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_8	578.519649082898	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4793	False	NA	27	True	ATTAAA	-15	NA	80634472	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639817
ES.3352.15	chr10	+	1862	7	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-69	-2	intron_retention	FALSE	canonical	3	103	junction_1	464.088862419927	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4817	False	NA	27	True	ATTAAA	-15	NA	80634496	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634586_80637029_80637362_80638231_80638279_80638625_80638736_80639293_80639558_80639653_80639723_80639805
ES.3352.17	chr10	+	1888	10	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	643.066457790952	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4834	False	NA	27	True	ATTAAA	-15	NA	80634513	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80635151_80635333_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639438_80639558_80639653_80639723_80639805
ES.3352.19	chr10	+	2060	8	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-34	0	intron_retention	FALSE	canonical	3	1171	junction_6	123.369364106329	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4852	False	NA	29	True	ATTAAA	-17	NA	80634531	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.2	chr10	+	2063	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	97	1	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	429.244230450451	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCTGCTGTGTGTTTG	4449	False	NA	30	True	ATTAAA	-18	NA	80634128	80640759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.20	chr10	+	3696	8	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-25	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	489.659481847605	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCCTGTCTGCTGTGT	4861	False	NA	25	True	ATTAAA	-13	NA	80634540	80640754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80635080_80635546_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639558_80639653_80639723_80639805
ES.3352.21	chr10	+	1725	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	463.666619862806	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4862	False	NA	27	True	ATTAAA	-15	NA	80634541	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639349_80639397_80639558_80639653_80639723_80639805
ES.3352.22	chr10	+	1952	6	ISM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	511	2	-23	-2	intron_retention	FALSE	canonical	3	1377	junction_1	59.511343456521	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4863	False	NA	27	True	ATTAAA	-15	NA	80634542	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293
ES.3352.23	chr10	+	1660	10	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-23	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	439.946826192147	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4863	False	NA	27	True	ATTAAA	-15	NA	80634542	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805_80640280_80640319
ES.3352.24	chr10	+	1687	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_8	458.422822703015	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4864	False	NA	27	True	ATTAAA	-15	NA	80634543	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639817
ES.3352.25	chr10	+	1781	10	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	568.710627452818	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4871	False	NA	27	True	ATTAAA	-15	NA	80634550	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80636033_80636123_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.26	chr10	+	3452	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	460.497675754178	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCCTGTCTGCTGTG	4884	False	NA	24	True	ATTAAA	-12	NA	80634563	80640753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80636416_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.28	chr10	+	1589	10	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	439.946826192147	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4894	False	NA	29	True	ATTAAA	-17	NA	80634573	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805_80640259_80640340
ES.3352.29	chr10	+	1784	9	NIC	ENSMUSG00000020211.16	novel	727	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	436.564070326453	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	5078	False	NA	29	True	ATTAAA	-17	NA	80634757	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80634937_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.3	chr10	+	2298	6	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	103	-2	intron_retention	FALSE	canonical	1	3	junction_5	692.923487839747	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	4455	False	NA	27	True	ATTAAA	-15	NA	80634134	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638728_80639293
ES.3352.30	chr10	+	3254	5	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-1641	-2	intron_retention	FALSE	canonical	3	1171	junction_3	94.7760518274527	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTCTGCTGTGTGT	7013	False	NA	27	True	ATTAAA	-15	NA	80636692	80640756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.31	chr10	+	1449	7	ISM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	3251	0	-1051	0	3prime_fragment	FALSE	canonical	3	1171	junction_5	107.444042283517	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	7603	False	NA	29	True	ATTAAA	-17	NA	80637282	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.32	chr10	+	2526	3	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-283	-3	intron_retention	FALSE	canonical	3	1171	junction_1	2	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCCCTGTCTGCTGTGTG	8371	False	NA	26	True	ATTAAA	-14	NA	80638050	80640755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80639558_80639653_80639723_80639805
ES.3352.4	chr10	+	2101	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	118	-6	118	6	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTGTTTGGTAGT	4470	False	NA	35	True	ATTAAA	-23	NA	80634149	80640764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.5	chr10	+	2110	9	FSM	ENSMUSG00000020211.16	ENSMUST00000151928.8	781	9	-412	-917	122	0	multi-exon	FALSE	canonical	3	55	junction_7	448.68263770175	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4474	False	NA	29	True	ATTAAA	-17	NA	80634153	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639634_80639723_80639805
ES.3352.6	chr10	+	1923	10	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	146	-6	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	551.275445928758	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCTCCCTGTCTGCTGT	4498	False	NA	23	True	ATTAAA	-11	NA	80634177	80640752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634255_80634338_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ES.3352.7	chr10	+	1882	8	ISM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	414	0	-120	0	intron_retention	FALSE	canonical	3	1171	junction_7	103.295692068934	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4766	False	NA	29	True	ATTAAA	-17	NA	80634445	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653
ES.3352.9	chr10	+	1757	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_6	459.51006517812	706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4786	False	NA	29	True	ATTAAA	-17	NA	80634465	80640758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639438_80639558_80639653_80639723_80639805
ES.33520.1	chr8	-	181	1	Intergenic	novelGene_27267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATACAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	88732037	88731856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88731900_88732000
ES.33521.1	chr8	-	175	1	Intergenic	novelGene_27268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	88788114	88787939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88787900_88788100
ES.33522.1	chr8	+	178	1	Intergenic	novelGene_27269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTCA	4326	False	NA	NA	False	NA	NA	NA	88810850	88811028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88810800_88811000
ES.33523.1	chr8	+	182	1	FSM	ENSMUSG00000118626.2	ENSMUST00000239289.2	1187	1	899	106	899	-106	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACATC	NA	False	NA	NA	False	NA	NA	NA	88837312	88837494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88837300_88837500
ES.33524.1	chr8	+	1863	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	-42	-90	-42	86	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTAGATATTTTCCTTG	NA	False	NA	99	True	AATAAA	-32	NA	88845354	88861824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ES.33524.2	chr8	+	1415	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	-8	324	-8	302	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTTAAAGTACTAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	88845388	88861410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ES.33524.3	chr8	+	1658	5	FSM	ENSMUSG00000036810.17	ENSMUST00000127490.8	1643	5	-17	2	1	2	multi-exon	FALSE	canonical	3	5	junction_2	72.261244799685	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGGTTAGAGATTTT	NA	False	NA	11	True	AATAAA	-13	NA	88845397	88861736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88845498_88846407_88846480_88856322_88856433_88856974_88857030_88860415
ES.33524.4	chr8	+	1721	6	NNC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.3004710617638	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGTGGTTAGAGATT	NA	False	NA	9	True	AATAAA	-11	NA	88845400	88861734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88845492_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ES.33524.5	chr8	+	1882	7	NNC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	4	2	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_6	84.2194553928406	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGGTTAGAGATTTT	NA	False	NA	11	True	AATAAA	-13	NA	88845400	88861736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88858860_88859014_88860415
ES.33524.6	chr8	+	2260	5	FSM	ENSMUSG00000036810.17	ENSMUST00000128290.2	1616	5	-16	-628	-3	2	multi-exon	FALSE	canonical	3	147	junction_2	25.4656631564937	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTGGTTAGAGATTTT	NA	False	NA	11	True	AATAAA	-13	NA	88845411	88861736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88857030_88860415
ES.33524.7	chr8	+	3699	6	NNC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	-2	0	intron_retention	FALSE	canonical	1	3	junction_5	73.2464333602668	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGTGGTTAGAGATT	NA	False	NA	9	True	AATAAA	-11	NA	88845412	88861734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88859014_88860415
ES.33524.8	chr8	+	2220	4	FSM	ENSMUSG00000036810.17	ENSMUST00000121097.8	2209	4	-13	2	0	-2	multi-exon	FALSE	canonical	3	147	junction_2	27.6526068692749	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTTGTGTGGTTTA	NA	False	NA	15	True	NA	NA	NA	88845414	88858313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322
ES.33525.1	chr8	-	3802	2	Antisense	novelGene_ENSMUSG00000036810.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCAGGACTCCCAACTT	NA	False	NA	NA	False	NA	NA	NA	88858420	88850079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88851782_88856320
ES.33525.2	chr8	-	2617	3	Antisense	novelGene_ENSMUSG00000036810.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTCAGGACTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	88857779	88850081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88851782_88856320_88856433_88856974
ES.33526.1	chr8	+	183	1	Intergenic	novelGene_27270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTTTTAGAAAATATA	NA	False	NA	NA	False	NA	NA	NA	88863678	88863861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88863700_88863900
ES.33527.1	chr8	+	3291	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	-40	0	-40	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88864442	88898655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.10	chr8	+	2925	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	5	321	4	-291	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTAGATAGTGAGATG	NA	False	NA	NA	False	AGTAAA	-16	NA	88864487	88898334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.11	chr8	+	3266	16	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	5	-56	intron_retention	FALSE	canonical	0	0	junction_6	94.7261784771712	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864488	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88872758_88872866_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.12	chr8	+	3054	15	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	7	-56	intron_retention	FALSE	canonical	0	0	junction_4	97.7207861246333	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864490	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871165_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893717_88893801_88897486
ES.33527.14	chr8	+	3101	15	FSM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	13	-28	13	-2	multi-exon	FALSE	canonical	0	0	junction_1	73.8094623655658	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTGTGTCATACAGA	NA	False	NA	NA	False	AATAAA	-14	NA	88864496	88898653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88864652_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.15	chr8	+	3166	15	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	13	-2	intron_retention	FALSE	canonical	1	1	junction_6	72.8936883133126	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTGTGTCATACAGA	NA	False	NA	NA	False	AATAAA	-14	NA	88864496	88898653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876788_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.16	chr8	+	2991	15	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	13	-56	intron_retention	FALSE	canonical	0	0	junction_13	73.7851611098058	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864496	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891594_88893717_88893801_88897486
ES.33527.18	chr8	+	2922	13	NIC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	22	-56	intron_retention	FALSE	canonical	0	0	junction_3	77.4707830231644	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864505	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88864786_88864902_88865076_88866519_88866608_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.19	chr8	+	3321	14	NIC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	43	-3	intron_retention	FALSE	canonical	3	239	junction_7	20.0139004948499	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTTGTGTCATACAG	NA	False	NA	NA	False	AATAAA	-13	NA	88864526	88898652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.20	chr8	+	3039	15	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	119	-56	intron_retention	FALSE	canonical	0	0	junction_1	73.8094623655658	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864602	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864908_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.21	chr8	+	2894	14	NNC	ENSMUSG00000031657.17	novel	1939	4	NA	NA	1606	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.2798491386512	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAATTAGTAGA	NA	False	NA	NA	False	NA	NA	NA	88866089	88898603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88866261_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.22	chr8	+	2724	14	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	2073	33583	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.04610861774	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGTGAGACGGGTGAG	NA	False	NA	NA	False	NA	NA	NA	88866556	88932238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88866608_88868297_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486_88898619_88932217
ES.33527.23	chr8	+	2492	11	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	6672	56	6672	-56	3prime_fragment	FALSE	canonical	3	239	junction_3	20.133554082675	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88871155	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.24	chr8	+	2243	9	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	12233	56	-6976	-56	3prime_fragment	FALSE	canonical	3	239	junction_1	19.6178330862509	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88876716	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.25	chr8	+	4657	4	FSM	ENSMUSG00000031657.17	ENSMUST00000146946.2	1939	4	-2804	86	1649	-56	multi-exon	FALSE	canonical	3	244	junction_3	22.0907220343745	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88885341	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.26	chr8	+	1287	1	NIC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	289	-3952	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCAATAAATAAATAAATAA	NA	False	NA	NA	False	AGTAAA	-37	NA	88888434	88889721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88888400_88889700
ES.33527.27	chr8	+	2837	1	NIC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	4623	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88895732	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88895700_88898600
ES.33527.28	chr8	+	207	1	Intergenic	novelGene_27274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCTTTTAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	88914063	88914270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88914100_88914300
ES.33527.29	chr8	+	160	1	Intergenic	novelGene_27276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88918710	88918870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88918700_88918900
ES.33527.3	chr8	+	3038	14	NIC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	-17	-56	intron_retention	FALSE	canonical	0	0	junction_12	75.6331069301356	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88864465	88898569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88893623_88893801_88897486
ES.33527.30	chr8	+	4625	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-95	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.4717219141608	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCCTGCTCATTTGTT	NA	False	NA	18	True	AGTAAA	-19	NA	88925745	88986354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.32	chr8	+	4688	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	-64	0	-64	0	multi-exon	FALSE	canonical	3	15	junction_1	34.7235110871902	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925776	88986350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.34	chr8	+	3339	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-43	1078	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.4849676057116	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGATTTTTGTATTGCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	88925797	88985117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.35	chr8	+	5288	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-42	5	intron_retention	FALSE	canonical	3	98	junction_5	15.7967461865615	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCCTGCTCATTTGTTC	NA	False	NA	19	True	AGTAAA	-20	NA	88925798	88986355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.36	chr8	+	4490	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	49.1422290671267	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTTGCCTGCTCATTT	NA	False	NA	15	True	AGTAAA	-16	NA	88925810	88986351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88983726
ES.33527.37	chr8	+	6471	12	ISM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	-28	6	-28	0	intron_retention	FALSE	canonical	3	15	junction_1	36.2600798183037	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTTAGTTTGCCTG	NA	False	NA	8	True	AGTAAA	-9	NA	88925812	88986344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736
ES.33527.38	chr8	+	3525	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	-27	1126	-27	-1120	multi-exon	FALSE	canonical	3	15	junction_1	34.7235110871902	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTAATCATCCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	88925813	88985224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.39	chr8	+	4034	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-25	1079	intron_retention	FALSE	canonical	3	98	junction_5	15.7967461865615	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATTTTTGTATTGCCTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	88925815	88985118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.40	chr8	+	4489	12	NIC	ENSMUSG00000036779.13	novel	4597	13	NA	NA	-24	2	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	49.630202747857	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925816	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88925942_88926584_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.41	chr8	+	4438	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.2136449104976	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925816	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975812_88977325_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.42	chr8	+	4466	13	NIC	ENSMUSG00000036779.13	novel	4597	13	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	46.5447067046536	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTTAGTTTGCCTGC	NA	False	NA	9	True	AGTAAA	-10	NA	88925826	88986345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88925942_88926584_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.43	chr8	+	4615	13	FSM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	-15	-3	-14	3	multi-exon	FALSE	canonical	1	6	junction_1	36.9785035151806	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGCTCATTTGT	NA	False	NA	17	True	AGTAAA	-18	NA	88925826	88986353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88925942_88926584_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.44	chr8	+	7952	1	Genic_Genomic	ENSMUSG00000036779.13	novel	NA	NA	NA	NA	-14	-42061	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAACTATTGTATTAAC	NA	False	NA	NA	False	NA	NA	NA	88925826	88933778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_88925800_88933800
ES.33527.45	chr8	+	4407	12	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	48.5095202379802	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925826	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.46	chr8	+	4573	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.4977452442203	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTTAGTTTGCCTG	NA	False	NA	8	True	AGTAAA	-9	NA	88925826	88986344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925846_88926521_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.47	chr8	+	4401	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	44.0286365145837	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88925826	88986349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.50	chr8	+	4597	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.24373587051	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88925827	88986349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926597_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.52	chr8	+	5084	11	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-12	2	intron_retention	FALSE	canonical	1	1	junction_10	41.6264339092361	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925828	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88983726
ES.33527.53	chr8	+	4481	13	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	44.9051469457814	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925838	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.54	chr8	+	3402	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-1	-1122	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.4849676057116	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTTTTAATCATCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	88925839	88985222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.55	chr8	+	3932	11	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.8341561979164	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCCTGCTCATTTGTT	NA	False	NA	18	True	AGTAAA	-19	NA	88925840	88986354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88925942_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.56	chr8	+	3470	13	FSM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	-1	1128	0	-1122	multi-exon	FALSE	canonical	1	6	junction_1	36.9785035151806	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTTTTAATCATCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	88925840	88985222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88925942_88926584_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.57	chr8	+	5193	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	1	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.4977452442203	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88925842	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88926202_88926243_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.58	chr8	+	3259	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	2	-1120	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	44.0286365145837	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTTAATCATCCTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	88925843	88985224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.59	chr8	+	4984	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	118	3	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	35.9023008540061	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCCTGCTCATTTGT	NA	False	NA	17	True	AGTAAA	-18	NA	88925959	88986353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.6	chr8	+	3183	16	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.3409341744898	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTGTGTCATACAGA	NA	False	NA	NA	False	AATAAA	-14	NA	88864478	88898653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88864953_88865022_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ES.33527.60	chr8	+	4713	13	NNC	ENSMUSG00000036779.13	novel	739	5	NA	NA	300	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.4977452442203	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88926141	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88926213_88926435_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.61	chr8	+	4799	11	ISM	ENSMUSG00000036779.13	ENSMUST00000066748.10	4489	12	312	-5	311	-1	3prime_fragment	FALSE	canonical	2	9	junction_5	39.1163648617813	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88926152	88986349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.62	chr8	+	4505	13	NNC	ENSMUSG00000036779.13	novel	739	5	NA	NA	312	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.6785387313365	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTAGTTTGCCTGCTC	NA	False	NA	11	True	AGTAAA	-12	NA	88926153	88986347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88926196_88926474_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.63	chr8	+	4485	12	NNC	ENSMUSG00000036779.13	novel	696	4	NA	NA	317	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.8022303996668	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTGCCTGCTCAT	NA	False	NA	13	True	AGTAAA	-14	NA	88926158	88986349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88926204_88926475_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88983726
ES.33527.64	chr8	+	4614	10	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	336	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	55.1805118578007	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCCTGCTCATTTGTT	NA	False	NA	18	True	AGTAAA	-19	NA	88926177	88986354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88983726
ES.33527.65	chr8	+	3522	12	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	342	1076	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	35.9023008540061	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCGATTTTTGTATTGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	88926183	88985115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
ES.33527.66	chr8	+	4715	13	NNC	ENSMUSG00000036779.13	novel	739	5	NA	NA	357	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.1039890849244	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88926198	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88926370_88926475_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977325_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.67	chr8	+	3725	12	ISM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	387	1128	387	-1122	3prime_fragment	FALSE	canonical	3	98	junction_5	15.7967461865615	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGTTTTAATCATCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	88926228	88985222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.68	chr8	+	3311	1	Intergenic	novelGene_27279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCCAGAAATTTTTATC	3248	False	NA	NA	False	NA	NA	NA	88955002	88958313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_88955000_88958300
ES.33527.69	chr8	+	3975	10	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	-1974	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	40.2298949096868	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTAGTTTGCCTGCTCA	NA	False	NA	12	True	AGTAAA	-13	NA	88969938	88986348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977478_88978582_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.70	chr8	+	3646	8	NIC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	1102	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.4687738032274	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTAGTTTGCCTGCT	NA	False	NA	10	True	AGTAAA	-11	NA	88973014	88986346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88973114_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ES.33527.8	chr8	+	3133	16	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_15	71.3409341744898	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88864485	88898655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486_88898455_88898569
ES.33527.9	chr8	+	4998	15	NNC	ENSMUSG00000031657.17	novel	3251	15	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_13	73.7851611098058	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTGTGTCATACAGA	NA	False	NA	NA	False	AATAAA	-14	NA	88864485	88898653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88892209_88892420_88893801_88897486
ES.33528.1	chr8	+	6123	28	FSM	ENSMUSG00000031659.14	ENSMUST00000169037.9	5198	28	1	-926	1	3	multi-exon	FALSE	canonical	0	0	junction_1	1.30526001383008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTTTGAATGAAAGTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	88999031	89056593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_88999242_89021654_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ES.33528.2	chr8	+	5720	26	NIC	ENSMUSG00000031659.14	novel	5198	28	NA	NA	182	-2	intron_retention	FALSE	canonical	0	0	junction_1	1.32664991614216	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGGTGTTTTGAATGA	NA	False	NA	NA	False	ATTAAA	-12	NA	88999212	89056587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_88999242_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ES.33528.3	chr8	+	5360	21	NIC	ENSMUSG00000031659.14	novel	5937	28	NA	NA	-1600	0	intron_retention	FALSE	canonical	0	0	junction_1	1.43178210632764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGTTTTGAATGAAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	89037284	89056590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052829_89053018_89053134_89054000_89054126_89054299
ES.33528.4	chr8	+	4708	7	NIC	ENSMUSG00000031659.14	novel	5937	28	NA	NA	10558	0	intron_retention	FALSE	canonical	0	0	junction_2	0.957427107756338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGTTTTGAATGAAAG	7741	False	NA	NA	False	ATTAAA	-15	NA	89049442	89056590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89049662_89050259_89051228_89051386_89051543_89051994_89052829_89053018_89053134_89054000_89054126_89054299
ES.33528.5	chr8	+	4992	1	Genic_Genomic	ENSMUSG00000031659.14	novel	NA	NA	NA	NA	15550	2836	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTCAATGTCATCTTA	1207	False	NA	NA	False	AATAAA	-19	NA	89054434	89059426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_89054400_89059400
ES.33529.1	chr8	-	174	1	Intergenic	novelGene_27271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	88873744	88873570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88873600_88873700
ES.3353.1	chr10	-	4609	4	NNC	ENSMUSG00000035278.10	novel	564	2	NA	NA	44	6205	intron_retention	FALSE	canonical	1	2	junction_1	562.254983674371	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	80634350	80625727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80629602_80632424_80632657_80633606_80633674_80633914
ES.3353.10	chr10	-	2299	3	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	-6	2	intron_retention	FALSE	canonical	3	953	junction_2	146	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCGGAATGAGTGGAGA	NA	False	NA	-1	True	AATAAA	-19	NA	80634400	80631930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80633812_80633914
ES.3353.11	chr10	-	1177	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-316	-328	16	1	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCGGAATGAGTGGAG	NA	False	NA	-2	True	AATAAA	-18	NA	80634444	80631931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
ES.3353.12	chr10	-	1174	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634411	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.13	chr10	-	1031	4	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	34	0	intron_retention	FALSE	canonical	3	943	junction_1	132.998746861264	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634094	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632489_80632565_80632657_80633606_80633812_80633914
ES.3353.14	chr10	-	543	5	NNC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	507.812219230692	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80633718	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80632172_80632318_80632357_80632424_80632489_80632565_80632657_80633606
ES.3353.15	chr10	-	849	5	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	12	0	intron_retention	FALSE	canonical	3	211	junction_2	419.843646492358	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634016	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633812_80633914
ES.3353.16	chr10	-	1349	4	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634403	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
ES.3353.17	chr10	-	1041	5	NIC	ENSMUSG00000035278.10	novel	533	5	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	549.104042964537	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634346	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633914
ES.3353.18	chr10	-	1644	3	NIC	ENSMUSG00000035278.10	novel	734	4	NA	NA	49	0	intron_retention	FALSE	canonical	3	26	junction_2	609.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634345	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632657_80633356
ES.3353.2	chr10	-	7045	3	NIC	ENSMUSG00000035278.10	novel	734	4	NA	NA	-12	6203	intron_retention	FALSE	canonical	3	26	junction_2	458.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80633551	80625729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632489_80632565_80632657_80633356
ES.3353.20	chr10	-	1214	4	NIC	ENSMUSG00000035278.10	novel	533	5	NA	NA	-21	0	intron_retention	FALSE	canonical	3	76	junction_3	490.552296453248	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634415	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632489_80632565_80632657_80633606_80633674_80633914
ES.3353.21	chr10	-	1075	4	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_3	509.183878596153	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634411	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633914
ES.3353.23	chr10	-	1128	3	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	46	junction_2	599.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634387	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632657_80633914
ES.3353.24	chr10	-	2476	1	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-15	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634409	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80631900_80634400
ES.3353.25	chr10	-	1199	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-30	0	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634323	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.28	chr10	-	1082	3	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	-40	0	intron_retention	FALSE	canonical	3	953	junction_2	138.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	False	NA	-4	True	AATAAA	-16	NA	80634068	80631933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632657_80633606_80633812_80633914
ES.3353.29	chr10	-	2035	2	FSM	ENSMUSG00000035278.10	ENSMUST00000217735.2	496	2	-44	-1495	-44	-1	multi-exon	FALSE	canonical	3	953	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGTCGGAATGAGTG	NA	False	NA	-5	True	AATAAA	-15	NA	80634072	80631934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80633812_80633914
ES.3353.3	chr10	-	3000	3	NIC	ENSMUSG00000035278.10	novel	533	5	NA	NA	31	1694	intron_retention	FALSE	canonical	3	76	junction_2	577	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTCCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	80634429	80630238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632657_80633606_80633674_80633914
ES.3353.30	chr10	-	918	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	943	junction_1	121.18451840066	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGTCGGAATGAGTG	NA	False	NA	-5	True	AATAAA	-15	NA	80634052	80631934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.31	chr10	-	884	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-45	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	456.29402801264	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGTCGGAATGAGTG	NA	False	NA	-5	True	AATAAA	-15	NA	80634073	80631934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80632357_80632424_80632502_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.32	chr10	-	906	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	453.605114609613	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGTCGGAATGAGT	NA	False	NA	-6	True	AATAAA	-14	NA	80634087	80631935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80632357_80632424_80632511_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.33	chr10	-	851	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	454.373238648581	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGTCGGAATGAGT	NA	False	NA	-6	True	AATAAA	-14	NA	80634073	80631935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80632357_80632424_80632470_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.34	chr10	-	1356	3	NIC	ENSMUSG00000035278.10	novel	734	4	NA	NA	-40	0	intron_retention	FALSE	canonical	3	26	junction_2	458.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGTCGGAATGAGT	NA	False	NA	-6	True	AATAAA	-14	NA	80634068	80631935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632489_80632565_80632657_80633356
ES.3353.35	chr10	-	860	4	NIC	ENSMUSG00000035278.10	novel	533	5	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	76	junction_3	547.570594129703	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCATGTCGGAATGAG	NA	False	NA	-7	True	AATAAA	-13	NA	80634055	80631936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633914
ES.3353.36	chr10	-	1454	3	FSM	ENSMUSG00000035278.10	ENSMUST00000218036.2	772	3	-686	4	-14	-1	multi-exon	FALSE	canonical	3	1230	junction_2	7.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCCATGTCGGAATGAG	NA	False	NA	-7	True	AATAAA	-13	NA	80634408	80631936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80632357_80632424_80632657_80633606
ES.3353.4	chr10	-	3476	1	Genic_Genomic	ENSMUSG00000035278.10	novel	NA	NA	NA	NA	8	1694	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTCCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	80633714	80630238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_80630200_80633700
ES.3353.5	chr10	-	3129	3	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	-26	1694	intron_retention	FALSE	canonical	3	953	junction_2	138.5	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTTCCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	80634420	80630238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80632657_80633606_80633812_80633914
ES.3353.6	chr10	-	1530	1	Genic_Genomic	ENSMUSG00000035278.10	novel	NA	NA	NA	NA	-185	626	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACTGGCTCAAGTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	80632836	80631306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_80631300_80632800
ES.3353.7	chr10	-	1540	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	-277	-3	-277	3	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCGGAATGAGTGGAGAA	NA	False	NA	0	True	AATAAA	-20	NA	80634737	80631929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ES.3353.8	chr10	-	2029	3	ISM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	291	-6	25	3	intron_retention	FALSE	canonical	3	943	junction_2	151	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCGGAATGAGTGGAGAA	NA	False	NA	0	True	AATAAA	-20	NA	80634103	80631929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80632357_80632424_80632489_80632565
ES.3353.9	chr10	-	1588	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	-322	-5	-256	2	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCGGAATGAGTGGAGA	NA	False	NA	-1	True	AATAAA	-19	NA	80634716	80631930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
ES.33530.1	chr8	-	177	1	Intergenic	novelGene_27272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88881274	88881097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88881100_88881300
ES.33531.1	chr8	-	2893	3	Antisense	novelGene_ENSMUSG00000031657.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	88886234	88882123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88883454_88883678_88883764_88884756
ES.33532.1	chr8	-	177	1	Intergenic	novelGene_27273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88892423	88892246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88892200_88892400
ES.33532.2	chr8	-	158	2	Antisense	novelGene_ENSMUSG00000062704.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	88937078	88892265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88892295_88936949
ES.33532.3	chr8	-	172	1	Intergenic	novelGene_27275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATCTGAC	NA	False	NA	NA	False	NA	NA	NA	88914873	88914701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88914700_88914900
ES.33532.4	chr8	-	175	2	Antisense	novelGene_ENSMUSG00000036779.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATCTGAC	NA	False	NA	NA	False	NA	NA	NA	88937077	88914701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88914798_88936998
ES.33532.5	chr8	-	175	2	Antisense	novelGene_ENSMUSG00000036779.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	88937079	88918889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88918905_88936919
ES.33532.6	chr8	-	176	2	Antisense	novelGene_ENSMUSG00000031659.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTATTTATTTA	1925	False	NA	NA	False	NA	NA	NA	89013754	88918889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_88918905_89013593
ES.33532.7	chr8	-	164	1	Intergenic	novelGene_27277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAATTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	88924675	88924511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88924500_88924700
ES.33532.8	chr8	-	209	1	Intergenic	novelGene_27278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGACAAGGAAAAATAATCT	NA	False	NA	NA	False	NA	NA	NA	88937079	88936870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_88936900_88937100
ES.33532.9	chr8	-	193	1	Intergenic	novelGene_27280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAAGCACATG	1925	False	NA	NA	False	NA	NA	NA	89013754	89013561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89013600_89013800
ES.33533.1	chr8	-	4390	1	Antisense	novelGene_ENSMUSG00000031659.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTAGGCTTGTCTCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	89056739	89052349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_89052300_89056700
ES.33534.1	chr8	-	4074	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	12	-461	12	441	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTTATGTAAGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	89088810	89057225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.10	chr8	-	2443	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	-71	1253	-71	475	multi-exon	FALSE	canonical	3	463	junction_12	36.2439650148821	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89088893	89058939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.12	chr8	-	2262	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	20	475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	131.267602986228	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89088802	89058939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081312_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.13	chr8	-	5420	3	FSM	ENSMUSG00000031660.14	ENSMUST00000139675.8	1746	3	-3180	-494	-3180	475	multi-exon	FALSE	canonical	3	554	junction_2	17.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89065295	89058939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89059653_89060365_89060510_89060732
ES.33534.15	chr8	-	2284	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	55	475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	202.007696326155	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89088587	89058939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059327_89059508_89059653_89060365_89060502_89060728_89060845_89063708_89063766_89066036_89066145_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.19	chr8	-	2475	18	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	96	475	intron_retention	FALSE	canonical	0	0	junction_1	233.547265579188	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCGCTGGTGTGTCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	89088546	89058939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059260_89059327_89059508_89059653_89060365_89060508_89060732_89060845_89060932_89061053_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129
ES.33534.2	chr8	-	3344	18	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	12	441	intron_retention	TRUE	non_canonical	0	0	junction_1	168.848696627902	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTTTATGTAAGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	89088810	89057225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89057638_89057668_89058071_89059106_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.21	chr8	-	2318	19	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	57	474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.158263921897	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCGCTGGTGTGTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	89088585	89058940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059260_89059350_89059508_89059653_89060365_89060510_89060732_89060845_89060957_89061053_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.22	chr8	-	2395	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	-3	474	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	130.063190771832	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCGCTGGTGTGTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	89088825	89058940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059508_89059653_89060365_89060531_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.23	chr8	-	4113	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	-24	474	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_15	129.660599619738	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCGCTGGTGTGTCAG	NA	False	NA	-7	True	AATAAA	-18	NA	89088846	89058940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89086411_89088339_89088533
ES.33534.27	chr8	-	2256	18	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	52	473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.919914761734	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088590	89058941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059508_89059653_89060365_89060508_89060732_89060845_89060932_89061053_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.28	chr8	-	2558	16	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	303	473	intron_retention	FALSE	canonical	0	0	junction_15	204.558212306967	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088339	89058941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084220_89084527_89084658_89086411_89086554_89088129
ES.33534.30	chr8	-	5907	13	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	46	473	intron_retention	FALSE	canonical	0	0	junction_4	196.388362406964	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088596	89058941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059327_89059508_89059653_89060365_89060510_89060732_89060845_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89088339_89088533
ES.33534.31	chr8	-	5842	16	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	3	473	intron_retention	FALSE	canonical	3	37	junction_4	126.698417073336	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088819	89058941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89088339_89088533
ES.33534.32	chr8	-	2498	17	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	46	473	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	172.647389478526	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088596	89058941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059327_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071577_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.34	chr8	-	2477	16	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	46	469	intron_retention	FALSE	canonical	3	463	junction_11	32.0534276204936	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGGCTCGCTGGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	89088596	89058945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.35	chr8	-	2248	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	22	1355	22	373	multi-exon	FALSE	canonical	3	463	junction_12	36.2439650148821	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTGTAAATTGTGTT	NA	False	NA	-108	True	NA	NA	NA	89088800	89059041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.36	chr8	-	2183	16	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	33	1746	33	1	5prime_fragment	FALSE	canonical	3	463	junction_11	32.0534276204936	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTTGTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-36	NA	89088789	89059432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.4	chr8	-	3819	18	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	54	439	intron_retention	FALSE	non_canonical	0	0	junction_1	127.418200912881	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTTATGTAAGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	89088588	89057227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89057638_89057668_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.5	chr8	-	3086	3	FSM	ENSMUSG00000031660.14	ENSMUST00000139675.8	1746	3	866	-2206	-700	439	multi-exon	FALSE	canonical	3	554	junction_2	17.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTTATGTAAGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	89061249	89057227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89059653_89060365_89060510_89060732
ES.33534.6	chr8	-	6197	16	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	69	439	intron_retention	FALSE	canonical	0	0	junction_1	229.449331129022	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTTATGTAAGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	89088573	89057227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89058071_89059106_89059170_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89087865_89088129_89088339_89088533
ES.33534.7	chr8	-	4100	5	ISM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	23358	-459	-3349	439	3prime_fragment	FALSE	canonical	3	501	junction_4	36.8942746235781	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTTATGTAAGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	89065464	89057227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708
ES.33534.8	chr8	-	5353	16	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	54	476	intron_retention	FALSE	canonical	3	463	junction_11	37.259092849934	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088588	89058938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ES.33534.9	chr8	-	5478	18	NNC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	45	476	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	199.634215677584	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGCTGGTGTGTCAGCT	NA	False	NA	-5	True	AATAAA	-20	NA	89088597	89058938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89060932_89061053_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89087865_89088129_89088339_89088533
ES.33535.1	chr8	+	4026	11	NNC	ENSMUSG00000031661.13	novel	3035	10	NA	NA	-48	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	8.15414005275847	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCATTTAAATGTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	89247933	89321515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187_89319733_89320058
ES.33535.2	chr8	+	3062	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	-28	1	-28	-1	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTGTTTCACATCCT	NA	False	NA	NA	False	NA	NA	NA	89247953	89320245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33535.3	chr8	+	4953	10	NNC	ENSMUSG00000031661.13	novel	3035	10	NA	NA	-25	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	8.56348838577675	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCATTTAAATGTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	89247956	89321515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317761_89317845
ES.33535.4	chr8	+	2233	9	NIC	ENSMUSG00000031661.13	novel	3035	10	NA	NA	-10	536	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.91277173498794	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGT	NA	False	NA	NA	False	NA	NA	NA	89247971	89319501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89248160_89248274_89248308_89248914_89249049_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33535.5	chr8	+	4398	10	NNC	ENSMUSG00000031661.13	novel	3035	10	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.13466898565472	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATATCTCCCATTTAAA	NA	False	NA	NA	False	AATAAA	-11	NA	89247986	89321508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316249_89316441_89317350_89317479_89318187
ES.33535.6	chr8	+	1846	11	NNC	ENSMUSG00000031661.13	novel	3035	10	NA	NA	5	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.0404183179786	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTTGTGGGGATCATGT	NA	False	NA	NA	False	AGTAAA	-10	NA	89247986	89318951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309435_89309547_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33535.7	chr8	+	1737	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	5	1293	5	-12	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTGTGGGGATCATGTAA	NA	False	NA	NA	False	AGTAAA	-12	NA	89247986	89318953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33535.8	chr8	+	4286	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	14	-1265	14	-1	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTCCCATTTAAATGT	NA	False	NA	NA	False	AATAAA	-14	NA	89247995	89321511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33535.9	chr8	+	2290	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	15	730	15	551	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGTGGTTTCCCAAGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	89247996	89319516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ES.33536.1	chr8	-	176	1	Intergenic	novelGene_27281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	89327133	89326957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89327000_89327100
ES.33537.1	chr8	-	2398	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	-94	-605	-94	605	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCGAGCTCAGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	89362850	89352585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
ES.33537.2	chr8	-	1671	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	28	0	1	0	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGCAGGATGGAGAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	89362728	89353190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
ES.33537.3	chr8	-	1411	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	17	271	-10	-271	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCACAGTGCTTGTGAG	NA	False	NA	-6	True	AATAAA	-21	NA	89362739	89353461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
ES.33537.4	chr8	-	1056	1	NIC	ENSMUSG00000031662.9	novel	1699	4	NA	NA	8211	-272	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCACAGTGCTTGTGA	NA	False	NA	-7	True	AATAAA	-20	NA	89354518	89353462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89353500_89354500
ES.33538.1	chr8	+	4650	13	FSM	ENSMUSG00000055994.16	ENSMUST00000118370.8	4653	13	1	2	1	-2	multi-exon	TRUE	canonical	0	0	junction_7	1.42156017576933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTTACTGAAGCTCT	NA	False	NA	NA	False	TATAAA	-20	NA	89373943	89415100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325_89392142_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
ES.33538.2	chr8	+	3183	4	FSM	ENSMUSG00000055994.16	ENSMUST00000124091.2	2602	4	-31	-550	-31	550	multi-exon	FALSE	canonical	2	2	junction_2	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCTGGTTTCAAGTC	NA	False	NA	NA	False	NA	NA	NA	89373980	89392878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325
ES.33538.3	chr8	+	4667	13	NNC	ENSMUSG00000055994.16	novel	4653	13	NA	NA	-30	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.51840559652405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATCCCCCAAACTTG	NA	False	NA	NA	False	NA	NA	NA	89373981	89415141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325_89392156_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
ES.33538.4	chr8	+	4808	12	NNC	ENSMUSG00000055994.16	novel	4719	13	NA	NA	1613	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.14991914915214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGGTCTTTCTGTGGTT	NA	False	NA	NA	False	GGGGCT	-40	NA	89379581	89414907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89379960_89387166_89387273_89389791_89392142_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
ES.33539.1	chr8	+	4643	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-66	-101	-19	101	multi-exon	TRUE	canonical	3	35	junction_1	10.7172466146861	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCGTCCATCTTGTAA	NA	False	NA	109	True	TATAAA	-12	NA	89423636	89475184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.10	chr8	+	7982	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	15.6912346152239	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCTCTCTCCTTGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	89423673	89478566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456092_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.12	chr8	+	3511	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.8893940076518	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGATATGAAATCATTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	89423674	89474012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89428935_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457397_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.13	chr8	+	3430	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-28	1074	0	-15	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGGATATGAAATCATT	NA	False	NA	NA	False	AATAAA	-16	NA	89423674	89474009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.14	chr8	+	4669	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	1	-32	1	32	multi-exon	FALSE	canonical	3	5	junction_1	16.8699483019167	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTCCTTGGTTTTA	NA	False	NA	40	True	TATAAA	-22	NA	89423675	89475115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.15	chr8	+	4758	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	2	31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.5195392649283	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTACTCCTTGGTTTT	NA	False	NA	39	True	TATAAA	-21	NA	89423676	89475114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89428935_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.17	chr8	+	3779	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-6	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.1676566561413	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTACTCCTTGGTTTTAT	NA	False	NA	41	True	TATAAA	-23	NA	89423681	89475116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89433716_89433885_89433981_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.18	chr8	+	2947	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.1270269381951	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGAAATCATTTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	89423682	89474015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89431853_89432508_89433720_89433885_89433981_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.19	chr8	+	3372	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	-3	-188	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	20.1059477505562	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTATGTTTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	89423684	89473836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89428935_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456092_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.2	chr8	+	8376	19	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.0403670064221	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTTGATTTCTTCAG	NA	False	NA	NA	False	ATTAAA	-19	NA	89423657	89478573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423728_89428932_89429067_89429487_89429719_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.20	chr8	+	3328	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-5	-188	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTATGTTTGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	89423697	89473836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.21	chr8	+	8059	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCTTGATTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	89423699	89478569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.22	chr8	+	4680	17	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-2	108	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATCTTGTAATCTTTGT	NA	False	NA	116	True	TATAAA	-19	NA	89423700	89475191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.23	chr8	+	3016	16	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-2	251	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	16.4059609762902	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAAATGTCCATTTTTG	NA	False	NA	NA	False	GATAAA	-13	NA	89423700	89474275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89423728_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.24	chr8	+	4099	16	NIC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	-1	34	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	19.4472505911647	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTCCTTGGTTTTATT	NA	False	NA	42	True	TATAAA	-24	NA	89423701	89475117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.25	chr8	+	4795	19	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.6915173172218	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	False	NA	8	True	TATAAA	-17	NA	89423712	89475083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89428404_89428506_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.26	chr8	+	4114	15	NNC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	15	105	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	18.0119008277464	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCATCTTGTAATCTT	NA	False	NA	113	True	TATAAA	-16	NA	89423717	89475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.27	chr8	+	8172	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6860353881492	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCTCCTTGATTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	89423721	89478570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.28	chr8	+	4842	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	0	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1549362015164	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCACTTTACTCCTTGG	1701	False	NA	35	True	TATAAA	-44	NA	89428933	89475110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89429067_89429487_89429719_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.29	chr8	+	4585	16	NNC	ENSMUSG00000036712.16	novel	7945	16	NA	NA	2	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.0077106696411	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGTAATCTTTGTAC	4619	False	NA	118	True	TATAAA	-21	NA	89431851	89475193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473434
ES.33539.3	chr8	+	3279	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-45	1242	2	-183	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTGTGTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	89423657	89473841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.30	chr8	+	4446	16	FSM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	3	3496	3	0	multi-exon	FALSE	canonical	3	38	junction_5	9.78888258292142	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGAGTCTATAAATAT	4620	False	NA	2	True	TATAAA	-11	NA	89431852	89475077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.31	chr8	+	6830	14	ISM	ENSMUSG00000036712.16	ENSMUST00000209206.2	4032	15	3485	-3496	569	0	3prime_fragment	FALSE	canonical	3	18	junction_5	13.4771338234312	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTTGATTTCTTCAG	5186	False	NA	NA	False	ATTAAA	-19	NA	89432418	89478573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.32	chr8	+	3544	14	NNC	ENSMUSG00000036712.16	novel	7945	16	NA	NA	4670	34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.4867659173594	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTCCTTGGTTTTATT	9287	False	NA	42	True	TATAAA	-24	NA	89436519	89475117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89436625_89445908_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.33	chr8	+	5232	12	NIC	ENSMUSG00000036712.16	novel	7945	16	NA	NA	-10858	105	intron_retention	FALSE	canonical	3	38	junction_2	10.8795053363485	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCATCTTGTAATCTT	NA	False	NA	113	True	TATAAA	-16	NA	89445042	89475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.34	chr8	+	5158	8	NIC	ENSMUSG00000036712.16	novel	3119	10	NA	NA	2126	105	intron_retention	FALSE	canonical	3	49	junction_5	8.91913787359312	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCATCTTGTAATCTT	NA	False	NA	113	True	TATAAA	-16	NA	89458311	89475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89471575_89471836_89472054_89473456
ES.33539.35	chr8	+	3709	1	NIC	ENSMUSG00000036712.16	novel	8022	17	NA	NA	9741	105	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCATCTTGTAATCTT	NA	False	NA	113	True	TATAAA	-16	NA	89471479	89475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89471500_89475200
ES.33539.4	chr8	+	4521	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	-45	0	2	0	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	False	NA	8	True	TATAAA	-17	NA	89423657	89475083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.6	chr8	+	3674	18	NNC	ENSMUSG00000036712.16	novel	4638	18	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.5195392649283	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGAAATCATTTTCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	89423661	89474015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_89423822_89428935_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.7	chr8	+	3853	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	-13	798	6	261	multi-exon	FALSE	canonical	3	5	junction_1	16.8699483019167	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTTGATTTGTTCTT	NA	False	NA	NA	False	CATAAA	-4	NA	89423661	89474285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.8	chr8	+	4065	15	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-6	101	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	14.0152977645347	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCGTCCATCTTGTAA	NA	False	NA	109	True	TATAAA	-12	NA	89423668	89475184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.33539.9	chr8	+	2885	15	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	-1	-15	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	14.0152977645347	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGGATATGAAATCATT	NA	False	NA	NA	False	AATAAA	-16	NA	89423673	89474009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ES.3354.1	chr10	+	1342	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	-266	1	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTGTGTCCTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	80662223	80665125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ES.3354.10	chr10	+	902	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	-115	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTATTGCTGTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	80662519	80665003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
ES.3354.11	chr10	+	2449	3	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	7082	junction_1	44	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662520	80665124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80664217_80664294_80664468_80664544
ES.3354.13	chr10	+	1017	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662520	80665119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
ES.3354.14	chr10	+	2340	3	NIC	ENSMUSG00000035242.16	novel	538	5	NA	NA	1	-107	intron_retention	FALSE	canonical	3	6566	junction_2	302	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTTTAAGATGGTCA	NA	False	NA	-94	True	AATAAA	-21	NA	80662520	80665011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80664468_80664544_80664631_80664704
ES.3354.15	chr10	+	2598	1	FSM	ENSMUSG00000087993.3	ENSMUST00000157368.3	74	1	-2110	-414	-2110	414	mono-exon	FALSE	NA	NA	NA	NA	NA	965	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80662500_80665100
ES.3354.16	chr10	+	999	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	-113	intron_retention	FALSE	canonical	3	7082	junction_2	297.278021761149	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTGCTGTTTAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	80662520	80665005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544
ES.3354.17	chr10	+	892	4	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	3231.47152582569	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664294_80664468_80664544_80664631_80664704
ES.3354.18	chr10	+	1115	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	6566	junction_3	485.541164292197	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664631_80664704
ES.3354.19	chr10	+	1116	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	6566	junction_3	484.21023900322	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664468_80664544_80664631_80664704
ES.3354.2	chr10	+	967	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	-5	-107	intron_retention	FALSE	canonical	3	6566	junction_4	420.790624895565	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTTTAAGATGGTCA	NA	False	NA	-94	True	AATAAA	-21	NA	80662484	80665011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ES.3354.20	chr10	+	1005	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	-111	intron_retention	FALSE	canonical	3	6566	junction_3	484.21023900322	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCTGTTTAAGATG	NA	False	NA	-98	True	AATAAA	-17	NA	80662520	80665007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664468_80664544_80664631_80664704
ES.3354.21	chr10	+	801	5	NNC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	1	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3013.66467112716	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTTTATTGCTGTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	80662520	80665002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80662740_80664191_80664217_80664294_80664468_80664544_80664631_80664704
ES.3354.22	chr10	+	1189	3	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	7082	junction_2	335	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294
ES.3354.24	chr10	+	950	5	NNC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_4	3186.42134690314	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662520	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664619_80664780
ES.3354.25	chr10	+	1188	3	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	7170	junction_2	291	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662522	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664468_80664544
ES.3354.27	chr10	+	1308	2	NIC	ENSMUSG00000035242.16	novel	538	5	NA	NA	16	104	intron_retention	FALSE	canonical	3	6566	junction_1	0	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGTGTTTGTCACAC	NA	False	NA	NA	False	AATAAA	-35	NA	80663561	80664943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80664631_80664704
ES.3354.3	chr10	+	1071	5	NIC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662487	80665124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ES.3354.5	chr10	+	2370	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6566	junction_3	266.419885811017	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662519	80665118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80664217_80664294_80664468_80664544_80664631_80664704
ES.3354.6	chr10	+	2528	2	FSM	ENSMUSG00000035242.16	ENSMUST00000179894.2	2526	2	4	-6	0	0	multi-exon	FALSE	canonical	3	7170	junction_1	0	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80664468_80664544
ES.3354.7	chr10	+	1119	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	7082	junction_2	297.278021761149	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544
ES.3354.9	chr10	+	926	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	-107	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGTTTAAGATGGTCA	NA	False	NA	-94	True	AATAAA	-21	NA	80662519	80665011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ES.33540.1	chr8	+	180	1	Intergenic	novelGene_27282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	89661693	89661873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89661700_89661900
ES.33541.1	chr8	-	2616	2	Intergenic	novelGene_27283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATACAATAATAACACA	NA	False	NA	NA	False	AGTAAA	-37	NA	89722034	89718764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89721343_89721996
ES.33542.1	chr8	-	3138	3	Intergenic	novelGene_27284	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATAATTACTGTGAACA	NA	False	NA	NA	False	AATAAA	-19	NA	89746566	89726740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89729597_89740879_89741026_89746430
ES.33543.1	chr8	+	860	3	Antisense	novelGene_ENSMUSG00000031665.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCGCAGCTAATTCTG	NA	False	NA	NA	False	NA	NA	NA	89759293	89770347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_89760025_89768978_89769073_89770312
ES.33543.2	chr8	+	789	3	Antisense	novelGene_ENSMUSG00000031665.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	16	junction_1	4	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89767871	89795942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_89768425_89784011_89784080_89795774
ES.33543.3	chr8	+	376	3	Intergenic	novelGene_27310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	7.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3386	False	NA	NA	False	NA	NA	NA	89779816	89795942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89779957_89784011_89784080_89795774
ES.33543.4	chr8	+	383	2	Intergenic	novelGene_27311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTCCTTCATAAATAAT	3429	False	NA	NA	False	ATTAAA	-15	NA	89779859	89784297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89779957_89784011
ES.33543.5	chr8	+	3581	1	Intergenic	novelGene_27312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89792359	89795940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89792400_89795900
ES.33544.10	chr8	-	5253	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	2141	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATATTGTGTCTGTGTT	NA	False	NA	NA	False	GATAAA	-2	NA	89768649	89753869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768428
ES.33544.11	chr8	-	5262	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1304	-11	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	117.916166076676	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	AATACA	-18	NA	89769486	89753873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89769345
ES.33544.12	chr8	-	5196	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	2443	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	AATACA	-18	NA	89768347	89753873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768179
ES.33544.13	chr8	-	4254	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1341	-11	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	118.5	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	AATACA	-18	NA	89769449	89753873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89759003_89769199
ES.33544.14	chr8	-	4484	5	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1327	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	128.779608246026	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	AATACA	-18	NA	89769463	89753873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89758955_89759786_89760027_89768979_89769150_89769345
ES.33544.15	chr8	-	6688	2	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1276	-11	intron_retention	FALSE	canonical	3	273	junction_1	0	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACATATTGTGTCTG	NA	False	NA	NA	False	AATACA	-18	NA	89769514	89753873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89760027_89768979
ES.33544.16	chr8	-	5212	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1132	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.663470277647	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACAACATATTGTGTC	NA	False	NA	NA	False	AATACA	-16	NA	89769658	89753875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89769565
ES.33544.17	chr8	-	5343	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1303	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	121.663470277647	433	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACAACATATTGTGTC	NA	False	NA	NA	False	AATACA	-16	NA	89769487	89753875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89757881_89758071_89760027_89768979
ES.33544.18	chr8	-	5670	7	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	-8857	-14	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	87.0474008802101	592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAACAACATATTGTGT	NA	False	NA	NA	False	AATACA	-15	NA	89779647	89753876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89774349_89774422_89775330_89775532_89776215_89776356_89779508
ES.33544.19	chr8	-	5120	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	512	-187	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	100.141011689628	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGTGTTGGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	89770278	89754049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89770103
ES.33544.2	chr8	-	5052	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	670	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120	433	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTGTGTCTGTGTTTGT	NA	False	NA	NA	False	GATAAA	-5	NA	89770120	89753866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89770103
ES.33544.24	chr8	-	6493	1	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	9696	-739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89761094	89754601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89754600_89761100
ES.33544.25	chr8	-	5690	3	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	-39	-739	intron_retention	FALSE	canonical	3	24	junction_2	124.5	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89770829	89754601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89760027_89768979_89769073_89770657
ES.33544.27	chr8	-	4892	7	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	-8864	-739	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	93.2255329831908	587	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89779654	89754601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89774349_89774422_89775330_89775532_89776215_89776356_89779568
ES.33544.28	chr8	-	1433	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	13539	-739	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	120	420	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89757251	89754601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89756608_89756699
ES.33544.30	chr8	-	4005	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1275	-739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	121.663470277647	428	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89769515	89754601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89758971_89759801_89760027_89768979
ES.33544.31	chr8	-	4562	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1275	-740	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	117.916166076676	428	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGATCCTGCTGGA	NA	False	NA	-9	True	AATAAA	-16	NA	89769515	89754602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89769345
ES.33544.32	chr8	-	2974	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	455	-742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	120	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACACTTTGATCCTGCTG	NA	False	NA	-11	True	AATAAA	-14	NA	89770335	89754604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89758378_89770009
ES.33544.33	chr8	-	5142	2	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	669	-10086	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	0	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	89770121	89763948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89769073_89770103
ES.33544.34	chr8	-	4333	1	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1117	-11478	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCTGACACCTGCAAGA	NA	False	NA	NA	False	NA	NA	NA	89769673	89765340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_89765300_89769700
ES.33544.35	chr8	-	3305	3	Intergenic	novelGene_27285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	31.5	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	89779686	89772259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774422_89775330_89776356_89779568
ES.33544.36	chr8	-	2354	5	Intergenic	novelGene_27298	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_4	28.6574597618142	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779697	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779568
ES.33544.37	chr8	-	2405	5	Intergenic	novelGene_27297	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	27.8511669414407	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779688	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779508
ES.33544.38	chr8	-	2533	6	Intergenic	novelGene_27296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	54.2232422490577	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779686	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89777159_89777290_89779508
ES.33544.39	chr8	-	2634	4	Intergenic	novelGene_27289	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_2	10.1980390271856	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779662	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774422_89775330_89775532_89776215_89776356_89779508
ES.33544.40	chr8	-	4219	2	Intergenic	novelGene_27287	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	144	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779654	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89776356_89779508
ES.33544.41	chr8	-	1993	5	Intergenic	novelGene_27292	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	49.7945780180935	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779670	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89773761_89774349_89774422_89775330_89775532_89776215_89776356_89779568
ES.33544.42	chr8	-	2624	4	Intergenic	novelGene_27286	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	58.0344725141876	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779640	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774422_89775330_89775532_89776215_89776368_89779508
ES.33544.43	chr8	-	2317	5	Intergenic	novelGene_27293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	50.5494807094989	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779671	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774360_89774422_89775330_89775532_89776215_89776356_89779568
ES.33544.44	chr8	-	2578	4	Intergenic	novelGene_27291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_3	28.3901391331568	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779666	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774422_89775330_89775532_89776215_89776356_89779568
ES.33544.45	chr8	-	2186	6	Intergenic	novelGene_27294	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	59.159445568734	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779673	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89773761_89774349_89774422_89775330_89775532_89776215_89776356_89777159_89777290_89779508
ES.33544.46	chr8	-	2118	4	Intergenic	novelGene_27290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	30.2691628926573	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779662	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89776215_89776356_89779568
ES.33544.47	chr8	-	2383	5	Intergenic	novelGene_27288	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	50.5735850024496	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779654	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776368_89779508
ES.33544.48	chr8	-	2192	6	Intergenic	novelGene_27295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	45.6709973615642	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779673	89772282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775370_89775507_89775532_89776215_89776356_89779568
ES.33544.49	chr8	-	5237	1	Intergenic	novelGene_27299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTCATGTTGTTCTT	NA	False	NA	NA	False	AATAAA	-26	NA	89779688	89774451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89774500_89779700
ES.33544.50	chr8	-	1993	2	Intergenic	novelGene_27301	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	89779666	89774460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89776356_89779568
ES.33544.51	chr8	-	1296	3	Intergenic	novelGene_27300	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28.5	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	89779653	89774460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215_89776356_89779568
ES.33544.52	chr8	-	1369	3	Intergenic	novelGene_27302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_1	12	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	89779666	89774460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215_89776356_89779508
ES.33544.53	chr8	-	1490	4	Intergenic	novelGene_27303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	55.6496980125579	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAAATTTTTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	89779659	89774462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215_89776356_89777159_89777290_89779508
ES.33544.54	chr8	-	1130	3	Intergenic	novelGene_27305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28.5	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	89779671	89774644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215_89776356_89779568
ES.33544.55	chr8	-	1831	2	Intergenic	novelGene_27304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	144	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-43	NA	89779628	89774644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89776356_89779508
ES.33544.56	chr8	-	10308	1	Intergenic	novelGene_27307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAACCTGGGAAACACAGA	NA	False	NA	NA	False	AAAAAG	-7	NA	89785790	89775482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775500_89785800
ES.33544.57	chr8	-	3510	2	Intergenic	novelGene_27306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAACCTGGGAAACACAGA	NA	False	NA	NA	False	AAAAAG	-7	NA	89779676	89775482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215
ES.33544.58	chr8	-	337	3	Intergenic	novelGene_27308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	120	junction_1	12	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	89779673	89775499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89775532_89776215_89776356_89779508
ES.33544.59	chr8	-	642	1	Intergenic	novelGene_27309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGCTGTAGCTAAGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	89779672	89779030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89779000_89779700
ES.33544.7	chr8	-	4234	3	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	1604	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	120	432	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATATTGTGTCTGTGTT	NA	False	NA	NA	False	GATAAA	-2	NA	89769186	89753869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_89755447_89756571_89759047_89769004
ES.33545.1	chr8	-	176	1	Intergenic	novelGene_27313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCCAAATAT	NA	False	NA	NA	False	NA	NA	NA	89807005	89806829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_89806800_89807000
ES.33546.1	chr8	+	178	1	Intergenic	novelGene_27314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGAGCAGATTCCT	NA	False	NA	NA	False	NA	NA	NA	89865827	89866005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89865800_89866000
ES.33547.1	chr8	+	530	3	Intergenic	novelGene_27315	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCGTAATTACGGTTGT	NA	False	NA	NA	False	NA	NA	NA	89894068	89896971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89894130_89895160_89895266_89896607
ES.33547.2	chr8	+	4156	2	Intergenic	novelGene_27316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCAATCAGTACTTA	NA	False	NA	NA	False	NA	NA	NA	89894073	89906139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89894206_89902115
ES.33547.3	chr8	+	511	2	Intergenic	novelGene_27317	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGGTTCTGTCTAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	89894086	89895552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89894206_89895160
ES.33548.1	chr8	+	176	1	Intergenic	novelGene_27318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAACGATAGAA	NA	False	NA	NA	False	NA	NA	NA	89956889	89957065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_89956900_89957100
ES.33549.1	chr8	-	176	1	Intergenic	novelGene_27319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATTCCG	NA	False	NA	NA	False	NA	NA	NA	90276340	90276164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_90276200_90276300
ES.3355.1	chr10	-	3473	2	FSM	ENSMUSG00000051067.9	ENSMUST00000053986.9	3439	2	-31	-3	-31	3	multi-exon	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGTTTAGATATTATTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	80679904	80668631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80671976_80679775
ES.3355.2	chr10	-	2693	3	NNC	ENSMUSG00000051067.9	novel	3439	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACGTTTAGATATTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	80679878	80668634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80669322_80670072_80671976_80679775
ES.3355.3	chr10	-	10150	1	NIC	ENSMUSG00000051067.9	novel	3439	2	NA	NA	848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACGTTTAGATATTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	80678784	80668634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80668600_80678800
ES.3355.4	chr10	-	3016	3	NNC	ENSMUSG00000051067.9	novel	3439	2	NA	NA	-16	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAAGTCAGACGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	80679889	80668643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80669717_80670146_80671976_80679775
ES.33550.1	chr8	-	6314	1	Intergenic	novelGene_27320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	90651022	90644708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_90644700_90651000
ES.33551.1	chr8	+	864	1	Intergenic	novelGene_27321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90998285	90999149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_90998300_90999100
ES.33552.1	chr8	-	3676	7	NIC	ENSMUSG00000043668.14	novel	3356	7	NA	NA	0	323	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.6718699236469	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGAATTTCGGTGCCC	NA	False	NA	NA	False	AATAAA	-25	NA	91074971	90973344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997109_91001259_91001323_91074490
ES.33552.2	chr8	-	3449	7	NIC	ENSMUSG00000043668.14	novel	3356	7	NA	NA	-94	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.6718699236469	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTCCCTTGACTAC	NA	False	NA	NA	False	AATAAA	-18	NA	91075065	90973665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997109_91001259_91001323_91074490
ES.33553.1	chr8	-	1280	3	FSM	ENSMUSG00000110212.2	ENSMUST00000211762.2	1425	3	-13	158	-13	-158	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAATACAAAAC	NA	False	NA	NA	False	NA	NA	NA	91489237	91486248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91487378_91488284_91488358_91489159
ES.33554.1	chr8	+	11573	40	NIC	ENSMUSG00000056608.15	novel	11565	40	NA	NA	-24	-496	combination_of_known_junctions	FALSE	canonical	2	6	junction_32	7.5340995578285	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATTCTTTCTATATATA	NA	False	NA	NA	False	AATAAA	-16	NA	91554955	91780640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_91555543_91576261_91576388_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.10	chr8	+	11199	38	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-59	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.52817934796362	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTCAGCCTCCCTCC	4116	False	NA	7	True	ATTAAA	-18	NA	91635182	91781139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.11	chr8	+	9749	40	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-37	121	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	8.33849938490796	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATTATGTCTCAGAT	4138	False	NA	NA	False	ATTAAA	-26	NA	91635204	91779412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91700551_91700610_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.12	chr8	+	11404	39	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_31	7.04010080826842	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGATGTCAGCCTCCC	4149	False	NA	4	True	ATTAAA	-15	NA	91635215	91781136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.13	chr8	+	15057	39	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-20	4	intron_retention	FALSE	canonical	1	1	junction_5	8.12216283300653	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTCAGCCTCCCTCCG	4155	False	NA	8	True	ATTAAA	-19	NA	91635221	91781140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91700551_91700610_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.14	chr8	+	11302	39	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-6	-46	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_35	7.15247472815124	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAATGGAAGTTTAATTA	4169	False	NA	-42	True	ATTAAA	-24	NA	91635235	91781090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768751_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.15	chr8	+	9918	38	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	1343	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.65041522909063	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGTCAGCCTCCCTC	NA	False	NA	6	True	ATTAAA	-17	NA	91660314	91781138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710172_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.16	chr8	+	10130	38	NIC	ENSMUSG00000056608.15	novel	2964	18	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.48048349433275	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGATGTCAGCCTCCCT	NA	False	NA	5	True	ATTAAA	-16	NA	91681573	91781137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_91681958_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.17	chr8	+	9946	38	NIC	ENSMUSG00000056608.15	novel	2632	11	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.76160503910456	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGTCAGCCTCCCTC	NA	False	NA	6	True	ATTAAA	-17	NA	91682060	91781138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_91682311_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.18	chr8	+	10013	38	NNC	ENSMUSG00000056608.15	novel	2632	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.10864863063183	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGATGTCAGCCTCCC	NA	False	NA	4	True	ATTAAA	-15	NA	91682062	91781136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91682311_91683010_91683343_91699752_91699865_91703528_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.2	chr8	+	12120	41	NNC	ENSMUSG00000056608.15	novel	11565	40	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.72464182645913	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTCAGCCTCCCTCC	NA	False	NA	7	True	ATTAAA	-18	NA	91554980	91781139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91555543_91576261_91576388_91658876_91660491_91682789_91682863_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.20	chr8	+	9977	38	NIC	ENSMUSG00000056608.15	novel	2632	11	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.26167481441434	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCCTCCGTACC	NA	False	NA	12	True	ATTAAA	-23	NA	91682086	91781144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_91682311_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.21	chr8	+	4214	1	Intergenic	novelGene_27326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91687251	91691465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_91687300_91691500
ES.33554.22	chr8	+	9285	36	NNC	ENSMUSG00000056608.15	novel	12008	40	NA	NA	232	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.78853160035933	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATGATGTCAGCCTCC	NA	False	NA	3	True	ATTAAA	-14	NA	91700576	91781135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91700610_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.24	chr8	+	8132	26	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	5296	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	8.24621125123532	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGTCAGCCTCCCTC	NA	False	NA	6	True	ATTAAA	-17	NA	91723486	91781138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769605_91775733_91775839_91777730
ES.33554.25	chr8	+	7576	26	ISM	ENSMUSG00000056608.15	ENSMUST00000048665.8	12008	40	168510	505	5299	-497	3prime_fragment	FALSE	canonical	3	13	junction_2	6.94550214167414	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGATTCTTTCTATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	91723489	91780639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.26	chr8	+	7213	24	NNC	ENSMUSG00000056608.15	novel	11565	40	NA	NA	5692	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	8.49485555430278	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGATGTCAGCCTCCC	NA	False	NA	4	True	ATTAAA	-15	NA	91723882	91781136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753444_91760299_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.27	chr8	+	4421	7	ISM	ENSMUSG00000056608.15	ENSMUST00000209203.2	9213	37	103980	-1847	44761	2	3prime_fragment	FALSE	canonical	3	22	junction_1	6.60807586719967	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGTCAGCCTCCCTC	3772	False	NA	6	True	ATTAAA	-17	NA	91762951	91781138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.28	chr8	+	4328	7	NNC	ENSMUSG00000056608.15	novel	9213	37	NA	NA	44815	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.6852933220587	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATGATGTCAGCCTCC	3826	False	NA	3	True	ATTAAA	-14	NA	91763005	91781135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91763191_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.29	chr8	+	3982	5	ISM	ENSMUSG00000056608.15	ENSMUST00000209203.2	9213	37	108702	-1850	49483	-3	3prime_fragment	FALSE	canonical	3	23	junction_3	5.40254569624358	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCAGCCTCCCTCCGT	8494	False	NA	9	True	ATTAAA	-20	NA	91767673	91781141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.3	chr8	+	5722	16	ISM	ENSMUSG00000056608.15	ENSMUST00000109614.9	11565	40	3	55273	2	4388	intron_retention	FALSE	canonical	2	7	junction_2	4.44222166638871	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGATTATATAGTTCACT	NA	False	NA	NA	False	AATAAA	-19	NA	91555465	91725863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91555543_91576261_91576388_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704
ES.33554.30	chr8	+	3607	2	ISM	ENSMUSG00000056608.15	ENSMUST00000209203.2	9213	37	116665	-1844	57446	-1	3prime_fragment	FALSE	canonical	3	28	junction_1	0	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATGATGTCAGCCTCC	NA	False	NA	3	True	ATTAAA	-14	NA	91775636	91781135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91775839_91777730
ES.33554.4	chr8	+	158	1	Intergenic	novelGene_27323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAACAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	91575075	91575233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_91575100_91575200
ES.33554.5	chr8	+	11463	39	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-429	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.00363490828713	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTCAGCCTCCCTCC	3746	False	NA	7	True	ATTAAA	-18	NA	91634812	91781139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91634965_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761535_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.6	chr8	+	9714	2	NNC	ENSMUSG00000056608.15	novel	2279	5	NA	NA	-81	26769	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	4094	False	NA	NA	False	NA	NA	NA	91635160	91644918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91642384_91642427
ES.33554.7	chr8	+	11761	42	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-81	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.1822708929079	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCCTCCCTCCGTAC	4094	False	NA	11	True	ATTAAA	-22	NA	91635160	91781143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91681874_91681958_91682174_91682311_91682789_91682863_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.8	chr8	+	15904	37	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-64	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	7.72062333567427	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATGATGTCAGCCTCC	4111	False	NA	3	True	ATTAAA	-14	NA	91635177	91781135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705597_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91749561_91750164_91750223_91752007_91752051_91753295_91757313_91759966_91760873_91761532_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33554.9	chr8	+	11402	39	NNC	ENSMUSG00000056608.15	novel	9419	38	NA	NA	-64	-3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	6.76576849062234	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCAGCCTCCCTCCGT	4111	False	NA	9	True	ATTAAA	-20	NA	91635177	91781141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91635264_91658876_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763179_91764034_91764204_91767675_91767816_91768712_91768908_91769469_91769599_91775733_91775839_91777730
ES.33555.1	chr8	-	1698	2	NNC	ENSMUSG00000110332.2	novel	979	2	NA	NA	-23057	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGGCTGGCGTGTCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	91567078	91542773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91543613_91566219
ES.33555.2	chr8	-	222	1	Intergenic	novelGene_27322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAAAATTGCCGG	NA	False	NA	NA	False	AATGAA	-27	NA	91554538	91554316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91554300_91554500
ES.33555.3	chr8	-	1438	2	Antisense	novelGene_ENSMUSG00000056608.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	91562036	91560562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_91561692_91561727
ES.33556.1	chr8	-	1953	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	-68	0	-68	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTTTTTCTATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	91635112	91633159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91633200_91635100
ES.33557.1	chr8	-	4494	1	Antisense	novelGene_ENSMUSG00000056608.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	91660098	91655604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_91655600_91660100
ES.33558.1	chr8	-	3555	1	Intergenic	novelGene_27324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGTAAAAGGACCCAG	NA	False	NA	NA	False	NA	NA	NA	91676185	91672630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91672600_91676200
ES.33558.2	chr8	-	172	1	Intergenic	novelGene_27325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	91676030	91675858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91675900_91676000
ES.33559.1	chr8	-	177	1	Intergenic	novelGene_27327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATCTGAACTA	NA	False	NA	NA	False	NA	NA	NA	91692181	91692004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91692000_91692200
ES.3356.1	chr10	+	3112	16	NNC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-717	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6051136007927	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80690391	80704542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80690440_80690968_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702550_80703233
ES.3356.2	chr10	+	4518	13	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	-25	-515	-25	515	intron_retention	FALSE	canonical	3	19	junction_5	6.75771164423776	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCAAAACAAAGCAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80691083	80705057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885
ES.3356.3	chr10	+	3616	14	ISM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	-9	1	-9	-1	intron_retention	FALSE	canonical	3	19	junction_5	6.4925993372336	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCTCCTGTCCTGTGA	NA	False	NA	10	True	ATTAAA	-18	NA	80691099	80704541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
ES.3356.4	chr10	+	2877	15	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	9.35387074740632	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691103	80704542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ES.3356.8	chr10	+	2850	15	NNC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.842253283118	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCTCCTGTCCTGTGA	NA	False	NA	10	True	ATTAAA	-18	NA	80691147	80704541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699905_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702550_80703233
ES.3356.9	chr10	+	4264	11	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_6	12.2723265927859	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGTGGCCTCCTGTCCT	NA	False	NA	6	True	ATTAAA	-14	NA	80691163	80704537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80691223_80697179_80697300_80698013_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699905_80699989_80700954_80701037_80701143_80701352_80701441_80701964_80702333
ES.33560.1	chr8	-	167	1	Intergenic	novelGene_27328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAGATT	3998	False	NA	NA	False	NA	NA	NA	91709341	91709174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91709200_91709300
ES.33561.1	chr8	+	1356	2	Antisense	novelGene_ENSMUSG00000089179.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	91787373	91789350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_91787736_91788356
ES.33561.2	chr8	+	3168	2	Antisense	novelGene_ENSMUSG00000089179.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAATTTTTAAAGTAAAT	NA	False	NA	NA	False	AAAAAG	-4	NA	91787379	91791168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_91787736_91788356
ES.33561.3	chr8	+	2481	2	Intergenic	novelGene_27329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAATTTTTAAAGTAAAT	NA	False	NA	NA	False	AAAAAG	-4	NA	91788476	91791168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_91789140_91789350
ES.33562.1	chr8	+	4924	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	2	-1	2	1	multi-exon	FALSE	canonical	3	13	junction_12	4.6442610819949	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTTAGTTATATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	91796686	91850473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.10	chr8	+	2240	3	ISM	ENSMUSG00000031666.16	ENSMUST00000209518.2	4792	22	44585	-1	-386	1	3prime_fragment	FALSE	canonical	3	16	junction_2	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGTTTAGTTATATT	NA	False	NA	NA	False	AATAAA	-14	NA	91841370	91850471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_91841878_91842289_91842455_91848903
ES.33562.2	chr8	+	3616	21	NNC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	0	21	intron_retention	FALSE	canonical	0	0	junction_6	6.66033032213868	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGACTTTTTTTTTTTC	NA	False	NA	NA	False	AGTAAA	-34	NA	91796697	91842736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812311_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289
ES.33562.3	chr8	+	4876	22	NNC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_16	6.49646685765833	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGTTTAGTTATATT	NA	False	NA	NA	False	AATAAA	-14	NA	91796719	91850471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833698_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.4	chr8	+	7653	21	NIC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	-2	1	intron_retention	FALSE	canonical	3	13	junction_11	4.75394572960189	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTGTTTAGTTATATT	NA	False	NA	NA	False	AATAAA	-14	NA	91796719	91850471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_91797035_91800770_91800902_91802542_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.5	chr8	+	5025	23	NNC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	7.75556318590588	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTTTAGTTATATTG	NA	False	NA	NA	False	AATAAA	-15	NA	91796719	91850472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826253_91826389_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.7	chr8	+	8136	22	NNC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	9	1	intron_retention	FALSE	canonical	0	0	junction_1	6.27632776784587	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTTAGTTATATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	91796730	91850473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91800291_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.8	chr8	+	4836	22	NNC	ENSMUSG00000031666.16	novel	4925	22	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	3	junction_14	6.00377809999028	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTCTGTTTAGTTATA	NA	False	NA	NA	False	AATAAA	-12	NA	91796739	91850469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832938_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33562.9	chr8	+	4526	19	NNC	ENSMUSG00000031666.16	novel	863	5	NA	NA	12015	-4	intron_retention	FALSE	canonical	1	1	junction_1	6.27064491534332	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTCTCTGTTTAGTT	8383	False	NA	NA	False	AATAAA	-9	NA	91808800	91850466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_91809155_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ES.33563.1	chr8	+	178	1	Antisense	novelGene_ENSMUSG00000031667.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	91858804	91858982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_91858800_91859000
ES.33564.1	chr8	-	3986	10	NNC	ENSMUSG00000031667.17	novel	738	7	NA	NA	-1	15127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.685445378482	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTTTCTTTTTCTAA	NA	False	NA	NA	False	AATAAA	-15	NA	91860626	91823284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91826331_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.11	chr8	-	2158	11	NIC	ENSMUSG00000031667.17	novel	1171	10	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	165.453437558728	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTATTTTTTTAACTT	NA	False	NA	-7	True	AATAAA	-13	NA	91860619	91850130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91858464_91858518_91860527
ES.33564.12	chr8	-	2213	11	NNC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	-1200	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	160.136316930295	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAGCTGTTAAATAATT	NA	False	NA	-75	True	AATAAA	-16	NA	91862293	91850198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91862110
ES.33564.13	chr8	-	1778	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	21	280	-9	-280	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAATTTATAAGTGCTT	NA	False	NA	29	True	AATATA	-10	NA	91860634	91850476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.15	chr8	-	5338	7	NNC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	7	-313	intron_retention	TRUE	non_canonical	0	0	junction_6	197.057309768842	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGCTCCTTTTCAA	NA	False	NA	-4	True	AATAAA	-32	NA	91860618	91850509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851512_91852444_91852553_91852652_91853403_91853492_91853558_91856227_91857781_91858550_91858797_91859004
ES.33564.17	chr8	-	4657	9	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	623	-320	intron_retention	TRUE	non_canonical	0	0	junction_8	173.066461222271	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGAAAGTAATGCTCC	NA	False	NA	-11	True	AATAAA	-25	NA	91859777	91850516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91858792_91859000
ES.33564.18	chr8	-	1784	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	12	-320	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	163.204030451321	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGAAAGTAATGCTCC	NA	False	NA	-11	True	AATAAA	-25	NA	91860639	91850516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856472_91857668_91857781_91860527
ES.33564.2	chr8	-	2029	1	Intergenic	novelGene_27330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTTCAC	NA	False	NA	NA	False	NA	NA	NA	91826429	91824400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91824400_91826400
ES.33564.20	chr8	-	2868	7	NIC	ENSMUSG00000031667.17	novel	1171	10	NA	NA	8	-320	intron_retention	FALSE	canonical	3	139	junction_6	114.669089121698	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGAAAGTAATGCTCC	NA	False	NA	-11	True	AATAAA	-25	NA	91860617	91850516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_91852553_91852652_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
ES.33564.22	chr8	-	1800	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	10	390	10	-320	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGAAAGTAATGCTCC	NA	False	NA	-11	True	AATAAA	-25	NA	91860615	91850516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ES.33564.25	chr8	-	1708	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	6	-322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	132.639956365687	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCAGGAAAGTAATGCT	NA	False	NA	-13	True	AATAAA	-23	NA	91860645	91850518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851307_91851450_91851512_91852444_91852510_91852648_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.26	chr8	-	1769	11	NIC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	8	-325	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	169.907886809294	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATGCAGGAAAGTAAT	NA	False	NA	-16	True	AATAAA	-20	NA	91860617	91850521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858464_91858518_91860527
ES.33564.27	chr8	-	3486	11	NNC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	6	-326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	160.136316930295	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTATGCAGGAAAGTAA	NA	False	NA	-17	True	AATAAA	-19	NA	91860619	91850522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858797_91859004
ES.33564.28	chr8	-	1132	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	50	897	-8	3	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATCAGTGTTGTGT	NA	False	NA	-6	True	AGTAAA	-15	NA	91860605	91851093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.3	chr8	-	2721	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	-1	598	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	118.014228060397	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTCTAAAGATTTGC	NA	False	NA	NA	False	AATACA	-25	NA	91860626	91849528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.4	chr8	-	2145	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	7	-73	3	3	multi-exon	TRUE	canonical	3	258	junction_9	63.7020456287233	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTAACTTCCAGGAA	NA	False	NA	0	True	AATAAA	-20	NA	91860648	91850123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ES.33564.6	chr8	-	2200	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	1	-1	1	1	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTTTTAACTTCCAGG	NA	False	NA	-2	True	AATAAA	-18	NA	91860624	91850125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ES.33564.7	chr8	-	2156	10	NIC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	139.134183390187	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATTTTTTTAACTTCC	NA	False	NA	-5	True	AATAAA	-15	NA	91860626	91850128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856472_91857668_91857781_91860527
ES.33565.1	chr8	-	3706	1	Intergenic	novelGene_27331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	91937047	91933341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_91933300_91937000
ES.33566.1	chr8	+	171	1	Intergenic	novelGene_27332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGAAAAAAAATTGGTG	NA	False	NA	NA	False	NA	NA	NA	92036041	92036212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_92036000_92036200
ES.33567.1	chr8	-	6978	26	NNC	ENSMUSG00000033282.15	novel	7009	26	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	5.46260011349907	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGGAAGAGACTTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	92039868	91943663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014358_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ES.33567.10	chr8	-	5128	2	FSM	ENSMUSG00000033282.15_ENSMUSG00000109956.2	ENSMUST00000209564.2	278	2	-2821	-2029	-16	7	multi-exon	FALSE	canonical	3	27	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTGTTTTTATTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	92039866	92032587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_92034815_92036965
ES.33567.11	chr8	-	2363	3	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-33	87013	7	2020	5prime_fragment	FALSE	canonical	3	21	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAATGTAGTGTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	92039883	92032596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_92034815_92036965_92037058_92039830
ES.33567.12	chr8	-	472	3	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-29	88900	11	133	5prime_fragment	FALSE	canonical	3	21	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTCTAAAGTTGCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	92039879	92034483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_92034815_92036965_92037058_92039830
ES.33567.2	chr8	-	6756	26	FSM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	-118	371	-118	-371	multi-exon	FALSE	canonical	2	7	junction_9	4.90126514279732	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTTCCTGCCATTC	NA	False	NA	NA	False	AATAAA	-43	NA	92040008	91944028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ES.33567.3	chr8	-	6085	21	NIC	ENSMUSG00000033282.15	novel	7009	26	NA	NA	5471	-376	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	5.06853035898967	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATTCTGCTGTTCCTGC	NA	False	NA	NA	False	AATAAA	-38	NA	92031574	91944033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92014213_92014361_92025856_92026001_92027405_92027509_92031346
ES.33567.4	chr8	-	6706	17	ISM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	31161	377	-595	-377	3prime_fragment	FALSE	canonical	2	7	junction_9	3.71599162404869	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAATTCTGCTGTTCCTG	NA	False	NA	NA	False	AATAAA	-37	NA	92008729	91944034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345
ES.33567.6	chr8	-	5126	26	FSM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	-14	1897	-14	29	multi-exon	FALSE	canonical	2	7	junction_9	4.90126514279732	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGACCATTTCATTTAG	NA	False	NA	NA	False	ATTAAA	-45	NA	92039904	91945554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ES.33567.7	chr8	-	4468	26	FSM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	0	2541	0	-615	multi-exon	FALSE	canonical	2	7	junction_9	4.90126514279732	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTGGCACCAACTTA	NA	False	NA	NA	False	ATTAAA	-10	NA	92039890	91946198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ES.33567.8	chr8	-	5832	25	NNC	ENSMUSG00000033282.15	novel	7009	26	NA	NA	18	-3971	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.52016505389306	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92039872	91949554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987520_91987610_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ES.33567.9	chr8	-	1841	4	ISM	ENSMUSG00000033282.15	ENSMUST00000139113.8	5046	26	-16	84494	-16	4539	5prime_fragment	FALSE	canonical	3	16	junction_1	4.49691252107735	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCATCCTGTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	92039866	92030077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_92031646_92034669_92034815_92036965_92037058_92039830
ES.33568.1	chr8	+	3638	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	-76	2	-76	-2	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCGTCCGTGCTTTTCT	NA	False	NA	14	True	AATAAA	-22	NA	92040076	92395065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.10	chr8	+	3487	9	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	138.374435409869	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGAGCGTCCGTGCTT	NA	False	NA	10	True	AATAAA	-18	NA	92040174	92395061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92194944_92195025_92200936_92201081_92211786_92211907_92228353_92228449_92249399_92249525_92392909
ES.33568.11	chr8	+	3417	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	103.39857497143	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCGTCCGTGCTTTTC	NA	False	NA	13	True	AATAAA	-21	NA	92040176	92395064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92249399_92249525_92392909
ES.33568.12	chr8	+	3227	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	24	313	-9	-313	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTCTCTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	92040176	92394754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.13	chr8	+	3542	9	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	98.7620245843513	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCCTAAGAGCGTCCG	NA	False	NA	5	True	AATAAA	-13	NA	92040177	92395056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249385_92249525_92392909
ES.33568.14	chr8	+	1531	8	FSM	ENSMUSG00000055932.16	ENSMUST00000128081.8	4707	8	-8	3184	-8	-3184	multi-exon	FALSE	canonical	3	202	junction_7	44.6025532352358	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTACAGGTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	92040177	92249674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399
ES.33568.15	chr8	+	3395	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	103.379625356138	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTCCGTGCTTTTCTCC	NA	False	NA	16	True	AATAAA	-24	NA	92040177	92395067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92128434_92128513_92135850_92136470_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.16	chr8	+	3452	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-8	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	97.2940000667029	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGAGCGTCCGTG	NA	False	NA	7	True	AATAAA	-15	NA	92040177	92395058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.17	chr8	+	3525	10	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-7	-13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	119.908092376136	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAAGCCTAAGAGCGTC	NA	False	NA	3	True	AATAAA	-11	NA	92040178	92395054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92136526_92136531_92168294_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.18	chr8	+	2911	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-7	-8	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	101.249137058555	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTAAGAGCGTCCGTGC	NA	False	NA	8	True	AATAAA	-16	NA	92040178	92395059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92128434_92128513_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.19	chr8	+	2044	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	28	1492	-5	1	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGCGCATGCTGATGA	NA	False	NA	NA	False	ATTAAA	-17	NA	92040180	92393575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.2	chr8	+	3646	10	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.443596264935	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCGTCCGTGCTTTTC	NA	False	NA	13	True	AATAAA	-21	NA	92040143	92395064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92125435_92125512_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ES.33568.20	chr8	+	3392	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	2	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	105.434765594269	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCCTAAGAGCGTCC	NA	False	NA	4	True	AATAAA	-12	NA	92040187	92395055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92392909
ES.33568.21	chr8	+	5429	1	FSM	ENSMUSG00000110079.2	ENSMUST00000211232.2	2207	1	-2338	-884	-2338	884	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCCATTAGAACTAATAA	NA	False	NA	NA	False	NA	NA	NA	92174595	92180024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92174600_92180000
ES.33568.22	chr8	+	6378	1	FSM	ENSMUSG00000110079.2	ENSMUST00000211232.2	2207	1	-2322	-1849	-2322	1849	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTCTGGGATTAAAGG	NA	False	NA	NA	False	NA	NA	NA	92174611	92180989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92174600_92181000
ES.33568.23	chr8	+	4223	3	Antisense	novelGene_ENSMUSG00000090778.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTCTCCT	NA	False	NA	NA	False	TTTAAA	-41	NA	92345411	92349860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_92345943_92345993_92347796_92347970
ES.33568.24	chr8	+	1667	1	Intergenic	novelGene_27336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	92369138	92370805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_92369100_92370800
ES.33568.3	chr8	+	3664	10	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	120.344669620939	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGAGCGTCCGTGCTT	NA	False	NA	10	True	AATAAA	-18	NA	92040152	92395061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92338248_92338355_92392909
ES.33568.4	chr8	+	992	4	FSM	ENSMUSG00000055932.16	ENSMUST00000125471.8	3887	4	-1	2896	-1	-2896	multi-exon	FALSE	canonical	3	247	junction_3	30.4667396060396	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGATTTTTTTT	NA	False	NA	NA	False	AATACA	-16	NA	92040161	92168498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290
ES.33568.5	chr8	+	3644	10	NNC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	118.783650203029	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCGTCCGTGCTTTTC	NA	False	NA	13	True	AATAAA	-21	NA	92040164	92395064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92228353_92228449_92249399_92249525_92392909
ES.33568.6	chr8	+	3809	7	FSM	ENSMUSG00000055932.16	ENSMUST00000136802.8	3751	7	-31	-27	2	27	multi-exon	FALSE	canonical	3	227	junction_6	36.3994047570378	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	92040164	92214446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786
ES.33568.7	chr8	+	4752	8	FSM	ENSMUSG00000055932.16	ENSMUST00000128081.8	4707	8	-21	-24	2	24	multi-exon	FALSE	canonical	3	202	junction_7	44.6025532352358	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGGCGGGTGTCCATTT	NA	False	NA	NA	False	AATGAA	-35	NA	92040164	92252882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399
ES.33568.8	chr8	+	905	5	NNC	ENSMUSG00000055932.16	novel	3887	4	NA	NA	5	-2896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.750733853078	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGATTTTTTTT	NA	False	NA	NA	False	AATACA	-16	NA	92040167	92168498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_92040249_92128434_92128513_92135850_92135954_92136034_92136470_92168290
ES.33568.9	chr8	+	3396	8	NIC	ENSMUSG00000055932.16	novel	3564	9	NA	NA	5	-9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	99.3082194432041	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGAGCGTCCGTG	NA	False	NA	7	True	AATAAA	-15	NA	92040167	92395058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92211786_92211907_92249399_92249525_92392909
ES.33569.1	chr8	-	4975	1	Intergenic	novelGene_27333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAGTAGATATTCTTA	9992	False	NA	NA	False	NA	NA	NA	92049701	92044726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_92044700_92049700
ES.3357.1	chr10	-	948	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1879.46469920442	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTGTAACTTTGATC	NA	False	NA	-9	True	AATAAA	-29	NA	80691036	80688654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80689418_80689591_80689664_80690451_80690543_80691014
ES.3357.10	chr10	-	482	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	2086.65489879536	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCCCTTCCTGCTC	NA	False	NA	-22	True	AATAAA	-16	NA	80691048	80688667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80688935_80689591_80689664_80690451_80690561_80691014
ES.3357.11	chr10	-	1110	3	FSM	ENSMUSG00000035215.10	ENSMUST00000220225.2	1129	3	6	13	6	-1	multi-exon	FALSE	canonical	3	2872	junction_2	840	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCCCTTCCTGCTC	NA	False	NA	-22	True	AATAAA	-16	NA	80691037	80688667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80689664_80690451_80690543_80691014
ES.3357.13	chr10	-	452	4	NNC	ENSMUSG00000035215.10	novel	468	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2103.14309757774	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTCCCTCCCTTCCTG	NA	False	NA	-25	True	AATAAA	-13	NA	80691050	80688670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80688935_80689591_80689664_80690451_80690543_80691025
ES.3357.2	chr10	-	505	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	-33	-4	-33	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTGTAACTTTGATC	NA	False	NA	-9	True	AATAAA	-29	NA	80691076	80688654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ES.3357.5	chr10	-	1594	2	FSM	ENSMUSG00000035215.10	ENSMUST00000218931.2	785	2	-12	-797	4	1	multi-exon	FALSE	canonical	3	4552	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTCTGTAACTTTG	NA	False	NA	-12	True	AATAAA	-26	NA	80691039	80688657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80689664_80690451
ES.3357.7	chr10	-	688	4	NIC	ENSMUSG00000035215.10	novel	609	4	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	2087.59707691776	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTTCCTGCTCTGTAA	NA	False	NA	-17	True	AATAAA	-21	NA	80691026	80688662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80688935_80689591_80689664_80690451_80690543_80690773
ES.3357.8	chr10	-	602	4	FSM	ENSMUSG00000035215.10	ENSMUST00000220406.2	550	4	-53	1	-3	-1	multi-exon	FALSE	canonical	3	42	junction_3	2083.35727986237	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCCCTTCCTGCTC	NA	False	NA	-22	True	AATAAA	-16	NA	80691030	80688667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80690858
ES.3357.9	chr10	-	383	3	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	1432	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCCTCCCTTCCTGCTC	NA	False	NA	-22	True	AATAAA	-16	NA	80691039	80688667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80688935_80690451_80690543_80691014
ES.33570.1	chr8	-	3532	1	Intergenic	novelGene_27334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	92093424	92089892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_92089900_92093400
ES.33571.1	chr8	-	3560	1	Intergenic	novelGene_27335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATACTGGCCATGGCA	NA	False	NA	NA	False	NA	NA	NA	92134993	92131433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_92131400_92135000
ES.33572.1	chr8	-	11488	3	Antisense	novelGene_ENSMUSG00000055932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACTGATAACAGCTGA	NA	False	NA	NA	False	NA	NA	NA	92166336	92151294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_92155801_92155928_92157706_92161131
ES.33572.2	chr8	-	5741	2	Antisense	novelGene_ENSMUSG00000055932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCTGCCCTGATGAGA	NA	False	NA	NA	False	AATAAA	-27	NA	92166357	92157190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_92157706_92161131
ES.33573.1	chr8	-	1216	3	Antisense	novelGene_ENSMUSG00000055932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATATTTTCTTGAACT	NA	False	NA	NA	False	AATAAA	-14	NA	92327967	92325578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_92326535_92326924_92326999_92327781
ES.33574.1	chr8	-	2637	4	FSM	ENSMUSG00000031734.14	ENSMUST00000175795.4	2748	4	109	2	-43	-2	multi-exon	FALSE	canonical	2	5	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGCAGGTCTGCCACAT	NA	False	NA	NA	False	AATAAA	-25	NA	92528586	92525154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_92525605_92526038_92526106_92526300_92527427_92527592
ES.33575.1	chr8	-	1944	1	Intergenic	novelGene_27337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATGTGTCTCCTTATCT	NA	False	NA	NA	False	AATAAA	-16	NA	92755040	92753096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_92753100_92755000
ES.33576.1	chr8	-	135	1	Intergenic	novelGene_27338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAAAGGTGCCATTTGT	NA	False	NA	NA	False	AATAAA	-9	NA	92828738	92828603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_92828600_92828700
ES.33577.1	chr8	+	3100	1	Intergenic	novelGene_27339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	93079057	93082157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_93079100_93082200
ES.33578.1	chr8	-	5124	5	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	11	0	intron_retention	FALSE	canonical	3	9	junction_4	2.54950975679639	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	False	NA	NA	False	AATAAA	-21	NA	93082737	93052660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93077383_93082315
ES.33578.2	chr8	-	5231	4	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	9	junction_3	2.86744175568088	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTGTTTGTGTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	93082525	93052661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_93053091_93071480_93071668_93072977_93077383_93082315
ES.33578.3	chr8	-	495	3	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACATGTTTGTTTGTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	93082504	93052664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_93052895_93053014_93053091_93082315
ES.33578.4	chr8	-	1378	6	NIC	ENSMUSG00000031736.12	novel	1238	7	NA	NA	-19	1	intron_retention	FALSE	canonical	0	0	junction_4	5.31413210223457	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACATGTTTGTTTGTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	93082767	93052664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
ES.33578.5	chr8	-	2822	4	ISM	ENSMUSG00000031736.12	ENSMUST00000180102.8	732	6	8587	-1966	-307	1966	3prime_fragment	FALSE	canonical	1	2	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTAAAAAGTATTTTAT	6164	False	NA	NA	False	AATACA	-12	NA	93073805	93060872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_93063000_93071480_93071668_93072977_93073092_93073411
ES.33578.6	chr8	-	6171	5	NIC	ENSMUSG00000031736.12	novel	732	6	NA	NA	-22	1512	intron_retention	FALSE	canonical	1	2	junction_1	3.90512483795333	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTCACCTCTCGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	93082541	93061326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_93063000_93071480_93071668_93072977_93073092_93073411_93077383_93082315
ES.33579.1	chr8	+	238	1	Intergenic	novelGene_27340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAATTAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	93496144	93496382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_93496100_93496400
ES.3358.1	chr10	+	3240	13	NNC	ENSMUSG00000059406.9	novel	3581	19	NA	NA	-50	3077	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.276385399196283	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGAGTTATTTTGTT	4926	False	NA	NA	False	NA	NA	NA	80707631	80729621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80707717_80715618_80715798_80718468_80718601_80719552_80719621_80719776_80719953_80720981_80721024_80721899_80722014_80723217_80723390_80724119_80724395_80725163_80725301_80726011_80726331_80727990_80728378_80728467
ES.3358.2	chr10	+	1907	9	NNC	ENSMUSG00000059406.9	novel	1904	10	NA	NA	-1571	-1703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGCAGCGGGTGGCAAA	1193	False	NA	NA	False	NA	NA	NA	80713967	80724841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80714274_80715618_80715798_80718468_80718597_80719552_80719621_80719776_80719953_80720981_80721024_80721899_80722014_80723217_80723390_80724119
ES.33580.1	chr8	+	175	1	Intergenic	novelGene_27341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGTATG	NA	False	NA	NA	False	NA	NA	NA	93516714	93516889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_93516700_93516900
ES.33581.1	chr8	+	3089	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	-8	-3	-8	3	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTCTGTTTTAGCAGT	NA	False	NA	7	True	AATAAA	-22	NA	93553910	93580051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ES.33581.2	chr8	+	2903	13	NNC	ENSMUSG00000031740.9	novel	3078	13	NA	NA	112	0	intron_retention	FALSE	canonical	0	0	junction_5	8.30996724154527	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGGCTCTGTTTTAG	NA	False	NA	3	True	AATAAA	-18	NA	93554030	93580047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562658_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ES.33581.3	chr8	+	2287	14	NIC	ENSMUSG00000031740.9	novel	3078	13	NA	NA	327	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	7.63129650783748	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTGGCTCTGTTTT	NA	False	NA	1	True	AATAAA	-16	NA	93554245	93580045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189_93579342_93579802
ES.33582.1	chr8	+	927	6	ISM	ENSMUSG00000033192.6	ENSMUST00000209265.2	2238	13	-55	43158	1	5607	5prime_fragment	FALSE	canonical	1	1	junction_4	2.8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAAATCTTCAATCA	NA	False	NA	NA	False	AATAGA	-16	NA	93581967	93602293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93600860_93600920_93602182
ES.33582.2	chr8	+	2020	14	FSM	ENSMUSG00000033192.6	ENSMUST00000046290.3	2811	14	11	780	11	-324	multi-exon	TRUE	canonical	2	3	junction_10	2.47591952914324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCCACTGGTCAGCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	93581977	93645127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
ES.33582.3	chr8	+	1955	13	FSM	ENSMUSG00000033192.6	ENSMUST00000209265.2	2238	13	-41	324	15	-324	multi-exon	FALSE	canonical	1	1	junction_4	2.59673940848048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCCACTGGTCAGCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	93581981	93645127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93641007_93644662
ES.33583.1	chr8	-	7995	4	NNC	ENSMUSG00000110670.2	novel	1110	4	NA	NA	-26813	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACTTGGGCAGCCTGTT	NA	False	NA	NA	False	AATGAA	-23	NA	94181069	94142525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94150064_94150168_94150242_94152733_94152830_94180781
ES.33583.2	chr8	-	3277	2	Intergenic	novelGene_27342	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTCTCTGTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	94181099	94170196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_94173156_94180781
ES.33584.1	chr8	+	3895	8	FSM	ENSMUSG00000031748.17	ENSMUST00000125716.8	3462	8	-362	-71	-158	71	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAATGTAGTGTTTACA	3997	False	NA	NA	False	ATTAAA	-3	NA	94537105	94695655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94690011_94690166_94693495
ES.33584.2	chr8	+	3292	9	FSM	ENSMUSG00000031748.17	ENSMUST00000034198.15	2948	9	-346	2	-144	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTCTCACCTTCTGC	4011	False	NA	6	True	AATAAA	-16	NA	94537119	94696014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94690011_94690166_94693495_94693712_94694659
ES.33585.1	chr8	+	1628	7	Antisense	novelGene_ENSMUSG00000031751.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94699867	94712316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_94699942_94700685_94700872_94701363_94701448_94702661_94702796_94706945_94707049_94709938_94710131_94711461
ES.33586.1	chr8	+	186	1	Intergenic	novelGene_27344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCCTACAGCC	NA	False	NA	NA	False	NA	NA	NA	94733223	94733409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_94733200_94733400
ES.33587.1	chr8	+	213	1	Intergenic	novelGene_27345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCATTTGGGAGGC	2872	False	NA	NA	False	NA	NA	NA	94753324	94753537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_94753300_94753500
ES.33588.1	chr8	+	2902	4	NNC	ENSMUSG00000033009.16	novel	718	7	NA	NA	-423	4320	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	78.7245549721023	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTGCCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	94763402	94770400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765592_94765739_94766624_94766676_94768363
ES.33588.10	chr8	+	2617	2	FSM	ENSMUSG00000033009.16	ENSMUST00000141636.2	671	2	-31	-1915	-9	1915	multi-exon	FALSE	canonical	3	171	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	94763856	94767995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94764071_94765592
ES.33588.11	chr8	+	4242	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-7	-889	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	45.1189428983488	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGTATTTTTAACGTG	NA	False	NA	NA	False	AATAAA	-30	NA	94763858	94793660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94764071_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.12	chr8	+	3196	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	42	2072	2	-2072	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTAGTAGATACTTACA	NA	False	NA	NA	False	AGTAAA	-18	NA	94763867	94792477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.13	chr8	+	2061	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	7	-3253	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	57.3591405611796	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTTCGTTCTGTAGT	NA	False	NA	11	True	NA	NA	NA	94763872	94791296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765592_94765739_94766624_94766676_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.14	chr8	+	3758	3	ISM	ENSMUSG00000033009.16	ENSMUST00000172674.2	718	7	-41	5416	-5	-5416	5prime_fragment	FALSE	canonical	3	129	junction_2	21	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94763882	94777323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94764071_94765592_94765739_94773899
ES.33588.15	chr8	+	5290	13	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.6567259677386	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTATGGTGGTAATTTA	NA	False	NA	5	True	AATAAA	-15	NA	94763890	94794547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765545_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.16	chr8	+	5490	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	5	-4	intron_retention	FALSE	canonical	3	129	junction_2	13.2963674900234	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTATGGTGGTAATT	NA	False	NA	3	True	AATAAA	-13	NA	94763895	94794545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.17	chr8	+	4486	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	6	-902	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	56.8355876513003	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTATTGAAGATGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	94763896	94793647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765592_94765739_94766526_94766676_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.18	chr8	+	4581	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	12	-906	intron_retention	FALSE	canonical	3	129	junction_2	13.2963674900234	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAAGGCTATTGAAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	94763902	94793643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.2	chr8	+	2040	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	17	3253	17	-3253	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTTCGTTCTGTAGT	NA	False	NA	11	True	NA	NA	NA	94763842	94791296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.20	chr8	+	5135	13	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.7085469084678	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCTATGGTGGTAAT	NA	False	NA	2	True	AATAAA	-12	NA	94763904	94794544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94763980_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.21	chr8	+	5281	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	57.3591405611796	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTATGGTGGTAATTTAT	NA	False	NA	6	True	AATAAA	-16	NA	94763904	94794548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765592_94765739_94766624_94766676_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.22	chr8	+	3405	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-7	-2073	intron_retention	FALSE	canonical	3	129	junction_2	13.2963674900234	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCTAGTAGATACTTAC	NA	False	NA	NA	False	AGTAAA	-17	NA	94763911	94792476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.23	chr8	+	1514	9	ISM	ENSMUSG00000033009.16	ENSMUST00000060632.8	5214	13	17312	3258	-456	-3258	3prime_fragment	FALSE	canonical	3	141	junction_3	12.4096736459909	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAATTCTCTTCGTTCT	57	False	NA	6	True	NA	NA	NA	94781230	94791291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.3	chr8	+	4895	14	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.8854075300987	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCTATGGTGGTAAT	NA	False	NA	2	True	AATAAA	-12	NA	94763842	94794544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806_94791818_94792210
ES.33588.4	chr8	+	4396	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	17	897	17	-897	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGATGGAGTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	94763842	94793652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.5	chr8	+	3818	11	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	17	-3251	intron_retention	FALSE	canonical	3	129	junction_1	12.8202964084299	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCGTTCTGTAGTAA	NA	False	NA	13	True	NA	NA	NA	94763842	94791298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.6	chr8	+	5139	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	45.1189428983488	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGGTGGTAATTTATAA	NA	False	NA	8	True	AATAAA	-18	NA	94763851	94794550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94764071_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.7	chr8	+	4141	1	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-11	1915	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	94763854	94767995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94763900_94768000
ES.33588.8	chr8	+	5308	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	30	-28	-10	28	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAAGACCAGTGCCTTT	NA	False	NA	35	True	AATAAA	-45	NA	94763855	94794577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33588.9	chr8	+	4425	13	NNC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	-9	-901	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.6567259677386	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTATTGAAGATGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	94763856	94793648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94764071_94765545_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ES.33589.1	chr8	-	4582	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	217	-919	217	919	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTTTATCTCTCTGTA	NA	False	NA	NA	False	NA	NA	NA	94739253	94697296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.10	chr8	-	3272	14	Fusion	ENSMUSG00000031751.15_ENSMUSG00000031754.11	novel	3880	14	NA	NA	-7	-221	multi-exon	FALSE	canonical	0	0	junction_13	68.3400824107297	731	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGTGTGGTGTGGGG	NA	False	NA	-12	True	AATAAA	-11	NA	94763641	94698436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94763404
ES.33589.11	chr8	-	3554	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	-2	328	-2	-328	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTAGTTAAATTCCT	NA	False	NA	-36	True	AATAAA	-24	NA	94739472	94698543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.12	chr8	-	6235	13	NIC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	207	-328	intron_retention	FALSE	canonical	3	217	junction_1	16.4086274732397	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTAGTTAAATTCCT	NA	False	NA	-36	True	AATAAA	-24	NA	94739263	94698543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.13	chr8	-	3203	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	232	-332	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	65.2280478387332	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGCTGTTAGTTAAAT	NA	False	NA	-40	True	AATAAA	-20	NA	94739238	94698547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738959
ES.33589.14	chr8	-	5408	13	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	259	-333	intron_retention	FALSE	non_canonical	0	0	junction_7	71.1107801641604	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTGCTGTTAGTTAAA	NA	False	NA	-41	True	AATAAA	-19	NA	94739211	94698548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94713702_94713876_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.15	chr8	-	3421	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	222	-333	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	67.0212365884587	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTGCTGTTAGTTAAA	NA	False	NA	-41	True	AATAAA	-19	NA	94739248	94698548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711669_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.16	chr8	-	3277	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	216	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.006961008136	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGAACTGCTGTTAGTT	NA	False	NA	-44	True	AATAAA	-16	NA	94739254	94698551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710080_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.17	chr8	-	6581	12	NIC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	246	-337	intron_retention	FALSE	canonical	3	217	junction_1	15.2092838111986	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGAACTGCTGTTAGT	NA	False	NA	-45	True	AATAAA	-15	NA	94739224	94698552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94710131_94711461_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.18	chr8	-	3323	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	190	-337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.9771977083788	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGAACTGCTGTTAGT	NA	False	NA	-45	True	AATAAA	-15	NA	94739280	94698552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702767_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.2	chr8	-	3838	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	43	-1	43	1	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCCATTTCAGATGT	NA	False	NA	-4	True	AATAAA	-18	NA	94739427	94698214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.20	chr8	-	2514	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	-2	1368	-2	2	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATGGCCTCTTCTGGTG	NA	False	NA	NA	False	NA	NA	NA	94739472	94699583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.21	chr8	-	2366	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	241	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	67.0212365884587	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCATGGCCTCTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	94739229	94699584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711669_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.22	chr8	-	172	1	Intergenic	novelGene_27343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTTATAAAT	7688	False	NA	NA	False	NA	NA	NA	94703723	94703551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_94703600_94703700
ES.33589.23	chr8	-	1348	8	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	255	13097	255	-11727	5prime_fragment	FALSE	canonical	3	224	junction_1	15.0590673749765	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGAGCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94739215	94711312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.24	chr8	-	1686	4	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	141	26718	141	909	5prime_fragment	FALSE	canonical	3	236	junction_3	10.3387082795139	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTATTTAAACTGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	94739329	94724933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.25	chr8	-	4999	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	11	0	11	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTGTTTGGGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	94763648	94742123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.26	chr8	-	4441	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTGTTTGGGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	94763669	94742123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743927_94744505_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.27	chr8	-	4291	7	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1048.48929682451	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTAATTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	94763641	94742125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743932_94744515_94746333_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.28	chr8	-	4914	6	NIC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	2	36	junction_2	908.733492284729	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTAATTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	94763641	94742125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94746333_94749402_94749518_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.29	chr8	-	3675	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	12	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTAATTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	94763647	94742125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743922_94745242_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.3	chr8	-	3616	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	94	170	94	-170	multi-exon	FALSE	canonical	3	217	junction_1	15.7862947074897	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGGGTTGGGGTTTATA	NA	False	NA	39	True	NA	NA	NA	94739376	94698385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.30	chr8	-	3669	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTAATTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	94763641	94742125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743929_94745249_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.31	chr8	-	4329	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTAATTGTTTGGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	94763642	94742125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743926_94744587_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.32	chr8	-	4424	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTAATTGTTTGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	94763647	94742126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743933_94744503_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.33	chr8	-	4515	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTAATTGTTTGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	94763641	94742126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743979_94744452_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.34	chr8	-	3673	8	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	818.335194034766	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTAATTGTTTGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	94763636	94742126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743930_94745240_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.35	chr8	-	4543	9	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1126.33210022622	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTAATTGTTTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	94763641	94742127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94743928_94744511_94746333_94749402_94749518_94751169_94751246_94752190_94752330_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.37	chr8	-	2753	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	12	2245	12	1664	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCCAGCTAATCCTTCA	NA	False	NA	NA	False	NA	NA	NA	94763647	94744368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.38	chr8	-	1122	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	-20	3908	-20	1	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGGATCCTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	94763679	94746031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.39	chr8	-	975	6	NIC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	883.060360337842	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGGATCCTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	94763647	94746031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94746333_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.4	chr8	-	5736	13	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	207	-214	intron_retention	TRUE	non_canonical	0	0	junction_3	94.5889866151916	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTGGGGGCAGTGG	NA	False	NA	-5	True	AATAAA	-18	NA	94739263	94698429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701605_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94713702_94713876_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.40	chr8	-	884	6	NIC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	950.453070908817	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGGATCCTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	94763642	94746031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94763404
ES.33589.41	chr8	-	1110	7	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	852.601786038216	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGAGGATCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	94763647	94746033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94746355_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.43	chr8	-	1079	7	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	871.567680804091	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCGAGGATCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	94763645	94746033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94746333_94749402_94749518_94751169_94751246_94755469_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.46	chr8	-	4150	6	NIC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	2190	junction_3	87.1031572332484	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGCCGAGGATCCTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	94763641	94746035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.47	chr8	-	5297	6	NIC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	2190	junction_3	130.2403931198	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGCCGAGGATCCTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	94763641	94746035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94746333_94749402_94749518_94751169_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.48	chr8	-	3821	7	NNC	ENSMUSG00000031754.11	novel	5010	7	NA	NA	2	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	852.601786038216	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTTTTAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	94763632	94746079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94748152_94748427_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.49	chr8	-	968	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	12	4030	12	-78	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGTGGCAGTGTTCAT	NA	False	NA	NA	False	AGTAAA	-26	NA	94763647	94746153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ES.33589.5	chr8	-	3378	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	236	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	68.006961008136	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTGTGGGGGCAGTG	NA	False	NA	-6	True	AATAAA	-17	NA	94739234	94698430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710080_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.6	chr8	-	3318	15	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	222	-215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.8683365138519	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGTGTGGGGGCAGTG	NA	False	NA	-6	True	AATAAA	-17	NA	94739248	94698430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699589_94699713_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.33589.7	chr8	-	3329	14	NNC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	222	-216	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	65.2280478387332	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGTGTGGGGGCAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94739248	94698431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738959
ES.33589.8	chr8	-	3104	12	NIC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	242	-216	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	71.5818897637437	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGTGTGGGGGCAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94739228	94698431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94731760_94731854_94738846
ES.33589.9	chr8	-	3853	13	NIC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	205	-216	intron_retention	FALSE	canonical	3	217	junction_1	14.6370439486788	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGTGTGGGGGCAGT	NA	False	NA	-7	True	AATAAA	-16	NA	94739265	94698431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ES.3359.1	chr10	-	1047	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	179	-1	-5	1	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCATCGGACTCCCAT	5627	False	NA	NA	False	AATATA	-14	NA	80736624	80735282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736094_80736315_80736385_80736457
ES.3359.10	chr10	-	678	3	FSM	ENSMUSG00000020219.8	ENSMUST00000218481.2	471	3	-27	-180	-26	-8	multi-exon	FALSE	canonical	3	71	junction_1	1786	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCGTGTCACCTCA	5606	False	NA	-15	True	AATAAA	-17	NA	80736645	80735745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736167_80736315_80736385_80736457
ES.3359.2	chr10	-	895	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	130	200	-54	-200	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGGGTGGGTTAAGTG	5578	False	NA	15	True	NA	NA	NA	80736673	80735483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736094_80736315_80736385_80736457
ES.3359.3	chr10	-	875	3	NIC	ENSMUSG00000020219.8	novel	542	3	NA	NA	-23	-217	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	99	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTGCCCAGCACT	5609	False	NA	-2	True	NA	NA	NA	80736642	80735500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80736167_80736315_80736385_80736502
ES.3359.4	chr10	-	887	3	FSM	ENSMUSG00000020219.8	ENSMUST00000218481.2	471	3	9	-425	7	-217	multi-exon	FALSE	canonical	3	71	junction_1	1786	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGTCTGCCCAGCACT	5642	False	NA	-2	True	NA	NA	NA	80736609	80735500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736167_80736315_80736385_80736457
ES.3359.5	chr10	-	690	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	87	448	87	6	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACTGCTTCAGGTCCC	5535	False	NA	-1	True	AATAAA	-31	NA	80736716	80735731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736094_80736315_80736385_80736457
ES.3359.8	chr10	-	540	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	-6	8	-6	-8	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCGTGTCACCTCA	5626	False	NA	-15	True	AATAAA	-17	NA	80736625	80735745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80736094_80736315_80736385_80736502
ES.3359.9	chr10	-	441	1	NIC	ENSMUSG00000020219.8	novel	1225	3	NA	NA	430	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCGTGTCACCTCA	6065	False	NA	-15	True	AATAAA	-17	NA	80736186	80735745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80735700_80736200
ES.33590.1	chr8	-	3810	1	Intergenic	novelGene_27346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	94772143	94768333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_94768300_94772100
ES.33591.1	chr8	+	180	2	Antisense	novelGene_ENSMUSG00000110588.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2050	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94804237	94924342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_94804319_94924243
ES.33591.10	chr8	+	666	2	FSM	ENSMUSG00000031765.9	ENSMUST00000212291.2	633	2	-35	2	-35	0	multi-exon	FALSE	canonical	3	14831	junction_1	0	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94905803	94906953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94905967_94906450
ES.33591.12	chr8	+	382	3	NNC	ENSMUSG00000031765.9	novel	549	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7415.5	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94905868	94906953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94905967_94906450_94906517_94906735
ES.33591.13	chr8	+	1084	1	FSM	ENSMUSG00000031765.9	ENSMUST00000211807.2	1085	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1034	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGGTTTTCTTGGTG	NA	False	NA	26	True	AATAAA	-15	NA	94905868	94906952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94905900_94907000
ES.33591.14	chr8	+	353	3	NNC	ENSMUSG00000031765.9	novel	549	3	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7341	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94906139	94906953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94906203_94906450_94906517_94906729
ES.33591.15	chr8	+	421	3	NNC	ENSMUSG00000031765.9	novel	549	3	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	7292.5	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94906139	94906953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94906271_94906450_94906517_94906729
ES.33591.16	chr8	+	401	2	ISM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	630	2	471	0	3prime_fragment	FALSE	canonical	3	14682	junction_1	0	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94906339	94906953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94906517_94906729
ES.33591.17	chr8	+	178	1	Intergenic	novelGene_27350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	467	False	NA	NA	False	NA	NA	NA	94924164	94924342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_94924200_94924300
ES.33591.18	chr8	+	368	1	Intergenic	novelGene_27351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATATTTAAA	468	False	NA	NA	False	NA	NA	NA	94924165	94924533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_94924200_94924500
ES.33591.2	chr8	+	182	1	Intergenic	novelGene_27347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATTCAG	NA	False	NA	NA	False	NA	NA	NA	94804237	94804419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_94804200_94804400
ES.33591.3	chr8	+	297	2	ISM	ENSMUSG00000031760.10	ENSMUST00000034211.10	536	3	438	-5	299	5	3prime_fragment	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGTCTCTTTTTCAA	NA	False	NA	12	True	AATAAA	-22	NA	94879672	94880779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94879719_94880528
ES.33591.4	chr8	+	669	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	-157	-1	-157	1	multi-exon	FALSE	canonical	3	13494	junction_2	132	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCTGTGCATTGGTT	NA	False	NA	38	True	AATAAA	-24	NA	94899134	94900197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94899504_94899754_94899821_94899963
ES.33591.5	chr8	+	892	1	NIC	ENSMUSG00000031762.8	novel	511	3	NA	NA	12	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	940	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCTGTGCATTGG	NA	False	NA	36	True	AATAAA	-22	NA	94899303	94900195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94899300_94900200
ES.33591.6	chr8	+	636	2	NIC	ENSMUSG00000031762.8	novel	388	3	NA	NA	-76	-2	intron_retention	FALSE	canonical	3	13494	junction_1	0	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGCTTGTCTCTGTGC	NA	False	NA	31	True	AATAAA	-17	NA	94899411	94900190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94899821_94899963
ES.33591.8	chr8	+	362	3	FSM	ENSMUSG00000031762.8	ENSMUST00000212806.2	388	3	24	2	24	-2	multi-exon	TRUE	canonical	3	461	junction_1	6516.5	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGCTTGTCTCTGTGC	NA	False	NA	31	True	AATAAA	-17	NA	94899511	94900190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94899581_94899754_94899821_94899963
ES.33591.9	chr8	+	612	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	-37	-26	-37	26	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACTGGGGTGACT	NA	False	NA	55	True	AATAAA	-44	NA	94905672	94906981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94905967_94906450_94906517_94906729
ES.33592.1	chr8	-	2676	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	390	-2	390	2	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTTTATAAATTAC	NA	False	NA	-1	True	AATAAA	-17	NA	94825166	94794579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
ES.33592.2	chr8	-	4123	16	NNC	ENSMUSG00000031755.7	novel	3064	17	NA	NA	408	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	10.1945519219281	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTTGTTGTTTATAA	NA	False	NA	-6	True	AATAAA	-12	NA	94825148	94794584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94805227_94805327_94806110_94807568_94807652_94807798_94808625_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819024_94819251_94824863
ES.33592.3	chr8	-	2381	16	NIC	ENSMUSG00000031755.7	novel	3064	17	NA	NA	452	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	7.55836549056004	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTTGTTGTTTATAA	NA	False	NA	-6	True	AATAAA	-12	NA	94825104	94794584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94824863
ES.33593.1	chr8	-	1701	1	Antisense	novelGene_ENSMUSG00000031765.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAGATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94906004	94904303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_94904300_94906000
ES.33594.1	chr8	-	209	1	Intergenic	novelGene_27348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATCAGAATGAAGTCAT	6224	False	NA	NA	False	NA	NA	NA	94911824	94911615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_94911600_94911800
ES.33595.1	chr8	-	165	1	Intergenic	novelGene_27349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAGTAAACAAACAAA	5777	False	NA	NA	False	NA	NA	NA	94912271	94912106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_94912100_94912300
ES.33596.1	chr8	+	2818	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	-111	0	-111	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941080	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.10	chr8	+	5025	22	NIC	ENSMUSG00000032939.15	novel	2928	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	35	junction_1	335.434635298478	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941203	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.11	chr8	+	2631	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	255.918620143307	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTAAACATTCTTT	NA	False	NA	14	True	AATAAA	-15	NA	94941205	95041476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041262
ES.33596.15	chr8	+	2910	24	NNC	ENSMUSG00000032939.15	novel	2928	23	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	391.009449264322	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941208	95041484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94941620_94941670_94947064_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.17	chr8	+	3401	20	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	4	-4	intron_retention	FALSE	canonical	3	950	junction_1	73.4785852685991	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941208	95041484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.18	chr8	+	8285	19	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	950	junction_1	73.9074538080907	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941208	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ES.33596.19	chr8	+	5652	22	ISM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-20	219	4	-13	intron_retention	FALSE	canonical	3	35	junction_1	333.690400591195	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTTAAACATTCTT	NA	False	NA	13	True	AATAAA	-14	NA	94941208	95041475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ES.33596.20	chr8	+	2299	18	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	382.030678671709	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941209	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954423_95013102_95013246_95023071_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.21	chr8	+	4967	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	950	junction_1	72.314867074482	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941209	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.22	chr8	+	3080	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	5	-3	intron_retention	FALSE	canonical	3	950	junction_1	72.417038740893	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941209	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.23	chr8	+	2359	20	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	268.685689979947	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941209	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954324_95013102_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.25	chr8	+	2031	16	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.124827157864	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941210	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941274_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.26	chr8	+	2628	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	257.459258604677	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941210	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035588_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.27	chr8	+	6072	18	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-3	intron_retention	FALSE	canonical	3	950	junction_1	77.400008046994	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941210	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.29	chr8	+	2623	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	256.233320899584	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941210	95041484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954423_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.3	chr8	+	2767	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	-48	209	-11	-3	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941180	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.30	chr8	+	3330	22	NIC	ENSMUSG00000032939.15	novel	2928	23	NA	NA	6	-3	intron_retention	FALSE	canonical	3	35	junction_1	335.566539592867	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941210	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.31	chr8	+	2457	20	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	268.685689979947	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941210	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954423_95013102_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.32	chr8	+	4956	19	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	0	intron_retention	FALSE	canonical	1	5	junction_7	268.934844557718	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941210	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023117_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95036334_95036926_95038290_95041212
ES.33596.33	chr8	+	2676	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.643032748803	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941211	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954476_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.34	chr8	+	2667	22	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	257.049806797444	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941213	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036944_95037011_95038160_95038290_95041212
ES.33596.35	chr8	+	3273	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	11	-3	intron_retention	FALSE	canonical	3	950	junction_1	72.0243708754197	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941215	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.36	chr8	+	3835	20	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	950	junction_1	59.0070186914035	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACATTCTTTTTCCTTT	NA	False	NA	21	True	AATAAA	-22	NA	94941216	95041483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95037011_95038160_95038290_95041212
ES.33596.38	chr8	+	2614	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	262.309259272333	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941218	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.39	chr8	+	5588	21	ISM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	30	12	-7	-12	intron_retention	FALSE	canonical	3	950	junction_1	70.3328514991394	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTAAACATTCTTT	NA	False	NA	14	True	AATAAA	-15	NA	94941221	95041476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ES.33596.4	chr8	+	6034	20	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-10	0	intron_retention	FALSE	canonical	3	950	junction_1	72.044999788048	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941181	95041488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ES.33596.40	chr8	+	5554	21	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-6	-5	intron_retention	FALSE	canonical	1	5	junction_7	260.677746461028	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACATTCTTTTTCCTTT	NA	False	NA	21	True	AATAAA	-22	NA	94941222	95041483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023117_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ES.33596.42	chr8	+	4985	19	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	2	-4	intron_retention	FALSE	canonical	3	950	junction_1	75.8181099900884	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941235	95041484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.43	chr8	+	594	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	108	-60	108	60	mono-exon	FALSE	NA	NA	NA	NA	NA	793	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGTTCACTTAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	94949728	94950322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94949700_94950300
ES.33596.44	chr8	+	2638	21	FSM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	0	209	0	-3	multi-exon	FALSE	canonical	3	1090	junction_4	53.8961037552809	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94954288	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.45	chr8	+	2930	15	NIC	ENSMUSG00000032939.15	novel	2847	21	NA	NA	-1464	-3	intron_retention	FALSE	canonical	3	1115	junction_5	58.2119631438524	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	247	False	NA	23	True	AATAAA	-24	NA	95021170	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.6	chr8	+	3104	20	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_13	358.074266117242	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	94941189	95041485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023117_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95036334_95036926_95037011_95038160_95038290_95041212
ES.33596.7	chr8	+	2538	20	NNC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	270.183214743414	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACATTCTTTTTCCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	94941197	95041484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95023071_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ES.33597.1	chr8	+	1961	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	-13	4	-13	-4	multi-exon	FALSE	canonical	3	396	junction_6	55.7864002152818	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCAAGCTTGCTGT	NA	False	NA	43	True	AATAAA	-36	NA	95113052	95122001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.10	chr8	+	2978	5	NIC	ENSMUSG00000031770.17	novel	1873	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	10	junction_4	215.614238861908	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACTCCCATTGTCC	NA	False	NA	28	True	AATAAA	-21	NA	95113123	95121986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95113367_95115983_95117477_95118359_95118483_95118801_95119153_95121218
ES.33597.11	chr8	+	4584	6	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	396	junction_4	63.7024332345319	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCCATTGTCCTGGCA	NA	False	NA	33	True	AATAAA	-26	NA	95113123	95121991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.12	chr8	+	1868	8	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	166.400058869691	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTCCTGGCAAGCT	NA	False	NA	37	True	AATAAA	-30	NA	95113123	95121995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117361_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.13	chr8	+	3834	6	ISM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	58	20	1	-1	intron_retention	FALSE	canonical	3	438	junction_2	35.7513636103576	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGAGACTCCCATTGTC	NA	False	NA	27	True	AATAAA	-20	NA	95113123	95121985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801
ES.33597.14	chr8	+	2038	6	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	244.848034503036	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGAGACTCCCATTGTC	NA	False	NA	27	True	AATAAA	-20	NA	95113124	95121985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95113319_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95119153_95121218
ES.33597.15	chr8	+	2101	7	ISM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	2439	29	1278	-10	3prime_fragment	FALSE	canonical	3	396	junction_5	59.6797006248077	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACTGTAGCAGAGACT	2059	False	NA	18	True	AATAAA	-11	NA	95115504	95121976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.4	chr8	+	1885	8	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	170.492324323006	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTCCTGGCAAGCT	NA	False	NA	37	True	AATAAA	-30	NA	95113093	95121995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118388_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.5	chr8	+	1826	8	NNC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.835535839652	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGAGACTCCCATTGTC	NA	False	NA	27	True	AATAAA	-20	NA	95113123	95121985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95113319_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33597.6	chr8	+	1743	7	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	176.685848015309	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGTAGCAGAGACTC	NA	False	NA	19	True	AATAAA	-12	NA	95113123	95121977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118801_95119153_95120423_95120530_95121218
ES.33597.7	chr8	+	2201	7	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	396	junction_5	57.0684287111145	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCATTGTCCTGGCAAG	NA	False	NA	35	True	AATAAA	-28	NA	95113123	95121993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95119153_95120423_95120530_95121218
ES.33597.8	chr8	+	1847	6	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	-9	intron_retention	FALSE	canonical	3	10	junction_5	203.319846547257	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGTAGCAGAGACTC	NA	False	NA	19	True	AATAAA	-12	NA	95113123	95121977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95113367_95115983_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95121218
ES.33597.9	chr8	+	2992	7	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	1	-5	intron_retention	FALSE	canonical	3	396	junction_5	50.9771190502824	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAGCAGAGACTCCCAT	NA	False	NA	23	True	AATAAA	-16	NA	95113123	95121981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95113367_95115983_95116062_95116148_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ES.33598.1	chr8	-	3924	1	Antisense	novelGene_ENSMUSG00000031770.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-36	NA	95118746	95114822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_95114800_95118700
ES.33599.1	chr8	+	179	1	Intergenic	novelGene_27352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	95205059	95205238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_95205100_95205200
ES.336.1	chr1	-	4548	1	Antisense	novelGene_ENSMUSG00000026083.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTTACCTTCTAAGA	NA	False	NA	NA	False	NA	NA	NA	38082622	38078074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_38078100_38082600
ES.3360.1	chr10	+	5512	1	Antisense	novelGene_ENSMUSG00000062075.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAGCAAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	80743855	80749367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80743900_80749400
ES.33600.1	chr8	+	3204	24	NIC	ENSMUSG00000074151.14	novel	6945	49	NA	NA	-19215	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	1.29562299354359	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTAGCTGGTATCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	95228843	95253896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95228931_95231008_95231093_95231733_95231824_95232089_95232156_95233123_95233208_95233294_95233379_95237071_95237159_95237842_95237924_95238879_95238964_95239181_95239275_95242228_95242313_95242850_95242935_95245822_95245907_95247643_95247728_95247837_95247922_95248030_95248115_95248347_95248432_95248544_95248623_95249296_95249381_95249462_95249535_95249776_95249861_95251610_95251695_95252047_95252132_95252606
ES.33600.2	chr8	+	3287	25	ISM	ENSMUSG00000074151.14	ENSMUST00000053085.12	6945	49	29454	4	-19214	0	3prime_fragment	FALSE	canonical	0	0	junction_6	1.26861144563653	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTAGCTGGTATCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	95228844	95253896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95228931_95231008_95231093_95231733_95231824_95232089_95232156_95233123_95233208_95233294_95233379_95237071_95237159_95237842_95237924_95238879_95238964_95239181_95239275_95242228_95242313_95242850_95242935_95245822_95245907_95247450_95247535_95247643_95247728_95247837_95247922_95248030_95248115_95248347_95248432_95248544_95248623_95249296_95249381_95249462_95249535_95249776_95249861_95251610_95251695_95252047_95252132_95252606
ES.33601.1	chr8	+	2282	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	58	2	9	-2	multi-exon	FALSE	canonical	2	2	junction_4	2.64491125665032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAAGCTCCTTCCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	95259675	95297157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
ES.33602.1	chr8	+	1709	6	Antisense	novelGene_ENSMUSG00000031774.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAGTTCAAGTCTGAC	NA	False	NA	NA	False	NA	NA	NA	95306053	95317118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_95306095_95309513_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938
ES.33602.2	chr8	+	3795	1	Antisense	novelGene_ENSMUSG00000031774.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGATCAAGTTCAAGTC	1678	False	NA	NA	False	NA	NA	NA	95313319	95317114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_95313300_95317100
ES.33602.3	chr8	+	4722	1	Antisense	novelGene_ENSMUSG00000031774.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTAGGGCATTAAAACC	1678	False	NA	NA	False	NA	NA	NA	95313319	95318041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_95313300_95318000
ES.33602.4	chr8	+	2171	4	Antisense	novelGene_ENSMUSG00000031774.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAAGTTCAAGTCTGAC	1678	False	NA	NA	False	NA	NA	NA	95313319	95317118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_95314074_95314630_95314730_95315403_95315542_95315938
ES.33603.1	chr8	-	3721	6	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-5899	1464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	201.356400444585	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAAGACATGCACGCAC	NA	False	NA	NA	False	NA	NA	NA	95315523	95299301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403
ES.33603.10	chr8	-	1795	10	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-5	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	232.320393922055	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3856	False	NA	-7	True	AATAAA	-20	NA	95328359	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309276_95309367_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
ES.33603.11	chr8	-	1671	7	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	1	714	intron_retention	FALSE	non_canonical	0	0	junction_3	218.907451271587	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3890	False	NA	-7	True	AATAAA	-20	NA	95328325	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95328124
ES.33603.13	chr8	-	1618	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-6	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	224.490352503948	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3855	False	NA	-7	True	AATAAA	-20	NA	95328360	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328309
ES.33603.14	chr8	-	1739	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-14	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	219.731654524331	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3929	False	NA	-7	True	AATAAA	-20	NA	95328286	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314620_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.15	chr8	-	1746	9	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	1	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	237.536181454531	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3890	False	NA	-7	True	AATAAA	-20	NA	95328325	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95317800_95317917_95328262
ES.33603.16	chr8	-	1654	8	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	5	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	220.053796762037	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3866	False	NA	-7	True	AATAAA	-20	NA	95328349	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328262
ES.33603.17	chr8	-	1827	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-10	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.200636623258	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3933	False	NA	-7	True	AATAAA	-20	NA	95328282	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95302745_95302848_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.18	chr8	-	1664	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	4	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	223.145600861127	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3947	False	NA	-7	True	AATAAA	-20	NA	95328268	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328171
ES.33603.2	chr8	-	2563	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	1	-10	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTTCTGCCTCTTGT	3890	False	NA	NA	False	NA	NA	NA	95328325	95300775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.20	chr8	-	5183	7	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-2	713	intron_retention	FALSE	non_canonical	0	0	junction_2	182.160795879782	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3893	False	NA	-8	True	AATAAA	-19	NA	95328322	95301571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.21	chr8	-	1905	12	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	5	713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	234.285409047516	237	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3879	False	NA	-8	True	AATAAA	-19	NA	95328336	95301571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315544_95315938_95316036_95317800_95317917_95318282_95318331_95323678_95323737_95328124_95328213_95328309
ES.33603.22	chr8	-	1798	9	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	8	713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	229.797975132506	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3918	False	NA	-8	True	AATAAA	-19	NA	95328297	95301571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313950_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95323678_95323737_95328124
ES.33603.25	chr8	-	1761	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-2	713	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3884	False	NA	-8	True	AATAAA	-19	NA	95328331	95301571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309630_95313950_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.27	chr8	-	1846	11	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	-6	662	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	239.02644205192	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATGTTTTGATTTTG	3855	False	NA	-59	True	NA	NA	NA	95328360	95301622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95318196_95318331_95323678_95323737_95328124_95328213_95328309
ES.33603.29	chr8	-	1593	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	1	547	intron_retention	FALSE	non_canonical	0	0	junction_3	171.915855070118	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGACAGCCCTTGAGCAGA	3898	False	NA	NA	False	AGTAAA	-33	NA	95328317	95301737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.3	chr8	-	1802	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	6	721	intron_retention	FALSE	canonical	0	0	junction_3	171.915855070118	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAGCAAACTTACTGAA	3867	False	NA	0	True	AATAAA	-27	NA	95328348	95301563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309647_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.30	chr8	-	1163	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-7	170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.424036023986	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCGGCTTGATTTCTCT	3854	False	NA	-6	True	NA	NA	NA	95328361	95302114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
ES.33603.31	chr8	-	1088	8	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	0	168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	220.053796762037	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCGGCTTGATTTCT	3886	False	NA	-8	True	NA	NA	NA	95328329	95302116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328262
ES.33603.33	chr8	-	1087	7	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	9	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	218.907451271587	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGGCTCAAACTCGGC	3919	False	NA	-17	True	NA	NA	NA	95328296	95302125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95328124
ES.33603.34	chr8	-	1240	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	8	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	240.056633942909	235	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGGCTCAAACTCGGC	3918	False	NA	-17	True	NA	NA	NA	95328297	95302125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95317861_95317917_95328124
ES.33603.35	chr8	-	3070	5	ISM	ENSMUSG00000031774.9	ENSMUST00000212507.2	897	8	165	5487	1	-1937	intron_retention	FALSE	canonical	3	404	junction_4	40.9229458861407	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATGATGACTTGAATT	3890	False	NA	NA	False	AATAAA	-19	NA	95328325	95311538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ES.33603.4	chr8	-	8586	5	NNC	ENSMUSG00000031774.9	novel	757	6	NA	NA	-4	717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.627934412065	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3939	False	NA	-4	True	AATAAA	-23	NA	95328276	95301567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95328124
ES.33603.5	chr8	-	3318	7	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-8159	717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	185.654398158394	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	NA	False	NA	-4	True	AATAAA	-23	NA	95317783	95301567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938
ES.33603.6	chr8	-	1719	9	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	-18	715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.424036023986	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGTTAGAGAAGCAAACTT	3843	False	NA	-6	True	AATAAA	-21	NA	95328372	95301569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
ES.33603.8	chr8	-	1850	11	NNC	ENSMUSG00000031774.9	novel	828	9	NA	NA	-1	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	237.250690199207	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	3885	False	NA	-7	True	AATAAA	-20	NA	95328330	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95317800_95317917_95323678_95323737_95328124_95328213_95328309
ES.33603.9	chr8	-	1661	8	NNC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	55	714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	224.71560257538	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGTTAGAGAAGCAAACT	4091	False	NA	-7	True	AATAAA	-20	NA	95328124	95301570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95302486_95306027_95306093_95309511_95309641_95313949_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328030
ES.33604.1	chr8	+	3364	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	-22	510	-22	12	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTTGACTCTGTCTTC	8089	False	NA	20	True	AATAAA	-31	NA	95328542	95386393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.10	chr8	+	3660	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	3	189	3	-189	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCCTTCCTGGCTGTAT	8114	False	NA	NA	False	ATTAAA	-20	NA	95328567	95386714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.11	chr8	+	3517	15	NNC	ENSMUSG00000050079.11	novel	3397	15	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.5213098890984	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	8116	False	NA	10	True	AATAAA	-27	NA	95328569	95386905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95328733_95349461_95349964_95355683_95355737_95356383_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.12	chr8	+	3223	1	FSM	ENSMUSG00000050079.11	ENSMUST00000212014.2	3181	1	-23	-19	6	19	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCTATAAAATCTTTT	8117	False	NA	NA	False	NA	NA	NA	95328570	95331793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95328600_95331800
ES.33604.13	chr8	+	3417	14	ISM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	6	4801	6	-1059	5prime_fragment	FALSE	canonical	3	105	junction_1	23.7277457243575	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAGTTTTCCATCTTT	8117	False	NA	NA	False	AATAAA	-13	NA	95328570	95382102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854
ES.33604.14	chr8	+	4027	19	Fusion	ENSMUSG00000050079.11_ENSMUSG00000031776.18	novel	3852	15	NA	NA	12	-2	multi-exon	FALSE	canonical	0	0	junction_14	54.5481155823026	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGATGTGCATTGT	8123	False	NA	10	True	AGTAAA	-23	NA	95328576	95401051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.18	chr8	+	2993	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-114	518	-13	4	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCATGAATTGTTGACT	8126	False	NA	12	True	AATAAA	-23	NA	95328579	95386385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.19	chr8	+	3695	19	Fusion	ENSMUSG00000050079.11_ENSMUSG00000031776.18	novel	3397	15	NA	NA	-12	-4	multi-exon	FALSE	canonical	0	0	junction_14	61.537301745956	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCACTTGATGTGCATT	8127	False	NA	8	True	AGTAAA	-21	NA	95328580	95401049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.2	chr8	+	3972	16	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.378122040451	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	8089	False	NA	10	True	AATAAA	-27	NA	95328542	95386905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95334586_95334683_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.20	chr8	+	3692	16	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-3	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.2576652085848	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCGATCTCCTTCCTGG	8136	False	NA	NA	False	ATTAAA	-14	NA	95328589	95386708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95349461_95349964_95355270_95355331_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.21	chr8	+	3500	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-101	-2	0	2	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	8139	False	NA	10	True	AATAAA	-27	NA	95328592	95386905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.22	chr8	+	3403	16	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.378122040451	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAATTGTTGACTCTGT	8142	False	NA	16	True	AATAAA	-27	NA	95328595	95386389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95334586_95334683_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.23	chr8	+	3820	15	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	47.2092605927511	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8147	False	NA	8	True	AATAAA	-25	NA	95328600	95386903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362129_95363256_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.24	chr8	+	2944	15	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.6048354937079	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCAATCATGAATTGTT	8149	False	NA	8	True	AATAAA	-19	NA	95328602	95386381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95328711_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.25	chr8	+	2791	14	FSM	ENSMUSG00000050079.11	ENSMUST00000212729.2	2800	14	11	-2	-2	2	multi-exon	FALSE	canonical	1	1	junction_1	46.7050419841965	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAATCATGAATTGTTGA	8150	False	NA	10	True	AATAAA	-21	NA	95328603	95386383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95329059_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.28	chr8	+	4457	4	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	45161	2	-5150	-2	3prime_fragment	FALSE	canonical	3	155	junction_1	4.78423336480244	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATTTCACAGCTCTCA	3732	False	NA	6	True	AATAAA	-23	NA	95373854	95386901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.29	chr8	+	1794	1	Intergenic	novelGene_27353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAACAAAAAAACAAA	4005	False	NA	NA	False	NA	NA	NA	95374127	95375921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_95374100_95375900
ES.33604.3	chr8	+	3774	16	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-20	-194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.378122040451	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGATCTCCTTCCTGGC	8091	False	NA	NA	False	ATTAAA	-15	NA	95328544	95386709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95334586_95334683_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.30	chr8	+	1575	1	NIC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	6324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	NA	False	NA	8	True	AATAAA	-25	NA	95385328	95386903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95385300_95386900
ES.33604.31	chr8	+	6811	5	FSM	ENSMUSG00000031776.18	ENSMUST00000212877.2	572	5	-4918	-1321	-4053	0	multi-exon	FALSE	canonical	3	229	junction_4	3.19178633370093	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	12	True	AGTAAA	-25	NA	95389174	95401053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.32	chr8	+	2084	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	4	-25	4	25	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATCTACTGACCTCCG	NA	False	NA	37	True	NA	NA	NA	95393231	95401078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.33	chr8	+	2008	6	NNC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.737583182546	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCACTTGATGTG	NA	False	NA	4	True	AGTAAA	-17	NA	95393251	95401045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95393530_95394224_95394287_95396971_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.34	chr8	+	1502	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	24	537	24	-537	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCGAGTGCGAATGT	NA	False	NA	NA	False	NA	NA	NA	95393251	95400516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.35	chr8	+	901	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	35	1127	35	9	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTCCCCTAGTCCG	NA	False	NA	NA	False	AAAACA	-28	NA	95393262	95399926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ES.33604.36	chr8	+	1901	5	NIC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	-55	-8	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	103.791859025648	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCACTTGATGTG	NA	False	NA	4	True	AGTAAA	-17	NA	95393295	95401045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95393530_95394224_95394287_95396948_95397056_95398689_95398787_95399644
ES.33604.37	chr8	+	2786	5	ISM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	127	8	3	-8	intron_retention	FALSE	canonical	3	233	junction_2	11.5839328382031	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCACTTGATGTG	NA	False	NA	4	True	AGTAAA	-17	NA	95393354	95401045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689
ES.33604.38	chr8	+	1825	7	NNC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	44	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	89.6084073436565	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCACTTGATGTG	NA	False	NA	4	True	AGTAAA	-17	NA	95393395	95401045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644_95399711_95399772
ES.33604.4	chr8	+	3874	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	-20	-2	-20	2	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	8091	False	NA	10	True	AATAAA	-27	NA	95328544	95386905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.5	chr8	+	3338	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	-134	193	-5	-193	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGATCTCCTTCCTGGCT	8106	False	NA	NA	False	ATTAAA	-16	NA	95328559	95386710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.6	chr8	+	3231	15	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-5	2568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	46.9863201976308	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATCTTGAATTTGTAT	8106	False	NA	NA	False	AAGAAA	-16	NA	95328559	95389471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95388525
ES.33604.7	chr8	+	3806	15	NNC	ENSMUSG00000050079.11	novel	3852	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6180477476959	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCACAGCTCTCAT	8108	False	NA	7	True	AATAAA	-24	NA	95328561	95386902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95329059_95334586_95334683_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33604.9	chr8	+	2524	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	3	1325	3	-803	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAAATTCTCTTAGTC	8114	False	NA	NA	False	NA	NA	NA	95328567	95385578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ES.33605.1	chr8	-	4650	2	Antisense	novelGene_ENSMUSG00000050079.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGGCAGGTAACTTGTA	NA	False	NA	NA	False	NA	NA	NA	95352256	95342239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_95343139_95348505
ES.33606.1	chr8	-	2160	1	Antisense	novelGene_ENSMUSG00000031776.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGCAAAGGCTCCCACT	NA	False	NA	NA	False	NA	NA	NA	95400303	95398143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_95398100_95400300
ES.33607.1	chr8	-	1378	4	FSM	ENSMUSG00000031775.6	ENSMUST00000034227.6	1926	4	-4	552	-4	265	multi-exon	FALSE	canonical	2	4	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGGTTATCATTCCT	413	False	NA	-2	True	AATAAA	-18	NA	95422910	95402073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95402908_95403853_95403977_95405972_95406147_95422663
ES.33608.1	chr8	-	285	1	Intergenic	novelGene_27354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGTCATGGTCACTGA	7685	False	NA	NA	False	NA	NA	NA	95427207	95426922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95426900_95427200
ES.33609.1	chr8	-	147	1	Intergenic	novelGene_27355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	95439225	95439078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95439100_95439200
ES.3361.1	chr10	-	3405	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	-33	-2	-33	2	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGAGTAGATCTTCAGA	3078	False	NA	1	True	AATAAA	-19	NA	80754112	80737195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.11	chr10	-	3651	9	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	26	-1	intron_retention	FALSE	canonical	3	226	junction_5	25.8988416729397	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTCAGAGTAGATCTTC	3137	False	NA	-2	True	AATAAA	-16	NA	80754053	80737198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.12	chr10	-	4545	6	NNC	ENSMUSG00000062075.14	novel	1643	9	NA	NA	-594	-2	intron_retention	TRUE	canonical	0	0	junction_5	113.958588969853	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTCAGAGTAGATCTT	NA	False	NA	-3	True	AATAAA	-15	NA	80742840	80737199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80740223_80740386_80742653_80742785
ES.3361.13	chr10	-	3345	12	NNC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.6919929348985	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCCTCAGAGTAGATCT	3126	False	NA	-4	True	AATAAA	-14	NA	80754064	80737200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740216_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.14	chr10	-	7120	6	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	-4918	-4	intron_retention	FALSE	canonical	3	226	junction_4	30.4460178020049	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCTCAGAGTAGATC	9973	False	NA	-5	True	AATAAA	-13	NA	80747164	80737201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739404_80739764_80740223_80740386_80741086_80742984_80743111_80743218
ES.3361.16	chr10	-	3250	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	78.0076919284246	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAGCCTCAGAGTAGA	3114	False	NA	-7	True	AATAAA	-11	NA	80754076	80737203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.18	chr10	-	1959	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	-17	1428	-17	6	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGTCTGTTTCTCG	3094	False	NA	0	True	NA	NA	NA	80754096	80738625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.19	chr10	-	2001	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTAGTCCTTGGTCTGT	3115	False	NA	-6	True	NA	NA	NA	80754075	80738631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.2	chr10	-	5774	11	ISM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	5515	-1	5121	1	3prime_fragment	FALSE	canonical	3	226	junction_8	24.8668453970342	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	8626	False	NA	0	True	AATAAA	-18	NA	80748564	80737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742
ES.3361.21	chr10	-	4182	9	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	5455	-4	intron_retention	FALSE	canonical	3	226	junction_6	25.5831976109321	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTCACTAGTCCTTGGT	8960	False	NA	-10	True	NA	NA	NA	80748230	80738635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742
ES.3361.3	chr10	-	3560	10	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	-8	1	intron_retention	FALSE	canonical	3	226	junction_6	24.8108896840396	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3103	False	NA	0	True	AATAAA	-18	NA	80754087	80737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.4	chr10	-	3467	11	NIC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	16	1	intron_retention	FALSE	canonical	3	226	junction_7	25.7194478945408	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3127	False	NA	0	True	AATAAA	-18	NA	80754063	80737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.5	chr10	-	3360	12	NNC	ENSMUSG00000062075.14	novel	3531	12	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	78.9913689186127	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAGTAGATCTTCAG	3115	False	NA	0	True	AATAAA	-18	NA	80754075	80737196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743104_80743218_80743376_80745742_80745880_80753797
ES.3361.6	chr10	-	3468	11	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	-29	0	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3082	False	NA	-1	True	AATAAA	-17	NA	80754108	80737197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.3361.8	chr10	-	3936	8	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	53	0	intron_retention	FALSE	canonical	3	226	junction_4	24.8924215989772	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3164	False	NA	-1	True	AATAAA	-17	NA	80754026	80737197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ES.33610.1	chr8	+	3155	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	160	0	-35	0	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGAACTTTTCTCTGGG	2339	False	NA	NA	False	AATAAA	-24	NA	95498796	95509055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95498963_95504655_95504777_95506187
ES.33610.2	chr8	+	4298	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	196	-1179	1	1179	multi-exon	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGGTTGAGCGAGCAGA	2375	False	NA	NA	False	NA	NA	NA	95498832	95510234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95498963_95504655_95504777_95506187
ES.33611.1	chr8	+	180	1	Intergenic	novelGene_27356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGTTG	NA	False	NA	NA	False	NA	NA	NA	95517764	95517944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_95517800_95517900
ES.33611.2	chr8	+	407	1	Intergenic	novelGene_27357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGCTCCAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	95517765	95518172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_95517800_95518200
ES.33612.1	chr8	+	1755	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	32	2	32	-2	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTGTTGTTTTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	95564980	95581521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ES.33612.10	chr8	+	3093	1	NIC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	820	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTTCTTGTTGTTTT	NA	False	NA	3	True	AATAAA	-9	NA	95578424	95581517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95578400_95581500
ES.33612.11	chr8	+	2270	1	Genic_Genomic	ENSMUSG00000031782.16	novel	NA	NA	NA	NA	1096	1985	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTCTTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	95581238	95583508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_95581200_95583500
ES.33612.12	chr8	+	4186	8	Fusion	ENSMUSG00000031782.16_ENSMUSG00000031783.11	novel	1580	9	NA	NA	1104	171	intron_retention	FALSE	canonical	3	1933	junction_4	85.6270985144306	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCGTCATCGTGCCAC	NA	False	NA	28	True	AATAAA	-19	NA	95581246	95590540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.13	chr8	+	1215	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	38	327	-13	174	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTCATCGTGCCACTAA	NA	False	NA	31	True	AATAAA	-22	NA	95584115	95590543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.14	chr8	+	8796	9	NNC	ENSMUSG00000031783.11	novel	3881	10	NA	NA	-2	168	intron_retention	FALSE	canonical	0	0	junction_8	672.612990043309	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAAAGATCCA	NA	False	NA	NA	False	NA	NA	NA	95584126	95600331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95592275
ES.33612.15	chr8	+	1175	9	NNC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	5	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	671.977864218755	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAATCTCCTTCATGCG	NA	False	NA	16	True	AATAAA	-7	NA	95584133	95590528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95584270_95584374_95584425_95586878_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.16	chr8	+	1519	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	57	4	6	-4	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAATTGCTTTAATTG	NA	False	NA	NA	False	AATAAA	-13	NA	95584134	95590866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.17	chr8	+	1308	8	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	-7	170	intron_retention	FALSE	canonical	3	1933	junction_5	89.830679728076	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584138	95590539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589513_95590079
ES.33612.2	chr8	+	2961	8	NIC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	153	junction_1	10.2638656838206	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	9	True	AATAAA	-15	NA	95565027	95581523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95578584_95579742_95579899_95580232_95580287_95580741
ES.33612.20	chr8	+	2392	8	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	3	170	intron_retention	FALSE	canonical	3	1933	junction_4	91.1370351924697	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584148	95590539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.21	chr8	+	3420	5	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	4	170	intron_retention	FALSE	canonical	3	1974	junction_2	92.8587637221173	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	NA	False	NA	27	True	AATAAA	-18	NA	95584149	95590539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95588862_95589148
ES.33612.24	chr8	+	2177	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	81	-678	13	678	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCCCACGGTGGCTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	95584158	95591548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.25	chr8	+	1156	9	NNC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	16	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	671.977864218755	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTCATCGTGCCACTAA	NA	False	NA	31	True	AATAAA	-22	NA	95584161	95590543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95584270_95584374_95584412_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.26	chr8	+	1177	9	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	24	172	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	880.881509838298	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCGTCATCGTGCCACT	NA	False	NA	29	True	AATAAA	-20	NA	95584169	95590541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588701_95588772_95589148_95589318_95589437_95589513_95590079
ES.33612.27	chr8	+	1176	9	NNC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	29	164	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	671.62861761542	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCTTCATGCGTCATC	NA	False	NA	21	True	AATAAA	-12	NA	95584174	95590533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589407_95589513_95590079
ES.33612.28	chr8	+	1362	7	ISM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	2440	330	-1495	171	3prime_fragment	FALSE	canonical	3	1933	junction_3	91.8803569866813	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCGTCATCGTGCCAC	NA	False	NA	28	True	AATAAA	-19	NA	95586517	95590540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ES.33612.3	chr8	+	1845	10	NNC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.3708796998874	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTTCTTGTTGTTTT	NA	False	NA	3	True	AATAAA	-9	NA	95565030	95581517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95577591_95577736_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ES.33612.4	chr8	+	1811	9	NNC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.1292394488147	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTCTTGTTGTTTTGT	NA	False	NA	5	True	AATAAA	-11	NA	95565039	95581519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577345_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ES.33612.5	chr8	+	2816	9	NNC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.3425627301421	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTTCTTGTTGTTTT	NA	False	NA	3	True	AATAAA	-9	NA	95565039	95581517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95565126_95569245_95570521_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ES.33612.6	chr8	+	2852	8	NIC	ENSMUSG00000031782.16	novel	1789	9	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	145	junction_5	12.8825146486806	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTCTTGTTGTTTTGT	NA	False	NA	5	True	AATAAA	-11	NA	95565040	95581519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95579899_95580232_95580287_95580741
ES.33612.7	chr8	+	4105	7	NIC	ENSMUSG00000031782.16	novel	831	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	153	junction_1	10.5514611942296	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTGTTGTTTTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	95565040	95581521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95579899_95580232_95580287_95580741
ES.33612.8	chr8	+	1842	6	NNC	ENSMUSG00000031782.16	novel	546	2	NA	NA	-1458	-6	intron_retention	FALSE	canonical	0	0	junction_1	66.8029939448824	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTTCTTGTTGTTTT	NA	False	NA	3	True	AATAAA	-9	NA	95575294	95581517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95575363_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232
ES.33612.9	chr8	+	1329	6	ISM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	11802	-2	-2	2	3prime_fragment	FALSE	canonical	3	145	junction_2	11.5481600266016	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGTTTTGTCTATGT	NA	False	NA	11	True	AATAAA	-17	NA	95576750	95581525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ES.33613.1	chr8	-	173	2	Antisense	novelGene_ENSMUSG00000090188.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	719	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATAGCAGGGAG	9923	False	NA	NA	False	NA	NA	NA	95566414	95543361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_95543380_95566259
ES.33613.10	chr8	-	3042	8	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-40	9	intron_retention	FALSE	canonical	3	1341	junction_7	180.507787157479	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTGTGTCTTTGTGT	NA	False	NA	-5	True	ATTAAA	-28	NA	95564933	95549179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.11	chr8	-	2989	8	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-22	8	intron_retention	FALSE	canonical	3	23	junction_6	576.935358738971	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGTGTGTCTTTGTG	NA	False	NA	-6	True	ATTAAA	-27	NA	95564915	95549180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559176_95559329_95564879
ES.33613.12	chr8	-	1404	8	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-40	8	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	559.57553155066	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGTGTGTCTTTGTG	NA	False	NA	-6	True	ATTAAA	-27	NA	95564933	95549180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95559142_95559329_95564879
ES.33613.14	chr8	-	1197	7	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-20	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	606.255561257425	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGAGTGTGTCTTTGT	NA	False	NA	-7	True	ATTAAA	-26	NA	95564913	95549181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95564879
ES.33613.15	chr8	-	1828	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	-15	-6	-15	6	multi-exon	FALSE	canonical	3	211	junction_8	506.411394026635	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGAGTGTGTCTTTG	NA	False	NA	-8	True	ATTAAA	-25	NA	95564908	95549182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ES.33613.16	chr8	-	1536	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-32	5	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_8	565.262535796421	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGAGTGTGTCTTT	NA	False	NA	-9	True	ATTAAA	-24	NA	95564925	95549183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559319_95564879
ES.33613.17	chr8	-	3535	6	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-76	2	intron_retention	TRUE	canonical	1	2	junction_1	706.672371046159	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTACTGTGAGTGTGTC	NA	False	NA	-12	True	ATTAAA	-21	NA	95565062	95549186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95551960_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.18	chr8	-	1463	8	NNC	ENSMUSG00000031781.15	novel	1807	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	579.966114421826	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95559330	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559176
ES.33613.19	chr8	-	1562	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	548.641717676481	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564916	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559112_95559329_95564879
ES.33613.2	chr8	-	2464	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	55	1840	-38	917	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACAGCCTGTGCCTGA	NA	False	NA	NA	False	NA	NA	NA	95564931	95548271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.20	chr8	-	3139	5	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_4	720.22405368052	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564933	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95564879
ES.33613.21	chr8	-	3585	4	NNC	ENSMUSG00000031781.15	novel	1807	9	NA	NA	-1596	0	intron_retention	TRUE	non_canonical	0	0	junction_3	734.158475171857	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95554938	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95553355_95553590
ES.33613.22	chr8	-	2854	8	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-42	0	intron_retention	FALSE	canonical	3	1341	junction_7	181.213708541228	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564935	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95550360_95551843_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.23	chr8	-	3603	7	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-21	0	intron_retention	FALSE	canonical	3	1341	junction_6	157.791001010831	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564914	95549188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95559329_95564879
ES.33613.24	chr8	-	4072	8	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	1341	junction_7	164.481746397463	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTTTACTGTGAGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	95564915	95549189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95558554_95559142_95559329_95564879
ES.33613.25	chr8	-	3293	7	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	1341	junction_6	190.193468751047	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTTTTACTGTGAGTG	NA	False	NA	-16	True	ATTAAA	-17	NA	95564931	95549190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95550360_95551843_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.26	chr8	-	5639	7	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-15	-4	intron_retention	FALSE	canonical	0	0	junction_2	649.275750355733	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCCTTTTACTGTGAG	NA	False	NA	-18	True	ATTAAA	-15	NA	95564908	95549192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95553364_95553599_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.27	chr8	-	1504	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_5	567.858422056061	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCCTTTTACTGTGA	NA	False	NA	-19	True	ATTAAA	-14	NA	95564899	95549193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555062_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.28	chr8	-	3513	4	NNC	ENSMUSG00000031781.15	novel	1008	7	NA	NA	-1528	-5	intron_retention	TRUE	non_canonical	0	0	junction_3	734.158475171857	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCCTTTTACTGTGA	NA	False	NA	-19	True	ATTAAA	-14	NA	95554870	95549193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95553364_95553598
ES.33613.29	chr8	-	161	1	Intergenic	novelGene_27358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACCAAAA	9921	False	NA	NA	False	NA	NA	NA	95566416	95566255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95566300_95566400
ES.33613.3	chr8	-	2077	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	71	2211	-22	546	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGCCCATTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95564915	95548642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.4	chr8	-	2042	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	-21	546	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	543.20023932248	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGCCCATTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	95564914	95548642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559176_95559329_95564879
ES.33613.5	chr8	-	3834	8	NIC	ENSMUSG00000031781.15	novel	1807	9	NA	NA	-2	545	intron_retention	FALSE	canonical	3	211	junction_7	540.689091694618	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTTGGCCCATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	95564891	95548643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95549836_95550280_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ES.33613.7	chr8	-	1961	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	78	2320	-15	437	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACCTCTGGTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	95564908	95548751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33613.8	chr8	-	1647	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	-31	2743	-31	14	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTTTGTGTCTGTG	NA	False	NA	0	True	ATTAAA	-33	NA	95565017	95549174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ES.33614.1	chr8	-	1118	2	Antisense	novelGene_ENSMUSG00000031783.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGCAAGCAAGCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	95587878	95586629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_95586940_95587070
ES.33615.1	chr8	-	3084	7	NNC	ENSMUSG00000040631.9	novel	2590	9	NA	NA	201	0	intron_retention	FALSE	canonical	1	1	junction_5	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGTTGATCAATAAATA	NA	False	NA	2	True	AATAAA	-18	NA	95597631	95590487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95591876_95591969_95592091_95592248_95593275_95593375_95593496_95593755_95593871_95593957_95594128_95597487
ES.33615.2	chr8	-	2582	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	3	5	3	-5	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACTACTGTTGATCAAT	NA	False	NA	-3	True	AATAAA	-13	NA	95602955	95590492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
ES.33615.3	chr8	-	2668	9	NNC	ENSMUSG00000040631.9	novel	2590	9	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.44629822384762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACAACTACTGTTGA	NA	False	NA	-8	True	AATAAA	-8	NA	95602957	95590497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593302_95593375_95593496_95593755_95593871_95593957_95594128_95597487_95597697_95602758
ES.33615.4	chr8	-	1519	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	47	1024	47	-1024	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTATAAACGAGGCTT	NA	False	NA	NA	False	AATATA	-16	NA	95602911	95591511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
ES.33616.1	chr8	-	1704	8	ISM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	4771	2	4194	-2	3prime_fragment	FALSE	canonical	2	12	junction_2	2.72554057547699	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGAGTTCTGAAAGTG	NA	False	NA	-2	True	AATAAA	-17	NA	95639955	95629498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710
ES.33617.1	chr8	+	1972	5	ISM	ENSMUSG00000061577.13	ENSMUST00000128308.3	2917	12	13586	0	3118	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTACCACAGTGAGGT	NA	False	NA	NA	False	NA	NA	NA	95663912	95669908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95663971_95664200_95664470_95665168_95665287_95668132_95668411_95668659
ES.33618.1	chr8	+	129	1	Intergenic	novelGene_27359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9004	False	NA	NA	False	NA	NA	NA	95687328	95687457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_95687300_95687500
ES.33619.1	chr8	+	3597	14	NIC	ENSMUSG00000031785.17	novel	713	5	NA	NA	-155	-9	intron_retention	FALSE	canonical	0	0	junction_1	19.769380424456	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCAGTTTTGTTTG	NA	False	NA	37	True	NA	NA	NA	95701223	95740836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95701525_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.10	chr8	+	3547	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	36	-9	36	-9	multi-exon	FALSE	canonical	1	2	junction_1	19.2826991162311	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCAGTTTTGTTTG	7979	False	NA	37	True	NA	NA	NA	95711034	95740836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.11	chr8	+	2754	9	ISM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	21558	25	-218	-22	3prime_fragment	FALSE	canonical	3	57	junction_1	4.89897948556636	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCATGGCAAAGCAGCA	NA	False	NA	3	True	AATAAA	-16	NA	95732556	95740802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.12	chr8	+	2628	10	NNC	ENSMUSG00000031785.17	novel	713	5	NA	NA	-174	2	intron_retention	FALSE	canonical	0	0	junction_1	21.249836600679	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	NA	False	NA	30	True	AATAAA	-43	NA	95732600	95740829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95732719_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.2	chr8	+	3654	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	-47	9	-47	-9	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCAGTTTTGTTTG	632	False	NA	37	True	NA	NA	NA	95703687	95740836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.3	chr8	+	3621	14	NIC	ENSMUSG00000031785.17	novel	3616	14	NA	NA	-1	7	intron_retention	FALSE	canonical	2	5	junction_2	18.2244390178352	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCGTCTCAGTTTTGTT	678	False	NA	35	True	NA	NA	NA	95703733	95740834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95704046_95729066_95729142_95729863_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.4	chr8	+	4549	12	NIC	ENSMUSG00000031785.17	novel	3011	15	NA	NA	0	2	intron_retention	FALSE	canonical	3	57	junction_6	10.2020902087807	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGCCCGTCTCAGTT	681	False	NA	30	True	AATAAA	-43	NA	95703736	95740829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.33619.9	chr8	+	3907	14	NIC	ENSMUSG00000031785.17	novel	3574	14	NA	NA	-326	-5	intron_retention	FALSE	canonical	1	2	junction_1	22.9016420175627	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTTTGGAGAGTTGCC	7617	False	NA	20	True	AATAAA	-33	NA	95710672	95740819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95711286_95729066_95729142_95729863_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ES.3362.1	chr10	+	808	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	-2	478	-2	-33	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCCCCCAGAACAATCC	246	False	NA	17	True	AATAAA	-20	NA	80765904	80767560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ES.3362.2	chr10	+	1284	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	248	False	NA	5	True	AATAAA	-14	NA	80765906	80768038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ES.3362.3	chr10	+	1419	2	FSM	ENSMUSG00000015312.10	ENSMUST00000219449.2	667	2	-307	-445	-307	0	multi-exon	FALSE	canonical	3	88	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	680	False	NA	5	True	AATAAA	-14	NA	80766338	80768038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80767086_80767366
ES.33620.1	chr8	-	172	1	Intergenic	novelGene_27360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGGGGGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	95755441	95755269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95755300_95755400
ES.33621.1	chr8	+	2711	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	-79	1145	-79	-1145	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGAATATCCGCTGG	730	False	NA	21	True	ATTAAA	-25	NA	95807734	95825694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.10	chr8	+	2733	19	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	81	-1153	intron_retention	FALSE	canonical	3	123	junction_1	16.5827517113713	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	890	False	NA	13	True	ATTAAA	-17	NA	95807894	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.11	chr8	+	641	4	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	83	-6798	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	67.6609192961491	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTAGTGAAAGCTTGG	892	False	NA	NA	False	AATAAA	-15	NA	95807896	95814665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95814487
ES.33621.12	chr8	+	3059	19	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	96	-1155	intron_retention	FALSE	canonical	0	0	junction_1	38.3968877339599	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCCTTATGAGAGGAA	905	False	NA	11	True	ATTAAA	-15	NA	95807909	95825684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95808130_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.13	chr8	+	3800	18	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	97	-332	intron_retention	FALSE	canonical	3	15	junction_16	36.1972680534439	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTAAATAGGATTTGGG	906	False	NA	NA	False	AGTAAA	-20	NA	95807910	95826507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824851_95824946_95825064_95825281
ES.33621.14	chr8	+	3663	18	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	97	-1155	intron_retention	FALSE	canonical	0	0	junction_2	39.5978049791848	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCCTTATGAGAGGAA	906	False	NA	11	True	ATTAAA	-15	NA	95807910	95825684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813918_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.15	chr8	+	3376	16	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	98	-1153	intron_retention	FALSE	canonical	3	123	junction_1	17.0601550077626	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	907	False	NA	13	True	ATTAAA	-17	NA	95807911	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821873_95821979_95822425_95822516_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824809_95824946_95825064_95825281
ES.33621.16	chr8	+	3805	17	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	98	-1153	intron_retention	FALSE	canonical	3	123	junction_1	17.265844172817	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	907	False	NA	13	True	ATTAAA	-17	NA	95807911	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95825064_95825281
ES.33621.17	chr8	+	2684	20	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	109	-1157	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	36.5719417751882	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTTCCTTATGAGAGG	918	False	NA	9	True	ATTAAA	-13	NA	95807922	95825682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95808106_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.18	chr8	+	3068	19	NNC	ENSMUSG00000031787.9	novel	4551	17	NA	NA	128	-1157	intron_retention	FALSE	canonical	0	0	junction_1	47.9226807819986	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTTCCTTATGAGAGG	937	False	NA	9	True	ATTAAA	-13	NA	95807941	95825682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95808130_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824851_95824946_95825064_95825281
ES.33621.19	chr8	+	2513	19	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	1410	1147	0	-1147	3prime_fragment	FALSE	canonical	3	130	junction_5	15.373939790807	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAGAGGAATATCCGCT	2219	False	NA	19	True	ATTAAA	-23	NA	95809223	95825692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.2	chr8	+	3554	16	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	-9	-1153	intron_retention	FALSE	canonical	3	123	junction_1	17.6312853253024	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	800	False	NA	13	True	ATTAAA	-17	NA	95807804	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821873_95821979_95822131_95822233_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.20	chr8	+	3393	16	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	66	-1153	intron_retention	FALSE	canonical	3	131	junction_11	15.1490373731579	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	2285	False	NA	13	True	ATTAAA	-17	NA	95809289	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.21	chr8	+	1395	10	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	14419	1153	-273	-1153	3prime_fragment	FALSE	canonical	3	131	junction_5	13.8644228953903	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	NA	False	NA	13	True	ATTAAA	-17	NA	95822232	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.3	chr8	+	3354	17	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	6	-1155	intron_retention	FALSE	canonical	0	0	junction_15	40.4009204721873	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCCTTATGAGAGGAA	815	False	NA	11	True	ATTAAA	-15	NA	95807819	95825684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821873_95821979_95822131_95822233_95822425_95822516_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824800_95824946_95825064_95825281
ES.33621.4	chr8	+	3402	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	43	332	43	-332	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTAAATAGGATTTGGG	852	False	NA	NA	False	AGTAAA	-20	NA	95807856	95826507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.5	chr8	+	2585	20	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	57	-1153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.6975130887276	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	866	False	NA	13	True	ATTAAA	-17	NA	95807870	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822965_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ES.33621.6	chr8	+	3434	16	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	58	-1155	intron_retention	FALSE	canonical	3	15	junction_14	36.6359871650206	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCCTTATGAGAGGAA	867	False	NA	11	True	ATTAAA	-15	NA	95807871	95825684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824851_95824946_95825064_95825281
ES.33621.7	chr8	+	2487	19	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	60	-1153	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	38.4292278813347	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCTTATGAGAGGAATA	869	False	NA	13	True	ATTAAA	-17	NA	95807873	95825686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824733_95824809_95824946_95825064_95825281
ES.33621.8	chr8	+	2559	20	NNC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	63	1153	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	36.9808665060004	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCTGACTTCCTTATG	872	False	NA	4	True	ATTAAA	-8	NA	95807876	95825677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825071_95825281
ES.33621.9	chr8	+	3375	15	NIC	ENSMUSG00000031787.9	novel	3777	20	NA	NA	71	-1154	intron_retention	FALSE	canonical	3	123	junction_1	16.8686401469758	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCTTATGAGAGGAAT	880	False	NA	12	True	ATTAAA	-16	NA	95807884	95825685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824809_95824946
ES.33622.1	chr8	-	1813	1	FSM	ENSMUSG00000110516.2	ENSMUST00000212448.2	1006	1	-793	-14	-793	14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGCCAAACTCAACC	175	False	NA	NA	False	NA	NA	NA	95818097	95816284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95816300_95818100
ES.33623.1	chr8	-	3619	22	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-15	6	combination_of_known_junctions	TRUE	canonical	3	25	junction_2	22.097495779565	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCGTCAGTACTGGG	NA	False	NA	2	True	ATTAAA	-27	NA	95869190	95826449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.11	chr8	-	3816	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	25	junction_2	21.8275055835521	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95869195	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.12	chr8	-	3650	22	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	27.4957015811959	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95869165	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95853669_95853761_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.13	chr8	-	3606	22	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-1091	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	27.0789556901636	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95870266	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95870140
ES.33623.14	chr8	-	4220	18	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	26	junction_15	18.2502784734881	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95869191	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
ES.33623.15	chr8	-	2387	14	NNC	ENSMUSG00000031788.15	novel	2898	16	NA	NA	501	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.3575613409445	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95836551	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827066_95828108_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411
ES.33623.16	chr8	-	3672	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.4667850375802	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95869170	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95868951
ES.33623.17	chr8	-	2641	16	NNC	ENSMUSG00000031788.15	novel	2898	16	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	23.7584137143502	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	331	False	NA	-6	True	ATTAAA	-19	NA	95864445	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836794_95864414
ES.33623.18	chr8	-	2930	16	NNC	ENSMUSG00000031788.15	novel	2453	18	NA	NA	69	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	23.5141564925378	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	NA	False	NA	-6	True	ATTAAA	-19	NA	95837372	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95833890_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321
ES.33623.19	chr8	-	3368	18	NNC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	42	-2	intron_retention	FALSE	canonical	0	0	junction_17	28.7666906568948	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCAATCTGAATCGTCA	292	False	NA	-6	True	ATTAAA	-19	NA	95864484	95826457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864264
ES.33623.20	chr8	-	3262	19	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	17.8975134489214	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGCAATCTGAATCGT	NA	False	NA	-8	True	ATTAAA	-17	NA	95869191	95826459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
ES.33623.23	chr8	-	3668	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_20	27.9622960430648	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGCAATCTGAATCGT	NA	False	NA	-8	True	ATTAAA	-17	NA	95869190	95826459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864202_95864494_95869059
ES.33623.24	chr8	-	4757	20	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-1504	1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.346490639666	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTGCAATCTGAATCG	NA	False	NA	-9	True	ATTAAA	-16	NA	95866054	95826460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542
ES.33623.25	chr8	-	3673	22	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-526	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	27.0789556901636	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	False	NA	-10	True	ATTAAA	-15	NA	95869701	95826461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869504
ES.33623.26	chr8	-	3278	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	-7	6	-7	0	multi-exon	FALSE	canonical	3	25	junction_2	24.0325264354334	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	False	NA	-10	True	ATTAAA	-15	NA	95869182	95826461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
ES.33623.28	chr8	-	3772	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-995	0	intron_retention	FALSE	canonical	0	0	junction_16	31.4993650729662	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	False	NA	-10	True	ATTAAA	-15	NA	95870170	95826461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855254_95855348_95855823_95855963_95861344_95861488_95864542_95864748_95870140
ES.33623.3	chr8	-	3603	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-1113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.4667850375802	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95870288	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95870140
ES.33623.30	chr8	-	3607	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	27.214472252829	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAGTGCAATCTGAAT	237	False	NA	-11	True	ATTAAA	-14	NA	95864539	95826462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864202
ES.33623.31	chr8	-	3484	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-262	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	27.6886258236121	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAGTGCAATCTGAAT	NA	False	NA	-11	True	ATTAAA	-14	NA	95869437	95826462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855960_95861344_95861488_95864542_95864748_95869398
ES.33623.32	chr8	-	3560	22	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.0964515587342	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAGTGCAATCTGAAT	NA	False	NA	-11	True	ATTAAA	-14	NA	95869177	95826462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829323_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.33	chr8	-	3279	20	NNC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	-1090	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.2254584878102	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAGTGCAATCTGAAT	NA	False	NA	-11	True	ATTAAA	-14	NA	95870265	95826462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95870140
ES.33623.34	chr8	-	4010	9	NIC	ENSMUSG00000031788.15	novel	2898	16	NA	NA	-3161	-2	intron_retention	FALSE	canonical	3	25	junction_2	29.0807066626655	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACACAAGTGCAATCTGAA	NA	False	NA	-12	True	ATTAAA	-13	NA	95833798	95826463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95832453_95833090
ES.33623.35	chr8	-	3558	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	28.0236953309159	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTACACAAGTGCA	NA	False	NA	-19	True	ATTAAA	-6	NA	95869181	95826470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835107_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855820_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.36	chr8	-	2679	20	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	3163	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	23.0172764212106	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGAGTCTCTGTGTGGCT	3413	False	NA	NA	False	NA	NA	NA	95861363	95826929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344
ES.33623.37	chr8	-	3158	2	NNC	ENSMUSG00000031788.15	novel	598	5	NA	NA	-1090	-5830	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAACAAATATT	NA	False	NA	NA	False	NA	NA	NA	95870265	95861714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95864748_95870140
ES.33623.4	chr8	-	5970	19	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	10	0	intron_retention	FALSE	canonical	3	25	junction_1	20.0748598998847	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95869165	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827302_95828036_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.5	chr8	-	3722	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-151	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.2668374307977	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95869326	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.6	chr8	-	5289	20	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-1105	0	intron_retention	FALSE	canonical	0	0	junction_19	23.2289579519751	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95870280	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95870140
ES.33623.7	chr8	-	3687	23	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.3244883985162	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95869198	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832114_95832181_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
ES.33623.8	chr8	-	3425	21	NNC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	31.5577248863095	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	205	False	NA	-4	True	ATTAAA	-21	NA	95864571	95826455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95839898_95840048_95853153_95853336_95855823_95855960_95861344_95861488_95864542
ES.33624.1	chr8	-	191	1	Intergenic	novelGene_27361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTGAAAAACTGGGTG	NA	False	NA	NA	False	NA	NA	NA	95934240	95934049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95934000_95934200
ES.33625.1	chr8	-	177	1	Intergenic	novelGene_27362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95938273	95938096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_95938100_95938300
ES.33626.1	chr8	+	2691	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	-926	-7	-926	7	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTATTTTAAACTACTT	NA	False	NA	19	True	AATAAA	-20	NA	96057985	96074142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
ES.33626.2	chr8	+	2414	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-675	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058236	96074135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
ES.33626.3	chr8	+	8375	4	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-323	2	intron_retention	FALSE	canonical	3	10	junction_1	94.1358356607916	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	False	NA	14	True	AATAAA	-15	NA	96058588	96074137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96059075_96059995_96060163_96065261_96072001_96073154
ES.33626.4	chr8	+	2963	6	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	182	junction_5	20.4215572373901	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058932	96074135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96072001_96073154
ES.33626.5	chr8	+	8048	4	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	182	junction_3	23.4236347876812	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058932	96074135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96059094_96059995_96060163_96065261_96072001_96073154
ES.33626.6	chr8	+	1706	7	NNC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	68.6601938696813	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058942	96074135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069770_96069804_96070584_96070691_96071916_96072001_96073154
ES.33626.7	chr8	+	1633	6	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	91.4649659705835	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGGTGTCTTATTTT	NA	False	NA	10	True	AATAAA	-11	NA	96058950	96074133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96073154
ES.33626.8	chr8	+	6064	1	Genic_Genomic	ENSMUSG00000031792.16	novel	NA	NA	NA	NA	-3703	7	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTATTTTAAACTACTT	NA	False	NA	19	True	AATAAA	-20	NA	96068078	96074142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_96068100_96074100
ES.33626.9	chr8	+	1175	3	ISM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	11669	0	-1201	0	3prime_fragment	FALSE	canonical	3	182	junction_2	11	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96070580	96074135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_96070691_96071916_96072001_96073154
ES.33627.1	chr8	-	6390	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-260	1102	-260	-1102	multi-exon	FALSE	canonical	3	26	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTTCATTCTGTCCAG	NA	False	NA	NA	False	AATAAA	-21	NA	96058838	96050740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96056441_96058148
ES.33627.2	chr8	-	4397	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-284	3119	-284	-3119	multi-exon	FALSE	canonical	3	26	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTCCACTCGTTCTTT	NA	False	NA	0	True	AGTAAA	-23	NA	96058862	96052757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96056441_96058148
ES.33627.3	chr8	-	4296	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-285	3221	-285	-3221	multi-exon	FALSE	canonical	3	26	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGAATGACTCCA	NA	False	NA	-102	True	TATAAA	-16	NA	96058863	96052859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96056441_96058148
ES.33628.1	chr8	+	5171	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	-32	-4	-32	4	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAAGGTACAGGAGTC	NA	False	NA	NA	False	NA	NA	NA	96078863	96101712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
ES.33628.2	chr8	+	4360	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	-11	786	-11	-786	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTACAGGGGCAGA	NA	False	NA	9	True	AATAAA	-18	NA	96078884	96100922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
ES.33628.3	chr8	+	3887	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	14	1234	14	-1234	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTGGCTGCACTTGTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	96078909	96100474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
ES.33628.4	chr8	+	3660	4	ISM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	17574	13	-29	-13	3prime_fragment	FALSE	canonical	3	35	junction_1	4.24264068711928	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACATTC	NA	False	NA	NA	False	NA	NA	NA	96096469	96101695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_96096900_96097323_96097475_96097633_96097750_96098732
ES.33629.1	chr8	+	177	1	Intergenic	novelGene_27363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATAATGCAT	NA	False	NA	NA	False	NA	NA	NA	96127338	96127515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96127300_96127500
ES.3363.1	chr10	+	182	1	Intergenic	novelGene_2592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAGAATTTCA	NA	False	NA	NA	False	NA	NA	NA	80778222	80778404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80778200_80778400
ES.33630.1	chr8	-	1324	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	-26	-3	-26	3	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTACTTTTTTATATGA	NA	False	NA	-3	True	AATAAA	-27	NA	96161523	96146873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ES.33630.10	chr8	-	7156	3	FSM	ENSMUSG00000031796.8	ENSMUST00000212807.2	361	3	-4829	-1966	-4471	-2	multi-exon	FALSE	canonical	3	502	junction_2	12.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTATCTTTACTTTT	NA	False	NA	-11	True	AATAAA	-19	NA	96156295	96146881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96148875_96149410_96149523_96151244
ES.33630.11	chr8	-	1113	5	FSM	ENSMUSG00000031796.8	ENSMUST00000212684.2	1023	5	57	-147	-16	-3	multi-exon	FALSE	canonical	3	46	junction_4	193.603977231874	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATTTATCTTTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	96161401	96146882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96161115
ES.33630.12	chr8	-	4311	1	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	6	-7664	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96161452	96157141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96157100_96161500
ES.33630.2	chr8	-	4119	5	ISM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	6967	0	-2706	0	3prime_fragment	FALSE	canonical	3	468	junction_1	23.3773394551219	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96154530	96146876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244
ES.33630.3	chr8	-	2103	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161497	96146879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
ES.33630.5	chr8	-	1997	4	NIC	ENSMUSG00000031796.8	novel	1023	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_3	214.197727968031	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161471	96146879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96161115
ES.33630.6	chr8	-	1296	6	NNC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	200.500773065841	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161419	96146879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149605_96151244_96151325_96161115
ES.33630.7	chr8	-	2502	4	FSM	ENSMUSG00000031796.8	ENSMUST00000213086.2	2544	4	42	0	-6	0	multi-exon	FALSE	canonical	3	502	junction_2	10.6562449087639	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161430	96146879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96148875_96149410_96149523_96151244_96151325_96161115
ES.33630.8	chr8	-	1756	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	475	junction_1	20.2654262230036	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	False	NA	-9	True	AATAAA	-21	NA	96161495	96146879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ES.33630.9	chr8	-	1154	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_1	223.913487758107	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTATCTTTACTTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	96161471	96146880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96147298_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ES.33631.1	chr8	+	160	1	Intergenic	novelGene_27365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	96201343	96201503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96201300_96201500
ES.33632.1	chr8	-	3755	1	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	10860	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATGACTTTCATGG	NA	False	NA	NA	False	AATAAA	-16	NA	96176482	96172727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96172700_96176500
ES.33632.10	chr8	-	2546	11	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	11	1883	11	-5	intron_retention	FALSE	canonical	3	171	junction_1	42.5169378013046	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215444	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
ES.33632.11	chr8	-	1729	10	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	124.225998749988	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215464	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96203839_96203942_96214192_96214305_96215030
ES.33632.12	chr8	-	1831	12	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	88.3077825721489	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215455	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
ES.33632.13	chr8	-	3969	12	NNC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.5229276246763	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215485	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184698_96185231_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.14	chr8	-	1677	9	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	105.040468391949	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96215455	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96214192_96214305_96214971
ES.33632.16	chr8	-	1345	10	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	-89	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	99.4102362019545	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	False	NA	-11	True	AATAAA	-8	NA	96214303	96174606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96199998_96200050_96203839_96203942_96214192
ES.33632.18	chr8	-	5509	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-118	1388	-71	1375	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCGGACCTTAACTTGCA	NA	False	NA	0	True	NA	NA	NA	96215526	96175989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.19	chr8	-	5151	9	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	2	1344	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	130.672718556706	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTTCCCAACTAGGA	NA	False	NA	-31	True	AATAAA	-17	NA	96215411	96176020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96215030
ES.33632.2	chr8	-	8770	8	NNC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	-5298	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.909391160545	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96197911	96174599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184698_96185231_96186802_96187305_96187417_96188173_96188258_96192278
ES.33632.20	chr8	-	5241	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-118	1656	-71	1107	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGCTCTTCTTGATGTA	NA	False	NA	0	True	AATAAA	-19	NA	96215526	96176257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.21	chr8	-	5386	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-75	1106	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	89.8287815791798	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGCTCTTCTTGATGT	NA	False	NA	-1	True	AATAAA	-18	NA	96215530	96176258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214829
ES.33632.23	chr8	-	5096	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	13	1105	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	87.7781293945138	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215442	96176259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
ES.33632.24	chr8	-	5866	10	ISM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-78	1658	-31	1105	intron_retention	FALSE	canonical	3	275	junction_8	20.1720990540626	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215486	96176259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
ES.33632.25	chr8	-	4919	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-152	1105	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	90.7083237635885	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96216819	96176259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96216584
ES.33632.26	chr8	-	4986	9	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-13	1105	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	101.486452297831	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215426	96176259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96214971
ES.33632.28	chr8	-	4907	11	NNC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-124	1102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	117.454672108009	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGTGGCTCTTCTTG	NA	False	NA	-5	True	AATAAA	-14	NA	96215213	96176262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192327_96199998_96200050_96203839_96203938_96214192_96214305_96214971
ES.33632.3	chr8	-	3980	12	NNC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.5229276246763	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96215446	96174599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184717_96185207_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.30	chr8	-	3504	3	ISM	ENSMUSG00000046707.10	ENSMUST00000212750.2	2994	4	2694	-15	2694	15	3prime_fragment	FALSE	canonical	3	320	junction_2	6	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCCACAAAAACCTGTGG	NA	False	NA	NA	False	AATGAA	-20	NA	96184648	96177349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96180072_96182485_96182635_96184015
ES.33632.31	chr8	-	3326	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-100	3553	-53	-790	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGACATACATTCAGTTA	NA	False	NA	-7	True	AATAAA	-30	NA	96215508	96178154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.32	chr8	-	3412	11	NNC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-1	-793	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.6537506051989	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGGACATACATTCAG	NA	False	NA	-10	True	AATAAA	-27	NA	96215414	96178157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186985_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.33	chr8	-	3362	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-1	-802	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	89.8287815791798	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTTTATAAAGCAGGACA	NA	False	NA	-19	True	AATAAA	-18	NA	96215414	96178166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214829
ES.33632.34	chr8	-	4528	6	NNC	ENSMUSG00000046707.10	novel	706	8	NA	NA	-901	-804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.188049753112	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTTTATAAAGCAGGA	NA	False	NA	-21	True	AATAAA	-16	NA	96188243	96178168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96180072_96182485_96182635_96184015_96184717_96185207_96186802_96187305_96187417_96188173
ES.33632.35	chr8	-	3189	10	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	19	-804	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	94.6538854178282	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTTTATAAAGCAGGA	NA	False	NA	-21	True	AATAAA	-16	NA	96215436	96178168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96203839_96203942_96214192_96214305_96214971
ES.33632.36	chr8	-	3105	9	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	-805	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	101.486452297831	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATCTTTATAAAGCAGG	NA	False	NA	-22	True	AATAAA	-15	NA	96215455	96178169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96214971
ES.33632.37	chr8	-	3188	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	11	-805	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	87.7781293945138	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATCTTTATAAAGCAGG	NA	False	NA	-22	True	AATAAA	-15	NA	96215444	96178169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
ES.33632.38	chr8	-	3039	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-97	3837	-50	-1074	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTCTATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	96215505	96178438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.4	chr8	-	5639	11	NNC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	-91	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.2949067582634	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96214305	96174599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96175047_96175752_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
ES.33632.41	chr8	-	2066	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-118	4831	-71	562	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCTTCTAAGTGTATT	NA	False	NA	52	True	NA	NA	NA	96215526	96179432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.42	chr8	-	1771	9	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	6	497	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	101.486452297831	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTCATGTGTTATGTA	NA	False	NA	-13	True	ATTAAA	-31	NA	96215449	96179497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96214971
ES.33632.43	chr8	-	1927	10	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-49	496	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	94.6538854178282	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTCATGTGTTATGT	NA	False	NA	-14	True	ATTAAA	-30	NA	96215504	96179498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96203839_96203942_96214192_96214305_96214971
ES.33632.45	chr8	-	1814	11	NIC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	7	447	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	87.7781293945138	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGATTAAA	NA	False	NA	-63	True	NA	NA	NA	96215448	96179547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
ES.33632.46	chr8	-	1930	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-97	4946	-50	447	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGATTAAA	NA	False	NA	-63	True	NA	NA	NA	96215505	96179547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.49	chr8	-	1537	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-94	5336	-47	57	multi-exon	FALSE	canonical	3	227	junction_10	28.5350661467605	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAACTTGAAGGAAA	NA	False	NA	-17	True	AATAAA	-12	NA	96215502	96179937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.5	chr8	-	2469	1	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	10274	2	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATGGAGCGTATTTAGT	NA	False	NA	-4	True	AATAAA	-15	NA	96177068	96174599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96174600_96177100
ES.33632.50	chr8	-	2144	10	ISM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	-34	5336	13	57	intron_retention	FALSE	canonical	3	275	junction_8	20.1720990540626	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAACTTGAAGGAAA	NA	False	NA	-17	True	AATAAA	-12	NA	96215442	96179937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192
ES.33632.51	chr8	-	170	1	Intergenic	novelGene_27364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGAAGACTGTC	NA	False	NA	NA	False	NA	NA	NA	96185225	96185055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96185100_96185200
ES.33632.6	chr8	-	1971	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	-76	1878	-76	0	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATGGAGCGTATTTA	NA	False	NA	-6	True	AATAAA	-13	NA	96215531	96174601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ES.33632.7	chr8	-	3437	4	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	28689	1880	576	-2	intron_retention	FALSE	canonical	3	171	junction_1	73.2317478207976	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGGATGGAGCGTATT	NA	False	NA	-8	True	AATAAA	-11	NA	96186766	96174603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015
ES.33633.1	chr8	+	169	1	Intergenic	novelGene_27366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGGCCAAGGTTGTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	96237397	96237566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96237400_96237600
ES.33634.1	chr8	+	163	1	Intergenic	novelGene_27367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	96259793	96259956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96259800_96260000
ES.33635.1	chr8	+	1281	9	FSM	ENSMUSG00000036598.5	ENSMUST00000041569.5	1288	9	5	2	5	-2	multi-exon	FALSE	canonical	2	7	junction_1	2.77263412660235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGGTCCTCTCACTTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	96260717	96285516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96260901_96263092_96263220_96264719_96264882_96267426_96267583_96269249_96269331_96272521_96272678_96277824_96277933_96283818_96283975_96285364
ES.33635.2	chr8	+	3663	3	NIC	ENSMUSG00000036598.5	novel	1288	9	NA	NA	16	-17082	intron_retention	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTATGATTGGTTGAA	NA	False	NA	NA	False	NA	NA	NA	96260728	96268436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96263220_96264719_96264882_96267426
ES.33636.1	chr8	-	150	1	Intergenic	novelGene_27368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	96283186	96283036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96283000_96283200
ES.33637.1	chr8	+	261	1	Intergenic	novelGene_27369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGGCTATAACTATGA	NA	False	NA	NA	False	AGTAAA	-6	NA	96325206	96325467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96325200_96325500
ES.33638.1	chr8	-	235	1	Intergenic	novelGene_27370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	96325699	96325464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96325500_96325700
ES.33639.1	chr8	+	160	1	Intergenic	novelGene_27371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTAAAAATCTGCC	NA	False	NA	NA	False	NA	NA	NA	96329762	96329922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96329800_96329900
ES.3364.1	chr10	+	4444	1	Intergenic	novelGene_2594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGATTCTGGTCTGTGG	4496	False	NA	NA	False	NA	NA	NA	80812183	80816627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80812200_80816600
ES.33640.1	chr8	-	1018	1	Intergenic	novelGene_27372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTAGGCCTTGTGTTA	NA	False	NA	NA	False	NA	NA	NA	96359672	96358654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96358700_96359700
ES.33641.1	chr8	+	6822	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	14	-4317	14	4317	multi-exon	FALSE	canonical	3	97	junction_2	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGACTGAAATTCTTTCC	NA	False	NA	NA	False	AATAAA	-19	NA	96360094	96376005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437_96364672_96369734
ES.33641.10	chr8	+	530	1	Intergenic	novelGene_27373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	96363512	96364042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96363500_96364000
ES.33641.2	chr8	+	2481	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	40	-2	40	2	multi-exon	FALSE	canonical	3	97	junction_2	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGTCACTAACTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96360120	96371690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437_96364672_96369734
ES.33641.3	chr8	+	7527	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	-46	-6827	-46	0	multi-exon	FALSE	canonical	3	101	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	False	NA	NA	False	AATAAA	-14	NA	96360135	96371688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437
ES.33641.4	chr8	+	3584	1	NIC	ENSMUSG00000031669.11	novel	2519	3	NA	NA	-44	-1140	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATTATACACAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	96360137	96363721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96360100_96363700
ES.33641.5	chr8	+	6977	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	-43	-6280	-43	-547	multi-exon	FALSE	canonical	3	101	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTTCTTTAAAGAAAG	NA	False	NA	17	True	AATAAA	-17	NA	96360138	96371141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437
ES.33641.6	chr8	+	1894	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	75	550	-26	-550	multi-exon	FALSE	canonical	3	97	junction_2	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTTTTCTTTAAAGA	NA	False	NA	14	True	AATAAA	-14	NA	96360155	96371138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437_96364672_96369734
ES.33641.7	chr8	+	2214	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	76	229	-25	-229	multi-exon	FALSE	canonical	3	97	junction_2	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTGGATTGTCTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	96360156	96371459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96360412_96364437_96364672_96369734
ES.33641.8	chr8	+	3289	2	NNC	ENSMUSG00000031669.11	novel	654	2	NA	NA	-6	-1140	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATTATACACAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	96360175	96363721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96361516_96361772
ES.33641.9	chr8	+	2283	4	NNC	ENSMUSG00000031669.11	novel	2519	3	NA	NA	110	12178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.377913278939	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	AATAAA	-10	NA	96360291	96383866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96360412_96364437_96364672_96379523_96379710_96382123
ES.33642.1	chr8	-	159	1	Intergenic	novelGene_27374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	96381882	96381723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96381700_96381900
ES.33643.1	chr8	+	3001	16	NIC	ENSMUSG00000036564.18	novel	713	11	NA	NA	-125	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.57023272081271	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	9	True	AATAAA	-14	NA	96403482	96441584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96403721_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ES.33643.2	chr8	+	3121	16	NIC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	-60	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.57023272081271	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	8	True	AATAAA	-13	NA	96404652	96441583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96405012_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ES.33643.3	chr8	+	3067	15	NIC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.82603787943865	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTCGTGTTTCCTA	NA	False	NA	7	True	AATAAA	-12	NA	96404657	96441582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96405012_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437561_96437598_96437720_96437773_96439805
ES.33643.4	chr8	+	210	1	Intergenic	novelGene_27375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTGTACAATTAAAAAA	NA	False	NA	NA	False	ACTAAA	-9	NA	96409124	96409334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96409100_96409300
ES.33643.5	chr8	+	2818	1	NIC	ENSMUSG00000036564.18	novel	1029	11	NA	NA	-7453	-10743	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAGTGCAGCCTCCAC	NA	False	NA	NA	False	NA	NA	NA	96422211	96425029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96422200_96425000
ES.33643.6	chr8	+	2847	15	NIC	ENSMUSG00000036564.18	novel	3101	17	NA	NA	-5929	2	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	7.54476436926662	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTCGTGTTTCCTA	NA	False	NA	7	True	AATAAA	-12	NA	96423735	96441582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ES.33643.7	chr8	+	2811	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	-74	1	-48	-1	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGTCGTGTTTCCTAT	NA	False	NA	8	True	AATAAA	-13	NA	96429616	96441583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ES.33643.8	chr8	+	3239	10	NIC	ENSMUSG00000036564.18	novel	2738	14	NA	NA	22	2	intron_retention	FALSE	canonical	3	13	junction_3	6.04509800388242	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGTCGTGTTTCCTA	NA	False	NA	7	True	AATAAA	-12	NA	96433223	96441582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96437340_96437561_96437598_96437720_96437773_96439805
ES.33644.1	chr8	+	3200	1	Genic_Genomic	ENSMUSG00000031671.12	novel	NA	NA	NA	NA	-74	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442434	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_96442400_96445600
ES.33644.10	chr8	+	2749	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	282	junction_1	59.695523748063	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAGAAGTTCAAACTTT	NA	False	NA	30	True	AATAAA	-17	NA	96442539	96445629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443430_96443548_96444964_96445103
ES.33644.11	chr8	+	3592	4	NNC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-3	4845	intron_retention	FALSE	canonical	0	0	junction_3	200.361894802602	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGAAAGAAGTTGTTG	NA	False	NA	NA	False	AATAAA	-29	NA	96442539	96450483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96442592_96444820_96444964_96445103_96448181_96450163
ES.33644.12	chr8	+	1442	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-13	combination_of_known_junctions	TRUE	canonical	3	24	junction_2	169.084462785779	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTTTGAGAAGTTCAAA	NA	False	NA	26	True	AATAAA	-13	NA	96442540	96445625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443123_96443234_96443430_96444820_96444964_96445103
ES.33644.13	chr8	+	2565	3	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	22	junction_1	203	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442540	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442592_96442980_96444964_96445103
ES.33644.14	chr8	+	1478	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	-5	intron_retention	FALSE	canonical	3	24	junction_2	167.031600469958	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442542	96445633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443430_96444820_96444964_96445103
ES.33644.15	chr8	+	1053	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	177.171350674989	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442542	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96444820_96444964_96445103
ES.33644.16	chr8	+	1367	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	146.993834904733	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442542	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96444820_96444964_96445103
ES.33644.17	chr8	+	1359	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTTCAAACTTTCTT	NA	False	NA	33	True	AATAAA	-20	NA	96442543	96445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ES.33644.18	chr8	+	1571	7	NNC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.076971287757	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442543	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444575_96444730_96444820_96444964_96445103
ES.33644.19	chr8	+	2945	2	NIC	ENSMUSG00000031671.12	novel	774	4	NA	NA	2	-9	intron_retention	FALSE	canonical	3	428	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAGAAGTTCAAACTTT	NA	False	NA	30	True	AATAAA	-17	NA	96442544	96445629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96444964_96445103
ES.33644.2	chr8	+	1724	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	-21	4	-21	-4	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442487	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ES.33644.20	chr8	+	2165	4	NNC	ENSMUSG00000031671.12	novel	763	4	NA	NA	5	6002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	138.675480489122	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAATTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	96442547	96451640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96442899_96442980_96443123_96443234_96443430_96450163
ES.33644.21	chr8	+	1569	6	NNC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.033698520469	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442552	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96442899_96442942_96443123_96443234_96443430_96444548_96444730_96444820_96444964_96445103
ES.33644.22	chr8	+	2845	3	NIC	ENSMUSG00000031671.12	novel	774	4	NA	NA	11	-9	intron_retention	FALSE	canonical	3	366	junction_1	31	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAGAAGTTCAAACTTT	NA	False	NA	30	True	AATAAA	-17	NA	96442553	96445629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96444730_96444820_96444964_96445103
ES.33644.23	chr8	+	1762	6	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	18	-5	intron_retention	FALSE	canonical	3	236	junction_3	67.7477674908923	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCAAACTTTCTTT	NA	False	NA	34	True	AATAAA	-21	NA	96442560	96445633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ES.33644.24	chr8	+	2186	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	190	-11	intron_retention	FALSE	canonical	3	305	junction_1	43.5280082245903	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442979	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
ES.33644.25	chr8	+	3423	1	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAGATAGCGCATGC	NA	False	NA	NA	False	NA	NA	NA	96450170	96453593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96450200_96453600
ES.33644.26	chr8	+	5786	7	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGAGGGATTTCAT	NA	False	NA	NA	False	NA	NA	NA	96450170	96461806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96452816_96454209_96454307_96455236_96455364_96455714_96457290_96459719_96459955_96460607_96460777_96460868
ES.33644.27	chr8	+	5998	1	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGAGGGATTTCATT	2840	False	NA	NA	False	NA	NA	NA	96455809	96461807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96455800_96461800
ES.33644.3	chr8	+	1618	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	15	-11	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	127.266998428064	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442523	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444548_96444730_96444820_96444964_96445103
ES.33644.4	chr8	+	1637	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-14	-11	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	159.891369373084	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442528	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443123_96443234_96443430_96444548_96444730_96444820_96444964_96445103
ES.33644.5	chr8	+	2557	6	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	282	junction_1	51.2312404690732	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442533	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
ES.33644.6	chr8	+	1741	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-8	-13	intron_retention	FALSE	canonical	2	11	junction_1	183.714149941938	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTTTGAGAAGTTCAAA	NA	False	NA	26	True	AATAAA	-13	NA	96442534	96445625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443430_96444548_96444730_96444820_96444964_96445103
ES.33644.7	chr8	+	2841	3	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	362	junction_1	33	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442534	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443430_96443548_96444964_96445103
ES.33644.8	chr8	+	2739	4	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-4	-11	intron_retention	FALSE	canonical	3	362	junction_1	30.2140511829991	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGAGAAGTTCAAACT	NA	False	NA	28	True	AATAAA	-15	NA	96442538	96445627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96443430_96443548_96444730_96444820_96444964_96445103
ES.33644.9	chr8	+	2664	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	282	junction_1	51.8338692362436	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	False	NA	35	True	AATAAA	-22	NA	96442538	96445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96442899_96442980_96443430_96443548_96444730_96444820_96444964_96445103
ES.33645.1	chr8	+	1816	13	NNC	ENSMUSG00000074136.10	novel	2803	4	NA	NA	-43712	-2768	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCGCCCGAGGTCGC	NA	False	NA	NA	False	NA	NA	NA	96489659	96534061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_96489858_96491083_96491213_96491607_96491779_96496128_96496242_96496373_96496499_96497169_96497339_96498598_96498803_96500059_96500113_96500196_96500268_96501257_96501357_96501906_96502015_96515257_96515535_96533962
ES.33645.10	chr8	+	2864	1	FSM	ENSMUSG00000074136.10	ENSMUST00000098472.2	3229	1	-247	612	-18	-612	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-24	NA	96533353	96536217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96533400_96536200
ES.33645.11	chr8	+	3604	4	Fusion	ENSMUSG00000074136.10_ENSMUSG00000061104.6	novel	2803	4	NA	NA	-8	-1	multi-exon	FALSE	canonical	1	3	junction_2	4.18993502999218	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-30	NA	96533363	96552761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_96535809_96536858_96536926_96548050_96548386_96552004
ES.33645.12	chr8	+	2898	4	FSM	ENSMUSG00000074136.10	ENSMUST00000145562.8	2803	4	-67	-28	19	28	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGAGATGCTTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	96533390	96548384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96535809_96536858_96536926_96542995_96543075_96548050
ES.33645.13	chr8	+	2600	3	ISM	ENSMUSG00000074136.10	ENSMUST00000145562.8	2803	4	-64	5243	22	-5212	5prime_fragment	FALSE	canonical	1	1	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGTCACGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	96533393	96543113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_96535809_96536858_96536926_96542995
ES.33645.14	chr8	+	2886	2	ISM	ENSMUSG00000074136.10	ENSMUST00000145562.8	2803	4	-63	11026	23	2	5prime_fragment	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTTTGCCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	96533394	96537330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_96535809_96536858
ES.33645.15	chr8	+	2555	3	FSM	ENSMUSG00000074136.10	ENSMUST00000132616.2	490	3	-2008	-57	52	26	multi-exon	FALSE	canonical	2	3	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGAGATGCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	96533652	96548382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96535809_96536858_96536926_96548050
ES.33645.16	chr8	+	808	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	8	-27	8	27	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTCACAAAGAATCAATT	NA	False	NA	NA	False	AATACA	-40	NA	96551981	96552789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96552000_96552800
ES.33645.18	chr8	+	601	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	10	178	10	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGCCATTAAGCCTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	96551983	96552584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_96552000_96552600
ES.33645.2	chr8	+	2408	1	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96498960	96501368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96499000_96501400
ES.33645.3	chr8	+	2580	1	Antisense	novelGene_ENSMUSG00000110556.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	NA	False	NA	NA	False	AATACA	-16	NA	96502487	96505067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96502500_96505100
ES.33645.4	chr8	+	184	1	Intergenic	novelGene_27376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAGTAATAC	NA	False	NA	NA	False	NA	NA	NA	96518110	96518294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96518100_96518300
ES.33645.5	chr8	+	155	2	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	328	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATGAATAAA	NA	False	NA	NA	False	NA	NA	NA	96518111	96520835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96518161_96520729
ES.33645.6	chr8	+	188	1	Intergenic	novelGene_27377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96520678	96520866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96520700_96520900
ES.33645.7	chr8	+	176	1	Intergenic	novelGene_27380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGGGGGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	96523693	96523869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96523700_96523900
ES.33645.8	chr8	+	162	1	Intergenic	novelGene_27381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	96523883	96524045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96523900_96524000
ES.33645.9	chr8	+	2644	2	NIC	ENSMUSG00000074136.10	novel	2803	4	NA	NA	-30	-5153	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCATGAGCCCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	96533341	96543172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_96535809_96542995
ES.33646.10	chr8	-	8075	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	321.297864462765	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCACTGTGCCTTTCTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	96534055	96446253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467608_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.100	chr8	-	7098	35	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-624	10	intron_retention	FALSE	canonical	0	0	junction_30	335.53861570579	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96488683	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481612_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130
ES.33646.101	chr8	-	6799	14	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	314	10	intron_retention	FALSE	canonical	3	1421	junction_5	183.834566741389	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96464850	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881
ES.33646.102	chr8	-	8094	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	10	intron_retention	FALSE	canonical	3	306	junction_10	287.249830929359	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534073	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.103	chr8	-	9734	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	10	intron_retention	FALSE	canonical	3	674	junction_29	249.711504618334	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534061	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.104	chr8	-	7591	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_48	338.893697112419	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534072	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.105	chr8	-	8059	41	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-5991	10	intron_retention	FALSE	canonical	2	3	junction_16	371.338390151086	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96498665	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598
ES.33646.109	chr8	-	12506	46	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	10	intron_retention	FALSE	canonical	3	674	junction_27	232.16195496535	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534072	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.11	chr8	-	9553	52	Fusion	ENSMUSG00000036550.17_ENSMUSG00000110489.2	novel	8390	49	NA	NA	-5	5	multi-exon	FALSE	canonical	0	0	junction_50	376.878978859106	1793	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCACTGTGCCTTTCTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	96544324	96446253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960_96535388_96539051_96539129_96544253
ES.33646.110	chr8	-	5739	36	NNC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	51	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	424.928732560064	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96488008	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455236_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479419_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950
ES.33646.111	chr8	-	7626	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-4	10	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_46	321.932666759811	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534065	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501935_96502015_96515257_96515533_96533960
ES.33646.113	chr8	-	4308	27	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	455.971115624689	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534022	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471280_96471570_96471682_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.114	chr8	-	9122	51	Fusion	ENSMUSG00000036550.17_ENSMUSG00000110489.2	novel	8390	49	NA	NA	-1	10	multi-exon	FALSE	canonical	0	0	junction_49	395.952803248064	1793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96544307	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960_96535388_96539051_96539129_96544253
ES.33646.116	chr8	-	7848	46	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	-12	10	intron_retention	FALSE	canonical	0	0	junction_44	360.201301743591	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534073	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96515257_96515533_96533960
ES.33646.12	chr8	-	7885	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	5	5	combination_of_known_splicesites	FALSE	canonical	1	14	junction_11	324.670934179432	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCACTGTGCCTTTCTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	96534054	96446253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.121	chr8	-	5891	37	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1732	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	412.922159585246	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96489791	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459812_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467355_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617
ES.33646.122	chr8	-	4189	25	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-6014	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	371.745206107475	1696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96472824	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472316_96472501
ES.33646.123	chr8	-	7686	49	FSM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	-10	688	-10	10	multi-exon	FALSE	canonical	3	77	junction_46	316.132422148272	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534102	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.124	chr8	-	7541	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	367.881088460277	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534058	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462883_96463074_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.126	chr8	-	9133	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-649	10	intron_retention	FALSE	canonical	3	469	junction_29	260.672197534907	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534741	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.128	chr8	-	7496	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	352.99544033363	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534060	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.132	chr8	-	7663	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_40	322.055603997155	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTTCTTGGGTTTGTGT	NA	False	NA	-9	True	AATATA	-22	NA	96534060	96446774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496254_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.133	chr8	-	7626	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_44	338.977782555099	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACTTCTTGGGTTTGTGT	NA	False	NA	-9	True	AATATA	-22	NA	96534060	96446774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500080_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.135	chr8	-	5489	15	ISM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	68120	690	477	8	3prime_fragment	FALSE	canonical	3	1077	junction_10	232.038053265548	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96465972	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881
ES.33646.137	chr8	-	7657	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	321.368093296284	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534072	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462450_96462877_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.138	chr8	-	7280	47	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	396.054799916453	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534072	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467567_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.14	chr8	-	8171	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	335.91658397419	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCCACTGTGCCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	96534040	96446257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447142_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.141	chr8	-	7654	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	312.250432984977	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534058	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479660_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.146	chr8	-	7553	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-4	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	384.66013710099	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534065	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457112_96457237_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496254_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.147	chr8	-	8964	43	NNC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-11	8	intron_retention	FALSE	canonical	0	0	junction_21	468.046660391734	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534072	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96462313_96462457_96462881_96463074_96466435_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472396_96474875_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.149	chr8	-	6006	37	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1766	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	387.363415793311	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96489825	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460949_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617
ES.33646.15	chr8	-	7648	23	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-6820	1	intron_retention	FALSE	canonical	3	1201	junction_22	208.042693687364	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCCACTGTGCCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	96473630	96446257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600
ES.33646.150	chr8	-	7553	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	8	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_48	318.220917398413	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTCTTGGGTTTGTG	NA	False	NA	-10	True	AATATA	-21	NA	96534072	96446775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.151	chr8	-	3346	20	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	412.453539732263	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAACTTCTTGGGTTT	NA	False	NA	-13	True	AATATA	-18	NA	96534056	96446778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96533960
ES.33646.153	chr8	-	7639	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	312.40140666919	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAACTTCTTGGGTTT	NA	False	NA	-13	True	AATATA	-18	NA	96534057	96446778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501339_96501906_96502015_96515257_96515533_96533960
ES.33646.155	chr8	-	4388	7	ISM	ENSMUSG00000036550.17	ENSMUST00000212302.2	3809	8	65	521	65	4	intron_retention	FALSE	canonical	3	1421	junction_3	182.206308586967	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAACTTCTTGGGTT	NA	False	NA	-14	True	AATATA	-17	NA	96457887	96446779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711
ES.33646.156	chr8	-	7718	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	359.000210566798	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAACTTCTTGGGTT	NA	False	NA	-14	True	AATATA	-17	NA	96534057	96446779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96456117_96456180_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.158	chr8	-	8070	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	4	intron_retention	FALSE	canonical	3	469	junction_30	260.060739153166	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAACTTCTTGGGTT	NA	False	NA	-14	True	AATATA	-17	NA	96534091	96446779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.159	chr8	-	8005	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	4	intron_retention	FALSE	canonical	3	306	junction_10	298.758405538717	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAACTTCTTGGGTT	NA	False	NA	-14	True	AATATA	-17	NA	96534005	96446779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.161	chr8	-	7732	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	395.253970198826	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGAAACTTCTTGGG	NA	False	NA	-16	True	AATATA	-15	NA	96534055	96446781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96488694_96488769_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.162	chr8	-	9243	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-14	1	intron_retention	FALSE	canonical	0	0	junction_20	346.915785523461	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGAAACTTCTTGG	NA	False	NA	-17	True	AATATA	-14	NA	96534075	96446782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470836_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.163	chr8	-	4582	29	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4941	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	405.123809495823	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96479180	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129
ES.33646.165	chr8	-	7784	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	361.976606596958	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483763_96483881_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.166	chr8	-	5721	30	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2433	0	intron_retention	FALSE	canonical	2	2	junction_21	373.122473859999	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96481688	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96468706_96469731_96469863_96470840_96471019_96471190_96471280_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592
ES.33646.172	chr8	-	4595	29	NIC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	4857	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_15	404.142533643763	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96479264	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463022_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129
ES.33646.173	chr8	-	8124	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_36	365.713875712816	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534060	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96488694_96488769_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.174	chr8	-	7642	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	336.18428144955	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448155_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.176	chr8	-	8458	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_25	318.111725567118	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534068	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.177	chr8	-	7609	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	338.871595642558	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534107	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467608_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.178	chr8	-	7739	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	392.501788926756	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483585_96483676_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.179	chr8	-	7502	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	320.351431915881	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534065	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498660_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.180	chr8	-	5624	35	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1180	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	507.082427456616	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96486879	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96474982_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483763_96483881_96483969_96484121_96486726
ES.33646.181	chr8	-	7657	45	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	325.054734742493	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534695	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96470872_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.182	chr8	-	7685	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	315.966528642232	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534103	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.183	chr8	-	6922	37	NNC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	989	0	intron_retention	FALSE	non_canonical	0	0	junction_9	359.254161380402	1726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96491685	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457045_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084
ES.33646.184	chr8	-	7652	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	376.472976910362	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487968_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.189	chr8	-	7772	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_24	342.145304983456	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534093	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473537_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.19	chr8	-	5300	29	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4363	1	combination_of_known_junctions	FALSE	canonical	1	17	junction_12	351.514208134477	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTCCACTGTGCCTTT	NA	False	NA	-5	True	ATTAAA	-14	NA	96479758	96446257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653
ES.33646.190	chr8	-	3947	25	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	372.797830227353	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534057	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96515425_96515533_96533960
ES.33646.192	chr8	-	9750	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	18697	0	intron_retention	FALSE	canonical	3	469	junction_29	260.075288103352	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96515312	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257
ES.33646.196	chr8	-	7627	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	297.287230608109	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534055	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481615_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.199	chr8	-	7544	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_34	313.951882488195	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534072	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.2	chr8	-	8884	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	312.28245761383	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTGCTGACATCAATC	NA	False	NA	NA	False	AGTAAA	-14	NA	96534073	96445562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486731_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.20	chr8	-	8198	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	296.058006674321	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTCCACTGTGCCTT	NA	False	NA	-6	True	ATTAAA	-13	NA	96534072	96446258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.200	chr8	-	7492	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	385.212912454527	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534073	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467608_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.204	chr8	-	8044	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	0	intron_retention	FALSE	canonical	3	77	junction_45	308.532662456709	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534060	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.207	chr8	-	7593	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_39	320.106123895741	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534070	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491722_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.209	chr8	-	7203	40	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	-3755	0	intron_retention	FALSE	canonical	3	469	junction_29	274.490684895999	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96496429	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371
ES.33646.210	chr8	-	7622	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	437.28167121735	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534055	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489853_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496493_96497165_96497339_96498598_96498803_96500059_96500115_96500198_96500266_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.212	chr8	-	7301	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	318.769574438813	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534078	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.215	chr8	-	7637	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	359.568949475735	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534057	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455246_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533971
ES.33646.216	chr8	-	7623	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_9	307.249694167418	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534061	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455843_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.218	chr8	-	7673	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-602	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_48	312.388457176451	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534694	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96534576
ES.33646.219	chr8	-	9630	46	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-5	0	intron_retention	FALSE	canonical	3	469	junction_28	265.905905570531	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534029	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.220	chr8	-	7629	49	Fusion	ENSMUSG00000036550.17_ENSMUSG00000110489.2	novel	8390	49	NA	NA	-8	0	multi-exon	FALSE	canonical	0	0	junction_48	312.388457176451	1793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96544327	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96544253
ES.33646.221	chr8	-	7650	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	306.9076604876	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534073	96446783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481722_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.225	chr8	-	5587	36	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	499.91444655816	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTGAAACTTCTT	NA	False	NA	-19	True	AATATA	-12	NA	96534072	96446784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483585_96483676_96483763_96483881_96515512_96515533_96533960
ES.33646.226	chr8	-	7668	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	297.287230608109	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTGTCTGAAACTTC	NA	False	NA	-21	True	AATATA	-10	NA	96534058	96446786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479797_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.228	chr8	-	8339	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_39	400.600094222621	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTGTCTGAAACTT	NA	False	NA	-22	True	AATATA	-9	NA	96534057	96446787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471280_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496370_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.229	chr8	-	2918	18	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1646	-4	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_7	549.558054588705	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTGTCTGAAACTT	NA	False	NA	-22	True	AATATA	-9	NA	96468456	96446787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408
ES.33646.231	chr8	-	7756	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	407.210260903082	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTGTCTGAAACTT	NA	False	NA	-22	True	AATATA	-9	NA	96534072	96446787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491431_96491507_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.233	chr8	-	8757	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	-4	intron_retention	FALSE	canonical	0	0	junction_36	372.114934760481	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTGTCTGAAACTT	NA	False	NA	-22	True	AATATA	-9	NA	96534055	96446787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488769_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.241	chr8	-	3375	11	NNC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	323	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	543.514020058361	1690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96459041	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96457396
ES.33646.243	chr8	-	7522	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	1	17	junction_12	350.967231068427	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534060	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.244	chr8	-	7550	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_45	315.068611525032	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534060	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501906_96502015_96515257_96515533_96533960
ES.33646.245	chr8	-	7833	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	674	junction_29	246.757417675555	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534072	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.246	chr8	-	7511	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	295.649750568671	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534057	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.250	chr8	-	7678	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_16	310.812150194186	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534073	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466572_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.253	chr8	-	8951	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-31	-6	intron_retention	FALSE	canonical	2	13	junction_47	338.870179071409	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534123	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.255	chr8	-	4077	15	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	592	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	471.819345616476	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96464572	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881
ES.33646.258	chr8	-	7655	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_36	309.213545833754	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534072	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.259	chr8	-	7600	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	426.645472699524	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTTTTGTCTGAAAC	NA	False	NA	-24	True	AATATA	-7	NA	96534123	96446789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472022_96472084_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.261	chr8	-	6684	42	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	420.625216639813	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAACTTTTGTCTGAAA	NA	False	NA	-25	True	AATATA	-6	NA	96534072	96446790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479419_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96515425_96515533_96533960
ES.33646.267	chr8	-	7552	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	321.297864462765	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534072	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467608_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.268	chr8	-	7623	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	365.610047177621	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534073	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471280_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96474982_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.269	chr8	-	3979	25	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-6844	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	511.909970315419	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96473654	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600
ES.33646.272	chr8	-	7128	45	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	331.445029908791	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534055	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.277	chr8	-	7859	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-10	-10	intron_retention	FALSE	non_canonical	0	0	junction_7	308.936048590328	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534071	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454309_96455207_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.278	chr8	-	7348	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	18543	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	318.013108152041	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96515466	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257
ES.33646.279	chr8	-	8097	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-31	-10	intron_retention	FALSE	canonical	2	36	junction_36	312.116213223237	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534123	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.28	chr8	-	8152	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	-1	at_least_one_novel_splicesite	TRUE	canonical	2	36	junction_36	346.676015874532	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGAGTCCACTGTGCCT	NA	False	NA	-7	True	ATTAAA	-12	NA	96534057	96446259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.287	chr8	-	7573	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	386.760651630056	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534055	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457038_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467608_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.288	chr8	-	8172	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-603	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	320.539047256293	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534695	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459812_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.289	chr8	-	7786	48	NIC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-1	-10	intron_retention	FALSE	canonical	1	11	junction_15	345.916724462062	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534060	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463022_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.29	chr8	-	8042	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	295.649750568671	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGAGTCCACTGTGCCT	NA	False	NA	-7	True	ATTAAA	-12	NA	96534058	96446259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.291	chr8	-	7531	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	377.420634032123	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534058	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478450_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.292	chr8	-	3510	13	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	231	-10	intron_retention	FALSE	canonical	3	1077	junction_8	224.694283045505	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96463126	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881
ES.33646.293	chr8	-	4627	28	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4705	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	356.42035262322	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96479416	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96475471_96475703_96478368_96478448_96479129
ES.33646.295	chr8	-	7671	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	389.764182622718	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAACTTTTGTCTG	NA	False	NA	-28	True	AATATA	-3	NA	96534060	96446793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473591_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.299	chr8	-	8333	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-603	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	392.772094690225	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAGAAAACTTTTGT	NA	False	NA	-31	True	NA	NA	NA	96534695	96446796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96488694_96488769_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.3	chr8	-	8785	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	445	combination_of_known_junctions	FALSE	canonical	3	469	junction_30	257.98436106779	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGAACTCAGCCCATG	NA	False	NA	NA	False	AAGAAA	-14	NA	96534055	96445633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.30	chr8	-	8376	51	NNC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	442.250383380275	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGAGTCCACTGTGCC	NA	False	NA	-8	True	ATTAAA	-11	NA	96534072	96446260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483585_96483676_96483763_96483881_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.300	chr8	-	7650	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	311.172055585143	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAAGAGAAAACTTTT	NA	False	NA	-33	True	NA	NA	NA	96534073	96446798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462450_96462877_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.301	chr8	-	6561	41	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-4606	-17	combination_of_known_junctions	FALSE	canonical	1	17	junction_12	334.291081992924	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATGAAAGAGAAAACTT	NA	False	NA	-35	True	NA	NA	NA	96497280	96446800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169
ES.33646.302	chr8	-	7516	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	17	-1027	combination_of_known_junctions	FALSE	canonical	3	306	junction_8	270.212735627457	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCAGTAATGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	96534042	96447810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.303	chr8	-	7432	48	NNC	ENSMUSG00000036550.17	novel	2469	17	NA	NA	2	-1027	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	296.401658161043	1730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCAGTAATGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	96534057	96447810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96448056_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.304	chr8	-	7479	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-6	-1028	combination_of_known_junctions	FALSE	canonical	3	313	junction_29	265.867098001279	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGCAGTAATGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	96534030	96447811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.307	chr8	-	7505	47	NIC	ENSMUSG00000036550.17	novel	8152	48	NA	NA	-11	-1029	combination_of_known_junctions	FALSE	canonical	3	313	junction_29	278.201648759314	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGGCAGTAATGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	96534072	96447812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.308	chr8	-	7809	39	ISM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	-1	11782	-1	-42	5prime_fragment	FALSE	canonical	3	674	junction_20	166.684401641823	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACTTTATGTCCGTCCG	NA	False	NA	NA	False	ATTAAA	-19	NA	96534091	96457860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.309	chr8	-	6346	29	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	42319	11787	984	-54	internal_fragment	FALSE	canonical	3	469	junction_20	207.915734869015	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTCCAAGATGACTT	NA	False	NA	NA	False	ATTAAA	-7	NA	96491690	96457872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607
ES.33646.31	chr8	-	8196	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	342.987545833988	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGAGTCCACTGTGCC	NA	False	NA	-8	True	ATTAAA	-11	NA	96534061	96446260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496491_96497165_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.310	chr8	-	5416	37	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-51	14869	-1	-14	5prime_fragment	FALSE	canonical	3	469	junction_18	182.413830494169	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAATATAATGTGGAG	NA	False	NA	NA	False	AAGAAA	-39	NA	96534060	96460954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.311	chr8	-	4763	31	NIC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-12	1439	combination_of_known_junctions	FALSE	canonical	3	313	junction_13	217.478846991814	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGGGCCTGTGCTGT	NA	False	NA	NA	False	TATAAA	-19	NA	96534073	96468362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.312	chr8	-	4751	31	NNC	ENSMUSG00000036550.17	novel	2469	17	NA	NA	151	955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	399.043049752224	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACAGGTTATACTGACT	NA	False	NA	NA	False	ATTAAA	-13	NA	96533858	96468846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96469134_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478364_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533693
ES.33646.313	chr8	-	4709	25	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-64	26599	-12	1061	5prime_fragment	FALSE	canonical	3	469	junction_6	180.764964034025	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTGCGTTATCTTTT	NA	False	NA	NA	False	NA	NA	NA	96534073	96472684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.315	chr8	-	4391	25	ISM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	-91	26276	-23	686	5prime_fragment	FALSE	canonical	3	674	junction_6	148.112517054884	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGCTGGTTGAATGT	NA	False	NA	-2	True	AATAAA	-18	NA	96534115	96473059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.317	chr8	-	4334	25	NNC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-12	685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	325.409901764938	1456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTCTGCTGGTTGAATG	NA	False	NA	-3	True	AATAAA	-17	NA	96534073	96473060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502004_96515257_96515533_96533960
ES.33646.318	chr8	-	4986	25	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-717	26975	-634	685	5prime_fragment	FALSE	canonical	3	469	junction_6	180.764964034025	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTCTGCTGGTTGAATG	NA	False	NA	-3	True	AATAAA	-17	NA	96534726	96473060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.320	chr8	-	4237	25	ISM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	-81	26420	-13	542	5prime_fragment	FALSE	canonical	3	674	junction_6	148.112517054884	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGACTTGTGTCTATGC	NA	False	NA	NA	False	NA	NA	NA	96534105	96473203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.321	chr8	-	3826	25	ISM	ENSMUSG00000036550.17	ENSMUST00000213006.2	7479	48	-52	26802	14	160	5prime_fragment	FALSE	canonical	3	674	junction_6	148.112517054884	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCCTTCAGCTTTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	96534076	96473585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.322	chr8	-	3756	22	NIC	ENSMUSG00000036550.17	novel	8152	48	NA	NA	-12	3743	combination_of_known_junctions	FALSE	canonical	3	313	junction_4	258.046041700291	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGTTTGAGCTGTGGT	NA	False	NA	NA	False	AATAAA	-25	NA	96534073	96477850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.323	chr8	-	150	1	Intergenic	novelGene_27378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1065	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	96521430	96521280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96521300_96521400
ES.33646.324	chr8	-	177	1	Intergenic	novelGene_27379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1070	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAACTACAAAAA	NA	False	NA	NA	False	NA	NA	NA	96523148	96522971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96523000_96523100
ES.33646.325	chr8	-	442	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	-100	-4	-87	4	multi-exon	FALSE	canonical	0	0	junction_1	187	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTACTGGTATGAGAG	NA	False	NA	0	True	TTTAAA	-5	NA	96544406	96535175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96535388_96539051_96539129_96544253
ES.33646.327	chr8	-	309	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212957.2	153	3	-5	-151	-5	-10	multi-exon	FALSE	canonical	3	213	junction_1	80.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTTAAAGTTCAAATAG	NA	False	NA	-14	True	NA	NA	NA	96544324	96535189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96535388_96539088_96539129_96544253
ES.33646.328	chr8	-	4009	2	NIC	ENSMUSG00000110489.2	novel	338	3	NA	NA	-5	-11	intron_retention	FALSE	canonical	3	374	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCTTTAAAGTTCAAATA	NA	False	NA	-15	True	NA	NA	NA	96544324	96535190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96539129_96544253
ES.33646.330	chr8	-	336	1	Intergenic	novelGene_27382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96539953	96539617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96539600_96540000
ES.33646.331	chr8	-	2549	1	Antisense	novelGene_ENSMUSG00000074136.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAAATTATCACATCCA	NA	False	NA	NA	False	NA	NA	NA	96544060	96541511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_96541500_96544100
ES.33646.34	chr8	-	9193	51	Fusion	ENSMUSG00000036550.17_ENSMUSG00000110489.2	novel	8390	49	NA	NA	-8	75	multi-exon	FALSE	canonical	0	0	junction_49	343.195804170156	1793	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCTTGTCTCAAGCATA	NA	False	NA	57	True	NA	NA	NA	96544327	96446708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960_96535388_96539051_96539129_96544253
ES.33646.35	chr8	-	8074	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-6	17	intron_retention	FALSE	canonical	3	674	junction_30	246.463724688124	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTTTGTGTAAAGTGTG	NA	False	NA	-1	True	AATATA	-30	NA	96534067	96446766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.36	chr8	-	9636	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	17	intron_retention	FALSE	canonical	3	469	junction_28	260.176576836224	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTTTGTGTAAAGTGTG	NA	False	NA	-1	True	AATATA	-30	NA	96534072	96446766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.39	chr8	-	7658	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	369.699791340919	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTGTGTAAAGTG	NA	False	NA	-3	True	AATATA	-28	NA	96534072	96446768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498812_96500194_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.4	chr8	-	8657	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	300	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	342.988393040372	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGGGTTTTGTCTTGG	NA	False	NA	NA	False	AAGAAA	-32	NA	96534073	96445778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.40	chr8	-	8349	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	-649	690	-647	15	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTGTGTAAAGTG	NA	False	NA	-3	True	AATATA	-28	NA	96534739	96446768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.41	chr8	-	7781	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-31	15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_24	321.149603313368	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTGTGTAAAGTG	NA	False	NA	-3	True	AATATA	-28	NA	96534123	96446768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473537_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.44	chr8	-	9561	46	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	13	intron_retention	FALSE	canonical	3	469	junction_28	259.576270101872	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534057	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.49	chr8	-	8309	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-603	13	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	296.058006674321	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534695	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.5	chr8	-	8689	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	296	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	284.722571476751	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGGGGGTTTTGTC	NA	False	NA	NA	False	AAGAAA	-28	NA	96534072	96445782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.51	chr8	-	7449	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	315.696503751246	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534072	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.54	chr8	-	7490	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	9	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_47	312.237086624714	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534050	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515425_96515533_96533960
ES.33646.55	chr8	-	7560	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	356.136102487229	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534057	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.56	chr8	-	8215	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-625	13	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_48	335.709252490028	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534717	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.57	chr8	-	7776	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	360.424494048389	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534093	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491431_96491507_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.59	chr8	-	9420	46	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	13	intron_retention	FALSE	canonical	3	674	junction_27	250.981228947407	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534057	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471682_96472202_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.6	chr8	-	8858	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-641	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	311.060506797132	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACTGTGCCTTTCTCAG	NA	False	NA	0	True	ATTAAA	-19	NA	96534733	96446252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500110_96500194_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.60	chr8	-	8778	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	13	intron_retention	FALSE	canonical	0	0	junction_36	377.727026640397	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534073	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488769_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.64	chr8	-	5278	33	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	1243	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	452.876232359281	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96486816	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726
ES.33646.65	chr8	-	7407	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	362.607753610873	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534072	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455240_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96533960
ES.33646.68	chr8	-	7731	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	-31	13	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	346.712531396088	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534123	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.69	chr8	-	7711	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-28	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	336.18428144955	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534120	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447392_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.7	chr8	-	8221	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-21	6	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	292.082375622538	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACTGTGCCTTTCTCAG	NA	False	NA	0	True	ATTAAA	-19	NA	96534113	96446252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.70	chr8	-	10589	44	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	13	intron_retention	FALSE	canonical	1	17	junction_12	326.609600685804	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534091	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96462313_96462457_96462881_96463074_96466435_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.71	chr8	-	7716	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-22	13	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	305.67686094301	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534114	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.72	chr8	-	7518	48	FSM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	-51	685	-1	13	multi-exon	FALSE	canonical	3	8	junction_1	306.345213393528	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534060	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.73	chr8	-	7488	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-11	13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_38	349.354539020043	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534072	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491722_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.75	chr8	-	7665	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	14	13	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	362.816049365355	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534045	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ES.33646.76	chr8	-	5737	36	NNC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	39	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	400.452472657047	1725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96488020	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447376_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950
ES.33646.77	chr8	-	8117	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	13	intron_retention	FALSE	canonical	3	10	junction_7	348.90988224796	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534073	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.78	chr8	-	5384	33	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	1219	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	379.419610999402	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96486840	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726
ES.33646.79	chr8	-	7704	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	304.942019050571	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534061	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.8	chr8	-	8248	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	6	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	315.46632081091	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCACTGTGCCTTTCTCAG	NA	False	NA	0	True	ATTAAA	-19	NA	96534104	96446252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.83	chr8	-	7552	50	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	2	13	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_48	355.609966320695	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534057	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515319_96515425_96515533_96533960
ES.33646.84	chr8	-	7703	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	322.26052693779	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534091	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.85	chr8	-	7669	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	17	13	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	312.053730655431	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534042	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467482_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.87	chr8	-	7383	47	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	5	13	combination_of_known_splicesites	FALSE	canonical	1	14	junction_11	314.226280699183	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534054	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.88	chr8	-	7668	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	476.030313504298	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534060	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454308_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460769_96460868_96460978_96462313_96462457_96462883_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484118_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.89	chr8	-	7634	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	4	13	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_46	311.691442865465	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534055	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501935_96502015_96515257_96515533_96533960
ES.33646.9	chr8	-	10551	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-10	5	intron_retention	FALSE	canonical	2	5	junction_38	349.173407935679	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCACTGTGCCTTTCTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	96534071	96446253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491722_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.90	chr8	-	7571	48	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	337.320606381172	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGGGTTTGTGTAAAG	NA	False	NA	-5	True	AATATA	-26	NA	96534092	96446770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.91	chr8	-	7588	47	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	12	intron_retention	FALSE	canonical	0	0	junction_25	379.543861145298	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGGGTTTGTGTAAA	NA	False	NA	-6	True	AATATA	-25	NA	96534061	96446771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.93	chr8	-	7447	48	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_35	346.240312509011	1741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534073	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96489749_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.95	chr8	-	3122	18	NIC	ENSMUSG00000036550.17	novel	7479	48	NA	NA	-3046	10	combination_of_known_splicesites	FALSE	canonical	1	14	junction_11	506.83789372839	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96469856	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731
ES.33646.96	chr8	-	4129	25	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-5929	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	432.381261799763	1696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96472739	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96472501
ES.33646.97	chr8	-	7733	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-1	10	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_16	341.93308654923	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534091	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466572_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.98	chr8	-	7696	49	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-10	10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	315.272963742004	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96534071	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455207_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ES.33646.99	chr8	-	3606	22	NNC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	-4137	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	498.598407420327	1694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTTGGGTTTGTGTA	NA	False	NA	-8	True	AATATA	-23	NA	96470947	96446773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96457396_96457489_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840
ES.33647.1	chr8	-	277	1	Intergenic	novelGene_27383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	96546713	96546436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96546400_96546700
ES.33648.1	chr8	+	1141	1	Antisense	novelGene_ENSMUSG00000036534.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATCTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96575079	96576220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96575100_96576200
ES.33649.1	chr8	+	1946	2	Antisense	novelGene_ENSMUSG00000031672.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCAGGCATAATGG	NA	False	NA	NA	False	NA	NA	NA	96579085	96592446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_96579138_96590552
ES.33649.2	chr8	+	134	1	Intergenic	novelGene_27385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96581379	96581513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96581400_96581500
ES.3365.1	chr10	+	200	1	Intergenic	novelGene_2595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	80825891	80826091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80825900_80826100
ES.3365.10	chr10	+	3301	12	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-39	-340	intron_retention	FALSE	canonical	3	459	junction_3	50.7521932921814	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5503	False	NA	9	True	ATTAAA	-15	NA	80905921	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.100	chr10	+	5007	1	NIC	ENSMUSG00000035011.16	novel	5938	3	NA	NA	9261	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTTGCCTGGTCTCT	NA	False	NA	20	True	CATAAA	-36	NA	80983047	80988054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80983000_80988100
ES.3365.101	chr10	+	855	2	NNC	ENSMUSG00000035011.16	novel	5938	3	NA	NA	10414	-1401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAATTGTGGAATTCA	NA	False	NA	NA	False	GATAAA	-8	NA	80984200	80986655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80984953_80986552
ES.3365.102	chr10	+	3451	6	Antisense	novelGene_ENSMUSG00000004934.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGTACACTGTAG	NA	False	NA	NA	False	NA	NA	NA	80989680	80995525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80990209_80990283_80990415_80991425_80991586_80991666_80991743_80992846_80993361_80993483
ES.3365.103	chr10	+	2910	8	Antisense	novelGene_ENSMUSG00000004934.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTGTACACTGTAGG	NA	False	NA	NA	False	NA	NA	NA	80989871	80995526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80990415_80991425_80991586_80991666_80991743_80992845_80992954_80993062_80993192_80993272_80993361_80993483_80993529_80993765
ES.3365.104	chr10	+	2746	1	Antisense	novelGene_ENSMUSG00000004934.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGGTCTGGCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	80996339	80999085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80996300_80999100
ES.3365.105	chr10	+	205	1	Intergenic	novelGene_2602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCCTTTCAGAATGG	6129	False	NA	NA	False	NA	NA	NA	81006847	81007052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81006800_81007100
ES.3365.106	chr10	+	3563	12	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	-126	-3	-126	3	intron_retention	TRUE	canonical	3	5618	junction_10	508.359767185172	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGCAACTCTGTTTTGTA	2055	False	NA	35	True	AATAAA	-23	NA	81012338	81018335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061
ES.3365.107	chr10	+	3203	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	-102	-12	-102	12	multi-exon	FALSE	canonical	3	5618	junction_10	706.418033369635	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTGTACAGCGCACG	2079	False	NA	44	True	AATAAA	-32	NA	81012362	81018344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.108	chr10	+	2963	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	-1	127	-1	-127	multi-exon	FALSE	canonical	3	5618	junction_10	706.418033369635	6178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGTTCCCCCAGAGG	2180	False	NA	34	True	AATAAA	-31	NA	81012463	81018205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.11	chr10	+	2071	11	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-33	-340	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	169.404368302591	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5509	False	NA	9	True	ATTAAA	-15	NA	80905927	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.110	chr10	+	3738	9	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	4	-1	intron_retention	FALSE	canonical	3	5618	junction_8	519.498180338488	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2185	False	NA	31	True	AATAAA	-19	NA	81012468	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637
ES.3365.111	chr10	+	3497	12	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	7	-1	intron_retention	FALSE	canonical	3	5618	junction_9	683.018313465258	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2188	False	NA	31	True	AATAAA	-19	NA	81012471	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81016992_81017061_81017245_81017326
ES.3365.112	chr10	+	3146	13	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5618	junction_10	724.187068182125	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2193	False	NA	31	True	AATAAA	-19	NA	81012476	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81017245_81017326_81017460_81017722
ES.3365.115	chr10	+	3575	10	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	13	-2	intron_retention	FALSE	canonical	3	5618	junction_9	513.061279520497	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2194	False	NA	30	True	AATAAA	-18	NA	81012477	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637
ES.3365.12	chr10	+	2565	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	68	199	-24	-199	multi-exon	FALSE	canonical	3	459	junction_3	51.2387521532504	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGGGTCACTGTGTCTG	5518	False	NA	NA	False	NA	NA	NA	80905936	80918194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.120	chr10	+	3338	13	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	14	0	14	0	intron_retention	FALSE	canonical	3	5618	junction_10	657.372357698943	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2195	False	NA	32	True	AATAAA	-20	NA	81012478	81018332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326
ES.3365.124	chr10	+	2925	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-148	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	1952.57705300687	6173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTTGGGGTCCATGGC	2196	False	NA	13	True	AATAAA	-10	NA	81012479	81018184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016981_81017051_81017245_81017326_81017460_81017722
ES.3365.127	chr10	+	3347	12	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_8	762.826735307025	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.128	chr10	+	2926	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1968.26742963354	6174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGTCCATGGCCAAGTG	2196	False	NA	19	True	AATAAA	-16	NA	81012479	81018190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015088_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.129	chr10	+	3006	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	9	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	1963.35766017686	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTTTTGTACAGCGC	2196	False	NA	41	True	AATAAA	-29	NA	81012479	81018341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015209_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.13	chr10	+	2441	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-23	-340	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	156.410961536872	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5519	False	NA	9	True	ATTAAA	-15	NA	80905937	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914285_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.130	chr10	+	3040	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1965.5028385337	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015902_81016007_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.131	chr10	+	2998	15	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1898.57666343468	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81014951_81015025_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.135	chr10	+	3148	13	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_9	735.245778067897	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.136	chr10	+	3039	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1968.26742963354	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTGCTCGCAACTCT	2196	False	NA	27	True	AATAAA	-15	NA	81012479	81018327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015209_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.138	chr10	+	3036	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1965.5028385337	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACATGTGCTCGCAACT	2196	False	NA	25	True	AATAAA	-13	NA	81012479	81018325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81016017_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.142	chr10	+	3065	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1960.19076175897	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTGCTCGCAACTCT	2196	False	NA	27	True	AATAAA	-15	NA	81012479	81018327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015635_81015723_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.143	chr10	+	2948	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1969.39417290801	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013621_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.144	chr10	+	3070	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1962.07709949907	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016240_81016395_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.145	chr10	+	3998	7	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	7	intron_retention	FALSE	canonical	3	5618	junction_6	510.426836633376	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTCTGTTTTGTACAGC	2196	False	NA	39	True	AATAAA	-27	NA	81012479	81018339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015286_81015377_81015631_81015715_81016507_81016637
ES.3365.146	chr10	+	3610	11	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_8	712.020428077734	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326
ES.3365.148	chr10	+	2796	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1895.65609319535	6177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAAGTGGAGTTCCCCC	2196	False	NA	29	True	AATAAA	-26	NA	81012479	81018200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017121_81017348_81017460_81017722
ES.3365.149	chr10	+	2958	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3006.63616908572	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014721_81014920_81015082_81015224_81015286_81015421_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.15	chr10	+	2084	12	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-23	-340	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	162.506147372597	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5519	False	NA	9	True	ATTAAA	-15	NA	80905937	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915907_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.150	chr10	+	3229	12	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	3	intron_retention	FALSE	canonical	3	5618	junction_10	612.470461423	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGCAACTCTGTTTTGTA	2196	False	NA	35	True	AATAAA	-23	NA	81012479	81018335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81017460_81017722
ES.3365.151	chr10	+	2924	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1962.07709949907	6174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGGTCCATGGCCAAG	2196	False	NA	17	True	AATAAA	-14	NA	81012479	81018188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016240_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.153	chr10	+	2846	13	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1947.27336971184	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017370_81017460_81017722
ES.3365.154	chr10	+	4659	4	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	6189	junction_1	379.687590877904	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81015631_81015715
ES.3365.155	chr10	+	3735	8	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	intron_retention	FALSE	canonical	3	5618	junction_5	880.194366290185	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015631_81015715_81016507_81016637_81017245_81017326_81017460_81017722
ES.3365.156	chr10	+	3649	10	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_5	2247.10152951544	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015290_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81017245_81017326
ES.3365.157	chr10	+	3229	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1969.14397044283	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013342_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.158	chr10	+	3649	9	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_8	533.652259786277	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015286_81015377_81015631_81015715_81016246_81016398_81016507_81016637
ES.3365.159	chr10	+	3015	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_13	1878.32510687064	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017402_81017722
ES.3365.16	chr10	+	3460	11	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-23	-340	intron_retention	FALSE	canonical	3	459	junction_3	52.9580966425343	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5519	False	NA	9	True	ATTAAA	-15	NA	80905937	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80913850_80914303_80914465_80915291_80915428_80915704_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.161	chr10	+	4744	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	1	15	-1	intron_retention	FALSE	canonical	3	6189	junction_1	109	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886
ES.3365.162	chr10	+	3053	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1916.51847193144	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017452_81017735
ES.3365.164	chr10	+	3640	10	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-2	intron_retention	FALSE	canonical	3	5618	junction_9	492.697062160643	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637
ES.3365.165	chr10	+	3193	13	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	144	15	-144	intron_retention	FALSE	canonical	3	5618	junction_10	657.372357698943	6174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGGTCCATGGCCAAG	2196	False	NA	17	True	AATAAA	-14	NA	81012479	81018188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326
ES.3365.166	chr10	+	2980	13	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2045.75319598648	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015108_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.167	chr10	+	3570	11	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-2	intron_retention	FALSE	canonical	3	5618	junction_9	519.954815344564	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81016992_81017061
ES.3365.168	chr10	+	3073	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1965.5028385337	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTGTTTTGTACAGCG	2196	False	NA	40	True	AATAAA	-28	NA	81012479	81018340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015995_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.17	chr10	+	3250	12	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-23	-340	intron_retention	FALSE	canonical	3	459	junction_3	53.4434125698148	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5519	False	NA	9	True	ATTAAA	-15	NA	80905937	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.171	chr10	+	3049	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1963.88304524089	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014047_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.172	chr10	+	2097	10	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-145	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2338.42986258349	6173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGGGTCCATGGCCAA	2196	False	NA	16	True	AATAAA	-13	NA	81012479	81018187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013561_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.173	chr10	+	3261	13	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_9	732.06054318539	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.175	chr10	+	3488	11	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	15	1	15	-1	intron_retention	FALSE	canonical	3	5618	junction_10	487.977509727651	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637
ES.3365.176	chr10	+	3158	13	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-1	intron_retention	FALSE	canonical	3	5618	junction_9	732.824231427064	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2196	False	NA	31	True	AATAAA	-19	NA	81012479	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.177	chr10	+	1852	9	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2436.5455278683	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81017110_81017245_81017326_81017460_81017722
ES.3365.178	chr10	+	3557	11	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	intron_retention	FALSE	canonical	3	5618	junction_9	694.055300390394	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81017245_81017326
ES.3365.179	chr10	+	3224	13	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-3	intron_retention	FALSE	canonical	3	5618	junction_9	734.206426278665	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2196	False	NA	29	True	AATAAA	-17	NA	81012479	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.18	chr10	+	2546	14	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-23	-340	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	199.582433918905	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5519	False	NA	9	True	ATTAAA	-15	NA	80905937	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913390_80913514_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.180	chr10	+	2873	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1962.07709949907	6177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCCAAGTGGAGTTC	2196	False	NA	25	True	AATAAA	-22	NA	81012479	81018196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016229_81016446_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.184	chr10	+	3063	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1960.19076175897	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015622_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.185	chr10	+	3080	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1969.39417290801	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013492_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.187	chr10	+	4016	10	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	-2	intron_retention	FALSE	canonical	3	5618	junction_8	536.54843418113	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2196	False	NA	30	True	AATAAA	-18	NA	81012479	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81016992_81017061
ES.3365.188	chr10	+	2930	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1962.07709949907	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2196	False	NA	32	True	AATAAA	-20	NA	81012479	81018332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016129_81016425_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.189	chr10	+	3379	11	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	16	-3	intron_retention	FALSE	canonical	3	5618	junction_8	790.143335098133	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2197	False	NA	29	True	AATAAA	-17	NA	81012480	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81017245_81017326_81017460_81017722
ES.3365.19	chr10	+	3657	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	76	-901	-16	901	multi-exon	FALSE	canonical	3	459	junction_3	51.2387521532504	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGAGTGCTGGCAT	5526	False	NA	NA	False	NA	NA	NA	80905944	80919294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.190	chr10	+	937	6	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	16	3087	16	-1217	5prime_fragment	FALSE	canonical	3	6189	junction_1	336.971571501217	5511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACCTTCTGCCAGCTCA	2197	False	NA	NA	False	NA	NA	NA	81012480	81015245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179
ES.3365.192	chr10	+	3083	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1962.07709949907	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2197	False	NA	30	True	AATAAA	-18	NA	81012480	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016258_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.193	chr10	+	4001	8	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	17	-4	intron_retention	FALSE	canonical	3	5618	junction_6	807.604520309594	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGCTCGCAACTCTG	2198	False	NA	28	True	AATAAA	-16	NA	81012481	81018328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81014069_81014514_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81017245_81017326
ES.3365.195	chr10	+	3985	7	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	23	-1	intron_retention	FALSE	canonical	3	5618	junction_5	854.083410576638	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2204	False	NA	31	True	AATAAA	-19	NA	81012487	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81015286_81015377_81016507_81016637_81017245_81017326
ES.3365.196	chr10	+	2998	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2595.03198324854	6185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCGCAACTCTGTT	2216	False	NA	30	True	AATAAA	-18	NA	81012499	81018330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012564_81013498_81013714_81013886_81014011_81014514_81014727_81014914_81015094_81015179_81015290_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.197	chr10	+	4584	4	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	44	-1	intron_retention	FALSE	canonical	3	5618	junction_3	332.6803604396	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2225	False	NA	31	True	AATAAA	-19	NA	81012508	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81012564_81013498_81013714_81013886_81016507_81016637
ES.3365.198	chr10	+	3082	14	NNC	ENSMUSG00000034994.11	novel	651	3	NA	NA	196	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1967.89302218021	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	2377	False	NA	29	True	AATAAA	-17	NA	81012660	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81012756_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.199	chr10	+	3091	14	NNC	ENSMUSG00000034994.11	novel	651	3	NA	NA	545	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1967.89302218021	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	2726	False	NA	31	True	AATAAA	-19	NA	81013009	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81013112_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.2	chr10	+	206	2	Intergenic	novelGene_2596	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGTTGATGCTCGA	NA	False	NA	NA	False	NA	NA	NA	80825916	80952904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80826072_80952853
ES.3365.200	chr10	+	4594	5	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	607	0	intron_retention	FALSE	canonical	3	5618	junction_3	847.603496630353	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2788	False	NA	32	True	AATAAA	-20	NA	81013071	81018332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81014727_81014914_81015631_81015715_81016507_81016637_81017460_81017722
ES.3365.202	chr10	+	3342	6	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	1582	-1	intron_retention	FALSE	canonical	3	5618	junction_5	569.925960103591	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	3763	False	NA	31	True	AATAAA	-19	NA	81014046	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81016507_81016637
ES.3365.203	chr10	+	2448	11	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2049	146	-1355	-146	3prime_fragment	FALSE	canonical	3	5618	junction_7	752.019919948933	6173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGGGTCCATGGCCA	4230	False	NA	15	True	AATAAA	-12	NA	81014513	81018186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.204	chr10	+	2808	8	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	-1161	-3	intron_retention	FALSE	canonical	3	5618	junction_5	887.601077888816	6185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTCGCAACTCTGT	4424	False	NA	29	True	AATAAA	-17	NA	81014707	81018329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637_81017245_81017326_81017460_81017722
ES.3365.205	chr10	+	2370	10	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2318	143	-1086	-143	3prime_fragment	FALSE	canonical	3	5618	junction_6	791.628248580492	6174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTCCATGGCCAAGT	4499	False	NA	18	True	AATAAA	-15	NA	81014782	81018189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.206	chr10	+	2807	5	NIC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	-872	-146	intron_retention	FALSE	canonical	3	5618	junction_4	601.51781976929	6173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGGGTCCATGGCCA	4713	False	NA	15	True	AATAAA	-12	NA	81014996	81018186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81015286_81015377_81015631_81015715_81015912_81015986_81016507_81016637
ES.3365.207	chr10	+	2059	9	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2714	144	-690	-144	3prime_fragment	FALSE	canonical	3	5618	junction_5	832.925482486279	6174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGGTCCATGGCCAAG	4895	False	NA	17	True	AATAAA	-14	NA	81015178	81018188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.208	chr10	+	2096	8	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2912	1	-492	-1	3prime_fragment	FALSE	canonical	3	5618	junction_4	791.382309117201	6184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	5093	False	NA	31	True	AATAAA	-19	NA	81015376	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ES.3365.209	chr10	+	2121	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3245	143	-159	-143	intron_retention	FALSE	canonical	3	5618	junction_3	625.649706749356	6172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTCCATGGCCAAGT	5426	False	NA	18	True	AATAAA	-15	NA	81015709	81018189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81015912_81015986_81016246_81016398_81016507_81016637
ES.3365.21	chr10	+	8262	7	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-11	-337	intron_retention	FALSE	canonical	3	507	junction_3	44.1008944227766	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTCCTCTCTCTGT	5531	False	NA	12	True	ATTAAA	-18	NA	80905949	80918056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.210	chr10	+	1438	7	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	149	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2824.6628510713	6183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCGCAACTCTGTTT	5734	False	NA	31	True	AATAAA	-19	NA	81016017	81018331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722_81018090_81018266
ES.3365.211	chr10	+	2034	7	NIC	ENSMUSG00000034974.14	novel	1730	9	NA	NA	-22	15	intron_retention	FALSE	canonical	3	321	junction_1	29.7040962382856	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8533	False	NA	10	True	AATAAA	-15	NA	81018816	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.212	chr10	+	1541	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	-4	193	-4	21	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCCCACGCCCCGC	8551	False	NA	16	True	AATAAA	-21	NA	81018834	81028838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.213	chr10	+	1506	9	NNC	ENSMUSG00000034974.14	novel	1730	9	NA	NA	5	15	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	121.385748751655	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8572	False	NA	10	True	AATAAA	-15	NA	81018855	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028267
ES.3365.214	chr10	+	1522	9	NNC	ENSMUSG00000034974.14	novel	1730	9	NA	NA	12	15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	123.000444613018	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8579	False	NA	10	True	AATAAA	-15	NA	81018862	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028244
ES.3365.215	chr10	+	2383	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	26	-679	14	679	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATAGGCCCCTTCACGA	8581	False	NA	NA	False	NA	NA	NA	81018864	81029710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.216	chr10	+	1856	8	NIC	ENSMUSG00000034974.14	novel	1730	9	NA	NA	-4	15	intron_retention	FALSE	canonical	3	321	junction_1	24.9906104816369	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8615	False	NA	10	True	AATAAA	-15	NA	81018898	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81028177_81028259
ES.3365.217	chr10	+	4679	8	NNC	ENSMUSG00000034974.14	novel	1204	8	NA	NA	-3	16	intron_retention	TRUE	non_canonical	0	0	junction_2	169.835935237391	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCCTGTCTCCCACGC	8616	False	NA	11	True	AATAAA	-16	NA	81018899	81028833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81018931_81019809_81021650_81024294_81025307_81025484_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.218	chr10	+	1541	8	FSM	ENSMUSG00000034974.14	ENSMUST00000220076.2	1204	8	6	-343	6	13	multi-exon	FALSE	canonical	3	321	junction_1	26.0149093829689	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTCGCCTGTCTCCCA	8625	False	NA	8	True	AATAAA	-13	NA	81018908	81028830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81018931_81019809_81019910_81025772_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.219	chr10	+	2615	6	NIC	ENSMUSG00000034974.14	novel	1204	8	NA	NA	9	15	intron_retention	FALSE	canonical	3	321	junction_1	21.2263986582746	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8628	False	NA	10	True	AATAAA	-15	NA	81018911	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81018931_81019809_81019910_81025772_81026346_81026431_81026481_81026875_81028177_81028259
ES.3365.22	chr10	+	5098	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-6	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.620804457418	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTCCTCTCTCTGTA	5536	False	NA	13	True	ATTAAA	-19	NA	80905954	80918057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80906298_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.220	chr10	+	1430	8	NIC	ENSMUSG00000034974.14	novel	1730	9	NA	NA	10	15	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	124.878062974427	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8629	False	NA	10	True	AATAAA	-15	NA	81018912	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81027592_81027746_81028130_81028177_81028259
ES.3365.221	chr10	+	1613	9	FSM	ENSMUSG00000034974.14	ENSMUST00000047665.7	1676	9	-134	197	60	17	multi-exon	FALSE	canonical	3	10	junction_1	121.471125684255	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTCTCCCACGCC	8679	False	NA	12	True	AATAAA	-17	NA	81018962	81028834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81019135_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.222	chr10	+	1471	9	NNC	ENSMUSG00000034974.14	novel	1676	9	NA	NA	23	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.730647296484	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTGTCTCCCACGCCCC	8836	False	NA	14	True	AATAAA	-19	NA	81019119	81028836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81019148_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ES.3365.223	chr10	+	1571	9	NNC	ENSMUSG00000034974.14	novel	1482	8	NA	NA	-37	15	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	160.761809441795	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCGCCTGTCTCCCACG	8853	False	NA	10	True	AATAAA	-15	NA	81019136	81028832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81019254_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028244
ES.3365.224	chr10	+	181	1	Intergenic	novelGene_2607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	81056725	81056906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81056700_81056900
ES.3365.225	chr10	+	220	1	Intergenic	novelGene_2608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCCCAGCAATCGAGAG	3408	False	NA	NA	False	NA	NA	NA	81060933	81061153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81060900_81061200
ES.3365.226	chr10	+	176	1	Intergenic	novelGene_2609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCTTTTAAATGT	5881	False	NA	NA	False	NA	NA	NA	81063406	81063582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81063400_81063600
ES.3365.227	chr10	+	6471	11	NIC	ENSMUSG00000034949.19	novel	4525	16	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_1	2.00249843945008	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTGTGGCCTTCATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	81069009	81087955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81069077_81075263_81075349_81075767_81076049_81077828_81081379_81081862_81081996_81082423_81082591_81083052_81083228_81084223_81084363_81084817_81085095_81085518_81085631_81086470
ES.3365.228	chr10	+	3842	17	ISM	ENSMUSG00000034949.19	ENSMUST00000117798.8	3349	18	22	2	1	0	intron_retention	TRUE	canonical	0	0	junction_1	1.8328597873269	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTGTGGCCTTCATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	81069010	81087955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81069077_81073190_81073426_81075263_81075349_81075767_81076049_81077828_81078009_81078603_81078791_81079483_81079630_81080494_81080615_81081238_81081379_81081862_81081996_81082423_81082591_81083052_81083228_81084223_81084363_81084817_81084913_81084998_81085095_81085518_81085631_81086470
ES.3365.229	chr10	+	3867	17	NNC	ENSMUSG00000034949.19	novel	4525	16	NA	NA	-2	0	intron_retention	TRUE	canonical	0	0	junction_2	2.01459518266077	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTGTGGCCTTCATGTC	NA	False	NA	NA	False	AATAAA	-16	NA	81069018	81087955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81069077_81069444_81069596_81075263_81075349_81075767_81076049_81077828_81078009_81078603_81078908_81079483_81079630_81080494_81080615_81081238_81081379_81081862_81081996_81082423_81082591_81083052_81083228_81084223_81084363_81084817_81084913_81084998_81085095_81085518_81085631_81086470
ES.3365.23	chr10	+	2577	14	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	7	-342	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	199.332911149804	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTGCCTGGTCCTCTC	5549	False	NA	7	True	ATTAAA	-13	NA	80905967	80918051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912388_80912575_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.230	chr10	+	3465	19	NIC	ENSMUSG00000034949.19	novel	3349	18	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	1.71503878227035	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGCTGTGGCCTTCATG	NA	False	NA	NA	False	AATAAA	-14	NA	81069019	81087953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81069077_81069444_81069596_81073190_81073426_81075263_81075349_81075767_81076049_81077828_81078009_81078603_81078791_81079483_81079630_81080494_81080615_81081238_81081379_81081862_81081996_81082423_81082591_81083052_81083228_81084223_81084363_81084817_81084913_81084998_81085095_81085518_81085631_81086470_81086569_81087085
ES.3365.231	chr10	+	172	1	Intergenic	novelGene_2610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACTGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	81091948	81092120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81091900_81092100
ES.3365.232	chr10	+	3388	7	ISM	ENSMUSG00000004933.18	ENSMUST00000150605.8	2983	9	-35	9	2	1	intron_retention	FALSE	canonical	2	9	junction_6	2.88675134594813	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACAACTGTCTGATGC	NA	False	NA	NA	False	CATAAA	-17	NA	81093140	81098810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81096808_81097276_81097377_81097464
ES.3365.233	chr10	+	1791	12	NNC	ENSMUSG00000004933.18	novel	1980	14	NA	NA	-21	0	intron_retention	FALSE	non_canonical	0	0	junction_6	4.20153454846958	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTCTGATGCCTGTG	NA	False	NA	NA	False	CATAAA	-22	NA	81093260	81098815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096745_81096808_81097276_81097377_81097464_81097703_81097794_81097991_81098281_81098369_81098456
ES.3365.234	chr10	+	1662	13	FSM	ENSMUSG00000004933.18	ENSMUST00000105328.10	2228	13	181	385	32	-1	multi-exon	FALSE	canonical	2	5	junction_9	3.36237350030534	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACTGTCTGATGCCTGT	NA	False	NA	NA	False	CATAAA	-21	NA	81093313	81098814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097550_81097628_81097703_81097794_81097991_81098281_81098369_81098456
ES.3365.235	chr10	+	1738	12	NIC	ENSMUSG00000004933.18	novel	1980	14	NA	NA	49	0	intron_retention	FALSE	canonical	2	5	junction_9	3.39664394404898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTCTGATGCCTGTG	NA	False	NA	NA	False	CATAAA	-22	NA	81093330	81098815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81093409_81094313_81094374_81095010_81095122_81095216_81095333_81095420_81095641_81095922_81096017_81096741_81096808_81097276_81097377_81097464_81097550_81097628_81097991_81098281_81098369_81098456
ES.3365.236	chr10	+	318	1	Antisense	novelGene_ENSMUSG00000034932.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	81101595	81101913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81101600_81101900
ES.3365.237	chr10	+	3269	11	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-41	0	intron_retention	FALSE	canonical	3	33	junction_1	59.7863696840676	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	67	False	NA	17	True	TATAAA	-20	NA	81102752	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.238	chr10	+	2431	12	NNC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.664718513642	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	91	False	NA	17	True	TATAAA	-20	NA	81102776	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81102968_81103833_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.239	chr10	+	3322	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	-1227	11	-15	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	93	False	NA	17	True	TATAAA	-20	NA	81102778	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.24	chr10	+	2257	12	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	14	-340	combination_of_known_splicesites	FALSE	canonical	1	16	junction_10	151.933869912032	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5556	False	NA	9	True	ATTAAA	-15	NA	80905974	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917433_80917571_80917697
ES.3365.240	chr10	+	2263	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	174	junction_1	26.9833053096187	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1338	False	NA	17	True	TATAAA	-20	NA	81104023	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108538_81108655_81108794_81108882
ES.3365.241	chr10	+	2230	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	17	junction_5	67.4882705858334	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1344	False	NA	17	True	TATAAA	-20	NA	81104029	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108538_81108655_81108794_81108882
ES.3365.242	chr10	+	2154	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_5	73.0521545469442	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1350	False	NA	17	True	TATAAA	-20	NA	81104035	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107244_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.243	chr10	+	2021	11	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	67.9482155762754	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTGGTCAGAAGCTT	1362	False	NA	16	True	TATAAA	-19	NA	81104047	81109068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104643_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.244	chr10	+	1547	11	NNC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.8000726743802	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAGTGGTCAGAAGCT	1362	False	NA	15	True	TATAAA	-18	NA	81104047	81109067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81104154_81105116_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.245	chr10	+	2627	8	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	33	junction_1	67.1574452237397	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1365	False	NA	17	True	TATAAA	-20	NA	81104050	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81108794_81108882
ES.3365.246	chr10	+	3413	4	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	201	junction_3	11.3137084989848	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1370	False	NA	17	True	TATAAA	-20	NA	81104055	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81105296_81105378_81105419_81106801_81107361_81107495
ES.3365.247	chr10	+	2161	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	174	junction_1	24.5014486848088	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAGTGGTCAGAAGCT	1370	False	NA	15	True	TATAAA	-18	NA	81104055	81109067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108794_81108882
ES.3365.248	chr10	+	2156	10	NNC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	4	junction_8	68.6884179860921	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1371	False	NA	17	True	TATAAA	-20	NA	81104056	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108226_81108417_81108794_81108882
ES.3365.249	chr10	+	1938	11	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	81.2945262609974	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1371	False	NA	17	True	TATAAA	-20	NA	81104056	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.25	chr10	+	2312	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-12	-342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	155.840441014377	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTGCCTGGTCCTCTC	5562	False	NA	7	True	ATTAAA	-13	NA	80905980	80918051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916312_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.250	chr10	+	2580	9	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	174	junction_1	28.5558662974878	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1373	False	NA	17	True	TATAAA	-20	NA	81104058	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81108538_81108655_81108794_81108882
ES.3365.251	chr10	+	2045	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	33	junction_1	62.8362559493195	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1373	False	NA	17	True	TATAAA	-20	NA	81104058	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.252	chr10	+	2034	11	NNC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	67.2752554807487	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAGTGGTCAGAAGCT	1373	False	NA	15	True	TATAAA	-18	NA	81104058	81109067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106807_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.253	chr10	+	2122	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	174	junction_1	25.3177339886686	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGTGGTCAGAAGCTT	1374	False	NA	16	True	TATAAA	-19	NA	81104059	81109068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.254	chr10	+	2176	10	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	174	junction_1	26.7614057834444	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1374	False	NA	17	True	TATAAA	-20	NA	81104059	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.255	chr10	+	1495	11	NNC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	66.2483207334344	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1384	False	NA	17	True	TATAAA	-20	NA	81104069	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81104154_81105148_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ES.3365.256	chr10	+	2357	8	NIC	ENSMUSG00000004931.12	novel	2106	11	NA	NA	24	0	intron_retention	FALSE	canonical	3	174	junction_1	25.2441142867491	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGGTCAGAAGCTTG	1393	False	NA	17	True	TATAAA	-20	NA	81104078	81109069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107667_81108018_81108232_81108417_81108794_81108882
ES.3365.257	chr10	+	185	1	Intergenic	novelGene_2611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATCACAG	NA	False	NA	NA	False	NA	NA	NA	81117723	81117908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81117700_81117900
ES.3365.258	chr10	+	179	2	Antisense	novelGene_ENSMUSG00000034872.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81117728	81178127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81117868_81178087
ES.3365.259	chr10	+	350	1	Intergenic	novelGene_2612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACTAAAGATCAA	NA	False	NA	NA	False	NA	NA	NA	81117729	81118079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81117700_81118100
ES.3365.26	chr10	+	5808	11	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-12	-340	intron_retention	FALSE	canonical	3	481	junction_2	50.1606419416658	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5562	False	NA	9	True	ATTAAA	-15	NA	80905980	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.260	chr10	+	4236	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	-25	-3	-25	2	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTCCGGTGACTTATG	4950	False	NA	NA	False	AATAAA	-18	NA	81128771	81155809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.261	chr10	+	4004	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	-7	211	-7	-211	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCGTGTGTCTTACTC	4968	False	NA	NA	False	NA	NA	NA	81128789	81155595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.262	chr10	+	4272	17	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	57.544785547867	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAGAAACAGCTCCTCT	4968	False	NA	NA	False	AATAAA	-5	NA	81128789	81155796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149355_81149825_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.263	chr10	+	4283	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	-12	-1720	5	1	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	4980	False	NA	NA	False	AATAAA	-17	NA	81128801	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.264	chr10	+	3413	18	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-4	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	51.9227533778699	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	4988	False	NA	NA	False	AATAAA	-6	NA	81128809	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599_81154848_81155620
ES.3365.265	chr10	+	5322	17	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	84	junction_15	35.9563537500676	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	4988	False	NA	NA	False	AATAAA	-6	NA	81128809	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.267	chr10	+	4065	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	-4	-1510	-4	-208	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTGTGTCTTACTCATC	4988	False	NA	NA	False	NA	NA	NA	81128809	81155598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.268	chr10	+	1658	14	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	53.6105836058162	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	4989	False	NA	NA	False	AATAAA	-6	NA	81128810	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149221_81155752
ES.3365.269	chr10	+	4988	20	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	78.6853898873066	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	4990	False	NA	NA	False	AATAAA	-16	NA	81128811	81155807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81151712_81151791_81152422_81152801_81153159_81153238_81153599
ES.3365.27	chr10	+	2963	11	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-8	-340	intron_retention	FALSE	canonical	3	459	junction_3	55.0239947659201	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5566	False	NA	9	True	ATTAAA	-15	NA	80905984	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.270	chr10	+	3498	19	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	54.2865340372525	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	4990	False	NA	NA	False	AATAAA	-15	NA	81128811	81155806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599_81154848_81155620
ES.3365.271	chr10	+	4175	17	NIC	ENSMUSG00000034902.18	novel	4258	18	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	57.0756077497209	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTCCTCTCCGGTGAC	4991	False	NA	NA	False	AATAAA	-13	NA	81128812	81155804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.272	chr10	+	1686	12	ISM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	1	5084	1	-270	5prime_fragment	FALSE	canonical	3	173	junction_4	13.6605845500086	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGCGCACCAGCAGGAA	4993	False	NA	NA	False	NA	NA	NA	81128814	81149004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741
ES.3365.273	chr10	+	5425	15	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	97	junction_14	28.1366925808233	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	4999	False	NA	NA	False	AATAAA	-16	NA	81128820	81155807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81150953_81153599
ES.3365.274	chr10	+	4216	17	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.5162066574229	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCCTCTCCGGTGACT	4999	False	NA	NA	False	AATAAA	-14	NA	81128820	81155805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149420_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.275	chr10	+	6731	17	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-1	1	intron_retention	FALSE	canonical	3	14	junction_14	49.9280341466595	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	4999	False	NA	NA	False	AATAAA	-17	NA	81128820	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81153238_81153599
ES.3365.276	chr10	+	4242	17	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.9338380112059	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5000	False	NA	NA	False	AATAAA	-6	NA	81128821	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145078_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149363_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.278	chr10	+	4339	19	FSM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	-15	-1	2	1	multi-exon	FALSE	canonical	2	3	junction_17	62.7837755246991	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5002	False	NA	NA	False	AATAAA	-17	NA	81128823	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153159_81153238_81153599
ES.3365.279	chr10	+	4437	16	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	2	0	intron_retention	FALSE	canonical	1	3	junction_4	54.4057186536693	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	5002	False	NA	NA	False	AATAAA	-15	NA	81128823	81155806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.280	chr10	+	4172	16	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	55.2386338233185	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5002	False	NA	NA	False	AATAAA	-17	NA	81128823	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149355_81149825_81149928_81150825_81150953_81153599
ES.3365.281	chr10	+	4138	17	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	52.8884439173625	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACAGCTCCTCTCCGGT	5003	False	NA	NA	False	AATAAA	-10	NA	81128824	81155801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.282	chr10	+	6467	17	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	3	1	intron_retention	FALSE	canonical	3	104	junction_16	26.4580298539026	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5003	False	NA	NA	False	AATAAA	-17	NA	81128824	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81153238_81153599
ES.3365.283	chr10	+	4520	18	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	53.352454761386	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5003	False	NA	NA	False	AATAAA	-17	NA	81128824	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.284	chr10	+	4492	16	NIC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	3	-9	intron_retention	FALSE	canonical	3	97	junction_15	28.3592822350794	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5003	False	NA	NA	False	AATAAA	-6	NA	81128824	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.285	chr10	+	4165	16	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.2386338233185	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5003	False	NA	NA	False	AATAAA	-6	NA	81128824	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149363_81149828_81149928_81150825_81150953_81153599
ES.3365.286	chr10	+	4478	17	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	3	-9	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_2	66.0893984974141	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5003	False	NA	NA	False	AATAAA	-6	NA	81128824	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81140972_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153599
ES.3365.287	chr10	+	4262	18	FSM	ENSMUSG00000034902.18	ENSMUST00000161854.8	4258	18	-13	9	3	-9	multi-exon	FALSE	canonical	1	3	junction_3	55.0099078839251	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5003	False	NA	NA	False	AATAAA	-6	NA	81128824	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141126_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.288	chr10	+	6821	16	ISM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	-7	0	-6	0	intron_retention	FALSE	canonical	3	170	junction_14	15.3356519986019	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	5010	False	NA	NA	False	AATAAA	-16	NA	81128831	81155807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825
ES.3365.289	chr10	+	4476	18	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	66.7524995320147	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5010	False	NA	NA	False	AATAAA	-17	NA	81128831	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.29	chr10	+	1603	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	-23	-24	9	-20	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGTGACCTCACTCA	1109	False	NA	37	True	NA	NA	NA	80941757	80959741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.290	chr10	+	4423	17	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	50.6098742835823	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5011	False	NA	NA	False	AATAAA	-6	NA	81128832	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153599
ES.3365.291	chr10	+	4469	18	NNC	ENSMUSG00000034902.18	novel	4258	18	NA	NA	-5	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	75.7806888512381	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5011	False	NA	NA	False	AATAAA	-6	NA	81128832	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141126_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149241_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.293	chr10	+	2280	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	19	252	-5	-11	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTTGGGTCTTTTTT	5011	False	NA	NA	False	NA	NA	NA	81128832	81153836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.294	chr10	+	5687	18	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	8	junction_16	49.6875357717875	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5012	False	NA	NA	False	AATAAA	-6	NA	81128833	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81153238_81153599
ES.3365.295	chr10	+	4518	17	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-4	-247	intron_retention	FALSE	canonical	1	3	junction_4	68.2943708789385	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTTATTGTTGAAT	5012	False	NA	NA	False	NA	NA	NA	81128833	81155559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.297	chr10	+	3483	12	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.8173097835179	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	5012	False	NA	NA	False	AATAAA	-15	NA	81128833	81155806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141577_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153599
ES.3365.298	chr10	+	4390	17	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	66.1381130665216	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCCTCTCCGGTGA	5013	False	NA	NA	False	AATAAA	-12	NA	81128834	81155803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153599
ES.3365.299	chr10	+	2938	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	38	1232	-3	486	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGCCAGCAGCCTGAAG	5013	False	NA	NA	False	NA	NA	NA	81128834	81154574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.3	chr10	+	4579	1	Antisense	novelGene_ENSMUSG00000043670.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	80854451	80859030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_80854500_80859000
ES.3365.30	chr10	+	3519	9	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	8	junction_6	234.661325104926	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1109	False	NA	13	True	NA	NA	NA	80941757	80959717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955327_80956945_80957736_80958447_80959453
ES.3365.302	chr10	+	4072	16	NIC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	53.6500595422679	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	5014	False	NA	NA	False	AATAAA	-17	NA	81128835	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81150825_81150953_81153599
ES.3365.303	chr10	+	3705	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	22	-1176	-2	-542	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTGTCCCCATCCTGTT	5014	False	NA	NA	False	NA	NA	NA	81128835	81155264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.304	chr10	+	4214	17	NIC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	53.0232481440924	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	5016	False	NA	NA	False	AATAAA	-15	NA	81128837	81155806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81140972_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.305	chr10	+	4234	18	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	62.7293301265962	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	5018	False	NA	NA	False	AATAAA	-6	NA	81128839	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153599
ES.3365.306	chr10	+	4036	16	NIC	ENSMUSG00000034902.18	novel	4258	18	NA	NA	-6007	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	54.3235574027409	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	1006	False	NA	NA	False	AATAAA	-17	NA	81140514	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81140550_81141019_81141126_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.307	chr10	+	4090	17	ISM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	11701	-1709	-6007	-9	3prime_fragment	FALSE	canonical	3	84	junction_15	36.6652402658158	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	1006	False	NA	NA	False	AATAAA	-6	NA	81140514	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.308	chr10	+	6107	14	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-4953	1	intron_retention	FALSE	canonical	1	3	junction_1	57.5301310300208	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTCTCCGGTGACTTAT	2060	False	NA	NA	False	AATAAA	-17	NA	81141568	81155808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81141664_81142178_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81153238_81153599
ES.3365.309	chr10	+	6266	13	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-3649	-9	intron_retention	FALSE	canonical	2	3	junction_11	73.3997331966087	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	3364	False	NA	NA	False	AATAAA	-6	NA	81142872	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81152801_81153159_81153238_81153599
ES.3365.31	chr10	+	4473	8	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	8	junction_6	242.254714998027	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1118	False	NA	-31	True	NA	NA	NA	80941766	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955327_80956945_80957736
ES.3365.310	chr10	+	7863	6	NIC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	-1691	-3	intron_retention	FALSE	canonical	3	170	junction_4	18.7467330487208	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCCTCTCCGGTGA	5322	False	NA	NA	False	AATAAA	-12	NA	81144830	81155803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81145082_81146512_81148421_81148741_81149336_81149453_81149487_81149828_81149928_81150825
ES.3365.311	chr10	+	2386	4	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	80.018053518496	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	7186	False	NA	NA	False	AATAAA	-15	NA	81146694	81155806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81146719_81147476_81147528_81150848_81150953_81153599
ES.3365.312	chr10	+	3257	7	NNC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	963	-9	intron_retention	FALSE	canonical	0	0	junction_4	82.8145518613728	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	7976	False	NA	NA	False	AATAAA	-6	NA	81147484	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81147561_81147807_81147857_81148335_81148421_81148741_81149365_81149828_81149928_81150825_81150953_81153599
ES.3365.313	chr10	+	3621	7	NIC	ENSMUSG00000034902.18	novel	4258	18	NA	NA	-1240	-9	intron_retention	FALSE	canonical	3	84	junction_5	48.8228088772724	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	8448	False	NA	NA	False	AATAAA	-6	NA	81147956	81155797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ES.3365.314	chr10	+	2985	6	NIC	ENSMUSG00000034902.18	novel	4208	17	NA	NA	-1227	-554	intron_retention	FALSE	canonical	3	97	junction_5	41.4033815044134	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGACTCCCCATCGTGT	8461	False	NA	NA	False	NA	NA	NA	81147969	81155252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.315	chr10	+	3379	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	-389	-3	intron_retention	FALSE	canonical	3	160	junction_2	16.318263212907	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5080	False	NA	13	True	AATAGA	-12	NA	81156547	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.316	chr10	+	3218	5	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	-133	-4	intron_retention	FALSE	canonical	3	23	junction_3	71.4190975860099	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCTTCTGATCTGA	5336	False	NA	12	True	AATAGA	-11	NA	81156803	81162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159859_81160702_81160823_81160923
ES.3365.317	chr10	+	2836	7	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	91	-3	intron_retention	FALSE	canonical	3	160	junction_2	14.2322013601395	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5560	False	NA	13	True	AATAGA	-12	NA	81157027	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159859_81160136_81160330_81160702_81160823_81160923
ES.3365.318	chr10	+	2628	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	91	-4	91	4	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGATCTGAGTCACAGG	5560	False	NA	20	True	AATAGA	-19	NA	81157027	81162080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.319	chr10	+	2549	7	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	95	-6	intron_retention	FALSE	canonical	3	23	junction_4	63.6596854811234	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTGGCTTCTGATCT	5564	False	NA	10	True	AATAGA	-9	NA	81157031	81162070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159859_81160702_81160823_81160923_81161211_81161297
ES.3365.32	chr10	+	1465	11	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-14	20	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	214.132762556317	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTGTTGTGACCTCA	1118	False	NA	33	True	NA	NA	NA	80941766	80959737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955410_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.320	chr10	+	3271	7	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	95	0	intron_retention	FALSE	canonical	3	160	junction_2	17.0652343148936	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5564	False	NA	16	True	AATAGA	-15	NA	81157031	81162076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81160823_81160923_81161211_81161297
ES.3365.321	chr10	+	2411	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	108	-3	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	59.2982774984714	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5577	False	NA	13	True	AATAGA	-12	NA	81157044	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160702_81160823_81160923_81161211_81161297
ES.3365.322	chr10	+	3939	7	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	115	-4	intron_retention	FALSE	canonical	3	160	junction_1	15.7841340873958	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCTTCTGATCTGA	5584	False	NA	12	True	AATAGA	-11	NA	81157051	81162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81158840_81158954_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.323	chr10	+	2721	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	119	-3	intron_retention	FALSE	canonical	3	160	junction_2	15.9463385855724	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5588	False	NA	13	True	AATAGA	-12	NA	81157055	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.324	chr10	+	4800	3	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	120	-4	intron_retention	FALSE	canonical	3	160	junction_1	14.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCTTCTGATCTGA	5589	False	NA	12	True	AATAGA	-11	NA	81157056	81162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81158840_81158954_81160823_81160923
ES.3365.325	chr10	+	3353	6	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	120	0	intron_retention	FALSE	canonical	3	160	junction_2	17.6113599702011	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5589	False	NA	16	True	AATAGA	-15	NA	81157056	81162076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.326	chr10	+	3307	6	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	122	-3	intron_retention	FALSE	canonical	3	160	junction_2	15.2761251631427	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5591	False	NA	13	True	AATAGA	-12	NA	81157058	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159616_81159743_81160330_81160702_81160823_81160923
ES.3365.327	chr10	+	2587	9	NNC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.3306886330311	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5591	False	NA	16	True	AATAGA	-15	NA	81157058	81162076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81157281_81158271_81158840_81158954_81159095_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.328	chr10	+	3811	4	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	122	0	intron_retention	FALSE	canonical	3	160	junction_2	17.9071680247511	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5591	False	NA	16	True	AATAGA	-15	NA	81157058	81162076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81160823_81160923
ES.3365.329	chr10	+	3307	4	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	125	-3	intron_retention	FALSE	canonical	1	1	junction_2	92.1013934024164	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5594	False	NA	13	True	AATAGA	-12	NA	81157061	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81159452_81160823_81160923
ES.3365.33	chr10	+	2027	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	-10	-461	-10	-353	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGTGTCTGCACCTTC	1122	False	NA	35	True	AATACA	-29	NA	80941770	80960178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.330	chr10	+	2323	9	NNC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	125	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.2614196352765	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5594	False	NA	13	True	AATAGA	-12	NA	81157061	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161561
ES.3365.331	chr10	+	3421	9	NNC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	125	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9820162824278	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5594	False	NA	13	True	AATAGA	-12	NA	81157061	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81157281_81157437_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.332	chr10	+	3324	6	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	125	-4	intron_retention	FALSE	canonical	3	160	junction_2	14.2632394637403	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGGCTTCTGATCTGA	5594	False	NA	12	True	AATAGA	-11	NA	81157061	81162072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81160823_81160923
ES.3365.333	chr10	+	3716	5	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	127	-3	intron_retention	FALSE	canonical	3	160	junction_2	19.421315609402	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5596	False	NA	13	True	AATAGA	-12	NA	81157063	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81160823_81160923_81161211_81161297
ES.3365.334	chr10	+	2530	9	NNC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	155	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.3561362458286	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5624	False	NA	13	True	AATAGA	-12	NA	81157091	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160303_81160702_81160823_81160923_81161211_81161297
ES.3365.335	chr10	+	2956	7	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	162	-3	intron_retention	FALSE	canonical	3	160	junction_2	17.173137938847	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	5631	False	NA	13	True	AATAGA	-12	NA	81157098	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81160330_81160702_81160823_81160923_81161211_81161297
ES.3365.337	chr10	+	3489	3	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	-870	0	intron_retention	FALSE	canonical	3	189	junction_1	11	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	6932	False	NA	16	True	AATAGA	-15	NA	81158399	81162076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81160823_81160923_81161211_81161297
ES.3365.338	chr10	+	1261	4	NNC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	906	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.2907443282176	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTTCTGATCTGAG	8774	False	NA	13	True	AATAGA	-12	NA	81160241	81162073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81160330_81160702_81160823_81160923_81161211_81161307
ES.3365.339	chr10	+	4222	4	Fusion	ENSMUSG00000034881.9_ENSMUSG00000034889.9	novel	1919	4	NA	NA	2420	1	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGAGCACTCCCCTAA	1037	False	NA	NA	False	AATAAA	-16	NA	81161755	81171007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_81164328_81164680_81164752_81168225_81169090_81170292
ES.3365.34	chr10	+	2175	10	NIC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	1	18	intron_retention	FALSE	canonical	3	562	junction_7	62.6780919450851	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGCTTGTTGTGACCT	1133	False	NA	31	True	NA	NA	NA	80941781	80959735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80958447_80959453
ES.3365.340	chr10	+	178	1	Intergenic	novelGene_2613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAAAGTTGAAG	2024	False	NA	NA	False	NA	NA	NA	81175339	81175517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81175300_81175500
ES.3365.36	chr10	+	4045	8	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	1	-360	intron_retention	FALSE	canonical	3	8	junction_5	249.599352432441	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCTGGGGAGTGTCTG	1133	False	NA	28	True	AATACA	-22	NA	80941781	80960171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80955216_80955327_80956945_80957736_80958447_80959453
ES.3365.37	chr10	+	1425	11	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	210.562009868827	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTTGTATTTATATTTC	1133	False	NA	NA	False	NA	NA	NA	80941781	80969809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80969675
ES.3365.38	chr10	+	3550	8	NIC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	2	-6	intron_retention	FALSE	canonical	3	635	junction_2	51.9084751839078	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1134	False	NA	-31	True	NA	NA	NA	80941782	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80955216_80955323_80956945_80957736_80958447_80959453
ES.3365.39	chr10	+	3354	10	NIC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	2	-356	intron_retention	FALSE	canonical	3	635	junction_2	48.4892758921311	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGGAGTGTCTGCACC	1134	False	NA	32	True	AATACA	-26	NA	80941782	80960175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.4	chr10	+	2491	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	7	334	7	-334	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCCTCTCTCTGTACT	5457	False	NA	15	True	ATTAAA	-21	NA	80905875	80918059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.42	chr10	+	1546	11	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-4	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	248.183077585882	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTGTTGTGACCTCA	1153	False	NA	33	True	NA	NA	NA	80941801	80959737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954052_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.43	chr10	+	2833	10	NIC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	635	junction_2	48.4892758921311	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1153	False	NA	-31	True	NA	NA	NA	80941801	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.44	chr10	+	2346	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	23	-813	-2	-1	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGACTTTTTGTGTGT	1155	False	NA	NA	False	NA	NA	NA	80941803	80960530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.45	chr10	+	1676	12	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	273.666624723592	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1155	False	NA	-31	True	NA	NA	NA	80941803	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80947221_80947409_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.46	chr10	+	1639	10	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-2	-6	intron_retention	FALSE	canonical	0	0	junction_6	227.237733781872	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1155	False	NA	-31	True	NA	NA	NA	80941803	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955410_80956709_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.47	chr10	+	3619	10	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-2	-9	intron_retention	FALSE	canonical	1	1	junction_8	285.01500935136	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCTAGCTGCGGCTGT	1155	False	NA	4	True	NA	NA	NA	80941803	80959708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80956945_80957736_80958447_80958812_80958964_80959453
ES.3365.48	chr10	+	1961	10	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	0	-6	intron_retention	FALSE	canonical	2	21	junction_7	217.367470620492	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1157	False	NA	-31	True	NA	NA	NA	80941805	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955410_80956879_80956945_80957736_80958447_80959453
ES.3365.49	chr10	+	1634	12	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	305.558937789111	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1157	False	NA	-31	True	NA	NA	NA	80941805	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955327_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80958812_80958964_80959453
ES.3365.5	chr10	+	2270	12	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	20	-340	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	162.666672311791	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5470	False	NA	9	True	ATTAAA	-15	NA	80905888	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.50	chr10	+	4106	9	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	2	-353	intron_retention	FALSE	canonical	0	0	junction_3	233.547505874073	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGTGTCTGCACCTTC	1159	False	NA	35	True	AATACA	-29	NA	80941807	80960178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951179_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80956945_80957736_80958447_80959453
ES.3365.52	chr10	+	2198	11	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	25	6	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_7	209.447368090411	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTGTGTGCTTGCC	1182	False	NA	NA	False	NA	NA	NA	80941830	80960537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955410_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.53	chr10	+	4414	8	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	26	-353	intron_retention	FALSE	canonical	1	1	junction_1	329.753030652471	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGTGTCTGCACCTTC	1183	False	NA	35	True	AATACA	-29	NA	80941831	80960178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942208_80944581_80944793_80950859_80951007_80953985_80955216_80955327_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.55	chr10	+	1484	11	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	285.293603152962	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1183	False	NA	-31	True	NA	NA	NA	80941831	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955327_80955538_80956852_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.56	chr10	+	3304	9	Fusion	ENSMUSG00000034902.18_ENSMUSG00000035027.19	novel	865	7	NA	NA	33	6	multi-exon	FALSE	canonical	0	0	junction_2	183.991847645487	7794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGGTGACTTATGCGTG	1190	False	NA	NA	False	AATAAA	-22	NA	80941838	81155813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_80942073_80944581_80944793_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ES.3365.57	chr10	+	1283	11	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	346	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	211.816524379001	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1876	False	NA	-31	True	NA	NA	NA	80942524	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942588_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.58	chr10	+	1389	12	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	346	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	272.661719394455	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	1876	False	NA	-31	True	NA	NA	NA	80942524	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942588_80943914_80944021_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ES.3365.59	chr10	+	2360	10	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	372	-360	intron_retention	FALSE	canonical	3	15	junction_1	252.576403304372	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCTGGGGAGTGTCTG	1902	False	NA	28	True	AATACA	-22	NA	80942550	80960171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80942588_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80958447_80959453
ES.3365.6	chr10	+	2451	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	33	-342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	156.610096169507	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCTGCCTGGTCCTCTC	5483	False	NA	7	True	ATTAAA	-13	NA	80905901	80918051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912782_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.60	chr10	+	1324	10	NNC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	2404	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	220.955053806128	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAACAAAATGAAGA	3934	False	NA	-31	True	NA	NA	NA	80944582	80959673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958552_80959453
ES.3365.61	chr10	+	3960	1	NIC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	-5496	-2050	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGATGCTCGATGGAA	8301	False	NA	NA	False	NA	NA	NA	80948949	80952909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80948900_80952900
ES.3365.62	chr10	+	175	1	Intergenic	novelGene_2601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGTTAAAAAAAAAA	8871	False	NA	NA	False	NA	NA	NA	80949519	80949694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_80949500_80949700
ES.3365.63	chr10	+	597	1	NIC	ENSMUSG00000035027.19	novel	662	7	NA	NA	4764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTTGTATTTATATTTC	NA	False	NA	NA	False	NA	NA	NA	80969212	80969809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80969200_80969800
ES.3365.64	chr10	+	2887	1	Genic_Genomic	ENSMUSG00000035011.16	novel	NA	NA	NA	NA	-835	-6836	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGCCCGAGAGAGGC	NA	False	NA	NA	False	GGGGCT	-36	NA	80970218	80973105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_80970200_80973100
ES.3365.65	chr10	+	2931	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	252	1135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGGTAGAATCCACTTGC	NA	False	NA	9	True	AATAAA	-18	NA	80971305	80985427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80971357_80979795_80981052_80983803
ES.3365.66	chr10	+	2997	3	NIC	ENSMUSG00000035011.16	novel	907	2	NA	NA	252	1132	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	40.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80971305	80985424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80971426_80979795_80981052_80983803
ES.3365.67	chr10	+	3317	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-546	-930	-268	915	multi-exon	FALSE	canonical	3	10	junction_1	36.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACGAAGGCAGAACATT	NA	False	NA	NA	False	AATAAA	-17	NA	80971836	80985207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.68	chr10	+	6162	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-535	-3786	-257	7	multi-exon	FALSE	canonical	3	10	junction_1	36.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTCTCTGTGTTCTGT	NA	False	NA	29	True	CATAAA	-45	NA	80971847	80988063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.69	chr10	+	3293	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-288	-1164	-10	1149	multi-exon	FALSE	canonical	3	10	junction_1	36.5	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCGCTCCCGAGACTCA	NA	False	NA	23	True	AATAAA	-32	NA	80972094	80985441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.7	chr10	+	4444	8	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	40	-340	intron_retention	FALSE	canonical	1	5	junction_2	199.919575666551	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5490	False	NA	9	True	ATTAAA	-15	NA	80905908	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_80906113_80908986_80909200_80912776_80913850_80914303_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.70	chr10	+	2734	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-96	-797	-96	782	multi-exon	FALSE	canonical	3	10	junction_1	36.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGCAGCAGTTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	80972286	80985074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.71	chr10	+	3944	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	239	1755	-39	-1755	multi-exon	FALSE	canonical	3	9	junction_1	37	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATCCTGGCCAGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	80972343	80986301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972534_80979795_80981052_80983803
ES.3365.72	chr10	+	4699	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-37	-2821	-37	-958	multi-exon	FALSE	canonical	3	10	junction_1	36.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80972345	80987098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.73	chr10	+	3031	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	274	2633	-4	1131	multi-exon	FALSE	canonical	3	9	junction_1	37	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCTCCGGTAGAATCCAC	NA	False	NA	5	True	AATAAA	-14	NA	80972378	80985423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972534_80979795_80981052_80983803
ES.3365.74	chr10	+	1843	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	-2	0	-2	0	multi-exon	FALSE	canonical	3	10	junction_1	36.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACCAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80972380	80984277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.75	chr10	+	5663	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	277	-2	-1	2	multi-exon	FALSE	canonical	3	9	junction_1	37	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCTGGTCTCTGTGT	NA	False	NA	24	True	CATAAA	-40	NA	80972381	80988058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972534_80979795_80981052_80983803
ES.3365.76	chr10	+	4978	3	NNC	ENSMUSG00000035011.16	novel	1841	3	NA	NA	5	-542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATCCTATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	80972387	80987514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80972494_80979795_80980957_80983803
ES.3365.77	chr10	+	4192	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	31	-2382	2	-1397	multi-exon	FALSE	canonical	3	10	junction_1	36.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGTGGAATTCACTAG	NA	False	NA	NA	False	GATAAA	-12	NA	80972413	80986659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972494_80979795_80981052_80983803
ES.3365.78	chr10	+	4233	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	309	1396	2	-1396	multi-exon	FALSE	canonical	3	9	junction_1	37	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGGAATTCACTAGA	NA	False	NA	NA	False	GATAAA	-13	NA	80972413	80986660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80972534_80979795_80981052_80983803
ES.3365.79	chr10	+	3363	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-365	-1135	-365	1135	multi-exon	FALSE	canonical	3	48	junction_1	17.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGGTAGAATCCACTTGC	NA	False	NA	9	True	AATAAA	-18	NA	80973421	80985427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.8	chr10	+	2482	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	-44	-340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	156.911245259506	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTGGTCCTCTCTC	5498	False	NA	9	True	ATTAAA	-15	NA	80905916	80918053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913708_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ES.3365.80	chr10	+	2263	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-348	-52	-348	52	multi-exon	FALSE	canonical	3	48	junction_1	17.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGAGTAAGCAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	80973438	80984344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.81	chr10	+	5958	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-331	-3764	-331	0	multi-exon	FALSE	canonical	3	48	junction_1	17.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGCCTGGTCTCTGT	NA	False	NA	22	True	CATAAA	-38	NA	80973455	80988056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.82	chr10	+	3761	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-137	-1761	-137	1761	multi-exon	FALSE	canonical	3	48	junction_1	17.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGGTTTTCCTTTCTAA	NA	False	NA	NA	False	TTTAAA	-39	NA	80973649	80986053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.83	chr10	+	2796	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-11	-922	-11	922	multi-exon	FALSE	canonical	3	48	junction_1	17.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAGAACATTTTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	80973775	80985214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.84	chr10	+	5096	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	-11	-3222	-11	-542	multi-exon	FALSE	canonical	3	48	junction_1	17.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATCCTATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	80973775	80987514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.85	chr10	+	4210	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	21	-2368	21	-1396	multi-exon	FALSE	canonical	3	48	junction_1	17.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGGAATTCACTAGA	NA	False	NA	NA	False	GATAAA	-13	NA	80973807	80986660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.86	chr10	+	4688	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	37	-2862	37	-902	multi-exon	FALSE	canonical	3	48	junction_1	17.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATCTATAGAACCCA	NA	False	NA	NA	False	NA	NA	NA	80973823	80987154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.87	chr10	+	4395	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	54	-2586	54	-1178	multi-exon	FALSE	canonical	3	48	junction_1	17.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAACAGAAATTTGTTACT	NA	False	NA	NA	False	AAAAAG	-12	NA	80973840	80986878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_80973905_80979795_80981052_80983803
ES.3365.88	chr10	+	4764	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	2945	-902	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATCTATAGAACCCA	NA	False	NA	NA	False	NA	NA	NA	80976731	80987154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80976889_80979795_80981052_80983803
ES.3365.89	chr10	+	3000	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	2978	1131	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCTCCGGTAGAATCCAC	NA	False	NA	5	True	AATAAA	-14	NA	80976764	80985423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80976889_80979795_80981052_80983803
ES.3365.90	chr10	+	4242	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	3985	-1426	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGGCCGTGATAAAAG	NA	False	NA	NA	False	NA	NA	NA	80977771	80986630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80977931_80979795_80981052_80983803
ES.3365.91	chr10	+	3173	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4006	1133	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGGTAGAATCCACTT	NA	False	NA	7	True	AATAAA	-16	NA	80977792	80985425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80978088_80979795_80981052_80983803
ES.3365.92	chr10	+	3007	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4016	1134	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGGTAGAATCCACTTG	NA	False	NA	8	True	AATAAA	-17	NA	80977802	80985426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80977931_80979795_80981052_80983803
ES.3365.93	chr10	+	4760	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4035	1132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80977821	80985424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80979705_80979795_80981052_80983803
ES.3365.94	chr10	+	2950	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4043	914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACACGAAGGCAGAACAT	NA	False	NA	NA	False	AATAAA	-16	NA	80977829	80985206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80978121_80979795_80981052_80983803
ES.3365.95	chr10	+	3159	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4051	1131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCTCCGGTAGAATCCAC	NA	False	NA	5	True	AATAAA	-14	NA	80977837	80985423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80978121_80979795_80981052_80983803
ES.3365.96	chr10	+	2895	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4069	918	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAAGGCAGAACATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	80977855	80985210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80978088_80979795_80981052_80983803
ES.3365.97	chr10	+	3056	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	4871	1132	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80978657	80985424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80978837_80979795_80981052_80983803
ES.3365.98	chr10	+	3976	2	ISM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	4912	-1134	4912	1134	3prime_fragment	FALSE	canonical	3	83	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGGTAGAATCCACTTG	NA	False	NA	8	True	AATAAA	-17	NA	80978698	80985426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_80981052_80983803
ES.3365.99	chr10	+	4185	3	NNC	ENSMUSG00000035011.16	novel	907	2	NA	NA	5488	-1754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCTGGCCAGTGGCC	NA	False	NA	NA	False	AATAAA	-17	NA	80979274	80986302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_80979705_80979795_80981052_80983803
ES.33650.1	chr8	-	4053	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	31	-769	14	765	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGGATCCGATGTCCTC	NA	False	NA	NA	False	NA	NA	NA	96580136	96561782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.10	chr8	-	3645	9	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	17	0	intron_retention	FALSE	non_canonical	0	0	junction_6	113.174574772782	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580133	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96572130_96575273_96575397_96579429_96579536_96580113
ES.33650.11	chr8	-	3208	12	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	99.6786572478974	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580152	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572522_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.12	chr8	-	3626	10	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_3	110.040396622735	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580135	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.13	chr8	-	3185	11	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	104.533056972424	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580141	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570724_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.14	chr8	-	3519	13	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	119.15777938888	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580150	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96576484_96576702_96579429_96579536_96580113
ES.33650.15	chr8	-	3821	11	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	5	0	intron_retention	FALSE	canonical	3	8	junction_6	102.144799182337	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580145	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572356_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.16	chr8	-	5157	9	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	613	0	intron_retention	FALSE	canonical	3	251	junction_5	38.2385603808512	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96579537	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
ES.33650.17	chr8	-	3358	13	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.502116099046	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580140	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96567515_96567582_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.19	chr8	-	4953	10	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	360	1	intron_retention	FALSE	canonical	3	251	junction_6	41.3210854015893	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCTCCTTTATCT	NA	False	NA	-3	True	AATAAA	-16	NA	96579790	96562550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
ES.33650.20	chr8	-	4095	11	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	16	1	intron_retention	FALSE	canonical	3	212	junction_10	47.8394188927917	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCTCCTTTATCT	NA	False	NA	-3	True	AATAAA	-16	NA	96580134	96562550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.22	chr8	-	4464	10	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	29	1	intron_retention	FALSE	canonical	2	9	junction_9	104.636702481361	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCTCCTTTATCT	NA	False	NA	-3	True	AATAAA	-16	NA	96580121	96562550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
ES.33650.26	chr8	-	3169	11	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	104.533056972424	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCTCCTTTATCT	NA	False	NA	-3	True	AATAAA	-16	NA	96580135	96562550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.27	chr8	-	3568	12	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.6136337709746	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTCTCCTTTATCT	NA	False	NA	-3	True	AATAAA	-16	NA	96580141	96562550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564578_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.29	chr8	-	3353	12	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	97.6394108209106	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580135	96562551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572356_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.3	chr8	-	3335	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	-16	-4	-16	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580183	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.30	chr8	-	3180	11	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	98.0688023787382	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580138	96562551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96580113
ES.33650.31	chr8	-	3274	10	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_7	106.87560555023	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580132	96562551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96575269_96575397_96579429_96579536_96580113
ES.33650.32	chr8	-	3964	10	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	212	junction_9	51.3436738021947	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580133	96562551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.33	chr8	-	3542	11	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	14	-1	intron_retention	FALSE	canonical	3	8	junction_7	100.038192706586	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTGTGTCTCCTTTAT	NA	False	NA	-5	True	AATAAA	-14	NA	96580136	96562552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572356_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.35	chr8	-	2011	12	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	12	-1127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.8602329043072	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTCTGGTAGCTTCG	NA	False	NA	NA	False	TATAAA	-27	NA	96580138	96563678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567041_96567097_96568149_96568202_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.37	chr8	-	2147	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	27	1141	10	-1141	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGGTCCCCTATGAGT	NA	False	NA	NA	False	TATAAA	-13	NA	96580140	96563692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.38	chr8	-	2034	11	NIC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	15	-1143	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	98.0688023787382	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTTGGTCCCCTATGA	NA	False	NA	NA	False	TATAAA	-11	NA	96580135	96563694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96580113
ES.33650.39	chr8	-	2884	11	NNC	ENSMUSG00000036534.7	novel	3315	12	NA	NA	12	257	intron_retention	FALSE	canonical	0	0	junction_1	125.841527327031	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGGAGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	96580138	96566271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96567097_96567204_96567327_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.4	chr8	-	3758	11	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	212	junction_10	48.716013794234	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580152	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.40	chr8	-	2728	9	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	613	246	intron_retention	FALSE	canonical	3	251	junction_5	41.0182886039874	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	96579537	96566282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
ES.33650.41	chr8	-	1412	9	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	31	6121	14	-167	5prime_fragment	FALSE	canonical	3	212	junction_8	45.5958811188028	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCGTGCCAGATCTGTT	NA	False	NA	NA	False	NA	NA	NA	96580136	96568672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.42	chr8	-	1317	3	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	33	11655	16	-5701	5prime_fragment	FALSE	canonical	3	212	junction_2	72.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAGAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	96580134	96574206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96575397_96579429_96579536_96580113
ES.33650.43	chr8	-	2728	1	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	37	-8880	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATGTTCTA	NA	False	NA	NA	False	NA	NA	NA	96580113	96577385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96577400_96580100
ES.33650.5	chr8	-	3321	12	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	97.860585604604	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580130	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567002_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.7	chr8	-	2943	10	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	106.761878802464	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580135	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96575008_96575397_96579429_96579536_96580113
ES.33650.8	chr8	-	3184	12	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.145003799085	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580141	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96564300_96567002_96567097_96568149_96568202_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33650.9	chr8	-	4556	10	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	212	junction_9	47.3586265232939	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580138	96562547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ES.33651.1	chr8	-	206	1	Intergenic	novelGene_27384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATTAAACTAGACTGT	NA	False	NA	35	True	NA	NA	NA	96580977	96580771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96580800_96581000
ES.33652.10	chr8	-	174	1	Intergenic	novelGene_27386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTGGTTATTTCTGC	NA	False	NA	NA	False	NA	NA	NA	96597185	96597011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96597000_96597200
ES.33652.11	chr8	-	176	1	Intergenic	novelGene_27387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	96603349	96603173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96603200_96603300
ES.33652.12	chr8	-	2084	1	FSM	ENSMUSG00000031672.9	ENSMUST00000212861.2	2057	1	-9	-18	-9	18	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGCCAGCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	96615029	96612945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96612900_96615000
ES.33652.2	chr8	-	2408	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	122	0	-33	0	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615053	96590761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33652.3	chr8	-	4396	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	203.226991013849	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615038	96590761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96591880_96593448_96594478_96594974_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33652.4	chr8	-	3933	10	NNC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_2	246.771149042995	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTGTCTGCTTTTCTA	NA	False	NA	-6	True	AATAAA	-15	NA	96615032	96590763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_96591876_96593444_96593600_96594551_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33652.6	chr8	-	1331	7	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	14083	583	-2072	340	3prime_fragment	FALSE	canonical	3	353	junction_1	110.629511835174	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTCCTCAAGTTCG	NA	False	NA	NA	False	AATAGA	-34	NA	96601092	96591344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031
ES.33652.7	chr8	-	1487	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	155	888	0	35	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACGGTGCATAACTCAG	NA	False	NA	NA	False	AATAGA	-11	NA	96615020	96591649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33652.8	chr8	-	1195	9	NIC	ENSMUSG00000031672.9	novel	639	4	NA	NA	24	-2038	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	206.607682274885	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACTGTGTAAGGAGCAA	NA	False	NA	NA	False	AATAAA	-13	NA	96614996	96593722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_96593836_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33652.9	chr8	-	1310	8	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	127	5162	-28	176	5prime_fragment	FALSE	canonical	3	549	junction_7	40.4772548879652	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAGTTCAGTTGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	96615048	96595923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ES.33653.1	chr8	-	174	1	Intergenic	novelGene_27388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAATTGTGATAA	NA	False	NA	NA	False	NA	NA	NA	96642484	96642310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96642300_96642500
ES.33654.1	chr8	-	205	1	Intergenic	novelGene_27389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAACAAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	96643759	96643554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96643600_96643800
ES.33655.1	chr8	-	297	1	Intergenic	novelGene_27390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAGAAATATATC	NA	False	NA	NA	False	NA	NA	NA	96645288	96644991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96645000_96645300
ES.33656.1	chr8	-	136	1	Intergenic	novelGene_27391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	96645538	96645402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_96645400_96645500
ES.33657.1	chr8	+	178	1	Intergenic	novelGene_27392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCCCATTCAA	NA	False	NA	NA	False	NA	NA	NA	96687010	96687188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_96687000_96687200
ES.33658.1	chr8	-	176	1	Intergenic	novelGene_27393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTAAGCTTACA	NA	False	NA	NA	False	NA	NA	NA	97005855	97005679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_97005700_97005900
ES.33659.1	chr8	+	3200	1	Intergenic	novelGene_27394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGTTCCATAGAGT	NA	False	NA	NA	False	NA	NA	NA	97870005	97873205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_97870000_97873200
ES.3366.1	chr10	-	3429	3	NNC	ENSMUSG00000048240.15	novel	875	3	NA	NA	42383	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTCGACTCTAAATTAT	7235	False	NA	-2	True	AATAAA	-17	NA	80791641	80784459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80787581_80788664_80788781_80791449
ES.3366.2	chr10	-	3365	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	-8	5	-8	0	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTCGACTCTAAAT	4436	False	NA	-5	True	AATAAA	-14	NA	80850767	80784462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
ES.3366.3	chr10	-	3297	3	NNC	ENSMUSG00000048240.15	novel	875	3	NA	NA	31772	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTCTCGACTCTAA	5394	False	NA	-7	True	AATAAA	-12	NA	80802252	80784464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80787581_80788664_80788781_80802187
ES.3366.4	chr10	-	179	1	Intergenic	novelGene_2593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	8745	False	NA	NA	False	NA	NA	NA	80790131	80789952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80790000_80790100
ES.3366.5	chr10	-	158	1	Intergenic	novelGene_2597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTTTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	80844894	80844736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80844700_80844900
ES.33660.1	chr8	+	3293	1	Intergenic	novelGene_27395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAACAAAATAAATAACAG	NA	False	NA	NA	False	NA	NA	NA	100192901	100196194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_100192900_100196200
ES.33661.1	chr8	+	1688	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	-71	-72	-71	72	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTAGTGCTAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	100757118	100758806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_100757100_100758800
ES.33662.1	chr8	-	1134	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	-75	-105	-75	105	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGCCATTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	103592505	103591371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_103591400_103592500
ES.33662.2	chr8	-	1014	2	Genic_Genomic	ENSMUSG00000063696.8	novel	954	1	NA	NA	-73	66	multi-exon	FALSE	non_canonical	0	0	junction_1	0	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	103592503	103591410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_103591869_103591947
ES.33662.3	chr8	-	1034	2	Genic_Genomic	ENSMUSG00000063696.8	novel	954	1	NA	NA	-71	66	multi-exon	FALSE	non_canonical	0	0	junction_1	0	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	103592501	103591410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_103591551_103591607
ES.33663.1	chr8	+	2417	2	Intergenic	novelGene_27396	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATGGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	104501047	104504463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_104503124_104504122
ES.33664.1	chr8	-	191	1	Intergenic	novelGene_27397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATAACAG	NA	False	NA	NA	False	NA	NA	NA	104821072	104820881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_104820900_104821100
ES.33665.1	chr8	+	178	1	Intergenic	novelGene_27398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGGGGGGGGATGTA	8733	False	NA	NA	False	NA	NA	NA	104971195	104971373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_104971200_104971400
ES.33666.1	chr8	-	10109	8	NIC	ENSMUSG00000035824.8	novel	1507	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	54	junction_4	10.169983846033	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAATTCATTTTCATTC	NA	False	NA	-4	True	AATAAA	-20	NA	104975165	104953326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104963478_104965375_104965466_104967747_104970092_104974278_104974317_104975032
ES.33666.2	chr8	-	2310	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	1	1	1	-1	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTAAATTCATTTTC	NA	False	NA	-8	True	AATAAA	-16	NA	104975182	104953330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ES.33666.3	chr8	-	6488	8	NIC	ENSMUSG00000035824.8	novel	2312	9	NA	NA	6	-2	intron_retention	FALSE	canonical	3	18	junction_4	19.635453150059	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATGTAAATTCATTTT	NA	False	NA	-9	True	AATAAA	-15	NA	104975174	104953331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104974317_104975032
ES.33666.4	chr8	-	3270	6	ISM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	6158	2	1055	-2	3prime_fragment	FALSE	canonical	3	18	junction_4	23.0008695487801	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATGTAAATTCATTTT	NA	False	NA	-9	True	AATAAA	-15	NA	104969025	104953331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747
ES.33666.5	chr8	-	2251	8	FSM	ENSMUSG00000035824.8	ENSMUST00000212209.2	756	8	15	-1510	0	-5	multi-exon	FALSE	canonical	1	4	junction_7	28.0021865035499	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGATGTAAATTCAT	NA	False	NA	-12	True	AATAAA	-12	NA	104975165	104953334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104975032
ES.33666.6	chr8	-	2372	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	16	18	6	-5	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGATGTAAATTCAT	NA	False	NA	-12	True	AATAAA	-12	NA	104975174	104953334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ES.33666.7	chr8	-	2430	11	NNC	ENSMUSG00000035824.8	novel	1507	11	NA	NA	2	-6	intron_retention	FALSE	canonical	1	1	junction_10	27.0695400773637	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCATGATGTAAATTCA	NA	False	NA	-13	True	AATAAA	-11	NA	104975162	104953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104974657_104974729_104975032
ES.33666.8	chr8	-	1416	10	NIC	ENSMUSG00000035824.8	novel	1507	11	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.026735734166	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCTAAACCATGATGTAA	NA	False	NA	-18	True	AATAAA	-6	NA	104975161	104953340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_104953973_104954835_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ES.33666.9	chr8	-	1360	7	ISM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	41	3023	22	562	5prime_fragment	FALSE	canonical	3	18	junction_2	21.9823161250634	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104975142	104956352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ES.33667.1	chr8	+	3862	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	12	-2570	2	-342	multi-exon	FALSE	canonical	3	282	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGTTAATGGCTTCA	4825	False	NA	NA	False	NA	NA	NA	104977525	104987576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916
ES.33667.10	chr8	+	838	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	50	416	2	-416	multi-exon	FALSE	canonical	3	282	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTTTCTCATACAATA	4863	False	NA	NA	False	NA	NA	NA	104977563	104984590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916
ES.33667.11	chr8	+	5303	3	NIC	ENSMUSG00000054400.17	novel	750	5	NA	NA	21	1	intron_retention	FALSE	canonical	2	11	junction_2	135.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTGCAGATCTCC	4896	False	NA	8	True	ATTAAA	-20	NA	104977596	104990077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_104977728_104983916_104988914_104989902
ES.33667.12	chr8	+	627	5	FSM	ENSMUSG00000054400.17	ENSMUST00000212410.2	750	5	120	3	68	0	multi-exon	FALSE	canonical	2	9	junction_3	127.002706664071	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTCTGCAGATCTC	4943	False	NA	7	True	ATTAAA	-19	NA	104977643	104990076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104988799_104988914_104989902
ES.33667.13	chr8	+	735	1	NIC	ENSMUSG00000054400.17	novel	1804	3	NA	NA	1016	450	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGTAGCATTTTTCAC	NA	False	NA	NA	False	NA	NA	NA	104989794	104990529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_104989800_104990500
ES.33667.2	chr8	+	4207	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	16	-2919	-5	7	multi-exon	FALSE	canonical	3	282	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGGGAATTGCTCCCA	4829	False	NA	NA	False	AATAAA	-16	NA	104977529	104987925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916
ES.33667.3	chr8	+	628	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	38	1	-4	-1	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCTGCAGATCTCCT	4830	False	NA	9	True	ATTAAA	-21	NA	104977530	104990078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ES.33667.4	chr8	+	4652	3	NIC	ENSMUSG00000054400.17	novel	525	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_2	24.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTCTGCAGATCTC	4834	False	NA	7	True	ATTAAA	-19	NA	104977534	104990076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_104977728_104983916_104988202_104989902
ES.33667.5	chr8	+	5277	4	NNC	ENSMUSG00000054400.17	novel	750	5	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	4.78423336480244	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCTGCAGATCTCCT	4837	False	NA	9	True	ATTAAA	-21	NA	104977537	104990078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_104978240_104983916_104988202_104988799_104988914_104989902
ES.33667.6	chr8	+	3222	3	FSM	ENSMUSG00000054400.17	ENSMUST00000212939.2	737	3	-37	-2448	4	-342	multi-exon	FALSE	canonical	0	0	junction_2	141	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGTTAATGGCTTCA	4838	False	NA	NA	False	NA	NA	NA	104977538	104987576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916_104984076_104984702
ES.33667.7	chr8	+	5103	3	NNC	ENSMUSG00000054400.17	novel	667	4	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	116.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTCTGCAGATCTC	4839	False	NA	7	True	ATTAAA	-19	NA	104977539	104990076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_104978184_104983916_104988202_104989902
ES.33667.8	chr8	+	1118	4	NNC	ENSMUSG00000054400.17	novel	667	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.268527300496	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTCTGCAGATCTC	4850	False	NA	7	True	ATTAAA	-19	NA	104977550	104990076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_104978240_104983916_104984076_104988105_104988202_104989902
ES.33667.9	chr8	+	6327	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	48	-5071	0	1	multi-exon	FALSE	canonical	3	282	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTGCAGATCTCC	4861	False	NA	8	True	ATTAAA	-20	NA	104977561	104990077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_104977728_104983916
ES.33668.1	chr8	-	221	1	Intergenic	novelGene_27399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	104980575	104980354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_104980400_104980600
ES.33669.1	chr8	+	178	1	Intergenic	novelGene_27402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	105025912	105026090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105025900_105026100
ES.33669.10	chr8	+	179	1	Intergenic	novelGene_27405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCATGT	NA	False	NA	NA	False	NA	NA	NA	105099079	105099258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105099100_105099300
ES.33669.11	chr8	+	157	1	Intergenic	novelGene_27406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	105103017	105103174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105103000_105103200
ES.33669.2	chr8	+	177	2	Antisense	novelGene_ENSMUSG00000110600.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACCCA	NA	False	NA	NA	False	NA	NA	NA	105025912	105103192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_105026060_105103162
ES.33669.3	chr8	+	1602	6	FSM	ENSMUSG00000031875.8	ENSMUST00000212081.2	850	6	-31	-721	-31	-1	multi-exon	FALSE	canonical	0	0	junction_1	15.7784663386528	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105066918	105074303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105066992_105067311_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ES.33669.4	chr8	+	1560	6	NIC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	-46	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	15.4090882274066	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105067112	105074303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105067144_105067311_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ES.33669.5	chr8	+	2277	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	-88	-573	-21	573	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATACAGTATTCATTAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	105067137	105074877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ES.33669.6	chr8	+	1595	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	20	1	20	-1	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105067245	105074303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ES.33669.7	chr8	+	2354	4	NIC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	2	-1	intron_retention	FALSE	canonical	3	32	junction_1	7.54247233265651	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105067349	105074303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105067528_105070389_105071505_105071903_105072025_105073363
ES.33669.8	chr8	+	2970	3	NIC	ENSMUSG00000031875.8	novel	1616	5	NA	NA	1784	-1	intron_retention	FALSE	canonical	3	34	junction_1	7	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGGAGTGCGCCTGAC	NA	False	NA	12	True	ATTAAA	-14	NA	105069131	105074303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105070546_105071408_105072025_105073363
ES.33669.9	chr8	+	209	1	Intergenic	novelGene_27404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCTGGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	105098861	105099070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105098900_105099100
ES.3367.1	chr10	-	189	1	Intergenic	novelGene_2598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTCCCAC	1306	False	NA	NA	False	NA	NA	NA	80853897	80853708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80853700_80853900
ES.33670.1	chr8	-	177	1	Intergenic	novelGene_27400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105001895	105001718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105001700_105001900
ES.33670.2	chr8	-	176	2	Intergenic	novelGene_27401	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105137194	105001719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105001846_105137144
ES.33670.3	chr8	-	169	1	Intergenic	novelGene_27403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	105069043	105068874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105068900_105069000
ES.33670.4	chr8	-	7725	5	NNC	ENSMUSG00000096188.2	novel	7734	4	NA	NA	-50	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.8804124631572	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTTTAGTCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	105122489	105074822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105076861_105076919_105081924_105082893_105082993_105084329_105084507_105122082
ES.33670.5	chr8	-	7808	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-74	0	-74	0	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTTTAGTCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	105122513	105074822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
ES.33670.6	chr8	-	7665	5	NNC	ENSMUSG00000096188.2	novel	7734	4	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.8804124631572	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTTTAGTCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	105122430	105074822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105076838_105076897_105081924_105082893_105082993_105084329_105084507_105122082
ES.33670.8	chr8	-	1211	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	-62	6585	-62	-6585	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATGTCACAAGACAGG	NA	False	NA	NA	False	AATAAA	-17	NA	105122501	105081407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
ES.33671.1	chr8	+	260	1	Intergenic	novelGene_27408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105160217	105160477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105160200_105160500
ES.33672.1	chr8	+	2923	1	FSM	ENSMUSG00000110689.2	ENSMUST00000211988.2	1203	1	455	-2175	455	2175	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTTGACAGTGCCCAAA	NA	False	NA	NA	False	NA	NA	NA	105165346	105168269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105165300_105168300
ES.33673.1	chr8	-	4434	1	Genic_Genomic	ENSMUSG00000035770.9	novel	NA	NA	NA	NA	2489	1200	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAAATGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	105147545	105143111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_105143100_105147500
ES.33673.10	chr8	-	4571	13	NNC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.9172465168641	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	1813	False	NA	-3	True	AATAAA	-18	NA	105169634	105144313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152599_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.11	chr8	-	5065	4	NNC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	-4301	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	70.5045309812702	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTTTTGGTGACTTT	NA	False	NA	-4	True	AATAAA	-17	NA	105154335	105144314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105144753_105147437_105150260_105152070_105152131_105152590
ES.33673.12	chr8	-	4335	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	96	196	-43	-196	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGTCTCTCTGCT	1864	False	NA	NA	False	NA	NA	NA	105169583	105144507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.13	chr8	-	3708	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	218	701	79	-701	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATTAATTCTATTTGC	1986	False	NA	NA	False	AATAAA	-19	NA	105169461	105145012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.14	chr8	-	3369	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	8	1250	8	-1250	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTGTTGTTGTTAT	1776	False	NA	-5	True	AATATA	-21	NA	105169671	105145561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.15	chr8	-	4418	8	NNC	ENSMUSG00000035770.9	novel	1780	14	NA	NA	-7120	-1251	intron_retention	FALSE	non_canonical	0	0	junction_1	72.8420152362184	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTTGTTGTTGTTA	NA	False	NA	-6	True	AATATA	-20	NA	105157154	105145562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105147315_105147916_105148036_105148918_105150631_105151759_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032
ES.33673.16	chr8	-	4724	10	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	97	-1251	intron_retention	FALSE	canonical	3	129	junction_5	7.4236858171067	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTTTTGTTGTTGTTA	2168	False	NA	-6	True	AATATA	-20	NA	105169279	105145562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105147315_105148918_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105157203_105163994_105164226_105167105_105167223_105169105
ES.33673.19	chr8	-	3583	13	NNC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	-68	-1257	intron_retention	TRUE	canonical	0	0	junction_3	55.4383416258299	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCAGTTTTTTTTGTTG	2003	False	NA	-12	True	AATATA	-14	NA	105169444	105145568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105147315_105148918_105149036_105149744_105150260_105151855_105151949_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.2	chr8	-	5094	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	229	-696	-74	696	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGGCAGTGGTGGCA	1997	False	NA	NA	False	NA	NA	NA	105169450	105143615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.20	chr8	-	2865	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	229	1533	-74	1127	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTGGAGTTTACTCT	1997	False	NA	NA	False	TATAAA	-38	NA	105169450	105145844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.22	chr8	-	2441	9	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	36	-36	intron_retention	FALSE	canonical	3	129	junction_4	8.25757228245687	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGTGAGATGCACATTT	4297	False	NA	-8	True	AATACA	-20	NA	105167150	105147062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105147315_105148918_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105
ES.33673.23	chr8	-	1878	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	-4	2753	-4	-38	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAGTGTGAGATGCACAT	1764	False	NA	-10	True	AATACA	-18	NA	105169683	105147064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.24	chr8	-	1630	13	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	-69	-40	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	40.4275758472962	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGAGTGTGAGATGCAC	2002	False	NA	-12	True	AATACA	-16	NA	105169445	105147066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105147307_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.25	chr8	-	1917	12	NIC	ENSMUSG00000035770.9	novel	1780	14	NA	NA	-65	0	intron_retention	FALSE	canonical	3	129	junction_5	10.5579862843331	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGCACATGCTGTCAGT	2006	False	NA	-84	True	NA	NA	NA	105169441	105147138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105147315_105148918_105149036_105149744_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.26	chr8	-	3125	12	ISM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	34	3072	2	-245	5prime_fragment	FALSE	canonical	3	129	junction_5	11.139238960903	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTATTTTGTGTTTGTT	1802	False	NA	NA	False	NA	NA	NA	105169645	105147383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.27	chr8	-	189	1	Intergenic	novelGene_27407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATCCTCCTGCCTCTGA	NA	False	NA	NA	False	NA	NA	NA	105151417	105151228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105151200_105151400
ES.33673.3	chr8	-	4628	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	0	-1	0	1	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGGTGACTTTGTTT	1768	False	NA	0	True	AATAAA	-21	NA	105169679	105144310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.4	chr8	-	7262	10	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	129	junction_3	10.8092324506803	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGGTGACTTTGTT	1801	False	NA	-1	True	AATAAA	-20	NA	105169646	105144311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.6	chr8	-	6177	12	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	20	-2	intron_retention	FALSE	canonical	3	129	junction_5	11.139238960903	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	1820	False	NA	-3	True	AATAAA	-18	NA	105169627	105144313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.7	chr8	-	6349	11	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	-68	-2	intron_retention	FALSE	canonical	3	129	junction_4	10.846197490365	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	2003	False	NA	-3	True	AATAAA	-18	NA	105169444	105144313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105149036_105149744_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.8	chr8	-	2383	14	NNC	ENSMUSG00000035770.9	novel	1780	14	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.4139819966853	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	2003	False	NA	-3	True	AATAAA	-18	NA	105169444	105144313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105145114_105147120_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33673.9	chr8	-	4749	12	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	-72	-2	intron_retention	FALSE	canonical	3	129	junction_5	10.5579862843331	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTTTGGTGACTTTG	1999	False	NA	-3	True	AATAAA	-18	NA	105169448	105144313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105147315_105148918_105149036_105149744_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ES.33674.1	chr8	+	2232	1	Antisense	novelGene_ENSMUSG00000052616.11_AS_novelGene_ENSMUSG00000031878.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	9054	False	NA	NA	False	NA	NA	NA	105235874	105238106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_105235900_105238100
ES.33675.1	chr8	-	3725	17	NIC	ENSMUSG00000052616.11	novel	2810	18	NA	NA	4	-7	intron_retention	FALSE	canonical	0	0	junction_2	0.916429893663449	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGAGATGATTCCTCC	NA	False	NA	NA	False	AATAAA	-15	NA	105236510	105173357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105174677_105178426_105178493_105179256_105179407_105195359_105195453_105195742_105195805_105199317_105199671_105208804_105208960_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598_105224728_105225124_105225236_105234421_105234479_105235997
ES.33675.2	chr8	-	215	1	Intergenic	novelGene_27409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGACTATTAGGGTG	NA	False	NA	NA	False	NA	NA	NA	105210503	105210288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105210300_105210500
ES.33676.1	chr8	-	5471	13	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	184	3	intron_retention	FALSE	canonical	3	645	junction_12	58.123192922925	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTTGTCTGGAATGG	765	False	NA	NA	False	AATAAA	-22	NA	105254363	105237656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105253795_105254009
ES.33676.10	chr8	-	1621	18	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	18	junction_1	175.536981385434	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3353	False	NA	NA	False	AATAAA	-17	NA	105261249	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.11	chr8	-	1770	19	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	243.815554654247	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3374	False	NA	NA	False	AATAAA	-17	NA	105261228	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243403_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105256687_105256749_105257024_105257129_105261143
ES.33676.12	chr8	-	4595	17	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_13	190.521939353451	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3360	False	NA	NA	False	AATAAA	-17	NA	105261242	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251103_105252911_105253022_105253714_105256749_105257024_105257129_105261143
ES.33676.13	chr8	-	1511	16	NIC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	196.122025506797	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3335	False	NA	NA	False	AATAAA	-17	NA	105261267	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105256687_105256749_105257024_105257129_105261143
ES.33676.14	chr8	-	1767	19	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	181.135683404649	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3357	False	NA	NA	False	AATAAA	-17	NA	105261245	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254098_105256687_105256749_105257024_105257129_105261143
ES.33676.15	chr8	-	3042	7	NIC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	-2516	-2	intron_retention	FALSE	canonical	3	707	junction_4	60.5906116673385	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	7937	False	NA	NA	False	AATAAA	-17	NA	105247191	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105244896_105246176_105246311_105246395
ES.33676.16	chr8	-	4508	17	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	12	-2	intron_retention	FALSE	canonical	3	687	junction_5	49.8738643354413	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3374	False	NA	NA	False	AATAAA	-17	NA	105261228	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.17	chr8	-	6027	13	ISM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	5387	2	-1002	-2	intron_retention	FALSE	canonical	3	687	junction_5	52.0949986936259	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	8721	False	NA	NA	False	AATAAA	-17	NA	105255881	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966
ES.33676.18	chr8	-	1756	19	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_16	180.03728180437	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3352	False	NA	NA	False	AATAAA	-17	NA	105261250	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105256687_105256749_105257024_105257129_105261143
ES.33676.19	chr8	-	4216	17	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	7	junction_7	189.65293136411	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3364	False	NA	NA	False	AATAAA	-17	NA	105261238	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105256749_105257024_105257129_105261143
ES.33676.2	chr8	-	1829	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	-18	-3	-18	3	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTTGTCTGGAATGG	3315	False	NA	NA	False	AATAAA	-22	NA	105261287	105237656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.20	chr8	-	1698	18	NNC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	185.532283912268	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3374	False	NA	NA	False	AATAAA	-17	NA	105261228	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253802_105256658_105256749_105257024_105257129_105261143
ES.33676.21	chr8	-	1592	18	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	20	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	247.98469368995	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3382	False	NA	NA	False	AATAAA	-17	NA	105261220	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105256687_105256749_105257024_105257129_105261143
ES.33676.22	chr8	-	1696	19	NNC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	231.562386602161	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3356	False	NA	NA	False	AATAAA	-17	NA	105261246	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246296_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.23	chr8	-	6757	14	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	10	-2	intron_retention	FALSE	canonical	3	691	junction_11	47.7324892766382	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3372	False	NA	NA	False	AATAAA	-17	NA	105261230	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105239882_105239972_105240088_105242760_105242854_105243279_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.24	chr8	-	1731	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	2	2	2	-2	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3336	False	NA	NA	False	AATAAA	-17	NA	105261266	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.25	chr8	-	4514	16	NNC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	1	3	intron_retention	FALSE	non_canonical	0	0	junction_3	304.12545656905	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATAGTCTTGTTGTCTG	3335	False	NA	NA	False	AATAAA	-16	NA	105261267	105237662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242774_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246484_105246614_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105256749_105257024_105257129_105261143
ES.33676.27	chr8	-	2578	14	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	-216	3	intron_retention	FALSE	canonical	3	7	junction_7	208.027365063793	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATAGTCTTGTTGTCTG	9507	False	NA	NA	False	AATAAA	-16	NA	105255095	105237662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714
ES.33676.3	chr8	-	4808	16	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	196.243386300447	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3366	False	NA	NA	False	AATAAA	-19	NA	105261236	105237659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246614_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105256749_105257024_105257129_105261143
ES.33676.30	chr8	-	1243	15	ISM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	32	6827	3	-318	5prime_fragment	FALSE	canonical	3	645	junction_10	42.0636665165595	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGGGAGTTTTAAAT	3365	False	NA	NA	False	AATAAA	-17	NA	105261237	105244486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.31	chr8	-	3018	1	Genic_Genomic	ENSMUSG00000031878.19	novel	NA	NA	NA	NA	-1	-3591	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTTTTAGAATGCA	3332	False	NA	NA	False	NA	NA	NA	105261270	105258252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_105258300_105261300
ES.33676.4	chr8	-	1713	19	NNC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	232.377147948951	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTCTTGTTGTCTGGA	3353	False	NA	NA	False	AATAAA	-18	NA	105261249	105237660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250263_105250960_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ES.33676.7	chr8	-	4572	17	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	1	-2	intron_retention	FALSE	canonical	3	687	junction_5	45.6805740304344	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3357	False	NA	NA	False	AATAAA	-17	NA	105261245	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105256749_105257024_105257129_105261143
ES.33676.9	chr8	-	4350	18	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	2	-2	intron_retention	FALSE	canonical	3	645	junction_15	52.6342080931374	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	3364	False	NA	NA	False	AATAAA	-17	NA	105261238	105237661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105256749_105257024_105257129_105261143
ES.33677.1	chr8	+	200	1	Intergenic	novelGene_27410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGATAGTAGTAGTAATAG	8644	False	NA	NA	False	NA	NA	NA	105288012	105288212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105288000_105288200
ES.33678.1	chr8	-	184	1	Intergenic	novelGene_27411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATCTTTCTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	105305680	105305496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105305500_105305700
ES.33679.1	chr8	-	199	1	Intergenic	novelGene_27412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTCTTTTTTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	105309346	105309147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105309100_105309300
ES.3368.1	chr10	-	3698	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	95	3	-23	0	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTATTTGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	80873165	80864374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
ES.3368.2	chr10	-	5057	4	NNC	ENSMUSG00000046822.15	novel	3796	4	NA	NA	-14	-1	intron_retention	FALSE	canonical	0	0	junction_3	28.2488937836511	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTATTTGTTTTTT	NA	False	NA	NA	False	TTTAAA	-2	NA	80873098	80864375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80867535_80869445_80869768_80870751_80870840_80871610
ES.3368.4	chr10	-	3535	3	NIC	ENSMUSG00000046822.15	novel	3796	4	NA	NA	-11	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTTATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	80873095	80864379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80867535_80869445_80869768_80873037
ES.3368.5	chr10	-	3767	5	NIC	ENSMUSG00000046822.15	novel	3680	4	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.2435890410189	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTTATTTATTTGTT	NA	False	NA	NA	False	NA	NA	NA	80873111	80864379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80867535_80869445_80869768_80870751_80870844_80872821_80872946_80873037
ES.3368.6	chr10	-	1440	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	98	2258	-20	-2255	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGTGGCCATGTC	NA	False	NA	-4	True	TTTAAA	-22	NA	80873162	80866629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
ES.3368.8	chr10	-	1575	4	NIC	ENSMUSG00000046822.15	novel	3680	4	NA	NA	5	-2257	intron_retention	FALSE	canonical	0	0	junction_3	28.2488937836511	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCTGTGTGGCCATG	NA	False	NA	-6	True	TTTAAA	-20	NA	80873079	80866631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80867535_80869445_80869768_80870751_80870844_80872821
ES.33680.1	chr8	+	2267	4	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.5269119345812	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCCTTTAGTTCGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	105318076	105325660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320111_105321701_105322449_105322555_105325238
ES.33680.10	chr8	+	5629	2	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCCTTTAGTTCGA	NA	False	NA	NA	False	AATAAA	-16	NA	105318105	105325658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320151
ES.33680.11	chr8	+	2962	3	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	79	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	34.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATTTGGCTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	105318161	105325649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320111_105322597_105325238
ES.33680.12	chr8	+	3157	2	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	4357	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCCTTTAGTTCGA	NA	False	NA	NA	False	AATAAA	-16	NA	105322439	105325658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105323165_105323226
ES.33680.2	chr8	+	5703	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	-6	-5	-6	5	multi-exon	FALSE	canonical	3	69	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTTAGTTCGAACGTT	NA	False	NA	NA	False	AATAAA	-21	NA	105318076	105325663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105318228_105320111
ES.33680.3	chr8	+	2159	2	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	-1	-3494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTGCAGATTTTACAGA	NA	False	NA	NA	False	AATAAA	-23	NA	105318081	105322164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320151
ES.33680.4	chr8	+	2199	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	0	3493	0	-3493	multi-exon	FALSE	canonical	3	69	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGCAGATTTTACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	105318082	105322165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105318228_105320111
ES.33680.5	chr8	+	2127	3	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAATTTGGCTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	105318100	105325649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320111_105321701_105325238
ES.33680.6	chr8	+	5024	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	18	650	18	-650	multi-exon	FALSE	canonical	3	69	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGATGCTGTAATATATG	NA	False	NA	NA	False	ATTAAA	-22	NA	105318100	105325008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105318228_105320111
ES.33680.7	chr8	+	3514	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	18	2160	18	-2160	multi-exon	FALSE	canonical	3	69	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCGGGCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	105318100	105323498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105318228_105320111
ES.33680.8	chr8	+	2071	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	19	3602	19	-3602	multi-exon	FALSE	canonical	3	69	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTAGCCCATGTCCTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	105318101	105322056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105318228_105320111
ES.33680.9	chr8	+	3473	2	NNC	ENSMUSG00000048371.9	novel	5692	2	NA	NA	19	-2160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCGGGCAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	105318101	105323498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105318228_105320151
ES.33681.1	chr8	-	2000	1	Antisense	novelGene_ENSMUSG00000048371.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCCTAATGTCTTTGTC	2330	False	NA	NA	False	NA	NA	NA	105323961	105321961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_105322000_105324000
ES.33682.1	chr8	-	128	1	ISM	ENSMUSG00000031881.7	ENSMUST00000212318.2	586	2	11226	0	11226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	105328670	105328542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_105328500_105328700
ES.33683.1	chr8	+	7859	1	Antisense	novelGene_ENSMUSG00000031881.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	8022	False	NA	NA	False	NA	NA	NA	105334452	105342311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_105334500_105342300
ES.33684.1	chr8	-	668	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	327.680484618782	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTAGCGTCTCTCAT	NA	False	NA	-2	True	AATAAA	-26	NA	105368349	105366471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368021_105368178
ES.33684.4	chr8	-	666	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	327.680484618782	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCAGTATGCCTTAGC	NA	False	NA	-11	True	AATAAA	-17	NA	105368358	105366480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368015_105368174
ES.33684.5	chr8	-	1230	3	NIC	ENSMUSG00000031879.15	novel	807	4	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	675	junction_1	52.5	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCAGTATGCCTTAGC	NA	False	NA	-11	True	AATAAA	-17	NA	105368360	105366480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105366719_105367151_105367726_105367942
ES.33684.6	chr8	-	684	5	NNC	ENSMUSG00000031879.15	novel	918	5	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	389.073579159521	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCCCAGTATGCCTTA	NA	False	NA	-13	True	AATAAA	-15	NA	105368346	105366482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105366719_105367121_105367198_105367599_105367726_105367942_105368021_105368178
ES.33685.1	chr8	+	173	1	Intergenic	novelGene_27413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAGAGCGAACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	105371553	105371726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105371600_105371700
ES.33686.1	chr8	+	160	1	Intergenic	novelGene_27414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	265	False	NA	NA	False	NA	NA	NA	105860913	105861073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105860900_105861100
ES.33687.1	chr8	+	1451	1	NIC	ENSMUSG00000060560.9	novel	2433	14	NA	NA	14405	-2454	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105872836	105874287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105872800_105874300
ES.33688.1	chr8	+	2011	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-247	-585	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	77.8470294873221	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAGTCGTGCATGAT	3499	False	NA	25	True	AATAAA	-14	NA	105897058	105944028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897160_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.10	chr8	+	1971	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-133	-584	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	72.45798782743	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAGTCGTGCATGATA	3613	False	NA	26	True	AATAAA	-15	NA	105897172	105944029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.11	chr8	+	3037	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	-138	-8	-123	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3623	False	NA	82	True	ATTAAA	-22	NA	105897182	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.12	chr8	+	2908	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	-25	0	-25	0	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3721	False	NA	82	True	ATTAAA	-22	NA	105897280	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.13	chr8	+	2326	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	-14	579	1	-579	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCGTGCATGATAAGGAT	3747	False	NA	31	True	AATAAA	-20	NA	105897306	105944034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.14	chr8	+	2598	4	NIC	ENSMUSG00000031885.15	novel	2709	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	80.3755076016458	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	3810	False	NA	74	True	ATTAAA	-14	NA	105897369	105944613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105897686_105897937_105898025_105905224_105905342_105942535
ES.33688.15	chr8	+	2702	5	FSM	ENSMUSG00000031885.15	ENSMUST00000109394.3	2487	5	-207	-8	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	80.5741118474166	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3810	False	NA	82	True	ATTAAA	-22	NA	105897369	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105897686_105897937_105898025_105921106_105921224_105929083_105929180_105942535
ES.33688.17	chr8	+	2289	3	NIC	ENSMUSG00000031885.15	novel	2883	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	85	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4010	False	NA	82	True	ATTAAA	-22	NA	105897569	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105897686_105897937_105898025_105942535
ES.33688.18	chr8	+	2521	5	NIC	ENSMUSG00000031885.15	novel	2891	6	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	66.951474965082	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAGTCATGACTCT	4013	False	NA	73	True	ATTAAA	-13	NA	105897572	105944612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105897686_105897937_105898025_105905224_105905342_105929083_105929211_105942535
ES.33688.2	chr8	+	2635	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-236	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	76.1876630433038	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3510	False	NA	82	True	ATTAAA	-22	NA	105897069	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.20	chr8	+	1991	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	296	596	25	-588	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTTGAAGTCGTGCAT	4042	False	NA	22	True	AATAAA	-11	NA	105897601	105944025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.21	chr8	+	2610	5	ISM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	533	0	113	0	3prime_fragment	FALSE	canonical	3	129	junction_4	29.7363414023985	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	4294	False	NA	74	True	ATTAAA	-14	NA	105897853	105944613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.22	chr8	+	2508	5	NIC	ENSMUSG00000031885.15	novel	371	3	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	84.4408076702254	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAGTCATGACTCT	4636	False	NA	73	True	ATTAAA	-13	NA	105898195	105944612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105898297_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.23	chr8	+	2540	5	NNC	ENSMUSG00000031885.15	novel	371	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.0502894571372	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	4639	False	NA	82	True	ATTAAA	-22	NA	105898198	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105898292_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.24	chr8	+	4180	2	ISM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	29121	667	28246	-667	3prime_fragment	FALSE	canonical	3	129	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTGTCTTTCATTG	NA	False	NA	-57	True	TATAAA	-13	NA	105926441	105943946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105929211_105942535
ES.33688.25	chr8	+	4565	2	ISM	ENSMUSG00000031885.15	ENSMUST00000109394.3	2487	5	29124	-8	28505	0	3prime_fragment	FALSE	canonical	3	84	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	NA	False	NA	82	True	ATTAAA	-22	NA	105926700	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105929180_105942535
ES.33688.26	chr8	+	4028	2	ISM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	29943	-3	29068	3	3prime_fragment	FALSE	canonical	3	129	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTCATGACTCTTTAT	NA	False	NA	77	True	ATTAAA	-17	NA	105927263	105944616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105929211_105942535
ES.33688.27	chr8	+	7077	2	NNC	ENSMUSG00000031885.15	novel	2487	5	NA	NA	30247	-8969	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105928442	105935644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105931452_105931576
ES.33688.28	chr8	+	164	1	Intergenic	novelGene_27417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	105930148	105930312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105930100_105930300
ES.33688.29	chr8	+	2843	1	NIC	ENSMUSG00000031885.15	novel	2883	6	NA	NA	43573	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAAAGTCATGACTC	9122	False	NA	72	True	ATTAAA	-12	NA	105941768	105944611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105941800_105944600
ES.33688.3	chr8	+	2412	4	NNC	ENSMUSG00000031885.15	novel	2883	6	NA	NA	-236	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0160053620108	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	3510	False	NA	74	True	ATTAAA	-14	NA	105897069	105944613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897160_105905224_105905342_105929083_105929211_105942535
ES.33688.4	chr8	+	2621	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.3220021258846	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3513	False	NA	82	True	ATTAAA	-22	NA	105897072	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897160_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.5	chr8	+	2032	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-231	-579	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	74.3220021258846	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCGTGCATGATAAGGAT	3515	False	NA	31	True	AATAAA	-20	NA	105897074	105944034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897160_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.6	chr8	+	2579	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	77.8470294873221	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	3516	False	NA	74	True	ATTAAA	-14	NA	105897075	105944613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897160_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33688.7	chr8	+	2540	5	NNC	ENSMUSG00000031885.15	novel	2883	6	NA	NA	-207	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.0502894571372	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACAAAGTCATGACTC	3539	False	NA	72	True	ATTAAA	-12	NA	105897098	105944611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897202_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.8	chr8	+	2624	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-194	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	72.45798782743	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3552	False	NA	82	True	ATTAAA	-22	NA	105897111	105944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ES.33688.9	chr8	+	1872	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-146	-665	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	76.1876630433038	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTCTTTCATTGTA	3600	False	NA	-55	True	TATAAA	-15	NA	105897159	105943948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ES.33689.1	chr8	+	3016	16	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_12	66.0092922751537	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951766	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.10	chr8	+	4232	13	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-19	-4	intron_retention	FALSE	canonical	2	10	junction_5	73.4107545860202	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951818	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105967472_105967571_105967658_105967772_105973052_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.11	chr8	+	2596	13	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.4522591254885	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951823	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.12	chr8	+	4073	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-14	0	intron_retention	FALSE	canonical	3	239	junction_8	14.0467513856335	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951823	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.13	chr8	+	2878	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.019031191887	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951838	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973028_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.14	chr8	+	2768	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	68.5148576170579	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951841	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.15	chr8	+	3960	14	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	4	0	intron_retention	FALSE	canonical	2	10	junction_4	69.5984254735864	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951841	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.16	chr8	+	2898	17	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	88.3637501679846	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951848	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966142_105966201_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.17	chr8	+	2987	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.7617148851259	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951848	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957702_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.18	chr8	+	4026	15	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	11	-2	intron_retention	FALSE	canonical	3	7	junction_9	69.5237442922068	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGCTGTTGATTTCC	NA	False	NA	NA	False	NA	NA	NA	105951848	105979683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973197_105973469_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.19	chr8	+	6092	12	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	13	0	intron_retention	TRUE	non_canonical	0	0	junction_4	77.7564538524133	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951850	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105967191_105967401_105967772_105973052_105973187_105973469_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.2	chr8	+	2867	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	71.1950826667009	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGAGCTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	105951776	105979680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976228_105976288_105977350_105977424_105978229
ES.33689.20	chr8	+	2845	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	67.202645450574	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951853	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973197_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.22	chr8	+	2731	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	22	-7	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	68.0405416360161	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGTGAGCTGTTGA	NA	False	NA	NA	False	NA	NA	NA	105951859	105979678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.23	chr8	+	4924	13	NIC	ENSMUSG00000031889.10	novel	2937	14	NA	NA	25	-4	intron_retention	FALSE	canonical	3	239	junction_7	14.7554133192609	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951862	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350
ES.33689.24	chr8	+	3887	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	27	-4	intron_retention	FALSE	canonical	3	239	junction_9	15.2214939329561	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951864	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105977424_105978229
ES.33689.25	chr8	+	4784	13	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	28	0	intron_retention	FALSE	canonical	3	239	junction_8	16.1458198924675	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951865	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228
ES.33689.26	chr8	+	4833	14	FSM	ENSMUSG00000031889.10	ENSMUST00000156561.8	2937	14	28	-1924	28	-4	multi-exon	FALSE	canonical	3	239	junction_8	14.5728124912566	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951865	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350
ES.33689.27	chr8	+	3723	15	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	28	0	intron_retention	FALSE	canonical	3	12	junction_12	68.2130889947383	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951865	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350
ES.33689.28	chr8	+	2801	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.2667968748758	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951865	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966324_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.29	chr8	+	3550	15	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_14	71.1970891975513	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTACAGCCTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	105951866	105979386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977133
ES.33689.3	chr8	+	2915	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	1	0	1	0	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951777	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.30	chr8	+	2612	16	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-30	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	66.0092922751537	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATGTACAGCCTCATC	NA	False	NA	NA	False	NA	NA	NA	105951868	105979383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.31	chr8	+	4281	14	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-30	0	intron_retention	FALSE	canonical	3	254	junction_8	10.7807630560645	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951868	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.32	chr8	+	4230	15	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-25	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	94.5103654826997	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951873	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967571_105967664_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977133_105977424_105978229
ES.33689.33	chr8	+	2637	15	NNC	ENSMUSG00000031889.10	novel	2460	15	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.4973946544213	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105951954	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966706_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.34	chr8	+	2950	1	Intergenic	novelGene_27419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGATGATGTATGCAGG	NA	False	NA	NA	False	NA	NA	NA	105952230	105955180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_105952200_105955200
ES.33689.35	chr8	+	6456	15	ISM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	2097	4	1975	-4	3prime_fragment	FALSE	canonical	3	239	junction_8	15.0957826249991	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGAGCTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	105953873	105979681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.36	chr8	+	2485	15	ISM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	5773	299	-50	-2	3prime_fragment	FALSE	canonical	3	239	junction_8	15.0957826249991	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTACAGCCTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	105957549	105979386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.37	chr8	+	2531	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	90.5779958562417	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGCCTCATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	105957563	105979388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105957843_105961113_105961198_105965054_105965099_105966142_105966201_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.38	chr8	+	2637	15	NNC	ENSMUSG00000031889.10	novel	707	8	NA	NA	2872	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.0296000385238	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105960471	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105960618_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.39	chr8	+	3370	2	ISM	ENSMUSG00000031889.10	ENSMUST00000133035.2	707	8	2755	-986	2755	-5	intron_retention	FALSE	canonical	3	269	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATGTACAGCCTCATC	4312	False	NA	NA	False	NA	NA	NA	105975879	105979383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105976095_105976228
ES.33689.4	chr8	+	4230	14	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	239	junction_8	14.5752485338153	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951800	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976288_105977350_105977424_105978229
ES.33689.5	chr8	+	3691	15	ISM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	31	0	-30	0	intron_retention	FALSE	canonical	3	239	junction_9	15.210261037087	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951807	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350
ES.33689.6	chr8	+	2025	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	32	859	-29	429	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTCTCCTGTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	105951808	105978826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.7	chr8	+	2901	16	NNC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	68.9308832575549	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951814	105979685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976027_105976095_105976228_105976288_105977350_105977424_105978229
ES.33689.8	chr8	+	2593	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	38	285	-23	12	multi-exon	FALSE	canonical	3	239	junction_9	14.7126551724093	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTATAGTTCATGATG	NA	False	NA	NA	False	NA	NA	NA	105951814	105979400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ES.3369.1	chr10	-	2074	13	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	5	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	422.137286778708	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTCCTGTGTCAGCC	4777	False	NA	-6	True	AATAAA	-22	NA	80896007	80879903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80880943_80881007_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885761_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.13	chr10	-	3092	11	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-2	4	intron_retention	FALSE	canonical	3	688	junction_10	110.572555365244	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4767	False	NA	-7	True	AATAAA	-21	NA	80896017	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.14	chr10	-	3018	11	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-9	3	intron_retention	FALSE	canonical	3	688	junction_10	110.608363155776	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4797	False	NA	-8	True	AATAAA	-20	NA	80895987	80879905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.16	chr10	-	3475	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	6	3	intron_retention	FALSE	canonical	3	688	junction_9	111.362049966941	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTCCTGTGTCAG	4778	False	NA	-8	True	AATAAA	-20	NA	80896006	80879905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884811_80885086_80885192_80885615_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.17	chr10	-	3708	9	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	5	2	intron_retention	FALSE	canonical	3	688	junction_8	94.0211910954121	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	4777	False	NA	-9	True	AATAAA	-19	NA	80896007	80879906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80883511_80884213_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.18	chr10	-	3496	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	13	2	intron_retention	FALSE	canonical	3	688	junction_9	116.197894203311	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	4785	False	NA	-9	True	AATAAA	-19	NA	80895999	80879906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.19	chr10	-	2025	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-2205	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	383.142292795935	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGCTTCCTGTGTCA	NA	False	NA	-9	True	AATAAA	-19	NA	80888087	80879906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886078_80886185_80886832_80886918_80887056_80887164_80887949
ES.3369.2	chr10	-	1992	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	-22	-6	-19	4	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4750	False	NA	-7	True	AATAAA	-21	NA	80896034	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.20	chr10	-	2608	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	364.920686503268	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTCTGCTTCCTGTGTC	4810	False	NA	-10	True	AATAAA	-18	NA	80895974	80879907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80886185_80886832_80886918_80887056_80887164_80887949_80888086_80895751
ES.3369.21	chr10	-	3411	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-9	1	intron_retention	FALSE	canonical	3	688	junction_9	111.530873763587	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTCTGCTTCCTGTGTC	4797	False	NA	-10	True	AATAAA	-18	NA	80895987	80879907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80883511_80884213_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.22	chr10	-	1975	12	NNC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	293.726358289002	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4776	False	NA	-11	True	AATAAA	-17	NA	80896008	80879908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880848_80882020_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.23	chr10	-	4118	9	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	688	junction_8	117.940663047144	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4792	False	NA	-11	True	AATAAA	-17	NA	80895992	80879908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.24	chr10	-	4319	8	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	-16	0	intron_retention	FALSE	canonical	3	688	junction_7	125.982668066132	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4753	False	NA	-11	True	AATAAA	-17	NA	80896031	80879908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.25	chr10	-	1533	6	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	447.949729322387	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4805	False	NA	-13	True	AATAAA	-15	NA	80895979	80879910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882335_80887070_80887164_80887949_80888086_80895751
ES.3369.26	chr10	-	1953	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	293.057013605101	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4773	False	NA	-13	True	AATAAA	-15	NA	80896011	80879910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882137_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.27	chr10	-	7126	3	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	688	junction_2	136.5	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4755	False	NA	-13	True	AATAAA	-15	NA	80896029	80879910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80885716_80886832_80888086_80895961
ES.3369.29	chr10	-	3253	11	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	4	0	intron_retention	FALSE	canonical	3	99	junction_10	272.841272537716	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4810	False	NA	-13	True	AATAAA	-15	NA	80895974	80879910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80886918_80887056_80887164_80887949_80888086_80895751
ES.3369.30	chr10	-	3166	11	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	688	junction_10	110.451618367501	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTCTCTGCTTCCTG	4755	False	NA	-14	True	AATAAA	-14	NA	80896029	80879911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.31	chr10	-	4234	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	688	junction_9	116.398739970271	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTCTCTGCTTCCT	4803	False	NA	-15	True	AATAAA	-13	NA	80895981	80879912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.32	chr10	-	1905	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	53	junction_6	268.286759129046	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCCTCTCTGCTTCCT	4802	False	NA	-15	True	AATAAA	-13	NA	80895982	80879912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885113_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.33	chr10	-	1952	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	293.377538617545	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTGCCTCTCTGCTTCC	4772	False	NA	-16	True	AATAAA	-12	NA	80896012	80879913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883481_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.34	chr10	-	3298	10	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-2205	-3	intron_retention	FALSE	canonical	0	0	junction_5	312.591596452687	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTGCCTCTCTGCTTCC	NA	False	NA	-16	True	AATAAA	-12	NA	80888087	80879913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884546_80884671_80884811_80885086_80885192_80885615_80886918_80887056_80887164_80887949
ES.3369.36	chr10	-	1975	12	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-2205	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	380.829737883215	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTGCCTCTCTGCTTCC	NA	False	NA	-16	True	AATAAA	-12	NA	80888087	80879913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80880943_80881007_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949
ES.3369.37	chr10	-	4506	9	NNC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-9	-4	intron_retention	FALSE	canonical	0	0	junction_4	315.324039679819	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCTGCCTCTCTGCTTC	4797	False	NA	-17	True	AATAAA	-11	NA	80895987	80879914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80880838_80882023_80882147_80882308_80883511_80884213_80884796_80885086_80885192_80885615_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.38	chr10	-	1642	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	4	323	4	-321	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTGATCTCATGGGAA	4776	False	NA	NA	False	NA	NA	NA	80896008	80880231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
ES.3369.39	chr10	-	1167	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	-19	821	-16	-819	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTTTTCCTTCATC	4753	False	NA	NA	False	NA	NA	NA	80896031	80880729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
ES.3369.4	chr10	-	2182	12	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	3	99	junction_11	260.894741448927	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4770	False	NA	-7	True	AATAAA	-21	NA	80896014	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
ES.3369.5	chr10	-	3038	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-4	4	intron_retention	FALSE	canonical	3	688	junction_9	111.244475518263	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4802	False	NA	-7	True	AATAAA	-21	NA	80895982	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.3369.6	chr10	-	3253	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-9	4	intron_retention	FALSE	canonical	3	99	junction_9	282.098398033097	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4797	False	NA	-7	True	AATAAA	-21	NA	80895987	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
ES.3369.7	chr10	-	2015	11	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	12	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	380.830946746716	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4847	False	NA	-7	True	AATAAA	-21	NA	80895937	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80880838_80882023_80882147_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
ES.3369.8	chr10	-	3827	10	NIC	ENSMUSG00000004937.7	novel	1964	12	NA	NA	-2	4	intron_retention	FALSE	canonical	3	688	junction_9	116.347287712369	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTTCCTGTGTCAGC	4804	False	NA	-7	True	AATAAA	-21	NA	80895980	80879904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80882147_80882308_80882399_80883472_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ES.33690.1	chr8	-	2497	1	Intergenic	novelGene_27415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCATAAAAAGGGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	105910012	105907515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105907500_105910000
ES.33690.2	chr8	-	189	2	Antisense	novelGene_ENSMUSG00000084711.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCATAAAAAGGGAGAAAGAA	7556	False	NA	NA	False	NA	NA	NA	105971872	105907515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_105907542_105971709
ES.33690.3	chr8	-	166	1	Intergenic	novelGene_27416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAC	8544	False	NA	NA	False	NA	NA	NA	105925388	105925222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105925200_105925400
ES.33690.4	chr8	-	158	1	Intergenic	novelGene_27418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAATAAAAAAAAAAAAAA	3430	False	NA	NA	False	NA	NA	NA	105939968	105939810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105939800_105940000
ES.33690.5	chr8	-	1996	1	Intergenic	novelGene_27420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATTCAAATTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	105955419	105953423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105953400_105955400
ES.33690.6	chr8	-	1015	2	Antisense	novelGene_ENSMUSG00000031889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATTCAAATTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	105955415	105953423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_105954133_105955109
ES.33690.7	chr8	-	172	1	Intergenic	novelGene_27421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGTTTAAAAAAAA	4588	False	NA	NA	False	NA	NA	NA	105961543	105961371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105961400_105961500
ES.33690.8	chr8	-	176	1	Intergenic	novelGene_27422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	7557	False	NA	NA	False	NA	NA	NA	105971871	105971695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_105971700_105971900
ES.33691.1	chr8	-	2274	2	FSM	ENSMUSG00000069920.11	ENSMUST00000093217.9	2325	2	45	6	45	-6	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATATGTTTCTCTTC	9985	False	NA	NA	False	ATTAAA	-9	NA	105981738	105979276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105981475_105981662
ES.33692.1	chr8	+	1650	3	NNC	ENSMUSG00000033313.12	novel	1901	3	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTGATCTCGAGTCA	1503	False	NA	NA	False	AATAAA	-17	NA	105991252	105995955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105991393_105993601_105993798_105994641
ES.33692.2	chr8	+	1786	5	NNC	ENSMUSG00000033313.12	novel	1913	4	NA	NA	-27	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.48746859276655	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTCCTGTGATCTCG	1503	False	NA	NA	False	AATAAA	-12	NA	105991252	105995950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105991393_105993601_105993798_105993908_105993947_105994395_105994499_105994641
ES.33692.3	chr8	+	1732	4	NNC	ENSMUSG00000033313.12	novel	1913	4	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.62466929133727	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGTCCTGTGATCTCGAG	1521	False	NA	NA	False	AATAAA	-14	NA	105991270	105995952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105991393_105993601_105993798_105994395_105994499_105994641
ES.33693.1	chr8	-	1682	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	13	-6	7	6	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCCTTTAATCCTATT	518	False	NA	NA	False	NA	NA	NA	105991228	105984911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ES.33693.2	chr8	-	1186	3	NIC	ENSMUSG00000031887.14	novel	386	4	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGGTGCACGCCTTTA	535	False	NA	NA	False	AAAACA	-41	NA	105991211	105984919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_105985928_105987153_105987313_105991192
ES.33693.3	chr8	-	1415	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	-7	281	-7	-281	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGATGCTGAGGTCTAG	498	False	NA	-4	True	AATAAA	-22	NA	105991248	105985198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ES.33693.4	chr8	-	3119	6	NNC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	-4208	-287	intron_retention	FALSE	non_canonical	0	0	junction_4	34.5079700938783	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCGGAGATGCTGAG	NA	False	NA	-10	True	AATAAA	-16	NA	105995449	105985204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105993644_105993949_105993987
ES.33693.5	chr8	-	1517	5	NNC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	2	-287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.6145390296833	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCGGAGATGCTGAG	535	False	NA	-10	True	AATAAA	-16	NA	105991211	105985204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991047
ES.33694.1	chr8	+	3140	8	NIC	ENSMUSG00000033249.11	novel	1476	13	NA	NA	3	-5	intron_retention	FALSE	canonical	0	0	junction_3	0.832993127835043	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTGTTTCTGGTCTCTC	6686	False	NA	NA	False	CATAAA	-11	NA	105996435	106002470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_105997529_105997619_105998841_105999091_105999217_105999441_105999566_106001277_106001384_106001479_106001546_106001674_106001745_106002135
ES.33694.2	chr8	+	2085	12	NNC	ENSMUSG00000033249.11	novel	1739	13	NA	NA	12	0	intron_retention	TRUE	canonical	0	0	junction_1	0.715818897637437	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTCTCTCTTTTTTA	6695	False	NA	NA	False	CATAAA	-18	NA	105996444	106002477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_105996726_105997178_105997288_105997400_105997529_105997619_105998082_105998216_105998282_105998737_105998841_105999091_105999217_105999337_105999566_106001277_106001384_106001479_106001546_106001674_106001745_106002135
ES.33695.1	chr8	+	1342	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	-43	1877	-43	-1877	multi-exon	FALSE	canonical	2	9	junction_3	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGAGGGTGAGCGTG	NA	False	NA	34	True	NA	NA	NA	106002728	106006694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ES.33695.2	chr8	+	2026	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	278	872	278	-872	multi-exon	FALSE	canonical	2	9	junction_3	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	106003049	106007699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ES.33696.1	chr8	-	3526	8	NIC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	13.7707172311839	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	-2	True	NA	NA	NA	106016157	106007040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015424_106015798_106016035
ES.33696.10	chr8	-	175	1	Intergenic	novelGene_27423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACAACAGCGGCAAC	NA	False	NA	NA	False	NA	NA	NA	106014001	106013826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106013800_106014000
ES.33696.2	chr8	-	3767	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	-455	1	-1	0	multi-exon	FALSE	canonical	3	15	junction_6	9.72396809720988	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	False	NA	-3	True	NA	NA	NA	106016137	106007041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
ES.33696.3	chr8	-	3130	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	361	1	1	0	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	False	NA	-3	True	NA	NA	NA	106016135	106007041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
ES.33696.4	chr8	-	2167	4	NNC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	5359	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.5426385841741	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	1123	False	NA	-3	True	NA	NA	NA	106010323	106007041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106010295
ES.33696.5	chr8	-	3269	8	NNC	ENSMUSG00000014837.16	novel	3552	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.059639731791	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGGCTTCTGTCTA	NA	False	NA	-3	True	NA	NA	NA	106016171	106007041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015694_106015798_106016035
ES.33696.6	chr8	-	3526	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	25	1	1	-1	multi-exon	FALSE	canonical	3	15	junction_6	10.3628063333269	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGGCTTCTGTCT	NA	False	NA	-4	True	NA	NA	NA	106016135	106007042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
ES.33696.8	chr8	-	1888	7	FSM	ENSMUSG00000014837.16	ENSMUST00000014981.8	3492	7	328	1276	-8	-3	multi-exon	FALSE	canonical	3	11	junction_6	11.0302614051829	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGATGGCTTTGGGTGTC	NA	False	NA	NA	False	AATAGA	-38	NA	106016168	106008316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106016035
ES.33696.9	chr8	-	2062	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	-25	1276	3	-3	multi-exon	FALSE	canonical	3	15	junction_6	9.72396809720988	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGATGGCTTTGGGTGTC	NA	False	NA	NA	False	AATAGA	-38	NA	106015707	106008316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
ES.33697.1	chr8	+	2503	1	Genic_Genomic	ENSMUSG00000110611.2	novel	NA	NA	NA	NA	-82	613	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTATTTCCTGAAT	4719	False	NA	NA	False	NA	NA	NA	106016227	106018730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_106016200_106018700
ES.33697.2	chr8	+	1982	3	NIC	ENSMUSG00000110611.2	novel	494	3	NA	NA	-52	613	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTATTTCCTGAAT	4749	False	NA	NA	False	NA	NA	NA	106016257	106018730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106017195_106017535_106017768_106017917
ES.33698.1	chr8	-	3044	10	NIC	ENSMUSG00000043251.7	novel	2161	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	15	junction_4	4.8635708062754	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAATCTATGTGTTGG	NA	False	NA	0	True	AATAAA	-16	NA	106022728	106016554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019812_106019883_106020494_106021596
ES.33698.10	chr8	-	4334	5	NNC	ENSMUSG00000043251.7	novel	2161	13	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_4	7.76208734813001	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACGTCTGAATCTATGTG	NA	False	NA	-4	True	AATAAA	-12	NA	106022713	106016558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106017437_106017554_106020494_106021596_106021817_106022257_106022379_106022537
ES.33698.11	chr8	-	2366	14	NNC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	8.32619023245219	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACACGTCTGAATCTATGT	NA	False	NA	-5	True	AATAAA	-11	NA	106022563	106016559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022379_106022537
ES.33698.12	chr8	-	2278	7	NIC	ENSMUSG00000043251.7	novel	2161	13	NA	NA	-29	-289	intron_retention	FALSE	canonical	3	7	junction_6	7.14142842854285	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATATGAATACACTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	106022762	106018721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106022339_106022537
ES.33698.2	chr8	-	2571	13	NNC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_11	8.86119818835655	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022745	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106022052_106022257_106022339_106022537
ES.33698.3	chr8	-	3213	9	NNC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_8	9.15747645369618	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022748	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017685_106018966_106019382_106019483_106019610_106019693_106020494_106021596_106022379_106022537
ES.33698.4	chr8	-	2450	11	NIC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	4	0	intron_retention	FALSE	canonical	1	4	junction_9	8.73842090998139	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022703	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106020494_106021596_106021817_106022257_106022339_106022537
ES.33698.5	chr8	-	2463	12	NIC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	150	0	intron_retention	FALSE	canonical	3	11	junction_11	6.14158027420165	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022422	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106022068_106022257
ES.33698.6	chr8	-	2528	9	NIC	ENSMUSG00000043251.7	novel	2497	14	NA	NA	-1108	0	intron_retention	FALSE	canonical	3	15	junction_4	5.50993421013355	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106020991	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019382_106019483_106019610_106019693_106019812_106019883
ES.33698.7	chr8	-	2623	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	-126	0	-123	0	multi-exon	FALSE	canonical	3	7	junction_13	7.19467258528611	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022856	106016555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
ES.33698.8	chr8	-	2970	9	NIC	ENSMUSG00000043251.7	novel	2161	13	NA	NA	119	-1	intron_retention	FALSE	canonical	3	15	junction_4	4.9228421668788	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTCTGAATCTATGTGTT	NA	False	NA	-2	True	AATAAA	-14	NA	106022453	106016556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019382_106019483_106019812_106019883_106020494_106021596
ES.33699.1	chr8	+	2035	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	-41	-1	-41	1	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGATCTGGTTCTTTGGG	NA	False	NA	22	True	AATAAA	-18	NA	106024253	106032003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.10	chr8	+	2060	9	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	13	-1	intron_retention	FALSE	canonical	0	0	junction_3	485.25507145727	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024307	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024916_106025023_106025166_106025329_106025637_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064
ES.33699.12	chr8	+	1761	9	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	503.322957950459	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024312	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106030816_106030865_106031064_106031110_106031204
ES.33699.13	chr8	+	6121	4	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	19	-1	intron_retention	FALSE	canonical	3	1046	junction_3	93.9550720054833	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024313	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025672_106026689
ES.33699.14	chr8	+	5419	7	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_3	448.078273172098	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024318	106032002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106030865_106031064
ES.33699.18	chr8	+	1980	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	485.442066574375	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGATCTGGTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	106024329	106032000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031180
ES.33699.19	chr8	+	2067	11	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	511.409855204219	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGATCTGGTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	106024329	106032000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024703_106024815_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.21	chr8	+	4770	8	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_3	417.688439692866	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGATCTGGTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	106024329	106032000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106030865_106031064
ES.33699.22	chr8	+	1953	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	485.646444582685	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024330	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031114_106031211
ES.33699.26	chr8	+	4914	7	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_2	444.862400698863	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024330	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106030865_106031064
ES.33699.29	chr8	+	4870	9	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_3	550.146344166714	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024330	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024703_106025023_106025166_106025329_106025637_106025668_106026689_106026752_106026950_106027249_106027884_106030865_106031064_106031110_106031204
ES.33699.30	chr8	+	4969	7	ISM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	37	1	-17	-1	intron_retention	FALSE	canonical	0	0	junction_3	450.149111097892	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024331	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884
ES.33699.31	chr8	+	1941	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	475.536759753169	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024339	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025017_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.32	chr8	+	3752	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	550.030100186445	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024340	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025668_106026689_106026752_106026950_106027249_106027884_106029908_106030816_106030865_106031064_106031110_106031204
ES.33699.34	chr8	+	2744	7	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	1046	junction_2	91.9033308548837	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024341	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106025023_106025166_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064
ES.33699.36	chr8	+	1890	11	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	460.944476048905	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTCTGATCTGGTTCTT	NA	False	NA	18	True	AATAAA	-14	NA	106024348	106031999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204_106031898_106031943
ES.33699.37	chr8	+	4656	9	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_3	391.161711284476	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGATCTGGTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	106024348	106032000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106030865_106031064_106031110_106031204
ES.33699.4	chr8	+	7059	4	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	1	junction_3	609.457864736266	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024289	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106026752_106026950_106027773_106027821
ES.33699.40	chr8	+	5240	6	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1046	junction_3	98.367880936818	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024359	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106024508_106024912_106025023_106025166_106025672_106026689_106026752_106026950_106027249_106027884
ES.33699.42	chr8	+	1913	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	463.735104249808	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGATCTGGTTCTTT	NA	False	NA	19	True	AATAAA	-15	NA	106024365	106032000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026737_106026942_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.5	chr8	+	2080	9	ISM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	7	1	7	-1	intron_retention	FALSE	canonical	0	0	junction_3	391.220126655058	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024301	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064
ES.33699.6	chr8	+	1975	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	369.398142461925	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024301	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025637_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.7	chr8	+	1983	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	479.763136002201	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024303	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027241_106027876_106028098_106030816_106030865_106031064_106031110_106031204
ES.33699.8	chr8	+	1923	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	369.398142461925	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGATCTGGTTCTTTG	NA	False	NA	20	True	AATAAA	-16	NA	106024303	106032001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106024508_106024912_106025023_106025166_106025292_106025650_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ES.337.1	chr1	-	6725	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-19	1694	intron_retention	TRUE	canonical	0	0	junction_18	69.1437777661932	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGTTATCATGACAGCT	NA	False	NA	NA	False	AATAAA	-20	NA	38168762	38090172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.10	chr1	-	4697	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-9	0	intron_retention	FALSE	canonical	3	9	junction_22	55.7085835486035	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168891	38091866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.100	chr1	-	2656	1	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-1683	22	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAATGAAGCTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	38095014	38092358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092400_38095000
ES.337.101	chr1	-	2466	3	ISM	ENSMUSG00000026082.12	ENSMUST00000194650.6	3576	18	14743	10241	7972	4577	internal_fragment	FALSE	canonical	3	159	junction_2	6	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAGCCTTGGCAACTT	8577	False	NA	NA	False	AATAAA	-19	NA	38112470	38102117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38102417_38106580_38106701_38110423
ES.337.102	chr1	-	2528	14	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	6	4577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	77.1413825349811	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAGCCTTGGCAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	38168737	38102117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38114157_38114235_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147482_38147549_38168542
ES.337.103	chr1	-	4400	13	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-26	4575	intron_retention	FALSE	canonical	3	31	junction_6	59.2557428065462	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGAGCCTTGGCAAC	NA	False	NA	NA	False	AATAAA	-17	NA	38168769	38102119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.104	chr1	-	5378	1	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	3798	-803	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTTGTACTAACAGTAG	4403	False	NA	NA	False	NA	NA	NA	38116644	38111266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38111300_38116600
ES.337.105	chr1	-	3335	6	NNC	ENSMUSG00000026082.12	novel	687	3	NA	NA	60	-805	intron_retention	FALSE	canonical	0	0	junction_3	9.63327566303384	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTTGTACTAACAGT	NA	False	NA	NA	False	NA	NA	NA	38168683	38111268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38114105_38118370_38118480_38120239_38120359_38147482_38147549_38167332_38167397_38168542
ES.337.106	chr1	-	2199	10	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-24	14	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	64.5596671094574	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCGTTGTGTTTATCAC	NA	False	NA	NA	False	NA	NA	NA	38168767	38118144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.107	chr1	-	2988	1	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-690	14	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCGTTGTGTTTATCAC	8628	False	NA	NA	False	NA	NA	NA	38121132	38118144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38118100_38121100
ES.337.108	chr1	-	2105	9	ISM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	-127	26278	12	14	5prime_fragment	FALSE	canonical	3	101	junction_1	32.0173292921193	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCGTTGTGTTTATCAC	NA	False	NA	NA	False	NA	NA	NA	38168870	38118144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.11	chr1	-	5128	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	50	0	intron_retention	FALSE	canonical	3	30	junction_14	57.1871203128697	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168832	38091866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.110	chr1	-	3688	8	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	101	junction_1	33.621543142237	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	AATATA	-33	NA	38168747	38118162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38118480_38122784_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.111	chr1	-	4945	6	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	49	-5456	intron_retention	FALSE	canonical	3	163	junction_5	15.5769059828966	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAAGTCTGTTTATAG	NA	False	NA	NA	False	AATAAA	-38	NA	38168833	38123614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.112	chr1	-	3503	6	ISM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	3	33097	3	6268	5prime_fragment	FALSE	canonical	3	163	junction_5	15.5769059828966	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTTTTAGAAAGTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	38168740	38124963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.113	chr1	-	3465	6	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-117	6264	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	75.7453628943713	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAAGACTTTTAGAAAG	NA	False	NA	NA	False	AATAAA	-12	NA	38168999	38124967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.114	chr1	-	1950	6	ISM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	-123	34776	16	4589	5prime_fragment	FALSE	canonical	3	163	junction_5	15.5769059828966	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAATCTTAGATTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	38168866	38126642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.115	chr1	-	1899	7	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-15	4582	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	86.7614865914339	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACAGTGGTAATCTTA	NA	False	NA	NA	False	ATTAAA	-27	NA	38168758	38126649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.12	chr1	-	4138	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	49.6560962134204	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-21	NA	38168740	38091867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.13	chr1	-	4176	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-329	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	80.828317699608	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-21	NA	38169211	38091867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095745_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38113395_38113525_38113998_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38169133
ES.337.18	chr1	-	5013	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	18	-1	intron_retention	FALSE	canonical	0	0	junction_10	67.0702027602323	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-21	NA	38168725	38091867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098369_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.19	chr1	-	5450	13	NIC	ENSMUSG00000026082.12	novel	3576	18	NA	NA	4394	-1	intron_retention	FALSE	canonical	3	159	junction_11	20.24982853151	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	4999	False	NA	-1	True	AATAAA	-21	NA	38116048	38091867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395
ES.337.2	chr1	-	4645	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	192	combination_of_known_junctions	FALSE	canonical	2	12	junction_23	56.5329754717544	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTCGAGATGATGTT	NA	False	NA	NA	False	AATAAA	-27	NA	38168870	38091674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.20	chr1	-	4648	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_24	66.1188823046959	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168870	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.22	chr1	-	4923	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	56	-2	intron_retention	FALSE	canonical	3	30	junction_14	42.6752100606313	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168826	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.23	chr1	-	4283	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-29	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	60.9420704473783	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168772	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.25	chr1	-	4310	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	48.8724304982872	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168823	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.26	chr1	-	4449	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	2	12	junction_23	56.5329754717544	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168868	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.27	chr1	-	4038	20	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	41	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	60.6233090120283	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168841	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38168542
ES.337.28	chr1	-	4112	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-304	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	48.4401522201101	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38169186	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38169133
ES.337.29	chr1	-	4388	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-282	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_22	47.2909055957498	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38169164	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.3	chr1	-	4482	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	-30	-190	-30	190	multi-exon	FALSE	canonical	3	101	junction_15	29.8629099122934	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGTTCGAGATGATG	NA	False	NA	NA	False	AATAAA	-25	NA	38168773	38091676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.32	chr1	-	3991	20	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	50	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	59.195530264743	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168832	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.33	chr1	-	4161	22	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	69.2056975358862	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGGTTTTTTTTTTCTTG	NA	False	NA	-2	True	AATAAA	-20	NA	38168767	38091868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096750_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38167332_38167397_38168542
ES.337.36	chr1	-	2412	15	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	2041	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	80.2933715209673	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTTTTTTTTTTCTT	2646	False	NA	-3	True	AATAAA	-19	NA	38118401	38091869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38114157_38114235_38118370
ES.337.37	chr1	-	4060	21	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	50.716959688057	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTTTTTTTTTTCTT	NA	False	NA	-3	True	AATAAA	-19	NA	38168735	38091869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38168542
ES.337.38	chr1	-	4801	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_17	56.9684739552798	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTTTTTTTTTTCTT	NA	False	NA	-3	True	AATAAA	-19	NA	38168735	38091869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.39	chr1	-	5359	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	307	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_23	59.3865298227269	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGTTTTTTTTTTCTT	NA	False	NA	-3	True	AATAAA	-19	NA	38168436	38091869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332
ES.337.4	chr1	-	9299	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-1	190	intron_retention	FALSE	canonical	3	101	junction_14	27.7319531315376	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGTTCGAGATGATG	NA	False	NA	NA	False	AATAAA	-25	NA	38168744	38091676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.40	chr1	-	4234	25	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	64.1766226042543	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168859	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542_38168632_38168835
ES.337.41	chr1	-	4010	21	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	79.9731204843227	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168729	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38113395_38113525_38114157_38114235_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38168542
ES.337.42	chr1	-	5849	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	273	-4	intron_retention	TRUE	canonical	3	3	junction_23	67.8621420333978	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168470	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38160213_38160291_38167332
ES.337.43	chr1	-	4155	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-26	-4	combination_of_known_splicesites	FALSE	canonical	2	24	junction_13	44.0561381723092	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168769	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.44	chr1	-	5113	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-14	-4	intron_retention	FALSE	canonical	2	12	junction_24	71.0026285702782	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168757	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.46	chr1	-	4654	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_17	66.4362149821694	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168882	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.47	chr1	-	3575	18	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-478	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	73.2633303292599	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	2069	False	NA	-4	True	AATAAA	-18	NA	38127691	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38120239_38120440_38122784_38122902_38124621_38124734_38127051
ES.337.48	chr1	-	4291	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	71.023545711043	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168732	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38160213_38160291_38168542
ES.337.49	chr1	-	4268	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	48.4764576072629	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGGTTTTTTTTTTCT	NA	False	NA	-4	True	AATAAA	-18	NA	38168709	38091870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131099_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.51	chr1	-	4272	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.4248856304532	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGGTTTTTTTTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	38168727	38091871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.52	chr1	-	9307	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-163	5	intron_retention	FALSE	canonical	1	1	junction_18	69.8597916964241	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGGTTTTTTTTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	38169045	38091871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131145_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.53	chr1	-	4326	25	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	76.8510351083329	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACAGGTTTTTTTTTTC	NA	False	NA	-5	True	AATAAA	-17	NA	38168870	38091871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38126921_38126957_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.56	chr1	-	4278	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	60.6859549151774	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACAGGTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	38168740	38091873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131145_38131297_38137933_38138103_38146648_38146776_38147484_38147577_38168542
ES.337.57	chr1	-	4254	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	65.9244052751661	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACAGGTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	38168733	38091873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38168542
ES.337.58	chr1	-	4367	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	54.794374167917	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTACAGGTTTTTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	38168731	38091874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113979_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.6	chr1	-	4837	22	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	189	intron_retention	FALSE	canonical	0	0	junction_16	72.5461460772217	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCAAGTTCGAGATGAT	NA	False	NA	NA	False	AATAAA	-24	NA	38168733	38091677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131099_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.60	chr1	-	5147	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	16	2	intron_retention	FALSE	canonical	2	12	junction_15	53.8166461697371	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTACAGGTTTTTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	38168727	38091874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38147549_38168542
ES.337.61	chr1	-	4702	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	64.9444073163091	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTACAGGTTTTTTTT	NA	False	NA	-8	True	AATAAA	-14	NA	38168869	38091874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113979_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.62	chr1	-	4602	25	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	63	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	72.9688741671558	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38168819	38091875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113998_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.65	chr1	-	4526	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_23	65.4723091382066	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38168875	38091875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38160213_38160291_38167332_38167397_38168542
ES.337.67	chr1	-	6755	13	NIC	ENSMUSG00000026082.12	novel	3576	18	NA	NA	2914	1	intron_retention	FALSE	canonical	3	159	junction_11	20.24982853151	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	3519	False	NA	-9	True	AATAAA	-13	NA	38117528	38091875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395
ES.337.68	chr1	-	4437	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.1895012828348	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38168832	38091875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113979_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.69	chr1	-	4272	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-274	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	61.007483503897	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTACAGGTTTTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	38169156	38091875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38169133
ES.337.71	chr1	-	4128	22	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	70.1565143656418	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168733	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38114157_38114235_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38168542
ES.337.73	chr1	-	4542	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	52.7071303326381	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168833	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.74	chr1	-	7324	14	NIC	ENSMUSG00000026082.12	novel	3576	18	NA	NA	619	0	intron_retention	FALSE	canonical	2	24	junction_10	70.3327677889337	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	3166	False	NA	-10	True	AATAAA	-12	NA	38126594	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38094606_38095344_38095548_38095797_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118477_38120239_38120440_38122784_38122902_38124625
ES.337.78	chr1	-	4695	25	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	67.7425682680806	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168912	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38160213_38160291_38168542
ES.337.79	chr1	-	4993	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_18	67.0064748726436	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168733	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127077_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.83	chr1	-	4327	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	66.9018184041744	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168832	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38110423_38110579_38113395_38113525_38113998_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.84	chr1	-	4924	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-38	0	intron_retention	FALSE	non_canonical	0	0	junction_18	70.2008335049762	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168781	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131133_38131297_38137933_38138103_38146648_38146776_38147484_38147559_38168542
ES.337.85	chr1	-	5164	25	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	46	0	intron_retention	FALSE	canonical	0	0	junction_14	68.4413779976866	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168697	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38116088_38116270_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.87	chr1	-	4460	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-273	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_23	46.35993805359	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38169155	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542_38168632_38168835
ES.337.88	chr1	-	4059	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-289	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.0252623478843	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38169171	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38169133
ES.337.89	chr1	-	4295	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	57.9210400537436	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168709	38091876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38114157_38114235_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.9	chr1	-	4896	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-8	0	intron_retention	FALSE	canonical	2	9	junction_23	68.3151265953532	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168890	38091866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.90	chr1	-	5096	21	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	101	junction_13	30.2461154530627	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168746	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092800_38092920_38093078_38093164_38093377_38093825_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.91	chr1	-	3456	13	ISM	ENSMUSG00000026082.12	ENSMUST00000194650.6	3576	18	15549	1	8778	-1	3prime_fragment	FALSE	canonical	3	159	junction_12	20.3270140453535	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	9383	False	NA	-11	True	AATAAA	-11	NA	38111664	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423
ES.337.92	chr1	-	10098	21	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_15	66.2622818804182	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168732	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092800_38092920_38093078_38093164_38093377_38093825_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127081_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ES.337.94	chr1	-	4276	23	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	49	-1	combination_of_known_splicesites	FALSE	canonical	2	12	junction_22	64.181190442462	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168833	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38167332_38167397_38168542
ES.337.95	chr1	-	4516	25	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	74.6248836775568	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168732	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38114157_38114235_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147482_38147549_38168542
ES.337.96	chr1	-	3203	20	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	51.5689034259409	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168721	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38146648_38146776_38147484_38147549_38168542
ES.337.97	chr1	-	4116	22	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	71.9606216326654	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168737	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106695_38110419_38110579_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168537
ES.337.98	chr1	-	4175	24	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	64.5886211425543	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168854	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38113998_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168835
ES.337.99	chr1	-	4346	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	53.5928945580236	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTACAGGTTTTT	NA	False	NA	-11	True	AATAAA	-11	NA	38168832	38091877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147558_38168542
ES.3370.1	chr10	-	177	1	Intergenic	novelGene_2599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTACGAAAA	9858	False	NA	NA	False	NA	NA	NA	80896574	80896397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80896400_80896600
ES.33700.1	chr8	-	157	1	Intergenic	novelGene_27424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	106028537	106028380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106028400_106028500
ES.33701.1	chr8	-	1229	1	Intergenic	novelGene_27425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	106030410	106029181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106029200_106030400
ES.33702.1	chr8	+	2452	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-47	784	-39	-1	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATGTGTTAAATCAGCT	NA	False	NA	5	True	AATAAA	-16	NA	106032193	106036608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ES.33702.2	chr8	+	4083	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	-6	-888	2	888	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACATGTGTTTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	106032234	106038280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ES.33702.3	chr8	+	4026	19	FSM	ENSMUSG00000014791.11	ENSMUST00000212033.2	2351	19	-6	-1669	-2	886	multi-exon	FALSE	canonical	1	1	junction_3	8.33425920782464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGACATGTGTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	106032238	106038278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ES.33702.4	chr8	+	2367	19	FSM	ENSMUSG00000014791.11	ENSMUST00000212033.2	2351	19	-6	-10	-2	10	multi-exon	FALSE	canonical	1	1	junction_3	8.33425920782464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAGCTCTGAACCTGTG	NA	False	NA	16	True	AATAAA	-27	NA	106032238	106036619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ES.33702.5	chr8	+	3328	18	NIC	ENSMUSG00000014791.11	novel	3189	20	NA	NA	296	464	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	8.05216556227047	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106032570	106037856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ES.33702.6	chr8	+	2557	1	Genic_Genomic	ENSMUSG00000014791.11	novel	NA	NA	NA	NA	2348	489	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	106035324	106037881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_106035300_106037900
ES.33702.7	chr8	+	1209	3	ISM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	3775	-2	3039	2	3prime_fragment	FALSE	canonical	3	33	junction_2	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTC	NA	False	NA	NA	False	AGTAAA	-15	NA	106036015	106037394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106036040_106036124_106036212_106036296
ES.33703.1	chr8	+	5225	1	Intergenic	novelGene_27426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTGTTTGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	106043487	106048712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106043500_106048700
ES.33704.1	chr8	-	3835	3	FSM	ENSMUSG00000041679.10	ENSMUST00000210801.2	3830	3	-3	-2	-1	0	multi-exon	FALSE	canonical	2	2	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTTCTCTGATGTTCT	6328	False	NA	NA	False	ATTAAA	-14	NA	106052909	106038972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106042655_106049896_106049999_106052858
ES.33704.2	chr8	-	2530	5	NIC	ENSMUSG00000041679.10	novel	2416	6	NA	NA	7	0	intron_retention	FALSE	canonical	1	2	junction_1	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTTCTCTGATGTTCT	6338	False	NA	NA	False	ATTAAA	-14	NA	106052899	106038972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106040197_106040312_106040529_106041707_106042655_106049896_106049999_106052858
ES.33704.3	chr8	-	3972	3	NNC	ENSMUSG00000041679.10	novel	3830	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGACTTTCTCTGATGTT	6345	False	NA	NA	False	ATTAAA	-12	NA	106052892	106038974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106042655_106049896_106049999_106052702
ES.33704.4	chr8	-	1576	2	ISM	ENSMUSG00000041679.10	ENSMUST00000211199.2	2416	6	-8	9484	7	-9484	5prime_fragment	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTAATGTTTTGT	6338	False	NA	NA	False	AATAAA	-16	NA	106052899	106048463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106049999_106052858
ES.33705.1	chr8	+	819	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	-18	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	241	False	NA	16	True	AATAAA	-18	NA	106052975	106055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
ES.33705.2	chr8	+	936	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	-38	-3	-4	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	247	False	NA	16	True	AATAAA	-18	NA	106052981	106055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
ES.33705.3	chr8	+	885	5	ISM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	-10	5	-2	-2	intron_retention	FALSE	canonical	3	25	junction_4	167.087364872392	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTAACGGCCGTGTGGGT	249	False	NA	11	True	AATAAA	-13	NA	106052983	106055682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239
ES.33705.4	chr8	+	1005	4	ISM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	-2	0	-2	0	intron_retention	FALSE	canonical	3	392	junction_2	12.9614813968157	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	257	False	NA	16	True	AATAAA	-18	NA	106052991	106055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953
ES.33705.5	chr8	+	776	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	7	2	-1	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	258	False	NA	16	True	AATAAA	-18	NA	106052992	106055687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ES.33705.6	chr8	+	685	5	ISM	ENSMUSG00000014856.13	ENSMUST00000109372.3	603	6	-91	5749	2	0	5prime_fragment	FALSE	canonical	2	3	junction_4	176.59328271483	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACGGCCGTGTGGGTGA	261	False	NA	13	True	AATAAA	-15	NA	106052995	106055684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055403
ES.33705.7	chr8	+	777	6	NNC	ENSMUSG00000014856.13	novel	785	6	NA	NA	-11	-1	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_4	158.439893966135	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCCGTGTGGGTGATG	274	False	NA	15	True	AATAAA	-17	NA	106053008	106055686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055221_106055325_106055403
ES.33705.8	chr8	+	663	5	NNC	ENSMUSG00000014856.13	novel	785	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.864278681808	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACGGCCGTGTGGGTGAT	8	True	NA	14	True	AATAAA	-16	NA	106053026	106055685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106053107_106053682_106053779_106054970_106055091_106055239_106055325_106055403
ES.33706.1	chr8	+	3666	16	NNC	ENSMUSG00000014786.9	novel	3972	11	NA	NA	-1146	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.24961536185438	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	106074328	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106074624_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.10	chr8	+	3133	12	NIC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	1	-534	intron_retention	FALSE	canonical	0	0	junction_10	3.02605763219877	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTCCTCTGTCCATTT	683	False	NA	NA	False	ATTAAA	-16	NA	106082094	106095979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106082182_106082478_106082657_106083162_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.11	chr8	+	2824	13	NNC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	3	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.27766007321619	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	685	False	NA	NA	False	ATTAAA	-14	NA	106082096	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106082182_106082564_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.12	chr8	+	3092	11	NNC	ENSMUSG00000014786.9	novel	3972	11	NA	NA	338	-539	intron_retention	TRUE	canonical	0	0	junction_8	3.28024389337134	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGAGCGTCCTCTGTC	1020	False	NA	NA	False	ATTAAA	-11	NA	106082431	106095974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106082657_106083162_106083806_106084025_106084116_106085005_106085136_106085723_106085813_106085958_106086086_106088192_106088271_106089894_106090066_106090571_106090639_106091313_106091449_106094637
ES.33706.13	chr8	+	2767	10	NNC	ENSMUSG00000014786.9	novel	3972	11	NA	NA	1247	-536	intron_retention	FALSE	canonical	0	0	junction_5	2.10818510677892	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	1929	False	NA	NA	False	ATTAAA	-14	NA	106083340	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106083806_106084025_106084116_106085005_106085136_106085723_106085813_106085958_106086086_106088120_106088271_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.14	chr8	+	2007	2	ISM	ENSMUSG00000014786.9	ENSMUST00000212772.2	3972	11	8688	536	8688	-536	3prime_fragment	FALSE	canonical	2	7	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	9370	False	NA	NA	False	ATTAAA	-14	NA	106090781	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106091449_106094637
ES.33706.15	chr8	+	130	1	Intergenic	novelGene_27427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106092251	106092381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106092300_106092400
ES.33706.2	chr8	+	4232	16	NNC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	-22	-538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	2.72437556556034	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGCGTCCTCTGTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	106075452	106095975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083491_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.3	chr8	+	4615	15	NNC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	9	-535	intron_retention	FALSE	non_canonical	0	0	junction_1	3.06727293622627	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCGTCCTCTGTCCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	106075483	106095978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106076205_106080198_106080358_106081775_106081940_106082102_106082657_106083162_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106088120_106088271_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.5	chr8	+	4085	16	FSM	ENSMUSG00000014786.9	ENSMUST00000073149.7	3499	16	16	-602	16	-536	multi-exon	FALSE	canonical	0	0	junction_14	2.98589275687449	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	106075490	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.6	chr8	+	4215	15	NIC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	107	-534	intron_retention	FALSE	canonical	0	0	junction_13	2.78204887059292	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTCCTCTGTCCATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	106075581	106095979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.7	chr8	+	3356	15	NIC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	440	-538	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.34724986110285	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGCGTCCTCTGTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	106075914	106095975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106076205_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33706.8	chr8	+	3443	15	NNC	ENSMUSG00000014786.9	novel	3499	16	NA	NA	466	-536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.02793119917524	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCGTCCTCTGTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	106075940	106095977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106076205_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083491_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ES.33707.2	chr8	-	3900	22	FSM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	27	1	-17	-1	multi-exon	FALSE	canonical	0	0	junction_10	2.64789309989673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGAGCCTTTCTCTTCTT	NA	False	NA	-2	True	AATAAA	-18	NA	106074558	106055795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318_106061435_106063013_106063194_106063270_106063429_106063518_106063663_106063754_106063850_106063949_106064062_106064306_106064402_106064483_106064590_106064661_106064730_106065033_106065099_106065485_106065593_106074284
ES.33707.3	chr8	-	3296	18	NIC	ENSMUSG00000014778.11	novel	3928	22	NA	NA	145	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	2.86005783085723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGAGCCTTTCTCTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	106064394	106055796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318_106061435_106062868_106062893_106063013_106063194_106063270_106063429_106063518_106063663_106063754_106063850_106063949_106064062_106064306
ES.33707.4	chr8	-	3047	10	NIC	ENSMUSG00000014778.11	novel	3928	22	NA	NA	2634	-6	intron_retention	FALSE	canonical	0	0	junction_9	2.70801280154532	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATAAGAGCCTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	106061905	106055800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106056112_106056200_106056402_106056478_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318
ES.33708.1	chr8	+	5169	20	NIC	ENSMUSG00000014782.17	novel	3654	23	NA	NA	-307	1	intron_retention	FALSE	canonical	1	1	junction_1	4.34393900672913	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCATATGCATTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	106101228	106109492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106101614_106102095_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ES.33708.2	chr8	+	4373	21	NNC	ENSMUSG00000014782.17	novel	3654	23	NA	NA	-44	1	intron_retention	FALSE	canonical	0	0	junction_11	4.05555175037873	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGACTGGGCATATGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	106101491	106109488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106101614_106102095_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104937_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572
ES.33708.3	chr8	+	4108	20	NNC	ENSMUSG00000014782.17	novel	3654	23	NA	NA	-44	1	intron_retention	FALSE	canonical	0	0	junction_1	4.68273187779689	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCATATGCATTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	106101491	106109492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106101612_106102095_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104516_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ES.33708.4	chr8	+	4394	22	NNC	ENSMUSG00000014782.17	novel	4167	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.22174481129552	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCATATGCATTCTGGG	NA	False	NA	NA	False	AATAAA	-24	NA	106101540	106109494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106101614_106101858_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ES.33708.5	chr8	+	2952	13	ISM	ENSMUSG00000014782.17	ENSMUST00000014927.8	4167	21	2137	7	2137	0	3prime_fragment	FALSE	canonical	2	5	junction_5	3.37782803325187	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGACTGGGCATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	106104149	106109487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ES.33708.6	chr8	+	2613	10	NIC	ENSMUSG00000014782.17	novel	4167	21	NA	NA	2291	-1	intron_retention	FALSE	canonical	0	0	junction_1	5.3633415049543	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTTGACTGGGCATATGC	NA	False	NA	NA	False	AATAAA	-16	NA	106104303	106109486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106104516_106105312_106105819_106105886_106106134_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ES.33708.7	chr8	+	3060	11	ISM	ENSMUSG00000014782.17	ENSMUST00000014927.8	4167	21	2297	7	2297	0	intron_retention	FALSE	canonical	2	5	junction_4	3.05941170815567	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTGACTGGGCATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	106104309	106109487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572
ES.33708.8	chr8	+	1035	2	NIC	ENSMUSG00000014782.17	novel	1613	5	NA	NA	1153	1	intron_retention	FALSE	canonical	3	15	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCATATGCATTCTG	821	False	NA	NA	False	AATAAA	-22	NA	106108278	106109492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106108689_106108867
ES.33709.1	chr8	+	295	1	Intergenic	novelGene_27429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAGCCTTGATCAG	6204	False	NA	NA	False	NA	NA	NA	106124037	106124332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106124000_106124300
ES.3371.1	chr10	-	1974	10	ISM	ENSMUSG00000035041.9	ENSMUST00000117422.2	2294	12	6233	9	-66	-9	3prime_fragment	FALSE	canonical	0	0	junction_1	2.16595429884644	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGGCTGCGGCTCA	NA	False	NA	NA	False	NA	NA	NA	80928475	80920166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336
ES.3371.2	chr10	-	1900	10	NNC	ENSMUSG00000035041.9	novel	2294	12	NA	NA	-49	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.3094010767585	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGGCTGCGGCTCA	NA	False	NA	NA	False	NA	NA	NA	80928458	80920166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925197_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336
ES.3371.3	chr10	-	2021	11	NIC	ENSMUSG00000035041.9	novel	2294	12	NA	NA	-11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.28254244210267	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGGCTGCGGCTCA	7303	False	NA	NA	False	NA	NA	NA	80934599	80920166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928640_80928717_80934489
ES.33710.1	chr8	+	156	1	Intergenic	novelGene_27430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAATAAATAAATAAA	1134	False	NA	NA	False	NA	NA	NA	106138200	106138356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106138200_106138400
ES.33711.1	chr8	-	3070	17	FSM	ENSMUSG00000051648.14	ENSMUST00000063071.13	3048	17	-16	-6	-16	6	multi-exon	FALSE	canonical	0	0	junction_11	1.11628569371823	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGATTTCTTCTCTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	106140150	106109432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106109702_106111362_106111465_106111654_106111810_106111961_106112154_106113381_106114010_106114397_106114513_106114822_106114907_106115096_106115240_106115675_106115780_106116911_106117073_106118504_106118716_106120194_106120264_106120457_106120590_106121902_106122095_106122961_106123113_106134959_106135257_106140085
ES.33711.2	chr8	-	3002	16	FSM	ENSMUSG00000051648.14	ENSMUST00000167294.8	2979	16	-17	-6	-17	6	multi-exon	FALSE	canonical	0	0	junction_12	1.01105005920687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTAGATTTCTTCTCTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	106140151	106109432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106109702_106111362_106111465_106111654_106111810_106111961_106112154_106113381_106114010_106114397_106114513_106114822_106114907_106115096_106115240_106115675_106115780_106116911_106117073_106118504_106118716_106120457_106120590_106121902_106122095_106122961_106123113_106134959_106135257_106140085
ES.33711.4	chr8	-	172	1	Intergenic	novelGene_27428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAATTTTAATCACT	NA	False	NA	NA	False	NA	NA	NA	106117406	106117234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106117200_106117400
ES.33711.5	chr8	-	3488	2	ISM	ENSMUSG00000051648.14	ENSMUST00000168888.2	624	4	-62	11376	-16	-11376	5prime_fragment	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAGGTACACT	NA	False	NA	NA	False	NA	NA	NA	106140150	106131833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106135257_106140085
ES.33712.1	chr8	+	2406	5	ISM	ENSMUSG00000054320.17	ENSMUST00000139900.9	649	6	27	10336	-24	-10336	5prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGTCTCTCATTTATT	1815	False	NA	NA	False	AGTAAA	-17	NA	106140229	106160118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106140256_106151888_106152017_106153389_106153583_106154358_106154456_106158156
ES.33713.1	chr8	+	127	1	Antisense	novelGene_ENSMUSG00000014846.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCGAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	106195364	106195491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_106195400_106195500
ES.33714.1	chr8	-	988	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	136	3	136	-3	multi-exon	FALSE	canonical	2	4	junction_3	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGACTGACTCAGTCT	NA	False	NA	-3	True	AATAAA	-16	NA	106198022	106194127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
ES.33715.1	chr8	-	1628	11	NNC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-190	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.52278299076171	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGACTTAATGCTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	106223724	106199049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106199514_106199622_106199702_106200115_106200199_106202670_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205496_106212093_106212141_106214422_106214499_106223441
ES.33715.2	chr8	-	1951	12	NNC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-712	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.67629859985879	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCGGACTTAATGCTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	106211694	106199050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203648_106203751_106205383_106205493_106208814_106208991_106210172_106210419_106210820_106211060_106211606
ES.33715.3	chr8	-	1014	6	NIC	ENSMUSG00000039199.7	novel	1737	11	NA	NA	3257	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	4.45421149026402	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTGCGGACTTAAT	7097	False	NA	NA	False	AATAAA	-16	NA	106203836	106199056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203648
ES.33715.4	chr8	-	2134	13	NIC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-173	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	4.02336923485777	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTGCGGACTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	106223707	106199056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
ES.33715.5	chr8	-	6483	9	NIC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-182	-1	intron_retention	FALSE	canonical	1	2	junction_5	2.95803989154981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTTTGCGGACTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	106223716	106199057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106199514_106199622_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106212141_106214422_106214499_106223441
ES.33715.6	chr8	-	2279	14	FSM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	-226	3	-194	-1	multi-exon	FALSE	canonical	0	0	junction_10	3.75428748981921	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTTTGCGGACTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	106223728	106199057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
ES.33715.7	chr8	-	2112	12	NIC	ENSMUSG00000039199.7	novel	2056	14	NA	NA	-189	-1	intron_retention	FALSE	canonical	1	1	junction_2	3.6454432101388	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTTTGCGGACTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	106223723	106199057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106199514_106199622_106199873_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106212093_106212141_106214422_106214499_106223441
ES.33716.1	chr8	+	1771	6	NNC	ENSMUSG00000031891.7	novel	1840	5	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGAATGGGAGAGATAG	2072	False	NA	NA	False	AATAAA	-16	NA	106245377	106250612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106245615_106245684_106245762_106248774_106248988_106249104_106249291_106249396_106249535_106249692
ES.33717.1	chr8	+	171	1	Intergenic	novelGene_27431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTCCAAGAACAA	1158	False	NA	NA	False	NA	NA	NA	106283411	106283582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106283400_106283600
ES.33718.1	chr8	+	174	1	Intergenic	novelGene_27432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGGAAA	9156	False	NA	NA	False	NA	NA	NA	106291409	106291583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106291400_106291600
ES.33719.1	chr8	-	1466	8	NNC	ENSMUSG00000013160.8	novel	499	2	NA	NA	28	12340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.60403994549	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	106292651	106238756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106239222_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ES.33719.2	chr8	-	1739	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	-106	-4	-106	4	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTGTCTGCTCCCTCC	NA	False	NA	-6	True	AATAAA	-22	NA	106292785	106251092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ES.33719.3	chr8	-	2774	1	Genic_Genomic	ENSMUSG00000013160.8	novel	NA	NA	NA	NA	12241	3	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTCTGTCTGCTCCCTC	NA	False	NA	-7	True	AATAAA	-21	NA	106253867	106251093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_106251100_106253900
ES.33719.4	chr8	-	1408	7	NNC	ENSMUSG00000013160.8	novel	1629	8	NA	NA	40	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	275.321428314051	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCTGCTGTCTGTCT	NA	False	NA	-15	True	AATAAA	-13	NA	106292639	106251101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106251697_106251788_106251867_106251954_106252132_106252259_106252334_106255805_106255886_106257446_106257626_106292414
ES.33719.5	chr8	-	5249	7	NNC	ENSMUSG00000013160.8	novel	1629	8	NA	NA	43	-5	intron_retention	FALSE	canonical	0	0	junction_5	272.680164702573	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCTGCTGTCTGTCT	NA	False	NA	-15	True	AATAAA	-13	NA	106292636	106251101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106251697_106251788_106251867_106251954_106255886_106257446_106257626_106265952_106266125_106268986_106269059_106292414
ES.33719.7	chr8	-	3142	7	NIC	ENSMUSG00000013160.8	novel	1629	8	NA	NA	43	-5	intron_retention	FALSE	canonical	3	556	junction_1	39.1308346732116	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCTGCTGTCTGTCT	NA	False	NA	-15	True	AATAAA	-13	NA	106292636	106251101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106257626_106265952_106266125_106292414
ES.33719.9	chr8	-	1628	8	NNC	ENSMUSG00000013160.8	novel	1629	8	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	211.564820963665	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAACCCTGCTGTCTGTC	NA	False	NA	-16	True	AATAAA	-12	NA	106292696	106251102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252322_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ES.3372.1	chr10	-	1913	1	Intergenic	novelGene_2600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTGCATCAAAACAACAG	8403	False	NA	NA	False	NA	NA	NA	80949435	80947522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_80947500_80949400
ES.33720.1	chr8	+	1472	4	NNC	ENSMUSG00000104168.2	novel	766	2	NA	NA	-144	4154	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1.69967317119759	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTGTCTATATTTT	NA	False	NA	NA	False	NA	NA	NA	106292811	106308895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106292907_106293000_106293103_106304178_106304486_106307927
ES.33720.2	chr8	+	4991	3	NNC	ENSMUSG00000104168.2	novel	766	2	NA	NA	-133	4159	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTATATTTTATCCC	NA	False	NA	NA	False	NA	NA	NA	106292822	106308900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106292907_106293000_106293103_106304095
ES.33720.3	chr8	+	166	1	NIC	ENSMUSG00000104168.2	novel	462	3	NA	NA	2028	-151	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGGTGAGGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	106295010	106295176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106295000_106295200
ES.33720.4	chr8	+	183	1	Intergenic	novelGene_27434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTTATTCTCC	NA	False	NA	NA	False	NA	NA	NA	106303398	106303581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106303400_106303600
ES.33721.1	chr8	-	1125	3	NIC	ENSMUSG00000005705.11	novel	674	5	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	2	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAAAGCTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	106306492	106293331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106294125_106294237_106294359_106306281
ES.33721.2	chr8	-	479	2	ISM	ENSMUSG00000005705.11	ENSMUST00000005849.11	661	5	939	2	939	-2	3prime_fragment	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAAAGCTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	106293991	106293331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106293571_106293751
ES.33721.3	chr8	-	179	1	Intergenic	novelGene_27433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	106303358	106303179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106303200_106303400
ES.33722.1	chr8	-	101	1	FSM	ENSMUSG00000110686.2	ENSMUST00000212546.2	880	1	852	-73	852	73	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGCGTCCTCCTCCAAG	NA	False	NA	NA	False	NA	NA	NA	106311980	106311879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106311900_106312000
ES.33723.1	chr8	+	4316	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	-203	-5	-203	5	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACATGGCTTGGTGC	2439	False	NA	12	True	NA	NA	NA	106331683	106348856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.10	chr8	+	3166	14	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	2	-2483	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	28.8962641675397	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGATGTGTGCTCTTAG	2644	False	NA	NA	False	AATAAA	-20	NA	106331888	106346368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106345804
ES.33723.11	chr8	+	4186	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	65	junction_11	10.8908218239029	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2647	False	NA	7	True	NA	NA	NA	106331891	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106348110_106348202_106348294_106348436
ES.33723.13	chr8	+	3513	14	ISM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	14	2488	14	-2488	5prime_fragment	FALSE	canonical	3	65	junction_11	9.81786802439199	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAAGGTGATGTGTGCT	2656	False	NA	NA	False	AATAAA	-15	NA	106331900	106346363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445
ES.33723.14	chr8	+	4074	21	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.1515541311665	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGTTTCCTACAT	2656	False	NA	2	True	NA	NA	NA	106331900	106348846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341030_106341158_106341290_106341426_106341574_106341654_106342148_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.15	chr8	+	3959	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	14	135	14	-135	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTCTGCACAGTCTTTG	2656	False	NA	NA	False	AATGAA	-14	NA	106331900	106348716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.17	chr8	+	4155	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	14	-23	intron_retention	FALSE	canonical	3	65	junction_11	12.1466044637998	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAAAAAAAGC	2656	False	NA	-16	True	NA	NA	NA	106331900	106348828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.2	chr8	+	4074	22	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4623014955882	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2439	False	NA	7	True	NA	NA	NA	106331683	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331746_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.21	chr8	+	4115	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	58	-23	intron_retention	FALSE	canonical	3	65	junction_11	11.9954157910428	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAAAAAAAGC	2700	False	NA	-16	True	NA	NA	NA	106331944	106348828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.22	chr8	+	4760	13	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	9688	-3	intron_retention	FALSE	canonical	3	67	junction_2	11.6821326059167	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTTTCCTACATGG	NA	False	NA	4	True	NA	NA	NA	106341574	106348848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106342498_106342610_106342804_106342889_106343016_106343509_106343864_106343947_106345358_106345445_106345568_106346419_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.23	chr8	+	3295	13	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	11001	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	27.0693553672783	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAAAAAAAAGC	NA	False	NA	-16	True	NA	NA	NA	106342887	106348828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346417_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.24	chr8	+	3172	11	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	11714	0	intron_retention	FALSE	canonical	3	76	junction_2	10.7280007457121	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	NA	False	NA	7	True	NA	NA	NA	106343600	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.25	chr8	+	3820	12	NNC	ENSMUSG00000005698.16	novel	851	3	NA	NA	-13842	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.335451632731	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106349357	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106349542_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.26	chr8	+	3769	12	NNC	ENSMUSG00000005698.16	novel	851	3	NA	NA	-851	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.335451632731	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAAGACTCCGTCT	NA	False	NA	35	True	AATAAA	-18	NA	106362348	106409551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106362484_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.27	chr8	+	4078	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-291	-5	-280	5	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCCGTCTTTTGGGAC	NA	False	NA	43	True	AATAAA	-26	NA	106362919	106409559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.29	chr8	+	3946	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-158	1	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	123.55405013914	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGACTCCGTCTTTTG	NA	False	NA	39	True	AATAAA	-22	NA	106363041	106409555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ES.33723.3	chr8	+	3235	14	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.8121784289681	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2618	False	NA	7	True	NA	NA	NA	106331862	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341645_106344088_106345358_106345448_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.30	chr8	+	3467	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-161	476	-150	-476	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTTTGCTCTGTTTG	NA	False	NA	15	True	AATAAA	-25	NA	106363049	106409078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.32	chr8	+	3906	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-85	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.777406560265	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCATTCTGAAGACTC	NA	False	NA	30	True	AATAAA	-13	NA	106363114	106409546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391695_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.33	chr8	+	2525	11	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-85	159	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	134.601968782035	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTGGCATTCTTATTC	NA	False	NA	NA	False	NA	NA	NA	106363114	106406358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406034
ES.33723.35	chr8	+	4541	11	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-54	-478	intron_retention	FALSE	canonical	3	229	junction_10	70.5039006013143	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTCTTTGCTCTGTT	NA	False	NA	13	True	AATAAA	-23	NA	106363145	106409076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705
ES.33723.39	chr8	+	4008	13	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	162.620959254608	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363152	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106380010_106380180_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.4	chr8	+	4001	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	20.6815739246316	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2622	False	NA	7	True	NA	NA	NA	106331866	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106331983_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.42	chr8	+	5015	11	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-58	0	-47	0	intron_retention	FALSE	canonical	3	206	junction_10	76.5820475046208	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363152	106409554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702
ES.33723.43	chr8	+	3745	11	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.789960122174	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAAGACTCCGTCT	NA	False	NA	35	True	AATAAA	-18	NA	106363152	106409551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106397922_106398073_106401471_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.44	chr8	+	3358	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-47	-476	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	123.55405013914	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTTTGCTCTGTTTG	NA	False	NA	15	True	AATAAA	-25	NA	106363152	106409078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ES.33723.46	chr8	+	4889	10	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-46	-1	intron_retention	FALSE	canonical	0	0	junction_5	145.469694777866	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363153	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705
ES.33723.49	chr8	+	3934	13	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-46	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	164.718003974469	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCCGTCTTTTGGGACT	NA	False	NA	44	True	AATAAA	-27	NA	106363153	106409560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106381371_106381464_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.5	chr8	+	2840	17	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.7459700528321	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2630	False	NA	7	True	NA	NA	NA	106331874	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342364_106344580_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.50	chr8	+	4003	13	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	194.955550489507	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363155	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106380010_106380180_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398077_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ES.33723.54	chr8	+	3601	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-32	-215	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	120.768818152769	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTTTTTCTCCTGTGTA	NA	False	NA	NA	False	TTTAAA	-26	NA	106363167	106409339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
ES.33723.55	chr8	+	3800	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	136.508468541227	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363173	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398064_106401506_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.56	chr8	+	4070	14	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-25	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.436857845644	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGGCATTCTGAAGACT	NA	False	NA	29	True	AATAAA	-12	NA	106363174	106409545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106380010_106380180_106381371_106381464_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.59	chr8	+	5153	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-22	-6	intron_retention	FALSE	canonical	3	11	junction_2	168.459770315871	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCATTCTGAAGACTCCG	NA	False	NA	32	True	AATAAA	-15	NA	106363177	106409548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106380010_106380180_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702
ES.33723.6	chr8	+	7968	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	-11	-3849	-11	3849	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGCCTGGGCAACAC	2631	False	NA	NA	False	NA	NA	NA	106331875	106352700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33723.62	chr8	+	3682	11	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	141.287649849518	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363188	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.63	chr8	+	4759	11	ISM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	-20	218	-9	-218	intron_retention	FALSE	canonical	3	206	junction_10	76.5820475046208	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTTTTTTTCTCCTGT	NA	False	NA	NA	False	TTTAAA	-23	NA	106363190	106409336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702
ES.33723.64	chr8	+	3909	13	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	166.087556393876	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363190	106409554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106379605_106379716_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.65	chr8	+	3564	12	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-9	-235	combination_of_known_junctions	FALSE	canonical	3	229	junction_10	67.2234463229697	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCTGACTGATTTCAAA	NA	False	NA	NA	False	TTTAAA	-6	NA	106363190	106409319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.72	chr8	+	3936	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	138.822497998031	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCATTCTGAAGACTC	NA	False	NA	30	True	AATAAA	-13	NA	106363197	106409546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106407917
ES.33723.74	chr8	+	3796	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.508468541227	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363216	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401476_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.75	chr8	+	3696	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	135.332220543946	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGAAGACTCCGTCT	NA	False	NA	35	True	AATAAA	-18	NA	106363218	106409551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393350_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.76	chr8	+	7185	11	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	25	0	intron_retention	FALSE	canonical	3	206	junction_9	76.5806764138317	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363235	106409554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ES.33723.79	chr8	+	3760	12	NIC	ENSMUSG00000005698.16	novel	528	3	NA	NA	-103	-10	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	135.086748987701	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAGGCATTCTGAAGAC	NA	False	NA	28	True	AATAAA	-11	NA	106363463	106409544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106363597_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.8	chr8	+	4095	22	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.6797193803686	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2631	False	NA	7	True	NA	NA	NA	106331875	106348851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348049_106348110_106348202_106348294_106348436
ES.33723.80	chr8	+	10300	11	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-86	-1	intron_retention	FALSE	canonical	3	64	junction_10	129.007945491741	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106363480	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
ES.33723.81	chr8	+	4251	12	NNC	ENSMUSG00000005698.16	novel	729	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	135.336189903221	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363582	106409554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106364197_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.82	chr8	+	4381	11	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	5705	-1	combination_of_known_junctions	FALSE	canonical	3	229	junction_9	70.4970921386123	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGACTCCGTCTTT	NA	False	NA	37	True	AATAAA	-20	NA	106369402	106409553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ES.33723.83	chr8	+	10033	6	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-11594	-8	intron_retention	FALSE	canonical	3	229	junction_5	85.5789693791646	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCATTCTGAAGACTC	NA	False	NA	30	True	AATAAA	-13	NA	106391048	106409546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106391176_106391487_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705
ES.33723.84	chr8	+	2317	7	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	-9298	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	167.27763017079	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGAAGACTCCGTCTT	NA	False	NA	36	True	AATAAA	-19	NA	106393344	106409552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106408066
ES.33723.85	chr8	+	179	1	Intergenic	novelGene_27438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	534	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	1763	False	NA	NA	False	NA	NA	NA	106401815	106401994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106401800_106402000
ES.33723.86	chr8	+	4049	2	NNC	ENSMUSG00000005698.16	novel	469	3	NA	NA	2750	-8	intron_retention	TRUE	non_canonical	0	0	junction_1	0	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCATTCTGAAGACTC	5340	False	NA	30	True	AATAAA	-13	NA	106405392	106409546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106406383_106406487
ES.33723.9	chr8	+	4121	21	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.0260641059632	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTTCCTACATGGCT	2631	False	NA	6	True	NA	NA	NA	106331875	106348850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342148_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ES.33724.1	chr8	-	2659	1	Antisense	novelGene_ENSMUSG00000038604.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5888	False	NA	NA	False	NA	NA	NA	106332115	106329456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106329500_106332100
ES.33725.1	chr8	-	161	1	Intergenic	novelGene_27435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAATTTTTTTAA	3604	False	NA	NA	False	NA	NA	NA	106334399	106334238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106334200_106334400
ES.33726.1	chr8	-	2955	1	NIC	ENSMUSG00000098120.2	novel	332	2	NA	NA	21	-10160	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGCTATTATTCCCAA	NA	False	NA	NA	False	NA	NA	NA	106364096	106361141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106361100_106364100
ES.33727.1	chr8	-	212	1	Intergenic	novelGene_27436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATTCTAAG	NA	False	NA	NA	False	NA	NA	NA	106376229	106376017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106376000_106376200
ES.33728.1	chr8	-	2373	1	Intergenic	novelGene_27437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTTACACCGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	106384985	106382612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106382600_106385000
ES.33729.1	chr8	-	5837	2	Genic_Genomic	ENSMUSG00000080021.6	novel	454	1	NA	NA	-5529	167	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACACCTGTCTAGTACT	NA	False	NA	NA	False	AATAAA	-43	NA	106392948	106386798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_106391173_106391485
ES.33729.2	chr8	-	6150	1	FSM	ENSMUSG00000080021.6	ENSMUST00000116136.3	454	1	-5529	-167	-5529	167	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACACCTGTCTAGTACT	NA	False	NA	NA	False	AATAAA	-43	NA	106392948	106386798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106386800_106392900
ES.33729.4	chr8	-	7199	4	Genic_Genomic	ENSMUSG00000080021.6	novel	454	1	NA	NA	-12588	167	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACACCTGTCTAGTACT	NA	False	NA	NA	False	AATAAA	-43	NA	106400007	106386798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_106391662_106393294_106393425_106396862_106396982_106397920
ES.3373.1	chr10	-	2492	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	73	6	73	-6	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACATCTGTGGTTTCT	NA	False	NA	-4	True	AATAAA	-31	NA	81003684	80989105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.10	chr10	-	3373	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-23	intron_retention	FALSE	canonical	3	665	junction_1	30.5642411897657	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	81003570	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.11	chr10	-	3191	7	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-1139	-24	intron_retention	FALSE	canonical	3	608	junction_1	49.3445933095906	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGTCAGTCCGGCATC	6370	False	NA	-22	True	AATAAA	-13	NA	80994984	80989123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993362_80993484_80993527_80993766
ES.3373.12	chr10	-	4588	8	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-60	-26	intron_retention	FALSE	canonical	3	675	junction_4	30.5366958906554	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTAGTCAGTCCGGCA	NA	False	NA	-24	True	AATAAA	-11	NA	81003608	80989125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80991586_80991666_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.13	chr10	-	2345	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-31	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	209.19139561655	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACGAAGAGTAGTCAGTC	NA	False	NA	-29	True	AATAAA	-6	NA	81003570	80989130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993844_80999618_81000025_81003518
ES.3373.14	chr10	-	2327	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	212.817879887946	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003569	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991437_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.15	chr10	-	2497	9	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-43	intron_retention	FALSE	canonical	3	608	junction_1	44.0736244822229	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003570	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990413_80991424_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.16	chr10	-	2410	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	212.817879887946	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003570	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990482_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.17	chr10	-	2295	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-40	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	210.664876047242	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003588	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999682_81000025_81003518
ES.3373.18	chr10	-	2211	10	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-20	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	347.694026124219	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003568	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80991424_80991586_80991666_80991741_80992845_80992952_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81002733_81002866_81003518
ES.3373.19	chr10	-	2406	10	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-5	-43	intron_retention	FALSE	canonical	0	0	junction_8	221.518998432791	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003553	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999611_81000025_81003518
ES.3373.2	chr10	-	2484	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-60	-13	intron_retention	FALSE	canonical	3	608	junction_1	41.6362852199086	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGCATCTGAACATCTGT	NA	False	NA	-11	True	AATAAA	-24	NA	81003608	80989112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.20	chr10	-	5567	10	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-3872	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	221.020081764553	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	3637	False	NA	-41	True	TTTAAA	-6	NA	80997717	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80995351_80995532
ES.3373.22	chr10	-	4266	9	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-3329	-43	intron_retention	FALSE	non_canonical	0	0	junction_8	229.231187886814	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	4180	False	NA	-41	True	TTTAAA	-6	NA	80997174	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80995466_80996645
ES.3373.23	chr10	-	2288	12	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-20	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	203.036087660696	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003568	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80989399_80989449_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.24	chr10	-	2159	10	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.038907555731	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003570	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80991475_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.25	chr10	-	2440	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-40	-43	intron_retention	FALSE	canonical	3	608	junction_2	42.806483874857	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003588	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.26	chr10	-	3437	9	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-25	-43	intron_retention	FALSE	canonical	3	665	junction_1	32.0039060116105	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003573	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.27	chr10	-	1609	6	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-16	-43	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	265.92735850228	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATGAACGAA	NA	False	NA	-41	True	TTTAAA	-6	NA	81003564	80989142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991730_80999880_81000025_81003518
ES.3373.29	chr10	-	2343	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	212.817879887946	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGCAAATAAAAAAAATGAA	NA	False	NA	-45	True	TTTAAA	-2	NA	81003569	80989146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991417_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.3	chr10	-	4759	6	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-60	-17	intron_retention	FALSE	canonical	3	675	junction_2	33.4245418816773	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCGGCATCTGAACAT	NA	False	NA	-15	True	AATAAA	-20	NA	81003608	80989116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80992952_80993060_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.30	chr10	-	2351	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	-47	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	208.030382396418	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGCAAATAAAAAAAATGAA	NA	False	NA	-45	True	TTTAAA	-2	NA	81003569	80989146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992967_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.31	chr10	-	2414	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-51	intron_retention	FALSE	canonical	3	608	junction_2	42.7805193926648	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGCAAATAAAAAAAA	NA	False	NA	-49	True	NA	NA	NA	81003570	80989150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80990413_80991424_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.32	chr10	-	1924	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-19	-51	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	220.711363941324	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGCAAATAAAAAAAA	NA	False	NA	-49	True	NA	NA	NA	81003567	80989150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_81003518
ES.3373.33	chr10	-	1857	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	73	641	73	328	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGAGCAGCCCGCAGG	NA	False	NA	2	True	AATAAA	-32	NA	81003684	80989740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.35	chr10	-	2723	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	297	intron_retention	FALSE	canonical	3	665	junction_1	30.5642411897657	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAAACAGGCCGGCAGC	NA	False	NA	-29	True	AATAAA	-1	NA	81003569	80989771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.36	chr10	-	1672	10	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	283.680484496115	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACACTTAAACAGGCCGG	NA	False	NA	-33	True	AGTAAA	-37	NA	81003569	80989775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993766_80993852_80999611_81000025_81003518
ES.3373.37	chr10	-	1749	10	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	260	intron_retention	FALSE	canonical	3	608	junction_1	41.6362852199086	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAAAGTACAA	NA	False	NA	-66	True	ATTAAA	-13	NA	81003569	80989808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.39	chr10	-	1713	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-60	245	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	208.030382396418	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGTAAAATGACAAA	NA	False	NA	-81	True	NA	NA	NA	81003608	80989823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992967_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.4	chr10	-	3532	8	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-22	-20	intron_retention	FALSE	canonical	3	675	junction_4	30.6913535653524	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCAGTCCGGCATCTGAA	NA	False	NA	-18	True	AATAAA	-17	NA	81003570	80989119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80991586_80991666_80991741_80992845_80992952_80993060_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.3373.41	chr10	-	1233	2	FSM	ENSMUSG00000004934.15	ENSMUST00000129549.2	1178	2	-24	-31	-24	31	multi-exon	FALSE	canonical	3	682	junction_1	0	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGTAAGTTCCAAGTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	81003572	80998845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81000025_81003518
ES.3373.5	chr10	-	4847	11	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-15	-23	intron_retention	FALSE	non_canonical	0	0	junction_8	278.533032152382	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	81003563	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993362_80993484_80993527_80993766_80995351_80995532_80996063_80999235_81000025_81003518
ES.3373.6	chr10	-	5174	3	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-9	-23	intron_retention	FALSE	canonical	3	682	junction_2	21	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	81003557	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80993852_80999618_81000025_81003518
ES.3373.7	chr10	-	5942	7	NNC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	3812	-23	intron_retention	FALSE	non_canonical	0	0	junction_5	322.047313639195	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	1618	False	NA	-21	True	AATAAA	-14	NA	80999736	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80990207_80990281_80990413_80991424_80992952_80993060_80993362_80993484_80995351_80995532_80996063_80999233
ES.3373.8	chr10	-	7749	2	NNC	ENSMUSG00000004934.15	novel	797	3	NA	NA	-3208	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	4301	False	NA	-21	True	AATAAA	-14	NA	80997053	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_80995351_80995532
ES.3373.9	chr10	-	4558	8	NIC	ENSMUSG00000004934.15	novel	2571	11	NA	NA	-21	-23	intron_retention	FALSE	canonical	3	665	junction_1	33.8387532939645	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGTCAGTCCGGCATCT	NA	False	NA	-21	True	AATAAA	-14	NA	81003569	80989122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_80990207_80990281_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ES.33730.1	chr8	+	4720	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-555	8	combination_of_known_junctions	TRUE	canonical	3	15	junction_36	9.80481538199191	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412350	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.10	chr8	+	4520	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-307	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	11.0844466911413	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412598	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424225_106424274_106424499_106424578_106424662
ES.33730.11	chr8	+	4605	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-242	13	intron_retention	FALSE	canonical	0	0	junction_6	11.195519817691	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATACTGTCTGTCCGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	106412663	106424832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414508_106414701_106414779_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.12	chr8	+	4421	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-163	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.7489068566203	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412742	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414779_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424584_106424662
ES.33730.13	chr8	+	4273	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-136	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	11.6372616319615	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGCGTGGAATACTG	NA	False	NA	NA	False	ATTAAA	-10	NA	106412769	106424822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414287_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.14	chr8	+	4360	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-131	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.0860397351042	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGCGTGGAATACTG	NA	False	NA	NA	False	ATTAAA	-10	NA	106412774	106424822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415335_106415428_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.15	chr8	+	1105	1	Genic_Genomic	ENSMUSG00000050357.10	novel	NA	NA	NA	NA	-127	-10892	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106412778	106413883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_106412800_106413900
ES.33730.16	chr8	+	5150	34	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-120	3	intron_retention	FALSE	canonical	3	28	junction_17	8.37723970572861	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGCGTGGAATACTG	NA	False	NA	NA	False	ATTAAA	-10	NA	106412785	106424822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.17	chr8	+	6052	30	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-107	47816	intron_retention	FALSE	non_canonical	0	0	junction_28	14.3036544393748	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAACAAAAAAGTGGAA	NA	False	NA	NA	False	NA	NA	NA	106412798	106472635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414508_106414701_106414773_106414889_106414964_106415096_106415683_106415767_106415881_106415975_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662_106424832_106445496_106445573_106472599
ES.33730.18	chr8	+	6460	28	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-107	8	intron_retention	FALSE	canonical	3	15	junction_26	10.5574397278735	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412798	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413429_106414000_106414064_106414184_106414773_106414889_106414964_106415096_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106419062_106419148_106419263_106419434_106419596_106419669_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.19	chr8	+	5125	22	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-104	5	intron_retention	FALSE	canonical	0	0	junction_1	16.8325082306035	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412801	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106414889_106414964_106415096_106415596_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416897_106417009_106417107_106417188_106417247_106417378_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.2	chr8	+	4602	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	-348	-60	-348	16	multi-exon	FALSE	canonical	3	28	junction_20	8.5824984578148	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTCTGTCCGTCAGC	NA	False	NA	NA	False	ATTAAA	-23	NA	106412557	106424835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.20	chr8	+	4353	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-101	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.0874139420533	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412804	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414779_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.21	chr8	+	4403	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-100	5	intron_retention	FALSE	canonical	3	4	junction_5	10.68883895965	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412805	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414287_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.22	chr8	+	4427	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-97	10	intron_retention	FALSE	canonical	3	28	junction_19	8.69766515271993	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAATACTGTCTGTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	106412808	106424829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.23	chr8	+	4315	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-92	8	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	10.6511349583167	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412813	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414287_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.25	chr8	+	4739	36	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-66	5	intron_retention	FALSE	canonical	3	28	junction_18	8.86561806494445	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412839	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.26	chr8	+	5200	34	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-32	5	intron_retention	FALSE	canonical	3	28	junction_19	8.35341931936072	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412873	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.27	chr8	+	4432	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-26	5	intron_retention	FALSE	canonical	3	28	junction_20	8.62268060936745	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412879	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.3	chr8	+	4950	36	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-336	8	intron_retention	FALSE	canonical	0	0	junction_20	11.2480746651802	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412569	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417556_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.30	chr8	+	4265	39	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-13	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	10.7998666248048	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412892	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424584_106424662
ES.33730.31	chr8	+	3999	33	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	1552	8	intron_retention	FALSE	canonical	2	3	junction_2	11.4630861355047	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106414457	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106414508_106414701_106414769_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.32	chr8	+	4247	31	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	1564	5	intron_retention	FALSE	canonical	0	0	junction_15	11.8650279767428	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106414469	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.33	chr8	+	3931	23	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-1908	8	intron_retention	FALSE	canonical	3	28	junction_8	9.16255855854919	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	223	False	NA	NA	False	ATTAAA	-15	NA	106415629	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499
ES.33730.34	chr8	+	3187	14	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-62	8	intron_retention	FALSE	canonical	3	15	junction_12	11.5855449621934	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	2069	False	NA	NA	False	ATTAAA	-15	NA	106417475	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.35	chr8	+	2176	16	ISM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	6024	-49	1392	5	3prime_fragment	FALSE	canonical	3	29	junction_6	9.58795540711829	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	3523	False	NA	NA	False	ATTAAA	-12	NA	106418929	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.36	chr8	+	1007	8	NNC	ENSMUSG00000050357.10	novel	2526	17	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.7640963280481	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	6305	False	NA	NA	False	ATTAAA	-12	NA	106421711	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106421758_106421933_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33730.37	chr8	+	2015	4	NIC	ENSMUSG00000050357.10	novel	2235	8	NA	NA	782	5	intron_retention	FALSE	canonical	3	56	junction_2	2.05480466765633	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	7071	False	NA	NA	False	ATTAAA	-12	NA	106422477	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106423530_106423655_106423728_106423848_106424578_106424662
ES.33730.38	chr8	+	1277	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	-4	0	-1	0	multi-exon	FALSE	canonical	2	20	junction_1	3	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427781	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106427950_106428805_106429029_106429239
ES.33730.39	chr8	+	1239	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	9	-570	3	0	multi-exon	FALSE	canonical	0	0	junction_1	13	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427788	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106427919_106428805_106429029_106429239
ES.33730.4	chr8	+	5049	36	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-336	5	intron_retention	FALSE	canonical	3	28	junction_17	8.82362320878517	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412569	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.41	chr8	+	1127	3	NIC	ENSMUSG00000005699.17	novel	1273	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427810	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106427919_106428805_106428939_106429239
ES.33730.42	chr8	+	2922	2	ISM	ENSMUSG00000005699.17	ENSMUST00000211888.2	1179	3	7	-1449	5	1449	intron_retention	FALSE	canonical	3	15	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTACTTCCTTCGGCCT	NA	False	NA	NA	False	NA	NA	NA	106428285	106431577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106428436_106428805
ES.33730.43	chr8	+	1465	2	ISM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	10	0	10	0	intron_retention	FALSE	canonical	3	15	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106428290	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106428436_106428805
ES.33730.44	chr8	+	1236	3	NNC	ENSMUSG00000005699.17	novel	1265	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106428296	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106428424_106428805_106429029_106429239
ES.33730.45	chr8	+	1242	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	24	-1	22	0	multi-exon	FALSE	canonical	3	15	junction_1	5.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106428302	106430125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106428436_106428805_106429029_106429239
ES.33730.46	chr8	+	1697	2	NNC	ENSMUSG00000005699.17	novel	1179	3	NA	NA	1445	1414	intron_retention	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106429725	106431542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106431146_106431265
ES.33730.47	chr8	+	1429	2	NNC	ENSMUSG00000005699.17	novel	1179	3	NA	NA	1445	1411	intron_retention	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106429725	106431539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106430884_106431268
ES.33730.48	chr8	+	1760	2	NNC	ENSMUSG00000005699.17	novel	1179	3	NA	NA	1446	1449	intron_retention	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTACTTCCTTCGGCCT	NA	False	NA	NA	False	NA	NA	NA	106429726	106431577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106430653_106430743
ES.33730.49	chr8	+	1604	3	NNC	ENSMUSG00000005699.17	novel	1179	3	NA	NA	1447	1414	intron_retention	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106429727	106431542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106430653_106430743_106431146_106431265
ES.33730.5	chr8	+	5130	37	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-334	8	intron_retention	FALSE	canonical	3	28	junction_20	8.1040208736767	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412571	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.6	chr8	+	4504	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-333	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	11.725369721502	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412572	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424584_106424662
ES.33730.7	chr8	+	5022	36	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-332	3	intron_retention	FALSE	canonical	3	28	junction_18	8.57333312174014	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGCGTGGAATACTG	NA	False	NA	NA	False	ATTAAA	-10	NA	106412573	106424822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499
ES.33730.8	chr8	+	4791	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-325	8	intron_retention	FALSE	canonical	0	0	junction_26	13.0311196890605	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGGAATACTGTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	106412580	106424827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419790_106419887_106420029_106420131_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ES.33730.9	chr8	+	4492	38	NNC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-324	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.030397341315	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCGTGGAATACTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	106412581	106424824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414779_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ES.33731.1	chr8	+	175	1	Intergenic	novelGene_27439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCAGTAGCTCAACT	NA	False	NA	NA	False	NA	NA	NA	106480206	106480381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106480200_106480400
ES.33732.1	chr8	-	1426	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-1	1729	0	9	multi-exon	TRUE	canonical	3	179	junction_7	13.7637204272682	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCAGGGGTTGGGGCCG	NA	False	NA	-3	True	AATAAA	-26	NA	106427717	106424779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33732.10	chr8	-	1497	11	ISM	ENSMUSG00000038000.11	ENSMUST00000211870.2	2722	12	29	2300	-3	-2	5prime_fragment	FALSE	canonical	3	32	junction_7	55.0807588909231	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGGAGAGAGATTCAG	NA	False	NA	-15	True	AATAAA	-14	NA	106427688	106424791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33732.11	chr8	-	2161	6	NIC	ENSMUSG00000038000.11	novel	1182	9	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	202	junction_4	10.4307238483242	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGGAGAGAGATTCAG	NA	False	NA	-15	True	AATAAA	-14	NA	106427764	106424791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426528_106426635_106427472_106427551
ES.33732.12	chr8	-	1323	10	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	83.4732159304874	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGGAGAGAGATTCAG	NA	False	NA	-15	True	AATAAA	-14	NA	106427686	106424791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425122_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
ES.33732.13	chr8	-	1384	11	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.1367933784025	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGGAGAGAGATTCAG	NA	False	NA	-15	True	AATAAA	-14	NA	106427701	106424791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425122_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426983_106427074_106427173_106427334_106427472_106427551
ES.33732.14	chr8	-	1579	12	NNC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.0553731752764	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAGGAGAGAGATTCA	NA	False	NA	-16	True	AATAAA	-13	NA	106427712	106424792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106425795_106425902_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426746_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33732.15	chr8	-	1894	8	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	202	junction_6	9.89124535606501	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGAGGAGAGAGATTCA	NA	False	NA	-16	True	AATAAA	-13	NA	106427715	106424792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106427472_106427551
ES.33732.2	chr8	-	1449	10	NIC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	78.7386676149513	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427687	106424788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106427035_106427334_106427472_106427551
ES.33732.3	chr8	-	1364	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	60.9681155286196	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427715	106424789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
ES.33732.4	chr8	-	1656	10	NIC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_6	57.9516614233656	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427715	106424789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33732.5	chr8	-	1415	11	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	63.1269356138883	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427717	106424789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427463_106427543
ES.33732.7	chr8	-	1347	9	NNC	ENSMUSG00000038000.11	novel	1182	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	96.1925153013476	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427684	106424789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426438_106426528_106426635_106426793_106426913_106427035_106427334_106427472_106427551
ES.33732.8	chr8	-	1531	12	NNC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.3369687125039	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGAGAGATTCAGGG	NA	False	NA	-13	True	AATAAA	-16	NA	106427722	106424789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106424961_106425039_106425132_106425245_106425596_106425795_106425906_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33732.9	chr8	-	1647	10	NIC	ENSMUSG00000038000.11	novel	2722	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	32	junction_6	57.7839740267229	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGGAGAGAGATTCAGG	NA	False	NA	-14	True	AATAAA	-15	NA	106427723	106424790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106424961_106425039_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ES.33733.1	chr8	-	1306	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	17	17	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	58.9551887938143	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGTCTTAGAAATGCTAA	NA	False	NA	3	True	ATTAAA	-32	NA	106434825	106430265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434802
ES.33733.10	chr8	-	1327	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	69.9069352198817	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTGTTCCATAGGA	NA	False	NA	-16	True	ATTAAA	-13	NA	106434830	106430284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430903_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
ES.33733.11	chr8	-	1387	7	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	6	junction_6	61.1873262113069	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTGTTCCATAGGA	NA	False	NA	-16	True	ATTAAA	-13	NA	106434845	106430284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434556_106434802
ES.33733.12	chr8	-	1303	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	77.5236632735253	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTGTTCCATAGGA	NA	False	NA	-16	True	ATTAAA	-13	NA	106434820	106430284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430903_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434802
ES.33733.13	chr8	-	1290	5	ISM	ENSMUSG00000013155.11	ENSMUST00000212061.2	1673	6	461	2	184	-1	3prime_fragment	FALSE	canonical	3	158	junction_2	10.9316055545377	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTGTTCCATAGGA	NA	False	NA	-16	True	ATTAAA	-13	NA	106434381	106430284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106430654_106430744_106430882_106430982_106431393_106433197_106433371_106434180
ES.33733.15	chr8	-	188	1	ISM	ENSMUSG00000013155.11	ENSMUST00000212162.2	3354	4	1337	2850	1245	-2849	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATGTGTGTGCGTGCG	NA	False	NA	NA	False	NA	NA	NA	106433320	106433132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106433100_106433300
ES.33733.16	chr8	-	4285	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	59	8	-9	-8	multi-exon	FALSE	canonical	3	21	junction_1	4	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTTCCACTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	106485237	106440493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106444283_106454619_106454964_106485085
ES.33733.17	chr8	-	192	1	ISM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	44428	191	44360	-191	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGACTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	106440868	106440676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106440700_106440900
ES.33733.18	chr8	-	2044	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	51	2257	-17	1306	multi-exon	FALSE	canonical	3	21	junction_1	4	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATGGTGTGTGGTCGT	NA	False	NA	NA	False	AGTAAA	-19	NA	106485245	106442742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106444283_106454619_106454964_106485085
ES.33733.19	chr8	-	2269	4	FSM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	-22	-1296	12	1296	multi-exon	FALSE	canonical	2	4	junction_2	11.1455023315337	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACTGACATCATGGT	NA	False	NA	NA	False	AGTAAA	-9	NA	106485284	106442752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106444283_106449480_106449677_106454619_106454964_106485085
ES.33733.2	chr8	-	1388	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_7	49.3529562003563	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTCCATAGGAGCTGT	NA	False	NA	-11	True	ATTAAA	-18	NA	106434794	106430279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434675
ES.33733.20	chr8	-	4140	2	ISM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	17	6935	-17	2749	5prime_fragment	FALSE	canonical	3	29	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGACCCAGATAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	106485245	106450983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106454964_106485085
ES.33733.21	chr8	-	4031	2	ISM	ENSMUSG00000013150.16	ENSMUST00000155038.3	951	4	23	7038	-11	2646	5prime_fragment	FALSE	canonical	3	29	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAATATGCATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	106485239	106451086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106454964_106485085
ES.33733.22	chr8	-	2819	2	NNC	ENSMUSG00000013150.16	novel	4352	3	NA	NA	-9	-12052	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	106485237	106465784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106468452_106485085
ES.33733.23	chr8	-	2715	1	NIC	ENSMUSG00000013150.16	novel	4352	3	NA	NA	-9	-28790	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106485237	106482522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106482500_106485200
ES.33733.4	chr8	-	1299	8	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_7	45.9436211734623	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	-12	True	ATTAAA	-17	NA	106434819	106430280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106434788
ES.33733.6	chr8	-	1192	7	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.3556002425738	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCATAGGAGCTG	NA	False	NA	-12	True	ATTAAA	-17	NA	106434808	106430280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430978_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434788
ES.33733.8	chr8	-	2416	10	Fusion	ENSMUSG00000013150.16_ENSMUSG00000013155.11	novel	1275	7	NA	NA	-6	0	multi-exon	FALSE	canonical	0	0	junction_7	74.0150134920086	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106485234	106430282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455_106434556_106443625_106444283_106454619_106454964_106485085
ES.33733.9	chr8	-	1432	7	NNC	ENSMUSG00000013155.11	novel	1275	7	NA	NA	14	-1	intron_retention	FALSE	canonical	3	34	junction_6	50.8887675884047	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGTGTTCCATAGGA	NA	False	NA	-16	True	ATTAAA	-13	NA	106434763	106430284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434556_106434675
ES.33734.1	chr8	+	172	1	Intergenic	novelGene_27440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTGGATGTACTTT	NA	False	NA	9	True	NA	NA	NA	106486335	106486507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106486300_106486500
ES.33735.1	chr8	+	3562	3	Antisense	novelGene_ENSMUSG00000037415.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106500628	106504461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_106500745_106500917_106501070_106501167
ES.33735.2	chr8	+	3855	1	Antisense	novelGene_ENSMUSG00000037415.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATGTA	NA	False	NA	NA	False	NA	NA	NA	106500628	106504483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_106500600_106504500
ES.33735.3	chr8	+	2442	3	Antisense	novelGene_ENSMUSG00000037415.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATGTA	NA	False	NA	NA	False	NA	NA	NA	106500628	106504483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_106501070_106501167_106501278_106502592
ES.33735.4	chr8	+	2219	4	Antisense	novelGene_ENSMUSG00000037415.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATATATATATGTA	NA	False	NA	NA	False	NA	NA	NA	106500678	106504483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_106500745_106500917_106501070_106501167_106501278_106502592
ES.33736.1	chr8	+	174	1	Intergenic	novelGene_27441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106523626	106523800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106523600_106523800
ES.33737.1	chr8	+	221	1	Intergenic	novelGene_27443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	106529149	106529370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106529100_106529400
ES.33738.1	chr8	+	188	1	Intergenic	novelGene_27445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGTCAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	106530964	106531152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106531000_106531200
ES.33739.1	chr8	+	178	1	Intergenic	novelGene_27447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGAGTAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	106533796	106533974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106533800_106534000
ES.3374.1	chr10	-	152	1	Intergenic	novelGene_2603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAATAAATAATTCT	7063	False	NA	NA	False	NA	NA	NA	81007856	81007704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81007700_81007900
ES.33740.1	chr8	-	5166	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	142	0	-3	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553840	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.12	chr8	-	6134	14	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_9	27.0360268079859	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTCTGTTGTTCAGA	NA	False	NA	-3	True	ATTAAA	-17	NA	106553840	106494941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513134_106513427_106526848_106526946_106532163_106532217_106552709_106552822_106553581
ES.33740.13	chr8	-	5336	5	NIC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	52399	-2	intron_retention	FALSE	canonical	3	41	junction_3	9.52299847737046	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTCTGTTGTTCAGA	NA	False	NA	-3	True	ATTAAA	-17	NA	106501438	106494941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106501068_106501166
ES.33740.14	chr8	-	6598	11	NIC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	57	junction_1	6.14491659829489	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTCTGTTGTTCAGA	NA	False	NA	-3	True	ATTAAA	-17	NA	106553840	106494941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106498350_106498726_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.15	chr8	-	5010	13	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.5271957902516	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTGTCTGTTGTTCAG	NA	False	NA	-4	True	ATTAAA	-16	NA	106553839	106494942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500685_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506656_106513254_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.16	chr8	-	5260	14	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.4772369152876	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTGTCTGTTGTTCAG	NA	False	NA	-4	True	ATTAAA	-16	NA	106553813	106494942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513134_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.17	chr8	-	4487	11	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	40472	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.9874967430951	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAATTGTGTCTGTTGTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	106513365	106494944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500685_106500746_106500918_106501068_106501166_106501276_106502591_106502661_106506458_106506644_106508911_106508935_106513258
ES.33740.18	chr8	-	3440	15	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.819388660807	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAATTGTGTCTGTTGTT	NA	False	NA	-7	True	ATTAAA	-13	NA	106553838	106494945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106495504_106497221_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.19	chr8	-	6865	9	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	40508	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	25.7606167433934	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAATTGTGTCTGTTGT	NA	False	NA	-8	True	ATTAAA	-12	NA	106513329	106494946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106504972_106506655_106513254
ES.33740.2	chr8	-	5914	13	NIC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	41	junction_3	9.13289232511926	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553839	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.20	chr8	-	6338	12	NIC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	10	-7	intron_retention	FALSE	canonical	3	50	junction_2	7.14084977696563	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAATTGTGTCTGTTGT	NA	False	NA	-8	True	ATTAAA	-12	NA	106553827	106494946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106498350_106498726_106498839_106499080_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.21	chr8	-	2294	10	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	46011	-2289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.9505561666342	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACCTGCCTTCATCCC	NA	False	NA	NA	False	NA	NA	NA	106507826	106497228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106507794
ES.33740.22	chr8	-	2503	13	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-3	-2661	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.2303290547914	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGTGATTTGTTTATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	106553840	106497600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506661_106513254_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.23	chr8	-	2503	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	143	2662	-2	-2662	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGATTTGTTTATT	NA	False	NA	NA	False	ATTAAA	-24	NA	106553839	106497601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.24	chr8	-	173	1	Intergenic	novelGene_27442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATAAACAAACAAAAATT	NA	False	NA	NA	False	NA	NA	NA	106526710	106526537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106526500_106526700
ES.33740.25	chr8	-	157	1	Intergenic	novelGene_27444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106530663	106530506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106530500_106530700
ES.33740.26	chr8	-	1852	3	FSM	ENSMUSG00000037415.8	ENSMUST00000212856.2	1426	3	-426	0	-281	0	multi-exon	FALSE	canonical	3	69	junction_2	3.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	106554263	106531158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106532217_106552709_106552822_106553581
ES.33740.27	chr8	-	181	1	Intergenic	novelGene_27446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGAAGTC	NA	False	NA	NA	False	NA	NA	NA	106533086	106532905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106532900_106533100
ES.33740.3	chr8	-	5332	14	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	26.9239560296035	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553837	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106504972_106505142_106506458_106506653_106513244_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.4	chr8	-	5163	13	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.2303290547914	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553839	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506661_106513254_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.6	chr8	-	7178	11	NIC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_9	19.672569735548	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553840	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106500746_106500918_106501068_106501166_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106552709_106552822_106553581
ES.33740.7	chr8	-	4559	9	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	21.5460988348239	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553839	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501232_106552729_106552822_106553581
ES.33740.8	chr8	-	5166	13	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.2303290547914	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553840	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506653_106513244_106513427_106532163_106532217_106552709_106552822_106553581
ES.33740.9	chr8	-	5268	15	NNC	ENSMUSG00000037415.8	novel	5308	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	22.6613264017293	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553839	106494939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508698_106508802_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ES.33741.1	chr8	-	252	1	Intergenic	novelGene_27448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGATCTGAACAATG	NA	False	NA	NA	False	NA	NA	NA	106561576	106561324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106561300_106561600
ES.33742.1	chr8	-	2442	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	56	-684	-3	680	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGTCTGTGTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	106578630	106570624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.10	chr8	-	2343	12	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-4	4	intron_retention	FALSE	canonical	0	0	junction_7	99.8546878102673	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578644	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572236_106573024_106573279_106573433_106573615_106573811_106575382_106575420_106575818_106575956_106576049_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.11	chr8	-	3863	8	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	4	intron_retention	FALSE	canonical	1	8	junction_6	99.6041143318725	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578638	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571811_106571891_106572069_106572947_106573024_106573279_106575532_106575644_106576182_106576257_106576342_106576464_106576556_106578502
ES.33742.12	chr8	-	2812	10	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	4	intron_retention	FALSE	canonical	3	191	junction_7	17.4164673034842	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578618	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.13	chr8	-	3761	8	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	4	intron_retention	FALSE	canonical	1	2	junction_3	78.7926755116598	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578638	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571811_106571891_106572069_106572947_106573024_106573305_106573433_106573615_106575956_106576056_106576154_106576257_106576556_106578502
ES.33742.14	chr8	-	2653	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	4	intron_retention	FALSE	canonical	3	191	junction_9	18.3816293489087	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578638	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.15	chr8	-	3846	9	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	4	intron_retention	FALSE	canonical	3	157	junction_3	30.1928696052561	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578638	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573433_106573615_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.17	chr8	-	2223	4	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	1	intron_retention	TRUE	non_canonical	0	0	junction_3	115.380529842199	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAGCGATATTGTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	106578638	106571303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571628_106571705_106571811_106571891_106572275_106577227
ES.33742.18	chr8	-	4863	6	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	191	junction_4	21.5443728151924	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTTAGCGATATTGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	106578634	106571305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106576154_106576257_106576556_106578502
ES.33742.19	chr8	-	2006	11	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	157	junction_3	27.2690300524239	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578632	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.2	chr8	-	1847	14	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-11	7	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	76.1652672088405	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATATTGTATTTCTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	106578651	106571297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.21	chr8	-	874	5	NIC	ENSMUSG00000036672.6	novel	1762	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	6	junction_3	108.550391523937	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	125	False	NA	NA	False	ATTAAA	-14	NA	106573336	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106572069_106572796_106572854_106572947_106573024_106573279
ES.33742.23	chr8	-	3271	2	ISM	ENSMUSG00000036672.6	ENSMUST00000212803.2	562	4	-1326	-399	-1326	-2	intron_retention	FALSE	canonical	3	251	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106574658	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106571811_106571891
ES.33742.25	chr8	-	2729	3	NIC	ENSMUSG00000036672.6	novel	1762	12	NA	NA	-964	-2	intron_retention	FALSE	canonical	3	217	junction_2	10.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106574296	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106573433_106573615
ES.33742.26	chr8	-	1730	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	63.6958163837578	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578635	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576402_106578502
ES.33742.27	chr8	-	3669	9	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	157	junction_3	29.3702123758069	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578622	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.28	chr8	-	1950	13	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	17	-2	intron_retention	FALSE	canonical	3	26	junction_3	56.8391370448215	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578669	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.29	chr8	-	2227	10	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	26	junction_3	65.2086868408357	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106578601	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573279_106573433_106573615_106573811_106575382_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.3	chr8	-	1748	13	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	7	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	92.3498781807534	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATATTGTATTTCTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	106578640	106571297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576464_106576556_106578502
ES.33742.30	chr8	-	3962	4	NIC	ENSMUSG00000036672.6	novel	1762	12	NA	NA	-2278	-2	intron_retention	FALSE	canonical	3	217	junction_3	14.0079342596338	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGTTAGCGATATTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	106575610	106571306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106573433_106573615
ES.33742.31	chr8	-	2031	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	-11	0	intron_retention	FALSE	canonical	3	26	junction_3	59.2787225077326	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578651	106571308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.33	chr8	-	5383	2	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	247	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578638	106571308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106576556_106578502
ES.33742.34	chr8	-	1887	13	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	94.774696283109	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578618	106571308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573020_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576148_106576257_106576346_106576464_106576556_106578502
ES.33742.35	chr8	-	2010	12	NNC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_4	81.8923905888919	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578638	106571308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106573024_106573305_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576556_106578502
ES.33742.38	chr8	-	2804	3	NNC	ENSMUSG00000036672.6	novel	348	3	NA	NA	-10	-1	intron_retention	TRUE	canonical	0	0	junction_1	123.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGAAAGTTAGCGATAT	NA	False	NA	NA	False	ATTAAA	-11	NA	106578650	106571309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106572292_106574881_106576556_106578502
ES.33742.39	chr8	-	4542	8	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	12	junction_6	77.3003682965063	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGAAAGTTAGCGATAT	NA	False	NA	NA	False	ATTAAA	-11	NA	106578638	106571309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571811_106571891_106573024_106573279_106573433_106573615_106575532_106575644_106575688_106575818_106576182_106576257_106576556_106578502
ES.33742.4	chr8	-	2751	10	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	27	7	intron_retention	FALSE	canonical	3	191	junction_7	16.1390562240321	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATATTGTATTTCTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	106578574	106571297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.40	chr8	-	4838	5	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	191	junction_3	20.1680440300987	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGAAAGTTAGCGATA	NA	False	NA	NA	False	ATTAAA	-10	NA	106578638	106571310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106573024_106573279_106573433_106573615_106576154_106576257_106576556_106578502
ES.33742.41	chr8	-	1860	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	-9	intron_retention	FALSE	canonical	3	157	junction_3	25.3106321369806	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATACTAGAAGAAAGTT	NA	False	NA	NA	False	ATTAAA	-3	NA	106578640	106571317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.42	chr8	-	1713	1	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	2	-446	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106578638	106576925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106576900_106578600
ES.33742.6	chr8	-	1788	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	35	-9	-11	5	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCGATATTGTATTTCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	106578651	106571299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ES.33742.7	chr8	-	5135	3	NIC	ENSMUSG00000036672.6	novel	3281	6	NA	NA	2	4	intron_retention	FALSE	canonical	3	227	junction_1	10	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCGATATTGTATTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	106578638	106571300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106573024_106573279_106576556_106578502
ES.33743.1	chr8	+	1872	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	-53	0	-53	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTTCGACTTTTTT	NA	False	NA	12	True	ATTAAA	-19	NA	106581710	106583582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106581700_106583600
ES.33744.1	chr8	+	990	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	-31	-11	-31	11	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTTTTAATTAGTTAA	NA	False	NA	3	True	AATAAA	-26	NA	106587180	106605973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.10	chr8	+	4669	3	ISM	ENSMUSG00000008450.9	ENSMUST00000212042.2	645	5	-327	-1417	-9	1066	intron_retention	FALSE	canonical	3	273	junction_1	1621.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACTATGGTCTCTTTA	NA	False	NA	22	True	AATAAA	-9	NA	106587287	106607028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106587789_106602165_106602291_106602985
ES.33744.11	chr8	+	680	6	NNC	ENSMUSG00000008450.9	novel	948	5	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1423.32970179084	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	-5	True	AATAAA	-18	NA	106587288	106605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436_106605744_106605937
ES.33744.12	chr8	+	888	5	NNC	ENSMUSG00000008450.9	novel	948	5	NA	NA	-8	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1489.99471475573	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTTTTAATTAGTTAA	NA	False	NA	3	True	AATAAA	-26	NA	106587288	106605973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603247_106605436
ES.33744.13	chr8	+	3850	2	ISM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	77	-4	-8	4	intron_retention	FALSE	canonical	3	2641	junction_1	0	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTTAAATTGTTTTAAT	NA	False	NA	-4	True	AATAAA	-19	NA	106587288	106605966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106587338_106602165
ES.33744.14	chr8	+	3521	4	ISM	ENSMUSG00000008450.9	ENSMUST00000212042.2	645	5	-326	-354	-8	3	intron_retention	FALSE	canonical	3	273	junction_1	1588.61875714583	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	-5	True	AATAAA	-18	NA	106587288	106605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106587789_106602165_106602291_106602985_106603058_106603141
ES.33744.15	chr8	+	1070	6	NIC	ENSMUSG00000008450.9	novel	948	5	NA	NA	-8	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1798.13732512286	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTTTTAATTAGTTA	NA	False	NA	2	True	AATAAA	-25	NA	106587288	106605972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106587338_106601179_106601369_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.17	chr8	+	965	6	NNC	ENSMUSG00000008450.9	novel	948	5	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	1731.91655688142	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTTAAATTGTTTTAAT	NA	False	NA	-4	True	AATAAA	-19	NA	106587296	106605966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106587338_106587690_106587789_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.18	chr8	+	2161	6	NNC	ENSMUSG00000008450.9	novel	948	5	NA	NA	7	1069	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1734.98756191507	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGGTCTCTTTATTC	NA	False	NA	25	True	AATAAA	-12	NA	106587303	106607031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106587338_106593069_106593306_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.19	chr8	+	1302	5	FSM	ENSMUSG00000008450.9	ENSMUST00000212042.2	645	5	-303	-354	15	3	multi-exon	FALSE	canonical	3	273	junction_1	1472.58692442925	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	-5	True	AATAAA	-18	NA	106587311	106605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587789_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.2	chr8	+	1884	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	-61	-1305	-7	-739	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTGTGTGTTGTATT	NA	False	NA	NA	False	TATAAA	-18	NA	106587235	106604726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
ES.33744.20	chr8	+	169	1	Intergenic	novelGene_27449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106597604	106597773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106597600_106597800
ES.33744.21	chr8	+	5530	2	NIC	ENSMUSG00000008450.9	novel	518	4	NA	NA	12737	3	intron_retention	FALSE	canonical	3	3757	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	-5	True	AATAAA	-18	NA	106600351	106605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106603058_106603141
ES.33744.22	chr8	+	3487	2	ISM	ENSMUSG00000008450.9	ENSMUST00000212042.2	645	5	14176	-361	14176	10	intron_retention	FALSE	canonical	3	3516	junction_1	0	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGTTTTAATTAGTTA	NA	False	NA	2	True	AATAAA	-25	NA	106601790	106605972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106602291_106602985
ES.33744.3	chr8	+	4189	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	-61	-3610	-7	1069	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGGTCTCTTTATTC	NA	False	NA	25	True	AATAAA	-12	NA	106587235	106607031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
ES.33744.4	chr8	+	1998	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	24	-1074	-7	1074	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTCTTTATTCCTAAC	NA	False	NA	30	True	AATAAA	-17	NA	106587235	106607036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ES.33744.5	chr8	+	4273	3	ISM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	24	-1069	-7	1069	intron_retention	FALSE	canonical	3	2641	junction_1	437.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGGTCTCTTTATTC	NA	False	NA	25	True	AATAAA	-12	NA	106587235	106607031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106587338_106602165_106602291_106602985
ES.33744.6	chr8	+	2501	1	NIC	ENSMUSG00000008450.9	novel	948	5	NA	NA	-7	-12465	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCAGGAGCCAGGAGGT	NA	False	NA	NA	False	NA	NA	NA	106587235	106589736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106587200_106589700
ES.33744.7	chr8	+	920	5	NNC	ENSMUSG00000008450.9	novel	948	5	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1483.81389921378	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTTTTAATTAGTTAA	NA	False	NA	3	True	AATAAA	-26	NA	106587243	106605973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106587338_106602165_106602291_106602985_106603058_106603148_106603241_106605436
ES.33744.8	chr8	+	3166	3	ISM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	65	-3	0	3	intron_retention	FALSE	canonical	3	2641	junction_1	437.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	False	NA	-5	True	AATAAA	-18	NA	106587276	106605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106587338_106602165_106602291_106602985
ES.33744.9	chr8	+	3079	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	-9	-2552	-9	11	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTTTTAATTAGTTAA	NA	False	NA	3	True	AATAAA	-26	NA	106587287	106605973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
ES.33745.1	chr8	-	179	1	Antisense	novelGene_ENSMUSG00000008450.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	106597057	106596878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106596900_106597100
ES.33746.1	chr8	+	4726	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-10	-11	intron_retention	TRUE	canonical	0	0	junction_21	112.010499690057	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3246	False	NA	3	True	ATTAAA	-10	NA	106607502	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616859_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.10	chr8	+	4705	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	110.977590126133	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3260	False	NA	14	True	AATAAA	-6	NA	106607516	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607785_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.100	chr8	+	1649	1	Intergenic	novelGene_27451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTGTTGTCAAGGA	NA	False	NA	NA	False	AATAAA	-7	NA	106632809	106634458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106632800_106634500
ES.33746.101	chr8	+	207	1	Intergenic	novelGene_27457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAATTTATC	8753	False	NA	NA	False	TATAAA	-6	NA	106645045	106645252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106645000_106645300
ES.33746.102	chr8	+	210	1	Intergenic	novelGene_27458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCAGCCAGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	106681277	106681487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106681300_106681500
ES.33746.103	chr8	+	343	1	Intergenic	novelGene_27459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	106681278	106681621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106681300_106681600
ES.33746.104	chr8	+	148	1	Intergenic	novelGene_27463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	9008	False	NA	NA	False	NA	NA	NA	106725405	106725553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106725400_106725600
ES.33746.11	chr8	+	4727	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	-66	-16	4	-1	multi-exon	FALSE	canonical	3	70	junction_18	83.7903344847198	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTTTGATGTGACT	3260	False	NA	30	True	AATAAA	-22	NA	106607516	106619856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.14	chr8	+	5006	28	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	6	-11	intron_retention	FALSE	canonical	3	8	junction_10	113.528916205585	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3262	False	NA	3	True	ATTAAA	-10	NA	106607518	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.15	chr8	+	6346	20	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	6	0	intron_retention	FALSE	canonical	3	128	junction_11	79.3762386209987	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3262	False	NA	14	True	AATAAA	-6	NA	106607518	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106615151_106615227_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617513_106617599_106617766_106617850_106618348_106618898_106619063_106619301
ES.33746.16	chr8	+	4526	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	6	-11	intron_retention	FALSE	canonical	1	6	junction_26	93.2690842940361	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3262	False	NA	3	True	ATTAAA	-10	NA	106607518	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618898_106619063_106619301
ES.33746.17	chr8	+	5065	28	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	6	0	intron_retention	FALSE	canonical	3	8	junction_10	94.71257508529	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3262	False	NA	14	True	AATAAA	-6	NA	106607518	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.21	chr8	+	6443	29	Fusion	ENSMUSG00000044287.7_ENSMUSG00000036270.17	novel	4645	29	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_27	151.244446685031	610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAAGTTGGTTCCTTTC	3266	False	NA	NA	False	ATTAAA	-14	NA	106607522	106621648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618348_106618898_106619063_106619301_106620300_106620612_106621113_106621254
ES.33746.23	chr8	+	4772	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	10	0	intron_retention	FALSE	canonical	3	8	junction_11	93.3721159705419	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3266	False	NA	14	True	AATAAA	-6	NA	106607522	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.24	chr8	+	5442	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	10	0	intron_retention	FALSE	canonical	3	8	junction_9	126.722218691353	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3266	False	NA	14	True	AATAAA	-6	NA	106607522	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.25	chr8	+	5448	26	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	-11	intron_retention	FALSE	canonical	0	0	junction_14	125.204498321746	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3267	False	NA	3	True	ATTAAA	-10	NA	106607523	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614678_106614752_106614941_106615019_106615151_106615230_106615313_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.26	chr8	+	5484	26	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	-11	intron_retention	FALSE	canonical	3	268	junction_13	55.4761209891247	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3267	False	NA	3	True	ATTAAA	-10	NA	106607523	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.27	chr8	+	4927	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	-11	intron_retention	FALSE	canonical	3	128	junction_15	72.9720806624905	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3267	False	NA	3	True	ATTAAA	-10	NA	106607523	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.28	chr8	+	4524	28	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	-9	intron_retention	FALSE	canonical	1	1	junction_3	117.243243097955	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAAGTATGTGTGTG	3267	False	NA	5	True	ATTAAA	-12	NA	106607523	106619831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612536_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.29	chr8	+	5965	24	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	0	intron_retention	FALSE	canonical	3	40	junction_10	107.43366529428	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3267	False	NA	14	True	AATAAA	-6	NA	106607523	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612868_106612950_106613056_106613381_106613492_106613585_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.3	chr8	+	4780	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_16	54.5128121057194	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.30	chr8	+	5520	26	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	11	0	intron_retention	FALSE	canonical	3	268	junction_14	55.517291000192	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3267	False	NA	14	True	AATAAA	-6	NA	106607523	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.31	chr8	+	4761	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_3	104.512034264588	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3270	False	NA	14	True	AATAAA	-6	NA	106607526	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612056_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.32	chr8	+	5038	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	14	0	intron_retention	FALSE	canonical	3	268	junction_15	54.3500567562735	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3270	False	NA	14	True	AATAAA	-6	NA	106607526	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.33	chr8	+	4715	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_10	136.799514410166	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3270	False	NA	14	True	AATAAA	-6	NA	106607526	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613924_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.34	chr8	+	4712	28	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	15	-11	intron_retention	FALSE	canonical	0	0	junction_20	95.6636913260952	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3271	False	NA	3	True	ATTAAA	-10	NA	106607527	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616859_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.36	chr8	+	5133	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	18	0	intron_retention	FALSE	canonical	3	268	junction_14	55.2233228320733	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3274	False	NA	14	True	AATAAA	-6	NA	106607530	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.37	chr8	+	5097	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	19	-11	intron_retention	FALSE	canonical	3	268	junction_14	52.1153846153846	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3275	False	NA	3	True	ATTAAA	-10	NA	106607531	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.38	chr8	+	5052	27	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	20	-11	intron_retention	FALSE	canonical	3	70	junction_16	86.0385990852035	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3276	False	NA	3	True	ATTAAA	-10	NA	106607532	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.39	chr8	+	4727	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	20	0	intron_retention	FALSE	canonical	1	6	junction_8	92.0381742007309	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3276	False	NA	14	True	AATAAA	-6	NA	106607532	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613476_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.40	chr8	+	4720	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	20	-11	intron_retention	FALSE	canonical	0	0	junction_12	115.468743009721	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3276	False	NA	3	True	ATTAAA	-10	NA	106607532	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614428_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.42	chr8	+	4447	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_17	128.411275288823	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3277	False	NA	14	True	AATAAA	-6	NA	106607533	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615390_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617627_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.44	chr8	+	5180	26	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	26	-5	intron_retention	FALSE	canonical	3	268	junction_13	55.4668333330829	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTATGTGTGTGATTT	3282	False	NA	9	True	AATAAA	-1	NA	106607538	106619835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.45	chr8	+	4978	28	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	26	0	intron_retention	FALSE	canonical	3	70	junction_17	84.8178068370843	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3282	False	NA	14	True	AATAAA	-6	NA	106607538	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.46	chr8	+	4649	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	28	-11	intron_retention	FALSE	canonical	0	0	junction_17	94.3717883627067	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3284	False	NA	3	True	ATTAAA	-10	NA	106607540	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615313_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.47	chr8	+	3312	23	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	97.8168405619434	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3284	False	NA	14	True	AATAAA	-6	NA	106607540	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617013_106619678
ES.33746.49	chr8	+	4751	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_17	126.6458383341	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3284	False	NA	14	True	AATAAA	-6	NA	106607540	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615390_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617061_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.5	chr8	+	4252	26	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	2	-11	intron_retention	FALSE	canonical	0	0	junction_22	126.997360602494	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3258	False	NA	3	True	ATTAAA	-10	NA	106607514	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617061_106617927_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.50	chr8	+	5485	26	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	-11	intron_retention	FALSE	canonical	3	8	junction_9	98.0521983435354	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3285	False	NA	3	True	ATTAAA	-10	NA	106607541	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.52	chr8	+	5921	21	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	-11	intron_retention	FALSE	canonical	3	128	junction_10	78.0974391385531	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3285	False	NA	3	True	ATTAAA	-10	NA	106607541	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106614036_106614137_106614319_106614413_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.53	chr8	+	4816	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	0	intron_retention	FALSE	canonical	3	128	junction_15	72.4354118431647	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3285	False	NA	14	True	AATAAA	-6	NA	106607541	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.54	chr8	+	4589	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	29	0	intron_retention	FALSE	non_canonical	0	0	junction_25	129.620693697781	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3285	False	NA	14	True	AATAAA	-6	NA	106607541	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617743_106617927_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.55	chr8	+	5245	23	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	29	-11	intron_retention	FALSE	canonical	0	0	junction_18	122.81498549101	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3285	False	NA	3	True	ATTAAA	-10	NA	106607541	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.56	chr8	+	4929	26	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	29	-11	intron_retention	FALSE	canonical	0	0	junction_12	126.934843128276	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3285	False	NA	3	True	ATTAAA	-10	NA	106607541	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614415_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.58	chr8	+	4928	28	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	29	0	intron_retention	FALSE	canonical	3	70	junction_18	95.5529715412889	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3285	False	NA	14	True	AATAAA	-6	NA	106607541	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898
ES.33746.6	chr8	+	4597	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_27	94.3495529106033	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3258	False	NA	14	True	AATAAA	-6	NA	106607514	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106619301
ES.33746.60	chr8	+	5092	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_19	96.9253967976335	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGTGTGATTTTA	3285	False	NA	11	True	AATAAA	-3	NA	106607541	106619837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616878_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.61	chr8	+	4638	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	-5	intron_retention	FALSE	canonical	0	0	junction_21	118.799066125306	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGTCTTTGATGT	3285	False	NA	26	True	AATAAA	-18	NA	106607541	106619852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616859_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106619018_106619063_106619301
ES.33746.62	chr8	+	4973	28	ISM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	29	17	29	0	intron_retention	FALSE	canonical	3	268	junction_16	53.724593638214	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3285	False	NA	14	True	AATAAA	-6	NA	106607541	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898
ES.33746.63	chr8	+	4839	31	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	29	108520	intron_retention	FALSE	non_canonical	0	0	junction_29	116.518768159183	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCATGTTGGAGAGGT	3285	False	NA	NA	False	NA	NA	NA	106607541	106730060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301_106619841_106649586_106649659_106730027
ES.33746.64	chr8	+	5090	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	30	-11	intron_retention	FALSE	canonical	3	268	junction_14	54.4087233042426	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3286	False	NA	3	True	ATTAAA	-10	NA	106607542	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.65	chr8	+	5842	22	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	33	-2	intron_retention	FALSE	canonical	3	128	junction_11	76.3990894034608	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTCTTTGATGTGAC	3289	False	NA	29	True	AATAAA	-21	NA	106607545	106619855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617766_106617850_106618348_106618898_106619063_106619301
ES.33746.67	chr8	+	4695	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-31	0	intron_retention	FALSE	canonical	3	8	junction_11	111.661592432178	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3295	False	NA	14	True	AATAAA	-6	NA	106607551	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614118_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.7	chr8	+	4775	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_17	119.365435293711	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3258	False	NA	14	True	AATAAA	-6	NA	106607514	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615390_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616859_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.70	chr8	+	4767	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-22	-11	intron_retention	FALSE	canonical	0	0	junction_3	123.383853299782	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3304	False	NA	3	True	ATTAAA	-10	NA	106607560	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612008_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.71	chr8	+	4690	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-22	-3	intron_retention	FALSE	canonical	0	0	junction_17	94.3717883627067	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGTCTTTGATGTGA	3304	False	NA	28	True	AATAAA	-20	NA	106607560	106619854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615774_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.73	chr8	+	4613	29	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-20	0	intron_retention	FALSE	non_canonical	0	0	junction_25	94.4655481957225	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3306	False	NA	14	True	AATAAA	-6	NA	106607562	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617743_106617927_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.75	chr8	+	5710	25	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-19	-11	intron_retention	FALSE	canonical	3	268	junction_14	54.1948484380409	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3307	False	NA	3	True	ATTAAA	-10	NA	106607563	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106619063_106619301
ES.33746.76	chr8	+	4596	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-19	-11	intron_retention	FALSE	canonical	0	0	junction_18	95.7746125339887	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3307	False	NA	3	True	ATTAAA	-10	NA	106607563	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.77	chr8	+	4613	29	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-19	-31	intron_retention	FALSE	non_canonical	0	0	junction_25	120.685224735208	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATTAAAGGCTTTTGG	3307	False	NA	-17	True	AAAACA	-8	NA	106607563	106619809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617751_106617858_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.78	chr8	+	5380	26	NNC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-19	-11	intron_retention	FALSE	canonical	1	6	junction_6	116.255140101417	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3307	False	NA	3	True	ATTAAA	-10	NA	106607563	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613476_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.81	chr8	+	4709	29	NIC	ENSMUSG00000036270.17	novel	4645	29	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_18	104.439484235355	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3307	False	NA	14	True	AATAAA	-6	NA	106607563	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616262_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.82	chr8	+	5114	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_19	107.394430067241	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3308	False	NA	14	True	AATAAA	-6	NA	106607564	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616859_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.85	chr8	+	5370	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-10	0	intron_retention	FALSE	canonical	3	128	junction_14	73.5629988030627	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3316	False	NA	14	True	AATAAA	-6	NA	106607572	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.87	chr8	+	4488	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-2470	-2	intron_retention	FALSE	canonical	3	128	junction_15	71.0207952698938	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTGTGATTTTAG	6874	False	NA	12	True	AATAAA	-4	NA	106611130	106619838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.88	chr8	+	4462	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-2357	-11	intron_retention	FALSE	canonical	3	268	junction_14	53.9934249777545	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	6987	False	NA	3	True	ATTAAA	-10	NA	106611243	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.89	chr8	+	6050	23	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-2228	0	intron_retention	FALSE	canonical	3	128	junction_13	74.9390523708963	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	7116	False	NA	14	True	AATAAA	-6	NA	106611372	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127
ES.33746.9	chr8	+	4864	28	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	2	-11	intron_retention	FALSE	canonical	0	0	junction_3	105.538335177526	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	3258	False	NA	3	True	ATTAAA	-10	NA	106607514	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612058_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.90	chr8	+	4612	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-2227	0	intron_retention	FALSE	non_canonical	0	0	junction_20	95.1816155611387	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	7117	False	NA	14	True	AATAAA	-6	NA	106611373	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617160_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.91	chr8	+	4397	26	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-1936	-11	intron_retention	FALSE	canonical	3	325	junction_12	46.65745813908	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	7408	False	NA	3	True	ATTAAA	-10	NA	106611664	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.92	chr8	+	4313	27	NNC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-1892	-3	intron_retention	FALSE	canonical	0	0	junction_1	95.9207096740777	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGTGTGATTTTA	7452	False	NA	11	True	AATAAA	-3	NA	106611708	106619837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106611777_106612033_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.93	chr8	+	3801	23	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-651	-1	intron_retention	FALSE	canonical	3	40	junction_8	108.352119583245	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTTTGATGTGACT	8693	False	NA	30	True	AATAAA	-22	NA	106612949	106619856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.94	chr8	+	3691	21	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	-157	0	intron_retention	FALSE	canonical	3	268	junction_8	59.1420958370601	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	9187	False	NA	14	True	AATAAA	-6	NA	106613443	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106613492_106613585_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.95	chr8	+	3565	21	ISM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	6071	17	-17	0	3prime_fragment	FALSE	canonical	3	268	junction_8	56.5697799182567	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	9327	False	NA	14	True	AATAAA	-6	NA	106613583	106619840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.96	chr8	+	3134	8	ISM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	8528	1	-859	-1	intron_retention	FALSE	canonical	3	354	junction_1	47.0757097554524	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTTTGATGTGACT	NA	False	NA	30	True	AATAAA	-22	NA	106616040	106619856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599
ES.33746.97	chr8	+	1183	4	ISM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	10184	11	867	-11	3prime_fragment	FALSE	canonical	3	452	junction_2	17.9876500843094	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	NA	False	NA	3	True	ATTAAA	-10	NA	106617766	106619829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106618038_106618127_106618348_106618898_106619063_106619301
ES.33746.98	chr8	+	3348	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	-61	-32	-61	32	multi-exon	FALSE	canonical	3	44	junction_1	10	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCCATGGGACTAGTG	NA	False	NA	19	True	NA	NA	NA	106627011	106658442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106627173_106639251_106640279_106656282
ES.33746.99	chr8	+	6288	3	FSM	ENSMUSG00000087436.2_ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	11	-3044	11	3044	multi-exon	FALSE	canonical	3	44	junction_1	10	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106627083	106661454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106627173_106639251_106640279_106656282
ES.33747.1	chr8	-	181	1	Intergenic	novelGene_27450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	106629567	106629386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106629400_106629600
ES.33748.1	chr8	-	179	1	Intergenic	novelGene_27452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAATAAATAAATAAG	NA	False	NA	NA	False	NA	NA	NA	106637529	106637350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106637400_106637500
ES.33749.1	chr8	-	339	1	Intergenic	novelGene_27453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106641042	106640703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106640700_106641000
ES.33749.2	chr8	-	229	1	Intergenic	novelGene_27454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTTAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	106641042	106640813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106640800_106641000
ES.3375.1	chr10	-	177	1	Intergenic	novelGene_2604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	6556	False	NA	NA	False	NA	NA	NA	81008363	81008186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81008200_81008400
ES.33750.1	chr8	-	357	1	Intergenic	novelGene_27455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106643090	106642733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106642700_106643100
ES.33750.2	chr8	-	245	1	Intergenic	novelGene_27456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTGAGGAGGC	NA	False	NA	NA	False	AAAAAG	-44	NA	106643089	106642844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106642800_106643100
ES.33751.3	chr8	-	950	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	362	-1	10	1	multi-exon	FALSE	canonical	1	3	junction_7	110.839468399582	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAACAGAAGGCTGTGT	NA	False	NA	-10	True	AATAAA	-17	NA	106664714	106662369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
ES.33752.1	chr8	-	6568	24	Fusion	ENSMUSG00000017765.18_ENSMUSG00000035237.8	novel	3755	24	NA	NA	-1	0	intron_retention	TRUE	canonical	1	2	junction_1	49.2887023715829	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGGGTGTTTGTTATGG	NA	False	NA	NA	False	AATAAA	-21	NA	106692677	106666182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_106666773_106668270_106668496_106668577_106670806_106670906_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.11	chr8	-	3847	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	-34	-2	-34	-1	multi-exon	FALSE	canonical	2	4	junction_23	38.1304595706627	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	-2	True	AATAAA	-20	NA	106692763	106670222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
ES.33752.12	chr8	-	3748	24	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	38.4235179242953	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	-2	True	AATAAA	-20	NA	106692694	106670222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686098_106687307_106687403_106692556
ES.33752.13	chr8	-	3704	24	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.920451080214	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692698	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674174_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.14	chr8	-	4072	22	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-51	1	intron_retention	FALSE	canonical	3	126	junction_13	19.0402366646242	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692780	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.17	chr8	-	3761	24	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	38.566320262648	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692701	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674228_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.18	chr8	-	3963	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-58	1	intron_retention	FALSE	canonical	3	126	junction_15	19.6489858422286	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692787	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.19	chr8	-	4058	23	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	11	1	intron_retention	FALSE	canonical	1	1	junction_15	39.1813963276172	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692695	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677665_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.2	chr8	-	3176	4	ISM	ENSMUSG00000017765.18_ENSMUSG00000035237.8	ENSMUST00000038896.8	1342	6	-1026	6	-1026	-6	intron_retention	FALSE	canonical	1	2	junction_1	0	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTGCAGGGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	106671040	106666188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106666773_106668270_106668496_106668577_106668674_106668769
ES.33752.21	chr8	-	3955	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-35	1	intron_retention	FALSE	canonical	3	126	junction_14	19.6526132260209	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTGCTCCGGCTCT	NA	False	NA	-3	True	AATAAA	-19	NA	106692764	106670223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.22	chr8	-	5052	22	NNC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_21	52.6546098315042	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106691079	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673794_106674124_106674228_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106691025
ES.33752.23	chr8	-	6504	19	NIC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	-8	0	intron_retention	FALSE	canonical	3	132	junction_12	16.7270203526074	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692737	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106687403_106692556
ES.33752.25	chr8	-	3682	23	NIC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	38.8450247832747	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692701	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106692556
ES.33752.26	chr8	-	3790	24	NNC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	50.0598507573184	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692738	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678248_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686119_106687307_106687403_106692556
ES.33752.27	chr8	-	5002	23	NNC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_21	50.5851912148994	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692727	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682130_106682212_106682360_106685989_106686119_106687307_106687403_106692556
ES.33752.28	chr8	-	3509	22	NIC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	40.584560807821	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692727	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.29	chr8	-	5099	22	NIC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	6	0	intron_retention	FALSE	canonical	3	126	junction_13	19.450734324432	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692723	106670224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.3	chr8	-	3532	2	NIC	ENSMUSG00000035237.8	novel	1342	6	NA	NA	210	-8	intron_retention	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAAGTGCAGGGTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	106669804	106666190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106668496_106668577
ES.33752.31	chr8	-	4537	22	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	8	-1	intron_retention	FALSE	canonical	3	126	junction_13	20.0364746764574	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGCTGCTCCGGCT	NA	False	NA	-5	True	AATAAA	-17	NA	106692698	106670225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.32	chr8	-	3573	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	39.7948509896602	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGCTGCTCCGGCT	NA	False	NA	-5	True	AATAAA	-17	NA	106692694	106670225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.33	chr8	-	3914	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	126	junction_14	18.7323470618682	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCCTGCTGCTCCGGCT	NA	False	NA	-5	True	AATAAA	-17	NA	106692738	106670225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.34	chr8	-	5443	20	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	126	junction_11	19.1691696145637	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTCCTGCTGCTCCGGC	NA	False	NA	-6	True	AATAAA	-16	NA	106692716	106670226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.35	chr8	-	3734	23	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	39.5768945031365	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTCCTGCTGCTCCGGC	NA	False	NA	-6	True	AATAAA	-16	NA	106692722	106670226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106677140_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.36	chr8	-	5192	21	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	2	-3	intron_retention	FALSE	canonical	3	132	junction_13	17.572421574729	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCCTGCTGCTCCGG	NA	False	NA	-7	True	AATAAA	-15	NA	106692727	106670227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.37	chr8	-	5218	22	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	10	-3	intron_retention	FALSE	canonical	3	126	junction_13	19.450734324432	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCCTGCTGCTCCGG	NA	False	NA	-7	True	AATAAA	-15	NA	106692719	106670227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.38	chr8	-	3811	22	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_12	52.5095391398579	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCCTGCTGCTCCGG	NA	False	NA	-7	True	AATAAA	-15	NA	106692698	106670227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106677140_106677236_106677327_106677493_106678065_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.4	chr8	-	4993	23	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	5	4	intron_retention	FALSE	canonical	3	126	junction_14	19.1968919660716	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCCGGCTCTTTTTTC	NA	False	NA	3	True	AATAAA	-25	NA	106692724	106670217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.40	chr8	-	3886	23	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	11	-5	intron_retention	FALSE	canonical	2	2	junction_9	39.4190508542245	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCCTCCTGCTGCTCC	NA	False	NA	-9	True	AATAAA	-13	NA	106692718	106670229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106673794_106674124_106674228_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.42	chr8	-	3623	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-62	194	-9	-191	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTATTGTTTGGATGTC	NA	False	NA	NA	False	NA	NA	NA	106692738	106670415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.43	chr8	-	4860	22	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	8	-192	intron_retention	FALSE	canonical	3	132	junction_14	17.4478165927681	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTATTGTTTGGATGT	NA	False	NA	NA	False	NA	NA	NA	106692698	106670416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106675889_106676285_106676461_106676828_106676887_106677136_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.44	chr8	-	5593	1	NIC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	6360	1415	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGGAAGGGTGGG	NA	False	NA	NA	False	NA	NA	NA	106684692	106679099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106679100_106684700
ES.33752.6	chr8	-	3871	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	-116	0	-63	0	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	106692792	106670221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.8	chr8	-	5844	20	NNC	ENSMUSG00000017765.18	novel	3755	24	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_12	41.8896452870094	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	106692722	106670221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672673_106673322_106673492_106673688_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677665_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33752.9	chr8	-	5932	20	NIC	ENSMUSG00000017765.18	novel	3811	24	NA	NA	0	-1	intron_retention	FALSE	canonical	3	126	junction_11	20.2442153428491	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCTGCTCCGGCTCTT	NA	False	NA	-2	True	AATAAA	-20	NA	106692729	106670222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106675889_106676285_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ES.33753.1	chr8	-	156	1	Intergenic	novelGene_27460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTACTCTTAACCA	NA	False	NA	NA	False	NA	NA	NA	106696192	106696036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106696000_106696200
ES.33754.1	chr8	-	176	1	Intergenic	novelGene_27461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106697774	106697598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106697600_106697800
ES.33755.1	chr8	-	1701	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	-10	7	-10	-7	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCAAGTGTCTGAGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	106706071	106700151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
ES.33755.2	chr8	-	1814	10	NNC	ENSMUSG00000031898.10	novel	1698	10	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	15.663120165961	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCAAGTGTCTGAGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	106706097	106700151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705558_106705645
ES.33756.1	chr8	-	2287	9	NIC	ENSMUSG00000053687.16	novel	1702	11	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_3	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGATGTGAGTGTCCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	106718379	106711579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106711914_106712025_106712162_106712812_106712889_106714715_106715488_106715583_106715654_106715873_106716231_106716523_106716651_106717227_106717543_106718279
ES.33757.1	chr8	-	156	1	Intergenic	novelGene_27462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	106724777	106724621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106724600_106724800
ES.33758.1	chr8	+	2162	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	-281	-21	-281	0	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGACATAATTTTTC	NA	False	NA	33	True	AATAAA	-33	NA	106737857	106780472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.10	chr8	+	273	1	Intergenic	novelGene_27464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTCTGTACT	NA	False	NA	NA	False	NA	NA	NA	106739094	106739367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106739100_106739400
ES.33758.11	chr8	+	154	1	Intergenic	novelGene_27465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	106739095	106739249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106739100_106739200
ES.33758.12	chr8	+	1902	1	Intergenic	novelGene_27467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCTGTTAGTCATGTG	NA	False	NA	NA	False	NA	NA	NA	106766050	106767952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106766000_106768000
ES.33758.13	chr8	+	2606	5	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	35502	0	-1699	0	3prime_fragment	FALSE	canonical	3	192	junction_1	20.1308221391974	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	4193	False	NA	12	True	AATAAA	-12	NA	106773640	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.14	chr8	+	1278	4	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	38372	0	1171	0	3prime_fragment	FALSE	canonical	3	203	junction_1	17.1723291631883	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	7063	False	NA	12	True	AATAAA	-12	NA	106776510	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.2	chr8	+	1962	17	NNC	ENSMUSG00000031901.13	novel	1860	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	66.1890049403978	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	NA	False	NA	12	True	AATAAA	-12	NA	106738121	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106738211_106742455_106742598_106742843_106742929_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.3	chr8	+	1768	14	NIC	ENSMUSG00000031901.13	novel	1860	16	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	57.4436693459688	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	NA	False	NA	12	True	AATAAA	-12	NA	106738125	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.4	chr8	+	1881	16	NNC	ENSMUSG00000031901.13	novel	1860	16	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	82.491211653121	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCACCTGCTTCAAC	NA	False	NA	10	True	AATAAA	-10	NA	106738135	106780449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758303_106758372_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768725_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.5	chr8	+	3110	14	NIC	ENSMUSG00000031901.13	novel	1860	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	148	junction_8	22.6702630863068	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	NA	False	NA	12	True	AATAAA	-12	NA	106738140	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106779712_106779923
ES.33758.6	chr8	+	3132	13	ISM	ENSMUSG00000031901.13	ENSMUST00000119736.8	1837	15	12	21	-3	0	intron_retention	TRUE	canonical	3	13	junction_4	52.3616563484727	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	NA	False	NA	12	True	AATAAA	-12	NA	106738150	106780451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433
ES.33758.8	chr8	+	5085	14	NIC	ENSMUSG00000031901.13	novel	1837	15	NA	NA	1	6	intron_retention	FALSE	canonical	3	148	junction_7	22.8613003404102	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTTCAACCTTACATC	NA	False	NA	18	True	AATAAA	-18	NA	106738154	106780457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33758.9	chr8	+	1695	14	NIC	ENSMUSG00000031901.13	novel	1837	15	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	57.3861620744334	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCACCTGCTTCAAC	NA	False	NA	10	True	AATAAA	-10	NA	106738165	106780449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106738211_106742455_106742598_106752537_106752584_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ES.33759.1	chr8	-	1831	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	435	-4	435	4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATGATTTCTTTTTCT	NA	False	NA	-5	True	AATAAA	-21	NA	106738079	106736248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106736200_106738100
ES.3376.1	chr10	-	2181	2	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGGGCTGGAGAGAT	7202	False	NA	NA	False	NA	NA	NA	81026521	81024164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81025304_81025479
ES.3376.2	chr10	-	2347	1	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7181	False	NA	NA	False	NA	NA	NA	81026542	81024195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81024200_81026500
ES.3376.3	chr10	-	1153	2	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTGACATAAAAATGGT	7181	False	NA	NA	False	NA	NA	NA	81026542	81025307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81026132_81026213
ES.3376.4	chr10	-	3248	1	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTGACATAAAAATGGT	8764	False	NA	NA	False	NA	NA	NA	81028555	81025307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81025300_81028600
ES.3376.5	chr10	-	1031	3	Antisense	novelGene_ENSMUSG00000034974.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	7183	False	NA	NA	False	NA	NA	NA	81026540	81025341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81026132_81026213_81026344_81026429
ES.33760.1	chr8	-	175	1	Intergenic	novelGene_27466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTTTTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	106757696	106757521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106757500_106757700
ES.33761.1	chr8	+	5687	10	NNC	ENSMUSG00000031902.11	novel	1925	4	NA	NA	-4019	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.8299999215649	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAATCTGAGTTTTTCTC	NA	False	NA	12	True	AATAAA	-23	NA	106781452	106857172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106781514_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.10	chr8	+	5276	9	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-49	-701	combination_of_known_splicesites	FALSE	canonical	2	15	junction_6	69.6235412773582	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGCTATGCACCAAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	106786215	106856468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106830656_106830784_106834756_106835762_106854549
ES.33761.11	chr8	+	5778	11	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.6517553356895	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786215	106857169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786242_106786496_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.12	chr8	+	4774	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-44	1254	-44	840	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATATTGTACTTTAATT	NA	False	NA	NA	False	TTTAAA	-30	NA	106786220	106855915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.13	chr8	+	5048	10	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-42	-7079	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	63.2824356884805	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAGAAAAAAAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	106786222	106847595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953
ES.33761.15	chr8	+	5927	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-40	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	69.9650706503689	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTCCTTGAAATCTG	NA	False	NA	2	True	AATAAA	-13	NA	106786224	106857162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818753_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.16	chr8	+	5968	9	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_6	69.6235412773582	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786224	106857169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106830656_106830784_106834756_106835762_106854549
ES.33761.17	chr8	+	1722	2	ISM	ENSMUSG00000031902.11	ENSMUST00000212577.2	2207	4	-36	12648	-36	-12648	5prime_fragment	FALSE	canonical	3	212	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAACTTAGAAGTACT	NA	False	NA	NA	False	AATAAA	-10	NA	106786228	106806560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106786626_106805235
ES.33761.18	chr8	+	4877	9	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.2192628254226	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTGAAATCTGAGTT	NA	False	NA	6	True	AATAAA	-17	NA	106786230	106857166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.19	chr8	+	5660	8	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-32	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	76.3707391342939	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGTTTTTCTCCACC	NA	False	NA	16	True	AATAAA	-27	NA	106786232	106857176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.2	chr8	+	6522	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-529	-9	264	9	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTTTTTCTCCACCTG	NA	False	NA	18	True	AATAAA	-29	NA	106785735	106857178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.20	chr8	+	5865	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	71.1364538174936	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCCTTGAAATCTGAGT	NA	False	NA	5	True	AATAAA	-16	NA	106786232	106857165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806275_106810490_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.21	chr8	+	4044	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-32	18	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAGATGCAGACAAAAAAAA	NA	False	NA	NA	False	GATAAA	-14	NA	106786232	106855093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.22	chr8	+	5639	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-32	-481	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTGGACTATGCAAGT	NA	False	NA	24	True	GATAAA	-40	NA	106786232	106856688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.23	chr8	+	6027	11	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.7176857825401	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTGAAATCTGAGTT	NA	False	NA	6	True	AATAAA	-17	NA	106786235	106857166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786539_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.24	chr8	+	4874	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-21	859	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCAGGAAGCAAATTGA	NA	False	NA	NA	False	AATGAA	-16	NA	106786243	106855934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.25	chr8	+	5491	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-20	-490	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	70.217299405506	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCACACATCATTGGAC	NA	False	NA	15	True	GATAAA	-31	NA	106786244	106856679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810465_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.26	chr8	+	3166	4	FSM	ENSMUSG00000031902.11	ENSMUST00000212577.2	2207	4	-20	-939	-20	939	multi-exon	FALSE	canonical	3	212	junction_1	3.77123616632825	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTATTAGATATTTT	NA	False	NA	NA	False	NA	NA	NA	106786244	106820147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663
ES.33761.27	chr8	+	5446	9	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-20	-502	combination_of_known_splicesites	FALSE	canonical	2	15	junction_6	69.6235412773582	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTGGTGGTAAAGCAC	NA	False	NA	3	True	GATAAA	-19	NA	106786244	106856667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106830656_106830784_106834756_106835762_106854549
ES.33761.28	chr8	+	3748	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-20	2256	-20	-162	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGATGGGTGCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	106786244	106854913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.29	chr8	+	5415	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-20	-499	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	69.9650706503689	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGTGGTAAAGCACACA	NA	False	NA	6	True	GATAAA	-22	NA	106786244	106856670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818753_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.3	chr8	+	5638	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-125	471	-125	-471	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCAAGTTGATTTCTAG	NA	False	NA	34	True	NA	NA	NA	106786139	106856698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.30	chr8	+	5992	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.6229634387142	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTTGAAATCTGAGTT	NA	False	NA	6	True	AATAAA	-17	NA	106786244	106857166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818855_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.31	chr8	+	5604	11	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-13	-503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.5524427360862	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTGGTGGTAAAGCA	NA	False	NA	2	True	GATAAA	-18	NA	106786251	106856666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106799067_106799178_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.32	chr8	+	5270	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-12	-703	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	70.217299405506	406	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTGCTATGCACCAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	106786252	106856466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810465_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.34	chr8	+	5143	1	Intergenic	novelGene_27468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106790893	106796036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106790900_106796000
ES.33761.35	chr8	+	3099	9	ISM	ENSMUSG00000031902.11	ENSMUST00000212742.2	3207	10	20193	-400	-16142	-1	3prime_fragment	FALSE	canonical	3	195	junction_7	16.6864465959652	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAAAAAAAAACCTTC	NA	False	NA	NA	False	AATAGA	-8	NA	106805664	106855074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.36	chr8	+	4119	6	ISM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	36529	5	987	-5	3prime_fragment	FALSE	canonical	3	195	junction_4	14.1901374200534	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCCTTGAAATCTGAG	NA	False	NA	4	True	AATAAA	-15	NA	106822793	106857164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.37	chr8	+	155	1	Intergenic	novelGene_27471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAAATAAGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	106831098	106831253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106831100_106831300
ES.33761.38	chr8	+	184	1	Intergenic	novelGene_27472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGATGCTTAT	NA	False	NA	NA	False	NA	NA	NA	106839432	106839616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106839400_106839600
ES.33761.39	chr8	+	221	1	Intergenic	novelGene_27473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTGAGCCACCATGCA	NA	False	NA	NA	False	NA	NA	NA	106842042	106842263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106842000_106842300
ES.33761.4	chr8	+	3918	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-82	-158	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGTGCTTTGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	106786182	106854917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.40	chr8	+	4912	1	NIC	ENSMUSG00000031902.11	novel	3712	11	NA	NA	17299	-7067	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAGGAACTAGAAATA	NA	False	NA	NA	False	NA	NA	NA	106842695	106847607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106842700_106847600
ES.33761.41	chr8	+	4230	1	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	27541	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTTGAAATCTGAGTTT	NA	False	NA	7	True	AATAAA	-18	NA	106852937	106857167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106852900_106857200
ES.33761.5	chr8	+	5375	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-75	684	-75	-684	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGCCTTTTAAATAC	NA	False	NA	NA	False	AATAAA	-34	NA	106786189	106856485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.6	chr8	+	6166	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-72	6	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGAGTTTTTCTCCAC	NA	False	NA	15	True	AATAAA	-26	NA	106786192	106857175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
ES.33761.7	chr8	+	4112	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	-55	1927	-55	167	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCATTCCATCATTG	NA	False	NA	NA	False	AATAAA	-16	NA	106786209	106855242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33761.8	chr8	+	6041	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-52	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	71.3044247410658	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTCCTTGAAATCTG	NA	False	NA	2	True	AATAAA	-13	NA	106786212	106857162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830793_106834753_106835762_106854549
ES.33761.9	chr8	+	6013	10	NNC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	70.217299405506	409	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786212	106857169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106786626_106805235_106806374_106810465_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ES.33762.1	chr8	+	1496	4	FSM	ENSMUSG00000086390.8	ENSMUST00000137995.8	948	4	70	-618	35	193	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTCTTTGGTATTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	106862101	106865350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106862365_106863162_106863321_106863798_106863983_106864459
ES.33762.2	chr8	+	2759	1	Genic_Genomic	ENSMUSG00000086390.8	novel	NA	NA	NA	NA	527	195	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTTTGGTATTTTGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	106862593	106865352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_106862600_106865400
ES.33762.3	chr8	+	4708	1	Genic_Genomic	ENSMUSG00000086390.8	novel	NA	NA	NA	NA	19	3266	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAAGAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	106863715	106868423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_106863700_106868400
ES.33763.1	chr8	+	2770	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	-64	0	-64	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6133	False	NA	14	True	AATAAA	-20	NA	106876966	106891347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
ES.33763.2	chr8	+	2568	6	FSM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	10	0	10	0	multi-exon	FALSE	canonical	1	1	junction_4	47.4088599314516	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGCCTTGTCCTGCTC	6207	False	NA	11	True	AATAAA	-17	NA	106877040	106891344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887840_106887941_106889456
ES.33763.3	chr8	+	6076	4	ISM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	5897	-3	-2207	0	3prime_fragment	FALSE	canonical	1	1	junction_2	56.8409085860605	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	NA	False	NA	14	True	AATAAA	-20	NA	106882927	106891347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106886914_106887212_106887312_106887840_106887941_106889456
ES.33764.1	chr8	+	1804	10	NNC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	-301	-756	intron_retention	FALSE	canonical	1	10	junction_1	155.484189978703	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGGCCAATGCTCTCT	1531	False	NA	16	True	ATTAAA	-31	NA	106895187	106923383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106895295_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.10	chr8	+	5522	10	NNC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	9	1776	intron_retention	FALSE	canonical	0	0	junction_7	146.322913659237	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTTCCTTGGTACC	1870	False	NA	NA	False	ATTAAA	-16	NA	106895526	106927114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921184_106921993_106922144_106922484_106922669_106923175
ES.33764.11	chr8	+	2462	9	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	9	170	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	163.001485806112	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAAGAGGCCTGGAAT	1870	False	NA	5	True	AATAAA	-20	NA	106895526	106924647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895587_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.12	chr8	+	3749	11	NIC	ENSMUSG00000031904.6	novel	2672	11	NA	NA	17	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	160.354014605185	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTTGCCATTGGTT	1878	False	NA	2	True	AATAAA	-16	NA	106895534	106925336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895833_106905733_106905920_106906118_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.13	chr8	+	3185	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	27	170	intron_retention	FALSE	canonical	3	12	junction_1	155.192671966491	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAAGAGGCCTGGAAT	1888	False	NA	5	True	AATAAA	-20	NA	106895544	106924647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895769_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.14	chr8	+	2951	10	NNC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	36	176	intron_retention	FALSE	canonical	2	3	junction_4	147.128146042913	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCTGGAATGTTCTA	1897	False	NA	11	True	AATAAA	-26	NA	106895553	106924653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919067_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.15	chr8	+	1935	10	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	64	-769	intron_retention	FALSE	canonical	2	6	junction_1	156.073186377971	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAAGGGGGCTCAGG	1925	False	NA	3	True	ATTAAA	-18	NA	106895581	106923370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895833_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.16	chr8	+	3732	10	NIC	ENSMUSG00000031904.6	novel	766	4	NA	NA	17	2	intron_retention	FALSE	canonical	2	6	junction_1	156.073186377971	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGCCATTGGTTCTGG	2098	False	NA	6	True	AATAAA	-20	NA	106895754	106925340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895833_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.17	chr8	+	2563	7	ISM	ENSMUSG00000031904.6	ENSMUST00000212377.2	2672	11	23173	-166	13697	166	3prime_fragment	FALSE	canonical	3	50	junction_4	156.740408177201	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACTGCAAGAGGCCTG	1049	False	NA	1	True	AATAAA	-16	NA	106918679	106924643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.2	chr8	+	3128	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	-61	683	-61	178	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCTGGAATGTTCTACA	1771	False	NA	13	True	AATAAA	-28	NA	106895427	106924655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.3	chr8	+	1786	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	9	1955	9	-756	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGGCCAATGCTCTCT	1841	False	NA	16	True	ATTAAA	-31	NA	106895497	106923383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.4	chr8	+	2818	11	NNC	ENSMUSG00000031904.6	novel	2672	11	NA	NA	3	170	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	160.120860602234	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAAGAGGCCTGGAAT	1853	False	NA	5	True	AATAAA	-20	NA	106895509	106924647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106895566_106905733_106905920_106906118_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.5	chr8	+	3738	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	21	-9	3	9	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGGTTCTGGACATGCA	1853	False	NA	13	True	AATAAA	-27	NA	106895509	106925347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.6	chr8	+	5081	10	NNC	ENSMUSG00000031904.6	novel	2672	11	NA	NA	-5	1777	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	152.411318072324	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTTCCTTGGTACCA	1856	False	NA	NA	False	ATTAAA	-17	NA	106895512	106927115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106895587_106905733_106905920_106916248_106916375_106918970_106919067_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.7	chr8	+	2433	9	FSM	ENSMUSG00000031904.6	ENSMUST00000213020.2	3200	9	11	756	0	-756	multi-exon	FALSE	canonical	3	50	junction_6	138.341911129636	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGGCCAATGCTCTCT	1861	False	NA	16	True	ATTAAA	-31	NA	106895517	106923383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.8	chr8	+	5497	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	29	-1776	0	1776	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTTCCTTGGTACC	1861	False	NA	NA	False	ATTAAA	-16	NA	106895517	106927114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33764.9	chr8	+	1192	9	NIC	ENSMUSG00000031904.6	novel	3750	10	NA	NA	8	-763	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	163.001485806112	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGGGCTCAGGGCCAAT	1869	False	NA	9	True	ATTAAA	-24	NA	106895525	106923376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106895587_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ES.33765.1	chr8	+	177	1	Intergenic	novelGene_27479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGAGCTGGGCTGACCG	NA	False	NA	NA	False	NA	NA	NA	106935366	106935543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_106935400_106935500
ES.33766.1	chr8	+	2328	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	63	1081	-24	-1081	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGGCCGAGGAACTT	1882	False	NA	45	True	NA	NA	NA	106937630	106978345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.10	chr8	+	2409	18	NNC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	1	-1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	356.24508495365	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCTTGTGGCTCAAT	1907	False	NA	22	True	AATAAA	-23	NA	106937655	106978322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967692_106967946_106968742_106968883_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.11	chr8	+	1851	15	NNC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	1	-1104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	286.209900497619	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCTTGTGGCTCAAT	1907	False	NA	22	True	AATAAA	-23	NA	106937655	106978322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970470_106977029_106977101_106977828_106977926_106978110
ES.33766.12	chr8	+	2185	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	1	-1102	combination_of_known_splicesites	FALSE	canonical	3	37	junction_16	255.302516634678	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	1907	False	NA	24	True	AATAAA	-25	NA	106937655	106978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106978110
ES.33766.14	chr8	+	2188	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	3	-1110	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	271.085657299958	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTGAATGGCTTGTGG	1909	False	NA	16	True	AATAAA	-17	NA	106937657	106978316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.18	chr8	+	3209	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	91	172	4	-172	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCGACTTTTTTTTTAAA	1910	False	NA	NA	False	CATAAA	-16	NA	106937658	106979254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.19	chr8	+	3325	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	4	-1104	intron_retention	FALSE	canonical	3	978	junction_12	69.3874707259891	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCTTGTGGCTCAAT	1910	False	NA	22	True	AATAAA	-23	NA	106937658	106978322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.2	chr8	+	2472	17	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	83	1102	-4	-1102	intron_retention	FALSE	canonical	3	978	junction_13	60.4109623743903	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	1902	False	NA	24	True	AATAAA	-25	NA	106937650	106978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828
ES.33766.20	chr8	+	3395	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	92	-15	5	15	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGTATTTCTAAATCT	1911	False	NA	NA	False	ATTAAA	-22	NA	106937659	106979441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.22	chr8	+	3513	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	92	-133	5	133	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGCTAGTACACTTCGC	1911	False	NA	NA	False	AATAAA	-20	NA	106937659	106979559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.23	chr8	+	3082	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	6	-1104	intron_retention	FALSE	canonical	3	978	junction_12	66.9374708216556	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCTTGTGGCTCAAT	1912	False	NA	22	True	AATAAA	-23	NA	106937660	106978322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.25	chr8	+	2251	18	NNC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	263.195047859934	647	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTGAATGGCTTGTGG	1920	False	NA	16	True	AATAAA	-17	NA	106937668	106978316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953942_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.26	chr8	+	2479	1	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	10	-13744	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAATATTTTTTGAGA	1930	False	NA	NA	False	AAAAAG	-7	NA	106937678	106940157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937700_106940200
ES.33766.27	chr8	+	3513	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	45	-1106	intron_retention	FALSE	canonical	3	978	junction_12	68.5877346451244	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGGCTTGTGGCTCA	1965	False	NA	20	True	AATAAA	-21	NA	106937713	106978320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.28	chr8	+	2537	18	NIC	ENSMUSG00000060098.12	novel	1535	7	NA	NA	-9	-1102	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	261.362043240901	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	2092	False	NA	24	True	AATAAA	-25	NA	106937840	106978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106938155_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.29	chr8	+	3034	17	NNC	ENSMUSG00000060098.12	novel	851	3	NA	NA	3412	-1102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	267.347028398952	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	6821	False	NA	24	True	AATAAA	-25	NA	106942569	106978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_106943577_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.3	chr8	+	2836	18	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	-4	-1108	combination_of_known_junctions	FALSE	canonical	1	6	junction_8	262.064441743434	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGAATGGCTTGTGGCT	1902	False	NA	18	True	AATAAA	-19	NA	106937650	106978318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964590_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.4	chr8	+	2177	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	-3	-1102	combination_of_known_splicesites	FALSE	canonical	1	14	junction_4	267.8492754797	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTGTGGCTCAATGG	1903	False	NA	24	True	AATAAA	-25	NA	106937651	106978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33766.6	chr8	+	1288	1	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-14959	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTTGTCTGTTTCTTT	1906	False	NA	NA	False	AATAAA	-19	NA	106937654	106938942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937700_106938900
ES.33766.7	chr8	+	3273	16	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1104	intron_retention	FALSE	canonical	3	978	junction_12	58.2708617864309	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGGCTTGTGGCTCAAT	1906	False	NA	22	True	AATAAA	-23	NA	106937654	106978322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828
ES.33766.8	chr8	+	3781	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-27	intron_retention	FALSE	canonical	3	978	junction_12	71.072036519295	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACAGAAATTAA	1906	False	NA	NA	False	TATAAA	-31	NA	106937654	106979399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ES.33767.1	chr8	-	176	1	Intergenic	novelGene_27469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTATTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106793069	106792893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106792900_106793100
ES.33768.1	chr8	-	182	1	Intergenic	novelGene_27470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACTAAAATTAATG	NA	False	NA	NA	False	NA	NA	NA	106798034	106797852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106797900_106798000
ES.33769.1	chr8	-	3164	3	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAAAAAAACAAAAAACTTA	7327	False	NA	NA	False	NA	NA	NA	106921123	106809862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106810019_106917291_106920227_106921050
ES.33769.10	chr8	-	3520	14	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-55	-79	intron_retention	FALSE	canonical	0	0	junction_11	9.24422096781417	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAGTGCTGTAAACATA	NA	False	NA	NA	False	TATAAA	-37	NA	106863500	106857029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860519_106860591_106860965_106861241_106861310_106861454_106861569_106862988_106863118_106863201
ES.33769.11	chr8	-	3715	12	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-28	-79	intron_retention	FALSE	canonical	0	0	junction_5	8.78108410257691	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAGTGCTGTAAACATA	NA	False	NA	NA	False	TATAAA	-37	NA	106863473	106857029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859569_106859640_106859943_106860082_106860126_106860204_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.12	chr8	-	3474	13	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-28	-81	intron_retention	FALSE	canonical	3	15	junction_11	4.62706410396725	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAGTGCTGTAAACA	NA	False	NA	NA	False	TATAAA	-35	NA	106863473	106857031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.13	chr8	-	3215	15	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	29	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.95683507996715	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATCCCAAGTGCTGTAA	NA	False	NA	NA	False	TATAAA	-32	NA	106863416	106857034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861310_106861454_106861569_106862988_106863118_106863201
ES.33769.14	chr8	-	3374	15	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-15	-90	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	7.793574014428	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACACAATCCCAAGTG	NA	False	NA	NA	False	TATAAA	-26	NA	106863621	106857040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861482_106862988_106863118_106863201
ES.33769.15	chr8	-	2492	9	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	243	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.31312917337669	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACACAATCCCAAGT	NA	False	NA	NA	False	TATAAA	-25	NA	106860517	106857041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858893_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410
ES.33769.16	chr8	-	5480	9	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-39	-91	intron_retention	FALSE	canonical	3	19	junction_5	4.21307488658818	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACACAATCCCAAGT	NA	False	NA	NA	False	TATAAA	-25	NA	106863484	106857041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106863118_106863201
ES.33769.17	chr8	-	2970	13	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-50	-107	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	9.40744386111339	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAATGTACAAGA	NA	False	NA	NA	False	TATAAA	-9	NA	106863495	106857057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106860204_106860338_106860410_106860519_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.18	chr8	-	3081	15	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-7	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.11681298671002	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGTCAAGCGGACTT	NA	False	NA	NA	False	NA	NA	NA	106863452	106857264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859249_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.19	chr8	-	3108	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	112	316	-49	-316	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCCTGGTCAAGCGGAC	NA	False	NA	NA	False	NA	NA	NA	106863494	106857266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.2	chr8	-	217	1	Antisense	novelGene_ENSMUSG00000031902.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGCTAAAATGTTTA	NA	False	NA	NA	False	NA	NA	NA	106825578	106825361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106825400_106825600
ES.33769.20	chr8	-	3080	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	-405	861	-405	-861	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTGTGTTTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106864011	106857811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.21	chr8	-	179	1	Intergenic	novelGene_27475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGAAGTCATTTGT	3050	False	NA	NA	False	NA	NA	NA	106883351	106883172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106883200_106883400
ES.33769.22	chr8	-	319	1	Intergenic	novelGene_27476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATTAAAAATATAA	NA	False	NA	NA	False	NA	NA	NA	106898223	106897904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106897900_106898200
ES.33769.23	chr8	-	3744	1	Intergenic	novelGene_27477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106901790	106898046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106898000_106901800
ES.33769.24	chr8	-	2674	1	Intergenic	novelGene_27478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGAATCATTCACTGT	NA	False	NA	NA	False	NA	NA	NA	106901790	106899116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106899100_106901800
ES.33769.25	chr8	-	3174	3	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAACATAGGAAAGACAA	7324	False	NA	NA	False	NA	NA	NA	106921126	106916910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106919906_106920123_106920227_106921050
ES.33769.26	chr8	-	3389	2	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAACATAGGAAAGACAA	7327	False	NA	NA	False	NA	NA	NA	106921123	106916910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106920227_106921050
ES.33769.27	chr8	-	2500	4	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGCCAACATAGGAAAG	7327	False	NA	NA	False	NA	NA	NA	106921123	106916914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106919114_106919780_106919906_106920123_106920227_106921050
ES.33769.28	chr8	-	2389	5	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGCCAACATAGGAAAG	7327	False	NA	NA	False	NA	NA	NA	106921123	106916914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106917807_106917917_106919114_106919780_106919906_106920123_106920227_106921050
ES.33769.3	chr8	-	2097	1	Intergenic	novelGene_27474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	106851823	106849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106849700_106851800
ES.33769.30	chr8	-	2686	3	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	7327	False	NA	NA	False	NA	NA	NA	106921123	106916946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106919114_106919780_106920227_106921050
ES.33769.31	chr8	-	1981	2	Antisense	novelGene_ENSMUSG00000031904.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	9413	False	NA	NA	False	NA	NA	NA	106919037	106916946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_106917798_106917907
ES.33769.4	chr8	-	6089	14	NNC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	6	3101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.18499131583148	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGAAAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	106863439	106853849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859461_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.5	chr8	-	6648	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	-13	-3099	-13	3099	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTGTCTAGAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	106863619	106853851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.6	chr8	-	6043	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	133	-2640	-28	2640	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTCTGTACACCAT	NA	False	NA	NA	False	NA	NA	NA	106863473	106854310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.7	chr8	-	5832	15	NIC	ENSMUSG00000084128.11	novel	3536	15	NA	NA	-26	2434	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	6.95613075653706	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATATCGTATGAGGT	NA	False	NA	NA	False	AAAAAG	-25	NA	106863471	106854516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860519_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.33769.8	chr8	-	2610	8	ISM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	3300	-133	454	133	3prime_fragment	FALSE	canonical	3	19	junction_5	3.91751691451488	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAAGGCTGCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	106860306	106856817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204
ES.33769.9	chr8	-	3567	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	-34	3	-34	-3	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCATGCTCTACATGT	NA	False	NA	NA	False	TATAAA	-16	NA	106863640	106856953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ES.3377.1	chr10	-	1820	13	FSM	ENSMUSG00000034958.12	ENSMUST00000047408.6	3736	13	47	1869	-1	-1869	multi-exon	FALSE	canonical	0	0	junction_1	0.645497224367903	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAATGAGAGACCCTT	NA	False	NA	NA	False	NA	NA	NA	81066620	81042210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81042576_81043347_81043381_81043667_81043743_81045886_81045923_81046357_81046457_81047679_81047767_81048305_81048438_81048682_81048786_81049056_81049243_81050555_81050778_81054988_81055048_81060257_81060386_81066325
ES.3377.2	chr10	-	136	1	Intergenic	novelGene_2605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	1356	False	NA	NA	False	NA	NA	NA	81049641	81049505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81049500_81049600
ES.3377.3	chr10	-	175	1	Intergenic	novelGene_2606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGAGGGAGTTCCA	8993	False	NA	NA	False	NA	NA	NA	81051176	81051001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81051000_81051200
ES.33770.1	chr8	-	1591	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-64	-281	-62	281	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTTTTTTAGATC	NA	False	NA	0	True	AATAAA	-24	NA	106937629	106927067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ES.33770.11	chr8	-	2266	2	ISM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	6870	0	6862	0	3prime_fragment	FALSE	canonical	3	127	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCCTGGTGGTTTTTCTG	4894	False	NA	-6	True	NA	NA	NA	106930695	106927348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_106927782_106928862
ES.33770.2	chr8	-	252	2	Genic_Genomic	ENSMUSG00000033106.7	novel	2959	3	NA	NA	7898	277	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	5930	False	NA	-4	True	AATAAA	-20	NA	106929659	106927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_106927199_106929534
ES.33770.3	chr8	-	1629	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	-9	277	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	NA	False	NA	-4	True	AATAAA	-20	NA	106937576	106927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
ES.33770.4	chr8	-	3508	3	NIC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	73	277	intron_retention	FALSE	canonical	3	127	junction_1	1.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	NA	False	NA	-4	True	AATAAA	-20	NA	106937484	106927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_106927782_106928862_106931173_106936996
ES.33770.5	chr8	-	2885	1	Genic_Genomic	ENSMUSG00000033106.7	novel	NA	NA	NA	NA	7601	277	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	5633	False	NA	-4	True	AATAAA	-20	NA	106929956	106927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_106927100_106930000
ES.33770.7	chr8	-	2269	4	NNC	ENSMUSG00000033106.7	novel	1112	2	NA	NA	2	277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.587860903723	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGCAGTTCTTTTTTA	NA	False	NA	-4	True	AATAAA	-20	NA	106937563	106927071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_106927197_106929534_106931173_106936996_106937290_106937350
ES.33770.9	chr8	-	1609	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	-360	-3	-358	3	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGGTTTTTCTGTCA	NA	False	NA	-3	True	NA	NA	NA	106937925	106927345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ES.33771.1	chr8	-	157	1	Intergenic	novelGene_27480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	106949707	106949550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106949600_106949700
ES.33772.1	chr8	-	153	1	Intergenic	novelGene_27481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	106985487	106985334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_106985300_106985500
ES.33773.1	chr8	-	178	1	Intergenic	novelGene_27482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACTTTTTAGA	9078	False	NA	NA	False	NA	NA	NA	107029142	107028964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107029000_107029100
ES.33774.1	chr8	+	156	1	Intergenic	novelGene_27483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTAAAAATATCT	6552	False	NA	NA	False	NA	NA	NA	107054800	107054956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107054800_107055000
ES.33775.1	chr8	+	2376	5	FSM	ENSMUSG00000031907.10	ENSMUST00000212874.2	2195	5	-102	-79	-30	79	multi-exon	FALSE	canonical	2	3	junction_1	7.8541390362025	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGCAGAGTCACCAAG	NA	False	NA	NA	False	ACTAAA	-13	NA	107141928	107152440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107142119_107142335_107142403_107145702_107145830_107146146_107146243_107150544
ES.33775.2	chr8	+	3692	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	-6	-1054	6	345	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTGTTTCCCAATAA	NA	False	NA	NA	False	AATAAA	-19	NA	107141964	107153575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
ES.33775.3	chr8	+	5769	3	NIC	ENSMUSG00000031907.10	novel	2632	4	NA	NA	1	-1	intron_retention	FALSE	canonical	2	16	junction_1	4.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACAGGCTTCTTGTAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	107141971	107152359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107145830_107146146_107146243_107150544
ES.33775.4	chr8	+	2338	5	NIC	ENSMUSG00000031907.10	novel	2195	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	8.30662386291807	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACAGGCTTCTTGTAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	107141979	107152359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107142119_107142335_107142403_107145702_107145830_107146052_107146243_107150544
ES.33775.5	chr8	+	2459	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	12	161	3	0	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGGCTTCTTGTAGAA	NA	False	NA	NA	False	ATTAAA	-19	NA	107141982	107152360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
ES.33775.6	chr8	+	3289	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	59	-716	-1	7	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTTGCTTTTCTGTTAT	NA	False	NA	NA	False	AATACA	-25	NA	107142029	107153237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
ES.33775.7	chr8	+	5778	3	NIC	ENSMUSG00000031907.10	novel	2639	4	NA	NA	25	-2	intron_retention	FALSE	canonical	2	7	junction_1	9	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACAGGCTTCTTGTAG	NA	False	NA	NA	False	ATTAAA	-17	NA	107142055	107152358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107145830_107146052_107146243_107150544
ES.33775.8	chr8	+	2365	4	FSM	ENSMUSG00000031907.10	ENSMUST00000213045.2	3447	4	212	870	140	0	multi-exon	FALSE	canonical	2	7	junction_2	7.48331477354788	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGGCTTCTTGTAGAA	NA	False	NA	NA	False	ATTAAA	-19	NA	107142170	107152360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107142403_107145702_107145830_107146052_107146243_107150544
ES.33776.1	chr8	-	2246	3	Intergenic	novelGene_27484	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTAAGTGTCAGACAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	107178139	107161381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107163368_107166936_107167008_107177950
ES.33776.2	chr8	-	1633	3	Intergenic	novelGene_27485	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATCTCCT	NA	False	NA	NA	False	TTTAAA	-28	NA	107178134	107161935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107163368_107165662_107165809_107178079
ES.33776.3	chr8	-	984	3	Intergenic	novelGene_27486	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGCTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	107178132	107170245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107170526_107171392_107171915_107177950
ES.33777.1	chr8	+	3150	1	Intergenic	novelGene_27487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTATAACATGTAAC	743	False	NA	NA	False	AATAAA	-15	NA	107183844	107186994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107183800_107187000
ES.33778.1	chr8	-	153	1	Intergenic	novelGene_27488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAATCAACAAT	NA	False	NA	NA	False	NA	NA	NA	107188046	107187893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107187900_107188000
ES.33779.2	chr8	+	3282	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-67	1169	-67	-1169	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTAGGGGAGTGGATTTA	NA	False	NA	10	True	ATTAAA	-24	NA	107237455	107282760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ES.33779.3	chr8	+	2933	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	-34	1485	-34	-1485	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCCTGTTTTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	107237488	107282444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ES.33779.4	chr8	+	3075	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	24	1285	24	-1285	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGTCTCGTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	107237546	107282644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ES.33779.5	chr8	+	2304	9	ISM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	28902	1171	28902	-1171	3prime_fragment	FALSE	canonical	3	46	junction_2	3.63145976158349	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAGGGGAGTGGATT	NA	False	NA	8	True	ATTAAA	-22	NA	107266424	107282758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ES.33779.6	chr8	+	2227	8	ISM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	30360	1173	30360	-1173	3prime_fragment	FALSE	canonical	3	46	junction_1	3.65334624358412	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCTAGGGGAGTGGA	NA	False	NA	6	True	ATTAAA	-20	NA	107267882	107282756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ES.33779.7	chr8	+	3142	3	ISM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	33239	6892	33239	-6892	internal_fragment	FALSE	canonical	3	52	junction_1	2	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGTGGTGGCTTGTGC	NA	False	NA	NA	False	NA	NA	NA	107270761	107277037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107270895_107271634_107271860_107274253
ES.3378.1	chr10	-	603	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	0	1	0	-1	multi-exon	FALSE	canonical	3	958	junction_1	11.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTGTCATGCCCTGT	3094	False	NA	-1	True	AATAAA	-28	NA	81102768	81100547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81100832_81101484_81101642_81102606
ES.3378.2	chr10	-	1229	2	FSM	ENSMUSG00000034932.5	ENSMUST00000145452.2	530	2	9	-708	9	-9	multi-exon	FALSE	canonical	3	981	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACGCACATGTGTGTCA	3113	False	NA	-9	True	AATAAA	-20	NA	81102749	81100555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81101642_81102606
ES.33780.1	chr8	-	158	1	Intergenic	novelGene_27489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107281327	107281169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107281200_107281300
ES.33781.1	chr8	-	190	1	Antisense	novelGene_ENSMUSG00000061048.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAAGAACAATTTTGT	9109	False	NA	NA	False	NA	NA	NA	107284093	107283903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107283900_107284100
ES.33782.1	chr8	-	176	1	Intergenic	novelGene_27490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCAATCTTTAAAAAAAAA	3136	False	NA	NA	False	NA	NA	NA	107290066	107289890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107289900_107290100
ES.33783.1	chr8	-	161	1	Intergenic	novelGene_27491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	616	False	NA	NA	False	NA	NA	NA	107292586	107292425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107292400_107292600
ES.33784.1	chr8	-	179	1	Intergenic	novelGene_27492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGCTATTGTTCAGA	NA	False	NA	NA	False	NA	NA	NA	107296950	107296771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107296800_107297000
ES.33785.1	chr8	-	513	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	-88	-83	-88	83	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGCCAGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	107300070	107299557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107299600_107300100
ES.33786.1	chr8	-	178	1	Intergenic	novelGene_27493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	107300297	107300119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107300100_107300300
ES.33787.1	chr8	+	1424	3	NNC	ENSMUSG00000099139.2	novel	1341	3	NA	NA	-73	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGTTTTCTGAGTCTG	NA	False	NA	NA	False	AATAAA	-12	NA	107313701	107321444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107314050_107319506_107319962_107320823
ES.33788.1	chr8	-	177	1	Intergenic	novelGene_27494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAACCTCCAGTA	NA	False	NA	NA	False	NA	NA	NA	107322424	107322247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107322200_107322400
ES.33789.1	chr8	+	4516	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-84	-2	-84	2	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTCACTTGATTTGAC	4965	False	NA	28	True	ATTAAA	-20	NA	107329898	107396880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.10	chr8	+	3949	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-18	-7	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	5031	False	NA	19	True	ATTAAA	-11	NA	107329964	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395989_107396480
ES.33789.11	chr8	+	4671	15	NIC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-17	0	intron_retention	FALSE	canonical	3	808	junction_8	96.5062385632797	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5032	False	NA	26	True	ATTAAA	-18	NA	107329965	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.15	chr8	+	4436	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-17	-4	intron_retention	FALSE	non_canonical	0	0	junction_10	262.622618980163	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5032	False	NA	22	True	ATTAAA	-14	NA	107329965	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387666_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.16	chr8	+	3200	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-16	1246	-16	-362	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTCTGTTGCCCTGCCC	5033	False	NA	NA	False	NA	NA	NA	107329966	107395632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.19	chr8	+	5598	13	NIC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	808	junction_7	86.379451967596	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5042	False	NA	26	True	ATTAAA	-18	NA	107329975	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107391056_107392025_107392963_107395037
ES.33789.20	chr8	+	4265	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-4	-7	intron_retention	TRUE	canonical	0	0	junction_1	262.220483986706	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	5045	False	NA	19	True	ATTAAA	-11	NA	107329978	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330057_107330962_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.22	chr8	+	4415	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_2	262.622618980163	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5052	False	NA	26	True	ATTAAA	-18	NA	107329985	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375644_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.24	chr8	+	3930	17	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5052	False	NA	26	True	ATTAAA	-18	NA	107329985	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395358_107395854
ES.33789.26	chr8	+	4090	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	11	-4	intron_retention	FALSE	non_canonical	0	0	junction_14	261.086192664415	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5060	False	NA	22	True	ATTAAA	-14	NA	107329993	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107395218
ES.33789.27	chr8	+	4069	17	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5063	False	NA	26	True	ATTAAA	-18	NA	107329996	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395740_107396086
ES.33789.29	chr8	+	4046	14	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-13	0	intron_retention	FALSE	non_canonical	0	0	junction_3	278.089594349028	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5064	False	NA	26	True	ATTAAA	-18	NA	107329997	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375825_107383492_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.3	chr8	+	3076	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	-32	1386	-32	-502	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTTTTTGTTCTTT	5017	False	NA	15	True	TATAAA	-22	NA	107329950	107395492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.30	chr8	+	4689	15	NIC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	808	junction_7	96.8324083461857	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5064	False	NA	25	True	ATTAAA	-17	NA	107329997	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.31	chr8	+	4378	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-13	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	261.680942285745	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5064	False	NA	25	True	ATTAAA	-17	NA	107329997	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390568_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.32	chr8	+	4318	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-13	-4	intron_retention	FALSE	non_canonical	0	0	junction_14	254.092424129489	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5064	False	NA	22	True	ATTAAA	-14	NA	107329997	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392125_107392879_107392963_107395037
ES.33789.33	chr8	+	4142	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-12	-4	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5065	False	NA	22	True	ATTAAA	-14	NA	107329998	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107396059_107396326
ES.33789.34	chr8	+	4430	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_6	261.982815382146	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5066	False	NA	25	True	ATTAAA	-17	NA	107329999	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384353_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.35	chr8	+	3903	14	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	-8	intron_retention	TRUE	canonical	0	0	junction_3	278.089594349028	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTTGTGAGGCTCAC	5066	False	NA	18	True	ATTAAA	-10	NA	107329999	107396870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375722_107383522_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.36	chr8	+	4349	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_1	262.220483986706	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5066	False	NA	25	True	ATTAAA	-17	NA	107329999	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330981_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.39	chr8	+	4188	15	NIC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_11	270.246939230152	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5066	False	NA	26	True	ATTAAA	-18	NA	107329999	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.4	chr8	+	4219	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-32	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5017	False	NA	25	True	ATTAAA	-17	NA	107329950	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107396431_107396672
ES.33789.40	chr8	+	4396	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	-9	intron_retention	FALSE	canonical	0	0	junction_7	347.835529461203	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTTGTGAGGCTCA	5066	False	NA	17	True	ATTAAA	-9	NA	107329999	107396869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384824_107384952_107386227_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.41	chr8	+	4395	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	-11	intron_retention	FALSE	non_canonical	0	0	junction_13	259.725615901773	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAACTGTTGTGAGGCT	5066	False	NA	15	True	ATTAAA	-7	NA	107329999	107396867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392032_107392157_107392818_107392963_107395037
ES.33789.44	chr8	+	4098	17	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_16	252.899923079763	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5066	False	NA	26	True	ATTAAA	-18	NA	107329999	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395514_107395828
ES.33789.45	chr8	+	4289	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-11	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5066	False	NA	25	True	ATTAAA	-17	NA	107329999	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107396545_107396667
ES.33789.46	chr8	+	4195	17	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5066	False	NA	26	True	ATTAAA	-18	NA	107329999	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107396274_107396491
ES.33789.48	chr8	+	4318	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-11	-4	intron_retention	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5066	False	NA	22	True	ATTAAA	-14	NA	107329999	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395248_107395338
ES.33789.5	chr8	+	4322	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	5018	False	NA	19	True	ATTAAA	-11	NA	107329951	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395465_107395596
ES.33789.51	chr8	+	3667	12	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-7	-7	intron_retention	FALSE	canonical	0	0	junction_5	295.760373185975	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	5070	False	NA	19	True	ATTAAA	-11	NA	107330003	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380474_107387451_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.52	chr8	+	4326	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_5	259.968630586248	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5079	False	NA	26	True	ATTAAA	-18	NA	107330012	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380532_107383509_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.53	chr8	+	3200	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	103	1127	75	-243	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTTCGTGGTATTCC	5152	False	NA	NA	False	NA	NA	NA	107330085	107395751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.54	chr8	+	4305	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	87	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	262.220483986706	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5164	False	NA	25	True	ATTAAA	-17	NA	107330097	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330179_107330931_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.55	chr8	+	4229	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	94	-3	intron_retention	FALSE	canonical	0	0	junction_1	262.220483986706	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGAGGCTCACTTGAT	5171	False	NA	23	True	ATTAAA	-15	NA	107330104	107396875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330162_107330981_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.57	chr8	+	4469	17	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	108	0	intron_retention	FALSE	canonical	0	0	junction_2	338.589145388626	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5185	False	NA	26	True	ATTAAA	-18	NA	107330118	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107366277_107366453_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.58	chr8	+	4349	16	NNC	ENSMUSG00000000303.13	novel	789	4	NA	NA	361	0	intron_retention	FALSE	canonical	1	13	junction_1	259.163954969736	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5438	False	NA	26	True	ATTAAA	-18	NA	107330371	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330483_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.59	chr8	+	4378	16	NNC	ENSMUSG00000000303.13	novel	789	4	NA	NA	-206	-1	intron_retention	FALSE	canonical	0	0	junction_1	262.220483986706	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5635	False	NA	25	True	ATTAAA	-17	NA	107330568	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330710_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.60	chr8	+	4401	16	NNC	ENSMUSG00000000303.13	novel	789	4	NA	NA	-105	0	intron_retention	FALSE	canonical	0	0	junction_1	262.220483986706	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5736	False	NA	26	True	ATTAAA	-18	NA	107330669	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330833_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.61	chr8	+	4474	15	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	701	-1	-91	1	3prime_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCACTTGATTTGA	5750	False	NA	27	True	ATTAAA	-19	NA	107330683	107396879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.62	chr8	+	3039	15	ISM	ENSMUSG00000000303.13	ENSMUST00000167688.2	3203	17	717	506	-47	-506	internal_fragment	FALSE	canonical	3	808	junction_7	90.1298383172967	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTCTGTTTTTGTT	5794	False	NA	11	True	TATAAA	-18	NA	107330727	107395488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.65	chr8	+	4684	14	NIC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-27	0	intron_retention	FALSE	canonical	3	808	junction_6	93.5312497219844	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5814	False	NA	26	True	ATTAAA	-18	NA	107330747	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.66	chr8	+	4016	14	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-27	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	277.078887790412	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5814	False	NA	25	True	ATTAAA	-17	NA	107330747	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390509_107392094_107392157_107392818_107392963_107395037
ES.33789.67	chr8	+	4395	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-27	1	intron_retention	FALSE	non_canonical	0	0	junction_13	348.802236231364	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCACTTGATTTGA	5814	False	NA	27	True	ATTAAA	-19	NA	107330747	107396879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392117_107392818_107392988_107395037
ES.33789.68	chr8	+	4304	16	NNC	ENSMUSG00000000303.13	novel	789	4	NA	NA	0	-10	intron_retention	FALSE	canonical	0	0	junction_1	347.913820746843	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAACTGTTGTGAGGCTC	5841	False	NA	16	True	ATTAAA	-8	NA	107330774	107396868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330833_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384353_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.69	chr8	+	3991	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_15	260.574101211579	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5916	False	NA	25	True	ATTAAA	-17	NA	107330849	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395514_107395828
ES.33789.7	chr8	+	4405	17	NNC	ENSMUSG00000000303.13	novel	3203	17	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	254.482563253359	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	5023	False	NA	22	True	ATTAAA	-14	NA	107329956	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395788_107395834
ES.33789.70	chr8	+	4181	16	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	114	-10	intron_retention	FALSE	non_canonical	0	0	junction_15	262.220483986706	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAACTGTTGTGAGGCTC	5955	False	NA	16	True	ATTAAA	-8	NA	107330888	107396868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107396068_107396144
ES.33789.71	chr8	+	4163	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	145	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	270.341630051266	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTTGTGAGGCTCAC	5986	False	NA	18	True	ATTAAA	-10	NA	107330919	107396870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390556_107390845_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.72	chr8	+	4204	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	336	1	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCACTTGATTTGA	6177	False	NA	27	True	ATTAAA	-19	NA	107331110	107396879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107331197_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.73	chr8	+	1859	1	Intergenic	novelGene_27495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1070	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAGGAAGGAAA	6343	False	NA	NA	False	NA	NA	NA	107331276	107333135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107331300_107333100
ES.33789.74	chr8	+	4164	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	1347	-9	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTTGTGAGGCTCA	7188	False	NA	17	True	ATTAAA	-9	NA	107332121	107396869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107332178_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.75	chr8	+	4203	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	1416	0	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	7257	False	NA	26	True	ATTAAA	-18	NA	107332190	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107332277_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.76	chr8	+	3635	1	Intergenic	novelGene_27497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1069	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCATAAATGTGAGG	2446	False	NA	NA	False	NA	NA	NA	107337350	107340985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107337400_107341000
ES.33789.77	chr8	+	4146	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	15569	-4	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGAGGCTCACTTGA	1907	False	NA	22	True	ATTAAA	-14	NA	107346343	107396874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107346377_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.78	chr8	+	4226	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	15769	-6	intron_retention	FALSE	canonical	1	1	junction_1	270.912903015726	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGTGAGGCTCACTT	2107	False	NA	20	True	ATTAAA	-12	NA	107346543	107396872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107346659_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.79	chr8	+	4240	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	22094	-7	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	8432	False	NA	19	True	ATTAAA	-11	NA	107352868	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107352999_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.8	chr8	+	3598	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	261.086192664415	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5024	False	NA	26	True	ATTAAA	-18	NA	107329957	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392140_107395733
ES.33789.80	chr8	+	681	2	Intergenic	novelGene_27498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTCCCAGAGGTGCAAG	9214	False	NA	NA	False	NA	NA	NA	107353650	107355297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107353705_107354670
ES.33789.81	chr8	+	4382	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	27746	0	intron_retention	FALSE	canonical	0	0	junction_1	271.157496217792	1401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	NA	False	NA	26	True	ATTAAA	-18	NA	107358520	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107358786_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.82	chr8	+	3992	15	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	44880	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	271.157496217792	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	1318	False	NA	19	True	ATTAAA	-11	NA	107375654	107396871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386276_107386371_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.83	chr8	+	3742	13	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	49459	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	289.167483188088	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGGCTCACTTGATTT	5897	False	NA	25	True	ATTAAA	-17	NA	107380233	107396877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107380283_107380395_107380545_107383503_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.84	chr8	+	3745	12	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	50408	9	49616	-9	3prime_fragment	FALSE	canonical	3	808	junction_4	85.5791161672457	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTTGTGAGGCTCA	6054	False	NA	17	True	ATTAAA	-9	NA	107380390	107396869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.86	chr8	+	2782	9	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	55472	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	349.292767603339	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	NA	False	NA	26	True	ATTAAA	-18	NA	107386246	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395517_107395852
ES.33789.87	chr8	+	2719	6	ISM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	58530	0	57738	0	3prime_fragment	FALSE	canonical	3	981	junction_1	67.3664604977878	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	NA	False	NA	26	True	ATTAAA	-18	NA	107388512	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ES.33789.88	chr8	+	2170	5	NNC	ENSMUSG00000000303.13	novel	4430	16	NA	NA	60175	0	intron_retention	FALSE	non_canonical	0	0	junction_4	474.354824999177	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	NA	False	NA	26	True	ATTAAA	-18	NA	107390949	107396878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107391056_107392025_107392157_107392818_107392963_107395037_107395865_107395916
ES.3379.10	chr10	-	3093	20	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_19	34.6687530446818	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7809	False	NA	8	True	AATAAA	-27	NA	81121646	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119574_81121434
ES.3379.11	chr10	-	3233	23	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	48.2975454092854	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	6973	False	NA	8	True	AATAAA	-27	NA	81127425	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81125422_81125496_81126881_81127110_81127297
ES.3379.13	chr10	-	2927	21	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	1725	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	33.4344134089414	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	9577	False	NA	8	True	AATAAA	-27	NA	81119878	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81119755
ES.3379.14	chr10	-	2989	22	NNC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.5417495351888	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	6989	False	NA	8	True	AATAAA	-27	NA	81127409	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81125422_81125496_81127297
ES.3379.15	chr10	-	2897	19	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_10	45.8247129940565	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7848	False	NA	8	True	AATAAA	-27	NA	81121607	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119574_81121434
ES.3379.16	chr10	-	2591	18	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	36.4098165401095	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAATACAAGACTGAG	7295	False	NA	7	True	AATAAA	-26	NA	81127103	81109041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117103_81126881
ES.3379.17	chr10	-	3009	21	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	33.0607017469382	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATAATACAAGACTGA	7802	False	NA	6	True	AATAAA	-25	NA	81121653	81109042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121446
ES.3379.18	chr10	-	3042	21	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-10	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	38.6794519092502	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	7287	False	NA	-5	True	AATAAA	-14	NA	81127111	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116725_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
ES.3379.19	chr10	-	2870	21	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.6711553628444	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	7837	False	NA	-5	True	AATAAA	-14	NA	81121618	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109741_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
ES.3379.2	chr10	-	3076	21	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-86	5	combination_of_known_junctions	TRUE	canonical	0	0	junction_20	33.8096140173176	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAGACTGAGGACTCT	7754	False	NA	13	True	AATAAA	-32	NA	81121701	81109035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
ES.3379.20	chr10	-	4422	19	NIC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	69	8	intron_retention	FALSE	canonical	3	20	junction_18	31.4499406268454	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	7052	False	NA	-5	True	AATAAA	-14	NA	81127346	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81118875_81119329_81119574_81127297
ES.3379.21	chr10	-	2930	20	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-23	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	44.6436800873892	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	7817	False	NA	-5	True	AATAAA	-14	NA	81121638	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112202_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81121446
ES.3379.22	chr10	-	3053	22	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	84	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	37.5923956222104	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	7067	False	NA	-5	True	AATAAA	-14	NA	81127331	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881_81127110_81127297
ES.3379.23	chr10	-	2859	21	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	1709	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	33.8096140173176	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTATATTAGAAAATAA	9561	False	NA	-5	True	AATAAA	-14	NA	81119894	81109053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81119826
ES.3379.24	chr10	-	2899	21	NNC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	42.261684774746	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	7842	False	NA	-13	True	AATAAA	-6	NA	81121613	81109061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109699_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
ES.3379.25	chr10	-	2891	21	NNC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	1730	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	49.6184189590922	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	9582	False	NA	-13	True	AATAAA	-6	NA	81119873	81109061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115180_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117263_81118771_81118875_81119329_81119440_81119516_81119574_81119755
ES.3379.26	chr10	-	4320	19	NNC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	-29	0	intron_retention	FALSE	non_canonical	0	0	junction_10	45.2652334361007	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	7811	False	NA	-13	True	AATAAA	-6	NA	81121644	81109061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115347_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81118875_81119329_81119440_81119516_81119574_81121446
ES.3379.3	chr10	-	3259	21	FSM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	-230	-5	84	5	multi-exon	FALSE	canonical	3	41	junction_20	26.4920271025077	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAGACTGAGGACTCT	7067	False	NA	13	True	AATAAA	-32	NA	81127331	81109035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
ES.3379.30	chr10	-	3954	16	NIC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	-2660	0	intron_retention	FALSE	canonical	3	101	junction_14	18.5572986539888	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	NA	False	NA	-13	True	AATAAA	-6	NA	81118611	81109061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938
ES.3379.32	chr10	-	3869	11	ISM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	5456	4986	-30	431	internal_fragment	FALSE	canonical	3	101	junction_6	14.5825237870541	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAAGCTAGTGGGTTG	7810	False	NA	NA	False	NA	NA	NA	81121645	81114026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516
ES.3379.4	chr10	-	4399	18	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	3	4	intron_retention	FALSE	canonical	0	0	junction_10	47.0921940504414	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAAGACTGAGGACTC	7855	False	NA	12	True	AATAAA	-31	NA	81121600	81109036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81118875_81119329_81119574_81121434
ES.3379.6	chr10	-	3084	23	NNC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	52.5812240630336	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7059	False	NA	8	True	AATAAA	-27	NA	81127339	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81109224_81109482_81109530_81109699_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81125422_81125496_81126881_81127110_81127297
ES.3379.7	chr10	-	2923	21	FSM	ENSMUSG00000034917.9	ENSMUST00000219479.2	2901	21	-1	-21	-1	0	multi-exon	FALSE	canonical	3	20	junction_20	30.1312130522487	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	6982	False	NA	8	True	AATAAA	-27	NA	81127416	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81127297
ES.3379.8	chr10	-	3350	19	NIC	ENSMUSG00000034917.9	novel	3024	21	NA	NA	-23	0	intron_retention	FALSE	canonical	3	41	junction_18	26.2260472728079	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7326	False	NA	8	True	AATAAA	-27	NA	81127072	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109530_81109636_81109904_81110216_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
ES.3379.9	chr10	-	2949	20	NIC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	69	0	intron_retention	FALSE	canonical	3	20	junction_19	30.807327257365	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7052	False	NA	8	True	AATAAA	-27	NA	81127346	81109040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81127297
ES.33790.1	chr8	-	2386	1	Intergenic	novelGene_27496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	107337106	107334720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107334700_107337100
ES.33791.1	chr8	-	156	1	Intergenic	novelGene_27499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	107354685	107354529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107354500_107354700
ES.33792.1	chr8	+	3790	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8615	-570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.0693653892709	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCGAGCTGGTTGACTT	NA	False	NA	45	True	AATAAA	-38	NA	107401084	107577501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401224_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.10	chr8	+	1784	9	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	0	4280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.4924236626173	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAGTTTCATTTACTA	1113	False	NA	NA	False	AATAAA	-14	NA	107409699	107437174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107413348_107413453_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107436971
ES.33792.11	chr8	+	3953	19	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	2	-574	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	33.9796598563114	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCACCGAGCTGGTTG	1115	False	NA	41	True	AATAAA	-42	NA	107409701	107577497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107570297_107570418_107576810
ES.33792.12	chr8	+	5539	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	4	-1134	4	1134	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCAGCACTCACATGT	1117	False	NA	NA	False	NA	NA	NA	107409703	107579205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.13	chr8	+	7358	17	NIC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	13	3103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	28.6726541106679	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTTTTCTATTTTCTC	1126	False	NA	NA	False	AATAAA	-14	NA	107409712	107581174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107533672_107533825_107545087_107545202_107576810
ES.33792.14	chr8	+	3839	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	15	-576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.9555574255953	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTCACCGAGCTGGT	1128	False	NA	39	True	AATAAA	-40	NA	107409714	107577495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107415283_107415925_107419198_107419337_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.15	chr8	+	3142	13	NIC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	17	-602	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.4068477302217	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTGGAATGATCAGCC	1130	False	NA	13	True	AATAAA	-14	NA	107409716	107577469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107409888_107415283_107415925_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.18	chr8	+	3722	17	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	3	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.4735817193584	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGTCACCGAGCTGG	1163	False	NA	38	True	AATAAA	-39	NA	107409749	107577494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426798_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.19	chr8	+	3649	17	ISM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	5582	574	5504	-574	3prime_fragment	FALSE	canonical	3	69	junction_1	15.1779805557261	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCACCGAGCTGGTTG	6695	False	NA	41	True	AATAAA	-42	NA	107415281	107577497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.2	chr8	+	5082	19	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8606	1134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5530545718742	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCAGCACTCACATGT	NA	False	NA	NA	False	NA	NA	NA	107401093	107579205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401160_107415283_107415500_107415838_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.20	chr8	+	200	1	Intergenic	novelGene_27503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATCTTTGTTTGTT	7089	False	NA	NA	False	NA	NA	NA	107513349	107513549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107513300_107513500
ES.33792.21	chr8	+	2868	1	Genic_Genomic	ENSMUSG00000041949.7	novel	NA	NA	NA	NA	166560	1134	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCAGCACTCACATGT	NA	False	NA	NA	False	NA	NA	NA	107576337	107579205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_107576300_107579200
ES.33792.3	chr8	+	3684	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8599	-570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.1497045521553	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCGAGCTGGTTGACTT	NA	False	NA	45	True	AATAAA	-38	NA	107401100	107577501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401160_107415283_107415899_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.4	chr8	+	3682	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8599	-598	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	27.4709031346103	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAATGATCAGCCAATG	NA	False	NA	17	True	AATAAA	-18	NA	107401100	107577473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401160_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.5	chr8	+	1225	1	Intergenic	novelGene_27500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAATGGGAACAATGGC	NA	False	NA	NA	False	NA	NA	NA	107401101	107402326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107401100_107402300
ES.33792.6	chr8	+	5409	18	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8594	1134	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	27.4709031346103	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACCAGCACTCACATGT	NA	False	NA	NA	False	NA	NA	NA	107401105	107579205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401160_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.7	chr8	+	3948	19	NNC	ENSMUSG00000041949.7	novel	4409	18	NA	NA	-8593	-571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.2987586205348	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACCGAGCTGGTTGACT	NA	False	NA	44	True	AATAAA	-45	NA	107401106	107577500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107401160_107409642_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ES.33792.8	chr8	+	3183	14	NNC	ENSMUSG00000041949.7	novel	4005	14	NA	NA	-1	-4125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	30.66231424392	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATATTCCTGTATCAT	1112	False	NA	NA	False	ATTAAA	-23	NA	107409698	107471169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107470670
ES.33792.9	chr8	+	1722	8	NNC	ENSMUSG00000041949.7	novel	2722	8	NA	NA	-1	-2055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.9844221560709	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCAGGTGTGGTTTTCTTG	1112	False	NA	NA	False	NA	NA	NA	107409698	107430839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107430595
ES.33793.1	chr8	-	162	1	Intergenic	novelGene_27501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	107442333	107442171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107442200_107442300
ES.33794.1	chr8	-	192	1	Intergenic	novelGene_27502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	107442553	107442361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107442400_107442600
ES.33795.1	chr8	-	2332	1	Antisense	novelGene_ENSMUSG00000041949.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGCCAGGCAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	107453550	107451218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107451200_107453600
ES.33796.1	chr8	-	363	1	Intergenic	novelGene_27504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCCATTTAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	107529499	107529136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107529100_107529500
ES.33797.1	chr8	-	177	1	Intergenic	novelGene_27505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	107551451	107551274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107551300_107551500
ES.33798.1	chr8	+	5033	1	Intergenic	novelGene_27508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAGAAAAAAAAAA	8575	False	NA	NA	False	NA	NA	NA	107589523	107594556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107589500_107594600
ES.33799.1	chr8	-	4905	3	Intergenic	novelGene_27507	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAATACTTGAC	NA	False	NA	NA	False	CATAAA	-15	NA	107593062	107587525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107588735_107588932_107590017_107590450
ES.33799.2	chr8	-	5206	1	Intergenic	novelGene_27506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAAATACTTGAC	NA	False	NA	NA	False	CATAAA	-15	NA	107592731	107587525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107587500_107592700
ES.338.1	chr1	+	177	1	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGAACTTCA	NA	False	NA	NA	False	NA	NA	NA	38192593	38192770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38192600_38192800
ES.3380.1	chr10	-	2263	1	Antisense	novelGene_ENSMUSG00000034902.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGCGCCGCCTGCACT	3308	False	NA	NA	False	NA	NA	NA	81131090	81128827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81128800_81131100
ES.33800.1	chr8	-	3813	1	Antisense	novelGene_ENSMUSG00000031910.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGGGGAAAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	107596953	107593140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107593100_107597000
ES.33801.1	chr8	+	3992	1	ISM	ENSMUSG00000031910.15	ENSMUST00000034385.12	5912	4	8651	18	8002	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCGTGTCCATTGC	NA	False	NA	NA	False	AATAAA	-12	NA	107605524	107609516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107605500_107609500
ES.33801.2	chr8	+	1523	1	ISM	ENSMUSG00000031910.15	ENSMUST00000034385.12	5912	4	9399	1739	8750	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCTTTTTTATTAAAT	NA	False	NA	NA	False	NA	NA	NA	107606272	107607795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107606300_107607800
ES.33802.1	chr8	+	2415	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	-157	-26	-142	26	multi-exon	FALSE	canonical	3	1046	junction_1	100.936996902771	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATGAGCACAGATTT	NA	False	NA	38	True	AATAAA	-43	NA	107620125	107649746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.10	chr8	+	2098	16	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-7	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	322.528317447562	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATTTTAAATTATTTTC	NA	False	NA	17	True	AATAAA	-22	NA	107620260	107649725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620345_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.11	chr8	+	2247	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	421.223292921937	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGACTAGACATTTTAAA	NA	False	NA	9	True	AATAAA	-14	NA	107620265	107649717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624888_107625073_107625159_107627477_107627568_107630864_107631081_107632763_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.15	chr8	+	3527	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	315.012493551843	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTAAATTATTTTCT	NA	False	NA	18	True	AATAAA	-23	NA	107620284	107649726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107626186_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.16	chr8	+	2175	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	74	junction_1	296.727140810796	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620285	107649720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621276_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.18	chr8	+	2219	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	315.204391774211	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620287	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633107_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.19	chr8	+	2238	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	313.548734001192	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620287	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645239_107645438_107648803_107648915_107649496
ES.33802.2	chr8	+	2700	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-142	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	313.548734001192	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620125	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107644939_107645438_107648803_107648915_107649496
ES.33802.20	chr8	+	5532	16	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	5	-2	intron_retention	FALSE	canonical	3	1046	junction_1	104.191277092769	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGACTAGACATTTTAAA	NA	False	NA	9	True	AATAAA	-14	NA	107620287	107649717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620345_107621222_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.21	chr8	+	8831	15	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	6	0	intron_retention	FALSE	canonical	3	1046	junction_1	101.99679866925	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620288	107649720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620345_107621222_107624884_107625073_107625159_107627477_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.22	chr8	+	3352	16	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	433.815301200356	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620291	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107624691_107624884_107625073_107625159_107626186_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.23	chr8	+	6305	16	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	15	0	intron_retention	FALSE	canonical	1	2	junction_13	318.660460190606	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620297	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107645102_107645251_107645438_107648803_107648915_107649496
ES.33802.25	chr8	+	3895	16	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	16	0	intron_retention	FALSE	canonical	3	1046	junction_1	104.211878188408	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620298	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.27	chr8	+	3379	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	406.921349126585	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACATTTTAAATTATTT	NA	False	NA	15	True	AATAAA	-20	NA	107620298	107649723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107626186_107627568_107630995_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.29	chr8	+	2431	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	313.862871878389	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACTAGACATTTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	107620315	107649718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620579_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.3	chr8	+	1973	16	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	417.417403672737	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620248	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107624691_107624884_107625073_107625159_107627477_107627568_107630995_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.30	chr8	+	3389	16	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	47	2	intron_retention	FALSE	canonical	3	68	junction_1	306.387089951403	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGACATTTTAAATTATT	NA	False	NA	14	True	AATAAA	-19	NA	107620329	107649722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620605_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107645438_107648803_107648915_107649496
ES.33802.31	chr8	+	2421	18	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	515.606680653915	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620334	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620605_107621222_107621384_107623820_107623934_107624691_107624884_107625073_107625159_107627477_107627568_107630995_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.32	chr8	+	2437	17	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	298.113122142837	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620336	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107620605_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.33	chr8	+	2176	16	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	938	-4	0	4	3prime_fragment	FALSE	canonical	3	1116	junction_3	91.8083995189014	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACATTTTAAATTATTTT	NA	False	NA	16	True	AATAAA	-21	NA	107621220	107649724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.34	chr8	+	3778	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	488.224553708383	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACTAGACATTTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	107621220	107649718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107636090_107636208_107636496_107637402_107637639_107638857_107638981_107639979_107640137_107642793_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.35	chr8	+	2266	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	419.369276227706	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107621228	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107644998_107645102_107645251_107645438_107648803_107648915_107649496
ES.33802.36	chr8	+	6559	11	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	6405	-1	intron_retention	FALSE	canonical	3	1133	junction_3	90.3628795468582	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACTAGACATTTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	107627625	107649718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.37	chr8	+	2613	8	ISM	ENSMUSG00000041438.9	ENSMUST00000212718.2	3113	15	13110	0	13110	0	3prime_fragment	FALSE	canonical	3	1133	junction_1	96.0709771630393	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107634330	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107645438_107648803_107648915_107649496
ES.33802.38	chr8	+	2640	9	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	14925	5	intron_retention	TRUE	canonical	0	0	junction_1	571.539136345885	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATTTTAAATTATTTTC	NA	False	NA	17	True	AATAAA	-22	NA	107636145	107649725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107636226_107636378_107636541_107637248_107637639_107638857_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.39	chr8	+	1004	7	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	18573	2	17635	-1	3prime_fragment	FALSE	canonical	3	1228	junction_1	68.3148348945283	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACTAGACATTTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	107638855	107649718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.4	chr8	+	2250	18	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	472.450586933095	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGACTAGACATTTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	107620250	107649718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107623820_107623934_107624691_107624884_107625073_107625159_107627477_107627568_107630989_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.6	chr8	+	2206	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	411.934759511443	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620258	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620341_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633069_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.8	chr8	+	2372	18	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	407.055346805962	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620258	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107621222_107621384_107623820_107623938_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33802.9	chr8	+	2413	18	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	407.788872709742	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107620259	107649719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107620345_107620788_107620948_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ES.33803.1	chr8	-	3362	3	NIC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	-29	1	intron_retention	FALSE	canonical	3	308	junction_1	3	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGTTTTTTTTAA	NA	False	NA	1	True	AATAAA	-45	NA	107620262	107610493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107613670_107613932_107613989_107620132
ES.33803.10	chr8	-	3174	3	NIC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	-2	1	intron_retention	FALSE	canonical	3	314	junction_2	18	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620235	107610524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107613159_107613551_107613989_107620132
ES.33803.11	chr8	-	2717	5	NNC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	23	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	141.212605669607	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCGCTCCATTT	NA	False	NA	-31	True	AATAAA	-13	NA	107620202	107610525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107610570_107610729_107613159_107613551_107613670_107613932_107613989_107620132
ES.33803.12	chr8	-	2931	3	NIC	ENSMUSG00000046691.15	novel	2890	4	NA	NA	-97	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	173.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCGCTCCATTT	NA	False	NA	-31	True	AATAAA	-13	NA	107619944	107610525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107613159_107613551_107613670_107619764
ES.33803.13	chr8	-	2840	5	NNC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.212605669607	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTGTCGCTCCATT	NA	False	NA	-32	True	AATAAA	-12	NA	107620233	107610526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107611388_107611454_107613159_107613551_107613670_107613932_107613989_107620132
ES.33803.14	chr8	-	5763	3	ISM	ENSMUSG00000046691.15	ENSMUST00000175940.2	2890	4	2902	1	2902	-1	3prime_fragment	FALSE	canonical	3	308	junction_2	21	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTGTCGCTCCATT	NA	False	NA	-32	True	AATAAA	-12	NA	107616945	107610526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_107613159_107613551_107613670_107613932
ES.33803.16	chr8	-	534	3	FSM	ENSMUSG00000117748.2	ENSMUST00000176437.9	369	3	35	-200	35	200	multi-exon	FALSE	canonical	3	66	junction_1	124	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCATCAGGCTCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	107620188	107612736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613932_107613989_107620132
ES.33803.17	chr8	-	4704	1	Intergenic	novelGene_27509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTACCATTTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	107619090	107614386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107614400_107619100
ES.33803.2	chr8	-	3128	4	NNC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	-464	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.037032641471	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	False	NA	-1	True	AATAAA	-43	NA	107620697	107610495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107613159_107613551_107613670_107613932_107613989_107620406
ES.33803.3	chr8	-	2966	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	-36	1	-28	-1	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	False	NA	-1	True	AATAAA	-43	NA	107620261	107610495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
ES.33803.4	chr8	-	2818	3	FSM	ENSMUSG00000117748.2	ENSMUST00000176437.9	369	3	-8	-2441	-6	26	multi-exon	FALSE	canonical	3	66	junction_1	124	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	False	NA	-1	True	AATAAA	-43	NA	107620231	107610495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613932_107613989_107620132
ES.33803.5	chr8	-	2755	2	FSM	ENSMUSG00000117748.2	ENSMUST00000169312.2	2730	2	1	-26	1	26	multi-exon	FALSE	canonical	2	13	junction_1	0	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	False	NA	-1	True	AATAAA	-43	NA	107620224	107610495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107620132
ES.33803.6	chr8	-	2867	3	FSM	ENSMUSG00000046691.15	ENSMUST00000176090.2	615	3	-85	-2167	1	-15	multi-exon	FALSE	canonical	2	13	junction_2	168.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTCTGTTTACTCTC	NA	False	NA	-15	True	AATAAA	-29	NA	107620232	107610509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613551_107613670_107620132
ES.33803.7	chr8	-	2874	3	NIC	ENSMUSG00000046691.15	novel	2890	4	NA	NA	-100	2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	24	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCGCTCCATTTTG	NA	False	NA	-29	True	AATAAA	-15	NA	107619947	107610523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107613159_107613932_107613989_107619764
ES.33803.8	chr8	-	2936	4	FSM	ENSMUSG00000046691.15	ENSMUST00000176515.2	694	4	-13	-2229	-13	1	multi-exon	FALSE	canonical	3	5	junction_2	154.848312874245	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107620246	107610524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613551_107613684_107613932_107613989_107620132
ES.33803.9	chr8	-	2988	4	FSM	ENSMUSG00000046691.15	ENSMUST00000175940.2	2890	4	-97	-1	-97	1	multi-exon	FALSE	canonical	3	18	junction_3	147.606082379947	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTCGCTCCATTTT	NA	False	NA	-30	True	AATAAA	-14	NA	107619944	107610524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107619764
ES.33804.1	chr8	-	2833	2	Antisense	novelGene_ENSMUSG00000041438.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAAAGAAAGAT	NA	False	NA	NA	False	AAGAAA	-33	NA	107641106	107638062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107640647_107640857
ES.33804.2	chr8	-	2821	2	Antisense	novelGene_ENSMUSG00000041438.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	107641105	107638094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107640647_107640836
ES.33804.3	chr8	-	1582	3	Antisense	novelGene_ENSMUSG00000041438.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	107640716	107638094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107638981_107639979_107640635_107640675
ES.33805.1	chr8	+	187	1	Intergenic	novelGene_27510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	107650519	107650706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107650500_107650700
ES.33806.1	chr8	-	1913	1	Intergenic	novelGene_27511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAAACTACAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	107652810	107650897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107650900_107652800
ES.33807.1	chr8	-	368	1	Intergenic	novelGene_27512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCTGGTGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	107653651	107653283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107653300_107653700
ES.33808.1	chr8	+	227	1	Intergenic	novelGene_27513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGTGATTTTTAAAAG	NA	False	NA	NA	False	AAAAAG	-34	NA	107661475	107661702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107661500_107661700
ES.33809.1	chr8	+	3632	8	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	-59	267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.2967728128433	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGGCATCTTTGATA	NA	False	NA	NA	False	AATATA	-25	NA	107662322	107740079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662639_107662743_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.10	chr8	+	4297	7	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	4	1012	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	45.3198509363048	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAAATAA	NA	False	NA	NA	False	AATAAA	-44	NA	107662386	107740824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662954_107707757_107707972_107718148_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.11	chr8	+	3915	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	10	6020	9	514	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCCTTGCCTAGAAAT	NA	False	NA	NA	False	ACTAAA	-17	NA	107662391	107740326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.12	chr8	+	4235	7	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	10	997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59.1929519077699	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCTGTTATCACCAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	107662392	107740809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662954_107707757_107707906_107718148_107718239_107723697_107723841_107728116_107728339_107736412_107736598_107737923
ES.33809.13	chr8	+	4263	7	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	11	1047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.8310103965571	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATCTGAACACGATTAC	NA	False	NA	NA	False	AATAAA	-26	NA	107662393	107740859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662954_107707757_107707910_107718148_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.14	chr8	+	4229	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	219	5497	-180	1037	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTATGTGGAATCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	107662600	107740849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.15	chr8	+	3995	7	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	-74	1043	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.9929288383718	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGAATCTGAACACGA	NA	False	NA	NA	False	AATAAA	-22	NA	107662706	107740855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662941_107707757_107707972_107718148_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.16	chr8	+	2170	1	Intergenic	novelGene_27514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAACATGGGAGCTG	NA	False	NA	NA	False	AAGAAA	-10	NA	107674060	107676230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107674100_107676200
ES.33809.17	chr8	+	2273	1	Intergenic	novelGene_27516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107697991	107700264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107698000_107700300
ES.33809.18	chr8	+	3852	6	ISM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	45375	5522	44976	1012	3prime_fragment	FALSE	canonical	3	100	junction_1	12.5123938556936	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAAATAA	NA	False	NA	NA	False	AATAAA	-44	NA	107707756	107740824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.2	chr8	+	4695	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-58	5308	-58	1226	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGTGTTTAATGCAAAT	NA	False	NA	NA	False	TTTAAA	-43	NA	107662323	107741038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.3	chr8	+	1250	2	FSM	ENSMUSG00000041308.7	ENSMUST00000212298.2	792	2	-430	-28	-31	28	multi-exon	FALSE	canonical	3	143	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTTCAAAGACCTAAAGA	NA	False	NA	NA	False	NA	NA	NA	107662350	107708404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757
ES.33809.4	chr8	+	1892	8	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	-30	-1444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.2967728128433	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGGGCTCTTCTTTTCT	NA	False	NA	3	True	CATAAA	-10	NA	107662351	107738368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662639_107662743_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.5	chr8	+	1998	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-30	7977	-30	-1443	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGGCTCTTCTTTTCTT	NA	False	NA	4	True	CATAAA	-11	NA	107662351	107738369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.6	chr8	+	3713	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-30	6262	-30	272	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATCTTTGATAATTCA	NA	False	NA	NA	False	AATATA	-30	NA	107662351	107740084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.7	chr8	+	4036	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	-9	5918	-9	616	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAGTACCAGGTTAAAT	NA	False	NA	NA	False	ACTAAA	-13	NA	107662372	107740428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.8	chr8	+	4448	7	NNC	ENSMUSG00000041308.7	novel	9945	7	NA	NA	-9	1041	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.0659228378977	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGGAATCTGAACAC	NA	False	NA	NA	False	AATAAA	-20	NA	107662372	107740853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662941_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ES.33809.9	chr8	+	2505	4	NNC	ENSMUSG00000041308.7	novel	3225	6	NA	NA	0	-14473	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	59.0047079100944	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107662382	107725339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107662954_107707757_107707972_107718027_107718106_107723697
ES.3381.1	chr10	-	2508	8	NNC	ENSMUSG00000020232.18	novel	1540	10	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_6	249.875887559551	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTGGCTTTGGGG	NA	False	NA	-4	True	AATAAA	-24	NA	81186261	81181877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184476_81184719_81186024_81186106
ES.3381.10	chr10	-	1772	8	NIC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	490	junction_6	52.8080853425971	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186258	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ES.3381.11	chr10	-	1544	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	-1	-3	-1	0	multi-exon	FALSE	canonical	3	76	junction_9	161.527966465926	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186261	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ES.3381.12	chr10	-	1669	9	NNC	ENSMUSG00000020232.18	novel	1540	10	NA	NA	16	0	intron_retention	FALSE	canonical	2	15	junction_6	236.977286622579	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186242	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182393_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184920_81185213_81185323_81185967_81186024_81186106
ES.3381.14	chr10	-	2377	8	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-15	0	intron_retention	FALSE	canonical	3	169	junction_7	150.739943652122	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186293	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81186024_81186240
ES.3381.15	chr10	-	2086	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	169	junction_8	141.668406852057	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186292	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81186024_81186240
ES.3381.17	chr10	-	1421	10	NNC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-12	1	intron_retention	FALSE	canonical	2	9	junction_1	207.318327431245	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTAATATTTGTGGCT	NA	False	NA	-10	True	AATAAA	-18	NA	81186290	81181883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182296_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ES.3381.18	chr10	-	1496	10	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-17	1	intron_retention	FALSE	canonical	3	11	junction_4	201.633208121291	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTAATATTTGTGGCT	NA	False	NA	-10	True	AATAAA	-18	NA	81186295	81181883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ES.3381.19	chr10	-	1836	7	NIC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	16	1	intron_retention	FALSE	canonical	3	490	junction_5	56.9748970063912	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTAATATTTGTGGCT	NA	False	NA	-10	True	AATAAA	-18	NA	81186242	81181883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ES.3381.2	chr10	-	1444	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	20	-1	-16	1	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAATATTTGTGGCTTTG	NA	False	NA	-7	True	AATAAA	-21	NA	81186294	81181880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ES.3381.20	chr10	-	2585	3	NIC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	98	0	intron_retention	FALSE	canonical	3	577	junction_1	21.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81184821	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81184451_81184719
ES.3381.22	chr10	-	1571	9	NNC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-8	0	intron_retention	FALSE	canonical	3	26	junction_1	213.409670586879	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186286	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182401_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ES.3381.23	chr10	-	1771	9	NIC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	76	junction_8	171.113220924042	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186202	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967_81186024_81186106
ES.3381.26	chr10	-	2490	7	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	169	junction_6	162.737774758454	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186262	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81186024_81186240
ES.3381.27	chr10	-	1851	9	NNC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_5	265.530130117092	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186292	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183869_81184329_81184451_81184719_81185323_81185845_81186024_81186240
ES.3381.28	chr10	-	1720	9	NNC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	218.33904254622	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186260	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184476_81184719_81185323_81185967_81186024_81186240
ES.3381.29	chr10	-	1103	7	NNC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_3	259.257058191715	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186242	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182393_81182527_81182674_81182863_81184357_81184451_81185251_81185323_81185967_81186024_81186106
ES.3381.3	chr10	-	2455	8	NIC	ENSMUSG00000020232.18	novel	1540	10	NA	NA	21	0	intron_retention	FALSE	canonical	3	76	junction_7	182.789049821629	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186237	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81186024_81186106
ES.3381.30	chr10	-	1947	7	NIC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	58	0	intron_retention	FALSE	canonical	3	11	junction_3	212.746131966404	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186093	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81185323_81185967
ES.3381.31	chr10	-	2572	8	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	169	junction_7	144.307211976988	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186305	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183867_81184329_81184451_81184719_81184924_81185213_81186024_81186240
ES.3381.32	chr10	-	2471	8	NNC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_7	264.424905431098	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186237	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182401_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185949_81186003
ES.3381.33	chr10	-	2248	7	NIC	ENSMUSG00000020232.18	novel	1321	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	490	junction_5	48.2067307425933	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	False	NA	-12	True	AATAAA	-16	NA	81186261	81181885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ES.3381.35	chr10	-	1525	10	NIC	ENSMUSG00000020232.18	novel	1540	10	NA	NA	10	-1	intron_retention	FALSE	canonical	3	11	junction_4	217.678889112914	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAAGTTAATATTTGTG	NA	False	NA	-13	True	AATAAA	-15	NA	81186193	81181886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183397_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ES.3381.36	chr10	-	3157	5	NIC	ENSMUSG00000020232.18	novel	2501	7	NA	NA	21	-2	intron_retention	FALSE	canonical	3	577	junction_1	16.6282891483159	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCAAGTTAATATTTGT	NA	False	NA	-14	True	AATAAA	-14	NA	81186237	81181887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183867_81184329_81184451_81184719
ES.3381.37	chr10	-	3509	4	NIC	ENSMUSG00000020232.18	novel	761	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	169	junction_3	204.441243936301	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCAAGTTAATATTTGT	NA	False	NA	-14	True	AATAAA	-14	NA	81186261	81181887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182891_81183269_81184451_81184719_81186024_81186240
ES.3381.38	chr10	-	1607	9	NNC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	2	junction_5	242.595728527936	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTCACTCAAGTTAATAT	NA	False	NA	-18	True	AATAAA	-10	NA	81186261	81181891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182312_81182401_81182527_81182674_81182891_81183269_81183343_81183819_81183865_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ES.3381.39	chr10	-	1502	8	NNC	ENSMUSG00000020232.18	novel	1502	9	NA	NA	0	-21	intron_retention	FALSE	canonical	0	0	junction_6	207.148669869182	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACAAATGGGTTTT	NA	False	NA	-33	True	TTTAAA	-10	NA	81186025	81181906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184978_81185213_81185323_81185967
ES.3381.4	chr10	-	2062	7	NIC	ENSMUSG00000020232.18	novel	1621	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	498	junction_6	44.522154285504	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186258	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967
ES.3381.5	chr10	-	1100	5	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	252.625216476899	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81184919	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81184329_81184451_81184719
ES.3381.6	chr10	-	1678	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	-54	-3	2	0	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186312	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ES.3381.7	chr10	-	1748	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	169	junction_8	141.437044298868	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186309	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81185323_81185967_81186024_81186240
ES.3381.8	chr10	-	2624	5	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	498	junction_4	45.1573637405905	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186261	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182891_81183269_81183867_81184329_81184451_81184719_81185323_81185967
ES.3381.9	chr10	-	2803	6	NIC	ENSMUSG00000020232.18	novel	1502	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	543	junction_2	24.6040647048409	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186025	81181881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183867_81184329_81184451_81184719
ES.33810.1	chr8	-	214	1	Intergenic	novelGene_27515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCCCCATGATTATATT	NA	False	NA	NA	False	AATAAA	-2	NA	107687072	107686858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107686900_107687100
ES.33811.1	chr8	+	4908	1	Genic_Genomic	ENSMUSG00000041308.7	novel	NA	NA	NA	NA	78665	7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGTGTTTTAAAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	107741445	107746353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_107741400_107746400
ES.33812.1	chr8	+	184	1	Intergenic	novelGene_27517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATAGATT	NA	False	NA	NA	False	NA	NA	NA	107748090	107748274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107748100_107748300
ES.33813.1	chr8	-	256	1	Intergenic	novelGene_27518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107754247	107753991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107754000_107754200
ES.33814.1	chr8	+	2178	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	4	-4	4	4	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGTCGTCTCATTTTT	NA	False	NA	21	True	AATAAA	-21	NA	107757857	107772391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.10	chr8	+	3465	9	NIC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	148	1	intron_retention	FALSE	canonical	3	173	junction_8	18.9732542016387	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107758001	107772388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.12	chr8	+	231	1	Intergenic	novelGene_27519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGATAATATTCTAGCTC	NA	False	NA	NA	False	NA	NA	NA	107760466	107760697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107760500_107760700
ES.33814.13	chr8	+	5592	7	NNC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	-3148	-296	intron_retention	FALSE	canonical	0	0	junction_1	72.4147007788397	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATGTTAAGGAGTGGG	NA	False	NA	5	True	AATAAA	-14	NA	107762502	107772091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107765622_107765699_107765842_107767505_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.14	chr8	+	1847	9	NNC	ENSMUSG00000031913.10	novel	571	4	NA	NA	-887	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.4820229460566	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGAGTCGTCTCATTT	NA	False	NA	19	True	AATAAA	-19	NA	107764763	107772389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107764961_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.15	chr8	+	3139	5	NIC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	124	2	intron_retention	FALSE	canonical	3	175	junction_2	15.9589316685046	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGAGTCGTCTCATTT	NA	False	NA	19	True	AATAAA	-19	NA	107765774	107772389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107765842_107767505_107768973_107769245_107769328_107769543_107769764_107771086
ES.33814.2	chr8	+	1901	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	36	241	36	-241	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCTACTTGTGAGC	NA	False	NA	60	True	NA	NA	NA	107757889	107772146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.3	chr8	+	3238	10	NIC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	98	-3	intron_retention	FALSE	canonical	3	173	junction_9	19.987650508239	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTACTGGAGTCGTCT	NA	False	NA	14	True	AATAAA	-14	NA	107757951	107772384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.5	chr8	+	3660	8	NIC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	99	-296	intron_retention	FALSE	canonical	3	182	junction_6	16.1485451420269	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATGTTAAGGAGTGGG	NA	False	NA	5	True	AATAAA	-14	NA	107757952	107772091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107769328_107769543_107769764_107771086
ES.33814.6	chr8	+	5272	8	NIC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	99	1	intron_retention	FALSE	canonical	3	173	junction_7	18.9811937002317	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	False	NA	18	True	AATAAA	-18	NA	107757952	107772388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107758124_107763268_107765622_107765721_107765842_107767505_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33814.7	chr8	+	1885	11	NNC	ENSMUSG00000031913.10	novel	2178	11	NA	NA	100	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	83.1012033607216	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTACTGGAGTCGTCTC	NA	False	NA	15	True	AATAAA	-15	NA	107757953	107772385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767557_107768823_107768888_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ES.33815.1	chr8	+	845	1	Antisense	novelGene_ENSMUSG00000031916.18_AS_novelGene_ENSMUSG00000078931.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGATGTTCACGTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	107774860	107775705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_107774900_107775700
ES.33816.1	chr8	-	4220	1	FSM	ENSMUSG00000083734.2	ENSMUST00000118457.2	627	1	-3201	-392	-3201	392	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AATAAA	-36	NA	107767939	107763719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107763700_107767900
ES.33817.1	chr8	-	4576	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-446	-2824	-446	1002	multi-exon	FALSE	canonical	3	275	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCTCACTGAAGTCTC	NA	False	NA	NA	False	CATAAA	-19	NA	107775692	107770327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107774692
ES.33817.10	chr8	-	1431	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-218	93	-218	-93	multi-exon	FALSE	canonical	3	275	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGTGGTGGCACACC	NA	False	NA	NA	False	NA	NA	NA	107775464	107773244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107774692
ES.33817.11	chr8	-	1044	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	1	261	1	-261	multi-exon	FALSE	canonical	3	275	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACAGGGTTTCTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	107775245	107773412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107774692
ES.33817.12	chr8	-	1156	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	-218	368	-218	-368	multi-exon	FALSE	canonical	3	275	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGTGGGCAGGCAAAC	NA	False	NA	0	True	ATTAAA	-32	NA	107775464	107773519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107774692
ES.33817.13	chr8	-	2341	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	8	605	8	-605	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCCATGGAGAGGAGT	NA	False	NA	-12	True	ATTAAA	-20	NA	107783308	107773531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.14	chr8	-	2314	6	NNC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	10	-607	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	49.4748420917136	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTTCCCATGGAGAGGA	NA	False	NA	-14	True	ATTAAA	-18	NA	107783306	107773533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107773904_107775437_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.15	chr8	-	3065	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	4	-2407	intron_retention	FALSE	canonical	3	128	junction_3	11.8415464455544	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTTCCCGACGATG	NA	False	NA	1	True	AATAAA	-21	NA	107783312	107775333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.16	chr8	-	2073	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	-14	2417	-14	-2411	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGCCTGCTGTTCCCGAC	NA	False	NA	-3	True	AATAAA	-17	NA	107783335	107775337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.17	chr8	-	1900	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	-13	-2414	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	63.2297398381489	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783334	107775340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107775763_107778844_107779673_107780653_107780862_107782892
ES.33817.18	chr8	-	3163	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	2	-2414	intron_retention	FALSE	canonical	0	0	junction_3	71.5588336033132	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783314	107775340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107775763_107776773_107776943_107778844_107780862_107782759
ES.33817.19	chr8	-	3951	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	2	-2414	intron_retention	FALSE	canonical	3	128	junction_3	7.87400787401181	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783314	107775340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107775763_107776773_107779673_107780653_107780862_107782892
ES.33817.2	chr8	-	1723	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	9	-426	9	426	multi-exon	FALSE	canonical	3	275	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGGACTGTGAGGTCT	NA	False	NA	NA	False	AGTAAA	-20	NA	107775237	107772725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107774692
ES.33817.20	chr8	-	3028	4	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	4	-2414	intron_retention	FALSE	canonical	3	128	junction_3	11.9536140513607	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTCGCCTGCTGTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	107783312	107775340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107775763_107776773_107776943_107778844_107780862_107782892
ES.33817.3	chr8	-	3170	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	-18	-198	-13	192	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGGAGGACTGTGAGG	NA	False	NA	NA	False	AGTAAA	-17	NA	107783334	107772728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.4	chr8	-	3819	6	NIC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	87.259154247563	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTAGCCACTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	107783315	107772915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107773904_107774692_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782759
ES.33817.5	chr8	-	2979	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	-14	-11	-9	5	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTAGCCACTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	107783330	107772915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.6	chr8	-	4488	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGGTAGCCACTTTG	NA	False	NA	NA	False	NA	NA	NA	107783331	107772918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.7	chr8	-	2955	6	NNC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	49.4748420917136	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783334	107772920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107773904_107775437_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.8	chr8	-	3755	6	NIC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	-71	-3	combination_of_known_splicesites	FALSE	canonical	3	128	junction_5	53.4093624751316	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTCTACTGGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	107783392	107772923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107773904_107774692_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33817.9	chr8	-	2616	6	NNC	ENSMUSG00000031916.18	novel	2954	6	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	49.4748420917136	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTGGCACACCTTT	NA	False	NA	NA	False	NA	NA	NA	107783316	107773241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107773904_107775437_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ES.33818.1	chr8	+	1149	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	1	1886	1	379	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGAGTGTTTTGTTGG	NA	False	NA	36	True	AATAAA	-30	NA	107783509	107785677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ES.33818.10	chr8	+	1739	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	362	intron_retention	FALSE	canonical	3	714	junction_3	58.8953874820997	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTTATTTCATATG	NA	False	NA	19	True	AATAAA	-13	NA	107783537	107785660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107783623_107783724_107783812_107783904_107784820_107785008
ES.33818.12	chr8	+	2043	2	NIC	ENSMUSG00000031917.13	novel	606	4	NA	NA	2	377	intron_retention	FALSE	canonical	3	802	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGAGTGTTTTGTT	NA	False	NA	34	True	AATAAA	-28	NA	107783539	107785675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107783812_107783904
ES.33818.15	chr8	+	873	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	37	2126	8	139	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGCGTCGTCTTTGT	NA	False	NA	7	True	AGTAAA	-17	NA	107783545	107785437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ES.33818.16	chr8	+	1542	2	ISM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	1192	1132	1163	-1132	3prime_fragment	FALSE	canonical	3	714	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGCATGGGATAGAGT	NA	False	NA	NA	False	NA	NA	NA	107784700	107786431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_107784820_107785008
ES.33818.2	chr8	+	1938	6	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	320.893377931051	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTCTCCGTATCA	NA	False	NA	14	True	ATTAAA	-15	NA	107783509	107787558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008_107785997_107787088
ES.33818.3	chr8	+	1236	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	5	377	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGAGTGTTTTGTT	NA	False	NA	34	True	AATAAA	-28	NA	107783513	107785675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
ES.33818.4	chr8	+	1341	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	9	1686	9	579	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGCTATTTTTCTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	107783517	107785877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ES.33818.5	chr8	+	2847	3	NNC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_2	428.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	False	NA	19	True	ATTAAA	-20	NA	107783522	107787563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107783623_107783724_107785997_107787088
ES.33818.6	chr8	+	3020	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	16	0	-8	0	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	False	NA	19	True	ATTAAA	-20	NA	107783524	107787563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ES.33818.7	chr8	+	680	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	17	2339	-7	-74	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGGTTCTTATCAACA	NA	False	NA	33	True	ATTAAA	-23	NA	107783525	107785224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ES.33819.1	chr8	-	6472	9	NIC	ENSMUSG00000031921.18	novel	2666	10	NA	NA	127	0	intron_retention	FALSE	canonical	3	17	junction_3	7.70450355311749	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTAGCTGGTTCTTG	NA	False	NA	0	True	ATTAAA	-17	NA	107823019	107796031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107797198_107798506_107798548_107799191_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ES.33819.11	chr8	-	1538	8	NNC	ENSMUSG00000031921.18	novel	2666	10	NA	NA	-11	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.3527000944073	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAAGTTGGGCCTCAT	NA	False	NA	-6	True	NA	NA	NA	107823157	107802944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753_107822887_107822998
ES.33819.12	chr8	-	3096	3	Intergenic	novelGene_27520	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTAT	NA	False	NA	NA	False	NA	NA	NA	107818943	107815599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107815988_107816045_107816615_107816804
ES.33819.2	chr8	-	2640	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	28	-1	-3	1	multi-exon	FALSE	canonical	3	17	junction_3	7.27247474309048	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCTCTAGCTGGTTCTT	NA	False	NA	-1	True	ATTAAA	-16	NA	107823149	107796032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ES.33819.3	chr8	-	2487	10	NNC	ENSMUSG00000031921.18	novel	2667	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	11.6216061022159	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	107823175	107796033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_107797198_107798506_107798548_107799191_107799278_107803419_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ES.33819.5	chr8	-	1164	3	ISM	ENSMUSG00000031921.18	ENSMUST00000142616.8	2140	11	23557	115	7242	-115	3prime_fragment	FALSE	canonical	3	30	junction_2	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	107799265	107796148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_107797198_107798506_107798548_107799191
ES.33819.6	chr8	-	3554	3	ISM	ENSMUSG00000031921.18	ENSMUST00000068388.15	1915	11	14847	4191	-226	1398	internal_fragment	FALSE	canonical	3	17	junction_1	12	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAATGTCTGTCACTT	NA	False	NA	NA	False	AGTAAA	-18	NA	107808299	107800750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_107803629_107806000_107806102_107807724
ES.33819.7	chr8	-	2547	8	NIC	ENSMUSG00000031921.18	novel	2140	11	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	15.0400825008593	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGTCCTTGCGTGAT	NA	False	NA	0	True	NA	NA	NA	107823156	107802149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107803632_107806000_107806102_107806326_107806427_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ES.33819.8	chr8	-	431	1	ISM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	19982	618	3310	184	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGCCTGGGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	107803197	107802766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_107802800_107803200
ES.33819.9	chr8	-	919	3	NIC	ENSMUSG00000031921.18	novel	2471	7	NA	NA	94	50	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	13	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCACTTAGCTTTATA	NA	False	NA	0	True	NA	NA	NA	107806413	107802900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_107803632_107806000_107806102_107806326
ES.3382.1	chr10	+	3714	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	-1359	-1	intron_retention	FALSE	canonical	0	0	junction_1	101.625674796174	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGTCAACCCTTTACA	8000	False	NA	29	True	AATAAA	-20	NA	81191965	81202058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81192111_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198771_81198862_81199386_81199518_81199603
ES.3382.10	chr10	+	3799	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	7	junction_1	76.1253028131584	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCAGTCAACCCTTTA	872	False	NA	27	True	AATAAA	-18	NA	81193374	81202056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81196034_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.11	chr10	+	4392	9	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	-11	-10	intron_retention	FALSE	canonical	0	0	junction_2	79.0726525102073	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTCATAGCTCAGTCAA	872	False	NA	20	True	AATAAA	-11	NA	81193374	81202049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196976_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81199518_81199603
ES.3382.13	chr10	+	3962	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_8	78.6380990187578	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	883	False	NA	28	True	AATAAA	-19	NA	81193385	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199332_81199518_81199603
ES.3382.14	chr10	+	4514	8	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	0	5	intron_retention	FALSE	canonical	3	201	junction_7	25.3755466413423	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACCCTTTACAGTCTGT	883	False	NA	35	True	AATAAA	-26	NA	81193385	81202064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81199518_81199603
ES.3382.15	chr10	+	4433	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	201	junction_8	23.7404586097236	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	883	False	NA	28	True	AATAAA	-19	NA	81193385	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81199518_81199603
ES.3382.17	chr10	+	4584	7	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	63	9	2	-9	intron_retention	FALSE	canonical	3	217	junction_4	21.4430771009096	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCATAGCTCAGTCAAC	885	False	NA	21	True	AATAAA	-12	NA	81193387	81202050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521
ES.3382.18	chr10	+	3832	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_3	79.3162135278473	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCAGTCAACCCTTTA	889	False	NA	27	True	AATAAA	-18	NA	81193391	81202056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197216_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.2	chr10	+	4015	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	-39	-5	-39	5	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACCCTTTACAGTCTGT	783	False	NA	35	True	AATAAA	-26	NA	81193285	81202064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.21	chr10	+	3975	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	13	4	intron_retention	FALSE	canonical	3	201	junction_8	23.9791576165636	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAACCCTTTACAGTCTG	896	False	NA	34	True	AATAAA	-25	NA	81193398	81202063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198862_81199386_81199518_81199603
ES.3382.22	chr10	+	3702	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	15	-7	intron_retention	FALSE	canonical	1	4	junction_3	82.8477519308762	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATAGCTCAGTCAACCC	898	False	NA	23	True	AATAAA	-14	NA	81193400	81202052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.24	chr10	+	3879	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	19	-3	intron_retention	FALSE	non_canonical	0	0	junction_9	79.296910406396	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCAGTCAACCCTTTA	902	False	NA	27	True	AATAAA	-18	NA	81193404	81202056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199509_81199603
ES.3382.26	chr10	+	4380	8	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	19	-3	intron_retention	FALSE	canonical	3	7	junction_1	84.9936372168349	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCAGTCAACCCTTTA	902	False	NA	27	True	AATAAA	-18	NA	81193404	81202056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81196034_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766
ES.3382.27	chr10	+	4313	7	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	20	-2	intron_retention	FALSE	canonical	1	4	junction_3	94.3776397717642	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	903	False	NA	28	True	AATAAA	-19	NA	81193405	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197858_81197952_81198038_81198132_81198521_81198693_81198766
ES.3382.29	chr10	+	4203	7	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	211	-2	intron_retention	FALSE	canonical	0	0	junction_5	92.7411271587027	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	1094	False	NA	28	True	AATAAA	-19	NA	81193596	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198521_81199518_81199603
ES.3382.30	chr10	+	3409	8	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	3561	2	3500	-2	3prime_fragment	FALSE	canonical	3	201	junction_7	16.8934234275366	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	1804	False	NA	28	True	AATAAA	-19	NA	81196885	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.4	chr10	+	2200	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	22	1749	22	-1749	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGAGTGACCCACGTG	844	False	NA	NA	False	NA	NA	NA	81193346	81200310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ES.3382.5	chr10	+	3811	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	22	-7	intron_retention	FALSE	canonical	0	0	junction_8	83.2822760255746	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATAGCTCAGTCAACCC	844	False	NA	23	True	AATAAA	-14	NA	81193346	81202052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199603
ES.3382.7	chr10	+	4548	8	ISM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	32	2	-29	-2	intron_retention	FALSE	canonical	3	217	junction_4	19.9345869057285	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	854	False	NA	28	True	AATAAA	-19	NA	81193356	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766
ES.3382.8	chr10	+	4052	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	-25	-2	intron_retention	FALSE	canonical	1	2	junction_8	78.0357626150573	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTCAACCCTTTAC	858	False	NA	28	True	AATAAA	-19	NA	81193360	81202057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199267_81199518_81199603
ES.3382.9	chr10	+	2056	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	-12	-1869	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	79.0411675827192	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCTGGCCTAGCCCTC	871	False	NA	NA	False	NA	NA	NA	81193373	81200190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198763_81198862_81199386_81199518_81199603
ES.33820.1	chr8	-	1850	1	Intergenic	novelGene_27521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATTTTTAACATTTC	NA	False	NA	NA	False	NA	NA	NA	107835875	107834025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107834000_107835900
ES.33821.1	chr8	+	1214	1	Intergenic	novelGene_27523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAAATTGCTACTTT	NA	False	NA	NA	False	NA	NA	NA	107841103	107842317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107841100_107842300
ES.33822.1	chr8	-	3397	1	Intergenic	novelGene_27522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAATATAATACTCA	NA	False	NA	NA	False	NA	NA	NA	107841636	107838239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107838200_107841600
ES.33823.1	chr8	+	2115	2	Intergenic	novelGene_27524	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAATGCAATAA	3785	False	NA	NA	False	NA	NA	NA	107850631	107853377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107850748_107851378
ES.33824.1	chr8	-	176	1	Intergenic	novelGene_27525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATTTTGACCAAAA	NA	False	NA	NA	False	NA	NA	NA	107870801	107870625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107870600_107870800
ES.33825.1	chr8	+	3212	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	-373	1477	-373	4	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTTTTTCTATTTCACA	NA	False	NA	59	True	AGTAAA	-15	NA	107876898	107912626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.11	chr8	+	1043	5	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	9	-1892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	639.975585471821	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTAATTTTGTCATTCA	NA	False	NA	35	True	AGTAAA	-17	NA	107877280	107910730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107896913_107897053_107906045_107906075_107910209
ES.33825.12	chr8	+	927	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	10	-1885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	681.425140585686	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTCATTCATCATAAG	NA	False	NA	42	True	AGTAAA	-24	NA	107877281	107910737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897053_107910193
ES.33825.13	chr8	+	778	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	12	3526	12	-2045	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGAGTTCCTATGTTGT	NA	False	NA	NA	False	NA	NA	NA	107877283	107910577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.14	chr8	+	4264	4	NIC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	12	-11	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	656.441078002351	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCTGACTACGGTTG	NA	False	NA	6	True	AATAAA	-17	NA	107877283	107914092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_107877506_107896442_107896572_107897022_107897053_107910209
ES.33825.15	chr8	+	2799	6	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	13	17441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	587.750423224008	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTATTCAAAGCAGGGT	NA	False	NA	NA	False	NA	NA	NA	107877284	107931544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209_107912580_107931524
ES.33825.16	chr8	+	2251	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	20	2045	20	-564	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGATATTTTAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	107877291	107912058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.19	chr8	+	4229	5	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	43	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	638.782190969661	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGACTACGGTTGC	NA	False	NA	7	True	AATAAA	-18	NA	107877314	107914093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877472_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.2	chr8	+	4347	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	-30	-1	-30	1	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTTGCTTTTTTTTTTT	NA	False	NA	18	True	AATAAA	-29	NA	107877241	107914104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.21	chr8	+	913	5	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	45	-1890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	637.407003020833	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTTGTCATTCATC	NA	False	NA	37	True	AGTAAA	-19	NA	107877316	107910732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897053_107906032_107906075_107910209
ES.33825.22	chr8	+	606	6	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	45	11583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	708.153203763141	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTGTTTTCTTTTTT	NA	False	NA	NA	False	AATGAA	-12	NA	107877316	107925686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897053_107920682_107920753_107922390_107922506_107925613
ES.33825.23	chr8	+	2973	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	45	1298	45	183	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCTTTTTTTTTTTTAA	NA	False	NA	NA	False	TATAAA	-3	NA	107877316	107912805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.24	chr8	+	959	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	272	-1892	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	679.293914459877	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTAATTTTGTCATTCA	NA	False	NA	35	True	AGTAAA	-17	NA	107877543	107910730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877805_107896442_107896572_107897022_107897071_107910209
ES.33825.25	chr8	+	4166	5	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	273	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	638.782190969661	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGACTACGGTTGC	NA	False	NA	7	True	AATAAA	-18	NA	107877544	107914093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877639_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.26	chr8	+	348	1	Intergenic	novelGene_27531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTTTTATTTATATA	NA	False	NA	NA	False	NA	NA	NA	107923360	107923708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107923400_107923700
ES.33825.27	chr8	+	193	1	Intergenic	novelGene_27532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTATCATTCACAGATAT	NA	False	NA	NA	False	NA	NA	NA	107923361	107923554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107923400_107923600
ES.33825.3	chr8	+	1012	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	-30	3334	-30	-1853	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGTGTGTATCTTAT	NA	False	NA	74	True	NA	NA	NA	107877241	107910769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.4	chr8	+	1118	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	-20	3218	-20	-1737	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTCTGAGTCAC	NA	False	NA	NA	False	NA	NA	NA	107877251	107910885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.5	chr8	+	4302	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	681.425140585686	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGACTACGGTTGC	NA	False	NA	7	True	AATAAA	-18	NA	107877262	107914093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897060_107910200
ES.33825.6	chr8	+	4304	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	681.425140585686	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACGGTTGCTTTTTTTT	NA	False	NA	15	True	AATAAA	-26	NA	107877271	107914101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897053_107910190
ES.33825.7	chr8	+	932	4	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	3	-1890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	681.425140585686	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTTGTCATTCATC	NA	False	NA	37	True	AGTAAA	-19	NA	107877274	107910732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877506_107896442_107896572_107897022_107897060_107910197
ES.33825.8	chr8	+	4239	6	NNC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	587.750423224007	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTTGCTTTTTTTTTTT	NA	False	NA	18	True	AATAAA	-29	NA	107877275	107914104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_107877321_107877394_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33825.9	chr8	+	1695	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	6	2615	6	-1134	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCCGGCATGCCCCTTC	NA	False	NA	NA	False	AGTAAA	-21	NA	107877277	107911488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ES.33826.1	chr8	-	6626	1	Intergenic	novelGene_27526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACCTCCTTCTTCATGA	NA	False	NA	NA	False	NA	NA	NA	107886972	107880346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107880300_107887000
ES.33826.2	chr8	-	5969	1	Intergenic	novelGene_27527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGCC	NA	False	NA	NA	False	NA	NA	NA	107886969	107881000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107881000_107887000
ES.33826.3	chr8	-	2747	1	Intergenic	novelGene_27528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTGAGTCACCCTGC	NA	False	NA	NA	False	NA	NA	NA	107886969	107884222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107884200_107887000
ES.33827.1	chr8	-	168	1	Intergenic	novelGene_27529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	107898080	107897912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107897900_107898100
ES.33828.1	chr8	-	1366	1	Antisense	novelGene_ENSMUSG00000031924.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTCAA	NA	False	NA	NA	False	NA	NA	NA	107911098	107909732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_107909700_107911100
ES.33829.1	chr8	-	198	1	Intergenic	novelGene_27530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGCCATAAAGCAATG	NA	False	NA	NA	False	NA	NA	NA	107919935	107919737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107919700_107919900
ES.3383.1	chr10	-	5252	15	Fusion	ENSMUSG00000020234.11_ENSMUSG00000020235.17	novel	3057	14	NA	NA	-96	-2	intron_retention	FALSE	canonical	0	0	junction_1	194.951799380341	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCGTGTGTCCGTGTCCC	NA	False	NA	NA	False	GATAAA	-12	NA	81214446	81199882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_81200502_81200575_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.10	chr10	-	2473	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	29	225	intron_retention	FALSE	canonical	3	644	junction_8	51.2027560022136	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214256	81202706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.12	chr10	-	2442	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-11	224	intron_retention	FALSE	canonical	3	644	junction_8	53.2417834036389	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214308	81202707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.13	chr10	-	2374	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	15	224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	202.223176262642	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214335	81202707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205259_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.14	chr10	-	2842	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-12	224	intron_retention	FALSE	canonical	3	644	junction_7	52.7650335007055	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214309	81202707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205275_81205804_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.16	chr10	-	1795	12	ISM	ENSMUSG00000020235.17	ENSMUST00000020457.14	1956	14	7324	-224	286	224	3prime_fragment	FALSE	canonical	3	18	junction_4	210.840427694532	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81206961	81202707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204431_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928
ES.3383.17	chr10	-	2811	11	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	30	224	intron_retention	FALSE	canonical	0	0	junction_3	226.379769414142	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214255	81202707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81205093_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.18	chr10	-	2331	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	26	222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	202.147172352078	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTCGGTCTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	81214259	81202709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206235_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.19	chr10	-	2272	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	0	222	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	207.758005595185	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTCGGTCTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	81214285	81202709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.2	chr10	-	2492	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	71	494	6	382	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCACCTGCTGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	81214279	81202549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.21	chr10	-	4015	9	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	2	221	intron_retention	FALSE	canonical	3	651	junction_4	49.5604113683492	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCGGTCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	81214283	81202710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81205093_81205171_81205871_81206031_81206216_81206298_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.24	chr10	-	2594	10	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	1	221	intron_retention	FALSE	canonical	0	0	junction_1	307.213080032752	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCGGTCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	81214349	81202710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203964_81204070_81204356_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81214103
ES.3383.25	chr10	-	2407	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	18	218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	201.719472441632	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGGTCGGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	81214332	81202713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206685_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.26	chr10	-	3726	9	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-7	218	intron_retention	FALSE	canonical	3	651	junction_4	49.1488491726917	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGGTCGGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	81214304	81202713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203568_81203964_81205093_81205171_81205871_81206031_81206216_81206298_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.27	chr10	-	3037	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-29	218	intron_retention	FALSE	canonical	3	644	junction_7	54.5531812709109	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGGTCGGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	81214379	81202713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.28	chr10	-	2915	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	14	218	intron_retention	FALSE	canonical	3	644	junction_8	53.2960807397901	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGGGGTCGGTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	81214336	81202713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.29	chr10	-	2647	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	2	216	intron_retention	FALSE	canonical	3	644	junction_8	53.2417834036389	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGGGGTCGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	81214283	81202715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.3	chr10	-	2462	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	-14	609	-14	267	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGGAGAAGCCCCTGG	NA	False	NA	NA	False	NA	NA	NA	81214364	81202664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.30	chr10	-	2410	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	12	216	intron_retention	FALSE	canonical	3	644	junction_8	53.4522112628551	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGGGGTCGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	81214273	81202715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.31	chr10	-	2696	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	32	216	intron_retention	FALSE	canonical	3	644	junction_7	54.4899717819104	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGGGGTCGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	81214253	81202715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.32	chr10	-	3457	10	NIC	ENSMUSG00000020235.17	novel	2780	11	NA	NA	-26	216	intron_retention	FALSE	canonical	3	644	junction_5	56.2450546522937	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGGGGTCGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	81214323	81202715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.33	chr10	-	3397	10	NIC	ENSMUSG00000020235.17	novel	2780	11	NA	NA	1	4	intron_retention	FALSE	canonical	3	644	junction_5	54.7826231798837	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGTGTGCGCCTT	NA	False	NA	NA	False	NA	NA	NA	81214349	81202927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.34	chr10	-	2293	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	-109	873	-109	3	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTGTGTGTGCGCCT	NA	False	NA	NA	False	NA	NA	NA	81214459	81202928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.35	chr10	-	2460	13	NIC	ENSMUSG00000020235.17	novel	1956	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	644	junction_8	53.2417834036389	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTGTCTGTGTGTGCG	NA	False	NA	NA	False	NA	NA	NA	81214312	81202931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.36	chr10	-	1925	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	-14	1146	-14	4	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGAGCCAGTGTCTGGG	NA	False	NA	-6	True	ATTAAA	-15	NA	81214364	81203201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.37	chr10	-	3014	11	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-24	2	intron_retention	FALSE	canonical	3	644	junction_6	53.0479971346704	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGAGCCAGTGTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	81214321	81203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.38	chr10	-	2684	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-11	2	intron_retention	FALSE	canonical	3	644	junction_7	51.4039262738133	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGAGCCAGTGTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	81214308	81203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204591_81204907_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.39	chr10	-	2236	13	NIC	ENSMUSG00000020235.17	novel	1956	14	NA	NA	-10	2	intron_retention	FALSE	canonical	3	18	junction_4	205.567692959981	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGAGCCAGTGTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	81214307	81203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204431_81204907_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.40	chr10	-	2421	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	18	2	intron_retention	FALSE	canonical	3	644	junction_8	53.2960807397901	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGAGCCAGTGTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	81214332	81203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.41	chr10	-	1952	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	201.441286026416	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGAGCCAGTGTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	81214357	81203203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207325_81214103
ES.3383.44	chr10	-	3150	9	NIC	ENSMUSG00000020235.17	novel	2780	11	NA	NA	-4	1	intron_retention	FALSE	canonical	3	644	junction_4	57.3100122142719	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGGAGCCAGTGTCT	NA	False	NA	-9	True	ATTAAA	-12	NA	81214289	81203204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203568_81203964_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.45	chr10	-	3135	10	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-17	0	intron_retention	FALSE	canonical	3	644	junction_6	55.912630256698	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGGAGCCAGTGTC	NA	False	NA	-10	True	ATTAAA	-11	NA	81214314	81203205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.46	chr10	-	1821	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	202.223176262642	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGGAGCCAGTGTC	NA	False	NA	-10	True	ATTAAA	-11	NA	81214306	81203205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205233_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.47	chr10	-	2754	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	644	junction_7	54.5531812709109	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGGAGCCAGTGTC	NA	False	NA	-10	True	ATTAAA	-11	NA	81214350	81203205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.5	chr10	-	2762	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-1	226	intron_retention	FALSE	canonical	3	644	junction_7	55.0147989105982	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCTCCTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	81214298	81202705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203568_81203964_81204070_81204356_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.6	chr10	-	2226	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	5	225	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	206.906363013697	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214280	81202706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81214103
ES.3383.7	chr10	-	3259	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	-6	225	intron_retention	FALSE	canonical	3	644	junction_7	54.5531812709109	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214356	81202706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.8	chr10	-	3343	11	FSM	ENSMUSG00000020235.17	ENSMUST00000138343.2	2780	11	-64	-499	-11	225	multi-exon	FALSE	canonical	3	644	junction_6	55.7831515782319	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214361	81202706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ES.3383.9	chr10	-	2348	14	NNC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	29	225	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	201.441286026416	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214256	81202706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207325_81214103
ES.33830.1	chr8	-	184	1	Intergenic	novelGene_27533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAATCAATTAAA	NA	False	NA	NA	False	NA	NA	NA	107951595	107951411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_107951400_107951600
ES.33831.1	chr8	-	545	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	-43	-46	-43	46	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCTA	NA	False	NA	-23	True	AATAAA	-18	NA	107989923	107989378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_107989400_107989900
ES.33832.1	chr8	+	2655	1	Intergenic	novelGene_27534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-32	NA	107994388	107997043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_107994400_107997000
ES.33833.1	chr8	+	4615	3	FSM	ENSMUSG00000003847.17	ENSMUST00000151582.2	5152	3	-37	574	-37	-574	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTCTTTATCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	108020064	108055365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108020531_108022212_108022267_108051270
ES.33833.10	chr8	+	12498	12	FSM	ENSMUSG00000003847.17	ENSMUST00000077440.13	12773	12	274	1	168	-1	multi-exon	FALSE	canonical	0	0	junction_7	1.8227216050694	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGTGGCAATCTTTTT	NA	False	NA	11	True	AATAAA	-22	NA	108065712	108106147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ES.33833.11	chr8	+	4497	3	ISM	ENSMUSG00000003847.17	ENSMUST00000147588.2	5481	7	11470	380	11470	-380	3prime_fragment	FALSE	canonical	1	2	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGGTAAATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	108093921	108099782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108096184_108097049_108097292_108097789
ES.33833.2	chr8	+	7503	15	NIC	ENSMUSG00000003847.17	novel	13443	16	NA	NA	-20	84	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	1.64130361329658	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCCTCAAGATCTCCT	NA	False	NA	NA	False	TATAAA	-16	NA	108020081	108100246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108020531_108051270_108051397_108064926_108064989_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088378_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ES.33833.3	chr8	+	7400	15	NIC	ENSMUSG00000003847.17	novel	13380	15	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	1.57790871674104	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTTTGTAATTTTAATA	NA	False	NA	NA	False	TATAAA	-16	NA	108020101	108100171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108020531_108022212_108022267_108051270_108051397_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088378_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ES.33833.4	chr8	+	8256	17	NNC	ENSMUSG00000003847.17	novel	13443	16	NA	NA	2	943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.6583123951777	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGTTACATTTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	108020103	108101105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108020531_108022212_108022267_108051270_108051397_108064926_108064989_108065440_108065581_108065721_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ES.33833.5	chr8	+	8397	16	FSM	ENSMUSG00000003847.17	ENSMUST00000133026.8	13443	16	2	5044	2	943	multi-exon	FALSE	canonical	0	0	junction_11	1.62754074876449	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGTTACATTTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	108020103	108101105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108020531_108022212_108022267_108051270_108051397_108064926_108064989_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ES.33833.6	chr8	+	4519	2	FSM	ENSMUSG00000003847.17	ENSMUST00000149972.2	3743	2	-34	-742	5	-574	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTCTTTATCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	108020106	108055365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108020531_108051270
ES.33833.7	chr8	+	9525	8	NIC	ENSMUSG00000003847.17	novel	13443	16	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.16057691494799	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGGGTGGCAATCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	108020140	108106146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108020531_108022212_108022267_108051270_108051397_108064926_108064989_108065440_108065581_108096029_108096184_108097049_108097292_108097789
ES.33833.8	chr8	+	4151	1	Genic_Genomic	ENSMUSG00000003847.17	novel	NA	NA	NA	NA	-11581	1770	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGATAGTTTTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	108053558	108057709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_108053600_108057700
ES.33833.9	chr8	+	14000	12	NIC	ENSMUSG00000003847.17	novel	13443	16	NA	NA	-665	2	intron_retention	FALSE	canonical	0	0	junction_8	1.11340442853781	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGTGGCAATC	NA	False	NA	6	True	AATAAA	-17	NA	108064474	108106142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108064989_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108096184_108097049_108097292_108097789
ES.33834.1	chr8	+	184	1	Intergenic	novelGene_27535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAACACACCCCCATTA	NA	False	NA	4	True	NA	NA	NA	108122387	108122571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108122400_108122600
ES.33835.1	chr8	+	199	1	Intergenic	novelGene_27536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAGGAAGGG	NA	False	NA	NA	False	NA	NA	NA	108126717	108126916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108126700_108126900
ES.33836.1	chr8	-	2214	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	3	-664	3	664	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGGATATCATGTA	NA	False	NA	NA	False	NA	NA	NA	108129835	108114192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ES.33836.10	chr8	-	2389	8	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	448	junction_3	29.242825737997	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151669	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.11	chr8	-	2592	1	NIC	ENSMUSG00000003848.15	novel	2137	6	NA	NA	3586	0	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108141712	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139100_108141700
ES.33836.12	chr8	-	1655	9	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.197875688163	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151693	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108142883_108143625_108143709_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.13	chr8	-	2646	7	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	448	junction_3	31.1394712008195	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151669	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108143724_108144687_108144859_108144945_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.14	chr8	-	1647	9	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	161.008540146167	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151684	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
ES.33836.15	chr8	-	3309	8	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	3	0	intron_retention	TRUE	non_canonical	0	0	junction_2	171.247404270511	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151670	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108143953_108143997_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.16	chr8	-	1537	8	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	169.052702807529	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151693	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151597
ES.33836.17	chr8	-	3394	7	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	182.256001272935	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151665	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108143960_108144009_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369
ES.33836.2	chr8	-	1817	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	2	-266	2	266	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATCCTAAGTGCCA	NA	False	NA	NA	False	NA	NA	NA	108129836	108114590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ES.33836.20	chr8	-	1608	9	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	158.905583209024	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTTTTTTTGTTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	108151665	108139121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144720_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.22	chr8	-	3346	7	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	448	junction_2	31.2765442819731	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATTTTTTTTGTTTTA	NA	False	NA	-6	True	AATAAA	-11	NA	108151665	108139123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.23	chr8	-	1564	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	-10	104	-8	-104	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTCGTATCCTTGGTG	NA	False	NA	1	True	AATAAA	-26	NA	108151691	108139224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.24	chr8	-	1526	9	NIC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	0	-110	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	161.008540146167	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAAGTTCTCGTATCC	NA	False	NA	-5	True	AATAAA	-20	NA	108151673	108139230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
ES.33836.25	chr8	-	1532	9	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	0	-113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.197875688163	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTAAGTTCTCGTA	NA	False	NA	-8	True	AATAAA	-17	NA	108151683	108139233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108142883_108143625_108143709_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.3	chr8	-	4711	4	NIC	ENSMUSG00000003849.9	novel	1553	6	NA	NA	3	266	intron_retention	FALSE	canonical	3	129	junction_3	10.8012344973464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATCCTAAGTGCCA	NA	False	NA	NA	False	NA	NA	NA	108129835	108114590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108118868_108119272_108119404_108119479_108119645_108129697
ES.33836.4	chr8	-	1553	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGCGCATGCCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	108129838	108114856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ES.33836.5	chr8	-	1686	7	NNC	ENSMUSG00000003849.9	novel	1553	6	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	63.9426826671095	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGCGCATGCCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	108129894	108114856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108115757_108116314_108116392_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ES.33836.6	chr8	-	2651	5	NNC	ENSMUSG00000003849.9	novel	1553	6	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_2	60.4607310574393	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGGTGGCGCATGCCT	NA	False	NA	-4	True	AATAAA	-16	NA	108129835	108114858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108115757_108117676_108118868_108119144_108119404_108119479_108119645_108129697
ES.33836.7	chr8	-	4784	14	Fusion	ENSMUSG00000003848.15_ENSMUSG00000003849.9	novel	1658	9	NA	NA	-8	-67	intron_retention	FALSE	canonical	0	0	junction_4	212.763807706627	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTCCGTCTCATTCTTT	NA	False	NA	-38	True	TTTAAA	-3	NA	108151691	108114923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119645_108137249_108137411_108137873_108138083_108138538_108139816_108142737_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.8	chr8	-	1673	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	-15	0	-13	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151696	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ES.33836.9	chr8	-	2640	5	NNC	ENSMUSG00000003848.15	novel	1658	9	NA	NA	-1	0	intron_retention	FALSE	canonical	2	2	junction_2	215.424000519905	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151674	108139120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108139816_108142737_108144342_108148113_108148245_108151369_108151503_108151597
ES.33837.1	chr8	+	175	1	Intergenic	novelGene_27537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	108161367	108161542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108161400_108161500
ES.33838.10	chr8	+	5995	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	9	-1690	9	1690	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACACAAAAGTTTCATAGT	NA	False	NA	NA	False	GATAAA	-22	NA	108163005	108286917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.11	chr8	+	4994	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	10	-690	-9	690	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCATTTTTGACATTT	NA	False	NA	NA	False	AATAAA	-21	NA	108163006	108285917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.12	chr8	+	4293	10	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	10	14765	-9	-2322	5prime_fragment	FALSE	canonical	3	576	junction_9	40.1275743376325	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTCTTATCAGTGACC	NA	False	NA	NA	False	NA	NA	NA	108163006	108270462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255
ES.33838.13	chr8	+	3100	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	186.108316728607	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163006	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108282292_108282473_108283092_108283190_108283343_108283417_108283518
ES.33838.14	chr8	+	4582	9	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-9	-2322	intron_retention	FALSE	canonical	3	576	junction_8	33.6971808909885	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATTCTTATCAGTGACC	NA	False	NA	NA	False	NA	NA	NA	108163006	108270462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255
ES.33838.15	chr8	+	2888	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	224.333838458456	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163006	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108181661_108181768_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.16	chr8	+	4164	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	-24	-1382	-8	-1	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163007	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.17	chr8	+	4254	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_20	139.782115084665	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163007	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281686_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.18	chr8	+	4211	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	146.32464895759	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163013	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.2	chr8	+	2971	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	-22	1365	-22	17	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGGCTGCCCTTCTCTGC	NA	False	NA	28	True	AATAAA	-39	NA	108162974	108283862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.20	chr8	+	4398	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	186.855484859884	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163017	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108181661_108181768_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.21	chr8	+	4894	22	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	2	0	intron_retention	FALSE	canonical	3	576	junction_9	55.7317432966559	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108163017	108285227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276768_108278908_108279069_108280600_108280735_108281064_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.22	chr8	+	2815	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	145.434380704526	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163021	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.23	chr8	+	2927	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.633881349268	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163021	108283845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244512_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.24	chr8	+	3045	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	187.902969752121	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163024	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108229610_108229754_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.25	chr8	+	5873	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	4	0	intron_retention	FALSE	canonical	3	576	junction_9	56.9666424068282	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108163024	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.26	chr8	+	2890	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.941657959953	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163025	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184522_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.27	chr8	+	5034	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	576	junction_9	55.5296064283067	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTATTACCTGTTGCAA	NA	False	NA	4	True	AATAAA	-15	NA	108163028	108283838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.28	chr8	+	3091	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-1	0	intron_retention	FALSE	canonical	3	576	junction_9	55.8135177204464	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108163030	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.29	chr8	+	4157	3	NNC	ENSMUSG00000031930.12	novel	2758	23	NA	NA	0	-648	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	335.5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-28	NA	108163031	108183957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108180926_108181157
ES.33838.3	chr8	+	4325	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	0	-11	0	11	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAGCTGTTTATACACA	NA	False	NA	22	True	AATAAA	-25	NA	108162996	108285238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.30	chr8	+	2920	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	143.771097736727	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163031	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276387_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.31	chr8	+	4150	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	140.366910506776	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTGGTGTCAGTGTAG	NA	False	NA	9	True	AATAAA	-12	NA	108163031	108285225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283645
ES.33838.32	chr8	+	2991	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.286081674237	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	False	NA	5	True	AATAAA	-16	NA	108163031	108283839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108164425_108164526_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.33	chr8	+	2879	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	188.450341445502	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACCTGTTGCAAAGCC	NA	False	NA	8	True	AATAAA	-19	NA	108163032	108283842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233077_108244553_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283414_108283518
ES.33838.34	chr8	+	2994	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.286081674237	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163032	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108167770_108167871_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.35	chr8	+	7536	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	4	-1	intron_retention	FALSE	canonical	3	576	junction_9	56.9637408233961	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163035	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.36	chr8	+	2931	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	187.867343859674	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACCTGTTGCAAAGCC	NA	False	NA	8	True	AATAAA	-19	NA	108163036	108283842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108280900_108280943_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.37	chr8	+	2949	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.28899894356	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTATTACCTGTTGCA	NA	False	NA	3	True	AATAAA	-14	NA	108163036	108283837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108165811_108165888_108179610_108179696_108184074_108184223_108184522_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.38	chr8	+	4918	23	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	5	-1	intron_retention	FALSE	canonical	1	10	junction_19	142.91501838274	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163036	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281686_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.39	chr8	+	2850	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	142.941657959953	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108163037	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184550_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.40	chr8	+	4567	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_8	191.928044566487	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTGGTGTCAGTGTA	NA	False	NA	8	True	AATAAA	-11	NA	108163037	108285224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108253401_108253505_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.41	chr8	+	4181	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	146.563048797189	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTGGTGTCAGTGTA	NA	False	NA	8	True	AATAAA	-11	NA	108163037	108285224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.42	chr8	+	3256	17	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	42	4795	7	253	5prime_fragment	FALSE	canonical	3	576	junction_9	49.478372800649	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	108163038	108280432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908
ES.33838.44	chr8	+	6345	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	576	junction_8	56.7223919811754	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163040	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.45	chr8	+	2958	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.286081674237	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	False	NA	5	True	AATAAA	-16	NA	108163040	108283839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108165811_108165888_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.46	chr8	+	2547	22	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	149.978275070749	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108163041	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.47	chr8	+	4458	23	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	576	junction_9	55.8135177204464	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTGGTGTCAGTGTA	NA	False	NA	8	True	AATAAA	-11	NA	108163043	108285224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.48	chr8	+	4372	2	ISM	ENSMUSG00000031930.12	ENSMUST00000212645.2	640	5	2	26264	2	-647	5prime_fragment	FALSE	canonical	3	671	junction_1	0	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	108163049	108183958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108163074_108179610
ES.33838.5	chr8	+	4382	21	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	576	junction_9	51.0739414966184	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108162996	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281734_108282045_108283190_108283343
ES.33838.50	chr8	+	4437	25	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	186.108316728607	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108163052	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108282292_108282473_108283092_108283190_108283343_108283417_108283518
ES.33838.52	chr8	+	673	1	Intergenic	novelGene_27538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTGTAGGTGCTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	108163075	108163748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108163100_108163700
ES.33838.53	chr8	+	3046	24	NNC	ENSMUSG00000031930.12	novel	2098	8	NA	NA	5069	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.425853406319	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108168116	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108168309_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.54	chr8	+	2970	24	NNC	ENSMUSG00000031930.12	novel	2098	8	NA	NA	6850	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	143.049887526559	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTACCTGTTGCAAAGC	NA	False	NA	7	True	AATAAA	-18	NA	108169897	108283841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108170017_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.55	chr8	+	5926	23	NNC	ENSMUSG00000031930.12	novel	2098	8	NA	NA	6862	-5	intron_retention	FALSE	canonical	1	2	junction_1	146.091595008855	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	False	NA	5	True	AATAAA	-16	NA	108169909	108283839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108170017_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.56	chr8	+	7769	4	Genic_Genomic	ENSMUSG00000031930.12	novel	4314	24	NA	NA	12879	-624	multi-exon	TRUE	non_canonical	0	0	junction_1	0	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTCAAAGGGAAATAAC	NA	False	NA	NA	False	NA	NA	NA	108175926	108183981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_108177350_108177404_108180922_108181100_108181108_108181159
ES.33838.57	chr8	+	2951	24	NNC	ENSMUSG00000031930.12	novel	2098	8	NA	NA	13117	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.425853406319	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTACCTGTTGCAAAGC	NA	False	NA	7	True	AATAAA	-18	NA	108176164	108283841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108176265_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.58	chr8	+	2856	23	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	16559	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	146.628761849962	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGAGGGCTGCCCTT	NA	False	NA	22	True	AATAAA	-33	NA	108179606	108283856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276154_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.59	chr8	+	4240	23	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	16610	1	16559	-1	3prime_fragment	FALSE	canonical	3	576	junction_8	56.7776582762872	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108179606	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.6	chr8	+	4195	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	143.631314939953	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTGGTGTCAGTGTAGC	NA	False	NA	10	True	AATAAA	-13	NA	108162996	108285226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108278951_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.60	chr8	+	2858	23	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	16610	1383	16559	0	3prime_fragment	FALSE	canonical	3	576	junction_8	56.7776582762872	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108179606	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.61	chr8	+	2768	22	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	16559	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	149.659810760658	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108179606	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.62	chr8	+	2408	2	Intergenic	novelGene_27540	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	615	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACAGCTCCCTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	108189406	108192025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108191118_108191328
ES.33838.63	chr8	+	3254	19	ISM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	48253	0	1321	0	3prime_fragment	FALSE	canonical	3	576	junction_4	61.1900500263092	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108211284	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.64	chr8	+	159	1	Intergenic	novelGene_27541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	108235676	108235835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108235700_108235800
ES.33838.67	chr8	+	6009	12	NIC	ENSMUSG00000031930.12	novel	1996	15	NA	NA	-470	-1	intron_retention	FALSE	canonical	3	591	junction_4	57.2884538292731	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108271173	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.68	chr8	+	5138	13	NIC	ENSMUSG00000031930.12	novel	2758	23	NA	NA	-76	0	intron_retention	FALSE	canonical	3	591	junction_5	63.6977999794516	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108271567	108283844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.69	chr8	+	2525	7	NIC	ENSMUSG00000031930.12	novel	2098	8	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	617	junction_2	53.7290010660496	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTGTTGCAAAGCCA	NA	False	NA	9	True	AATAAA	-20	NA	108277946	108283843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_108279069_108280600_108280735_108281064_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.8	chr8	+	2801	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	-28	-15	7	14	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGGGCTGCCCTTCTC	NA	False	NA	25	True	AATAAA	-36	NA	108163003	108283859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ES.33838.9	chr8	+	2904	24	NNC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	141.674645240317	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163003	108283845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282066_108282151_108283092_108283190_108283343_108283417_108283518
ES.33839.1	chr8	-	464	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	-7	-8	-7	8	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTATCGCTTCTATGAA	NA	False	NA	NA	False	AATAAA	-45	NA	108166218	108165754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108165800_108166200
ES.3384.1	chr10	+	1464	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	-21	1	-21	-1	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGGCTCCTGCTGTGT	NA	False	NA	14	True	AATAAA	-18	NA	81220240	81224185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ES.3384.10	chr10	+	1832	7	NNC	ENSMUSG00000113262.2	novel	1758	6	NA	NA	-24	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	383.513761885484	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGCCATGACCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	81220275	81227387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81224907_81224965_81226192_81226419_81226622
ES.3384.11	chr10	+	1700	4	FSM	ENSMUSG00000078440.11	ENSMUST00000142346.8	786	4	-15	-899	-15	-2	multi-exon	FALSE	canonical	3	57	junction_1	334.282315815041	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGGCTCCTGCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	81220277	81224184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073
ES.3384.12	chr10	+	1985	7	NIC	ENSMUSG00000113262.2	novel	1758	6	NA	NA	-21	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	369.707542074363	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGCCATGACCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	81220278	81227388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540_81223753_81226192_81226419_81226622
ES.3384.13	chr10	+	4576	5	NIC	ENSMUSG00000113262.2	novel	1758	6	NA	NA	54	-6	intron_retention	FALSE	canonical	3	12	junction_4	330.54008834028	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGCCATGACCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	81220353	81227388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81226419_81226622
ES.3384.14	chr10	+	1014	3	ISM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	1930	5	737	-5	3prime_fragment	FALSE	canonical	3	742	junction_1	45.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTGCTGGCTCCTGCT	NA	False	NA	10	True	AATAAA	-14	NA	81222191	81224181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81222324_81223073_81223315_81223540
ES.3384.2	chr10	+	3942	1	FSM	ENSMUSG00000098811.3	ENSMUST00000184244.3	66	1	-1938	-1938	-1938	1938	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGGCTCCTGCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	81220242	81224184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81220200_81224200
ES.3384.3	chr10	+	3221	7	NIC	ENSMUSG00000113262.2	novel	1758	6	NA	NA	-41	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	369.470078475766	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCATGACCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	81220258	81227392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540_81224965_81226192_81226419_81226622
ES.3384.4	chr10	+	1427	5	NNC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_2	330.232777749272	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGCTGGCTCCTGCTG	NA	False	NA	11	True	AATAAA	-15	NA	81220258	81224182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81220413_81221552_81221866_81222246_81222324_81223073_81223315_81223540
ES.3384.5	chr10	+	2580	4	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	742	junction_2	37.1513421321791	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGGCTCCTGCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	81220263	81224184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81221882_81222246_81222324_81223073_81223315_81223540
ES.3384.6	chr10	+	1783	6	FSM	ENSMUSG00000113262.2	ENSMUST00000144647.8	1758	6	-31	6	-31	-6	multi-exon	FALSE	canonical	3	12	junction_5	364.148541120241	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGCCATGACCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	81220268	81227388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81226192_81226419_81226622
ES.3384.7	chr10	+	1482	5	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	318.019653480724	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGGCTCCTGCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	81220269	81224184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ES.3384.8	chr10	+	1419	5	NNC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	342.583840103412	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTGCTGGCTCCTGCT	NA	False	NA	10	True	AATAAA	-14	NA	81220273	81224181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81220405_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ES.3384.9	chr10	+	4429	6	NIC	ENSMUSG00000113262.2	novel	1758	6	NA	NA	-25	-6	intron_retention	FALSE	canonical	3	12	junction_5	312.034357082678	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGCCATGACCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	81220274	81227388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540_81226419_81226622
ES.33840.1	chr8	-	157	2	Antisense	novelGene_ENSMUSG00000065439.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	893	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	108315594	108181475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_108181509_108315470
ES.33840.10	chr8	-	1575	7	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	976.359223510145	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315080	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307962_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.12	chr8	-	2783	6	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	18	0	intron_retention	TRUE	non_canonical	0	0	junction_3	1014.63207124553	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315072	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307952_108309013_108309106_108310804_108312164_108312290_108312430_108313256_108313349_108314910
ES.33840.13	chr8	-	4125	6	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	32	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1062.1115948901	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315058	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108310169_108310347_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.15	chr8	-	4309	5	NIC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	27	0	intron_retention	FALSE	canonical	3	2367	junction_3	172.84530656052	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315063	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.17	chr8	-	1473	6	NIC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	1023.47592057654	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315080	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108314910
ES.33840.18	chr8	-	2404	7	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1228.53756782426	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315085	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307952_108309013_108309944_108310804_108310886_108311494_108311589_108312336_108312430_108313256_108313349_108314910
ES.33840.2	chr8	-	175	1	Intergenic	novelGene_27539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTTAAGGGGTAAAA	NA	False	NA	NA	False	NA	NA	NA	108188347	108188172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108188200_108188300
ES.33840.20	chr8	-	3435	5	NIC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	28	-1	intron_retention	FALSE	canonical	3	2410	junction_1	156.946447873152	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGTCCTAGTGGT	NA	False	NA	-7	True	ATTAAA	-13	NA	108315062	108307013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108309106_108310804_108310886_108311494_108311593_108312336_108313349_108314910
ES.33840.21	chr8	-	1536	7	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	944.196954500961	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTATGTCTGTGTCCT	NA	False	NA	-13	True	ATTAAA	-7	NA	108315080	108307019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313327_108314910
ES.33840.22	chr8	-	1130	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	-7	458	-7	-458	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCGTGTGCCACTAGGAG	NA	False	NA	-1	True	ATTAAA	-15	NA	108315103	108307470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.23	chr8	-	5106	4	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	0	-459	intron_retention	TRUE	non_canonical	0	0	junction_1	1232.97445229007	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCGTGTGCCACTAGGA	NA	False	NA	-2	True	ATTAAA	-14	NA	108315090	108307471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108312159_108312282_108312430_108313256_108313349_108314910
ES.33840.24	chr8	-	2173	6	NIC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	5	-459	intron_retention	FALSE	canonical	3	2367	junction_4	177.298166939199	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCGTGTGCCACTAGGA	NA	False	NA	-2	True	ATTAAA	-14	NA	108315085	108307471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.25	chr8	-	1153	2	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	31	-459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCGTGTGCCACTAGGA	NA	False	NA	-2	True	ATTAAA	-14	NA	108315059	108307471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307615_108314049
ES.33840.26	chr8	-	871	5	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	35	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1105.92450013552	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCGTGTGCCACTAGGA	NA	False	NA	-2	True	ATTAAA	-14	NA	108315055	108307471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311560_108314902
ES.33840.29	chr8	-	1274	2	Genic_Genomic	ENSMUSG00000039067.6	novel	1581	7	NA	NA	36	541	multi-exon	FALSE	non_canonical	0	0	junction_1	0	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAACAAAACTGGT	NA	False	NA	NA	False	NA	NA	NA	108315054	108313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_108313858_108313948
ES.33840.3	chr8	-	174	1	Intergenic	novelGene_27542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108291299	108291125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108291100_108291300
ES.33840.30	chr8	-	1265	2	Genic_Genomic	ENSMUSG00000039067.6	novel	1581	7	NA	NA	18	508	multi-exon	FALSE	canonical	0	0	junction_1	0	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	108315072	108313722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_108313870_108313954
ES.33840.31	chr8	-	856	1	FSM	ENSMUSG00000039067.6	ENSMUST00000213080.2	860	1	29	-25	29	25	mono-exon	FALSE	NA	NA	NA	NA	NA	784	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAAGACGGAGCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	108315061	108314205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108314200_108315100
ES.33840.32	chr8	-	178	1	Intergenic	novelGene_27543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	108315595	108315417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108315400_108315600
ES.33840.4	chr8	-	4190	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	56	-2665	50	2665	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTGGGTCATGTCTT	NA	False	NA	NA	False	NA	NA	NA	108315040	108304347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.5	chr8	-	1599	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	-7	-11	-7	11	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGTTTGTGTTATTTT	NA	False	NA	5	True	ATTAAA	-25	NA	108315103	108307001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33840.6	chr8	-	5768	1	Genic_Genomic	ENSMUSG00000039067.6	novel	NA	NA	NA	NA	2311	1	mono-exon	FALSE	NA	NA	NA	NA	NA	830	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCCTAGTGGTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	108312779	108307011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_108307000_108312800
ES.33840.8	chr8	-	3265	6	NNC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	5	0	intron_retention	FALSE	canonical	2	11	junction_3	1046.72575204778	839	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315085	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_108307952_108309013_108310886_108311494_108311589_108312336_108312430_108313256_108313349_108314910
ES.33840.9	chr8	-	2609	6	NIC	ENSMUSG00000039067.6	novel	1581	7	NA	NA	28	0	intron_retention	FALSE	canonical	3	2367	junction_4	177.298166939199	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315062	108307012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ES.33841.1	chr8	-	653	1	Intergenic	novelGene_27544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGCAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	108316358	108315705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108315700_108316400
ES.33842.1	chr8	+	280	1	Intergenic	novelGene_27545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCCGAGACA	NA	False	NA	NA	False	NA	NA	NA	108317903	108318183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108317900_108318200
ES.33842.2	chr8	+	162	1	Intergenic	novelGene_27546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	108317905	108318067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108317900_108318100
ES.33843.1	chr8	+	154	1	Intergenic	novelGene_27547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	108326540	108326694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108326500_108326700
ES.33844.1	chr8	-	4670	1	Intergenic	novelGene_27548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCGTGGGGGGGGGCGGG	NA	False	NA	NA	False	AGTAAA	-32	NA	108400227	108395557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108395600_108400200
ES.33844.2	chr8	-	5347	1	Intergenic	novelGene_27549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCCCATGTTTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	108403840	108398493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108398500_108403800
ES.33845.1	chr8	-	2737	2	Intergenic	novelGene_27550	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408901	108404227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108406853_108408789
ES.33845.3	chr8	-	3241	1	Intergenic	novelGene_27551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	108407472	108404231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108404200_108407500
ES.33845.4	chr8	-	798	3	Intergenic	novelGene_27552	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTTGCCTTGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	108408873	108404232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108404803_108404901_108405046_108408789
ES.33845.5	chr8	-	717	1	Intergenic	novelGene_27553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAATCGGCCTTCATG	NA	False	NA	NA	False	AATAAA	-18	NA	108405324	108404607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108404600_108405300
ES.33845.6	chr8	-	3496	1	Intergenic	novelGene_27554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGGAATCTTCACAGG	NA	False	NA	NA	False	NA	NA	NA	108408873	108405377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108405400_108408900
ES.33845.7	chr8	-	1587	2	Intergenic	novelGene_27555	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-24	NA	108408923	108405399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108406853_108408789
ES.33845.8	chr8	-	1090	2	Intergenic	novelGene_27556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAAATAGACAAGC	NA	False	NA	NA	False	NA	NA	NA	108408873	108405846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_108406853_108408789
ES.33846.1	chr8	+	181	1	Intergenic	novelGene_27557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAGAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	108438419	108438600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108438400_108438600
ES.33847.1	chr8	+	5652	1	Intergenic	novelGene_27558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	108459519	108465171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_108459500_108465200
ES.33848.1	chr8	-	171	1	Intergenic	novelGene_27559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8810	False	NA	NA	False	NA	NA	NA	109242895	109242724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109242700_109242900
ES.33849.1	chr8	+	3901	4	NNC	ENSMUSG00000038872.11	novel	16433	10	NA	NA	309	46488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.10960933531265	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGCACAGAGTTTGCT	NA	False	NA	NA	False	TATAAA	-36	NA	109441584	109573390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109441963_109518833_109521602_109526826_109527324_109573132
ES.33849.2	chr8	+	7057	9	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	314	12673	314	-12673	5prime_fragment	FALSE	canonical	1	3	junction_3	2.71281680177634	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCGTACAACTTCAGCA	NA	False	NA	NA	False	NA	NA	NA	109441589	109675589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109441963_109518833_109521602_109526826_109527324_109583353_109583586_109641153_109641262_109660163_109660298_109660440_109660642_109671733_109671837_109672948
ES.33849.3	chr8	+	3873	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	330	165913	330	-4553	5prime_fragment	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCCGAAGTTTTGATAG	NA	False	NA	NA	False	AATAAA	-21	NA	109441605	109522349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109441963_109518833
ES.33849.4	chr8	+	8977	9	NIC	ENSMUSG00000038872.11	novel	16433	10	NA	NA	435	-4253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.59807621135332	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCTAACCCTGTTAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	109441710	109684009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_109441963_109526826_109527324_109583353_109583586_109641153_109641262_109660163_109660298_109660440_109660642_109671733_109671837_109672948_109678403_109682013
ES.33849.5	chr8	+	3998	4	NNC	ENSMUSG00000038872.11	novel	17152	16	NA	NA	41538	44871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.71404520791032	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATGACGAGCCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	109482813	109571773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109482934_109518833_109521602_109526826_109527324_109571160
ES.33849.6	chr8	+	4654	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	234246	4476	234246	-4476	3prime_fragment	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCAATTTCAAAACTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	109675521	109683786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109678403_109682013
ES.33849.7	chr8	+	4309	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	235403	3664	235403	-3664	3prime_fragment	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACAAGTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	109676678	109684598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109678403_109682013
ES.33849.8	chr8	+	2764	2	ISM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	236246	4366	236246	-4366	3prime_fragment	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAAGCGTGGGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	109677521	109683896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109678403_109682013
ES.33849.9	chr8	+	2030	1	NIC	ENSMUSG00000038872.11	novel	17152	16	NA	NA	240687	-4270	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAACACGAA	NA	False	NA	NA	False	NA	NA	NA	109681962	109683992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_109682000_109684000
ES.3385.1	chr10	+	900	4	FSM	ENSMUSG00000078439.10	ENSMUST00000105322.9	901	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTTTGTGTAGGCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	81228884	81231225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81228994_81229617_81229730_81229921_81229985_81230609
ES.33850.1	chr8	+	3254	1	ISM	ENSMUSG00000038872.11	ENSMUST00000220518.2	17152	16	1015724	9	243724	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATGAGCAAAAG	NA	False	NA	NA	False	NA	NA	NA	109684999	109688253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109685000_109688300
ES.33850.2	chr8	+	2549	1	ISM	ENSMUSG00000038872.11	ENSMUST00000220518.2	17152	16	1015871	567	243871	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGGTTGTTTGTTGG	NA	False	NA	NA	False	AATAAA	-29	NA	109685146	109687695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_109685100_109687700
ES.33851.1	chr8	-	220	1	Intergenic	novelGene_27560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109451579	109451359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109451400_109451600
ES.33852.1	chr8	-	1659	1	Intergenic	novelGene_27561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCTCTCCATTTACA	NA	False	NA	NA	False	ATTAAA	-43	NA	109665339	109663680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109663700_109665300
ES.33853.1	chr8	-	3221	1	Antisense	novelGene_ENSMUSG00000038872.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCATCATATCCATAAGT	6609	False	NA	NA	False	TTTAAA	-11	NA	109675591	109672370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_109672400_109675600
ES.33854.1	chr8	-	2499	1	Antisense	novelGene_ENSMUSG00000038872.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTCTGGCTTTAGGG	9991	False	NA	NA	False	NA	NA	NA	109683229	109680730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_109680700_109683200
ES.33854.2	chr8	-	2612	3	Antisense	novelGene_ENSMUSG00000038872.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109801779	109680753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_109683123_109781419_109781489_109801605
ES.33854.3	chr8	-	159	1	Intergenic	novelGene_27562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	109701598	109701439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109701400_109701600
ES.33855.1	chr8	+	1781	4	NIC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	-12	-1454	intron_retention	FALSE	canonical	0	0	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACAAAACTCCTAGCCA	NA	False	NA	NA	False	NA	NA	NA	109801841	109978817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_109802377_109963661_109963759_109976488_109976556_109977735
ES.33855.10	chr8	+	7949	1	Genic_Genomic	ENSMUSG00000097393.9	novel	NA	NA	NA	NA	2034	6209	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	109978531	109986480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_109978500_109986500
ES.33855.2	chr8	+	4060	6	NNC	ENSMUSG00000097393.9	novel	1351	6	NA	NA	-9	-531	intron_retention	FALSE	canonical	0	0	junction_5	2.36643191323985	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTTTGCTTACATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	109801844	109954159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802031_109802193_109802377_109904324_109904447_109905930_109905959_109946719_109949812_109953710
ES.33855.3	chr8	+	1187	8	NNC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	-6	-2367	intron_retention	FALSE	canonical	0	0	junction_4	3.04389653609465	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCCCAAAACCCCAAGT	NA	False	NA	NA	False	ATTAAA	-27	NA	109801847	109977904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802377_109904324_109904447_109905930_109905959_109949765_109949812_109955780_109955918_109963661_109963759_109976488_109976556_109977743
ES.33855.4	chr8	+	1217	9	NNC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	1	-2390	intron_retention	FALSE	non_canonical	0	0	junction_4	3.24037034920393	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTGCTTCTTTGGTG	NA	False	NA	NA	False	ATTAAA	-4	NA	109801855	109977881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802377_109904324_109904447_109905930_109905959_109949765_109949812_109955780_109955918_109961758_109961812_109963661_109963759_109976488_109976556_109977735
ES.33855.5	chr8	+	4774	10	NNC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	3	1052	intron_retention	FALSE	non_canonical	0	0	junction_5	3.15445990368409	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGTTCTCTATGTGGT	NA	False	NA	NA	False	AATATA	-45	NA	109801857	109981323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802377_109904324_109904447_109905930_109905959_109946719_109946814_109949765_109949812_109954833_109954910_109955780_109955918_109963661_109963759_109976488_109976556_109977735
ES.33855.6	chr8	+	4152	8	NNC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	-4	602	intron_retention	FALSE	non_canonical	0	0	junction_1	3.28881840949181	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAATGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109801872	109980873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802377_109949765_109949812_109954833_109954910_109955780_109955918_109961758_109961846_109963661_109963759_109976488_109976556_109977735
ES.33855.7	chr8	+	1062	8	NNC	ENSMUSG00000097393.9	novel	3677	10	NA	NA	25	-2396	intron_retention	FALSE	canonical	1	2	junction_3	2.37332110369088	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGCTTTGTGCTTCT	NA	False	NA	NA	False	AAAAAG	-6	NA	109801901	109977875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_109802377_109904324_109904447_109905930_109905959_109949765_109949812_109961758_109961846_109963661_109963759_109976488_109976556_109977735
ES.33855.8	chr8	+	1632	1	Intergenic	novelGene_27563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAATTTATT	NA	False	NA	NA	False	NA	NA	NA	109807997	109809629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_109808000_109809600
ES.33855.9	chr8	+	2121	1	Intergenic	novelGene_27566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109965625	109967746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_109965600_109967700
ES.33856.1	chr8	-	399	1	Intergenic	novelGene_27564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAACAGG	NA	False	NA	NA	False	NA	NA	NA	109809100	109808701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109808700_109809100
ES.33857.1	chr8	-	159	1	Intergenic	novelGene_27565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTGAATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	109890064	109889905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_109889900_109890100
ES.33858.1	chr8	-	1108	1	FSM	ENSMUSG00000110528.2	ENSMUST00000211890.2	174	1	-44	-890	-44	890	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	110067540	110066432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110066400_110067500
ES.33859.1	chr8	+	195	1	Intergenic	novelGene_27567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTTATGG	NA	False	NA	NA	False	NA	NA	NA	110165402	110165597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110165400_110165600
ES.3386.1	chr10	+	157	1	Intergenic	novelGene_2614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	7909	False	NA	NA	False	NA	NA	NA	81241078	81241235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81241100_81241200
ES.33860.1	chr8	-	2389	5	Intergenic	novelGene_27569	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.6583123951777	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCCTGTACAAATCT	NA	False	NA	NA	False	NA	NA	NA	110185358	110174634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110176067_110182436_110182606_110183802_110183912_110184372_110184554_110184860
ES.33860.2	chr8	-	2711	4	Intergenic	novelGene_27570	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCCTGTACAAATCT	NA	False	NA	NA	False	NA	NA	NA	110185369	110174634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110176067_110182432_110182606_110183802_110183912_110184372
ES.33860.3	chr8	-	2422	5	Intergenic	novelGene_27568	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGCCTGTACAAATCT	NA	False	NA	NA	False	NA	NA	NA	110185289	110174634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110176067_110182484_110182606_110183802_110183912_110184372_110185080_110185236
ES.33860.4	chr8	-	2640	4	Intergenic	novelGene_27571	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAATTTTGTGCCTGT	NA	False	NA	NA	False	NA	NA	NA	110185358	110174642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110176067_110182484_110182606_110183802_110183912_110184372
ES.33861.1	chr8	+	300	1	Intergenic	novelGene_27572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACTAATCCTGAGA	NA	False	NA	NA	False	TTTAAA	-4	NA	110206641	110206941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110206600_110206900
ES.33862.1	chr8	-	4206	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	252	8	at_least_one_novel_splicesite	TRUE	canonical	3	11	junction_8	25.3294563886939	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATCTCCTTTCTCTT	NA	False	NA	6	True	AATAAA	-27	NA	110292241	110274634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280792_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
ES.33862.12	chr8	-	5491	26	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	243	-3	intron_retention	FALSE	canonical	3	11	junction_7	25.0189048521313	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTGCATTTTAAATC	NA	False	NA	-5	True	AATAAA	-16	NA	110292250	110274645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280792_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
ES.33862.13	chr8	-	4488	26	NIC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	122	-4	intron_retention	FALSE	canonical	3	61	junction_23	17.5633254254426	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTGCATTTTAAAT	NA	False	NA	-6	True	AATAAA	-15	NA	110292371	110274646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
ES.33862.15	chr8	-	5839	23	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	243	-4	intron_retention	FALSE	canonical	3	48	junction_21	20.0967186170667	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTGCATTTTAAAT	NA	False	NA	-6	True	AATAAA	-15	NA	110292250	110274646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110285384_110285550_110285713_110286169_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110289416_110292122
ES.33862.16	chr8	-	4226	26	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	117	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.9599713876821	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTATTGCATTTTAAAT	NA	False	NA	-6	True	AATAAA	-15	NA	110292376	110274646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
ES.33862.2	chr8	-	4465	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_24	18.695314731221	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAATCTCCTTTCTCT	NA	False	NA	5	True	AATAAA	-26	NA	110292491	110274635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
ES.33862.3	chr8	-	4223	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	244	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	26.890007162645	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292249	110274642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289414_110292116
ES.33862.9	chr8	-	4218	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	243	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.8810814439206	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATTGCATTTTAAATC	NA	False	NA	-5	True	AATAAA	-16	NA	110292250	110274645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110275116_110276405_110276528_110278194_110278288_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284937_110285271_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287357_110287931_110288037_110288580_110288769_110289075_110289416_110292122
ES.33863.1	chr8	+	1898	5	NNC	ENSMUSG00000031723.9	novel	1890	4	NA	NA	51	-11	intron_retention	FALSE	canonical	0	0	junction_1	32.9421842020228	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTCAGCAGGGTT	NA	False	NA	4	True	AATAAA	-43	NA	110292574	110300672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110292696_110295354_110295425_110295521_110295730_110298002_110298155_110299325
ES.33863.2	chr8	+	1801	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	78	11	78	-11	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACTGTCAGCAGGGTT	NA	False	NA	4	True	AATAAA	-43	NA	110292601	110300672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
ES.33864.1	chr8	-	3772	1	Antisense	novelGene_ENSMUSG00000031723.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCCAAACGGAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	110296404	110292632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_110292600_110296400
ES.33864.4	chr8	-	4846	4	NNC	ENSMUSG00000031722.11	novel	1345	5	NA	NA	1516	9100	intron_retention	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110303773	110292659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110292694_110295519_110295730_110298000_110298154_110299324
ES.33865.1	chr8	-	344	1	Intergenic	novelGene_27573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTTGGTGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	110316751	110316407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110316400_110316800
ES.33866.1	chr8	+	391	1	Antisense	novelGene_ENSMUSG00000031730.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAATGTTTAA	NA	False	NA	NA	False	NA	NA	NA	110319675	110320066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110319700_110320100
ES.33866.2	chr8	+	154	1	Antisense	novelGene_ENSMUSG00000031730.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAATAAAATAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	110319675	110319829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110319700_110319800
ES.33867.1	chr8	-	2906	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	9	-876	9	646	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTCCAAGTTCCTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	110335246	110319232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.10	chr8	-	1611	8	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-21	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	176.991409914926	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTAGAATATATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110335019	110320112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.11	chr8	-	2541	7	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-21	-5	intron_retention	FALSE	canonical	1	1	junction_6	175.970404708671	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335019	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334953
ES.33867.12	chr8	-	1908	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-12	-5	combination_of_known_junctions	FALSE	canonical	1	23	junction_8	169.433615318803	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335317	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110335171
ES.33867.13	chr8	-	1842	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	227.400939971672	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335311	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110322278_110322393_110322661_110322850_110328054_110328138_110328276_110328371_110329934_110330135_110332839_110333053_110335171
ES.33867.14	chr8	-	1951	8	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	16	-5	intron_retention	FALSE	canonical	3	350	junction_7	44.9107959385796	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335036	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.15	chr8	-	2519	6	ISM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	5948	5	-1164	-5	3prime_fragment	FALSE	canonical	1	150	junction_2	126.760561690141	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110329307	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054
ES.33867.17	chr8	-	1838	9	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	175.181156235481	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335029	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334953
ES.33867.19	chr8	-	1783	9	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.306742424226	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335012	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321259_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.2	chr8	-	2267	9	NIC	ENSMUSG00000031730.19	novel	3807	9	NA	NA	-21	4	intron_retention	TRUE	canonical	1	1	junction_6	196.609344577006	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGTCACTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	110335019	110319874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110328276_110328371_110329934_110330135_110332839_110333053_110334983
ES.33867.20	chr8	-	1661	8	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	16	-5	combination_of_known_splicesites	FALSE	canonical	1	53	junction_2	146.177415268891	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGCTAGAATATATTG	NA	False	NA	NA	False	AATAAA	-14	NA	110335036	110320113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.21	chr8	-	2991	7	NNC	ENSMUSG00000031730.19	novel	3807	9	NA	NA	-1894	-6	intron_retention	FALSE	canonical	1	3	junction_2	214.922014280116	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATGCTAGAATATATT	NA	False	NA	NA	False	AATAAA	-13	NA	110330037	110320114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321412_110321665_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110328276
ES.33867.22	chr8	-	1680	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	195.3316090652	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATGCTAGAATATATT	NA	False	NA	NA	False	AATAAA	-13	NA	110335008	110320114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110328276_110328371_110332839_110333053_110334983
ES.33867.23	chr8	-	2098	8	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	3	-7	intron_retention	FALSE	canonical	3	3	junction_7	163.974612270887	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAATGCTAGAATATAT	NA	False	NA	NA	False	AATAAA	-12	NA	110335252	110320115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110332986_110334983
ES.33867.24	chr8	-	3419	5	NIC	ENSMUSG00000031730.19	novel	3807	9	NA	NA	-1746	9	intron_retention	FALSE	canonical	2	19	junction_4	194.732348365648	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATCCCTTCTTGGGGGC	NA	False	NA	0	True	AATAAA	-22	NA	110329889	110320369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110328276
ES.33867.25	chr8	-	1574	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	203	262	0	8	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCATCCCTTCTTGGGGG	NA	False	NA	-1	True	AATAAA	-21	NA	110335052	110320370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.26	chr8	-	1644	9	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	175.445103593688	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCATCCCTTCTTGGG	NA	False	NA	-3	True	AATAAA	-19	NA	110335308	110320372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110335167
ES.33867.28	chr8	-	1476	9	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-26	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	174.653943556966	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCCATCCCTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	110335024	110320373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110332986_110334983
ES.33867.29	chr8	-	1678	8	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-25	5	intron_retention	FALSE	canonical	3	350	junction_7	44.9107959385796	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCCATCCCTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	110335023	110320373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.3	chr8	-	3693	9	NIC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-21	2	intron_retention	FALSE	canonical	1	19	junction_6	168.398151711947	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGTCACTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	110335019	110319876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110328276_110330135_110332839_110333053_110334983
ES.33867.32	chr8	-	3431	6	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-2428	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	197.045578483761	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAAATCCCATCCCTT	NA	False	NA	-9	True	AATAAA	-13	NA	110325342	110320378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322936_110322998
ES.33867.33	chr8	-	1442	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	230	367	27	57	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCTCTAGATCTGAGT	NA	False	NA	-106	True	ATTAAA	-15	NA	110335025	110320475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.34	chr8	-	995	6	ISM	ENSMUSG00000031730.19	ENSMUST00000143900.8	1455	7	246	1729	-11	554	5prime_fragment	FALSE	canonical	3	350	junction_5	52.021534002757	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGAGTCTGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	110335009	110322107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.4	chr8	-	2234	8	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-11	2	intron_retention	FALSE	canonical	1	2	junction_1	163.257777887659	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGTCACTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	110335009	110319876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320059_110320562_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.5	chr8	-	2271	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	0	-232	0	2	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGTCACTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	110335255	110319876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.6	chr8	-	2101	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	-55	-7	-5	7	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTGTTATTGCTTAAA	NA	False	NA	NA	False	AATAAA	-26	NA	110335310	110320101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ES.33867.7	chr8	-	4638	3	NIC	ENSMUSG00000031730.19	novel	912	5	NA	NA	-2592	-3	intron_retention	FALSE	canonical	3	464	junction_2	3.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCTAGAATATATTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	110325506	110320111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110320764_110321251_110322393_110322661
ES.33867.9	chr8	-	2558	7	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_6	176.341209653961	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTAGAATATATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110335308	110320112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110320764_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110335226
ES.33868.1	chr8	+	1267	7	ISM	ENSMUSG00000048827.13	ENSMUST00000212545.2	2450	16	14513	3484	14513	181	internal_fragment	FALSE	canonical	0	0	junction_2	3.13138237134266	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCATTGCTTTCATCA	NA	False	NA	NA	False	NA	NA	NA	110388629	110397534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_110388877_110391040_110391166_110392179_110392341_110393606_110393818_110394158_110394261_110395847_110395980_110397245
ES.33869.1	chr8	-	3796	1	Antisense	novelGene_ENSMUSG00000048827.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCTTGTTTTTTTCGGT	NA	False	NA	NA	False	AATAAA	-14	NA	110395706	110391910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_110391900_110395700
ES.3387.1	chr10	+	176	1	Intergenic	novelGene_2616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGGTATTTTCCTCAT	6224	False	NA	NA	False	NA	NA	NA	81274462	81274638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81274500_81274600
ES.33870.1	chr8	+	165	1	Antisense	novelGene_ENSMUSG00000031729.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAACCCACTT	NA	False	NA	NA	False	NA	NA	NA	110401447	110401612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110401400_110401600
ES.33871.1	chr8	+	179	1	Intergenic	novelGene_27574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	110404708	110404887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110404700_110404900
ES.33872.1	chr8	+	189	1	Intergenic	novelGene_27576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATGCCTTGGCTTTG	NA	False	NA	NA	False	NA	NA	NA	110414633	110414822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110414600_110414800
ES.33873.1	chr8	+	2327	1	Antisense	novelGene_ENSMUSG00000031729.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCGACTCCCTCGAC	NA	False	NA	NA	False	NA	NA	NA	110417548	110419875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110417500_110419900
ES.33873.2	chr8	+	1892	1	Antisense	novelGene_ENSMUSG00000031729.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTGTTATTTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	110419435	110421327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110419400_110421300
ES.33873.3	chr8	+	2522	1	Antisense	novelGene_ENSMUSG00000031729.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGACTACCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	110419478	110422000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_110419500_110422000
ES.33874.1	chr8	+	2046	8	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	9.62776596885385	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTGGCTCCCTTGTCTC	NA	False	NA	6	True	AATAAA	-19	NA	110432154	110451562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110449518_110449686_110450595
ES.33874.2	chr8	+	2435	7	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	14	junction_4	7.26674311886388	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432166	110451564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444520_110447826_110448491_110449518_110449686_110450595
ES.33874.3	chr8	+	2128	9	FSM	ENSMUSG00000031728.11	ENSMUST00000034163.9	2127	9	-1	0	-1	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432179	110451564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ES.33874.4	chr8	+	3114	8	NNC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-1	0	intron_retention	FALSE	canonical	2	5	junction_1	8.78077677750246	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432179	110451564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110432197_110432988_110433052_110434660_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ES.33874.5	chr8	+	2025	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	7	1	4	-1	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTCCCTTGTCTCA	NA	False	NA	7	True	AATAAA	-20	NA	110432184	110451563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ES.33874.6	chr8	+	2076	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432250	110451564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ES.33874.7	chr8	+	2025	9	NNC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.0389991278345	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTCCCTTGTCTCATT	NA	False	NA	9	True	AATAAA	-22	NA	110432256	110451565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110432496_110432988_110433052_110434660_110434734_110436038_110436160_110444393_110444539_110447833_110447976_110448385_110448491_110449518_110449686_110450595
ES.33875.1	chr8	-	3501	9	NNC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	5	16	intron_retention	FALSE	canonical	0	0	junction_3	276.825955024091	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTGGATTTTAG	NA	False	NA	3	True	AATAAA	-36	NA	110419874	110397940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110402007_110403483_110404251_110404315_110405482_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.10	chr8	-	4119	8	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-9	3	intron_retention	FALSE	canonical	3	462	junction_2	70.5558108803208	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTCAAATGAGTGA	NA	False	NA	-10	True	AATAAA	-23	NA	110419901	110397953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110403389_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.11	chr8	-	2206	10	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-33	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	197.709538789597	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTCAAATGAGTGA	NA	False	NA	-10	True	AATAAA	-23	NA	110419925	110397953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404251_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.12	chr8	-	2118	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-12	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	214.416504728531	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTCAAATGAGTGA	NA	False	NA	-10	True	AATAAA	-23	NA	110419904	110397953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110403389_110403483_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.14	chr8	-	7019	7	FSM	ENSMUSG00000031729.7	ENSMUST00000212562.2	6990	7	-24	-5	-11	2	multi-exon	FALSE	canonical	3	544	junction_1	46.2508258184531	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTTGGTCAAATGAGTG	NA	False	NA	-11	True	AATAAA	-22	NA	110419903	110397954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.15	chr8	-	4742	7	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-10	2	intron_retention	FALSE	canonical	3	544	junction_2	45.3017659699928	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTTGGTCAAATGAGTG	NA	False	NA	-11	True	AATAAA	-22	NA	110419902	110397954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110404319_110405486_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.16	chr8	-	2482	11	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	245.924866575139	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTGGTCAAATGAGT	NA	False	NA	-12	True	AATAAA	-21	NA	110419909	110397955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.18	chr8	-	3720	2	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	2088	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110402138	110397956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110399735
ES.33875.19	chr8	-	2319	9	NNC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.348144270205	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	-14	True	AATAAA	-19	NA	110419953	110397957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110403385_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.2	chr8	-	4082	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-12	16	intron_retention	FALSE	canonical	3	23	junction_2	205.239951032931	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAATTTGGATTTTAG	NA	False	NA	3	True	AATAAA	-36	NA	110419904	110397940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110402274_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.20	chr8	-	2177	8	NNC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.92190511365	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	-14	True	AATAAA	-19	NA	110419904	110397957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110404113_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.21	chr8	-	3404	10	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_6	255.017646448241	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	-14	True	AATAAA	-19	NA	110419874	110397957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110402007_110402057_110402274_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408734_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.22	chr8	-	2948	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	462	junction_2	70.3738898669102	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	-14	True	AATAAA	-19	NA	110419902	110397957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110403389_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.23	chr8	-	2281	9	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.348144270205	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGTTGGTCAAATGA	NA	False	NA	-14	True	AATAAA	-19	NA	110419909	110397957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399284_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.24	chr8	-	1784	5	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	282.564152008	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419912	110397958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.25	chr8	-	1976	7	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	243.988160004174	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419909	110397958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.26	chr8	-	2205	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	210.091311993143	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419888	110397958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.27	chr8	-	5018	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	5	1	intron_retention	FALSE	canonical	3	462	junction_1	75.1563994281259	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419874	110397958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.28	chr8	-	5034	7	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	5	1	intron_retention	FALSE	canonical	1	1	junction_5	298.615509011542	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGTGTTGGTCAAATG	NA	False	NA	-15	True	AATAAA	-18	NA	110419887	110397958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110402274_110405598_110406055_110406140_110408738_110408827_110410307_110410411_110419815
ES.33875.29	chr8	-	4801	8	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	528	junction_2	50.7197180189162	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419891	110397959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110403483_110404117_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.3	chr8	-	3689	9	FSM	ENSMUSG00000031729.7	ENSMUST00000212973.2	3633	9	-39	-17	-39	13	multi-exon	FALSE	canonical	3	528	junction_2	54.85990680816	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGAATTTGGATTT	NA	False	NA	0	True	AATAAA	-33	NA	110419931	110397943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110399274_110402007_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.30	chr8	-	4628	11	Fusion	ENSMUSG00000069895.5_ENSMUSG00000031729.7	novel	3633	9	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	309.943607774059	561	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110464349	110397959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_110399274_110403385_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110458772_110460375_110461936_110461996_110462091_110462158_110464262
ES.33875.31	chr8	-	3689	11	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	249.573556291527	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419897	110397959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110399735_110401119_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.33	chr8	-	3078	10	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	6	junction_3	258.989679950742	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419875	110397960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.35	chr8	-	3413	8	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-20	0	intron_retention	FALSE	canonical	3	462	junction_2	69.8155002963715	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419912	110397960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110403389_110404319_110405486_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.36	chr8	-	2231	4	NNC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-76	0	intron_retention	FALSE	non_canonical	0	0	junction_1	276.243049183545	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110404302	110397960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110397989_110398962_110399274_110402007_110403634_110404036
ES.33875.37	chr8	-	2300	10	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	198.108898847248	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419901	110397960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410416_110419829
ES.33875.38	chr8	-	5914	6	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	586	junction_1	31.9562200518146	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419912	110397960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.39	chr8	-	4113	12	Fusion	ENSMUSG00000069895.5_ENSMUSG00000031729.7	novel	2304	10	NA	NA	-13	-1	multi-exon	FALSE	canonical	0	0	junction_9	264.099154933074	561	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCTAGTGTTGGTCAA	NA	False	NA	-18	True	AATAAA	-15	NA	110464384	110397961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110458664_110460375_110461936_110461996_110464262
ES.33875.40	chr8	-	3304	8	ISM	ENSMUSG00000031729.7	ENSMUST00000212973.2	3633	9	23	3040	10	-2596	5prime_fragment	FALSE	canonical	3	528	junction_1	57.3054828733424	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTAGCTTGCTTACATT	NA	False	NA	NA	False	NA	NA	NA	110419869	110401000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.41	chr8	-	1851	1	Intergenic	novelGene_27575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGGCCTTCCAGTGATG	NA	False	NA	NA	False	NA	NA	NA	110414418	110412567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110412600_110414400
ES.33875.42	chr8	-	4075	2	NNC	ENSMUSG00000069895.5	novel	7439	3	NA	NA	-810	17077	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTAGCCTGTTATTCT	NA	False	NA	NA	False	NA	NA	NA	110459555	110436005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110439190_110458664
ES.33875.43	chr8	-	3619	5	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-9	17077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.3895116933639	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTAGCCTGTTATTCT	NA	False	NA	NA	False	NA	NA	NA	110464380	110436005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110437646_110439097_110439190_110458664_110460375_110461936_110461996_110464262
ES.33875.44	chr8	-	2338	7	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-226	17044	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAGAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	110458971	110436038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110436961_110437544_110437646_110438246_110438436_110439097_110439190_110441183_110441346_110456516_110456574_110458156
ES.33875.45	chr8	-	9077	1	Genic_Genomic	ENSMUSG00000069895.5	novel	NA	NA	NA	NA	3592	7006	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGGGTTATGTGCGTC	NA	False	NA	NA	False	AATAAA	-20	NA	110455153	110446076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_110446100_110455200
ES.33875.46	chr8	-	7530	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	-87	-4	-70	0	multi-exon	FALSE	canonical	3	17	junction_2	6.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGCGCCTTTTTCCT	NA	False	NA	0	True	NA	NA	NA	110464441	110453082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110460375_110461936_110461996_110464262
ES.33875.48	chr8	-	7531	4	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	4	junction_1	11.5854314646552	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGGTGTTTGCGCCT	NA	False	NA	-7	True	NA	NA	NA	110464380	110453089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110460378_110461936_110461996_110462091_110462158_110464262
ES.33875.5	chr8	-	2343	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	-34	-5	-34	5	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGGTCAAATGAGTGAAT	NA	False	NA	-8	True	AATAAA	-25	NA	110419926	110397951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.50	chr8	-	4812	5	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-1	-189	intron_retention	FALSE	non_canonical	0	0	junction_1	12.6885775404495	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGTGAGATCCTTT	NA	False	NA	6	True	AATAAA	-21	NA	110464372	110453275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110453927_110456448_110460375_110461936_110461996_110462091_110462158_110464262
ES.33875.51	chr8	-	4750	4	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-9	-194	intron_retention	FALSE	non_canonical	0	0	junction_1	12.2836838484589	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTACTTTTGTGAGAT	NA	False	NA	1	True	AATAAA	-16	NA	110464380	110453280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110453928_110456448_110460375_110461936_110461996_110464262
ES.33875.52	chr8	-	7369	4	FSM	ENSMUSG00000069895.5	ENSMUST00000093162.4	7526	4	-41	198	-41	-194	multi-exon	FALSE	canonical	3	22	junction_3	4.32049379893857	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTACTTTTGTGAGAT	NA	False	NA	1	True	AATAAA	-16	NA	110464412	110453280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
ES.33875.54	chr8	-	7302	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	-58	195	-41	-195	multi-exon	FALSE	canonical	3	17	junction_2	6.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTACTTTTGTGAGA	NA	False	NA	0	True	AATAAA	-15	NA	110464412	110453281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110460375_110461936_110461996_110464262
ES.33875.55	chr8	-	6178	4	NNC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	5	-1	intron_retention	FALSE	canonical	3	4	junction_1	11.5854314646552	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGCTGTCAGTTGTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	110464349	110454411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110460378_110461936_110461996_110462091_110462158_110464262
ES.33875.56	chr8	-	6299	3	NIC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	22	junction_2	4	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCAGCTGTCAGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	110464380	110454414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110460375_110461936_110462158_110464262
ES.33875.57	chr8	-	2789	4	FSM	ENSMUSG00000069895.5	ENSMUST00000212726.2	461	4	22	-2350	5	2350	multi-exon	FALSE	canonical	3	22	junction_3	4.32049379893857	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGTTTTCTTTCTTT	NA	False	NA	NA	False	AAGAAA	-36	NA	110464349	110457797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
ES.33875.58	chr8	-	1511	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	-22	5950	-5	1111	multi-exon	FALSE	canonical	3	17	junction_2	6.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAATGGTTGTAGCCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	110464376	110459036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110460375_110461936_110461996_110464262
ES.33875.59	chr8	-	2645	1	Genic_Genomic	ENSMUSG00000069895.5	novel	NA	NA	NA	NA	-13	-1592	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACCCCAGGTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	110464384	110461739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_110461700_110464400
ES.33875.6	chr8	-	5477	7	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-33	4	intron_retention	FALSE	canonical	3	586	junction_1	32.9313258497471	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	-9	True	AATAAA	-24	NA	110419925	110397952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.7	chr8	-	4318	8	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	-42	4	intron_retention	FALSE	canonical	3	544	junction_2	46.3676523416214	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGTCAAATGAGTGAA	NA	False	NA	-9	True	AATAAA	-24	NA	110419934	110397952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ES.33875.8	chr8	-	2187	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	207.364074456016	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTCAAATGAGTGA	NA	False	NA	-10	True	AATAAA	-23	NA	110419875	110397953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110419815
ES.33875.9	chr8	-	2393	11	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	245.297146334808	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTCAAATGAGTGA	NA	False	NA	-10	True	AATAAA	-23	NA	110419875	110397953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110411494_110411598_110419815
ES.33876.1	chr8	-	174	1	Intergenic	novelGene_27577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCGAGCAAAGT	4403	False	NA	NA	False	NA	NA	NA	110498673	110498499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110498500_110498700
ES.33877.1	chr8	+	4081	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_6	46.8494158831788	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCCCACATTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110505152	110587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556312_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.10	chr8	+	4854	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-312	-850	40	850	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTGTGGAGGCTTT	NA	False	NA	NA	False	AATAGA	-18	NA	110505225	110588840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.11	chr8	+	4187	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-310	-185	42	185	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCCGAGTGTTTTTTAG	NA	False	NA	11	True	ATTAAA	-24	NA	110505227	110588175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.12	chr8	+	6644	22	NIC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	45	3	intron_retention	FALSE	canonical	1	4	junction_1	45.8165522773706	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGCTGCCTTGCTTC	NA	False	NA	19	True	AATAAA	-21	NA	110505230	110590839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110505595_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.13	chr8	+	5462	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-307	-1463	45	-1382	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCCCACTTATTGACA	NA	False	NA	NA	False	AATAAA	-17	NA	110505230	110589453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.18	chr8	+	3511	24	NNC	ENSMUSG00000031731.17	novel	6899	24	NA	NA	87	534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.4020933608587	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAGGTTGTTTGTAAAC	NA	False	NA	NA	False	TATAAA	-16	NA	110505272	110587456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110522145_110522234_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.2	chr8	+	3717	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-348	323	4	-323	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACATGAATAGTTATTAA	NA	False	NA	NA	False	ATTAAA	-25	NA	110505189	110587667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.20	chr8	+	3908	22	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	109	176	intron_retention	FALSE	non_canonical	0	0	junction_10	60.1130831553324	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAAGAGTGCCGAGT	NA	False	NA	2	True	ATTAAA	-15	NA	110505294	110588166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569983_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.21	chr8	+	6971	22	NIC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	109	-5	intron_retention	FALSE	canonical	3	143	junction_1	23.007935139101	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCGTTCCCACATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110505294	110587985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.22	chr8	+	3958	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	116	182	intron_retention	FALSE	canonical	0	0	junction_1	59.9749947894954	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTGCCGAGTGTTTTT	NA	False	NA	8	True	ATTAAA	-21	NA	110505301	110588172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110506502_110506555_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.23	chr8	+	6713	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	116	3	intron_retention	FALSE	canonical	0	0	junction_2	46.4462054424255	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGCTGCCTTGCTTC	NA	False	NA	19	True	AATAAA	-21	NA	110505301	110590839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110529578_110529719_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.24	chr8	+	3745	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-29	-7	intron_retention	FALSE	canonical	0	0	junction_21	46.5574380880468	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATCGTTCCCACATT	NA	False	NA	NA	False	AATAAA	-13	NA	110505499	110587983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585408_110585530_110586725
ES.33877.29	chr8	+	6855	23	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_6	60.483947054071	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTAAACTTTGCTGC	NA	False	NA	11	True	AATAAA	-13	NA	110505522	110590831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556312_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569681_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.3	chr8	+	6895	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-347	-2856	5	10	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGCTTCTTGGATG	NA	False	NA	26	True	AATAAA	-28	NA	110505190	110590846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.34	chr8	+	6343	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-14	-2637	-5	-208	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGCTAATGAAGTTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	110505523	110590627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.35	chr8	+	5722	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-14	-2016	-5	-829	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGGAAGGAGGAGTTTGA	NA	False	NA	NA	False	AATATA	-17	NA	110505523	110590006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.36	chr8	+	3174	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-13	531	-4	-531	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTTGTTTGTAAACACT	NA	False	NA	NA	False	TATAAA	-19	NA	110505524	110587459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.39	chr8	+	177	1	Intergenic	novelGene_27581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5904	False	NA	NA	False	NA	NA	NA	110528289	110528466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110528300_110528500
ES.33877.40	chr8	+	2613	1	Intergenic	novelGene_27582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAATGC	NA	False	NA	NA	False	NA	NA	NA	110540025	110542638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110540000_110542600
ES.33877.41	chr8	+	3420	21	ISM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	40010	13	-24202	-13	3prime_fragment	FALSE	canonical	3	149	junction_10	20.7891798780038	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTTAAAGAAATCGTTCC	NA	False	NA	NA	False	AATAAA	-7	NA	110545547	110587977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.42	chr8	+	5919	18	NNC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	-13520	1	intron_retention	FALSE	canonical	0	0	junction_1	51.2377591086643	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAACTTTGCTGCCTTGCT	NA	False	NA	17	True	AATAAA	-19	NA	110556229	110590837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110556312_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.43	chr8	+	3065	18	ISM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	50692	3	-13520	-3	3prime_fragment	FALSE	canonical	3	149	junction_7	22.0507436182467	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTCCCACATTGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	110556229	110587987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.44	chr8	+	5726	12	ISM	ENSMUSG00000031731.17	ENSMUST00000093157.13	6899	24	64466	-3	-98	3	3prime_fragment	FALSE	canonical	3	149	junction_1	22.8129294932965	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGCTGCCTTGCTTC	NA	False	NA	19	True	AATAAA	-21	NA	110569651	110590839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.45	chr8	+	2380	8	ISM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	72544	5	-6998	-5	3prime_fragment	FALSE	canonical	3	180	junction_1	11.6828847430062	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCGTTCCCACATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	110578081	110587985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.5	chr8	+	3820	22	NIC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	20	0	intron_retention	FALSE	canonical	1	4	junction_1	45.8165522773706	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCCCACATTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110505205	110587990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110505595_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33877.9	chr8	+	6740	22	NNC	ENSMUSG00000031731.17	novel	6899	24	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_2	61.6255240579705	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAACTTTGCTGCCTTGC	NA	False	NA	16	True	AATAAA	-18	NA	110505214	110590836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110505595_110529578_110529783_110553225_110553368_110554869_110554967_110556230_110556312_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ES.33878.1	chr8	-	176	1	Intergenic	novelGene_27578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAAAGCA	9772	False	NA	NA	False	NA	NA	NA	110512407	110512231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110512200_110512400
ES.33879.1	chr8	-	5179	1	Intergenic	novelGene_27579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAATCTCAGAAT	3388	False	NA	NA	False	NA	NA	NA	110518791	110513612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110513600_110518800
ES.3388.1	chr10	-	3569	11	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-13	485	intron_retention	TRUE	non_canonical	0	0	junction_1	10.0004999875006	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCAGCCCCCTTACCTA	3885	False	NA	NA	False	AAAAAG	-4	NA	81263034	81231534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81231551_81234793_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ES.3388.10	chr10	-	3499	10	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-545	178	intron_retention	FALSE	canonical	1	2	junction_9	9.66091783079296	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	NA	False	NA	0	True	AATAAA	-16	NA	81267384	81234793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81267313
ES.3388.11	chr10	-	3664	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	-16	-1993	-16	178	multi-exon	FALSE	canonical	3	13	junction_9	6.76775214792936	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	64	False	NA	0	True	AATAAA	-16	NA	81266855	81234793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
ES.3388.13	chr10	-	3007	9	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-2795	178	intron_retention	FALSE	canonical	0	0	junction_8	10.7463656647259	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTATTTCTATTTGTA	NA	False	NA	0	True	AATAAA	-16	NA	81246270	81234793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81246159
ES.3388.14	chr10	-	3544	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	-21	-175	-7	175	multi-exon	FALSE	canonical	3	18	junction_9	5.66557723732532	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTGGTATTTCTATTT	3891	False	NA	-3	True	AATAAA	-13	NA	81263028	81234796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ES.3388.15	chr10	-	3514	10	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-742	156	intron_retention	FALSE	canonical	1	1	junction_9	9.94180598145224	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATCCAA	NA	False	NA	-22	True	NA	NA	NA	81267581	81234815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81267473
ES.3388.16	chr10	-	2848	8	NNC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	5	156	intron_retention	FALSE	canonical	0	0	junction_7	11.1336958676564	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATCCAA	85	False	NA	-22	True	NA	NA	NA	81266834	81234815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81266783
ES.3388.17	chr10	-	7287	8	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	2231	2996	2158	14	3prime_fragment	FALSE	canonical	2	12	junction_1	7.01892485516471	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATACACAAAATATATATA	6129	False	NA	NA	False	ATTAAA	-19	NA	81260790	81235015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100
ES.3388.18	chr10	-	176	1	Intergenic	novelGene_2615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAATAAGGAACCAT	7661	False	NA	NA	False	NA	NA	NA	81259258	81259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81259100_81259300
ES.3388.2	chr10	-	5114	1	NIC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	-748	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTTGGTTCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	81237136	81232022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81232000_81237100
ES.3388.3	chr10	-	6472	10	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	-545	-4	intron_retention	FALSE	canonical	1	1	junction_9	9.94180598145224	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCTTGGTTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	81267384	81232023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81267110
ES.3388.4	chr10	-	6321	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	-26	-2947	-12	-5	multi-exon	FALSE	canonical	3	18	junction_9	5.66557723732532	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTCTTGGTTCTTCCT	3886	False	NA	NA	False	NA	NA	NA	81263033	81232024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ES.3388.5	chr10	-	6358	10	FSM	ENSMUSG00000055053.19	ENSMUST00000221817.2	1531	10	-74	-4753	-74	-14	multi-exon	FALSE	canonical	0	0	junction_9	10.2246373958465	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTTCGCCTTCTCTTG	7273	False	NA	NA	False	NA	NA	NA	81291543	81232033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81291373
ES.3388.6	chr10	-	6078	8	NIC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	5	-14	intron_retention	FALSE	canonical	0	0	junction_2	10.222025039999	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTTCGCCTTCTCTTG	3917	False	NA	NA	False	NA	NA	NA	81263002	81232033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81236906_81240657_81240843_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ES.3388.7	chr10	-	6243	10	NNC	ENSMUSG00000055053.19	novel	3348	10	NA	NA	12	-34	intron_retention	FALSE	canonical	0	0	junction_7	11.9049735430923	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTATAAAAATTAAATAAGC	3924	False	NA	NA	False	AATAAA	-40	NA	81262995	81232053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81246159_81246226_81256100_81256633_81262909
ES.3388.8	chr10	-	6288	9	NIC	ENSMUSG00000055053.19	novel	1655	10	NA	NA	15	-42	intron_retention	FALSE	canonical	2	12	junction_1	7.82224392358101	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATGTATAAAAATT	95	False	NA	NA	False	AATAAA	-32	NA	81266824	81232061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
ES.3388.9	chr10	-	6334	10	FSM	ENSMUSG00000055053.19	ENSMUST00000117966.2	1655	10	19	-4698	19	-69	multi-exon	FALSE	canonical	3	13	junction_9	6.76775214792936	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	99	False	NA	NA	False	AATAAA	-5	NA	81266820	81232088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81266619
ES.33880.1	chr8	-	337	1	Intergenic	novelGene_27580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACCTGAGACCCTA	NA	False	NA	NA	False	NA	NA	NA	110528067	110527730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110527700_110528100
ES.33881.1	chr8	-	3653	1	Antisense	novelGene_ENSMUSG00000031731.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAAAAGCAGCCA	NA	False	NA	NA	False	NA	NA	NA	110559025	110555372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_110555400_110559000
ES.33881.2	chr8	-	1934	1	Antisense	novelGene_ENSMUSG00000031731.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCCGAAAGTATGAGCTC	NA	False	NA	NA	False	CATAAA	-43	NA	110559025	110557091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_110557100_110559000
ES.33882.1	chr8	+	6788	20	NNC	ENSMUSG00000031732.13	novel	7846	19	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1.05525987661913	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTGCTTTATGAATA	NA	False	NA	NA	False	NA	NA	NA	110595190	110671302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110595350_110603434_110603716_110622139_110622274_110630871_110631063_110634126_110634253_110635664_110635820_110638319_110638467_110638836_110639068_110640200_110640404_110646712_110646774_110649447_110649544_110652381_110652538_110655086_110655288_110659762_110659926_110660590_110660722_110661264_110661376_110662100_110662296_110663643_110663876_110666385_110667552_110668653
ES.33883.1	chr8	-	181	1	Intergenic	novelGene_27583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGTCTCAATTTTTGT	6141	False	NA	NA	False	NA	NA	NA	110600856	110600675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110600700_110600900
ES.33884.1	chr8	-	2383	3	FSM	ENSMUSG00000001672.15	ENSMUST00000051430.7	2447	3	38	26	3	-26	multi-exon	TRUE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAGATC	NA	False	NA	NA	False	NA	NA	NA	110688797	110679568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110681374_110686344_110686473_110688347
ES.33885.1	chr8	+	4914	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-44	-7	-28	7	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTTGCTTCCTATAAT	907	False	NA	NA	False	AATAAA	-23	NA	110806349	110819380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
ES.33885.10	chr8	+	5301	6	NNC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	-4	385	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.6845683113545	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGAGGTAAAATGTCTA	931	False	NA	NA	False	AATAAA	-16	NA	110806373	110819758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110806637_110809309_110809375_110810072_110810106_110810288_110810416_110810975_110811084_110815053
ES.33885.11	chr8	+	4766	4	NIC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.68331255192114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTGAGACTTGCTT	939	False	NA	NA	False	AATAAA	-15	NA	110806381	110819372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110806637_110809309_110809375_110810288_110810416_110815053
ES.33885.12	chr8	+	4057	4	NIC	ENSMUSG00000044676.11	novel	3180	5	NA	NA	4	-1	intron_retention	FALSE	canonical	3	16	junction_1	4.98887651569859	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATACTTCCAAATAAGTT	939	False	NA	NA	False	AATAAA	-21	NA	110806381	110817641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110806637_110809309_110810416_110810975_110811084_110815053
ES.33885.13	chr8	+	4939	6	NNC	ENSMUSG00000044676.11	novel	3180	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.75442745129572	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGCTGAGACTTGCTT	953	False	NA	NA	False	AATAAA	-15	NA	110806395	110819372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110806637_110809309_110809375_110810072_110810106_110810238_110810412_110810975_110811084_110815053
ES.33885.2	chr8	+	2924	5	NNC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	-28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4253297309965	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCCAAATAAGTTTGAG	907	False	NA	NA	False	AATAAA	-25	NA	110806349	110817645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110806382_110809309_110809375_110810288_110810416_110810975_110811084_110815053
ES.33885.3	chr8	+	3214	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-35	1	-17	-1	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATACTTCCAAATAAGTT	918	False	NA	NA	False	AATAAA	-21	NA	110806360	110817641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
ES.33885.4	chr8	+	5808	4	NIC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	16	junction_1	4.98887651569859	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTGCTGAGACTTGCT	918	False	NA	NA	False	AATAAA	-14	NA	110806360	110819371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110806637_110809309_110810416_110810975_110811084_110815053
ES.33885.5	chr8	+	3168	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	-33	1728	-17	3	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCCAAATAAGTTTGAG	918	False	NA	NA	False	AATAAA	-25	NA	110806360	110817645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
ES.33885.6	chr8	+	4914	6	NNC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.9178752511649	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	930	False	NA	NA	False	AATAAA	-16	NA	110806372	110819373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110806637_110809309_110809375_110810072_110810106_110810291_110810416_110810975_110811084_110815053
ES.33885.7	chr8	+	5097	5	NNC	ENSMUSG00000044676.11	novel	4863	5	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.80752262296652	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATTGCTGAGACTTGC	930	False	NA	NA	False	AATAAA	-13	NA	110806372	110819370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110806637_110809309_110809375_110810072_110810416_110810975_110811084_110815053
ES.33885.9	chr8	+	4954	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-22	-1752	-4	21	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGAGAGGCTATATAT	931	False	NA	NA	False	AATAAA	-37	NA	110806373	110819394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
ES.33886.1	chr8	+	1651	9	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	51	52	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	7.68114574786861	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGATTGTGTGTTTCA	NA	False	NA	10	True	AATAAA	-17	NA	110827889	110838645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110828167_110835615_110835750_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
ES.33886.2	chr8	+	1708	9	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	63	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.2736184954957	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGATTGTGTGTTTCA	NA	False	NA	10	True	AATAAA	-17	NA	110827901	110838645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110828167_110835615_110835750_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837364_110837438_110837593_110837930_110838005_110838289
ES.33886.3	chr8	+	1763	8	NNC	ENSMUSG00000095941.4	novel	1649	10	NA	NA	137	52	intron_retention	FALSE	non_canonical	0	0	junction_2	8.2015429110899	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGATTGTGTGTTTCA	NA	False	NA	10	True	AATAAA	-17	NA	110827975	110838645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_110828167_110835615_110835750_110836017_110836077_110836409_110836623_110836712_110837295_110837438_110837593_110837930_110838005_110838289
ES.33887.1	chr8	+	3646	2	Intergenic	novelGene_27584	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTGCTTTGCGTGTC	8240	False	NA	NA	False	NA	NA	NA	110855386	110859097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_110858331_110858395
ES.33888.1	chr8	-	1166	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15130	12	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCGTGGGCCACATTT	NA	False	NA	0	True	AATAAA	-34	NA	110879708	110869157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
ES.33888.2	chr8	-	1916	12	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	-733	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	77.1743759127384	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTTTCTTGTCGTGGGC	6879	False	NA	-7	True	AATAAA	-27	NA	110895575	110869164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675_110894984_110895240
ES.33888.4	chr8	-	1119	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15137	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	85.1886692876465	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTCACCCGTTTCTTG	NA	False	NA	-15	True	AATAAA	-19	NA	110879701	110869172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879680
ES.33888.5	chr8	-	2168	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	-740	3	-736	-3	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTCACCCGTTTCTTG	6876	False	NA	-15	True	AATAAA	-19	NA	110895578	110869172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
ES.33888.6	chr8	-	3607	10	NIC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	154	junction_8	38.9130083933666	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACACTCACCCGTTTCTT	7613	False	NA	-16	True	AATAAA	-18	NA	110894841	110869173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110883629_110894675
ES.33888.7	chr8	-	1335	9	NIC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	83.0026355003261	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACACTCACCCGTTTCT	7611	False	NA	-17	True	AATAAA	-17	NA	110894843	110869174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_110869833_110872283_110872356_110873932_110873987_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
ES.33889.1	chr8	+	3666	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-118	-3	-118	3	multi-exon	FALSE	canonical	3	60	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTGTTTCATTA	3522	False	NA	NA	False	AATAAA	-16	NA	110944502	110951121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110944719_110947671
ES.33889.2	chr8	+	3474	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-118	189	-118	-189	multi-exon	TRUE	canonical	3	60	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTTAATTTGTCATTA	3522	False	NA	11	True	AATAAA	-18	NA	110944502	110950929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110944719_110947671
ES.33889.3	chr8	+	2572	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	-15	988	-15	-988	multi-exon	FALSE	canonical	3	60	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTGGCTTGTTCTGA	3625	False	NA	NA	False	ATTAAA	-16	NA	110944605	110950130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110944719_110947671
ES.33889.4	chr8	+	3960	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	6	-421	6	421	multi-exon	FALSE	canonical	3	60	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTGAAACTTGCTTTT	3646	False	NA	NA	False	GATAAA	-15	NA	110944626	110951539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_110944719_110947671
ES.3389.1	chr10	-	3393	3	ISM	ENSMUSG00000034818.18	ENSMUST00000238823.2	1477	12	18230	-2949	6333	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTCACCTTGTTTT	3220	False	NA	-1	True	AATAAA	-21	NA	81300308	81295061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81298176_81298502_81298647_81300173
ES.33890.1	chr8	-	133	1	Intergenic	novelGene_27585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110959015	110958882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_110958900_110959000
ES.33891.1	chr8	+	3808	19	NIC	ENSMUSG00000059854.9	novel	5330	26	NA	NA	-20	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.916245694581702	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATTATTTGAGACTCT	NA	False	NA	NA	False	AATAAA	-31	NA	110993588	111174166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_110993664_111024706_111024865_111026556_111026683_111035709_111035830_111038782_111038918_111052983_111053184_111061323_111061449_111081584_111081787_111092009_111092194_111107189_111107290_111118912_111119032_111124576_111124801_111130918_111130987_111137074_111137311_111139844_111139946_111142335_111142472_111144999_111145165_111146355_111146509_111172985
ES.33892.1	chr8	-	476	2	Antisense	novelGene_ENSMUSG00000059854.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTTGAGTTTTGTC	6978	False	NA	NA	False	NA	NA	NA	111171022	111163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111163780_111170863
ES.33893.1	chr8	-	180	1	Intergenic	novelGene_27586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111211434	111211254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111211300_111211400
ES.33894.1	chr8	+	2538	10	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	56043	25060	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	2.70801280154532	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCATGGTTGGTCTTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	111227163	111239313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111238331
ES.33894.10	chr8	+	6259	23	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	62309	-50634	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	8.15703316670005	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAAACTGCCTAGAATT	NA	False	NA	NA	False	TTTAAA	-8	NA	111233429	111286251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111245709_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.12	chr8	+	4181	8	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247113	74623	69601	48009	intron_retention	FALSE	canonical	3	20	junction_2	3.48173074484398	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGCAAAACAGTAGGCAAA	NA	False	NA	NA	False	AATATA	-21	NA	111240721	111262262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
ES.33894.13	chr8	+	9599	48	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	69601	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	10.457830992272	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGATCTACATTCAGGC	NA	False	NA	NA	False	ATTAAA	-16	NA	111240721	111336881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111240920_111241461_111241636_111245712_111245928_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260_111284497_111287654_111287773_111290427_111290633_111291599_111291836_111293230_111293383_111293532_111293723_111295956_111296060_111296243_111296532_111298442_111298586_111301472_111301692_111304782_111304944_111306180_111306279_111307302_111307499_111308591_111308805_111309298_111309438_111310533_111310700_111312654_111312803_111313665_111313874_111314267_111314490_111316081_111316252_111319240_111319440_111320298_111320458_111321849_111322128_111324418_111324639_111325590_111325804_111326873_111327038_111327869_111328021_111329793_111330025_111334316_111334542_111336206
ES.33894.14	chr8	+	5464	19	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	69602	-50633	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.37704215656966	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAAACTGCCTAGAATTT	NA	False	NA	NA	False	TTTAAA	-9	NA	111240722	111286252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111240920_111241461_111241636_111245712_111245928_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.15	chr8	+	2042	8	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247114	76761	69602	45871	internal_fragment	FALSE	canonical	3	20	junction_2	3.48173074484398	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTCTTTAATATTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	111240722	111260124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
ES.33894.16	chr8	+	5465	19	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247114	50638	69602	-50638	internal_fragment	FALSE	canonical	3	19	junction_12	4.32370725702428	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGATTAAACTGCCTAG	NA	False	NA	NA	False	TTTAAA	-4	NA	111240722	111286247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.17	chr8	+	10333	47	NIC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	69642	996	combination_of_known_splicesites	FALSE	canonical	0	0	junction_45	10.7828059238624	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTGGAGTAGATTTGC	NA	False	NA	NA	False	ATTAAA	-18	NA	111240762	111337881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260_111284497_111287654_111287773_111290427_111290633_111291599_111291836_111293230_111293383_111293532_111293723_111295956_111296060_111296243_111296532_111298442_111298586_111301472_111301692_111304782_111304944_111306180_111306279_111307302_111307499_111308591_111308805_111309298_111309438_111310533_111310700_111312654_111312803_111313665_111313874_111314267_111314490_111316081_111316252_111319240_111319440_111320298_111320458_111321849_111322128_111324418_111324639_111325590_111325804_111326873_111327038_111327869_111328021_111334316_111334542_111336206
ES.33894.18	chr8	+	5385	19	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	69823	-50631	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.93961222126926	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTGCCTAGAATTTCT	NA	False	NA	NA	False	TTTAAA	-11	NA	111240943	111286254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111241055_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252259_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.19	chr8	+	4060	5	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	256154	74092	78642	48540	intron_retention	FALSE	canonical	3	22	junction_4	3.26917420765551	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTGGTGTGTTGAC	NA	False	NA	NA	False	NA	NA	NA	111249762	111262793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
ES.33894.2	chr8	+	1958	8	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	56045	20728	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.71804251292006	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	111227165	111234981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111234174
ES.33894.20	chr8	+	4868	15	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	258328	50644	80816	-50644	internal_fragment	FALSE	canonical	3	19	junction_8	4.59813626840888	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGGATTAAACT	NA	False	NA	NA	False	NA	NA	NA	111251936	111286241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.21	chr8	+	4193	14	NIC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	80873	-50644	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.3155233746339	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGGATTAAACT	NA	False	NA	NA	False	NA	NA	NA	111251993	111286241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111252260_111254538_111254681_111257680_111257850_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.22	chr8	+	4496	13	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	263986	50637	86474	-50637	internal_fragment	FALSE	canonical	3	19	junction_6	4.68078222332787	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGATTAAACTGCCTAGA	NA	False	NA	NA	False	TTTAAA	-5	NA	111257594	111286248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.23	chr8	+	7927	41	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	266048	107	88536	-107	3prime_fragment	FALSE	canonical	1	1	junction_15	9.89898984745413	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTTGTATGTGTTTAG	354	False	NA	NA	False	NA	NA	NA	111259656	111336778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260_111284497_111287654_111287773_111290427_111290633_111291599_111291836_111293230_111293383_111293532_111293723_111295956_111296060_111296243_111296532_111298442_111298586_111301472_111301692_111304782_111304944_111306180_111306279_111307302_111307499_111308591_111308805_111309298_111309438_111310533_111310700_111312654_111312803_111313665_111313874_111314267_111314490_111316081_111316252_111319240_111319440_111320298_111320458_111321849_111322128_111324418_111324639_111325590_111325804_111326873_111327038_111327869_111328021_111329793_111330025_111334316_111334542_111336206
ES.33894.24	chr8	+	8072	37	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	272809	-988	95297	988	3prime_fragment	FALSE	canonical	1	1	junction_11	8.89374867151635	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACACTGGCCCTGGAGT	7115	False	NA	NA	False	ATTAAA	-10	NA	111266417	111337873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260_111284497_111287654_111287773_111290427_111290633_111291599_111291836_111293230_111293383_111293532_111293723_111295956_111296060_111296243_111296532_111298442_111298586_111301472_111301692_111304782_111304944_111306180_111306279_111307302_111307499_111308591_111308805_111309298_111309438_111310533_111310700_111312654_111312803_111313665_111313874_111314267_111314490_111316081_111316252_111319240_111319440_111320298_111320458_111321849_111322128_111324418_111324639_111325590_111325804_111326873_111327038_111327869_111328021_111329793_111330025_111334316_111334542_111336206
ES.33894.25	chr8	+	415	1	Intergenic	novelGene_27589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATATGTGATGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	111275103	111275518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111275100_111275500
ES.33894.26	chr8	+	2146	9	NIC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	148270	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.20156211871642	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATCTACATTCAGGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	111319390	111336882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111319440_111320298_111320458_111321849_111322128_111325590_111325804_111326873_111327038_111327869_111328021_111329793_111330025_111334316_111334542_111336206
ES.33894.27	chr8	+	174	1	Intergenic	novelGene_27591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	111328503	111328677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111328500_111328700
ES.33894.3	chr8	+	11314	58	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	233557	-1	56045	1	3prime_fragment	TRUE	canonical	1	1	junction_32	9.8213340563779	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTACATTCAGGCTAAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	111227165	111336886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260_111284497_111287654_111287773_111290427_111290633_111291599_111291836_111293230_111293383_111293532_111293723_111295956_111296060_111296243_111296532_111298442_111298586_111301472_111301692_111304782_111304944_111306180_111306279_111307302_111307499_111308591_111308805_111309298_111309438_111310533_111310700_111312654_111312803_111313665_111313874_111314267_111314490_111316081_111316252_111319240_111319440_111320298_111320458_111321849_111322128_111324418_111324639_111325590_111325804_111326873_111327038_111327869_111328021_111329793_111330025_111334316_111334542_111336206
ES.33894.4	chr8	+	3058	13	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	56045	29000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.08811250749125	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAGCATTCCAGT	NA	False	NA	NA	False	AATAAA	-15	NA	111227165	111243253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111242271
ES.33894.5	chr8	+	3593	3	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	233558	101904	56046	20728	intron_retention	FALSE	canonical	1	6	junction_1	1	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGTGTC	NA	False	NA	NA	False	NA	NA	NA	111227166	111234981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111227451_111229557_111229686_111231800
ES.33894.6	chr8	+	7156	29	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	56059	-50632	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	9.51066801662475	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACTGCCTAGAATTTC	NA	False	NA	NA	False	TTTAAA	-10	NA	111227179	111286253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111245712_111245928_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.7	chr8	+	7157	29	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	233571	50637	56059	-50637	internal_fragment	FALSE	canonical	1	5	junction_3	9.2493794607078	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGATTAAACTGCCTAGA	NA	False	NA	NA	False	TTTAAA	-5	NA	111227179	111286248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111227451_111229557_111229686_111231800_111231932_111232374_111232512_111232725_111232854_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
ES.33894.9	chr8	+	3289	16	NNC	ENSMUSG00000059854.9	novel	15783	87	NA	NA	58649	45871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1928079219287	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTCTTTAATATTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	111229769	111260124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111229850_111231800_111231932_111232374_111232512_111233059_111233252_111233512_111233663_111235515_111235756_111237467_111237631_111239623_111239798_111240745_111240920_111241461_111241636_111245709_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307
ES.33895.1	chr8	-	3018	1	Antisense	novelGene_ENSMUSG00000059854.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACTCCAGGGGCT	NA	False	NA	NA	False	NA	NA	NA	111221730	111218712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111218700_111221700
ES.33895.10	chr8	-	283	2	Antisense	novelGene_ENSMUSG00000059854.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATAGACTTTTAGTT	9322	False	NA	NA	False	NA	NA	NA	111248816	111245454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111245619_111248697
ES.33895.11	chr8	-	1030	1	Intergenic	novelGene_27587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGCAAGGACCATGGAT	8953	False	NA	NA	False	NA	NA	NA	111249185	111248155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111248200_111249200
ES.33895.12	chr8	-	169	1	Intergenic	novelGene_27588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTCGTCTGTTCATG	8952	False	NA	-3	True	NA	NA	NA	111249186	111249017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111249000_111249200
ES.33895.2	chr8	-	2724	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGGTGTGGTGGTAC	9330	False	NA	NA	False	AGTAAA	-13	NA	111248808	111219912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500_111227611_111248697
ES.33895.3	chr8	-	1254	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTATTCCTGAGTCTAT	9578	False	NA	NA	False	NA	NA	NA	111248560	111221341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500_111227611_111248490
ES.33895.4	chr8	-	663	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGGTATTTGGTCATAT	9324	False	NA	1	True	TATAAA	-30	NA	111248814	111221979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500_111227611_111248697
ES.33895.5	chr8	-	592	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	103.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGTATTTGGTCATA	9292	False	NA	0	True	TATAAA	-29	NA	111248846	111221980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500_111227611_111248799
ES.33895.6	chr8	-	832	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGTATTTGGTCATA	9361	False	NA	0	True	TATAAA	-29	NA	111248777	111221980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500_111227611_111248490
ES.33895.7	chr8	-	4828	2	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	207	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTGGATGCCACATG	NA	False	NA	-15	True	TATAAA	-14	NA	111231908	111221995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111222416_111227500
ES.33895.9	chr8	-	554	2	Antisense	novelGene_ENSMUSG00000059854.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATTGAGAGTTGATCAA	9561	False	NA	NA	False	AGTAAA	-32	NA	111248577	111243118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111243586_111248490
ES.33896.1	chr8	-	184	1	Intergenic	novelGene_27590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGACTTTATTTTATGC	NA	False	NA	NA	False	NA	NA	NA	111287099	111286915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111286900_111287100
ES.33897.1	chr8	+	2377	15	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	-24	-18411	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	120.857754979875	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTCAGTTTCATG	7323	False	NA	NA	False	NA	NA	NA	111345192	111418904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111418517
ES.33897.10	chr8	+	2623	18	ISM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	-11	4686	3	1333	5prime_fragment	FALSE	canonical	3	368	junction_15	41.2383568552939	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTTCTGGGAGT	7350	False	NA	NA	False	NA	NA	NA	111345219	111442344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058
ES.33897.12	chr8	+	3112	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	164.578316192215	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCAAGTCTGCCTGCTC	7350	False	NA	12	True	AATAAA	-16	NA	111345219	111447026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436999_111437125_111437372_111437459_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.13	chr8	+	3981	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-15	-92	3	92	intron_retention	FALSE	canonical	3	368	junction_15	41.455548482682	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAGGTGCTATGACTTC	7350	False	NA	NA	False	NA	NA	NA	111345219	111441103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
ES.33897.14	chr8	+	3071	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	141.239574071684	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7350	False	NA	14	True	AATAAA	-18	NA	111345219	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362109_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409261_111436953_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.16	chr8	+	3028	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	108.376002992781	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7350	False	NA	14	True	AATAAA	-18	NA	111345219	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436999_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.17	chr8	+	2918	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	109.401644060697	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7353	False	NA	14	True	AATAAA	-18	NA	111345222	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.18	chr8	+	2783	17	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	113.340678377183	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCAAGTCTGCCTGCTC	7353	False	NA	12	True	AATAAA	-16	NA	111345222	111447026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.2	chr8	+	3102	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	-31	-2	-17	2	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGCCTGCTCCTTCTC	7330	False	NA	18	True	AATAAA	-22	NA	111345199	111447032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.21	chr8	+	3176	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	143.99478085535	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGTCTGCCTGCTCC	7359	False	NA	13	True	AATAAA	-17	NA	111345228	111447027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409261_111436953_111437125_111438224_111438344_111439379_111439514_111442004_111442210_111446438
ES.33897.22	chr8	+	2868	17	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	113.672226159251	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7361	False	NA	14	True	AATAAA	-18	NA	111345230	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111442058_111442210_111446438
ES.33897.23	chr8	+	2263	16	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	-19434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	157.336073422467	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTCAGATTCTTCA	7361	False	NA	NA	False	CATAAA	-13	NA	111345230	111417881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111411338_111411454_111417685
ES.33897.24	chr8	+	3007	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.410357233779	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7361	False	NA	16	True	AATAAA	-20	NA	111345230	111447030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345564_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.25	chr8	+	3064	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	108.072635039794	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7361	False	NA	14	True	AATAAA	-18	NA	111345230	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361818_111362015_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.26	chr8	+	2541	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	0	1333	0	100	5prime_fragment	FALSE	canonical	3	368	junction_15	41.455548482682	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTAGTTTTGTCTGTT	7365	False	NA	NA	False	GATAAA	-34	NA	111345234	111439678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
ES.33897.27	chr8	+	2910	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_17	108.822098559751	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGTCTGCCTGCTCC	7366	False	NA	13	True	AATAAA	-17	NA	111345235	111447027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111446438
ES.33897.3	chr8	+	3215	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	140.032643602262	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7330	False	NA	16	True	AATAAA	-20	NA	111345199	111447030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111411338_111411454_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.30	chr8	+	2992	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	110.624555988005	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7370	False	NA	14	True	AATAAA	-18	NA	111345239	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.32	chr8	+	3859	17	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	6	9	1	-9	intron_retention	FALSE	canonical	3	368	junction_15	41.455548482682	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGGCAATCAGCATGA	7371	False	NA	NA	False	NA	NA	NA	111345240	111441002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379
ES.33897.33	chr8	+	3198	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	140.179603828945	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7371	False	NA	14	True	AATAAA	-18	NA	111345240	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111423429_111423571_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.34	chr8	+	3230	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	139.592977781776	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCAAGTCTGCCTGCTC	7371	False	NA	12	True	AATAAA	-16	NA	111345240	111447026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111428737_111428913_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.36	chr8	+	2837	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	105.528875149433	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7371	False	NA	16	True	AATAAA	-20	NA	111345240	111447030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438_111446545_111446766
ES.33897.37	chr8	+	3272	20	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	140.032643602262	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGTCTGCCTGCTCC	7374	False	NA	13	True	AATAAA	-17	NA	111345243	111447027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111423347_111423571_111436953_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.38	chr8	+	2254	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	56	3700	47	-4	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAAAACAAAGGGTTAAT	7421	False	NA	NA	False	NA	NA	NA	111345290	111437311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
ES.33897.39	chr8	+	2819	18	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	66	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	145.351596156321	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATCAAGTCTGCCTGCT	7440	False	NA	11	True	AATAAA	-15	NA	111345309	111447025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379872_111380009_111380243_111380310_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.4	chr8	+	1360	9	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	-1	-71843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	157.172626035834	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGATGAACAGCAAACT	7346	False	NA	NA	False	CATAAA	-9	NA	111345215	111365472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111365364
ES.33897.40	chr8	+	5198	15	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	107	-15432	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	120.857754979875	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCCAAACCCACTCCC	7481	False	NA	NA	False	AATAAA	-16	NA	111345350	111421883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111418517
ES.33897.42	chr8	+	2012	14	NNC	ENSMUSG00000010936.12	novel	2605	18	NA	NA	13421	99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	125.638958643384	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAATGCATGACACCTC	NA	False	NA	NA	False	CATAAA	-21	NA	111358664	111437414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362015_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
ES.33897.43	chr8	+	2291	15	ISM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	15685	3	-11296	1	3prime_fragment	FALSE	canonical	3	368	junction_11	39.5921168199645	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAAGTCTGCCTGCTCC	NA	False	NA	13	True	AATAAA	-17	NA	111360915	111447027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.44	chr8	+	3300	11	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	-11281	-11830	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	138.489855224128	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAAGCACTGTCATCGTC	NA	False	NA	NA	False	AATAAA	-41	NA	111360930	111425485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111423347
ES.33897.45	chr8	+	8676	2	ISM	ENSMUSG00000010936.12	ENSMUST00000213015.2	2333	7	65103	-7448	65103	0	3prime_fragment	FALSE	canonical	3	370	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCAAGTCTGCCTGCTC	1478	False	NA	12	True	AATAAA	-16	NA	111437314	111447026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111438344_111439379
ES.33897.5	chr8	+	2430	15	ISM	ENSMUSG00000010936.12	ENSMUST00000212663.2	2605	18	-17	3597	1	99	5prime_fragment	FALSE	canonical	3	404	junction_10	33.1637864951196	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAATGCATGACACCTC	7348	False	NA	NA	False	CATAAA	-21	NA	111345217	111437414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949
ES.33897.6	chr8	+	2338	15	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	121.354031743524	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGGGTTAATTGCT	7348	False	NA	NA	False	NA	NA	NA	111345217	111437315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409268_111436953
ES.33897.7	chr8	+	2869	17	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	113.788575189911	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGTCTGCCTGCTCCT	7348	False	NA	14	True	AATAAA	-18	NA	111345217	111447028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.8	chr8	+	3009	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	106.024397378651	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGCCTGCTCCTTCTC	7348	False	NA	18	True	AATAAA	-22	NA	111345217	111447032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111360951_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ES.33897.9	chr8	+	5457	9	NNC	ENSMUSG00000010936.12	novel	2305	15	NA	NA	2	-67743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	157.172626035834	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATGGCTCCCTAATGT	7349	False	NA	NA	False	AATAAA	-25	NA	111345218	111369572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111365364
ES.33898.1	chr8	-	7849	1	Antisense	novelGene_ENSMUSG00000010936.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAACCAAAAGA	5521	False	NA	NA	False	NA	NA	NA	111416157	111408308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111408300_111416200
ES.33899.1	chr8	+	3473	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-213	1457	-213	8	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGTGGGGCAAGCTG	NA	False	NA	21	True	AATAAA	-22	NA	111447894	111466575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.10	chr8	+	4521	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-36	232	-36	-232	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTATTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	111448071	111467800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.13	chr8	+	4676	13	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	28.6224222517165	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448073	111468032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111464203_111464381_111464561_111464728_111464921
ES.33899.14	chr8	+	4547	12	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	38.2268133147186	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGCCCCGGCTTCCTCCT	NA	False	NA	4	True	AATAAA	-14	NA	111448081	111468029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453935_111454028_111454108_111454184_111455359_111455518_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.15	chr8	+	1516	10	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-22	378	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	27.4994949448571	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCATTGGTTTATCCAA	NA	False	NA	NA	False	CATAAA	-14	NA	111448085	111459020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593
ES.33899.16	chr8	+	5128	10	NNC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-22	-1562	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.4995854037363	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGTGTCTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	111448085	111462723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455354_111455518_111455801_111455910_111456654_111456753_111458689
ES.33899.18	chr8	+	4705	14	NNC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.1544766638099	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448090	111468032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464590_111464728_111464921
ES.33899.2	chr8	+	4926	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	-209	0	-209	0	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111447898	111468032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.20	chr8	+	3326	8	NNC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-4	-1279	intron_retention	FALSE	canonical	0	0	junction_6	37.5983065185285	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111448103	111457363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111454460_111455518_111455801
ES.33899.21	chr8	+	3137	13	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	2	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	28.9793988128732	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGTGGGGCAAGCTG	NA	False	NA	21	True	AATAAA	-22	NA	111448109	111466575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.22	chr8	+	4766	14	NNC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	28.1790555483613	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGCCCCGGCTTCCTCC	NA	False	NA	3	True	AATAAA	-13	NA	111448111	111468028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464864
ES.33899.23	chr8	+	3148	13	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	4	8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	28.8255047175626	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGTGGGGCAAGCTG	NA	False	NA	21	True	AATAAA	-22	NA	111448111	111466575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.24	chr8	+	2345	10	ISM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	9	8056	9	1334	5prime_fragment	FALSE	canonical	3	89	junction_6	9.56975688894866	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTCTGTGTCTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	111448116	111459976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689
ES.33899.27	chr8	+	4623	14	NNC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	113	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.5963104810909	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCCCCGGCTTCCTCCTG	NA	False	NA	5	True	AATAAA	-15	NA	111448220	111468030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453728_111453830_111453935_111454028_111454108_111454184_111455354_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.29	chr8	+	3853	7	ISM	ENSMUSG00000033763.15	ENSMUST00000144041.8	3225	14	3443	-1461	1812	-4	3prime_fragment	FALSE	canonical	3	80	junction_4	8.78287475083693	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGCCCCGGCTTCCTCC	NA	False	NA	3	True	AATAAA	-13	NA	111455800	111468028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.3	chr8	+	4809	13	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-200	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	28.8255047175626	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111447907	111468032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.30	chr8	+	3845	6	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	2663	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	27.4269940022599	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCCCCGGCTTCCTCCTG	NA	False	NA	5	True	AATAAA	-15	NA	111456651	111468030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.31	chr8	+	3659	4	ISM	ENSMUSG00000033763.15	ENSMUST00000144041.8	3225	14	11285	-1460	-106	-5	3prime_fragment	FALSE	canonical	3	80	junction_1	7.25718035235908	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAACGCCCCGGCTTCCTC	NA	False	NA	2	True	AATAAA	-12	NA	111463642	111468027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.4	chr8	+	3543	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-192	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAACTATGTGGGGCA	NA	False	NA	16	True	AATAAA	-17	NA	111447915	111466570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.5	chr8	+	2726	10	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-181	1429	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	27.4994949448571	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTAACTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	111447926	111460071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593
ES.33899.7	chr8	+	3221	13	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-51	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	28.4120230810049	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAACTATGTGGGGCA	NA	False	NA	16	True	AATAAA	-17	NA	111448056	111466570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.8	chr8	+	4861	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448059	111468032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.33899.9	chr8	+	4620	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	-37	-230	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	111448070	111467802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ES.339.1	chr1	+	157	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38229860	38230017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38229900_38230000
ES.3390.1	chr10	+	173	1	Intergenic	novelGene_2617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAAAGTCAGT	NA	False	NA	NA	False	NA	NA	NA	81307439	81307612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81307400_81307600
ES.33900.1	chr8	+	2079	2	NNC	ENSMUSG00000090039.2	novel	2067	3	NA	NA	515	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	111482138	111485602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111482555_111483939
ES.33900.2	chr8	+	2068	2	NNC	ENSMUSG00000090039.2	novel	2067	3	NA	NA	515	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	111482138	111485603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111482543_111483939
ES.33901.1	chr8	+	183	1	Intergenic	novelGene_27592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111489874	111490057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111489900_111490100
ES.33902.1	chr8	+	204	1	Intergenic	novelGene_27593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTCAAATTTCAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	111507496	111507700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111507500_111507700
ES.33902.2	chr8	+	507	1	Intergenic	novelGene_27594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGTGGGCTTAAAGAG	NA	False	NA	NA	False	NA	NA	NA	111507497	111508004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111507500_111508000
ES.33903.1	chr8	-	3789	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-16547	768	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	15.61694236683	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTCTGTGATGCAGG	NA	False	NA	0	True	NA	NA	NA	111485877	111467692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111484406
ES.33903.10	chr8	-	1690	7	NNC	ENSMUSG00000031750.16	novel	1796	8	NA	NA	-13305	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.5262576421203	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTTGCATCTCTGAT	NA	False	NA	-24	True	ATTAAA	-15	NA	111482635	111468472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111473449_111473568_111474874_111475037_111475294_111475373_111481926_111482283_111482403
ES.33903.2	chr8	-	3210	6	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13298	751	intron_retention	FALSE	canonical	3	22	junction_5	8.25590697622012	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTGAAGAAGCCCCCAAA	NA	False	NA	-17	True	NA	NA	NA	111482628	111467709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111476191_111481862_111482283_111482403
ES.33903.3	chr8	-	2530	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13322	731	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	7.54247233265651	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAAATAAAATG	NA	False	NA	-37	True	NA	NA	NA	111482652	111467729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482403
ES.33903.4	chr8	-	795	3	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-5700	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	18.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGATGGTGAACCTGG	NA	False	NA	-13	True	ATTAAA	-26	NA	111475030	111468461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111468965_111469275_111469412_111474874
ES.33903.5	chr8	-	1804	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-13291	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	15.2470397855525	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGATGGTGAACCTGG	NA	False	NA	-13	True	ATTAAA	-26	NA	111482621	111468461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111482366
ES.33903.6	chr8	-	1660	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-15702	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	17.6580167503476	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGCATCTCTGATGGT	NA	False	NA	-21	True	ATTAAA	-18	NA	111485032	111468469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475034_111475294_111475373_111476056_111476191_111481862_111482283_111484910
ES.33903.7	chr8	-	1680	7	NNC	ENSMUSG00000031750.16	novel	1709	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.925772879665	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	5056	False	NA	-23	True	ATTAAA	-16	NA	111532509	111468471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111474874_111475034_111475294_111475373_111476056_111476191_111481862_111482283_111532365
ES.33903.8	chr8	-	1597	7	NNC	ENSMUSG00000031750.16	novel	1796	8	NA	NA	-12895	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18.6614576065215	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	False	NA	-23	True	ATTAAA	-16	NA	111482225	111468471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111469081_111469275_111469412_111473449_111473568_111474874_111475034_111475294_111475373_111476056_111476191_111481862
ES.33903.9	chr8	-	790	1	NIC	ENSMUSG00000031750.16	novel	675	2	NA	NA	69	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	NA	False	NA	-23	True	ATTAAA	-16	NA	111469261	111468471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111468500_111469300
ES.33904.1	chr8	+	169	1	Intergenic	novelGene_27595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAATATATTGT	1527	False	NA	NA	False	NA	NA	NA	111541755	111541924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111541800_111541900
ES.33905.1	chr8	+	4473	6	Antisense	novelGene_ENSMUSG00000080518.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGGAATCATGGCT	39	False	NA	NA	False	NA	NA	NA	111562489	111571688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111564023_111564838_111564982_111566503_111566619_111567743_111567886_111568404_111568573_111569316
ES.33905.2	chr8	+	4327	5	Antisense	novelGene_ENSMUSG00000080518.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	45	False	NA	NA	False	NA	NA	NA	111562495	111571661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111564982_111566503_111566619_111567743_111568573_111569316_111569646_111571093
ES.33905.3	chr8	+	3168	1	Antisense	novelGene_ENSMUSG00000033732.11_AS_novelGene_ENSMUSG00000080518.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGAATCATGGCTCTCT	4487	False	NA	NA	False	NA	NA	NA	111568524	111571692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111568500_111571700
ES.33906.1	chr8	+	3274	19	FSM	ENSMUSG00000031753.17	ENSMUST00000165867.8	2442	19	-496	-336	-496	4	multi-exon	TRUE	canonical	0	0	junction_1	97.5620252220714	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTGGGTCCAGGAAG	8698	False	NA	17	True	AATAAA	-22	NA	111572735	111608863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111573445_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.11	chr8	+	2665	19	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	96.8073688655294	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACATGCCATTGTGTTGG	9628	False	NA	7	True	AATAAA	-12	NA	111573665	111608853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111573842_111576499_111576583_111578033_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.12	chr8	+	2578	18	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	130.376325148278	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATTGTGTTGGGTCC	9628	False	NA	11	True	AATAAA	-16	NA	111573665	111608857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111593192_111593360_111594871_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.14	chr8	+	2729	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	97.8323711227842	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGTTGGGTCCAGG	9629	False	NA	14	True	AATAAA	-19	NA	111573666	111608860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592616_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.15	chr8	+	2930	18	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	1	3	intron_retention	FALSE	non_canonical	0	0	junction_15	99.6759455317433	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATTGTGTTGGGTC	9629	False	NA	10	True	AATAAA	-15	NA	111573666	111608856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606359_111607226_111607609_111608002_111608132_111608362
ES.33906.16	chr8	+	5939	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	1	-3203	1	3203	multi-exon	FALSE	canonical	3	332	junction_8	32.668367302671	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACCAAATGAACTCGAA	9629	False	NA	NA	False	AATAAA	-18	NA	111573666	111612062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.17	chr8	+	6986	16	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_10	139.963550810758	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	9631	False	NA	8	True	AATAAA	-13	NA	111573668	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111586577_111589882_111593360_111594833_111595000_111600777_111600841_111605639_111605755_111606264_111606358_111607226_111607311_111607495_111607609_111608002_111608132_111608362
ES.33906.19	chr8	+	1532	11	ISM	ENSMUSG00000031753.17	ENSMUST00000174398.8	2292	18	-16	15088	-1	123	5prime_fragment	FALSE	canonical	3	332	junction_8	35.2981585921985	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTCTTATTTGTTT	9632	False	NA	NA	False	CATAAA	-15	NA	111573669	111593409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192
ES.33906.2	chr8	+	2776	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	-35	-4	-25	4	multi-exon	FALSE	canonical	3	332	junction_8	32.668367302671	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTGGGTCCAGGAAG	9593	False	NA	17	True	AATAAA	-22	NA	111573630	111608863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.23	chr8	+	2722	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	97.7231065590711	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTGTGTTGGGTCCA	9636	False	NA	12	True	AATAAA	-17	NA	111573673	111608858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111594994_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.24	chr8	+	3592	18	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	100.245511768646	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGACATGCCATTGTGTT	9636	False	NA	5	True	AATAAA	-10	NA	111573673	111608851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576497_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.25	chr8	+	2595	18	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_17	97.4916197268002	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	9636	False	NA	8	True	AATAAA	-13	NA	111573673	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608362
ES.33906.26	chr8	+	3789	17	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	3	1	intron_retention	FALSE	canonical	3	332	junction_8	33.4364485816003	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	9636	False	NA	8	True	AATAAA	-13	NA	111573673	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111607609_111608002_111608132_111608362
ES.33906.27	chr8	+	2693	10	NNC	ENSMUSG00000031753.17	novel	2292	18	NA	NA	3	123	intron_retention	FALSE	canonical	0	0	junction_1	124.264155116886	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTCTTATTTGTTT	9636	False	NA	NA	False	CATAAA	-15	NA	111573673	111593409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111574542_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608
ES.33906.28	chr8	+	2364	17	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	137.116952247889	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATTGTGTTGGGTC	9637	False	NA	10	True	AATAAA	-15	NA	111573674	111608856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.30	chr8	+	3421	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5620252220714	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGCCATTGTGTTGGGT	9640	False	NA	9	True	AATAAA	-14	NA	111573677	111608855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111574542_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.31	chr8	+	2882	18	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-3	1	intron_retention	FALSE	canonical	1	4	junction_11	98.6719074950906	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGTTGGGTCCAGG	9642	False	NA	14	True	AATAAA	-19	NA	111573679	111608860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594871_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607609_111608002_111608132_111608362
ES.33906.32	chr8	+	2802	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	97.557659430617	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	9658	False	NA	8	True	AATAAA	-13	NA	111573695	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594733_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.33	chr8	+	178	1	Intergenic	novelGene_27598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACAAGATGGCTA	279	False	NA	NA	False	NA	NA	NA	111582928	111583106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111582900_111583100
ES.33906.34	chr8	+	171	2	Intergenic	novelGene_27599	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAATTAAAAAAAAAGC	281	False	NA	NA	False	NA	NA	NA	111582930	111584112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111582980_111583990
ES.33906.35	chr8	+	176	2	Antisense	novelGene_ENSMUSG00000118587.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	607	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	281	False	NA	NA	False	NA	NA	NA	111582930	111721676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111582980_111721549
ES.33906.36	chr8	+	217	1	Intergenic	novelGene_27600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATCATTAGTG	1278	False	NA	NA	False	NA	NA	NA	111583927	111584144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111583900_111584100
ES.33906.37	chr8	+	4668	1	NIC	ENSMUSG00000031753.17	novel	2442	19	NA	NA	-786	327	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTCCAAATGCAACATC	6296	False	NA	NA	False	NA	NA	NA	111588945	111593613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111588900_111593600
ES.33906.38	chr8	+	1797	6	ISM	ENSMUSG00000031753.17	ENSMUST00000172542.2	1280	11	18367	-357	-2762	1	3prime_fragment	FALSE	canonical	3	401	junction_2	23.007824755939	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	8757	False	NA	8	True	AATAAA	-13	NA	111604857	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.39	chr8	+	124	1	Intergenic	novelGene_27602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	111618489	111618613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111618500_111618600
ES.33906.4	chr8	+	2739	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	93.9922015414964	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTGTGTTGGGTCCA	9619	False	NA	12	True	AATAAA	-17	NA	111573656	111608858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577973_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.40	chr8	+	155	1	Intergenic	novelGene_27603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9460	False	NA	NA	False	NA	NA	NA	111639310	111639465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111639300_111639500
ES.33906.41	chr8	+	3595	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-156	957	-156	-957	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCTTCCCAGTTTC	2881	False	NA	22	True	AATACA	-18	NA	111646397	111698155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.42	chr8	+	3942	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-148	602	-148	-602	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATCTGTTCTGAACTGC	2889	False	NA	NA	False	ATTAAA	-22	NA	111646405	111698510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.43	chr8	+	4562	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-144	-22	-144	22	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGTAGTAAGTAGTACT	2893	False	NA	NA	False	ATTAAA	-20	NA	111646409	111699134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.44	chr8	+	2582	4	NNC	ENSMUSG00000031749.13	novel	2177	6	NA	NA	-79	-6308	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.4788829431544	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTCCTTTGTTTGTTTGT	2958	False	NA	NA	False	AATAAA	-30	NA	111646474	111690147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688800_111688995_111689315
ES.33906.45	chr8	+	4691	7	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	-58	-609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.3931517731203	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	2979	False	NA	NA	False	ATTAAA	-15	NA	111646495	111698503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111695075_111695819_111695866_111696175_111696296_111696733
ES.33906.46	chr8	+	3775	7	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	-51	-612	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	33.1649915824905	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGAGTCACTCATCTGT	2986	False	NA	NA	False	ATTAAA	-12	NA	111646502	111698500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688860_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.47	chr8	+	8434	7	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	-46	-962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.7407061912487	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGTCTGTTCCTTCCCA	2991	False	NA	17	True	AATACA	-13	NA	111646507	111698150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688800_111693949_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.48	chr8	+	3360	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-39	1075	-39	-1075	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTTCACATTACCAAG	2998	False	NA	-96	True	CATAAA	-15	NA	111646514	111698037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.49	chr8	+	4012	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	-36	420	-36	-420	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGGTGGCATGTGCCCT	3001	False	NA	NA	False	TTTAAA	-25	NA	111646517	111698692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.5	chr8	+	3935	18	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	2	-1	intron_retention	FALSE	canonical	3	332	junction_7	32.8453437947685	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTGTGTTGGGTCCA	9620	False	NA	12	True	AATAAA	-17	NA	111573657	111608858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.50	chr8	+	2451	8	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	-30	-963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.4144084868291	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGAGTCTGTTCCTTCCC	3007	False	NA	16	True	AATACA	-12	NA	111646523	111698149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111683421_111684432_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.51	chr8	+	2485	5	NNC	ENSMUSG00000031749.13	novel	2177	6	NA	NA	8	-1196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.0031248779392	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAGTAGTAAGA	3045	False	NA	NA	False	NA	NA	NA	111646561	111695259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688800_111688995_111689315_111690128_111695249
ES.33906.52	chr8	+	2517	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	22	1857	-14	800	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACACTCTCCAGGGCTT	3059	False	NA	NA	False	AAGAAA	-12	NA	111646575	111697255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.53	chr8	+	3958	8	NIC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	-5	-610	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.0097170489235	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTCACTCATCTGTTC	3068	False	NA	NA	False	ATTAAA	-14	NA	111646584	111698502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111646738_111648040_111648244_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.54	chr8	+	3385	7	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	1	-964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.7407061912487	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGAGTCTGTTCCTTCC	3074	False	NA	15	True	AATACA	-11	NA	111646590	111698148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688800_111688995_111694058_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.55	chr8	+	3591	8	NIC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	9	-963	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	42.0097170489235	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGAGTCTGTTCCTTCCC	3082	False	NA	16	True	AATACA	-12	NA	111646598	111698149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111646738_111648040_111648244_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.56	chr8	+	3566	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	57	773	21	-773	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAGAAGAGTAATTTATT	3094	False	NA	NA	False	NA	NA	NA	111646610	111698339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.57	chr8	+	4006	8	NNC	ENSMUSG00000031749.13	novel	4396	7	NA	NA	93	-609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.837879526397	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCACTCATCTGTTCT	3166	False	NA	NA	False	ATTAAA	-15	NA	111646682	111698503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111646738_111683389_111684683_111688370_111688719_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.58	chr8	+	2356	5	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	42200	610	21218	-610	3prime_fragment	FALSE	canonical	3	87	junction_1	5.93190525885234	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTCACTCATCTGTTC	93	False	NA	NA	False	ATTAAA	-14	NA	111688753	111698502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ES.33906.59	chr8	+	177	1	Intergenic	novelGene_27609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	111721499	111721676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111721500_111721700
ES.33906.6	chr8	+	5794	17	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_13	102.69060022709	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATTGTGTTGGGTCCA	9623	False	NA	12	True	AATAAA	-17	NA	111573660	111608858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607230_111607311_111607506_111607609_111608002_111608132_111608362
ES.33906.7	chr8	+	2750	19	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	97.0234794034699	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCATTGTGTTGGGTC	9623	False	NA	10	True	AATAAA	-15	NA	111573660	111608856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607495_111607609_111608002_111608132_111608362
ES.33906.9	chr8	+	3760	17	NNC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	-1	1	intron_retention	FALSE	canonical	1	4	junction_11	101.517682419123	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	9627	False	NA	8	True	AATAAA	-13	NA	111573664	111608854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594871_111595000_111600777_111600841_111605637_111605755_111606264_111607609_111608002_111608132_111608362
ES.33907.1	chr8	-	4947	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	2	441	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_25	162.261990620108	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCCTAAATGAACTAAA	NA	False	NA	NA	False	NA	NA	NA	111573417	111536429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.10	chr8	-	4516	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	177.469159010798	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTTTGCCACTGTGA	NA	False	NA	-19	True	ATTAAA	-21	NA	111573413	111536871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569639_111571099_111571232_111573306
ES.33907.100	chr8	-	4207	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	177.602684664394	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTGCGTGTGTAGTTT	NA	False	NA	-31	True	TATAAA	-14	NA	111573412	111537126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552199_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.101	chr8	-	9048	3	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	18264	-257	intron_retention	FALSE	canonical	3	858	junction_1	9.5	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTGCGTGTGTAGTT	NA	False	NA	-32	True	TATAAA	-13	NA	111546964	111537127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111540468_111541161_111542692_111542786
ES.33907.104	chr8	-	4182	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-19	362	-8	-362	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAGAGATGAAGGGAG	NA	False	NA	-137	True	AATACA	-16	NA	111573427	111537232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.105	chr8	-	5375	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-364	intron_retention	FALSE	canonical	3	77	junction_15	204.661648581262	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGAGATGAAGGG	NA	False	NA	-139	True	AATACA	-14	NA	111573412	111537234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.106	chr8	-	2193	14	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	21230	498	13050	-498	3prime_fragment	FALSE	canonical	3	599	junction_12	113.698396839124	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTTCGGTGTGGAACA	9878	False	NA	NA	False	NA	NA	NA	111552178	111537368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133
ES.33907.107	chr8	-	2780	1	FSM	ENSMUSG00000033732.11	ENSMUST00000212613.2	4490	1	1699	11	1699	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111569990	111567210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111567200_111570000
ES.33907.108	chr8	-	1475	1	FSM	ENSMUSG00000033732.11	ENSMUST00000212843.2	1409	1	-66	0	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	638	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAAAGGCACGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	111573425	111571950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111572000_111573400
ES.33907.11	chr8	-	7828	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_15	165.567851952002	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTTTGCCACTGTG	NA	False	NA	-20	True	ATTAAA	-20	NA	111573412	111536872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.12	chr8	-	4465	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-44	104	-33	-104	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTTGGTTCTTTGCT	NA	False	NA	-122	True	NA	NA	NA	111573452	111536974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.13	chr8	-	4498	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-220	247	-209	-247	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTAGTTTTTGTTGTTT	NA	False	NA	-22	True	TATAAA	-23	NA	111573628	111537117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.14	chr8	-	6229	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-6	-250	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_25	202.643134598732	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTAGTTTTTGTTG	NA	False	NA	-25	True	TATAAA	-20	NA	111573425	111537120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.16	chr8	-	4195	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	276.660878333023	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTAGTTTTTGTT	NA	False	NA	-26	True	TATAAA	-19	NA	111573412	111537121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541157_111541241_111542534_111542692_111542798_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.17	chr8	-	8118	13	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	8024	-251	intron_retention	FALSE	canonical	3	599	junction_10	108.739335364695	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTAGTTTTTGTT	5334	False	NA	-26	True	TATAAA	-19	NA	111557204	111537121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726
ES.33907.19	chr8	-	4837	25	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-251	intron_retention	FALSE	canonical	3	597	junction_22	102.950626988	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTAGTTTTTGTT	NA	False	NA	-26	True	TATAAA	-19	NA	111573413	111537121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.2	chr8	-	4969	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-5	-439	-5	439	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTGCCTAAATGAACTA	NA	False	NA	NA	False	NA	NA	NA	111573413	111536431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.20	chr8	-	5991	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	12	-251	intron_retention	FALSE	canonical	3	77	junction_15	208.860495540019	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTAGTTTTTGTT	NA	False	NA	-26	True	TATAAA	-19	NA	111573396	111537121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.21	chr8	-	4413	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	178.034585404073	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573420	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573178
ES.33907.22	chr8	-	4760	25	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-252	intron_retention	FALSE	canonical	3	597	junction_22	100.740453090548	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573412	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.23	chr8	-	4275	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-19	-252	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_25	162.261990620108	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573438	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.24	chr8	-	5619	24	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-252	intron_retention	FALSE	canonical	3	597	junction_21	100.697022593363	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573412	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.26	chr8	-	6185	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-252	intron_retention	FALSE	canonical	3	77	junction_14	206.348595962162	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573412	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542993_111544175_111544351_111547338_111547494_111548099_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.27	chr8	-	4736	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	3	-252	intron_retention	FALSE	canonical	3	100	junction_24	163.05349646154	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573416	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.28	chr8	-	4306	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-27	-252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	265.958977127663	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTGTAGTTTTTGT	NA	False	NA	-27	True	TATAAA	-18	NA	111573446	111537122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548217_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.29	chr8	-	3878	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	2603	-253	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	250.295533653053	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111569086	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111568943
ES.33907.3	chr8	-	5240	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-6	21	intron_retention	FALSE	canonical	2	11	junction_16	213.630709402932	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGAATGTTATATTTGG	NA	False	NA	3	True	ATTAAA	-43	NA	111573425	111536849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556309_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.30	chr8	-	5738	23	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	554	-253	intron_retention	FALSE	canonical	3	597	junction_21	104.20953938663	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111571135	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094
ES.33907.31	chr8	-	4767	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	100	junction_24	165.586075090537	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.32	chr8	-	4924	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-6	-253	intron_retention	FALSE	non_canonical	0	0	junction_7	274.712807127735	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573425	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542999_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
ES.33907.33	chr8	-	4136	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	4	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	174.672068061687	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573404	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569438_111569569_111569647_111571094_111571232_111573306
ES.33907.34	chr8	-	4168	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	246.883894978996	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.35	chr8	-	5977	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-253	intron_retention	FALSE	canonical	3	77	junction_14	205.986544699459	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573420	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.37	chr8	-	6089	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	77	junction_15	205.406858697562	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.38	chr8	-	4401	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	174.818195849288	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573420	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
ES.33907.39	chr8	-	6459	23	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	597	junction_20	104.594583318182	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.4	chr8	-	5500	20	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	246	3	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_15	181.000283129819	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGCCACTGTGAAATC	NA	False	NA	-15	True	ATTAAA	-25	NA	111564982	111536867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843
ES.33907.40	chr8	-	4788	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	77	junction_15	202.704924459175	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.41	chr8	-	7941	24	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	103	junction_14	167.897720688747	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.42	chr8	-	4425	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	4	-253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_26	240.085552429144	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573415	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
ES.33907.45	chr8	-	5821	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-15	-253	intron_retention	FALSE	canonical	3	77	junction_16	236.665549668726	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573434	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.46	chr8	-	4060	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	284.87945793889	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560504_111562180_111562347_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.47	chr8	-	6042	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	intron_retention	FALSE	canonical	3	77	junction_14	207.744129312693	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573408	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111540468_111541161_111541288_111542534_111542692_111542786_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.48	chr8	-	6492	24	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	3	-253	intron_retention	FALSE	canonical	3	77	junction_14	210.367991556357	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573416	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.49	chr8	-	5196	24	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	597	junction_21	98.9107214252047	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.5	chr8	-	4536	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-9	-2	2	2	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGCCACTGTGAAAT	NA	False	NA	-16	True	ATTAAA	-24	NA	111573417	111536868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.50	chr8	-	7422	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	103	junction_14	164.379874241209	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.51	chr8	-	7153	24	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	intron_retention	FALSE	canonical	3	77	junction_13	209.678104179718	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.52	chr8	-	4741	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-20	-253	intron_retention	FALSE	canonical	3	77	junction_15	233.176005626651	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573439	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.53	chr8	-	4306	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	201.421663160973	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.54	chr8	-	5651	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-186	-253	intron_retention	FALSE	canonical	3	77	junction_15	235.629016888837	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573605	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.55	chr8	-	9638	21	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	intron_retention	FALSE	canonical	3	77	junction_10	220.236117610169	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111544351_111547338_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.56	chr8	-	4264	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.906691789768	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573413	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542547_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.6	chr8	-	5051	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	2	intron_retention	FALSE	canonical	3	77	junction_15	202.704924459175	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGCCACTGTGAAAT	NA	False	NA	-16	True	ATTAAA	-24	NA	111573420	111536868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.60	chr8	-	10046	23	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	1	-253	intron_retention	FALSE	canonical	3	77	junction_13	214.931913109076	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573407	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.61	chr8	-	7194	24	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	1	-253	intron_retention	FALSE	canonical	3	77	junction_14	212.507987173368	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573418	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.62	chr8	-	6724	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	intron_retention	FALSE	canonical	3	103	junction_14	162.343509049655	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.63	chr8	-	4290	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	175.220802417978	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573420	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552720_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.65	chr8	-	4950	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-253	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	177.873096335562	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573412	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111572632
ES.33907.66	chr8	-	4882	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	3	-253	intron_retention	FALSE	canonical	2	11	junction_15	240.565646757803	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573405	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556309_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.67	chr8	-	5335	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	3	-253	intron_retention	FALSE	canonical	1	1	junction_9	250.501330668455	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573416	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.68	chr8	-	11480	18	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-15	-253	intron_retention	FALSE	canonical	3	77	junction_9	236.186557545932	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573434	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111540468_111541161_111541288_111542534_111544351_111547338_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111569647_111571094_111571232_111573306
ES.33907.69	chr8	-	4307	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-23	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	232.071469939248	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573442	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
ES.33907.70	chr8	-	4575	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-14	-253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	178.034585404073	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573373	111537123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111572968
ES.33907.71	chr8	-	4149	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-254	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	246.481531965379	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	NA	False	NA	-29	True	TATAAA	-16	NA	111573412	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.73	chr8	-	7906	14	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	7633	-254	intron_retention	FALSE	non_canonical	0	0	junction_7	234.318475432464	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	4943	False	NA	-29	True	TATAAA	-16	NA	111557595	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542999_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726
ES.33907.74	chr8	-	6248	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-254	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_15	161.539959143241	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	NA	False	NA	-29	True	TATAAA	-16	NA	111573420	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.75	chr8	-	6379	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-254	intron_retention	FALSE	canonical	3	77	junction_16	205.400315481744	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	NA	False	NA	-29	True	TATAAA	-16	NA	111573412	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094
ES.33907.76	chr8	-	5469	25	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-6	-254	intron_retention	FALSE	canonical	3	597	junction_22	103.263946798161	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	NA	False	NA	-29	True	TATAAA	-16	NA	111573425	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.77	chr8	-	4749	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-1	-254	intron_retention	FALSE	canonical	3	77	junction_15	202.252412593769	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCGTGTGTAGTTTTT	NA	False	NA	-29	True	TATAAA	-16	NA	111573420	111537124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.79	chr8	-	4509	28	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	269.395594400834	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573413	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111572632_111572838_111573306
ES.33907.8	chr8	-	4559	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	201.421663160973	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTTGCCACTGTGAAA	NA	False	NA	-17	True	ATTAAA	-23	NA	111573412	111536869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.80	chr8	-	4432	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-255	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_16	209.499445706855	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573412	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556309_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.84	chr8	-	8250	23	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-255	intron_retention	FALSE	canonical	3	599	junction_11	102.022127319567	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573412	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111571232_111573306
ES.33907.86	chr8	-	4794	25	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-255	intron_retention	FALSE	canonical	3	597	junction_22	103.296095440889	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573413	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.89	chr8	-	5962	24	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	8	-255	intron_retention	FALSE	canonical	3	597	junction_21	105.223050512558	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573400	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.9	chr8	-	5863	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-258	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	178.12737015967	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTTTTGCCACTGTGA	NA	False	NA	-19	True	ATTAAA	-21	NA	111573677	111536871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111546268_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.92	chr8	-	3611	23	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-255	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	187.36507542123	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573412	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564875_111569447_111569647_111571094_111571232_111573306
ES.33907.94	chr8	-	5887	24	NIC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	1	-255	intron_retention	FALSE	canonical	3	597	junction_21	101.778513373398	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573407	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.95	chr8	-	5344	25	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-4	-255	intron_retention	FALSE	canonical	3	77	junction_14	205.647651572349	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573412	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538755_111539597_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33907.98	chr8	-	5485	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	-5	-255	intron_retention	FALSE	canonical	3	77	junction_15	204.661648581262	819	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCGTGTGTAGTTTT	NA	False	NA	-30	True	TATAAA	-15	NA	111573413	111537125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ES.33908.1	chr8	-	172	1	Intergenic	novelGene_27596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCAAAGCAC	NA	False	NA	NA	False	NA	NA	NA	111578699	111578527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111578500_111578700
ES.33909.1	chr8	-	177	1	Intergenic	novelGene_27597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111581711	111581534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111581500_111581700
ES.3391.1	chr10	-	3077	14	NNC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-3	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	120.38110095632	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGAACCCTGCTCCTC	NA	False	NA	NA	False	ATTAAA	-20	NA	81332179	81322080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326056_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.10	chr10	-	5038	11	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-19	21	intron_retention	FALSE	canonical	3	345	junction_10	35.1921866328309	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCACTATTGTGCTGC	NA	False	NA	-9	True	AATAAA	-39	NA	81332245	81322269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.11	chr10	-	2981	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	1	3	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGGTGTCCTGAGGAA	NA	False	NA	-27	True	AATAAA	-21	NA	81332225	81322287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.12	chr10	-	7292	8	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	20	2	intron_retention	FALSE	canonical	3	251	junction_2	58.9209085926868	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCAGGTGTCCTGAGGA	NA	False	NA	-28	True	AATAAA	-20	NA	81332206	81322288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81327892_81328661_81328757_81328896
ES.3391.13	chr10	-	6106	9	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	2071	2	intron_retention	FALSE	canonical	3	382	junction_8	27.0736841785524	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCAGGTGTCCTGAGGA	NA	False	NA	-28	True	AATAAA	-20	NA	81330089	81322288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81325955_81326060_81327892_81328661_81328757_81328896_81329042_81329182
ES.3391.14	chr10	-	3733	13	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-21	1	intron_retention	FALSE	canonical	3	153	junction_4	79.7562258106259	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGGTGTCCTGAGG	NA	False	NA	-29	True	AATAAA	-19	NA	81332197	81322289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.15	chr10	-	4116	12	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	1	intron_retention	FALSE	canonical	3	345	junction_11	33.6562594720936	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGGTGTCCTGAGG	NA	False	NA	-29	True	AATAAA	-19	NA	81332197	81322289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.16	chr10	-	4450	11	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	1892	1	intron_retention	FALSE	canonical	3	153	junction_4	85.803496432255	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCAGGTGTCCTGAGG	NA	False	NA	-29	True	AATAAA	-19	NA	81330268	81322289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182
ES.3391.17	chr10	-	3017	13	NNC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_5	119.745215631635	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332196	81322290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324539_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.18	chr10	-	5158	9	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	19	-1	intron_retention	FALSE	canonical	3	345	junction_8	33.2180297428972	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCAGGTGTCCTGA	NA	False	NA	-31	True	AATAAA	-17	NA	81332207	81322291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323593_81323680_81323735_81324028_81324301_81324382_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.19	chr10	-	1511	5	NNC	ENSMUSG00000020238.15	novel	844	4	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	193.457198108522	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCAGGTGTCCTGA	NA	False	NA	-31	True	AATAAA	-17	NA	81332142	81322291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324130_81332013
ES.3391.2	chr10	-	3356	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	-416	178	-416	30	multi-exon	FALSE	canonical	3	251	junction_4	53.9264236863306	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGCTGCTGTCCTTGG	NA	False	NA	0	True	NA	NA	NA	81332642	81322260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.20	chr10	-	5359	9	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	20	-1	intron_retention	FALSE	canonical	3	345	junction_8	28.1599782492814	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCAGGTGTCCTGA	NA	False	NA	-31	True	AATAAA	-17	NA	81332206	81322291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.22	chr10	-	2808	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	117.163792046292	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81332206	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.23	chr10	-	2903	14	NNC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	120.26543621477	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81332195	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324473_81325610_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.25	chr10	-	5109	10	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	-3	intron_retention	FALSE	canonical	3	345	junction_9	35.5152549383125	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81332197	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81324301_81324382_81325955_81326060_81326150_81327003_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.26	chr10	-	2599	5	NIC	ENSMUSG00000020238.15	novel	655	6	NA	NA	677	-3	intron_retention	FALSE	canonical	3	251	junction_3	76.4346125783339	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81325425	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382
ES.3391.28	chr10	-	2852	14	NNC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	128.945334961308	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81332196	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327870_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.29	chr10	-	2779	13	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	131.631086964879	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCCTCCAGGTGTCCT	NA	False	NA	-33	True	AATAAA	-15	NA	81332182	81322293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.3	chr10	-	3832	12	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	28	intron_retention	FALSE	canonical	3	345	junction_11	33.8721465816619	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTGCTGCTGTCCTT	NA	False	NA	-2	True	NA	NA	NA	81332197	81322262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.30	chr10	-	2882	14	NNC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.213152320561	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGCCTCCAGGTGTCC	NA	False	NA	-34	True	AATAAA	-14	NA	81332196	81322294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323446_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.31	chr10	-	4170	14	NNC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-19	-4	intron_retention	FALSE	canonical	0	0	junction_7	161.479000045273	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGCCTCCAGGTGTCC	NA	False	NA	-34	True	AATAAA	-14	NA	81332195	81322294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81325955_81326060_81326150_81326457_81326591_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.33	chr10	-	2975	12	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	7	-5	intron_retention	FALSE	canonical	3	345	junction_11	29.0029921511386	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCGAGCCTCCAGGTGTC	NA	False	NA	-35	True	AATAAA	-13	NA	81332153	81322295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.35	chr10	-	4197	11	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-20	-5	intron_retention	FALSE	canonical	3	345	junction_10	33.9888216918445	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCGAGCCTCCAGGTGTC	NA	False	NA	-35	True	AATAAA	-13	NA	81332196	81322295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323735_81324028_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.37	chr10	-	4037	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-19	-7	intron_retention	FALSE	canonical	3	251	junction_4	56.1270260708293	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCGAGCCTCCAGGTG	NA	False	NA	-37	True	AATAAA	-11	NA	81332195	81322297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.39	chr10	-	3013	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	-9	intron_retention	FALSE	canonical	3	251	junction_4	55.7620814014526	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGACCGAGCCTCCAGG	NA	False	NA	-39	True	AATAAA	-9	NA	81332197	81322299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329374_81331913
ES.3391.4	chr10	-	2535	2	ISM	ENSMUSG00000020238.15	ENSMUST00000130400.2	690	4	1223	-1797	-402	28	3prime_fragment	FALSE	canonical	3	414	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTGCTGCTGTCCTT	NA	False	NA	-2	True	NA	NA	NA	81324879	81322262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81324301_81324382
ES.3391.40	chr10	-	5091	9	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	3	-10	intron_retention	FALSE	canonical	3	345	junction_8	33.8246858817639	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGACCGAGCCTCCAG	NA	False	NA	-40	True	AATAAA	-8	NA	81332173	81322300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323593_81323680_81323735_81324028_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.5	chr10	-	4908	12	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	-4	28	intron_retention	FALSE	canonical	3	153	junction_4	83.2706430862642	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTGCTGCTGTCCTT	NA	False	NA	-2	True	NA	NA	NA	81332180	81322262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.6	chr10	-	2993	15	NNC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	-21	28	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	148.434569519945	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTGTGCTGCTGTCCTT	NA	False	NA	-2	True	NA	NA	NA	81332197	81322262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327207_81327292_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ES.3391.7	chr10	-	5434	13	ISM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	41	183	-9	25	intron_retention	FALSE	canonical	3	251	junction_4	53.3242179710328	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTATTGTGCTGCTGTC	NA	False	NA	-5	True	AATAAA	-43	NA	81332185	81322265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182
ES.33910.1	chr8	-	178	1	Intergenic	novelGene_27601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAGAGACAGGGT	NA	False	NA	NA	False	NA	NA	NA	111588393	111588215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111588200_111588400
ES.33911.1	chr8	-	3408	17	NIC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	4496	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_14	41.1802440497868	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTTTGCTGGGAGAA	8698	False	NA	4	True	AATAAA	-30	NA	111621636	111609083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111620270_111620391_111620897_111620979_111621360
ES.33911.12	chr8	-	4210	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	94	junction_22	12.6085370527897	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1252	False	NA	-12	True	AATAAA	-14	NA	111629082	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.13	chr8	-	3279	22	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	35.946546357214	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1254	False	NA	-12	True	AATAAA	-14	NA	111629080	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.15	chr8	-	3577	23	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.4239513814942	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1255	False	NA	-12	True	AATAAA	-14	NA	111629079	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111609940_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.16	chr8	-	3467	21	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	37.1239477965369	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1234	False	NA	-12	True	AATAAA	-14	NA	111629100	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111626464_111626570_111629053
ES.33911.17	chr8	-	3739	24	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	25.8750085614079	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1250	False	NA	-12	True	AATAAA	-14	NA	111629084	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615835_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.18	chr8	-	3604	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-4	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	25.2077319897312	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTTCAGAAAACTGT	1250	False	NA	-12	True	AATAAA	-14	NA	111629084	111609099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.2	chr8	-	3885	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	-36	-11	-7	4	multi-exon	FALSE	canonical	3	94	junction_23	12.3354193641104	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTTTGCTGGGAGAA	1207	False	NA	4	True	AATAAA	-30	NA	111629127	111609083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.21	chr8	-	3766	24	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.1757185568223	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1254	False	NA	-14	True	AATAAA	-12	NA	111629080	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613265_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.22	chr8	-	3814	24	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	25.3487582795252	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1254	False	NA	-14	True	AATAAA	-12	NA	111629080	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614505_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.24	chr8	-	3994	24	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	26.5403356042959	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1254	False	NA	-14	True	AATAAA	-12	NA	111629080	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620723_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.26	chr8	-	4447	22	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	-7	intron_retention	FALSE	canonical	3	94	junction_21	12.4539969815448	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1255	False	NA	-14	True	AATAAA	-12	NA	111629079	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.27	chr8	-	3804	24	NNC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.6770681404933	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1255	False	NA	-14	True	AATAAA	-12	NA	111629079	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615556_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620906_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.28	chr8	-	4306	23	NNC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	-4	-7	intron_retention	FALSE	canonical	0	0	junction_21	40.7520217011043	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1250	False	NA	-14	True	AATAAA	-12	NA	111629084	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614505_111615550_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626460_111626570_111629053
ES.33911.29	chr8	-	4713	22	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-7	intron_retention	FALSE	canonical	3	94	junction_21	12.5456084049134	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1254	False	NA	-14	True	AATAAA	-12	NA	111629080	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.3	chr8	-	3717	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	26.9402460921227	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTTTGCTGGGAGAA	1255	False	NA	4	True	AATAAA	-30	NA	111629079	111609083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.30	chr8	-	7417	21	NIC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_8	27.4362898366379	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1255	False	NA	-14	True	AATAAA	-12	NA	111629079	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.31	chr8	-	6421	16	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	4063	-7	intron_retention	FALSE	canonical	3	101	junction_6	11.6072774106975	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	8265	False	NA	-14	True	AATAAA	-12	NA	111622069	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901
ES.33911.32	chr8	-	5246	22	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-7	intron_retention	FALSE	canonical	3	94	junction_21	12.7313066022484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1254	False	NA	-14	True	AATAAA	-12	NA	111629080	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.33	chr8	-	3917	24	FSM	ENSMUSG00000033703.10	ENSMUST00000212971.2	3972	24	41	14	1	-7	multi-exon	FALSE	canonical	1	1	junction_11	26.4236961878319	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1255	False	NA	-14	True	AATAAA	-12	NA	111629079	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.36	chr8	-	4749	21	NIC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_8	27.7883068933679	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	1255	False	NA	-14	True	AATAAA	-12	NA	111629079	111609101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111614154_111614299_111614511_111615550_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.37	chr8	-	2250	3	NIC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	14300	-9	intron_retention	FALSE	canonical	3	121	junction_2	8.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTGTCTTCAGAAAA	NA	False	NA	-16	True	AATAAA	-10	NA	111611832	111609103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111610084_111610472_111610573_111610662
ES.33911.38	chr8	-	4386	22	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	94	junction_21	12.6922405634916	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTGTCTTCAGAAAA	1250	False	NA	-16	True	AATAAA	-10	NA	111629084	111609103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.39	chr8	-	2387	3	ISM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	17063	17	14104	-17	intron_retention	FALSE	canonical	3	122	junction_1	8	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTTTCAAGTTTGTCT	NA	False	NA	-24	True	AATAAA	-2	NA	111612028	111609111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_111609719_111609859_111610084_111610472
ES.33911.4	chr8	-	5375	19	NNC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	4107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6442729934211	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTTTTTTGCTGGG	8309	False	NA	0	True	AATAAA	-26	NA	111622025	111609087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111612791_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615835_111616307_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901
ES.33911.5	chr8	-	4277	23	NIC	ENSMUSG00000033703.10	novel	3972	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_22	12.3619651276883	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTTTTTTGCTGGG	1254	False	NA	0	True	AATAAA	-26	NA	111629080	111609087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.6	chr8	-	4312	21	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_13	28.014282071829	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAACTGTTTTTTTGCT	1254	False	NA	-3	True	AATAAA	-23	NA	111629080	111609090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111620270_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33911.7	chr8	-	5190	17	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	3121	0	intron_retention	FALSE	canonical	3	101	junction_7	12.0414323794971	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAAAACTGTTTTTT	7323	False	NA	-7	True	AATAAA	-19	NA	111623011	111609094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901_111621975_111622515
ES.33911.9	chr8	-	4331	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	1	-2	intron_retention	FALSE	canonical	3	94	junction_22	12.265654527653	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCAGAAAACTGTTTT	1255	False	NA	-9	True	AATAAA	-17	NA	111629079	111609096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ES.33912.1	chr8	-	166	1	Intergenic	novelGene_27604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACATCTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	111654373	111654207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111654200_111654400
ES.33913.1	chr8	-	175	1	Intergenic	novelGene_27605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	111657229	111657054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111657100_111657200
ES.33914.1	chr8	-	2542	1	Antisense	novelGene_ENSMUSG00000031749.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCCAACCCAGCCC	NA	False	NA	NA	False	NA	NA	NA	111668538	111665996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111666000_111668500
ES.33915.1	chr8	-	174	1	Intergenic	novelGene_27606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	111668768	111668594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111668600_111668800
ES.33916.1	chr8	-	158	1	Intergenic	novelGene_27607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	111674844	111674686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111674700_111674800
ES.33917.1	chr8	-	177	1	Intergenic	novelGene_27608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	9429	False	NA	NA	False	NA	NA	NA	111680158	111679981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111680000_111680200
ES.33918.1	chr8	-	5306	2	Antisense	novelGene_ENSMUSG00000031749.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTGTGTGCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	111696945	111691221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111696314_111696731
ES.33918.2	chr8	-	2275	3	Antisense	novelGene_ENSMUSG00000031749.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTGTGTGTGCTTG	NA	False	NA	NA	False	NA	NA	NA	111696939	111691224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_111693138_111696159_111696314_111696731
ES.33919.1	chr8	-	3509	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-10	-952	-10	952	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTTCATTTAGATCT	7676	False	NA	NA	False	ATTAAA	-22	NA	111724442	111700675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.10	chr8	-	2757	14	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	167.78300299695	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGTGTACACTTGA	7691	False	NA	-26	True	ATTAAA	-12	NA	111724427	111701625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111716242_111717108_111717160_111719688_111719738_111721780_111721933_111724298
ES.33919.11	chr8	-	2644	13	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.745193085962	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTTGTGTACACTTG	7655	False	NA	-27	True	ATTAAA	-11	NA	111724463	111701626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703056_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.12	chr8	-	2489	11	NIC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	-34	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	114.491047684961	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTTGTGTACACTTG	7652	False	NA	-27	True	ATTAAA	-11	NA	111724466	111701626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.13	chr8	-	3472	12	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	4	1	intron_retention	FALSE	canonical	2	4	junction_8	142.753732347612	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTTGTGTACACTTG	7690	False	NA	-27	True	ATTAAA	-11	NA	111724428	111701626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111717160_111719688_111719738_111724298
ES.33919.14	chr8	-	5090	12	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_10	143.59878679936	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTGTGTACACTT	7691	False	NA	-28	True	ATTAAA	-10	NA	111724427	111701627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111720744_111722721_111723011_111723375
ES.33919.16	chr8	-	3887	11	NIC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	259	junction_7	45.0911299481395	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTGTGTACACTT	7685	False	NA	-28	True	ATTAAA	-10	NA	111724433	111701627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.17	chr8	-	2480	11	NIC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	114.881852352754	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTGTGTACACTT	7704	False	NA	-28	True	ATTAAA	-10	NA	111724414	111701627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111724298
ES.33919.18	chr8	-	2479	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-31	99	-31	-99	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTAGAAACTTTAATTAT	7655	False	NA	-52	True	TATAAA	-18	NA	111724463	111701726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.19	chr8	-	1998	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	22	527	-8	-527	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCATAGAGGTCAGGAGA	7708	False	NA	NA	False	AATAAA	-15	NA	111724410	111702154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.2	chr8	-	3048	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-38	-463	-38	463	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGTACTGGCTGTAT	7648	False	NA	-8	True	TTTAAA	-12	NA	111724470	111701164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.20	chr8	-	1723	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-8	832	-8	-832	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCCTGGCTTGGTGTGGT	7678	False	NA	NA	False	NA	NA	NA	111724440	111702459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.21	chr8	-	811	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	-25	-55	5	55	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTGTGTCATGGGCTT	7691	False	NA	NA	False	AATAAA	-23	NA	111724427	111707049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.3	chr8	-	4660	10	NIC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	5	449	intron_retention	FALSE	canonical	3	259	junction_6	47.4531607918356	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATGTATAGTGTT	7691	False	NA	-22	True	NA	NA	NA	111724427	111701178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.4	chr8	-	3052	13	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	5	449	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	137.243295727778	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTATGTATAGTGTT	7691	False	NA	-22	True	NA	NA	NA	111724427	111701178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.33919.5	chr8	-	3000	12	NNC	ENSMUSG00000015023.8	novel	2547	12	NA	NA	5	446	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	163.791138924188	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTATGTATAGT	7691	False	NA	-25	True	NA	NA	NA	111724427	111701181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111715171_111715233_111716105_111716242_111717108_111717160_111724298
ES.33919.9	chr8	-	2571	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	-19	-5	-19	5	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTACACTTGAGGC	7667	False	NA	-23	True	ATTAAA	-15	NA	111724451	111701622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ES.3392.1	chr10	+	177	1	Intergenic	novelGene_2618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATAGAGACGTTG	1879	False	NA	NA	False	NA	NA	NA	81342737	81342914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81342700_81342900
ES.33920.1	chr8	+	184	1	Intergenic	novelGene_27610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAGAACGCTCT	NA	False	NA	NA	False	NA	NA	NA	111724878	111725062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111724900_111725100
ES.33921.1	chr8	+	186	1	Intergenic	novelGene_27611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCAATGGC	NA	False	NA	NA	False	NA	NA	NA	111749316	111749502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111749300_111749500
ES.33922.1	chr8	+	238	1	Intergenic	novelGene_27612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTCAAAGTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111753459	111753697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111753500_111753700
ES.33923.1	chr8	+	4045	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3402	-2087	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1049.70561398568	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGCTCTGCTTCTT	NA	False	NA	24	True	AATAAA	-26	NA	111756373	111782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759816_111760174_111760271_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.10	chr8	+	3914	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3359	-2097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1050.44141843023	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111756416	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759816_111760174_111760349_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.100	chr8	+	4616	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-1	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	792.686438637624	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760546	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.105	chr8	+	3633	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-1	-2097	at_least_one_novel_splicesite	FALSE	canonical	2	88	junction_20	766.189067724149	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760546	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781657
ES.33923.107	chr8	+	6282	17	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2099	intron_retention	FALSE	non_canonical	0	0	junction_14	847.272736398233	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760547	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111780844_111781140
ES.33923.108	chr8	+	4735	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	792.686438637624	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760547	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778260_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.11	chr8	+	3339	21	NNC	ENSMUSG00000031960.15	novel	659	3	NA	NA	-3349	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1001.8344174563	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111756426	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111763540_111763706_111766763_111766953_111767228_111767375_111768124_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.110	chr8	+	5340	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1	-76	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	3220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATGACTGGAAATAC	NA	False	NA	-6	True	AGTAAA	-11	NA	111760548	111784220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.111	chr8	+	5006	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2101	intron_retention	FALSE	non_canonical	0	0	junction_15	803.132344216612	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATACTTGGTGATGTCAT	NA	False	NA	10	True	AATAAA	-12	NA	111760550	111782195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140
ES.33923.113	chr8	+	4291	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	1175.29628073095	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760550	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778000_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780843_111781140_111781255_111781650
ES.33923.114	chr8	+	3449	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	773.637202790785	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760550	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111760763_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.117	chr8	+	4112	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2097	intron_retention	FALSE	canonical	0	0	junction_16	996.009782833482	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760550	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111777162_111779044_111779154_111779822_111779937_111780401_111780439_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.118	chr8	+	3676	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2096	intron_retention	FALSE	canonical	2	99	junction_1	771.066331452749	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760550	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.12	chr8	+	3407	21	NNC	ENSMUSG00000031960.15	novel	659	3	NA	NA	-3345	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	751.072373343608	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111756430	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756549_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.121	chr8	+	3614	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	10	-2097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	782.098529598413	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760557	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776991_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.124	chr8	+	3931	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	10	-2096	intron_retention	FALSE	canonical	2	1913	junction_1	383.254209988206	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760557	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.126	chr8	+	4759	18	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	10	-2098	intron_retention	FALSE	non_canonical	0	0	junction_5	1051.20177394741	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGTGATGTCATGCG	NA	False	NA	13	True	AATAAA	-15	NA	111760557	111782198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769300_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.127	chr8	+	3617	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	11	-2099	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	792.182016647689	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760558	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768293_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.128	chr8	+	4209	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	12	-2099	intron_retention	FALSE	canonical	2	1913	junction_1	378.726997326775	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760559	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.129	chr8	+	4900	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	12	-2099	intron_retention	FALSE	non_canonical	0	0	junction_14	1049.56804200216	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760559	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780637_111780756_111780844_111781140_111781255_111781650
ES.33923.13	chr8	+	4047	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3345	-2090	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	1049.33768662834	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCATGCGCTCTGCTT	NA	False	NA	21	True	AATAAA	-23	NA	111756430	111782206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759754_111760174_111760271_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.130	chr8	+	4499	19	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	12	-2097	intron_retention	FALSE	canonical	2	1913	junction_1	393.612079509512	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760559	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.134	chr8	+	3460	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	14	-2097	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	764.496466731815	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760561	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.135	chr8	+	3610	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	14	-2097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	792.686438637624	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760561	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777147_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.136	chr8	+	5809	19	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	15	-2096	intron_retention	FALSE	canonical	2	1913	junction_1	392.436851096792	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760562	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.137	chr8	+	5501	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	19	-2099	intron_retention	FALSE	canonical	2	1913	junction_1	396.030413784925	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760566	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.139	chr8	+	3617	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	27	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	786.594461905244	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760574	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773555_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.14	chr8	+	5640	24	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3330	-2095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1123.26807665075	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111756445	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111758198_111760174_111760271_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.140	chr8	+	3670	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	27	-2100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	790.010955620237	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTTGGTGATGTCATG	NA	False	NA	11	True	AATAAA	-13	NA	111760574	111782196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770035_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.142	chr8	+	4114	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	29	-2095	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_17	771.505541133698	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760576	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111780439_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.144	chr8	+	3594	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	35	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	791.595242216627	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760582	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779830_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.145	chr8	+	3851	20	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	196	2099	182	-2099	intron_retention	FALSE	canonical	2	1913	junction_1	386.054156349014	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760729	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140
ES.33923.147	chr8	+	1791	10	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	194	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1116.58531489184	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760741	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111776341_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.15	chr8	+	6776	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2857	-2097	intron_retention	FALSE	non_canonical	0	0	junction_1	773.637202790785	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111756918	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111757602_111758093_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.153	chr8	+	5508	12	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	231	-1045	intron_retention	FALSE	canonical	3	2733	junction_7	197.014913225009	2975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAGGAACTCAGGCACT	NA	False	NA	NA	False	NA	NA	NA	111760778	111775597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543
ES.33923.154	chr8	+	3674	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	244	-2095	intron_retention	FALSE	canonical	2	1913	junction_1	396.686679042339	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760791	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.156	chr8	+	4735	20	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	1566	2094	1552	-2094	3prime_fragment	FALSE	canonical	2	2613	junction_18	264.272838112412	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGATGTCATGCGCTCT	NA	False	NA	17	True	AATAAA	-19	NA	111762099	111782202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.157	chr8	+	3291	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	2991	-2098	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	762.862490921792	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGTGATGTCATGCG	NA	False	NA	13	True	AATAAA	-15	NA	111763538	111782198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780843_111781140_111781255_111781650
ES.33923.16	chr8	+	3504	11	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-21	-1063	intron_retention	FALSE	canonical	3	881	junction_1	716.494556853016	2975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111760489	111775579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543
ES.33923.162	chr8	+	2937	18	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	6693	2099	-1131	-2099	3prime_fragment	FALSE	canonical	2	2613	junction_16	268.111426508125	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111767226	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.163	chr8	+	4518	14	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	570	-2097	intron_retention	FALSE	canonical	2	2613	junction_12	266.536874232148	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111768927	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.164	chr8	+	4056	3	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	240	-2095	intron_retention	FALSE	non_canonical	0	0	junction_1	1306.5	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111769950	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111770127_111778024_111780844_111781140
ES.33923.165	chr8	+	2633	11	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1796	-2099	intron_retention	FALSE	canonical	2	2613	junction_9	271.080818207412	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111771506	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.166	chr8	+	3081	9	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-865	-2099	intron_retention	FALSE	non_canonical	0	0	junction_1	1457.8191706707	3058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111773678	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111773746_111774543_111774658_111776330_111777999_111778903_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.167	chr8	+	1627	10	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-837	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1086.75050801307	3058	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111773706	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779052_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.168	chr8	+	5293	8	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	993	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1215.43589224741	3216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATCTGTTGTGTTTTTT	NA	False	NA	10	True	AGTAAA	-27	NA	111775536	111784236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111776538_111776976_111778000_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.169	chr8	+	5129	5	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1139	-2092	intron_retention	FALSE	canonical	2	2613	junction_3	415.839512312142	3056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111775682	111782204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.170	chr8	+	3579	8	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	15795	5	1785	-5	3prime_fragment	FALSE	canonical	2	2613	junction_6	346.3373370291	3214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGTGTTGAGTCTG	NA	False	NA	65	True	NA	NA	NA	111776328	111784291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.171	chr8	+	3726	4	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	2614	-2095	intron_retention	FALSE	canonical	0	0	junction_1	1455.1614648859	3056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111777157	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111777996_111778900_111780641_111780756_111780844_111781140
ES.33923.172	chr8	+	1329	6	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	4259	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1357.04434710145	3056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111778802	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111779154_111779822_111779937_111780520_111780637_111780756_111780844_111781140_111781255_111781650
ES.33923.173	chr8	+	2973	4	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	19916	65	5906	-65	3prime_fragment	FALSE	canonical	2	2613	junction_2	415.503175546095	3214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATACATCTGTTGTGT	NA	False	NA	5	True	AGTAAA	-22	NA	111780449	111784231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.174	chr8	+	3353	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	498	-2525	498	2525	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	111783468	111786821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111783500_111786800
ES.33923.19	chr8	+	5430	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	886.945156139882	3220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	False	NA	70	True	NA	NA	NA	111760497	111784296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780843_111781140_111781255_111781650
ES.33923.2	chr8	+	3790	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3367	-2096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1050.07378430248	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111756408	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111760027_111760174_111760271_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.22	chr8	+	3304	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	890.486445713802	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760507	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779062_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.24	chr8	+	5647	19	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2095	intron_retention	FALSE	canonical	2	881	junction_1	594.951800620629	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760508	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.26	chr8	+	5179	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-62	intron_retention	FALSE	non_canonical	0	0	junction_5	1378.40231547638	3220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATCTGTTGTGTTTT	NA	False	NA	8	True	AGTAAA	-25	NA	111760510	111784234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111767911_111768302_111768872_111769090_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776959_111777162_111779044_111779154_111779822_111779937_111780520_111780844_111781140_111781255_111781650_111782238_111782874
ES.33923.27	chr8	+	4598	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2099	intron_retention	FALSE	canonical	0	0	junction_14	911.968046288643	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760510	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777996_111778900_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.28	chr8	+	3134	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2099	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	901.939013115355	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760510	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.3	chr8	+	1163	1	Intergenic	novelGene_27613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	111756408	111757571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111756400_111757600
ES.33923.30	chr8	+	2053	11	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	-23	11838	0	702	5prime_fragment	FALSE	canonical	3	1913	junction_1	414.645921238832	2939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTTTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	111760510	111772458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158
ES.33923.31	chr8	+	3437	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_1	741.049787463703	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760510	111782204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760652_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.36	chr8	+	3355	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	1054.57053407435	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760511	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780401_111780439_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.37	chr8	+	1628	10	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1233.97467809224	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760511	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768293_111779888_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.38	chr8	+	3772	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1	-2098	intron_retention	FALSE	canonical	2	31	junction_1	777.034580955056	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGGTGATGTCATGCG	NA	False	NA	13	True	AATAAA	-15	NA	111760511	111782198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140
ES.33923.39	chr8	+	3889	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2097	intron_retention	FALSE	canonical	2	881	junction_1	589.374319632828	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760513	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.4	chr8	+	4058	24	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3367	-2096	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1122.94782537993	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111756408	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759816_111760174_111760271_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.41	chr8	+	5199	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2099	intron_retention	FALSE	canonical	2	881	junction_1	589.258438145104	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760513	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.44	chr8	+	3298	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	889.95062222575	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760513	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771617_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.45	chr8	+	3445	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2099	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_7	997.241558311517	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760513	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769090_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.46	chr8	+	4694	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2095	intron_retention	FALSE	non_canonical	0	0	junction_15	902.796443437029	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760513	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140
ES.33923.47	chr8	+	5252	20	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2097	intron_retention	FALSE	canonical	0	0	junction_14	1090.79471651334	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760513	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111778016_111778905_111779154_111779822_111780439_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.48	chr8	+	3299	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	4	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1098.9575731119	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760514	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771642_111772180_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780843_111781140_111781255_111781650
ES.33923.49	chr8	+	3299	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	4	-2097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1091.56694709944	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760514	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773730_111774543_111774652_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.5	chr8	+	3373	21	NNC	ENSMUSG00000031960.15	novel	659	3	NA	NA	-3366	-2097	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	745.342947910558	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111756409	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.51	chr8	+	4294	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	7	-2095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	890.486445713802	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760517	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.53	chr8	+	3401	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	9	-2100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	773.637202790785	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTTGGTGATGTCATG	NA	False	NA	11	True	AATAAA	-13	NA	111760519	111782196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111760803_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.54	chr8	+	5762	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	-13	1	10	-1	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	3220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTTGAGTCTGTGTT	NA	False	NA	69	True	NA	NA	NA	111760520	111784295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.56	chr8	+	5403	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-10	-59	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	767.881536711079	3220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATCTGTTGTGTTTTTTC	NA	False	NA	11	True	AGTAAA	-28	NA	111760523	111784237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760541_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.57	chr8	+	3475	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-8	-2096	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	772.336353007465	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760525	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760652_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.6	chr8	+	4523	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3365	-2087	intron_retention	FALSE	canonical	2	6	junction_1	772.522146685894	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGCTCTGCTTCTT	NA	False	NA	24	True	AATAAA	-26	NA	111756410	111782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759754_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.61	chr8	+	2692	17	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	843.381009593973	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760531	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111782176
ES.33923.63	chr8	+	3769	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2099	intron_retention	FALSE	canonical	2	1913	junction_1	392.999975330048	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760531	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780844_111781140_111781255_111781650
ES.33923.64	chr8	+	4625	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	1006.82510894395	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760531	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111778001_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781246_111781650
ES.33923.65	chr8	+	3727	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2097	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_6	787.286051889655	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760531	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769090_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.66	chr8	+	4091	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-1	-2099	intron_retention	FALSE	canonical	2	1913	junction_1	384.723176371886	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760532	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.67	chr8	+	5605	19	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2095	intron_retention	FALSE	canonical	2	1913	junction_1	406.076457709842	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111760533	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.69	chr8	+	3752	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1173.77728150444	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATACTTGGTGATGTCA	NA	False	NA	9	True	AATAAA	-11	NA	111760533	111782194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111773913_111774019_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780843_111781140_111781255_111781650
ES.33923.7	chr8	+	4094	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3365	-2099	intron_retention	FALSE	canonical	2	3	junction_1	868.771627408244	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111756410	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759816_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.70	chr8	+	3714	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	1	-2099	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	978.545438190365	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760534	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111761980_111762045_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.8	chr8	+	3984	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3365	-2095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1050.07378430248	3063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGATGTCATGCGCTC	NA	False	NA	16	True	AATAAA	-18	NA	111756410	111782201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759754_111760174_111760349_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.80	chr8	+	3391	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2094	at_least_one_novel_splicesite	FALSE	canonical	2	99	junction_1	755.304689912074	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGATGTCATGCGCTCT	NA	False	NA	17	True	AATAAA	-19	NA	111760536	111782202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.81	chr8	+	3660	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	787.791868135233	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTTGGTGATGTCATG	NA	False	NA	11	True	AATAAA	-13	NA	111760536	111782196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780654_111780756_111780844_111781140_111781255_111781650
ES.33923.82	chr8	+	4063	19	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	3	-2097	intron_retention	FALSE	canonical	3	1913	junction_1	381.542030433941	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760536	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111781255_111781650
ES.33923.86	chr8	+	4220	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	4	-2097	intron_retention	FALSE	canonical	2	1913	junction_1	396.844457622513	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGTGATGTCATGCGC	NA	False	NA	14	True	AATAAA	-16	NA	111760537	111782199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.88	chr8	+	2467	14	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	5	-2099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	906.925438765111	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760538	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774574_111781809
ES.33923.89	chr8	+	2872	17	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	5	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	832.273683577103	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111760538	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760848_111768906_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.9	chr8	+	4345	23	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-3359	-2099	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	982.171060322761	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	False	NA	12	True	AATAAA	-14	NA	111756416	111782197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111756492_111759816_111760174_111760271_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.90	chr8	+	3640	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	5	-2096	at_least_one_novel_splicesite	FALSE	canonical	2	84	junction_20	766.948595083139	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760538	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781246_111781650
ES.33923.93	chr8	+	4324	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-5	-2096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	792.686438637624	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGATGTCATGCGCT	NA	False	NA	15	True	AATAAA	-17	NA	111760542	111782200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777702_111778905_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.94	chr8	+	3428	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-4	-2085	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	768.623438967161	3062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCGCTCTGCTTCTTGT	NA	False	NA	26	True	AATAAA	-28	NA	111760543	111782211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111760577_111760803_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33923.98	chr8	+	3331	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	-2	-2088	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	3062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATGCGCTCTGCTTCT	NA	False	NA	23	True	AATAAA	-25	NA	111760545	111782208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ES.33924.1	chr8	-	6651	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	-35	-4	-35	4	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTATTTTGTCTGCATTA	NA	False	NA	-1	True	AATAAA	-21	NA	111754431	111729815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.11	chr8	-	6920	11	NIC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	28	-2	intron_retention	FALSE	canonical	3	85	junction_10	90.4217341129886	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGTATTTTGTCT	NA	False	NA	-7	True	AATAAA	-15	NA	111754368	111729821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.13	chr8	-	5842	12	NNC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	29	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.504376941049	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTATGGGTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	111758354	111729826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111734352_111735386_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ES.33924.14	chr8	-	3201	2	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	21331	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTATGGGTATTT	NA	False	NA	-12	True	AATAAA	-10	NA	111733065	111729826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111730674_111730711
ES.33924.15	chr8	-	4477	11	NIC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	28	1450	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	108.803906179879	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	111758355	111731840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111758253
ES.33924.16	chr8	-	4559	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	32	2021	32	1450	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	111754364	111731840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.17	chr8	-	3118	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	27	3467	27	4	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGGATCAAACTTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	111754369	111733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.18	chr8	-	3757	12	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	-1994	4	intron_retention	FALSE	canonical	0	0	junction_11	104.686860889871	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGGATCAAACTTGAA	NA	False	NA	NA	False	AATAAA	-16	NA	111760377	111733286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111759598
ES.33924.19	chr8	-	3029	11	NIC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	28	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	108.803906179879	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGTGGATCAAACTTG	NA	False	NA	NA	False	AATAAA	-14	NA	111758355	111733288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111758253
ES.33924.2	chr8	-	6634	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	-55	-3475	-55	4	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTATTTTGTCTGCATTA	NA	False	NA	-1	True	AATAAA	-21	NA	111758438	111729815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ES.33924.20	chr8	-	1799	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	-13	4826	-13	-1355	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCCATCTTTTTTTTTT	NA	False	NA	0	True	AATACA	-18	NA	111754409	111734645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.21	chr8	-	1765	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	-16	1355	-16	-1355	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCCATCTTTTTTTTTT	NA	False	NA	0	True	AATACA	-18	NA	111758399	111734645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ES.33924.23	chr8	-	171	1	FSM	ENSMUSG00000093087.3	ENSMUST00000175346.3	81	1	50	-140	50	140	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAGAAAAAAAAATAG	765	False	NA	NA	False	NA	NA	NA	111743112	111742941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111742900_111743100
ES.33924.24	chr8	-	3073	1	NIC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	1	-22019	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCGGAAAAAAAATTCCCA	NA	False	NA	NA	False	NA	NA	NA	111758382	111755309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111755300_111758400
ES.33924.3	chr8	-	6502	11	NIC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	26	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	108.803906179879	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111758357	111729817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111758253
ES.33924.4	chr8	-	5400	13	NNC	ENSMUSG00000033658.17	novel	3104	12	NA	NA	-84	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.240162943315	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111758467	111729817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111731192_111732452_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ES.33924.6	chr8	-	5382	13	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	-7	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	106.332125123752	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111754403	111729817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111731170_111732408_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.7	chr8	-	6658	12	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	111.056905970031	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTATTTTGTCTGCAT	NA	False	NA	-3	True	AATAAA	-19	NA	111754427	111729817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747578_111747728_111749032_111749087_111750597_111750647_111754229
ES.33924.8	chr8	-	5388	13	NNC	ENSMUSG00000033658.17	novel	6612	12	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.287010781337	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTATTTTGTCTGCA	NA	False	NA	-4	True	AATAAA	-18	NA	111754369	111729818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111731170_111732408_111734985_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ES.33925.1	chr8	+	184	1	Intergenic	novelGene_27614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	111793176	111793360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111793200_111793400
ES.33926.1	chr8	+	180	1	Intergenic	novelGene_27615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAATAACCACAACA	NA	False	NA	NA	False	NA	NA	NA	111795870	111796050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111795900_111796000
ES.33927.1	chr8	-	3402	9	NIC	ENSMUSG00000033633.16	novel	2685	14	NA	NA	188	0	intron_retention	FALSE	canonical	0	0	junction_2	0.695970545353753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCTTTGCAATTCATC	NA	False	NA	NA	False	ATTAAA	-15	NA	111808306	111796129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111796560_111797316_111799361_111800280_111800374_111801779_111801888_111802047_111802170_111802657_111802756_111805379_111805623_111807471_111807564_111808134
ES.33927.2	chr8	-	173	1	Intergenic	novelGene_27616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTTCAGGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	111801517	111801344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111801300_111801500
ES.33928.1	chr8	-	160	1	Intergenic	novelGene_27617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTAAG	NA	False	NA	NA	False	NA	NA	NA	111810751	111810591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111810600_111810800
ES.33929.1	chr8	+	156	1	Intergenic	novelGene_27618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGAG	NA	False	NA	NA	False	NA	NA	NA	111817612	111817768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111817600_111817800
ES.3393.1	chr10	+	209	1	Intergenic	novelGene_2619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	81352528	81352737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81352500_81352700
ES.33930.1	chr8	+	7693	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	-45	-2710	-34	2710	multi-exon	TRUE	canonical	3	24	junction_1	8.20878085010087	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGAAATGTCCTTTAA	NA	False	NA	21	True	AATAAA	-30	NA	111821227	111866416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.10	chr8	+	6116	10	ISM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	23481	-2566	23467	2566	3prime_fragment	FALSE	canonical	3	26	junction_9	8.40634680861233	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCCGACTTTGGACACA	NA	False	NA	NA	False	AATAAA	-20	NA	111844753	111866272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.11	chr8	+	5539	4	ISM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	33600	-2702	33586	2702	3prime_fragment	FALSE	canonical	3	26	junction_3	6.94422221866655	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCACTTGTGAAATG	NA	False	NA	13	True	AATAAA	-22	NA	111854872	111866408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.12	chr8	+	7232	1	Genic_Genomic	ENSMUSG00000033624.11	novel	NA	NA	NA	NA	40006	4818	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111861292	111868524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_111861300_111868500
ES.33930.2	chr8	+	2983	18	NNC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.2522506936001	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTGTCTTCCCATTT	NA	False	NA	NA	False	NA	NA	NA	111821253	111861783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111821459_111828492_111828723_111830539_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.3	chr8	+	7604	18	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	4	2706	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.5822789149634	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTTGTGAAATGTCCT	NA	False	NA	17	True	AATAAA	-26	NA	111821265	111866412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.5	chr8	+	7595	19	NNC	ENSMUSG00000033624.11	novel	3076	19	NA	NA	74	2703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1217151757912	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCACTTGTGAAATGT	NA	False	NA	14	True	AATAAA	-23	NA	111821360	111866409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111821459_111828017_111828107_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ES.33930.6	chr8	+	8750	17	NNC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	85	2710	intron_retention	FALSE	canonical	1	1	junction_12	12.056507578897	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGAAATGTCCTTTAA	NA	False	NA	21	True	AATAAA	-30	NA	111821371	111866416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852303_111852386_111852847_111852961_111854874_111856328_111859508_111859692_111861239
ES.33930.7	chr8	+	3883	13	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	89	-8071	intron_retention	FALSE	canonical	3	24	junction_1	8.67307455417179	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111821375	111853708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847
ES.33930.8	chr8	+	3139	13	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	123	-8061	intron_retention	FALSE	canonical	3	13	junction_1	10.5313684876289	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGGAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	111821409	111853718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236
ES.33930.9	chr8	+	7365	17	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	123	2701	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	13.2049647386882	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATTCACTTGTGAAAT	NA	False	NA	12	True	AATAAA	-21	NA	111821409	111866407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111859508_111859692_111861239
ES.33931.1	chr8	-	128	1	Intergenic	novelGene_27619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	111826997	111826869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111826900_111827000
ES.33932.1	chr8	-	170	2	Intergenic	novelGene_27620	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	3710	False	NA	NA	False	NA	NA	NA	111860328	111830328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111830343_111860172
ES.33932.2	chr8	-	2525	1	Genic_Genomic	ENSMUSG00000084808.8	novel	NA	NA	NA	NA	14215	166	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGGTCATTTTGCTT	6162	False	NA	NA	False	AATAAA	-26	NA	111857876	111855351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_111855400_111857900
ES.33932.3	chr8	-	176	1	Intergenic	novelGene_27621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACC	3708	False	NA	NA	False	NA	NA	NA	111860330	111860154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111860200_111860300
ES.33933.1	chr8	+	129	1	Intergenic	novelGene_27622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	111871141	111871270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111871100_111871300
ES.33934.1	chr8	+	4033	26	Intergenic	novelGene_27623	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	182	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCTCGACGCACCCGC	NA	False	NA	NA	False	NA	NA	NA	111884036	111985839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111884692_111886428_111886540_111887252_111887373_111888056_111888166_111888999_111889101_111889269_111889413_111890402_111890527_111892188_111892326_111895289_111895386_111896119_111896237_111897860_111897954_111899049_111899160_111899832_111899899_111900867_111900952_111904275_111904415_111905464_111905617_111907564_111907668_111909161_111909285_111914345_111914563_111915300_111915480_111917817_111917894_111919155_111919360_111924223_111924443_111926769_111926855_111928157_111928191_111985402
ES.33934.10	chr8	+	175	1	Intergenic	novelGene_27631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTTG	NA	False	NA	NA	False	NA	NA	NA	111967599	111967774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111967600_111967800
ES.33934.11	chr8	+	180	1	Intergenic	novelGene_27632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGACATTAGCATTC	NA	False	NA	NA	False	NA	NA	NA	111968882	111969062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111968900_111969100
ES.33934.12	chr8	+	174	1	Intergenic	novelGene_27633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAATAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	111973682	111973856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111973700_111973900
ES.33934.13	chr8	+	188	1	Intergenic	novelGene_27634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGGGTTTCTCTGAATA	NA	False	NA	NA	False	NA	NA	NA	111975256	111975444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111975300_111975400
ES.33934.14	chr8	+	228	1	Intergenic	novelGene_27635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTTGGACCACACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	111982238	111982466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111982200_111982500
ES.33934.15	chr8	+	1728	1	Intergenic	novelGene_27636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAGTTTCAGCACCAGGT	NA	False	NA	NA	False	NA	NA	NA	111983065	111984793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111983100_111984800
ES.33934.16	chr8	+	204	1	Intergenic	novelGene_27637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGGAGAAGCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	111990379	111990583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111990400_111990600
ES.33934.2	chr8	+	157	1	Intergenic	novelGene_27624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	111893288	111893445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111893300_111893400
ES.33934.3	chr8	+	146	1	Intergenic	novelGene_27625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	111896348	111896494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111896300_111896500
ES.33934.4	chr8	+	2083	2	Antisense	novelGene_ENSMUSG00000003316.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACAGGAGAAATTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	111910799	111917448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111912816_111917381
ES.33934.5	chr8	+	193	1	Intergenic	novelGene_27627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATATGAGTACACTG	1702	False	NA	30	True	NA	NA	NA	111942453	111942646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111942500_111942600
ES.33934.6	chr8	+	177	2	Antisense	novelGene_ENSMUSG00000003316.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	21	junction_1	0	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1703	False	NA	NA	False	NA	NA	NA	111942454	111990556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111942505_111990429
ES.33934.7	chr8	+	380	1	Intergenic	novelGene_27628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATGACAATGAG	8732	False	NA	NA	False	NA	NA	NA	111949483	111949863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111949500_111949900
ES.33934.8	chr8	+	4745	1	Intergenic	novelGene_27629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGCAAACAACAACAACCA	NA	False	NA	NA	False	NA	NA	NA	111957689	111962434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111957700_111962400
ES.33934.9	chr8	+	175	1	Intergenic	novelGene_27630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAATGGGAA	NA	False	NA	NA	False	NA	NA	NA	111960209	111960384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111960200_111960400
ES.33935.1	chr8	-	8145	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	-5	-1119	-5	1119	multi-exon	TRUE	canonical	3	407	junction_22	36.1425178978997	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTCTCTGTAATAAGTG	6423	False	NA	-3	True	AATAAA	-25	NA	111985853	111879933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.11	chr8	-	4085	2	NNC	ENSMUSG00000003316.15	novel	2145	15	NA	NA	19826	1110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCGAATATTCTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	111884582	111879942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111881462_111882016
ES.33935.12	chr8	-	8007	24	NIC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	3	1109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	104.775482348321	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCGAATATTCTCT	6431	False	NA	-13	True	AATAAA	-15	NA	111985845	111879943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111985402
ES.33935.14	chr8	-	7346	23	NNC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	-19838	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	166.019066912546	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTCGAATATTCTC	9542	False	NA	-14	True	AATAAA	-14	NA	111924246	111879944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897945_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111918906_111919094_111924224
ES.33935.15	chr8	-	8114	26	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	7	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	100.500555222347	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTCGAATATTCTC	6435	False	NA	-14	True	AATAAA	-14	NA	111985841	111879944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914553_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.19	chr8	-	4518	2	NNC	ENSMUSG00000003316.15	novel	2145	15	NA	NA	-10113	1108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTCGAATATTCTC	NA	False	NA	-14	True	AATAAA	-14	NA	111914521	111879944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884349_111914407
ES.33935.22	chr8	-	6486	21	NNC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	-10060	1106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.014290985892	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTTGTCGAATATTC	NA	False	NA	-16	True	AATAAA	-12	NA	111914468	111879946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111883845_111884033_111884079_111884196_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345
ES.33935.24	chr8	-	5031	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	7	1983	7	1121	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTCCACAGAGTATT	6435	False	NA	NA	False	AATATA	-16	NA	111985841	111883035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.25	chr8	-	4766	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	-18	2273	-18	831	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTTCTGTTCATTTGC	6410	False	NA	-14	True	ATTAAA	-30	NA	111985866	111883325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.27	chr8	-	4738	26	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	0	827	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_11	92.5665166245333	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCTTTCTGTTCAT	6428	False	NA	-18	True	ATTAAA	-26	NA	111985848	111883329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897945_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.3	chr8	-	8141	26	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	-14	1112	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_11	92.5665166245333	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATATTCTCTGTA	6414	False	NA	-10	True	AATAAA	-18	NA	111985862	111879940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897945_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.30	chr8	-	4802	26	NIC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	7	823	combination_of_known_junctions	FALSE	canonical	3	3	junction_3	99.530771121297	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCTCCTTTCTGT	6435	False	NA	-22	True	ATTAAA	-22	NA	111985841	111883333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111886538_111887252_111887443_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.31	chr8	-	5376	17	NIC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	-5022	822	combination_of_known_junctions	FALSE	canonical	3	424	junction_11	37.8747421608385	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCCCTCCTTTCTG	750	False	NA	-23	True	ATTAAA	-21	NA	111909430	111883334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111907669_111909162
ES.33935.32	chr8	-	3849	16	NIC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	-3234	822	intron_retention	FALSE	canonical	3	424	junction_10	33.5552612201955	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCCCTCCTTTCTG	2538	False	NA	-23	True	ATTAAA	-21	NA	111907642	111883334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566
ES.33935.34	chr8	-	4746	26	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	7	822	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.510297979859	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTCCCTCCTTTCTG	6435	False	NA	-23	True	ATTAAA	-21	NA	111985841	111883334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889255_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.36	chr8	-	4645	25	NIC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	6	821	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	102.569488640628	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTCCCTCCTTTCT	6434	False	NA	-24	True	ATTAAA	-20	NA	111985842	111883335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111928157_111928191_111985402
ES.33935.39	chr8	-	4671	27	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	6	817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.5687292131649	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTTCTTTTTTCCCTCCT	6434	False	NA	-28	True	ATTAAA	-16	NA	111985842	111883339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111884082_111884138_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.40	chr8	-	4033	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	6	2982	6	122	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCTGATCATTGACATG	6434	False	NA	NA	False	NA	NA	NA	111985842	111884034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.41	chr8	-	3926	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	7	3088	7	16	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATATAGTAGAACTTCT	6435	False	NA	NA	False	NA	NA	NA	111985841	111884140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.42	chr8	-	2343	15	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	6	17882	6	-14405	5prime_fragment	FALSE	canonical	3	407	junction_11	33.0278175890245	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGCTTAGCATGTGGT	6434	False	NA	NA	False	AATAAA	-12	NA	111985842	111898934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33935.43	chr8	-	187	1	Intergenic	novelGene_27626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACAGTCTATAACAAT	NA	False	NA	NA	False	NA	NA	NA	111912930	111912743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_111912700_111912900
ES.33935.7	chr8	-	4319	2	NNC	ENSMUSG00000003316.15	novel	2145	15	NA	NA	20103	1112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATATTCTCTGTA	NA	False	NA	-10	True	AATAAA	-18	NA	111884305	111879940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111881173_111881218
ES.33935.8	chr8	-	8198	26	NIC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	3	1111	combination_of_known_junctions	FALSE	canonical	3	3	junction_3	99.530771121297	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCGAATATTCTCTGT	6431	False	NA	-11	True	AATAAA	-17	NA	111985845	111879941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111884694_111886430_111886538_111887252_111887443_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ES.33936.1	chr8	+	239	1	Intergenic	novelGene_27638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCATTATAAAGCTCAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	111991259	111991498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111991300_111991500
ES.33937.1	chr8	+	186	1	Intergenic	novelGene_27639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACGTGGAA	NA	False	NA	NA	False	NA	NA	NA	111993038	111993224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_111993000_111993200
ES.33937.10	chr8	+	176	1	Intergenic	novelGene_27646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAAAACTGGGGG	NA	False	NA	NA	False	NA	NA	NA	112050938	112051114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112050900_112051100
ES.33937.2	chr8	+	158	2	Antisense	novelGene_ENSMUSG00000033596.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111993040	112022749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_111993186_112022736
ES.33937.3	chr8	+	7292	3	Antisense	novelGene_ENSMUSG00000033596.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTGGCATTTTGCCTG	826	False	NA	NA	False	NA	NA	NA	112012286	112022786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112013553_112014301_112015044_112017502
ES.33937.4	chr8	+	8041	2	Antisense	novelGene_ENSMUSG00000033596.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTGGCATTTTGCCTG	826	False	NA	NA	False	NA	NA	NA	112012286	112022786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112015044_112017502
ES.33937.5	chr8	+	4159	5	Antisense	novelGene_ENSMUSG00000033596.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTCGTGTGGCATTTT	826	False	NA	NA	False	NA	NA	NA	112012286	112022781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112013541_112014288_112014782_112014860_112015044_112017502_112017571_112020620
ES.33937.6	chr8	+	2502	3	Antisense	novelGene_ENSMUSG00000033596.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	3278	False	NA	NA	False	NA	NA	NA	112014738	112022749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112015044_112017502_112017571_112020620
ES.33937.7	chr8	+	160	2	Intergenic	novelGene_27641	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	3732	False	NA	NA	False	NA	NA	NA	112022587	112051096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112022715_112051063
ES.33937.8	chr8	+	182	1	Intergenic	novelGene_27643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGACTTCCCCTGCTT	8507	False	NA	NA	False	NA	NA	NA	112027362	112027544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112027400_112027500
ES.33937.9	chr8	+	179	1	Intergenic	novelGene_27644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGCATAAATGTATG	NA	False	NA	NA	False	NA	NA	NA	112032302	112032481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112032300_112032500
ES.33938.1	chr8	-	4508	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-62	-3	-62	3	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTTCCGCCTGTTT	5434	False	NA	-6	True	AATAAA	-20	NA	112026916	111997572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.10	chr8	-	5056	12	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	323	junction_8	37.0946967762997	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5530	False	NA	-9	True	AATAAA	-17	NA	112026820	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.11	chr8	-	4360	12	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	129.861082801763	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5487	False	NA	-9	True	AATAAA	-17	NA	112026863	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.13	chr8	-	4333	13	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.327477338453	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5523	False	NA	-9	True	AATAAA	-17	NA	112026827	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020725_112023766_112024275_112026766
ES.33938.14	chr8	-	4566	14	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	157.462346396033	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5522	False	NA	-9	True	AATAAA	-17	NA	112026828	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112011848_112011998_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.2	chr8	-	4445	13	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	124.332886505006	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTCTTCCGCCTGT	5487	False	NA	-8	True	AATAAA	-18	NA	112026863	111997574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010014_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.21	chr8	-	6388	13	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	123.814265019109	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCCAGTGTCTTCCG	5523	False	NA	-13	True	AATAAA	-13	NA	112026827	111997579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112011998_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.22	chr8	-	4690	14	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	157.114174743482	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCCCAGTGTCTTCCG	5487	False	NA	-13	True	AATAAA	-13	NA	112026863	111997579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112012643_112012886_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.24	chr8	-	3597	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	25	821	-6	-821	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTGTTTTGTTTTTAA	5521	False	NA	NA	False	AATGAA	-17	NA	112026829	111998396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.25	chr8	-	3515	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	-9	937	-9	-937	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTATTTTGGGGACCT	5487	False	NA	NA	False	AATAAA	-22	NA	112026863	111998512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.26	chr8	-	4437	10	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-7	3838	intron_retention	FALSE	canonical	3	323	junction_6	37.7136710975519	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5520	False	NA	NA	False	NA	NA	NA	112026830	112002161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.27	chr8	-	219	1	Intergenic	novelGene_27640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTGCTGCTTTTGTT	494	False	NA	NA	False	NA	NA	NA	112014561	112014342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112014300_112014600
ES.33938.28	chr8	-	4694	1	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	5045	-11085	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGATATTTGAGAGTAA	9116	False	NA	NA	False	NA	NA	NA	112021778	112017084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112017100_112021800
ES.33938.29	chr8	-	176	1	Intergenic	novelGene_27642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTATTTCTTAAA	7033	False	NA	NA	False	NA	NA	NA	112025317	112025141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112025100_112025300
ES.33938.4	chr8	-	4497	12	NIC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-5	1	intron_retention	FALSE	canonical	3	323	junction_8	43.7813877961329	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTCTTCCGCCTGT	5522	False	NA	-8	True	AATAAA	-18	NA	112026828	111997574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.5	chr8	-	2070	3	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	2701	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.5	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	8228	False	NA	-9	True	AATAAA	-17	NA	112024122	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999105_112020622_112020808_112023766
ES.33938.6	chr8	-	4405	13	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	123.327477338453	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5519	False	NA	-9	True	AATAAA	-17	NA	112026831	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020803_112023776_112024275_112026766
ES.33938.7	chr8	-	4381	13	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.736603286826	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5522	False	NA	-9	True	AATAAA	-17	NA	112026828	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000478_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ES.33938.8	chr8	-	4384	13	NNC	ENSMUSG00000033596.6	novel	4443	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.327477338453	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5518	False	NA	-9	True	AATAAA	-17	NA	112026832	111997575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020771_112023766_112024275_112026766
ES.33939.1	chr8	-	179	1	Intergenic	novelGene_27645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGATATGTTAT	NA	False	NA	NA	False	NA	NA	NA	112035665	112035486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112035500_112035700
ES.3394.1	chr10	-	3143	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	-42	-2055	-42	2055	multi-exon	FALSE	canonical	3	76	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGGGTGGTACTTGAT	6378	False	NA	NA	False	AATAAA	-38	NA	81344049	81336084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81338940_81343761
ES.3394.2	chr10	-	3039	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	2	2033	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATATTAAGCACCTG	6422	False	NA	NA	False	AATAAA	-16	NA	81344005	81336106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81336729_81336766_81338940_81343761
ES.3394.3	chr10	-	2700	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	-6	1686	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTAGGTAT	6414	False	NA	NA	False	NA	NA	NA	81344013	81336453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81336724_81336761_81338940_81343761
ES.3394.5	chr10	-	1147	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	-42	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAATCAGGGAA	6378	False	NA	NA	False	AATAAA	-9	NA	81344049	81338155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81338940_81340352_81340428_81343761
ES.3394.6	chr10	-	1864	7	FSM	ENSMUSG00000034792.9	ENSMUST00000043709.8	1962	7	89	9	89	-9	multi-exon	FALSE	canonical	0	0	junction_4	27.6083723211315	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAATCAGGGAA	5868	False	NA	NA	False	AATAAA	-9	NA	81359970	81338155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81338940_81343761_81343916_81345119_81345250_81347830_81347960_81348244_81348400_81350070_81350256_81359643
ES.3394.8	chr10	-	1217	3	NNC	ENSMUSG00000034792.9	novel	1046	2	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAATCAGGGAA	6428	False	NA	NA	False	AATAAA	-9	NA	81343999	81338155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81338940_81340352_81340548_81343761
ES.3394.9	chr10	-	158	1	Intergenic	novelGene_2620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	7636	False	NA	NA	False	NA	NA	NA	81358202	81358044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81358000_81358200
ES.33940.1	chr8	+	170	1	Intergenic	novelGene_27647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAATTCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	112130734	112130904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112130700_112130900
ES.33941.1	chr8	-	173	1	Intergenic	novelGene_27648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGGTGTCTAAGTT	NA	False	NA	NA	False	NA	NA	NA	112150773	112150600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112150600_112150800
ES.33942.1	chr8	+	2015	1	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	112201267	112203282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112201300_112203300
ES.33942.2	chr8	+	4961	2	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGATTATAGCAAACA	NA	False	NA	NA	False	NA	NA	NA	112201267	112206648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112203066_112203485
ES.33942.3	chr8	+	2271	2	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGATTATAGCAAACA	NA	False	NA	NA	False	NA	NA	NA	112201267	112206648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112202832_112205941
ES.33942.4	chr8	+	178	1	Intergenic	novelGene_27650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112203283	112203461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112203300_112203500
ES.33942.5	chr8	+	175	2	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-10	NA	112203284	112212674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112203436_112212650
ES.33943.1	chr8	+	326	1	Intergenic	novelGene_27651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112245928	112246254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112245900_112246300
ES.33944.1	chr8	-	5727	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	128	-772	23	772	multi-exon	TRUE	canonical	3	54	junction_4	5.67718239974725	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTCTCAATAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	112248596	112174656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.10	chr8	-	4914	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-19	1	3	-1	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTTTGTGTGTGTAAA	NA	False	NA	NA	False	GATAAA	-24	NA	112248721	112175651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.11	chr8	-	4012	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-9	1080	-9	331	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAGAGTCTCATAATTAT	NA	False	NA	NA	False	NA	NA	NA	112248733	112176508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.12	chr8	-	3972	27	NNC	ENSMUSG00000031959.16	novel	4896	27	NA	NA	-8	327	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	13.3961047062859	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCGCAAGAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	112248732	112176512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112176730_112176764_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.14	chr8	-	3707	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-29	1405	-29	6	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTCTTCATCT	NA	False	NA	NA	False	AAGAAA	-16	NA	112248753	112176833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.15	chr8	-	3729	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-21	1188	1	1	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTTCTGTTTCTCTT	NA	False	NA	NA	False	AAGAAA	-11	NA	112248723	112176838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.16	chr8	-	3705	25	NIC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-7	-108	intron_retention	FALSE	canonical	3	54	junction_4	5.6856300344719	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCATTCTTTTTCTTG	NA	False	NA	0	True	TATAAA	-36	NA	112248709	112176947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.17	chr8	-	3488	26	NNC	ENSMUSG00000031959.16	novel	3618	27	NA	NA	25	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.9183034911233	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGCATTCTTTTTCTT	NA	False	NA	-1	True	TATAAA	-35	NA	112248677	112176948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112177712_112185242_112185386_112185554_112185679_112187210_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231074_112232523_112232574_112248559
ES.33944.18	chr8	-	3627	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-30	1299	-8	-110	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGCATTCTTTTTCT	NA	False	NA	-2	True	TATAAA	-34	NA	112248732	112176949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.19	chr8	-	3591	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-29	1521	-29	-110	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGCATTCTTTTTCT	NA	False	NA	-2	True	TATAAA	-34	NA	112248753	112176949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.2	chr8	-	5062	26	NNC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-10	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	13.6483845197884	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCCTTTGTTTAC	NA	False	NA	1	True	AGTAAA	-36	NA	112248712	112175408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231074_112232523_112232574_112248559
ES.33944.20	chr8	-	3449	25	NIC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-6	-111	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	13.9281389839259	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGCATTCTTTTTC	NA	False	NA	-3	True	TATAAA	-33	NA	112248708	112176950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.22	chr8	-	3493	26	NNC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-10	-128	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	13.0882542762585	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATATGATGGACATAT	NA	False	NA	-20	True	TATAAA	-16	NA	112248712	112176967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217042_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.23	chr8	-	3862	26	NNC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-9	-3562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6050578830081	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGAGTTGATTTTAT	NA	False	NA	NA	False	NA	NA	NA	112248733	112180401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112181455_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.24	chr8	-	2509	1	Intergenic	novelGene_27649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATACAAAAATACAA	NA	False	NA	NA	False	AATACA	-7	NA	112184017	112181508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112181500_112184000
ES.33944.25	chr8	-	2747	21	NNC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-9	-13128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7780242251798	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTCTTCTTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	112248733	112189967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112190513_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.3	chr8	-	5124	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-27	-14	-27	14	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTGATGTCCTTT	NA	False	NA	-5	True	AGTAAA	-30	NA	112248751	112175414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.4	chr8	-	4985	26	NNC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-6	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	13.6078800700183	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTGATGTCCTTT	NA	False	NA	-5	True	AGTAAA	-30	NA	112248708	112175414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248655
ES.33944.6	chr8	-	5151	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-20	-235	2	13	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAGTCTGATGTCCTT	NA	False	NA	-6	True	AGTAAA	-29	NA	112248722	112175415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.8	chr8	-	5227	25	NIC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	-7	3	intron_retention	FALSE	canonical	3	54	junction_4	5.6856300344719	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTGTACTAACACAGTC	NA	False	NA	-16	True	AGTAAA	-19	NA	112248709	112175425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33944.9	chr8	-	4870	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	-9	222	-9	0	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTGTGTGTGTAAAT	NA	False	NA	NA	False	GATAAA	-25	NA	112248733	112175650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ES.33945.1	chr8	+	168	1	Intergenic	novelGene_27652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACACACACACACAT	NA	False	NA	NA	False	NA	NA	NA	112252333	112252501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112252300_112252500
ES.33946.1	chr8	+	230	1	Intergenic	novelGene_27653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCTCACAAGTAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	112257203	112257433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112257200_112257400
ES.33947.1	chr8	+	152	1	Intergenic	novelGene_27654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112259469	112259621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112259500_112259600
ES.33948.1	chr8	+	1871	5	NNC	ENSMUSG00000033545.15	novel	4600	6	NA	NA	11	111	intron_retention	FALSE	canonical	0	0	junction_1	55.0726792520575	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTTCCCTTGTGA	NA	False	NA	24	True	TATAAA	-15	NA	112262739	112349716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112262785_112262868_112263004_112335924_112336021_112345837_112345944_112348227
ES.33948.10	chr8	+	5032	3	ISM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-611	-112	-131	112	intron_retention	FALSE	canonical	3	114	junction_2	5.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTTTTCCCTTGTGAT	NA	False	NA	25	True	TATAAA	-16	NA	112263140	112349717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112264197_112335924_112336021_112345837
ES.33948.11	chr8	+	3409	4	NNC	ENSMUSG00000033545.15	novel	3108	4	NA	NA	-130	95	intron_retention	FALSE	non_canonical	0	0	junction_3	56.5115524079418	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTTGTGTCGACTG	NA	False	NA	8	True	AAAAAG	-28	NA	112263141	112349700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112264197_112335924_112336021_112345837_112346001_112347605
ES.33948.12	chr8	+	1633	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-129	2947	-129	110	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGTTTTCCCTTGTG	NA	False	NA	23	True	TATAAA	-14	NA	112263142	112349715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
ES.33948.13	chr8	+	1924	5	NNC	ENSMUSG00000033545.15	novel	1238	5	NA	NA	-121	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.2969319532159	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTCTTGTGTCGAC	NA	False	NA	6	True	AAAAAG	-26	NA	112263150	112349698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112264197_112335924_112336021_112345837_112345944_112348235_112348320_112349106
ES.33948.14	chr8	+	5356	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-306	-1942	-104	0	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATTGAGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	112263167	112352352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ES.33948.15	chr8	+	4239	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-101	313	-101	-3	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTGTGTATTGAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	112263170	112352349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
ES.33948.16	chr8	+	3307	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-303	104	-101	-104	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTACAAAA	NA	False	NA	NA	False	ATTAAA	-5	NA	112263170	112350306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ES.33948.17	chr8	+	4212	5	NNC	ENSMUSG00000033545.15	novel	4451	5	NA	NA	-89	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.251243765702	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAATGGCTGTGTATTG	NA	False	NA	NA	False	AATAAA	-10	NA	112263182	112352345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112264197_112335924_112336010_112345837_112345944_112348227_112348320_112349430
ES.33948.18	chr8	+	2888	5	NNC	ENSMUSG00000033545.15	novel	1238	5	NA	NA	-79	111	intron_retention	FALSE	canonical	0	0	junction_1	55.0726792520575	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTTCCCTTGTGA	NA	False	NA	24	True	TATAAA	-15	NA	112263192	112349716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112264197_112264905_112265099_112335924_112336021_112345837_112345944_112348227
ES.33948.19	chr8	+	177	1	Intergenic	novelGene_27658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	112282385	112282562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112282400_112282600
ES.33948.2	chr8	+	1242	7	NNC	ENSMUSG00000033545.15	novel	559	5	NA	NA	160	94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.5881215479211	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTCTTGTGTCGACT	NA	False	NA	7	True	AAAAAG	-27	NA	112262888	112349699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112263004_112317700_112317839_112333378_112333481_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ES.33948.3	chr8	+	1692	5	NNC	ENSMUSG00000033545.15	novel	4600	6	NA	NA	178	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1082032450861	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGATGCACCGTGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	112262906	112350403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112263008_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ES.33948.4	chr8	+	2805	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-389	692	-187	113	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTTTCCCTTGTGATG	NA	False	NA	26	True	TATAAA	-17	NA	112263084	112349718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ES.33948.5	chr8	+	4629	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-644	-2747	-164	0	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATTGAGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	112263107	112352352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ES.33948.6	chr8	+	2858	5	ISM	ENSMUSG00000033545.15	ENSMUST00000174376.8	501	6	-998	-572	-151	100	intron_retention	FALSE	canonical	1	3	junction_1	52.1200537221519	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	False	NA	13	True	TATAAA	-4	NA	112263120	112349705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112264197_112333378_112333481_112335924_112336021_112345837_112345944_112348227
ES.33948.7	chr8	+	1956	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-624	-94	-144	94	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTCTTGTGTCGACT	NA	False	NA	7	True	AAAAAG	-27	NA	112263127	112349699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ES.33948.8	chr8	+	2664	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-621	-805	-141	0	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACCGTGTGATTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	112263130	112350410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ES.33948.9	chr8	+	3441	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-333	0	-131	0	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACCGTGTGATTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	112263140	112350410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ES.33949.1	chr8	+	1910	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-94	-5	11	5	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGGCTTTTTGTGCT	NA	False	NA	18	True	AATAGA	-25	NA	112370043	112397648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
ES.33949.10	chr8	+	1835	5	NNC	ENSMUSG00000055835.11	novel	1930	4	NA	NA	8066	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.6817240078565	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	12	True	AATAGA	-19	NA	112378234	112397642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112378352_112379990_112380048_112385017_112385074_112392751_112392837_112396122
ES.33949.11	chr8	+	4715	2	ISM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	19506	-1	19475	1	3prime_fragment	FALSE	canonical	3	60	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTTTTTGGCTTTTTG	NA	False	NA	14	True	AATAGA	-21	NA	112389643	112397644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112392837_112396122
ES.33949.12	chr8	+	3356	2	ISM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	21175	-311	21144	311	3prime_fragment	FALSE	canonical	3	60	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACGTCATGTGTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	112391312	112397954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112392837_112396122
ES.33949.2	chr8	+	1887	4	FSM	ENSMUSG00000055835.11	ENSMUST00000212072.2	1930	4	42	1	-37	-1	multi-exon	FALSE	canonical	1	5	junction_2	33.7671766990109	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGAGTGTTTTTGGCT	NA	False	NA	9	True	AATAGA	-16	NA	112370074	112397639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112370245_112385017_112385074_112392692_112392837_112396122
ES.33949.3	chr8	+	1363	1	NIC	ENSMUSG00000055835.11	novel	1930	4	NA	NA	-35	-25875	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	112370076	112371439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_112370100_112371400
ES.33949.4	chr8	+	4218	2	ISM	ENSMUSG00000055835.11	ENSMUST00000212206.2	1636	5	-17	8250	-17	-8229	5prime_fragment	FALSE	canonical	3	86	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	112370094	112389085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112370245_112385017
ES.33949.5	chr8	+	1800	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	-62	-329	-5	0	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTTTTTGGCTTTTT	NA	False	NA	13	True	AATAGA	-20	NA	112370106	112397643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
ES.33949.6	chr8	+	1718	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	-29	122	-3	-119	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATTATACTGAAA	NA	False	NA	NA	False	NA	NA	NA	112370108	112397521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
ES.33949.7	chr8	+	1910	5	FSM	ENSMUSG00000055835.11	ENSMUST00000212206.2	1636	5	33	-307	7	-1	multi-exon	FALSE	canonical	0	0	junction_4	35.5061614371365	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	12	True	AATAGA	-19	NA	112370144	112397642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112394363_112394471_112396122
ES.33949.8	chr8	+	1551	3	NIC	ENSMUSG00000055835.11	novel	1930	4	NA	NA	11	-119	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATTATACTGAAA	NA	False	NA	NA	False	NA	NA	NA	112370148	112397521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_112370245_112385017_112385074_112396122
ES.33949.9	chr8	+	1886	5	NNC	ENSMUSG00000055835.11	novel	1930	4	NA	NA	8057	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6082693913001	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGTTTTTGGCTTTT	NA	False	NA	12	True	AATAGA	-19	NA	112378225	112397642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112378352_112379990_112380048_112385017_112385074_112392709_112392837_112396122
ES.3395.1	chr10	-	3450	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	-35	-1	-35	1	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTGTGATTATTAGTA	4188	False	NA	1	True	AATAAA	-20	NA	81381059	81364556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.10	chr10	-	3928	4	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	-32	-8	intron_retention	FALSE	canonical	3	379	junction_1	27.8567765543682	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	7837	False	NA	-8	True	AATAAA	-11	NA	81370999	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366820_81366925_81368359_81369085_81369241_81370913
ES.3395.11	chr10	-	4139	6	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	370	junction_5	26.7058046124808	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	4217	False	NA	-8	True	AATAAA	-11	NA	81381030	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81369241_81370913_81371099_81380625
ES.3395.12	chr10	-	3519	5	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	69	-8	intron_retention	FALSE	canonical	3	370	junction_4	27.6857363998143	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	4292	False	NA	-8	True	AATAAA	-11	NA	81380955	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.13	chr10	-	5446	2	ISM	ENSMUSG00000034781.6	ENSMUST00000146984.2	1547	3	-2268	-1555	850	-8	intron_retention	FALSE	canonical	3	379	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	8719	False	NA	-8	True	AATAAA	-11	NA	81370117	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81366820_81366925
ES.3395.14	chr10	-	2867	8	NNC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.901610378021	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	4301	False	NA	-8	True	AATAAA	-11	NA	81380946	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81365633_81366093_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.15	chr10	-	2304	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	29	1081	29	482	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTGTCAGATTTCT	4252	False	NA	NA	False	NA	NA	NA	81380995	81365638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.16	chr10	-	1847	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	31	1536	31	27	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCAGCCAGGTGACAC	4254	False	NA	NA	False	AAGAAA	-22	NA	81380993	81366093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.17	chr10	-	1589	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	-19	1844	-19	-281	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATGAACAGCAGTGTG	4204	False	NA	42	True	NA	NA	NA	81381043	81366401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.18	chr10	-	2441	6	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	73	-281	intron_retention	FALSE	canonical	3	370	junction_5	28.4225262775848	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATGAACAGCAGTGTG	4296	False	NA	42	True	NA	NA	NA	81380951	81366401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366820_81366925_81367080_81367155_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.19	chr10	-	1643	6	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	29	-285	intron_retention	FALSE	canonical	3	370	junction_5	25.6795638592247	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACATGAACAGCAG	4252	False	NA	38	True	NA	NA	NA	81380995	81366405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.2	chr10	-	5025	5	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	55	-5	intron_retention	FALSE	canonical	3	370	junction_4	28.9601018644617	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	4278	False	NA	-5	True	AATAAA	-14	NA	81380969	81364562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366820_81366925_81367080_81367155_81369241_81370913_81371099_81380625
ES.3395.20	chr10	-	3284	4	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	29	-285	intron_retention	FALSE	canonical	3	370	junction_3	33.436506994601	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACATGAACAGCAG	4252	False	NA	38	True	NA	NA	NA	81380995	81366405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366820_81366925_81369241_81370913_81371099_81380625
ES.3395.21	chr10	-	5964	1	NIC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	-1432	-315	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	6437	False	NA	8	True	NA	NA	NA	81372399	81366435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81366400_81372400
ES.3395.23	chr10	-	1497	7	NNC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	49	-350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.112503973371	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTGGCTTGAGGTTTT	4272	False	NA	-27	True	NA	NA	NA	81380975	81366470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380580
ES.3395.3	chr10	-	4286	5	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	10323	5	266	-5	3prime_fragment	FALSE	canonical	3	379	junction_1	18.0468141232739	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	8135	False	NA	-5	True	AATAAA	-14	NA	81370701	81364562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085
ES.3395.4	chr10	-	3468	7	NNC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	73	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.112503973371	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	4296	False	NA	-5	True	AATAAA	-14	NA	81380951	81364562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371231_81380625
ES.3395.5	chr10	-	3306	7	NNC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	43	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	152.050430230675	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	4266	False	NA	-5	True	AATAAA	-14	NA	81380981	81364562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81366820_81366925_81367020_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ES.3395.6	chr10	-	5260	6	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	7676	5	-2381	-5	3prime_fragment	FALSE	canonical	3	379	junction_1	22.9399215343035	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTCCTTTGTGATTA	5488	False	NA	-5	True	AATAAA	-14	NA	81373348	81364562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913
ES.3395.8	chr10	-	3432	8	NNC	ENSMUSG00000034781.6	novel	3414	7	NA	NA	66	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	187.084941965419	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	4289	False	NA	-8	True	AATAAA	-11	NA	81380958	81364565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81375494_81375587_81380625
ES.33950.1	chr8	-	164	1	Intergenic	novelGene_27655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	112270929	112270765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112270800_112270900
ES.33951.1	chr8	-	988	1	Intergenic	novelGene_27656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACAGGCTTCACTAGG	NA	False	NA	NA	False	NA	NA	NA	112276666	112275678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112275700_112276700
ES.33952.1	chr8	-	178	1	Intergenic	novelGene_27657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112281744	112281566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112281600_112281700
ES.33953.1	chr8	-	155	2	Antisense	novelGene_ENSMUSG00000055835.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCTGGTCCATGTCCA	NA	False	NA	NA	False	NA	NA	NA	112410668	112318352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_112318360_112410520
ES.33953.2	chr8	-	4425	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1174	-2630	-613	144	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGCTGATGTCATGTGT	NA	False	NA	NA	False	TATAAA	-18	NA	112355832	112350272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
ES.33953.3	chr8	-	2241	6	NIC	ENSMUSG00000031958.17	novel	2273	11	NA	NA	-625	-134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	5.6	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTTGAAGATTCAAC	NA	False	NA	NA	False	AATACA	-18	NA	112355844	112352268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355617
ES.33953.4	chr8	-	2057	7	NNC	ENSMUSG00000031958.17	novel	3402	9	NA	NA	198	-711	intron_retention	FALSE	canonical	0	0	junction_3	5.78551831923659	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCTGTTCTGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	112356769	112353613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112353823_112353909_112354022_112354119_112354211_112354764_112354859_112354941_112355071_112355152_112356380_112356574
ES.33953.5	chr8	-	1098	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1152	719	-635	-719	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCCGCCCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	112355854	112353621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
ES.33953.6	chr8	-	168	1	Intergenic	novelGene_27659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGAATCTGTAA	NA	False	NA	NA	False	NA	NA	NA	112372155	112371987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112372000_112372200
ES.33953.7	chr8	-	170	1	Intergenic	novelGene_27660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	112395592	112395422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112395400_112395600
ES.33954.1	chr8	-	176	1	Intergenic	novelGene_27661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGACTTTACCAC	NA	False	NA	NA	False	NA	NA	NA	112412376	112412200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112412200_112412400
ES.33955.1	chr8	+	250	1	Intergenic	novelGene_27662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACCAAACAAACA	NA	False	NA	NA	False	AAAACA	-19	NA	112434655	112434905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112434700_112434900
ES.33956.1	chr8	+	3282	3	Antisense	novelGene_ENSMUSG00000031955.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	112440926	112445267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112441069_112441912_112442029_112442243
ES.33957.1	chr8	-	3161	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	-38	-7	-38	4	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACAGAAATGCTTGAGAC	NA	False	NA	2	True	AATAAA	-21	NA	112458806	112437101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
ES.33957.10	chr8	-	7860	2	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	13554	0	intron_retention	FALSE	canonical	3	162	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112445183	112437108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112442032_112442246
ES.33957.11	chr8	-	4296	6	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	133	junction_5	12.1753850041795	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112458742	112437108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
ES.33957.12	chr8	-	2505	6	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	57.9088939628448	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112458790	112437108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112458670
ES.33957.16	chr8	-	3218	8	NNC	ENSMUSG00000031955.11	novel	3142	7	NA	NA	-31	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.9186263974186	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATTTAATAAAATTTTAA	NA	False	NA	-31	True	NA	NA	NA	112470472	112437134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447109_112447184_112447330_112447964_112470320
ES.33957.17	chr8	-	2410	6	ISM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-55	1993	-55	-1990	5prime_fragment	FALSE	canonical	3	36	junction_5	46.6218832738447	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCTCATCTTGAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	112470496	112439098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
ES.33957.18	chr8	-	2096	2	ISM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-35	8918	-35	0	5prime_fragment	FALSE	canonical	3	36	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	112470476	112446023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112447964_112470320
ES.33957.19	chr8	-	1921	2	FSM	ENSMUSG00000031955.11	ENSMUST00000212147.2	2007	2	2	84	2	-84	multi-exon	FALSE	canonical	3	133	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCATAATGAGATCTGA	NA	False	NA	NA	False	NA	NA	NA	112458735	112446107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112447964_112458670
ES.33957.2	chr8	-	3205	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-61	-2	-61	2	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTACAGAAATGCTTGAG	NA	False	NA	0	True	AATAAA	-19	NA	112470502	112437103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
ES.33957.3	chr8	-	5782	4	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	6	0	intron_retention	FALSE	canonical	3	133	junction_3	13.0213499897497	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112458731	112437105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112442032_112442246_112442409_112447330_112447964_112458670
ES.33957.4	chr8	-	2979	6	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	54.9887261172688	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112458745	112437105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112438027_112439232_112439323_112439970_112441069_112442246_112442409_112447330_112447964_112458670
ES.33957.5	chr8	-	3217	8	NNC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.0914525168082	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112458768	112437105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112443091_112443190_112447330_112447964_112458670
ES.33957.6	chr8	-	3030	8	NNC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.5799359821081	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112458729	112437105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447713_112447762_112447964_112458670
ES.33957.7	chr8	-	8042	6	NIC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	127	junction_1	12.280065146407	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112458772	112437108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112447964_112458670
ES.33957.8	chr8	-	3870	6	NNC	ENSMUSG00000031955.11	novel	3116	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	58.2395054924061	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112458768	112437108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447782_112447964_112458670
ES.33958.1	chr8	+	260	1	Intergenic	novelGene_27664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATAGGT	NA	False	NA	NA	False	NA	NA	NA	112479307	112479567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112479300_112479600
ES.33959.1	chr8	+	178	1	Intergenic	novelGene_27665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCCAAGCCTACC	NA	False	NA	NA	False	NA	NA	NA	112479605	112479783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112479600_112479800
ES.3396.1	chr10	+	181	1	Intergenic	novelGene_2621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGAGTCTGGTACTC	129	False	NA	NA	False	NA	NA	NA	81393179	81393360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81393200_81393400
ES.33960.1	chr8	-	735	3	Intergenic	novelGene_27663	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGGCTTGTTCTTC	NA	False	NA	NA	False	AAAACA	-9	NA	112480788	112475413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112475699_112478898_112479156_112480595
ES.33961.1	chr8	+	176	1	Intergenic	novelGene_27666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	112489798	112489974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112489800_112490000
ES.33962.1	chr8	-	349	1	Intergenic	novelGene_27667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	112491670	112491321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112491300_112491700
ES.33962.2	chr8	-	171	1	Intergenic	novelGene_27668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	112491670	112491499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112491500_112491700
ES.33963.1	chr8	+	843	1	Intergenic	novelGene_27673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112567367	112568210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112567400_112568200
ES.33964.1	chr8	-	3052	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-57	-1817	-57	1817	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAATTGTTTTCTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	112580980	112493305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.10	chr8	-	1227	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	722.394032982616	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580976	112495122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112495410_112505876_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.11	chr8	-	522	4	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-24	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	878.718384922041	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAACAAACAGAACCCT	NA	False	NA	-44	True	TTTAAA	-12	NA	112580947	112495143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112495305_112568551_112568623_112571725_112571844_112580775
ES.33964.12	chr8	-	162	1	Intergenic	novelGene_27669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACAAAAGG	NA	False	NA	NA	False	NA	NA	NA	112517392	112517230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112517200_112517400
ES.33964.13	chr8	-	257	1	Intergenic	novelGene_27670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCAGTTTTTGAGGAC	NA	False	NA	NA	False	NA	NA	NA	112519066	112518809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112518800_112519100
ES.33964.14	chr8	-	1002	6	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-23	-27029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	769.820498557943	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATTTGGTTGGTTTTCT	NA	False	NA	NA	False	CATAAA	-13	NA	112580946	112522151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112522409_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.15	chr8	-	248	1	Intergenic	novelGene_27671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTATTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	112526009	112525761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112525800_112526000
ES.33964.16	chr8	-	5472	1	Intergenic	novelGene_27672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACTGGCTGCTCATCCA	NA	False	NA	NA	False	NA	NA	NA	112542314	112536842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112536800_112542300
ES.33964.17	chr8	-	5181	5	ISM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-36	57956	-36	-57956	5prime_fragment	FALSE	canonical	3	1827	junction_3	73.6087630652764	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112580959	112553078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.18	chr8	-	921	6	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-35	-57956	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	769.023432672893	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112580958	112553078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112553243_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.2	chr8	-	1287	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	-91	-18	-91	18	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGCCGTGCTCCTTCC	NA	False	NA	-5	True	AATAAA	-33	NA	112581014	112495104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.3	chr8	-	5144	1	Genic_Genomic	ENSMUSG00000031954.7	novel	NA	NA	NA	NA	80675	18	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGCCGTGCTCCTTCC	NA	False	NA	-5	True	AATAAA	-33	NA	112500248	112495104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_112495100_112500200
ES.33964.4	chr8	-	1403	8	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-77	15	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	856.027846199753	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGGGTGCCGTGCTCCT	NA	False	NA	-8	True	AATAAA	-30	NA	112581000	112495107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112495420_112498511_112498645_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.5	chr8	-	1217	7	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-34	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	729.176247556104	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTAAGGGTGCCGTGC	NA	False	NA	-12	True	AATAAA	-26	NA	112580957	112495111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112495420_112505882_112506042_112557507_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33964.6	chr8	-	449	2	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	84866	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112496057	112495122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112495420_112495905
ES.33964.8	chr8	-	1125	6	NIC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	772.979016532791	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580990	112495122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112495420_112505882_112506042_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ES.33965.1	chr8	+	180	1	Intergenic	novelGene_27674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	112583279	112583459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112583300_112583500
ES.33965.2	chr8	+	182	2	Intergenic	novelGene_27675	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112583279	112626618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112583433_112626589
ES.33965.3	chr8	+	1236	1	Antisense	novelGene_ENSMUSG00000031953.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGAAAAACCACACACACA	NA	False	NA	NA	False	NA	NA	NA	112589462	112590698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112589500_112590700
ES.33965.4	chr8	+	132	1	Intergenic	novelGene_27677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	112599133	112599265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112599100_112599300
ES.33965.5	chr8	+	176	1	Intergenic	novelGene_27678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGTAAATG	NA	False	NA	NA	False	NA	NA	NA	112610707	112610883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112610700_112610900
ES.33965.6	chr8	+	240	1	Intergenic	novelGene_27679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAGCATTGGAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	112626448	112626688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112626400_112626700
ES.33966.1	chr8	-	3889	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	5	-16	5	16	multi-exon	FALSE	canonical	3	19	junction_1	7	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGATTTGTTTGTTTGTT	NA	False	NA	11	True	AATAAA	-30	NA	112603377	112589653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112593129_112596219_112596391_112603134
ES.33966.2	chr8	-	3823	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGATTTGTTTGTTTGTT	NA	False	NA	11	True	AATAAA	-30	NA	112603380	112589653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112593129_112596288_112596391_112603134
ES.33966.3	chr8	-	2691	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	31	-1087	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCCAATATGTGTGAAGC	NA	False	NA	NA	False	NA	NA	NA	112603351	112590756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112593129_112596288_112596391_112603134
ES.33966.4	chr8	-	2163	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	31	1684	31	-1684	multi-exon	FALSE	canonical	3	19	junction_1	7	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCTCTGTGGGCACTT	NA	False	NA	NA	False	AATAAA	-19	NA	112603351	112591353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112593129_112596219_112596391_112603134
ES.33966.5	chr8	-	2119	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	5	-1685	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTCTCTGTGGGCACT	NA	False	NA	NA	False	AATAAA	-18	NA	112603377	112591354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112593129_112596288_112596391_112603134
ES.33966.6	chr8	-	1985	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	31	1862	31	-1862	multi-exon	FALSE	canonical	3	19	junction_1	7	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATATGCGCTCCGCTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	112603351	112591531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112593129_112596219_112596391_112603134
ES.33966.7	chr8	-	4760	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	45	-1957	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGCTTCTGGTGATGA	NA	False	NA	NA	False	AATAAA	-30	NA	112603337	112591626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112595775_112595981_112596391_112603134
ES.33966.8	chr8	-	207	1	Intergenic	novelGene_27676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGGTCTTATTTTTT	NA	False	NA	-19	True	NA	NA	NA	112595976	112595769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112595800_112596000
ES.33967.1	chr8	-	2137	2	FSM	ENSMUSG00000031952.6	ENSMUST00000034430.6	2182	2	288	-243	288	243	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTAAGAGGAAGCC	NA	False	NA	NA	False	NA	NA	NA	112636791	112615524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112617634_112636763
ES.33968.1	chr8	+	137	1	Antisense	novelGene_ENSMUSG00000031951.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112654719	112654856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112654700_112654900
ES.33969.1	chr8	+	172	1	Intergenic	novelGene_27681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	112660556	112660728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112660600_112660700
ES.3397.1	chr10	+	1560	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-146	-3	-140	3	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTCCCTGCTTCTGTC	88	False	NA	17	True	AATAAA	-19	NA	81395181	81402199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.10	chr10	+	1353	6	ISM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-42	205	-36	100	intron_retention	FALSE	canonical	3	2826	junction_1	265.652856186415	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGGTTTGTTTATGA	15	False	NA	11	True	AATAAA	-11	NA	81395285	81401991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125
ES.3397.11	chr10	+	3514	5	NIC	ENSMUSG00000054452.11	novel	1410	6	NA	NA	-35	0	intron_retention	FALSE	canonical	3	2772	junction_4	259.771534237299	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACTGTGTCCCTGCTT	16	False	NA	12	True	AATAAA	-14	NA	81395286	81402194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81397151_81399928_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.12	chr10	+	1276	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-33	107	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1123.92873686705	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	18	False	NA	18	True	AATAAA	-18	NA	81395288	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399904_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.13	chr10	+	1756	6	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-29	101	intron_retention	FALSE	canonical	3	2772	junction_5	245.929583417693	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGTTTGTTTATGAT	22	False	NA	12	True	AATAAA	-12	NA	81395292	81401992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81395503_81397052_81397151_81399928_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.14	chr10	+	4126	5	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-24	107	intron_retention	FALSE	canonical	3	2826	junction_1	226.159788645108	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	27	False	NA	18	True	AATAAA	-18	NA	81395297	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81395503_81397052_81399993_81400506_81400552_81400681_81400745_81401125
ES.3397.15	chr10	+	2060	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-24	107	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1182.76926697006	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	27	False	NA	18	True	AATAAA	-18	NA	81395297	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81396235_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.18	chr10	+	1442	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1123.92873686705	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCACTGTGTCCCTGCTT	48	False	NA	12	True	AATAAA	-14	NA	81395318	81402194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399904_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.19	chr10	+	1454	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1174.6459986831	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	49	False	NA	14	True	AATAAA	-16	NA	81395319	81402196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400646_81400745_81401125_81401201_81401305
ES.3397.2	chr10	+	1325	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	-110	196	-104	109	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATGATTTCTTTCT	124	False	NA	20	True	AATAAA	-20	NA	81395217	81402000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.20	chr10	+	1294	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-2	99	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	1177.67380175214	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTGGTTTGTTTATG	49	False	NA	10	True	AATAAA	-10	NA	81395319	81401990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81396971_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.21	chr10	+	1594	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	-21	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1134.94414938455	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAACATGAAAAGG	51	False	NA	-9	True	NA	NA	NA	81395321	81402173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400306_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.22	chr10	+	1138	8	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1099.57806378963	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	51	False	NA	18	True	AATAAA	-18	NA	81395321	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395340_81395420_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.23	chr10	+	3074	5	ISM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	-1556	-3	0	2	intron_retention	FALSE	canonical	3	2901	junction_4	249.371585189652	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCCCTGCTTCTGT	51	False	NA	16	True	AATAAA	-18	NA	81395321	81402198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125
ES.3397.24	chr10	+	1203	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1181.23170179831	1060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAGTTGGTTTGTTTA	51	False	NA	8	True	AATAAA	-8	NA	81395321	81401988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401131_81401201_81401305
ES.3397.25	chr10	+	1067	8	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	3	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1099.57806378963	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	54	False	NA	18	True	AATAAA	-18	NA	81395324	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305_81401418_81401566
ES.3397.26	chr10	+	1375	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	6	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1128.69098221494	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAACATGAAAAGG	63	False	NA	-9	True	NA	NA	NA	81395333	81402173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399935_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.27	chr10	+	1478	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	1177.67380175214	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	71	False	NA	14	True	AATAAA	-16	NA	81395341	81402196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81396971_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.29	chr10	+	1142	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	64	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1128.69098221494	1060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	121	False	NA	18	True	AATAAA	-18	NA	81395391	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399935_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.3	chr10	+	2823	6	FSM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	-1610	197	-54	107	multi-exon	FALSE	canonical	3	2772	junction_5	277.977984739799	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	-3	True	NA	18	True	AATAAA	-18	NA	81395267	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.4	chr10	+	1308	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-53	108	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1174.6459986831	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTATGATTTCTTTC	-2	True	NA	19	True	AATAAA	-19	NA	81395268	81401999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400646_81400745_81401125_81401201_81401305
ES.3397.5	chr10	+	3014	6	FSM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	-1604	0	-48	0	multi-exon	FALSE	canonical	3	2772	junction_5	277.977984739799	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTGTGTCCCTGCTTC	3	True	NA	13	True	AATAAA	-15	NA	81395273	81402195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ES.3397.7	chr10	+	1410	6	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-48	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1220.81851231049	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAACATGAAAAGG	3	True	NA	-9	True	NA	NA	NA	81395273	81402173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399928_81399987_81400662_81400745_81401125_81401201_81401305
ES.3397.9	chr10	+	1458	7	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	-39	107	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1134.94414938455	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTTTATGATTTCTTT	12	False	NA	18	True	AATAAA	-18	NA	81395282	81401998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400306_81400552_81400681_81400745_81401125_81401201_81401305
ES.33970.1	chr8	+	1051	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-70	696	-70	174	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGTGACCATGTCCGT	NA	False	NA	NA	False	AATAAA	-19	NA	112667264	112679548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.2	chr8	+	891	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-29	815	-29	55	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTTGCTTCACTAGA	NA	False	NA	NA	False	ATTAAA	-28	NA	112667305	112679429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.3	chr8	+	667	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-12	1022	-12	-152	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTTTTTGTGCACTG	NA	False	NA	NA	False	AGTAAA	-24	NA	112667322	112679222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.4	chr8	+	2525	5	NNC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	-8	1772	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1212.84734715462	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTTGACTTCATTC	NA	False	NA	12	True	ATTAAA	-20	NA	112667326	112682016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946_112679942_112680873
ES.33970.5	chr8	+	1708	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-8	-23	-8	23	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGATTTTGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	112667326	112680267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.6	chr8	+	1292	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	-3	388	-3	-388	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTATTGGTGTT	NA	False	NA	2	True	AATATA	-7	NA	112667331	112679856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.7	chr8	+	3446	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	2	-1771	2	1771	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTGACTTCATT	NA	False	NA	11	True	ATTAAA	-19	NA	112667336	112682015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ES.33970.8	chr8	+	891	3	NNC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	1185	172	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	1367.5	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGTGTGACCATGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	112668884	112679546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_112669003_112669133_112669307_112678946
ES.33970.9	chr8	+	6547	1	NIC	ENSMUSG00000031950.8	novel	1677	4	NA	NA	5301	173	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112673000	112679547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_112673000_112679500
ES.33971.1	chr8	+	173	1	Intergenic	novelGene_27682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGCTGGCAGGAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	112685396	112685569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112685400_112685600
ES.33972.1	chr8	+	178	1	Intergenic	novelGene_27684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAATATAAT	1003	False	NA	NA	False	NA	NA	NA	112699454	112699632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112699500_112699600
ES.33973.1	chr8	+	1693	1	Intergenic	novelGene_27685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAACAAAGA	1478	False	NA	NA	False	NA	NA	NA	112699929	112701622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112699900_112701600
ES.33974.1	chr8	+	4312	1	Antisense	novelGene_ENSMUSG00000031949.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112708835	112713147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112708800_112713100
ES.33975.1	chr8	-	3630	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	9	736	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9258981932099	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTTTAAATTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	112660422	112637906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640743_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.10	chr8	-	2852	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	95.4585424848574	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTTTCCCTTGGCTTCT	NA	False	NA	-7	True	ATTAAA	-12	NA	112660422	112638645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645497_112645589_112659991_112660162_112660259
ES.33975.11	chr8	-	2898	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.5866792895132	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTTTCCCTTGGCTTCT	NA	False	NA	-7	True	ATTAAA	-12	NA	112660424	112638645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644916_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.12	chr8	-	2813	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.775962735679	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTTTCCCTTGGCTTCT	NA	False	NA	-7	True	ATTAAA	-12	NA	112660424	112638645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645510_112659991_112660162_112660259
ES.33975.13	chr8	-	3090	9	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	126.060253450483	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAACGTTTCCCTTGGC	NA	False	NA	-11	True	ATTAAA	-8	NA	112660426	112638649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112653477_112653558_112654180_112654301_112659991_112660162_112660259
ES.33975.15	chr8	-	2995	8	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	20	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	115.070696991556	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAACGTTTCCCTTGGC	NA	False	NA	-11	True	ATTAAA	-8	NA	112660411	112638649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112654180_112654301_112659991_112660162_112660259
ES.33975.16	chr8	-	2653	6	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	7022	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	103.634743209022	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAACGTTTCCCTTGGC	NA	False	NA	-11	True	ATTAAA	-8	NA	112647770	112638649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112647670
ES.33975.19	chr8	-	2443	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	82	459	0	-397	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATTATGTGCCTGAGT	NA	False	NA	-3	True	NA	NA	NA	112660431	112639101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.2	chr8	-	3534	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	85	-635	3	635	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCTTGGAATGTAACC	NA	False	NA	NA	False	ATTAAA	-21	NA	112660428	112638007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.20	chr8	-	2550	8	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	-9	-397	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	113.023205130447	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATTATGTGCCTGAGT	NA	False	NA	-3	True	NA	NA	NA	112660440	112639101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112658190_112658289_112659991_112660162_112660259
ES.33975.23	chr8	-	2743	9	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	0	-428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	125.899699662072	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGGTACTAGTTTCTC	NA	False	NA	-34	True	AATAAA	-28	NA	112660431	112639132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112653477_112653558_112654180_112654432_112659991_112660162_112660259
ES.33975.24	chr8	-	2464	8	FSM	ENSMUSG00000031951.9	ENSMUST00000211866.2	2920	8	21	435	21	-435	multi-exon	FALSE	canonical	1	2	junction_6	117.289281309948	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACTCTCTGGTACTA	NA	False	NA	-41	True	AATAAA	-21	NA	112660410	112639139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112653477_112653558_112659991_112660162_112660259
ES.33975.25	chr8	-	1036	6	ISM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	70	2257	-12	-2195	5prime_fragment	FALSE	canonical	3	257	junction_2	4.66476151587624	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTGGTCATCCAT	NA	False	NA	NA	False	NA	NA	NA	112660443	112640899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.26	chr8	-	233	1	Intergenic	novelGene_27680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTCACAGAATG	NA	False	NA	NA	False	NA	NA	NA	112651222	112650989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112651000_112651200
ES.33975.27	chr8	-	1453	2	ISM	ENSMUSG00000031951.9	ENSMUST00000211866.2	2920	8	15	20161	15	-6461	5prime_fragment	FALSE	canonical	3	263	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATAAACAAAGCTTTAA	NA	False	NA	NA	False	ATTAAA	-9	NA	112660416	112658865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112660162_112660259
ES.33975.3	chr8	-	3896	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	14	629	intron_retention	FALSE	canonical	3	257	junction_2	4.66476151587624	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACAGGGTCTTGGAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	112660417	112638013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.4	chr8	-	3278	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	6	3	intron_retention	FALSE	canonical	3	257	junction_2	4.66476151587624	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTGGCTTCTGAACGG	NA	False	NA	-1	True	ATTAAA	-18	NA	112660425	112638639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.5	chr8	-	2912	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	72	0	-10	0	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660441	112638642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ES.33975.6	chr8	-	2798	7	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	-6760	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	96.6879286961695	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112667273	112638642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112667205
ES.33975.7	chr8	-	3140	8	NNC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	114.83866233698	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660418	112638642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112654180_112654432_112659991_112660162_112660259
ES.33975.8	chr8	-	2737	6	NIC	ENSMUSG00000031951.9	novel	2984	7	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	104.496124330044	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660410	112638642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112640742_112641120_112641227_112641888_112641971_112645459_112645589_112659991_112660162_112660259
ES.33975.9	chr8	-	2930	8	NNC	ENSMUSG00000031951.9	novel	2920	8	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	115.53654780004	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGTTTCCCTTGGCTTCT	NA	False	NA	-7	True	ATTAAA	-12	NA	112660425	112638645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112654180_112654218_112659991_112660162_112660259
ES.33976.1	chr8	-	2916	10	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	32	22549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0881295993214	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAGACCCTCATCGCA	NA	False	NA	NA	False	NA	NA	NA	112718902	112670990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112672442_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
ES.33976.11	chr8	-	2747	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	31	381	31	-381	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAGTTCCCAAATGCC	NA	False	NA	NA	False	ACTAAA	-13	NA	112718903	112693920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.12	chr8	-	1919	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	22	1218	22	-1218	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGCAGCTCTGGTG	NA	False	NA	NA	False	AATACA	-21	NA	112718912	112694757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.13	chr8	-	1991	10	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	65	-1218	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	21.5767364435763	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCAGCAGCTCTGGTG	NA	False	NA	NA	False	AATACA	-21	NA	112718869	112694757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112714000_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.14	chr8	-	179	1	Intergenic	novelGene_27683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAATAATAATT	NA	False	NA	NA	False	NA	NA	NA	112697151	112696972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112697000_112697200
ES.33976.15	chr8	-	2741	9	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.7082933460924	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGTGACTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	112718929	112697496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717029_112718812
ES.33976.16	chr8	-	2740	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	22	0	22	0	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGTGACTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	112718912	112697496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.17	chr8	-	3122	9	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	21.9569892061731	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCATAGTCTCTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	112718894	112698184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112715394_112716552_112716836_112717045_112718812
ES.33976.18	chr8	-	2036	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	29	697	29	-9	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTGCAAGAAGCATAG	NA	False	NA	NA	False	AATAAA	-13	NA	112718905	112698193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.19	chr8	-	3527	3	NIC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	35	-15135	intron_retention	FALSE	canonical	3	40	junction_2	13	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTACAGT	NA	False	NA	NA	False	NA	NA	NA	112718899	112713319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112716552_112716836_112717045_112718812
ES.33976.2	chr8	-	4121	1	Genic_Genomic	ENSMUSG00000031949.18	novel	NA	NA	NA	NA	21446	2062	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTAGGCAGTGTTGGT	NA	False	NA	NA	False	TTTAAA	-32	NA	112695598	112691477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_112691500_112695600
ES.33976.20	chr8	-	316	2	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	26	-20233	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACAGGATTCTGGGAT	NA	False	NA	-3	True	AATAAA	-21	NA	112718908	112718417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112718638_112718812
ES.33976.3	chr8	-	3988	4	ISM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	12902	-2062	11012	2062	3prime_fragment	FALSE	canonical	3	33	junction_1	11.4406682011537	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTAGGCAGTGTTGGT	NA	False	NA	NA	False	TTTAAA	-32	NA	112706032	112691477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930
ES.33976.4	chr8	-	1755	10	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	11	1705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.0881295993214	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTGTCTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	112718923	112691834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112692104_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
ES.33976.5	chr8	-	3106	10	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	35	7	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	16.2784413971666	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTTTTAATTACTTAT	NA	False	NA	-3	True	ATTAAA	-12	NA	112718899	112693532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
ES.33976.6	chr8	-	3134	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	31	-6	31	6	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTTTTTAATTACTTA	NA	False	NA	-4	True	ATTAAA	-11	NA	112718903	112693533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ES.33976.7	chr8	-	4713	10	NNC	ENSMUSG00000031949.18	novel	3159	10	NA	NA	32	-7	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	17.4674300087652	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGAAGTAGTAACATT	NA	False	NA	-17	True	TATAAA	-11	NA	112718902	112693546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112718638_112718812
ES.33976.9	chr8	-	2145	10	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.0881295993214	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGAAGTAGTAACATT	NA	False	NA	-17	True	TATAAA	-11	NA	112718899	112693546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112693623_112698129_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
ES.33977.1	chr8	+	2176	15	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTATGACTA	NA	False	NA	NA	False	NA	NA	NA	112720051	112737922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112720338_112721494_112721641_112723093_112723218_112724207_112724294_112724921_112725010_112725155_112725327_112725430_112725595_112726701_112726822_112728115_112728237_112728326_112728524_112729146_112729239_112729909_112730073_112732263_112732423_112734840_112735017_112737839
ES.33977.2	chr8	+	1598	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	112729454	112731052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112729500_112731100
ES.33977.3	chr8	+	5168	3	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAAAGCAGCAGTA	NA	False	NA	NA	False	NA	NA	NA	112729456	112736750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112731053_112731237_112734099_112736039
ES.33977.4	chr8	+	6597	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112729457	112736054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112729500_112736100
ES.33977.5	chr8	+	2414	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACTCAGGGCCAG	NA	False	NA	NA	False	NA	NA	NA	112729457	112731871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112729500_112731900
ES.33977.6	chr8	+	293	3	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAATTATGACT	NA	False	NA	NA	False	NA	NA	NA	112730016	112737921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_112730073_112732263_112732421_112737841
ES.33978.1	chr8	+	2278	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	-47	1329	-47	-1329	multi-exon	FALSE	canonical	3	135	junction_1	1.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCATTTTCTTTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	112737982	112745831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112738775_112741968_112742094_112744470
ES.33978.2	chr8	+	3546	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	14	0	10	0	multi-exon	FALSE	canonical	3	135	junction_1	1.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGTCTTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	112738043	112747160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112738775_112741968_112742094_112744470
ES.33978.3	chr8	+	1775	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	15	1770	11	-1770	multi-exon	FALSE	canonical	3	135	junction_1	1.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTTGGCTGTTGCTTT	NA	False	NA	NA	False	TATAAA	-18	NA	112738044	112745390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112738775_112741968_112742094_112744470
ES.33978.4	chr8	+	4185	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	66	-691	62	691	multi-exon	FALSE	canonical	3	135	junction_1	1.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGTGCCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	112738095	112747851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_112738775_112741968_112742094_112744470
ES.33978.5	chr8	+	3117	1	NIC	ENSMUSG00000033430.11	novel	3560	3	NA	NA	4681	-1329	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCATTTTCTTTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	112742714	112745831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_112742700_112745800
ES.33978.6	chr8	+	157	1	ISM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	8872	102	8868	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	112746901	112747058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_112746900_112747100
ES.33979.1	chr8	-	2093	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	-55	-30	-55	30	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCTGATGAGTGGT	NA	False	NA	26	True	NA	NA	NA	112738010	112720044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.10	chr8	-	2216	16	NIC	ENSMUSG00000031948.15	novel	2189	16	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	577.330623550223	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737925	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112736853_112736913_112737841
ES.33979.11	chr8	-	1943	14	NNC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	431.250143641173	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737906	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728130_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.12	chr8	-	3137	13	NIC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	1149	junction_9	194.939235546761	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737978	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.15	chr8	-	3307	15	NIC	ENSMUSG00000031948.15	novel	2189	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	76	junction_14	575.032776350663	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737910	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
ES.33979.16	chr8	-	2078	13	NIC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	7	-1	intron_retention	FALSE	canonical	3	1149	junction_9	188.772110551909	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737922	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.17	chr8	-	1924	14	NNC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	430.973289579947	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737908	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112724972_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.18	chr8	-	2114	15	NNC	ENSMUSG00000031948.15	novel	2131	15	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	532.165987033277	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737870	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112720339_112720615_112720808_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.2	chr8	-	2225	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	-91	-3	-34	3	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGTTACTTTTTCTC	NA	False	NA	-1	True	AATAAA	-19	NA	112737989	112720071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
ES.33979.20	chr8	-	1951	14	NNC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	427.726990846059	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCATGCAGTGTTACTT	NA	False	NA	-7	True	AATAAA	-13	NA	112737908	112720077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729149_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.3	chr8	-	2323	17	NIC	ENSMUSG00000031948.15	novel	2189	16	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	620.454114817325	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCAGTGTTACTTTTTC	NA	False	NA	-3	True	AATAAA	-17	NA	112737972	112720073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112736853_112736913_112737841
ES.33979.5	chr8	-	5188	9	NIC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-38	0	intron_retention	FALSE	canonical	3	1149	junction_5	216.590627682732	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737993	112720074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112721640_112723091_112723219_112724207_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.6	chr8	-	3229	12	NIC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1149	junction_8	195.358454180603	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737965	112720074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ES.33979.8	chr8	-	2283	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	-95	1	-38	-1	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	112737993	112720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
ES.3398.1	chr10	-	159	1	Intergenic	novelGene_2622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAAATAAAGG	9675	False	NA	NA	False	NA	NA	NA	81397996	81397837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81397800_81398000
ES.33980.1	chr8	+	180	1	Intergenic	novelGene_27686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAAGGAGCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	112767295	112767475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112767300_112767500
ES.33981.1	chr8	-	171	1	Intergenic	novelGene_27687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATCTATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	112769287	112769116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112769100_112769300
ES.33982.1	chr8	+	202	1	Intergenic	novelGene_27688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAAATAAAATATAA	NA	False	NA	NA	False	NA	NA	NA	112800716	112800918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112800700_112800900
ES.33983.1	chr8	+	176	1	Intergenic	novelGene_27689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGACCTCTAGCCTAGA	NA	False	NA	NA	False	NA	NA	NA	112823282	112823458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112823300_112823500
ES.33984.1	chr8	+	3910	1	Intergenic	novelGene_27690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTGGTATGCTGGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	112923356	112927266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_112923400_112927300
ES.33985.1	chr8	-	158	1	Intergenic	novelGene_27691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAATTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	112947729	112947571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_112947600_112947700
ES.33986.1	chr8	-	212	1	Intergenic	novelGene_27692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAACATGTGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	113787732	113787520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_113787500_113787700
ES.33987.1	chr8	+	6547	2	Intergenic	novelGene_27693	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	114007439	114014109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_114012884_114013006
ES.33988.1	chr8	+	4900	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	-42	-1388	-42	15	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGTAACATGGAAGG	NA	False	NA	35	True	AATAAA	-36	NA	114362176	114371826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ES.33988.10	chr8	+	5598	1	Genic_Genomic	ENSMUSG00000033409.15_ENSMUSG00000078908.11	novel	NA	NA	NA	NA	-2548	1083	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGAGGTTCTGGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	114367296	114372894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_114367300_114372900
ES.33988.2	chr8	+	3500	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	-29	-1	-29	1	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGAGCATTCTTGTTT	NA	False	NA	NA	False	AAGAAA	-22	NA	114362189	114370439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ES.33988.3	chr8	+	3183	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	-20	307	-20	-307	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAAGACCCATTACTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	114362198	114370131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ES.33988.4	chr8	+	4925	7	NNC	ENSMUSG00000078908.11	novel	3470	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.8473399243029	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTCAGCCTCTTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	114362216	114371810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114367944_114368026_114368561
ES.33988.5	chr8	+	5211	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	-213	0	35	0	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362253	114371811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ES.33988.6	chr8	+	4876	4	NIC	ENSMUSG00000078908.11	novel	4998	5	NA	NA	-34	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	21.2132034355964	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTACCCTCTCAGCCT	NA	False	NA	12	True	AATAAA	-13	NA	114362432	114371803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_114362902_114364372_114364718_114365166_114365987_114368561
ES.33988.7	chr8	+	3331	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	-15	1682	-15	-309	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTCAAGACCCATTACT	NA	False	NA	NA	False	ATTAAA	-13	NA	114362451	114370129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ES.33988.8	chr8	+	2587	3	ISM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	234	3479	-14	-3479	intron_retention	FALSE	canonical	3	45	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGGATCCAGTGTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	114362452	114366959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_114362902_114364372_114364718_114365166
ES.33988.9	chr8	+	3701	3	ISM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	2729	488	2729	-488	3prime_fragment	FALSE	canonical	3	34	junction_1	3	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGGGCCCTAGGAGT	NA	False	NA	NA	False	GATAAA	-23	NA	114365195	114371323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_114365987_114366318_114366467_114368561
ES.33989.1	chr8	-	154	1	Intergenic	novelGene_27694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	114539573	114539419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_114539400_114539600
ES.3399.1	chr10	+	2722	20	NNC	ENSMUSG00000034771.16	novel	2746	20	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.59812910007252	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTGTGTGTGTGTG	1528	False	NA	NA	False	AATATA	-19	NA	81411115	81426307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81411526_81411638_81411737_81412069_81412134_81412431_81412477_81413462_81413526_81416090_81416166_81416317_81416502_81416728_81416749_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422168_81422688_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ES.33990.1	chr8	-	179	1	Intergenic	novelGene_27695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	114839471	114839292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_114839300_114839500
ES.33991.1	chr8	+	4707	1	NIC	ENSMUSG00000031767.14	novel	3543	4	NA	NA	16384	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGACTCCTGGAGGTCT	7195	False	NA	NA	False	NA	NA	NA	114876765	114881472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_114876800_114881500
ES.33992.1	chr8	-	204	1	Intergenic	novelGene_27696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115064838	115064634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115064600_115064800
ES.33993.1	chr8	+	1872	1	ISM	ENSMUSG00000046844.7	ENSMUST00000049509.7	3666	9	166569	1	4083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTCTTATGGCATCCT	NA	False	NA	NA	False	AATAAA	-15	NA	115098938	115100810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_115098900_115100800
ES.33994.1	chr8	+	2951	3	NNC	ENSMUSG00000008874.4	novel	591	3	NA	NA	-18718	2282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCAGCGTGGATGTGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	115126107	115154868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115126301_115149659_115149744_115152194
ES.33995.1	chr8	-	220	1	Intergenic	novelGene_27697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTTCTCATTTTATCT	NA	False	NA	NA	False	NA	NA	NA	115162122	115161902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115161900_115162100
ES.33996.1	chr8	+	3839	5	FSM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-50	-8	-3	8	multi-exon	FALSE	canonical	3	16	junction_4	47.8663503935698	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTTTGGGAATTATTG	NA	False	NA	14	True	AATAAA	-14	NA	115166391	115180566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256
ES.33996.10	chr8	+	737	6	NNC	ENSMUSG00000004637.16	novel	2244	9	NA	NA	20	84535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.0363130751079	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAAGTCATTTGCAGG	NA	False	NA	NA	False	AATAAA	-16	NA	115166461	115325563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115325392
ES.33996.11	chr8	+	566	5	NNC	ENSMUSG00000004637.16	novel	3781	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	54.3507129668048	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTAGGTGGCTTTTGGG	NA	False	NA	6	True	AATAAA	-6	NA	115166466	115180558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115180446
ES.33996.12	chr8	+	1724	9	FSM	ENSMUSG00000004637.16	ENSMUST00000109108.9	1771	9	34	13	27	-13	multi-exon	FALSE	canonical	0	0	junction_8	40.6294228361664	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACATAAATACAGAAA	NA	False	NA	NA	False	AATAAA	-6	NA	115166468	115601965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115601340
ES.33996.13	chr8	+	2340	9	NNC	ENSMUSG00000004637.16	novel	2244	9	NA	NA	29	53124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.6294228361664	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGAGGCTTGCAAGTT	NA	False	NA	NA	False	AATAAA	-30	NA	115166470	115498543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115497300
ES.33996.14	chr8	+	750	6	NNC	ENSMUSG00000004637.16	novel	2244	9	NA	NA	101	28301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.0363130751079	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTATGTCTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	115166542	115269329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115269064
ES.33996.15	chr8	+	100	1	Intergenic	novelGene_27699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	115278370	115278470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115278400_115278500
ES.33996.16	chr8	+	1368	1	Intergenic	novelGene_27701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCAAGGTTTTTTTGTT	NA	False	NA	NA	False	AATAAA	-35	NA	115332712	115334080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115332700_115334100
ES.33996.17	chr8	+	3853	1	Genic_Genomic	ENSMUSG00000004637.16	novel	NA	NA	NA	NA	-1577	-95613	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	115333598	115337451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_115333600_115337500
ES.33996.18	chr8	+	3736	1	Intergenic	novelGene_27702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	115456625	115460361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115456600_115460400
ES.33996.19	chr8	+	82	1	Intergenic	novelGene_27704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-33	NA	115544890	115544972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115544900_115545000
ES.33996.2	chr8	+	2788	5	FSM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-31	1024	16	-1024	multi-exon	FALSE	canonical	3	16	junction_4	47.8663503935698	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCCTTTATGTAATGG	NA	False	NA	NA	False	ATTAAA	-14	NA	115166410	115179534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256
ES.33996.3	chr8	+	5997	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-31	-7	16	7	intron_retention	FALSE	canonical	3	123	junction_1	3.39934634239519	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTTTTGGGAATTATT	NA	False	NA	13	True	AATAAA	-13	NA	115166410	115180565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
ES.33996.4	chr8	+	1513	8	ISM	ENSMUSG00000004637.16	ENSMUST00000160862.8	1715	9	-4	6052	-4	-6052	5prime_fragment	FALSE	canonical	3	58	junction_7	25.2303671905787	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTTGCAAATGTGGAT	NA	False	NA	NA	False	AATAGA	-20	NA	115166430	115439367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726
ES.33996.5	chr8	+	3871	6	NNC	ENSMUSG00000004637.16	novel	3781	5	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	61.9464284684759	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTTTTGGGAATTATT	NA	False	NA	13	True	AATAAA	-13	NA	115166431	115180565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115176791_115176865_115177256
ES.33996.6	chr8	+	3754	6	NNC	ENSMUSG00000004637.16	novel	3781	5	NA	NA	1	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	58.2511802455538	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTGGCTTTTGGGAAT	NA	False	NA	9	True	AATAAA	-9	NA	115166435	115180561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256_115177461_115177496
ES.33996.7	chr8	+	652	4	ISM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	-3	5310	-3	-5310	5prime_fragment	FALSE	canonical	3	123	junction_1	3.39934634239519	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAGTGTTACAGTGTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	115166438	115175248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899
ES.33996.8	chr8	+	1576	9	NNC	ENSMUSG00000004637.16	novel	1715	9	NA	NA	1	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.8039908039506	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCCATCTTTTCCGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	115166442	115445327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175040_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115444837
ES.33996.9	chr8	+	1487	10	NNC	ENSMUSG00000004637.16	novel	1771	9	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	47.1540684653987	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACATAAATACAGAAA	NA	False	NA	NA	False	AATAAA	-6	NA	115166442	115601965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115496822_115496925_115601705
ES.33997.1	chr8	-	1044	1	Intergenic	novelGene_27698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115239454	115238410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115238400_115239500
ES.33998.1	chr8	-	3437	1	Intergenic	novelGene_27700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAACACCTGCCAT	NA	False	NA	NA	False	NA	NA	NA	115334134	115330697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115330700_115334100
ES.33999.1	chr8	-	4670	1	Intergenic	novelGene_27703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGTTCAAATTTGTAC	NA	False	NA	NA	False	NA	NA	NA	115539113	115534443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115534400_115539100
ES.34.10	chr1	+	6087	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-11	-407	intron_retention	FALSE	canonical	0	0	junction_12	44.1213312520778	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284857	6345392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308634_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315888_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.11	chr1	+	5872	14	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-8	612	intron_retention	FALSE	canonical	3	4	junction_2	38.7446503274205	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAATAATATCATTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	6284860	6322094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6298163_6298274_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.12	chr1	+	6073	14	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-4	24771	-4	619	intron_retention	FALSE	canonical	3	127	junction_3	10.5572544395679	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCATTTGTTTCACAT	NA	False	NA	NA	False	AATAAA	-20	NA	6284864	6322101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289
ES.34.13	chr1	+	6278	25	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-4	-407	intron_retention	FALSE	canonical	0	0	junction_1	43.3790624098257	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284864	6345392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6293822_6293970_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.14	chr1	+	5313	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-4	2298	-4	-139	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCATTGTTGGGTTTTTT	NA	False	NA	10	True	GATAAA	-17	NA	6284864	6344574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.15	chr1	+	7351	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-3	259	-3	-259	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCACTCAAGCATTTGA	NA	False	NA	NA	False	AATAAA	-33	NA	6284865	6346613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.16	chr1	+	5201	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-2	-144	intron_retention	FALSE	canonical	0	0	junction_17	37.4111170966554	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGCCATTGTTGGGT	NA	False	NA	5	True	GATAAA	-12	NA	6284866	6344569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333352_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.17	chr1	+	5399	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	5	10	intron_retention	FALSE	canonical	2	3	junction_6	37.5827253886284	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTTTTGTTTTGTTT	NA	False	NA	19	True	AATAAA	-25	NA	6284873	6344724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308634_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.18	chr1	+	6184	15	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	5	592	intron_retention	FALSE	canonical	0	0	junction_1	51.3481514084122	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAAACA	NA	False	NA	NA	False	TTTAAA	-38	NA	6284873	6322074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6293822_6293970_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289
ES.34.19	chr1	+	6176	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	5	-407	intron_retention	FALSE	canonical	1	1	junction_21	43.2743187891695	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284873	6345392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6335945_6336000_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.2	chr1	+	6024	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-31	24764	-31	626	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTTCACATGATGCAA	NA	False	NA	NA	False	AATAAA	-27	NA	6284837	6322108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.22	chr1	+	7472	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	6	129	6	-129	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTATTGTAGCCCC	NA	False	NA	NA	False	TATAAA	-11	NA	6284874	6346743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.23	chr1	+	5406	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	6	-141	intron_retention	FALSE	non_canonical	0	0	junction_1	48.217965761967	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCATTGTTGGGTTTT	NA	False	NA	8	True	GATAAA	-15	NA	6284874	6344572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6293822_6293927_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318418_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.26	chr1	+	6130	16	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	6	622	intron_retention	FALSE	canonical	0	0	junction_1	49.7426264775885	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTTTCACATGAT	NA	False	NA	NA	False	AATAAA	-23	NA	6284874	6322104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6293822_6293970_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.27	chr1	+	3772	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	8	26977	8	642	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTCATGATAATAAT	NA	False	NA	NA	False	AGTAAA	-8	NA	6284876	6319895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.28	chr1	+	6236	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	9	-290	intron_retention	FALSE	non_canonical	0	0	junction_6	37.9782546477186	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGGTGAAGTGGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	6284877	6345509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310174_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.29	chr1	+	5499	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-8	6	intron_retention	FALSE	canonical	1	1	junction_21	43.2743187891695	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGGTTTTGTTTT	NA	False	NA	15	True	AATAAA	-21	NA	6284878	6344720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6335945_6336000_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.31	chr1	+	5336	23	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-1	14	intron_retention	FALSE	canonical	1	1	junction_1	37.7828725025699	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTTTTGTTTCCAC	NA	False	NA	23	True	AATAAA	-29	NA	6284885	6344728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.32	chr1	+	6513	24	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	1	5	intron_retention	FALSE	canonical	3	11	junction_22	35.7659901183979	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTCAGTCCTTCAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	6284887	6345806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341043_6342924_6342996_6344421
ES.34.33	chr1	+	6036	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	2	-412	intron_retention	FALSE	canonical	0	0	junction_14	37.7668701897834	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTGTGTGCCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	6284888	6345387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318351_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.34	chr1	+	5588	16	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	2	628	intron_retention	FALSE	canonical	2	2	junction_15	36.6687272148292	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTCACATGATGCAACT	NA	False	NA	NA	False	AATAAA	-29	NA	6284888	6322110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6320778
ES.34.36	chr1	+	7353	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	2	-279	intron_retention	FALSE	canonical	1	1	junction_21	47.4607842504385	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTCATGCCTATAAA	NA	False	NA	NA	False	AATAAA	-13	NA	6284888	6346593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6335945_6336000_6338921_6338981_6340914_6341043_6342924_6342996_6344421
ES.34.37	chr1	+	4224	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	20	26513	2	1106	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACATCTTGAGAATCA	NA	False	NA	NA	False	NA	NA	NA	6284888	6320359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.38	chr1	+	5622	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	4	144	intron_retention	FALSE	canonical	0	0	junction_20	43.4893824845661	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAGTGTTGTTACCAGC	NA	False	NA	NA	False	AATAAA	-15	NA	6284890	6344858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6335948_6336000_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.40	chr1	+	5214	25	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	25	-142	intron_retention	FALSE	non_canonical	0	0	junction_15	37.2435443697592	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCATTGTTGGGTTT	NA	False	NA	7	True	GATAAA	-14	NA	6284911	6344571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6319277_6319325_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.42	chr1	+	5546	25	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	27	4	intron_retention	FALSE	canonical	0	0	junction_1	47.3998762011979	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCAAAATGGTTTTGTT	NA	False	NA	13	True	AATAAA	-19	NA	6284913	6344718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6293822_6293970_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341043_6342924_6342996_6344421
ES.34.46	chr1	+	6134	23	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	41	-292	intron_retention	FALSE	canonical	0	0	junction_18	37.4211015735134	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAACAGGGTGAAGTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	6284927	6345507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.47	chr1	+	6059	24	NIC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	41	-407	intron_retention	FALSE	canonical	3	11	junction_22	35.7659901183979	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284927	6345392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341043_6342924_6342996_6344421
ES.34.49	chr1	+	5969	15	NIC	ENSMUSG00000025907.15	novel	2712	14	NA	NA	-47	623	intron_retention	FALSE	canonical	1	1	junction_1	38.0829518878171	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTGTTTCACATGATG	NA	False	NA	NA	False	AATAAA	-24	NA	6285184	6322105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285477_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.34.5	chr1	+	6493	24	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-11	1	intron_retention	FALSE	canonical	2	3	junction_6	37.5827253886284	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTATTCAGTCCTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	6284857	6345802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308634_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.50	chr1	+	6495	24	NIC	ENSMUSG00000025907.15	novel	5707	21	NA	NA	-29	0	intron_retention	FALSE	canonical	1	1	junction_1	37.4226360135197	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTTCTATTCAGTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	6285202	6345799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_6285477_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.51	chr1	+	5813	23	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	13292	1484	-65	-411	3prime_fragment	FALSE	canonical	3	76	junction_18	29.0465570995745	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTGTGCCTTTTAA	NA	False	NA	NA	False	AATAAA	-13	NA	6298160	6345388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.52	chr1	+	6072	19	NNC	ENSMUSG00000025907.15	novel	5707	21	NA	NA	2527	8	intron_retention	FALSE	canonical	3	3	junction_1	40.2981557645594	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATGGTTTTGTTTTGT	NA	False	NA	17	True	AATAAA	-23	NA	6307029	6344722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6308689_6310180_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.53	chr1	+	4628	19	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	23616	2144	-2709	14	3prime_fragment	FALSE	canonical	3	76	junction_14	30.9147074351751	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTTTTGTTTCCAC	NA	False	NA	23	True	AATAAA	-29	NA	6308484	6344728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.6	chr1	+	6138	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-11	1480	-11	-407	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCCTTTTAAAGGT	NA	False	NA	NA	False	AATAAA	-17	NA	6284857	6345392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.7	chr1	+	5474	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-11	2144	-11	14	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTTTTGTTTCCAC	NA	False	NA	23	True	AATAAA	-29	NA	6284857	6344728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.8	chr1	+	6555	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	-11	1063	-11	8	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGTCCTTCAATGACAT	NA	False	NA	NA	False	AATAAA	-24	NA	6284857	6345809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ES.34.9	chr1	+	5945	15	NNC	ENSMUSG00000025907.15	novel	7607	24	NA	NA	-11	622	intron_retention	FALSE	canonical	2	3	junction_6	37.6555955676048	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTTTCACATGAT	NA	False	NA	NA	False	AATAAA	-23	NA	6284857	6322104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308634_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
ES.340.1	chr1	+	125	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38313402	38313527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38313400_38313500
ES.3400.1	chr10	-	1991	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	26	-2	1	1	multi-exon	TRUE	canonical	3	36	junction_10	15.2183321404185	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGTCCTTTACCCAGG	NA	False	NA	-13	True	NA	NA	NA	81436708	81426736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ES.3400.10	chr10	-	1761	11	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	22.2405035914208	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433197	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81433129
ES.3400.11	chr10	-	2097	13	NNC	ENSMUSG00000034758.13	novel	1961	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.6789743218498	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436707	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81435193_81436631
ES.3400.12	chr10	-	2744	8	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_7	18.0226614718973	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433165	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81431080_81431156_81432090_81433129
ES.3400.13	chr10	-	2154	9	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	25	junction_8	17.4458985151238	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433197	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81432090_81433129
ES.3400.14	chr10	-	2093	14	NNC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	21.9426363489173	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436707	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436526
ES.3400.15	chr10	-	1873	13	NNC	ENSMUSG00000034758.13	novel	1961	14	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.2528887553704	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436634	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431575_81431946_81434444_81434491_81434910_81434973_81435868_81435950_81436526
ES.3400.16	chr10	-	1756	11	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	15.7445228571716	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTTGTCCTTTACC	NA	False	NA	-17	True	NA	NA	NA	81433164	81426740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
ES.3400.17	chr10	-	3291	8	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	25	junction_7	17.9602736218419	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTTGTCCTTTACC	NA	False	NA	-17	True	NA	NA	NA	81433186	81426740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81430420_81431041_81431080_81431156_81431240_81431313_81432090_81433129
ES.3400.18	chr10	-	2078	10	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	25	junction_9	16.5604019752012	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTTGTCCTTTACC	NA	False	NA	-17	True	NA	NA	NA	81433197	81426740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81432090_81433129
ES.3400.2	chr10	-	2276	13	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	36	junction_9	15.8348683466442	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436706	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ES.3400.4	chr10	-	1951	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	9	1	9	0	multi-exon	FALSE	canonical	2	14	junction_8	19.8357158000858	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436700	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ES.3400.5	chr10	-	4292	5	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	716	0	intron_retention	FALSE	canonical	3	65	junction_1	7.43303437365925	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81432449	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81431080_81431156
ES.3400.6	chr10	-	2996	9	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	25	junction_8	16.8133131773604	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433178	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
ES.3400.7	chr10	-	1770	14	NNC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	21.3519396178377	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436663	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430246_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ES.3400.8	chr10	-	1838	10	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	25	junction_9	16.4991582276861	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433170	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431390_81431678_81432090_81433129
ES.3400.9	chr10	-	1884	11	FSM	ENSMUSG00000034758.13	ENSMUST00000128278.8	1855	11	-30	1	-30	0	multi-exon	FALSE	canonical	1	1	junction_10	22.2937210891318	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433454	81426738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433293
ES.34000.1	chr8	-	175	1	Intergenic	novelGene_27705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	115554717	115554542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115554500_115554700
ES.34001.1	chr8	+	1143	1	Intergenic	novelGene_27706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATATGCCTAACAAAGTG	NA	False	NA	NA	False	NA	NA	NA	115651201	115652344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115651200_115652300
ES.34002.1	chr8	-	2484	1	Intergenic	novelGene_27707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	9525	False	NA	NA	False	NA	NA	NA	115703991	115701507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115701500_115704000
ES.34003.1	chr8	+	2213	1	Intergenic	novelGene_27708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8016	False	NA	NA	False	NA	NA	NA	115723937	115726150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115723900_115726200
ES.34003.2	chr8	+	2400	1	Intergenic	novelGene_27709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGGTGCCACGAAATAAA	9686	False	NA	NA	False	GGGGCT	-42	NA	115725607	115728007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115725600_115728000
ES.34004.1	chr8	-	2793	1	Intergenic	novelGene_27710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTCCTTCTTGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	115736908	115734115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115734100_115736900
ES.34005.1	chr8	-	837	1	Intergenic	novelGene_27711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115737885	115737048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115737000_115737900
ES.34006.1	chr8	-	176	1	Intergenic	novelGene_27712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACCGGAACATCATAGTG	NA	False	NA	NA	False	NA	NA	NA	115751611	115751435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_115751400_115751600
ES.34007.1	chr8	+	2645	2	Intergenic	novelGene_27713	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAAAAAAGATGGTAC	NA	False	NA	NA	False	NA	NA	NA	115842936	115847258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_115844958_115846634
ES.34008.1	chr8	-	2981	1	Intergenic	novelGene_27714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-19	NA	116060339	116057358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_116057400_116060300
ES.34009.1	chr8	+	7381	1	Intergenic	novelGene_27715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCACCCTAGGCAATATA	NA	False	NA	NA	False	NA	NA	NA	117293343	117300724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117293300_117300700
ES.3401.1	chr10	+	2726	1	FSM	ENSMUSG00000074862.12	ENSMUST00000099442.4	2785	1	41	18	41	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAATAAAACAACAA	NA	False	NA	-21	True	AAAACA	-22	NA	81442899	81445625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81442900_81445600
ES.34010.1	chr8	+	178	1	Intergenic	novelGene_27717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGACTTGC	NA	False	NA	NA	False	NA	NA	NA	117379092	117379270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117379100_117379300
ES.34011.1	chr8	+	163	1	Intergenic	novelGene_27718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	117393218	117393381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117393200_117393400
ES.34012.1	chr8	-	8433	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	-345	-5677	-345	5677	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTTTGTTTGTGTCCC	1424	False	NA	-2	True	AATAAA	-16	NA	117460075	117295461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ES.34012.10	chr8	-	5077	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	106	5669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.5557674778587	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGTCTCCGTTTGTT	1875	False	NA	-10	True	AATAAA	-8	NA	117459624	117295469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117298242_117301138_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ES.34012.11	chr8	-	5534	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59814	3260	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATATTTCTGTGGTAA	NA	False	NA	NA	False	AGTAAA	-20	NA	117399916	117297878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ES.34012.12	chr8	-	5530	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	138	-3257	138	3257	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTATATTTCTGTGG	1907	False	NA	NA	False	AGTAAA	-17	NA	117459592	117297881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ES.34012.13	chr8	-	2743	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	-345	13	-345	-13	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	1424	False	NA	52	True	NA	NA	NA	117460075	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ES.34012.14	chr8	-	2282	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59793	-13	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	NA	False	NA	52	True	NA	NA	NA	117399937	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ES.34012.15	chr8	-	2500	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	-345	-13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	49.2456991917963	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	1424	False	NA	52	True	NA	NA	NA	117460075	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350765_117351106_117459536
ES.34012.16	chr8	-	2195	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59823	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.4046092010486	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	NA	False	NA	52	True	NA	NA	NA	117399907	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117301169_117301225_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ES.34012.17	chr8	-	2317	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	104436	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.8867297786024	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	NA	False	NA	52	True	NA	NA	NA	117355294	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117355181
ES.34012.18	chr8	-	2418	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59817	-13	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	56.0444430058568	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	NA	False	NA	52	True	NA	NA	NA	117399913	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117380271_117380432_117399859
ES.34012.19	chr8	-	1714	6	NIC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	101	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.4548345639163	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAACATGACTTACTA	1870	False	NA	52	True	NA	NA	NA	117459629	117301151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117459536
ES.34012.2	chr8	-	7996	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59769	5677	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTTTGTTTGTGTCCC	NA	False	NA	-2	True	AATAAA	-16	NA	117399961	117295461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
ES.34012.20	chr8	-	2321	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	139	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	57.3951573012275	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	1908	False	NA	32	True	NA	NA	NA	117459591	117301171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117357599_117357682_117459536
ES.34012.21	chr8	-	1591	6	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59819	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.4548345639163	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACGTGTAAGTGGAA	NA	False	NA	-30	True	AATATA	-8	NA	117399911	117301233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117399859
ES.34012.23	chr8	-	2208	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59811	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.8867297786024	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACGTGTAAGTGGAA	NA	False	NA	-30	True	AATATA	-8	NA	117399919	117301233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399833
ES.34012.24	chr8	-	5104	1	Intergenic	novelGene_27716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCAGAGTCTGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	117380259	117375155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_117375200_117380300
ES.34012.25	chr8	-	2179	1	Intergenic	novelGene_27719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	7203	False	NA	NA	False	NA	NA	NA	117454296	117452117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_117452100_117454300
ES.34012.3	chr8	-	8102	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59817	5676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.8421497328227	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCCGTTTGTTTGTGTCC	NA	False	NA	-3	True	AATAAA	-15	NA	117399913	117295462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117393950_117394106_117399859
ES.34012.4	chr8	-	7967	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59817	5676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.4813145109857	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCCGTTTGTTTGTGTCC	NA	False	NA	-3	True	AATAAA	-15	NA	117399913	117295462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117309745_117309957_117315988_117316162_117321700_117321919_117350518_117351106_117380271_117380432_117399859
ES.34012.5	chr8	-	7367	6	NIC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	136	5675	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.4548345639163	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCGTTTGTTTGTGTC	1905	False	NA	-4	True	AATAAA	-14	NA	117459594	117295463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117459536
ES.34012.6	chr8	-	8116	8	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59807	5675	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	56.0444430058568	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCGTTTGTTTGTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	117399923	117295463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117380271_117380432_117399859
ES.34012.7	chr8	-	7948	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59841	5675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.8867297786024	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCCGTTTGTTTGTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	117399889	117295463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399833
ES.34012.8	chr8	-	7356	6	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59822	5673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.4548345639163	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCGTTTGTTTGTG	NA	False	NA	-6	True	AATAAA	-12	NA	117399908	117295465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117399859
ES.34012.9	chr8	-	6409	3	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	153760	5669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTGTCTCCGTTTGTT	NA	False	NA	-10	True	AATAAA	-8	NA	117305970	117295469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117297216_117297427_117302027_117305906
ES.34013.1	chr8	+	155	1	Intergenic	novelGene_27720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	8645	False	NA	NA	False	NA	NA	NA	117469851	117470006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117469900_117470000
ES.34014.1	chr8	+	172	1	Intergenic	novelGene_27721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	117594959	117595131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117595000_117595100
ES.34015.1	chr8	+	233	1	Intergenic	novelGene_27722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117608840	117609073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117608800_117609100
ES.34016.1	chr8	+	1958	1	Intergenic	novelGene_27724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGTTGGAGGAGTGCG	NA	False	NA	NA	False	NA	NA	NA	117632208	117634166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117632200_117634200
ES.34017.1	chr8	+	1820	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-49	-3	-39	-1	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTCCTTTGGATGAAT	NA	False	NA	11	True	AATAAA	-19	NA	117648429	117668245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.10	chr8	+	1947	13	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	112.088754515736	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTCCTTTGGATGAA	NA	False	NA	10	True	AATAAA	-18	NA	117648467	117668244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117659530_117659697_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.11	chr8	+	4092	10	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_8	126.1744823647	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTCCTTTGGATGAA	NA	False	NA	10	True	AATAAA	-18	NA	117648467	117668244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117655711_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117663900_117664014_117667182
ES.34017.12	chr8	+	3883	12	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	89.4279339574656	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648468	117668242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117655711_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.13	chr8	+	4265	11	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	221	junction_1	43.150434528519	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648478	117668243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.14	chr8	+	2618	1	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	12	1656	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	117648497	117651115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648500_117651100
ES.34017.16	chr8	+	2186	13	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.839567493843	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCATTATCAGTTCCTT	NA	False	NA	2	True	AATAAA	-10	NA	117648498	117668236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652164_117652609_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.17	chr8	+	2761	10	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	22	2418	15	-2355	5prime_fragment	FALSE	canonical	3	221	junction_1	25.086516962969	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGTATAAGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	117648500	117665824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900
ES.34017.19	chr8	+	4017	13	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	127.210100708325	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648500	117668242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117655711_117657877_117658332_117658410_117659530_117659697_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.2	chr8	+	5125	10	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-21	-17	intron_retention	FALSE	canonical	3	221	junction_1	45.4739105774935	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTTCTCGTGATCTTT	NA	False	NA	6	True	AATATA	-2	NA	117648447	117668162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117664014_117667182_117667310_117667573
ES.34017.20	chr8	+	3363	11	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	15	1	intron_retention	FALSE	canonical	3	221	junction_1	43.1281810420982	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648500	117668243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.21	chr8	+	3974	10	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	15	-16	intron_retention	FALSE	canonical	3	221	junction_1	44.9290249610496	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTCTCGTGATCTTTT	NA	False	NA	7	True	AATATA	-3	NA	117648500	117668163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117664014_117667182_117667310_117667573
ES.34017.22	chr8	+	3592	7	NIC	ENSMUSG00000031756.6	novel	1616	10	NA	NA	4375	-1	intron_retention	FALSE	canonical	3	259	junction_3	45.7772384002744	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCAGTTCCTTTGGAT	NA	False	NA	7	True	AATAAA	-15	NA	117657222	117668241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117657877_117658332_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.23	chr8	+	7951	2	ISM	ENSMUSG00000031756.6	ENSMUST00000212184.2	2497	9	6214	3	6214	1	intron_retention	FALSE	canonical	3	267	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117659061	117668243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117660203_117661433
ES.34017.24	chr8	+	5162	2	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	9969	0	intron_retention	FALSE	canonical	3	261	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117662816	117668242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117667310_117667573
ES.34017.3	chr8	+	4359	11	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-19	1	intron_retention	FALSE	canonical	1	5	junction_4	93.2667679294185	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCAGTTCCTTTGGATGA	NA	False	NA	9	True	AATAAA	-17	NA	117648449	117668243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117655711_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ES.34017.4	chr8	+	1336	9	NNC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	93.7115754589581	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648457	117668242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660109_117667268_117667310_117667573
ES.34017.6	chr8	+	5864	10	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	221	junction_1	24.9730719173204	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCAGTTCCTTTGGAT	NA	False	NA	7	True	AATAAA	-15	NA	117648460	117668241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117667310_117667573
ES.34017.7	chr8	+	5709	9	NIC	ENSMUSG00000031756.6	novel	1768	12	NA	NA	-8	0	intron_retention	FALSE	canonical	3	221	junction_1	47.331114237888	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648460	117668242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117660203_117661433_117664014_117667182_117667310_117667573
ES.34017.8	chr8	+	2108	2	FSM	ENSMUSG00000031756.6	ENSMUST00000212578.2	447	2	-3	-1658	-3	1658	multi-exon	FALSE	canonical	3	221	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	117648465	117651117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117648523_117649066
ES.34017.9	chr8	+	3708	9	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	-11	2414	-1	-2351	intron_retention	FALSE	canonical	3	221	junction_1	26.2666613790181	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTATAAGTGTTTTGCC	NA	False	NA	NA	False	AATAAA	-21	NA	117648467	117665828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932
ES.34018.1	chr8	-	5304	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	-475	-3370	-475	3370	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTAGACTGTTCATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	117648669	117612053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ES.34018.10	chr8	-	4574	3	NNC	ENSMUSG00000014633.16	novel	523	3	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	11	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTCCCTTTCTTTAA	NA	False	NA	-6	True	AATAAA	-14	NA	117648198	117616257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117616599_117637866_117641991_117648089
ES.34018.11	chr8	-	4118	5	NNC	ENSMUSG00000014633.16	novel	793	5	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	156.296193171811	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCTCCCTTTCTTTAA	NA	False	NA	-6	True	AATAAA	-14	NA	117648158	117616257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117616599_117620826_117620899_117637866_117638661_117639148_117641991_117648089
ES.34018.12	chr8	-	2570	2	ISM	ENSMUSG00000014633.16	ENSMUST00000128304.2	394	3	-576	19624	-486	-19624	5prime_fragment	FALSE	canonical	3	345	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTGTGTGGACATCT	NA	False	NA	NA	False	NA	NA	NA	117648680	117635994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117637974_117648089
ES.34018.2	chr8	-	198	1	Intergenic	novelGene_27723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTCATGGCGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	117613026	117612828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_117612800_117613000
ES.34018.3	chr8	-	1557	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	19	-117	3	117	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGAAATTTTACTAG	NA	False	NA	NA	False	AATACA	-17	NA	117648175	117615306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ES.34018.4	chr8	-	1426	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	17	16	1	-16	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAGCTAATCAATTCA	NA	False	NA	NA	False	AATAAA	-16	NA	117648177	117615439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ES.34018.5	chr8	-	644	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	-8	823	-8	10	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTAACCTCTTCGGGG	NA	False	NA	5	True	AATAAA	-25	NA	117648202	117616246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ES.34018.6	chr8	-	1267	5	NNC	ENSMUSG00000014633.16	novel	793	5	NA	NA	-513	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.296193171811	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648707	117616256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117616599_117620826_117620899_117637866_117637974_117641862_117641991_117648089
ES.34018.7	chr8	-	653	4	FSM	ENSMUSG00000014633.16	ENSMUST00000131616.8	876	4	-16	239	1	0	multi-exon	FALSE	canonical	2	3	junction_2	157.584545209512	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648177	117616256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117620826_117620899_117637822_117637974_117648089
ES.34018.8	chr8	-	443	4	NNC	ENSMUSG00000014633.16	novel	793	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	149.010812433938	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648172	117616256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117616438_117620826_117620899_117637866_117637974_117648089
ES.34018.9	chr8	-	577	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	-39	-15	-23	0	multi-exon	FALSE	canonical	3	30	junction_1	157.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648217	117616256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117616599_117637866_117637974_117648089
ES.34019.1	chr8	+	4902	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	-24	-1	-24	1	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTGAATCTTGTC	NA	False	NA	25	True	ATTAAA	-19	NA	117670107	117687185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.10	chr8	+	4381	3	NIC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	12	-2198	intron_retention	FALSE	canonical	3	315	junction_2	17	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTATGTTTGCTCCT	NA	False	NA	15	True	TATAAA	-21	NA	117670143	117684986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117670490_117679612_117681653_117682991
ES.34019.13	chr8	+	8840	2	Intergenic	novelGene_27725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117670649	117679558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117678492_117678560
ES.34019.14	chr8	+	6883	3	ISM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	7116	1	7116	-1	3prime_fragment	FALSE	canonical	3	272	junction_1	21.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCTGTGTGAATCTTG	NA	False	NA	23	True	ATTAAA	-17	NA	117677247	117687183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117679739_117681452_117681653_117682991
ES.34019.15	chr8	+	2454	3	ISM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	9342	2204	9342	-2204	3prime_fragment	FALSE	canonical	3	272	junction_1	21.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATGTCGCCTATGTTT	NA	False	NA	9	True	TATAAA	-15	NA	117679473	117684980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117679739_117681452_117681653_117682991
ES.34019.16	chr8	+	3243	1	ISM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	13636	174	13636	-174	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTGTGTCTGTGGCG	NA	False	NA	NA	False	AATATA	-24	NA	117683767	117687010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117683800_117687000
ES.34019.2	chr8	+	2769	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	-19	2127	-19	-2127	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGAACTGTTTAGCTAAT	NA	False	NA	86	True	TTTAAA	-26	NA	117670112	117685057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.3	chr8	+	2611	5	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	-19	-2204	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	137.827791101795	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATGTCGCCTATGTTT	NA	False	NA	9	True	TATAAA	-15	NA	117670112	117684980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117670169_117670249_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.4	chr8	+	4808	5	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.827791101795	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCTGTGTGAATCTTG	NA	False	NA	23	True	ATTAAA	-17	NA	117670114	117687183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117670170_117670254_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.5	chr8	+	4751	3	NIC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	156	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCTGTGTGAATCTTG	NA	False	NA	23	True	ATTAAA	-17	NA	117670130	117687183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117670490_117681452_117681653_117682991
ES.34019.6	chr8	+	9017	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	-4140	0	4140	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCTCGTGAGTTC	NA	False	NA	NA	False	NA	NA	NA	117670131	117691324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.7	chr8	+	1172	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	5	3700	5	-3700	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGGTAAAAGCCTGTG	NA	False	NA	NA	False	AATACA	-13	NA	117670136	117683484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ES.34019.8	chr8	+	4654	4	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	6	-7	at_least_one_novel_splicesite	TRUE	non_canonical	1	3	junction_2	146.843075726739	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTACCTTTCTGTGTGA	NA	False	NA	17	True	ATTAAA	-11	NA	117670137	117687177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117670169_117670252_117670490_117681452_117681653_117682991
ES.34019.9	chr8	+	2609	5	NNC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	7	-2201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	137.827791101795	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCGCCTATGTTTGCT	NA	False	NA	12	True	TATAAA	-18	NA	117670138	117684983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991_117683435_117683494
ES.3402.1	chr10	-	154	1	Intergenic	novelGene_2623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	9019	False	NA	NA	False	NA	NA	NA	81455438	81455284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81455300_81455400
ES.34020.1	chr8	-	5881	2	Antisense	novelGene_ENSMUSG00000047388.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGCACGTGTCTCTGT	3251	False	NA	NA	False	AATAAA	-15	NA	117689038	117682949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_117687748_117687955
ES.34021.1	chr8	-	2998	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	-22	0	-6	0	multi-exon	FALSE	canonical	2	7	junction_1	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCTCTCACTGTTTCT	8519	False	NA	NA	False	AATAAA	-28	NA	117705704	117696332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117698896_117700190_117700439_117705517
ES.34021.2	chr8	-	3007	3	NNC	ENSMUSG00000031847.9	novel	1482	3	NA	NA	-33	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAATTGGCTCTCTC	8492	False	NA	NA	False	AATAAA	-19	NA	117705731	117696341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117698896_117700203_117700439_117705513
ES.34021.3	chr8	-	4246	2	NIC	ENSMUSG00000031847.9	novel	1482	3	NA	NA	14	-15	intron_retention	FALSE	canonical	1	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCAAAGAGAAATTGGC	8555	False	NA	NA	False	AATAAA	-13	NA	117705668	117696347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117700439_117705513
ES.34021.4	chr8	-	1239	1	ISM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	7601	510	7601	-510	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGAATTGCTTAGAGTA	NA	False	NA	NA	False	ATTAAA	-18	NA	117698081	117696842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117696800_117698100
ES.34021.5	chr8	-	2771	2	NIC	ENSMUSG00000031847.9	novel	2976	3	NA	NA	1	-1	intron_retention	FALSE	canonical	3	11	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGCCTGAAACTCATT	8526	False	NA	NA	False	AATATA	-15	NA	117705697	117697847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117700439_117705517
ES.34021.6	chr8	-	1490	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	-9	1	-9	-1	multi-exon	FALSE	canonical	1	4	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGCCTGAAACTCATT	8516	False	NA	NA	False	AATATA	-15	NA	117705707	117697847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117698896_117700190_117700439_117705513
ES.34021.7	chr8	-	1444	3	NNC	ENSMUSG00000031847.9	novel	2976	3	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCTGCCTGAAACTCA	8543	False	NA	NA	False	AATATA	-13	NA	117705680	117697849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117698896_117700203_117700439_117705517
ES.34022.1	chr8	+	3224	1	Antisense	novelGene_ENSMUSG00000034424.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAACCAACCAGCAAA	7469	False	NA	NA	False	NA	NA	NA	117709663	117712887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_117709700_117712900
ES.34022.2	chr8	+	178	1	Intergenic	novelGene_27726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGCTTGCTG	9068	False	NA	NA	False	NA	NA	NA	117711262	117711440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117711300_117711400
ES.34023.1	chr8	+	3109	1	Antisense	novelGene_ENSMUSG00000034424.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAAGCGGAGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	117714169	117717278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_117714200_117717300
ES.34024.1	chr8	-	3136	1	Genic_Genomic	ENSMUSG00000034424.6	novel	NA	NA	NA	NA	6560	144	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAGGCCAGGGGCTAG	2683	False	NA	NA	False	NA	NA	NA	117711540	117708404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_117708400_117711500
ES.34024.10	chr8	-	5301	4	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	64	162	64	-162	intron_retention	FALSE	canonical	3	1952	junction_3	93.8982901276104	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720212	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862
ES.34024.12	chr8	-	1136	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	64	-163	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTGTGATTTTTATT	NA	False	NA	-10	True	AATAAA	-15	NA	117720212	117708711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
ES.34024.2	chr8	-	1368	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	57	18	57	-18	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	117720219	117708566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ES.34024.3	chr8	-	1282	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	9	152	9	-152	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTTGGATATTAAT	NA	False	NA	1	True	AATAAA	-26	NA	117720267	117708700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ES.34024.4	chr8	-	4693	4	NNC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	57	-160	intron_retention	FALSE	canonical	0	0	junction_3	1013.14340325324	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGATTTTTATTTGG	NA	False	NA	-7	True	AATAAA	-18	NA	117720219	117708708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117709466_117710546_117710679_117714051_117715943_117718306
ES.34024.5	chr8	-	1383	6	NNC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	65	-162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1019.79809766443	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720211	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117718306_117718474_117720026
ES.34024.6	chr8	-	5878	2	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	4607	162	2431	-162	intron_retention	FALSE	canonical	3	2132	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117715669	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117709466_117710546
ES.34024.7	chr8	-	2964	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	64	-162	intron_retention	FALSE	canonical	3	2132	junction_1	14.9888847706114	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720212	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117709466_117710546_117710679_117714051_117715943_117720026
ES.34024.8	chr8	-	1429	6	NNC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	76	-162	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1018.57791061853	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720200	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117718340_117718565_117720026
ES.34024.9	chr8	-	1378	6	NNC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	64	-162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1020.52739306694	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720212	117708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117719083_117719245_117720026
ES.34025.1	chr8	+	283	1	Intergenic	novelGene_27727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAAAGAGTCTCATCA	9840	False	NA	NA	False	ATTAAA	-10	NA	117748906	117749189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117748900_117749200
ES.34026.1	chr8	-	1598	9	NNC	ENSMUSG00000034416.19	novel	7389	43	NA	NA	8262	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.1111015720346	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAACATTCTCTACG	5685	False	NA	NA	False	AATAAA	-3	NA	117742572	117722214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117742535
ES.34026.10	chr8	-	1163	4	NIC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	6981	-4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	9.84321537348893	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTGGCATGTTCTT	4404	False	NA	NA	False	TATAAA	-15	NA	117743853	117736065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117736470_117740602_117740737_117741601_117741930_117743556
ES.34026.11	chr8	-	2177	7	NNC	ENSMUSG00000034416.19	novel	1107	2	NA	NA	58	5673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.85861230093008	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACAACAGCACAGA	NA	False	NA	NA	False	NA	NA	NA	117755524	117744615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117744826_117745223_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017_117755235_117755360
ES.34026.12	chr8	-	1323	7	NNC	ENSMUSG00000034416.19	novel	1107	2	NA	NA	-1873	3780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.81881307912987	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTATCGTCGCTGTGA	NA	False	NA	NA	False	AGTAAA	-13	NA	117757455	117746508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117746697_117747778_117747873_117748556_117748762_117750601_117750831_117755017_117755235_117756259_117756475_117757280
ES.34026.3	chr8	-	3091	16	NNC	ENSMUSG00000034416.19	novel	7389	43	NA	NA	-1944	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.61523198888006	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAACATTCTCTACG	NA	False	NA	NA	False	AATAAA	-3	NA	117757526	117722214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017_117755235_117756259_117756475_117757280
ES.34026.4	chr8	-	2778	13	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53596	1702	-10	-1702	internal_fragment	FALSE	canonical	3	6	junction_3	8.16624148553054	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTGTACCTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	117755592	117724119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
ES.34026.5	chr8	-	2698	2	NIC	ENSMUSG00000034416.19	novel	7389	43	NA	NA	10136	-1703	intron_retention	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTACCTATG	7559	False	NA	NA	False	AATAAA	-16	NA	117740698	117724120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_117726723_117740602
ES.34026.6	chr8	-	5003	2	NNC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	14362	6704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	117736472	117729357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117734197_117736308
ES.34026.7	chr8	-	5105	4	NNC	ENSMUSG00000034416.19	novel	1716	8	NA	NA	7108	1889	intron_retention	FALSE	canonical	1	1	junction_3	13.8162545173751	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	4531	False	NA	NA	False	NA	NA	NA	117743726	117734172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117738365_117740602_117740737_117741601_117741930_117743275
ES.34026.9	chr8	-	2417	10	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	53604	13644	-2	0	internal_fragment	FALSE	canonical	3	6	junction_9	8.83735058895475	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGGCATGTTCTTATTT	NA	False	NA	NA	False	TATAAA	-19	NA	117755584	117736061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017
ES.34027.1	chr8	-	2932	2	ISM	ENSMUSG00000034416.19	ENSMUST00000109093.9	7389	43	37084	45951	-16522	-18080	intron_retention	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGTGGAGAAGCATT	NA	False	NA	NA	False	TTTAAA	-6	NA	117772104	117768368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_117769168_117769971
ES.34027.2	chr8	-	2446	12	NNC	ENSMUSG00000034416.19	novel	7386	43	NA	NA	23275	-18113	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.574959574576069	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAATAAGAATAAATC	NA	False	NA	NA	False	NA	NA	NA	117785913	117768401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117769168_117769971_117770104_117771226_117771354_117772801_117772927_117774117_117774301_117776645_117776778_117777768_117777961_117778381_117778528_117781600_117781778_117783052_117783195_117784151_117784273_117785710
ES.34027.3	chr8	-	2252	12	NNC	ENSMUSG00000034416.19	novel	7386	43	NA	NA	23300	-18282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.574959574576069	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGACACACTGCACATG	NA	False	NA	NA	False	NA	NA	NA	117785888	117768570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_117769168_117769971_117770104_117771226_117771354_117772801_117772927_117774117_117774301_117776645_117776778_117777768_117777961_117778381_117778528_117781600_117781778_117783052_117783195_117784151_117784273_117785710
ES.34028.1	chr8	-	175	1	Intergenic	novelGene_27728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGTGAGCGGGGCT	NA	False	NA	NA	False	NA	NA	NA	117874906	117874731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_117874700_117874900
ES.34029.1	chr8	+	3489	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-185	-652	-185	652	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTTCCTAAAAGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	117884688	117932577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.10	chr8	+	1998	9	ISM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	29110	274	29108	-274	3prime_fragment	FALSE	canonical	3	16	junction_5	6.27992834354024	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTAGTGAAGGTTCAGT	NA	False	NA	NA	False	GATAAA	-21	NA	117913983	117931651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.11	chr8	+	3827	1	Intergenic	novelGene_27730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACATAAAGTGGCCAGTA	5946	False	NA	NA	False	AATAGA	-36	NA	117926030	117929857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117926000_117929900
ES.34029.12	chr8	+	6706	1	Genic_Genomic	ENSMUSG00000052557.12	novel	NA	NA	NA	NA	51158	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAATCCCTTTGTGTTT	NA	False	NA	7	True	AATAAA	-20	NA	117936033	117942739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_117936000_117942700
ES.34029.2	chr8	+	5331	1	Genic_Genomic	ENSMUSG00000052557.12	novel	NA	NA	NA	NA	-154	-41875	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGTACATATGTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	117884719	117890050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_117884700_117890000
ES.34029.3	chr8	+	3406	11	NNC	ENSMUSG00000052557.12	novel	13461	11	NA	NA	-153	595	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.8092552934973	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCCTCCCTGCGTGAG	NA	False	NA	NA	False	NA	NA	NA	117884720	117932520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917235_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.4	chr8	+	2346	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	459	-153	-459	multi-exon	FALSE	canonical	3	16	junction_7	6.18465843842649	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACATAGCCGGCGTACGA	NA	False	NA	NA	False	NA	NA	NA	117884720	117931466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.5	chr8	+	2208	11	NNC	ENSMUSG00000052557.12	novel	2652	11	NA	NA	-153	-558	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	10.3966340706981	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGCATTTTCCCAGAA	NA	False	NA	NA	False	NA	NA	NA	117884720	117931367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117885041_117910239_117910355_117913924_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.6	chr8	+	2845	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	-40	-153	40	multi-exon	FALSE	canonical	3	16	junction_7	6.18465843842649	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGCATCTGATCT	NA	False	NA	NA	False	NA	NA	NA	117884720	117931965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.7	chr8	+	11861	11	FSM	ENSMUSG00000052557.12	ENSMUST00000162997.3	13461	11	-155	1755	-153	-1755	multi-exon	FALSE	canonical	3	16	junction_7	6.18465843842649	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	117884720	117940981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.8	chr8	+	4242	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	-1437	-153	1437	multi-exon	FALSE	canonical	3	16	junction_7	6.18465843842649	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTAAGTGCCAAACTAT	NA	False	NA	NA	False	AATAAA	-36	NA	117884720	117933362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ES.34029.9	chr8	+	2187	1	Intergenic	novelGene_27729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117897752	117899939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117897800_117899900
ES.3403.1	chr10	-	163	1	Intergenic	novelGene_2624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	8629	False	NA	NA	False	NA	NA	NA	81455828	81455665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81455700_81455800
ES.34030.1	chr8	-	2294	1	Antisense	novelGene_ENSMUSG00000052557.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	117885247	117882953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_117883000_117885200
ES.34031.1	chr8	+	177	1	Intergenic	novelGene_27731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	117945561	117945738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117945600_117945700
ES.34032.1	chr8	+	2888	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-437	-43	-437	43	multi-exon	TRUE	canonical	3	28	junction_12	7.20052081449669	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCTTGACTAATAGC	NA	False	NA	NA	False	NA	NA	NA	117983365	118186212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.10	chr8	+	9022	1	Intergenic	novelGene_27735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118014130	118023152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118014100_118023200
ES.34032.11	chr8	+	207	1	Intergenic	novelGene_27736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCCTTTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	118032507	118032714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118032500_118032700
ES.34032.12	chr8	+	2151	21	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-5718	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4737744443579	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCGACTCTTGACTAATA	NA	False	NA	NA	False	NA	NA	NA	118070190	118186210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118070231_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.13	chr8	+	2171	19	NNC	ENSMUSG00000034390.17	novel	4693	15	NA	NA	-13028	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.9139144711002	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118137126	118186152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118137422_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.14	chr8	+	3942	1	Intergenic	novelGene_27740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCAAACATCAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	118158357	118162299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118158400_118162300
ES.34032.2	chr8	+	2832	20	NIC	ENSMUSG00000034390.17	novel	2408	21	NA	NA	-432	43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.7718383137605	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCTTGACTAATAGC	NA	False	NA	NA	False	NA	NA	NA	117983370	118186212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117984141_118103813_118103940_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.3	chr8	+	4913	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	-429	-2076	-429	2076	multi-exon	FALSE	canonical	3	28	junction_12	7.20052081449669	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCCTTGCTGTGTGGTT	NA	False	NA	7	True	AATAAA	-20	NA	117983373	118188245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.4	chr8	+	2716	11	FSM	ENSMUSG00000034390.17	ENSMUST00000211913.2	2246	11	-470	0	-417	0	multi-exon	FALSE	canonical	3	33	junction_10	4.56618002273235	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAAGGCATA	NA	False	NA	NA	False	NA	NA	NA	117983385	118172927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054
ES.34032.5	chr8	+	2933	22	NNC	ENSMUSG00000034390.17	novel	2408	21	NA	NA	-381	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9348988477022	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCTTGACTAATAGC	NA	False	NA	NA	False	NA	NA	NA	117983421	118186212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117984141_118082825_118082927_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ES.34032.6	chr8	+	4314	22	NNC	ENSMUSG00000034390.17	novel	2408	21	NA	NA	-357	2076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	11.1994897842969	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGCCTTGCTGTGTGGTT	NA	False	NA	7	True	AATAAA	-20	NA	117983445	118188245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067_118186213_118186739
ES.34032.7	chr8	+	4323	10	ISM	ENSMUSG00000034390.17	ENSMUST00000211913.2	2246	11	-393	6712	-340	-6712	5prime_fragment	FALSE	canonical	3	35	junction_4	4.23681688109725	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGGTGTTTTGCCTGCAT	NA	False	NA	NA	False	NA	NA	NA	117983462	118166215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304
ES.34032.8	chr8	+	5645	10	NIC	ENSMUSG00000034390.17	novel	2246	11	NA	NA	183	0	intron_retention	FALSE	canonical	3	33	junction_9	4.54606056566195	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAAGGCATA	NA	False	NA	NA	False	NA	NA	NA	117984038	118172927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054
ES.34032.9	chr8	+	2372	1	Intergenic	novelGene_27732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117985166	117987538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_117985200_117987500
ES.34033.1	chr8	-	174	1	Intergenic	novelGene_27733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACGGGCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	117991258	117991084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_117991100_117991300
ES.34034.1	chr8	-	131	1	Intergenic	novelGene_27734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAAAAACAATAATC	NA	False	NA	NA	False	NA	NA	NA	118008962	118008831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118008800_118009000
ES.34035.1	chr8	-	162	1	Intergenic	novelGene_27737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	118037744	118037582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118037600_118037700
ES.34036.1	chr8	-	179	1	Intergenic	novelGene_27738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACATTTTAGGCG	NA	False	NA	NA	False	NA	NA	NA	118077133	118076954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118077000_118077100
ES.34037.1	chr8	-	3072	1	Intergenic	novelGene_27739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCCTCTAGAATTCTGT	NA	False	NA	NA	False	NA	NA	NA	118102467	118099395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118099400_118102500
ES.34038.1	chr8	+	179	1	Intergenic	novelGene_27741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACCACC	NA	False	NA	NA	False	NA	NA	NA	118191600	118191779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118191600_118191800
ES.34039.1	chr8	-	156	1	Intergenic	novelGene_27742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAAGAGTTGCC	NA	False	NA	NA	False	NA	NA	NA	118194020	118193864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118193900_118194000
ES.3404.1	chr10	+	4732	23	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-945	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	26.9897439964097	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	1862	False	NA	NA	False	AATAAA	-29	NA	81463428	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464273_81464414_81464475_81464573_81464760_81465382_81465583_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.10	chr10	+	3499	20	NNC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.3294821129279	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGCAAGAGTTGTGTCT	7967	False	NA	NA	False	AATAAA	-31	NA	81469533	81483446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81469590_81470500_81470587_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.11	chr10	+	5588	15	NIC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_2	31.4288961022191	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	7967	False	NA	NA	False	AATAAA	-29	NA	81469533	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81469590_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475771_81475861_81476825_81477809_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.12	chr10	+	5252	17	NNC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	30.0379317488738	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	7967	False	NA	NA	False	AATAAA	-29	NA	81469533	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81469590_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81472261_81473902_81473974_81474104_81474212_81474399_81474583_81475140_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.14	chr10	+	4298	20	NIC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_2	27.4606744756803	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	7967	False	NA	NA	False	AATAAA	-29	NA	81469533	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81469590_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.15	chr10	+	4458	21	NNC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	27.3248513262195	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	7967	False	NA	NA	False	AATAAA	-29	NA	81469533	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81469590_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475771_81475861_81475970_81476084_81476366_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.16	chr10	+	6582	11	NNC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_3	5.4735728733616	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATATGTGATTTGGAAT	7971	False	NA	NA	False	NA	NA	NA	81469537	81481799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81469590_81470500_81470588_81470698_81470820_81470903_81470993_81471521_81471692_81472202_81472261_81473902_81474583_81475140_81476825_81477809_81477883_81478134_81478254_81478350
ES.3404.17	chr10	+	5056	17	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	395	-11	intron_retention	FALSE	canonical	2	3	junction_7	28.9217019511301	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTAAAGAAACCAAGT	9201	False	NA	NA	False	AATAAA	-15	NA	81470767	81483430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81470830_81470903_81470993_81471521_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475547_81475689_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.18	chr10	+	3291	17	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	1854	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.7647022494766	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCAAGTCGCAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	81472226	81483437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475462_81475547_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.19	chr10	+	4652	10	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-2634	2	intron_retention	FALSE	canonical	0	0	junction_5	4.47213595499958	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGATTTGGAATCCCT	NA	False	NA	NA	False	NA	NA	NA	81474131	81481803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81474212_81474394_81474583_81475140_81475547_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350
ES.3404.2	chr10	+	3330	18	NIC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	1	1065	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	4.14278043803741	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCCCTTTGCTATTTC	2808	False	NA	NA	False	NA	NA	NA	81464374	81479922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350
ES.3404.20	chr10	+	3480	9	NIC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-1076	-4	intron_retention	FALSE	canonical	3	10	junction_1	36.1280275547946	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCAAGTCGCAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	81475689	81483437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81475771_81475861_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.21	chr10	+	3868	8	NIC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	-366	0	intron_retention	FALSE	canonical	3	11	junction_4	37.6785545023659	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGTCGCAAGAGTTG	NA	False	NA	NA	False	AATAAA	-26	NA	81476399	81483441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.22	chr10	+	2331	4	FSM	ENSMUSG00000054708.18	ENSMUST00000137978.2	3690	4	2	1357	2	-1357	multi-exon	FALSE	canonical	3	11	junction_3	0.471404520791032	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTAGAAGGGATTGTG	NA	False	NA	NA	False	AAAAAG	-9	NA	81476779	81480444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81476825_81477809_81477883_81478134_81478254_81478350
ES.3404.3	chr10	+	5588	15	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	32.9991496489079	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	2808	False	NA	NA	False	AATAAA	-29	NA	81464374	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470698_81470830_81470917_81470993_81471521_81471550_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81476825_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.4	chr10	+	4690	19	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_3	29.5931778090746	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	2838	False	NA	NA	False	AATAAA	-29	NA	81464404	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475547_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.5	chr10	+	6646	18	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_3	4.933467375591	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGATTTGGAATCCCTT	2845	False	NA	NA	False	NA	NA	NA	81464411	81481804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470500_81470588_81470698_81470820_81470903_81470993_81471204_81471351_81471521_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350
ES.3404.6	chr10	+	4431	23	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.6790303638836	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCGCAAGAGTTGTGT	2845	False	NA	NA	False	AATAAA	-29	NA	81464411	81483444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470500_81470588_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475547_81475689_81475771_81475861_81475970_81476601_81476651_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.7	chr10	+	4834	24	NNC	ENSMUSG00000054708.18	novel	3561	20	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	26.3145147437755	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAAGTCGCAAGAGTT	2846	False	NA	NA	False	AATAAA	-25	NA	81464412	81483440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81464475_81464573_81464760_81465382_81465583_81470500_81470588_81470698_81470820_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475291_81475366_81475462_81475547_81475689_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ES.3404.8	chr10	+	4745	20	NNC	ENSMUSG00000054708.18	novel	4635	18	NA	NA	-115	0	intron_retention	FALSE	non_canonical	0	0	junction_2	29.0340329484568	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAGTCGCAAGAGTTG	7851	False	NA	NA	False	AATAAA	-26	NA	81469417	81483441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81469590_81470500_81470592_81470704_81470820_81470903_81470993_81471204_81471351_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475547_81475689_81475771_81475861_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ES.3404.9	chr10	+	4563	14	NIC	ENSMUSG00000054708.18	novel	3161	15	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_1	4.46153846153846	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGATTTGGAATCCCTT	7966	False	NA	NA	False	NA	NA	NA	81469532	81481804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81469590_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350
ES.34040.1	chr8	+	219	1	Intergenic	novelGene_27743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	118200547	118200766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118200500_118200800
ES.34041.1	chr8	-	183	1	Intergenic	novelGene_27744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	118201054	118200871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118200900_118201100
ES.34042.1	chr8	+	4345	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-47	0	-47	0	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118224982	118361881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.10	chr8	+	4277	33	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	38.1671897707966	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118225038	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304569_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.11	chr8	+	4227	32	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.994324819694	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGTTCTGTACCTGATC	NA	False	NA	8	True	AATAAA	-20	NA	118225038	118361878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293630_118294913_118294987_118300663_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.12	chr8	+	4263	33	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.9527744168658	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTAAGCGTTCTGTACCT	NA	False	NA	4	True	AATAAA	-16	NA	118225051	118361874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293546_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.13	chr8	+	4158	32	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	5840	5	5840	-5	3prime_fragment	FALSE	canonical	3	77	junction_6	32.325928614195	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCGTTCTGTACCTGA	NA	False	NA	6	True	AATAAA	-18	NA	118230869	118361876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.14	chr8	+	2911	2	Intergenic	novelGene_27745	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTTTGGGCAGAATC	NA	False	NA	NA	False	NA	NA	NA	118238274	118241253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118240243_118240310
ES.34042.16	chr8	+	3543	27	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	69872	7	69872	-7	3prime_fragment	FALSE	canonical	3	77	junction_1	32.103106819366	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTAAGCGTTCTGTACCT	NA	False	NA	4	True	AATAAA	-16	NA	118294901	118361874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.17	chr8	+	3258	26	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75072	-12935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	43.7764137407349	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCCTCAACTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	118300101	118348946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118348433_118348540_118348694
ES.34042.18	chr8	+	3591	26	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75361	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.3049615188719	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCGTTCTGTACCTGA	NA	False	NA	6	True	AATAAA	-18	NA	118300390	118361876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118300566_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.19	chr8	+	3534	26	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75374	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.1784430522705	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTAAGCGTTCTGTACCT	NA	False	NA	4	True	AATAAA	-16	NA	118300403	118361874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118300524_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.2	chr8	+	4257	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-35	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	38.7412774245098	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118224994	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.20	chr8	+	3221	25	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75403	-12935	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.075613690818	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCCTCAACTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	118300432	118348946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118300524_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118348694
ES.34042.21	chr8	+	3229	25	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	75417	-12955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1840964035704	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTCTGATCATGGTT	NA	False	NA	NA	False	NA	NA	NA	118300446	118348926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118300566_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118348694
ES.34042.22	chr8	+	3373	24	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81257	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	35.9048311486207	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	NA	False	NA	9	True	AATAAA	-21	NA	118306286	118361879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.23	chr8	+	3457	23	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	81270	4	81270	-4	3prime_fragment	FALSE	canonical	3	97	junction_3	29.2337756091073	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118306299	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.24	chr8	+	3038	23	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81303	-12935	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	42.455324111995	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCCTCAACTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	118306332	118348946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118348694
ES.34042.25	chr8	+	2779	17	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	91330	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	54.5538366547212	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	6946	False	NA	7	True	AATAAA	-19	NA	118316359	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327865_118327977_118330560_118330658_118331929_118331997_118333809_118333972_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.26	chr8	+	2179	15	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	94333	2	94333	-2	3prime_fragment	FALSE	canonical	3	114	junction_1	26.7940939273519	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	9949	False	NA	9	True	AATAAA	-21	NA	118319362	118361879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.27	chr8	+	3485	12	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	101154	4	101154	-4	3prime_fragment	FALSE	canonical	3	117	junction_1	25.4749917882532	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118326183	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.3	chr8	+	5457	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	77	junction_7	32.8234960639564	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	NA	False	NA	9	True	AATAAA	-21	NA	118224996	118361879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.4	chr8	+	4316	33	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	38.3710171996717	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCGTTCTGTACCTGA	NA	False	NA	6	True	AATAAA	-18	NA	118225000	118361876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313299_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.6	chr8	+	4231	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-29	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	38.9691305029251	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAAGCGTTCTGTACCTG	NA	False	NA	5	True	AATAAA	-17	NA	118225000	118361875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.7	chr8	+	4852	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-26	-4	intron_retention	FALSE	canonical	3	77	junction_7	32.2594193263883	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCGTTCTGTACCTGAT	NA	False	NA	7	True	AATAAA	-19	NA	118225003	118361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.8	chr8	+	4270	32	NIC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	-25	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	38.2283788436215	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCGTTCTGTACCTGA	NA	False	NA	6	True	AATAAA	-18	NA	118225004	118361876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ES.34042.9	chr8	+	2757	21	ISM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	-9	36393	-9	-36393	5prime_fragment	FALSE	canonical	3	77	junction_7	13.0892131161503	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTCCTGCTTGCCGAC	NA	False	NA	NA	False	ATTAAA	-16	NA	118225020	118325488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160
ES.34043.1	chr8	-	160	1	Intergenic	novelGene_27746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAACAAATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	118324936	118324776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118324800_118324900
ES.34044.1	chr8	-	170	1	Intergenic	novelGene_27747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118333512	118333342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118333300_118333500
ES.34045.1	chr8	-	2749	4	NNC	ENSMUSG00000034308.14	novel	819	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.05480466765633	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGGTTAAATATTCACT	NA	False	NA	2	True	AATAAA	-19	NA	118400433	118388138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118390572_118391725_118391820_118397947_118398075_118400338
ES.34045.2	chr8	-	2945	5	NNC	ENSMUSG00000034308.14	novel	819	4	NA	NA	-5	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAGGAAAAAT	NA	False	NA	-22	True	AATGAA	-25	NA	118400433	118388162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118390572_118390646_118390859_118391725_118391820_118397947_118398083_118400338
ES.34045.3	chr8	-	2733	4	FSM	ENSMUSG00000034308.14	ENSMUST00000174450.2	819	4	-5	-1909	-5	-22	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAGGAAAAAT	NA	False	NA	-22	True	AATGAA	-25	NA	118400433	118388162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118390572_118391725_118391820_118397947_118398083_118400338
ES.34045.4	chr8	-	2611	3	FSM	ENSMUSG00000034308.14	ENSMUST00000173522.8	2615	3	-18	22	-18	-22	multi-exon	FALSE	canonical	2	4	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAGGAAAAAT	NA	False	NA	-22	True	AATGAA	-25	NA	118400446	118388162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118390572_118391725_118391820_118400338
ES.34046.1	chr8	+	2796	3	NNC	ENSMUSG00000110151.3	novel	3565	8	NA	NA	6243	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAAGTGAGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	118414831	118419938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_118414923_118416673_118416889_118417448
ES.34047.1	chr8	+	1275	5	FSM	ENSMUSG00000031844.9	ENSMUST00000034304.9	1320	5	45	0	45	0	multi-exon	FALSE	canonical	1	1	junction_3	2.69258240356725	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTATTTTGAAATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	118428687	118485766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_118429003_118461232_118461446_118469070_118469257_118479924_118480063_118485343
ES.34048.1	chr8	-	3797	1	Antisense	novelGene_ENSMUSG00000031844.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCGGTTGAGCTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	118470924	118467127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_118467100_118470900
ES.34049.1	chr8	+	182	1	Intergenic	novelGene_27748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAGAATGCTAAAA	NA	False	NA	NA	False	NA	NA	NA	118495165	118495347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_118495200_118495300
ES.3405.1	chr10	-	1873	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	4	235	intron_retention	FALSE	canonical	0	0	junction_7	81.7467467991534	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTTTGTTATTTTGTT	9893	False	NA	NA	False	NA	NA	NA	81463396	81457383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463325
ES.3405.10	chr10	-	3091	6	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	14	-8	intron_retention	FALSE	canonical	3	197	junction_1	21.01999048525	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTACATTTTGTTACA	9903	False	NA	-19	True	AATAAA	-17	NA	81463386	81457628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81461733_81462323
ES.3405.11	chr10	-	1255	9	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-36	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.4718085309874	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTACATTTTGTTAC	9853	False	NA	-20	True	AATAAA	-16	NA	81463436	81457629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81457698_81458129_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ES.3405.12	chr10	-	3074	6	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-10	-9	intron_retention	FALSE	canonical	3	197	junction_1	19.7727084639409	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTACATTTTGTTAC	9879	False	NA	-20	True	AATAAA	-16	NA	81463410	81457629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81461733_81462323_81462452_81463305
ES.3405.13	chr10	-	1370	9	NNC	ENSMUSG00000034748.17	novel	1667	9	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	94.6268989241431	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTACATTTTGTTAC	9903	False	NA	-20	True	AATAAA	-16	NA	81463386	81457629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462261_81462452_81463305
ES.3405.2	chr10	-	1750	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	142	-1	-89	-1	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTACATTTATGTAT	9800	False	NA	-10	True	AATAAA	-26	NA	81463489	81457619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ES.3405.3	chr10	-	1677	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	-36	-1	intron_retention	FALSE	canonical	0	0	junction_7	81.7467467991534	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTACATTTATGTAT	9853	False	NA	-10	True	AATAAA	-26	NA	81463436	81457619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463325
ES.3405.5	chr10	-	3813	3	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	1514	-1	intron_retention	FALSE	canonical	3	197	junction_1	24.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	2880	False	NA	-12	True	AATAAA	-24	NA	81461577	81457621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81458514_81458582_81459907_81459980
ES.3405.6	chr10	-	1345	9	NIC	ENSMUSG00000034748.17	novel	1667	9	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	72.0017360901805	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	9874	False	NA	-12	True	AATAAA	-24	NA	81463415	81457621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ES.3405.7	chr10	-	1669	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	51	-2	intron_retention	FALSE	canonical	1	2	junction_6	79.6005332768517	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGTTACATTTATG	9940	False	NA	-13	True	AATAAA	-23	NA	81463349	81457622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462261_81462452_81463305
ES.3405.8	chr10	-	1645	8	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	423	-2	intron_retention	FALSE	canonical	2	5	junction_7	80.0400409998977	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTGTTACATTTATG	1789	False	NA	-13	True	AATAAA	-23	NA	81462668	81457622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462586
ES.3405.9	chr10	-	1671	9	NNC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	18	-6	intron_retention	FALSE	canonical	0	0	junction_8	94.6043570613954	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACATTTTGTTACATT	9907	False	NA	-17	True	AATAAA	-19	NA	81463382	81457626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725_81462761_81463305
ES.34050.1	chr8	-	3378	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	4	-2314	4	2314	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTGTCTCCTTAAGGAT	NA	False	NA	NA	False	NA	NA	NA	118528678	118516069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ES.34050.10	chr8	-	4699	2	NIC	ENSMUSG00000031843.3	novel	887	3	NA	NA	4	-572	intron_retention	FALSE	canonical	3	797	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCAATTGAATTTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	118528678	118521284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_118525896_118528590
ES.34050.11	chr8	-	508	3	NNC	ENSMUSG00000031843.3	novel	887	3	NA	NA	-22	-580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	349	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTCCAATTG	NA	False	NA	NA	False	ATTAAA	-20	NA	118528704	118521292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118521411_118525782_118525896_118528427
ES.34050.12	chr8	-	316	3	FSM	ENSMUSG00000031843.3	ENSMUST00000211818.2	887	3	-11	582	5	-582	multi-exon	FALSE	canonical	3	698	junction_1	49.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAATTTTTCCAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	118528677	118521294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118521411_118525782_118525896_118528590
ES.34050.2	chr8	-	5531	3	FSM	ENSMUSG00000031843.3	ENSMUST00000211818.2	887	3	-3	-4641	-3	2312	multi-exon	FALSE	canonical	3	698	junction_1	49.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGATTGTCTCCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	118528669	118516071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118521411_118525782_118525896_118528590
ES.34050.3	chr8	-	3235	3	NNC	ENSMUSG00000031843.3	novel	887	3	NA	NA	-1	10	intron_retention	FALSE	canonical	3	37	junction_2	330.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTAGTCTTCCTCAG	NA	False	NA	-2	True	AATAAA	-32	NA	118528667	118518373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118521411_118525782_118525896_118528582
ES.34050.4	chr8	-	1165	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	-89	-8	-89	8	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTTAGTCTTCCTC	NA	False	NA	-4	True	AATAAA	-30	NA	118528771	118518375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ES.34050.5	chr8	-	1092	5	NNC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	332.915154356181	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTAATTTTAGTCTTCC	NA	False	NA	-6	True	AATAAA	-28	NA	118528674	118518377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118519058_118519417_118519534_118521319_118521411_118525782_118525896_118528582
ES.34050.7	chr8	-	1082	5	NNC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	318.93132097679	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAAGTAATTTTAGTC	NA	False	NA	-10	True	AATAAA	-24	NA	118528668	118518381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_118519058_118519417_118519516_118521319_118521411_118525756_118525896_118528590
ES.34050.8	chr8	-	2867	4	NIC	ENSMUSG00000031843.3	novel	1068	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	669	junction_1	54.7986212316413	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	False	NA	-12	True	AATAAA	-22	NA	118528677	118518383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_118519058_118519417_118521411_118525782_118525896_118528590
ES.34050.9	chr8	-	636	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	5	427	5	-427	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTGCTGTTCTTGAGA	NA	False	NA	NA	False	AAGAAA	-13	NA	118528677	118518810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ES.34051.1	chr8	-	201	1	Intergenic	novelGene_27749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAAAGCCTGTGAAACC	NA	False	NA	NA	False	NA	NA	NA	118532701	118532500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118532500_118532700
ES.34052.1	chr8	-	2540	1	Intergenic	novelGene_27750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGTGGTGGAGGTGAAT	NA	False	NA	NA	False	NA	NA	NA	118574726	118572186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118572200_118574700
ES.34053.1	chr8	-	3333	2	Intergenic	novelGene_27751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAAGTGCGCAAGTTA	NA	False	NA	NA	False	NA	NA	NA	118602671	118598974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_118602106_118602469
ES.34054.1	chr8	+	178	1	Intergenic	novelGene_27752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119906937	119907115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_119906900_119907100
ES.34055.1	chr8	-	4497	1	Intergenic	novelGene_27753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTATGTGTGTGT	3735	False	NA	NA	False	NA	NA	NA	120039029	120034532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120034500_120039000
ES.34056.1	chr8	+	1237	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	-24	-5	-24	5	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGGTGTGGTCCTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	120071202	120075666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ES.34056.10	chr8	+	5458	3	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	-8	3660	intron_retention	FALSE	canonical	3	1709	junction_2	151	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	120071246	120079321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120071360_120071674_120072473_120074774
ES.34056.11	chr8	+	1837	1	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	-8	803	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGATTTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	120071246	120073083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120071200_120073100
ES.34056.16	chr8	+	2813	3	ISM	ENSMUSG00000031839.8	ENSMUST00000212468.2	638	5	-3	87	-3	-87	intron_retention	FALSE	canonical	0	0	junction_2	1005.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATTGTCAAACGTTTT	NA	False	NA	22	True	ATTAAA	-25	NA	120071257	120074995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120071360_120071674_120071742_120072351
ES.34056.2	chr8	+	574	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	-21	655	-21	-76	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTTTAGTGATTTTTT	NA	False	NA	33	True	ATTAAA	-36	NA	120071205	120075006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ES.34056.3	chr8	+	1143	3	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	9	-87	intron_retention	FALSE	canonical	3	1709	junction_2	151	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATTGTCAAACGTTTT	NA	False	NA	22	True	ATTAAA	-25	NA	120071235	120074995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120071360_120071674_120072473_120074774
ES.34056.4	chr8	+	1252	5	NNC	ENSMUSG00000031839.8	novel	638	5	NA	NA	-12	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	867.37978273649	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGGTGTGGTCCTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	120071242	120075666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120071360_120071674_120071742_120072351_120072473_120072573_120072629_120074774
ES.34056.5	chr8	+	570	5	FSM	ENSMUSG00000031839.8	ENSMUST00000212468.2	638	5	-17	85	-11	-85	multi-exon	FALSE	canonical	0	0	junction_2	859.671594273069	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGTCAAACGTTTTAG	NA	False	NA	24	True	ATTAAA	-27	NA	120071243	120074997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120073563_120073607_120074774
ES.34056.6	chr8	+	1797	3	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	1709	junction_2	151	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAGAATGGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	120071244	120075658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120071360_120071674_120072473_120074774
ES.34056.8	chr8	+	7415	3	NNC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	-8	3659	intron_retention	FALSE	non_canonical	0	0	junction_2	1005.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	120071246	120079320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120071360_120071674_120076691_120077034
ES.34057.1	chr8	+	2239	4	NNC	ENSMUSG00000110470.2	novel	1783	4	NA	NA	655	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAAGACTGGATCTGAA	4518	False	NA	NA	False	AATAAA	-14	NA	120106089	120113131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120106433_120106571_120106662_120111119_120111419_120111624
ES.34057.2	chr8	+	3413	3	NNC	ENSMUSG00000110470.2	novel	1783	4	NA	NA	664	1031	intron_retention	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGAAGGTGTGGTCTTTT	4527	False	NA	NA	False	AATAAA	-9	NA	120106098	120114307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120106226_120108884_120108983_120111119
ES.34057.3	chr8	+	1976	3	NNC	ENSMUSG00000110470.2	novel	1783	4	NA	NA	868	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTAAGACTGGATCTGAA	4731	False	NA	NA	False	AATAAA	-14	NA	120106302	120113131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120106473_120111119_120111419_120111624
ES.34058.1	chr8	-	178	1	Intergenic	novelGene_27754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAGAAAAAGT	8156	False	NA	NA	False	NA	NA	NA	120107995	120107817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120107800_120108000
ES.34059.1	chr8	+	2146	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	-19	1	-19	-1	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCACTGTGTACTTTTCT	1450	False	NA	18	True	ATTAAA	-31	NA	120121597	120137840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
ES.34059.2	chr8	+	2055	6	NNC	ENSMUSG00000074064.7	novel	2128	5	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	31.9749902267381	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTTTAAGTCTACTTC	1472	False	NA	3	True	ATTAAA	-16	NA	120121619	120137825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120121940_120121993_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
ES.3406.1	chr10	-	6333	1	Antisense	novelGene_ENSMUSG00000054708.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAAGATATCCCCT	7633	False	NA	NA	False	AATAAA	-16	NA	81479574	81473241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_81473200_81479600
ES.34060.1	chr8	+	1975	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	29	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCTGAGGAGTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	120163885	120172994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
ES.34061.1	chr8	+	4841	12	NIC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	-48	0	intron_retention	FALSE	canonical	3	44	junction_2	4.70975776254132	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120173409	120199379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ES.34061.2	chr8	+	2207	13	NNC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.8559049638367	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120173442	120199379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120174004_120176820_120177062_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ES.34061.3	chr8	+	1928	13	FSM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	47	1	47	-1	multi-exon	FALSE	canonical	3	44	junction_3	4.71625439894367	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCGTGTCTCTGTCCCTT	NA	False	NA	10	True	AATAAA	-18	NA	120173504	120199378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120174004_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ES.34061.4	chr8	+	1852	14	NNC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	174	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5311703136789	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGTGTCGTGTCTCTG	NA	False	NA	4	True	AATAAA	-12	NA	120173631	120199372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120174004_120176359_120176413_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197729_120198478_120198571_120198880
ES.34061.6	chr8	+	3880	11	NNC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	-1880	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.677962871475	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGTGTCGTGTCTCTG	NA	False	NA	4	True	AATAAA	-12	NA	120177290	120199372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120179878_120180939_120180966_120181097_120181200_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ES.34061.7	chr8	+	2001	11	ISM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	4767	0	-946	0	3prime_fragment	FALSE	canonical	3	44	junction_1	4.65295604965274	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120178224	120199379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ES.34061.8	chr8	+	1447	4	NIC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	15172	0	intron_retention	FALSE	canonical	3	56	junction_2	2.35702260395516	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120194342	120199379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120195121_120197646_120197725_120198478_120198571_120198880
ES.34062.1	chr8	+	94	1	Intergenic	novelGene_27755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	120208374	120208468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120208400_120208500
ES.34063.1	chr8	+	2047	1	Intergenic	novelGene_27756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCACAAAGAAGGAGGGAAT	3337	False	NA	NA	False	NA	NA	NA	120231832	120233879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120231800_120233900
ES.34064.1	chr8	-	4342	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-138	-9	-138	9	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTCGTGCCCCAGCC	8003	False	NA	2	True	AATAAA	-23	NA	120285612	120234885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.10	chr8	-	4107	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-10	5	combination_of_known_splicesites	FALSE	canonical	2	13	junction_14	116.293787013577	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8131	False	NA	-2	True	AATAAA	-19	NA	120285484	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.11	chr8	-	4417	24	FSM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	-76	-5	-68	5	multi-exon	FALSE	canonical	3	10	junction_23	140.895341173728	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8073	False	NA	-2	True	AATAAA	-19	NA	120285542	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ES.34064.12	chr8	-	4171	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-14	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	116.133908531246	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8127	False	NA	-2	True	AATAAA	-19	NA	120285488	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257907_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.13	chr8	-	6946	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-35	5	intron_retention	FALSE	canonical	3	33	junction_21	110.885448848981	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8400	False	NA	-2	True	AATAAA	-19	NA	120285215	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
ES.34064.15	chr8	-	7012	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-63	5	intron_retention	FALSE	canonical	3	394	junction_21	52.2288701321735	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8078	False	NA	-2	True	AATAAA	-19	NA	120285537	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.16	chr8	-	4179	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	115.743991151175	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8131	False	NA	-2	True	AATAAA	-19	NA	120285484	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274169_120274625_120285384
ES.34064.17	chr8	-	4325	24	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	148.644143125265	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8145	False	NA	-2	True	AATAAA	-19	NA	120285470	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236439_120236569_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.18	chr8	-	6295	20	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-10	5	intron_retention	FALSE	non_canonical	0	0	junction_14	161.984592817494	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8131	False	NA	-2	True	AATAAA	-19	NA	120285484	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120262684_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120285384
ES.34064.19	chr8	-	4368	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-68	5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_23	138.535194084391	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8073	False	NA	-2	True	AATAAA	-19	NA	120285542	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
ES.34064.2	chr8	-	4199	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-26	5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	111.712413021743	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8115	False	NA	-2	True	AATAAA	-19	NA	120285500	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.21	chr8	-	4429	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	144.861290165557	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8141	False	NA	-2	True	AATAAA	-19	NA	120285474	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
ES.34064.22	chr8	-	3975	21	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-68	5	combination_of_known_splicesites	FALSE	canonical	2	33	junction_20	143.251317620467	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8367	False	NA	-2	True	AATAAA	-19	NA	120285248	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
ES.34064.23	chr8	-	4495	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-22	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	169.742170767497	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8119	False	NA	-2	True	AATAAA	-19	NA	120285496	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265824_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ES.34064.25	chr8	-	8986	1	Genic_Genomic	ENSMUSG00000031835.17	novel	NA	NA	NA	NA	-1296	2	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGCATGTGTCGTGC	NA	False	NA	-5	True	AATAAA	-16	NA	120243878	120234892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_120234900_120243900
ES.34064.26	chr8	-	3445	21	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_20	119.565086877399	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8147	False	NA	-7	True	AATAAA	-14	NA	120285468	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120285384
ES.34064.28	chr8	-	4156	24	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	113.598686725283	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8131	False	NA	-7	True	AATAAA	-14	NA	120285484	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272789_120272837_120272981_120274138_120274625_120285384
ES.34064.29	chr8	-	3563	22	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	183.290112406868	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8075	False	NA	-7	True	AATAAA	-14	NA	120285540	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264683_120264730_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120285384
ES.34064.3	chr8	-	4183	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	115.730352383504	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8121	False	NA	-2	True	AATAAA	-19	NA	120285494	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248530_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.30	chr8	-	4346	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_23	167.218894835991	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8112	False	NA	-7	True	AATAAA	-14	NA	120285503	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ES.34064.31	chr8	-	4295	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	115.881208767662	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8131	False	NA	-7	True	AATAAA	-14	NA	120285484	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265492_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.32	chr8	-	2046	12	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	-73	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	158.931868556861	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	False	NA	-7	True	AATAAA	-14	NA	120252209	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235180_120235236_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106
ES.34064.34	chr8	-	7286	14	NIC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	2543	0	intron_retention	FALSE	canonical	3	437	junction_4	46.3777900323422	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	False	NA	-7	True	AATAAA	-14	NA	120263162	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013
ES.34064.35	chr8	-	4109	12	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	-5350	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	152.935193966984	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	False	NA	-7	True	AATAAA	-14	NA	120257486	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249121_120249334_120251165_120251339_120252106_120252296_120255662
ES.34064.36	chr8	-	4285	24	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	148.769534149688	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8122	False	NA	-7	True	AATAAA	-14	NA	120285493	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120263245_120263317_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.38	chr8	-	3721	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	117.317291729632	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8129	False	NA	-7	True	AATAAA	-14	NA	120285486	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120285384
ES.34064.4	chr8	-	5421	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-63	5	intron_retention	FALSE	canonical	3	394	junction_21	51.6604999611485	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8078	False	NA	-2	True	AATAAA	-19	NA	120285537	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120274625_120285384
ES.34064.40	chr8	-	4312	24	NIC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_23	141.739197119216	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8429	False	NA	-7	True	AATAAA	-14	NA	120285186	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285128
ES.34064.41	chr8	-	2168	13	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	-3594	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	152.963571371313	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	False	NA	-7	True	AATAAA	-14	NA	120255730	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251202_120251290_120251339_120252106_120252296_120255662
ES.34064.42	chr8	-	3500	21	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-7183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	119.459313157242	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	NA	False	NA	-7	True	AATAAA	-14	NA	120272888	120234894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247050_120247724_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722
ES.34064.45	chr8	-	4293	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	165.318778959768	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8115	False	NA	-8	True	AATAAA	-13	NA	120285500	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
ES.34064.47	chr8	-	3677	22	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	117.317291729632	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8428	False	NA	-8	True	AATAAA	-13	NA	120285187	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120285128
ES.34064.48	chr8	-	4177	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.017097628534	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8156	False	NA	-8	True	AATAAA	-13	NA	120285459	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268428_120268809_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.5	chr8	-	11758	19	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-8533	5	intron_retention	FALSE	non_canonical	0	0	junction_5	125.458812286132	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	NA	False	NA	-2	True	AATAAA	-19	NA	120274238	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120240740_120242316_120242449_120244877_120245019_120247010_120247083_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138
ES.34064.50	chr8	-	5499	23	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	10	junction_22	170.919051934094	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8116	False	NA	-8	True	AATAAA	-13	NA	120285499	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120274625_120276296_120276446_120285384
ES.34064.51	chr8	-	3961	21	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	2	83	junction_13	105.705948271609	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8119	False	NA	-8	True	AATAAA	-13	NA	120285496	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.53	chr8	-	4193	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.730352383504	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8116	False	NA	-8	True	AATAAA	-13	NA	120285499	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248519_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.55	chr8	-	4327	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.589863435016	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	8147	False	NA	-8	True	AATAAA	-13	NA	120285468	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235854_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.56	chr8	-	7456	11	NIC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	-5708	-1	intron_retention	FALSE	canonical	3	437	junction_3	47.9349559298848	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGCTGGCATGTGTCG	NA	False	NA	-8	True	AATAAA	-13	NA	120257844	120234895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787
ES.34064.58	chr8	-	4310	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.539169058709	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8148	False	NA	-9	True	AATAAA	-12	NA	120285467	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265824_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.59	chr8	-	7201	12	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	6575	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	159.677412407196	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	NA	False	NA	-9	True	AATAAA	-12	NA	120259130	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120240777_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787
ES.34064.6	chr8	-	3902	17	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	1803	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	177.533447552848	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	NA	False	NA	-2	True	AATAAA	-19	NA	120263902	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120262653_120262827_120262929
ES.34064.60	chr8	-	4181	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	115.801527630912	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8157	False	NA	-9	True	AATAAA	-12	NA	120285458	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237122_120240606_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.62	chr8	-	4454	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-69	-2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	115.497593978732	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8072	False	NA	-9	True	AATAAA	-12	NA	120285543	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244685_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.63	chr8	-	3533	11	ISM	ENSMUSG00000031835.17	ENSMUST00000212601.2	6789	22	31803	2	-1505	-2	3prime_fragment	FALSE	canonical	3	437	junction_5	48.8225357801088	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	NA	False	NA	-9	True	AATAAA	-12	NA	120253641	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106
ES.34064.64	chr8	-	7054	23	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	27	junction_22	141.431173577483	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8129	False	NA	-9	True	AATAAA	-12	NA	120285486	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
ES.34064.65	chr8	-	4031	22	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_21	165.585705452917	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8148	False	NA	-9	True	AATAAA	-12	NA	120285467	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
ES.34064.66	chr8	-	4887	13	NIC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	3901	-2	intron_retention	FALSE	canonical	3	437	junction_5	45.8384845590107	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	NA	False	NA	-9	True	AATAAA	-12	NA	120261804	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059
ES.34064.67	chr8	-	4430	24	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	175.167432731096	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8105	False	NA	-9	True	AATAAA	-12	NA	120285510	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120263891_120264003_120264865_120264934_120265492_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.68	chr8	-	4289	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	142.304832688237	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8401	False	NA	-9	True	AATAAA	-12	NA	120285214	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285128
ES.34064.69	chr8	-	4435	25	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	187.352715300728	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8119	False	NA	-9	True	AATAAA	-12	NA	120285496	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120263245_120263317_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ES.34064.7	chr8	-	4399	23	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	27	5	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	108.399513584954	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8198	False	NA	-2	True	AATAAA	-19	NA	120285417	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
ES.34064.70	chr8	-	4297	24	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	149.200731308739	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAAGCTGGCATGTGTC	8119	False	NA	-9	True	AATAAA	-12	NA	120285496	120234896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120283906_120283989_120285384
ES.34064.72	chr8	-	3915	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	152.08479583432	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAAGCTGGCATGTGT	8153	False	NA	-10	True	AATAAA	-11	NA	120285462	120234897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252273_120255699_120255808_120257787_120257825_120260139_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.73	chr8	-	5224	21	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-15	-3	intron_retention	FALSE	canonical	2	13	junction_14	153.14339685406	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAAGCTGGCATGTGT	8420	False	NA	-10	True	AATAAA	-11	NA	120285195	120234897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120274625_120285128
ES.34064.74	chr8	-	4178	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	114.676521334816	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTACAAAGCTGGCATGTG	8141	False	NA	-11	True	AATAAA	-10	NA	120285474	120234898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274612_120285384
ES.34064.76	chr8	-	3734	22	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-8707	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	117.317291729632	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTATCAACTGCCATCAT	NA	False	NA	1	True	NA	NA	NA	120274412	120234985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272913_120274138
ES.34064.77	chr8	-	4034	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	-19	180	-19	-180	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGACCTCCTCTTTGAT	8122	False	NA	-88	True	NA	NA	NA	120285493	120235074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.78	chr8	-	3475	19	ISM	ENSMUSG00000031835.17	ENSMUST00000212685.2	6624	22	49	9444	19	3816	5prime_fragment	FALSE	canonical	3	394	junction_18	55.6926087256349	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCAGCTCCTGCCTTT	8190	False	NA	NA	False	NA	NA	NA	120285425	120244338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.79	chr8	-	3397	18	NIC	ENSMUSG00000031835.17	novel	6624	22	NA	NA	-19	3773	combination_of_known_splicesites	FALSE	canonical	2	13	junction_10	127.75847671956	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAATAAATCTTT	8122	False	NA	NA	False	NA	NA	NA	120285493	120244381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.8	chr8	-	9652	21	NNC	ENSMUSG00000031835.17	novel	6789	22	NA	NA	-1	5	intron_retention	FALSE	canonical	0	0	junction_8	154.964383004612	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8148	False	NA	-2	True	AATAAA	-19	NA	120285467	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249121_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257940_120260059_120260212_120262013_120264934_120265582_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.80	chr8	-	3187	19	ISM	ENSMUSG00000031835.17	ENSMUST00000212685.2	6624	22	6	9775	-2	3485	5prime_fragment	FALSE	canonical	3	394	junction_18	55.6926087256349	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTCTGCATATACCTG	8147	False	NA	NA	False	AATAAA	-20	NA	120285468	120244669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.81	chr8	-	2906	15	ISM	ENSMUSG00000031835.17	ENSMUST00000212685.2	6624	22	-16	13917	-16	-657	5prime_fragment	FALSE	canonical	3	394	junction_14	46.2579833154037	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTAGCTGGTCCTTGTGGC	8125	False	NA	NA	False	AGTAAA	-42	NA	120285490	120248811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ES.34064.9	chr8	-	4167	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	-15	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	148.086807242708	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCATGTGTCGTGCCCC	8420	False	NA	-2	True	AATAAA	-19	NA	120285195	120234889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260202_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
ES.34065.1	chr8	-	5360	5	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	4	2272	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	55.8496866598193	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGGCTACTGTCTCA	NA	False	NA	NA	False	AATAAA	-20	NA	120301910	120286455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301830
ES.34065.10	chr8	-	4423	4	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	107	junction_3	19.6015872373189	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	False	NA	-10	True	AATAAA	-19	NA	120301913	120288727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120290877_120292382_120292611_120292767_120294731_120301830
ES.34065.11	chr8	-	2142	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	-4	1003	-4	-192	multi-exon	FALSE	canonical	3	107	junction_4	18.9274932307477	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGGTTGAAATATGGG	NA	False	NA	NA	False	GATAAA	-19	NA	120301926	120289730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
ES.34065.12	chr8	-	1533	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	69	1539	61	-728	multi-exon	FALSE	canonical	3	107	junction_4	18.9274932307477	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGACAACAGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	120301853	120290266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
ES.34065.13	chr8	-	3002	1	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	14	-4303	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120301900	120298898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120298900_120301900
ES.34065.2	chr8	-	3207	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	-55	-11	-55	11	multi-exon	FALSE	canonical	3	107	junction_4	18.9274932307477	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301977	120288716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
ES.34065.3	chr8	-	6053	2	NIC	ENSMUSG00000034189.6	novel	295	3	NA	NA	45	11	intron_retention	TRUE	canonical	3	107	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGGGTCTTTTTCTTTC	NA	False	NA	1	True	AATAAA	-30	NA	120301869	120288716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120294731_120301830
ES.34065.4	chr8	-	3126	5	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	-16	10	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	55.8496866598193	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGGTCTTTTTCTTT	NA	False	NA	0	True	AATAAA	-29	NA	120301938	120288717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301830
ES.34065.5	chr8	-	3192	5	NNC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	-9	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.5944510660836	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGGTCTTTTTCTTT	NA	False	NA	0	True	AATAAA	-29	NA	120301931	120288717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294472_120294731_120301830
ES.34065.6	chr8	-	3358	6	NNC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	3	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.7572136381065	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGAGGGTCTTTTTCTTT	NA	False	NA	0	True	AATAAA	-29	NA	120301911	120288717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301187_120301406_120301830
ES.34065.7	chr8	-	3750	5	NIC	ENSMUSG00000034189.6	novel	2215	5	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_4	60.8989942445686	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCGCCACCAGAGGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	120301928	120288726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301187
ES.34065.8	chr8	-	3338	6	NNC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	191	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.7572136381065	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	False	NA	-10	True	AATAAA	-19	NA	120301723	120288727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120296716_120296773_120301490
ES.34065.9	chr8	-	3190	6	NNC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	67.0325294166944	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	False	NA	-10	True	AATAAA	-19	NA	120301915	120288727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120296716_120296773_120301830
ES.34066.1	chr8	+	2182	12	NNC	ENSMUSG00000031831.7	novel	2821	12	NA	NA	33	-610	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.65144564768954	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACGCACACAGTCAGCAC	NA	False	NA	NA	False	CATAAA	-7	NA	120302006	120324583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120302207_120304069_120304210_120305966_120306059_120309247_120309470_120309585_120309753_120314916_120315039_120317317_120317476_120318439_120318698_120321571_120321664_120322682_120322743_120323425_120323823_120324309
ES.34066.2	chr8	+	167	1	Intergenic	novelGene_27757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGAGAGAGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	120303072	120303239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120303100_120303200
ES.34067.1	chr8	-	157	1	Intergenic	novelGene_27758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	120310138	120309981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120310000_120310100
ES.34068.1	chr8	-	2997	1	Intergenic	novelGene_27759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTTCTGTTCTATTTGTG	NA	False	NA	0	True	NA	NA	NA	120313720	120310723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120310700_120313700
ES.34069.1	chr8	-	177	1	Intergenic	novelGene_27760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTGTAATGGGAGC	NA	False	NA	NA	False	NA	NA	NA	120315467	120315290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120315300_120315500
ES.3407.1	chr10	+	1961	4	NNC	ENSMUSG00000096856.8	novel	4735	4	NA	NA	-17	126143	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	18.263503375737	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATACTGCCATCT	NA	False	NA	NA	False	AATAAA	-16	NA	81484875	81629338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81485001_81497831_81497959_81498158_81498220_81627690
ES.3407.10	chr10	+	2577	5	NNC	ENSMUSG00000096795.5	novel	771	5	NA	NA	-41	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.6584641647896	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATTTATACTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	81540617	81557803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81540735_81554291_81554451_81554752_81554880_81555078_81555140_81555690
ES.3407.11	chr10	+	5048	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	-32	-2632	-32	-2078	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGTCAGGGTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	81540626	81560442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ES.3407.12	chr10	+	2543	5	FSM	ENSMUSG00000096795.5	ENSMUST00000201819.4	771	5	-71	-1701	-18	-7	multi-exon	FALSE	canonical	0	0	junction_1	15.6584641647896	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATTTATACTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	81540640	81557803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81540735_81554302_81554451_81554752_81554880_81555078_81555140_81555690
ES.3407.13	chr10	+	4699	1	NIC	ENSMUSG00000096795.5	novel	2384	4	NA	NA	0	-10745	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGTCTCATAGCCTT	NA	False	NA	NA	False	NA	NA	NA	81540658	81545357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81540700_81545400
ES.3407.14	chr10	+	2359	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	18	7	18	-7	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATTTATACTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	81540676	81557803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ES.3407.15	chr10	+	193	1	Intergenic	novelGene_2628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATATGTGTAGTATAT	NA	False	NA	NA	False	NA	NA	NA	81553634	81553827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81553600_81553800
ES.3407.16	chr10	+	4536	1	FSM	ENSMUSG00000112621.2	ENSMUST00000219616.2	950	1	-3383	-203	-3383	203	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAGAAAGAAA	757	False	NA	NA	False	AATAAA	-14	NA	81560373	81564909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81560400_81564900
ES.3407.2	chr10	+	2153	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	-13	2595	-13	535	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAATGATATACTGC	NA	False	NA	NA	False	AATAAA	-11	NA	81484879	81500600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
ES.3407.3	chr10	+	3209	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	-11	1537	-11	-1537	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTGTTTAATCCC	NA	False	NA	NA	False	NA	NA	NA	81484881	81501658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
ES.3407.4	chr10	+	1875	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	-6	2866	-6	264	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTGTATACTAATTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	81484886	81500329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
ES.3407.5	chr10	+	1882	4	NNC	ENSMUSG00000096856.8	novel	1497	3	NA	NA	-5643	266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.757863302587	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTATACTAATTGTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	81492188	81500331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81492308_81497831_81497959_81498158_81498220_81498756
ES.3407.6	chr10	+	1884	4	Antisense	novelGene_ENSMUSG00000112001.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.8133634311129	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAATGTGATACTGCCT	NA	False	NA	NA	False	NA	NA	NA	81523202	81534653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81523350_81532207_81532335_81532534_81532596_81533104
ES.3407.7	chr10	+	1942	4	Intergenic	novelGene_2627	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATACTGCCATCT	NA	False	NA	NA	False	AATAAA	-16	NA	81523243	81629338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81523350_81532207_81532335_81627093_81627155_81627690
ES.3407.8	chr10	+	546	4	Antisense	novelGene_ENSMUSG00000112001.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	11.8133634311129	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAACCCTATGGGTGCA	NA	False	NA	NA	False	NA	NA	NA	81523273	81533386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81523350_81532207_81532335_81532534_81532596_81533104
ES.3407.9	chr10	+	6867	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	-69	-4414	-69	-296	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGTTCATGTTGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	81540589	81562224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ES.34070.1	chr8	-	3243	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	-6	-1	-6	1	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTAAAGCCCACT	1058	False	NA	-1	True	NA	NA	NA	120331967	120324712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.10	chr8	-	3101	1	FSM	ENSMUSG00000081378.2	ENSMUST00000117927.2	456	1	-2579	-66	-2579	66	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGGCGTGGCTACATCC	1082	False	NA	NA	False	AATAAA	-41	NA	120331943	120328842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120328800_120331900
ES.34070.11	chr8	-	2225	3	NIC	ENSMUSG00000031832.16	novel	3309	15	NA	NA	5	-2476	intron_retention	FALSE	canonical	3	55	junction_1	7.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGGCGTGGCTACATCC	1069	False	NA	NA	False	AATAAA	-41	NA	120331956	120328842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120329987_120330119_120331118_120331873
ES.34070.12	chr8	-	1542	3	NIC	ENSMUSG00000031832.16	novel	3474	14	NA	NA	2	-2505	intron_retention	FALSE	canonical	3	64	junction_1	3	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1082	False	NA	NA	False	AATAAA	-12	NA	120331943	120328871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120330205_120330978_120331118_120331873
ES.34070.2	chr8	-	4303	14	NIC	ENSMUSG00000031832.16	novel	3309	15	NA	NA	-16	1	intron_retention	FALSE	canonical	3	42	junction_1	8.13495634855525	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTAAAGCCCACT	1048	False	NA	-1	True	NA	NA	NA	120331977	120324712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.3	chr8	-	3300	14	NIC	ENSMUSG00000031832.16	novel	3236	15	NA	NA	-3	0	intron_retention	FALSE	canonical	1	17	junction_8	12.3996564182215	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGTGTAAAGCCCAC	1077	False	NA	-2	True	NA	NA	NA	120331948	120324713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.4	chr8	-	3392	13	NIC	ENSMUSG00000031832.16	novel	3236	15	NA	NA	2	-1	intron_retention	FALSE	canonical	1	17	junction_7	12.9622850351832	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTGTGTAAAGCCCA	1082	False	NA	-3	True	NA	NA	NA	120331943	120324714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.5	chr8	-	4379	13	NIC	ENSMUSG00000031832.16	novel	3474	14	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	43	junction_6	7.76566517148116	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTGTGTAAAGCCCA	1047	False	NA	-3	True	NA	NA	NA	120331978	120324714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.6	chr8	-	3312	15	FSM	ENSMUSG00000031832.16	ENSMUST00000147964.8	3309	15	-5	2	-5	-2	multi-exon	FALSE	canonical	2	19	junction_9	11.7969643276115	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGTGTGTAAAGCCC	1059	False	NA	-4	True	NA	NA	NA	120331966	120324715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329496_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.7	chr8	-	4371	13	NIC	ENSMUSG00000031832.16	novel	3309	15	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	42	junction_1	8.2192186706253	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTGTGTAAAGCC	1046	False	NA	-5	True	AATAAA	-45	NA	120331979	120324716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120329644_120329728_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.8	chr8	-	3364	14	FSM	ENSMUSG00000031832.16	ENSMUST00000212929.2	3474	14	2	108	2	-4	multi-exon	FALSE	canonical	2	19	junction_8	11.9782840983518	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTGTGTAAAGC	1082	False	NA	-6	True	AATAAA	-44	NA	120331943	120324717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329496_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34070.9	chr8	-	1387	5	NIC	ENSMUSG00000031832.16	novel	3309	15	NA	NA	-1	-2476	intron_retention	FALSE	canonical	3	55	junction_2	5.49431524395898	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTAGGCGTGGCTACATCC	1063	False	NA	NA	False	AATAAA	-41	NA	120331962	120328842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ES.34071.1	chr8	+	178	1	Intergenic	novelGene_27761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACTTCCTCACAAGT	NA	False	NA	NA	False	NA	NA	NA	120333076	120333254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120333100_120333300
ES.34072.1	chr8	+	2279	8	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-40	4	intron_retention	FALSE	canonical	3	29	junction_4	5.13888735674427	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCGTGTTGGGATGTA	4241	False	NA	11	True	AATAAA	-16	NA	120339445	120343667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342247_120342349_120342580_120342671_120343269_120343352
ES.34072.2	chr8	+	2200	9	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-37	5	intron_retention	FALSE	canonical	3	28	junction_5	5.50993421013355	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCGTGTTGGGATGTAT	4244	False	NA	12	True	AATAAA	-17	NA	120339448	120343668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
ES.34072.3	chr8	+	2001	10	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	9.71571210608852	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4244	False	NA	8	True	AATAAA	-13	NA	120339448	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343110_120343269_120343352
ES.34072.4	chr8	+	2418	4	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-26	1	intron_retention	FALSE	canonical	1	1	junction_1	19.6694913225759	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4255	False	NA	8	True	AATAAA	-13	NA	120339459	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120339872_120341482_120342580_120342671_120343269_120343352
ES.34072.6	chr8	+	2268	8	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-17	1	intron_retention	FALSE	canonical	3	28	junction_5	5.55124549363584	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4264	False	NA	8	True	AATAAA	-13	NA	120339468	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120343269_120343352
ES.34072.7	chr8	+	2266	8	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	-4	1	intron_retention	FALSE	canonical	3	28	junction_5	5.64963426665291	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4277	False	NA	8	True	AATAAA	-13	NA	120339481	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342580_120342671_120343269_120343352
ES.34072.8	chr8	+	1898	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	29	-1	29	1	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	4310	False	NA	8	True	AATAAA	-13	NA	120339514	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
ES.34072.9	chr8	+	1635	6	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	2105	1	intron_retention	FALSE	canonical	3	28	junction_2	6.71118469422501	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGCGTGTTGGGAT	6386	False	NA	8	True	AATAAA	-13	NA	120341590	120343664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
ES.34073.1	chr8	-	3030	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2332	-1	1998	1	3prime_fragment	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCAGGCTGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	120360087	120350591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_120353159_120359624
ES.34074.1	chr8	+	177	1	Intergenic	novelGene_27762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTCTGTC	NA	False	NA	NA	False	NA	NA	NA	120416979	120417156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120417000_120417200
ES.34075.1	chr8	+	177	1	Intergenic	novelGene_27763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120464064	120464241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120464100_120464200
ES.34076.1	chr8	+	1529	11	ISM	ENSMUSG00000034112.10	ENSMUST00000095171.5	3222	27	48185	1	48124	-1	3prime_fragment	FALSE	canonical	2	4	junction_1	2.67581763205193	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCATCTCTCTCTCTGCT	NA	False	NA	NA	False	ATTAAA	-21	NA	120474932	120484455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713_120482856_120484106
ES.34077.1	chr8	+	181	1	Intergenic	novelGene_27764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCAACAAAAATGC	8484	False	NA	NA	False	NA	NA	NA	120497544	120497725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120497500_120497700
ES.34078.1	chr8	-	3130	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	-37	-8	-37	8	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGGCTTGGTGTGGCCC	NA	False	NA	NA	False	AATAAA	-28	NA	120505192	120486806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ES.34078.2	chr8	-	2196	4	NNC	ENSMUSG00000034105.10	novel	3085	8	NA	NA	12494	-60	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	13.0213499897497	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGCAAGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	120492639	120486874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_120488570_120489030_120489211_120490674_120490794_120492437
ES.34078.3	chr8	-	3217	8	NIC	ENSMUSG00000034105.10	novel	3085	8	NA	NA	0	-62	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	11.4855721384239	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCTGGCAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	120505135	120486876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120504884
ES.34078.4	chr8	-	1739	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	8	1338	8	-1338	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTGTCTTCTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	120505147	120488152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ES.34078.5	chr8	-	1566	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	9	1510	9	-1510	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTCCTAACTCCTG	NA	False	NA	NA	False	NA	NA	NA	120505146	120488324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ES.34079.1	chr8	+	176	1	Intergenic	novelGene_27765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGGAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	120522163	120522339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120522200_120522300
ES.3408.1	chr10	-	207	1	Intergenic	novelGene_2625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCAACCTACTGGAGC	9154	False	NA	NA	False	NA	NA	NA	81490545	81490338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81490300_81490500
ES.34080.1	chr8	-	1634	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	-38	0	-38	0	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGAGTTGGGTTGTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	120567321	120535960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ES.34081.1	chr8	+	1370	3	FSM	ENSMUSG00000031828.10	ENSMUST00000212636.2	1354	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	18	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTTGAGGCCTCTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	120588988	120597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120589187_120591741_120591819_120596360
ES.34081.2	chr8	+	2188	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	-16	9	-10	-9	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATATTATCTTGTTTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	120588994	120603725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
ES.34081.3	chr8	+	1480	5	NNC	ENSMUSG00000031828.10	novel	2181	5	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	7.49583217528247	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTATCTTGTTTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	120588996	120603727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120589187_120591741_120591819_120596360_120596724_120601113_120601272_120603035
ES.34081.4	chr8	+	1097	1	NIC	ENSMUSG00000031828.10	novel	1354	3	NA	NA	7348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTTGAGGCCTCTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	120596358	120597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120596400_120597500
ES.34082.1	chr8	-	233	1	Intergenic	novelGene_27766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATGGTGTCTGTTCACA	NA	False	NA	NA	False	NA	NA	NA	120599695	120599462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120599500_120599700
ES.34083.1	chr8	+	3376	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	361	-11	-93	6	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTGTGCTCAGCCT	8734	False	NA	45	True	AATAAA	-27	NA	120637459	120684305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.11	chr8	+	3276	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	408.317256858586	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8817	False	NA	36	True	AATAAA	-18	NA	120637542	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667856_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.12	chr8	+	4722	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	740	junction_3	238.660148886794	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8819	False	NA	36	True	AATAAA	-18	NA	120637544	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120681673_120682936_120683003_120683321
ES.34083.14	chr8	+	3286	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	438.849517953802	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8819	False	NA	36	True	AATAAA	-18	NA	120637544	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675529_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.15	chr8	+	5984	12	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	740	junction_3	246.581118364493	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	8819	False	NA	34	True	AATAAA	-16	NA	120637544	120684294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120683003_120683321
ES.34083.16	chr8	+	3301	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	436.648776302137	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTTTCTTGGTGTG	8819	False	NA	37	True	AATAAA	-19	NA	120637544	120684297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682915_120683003_120683321
ES.34083.17	chr8	+	3206	15	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	424.666670003951	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8819	False	NA	39	True	AATAAA	-21	NA	120637544	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321_120683912_120683987
ES.34083.18	chr8	+	3271	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	431.468361233546	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8819	False	NA	35	True	AATAAA	-17	NA	120637544	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683331
ES.34083.19	chr8	+	5800	12	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	740	junction_3	245.112758669984	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGCTGTGTTTCTTGG	8819	False	NA	33	True	AATAAA	-15	NA	120637544	120684293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120681673_120682936_120683003_120683321
ES.34083.20	chr8	+	2560	4	ISM	ENSMUSG00000031826.21	ENSMUST00000143615.8	2129	11	-26	9218	-7	2005	5prime_fragment	FALSE	canonical	3	816	junction_3	406.879452527267	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTTTTGCCTGCATG	8820	False	NA	NA	False	ATTAAA	-16	NA	120637545	120670148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848
ES.34083.21	chr8	+	3131	13	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_11	422.358556205506	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	8823	False	NA	34	True	AATAAA	-16	NA	120637548	120684294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120682936_120683003_120683321
ES.34083.22	chr8	+	2121	11	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	435.634066620139	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8823	False	NA	35	True	AATAAA	-17	NA	120637548	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.23	chr8	+	4739	13	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-4	1	intron_retention	FALSE	canonical	3	816	junction_3	223.156942158055	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8823	False	NA	35	True	AATAAA	-17	NA	120637548	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.24	chr8	+	3220	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	404.702050896706	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8823	False	NA	39	True	AATAAA	-21	NA	120637548	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.26	chr8	+	3308	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	416.647822848054	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8823	False	NA	35	True	AATAAA	-17	NA	120637548	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658556_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.27	chr8	+	3276	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.906328875923	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8826	False	NA	39	True	AATAAA	-21	NA	120637551	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675529_120677106_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.29	chr8	+	4542	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	816	junction_3	221.746273299513	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8826	False	NA	39	True	AATAAA	-21	NA	120637551	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120683003_120683321
ES.34083.3	chr8	+	2457	12	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	418.167944433891	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8811	False	NA	36	True	AATAAA	-18	NA	120637536	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637591_120668466_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.33	chr8	+	3203	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	420.958298277738	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8832	False	NA	39	True	AATAAA	-21	NA	120637557	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.34	chr8	+	7254	11	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	6	0	intron_retention	FALSE	canonical	3	816	junction_3	238.181527411342	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8833	False	NA	36	True	AATAAA	-18	NA	120637558	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120681673_120682936_120683003_120683321
ES.34083.35	chr8	+	4470	12	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	7	0	intron_retention	FALSE	canonical	3	52	junction_2	418.772113021663	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8834	False	NA	36	True	AATAAA	-18	NA	120637559	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120683003_120683321
ES.34083.36	chr8	+	3368	15	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	607.97913833705	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGCTGTGTTTCTTGG	8834	False	NA	33	True	AATAAA	-15	NA	120637559	120684293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120664425_120664529_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678842_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.38	chr8	+	3204	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	444.492969573198	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8834	False	NA	39	True	AATAAA	-21	NA	120637559	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120683321
ES.34083.39	chr8	+	3338	15	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	541.181271264395	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8834	False	NA	39	True	AATAAA	-21	NA	120637559	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120672201_120672273_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.4	chr8	+	3278	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.906328875923	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8811	False	NA	36	True	AATAAA	-18	NA	120637536	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675529_120677116_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.40	chr8	+	6661	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	433.553365469649	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8835	False	NA	36	True	AATAAA	-18	NA	120637560	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120672273_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.41	chr8	+	4852	12	ISM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	462	-5	8	0	intron_retention	FALSE	canonical	3	816	junction_3	230.874657418298	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8835	False	NA	39	True	AATAAA	-21	NA	120637560	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527
ES.34083.44	chr8	+	3255	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	434.103169914915	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8837	False	NA	39	True	AATAAA	-21	NA	120637562	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677106_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.45	chr8	+	3251	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	440.288716464724	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8838	False	NA	39	True	AATAAA	-21	NA	120637563	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674538_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.46	chr8	+	3230	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	424.079790415734	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	8838	False	NA	34	True	AATAAA	-16	NA	120637563	120684294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658626_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.47	chr8	+	8196	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	740	junction_3	237.978800993328	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8838	False	NA	36	True	AATAAA	-18	NA	120637563	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.48	chr8	+	3409	15	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	523.994196883274	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8838	False	NA	36	True	AATAAA	-18	NA	120637563	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667271_120667418_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.49	chr8	+	3081	13	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	445.694113777101	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8842	False	NA	36	True	AATAAA	-18	NA	120637567	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.50	chr8	+	3242	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	429.740144408195	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8843	False	NA	35	True	AATAAA	-17	NA	120637568	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682951_120683003_120683321
ES.34083.52	chr8	+	2958	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-3	-296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.906328875923	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTTTAACGATTACGAG	8843	False	NA	NA	False	AATAAA	-37	NA	120637568	120683998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675529_120677106_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.55	chr8	+	3398	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	431.906328875923	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8843	False	NA	39	True	AATAAA	-21	NA	120637568	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120676960_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.56	chr8	+	3346	15	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	541.500772607661	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8844	False	NA	35	True	AATAAA	-17	NA	120637569	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120669517_120669611_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.57	chr8	+	4173	13	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-1	341	intron_retention	FALSE	canonical	3	816	junction_3	221.746273299513	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAATAAATACAAAA	8845	False	NA	NA	False	GATAAA	-44	NA	120637570	120683949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120683003_120683321
ES.34083.58	chr8	+	2827	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	473	426	0	260	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACACTCTCCTCCTTTAC	8846	False	NA	NA	False	AATGAA	-37	NA	120637571	120683868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.59	chr8	+	3331	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_5	550.402015528854	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8846	False	NA	36	True	AATAAA	-18	NA	120637571	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120669277_120669446_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.6	chr8	+	2966	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	439	321	-15	-321	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCTGGTTCCTAATA	8812	False	NA	NA	False	AATAAA	-12	NA	120637537	120683973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.61	chr8	+	2780	12	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	1	341	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	418.167944433891	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAATAAATACAAAA	8847	False	NA	NA	False	GATAAA	-44	NA	120637572	120683949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.62	chr8	+	3236	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	552.361364437337	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8847	False	NA	36	True	AATAAA	-18	NA	120637572	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675529_120677106_120677182_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.64	chr8	+	579	2	NNC	ENSMUSG00000031826.21	novel	559	7	NA	NA	1	-22590	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATCCTTCATCTTTACT	8847	False	NA	NA	False	AATAAA	-11	NA	120637572	120645553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120645080
ES.34083.65	chr8	+	5873	13	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_4	554.277025352245	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAAGCTGTGTTTCTT	8847	False	NA	31	True	AATAAA	-13	NA	120637572	120684291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120664425_120664529_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120681673_120682936_120683003_120683321
ES.34083.66	chr8	+	3517	12	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	21	1319	2	-628	intron_retention	FALSE	canonical	3	740	junction_3	248.565803516264	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTATAGGCTGTTTGC	8848	False	NA	NA	False	AATAAA	-16	NA	120637573	120682980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527
ES.34083.67	chr8	+	3630	16	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	652.698691757707	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8848	False	NA	39	True	AATAAA	-21	NA	120637573	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120670887_120670986_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679140_120679417_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.68	chr8	+	3269	13	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	638.469828748565	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8849	False	NA	35	True	AATAAA	-17	NA	120637574	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120667848_120668878_120669277_120669446_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.69	chr8	+	3036	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	433.08834525175	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8849	False	NA	39	True	AATAAA	-21	NA	120637574	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668659_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.71	chr8	+	3128	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	440.183528157902	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8851	False	NA	36	True	AATAAA	-18	NA	120637576	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668759_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.72	chr8	+	3246	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	428.574629461138	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8853	False	NA	36	True	AATAAA	-18	NA	120637578	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678842_120679924_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.73	chr8	+	3181	14	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_10	432.073533627713	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8853	False	NA	36	True	AATAAA	-18	NA	120637578	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679982_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.74	chr8	+	2891	14	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	7	341	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	537.975054963809	1539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAATAAATACAAAA	8853	False	NA	NA	False	GATAAA	-44	NA	120637578	120683949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667856_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678842_120679924_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.75	chr8	+	4336	12	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_9	460.116352514491	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8854	False	NA	39	True	AATAAA	-21	NA	120637579	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120679918_120680085_120681527_120683003_120683321
ES.34083.76	chr8	+	3381	15	NNC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	537.108457295134	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8855	False	NA	39	True	AATAAA	-21	NA	120637580	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120671807_120671940_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.77	chr8	+	2232	11	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	490.363946472413	1541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8857	False	NA	36	True	AATAAA	-18	NA	120637582	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668160_120675453_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.78	chr8	+	6200	7	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	-2949	0	intron_retention	FALSE	canonical	3	1237	junction_2	93.8877876332522	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	NA	False	NA	36	True	AATAAA	-18	NA	120667867	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120668878_120673813_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120680085_120681527
ES.34083.79	chr8	+	4651	7	NNC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-2424	341	intron_retention	FALSE	canonical	0	0	junction_4	682.824220913894	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAATAAATACAAAA	77	False	NA	NA	False	GATAAA	-44	NA	120668392	120683949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120668878_120675156_120675213_120675417_120675522_120677097_120677198_120678643_120678838_120679918_120683003_120683321
ES.34083.8	chr8	+	3820	13	NIC	ENSMUSG00000031826.21	novel	3726	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	816	junction_3	222.550914898641	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	8815	False	NA	36	True	AATAAA	-18	NA	120637540	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.80	chr8	+	6219	7	ISM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	31205	3	-2059	0	intron_retention	FALSE	canonical	3	1237	junction_3	87.3072480127255	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	442	False	NA	36	True	AATAAA	-18	NA	120668757	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659
ES.34083.81	chr8	+	2699	11	NNC	ENSMUSG00000031826.21	novel	665	5	NA	NA	-1913	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	438.569082357614	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	588	False	NA	36	True	AATAAA	-18	NA	120668903	120684296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120669611_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ES.34083.82	chr8	+	7978	6	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	574	0	intron_retention	FALSE	canonical	3	1237	junction_1	102.253410701062	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	2081	False	NA	39	True	AATAAA	-21	NA	120671390	120684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918
ES.34083.83	chr8	+	6037	2	NIC	ENSMUSG00000031826.21	novel	424	3	NA	NA	-1189	260	intron_retention	FALSE	canonical	3	1459	junction_1	0	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACACTCTCCTCCTTTAC	4765	False	NA	NA	False	AATGAA	-37	NA	120677512	120683868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120683003_120683321
ES.34083.84	chr8	+	3088	2	NNC	ENSMUSG00000031826.21	novel	459	2	NA	NA	1152	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTGTTTCTTGGTG	8418	False	NA	35	True	AATAAA	-17	NA	120681165	120684295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120682660_120682701
ES.34084.1	chr8	-	6618	1	Intergenic	novelGene_27767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACACCATTACCCAAC	NA	False	NA	NA	False	NA	NA	NA	120648864	120642246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120642200_120648900
ES.34084.2	chr8	-	1566	2	Antisense	novelGene_ENSMUSG00000031826.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAAGAGAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	120646319	120644553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_120645186_120645385
ES.34084.3	chr8	-	158	1	Intergenic	novelGene_27768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120646682	120646524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120646500_120646700
ES.34085.1	chr8	-	3881	1	Intergenic	novelGene_27769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	120653610	120649729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120649700_120653600
ES.34086.1	chr8	-	3405	1	Antisense	novelGene_ENSMUSG00000031826.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTTTTTCTTGGAAG	325	False	NA	NA	False	NA	NA	NA	120667803	120664398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_120664400_120667800
ES.34087.1	chr8	+	160	1	Intergenic	novelGene_27770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAACCTT	7521	False	NA	NA	False	NA	NA	NA	120705239	120705399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_120705200_120705400
ES.34088.1	chr8	-	179	1	Intergenic	novelGene_27771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120705647	120705468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120705500_120705600
ES.34089.1	chr8	+	4164	15	FSM	ENSMUSG00000031825.17	ENSMUST00000132583.8	4182	15	17	1	17	-1	multi-exon	FALSE	canonical	0	0	junction_7	1.49318178288335	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTAGCACATCTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	120719193	120779531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120719340_120737172_120737491_120740748_120740868_120742012_120742146_120742404_120742521_120745591_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
ES.3409.1	chr10	-	175	1	Intergenic	novelGene_2626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATAAGAATACC	3582	False	NA	NA	False	NA	NA	NA	81505701	81505526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81505500_81505700
ES.34090.1	chr8	+	4017	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	-201	-1493	-201	1493	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTATTTTGTTTTTCC	NA	False	NA	NA	False	ATTAAA	-16	NA	120828119	120832136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120828100_120832100
ES.34090.2	chr8	+	2524	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	-200	-1	-200	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTTCATCCTGAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	120828120	120830644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120828100_120830600
ES.34090.3	chr8	+	3539	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	-118	-1098	-118	1098	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGCGTGTATTCTTC	NA	False	NA	NA	False	AAAACA	-17	NA	120828202	120831741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120828200_120831700
ES.34091.1	chr8	-	2963	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	148	-196	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGCCCTCTTCTTCCTG	NA	False	NA	3	True	AATAAA	-27	NA	120828073	120807824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
ES.34091.2	chr8	-	2926	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	-55	198	-55	-198	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCAGCCCTCTTCTTCC	NA	False	NA	1	True	AATAAA	-25	NA	120828276	120807826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ES.34091.3	chr8	-	4595	6	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	171	-205	intron_retention	FALSE	canonical	3	83	junction_2	2.48193472919817	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828050	120807833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120809456_120809968_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ES.34091.4	chr8	-	2615	7	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	155	-206	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	40.552092698432	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCCTCCTGCAGCCCT	NA	False	NA	-7	True	AATAAA	-17	NA	120828066	120807834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120819655_120819741_120827592
ES.34091.5	chr8	-	2100	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	-19	988	-19	525	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCCTGCTTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	120828240	120808616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ES.34092.1	chr8	-	185	1	Intergenic	novelGene_27772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGTGTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	120838923	120838738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120838700_120838900
ES.34093.1	chr8	+	5571	12	FSM	ENSMUSG00000031824.16	ENSMUST00000108951.8	5531	12	-41	1	-40	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.74965556829412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGATTAACTTCTTT	7897	False	NA	NA	False	AATAAA	-15	NA	120840850	120892042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_120841057_120871941_120872403_120876030_120876131_120876822_120876897_120878049_120878121_120879177_120879374_120880169_120880211_120880660_120880740_120883035_120883114_120886697_120886779_120887056_120887152_120887953
ES.34093.2	chr8	+	5213	9	NIC	ENSMUSG00000031824.16	novel	5531	12	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGATTAACTTCTTT	7939	False	NA	NA	False	AATAAA	-15	NA	120840892	120892042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_120841057_120871941_120872403_120876030_120876131_120876822_120876897_120878049_120878121_120883035_120883114_120886697_120886779_120887056_120887152_120887953
ES.34094.1	chr8	+	8717	18	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	40	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.8904340219641	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGAAATTCATCTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	120955234	121308120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120957458_121080728_121080919_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121301826_121301934_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.10	chr8	+	6620	17	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	21074	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	45.4388325114103	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGACGAAATTCATCTT	NA	False	NA	9	True	AATAAA	-16	NA	121236259	121308117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121236403_121280322_121280542_121289364_121289565_121289661_121289729_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.11	chr8	+	4535	16	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	21085	45	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	32.980128697276	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGGGGAATTTTGT	NA	False	NA	5	True	TATAAA	-20	NA	121236270	121306110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121236403_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.12	chr8	+	229	1	Intergenic	novelGene_27781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATCTGTCTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	121256955	121257184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121257000_121257200
ES.34094.13	chr8	+	6705	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-185	-1910	-185	0	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTTTTTGTATCACCA	NA	False	NA	21	True	AATAAA	-28	NA	121262410	121308129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.14	chr8	+	4435	15	NIC	ENSMUSG00000031822.21	novel	4610	16	NA	NA	-155	43	combination_of_known_splicesites	TRUE	canonical	1	4	junction_1	32.3406612076336	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGTTTGGGGAATTTT	NA	False	NA	3	True	TATAAA	-18	NA	121262440	121306108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121262694_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.15	chr8	+	4700	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	-114	24	-114	-24	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAACCTTGC	NA	False	NA	90	True	NA	NA	NA	121262481	121306195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.16	chr8	+	4553	17	NNC	ENSMUSG00000031822.21	novel	4610	16	NA	NA	-48	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	37.6843385904543	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTGCTGGTCAG	NA	False	NA	NA	False	AAAAAG	-19	NA	121262547	121306223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121301826_121301934_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.2	chr8	+	4831	17	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	29161	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4882336653337	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGGTCAGAATGTT	NA	False	NA	NA	False	AAAAAG	-25	NA	120984355	121306229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_120984475_121080728_121080919_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.20	chr8	+	6438	15	NIC	ENSMUSG00000031822.21	novel	4610	16	NA	NA	-36	-10	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	40.2220875456584	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACGAAATTCATCTTTT	NA	False	NA	11	True	AATAAA	-18	NA	121262559	121308119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.21	chr8	+	6279	17	NNC	ENSMUSG00000031822.21	novel	4610	16	NA	NA	-35	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	38.0090449761632	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGAAATTCATCTTTTT	NA	False	NA	12	True	AATAAA	-19	NA	121262560	121308120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207_121307540_121307806
ES.34094.22	chr8	+	4651	16	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	533	41	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	34.102720647414	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGGTTTGGGGAATT	NA	False	NA	1	True	TATAAA	-16	NA	121263128	121306106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121263381_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.23	chr8	+	6263	13	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	740	1	intron_retention	FALSE	canonical	0	0	junction_1	35.7666045355161	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTACTGCTGCTGGT	NA	False	NA	NA	False	AAAAAG	-16	NA	121263335	121306220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121263386_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.24	chr8	+	6620	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	-71	-2057	-71	-7	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAAATTCATCTTTTTGT	NA	False	NA	14	True	AATAAA	-21	NA	121264096	121308122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.25	chr8	+	6476	16	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	-54	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4473631678797	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAGACGAAATTCATC	NA	False	NA	7	True	AATAAA	-14	NA	121264113	121308115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264215_121280355_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.26	chr8	+	4671	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	-22	-157	-22	3	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACTGCTGCTGGTCA	NA	False	NA	NA	False	AAAAAG	-18	NA	121264145	121306222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.27	chr8	+	4529	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	6	-43	6	43	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGTTTGGGGAATTTT	NA	False	NA	3	True	TATAAA	-18	NA	121264173	121306108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.28	chr8	+	4715	17	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	8	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	40.906858761704	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGGTCAGAATGTT	NA	False	NA	NA	False	AAAAAG	-25	NA	121264175	121306229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121280322_121280542_121289364_121289565_121289661_121289729_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.29	chr8	+	3807	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	23	662	23	-662	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAATATTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	121264190	121305403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.3	chr8	+	1752	1	Intergenic	novelGene_27778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAAACCAACTTACAG	NA	False	NA	NA	False	NA	NA	NA	121106673	121108425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121106700_121108400
ES.34094.30	chr8	+	4522	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	26	10	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	36.3581953257713	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCTGGTCAGAATGTT	NA	False	NA	NA	False	AAAAAG	-25	NA	121264193	121306229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.31	chr8	+	6027	16	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	36	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	39.7875469071529	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAAATTCATCTTTTTGT	NA	False	NA	14	True	AATAAA	-21	NA	121264203	121308122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207_121307540_121307806
ES.34094.32	chr8	+	4360	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	37	13	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	36.3581953257713	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGTTATAAAAAGCCTG	NA	False	NA	26	True	ATTAAA	-32	NA	121264204	121306078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.33	chr8	+	4562	16	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.4774419721728	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTGTTTGTACTGCT	NA	False	NA	NA	False	AAAAAG	-10	NA	121264204	121306214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299416_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.34	chr8	+	4221	15	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.7774572577566	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTATTACTTTAATTA	NA	False	NA	9	True	ATTAAA	-15	NA	121264212	121306061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299377_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.35	chr8	+	6548	17	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	50	-13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	40.906858761704	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGACGAAATTCATCT	NA	False	NA	8	True	AATAAA	-15	NA	121264217	121308116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121280322_121280542_121289364_121289729_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121301826_121301934_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.36	chr8	+	6449	16	NNC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	52	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.4774419721728	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGACGAAATTCATCT	NA	False	NA	8	True	AATAAA	-15	NA	121264219	121308116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299416_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.37	chr8	+	6258	15	NIC	ENSMUSG00000031822.21	novel	4492	16	NA	NA	65	-14	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	32.1296004408675	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAGACGAAATTCATC	NA	False	NA	7	True	AATAAA	-14	NA	121264232	121308115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121264302_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.38	chr8	+	2995	1	FSM	ENSMUSG00000098280.3	ENSMUST00000184722.3	59	1	-217	-2719	-217	2719	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGTGTGAATGCCT	NA	False	NA	NA	False	AAAAAG	-20	NA	121265217	121268212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121265200_121268200
ES.34094.39	chr8	+	2270	7	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	34873	-163	973	9	3prime_fragment	FALSE	canonical	3	93	junction_2	14.0880169726694	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGCTGGTCAGAATGT	NA	False	NA	NA	False	AAAAAG	-24	NA	121299040	121306228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.4	chr8	+	5361	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	-960	2726	-960	-662	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTAATATTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	121214225	121305403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.5	chr8	+	7382	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	-261	6	-261	-6	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAATTCATCTTTTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	121214924	121308123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.6	chr8	+	5185	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	38	1904	38	6	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTGCTGCTGGTCAGAA	NA	False	NA	NA	False	AAAAAG	-21	NA	121215223	121306225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.7	chr8	+	4629	15	NIC	ENSMUSG00000031822.21	novel	7127	16	NA	NA	345	-24	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	31.9192220251979	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAACCTTGC	NA	False	NA	90	True	NA	NA	NA	121215530	121306195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121215891_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.8	chr8	+	4718	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	385	2024	385	40	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGTGGTTTGGGGAAT	NA	False	NA	0	True	TATAAA	-15	NA	121215570	121306105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34094.9	chr8	+	6579	16	NNC	ENSMUSG00000031822.21	novel	672	4	NA	NA	21053	-7	at_least_one_novel_splicesite	TRUE	canonical	2	13	junction_1	32.980128697276	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGAAATTCATCTTTTTGT	NA	False	NA	14	True	AATAAA	-21	NA	121236238	121308122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121236403_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ES.34095.1	chr8	-	141	1	Intergenic	novelGene_27773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120976177	120976036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_120976000_120976200
ES.34096.1	chr8	-	151	1	Intergenic	novelGene_27774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	121041542	121041391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121041400_121041500
ES.34097.1	chr8	-	202	1	Intergenic	novelGene_27775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATGTTCATTGAGAAC	NA	False	NA	0	True	NA	NA	NA	121047828	121047626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121047600_121047800
ES.34098.1	chr8	-	149	1	Intergenic	novelGene_27776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9157	False	NA	NA	False	NA	NA	NA	121061154	121061005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121061000_121061200
ES.34099.1	chr8	-	186	1	Intergenic	novelGene_27777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	121095079	121094893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121094900_121095100
ES.341.1	chr1	+	1533	5	Antisense	novelGene_ENSMUSG00000037138.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACTGGAAATCAA	NA	False	NA	NA	False	NA	NA	NA	38548591	38558016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_38548687_38554989_38555069_38555226_38555342_38556233_38556309_38556847
ES.3410.1	chr10	+	1861	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-33	31424	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	6.68331255192114	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGTAATCAATGTGAT	4160	False	NA	NA	False	NA	NA	NA	81647986	81693748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81648118_81656960_81657088_81691636_81691698_81692206
ES.3410.2	chr10	+	2221	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-18	31799	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	6.68331255192114	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAATATTCAGAACATAA	4175	False	NA	NA	False	ATTAAA	-11	NA	81648001	81694123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81648118_81656960_81657088_81691636_81691698_81692206
ES.3410.3	chr10	+	1950	5	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-16	540	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.8851023459307	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATATACTGCCATCT	4177	False	NA	NA	False	AATAAA	-16	NA	81648003	81659734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81648118_81656960_81657088_81657287_81657349_81657885_81659472_81659672
ES.3410.4	chr10	+	1941	4	NNC	ENSMUSG00000094076.8	novel	4725	4	NA	NA	-8	126362	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	16.9901932498329	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGATATACTGCCATC	4185	False	NA	NA	False	AATAAA	-15	NA	81648011	81788686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81648118_81656960_81657088_81657287_81657349_81787039
ES.3410.5	chr10	+	179	1	ISM	ENSMUSG00000094076.8	ENSMUST00000188096.7	4725	4	11469	2657	2528	473	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGTCATTCAAG	7837	False	NA	NA	False	NA	NA	NA	81659488	81659667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81659500_81659700
ES.34100.1	chr8	-	219	1	Intergenic	novelGene_27779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCTCATGGTATAAGGG	NA	False	NA	NA	False	NA	NA	NA	121156482	121156263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121156300_121156500
ES.34101.1	chr8	-	2905	11	Antisense	novelGene_ENSMUSG00000098280.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGGAGCTGGCGGAGG	NA	False	NA	NA	False	NA	NA	NA	121299478	121215456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_121215888_121280319_121280540_121289362_121289562_121293103_121293278_121293663_121293862_121294499_121294692_121294897_121295221_121295788_121296114_121297453_121298081_121299043_121299154_121299372
ES.34101.2	chr8	-	226	1	Intergenic	novelGene_27780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGGTACTCAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	121230737	121230511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121230500_121230700
ES.34101.3	chr8	-	1893	1	FSM	ENSMUSG00000102737.2	ENSMUST00000192004.2	835	1	394	-1452	394	1452	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTTGCTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-27	NA	121264071	121262178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121262200_121264100
ES.34101.4	chr8	-	162	1	Intergenic	novelGene_27782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121275779	121275617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121275600_121275800
ES.34102.1	chr8	-	1625	5	NNC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-58	2	intron_retention	FALSE	canonical	1	1	junction_1	484.211730547702	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCAGCCTAGTGCAAGG	NA	False	NA	NA	False	AATAAA	-23	NA	121315831	121305369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121306032_121308182_121308551_121308820_121308948_121312831_121312932_121315463
ES.34102.13	chr8	-	1439	5	NNC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-63	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	485.566936683296	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAATACAGTTAATTCAA	NA	False	NA	64	True	CATAAA	-30	NA	121315836	121308029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121308551_121308820_121308948_121312831_121313182_121315309_121315579_121315664
ES.34102.14	chr8	-	783	3	NIC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-58	221	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	583.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCTAATTACTACATT	NA	False	NA	32	True	AATATA	-6	NA	121315831	121308061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121308551_121308820_121308948_121315664
ES.34102.15	chr8	-	1036	6	NNC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-56	168	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	547.026653829592	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGAAGATTTTATTTT	NA	False	NA	-21	True	AAAAAG	-21	NA	121315829	121308114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121308551_121308820_121308948_121312831_121312930_121314194_121314290_121315463_121315579_121315664
ES.34102.16	chr8	-	919	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	238	2743	-32	168	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGAAGATTTTATTTT	NA	False	NA	-21	True	AAAAAG	-21	NA	121315805	121308114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ES.34102.17	chr8	-	2674	1	NIC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-24	-4230	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCATTCAGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	121315797	121313123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121313100_121315800
ES.34102.2	chr8	-	3689	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	207	4	-63	-4	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATAGGTTCAGCCTAGT	NA	False	NA	NA	False	AATAAA	-17	NA	121315836	121305375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ES.34102.5	chr8	-	3240	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	1	659	1	-659	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCTGAAGCACCTTTG	NA	False	NA	NA	False	AATAAA	-36	NA	121316042	121306030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ES.34102.6	chr8	-	2636	1	NIC	ENSMUSG00000031821.12	novel	3662	4	NA	NA	4249	-691	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAACTTTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-4	NA	121308698	121306062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121306100_121308700
ES.34102.7	chr8	-	1123	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	147	2630	-123	281	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGAACGGGTTTAATTT	NA	False	NA	92	True	AATACA	-19	NA	121315896	121308001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ES.34102.8	chr8	-	4434	2	ISM	ENSMUSG00000031821.12	ENSMUST00000155609.2	511	3	241	-280	241	280	3prime_fragment	FALSE	canonical	3	1167	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGAACGGGTTTAATT	NA	False	NA	91	True	AATACA	-18	NA	121312706	121308002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_121308551_121308820
ES.34102.9	chr8	-	1119	6	NIC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-26	279	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	542.881423517143	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTAGAACGGGTTTAAT	NA	False	NA	90	True	AATACA	-17	NA	121315799	121308003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121308551_121308820_121308948_121312831_121312932_121314194_121314290_121315463_121315579_121315664
ES.34103.1	chr8	-	180	1	Intergenic	novelGene_27783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121317924	121317744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121317700_121317900
ES.34104.1	chr8	+	177	1	Intergenic	novelGene_27784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCCCATACCAT	NA	False	NA	NA	False	NA	NA	NA	121317951	121318128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121318000_121318100
ES.34105.1	chr8	+	170	1	Intergenic	novelGene_27785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGTAGTCATG	NA	False	NA	NA	False	NA	NA	NA	121341320	121341490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121341300_121341500
ES.34106.1	chr8	+	3178	1	Intergenic	novelGene_27786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGTGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	121363287	121366465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121363300_121366500
ES.34107.1	chr8	+	215	1	Intergenic	novelGene_27787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAGCACCCAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	121369230	121369445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121369200_121369400
ES.34108.1	chr8	+	333	3	FSM	ENSMUSG00000097500.2	ENSMUST00000181474.2	652	3	299	20	299	-20	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTGGAAGGGCACC	NA	False	NA	NA	False	AATAAA	-16	NA	121370987	121380406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121371092_121379913_121379968_121380231
ES.34109.1	chr8	+	3230	1	Antisense	novelGene_ENSMUSG00000031819.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCTGTGCTACCTACAC	NA	False	NA	NA	False	NA	NA	NA	121386466	121389696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_121386500_121389700
ES.3411.1	chr10	-	4041	4	NNC	ENSMUSG00000096718.3	novel	4067	4	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	2.35702260395516	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAACAGTCCTGGAGTG	4797	False	NA	NA	False	AATAAA	-16	NA	81766363	81737744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81741500_81742039_81742101_81742300_81742428_81766265
ES.3411.2	chr10	-	4152	5	NNC	ENSMUSG00000096718.3	novel	4067	4	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.06828373317832	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAACAGTCCTGGAG	4820	False	NA	NA	False	AATAAA	-14	NA	81766340	81737746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_81741500_81742039_81742101_81742300_81742428_81746721_81746858_81766265
ES.3411.3	chr10	-	942	1	ISM	ENSMUSG00000096718.3	ENSMUST00000219144.2	4067	4	26346	1282	6765	-1282	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATTATATACTGCCATC	NA	False	NA	NA	False	AATAAA	-16	NA	81739968	81739026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_81739000_81740000
ES.34110.1	chr8	+	770	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	-21	-4	-21	4	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTTCATTCTTTGGC	NA	False	NA	32	True	AATAAA	-21	NA	121394939	121400950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ES.34110.10	chr8	+	4966	2	FSM	ENSMUSG00000031818.13	ENSMUST00000180856.2	608	2	27	-4385	-20	-1	multi-exon	FALSE	canonical	3	8115	junction_1	0	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGGTTCATTCT	NA	False	NA	27	True	AATAAA	-16	NA	121395026	121400945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121395095_121396047
ES.34110.12	chr8	+	4019	4	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	8115	junction_1	527.642134616088	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGGTTCATTCT	NA	False	NA	27	True	AATAAA	-16	NA	121395027	121400945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121395095_121396047_121399632_121399959_121400092_121400709
ES.34110.13	chr8	+	5255	3	NNC	ENSMUSG00000031818.13	novel	578	3	NA	NA	-13	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	4684.5	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTGTGGTTCATTC	NA	False	NA	26	True	AATAAA	-15	NA	121395033	121400944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121398448_121398485_121400092_121400709
ES.34110.14	chr8	+	1616	4	NIC	ENSMUSG00000031818.13	novel	765	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	8471	junction_2	387.458671631211	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395042	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121396122_121399463_121399632_121399959_121400092_121400709
ES.34110.16	chr8	+	825	5	NNC	ENSMUSG00000031818.13	novel	578	3	NA	NA	138	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	3836.61611156238	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395212	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121395427_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ES.34110.2	chr8	+	5026	3	FSM	ENSMUSG00000031818.13	ENSMUST00000181172.2	578	3	-4354	-94	14	0	multi-exon	FALSE	canonical	3	8471	junction_1	449	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394974	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121399632_121399959_121400092_121400709
ES.34110.3	chr8	+	720	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	45	0	6	0	multi-exon	FALSE	canonical	3	240	junction_1	3735.25865904893	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395005	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ES.34110.6	chr8	+	4349	3	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	-20	0	intron_retention	FALSE	canonical	3	8115	junction_1	627	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395026	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121395095_121396047_121400092_121400709
ES.34110.7	chr8	+	1007	4	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	-20	0	intron_retention	FALSE	canonical	3	8115	junction_1	513.621347773716	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395026	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121395095_121396047_121396122_121399463_121400092_121400709
ES.34110.8	chr8	+	664	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	3769.58608470479	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGGTTCATTCT	NA	False	NA	27	True	AATAAA	-16	NA	121395026	121400945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121395095_121396047_121396122_121399463_121399632_121399973_121400092_121400709
ES.34110.9	chr8	+	1180	5	NNC	ENSMUSG00000031818.13	novel	765	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	102	junction_1	3794.77660739074	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395026	121400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121395596_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ES.34111.1	chr8	-	889	4	FSM	ENSMUSG00000043687.17	ENSMUST00000144417.2	508	4	-49	-332	-49	-1	multi-exon	FALSE	canonical	0	0	junction_3	27.6043474836845	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCGGGTCCTGGTTTTT	NA	False	NA	-2	True	AATAAA	-12	NA	121361151	121335341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121360880
ES.34111.10	chr8	-	4351	6	NNC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-11	-823	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	596.093751015727	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTATTCCAGGAGCT	NA	False	NA	0	True	AATAAA	-31	NA	121394871	121381475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386919_121387522_121387600_121394495
ES.34111.11	chr8	-	1207	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	19	8	combination_of_known_junctions	FALSE	canonical	2	17	junction_3	590.205726844462	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGTACCTTACTCTT	NA	False	NA	-14	True	ATTAAA	-37	NA	121394807	121384563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386927_121387522_121387600_121394495
ES.34111.12	chr8	-	1129	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	-98	3911	-98	8	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGTACCTTACTCTT	NA	False	NA	-14	True	ATTAAA	-37	NA	121394958	121384563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ES.34111.13	chr8	-	3344	2	FSM	ENSMUSG00000031819.14	ENSMUST00000180909.2	571	2	42	-2815	16	1	multi-exon	FALSE	canonical	3	1178	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	False	NA	-21	True	ATTAAA	-30	NA	121394810	121384570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121387600_121394495
ES.34111.14	chr8	-	894	4	NIC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	544.519563978702	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394826	121384571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385743_121385814_121387522_121387600_121394495
ES.34111.15	chr8	-	1151	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	592.891355983539	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394811	121384571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387232_121387410_121387522_121387600_121394495
ES.34111.16	chr8	-	979	5	NNC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	531.102332418151	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394802	121384571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121384988_121385266_121385362_121385743_121385828_121387522_121387600_121394495
ES.34111.18	chr8	-	1022	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	594.120324513478	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394800	121384571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386757_121387522_121387600_121394495
ES.34111.19	chr8	-	2676	4	NIC	ENSMUSG00000031819.14	novel	470	5	NA	NA	20	-2	intron_retention	FALSE	canonical	3	1178	junction_3	46.4829717925464	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTGTACACGGTGTA	NA	False	NA	-24	True	ATTAAA	-27	NA	121394806	121384573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121387600_121394495
ES.34111.2	chr8	-	926	4	FSM	ENSMUSG00000097919.2	ENSMUST00000181333.2	758	4	15	-183	15	183	multi-exon	FALSE	canonical	0	0	junction_3	27.6043474836845	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCGGGTCCTGGTTTTT	NA	False	NA	-2	True	AATAAA	-12	NA	121394803	121335341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121394495
ES.34111.20	chr8	-	4721	2	ISM	ENSMUSG00000031819.14	ENSMUST00000181836.2	470	5	5002	-215	4929	-2	intron_retention	FALSE	canonical	3	1204	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGTGTACACGGTGTA	NA	False	NA	-24	True	ATTAAA	-27	NA	121389573	121384573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_121384988_121385266
ES.34111.21	chr8	-	7121	5	NNC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	526.127598591824	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGAGAAGTGTACACG	NA	False	NA	-29	True	ATTAAA	-22	NA	121394811	121384578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121393587_121394328
ES.34111.22	chr8	-	9575	3	ISM	ENSMUSG00000031819.14	ENSMUST00000181836.2	470	5	-249	-200	2	1	intron_retention	FALSE	canonical	3	1204	junction_1	41.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTTGTAATCCTGAGA	NA	False	NA	-39	True	ATTAAA	-12	NA	121394824	121384588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_121384988_121385266_121385362_121385743
ES.34111.23	chr8	-	6365	1	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	-29	-1139	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGGAAAGGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121394889	121388524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121388500_121394900
ES.34111.24	chr8	-	6134	1	NIC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	2	-1305	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTCTGGACCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	121394824	121388690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121388700_121394800
ES.34111.25	chr8	-	1991	1	NIC	ENSMUSG00000031819.14	novel	4942	5	NA	NA	0	-5450	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121394826	121392835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121392800_121394800
ES.34111.3	chr8	-	769	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	74	1	-55	-1	multi-exon	FALSE	canonical	3	48	junction_3	5.09901951359278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCGGGTCCTGGTTTTT	NA	False	NA	-2	True	AATAAA	-12	NA	121361157	121335341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
ES.34111.4	chr8	-	591	3	NNC	ENSMUSG00000043687.17	novel	844	4	NA	NA	7825	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGCGGGTCCTGGTTT	NA	False	NA	-4	True	AATAAA	-10	NA	121353277	121335343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121335770_121337932_121338077_121353256
ES.34111.5	chr8	-	4910	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	32	0	-2	0	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTCTCTGTGTTCATC	NA	False	NA	0	True	AATAAA	-23	NA	121394828	121380652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ES.34111.6	chr8	-	5122	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	2	17	junction_3	590.205726844462	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCCTCTCTGTGTTCAT	NA	False	NA	-1	True	AATAAA	-22	NA	121394812	121380653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386927_121387522_121387600_121394495
ES.34111.7	chr8	-	5710	5	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	19	-4	intron_retention	FALSE	canonical	3	17	junction_3	523.762589347502	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTCCTCTCTGTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	121394807	121380656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121387600_121394495
ES.34111.8	chr8	-	4950	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	594.120324513478	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCTACCTCCTCTCTG	NA	False	NA	-8	True	AATAAA	-15	NA	121394817	121380660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386757_121387522_121387600_121394495
ES.34111.9	chr8	-	4169	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	-29	802	-29	-802	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGATGTCTGGAGAAA	NA	False	NA	21	True	NA	NA	NA	121394889	121381454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ES.34112.1	chr8	-	158	1	Antisense	novelGene_ENSMUSG00000031818.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCAGAATGAGCGGGGT	NA	False	NA	NA	False	NA	NA	NA	121396636	121396478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_121396500_121396600
ES.34113.1	chr8	-	148	1	Intergenic	novelGene_27788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121403555	121403407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121403400_121403600
ES.34114.1	chr8	-	147	1	Intergenic	novelGene_27789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATAAAGGGGGC	NA	False	NA	NA	False	NA	NA	NA	121408997	121408850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121408800_121409000
ES.34115.1	chr8	+	165	1	Intergenic	novelGene_27790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	121431624	121431789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121431600_121431800
ES.34116.1	chr8	-	398	1	Intergenic	novelGene_27791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121450080	121449682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121449700_121450100
ES.34117.1	chr8	+	207	1	Intergenic	novelGene_27792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGCCCTCTTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	121451095	121451302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121451100_121451300
ES.34118.1	chr8	+	159	1	NIC	ENSMUSG00000097895.2	novel	489	2	NA	NA	236	-286	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	121454237	121454396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121454200_121454400
ES.34119.1	chr8	+	2869	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	-22	0	-22	0	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121463074	121483433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.2	chr8	+	4357	8	NIC	ENSMUSG00000041515.11	novel	2847	9	NA	NA	-20	-4	intron_retention	FALSE	canonical	3	23	junction_1	8.06605383628177	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAATGTTTGTTTCTT	NA	False	NA	14	True	ATTAAA	-18	NA	121463076	121483429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.3	chr8	+	1557	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	2	1288	1	2	multi-exon	FALSE	canonical	3	23	junction_1	7.56637297521078	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGGCTGGCCTTTCTG	NA	False	NA	NA	False	ATTAAA	-31	NA	121463098	121482145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.4	chr8	+	3320	8	ISM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	22	0	-5	0	intron_retention	FALSE	canonical	3	23	junction_1	7.49965985623239	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121463118	121483433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126
ES.34119.5	chr8	+	1648	8	NNC	ENSMUSG00000041515.11	novel	764	4	NA	NA	-2170	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7357679522601	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTATTCTCACAGGC	NA	False	NA	NA	False	NA	NA	NA	121470048	121482347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121470163_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.6	chr8	+	2796	8	NNC	ENSMUSG00000041515.11	novel	764	4	NA	NA	-2055	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.7357679522601	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121470163	121483433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_121470340_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.7	chr8	+	2629	6	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	6788	-1113	-53	0	3prime_fragment	FALSE	canonical	3	35	junction_1	4.84148737476408	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121472165	121483433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ES.34119.8	chr8	+	3334	3	ISM	ENSMUSG00000041515.11	ENSMUST00000162001.8	2270	9	13573	-1113	3	0	3prime_fragment	FALSE	canonical	3	42	junction_1	1	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121478950	121483433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_121480473_121481126_121481243_121481737
ES.3412.1	chr10	+	1868	4	Antisense	novelGene_ENSMUSG00000112051.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	11.0855260988773	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCAATGTGATACTGCC	2303	False	NA	NA	False	NA	NA	NA	81814476	81826869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81814609_81824424_81824552_81824751_81824813_81825321
ES.3412.2	chr10	+	468	4	Antisense	novelGene_ENSMUSG00000112051.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	11.0855260988773	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAGTCTTCAAAAACATGA	2318	False	NA	NA	False	NA	NA	NA	81814491	81825484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_81814609_81824424_81824552_81824751_81824813_81825321
ES.3412.3	chr10	+	5090	1	Intergenic	novelGene_2629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	2319	False	NA	NA	False	NA	NA	NA	81814492	81819582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81814500_81819600
ES.34120.1	chr8	-	133	1	Intergenic	novelGene_27793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	121726620	121726487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_121726500_121726600
ES.34121.1	chr8	-	3921	7	FSM	ENSMUSG00000031816.16	ENSMUST00000149718.8	3347	7	10	-584	10	200	multi-exon	FALSE	canonical	2	11	junction_4	29.3565249230142	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGATGGCAAAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	121835108	121824091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121825892_121827857_121827984_121828162_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ES.34121.10	chr8	-	2409	8	NIC	ENSMUSG00000031816.16	novel	2415	8	NA	NA	2	-5	intron_retention	FALSE	canonical	3	11	junction_5	24.5581359393649	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835129	121824300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831298_121832312_121832427_121833608_121833713_121835026
ES.34121.11	chr8	-	1519	9	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	6	-7	intron_retention	FALSE	canonical	3	48	junction_6	14.260412862186	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTAAGCTGCTTGTAT	NA	False	NA	-18	True	NA	NA	NA	121835076	121824302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ES.34121.12	chr8	-	2247	7	NIC	ENSMUSG00000031816.16	novel	1366	10	NA	NA	669	-12	intron_retention	FALSE	canonical	3	48	junction_5	12.9571944837179	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACACAGTCTAAGCTGCT	NA	False	NA	-23	True	NA	NA	NA	121833713	121824307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608
ES.34121.13	chr8	-	1927	8	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	4	-3	intron_retention	FALSE	canonical	3	48	junction_5	13.1413042560859	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCCTTGCAGGACTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	121835078	121824678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ES.34121.14	chr8	-	1917	8	ISM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	-2	387	-2	-3	5prime_fragment	FALSE	canonical	2	11	junction_5	27.5473618130147	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCCTTGCAGGACTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	121835068	121824678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ES.34121.15	chr8	-	732	5	NIC	ENSMUSG00000031816.16	novel	488	5	NA	NA	3	-35	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	31.2929704566377	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAACAATAAATAA	NA	False	NA	NA	False	AAAAAG	-31	NA	121835079	121830625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121830920_121831130_121831298_121832456_121832571_121833608_121833713_121835026
ES.34121.2	chr8	-	1500	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	55	-495	6	197	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTCAGATGGCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	121835076	121824094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ES.34121.3	chr8	-	1354	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	0	-294	0	0	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835131	121824295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ES.34121.4	chr8	-	1633	10	NNC	ENSMUSG00000031816.16	novel	1366	10	NA	NA	3	0	intron_retention	FALSE	canonical	1	1	junction_5	31.491719468167	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835063	121824295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121828541_121828662_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ES.34121.5	chr8	-	1609	9	NIC	ENSMUSG00000031816.16	novel	1366	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_8	24.2045321169404	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835065	121824295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121834932
ES.34121.6	chr8	-	1321	10	NIC	ENSMUSG00000031816.16	novel	1060	10	NA	NA	15	-5	combination_of_known_junctions	FALSE	canonical	2	11	junction_7	26.1963148854996	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835103	121824300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ES.34121.7	chr8	-	3730	7	NIC	ENSMUSG00000031816.16	novel	2415	8	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	11	junction_4	26.4826987547216	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835073	121824300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_121825892_121827857_121827984_121828162_121829744_121831130_121831298_121832312_121832427_121833608_121833713_121835026
ES.34121.8	chr8	-	3648	7	FSM	ENSMUSG00000031816.16	ENSMUST00000149718.8	3347	7	74	-375	5	-5	multi-exon	FALSE	canonical	2	11	junction_4	29.3565249230142	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835044	121824300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_121825892_121827857_121827984_121828162_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ES.34121.9	chr8	-	2275	8	NNC	ENSMUSG00000031816.16	novel	1520	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_5	30.4577325056833	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTGCTTGTATGT	NA	False	NA	-16	True	NA	NA	NA	121835050	121824300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831243_121832456_121832571_121833608_121833713_121835026
ES.34122.1	chr8	+	177	1	Intergenic	novelGene_27794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121872453	121872630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_121872500_121872600
ES.34123.1	chr8	+	176	1	Antisense	novelGene_ENSMUSG00000097384.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	121983635	121983811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_121983600_121983800
ES.34124.1	chr8	-	3323	2	Intergenic	novelGene_27795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAACTCACAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	122077957	122074554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122074830_122074909
ES.34125.1	chr8	+	2727	1	Intergenic	novelGene_27796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTTTCCAAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	122099194	122101921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122099200_122101900
ES.34126.1	chr8	-	452	2	Intergenic	novelGene_27797	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTCCAGCTGTGTGG	NA	False	NA	52	True	NA	NA	NA	122106296	122105712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122106116_122106247
ES.34126.2	chr8	-	361	2	Intergenic	novelGene_27798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGGATCCACACGTTT	NA	False	NA	-54	True	AATACA	-16	NA	122106311	122105818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122106116_122106247
ES.34127.1	chr8	-	167	1	Intergenic	novelGene_27799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	122256682	122256515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122256500_122256700
ES.34128.1	chr8	-	1114	7	NNC	ENSMUSG00000031809.11	novel	955	7	NA	NA	-14	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4.72581562625261	642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGACTTCTGTGTTTG	NA	False	NA	NA	False	AATAAA	-35	NA	122268707	122257505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122257781_122258436_122258654_122260433_122260471_122262161_122262309_122266605_122266747_122267267_122267313_122268455
ES.34128.2	chr8	-	234	1	Intergenic	novelGene_27800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACTGAGACACCAGGG	NA	False	NA	NA	False	NA	NA	NA	122261292	122261058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122261100_122261300
ES.34129.1	chr8	+	1383	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	-8	27	-8	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	122268810	122270193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122268800_122270200
ES.34129.2	chr8	+	4513	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	7	-3118	7	3118	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTCCCATGCAG	NA	False	NA	NA	False	NA	NA	NA	122268825	122273338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122268800_122273300
ES.3413.1	chr10	+	5009	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17486	0	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGTCAGGGTTTCTA	NA	False	NA	NA	False	AATAAA	-18	NA	81832820	81853064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
ES.3413.2	chr10	+	2349	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17485	-2659	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTATACTGCCATCC	NA	False	NA	NA	False	AATAAA	-20	NA	81832821	81850405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
ES.3413.3	chr10	+	9454	4	Genic_Genomic	ENSMUSG00000112790.2_ENSMUSG00000112381.2	novel	2758	1	NA	NA	-17463	203	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	81832843	81857532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
ES.3413.4	chr10	+	6317	4	Genic_Genomic	ENSMUSG00000112790.2	novel	2758	1	NA	NA	-17463	1331	multi-exon	FALSE	canonical	3	45	junction_1	10.7806410858642	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAATGGTCAGAAAATAT	NA	False	NA	NA	False	AATAAA	-24	NA	81832843	81854395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81832952_81847436_81847564_81847762_81847824_81848374
ES.34130.1	chr8	+	160	1	Intergenic	novelGene_27801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	122298230	122298390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122298200_122298400
ES.34131.1	chr8	-	4328	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	27	3	11	-3	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGACTTGTTTCTCGG	NA	False	NA	NA	False	AGTAAA	-18	NA	122305518	122276181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ES.34131.11	chr8	-	2625	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	-19	1984	intron_retention	FALSE	canonical	3	287	junction_2	21.48373851098	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGAGCTGAATGACCGGTG	NA	False	NA	-19	True	AATAAA	-16	NA	122305505	122278753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122279185_122280843_122281191_122281944_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ES.34131.2	chr8	-	1875	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	-54	2537	-54	2022	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGATGCCTGCTGGTTT	NA	False	NA	19	True	NA	NA	NA	122305599	122278715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ES.34131.3	chr8	-	3505	7	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	10	2022	intron_retention	FALSE	canonical	3	287	junction_2	23.094010767585	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGATGCCTGCTGGTTT	NA	False	NA	19	True	NA	NA	NA	122305519	122278715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122279185_122280843_122281191_122281944_122283091_122285758_122286830_122287124_122287202_122293013_122293086_122305196
ES.34131.5	chr8	-	1701	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	3	1993	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	107.929493236113	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCGGTGCCTGTGGCA	NA	False	NA	-10	True	AATAAA	-25	NA	122305526	122278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122305196
ES.34131.6	chr8	-	2670	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	-50	1993	intron_retention	FALSE	canonical	3	287	junction_2	21.3837626745727	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCGGTGCCTGTGGCA	NA	False	NA	-10	True	AATAAA	-25	NA	122305595	122278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122286830_122287124_122287202_122293013_122293086_122305196
ES.34131.7	chr8	-	1696	9	NNC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	14	1991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	107.327769006907	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGACCGGTGCCTGTGG	NA	False	NA	-12	True	AATAAA	-23	NA	122305515	122278746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305260
ES.34132.1	chr8	+	1819	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	4	709	4	5	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTCTCATTGTCATC	9849	False	NA	21	True	AATAAA	-21	NA	122317103	122324790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ES.34132.2	chr8	+	746	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	67	1719	-49	29	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTCTCCCTAGTAGG	9912	False	NA	22	True	AATAAA	-18	NA	122317166	122323780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ES.34132.3	chr8	+	3143	3	FSM	ENSMUSG00000031812.17	ENSMUST00000180548.2	4138	3	-42	1037	-38	-3	multi-exon	FALSE	canonical	3	2370	junction_1	132	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTTGCCAATAAAAAGAT	9923	False	NA	-10	True	AATAAA	-16	NA	122317177	122323748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122322832_122323334
ES.34132.4	chr8	+	4175	3	FSM	ENSMUSG00000031812.17	ENSMUST00000180548.2	4138	3	-37	0	-33	0	multi-exon	FALSE	canonical	3	2370	junction_1	132	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9928	False	NA	16	True	AATAAA	-16	NA	122317182	122324785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122322832_122323334
ES.34132.5	chr8	+	799	4	FSM	ENSMUSG00000031812.17	ENSMUST00000181948.2	766	4	-35	2	-28	-2	multi-exon	FALSE	canonical	3	5	junction_2	1182.02096240107	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTGCCAATAAAAAGATC	9933	False	NA	-9	True	AATAAA	-17	NA	122317187	122323749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122320390_122322724_122322832_122323334
ES.34132.6	chr8	+	1820	4	FSM	ENSMUSG00000031812.17	ENSMUST00000181948.2	766	4	-20	-1034	-13	0	multi-exon	FALSE	canonical	3	5	junction_2	1182.02096240107	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9948	False	NA	16	True	AATAAA	-16	NA	122317202	122324785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122317304_122320228_122320390_122322724_122322832_122323334
ES.34132.7	chr8	+	620	3	NIC	ENSMUSG00000031812.17	novel	2532	4	NA	NA	-11	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1317	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTTGCCAATAAAAAGAT	9950	False	NA	-10	True	AATAAA	-16	NA	122317204	122323748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122317304_122322724_122322832_122323334
ES.34132.8	chr8	+	1785	5	NNC	ENSMUSG00000031812.17	novel	2532	4	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1250.03919938536	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGAGTGATGTCTCAT	9952	False	NA	14	True	AATAAA	-14	NA	122317206	122324783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122317304_122318979_122319056_122320228_122320285_122322724_122322832_122323334
ES.34132.9	chr8	+	1666	4	NNC	ENSMUSG00000031812.17	novel	2532	4	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1112.54463081512	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGTGATGTCTCATT	9952	False	NA	15	True	AATAAA	-15	NA	122317206	122324784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122317304_122320228_122320285_122322724_122322788_122323334
ES.34133.1	chr8	+	156	1	Intergenic	novelGene_27802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122330232	122330388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122330200_122330400
ES.34134.1	chr8	-	7371	13	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	3	12	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.000946928939	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGATTTTTTGGGGGGG	NA	False	NA	NA	False	AATAAA	-32	NA	122379637	122325429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122328989_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.10	chr8	-	4939	13	NNC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	3	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7082591931223	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGTTGAAAACTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	122379637	122327128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122328989_122331279_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.11	chr8	-	2709	11	NNC	ENSMUSG00000061410.7	novel	625	6	NA	NA	-55	579	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	10.6470653233649	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCCCTCTTTGACGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	122379695	122332373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122332815_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.12	chr8	-	4316	8	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	-58	565	intron_retention	FALSE	canonical	3	32	junction_3	4.3705881545081	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	122379698	122332387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122333057_122333615_122335412_122335818_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.14	chr8	-	3580	1	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	0	-40737	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	122379640	122376060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122376100_122379600
ES.34134.2	chr8	-	7450	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	-6	0	-6	0	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCACCATTCTCAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	122379646	122325441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.5	chr8	-	4836	1	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	971	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATGTTCACCATTCT	NA	False	NA	NA	False	AATAAA	-15	NA	122330282	122325446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122325400_122330300
ES.34134.6	chr8	-	6380	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	1	1063	1	584	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCGTTTTTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	122379639	122326504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.7	chr8	-	6269	13	NIC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	26	580	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.000946928939	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTGTCGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	122379614	122326508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122328989_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.8	chr8	-	5793	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	4	1647	4	0	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTAAGTTTTCTGTT	NA	False	NA	NA	False	AAGAAA	-6	NA	122379636	122327088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ES.34134.9	chr8	-	3659	4	NNC	ENSMUSG00000061410.7	novel	7444	13	NA	NA	947	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.1402688962847	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTTGAAAACTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	122333010	122327127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122329071_122330546_122332008_122332088_122332230_122332896
ES.34135.1	chr8	-	179	1	Intergenic	novelGene_27803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAATCCCACCAGTG	NA	False	NA	NA	False	NA	NA	NA	122383213	122383034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122383000_122383200
ES.34136.1	chr8	-	181	1	Intergenic	novelGene_27804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	122393214	122393033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122393000_122393200
ES.34137.1	chr8	-	178	1	Intergenic	novelGene_27805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAGA	6963	False	NA	NA	False	NA	NA	NA	122425972	122425794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122425800_122426000
ES.34138.1	chr8	+	178	1	Intergenic	novelGene_27806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATGTCTGACAGGT	824	False	NA	NA	False	NA	NA	NA	122439060	122439238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122439100_122439200
ES.34139.1	chr8	+	4099	5	FSM	ENSMUSG00000025318.14	ENSMUST00000026357.12	3637	5	-465	3	-465	-3	multi-exon	FALSE	canonical	2	10	junction_1	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACGCTCAGCTTTCTTGT	NA	False	NA	12	True	AATAAA	-23	NA	122456836	122517557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122457744_122479705_122480484_122508899_122509025_122511298_122512168_122516137
ES.3414.1	chr10	-	3592	1	Intergenic	novelGene_2630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTTGCCTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	81841139	81837547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81837500_81841100
ES.34140.1	chr8	-	1481	4	Antisense	novelGene_ENSMUSG00000025318.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCGATCAACAAACCGG	NA	False	NA	NA	False	NA	NA	NA	122511425	122457295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_122457742_122479703_122480480_122508895_122509023_122511293
ES.34141.1	chr8	+	4475	1	Intergenic	novelGene_27807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTAACTAAGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	122535071	122539546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122535100_122539500
ES.34142.1	chr8	-	2110	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	-34	2	-34	-2	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGCAAGATGACAATGT	402	False	NA	-7	True	AATAAA	-35	NA	122556342	122523053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ES.34142.11	chr8	-	1936	11	NIC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	54.9548905921939	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGGTTTTCTTTCTTCT	464	False	NA	-27	True	AATAAA	-15	NA	122556280	122523073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122556120
ES.34142.12	chr8	-	1960	12	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	7185	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.5385817629942	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGGTTTTCTTTCTTCT	7710	False	NA	-27	True	AATAAA	-15	NA	122549034	122523073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548041_122548098_122548520_122548613_122548919
ES.34142.13	chr8	-	4698	5	NNC	ENSMUSG00000040263.17	novel	1584	10	NA	NA	1270	-5	intron_retention	FALSE	non_canonical	0	0	junction_4	82.4105575760776	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTAAGGTTTTCTTTCT	NA	False	NA	-30	True	AATAAA	-12	NA	122530789	122523076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122529076_122529900
ES.34142.14	chr8	-	3105	8	NNC	ENSMUSG00000040263.17	novel	2834	11	NA	NA	-1	-802	intron_retention	FALSE	canonical	1	2	junction_1	81.0562918531288	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCATCCTCTCTTTGA	464	False	NA	NA	False	NA	NA	NA	122556280	122524087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122526396_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548041_122548098_122548520_122548613_122556120
ES.34142.2	chr8	-	2030	12	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	57.1604960969513	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAGCAAGATGACAATG	465	False	NA	-8	True	AATAAA	-34	NA	122556279	122523054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533330_122540453_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ES.34142.3	chr8	-	6078	11	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	2	3	intron_retention	TRUE	non_canonical	0	0	junction_4	86.3073577396505	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTTCTTCTACAGA	467	False	NA	-22	True	AATAAA	-20	NA	122556277	122523068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122528716_122528919_122529076_122529900_122531846_122533244_122533338_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ES.34142.4	chr8	-	2855	9	NNC	ENSMUSG00000040263.17	novel	2834	11	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_4	84.1634384694447	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCTTTCTTCTACA	463	False	NA	-24	True	AATAAA	-18	NA	122556281	122523070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533240_122533338_122546860_122546960_122548041_122548098_122548520_122548613_122556120
ES.34142.6	chr8	-	2740	11	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	6486	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	83.0349926235921	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCTTTCTTCTACA	7011	False	NA	-24	True	AATAAA	-18	NA	122549733	122523070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548041_122548098_122548520_122549075_122549227
ES.34142.7	chr8	-	1444	7	NNC	ENSMUSG00000040263.17	novel	1584	10	NA	NA	-1266	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	60.1239460522086	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCTTTCTTCTACA	NA	False	NA	-24	True	AATAAA	-18	NA	122533325	122523070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523475_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244
ES.34142.8	chr8	-	3020	10	NIC	ENSMUSG00000040263.17	novel	2834	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	124	junction_3	28.9443911281232	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTTCTTTCTTCTAC	453	False	NA	-25	True	AATAAA	-17	NA	122556291	122523071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ES.34142.9	chr8	-	4738	13	NNC	ENSMUSG00000040263.17	novel	2078	12	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	76.7734763226641	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTTCTTTCTTCTAC	452	False	NA	-25	True	AATAAA	-17	NA	122556292	122523071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122523475_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122528716_122528918_122529076_122529900_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ES.34143.1	chr8	+	7917	3	NNC	ENSMUSG00000097812.2	novel	599	3	NA	NA	-4	7420	intron_retention	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAAATCTT	2121	False	NA	NA	False	NA	NA	NA	122576928	122594780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122577154_122586834_122588318_122588571
ES.34143.2	chr8	+	5644	2	NNC	ENSMUSG00000097812.2	novel	599	3	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCTAAAAAAAAAAAAAAAAA	2124	False	NA	NA	False	AAGAAA	-24	NA	122576931	122587358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122577032_122581814
ES.34143.3	chr8	+	220	1	Intergenic	novelGene_27808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGATGAGCAGGCTT	773	False	NA	NA	False	NA	NA	NA	122590477	122590697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122590500_122590700
ES.34144.1	chr8	+	2432	10	Antisense	novelGene_ENSMUSG00000040010.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCCGCCCCGCCCGCGC	NA	False	NA	NA	False	NA	NA	NA	122608966	122634424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_122609835_122610329_122610506_122611719_122611872_122612647_122612747_122613020_122613122_122613595_122613720_122614234_122614280_122615059_122615163_122623162_122623307_122633804
ES.34144.2	chr8	+	3910	1	FSM	ENSMUSG00000074052.8	ENSMUST00000181944.2	1992	1	-791	-1127	-791	1127	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGGGTGTTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	122633780	122637690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122633800_122637700
ES.34144.3	chr8	+	1992	1	FSM	ENSMUSG00000074052.8	ENSMUST00000181944.2	1992	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGGTGTGTATTATC	NA	False	NA	NA	False	NA	NA	NA	122634571	122636563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122634600_122636600
ES.34145.1	chr8	-	3596	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	-52	-27	-52	27	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTCCCTGTGTAGGAA	NA	False	NA	NA	False	TTTAAA	-45	NA	122634485	122607861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.11	chr8	-	3584	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	740.221588444974	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGTGTTCTGTGGTCT	NA	False	NA	NA	False	TTTAAA	-22	NA	122634426	122607884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610578_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.12	chr8	-	3374	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	783.710086702985	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACTGTGTTCTGTGGTC	NA	False	NA	NA	False	TTTAAA	-21	NA	122634425	122607885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122633804
ES.34145.13	chr8	-	3302	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	710.985681993667	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634423	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804_122634084_122634288
ES.34145.14	chr8	-	4291	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	2143	junction_1	132.877234223926	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634427	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122615167_122623166_122623305_122633804
ES.34145.15	chr8	-	3501	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	741.247913410758	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634423	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615161_122623166_122623305_122633804
ES.34145.16	chr8	-	5984	6	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	0	intron_retention	FALSE	canonical	3	2143	junction_1	126.321177955242	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634423	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122611872_122612647_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.17	chr8	-	3271	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634427	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122608492_122608731_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.18	chr8	-	4300	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_6	992.935515277805	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634423	122607888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122613721_122614235_122614281_122615060_122615167_122622881_122622927_122623166_122623305_122633804
ES.34145.21	chr8	-	3550	11	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	937.454510896396	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634423	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122622881_122622927_122623166_122623305_122633804
ES.34145.22	chr8	-	3497	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	740.221588444974	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634426	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610493_122611717_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.24	chr8	-	3016	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634420	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609181_122609666_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.25	chr8	-	3394	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	74	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634359	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122608334_122608380_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.27	chr8	-	1967	3	NNC	ENSMUSG00000040010.11	novel	618	2	NA	NA	238	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.5	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	1013	False	NA	NA	False	TTTAAA	-16	NA	122610415	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609074_122609136_122609835_122610329
ES.34145.32	chr8	-	3558	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	-1977	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	747.978130663335	2652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	4722	False	NA	NA	False	TTTAAA	-16	NA	122625218	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122624546
ES.34145.33	chr8	-	3619	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	948.065377492502	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634423	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122630887_122631002_122633804
ES.34145.34	chr8	-	3473	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	749.23379792333	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634423	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611840_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.35	chr8	-	3291	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634423	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609396_122609609_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.36	chr8	-	3499	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	740.221588444974	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634423	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611727_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.37	chr8	-	3411	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	781.471278662882	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTGACTGTGTTCTG	NA	False	NA	NA	False	TTTAAA	-16	NA	122634426	122607890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.39	chr8	-	3498	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	741.247913410758	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634424	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623173_122623305_122633804
ES.34145.4	chr8	-	5038	7	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	8	5	intron_retention	FALSE	canonical	3	2143	junction_1	117.416163944985	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634425	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.40	chr8	-	3138	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	-2050	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	748.909445810835	2652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	4649	False	NA	NA	False	TTTAAA	-15	NA	122625291	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122625038
ES.34145.42	chr8	-	4416	6	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	-4473	-3	intron_retention	FALSE	canonical	3	2152	junction_1	115.172218872435	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122615126	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060
ES.34145.43	chr8	-	3414	9	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	778.998716301895	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613676_122615060_122615167_122623166_122623305_122633804
ES.34145.44	chr8	-	4252	8	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	intron_retention	FALSE	canonical	3	2143	junction_1	124.199641788566	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.45	chr8	-	2747	6	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	940.287913354202	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609607_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.46	chr8	-	3420	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634425	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122608462_122608547_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.48	chr8	-	3149	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122608550_122608904_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.49	chr8	-	3348	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634426	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609480_122609638_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.5	chr8	-	4726	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	5	intron_retention	FALSE	canonical	3	2143	junction_1	130.956039856892	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634423	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122609835_122610329_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.50	chr8	-	3486	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	738.107489913676	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634426	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612724_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.51	chr8	-	3307	8	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	820.348308304939	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611885_122613605_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.52	chr8	-	3501	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	738.107489913676	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGCTGACTGTGTTCT	NA	False	NA	NA	False	TTTAAA	-15	NA	122634423	122607891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612738_122613014_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.53	chr8	-	3346	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTGCTGACTGTGTTC	NA	False	NA	NA	False	TTTAAA	-14	NA	122634423	122607892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122608550_122608706_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.54	chr8	-	3387	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	10	120	10	-120	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGGCTAGCCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	122634423	122608008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.55	chr8	-	3226	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	7	284	7	-284	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCCCAGTGCTTTCTA	NA	False	NA	-2	True	NA	NA	NA	122634426	122608172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.56	chr8	-	2322	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	10	1185	10	467	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGAAGTCCTGGCTCC	NA	False	NA	NA	False	NA	NA	NA	122634423	122609073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.57	chr8	-	1969	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	7	1541	7	111	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAGCGAGATGATTATT	NA	False	NA	NA	False	NA	NA	NA	122634426	122609429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.58	chr8	-	2064	1	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	-182	-6247	mono-exon	FALSE	NA	NA	NA	NA	NA	2460	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	6517	False	NA	NA	False	NA	NA	NA	122623423	122621359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_122621400_122623400
ES.34145.6	chr8	-	3644	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_3	920.877847491186	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634427	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122610834_122610963_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.7	chr8	-	3143	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	-1713	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	748.599004231105	2652	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	4986	False	NA	NA	False	TTTAAA	-23	NA	122624954	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122624704
ES.34145.8	chr8	-	3443	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	736.813275171624	2653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634423	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609835_122610329_122610439_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34145.9	chr8	-	3409	11	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	710.985681993667	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTCTGTGGTCTG	NA	False	NA	NA	False	TTTAAA	-23	NA	122634427	122607883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122609503_122609609_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ES.34146.1	chr8	+	245	1	Intergenic	novelGene_27809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAGAAAAAAATGAAA	NA	False	NA	NA	False	AATAAA	-45	NA	122651162	122651407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122651200_122651400
ES.34147.1	chr8	+	160	1	Intergenic	novelGene_27812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAACATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	122663934	122664094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122663900_122664100
ES.34148.10	chr8	-	158	1	Intergenic	novelGene_27811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	122658828	122658670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122658700_122658800
ES.34148.2	chr8	-	1580	4	NNC	ENSMUSG00000025317.8	novel	1249	7	NA	NA	3422	654	intron_retention	FALSE	canonical	1	2	junction_3	44.342104395509	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAACAAAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	122650791	122642210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122643247_122644726_122644883_122650293_122650602_122650711
ES.34148.3	chr8	-	1858	7	Fusion	ENSMUSG00000103904.2_ENSMUSG00000025317.8	novel	1249	7	NA	NA	-10	654	multi-exon	FALSE	canonical	0	0	junction_4	42.9641323276366	94	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAACAAAAATCCAAA	4065	False	NA	NA	False	NA	NA	NA	122674596	122642210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505_122650602_122653821_122653941_122666373_122666572_122674406
ES.34148.5	chr8	-	1697	4	NNC	ENSMUSG00000025317.8	novel	1249	7	NA	NA	3568	654	intron_retention	FALSE	canonical	0	0	junction_2	44.312024954357	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAACAAAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	122650645	122642210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122643247_122644726_122644883_122647787_122647941_122650293
ES.34148.6	chr8	-	907	5	NNC	ENSMUSG00000025317.8	novel	1249	7	NA	NA	3501	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.3660704160321	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	122650712	122642884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_122643247_122644726_122644883_122647821_122647941_122650293_122650357_122650505
ES.34148.8	chr8	-	793	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20924	22	3494	-22	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122650719	122642886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
ES.34148.9	chr8	-	182	1	Intergenic	novelGene_27810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAATCCCGTCT	NA	False	NA	NA	False	NA	NA	NA	122656714	122656532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122656500_122656700
ES.34149.1	chr8	+	2648	15	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-1814	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.3906811560971	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122674674	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122675147_122676524_122676660_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.10	chr8	+	2020	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677273	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.11	chr8	+	2146	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677273	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.12	chr8	+	2316	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	66.8889391268451	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTCAGTGTTGTTGCA	NA	False	NA	9	True	AATAAA	-17	NA	122677275	122752918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705340_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.13	chr8	+	2365	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGTGTTGTTGCACC	NA	False	NA	11	True	AATAAA	-19	NA	122677275	122752920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.14	chr8	+	4392	3	NNC	ENSMUSG00000025316.17	novel	513	5	NA	NA	-7	-19104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACATGACTCTAATTTAT	NA	False	NA	NA	False	NA	NA	NA	122677275	122684122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122679194_122679366_122680013
ES.34149.15	chr8	+	2229	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGGCTCAGTGTTGT	NA	False	NA	5	True	AATAAA	-13	NA	122677279	122752914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.16	chr8	+	2327	14	NNC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.3761810374306	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGAGGCTCAGTGTTG	NA	False	NA	4	True	AATAAA	-12	NA	122677279	122752913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705317_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732419_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.17	chr8	+	2144	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	2	3298	2	2	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677284	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.18	chr8	+	2216	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	73	0	-10	0	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677303	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.19	chr8	+	2227	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-15	-242	-10	2	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTCAGTGTTGTTGCA	NA	False	NA	9	True	AATAAA	-17	NA	122677303	122752918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.2	chr8	+	5378	13	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-1783	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.2956644598541	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTGATGGACCT	NA	False	NA	9	True	AATAAA	-23	NA	122674705	122756001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122674876_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.21	chr8	+	3415	12	ISM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	74	217	-9	2	intron_retention	FALSE	canonical	3	61	junction_4	52.260631011489	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677304	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741
ES.34149.22	chr8	+	3663	12	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-9	1	intron_retention	FALSE	canonical	3	31	junction_10	67.2909066345705	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677304	122752917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.24	chr8	+	1835	12	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	-7	-12	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	73.218342099741	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAATGGAAAAAA	NA	False	NA	NA	False	TTTAAA	-33	NA	122677306	122752664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.25	chr8	+	3747	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	94	junction_9	46.2771691970121	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677306	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741
ES.34149.26	chr8	+	2291	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	78.84986858041	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677307	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705340_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.27	chr8	+	2090	12	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	73.218342099741	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGTGTTGTTGCACC	NA	False	NA	11	True	AATAAA	-19	NA	122677307	122752920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.28	chr8	+	1957	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	-15	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	80.1271125566538	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAAATGGAAA	NA	False	NA	NA	False	TTTAAA	-30	NA	122677307	122752661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.29	chr8	+	4902	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	1	intron_retention	FALSE	non_canonical	0	0	junction_8	69.1855395938262	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.3	chr8	+	2598	15	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-1773	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	80.6887443785548	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122674715	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122675147_122676524_122676660_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.30	chr8	+	5388	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.9844445945462	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTGTCTTGATGGAC	NA	False	NA	7	True	AATAAA	-21	NA	122677307	122755999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705317_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.31	chr8	+	1478	8	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	96.8000252993726	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGGCTCAGTGTTGTT	NA	False	NA	6	True	AATAAA	-14	NA	122677307	122752915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.33	chr8	+	3756	14	NNC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.80259570291	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677307	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122722134_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.34	chr8	+	1907	11	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	89.0810866570452	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677307	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.35	chr8	+	2214	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	80.1271125566538	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTCAGTGTTGTTGCA	NA	False	NA	9	True	AATAAA	-17	NA	122677307	122752918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.36	chr8	+	5164	12	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	1	intron_retention	FALSE	canonical	3	107	junction_5	40.2284796942713	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	False	NA	8	True	AATAAA	-16	NA	122677307	122752917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122733902_122734491_122734531_122747257_122747384_122750741
ES.34149.37	chr8	+	2088	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.9844445945462	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677307	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705317_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.38	chr8	+	3500	13	NNC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-3	-12	intron_retention	FALSE	non_canonical	0	0	junction_7	86.2916163688893	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAATGGAAAAAA	NA	False	NA	NA	False	TTTAAA	-33	NA	122677310	122752664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724021_122727702_122727871_122732292_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741
ES.34149.39	chr8	+	2108	14	NNC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	80.5487099496709	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAAATGGAAA	NA	False	NA	NA	False	TTTAAA	-30	NA	122677311	122752661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718237_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.4	chr8	+	2547	15	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-1772	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	80.2675691239072	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGTGTTGTTGCACC	NA	False	NA	11	True	AATAAA	-19	NA	122674716	122752920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122674876_122676524_122676660_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.40	chr8	+	5589	15	NNC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.9958332368783	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTGTCTTGATGGAC	NA	False	NA	7	True	AATAAA	-21	NA	122677315	122755999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122679189_122679366_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.42	chr8	+	5167	12	NIC	ENSMUSG00000025316.17	novel	1970	13	NA	NA	2	-1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	86.2362697180023	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTGTCTGTCTTGATG	NA	False	NA	4	True	AATAAA	-18	NA	122677315	122755996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.43	chr8	+	6566	11	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	0	-7	intron_retention	FALSE	canonical	3	31	junction_10	69.9897135299181	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGACAATTGTCTGTC	NA	False	NA	-2	True	AATAAA	-12	NA	122677318	122755990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741
ES.34149.44	chr8	+	1920	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	78.4128585685338	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677326	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705340_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.45	chr8	+	5274	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	15	-3319	-1	-2	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAATTGTCTGTCTTGAT	NA	False	NA	3	True	AATAAA	-17	NA	122677333	122755995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.46	chr8	+	5264	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	106	-3081	2	0	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCTGTCTTGATGG	NA	False	NA	5	True	AATAAA	-19	NA	122677336	122755997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.47	chr8	+	2051	12	NIC	ENSMUSG00000025316.17	novel	1970	13	NA	NA	8	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	86.2362697180023	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677351	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.48	chr8	+	2866	3	NNC	ENSMUSG00000025316.17	novel	513	5	NA	NA	11	-20556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGCTTGGGATCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	122677354	122682670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122677388_122679189_122679366_122680013
ES.34149.49	chr8	+	1947	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	37	-14	12	-7	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAACATCCAACCAA	NA	False	NA	NA	False	NA	NA	NA	122677355	122752690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.5	chr8	+	5805	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-314	4	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTGATGGACCT	NA	False	NA	9	True	AATAAA	-23	NA	122676916	122756001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.50	chr8	+	6739	1	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	41	-19103	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATGACTCTAATTTATT	NA	False	NA	NA	False	NA	NA	NA	122677384	122684123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677400_122684100
ES.34149.51	chr8	+	5188	1	Intergenic	novelGene_27813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGGATCTTTGTGTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	122677488	122682676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122677500_122682700
ES.34149.52	chr8	+	2220	1	Intergenic	novelGene_27814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGGCTTTTGGATTT	NA	False	NA	NA	False	AATAAA	-20	NA	122688573	122690793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122688600_122690800
ES.34149.53	chr8	+	174	1	Intergenic	novelGene_27816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGTATTCTTTAAAAA	1649	False	NA	NA	False	NA	NA	NA	122695869	122696043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122695900_122696000
ES.34149.54	chr8	+	6860	14	NNC	ENSMUSG00000025316.17	novel	1521	12	NA	NA	-4836	3	intron_retention	TRUE	non_canonical	0	0	junction_1	70.7613708009754	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCAGTGTTGTTGCAC	2130	False	NA	10	True	AATAAA	-18	NA	122696350	122752919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_122697807_122698013_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.55	chr8	+	4557	10	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-1144	-15	intron_retention	FALSE	canonical	3	94	junction_6	49.6879149179042	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAAATGGAAA	9696	False	NA	NA	False	TTTAAA	-30	NA	122703916	122752661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741
ES.34149.56	chr8	+	4041	10	ISM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	36980	3298	-3934	2	3prime_fragment	FALSE	non_canonical	0	0	junction_5	75.3679042275578	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	4747	False	NA	NA	False	NA	NA	NA	122714262	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.57	chr8	+	6158	8	NIC	ENSMUSG00000025316.17	novel	1970	13	NA	NA	-33	2	intron_retention	FALSE	canonical	3	180	junction_2	27.952583758492	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTGTCTTGATGGAC	8794	False	NA	7	True	AATAAA	-21	NA	122718309	122755999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122718443_122723778_122724019_122727702_122727871_122732290_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.58	chr8	+	243	1	Intergenic	novelGene_27817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTAGTGTATAGG	NA	False	NA	NA	False	AATAAA	-13	NA	122732857	122733100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_122732900_122733100
ES.34149.59	chr8	+	1275	5	ISM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	56319	0	5964	0	3prime_fragment	FALSE	canonical	3	191	junction_3	30.4825769907992	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122733549	122752916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.6	chr8	+	2411	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	-42	3075	10	6	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGTGTTGTTGCACCGT	NA	False	NA	13	True	AATAAA	-21	NA	122677240	122752922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.60	chr8	+	934	4	ISM	ENSMUSG00000025316.17	ENSMUST00000173396.2	780	7	9939	-572	6181	2	3prime_fragment	FALSE	canonical	3	31	junction_2	100.608150763246	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTCAGTGTTGTTGCA	NA	False	NA	9	True	AATAAA	-17	NA	122733766	122752918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122733902_122734491_122734531_122750741_122750886_122752302
ES.34149.61	chr8	+	8350	3	ISM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	62256	-23	11989	2	3prime_fragment	FALSE	canonical	3	191	junction_1	38.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122739574	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122747384_122750741_122750886_122752302
ES.34149.62	chr8	+	10433	1	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	14681	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122742266	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122742300_122752700
ES.34149.63	chr8	+	5625	3	ISM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	65279	7	14924	-7	3prime_fragment	FALSE	canonical	3	191	junction_1	38.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCACAGAGGCTCAGT	NA	False	NA	0	True	AATAAA	-8	NA	122742509	122752909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122747384_122750741_122750886_122752302
ES.34149.64	chr8	+	8718	1	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	16611	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGAGGCTCAGTGTTGT	NA	False	NA	5	True	AATAAA	-13	NA	122744196	122752914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122744200_122752900
ES.34149.65	chr8	+	4595	2	ISM	ENSMUSG00000025316.17	ENSMUST00000173396.2	780	7	22860	-353	19102	2	3prime_fragment	FALSE	canonical	3	268	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122746687	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_122750886_122752302
ES.34149.7	chr8	+	5478	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	-32	-2	20	2	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTGTCTTGATGGAC	NA	False	NA	7	True	AATAAA	-21	NA	122677250	122755999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.8	chr8	+	2045	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	27	217	-25	2	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCAACCAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	122677257	122752699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ES.34149.9	chr8	+	5330	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAATTGTCTGTCTTGA	NA	False	NA	2	True	AATAAA	-16	NA	122677258	122755994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
ES.3415.1	chr10	-	174	2	Intergenic	novelGene_2631	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	439	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	81879618	81873349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81873475_81879569
ES.3415.2	chr10	-	347	1	Intergenic	novelGene_2632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTTTGGAATAAGCCA	NA	False	NA	NA	False	NA	NA	NA	81879620	81879273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81879300_81879600
ES.3415.3	chr10	-	219	1	Intergenic	novelGene_2633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCGATTCCCAACAAC	NA	False	NA	NA	False	NA	NA	NA	81879619	81879400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81879400_81879600
ES.34150.1	chr8	-	153	1	Intergenic	novelGene_27815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAATAAATAAATCT	9311	False	NA	NA	False	NA	NA	NA	122690151	122689998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122690000_122690200
ES.34151.1	chr8	-	2396	1	Intergenic	novelGene_27818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAAAGAAAGGAACAC	NA	False	NA	NA	False	NA	NA	NA	122831419	122829023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122829000_122831400
ES.34151.2	chr8	-	2135	2	Intergenic	novelGene_27819	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTTTTGATTTCACAA	NA	False	NA	NA	False	AATAAA	-8	NA	122831419	122829074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_122831136_122831345
ES.34152.1	chr8	+	3169	10	NNC	ENSMUSG00000049577.16	novel	865	5	NA	NA	-980	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.1787983023002	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGCCCAGCCTGTTG	NA	False	NA	13	True	AATAAA	-22	NA	123007899	123063993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123008058_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ES.34152.2	chr8	+	3478	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	-74	-14	-74	14	multi-exon	FALSE	canonical	3	32	junction_1	9.32274531706801	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTGTCTTAGATCTA	NA	False	NA	24	True	AATAAA	-33	NA	123008805	123064004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ES.34152.3	chr8	+	3271	9	NIC	ENSMUSG00000049577.16	novel	3390	10	NA	NA	-18	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.74124795738	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCGCTGGAGGCCCAGC	NA	False	NA	7	True	AATAAA	-16	NA	123008861	123063987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123009262_123032096_123032220_123034230_123034381_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ES.34152.4	chr8	+	4266	9	NIC	ENSMUSG00000049577.16	novel	3390	10	NA	NA	-17	610	intron_retention	FALSE	canonical	3	32	junction_1	7.69638713943107	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGGCCTGCCCAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	123008862	123064600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061767_123061851_123061999_123062170
ES.34152.6	chr8	+	3314	10	NNC	ENSMUSG00000049577.16	novel	3390	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	17.6579293558391	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGAGGCCCAGCCTG	NA	False	NA	10	True	AATAAA	-19	NA	123008870	123063990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061275_123061422_123061670_123061767_123061851_123061999_123062170
ES.34152.7	chr8	+	3243	11	NNC	ENSMUSG00000049577.16	novel	3390	10	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.0129362545094	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGAGGCCCAGCCTG	NA	False	NA	10	True	AATAAA	-19	NA	123008941	123063990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123009066_123009150_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ES.34152.8	chr8	+	1819	1	NIC	ENSMUSG00000049577.16	novel	3390	10	NA	NA	799	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCGCTGGAGGCCCAGC	NA	False	NA	7	True	AATAAA	-16	NA	123062168	123063987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123062200_123064000
ES.34152.9	chr8	+	3823	2	ISM	ENSMUSG00000109957.2_ENSMUSG00000049577.16	ENSMUST00000210581.2	252	3	-3515	416	1025	-416	5prime_fragment	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGATATTTCTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	123062394	123069423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123065995_123069200
ES.34153.1	chr8	+	177	1	Intergenic	novelGene_27820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACATATTTACA	7454	False	NA	NA	False	NA	NA	NA	123072963	123073140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123073000_123073100
ES.34154.1	chr8	+	292	1	Intergenic	novelGene_27821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAGGAGAAGGGAAAAAA	8417	False	NA	NA	False	AATAAA	-10	NA	123073926	123074218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123073900_123074200
ES.34155.1	chr8	-	165	1	Intergenic	novelGene_27822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123081808	123081643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123081600_123081800
ES.34156.1	chr8	+	155	1	Intergenic	novelGene_27823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATCTTTAG	NA	False	NA	NA	False	NA	NA	NA	123092345	123092500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123092300_123092500
ES.34157.1	chr8	+	3858	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	-46	-2	-46	1	multi-exon	FALSE	canonical	3	64	junction_3	72.8266375428831	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTCCTGGTAATGTC	859	False	NA	16	True	AATAAA	-17	NA	123103301	123144100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.10	chr8	+	3729	18	NNC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	107.852263428468	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	927	False	NA	15	True	AATAAA	-16	NA	123103369	123144099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123117281_123117360_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.11	chr8	+	3852	20	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.097081967674	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	928	False	NA	14	True	AATAAA	-15	NA	123103370	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123104424_123104490_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.13	chr8	+	3279	17	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	77.514086421437	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	938	False	NA	14	True	AATAAA	-15	NA	123103380	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123129968_123135024_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.14	chr8	+	3819	19	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	90.1110426085505	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTTCTGGTCCTGGT	938	False	NA	10	True	AATAAA	-11	NA	123103380	123144094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138489_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.15	chr8	+	3787	19	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	92.2417649976221	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	938	False	NA	14	True	AATAAA	-15	NA	123103380	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134971_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.16	chr8	+	1998	9	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	100.172351474846	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	938	False	NA	14	True	AATAAA	-15	NA	123103380	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110332_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.17	chr8	+	3267	17	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	77.514086421437	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	938	False	NA	14	True	AATAAA	-15	NA	123103380	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123129968_123135036_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.18	chr8	+	3620	17	NIC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	74.2133484876542	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	938	False	NA	14	True	AATAAA	-15	NA	123103380	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.19	chr8	+	3252	15	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	79.0934928565233	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	940	False	NA	14	True	AATAAA	-15	NA	123103382	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110738_123125861_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.2	chr8	+	3767	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	-62	0	-28	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	877	False	NA	15	True	AATAAA	-16	NA	123103319	123144099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.21	chr8	+	3374	20	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	90.0814036290421	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	942	False	NA	15	True	AATAAA	-16	NA	123103384	123144099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214_123143643_123144042
ES.34157.22	chr8	+	3467	17	NNC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.8079833640769	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	948	False	NA	15	True	AATAAA	-16	NA	123103390	123144099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113649_123125017_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.23	chr8	+	3584	17	NIC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	77.142902095721	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	954	False	NA	14	True	AATAAA	-15	NA	123103396	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.24	chr8	+	3096	4	FSM	ENSMUSG00000017478.16	ENSMUST00000177386.2	2895	4	51	-252	18	252	multi-exon	FALSE	canonical	3	64	junction_3	80.3920946915111	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCTGTTTTCTTAGCA	995	False	NA	NA	False	AATAAA	-2	NA	123103437	123116735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431
ES.34157.25	chr8	+	3316	18	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	73.3127631840101	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	1004	False	NA	14	True	AATAAA	-15	NA	123103446	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143537
ES.34157.26	chr8	+	3628	18	NNC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	73.5429164069064	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCTGGTCCTGGTAAT	1008	False	NA	13	True	AATAAA	-14	NA	123103450	123144097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139884_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.27	chr8	+	4477	19	NNC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	91.0922236520579	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	1188	False	NA	14	True	AATAAA	-15	NA	123103630	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123104490_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.28	chr8	+	4404	18	NNC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	214	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	73.4055898609729	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTCCTGGTAATGTC	1191	False	NA	16	True	AATAAA	-17	NA	123103633	123144100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123104490_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.29	chr8	+	4723	3	ISM	ENSMUSG00000017478.16	ENSMUST00000176629.8	3672	18	17394	17617	-9195	-6385	internal_fragment	FALSE	canonical	3	246	junction_2	16	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	3352	False	NA	NA	False	NA	NA	NA	123120813	123126481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123124706_123124974_123125068_123125743
ES.34157.3	chr8	+	3654	17	NIC	ENSMUSG00000017478.16	novel	3672	18	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	75.2868472908781	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	923	False	NA	14	True	AATAAA	-15	NA	123103365	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.30	chr8	+	2708	14	ISM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	21592	1	-5035	0	3prime_fragment	FALSE	canonical	3	228	junction_8	35.2717262769518	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	7512	False	NA	14	True	AATAAA	-15	NA	123124973	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.31	chr8	+	2578	13	NIC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	-5035	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	85.3884506241916	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTTCTGGTCCTGGT	7512	False	NA	10	True	AATAAA	-11	NA	123124973	123144094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.32	chr8	+	3132	8	FSM	ENSMUSG00000017478.16	ENSMUST00000177123.2	4789	8	1657	0	1482	0	multi-exon	FALSE	canonical	3	228	junction_2	32.8801161922571	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	NA	False	NA	14	True	AATAAA	-15	NA	123136238	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.33	chr8	+	4850	4	NIC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	-1355	0	intron_retention	FALSE	canonical	3	279	junction_2	18.9267594221045	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	NA	False	NA	14	True	AATAAA	-15	NA	123136708	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123139890_123140001_123140690_123142774_123142872_123143214
ES.34157.34	chr8	+	3900	7	NIC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	-1307	0	intron_retention	FALSE	canonical	3	228	junction_2	32.0762979299184	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	NA	False	NA	14	True	AATAAA	-15	NA	123136756	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123137725_123138022_123138167_123138376_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.35	chr8	+	4034	4	NIC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	1152	0	intron_retention	FALSE	canonical	3	290	junction_2	13.7679176187089	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	NA	False	NA	14	True	AATAAA	-15	NA	123139215	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123139890_123140001_123140202_123140595_123142872_123143214
ES.34157.36	chr8	+	3234	1	NIC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	2799	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTCTGGTCCTGGTAA	NA	False	NA	12	True	AATAAA	-13	NA	123140862	123144096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123140900_123144100
ES.34157.4	chr8	+	5006	17	NIC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	-15	0	intron_retention	FALSE	canonical	3	173	junction_3	40.5275754887953	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	924	False	NA	15	True	AATAAA	-16	NA	123103366	123144099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.5	chr8	+	3647	20	NNC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	90.0814036290421	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTCTGGTCCTGGTAA	924	False	NA	12	True	AATAAA	-13	NA	123103366	123144096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214_123143669_123143810
ES.34157.6	chr8	+	4437	17	NIC	ENSMUSG00000017478.16	novel	3810	19	NA	NA	-14	0	intron_retention	FALSE	canonical	3	173	junction_3	43.1115921185938	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	925	False	NA	14	True	AATAAA	-15	NA	123103367	123144098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.7	chr8	+	3598	17	NIC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	-14	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	74.1611421163401	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTCTGGTCCTGGTAA	925	False	NA	12	True	AATAAA	-13	NA	123103367	123144096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34157.8	chr8	+	3722	18	FSM	ENSMUSG00000017478.16	ENSMUST00000176629.8	3672	18	-51	1	-13	-1	multi-exon	FALSE	canonical	0	0	junction_13	92.7204751130532	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTCTGGTCCTGGTAAT	926	False	NA	13	True	AATAAA	-14	NA	123103368	123144097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ES.34158.1	chr8	-	4176	1	Intergenic	novelGene_27824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGAAAACTTAACTTAGG	NA	False	NA	NA	False	NA	NA	NA	123122591	123118415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123118400_123122600
ES.34158.2	chr8	-	235	1	Intergenic	novelGene_27825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGACCCTCCCTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	123119818	123119583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123119600_123119800
ES.34159.1	chr8	-	1449	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	29	-734	4	734	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGAAGGGTTTCATC	NA	False	NA	NA	False	AATAAA	-16	NA	123159640	123150780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
ES.34159.2	chr8	-	778	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	-28	-6	-28	6	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCTCCATATGAGG	NA	False	NA	NA	False	AATAAA	-24	NA	123159697	123151508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
ES.34159.3	chr8	-	741	6	NNC	ENSMUSG00000006519.12	novel	744	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	338.552566080956	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACAAGAAATTCTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	123159672	123151514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123151827_123152924_123153007_123153680_123153759_123153967_123154043_123154393_123154464_123159548
ES.34159.5	chr8	-	735	6	NNC	ENSMUSG00000006519.12	novel	744	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	323.572928410274	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACAAGAAATTCTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	123159668	123151514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154035_123154393_123154464_123159548
ES.3416.1	chr10	-	1101	2	Intergenic	novelGene_2634	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCATGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	81883840	81882450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81883434_81883722
ES.34160.1	chr8	-	1921	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	-161	-4	-161	4	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGTGCTTTCTT	NA	False	NA	-4	True	AATAAA	-21	NA	123170322	123160335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ES.34160.3	chr8	-	3103	9	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	183	junction_4	19.822651184945	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170158	123160339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123166263_123166376_123166492_123166920_123166992_123170032
ES.34160.4	chr8	-	1607	9	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	73.6324274691525	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170128	123160339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123160915_123161542_123161652_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ES.34160.5	chr8	-	2152	9	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	183	junction_4	23.2688095956798	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170128	123160339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166992_123170032
ES.34160.6	chr8	-	1981	11	NNC	ENSMUSG00000006517.6	novel	1833	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.083874809871	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170160	123160339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166571_123166798_123166920_123166992_123170032
ES.34160.7	chr8	-	2963	8	NIC	ENSMUSG00000006517.6	novel	1756	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	9	junction_2	74.3999122229019	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170134	123160339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123160915_123161542_123161652_123163748_123163968_123164153_123164229_123164565_123166263_123166376_123166492_123166920_123166992_123170032
ES.34161.1	chr8	+	1394	1	Intergenic	novelGene_27826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAACAATAAGT	NA	False	NA	NA	False	NA	NA	NA	123170409	123171803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123170400_123171800
ES.34161.2	chr8	+	2805	1	Antisense	novelGene_ENSMUSG00000110656.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATGGAACTGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	123170410	123173215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_123170400_123173200
ES.34162.1	chr8	-	828	1	Intergenic	novelGene_27827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAACTCCCAT	NA	False	NA	NA	False	AAAAAG	-9	NA	123171944	123171116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123171100_123171900
ES.34162.2	chr8	-	1636	6	Fusion	ENSMUSG00000110656.2_ENSMUSG00000006587.7	novel	1628	3	NA	NA	44	182	multi-exon	FALSE	canonical	0	0	junction_1	2.0591260281974	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTTATTTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	123187428	123171824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_123172381_123173732_123173829_123177904_123178032_123181673_123181774_123182861_123183468_123187277
ES.34162.3	chr8	-	1585	3	FSM	ENSMUSG00000006587.7	ENSMUST00000006762.7	1628	3	31	12	31	-12	multi-exon	FALSE	canonical	3	3	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTCCTGTCTTGAGCCT	NA	False	NA	NA	False	AATAAA	-15	NA	123187441	123180958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123181774_123182861_123183468_123187277
ES.34163.1	chr8	+	1179	1	Intergenic	novelGene_27828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4525	False	NA	NA	False	NA	NA	NA	123198544	123199723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123198500_123199700
ES.34163.2	chr8	+	2970	1	Intergenic	novelGene_27829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	4528	False	NA	NA	False	NA	NA	NA	123198547	123201517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123198500_123201500
ES.34164.1	chr8	-	5109	4	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	3657	-4	3281	4	intron_retention	TRUE	canonical	3	110	junction_3	8.49836585598798	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTGGTCCTGGGTTTT	NA	False	NA	-1	True	AATAAA	-21	NA	123199146	123192881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352
ES.34164.2	chr8	-	1823	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	-37	-3	-37	3	multi-exon	FALSE	canonical	3	110	junction_3	7.81280999384984	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCCTTGGTCCTGGGTTT	9944	False	NA	-2	True	AATAAA	-20	NA	123202840	123192882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ES.34164.3	chr8	-	1676	5	NIC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	-48	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	53.194807077383	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGCCTTGGTCCTGGGTT	9933	False	NA	-3	True	AATAAA	-19	NA	123202851	123192883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123202601
ES.34164.4	chr8	-	3263	5	NIC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	-6	1	intron_retention	FALSE	canonical	3	110	junction_3	8.68907359849138	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGAGCCTTGGTCCTGGGT	9975	False	NA	-4	True	AATAAA	-18	NA	123202809	123192884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123197096_123202601
ES.34164.5	chr8	-	1990	6	NIC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	48.2518393431794	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCGAGCCTTGGTCCTG	9990	False	NA	-7	True	AATAAA	-15	NA	123202794	123192887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202383
ES.34164.6	chr8	-	1777	6	NNC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.2302809446514	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGCGAGCCTTGGTCC	9956	False	NA	-9	True	AATAAA	-13	NA	123202828	123192889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196965_123197096_123202601
ES.34164.7	chr8	-	1757	6	NNC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	44	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	47.8355516326508	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGCGAGCCTTGGTCC	10001	False	NA	-9	True	AATAAA	-13	NA	123202759	123192889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195488_123196938_123197096_123202601
ES.34164.8	chr8	-	5420	5	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	1865	4	1489	-4	3prime_fragment	FALSE	canonical	3	110	junction_3	7.36545993132812	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGCGAGCCTTGGTCC	NA	False	NA	-9	True	AATAAA	-13	NA	123200938	123192889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938
ES.34164.9	chr8	-	447	1	NIC	ENSMUSG00000014470.5	novel	1783	6	NA	NA	18	-7591	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTCCACCCCATGTC	9999	False	NA	NA	False	AATAAA	-23	NA	123202785	123202338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123202300_123202800
ES.34165.1	chr8	+	1738	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	-21	1349	-21	0	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8841	False	NA	13	True	AATAAA	-15	NA	123202860	123208482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ES.34165.10	chr8	+	1786	14	NIC	ENSMUSG00000049482.17	novel	3999	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	8	junction_10	37.265082725422	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCTACAGTACTTG	8921	False	NA	11	True	AATAAA	-13	NA	123202940	123208480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
ES.34165.2	chr8	+	1829	14	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	5	0	intron_retention	FALSE	canonical	1	7	junction_10	37.5097620429764	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8867	False	NA	13	True	AATAAA	-15	NA	123202886	123208482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123207011_123207640_123207964_123208069_123208137_123208209_123208269_123208334
ES.34165.3	chr8	+	1699	15	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	15	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_4	48.7972167991878	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCTACAGTACTTG	8877	False	NA	11	True	AATAAA	-13	NA	123202896	123208480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123204000_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208359
ES.34165.4	chr8	+	2089	11	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	30	0	intron_retention	FALSE	canonical	3	114	junction_5	12.2886126149375	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAACCCTACAGTACTT	8892	False	NA	10	True	AATAAA	-12	NA	123202911	123208479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123206461_123206881_123206974_123207640_123207964_123208069_123208137_123208209
ES.34165.5	chr8	+	1898	13	NIC	ENSMUSG00000049482.17	novel	3999	15	NA	NA	31	0	intron_retention	FALSE	canonical	3	8	junction_9	35.5108551478746	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8893	False	NA	13	True	AATAAA	-15	NA	123202912	123208482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
ES.34165.6	chr8	+	1580	15	NNC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	37.3084222039332	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8909	False	NA	13	True	AATAAA	-15	NA	123202928	123208482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206062_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ES.34165.7	chr8	+	2002	13	NIC	ENSMUSG00000049482.17	novel	3999	15	NA	NA	-18	0	intron_retention	FALSE	canonical	3	8	junction_10	38.5539845181043	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCTACAGTACTTG	8910	False	NA	11	True	AATAAA	-13	NA	123202929	123208480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209
ES.34165.8	chr8	+	1806	13	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	-9	0	intron_retention	FALSE	canonical	3	114	junction_5	16.8093889108306	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACAGTACTTGTG	8919	False	NA	13	True	AATAAA	-15	NA	123202938	123208482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207964_123208069_123208137_123208209
ES.34165.9	chr8	+	1611	15	FSM	ENSMUSG00000049482.17	ENSMUST00000151855.8	3999	15	-9	2397	-9	0	multi-exon	FALSE	canonical	3	8	junction_11	35.9174222974004	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCTACAGTACTTG	8919	False	NA	11	True	AATAAA	-13	NA	123202938	123208480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207871_123207964_123208069_123208137_123208209_123208269_123208334
ES.34166.1	chr8	+	190	1	Intergenic	novelGene_27830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCTGGA	5706	False	NA	NA	False	NA	NA	NA	123218729	123218919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123218700_123218900
ES.34167.1	chr8	+	265	1	Intergenic	novelGene_27831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATGAATAAATCTG	993	False	NA	NA	False	NA	NA	NA	123255317	123255582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123255300_123255600
ES.34168.11	chr8	-	8169	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	30.4463856639832	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6116	False	NA	-16	True	AGTAAA	-20	NA	123278063	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225472_123226366_123226625_123226942_123227056_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.12	chr8	-	7119	39	NIC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	25	5	intron_retention	FALSE	canonical	3	60	junction_38	22.8676185432444	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	9618	False	NA	-16	True	AGTAAA	-20	NA	123226599	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366
ES.34168.13	chr8	-	8314	54	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	181	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_50	34.5282297143281	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6292	False	NA	-16	True	AGTAAA	-20	NA	123277887	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123255049_123255159_123255665_123255783_123262141_123262210_123277713
ES.34168.15	chr8	-	8224	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	28.2007092109401	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6115	False	NA	-16	True	AGTAAA	-20	NA	123278064	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214549_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.17	chr8	-	7284	46	NNC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	-2304	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_39	27.2473444169845	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	7289	False	NA	-16	True	AGTAAA	-20	NA	123228928	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225472_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860
ES.34168.18	chr8	-	5148	31	NNC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	2584	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	28.4201806233998	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGACTGTCACAGACCAAT	NA	False	NA	-17	True	AGTAAA	-19	NA	123222359	123208455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209980_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155
ES.34168.19	chr8	-	2437	12	NIC	ENSMUSG00000014444.18	novel	6317	40	NA	NA	-788	2	intron_retention	FALSE	canonical	3	102	junction_11	16.1547270670714	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	-19	True	AGTAAA	-17	NA	123213151	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123208971_123209048_123209266_123209387_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045
ES.34168.2	chr8	-	8765	48	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	4	7	intron_retention	FALSE	non_canonical	0	0	junction_11	30.8172081293142	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCACAGACCAATCCT	6115	False	NA	-14	True	AGTAAA	-22	NA	123278064	123208452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211860_123211995_123212211_123212328_123212477_123212562_123212698_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.21	chr8	-	8060	50	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	179	2	intron_retention	FALSE	canonical	0	0	junction_3	27.150252176597	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6290	False	NA	-19	True	AGTAAA	-17	NA	123277889	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209443_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.23	chr8	-	6903	31	NIC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	1342	2	intron_retention	FALSE	canonical	3	73	junction_25	20.7620380074361	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	-19	True	AGTAAA	-17	NA	123223601	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478
ES.34168.25	chr8	-	9356	48	NIC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	6	2	intron_retention	FALSE	canonical	3	43	junction_43	25.4780282408608	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6117	False	NA	-19	True	AGTAAA	-17	NA	123278062	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123223319_123223478_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.26	chr8	-	8677	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	7	2	intron_retention	FALSE	canonical	0	0	junction_48	34.8097687438455	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6118	False	NA	-19	True	AGTAAA	-17	NA	123278061	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216922_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123255049_123255159_123255665_123255783_123277713
ES.34168.27	chr8	-	3208	17	NNC	ENSMUSG00000014444.18	novel	6317	40	NA	NA	-2300	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8128465786304	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	-19	True	AGTAAA	-17	NA	123214663	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209086_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576
ES.34168.28	chr8	-	8251	52	NNC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	31.6625930725342	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6120	False	NA	-19	True	AGTAAA	-17	NA	123278059	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123222886_123222952_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229048_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.29	chr8	-	8181	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.2405653392142	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6116	False	NA	-19	True	AGTAAA	-17	NA	123278063	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210402_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.30	chr8	-	2601	14	NNC	ENSMUSG00000014444.18	novel	6317	40	NA	NA	-1448	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.3527879713251	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	-19	True	AGTAAA	-17	NA	123213811	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211991_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748
ES.34168.31	chr8	-	8183	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	7	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	30.2228787510389	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	6118	False	NA	-19	True	AGTAAA	-17	NA	123278061	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209391_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217597_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.32	chr8	-	3415	20	NNC	ENSMUSG00000014444.18	novel	6317	40	NA	NA	-3507	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.692117803976	209	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGACTGTCACAGACCA	NA	False	NA	-19	True	AGTAAA	-17	NA	123215870	123208457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211991_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213630_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837
ES.34168.34	chr8	-	7004	36	NNC	ENSMUSG00000014444.18	novel	8216	51	NA	NA	222	1	intron_retention	FALSE	canonical	0	0	junction_31	31.8289561402757	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGGACTGTCACAGACC	NA	False	NA	-20	True	AGTAAA	-16	NA	123224721	123208458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123222886_123222952_123223141_123223319_123223478_123223640_123224190_123224304_123224544
ES.34168.38	chr8	-	3296	1	Intergenic	novelGene_27832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAACAGGGACTGGAG	8638	False	NA	NA	False	NA	NA	NA	123275541	123272245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123272200_123275500
ES.34168.6	chr8	-	4119	5	NIC	ENSMUSG00000014444.18	novel	6317	40	NA	NA	-857	5	intron_retention	FALSE	canonical	3	102	junction_4	17.4409718765899	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	NA	False	NA	-16	True	AGTAAA	-20	NA	123213220	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123209266_123209387_123209969_123210057_123212477_123212562_123212696_123213045
ES.34168.7	chr8	-	7937	50	NIC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	192	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	28.2026934889794	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6303	False	NA	-16	True	AGTAAA	-20	NA	123277876	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34168.9	chr8	-	8167	51	NNC	ENSMUSG00000014444.18	novel	8219	51	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	27.9711923235317	218	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTGTCACAGACCAATC	6115	False	NA	-16	True	AGTAAA	-20	NA	123278064	123208454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213653_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ES.34169.1	chr8	-	176	1	Intergenic	novelGene_27833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	123285501	123285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123285300_123285500
ES.3417.1	chr10	+	2618	5	NNC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	-23	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5067555233217	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATATTATCAAATCCT	NA	False	NA	NA	False	AATAAA	-20	NA	81883933	81897424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81884064_81889296_81889523_81894203_81894331_81894516_81894578_81895350
ES.3417.10	chr10	+	3088	5	NIC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	2	406	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	14.0423466699836	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATCCCTGTGTGTTCA	NA	False	NA	NA	False	AAAAAG	-40	NA	81883958	81900985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897183_81900022
ES.3417.11	chr10	+	5522	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	2	-3164	2	0	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81883958	81900579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ES.3417.12	chr10	+	3804	2	NNC	ENSMUSG00000061371.8	novel	1647	2	NA	NA	-150	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81895942	81900579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81897633_81898465
ES.3417.13	chr10	+	3259	1	Genic_Genomic	ENSMUSG00000061371.8	novel	NA	NA	NA	NA	3468	2240	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81899560	81902819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81899600_81902800
ES.3417.2	chr10	+	2384	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-20	-4	-20	1	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTATCTATATTATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	81883936	81897419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ES.3417.3	chr10	+	2698	5	NIC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	14.0423466699836	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81883942	81900579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897183_81900022
ES.3417.4	chr10	+	2511	5	NNC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.2018517460196	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81883946	81900579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897000_81900022
ES.3417.5	chr10	+	4471	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-10	-2101	-10	-1063	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAACAAGTTCACAAT	NA	False	NA	NA	False	AATAAA	-15	NA	81883946	81899516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ES.3417.6	chr10	+	2308	3	FSM	ENSMUSG00000061371.8	ENSMUST00000209622.2	2284	3	-25	1	-5	1	multi-exon	FALSE	canonical	1	2	junction_2	19	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTATCTATATTATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	81883951	81897419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81895350
ES.3417.7	chr10	+	5939	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-4	-3575	-4	411	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTGTGTTCATTCTT	NA	False	NA	NA	False	AAAAAG	-45	NA	81883952	81900990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ES.3417.8	chr10	+	6565	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	-1	-4204	-1	1040	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTCTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	81883955	81901619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ES.3417.9	chr10	+	3060	5	NNC	ENSMUSG00000061371.8	novel	2360	4	NA	NA	2	13880	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.6339261751398	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACCGTGTGTTCTAAGG	NA	False	NA	NA	False	AATAAA	-13	NA	81883958	81914459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350_81897000_81913341
ES.34170.1	chr8	-	200	1	Intergenic	novelGene_27834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	123286624	123286424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123286400_123286600
ES.34171.1	chr8	-	152	1	Intergenic	novelGene_27835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAGTGAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	123287786	123287634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123287600_123287800
ES.34172.1	chr8	+	203	1	Intergenic	novelGene_27836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGTAAAGAAAAGAAA	9376	False	NA	NA	False	NA	NA	NA	123290352	123290555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123290400_123290600
ES.34173.1	chr8	-	1550	1	Intergenic	novelGene_27837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	123294604	123293054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123293100_123294600
ES.34174.1	chr8	+	2281	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	-65	-27	-65	27	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATGCTGTTGTGTGAT	2521	False	NA	54	True	AATAAA	-42	NA	123294688	123299894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.10	chr8	+	3112	8	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-4	8	intron_retention	FALSE	canonical	0	0	junction_3	351.807925332177	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCACCGTAAAATCTCT	2582	False	NA	35	True	AATAAA	-44	NA	123294749	123299875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123296215_123296642_123296841_123296932_123297079_123297161_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.11	chr8	+	3004	9	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	2	2	intron_retention	FALSE	canonical	3	858	junction_1	66.3059904910559	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACCTGTCACCGTAAA	2588	False	NA	29	True	AATAAA	-38	NA	123294755	123299869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.13	chr8	+	3427	6	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	858	junction_2	64.2071647092441	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2598	False	NA	27	True	AATAAA	-36	NA	123294765	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123298169_123298434_123298588_123298675
ES.34174.14	chr8	+	2293	9	NNC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_3	320.673680514943	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGAACCTGTCACCG	2599	False	NA	25	True	AATAAA	-34	NA	123294766	123299865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296615_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.15	chr8	+	4150	3	NIC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	2	17	intron_retention	FALSE	canonical	3	944	junction_2	31	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCTCTTTAAATGCT	2599	False	NA	44	True	AATAAA	-32	NA	123294766	123299884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123297278_123297979_123298169_123298434
ES.34174.16	chr8	+	2140	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	309.802804664157	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGAACCTGTCACCG	2607	False	NA	25	True	AATAAA	-34	NA	123294774	123299865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298562_123298675_123298878_123299232
ES.34174.17	chr8	+	2163	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	309.998566304928	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2607	False	NA	27	True	AATAAA	-36	NA	123294774	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298173_123298443_123298588_123298675_123298878_123299232
ES.34174.19	chr8	+	2953	8	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	10	2	intron_retention	FALSE	canonical	3	858	junction_2	43.373555377931	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACCTGTCACCGTAAA	2607	False	NA	29	True	AATAAA	-38	NA	123294774	123299869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123295825_123295985_123296062_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675
ES.34174.2	chr8	+	2327	9	FSM	ENSMUSG00000006585.4	ENSMUST00000212967.2	2696	9	-44	413	-33	13	multi-exon	FALSE	canonical	3	858	junction_2	70.7626976238187	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGTAAAATCTCTTTAAA	2553	False	NA	40	True	AATAAA	-28	NA	123294720	123299880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.20	chr8	+	4215	4	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	10	4	intron_retention	FALSE	canonical	3	948	junction_1	26.8824602048746	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCTGTCACCGTAAAAT	2607	False	NA	31	True	AATAAA	-40	NA	123294774	123299871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123296841_123296932_123297278_123297979_123298588_123298675
ES.34174.21	chr8	+	3175	7	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	858	junction_1	73.0083709051381	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2608	False	NA	27	True	AATAAA	-36	NA	123294775	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.22	chr8	+	2008	9	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	324.709846439864	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2608	False	NA	27	True	AATAAA	-36	NA	123294775	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.23	chr8	+	2714	7	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	858	junction_2	63.7390513474014	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2609	False	NA	27	True	AATAAA	-36	NA	123294776	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123297278_123297979_123298169_123298434_123298588_123298675
ES.34174.24	chr8	+	2154	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	309.802804664157	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2609	False	NA	27	True	AATAAA	-36	NA	123294776	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298687_123298878_123299232
ES.34174.25	chr8	+	2594	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	23	-428	12	2	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTCTCTGATCATGAA	2609	False	NA	NA	False	NA	NA	NA	123294776	123300295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.26	chr8	+	2049	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	309.869665950934	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2613	False	NA	27	True	AATAAA	-36	NA	123294780	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296728_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.27	chr8	+	5026	2	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2613	False	NA	27	True	AATAAA	-36	NA	123294780	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123297810_123297870
ES.34174.29	chr8	+	2521	9	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	27	-4	16	4	intron_retention	FALSE	canonical	3	858	junction_2	55.805325686712	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCTGTCACCGTAAAAT	2613	False	NA	31	True	AATAAA	-40	NA	123294780	123299871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675
ES.34174.3	chr8	+	2297	9	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-25	5	intron_retention	FALSE	canonical	3	894	junction_1	59.4441702356085	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGTCACCGTAAAATC	2561	False	NA	32	True	AATAAA	-41	NA	123294728	123299872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123295825_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.30	chr8	+	3621	5	NIC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	16	8	intron_retention	FALSE	canonical	3	858	junction_1	71.5122367151245	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCACCGTAAAATCTCT	2613	False	NA	35	True	AATAAA	-44	NA	123294780	123299875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123297278_123297979_123298169_123298434
ES.34174.31	chr8	+	3336	8	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	16	4	intron_retention	FALSE	canonical	3	858	junction_1	55.7402869730389	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCTGTCACCGTAAAAT	2613	False	NA	31	True	AATAAA	-40	NA	123294780	123299871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675
ES.34174.32	chr8	+	2154	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	309.998566304928	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2613	False	NA	27	True	AATAAA	-36	NA	123294780	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298161_123298434_123298588_123298675_123298878_123299232
ES.34174.33	chr8	+	2159	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	302.112234888188	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGTCACCGTAAAATC	2615	False	NA	32	True	AATAAA	-41	NA	123294782	123299872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298872_123299232
ES.34174.35	chr8	+	3497	6	NIC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	33	2	intron_retention	FALSE	canonical	3	858	junction_1	65.8373754033376	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACCTGTCACCGTAAA	2630	False	NA	29	True	AATAAA	-38	NA	123294797	123299869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434
ES.34174.36	chr8	+	3672	4	NIC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	377	2	intron_retention	FALSE	canonical	3	944	junction_2	27.9205221218292	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACCTGTCACCGTAAA	2974	False	NA	29	True	AATAAA	-38	NA	123295141	123299869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123297278_123297979_123298169_123298434_123298588_123298675
ES.34174.37	chr8	+	329	1	Intergenic	novelGene_27838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATTGAGCT	3070	False	NA	NA	False	NA	NA	NA	123295237	123295566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123295200_123295600
ES.34174.38	chr8	+	843	2	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3921	-5	144	5	3prime_fragment	FALSE	canonical	3	1078	junction_1	0	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGTCACCGTAAAATC	6507	False	NA	32	True	AATAAA	-41	NA	123298674	123299872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123298878_123299232
ES.34174.4	chr8	+	3118	8	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-22	0	intron_retention	FALSE	canonical	3	858	junction_1	70.3434722034152	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2564	False	NA	27	True	AATAAA	-36	NA	123294731	123299867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.5	chr8	+	3110	8	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-22	6	intron_retention	FALSE	canonical	3	925	junction_3	54.6831317497378	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGTCACCGTAAAATCT	2564	False	NA	33	True	AATAAA	-42	NA	123294731	123299873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.6	chr8	+	2432	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-21	6	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_9	299.018063784006	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGTCACCGTAAAATCT	2565	False	NA	33	True	AATAAA	-42	NA	123294732	123299873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299016
ES.34174.7	chr8	+	2366	8	NIC	ENSMUSG00000006585.4	novel	2696	9	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	894	junction_1	62.6656173019682	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGCTGAACCTGTCACC	2576	False	NA	24	True	AATAAA	-33	NA	123294743	123299864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123295011_123295825_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.8	chr8	+	3194	7	NIC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-7	4	intron_retention	FALSE	canonical	3	944	junction_4	52.6803779620289	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCTGTCACCGTAAAAT	2579	False	NA	31	True	AATAAA	-40	NA	123294746	123299871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123296215_123296642_123296841_123296932_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34174.9	chr8	+	2192	10	NNC	ENSMUSG00000006585.4	novel	2189	10	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	309.869665950934	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGTCACCGTAAAATCT	2582	False	NA	33	True	AATAAA	-42	NA	123294749	123299873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296845_123296943_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ES.34175.1	chr8	-	326	2	Antisense	novelGene_ENSMUSG00000006585.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTAGTTCCCGCGGA	NA	False	NA	NA	False	NA	NA	NA	123295929	123294788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_123295010_123295824
ES.34176.1	chr8	-	1052	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-11	-192	8	190	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCTAGGCTGTTATTC	NA	False	NA	NA	False	CATAAA	-16	NA	123303640	123301183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ES.34176.10	chr8	-	3186	19	Fusion	ENSMUSG00000015027.12_ENSMUSG00000006589.9	novel	2557	14	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_4	438.840545860747	261	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTGCTTCTCCTCAG	NA	False	NA	-10	True	AATAAA	-12	NA	123338132	123301378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123304251_123304474_123305607_123305937_123307789_123307908_123311592_123311773_123318176_123318280_123318939_123319019_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.12	chr8	-	942	6	FSM	ENSMUSG00000006589.9	ENSMUST00000213030.2	660	6	-34	-248	1	-3	multi-exon	FALSE	canonical	0	0	junction_4	634.519030447472	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTGCTTCTCCTCAG	NA	False	NA	-10	True	AATAAA	-12	NA	123303591	123301378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302992_123303253_123303361_123303491
ES.34176.13	chr8	-	2505	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	59	-7	0	7	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTTGTTTGTTTGT	NA	False	NA	3	True	NA	NA	NA	123338143	123304973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.15	chr8	-	2523	14	NNC	ENSMUSG00000015027.12	novel	2557	14	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.4312476818703	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGTCTTTTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	123338141	123304977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123325987_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.16	chr8	-	2960	15	NNC	ENSMUSG00000015027.12	novel	2557	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.4972984902646	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTATCCTGGTCTTTTGT	NA	False	NA	-5	True	NA	NA	NA	123338141	123304981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123305937_123307789_123307908_123311592_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123327518_123327926_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.17	chr8	-	2248	12	FSM	ENSMUSG00000015027.12	ENSMUST00000212319.2	2111	12	5	-142	5	-5	multi-exon	FALSE	canonical	0	0	junction_3	6.65191204724608	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACCTATCCTGGTCTT	NA	False	NA	-9	True	NA	NA	NA	123338138	123304985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.18	chr8	-	2330	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	62	165	3	-18	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTAGCCCCAAGTCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	123338140	123305145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.19	chr8	-	4541	12	ISM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	61	3551	2	-2855	5prime_fragment	FALSE	canonical	3	11	junction_8	4.39571541954058	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGCCACCATGTTCC	NA	False	NA	NA	False	NA	NA	NA	123338141	123308531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ES.34176.20	chr8	-	3965	1	NIC	ENSMUSG00000015027.12	novel	2557	14	NA	NA	-4679	-2855	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGCCACCATGTTCC	6070	False	NA	NA	False	NA	NA	NA	123312496	123308531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123308500_123312500
ES.34176.22	chr8	-	176	1	Intergenic	novelGene_27839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	123332993	123332817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123332800_123333000
ES.34176.3	chr8	-	883	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	-29	-5	-10	3	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCTCAGTTTGTTGC	NA	False	NA	-2	True	AATAAA	-20	NA	123303658	123301370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ES.34176.6	chr8	-	968	6	NIC	ENSMUSG00000006589.9	novel	660	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	634.519030447472	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	-7	True	AATAAA	-15	NA	123303635	123301375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302971_123303253_123303361_123303491
ES.34176.7	chr8	-	4703	16	Fusion	ENSMUSG00000015027.12_ENSMUSG00000006589.9	novel	2557	14	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	474.84002452288	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	-7	True	AATAAA	-15	NA	123338141	123301375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123337966
ES.34176.9	chr8	-	1266	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	-59	-278	-3	-1	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCTTCTCCTCAGTT	NA	False	NA	-8	True	AATAAA	-14	NA	123303651	123301376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
ES.34177.1	chr8	+	909	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-17	-1072	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTACGTTGTCCTGTGT	5499	False	NA	23	True	ACTAAA	-15	NA	123338361	123342327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
ES.34177.2	chr8	+	602	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	-13	1070	-7	-1070	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGTTGTCCTGTGTCA	5509	False	NA	25	True	ACTAAA	-17	NA	123338371	123342329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
ES.34177.3	chr8	+	501	4	NNC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	-6	-1080	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	269.043986490437	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATGAGATCTACGTTG	5510	False	NA	15	True	ACTAAA	-7	NA	123338372	123342319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123338433_123339804_123339976_123341046_123341127_123342129
ES.34178.1	chr8	-	177	1	Intergenic	novelGene_27840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123343901	123343724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123343700_123343900
ES.34179.1	chr8	-	3779	11	NIC	ENSMUSG00000006362.17	novel	7645	12	NA	NA	-261	273	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	0.916515138991168	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAAAGCCAGCAGCCACC	6520	False	NA	NA	False	NA	NA	NA	123426109	123355928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123357716_123360056_123360248_123361098_123361168_123361687_123361887_123362492_123362579_123364732_123364963_123365595_123365778_123369702_123369793_123370030_123370273_123377068_123377216_123425553
ES.34179.2	chr8	-	2597	7	ISM	ENSMUSG00000006362.17	ENSMUST00000064674.13	2867	12	-357	7099	162	1977	5prime_fragment	FALSE	canonical	0	0	junction_5	1	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCAGCCTCTATTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	123405271	123363775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123364963_123365595_123365778_123369702_123369793_123370030_123370273_123374439_123374518_123377068_123377216_123404600
ES.3418.1	chr10	-	130	1	Intergenic	novelGene_2635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81897711	81897581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81897600_81897700
ES.34180.1	chr8	+	2515	9	ISM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-96	3472	-4	-18	5prime_fragment	FALSE	canonical	3	16	junction_1	7.75302360373035	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGCTTGCCCCAT	9511	False	NA	NA	False	NA	NA	NA	123502220	123541147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ES.34180.2	chr8	+	2223	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	-11	-6	8	6	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGAGCTGTGAGTCTG	9523	False	NA	19	True	AATAAA	-31	NA	123502232	123544625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ES.34180.3	chr8	+	2335	8	NIC	ENSMUSG00000015016.9	novel	2604	10	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	14.5644240867805	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGACTCCAGTT	9530	False	NA	NA	False	NA	NA	NA	123502239	123541170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ES.34180.4	chr8	+	2242	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	-73	2	0	-2	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGACCTGTGAGCTG	9534	False	NA	11	True	AATAAA	-23	NA	123502243	123544617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ES.34180.5	chr8	+	2472	9	ISM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	3454	0	0	5prime_fragment	FALSE	canonical	2	11	junction_1	9.16174110090435	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTTGTGGTAGACTC	9534	False	NA	NA	False	NA	NA	NA	123502243	123541165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ES.34180.6	chr8	+	2130	9	NNC	ENSMUSG00000015016.9	novel	2206	10	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.1245154965971	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCTGTGAGCTGTGAG	9534	False	NA	15	True	AATAAA	-27	NA	123502243	123544621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512561_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123544130
ES.34181.1	chr8	+	159	1	Intergenic	novelGene_27841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123570659	123570818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123570700_123570800
ES.34182.1	chr8	+	178	1	Intergenic	novelGene_27842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCACTCGTGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	123571744	123571922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123571700_123571900
ES.34183.1	chr8	+	2879	14	FSM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	366	6	366	-6	multi-exon	TRUE	canonical	0	0	junction_2	0.266469355010597	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCACAGGTGCCCAGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	123575070	123594130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ES.34184.1	chr8	-	178	1	Intergenic	novelGene_27843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTGATCATGGT	NA	False	NA	NA	False	NA	NA	NA	123583672	123583494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123583500_123583700
ES.34185.1	chr8	-	158	1	Intergenic	novelGene_27844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCATTCAATGGG	NA	False	NA	-1	True	NA	NA	NA	123585218	123585060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123585100_123585200
ES.34186.1	chr8	+	2997	3	NNC	ENSMUSG00000110440.2	novel	1097	2	NA	NA	35	3764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGAGCCTTCGTATCA	NA	False	NA	NA	False	TATAAA	-12	NA	123597322	123631960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123597547_123627358_123629524_123631352
ES.34186.2	chr8	+	1060	2	FSM	ENSMUSG00000110440.2	ENSMUST00000212728.2	1097	2	37	0	37	0	multi-exon	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAAAATTAAT	NA	False	NA	NA	False	TATAAA	-7	NA	123597324	123628196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123597547_123627358
ES.34186.3	chr8	+	7073	4	NNC	ENSMUSG00000110440.2	novel	1097	2	NA	NA	37	7960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACATAAAACTCGCAGC	NA	False	NA	NA	False	AAAAAG	-16	NA	123597324	123636156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123597547_123627358_123629524_123631352_123632702_123632819
ES.34186.4	chr8	+	5920	5	NNC	ENSMUSG00000110440.2	novel	1097	2	NA	NA	38	488	intron_retention	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGGCCACATACTTGT	NA	False	NA	NA	False	NA	NA	NA	123597325	123628684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123597547_123617981_123618093_123618458_123618547_123622725_123626900_123627358
ES.34186.5	chr8	+	167	1	Intergenic	novelGene_27846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTACAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123605208	123605375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123605200_123605400
ES.34186.6	chr8	+	4818	1	Genic_Genomic	ENSMUSG00000110440.2	novel	NA	NA	NA	NA	21273	749	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTGTCTCTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	123618560	123623378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_123618600_123623400
ES.34187.1	chr8	+	5126	1	Intergenic	novelGene_27847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAGAATACAAACAAA	7329	False	NA	NA	False	NA	NA	NA	123661234	123666360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123661200_123666400
ES.34188.1	chr8	+	142	1	Intergenic	novelGene_27848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123750225	123750367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123750200_123750400
ES.34189.1	chr8	+	7167	1	Intergenic	novelGene_27850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTGTAAGTGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	123751977	123759144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123752000_123759100
ES.3419.1	chr10	+	2782	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-57	1	-57	-1	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATATACTGCCATCCA	NA	False	NA	NA	False	AATAAA	-18	NA	81919129	81947049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ES.3419.2	chr10	+	6414	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-53	-3635	-53	3635	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTGTGGTCATGTC	NA	False	NA	NA	False	AAGAAA	-17	NA	81919133	81950685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ES.3419.3	chr10	+	4042	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-33	-1283	-33	1283	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCTGGAGTGGAGTTAC	NA	False	NA	NA	False	AATAAA	-27	NA	81919153	81948333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ES.3419.4	chr10	+	2455	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	-30	301	-30	-301	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCTTGAAACACATCCC	NA	False	NA	NA	False	NA	NA	NA	81919156	81946749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ES.3419.5	chr10	+	4182	1	Genic_Genomic	ENSMUSG00000112160.2	novel	NA	NA	NA	NA	25554	1872	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATATTGAATATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	81944740	81948922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_81944700_81948900
ES.3419.6	chr10	+	9054	1	Intergenic	novelGene_2637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGCCCTTGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	81948553	81957607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81948600_81957600
ES.3419.7	chr10	+	4181	1	Intergenic	novelGene_2638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTTTCCTTGCCTTC	NA	False	NA	8	True	NA	NA	NA	81954577	81958758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_81954600_81958800
ES.34190.1	chr8	+	2368	3	Intergenic	novelGene_27851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTGCTTAAA	9158	False	NA	NA	False	NA	NA	NA	123763504	123805196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123765705_123803077_123803156_123805106
ES.34190.10	chr8	+	3634	16	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	14	junction_1	84.2756324344245	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAGCTCTCCATGT	NA	False	NA	11	True	AGTAAA	-11	NA	123792237	123824490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.11	chr8	+	2491	16	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	67.5203343856912	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792237	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123824132
ES.34190.12	chr8	+	6073	13	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-9	0	intron_retention	FALSE	canonical	3	221	junction_3	22.4132587248411	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792237	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.13	chr8	+	2641	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	87.2904410216262	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792238	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821188_123821380_123821896_123821975_123824132
ES.34190.14	chr8	+	2823	19	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	103.16624783018	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792238	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123810560_123810683_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.15	chr8	+	2541	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.5844154063096	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792238	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803616_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.16	chr8	+	4730	16	ISM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	321	3	-8	2	intron_retention	FALSE	canonical	3	204	junction_8	28.1374404584986	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCCATGTGTATTG	NA	False	NA	17	True	AGTAAA	-17	NA	123792238	123824496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896
ES.34190.17	chr8	+	3504	15	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	221	junction_3	21.8156702713383	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792238	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.18	chr8	+	5332	6	ISM	ENSMUSG00000000738.19	ENSMUST00000153285.9	2481	16	24	15389	-8	2377	intron_retention	FALSE	canonical	3	221	junction_3	25.3740024434459	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCATGGTTTTGTTTTT	NA	False	NA	NA	False	TATAAA	-13	NA	123792238	123809103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556
ES.34190.19	chr8	+	2904	9	ISM	ENSMUSG00000000738.19	ENSMUST00000153285.9	2481	16	29	15385	-3	2381	5prime_fragment	FALSE	canonical	3	204	junction_8	29.1673511824437	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGTTTTGTTTTTGTTT	NA	False	NA	NA	False	TATAAA	-17	NA	123792243	123809107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375
ES.34190.2	chr8	+	1372	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	40	725	40	-725	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTG	NA	False	NA	NA	False	ACTAAA	-18	NA	123769244	123770616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123769200_123770600
ES.34190.20	chr8	+	2988	16	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	2	1	intron_retention	FALSE	canonical	3	204	junction_7	25.4334862380725	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTCTCCATGTGTA	NA	False	NA	14	True	AGTAAA	-14	NA	123792248	123824493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.21	chr8	+	5281	12	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	76.2237896965408	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792248	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123807550_123814066_123814192_123815683_123816974_123818373_123818490_123820329_123821975_123824132
ES.34190.22	chr8	+	3034	16	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	2	0	intron_retention	FALSE	canonical	2	6	junction_10	67.7411412822535	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAGCTCTCCATGT	NA	False	NA	11	True	AGTAAA	-11	NA	123792248	123824490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.23	chr8	+	2463	16	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.4097655633237	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGAGCTCTCCATGTG	NA	False	NA	12	True	AGTAAA	-12	NA	123792249	123824491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123800490_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.24	chr8	+	3554	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_8	98.393641022934	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGAGCTCTCCATGTG	NA	False	NA	12	True	AGTAAA	-12	NA	123792249	123824491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806347_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.27	chr8	+	4252	14	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	221	junction_2	21.5661909412853	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792251	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.28	chr8	+	2664	17	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	65.7855179731831	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792251	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821489_123821896_123821975_123824132
ES.34190.29	chr8	+	4575	14	NNC	ENSMUSG00000000738.19	novel	2481	16	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	72.7033365666872	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792251	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800740_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.3	chr8	+	2006	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	124	7	124	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACTCATGTTTTACC	NA	False	NA	2	True	NA	NA	NA	123769328	123771334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123769300_123771300
ES.34190.30	chr8	+	2682	18	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.528238851477	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792251	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797118_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806480_123806642_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.32	chr8	+	2601	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	84.0122758887057	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792251	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800490_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.33	chr8	+	4984	14	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	5	0	intron_retention	FALSE	canonical	3	221	junction_3	22.5920863769574	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792251	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.36	chr8	+	2698	18	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	85.7023092638045	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAGCTCTCCATGT	NA	False	NA	11	True	AGTAAA	-11	NA	123792259	123824490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123822511_123822665_123824132
ES.34190.37	chr8	+	2705	17	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	85.914906120824	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792259	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821489_123821896_123821975_123824132
ES.34190.38	chr8	+	3425	19	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	13	1740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	92.7944263172932	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTCTTCTTAGCCCT	NA	False	NA	NA	False	NA	NA	NA	123792259	123826239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132_123824916_123825917
ES.34190.4	chr8	+	663	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	143	1331	143	-1331	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGTTGGTATAGGCTT	NA	False	NA	NA	False	CATAAA	-17	NA	123769347	123770010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123769300_123770000
ES.34190.40	chr8	+	4043	16	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_8	87.4885135317774	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792259	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800490_123800730_123803589_123803730_123804556_123806279_123806707_123806871_123807375_123807554_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.41	chr8	+	3837	15	NIC	ENSMUSG00000000738.19	novel	2481	16	NA	NA	15	0	intron_retention	FALSE	canonical	2	6	junction_11	68.3028968220654	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792261	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123821975_123824132
ES.34190.42	chr8	+	3513	15	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	16	-2	intron_retention	FALSE	canonical	1	1	junction_5	71.6488033424716	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTTGAGCTCTCCAT	NA	False	NA	9	True	AGTAAA	-9	NA	123792262	123824488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.43	chr8	+	3497	16	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	182	2	intron_retention	FALSE	canonical	0	0	junction_4	115.687510129659	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTCCATGTGTATTG	NA	False	NA	17	True	AGTAAA	-17	NA	123792428	123824496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800740_123803589_123803730_123804556_123804660_123806152_123807550_123810560_123810683_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.44	chr8	+	2760	17	NNC	ENSMUSG00000000738.19	novel	1080	8	NA	NA	260	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.800643876893	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	False	NA	13	True	AGTAAA	-13	NA	123792506	123824492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792839_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807354_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.45	chr8	+	3693	16	NNC	ENSMUSG00000000738.19	novel	1080	8	NA	NA	263	-1	intron_retention	FALSE	canonical	0	0	junction_1	104.687768573453	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATTTGAGCTCTCCATG	NA	False	NA	10	True	AGTAAA	-10	NA	123792509	123824489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123792792_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123810560_123810683_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.5	chr8	+	444	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	183	1510	183	-1510	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCGTTAGTAGTGATTT	NA	False	NA	NA	False	AAAAAG	-11	NA	123769387	123769831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123769400_123769800
ES.34190.6	chr8	+	711	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	202	1224	202	-1224	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATATAAAATAACAA	NA	False	NA	NA	False	NA	NA	NA	123769406	123770117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123769400_123770100
ES.34190.7	chr8	+	3564	15	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	10	1	intron_retention	FALSE	canonical	2	6	junction_9	69.3649031998054	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGAGCTCTCCATGTG	NA	False	NA	12	True	AGTAAA	-12	NA	123792224	123824491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816813_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.8	chr8	+	2574	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	317	5	-12	0	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792234	123824494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34190.9	chr8	+	5251	14	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	204	junction_5	26.1332498086658	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTTGAGCTCTCCAT	NA	False	NA	9	True	AGTAAA	-9	NA	123792236	123824488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ES.34191.1	chr8	-	9483	14	NNC	ENSMUSG00000035569.18	novel	4257	6	NA	NA	4	14226	intron_retention	TRUE	canonical	0	0	junction_1	123.483175674082	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTTTCTTTTTCCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	123769012	123596334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123597528_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.10	chr8	-	8146	7	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	1069	496	intron_retention	FALSE	canonical	0	0	junction_2	149.129045535141	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACTGTCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	123625450	123610064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612473_123614048_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312
ES.34191.11	chr8	-	9083	12	NIC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-20	496	intron_retention	FALSE	canonical	0	0	junction_10	123.982603418436	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACTGTCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	123769036	123610064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123701467_123701532_123768687
ES.34191.12	chr8	-	3137	14	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	2	495	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	119.088202606304	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123769014	123610065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123622542_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.13	chr8	-	8801	12	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	23	495	intron_retention	FALSE	non_canonical	0	0	junction_2	138.959652863581	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCACTGTCCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	123642703	123610065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614048_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627423_123635424_123635546_123642639
ES.34191.17	chr8	-	3454	9	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-1464	489	intron_retention	FALSE	canonical	3	9	junction_4	124.80328270923	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123627983	123610071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123622542_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717
ES.34191.18	chr8	-	7642	2	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	23700	-818	7493	489	intron_retention	FALSE	canonical	3	382	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123619026	123610071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123611076_123612388
ES.34191.19	chr8	-	3089	13	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-53	489	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	107.656346254593	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123769069	123610071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123622542_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.2	chr8	-	200	1	Intergenic	novelGene_27845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123603256	123603056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123603100_123603300
ES.34191.21	chr8	-	8991	3	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	5310	488	intron_retention	FALSE	non_canonical	0	0	junction_1	205	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTACATGGCACTGTC	NA	False	NA	NA	False	NA	NA	NA	123621209	123610072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123613448_123613581_123614366_123616377
ES.34191.22	chr8	-	4236	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	25464	-817	9257	488	intron_retention	FALSE	canonical	3	382	junction_1	6.18241233033047	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTACATGGCACTGTC	NA	False	NA	NA	False	NA	NA	NA	123617262	123610072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266
ES.34191.23	chr8	-	9328	14	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-75	487	intron_retention	FALSE	canonical	0	0	junction_12	131.189595849563	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTACATGGCACTGT	NA	False	NA	NA	False	NA	NA	NA	123769091	123610073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123706201_123706256_123768687
ES.34191.24	chr8	-	9158	13	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	8	487	intron_retention	FALSE	canonical	0	0	junction_5	117.978193606559	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTACATGGCACTGT	NA	False	NA	NA	False	NA	NA	NA	123769008	123610073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623331_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.25	chr8	-	6377	4	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	5171	485	intron_retention	FALSE	canonical	3	382	junction_1	11.4697670227235	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123621348	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614366_123616377
ES.34191.26	chr8	-	7077	4	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	5972	485	intron_retention	FALSE	canonical	3	382	junction_1	11.4309521329882	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123620547	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123614197_123614266_123614366_123616377
ES.34191.28	chr8	-	9125	14	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	25	485	intron_retention	FALSE	canonical	0	0	junction_1	114.79949075202	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123768991	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123610274_123610320_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.29	chr8	-	9202	13	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	28	485	intron_retention	FALSE	canonical	0	0	junction_12	134.928273126461	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123768988	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123768687
ES.34191.3	chr8	-	9282	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-324	-503	-67	503	multi-exon	FALSE	canonical	3	162	junction_12	93.1657349386923	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCTTCAGGTAGCCGG	NA	False	NA	NA	False	NA	NA	NA	123769083	123610057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.30	chr8	-	9022	13	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	20170	485	intron_retention	FALSE	canonical	0	0	junction_12	134.928273126461	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123681342	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123681221
ES.34191.31	chr8	-	2993	2	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	9804	485	intron_retention	FALSE	non_canonical	0	0	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	False	NA	NA	False	NA	NA	NA	123616715	123610075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123610604_123614250
ES.34191.33	chr8	-	7167	5	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	4888	460	intron_retention	FALSE	canonical	0	0	junction_2	171.758551461055	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123621631	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123613084_123614052_123614197_123614266_123614366_123616377
ES.34191.34	chr8	-	9160	13	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	25	460	intron_retention	FALSE	canonical	1	1	junction_7	119.294686479416	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123768991	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625469_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.35	chr8	-	9367	13	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	27	460	intron_retention	FALSE	canonical	0	0	junction_12	116.592684876311	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123768989	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768465
ES.34191.36	chr8	-	9366	14	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-69	460	intron_retention	FALSE	canonical	2	2	junction_5	131.371734191106	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123769085	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623076_123623202_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.37	chr8	-	5885	13	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-15	460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	112.840687845003	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123769031	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123619677_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.38	chr8	-	9595	12	NIC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-20	460	intron_retention	FALSE	canonical	3	162	junction_11	93.6660147227883	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123769036	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.39	chr8	-	9431	14	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	27	460	intron_retention	FALSE	canonical	1	3	junction_10	120.887350369217	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123768989	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627627_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.4	chr8	-	9369	14	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-59	501	intron_retention	FALSE	canonical	3	57	junction_10	113.267448072689	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCCTTCAGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	123769075	123610059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.40	chr8	-	9072	12	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-12	460	intron_retention	FALSE	canonical	0	0	junction_11	140.710828261661	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	123769028	123610100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123768687
ES.34191.41	chr8	-	6543	1	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-638	1811	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATAAAGACATACACAGCA	NA	False	NA	29	True	AAGAAA	-15	NA	123627157	123620614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123620600_123627200
ES.34191.42	chr8	-	2903	8	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	-52	5	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	74.1537289028953	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123769068	123623753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.43	chr8	-	2765	7	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-268	13193	-11	5	5prime_fragment	FALSE	canonical	3	162	junction_6	36.6409000374657	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123769027	123623753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.44	chr8	-	2760	7	NIC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	27	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	99.9156588773196	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123768989	123623753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123768687
ES.34191.45	chr8	-	2665	6	NIC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	25	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	93.9020766543531	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123768991	123623753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123768687
ES.34191.46	chr8	-	2757	7	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.9816448199645	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTTTGTTTTCTCTA	NA	False	NA	0	True	AATAAA	-19	NA	123769006	123623753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123625469_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.47	chr8	-	2880	8	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	94.8186238487536	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGTCTTTGTTTTCTC	NA	False	NA	-2	True	AATAAA	-17	NA	123769028	123623755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123625456_123626342_123626544_123626717_123626889_123627340_123627460_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.49	chr8	-	1810	9	NNC	ENSMUSG00000035569.18	novel	2934	3	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	90.6114645064299	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGGTCTTTGTTTTCT	NA	False	NA	-3	True	AATAAA	-16	NA	123769023	123623756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123624268_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.50	chr8	-	3008	8	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	87.9039364352719	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGGTCTTTGTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	123768989	123623758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123625456_123626342_123626547_123626717_123626889_123627340_123627627_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.51	chr8	-	5992	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-327	19601	-70	2640	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCACTGTGAGAAAACAC	NA	False	NA	NA	False	NA	NA	NA	123769086	123630161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.52	chr8	-	1560	5	NNC	ENSMUSG00000035569.18	novel	2934	3	NA	NA	21	2608	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	89.7008918573277	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123768995	123630193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123631098_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.53	chr8	-	3904	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-230	21592	27	649	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGGTTGGTCTGGTA	NA	False	NA	NA	False	AATAAA	-12	NA	123768989	123632152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.54	chr8	-	3288	4	ISM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-255	22233	2	8	5prime_fragment	FALSE	canonical	3	162	junction_3	28.1937739383873	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCGTTATGGAATTACGT	NA	False	NA	NA	False	NA	NA	NA	123769014	123632793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123635546_123642639_123642785_123701467_123701532_123768687
ES.34191.55	chr8	-	1014	3	FSM	ENSMUSG00000035569.18	ENSMUST00000212937.2	943	3	-72	1	-72	-1	multi-exon	FALSE	canonical	3	21	junction_1	70.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAAGTAAATTGTTC	NA	False	NA	NA	False	AATAAA	-23	NA	123769088	123658248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123658798_123701467_123701532_123768687
ES.34191.56	chr8	-	182	1	Intergenic	novelGene_27849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACATATATGTGTGTG	3127	False	NA	NA	False	TATAAA	-39	NA	123751022	123750840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123750800_123751000
ES.34191.7	chr8	-	6152	4	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	8789	499	intron_retention	FALSE	non_canonical	0	0	junction_2	183.46540697242	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCCCTTCAGGTAG	NA	False	NA	NA	False	NA	NA	NA	123617730	123610061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123611076_123612388_123613448_123613581_123614197_123614266
ES.34191.9	chr8	-	9377	13	NIC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	-134	497	intron_retention	FALSE	canonical	1	1	junction_9	116.924001908172	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCACTGTCCCTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	123769150	123610063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626923_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ES.34192.1	chr8	-	280	1	Intergenic	novelGene_27852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGACCCGTGTCCTCT	2312	False	NA	NA	False	TTTAAA	-5	NA	123791608	123791328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123791300_123791600
ES.34193.1	chr8	-	782	1	Intergenic	novelGene_27853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGCAAACAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	123809918	123809136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123809100_123809900
ES.34194.1	chr8	+	174	1	Intergenic	novelGene_27854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123828070	123828244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123828100_123828200
ES.34195.1	chr8	+	787	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	-2	-5	-2	5	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTTGTCTTTTTTTCT	NA	False	NA	22	True	AATAAA	-23	NA	123829086	123831988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ES.34195.11	chr8	+	919	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	53	-4	intron_retention	FALSE	canonical	3	17818	junction_4	2821.04696876886	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829141	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123829185_123829391_123829502_123829583_123830096_123830636_123830694_123831782
ES.34195.13	chr8	+	694	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8894.21577431085	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCATAAAGCAAAAGCTGG	NA	False	NA	2	True	AATAAA	-3	NA	123829152	123831968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829730_123829932_123830096_123830636_123830694_123831782
ES.34195.14	chr8	+	2337	4	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	64	9	64	4	intron_retention	FALSE	canonical	3	20484	junction_1	2128.66969412041	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAAGCTGGGTTTCT	NA	False	NA	8	True	AATAAA	-9	NA	123829152	123831974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921
ES.34195.15	chr8	+	573	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9284.03162424601	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829152	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831921
ES.34195.17	chr8	+	697	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9154.16570529505	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAAGCAAAAGCTGGGT	NA	False	NA	4	True	AATAAA	-5	NA	123829152	123831970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830642_123830694_123831782
ES.34195.18	chr8	+	772	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-13	intron_retention	FALSE	canonical	3	17818	junction_4	2064.50448049889	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAATAAATTTTCCATAAA	NA	False	NA	-9	True	AAGAAA	-23	NA	123829152	123831957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123829185_123829391_123829726_123829921_123830096_123830636_123830694_123831782
ES.34195.2	chr8	+	2896	1	FSM	ENSMUSG00000064450.3	ENSMUST00000082516.3	86	1	-689	-2121	-689	2121	mono-exon	FALSE	NA	NA	NA	NA	NA	1742	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829087	123831983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123829100_123832000
ES.34195.20	chr8	+	737	7	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	57463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	8476.39447065922	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGTTAGAACCATTTGT	NA	False	NA	NA	False	NA	NA	NA	123829152	123889446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782_123831976_123889417
ES.34195.21	chr8	+	606	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8523.81610313127	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829152	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829482_123829669_123829726_123829921_123830096_123830636_123830694_123831782
ES.34195.22	chr8	+	1115	4	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-4	intron_retention	FALSE	canonical	3	17818	junction_3	3209.20024651349	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829152	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123829502_123829583_123830096_123830636_123830694_123831782
ES.34195.23	chr8	+	990	4	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	-4	intron_retention	FALSE	canonical	3	17818	junction_3	1493.98110950425	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829152	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123829185_123829391_123830096_123830636_123830694_123831782
ES.34195.3	chr8	+	1853	5	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	12	4	12	-4	intron_retention	FALSE	canonical	3	20484	junction_1	2022.99505684023	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829100	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636
ES.34195.30	chr8	+	693	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	72	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	10727.3731807931	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829160	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829590_123829726_123829921_123830096_123830636_123830690_123831782
ES.34195.31	chr8	+	1497	2	Fusion	ENSMUSG00000000740.13_ENSMUSG00000064450.3	novel	488	2	NA	NA	89	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1742	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829177	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_123830594_123831898
ES.34195.32	chr8	+	894	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	89	-4	intron_retention	FALSE	canonical	3	17818	junction_4	2909.59597710747	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829177	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ES.34195.33	chr8	+	2459	8	NNC	ENSMUSG00000034796.15	novel	3018	14	NA	NA	-127	2	intron_retention	FALSE	canonical	3	6	junction_1	5.96930926165034	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTTTCTTGCTT	NA	False	NA	6	True	AATAAA	-18	NA	123853128	123861923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123854179_123854479_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.34	chr8	+	2266	8	NNC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.84792146697258	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTGTGCCTTTCTTGC	NA	False	NA	4	True	AATAAA	-16	NA	123853162	123861921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123853474_123853559_123854179_123855335_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.35	chr8	+	1803	9	NNC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-89	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.75806032459145	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTTTCTTGCTT	NA	False	NA	6	True	AATAAA	-18	NA	123853166	123861923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123853474_123854091_123854179_123854479_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.36	chr8	+	3417	4	ISM	ENSMUSG00000034796.15	ENSMUST00000131659.8	3542	12	8984	3263	-86	27	intron_retention	FALSE	canonical	3	16	junction_2	3.29983164553722	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAGAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	123853169	123858658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123854532_123855316_123855451_123856281_123856337_123856792
ES.34195.37	chr8	+	2097	8	NIC	ENSMUSG00000034796.15	novel	2398	15	NA	NA	-82	2	intron_retention	FALSE	canonical	1	2	junction_1	7.18558647997674	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCCTTTCTTGCTT	NA	False	NA	6	True	AATAAA	-18	NA	123853173	123861923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123853474_123854091_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.38	chr8	+	3086	5	ISM	ENSMUSG00000034796.15	ENSMUST00000134235.8	3018	14	9068	3288	-75	0	intron_retention	FALSE	canonical	3	10	junction_1	5.30919014539883	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	123853180	123858631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792
ES.34195.39	chr8	+	1795	9	ISM	ENSMUSG00000034796.15	ENSMUST00000037900.9	2398	15	9064	0	-75	0	3prime_fragment	FALSE	canonical	1	2	junction_1	7.1894019222742	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTGTGCCTTTCTTGC	NA	False	NA	4	True	AATAAA	-16	NA	123853180	123861921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123853474_123854091_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.40	chr8	+	2409	8	ISM	ENSMUSG00000034796.15	ENSMUST00000134235.8	3018	14	9072	-2	-71	0	3prime_fragment	FALSE	canonical	3	10	junction_1	4.85293935756087	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTGTGCCTTTCTTGC	NA	False	NA	4	True	AATAAA	-16	NA	123853184	123861921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123854179_123854471_123854532_123855316_123855451_123856281_123856337_123856792_123856845_123856911_123857046_123860347_123860585_123861178
ES.34195.41	chr8	+	3117	6	NIC	ENSMUSG00000034796.15	novel	3018	14	NA	NA	-51	0	intron_retention	FALSE	canonical	2	3	junction_1	7.56306816047562	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACAGCCTGTGCCTTTCTT	NA	False	NA	2	True	AATAAA	-14	NA	123853204	123861919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123853474_123853559_123854532_123855316_123855451_123856281_123857046_123860347_123860585_123861178
ES.34195.43	chr8	+	176	1	Intergenic	novelGene_27856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTGTGT	9062	False	NA	NA	False	NA	NA	NA	123862854	123863030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123862900_123863000
ES.34195.7	chr8	+	2038	4	FSM	ENSMUSG00000000740.13_ENSMUSG00000098550.3	ENSMUST00000132275.8	993	4	-269	-776	34	-4	multi-exon	FALSE	canonical	3	21322	junction_3	1773.2037546643	1742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829122	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636
ES.34195.8	chr8	+	733	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	40	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9284.03162424601	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829128	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830698_123831789
ES.34195.9	chr8	+	710	6	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	48	-4	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_3	8883.86001690707	1742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTGGGTTTCTTTGTC	NA	False	NA	13	True	AATAAA	-14	NA	123829136	123831979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123829185_123829391_123829502_123829583_123829726_123829939_123830096_123830636_123830694_123831782
ES.34196.1	chr8	-	156	1	Intergenic	novelGene_27855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAAATAAATCAATCT	NA	False	NA	NA	False	NA	NA	NA	123833626	123833470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123833500_123833600
ES.34197.1	chr8	-	1180	7	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	-6	7	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	23.3380947522857	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCCAGGCTCAGCC	9733	False	NA	0	True	AATAAA	-23	NA	123885019	123869580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884342_123884926
ES.34197.2	chr8	-	994	6	FSM	ENSMUSG00000000739.15	ENSMUST00000122819.8	1053	6	60	-1	18	1	multi-exon	FALSE	canonical	2	9	junction_2	38.0189426470542	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACTCTGTCCCAGGC	9803	False	NA	-6	True	AATAAA	-17	NA	123884949	123869586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123869886_123872080_123872262_123875048_123875176_123875957_123876173_123884177_123884327_123884926
ES.34197.3	chr8	-	1176	7	FSM	ENSMUSG00000000739.15	ENSMUST00000000755.15	3805	7	-27	2656	18	1	multi-exon	FALSE	canonical	3	57	junction_6	18.7764628073435	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACTCTGTCCCAGGC	9716	False	NA	-6	True	AATAAA	-17	NA	123885036	123869586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123869886_123872080_123872262_123874789_123874885_123875048_123875176_123875957_123876173_123884177_123884327_123884926
ES.34197.4	chr8	-	4319	2	FSM	ENSMUSG00000000739.15	ENSMUST00000126951.2	674	2	-1141	-2504	-1100	2504	multi-exon	FALSE	canonical	3	57	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTAGGACCAAGTCATC	9602	False	NA	NA	False	NA	NA	NA	123886154	123881235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123884327_123884926
ES.34197.5	chr8	-	3564	1	NIC	ENSMUSG00000000739.15	novel	3805	7	NA	NA	168	2504	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTAGGACCAAGTCATC	9953	False	NA	NA	False	NA	NA	NA	123884799	123881235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123881200_123884800
ES.34197.6	chr8	-	2555	3	NNC	ENSMUSG00000000739.15	novel	674	2	NA	NA	5	2504	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTAGGACCAAGTCATC	9703	False	NA	NA	False	NA	NA	NA	123885049	123881235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123883519_123884177_123884327_123884926
ES.34197.7	chr8	-	3175	2	FSM	ENSMUSG00000000739.15	ENSMUST00000152722.2	460	2	31	-2746	-10	2476	multi-exon	FALSE	canonical	3	43	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	9729	False	NA	NA	False	AATACA	-21	NA	123885023	123881263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123884342_123884926
ES.34198.1	chr8	+	1110	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	4	1	4	-1	multi-exon	FALSE	canonical	2	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAACATGGTGGTGTGTC	3332	False	NA	0	True	NA	NA	NA	123899587	123905503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123899783_123904588
ES.34199.1	chr8	+	1669	11	FSM	ENSMUSG00000019278.6	ENSMUST00000019422.6	2236	11	-21	588	-21	-588	multi-exon	FALSE	canonical	1	3	junction_1	3.46554469023269	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGAGTGGGCACGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	123912959	123927963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123913181_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
ES.34199.2	chr8	+	1567	11	NNC	ENSMUSG00000019278.6	novel	985	7	NA	NA	-102	-588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGAGTGGGCACGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	123920130	123927963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123920250_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
ES.34199.3	chr8	+	1437	10	NNC	ENSMUSG00000019278.6	novel	985	7	NA	NA	-33	-564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.44166579806815	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCTGGGAGATTCTTC	NA	False	NA	NA	False	AATAAA	-38	NA	123920199	123927987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123920250_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123927105_123927182_123927376_123927513_123927630
ES.342.1	chr1	-	5095	20	NNC	ENSMUSG00000037138.19	novel	5857	22	NA	NA	119851	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.03160621743356	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGCAGCACTGCGAC	NA	False	NA	0	True	AATATA	-15	NA	38546415	38216406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38218652_38220340_38220517_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38541254_38541378_38546335
ES.342.2	chr1	-	5982	23	NNC	ENSMUSG00000037138.19	novel	5948	23	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.15322168769582	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGCAGCACTGCGAC	NA	False	NA	0	True	AATATA	-15	NA	38666542	38216406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38218652_38220340_38220565_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38573986_38574373_38574491_38574805_38575906_38576028_38666169_38666326_38666476
ES.342.4	chr1	-	7240	1	Antisense	novelGene_ENSMUSG00000085391.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTCTAGTACTGTGGT	NA	False	NA	NA	False	TTTAAA	-42	NA	38285152	38277912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_38277900_38285200
ES.342.5	chr1	-	7580	1	Antisense	novelGene_ENSMUSG00000085280.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATTCCTAAAACTGAGGT	NA	False	NA	NA	False	NA	NA	NA	38352102	38344522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_38344500_38352100
ES.3420.1	chr10	-	11279	1	Intergenic	novelGene_2636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	81938798	81927519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81927500_81938800
ES.34200.1	chr8	-	351	2	Antisense	novelGene_ENSMUSG00000019278.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGCAGACGGCATGTT	7408	False	NA	NA	False	AATAAA	-24	NA	123918526	123917244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_123917415_123918345
ES.34201.1	chr8	+	501	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	-55	-47	-55	47	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCCTACATTTCAGC	NA	False	NA	NA	False	AATAAA	-43	NA	123933306	123933807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123933300_123933800
ES.34202.1	chr8	-	5110	4	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_2	264.419279848417	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTTTTTTTTTTAA	9747	False	NA	-2	True	AATAAA	-18	NA	123939497	123931000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933256_123933815_123936975_123939404
ES.34202.10	chr8	-	2722	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	226.423497013892	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9745	False	NA	-9	True	AATAAA	-11	NA	123939499	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933246_123933804_123934341_123934702_123934850_123935759_123935838_123939379
ES.34202.11	chr8	-	2134	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	1	5	1	-5	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9746	False	NA	-9	True	AATAAA	-11	NA	123939498	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
ES.34202.12	chr8	-	3834	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	1	-5	intron_retention	TRUE	non_canonical	0	0	junction_2	213.727864350908	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9746	False	NA	-9	True	AATAAA	-11	NA	123939498	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933246_123933803_123934341_123934702_123934850_123935759_123936975_123939404
ES.34202.13	chr8	-	2030	7	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.90678864206	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9766	False	NA	-9	True	AATAAA	-11	NA	123939478	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123931587_123931675_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
ES.34202.14	chr8	-	4147	5	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	15	-5	intron_retention	FALSE	canonical	3	428	junction_1	74.7408021096911	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9760	False	NA	-9	True	AATAAA	-11	NA	123939484	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123936975_123939404
ES.34202.15	chr8	-	3614	5	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	-5	intron_retention	FALSE	canonical	3	428	junction_1	79.5719014476844	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9745	False	NA	-9	True	AATAAA	-11	NA	123939499	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123932486_123932882_123933071_123934211_123934850_123935759_123936975_123939404
ES.34202.16	chr8	-	2045	7	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.90678864206	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9761	False	NA	-9	True	AATAAA	-11	NA	123939483	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123931489_123931567_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
ES.34202.17	chr8	-	2158	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACGTCTCAGACTTTT	9746	False	NA	-10	True	AATAAA	-10	NA	123939498	123931008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935858_123939379
ES.34202.18	chr8	-	5089	4	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	16	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	264.419279848417	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACGTCTCAGACTTTT	9761	False	NA	-10	True	AATAAA	-10	NA	123939483	123931008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933246_123933804_123936975_123939404
ES.34202.19	chr8	-	2632	7	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	194.69777148756	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACGTCTCAGACTTT	9737	False	NA	-11	True	AATAAA	-9	NA	123939507	123931009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936463_123936975_123939404
ES.34202.20	chr8	-	4197	5	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	0	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	233.10566273688	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAACGTCTCAGACTTT	9742	False	NA	-11	True	AATAAA	-9	NA	123939502	123931009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933246_123933804_123934850_123935759_123936975_123939404
ES.34202.3	chr8	-	2152	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTCAGACTTTTTTTTT	9732	False	NA	-5	True	AATAAA	-15	NA	123939512	123931003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935858_123939404
ES.34202.4	chr8	-	2364	6	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	-218	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.847163982072	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTCAGACTTTTTTTT	9524	False	NA	-6	True	AATAAA	-14	NA	123939720	123931004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123939379
ES.34202.5	chr8	-	4594	4	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	267.218179687602	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTCAGACTTTTTTT	9746	False	NA	-7	True	AATAAA	-13	NA	123939498	123931005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123933246_123933804_123934850_123935759_123936975_123939404
ES.34202.6	chr8	-	3638	4	NNC	ENSMUSG00000000743.10	novel	1355	5	NA	NA	34	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	225.04271199535	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTCAGACTTTTTTT	NA	False	NA	-7	True	AATAAA	-13	NA	123936474	123931005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123933246_123933804_123934341_123934702_123934850_123935759
ES.34202.7	chr8	-	3271	6	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	428	junction_1	71.2673838442243	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTCTCAGACTTTTTTT	9728	False	NA	-7	True	AATAAA	-13	NA	123939516	123931005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123936975_123939404
ES.34202.9	chr8	-	2118	7	NNC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.90678864206	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	9770	False	NA	-9	True	AATAAA	-11	NA	123939474	123931007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123931587_123931675_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935930_123939379
ES.34203.1	chr8	+	350	2	FSM	ENSMUSG00000048478.8	ENSMUST00000212637.2	569	2	215	4	-140	-2	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGGGATCCTTTCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	123939851	123948781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123939977_123948556
ES.34204.1	chr8	-	160	1	Intergenic	novelGene_27857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8578	False	NA	NA	False	NA	NA	NA	123947193	123947033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_123947000_123947200
ES.34205.1	chr8	+	1778	11	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	-10	3	intron_retention	FALSE	canonical	1	2	junction_8	84.9084801418563	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTTTGGCAATCCTTT	2115	False	NA	13	True	GATAAA	-14	NA	123951570	123958992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957332_123957457_123957530_123957671_123958098
ES.34205.10	chr8	+	1656	13	NNC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	97.0450568321517	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2145	False	NA	12	True	GATAAA	-13	NA	123951600	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955674_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958336
ES.34205.11	chr8	+	1598	13	NNC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.3143958507366	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGCAATCCTTTAATG	2147	False	NA	17	True	GATAAA	-18	NA	123951602	123958996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951679_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.13	chr8	+	1712	12	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	85	junction_1	51.4876218776083	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2151	False	NA	10	True	GATAAA	-11	NA	123951606	123958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.14	chr8	+	1614	13	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	78.6862175564014	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2151	False	NA	12	True	GATAAA	-13	NA	123951606	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955674_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.15	chr8	+	1601	13	NIC	ENSMUSG00000033862.8	novel	1638	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_5	78.3856208469101	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2152	False	NA	10	True	GATAAA	-11	NA	123951607	123958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954505_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.16	chr8	+	1611	13	NNC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.2746101613757	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2152	False	NA	12	True	GATAAA	-13	NA	123951607	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951708_123953085_123953159_123953684_123953757_123954167_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.17	chr8	+	1908	12	NNC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_7	84.1690545988614	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2152	False	NA	12	True	GATAAA	-13	NA	123951607	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955787_123955921_123957006_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.18	chr8	+	1678	13	NNC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	70.9230803993547	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2154	False	NA	12	True	GATAAA	-13	NA	123951609	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955787_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.19	chr8	+	1642	12	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	50.6995688442391	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2161	False	NA	10	True	GATAAA	-11	NA	123951616	123958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957671_123958098_123958152_123958372
ES.34205.2	chr8	+	1651	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	-2	-7	-2	7	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGCAATCCTTTAATG	2123	False	NA	17	True	GATAAA	-18	NA	123951578	123958996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.20	chr8	+	1695	13	NNC	ENSMUSG00000033862.8	novel	1638	13	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.5115857349594	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2163	False	NA	12	True	GATAAA	-13	NA	123951618	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951795_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954483_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.21	chr8	+	2886	8	NIC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	-385	2	intron_retention	FALSE	canonical	3	223	junction_6	19.7659777787748	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	3694	False	NA	12	True	GATAAA	-13	NA	123953149	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123958152_123958372
ES.34205.22	chr8	+	3022	7	NIC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	-255	2	intron_retention	FALSE	canonical	3	233	junction_1	17.3725517859512	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	3824	False	NA	12	True	GATAAA	-13	NA	123953279	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123958152_123958372
ES.34205.23	chr8	+	3851	4	NIC	ENSMUSG00000033862.8	novel	648	8	NA	NA	-247	2	intron_retention	FALSE	canonical	3	205	junction_2	26.5371856499935	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	162	False	NA	12	True	GATAAA	-13	NA	123954187	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123955136_123955586_123957457_123957530_123957671_123958098
ES.34205.24	chr8	+	2407	5	NIC	ENSMUSG00000110505.2	novel	753	4	NA	NA	-3141	-9910	intron_retention	FALSE	canonical	3	238	junction_3	19.7547462651384	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	371	False	NA	10	True	GATAAA	-11	NA	123954396	123958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123955136_123955586_123955921_123957006_123957671_123958098_123958152_123958372
ES.34205.25	chr8	+	3723	1	Genic_Genomic	ENSMUSG00000033862.8_ENSMUSG00000110505.2	novel	NA	NA	NA	NA	-333	4	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTTGGCAATCCTTTA	1245	False	NA	14	True	GATAAA	-15	NA	123955270	123958993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_123955300_123959000
ES.34205.3	chr8	+	1609	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-24	-5	0	5	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGGCAATCCTTTAA	2125	False	NA	15	True	GATAAA	-16	NA	123951580	123958994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.4	chr8	+	692	8	NNC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.5815662401101	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTTACCCTCTGGTG	2127	False	NA	NA	False	AGTAAA	-14	NA	123951582	123955903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955787
ES.34205.5	chr8	+	2318	10	ISM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-13	-2	-1	2	intron_retention	FALSE	canonical	3	85	junction_1	56.0178542966437	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2136	False	NA	12	True	GATAAA	-13	NA	123951591	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332
ES.34205.6	chr8	+	2737	9	NNC	ENSMUSG00000033862.8	novel	1642	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	84.4518168839487	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2137	False	NA	10	True	GATAAA	-11	NA	123951592	123958989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951708_123953085_123953159_123953684_123954265_123954398_123954481_123955088_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332
ES.34205.7	chr8	+	1557	12	NIC	ENSMUSG00000033862.8	novel	1580	13	NA	NA	1	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	81.0807168482624	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2138	False	NA	12	True	GATAAA	-13	NA	123951593	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955674_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34205.8	chr8	+	2582	9	ISM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	-11	-2	1	2	intron_retention	FALSE	canonical	3	85	junction_1	59.2356258935448	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTTGGCAATCCTT	2138	False	NA	12	True	GATAAA	-13	NA	123951593	123958991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006
ES.34205.9	chr8	+	1699	13	NNC	ENSMUSG00000033862.8	novel	1638	13	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_5	89.9641904068255	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAAGACAGTTTGGCAA	2141	False	NA	7	True	GATAAA	-8	NA	123951596	123958986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954317_123954398_123954505_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ES.34206.1	chr8	-	2685	2	FSM	ENSMUSG00000033594.12	ENSMUST00000166768.3	2707	2	22	0	-2	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAAAGGCTTTTTATC	NA	False	NA	NA	False	ATTAAA	-17	NA	123962950	123958993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123960985_123962256
ES.34207.1	chr8	+	184	1	Intergenic	novelGene_27858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	123967743	123967927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_123967700_123967900
ES.34208.1	chr8	-	3571	15	NNC	ENSMUSG00000001062.19	novel	2952	15	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	8.21801157736556	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATGTGACTTGTTCGTT	2231	False	NA	NA	False	AATAAA	-18	NA	123980905	123969094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123973949_123974135_123974286_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ES.34208.2	chr8	-	2969	14	NIC	ENSMUSG00000001062.19	novel	2728	15	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_7	8.00960961307392	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTGACTTGTTCG	2214	False	NA	NA	False	AATAAA	-16	NA	123980922	123969096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974811_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ES.34208.3	chr8	-	2773	15	NNC	ENSMUSG00000001062.19	novel	2952	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	7.05698380387565	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTGACTTGTTCG	2223	False	NA	NA	False	AATAAA	-16	NA	123980913	123969096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977756_123979343_123979420_123980726
ES.34208.5	chr8	-	3470	13	NIC	ENSMUSG00000001062.19	novel	3233	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	12	junction_11	5.18812747209113	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTGACTTGTTCG	2232	False	NA	NA	False	AATAAA	-16	NA	123980904	123969096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123969929_123970426_123970532_123971852_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ES.34208.6	chr8	-	1824	7	NIC	ENSMUSG00000001062.19	novel	2728	15	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	8.23441288469042	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTGACTTGTTCG	8342	False	NA	NA	False	AATAAA	-16	NA	123974794	123969096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972682_123972813_123973463_123973949_123974452_123974539_123974705
ES.34208.7	chr8	-	3197	14	NNC	ENSMUSG00000001062.19	novel	3233	14	NA	NA	-16	0	intron_retention	FALSE	canonical	1	4	junction_12	6.55337665346119	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCATGTGACTTGTTC	2205	False	NA	NA	False	AATAAA	-15	NA	123980931	123969097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123975416_123975500_123975613_123977416_123977580_123977665_123977756_123979343_123979420_123980726
ES.34208.8	chr8	-	2512	14	NNC	ENSMUSG00000001062.19	novel	2952	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.18499131583147	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCATGTGACTTGTTC	2296	False	NA	NA	False	AATAAA	-15	NA	123980840	123969097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123969929_123970426_123970532_123971852_123971950_123972682_123972813_123973463_123973949_123974452_123974555_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ES.34209.1	chr8	+	4048	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	26	-3	26	3	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTTGTTACTGTTTGG	1660	False	NA	24	True	AGTAAA	-27	NA	123980959	123996487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.10	chr8	+	4124	9	NIC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	1	-6	intron_retention	FALSE	canonical	3	13	junction_5	4.9228421668788	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCTGCCCAGAGTTG	1711	False	NA	13	True	ATTAAA	-42	NA	123981010	123996476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338
ES.34209.11	chr8	+	2694	10	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	6	292	intron_retention	FALSE	canonical	3	9	junction_5	5.45237517617124	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGGTGCGCTGAGATG	1716	False	NA	NA	False	AATAAA	-16	NA	123981015	123995153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.12	chr8	+	4864	10	ISM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	83	-806	-6	806	intron_retention	FALSE	canonical	3	13	junction_5	4.93913572686508	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTACATTTTATTTT	1717	False	NA	NA	False	AATAAA	-29	NA	123981016	123997290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338
ES.34209.13	chr8	+	2615	8	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	95	292	intron_retention	FALSE	canonical	0	0	junction_2	8.92371296385224	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGGTGCGCTGAGATG	1818	False	NA	NA	False	AATAAA	-16	NA	123981117	123995153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123981663_123982445_123982750_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338
ES.34209.14	chr8	+	1807	10	NNC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	215	13375	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	8.28653526310404	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTTGCGACAGTCCT	2340	False	NA	NA	False	ATTAAA	-18	NA	123981639	124009859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_124009309
ES.34209.15	chr8	+	1938	9	NIC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	-129	290	intron_retention	FALSE	canonical	3	13	junction_4	4.87339717240448	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTGGTGCGCTGAGA	3285	False	NA	NA	False	AATAAA	-14	NA	123982584	123995151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.16	chr8	+	2045	10	NNC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	-38	290	intron_retention	FALSE	canonical	0	0	junction_5	10.788654305723	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTGGTGCGCTGAGA	3376	False	NA	NA	False	AATAAA	-14	NA	123982675	123995151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123986521_123986623_123991554_123991666_123991733_123991810_123992052_123992171_123994243
ES.34209.17	chr8	+	1520	7	NNC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	684	291	intron_retention	FALSE	non_canonical	0	0	junction_3	11.1952370824978	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTGGTGCGCTGAGAT	370	False	NA	NA	False	AATAAA	-15	NA	123983397	123995152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123983605_123985049_123985097_123986169_123986306_123991554_123991810_123992052_123992171_123994338_123994666_123994722
ES.34209.19	chr8	+	2378	2	ISM	ENSMUSG00000001065.16	ENSMUST00000147312.2	676	5	7835	-1825	2474	-1	3prime_fragment	FALSE	canonical	3	19	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCCAGAGTTGTTACT	NA	False	NA	18	True	AGTAAA	-21	NA	123994033	123996481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123994439_123994508
ES.34209.2	chr8	+	2796	9	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	-33	285	intron_retention	FALSE	canonical	3	9	junction_5	5.77575752607396	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGCCGGCTGGTGCGC	1677	False	NA	NA	False	AATAAA	-9	NA	123980976	123995146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338
ES.34209.20	chr8	+	2797	3	Intergenic	novelGene_27859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATAAATATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	124006014	124067270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124008624_124062813_124062865_124067133
ES.34209.21	chr8	+	179	1	Intergenic	novelGene_27860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGCATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	124013434	124013613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124013400_124013600
ES.34209.22	chr8	+	5011	16	Antisense	novelGene_ENSMUSG00000032815.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATATATATGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	124015781	124041124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_124018213_124021744_124021795_124021870_124021934_124024507_124024565_124024647_124024743_124026746_124026859_124031029_124031167_124031478_124031617_124031989_124032069_124032488_124032605_124033166_124033228_124033868_124033905_124034454_124034539_124035246_124035356_124039318_124039397_124039759
ES.34209.23	chr8	+	180	1	Intergenic	novelGene_27861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	542	False	NA	NA	False	NA	NA	NA	124048153	124048333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124048200_124048300
ES.34209.24	chr8	+	2416	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-82	-4	-82	4	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTCTCTTTCCCTACA	NA	False	NA	22	True	NA	NA	NA	124059369	124096258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.25	chr8	+	3069	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	-44	-695	-44	695	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGCATATCATGTTATT	NA	False	NA	NA	False	AGTAAA	-19	NA	124059407	124096949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.26	chr8	+	2311	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-23	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	20.1212302140163	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTCTCTTTCCCTA	NA	False	NA	20	True	NA	NA	NA	124059428	124096256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124059760_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.27	chr8	+	2915	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-22	2	intron_retention	FALSE	canonical	3	49	junction_7	8.53811503108407	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTCTCTTTCCCTA	NA	False	NA	20	True	NA	NA	NA	124059429	124096256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.28	chr8	+	2526	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	20.0658355196598	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATACATTGTCTCTTTCC	NA	False	NA	17	True	NA	NA	NA	124059446	124096253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090322_124093574_124093603_124095416_124095533_124095910
ES.34209.3	chr8	+	4065	10	NIC	ENSMUSG00000001065.16	novel	4111	10	NA	NA	-27	7	intron_retention	FALSE	canonical	3	9	junction_5	5.45237517617124	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTACTGTTTGGAGGT	1683	False	NA	28	True	AGTAAA	-31	NA	123980982	123996491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985097_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.30	chr8	+	3471	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	0	-1141	0	1141	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACAGACCACCTTTGT	NA	False	NA	NA	False	AGTAAA	-34	NA	124059451	124097395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.32	chr8	+	2071	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	19.8314324819392	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	False	NA	18	True	NA	NA	NA	124059729	124096254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084829_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.33	chr8	+	2222	15	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8655	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1166242552912	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATATATGGCCTATAT	1199	False	NA	-4	True	NA	NA	NA	124068334	124096232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.34	chr8	+	2337	14	NNC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	-8601	-22	intron_retention	FALSE	canonical	0	0	junction_1	20.8516881668675	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATATATGGCCTATAT	1253	False	NA	-4	True	NA	NA	NA	124068388	124096232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124068557_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.36	chr8	+	2698	11	NIC	ENSMUSG00000010154.8	novel	2158	14	NA	NA	5758	2	intron_retention	FALSE	canonical	3	49	junction_4	8.64927742646748	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGTCTCTTTCCCTA	NA	False	NA	20	True	NA	NA	NA	124082747	124096256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ES.34209.37	chr8	+	155	1	Intergenic	novelGene_27862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	124088930	124089085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124088900_124089100
ES.34209.4	chr8	+	2682	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	58	1331	-18	292	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGGTGCGCTGAGATG	1692	False	NA	NA	False	AATAAA	-16	NA	123980991	123995153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.5	chr8	+	4811	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	60	-800	-16	800	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTGTTGCTACATTT	1694	False	NA	NA	False	AATAAA	-23	NA	123980993	123997284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.6	chr8	+	4057	10	NNC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	-2	-12	intron_retention	FALSE	canonical	0	0	junction_9	7.90842651078855	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGAAGTTTGCTGCCCA	1708	False	NA	7	True	ATTAAA	-36	NA	123981007	123996470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991810_123992052_123992171_123994338_123994445_123994508
ES.34209.7	chr8	+	4055	10	ISM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	75	11	-1	-9	intron_retention	FALSE	canonical	3	13	junction_5	4.93913572686508	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTTGCTGCCCAGAG	1709	False	NA	10	True	ATTAAA	-39	NA	123981008	123996473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338
ES.34209.8	chr8	+	7873	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	76	-3878	0	3878	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCCTGGTCATGGTGTC	1710	False	NA	NA	False	NA	NA	NA	123981009	124000362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ES.34209.9	chr8	+	2724	11	NNC	ENSMUSG00000001065.16	novel	4071	11	NA	NA	1	184	intron_retention	FALSE	canonical	0	0	junction_6	9.11317727249942	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAATATTTCTTTTCCT	1711	False	NA	NA	False	NA	NA	NA	123981010	123995045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123986521_123986623_123991554_123991810_123992052_123992171_123994338_123994439_123994508
ES.3421.1	chr10	+	12175	4	Fusion	ENSMUSG00000078435.6_ENSMUSG00000112847.2_ENSMUSG00000112922.2	novel	2634	4	NA	NA	-2	-606	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCAGACTGCCCCTGCG	NA	False	NA	NA	False	NA	NA	NA	81963844	82002012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_81963933_81974086_81974214_81986050_81986112_81990113
ES.3421.2	chr10	+	458	4	FSM	ENSMUSG00000078435.6	ENSMUST00000201286.4	2634	4	-2	2178	-2	-1124	multi-exon	FALSE	canonical	1	5	junction_2	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACATACTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81963844	81986721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81963933_81974086_81974214_81986050_81986112_81986539
ES.3421.3	chr10	+	2666	5	NNC	ENSMUSG00000078435.6	novel	2634	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.53553390593274	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTTCTGTTTCTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	81963847	81988899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_81963933_81974086_81974214_81979420_81979454_81986050_81986112_81986539
ES.3421.4	chr10	+	2905	2	ISM	ENSMUSG00000078435.6	ENSMUST00000105314.3	1494	3	11480	-1054	11480	0	3prime_fragment	FALSE	canonical	2	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTTCTGTTTCTCCA	6902	False	NA	NA	False	AATAAA	-17	NA	81985566	81988899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_81986112_81986539
ES.3421.5	chr10	+	6170	1	FSM	ENSMUSG00000112847.2	ENSMUST00000218999.2	2538	1	-600	-3032	-600	3032	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGGTCATGTTTTCT	2421	False	NA	NA	False	NA	NA	NA	81999480	82005650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81999500_82005600
ES.3421.6	chr10	+	1735	1	FSM	ENSMUSG00000112847.2	ENSMUST00000218999.2	2538	1	-271	1074	-271	-1074	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGTGTGTTATTGGAG	2750	False	NA	NA	False	NA	NA	NA	81999809	82001544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_81999800_82001500
ES.3421.7	chr10	+	4713	2	Genic_Genomic	ENSMUSG00000112847.2	novel	2538	1	NA	NA	276	3032	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGGTCATGTTTTCT	3297	False	NA	NA	False	NA	NA	NA	82000356	82005650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_82003138_82003718
ES.34210.1	chr8	-	6538	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	-6	-2047	-6	2047	multi-exon	TRUE	canonical	3	94	junction_17	20.5305065860605	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCTGAATGAATGCCAC	NA	False	NA	41	True	TATAAA	-21	NA	124045321	123992991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.10	chr8	-	4501	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-17	72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.4053506505065	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTCAGCCCAAGAGAGG	NA	False	NA	68	True	AATAAA	-31	NA	124045332	123994966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996085_123996654_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.12	chr8	-	5110	41	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	4	3	intron_retention	FALSE	canonical	0	0	junction_4	34.952244205487	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGCCTTATTGTTCA	NA	False	NA	-1	True	AAGAAA	-20	NA	124045311	123995035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996202_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010822_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.13	chr8	-	4457	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	28.6688122120676	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCCTTATTGTTC	NA	False	NA	-2	True	AAGAAA	-19	NA	124045286	123995036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031156_124031468_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.14	chr8	-	4434	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	27.7349783656543	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTGGCCTTATTGTT	NA	False	NA	-3	True	AAGAAA	-18	NA	124045311	123995037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995529_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.15	chr8	-	4422	42	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	33.8643231954343	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045327	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015243_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.16	chr8	-	9214	41	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	6	0	intron_retention	TRUE	canonical	0	0	junction_32	34.6101141286763	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045309	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124004129_124004568_124005084_124007930_124008060_124009356_124009431_124010747_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.17	chr8	-	4461	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.6673884579278	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045297	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010919_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.19	chr8	-	4386	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_25	28.378968509418	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045305	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.2	chr8	-	4281	22	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2414	2006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.9970162332569	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTCATTTATATAA	5216	False	NA	0	True	AATAAA	-23	NA	124016186	123993032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123994355_123994486_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099
ES.34210.20	chr8	-	3878	37	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.2688016818093	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045287	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996089_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044370_124044494_124044800_124044911_124045213
ES.34210.22	chr8	-	4395	42	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	29.0066762915445	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045309	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039966_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.23	chr8	-	4575	44	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	38.9376364830189	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045286	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015218_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044370_124044494_124044800_124044911_124045213
ES.34210.24	chr8	-	4483	44	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.7985794037761	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045292	123995038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124008188_124008210_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.25	chr8	-	4343	41	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	13	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	28.8218233288597	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045286	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.27	chr8	-	3000	30	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.9764591680869	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045303	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996086_124014845_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.28	chr8	-	4574	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	28.3346938448865	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045309	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018038_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.29	chr8	-	4626	14	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-1123	-1	intron_retention	FALSE	canonical	0	0	junction_4	57.1639394752615	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124010529	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996202_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004568_124005084_124007930
ES.34210.3	chr8	-	3777	11	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	877	2006	intron_retention	FALSE	canonical	0	0	junction_9	50.3131195614027	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGTCATTTATATAA	NA	False	NA	0	True	AATAAA	-23	NA	124002460	123993032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001206_124001313_124001870
ES.34210.30	chr8	-	7424	40	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_35	44.770523081768	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045292	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039873_124039978_124040113_124043101_124043196_124044370_124044494_124044800_124044911_124045213
ES.34210.31	chr8	-	2123	7	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-779	-1	intron_retention	FALSE	canonical	3	135	junction_5	11.310025051549	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124001741	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886
ES.34210.32	chr8	-	4367	42	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	27.820320914758	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045283	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996684_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.33	chr8	-	4394	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	28.56213157145	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045336	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124045213
ES.34210.34	chr8	-	4604	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	27.9816205469836	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045286	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008210_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.35	chr8	-	4417	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	28.6668347566659	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045297	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124040026_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.36	chr8	-	4478	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	28.6404820295391	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045309	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024573_124024654_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.38	chr8	-	4403	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	2	15	junction_38	27.438124646495	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045331	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.39	chr8	-	4380	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.4053506505065	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045297	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996089_123996670_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.40	chr8	-	4488	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	28.6668347566659	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045303	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039873_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.41	chr8	-	4663	44	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	38.6307700939679	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045311	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018211_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124030547_124030734_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.42	chr8	-	3707	36	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-2881	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	42.2503326879789	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124034499	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015224_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018211_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024758_124026778_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452
ES.34210.45	chr8	-	1904	13	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-267	-1	intron_retention	FALSE	canonical	1	2	junction_12	45.6352537945051	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124005060	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004568
ES.34210.46	chr8	-	3070	30	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.9466335621955	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	124045297	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009398_124026808_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.49	chr8	-	4221	4	FSM	ENSMUSG00000032815.17	ENSMUST00000211934.2	701	4	-3303	-217	1190	-1	multi-exon	FALSE	canonical	3	149	junction_3	19.2584757675391	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGTCTGGCCTTATT	NA	False	NA	-6	True	AAGAAA	-15	NA	123999772	123995040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028
ES.34210.5	chr8	-	5253	15	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	34335	-2001	-1574	2001	intron_retention	FALSE	canonical	3	99	junction_14	22.3570287537024	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATTTTGGTCATTTA	9964	False	NA	-5	True	AATAAA	-18	NA	124010980	123993037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356
ES.34210.51	chr8	-	4527	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	34.3753458032493	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045297	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005078_124007930_124008060_124009356_124009500_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.52	chr8	-	7096	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	50	-2	intron_retention	FALSE	canonical	0	0	junction_14	38.909016495227	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045249	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004623_124005084_124007930_124008060_124008188_124008210_124009356_124009431_124010747_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.53	chr8	-	3770	36	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.3130325546679	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045292	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996094_124001862_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.54	chr8	-	4587	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-2	intron_retention	FALSE	canonical	3	94	junction_17	20.7630179629934	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045297	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.55	chr8	-	4320	42	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	29.0066762915445	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045297	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124040026_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.56	chr8	-	4438	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	33.1425150502323	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGGCCTTAT	NA	False	NA	-7	True	AAGAAA	-14	NA	124045285	123995041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995572_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045222
ES.34210.57	chr8	-	6175	38	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-1	-3	intron_retention	FALSE	canonical	2	15	junction_34	28.0279782996842	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCTGTGTCTGGCCTTA	NA	False	NA	-8	True	AAGAAA	-13	NA	124045300	123995042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123998080_123999058_123999172_124000886_124000992_124001075_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.58	chr8	-	4491	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.3556248220884	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCTGTGTCTGGCCTTA	NA	False	NA	-8	True	AAGAAA	-13	NA	124045287	123995042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013312_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039873_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.59	chr8	-	3471	16	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	32795	4	-3114	-3	3prime_fragment	FALSE	canonical	3	99	junction_14	22.4037695240977	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCTGTGTCTGGCCTTA	8882	False	NA	-8	True	AAGAAA	-13	NA	124012520	123995042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747
ES.34210.6	chr8	-	4964	26	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-4491	1996	intron_retention	FALSE	canonical	2	3	junction_14	34.6790080596317	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAAAAGATTTTGGTC	NA	False	NA	-10	True	AATAAA	-13	NA	124023091	123993042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008210_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032
ES.34210.60	chr8	-	4501	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	-21	5	-21	-4	multi-exon	FALSE	canonical	3	94	junction_17	20.5305065860605	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATCTGTGTCTGGCCTT	NA	False	NA	-9	True	AAGAAA	-12	NA	124045336	123995043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.61	chr8	-	5122	41	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	4	-5	intron_retention	FALSE	canonical	1	1	junction_6	28.6059434383836	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAATCTGTGTCTGGCCT	NA	False	NA	-10	True	AAGAAA	-11	NA	124045311	123995044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997052_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.62	chr8	-	3861	30	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	15	-2499	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	26.3718943824193	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAGAGACGAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	124045284	124007093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124008060_124009356_124009500_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.63	chr8	-	5912	28	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	-6	2924	intron_retention	FALSE	non_canonical	0	0	junction_7	41.049737304697	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGAGCATGCTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	124045305	124010003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018208_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024776_124026408_124026494_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.64	chr8	-	3449	27	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	4	2897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	35.8556647996499	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124045311	124010030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039873_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.65	chr8	-	2121	21	NNC	ENSMUSG00000032815.17	novel	895	6	NA	NA	15	-2754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5137673845758	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATAGTAAGATTATTT	NA	False	NA	NA	False	AGTAAA	-14	NA	124045284	124020889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124021205_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.66	chr8	-	2251	20	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	29	26263	13	-3166	5prime_fragment	FALSE	canonical	3	111	junction_17	12.9467265566187	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATTGACTCCAAATTAA	NA	False	NA	NA	False	NA	NA	NA	124045286	124021301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.67	chr8	-	3176	14	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	-27	34213	-27	-438	5prime_fragment	FALSE	canonical	3	111	junction_11	12.6645383865492	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTTGTTGGTTGCA	NA	False	NA	NA	False	AAAAAG	-26	NA	124045342	124029251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.68	chr8	-	799	5	NIC	ENSMUSG00000032815.17	novel	895	6	NA	NA	-21	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	62.2575296650935	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTGCATGTCTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	124045336	124039020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124039397_124039759_124039856_124043101_124043196_124044800_124044911_124045213
ES.34210.7	chr8	-	4433	25	ISM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	23381	-1671	-3334	1671	3prime_fragment	FALSE	canonical	3	94	junction_17	24.3991333520954	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCTGTTTCACCTCT	NA	False	NA	NA	False	TATAAA	-21	NA	124021934	123993367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870
ES.34210.8	chr8	-	4603	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	-22	-96	-22	96	multi-exon	FALSE	canonical	3	94	junction_17	20.5305065860605	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCATATGGCTGCTGG	NA	False	NA	92	True	NA	NA	NA	124045337	123994942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34210.9	chr8	-	4706	43	NNC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	0	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.648942471964	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGCCCAAGAGAGGTG	NA	False	NA	70	True	AATAAA	-33	NA	124045315	123994964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998227_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ES.34211.1	chr8	-	948	3	Antisense	novelGene_ENSMUSG00000010154.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACACCCTGTTTGCTCACT	NA	False	NA	NA	False	NA	NA	NA	124059513	124052936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_124053684_124056217_124056273_124059367
ES.34212.1	chr8	-	199	1	Intergenic	novelGene_27863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACCATTCTGTAAGAT	NA	False	NA	NA	False	NA	NA	NA	124093097	124092898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124092900_124093100
ES.34213.1	chr8	+	2982	18	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-285	2	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_16	149.00642098517	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACATGGTGATATGG	NA	False	NA	10	True	AAGAAA	-15	NA	124100206	124130547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126127_124127363_124127437_124129885
ES.34213.10	chr8	+	2592	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	-234	224	-164	179	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACCTGCATGTCATCT	NA	False	NA	NA	False	NA	NA	NA	124100327	124130321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ES.34213.11	chr8	+	2740	17	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-156	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	168.101717718767	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100335	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124127363_124127437_124129882
ES.34213.12	chr8	+	2510	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-148	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_18	141.81608677839	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGATCATCATCGG	NA	False	NA	8	True	AATAAA	-16	NA	124100343	124130141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814_124127929_124129885
ES.34213.13	chr8	+	2862	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-145	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	161.529571500502	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100346	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129543_124129600_124129885
ES.34213.16	chr8	+	5817	16	NIC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	-49	5	intron_retention	FALSE	canonical	3	455	junction_12	38.4940976716633	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100442	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124126084_124127363
ES.34213.17	chr8	+	5070	16	ISM	ENSMUSG00000001472.18	ENSMUST00000212470.2	2572	17	-71	25	-40	0	intron_retention	FALSE	canonical	1	1	junction_2	131.41395156781	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGTGATATGGCC	NA	False	NA	12	True	AAGAAA	-17	NA	124100451	124130549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124100804_124108138_124108301_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.18	chr8	+	5207	18	NIC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_6	168.476955186951	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100470	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124115491_124115577_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.19	chr8	+	4753	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-92	-1923	-21	5	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100470	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.2	chr8	+	2534	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-355	559	-284	102	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGTCTTTTGTTTTCC	NA	False	NA	25	True	NA	NA	NA	124100207	124128072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.21	chr8	+	2185	17	FSM	ENSMUSG00000001472.18	ENSMUST00000212569.2	1953	17	-132	-100	-12	100	multi-exon	FALSE	canonical	1	1	junction_2	148.36315243348	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCCGTGTCTTTTGTTTT	NA	False	NA	23	True	NA	NA	NA	124100479	124128070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.23	chr8	+	2273	18	NIC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	-8	99	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACCCGTGTCTTTTGTTT	NA	False	NA	22	True	NA	NA	NA	124100483	124128069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
ES.34213.24	chr8	+	2586	17	NIC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-8	5	combination_of_known_splicesites	FALSE	canonical	2	10	junction_15	148.802813628473	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100483	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124127363_124127437_124129888
ES.34213.25	chr8	+	4510	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	-78	-1694	-7	183	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCATGTCATCTCAAC	NA	False	NA	NA	False	NA	NA	NA	124100484	124130325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.26	chr8	+	5152	17	NNC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	1	5	intron_retention	FALSE	canonical	1	7	junction_16	127.6797752191	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100492	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126127_124127363
ES.34213.28	chr8	+	6092	16	NIC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-5	0	intron_retention	FALSE	canonical	3	455	junction_11	42.1259487199464	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100517	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.3	chr8	+	5336	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-329	-5	-226	5	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100265	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.30	chr8	+	2681	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	180.120407258898	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGTGATATGGCC	NA	False	NA	12	True	AAGAAA	-17	NA	124100529	124130549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124107620_124107684_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ES.34213.32	chr8	+	2728	19	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_18	139.6995011347	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100535	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814_124127929_124129888
ES.34213.35	chr8	+	2783	20	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	17	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	172.52467806936	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100539	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814_124127929_124129543_124129600_124129885
ES.34213.36	chr8	+	5243	17	NNC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	19	3	intron_retention	FALSE	canonical	1	1	junction_15	127.580841405557	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTGATATGGCCTTT	NA	False	NA	15	True	AAGAAA	-20	NA	124100541	124130552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124125818_124126084_124127363
ES.34213.37	chr8	+	5515	18	NNC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	-11	-2	intron_retention	FALSE	canonical	1	1	junction_15	191.017055706903	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACAAAAACATGGTGAT	NA	False	NA	6	True	AAGAAA	-11	NA	124100550	124130543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124126084_124126280_124126458_124127363_124127437_124127796
ES.34213.39	chr8	+	2222	18	NNC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	-11	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	147.691041023536	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCACCCGTGTCTTTTGT	NA	False	NA	20	True	NA	NA	NA	124100550	124128067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110219_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.40	chr8	+	4995	17	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_11	130.535854748801	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100554	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122332_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.42	chr8	+	4897	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-38	143	-5	-139	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGGCCCCTTTCCCAA	NA	False	NA	NA	False	NA	NA	NA	124100556	124130406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.43	chr8	+	2751	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	164.721697582076	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100559	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129324_124129492_124129885
ES.34213.44	chr8	+	2609	18	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.264520021389	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100561	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117496_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ES.34213.48	chr8	+	4672	18	NIC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	7	5	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100569	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
ES.34213.49	chr8	+	2230	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	192.144179725718	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	False	NA	9	True	AATAAA	-17	NA	124100570	124130142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116539_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129543_124129600_124129885
ES.34213.5	chr8	+	2433	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-187	403	-187	0	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	False	NA	9	True	AATAAA	-17	NA	124100304	124130142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ES.34213.53	chr8	+	3057	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	8	323	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_18	161.368157016077	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCAGCAATCACATTTC	NA	False	NA	NA	False	NA	NA	NA	124100570	124130897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796_124127929_124129885
ES.34213.54	chr8	+	2466	16	NIC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	8	99	intron_retention	FALSE	canonical	2	10	junction_15	128.025761296528	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACCCGTGTCTTTTGTTT	NA	False	NA	22	True	NA	NA	NA	124100570	124128069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124127363
ES.34213.55	chr8	+	2335	20	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	170.826863152477	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGTGGATCATCATCG	NA	False	NA	7	True	AATAAA	-15	NA	124100570	124130140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814_124127929_124129543_124129600_124129888
ES.34213.56	chr8	+	5936	16	NIC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	8	5	intron_retention	FALSE	canonical	3	455	junction_11	42.3988469444892	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100570	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.57	chr8	+	6594	15	NIC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	8	5	intron_retention	FALSE	canonical	3	455	junction_11	39.2371127939883	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100570	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124126084_124127363
ES.34213.58	chr8	+	3142	18	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	9	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	126.198942192003	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100571	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129324
ES.34213.59	chr8	+	4233	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	17	-1512	-15	1	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGATCATCATCGGGA	NA	False	NA	10	True	AATAAA	-18	NA	124100579	124130143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ES.34213.61	chr8	+	6251	16	NIC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-6	0	intron_retention	FALSE	canonical	3	455	junction_11	40.9387618550222	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100588	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.63	chr8	+	195	1	Intergenic	novelGene_27864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGATGTAACAGCTCATA	NA	False	NA	NA	False	NA	NA	NA	124104305	124104500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124104300_124104500
ES.34213.64	chr8	+	4452	17	NNC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	-21	-1	intron_retention	FALSE	canonical	0	0	junction_16	129.953582458315	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAAAACATGGTGATA	NA	False	NA	7	True	AAGAAA	-12	NA	124108181	124130544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124129596_124129888
ES.34213.66	chr8	+	4572	14	NNC	ENSMUSG00000001472.18	novel	5002	17	NA	NA	1440	0	intron_retention	FALSE	non_canonical	0	0	junction_5	139.373067954343	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	False	NA	9	True	AATAAA	-17	NA	124109642	124130142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118317_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.67	chr8	+	2104	15	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	9501	0	-1020	0	3prime_fragment	FALSE	canonical	3	124	junction_14	105.160421669534	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124110062	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ES.34213.69	chr8	+	1920	13	ISM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	14740	0	-69	0	3prime_fragment	FALSE	canonical	3	124	junction_12	112.730104182019	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124115301	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ES.34213.7	chr8	+	2835	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	-177	-9	-177	5	multi-exon	FALSE	canonical	3	129	junction_17	98.3685253625717	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124100314	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ES.34213.70	chr8	+	4378	12	ISM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	14707	-5	-69	5	3prime_fragment	FALSE	canonical	3	455	junction_7	42.3046800060374	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGATATGGCCTTTTT	NA	False	NA	17	True	AAGAAA	-22	NA	124115301	124130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.71	chr8	+	5043	8	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	4361	0	intron_retention	FALSE	canonical	0	0	junction_4	234.871219598993	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124119731	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124246_124124370_124124721_124124881_124125254_124126458_124127363
ES.34213.73	chr8	+	3424	1	NIC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	828	178	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTAACCTGCATGTCATC	NA	False	NA	NA	False	NA	NA	NA	124126896	124130320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124126900_124130300
ES.34213.74	chr8	+	3453	1	NIC	ENSMUSG00000001472.18	novel	2649	18	NA	NA	1024	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124127092	124130545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124127100_124130500
ES.34213.75	chr8	+	3394	1	Genic_Genomic	ENSMUSG00000001472.18	novel	NA	NA	NA	NA	1437	325	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCAATCACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	124127505	124130899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_124127500_124130900
ES.34213.8	chr8	+	4862	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	-267	407	-164	0	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGATCATCATCGGG	NA	False	NA	9	True	AATAAA	-17	NA	124100327	124130142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ES.34213.9	chr8	+	2652	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	-164	183	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	161.529571500502	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCATGTCATCTCAAC	NA	False	NA	NA	False	NA	NA	NA	124100327	124130325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129543_124129600_124129885
ES.34214.1	chr8	+	131	1	FSM	ENSMUSG00000074037.4	ENSMUST00000098324.4	3638	1	1728	1779	1728	-1779	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124135573	124135704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124135600_124135700
ES.34215.1	chr8	+	1898	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	-36	6	-36	-6	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCCTGGTATTGGAG	NA	False	NA	21	True	AATAAA	-21	NA	124138126	124148748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ES.34215.11	chr8	+	3082	12	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.7705702869626	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169715	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ES.34215.12	chr8	+	3177	13	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.5811715246523	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169721	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124169791_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.13	chr8	+	3225	12	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	82.1393695681788	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169721	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174431_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.14	chr8	+	3209	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	5	0	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169729	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.16	chr8	+	1884	13	NNC	ENSMUSG00000001482.16	novel	3214	13	NA	NA	-4	4185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	86.0678027293986	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAATACTATGTGTC	NA	False	NA	NA	False	NA	NA	NA	124169730	124194194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202_124188329_124193750
ES.34215.17	chr8	+	3226	14	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	110.780020841989	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTACTAGTCTGCCA	NA	False	NA	27	True	TATAAA	-16	NA	124169730	124190005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124169791_124172861_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.18	chr8	+	4035	13	NNC	ENSMUSG00000001482.16	novel	3214	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.492122410996	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169730	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124172009_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.2	chr8	+	293	1	Intergenic	novelGene_27867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	124146106	124146399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124146100_124146400
ES.34215.22	chr8	+	3218	13	NNC	ENSMUSG00000001482.16	novel	3214	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.887225179786	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGAAATGTTACTAGT	NA	False	NA	21	True	TATAAA	-10	NA	124169750	124189999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124172861_124172989_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.23	chr8	+	3352	15	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.354663563204	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169752	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124172028_124172151_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.24	chr8	+	4633	11	FSM	ENSMUSG00000001482.16	ENSMUST00000093049.10	1909	11	28	-2752	2	-3	multi-exon	FALSE	canonical	3	130	junction_1	55.0123622470441	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169752	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555
ES.34215.25	chr8	+	3399	13	NNC	ENSMUSG00000001482.16	novel	3214	13	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	101.119016784953	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169758	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124173586_124173893_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.26	chr8	+	2917	11	NIC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	89.0507720348341	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124169761	124190001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.27	chr8	+	3292	13	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.366224604021	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169761	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174055_124174258_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.28	chr8	+	3210	13	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.98655549535	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTTACTAGTCTGCC	NA	False	NA	26	True	TATAAA	-15	NA	124169761	124190004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174055_124174103_124174526_124174652_124175961_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.29	chr8	+	3466	14	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	112.892366396194	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGAAATGTTACTAGTC	NA	False	NA	22	True	TATAAA	-11	NA	124169762	124190000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124172836_124172924_124174049_124174349_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.3	chr8	+	174	1	Intergenic	novelGene_27868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	124146107	124146281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124146100_124146300
ES.34215.31	chr8	+	5543	14	NNC	ENSMUSG00000001482.16	novel	3191	12	NA	NA	49	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.06328490747	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169799	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124172151_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.32	chr8	+	3486	13	NNC	ENSMUSG00000001482.16	novel	3191	12	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.236776406197	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169881	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124170185_124172028_124172151_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.33	chr8	+	3439	14	NNC	ENSMUSG00000001482.16	novel	3191	12	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.092202002818	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124170022	124190001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124170185_124172013_124172151_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.34	chr8	+	3199	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	-1	-7	-1	-1	multi-exon	FALSE	canonical	3	18	junction_1	79.5842502795747	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTACTAGTCTGCCATTT	NA	False	NA	30	True	TATAAA	-19	NA	124170045	124190008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.35	chr8	+	3314	14	NIC	ENSMUSG00000001482.16	novel	3191	12	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	110.92142322463	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124170065	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124170185_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.36	chr8	+	5369	11	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-1025	0	intron_retention	FALSE	canonical	3	15	junction_1	82.0805092576794	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124172652	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124172924_124174055_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.37	chr8	+	1553	13	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-812	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	115.340678956829	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTATCCCTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	124172865	124187253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124187059
ES.34215.38	chr8	+	4804	14	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-794	1732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.06328490747	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCCAGCCAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	124172883	124191741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202_124191379_124191454
ES.34215.39	chr8	+	3192	13	NIC	ENSMUSG00000001482.16	novel	589	4	NA	NA	-112	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	99.7624957364016	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124173808	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124173893_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.4	chr8	+	200	2	Intergenic	novelGene_27869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAGAAACAGATGTTA	NA	False	NA	NA	False	NA	NA	NA	124146108	124176749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124146276_124176716
ES.34215.40	chr8	+	3233	13	NNC	ENSMUSG00000001482.16	novel	589	4	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	103.362999773721	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124173820	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124173893_124174055_124174156_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.41	chr8	+	4914	8	NIC	ENSMUSG00000001482.16	novel	1909	11	NA	NA	-73	-1	intron_retention	FALSE	canonical	3	200	junction_1	38.0815451581557	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTATCCCTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	124173847	124187253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124183273_124183409_124185171_124186255_124186397_124186555
ES.34215.42	chr8	+	3118	12	NIC	ENSMUSG00000001482.16	novel	359	4	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	83.9402581729933	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124173950	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124174008_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.43	chr8	+	3563	11	ISM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	3970	0	96	0	3prime_fragment	FALSE	canonical	3	200	junction_1	38.8612917953071	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124174016	124190001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.44	chr8	+	3265	12	NNC	ENSMUSG00000001482.16	novel	389	4	NA	NA	247	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1983097924229	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124174167	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124174375_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.45	chr8	+	4065	10	NIC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	603	-557	intron_retention	FALSE	canonical	3	200	junction_1	39.0738458831322	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGCTCCTGTCTTTCT	NA	False	NA	NA	False	CATAAA	-44	NA	124174523	124189444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.46	chr8	+	3663	8	NIC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	5565	0	intron_retention	FALSE	canonical	3	222	junction_7	33.8628687141391	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124179485	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124179634_124180967_124181110_124182152_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.48	chr8	+	2716	8	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	7080	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	102.321422338569	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124181000	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124181171_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.5	chr8	+	3154	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	-27	0	-27	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169697	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.50	chr8	+	4364	6	NIC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	7093	-3	intron_retention	FALSE	canonical	3	222	junction_5	35.1249199287344	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124181013	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124181110_124182152_124182318_124183144_124183273_124183409_124185171_124186255_124186666_124188202
ES.34215.51	chr8	+	2624	8	NNC	ENSMUSG00000001482.16	novel	3191	12	NA	NA	7110	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	101.31200545335	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124181030	124190001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185082_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.52	chr8	+	2681	8	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	7122	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	128.774918333644	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124181042	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124181171_124182152_124182318_124183144_124183273_124183409_124183524_124185082_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.6	chr8	+	3707	15	NNC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	128.902193581816	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTACTAGTCTGCCAT	NA	False	NA	28	True	TATAAA	-17	NA	124169708	124190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124173586_124173893_124174055_124174103_124174526_124174652_124176039_124176138_124177303_124177518_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34215.7	chr8	+	4793	13	NNC	ENSMUSG00000001482.16	novel	3214	13	NA	NA	-15	1725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	86.0678027293986	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTCTTTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	124169709	124191734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202_124191381_124191454
ES.34215.8	chr8	+	1923	11	FSM	ENSMUSG00000001482.16	ENSMUST00000093049.10	1909	11	-15	1	-15	-1	multi-exon	FALSE	canonical	3	130	junction_1	55.0123622470441	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTTATCCCTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	124169709	124187253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555
ES.34215.9	chr8	+	3276	14	FSM	ENSMUSG00000001482.16	ENSMUST00000108832.8	3242	14	-34	0	-15	0	multi-exon	FALSE	canonical	3	15	junction_2	108.849605816422	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169709	124190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124169791_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ES.34216.1	chr8	-	159	1	Intergenic	novelGene_27865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATTTAAAAT	7570	False	NA	NA	False	NA	NA	NA	124142228	124142069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124142100_124142200
ES.34217.1	chr8	-	133	1	Intergenic	novelGene_27866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9740	False	NA	NA	False	NA	NA	NA	124143186	124143053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124143100_124143200
ES.34218.1	chr8	-	138	1	Intergenic	novelGene_27870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	124166530	124166392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124166400_124166500
ES.34219.1	chr8	-	274	1	Intergenic	novelGene_27871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	124171711	124171437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124171400_124171700
ES.3422.1	chr10	-	2192	1	Intergenic	novelGene_2639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGCTGGGCTGGAGAGA	6652	False	NA	NA	False	NA	NA	NA	81979753	81977561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81977600_81979800
ES.3422.2	chr10	-	238	1	Intergenic	novelGene_2640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	8460	False	NA	NA	False	NA	NA	NA	81977945	81977707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_81977700_81977900
ES.34220.1	chr8	-	185	1	Intergenic	novelGene_27872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAATGAAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	124193455	124193270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124193300_124193500
ES.34221.1	chr8	+	2619	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	175.928074791944	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGAGTTTTGCC	7440	False	NA	15	True	TTTAAA	-19	NA	124204586	124230654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124230248
ES.34221.10	chr8	+	4933	15	NIC	ENSMUSG00000031967.16	novel	4111	16	NA	NA	-26	563	intron_retention	FALSE	canonical	3	631	junction_4	43.5984108491517	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7469	False	NA	16	True	ATTAAA	-19	NA	124204615	124228917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124228173_124228253_124228449_124228586
ES.34221.11	chr8	+	4206	27	Fusion	ENSMUSG00000031967.16_ENSMUSG00000040220.11	novel	4227	17	NA	NA	-25	-7	multi-exon	FALSE	canonical	0	0	junction_17	336.080974762978	581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTATATTCTCTGTCGT	7470	False	NA	0	True	AATGAA	-14	NA	124204616	124263382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586_124229055_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ES.34221.14	chr8	+	2525	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-18	560	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	176.790560674913	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACACGTCTCAGATAAG	7477	False	NA	13	True	ATTAAA	-16	NA	124204623	124228914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227950_124228173_124228253_124228449_124228586
ES.34221.19	chr8	+	4414	18	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	235.185754458781	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGAGTTTTGCC	7480	False	NA	15	True	TTTAAA	-19	NA	124204626	124230654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124211818_124211992_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.2	chr8	+	2544	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-55	1738	-55	563	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7440	False	NA	16	True	ATTAAA	-19	NA	124204586	124228917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.20	chr8	+	4266	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	179.276747917152	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATGGGAGTTTTGC	7480	False	NA	14	True	TTTAAA	-18	NA	124204626	124230653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216467_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.21	chr8	+	2386	16	FSM	ENSMUSG00000031967.16	ENSMUST00000098320.6	4111	16	-15	1740	-15	561	multi-exon	FALSE	canonical	3	9	junction_13	180.225291109643	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACGTCTCAGATAAGA	7480	False	NA	14	True	ATTAAA	-17	NA	124204626	124228915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124227971_124228173_124228253_124228449_124228586
ES.34221.22	chr8	+	3794	16	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-15	560	intron_retention	FALSE	canonical	3	631	junction_4	45.1779690655621	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACACGTCTCAGATAAG	7480	False	NA	13	True	ATTAAA	-16	NA	124204626	124228914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.23	chr8	+	4124	16	FSM	ENSMUSG00000031967.16	ENSMUST00000098320.6	4111	16	-15	2	-15	-2	multi-exon	FALSE	canonical	3	9	junction_13	180.225291109643	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATGGGAGTTTTGC	7480	False	NA	14	True	TTTAAA	-18	NA	124204626	124230653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124227971_124228173_124228253_124228449_124228586
ES.34221.24	chr8	+	5107	16	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-15	-5	intron_retention	FALSE	canonical	3	631	junction_4	45.4495568979745	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGTGTATGGGAGTTT	7480	False	NA	11	True	TTTAAA	-15	NA	124204626	124230650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.25	chr8	+	5561	16	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-14	0	intron_retention	FALSE	canonical	3	631	junction_4	43.1295722213889	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	7481	False	NA	16	True	TTTAAA	-20	NA	124204627	124230655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.26	chr8	+	2543	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-14	561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	179.417449245468	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACGTCTCAGATAAGA	7481	False	NA	14	True	ATTAAA	-17	NA	124204627	124228915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211299_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.28	chr8	+	4208	15	ISM	ENSMUSG00000031967.16	ENSMUST00000098320.6	4111	16	-14	55	-14	-55	intron_retention	FALSE	canonical	3	9	junction_13	183.753953171415	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTGTAAAGTGTAC	7481	False	NA	-39	True	NA	NA	NA	124204627	124230600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124227971_124228173_124228253
ES.34221.29	chr8	+	3436	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-13	804	-13	-804	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTGTTGTGGACTTG	7482	False	NA	NA	False	NA	NA	NA	124204628	124229851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.3	chr8	+	4270	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-38	-5	-38	5	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGTTTTGCCTGTATG	7457	False	NA	21	True	TTTAAA	-25	NA	124204603	124230660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.30	chr8	+	2468	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-6	558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	177.34108202839	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAACACACGTCTCAGATA	7489	False	NA	11	True	ATTAAA	-14	NA	124204635	124228912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228427_124228586
ES.34221.32	chr8	+	5779	14	NIC	ENSMUSG00000031967.16	novel	4111	16	NA	NA	-3	562	intron_retention	FALSE	canonical	3	631	junction_4	45.1009387325387	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACGTCTCAGATAAGAC	7492	False	NA	15	True	ATTAAA	-18	NA	124204638	124228916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124221671_124225326_124228173_124228253_124228449_124228586
ES.34221.35	chr8	+	2516	17	NNC	ENSMUSG00000031967.16	novel	674	6	NA	NA	209	560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.419700146292	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACACGTCTCAGATAAG	7741	False	NA	13	True	ATTAAA	-16	NA	124204887	124228914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124205032_124207056_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.36	chr8	+	1944	12	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	9455	1740	-5603	561	3prime_fragment	FALSE	canonical	3	667	junction_3	34.0274560993772	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACGTCTCAGATAAGA	NA	False	NA	14	True	ATTAAA	-17	NA	124214096	124228915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.37	chr8	+	2874	7	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	15924	53	866	-53	3prime_fragment	FALSE	canonical	3	692	junction_2	30.5377726030494	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTGTAAAGTGTACAT	NA	False	NA	-37	True	NA	NA	NA	124220565	124230602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.38	chr8	+	2404	1	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	426	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGGGAGTTTTGCC	NA	False	NA	15	True	TTTAAA	-19	NA	124228250	124230654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124228200_124230700
ES.34221.39	chr8	+	4733	1	Antisense	novelGene_ENSMUSG00000031970.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCCGGCGTAG	2713	False	NA	NA	False	NA	NA	NA	124234208	124238941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_124234200_124238900
ES.34221.4	chr8	+	1306	8	ISM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	-35	13629	-35	349	5prime_fragment	FALSE	canonical	3	631	junction_4	49.623891546763	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	7460	False	NA	NA	False	NA	NA	NA	124204606	124217026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493
ES.34221.40	chr8	+	1652	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	28	1	6	-1	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGTCGTTGTGAG	NA	False	NA	6	True	AATGAA	-20	NA	124245600	124263388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ES.34221.41	chr8	+	3456	10	FSM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	16	-3	16	3	multi-exon	FALSE	canonical	3	26	junction_4	6.02668960992027	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTGATCATGTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	124245610	124262148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991
ES.34221.42	chr8	+	2561	10	NNC	ENSMUSG00000040220.11	novel	1681	11	NA	NA	28	-1	intron_retention	FALSE	canonical	0	0	junction_4	12.2746350930146	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGTCGTTGTGAG	NA	False	NA	6	True	AATGAA	-20	NA	124245622	124263388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124245692_124247342_124247430_124249676_124251024_124252357_124252402_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ES.34221.5	chr8	+	3721	16	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-32	563	intron_retention	FALSE	canonical	3	663	junction_4	39.2521195464511	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGTCTCAGATAAGACC	7463	False	NA	16	True	ATTAAA	-19	NA	124204609	124228917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.8	chr8	+	2427	16	NIC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-27	560	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	184.450848617065	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACACGTCTCAGATAAG	7468	False	NA	13	True	ATTAAA	-16	NA	124204614	124228914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124204787_124207087_124207176_124207809_124207885_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ES.34221.9	chr8	+	5330	17	NNC	ENSMUSG00000031967.16	novel	4227	17	NA	NA	-26	8295	intron_retention	FALSE	canonical	0	0	junction_16	177.34108202839	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGCGTAGTGGTGCATA	7469	False	NA	NA	False	NA	NA	NA	124204615	124238950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124235804
ES.34222.1	chr8	-	119	1	FSM	ENSMUSG00000118798.1	ENSMUST00000240027.1	119	1	1	-1	1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGACTCCCCTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	124282619	124282500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124282500_124282600
ES.34223.1	chr8	-	147	1	Intergenic	novelGene_27873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTAAGGGGAAAAAAAAG	7841	False	NA	NA	False	NA	NA	NA	124362152	124362005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124362000_124362200
ES.34224.1	chr8	-	151	1	Intergenic	novelGene_27874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124371483	124371332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124371300_124371500
ES.34225.1	chr8	+	175	1	Intergenic	novelGene_27875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124371727	124371902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124371700_124371900
ES.34226.1	chr8	-	239	1	Intergenic	novelGene_27876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGAGTACCGTAC	NA	False	NA	NA	False	AAAAAG	-44	NA	124372869	124372630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124372600_124372900
ES.34227.1	chr8	+	3513	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-143	1	-143	-1	multi-exon	FALSE	canonical	3	44	junction_2	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTTGCTTATTCTAC	NA	False	NA	7	True	AATAAA	-19	NA	124380524	124390622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124380956_124382230_124382290_124387599
ES.34227.2	chr8	+	2768	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-115	718	-115	-718	multi-exon	FALSE	canonical	3	44	junction_2	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGAAATGAGCATTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	124380552	124389905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124380956_124382230_124382290_124387599
ES.34227.3	chr8	+	5891	1	Genic_Genomic	ENSMUSG00000039960.6	novel	NA	NA	NA	NA	-114	3720	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGTTCCTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	124380553	124386444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_124380600_124386400
ES.34227.4	chr8	+	2507	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-106	970	-106	-970	multi-exon	FALSE	canonical	3	44	junction_2	0.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTATATGAACTGTTTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	124380561	124389653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124380956_124382230_124382290_124387599
ES.34227.5	chr8	+	3418	4	NNC	ENSMUSG00000039960.6	novel	3371	3	NA	NA	-100	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.9814733091416	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCTCTTGCTTATTCT	NA	False	NA	5	True	AATAAA	-17	NA	124380567	124390620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124380765_124380814_124380956_124382230_124382290_124387599
ES.34227.6	chr8	+	1029	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	-80	2422	-80	-2422	multi-exon	FALSE	canonical	3	44	junction_2	0.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGAAAGTTACATTT	NA	False	NA	NA	False	NA	NA	NA	124380587	124388201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124380956_124382230_124382290_124387599
ES.34227.7	chr8	+	838	2	FSM	ENSMUSG00000039960.6	ENSMUST00000136615.2	782	2	-74	18	-74	-18	multi-exon	FALSE	canonical	3	45	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-25	NA	124380593	124382706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124380956_124382230
ES.34227.8	chr8	+	6226	1	NIC	ENSMUSG00000039960.6	novel	3371	3	NA	NA	3724	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCTGCTCTTGCTTAT	NA	False	NA	2	True	AATAAA	-14	NA	124384391	124390617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124384400_124390600
ES.34228.1	chr8	-	196	1	Intergenic	novelGene_27877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	124522794	124522598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124522600_124522800
ES.34229.1	chr8	+	1858	8	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	-471	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.435483721121	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCCTGCTCTGTGCA	NA	False	NA	18	True	AATAAA	-27	NA	124532252	124562032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.10	chr8	+	1383	8	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_5	95.0574477216117	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532743	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557110_124559541_124559638_124560753_124560887_124561432
ES.34229.11	chr8	+	3777	7	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	20	1	intron_retention	FALSE	canonical	3	53	junction_4	123.757042448321	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532743	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124559638_124560753_124560887_124561432
ES.34229.13	chr8	+	4319	6	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	24	1	intron_retention	FALSE	canonical	3	53	junction_4	134.914194953682	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532747	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124559638_124560753
ES.34229.14	chr8	+	1261	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	25	133	25	-133	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCAGTGCGTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	124532748	124561893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.15	chr8	+	2831	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	26	-1438	26	1438	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCATTTTAGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	124532749	124563464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.16	chr8	+	1025	8	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	26	160	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	134.59569086713	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGCACTCAGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	124532749	124561713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557110_124559541_124559638_124560753_124560887_124561432
ES.34229.17	chr8	+	4769	7	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	26	2	intron_retention	FALSE	canonical	3	53	junction_3	143.630022395505	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACTGTCCTGCTCTG	NA	False	NA	14	True	AATAAA	-23	NA	124532749	124562028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124532906_124550552_124554178_124555734_124555798_124557009_124557110_124559541_124559638_124560753_124560887_124561432
ES.34229.18	chr8	+	1074	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	30	315	30	158	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTGCACTCAGTGAG	NA	False	NA	NA	False	NA	NA	NA	124532753	124561711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.2	chr8	+	1485	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	-60	-6	-60	6	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCCTGCTCTGTGCA	NA	False	NA	18	True	AATAAA	-27	NA	124532663	124562032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.20	chr8	+	1897	7	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	31	1	intron_retention	FALSE	canonical	0	0	junction_5	169.222486685428	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532754	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753
ES.34229.21	chr8	+	1330	8	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	134.59569086713	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACAGTACACTGTCCTG	NA	False	NA	9	True	AATAAA	-18	NA	124532754	124562023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557110_124559541_124559638_124560753_124560887_124561432
ES.34229.22	chr8	+	3016	6	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	31	4	intron_retention	FALSE	canonical	0	0	junction_5	180.232516489117	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	False	NA	16	True	AATAAA	-25	NA	124532754	124562030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541
ES.34229.23	chr8	+	1307	8	NNC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	33	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	171.592064894312	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACACTGTCCTGCTCTGT	NA	False	NA	15	True	AATAAA	-24	NA	124532756	124562029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561514
ES.34229.24	chr8	+	1705	5	NIC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	41	-3	intron_retention	FALSE	canonical	0	0	junction_3	178.890154843692	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACAGTACACTGTCCTG	NA	False	NA	9	True	AATAAA	-18	NA	124532764	124562023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124557009_124557127_124559541_124559638_124560753
ES.34229.25	chr8	+	176	1	Intergenic	novelGene_27878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGAGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	124536310	124536486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124536300_124536500
ES.34229.26	chr8	+	4451	2	NIC	ENSMUSG00000019478.18	novel	640	6	NA	NA	2390	-2	intron_retention	FALSE	canonical	3	348	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACAGTACACTGTCCTGC	NA	False	NA	10	True	AATAAA	-19	NA	124556457	124562024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124559638_124560753
ES.34229.3	chr8	+	1217	6	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	-19	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	173.043809481877	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGCACAGTACACTGTCC	NA	False	NA	7	True	AATAAA	-16	NA	124532704	124562021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124557009_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.4	chr8	+	3091	6	ISM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	-9	-1	-9	1	intron_retention	FALSE	canonical	0	0	junction_5	156.065370918728	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532714	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541
ES.34229.6	chr8	+	1253	7	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	168.923799388955	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTACACTGTCCTGCT	NA	False	NA	11	True	AATAAA	-20	NA	124532735	124562025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
ES.34229.7	chr8	+	1952	7	FSM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	-69	-803	14	1	multi-exon	FALSE	canonical	0	0	junction_5	143.451211218309	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532737	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753
ES.34229.8	chr8	+	1273	7	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	14	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	181.099420208901	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACACTGTCCTGCTCT	NA	False	NA	13	True	AATAAA	-22	NA	124532737	124562027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124561432
ES.3423.1	chr10	+	2249	2	Intergenic	novelGene_2641	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAAAGT	9537	False	NA	NA	False	NA	NA	NA	82006596	82008901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82007615_82007670
ES.34230.1	chr8	-	158	1	Intergenic	novelGene_27879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124542079	124541921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124541900_124542100
ES.34231.1	chr8	-	3226	3	FSM	ENSMUSG00000031971.16_ENSMUSG00000085030.2	ENSMUST00000034452.12	2390	3	22	-858	22	858	multi-exon	FALSE	canonical	3	74	junction_2	2	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCCAGCTTGGCTACAA	NA	False	NA	NA	False	ATTAAA	-18	NA	124586247	124566711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124569258_124571918_124572185_124585833
ES.34231.2	chr8	-	3118	3	FSM	ENSMUSG00000031971.16_ENSMUSG00000085030.2	ENSMUST00000034452.12	2390	3	28	-756	28	756	multi-exon	FALSE	canonical	3	74	junction_2	2	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACCTGATTTTAAGG	NA	False	NA	NA	False	AATAAA	-18	NA	124586241	124566813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124569258_124571918_124572185_124585833
ES.34231.3	chr8	-	2412	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	-4	-18	-4	18	multi-exon	FALSE	canonical	3	74	junction_2	2	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGTTAACTACATAGT	NA	False	NA	NA	False	ATTAAA	-44	NA	124586273	124567551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124569258_124571918_124572185_124585833
ES.34231.4	chr8	-	2452	3	NNC	ENSMUSG00000031971.16	novel	2390	3	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGCCTTGCTAGTGA	NA	False	NA	NA	False	ATTAAA	-23	NA	124586251	124567572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124569258_124571835_124572185_124585833
ES.34232.1	chr8	+	859	1	Antisense	novelGene_ENSMUSG00000031971.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACCTGGTGCAAATGTT	1060	False	NA	NA	False	NA	NA	NA	124586388	124587247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_124586400_124587200
ES.34233.1	chr8	-	150	1	Intergenic	novelGene_27880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	124589504	124589354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124589400_124589500
ES.34234.1	chr8	-	179	1	Intergenic	novelGene_27881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTGAACCACAGAAC	NA	False	NA	NA	False	NA	NA	NA	124596360	124596181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124596200_124596400
ES.34235.1	chr8	+	177	1	Intergenic	novelGene_27882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	124597544	124597721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124597500_124597700
ES.34236.1	chr8	-	178	1	Intergenic	novelGene_27883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	124598393	124598215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124598200_124598400
ES.34237.1	chr8	+	189	1	Intergenic	novelGene_27884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGGAAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	124603066	124603255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124603100_124603300
ES.34238.1	chr8	+	157	1	ISM	ENSMUSG00000110547.2	ENSMUST00000212751.2	1895	2	3729	462	3729	-462	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124626740	124626897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124626700_124626900
ES.34239.1	chr8	+	173	1	Intergenic	novelGene_27885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCTGGGATTAC	NA	False	NA	NA	False	NA	NA	NA	124670136	124670309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124670100_124670300
ES.3424.1	chr10	-	213	1	Intergenic	novelGene_2642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTATTATTCTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	82012131	82011918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82011900_82012100
ES.34240.1	chr8	+	1486	1	NIC	ENSMUSG00000110615.2	novel	1026	2	NA	NA	63	-2447	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	124675591	124677077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124675600_124677100
ES.34240.2	chr8	+	3459	1	Genic_Genomic	ENSMUSG00000110615.2	novel	NA	NA	NA	NA	-8	85	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAAAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	124676150	124679609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_124676200_124679600
ES.34240.3	chr8	+	3154	2	NNC	ENSMUSG00000110615.2	novel	1052	3	NA	NA	0	100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAATTCATATTCATTA	NA	False	NA	NA	False	NA	NA	NA	124676158	124679624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124677459_124677770
ES.34241.1	chr8	+	1463	6	Genic_Genomic	ENSMUSG00000110615.2	novel	1052	3	NA	NA	2738	4588	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAGTAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	124681999	124690262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_124682036_124682130_124682563_124685244_124685418_124686947_124687032_124688737_124688945_124689731
ES.34242.1	chr8	+	176	1	Intergenic	novelGene_27887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	124691981	124692157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124692000_124692200
ES.34243.1	chr8	+	179	1	Intergenic	novelGene_27888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124700683	124700862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124700700_124700900
ES.34244.1	chr8	+	1878	2	Antisense	novelGene_ENSMUSG00000031974.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCCTGTTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	124705683	124708896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_124705815_124707149
ES.34245.1	chr8	-	10642	22	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-1	-327	intron_retention	TRUE	canonical	3	328	junction_10	45.2700638922374	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCCCCTGTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	124676005	124624188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124644292_124645510_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.10	chr8	-	3646	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	90.1285837012876	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124675996	124626022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645503_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.11	chr8	-	3422	25	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	8	-2161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	91.9772012813804	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124675986	124626022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124660164_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.12	chr8	-	3555	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	3	-2161	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	88.8092134234331	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124676001	124626022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.13	chr8	-	3679	27	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-3	-2161	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	114.807357298828	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTCTGTTTTGTCTG	NA	False	NA	-1	True	ATTAAA	-39	NA	124675997	124626022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675493_124675533_124675736
ES.34245.17	chr8	-	3651	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-3	-2164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.5069579185727	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAAGTCTGTTTTGT	NA	False	NA	-4	True	ATTAAA	-36	NA	124675997	124626025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629441_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.19	chr8	-	3677	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-22	-2165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	90.0017422053596	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGAAGTCTGTTTTG	NA	False	NA	-5	True	ATTAAA	-35	NA	124676026	124626026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641224_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.2	chr8	-	5469	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	7	332	-3	-332	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCTCAGCCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	124675997	124624193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.20	chr8	-	2720	21	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	11364	-2165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	131.262894604683	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGAAGTCTGTTTTG	NA	False	NA	-5	True	ATTAAA	-35	NA	124664630	124626026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656086_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664593
ES.34245.22	chr8	-	5111	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-15	-2166	intron_retention	FALSE	canonical	3	328	junction_14	43.7089489947107	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACCTGAAGTCTGTTTT	NA	False	NA	-6	True	ATTAAA	-34	NA	124676019	124626027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.27	chr8	-	3640	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-12	-2176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	90.1285837012876	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTCTGGATCAACCTGA	NA	False	NA	-16	True	ATTAAA	-24	NA	124676016	124626037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644283_124645505_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.29	chr8	-	3558	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-1	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	116.693142900515	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675995	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641362_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656086_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.3	chr8	-	4461	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	28	1319	18	-1319	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATATATATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	124675976	124625180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.30	chr8	-	3645	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.0434074760853	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675996	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631378_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.32	chr8	-	3659	27	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.163990442149	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675996	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634175_124634267_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656086_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.33	chr8	-	3614	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2177	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	88.7089082336154	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675996	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641362_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.35	chr8	-	3622	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	26	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	90.0944926174736	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675968	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667909_124670993_124671098_124673231_124673351_124675736
ES.34245.36	chr8	-	5474	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2177	intron_retention	FALSE	canonical	3	328	junction_13	43.3307691549037	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675996	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.37	chr8	-	3825	27	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-12	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	115.703309879881	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124676016	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664593_124664776_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.4	chr8	-	3949	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-14	1873	-14	-1873	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCTATGGGCTGAGCAAG	NA	False	NA	NA	False	AATATA	-42	NA	124676018	124625734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.42	chr8	-	6741	14	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-15047	-2177	intron_retention	FALSE	canonical	3	328	junction_12	47.8822520269421	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	6000	False	NA	-17	True	ATTAAA	-23	NA	124657421	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124649252_124653868_124653961_124655982
ES.34245.43	chr8	-	3611	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-3	-2177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.80697269922	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124675997	124626038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626237_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.48	chr8	-	7292	4	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	2212	-2183	intron_retention	FALSE	canonical	3	448	junction_3	6.59966329107444	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTAGGTCTGGATC	NA	False	NA	-23	True	ATTAAA	-17	NA	124640162	124626044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124634614_124636622_124636759_124638487
ES.34245.49	chr8	-	3538	27	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-3	-2183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	87.8902371539766	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTAGGTCTGGATC	NA	False	NA	-23	True	ATTAAA	-17	NA	124675997	124626044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642021_124642100_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.5	chr8	-	2671	4	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	7817	-1879	intron_retention	FALSE	canonical	3	464	junction_1	8.04155872120988	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAACGTTCTATGGGCTG	4781	False	NA	NA	False	AATATA	-36	NA	124634557	124625740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124631356_124632952_124633034_124634494
ES.34245.51	chr8	-	4458	15	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-14234	-2183	intron_retention	FALSE	canonical	0	0	junction_7	116.405453445432	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTAGGTCTGGATC	6813	False	NA	-23	True	ATTAAA	-17	NA	124656608	124626044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641300_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982
ES.34245.53	chr8	-	3397	24	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-2	-2184	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	93.6042629052035	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAACTTAGGTCTGGAT	NA	False	NA	-24	True	ATTAAA	-16	NA	124675996	124626045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.55	chr8	-	2620	17	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-14073	-2185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	146.280552364284	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAACTTAGGTCTGGA	6974	False	NA	-25	True	ATTAAA	-15	NA	124656447	124626046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124638782_124638901_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982
ES.34245.56	chr8	-	3601	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	5	-2185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	90.0017422053596	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAACTTAGGTCTGGA	NA	False	NA	-25	True	ATTAAA	-15	NA	124675989	124626046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641243_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.57	chr8	-	2477	18	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	-15339	-2185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	142.09266434097	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAAACTTAGGTCTGGA	5708	False	NA	-25	True	ATTAAA	-15	NA	124657713	124626046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124644633_124644797_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594
ES.34245.6	chr8	-	3797	26	NNC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	113	-1879	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	88.7089082336154	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAACGTTCTATGGGCTG	NA	False	NA	NA	False	AATATA	-36	NA	124675881	124625740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641362_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.61	chr8	-	3524	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-1	2285	-1	-2285	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGAGTATTATGTCC	NA	False	NA	-125	True	NA	NA	NA	124676005	124626146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.62	chr8	-	4933	8	NIC	ENSMUSG00000039509.9	novel	2939	14	NA	NA	826	-10925	intron_retention	FALSE	canonical	3	350	junction_2	14.9065113837092	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGTGCTCTACTTTTAT	NA	False	NA	NA	False	NA	NA	NA	124675168	124657499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124667882_124670993_124671098_124673231
ES.34245.63	chr8	-	1218	4	ISM	ENSMUSG00000039509.9	ENSMUST00000212133.2	2939	14	5	20565	5	-20565	5prime_fragment	FALSE	canonical	3	373	junction_1	20.4613456709637	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	124675989	124667139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.7	chr8	-	3568	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	0	-2159	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	86.269190699165	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCTGTTTTGTCTGCA	NA	False	NA	1	True	ATTAAA	-41	NA	124676004	124626020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34245.8	chr8	-	3721	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	-73	2160	-73	-2160	multi-exon	FALSE	canonical	3	328	junction_14	43.1434815470425	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTGTTTTGTCTGC	NA	False	NA	0	True	ATTAAA	-40	NA	124676077	124626021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ES.34246.1	chr8	-	4225	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	81	0	81	0	multi-exon	TRUE	canonical	3	39	junction_3	9.48536885008813	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	6958	False	NA	0	True	ATTAAA	-18	NA	124709780	124679197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ES.34246.4	chr8	-	4213	12	NIC	ENSMUSG00000031974.9	novel	4306	13	NA	NA	237	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	7.03004179242953	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCTGTGTGTTA	7114	False	NA	-3	True	ATTAAA	-15	NA	124709624	124679200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ES.34246.5	chr8	-	3857	12	NIC	ENSMUSG00000031974.9	novel	4306	13	NA	NA	235	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.4148700244267	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGTGTCTGTGTGTT	7112	False	NA	-4	True	ATTAAA	-14	NA	124709626	124679201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ES.34246.6	chr8	-	3416	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	267	623	267	-623	multi-exon	FALSE	canonical	3	39	junction_3	9.48536885008813	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCAGCCAGCGCTTGA	7144	False	NA	NA	False	AAAAAG	-28	NA	124709594	124679820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ES.34246.7	chr8	-	3997	12	NNC	ENSMUSG00000031974.9	novel	4306	13	NA	NA	268	-1108	intron_retention	TRUE	non_canonical	0	0	junction_1	15.9720830831964	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCATTTTAAATATGTGA	7145	False	NA	NA	False	NA	NA	NA	124709593	124680305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124682039_124682133_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ES.34246.8	chr8	-	172	1	Intergenic	novelGene_27886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAGGAGACAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	124684654	124684482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124684500_124684700
ES.34247.1	chr8	+	160	1	Intergenic	novelGene_27889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATCTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	124712050	124712210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124712000_124712200
ES.34247.2	chr8	+	490	1	Intergenic	novelGene_27890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	124712051	124712541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124712100_124712500
ES.34248.1	chr8	-	160	1	Intergenic	novelGene_27891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATTAAAAAA	3850	False	NA	NA	False	NA	NA	NA	124718127	124717967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124718000_124718100
ES.34249.1	chr8	+	6187	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-376	5	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGCTGGGTAGACATA	NA	False	NA	26	True	AATAAA	-30	NA	124747870	124775249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.10	chr8	+	6118	10	NNC	ENSMUSG00000031976.15	novel	5853	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	55.7323852480055	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTATTCTGCTGGGTAG	NA	False	NA	21	True	AATAAA	-25	NA	124748231	124775244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748563_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.11	chr8	+	8505	6	ISM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	-15	7474	-15	-7474	intron_retention	FALSE	canonical	2	9	junction_5	54.7028335646336	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAAAGAATTAAG	NA	False	NA	NA	False	NA	NA	NA	124748231	124767769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761915_124763374
ES.34249.12	chr8	+	6088	10	FSM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	-14	-1	-14	0	multi-exon	FALSE	canonical	2	9	junction_5	56.6139188050884	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTATTCTGCTGGGTAG	NA	False	NA	21	True	AATAAA	-25	NA	124748232	124775244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761915_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.14	chr8	+	13802	4	ISM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	-6	7466	-6	-7466	intron_retention	FALSE	canonical	3	104	junction_1	23.7627158941622	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATTAAGGAGCCGAT	NA	False	NA	NA	False	NA	NA	NA	124748240	124767777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597
ES.34249.15	chr8	+	2753	9	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-4	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	62.4379692174561	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCACATAGTATTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	124748242	124775237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.16	chr8	+	5798	11	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.3348027421771	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGTATTCTGCTGGGT	NA	False	NA	19	True	AATAAA	-23	NA	124748242	124775242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847_124774264_124774554
ES.34249.17	chr8	+	5513	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-3	-593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.5195968020675	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATGAATTTAATGGAAAA	NA	False	NA	5	True	AATAAA	-17	NA	124748243	124774650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748547_124750198_124750338_124751777_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.18	chr8	+	5516	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	1	-585	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	55.7323852480055	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGGAAAATTCCTGAC	NA	False	NA	13	True	AATAAA	-25	NA	124748247	124774658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748563_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.19	chr8	+	5116	11	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	4	-561	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	56.3348027421771	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGTACCTAATGTGGT	NA	False	NA	37	True	NA	NA	NA	124748250	124774682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847_124774194_124774598
ES.34249.2	chr8	+	6448	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-355	6	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCTGGGTAGACATAG	NA	False	NA	27	True	AATAAA	-31	NA	124747891	124775250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.21	chr8	+	6363	11	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5181536910886	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATAGTATTCTGCTGGG	NA	False	NA	18	True	AATAAA	-22	NA	124748261	124775241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748547_124749430_124749725_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.22	chr8	+	4595	7	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	37	-9931	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	25.1578350949891	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTAAAGTAAAGAAAGC	NA	False	NA	NA	False	AATAAA	-12	NA	124748283	124765312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899
ES.34249.23	chr8	+	5784	9	FSM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	64	5	64	-4	multi-exon	FALSE	canonical	3	115	junction_1	25.7533371623951	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATAGTATTCTGCTG	NA	False	NA	16	True	AATAAA	-20	NA	124750196	124775239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.24	chr8	+	5470	7	ISM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	4463	3	4463	-2	3prime_fragment	FALSE	canonical	3	158	junction_1	18.2460041287583	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATAGTATTCTGCTGGG	NA	False	NA	18	True	AATAAA	-22	NA	124754595	124775241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.25	chr8	+	4914	8	NNC	ENSMUSG00000031976.15	novel	5853	9	NA	NA	4675	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.0306049272294	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATAGTATTCTGCTG	NA	False	NA	16	True	AATAAA	-20	NA	124754807	124775239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847_124774187_124774528
ES.34249.26	chr8	+	4290	7	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	5639	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.9677863611379	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124755771	124775243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124757929_124761766_124761922_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.27	chr8	+	2172	7	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	7747	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.9677863611379	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124757879	124775243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124757929_124761766_124761912_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.3	chr8	+	5579	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-328	-554	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	48.5083676121457	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAATGTGGTCCTTTCT	NA	False	NA	44	True	NA	NA	NA	124747918	124774689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.4	chr8	+	5973	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-39	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.3423169657904	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGCTGGGTAGACATA	NA	False	NA	26	True	AATAAA	-30	NA	124748207	124775249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748266_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763609_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.5	chr8	+	6241	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.9352833377341	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATAGTATTCTGCTGGG	NA	False	NA	18	True	AATAAA	-22	NA	124748214	124775241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748547_124750201_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771689_124771958_124773847
ES.34249.6	chr8	+	5839	10	NNC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.8167465388241	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATAGTATTCTGCTG	NA	False	NA	16	True	AATAAA	-20	NA	124748225	124775239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124748266_124750198_124750338_124751777_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.7	chr8	+	5549	10	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-19	-556	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	31.2552217859494	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTAATGTGGTCCTTT	NA	False	NA	42	True	NA	NA	NA	124748227	124774687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ES.34249.8	chr8	+	4635	7	ISM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	-16	9931	-16	-9931	5prime_fragment	FALSE	canonical	2	9	junction_5	54.5631642125792	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTAAAGTAAAGAAAGC	NA	False	NA	NA	False	AATAAA	-12	NA	124748230	124765312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761915_124763374_124763486_124764899
ES.34249.9	chr8	+	5193	8	NIC	ENSMUSG00000031976.15	novel	6073	10	NA	NA	-16	-6624	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	32.4332910347831	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCGAACTAAGGTGATGT	NA	False	NA	NA	False	AGTAAA	-2	NA	124748230	124768619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904
ES.3425.1	chr10	-	2354	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	-10	-309	-3	309	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGATTGGTGTGGTCTC	NA	False	NA	NA	False	NA	NA	NA	82077117	82060374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
ES.3425.2	chr10	-	14437	2	NIC	ENSMUSG00000062931.16	novel	2124	4	NA	NA	2061	281	intron_retention	FALSE	canonical	3	139	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTAGGGTACTTGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	82075046	82060402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82063426_82063632
ES.3425.3	chr10	-	2134	6	NNC	ENSMUSG00000062931.16	novel	2124	4	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.6216685406307	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTTGTCATTATTT	NA	False	NA	NA	False	NA	NA	NA	82077126	82060680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82061613_82061801_82062428_82063278_82063426_82063632_82063760_82072440_82072621_82077004
ES.3425.4	chr10	-	2227	5	NNC	ENSMUSG00000062931.16	novel	2035	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	54.3438128953058	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTTGTCATTATT	NA	False	NA	NA	False	NA	NA	NA	82077117	82060681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82062428_82063364_82063426_82063632_82063760_82072440_82072621_82077004
ES.3425.5	chr10	-	446	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	13408	1515	13401	-1515	3prime_fragment	FALSE	canonical	2	18	junction_1	60.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTCCTGTCCGTCCTG	NA	False	NA	NA	False	NA	NA	NA	82063706	82062202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_82062428_82063278_82063426_82063632
ES.3425.6	chr10	-	404	3	ISM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	-12	2583	-12	-2583	5prime_fragment	FALSE	canonical	3	139	junction_1	4.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTGAGGAGTTTTAA	NA	False	NA	-26	True	NA	NA	NA	82077126	82063270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_82063426_82063632_82063760_82077004
ES.34250.1	chr8	-	6131	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-24	-3134	-24	3134	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAATTCCTTTCTACAA	3681	False	NA	NA	False	NA	NA	NA	124748160	124719922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
ES.34250.11	chr8	-	3148	5	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	238.323703185394	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4157	False	NA	44	True	ATTAAA	-23	NA	124747684	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730732_124734929_124735035_124736427_124736573_124747599
ES.34250.12	chr8	-	2906	6	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-37	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.48818918001	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4057	False	NA	44	True	ATTAAA	-23	NA	124747784	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599_124747695_124747745
ES.34250.14	chr8	-	3067	5	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-81	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	246.752279624728	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4013	False	NA	44	True	ATTAAA	-23	NA	124747828	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124735035_124736361_124736573_124747599
ES.34250.15	chr8	-	3837	5	NNC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	-175	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	267.302730999891	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	3530	False	NA	44	True	ATTAAA	-23	NA	124748311	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729034_124730441_124734929_124735035_124736427_124736573_124747927
ES.34250.16	chr8	-	4394	4	NIC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-81	8	intron_retention	FALSE	canonical	3	323	junction_3	132.007575540194	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4013	False	NA	44	True	ATTAAA	-23	NA	124747828	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124724846_124729715_124730441_124734929_124736573_124747599
ES.34250.17	chr8	-	2881	5	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	10308	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	259.616544156955	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTGGCATCTT	NA	False	NA	37	True	ATTAAA	-16	NA	124737371	124723055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124737255
ES.34250.19	chr8	-	2788	4	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.515915691168	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	4040	False	NA	36	True	ATTAAA	-15	NA	124747801	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730403_124736462_124736573_124747599
ES.34250.2	chr8	-	3061	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	-140	-9	-140	9	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTTATTTATAC	3954	False	NA	45	True	ATTAAA	-24	NA	124747887	124723047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
ES.34250.20	chr8	-	2479	3	NNC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	280	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	3738	False	NA	36	True	ATTAAA	-15	NA	124748103	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730226_124747923
ES.34250.21	chr8	-	4361	4	NIC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	5	0	intron_retention	FALSE	canonical	3	200	junction_3	188.976188976283	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	3710	False	NA	36	True	ATTAAA	-15	NA	124748131	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124724846_124729715_124730441_124734929_124736573_124747927
ES.34250.22	chr8	-	2996	6	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	259.561476340385	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	4087	False	NA	36	True	ATTAAA	-15	NA	124747754	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124731996_124732074_124734929_124735035_124736427_124736573_124747599
ES.34250.23	chr8	-	3013	5	NNC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	259.137029387928	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	3731	False	NA	36	True	ATTAAA	-15	NA	124748110	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124735035_124736361_124736573_124747927
ES.34250.24	chr8	-	2681	6	NNC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	252.431376813581	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	3675	False	NA	36	True	ATTAAA	-15	NA	124748166	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124729881_124730202_124730441_124734929_124735035_124736427_124736573_124747927
ES.34250.25	chr8	-	2046	6	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-84	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	237.48818918001	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	4010	False	NA	36	True	ATTAAA	-15	NA	124747831	124723056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124723211_124724160_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
ES.34250.26	chr8	-	2988	5	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	259.616544156955	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAAATGTGTGGCAT	4028	False	NA	34	True	ATTAAA	-13	NA	124747813	124723058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736585_124747599
ES.34250.28	chr8	-	2503	4	ISM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	3	5337	3	1611	5prime_fragment	FALSE	canonical	3	200	junction_3	196.124676899387	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAAGTGTCCATCGG	3708	False	NA	NA	False	NA	NA	NA	124748133	124728393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_124730441_124734929_124735035_124736427_124736573_124747927
ES.34250.29	chr8	-	2677	2	ISM	ENSMUSG00000038697.16	ENSMUST00000212010.2	661	3	-149	4120	-81	1854	5prime_fragment	FALSE	canonical	3	323	junction_1	0	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAAGAA	4013	False	NA	NA	False	NA	NA	NA	124747828	124734124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_124736573_124747599
ES.34250.30	chr8	-	158	1	Intergenic	novelGene_27892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	124739620	124739462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124739500_124739600
ES.34250.4	chr8	-	3153	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	-172	-8	-172	8	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	3533	False	NA	44	True	ATTAAA	-23	NA	124748308	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
ES.34250.5	chr8	-	9405	3	NIC	ENSMUSG00000038697.16	novel	2973	5	NA	NA	-161	8	intron_retention	FALSE	canonical	3	200	junction_2	216	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	3544	False	NA	44	True	ATTAAA	-23	NA	124748297	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124730441_124734929_124736573_124747927
ES.34250.6	chr8	-	2886	4	NIC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-71	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	229.515915691168	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4023	False	NA	44	True	ATTAAA	-23	NA	124747818	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124724846_124729715_124730441_124736427_124736573_124747599
ES.34250.7	chr8	-	7847	4	NIC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	-57	8	intron_retention	FALSE	canonical	3	323	junction_3	138.348191973087	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	4037	False	NA	44	True	ATTAAA	-23	NA	124747804	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_124730441_124734929_124735035_124736427_124736573_124747599
ES.34250.8	chr8	-	4239	4	NNC	ENSMUSG00000038697.16	novel	2912	5	NA	NA	6393	8	intron_retention	FALSE	canonical	0	0	junction_3	282.490511148408	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCATCTTATTTATA	NA	False	NA	44	True	ATTAAA	-23	NA	124741286	124723048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_124724846_124729715_124730441_124734929_124736573_124741212
ES.34251.1	chr8	-	2547	1	Antisense	novelGene_ENSMUSG00000031976.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCAGAGCCAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	124762838	124760291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_124760300_124762800
ES.34251.2	chr8	-	8489	6	Genic_Genomic	ENSMUSG00000110704.2	novel	586	2	NA	NA	-4996	-8498	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	124780147	124760308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_124761915_124763373_124763485_124764898_124765141_124767902_124767991_124771815_124771956_124773845
ES.34251.3	chr8	-	4769	1	Intergenic	novelGene_27893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAATGTGTCTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	124780147	124775378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124775400_124780100
ES.34252.1	chr8	-	211	1	Intergenic	novelGene_27894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGACTGAGCATGCACCC	NA	False	NA	0	True	AATAAA	-8	NA	124791476	124791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124791300_124791500
ES.34253.1	chr8	-	227	1	Intergenic	novelGene_27895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGAAACAGGGTCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	124801411	124801184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124801200_124801400
ES.34254.1	chr8	+	158	1	Intergenic	novelGene_27896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAAATAGAGA	NA	False	NA	NA	False	NA	NA	NA	124820932	124821090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124820900_124821100
ES.34255.1	chr8	+	4745	1	Intergenic	novelGene_27897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	124847254	124851999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124847300_124852000
ES.34255.2	chr8	+	3901	2	Intergenic	novelGene_27898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	124848046	124851995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124848099_124848146
ES.34256.1	chr8	+	4199	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-81	-5	-81	3	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCTGTCAGTCTTGGTC	8484	False	NA	37	True	AATAAA	-27	NA	124958048	125072466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.11	chr8	+	6438	16	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	18	-2	intron_retention	FALSE	canonical	0	0	junction_1	67.2635281725708	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCGCCGCTGTCAGT	8583	False	NA	30	True	AATAAA	-20	NA	124958147	125072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958389_125002795_125002969_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.12	chr8	+	3024	18	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	19	-1382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.5661446319241	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTATTGCTTTGGGTTTTC	8584	False	NA	1	True	ACTAAA	-19	NA	124958148	125071079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958389_125002795_125002969_125003596_125003736_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.14	chr8	+	3973	15	NIC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	49	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	50.8521767238239	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCGCCGCTGTCAG	8614	False	NA	29	True	AATAAA	-19	NA	124958178	125072458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.15	chr8	+	4515	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	53	-455	53	453	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGACCATGATATGACA	8618	False	NA	NA	False	AATAAA	-20	NA	124958182	125072916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.16	chr8	+	3884	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	100	129	-17	-129	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTGATTTTTAAAA	8665	False	NA	-97	True	AATATA	-15	NA	124958229	125072332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.18	chr8	+	3805	17	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	117	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	49.5309246834743	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCCTCCGCCGCTGTCA	8799	False	NA	28	True	AATAAA	-18	NA	124958363	125072457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041_125070504_125070573
ES.34256.19	chr8	+	9678	1	Intergenic	novelGene_27900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAACTCTCTCACTAACC	NA	False	NA	NA	False	NA	NA	NA	124966560	124976238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_124966600_124976200
ES.34256.2	chr8	+	2794	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-59	1378	-59	-1378	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTTTGGGTTTTCTTTT	8506	False	NA	5	True	ACTAAA	-23	NA	124958070	125071083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.20	chr8	+	4008	16	NNC	ENSMUSG00000089704.10	novel	511	2	NA	NA	-14304	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8254529410872	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCTGTCAGTCTTGGTC	NA	False	NA	37	True	AATAAA	-27	NA	125007537	125072466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125007687_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.21	chr8	+	3509	12	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	92597	2	28622	-2	3prime_fragment	FALSE	canonical	3	176	junction_5	14.355003159264	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCGCCGCTGTCAGT	NA	False	NA	30	True	AATAAA	-20	NA	125050726	125072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.22	chr8	+	2970	6	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	102883	2	38908	-2	3prime_fragment	FALSE	canonical	3	184	junction_1	8.27042925125413	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCGCCGCTGTCAGT	6866	False	NA	30	True	AATAAA	-20	NA	125061012	125072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.3	chr8	+	2372	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-52	1793	-52	-1793	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATGATTTC	8513	False	NA	NA	False	NA	NA	NA	124958077	125070668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.4	chr8	+	2524	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	-32	1621	-32	-1621	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACGCTTCCCCGACATCA	8533	False	NA	NA	False	GATAAA	-19	NA	124958097	125070840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.5	chr8	+	4010	17	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.5309246834743	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCGCCGCTGTCAG	8562	False	NA	29	True	AATAAA	-19	NA	124958126	125072458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958171_124958273_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.7	chr8	+	3774	13	NIC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	72.9084281060077	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTCCGCCGCTGTCAGT	8566	False	NA	30	True	AATAAA	-20	NA	124958130	125072459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_124958389_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34256.8	chr8	+	3073	5	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	86.9899419473309	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCGCCGCTGTCAG	8567	False	NA	29	True	AATAAA	-19	NA	124958131	125072458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958389_125022096_125022191_125032253_125032435_125067553_125067678_125070041
ES.34256.9	chr8	+	4281	17	NNC	ENSMUSG00000089704.10	novel	4113	16	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.217424818832	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTCCGCCGCTGTCAG	8567	False	NA	29	True	AATAAA	-19	NA	124958131	125072458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_124958389_125002795_125002969_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ES.34257.1	chr8	-	172	1	Intergenic	novelGene_27899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACAGTGGCC	NA	False	NA	NA	False	NA	NA	NA	124963458	124963286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_124963300_124963500
ES.34258.1	chr8	+	4690	4	Intergenic	novelGene_27901	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTTTGTTTCTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	125090297	125095377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125090530_125090666_125093091_125093126_125093270_125093486
ES.34258.2	chr8	+	4706	3	Intergenic	novelGene_27902	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTCTTTGTTTCTGTAA	NA	False	NA	NA	False	AATAAA	-14	NA	125090318	125095378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125090530_125090666_125093270_125093486
ES.34259.1	chr8	+	299	1	Intergenic	novelGene_27904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTACACTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	125155549	125155848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125155500_125155800
ES.3426.1	chr10	+	155	1	Intergenic	novelGene_2643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6888	False	NA	NA	False	NA	NA	NA	82185223	82185378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82185200_82185400
ES.34260.1	chr8	-	3881	7	FSM	ENSMUSG00000050751.15	ENSMUST00000140012.8	3222	7	-152	-507	-152	503	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACGTAAAGGAAGAAACATA	NA	False	NA	NA	False	ATTAAA	-17	NA	125161229	125095284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
ES.34260.10	chr8	-	3957	4	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-1010	1	intron_retention	FALSE	canonical	2	5	junction_3	45.2425561710309	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCTGTTAGTATGTGATT	NA	False	NA	-5	True	AATAAA	-22	NA	125103295	125095790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125103030_125103124
ES.34260.12	chr8	-	3904	6	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-182	-2	intron_retention	FALSE	canonical	1	2	junction_5	37.2021504754766	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGGCTGTTAGTATGTG	NA	False	NA	-8	True	AATAAA	-19	NA	125161259	125095793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125161200
ES.34260.13	chr8	-	2957	8	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	18831	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.7231237870366	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCGGCTGTTAGTATG	NA	False	NA	-10	True	AATAAA	-17	NA	125141844	125095795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125134865_125135100_125141799
ES.34260.14	chr8	-	2260	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-1016	-36	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	40.5732362524855	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAAAAATAAAAAAT	NA	False	NA	-42	True	AATGAA	-27	NA	125103301	125095827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103124
ES.34260.15	chr8	-	3488	1	NIC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	2535	-36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAAAAATAAAAAAT	NA	False	NA	-42	True	AATGAA	-27	NA	125099315	125095827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125095800_125099300
ES.34260.16	chr8	-	4190	1	Intergenic	novelGene_27903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCCAGCTGCTCTTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	125150260	125146070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125146100_125150300
ES.34260.2	chr8	-	3852	4	NIC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-4698	2	intron_retention	FALSE	canonical	3	84	junction_3	8.98146239020499	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTATGTGATTTTGTT	NA	False	NA	0	True	AATAAA	-27	NA	125106983	125095785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125097426_125098590_125098697_125100984_125103030_125106922
ES.34260.3	chr8	-	3408	7	FSM	ENSMUSG00000050751.15	ENSMUST00000140012.8	3222	7	-182	-4	-182	0	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125161259	125095787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
ES.34260.6	chr8	-	2807	8	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	18713	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	41.4132976770722	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125141962	125095788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125141799_125141879_125141919
ES.34260.7	chr8	-	2832	7	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-10470	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	35.5011736895181	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125130425	125095788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125130278
ES.34260.8	chr8	-	4604	5	ISM	ENSMUSG00000050751.15	ENSMUST00000136892.3	1739	7	10551	-973	-7119	-1	3prime_fragment	FALSE	canonical	3	84	junction_4	7.82623792124926	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTAGTATGTGATTTT	NA	False	NA	-3	True	AATAAA	-24	NA	125109404	125095788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922
ES.34260.9	chr8	-	2160	5	NNC	ENSMUSG00000050751.15	novel	2824	7	NA	NA	-1038	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	42.292877650971	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGCTGTTAGTATGTGATT	NA	False	NA	-5	True	AATAAA	-22	NA	125103323	125095790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125103283
ES.34261.1	chr8	-	2457	1	Intergenic	novelGene_27905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGTGCATCTCAG	NA	False	NA	NA	False	NA	NA	NA	125180048	125177591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125177600_125180000
ES.34262.1	chr8	-	171	1	Intergenic	novelGene_27906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	125186020	125185849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125185800_125186000
ES.34263.1	chr8	+	2810	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	15	0	15	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247520	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.10	chr8	+	2453	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	42	330	4	-330	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATTTTTATTGTAA	NA	False	NA	NA	False	NA	NA	NA	125247547	125278417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.11	chr8	+	6615	15	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	5	-3	intron_retention	FALSE	canonical	3	176	junction_6	27.3056210106181	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247548	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.13	chr8	+	4591	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	176	junction_6	26.2523064462915	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247549	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.14	chr8	+	5250	17	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	6	-5	intron_retention	FALSE	canonical	1	1	junction_13	60.7114074948028	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTGTGAGTTATGTA	NA	False	NA	24	True	AATAAA	-14	NA	125247549	125278742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273242_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.15	chr8	+	2796	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.1598620126552	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247549	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255696_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.16	chr8	+	10862	13	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	6	-5	intron_retention	FALSE	canonical	1	1	junction_9	69.6405453421752	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTGTGAGTTATGTA	NA	False	NA	24	True	AATAAA	-14	NA	125247549	125278742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125255796_125256636_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125272042_125272758_125272832_125273242_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.17	chr8	+	2816	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	58.901654003013	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGAGTTATGTAT	NA	False	NA	25	True	AATAAA	-15	NA	125247557	125278743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273242_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.18	chr8	+	2763	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.6608492853346	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247557	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255722_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276904_125277090_125278129
ES.34263.19	chr8	+	7851	15	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_4	25.3213026392194	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247557	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.2	chr8	+	7852	15	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_8	64.7212232169161	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247522	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270782_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.20	chr8	+	8526	14	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	176	junction_3	26.2162152270003	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247558	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.22	chr8	+	2750	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.0980591626248	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAAATGTGTGAGTTAT	NA	False	NA	21	True	AATAAA	-11	NA	125247560	125278739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256736_125259167_125259277_125259959_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.23	chr8	+	8427	14	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	5	0	intron_retention	FALSE	canonical	3	176	junction_6	25.0856520909544	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247562	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125275396_125276905_125277090_125278129
ES.34263.24	chr8	+	2728	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	59.2818614784153	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247568	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270782_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.26	chr8	+	9563	13	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	20	-3	intron_retention	FALSE	canonical	3	176	junction_3	26.5250143994096	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247577	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.27	chr8	+	3458	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	28	-4	intron_retention	FALSE	canonical	3	176	junction_7	27.1113877134683	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGAGTTATGTAT	NA	False	NA	25	True	AATAAA	-15	NA	125247585	125278743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.28	chr8	+	6584	15	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	35	-3	intron_retention	FALSE	canonical	3	176	junction_7	25.2773392102693	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247592	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125275396_125276905_125277090_125278129
ES.34263.29	chr8	+	2816	18	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	76.3452819506521	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247593	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262102_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273242_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.3	chr8	+	4832	16	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	176	junction_7	27.5764795110294	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247524	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.30	chr8	+	8045	15	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	37	0	intron_retention	FALSE	canonical	3	176	junction_6	25.3058838040097	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247594	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125270901_125271867_125272042_125272758_125272832_125273289_125275396_125276905_125277090_125278129
ES.34263.31	chr8	+	4257	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	94	-1526	42	1526	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTCTTGGTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125247599	125280273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.32	chr8	+	2774	18	NNC	ENSMUSG00000031979.18	novel	2087	4	NA	NA	3375	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.2860638788089	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125250932	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125251067_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.33	chr8	+	2734	18	NNC	ENSMUSG00000031979.18	novel	2087	4	NA	NA	4144	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.2860638788089	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125251701	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125251799_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.34	chr8	+	5579	11	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	-4109	-3	intron_retention	FALSE	canonical	3	176	junction_2	27.5963765737461	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125257838	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.35	chr8	+	3790	9	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	1656	0	intron_retention	FALSE	canonical	3	213	junction_3	22.5055548698538	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125263603	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125264649_125267711_125267852_125269627_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.36	chr8	+	3286	5	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	8424	0	intron_retention	FALSE	canonical	3	215	junction_1	21.9601912559977	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125270371	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125272042_125272758_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.37	chr8	+	1145	1	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	9957	536	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAATAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	125271904	125273049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125271900_125273000
ES.34263.38	chr8	+	5457	2	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	10300	-3	intron_retention	FALSE	canonical	3	236	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125272247	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125277090_125278129
ES.34263.39	chr8	+	175	2	Intergenic	novelGene_27907	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	125272878	125322507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125272890_125322343
ES.34263.4	chr8	+	3865	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	-18	0	intron_retention	FALSE	canonical	3	176	junction_7	26.9170455984679	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247524	125278747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.40	chr8	+	3034	3	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	11211	-5	intron_retention	FALSE	canonical	3	236	junction_2	8	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGTGTGAGTTATGTA	NA	False	NA	24	True	AATAAA	-14	NA	125273158	125278742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125275396_125276905_125277090_125278129
ES.34263.41	chr8	+	215	1	Intergenic	novelGene_27908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	125322333	125322548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125322300_125322500
ES.34263.5	chr8	+	4801	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	186	junction_4	24.1104230572589	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAATGTGTGAGTTATGT	NA	False	NA	23	True	AATAAA	-13	NA	125247528	125278741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.6	chr8	+	5791	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	37	-3003	0	3003	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	125247542	125281750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.7	chr8	+	4857	16	NNC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	-3	intron_retention	FALSE	canonical	1	1	junction_12	62.7008417451916	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247543	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125272042_125272758_125272832_125273242_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.8	chr8	+	6269	16	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	1	-3	intron_retention	FALSE	canonical	3	176	junction_6	27.6091772182125	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGAGTTATGTATC	NA	False	NA	26	True	AATAAA	-16	NA	125247544	125278744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ES.34263.9	chr8	+	2023	13	FSM	ENSMUSG00000031979.18	ENSMUST00000108803.8	2101	13	2	76	2	-76	multi-exon	FALSE	canonical	3	176	junction_7	25.5575331360443	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTTGCTTTTCAC	NA	False	NA	NA	False	CATAAA	-13	NA	125247545	125272437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867
ES.34264.1	chr8	-	3530	4	Antisense	novelGene_ENSMUSG00000031981.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	125309412	125305168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_125307841_125308435_125308907_125308951_125309269_125309342
ES.34265.1	chr8	-	188	1	Intergenic	novelGene_27909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAACAACTGT	NA	False	NA	NA	False	NA	NA	NA	125322743	125322555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125322600_125322700
ES.34266.1	chr8	-	177	1	Intergenic	novelGene_27910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAAACACAC	NA	False	NA	NA	False	NA	NA	NA	125346460	125346283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125346300_125346500
ES.34267.1	chr8	-	176	1	Intergenic	novelGene_27911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCATT	NA	False	NA	NA	False	NA	NA	NA	125347403	125347227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125347200_125347400
ES.34268.1	chr8	+	173	1	Intergenic	novelGene_27912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCGT	NA	False	NA	NA	False	NA	NA	NA	125385705	125385878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125385700_125385900
ES.34269.1	chr8	-	3390	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	-82	-1	-82	1	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTGTTTCATTTTCT	NA	False	NA	-2	True	AATAAA	-20	NA	125390190	125362493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ES.34269.2	chr8	-	3110	4	NNC	ENSMUSG00000031983.8	novel	3307	4	NA	NA	157	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	120.704413985386	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGATCTGTTTCATTTT	NA	False	NA	-4	True	AATAAA	-18	NA	125389951	125362495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125364704_125365829_125366316_125378109_125378161_125389586
ES.34269.3	chr8	-	3107	3	NIC	ENSMUSG00000031983.8	novel	3307	4	NA	NA	144	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	130	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCAGATCTGTTTCA	NA	False	NA	-8	True	AATAAA	-14	NA	125389964	125362499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125364704_125365829_125366355_125389586
ES.34269.5	chr8	-	1274	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	155	1878	155	-1878	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACCTTCCCTCCAATG	NA	False	NA	NA	False	AATAAA	-19	NA	125389953	125364372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ES.34269.6	chr8	-	1256	4	NNC	ENSMUSG00000031983.8	novel	3307	4	NA	NA	160	-1885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	122.11833969101	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCATCCCACCTTCCC	NA	False	NA	NA	False	AATAAA	-12	NA	125389948	125364379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125364704_125365829_125366349_125378109_125378161_125389586
ES.3427.1	chr10	+	3517	4	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	-14	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.5819680936873	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTATGTTGTCATCCAT	NA	False	NA	9	True	AATAAA	-21	NA	82190074	82215476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190322_82204404_82204532_82204731_82204793_82212394
ES.3427.10	chr10	+	2422	5	FSM	ENSMUSG00000073427.5	ENSMUST00000211099.2	490	5	15	-1947	11	1947	multi-exon	FALSE	canonical	3	10	junction_3	62.9816441512922	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGACAAGTATCCCA	NA	False	NA	NA	False	NA	NA	NA	82190103	82238627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587
ES.3427.12	chr10	+	3508	5	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.1725751310598	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTTATGTTGTCAT	NA	False	NA	5	True	AATAAA	-17	NA	82190103	82215472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190216_82204404_82204532_82204731_82204793_82211812_82211943_82212394
ES.3427.13	chr10	+	3516	5	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.4555409139976	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGTTTATGTTGTCAT	NA	False	NA	5	True	AATAAA	-17	NA	82190106	82215472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190216_82190352_82190494_82204404_82204532_82204731_82204793_82212394
ES.3427.14	chr10	+	4959	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-42	-1587	15	-14	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82190107	82217057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
ES.3427.15	chr10	+	3652	4	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.0433880705538	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTATGTTGTCATCC	NA	False	NA	7	True	AATAAA	-19	NA	82190109	82215474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190494_82204404_82204532_82204731_82204793_82212394
ES.3427.16	chr10	+	3166	2	NIC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGATGTTTATGTTG	NA	False	NA	1	True	AATAAA	-13	NA	82190123	82215468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82190216_82212394
ES.3427.2	chr10	+	3404	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	-67	-7	-6	7	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATGTTGTCATCCATT	NA	False	NA	10	True	AATAAA	-22	NA	82190082	82215477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
ES.3427.3	chr10	+	1556	7	NIC	ENSMUSG00000073427.5	novel	947	8	NA	NA	-4	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	61.8115415328454	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCTATTGCATGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	82190084	82258702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587_82236821_82245267_82245321_82257833
ES.3427.4	chr10	+	1634	7	NNC	ENSMUSG00000073427.5	novel	1531	7	NA	NA	-2	5100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.9419531138271	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGACAGCATGAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	82190086	82241780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587_82236821_82239804_82239864_82240837
ES.3427.5	chr10	+	3056	4	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.8194072447099	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTATGTTGTCATCCA	NA	False	NA	8	True	AATAAA	-20	NA	82190095	82215475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190216_82204404_82204532_82204731_82204793_82212727
ES.3427.6	chr10	+	3419	5	NNC	ENSMUSG00000073427.5	novel	3330	4	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.419204175436	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATGTTTATGTTGTCA	NA	False	NA	4	True	AATAAA	-16	NA	82190097	82215471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82190216_82204404_82204532_82204731_82204793_82205566_82205603_82212394
ES.3427.7	chr10	+	9931	1	NIC	ENSMUSG00000073427.5	novel	490	5	NA	NA	7	-15440	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	82190099	82200030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82190100_82200000
ES.3427.8	chr10	+	2341	4	NIC	ENSMUSG00000073427.5	novel	1531	7	NA	NA	8	1945	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	64.8194072447099	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAATGACAAGTATCC	NA	False	NA	NA	False	NA	NA	NA	82190100	82238625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82190216_82204404_82204532_82204731_82204793_82236587
ES.3427.9	chr10	+	752	5	FSM	ENSMUSG00000073427.5	ENSMUST00000211099.2	490	5	14	-276	10	276	multi-exon	FALSE	canonical	3	10	junction_3	62.9816441512922	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTTATGATGCCTGA	NA	False	NA	NA	False	TATAAA	-18	NA	82190102	82236956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587
ES.34270.1	chr8	+	4512	2	Antisense	novelGene_ENSMUSG00000037300.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAATCAAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	125420811	125426018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_125421679_125422373
ES.34271.1	chr8	+	3063	5	NNC	ENSMUSG00000031982.6	novel	937	3	NA	NA	-801	-10	intron_retention	FALSE	canonical	0	0	junction_1	52.4517635547176	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTCAGTAACTAAGGTT	NA	False	NA	11	True	AATAAA	-20	NA	125448076	125460852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125448364_125451994_125452115_125455107_125455222_125457530_125457756_125458535
ES.34271.10	chr8	+	1132	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	32	1	12	-1	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAAGGTTGTCTTTTGA	NA	False	NA	20	True	AATAAA	-29	NA	125448909	125460861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
ES.34271.11	chr8	+	2903	5	ISM	ENSMUSG00000031982.6	ENSMUST00000212036.2	891	6	12	-159	12	-8	intron_retention	FALSE	canonical	3	24	junction_2	38.9767558937375	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGTAACTAAGGTTGT	NA	False	NA	13	True	AATAAA	-22	NA	125448909	125460854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125449082_125451994_125452115_125455107_125455222_125457577_125457756_125458535
ES.34271.12	chr8	+	2343	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	35	-16	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	47.0293525364745	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCCAGTTCAGTAACT	NA	False	NA	5	True	AATAAA	-14	NA	125448932	125460846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125449082_125451994_125452115_125455107_125455222_125457530_125457756_125458535_125458681_125459256
ES.34271.13	chr8	+	826	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	-3062	-10	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	47.0451910401053	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTCAGTAACTAAGGTT	NA	False	NA	11	True	AATAAA	-20	NA	125452079	125460852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125452115_125455107_125455222_125457530_125457756_125458535_125458681_125460545
ES.34271.14	chr8	+	4105	1	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	1609	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGTAACTAAGGTTGTC	NA	False	NA	14	True	AATAAA	-23	NA	125456750	125460855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125456800_125460900
ES.34271.2	chr8	+	3027	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	-3	6	-3	-6	intron_retention	FALSE	canonical	3	83	junction_2	14.0890028036054	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTAACTAAGGTTGTCT	NA	False	NA	15	True	AATAAA	-24	NA	125448874	125460856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
ES.34271.3	chr8	+	2976	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	-4	2	intron_retention	FALSE	canonical	3	24	junction_2	37.5724300518346	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTTGTCTTTTGAATT	NA	False	NA	23	True	AATAAA	-32	NA	125448893	125460864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125449082_125451994_125452115_125455107_125455222_125457530_125457756_125458535
ES.34271.4	chr8	+	1087	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	22	1921	2	-226	5prime_fragment	FALSE	canonical	3	83	junction_2	14.0890028036054	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGTGGCCTCGTCATT	NA	False	NA	NA	False	NA	NA	NA	125448899	125458941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
ES.34271.5	chr8	+	1154	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	37.0113496106262	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGTTCAGTAACTAAGG	NA	False	NA	9	True	AATAAA	-18	NA	125448899	125460850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460522
ES.34271.6	chr8	+	2411	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	9	-14	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	40.7950977447046	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCCAGTTCAGTAACTAA	NA	False	NA	7	True	AATAAA	-16	NA	125448906	125460848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125459256
ES.34271.7	chr8	+	3039	6	NNC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	9	-13	intron_retention	FALSE	canonical	0	0	junction_3	53.416851273732	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAGTTCAGTAACTAAG	NA	False	NA	8	True	AATAAA	-17	NA	125448906	125460849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125449082_125451994_125452115_125453503_125453555_125455067_125455222_125457530_125457756_125458535
ES.34271.8	chr8	+	1302	5	ISM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	32	1696	12	-1	5prime_fragment	FALSE	canonical	3	83	junction_2	14.0890028036054	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATGGCTGCTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	125448909	125459166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535
ES.34271.9	chr8	+	2943	5	NIC	ENSMUSG00000031982.6	novel	1165	6	NA	NA	12	-8	intron_retention	FALSE	canonical	3	31	junction_3	30.6634962129239	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGTAACTAAGGTTGT	NA	False	NA	13	True	AATAAA	-22	NA	125448909	125460854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125449082_125451994_125452115_125455067_125455222_125457577_125457756_125458535
ES.34272.1	chr8	-	2970	19	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-39	8	combination_of_known_junctions	FALSE	canonical	3	125	junction_15	88.9418592170619	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTCGTTTTGCTATC	NA	False	NA	0	True	ATTAAA	-24	NA	125448761	125398062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.11	chr8	-	3085	21	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	124.515169758548	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448721	125398066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.12	chr8	-	4322	22	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	4	intron_retention	FALSE	canonical	3	107	junction_6	117.098849650922	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448710	125398066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.13	chr8	-	2987	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.977608450803	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448722	125398066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398642_125398724_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.15	chr8	-	3329	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	133.210801996666	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTTTGGTCGTTTTGC	NA	False	NA	-4	True	ATTAAA	-20	NA	125448722	125398066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411392_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.16	chr8	-	3180	20	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	84	3	intron_retention	FALSE	canonical	3	213	junction_16	75.5660815907548	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448619	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.17	chr8	-	5340	15	NNC	ENSMUSG00000037300.20	novel	2905	19	NA	NA	-10677	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	129.829814034546	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125419946	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400533_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015
ES.34272.18	chr8	-	5648	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	3	intron_retention	FALSE	canonical	2	6	junction_15	138.803543015728	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448711	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125421568_125421680_125422374_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.19	chr8	-	3389	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	127.153328734503	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448720	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403001_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.2	chr8	-	3190	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	-31	-11	-31	8	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTCGTTTTGCTATC	NA	False	NA	0	True	ATTAAA	-24	NA	125448753	125398062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.21	chr8	-	5447	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	135.826092854061	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448721	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400533_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.22	chr8	-	3222	22	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	129.816685684415	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448710	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.23	chr8	-	5294	22	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_11	139.621126470589	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCAGTTTGGTCGTTTTG	NA	False	NA	-5	True	ATTAAA	-19	NA	125448704	125398067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125410055_125410495_125410627_125411216_125412371_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424753_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.25	chr8	-	3205	22	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	113.470065578164	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCAGTTTGGTCGTTTT	NA	False	NA	-6	True	ATTAAA	-18	NA	125448708	125398068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.26	chr8	-	3216	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	111.441139172211	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCAGTTTGGTCGTTTT	NA	False	NA	-6	True	ATTAAA	-18	NA	125448707	125398068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403001_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.27	chr8	-	4184	20	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-9	1	intron_retention	FALSE	canonical	3	213	junction_16	76.3021766443449	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCAGTTTGGTCGTTT	NA	False	NA	-7	True	ATTAAA	-17	NA	125448731	125398069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.29	chr8	-	3929	22	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-3	1	intron_retention	FALSE	canonical	3	143	junction_16	105.683865206943	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCAGTTTGGTCGTTT	NA	False	NA	-7	True	ATTAAA	-17	NA	125448714	125398069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.30	chr8	-	3686	26	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	176.160381470977	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448698	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405824_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125419586_125419781_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436728_125437105_125437194_125439355_125439432_125440927_125441023_125448475
ES.34272.31	chr8	-	3270	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	143.2246112098	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448721	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403001_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411257_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.32	chr8	-	3060	20	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	113.489160159392	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448710	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.33	chr8	-	5389	21	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	110.081731000198	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448724	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.34	chr8	-	7916	15	NIC	ENSMUSG00000037300.20	novel	2905	19	NA	NA	171	0	intron_retention	FALSE	canonical	3	125	junction_11	95.9729979032155	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448532	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125401181_125401960_125405826_125406726_125406811_125408805_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.36	chr8	-	5548	22	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	146	junction_17	94.362018186294	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448719	125398070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.37	chr8	-	1908	11	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	119.740928675203	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGGTCAGTTTGGTCG	NA	False	NA	-10	True	ATTAAA	-14	NA	125448717	125398072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408859_125440927_125441023_125448475
ES.34272.38	chr8	-	4465	19	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	144.929868097182	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448719	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125404187_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415736_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.4	chr8	-	3291	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_17	118.44520475277	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448719	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424753_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.42	chr8	-	5442	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	157.874996319271	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448722	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411298_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125420643_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.43	chr8	-	3774	20	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_16	75.6955924389356	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448722	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.44	chr8	-	3468	25	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	162.219753001565	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448709	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125421568_125421680_125422374_125422492_125423471_125423541_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.46	chr8	-	10111	14	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_7	164.350289782158	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448721	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125401181_125401960_125402097_125403079_125410055_125410495_125410627_125411216_125411298_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448303
ES.34272.47	chr8	-	2939	19	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.116196553526	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448719	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398959_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.49	chr8	-	3203	22	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	131.824679145242	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448672	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.5	chr8	-	3198	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	133.656066883909	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448725	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411257_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.51	chr8	-	3290	23	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	127.307048943661	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448721	125398073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405810_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.53	chr8	-	6833	13	NNC	ENSMUSG00000037300.20	novel	3038	18	NA	NA	-10293	-1	intron_retention	FALSE	canonical	0	0	junction_12	123.438468702247	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCGTGGTCAGTTTGGT	NA	False	NA	-12	True	ATTAAA	-12	NA	125419562	125398074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417832_125417897
ES.34272.54	chr8	-	3633	24	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.710462013563	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACCGTGGTCAGTTTGG	NA	False	NA	-13	True	ATTAAA	-11	NA	125448721	125398075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406113_125406446_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.56	chr8	-	1855	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	1	8512	-1	-306	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACCACAGGCAGACCAA	NA	False	NA	NA	False	NA	NA	NA	125448721	125406585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.57	chr8	-	2014	16	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-4	8514	-1	-306	5prime_fragment	FALSE	canonical	3	143	junction_10	122.703146749471	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACCACAGGCAGACCAA	NA	False	NA	NA	False	NA	NA	NA	125448721	125406585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.58	chr8	-	1616	12	ISM	ENSMUSG00000037300.20	ENSMUST00000041614.15	3038	18	1	8512	1	-306	5prime_fragment	FALSE	canonical	3	125	junction_8	104.246529165125	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACCACAGGCAGACCAA	NA	False	NA	NA	False	NA	NA	NA	125448710	125406585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.59	chr8	-	1487	12	ISM	ENSMUSG00000037300.20	ENSMUST00000041614.15	3038	18	-10	8652	-1	-446	5prime_fragment	FALSE	canonical	3	125	junction_8	104.246529165125	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTCCAGTTCTCCTCT	NA	False	NA	-1	True	ATTAAA	-25	NA	125448721	125406725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.6	chr8	-	2862	18	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.607285752666	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448721	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125401086_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.60	chr8	-	1724	14	ISM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	-9	8653	-9	-447	5prime_fragment	FALSE	canonical	3	213	junction_10	81.4508963775725	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTCCAGTTCTCCTC	NA	False	NA	-2	True	ATTAAA	-24	NA	125448731	125406726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.61	chr8	-	3692	13	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	-447	intron_retention	FALSE	canonical	3	213	junction_9	84.529416313034	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTCCAGTTCTCCTC	NA	False	NA	-2	True	ATTAAA	-24	NA	125448704	125406726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.62	chr8	-	2733	13	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	-451	intron_retention	FALSE	canonical	3	213	junction_9	84.7068064299177	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125448721	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125406811_125408805_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.63	chr8	-	4500	10	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-1	-451	intron_retention	FALSE	canonical	3	125	junction_6	114.942927330088	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125448721	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.64	chr8	-	1879	16	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	-14	8659	-9	-451	5prime_fragment	FALSE	canonical	3	143	junction_10	122.703146749471	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125448731	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.65	chr8	-	4732	12	NIC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	-3	-451	intron_retention	FALSE	canonical	3	213	junction_8	88.2355974715252	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125448725	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.66	chr8	-	1070	9	NNC	ENSMUSG00000037300.20	novel	3038	18	NA	NA	-10139	-451	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	146.628569862766	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125419408	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332
ES.34272.67	chr8	-	3862	15	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	1	-451	intron_retention	FALSE	canonical	3	143	junction_9	125.910804191876	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGTAAGCCTCCAGTTCT	NA	False	NA	-6	True	ATTAAA	-20	NA	125448719	125406730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.68	chr8	-	4794	14	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	0	-454	intron_retention	FALSE	canonical	0	0	junction_3	158.295992690198	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGGGTAAGCCTCCAGT	NA	False	NA	-9	True	ATTAAA	-17	NA	125448707	125406733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125410055_125410495_125410627_125411216_125411298_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.69	chr8	-	5211	10	ISM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	22234	8662	10204	-454	intron_retention	FALSE	canonical	3	284	junction_4	62.858060759692	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGGGTAAGCCTCCAGT	NA	False	NA	-9	True	ATTAAA	-17	NA	125426483	125406733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374
ES.34272.7	chr8	-	3317	23	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-2	5	combination_of_known_junctions	FALSE	canonical	3	143	junction_17	103.32721034023	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448724	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.70	chr8	-	2487	11	NIC	ENSMUSG00000037300.20	novel	3038	18	NA	NA	1	-454	intron_retention	FALSE	canonical	3	125	junction_7	109.279687042012	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACGGGTAAGCCTCCAGT	NA	False	NA	-9	True	ATTAAA	-17	NA	125448706	125406733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125406811_125408805_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.71	chr8	-	4883	14	NIC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	-1	-455	intron_retention	FALSE	canonical	3	143	junction_8	130.347464641479	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACGGGTAAGCCTCCAG	NA	False	NA	-10	True	ATTAAA	-16	NA	125448721	125406734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.72	chr8	-	1808	16	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	2	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	143.667672076915	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACGGGTAAGCCTCCAG	NA	False	NA	-10	True	ATTAAA	-16	NA	125448715	125406734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426445_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.73	chr8	-	4084	2	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	1525	3741	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAGAAGTTGCAACAC	NA	False	NA	NA	False	AATAAA	-11	NA	125435162	125430978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125433559_125433658
ES.34272.74	chr8	-	4146	2	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	143	2418	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCTTACTATGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	125436544	125432301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125433559_125433655
ES.34272.75	chr8	-	6224	4	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	-1	2418	intron_retention	TRUE	non_canonical	0	0	junction_1	227.033526647987	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTCTTACTATGTGGCCT	NA	False	NA	NA	False	NA	NA	NA	125448721	125432301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125433529_125433628_125436713_125439355_125441023_125448475
ES.34272.76	chr8	-	1687	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCATTTAATTCCTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	125448721	125434712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.77	chr8	-	1672	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	227.579107125413	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTCATTTAATTCCTA	NA	False	NA	NA	False	AATAAA	-20	NA	125448718	125434714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125435912_125436641_125436713_125439355_125439430_125440935_125441023_125448475
ES.34272.8	chr8	-	3395	24	NNC	ENSMUSG00000037300.20	novel	3301	23	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	141.376663769524	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448697	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34272.9	chr8	-	2992	20	FSM	ENSMUSG00000037300.20	ENSMUST00000117624.9	2970	20	-17	-5	0	5	multi-exon	FALSE	canonical	1	2	junction_15	118.173026812077	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTTGGTCGTTTTGCT	NA	False	NA	-3	True	ATTAAA	-21	NA	125448720	125398065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ES.34273.1	chr8	-	6225	1	Antisense	novelGene_ENSMUSG00000031982.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAGAAACCATCAGCT	NA	False	NA	NA	False	NA	NA	NA	125458882	125452657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_125452700_125458900
ES.34274.1	chr8	-	1387	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	-50	1	-50	-1	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTGTGGTTAAACATG	NA	False	NA	NA	False	ATTAAA	-19	NA	125478621	125466996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125468041_125478278
ES.34275.1	chr8	+	6640	6	NNC	ENSMUSG00000090118.2	novel	1119	2	NA	NA	-9235	-28991	intron_retention	FALSE	canonical	0	0	junction_1	0.894427190999916	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGGGTGTGCTCTGTGGT	NA	False	NA	NA	False	AATAAA	-27	NA	125549201	125561451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125549397_125549860_125550007_125551456_125551596_125552673_125552978_125554837_125555001_125555758
ES.34275.2	chr8	+	6375	6	NNC	ENSMUSG00000090118.2	novel	1119	2	NA	NA	-9233	-28993	intron_retention	FALSE	non_canonical	0	0	junction_1	0.8	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACGGGTGTGCTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	125549203	125561449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125549397_125549860_125550007_125551456_125551596_125552673_125552978_125554837_125555022_125556040
ES.34275.3	chr8	+	6530	6	NNC	ENSMUSG00000090118.2	novel	1119	2	NA	NA	-8742	-28990	intron_retention	FALSE	canonical	0	0	junction_1	0.894427190999916	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGGTGTGCTCTGTGGTC	NA	False	NA	NA	False	AATAAA	-28	NA	125549694	125561452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125549779_125549860_125550007_125551456_125551596_125552673_125552978_125554837_125555001_125555758
ES.34275.4	chr8	+	6438	5	ISM	ENSMUSG00000036913.16	ENSMUST00000041106.9	5694	11	30025	2	30025	-2	intron_retention	FALSE	canonical	0	0	junction_2	0.82915619758885	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACTGGAAGACGGGT	NA	False	NA	NA	False	AATAAA	-15	NA	125549855	125561439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125550007_125551456_125551596_125552673_125552978_125554837_125555001_125555758
ES.34276.1	chr8	-	172	1	Intergenic	novelGene_27913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTACAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	125550539	125550367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125550400_125550500
ES.34277.1	chr8	+	3109	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.957388085742	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5112	False	NA	33	True	AATAAA	-24	NA	125589763	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590174_125597518_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.10	chr8	+	3623	15	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-9	-142	intron_retention	FALSE	canonical	3	573	junction_6	37.2581315600627	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCTGACACACTT	5150	False	NA	NA	False	AATAAA	-24	NA	125589801	125616654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.11	chr8	+	2459	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	31	494	-8	15	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGGCCCCTCCCCGTT	5151	False	NA	26	True	AATAAA	-31	NA	125589802	125616302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.12	chr8	+	2880	15	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-8	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	163.667969015421	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5151	False	NA	26	True	AATAAA	-17	NA	125589802	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610353_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.13	chr8	+	3201	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	31	-248	-8	248	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCCTTTTATTTTTT	5151	False	NA	NA	False	NA	NA	NA	125589802	125617044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.14	chr8	+	3761	15	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_10	165.953890817754	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5151	False	NA	33	True	AATAAA	-24	NA	125589802	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611705_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.15	chr8	+	3834	14	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	573	junction_6	38.6152313818596	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCCAATGGTCTTATTA	5152	False	NA	32	True	AATAAA	-23	NA	125589803	125616794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125614559_125616010
ES.34277.16	chr8	+	2852	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_3	145.263653020599	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5152	False	NA	26	True	AATAAA	-17	NA	125589803	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125601049_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.17	chr8	+	5878	13	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	573	junction_6	32.8540543752044	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5152	False	NA	33	True	AATAAA	-24	NA	125589803	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.18	chr8	+	5775	13	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_10	222.761503631126	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5152	False	NA	33	True	AATAAA	-24	NA	125589803	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125601049_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125612675_125613432_125613519_125613591_125614559_125616010
ES.34277.2	chr8	+	3042	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	-7	-51	-7	51	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCCTGTGCGATGTGC	5113	False	NA	85	True	ACTAAA	-19	NA	125589764	125616847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.20	chr8	+	4156	15	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	573	junction_6	35.3186659326949	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5154	False	NA	26	True	AATAAA	-17	NA	125589805	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.22	chr8	+	2583	15	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-5	-154	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	218.251773726341	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	5154	False	NA	NA	False	AATAAA	-12	NA	125589805	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.23	chr8	+	2918	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-5	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.957388085742	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	5154	False	NA	NA	False	AATAAA	-12	NA	125589805	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590174_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.24	chr8	+	2939	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	161.776333937391	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5154	False	NA	33	True	AATAAA	-24	NA	125589805	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605394_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.25	chr8	+	3453	15	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-5	-142	intron_retention	FALSE	canonical	0	0	junction_9	167.213065230183	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCTGACACACTT	5154	False	NA	NA	False	AATAAA	-24	NA	125589805	125616654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610260_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.26	chr8	+	2977	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	161.936805232439	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5155	False	NA	26	True	AATAAA	-17	NA	125589806	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603622_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.27	chr8	+	2756	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-4	-154	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	161.470822957792	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	5155	False	NA	NA	False	AATAAA	-12	NA	125589806	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590013_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.3	chr8	+	2861	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	-7	130	-7	-130	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACTTCCATCATAACTA	5113	False	NA	-96	True	AATAAA	-36	NA	125589764	125616666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.31	chr8	+	2780	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	0	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	161.836872601189	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	5159	False	NA	NA	False	AATAAA	-12	NA	125589810	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613432_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.34	chr8	+	2823	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	1	-154	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	162.008586878049	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	5160	False	NA	NA	False	AATAAA	-12	NA	125589811	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125615977
ES.34277.35	chr8	+	3450	14	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	40	1757	1	-1248	intron_retention	FALSE	canonical	3	573	junction_6	38.1043413327454	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	5160	False	NA	NA	False	NA	NA	NA	125589811	125615039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591
ES.34277.36	chr8	+	6223	14	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	573	junction_4	37.8051685518101	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5160	False	NA	33	True	AATAAA	-24	NA	125589811	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.37	chr8	+	7684	13	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	1	-8	intron_retention	FALSE	canonical	3	573	junction_5	38.6662176698069	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5160	False	NA	26	True	AATAAA	-17	NA	125589811	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.4	chr8	+	2935	16	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	18	-1	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	158.602984419167	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5138	False	NA	33	True	AATAAA	-24	NA	125589789	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.40	chr8	+	2892	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	161.470822957792	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTTTATACCCAATGG	5163	False	NA	24	True	AATAAA	-15	NA	125589814	125616786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590013_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.41	chr8	+	4249	15	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	45	142	6	-142	intron_retention	FALSE	canonical	3	573	junction_6	36.72373419277	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCTGACACACTT	5165	False	NA	NA	False	AATAAA	-24	NA	125589816	125616654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496
ES.34277.42	chr8	+	3060	17	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	212.425538424644	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTTTATACCCAATGGT	5166	False	NA	25	True	AATAAA	-16	NA	125589817	125616787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125604804_125604936_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.43	chr8	+	5056	14	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	49	142	10	-142	intron_retention	FALSE	canonical	3	573	junction_6	38.1043413327454	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAAATCTGACACACTT	5169	False	NA	NA	False	AATAAA	-24	NA	125589820	125616654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591
ES.34277.44	chr8	+	4928	12	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	7722	-8	intron_retention	FALSE	canonical	3	573	junction_5	40.2878075603095	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	NA	False	NA	26	True	AATAAA	-17	NA	125597532	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125611784_125612533_125612675_125613421_125614559_125616010
ES.34277.45	chr8	+	2099	14	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	10210	512	10171	-3	3prime_fragment	FALSE	canonical	3	573	junction_4	35.6016753810945	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCTTGGGCAGCAGAG	NA	False	NA	8	True	AATAAA	-13	NA	125599981	125616284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.46	chr8	+	3698	12	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	12249	154	-8164	-154	3prime_fragment	FALSE	canonical	3	573	junction_2	37.9050575573993	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	125602020	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.47	chr8	+	3339	11	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-6978	-138	intron_retention	FALSE	canonical	3	573	junction_2	39.7377654127657	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTGACACACTTCCAT	NA	False	NA	NA	False	AATAAA	-28	NA	125603206	125616658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.48	chr8	+	1572	11	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	14401	515	-6012	-6	3prime_fragment	FALSE	canonical	3	573	junction_1	34.1146596055127	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTCTTGGGCAGCA	NA	False	NA	5	True	AATAAA	-10	NA	125604172	125616281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.49	chr8	+	3221	6	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-1000	-3	intron_retention	FALSE	canonical	3	609	junction_5	32.8292552458931	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACCCAATGGTCTTATT	NA	False	NA	31	True	AATAAA	-22	NA	125609184	125616793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.5	chr8	+	2515	14	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-14	-137	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	171.5210753521	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACACACTTCCATC	5145	False	NA	NA	False	AATAAA	-29	NA	125589796	125616659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125590052_125597514_125597698_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.50	chr8	+	4728	4	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-393	-5	intron_retention	FALSE	canonical	3	609	junction_3	7.54247233265651	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACCCAATGGTCTTA	NA	False	NA	29	True	AATAAA	-20	NA	125609791	125616791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.51	chr8	+	2903	6	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-289	-154	intron_retention	FALSE	canonical	0	0	junction_2	258.565736322507	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	125609895	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125611784_125612533_125612675_125613432_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.52	chr8	+	4758	2	FSM	ENSMUSG00000031985.10	ENSMUST00000162192.2	664	2	-952	-3142	-952	-8	multi-exon	FALSE	canonical	3	625	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	NA	False	NA	26	True	AATAAA	-17	NA	125611283	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125612675_125613421
ES.34277.53	chr8	+	2219	5	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-834	-154	intron_retention	FALSE	canonical	3	609	junction_4	34.5425462292518	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACAAAAGCTTTAAA	NA	False	NA	NA	False	AATAAA	-12	NA	125611401	125616642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
ES.34277.54	chr8	+	1763	5	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	22171	8	-293	-8	3prime_fragment	FALSE	canonical	3	609	junction_4	9.62743475698485	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	NA	False	NA	26	True	AATAAA	-17	NA	125611942	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.6	chr8	+	2993	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	162.008586878049	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	5149	False	NA	26	True	AATAAA	-17	NA	125589800	125616788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600911_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34277.7	chr8	+	4405	15	ISM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	30	1	-9	-1	intron_retention	FALSE	canonical	3	573	junction_6	36.72373419277	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAATGGTCTTATTAA	5150	False	NA	33	True	AATAAA	-24	NA	125589801	125616795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496
ES.34277.8	chr8	+	2139	10	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-9	-2646	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	199.571825617362	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATAATGGCTTTGTCTGT	5150	False	NA	NA	False	AAGAAA	-23	NA	125589801	125610821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590013_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094
ES.34277.9	chr8	+	2710	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	-9	-152	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_3	145.263653020599	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACAAAAGCTTTAAATC	5150	False	NA	NA	False	AATAAA	-14	NA	125589801	125616644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125590052_125597514_125597698_125600071_125600249_125601049_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ES.34278.1	chr8	-	4357	6	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	2	2	intron_retention	FALSE	canonical	3	1367	junction_2	157.719244228471	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTTTTGCCTACAT	NA	False	NA	NA	False	AATAAA	-28	NA	125589751	125563681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
ES.34278.11	chr8	-	18880	4	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	5722	-1543	5567	0	intron_retention	FALSE	canonical	3	1367	junction_2	116.003831354352	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125584137	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425
ES.34278.12	chr8	-	5124	5	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	20	0	intron_retention	FALSE	canonical	3	1517	junction_1	125.160646770461	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589733	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125566706_125567186_125568120_125568425_125569159_125587684_125588011_125589623
ES.34278.15	chr8	-	4266	6	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	1367	junction_1	153.696323963848	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589761	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.2	chr8	-	3905	8	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	721.36551351006	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTTTTGCCTACAT	NA	False	NA	NA	False	AATAAA	-28	NA	125589752	125563681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125581640_125581768_125587684_125588011_125589623
ES.34278.22	chr8	-	4468	7	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	1	-15	intron_retention	FALSE	canonical	1	6	junction_5	750.816000539857	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAAACATGT	NA	False	NA	NA	False	AATAAA	-11	NA	125589752	125563698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125581640_125581768_125587684_125588011_125589623
ES.34278.28	chr8	-	3594	9	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	1	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	701.986455976894	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTCATTAAAAAAAAAAC	NA	False	NA	NA	False	AATAAA	-2	NA	125589752	125563707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125565618_125565704_125566495_125566565_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.29	chr8	-	1437	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	87	816	-19	-816	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAGCTGTAACCTCAC	NA	False	NA	43	True	NA	NA	NA	125589772	125566042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.3	chr8	-	3785	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	98	-1543	-8	0	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589761	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.30	chr8	-	1943	6	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	2	-869	intron_retention	FALSE	canonical	3	1367	junction_2	157.719244228471	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGACTGTTAAGTAG	NA	False	NA	-10	True	AATACA	-14	NA	125589751	125566095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
ES.34278.33	chr8	-	2047	7	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	22	-872	intron_retention	FALSE	canonical	1	6	junction_5	750.816000539857	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTCTGACTGTTAAG	NA	False	NA	-13	True	AATACA	-11	NA	125589731	125566098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125581640_125581768_125587684_125588011_125589623
ES.34278.34	chr8	-	1283	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	92	965	-14	-965	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGGTTCTGTGGGAA	NA	False	NA	-106	True	NA	NA	NA	125589767	125566191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.35	chr8	-	1080	1	Intergenic	novelGene_27914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTCTTCTGAAAACATT	NA	False	NA	NA	False	NA	NA	NA	125573720	125572640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125572600_125573700
ES.34278.36	chr8	-	4310	1	Intergenic	novelGene_27915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTATCCATAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	125577123	125572813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125572800_125577100
ES.34278.37	chr8	-	2535	2	FSM	ENSMUSG00000031984.9	ENSMUST00000212808.2	3663	2	-29	1157	20	-1157	multi-exon	FALSE	canonical	3	1845	junction_1	0	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTCTGTCCTTTGA	NA	False	NA	NA	False	NA	NA	NA	125589733	125585585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125588011_125589623
ES.34278.38	chr8	-	2073	2	FSM	ENSMUSG00000031984.9	ENSMUST00000212808.2	3663	2	-28	1618	21	-1618	multi-exon	FALSE	canonical	3	1845	junction_1	0	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTACTGCAAAACACTTCT	NA	False	NA	NA	False	NA	NA	NA	125589732	125586046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125588011_125589623
ES.34278.4	chr8	-	3717	8	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	150	junction_1	523.121595885347	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589778	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125565620_125565704_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34278.5	chr8	-	4817	5	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	1367	junction_1	171.654267351558	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589732	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
ES.34278.6	chr8	-	4236	7	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	-13	0	intron_retention	FALSE	non_canonical	2	150	junction_1	555.346338383135	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589717	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125565620_125565704_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
ES.34278.8	chr8	-	4438	8	NNC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	714.812034662231	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589753	125563683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125565620_125565704_125566706_125567186_125567799_125567839_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ES.34279.1	chr8	-	176	1	Intergenic	novelGene_27916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125607661	125607485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125607500_125607700
ES.3428.1	chr10	-	178	1	Intergenic	novelGene_2644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	82270432	82270254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82270300_82270400
ES.34280.1	chr8	-	5666	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	15	-1083	15	1083	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTGTGTGCGCAATATA	NA	False	NA	NA	False	AGTAAA	-16	NA	125624429	125618763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125618800_125624400
ES.34280.2	chr8	-	5471	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-66	-807	-66	807	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGAACTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	125624510	125619039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125619000_125624500
ES.34280.3	chr8	-	3132	2	Genic_Genomic	ENSMUSG00000074030.4	novel	4598	1	NA	NA	1871	772	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125622573	125619074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_125620514_125620880
ES.34280.4	chr8	-	4676	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-75	-3	-75	3	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGAACTTTATTCTG	NA	False	NA	-21	True	AATAAA	-24	NA	125624519	125619843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125619800_125624500
ES.34280.5	chr8	-	4397	2	Genic_Genomic	ENSMUSG00000074030.4	novel	4598	1	NA	NA	-69	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGAAGTAGAGAACTT	NA	False	NA	-28	True	AATAAA	-17	NA	125624513	125619850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_-_125620617_125620882
ES.34280.6	chr8	-	4089	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	29	480	29	-480	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGGCTTCTGCAGTGA	NA	False	NA	NA	False	AATAAA	-36	NA	125624415	125620326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125620300_125624400
ES.34280.7	chr8	-	2753	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	56	1789	56	-1789	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAAAAGTAGCATGTT	NA	False	NA	NA	False	TATAAA	-21	NA	125624388	125621635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125621600_125624400
ES.34280.8	chr8	-	2381	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	-20	2237	-20	-2237	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTCAAAAGGAGAAAGATAA	NA	False	NA	NA	False	TATAAA	-20	NA	125624464	125622083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125622100_125624500
ES.34281.1	chr8	+	4509	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	-41	-4	-41	4	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTCTTTCCGGTTT	NA	False	NA	13	True	AATAAA	-22	NA	125624583	125632904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ES.34281.10	chr8	+	4179	4	ISM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	979	0	979	0	3prime_fragment	FALSE	canonical	3	61	junction_3	8.01387685344754	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGATGTGTCTTTCCG	NA	False	NA	9	True	AATAAA	-18	NA	125625603	125632900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125625915_125626945_125627075_125628363_125628632_125629429
ES.34281.11	chr8	+	4028	5	NNC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	1234	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.2647030564723	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTTGATGTGTCTTT	NA	False	NA	6	True	AATAAA	-15	NA	125625858	125632897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125625915_125626945_125627075_125628363_125628632_125628771_125628879_125629429
ES.34281.12	chr8	+	5117	1	Genic_Genomic	ENSMUSG00000031986.7	novel	NA	NA	NA	NA	-769	1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGATGTGTCTTTCCGG	NA	False	NA	10	True	AATAAA	-19	NA	125627784	125632901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_125627800_125632900
ES.34281.2	chr8	+	4361	4	NIC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.7786652353933	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGATGTGTCTTTCCG	NA	False	NA	9	True	AATAAA	-18	NA	125624598	125632900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125625121_125625814_125625915_125628363_125628632_125629429
ES.34281.3	chr8	+	4394	6	NNC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.7662152368471	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGATGTGTCTTTCCG	NA	False	NA	9	True	AATAAA	-18	NA	125624628	125632900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429_125632385_125632450
ES.34281.4	chr8	+	4684	5	NNC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0809522925988	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTTGATGTGTCTTT	NA	False	NA	6	True	AATAAA	-15	NA	125624633	125632897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125625353_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ES.34281.5	chr8	+	2369	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	10	2085	10	1011	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTCTTAGTAACTTATA	NA	False	NA	NA	False	CATAAA	-24	NA	125624634	125630815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ES.34281.7	chr8	+	4222	5	NNC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	219	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0809522925988	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATGTGTCTTTCCGGTT	NA	False	NA	12	True	AATAAA	-21	NA	125624843	125632903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125625095_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ES.34281.8	chr8	+	5007	4	ISM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	256	-1	256	1	intron_retention	FALSE	canonical	3	78	junction_2	1.88561808316413	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGATGTGTCTTTCCGG	NA	False	NA	10	True	AATAAA	-19	NA	125624880	125632901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363
ES.34281.9	chr8	+	4443	5	NIC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	265	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	33.0936172093653	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTTGATGTGTCTTT	NA	False	NA	6	True	AATAAA	-15	NA	125624889	125632897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628879_125629429
ES.34282.1	chr8	+	176	1	Intergenic	novelGene_27917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125661509	125661685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125661500_125661700
ES.34283.1	chr8	+	6240	1	Intergenic	novelGene_27918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCTTAGAAATGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	125666262	125672502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125666300_125672500
ES.34284.1	chr8	-	3845	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-233	-18	-233	18	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTCGTCTGTTTGCCCG	NA	False	NA	1	True	TATAAA	-36	NA	125676296	125635307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ES.34284.10	chr8	-	1958	6	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	71	-1623	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	148.816665733378	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTTGCCAGTGAGTG	NA	False	NA	-9	True	ATTAAA	-24	NA	125675992	125636948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125637503_125638479_125638548_125640755_125640819_125642399_125642520_125644545_125644678_125674971
ES.34284.11	chr8	-	1862	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	-29	-1624	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	128.380510808906	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTTGCCAGTGAGT	NA	False	NA	-10	True	ATTAAA	-23	NA	125676092	125636949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125637503_125638479_125638548_125642399_125642520_125674971
ES.34284.12	chr8	-	3468	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	3	-1630	intron_retention	FALSE	canonical	3	265	junction_3	24.9131825880731	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGATGATTGTTGCCA	NA	False	NA	-16	True	ATTAAA	-17	NA	125676060	125636955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125637503_125638479_125638548_125640755_125642520_125674971
ES.34284.13	chr8	-	2235	5	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	88	-1631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.413696281051	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCGATGATTGTTGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	125675975	125636956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125637503_125638479_125638548_125640755_125640893_125642039_125642520_125674971
ES.34284.14	chr8	-	3440	2	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	160	-4686	intron_retention	FALSE	canonical	3	265	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCGGTCTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	125675903	125640011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125642520_125674971
ES.34284.15	chr8	-	1662	3	ISM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	191	4926	191	-4926	5prime_fragment	FALSE	canonical	3	265	junction_2	4.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAAGGGCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	125675872	125640251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125640893_125642399_125642520_125674971
ES.34284.16	chr8	-	1213	2	ISM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	1	7072	1	-7072	5prime_fragment	FALSE	canonical	3	265	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACTCAATTCAGCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	125676062	125642397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_125642520_125674971
ES.34284.17	chr8	-	1825	2	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	-56	-19416	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAATAAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	125676119	125654741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125655419_125674971
ES.34284.2	chr8	-	3818	5	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	193	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.413696281051	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGTCACCTCCAGCT	NA	False	NA	-15	True	ATTAAA	-32	NA	125675870	125635323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125637503_125638479_125638548_125640755_125640893_125641984_125642520_125674971
ES.34284.3	chr8	-	8287	2	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	1	2	intron_retention	FALSE	canonical	3	265	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGTCACCTCCAGCT	NA	False	NA	-15	True	ATTAAA	-32	NA	125676062	125635323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125642520_125674971
ES.34284.4	chr8	-	3523	6	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	27	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	116.181582017117	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTTGTCACCTCCAGC	NA	False	NA	-16	True	ATTAAA	-31	NA	125676036	125635324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971_125675769_125675813
ES.34284.5	chr8	-	3374	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	74	-9	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	128.380510808906	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	-26	True	ATTAAA	-21	NA	125675989	125635334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_125637503_125638479_125638548_125642399_125642520_125674971
ES.34284.6	chr8	-	3727	6	NNC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	144.557808505802	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATAACTGTTGT	NA	False	NA	-26	True	ATTAAA	-21	NA	125676073	125635334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125644545_125644678_125674971
ES.34284.8	chr8	-	2217	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	-237	1614	-237	-1614	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGAGTGACGACGTGT	NA	False	NA	0	True	ATTAAA	-33	NA	125676300	125636939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ES.34285.1	chr8	-	188	1	Intergenic	novelGene_27919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATAAAAAAATATATTT	4818	False	NA	NA	False	NA	NA	NA	125694663	125694475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125694500_125694700
ES.34286.1	chr8	-	1118	3	Intergenic	novelGene_27920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAAATCTGGGCTGTG	2685	False	NA	NA	False	AATAAA	-22	NA	125696796	125695408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125695782_125695939_125696485_125696596
ES.34287.1	chr8	+	1455	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	-134	848	-82	-848	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCTCCTCTAGTGTGT	5112	False	NA	NA	False	AATAAA	-39	NA	125739653	125756312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ES.34287.10	chr8	+	657	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	-5	1517	-5	-1517	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCATGTTTCCGTTGT	5241	False	NA	NA	False	NA	NA	NA	125739782	125755643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ES.34287.11	chr8	+	5933	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	10	-3774	10	3	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTGGTTAAGCTTTTA	5256	False	NA	12	True	AATAAA	-17	NA	125739797	125760934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ES.34287.12	chr8	+	2333	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	217.190791701674	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCTGGTTAAGCTTTT	5263	False	NA	11	True	AATAAA	-16	NA	125739804	125760933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740254_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759220
ES.34287.13	chr8	+	5839	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	175.789647021661	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTCTGGTTAAGCTT	5263	False	NA	9	True	AATAAA	-14	NA	125739804	125760931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125756583_125756666
ES.34287.14	chr8	+	2136	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	18	15	18	-15	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAACCAAAAA	5264	False	NA	NA	False	NA	NA	NA	125739805	125757145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ES.34287.15	chr8	+	2246	6	NNC	ENSMUSG00000056820.8	novel	2169	5	NA	NA	26	187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	175.789647021661	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCTCTCATCTCCTGC	5272	False	NA	NA	False	AATATA	-26	NA	125739813	125757347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125756583_125756666
ES.34287.16	chr8	+	5829	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	27	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	175.789647021661	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCTGGTTAAGCTTT	5273	False	NA	10	True	AATAAA	-15	NA	125739814	125760932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125756602_125756686
ES.34287.17	chr8	+	2315	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	214	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.202132422707	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATATTAAAATACA	5460	False	NA	-11	True	TTTAAA	-10	NA	125740001	125760911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125740162_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ES.34287.18	chr8	+	2160	3	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	11307	-2	11255	2	3prime_fragment	FALSE	canonical	3	431	junction_2	13	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCTGGTTAAGCTTTT	7290	False	NA	11	True	AATAAA	-16	NA	125751042	125760933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_125751377_125755506_125755635_125759235
ES.34287.2	chr8	+	2477	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	-129	-179	-77	179	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGCACACCTCTCTCA	5117	False	NA	NA	False	AATATA	-18	NA	125739658	125757339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ES.34287.3	chr8	+	2462	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	-64	-7	-64	7	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTAAGCTTTTAAGCT	5130	False	NA	16	True	AATAAA	-21	NA	125739671	125760938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ES.34287.4	chr8	+	2450	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	-63	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	173.008207897776	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCTGGTTAAGCTTTT	5131	False	NA	11	True	AATAAA	-16	NA	125739672	125760933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740254_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ES.34287.5	chr8	+	2132	6	NNC	ENSMUSG00000056820.8	novel	2169	5	NA	NA	-17	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	175.789647021661	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAACCAAAAA	5177	False	NA	NA	False	NA	NA	NA	125739718	125757145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125756583_125756673
ES.34287.6	chr8	+	2157	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	0	20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	175.789647021661	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTTATTAATAATTTT	5194	False	NA	NA	False	NA	NA	NA	125739735	125757180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125756583_125756666
ES.34287.7	chr8	+	2373	6	NNC	ENSMUSG00000056820.8	novel	2169	5	NA	NA	1	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.598588894658	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTTATTAATAATTTT	5195	False	NA	NA	False	NA	NA	NA	125739736	125757180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125739952_125740248_125740354_125742393_125742509_125750514_125750648_125751245_125751377_125755506
ES.34287.9	chr8	+	2146	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	46	199	-6	-199	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTGTTGTCCTGGTGGT	5240	False	NA	NA	False	AATAAA	-23	NA	125739781	125760732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ES.34288.1	chr8	-	159	1	Intergenic	novelGene_27921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAACCA	NA	False	NA	NA	False	NA	NA	NA	125744955	125744796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125744800_125745000
ES.34289.1	chr8	+	6381	1	Intergenic	novelGene_27922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCATGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125760973	125767354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125761000_125767400
ES.3429.1	chr10	+	186	1	Intergenic	novelGene_2645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAAATTTTGTATTCAT	NA	False	NA	18	True	NA	NA	NA	82444256	82444442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82444300_82444400
ES.34290.1	chr8	-	159	1	Intergenic	novelGene_27923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTGAGCGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	125775358	125775199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_125775200_125775400
ES.34291.1	chr8	+	2974	8	NNC	ENSMUSG00000043051.18	novel	2597	13	NA	NA	343	64239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.9045976991969	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGATTGTTACAGGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	125815068	125893856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125815188_125817111_125817182_125851234_125851380_125858801_125858923_125862012_125862249_125875150_125875206_125881746_125881850_125891731
ES.34291.2	chr8	+	5162	13	NIC	ENSMUSG00000043051.18	novel	2597	13	NA	NA	347	3272	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	5.48229473446618	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCACAATGCCCCCTG	NA	False	NA	NA	False	AATAAA	-10	NA	125815072	125991869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125815188_125817111_125817182_125851231_125851380_125858801_125858923_125862012_125862249_125875150_125875206_125881746_125881850_125891731_125891921_125944835_125944897_125959522_125959797_125977686_125977807_125987755_125987891_125988334
ES.34291.3	chr8	+	2664	1	NIC	ENSMUSG00000043051.18	novel	2597	13	NA	NA	356	11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGCCAGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	125815081	125817745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_125815100_125817700
ES.34291.4	chr8	+	3014	10	NNC	ENSMUSG00000043051.18	novel	2597	13	NA	NA	363	-8246	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	6.18241233033047	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTAAGAGTCTTGATT	NA	False	NA	NA	False	NA	NA	NA	125815088	125979641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_125815188_125817111_125817182_125851231_125851380_125858801_125858923_125862012_125862223_125875147_125875206_125881746_125881850_125891731_125891921_125944835_125944897_125977686
ES.34291.5	chr8	+	1939	1	Intergenic	novelGene_27924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAATAAAGCACCAA	NA	False	NA	NA	False	NA	NA	NA	125946380	125948319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125946400_125948300
ES.34292.1	chr8	-	1681	2	Antisense	novelGene_ENSMUSG00000043051.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTACTTTCTCTTTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	125903986	125902245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_125902311_125902370
ES.34293.1	chr8	+	144	1	Intergenic	novelGene_27925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGTCAGACTCTGAA	130	False	NA	NA	False	NA	NA	NA	125995570	125995714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_125995600_125995700
ES.34294.1	chr8	+	1247	2	Intergenic	novelGene_27926	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	126054624	126063239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126054863_126062230
ES.34294.2	chr8	+	4687	2	Intergenic	novelGene_27927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTTTTATGTTTGATA	NA	False	NA	NA	False	ATTAAA	-29	NA	126054678	126066733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126054863_126062230
ES.34295.1	chr8	+	2353	1	Antisense	novelGene_ENSMUSG00000001995.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	126205466	126207819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_126205500_126207800
ES.34296.1	chr8	-	6727	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	-130	-11	-78	0	multi-exon	TRUE	canonical	3	164	junction_19	26.9293187551557	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTGTCTGTGTGGA	NA	False	NA	5	True	AATAAA	-29	NA	126296625	126144801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.10	chr8	-	5010	17	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-51	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	73.2459203215442	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296598	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195453_126218567_126219405_126246584_126246646_126296393
ES.34296.11	chr8	-	6537	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-26	5	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	49.3409312842796	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296573	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.12	chr8	-	6655	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-36	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	75.3431153723657	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296583	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126233963_126234072_126246584_126246646_126296393
ES.34296.13	chr8	-	6571	21	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	68.1011013126807	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126296549	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196633_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126296393
ES.34296.15	chr8	-	6209	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.9472958097928	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126296564	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195041_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.16	chr8	-	4655	18	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	13168	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	55.6842308379477	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126206281	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206007
ES.34296.18	chr8	-	7956	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-16	4	intron_retention	FALSE	canonical	3	164	junction_18	27.3164785431798	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126296563	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.19	chr8	-	6971	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-13	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	51.7302001295392	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126296560	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126209237_126217849_126219573_126246584_126246646_126296393
ES.34296.20	chr8	-	6561	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-3	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	53.5831130114703	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTGTTGCCTGTCT	NA	False	NA	-2	True	AATAAA	-22	NA	126296550	126144808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.22	chr8	-	6627	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.5954051604409	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126296546	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178730_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.23	chr8	-	4378	18	ISM	ENSMUSG00000001995.10	ENSMUST00000108775.2	6365	21	17767	9	17767	2	3prime_fragment	FALSE	canonical	0	0	junction_4	74.6292798555949	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126201682	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126149931_126149986_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562
ES.34296.25	chr8	-	5898	20	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	303	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	53.9365072506965	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126219146	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195390_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ES.34296.26	chr8	-	4933	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	52.5475736832825	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126296563	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126246584_126246646_126296393
ES.34296.29	chr8	-	4929	20	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	10043	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	53.7057232438152	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126209406	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126209179
ES.34296.3	chr8	-	6365	21	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_19	63.1723634194574	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTTGCCTGTCTGTGT	NA	False	NA	2	True	AATAAA	-26	NA	126296566	126144804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126246584_126246646_126296393
ES.34296.30	chr8	-	5703	17	ISM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	93434	-2	16388	2	3prime_fragment	FALSE	canonical	3	191	junction_16	20.6495119494384	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCAGTGTTGCCTGT	NA	False	NA	-4	True	AATAAA	-20	NA	126203061	126144810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562
ES.34296.31	chr8	-	17132	21	NIC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	-19	0	intron_retention	FALSE	canonical	3	164	junction_18	27.4559192160816	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296566	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.33	chr8	-	5469	22	NNC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.0808349645958	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296554	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126144881_126148645_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.34	chr8	-	5241	20	NNC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	10148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	70.7465923731311	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126209301	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126207824_126207985_126208786
ES.34296.36	chr8	-	4489	18	NNC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	12893	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	56.1235660955385	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126206556	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206444
ES.34296.37	chr8	-	6631	22	NNC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	68.0790190474798	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296564	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196633_126200236_126200329_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.38	chr8	-	5850	12	NIC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	28386	0	intron_retention	FALSE	canonical	3	195	junction_10	17.0313274791626	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126191063	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890
ES.34296.39	chr8	-	6676	22	NNC	ENSMUSG00000001995.10	novel	6586	22	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	52.0571811893295	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296591	126144812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219567_126246584_126246646_126296393
ES.34296.4	chr8	-	6609	23	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.7505459864833	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTTGCCTGTCTGTGT	NA	False	NA	2	True	AATAAA	-26	NA	126296570	126144804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126233963_126234072_126246584_126246646_126296393
ES.34296.41	chr8	-	4380	17	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	13306	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	72.8339024338941	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAGAAGCAGTGTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	126206143	126144813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206007
ES.34296.42	chr8	-	4044	13	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	24276	0	intron_retention	FALSE	canonical	0	0	junction_10	64.7364314397662	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126195173	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180232_126180298_126190890_126191166_126194913
ES.34296.43	chr8	-	4862	20	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	53.7057232438152	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296557	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126296393
ES.34296.44	chr8	-	6494	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	52.5954051604409	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296598	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180232_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.45	chr8	-	6750	23	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	64.8166517733479	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296553	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126233963_126234072_126246584_126246646_126296393
ES.34296.49	chr8	-	9545	19	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	501	0	intron_retention	FALSE	canonical	3	164	junction_18	25.8194705934958	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126218948	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ES.34296.5	chr8	-	6527	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-51	-5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	48.3676397132274	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGTGTTGCCTGTCTGT	NA	False	NA	0	True	AATAAA	-24	NA	126296598	126144806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126246584_126246646_126296393
ES.34296.50	chr8	-	4641	19	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	54.8119399896783	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296598	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126246584_126246646_126296393
ES.34296.51	chr8	-	3181	13	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	29017	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	64.9397156343225	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126190432	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190337
ES.34296.52	chr8	-	6073	23	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	51.4115826098194	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	126296554	126144814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126218611_126219180_126219573_126246584_126246646_126296393
ES.34296.54	chr8	-	6589	23	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-23	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.4115826098194	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGTCAACATCAGAA	NA	False	NA	-18	True	AATAAA	-6	NA	126296570	126144824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126145809_126145868_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.55	chr8	-	6269	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-16	-251	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	49.3409312842796	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTCTTATTTAAGCTTA	NA	False	NA	NA	False	GATAAA	-14	NA	126296563	126145065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.56	chr8	-	5586	16	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	12135	-12689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	57.282768399891	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTCCCGTTGACGT	NA	False	NA	NA	False	AAAACA	-18	NA	126207314	126157503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126207283
ES.34296.57	chr8	-	3351	5	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	17736	-44009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	97.8273351369647	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGATGTTTTTGCTGC	NA	False	NA	NA	False	AATAAA	-10	NA	126201713	126188823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126191166_126194913_126195491_126196486_126196664_126200236_126200341_126201562
ES.34296.58	chr8	-	5539	10	ISM	ENSMUSG00000001995.10	ENSMUST00000212987.2	6690	23	-19	44106	-19	-44106	5prime_fragment	FALSE	canonical	3	164	junction_7	25.1440295541948	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTATGCCTGGTATTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	126296566	126188920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ES.34296.59	chr8	-	5011	9	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-19	-44573	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	67.075983034168	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCTTCTTGGTGTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	126296566	126189387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126296393
ES.34296.60	chr8	-	4901	10	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-20	-44577	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	60.4209513167799	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAATCCTTCTTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	126296567	126189391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126246584_126246646_126296393
ES.34296.7	chr8	-	4751	18	NNC	ENSMUSG00000001995.10	novel	6365	21	NA	NA	16721	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	56.1235660955385	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126202728	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126202359
ES.34296.8	chr8	-	6414	21	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	53.1822103715143	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296547	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126296393
ES.34296.9	chr8	-	6619	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	-37	5	combination_of_known_splicesites	FALSE	canonical	2	10	junction_20	51.2654610824871	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGTGTTGCCTGTCTG	NA	False	NA	-1	True	AATAAA	-23	NA	126296584	126144807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126296393
ES.34297.1	chr8	+	3529	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	17	-4	17	4	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTGTTTATTTTTAAT	NA	False	NA	6	True	AATAAA	-19	NA	126396573	126400102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126400100
ES.34297.2	chr8	+	2941	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	17	584	17	-584	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGTCTTGAAGAAAAGA	NA	False	NA	NA	False	ATTAAA	-20	NA	126396573	126399514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126399500
ES.34297.3	chr8	+	2696	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	17	829	17	-829	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACACAGTGTGAAAGTA	NA	False	NA	NA	False	AATAAA	-11	NA	126396573	126399269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126399300
ES.34297.4	chr8	+	5815	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	17	-2290	17	2290	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCTACCTGCCAGGAC	NA	False	NA	NA	False	ATTAAA	-22	NA	126396573	126402388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126402400
ES.34297.5	chr8	+	4297	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	28	-783	28	783	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTTGGTCCTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	126396584	126400881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126400900
ES.34297.6	chr8	+	3063	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	30	449	30	-449	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCAAAATGTATTTGTG	NA	False	NA	NA	False	AATAAA	-32	NA	126396586	126399649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126399600
ES.34297.7	chr8	+	4155	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	34	-647	34	647	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACATAGCTTGGTACTC	NA	False	NA	NA	False	CATAAA	-24	NA	126396590	126400745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396600_126400700
ES.34297.8	chr8	+	3565	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	302	-325	302	325	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGACATTCCTGGGAC	NA	False	NA	NA	False	AATAAA	-14	NA	126396858	126400423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126396900_126400400
ES.34298.1	chr8	-	3218	1	Intergenic	novelGene_27928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAAGGCTTTTCCGTT	NA	False	NA	NA	False	AATAAA	-19	NA	126410587	126407369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_126407400_126410600
ES.34299.1	chr8	+	2030	2	Intergenic	novelGene_27929	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTGTTCTCATGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	126420298	126422601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126420416_126420688
ES.343.1	chr1	-	6869	12	FSM	ENSMUSG00000048814.12	ENSMUST00000147695.9	6932	12	37	26	37	-26	multi-exon	FALSE	canonical	1	4	junction_1	2.06505758029101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACGAGTTGTAAGATAT	NA	False	NA	NA	False	AATAAA	-25	NA	38875755	38832751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38837305_38839731_38839882_38843319_38843483_38846121_38846281_38846916_38847039_38850792_38850908_38851624_38851722_38852293_38852502_38855045_38855202_38857142_38857266_38860227_38860347_38874851
ES.343.2	chr1	-	6728	12	NNC	ENSMUSG00000048814.12	novel	6932	12	NA	NA	-7	-28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.81084087886187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGACGAGTTGTAAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	38875799	38832753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38833133_38833192_38837305_38839731_38839882_38843319_38843483_38846121_38846281_38846916_38847039_38850792_38850908_38851624_38851722_38852293_38852502_38855045_38855202_38860227_38860347_38874851
ES.343.3	chr1	-	6740	13	NNC	ENSMUSG00000048814.12	novel	6932	12	NA	NA	97	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.56444709223819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGTGAATGACGAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	38875695	38832760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38833133_38833192_38837305_38839731_38839882_38843319_38843483_38846121_38846281_38846916_38847039_38850792_38850908_38851624_38851722_38852293_38852502_38855045_38855202_38857142_38857266_38860227_38860347_38874851
ES.3430.1	chr10	-	6137	7	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	48	6774	intron_retention	TRUE	non_canonical	0	0	junction_5	109.089667501352	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGACCTGCCCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	82458923	82448910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82452627_82453306_82454699_82455149_82458659_82458798
ES.3430.10	chr10	-	4063	7	NNC	ENSMUSG00000063320.12	novel	469	3	NA	NA	-10	6581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	160.92070165837	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCCTATTTTATTTGCC	NA	False	NA	NA	False	NA	NA	NA	82459040	82449103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82454699_82455149_82456052_82458541_82458659_82458986
ES.3430.11	chr10	-	1910	7	NNC	ENSMUSG00000063320.12	novel	637	2	NA	NA	-15	6506	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	108.913829343303	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTGGTTGTTGATT	NA	False	NA	NA	False	NA	NA	NA	82459045	82449178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82452627_82453306_82454010_82458541_82458659_82458798
ES.3430.12	chr10	-	4904	5	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	2172	6504	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.6332495807108	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGCTTGGTTGTTGA	NA	False	NA	NA	False	NA	NA	NA	82456588	82449180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449532_82449590_82450061_82451226_82451465_82452292_82454699_82455149
ES.3430.13	chr10	-	3974	3	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	2	1181	intron_retention	FALSE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	82458969	82454503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82454699_82455149_82457191_82457231
ES.3430.14	chr10	-	1406	4	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	-21	1179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	186.908771567545	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTTGTGCCCAGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	82458992	82454505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82454699_82455149_82456052_82458541_82458659_82458798
ES.3430.15	chr10	-	745	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	-36	7	-4	-7	multi-exon	FALSE	canonical	3	302	junction_2	73.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	-7	True	NA	NA	NA	82459066	82455691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82456052_82458541_82458659_82458798
ES.3430.16	chr10	-	622	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	-48	-168	-10	-7	multi-exon	FALSE	canonical	3	187	junction_2	131	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	-7	True	NA	NA	NA	82459072	82455691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82456052_82458541_82458659_82458927
ES.3430.17	chr10	-	508	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	45	-84	7	-7	multi-exon	FALSE	canonical	3	100	junction_2	174.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	False	NA	-7	True	NA	NA	NA	82459017	82455691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82456052_82458541_82458659_82458986
ES.3430.19	chr10	-	1622	1	NIC	ENSMUSG00000063320.12	novel	586	2	NA	NA	1446	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGATAGTCTTACTATAC	NA	False	NA	-8	True	NA	NA	NA	82457314	82455692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82455700_82457300
ES.3430.2	chr10	-	5391	2	Intergenic	novelGene_2646	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGACCTGCCCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	82454360	82448910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82449532_82449590
ES.3430.21	chr10	-	528	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	13	175	7	0	multi-exon	FALSE	canonical	3	302	junction_2	73.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	0	True	AGTAAA	-20	NA	82459017	82455859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82456052_82458541_82458659_82458798
ES.3430.3	chr10	-	3446	8	NNC	ENSMUSG00000063320.12	novel	469	3	NA	NA	-17	6605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	151.799411146716	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTGTCTACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	82459079	82449079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82452627_82453306_82454699_82455149_82456052_82458541_82458659_82458986
ES.3430.4	chr10	-	4940	5	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	2708	6588	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.8949130612758	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTTGCCCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	82456052	82449096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449487_82449543_82451465_82452292_82452627_82453306_82454699_82455149
ES.3430.5	chr10	-	3564	6	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	2918	6588	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.74091981854109	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTTGCCCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	82455842	82449096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449507_82449563_82450061_82451226_82451465_82452292_82452627_82453306_82454699_82455149
ES.3430.6	chr10	-	2724	6	Intergenic	novelGene_2647	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	5.85149553533112	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTTGCCCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	82455635	82449096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82449333_82450022_82450061_82451226_82451465_82452292_82452627_82453306_82454699_82455149
ES.3430.8	chr10	-	3578	8	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	-10	6588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	169.966743445743	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTTGCCCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	82459040	82449096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82452627_82453306_82454699_82455149_82456052_82458541_82458659_82458798
ES.3430.9	chr10	-	3123	8	NNC	ENSMUSG00000063320.12	novel	716	3	NA	NA	-2	6587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	154.295370068223	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTATTTGCCCCTGTT	NA	False	NA	NA	False	NA	NA	NA	82458762	82449097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82449333_82449943_82450061_82451226_82451465_82452292_82452627_82453306_82454277_82454592_82454699_82455149_82456052_82458541
ES.34300.1	chr8	+	4560	3	Intergenic	novelGene_27931	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAGAGGACCCATCCC	8869	False	NA	NA	False	NA	NA	NA	126431437	126446489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126431674_126435770_126435839_126442233
ES.34300.2	chr8	+	1638	3	Intergenic	novelGene_27930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGGGCACAGAGCCCAC	8869	False	NA	NA	False	ATTAAA	-19	NA	126431437	126443562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126431679_126435770_126435839_126442233
ES.34301.1	chr8	-	466	1	Intergenic	novelGene_27932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTTGGTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	126446905	126446439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_126446400_126446900
ES.34302.1	chr8	-	168	1	Intergenic	novelGene_27933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGTGTGAAGTTT	NA	False	NA	0	True	NA	NA	NA	126452850	126452682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_126452700_126452800
ES.34303.1	chr8	+	1042	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	-34	489	1	-489	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATGTGTCTGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	126460942	126465429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ES.34303.2	chr8	+	1009	4	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	-11	-25	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_2	46.2913478836908	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGTGGTGGTTCAG	NA	False	NA	-2	True	AATAAA	-6	NA	126460960	126474949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_126461089_126462806_126462965_126471974_126472185_126474436
ES.34303.3	chr8	+	1506	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	-13	4	-8	-4	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCATGTCTAATTAG	NA	False	NA	NA	False	ACTAAA	-11	NA	126460963	126465914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ES.34303.4	chr8	+	1004	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	25	126	-5	75	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTGGTTCTCTTCAA	NA	False	NA	29	True	ATTAAA	-44	NA	126460966	126474848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ES.34303.6	chr8	+	1118	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	32	5	2	-5	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACACAGGAGTCCTTGT	NA	False	NA	18	True	AATAAA	-26	NA	126460973	126474969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ES.34303.9	chr8	+	1023	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	60	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	39.6949304067912	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAGACACAGGAGTCC	NA	False	NA	14	True	AATAAA	-22	NA	126461036	126474965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_126461089_126462806_126462942_126464061_126464159_126471974_126472185_126474436
ES.34304.1	chr8	-	4259	21	ISM	ENSMUSG00000060212.14	ENSMUST00000047239.13	7236	34	47126	-4	-11341	4	3prime_fragment	TRUE	canonical	2	2	junction_9	2.04633819296811	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTACTGTCCTTCC	7770	False	NA	NA	False	ATTAAA	-18	NA	126577930	126478242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126566322_126566433_126577021_126577114_126577758
ES.34304.3	chr8	-	4136	20	NIC	ENSMUSG00000060212.14	novel	7236	34	NA	NA	-11334	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	2.46863987359128	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGTCTGTCTACTGT	7777	False	NA	NA	False	ATTAAA	-12	NA	126577923	126478248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126577021_126577114_126577758
ES.34304.4	chr8	-	3598	16	NIC	ENSMUSG00000060212.14	novel	7236	34	NA	NA	-11280	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	3.21385887818505	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGCTGTCTGTCTACTG	7831	False	NA	NA	False	ATTAAA	-11	NA	126577869	126478249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126542399_126542578_126545407_126545550_126564675_126564773_126577021_126577114_126577758
ES.34304.5	chr8	-	5249	1	NIC	ENSMUSG00000060212.14	novel	7236	34	NA	NA	6110	-11259	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTAATCTGAAACTGGAA	NA	False	NA	NA	False	NA	NA	NA	126494757	126489508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_126489500_126494800
ES.34304.6	chr8	-	3101	4	ISM	ENSMUSG00000060212.14	ENSMUST00000131127.3	3782	17	47133	-2307	-11334	2307	3prime_fragment	FALSE	canonical	2	5	junction_1	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAACAAAAAACCTGCCT	7777	False	NA	NA	False	NA	NA	NA	126577923	126562038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126564773_126566322_126566433_126577021_126577114_126577758
ES.34304.7	chr8	-	797	4	ISM	ENSMUSG00000060212.14	ENSMUST00000131127.3	3782	17	47130	0	-11337	0	3prime_fragment	FALSE	canonical	2	5	junction_1	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAGGACGACATTCCTG	7774	False	NA	NA	False	AATAAA	-19	NA	126577926	126564345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_126564773_126566322_126566433_126577021_126577114_126577758
ES.34305.1	chr8	-	181	1	Intergenic	novelGene_27934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTTGTTCTTTATA	NA	False	NA	NA	False	NA	NA	NA	126650366	126650185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_126650200_126650400
ES.34306.1	chr8	+	3543	2	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	31148	2	31148	-2	3prime_fragment	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTGGCTTAGTGGCT	5390	False	NA	NA	False	AATAAA	-16	NA	126668336	126674177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_126669051_126671348
ES.34307.1	chr8	+	2225	5	NNC	ENSMUSG00000033998.10	novel	1309	4	NA	NA	-34866	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.8181008805496	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGTTTATTACAAC	NA	False	NA	20	True	AATAAA	-17	NA	126687042	126757423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_126687171_126721155_126721264_126722153_126722554_126751750_126752147_126756230
ES.34307.2	chr8	+	285	2	Intergenic	novelGene_27935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTGTCTCGACTCAT	NA	False	NA	NA	False	NA	NA	NA	126687048	126691424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126687171_126691261
ES.34307.3	chr8	+	1579	4	FSM	ENSMUSG00000033998.10	ENSMUST00000212831.2	1309	4	-270	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_3	57.0438427878066	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGGTTTATTACAA	NA	False	NA	19	True	AATAAA	-16	NA	126721904	126757422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126722554_126751750_126752147_126756230_126756432_126757089
ES.34307.4	chr8	+	2232	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	1	2	1	0	multi-exon	FALSE	canonical	3	118	junction_2	9	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGGTTTATTACAA	NA	False	NA	19	True	AATAAA	-16	NA	126721909	126757422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126722554_126751750_126752147_126756230
ES.34307.5	chr8	+	2610	2	ISM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	112	3597	112	-3595	5prime_fragment	FALSE	canonical	3	136	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATATATTTTTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	126722020	126753827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_126722554_126751750
ES.34307.6	chr8	+	1291	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	114	830	114	-828	multi-exon	FALSE	canonical	3	118	junction_2	9	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGGAACTTTG	NA	False	NA	NA	False	AAGAAA	-23	NA	126722022	126756594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126722554_126751750_126752147_126756230
ES.34307.7	chr8	+	1870	3	NNC	ENSMUSG00000033998.10	novel	1309	4	NA	NA	120	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTGGTTTATTACAA	NA	False	NA	19	True	AATAAA	-16	NA	126722028	126757422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_126722554_126751993_126752147_126756230
ES.34307.8	chr8	+	3612	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	228	-1605	-38	1605	multi-exon	FALSE	canonical	3	118	junction_2	9	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGCGTTTTATGACC	NA	False	NA	NA	False	GATAAA	-31	NA	126722136	126759029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_126722554_126751750_126752147_126756230
ES.34308.1	chr8	-	154	1	Intergenic	novelGene_27936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	126737094	126736940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_126736900_126737100
ES.34309.1	chr8	+	2127	3	Antisense	novelGene_ENSMUSG00000110698.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACCATGCCATTGTTA	NA	False	NA	NA	False	AATAAA	-32	NA	126770033	126775092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_126770156_126772167_126772404_126773323
ES.3431.1	chr10	+	1733	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	-48	1817	-17	103	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCGGTTTTCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	82465644	82484816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.10	chr10	+	3502	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCTAACTTGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	82465693	82486634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.11	chr10	+	5371	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	1	-47	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	444.826977599156	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATGCGCAGTCTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	82465693	82486111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481480_82481522_82483228_82483786_82483913_82484414
ES.3431.12	chr10	+	2985	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	1	516	1	-41	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTCTGAGCGTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	82465693	82486117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.13	chr10	+	3482	9	ISM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	1	518	1	-43	intron_retention	FALSE	canonical	3	474	junction_8	263.237535317439	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	82465693	82486115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786
ES.3431.14	chr10	+	3395	10	NIC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	348.033345926139	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCGGCTAACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	82465694	82486630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
ES.3431.15	chr10	+	2920	10	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	2	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	438.006031865564	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465694	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474593_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.16	chr10	+	5319	9	NIC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	2	-46	intron_retention	FALSE	canonical	0	0	junction_8	382.506127401902	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465694	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82465774_82474534_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.17	chr10	+	5320	11	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	456.010844169303	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCTTAGTATACAGGT	NA	False	NA	NA	False	AATAAA	-12	NA	82465694	82486156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481472_82481513_82483228_82483786_82483913_82484411
ES.3431.18	chr10	+	7760	11	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	3	-46	intron_retention	TRUE	non_canonical	0	0	junction_7	477.233863006388	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465695	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465774_82474534_82477392_82477854_82477925_82479120_82479180_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481460_82481514_82483228_82483786_82483913_82484411
ES.3431.2	chr10	+	4022	11	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	-7	105	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	456.010844169303	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTTTTCTCTGAGGA	NA	False	NA	NA	False	NA	NA	NA	82465654	82484818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481472_82481513_82483228_82483786_82483913_82484411
ES.3431.21	chr10	+	2867	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	4	631	4	-156	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTACTTCCTGGTG	NA	False	NA	NA	False	TTTAAA	-28	NA	82465696	82486002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.22	chr10	+	3141	11	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	5	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	459.576772694182	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465697	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465774_82468122_82468387_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.23	chr10	+	4079	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	5	108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	456.753204695928	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTTTTCTCTGAGGAGTC	NA	False	NA	NA	False	AAGAAA	-1	NA	82465697	82484821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481470_82481513_82483228_82483786_82483913_82484411
ES.3431.24	chr10	+	3379	9	ISM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	36	43	5	-43	intron_retention	FALSE	canonical	3	474	junction_8	272.214988566023	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	82465697	82486115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786
ES.3431.25	chr10	+	3267	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	448.076154241665	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465713	82486158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82468122_82468387_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
ES.3431.27	chr10	+	5342	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	18	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	456.753204695928	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465727	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481472_82481513_82483228_82483786_82483913_82484411
ES.3431.29	chr10	+	6563	9	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	64	-43	intron_retention	FALSE	non_canonical	0	0	junction_7	437.491410629969	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	82465773	82486115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82479120_82479180_82480003_82480368_82480448_82481272_82481345_82481474_82481513
ES.3431.3	chr10	+	5424	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-7	-41	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	456.753204695928	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTCTGAGCGTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	82465654	82486117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481462_82481499_82483228_82483786_82483913_82484411
ES.3431.30	chr10	+	5175	10	NNC	ENSMUSG00000034674.19	novel	736	7	NA	NA	303	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	434.216990756613	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82466012	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82468387_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ES.3431.31	chr10	+	5181	10	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	-2464	-46	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	480.677479716049	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82474531	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481456_82481516_82483228_82483786_82483913_82484411
ES.3431.5	chr10	+	6092	8	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-6	-43	intron_retention	FALSE	canonical	0	0	junction_7	397.692220241755	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCAGTCTGAGCGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	82465655	82486115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82483913_82484411
ES.3431.7	chr10	+	5351	12	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	-12	-46	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	455.806033851975	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465680	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82479120_82479180_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481474_82481513_82483228_82483786_82483913_82484411
ES.3431.8	chr10	+	5449	12	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-10	-41	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	459.065309817335	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTCTGAGCGTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	82465682	82486117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82479120_82479180_82480003_82480140_82480284_82480368_82480448_82481272_82481345_82481470_82481513_82483228_82483786_82483913_82484411
ES.3431.9	chr10	+	5922	8	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	-3	-46	intron_retention	FALSE	canonical	3	474	junction_7	247.817576092593	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGCGCAGTCTGAGCG	NA	False	NA	NA	False	ATTAAA	-16	NA	82465689	82486112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82465873_82474534_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786
ES.34310.1	chr8	+	2555	1	Intergenic	novelGene_27937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGCTTCTTGGTCAT	9134	False	NA	NA	False	NA	NA	NA	126918193	126920748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_126918200_126920700
ES.34311.1	chr8	+	2483	6	NIC	ENSMUSG00000057060.9	novel	2309	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-8	NA	127025286	127122710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127025601_127108853_127109074_127113567_127113694_127115821_127116015_127117782_127117873_127121170
ES.34311.2	chr8	+	3018	8	NNC	ENSMUSG00000057060.9	novel	2309	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.0572763655761	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-8	NA	127025292	127122710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127025601_127047737_127048063_127105361_127105578_127108853_127109074_127113567_127113694_127115821_127116015_127117782_127117873_127121170
ES.34311.3	chr8	+	2802	7	FSM	ENSMUSG00000057060.9	ENSMUST00000108759.3	2309	7	-4	-489	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	2.96741563579414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAAAAAAAAGC	NA	False	NA	NA	False	AATAAA	-8	NA	127025292	127122710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127025601_127047737_127048063_127108853_127109074_127113567_127113694_127115821_127116015_127117782_127117873_127121170
ES.34311.4	chr8	+	2017	2	NNC	ENSMUSG00000057060.9	novel	2309	7	NA	NA	22477	-17251	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATGTTTGTTTAAT	NA	False	NA	NA	False	TATAAA	-29	NA	127047773	127104970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127048063_127103242
ES.34312.1	chr8	-	160	1	Intergenic	novelGene_27938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	127117587	127117427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127117400_127117600
ES.34313.1	chr8	+	773	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	-25	-1	-25	1	multi-exon	FALSE	canonical	3	239	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCGTGCTTCTGGCAG	NA	False	NA	8	True	AATAAA	-19	NA	127149228	127152173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127149570_127151741
ES.34314.1	chr8	+	1935	9	Antisense	novelGene_ENSMUSG00000090290.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCAGCTGAGGCCGGA	NA	False	NA	NA	False	NA	NA	NA	127153170	127163670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_127153880_127154161_127154303_127154558_127154684_127154815_127155004_127155617_127155790_127157555_127157642_127160585_127160784_127161536_127161623_127163440
ES.34315.1	chr8	-	7742	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-28	-1331	-28	1331	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGGCAAATTATTGT	NA	False	NA	-2	True	ATTAAA	-21	NA	127201832	127150736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.11	chr8	-	5797	31	NNC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	691	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.0707901656922	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTTATGCTTTTTCT	NA	False	NA	-9	True	AATAAA	-31	NA	127201113	127152057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157272_127157368_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.12	chr8	-	6308	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-26	101	-26	-101	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGTTTTTATTTATTT	NA	False	NA	-120	True	ATTAAA	-33	NA	127201830	127152168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.13	chr8	-	5688	29	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	475	-109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	11.4626167009393	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACCTATCTTAGTTTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	127201329	127152176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.14	chr8	-	6227	29	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	-27	-113	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	10.8658329883453	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAATAACCTATCTTAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	127201831	127152180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127198040_127198139_127200993
ES.34315.16	chr8	-	4920	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-21	1484	-21	-1484	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTCCCCTTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	127201825	127153551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.17	chr8	-	3520	22	ISM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	38	11395	38	-11395	5prime_fragment	FALSE	canonical	3	24	junction_19	7.32188345470365	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGCGTGTTTTTCTTA	NA	False	NA	NA	False	CATAAA	-22	NA	127201766	127163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.18	chr8	-	3652	1	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	33540	-12545	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAACAGGCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	127168264	127164612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127164600_127168300
ES.34315.19	chr8	-	2970	17	ISM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-21	21696	-21	-21696	5prime_fragment	FALSE	canonical	3	24	junction_14	6.3118811577849	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGTGTGGTCAGTAG	NA	False	NA	NA	False	AATAAA	-20	NA	127201825	127173763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.2	chr8	-	7668	29	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	-26	1329	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	10.8658329883453	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTGGCAAATTATT	NA	False	NA	-4	True	ATTAAA	-19	NA	127201830	127150738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127198040_127198139_127200993
ES.34315.3	chr8	-	7656	30	NNC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	-4	1329	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	13.4407582878776	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGTGGCAAATTATT	NA	False	NA	-4	True	ATTAAA	-19	NA	127201808	127150738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127153880_127154161_127154294_127154552_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167555_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.4	chr8	-	6427	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	-26	-18	-26	18	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTTTCTTAGAATAG	NA	False	NA	-1	True	AATAAA	-39	NA	127201830	127152049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34315.6	chr8	-	4492	19	NNC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	24357	14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	21.0699159472621	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGCTTTTTCTTAGA	NA	False	NA	-5	True	AATAAA	-35	NA	127177447	127152053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157272_127157368_127157560_127157643_127157777_127158026_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174976_127175167_127177402
ES.34315.9	chr8	-	6534	29	NIC	ENSMUSG00000090290.3	novel	6383	30	NA	NA	-5	13	intron_retention	FALSE	canonical	3	24	junction_26	8.53825425448819	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATGCTTTTTCTTAG	NA	False	NA	-6	True	AATAAA	-34	NA	127201809	127152054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ES.34316.1	chr8	-	101	1	Intergenic	novelGene_27939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGTTTATTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	127230178	127230077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127230100_127230200
ES.34317.1	chr8	+	159	1	Intergenic	novelGene_27940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAAAAAAAATTT	NA	False	NA	-16	True	NA	NA	NA	127303150	127303309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_127303200_127303300
ES.34318.1	chr8	-	5101	3	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	-10	18260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCAGTGGCTGACACAG	NA	False	NA	NA	False	NA	NA	NA	127320735	127296774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127296797_127315045_127318568_127319178
ES.34318.10	chr8	-	2098	3	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	-73	-2362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGCCTTACTGTCTGT	NA	False	NA	-2	True	AATACA	-18	NA	127320798	127317396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127318568_127319178_127319750_127320442
ES.34318.11	chr8	-	2422	3	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	1	-2362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGCCTTACTGTCTGT	NA	False	NA	-2	True	AATACA	-18	NA	127320724	127317396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127318568_127319178_127320153_127320447
ES.34318.12	chr8	-	3328	1	NIC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	0	-2363	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTGCCTTACTGTCTG	NA	False	NA	-3	True	AATACA	-17	NA	127320725	127317397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127317400_127320700
ES.34318.13	chr8	-	2529	3	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	1	-2372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACATTGTAAGATTGCCT	NA	False	NA	-12	True	AATACA	-8	NA	127320724	127317406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127318568_127319178_127320234_127320411
ES.34318.14	chr8	-	2524	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-62	2618	-62	-2618	multi-exon	FALSE	canonical	3	202	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTACTTTAAGGCATT	NA	False	NA	NA	False	AATACA	-32	NA	127320787	127317652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34318.15	chr8	-	2127	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	1	2952	1	-2952	multi-exon	FALSE	canonical	3	202	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGAGGTCTATTGCCC	NA	False	NA	NA	False	ATTAAA	-13	NA	127320724	127317986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34318.2	chr8	-	3735	1	Antisense	novelGene_ENSMUSG00000097060.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	127302445	127298710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_127298700_127302400
ES.34318.3	chr8	-	7093	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	12	-2025	12	2025	multi-exon	FALSE	canonical	3	202	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCTTTTATTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	127320713	127313009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34318.4	chr8	-	4579	2	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	30	2025	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCTTTTATTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	127320695	127313009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127316004_127319110
ES.34318.5	chr8	-	5152	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-68	-4	-68	4	multi-exon	FALSE	canonical	3	202	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGACCTTTTTTTTAA	NA	False	NA	-1	True	AATAAA	-26	NA	127320793	127315030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34318.6	chr8	-	3634	2	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	-1993	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTTCCAAGACCTT	NA	False	NA	-9	True	AATAAA	-18	NA	127322718	127315038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127318568_127322613
ES.34318.7	chr8	-	5054	2	NNC	ENSMUSG00000051495.9	novel	5080	2	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTTCCAAGACCTT	NA	False	NA	-9	True	AATAAA	-18	NA	127320751	127315038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127318568_127319226
ES.34318.8	chr8	-	4436	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-53	697	-53	-697	multi-exon	FALSE	canonical	3	202	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGGTTTTTCTCTCT	NA	False	NA	NA	False	AATAAA	-45	NA	127320778	127315731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34318.9	chr8	-	2774	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	-54	2360	-54	-2360	multi-exon	FALSE	canonical	3	202	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCTTACTGTCTGTCA	NA	False	NA	0	True	AATACA	-20	NA	127320779	127317394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127318568_127319178
ES.34319.1	chr8	+	176	1	Intergenic	novelGene_27941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGTACAC	NA	False	NA	NA	False	NA	NA	NA	127538798	127538974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_127538800_127539000
ES.3432.1	chr10	-	4181	1	Antisense	novelGene_ENSMUSG00000034674.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTGTCTCGTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	82465917	82461736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_82461700_82465900
ES.34320.1	chr8	+	4200	2	Antisense	novelGene_ENSMUSG00000093904.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCCAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	127661067	127665786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_127665170_127665688
ES.34321.1	chr8	+	235	1	Intergenic	novelGene_27942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCGACTTAGAACACCAT	NA	False	NA	NA	False	ATTAAA	-5	NA	127669951	127670186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_127670000_127670200
ES.34322.1	chr8	-	1568	9	NNC	ENSMUSG00000110697.2	novel	1646	9	NA	NA	15743	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.20439901106855	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATGCCTATTG	NA	False	NA	NA	False	NA	NA	NA	127587445	127539388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127540019_127541230_127541511_127545762_127545885_127547870_127547989_127567961_127568004_127568295_127568390_127571596_127571739_127587113_127587176_127587367
ES.34322.10	chr8	-	4807	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTTTCTATTTCA	NA	False	NA	-3	True	NA	NA	NA	127672593	127657416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659957_127660054_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.11	chr8	-	4796	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTTTCTATTTCA	NA	False	NA	-3	True	NA	NA	NA	127672580	127657416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659953_127660048_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.13	chr8	-	4771	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTTGTCTTTCTATTT	NA	False	NA	-5	True	NA	NA	NA	127672525	127657418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661469_127661532_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.15	chr8	-	4815	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTTGTCTTTCTATT	NA	False	NA	-6	True	NA	NA	NA	127672600	127657419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659908_127660001_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.16	chr8	-	4956	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-37	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3422.38924729494	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTTGTCTTTCTATT	NA	False	NA	-6	True	NA	NA	NA	127672631	127657419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659879_127659973_127661810_127663678_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.2	chr8	-	1560	6	NNC	ENSMUSG00000110697.2	novel	1646	9	NA	NA	15783	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.16619037896906	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATGCCTATTG	NA	False	NA	NA	False	NA	NA	NA	127587405	127539388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127540019_127541230_127541511_127545762_127545885_127568295_127568390_127571596_127571739_127587113
ES.34322.21	chr8	-	4803	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	0	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGATAATTTGTCTTT	NA	False	NA	-11	True	NA	NA	NA	127672594	127657424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659893_127659987_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.22	chr8	-	4800	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	2	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGATAATTTGTCTTT	NA	False	NA	-11	True	NA	NA	NA	127672592	127657424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659919_127660014_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.23	chr8	-	2840	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	20	2042	20	-2042	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCTTGGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	127672570	127659458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.24	chr8	-	2765	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-1	-2043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2714.61337210292	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTTGGTGTGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	127672591	127659459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659879_127659973_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.26	chr8	-	2766	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	2	-2043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2714.61337210292	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTTGGTGTGTA	NA	False	NA	NA	False	ATTAAA	-11	NA	127672592	127659459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659893_127659987_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.27	chr8	-	1555	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	11	3336	11	983	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGATTGATTAATTTA	NA	False	NA	NA	False	NA	NA	NA	127672579	127660752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.28	chr8	-	1524	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-77	3455	-73	864	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGAAGTGATTCTGTT	NA	False	NA	-1	True	ATTAAA	-38	NA	127672667	127660871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.29	chr8	-	1475	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-112	841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2905.22645416842	1100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTCTTTGTCAGTTGC	NA	False	NA	-24	True	ATTAAA	-15	NA	127672706	127660894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672418
ES.34322.3	chr8	-	1808	10	Fusion	ENSMUSG00000110697.2_ENSMUSG00000093904.3	novel	1646	9	NA	NA	11	1	multi-exon	FALSE	canonical	0	0	junction_3	3293.18874326471	1152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATGCCTATTG	NA	False	NA	NA	False	NA	NA	NA	127672579	127539388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_127540019_127541230_127541511_127545762_127545885_127567961_127568004_127568295_127568390_127571596_127571739_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.30	chr8	-	1129	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-82	3855	-78	464	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCATTCCCTCCGTGTG	NA	False	NA	NA	False	AAGAAA	-25	NA	127672672	127661271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.31	chr8	-	7384	3	NIC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	2	441	intron_retention	FALSE	canonical	3	6718	junction_2	362	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGTGTTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	127672592	127661294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127663933_127666621_127666704_127667928
ES.34322.32	chr8	-	5406	4	ISM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-4	3878	0	441	intron_retention	FALSE	canonical	3	5050	junction_1	1001.55789758866	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGTGTTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	127672594	127661294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928
ES.34322.33	chr8	-	4957	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	244	441	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	2905.22645416842	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGGTGTGTTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-37	NA	127672346	127661294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127669943_127670143
ES.34322.36	chr8	-	891	3	FSM	ENSMUSG00000093904.3	ENSMUST00000212771.2	458	3	1	-434	1	434	multi-exon	FALSE	canonical	3	10	junction_2	2520	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127672593	127661301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127672353
ES.34322.37	chr8	-	2986	4	NIC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	11	434	intron_retention	FALSE	canonical	3	6718	junction_2	330.564500345831	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127672579	127661301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.39	chr8	-	1978	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	1046	434	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	2901.09410395458	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127671544	127661301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127670346
ES.34322.4	chr8	-	4940	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-124	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTCTATTTCATAGAC	NA	False	NA	2	True	NA	NA	NA	127672718	127657411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659879_127659973_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.40	chr8	-	1022	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-9	434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2913.20180385774	1091	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127672603	127661301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666696_127667928_127667976_127672353
ES.34322.41	chr8	-	1124	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	11	434	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	3228.15950039647	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127672579	127661301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127670346_127670465_127672353
ES.34322.42	chr8	-	6735	4	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	426	421	intron_retention	TRUE	non_canonical	0	0	junction_3	3350.60631329117	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCGTTTACTTAAGAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	127672164	127661314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127663933_127666621_127666704_127667928_127669936_127670136
ES.34322.43	chr8	-	4015	4	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	2388	418	intron_retention	FALSE	non_canonical	0	0	junction_3	3102.10552152351	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCTCGTTTACTTAAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	127670202	127661317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127669943_127670143
ES.34322.44	chr8	-	3493	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	1	418	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	2903.57344491232	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCTCGTTTACTTAAGA	NA	False	NA	NA	False	ATTAAA	-14	NA	127672593	127661317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127670465_127672353
ES.34322.47	chr8	-	3097	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	11	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2762.9463892736	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGGATTTCCGTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	127672579	127661535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127665175_127665538_127666704_127667928_127667976_127672353
ES.34322.48	chr8	-	4968	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	-4	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2905.22645416842	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGGATTTCCGTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	127672598	127661535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127669943_127670143
ES.34322.49	chr8	-	4949	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	11	200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2905.22645416842	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGGATTTCCGTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	127672579	127661535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127669936_127670136
ES.34322.5	chr8	-	5033	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-128	-3	-124	3	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCTATTTCATAG	NA	False	NA	0	True	NA	NA	NA	127672718	127657413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.50	chr8	-	5513	15	Fusion	ENSMUSG00000033931.10_ENSMUSG00000093904.3	novel	3424	11	NA	NA	2	199	multi-exon	FALSE	canonical	3	153	junction_12	2894.78528688103	1191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCATGGATTTCCGTTTG	NA	False	NA	NA	False	TATAAA	-18	NA	127697797	127661536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.51	chr8	-	861	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	30	197	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	3026.18505713051	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	127672560	127661538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663678_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.52	chr8	-	3764	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	1228	197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2905.22645416842	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	127671362	127661538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127670660_127670825
ES.34322.53	chr8	-	782	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	0	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3033.94442104663	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	127672594	127661538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661808_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34322.54	chr8	-	6184	4	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	2	197	intron_retention	FALSE	non_canonical	0	0	junction_3	3102.10552152351	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	127672592	127661538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127669943_127670143
ES.34322.55	chr8	-	988	5	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	29	197	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	2904.39993802506	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	127672561	127661538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127668213_127672353
ES.34322.56	chr8	-	5155	4	ISM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	-1	4126	-1	193	intron_retention	FALSE	canonical	3	5050	junction_1	1001.55789758866	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAATATCATGGATTTC	NA	False	NA	NA	False	TATAAA	-12	NA	127672591	127661542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928
ES.34322.57	chr8	-	3496	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	-72	0	-72	0	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTAGTGTAATTTCTT	NA	False	NA	0	True	ATTAAA	-29	NA	127697893	127673921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.58	chr8	-	3296	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	-23	-5	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	50.1686046137312	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGATGCTTAGTGTAAT	NA	False	NA	-5	True	ATTAAA	-24	NA	127697844	127673926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
ES.34322.61	chr8	-	3463	12	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	63.936564636526	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTAAAGATGCTTA	NA	False	NA	-12	True	ATTAAA	-17	NA	127697785	127673933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127683834_127683922_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.62	chr8	-	3332	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	13	-13	combination_of_known_splicesites	TRUE	canonical	2	5	junction_5	53.233239407139	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTTCTAAAGATGCTT	NA	False	NA	-13	True	ATTAAA	-16	NA	127697786	127673934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.63	chr8	-	186	1	ISM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	23268	446	23246	-446	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGAGAAAGCTCTAT	NA	False	NA	NA	False	NA	NA	NA	127674553	127674367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127674400_127674600
ES.34322.64	chr8	-	3810	8	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	3	intron_retention	FALSE	canonical	2	5	junction_3	59.6082448755443	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCAAATGGTCACTG	NA	False	NA	-8	True	AATAAA	-24	NA	127697797	127675772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127679978_127680115_127680200_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.65	chr8	-	3854	9	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	3	intron_retention	FALSE	canonical	3	153	junction_6	11.346117177255	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCAAATGGTCACTG	NA	False	NA	-8	True	AATAAA	-24	NA	127697797	127675772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.66	chr8	-	3403	1	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	18623	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCAAATGGTCACT	NA	False	NA	-9	True	AATAAA	-23	NA	127679176	127675773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127675800_127679200
ES.34322.67	chr8	-	1617	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	-46	1853	-46	1	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTTCAAATGGTCAC	NA	False	NA	-10	True	AATAAA	-22	NA	127697867	127675774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.68	chr8	-	1393	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	50.1686046137312	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTTCAAATGGTCAC	NA	False	NA	-10	True	AATAAA	-22	NA	127697789	127675774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
ES.34322.69	chr8	-	2760	11	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	52.242224301804	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGTGTTCAAATGGTCA	NA	False	NA	-11	True	AATAAA	-21	NA	127697797	127675775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127676294_127677449_127677569_127678051_127678092_127678699_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.70	chr8	-	3222	9	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	16	junction_7	52.8581533445882	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGTGTTCAAATGGTCA	NA	False	NA	-11	True	AATAAA	-21	NA	127697797	127675775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127678051_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127697487_127697660_127697739
ES.34322.71	chr8	-	1606	12	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	63.936564636526	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAGTGTTCAAATGGTC	NA	False	NA	-12	True	AATAAA	-20	NA	127697771	127675776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127683834_127683922_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.73	chr8	-	2435	8	ISM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	4182	1856	4160	-2	3prime_fragment	FALSE	canonical	3	161	junction_7	9.62776596885385	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATAAGTGTTCAAATGGT	NA	False	NA	-13	True	AATAAA	-19	NA	127693639	127675777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131
ES.34322.74	chr8	-	1493	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.6788604286682	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATAAGTGTTCAAATGGT	NA	False	NA	-13	True	AATAAA	-19	NA	127697786	127675777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.76	chr8	-	3353	10	NIC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	14	-3	intron_retention	FALSE	canonical	3	153	junction_7	11.1166652784718	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGATAAGTGTTCAAATGG	NA	False	NA	-14	True	AATAAA	-18	NA	127697785	127675778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_127676294_127677449_127677569_127678051_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.77	chr8	-	3213	11	NNC	ENSMUSG00000033931.10	novel	3424	11	NA	NA	2	-242	intron_retention	FALSE	canonical	2	6	junction_5	66.2875553931505	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACAAATGAAGAAACCAAG	NA	False	NA	NA	False	AAAAAG	-25	NA	127697797	127676017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127676294_127677449_127677569_127678051_127679978_127680115_127680200_127683834_127683922_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.78	chr8	-	1304	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	24	2096	2	-242	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACAAATGAAGAAACCAAG	NA	False	NA	NA	False	AAAAAG	-25	NA	127697797	127676017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ES.34322.8	chr8	-	4813	6	NNC	ENSMUSG00000093904.3	novel	4902	5	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2714.61337210292	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTTTCTATTTCAT	NA	False	NA	-2	True	NA	NA	NA	127672594	127657415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_127659899_127659992_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ES.34323.1	chr8	+	327	1	Intergenic	novelGene_27943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATACAATTAATATG	NA	False	NA	NA	False	NA	NA	NA	127707049	127707376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_127707000_127707400
ES.34324.1	chr8	-	215	1	Intergenic	novelGene_27944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGTAACCTG	NA	False	NA	NA	False	NA	NA	NA	127716256	127716041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127716000_127716300
ES.34325.1	chr8	-	176	1	Intergenic	novelGene_27945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCAGCAGG	NA	False	NA	NA	False	NA	NA	NA	127723695	127723519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127723500_127723700
ES.34326.1	chr8	-	212	1	Intergenic	novelGene_27946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTCTGTGTGTATTGG	NA	False	NA	NA	False	NA	NA	NA	127755325	127755113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127755100_127755300
ES.34327.1	chr8	-	137	1	Intergenic	novelGene_27947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGCAATCAA	NA	False	NA	NA	False	NA	NA	NA	127759521	127759384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127759400_127759500
ES.34328.1	chr8	-	175	1	Intergenic	novelGene_27948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127769705	127769530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127769500_127769700
ES.34329.1	chr8	+	5111	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	-424	-5	-247	5	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	127790395	128129063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.10	chr8	+	5773	24	NIC	ENSMUSG00000025812.19	novel	4005	25	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	38.7531082965806	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	127790624	128338766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.11	chr8	+	5951	24	FSM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	-420	-1481	-18	0	multi-exon	FALSE	canonical	3	7	junction_17	35.6545068165681	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	127790624	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.12	chr8	+	3797	21	NIC	ENSMUSG00000025812.19	novel	3394	21	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	38.224861020022	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	AATAAA	-16	NA	127790628	128159622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.13	chr8	+	4883	16	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	-10	5	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	30.4321467457614	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	127790632	128129063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
ES.34329.14	chr8	+	3895	21	NIC	ENSMUSG00000025812.19	novel	3394	21	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	38.4076489777753	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGCTGTTGACGAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	127790633	128159626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.15	chr8	+	3882	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	-172	-316	-9	0	multi-exon	FALSE	canonical	3	22	junction_20	36.1848034401183	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	AATAAA	-16	NA	127790633	128159622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.16	chr8	+	4491	24	NIC	ENSMUSG00000025812.19	novel	4050	24	NA	NA	-9	21	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	37.5067983755696	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGACTTGTGCTGTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	127790633	128337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.17	chr8	+	3814	20	NIC	ENSMUSG00000025812.19	novel	3394	21	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	38.109770015537	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	AATAAA	-16	NA	127790656	128159622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
ES.34329.18	chr8	+	5460	24	NIC	ENSMUSG00000025812.19	novel	4005	25	NA	NA	14	25	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	40.1987500863723	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTATTGATATGCCTA	NA	False	NA	NA	False	AAAAAG	-44	NA	127790656	128338476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.19	chr8	+	3704	20	NIC	ENSMUSG00000025812.19	novel	3083	20	NA	NA	-32	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	40.3758656416898	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	127790773	128159620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
ES.34329.2	chr8	+	6153	25	FSM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	-338	0	-175	0	multi-exon	FALSE	canonical	3	28	junction_17	33.9451917311814	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	127790467	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.23	chr8	+	1081	6	NNC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	7	-37458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.4998765430217	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACATCGTTTTTCTTT	NA	False	NA	NA	False	AATACA	-14	NA	127790812	128050814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128050738
ES.34329.25	chr8	+	5716	25	NIC	ENSMUSG00000025812.19	novel	4005	25	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	37.3886309220092	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCTGTGTCTCTAG	NA	False	NA	9	True	AATAAA	-17	NA	127790819	128338763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.27	chr8	+	4239	20	FSM	ENSMUSG00000025812.19	ENSMUST00000162602.8	3083	20	-275	-881	0	881	multi-exon	FALSE	canonical	3	22	junction_15	35.6917396186892	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGATTTTTGTTTTTTG	NA	False	NA	NA	False	TTTAAA	-25	NA	127790819	128154115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002
ES.34329.28	chr8	+	4543	15	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	38.3587389931272	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	127790826	128129058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.29	chr8	+	5757	24	NIC	ENSMUSG00000025812.19	novel	4050	24	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	37.5067983755696	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	127790826	128338766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.3	chr8	+	6044	25	NIC	ENSMUSG00000025812.19	novel	5815	25	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	35.7828132239798	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTCTAGTTTTCC	NA	False	NA	15	True	AATAAA	-23	NA	127790587	128338769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.30	chr8	+	4274	24	NNC	ENSMUSG00000025812.19	novel	4050	24	NA	NA	9	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.1657718082541	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGACTTGTGCTGTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	127790828	128337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050632_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.33	chr8	+	5673	24	NIC	ENSMUSG00000025812.19	novel	5815	25	NA	NA	12	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	37.2757060411948	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTGTGTCTCTA	NA	False	NA	8	True	AATAAA	-16	NA	127790831	128338762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.34	chr8	+	4166	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	16	500	-12	18	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAATGAACAGATAG	NA	False	NA	NA	False	NA	NA	NA	127790835	128128558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.35	chr8	+	3488	20	NIC	ENSMUSG00000025812.19	novel	3394	21	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	43.0232173357235	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	127790851	128159620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.36	chr8	+	5712	25	NNC	ENSMUSG00000025812.19	novel	2758	18	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.5323355691965	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTGTGTCTCTA	NA	False	NA	8	True	AATAAA	-16	NA	127799966	128338762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127800290_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136186_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.37	chr8	+	4469	17	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-20	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.6237307242458	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	127799969	128129063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127800037_127866468_127866588_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.38	chr8	+	4343	16	NIC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.3565726657983	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTTTGTATGTATTG	NA	False	NA	NA	False	AATAAA	-12	NA	127799970	128129057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127800037_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.39	chr8	+	4916	1	Intergenic	novelGene_27949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	127830273	127835189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_127830300_127835200
ES.34329.4	chr8	+	5883	24	NIC	ENSMUSG00000025812.19	novel	4005	25	NA	NA	-42	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	36.3913822657729	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTGTCTCTAGTT	NA	False	NA	11	True	AATAAA	-19	NA	127790600	128338765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.40	chr8	+	4470	16	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45090	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	36.4535625449999	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTATGTATTGTTTCT	8462	False	NA	NA	False	AATAAA	-17	NA	127853063	128129062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.41	chr8	+	5519	24	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45078	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.6703635370691	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTGTGTCTCTA	8474	False	NA	8	True	AATAAA	-16	NA	127853075	128338762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086288_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.42	chr8	+	3472	21	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45075	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	42.1436828006286	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	8477	False	NA	NA	False	AATAAA	-14	NA	127853078	128159620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.44	chr8	+	3401	20	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45055	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.8489646071772	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	8497	False	NA	NA	False	AATAAA	-14	NA	127853098	128159620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096725_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
ES.34329.45	chr8	+	5539	25	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45047	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	37.1953364759019	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCTGTGTCTCTAGT	8505	False	NA	10	True	AATAAA	-18	NA	127853106	128338764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.46	chr8	+	4427	16	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-45046	-4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	38.9010139827857	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCACTTTGTATGTA	8506	False	NA	NA	False	AATAAA	-9	NA	127853107	128129054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_127853252_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
ES.34329.47	chr8	+	3259	19	NNC	ENSMUSG00000025812.19	novel	3497	13	NA	NA	-293	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.5623931707778	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGTTGACGAGTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	128025772	128159628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_128026017_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.48	chr8	+	3257	19	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-22	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	42.2897486337549	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTAGTGGCTGTTGAC	NA	False	NA	NA	False	AATAAA	-14	NA	128026043	128159620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.49	chr8	+	4241	14	FSM	ENSMUSG00000025812.19	ENSMUST00000160717.8	4214	14	-22	-5	-22	5	multi-exon	FALSE	canonical	3	35	junction_1	34.055645380003	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTATTGTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	128026043	128129063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.50	chr8	+	4247	14	NIC	ENSMUSG00000025812.19	novel	4214	14	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	37.2228217836647	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTATGTATTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	128026043	128129060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
ES.34329.51	chr8	+	5320	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	40.1423345707918	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128026084	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136186_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.52	chr8	+	5005	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_13	38.6745266068567	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAGAAAGAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	128026086	128338451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.53	chr8	+	5395	24	NNC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1014818747321	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTGTCTCTAGTT	NA	False	NA	11	True	AATAAA	-19	NA	128026088	128338765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_128026285_128027211_128027293_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136186_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.54	chr8	+	3113	19	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	42.143347380044	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTAGTGGCTGTTGACG	NA	False	NA	NA	False	AATAAA	-15	NA	128026089	128159621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.55	chr8	+	5309	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	36.9285942648805	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128026089	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.56	chr8	+	5225	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	40.2288905683917	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTGTCTCTAGTT	NA	False	NA	11	True	AATAAA	-19	NA	128026090	128338765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.57	chr8	+	3299	18	ISM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	-2	5948	-2	443	5prime_fragment	FALSE	canonical	3	28	junction_15	37.5484922913877	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTTCATTATTTAAAT	NA	False	NA	NA	False	ATTAAA	-29	NA	128026090	128153677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002
ES.34329.58	chr8	+	4990	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	36.9285942648805	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAGAAAGAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	128026092	128338451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.59	chr8	+	3752	24	NNC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	0	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	40.2598365911245	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGACTTGTGCTGTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	128026092	128337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337009_128337102
ES.34329.6	chr8	+	5924	25	FSM	ENSMUSG00000025812.19	ENSMUST00000162665.8	4005	25	-438	-1481	-36	0	multi-exon	FALSE	canonical	3	8	junction_17	35.6621638512802	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	127790606	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.60	chr8	+	5216	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	38.5844838852901	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128026092	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.62	chr8	+	4106	14	NNC	ENSMUSG00000025812.19	novel	4214	14	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.4591985284203	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTGTATGTATTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	128026093	128129060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_128026203_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.63	chr8	+	3199	19	FSM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	2	3	2	0	multi-exon	FALSE	canonical	3	22	junction_18	40.1787671952903	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	AATAAA	-16	NA	128026094	128159622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ES.34329.64	chr8	+	3162	18	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	44.5800861713499	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTGGCTGTTGACGA	NA	False	NA	NA	False	AATAAA	-16	NA	128026095	128159622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128159275
ES.34329.66	chr8	+	2068	1	Intergenic	novelGene_27952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTAAACTTCCAAGTGCA	NA	False	NA	NA	False	AAAACA	-3	NA	128027282	128029350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_128027300_128029400
ES.34329.67	chr8	+	3817	12	ISM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	17729	-517	17729	-1	3prime_fragment	FALSE	canonical	3	39	junction_11	29.1811101585023	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTTTGTATGTATTG	NA	False	NA	NA	False	AATAAA	-12	NA	128050519	128129057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ES.34329.68	chr8	+	4583	19	NNC	ENSMUSG00000025812.19	novel	4005	25	NA	NA	-1328	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	40.9298179815156	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	128096642	128338766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128338678_128338716
ES.34329.70	chr8	+	3888	15	ISM	ENSMUSG00000025812.19	ENSMUST00000162665.8	4005	25	313621	-1480	6695	-1	3prime_fragment	FALSE	canonical	3	8	junction_7	34.8688504928665	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	128104665	128338766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.71	chr8	+	3809	13	ISM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	324184	2	-808	-2	3prime_fragment	FALSE	canonical	3	28	junction_5	32.7766007321619	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTGTCTCTAGTT	NA	False	NA	11	True	AATAAA	-19	NA	128114989	128338765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.73	chr8	+	3300	10	ISM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	341049	0	-71	0	3prime_fragment	FALSE	canonical	3	28	junction_2	15.6702123647242	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128131854	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.74	chr8	+	2638	1	NIC	ENSMUSG00000025812.19	novel	5659	25	NA	NA	-1084	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	128136045	128138683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128136000_128138700
ES.34329.75	chr8	+	8353	1	NIC	ENSMUSG00000025812.19	novel	5659	25	NA	NA	3472	-4211	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACAGTTATAATTTCTA	NA	False	NA	NA	False	NA	NA	NA	128140601	128148954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_128140600_128149000
ES.34329.76	chr8	+	2342	4	ISM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	410052	1	26631	-1	3prime_fragment	FALSE	canonical	3	52	junction_1	12.328828005938	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	False	NA	12	True	AATAAA	-20	NA	128200857	128338766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_128201097_128319541_128319663_128329539_128329668_128336912
ES.34329.77	chr8	+	1457	2	Intergenic	novelGene_27954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTCATTGTTATAT	NA	False	NA	NA	False	NA	NA	NA	128204500	128214422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_128205747_128214211
ES.34329.78	chr8	+	2206	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-22	-1438	-22	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128306182	128338767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
ES.34329.79	chr8	+	745	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	-21	22	-21	21	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGACTTGTGCTGTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	128306183	128337307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
ES.34329.80	chr8	+	3684	2	Genic_Genomic	ENSMUSG00000025812.19	novel	5659	25	NA	NA	28838	-2	multi-exon	TRUE	canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTGTCTCTAGTT	NA	False	NA	11	True	AATAAA	-19	NA	128335042	128338765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_128335519_128335557
ES.3433.1	chr10	-	178	1	Intergenic	novelGene_2648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	82504178	82504000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82504000_82504200
ES.34330.1	chr8	-	5512	2	Antisense	novelGene_ENSMUSG00000025812.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAACCCATTTTGAGGGT	NA	False	NA	NA	False	NA	NA	NA	127911647	127905766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_-_127910019_127910387
ES.34331.1	chr8	-	158	1	Intergenic	novelGene_27950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATACTTA	NA	False	NA	NA	False	NA	NA	NA	127935257	127935099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_127935100_127935300
ES.34332.1	chr8	-	7479	1	Intergenic	novelGene_27951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCATG	NA	False	NA	NA	False	AATATA	-17	NA	128014296	128006817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_128006800_128014300
ES.34333.1	chr8	-	3010	1	Intergenic	novelGene_27953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTTCCTATTATGCAG	NA	False	NA	NA	False	TTTAAA	-8	NA	128094308	128091298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_128091300_128094300
ES.34334.1	chr8	-	962	1	Intergenic	novelGene_27955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGCAGCTTAAA	NA	False	NA	NA	False	NA	NA	NA	128212620	128211658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_128211700_128212600
ES.34335.1	chr8	-	3143	1	Intergenic	novelGene_27956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128275812	128272669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_128272700_128275800
ES.34336.1	chr8	-	1714	1	Intergenic	novelGene_27957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128282830	128281116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_128281100_128282800
ES.34337.1	chr8	+	3984	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	-163	-6	-163	6	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTCTGTATTTTTATT	NA	False	NA	22	True	AATAAA	-28	NA	129411971	129459687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.10	chr8	+	3624	16	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.398778828049	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	13	True	AATAAA	-19	NA	129412235	129459678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412354_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.11	chr8	+	3058	15	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	143.500622198751	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAAGTCCATTGGAAA	NA	False	NA	13	True	AATAAA	-14	NA	129412235	129459092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412441_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.13	chr8	+	4722	15	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	487	junction_6	36.958677973529	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCATTGGAAAAATTCT	NA	False	NA	19	True	AATAAA	-20	NA	129412235	129459098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129452668_129458503
ES.34337.14	chr8	+	3484	15	FSM	ENSMUSG00000025809.16	ENSMUST00000124826.2	2906	15	-2	-576	-2	-7	multi-exon	FALSE	canonical	0	0	junction_3	149.436287700253	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGATTTGTTTTGGCT	NA	False	NA	9	True	AATAAA	-15	NA	129412235	129459674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.15	chr8	+	3132	16	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.124087298737	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAAGTCCATTGGAAA	NA	False	NA	13	True	AATAAA	-14	NA	129412236	129459092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431969_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.16	chr8	+	3554	14	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	156.629325358089	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATTTGTTTTGGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	129412237	129459676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412441_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.18	chr8	+	4853	15	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_11	150.971953064948	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCATTGGAAAAATTCT	NA	False	NA	19	True	AATAAA	-20	NA	129412254	129459098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129447228_129447582_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.19	chr8	+	3683	16	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	147.402336782321	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTTGGCTCTGTA	NA	False	NA	14	True	AATAAA	-20	NA	129412258	129459679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458509
ES.34337.2	chr8	+	3295	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	-16	536	-16	47	multi-exon	FALSE	canonical	3	487	junction_6	37.7685348169905	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGTGTGCCATTGTG	NA	False	NA	66	True	NA	NA	NA	129412118	129459145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.20	chr8	+	4846	15	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	21	-8	intron_retention	FALSE	canonical	3	487	junction_6	39.089966873919	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGATTTGTTTTGGC	NA	False	NA	8	True	AATAAA	-14	NA	129412258	129459673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129450910_129452500_129452668_129458503
ES.34337.21	chr8	+	3822	17	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.553523403235	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGATTTGTTTTGGCT	NA	False	NA	9	True	AATAAA	-15	NA	129412258	129459674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129430305_129430444_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.23	chr8	+	3627	16	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	147.365245412735	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGCTCTGTATTTTT	NA	False	NA	19	True	AATAAA	-25	NA	129412266	129459684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442741_129443728_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.25	chr8	+	2985	17	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	142.723385763336	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCATTGGAAAAATTCTGA	NA	False	NA	21	True	AATAAA	-22	NA	129412267	129459100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129448909_129449024_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.26	chr8	+	3051	15	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	151.229805533277	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCATTGGAAAAATTCTGA	NA	False	NA	21	True	AATAAA	-22	NA	129412276	129459100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443833_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.28	chr8	+	3433	14	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	21415	14	-17264	-14	3prime_fragment	FALSE	canonical	3	487	junction_4	38.2936335030238	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATTAAGTGATTTGT	NA	False	NA	2	True	AATAAA	-8	NA	129433549	129459667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.29	chr8	+	4730	13	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-13905	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	162.189939234494	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATTTGTTTTGGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	129436908	129459676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129447228_129447582_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.3	chr8	+	1178	1	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	11	-23818	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	129412145	129413323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412100_129413300
ES.34337.30	chr8	+	2958	11	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	28272	5	-10407	-5	3prime_fragment	FALSE	canonical	3	487	junction_1	36.8722117589927	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATTTGTTTTGGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	129440406	129459676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.31	chr8	+	1798	4	ISM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	37154	5	-1525	-5	3prime_fragment	FALSE	canonical	3	537	junction_3	32.3213036040731	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGATTTGTTTTGGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	129449288	129459676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.32	chr8	+	4797	1	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	4070	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTGGCTCTGTAT	NA	False	NA	15	True	AATAAA	-21	NA	129454883	129459680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129454900_129459700
ES.34337.4	chr8	+	3755	16	NNC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	144.684699336945	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTTTTGGCTCTGT	NA	False	NA	13	True	AATAAA	-19	NA	129412211	129459678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439668_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.7	chr8	+	4053	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	100	-338	-3	338	multi-exon	FALSE	canonical	3	487	junction_6	37.7685348169905	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGGTTGGCAAAGTGT	NA	False	NA	NA	False	CATAAA	-24	NA	129412234	129460019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34337.8	chr8	+	5470	13	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_1	162.189939234494	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGGCTCTGTATT	NA	False	NA	16	True	AATAAA	-22	NA	129412235	129459681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129412441_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ES.34338.1	chr8	+	6662	1	Antisense	novelGene_ENSMUSG00000025808.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	129461805	129468467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr8_+_129461800_129468500
ES.34339.1	chr8	-	7174	1	Intergenic	novelGene_27958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	129480220	129473046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_129473000_129480200
ES.34339.2	chr8	-	151	1	Intergenic	novelGene_27959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	129480355	129480204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_129480200_129480400
ES.3434.1	chr10	+	5506	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	-68	-1	-68	1	intron_retention	FALSE	canonical	3	69	junction_7	9.81666256450355	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGGTATTATTTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	82534772	82578263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ES.3434.2	chr10	+	2376	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	107	2954	-97	-1921	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATATGGATTCT	NA	False	NA	13	True	AATAAA	-22	NA	82534947	82575308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ES.3434.3	chr10	+	4294	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	112	1031	-92	2	intron_retention	FALSE	canonical	3	69	junction_7	9.81666256450355	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAATTGTATTTTTTCC	NA	False	NA	12	True	AATAAA	-20	NA	82534952	82577231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ES.3434.4	chr10	+	4103	13	NIC	ENSMUSG00000020246.14	novel	3422	15	NA	NA	-92	-3	intron_retention	FALSE	canonical	0	0	junction_12	25.2729543627614	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGCCCAAATTGTATTT	NA	False	NA	7	True	AATAAA	-15	NA	82534952	82577226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574813
ES.3434.5	chr10	+	3624	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	113	1700	-91	-667	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACCTTTTGGGTACATGA	NA	False	NA	NA	False	AATAAA	-23	NA	82534953	82576562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ES.3434.6	chr10	+	6988	13	NIC	ENSMUSG00000020246.14	novel	3422	15	NA	NA	-86	-4	intron_retention	FALSE	canonical	3	69	junction_7	10.119768881858	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTACAGGTGGTATTATT	NA	False	NA	NA	False	AATAAA	-19	NA	82534958	82578258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82570316_82574112_82574299_82574813
ES.3434.7	chr10	+	2008	14	NNC	ENSMUSG00000020246.14	novel	3422	15	NA	NA	3237	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.991307991113	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTGCCCAAATTGTAT	NA	False	NA	5	True	AATAAA	-13	NA	82538281	82577224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813_82575100_82576759_82576838_82577114
ES.3434.8	chr10	+	1491	10	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	10991	3093	10787	-2060	internal_fragment	FALSE	canonical	3	69	junction_3	10.1105005920687	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTTATGAACATCTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	82545831	82575169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ES.34340.1	chr8	-	168	1	Intergenic	novelGene_27960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAATTA	NA	False	NA	NA	False	NA	NA	NA	129582386	129582218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_129582200_129582400
ES.34341.1	chr8	-	143	1	Intergenic	novelGene_27961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129705911	129705768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_-_129705800_129705900
ES.34342.1	chr8	+	6257	1	Intergenic	novelGene_27962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAATAAAAGTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	129952177	129958434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr8_+_129952200_129958400
ES.34343.1	chr8	-	3887	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-47	-1503	-19	-260	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCTATCATCTTCCT	NA	False	NA	NA	False	AATAAA	-22	NA	129960546	129943094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ES.34343.10	chr8	-	3179	4	FSM	ENSMUSG00000071302.11	ENSMUST00000189965.2	343	4	-10	-2826	-10	274	multi-exon	FALSE	canonical	3	6	junction_3	25.9358182185692	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGCCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	129960897	129943749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960789
ES.34343.11	chr8	-	3060	3	NIC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	-3	273	intron_retention	FALSE	canonical	3	10	junction_2	29	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGCCATGATGT	NA	False	NA	NA	False	NA	NA	NA	129960502	129943750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_129946633_129948024_129948086_129960385
ES.34343.12	chr8	-	3546	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	-362	-847	-12	273	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGCCATGATGT	NA	False	NA	NA	False	NA	NA	NA	129960861	129943750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ES.34343.2	chr8	-	3952	5	NNC	ENSMUSG00000071302.11	novel	413	5	NA	NA	11	-261	intron_retention	FALSE	canonical	0	0	junction_4	29.5328207254234	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGCTATCATCTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	129960876	129943095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_129946633_129948024_129948086_129948304_129948432_129960573_129960714_129960789
ES.34343.3	chr8	-	3696	3	NIC	ENSMUSG00000071302.11	novel	343	4	NA	NA	0	-261	intron_retention	FALSE	canonical	1	1	junction_2	33.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTGCTATCATCTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	129960887	129943095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_129946633_129948024_129948086_129960789
ES.34343.4	chr8	-	3716	3	NIC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	4	-281	intron_retention	FALSE	canonical	3	10	junction_2	29	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGATGAGTCACCTGTC	NA	False	NA	NA	False	AATAAA	-44	NA	129960523	129943115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_-_129946633_129948024_129948086_129960385
ES.34343.5	chr8	-	3761	4	FSM	ENSMUSG00000071302.11	ENSMUST00000189965.2	343	4	12	-3430	12	-311	multi-exon	FALSE	canonical	3	6	junction_3	25.9358182185692	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGGCTGGTTATTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	129960875	129943145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960789
ES.34343.6	chr8	-	3997	4	NNC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	-9	-312	intron_retention	FALSE	canonical	1	2	junction_3	27.7408643620842	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAAGGCTGGTTATTTG	NA	False	NA	NA	False	AATAAA	-13	NA	129960896	129943146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_129946633_129948024_129948086_129948304_129948432_129960573
ES.34343.7	chr8	-	3665	3	NNC	ENSMUSG00000071302.11	novel	413	5	NA	NA	0	-314	intron_retention	FALSE	canonical	0	0	junction_2	34	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960849	129943148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_129946633_129948024_129948086_129960729
ES.34343.8	chr8	-	3769	4	NNC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	-15	-314	intron_retention	FALSE	non_canonical	0	0	junction_3	28.6472802664872	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960542	129943148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_129946633_129948024_129948086_129948304_129948372_129960385
ES.34343.9	chr8	-	3849	4	NNC	ENSMUSG00000071302.11	novel	2337	4	NA	NA	-19	-314	intron_retention	FALSE	non_canonical	0	0	junction_3	28.6472802664872	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960546	129943148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_-_129946633_129948024_129948086_129948304_129948448_129960385
ES.34344.1	chr8	+	4249	4	NIC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-47	2268	intron_retention	FALSE	canonical	3	9	junction_2	17.4610678049451	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	129990074	130011593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817
ES.34344.10	chr8	+	5018	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-21	4141	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15.1657508881031	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGATGGCTCAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	129990100	130013466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817_130007879_130008956
ES.34344.11	chr8	+	892	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-18	260	-18	-260	multi-exon	FALSE	canonical	3	25	junction_3	15.5777619273972	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	129990103	130009065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
ES.34344.12	chr8	+	5458	3	ISM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-18	-3721	-18	3721	intron_retention	FALSE	canonical	3	47	junction_2	8	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTGCTCAGCAATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	129990103	130013046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_129990206_130007503_130007631_130007817
ES.34344.13	chr8	+	3119	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-18	2267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1637678967368	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCGTGGTA	NA	False	NA	NA	False	NA	NA	NA	129990103	130011592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_129995262_129995456_130007503_130007631_130007817_130007879_130008956
ES.34344.14	chr8	+	3997	3	ISM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	-13	-2265	-13	2265	intron_retention	FALSE	canonical	3	47	junction_2	8	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	129990108	130011590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr8_+_129990206_130007503_130007631_130007817
ES.34344.15	chr8	+	4403	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-5	3725	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.6999472573253	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	129990116	130013050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463_130008496_130008956
ES.34344.16	chr8	+	855	5	NIC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-2	-496	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	15.1657508881031	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCTTAAGATGTGAG	NA	False	NA	NA	False	NA	NA	NA	129990119	130008829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817_130007879_130008463
ES.34344.2	chr8	+	2985	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-40	2272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.6999472573253	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCGTGGTATCTTT	NA	False	NA	NA	False	NA	NA	NA	129990081	130011597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463_130008496_130008956
ES.34344.3	chr8	+	631	5	NIC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-40	-758	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	15.1657508881031	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTGAGCAAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	129990081	130008567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817_130007879_130008463
ES.34344.4	chr8	+	2950	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-40	2269	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCGTGGTATC	NA	False	NA	NA	False	NA	NA	NA	129990081	130011594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
ES.34344.5	chr8	+	3813	3	FSM	ENSMUSG00000110605.2	ENSMUST00000212145.2	3767	3	-46	0	-39	0	multi-exon	FALSE	canonical	1	2	junction_2	4.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCTCGTGATTCTT	NA	False	NA	NA	False	NA	NA	NA	129990082	129998349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr8_+_129990206_129993965_129994181_129994874
ES.34344.6	chr8	+	4807	6	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-35	3723	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17.2092998114392	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTGCTCAGCAATTAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	129990086	130013048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_129993965_129994181_129995262_129995456_130007503_130007631_130007817_130007879_130008956
ES.34344.7	chr8	+	3955	1	Genic_Genomic	ENSMUSG00000110605.2	novel	NA	NA	NA	NA	-27	-4300	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCTCTCATGATTCTT	NA	False	NA	NA	False	NA	NA	NA	129990094	129994049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr8_+_129990100_129994000
ES.34344.8	chr8	+	4393	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-27	3725	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	129990094	130013050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
ES.34344.9	chr8	+	4605	5	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	-24	3725	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15.1657508881031	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	129990097	130013050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr8_+_129990206_129993965_129994181_130007503_130007631_130007817_130007879_130008956
ES.34345.1	chr9	-	3756	1	Antisense	novelGene_ENSMUSG00000110587.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTGACTTTGTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	3187291	3183535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_3183500_3187300
ES.34345.2	chr9	-	6370	1	Genic_Genomic	ENSMUSG00000042360.13	novel	NA	NA	NA	NA	9388	6246	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGAGAGATTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	3190394	3184024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_3184000_3190400
ES.34345.3	chr9	-	7155	5	NNC	ENSMUSG00000042360.13	novel	1128	4	NA	NA	35	5988	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.41588043316392	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTCAGAATGGTGAAT	NA	False	NA	NA	False	AATAAA	-27	NA	3199747	3184282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_3190806_3192311_3192413_3192819_3193049_3197276_3197368_3199536
ES.34345.4	chr9	-	4286	1	Antisense	novelGene_ENSMUSG00000110587.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCTGGAGAAATTACTC	NA	False	NA	NA	False	AATAAA	-19	NA	3188993	3184707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_3184700_3189000
ES.34346.1	chr9	-	175	1	Intergenic	novelGene_27963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3302348	3302173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3302200_3302300
ES.34347.1	chr9	-	182	1	Intergenic	novelGene_27964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCTTTTATC	NA	False	NA	NA	False	NA	NA	NA	3332706	3332524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3332500_3332700
ES.34348.1	chr9	+	3524	12	NIC	ENSMUSG00000025899.15	novel	2584	11	NA	NA	40	121	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.2407003439412	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTTGTCTATTTTT	31	False	NA	NA	False	TTTAAA	-38	NA	3335179	3387050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335251_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.10	chr9	+	3311	11	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATTAAAAATA	-6	True	NA	NA	False	NA	NA	NA	3335479	3386929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.11	chr9	+	3681	13	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	2	119	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.2568747516834	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTTTGTTGTCTATTT	-6	True	NA	NA	False	TTTAAA	-36	NA	3335479	3387048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3335675_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368058_3369657_3369915_3382693_3382844_3385041
ES.34348.12	chr9	+	3772	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	2	-447	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTGTAGCAAAATTATAG	-6	True	NA	NA	False	NA	NA	NA	3335479	3387390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.13	chr9	+	3225	11	ISM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	2	6645	2	-1333	5prime_fragment	FALSE	canonical	2	35	junction_1	11.536463929645	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATATAAAATTTTTAAC	-6	True	NA	NA	False	TATAAA	-14	NA	3335479	3384509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693
ES.34348.14	chr9	+	3554	12	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	2	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2407003439412	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTGTCTATTTT	-6	True	NA	NA	False	TTTAAA	-37	NA	3335479	3387049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335582_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.15	chr9	+	5496	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	2	122	intron_retention	FALSE	canonical	2	35	junction_1	12.5777581468241	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	-6	True	NA	NA	False	TTTAAA	-39	NA	3335479	3387051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.16	chr9	+	2705	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	2	4967	2	12	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTTCTCACTGCATC	-6	True	NA	NA	False	AATATA	-45	NA	3335479	3386187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.17	chr9	+	7672	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	2	0	2	0	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCATAGTATTTTCT	-6	True	NA	NA	False	NA	NA	NA	3335479	3391154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.18	chr9	+	3584	11	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	3	120	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	20.4227813972534	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTGTCTATTTT	-5	True	NA	NA	False	TTTAAA	-37	NA	3335480	3387049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335749_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.19	chr9	+	7374	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	3	-3774	3	-451	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGGACTATGGCAATGT	-5	True	NA	NA	False	AATAAA	-15	NA	3335480	3390703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.20	chr9	+	3661	13	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	3	121	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	23.6577154433813	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTTGTCTATTTTT	-5	True	NA	NA	False	TTTAAA	-38	NA	3335480	3387050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347315_3347410_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.21	chr9	+	7158	10	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	3	120	intron_retention	FALSE	canonical	2	19	junction_1	16.3624079848208	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTGTTGTCTATTTT	-5	True	NA	NA	False	TTTAAA	-37	NA	3335480	3387049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.22	chr9	+	6468	12	NNC	ENSMUSG00000025899.15	novel	2687	13	NA	NA	6	117	intron_retention	FALSE	non_canonical	0	0	junction_11	27.1561143290889	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATTTTGTTGTCTAT	-2	True	NA	NA	False	AATGAA	-45	NA	3335483	3387046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347261_3347410_3347803_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3383213_3384161
ES.34348.23	chr9	+	7300	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	10	364	-5	-364	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGCTGTGAGCCTCCCT	2	True	NA	NA	False	AATAAA	-17	NA	3335487	3390790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.24	chr9	+	3579	12	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	-5	122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.9867724853255	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	2	True	NA	NA	False	TTTAAA	-39	NA	3335487	3387051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335613_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.26	chr9	+	7810	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	14	-4221	-1	-4	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTTGTCATAGTATT	6	True	NA	NA	False	NA	NA	NA	3335491	3391150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.27	chr9	+	3580	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	23	0	8	0	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATTAAAAATA	15	True	NA	NA	False	NA	NA	NA	3335500	3386929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.28	chr9	+	3771	14	NNC	ENSMUSG00000025899.15	novel	2687	13	NA	NA	9	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.163891104904	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	16	False	NA	NA	False	TTTAAA	-39	NA	3335501	3387051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3336022_3336099_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347261_3347410_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.29	chr9	+	2529	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	9	12	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTTCTCACTGCATC	0	True	NA	NA	False	AATATA	-45	NA	3335519	3386187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.3	chr9	+	3661	13	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	-12	122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.7924235050217	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTGTCTATTTTTT	312	False	NA	NA	False	TTTAAA	-39	NA	3335460	3387051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3335675_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.30	chr9	+	3466	12	NNC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	10	123	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.2838432061411	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTGTCTATTTTTTT	1	True	NA	NA	False	TTTAAA	-40	NA	3335520	3387052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3335595_3335675_3335749_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.31	chr9	+	5250	2	ISM	ENSMUSG00000025899.15	ENSMUST00000211884.2	852	3	52	-27	14	27	intron_retention	FALSE	canonical	3	35	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAACAAACAACTTCC	5	True	NA	NA	False	NA	NA	NA	3335524	3343635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3335595_3338455
ES.34348.32	chr9	+	3910	11	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	15	-448	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	23.4923391768466	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTGTAGCAAAATTATA	6	True	NA	NA	False	NA	NA	NA	3335525	3387389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.33	chr9	+	5824	6	ISM	ENSMUSG00000025899.15	ENSMUST00000212294.2	2584	11	11541	-1214	8236	-448	3prime_fragment	FALSE	canonical	2	53	junction_4	9.63327566303384	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTGTAGCAAAATTATA	NA	False	NA	NA	False	NA	NA	NA	3346680	3387389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.34	chr9	+	141	1	Intergenic	novelGene_27966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	3354635	3354776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_3354600_3354800
ES.34348.35	chr9	+	176	1	Intergenic	novelGene_27968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAGAATA	4814	False	NA	NA	False	NA	NA	NA	3384092	3384268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_3384100_3384300
ES.34348.4	chr9	+	3725	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	-1	-121	-1	121	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTTGTCTATTTTT	-9	True	NA	NA	False	TTTAAA	-38	NA	3335476	3387050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.6	chr9	+	3571	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	-1	4104	-1	121	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTTGTCTATTTTT	-9	True	NA	NA	False	TTTAAA	-38	NA	3335476	3387050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.7	chr9	+	4079	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	-1	-475	-1	-433	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGTTATGAAGTAGCAA	-9	True	NA	NA	False	NA	NA	NA	3335476	3387404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.8	chr9	+	3912	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	0	3762	0	-445	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAGCAAAATTATAGTT	-8	True	NA	NA	False	NA	NA	NA	3335477	3387392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34348.9	chr9	+	7087	11	NIC	ENSMUSG00000025899.15	novel	7674	12	NA	NA	0	-451	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.3713706278105	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGGACTATGGCAATGT	-8	True	NA	NA	False	AATAAA	-15	NA	3335477	3390703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3335595_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ES.34349.1	chr9	-	206	1	Intergenic	novelGene_27965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTTCTTTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	3342316	3342110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3342100_3342300
ES.3435.1	chr10	+	2663	2	Intergenic	novelGene_2649	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTCTATGTCTTACA	9153	False	NA	NA	False	AATAAA	-15	NA	82578294	82581802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82578913_82579757
ES.34350.1	chr9	-	4204	3	Antisense	novelGene_ENSMUSG00000064956.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3368638	3346168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_3349490_3359482_3359590_3367862
ES.34350.2	chr9	-	3459	6	Antisense	novelGene_ENSMUSG00000064956.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGTTGGGTCATAAGCAA	NA	False	NA	NA	False	NA	NA	NA	3386615	3348271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_3349490_3359482_3359590_3367862_3368016_3369657_3369913_3382691_3382843_3385040
ES.34350.3	chr9	-	160	1	Intergenic	novelGene_27967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGATAATAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	3359355	3359195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3359200_3359400
ES.34351.1	chr9	+	13292	3	NNC	ENSMUSG00000025898.7	novel	2085	3	NA	NA	-234	3597	intron_retention	FALSE	non_canonical	0	0	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAGTATAAATGAG	NA	False	NA	NA	False	NA	NA	NA	3403357	3416796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3407863_3407937_3416226_3416297
ES.34351.11	chr9	+	5632	4	NNC	ENSMUSG00000025898.7	novel	2085	3	NA	NA	-22	3597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	141.238175512934	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAGTATAAATGAG	-13	True	NA	NA	False	NA	NA	NA	3404065	3416796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3416226_3416297
ES.34351.12	chr9	+	3706	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	475	265	-21	-265	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATAGTAAACAGGTGAGA	-12	True	NA	NA	False	TATAAA	-22	NA	3404066	3478971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.13	chr9	+	5845	17	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-21	-106	intron_retention	FALSE	canonical	3	200	junction_7	32.1159398702576	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTGAATCTGTAGCAT	-12	True	NA	15	True	TATAAA	-16	NA	3404066	3479130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.14	chr9	+	3846	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-21	-102	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	66.3146531167364	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATCTGTAGCATTTCT	-12	True	NA	19	True	TATAAA	-20	NA	3404066	3479134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411429_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.15	chr9	+	4014	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-19	68	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	66.3146531167364	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATATCCTGCTCACT	-10	True	NA	17	True	ATTAAA	-17	NA	3404068	3479304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411429_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.16	chr9	+	3426	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	483	537	-13	-537	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATCTTGAGAAAAGCTT	-4	True	NA	15	True	ATTAAA	-28	NA	3404074	3478699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.17	chr9	+	3856	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-10	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	87.2865067238652	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	-1	True	NA	18	True	ATTAAA	-18	NA	3404077	3479305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816_3477963_3478044
ES.34351.18	chr9	+	2759	13	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-9	-109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	78.3186156386562	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTACTGAATCTGTAG	0	True	NA	12	True	TATAAA	-13	NA	3404078	3479127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.19	chr9	+	1776	4	NNC	ENSMUSG00000025898.7	novel	2283	8	NA	NA	-9	585	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	139.366024872954	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGTCATGATGTCT	0	True	NA	NA	False	NA	NA	NA	3404078	3413784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3412354
ES.34351.2	chr9	+	4268	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	8	69	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	85.5725812785069	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	NA	False	NA	18	True	ATTAAA	-18	NA	3403599	3479305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3403781_3404023_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460136_3475482_3475585_3477816
ES.34351.20	chr9	+	3881	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-9	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.7443201340425	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTGAATCTGTAGCAT	0	True	NA	15	True	TATAAA	-16	NA	3404078	3479130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409937_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.21	chr9	+	5953	17	ISM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	487	238	-9	-238	intron_retention	FALSE	canonical	3	200	junction_7	32.6697490042394	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCTTTTCAGCTATTG	0	True	NA	NA	False	AGTAAA	-17	NA	3404078	3478998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482
ES.34351.23	chr9	+	3025	15	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-9	-106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	72.0966259223534	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTGAATCTGTAGCAT	0	True	NA	15	True	TATAAA	-16	NA	3404078	3479130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.24	chr9	+	4089	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-9	70	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	84.4440241217609	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCCTGCTCACTGC	0	True	NA	19	True	ATTAAA	-19	NA	3404078	3479306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3421702_3421763_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.25	chr9	+	3757	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-2	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	87.2105196664051	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTACTGAATCTGT	7	True	NA	10	True	TATAAA	-11	NA	3404085	3479125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411429_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454600_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.26	chr9	+	6052	17	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-2	-109	intron_retention	FALSE	canonical	2	4	junction_3	67.8907382766604	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTACTGAATCTGTAG	7	True	NA	12	True	TATAAA	-13	NA	3404085	3479127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411429_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482
ES.34351.27	chr9	+	3873	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-2	-103	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	65.9314417960129	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCTGTAGCATTTC	7	True	NA	18	True	TATAAA	-19	NA	3404085	3479133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430413_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.28	chr9	+	3287	16	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	-426	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	70.8386586233503	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATTACATGTTTATTT	9	True	NA	NA	False	GATAAA	-15	NA	3404087	3478810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.29	chr9	+	3966	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	-111	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	84.8850348165239	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTACTGAATCTGT	9	True	NA	10	True	TATAAA	-11	NA	3404087	3479125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3421635_3421763_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.3	chr9	+	3894	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	451	101	-45	-101	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCTGTAGCATTTCTG	-2	True	NA	20	True	TATAAA	-21	NA	3404042	3479135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.31	chr9	+	5994	17	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	64	intron_retention	FALSE	canonical	3	200	junction_7	32.1159398702576	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTACTTTATATCCTGCT	9	True	NA	13	True	ATTAAA	-13	NA	3404087	3479300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.33	chr9	+	3991	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	67	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	67.4824083189534	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATATCCTGCTCAC	9	True	NA	16	True	ATTAAA	-16	NA	3404087	3479303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458854_3460040_3460132_3475482_3475585_3477816
ES.34351.34	chr9	+	6319	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	68	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	66.9463969844842	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATATCCTGCTCACT	9	True	NA	17	True	ATTAAA	-17	NA	3404087	3479304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3413753_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.36	chr9	+	3756	17	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	-103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	69.1544636574531	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCTGTAGCATTTC	9	True	NA	18	True	TATAAA	-19	NA	3404087	3479133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.37	chr9	+	4017	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	73	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	67.642762011875	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATCCTGCTCACTGCCCC	9	True	NA	22	True	ATTAAA	-22	NA	3404087	3479309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428673_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.38	chr9	+	6934	2	ISM	ENSMUSG00000025898.7	ENSMUST00000212644.2	2085	3	0	-3597	0	3597	intron_retention	FALSE	canonical	3	318	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAGTATAAATGAG	9	True	NA	NA	False	NA	NA	NA	3404087	3416796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3404191_3409965
ES.34351.39	chr9	+	5837	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-540	intron_retention	FALSE	canonical	0	0	junction_8	87.0984806338189	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGATCTTGAGAAAAG	10	True	NA	12	True	ATTAAA	-25	NA	3404088	3478696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3439257_3439454_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482
ES.34351.4	chr9	+	4053	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-42	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.6874048482176	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATATCCTGCTCACT	1	True	NA	17	True	ATTAAA	-17	NA	3404045	3479304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460125_3475482_3475585_3477816
ES.34351.40	chr9	+	3704	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.6808099945804	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGTAGCATTTCTGT	10	True	NA	21	True	TATAAA	-22	NA	3404088	3479136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417921_3418738_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.41	chr9	+	3898	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-111	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	84.4440241217609	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTACTGAATCTGT	10	True	NA	10	True	TATAAA	-11	NA	3404088	3479125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3421702_3421763_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.42	chr9	+	3848	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.6202504424244	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTACTGAATCTGTA	10	True	NA	11	True	TATAAA	-12	NA	3404088	3479126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431097_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.43	chr9	+	3900	17	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	65	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	68.5546941773501	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACTTTATATCCTGCTC	10	True	NA	14	True	ATTAAA	-14	NA	3404088	3479301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.44	chr9	+	3932	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	1	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.5485488605781	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTATAAATACTCC	10	True	NA	-14	True	NA	NA	NA	3404088	3479101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3433113_3433293_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454600_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.45	chr9	+	3174	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	498	774	2	-774	multi-exon	FALSE	canonical	3	200	junction_7	32.0504576240346	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAATATTCATAAATA	11	True	NA	NA	False	ATTAAA	-13	NA	3404089	3478462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.46	chr9	+	4107	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	3	70	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	81.3321379693579	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCCTGCTCACTGC	12	True	NA	19	True	ATTAAA	-19	NA	3404090	3479306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3440578_3440669_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.47	chr9	+	3312	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	6	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.780686872608	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTCTCAACATTTGATC	15	True	NA	2	True	ATTAAA	-15	NA	3404093	3478686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816_3477963_3478044
ES.34351.49	chr9	+	3825	2	NNC	ENSMUSG00000025898.7	novel	2085	3	NA	NA	8167	3597	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAGTATAAATGAG	8176	False	NA	NA	False	NA	NA	NA	3412254	3416796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3412483_3413199
ES.34351.5	chr9	+	3804	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-41	-105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.780686872608	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGAATCTGTAGCATT	2	True	NA	16	True	TATAAA	-17	NA	3404046	3479131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816_3477963_3478044
ES.34351.50	chr9	+	5069	15	ISM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	12715	106	12219	-106	3prime_fragment	FALSE	canonical	3	200	junction_4	27.0343696589572	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTGAATCTGTAGCAT	NA	False	NA	15	True	TATAAA	-16	NA	3416306	3479130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.51	chr9	+	4328	14	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	13808	69	intron_retention	FALSE	canonical	3	200	junction_3	27.7207119284928	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	914	False	NA	18	True	ATTAAA	-18	NA	3417895	3479305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.52	chr9	+	3391	14	ISM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	15061	111	14565	-111	3prime_fragment	FALSE	canonical	3	200	junction_3	27.7207119284928	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTACTGAATCTGT	1671	False	NA	10	True	TATAAA	-11	NA	3418652	3479125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.53	chr9	+	6661	9	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-1352	69	intron_retention	FALSE	canonical	0	0	junction_5	86.5837744615006	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	NA	False	NA	18	True	ATTAAA	-18	NA	3439210	3479305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454747_3456732_3456850_3458733_3458890_3460050_3460132_3475482
ES.34351.54	chr9	+	8040	5	ISM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	47123	106	10152	-106	intron_retention	FALSE	canonical	3	238	junction_4	16.9263108798108	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTGAATCTGTAGCAT	NA	False	NA	15	True	TATAAA	-16	NA	3450714	3479130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482
ES.34351.55	chr9	+	5751	3	ISM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	53273	109	16302	-109	intron_retention	FALSE	canonical	3	238	junction_2	11	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTACTGAATCTGTAG	NA	False	NA	12	True	TATAAA	-13	NA	3456864	3479127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3458890_3460050_3460132_3475482
ES.34351.6	chr9	+	5723	3	FSM	ENSMUSG00000025898.7	ENSMUST00000212644.2	2085	3	-41	-3597	-41	3597	multi-exon	FALSE	canonical	3	277	junction_2	20.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGAGTATAAATGAG	2	True	NA	NA	False	NA	NA	NA	3404046	3416796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3404191_3409965_3410077_3411328
ES.34351.7	chr9	+	3597	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-39	-401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.6202504424244	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGTCAATGTTTCCA	4	True	NA	NA	False	GATAAA	-40	NA	3404048	3478835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431097_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.8	chr9	+	4072	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-29	69	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	65.9314417960129	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATCCTGCTCACTG	-20	True	NA	18	True	ATTAAA	-18	NA	3404058	3479305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430413_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34351.9	chr9	+	3959	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	-28	-109	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	81.3321379693579	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTACTGAATCTGTAG	-19	True	NA	12	True	TATAAA	-13	NA	3404059	3479127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3440578_3440669_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ES.34352.1	chr9	-	205	1	Intergenic	novelGene_27969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAGAAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	3433546	3433341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3433300_3433500
ES.34353.1	chr9	-	9379	9	Antisense	novelGene_ENSMUSG00000025898.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAACAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3473049	3440410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_3441145_3442959_3443046_3447234_3447354_3450013_3450152_3454538_3454751_3456730_3456846_3458728_3458888_3460048_3461287_3466471
ES.34354.1	chr9	+	4480	1	Intergenic	novelGene_27970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTGTGGTTTGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	3484535	3489015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_3484500_3489000
ES.34355.1	chr9	+	4144	5	FSM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	-576	-671	-466	671	multi-exon	FALSE	canonical	1	5	junction_4	5.59016994374947	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTTGCTTCTTAAATT	-13	True	NA	NA	False	AATACA	-20	NA	3532311	3761848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395
ES.34355.10	chr9	+	5442	7	NIC	ENSMUSG00000041624.11	novel	2243	8	NA	NA	-110	3575	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	6.9860973050449	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTACCAATAAAGCAAAAGT	263	False	NA	NA	False	TTTAAA	-24	NA	3532667	3898311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3797237_3797382_3865357_3865513_3894503
ES.34355.11	chr9	+	4527	1	Intergenic	novelGene_27971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAAATCTCATTATTTT	1178	False	NA	NA	False	AATAAA	-17	NA	3533931	3538458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_3533900_3538500
ES.34355.12	chr9	+	8328	1	Intergenic	novelGene_27973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCTACAGACTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	3897457	3905785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_3897500_3905800
ES.34355.2	chr9	+	2897	8	FSM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	-458	-196	-458	196	multi-exon	FALSE	canonical	0	0	junction_6	6.25642526870234	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTCTGGTAATGGATA	-5	True	NA	NA	False	AAAAAG	-43	NA	3532319	3894932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3759882_3797237_3797382_3865357_3865513_3894503
ES.34355.3	chr9	+	3404	2	NNC	ENSMUSG00000041624.11	novel	2897	5	NA	NA	-456	-42831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATAGATATTTTCATTAA	-3	True	NA	NA	False	AATAAA	-17	NA	3532321	3540060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3533100_3537434
ES.34355.4	chr9	+	3959	6	NNC	ENSMUSG00000041624.11	novel	2897	5	NA	NA	-455	537	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	6.79411510058521	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGCAAGTTTTATACTC	-2	True	NA	NA	False	ATTAAA	-13	NA	3532322	3761714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3761205_3761244
ES.34355.5	chr9	+	5006	8	FSM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	-455	-2308	-455	2308	multi-exon	FALSE	canonical	0	0	junction_6	6.25642526870234	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAGGAGAATTTACTCA	-2	True	NA	NA	False	AATAAA	-15	NA	3532322	3897044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3759882_3797237_3797382_3865357_3865513_3894503
ES.34355.6	chr9	+	3478	5	FSM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	-555	-26	-445	26	multi-exon	FALSE	canonical	1	5	junction_4	5.59016994374947	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGGAAGAAA	8	True	NA	NA	False	NA	NA	NA	3532332	3761203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395
ES.34355.7	chr9	+	3936	5	FSM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	-547	-492	-437	492	multi-exon	FALSE	canonical	1	5	junction_4	5.59016994374947	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCTTCATATTTATTT	16	True	NA	NA	False	AATAAA	-16	NA	3532340	3761669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395
ES.34355.8	chr9	+	3659	3	ISM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	-505	175719	-395	2567	5prime_fragment	FALSE	canonical	3	16	junction_2	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGTGGATCCTGTGT	-22	True	NA	NA	False	NA	NA	NA	3532382	3585458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_3533100_3579517_3579580_3582578
ES.34355.9	chr9	+	4030	6	NNC	ENSMUSG00000041624.11	novel	2897	5	NA	NA	-385	676	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	6.79411510058521	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTTCTTAAATTTAAAT	-12	True	NA	NA	False	AATACA	-25	NA	3532392	3761853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3761207_3761244
ES.34356.1	chr9	-	2293	1	Intergenic	novelGene_27972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGACTTTCAACCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	3688286	3685993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_3686000_3688300
ES.34357.1	chr9	+	7304	1	Intergenic	novelGene_27974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATGTCCCGTGTGCATG	-1	True	NA	NA	False	NA	NA	NA	4259591	4266895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_4259600_4266900
ES.34357.2	chr9	+	3795	1	Intergenic	novelGene_27975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGACTGTCTCCTTCA	4565	False	NA	NA	False	NA	NA	NA	4264157	4267952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_4264200_4268000
ES.34358.1	chr9	+	4298	2	Antisense	novelGene_ENSMUSG00000025894.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATCAGAA	NA	False	NA	NA	False	NA	NA	NA	4289804	4295996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_4292535_4294428
ES.34359.1	chr9	+	1921	1	Antisense	novelGene_ENSMUSG00000025894.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACCCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	4301659	4303580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_4301700_4303600
ES.34359.2	chr9	+	1431	2	Antisense	novelGene_ENSMUSG00000025894.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4301659	4303552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_4302628_4303089
ES.3436.1	chr10	-	2475	9	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	21	27300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.540307143419	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACCAAATCTGAAACCTG	NA	False	NA	NA	False	NA	NA	NA	82599957	82557234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82557260_82584617_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.10	chr10	-	4023	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	19	-75	intron_retention	FALSE	canonical	3	756	junction_4	67.4942384372342	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTACATCGTAACTT	NA	False	NA	-8	True	TATAAA	-16	NA	82599916	82584609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82592630_82597666_82597748_82599837
ES.3436.11	chr10	-	2675	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	173	-77	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	405.557127089801	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGTACATCGTAAC	NA	False	NA	-10	True	TATAAA	-14	NA	82599762	82584611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599292
ES.3436.13	chr10	-	2467	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	-20	-79	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	311.216244788745	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTGTGTACATCGTA	NA	False	NA	-12	True	TATAAA	-12	NA	82599955	82584613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592645_82597666_82597748_82599837
ES.3436.14	chr10	-	2774	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	156	-126	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGACCTTTTTCATC	NA	False	NA	45	True	NA	NA	NA	82599779	82584660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
ES.3436.15	chr10	-	2474	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-52	132	-52	-132	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAAATTTTGACCTTT	NA	False	NA	39	True	NA	NA	NA	82600030	82584666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.16	chr10	-	2356	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	9	-204	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	315.938446601259	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCTTCTGCATCGTT	NA	False	NA	-33	True	NA	NA	NA	82599969	82584738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588454_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.17	chr10	-	4251	7	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	185	208	142	-208	3prime_fragment	FALSE	canonical	3	756	junction_4	66.4540359112138	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCATGGTCTTCTGCAT	NA	False	NA	-37	True	NA	NA	NA	82599793	82584742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666
ES.3436.18	chr10	-	2259	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	33	262	-10	-262	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACTGTTTTGTAACTGG	NA	False	NA	-91	True	NA	NA	NA	82599945	82584796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.19	chr10	-	1495	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-8	1067	-8	-481	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTCAGGCAGCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	82599986	82585601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.2	chr10	-	3712	6	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	37	7	intron_retention	FALSE	canonical	3	756	junction_2	74.7058230662109	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGTGGGTTCACTTT	NA	False	NA	3	True	NA	NA	NA	82599898	82584527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.20	chr10	-	1335	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-51	1270	-51	503	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTCTTGGCTATATAC	NA	False	NA	NA	False	TATAAA	-5	NA	82600029	82585804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.21	chr10	-	1216	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	17	496	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	310.529698865585	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGAGTTTGTCTTGGC	NA	False	NA	NA	False	AATAAA	-45	NA	82599961	82585811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597710_82597748_82599837
ES.3436.22	chr10	-	3527	3	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	2296	496	intron_retention	FALSE	canonical	3	870	junction_2	49.5	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGAGTTTGTCTTGGC	NA	False	NA	NA	False	AATAAA	-45	NA	82590845	82585811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82587300_82588240
ES.3436.23	chr10	-	1580	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	172	469	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAATGAAAGTTGCCT	NA	False	NA	NA	False	AATAAA	-18	NA	82599763	82585838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
ES.3436.24	chr10	-	1415	6	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	-7	468	intron_retention	FALSE	canonical	3	46	junction_3	351.918172307143	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGAATGAAAGTTGCC	NA	False	NA	NA	False	AATAAA	-17	NA	82599985	82585839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
ES.3436.25	chr10	-	1524	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	15	468	intron_retention	FALSE	canonical	3	756	junction_3	68.4505092911822	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGAATGAAAGTTGCC	NA	False	NA	NA	False	AATAAA	-17	NA	82599963	82585839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.27	chr10	-	1131	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	1	1422	1	351	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGATTTGTAGACAGTT	NA	False	NA	52	True	NA	NA	NA	82599977	82585956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.28	chr10	-	1365	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	3	297	intron_retention	FALSE	canonical	3	756	junction_3	68.4505092911822	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGCTCTGTATGAC	NA	False	NA	-2	True	ATTAAA	-21	NA	82599975	82586010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.29	chr10	-	1387	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	188	292	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGAGTTTGTTGCTCTGT	NA	False	NA	-7	True	ATTAAA	-16	NA	82599747	82586015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
ES.3436.3	chr10	-	2632	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	-74	-4	-74	4	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGCGTGTGGGTTCAC	NA	False	NA	0	True	NA	NA	NA	82600052	82584530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.30	chr10	-	923	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	19	292	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGAGTTTGTTGCTCTGT	NA	False	NA	-7	True	ATTAAA	-16	NA	82599959	82586015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
ES.3436.31	chr10	-	2977	7	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	185	1482	142	291	3prime_fragment	FALSE	canonical	3	756	junction_4	66.4540359112138	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAGAGTTTGTTGCTCTG	NA	False	NA	-8	True	ATTAAA	-15	NA	82599793	82586016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666
ES.3436.32	chr10	-	10316	3	NIC	ENSMUSG00000020248.19	novel	3722	5	NA	NA	-50	291	intron_retention	FALSE	canonical	3	854	junction_1	33	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAGAGTTTGTTGCTCTG	NA	False	NA	-8	True	ATTAAA	-15	NA	82600028	82586016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82590930_82592535_82597748_82599837
ES.3436.4	chr10	-	2844	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	212	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599723	82584534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
ES.3436.5	chr10	-	2559	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	315.938446601259	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599968	82584534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588454_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.6	chr10	-	3254	5	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	46	junction_2	373.372133400445	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCGCCTTGCGTGTGG	NA	False	NA	-6	True	AATAAA	-41	NA	82599955	82584536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
ES.3436.7	chr10	-	2841	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	756	junction_3	68.4505092911822	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCGCCTTGCGTGTGG	NA	False	NA	-6	True	AATAAA	-41	NA	82599977	82584536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.3436.8	chr10	-	2448	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	-41	-16	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCAGGAAGGTTTTTG	NA	False	NA	-20	True	AATAAA	-27	NA	82600019	82584550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
ES.3436.9	chr10	-	3271	6	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	63	-33	intron_retention	FALSE	canonical	3	756	junction_2	62.0838143158102	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGGGTTGCCAGATACA	NA	False	NA	34	True	AATAAA	-10	NA	82599872	82584567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ES.34360.1	chr9	+	844	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-274	1661	-274	-1640	multi-exon	TRUE	canonical	3	30	junction_1	14.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTGCATTTGTTATC	NA	False	NA	NA	False	AATAAA	-17	NA	4309558	4330071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4309935_4316826_4317072_4329848
ES.34360.2	chr9	+	762	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	-89	1640	-87	-1640	multi-exon	FALSE	canonical	3	18	junction_1	18.4571575998762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTGCATTTGTTATC	12	True	NA	NA	False	AATAAA	-17	NA	4309745	4330071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
ES.34360.3	chr9	+	724	5	NNC	ENSMUSG00000025893.9	novel	2313	4	NA	NA	67	-1640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1078306780183	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTGCATTTGTTATC	-4	True	NA	NA	False	AATAAA	-17	NA	4309901	4330071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_4309935_4312141_4312260_4313701_4313807_4316826_4317072_4329848
ES.34360.4	chr9	+	702	4	NNC	ENSMUSG00000025893.9	novel	2231	3	NA	NA	102	-1641	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	24.3447461820136	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTTTGCATTTGTTAT	31	False	NA	NA	False	AATAAA	-16	NA	4309936	4330070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_4310067_4313701_4313807_4316826_4317072_4329848
ES.34361.1	chr9	-	6260	1	Intergenic	novelGene_27976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGGATGGAGTAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	4292717	4286457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_4286500_4292700
ES.34361.2	chr9	-	737	1	Intergenic	novelGene_27977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAATGAAATTGTCACT	NA	False	NA	NA	False	NA	NA	NA	4287554	4286817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_4286800_4287600
ES.34361.3	chr9	-	6441	1	Intergenic	novelGene_27978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATACTGCTATGTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	4293901	4287460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_4287500_4293900
ES.34361.4	chr9	-	4784	1	Intergenic	novelGene_27979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATATGAACACAGAATGG	NA	False	NA	NA	False	AATAAA	-18	NA	4292480	4287696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_4287700_4292500
ES.34361.5	chr9	-	3180	1	Intergenic	novelGene_27980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCTACTCTGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	4291178	4287998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_4288000_4291200
ES.34362.1	chr9	-	3062	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-191	-28	-187	28	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTTTAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	4309658	4294764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ES.34362.10	chr9	-	2583	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-28	2	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAGTAAAAGTTTT	14	False	4309513	-31	True	ATTAAA	-15	NA	4309499	4294962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
ES.34362.11	chr9	-	2541	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-25	294	-23	-123	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGAGAGAATCTAT	19	False	4309513	NA	False	AATATA	-25	NA	4309494	4295087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ES.34362.12	chr9	-	2396	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	2	412	0	-241	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATTGTTACTGGTAATT	1	True	NA	NA	False	TTTAAA	-33	NA	4309467	4295205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ES.34362.13	chr9	-	2002	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-333	1174	-329	-1002	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAAGTCTGTCGTC	NA	False	NA	33	True	AGTAAA	-12	NA	4309800	4295966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ES.34362.15	chr9	-	1943	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	26	-1002	intron_retention	FALSE	canonical	1	22	junction_4	346.891193315714	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAAGTCTGTCGTC	27	True	NA	33	True	AGTAAA	-12	NA	4309441	4295966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308727
ES.34362.18	chr9	-	1643	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-6	1173	-4	-1002	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAAGTCTGTCGTC	-7	True	NA	33	True	AGTAAA	-12	NA	4309475	4295966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ES.34362.19	chr9	-	1672	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-41	-1004	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	309.593669185919	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAACTAAGTCTGTCG	1	True	NA	31	True	AGTAAA	-10	NA	4309512	4295968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308733_4308920_4309253
ES.34362.2	chr9	-	3045	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-15	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	319.035170474981	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCCTTTTAGATT	-18	True	NA	NA	False	NA	NA	NA	4309486	4294767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309095
ES.34362.20	chr9	-	1217	4	NIC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	5	-1067	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	407.117782575128	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGACTCAGATGATTCTG	6	True	NA	-32	True	GATAAA	-19	NA	4309462	4296031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309287
ES.34362.21	chr9	-	1454	5	FSM	ENSMUSG00000025894.12	ENSMUST00000212897.2	2519	5	-4	1069	-4	-1069	multi-exon	FALSE	canonical	3	33	junction_3	415.72677325378	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCGACTCAGATGATTC	-7	True	NA	-34	True	CATAAA	-45	NA	4309475	4296033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309287
ES.34362.22	chr9	-	1428	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	6	-1075	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCCATCGACTCAGA	7	True	NA	-40	True	CATAAA	-39	NA	4309461	4296039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
ES.34362.23	chr9	-	1269	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-17	-1075	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCCATCGACTCAGA	-20	True	NA	-40	True	CATAAA	-39	NA	4309488	4296039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
ES.34362.24	chr9	-	1533	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-5	-1075	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	316.754415912391	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCCATCGACTCAGA	-8	True	NA	-40	True	CATAAA	-39	NA	4309476	4296039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308848_4309253
ES.34362.25	chr9	-	1448	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	6	-1095	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATAAATTATCCCCCC	7	True	NA	-60	True	CATAAA	-19	NA	4309461	4296059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
ES.34362.26	chr9	-	1217	7	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-329	-1616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	297.844898115333	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTTTAAAGACACAAAT	NA	False	NA	NA	False	AATAAA	-33	NA	4309800	4296580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253_4309513_4309683
ES.34362.27	chr9	-	746	4	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-41	-1622	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACATTTTTAAAGAC	1	True	NA	NA	False	AATAAA	-27	NA	4309512	4296586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
ES.34362.28	chr9	-	896	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-5	-1622	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACATTTTTAAAGAC	-8	True	NA	NA	False	AATAAA	-27	NA	4309476	4296586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
ES.34362.29	chr9	-	1349	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-332	1793	-330	-1622	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACATTTTTAAAGAC	NA	False	NA	NA	False	AATAAA	-27	NA	4309801	4296586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ES.34362.3	chr9	-	2730	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGGGCTTGACATGT	-3	True	NA	NA	False	AATAAA	-45	NA	4309516	4294792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
ES.34362.30	chr9	-	977	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	21	-1633	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	309.593669185919	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTATTTAACAAAACA	22	True	NA	NA	False	AATAAA	-16	NA	4309446	4296597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308733_4308920_4309253
ES.34362.31	chr9	-	912	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	1	-1636	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAATTTTATTTAACAAA	2	True	NA	NA	False	AATAAA	-13	NA	4309466	4296600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
ES.34362.32	chr9	-	841	5	NNC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	-17	-1655	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	414.469163509181	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTGCCTGATGTGA	-20	True	NA	NA	False	AATAAA	-29	NA	4309488	4296619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309287
ES.34362.33	chr9	-	1249	4	ISM	ENSMUSG00000025894.12	ENSMUST00000212897.2	2519	5	-17	1655	-17	-1655	intron_retention	FALSE	canonical	3	33	junction_3	393.928363481935	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTGCCTGATGTGA	-20	True	NA	NA	False	AATAAA	-29	NA	4309488	4296619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693
ES.34362.36	chr9	-	1303	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	5	-1657	intron_retention	FALSE	canonical	3	43	junction_4	338.106029966932	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAATTGCCTGATGT	6	True	NA	NA	False	AATAAA	-27	NA	4309462	4296621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308733
ES.34362.4	chr9	-	2804	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	3	3	1	-3	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTTTAGGGCTTGAC	2	True	NA	NA	False	AATAAA	-41	NA	4309466	4294796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ES.34362.6	chr9	-	2917	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-180	106	-176	66	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGCATATCTAATAGATG	NA	False	NA	33	True	TTTAAA	-37	NA	4309647	4294898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ES.34362.9	chr9	-	2543	5	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAGTAAAAGTTTT	14	False	4309513	-31	True	ATTAAA	-15	NA	4309499	4294962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
ES.34363.1	chr9	+	2842	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-23	-19	-23	19	multi-exon	FALSE	canonical	3	88	junction_1	13	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCAGAGTTATATGTT	-28	True	NA	33	True	AATAAA	-20	NA	4376538	4386889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4376624_4383536_4384143_4384738
ES.34363.2	chr9	+	3401	2	ISM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	-12	7	-12	2	intron_retention	FALSE	canonical	3	88	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTTCCTGTCTGA	-17	True	NA	7	True	ATTAAA	-15	NA	4376549	4386863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_4376624_4383536
ES.34363.3	chr9	+	2091	2	NNC	ENSMUSG00000041124.12	novel	2800	3	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTTCCTGTCTGA	-13	True	NA	7	True	ATTAAA	-15	NA	4376553	4386863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_4376628_4384846
ES.34363.4	chr9	+	2981	4	NNC	ENSMUSG00000041124.12	novel	2800	3	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	51.4090350900393	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	23	True	NA	14	True	AATAAA	-1	NA	4376589	4386870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_4376624_4381549_4381759_4383536_4384143_4384738
ES.34363.5	chr9	+	2614	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	29	157	22	-148	multi-exon	FALSE	canonical	3	88	junction_1	13	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGATTCTGTATTCTTT	24	True	NA	6	True	AATACA	-20	NA	4376590	4386713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4376624_4383536_4384143_4384738
ES.34363.6	chr9	+	2733	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	-2	0	2	multi-exon	FALSE	canonical	3	114	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTTCCTGTCTGA	13	False	NA	7	True	ATTAAA	-15	NA	4383534	4386863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4384143_4384738
ES.34363.7	chr9	+	3383	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	-652	0	643	multi-exon	FALSE	canonical	3	114	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAATGGTGTCAGCATTT	13	False	NA	NA	False	NA	NA	NA	4383534	4387513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_4384143_4384738
ES.34364.1	chr9	-	2969	11	FSM	ENSMUSG00000025892.17	ENSMUST00000163309.2	2338	11	51	-682	-41	682	multi-exon	FALSE	canonical	0	0	junction_1	0.6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTCTTCCATAAATAT	-6	True	NA	0	True	AATAAA	-17	NA	4796183	4477580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_4478853_4480177_4480289_4502373_4502479_4503561_4503730_4513222_4513382_4519485_4519540_4537634_4537820_4664767_4665008_4793809_4793969_4795186_4795364_4795844
ES.34365.1	chr9	+	2094	1	Intergenic	novelGene_27981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGACCGTTTCTCGTGA	NA	False	NA	NA	False	NA	NA	NA	5066061	5068155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_5066100_5068200
ES.34366.1	chr9	-	4787	3	Intergenic	novelGene_27982	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	2153	False	NA	NA	False	NA	NA	NA	5553484	5460293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_5460636_5548977_5550160_5550221
ES.34367.1	chr9	-	2485	1	Intergenic	novelGene_27983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTTCATTCCACAGAACA	NA	False	NA	NA	False	NA	NA	NA	5663363	5660878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_5660900_5663400
ES.34368.1	chr9	+	217	1	Intergenic	novelGene_27984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCTCAGTTACTACT	NA	False	NA	NA	False	NA	NA	NA	6057443	6057660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_6057400_6057700
ES.34369.1	chr9	-	176	1	Intergenic	novelGene_27985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTC	NA	False	NA	NA	False	NA	NA	NA	6278475	6278299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_6278300_6278500
ES.3437.1	chr10	-	629	4	Antisense	novelGene_ENSMUSG00000112286.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	9347	False	NA	NA	False	NA	NA	NA	82613877	82606950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_82607412_82607620_82607688_82612535_82612592_82613832
ES.34370.1	chr9	-	5023	1	Intergenic	novelGene_27986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	6785396	6780373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_6780400_6785400
ES.34371.1	chr9	+	176	1	Intergenic	novelGene_27987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	6837504	6837680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_6837500_6837700
ES.34372.1	chr9	-	3193	1	Intergenic	novelGene_27988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAATGTTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	6841583	6838390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_6838400_6841600
ES.34373.1	chr9	+	159	1	Intergenic	novelGene_27989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6860892	6861051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_6860900_6861100
ES.34374.1	chr9	+	2168	1	Intergenic	novelGene_27991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7028518	7030686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_7028500_7030700
ES.34375.10	chr9	-	10961	75	ISM	ENSMUSG00000047193.17	ENSMUST00000048417.13	13972	89	8541	63895	8452	30738	internal_fragment	FALSE	canonical	0	0	junction_63	4.624485441141	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTGTCAAATGATTTT	8526	False	NA	NA	False	TATAAA	-22	NA	7168505	6992397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458
ES.34375.11	chr9	-	984	10	ISM	ENSMUSG00000047193.17	ENSMUST00000147193.8	13103	90	153594	72060	-66674	21772	internal_fragment	FALSE	canonical	2	3	junction_7	4.87877742224448	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAAATTATATTCCA	NA	False	NA	NA	False	NA	NA	NA	7023363	7001363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310
ES.34375.12	chr9	-	9332	51	NIC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	37	4	intron_retention	FALSE	canonical	0	0	junction_34	3.91223721162201	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGATGAAAAGAAAAGAAATT	24	True	NA	NA	False	AAAAAG	-4	NA	7177007	7083179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241_7175413_7176762
ES.34375.14	chr9	-	3334	22	NNC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	16	-1474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.23376444344156	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTGAGTTTGA	3	True	NA	NA	False	TATAAA	-2	NA	7177028	7144187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7168573_7168666_7168813_7169476_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241_7175413_7176762
ES.34375.2	chr9	-	13402	89	NNC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	24	258	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_39	4.80718083738336	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATGTCATTTCTTTGTG	11	True	NA	NA	False	ATTAAA	-1	NA	7177020	6929045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101183_7101487_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7168573_7168677_7168813_7169476_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241_7175413_7176762
ES.34375.3	chr9	-	4618	36	NIC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	9147	255	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.5791007048662	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGATGTCATTTCTTT	NA	False	NA	NA	False	AATGAA	-19	NA	7102396	6929048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310
ES.34375.5	chr9	-	2888	21	NIC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	73747	255	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	4.56070170039655	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGATGTCATTTCTTT	NA	False	NA	NA	False	AATGAA	-19	NA	7037796	6929048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652
ES.34375.6	chr9	-	8278	57	NNC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	-13290	255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	4.34703159333693	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGATGTCATTTCTTT	NA	False	NA	NA	False	AATGAA	-19	NA	7130878	6929048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006784_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693
ES.34375.7	chr9	-	8573	60	NIC	ENSMUSG00000047193.17	novel	13972	89	NA	NA	-17550	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_43	4.3834453923384	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGTGTACCTTAAAGAA	NA	False	NA	-2	True	AATAAA	-13	NA	7135138	6929300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111572_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018
ES.34375.8	chr9	-	7553	55	ISM	ENSMUSG00000047193.17	ENSMUST00000048417.13	13972	89	48057	806	-11401	-5	3prime_fragment	FALSE	canonical	1	3	junction_17	4.25494951040278	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACCAGCACTGTGTACC	NA	False	NA	-10	True	AATAAA	-5	NA	7128989	6929308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955
ES.34375.9	chr9	-	2171	2	Intergenic	novelGene_27990	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAACAAAACAAA	NA	False	NA	NA	False	AATAGA	-6	NA	6965528	6963288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_6964067_6964135
ES.34376.1	chr9	-	3997	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-44	-31019	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGAACCTTTTTA	-11	True	NA	NA	False	AATAAA	-31	NA	7184490	7180493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_7180500_7184500
ES.34376.2	chr9	-	1277	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-9	-33704	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGCTGAAACAGGTCTA	24	True	NA	NA	False	CATAAA	-13	NA	7184455	7183178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_7183200_7184500
ES.34376.3	chr9	-	1089	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-21	-33904	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGGTGCTGAGTTCTTT	12	True	NA	NA	False	AGTAAA	-13	NA	7184467	7183378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_7183400_7184500
ES.34377.1	chr9	+	1271	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	-4	1154	-4	11	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCAGAGTGGTATTT	-25	True	NA	35	True	AATAAA	-43	NA	7184515	7207051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.10	chr9	+	5646	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	30	-3255	-1	3255	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTTTAATATACTTGC	9	True	NA	NA	False	AATAAA	-16	NA	7184549	7211460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.11	chr9	+	1538	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	30	853	-1	312	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGAAGTTGTCTTTATT	9	True	NA	NA	False	NA	NA	NA	7184549	7207352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.12	chr9	+	1225	8	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	349.924831578301	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	9	True	NA	15	True	AATAAA	-23	NA	7184549	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206711
ES.34377.14	chr9	+	1105	7	FSM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	5	12	5	-12	multi-exon	FALSE	canonical	3	18	junction_6	367.438165621857	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTTAAAGTGAAGATGTC	15	True	NA	12	True	AATAAA	-20	NA	7184555	7207028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7206719
ES.34377.15	chr9	+	1472	9	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	426.029928526154	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	16	True	NA	15	True	AATAAA	-23	NA	7184556	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072_7206335_7206719
ES.34377.16	chr9	+	961	5	NIC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	416.282581307458	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	19	True	NA	24	True	AATAAA	-32	NA	7184559	7207040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_7184883_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.18	chr9	+	1084	9	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	239	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	426.248735335367	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTTAAAGTGAAGATGT	249	False	NA	11	True	AATAAA	-19	NA	7184789	7207027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072_7206184_7206719
ES.34377.19	chr9	+	1111	9	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	255	-9	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	424.067193231214	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	265	False	NA	15	True	AATAAA	-23	NA	7184805	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072_7206223_7206719
ES.34377.2	chr9	+	1246	8	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	449.513342291371	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	-16	True	NA	24	True	AATAAA	-32	NA	7184524	7207040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7184883_7186776_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205405_7206719
ES.34377.20	chr9	+	9101	4	ISM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	10273	1172	-8470	-7	3prime_fragment	FALSE	canonical	3	895	junction_3	45.7456737480897	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGAAGATGTCCGTTG	NA	False	NA	17	True	AATAAA	-25	NA	7194792	7207033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.21	chr9	+	11561	2	Intergenic	novelGene_27992	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTTTTCTCTTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	7209278	7220877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_7211760_7211797
ES.34377.3	chr9	+	4298	6	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	-21	9	10	-9	intron_retention	FALSE	canonical	3	944	junction_1	54.0814200996978	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	-11	True	NA	15	True	AATAAA	-23	NA	7184529	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450
ES.34377.4	chr9	+	4013	1	NIC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	10	-17097	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAATTAATATTGTATT	-11	True	NA	NA	False	AAAAAG	-8	NA	7184529	7188542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_7184500_7188500
ES.34377.5	chr9	+	1883	8	NIC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	11	-9	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	341.602525919065	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	-10	True	NA	15	True	AATAAA	-23	NA	7184530	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072
ES.34377.6	chr9	+	1473	8	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	347.761999308816	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGTGAAGATGTCCGT	-10	True	NA	15	True	AATAAA	-23	NA	7184530	7207031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7185120_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.7	chr9	+	3112	7	NIC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	-14	-12	intron_retention	FALSE	canonical	3	895	junction_6	60.1220979895634	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTTAAAGTGAAGATGTC	-4	True	NA	12	True	AATAAA	-20	NA	7184536	7207028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34377.8	chr9	+	5514	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	29	-3122	-2	3122	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTCAGTAGTTCATTTT	8	True	NA	NA	False	NA	NA	NA	7184548	7211327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ES.34378.1	chr9	+	4634	1	Intergenic	novelGene_27993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7231919	7236553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_7231900_7236600
ES.34379.1	chr9	+	1937	12	NNC	ENSMUSG00000049723.15	novel	3607	10	NA	NA	-24237	209	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.19315237851179	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAAGTGTTTGCCTTTT	NA	False	NA	NA	False	AATAAA	-4	NA	7320143	7358673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7320213_7322379_7322546_7347490_7347539_7348584_7348833_7349722_7349872_7350011_7350138_7352887_7353050_7353445_7353570_7354721_7354856_7355311_7355472_7357804_7357909_7358226
ES.3438.1	chr10	-	4281	2	Intergenic	novelGene_2650	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	82638229	82633822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82634448_82634573
ES.34380.1	chr9	-	4320	1	Intergenic	novelGene_27994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	7379559	7375239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7375200_7379600
ES.34381.1	chr9	-	177	1	Intergenic	novelGene_27995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7700132	7699955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7700000_7700100
ES.34382.1	chr9	+	139	1	Intergenic	novelGene_27996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGTAAGCCA	1541	False	NA	NA	False	AATAAA	-18	NA	7724616	7724755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_7724600_7724800
ES.34383.1	chr9	+	675	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-53	-142	-53	142	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCAGTCTCAGTGAAG	-3	True	NA	NA	False	AATAAA	-39	NA	7751672	7752347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7751700_7752300
ES.34384.1	chr9	-	207	1	Intergenic	novelGene_27997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTAAAACATTTTTG	NA	False	NA	NA	False	NA	NA	NA	7753629	7753422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7753400_7753600
ES.34385.1	chr9	+	2980	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	-73	0	-73	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	False	NA	16	True	AATAAA	-19	NA	7763968	7794334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ES.34385.2	chr9	+	2683	5	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.629756065937	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTAGTGTTTTGTT	-40	True	NA	13	True	AATAAA	-16	NA	7764077	7794331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7764129_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ES.34385.3	chr9	+	1727	4	NNC	ENSMUSG00000050912.16	novel	508	4	NA	NA	37	-20081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	116.673333142868	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGGTATTTTATTTAT	-39	True	NA	NA	False	AATAAA	-15	NA	7764078	7770968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7764314_7768290_7768342_7769300_7770055_7770281
ES.34385.4	chr9	+	2696	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	58	153	-50	-148	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGGCAACATATTTTA	-18	True	NA	NA	False	AATAAA	-27	NA	7764099	7794181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ES.34385.5	chr9	+	1927	3	NNC	ENSMUSG00000050912.16	novel	508	4	NA	NA	-44	-20081	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	123.5	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGGTATTTTATTTAT	-12	True	NA	NA	False	AATAAA	-15	NA	7764105	7770968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7764314_7768290_7768342_7769300
ES.34385.6	chr9	+	1977	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	117	813	-7	-808	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTGTAATCTGCTTC	41	True	NA	NA	False	ATTAAA	-11	NA	7764158	7793521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ES.34385.8	chr9	+	2487	6	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	105.997358457652	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	8	False	NA	16	True	AATAAA	-19	NA	7764213	7794334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171_7793330_7793577
ES.34385.9	chr9	+	2719	4	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	14780	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.002153298135	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGTTTAGTGTTTTG	NA	False	NA	11	True	AATAAA	-14	NA	7778945	7794329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_7779086_7790842_7791110_7791311_7791466_7792171
ES.34386.1	chr9	-	5962	1	Intergenic	novelGene_27998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTCT	NA	False	NA	NA	False	NA	NA	NA	7805039	7799077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7799100_7805000
ES.34386.2	chr9	-	856	2	Intergenic	novelGene_27999	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	7800620	7799080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7799290_7799973
ES.34386.3	chr9	-	2266	1	Intergenic	novelGene_28000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCATACTATTTAGTGC	NA	False	NA	NA	False	NA	NA	NA	7804463	7802197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7802200_7804500
ES.34387.1	chr9	-	3372	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	-33	-8	-26	8	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCATGAGATTCCTTTA	-53	True	NA	7	True	AATAAA	-29	NA	7837091	7818219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.10	chr9	-	10727	3	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	177	junction_2	6.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-22	True	NA	-2	True	AATAAA	-20	NA	7837060	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7827011_7833505_7835381_7836990
ES.34387.11	chr9	-	3557	8	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	68	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	57.0273833257286	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	48	True	NA	-2	True	AATAAA	-20	NA	7836990	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836695
ES.34387.12	chr9	-	3221	8	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.3780364969134	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-16	True	NA	-2	True	AATAAA	-20	NA	7837054	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7821079_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.13	chr9	-	4941	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	-1803	-8	-1	-1	multi-exon	FALSE	canonical	3	127	junction_2	23.4781222039204	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-21	True	NA	-2	True	AATAAA	-20	NA	7837059	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ES.34387.14	chr9	-	5081	5	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	176	junction_1	5.93190525885234	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGATGTGATTCATGA	-39	True	NA	-3	True	AATAAA	-19	NA	7837077	7818229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.15	chr9	-	4760	7	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_4	67.3102270584988	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGATGTGATTCATGA	-21	True	NA	-3	True	AATAAA	-19	NA	7837059	7818229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7821221_7825615_7825683_7826931_7827011_7833505_7835381_7836990
ES.34387.16	chr9	-	3401	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	5	-2	intron_retention	FALSE	canonical	3	127	junction_1	22.1315511330669	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGATGTGATTCATGA	-15	True	NA	-3	True	AATAAA	-19	NA	7837053	7818229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.17	chr9	-	3399	8	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	71	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.240153716824	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGATGTGATTCATG	51	True	NA	-4	True	AATAAA	-18	NA	7836987	7818230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836848
ES.34387.18	chr9	-	3462	8	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	61	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.240153716824	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGATGTGATTCATG	41	True	NA	-4	True	AATAAA	-18	NA	7836997	7818230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836795
ES.34387.19	chr9	-	4546	7	NNC	ENSMUSG00000057367.13	novel	3130	7	NA	NA	64	4	intron_retention	FALSE	canonical	0	0	junction_3	67.2270200308048	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTCTGATGTGATTCA	44	True	NA	-6	True	AATAAA	-16	NA	7836994	7818232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819342_7821079_7821221_7825615_7825665_7826931_7827011_7833505
ES.34387.2	chr9	-	3110	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-26	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTGATTCATGAGAT	-53	True	NA	0	True	AATAAA	-22	NA	7837091	7818226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.20	chr9	-	3384	9	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	75.0640351633191	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	-15	True	NA	-10	True	AATAAA	-12	NA	7837053	7818236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7824516_7824584_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.21	chr9	-	3483	9	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.0640351633191	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	-21	True	NA	-10	True	AATAAA	-12	NA	7837059	7818236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826046_7826207_7826931_7827011_7833505_7835381_7836990
ES.34387.22	chr9	-	4522	6	NIC	ENSMUSG00000057367.13	novel	3130	7	NA	NA	78	-77	intron_retention	FALSE	canonical	3	27	junction_2	62.474314722132	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCGTGCATCATTGTA	58	True	NA	-87	True	ATTAAA	-11	NA	7836980	7818313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ES.34387.23	chr9	-	2956	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	1	-110	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTGTGAGAAATATATT	-19	True	NA	-120	True	NA	NA	NA	7837057	7818346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.3	chr9	-	3291	8	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	60.9305392413763	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTGATTCATGAGAT	-24	True	NA	0	True	AATAAA	-22	NA	7837062	7818226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835336_7836990
ES.34387.4	chr9	-	3277	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	65.7184651880023	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-16	True	NA	-2	True	AATAAA	-20	NA	7837054	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7826931_7827011_7833505_7835381_7836990
ES.34387.5	chr9	-	7721	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	127	junction_2	23.5472338550035	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-16	True	NA	-2	True	AATAAA	-20	NA	7837054	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.6	chr9	-	4592	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	5	-1	intron_retention	FALSE	canonical	3	127	junction_2	23.5472338550035	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-15	True	NA	-2	True	AATAAA	-20	NA	7837053	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7827011_7833505_7835381_7836990
ES.34387.7	chr9	-	4824	6	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	127	junction_1	21.7568380055559	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-25	True	NA	-2	True	AATAAA	-20	NA	7837063	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7819064_7819307_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ES.34387.8	chr9	-	3507	8	NNC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.240153716824	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	44	True	NA	-2	True	AATAAA	-20	NA	7836994	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836749
ES.34387.9	chr9	-	10604	5	NIC	ENSMUSG00000057367.13	novel	3130	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	127	junction_2	27.5952894530933	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATGTGATTCATGAG	-22	True	NA	-2	True	AATAAA	-20	NA	7837060	7818228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7827011_7833505
ES.34388.1	chr9	-	173	1	Intergenic	novelGene_28001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAACAACAA	2857	False	NA	NA	False	NA	NA	NA	7847786	7847613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7847600_7847800
ES.34389.1	chr9	-	2726	9	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	7.964766161037	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCTGGGCAGGTTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	7873251	7848699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872990
ES.34389.2	chr9	-	2613	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	50	4	9	-4	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGATGCTGGGCAGGT	-1	True	NA	NA	False	AATAAA	-30	NA	7872975	7848703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
ES.34389.3	chr9	-	2586	9	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	8.85649479195918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATTGATGCTGGG	-12	True	NA	NA	False	AATAAA	-25	NA	7873186	7848708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7873056
ES.34389.4	chr9	-	2435	9	NIC	ENSMUSG00000032000.18	novel	2667	9	NA	NA	4	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.30053761886914	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAATTGA	3	True	NA	NA	False	AATAAA	-18	NA	7872894	7848715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7849458_7849672_7849715_7850920_7851088_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
ES.34389.5	chr9	-	2234	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	154	279	-13	-279	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTCATGAGAGAGGGTT	-26	True	NA	NA	False	NA	NA	NA	7872871	7848978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
ES.34389.6	chr9	-	5289	4	NNC	ENSMUSG00000032000.18	novel	2909	5	NA	NA	6	4	intron_retention	TRUE	non_canonical	0	0	junction_1	5.65685424949238	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAGAAAGAAAGACC	-7	True	NA	NA	False	NA	NA	NA	7872852	7855811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7857747_7857872_7859316_7859526_7861409_7872823
ES.34389.7	chr9	-	176	1	Intergenic	novelGene_28002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATATAAAAAAAAAAAA	8606	False	NA	NA	False	NA	NA	NA	7859525	7859349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7859300_7859500
ES.3439.1	chr10	+	3849	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-3758	17	multi-exon	FALSE	canonical	1	2	junction_1	306.209659474608	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTGCTCTGGGCTTCTT	NA	False	NA	32	True	AATAAA	-33	NA	82644198	82733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82644397_82654864_82654958_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.10	chr10	+	3594	17	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-92	4	intron_retention	FALSE	canonical	0	0	junction_1	323.150893546653	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCTGACTGAGTGGTG	NA	False	NA	19	True	AATAAA	-20	NA	82647864	82733550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82648123_82648238_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.11	chr10	+	3730	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-71	12	multi-exon	FALSE	canonical	1	3	junction_3	300.166724042193	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTGGTGCTCTGGGC	NA	False	NA	27	True	AATAAA	-28	NA	82647885	82733558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.12	chr10	+	3454	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-71	1	multi-exon	FALSE	canonical	1	19	junction_2	295.750540527354	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82647885	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.13	chr10	+	5067	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-69	14	intron_retention	FALSE	canonical	1	19	junction_2	268.513557594854	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGGTGCTCTGGGCTT	NA	False	NA	29	True	AATAAA	-30	NA	82647887	82733560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82708771_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.14	chr10	+	3498	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	3531	14	NA	NA	-64	18	multi-exon	TRUE	canonical	0	0	junction_2	262.713329188554	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTCTGGGCTTCTTT	NA	False	NA	33	True	AATAAA	-34	NA	82647892	82733564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.16	chr10	+	3792	17	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	3531	14	NA	NA	-41	-1	multi-exon	FALSE	canonical	0	0	junction_2	321.224123471448	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82647915	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82696357_82696465_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.17	chr10	+	4107	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	1048	5	NA	NA	-31	-1	multi-exon	FALSE	canonical	0	0	junction_3	302.016217371775	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82647925	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82659350_82660121_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.18	chr10	+	3549	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	1048	5	NA	NA	-17	1	intron_retention	FALSE	canonical	1	5	junction_1	271.604491862708	924	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82647939	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82648194_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.19	chr10	+	3318	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	583	1	multi-exon	FALSE	canonical	0	0	junction_1	272.397977531525	924	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82648539	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82648563_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.2	chr10	+	3553	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-3745	-1	multi-exon	FALSE	canonical	1	2	junction_1	301.908919304408	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82644211	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82644397_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.20	chr10	+	3356	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	1022	-3	multi-exon	FALSE	canonical	1	1	junction_1	272.238978150613	924	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACGCGTGCCTTCTGAC	NA	False	NA	10	True	AATAAA	-11	NA	82648978	82733541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82649044_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.21	chr10	+	3449	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	1022	13	multi-exon	FALSE	canonical	1	1	junction_1	302.033772946007	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTGGTGCTCTGGGCT	NA	False	NA	28	True	AATAAA	-29	NA	82648978	82733559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82649044_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.22	chr10	+	1838	1	Intergenic	novelGene_2651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	82666003	82667841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82666000_82667800
ES.3439.23	chr10	+	3568	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-148	-1123	-120	16	multi-exon	FALSE	canonical	1	267	junction_3	142.059218034492	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGCTCTGGGCTTCT	NA	False	NA	31	True	AATAAA	-32	NA	82694892	82733562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.24	chr10	+	3451	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	-112	-14	-112	14	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGGTGCTCTGGGCTT	NA	False	NA	29	True	AATAAA	-30	NA	82694900	82733560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.25	chr10	+	5158	13	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-14	1	intron_retention	FALSE	canonical	1	113	junction_1	216.778048294153	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82694998	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.28	chr10	+	5410	14	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-13	0	intron_retention	FALSE	canonical	1	267	junction_3	147.406012578791	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82694999	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.3	chr10	+	3463	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-3734	0	multi-exon	FALSE	non_canonical	0	0	junction_11	309.454498649953	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTGCCTTCTGACTGA	NA	False	NA	13	True	AATAAA	-14	NA	82644222	82733544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82644397_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721024_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.30	chr10	+	4816	3	NNC	ENSMUSG00000020250.12	novel	483	2	NA	NA	-1	4314	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	280	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTAATAGTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	82695011	82701097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82698637_82698683
ES.3439.31	chr10	+	3503	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695016	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.32	chr10	+	3388	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	225.037593231324	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695017	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696426_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.33	chr10	+	3107	12	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	220.751533787246	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82695033	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.34	chr10	+	2373	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTAGCATTGTCTC	NA	False	NA	NA	False	AATACA	-16	NA	82695039	82732439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.36	chr10	+	4744	3	NNC	ENSMUSG00000020250.12	novel	483	2	NA	NA	-1	4288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	280	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	82695039	82701071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82698670_82698734
ES.3439.37	chr10	+	2298	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	-1	0	-1	0	multi-exon	FALSE	canonical	1	267	junction_3	142.059218034492	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTAGCATTGTCTC	NA	False	NA	NA	False	AATACA	-16	NA	82695039	82732439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.39	chr10	+	7045	14	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	22	junction_2	228.529930193143	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695039	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82708771_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.40	chr10	+	5976	2	NNC	ENSMUSG00000020250.12	novel	483	2	NA	NA	1	4281	intron_retention	FALSE	non_canonical	0	0	junction_1	0	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82695041	82701064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82698637_82698683
ES.3439.43	chr10	+	5282	14	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	267	junction_3	146.09751951043	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82723103_82726217_82726353_82731810
ES.3439.45	chr10	+	5781	13	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	12	intron_retention	FALSE	canonical	1	267	junction_3	153.176096916806	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTGGTGCTCTGGGC	NA	False	NA	27	True	AATAAA	-28	NA	82695041	82733558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715700_82717556_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.46	chr10	+	5991	2	NNC	ENSMUSG00000020250.12	novel	483	2	NA	NA	1	4314	intron_retention	FALSE	non_canonical	0	0	junction_1	0	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTAATAGTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	82695041	82701097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82698670_82698734
ES.3439.48	chr10	+	3208	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	218.675406329412	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82695041	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810_82731875_82732068
ES.3439.5	chr10	+	3411	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-2464	1	multi-exon	FALSE	canonical	1	13	junction_1	270.342828456682	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82645492	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82645609_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.50	chr10	+	4733	3	NNC	ENSMUSG00000020250.12	novel	483	2	NA	NA	1	4314	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	280	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGTAATAGTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	82695041	82701097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82698633_82698732
ES.3439.52	chr10	+	3397	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	225.875179997218	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719753_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.53	chr10	+	5658	13	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	-1	intron_retention	FALSE	canonical	1	267	junction_3	152.414456882104	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82695041	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.54	chr10	+	3396	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	224.142766093034	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695041	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721132_82723017_82723103_82726217_82726353_82731810
ES.3439.57	chr10	+	3444	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.257102698358	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82695045	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696312_82696465_82710446_82710571_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.59	chr10	+	3615	15	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	279.010432472643	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695060	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.6	chr10	+	3453	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-2417	13	multi-exon	FALSE	canonical	1	13	junction_1	300.54577022477	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTGGTGCTCTGGGCT	NA	False	NA	28	True	AATAAA	-29	NA	82645539	82733559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82645609_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.61	chr10	+	7603	12	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-16	-1	intron_retention	FALSE	canonical	1	267	junction_3	159.130644388411	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82695061	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.62	chr10	+	2431	1	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-16	709	mono-exon	FALSE	NA	NA	NA	NA	NA	739	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTATAAGCTTTGGGAT	NA	False	NA	NA	False	AGTAAA	-7	NA	82695061	82697492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695100_82697500
ES.3439.63	chr10	+	3245	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	224.819666962348	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82695061	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715645_82717636_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.65	chr10	+	2164	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	51	1110	-14	-3	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTGGTGTAGCATTGT	NA	False	NA	NA	False	AATACA	-13	NA	82695063	82732436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.68	chr10	+	3776	14	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-10	0	intron_retention	FALSE	canonical	1	267	junction_3	147.193428268533	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTGCCTTCTGACTGA	NA	False	NA	13	True	AATAAA	-14	NA	82695067	82733544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.69	chr10	+	3466	17	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	299.287252276137	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	NA	False	NA	12	True	AATAAA	-13	NA	82695075	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695135_82696357_82696465_82697203_82697262_82709985_82710028_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.7	chr10	+	3583	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-2123	1	multi-exon	FALSE	canonical	1	1	junction_1	272.238978150613	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82645833	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82646122_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.70	chr10	+	4222	14	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	3	0	intron_retention	FALSE	canonical	1	267	junction_3	147.406012578791	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTAGCATTGTCTC	NA	False	NA	NA	False	AATACA	-16	NA	82695080	82732439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.71	chr10	+	3165	13	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	214.297042028634	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTGCCTTCTGACTGAG	NA	False	NA	14	True	AATAAA	-15	NA	82695082	82733545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.72	chr10	+	3694	16	NIC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	266.539169520896	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695088	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82695135_82696357_82696465_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.74	chr10	+	3491	15	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.346003799871	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695109	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82695291_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.76	chr10	+	3620	14	FSM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	-74	-15	-74	13	multi-exon	FALSE	canonical	1	267	junction_2	143.143532881919	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTGGTGCTCTGGGCT	NA	False	NA	28	True	AATAAA	-29	NA	82696060	82733559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.78	chr10	+	3005	11	NNC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-9581	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	229.726794257875	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCCTTCTGACTGAGTG	5137	False	NA	16	True	AATAAA	-17	NA	82713098	82733547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726221_82726353_82731810
ES.3439.8	chr10	+	3767	16	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-99	16	intron_retention	FALSE	canonical	0	0	junction_1	302.158780923026	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGCTCTGGGCTTCT	NA	False	NA	31	True	AATAAA	-32	NA	82647857	82733562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82648238_82654864_82654958_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.80	chr10	+	7018	6	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-5672	-1	intron_retention	FALSE	canonical	3	702	junction_2	74	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGCCTTCTGACTG	9046	False	NA	12	True	AATAAA	-13	NA	82717007	82733543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82719841_82720318_82720396_82720775_82720933_82721019_82723103_82726217_82726353_82731810
ES.3439.81	chr10	+	2802	6	NIC	ENSMUSG00000020250.12	novel	3325	14	NA	NA	-2854	0	intron_retention	FALSE	canonical	3	702	junction_1	67.8781260790249	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82719825	82733546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.3439.82	chr10	+	6239	3	NNC	ENSMUSG00000020250.12	novel	894	3	NA	NA	-1293	-1282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	388	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTCCAAGTGTCAGC	NA	False	NA	NA	False	AAGAAA	-37	NA	82721386	82730864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82723103_82726217_82726715_82726838
ES.3439.9	chr10	+	3422	15	Fusion	ENSMUSG00000056821.14_ENSMUSG00000020250.12	novel	894	3	NA	NA	-96	17	multi-exon	FALSE	canonical	1	47	junction_2	264.185193238627	924	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTGCTCTGGGCTTCTT	NA	False	NA	32	True	AATAAA	-33	NA	82647860	82733563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_82647970_82654864_82654958_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ES.34390.1	chr9	-	208	1	Intergenic	novelGene_28003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGGCAACCTGAGACC	NA	False	NA	NA	False	AAAACA	-11	NA	7915868	7915660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_7915700_7915900
ES.34391.1	chr9	+	5919	1	Intergenic	novelGene_28004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7978199	7984118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_7978200_7984100
ES.34392.1	chr9	+	1544	3	FSM	ENSMUSG00000110161.2	ENSMUST00000211167.2	545	3	-150	-849	-150	849	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTGCTTCTTGATCAT	NA	False	NA	NA	False	NA	NA	NA	8004680	8010119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_8004885_8005927_8006106_8008957
ES.34393.1	chr9	-	4368	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	-189	-8	-189	8	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTACATTTGTGTTCT	NA	False	NA	2	True	AATAAA	-30	NA	8004786	7931991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.10	chr9	-	4118	7	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.6287553314247	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	NA	False	NA	-6	True	AATAAA	-22	NA	8004705	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7952953_7953136_7973796_7973913_8001457_8001709_8004115
ES.34393.11	chr9	-	5315	3	NNC	ENSMUSG00000053110.14	novel	4115	8	NA	NA	24947	0	intron_retention	FALSE	canonical	0	0	junction_1	119	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	NA	False	NA	-6	True	AATAAA	-22	NA	7940875	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408
ES.34393.12	chr9	-	4288	8	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-153	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	76.2022014787242	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	NA	False	NA	-6	True	AATAAA	-22	NA	8004750	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.18	chr9	-	4102	9	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.6787967930098	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTCAACTTTTTTA	-14	True	NA	-10	True	AATAAA	-18	NA	8004618	7932003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7932432_7932470_7934731_7936511_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.21	chr9	-	4183	9	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.627772457863	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	8	True	NA	-12	True	AATAAA	-16	NA	8004596	7932005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7950492_7950541_7952941_7953136_7962283_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.22	chr9	-	4158	8	NNC	ENSMUSG00000053110.14	novel	4115	8	NA	NA	-197	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.345651944413	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	666	False	NA	-12	True	AATAAA	-16	NA	8003973	7932005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8003451
ES.34393.23	chr9	-	3746	8	NIC	ENSMUSG00000053110.14	novel	4115	8	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	2	19	junction_7	72.7264935023191	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	880	False	NA	-12	True	AATAAA	-16	NA	8003759	7932005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8003648
ES.34393.25	chr9	-	3559	7	NNC	ENSMUSG00000053110.14	novel	1193	8	NA	NA	79	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.5066063706924	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGTGTCAACTTTTT	3014	False	NA	-12	True	AATAAA	-16	NA	8001625	7932005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7952953_7953136_7962283_7962404_7973796_7973913_8001457
ES.34393.26	chr9	-	3191	6	ISM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	42195	130	3420	-130	3prime_fragment	FALSE	canonical	3	70	junction_4	72.7202860280403	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTAGTCTTTCTTGTTGT	3413	False	NA	NA	False	ACTAAA	-17	NA	7962402	7932129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289
ES.34393.27	chr9	-	3914	9	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-40	-298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1145052889215	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGATGTGCCGTCTTC	2	True	NA	NA	False	AGTAAA	-38	NA	8004637	7932297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.28	chr9	-	2430	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	-29	1714	-21	784	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGGTTATCTCCTCT	-14	True	NA	NA	False	TTTAAA	-5	NA	8004618	7933713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.29	chr9	-	6308	6	ISM	ENSMUSG00000053110.14	ENSMUST00000173264.8	1480	10	-126	10800	72	-10800	5prime_fragment	FALSE	canonical	3	70	junction_1	57.6867402441844	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCCTGTATCCTAAAGCA	122	False	NA	NA	False	NA	NA	NA	8004517	7945297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.4	chr9	-	4212	9	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.0383675985021	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	8	False	NA	-6	True	AATAAA	-22	NA	8004631	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962283_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.5	chr9	-	4295	8	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.3378345790245	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	NA	False	NA	-6	True	AATAAA	-22	NA	8004768	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.6	chr9	-	4114	8	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.444773455151	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	-1	True	NA	-6	True	AATAAA	-22	NA	8004605	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938533_7952953_7953125_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34393.7	chr9	-	3799	9	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.6350238467085	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	882	False	NA	-6	True	AATAAA	-22	NA	8003757	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8003648
ES.34393.9	chr9	-	6599	8	NNC	ENSMUSG00000053110.14	novel	4171	9	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	83.3527052313706	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	-7	True	NA	-6	True	AATAAA	-22	NA	8004611	7931999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_7934731_7936511_7936629_7938408_7938540_7950492_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ES.34394.1	chr9	+	155	1	Intergenic	novelGene_28005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8013166	8013321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_8013200_8013300
ES.34395.1	chr9	+	136	1	Intergenic	novelGene_28006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8017048	8017184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_8017000_8017200
ES.34396.1	chr9	-	2270	7	NNC	ENSMUSG00000053070.6	novel	1592	7	NA	NA	-45	680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.8151743807532	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAAAGCAAAACA	-36	True	NA	NA	False	NA	NA	NA	8042869	8020992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8022546_8023900_8023968_8025962_8026136_8027101_8027222_8037460_8037537_8042409_8042492_8042670
ES.34396.2	chr9	-	5289	2	NIC	ENSMUSG00000053070.6	novel	533	4	NA	NA	-41	-15083	intron_retention	FALSE	canonical	2	10	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAGTGATTTGTATCAG	-32	True	NA	NA	False	AATAAA	-19	NA	8042865	8037397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8042492_8042670
ES.34396.3	chr9	-	177	1	Intergenic	novelGene_28007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTTAGCTTGGATA	4501	False	NA	NA	False	NA	NA	NA	8038332	8038155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_8038200_8038300
ES.34397.1	chr9	-	176	1	Intergenic	novelGene_28008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	8046553	8046377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_8046400_8046600
ES.34398.1	chr9	+	176	1	Intergenic	novelGene_28009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	8057252	8057428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_8057300_8057400
ES.34399.1	chr9	-	6534	8	NIC	ENSMUSG00000040729.9	novel	4955	12	NA	NA	-6640	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	3.20713490294909	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	8106531	8076461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8078360_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8104653
ES.34399.2	chr9	-	3970	11	FSM	ENSMUSG00000040729.9	ENSMUST00000037397.8	3819	11	-151	0	-151	0	multi-exon	FALSE	canonical	1	3	junction_3	3.74299345444258	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTGCTTTTTAT	8	True	NA	NA	False	AATAAA	-20	NA	8134446	8076461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_8076948_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
ES.34399.3	chr9	-	5444	10	NIC	ENSMUSG00000040729.9	novel	3819	11	NA	NA	-150	-1	intron_retention	FALSE	canonical	1	3	junction_3	3.64471543707927	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGATCTCTGCTTTTTA	9	True	NA	NA	False	AATAAA	-19	NA	8134445	8076462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8076948_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
ES.34399.4	chr9	-	5121	1	Intergenic	novelGene_28010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATACAAAGATTTTTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	8111722	8106601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_8106600_8111700
ES.344.1	chr1	-	3146	7	FSM	ENSMUSG00000026080.15	ENSMUST00000027249.13	2975	7	-171	0	-20	0	multi-exon	FALSE	canonical	2	9	junction_6	2.75378527364305	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937262	38902947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
ES.344.2	chr1	-	3216	8	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	5.65685424949238	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937234	38902947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38905117_38905679_38905778_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
ES.344.3	chr1	-	3226	8	NIC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_6	4.89064079103534	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937234	38902947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38933644_38933753_38935017_38935138_38936970
ES.344.4	chr1	-	2899	7	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	37	0	intron_retention	FALSE	non_canonical	0	0	junction_3	6.60176744011279	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937030	38902947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38905117_38907061_38907168_38910681_38910910_38913029_38913122_38923430_38923563_38935017_38935138_38936978
ES.344.5	chr1	-	3169	8	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	-21	2	intron_retention	FALSE	canonical	1	1	junction_6	5.57692037026947	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTATCTGGGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	38937191	38902953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38933644_38933753_38935017_38935138_38936978
ES.344.6	chr1	-	3308	9	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	5.085211401702	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAAAGTGTATCTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	38937228	38902957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38905117_38905679_38905778_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38933644_38933753_38935017_38935138_38936970
ES.344.7	chr1	-	2802	7	NNC	ENSMUSG00000026080.15	novel	2975	7	NA	NA	8	-302	intron_retention	FALSE	canonical	1	1	junction_4	4.95535624910617	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGACCCATGATCCCC	NA	False	NA	NA	False	AGTAAA	-22	NA	38937226	38903259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923426_38923563_38935017_38935138_38936970
ES.344.8	chr1	-	2416	1	NIC	ENSMUSG00000026080.15	novel	2431	6	NA	NA	-11985	-7381	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGGCCCTCCCTTAGC	NA	False	NA	NA	False	NA	NA	NA	38922826	38920410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_38920400_38922800
ES.3440.1	chr10	-	180	1	Intergenic	novelGene_2652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAAAGAGTTT	1842	False	NA	NA	False	NA	NA	NA	82688780	82688600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82688600_82688800
ES.34400.1	chr9	+	2040	1	Intergenic	novelGene_28011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	8631509	8633549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_8631500_8633500
ES.34401.1	chr9	+	4777	8	FSM	ENSMUSG00000031870.17	ENSMUST00000189181.7	6889	8	1283	829	648	-829	multi-exon	FALSE	canonical	1	1	junction_4	2.32992949004287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATACCTGGGAACTTTT	548	False	NA	NA	False	AATAAA	-27	NA	8901116	8967783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_8902085_8903596_8903749_8922599_8922717_8946645_8946952_8956244_8956390_8958330_8958462_8961396_8961555_8964983
ES.34401.2	chr9	+	7015	4	FSM	ENSMUSG00000031870.17	ENSMUST00000151080.2	3897	4	1091	-4209	1042	4209	multi-exon	FALSE	canonical	3	5	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAAAAGTGTTCCTTT	942	False	NA	NA	False	AATAAA	-16	NA	8901510	8952817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_8902085_8903596_8903749_8922599_8922717_8946645
ES.34401.3	chr9	+	1614	7	ISM	ENSMUSG00000031870.17	ENSMUST00000070463.10	3068	8	1053	3830	1053	-3830	5prime_fragment	FALSE	canonical	1	1	junction_4	2.35702260395516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGTCTTAGTTGG	953	False	NA	NA	False	NA	NA	NA	8901521	8961596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_8902085_8903596_8903749_8922599_8922717_8946645_8946952_8956244_8956390_8958330_8958462_8961396
ES.34401.4	chr9	+	4961	8	FSM	ENSMUSG00000031870.17	ENSMUST00000189181.7	6889	8	1928	0	1293	0	multi-exon	FALSE	canonical	1	1	junction_4	2.32992949004287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAACTTGTAACTTCTA	20	True	NA	NA	False	AATAAA	-22	NA	8901761	8968612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_8902085_8903596_8903749_8922599_8922717_8946645_8946952_8956244_8956390_8958330_8958462_8961396_8961555_8964983
ES.34402.1	chr9	+	5171	1	FSM	ENSMUSG00000078117.3	ENSMUST00000104915.3	3983	1	-1191	3	-1191	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAAATATGTGTCT	NA	False	NA	NA	False	AATAAA	-9	NA	8970600	8975771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_8970600_8975800
ES.34403.1	chr9	+	5385	3	Antisense	novelGene_ENSMUSG00000050730.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAACAA	NA	False	NA	NA	False	TTTAAA	-9	NA	9067959	9074663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_9069518_9069562_9070950_9072223
ES.34403.2	chr9	+	5420	3	Antisense	novelGene_ENSMUSG00000050730.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAACACTTGTTTCAGG	NA	False	NA	NA	False	NA	NA	NA	9067959	9074717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_9069499_9069562_9070950_9072223
ES.34404.1	chr9	+	175	1	Intergenic	novelGene_28012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCGACAGAAGCGAGTAG	NA	False	NA	NA	False	NA	NA	NA	9098296	9098471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_9098300_9098500
ES.34405.1	chr9	+	209	1	Intergenic	novelGene_28013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACATTGAGGGTGAGGAC	NA	False	NA	NA	False	NA	NA	NA	9128886	9129095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_9128900_9129100
ES.34406.1	chr9	+	1772	1	Intergenic	novelGene_28014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9225739	9227511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_9225700_9227500
ES.34407.1	chr9	-	6043	23	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	19.4112198108582	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTCTTTTGTAGTTAC	-2	True	NA	NA	False	AATAAA	-20	NA	9239032	8994328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155361_9180023_9180124_9238630
ES.34407.10	chr9	-	5872	23	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-36	-245	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	15.4475920186142	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGTGAAGAAGCAT	6	True	NA	0	True	AATAAA	-21	NA	9239067	8994574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9180027_9180124_9238630
ES.34407.11	chr9	-	6010	25	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-259	-247	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_24	14.1729765359606	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGCAGTGTGAAGAAGC	NA	False	NA	-2	True	AATAAA	-19	NA	9239365	8994576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630_9239022_9239241
ES.34407.12	chr9	-	5881	23	FSM	ENSMUSG00000050730.18	ENSMUST00000093893.12	6116	23	-12	247	-12	-247	multi-exon	FALSE	canonical	0	0	junction_19	15.3348304455376	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGCAGTGTGAAGAAGC	-3	True	NA	-2	True	AATAAA	-19	NA	9239118	8994576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.13	chr9	-	6296	26	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	14	-247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	21.7605146997951	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGCAGTGTGAAGAAGC	-19	True	NA	-2	True	AATAAA	-19	NA	9239092	8994576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9124708_9124884_9125289_9125454_9155303_9155366_9180027_9180124_9238630
ES.34407.14	chr9	-	5787	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-27	-458	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGTCTTGGGGGTTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	9239133	8994787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.15	chr9	-	5513	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-42	-747	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATGATATATGGGAGAG	NA	False	NA	NA	False	NA	NA	NA	9239148	8995076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.16	chr9	-	3955	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	11	-2252	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGAAAATTATGTCTTC	20	False	NA	NA	False	TATAAA	-27	NA	9239095	8996581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.19	chr9	-	3729	24	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	10	-2437	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.1462935380082	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCATATTTTTTGCT	19	False	NA	NA	False	AATAAA	-3	NA	9239096	8996766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008072_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.23	chr9	-	3929	25	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-6	-2439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	19.0895186482588	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTGCATATTTTTTG	3	True	NA	NA	False	AATAAA	-1	NA	9239112	8996768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9217180_9217325_9238630
ES.34407.26	chr9	-	3465	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-43	-2796	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTGGTCCTAAACAT	NA	False	NA	NA	False	AATATA	-19	NA	9239149	8997125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.27	chr9	-	3224	22	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-42	-2801	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	15.490323217373	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTATTTTGCTGGTCCTA	NA	False	NA	NA	False	AATATA	-14	NA	9239148	8997130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.28	chr9	-	3145	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-12	-3085	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTCTTTTGGCTGTTTT	-3	True	NA	NA	False	CATAAA	-14	NA	9239118	8997414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.29	chr9	-	3551	23	NNC	ENSMUSG00000050730.18	novel	1868	16	NA	NA	-11	-8423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8154626618374	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACCTGCCTCACCTCCTG	-2	True	NA	NA	False	CATAAA	-18	NA	9239117	9002752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_9003512_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.3	chr9	-	6225	25	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-231	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_24	14.1729765359606	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTTTCTCTTTTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	9239337	8994333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630_9239022_9239241
ES.34407.30	chr9	-	3374	22	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-43	8168	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	7.11550317880109	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGACTTTTAAAAGT	NA	False	NA	NA	False	AGTAAA	-24	NA	9239149	9003070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.31	chr9	-	6769	1	Intergenic	novelGene_28015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTTGCAGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	9299536	9292767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_9292800_9299500
ES.34407.4	chr9	-	5985	24	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	-36	-244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.1590184777851	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTGTGAAGAAGCATT	6	True	NA	1	True	AATAAA	-22	NA	9239067	8994573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016914_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ES.34407.5	chr9	-	5232	3	ISM	ENSMUSG00000050730.18	ENSMUST00000093893.12	6116	23	233447	244	233246	-244	3prime_fragment	FALSE	canonical	3	47	junction_2	15	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTGTGAAGAAGCATT	NA	False	NA	1	True	AATAAA	-22	NA	9005659	8994573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_8997687_8998166_8998247_9003620
ES.34407.7	chr9	-	5775	25	NNC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	125	-245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	18.9644678719617	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGTGAAGAAGCAT	335	False	NA	0	True	AATAAA	-21	NA	9238780	8994574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9229835_9229964_9238630
ES.34408.1	chr9	-	177	1	Intergenic	novelGene_28016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTATTCAGTA	NA	False	NA	NA	False	NA	NA	NA	9513717	9513540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_9513500_9513700
ES.34409.1	chr9	-	159	1	Intergenic	novelGene_28017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	9573628	9573469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_9573500_9573600
ES.3441.1	chr10	-	174	1	Intergenic	novelGene_2653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCGGAGCAAGCGAGGC	NA	False	NA	NA	False	NA	NA	NA	82698144	82697970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82698000_82698100
ES.34410.1	chr9	+	2727	1	Intergenic	novelGene_28018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	11216131	11218858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_11216100_11218900
ES.34411.1	chr9	+	175	1	Intergenic	novelGene_28019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12550494	12550669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_12550500_12550700
ES.34412.1	chr9	-	1050	1	Intergenic	novelGene_28020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAGAGAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	12740423	12739373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_12739400_12740400
ES.34413.1	chr9	+	388	1	Intergenic	novelGene_28021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	13239819	13240207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_13239800_13240200
ES.34414.1	chr9	-	3401	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-295	117	-295	-117	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATTATTAGCAAAATTG	NA	False	NA	NA	False	ATTAAA	-5	NA	13246129	13242728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13242700_13246100
ES.34414.2	chr9	-	3186	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-306	343	-306	-343	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAATGTTTTGATTTT	NA	False	NA	-3	True	ATTAAA	-18	NA	13246140	13242954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13243000_13246100
ES.34414.3	chr9	-	2622	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-309	910	-309	-910	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGATTTTTGGGAGTT	NA	False	NA	NA	False	AATGAA	-38	NA	13246143	13243521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13243500_13246100
ES.34414.4	chr9	-	2470	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	-274	1027	-274	-1027	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCTATGAATTATAAA	NA	False	NA	NA	False	AATAAA	-17	NA	13246108	13243638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13243600_13246100
ES.34415.1	chr9	+	4941	9	FSM	ENSMUSG00000079084.13	ENSMUST00000110583.12	4695	9	-82	-164	-41	0	multi-exon	FALSE	canonical	2	2	junction_1	10.3855368180947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTATTCTGTATCT	NA	False	NA	NA	False	AATAAA	-20	NA	13246494	13292867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13248883_13248968_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
ES.34415.2	chr9	+	1161	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	-9	1217	-9	1013	multi-exon	FALSE	canonical	3	27	junction_1	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGGAATTCATTTCCC	NA	False	NA	3	True	AATAAA	-15	NA	13246600	13253207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13251695_13252424_13252850
ES.34415.3	chr9	+	1812	8	FSM	ENSMUSG00000079084.13	ENSMUST00000217444.4	4816	8	75	2929	1	-2765	multi-exon	FALSE	canonical	2	4	junction_3	11.4944529656523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACAGTTTCATAGATT	NA	False	NA	NA	False	CATAAA	-17	NA	13246610	13289938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
ES.34415.4	chr9	+	4254	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	1	-1886	1	1589	multi-exon	FALSE	canonical	3	27	junction_1	5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGAATTTTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	13246610	13256310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13251695_13252424_13252850
ES.34415.5	chr9	+	4531	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	13	-2175	13	1878	multi-exon	FALSE	canonical	3	27	junction_1	5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCTGCTTACCAGCAT	NA	False	NA	NA	False	AATAAA	-14	NA	13246622	13256599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13251695_13252424_13252850
ES.34415.6	chr9	+	4540	8	FSM	ENSMUSG00000079084.13	ENSMUST00000217444.4	4816	8	110	166	9	-2	multi-exon	FALSE	canonical	2	4	junction_3	11.4944529656523	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCTCTTTCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	13246645	13292701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13246677_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
ES.34415.7	chr9	+	4564	3	ISM	ENSMUSG00000079084.13	ENSMUST00000239561.1	3799	7	24782	3	-962	-3	3prime_fragment	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTCTCTTTCTCTGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	13271442	13292700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13272821_13281884_13282071_13289700
ES.34416.1	chr9	+	3221	1	Intergenic	novelGene_28022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACATGGATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13370330	13373551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_13370300_13373600
ES.34417.1	chr9	-	191	1	Intergenic	novelGene_28023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATGCAAAAGAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	13431635	13431444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13431400_13431600
ES.34418.1	chr9	-	174	1	Intergenic	novelGene_28024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAACGAA	NA	False	NA	NA	False	NA	NA	NA	13583711	13583537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13583500_13583700
ES.34419.1	chr9	+	2955	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39436	863	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTGTAAAGAATATT	NA	False	NA	NA	False	AATAAA	-14	NA	13613191	13619504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.34419.2	chr9	+	4138	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39443	10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAAGTGGTTTTCTTCT	NA	False	NA	NA	False	TTTAAA	-5	NA	13613198	13620694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.34419.3	chr9	+	1631	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39485	-410	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATCCCATATCATAATAG	NA	False	NA	NA	False	AATAGA	-15	NA	13613240	13618229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.34419.4	chr9	+	3023	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39505	1000	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAAAGTTTTGTATCAT	NA	False	NA	NA	False	AGTAAA	-22	NA	13613260	13619641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.34419.5	chr9	+	2025	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39520	17	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCCTTGCCATGTAGG	NA	False	NA	NA	False	NA	NA	NA	13613275	13618658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.34419.6	chr9	+	2144	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39568	184	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGAATGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	13613323	13618825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13613418_13613539_13613652_13616887
ES.3442.1	chr10	+	167	1	Intergenic	novelGene_2654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAACCCTCACCCA	NA	False	NA	NA	False	NA	NA	NA	82737836	82738003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82737800_82738000
ES.34420.1	chr9	-	166	1	Intergenic	novelGene_28025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13657920	13657754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13657800_13657900
ES.34421.1	chr9	+	3200	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	717	-129	-54	129	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATTGTTTGAACTGT	NA	False	NA	NA	False	AAAAAG	-11	NA	13660422	13717906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.10	chr9	+	2630	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-19	495	-3	-494	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGGCATAGTAGGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	13660473	13717282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.11	chr9	+	3115	16	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	138.108491974808	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660473	13717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713294_13714720_13714835_13716101_13716279_13716670
ES.34421.12	chr9	+	4015	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	-2	2427	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_15	101.361311926965	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTGCTATGTT	NA	False	NA	NA	False	AATAAA	-27	NA	13660474	13720204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.13	chr9	+	2544	12	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	158.665925872753	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660475	13717776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13710458_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.14	chr9	+	3142	16	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	136.915967740152	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660475	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714699_13714835_13716101_13716279_13716670
ES.34421.15	chr9	+	3494	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-16	-372	0	372	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGTTCCCAGCATT	NA	False	NA	NA	False	TATAAA	-16	NA	13660476	13718149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.16	chr9	+	4079	17	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	1	2427	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	126.952193265812	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTGCTATGTT	NA	False	NA	NA	False	AATAAA	-27	NA	13660481	13720204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.17	chr9	+	3260	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-11	-143	1	143	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGTCCTGGTGTTGA	NA	False	NA	NA	False	AAAAAG	-25	NA	13660481	13717920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.18	chr9	+	3023	15	NNC	ENSMUSG00000031918.17	novel	3788	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	114.207026482433	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660481	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706696_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.19	chr9	+	713	4	ISM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	5	20309	1	-1	5prime_fragment	FALSE	canonical	3	129	junction_2	81.4957394932739	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACTTGGGAGGCAGCG	NA	False	NA	NA	False	ATTAAA	-21	NA	13660481	13697468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147
ES.34421.2	chr9	+	3116	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	-27	-1	-27	1	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTCCACAGTTGTCTAA	NA	False	NA	28	True	ATTAAA	-17	NA	13660449	13717778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.21	chr9	+	3084	14	NIC	ENSMUSG00000031918.17	novel	3788	15	NA	NA	1	148	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	116.659013555691	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGGTGTTGATTTTG	NA	False	NA	NA	False	AAAAAG	-30	NA	13660481	13717925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13660697_13693572_13693679_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.24	chr9	+	3677	15	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_8	140.380695951824	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTTGTCCACAGTTG	NA	False	NA	23	True	ATTAAA	-12	NA	13660482	13717773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706504_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.25	chr9	+	2903	15	NIC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	141.568347234739	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660482	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716670
ES.34421.26	chr9	+	4013	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	2	2412	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	138.325927512604	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTTTGTTTTTGATACG	NA	False	NA	NA	False	AATAAA	-12	NA	13660482	13720189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714699_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.27	chr9	+	4028	18	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	2	2419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	149.262407979994	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGATACGAGGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	13660482	13720196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13717756_13717797_13718567_13719997
ES.34421.28	chr9	+	3206	17	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.441555594507	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660482	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671692_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.29	chr9	+	4167	18	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	2	2413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	161.097876930632	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGTTTTTGATACGA	NA	False	NA	NA	False	AATAAA	-13	NA	13660482	13720190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713212_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.3	chr9	+	3142	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	-36	0	-20	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660456	13717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.30	chr9	+	3010	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	778	0	3	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660483	13717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.31	chr9	+	2360	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	9	719	5	-718	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACTGCAGTCCTGTAT	NA	False	NA	NA	False	ATTAAA	-36	NA	13660485	13717058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.32	chr9	+	4095	17	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	5	2413	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	127.425085221671	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGTTTTTGATACGA	NA	False	NA	NA	False	AATAAA	-13	NA	13660485	13720190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.33	chr9	+	6897	13	NIC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	5	-1	intron_retention	FALSE	canonical	3	129	junction_2	110.212263635022	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660485	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13707443_13710445_13710632_13711171_13714835_13716101_13716279_13716670
ES.34421.34	chr9	+	3312	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	6	129	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATTGTTTGAACTGT	NA	False	NA	NA	False	AAAAAG	-11	NA	13660486	13717906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.35	chr9	+	3173	17	NNC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	159.024946451021	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660486	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13697533_13697597_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.36	chr9	+	3173	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	146.998352220546	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13660486	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716394_13716563_13716670
ES.34421.38	chr9	+	4007	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	51	2427	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	139.725922195323	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTGCTATGTT	NA	False	NA	NA	False	AATAAA	-27	NA	13660543	13720204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713149_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.39	chr9	+	560	3	FSM	ENSMUSG00000031918.17	ENSMUST00000134530.2	442	3	-119	1	-49	1	multi-exon	FALSE	canonical	3	316	junction_2	26.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTGGGAGGCAGCGTC	NA	False	NA	NA	False	ATTAAA	-23	NA	13660565	13697470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13697147
ES.34421.4	chr9	+	4393	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	-20	2414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.718128943797	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTTTTTGATACGAG	NA	False	NA	NA	False	AATAAA	-14	NA	13660456	13720191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697597_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
ES.34421.40	chr9	+	180	1	Intergenic	novelGene_28028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATTCTGCACAATC	NA	False	NA	NA	False	NA	NA	NA	13691460	13691640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_13691500_13691600
ES.34421.41	chr9	+	2615	12	ISM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	39383	1	-7397	0	3prime_fragment	FALSE	canonical	3	360	junction_3	36.607139257638	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13699875	13717776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.42	chr9	+	5510	10	NIC	ENSMUSG00000031918.17	novel	3788	15	NA	NA	-6924	0	intron_retention	FALSE	canonical	3	360	junction_2	34.756649599149	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13700348	13717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.43	chr9	+	2408	10	ISM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	42780	3	-4000	-2	3prime_fragment	FALSE	canonical	3	360	junction_1	34.4157586643742	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTTGTCCACAGTTGT	NA	False	NA	24	True	ATTAAA	-13	NA	13703272	13717774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.44	chr9	+	2308	9	ISM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	43951	0	-2829	0	3prime_fragment	FALSE	canonical	3	385	junction_8	29.5906974402429	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13704443	13717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.45	chr9	+	10933	4	NIC	ENSMUSG00000031918.17	novel	3788	15	NA	NA	-2629	-1	intron_retention	FALSE	canonical	3	385	junction_3	42.0898509804389	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTCCACAGTTGTC	NA	False	NA	25	True	ATTAAA	-14	NA	13704643	13717775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13710632_13711171_13714835_13716101_13716279_13716670
ES.34421.5	chr9	+	3206	17	NIC	ENSMUSG00000031918.17	novel	3106	16	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	3	121	junction_4	125.44469336624	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACAGTTGTCTAAAGTA	NA	False	NA	32	True	ATTAAA	-21	NA	13660468	13717782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13660697_13671713_13671785_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.6	chr9	+	2321	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	765	702	-6	-701	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACTGGGAGCAAGT	NA	False	NA	NA	False	ACTAAA	-15	NA	13660470	13717075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.7	chr9	+	2242	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	-6	852	-6	-851	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTCGGATGCTGTATT	NA	False	NA	NA	False	TTTAAA	-16	NA	13660470	13716925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34421.8	chr9	+	3042	15	NNC	ENSMUSG00000031918.17	novel	3788	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	113.33947562387	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCCACAGTTGTCT	NA	False	NA	26	True	ATTAAA	-15	NA	13660471	13717776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714699_13714835_13716101_13716279_13716670
ES.34421.9	chr9	+	2592	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	-5	501	-5	-500	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTATTATGGCATAGT	NA	False	NA	NA	False	AGTAAA	-12	NA	13660471	13717276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ES.34422.1	chr9	+	4336	10	NNC	ENSMUSG00000037808.14	novel	540	3	NA	NA	-1093	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.438094867836	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCTGTAATGAATGAC	NA	False	NA	NA	False	AATAAA	-23	NA	13737918	13757825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13738914_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748135_13748269_13750935_13751038_13755324
ES.34422.10	chr9	+	4218	10	NIC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	3	-14	intron_retention	FALSE	canonical	2	6	junction_7	44.8109885112795	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGCTGTAATGAATG	NA	False	NA	NA	False	AATAAA	-21	NA	13739014	13757823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13748013_13748132_13748269_13750935_13751038_13755324
ES.34422.12	chr9	+	3861	12	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	-5	-19	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	66.2421054083097	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTCTGCTGTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	13739025	13757818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
ES.34422.13	chr9	+	1368	10	ISM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	20	6659	1	-184	5prime_fragment	FALSE	canonical	2	6	junction_8	56.5901444108817	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGAAATCACTTGAAAG	NA	False	NA	NA	False	ATTAAA	-7	NA	13739031	13751178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935
ES.34422.14	chr9	+	3737	11	FSM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	23	0	4	0	multi-exon	FALSE	canonical	2	6	junction_8	54.6652540467892	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739034	13757837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
ES.34422.15	chr9	+	3797	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	54.2867387121385	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGTAATGAATGACT	NA	False	NA	NA	False	AATAAA	-24	NA	13739039	13757826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34422.16	chr9	+	3967	13	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	10	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	70.4183431753088	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGATTCTGCTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	13739040	13757816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13751174_13751298_13755324
ES.34422.17	chr9	+	2589	12	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	28	-1253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.5254278948856	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	NA	False	NA	3	True	ATTAAA	-15	NA	13739058	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740119_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748135_13748269_13750935_13751038_13755324
ES.34422.18	chr9	+	2452	11	FSM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	55	1253	36	-1253	multi-exon	FALSE	canonical	2	6	junction_8	54.6652540467892	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	NA	False	NA	3	True	ATTAAA	-15	NA	13739066	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
ES.34422.19	chr9	+	2703	13	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	39	-1256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	70.4183431753088	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATCCGTGCTTATGTC	NA	False	NA	0	True	ATTAAA	-12	NA	13739069	13756581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13751174_13751298_13755324
ES.34422.2	chr9	+	2549	10	NNC	ENSMUSG00000037808.14	novel	540	3	NA	NA	-544	-1253	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	45.9253285504757	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	NA	False	NA	3	True	ATTAAA	-15	NA	13738467	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13738914_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34422.21	chr9	+	6011	9	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	222	-1250	intron_retention	TRUE	non_canonical	0	0	junction_8	60.5453084474759	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGCTTATGTCTGAATA	NA	False	NA	6	True	ATTAAA	-18	NA	13739252	13756587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13751393_13754724
ES.34422.23	chr9	+	3764	8	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	2751	-23	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	59.0409750486378	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGTTGATTCTGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	13741781	13757814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748135_13748269_13750935_13751038_13755324
ES.34422.24	chr9	+	5463	6	NIC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	2832	-22	intron_retention	FALSE	canonical	3	110	junction_3	14.993331851193	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTGATTCTGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	13741862	13757815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34422.25	chr9	+	2864	2	ISM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	10422	1253	1261	-1253	3prime_fragment	FALSE	canonical	3	148	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	127	False	NA	3	True	ATTAAA	-15	NA	13749433	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_13751038_13755324
ES.34422.26	chr9	+	2730	2	NNC	ENSMUSG00000037808.14	novel	697	2	NA	NA	2352	-1253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	1218	False	NA	3	True	ATTAAA	-15	NA	13750524	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13751381_13754710
ES.34422.27	chr9	+	1896	1	NIC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	6516	-1253	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCGTGCTTATGTCTGA	3269	False	NA	3	True	ATTAAA	-15	NA	13754688	13756584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13754700_13756600
ES.34422.4	chr9	+	3817	11	NNC	ENSMUSG00000037808.14	novel	540	3	NA	NA	-515	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.2926536021362	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGCTGTAATGAATG	NA	False	NA	NA	False	AATAAA	-21	NA	13738496	13757823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_13738914_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
ES.34422.5	chr9	+	3721	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	-19	0	-19	0	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13738992	13757837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34422.6	chr9	+	4299	9	NIC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	-13	-1250	intron_retention	FALSE	canonical	3	110	junction_6	14.3390855705655	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGCTTATGTCTGAATA	NA	False	NA	6	True	ATTAAA	-18	NA	13738998	13756587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34422.7	chr9	+	2452	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	-2	1252	-2	-1252	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCGTGCTTATGTCTGAA	NA	False	NA	4	True	ATTAAA	-16	NA	13739009	13756585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ES.34423.1	chr9	-	5909	1	Intergenic	novelGene_28026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCTTAACAAGCTCAAT	NA	False	NA	NA	False	NA	NA	NA	13668601	13662692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13662700_13668600
ES.34423.2	chr9	-	3664	1	Intergenic	novelGene_28027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCAAGCTCTAGCTGCA	NA	False	NA	NA	False	TTTAAA	-14	NA	13669009	13665345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13665300_13669000
ES.34424.1	chr9	-	11095	1	Antisense	novelGene_ENSMUSG00000031918.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTTACTTTGTTACA	NA	False	NA	NA	False	NA	NA	NA	13713490	13702395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_13702400_13713500
ES.34425.1	chr9	-	2265	10	FSM	ENSMUSG00000031922.13	ENSMUST00000142494.8	2173	10	-88	-4	-26	4	multi-exon	FALSE	canonical	1	1	junction_2	82.7754660378169	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGGCTTTATTTGTCA	NA	False	NA	NA	False	AATAAA	-32	NA	13738375	13719083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.10	chr9	-	2761	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-470	-29	-318	-1	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGCTAACAAAGGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13738721	13719091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.11	chr9	-	4234	10	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	149	junction_3	38.3148103395805	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGCTAACAAAGGCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	13738346	13719091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.12	chr9	-	5283	10	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-15	-2	intron_retention	FALSE	canonical	2	11	junction_9	75.7277449685694	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAGCTAACAAAGGCTT	NA	False	NA	NA	False	AATAAA	-23	NA	13738364	13719092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13732980_13737837
ES.34425.13	chr9	-	2016	12	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1088824216403	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738386	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13719540_13720024_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.14	chr9	-	2791	11	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-304	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	78.535597024534	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738707	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721270_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.15	chr9	-	2597	12	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	93.9848765748691	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738370	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13737837_13737950_13738151
ES.34425.16	chr9	-	2273	11	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.2003156559366	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738362	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13721955_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.17	chr9	-	3275	10	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	149	junction_4	40.9254063985795	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738406	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.18	chr9	-	2262	10	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	97.0774159697199	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738403	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730315_13732822_13732980_13738151
ES.34425.19	chr9	-	4271	10	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	15	junction_8	75.2698847850557	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	13738406	13719094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730315_13732822_13732980_13738151
ES.34425.20	chr9	-	2396	10	NNC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	94.7813598385226	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAGCCAGCTAACAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	13738375	13719096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732966_13738151
ES.34425.21	chr9	-	2690	10	NIC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	92.2413634754087	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAACAGCCAGCTAACAAA	NA	False	NA	NA	False	AATAAA	-18	NA	13738342	13719097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13737837
ES.34425.23	chr9	-	5132	1	NIC	ENSMUSG00000031922.13	novel	2173	10	NA	NA	-2521	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAACAGCCAGCTAACA	NA	False	NA	NA	False	AATAAA	-16	NA	13724231	13719099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13719100_13724200
ES.34425.24	chr9	-	2164	12	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1088824216403	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAACAGCCAGCTAACA	NA	False	NA	NA	False	AATAAA	-16	NA	13738376	13719099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13719540_13719861_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.25	chr9	-	4919	9	NIC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	6	-11	intron_retention	FALSE	canonical	3	207	junction_5	24.4537190423052	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTTAACAGCCAGCTAA	NA	False	NA	NA	False	AATAAA	-14	NA	13738342	13719101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.26	chr9	-	2204	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-135	193	17	166	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGTTTACAGTTTTTAG	NA	False	NA	NA	False	AATAAA	-28	NA	13738386	13719313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.27	chr9	-	4830	9	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	17	160	intron_retention	FALSE	canonical	2	11	junction_8	84.2822638518924	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTACACGTTTACAGT	NA	False	NA	NA	False	AATAAA	-22	NA	13738234	13719319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13737837
ES.34425.28	chr9	-	2134	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	0	389	0	1	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTTTGCTTTGGTAT	NA	False	NA	0	True	ATTAAA	-19	NA	13738403	13719478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.29	chr9	-	4525	9	NNC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	27	0	intron_retention	FALSE	non_canonical	0	0	junction_5	94.2841450085856	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTTTGCTTTGGTA	NA	False	NA	-1	True	ATTAAA	-18	NA	13738376	13719479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727438_13728182_13728300_13729618_13729741_13730154_13732980_13738151
ES.34425.3	chr9	-	5017	10	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	0	4	intron_retention	FALSE	canonical	3	149	junction_4	36.2280158965747	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGGCTTTATTTGTCA	NA	False	NA	NA	False	AATAAA	-32	NA	13738403	13719083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13732980_13738151
ES.34425.30	chr9	-	2964	3	ISM	ENSMUSG00000031922.13	ENSMUST00000124883.8	1643	9	5893	5	-2379	-5	intron_retention	FALSE	canonical	3	225	junction_1	9	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGACTTTGTTTTGCTT	NA	False	NA	-6	True	ATTAAA	-13	NA	13724089	13719484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_13720137_13721155_13721301_13721922
ES.34425.31	chr9	-	2037	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-141	366	11	-7	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAAGACTTTGTTTTGC	NA	False	NA	-8	True	ATTAAA	-11	NA	13738392	13719486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.32	chr9	-	2279	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	-318	562	-318	-172	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGTGTTTTTTAAACT	NA	False	NA	-1	True	NA	NA	NA	13738721	13719651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.4	chr9	-	2670	12	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-304	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	76.1088824216403	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAAGGCTTTATTTGTC	NA	False	NA	NA	False	AATAAA	-31	NA	13738707	13719084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151_13738492_13738653
ES.34425.5	chr9	-	5621	8	NIC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	-4	1	intron_retention	FALSE	canonical	3	207	junction_4	26.1065321405997	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAACAAAGGCTTTATTTG	NA	False	NA	NA	False	AATAAA	-29	NA	13738407	13719086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.6	chr9	-	2834	11	NNC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	406	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	79.3466445415306	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTAACAAAGGCTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	13737845	13719088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13737283
ES.34425.7	chr9	-	3279	9	NIC	ENSMUSG00000031922.13	novel	2523	11	NA	NA	-26	-1	intron_retention	FALSE	canonical	1	1	junction_1	87.5827287483097	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTAACAAAGGCTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	13738375	13719088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13721301_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ES.34425.8	chr9	-	5531	8	NIC	ENSMUSG00000031922.13	novel	2262	10	NA	NA	23	0	intron_retention	FALSE	canonical	3	58	junction_2	66.905965079844	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738380	13719090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_13720137_13721155_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13732980_13738151
ES.34426.1	chr9	-	201	1	Intergenic	novelGene_28029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGAGCTATTTTGATA	NA	False	NA	NA	False	NA	NA	NA	13741397	13741196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13741200_13741400
ES.34427.1	chr9	-	157	1	Intergenic	novelGene_28030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	13866726	13866569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_13866600_13866700
ES.34428.1	chr9	+	2192	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	-32	6965	-32	319	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGCTCAAGCAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	14187564	14237432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ES.34428.2	chr9	+	2007	5	ISM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	19	17356	19	-863	5prime_fragment	FALSE	canonical	3	46	junction_3	6.75925291729789	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTCATCAAACAGGTA	NA	False	NA	NA	False	AATAAA	-22	NA	14187615	14227041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791
ES.34428.3	chr9	+	1974	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	23	7128	23	156	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAACCCTGGCGAGTA	NA	False	NA	NA	False	NA	NA	NA	14187619	14237269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ES.34428.4	chr9	+	4493	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	28	4604	28	2680	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATGGTTCATGGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	14187624	14239793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ES.34428.5	chr9	+	1733	5	ISM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	71	17578	71	-1085	5prime_fragment	FALSE	canonical	3	46	junction_3	6.75925291729789	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTCTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-8	NA	14187667	14226819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791
ES.34428.6	chr9	+	9013	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	112	0	112	0	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTTCTTTCTTTAAT	NA	False	NA	9	True	AATAAA	-15	NA	14187708	14244397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ES.34428.7	chr9	+	3043	1	Intergenic	novelGene_28031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	ATTAAA	-19	NA	14194641	14197684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14194600_14197700
ES.34429.1	chr9	-	4272	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	183	15	-76	-15	multi-exon	FALSE	canonical	3	20	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTGGGCTATATG	NA	False	NA	-15	True	NA	NA	NA	14292355	14265300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14269184_14291966
ES.34429.2	chr9	-	1621	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	235	2614	-24	-72	multi-exon	FALSE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTTATGTTTACCC	NA	False	NA	NA	False	TTTAAA	-25	NA	14292303	14267899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14269184_14291966
ES.3443.1	chr10	+	188	1	Intergenic	novelGene_2655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGGAGCCATTATT	NA	False	NA	NA	False	NA	NA	NA	82751202	82751390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_82751200_82751400
ES.34430.1	chr9	+	175	1	Intergenic	novelGene_28032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	14310863	14311038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14310900_14311000
ES.34431.1	chr9	-	2459	2	Genic_Genomic	ENSMUSG00000098832.3	novel	1187	1	NA	NA	-3484	974	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGTGTGGTTAATAC	NA	False	NA	NA	False	AATAAA	-15	NA	14366802	14361157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_14363533_14366718
ES.34432.1	chr9	+	950	7	NNC	ENSMUSG00000004096.10	novel	831	7	NA	NA	-86	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	413.079491946365	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411826	14421669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421500
ES.34432.10	chr9	+	820	7	NNC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	32	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	341.214334725583	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGACTTTTTTTTTTGG	NA	False	NA	20	True	ATTAAA	-20	NA	14411974	14421668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14412054_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ES.34432.13	chr9	+	5570	4	NIC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	34	8	intron_retention	FALSE	canonical	3	777	junction_1	75.4644876010491	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGACTTTTTTTTTTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	14411976	14421669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14412078_14413211_14413351_14414109_14419266_14421495
ES.34432.14	chr9	+	718	5	NNC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	35	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	391.458410945531	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATAAACCACTGTCCCC	NA	False	NA	-7	True	AATAAA	-11	NA	14411977	14421838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14412078_14413211_14413260_14416128_14416237_14419146_14419266_14421495
ES.34432.16	chr9	+	4771	4	NIC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	1056	7	intron_retention	FALSE	canonical	3	900	junction_1	24.7116706571342	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGACTTTTTTTTTTGG	NA	False	NA	20	True	ATTAAA	-20	NA	14413237	14421668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14413351_14414109_14414223_14414893_14419266_14421495
ES.34432.2	chr9	+	982	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	-72	201	-72	11	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTTTTTTTGGTTTC	NA	False	NA	24	True	ATTAAA	-24	NA	14411840	14421672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ES.34432.3	chr9	+	1220	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	-66	-43	-66	43	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTACTTTTGTGTGCTG	NA	False	NA	46	True	TATAAA	-27	NA	14411846	14421916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ES.34432.4	chr9	+	1139	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	-59	-249	-29	37	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAAACTACTTTTGT	NA	False	NA	40	True	TATAAA	-21	NA	14411883	14421910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ES.34432.5	chr9	+	977	8	NNC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	403.80066814189	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGACTTTTTTTTTT	NA	False	NA	18	True	ATTAAA	-18	NA	14411929	14421666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14412078_14413211_14413351_14414109_14414223_14414394_14414485_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ES.34432.6	chr9	+	3925	6	NIC	ENSMUSG00000004096.10	novel	831	7	NA	NA	-5	-18	intron_retention	FALSE	canonical	3	58	junction_1	341.876234915503	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCACTGTCCCCAA	NA	False	NA	-5	True	AATAAA	-13	NA	14411937	14421840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14419266_14421495
ES.34432.9	chr9	+	3763	6	NIC	ENSMUSG00000004096.10	novel	1111	7	NA	NA	25	9	intron_retention	FALSE	canonical	3	777	junction_1	60.6630035524124	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGACTTTTTTTTTTGGTT	NA	False	NA	22	True	ATTAAA	-22	NA	14411967	14421670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14419266_14421495
ES.34433.1	chr9	+	199	1	Intergenic	novelGene_28033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAACTTATCA	NA	False	NA	NA	False	NA	NA	NA	14565394	14565593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14565400_14565600
ES.34434.1	chr9	+	179	1	Intergenic	novelGene_28034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACTGTCTAGAAATTC	NA	False	NA	NA	False	NA	NA	NA	14583864	14584043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14583900_14584000
ES.34435.1	chr9	-	2311	2	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	11231	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTTTTACCTTCTTT	NA	False	NA	4	True	AATAAA	-20	NA	14459116	14453258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14454363_14457909
ES.34435.10	chr9	-	5025	2	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	11916	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTGGCTCCTCTTTTAC	NA	False	NA	-3	True	AATAAA	-13	NA	14458431	14453265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14454212_14454352
ES.34435.11	chr9	-	5780	2	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	11231	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTGGCTCCTCTTTTA	NA	False	NA	-4	True	AATAAA	-12	NA	14459116	14453266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14454297_14454366
ES.34435.13	chr9	-	2609	1	ISM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	68901	1531	12946	-1531	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	14457401	14454792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_14454800_14457400
ES.34435.14	chr9	-	5996	14	FSM	ENSMUSG00000013076.18	ENSMUST00000223132.2	3046	14	6	-2956	6	2669	multi-exon	FALSE	canonical	2	5	junction_13	3.45040946030859	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTTGGCCAGCATC	NA	False	NA	NA	False	AATAAA	-14	NA	14556346	14456131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215
ES.34435.15	chr9	-	3626	13	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	-19	192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4.42216638714053	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGTCACCTTCTTGG	NA	False	NA	NA	False	AATACA	-22	NA	14526321	14458608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505005_14507746_14507897_14526029
ES.34435.16	chr9	-	3555	15	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-18024	20	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	4.0082822418852	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCCCTTGTTCCCTTTGC	228	False	NA	NA	False	TATAAA	-30	NA	14574376	14458780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14574164
ES.34435.17	chr9	-	3271	14	NNC	ENSMUSG00000013076.18	novel	3274	14	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.06291774520133	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGCTGGGCCTTCCTTG	NA	False	NA	NA	False	TATAAA	-9	NA	14554826	14458801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505005_14507746_14507897_14545197_14545249_14554747
ES.34435.18	chr9	-	3404	14	NNC	ENSMUSG00000013076.18	novel	3274	14	NA	NA	-18025	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	4.24960840521019	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGAGCTGGGCCTTC	227	False	NA	NA	False	TATAAA	-5	NA	14574377	14458805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14574164
ES.34435.2	chr9	-	9028	14	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	8428	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.6085311180179	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCCTCTTTTACCTTC	NA	False	NA	1	True	AATAAA	-17	NA	14517454	14453261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505005_14507746_14507897_14516350_14516599_14517355
ES.34435.4	chr9	-	9028	18	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-32350	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.36359637649641	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCCTCTTTTACCTTC	7825	False	NA	1	True	AATAAA	-17	NA	14588702	14453261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14454127_14454218_14456463_14456960_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14587209_14587561_14588297
ES.34435.5	chr9	-	9097	15	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-18047	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	4.0082822418852	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCCTCTTTTACCTTC	205	False	NA	1	True	AATAAA	-17	NA	14574399	14453261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14574164
ES.34435.6	chr9	-	9050	14	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-18047	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.36148879791588	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCCTCTTTTACCTTC	205	False	NA	1	True	AATAAA	-17	NA	14574399	14453261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469750_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14556215_14556343_14574164
ES.34435.7	chr9	-	8981	13	FSM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	-27	3	-27	-3	multi-exon	FALSE	canonical	2	6	junction_12	3.15788255358274	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTCCTCTTTTACC	NA	False	NA	-2	True	AATAAA	-14	NA	14526329	14453264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14526029
ES.34435.8	chr9	-	4840	4	NNC	ENSMUSG00000013076.18	novel	8957	13	NA	NA	8502	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.84573486395988	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTCCTCTTTTACC	NA	False	NA	-2	True	AATAAA	-14	NA	14461845	14453264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14453515_14455038_14459195_14459826_14460103_14461687
ES.34435.9	chr9	-	9245	16	NNC	ENSMUSG00000013076.18	novel	3046	14	NA	NA	-31309	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.72816619373257	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTCCTCTTTTACC	8866	False	NA	-2	True	AATAAA	-14	NA	14587661	14453264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14455794_14455859_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14545197_14545249_14556215_14556343_14587209
ES.34436.1	chr9	-	3273	20	FSM	ENSMUSG00000036912.19	ENSMUST00000115644.10	3323	20	50	0	43	0	multi-exon	TRUE	canonical	0	0	junction_4	1.18157601687598	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTGTTTCTTGTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	14651986	14613073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14613771_14614320_14614469_14614885_14615015_14616201_14616356_14617504_14617576_14620157_14620262_14621207_14621409_14623565_14623639_14626138_14626324_14627023_14627136_14629531_14629650_14631332_14631457_14637160_14637273_14638624_14638823_14639939_14640021_14641170_14641293_14645738_14645954_14648105_14648238_14650686_14650751_14651753
ES.34437.1	chr9	-	173	1	Intergenic	novelGene_28035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAGCATGAAGT	NA	False	NA	NA	False	NA	NA	NA	14664211	14664038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_14664000_14664200
ES.34438.1	chr9	-	2412	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	1	-1376	1	5	multi-exon	FALSE	canonical	3	83	junction_2	53	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTCTTGTCAATATT	NA	False	NA	NA	False	NA	NA	NA	14695821	14690908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910_14694259_14695756
ES.34438.10	chr9	-	1323	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	40	-326	12	326	multi-exon	FALSE	canonical	3	83	junction_2	53	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTAGATGTTTTGTTT	NA	False	NA	NA	False	AAAAAG	-7	NA	14695782	14691958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910_14694259_14695756
ES.34438.11	chr9	-	1825	3	NNC	ENSMUSG00000031931.5	novel	2679	3	NA	NA	1	295	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	91	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTTTGTAAGTTTAAA	NA	False	NA	NA	False	ACTAAA	-14	NA	14695821	14691989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14692908_14693910_14694259_14695262
ES.34438.12	chr9	-	2647	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	-1544	650	-10	130	multi-exon	FALSE	canonical	3	189	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATCCCGTACCCTGGGT	NA	False	NA	NA	False	NA	NA	NA	14695804	14692154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910
ES.34438.13	chr9	-	2465	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	-1561	849	1	-69	multi-exon	FALSE	canonical	3	189	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTCTGTTGTGCGCAT	NA	False	NA	NA	False	NA	NA	NA	14695821	14692353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910
ES.34438.3	chr9	-	3736	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	-1559	-424	-1	2	multi-exon	FALSE	canonical	3	189	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCAGTGTTTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	14695819	14691080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910
ES.34438.4	chr9	-	2239	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	1	-1203	1	1	multi-exon	FALSE	canonical	3	83	junction_2	53	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCAGTGTTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	14695821	14691081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910_14694259_14695756
ES.34438.5	chr9	-	2206	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	304	169	-2	0	multi-exon	FALSE	canonical	3	72	junction_2	58.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14695848	14691082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14692908_14693910_14694259_14695815
ES.34438.6	chr9	-	1553	3	NNC	ENSMUSG00000031931.5	novel	1753	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14694260	14691082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_14691696_14692317_14692908_14693910
ES.34438.7	chr9	-	3201	2	FSM	ENSMUSG00000031931.5	ENSMUST00000214456.2	3207	2	6	0	6	0	multi-exon	FALSE	canonical	3	72	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14695840	14691082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14694259_14695815
ES.34438.8	chr9	-	4738	1	FSM	ENSMUSG00000031931.5	ENSMUST00000214882.2	1633	1	-27	-3078	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAACCAGTGTTTGTCTC	NA	False	NA	NA	False	NA	NA	NA	14695821	14691083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14691100_14695800
ES.34438.9	chr9	-	2457	3	NIC	ENSMUSG00000031931.5	novel	2679	3	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	86.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAACCAGTGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	14695821	14691084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_14692908_14693910_14694259_14695535
ES.34439.1	chr9	+	4071	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	-10	-775	-10	775	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGCTAGAGTATAAAAT	NA	False	NA	NA	False	AAAACA	-11	NA	14695939	14746717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.10	chr9	+	3314	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATCTCATTCCCTG	NA	False	NA	10	True	AATAAA	-28	NA	14695972	14745943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.11	chr9	+	5777	21	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	118.831340563001	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAACGTTTTTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	14695975	14748419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708342_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14724324_14724369_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.12	chr9	+	2547	19	NIC	ENSMUSG00000031928.16	novel	5660	19	NA	NA	4	-682	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	90.1722117826649	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695975	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.14	chr9	+	4053	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	7	746	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAGCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	14695978	14746688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.15	chr9	+	3356	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	31	-101	9	101	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATGACAACATGATGTT	NA	False	NA	110	True	GATAAA	-13	NA	14695980	14746043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.16	chr9	+	5628	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTTGAACGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	14695980	14748413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.17	chr9	+	5551	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	11	7	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	84.913336357477	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTTTGGTTTGAACAG	NA	False	NA	NA	False	AATAAA	-25	NA	14695982	14748426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.18	chr9	+	2716	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-12	-423	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	89.2231908069745	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACATTTTGGCTGTTTT	NA	False	NA	NA	False	TTTAAA	-23	NA	14695985	14745519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.19	chr9	+	2469	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-12	-683	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCCGTTGTTCATTTC	NA	False	NA	16	True	NA	NA	NA	14695985	14745259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.2	chr9	+	2612	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	-5	679	-5	-679	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTTGTTCATTTCTGCT	NA	False	NA	20	True	NA	NA	NA	14695944	14745263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.20	chr9	+	3430	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-12	-682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	84.0456609837409	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695985	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14735574_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.21	chr9	+	3244	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	36	6	-12	-6	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAGATAAATAATCTCA	NA	False	NA	3	True	AATAAA	-21	NA	14695985	14745936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.22	chr9	+	5829	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-11	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.3917850814537	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGGCATAAAGTGATAT	NA	False	NA	NA	False	NA	NA	NA	14695986	14748267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14713854_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.23	chr9	+	3676	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-10	-688	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_11	81.4734122122483	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAACCCCTCCGTTGTTC	NA	False	NA	11	True	NA	NA	NA	14695987	14745254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14724369_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.24	chr9	+	2313	18	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-10	-686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.53367047075	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCCGTTGTTCAT	NA	False	NA	13	True	NA	NA	NA	14695987	14745256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701887_14702030_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.25	chr9	+	2547	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-10	-682	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	83.5509697306757	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695987	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701887_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.28	chr9	+	3130	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAAGATAAATAATCT	NA	False	NA	1	True	AATAAA	-19	NA	14695999	14745934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.3	chr9	+	2554	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-5	-682	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.8097985439004	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695944	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14695999_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.32	chr9	+	5637	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	10	-5	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	85.2435870655527	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATTTTGAACGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	14696007	14748414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.33	chr9	+	3681	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	12	405	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAGTGAGGGGCTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	14696009	14746347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.34	chr9	+	2805	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	62	419	14	-419	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGGCTGTTTTGGTT	NA	False	NA	NA	False	TTTAAA	-27	NA	14696011	14745523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.35	chr9	+	2400	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	23	-679	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	88.6030299345358	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTTGTTCATTTCTGCT	NA	False	NA	20	True	NA	NA	NA	14696020	14745263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.36	chr9	+	5468	18	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	23	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	88.8528584223771	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTTTTTGGTTTGAACA	NA	False	NA	NA	False	AATAAA	-24	NA	14696020	14748425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.37	chr9	+	2623	21	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	23	-686	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	104.932359165321	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCCGTTGTTCAT	NA	False	NA	13	True	NA	NA	NA	14696020	14745256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14724324_14724369_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.38	chr9	+	2842	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	25	-421	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTTTGGCTGTTTTGG	NA	False	NA	NA	False	TTTAAA	-25	NA	14696022	14745521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.39	chr9	+	5550	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	31	-23	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	89.2231908069745	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGATTTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	14696028	14748396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.4	chr9	+	5567	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-3	-200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	84.0081449685245	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCTAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	14695946	14748219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736655_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.40	chr9	+	4319	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	79	-1112	31	1112	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGAAGTCTTGCAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	14696028	14747054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.42	chr9	+	2562	21	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	34	-686	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	102.399023432843	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCCGTTGTTCAT	NA	False	NA	13	True	NA	NA	NA	14696031	14745256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14724324_14724369_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.43	chr9	+	2466	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	34	-690	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.3403358254103	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAAACCCCTCCGTTGT	NA	False	NA	9	True	NA	NA	NA	14696031	14745252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.46	chr9	+	5845	21	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	43	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	107.198542434121	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTTGAACGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	14696040	14748413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14721657_14721787_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.47	chr9	+	2433	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	45	-810	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAACCTGGTTGTTATTG	NA	False	NA	-58	True	NA	NA	NA	14696042	14745132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.48	chr9	+	4249	21	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	45	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	85.6065856111549	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTTGAACGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	14696042	14748413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902_14745695_14747159
ES.34439.5	chr9	+	5778	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	-3	-2489	-3	12	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTGAACAGCTTGC	NA	False	NA	NA	False	AATAAA	-30	NA	14695946	14748431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.50	chr9	+	6525	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	46	806	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGGTCAGACTCAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	14696043	14749225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.52	chr9	+	2619	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	47	-682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.2255035163371	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14696044	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696164_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.53	chr9	+	5584	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	54	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.3403358254103	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAATAAAGATTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	14696051	14748390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.54	chr9	+	5339	19	NIC	ENSMUSG00000031928.16	novel	793	7	NA	NA	74	-191	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	89.2231908069745	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	14696071	14748228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.55	chr9	+	5940	20	NNC	ENSMUSG00000031928.16	novel	510	5	NA	NA	-115	-123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	102.525721385935	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCGGGTGTCTTTTTTG	NA	False	NA	NA	False	CATAAA	-17	NA	14696188	14748296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696592_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736655_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.56	chr9	+	2347	18	NNC	ENSMUSG00000031928.16	novel	510	5	NA	NA	3080	-686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.6096286469267	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCCTCCGTTGTTCAT	NA	False	NA	13	True	NA	NA	NA	14699383	14745256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14699466_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.58	chr9	+	2220	3	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	12253	2716	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	143.5	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	14720714	14725951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14721181_14723125_14723253_14724324
ES.34439.59	chr9	+	2761	1	Intergenic	novelGene_28037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGGCAATGTCAGT	NA	False	NA	NA	False	NA	NA	NA	14723260	14726021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14723300_14726000
ES.34439.6	chr9	+	5751	22	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-7	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	139.141553398279	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGAGCGGGTGTCTTTT	NA	False	NA	NA	False	CATAAA	-14	NA	14695964	14748293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702026_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14715060_14715150_14716651_14716824_14721099_14721181_14723125_14723253_14724324_14724369_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.60	chr9	+	4419	9	ISM	ENSMUSG00000031928.16	ENSMUST00000115632.10	5660	19	30423	6	17933	-6	3prime_fragment	FALSE	canonical	3	325	junction_3	18.5657614979833	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTTGAACGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	14726394	14748413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.61	chr9	+	3938	9	ISM	ENSMUSG00000031928.16	ENSMUST00000115632.10	5660	19	30510	400	18020	-400	3prime_fragment	FALSE	canonical	3	325	junction_3	18.5657614979833	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	14726481	14748019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.62	chr9	+	1769	8	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	32140	8	19628	-8	3prime_fragment	FALSE	canonical	3	325	junction_2	16.23676855354	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAAGATAAATAATCT	NA	False	NA	1	True	AATAAA	-19	NA	14728089	14745934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.63	chr9	+	2987	7	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	32694	682	20182	-682	3prime_fragment	FALSE	canonical	3	325	junction_1	16.1107279647928	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14728643	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.64	chr9	+	1818	3	NNC	ENSMUSG00000031928.16	novel	5660	19	NA	NA	35527	-192	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	14743988	14748227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14744013_14744902_14746572_14748102
ES.34439.65	chr9	+	1789	2	NNC	ENSMUSG00000031928.16	novel	5660	19	NA	NA	36637	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAACGTTTTTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	14745098	14748418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_14746639_14748169
ES.34439.7	chr9	+	2633	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-1	-682	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695970	14745260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.8	chr9	+	5801	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	-1	9	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTTGGTTTGAACAGCT	NA	False	NA	NA	False	AATAAA	-27	NA	14695970	14748428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.34439.9	chr9	+	5653	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	-138	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATTTCCCCAAACTGAG	NA	False	NA	NA	False	CATAAA	-2	NA	14695971	14748281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ES.3444.1	chr10	-	169	1	Intergenic	novelGene_2656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAGA	8451	False	NA	NA	False	NA	NA	NA	82762678	82762509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82762500_82762700
ES.34440.1	chr9	-	1335	1	Intergenic	novelGene_28036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14703655	14702320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_14702300_14703700
ES.34441.1	chr9	-	6067	11	Antisense	novelGene_ENSMUSG00000031928.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGACTCACTACTACCA	3237	False	NA	NA	False	NA	NA	NA	14748764	14721932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_14723248_14724320_14724367_14726461_14726566_14728089_14728264_14730709_14730773_14736434_14736652_14737828_14737911_14740649_14740710_14742190_14742263_14743940_14744011_14744900
ES.34441.2	chr9	-	1792	1	Antisense	novelGene_ENSMUSG00000031928.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	29	False	NA	NA	False	NA	NA	NA	14740664	14738872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_14738900_14740700
ES.34442.1	chr9	-	186	1	Intergenic	novelGene_28038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCTTAGG	2433	False	NA	NA	False	NA	NA	NA	14749568	14749382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_14749400_14749600
ES.34443.1	chr9	-	158	1	Intergenic	novelGene_28039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	14753115	14752957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_14753000_14753100
ES.34444.1	chr9	+	2387	4	FSM	ENSMUSG00000031932.15	ENSMUST00000034408.12	3586	4	-237	1436	-237	-957	multi-exon	FALSE	canonical	2	2	junction_2	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGTTAATATGCTGT	NA	False	NA	NA	False	NA	NA	NA	14771268	14780649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_14772217_14776067_14776194_14778144_14778279_14779470
ES.34445.1	chr9	-	183	1	Intergenic	novelGene_28040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATACTTAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	14790763	14790580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_14790600_14790800
ES.34446.1	chr9	+	136	1	Intergenic	novelGene_28041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6560	False	NA	NA	False	NA	NA	NA	14791298	14791434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14791300_14791400
ES.34447.1	chr9	+	2397	1	Intergenic	novelGene_28042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAAAGTGGCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	14951061	14953458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_14951100_14953500
ES.34448.1	chr9	-	5745	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-19	6	-19	-6	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGAGTTGTCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	14956793	14913429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
ES.34448.2	chr9	-	2145	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	-68	3655	-68	2	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTCTGTGCCCTTACT	NA	False	NA	-2	True	AATAAA	-23	NA	14956842	14917078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
ES.34448.4	chr9	-	1499	5	NIC	ENSMUSG00000031934.15	novel	5732	5	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	28.0223125384041	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGACACCCTCTGTGCC	NA	False	NA	-8	True	AATAAA	-17	NA	14955097	14917084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14955047
ES.34449.1	chr9	+	173	1	Intergenic	novelGene_28043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15060125	15060298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_15060100_15060300
ES.3445.1	chr10	+	1769	3	FSM	ENSMUSG00000034612.8	ENSMUST00000040110.8	5527	3	-24	3782	-24	-3782	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAGTTATTTAAACGT	9103	False	NA	NA	False	CATAAA	-15	NA	82821307	83027952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82821817_82927902_82927989_83026778
ES.3445.2	chr10	+	5514	3	NNC	ENSMUSG00000034612.8	novel	5527	3	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTCTGTGTGTGGAC	9132	False	NA	NA	False	ATTAAA	-28	NA	82821336	83031741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_82821802_82927902_82927989_83026778
ES.3445.3	chr10	+	5382	3	FSM	ENSMUSG00000034612.8	ENSMUST00000040110.8	5527	3	145	0	145	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAATCTGTTTTCTGTG	9272	False	NA	NA	False	ATTAAA	-21	NA	82821476	83031734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_82821817_82927902_82927989_83026778
ES.34450.1	chr9	+	175	1	Intergenic	novelGene_28044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTAAG	NA	False	NA	NA	False	NA	NA	NA	15102103	15102278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_15102100_15102300
ES.34451.1	chr9	-	178	1	Intergenic	novelGene_28045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCCCACAGA	NA	False	NA	NA	False	NA	NA	NA	15122765	15122587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_15122600_15122800
ES.34452.1	chr9	+	2347	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	-379	23	-379	-23	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	15149961	15170689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
ES.34452.2	chr9	+	1934	1	NIC	ENSMUSG00000031937.8	novel	1991	4	NA	NA	99	-18339	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTACAACATGTCC	NA	False	NA	NA	False	NA	NA	NA	15150439	15152373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15150400_15152400
ES.34452.3	chr9	+	3373	1	NIC	ENSMUSG00000031937.8	novel	1991	4	NA	NA	16976	-23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	15167316	15170689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15167300_15170700
ES.34453.1	chr9	-	3026	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	16	922	-12	734	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGCATGAAGTGAGGG	NA	False	NA	NA	False	AGTAAA	-17	NA	15191211	15172568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.11	chr9	-	2294	11	NNC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	-28	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	70.7644684852504	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15191255	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187147_15187362_15190845
ES.34453.13	chr9	-	5917	10	NIC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	26	131	intron_retention	FALSE	canonical	3	139	junction_5	14.7506015780232	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15191173	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15173735_15174899_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.14	chr9	-	3730	4	NNC	ENSMUSG00000031935.10	novel	820	4	NA	NA	1066	131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	90.0111104253247	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15180682	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15177547_15178574
ES.34453.16	chr9	-	4056	12	NNC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	-9	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.3521136311887	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCTCCCCAAGTA	NA	False	NA	-12	True	CATAAA	-10	NA	15191236	15173172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15177595_15177929_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.17	chr9	-	5873	8	NNC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	2290	-389	intron_retention	FALSE	canonical	0	0	junction_1	61.5347918843064	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCGTAACCAGTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	15188909	15173691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15177591_15177920_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185882_15187141_15187362_15188852
ES.34453.18	chr9	-	1541	1	NIC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	2667	4098	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	15179081	15177540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15177500_15179100
ES.34453.19	chr9	-	824	5	ISM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	5560	6933	-1501	3059	internal_fragment	FALSE	canonical	3	139	junction_4	18.9917745353087	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGTTTGCAAACACAAG	NA	False	NA	NA	False	TATAAA	-14	NA	15185667	15178579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580
ES.34453.2	chr9	-	2804	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	11	1149	11	507	multi-exon	FALSE	canonical	3	139	junction_7	15.3563726777577	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGACAACTCATGCCT	NA	False	NA	NA	False	TATAAA	-12	NA	15191216	15172795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.3	chr9	-	4079	11	NIC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	5	188	intron_retention	FALSE	canonical	3	139	junction_6	14.0014284985497	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGCTGCTCCTGCTGT	NA	False	NA	46	True	NA	NA	NA	15191222	15173114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15173735_15174899_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.4	chr9	-	2562	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	-112	1514	-112	142	multi-exon	FALSE	canonical	3	139	junction_7	15.3563726777577	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTATTTTGTGAATTT	NA	False	NA	0	True	CATAAA	-22	NA	15191339	15173160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.5	chr9	-	2412	12	NNC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	33	138	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	52.2206064263638	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAAGTATTTTGTGA	NA	False	NA	-4	True	CATAAA	-18	NA	15191166	15173164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182879_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.6	chr9	-	3492	4	NNC	ENSMUSG00000031935.10	novel	820	4	NA	NA	2002	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.0111104253247	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15179746	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15177591_15177920
ES.34453.8	chr9	-	2192	11	NNC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	6	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.5916660306315	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15191221	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15173735_15174899_15175060_15176647_15176766_15181741_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ES.34453.9	chr9	-	2833	1	NIC	ENSMUSG00000031935.10	novel	3964	12	NA	NA	5744	131	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTCCCCAAGTAT	NA	False	NA	-11	True	CATAAA	-11	NA	15176004	15173171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15173200_15176000
ES.34454.1	chr9	+	1286	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	-70	0	-24	0	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9048	False	NA	-1	True	NA	NA	NA	15217485	15228266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.10	chr9	+	1469	7	NNC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	15	1	intron_retention	FALSE	canonical	1	1	junction_2	242.592021486464	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAAGTGCTTAGCCC	9087	False	NA	6	True	AATAAA	-17	NA	15217524	15223401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218168_15218291_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.11	chr9	+	3612	10	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	16	0	intron_retention	FALSE	canonical	2	3	junction_1	186.889813711544	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9088	False	NA	-1	True	NA	NA	NA	15217525	15228266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218942_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678
ES.34454.12	chr9	+	4768	7	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	17	0	intron_retention	FALSE	canonical	3	223	junction_6	139.975493886926	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	9089	False	NA	5	True	NA	NA	NA	15217526	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15226737_15228184
ES.34454.13	chr9	+	1197	7	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	198.555407884046	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACTAATGATAA	9089	False	NA	-20	True	ATTAAA	-21	NA	15217526	15223375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
ES.34454.14	chr9	+	3734	9	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	229	junction_6	144.398699353561	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	9089	False	NA	5	True	NA	NA	NA	15217526	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15226428_15226678
ES.34454.15	chr9	+	1399	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-13	910	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	184.899567333188	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACATTTGTCTGTTACA	9093	False	NA	NA	False	NA	NA	NA	15217530	15226607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397
ES.34454.16	chr9	+	1315	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-4	-306	0	0	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9118	False	NA	5	True	AATAAA	-16	NA	15217555	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.17	chr9	+	2594	13	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_12	192.044030686252	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9118	False	NA	-24	True	NA	NA	NA	15217555	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15227239_15227403
ES.34454.18	chr9	+	1347	13	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	190.88929310525	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9118	False	NA	-24	True	NA	NA	NA	15217555	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226773_15228184
ES.34454.19	chr9	+	4555	9	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	-1	intron_retention	FALSE	canonical	2	14	junction_1	209.706901114389	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9118	False	NA	4	True	NA	NA	NA	15217555	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218218_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15226428_15226678_15226737_15228184
ES.34454.2	chr9	+	2078	11	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_8	181.101628926965	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9065	False	NA	-24	True	NA	NA	NA	15217502	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225324_15225526_15226428_15226678_15226737_15228184
ES.34454.20	chr9	+	2525	13	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	35198	intron_retention	TRUE	non_canonical	0	0	junction_11	191.503916409038	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAGAACTCAGGACTGTT	9118	False	NA	NA	False	AATAAA	-8	NA	15217555	15263485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15227239_15227403_15228273_15263465
ES.34454.21	chr9	+	1391	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	217	junction_8	148.535551300017	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9118	False	NA	-24	True	NA	NA	NA	15217555	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.22	chr9	+	1229	12	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	173.277639918911	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9118	False	NA	-24	True	NA	NA	NA	15217555	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226773_15228184
ES.34454.23	chr9	+	3452	10	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	217	junction_7	148.720302565123	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9118	False	NA	4	True	NA	NA	NA	15217555	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.24	chr9	+	2431	5	ISM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	47	0	1	0	intron_retention	FALSE	canonical	3	288	junction_1	111.666915422608	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9119	False	NA	5	True	AATAAA	-16	NA	15217556	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653
ES.34454.25	chr9	+	1101	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	47	0	1	0	multi-exon	FALSE	canonical	3	55	junction_6	190.157317912184	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9119	False	NA	5	True	AATAAA	-16	NA	15217556	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ES.34454.26	chr9	+	3565	10	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_9	186.796978324359	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15227322_15227484
ES.34454.27	chr9	+	1566	2	NNC	ENSMUSG00000031939.17	novel	491	2	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15218381_15227501
ES.34454.28	chr9	+	3671	9	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	223	junction_8	152.275859872798	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15226428_15226678_15226737_15228184
ES.34454.29	chr9	+	4136	8	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	223	junction_7	154.812328781842	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15226737_15228184
ES.34454.3	chr9	+	344	3	ISM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-52	3096	-2	-31	5prime_fragment	FALSE	canonical	3	288	junction_1	109	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACGGAAAAA	9070	False	NA	-6	True	TTTAAA	-20	NA	15217507	15219998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_15217580_15219023_15219118_15219820
ES.34454.30	chr9	+	2395	12	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	199.572766820021	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223468_15223519_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.31	chr9	+	5945	7	NIC	ENSMUSG00000031939.17	novel	2339	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	229	junction_5	140.595657432543	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15222992_15224069_15226428_15226678
ES.34454.32	chr9	+	3628	11	NNC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	208.009038265168	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15226428_15226678_15227239_15227403
ES.34454.33	chr9	+	3816	10	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_1	190.050155823128	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9119	False	NA	-1	True	NA	NA	NA	15217556	15228266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15226428_15226678
ES.34454.34	chr9	+	3345	11	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_10	179.03644880303	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9119	False	NA	7	True	NA	NA	NA	15217556	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15227213_15227375
ES.34454.35	chr9	+	4975	9	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_1	198.747327026051	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	9119	False	NA	5	True	NA	NA	NA	15217556	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15226428_15226678
ES.34454.37	chr9	+	4458	8	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	223	junction_7	143.607458165711	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15226428_15226678_15226737_15228184
ES.34454.38	chr9	+	3433	9	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	223	junction_8	150.508305418671	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9119	False	NA	-24	True	NA	NA	NA	15217556	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15226737_15228184
ES.34454.39	chr9	+	1360	13	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	171.959055204042	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTCTGGAGTTTCT	9119	False	NA	26	True	NA	NA	NA	15217556	15228293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.4	chr9	+	2193	12	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	69	junction_1	176.794833700367	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9073	False	NA	-24	True	NA	NA	NA	15217510	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15226737_15228184
ES.34454.40	chr9	+	3623	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	69	junction_1	182.210318039347	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9119	False	NA	4	True	NA	NA	NA	15217556	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678
ES.34454.41	chr9	+	5739	8	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	258	junction_6	136.994115768167	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9119	False	NA	7	True	NA	NA	NA	15217556	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15225329_15225526_15226428_15226678
ES.34454.42	chr9	+	3775	12	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	200.127603921197	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	9119	False	NA	5	True	NA	NA	NA	15217556	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15227239_15227403
ES.34454.43	chr9	+	7404	6	Fusion	ENSMUSG00000031939.17_ENSMUSG00000065226.3_ENSMUSG00000064634.3_ENSMUSG00000065663.3	novel	1005	6	NA	NA	1	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	237.471682522359	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9119	False	NA	4	True	NA	NA	NA	15217556	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15221706_15222822_15227187_15227351
ES.34454.44	chr9	+	2668	11	ISM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	1	-5	1	-1	intron_retention	FALSE	canonical	3	217	junction_9	145.489381055801	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9119	False	NA	4	True	NA	NA	NA	15217556	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678
ES.34454.45	chr9	+	4856	8	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	229	junction_6	142.420762072767	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9119	False	NA	4	True	NA	NA	NA	15217556	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15226428_15226678
ES.34454.46	chr9	+	2671	11	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_10	181.514296957568	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225561_15226397_15226428_15226678_15227239_15227403
ES.34454.47	chr9	+	3824	10	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_9	188.794878566235	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225561_15226397_15226428_15226678_15227239_15227403
ES.34454.48	chr9	+	5650	6	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	223	junction_5	147.957561483014	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15221331_15221653_15221706_15222822_15226737_15228184
ES.34454.49	chr9	+	3311	11	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_10	179.03644880303	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15227358_15227521
ES.34454.5	chr9	+	5124	7	ISM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	-44	23	2	0	intron_retention	FALSE	canonical	3	229	junction_6	138.37077806467	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9074	False	NA	-24	True	NA	NA	NA	15217511	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069
ES.34454.50	chr9	+	1003	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	-1	3	-1	-3	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCGTTGCTTGATTTC	9121	False	NA	NA	False	AATAAA	-14	NA	15217558	15223091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.51	chr9	+	6802	8	NNC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_7	231.020009734999	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15221331_15221653_15221706_15222822_15226428_15226678_15227322_15227484
ES.34454.52	chr9	+	1142	8	NNC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	243.586803033836	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACTAATGATAA	9121	False	NA	-20	True	ATTAAA	-21	NA	15217558	15223375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218218_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ES.34454.53	chr9	+	8373	4	Fusion	ENSMUSG00000031939.17_ENSMUSG00000065226.3_ENSMUSG00000064634.3_ENSMUSG00000065663.3	novel	1005	6	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	207.231486239154	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_15217580_15219023_15219118_15219820_15227239_15227403
ES.34454.54	chr9	+	4933	9	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_8	194.663451564489	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9121	False	NA	7	True	NA	NA	NA	15217558	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15225561_15226397_15226428_15226678_15227284_15227448
ES.34454.55	chr9	+	3527	10	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	69	junction_1	192.054647572822	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9121	False	NA	7	True	NA	NA	NA	15217558	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15226428_15226678_15226737_15228184
ES.34454.56	chr9	+	3538	10	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_9	186.022765100948	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9121	False	NA	4	True	NA	NA	NA	15217558	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15226428_15226678_15227322_15227484
ES.34454.57	chr9	+	4042	9	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	69	junction_1	199.670979363552	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9121	False	NA	-24	True	NA	NA	NA	15217558	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285
ES.34454.58	chr9	+	1221	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	233.748163803767	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGCTTAGCCCAAA	9121	False	NA	9	True	AATAAA	-20	NA	15217558	15223404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ES.34454.59	chr9	+	1393	6	NNC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_1	218.521394833549	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9121	False	NA	5	True	AATAAA	-16	NA	15217558	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15218942_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.6	chr9	+	2425	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	2	4	intron_retention	FALSE	canonical	3	217	junction_8	148.387634255689	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTTTGTATGTATTTT	9074	False	NA	11	True	NA	NA	NA	15217511	15228278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.60	chr9	+	2497	12	NNC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	174.840375842634	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9122	False	NA	-1	True	NA	NA	NA	15217559	15228266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15227322_15227484
ES.34454.61	chr9	+	3656	8	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	223	junction_7	150.703926522794	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	9123	False	NA	5	True	NA	NA	NA	15217560	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15226737_15228184
ES.34454.62	chr9	+	3822	10	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	6	0	intron_retention	FALSE	canonical	3	12	junction_1	185.015381409289	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9128	False	NA	-24	True	NA	NA	NA	15217565	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217934_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678
ES.34454.63	chr9	+	1702	6	NIC	ENSMUSG00000031939.17	novel	1005	6	NA	NA	9	-1	intron_retention	FALSE	canonical	3	104	junction_1	178.466131240636	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGTTGCTTGATTTCAG	9131	False	NA	NA	False	AATAAA	-16	NA	15217568	15223093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.64	chr9	+	1655	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	9	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	250.612799972795	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGTGCTTAGCCCAA	9131	False	NA	8	True	AATAAA	-19	NA	15217568	15223403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217934_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
ES.34454.65	chr9	+	2687	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	12	junction_1	182.291003617842	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9131	False	NA	-24	True	NA	NA	NA	15217568	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217934_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.66	chr9	+	2763	12	NIC	ENSMUSG00000031939.17	novel	1210	11	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	188.319273470164	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9173	False	NA	-24	True	NA	NA	NA	15217610	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217934_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34454.67	chr9	+	4571	8	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	104	junction_1	179.470195354015	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9181	False	NA	-24	True	NA	NA	NA	15217618	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285
ES.34454.68	chr9	+	4624	2	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	209	0	intron_retention	FALSE	canonical	3	531	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	9396	False	NA	5	True	AATAAA	-16	NA	15217833	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15220212_15221154
ES.34454.69	chr9	+	3361	11	NNC	ENSMUSG00000031939.17	novel	1210	11	NA	NA	592	0	intron_retention	FALSE	non_canonical	0	0	junction_10	193.203234962565	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	9779	False	NA	-24	True	NA	NA	NA	15218216	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15227213_15227375
ES.34454.7	chr9	+	3456	9	NIC	ENSMUSG00000031939.17	novel	3126	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	223	junction_8	148.94944612183	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9074	False	NA	7	True	NA	NA	NA	15217511	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15226428_15226678_15226737_15228184
ES.34454.70	chr9	+	1654	1	FSM	ENSMUSG00000031939.17	ENSMUST00000216256.2	1702	1	789	-741	-677	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAACGGAAAAA	9907	False	NA	-6	True	TTTAAA	-20	NA	15218344	15219998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15218300_15220000
ES.34454.71	chr9	+	5088	6	ISM	ENSMUSG00000031939.17	ENSMUST00000216825.2	1210	11	-19	-8	1	0	intron_retention	FALSE	canonical	3	229	junction_5	129.190402120281	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	NA	False	NA	7	True	NA	NA	NA	15219022	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069
ES.34454.72	chr9	+	4752	7	NNC	ENSMUSG00000031939.17	novel	4881	8	NA	NA	777	0	intron_retention	FALSE	canonical	1	11	junction_1	199.911160824558	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	NA	False	NA	-24	True	NA	NA	NA	15219818	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15220212_15221158_15221331_15221653_15221706_15222822_15225329_15225526_15225561_15226397_15226428_15226678
ES.34454.73	chr9	+	5455	6	NNC	ENSMUSG00000031939.17	novel	4881	8	NA	NA	972	0	intron_retention	FALSE	non_canonical	0	0	junction_5	224.767079440028	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTTATAGTTTGTATG	NA	False	NA	5	True	NA	NA	NA	15220013	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15220212_15221154_15221331_15221653_15221706_15222822_15226428_15226678_15227273_15227442
ES.34454.74	chr9	+	4354	7	NNC	ENSMUSG00000031939.17	novel	1210	11	NA	NA	1052	-1	intron_retention	FALSE	canonical	0	0	junction_6	214.787297886382	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	NA	False	NA	4	True	NA	NA	NA	15220093	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15227239_15227403
ES.34454.75	chr9	+	3110	1	FSM	ENSMUSG00000031939.17	ENSMUST00000214899.2	1717	1	-1366	-27	-905	0	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTAAGTGCTTAGCC	NA	False	NA	5	True	AATAAA	-16	NA	15220290	15223400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15220300_15223400
ES.34454.76	chr9	+	234	1	FSM	ENSMUSG00000031939.17	ENSMUST00000214899.2	1717	1	534	949	534	-670	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAAGAAGC	NA	False	NA	NA	False	AAAACA	-38	NA	15222190	15222424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15222200_15222400
ES.34454.77	chr9	+	4512	3	NNC	ENSMUSG00000031939.17	novel	4881	8	NA	NA	421	0	intron_retention	FALSE	canonical	0	0	junction_2	136	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	NA	False	NA	7	True	NA	NA	NA	15223346	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15226428_15226678_15227239_15227403
ES.34454.78	chr9	+	4276	1	FSM	ENSMUSG00000065226.3	ENSMUST00000083292.3	137	1	-2142	-1997	-2142	1997	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	NA	False	NA	7	True	NA	NA	NA	15223998	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15224000_15228300
ES.34454.79	chr9	+	2076	4	NIC	ENSMUSG00000031939.17	novel	2339	11	NA	NA	174	0	intron_retention	FALSE	canonical	3	223	junction_3	20.6074420214316	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATATAC	NA	False	NA	-24	True	NA	NA	NA	15224270	15228243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15225329_15225526_15226428_15226678_15226737_15228184
ES.34454.8	chr9	+	1167	7	NIC	ENSMUSG00000031939.17	novel	1005	6	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	217.881275010038	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCGTTGCTTGATTTC	9075	False	NA	NA	False	AATAAA	-14	NA	15217512	15223091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ES.34454.80	chr9	+	1122	2	Fusion	ENSMUSG00000064797.3_ENSMUSG00000031939.17	novel	491	2	NA	NA	2	-138	multi-exon	TRUE	non_canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAATCACTTAACATACA	NA	False	NA	NA	False	NA	NA	NA	15226819	15228105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_15227228_15227391
ES.34454.81	chr9	+	637	1	Antisense	novelGene_ENSMUSG00000046111.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCCACAAGTATTTAA	NA	False	NA	NA	False	NA	NA	NA	15251747	15252384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_15251700_15252400
ES.34454.9	chr9	+	2534	12	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	4	-1	intron_retention	FALSE	canonical	3	69	junction_1	178.558090647098	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTTTATAGTTTGTAT	9076	False	NA	4	True	NA	NA	NA	15217513	15228271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ES.34455.1	chr9	-	2670	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	-19	-1	-19	-1	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTCTTTTCTTTCA	NA	False	NA	-6	True	AATAAA	-16	NA	15217482	15194633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
ES.34455.2	chr9	-	4787	7	NIC	ENSMUSG00000031938.16	novel	2562	8	NA	NA	97	0	intron_retention	FALSE	canonical	3	17	junction_5	3.51188458428425	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTCTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	15212713	15194634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662
ES.34455.4	chr9	-	2495	8	NNC	ENSMUSG00000031938.16	novel	2756	9	NA	NA	-1424	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	8.91227083456127	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTGTTTTTTTTTTCTT	NA	False	NA	-14	True	AATAAA	-8	NA	15214276	15194641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15209138_15209238_15212662_15212810_15214219
ES.34455.5	chr9	-	1753	1	FSM	ENSMUSG00000031938.16	ENSMUST00000216077.2	2163	1	410	0	410	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	15200454	15198701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15198700_15200500
ES.34455.6	chr9	-	876	8	NNC	ENSMUSG00000031938.16	novel	2650	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.95907901553378	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	15217437	15198701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212707_15212810_15217332
ES.34455.7	chr9	-	1149	8	ISM	ENSMUSG00000031938.16	ENSMUST00000180339.8	2756	9	-98	4069	-98	0	5prime_fragment	FALSE	canonical	0	0	junction_7	8.03563492024299	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	15217842	15198701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217509
ES.34455.8	chr9	-	218	1	Intergenic	novelGene_28046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTAAATGTCAAATATAG	NA	False	NA	NA	False	NA	NA	NA	15213608	15213390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_15213400_15213600
ES.34456.1	chr9	-	7661	28	FSM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	-49	-7	-49	2	multi-exon	TRUE	canonical	3	110	junction_2	25.4723282440542	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGCTGTCCATCCAGG	9658	False	NA	2	True	AATAAA	-19	NA	15269133	15228208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.10	chr9	-	7465	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	122	1	intron_retention	FALSE	canonical	3	9	junction_22	38.2231194267365	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9829	False	NA	1	True	AATAAA	-18	NA	15268962	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.100	chr9	-	5832	19	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	117	-915	intron_retention	FALSE	canonical	1	4	junction_13	40.2186922944611	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGAGCATCAGAAGGC	9824	False	NA	NA	False	AATAGA	-19	NA	15268967	15237815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.101	chr9	-	3436	8	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	4417	intron_retention	FALSE	canonical	3	9	junction_2	48.5529376567684	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGGTGTTCCTAGT	9764	False	NA	NA	False	AATATA	-18	NA	15269027	15250351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.102	chr9	-	1190	8	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	57	24232	57	2144	5prime_fragment	FALSE	canonical	3	124	junction_5	14.2699913476226	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAGAAATTTTTTTTT	9764	False	NA	NA	False	TATAAA	-18	NA	15269027	15252624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.103	chr9	-	3122	6	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	-18	27550	-18	15	5prime_fragment	FALSE	canonical	3	124	junction_3	15.4064921380566	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTAATATCTTTGAATA	9689	False	NA	NA	False	NA	NA	NA	15269102	15255942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.104	chr9	-	4159	5	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	28	15	intron_retention	FALSE	canonical	3	132	junction_2	13.6473440639562	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTAATATCTTTGAATA	9735	False	NA	NA	False	NA	NA	NA	15269056	15255942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15258333_15262106_15262201_15262986_15264396_15265901_15266033_15268921
ES.34456.105	chr9	-	3769	5	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	121	15	intron_retention	FALSE	canonical	3	124	junction_2	16.1322658049017	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTAATATCTTTGAATA	9828	False	NA	NA	False	NA	NA	NA	15268963	15255942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15258333_15262106_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.106	chr9	-	7860	3	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	-3	15	intron_retention	FALSE	canonical	0	0	junction_1	79.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTAATATCTTTGAATA	9704	False	NA	NA	False	NA	NA	NA	15269087	15255942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15258333_15260728_15266033_15268921
ES.34456.107	chr9	-	476	4	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	106	34632	106	-5145	5prime_fragment	FALSE	canonical	3	124	junction_1	14.522013940528	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAAAGAAATGTT	9813	False	NA	NA	False	CATAAA	-19	NA	15268978	15263024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.11	chr9	-	7747	25	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	117	0	intron_retention	FALSE	canonical	0	0	junction_20	64.6786796187292	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	NA	False	NA	0	True	AATAAA	-17	NA	15262994	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15254710_15254854_15255166_15255228_15255419_15255557_15258236_15258333_15262106
ES.34456.12	chr9	-	7656	29	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	55	0	intron_retention	FALSE	canonical	2	5	junction_26	45.8028578334833	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9762	False	NA	0	True	AATAAA	-17	NA	15269029	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.14	chr9	-	6509	28	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	45	0	intron_retention	FALSE	canonical	2	5	junction_13	37.3820596188106	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9752	False	NA	0	True	AATAAA	-17	NA	15269039	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.18	chr9	-	7433	27	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	55	0	intron_retention	FALSE	canonical	1	1	junction_22	48.2660434129996	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9762	False	NA	0	True	AATAAA	-17	NA	15269029	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258263_15258333_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.19	chr9	-	3589	9	NIC	ENSMUSG00000046111.19	novel	4144	13	NA	NA	1169	0	intron_retention	FALSE	canonical	3	114	junction_2	26.2080021176739	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	NA	False	NA	0	True	AATAAA	-17	NA	15242105	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15229064_15229214_15229353_15233795_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049
ES.34456.2	chr9	-	7692	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	-63	1	intron_retention	FALSE	canonical	0	0	junction_19	37.9076200033844	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9644	False	NA	1	True	AATAAA	-18	NA	15269147	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249734_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.20	chr9	-	7532	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	60	0	intron_retention	FALSE	non_canonical	0	0	junction_20	39.3232183408972	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9767	False	NA	0	True	AATAAA	-17	NA	15269024	15228210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252757_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.21	chr9	-	7594	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	35	0	intron_retention	FALSE	canonical	0	0	junction_4	39.1499526547216	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTTTGCTGTCCATC	9742	False	NA	-2	True	AATAAA	-15	NA	15269049	15228212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229371_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.22	chr9	-	7745	26	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	0	intron_retention	FALSE	canonical	1	4	junction_20	43.3595940940411	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTTTGCTGTCCATC	9764	False	NA	-2	True	AATAAA	-15	NA	15269027	15228212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.23	chr9	-	5865	12	NIC	ENSMUSG00000046111.19	novel	3984	13	NA	NA	-1536	0	intron_retention	FALSE	canonical	3	114	junction_2	27.7566163655824	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTTTGCTGTCCATC	NA	False	NA	-2	True	AATAAA	-15	NA	15246331	15228212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231
ES.34456.25	chr9	-	7520	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	40	1	intron_retention	FALSE	non_canonical	0	0	junction_5	51.1477592711904	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTCCTTTGCTGTCCA	9747	False	NA	-4	True	AATAAA	-13	NA	15269044	15228214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234862_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252757_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.26	chr9	-	7166	26	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	0	intron_retention	FALSE	canonical	2	7	junction_5	41.1559764797289	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTCCTTTGCTGTCC	9764	False	NA	-5	True	AATAAA	-12	NA	15269027	15228215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.27	chr9	-	7199	26	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	-1	intron_retention	FALSE	canonical	0	0	junction_18	43.708745120399	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGATTCCTTTGCTGTC	9764	False	NA	-6	True	AATAAA	-11	NA	15269027	15228216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.29	chr9	-	7163	26	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	-1	intron_retention	FALSE	canonical	2	4	junction_10	42.5930698588397	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGATTCCTTTGCTGTC	9764	False	NA	-6	True	AATAAA	-11	NA	15269027	15228216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.3	chr9	-	6562	21	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	-3073	1	intron_retention	FALSE	canonical	2	7	junction_5	39.9676118876272	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	NA	False	NA	1	True	AATAAA	-18	NA	15255463	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419
ES.34456.30	chr9	-	7587	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	28	-2	intron_retention	FALSE	canonical	2	11	junction_11	37.7199266560927	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGATTCCTTTGCTGT	9735	False	NA	-7	True	AATAAA	-10	NA	15269056	15228217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.32	chr9	-	7219	27	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	60	9	intron_retention	FALSE	canonical	0	0	junction_5	48.9813392797005	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTACTGTATATATTTA	9767	False	NA	-62	True	TATAAA	-6	NA	15269024	15228272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234862_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.33	chr9	-	7492	28	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	7	intron_retention	FALSE	canonical	0	0	junction_11	39.1659267945178	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTACTGTATATATT	9764	False	NA	-64	True	AATAAA	-45	NA	15269027	15228274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239239_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.35	chr9	-	7307	27	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	75	5	intron_retention	FALSE	canonical	0	0	junction_1	46.2352007347459	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTTTTACTGTATATA	9782	False	NA	-66	True	AATAAA	-43	NA	15269009	15228276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.36	chr9	-	4396	28	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	34	5	combination_of_known_splicesites	TRUE	canonical	2	8	junction_13	36.9690487085381	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTTTTACTGTATATA	9741	False	NA	-66	True	AATAAA	-43	NA	15269050	15228276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15246345_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.37	chr9	-	7581	29	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	88	1	intron_retention	FALSE	canonical	0	0	junction_22	52.530008430556	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTTCTTTTTACTGTA	9795	False	NA	-70	True	AATAAA	-39	NA	15268996	15228280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255589_15258236_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.38	chr9	-	9113	20	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	4479	1	intron_retention	FALSE	canonical	3	46	junction_7	38.9783660431089	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTTCTTTTTACTGTA	NA	False	NA	-70	True	AATAAA	-39	NA	15257721	15228280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252921_15255419
ES.34456.4	chr9	-	7750	29	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	122	1	intron_retention	FALSE	canonical	0	0	junction_2	66.9052311032522	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9829	False	NA	1	True	AATAAA	-18	NA	15268962	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228881_15228969_15229064_15229214_15229353_15233795_15234380_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15254710_15254854_15254963_15255228_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.40	chr9	-	6444	21	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	-443	-21	intron_retention	FALSE	canonical	0	0	junction_12	44.705564530604	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAAAATACATACAAACT	NA	False	NA	-92	True	AATAAA	-17	NA	15252833	15228302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242088_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736
ES.34456.41	chr9	-	3850	1	NIC	ENSMUSG00000046111.19	novel	4144	13	NA	NA	-3016	9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCTTCAGGGCACTAAT	NA	False	NA	NA	False	AATAAA	-26	NA	15232325	15228475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15228500_15232300
ES.34456.42	chr9	-	6536	20	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	13628	83	-3066	9	internal_fragment	FALSE	canonical	3	46	junction_6	36.8310509731867	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCTTCAGGGCACTAAT	NA	False	NA	NA	False	AATAAA	-26	NA	15255456	15228475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419
ES.34456.43	chr9	-	10041	23	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	34	-2054	intron_retention	FALSE	canonical	2	7	junction_1	37.2696506490755	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTTCTTGTCTTA	9741	False	NA	NA	False	ATTAAA	-18	NA	15269050	15230622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.44	chr9	-	10005	23	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	-25	-2054	intron_retention	FALSE	canonical	3	46	junction_3	35.5783386601761	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTTCTTGTCTTA	9682	False	NA	NA	False	ATTAAA	-18	NA	15269109	15230622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.45	chr9	-	3404	2	NNC	ENSMUSG00000046111.19	novel	6154	3	NA	NA	1179	-2056	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGGGTCTTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	15234379	15230624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15231222_15231572
ES.34456.46	chr9	-	9607	21	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	89	-2056	intron_retention	FALSE	canonical	3	9	junction_18	42.1400937350642	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGGGTCTTCTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	15263022	15230624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986
ES.34456.47	chr9	-	10153	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	74	-2057	intron_retention	FALSE	non_canonical	0	0	junction_3	49.4200391000481	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGGGTCTTCTTGTC	9781	False	NA	NA	False	ATTAAA	-15	NA	15269010	15230625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235589_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.48	chr9	-	8840	23	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	26	3341	26	2561	5prime_fragment	FALSE	canonical	3	46	junction_3	33.1414449277763	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGGTGTACTGTGGGTA	9733	False	NA	NA	False	AATAAA	-24	NA	15269058	15231733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.49	chr9	-	9049	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	2558	intron_retention	FALSE	canonical	3	87	junction_2	27.1516082372237	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTAGGGGTGTACTGTGG	9764	False	NA	NA	False	AATAAA	-21	NA	15269027	15231736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.5	chr9	-	7630	27	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	1	intron_retention	FALSE	canonical	2	4	junction_2	37.3286420164583	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9764	False	NA	1	True	AATAAA	-18	NA	15269027	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15229060_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.50	chr9	-	8661	24	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	5	3958	5	2121	5prime_fragment	FALSE	canonical	3	121	junction_16	23.6825252830166	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATATAAATAATTAAGT	9712	False	NA	NA	False	AATAAA	-16	NA	15269079	15232173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.51	chr9	-	8114	23	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	6	1800	intron_retention	FALSE	canonical	2	6	junction_14	38.3550184202345	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGGTAATTATTTTG	9713	False	NA	NA	False	AATAAA	-18	NA	15269078	15232494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.52	chr9	-	8028	23	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	56	1800	intron_retention	FALSE	non_canonical	0	0	junction_15	45.4379287809296	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGGTAATTATTTTG	9763	False	NA	NA	False	AATAAA	-18	NA	15269028	15232494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252757_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.54	chr9	-	12487	21	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	78	1799	intron_retention	FALSE	canonical	3	87	junction_2	26.4168506828501	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9785	False	NA	NA	False	AATAAA	-17	NA	15269006	15232495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252921_15255419_15258333_15262106_15262201_15262986_15264396_15265901_15266033_15268921
ES.34456.55	chr9	-	8305	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	36	1799	intron_retention	FALSE	canonical	0	0	junction_3	41.3642129097222	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9743	False	NA	NA	False	AATAAA	-17	NA	15269048	15232495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235582_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.56	chr9	-	7504	24	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	120	1799	intron_retention	FALSE	canonical	3	46	junction_3	37.7710243911106	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9827	False	NA	NA	False	AATAAA	-17	NA	15268964	15232495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15243808_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.58	chr9	-	7664	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	56	1799	intron_retention	FALSE	canonical	2	4	junction_7	42.5192050458563	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9763	False	NA	NA	False	AATAAA	-17	NA	15269028	15232495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15242049_15242207_15243231_15243808_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.59	chr9	-	8312	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	35	1799	intron_retention	FALSE	canonical	3	87	junction_2	27.1516082372237	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9742	False	NA	NA	False	AATAAA	-17	NA	15269049	15232495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.6	chr9	-	7411	27	FSM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	-40	-183	-40	1	multi-exon	FALSE	canonical	3	46	junction_7	32.7214575925683	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9667	False	NA	1	True	AATAAA	-18	NA	15269124	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.60	chr9	-	7952	22	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	1798	intron_retention	FALSE	canonical	1	1	junction_18	46.4000645085172	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9764	False	NA	NA	False	AATAAA	-16	NA	15269027	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.61	chr9	-	8368	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	-49	1798	intron_retention	FALSE	canonical	3	9	junction_18	39.7754567104105	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9658	False	NA	NA	False	AATAAA	-16	NA	15269133	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.62	chr9	-	8072	23	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	1798	intron_retention	FALSE	canonical	0	0	junction_1	61.90129773403	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9764	False	NA	NA	False	AATAAA	-16	NA	15269027	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.63	chr9	-	7233	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	1798	intron_retention	FALSE	canonical	2	5	junction_9	40.627125507869	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9764	False	NA	NA	False	AATAAA	-16	NA	15269027	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.64	chr9	-	5114	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	115	1798	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	38.2254777021512	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9822	False	NA	NA	False	AATAAA	-16	NA	15268969	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15246345_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.66	chr9	-	12524	18	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	1798	intron_retention	FALSE	canonical	1	4	junction_13	42.0740819709999	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGTGGGTAATTATTT	9764	False	NA	NA	False	AATAAA	-16	NA	15269027	15232496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15239248_15241800_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15264396_15265901_15266033_15268921
ES.34456.68	chr9	-	8049	23	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	56	1797	intron_retention	FALSE	canonical	3	46	junction_3	35.5783386601761	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGGTAATTATT	9763	False	NA	NA	False	AATAAA	-15	NA	15269028	15232497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.7	chr9	-	7427	27	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	-47	1	intron_retention	FALSE	canonical	2	11	junction_10	41.3776981636901	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGCTGTCCATCCAG	9660	False	NA	1	True	AATAAA	-18	NA	15269131	15228209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.71	chr9	-	7065	24	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	25	5534	25	545	5prime_fragment	FALSE	canonical	3	121	junction_16	23.6825252830166	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTTCAGACACTCAT	9732	False	NA	4	True	ATTAAA	-23	NA	15269059	15233749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.72	chr9	-	6885	23	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	-35	5357	-35	545	5prime_fragment	FALSE	canonical	3	46	junction_3	33.1414449277763	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTTCAGACACTCAT	9672	False	NA	4	True	ATTAAA	-23	NA	15269119	15233749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.73	chr9	-	6986	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	80	545	intron_retention	FALSE	canonical	3	9	junction_18	39.7754567104105	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTTCAGACACTCAT	9787	False	NA	4	True	ATTAAA	-23	NA	15269004	15233749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.74	chr9	-	6808	23	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	56	545	intron_retention	FALSE	canonical	1	4	junction_17	49.9641193571997	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTTCAGACACTCAT	9763	False	NA	4	True	ATTAAA	-23	NA	15269028	15233749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15252169_15252278_15252736_15252921_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.76	chr9	-	6905	23	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	34	541	intron_retention	FALSE	canonical	0	0	junction_17	40.0879456748503	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTCACTTCAGACAC	9741	False	NA	0	True	ATTAAA	-19	NA	15269050	15233753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252915_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.77	chr9	-	6698	23	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	116	539	intron_retention	FALSE	canonical	1	1	junction_16	54.6677417081689	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCCTCACTTCAGAC	9823	False	NA	-2	True	ATTAAA	-17	NA	15268968	15233755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252915_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.79	chr9	-	6788	23	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	55	538	intron_retention	FALSE	canonical	0	0	junction_6	45.3605619289752	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGCCTCACTTCAGA	9762	False	NA	-3	True	ATTAAA	-16	NA	15269029	15233756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239239_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.80	chr9	-	6833	23	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	85	537	intron_retention	FALSE	canonical	0	0	junction_16	54.2501856644574	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9792	False	NA	-4	True	ATTAAA	-15	NA	15268999	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255339_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.81	chr9	-	7021	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	55	537	intron_retention	FALSE	canonical	0	0	junction_14	38.7685195698886	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9762	False	NA	-4	True	ATTAAA	-15	NA	15269029	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247936_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.82	chr9	-	8444	22	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	116	537	intron_retention	FALSE	canonical	1	4	junction_16	50.4109641459321	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9823	False	NA	-4	True	ATTAAA	-15	NA	15268968	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247208_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.83	chr9	-	6988	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	57	537	intron_retention	FALSE	canonical	1	1	junction_17	49.4718800806534	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9764	False	NA	-4	True	ATTAAA	-15	NA	15269027	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252915_15255419_15255557_15258263_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.84	chr9	-	6018	21	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	67	537	intron_retention	FALSE	canonical	1	2	junction_19	47.6727385410152	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9774	False	NA	-4	True	ATTAAA	-15	NA	15269017	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15243808_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15265901_15266033_15268921
ES.34456.85	chr9	-	6857	24	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	56	537	intron_retention	FALSE	canonical	2	5	junction_21	58.6328810890401	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAAGCCTCACTTCAG	9763	False	NA	-4	True	ATTAAA	-15	NA	15269028	15233757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258263_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.88	chr9	-	6902	24	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	35	534	intron_retention	FALSE	canonical	2	5	junction_21	52.2500169589611	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAAAAGCCTCACTT	9742	False	NA	-7	True	ATTAAA	-12	NA	15269049	15233760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.89	chr9	-	7154	25	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	26	534	intron_retention	FALSE	canonical	2	5	junction_22	48.615841039727	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAAAAGCCTCACTT	9733	False	NA	-7	True	ATTAAA	-12	NA	15269058	15233760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15263188_15263287_15264194_15264396_15265901_15266033_15268921
ES.34456.90	chr9	-	7027	24	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	64	534	intron_retention	FALSE	canonical	2	11	junction_7	39.4034917320855	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAAAAGCCTCACTT	9771	False	NA	-7	True	ATTAAA	-12	NA	15269020	15233760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241791_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.91	chr9	-	6771	22	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	-1287	534	intron_retention	FALSE	non_canonical	0	0	junction_16	53.0447122397571	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAAAAGCCTCACTT	NA	False	NA	-7	True	ATTAAA	-12	NA	15264398	15233760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252757_15252921_15255419_15255589_15258263_15258333_15262106_15262201_15262986_15263112_15264194
ES.34456.92	chr9	-	6505	20	NNC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	55	532	intron_retention	FALSE	canonical	1	2	junction_18	44.209210506735	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATATGAAAAGCCTCAC	9762	False	NA	-9	True	ATTAAA	-10	NA	15269029	15233762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255557_15265901_15266033_15268921
ES.34456.93	chr9	-	5582	22	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	56	530	intron_retention	FALSE	canonical	2	4	junction_6	54.9861248216538	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAATATGAAAAGCCTC	9763	False	NA	-11	True	ATTAAA	-8	NA	15269028	15233764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15242049_15242207_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.95	chr9	-	5625	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	78	214	intron_retention	FALSE	canonical	2	5	junction_9	38.7090353017052	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGAAGTGCTGGGATT	9785	False	NA	NA	False	AGTAAA	-14	NA	15269006	15234080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15244287_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.96	chr9	-	6724	24	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	34	5866	34	213	5prime_fragment	FALSE	canonical	3	121	junction_16	23.6825252830166	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAGAAGTGCTGGGAT	9741	False	NA	NA	False	AGTAAA	-13	NA	15269050	15234081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.97	chr9	-	6342	23	ISM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	57	5808	57	94	5prime_fragment	FALSE	canonical	3	46	junction_3	33.1414449277763	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATTTGACTCCAGCTTG	9764	False	NA	NA	False	AAAAAG	-23	NA	15269027	15234200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.98	chr9	-	6461	24	NNC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	57	71	intron_retention	FALSE	canonical	0	0	junction_16	60.8922628488893	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTCTCTCCAGCCCTCA	9764	False	NA	NA	False	AAGAAA	-5	NA	15269027	15234223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15254710_15254854_15255419_15255557_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34456.99	chr9	-	7250	21	ISM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	100	7412	100	1210	5prime_fragment	FALSE	canonical	3	121	junction_13	22.0850062259443	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAACTTAGCTCTTTTTT	9807	False	NA	NA	False	ATTAAA	-10	NA	15268984	15235627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ES.34457.1	chr9	+	5968	5	NNC	ENSMUSG00000111763.2	novel	572	3	NA	NA	-12093	5656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATTATATTTTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	15280569	15304377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15280871_15292624_15292748_15295639_15295907_15298501_15299794_15300392
ES.34458.1	chr9	-	175	1	Intergenic	novelGene_28047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTAAGCAGA	3834	False	NA	NA	False	NA	NA	NA	15302623	15302448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_15302400_15302600
ES.34459.1	chr9	+	178	1	Intergenic	novelGene_28048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACCTACAAG	6932	False	NA	NA	False	NA	NA	NA	15322460	15322638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_15322500_15322600
ES.3446.1	chr10	-	1668	1	Intergenic	novelGene_2657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCTGCGAACA	NA	False	NA	NA	False	NA	NA	NA	82932100	82930432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_82930400_82932100
ES.34460.1	chr9	-	146	1	Intergenic	novelGene_28049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGTGACAGAAT	NA	False	NA	NA	False	NA	NA	NA	15369005	15368859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_15368900_15369000
ES.34461.1	chr9	+	914	3	FSM	ENSMUSG00000058173.13	ENSMUST00000215907.2	994	3	80	0	80	0	multi-exon	FALSE	canonical	2	6	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGTGTTTCTCTTGT	NA	False	NA	8	True	AATAAA	-16	NA	15404807	15456553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15404926_15436923_15437001_15455834
ES.34461.2	chr9	+	1152	2	NNC	ENSMUSG00000058173.13	novel	994	3	NA	NA	285	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGTGTTTCTCTTGT	NA	False	NA	8	True	AATAAA	-16	NA	15405012	15456553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15405446_15455834
ES.34462.1	chr9	+	5569	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	-3	973	-2	-973	multi-exon	FALSE	canonical	2	6	junction_1	2.41039415863879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATTAAGTTTTCTACT	NA	False	NA	NA	False	AATAAA	-27	NA	15621031	15653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34462.2	chr9	+	3051	10	NNC	ENSMUSG00000043885.15	novel	6539	11	NA	NA	-2	178	intron_retention	FALSE	canonical	1	3	junction_3	3.09120616516523	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAGCAAAGTACACCTC	NA	False	NA	NA	False	ATTAAA	-37	NA	15621031	15650053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15621134_15630928_15631053_15631995_15633289_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34462.3	chr9	+	6692	10	NIC	ENSMUSG00000043885.15	novel	6539	11	NA	NA	16	-973	intron_retention	FALSE	canonical	2	6	junction_1	2.26077666104176	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATTAAGTTTTCTACT	NA	False	NA	NA	False	AATAAA	-27	NA	15621050	15653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15621134_15630928_15631053_15631995_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34462.4	chr9	+	5533	11	FSM	ENSMUSG00000043885.15	ENSMUST00000115588.8	1745	11	21	-3809	20	-973	multi-exon	FALSE	canonical	0	0	junction_10	3.69323706252388	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATTAAGTTTTCTACT	NA	False	NA	NA	False	AATAAA	-27	NA	15621054	15653684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648325_15649369
ES.34462.5	chr9	+	6665	10	NIC	ENSMUSG00000043885.15	novel	1745	11	NA	NA	23	-980	intron_retention	FALSE	canonical	0	0	junction_9	3.80058475033046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAATGCCTATTAAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	15621057	15653677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_15621134_15630928_15631053_15631995_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648325_15649369
ES.34462.6	chr9	+	1885	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	28	4626	28	156	multi-exon	FALSE	canonical	2	6	junction_1	2.41039415863879	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTCTTTGAAGCACC	NA	False	NA	NA	False	ATTAAA	-15	NA	15621062	15650031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34462.7	chr9	+	6621	11	NNC	ENSMUSG00000043885.15	novel	6539	11	NA	NA	49	160	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	3.06757233003559	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGAACCCTATTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	15621083	15654817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633289_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34462.8	chr9	+	5460	11	NNC	ENSMUSG00000043885.15	novel	6539	11	NA	NA	71	-979	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	3.06757233003559	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCCTATTAAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	15621105	15653678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633289_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ES.34463.1	chr9	+	174	1	Intergenic	novelGene_28050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGACAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	15852795	15852969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_15852800_15853000
ES.34464.1	chr9	-	8013	3	Intergenic	novelGene_28051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTACACACCCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	17395532	17386406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_17387046_17388048_17388149_17388258
ES.34465.1	chr9	-	2993	4	Antisense	novelGene_ENSMUSG00000111534.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTCATTCTTTTATAAC	NA	False	NA	NA	False	AATAAA	-32	NA	17467616	17402073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_17404768_17433485_17433599_17438342_17438424_17467511
ES.34465.2	chr9	-	3295	1	Intergenic	novelGene_28052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTGTTGCTGACAA	NA	False	NA	NA	False	AATAAA	-10	NA	17405390	17402095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_17402100_17405400
ES.34465.3	chr9	-	2414	1	FSM	ENSMUSG00000111405.2	ENSMUST00000214774.2	742	1	-1782	110	-1782	-110	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCGACATTGCCAAGGAG	NA	False	NA	NA	False	NA	NA	NA	17415787	17413373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_17413400_17415800
ES.34465.4	chr9	-	1872	2	Intergenic	novelGene_28053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	17467613	17443744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_17445515_17467511
ES.34466.1	chr9	+	3629	1	Intergenic	novelGene_28054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17480514	17484143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_17480500_17484100
ES.34467.1	chr9	+	1807	1	Genic_Genomic	ENSMUSG00000001774.9	novel	NA	NA	NA	NA	-852	-2718	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATCTAGTATGTATAGT	7513	False	NA	NA	False	AATAAA	-16	NA	18202568	18204375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_18202600_18204400
ES.34467.11	chr9	+	4334	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-62	1988	intron_retention	FALSE	canonical	3	795	junction_1	67.0684190920449	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8478	False	NA	12	True	NA	NA	NA	18203533	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.12	chr9	+	5240	9	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-62	1988	intron_retention	FALSE	canonical	3	795	junction_1	63.7411758598788	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8478	False	NA	12	True	NA	NA	NA	18203533	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.13	chr9	+	2280	12	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-43	1989	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	337.819233778575	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTGTCATGTGTTTT	8497	False	NA	13	True	NA	NA	NA	18203552	18225298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.14	chr9	+	2105	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-37	1987	combination_of_known_junctions	FALSE	canonical	2	42	junction_4	285.699142455836	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8503	False	NA	11	True	NA	NA	NA	18203558	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.15	chr9	+	1975	8	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-37	1987	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	326.5471807021	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8503	False	NA	11	True	NA	NA	NA	18203558	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.16	chr9	+	5277	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-36	1988	intron_retention	FALSE	canonical	3	41	junction_5	371.461112398985	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8504	False	NA	12	True	NA	NA	NA	18203559	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.17	chr9	+	1558	12	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-29	-1676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	270.216900940187	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	8511	False	NA	NA	False	ATTAAA	-11	NA	18203566	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073_18224245_18226653
ES.34467.19	chr9	+	8586	8	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-10	1988	intron_retention	FALSE	canonical	3	795	junction_1	67.1094141636459	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8530	False	NA	12	True	NA	NA	NA	18203585	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.21	chr9	+	4004	12	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	-1676	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	337.819233778575	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	8537	False	NA	NA	False	ATTAAA	-11	NA	18203592	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.23	chr9	+	3837	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	-1676	combination_of_known_junctions	FALSE	canonical	2	42	junction_4	285.699142455836	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	8537	False	NA	NA	False	ATTAAA	-11	NA	18203592	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.25	chr9	+	4190	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	172	1427	-3	-1427	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTGAAAATTGGGTCT	8537	False	NA	NA	False	NA	NA	NA	18203592	18227311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.26	chr9	+	4335	11	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	1985	intron_retention	FALSE	canonical	3	41	junction_6	353.81589845568	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTGTCATGTG	8537	False	NA	9	True	NA	NA	NA	18203592	18225294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18215683_18216588_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.27	chr9	+	8684	8	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	1987	intron_retention	FALSE	canonical	3	795	junction_1	68.1253346743324	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8537	False	NA	11	True	NA	NA	NA	18203592	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18215683_18216588_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.29	chr9	+	8114	9	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	1988	intron_retention	FALSE	canonical	3	41	junction_4	299.527309898447	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8537	False	NA	12	True	NA	NA	NA	18203592	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.3	chr9	+	5875	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-80	-6	-80	6	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGAGTCTGTGGTTTCTC	8285	False	NA	NA	False	ATTAAA	-28	NA	18203340	18228744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.30	chr9	+	2901	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-3	-2612	combination_of_known_junctions	FALSE	canonical	2	42	junction_4	285.699142455836	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCTTGTGTACTACCT	8537	False	NA	NA	False	AAAAAG	-4	NA	18203592	18226126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.31	chr9	+	3124	1	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	-376	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTCCACAGCTTGT	8538	False	NA	NA	False	AATAAA	-10	NA	18203593	18206717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203600_18206700
ES.34467.32	chr9	+	2296	12	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	1987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	355.677400495365	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8538	False	NA	11	True	NA	NA	NA	18203593	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18203757_18206595_18206646_18210869_18210992_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.33	chr9	+	3684	9	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	-1676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	309.316964253498	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	8538	False	NA	NA	False	ATTAAA	-11	NA	18203593	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18203757_18206595_18206646_18212301_18212363_18216586_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.35	chr9	+	6191	8	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	1987	intron_retention	FALSE	canonical	3	795	junction_1	63.9483209717194	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8538	False	NA	11	True	NA	NA	NA	18203593	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18220045_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.36	chr9	+	5466	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-2	2211	intron_retention	FALSE	canonical	3	41	junction_5	371.461112398985	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAAGTTGAAGGTCT	8538	False	NA	NA	False	GATAAA	-9	NA	18203593	18225520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.38	chr9	+	2396	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	173	3220	-2	2209	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATGAAAGTTGAAGGT	8538	False	NA	NA	False	GATAAA	-7	NA	18203593	18225518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.4	chr9	+	2421	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-72	3440	-72	1989	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTGTCATGTGTTTT	8293	False	NA	13	True	NA	NA	NA	18203348	18225298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.40	chr9	+	3004	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	173	2612	-2	-2612	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCTTGTGTACTACCT	8538	False	NA	NA	False	AAAAAG	-4	NA	18203593	18226126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.42	chr9	+	4906	11	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-1	-1678	intron_retention	FALSE	canonical	3	41	junction_6	353.068491938887	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCTGAGTCCTGA	8539	False	NA	NA	False	ATTAAA	-9	NA	18203594	18227060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.44	chr9	+	9120	8	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	0	1985	intron_retention	FALSE	canonical	3	41	junction_4	312.473737671974	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTGTCATGTG	8540	False	NA	9	True	NA	NA	NA	18203595	18225294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18219581_18220045_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.45	chr9	+	5565	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-1	1987	intron_retention	FALSE	canonical	3	795	junction_1	74.4636791071516	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTCTGTCATGTGTT	8545	False	NA	11	True	NA	NA	NA	18203600	18225296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.46	chr9	+	4470	9	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	0	1286	intron_retention	FALSE	canonical	3	795	junction_1	63.7411758598788	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTTTTGTTATTATAA	8546	False	NA	NA	False	TATAAA	-20	NA	18203601	18224595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.47	chr9	+	2157	11	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	9	1983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	276.82384290375	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTGTTTCTGTCATG	8555	False	NA	7	True	NA	NA	NA	18203610	18225292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18203757_18206595_18206646_18212301_18212363_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.49	chr9	+	4334	11	NNC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	11	1985	intron_retention	FALSE	canonical	0	0	junction_3	372.261682153831	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTGTCATGTG	8557	False	NA	9	True	NA	NA	NA	18203612	18225294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18203757_18206595_18206646_18210909_18210992_18212301_18212359_18213321_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.5	chr9	+	4168	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-45	1666	-45	-1666	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTGAGAGAGTCCTGAG	8320	False	NA	NA	False	ATTAAA	-21	NA	18203375	18227072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.50	chr9	+	5035	12	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	11	-625	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	337.819233778575	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCTAATTACAGACTA	8557	False	NA	NA	False	AATAAA	-23	NA	18203612	18228113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.51	chr9	+	6986	10	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	14	-1676	intron_retention	FALSE	canonical	3	41	junction_5	371.461112398985	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	8560	False	NA	NA	False	ATTAAA	-11	NA	18203615	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.52	chr9	+	3822	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	198	1769	17	-1769	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGGAATTTTGTCTT	8563	False	NA	NA	False	NA	NA	NA	18203618	18226969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.56	chr9	+	6850	4	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	-324	1988	intron_retention	FALSE	canonical	3	874	junction_2	31.9304800395415	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	NA	False	NA	12	True	NA	NA	NA	18215791	18225297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.57	chr9	+	7876	5	ISM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	13773	1	697	-1	3prime_fragment	FALSE	canonical	3	874	junction_3	41.5654604208831	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCTTAAGAGTCTGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	18217193	18228737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.58	chr9	+	5571	5	ISM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	14403	1676	1327	-1676	3prime_fragment	FALSE	canonical	3	874	junction_3	41.5654604208831	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTGAGTCCTGAGA	NA	False	NA	NA	False	ATTAAA	-11	NA	18217823	18227062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.59	chr9	+	5245	3	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	2870	1985	intron_retention	FALSE	canonical	3	874	junction_1	38	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTGTCATGTG	NA	False	NA	9	True	NA	NA	NA	18219366	18225294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_18223328_18223725_18223789_18224073
ES.34467.6	chr9	+	2150	1	Genic_Genomic	ENSMUSG00000001774.9	novel	NA	NA	NA	NA	-36	-1559	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAACAAAATAAATTAAA	8329	False	NA	NA	False	AATAAA	-12	NA	18203384	18205534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_18203400_18205500
ES.34467.60	chr9	+	5258	4	ISM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	17398	6	4322	-6	3prime_fragment	FALSE	canonical	3	874	junction_2	31.9304800395415	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAACCTCTTAAGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	18220818	18228732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.7	chr9	+	2138	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	-35	3686	-35	1743	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAAATGTACCTGGA	8330	False	NA	NA	False	AATACA	-22	NA	18203385	18225052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34467.8	chr9	+	5149	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	24	616	24	-616	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAGACTAATGATTAAA	8389	False	NA	NA	False	AATAAA	-32	NA	18203444	18228122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ES.34468.1	chr9	+	6888	1	Antisense	novelGene_ENSMUSG00000043943.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAATAAAGATAAGGGGA	NA	False	NA	NA	False	NA	NA	NA	18231040	18237928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_18231000_18237900
ES.34469.1	chr9	+	178	1	Intergenic	novelGene_28055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	18287176	18287354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_18287200_18287400
ES.3447.1	chr10	+	176	1	Intergenic	novelGene_2658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGATAAAGGATC	NA	False	NA	NA	False	NA	NA	NA	83124154	83124330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83124200_83124300
ES.34470.1	chr9	-	6055	19	FSM	ENSMUSG00000043943.15	ENSMUST00000166825.8	2799	19	-20	-3236	-20	2167	multi-exon	FALSE	canonical	0	0	junction_2	1.64147630029935	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	2038	False	NA	NA	False	NA	NA	NA	18297352	18231079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_18234920_18237471_18237565_18238659_18238742_18241930_18242196_18246223_18246315_18250686_18250779_18258749_18258818_18260145_18260210_18262145_18262229_18262331_18262452_18262705_18262792_18274437_18274537_18275416_18275511_18287718_18287906_18289903_18290030_18291207_18291310_18292090_18292278_18296340_18296453_18297088
ES.34470.2	chr9	-	2258	16	ISM	ENSMUSG00000043943.15	ENSMUST00000166825.8	2799	19	6021	0	5907	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.75878746110306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTTAGCATCAAGAAACA	8079	False	NA	NA	False	AATAAA	-17	NA	18291311	18234315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_18234920_18237471_18237565_18238659_18238742_18241930_18242196_18246223_18246315_18250686_18250779_18258749_18258818_18260145_18260210_18262145_18262229_18262331_18262452_18262705_18262792_18274437_18274537_18275416_18275511_18287718_18287906_18289903_18290030_18291207
ES.34471.1	chr9	+	2225	2	NNC	ENSMUSG00000074502.5	novel	2639	3	NA	NA	2000	-317	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGAATCATTTTTTAT	4851	False	NA	NA	False	TTTAAA	-26	NA	18317715	18322481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_18317849_18320389
ES.34472.1	chr9	+	808	2	Genic_Genomic	ENSMUSG00000074501.7	novel	375	1	NA	NA	-2194	244	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTGCCAATAAAAAGATC	NA	False	NA	NA	False	AATAAA	-17	NA	18336644	18339457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_18336739_18338743
ES.34473.1	chr9	+	1070	2	Antisense	novelGene_ENSMUSG00000074500.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACATCCTAGAA	NA	False	NA	NA	False	AATAAA	-9	NA	18384759	18389178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_18385081_18388429
ES.34474.1	chr9	-	4785	8	NIC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-95	2016	intron_retention	FALSE	canonical	0	0	junction_6	1.82946406783796	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTTCTCTTCATGGAC	1074	False	NA	NA	False	AATAAA	-37	NA	18384950	18364854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_18368349_18368796_18368892_18370952_18371049_18379215_18379343_18379909_18379999_18380574_18380845_18384181_18384291_18384445
ES.34474.2	chr9	-	4514	9	NIC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-117	2015	intron_retention	FALSE	canonical	0	0	junction_3	1.85404962177392	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGTTCTCTTCATGGA	1052	False	NA	NA	False	AATAAA	-36	NA	18384972	18364855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_18368349_18368796_18368892_18370952_18371049_18372635_18372700_18379215_18379343_18379909_18379999_18380574_18380693_18384181_18384291_18384649
ES.34474.3	chr9	-	4205	8	NNC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-116	2015	intron_retention	FALSE	canonical	1	1	junction_1	1.60356745147455	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGTTCTCTTCATGGA	1053	False	NA	NA	False	AATAAA	-36	NA	18384971	18364855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_18368349_18368796_18368892_18370952_18371049_18379215_18379343_18379909_18379999_18380574_18380693_18384181_18384291_18384893
ES.34474.4	chr9	-	4218	8	NNC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-56	2004	intron_retention	TRUE	canonical	0	0	junction_1	1.91662969499982	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCAAACATTATGTAGTT	1113	False	NA	NA	False	AATAAA	-25	NA	18384911	18364866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_18366137_18366178_18368349_18368796_18368892_18370952_18371049_18379215_18379343_18379909_18379999_18384181_18384291_18384649
ES.34474.5	chr9	-	4377	9	NNC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	74	1998	intron_retention	FALSE	canonical	1	1	junction_1	1.65359456941537	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATGGTCAAACATTAT	1380	False	NA	NA	False	AATAAA	-19	NA	18384644	18364872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_18368349_18368796_18368892_18370952_18371049_18372631_18372700_18379215_18379343_18379909_18379999_18380574_18380693_18384181_18384291_18384445
ES.34474.6	chr9	-	4473	7	NIC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-73	1996	intron_retention	FALSE	canonical	1	1	junction_1	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAATGGTCAAACATT	1096	False	NA	NA	False	AATAAA	-17	NA	18384928	18364874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_18368349_18368796_18368892_18370952_18371049_18379215_18379343_18379909_18379999_18384181_18384291_18384445
ES.34474.7	chr9	-	4213	8	NNC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	-59	1996	intron_retention	TRUE	non_canonical	0	0	junction_1	1.91662969499982	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAATGGTCAAACATT	1110	False	NA	NA	False	AATAAA	-17	NA	18384914	18364874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_18366121_18366162_18368349_18368796_18368892_18370952_18371049_18379215_18379343_18379909_18379999_18384181_18384291_18384649
ES.34474.8	chr9	-	3503	4	NNC	ENSMUSG00000074500.12	novel	1701	8	NA	NA	9636	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGTGTATACATTATCT	NA	False	NA	NA	False	NA	NA	NA	18375082	18367487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_18368349_18368796_18368892_18370952_18371049_18372631
ES.34475.1	chr9	-	173	1	Intergenic	novelGene_28056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	18983271	18983098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_18983100_18983300
ES.34476.1	chr9	-	174	1	Intergenic	novelGene_28057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAAAAAAGAATTAC	NA	False	NA	NA	False	NA	NA	NA	19523593	19523419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_19523400_19523600
ES.34477.1	chr9	+	4152	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-151	11	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCCCTGTTTGC	NA	False	NA	25	True	AATAAA	-28	NA	19533246	19561038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.10	chr9	+	4184	11	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	88.2077660980029	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTTTCCCTGTTT	NA	False	NA	23	True	AATAAA	-26	NA	19533380	19561036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19537190_19537292_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.11	chr9	+	2641	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-43	1390	-17	3	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533380	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.12	chr9	+	4010	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	12	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	80.8276522917745	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCCCTGTTTGCT	NA	False	NA	26	True	AATAAA	-29	NA	19533380	19561039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
ES.34477.13	chr9	+	4321	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-43	-290	-17	290	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGTCAGAAACAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	19533380	19561317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.14	chr9	+	4262	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	286	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATCATCAGTCAGAAACA	NA	False	NA	NA	False	AATAAA	-16	NA	19533380	19561313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.15	chr9	+	4054	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	86.4536544918721	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533381	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.16	chr9	+	4028	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	68.308011060197	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATATTTGTTTCCCTGT	NA	False	NA	21	True	AATAAA	-24	NA	19533381	19561034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
ES.34477.17	chr9	+	2652	9	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	77.4721724233934	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533381	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.18	chr9	+	4042	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	65.1161222355877	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533381	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.19	chr9	+	5498	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	3	intron_retention	FALSE	canonical	3	124	junction_2	35.7848509226398	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGATATTTGTTTCC	NA	False	NA	17	True	AATAAA	-20	NA	19533381	19561030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
ES.34477.2	chr9	+	4055	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-83	13	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTCCCTGTTTGCTT	NA	False	NA	27	True	AATAAA	-30	NA	19533314	19561040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.20	chr9	+	6950	7	ISM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-42	-6	-16	6	intron_retention	FALSE	canonical	3	126	junction_2	42.7655105065857	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATATTTGTTTCCCTG	NA	False	NA	20	True	AATAAA	-23	NA	19533381	19561033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904
ES.34477.21	chr9	+	2662	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	72.283188743995	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533381	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556498_19556604_19557997
ES.34477.22	chr9	+	4098	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	124	junction_2	35.7848509226398	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAACTGGCCAGCTCTT	NA	False	NA	5	True	ATTAAA	-8	NA	19533381	19559630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
ES.34477.23	chr9	+	4053	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	72.283188743995	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGATATTTGTTT	NA	False	NA	15	True	AATAAA	-18	NA	19533381	19561028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556498_19556604_19557997
ES.34477.24	chr9	+	5559	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	22	junction_2	82.2395703951298	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGGGACTGATATTT	NA	False	NA	11	True	AATAAA	-14	NA	19533381	19561024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
ES.34477.25	chr9	+	2625	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	68.308011060197	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACTGGCCAGCTCTTT	NA	False	NA	6	True	ATTAAA	-9	NA	19533381	19559631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
ES.34477.26	chr9	+	5556	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-11	11	intron_retention	FALSE	canonical	3	126	junction_2	40.4984252654297	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCCCTGTTTGC	NA	False	NA	25	True	AATAAA	-28	NA	19533386	19561038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
ES.34477.27	chr9	+	2926	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-37	1099	-11	257	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTGGTCAGTAGCATT	NA	False	NA	NA	False	TATAAA	-12	NA	19533386	19559928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.28	chr9	+	3894	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-11	9	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	71.8499002314221	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTTTCCCTGTTT	NA	False	NA	23	True	AATAAA	-26	NA	19533386	19561036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.29	chr9	+	2580	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533386	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.3	chr9	+	4149	10	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-70	-2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	73.2956131946534	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533327	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.30	chr9	+	6891	6	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	8	intron_retention	FALSE	canonical	3	124	junction_2	38.8051542968199	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATATTTGTTTCCCTGTT	NA	False	NA	22	True	AATAAA	-25	NA	19533387	19561035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904
ES.34477.31	chr9	+	2610	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533387	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.32	chr9	+	4143	10	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	89.0818738403811	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATATTTGTTTCCCTG	NA	False	NA	20	True	AATAAA	-23	NA	19533387	19561033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19537190_19537292_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.33	chr9	+	2838	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	157	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	65.1161222355877	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGTGCTTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	19533387	19559828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.34	chr9	+	4234	11	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	5	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	83.9083428509943	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGATATTTGTTTCCCT	NA	False	NA	19	True	AATAAA	-22	NA	19533387	19561032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.35	chr9	+	5360	6	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_4	78.2636569551922	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533387	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19554904_19556604_19557997
ES.34477.36	chr9	+	4010	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	86.2840512493474	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533388	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.37	chr9	+	4065	10	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	81.3412260894093	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533388	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.38	chr9	+	4061	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.5187654908176	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533388	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553064_19553184_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.39	chr9	+	4735	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-9	767	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGATTTCCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	19533388	19561794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.4	chr9	+	4029	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-20	6	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_4	79.7542122712023	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGATATTTGTTTCCCTG	NA	False	NA	20	True	AATAAA	-23	NA	19533377	19561033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.40	chr9	+	2801	11	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	84.5044969217615	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGCTCTTTATTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	19533388	19559637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19537190_19537292_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.41	chr9	+	3947	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-7	9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	74.5949607095902	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTTGTTTCCCTGTTT	NA	False	NA	23	True	AATAAA	-26	NA	19533390	19561036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19557997
ES.34477.42	chr9	+	2673	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-6	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.5187654908176	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTCTTTATTGTTGTT	NA	False	NA	15	True	ATTAAA	-18	NA	19533391	19559640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553064_19553184_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.43	chr9	+	6804	6	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	4	junction_4	85.2675788327545	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533391	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553893_19554021_19554904
ES.34477.44	chr9	+	4005	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	87.6837356640329	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATATTTGTTTCCCTGT	NA	False	NA	21	True	AATAAA	-24	NA	19533393	19561034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556507_19556595_19557997
ES.34477.45	chr9	+	6032	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	126	junction_2	40.6119850947148	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533393	19561027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19554021_19554904_19556604_19557997
ES.34477.46	chr9	+	4021	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.9631353882376	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATATTTGTTTCCCTGTT	NA	False	NA	22	True	AATAAA	-25	NA	19533396	19561035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556498_19556604_19557997
ES.34477.47	chr9	+	6075	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	5	2121	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGCATGTGTCTCTG	NA	False	NA	NA	False	ATTAAA	-44	NA	19533402	19563148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.48	chr9	+	4074	10	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	86.609525322237	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533402	19561027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.49	chr9	+	7024	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	88.1126366345593	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533402	19561027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19537190_19537292_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904
ES.34477.5	chr9	+	4045	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	-46	-11	-20	11	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTCCCTGTTTGC	NA	False	NA	25	True	AATAAA	-28	NA	19533377	19561038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.50	chr9	+	4233	11	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.9430591084333	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533404	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556498_19556604_19557997
ES.34477.51	chr9	+	5436	7	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-7	0	intron_retention	FALSE	canonical	3	24	junction_3	73.9947445581253	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533416	19561027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19556604_19557997
ES.34477.52	chr9	+	3796	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	76.8418288867897	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGGGACTGATATTT	NA	False	NA	11	True	AATAAA	-14	NA	19533417	19561024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.53	chr9	+	5372	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	4	junction_4	77.1463256127961	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533418	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553893_19554021_19554904_19556604_19557997
ES.34477.54	chr9	+	5685	7	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-5	158	intron_retention	FALSE	canonical	3	24	junction_4	73.1269824042778	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	19533418	19559829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904
ES.34477.55	chr9	+	4287	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-5	290	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	80.8575135655308	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGTCAGAAACAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	19533418	19561317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556595_19557997
ES.34477.56	chr9	+	3923	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	84.972984902646	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533421	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.57	chr9	+	2678	10	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	81.3412260894093	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGCTTCTCTCTCTTTT	NA	False	NA	47	True	NA	NA	NA	19533421	19559672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.58	chr9	+	4341	10	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-2	308	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	81.3412260894093	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCAATCTCAATGCATCC	NA	False	NA	NA	False	AATAAA	-38	NA	19533421	19561335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.59	chr9	+	8103	5	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	1	-1	intron_retention	FALSE	canonical	3	126	junction_2	47.3939605857118	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533424	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19554021_19554904
ES.34477.6	chr9	+	3988	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	67.9891948198013	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19533380	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.60	chr9	+	4220	11	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.4180481030393	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGATATTTGTTTCCCT	NA	False	NA	19	True	AATAAA	-22	NA	19533428	19561032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19537190_19537292_19540392_19540503_19552361_19552551_19553064_19553184_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.61	chr9	+	4039	10	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	81.3047915919011	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533430	19561027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
ES.34477.62	chr9	+	3568	11	NNC	ENSMUSG00000057551.11	novel	2809	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.0180751279656	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCCAGCTCTTTATT	NA	False	NA	9	True	ATTAAA	-12	NA	19533578	19559634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19534529_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.63	chr9	+	3538	1	NIC	ENSMUSG00000057551.11	novel	2809	11	NA	NA	497	1272	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCATTGTTCCCCAAGT	NA	False	NA	NA	False	AAGAAA	-1	NA	19534591	19538129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19534600_19538100
ES.34477.64	chr9	+	3842	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	6297	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	67.421912504128	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19540391	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
ES.34477.65	chr9	+	3830	8	ISM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	6968	1	6297	-1	3prime_fragment	FALSE	canonical	3	126	junction_1	39.5438274034556	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGACTGATATTTGT	NA	False	NA	13	True	AATAAA	-16	NA	19540391	19561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.66	chr9	+	3405	2	ISM	ENSMUSG00000057551.11	ENSMUST00000079042.7	1824	6	3998	-1972	3998	289	3prime_fragment	FALSE	canonical	3	207	junction_1	0	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATCAGTCAGAAACAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	19556517	19561316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_19556604_19557997
ES.34477.7	chr9	+	3965	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	71.9801559955441	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGGGACTGATATTTG	NA	False	NA	12	True	AATAAA	-15	NA	19533380	19561025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
ES.34477.8	chr9	+	4055	9	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	12	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	77.4721724233934	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCCCTGTTTGCT	NA	False	NA	26	True	AATAAA	-29	NA	19533380	19561039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ES.34477.9	chr9	+	4000	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	74.4684565464342	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTGATATTTGTTTCC	NA	False	NA	17	True	AATAAA	-20	NA	19533380	19561030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557976
ES.34478.1	chr9	+	4696	2	Intergenic	novelGene_28058	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTTGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	19972172	19983239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_19973453_19979823
ES.34479.1	chr9	-	4701	7	FSM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	53	-3	53	3	multi-exon	FALSE	canonical	1	1	junction_4	13.5113121330075	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTCAGTATTGACATTT	NA	False	NA	NA	False	NA	NA	NA	20296420	20256428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20260456_20260876_20260960_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
ES.34479.2	chr9	-	4604	6	NIC	ENSMUSG00000045519.16	novel	4751	7	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	13.847743498491	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAACTCAGTATTGACA	NA	False	NA	NA	False	NA	NA	NA	20296409	20256431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20260456_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
ES.34479.3	chr9	-	3938	7	FSM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	-30	843	-30	-843	multi-exon	FALSE	canonical	1	1	junction_4	13.5113121330075	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTCTGACTTATTTTC	NA	False	NA	NA	False	NA	NA	NA	20296503	20257274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20260456_20260876_20260960_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
ES.34479.4	chr9	-	2905	7	FSM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	1	1845	1	-1845	multi-exon	FALSE	canonical	1	1	junction_4	13.5113121330075	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGCGTATGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	20296472	20258276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20260456_20260876_20260960_20261827_20261909_20263133_20263261_20264048_20264138_20265359_20265546_20296312
ES.34479.5	chr9	-	629	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	39	-60	39	60	multi-exon	FALSE	canonical	3	31	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATTATTGTGAACATCAT	NA	False	NA	NA	False	NA	NA	NA	20296434	20263816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20264138_20265359_20265546_20296312
ES.3448.1	chr10	+	171	1	Intergenic	novelGene_2659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	83143815	83143986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83143800_83144000
ES.34480.1	chr9	+	3882	2	Antisense	novelGene_ENSMUSG00000063108.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	20338613	20342569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20340109_20340182
ES.34480.2	chr9	+	3886	2	Antisense	novelGene_ENSMUSG00000063108.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	20338613	20342569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20340220_20340289
ES.34480.3	chr9	+	3956	1	Antisense	novelGene_ENSMUSG00000063108.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	20338613	20342569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20338600_20342600
ES.34481.1	chr9	+	2341	1	Intergenic	novelGene_28059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20359042	20361383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20359000_20361400
ES.34482.1	chr9	+	2980	1	Antisense	novelGene_ENSMUSG00000111626.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTATTATTTATTTAAG	NA	False	NA	NA	False	AATAAA	-22	NA	20367307	20370287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20367300_20370300
ES.34483.1	chr9	-	6783	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	35	2287	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	CATAAA	-23	NA	20371218	20344038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
ES.34483.10	chr9	-	6860	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-32	2065	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.2249681853052	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371155	20344260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20354485_20354604_20355554_20355664_20356189_20356282_20357041_20357194_20370842
ES.34483.11	chr9	-	6770	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	-10	4516	-8	2065	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371466	20344260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.13	chr9	-	6607	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-11	2065	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371264	20344260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
ES.34483.15	chr9	-	6747	9	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-19	2065	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	21.8342477543881	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371142	20344260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842
ES.34483.16	chr9	-	8895	4	ISM	ENSMUSG00000063108.16	ENSMUST00000098970.10	5057	9	15596	-2064	-2987	2064	intron_retention	FALSE	canonical	3	64	junction_2	7.71722460186015	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTTGCTGTGTA	NA	False	NA	-2	True	AATAAA	-20	NA	20355657	20344261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624
ES.34483.19	chr9	-	6377	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-44	2064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.3976409692551	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGAGTCTTGCTGTGTA	NA	False	NA	-2	True	AATAAA	-20	NA	20371167	20344261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20347970_20348345_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842
ES.34483.2	chr9	-	6887	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	60	2287	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	21.1922417670031	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	CATAAA	-23	NA	20371396	20344038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371275
ES.34483.20	chr9	-	6716	11	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	10	2063	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.8105883313757	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGAGTCTTGCTGTGT	NA	False	NA	-3	True	AATAAA	-19	NA	20371275	20344262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20354485_20354625_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.22	chr9	-	6752	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-68	2062	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	21.7942114865619	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	-4	True	AATAAA	-18	NA	20371526	20344263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371315
ES.34483.23	chr9	-	6713	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	9	2062	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	21.1922417670031	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	-4	True	AATAAA	-18	NA	20371447	20344263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371275
ES.34483.24	chr9	-	6581	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	2	2062	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	21.7942114865619	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	-4	True	AATAAA	-18	NA	20371251	20344263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371211
ES.34483.25	chr9	-	6629	9	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-47	2062	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	28.1547065337219	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGAGTCTTGCTGTG	NA	False	NA	-4	True	AATAAA	-18	NA	20371170	20344263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370985
ES.34483.26	chr9	-	6499	8	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-25	2058	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.8147857433435	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGAGACAGAGTCTTGC	NA	False	NA	-8	True	AATAAA	-14	NA	20371148	20344267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20355554_20355664_20356189_20356282_20357041_20357194_20370985
ES.34483.27	chr9	-	6506	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-12	2056	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	25.7038421252543	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTGAGACAGAGTCTT	NA	False	NA	-10	True	AATAAA	-12	NA	20371297	20344269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.28	chr9	-	6375	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	172	4729	1	1852	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTATCCTATGATGTT	NA	False	NA	NA	False	AATATA	-24	NA	20371284	20344473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.3	chr9	-	7011	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	-29	4294	-27	2287	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	CATAAA	-23	NA	20371485	20344038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.30	chr9	-	6117	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	172	4987	1	1594	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTATGAGTTTTTATA	NA	False	NA	NA	False	TTTAAA	-39	NA	20371284	20344731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.31	chr9	-	6414	9	ISM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	154	4991	-17	1590	intron_retention	FALSE	canonical	3	62	junction_5	6.557438524302	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGTTTTATGAGTTTT	NA	False	NA	NA	False	TTTAAA	-35	NA	20371302	20344735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842
ES.34483.32	chr9	-	8112	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-9	1586	intron_retention	FALSE	canonical	3	28	junction_8	14.9895797139213	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTATGTTTTATGAG	NA	False	NA	NA	False	TTTAAA	-31	NA	20371294	20344739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.33	chr9	-	6134	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	1	1586	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	26.1618891604648	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTATGTTTTATGAG	NA	False	NA	NA	False	TTTAAA	-31	NA	20371252	20344739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842_20370958_20371201
ES.34483.34	chr9	-	5633	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	172	5471	1	1110	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGGACTTTTGATCT	NA	False	NA	NA	False	NA	NA	NA	20371284	20345215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.35	chr9	-	5381	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-11	932	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	25.7038421252543	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGCCATTGACTATAT	NA	False	NA	NA	False	NA	NA	NA	20371296	20345393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.36	chr9	-	5474	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	0	932	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	23.1036312682179	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGCCATTGACTATAT	NA	False	NA	NA	False	NA	NA	NA	20371285	20345393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.37	chr9	-	5471	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	10	928	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	21.7942114865619	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGCCTGCCATTGACT	NA	False	NA	NA	False	NA	NA	NA	20371275	20345397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371211
ES.34483.39	chr9	-	4766	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	10	6500	10	81	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGATTTGCATTTTTC	NA	False	NA	NA	False	TTTAAA	-20	NA	20371446	20346244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.4	chr9	-	6813	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-5	2287	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	21.7942114865619	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGATGGTTCCTTCG	NA	False	NA	NA	False	CATAAA	-23	NA	20371258	20344038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371211
ES.34483.40	chr9	-	7299	8	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-8	75	intron_retention	FALSE	canonical	3	28	junction_7	16.0165730493417	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCAGTTTTGATTTGCA	NA	False	NA	NA	False	TTTAAA	-14	NA	20371466	20346250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.41	chr9	-	4565	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTACCTAGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	20371288	20346326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
ES.34483.43	chr9	-	4042	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	171	7063	0	-482	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTGAGTTCTAAGTC	NA	False	NA	NA	False	NA	NA	NA	20371285	20346807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.44	chr9	-	3196	10	NNC	ENSMUSG00000063108.16	novel	5057	9	NA	NA	1	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8992788281339	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTCTATGAGTGTTGA	NA	False	NA	NA	False	AATATA	-17	NA	20371252	20347454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349734_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842_20370958_20371201
ES.34483.45	chr9	-	5449	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-1	792	intron_retention	FALSE	canonical	3	28	junction_8	14.9895797139213	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAACTCATTCTGAG	NA	False	NA	NA	False	TATAAA	-24	NA	20371457	20347565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.46	chr9	-	227	1	Intergenic	novelGene_28060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAATCCATTCTATTAGT	NA	False	NA	NA	False	NA	NA	NA	20361712	20361485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20361500_20361700
ES.34483.7	chr9	-	6664	9	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-12	2269	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	25.5094957809832	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	CATAAA	-5	NA	20371265	20344056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.8	chr9	-	6802	10	NNC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	-28	2232	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	23.1036312682179	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTGACTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	20371313	20344093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355682_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ES.34483.9	chr9	-	5937	6	NNC	ENSMUSG00000063108.16	novel	5057	9	NA	NA	-846	2066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.63843571147	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTCTTGCTGTGTAGT	NA	False	NA	0	True	AATAAA	-22	NA	20353516	20344259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20348737_20348831_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475
ES.34484.1	chr9	+	163	1	Intergenic	novelGene_28061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	20383377	20383540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20383400_20383500
ES.34485.1	chr9	+	1078	1	Intergenic	novelGene_28063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20394681	20395759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20394700_20395800
ES.34486.1	chr9	-	3925	8	NIC	ENSMUSG00000059475.14	novel	3160	9	NA	NA	-8	227	intron_retention	TRUE	canonical	1	2	junction_6	11.1153506651011	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGCATGGTGTCACAT	NA	False	NA	NA	False	NA	NA	NA	20404050	20379617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389576_20397625_20397734_20403681
ES.34486.10	chr9	-	3285	8	NNC	ENSMUSG00000059475.14	novel	3557	7	NA	NA	-7	-219	intron_retention	FALSE	canonical	0	0	junction_6	13.5058566283411	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTATGACTTTGCT	NA	False	NA	-8	True	NA	NA	NA	20404014	20380222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389576_20397612_20397722_20403681
ES.34486.12	chr9	-	2539	9	NNC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	-2	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	13.555441711726	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTCCATACACTCCTG	NA	False	NA	NA	False	AATAAA	-24	NA	20404044	20380815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397612_20397734_20403605_20403748_20403993
ES.34486.13	chr9	-	2537	7	FSM	ENSMUSG00000059475.14	ENSMUST00000115562.9	3557	7	45	975	0	23	multi-exon	FALSE	canonical	2	5	junction_6	10.4309901522126	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATTCTCCATACACT	NA	False	NA	NA	False	AATAAA	-20	NA	20403997	20380819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
ES.34486.14	chr9	-	2494	9	NIC	ENSMUSG00000059475.14	novel	2135	9	NA	NA	-15	19	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	11.910473332324	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGCATTCTCCATA	NA	False	NA	NA	False	AATAAA	-16	NA	20404057	20380823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386372_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
ES.34486.16	chr9	-	2903	1	Intergenic	novelGene_28062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGAAAAGTATGGTGTGA	NA	False	NA	NA	False	AAAAAG	-7	NA	20393054	20390151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20390200_20393100
ES.34486.17	chr9	-	505	3	ISM	ENSMUSG00000059475.14	ENSMUST00000163427.8	720	8	-2	14904	-2	-9605	5prime_fragment	FALSE	canonical	2	5	junction_2	4	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTGTGTATTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	20404029	20397330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20397734_20403681_20403748_20403993
ES.34486.18	chr9	-	3455	1	Genic_Genomic	ENSMUSG00000059475.14	novel	NA	NA	NA	NA	-2	-12864	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCAAAATCCAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	20404044	20400589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_20400600_20404000
ES.34486.19	chr9	-	2163	3	NNC	ENSMUSG00000059475.14	novel	4262	7	NA	NA	-2	-13381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTAGTTTTGTATTAT	NA	False	NA	NA	False	AATAAA	-22	NA	20404044	20401106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20403153_20403681_20403748_20403993
ES.34486.2	chr9	-	3434	10	NNC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	2	79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.9681471115257	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCCCGTCTTTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	20404036	20379924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20401902_20402004_20403681_20403748_20403993
ES.34486.3	chr9	-	3511	8	NNC	ENSMUSG00000059475.14	novel	2417	9	NA	NA	3	-1	intron_retention	FALSE	canonical	1	1	junction_6	11.3730795642829	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGGAGTCTTGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	20404035	20380004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397612_20397734_20403681
ES.34486.4	chr9	-	3042	9	FSM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	3	-628	3	-211	multi-exon	FALSE	canonical	2	5	junction_8	9.71387538524146	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTTGCTGCATTAAC	NA	False	NA	0	True	NA	NA	NA	20404035	20380214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
ES.34486.5	chr9	-	3174	7	FSM	ENSMUSG00000059475.14	ENSMUST00000115562.9	3557	7	7	376	3	-217	multi-exon	FALSE	canonical	2	5	junction_6	10.4309901522126	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404035	20380220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
ES.34486.8	chr9	-	3258	8	NNC	ENSMUSG00000059475.14	novel	2135	9	NA	NA	-7	-218	intron_retention	FALSE	canonical	0	0	junction_6	13.871126964501	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTATGACTTTGCTG	NA	False	NA	-7	True	NA	NA	NA	20404014	20380221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389564_20397625_20397722_20403681
ES.34486.9	chr9	-	3199	7	NIC	ENSMUSG00000059475.14	novel	3557	7	NA	NA	2	-218	intron_retention	FALSE	canonical	0	0	junction_6	11.9861030642435	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTATGACTTTGCTG	NA	False	NA	-7	True	NA	NA	NA	20404036	20380221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389576_20403681
ES.34487.1	chr9	-	6510	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	-211	-16	-211	16	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGAGTGGACTAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	20432924	20406347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ES.34487.10	chr9	-	6068	6	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	-207	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	23.5321057281324	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432920	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20432639
ES.34487.11	chr9	-	5849	6	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	23.5321057281324	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432712	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20432650
ES.34487.13	chr9	-	1852	10	NNC	ENSMUSG00000060510.15	novel	2266	9	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.4257052559581	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432712	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20406766_20411176_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
ES.34487.14	chr9	-	6304	10	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	-155	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.9524125216	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432868	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20408508_20408633_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ES.34487.15	chr9	-	6547	10	NIC	ENSMUSG00000060510.15	novel	2266	9	NA	NA	-192	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	23.129800135777	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432905	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20418928_20419020_20419314_20419482_20432315_20432416_20432650
ES.34487.16	chr9	-	6432	10	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.3493098236662	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432713	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20426266_20426424_20432315_20432416_20432639
ES.34487.17	chr9	-	6134	8	NIC	ENSMUSG00000060510.15	novel	2266	9	NA	NA	21	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	19.9192246386269	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432683	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432650
ES.34487.18	chr9	-	7399	8	NIC	ENSMUSG00000060510.15	novel	2266	9	NA	NA	1	-8	intron_retention	FALSE	canonical	3	22	junction_7	12.9441500457992	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432712	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20419482_20432315_20432416_20432650
ES.34487.19	chr9	-	6265	9	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	26.355442986222	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432712	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20418928_20419020_20419314_20419482_20432639
ES.34487.2	chr9	-	6183	9	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.8292912745489	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432692	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419414_20432315_20432416_20432650
ES.34487.20	chr9	-	5941	10	NNC	ENSMUSG00000060510.15	novel	2266	9	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	18.178130939248	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432694	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411359_20411662_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
ES.34487.21	chr9	-	6282	10	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.0190253808708	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGTGTGTTAATGT	NA	False	NA	NA	False	ATTAAA	-10	NA	20432682	20406371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418126_20418928_20419020_20419314_20419482_20432315_20432416_20432639
ES.34487.22	chr9	-	3921	1	ISM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	21019	1410	20868	-1410	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTCCAAAATAAAGCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	20411694	20407773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20407800_20411700
ES.34487.23	chr9	-	1678	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	4605	0	-608	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGGAAAGCCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	20432713	20410968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ES.34487.24	chr9	-	1764	10	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	1	-612	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	23.3116301181499	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATGTGGGAAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	20432712	20410972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20418928_20419020_20419314_20419482_20432315_20432416_20432639
ES.34487.25	chr9	-	2779	8	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	11742	-613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	20.2585330975692	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAATGTGGGAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	20420820	20410973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20420700_20420758
ES.34487.27	chr9	-	1806	9	FSM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	-153	613	-144	-613	multi-exon	FALSE	canonical	3	22	junction_8	12.1140414395857	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAATGTGGGAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	20432857	20410973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
ES.34487.28	chr9	-	1562	8	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	2	-613	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	18.5659332528968	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAATGTGGGAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	20432702	20410973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432639
ES.34487.29	chr9	-	3745	1	Intergenic	novelGene_28064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTTCCAGCCTTAG	664	False	NA	NA	False	NA	NA	NA	20430583	20426838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20426800_20430600
ES.34487.3	chr9	-	6272	9	FSM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	-9	-3997	0	0	multi-exon	FALSE	canonical	3	22	junction_8	12.1140414395857	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432713	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
ES.34487.4	chr9	-	6375	8	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	-192	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	18.5659332528968	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432905	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432639
ES.34487.5	chr9	-	6217	9	NNC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	20.4568906483854	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432711	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418126_20419314_20419482_20432315_20432416_20432650
ES.34487.6	chr9	-	6123	8	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	21.1013105309232	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432719	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20419314_20419482_20432315_20432416_20432650
ES.34487.7	chr9	-	6353	10	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	23.3116301181499	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432692	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20418928_20419020_20419314_20419482_20432315_20432416_20432639
ES.34487.8	chr9	-	5994	7	NIC	ENSMUSG00000060510.15	novel	6283	9	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	23.2426810463471	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432746	20406363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20432315_20432416_20432639
ES.34488.1	chr9	-	176	1	Intergenic	novelGene_28065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAGGAAAACC	NA	False	NA	NA	False	NA	NA	NA	20437566	20437390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20437400_20437600
ES.34489.1	chr9	-	169	1	Intergenic	novelGene_28066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACAAAAAAAAAAAGGCCT	8623	False	NA	NA	False	NA	NA	NA	20451354	20451185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20451200_20451400
ES.3449.1	chr10	+	176	1	Intergenic	novelGene_2660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGATGTGCCA	NA	False	NA	NA	False	NA	NA	NA	83155268	83155444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83155300_83155400
ES.34490.1	chr9	-	4500	1	Intergenic	novelGene_28067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTATTTTATGTGTA	3292	False	NA	NA	False	ATTAAA	-9	NA	20456685	20452185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20452200_20456700
ES.34491.1	chr9	-	178	1	Intergenic	novelGene_28068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATTGAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	20469564	20469386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20469400_20469600
ES.34492.1	chr9	+	5820	6	NNC	ENSMUSG00000058192.17	novel	12974	6	NA	NA	17	3323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.150618361047	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAACAACAAAACG	NA	False	NA	NA	False	NA	NA	NA	20492603	20509813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20492696_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ES.34492.10	chr9	+	1612	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	199	11163	-1	-225	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAAAACCTTATAAGTG	41	False	NA	NA	False	NA	NA	NA	20492819	20505542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ES.34492.11	chr9	+	2468	5	NIC	ENSMUSG00000058192.17	novel	2661	7	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	13.8744369255116	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACAGCAGCTGAGTTT	42	False	NA	17	True	ATTAAA	-17	NA	20492820	20506482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20504456
ES.34492.12	chr9	+	3906	6	NIC	ENSMUSG00000058192.17	novel	2661	7	NA	NA	0	-9	intron_retention	FALSE	canonical	3	7	junction_3	10.0876161703348	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTACAGCAGCTGAGTT	42	False	NA	16	True	ATTAAA	-16	NA	20492820	20506481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20492975_20499130_20499220_20499804_20499932_20500752_20502181_20502634_20502718_20504456
ES.34492.13	chr9	+	3359	5	ISM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	200	11154	0	-216	intron_retention	FALSE	canonical	3	29	junction_1	4.06201920231798	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAAGTGTAAGTACTG	42	False	NA	NA	False	NA	NA	NA	20492820	20505551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634
ES.34492.14	chr9	+	2943	1	ISM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	12801	8341	6235	1874	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGGCATTAGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	20505421	20508364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20505400_20508400
ES.34492.15	chr9	+	11119	2	NNC	ENSMUSG00000058192.17	novel	1626	5	NA	NA	6304	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGAAATTGTTGATTA	NA	False	NA	NA	False	NA	NA	NA	20505490	20516700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20509869_20509959
ES.34492.16	chr9	+	4655	2	NNC	ENSMUSG00000058192.17	novel	12974	6	NA	NA	9829	-2944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAAACCTGCACACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	20509015	20513761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20509869_20509959
ES.34492.2	chr9	+	2768	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	-17	10223	17	-8	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACAGCAGCTGAGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	20492603	20506482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ES.34492.3	chr9	+	790	5	NNC	ENSMUSG00000058192.17	novel	12974	6	NA	NA	-7	2383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.1224171348366	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATCCTTAGTGCAGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	20492613	20502467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20492728_20492873_20492975_20499130_20499220_20499804_20499932_20502108
ES.34492.4	chr9	+	1798	7	FSM	ENSMUSG00000058192.17	ENSMUST00000140668.8	2661	7	-85	948	-85	-225	multi-exon	FALSE	canonical	2	6	junction_4	12.0369800568452	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAAAACCTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	20492735	20505542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20500752_20500855_20502108_20502181_20502634_20502718_20504456
ES.34492.5	chr9	+	2739	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	121	10114	-79	101	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGTCCTTTCCACAAA	NA	False	NA	126	True	AATAAA	-14	NA	20492741	20506591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ES.34492.6	chr9	+	750	1	FSM	ENSMUSG00000058192.17	ENSMUST00000214194.2	903	1	155	-2	-79	2	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20492741	20493491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492700_20493500
ES.34492.7	chr9	+	3134	7	NNC	ENSMUSG00000058192.17	novel	2661	7	NA	NA	-49	286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.1116579071663	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGCTTCTGGTAATTC	-7	True	NA	NA	False	NA	NA	NA	20492771	20506776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20492975_20499130_20499220_20499804_20499932_20500752_20500855_20502108_20502181_20502634_20502856_20504456
ES.34492.8	chr9	+	2461	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	152	10361	-48	-146	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATTTTATGTTGGCT	-6	True	NA	NA	False	AATACA	-18	NA	20492772	20506344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ES.34492.9	chr9	+	2256	5	ISM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	181	12276	-19	-1338	5prime_fragment	FALSE	canonical	3	29	junction_1	4.06201920231798	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGATTCCTCCCTTTA	23	False	NA	NA	False	AATAAA	-16	NA	20492801	20504429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634
ES.34493.1	chr9	-	2186	3	Antisense	novelGene_ENSMUSG00000058192.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	2311	False	NA	NA	False	NA	NA	NA	20496042	20493721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_20493808_20493855_20494415_20494501
ES.34494.1	chr9	-	176	1	Intergenic	novelGene_28069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATATATACATAAAA	NA	False	NA	NA	False	NA	NA	NA	20503463	20503287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20503300_20503500
ES.34495.1	chr9	-	2203	2	Genic_Genomic	ENSMUSG00000111547.2	novel	1484	1	NA	NA	5	9254	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCTCCCTCTCCCTT	2681	False	NA	NA	False	NA	NA	NA	20518907	20508174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_20509811_20518340
ES.34496.1	chr9	+	3357	4	ISM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	-462	175	-22	12	intron_retention	FALSE	canonical	3	1048	junction_1	67.7462586092808	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGAGAGTTGTG	9522	False	NA	30	True	AATAAA	-27	NA	20554151	20558085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917
ES.34496.10	chr9	+	524	4	FSM	ENSMUSG00000084786.10	ENSMUST00000160124.2	501	4	-9	-14	-9	12	multi-exon	FALSE	canonical	3	1046	junction_3	68.2658203072535	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGAGAGTTGTG	NA	False	NA	30	True	AATAAA	-27	NA	20556327	20558085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556556_20556701_20556786_20556917_20556956_20557911
ES.34496.2	chr9	+	1921	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	20	173	20	14	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGAGTTGTGTG	10004	False	NA	32	True	AATAAA	-29	NA	20554633	20558087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ES.34496.3	chr9	+	1574	3	FSM	ENSMUSG00000084786.10	ENSMUST00000161595.8	642	3	-36	-896	-23	25	multi-exon	FALSE	canonical	3	1048	junction_1	4.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTGTGTGAGGGCAGAG	NA	False	NA	43	True	AATAAA	-40	NA	20556093	20558098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556190_20556488_20556786_20556917
ES.34496.4	chr9	+	452	5	FSM	ENSMUSG00000084786.10	ENSMUST00000160874.8	412	5	-28	-12	-14	10	multi-exon	FALSE	canonical	1	1	junction_3	478.321740567999	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTGTGTGAGAGTTG	NA	False	NA	28	True	AATAAA	-25	NA	20556102	20558083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556190_20556488_20556556_20556701_20556790_20556917_20556956_20557911
ES.34496.5	chr9	+	577	4	FSM	ENSMUSG00000084786.10	ENSMUST00000154429.9	2511	4	1936	-2	-7	0	multi-exon	FALSE	canonical	3	1046	junction_3	4.78423336480244	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556109	20558073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556190_20556488_20556786_20556917_20556956_20557911
ES.34496.6	chr9	+	463	5	FSM	ENSMUSG00000084786.10	ENSMUST00000161486.8	794	5	-20	351	-7	12	multi-exon	FALSE	canonical	3	14	junction_3	472.738828530088	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGAGAGTTGTG	NA	False	NA	30	True	AATAAA	-27	NA	20556109	20558085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556897_20556956_20557911
ES.34496.8	chr9	+	436	5	NNC	ENSMUSG00000084786.10	novel	2114	5	NA	NA	-4	11	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	464.581195809731	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTTGTGTGAGAGTTGT	NA	False	NA	29	True	AATAAA	-26	NA	20556112	20558084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20556190_20556488_20556556_20556701_20556783_20556917_20556956_20557911
ES.34496.9	chr9	+	300	3	NIC	ENSMUSG00000084786.10	novel	412	5	NA	NA	0	12	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	522	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGAGAGTTGTG	NA	False	NA	30	True	AATAAA	-27	NA	20556130	20558085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20556190_20556488_20556556_20557911
ES.34497.1	chr9	-	4034	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	-1945	-3	-4	0	multi-exon	FALSE	canonical	3	69	junction_2	12	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556047	20549081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20550495_20553319_20553393_20553499
ES.34497.10	chr9	-	4649	3	NNC	ENSMUSG00000066892.15	novel	2086	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556072	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20552726_20553393_20553499
ES.34497.11	chr9	-	3223	2	NNC	ENSMUSG00000066892.15	novel	2086	3	NA	NA	463	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20553146	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20551706_20552544
ES.34497.12	chr9	-	2384	4	NNC	ENSMUSG00000066892.15	novel	761	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.0665559243899	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556072	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20552726_20553393_20555490_20555595_20555868
ES.34497.13	chr9	-	1909	6	NNC	ENSMUSG00000066892.15	novel	3756	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5887194125629	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGTGTTGCACTTAT	NA	False	NA	-6	True	ATTAAA	-16	NA	20556050	20549086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20552726_20552808_20553319_20553393_20553499_20553561_20555490_20555595_20555868
ES.34497.14	chr9	-	4845	2	ISM	ENSMUSG00000066892.15	ENSMUST00000153154.2	808	3	9	-3772	9	-2	intron_retention	FALSE	canonical	3	47	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGTGTTGCACTTAT	NA	False	NA	-6	True	ATTAAA	-16	NA	20556029	20549086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20553393_20555490
ES.34497.15	chr9	-	405	2	NNC	ENSMUSG00000066892.15	novel	808	3	NA	NA	-9	-2712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGAATCCCTTCTTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	20556072	20555570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20555772_20555868
ES.34497.2	chr9	-	3646	5	NNC	ENSMUSG00000066892.15	novel	3756	4	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	39.308873044136	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556027	20549081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20553319_20553393_20553499_20555397_20555490_20555595_20555868
ES.34497.3	chr9	-	1971	2	NIC	ENSMUSG00000066892.15	novel	2056	3	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556050	20549083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20550495_20555490
ES.34497.4	chr9	-	1820	5	NNC	ENSMUSG00000066892.15	novel	761	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.8729303501073	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTTGCACTTATTTA	NA	False	NA	-3	True	ATTAAA	-19	NA	20556050	20549083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20552726_20552777_20553319_20553393_20555490_20555595_20555868
ES.34497.5	chr9	-	2698	5	NNC	ENSMUSG00000066892.15	novel	3756	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.308873044136	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556044	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20553319_20553393_20553499_20554435_20555490_20555595_20555868
ES.34497.6	chr9	-	1910	5	NNC	ENSMUSG00000066892.15	novel	3756	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.308873044136	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556031	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20550495_20553319_20553393_20553499_20553660_20555490_20555595_20555868
ES.34497.7	chr9	-	1783	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	-10	-1012	-1	0	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556064	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
ES.34497.8	chr9	-	3754	4	FSM	ENSMUSG00000066892.15	ENSMUST00000148631.8	3756	4	-1	3	-1	0	multi-exon	FALSE	canonical	3	9	junction_3	35.3270434653114	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556044	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20550495_20553319_20553393_20553499_20555595_20555868
ES.34497.9	chr9	-	2087	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	-31	0	-31	0	multi-exon	FALSE	canonical	3	47	junction_2	23	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556094	20549084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20550495_20553319_20553393_20555490
ES.34498.1	chr9	+	1038	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	-62	2867	-62	-2867	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGGTGTGGGGCCCT	NA	False	NA	50	True	ATTAAA	-40	NA	20563328	20575013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ES.34498.10	chr9	+	1164	5	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	31	-2894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1356.08561215729	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563421	20574986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20563494_20566657_20566877_20573073_20573320_20573593_20573705_20574470
ES.34498.11	chr9	+	3808	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	34	1	34	-1	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTTTGTCAGAGGGAT	NA	False	NA	NA	False	NA	NA	NA	20563424	20577879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ES.34498.13	chr9	+	3356	2	ISM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	7475	2893	7475	-2893	3prime_fragment	FALSE	canonical	3	2805	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGGTCCTGTATCATT	NA	False	NA	24	True	ATTAAA	-14	NA	20570865	20574987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20573705_20574470
ES.34498.2	chr9	+	647	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	4	3192	4	-3192	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCCGCTCCCTGTTTG	NA	False	NA	NA	False	GGGGCT	-4	NA	20563394	20574688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ES.34498.4	chr9	+	1709	3	ISM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	6	2894	6	-2894	intron_retention	FALSE	canonical	3	2626	junction_2	36.5	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGGTCCTGTATCAT	NA	False	NA	23	True	ATTAAA	-13	NA	20563396	20574986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20563494_20566657_20566877_20573593
ES.34498.5	chr9	+	2314	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	8	1521	8	-1521	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCGTCCCCAGCATAT	NA	False	NA	NA	False	GATAAA	-17	NA	20563398	20576359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ES.34498.6	chr9	+	4115	3	NIC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	19	-2873	intron_retention	FALSE	canonical	3	2626	junction_1	89.5	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCCTGGTGAGGTGTGG	NA	False	NA	44	True	ATTAAA	-34	NA	20563409	20575007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20566877_20573593_20573705_20574470
ES.34498.7	chr9	+	4992	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	20	-1169	20	1169	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAATCCATGCAC	NA	False	NA	NA	False	AATAAA	-4	NA	20563410	20579049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ES.34498.9	chr9	+	4327	4	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	31	-2895	intron_retention	FALSE	canonical	0	0	junction_2	1303.16699705841	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGTGGTCCTGTATCA	NA	False	NA	22	True	ATTAAA	-12	NA	20563421	20574985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20566877_20573073_20573320_20573593_20573705_20574470
ES.34499.1	chr9	+	162	1	Intergenic	novelGene_28070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAATATAATTAA	8302	False	NA	NA	False	NA	NA	NA	20589849	20590011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20589800_20590000
ES.345.1	chr1	-	178	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAGGAAGAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	38948505	38948327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_38948300_38948500
ES.3450.1	chr10	-	4915	11	NNC	ENSMUSG00000034591.6	novel	4742	11	NA	NA	-4030	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.35646599662505	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTGTGCCATTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	83162777	83066712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83069615_83090646_83090796_83091874_83092007_83117233_83117314_83119585_83119734_83133017_83133165_83137025_83137171_83140167_83140240_83149278_83149387_83151918_83152654_83162480
ES.3450.2	chr10	-	4802	11	NIC	ENSMUSG00000034591.6	novel	4742	11	NA	NA	31	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.26885775404495	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTGTGCCATTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	83173273	83066712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83069615_83090646_83090796_83091874_83092007_83117233_83117314_83119585_83119734_83133017_83133165_83137025_83137171_83140167_83140240_83149278_83149387_83151918_83152654_83173089
ES.3450.3	chr10	-	4762	11	FSM	ENSMUSG00000034591.6	ENSMUST00000039956.6	4742	11	-21	1	-21	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.35646599662505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTGTGCCATTGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	83173767	83066712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83069615_83090646_83090796_83091874_83092007_83117233_83117314_83119585_83119734_83133017_83133165_83137025_83137171_83140167_83140240_83149278_83149387_83151918_83152654_83173623
ES.3450.4	chr10	-	2241	11	FSM	ENSMUSG00000034591.6	ENSMUST00000039956.6	4742	11	7	2494	7	-2494	multi-exon	FALSE	canonical	0	0	junction_1	1.35646599662505	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATACAAGCTCACATTC	NA	False	NA	NA	False	AATAAA	-16	NA	83173739	83069205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83069615_83090646_83090796_83091874_83092007_83117233_83117314_83119585_83119734_83133017_83133165_83137025_83137171_83140167_83140240_83149278_83149387_83151918_83152654_83173623
ES.34500.1	chr9	-	1915	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	15	-35	15	32	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGTCTCCACGGAGTC	NA	False	NA	32	True	NA	NA	NA	20657630	20578953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
ES.34501.1	chr9	-	1165	1	Intergenic	novelGene_28071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGTGGCACATGCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20680710	20679545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20679500_20680700
ES.34502.1	chr9	-	6121	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	2	-4	2	4	multi-exon	TRUE	canonical	1	1	junction_62	3.84063264799209	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTCTTTAAAATGATT	1605	False	NA	2	True	AATAAA	-25	NA	20726361	20681341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
ES.34502.4	chr9	-	5943	68	NNC	ENSMUSG00000004098.8	novel	6119	67	NA	NA	43	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.22332679244834	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTCTCTTTTTCTCT	1646	False	NA	-9	True	AATAAA	-14	NA	20726320	20681352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20681995_20682121_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696867_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
ES.34502.5	chr9	-	6003	47	NIC	ENSMUSG00000004098.8	novel	6119	67	NA	NA	15971	-8	intron_retention	FALSE	canonical	0	0	junction_36	3.97493327213909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTTCTCTTTTTCTC	NA	False	NA	-10	True	AATAAA	-13	NA	20710392	20681353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331
ES.34502.6	chr9	-	5798	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	14	307	14	-307	multi-exon	FALSE	canonical	1	1	junction_62	3.84063264799209	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTGCTGCACAATCTC	1617	False	NA	NA	False	NA	NA	NA	20726349	20681652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
ES.34503.1	chr9	+	177	1	Intergenic	novelGene_28072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAAAAAGAAATTTA	NA	False	NA	NA	False	NA	NA	NA	20764301	20764478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20764300_20764500
ES.34504.1	chr9	+	3719	5	NIC	ENSMUSG00000038884.15	novel	1043	6	NA	NA	-83	-121	intron_retention	FALSE	canonical	3	88	junction_3	15.833114033569	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTCTTTGTGCAAAGCT	NA	False	NA	NA	False	AATAAA	-12	NA	20779854	20785482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.10	chr9	+	4888	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	-3	1559	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTCACCAAAGCAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	20779972	20787162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.11	chr9	+	3175	7	FSM	ENSMUSG00000038884.15	ENSMUST00000175820.8	3210	7	27	8	5	-8	multi-exon	FALSE	canonical	3	59	junction_5	23.9704679414761	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTTCAGAGTAATAGCC	NA	False	NA	11	True	AATAAA	-20	NA	20779980	20785595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.12	chr9	+	3064	7	FSM	ENSMUSG00000038884.15	ENSMUST00000175820.8	3210	7	27	119	5	-119	multi-exon	FALSE	canonical	3	59	junction_5	23.9704679414761	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20779980	20785484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.14	chr9	+	1749	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	28	-6	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGAGTAATAGCCTT	NA	False	NA	13	True	AATAAA	-22	NA	20780003	20785597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.15	chr9	+	3064	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	35	-119	intron_retention	FALSE	canonical	3	7	junction_3	41.2812171439856	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20780010	20785484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.16	chr9	+	1982	8	NNC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_4	50.3866681427797	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20780024	20785603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20781306_20782492_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.17	chr9	+	3071	7	NNC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	139	-11	intron_retention	FALSE	canonical	0	0	junction_3	43.7442059655397	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTCTTCAGAGTAATA	NA	False	NA	8	True	AATAAA	-17	NA	20780114	20785592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781054_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.18	chr9	+	3239	9	NNC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	154	1496	intron_retention	FALSE	canonical	1	1	junction_8	48.411646326065	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGGAAGAGCCACTTC	NA	False	NA	NA	False	AATAAA	-21	NA	20780129	20787099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837_20785277_20786491_20786741_20786816
ES.34504.19	chr9	+	4370	9	NNC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	189	1555	intron_retention	FALSE	canonical	1	1	junction_8	47.4590283823847	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAACTCCTCACCAAAGC	NA	False	NA	NA	False	AATAAA	-13	NA	20780164	20787158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837_20786741_20786816
ES.34504.2	chr9	+	1692	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	-7	-2	-7	2	multi-exon	TRUE	canonical	3	59	junction_6	22.3469853694417	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATAGCCTTAATTCCCT	NA	False	NA	21	True	AATAAA	-30	NA	20779930	20785605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.21	chr9	+	2925	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	-55	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	40.6301065166651	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAGAGTAATAGCCTT	NA	False	NA	13	True	AATAAA	-22	NA	20780517	20785597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780750_20780899_20780950_20781057_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.3	chr9	+	3252	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	-7	-119	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20779930	20785484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.4	chr9	+	3393	5	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	3	-118	intron_retention	FALSE	canonical	3	88	junction_3	17.1227188261678	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTGCAAAGCTTTT	NA	False	NA	-99	True	AATAAA	-15	NA	20779940	20785485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.5	chr9	+	1698	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	4	-119	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTTGTGCAAAGCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	20779941	20785484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.6	chr9	+	1566	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	15	102	-1	-102	multi-exon	FALSE	canonical	3	59	junction_6	22.3469853694417	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAAGCATTCCTCAAC	NA	False	NA	-83	True	AATAAA	-31	NA	20779952	20785501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.7	chr9	+	3214	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	24	-1555	8	1555	multi-exon	FALSE	canonical	3	59	junction_6	22.3469853694417	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAACTCCTCACCAAAGC	NA	False	NA	NA	False	AATAAA	-13	NA	20779961	20787158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ES.34504.8	chr9	+	3339	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	9	0	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779962	20785603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
ES.34504.9	chr9	+	3081	8	NNC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.1872851131396	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTTCAGAGTAATAGCC	NA	False	NA	11	True	AATAAA	-20	NA	20779962	20785595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20780233_20780625_20780750_20780899_20780950_20781057_20782532_20782675_20782822_20784163_20784268_20784405_20784561_20784837
ES.34505.1	chr9	-	2281	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1784	-5	1784	5	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTTCCTGTGTGCA	NA	False	NA	0	True	NA	NA	NA	20789239	20785098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
ES.34505.2	chr9	-	1254	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1328	-1	1328	1	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTCTGTCTTCCTGTG	NA	False	NA	-4	True	NA	NA	NA	20789695	20785102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
ES.34505.3	chr9	-	1046	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1867	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	50.2910280268757	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGTGTCTGTCTTCCTG	NA	False	NA	-6	True	NA	NA	NA	20789156	20785104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789011
ES.34505.4	chr9	-	1657	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1683	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	45.3176290200624	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACTGTGTCTGTCTTCC	NA	False	NA	-8	True	NA	NA	NA	20789340	20785106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20788582
ES.34505.5	chr9	-	1172	4	NIC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1483	-3	intron_retention	FALSE	canonical	3	59	junction_3	31.4360020076062	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACTGTGTCTGTCTTCC	NA	False	NA	-8	True	NA	NA	NA	20789540	20785106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20785369_20786461_20786998_20787687_20787866_20789344
ES.34506.1	chr9	+	3069	10	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-765	0	intron_retention	FALSE	non_canonical	0	0	junction_2	278.309491105686	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20798705	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.10	chr9	+	1680	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	785	junction_2	62.1034580854628	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799543	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20803044_20803127
ES.34506.11	chr9	+	3000	8	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-1	3	intron_retention	FALSE	non_canonical	0	0	junction_2	311.638461381526	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTCTTCACTCTGGTT	NA	False	NA	16	True	AATAAA	-17	NA	20799544	20803477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800736_20800929_20800981_20801066_20802012_20802200_20802662_20802746_20803044_20803127
ES.34506.12	chr9	+	2149	11	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	264.391452206761	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799544	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.13	chr9	+	1680	10	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	74	0	-1	0	intron_retention	FALSE	canonical	3	766	junction_9	67.2856450120779	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799544	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746
ES.34506.14	chr9	+	3189	7	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	333.185967424934	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799545	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800981_20801066_20802012_20802200_20802662_20802746_20803044_20803127
ES.34506.15	chr9	+	3462	5	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	396.41802431272	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799546	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800981_20801066_20803044_20803127
ES.34506.16	chr9	+	2288	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	3	-1	intron_retention	FALSE	canonical	3	766	junction_8	67.6928429573934	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799548	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.17	chr9	+	1865	9	FSM	ENSMUSG00000004100.13	ENSMUST00000147780.2	1834	9	-31	0	4	0	multi-exon	FALSE	canonical	3	766	junction_7	71.605582010064	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799549	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.18	chr9	+	3545	4	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	426.109792841652	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799550	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20802662_20802746
ES.34506.19	chr9	+	1949	8	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_5	297.821957497003	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799554	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800633_20801238_20801934_20802012_20802200_20802313_20802378_20802662_20802746_20803044_20803127
ES.34506.2	chr9	+	1658	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	15	-3	15	3	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTCTTCACTCTGGTT	NA	False	NA	16	True	AATAAA	-17	NA	20799485	20803477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.20	chr9	+	2413	9	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	293.332043084284	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799554	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.21	chr9	+	2636	7	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	766	junction_5	78.7176741413402	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799554	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800981_20801066_20802012_20802200_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.22	chr9	+	3542	4	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	446.910132651595	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799555	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20803044_20803127
ES.34506.23	chr9	+	1461	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	278.247691415001	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799555	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802582_20802662_20802746_20803044_20803127
ES.34506.24	chr9	+	1861	9	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	766	junction_7	47.3984111020612	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799559	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.25	chr9	+	2603	6	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	785	junction_1	73.7672013838128	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799560	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20802012_20802200_20802503_20802582
ES.34506.26	chr9	+	1752	9	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	785	junction_1	64.7528956881466	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799562	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20803044_20803127
ES.34506.27	chr9	+	2200	10	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	278.599052580524	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799562	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.29	chr9	+	3106	8	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	382.636503587348	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799563	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20802012_20802203_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.3	chr9	+	1780	10	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-35	-1	intron_retention	FALSE	canonical	0	0	junction_6	271.932635085771	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799510	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802133_20802309_20802378_20802503_20802582_20802662_20802746
ES.34506.30	chr9	+	1665	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	766	junction_8	68.2725113238786	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799564	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.31	chr9	+	3514	3	Fusion	ENSMUSG00000004100.13_ENSMUSG00000077702.3	novel	528	2	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	445	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799564	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_20800400_20800605_20802012_20802200
ES.34506.32	chr9	+	2533	8	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	293.247544659763	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799564	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800633_20800977_20801066_20802012_20802200_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.33	chr9	+	3187	7	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	313.832448219676	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799564	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.34	chr9	+	1625	12	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	334.989083330208	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTTGAGTCTTCACT	NA	False	NA	10	True	AATAAA	-11	NA	20799564	20803471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800252_20800302_20800630_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.35	chr9	+	3447	5	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	391.555471804443	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799564	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20802662_20802746_20803044_20803127
ES.34506.36	chr9	+	1817	11	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	347.638044523323	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799568	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800252_20800302_20800630_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.37	chr9	+	2592	9	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	377.529717373348	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTTGAGTCTTCACT	NA	False	NA	10	True	AATAAA	-11	NA	20799568	20803471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800252_20800302_20800630_20800981_20801066_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.38	chr9	+	2498	6	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	401.890333300019	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799568	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20801238_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.39	chr9	+	2558	7	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	336.658291975046	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799568	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800400_20800605_20800981_20801066_20801238_20801934_20802012_20802200_20802662_20802746_20803044_20803127
ES.34506.4	chr9	+	2441	9	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	293.948523342098	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799531	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20803044_20803127
ES.34506.41	chr9	+	2443	7	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	339.521067911191	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799573	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800404_20800609_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20803044_20803127
ES.34506.42	chr9	+	3692	2	Fusion	ENSMUSG00000004100.13_ENSMUSG00000077702.3	novel	528	2	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799574	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_20800401_20800606
ES.34506.43	chr9	+	3049	3	NIC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	785	junction_1	106	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799579	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800981_20801066
ES.34506.44	chr9	+	1717	9	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	766	junction_7	68.7749954561976	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799581	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.45	chr9	+	3000	9	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	4	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	290.376668096801	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799584	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800981_20801066_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.46	chr9	+	3237	6	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	363.746615104526	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799590	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20802012_20802200_20802503_20802582_20803044_20803127
ES.34506.47	chr9	+	2353	8	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	295.459310365459	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799590	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20800401_20800606_20800736_20800929_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746
ES.34506.48	chr9	+	2765	5	NIC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	785	junction_1	74.9549864918939	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799590	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800981_20801066_20802012_20802200_20803044_20803127
ES.34506.49	chr9	+	3383	4	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	419.550023504018	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799592	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20802365_20802572_20803044_20803127
ES.34506.5	chr9	+	1685	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	766	junction_8	67.5113159239085	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799535	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.50	chr9	+	1675	11	NNC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	14	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	349.392687387701	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTTGAGTCTTCACT	NA	False	NA	10	True	AATAAA	-11	NA	20799594	20803471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20799614_20799702_20799874_20800252_20800302_20800630_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.51	chr9	+	2509	6	NNC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	121	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	368.532440905818	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTGAGTCTTCACTC	NA	False	NA	11	True	AATAAA	-12	NA	20799701	20803472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20800401_20800606_20800981_20801066_20801238_20801934_20802012_20802200_20803044_20803127
ES.34506.52	chr9	+	1721	9	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	121	-1	intron_retention	FALSE	canonical	3	766	junction_7	72.4075919707319	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799701	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.53	chr9	+	2444	7	Fusion	ENSMUSG00000004100.13_ENSMUSG00000077702.3	novel	528	2	NA	NA	-470	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	331.710591731206	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20800309	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_20800401_20800606_20800981_20801066_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34506.54	chr9	+	1093	5	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	2589	3	126	-3	3prime_fragment	FALSE	canonical	3	766	junction_3	46.2567562632747	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTTGAGTCTTCACT	NA	False	NA	10	True	AATAAA	-11	NA	20802059	20803471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ES.34506.6	chr9	+	2645	7	NIC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	766	junction_5	77.5831095592906	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799535	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20802012_20802200_20802662_20802746_20803044_20803127
ES.34506.8	chr9	+	1943	8	NIC	ENSMUSG00000004100.13	novel	1834	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	766	junction_6	72.3517484944495	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGAGTCTTCACTCT	NA	False	NA	12	True	AATAAA	-13	NA	20799540	20803473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802662_20802746_20803044_20803127
ES.34506.9	chr9	+	2376	9	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	766	junction_7	70.7173069340172	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799541	20803474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ES.34507.1	chr9	-	167	1	Intergenic	novelGene_28073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGAGTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	20798781	20798614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20798600_20798800
ES.34508.1	chr9	-	3157	6	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	6	893	intron_retention	FALSE	canonical	3	2349	junction_1	188.948246882579	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAAAAAGGGAAA	5162	False	NA	NA	False	NA	NA	NA	20809896	20804751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20807314_20807411_20807517_20809002_20809063_20809183
ES.34508.12	chr9	-	965	10	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	826.777874837606	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5167	False	NA	-2	True	AGTAAA	-15	NA	20809891	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.13	chr9	-	2521	9	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_8	882.703013122194	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5157	False	NA	-2	True	AGTAAA	-15	NA	20809901	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20809063_20809183_20809273_20809379_20809464_20809839
ES.34508.14	chr9	-	1722	1	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	703	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	7691	False	NA	-2	True	AGTAAA	-15	NA	20807367	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805600_20807400
ES.34508.16	chr9	-	1045	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	798.250844033378	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5186	False	NA	-2	True	AGTAAA	-15	NA	20809872	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806485_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.17	chr9	-	1236	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	800.686511688563	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5162	False	NA	-2	True	AGTAAA	-15	NA	20809896	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807676_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.19	chr9	-	1063	11	NNC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	804.599925428781	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCCTGCTT	5162	False	NA	-8	True	AGTAAA	-9	NA	20809896	20805651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809055_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.2	chr9	-	1115	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	-14	0	-14	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5125	False	NA	-1	True	AGTAAA	-16	NA	20809933	20805644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.20	chr9	-	1515	8	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	10	-7	intron_retention	FALSE	canonical	3	2349	junction_1	169.940685930986	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCCTGCTT	5166	False	NA	-8	True	AGTAAA	-9	NA	20809892	20805651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
ES.34508.3	chr9	-	1428	9	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	1	1	1	-1	intron_retention	FALSE	canonical	3	2349	junction_1	159.342398626354	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5140	False	NA	-2	True	AGTAAA	-15	NA	20809918	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
ES.34508.4	chr9	-	1200	10	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	2	-1	intron_retention	FALSE	canonical	3	2112	junction_9	222.087625905287	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5158	False	NA	-2	True	AGTAAA	-15	NA	20809900	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.5	chr9	-	1272	10	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	2112	junction_9	208.185695835754	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5157	False	NA	-2	True	AGTAAA	-15	NA	20809901	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ES.34508.7	chr9	-	3013	7	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	2349	junction_1	175.852921499758	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5162	False	NA	-2	True	AGTAAA	-15	NA	20809896	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20809273_20809379
ES.34508.9	chr9	-	2154	7	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	8	-1	intron_retention	FALSE	canonical	3	2349	junction_1	180.377382174152	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCCTGCTTATTTTC	5164	False	NA	-2	True	AGTAAA	-15	NA	20809894	20805645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20805739_20805928_20806036_20806128_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379
ES.34509.1	chr9	+	4591	19	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCAAAAGACCTAAAAACA	4581	False	NA	NA	False	NA	NA	NA	20823079	20841838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823603_20823866_20825388_20827019_20827237_20829201_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320_20835438_20837740_20837848_20837923_20838010_20838103_20838467_20840342_20840426_20841420
ES.34509.10	chr9	+	5946	12	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20825388_20827019_20827237_20828592_20828765_20829199_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320
ES.34509.11	chr9	+	8013	10	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20827237_20828592_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320
ES.34509.12	chr9	+	7341	13	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320
ES.34509.13	chr9	+	3090	25	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGGTAAAGTAGAATATT	4581	False	NA	NA	False	NA	NA	NA	20823079	20847919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823603_20823866_20823952_20825191_20825388_20827019_20827237_20828592_20828765_20829199_20829337_20829411_20829616_20829729_20829847_20831135_20831283_20831406_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320_20835438_20837740_20837848_20837923_20838010_20838103_20838145_20838402_20838467_20840342_20840426_20841420_20841461_20843409_20843496_20845814_20845855_20847837
ES.34509.14	chr9	+	3784	31	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGGCGGCGCAAGCGG	4581	False	NA	NA	False	NA	NA	NA	20823079	20864154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20823952_20825191_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320_20835438_20837740_20837848_20837923_20838010_20838103_20838145_20838402_20838467_20840342_20840426_20841420_20841461_20843409_20843496_20845814_20845855_20847837_20847925_20849346_20849443_20851771_20851848_20852668_20852879_20852993_20853105_20853880_20853920_20864005
ES.34509.15	chr9	+	3098	25	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGGTAAAGTAGAATATT	4584	False	NA	NA	False	NA	NA	NA	20823082	20847919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20823952_20825191_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829611_20829720_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834217_20835000_20835093_20835320_20835438_20837740_20837848_20837923_20838010_20838103_20838145_20838402_20838467_20840342_20840426_20841420_20841461_20843409_20843496_20845814_20845855_20847837
ES.34509.16	chr9	+	4503	11	Antisense	novelGene_ENSMUSG00000004099.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	7836	False	NA	NA	False	NA	NA	NA	20826334	20837143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20834218_20835000_20835093_20835320
ES.34509.17	chr9	+	3598	11	Antisense	novelGene_ENSMUSG00000004099.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	8685	False	NA	NA	False	NA	NA	NA	20827183	20837143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000
ES.34509.2	chr9	+	6219	11	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	4581	False	NA	NA	False	NA	NA	NA	20823079	20837143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20834218_20835000_20835093_20835320
ES.34509.3	chr9	+	6372	12	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20825388_20827019_20827237_20828592_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000
ES.34509.4	chr9	+	4206	16	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20823952_20825191_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320
ES.34509.5	chr9	+	8184	8	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20827237_20828592_20828765_20829199_20829616_20829729_20829847_20831135_20831281_20831399_20831502_20833316_20834218_20835000
ES.34509.6	chr9	+	5186	14	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	4581	False	NA	NA	False	NA	NA	NA	20823079	20837143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20823952_20825191_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061
ES.34509.7	chr9	+	5958	13	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20834218_20835000
ES.34509.8	chr9	+	5446	15	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20823315_20823478_20823604_20823866_20825388_20827019_20827237_20828592_20828765_20829199_20829338_20829410_20829616_20829729_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20833778_20834061_20834218_20835000_20835093_20835320
ES.34509.9	chr9	+	7547	11	Antisense	novelGene_ENSMUSG00000099147.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAGAAAAATGATGCTCT	4581	False	NA	NA	False	NA	NA	NA	20823079	20837174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20827237_20828592_20828765_20829199_20829338_20829410_20829463_20829818_20829847_20831135_20831281_20831399_20831501_20833316_20833496_20833588_20834218_20835000_20835093_20835320
ES.3451.1	chr10	+	1643	4	NNC	ENSMUSG00000112134.2	novel	603	4	NA	NA	-401	1140	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.18544972870135	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATGAATT	NA	False	NA	NA	False	NA	NA	NA	83179975	83188083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83180065_83185918_83186165_83186401_83186496_83186869
ES.3451.2	chr10	+	1825	5	NNC	ENSMUSG00000112134.2	novel	603	4	NA	NA	-381	1140	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.03112887414927	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATGAATT	NA	False	NA	NA	False	NA	NA	NA	83179995	83188083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83180065_83180363_83180563_83185918_83186165_83186398_83186496_83186869
ES.3451.3	chr10	+	745	2	NIC	ENSMUSG00000112134.2	novel	603	4	NA	NA	-88	397	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83180288	83187340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83180563_83186869
ES.3451.4	chr10	+	1424	2	NIC	ENSMUSG00000112134.2	novel	603	4	NA	NA	-49	1115	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	83180327	83188058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83180563_83186869
ES.34510.1	chr9	-	6438	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	21	1229	combination_of_known_junctions	TRUE	canonical	3	490	junction_35	108.724460496474	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCTGGCTGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	20864120	20817275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.10	chr9	-	4172	20	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-13884	3	intron_retention	FALSE	canonical	3	860	junction_15	74.8816980180133	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGTGATTGAGTTCTCT	NA	False	NA	-4	True	AATAAA	-20	NA	20834159	20818501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061
ES.34510.101	chr9	-	5349	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	221.710399812552	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864243	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818852_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852647_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.104	chr9	-	5224	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	184.541739830349	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864143	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835080_20835314_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.105	chr9	-	6022	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	490	junction_35	110.076386254323	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864158	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853916_20864003
ES.34510.108	chr9	-	3438	9	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-4942	-1	intron_retention	FALSE	canonical	3	874	junction_6	76.0834246074662	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20825217	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867
ES.34510.111	chr9	-	5093	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-5423	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	191.386758061867	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20853908	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829195_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878
ES.34510.118	chr9	-	2336	9	NNC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-4047	-1	intron_retention	FALSE	canonical	1	31	junction_3	324.600042359825	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20824322	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820497_20820582_20820988_20821167_20821435_20821603_20822712_20823312_20823475_20823605_20823867
ES.34510.119	chr9	-	5218	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	180.337335871253	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864124	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847924_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.12	chr9	-	5205	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-21	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	184.539788441424	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGTGATTGAGTTCTCT	NA	False	NA	-4	True	AATAAA	-20	NA	20864162	20818501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853054_20853878_20853916_20864003
ES.34510.121	chr9	-	5245	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	184.54027629059	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864148	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834223_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.122	chr9	-	4066	24	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	211.717291972637	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864141	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20863999
ES.34510.124	chr9	-	7272	36	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	-1	intron_retention	FALSE	canonical	3	490	junction_32	101.047873075395	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864141	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.128	chr9	-	4588	32	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	182.979059206841	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864124	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840404_20852840_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.129	chr9	-	5210	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	184.353921631878	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCTAGTGATTGAGT	NA	False	NA	-9	True	AATAAA	-15	NA	20864140	20818506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823588_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.131	chr9	-	5123	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	183.87092945341	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCTAGTGATTGAGT	NA	False	NA	-9	True	AATAAA	-15	NA	20864122	20818506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829816_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.134	chr9	-	9965	36	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-1	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	238.989221855851	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCTAGTGATTGAGT	NA	False	NA	-9	True	AATAAA	-15	NA	20864142	20818506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823594_20823867_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.138	chr9	-	5154	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	184.534056117119	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864116	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829249_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.139	chr9	-	5195	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	234.556900880559	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864120	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840353_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.14	chr9	-	5159	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	237.792123887284	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGTGATTGAGTTCTCT	NA	False	NA	-4	True	AATAAA	-20	NA	20864133	20818501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822789_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841454_20843405_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.141	chr9	-	5323	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	18	-3	intron_retention	FALSE	canonical	3	490	junction_34	109.532828263925	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864123	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.143	chr9	-	5745	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-3	-3	intron_retention	FALSE	canonical	1	3	junction_17	182.167759958902	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864144	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831429_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.145	chr9	-	5121	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.308734167618	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864127	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.147	chr9	-	5155	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	234.688449401645	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864133	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829276_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.148	chr9	-	4665	36	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	188.496296721052	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864158	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827260_20829816_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.149	chr9	-	5204	1	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-3436	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20823711	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818500_20823700
ES.34510.152	chr9	-	5280	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.532470549171	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864121	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821240_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.155	chr9	-	5257	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	188.312297708206	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20864161	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820056_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.156	chr9	-	5147	12	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-9511	-3	intron_retention	FALSE	canonical	3	896	junction_3	79.5188007292709	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCCAGCTAGTGATTGAG	NA	False	NA	-10	True	AATAAA	-14	NA	20829786	20818507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20820582_20820988_20821167_20821435_20821603_20822712_20823312_20823475_20823605_20823867_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730
ES.34510.157	chr9	-	5193	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_11	184.721023839192	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCCAGCTAGTGATTG	NA	False	NA	-12	True	AATAAA	-12	NA	20864124	20818509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825368_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.158	chr9	-	6147	37	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-42	4	intron_retention	FALSE	canonical	3	422	junction_33	110.650545456751	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCCAGCTAGTGATTG	NA	False	NA	-12	True	AATAAA	-12	NA	20864183	20818509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.166	chr9	-	3780	32	ISM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	134	4569	0	-4257	5prime_fragment	FALSE	canonical	3	422	junction_28	123.176995906295	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTACTCCAAGTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	20864141	20823073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.168	chr9	-	3933	29	NNC	ENSMUSG00000004099.17	novel	607	9	NA	NA	60	-6861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	254.647182391638	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTGAAGTGACCTGG	NA	False	NA	NA	False	TTTAAA	-1	NA	20863841	20825677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20825917_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ES.34510.169	chr9	-	2424	10	ISM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	128	23374	-6	-1492	5prime_fragment	FALSE	canonical	3	422	junction_6	156.132975930261	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGTGGTTTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	20864147	20841878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.17	chr9	-	5206	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	275.615749824364	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGTGATTGAGTTCTCT	NA	False	NA	-4	True	AATAAA	-20	NA	20864122	20818501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823600_20823865_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833499_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837841_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.2	chr9	-	6336	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	567	intron_retention	FALSE	non_canonical	0	0	junction_29	182.726489735704	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTGCCCAGGCTAG	NA	False	NA	NA	False	AATATA	-22	NA	20864141	20817937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.23	chr9	-	3130	18	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	323.433376120844	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTAGTGATTGAGTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20864111	20818503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20864003
ES.34510.27	chr9	-	5243	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	235.217661814564	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTAGTGATTGAGTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20864160	20818503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843409_20843496_20845814_20845856_20847838_20847942_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.28	chr9	-	5132	37	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	231.499773351354	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTAGTGATTGAGTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20864141	20818503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852647_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.3	chr9	-	5285	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	88	-6	-46	6	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGATTGAGTTCTCTGGC	NA	False	NA	-1	True	AATAAA	-23	NA	20864187	20818498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.32	chr9	-	5191	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	232.057448231636	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTAGTGATTGAGTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20864122	20818503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828600_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834201_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.33	chr9	-	5238	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	184.353921631878	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864160	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823594_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.34	chr9	-	5216	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	184.48982585735	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864121	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843404_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.38	chr9	-	5242	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	233.925392668646	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864149	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818852_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831397_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.4	chr9	-	5201	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	235.638904286403	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTGAGTTCTCTG	NA	False	NA	-3	True	AATAAA	-21	NA	20864141	20818500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825368_20827026_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838459_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.47	chr9	-	5836	39	NNC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	236.710210350569	1135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20863883	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843411_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ES.34510.48	chr9	-	5298	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	26	0	intron_retention	FALSE	canonical	3	490	junction_34	110.179692528736	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864115	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.50	chr9	-	6713	29	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	5012	0	intron_retention	FALSE	canonical	3	860	junction_16	69.9778663986998	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20843473	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410
ES.34510.51	chr9	-	4032	25	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	293.065618244826	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864149	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823600_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833698_20851796_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.52	chr9	-	5503	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-7	0	intron_retention	FALSE	canonical	3	422	junction_34	117.733830866944	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864148	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.53	chr9	-	3869	18	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-13367	0	intron_retention	FALSE	canonical	3	860	junction_14	74.5054745904262	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20833642	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821603_20822712_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589
ES.34510.54	chr9	-	5239	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	188.85718416592	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864156	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821594_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.55	chr9	-	5837	39	FSM	ENSMUSG00000004099.17	ENSMUST00000216540.2	5543	39	18	-312	18	0	multi-exon	FALSE	canonical	2	13	junction_38	187.220863319369	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20863883	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ES.34510.56	chr9	-	5234	27	ISM	ENSMUSG00000004099.17	ENSMUST00000178110.3	5870	39	24442	0	9008	0	3prime_fragment	FALSE	canonical	3	860	junction_16	70.4060076780367	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20839477	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402
ES.34510.57	chr9	-	5540	38	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-12	0	intron_retention	TRUE	canonical	0	0	junction_8	185.60748974208	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864153	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823594_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.59	chr9	-	3616	31	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	194.524879871159	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864117	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821043_20829275_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.60	chr9	-	6479	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-6	0	intron_retention	FALSE	canonical	3	422	junction_34	115.128416248568	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864147	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.64	chr9	-	5779	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-6	0	intron_retention	FALSE	canonical	3	422	junction_34	109.55107277272	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864147	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.65	chr9	-	5192	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	180.00732518182	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864109	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818852_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.67	chr9	-	4603	36	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	192.998001470037	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864147	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827203_20829816_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.69	chr9	-	5194	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	191.391280762949	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864139	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20864003
ES.34510.7	chr9	-	4871	36	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_35	178.462343824307	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTGAGTTCTCTG	NA	False	NA	-3	True	AATAAA	-21	NA	20864134	20818500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20864003
ES.34510.70	chr9	-	5132	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	182.347146932602	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864116	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825265_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.72	chr9	-	5202	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	184.535495313154	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864121	20818504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847846_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.78	chr9	-	7740	38	NIC	ENSMUSG00000004099.17	novel	5543	39	NA	NA	63	-1	intron_retention	FALSE	canonical	2	13	junction_37	189.676973492283	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20863838	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ES.34510.8	chr9	-	5593	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-47	4	intron_retention	FALSE	canonical	3	422	junction_34	116.534755159012	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTGAGTTCTCTG	NA	False	NA	-3	True	AATAAA	-21	NA	20864188	20818500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.81	chr9	-	5131	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_3	180.015027073573	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864155	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820497_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.82	chr9	-	5252	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	171.041457124879	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864140	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852647_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.87	chr9	-	5387	38	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	19	-1	intron_retention	FALSE	canonical	3	422	junction_34	117.467736428068	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864122	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.88	chr9	-	5159	39	NNC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	184.201503538427	1137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20864137	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822789_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ES.34510.94	chr9	-	9768	26	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	28	-1	intron_retention	FALSE	canonical	3	859	junction_24	63.7262897084084	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20848457	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20825386_20827017_20829617_20829730_20831284_20831404_20831503_20833318_20833497_20833589_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838
ES.34510.97	chr9	-	2403	7	NIC	ENSMUSG00000004099.17	novel	5870	39	NA	NA	-3402	-1	intron_retention	FALSE	canonical	3	896	junction_4	82.4144337412379	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTAGTGATTGAGTT	NA	False	NA	-8	True	AATAAA	-16	NA	20823677	20818505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20818858_20819166_20819258_20819767_20820582_20820988_20821167_20821435_20821603_20822712_20823312_20823475
ES.34511.1	chr9	-	3018	3	FSM	ENSMUSG00000043895.7	ENSMUST00000214218.2	379	3	-107	-2532	-35	2298	multi-exon	FALSE	canonical	0	0	junction_2	9.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGGTTATGTGTGTGT	8059	False	NA	0	True	AATAAA	-20	NA	20888112	20877246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20879867_20886768_20886948_20887893
ES.34511.2	chr9	-	2968	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-165	3591	-165	2297	multi-exon	FALSE	canonical	3	250	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGGTTATGTGTGTG	7929	False	NA	-1	True	AATAAA	-19	NA	20888242	20877247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20879867_20887893
ES.34511.3	chr9	-	2658	3	NNC	ENSMUSG00000043895.7	novel	379	3	NA	NA	-30	2295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGGTGGTTATGTGTG	8136	False	NA	-3	True	AATAAA	-17	NA	20888035	20877249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20878975_20879075_20879867_20887893
ES.34511.4	chr9	-	3933	2	ISM	ENSMUSG00000043895.7	ENSMUST00000214218.2	379	3	-82	-2526	-10	2292	intron_retention	FALSE	canonical	3	19	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCTGGTGGTTATGT	8084	False	NA	-6	True	AATAAA	-14	NA	20888087	20877252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20879867_20886768
ES.34511.5	chr9	-	2662	3	NNC	ENSMUSG00000043895.7	novel	379	3	NA	NA	-14	2289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCTGCTGGTGGTTA	8152	False	NA	-9	True	AATAAA	-11	NA	20888019	20877255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20878841_20878915_20879867_20887893
ES.34511.6	chr9	-	2463	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	-12	3943	-12	1945	multi-exon	FALSE	canonical	3	250	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATATGTGTCTGTGTGT	8082	False	NA	NA	False	AATAGA	-25	NA	20888089	20877599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20879867_20887893
ES.34512.1	chr9	+	183	1	Intergenic	novelGene_28074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAGAAAACACA	9337	False	NA	NA	False	NA	NA	NA	20907237	20907420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20907200_20907400
ES.34513.1	chr9	+	1297	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	-13	4	-13	-4	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGGTCACTGCT	NA	False	NA	22	True	AATAAA	-22	NA	20914020	20920131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.10	chr9	+	1086	9	NNC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	333.559870937737	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914201	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919015_20919118_20919196_20919789
ES.34513.11	chr9	+	1706	8	ISM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	168	8	-9	0	intron_retention	FALSE	canonical	3	832	junction_5	84.6638009049527	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914201	20920127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118
ES.34513.12	chr9	+	1240	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	2	2	junction_4	353.193188738725	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914201	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917532_20918122_20918241_20918729_20918837_20918926_20919196_20919789
ES.34513.14	chr9	+	1855	7	FSM	ENSMUSG00000003299.11	ENSMUST00000216824.2	715	7	-3	-1137	-3	3	multi-exon	FALSE	canonical	3	12	junction_5	377.736423390114	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGAGCTGGTCACTGC	NA	False	NA	21	True	AATAAA	-21	NA	20914207	20920130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918659_20918837_20918926
ES.34513.15	chr9	+	1762	6	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	966	junction_4	56.2800142146393	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914208	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20919196_20919789
ES.34513.16	chr9	+	1247	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	1	-4	intron_retention	FALSE	canonical	3	12	junction_5	352.305004685614	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914214	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918659_20918837_20918926_20919196_20919789
ES.34513.17	chr9	+	1266	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	335.666035666405	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGAAAATGAGCTGGT	NA	False	NA	15	True	AATAAA	-15	NA	20914214	20920124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918559_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.19	chr9	+	1003	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	3	127	junction_5	294.9804813458	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGACTTGAAAATGAGCT	NA	False	NA	12	True	AATAAA	-12	NA	20914216	20920121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918153_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.2	chr9	+	1965	7	ISM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	-13	12	-13	-4	intron_retention	FALSE	canonical	3	832	junction_5	91.3316605686233	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914020	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926
ES.34513.21	chr9	+	1116	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	334.184455054391	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914243	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917532_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.3	chr9	+	1351	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	7	-4	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914040	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
ES.34513.4	chr9	+	1332	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	12	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	332.405249657703	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGACTTGAAAATGAGCT	NA	False	NA	12	True	AATAAA	-12	NA	20914045	20920121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918659_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.5	chr9	+	2384	5	FSM	ENSMUSG00000003299.11	ENSMUST00000213977.2	2317	5	-63	-4	-22	-4	multi-exon	FALSE	canonical	3	966	junction_4	55.0244263941025	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGGTCACTGCT	NA	False	NA	22	True	AATAAA	-22	NA	20914188	20920131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122
ES.34513.6	chr9	+	2416	5	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	967	junction_4	54.7106022631811	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914195	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20919196_20919789
ES.34513.7	chr9	+	1094	9	NIC	ENSMUSG00000003299.11	novel	815	9	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	334.687704248304	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914197	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918153_20918659_20918837_20918926_20919037_20919118_20919196_20919789
ES.34513.8	chr9	+	903	7	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-13	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	383.809305949365	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGGTCACTGCT	NA	False	NA	22	True	AATAAA	-22	NA	20914197	20920131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20919118_20919196_20919789
ES.34513.9	chr9	+	1681	7	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	918	junction_5	64.2668049791043	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	False	NA	14	True	AATAAA	-14	NA	20914199	20920123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918837_20918926_20919196_20919789
ES.34514.1	chr9	-	185	1	Intergenic	novelGene_28075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3195	False	NA	NA	False	NA	NA	NA	20922654	20922469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20922500_20922700
ES.34515.1	chr9	+	3776	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-1242	1	-1242	-1	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGAGTTTGTGTACA	NA	False	NA	15	True	AATAAA	-20	NA	20926038	20940112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ES.34515.10	chr9	+	2394	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	162.282076096599	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927280	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938510_20938632_20938727_20938977_20939066
ES.34515.11	chr9	+	4742	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.528034934712	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927282	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20928001_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ES.34515.12	chr9	+	3007	6	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	355	junction_3	37.2150507187616	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927282	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20938632_20938727_20938977_20939066
ES.34515.13	chr9	+	3479	5	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	2	-4	intron_retention	FALSE	non_canonical	3	19	junction_3	183.74642853672	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927282	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20930476_20936839_20937418_20937494_20938977_20939066
ES.34515.14	chr9	+	3102	5	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	2	-5	intron_retention	FALSE	canonical	3	355	junction_3	39.884207400925	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCTTGTGAGTTTGTG	NA	False	NA	11	True	AATAAA	-16	NA	20927282	20940108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20938977_20939066
ES.34515.15	chr9	+	2456	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	156.832890541352	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTGTCTTGTGAGTTT	NA	False	NA	8	True	AATAAA	-13	NA	20927282	20940105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938908_20939066
ES.34515.16	chr9	+	2522	1	Intergenic	novelGene_28077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAATATAGGAA	NA	False	NA	NA	False	NA	NA	NA	20933002	20935524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20933000_20935500
ES.34515.3	chr9	+	3717	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	-808	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	19	junction_3	156.318762647212	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGAGTTTGTGTAC	NA	False	NA	14	True	AATAAA	-19	NA	20926472	20940111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20930476_20936839_20937418_20937494_20937896_20938373_20938632_20938727_20938977_20939066
ES.34515.4	chr9	+	2620	6	ISM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-4	9	-4	-9	intron_retention	FALSE	canonical	3	355	junction_3	32.56009827995	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGTCTTGTGAGTT	NA	False	NA	7	True	AATAAA	-12	NA	20927276	20940104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727
ES.34515.5	chr9	+	2531	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	146.235445619575	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTGTGAGTTTGT	NA	False	NA	10	True	AATAAA	-15	NA	20927276	20940107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938975_20939066
ES.34515.6	chr9	+	3652	3	ISM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	-4	4	-4	-4	intron_retention	FALSE	canonical	3	431	junction_1	1	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927276	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_20927398_20930214_20930476_20936839
ES.34515.7	chr9	+	3466	5	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	431	junction_1	12.8354976529934	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTGAGTTTGTGT	NA	False	NA	12	True	AATAAA	-17	NA	20927276	20940109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20927398_20930214_20930476_20936839_20938632_20938727_20938977_20939066
ES.34515.8	chr9	+	5190	3	NNC	ENSMUSG00000037405.9	novel	2203	2	NA	NA	-4	3224	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	215.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAATATAGGAA	NA	False	NA	NA	False	NA	NA	NA	20927276	20935524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20927398_20930214_20934622_20934862
ES.34515.9	chr9	+	3553	4	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	431	junction_1	7.11805216802087	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCTTGTGAGTTTG	NA	False	NA	9	True	AATAAA	-14	NA	20927276	20940106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_20927398_20930214_20930476_20936839_20938632_20938727
ES.34516.1	chr9	-	2698	1	Intergenic	novelGene_28076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGTGAGCATAGCT	NA	False	NA	NA	False	NA	NA	NA	20927174	20924476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20924500_20927200
ES.34517.1	chr9	-	184	1	Intergenic	novelGene_28078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATCCAAAACCCAAAAA	6869	False	NA	NA	False	NA	NA	NA	20934923	20934739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20934700_20934900
ES.34518.1	chr9	+	1110	2	FSM	ENSMUSG00000001014.7	ENSMUST00000215077.2	1028	2	-85	3	-4	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTCTGCCTTACGGTT	NA	False	NA	NA	False	AATAAA	-11	NA	20940664	20941887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_20941120_20941232
ES.34519.1	chr9	+	2465	7	NNC	ENSMUSG00000032174.6	novel	2947	11	NA	NA	1357	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.372677996249965	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGGTCTTTGTCTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	20944725	20950330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_20945112_20945842_20946131_20946339_20946595_20946689_20946939_20947489_20947733_20947811_20947871_20949345
ES.3452.1	chr10	+	1023	1	Intergenic	novelGene_2661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83190529	83191552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83190500_83191600
ES.34520.1	chr9	-	1331	4	NNC	ENSMUSG00000097535.2	novel	1730	2	NA	NA	-1	273	intron_retention	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTAAGTTAGTACTTGT	3780	False	NA	NA	False	AAAAAG	-4	NA	20949079	20945312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20946267_20948029_20948228_20948359_20948406_20948946
ES.34520.2	chr9	-	1946	2	NNC	ENSMUSG00000097535.2	novel	1730	2	NA	NA	2	-140	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAAGTTTAGGTGCTTG	3783	False	NA	NA	False	AATACA	-20	NA	20949076	20945725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20946267_20947671
ES.34521.1	chr9	-	200	1	Intergenic	novelGene_28079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCTGGTAGGATGGTT	7619	False	NA	NA	False	AAGAAA	-13	NA	20971691	20971491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20971500_20971700
ES.34522.1	chr9	+	154	1	Intergenic	novelGene_28080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGTTCAT	2653	False	NA	NA	False	NA	NA	NA	20975620	20975774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_20975600_20975800
ES.34523.1	chr9	+	3172	1	Antisense	novelGene_ENSMUSG00000111497.2_AS_novelGene_ENSMUSG00000098907.3_AS_novelGene_ENSMUSG00000010205.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAACCAAATAAAAAGC	1799	False	NA	NA	False	NA	NA	NA	20985336	20988508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_20985300_20988500
ES.34524.1	chr9	-	5528	17	Fusion	ENSMUSG00000079681.4_ENSMUSG00000111497.2	novel	2988	17	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_6	216.461565583824	717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTTAATTATGTT	NA	False	NA	NA	False	AATAAA	-19	NA	21003295	20973690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20979222_20979325_20979414_20984370_20984615_20986586_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21003054
ES.34524.10	chr9	-	657	4	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.414075376836	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984825	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20979137_20979325_20979414_20984370_20984478_20984684
ES.34524.11	chr9	-	782	5	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.701222261734	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984816	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20979222_20979331_20979414_20984370_20984478_20984559_20984615_20984684
ES.34524.12	chr9	-	879	4	FSM	ENSMUSG00000079677.3	ENSMUST00000215631.2	681	4	-23	-175	-7	0	multi-exon	FALSE	canonical	3	225	junction_3	51.1881062574327	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984825	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20979222_20979325_20979414_20984370_20984615_20984684
ES.34524.13	chr9	-	2920	5	Fusion	ENSMUSG00000010205.12_ENSMUSG00000079677.3	novel	812	5	NA	NA	-2056	0	intron_retention	FALSE	canonical	3	216	junction_3	118.682349151001	698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20986966	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20986793_20986880
ES.34524.14	chr9	-	5904	2	FSM	ENSMUSG00000079677.3	ENSMUST00000215338.2	631	2	-5021	-252	-5	0	multi-exon	FALSE	canonical	3	331	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984823	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20979222_20979325
ES.34524.15	chr9	-	2932	16	NIC	ENSMUSG00000111497.2	novel	2988	17	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	134.565209305955	711	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCCGACATGTTTTGT	NA	False	NA	-9	True	AATAAA	-10	NA	21003300	20978817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20986586_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.16	chr9	-	4672	1	NIC	ENSMUSG00000111497.2	novel	2988	17	NA	NA	7831	-1330	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	20984817	20980145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20980100_20984800
ES.34524.17	chr9	-	1651	4	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	-6	-2898	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.009614940158	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCAATGGCTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	20984824	20982022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20983372_20984370_20984478_20984559_20984615_20984684
ES.34524.18	chr9	-	4351	10	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	2	intron_retention	FALSE	canonical	3	465	junction_7	30.6630432642003	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGCTGGTTCTTGAT	NA	False	NA	0	True	ATTAAA	-33	NA	21003293	20985451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.19	chr9	-	3521	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	-51	0	-51	0	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003355	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.2	chr9	-	1111	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	-106	5	-106	-3	multi-exon	FALSE	canonical	3	10	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTATTTTTAATTAT	815	False	NA	NA	False	AATAAA	-16	NA	20978495	20973693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
ES.34524.20	chr9	-	3548	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	7	0	intron_retention	FALSE	canonical	3	40	junction_6	135.301194463096	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003297	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991465_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.21	chr9	-	3396	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_11	141.290042228948	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003297	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21003054
ES.34524.22	chr9	-	4879	9	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	427	junction_4	41.346100178856	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003293	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987938_20990504_20990811_20990896_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.25	chr9	-	3998	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	427	junction_5	36.2174333621095	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003299	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.26	chr9	-	3308	11	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	186.630115469074	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003293	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21003054
ES.34524.27	chr9	-	3485	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	142.35487249203	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003299	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991488_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.28	chr9	-	3306	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	142.294295973755	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003282	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992530_20997540_20998011_21001545_21001613_21003054
ES.34524.29	chr9	-	4350	12	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_5	196.50495756369	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003282	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20988641_20988740_20990504_20990811_20990896_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.3	chr9	-	2647	14	NIC	ENSMUSG00000111497.2	novel	2988	17	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	137.908339338749	711	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTTGTGTCCTTGGT	NA	False	NA	0	True	AATAAA	-19	NA	21003296	20978808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20979222_20979325_20979414_20984370_20984478_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.30	chr9	-	3467	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	142.622948909198	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003295	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20991994_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.31	chr9	-	4578	10	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	13	0	intron_retention	FALSE	canonical	1	3	junction_7	162.653536203509	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003291	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987938_20990504_20990811_20990896_20992114_20992270_20992401_20992479_20992530_20997540_20998011_21001545_21001613_21003054
ES.34524.32	chr9	-	3375	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	142.613967764917	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003293	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.33	chr9	-	3175	12	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	310	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	185.898488250669	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21002994	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21002955
ES.34524.34	chr9	-	3842	11	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	416	junction_5	39.1377056046979	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003293	20985453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.35	chr9	-	4600	10	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	9	-10	intron_retention	FALSE	canonical	3	427	junction_4	38.9817937877874	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003295	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987938_20990504_20990811_20990896_20991109_20991379_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.36	chr9	-	4070	11	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-10	intron_retention	FALSE	canonical	3	427	junction_4	35.00699930014	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003293	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.38	chr9	-	4254	11	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	10	-10	intron_retention	FALSE	canonical	3	427	junction_5	37.9678811628987	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003294	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.39	chr9	-	3467	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	142.614476435209	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003293	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987422_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.4	chr9	-	2769	15	NNC	ENSMUSG00000111497.2	novel	2988	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	143.230387409764	711	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTTGTGTCCTTGGT	NA	False	NA	0	True	AATAAA	-19	NA	21003293	20978808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984685_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.40	chr9	-	4139	11	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-10	intron_retention	FALSE	canonical	3	427	junction_5	37.5367819611644	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003293	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.41	chr9	-	3909	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	10	-10	intron_retention	FALSE	canonical	3	416	junction_6	43.5480166260889	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21003294	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20986793_20986880_20986965_20987259_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.43	chr9	-	3719	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	318	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	140.955863856583	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21002986	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21002477
ES.34524.46	chr9	-	3241	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	318	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	140.425444829474	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	False	NA	-12	True	ATTAAA	-21	NA	21002986	20985463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21002955
ES.34524.48	chr9	-	5727	3	NNC	ENSMUSG00000111497.2	novel	4234	12	NA	NA	-70	-6649	intron_retention	FALSE	non_canonical	0	0	junction_1	213.5	625	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCAGAGCTG	NA	False	NA	-13	True	ATTAAA	-20	NA	20992718	20985464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986936_20988376_20990811_20990896
ES.34524.49	chr9	-	3202	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	324	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	183.503614103071	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCAGAGCTG	NA	False	NA	-13	True	ATTAAA	-20	NA	21002980	20985464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001577_21001613_21002955
ES.34524.5	chr9	-	2141	10	NIC	ENSMUSG00000111497.2	novel	2988	17	NA	NA	896	-3	intron_retention	FALSE	canonical	1	2	junction_3	161.169338137115	704	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGACATGTTTTGTGTCCT	NA	False	NA	-4	True	AATAAA	-15	NA	20991752	20978812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20979222_20979325_20979414_20984370_20984615_20986586_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379
ES.34524.51	chr9	-	2717	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	11	742	11	-742	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTACTCCCCCATCCGT	NA	False	NA	NA	False	TTTAAA	-19	NA	21003293	20986195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.53	chr9	-	2421	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	9	1040	9	-1040	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGCTGGAGCTCAAGGA	NA	False	NA	-4	True	AATAGA	-29	NA	21003295	20986493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.54	chr9	-	2343	13	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	352	-1050	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	140.690632831993	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGACCAACCAGCTGG	NA	False	NA	-14	True	AATAGA	-19	NA	21002952	20986503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21002779
ES.34524.55	chr9	-	1980	10	ISM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	6	2326	6	-2326	5prime_fragment	FALSE	canonical	3	416	junction_4	41.253806408741	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGAAGTGCTTTCCC	NA	False	NA	NA	False	AATAAA	-27	NA	21003298	20987779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.56	chr9	-	2366	9	NNC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-2326	intron_retention	FALSE	canonical	1	3	junction_6	166.654536016875	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGAAGTGCTTTCCC	NA	False	NA	NA	False	AATAAA	-27	NA	21003293	20987779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992530_20997540_20998011_21001545_21001613_21003054
ES.34524.57	chr9	-	2508	9	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	11	-2326	intron_retention	FALSE	canonical	3	427	junction_2	35.5876997711288	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGAAGTGCTTTCCC	NA	False	NA	NA	False	AATAAA	-27	NA	21003293	20987779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ES.34524.58	chr9	-	178	1	Intergenic	novelGene_28081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	566	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	20995583	20995405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_20995400_20995600
ES.34524.6	chr9	-	4811	12	Fusion	ENSMUSG00000010205.12_ENSMUSG00000111692.2	novel	3470	13	NA	NA	5302	-5119	intron_retention	FALSE	canonical	3	331	junction_1	63.9886353546116	710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	False	NA	-6	True	AATAAA	-13	NA	20998002	20978814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_20979222_20979325_20979414_20984370_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540
ES.34524.7	chr9	-	799	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	13	0	-9	0	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984827	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
ES.34524.9	chr9	-	3092	5	ISM	ENSMUSG00000111497.2	ENSMUST00000217282.2	4234	12	5297	0	5297	0	3prime_fragment	FALSE	canonical	3	331	junction_1	104.286564331174	698	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20987351	20978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_20979222_20979325_20979414_20984370_20986793_20986880_20986965_20987259
ES.34525.1	chr9	-	159	1	Intergenic	novelGene_28082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21007124	21006965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21007000_21007100
ES.34526.1	chr9	-	139	1	Intergenic	novelGene_28083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATCCTGTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	21011391	21011252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21011300_21011400
ES.34527.1	chr9	+	2976	6	Antisense	novelGene_ENSMUSG00000032175.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTGGGCTGGCAAGAT	358	False	NA	NA	False	NA	NA	NA	21019463	21024193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21020191_21020532_21020727_21021431_21021528_21021747_21021901_21022303_21022457_21022540
ES.34527.2	chr9	+	177	2	Antisense	novelGene_ENSMUSG00000032175.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	4885	False	NA	NA	False	NA	NA	NA	21023990	21028968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21024116_21028916
ES.34528.1	chr9	-	4795	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-20	-5	-20	3	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTGCTTGCATTTTGG	NA	False	NA	1	True	NA	NA	NA	21042559	21015360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.10	chr9	-	4680	24	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-1366	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	21.9313243277164	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21040008	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031693_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
ES.34528.11	chr9	-	5357	23	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-27	0	intron_retention	FALSE	canonical	2	8	junction_19	21.5943537921948	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042566	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.12	chr9	-	4589	24	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_20	21.1438497405877	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042504	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.14	chr9	-	4827	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	1915	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	22.1158173034595	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21040561	21015364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21040433
ES.34528.15	chr9	-	4633	24	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	26.7276398074847	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21042473	21015364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042391
ES.34528.16	chr9	-	4637	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	27.687115936639	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21042464	21015364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031865_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042391
ES.34528.18	chr9	-	4063	19	NIC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	3287	0	intron_retention	FALSE	canonical	3	70	junction_18	11.551815634109	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	2430	False	NA	-4	True	NA	NA	NA	21035355	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272
ES.34528.19	chr9	-	4970	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-29	0	intron_retention	FALSE	canonical	0	0	junction_10	27.8193577687672	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042568	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21022792_21022862_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.2	chr9	-	4710	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	22.5018131985452	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTGCTTGCATTTTG	NA	False	NA	0	True	NA	NA	NA	21042509	21015361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033021_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.21	chr9	-	4557	24	NNC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	28.1114444333361	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042509	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031693_21031798_21032000_21032687_21033055_21035704_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.22	chr9	-	4923	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	22.1076517045318	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042507	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022862_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.23	chr9	-	5080	24	NIC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	-40	0	intron_retention	FALSE	canonical	3	60	junction_23	13.6152921920347	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042579	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.24	chr9	-	8270	23	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-1366	0	intron_retention	TRUE	non_canonical	0	0	junction_2	36.1922095630793	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21040008	21015365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016671_21018778_21018897_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21028776_21028987_21030298_21030472_21030524_21030592_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
ES.34528.26	chr9	-	3659	19	NNC	ENSMUSG00000032175.12	novel	4619	23	NA	NA	5696	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	22.9352954586981	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTTGGTGTTGCTTGC	4839	False	NA	-6	True	NA	NA	NA	21032946	21015367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031865_21032679
ES.34528.27	chr9	-	4967	3	NIC	ENSMUSG00000032175.12	novel	4444	20	NA	NA	17886	-2	intron_retention	FALSE	canonical	3	102	junction_2	8.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTTGGTGTTGCTTGC	7640	False	NA	-6	True	NA	NA	NA	21020756	21015367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21020189_21020530
ES.34528.29	chr9	-	3834	18	NNC	ENSMUSG00000032175.12	novel	4619	23	NA	NA	5698	-4	intron_retention	FALSE	canonical	0	0	junction_3	23.5724606194173	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTTTGGTGTTGCTT	4841	False	NA	-8	True	NA	NA	NA	21032944	21015369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019192_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687
ES.34528.3	chr9	-	4779	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	22.5485587122548	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTGCTTGCATTTTG	NA	False	NA	0	True	NA	NA	NA	21042508	21015361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027080_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.30	chr9	-	2671	12	ISM	ENSMUSG00000032175.12	ENSMUST00000213717.2	4444	20	15629	7	11795	-5	3prime_fragment	FALSE	canonical	1	1	junction_11	28.8919331588056	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGTTTTGGTGTTGCT	6482	False	NA	-9	True	NA	NA	NA	21026847	21015370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026667
ES.34528.31	chr9	-	5217	24	NNC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	3	-5	intron_retention	FALSE	canonical	2	3	junction_10	22.1587330819215	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGTTTTGGTGTTGCT	NA	False	NA	-9	True	NA	NA	NA	21042536	21015370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022862_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.33	chr9	-	2294	3	NNC	ENSMUSG00000032175.12	novel	4444	20	NA	NA	20836	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	59.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGTTTTGGTGTTGCT	NA	False	NA	-9	True	NA	NA	NA	21017806	21015370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21017683_21017744
ES.34528.34	chr9	-	3204	17	NNC	ENSMUSG00000032175.12	novel	4619	23	NA	NA	6978	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	24.3142672879526	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGTTTTGGTGTTGCT	6121	False	NA	-9	True	NA	NA	NA	21031664	21015370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21026974_21027130_21027327_21027428_21027538_21031555
ES.34528.36	chr9	-	5398	23	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-1366	-7	intron_retention	FALSE	canonical	3	64	junction_19	13.5568134191868	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTGCTGTTTTGGTGTTG	NA	False	NA	-11	True	NA	NA	NA	21040008	21015372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855
ES.34528.37	chr9	-	3662	21	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	21	-4260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	22.692014013745	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTGCTACTTCATA	NA	False	NA	NA	False	NA	NA	NA	21042507	21019625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038636_21039855_21040008_21042467
ES.34528.38	chr9	-	4232	16	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-27	-5443	intron_retention	FALSE	canonical	2	8	junction_12	23.48749076045	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACTTTTCAGACATGGG	NA	False	NA	NA	False	NA	NA	NA	21042566	21020808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027538_21031555_21031714_21031798_21033055_21035272_21035437_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.39	chr9	-	3804	18	NIC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	18	-5443	intron_retention	FALSE	canonical	3	60	junction_17	13.0588235294118	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACTTTTCAGACATGGG	NA	False	NA	NA	False	NA	NA	NA	21042510	21020808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.4	chr9	-	4829	25	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.7035083518315	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042460	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020528_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042333
ES.34528.40	chr9	-	2071	9	NIC	ENSMUSG00000032175.12	novel	4619	23	NA	NA	6978	-5443	intron_retention	FALSE	canonical	1	1	junction_5	29.7444847828971	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACTTTTCAGACATGGG	6121	False	NA	NA	False	NA	NA	NA	21031664	21020808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026667_21026845_21026939_21027327_21027428_21027538_21031555
ES.34528.41	chr9	-	168	1	Intergenic	novelGene_28084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCTAAAAAAAAAAAAAA	7250	False	NA	NA	False	NA	NA	NA	21021146	21020978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21021000_21021100
ES.34528.42	chr9	-	2046	9	ISM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	-29	15773	-29	3616	5prime_fragment	FALSE	canonical	3	60	junction_8	19.0591185525459	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21042568	21031138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.43	chr9	-	2904	6	NIC	ENSMUSG00000032175.12	novel	4828	25	NA	NA	-1366	3616	intron_retention	FALSE	canonical	3	70	junction_2	15.5177317930167	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	21040008	21031138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21031714_21031798_21033055_21035272_21035855_21036159_21036278_21038419_21038640_21039855
ES.34528.44	chr9	-	1650	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	13	-1	2	1	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCCTTACTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	21042526	21034753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.45	chr9	-	1667	5	NNC	ENSMUSG00000032175.12	novel	1662	5	NA	NA	16	-1	intron_retention	FALSE	canonical	2	4	junction_4	44.6731183151568	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGGCCTTACTCTGT	NA	False	NA	NA	False	NA	NA	NA	21042460	21034755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042382
ES.34528.6	chr9	-	6619	22	NIC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_21	14.2448622237368	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042539	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.7	chr9	-	4533	18	NIC	ENSMUSG00000032175.12	novel	4619	23	NA	NA	5689	0	intron_retention	FALSE	canonical	3	73	junction_17	10.4401407937052	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	4832	False	NA	-2	True	NA	NA	NA	21032953	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687
ES.34528.8	chr9	-	4992	24	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_4	22.8157740678198	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042493	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21019334_21020069_21020189_21020528_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34528.9	chr9	-	5614	24	NNC	ENSMUSG00000032175.12	novel	4770	25	NA	NA	20	0	intron_retention	FALSE	canonical	2	3	junction_10	22.4508705377253	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTGCTTGCATTT	NA	False	NA	-2	True	NA	NA	NA	21042508	21015363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022862_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ES.34529.1	chr9	+	2824	2	Antisense	novelGene_ENSMUSG00000019471.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTGTTGTTGTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	21061041	21066451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21061443_21064028
ES.3453.1	chr10	+	3531	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	-19	119667	-19	-119667	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTTGGTGGCACATT	NA	False	NA	20	True	TTTAAA	-9	NA	83196065	83204702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ES.3453.2	chr10	+	1204	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	-1	121976	-1	-121976	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGCCTCCAGTTCTAG	NA	False	NA	4	True	NA	NA	NA	83196083	83202393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ES.3453.3	chr10	+	884	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	3	122292	3	-122292	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGGGTTTTGGTATGT	NA	False	NA	NA	False	NA	NA	NA	83196087	83202077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ES.3453.4	chr10	+	1374	5	NNC	ENSMUSG00000020255.9	novel	123179	4	NA	NA	44	-36537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.8925085963467	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATAAGGTCTAATCCAA	NA	False	NA	NA	False	NA	NA	NA	83196128	83287832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567_83201737_83286960
ES.3453.5	chr10	+	4443	1	ISM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	21745	102097	21745	-102097	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	83217829	83222272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83217800_83222300
ES.3453.6	chr10	+	3269	4	NNC	ENSMUSG00000020255.9	novel	123179	4	NA	NA	45336	-51322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTCTTTGCTGTCA	NA	False	NA	NA	False	AATGAA	-5	NA	83241420	83273047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83243859_83245100_83245299_83270366_83270499_83272546
ES.3453.7	chr10	+	6740	1	ISM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	84996	36549	84996	-36549	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAGCAATTCTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	83281080	83287820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83281100_83287800
ES.34530.1	chr9	-	3128	2	NNC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	3989	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	21050501	21044519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21045770_21048623
ES.34530.10	chr9	-	1540	9	NNC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	21	1523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	569.715375757931	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGGTTCAGTGCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	21061217	21050725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21051260_21052053_21052126_21052248_21052306_21052347_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.11	chr9	-	1679	7	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	1	1521	intron_retention	FALSE	canonical	3	1564	junction_5	95.0648901189779	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGCTGGTTCAGTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	21061237	21050727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.15	chr9	-	1629	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	8	6214	8	1517	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGCCGCTGGTTCAGT	NA	False	NA	-13	True	AATAAA	-13	NA	21061270	21050731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.18	chr9	-	430	2	ISM	ENSMUSG00000019471.11	ENSMUST00000215296.2	1144	6	-24	2054	16	-1192	5prime_fragment	FALSE	canonical	3	1791	junction_1	0	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAGAAGAACATGCC	NA	False	NA	NA	False	NA	NA	NA	21061262	21054302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21054522_21061051
ES.34530.2	chr9	-	7763	9	NNC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	1	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	569.715375757931	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	21061237	21044521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21048549_21048591_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.3	chr9	-	176	1	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	15893	692	9105	-692	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21045385	21045209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21045200_21045400
ES.34530.4	chr9	-	2514	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	22	5315	-18	2416	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCCTAGCATTCAGGA	NA	False	NA	-12	True	ATTAAA	-18	NA	21061256	21049832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.5	chr9	-	2654	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	-17	2410	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGTTTGCCTAGCAT	NA	False	NA	-18	True	ATTAAA	-12	NA	21061255	21049838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
ES.34530.6	chr9	-	2114	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	5	5732	5	1999	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATGTGTATGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	21061273	21050249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.7	chr9	-	1747	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	-9	6113	-9	1618	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAAGTCCTAGGCCTTC	NA	False	NA	88	True	NA	NA	NA	21061287	21050630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ES.34530.8	chr9	-	1789	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	3	1525	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTTCAGTGCTGTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	21061275	21050723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
ES.34531.1	chr9	-	172	1	Intergenic	novelGene_28085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACCTGTACTAA	9504	False	NA	NA	False	NA	NA	NA	21067683	21067511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21067500_21067700
ES.34532.1	chr9	+	174	1	Intergenic	novelGene_28086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGTGCACC	NA	False	NA	14	True	NA	NA	NA	21071064	21071238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21071100_21071200
ES.34533.1	chr9	+	4626	15	FSM	ENSMUSG00000032177.18	ENSMUST00000039413.15	4653	15	24	3	24	-3	multi-exon	FALSE	canonical	0	0	junction_1	7.67848837164382	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCATTTGTTTCCTGGG	NA	False	NA	3	True	ATTAAA	-44	NA	21077033	21124541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21077529_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.10	chr9	+	2401	2	ISM	ENSMUSG00000032177.18	ENSMUST00000131769.8	3594	14	0	18105	0	24	intron_retention	FALSE	canonical	3	26	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGAGGCTTGAGGGAT	1164	False	NA	NA	False	NA	NA	NA	21092911	21104818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21093117_21102622
ES.34533.11	chr9	+	2315	10	NNC	ENSMUSG00000032177.18	novel	4653	15	NA	NA	-959	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.8229294772319	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAACAAAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-40	NA	21107041	21122897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21107194_21109888_21109983_21112377_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.12	chr9	+	3391	10	NNC	ENSMUSG00000032177.18	novel	4653	15	NA	NA	-948	-421	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.05265802314164	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACAGTGAACTTGTTTT	NA	False	NA	10	True	TATAAA	-20	NA	21107052	21124123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21107194_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.13	chr9	+	3418	9	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	30	3442	30	-3442	5prime_fragment	FALSE	canonical	0	0	junction_1	9.60387291669356	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGGAACTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	21108030	21119481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21108475_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440
ES.34533.14	chr9	+	4095	10	FSM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	49	-1620	49	-1	multi-exon	FALSE	canonical	0	0	junction_1	9.29090887127416	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTTTCCTGGGAT	NA	False	NA	5	True	NA	NA	NA	21108049	21124543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21108475_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.15	chr9	+	1608	4	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8054	-2	8054	2	3prime_fragment	FALSE	canonical	3	21	junction_2	2.62466929133727	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAACACATCAGCTGT	NA	False	NA	NA	False	NA	NA	NA	21116054	21122925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.16	chr9	+	2477	4	NNC	ENSMUSG00000032177.18	novel	4653	15	NA	NA	8472	-425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.2644968324772	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGACAGTGAACTTG	NA	False	NA	6	True	TATAAA	-16	NA	21116472	21124119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21116514_21116586_21116710_21117440_21117624_21121989
ES.34533.2	chr9	+	3952	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-34	-421	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACAGTGAACTTGTTTT	1130	False	NA	10	True	TATAAA	-20	NA	21092877	21124123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.3	chr9	+	4033	15	NNC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-29	-421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.82362982722658	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACAGTGAACTTGTTTT	1135	False	NA	10	True	TATAAA	-20	NA	21092882	21124123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103973_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.4	chr9	+	4628	16	NNC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.91590339412296	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTTTCCTGGGAT	1152	False	NA	5	True	NA	NA	NA	21092899	21124543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112148_21112427_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.5	chr9	+	2729	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAACACATCAGCTGT	1155	False	NA	NA	False	NA	NA	NA	21092902	21122925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.6	chr9	+	4344	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGTTTCCTGGGATT	1159	False	NA	6	True	NA	NA	NA	21092906	21124544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.7	chr9	+	4082	14	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	-4	-427	intron_retention	FALSE	canonical	3	11	junction_11	5.60008453021578	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGAGACAGTGAACT	1160	False	NA	4	True	TATAAA	-14	NA	21092907	21124117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116710_21117440_21117624_21121989
ES.34533.8	chr9	+	2523	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	0	-195	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAACAGAAAAGT	1164	False	NA	NA	False	NA	NA	NA	21092911	21122728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34533.9	chr9	+	4383	16	NNC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.9228132211698	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCATTTGTTTCCTGGG	1164	False	NA	3	True	ATTAAA	-44	NA	21092911	21124541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106043_21106155_21109888_21109983_21112377_21112427_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ES.34534.1	chr9	-	3411	16	Antisense	novelGene_ENSMUSG00000032177.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGACGTCAGCAAACAGC	7663	False	NA	NA	False	NA	NA	NA	21123606	21072942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21073070_21073919_21074004_21102618_21102815_21103690_21103723_21103810_21103887_21105870_21105917_21106037_21106153_21109886_21109981_21112514_21112714_21114493_21114589_21114679_21114849_21115619_21115720_21116265_21116420_21116585_21116707_21117437_21117622_21121987
ES.34534.2	chr9	-	574	1	Intergenic	novelGene_28087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	4869	False	NA	NA	False	AAAACA	-24	NA	21074934	21074360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21074400_21074900
ES.34534.3	chr9	-	157	1	Intergenic	novelGene_28088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAATAAATAAATAAATC	4870	False	NA	NA	False	NA	NA	NA	21074933	21074776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21074800_21074900
ES.34534.4	chr9	-	175	1	Intergenic	novelGene_28089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTAATGAATCTTTAAA	2774	False	NA	NA	False	NA	NA	NA	21089216	21089041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21089000_21089200
ES.34534.5	chr9	-	2990	1	Antisense	novelGene_ENSMUSG00000032177.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTTAAAAATCAACTGAG	NA	False	NA	NA	False	NA	NA	NA	21104604	21101614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21101600_21104600
ES.34534.6	chr9	-	3880	8	Antisense	novelGene_ENSMUSG00000032177.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7663	False	NA	NA	False	NA	NA	NA	21123606	21105866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21105917_21106037_21106153_21109886_21109981_21112514_21112713_21114500_21114849_21115619_21115720_21116265_21117622_21121987
ES.34534.7	chr9	-	3454	1	Antisense	novelGene_ENSMUSG00000032177.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACGTGGGAAAGG	7662	False	NA	NA	False	NA	NA	NA	21123607	21120153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21120200_21123600
ES.34535.1	chr9	-	561	1	Intergenic	novelGene_28090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGCTAAAAAAAAAAAAAC	8166	False	NA	NA	False	NA	NA	NA	21134917	21134356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21134400_21134900
ES.34535.2	chr9	-	383	1	Intergenic	novelGene_28091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTTATATATG	8164	False	NA	NA	False	NA	NA	NA	21134919	21134536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21134500_21134900
ES.34535.3	chr9	-	177	1	Intergenic	novelGene_28092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	8165	False	NA	NA	False	NA	NA	NA	21134918	21134741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21134700_21134900
ES.34536.1	chr9	+	4628	1	Genic_Genomic	ENSMUSG00000097439.7	novel	NA	NA	NA	NA	3090	74	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGATACCAGAGC	3029	False	NA	NA	False	NA	NA	NA	21139788	21144416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_21139800_21144400
ES.34537.1	chr9	-	3054	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	128	-10	128	9	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTAACCTGACATGTAT	NA	False	NA	10	True	AATAAA	-27	NA	21150239	21141016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.10	chr9	-	3265	6	NNC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.7192964779707	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTGGCTCTGAATTA	NA	False	NA	-3	True	AATAAA	-14	NA	21150365	21141029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145468_21148366_21149053_21150088
ES.34537.11	chr9	-	3303	5	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	60	junction_4	32.3602765748379	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTGTGGCTCTGAATT	NA	False	NA	-4	True	AATAAA	-13	NA	21150121	21141030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.12	chr9	-	3266	4	NIC	ENSMUSG00000003308.16	novel	3614	5	NA	NA	-6	-4	intron_retention	FALSE	canonical	1	3	junction_3	66.001683480213	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGTGTGGCTCTGAATT	NA	False	NA	-4	True	AATAAA	-13	NA	21150115	21141030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21148366
ES.34537.13	chr9	-	3887	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-270	-3	-4	3	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCTATTGTCTCTGCTT	NA	False	NA	-6	True	AATACA	-31	NA	21150379	21141359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
ES.34537.14	chr9	-	2966	5	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-4	3	intron_retention	FALSE	canonical	3	60	junction_4	32.3602765748379	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCTATTGTCTCTGCTT	NA	False	NA	-6	True	AATACA	-31	NA	21150113	21141359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.15	chr9	-	4529	4	NIC	ENSMUSG00000003308.16	novel	3151	6	NA	NA	43	3	intron_retention	FALSE	canonical	3	33	junction_3	49.1957541076689	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCTATTGTCTCTGCTT	NA	False	NA	-6	True	AATACA	-31	NA	21150585	21141359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21145370_21148366_21149053_21150371
ES.34537.16	chr9	-	2801	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	16	334	16	3	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCTATTGTCTCTGCTT	NA	False	NA	-6	True	AATACA	-31	NA	21150612	21141359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ES.34537.17	chr9	-	2733	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	-4	-566	-4	0	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGTCTATTGTCTCTG	NA	False	NA	-9	True	AATACA	-28	NA	21150379	21141362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
ES.34537.18	chr9	-	2843	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	-7	336	1	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGTCTATTGTCTCTG	NA	False	NA	-9	True	AATACA	-28	NA	21150374	21141362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.19	chr9	-	1461	4	NIC	ENSMUSG00000003308.16	novel	3614	5	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	65.5303152916436	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGTCTATTGTCTCTG	NA	False	NA	-9	True	AATACA	-28	NA	21150364	21141362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21150088
ES.34537.2	chr9	-	3315	2	ISM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	5645	0	3767	0	intron_retention	FALSE	canonical	3	142	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	5214	False	NA	0	True	AATAAA	-17	NA	21144722	21141026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21142165_21142545
ES.34537.20	chr9	-	1897	5	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	59.2847999068901	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCCGTCTATTGTCTC	NA	False	NA	-11	True	AATACA	-26	NA	21150116	21141364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21148366_21149053_21150088
ES.34537.21	chr9	-	3194	4	NIC	ENSMUSG00000003308.16	novel	3614	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	3	junction_3	66.001683480213	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCCGTCTATTGTCTC	NA	False	NA	-11	True	AATACA	-26	NA	21150377	21141364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21148366
ES.34537.22	chr9	-	2530	6	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-54	-90	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	55.7192964779707	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGTCTTCAGAGGGCG	NA	False	NA	-99	True	AATAAA	-14	NA	21150163	21141452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145358_21148366_21149053_21150088
ES.34537.23	chr9	-	5684	5	NIC	ENSMUSG00000003308.16	novel	3151	6	NA	NA	37	-90	intron_retention	FALSE	canonical	3	33	junction_4	45.3596737201669	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGTCTTCAGAGGGCG	NA	False	NA	-99	True	AATAAA	-14	NA	21150591	21141452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21149053_21150371
ES.34537.24	chr9	-	2277	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	256	639	-2	30	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGTTTTTTTCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	21150111	21141665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.25	chr9	-	2663	2	ISM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	260	2527	-6	-2527	internal_fragment	FALSE	canonical	3	132	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAGTTCAGTGGTAGTG	NA	False	NA	NA	False	TTTAAA	-19	NA	21150115	21144455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21145370_21148366
ES.34537.26	chr9	-	1169	3	NIC	ENSMUSG00000003308.16	novel	317	2	NA	NA	3	13	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	25	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTAT	NA	False	NA	NA	False	NA	NA	NA	21150364	21147405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21147613_21148366_21149053_21150088
ES.34537.3	chr9	-	3956	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	-6	-336	-6	0	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150115	21141026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
ES.34537.4	chr9	-	3134	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	16	1	16	0	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150612	21141026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ES.34537.5	chr9	-	3069	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	-4	-902	-4	0	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150379	21141026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
ES.34537.6	chr9	-	2659	3	ISM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	6030	1	4152	-1	3prime_fragment	FALSE	canonical	3	142	junction_1	1	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCTCTGAATTAAC	5599	False	NA	-1	True	AATAAA	-16	NA	21144337	21141027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21142165_21142545_21142723_21142992
ES.34537.7	chr9	-	2446	5	NIC	ENSMUSG00000003308.16	novel	3151	6	NA	NA	16	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	63.3975551579081	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGGCTCTGAATTAA	NA	False	NA	-2	True	AATAAA	-15	NA	21150612	21141028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21142723_21142992_21143199_21148366_21149053_21150371
ES.34537.8	chr9	-	3211	5	NIC	ENSMUSG00000003308.16	novel	3172	6	NA	NA	-29	-2	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	31.9090504402748	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGGCTCTGAATTAA	NA	False	NA	-2	True	AATAAA	-15	NA	21150138	21141028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21142165_21142545_21143199_21144683_21145370_21148366_21149053_21150088
ES.34537.9	chr9	-	5309	6	NNC	ENSMUSG00000003308.16	novel	2498	6	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	66.9495332321294	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGGCTCTGAATTAA	NA	False	NA	-2	True	AATAAA	-15	NA	21150107	21141028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145636_21145702_21146800_21148366
ES.34538.1	chr9	+	3577	1	Antisense	novelGene_ENSMUSG00000045087.9_AS_novelGene_ENSMUSG00000003308.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATTTATTTAGCTTG	NA	False	NA	NA	False	NA	NA	NA	21150642	21154219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21150600_21154200
ES.34539.1	chr9	+	1978	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	-13	3986	-13	41	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAGTGCTCTGGTAGCC	8621	False	NA	62	True	NA	NA	NA	21176575	21185082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.10	chr9	+	1857	10	NNC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	161.165278250559	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8645	False	NA	21	True	GATAAA	-13	NA	21176599	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179707_21179839_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.11	chr9	+	1987	9	NIC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	441	junction_7	37.8068694154911	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACATGCCTGGCGTTGT	8645	False	NA	18	True	GATAAA	-10	NA	21176599	21185038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.12	chr9	+	1647	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	12	4292	-1	-265	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCATGTCAGGTATGGG	8646	False	NA	NA	False	NA	NA	NA	21176600	21184776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.13	chr9	+	2340	8	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	12	4020	-1	7	intron_retention	FALSE	canonical	3	466	junction_7	31.0273085773004	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8646	False	NA	28	True	GATAAA	-20	NA	21176600	21185048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931
ES.34539.14	chr9	+	1931	9	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	220.830110039369	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8649	False	NA	21	True	GATAAA	-13	NA	21176603	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21177892_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184549
ES.34539.15	chr9	+	1173	6	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	2538	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	199.915382099527	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTGCTTTCTTCCAGC	8649	False	NA	NA	False	AATAAA	-31	NA	21176603	21180761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21180598
ES.34539.16	chr9	+	1884	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	152.03800694417	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGGCGTTGTTGACA	8649	False	NA	23	True	GATAAA	-15	NA	21176603	21185043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
ES.34539.17	chr9	+	2935	9	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	5	intron_retention	FALSE	canonical	3	441	junction_7	37.1811444148778	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCGTTGTTGACATTT	8649	False	NA	26	True	GATAAA	-18	NA	21176603	21185046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.19	chr9	+	2103	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	210.525503572182	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8649	False	NA	21	True	GATAAA	-13	NA	21176603	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179791_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184322
ES.34539.2	chr9	+	1900	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	158.714356356255	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8625	False	NA	21	True	GATAAA	-13	NA	21176579	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179791_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.21	chr9	+	2090	5	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	15	8023	2	-2769	5prime_fragment	FALSE	canonical	3	483	junction_4	16.0390149323454	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTATTATCTTGAACTT	8649	False	NA	NA	False	NA	NA	NA	21176603	21181045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900
ES.34539.22	chr9	+	3869	8	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	441	junction_7	36.9588850437005	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8649	False	NA	21	True	GATAAA	-13	NA	21176603	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21183843_21183931_21184009_21184086
ES.34539.24	chr9	+	2996	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	16	2939	3	1088	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACGCTGAACAGAATCT	8650	False	NA	NA	False	GATAAA	-13	NA	21176604	21186129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.25	chr9	+	2046	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	159.234278833282	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAACATGCCTGGCGTTG	8650	False	NA	17	True	GATAAA	-9	NA	21176604	21185037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21177892_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.26	chr9	+	2482	8	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	7	intron_retention	FALSE	canonical	2	2	junction_1	179.75334574389	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCGTTGTTGACATTTCA	8650	False	NA	28	True	GATAAA	-20	NA	21176604	21185048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21177888_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931
ES.34539.27	chr9	+	1898	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	159.460974752871	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8650	False	NA	22	True	GATAAA	-14	NA	21176604	21185042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178213_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.28	chr9	+	2097	9	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	170.540272003419	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGGCGTTGTTGAC	8650	False	NA	22	True	GATAAA	-14	NA	21176604	21185042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184241
ES.34539.29	chr9	+	2972	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	1097	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	158.714356356255	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGAATCTCACTAGGTG	8650	False	NA	NA	False	GATAAA	-22	NA	21176604	21186138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179791_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.3	chr9	+	2047	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	204.474635451955	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCGTTGTTGACATTT	8635	False	NA	26	True	GATAAA	-18	NA	21176589	21185046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21177888_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
ES.34539.30	chr9	+	3141	10	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	1087	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	158.927734179274	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCACGCTGAACAGAATC	8650	False	NA	NA	False	GATAAA	-12	NA	21176604	21186128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21177888_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.32	chr9	+	2971	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	5	1092	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	152.03800694417	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCTGAACAGAATCTCACT	8652	False	NA	NA	False	GATAAA	-17	NA	21176606	21186133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
ES.34539.33	chr9	+	1898	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	158.665266100261	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8652	False	NA	21	True	GATAAA	-13	NA	21176606	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182139_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.35	chr9	+	2398	9	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	10	8	intron_retention	FALSE	canonical	2	2	junction_1	168.152460582651	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTGTTGACATTTCAG	8657	False	NA	29	True	GATAAA	-21	NA	21176611	21185049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21177014_21177888_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
ES.34539.36	chr9	+	1105	6	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	387	0	intron_retention	FALSE	canonical	3	466	junction_4	38.5071421946631	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	NA	False	NA	21	True	GATAAA	-13	NA	21179760	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184207_21184549
ES.34539.4	chr9	+	2546	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	1	3404	1	623	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGACCTGTAACTATTT	8635	False	NA	NA	False	NA	NA	NA	21176589	21185664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.5	chr9	+	2267	9	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	169.390820294371	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8636	False	NA	21	True	GATAAA	-13	NA	21176590	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179544_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086
ES.34539.6	chr9	+	3366	7	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	3	6	intron_retention	FALSE	canonical	3	466	junction_6	33.1029538796095	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTTGTTGACATTTC	8640	False	NA	27	True	GATAAA	-19	NA	21176594	21185047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931
ES.34539.7	chr9	+	3280	2	NIC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	4	-2769	intron_retention	FALSE	canonical	3	512	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTATTATCTTGAACTT	8641	False	NA	NA	False	NA	NA	NA	21176595	21181045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21178377_21179546
ES.34539.8	chr9	+	2135	9	NNC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	1	junction_1	168.133875230425	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8642	False	NA	21	True	GATAAA	-13	NA	21176596	21185041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21177014_21177892_21178119_21178202_21178377_21179546_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ES.34539.9	chr9	+	2171	4	ISM	ENSMUSG00000002820.7	ENSMUST00000216826.2	2123	10	7	3997	-3	-2770	intron_retention	FALSE	canonical	3	489	junction_2	13.8162545173751	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGTATTATCTTGAACT	8644	False	NA	NA	False	NA	NA	NA	21176598	21181044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546
ES.3454.1	chr10	+	6098	3	NNC	ENSMUSG00000020255.9	novel	123179	4	NA	NA	120364	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGTGTCAGTAAAGTT	NA	False	NA	4	True	AATAAA	-13	NA	83316448	83324368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83317070_83318815_83322270_83322345
ES.3454.2	chr10	+	5917	1	Genic_Genomic	ENSMUSG00000020255.9	novel	NA	NA	NA	NA	122369	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTCAGTAAAGTTCT	NA	False	NA	6	True	AATAAA	-15	NA	83318453	83324370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_83318500_83324400
ES.34540.1	chr9	-	3989	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-2	1299	intron_retention	TRUE	canonical	3	91	junction_9	26.9681344704562	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTATGTTTCTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	21199254	21183453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.10	chr9	-	2659	18	NNC	ENSMUSG00000035047.10	novel	2490	18	NA	NA	-6	-25	intron_retention	FALSE	canonical	0	0	junction_17	40.0261160418785	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199271	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21199001
ES.34540.11	chr9	-	2789	17	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-4	-25	intron_retention	FALSE	canonical	3	91	junction_10	27.6433055865249	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199269	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.12	chr9	-	2575	19	NNC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-14	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5887225257955	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199279	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192349_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.13	chr9	-	1227	6	NNC	ENSMUSG00000035047.10	novel	2490	18	NA	NA	-1037	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.1531556314587	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21187726	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21185537_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680
ES.34540.14	chr9	-	2888	7	NNC	ENSMUSG00000035047.10	novel	2490	18	NA	NA	-2784	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.7340063725852	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21189473	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187263_21187350_21187478_21187680_21187770_21187855
ES.34540.15	chr9	-	2661	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-13	-25	intron_retention	FALSE	canonical	3	91	junction_10	27.170613068771	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199278	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.17	chr9	-	2617	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	9	-25	intron_retention	FALSE	canonical	3	91	junction_9	23.9184022333835	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199240	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.18	chr9	-	2642	19	NNC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	21	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.0884167111902	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199228	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191353_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.19	chr9	-	2689	18	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	-13	-25	intron_retention	FALSE	canonical	3	91	junction_9	26.9681344704562	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21199278	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.2	chr9	-	3905	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-8	-1299	-8	1299	multi-exon	FALSE	canonical	3	91	junction_10	26.4070697604511	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTATGTTTCTGTGCGT	NA	False	NA	NA	False	NA	NA	NA	21199273	21183453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.20	chr9	-	1618	6	NIC	ENSMUSG00000035047.10	novel	2490	18	NA	NA	-1303	-25	intron_retention	FALSE	canonical	3	131	junction_5	21.753160689886	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATAAATAGTC	NA	False	NA	-34	True	NA	NA	NA	21187992	21184777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187770_21187855
ES.34540.21	chr9	-	1117	9	ISM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-6	7299	-6	279	5prime_fragment	FALSE	canonical	3	103	junction_7	9.65336728815391	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAGTTAC	NA	False	NA	NA	False	NA	NA	NA	21199271	21192051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.22	chr9	-	2417	5	NIC	ENSMUSG00000035047.10	novel	2490	18	NA	NA	-6	279	intron_retention	FALSE	canonical	3	107	junction_1	7.94905654779232	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATAGTTAC	NA	False	NA	NA	False	NA	NA	NA	21199258	21192051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874
ES.34540.23	chr9	-	1851	1	Genic_Genomic	ENSMUSG00000035047.10	novel	NA	NA	NA	NA	-8	1398	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTCGGCACACGCATC	NA	False	NA	NA	False	NA	NA	NA	21199273	21197422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_21197400_21199300
ES.34540.24	chr9	-	1710	2	FSM	ENSMUSG00000035047.10	ENSMUST00000183665.2	345	2	-2	-1363	-2	1363	multi-exon	FALSE	canonical	3	109	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21199254	21197457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21199069_21199155
ES.34540.3	chr9	-	3045	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-12	-435	-12	435	multi-exon	FALSE	canonical	3	91	junction_10	26.4070697604511	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGAGAGTGGTCTGTTAC	NA	False	NA	-1	True	NA	NA	NA	21199277	21184317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.5	chr9	-	2616	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	-13	-5	-13	5	multi-exon	FALSE	canonical	3	91	junction_10	26.4070697604511	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCCCTTCCCATTATA	NA	False	NA	-4	True	AATAAA	-24	NA	21199278	21184747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ES.34540.6	chr9	-	2827	12	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	2633	0	intron_retention	FALSE	canonical	3	91	junction_7	22.6285126947588	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCATCCCTTCCCA	NA	False	NA	-9	True	AATAAA	-19	NA	21196616	21184752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21185545_21186564_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193525_21196536
ES.34540.7	chr9	-	4100	7	ISM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	8613	0	-3963	0	3prime_fragment	FALSE	canonical	3	131	junction_6	20.3551795210294	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCATCCCTTCCCA	NA	False	NA	-9	True	AATAAA	-19	NA	21190652	21184752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855
ES.34541.1	chr9	-	1298	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	122	3	-33	-3	multi-exon	FALSE	canonical	3	236	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATGATGACTTCAGATTT	NA	False	NA	NA	False	ATTAAA	-9	NA	21202482	21199708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21200629_21202104
ES.34541.2	chr9	-	2554	1	NIC	ENSMUSG00000096472.3	novel	1423	2	NA	NA	141	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTGTGATTATTTT	NA	False	NA	NA	False	TATAAA	-25	NA	21202308	21199754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21199800_21202300
ES.34541.4	chr9	-	985	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	312	126	157	-70	multi-exon	FALSE	canonical	3	236	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTCTTGGAAGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	21202292	21199831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21200629_21202104
ES.34542.1	chr9	+	3479	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	-2	1	-2	0	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6578	False	NA	18	True	AATAAA	-18	NA	21231991	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.10	chr9	+	3531	23	NNC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	61.7028503031845	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6622	False	NA	18	True	AATAAA	-18	NA	21232035	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264393_21264977
ES.34542.11	chr9	+	3753	21	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	11	0	intron_retention	FALSE	canonical	3	79	junction_1	42.1545964279104	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6641	False	NA	18	True	AATAAA	-18	NA	21232054	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.12	chr9	+	4912	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	71	-1505	21	1505	multi-exon	FALSE	canonical	3	79	junction_1	41.7821257447013	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTAGGCCAGGT	6651	False	NA	NA	False	NA	NA	NA	21232064	21267829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.13	chr9	+	4363	19	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	22	0	intron_retention	FALSE	canonical	3	72	junction_18	50.260586379487	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6652	False	NA	18	True	AATAAA	-18	NA	21232065	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.14	chr9	+	3674	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	22	0	intron_retention	FALSE	canonical	3	36	junction_21	58.2356227330149	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6652	False	NA	18	True	AATAAA	-18	NA	21232065	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
ES.34542.15	chr9	+	6545	18	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	22	0	intron_retention	FALSE	canonical	3	79	junction_1	39.6959028853401	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6652	False	NA	18	True	AATAAA	-18	NA	21232065	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.16	chr9	+	3441	22	NNC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.0465053658417	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6652	False	NA	18	True	AATAAA	-18	NA	21232065	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21232148_21249736_21249786_21253038_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.17	chr9	+	3530	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	61.283381862965	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6655	False	NA	18	True	AATAAA	-18	NA	21232068	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
ES.34542.18	chr9	+	3584	20	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	26	0	intron_retention	FALSE	canonical	3	79	junction_1	43.7382671247997	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	6656	False	NA	16	True	AATAAA	-16	NA	21232069	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.2	chr9	+	4150	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	10	1	intron_retention	FALSE	canonical	3	72	junction_21	46.6520385236562	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTATGCTTAATAG	6590	False	NA	20	True	AATAAA	-20	NA	21232003	21266325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.20	chr9	+	5907	18	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	41	1	intron_retention	FALSE	canonical	3	79	junction_1	46.0228617779074	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCTGGTATGCTTAA	6671	False	NA	17	True	AATAAA	-17	NA	21232084	21266322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.21	chr9	+	176	1	Intergenic	novelGene_28095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGGATG	6932	False	NA	NA	False	NA	NA	NA	21242538	21242714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21242500_21242700
ES.34542.22	chr9	+	3689	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-133	0	intron_retention	FALSE	canonical	3	114	junction_20	32.821639203428	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5603	False	NA	19	True	AATAAA	-19	NA	21248990	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.23	chr9	+	4159	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-20	0	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5716	False	NA	18	True	AATAAA	-18	NA	21249103	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.24	chr9	+	3473	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	-13	-4	-13	1	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTATGCTTAATAG	5723	False	NA	20	True	AATAAA	-20	NA	21249110	21266325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.25	chr9	+	6468	19	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-13	1681	intron_retention	FALSE	canonical	3	169	junction_12	26.0253912103991	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCTGGATGTGATGGT	5723	False	NA	NA	False	NA	NA	NA	21249110	21268005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.26	chr9	+	3642	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	51.5317642553865	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5724	False	NA	18	True	AATAAA	-18	NA	21249111	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
ES.34542.27	chr9	+	5150	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	-10	-1684	-10	1681	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCTGGATGTGATGGT	5726	False	NA	NA	False	NA	NA	NA	21249113	21268005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.28	chr9	+	3573	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	56.4293605073877	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5747	False	NA	16	True	AATAAA	-16	NA	21249134	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
ES.34542.29	chr9	+	3622	20	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	-5	intron_retention	FALSE	canonical	3	114	junction_19	33.610527964132	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGACTGACCTGGTAT	5748	False	NA	11	True	AATAAA	-11	NA	21249135	21266316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.30	chr9	+	7963	19	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	169	junction_11	25.427760177694	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	19	True	AATAAA	-19	NA	21249135	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.31	chr9	+	3539	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	114	junction_20	33.1368375075233	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	19	True	AATAAA	-19	NA	21249135	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.32	chr9	+	6255	19	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	intron_retention	FALSE	canonical	3	169	junction_11	25.5348345946822	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5748	False	NA	16	True	AATAAA	-16	NA	21249135	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.33	chr9	+	3892	22	NNC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	51.3625237263261	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGACCTGGTATGCTT	5748	False	NA	15	True	AATAAA	-15	NA	21249135	21266320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21264297_21264977
ES.34542.34	chr9	+	3440	22	NNC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	54.3528824227786	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5748	False	NA	19	True	AATAAA	-19	NA	21249135	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254156_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.35	chr9	+	4030	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	13	1	intron_retention	FALSE	canonical	0	0	junction_15	58.6860290017991	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCTGGTATGCTTAA	5749	False	NA	17	True	AATAAA	-17	NA	21249136	21266322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.36	chr9	+	3437	20	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_15	56.3927167651562	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5750	False	NA	18	True	AATAAA	-18	NA	21249137	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21259178_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.37	chr9	+	3368	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	53.5672241207252	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5750	False	NA	16	True	AATAAA	-16	NA	21249137	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.38	chr9	+	3413	22	NNC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	50.9907732527768	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5752	False	NA	18	True	AATAAA	-18	NA	21249139	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263819_21264977
ES.34542.39	chr9	+	4219	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	0	intron_retention	FALSE	canonical	3	72	junction_20	39.4016497116555	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5753	False	NA	18	True	AATAAA	-18	NA	21249140	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.4	chr9	+	3358	21	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	60.3696115607844	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	6602	False	NA	16	True	AATAAA	-16	NA	21232015	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.40	chr9	+	4290	20	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	1	intron_retention	FALSE	canonical	3	114	junction_19	33.5516305320224	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACCTGGTATGCTTAA	5753	False	NA	17	True	AATAAA	-17	NA	21249140	21266322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.41	chr9	+	3708	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	0	intron_retention	FALSE	canonical	3	36	junction_21	52.681862958776	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5753	False	NA	16	True	AATAAA	-16	NA	21249140	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
ES.34542.42	chr9	+	5123	20	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	0	intron_retention	FALSE	canonical	3	114	junction_19	33.3369434794796	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5753	False	NA	19	True	AATAAA	-19	NA	21249140	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.43	chr9	+	5804	20	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	17	0	intron_retention	FALSE	canonical	3	72	junction_19	40.2001226552338	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5753	False	NA	19	True	AATAAA	-19	NA	21249140	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.44	chr9	+	3653	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	28	0	intron_retention	FALSE	canonical	2	3	junction_21	57.7140892657351	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5764	False	NA	16	True	AATAAA	-16	NA	21249151	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
ES.34542.45	chr9	+	5392	19	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	42	-2	intron_retention	FALSE	canonical	3	169	junction_12	25.9196884030958	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGACCTGGTATGCT	5778	False	NA	14	True	AATAAA	-14	NA	21249165	21266319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.46	chr9	+	3481	22	NNC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.3295979685061	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5783	False	NA	16	True	AATAAA	-16	NA	21249170	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21249331_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.47	chr9	+	4155	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	56	0	intron_retention	FALSE	canonical	3	114	junction_20	33.0788452035436	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	5792	False	NA	18	True	AATAAA	-18	NA	21249179	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.48	chr9	+	3920	19	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	61	-1	intron_retention	FALSE	canonical	3	114	junction_18	33.2491529642411	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGACCTGGTATGCTT	5797	False	NA	15	True	AATAAA	-15	NA	21249184	21266320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.49	chr9	+	3530	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_14	67.8995397627996	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5839	False	NA	19	True	AATAAA	-19	NA	21249226	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
ES.34542.5	chr9	+	4234	21	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-19	0	intron_retention	FALSE	canonical	3	72	junction_20	47.6858469569326	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6602	False	NA	19	True	AATAAA	-19	NA	21232015	21266324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.50	chr9	+	3953	20	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-3104	-1	intron_retention	FALSE	canonical	3	72	junction_19	39.2354212740029	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGACCTGGTATGCTT	9686	False	NA	15	True	AATAAA	-15	NA	21253073	21266320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
ES.34542.51	chr9	+	3037	17	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	4560	-2	-2494	0	3prime_fragment	FALSE	canonical	3	114	junction_16	29.716301818194	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	NA	False	NA	18	True	AATAAA	-18	NA	21253683	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.52	chr9	+	3780	14	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-2085	0	intron_retention	FALSE	canonical	2	3	junction_13	66.6210692191691	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	NA	False	NA	16	True	AATAAA	-16	NA	21254092	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
ES.34542.53	chr9	+	4034	11	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-1981	0	intron_retention	FALSE	canonical	3	72	junction_10	46.4310241110402	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	NA	False	NA	18	True	AATAAA	-18	NA	21254196	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21254344_21254430_21254544_21256127_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259445_21259623_21259923_21263762_21263848_21264296
ES.34542.54	chr9	+	3727	8	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	-71	0	intron_retention	FALSE	canonical	3	195	junction_3	15.9552946877025	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	NA	False	NA	16	True	AATAAA	-16	NA	21256817	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762
ES.34542.55	chr9	+	1462	2	NNC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	4305	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	NA	False	NA	16	True	AATAAA	-16	NA	21263963	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21264082_21264977
ES.34542.6	chr9	+	3620	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	56.9185477184737	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6609	False	NA	18	True	AATAAA	-18	NA	21232022	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
ES.34542.7	chr9	+	3543	21	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-10	0	intron_retention	FALSE	canonical	3	79	junction_1	42.6432878657357	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6611	False	NA	18	True	AATAAA	-18	NA	21232024	21266323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34542.8	chr9	+	3414	22	NNC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	57.0065437625018	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	6612	False	NA	16	True	AATAAA	-16	NA	21232025	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263819_21264977
ES.34542.9	chr9	+	3591	23	NNC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0803299124045	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	6621	False	NA	16	True	AATAAA	-16	NA	21232034	21266321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21232148_21247919_21248077_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ES.34543.1	chr9	+	3699	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-107	3	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTCAGGCCTGGGTG	NA	False	NA	119	True	AATAAA	-17	NA	21279059	21316660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.10	chr9	+	3509	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	533.927642569665	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279137	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.11	chr9	+	3403	19	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-29	2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	569.01630517548	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279137	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.12	chr9	+	3767	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-161	0	-29	0	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	False	NA	32	True	AATACA	-21	NA	21279137	21313099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.13	chr9	+	2679	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-110	1115	-26	28	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCCTTTGAGCTTGGT	NA	False	NA	NA	False	NA	NA	NA	21279140	21311975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.14	chr9	+	6578	18	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-24	-19	intron_retention	FALSE	canonical	3	90	junction_8	571.414810635102	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279142	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21314798_21315355_21315488_21315991
ES.34543.15	chr9	+	3455	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279150	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.16	chr9	+	3770	18	NIC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	-15	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	531.820461678758	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTCTTCATTCATG	NA	False	NA	34	True	AATACA	-23	NA	21279151	21313101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.17	chr9	+	6096	22	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	564.66564665916	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279151	21316656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314241_21314431_21314798_21315355_21315488_21315991
ES.34543.18	chr9	+	2672	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-146	1080	-14	72	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCTTTTCTCAGAGA	NA	False	NA	NA	False	NA	NA	NA	21279152	21312019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.2	chr9	+	3588	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-45	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	565.472048044033	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279121	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315479_21315991
ES.34543.21	chr9	+	3039	19	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-11	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	835.085108769692	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279155	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310408_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315479_21315991
ES.34543.22	chr9	+	3077	18	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-11	-19	combination_of_known_splicesites	FALSE	canonical	3	53	junction_16	677.940831950914	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279155	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315488_21315991
ES.34543.23	chr9	+	3290	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-1	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	533.927642569665	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCATCTGTTAATGCTTT	NA	False	NA	-73	True	TTTAAA	-17	NA	21279165	21316468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.24	chr9	+	3220	20	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_18	523.383044847986	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279168	21316656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315488_21315991
ES.34543.25	chr9	+	3573	17	NIC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	692.790451272966	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	False	NA	32	True	AATACA	-21	NA	21279168	21313099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.26	chr9	+	2806	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	-130	930	2	222	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTAATCTACCTTTGTC	NA	False	NA	NA	False	TTTAAA	-16	NA	21279168	21312169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.27	chr9	+	3273	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	2	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTTAATGAGCCTTC	NA	False	NA	-48	True	TTTAAA	-42	NA	21279168	21316493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.28	chr9	+	3781	19	NIC	ENSMUSG00000032178.15	novel	3684	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	547.57789907515	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCCGTACTTGAGT	NA	False	NA	23	True	AATACA	-12	NA	21279168	21313090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.29	chr9	+	3602	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	540.54855471086	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279170	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.3	chr9	+	3590	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	-38	-3	-38	2	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279128	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.30	chr9	+	3678	22	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	4	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	659.769763318666	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279170	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21279898_21280012_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.31	chr9	+	3342	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	12	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCATCTGTTAATGCTTT	NA	False	NA	-73	True	TTTAAA	-17	NA	21279178	21316468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315362_21315488_21315991
ES.34543.32	chr9	+	3376	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	15	-19	combination_of_known_splicesites	FALSE	canonical	3	31	junction_4	556.302628933613	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279181	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.34	chr9	+	2830	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-68	922	16	221	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTAATCTACCTTTGT	NA	False	NA	NA	False	TTTAAA	-15	NA	21279182	21312168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.35	chr9	+	5519	20	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	24	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	762.118602674765	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279190	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314241_21315355_21315488_21315991
ES.34543.37	chr9	+	3159	19	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_17	530.082118609123	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279190	21316656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315488_21315991
ES.34543.39	chr9	+	3576	18	NIC	ENSMUSG00000032178.15	novel	3684	19	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_13	579.748979208013	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCCGTACTTGAGT	NA	False	NA	23	True	AATACA	-12	NA	21279190	21313090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.40	chr9	+	3497	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	572.224090695506	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279191	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307604_21308772_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.41	chr9	+	3464	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_9	556.384116702265	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279193	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.42	chr9	+	3586	21	NNC	ENSMUSG00000032178.15	novel	3430	21	NA	NA	30	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	674.675290417546	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279196	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21284792_21284879_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.43	chr9	+	3537	20	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	30	2	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	529.673719668514	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279196	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.44	chr9	+	3422	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	642.785799849012	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279198	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.45	chr9	+	3616	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	32	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	547.194414719302	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279198	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299328_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.47	chr9	+	6194	19	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-31	2	intron_retention	FALSE	canonical	0	0	junction_17	579.269069018006	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279202	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314241_21315355_21315488_21315991
ES.34543.48	chr9	+	6126	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_19	554.662771420617	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279202	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314687_21315355_21315488_21315991
ES.34543.49	chr9	+	3284	21	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-31	2	combination_of_known_junctions	FALSE	canonical	3	965	junction_19	396.045376188133	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCGTTCCGGATCCCT	NA	False	NA	NA	False	NA	NA	NA	21279202	21316388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.5	chr9	+	3811	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-117	-10	-33	1	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGAGTCTTCATTCAT	NA	False	NA	33	True	AATACA	-22	NA	21279133	21313100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.50	chr9	+	6796	20	NIC	ENSMUSG00000032178.15	novel	3684	19	NA	NA	-30	2	intron_retention	FALSE	canonical	3	922	junction_18	387.425496367311	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279203	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21315488_21315991
ES.34543.52	chr9	+	3176	15	NIC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	-23	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	586.860463893789	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGCCCTCCGTACTTG	NA	False	NA	20	True	AATACA	-9	NA	21279210	21313087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.53	chr9	+	6068	19	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-19	-19	intron_retention	FALSE	canonical	3	90	junction_8	588.78080769177	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279214	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314798_21315355_21315488_21315991
ES.34543.54	chr9	+	7234	18	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-19	-19	intron_retention	FALSE	canonical	3	53	junction_16	544.965031734284	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279214	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315488_21315991
ES.34543.55	chr9	+	7140	18	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-19	2	intron_retention	FALSE	canonical	3	39	junction_3	668.478264651454	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279214	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21315488_21315991
ES.34543.56	chr9	+	3355	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-15	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	542.146109856128	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279218	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314675_21315355_21315488_21315991
ES.34543.58	chr9	+	3610	21	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	752.960762589924	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279232	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21293757_21293881_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305100_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.60	chr9	+	3376	18	NIC	ENSMUSG00000032178.15	novel	3684	19	NA	NA	2	-145	combination_of_known_splicesites	FALSE	canonical	3	27	junction_13	579.748979208013	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTATTTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	21279243	21312943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.61	chr9	+	3471	17	NIC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	585.162637648714	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCCCTCCGTACTTGA	NA	False	NA	21	True	AATACA	-10	NA	21279244	21313088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299819_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.63	chr9	+	5342	17	NIC	ENSMUSG00000032178.15	novel	3684	19	NA	NA	5	3	intron_retention	FALSE	canonical	3	922	junction_16	391.089803465905	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCCGTACTTGAGTCTT	NA	False	NA	26	True	AATACA	-15	NA	21279255	21313093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.64	chr9	+	6499	19	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	10	-19	intron_retention	FALSE	canonical	3	90	junction_9	559.719274875063	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279260	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21314798_21315355_21315488_21315991
ES.34543.66	chr9	+	3422	20	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	12	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	666.066416293546	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279262	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299280_21299447_21299819_21300050_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.67	chr9	+	3596	22	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	12	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	659.650525904839	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279262	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21293757_21293881_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.69	chr9	+	3236	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	12	-49	combination_of_known_splicesites	FALSE	canonical	3	27	junction_13	563.976949883592	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTTTTTTTTTTTGGG	NA	False	NA	27	True	TTTAAA	-4	NA	21279262	21316568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.7	chr9	+	3648	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	-113	149	-29	-147	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGATGTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	21279137	21312941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.71	chr9	+	3182	20	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	52	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	656.030090182132	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21279350	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.72	chr9	+	3594	21	NIC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	560.104365274901	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279663	21316656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279899_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.73	chr9	+	2694	1	Genic_Genomic	ENSMUSG00000032178.15	novel	NA	NA	NA	NA	-1753	-13617	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATAAAATGGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	21283015	21285709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_21283000_21285700
ES.34543.74	chr9	+	2125	1	Intergenic	novelGene_28096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGTAAACTTAGT	NA	False	NA	NA	False	NA	NA	NA	21285654	21287779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21285700_21287800
ES.34543.75	chr9	+	3314	19	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-833	16	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	542.145326970136	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGATAAATAAAAGAAAAACA	7241	False	NA	92	True	NA	NA	NA	21298993	21316633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.76	chr9	+	5927	19	NIC	ENSMUSG00000032178.15	novel	3430	21	NA	NA	-420	-19	intron_retention	FALSE	canonical	3	922	junction_16	417.947232182352	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	7654	False	NA	96	True	NA	NA	NA	21299406	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314798_21315355_21315488_21315991
ES.34543.77	chr9	+	5360	16	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	177	-56	intron_retention	FALSE	canonical	1	1	junction_2	734.233284151267	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAACAGTGGTTTTTTT	8272	False	NA	20	True	NA	NA	NA	21300024	21316561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21300050_21300601_21300780_21305006_21305099_21305490_21305587_21306126_21306239_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314798_21315355_21315488_21315991
ES.34543.78	chr9	+	3173	15	NNC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	753	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	595.541585963772	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTACTTGAGTCT	8848	False	NA	25	True	AATACA	-14	NA	21300600	21313092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310551_21310717_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.79	chr9	+	2971	17	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	753	-19	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	569.307899448971	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	8848	False	NA	96	True	NA	NA	NA	21300600	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310423_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.8	chr9	+	3608	21	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	664.938117421464	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21279137	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310423_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315479_21315991
ES.34543.82	chr9	+	2995	16	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	897	-19	intron_retention	FALSE	canonical	3	965	junction_14	371.165874868187	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	8992	False	NA	96	True	NA	NA	NA	21300744	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.83	chr9	+	3748	15	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	3969	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	572.379516775793	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	False	NA	118	True	AATAAA	-16	NA	21303816	21316659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.84	chr9	+	6119	10	NIC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-4253	-55	intron_retention	FALSE	canonical	3	965	junction_8	412.242856626414	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACAGTGGTTTTTTTT	NA	False	NA	21	True	NA	NA	NA	21304511	21316562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21307428_21307512_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.85	chr9	+	5287	14	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-3414	0	intron_retention	FALSE	canonical	0	0	junction_12	609.136230038538	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21305350	21316656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21314687_21315355_21315488_21315991
ES.34543.86	chr9	+	2747	14	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	-2617	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	746.564145715985	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21306147	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747_21312168_21314431_21314687_21315355_21315488_21315991
ES.34543.87	chr9	+	2308	13	NNC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-2607	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	755.748575732844	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21306157	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314687_21315355_21315479_21315991
ES.34543.88	chr9	+	2253	11	ISM	ENSMUSG00000032178.15	ENSMUST00000214758.2	3177	21	18892	-253	-1451	-17	3prime_fragment	FALSE	canonical	3	965	junction_9	396.381899183098	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAGAAAAACAAAAGAA	NA	False	NA	98	True	NA	NA	NA	21307313	21316639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ES.34543.89	chr9	+	5134	6	NIC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	599	-19	intron_retention	FALSE	canonical	3	922	junction_4	456.939120671452	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21309363	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21309433_21310420_21310889_21310980_21311138_21311255_21311310_21311747_21315488_21315991
ES.34543.9	chr9	+	7298	19	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1159	junction_3	326.173134363097	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279137	21316657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21315488_21315991
ES.34543.90	chr9	+	4665	6	NNC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	-23	-19	intron_retention	FALSE	canonical	0	0	junction_4	772.019533431635	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21310424	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21310547_21310711_21310889_21310980_21311138_21311255_21314687_21315355_21315488_21315991
ES.34543.91	chr9	+	1726	4	ISM	ENSMUSG00000032178.15	ENSMUST00000215169.2	2118	10	1945	3573	-221	-5	internal_fragment	FALSE	canonical	3	922	junction_3	508.94684289117	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAATGAGCCCTCCGTA	NA	False	NA	16	True	AATACA	-5	NA	21310709	21313083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21310889_21310980_21311138_21311255_21311310_21311747
ES.34543.92	chr9	+	1092	4	NNC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	320	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	612.510861581699	760	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21311250	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21311310_21314431_21314687_21315355_21315488_21315991
ES.34543.93	chr9	+	2647	2	FSM	ENSMUSG00000032178.15	ENSMUST00000214200.2	871	2	-1599	-177	-1599	94	multi-exon	FALSE	canonical	3	1346	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTTGTGAAGTGAG	NA	False	NA	-61	True	TTTAAA	-29	NA	21313329	21316480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21315488_21315991
ES.34543.94	chr9	+	909	3	NNC	ENSMUSG00000032178.15	novel	2118	10	NA	NA	-343	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	673	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAACAAAAG	NA	False	NA	96	True	NA	NA	NA	21314585	21316637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21314717_21315355_21315488_21315991
ES.34544.1	chr9	+	1354	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-35	-3	-35	3	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2334	False	NA	45	True	TATAAA	-31	NA	21323097	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.10	chr9	+	1387	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	37	junction_5	266.350773182658	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2370	False	NA	28	True	TATAAA	-14	NA	21323133	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21331009_21331331
ES.34544.11	chr9	+	1369	9	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	278.008964558699	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2370	False	NA	28	True	TATAAA	-14	NA	21323133	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323394_21323536_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331009_21331331
ES.34544.12	chr9	+	1419	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	3	intron_retention	FALSE	canonical	3	37	junction_4	266.426350048189	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2370	False	NA	45	True	TATAAA	-31	NA	21323133	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.13	chr9	+	945	1	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	2	342	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATAAAGAATAGGTCC	2371	False	NA	NA	False	NA	NA	NA	21323134	21324079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323100_21324100
ES.34544.14	chr9	+	1651	9	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	3	intron_retention	FALSE	non_canonical	0	0	junction_8	274.535972142086	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2372	False	NA	45	True	TATAAA	-31	NA	21323135	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331058_21331121
ES.34544.15	chr9	+	1649	7	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	3	intron_retention	FALSE	canonical	0	0	junction_6	379.357973716412	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2372	False	NA	45	True	TATAAA	-31	NA	21323135	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330734
ES.34544.18	chr9	+	1073	2	ISM	ENSMUSG00000002825.9	ENSMUST00000216277.2	500	6	-62	5115	3	758	intron_retention	FALSE	canonical	3	46	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGAAGCTGTTTTCAT	2372	False	NA	NA	False	NA	NA	NA	21323135	21324495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21323242_21323528
ES.34544.19	chr9	+	1369	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	687	junction_5	67.0921707429414	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTGTTTTCATTTAA	2373	False	NA	27	True	TATAAA	-13	NA	21323136	21331555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330845_21330920_21331009_21331331
ES.34544.2	chr9	+	1658	9	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	-34	15	-34	-1	intron_retention	FALSE	canonical	3	687	junction_5	67.9264307909668	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTGTTTTCATTTAA	2335	False	NA	27	True	TATAAA	-13	NA	21323098	21331555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920
ES.34544.20	chr9	+	1426	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	687	junction_4	63.6237720903123	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2373	False	NA	28	True	TATAAA	-14	NA	21323136	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.22	chr9	+	1395	9	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	3	intron_retention	FALSE	canonical	0	0	junction_7	277.699365321565	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2378	False	NA	45	True	TATAAA	-31	NA	21323141	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323394_21323528_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330926_21331009_21331331
ES.34544.23	chr9	+	1265	10	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	3	intron_retention	FALSE	canonical	1	3	junction_2	261.873214069163	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2378	False	NA	45	True	TATAAA	-31	NA	21323141	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323394_21323528_21323598_21323733_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.25	chr9	+	1154	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	249.047568464389	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGCTCTTGTGTCTGT	2378	False	NA	41	True	TATAAA	-27	NA	21323141	21331569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.27	chr9	+	1025	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	390.860509005451	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGCTCTTGTGTCTGT	2378	False	NA	41	True	TATAAA	-27	NA	21323141	21331569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323242_21323528_21323598_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.28	chr9	+	767	2	ISM	ENSMUSG00000002825.9	ENSMUST00000214128.2	619	4	-25	4538	1	306	5prime_fragment	FALSE	canonical	3	770	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2378	False	NA	NA	False	NA	NA	NA	21323141	21324043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21323394_21323528
ES.34544.30	chr9	+	1625	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	37	junction_5	263.65211453732	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2379	False	NA	28	True	TATAAA	-14	NA	21323142	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920
ES.34544.31	chr9	+	1148	10	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	384.164830878557	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCATTTAAGCTC	2380	False	NA	31	True	TATAAA	-17	NA	21323143	21331559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330924_21331009_21331331
ES.34544.32	chr9	+	1352	1	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	758	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGAAGCTGTTTTCAT	2380	False	NA	NA	False	NA	NA	NA	21323143	21324495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323100_21324500
ES.34544.33	chr9	+	1413	11	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	3	intron_retention	FALSE	canonical	0	0	junction_3	326.55488053312	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2380	False	NA	45	True	TATAAA	-31	NA	21323143	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21326210_21326316_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.34	chr9	+	674	3	ISM	ENSMUSG00000002825.9	ENSMUST00000217188.2	821	7	-18	6553	3	306	5prime_fragment	FALSE	canonical	3	770	junction_1	5.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2380	False	NA	NA	False	NA	NA	NA	21323143	21324043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21323394_21323528_21323598_21323688
ES.34544.35	chr9	+	1302	10	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	3	3	intron_retention	FALSE	non_canonical	0	0	junction_7	263.253058556793	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2380	False	NA	45	True	TATAAA	-31	NA	21323143	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330657_21330734_21330845_21330920_21331009_21331331
ES.34544.37	chr9	+	701	6	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-671	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	329.311038381649	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTGTTTTCATTTAA	7817	False	NA	27	True	TATAAA	-13	NA	21328580	21331555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21328684_21329579_21329719_21330586_21330663_21330773_21330845_21330920_21331009_21331331
ES.34544.38	chr9	+	1077	5	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-662	0	intron_retention	FALSE	non_canonical	0	0	junction_4	411.778156292924	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	7826	False	NA	28	True	TATAAA	-14	NA	21328589	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21328694_21329579_21329719_21330586_21330663_21330734_21331058_21331121
ES.34544.39	chr9	+	768	5	ISM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	6334	-3	215	3	3prime_fragment	FALSE	canonical	3	758	junction_2	59.2663479556485	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	8703	False	NA	45	True	TATAAA	-31	NA	21329466	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.4	chr9	+	1450	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-20	0	intron_retention	FALSE	canonical	2	4	junction_5	268.09720135615	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2349	False	NA	28	True	TATAAA	-14	NA	21323112	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330549_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.40	chr9	+	1083	1	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-25	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGCTCTTGTGTCTGT	125	False	NA	41	True	TATAAA	-27	NA	21330486	21331569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21330500_21331600
ES.34544.5	chr9	+	1023	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	343.4181125101	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2357	False	NA	28	True	TATAAA	-14	NA	21323120	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323242_21323528_21323598_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.6	chr9	+	1500	10	NNC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	373.46141982642	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTGTTTTCATTTAAG	2364	False	NA	28	True	TATAAA	-14	NA	21323127	21331556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329974_21330506_21330663_21330734_21330845_21330920_21331009_21331331
ES.34544.7	chr9	+	1400	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-5	3	intron_retention	FALSE	canonical	3	687	junction_5	69.0261499360931	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2364	False	NA	45	True	TATAAA	-31	NA	21323127	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331009_21331331
ES.34544.8	chr9	+	1331	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	-2	3	intron_retention	FALSE	canonical	3	37	junction_5	251.720205244623	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTGTGTCTGTCTTC	2367	False	NA	45	True	TATAAA	-31	NA	21323130	21331573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328694_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ES.34545.10	chr9	+	3541	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	2	224	junction_13	132.11218266634	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5830	False	NA	22	True	AATAAA	-32	NA	21336191	21418438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.100	chr9	+	3782	6	ISM	ENSMUSG00000033335.18	ENSMUST00000172763.8	1772	12	12804	629	-820	4	internal_fragment	FALSE	canonical	3	496	junction_3	81.3304371069036	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	NA	False	NA	10	True	AATAAA	-20	NA	21404418	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759
ES.34545.102	chr9	+	2756	8	NNC	ENSMUSG00000033335.18	novel	1255	5	NA	NA	-514	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.839849044134	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGCTACGTGTGTGG	NA	False	NA	11	True	AATAAA	-21	NA	21404724	21418427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21405699_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.103	chr9	+	2321	7	ISM	ENSMUSG00000033335.18	ENSMUST00000115404.11	3455	21	69001	-16	34	0	3prime_fragment	FALSE	canonical	3	327	junction_6	135.640968082	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	NA	False	NA	20	True	AATAAA	-30	NA	21405272	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.104	chr9	+	3471	4	ISM	ENSMUSG00000033335.18	ENSMUST00000173299.2	1255	5	4940	-2516	4940	0	3prime_fragment	FALSE	canonical	3	496	junction_2	102.24480426897	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	NA	False	NA	18	True	AATAAA	-28	NA	21410178	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21410664_21411553_21411666_21414837_21415003_21415725
ES.34545.105	chr9	+	1680	6	ISM	ENSMUSG00000033335.18	ENSMUST00000115404.11	3455	21	74280	-14	5313	0	3prime_fragment	FALSE	canonical	3	327	junction_5	148.349047856735	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	NA	False	NA	18	True	AATAAA	-28	NA	21410551	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.106	chr9	+	3482	4	ISM	ENSMUSG00000033335.18	ENSMUST00000172763.8	1772	12	20723	5	-4065	0	3prime_fragment	FALSE	canonical	3	156	junction_3	238.844905511692	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	499	False	NA	15	True	AATAAA	-16	NA	21412337	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.11	chr9	+	3075	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	186.246374223385	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGATGTGTCTCCTT	5830	False	NA	20	True	AATAAA	-21	NA	21336191	21419055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.12	chr9	+	3540	21	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.059575953005	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5830	False	NA	18	True	AATAAA	-28	NA	21336191	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336547_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.13	chr9	+	4149	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	-23	-616	1	0	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5843	False	NA	15	True	AATAAA	-16	NA	21336204	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.16	chr9	+	1877	12	NNC	ENSMUSG00000033335.18	novel	1591	15	NA	NA	4	-7958	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	197.424993603073	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTCTCATTACAGGTG	5846	False	NA	NA	False	NA	NA	NA	21336207	21394764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21394493
ES.34545.20	chr9	+	3307	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	9	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	197.566244719668	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGCTACGTGTGTGG	5851	False	NA	11	True	AATAAA	-21	NA	21336212	21418427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416958_21417012_21417631
ES.34545.22	chr9	+	3525	21	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	171.668423130173	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5862	False	NA	18	True	AATAAA	-28	NA	21336223	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405922_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.24	chr9	+	3426	19	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	202.934855447642	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACGTGTGTGGGCCTT	5862	False	NA	16	True	AATAAA	-26	NA	21336223	21418432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.28	chr9	+	3471	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	182.918748897047	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5863	False	NA	20	True	AATAAA	-30	NA	21336224	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401097_21405837_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.29	chr9	+	2953	19	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	205.95850145354	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5866	False	NA	15	True	AATAAA	-16	NA	21336227	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.3	chr9	+	3557	20	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-21	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	169.277493501334	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGGGCCTTTTGTGT	5821	False	NA	22	True	AATAAA	-32	NA	21336182	21418438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.31	chr9	+	3642	22	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	3	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	205.541770696698	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGCTACGTGTGTGG	5869	False	NA	11	True	AATAAA	-21	NA	21336230	21418427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.32	chr9	+	3637	21	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	263.079165841767	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5870	False	NA	20	True	AATAAA	-30	NA	21336231	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391829_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21406133_21406347_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.34	chr9	+	3478	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	230.787943342463	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTACTGGTGGCTACG	5873	False	NA	4	True	AATAAA	-14	NA	21336234	21418420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387911_21389582_21389646_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.35	chr9	+	5021	13	NNC	ENSMUSG00000033335.18	novel	1591	15	NA	NA	-6	-936	intron_retention	FALSE	canonical	0	0	junction_3	242.100013768415	817	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATTAATAGCATGTAA	5873	False	NA	NA	False	ATTAAA	-15	NA	21336234	21401786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21377848_21378414_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21391842_21392628_21392716_21396946_21397018_21401038
ES.34545.36	chr9	+	2500	18	ISM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	7	3147	-6	-631	5prime_fragment	FALSE	canonical	2	407	junction_14	100.631810307053	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAAGTTGGTTTGTTTA	5873	False	NA	NA	False	AAAAAG	-13	NA	21336234	21415287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837
ES.34545.38	chr9	+	4473	8	NIC	ENSMUSG00000033335.18	novel	1591	15	NA	NA	-5	-9883	intron_retention	FALSE	canonical	3	9	junction_1	239.045038878126	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATGTACTTAATCAAGC	5874	False	NA	NA	False	NA	NA	NA	21336235	21392839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576
ES.34545.39	chr9	+	5485	19	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	9	junction_1	190.608965628004	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	5874	False	NA	17	True	AATAAA	-27	NA	21336235	21418433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.40	chr9	+	3433	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	174.736636017634	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5874	False	NA	20	True	AATAAA	-30	NA	21336235	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.41	chr9	+	2905	21	NNC	ENSMUSG00000033335.18	novel	3063	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	185.765571352713	864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5875	False	NA	15	True	AATAAA	-16	NA	21336236	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416884_21417012_21418718
ES.34545.42	chr9	+	3211	19	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	204.286087523247	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	5875	False	NA	10	True	AATAAA	-20	NA	21336236	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336344_21376864_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.49	chr9	+	3485	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	218.783681221829	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5882	False	NA	18	True	AATAAA	-28	NA	21336243	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415960_21416759_21417004_21417621
ES.34545.5	chr9	+	3071	20	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	156	junction_19	153.943760641486	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGATGTGTCTCCTT	5827	False	NA	20	True	AATAAA	-21	NA	21336188	21419055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.50	chr9	+	3492	20	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	182.918748897047	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	5882	False	NA	10	True	AATAAA	-20	NA	21336243	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401109_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.51	chr9	+	6331	18	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	4	0	intron_retention	FALSE	canonical	3	224	junction_11	134.843674708889	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5883	False	NA	20	True	AATAAA	-30	NA	21336244	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.52	chr9	+	1318	7	ISM	ENSMUSG00000033335.18	ENSMUST00000169194.9	1591	15	-293	16572	5	7154	5prime_fragment	FALSE	canonical	3	562	junction_1	64.6984457996395	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTGTTTCAACAAGTT	5884	False	NA	NA	False	NA	NA	NA	21336245	21386150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827
ES.34545.55	chr9	+	5539	19	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	7	0	intron_retention	FALSE	canonical	3	224	junction_12	131.050233041559	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5886	False	NA	18	True	AATAAA	-28	NA	21336247	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.56	chr9	+	4088	19	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-8	-2	intron_retention	FALSE	canonical	2	224	junction_13	119.480730922306	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACGTGTGTGGGCCTT	5894	False	NA	16	True	AATAAA	-26	NA	21336255	21418432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759
ES.34545.57	chr9	+	3272	20	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	212.027071913887	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	5895	False	NA	10	True	AATAAA	-20	NA	21336256	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416958_21417012_21417628
ES.34545.61	chr9	+	3624	7	ISM	ENSMUSG00000033335.18	ENSMUST00000169194.9	1591	15	-279	14252	-4	9474	intron_retention	FALSE	canonical	3	562	junction_1	64.6984457996395	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACAATGCTAGGCTTAC	5898	False	NA	NA	False	NA	NA	NA	21336259	21388470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827
ES.34545.62	chr9	+	5425	17	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	192.000935870115	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5902	False	NA	15	True	AATAAA	-16	NA	21336263	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725
ES.34545.63	chr9	+	3469	21	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.8219645447	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGTGGGCCTTTTGTG	5902	False	NA	21	True	AATAAA	-31	NA	21336263	21418437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368809_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.65	chr9	+	3475	21	FSM	ENSMUSG00000033335.18	ENSMUST00000172482.8	2613	21	-127	-735	1	-1	multi-exon	FALSE	canonical	0	0	junction_9	207.867572026038	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	5903	False	NA	17	True	AATAAA	-27	NA	21336264	21418433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.66	chr9	+	3466	21	NNC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	183.284041858532	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5904	False	NA	18	True	AATAAA	-28	NA	21336265	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385833_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.67	chr9	+	3000	21	FSM	ENSMUSG00000033335.18	ENSMUST00000165766.9	3063	21	63	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	219.759049870534	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5905	False	NA	15	True	AATAAA	-16	NA	21336266	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.68	chr9	+	3474	20	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.393216433758	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5905	False	NA	18	True	AATAAA	-28	NA	21336266	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336549_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405783_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.69	chr9	+	4360	19	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_13	169.663765164741	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGGGCCTTTTG	5905	False	NA	19	True	AATAAA	-29	NA	21336266	21418435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.70	chr9	+	6943	16	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	2	4	intron_retention	FALSE	canonical	3	9	junction_1	192.024928937191	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	5907	False	NA	10	True	AATAAA	-20	NA	21336268	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21411666_21414837_21415003_21415725_21415959_21416759
ES.34545.71	chr9	+	3030	22	NNC	ENSMUSG00000033335.18	novel	3063	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	217.204888800462	864	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5908	False	NA	15	True	AATAAA	-16	NA	21336269	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21398498_21398532_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.76	chr9	+	6061	1	Intergenic	novelGene_28099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	715	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	21348293	21354354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21348300_21354400
ES.34545.77	chr9	+	3234	20	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	-15382	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.393216433758	862	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	1053	False	NA	18	True	AATAAA	-28	NA	21353020	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21353072_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.78	chr9	+	176	1	Intergenic	novelGene_28100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	721	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	21362433	21362609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21362400_21362600
ES.34545.79	chr9	+	182	1	Intergenic	novelGene_28101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	721	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	21364987	21365169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21365000_21365200
ES.34545.8	chr9	+	3629	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	-51	-76	-14	76	multi-exon	FALSE	canonical	2	327	junction_20	112.703715555433	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCGTGAGTCTTGTGTC	5828	False	NA	96	True	NA	NA	NA	21336189	21418512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.81	chr9	+	3837	20	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	-363	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	222.035434271249	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGGCTACGTGTGTG	19	False	NA	10	True	AATAAA	-20	NA	21368039	21418426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389646_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.83	chr9	+	3402	20	NIC	ENSMUSG00000033335.18	novel	3063	21	NA	NA	-292	0	intron_retention	FALSE	canonical	2	156	junction_19	140.048665858923	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	56	False	NA	15	True	AATAAA	-16	NA	21368110	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.84	chr9	+	3751	20	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	-261	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	210.569166691657	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	87	False	NA	20	True	AATAAA	-30	NA	21368141	21418436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.87	chr9	+	3179	20	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	-172	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	198.851801050841	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	176	False	NA	15	True	AATAAA	-16	NA	21368230	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.88	chr9	+	3238	21	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_1	182.697947443314	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACGTGTGTGGGCCTT	352	False	NA	16	True	AATAAA	-26	NA	21368406	21418432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21368462_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ES.34545.89	chr9	+	2733	20	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	200.5600745171	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	376	False	NA	15	True	AATAAA	-16	NA	21368430	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21368462_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.9	chr9	+	3080	21	NIC	ENSMUSG00000033335.18	novel	3510	21	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	156	junction_20	136.611712528612	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGATGTGTCTCCTT	5830	False	NA	20	True	AATAAA	-21	NA	21336191	21419055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.90	chr9	+	2739	20	NNC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	224.782344709443	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGCAGATGTGTCTC	379	False	NA	17	True	AATAAA	-18	NA	21368433	21419052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21368462_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401098_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.91	chr9	+	3450	21	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	42	-1	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	168.388271563075	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTACGTGTGTGGGCCTTT	390	False	NA	17	True	AATAAA	-27	NA	21368444	21418433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.92	chr9	+	2908	21	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	111	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	183.990998421118	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	-2	True	NA	15	True	AATAAA	-16	NA	21368513	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.93	chr9	+	3325	20	ISM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	32424	-1	262	1	3prime_fragment	FALSE	canonical	2	327	junction_19	115.380593864147	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGTGGGCCTTTTGTG	149	False	NA	21	True	AATAAA	-31	NA	21368664	21418437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.94	chr9	+	3222	19	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	348	-2	combination_of_known_junctions	FALSE	canonical	2	224	junction_12	135.525315388348	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACGTGTGTGGGCCTT	235	False	NA	16	True	AATAAA	-26	NA	21368750	21418432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.97	chr9	+	2207	12	NNC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	1785	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.829673794932	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTACGTGTGTGGGCCT	8963	False	NA	15	True	AATAAA	-25	NA	21389574	21418431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21389644_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34545.98	chr9	+	1742	11	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	184.635343312162	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	NA	False	NA	15	True	AATAAA	-16	NA	21391627	21419050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ES.34545.99	chr9	+	1929	10	ISM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	60704	2	5330	0	3prime_fragment	FALSE	canonical	3	327	junction_9	130.298801904614	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	NA	False	NA	18	True	AATAAA	-28	NA	21396944	21418434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ES.34546.1	chr9	-	176	2	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	21399982	21204000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21204073_21399878
ES.34546.10	chr9	-	161	1	Intergenic	novelGene_28094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAATAATAA	8404	False	NA	NA	False	NA	NA	NA	21240039	21239878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21239900_21240000
ES.34546.11	chr9	-	1818	5	NNC	ENSMUSG00000110915.2	novel	416	3	NA	NA	60	4783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAATGGCCTGGATT	7545	False	NA	NA	False	NA	NA	NA	21280420	21273908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21274565_21277784_21277899_21277999_21278868_21279886_21279996_21280349
ES.34546.12	chr9	-	3905	17	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	8577	False	NA	NA	False	NA	NA	NA	21313096	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299403_21299446_21299818_21300049_21303589_21303737_21305004_21305097_21305488_21305586_21306125_21306236_21306663_21306763_21307313_21307425_21307509_21307622_21308762_21308963_21309262_21309431_21310418_21310545_21310709_21310887_21310978_21311135_21311252
ES.34546.13	chr9	-	1829	13	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	9808	False	NA	NA	False	NA	NA	NA	21310813	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299403_21299446_21299818_21300049_21303589_21303737_21305004_21305097_21305488_21305586_21306125_21306236_21306663_21306763_21307313_21307425_21307509_21307622_21308762_21308963_21310418
ES.34546.14	chr9	-	2082	6	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	7313	False	NA	NA	False	NA	NA	NA	21305027	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299403_21299446_21299818_21300049_21300600_21300780_21303590
ES.34546.15	chr9	-	4083	18	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	8577	False	NA	NA	False	NA	NA	NA	21313096	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299403_21299446_21299818_21300049_21300600_21300780_21303590_21303737_21305004_21305097_21305488_21305586_21306125_21306236_21306663_21306763_21307313_21307425_21307509_21307622_21308762_21308963_21309262_21309431_21310418_21310545_21310709_21310887_21310978_21311135_21311252
ES.34546.16	chr9	-	6320	10	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	8577	False	NA	NA	False	NA	NA	NA	21313096	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299818_21300049_21300600_21300780_21303590_21303737_21305004_21307622_21308762_21308963_21309262_21309431_21310418_21310887_21310978
ES.34546.17	chr9	-	3626	6	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCGGTTTTCGCCGGG	7313	False	NA	NA	False	NA	NA	NA	21305027	21279298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299403_21299446_21299818_21300049_21300600_21303739_21305005
ES.34546.18	chr9	-	1984	15	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	9773	False	NA	NA	False	NA	NA	NA	21310848	21279314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299818_21300046_21300600_21300780_21303590_21303737_21305004_21305097_21305488_21305586_21306125_21306236_21306663_21306763_21307313_21307425_21307509_21307622_21308762_21308963_21309262_21309431_21310418_21310545_21310709
ES.34546.2	chr9	-	2648	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	-23	-919	3	71	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGCTGTCCTGGAAT	1322	False	NA	NA	False	NA	NA	NA	21223630	21205837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
ES.34546.20	chr9	-	922	7	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	7313	False	NA	NA	False	NA	NA	NA	21305027	21279314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21279394_21298993_21299093_21299279_21299446_21299818_21300049_21300600_21300780_21303590_21303737_21305004
ES.34546.22	chr9	-	3777	1	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAGTGACTTCAG	5102	False	NA	NA	False	NA	NA	NA	21286320	21282543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21282500_21286300
ES.34546.23	chr9	-	161	1	Intergenic	novelGene_28097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	3924	False	NA	NA	False	NA	NA	NA	21287498	21287337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21287300_21287500
ES.34546.24	chr9	-	179	2	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	21399984	21293336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21293458_21399926
ES.34546.25	chr9	-	177	2	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	21399983	21293336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21293434_21399903
ES.34546.26	chr9	-	211	1	Intergenic	novelGene_28098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATGGATGGAAATAAGG	NA	False	NA	NA	False	AATAAA	-6	NA	21325093	21324882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21324900_21325100
ES.34546.27	chr9	-	4506	1	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	21385687	21381181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21381200_21385700
ES.34546.28	chr9	-	3325	2	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	21385685	21381189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21382736_21383906
ES.34546.29	chr9	-	3992	5	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21391614	21381223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21382736_21383906_21384068_21385825_21385971_21387768_21387903_21389574
ES.34546.3	chr9	-	1725	11	FSM	ENSMUSG00000003309.15	ENSMUST00000115433.11	2586	11	11	850	-10	-2	multi-exon	FALSE	canonical	2	2	junction_6	7.33552997403732	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGAGTGTGCTTCT	1330	False	NA	-6	True	ATTAAA	-10	NA	21223622	21206758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214068_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
ES.34546.30	chr9	-	178	1	Intergenic	novelGene_28102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21399984	21399806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21399800_21400000
ES.34546.4	chr9	-	1597	11	NIC	ENSMUSG00000003309.15	novel	1706	11	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	7.91201617794099	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTGAGTGTGCTTC	1346	False	NA	-7	True	ATTAAA	-9	NA	21223606	21206759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21216963_21220662_21220731_21220931_21221089_21223502
ES.34546.5	chr9	-	1474	9	NNC	ENSMUSG00000003309.15	novel	1706	11	NA	NA	3103	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	7.72576857018122	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTGAGTGTGCTTC	4448	False	NA	-7	True	ATTAAA	-9	NA	21220504	21206759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220403
ES.34546.6	chr9	-	1705	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	-2	3	-2	-3	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTGAGTGTGCTTC	1343	False	NA	-7	True	ATTAAA	-9	NA	21223609	21206759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
ES.34546.7	chr9	-	4529	8	ISM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	3384	3	3384	-3	3prime_fragment	FALSE	canonical	3	12	junction_6	6.11121418177355	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTGAGTGTGCTTC	4729	False	NA	-7	True	ATTAAA	-9	NA	21220223	21206759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788
ES.34546.8	chr9	-	186	1	Intergenic	novelGene_28093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	21225329	21225143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21225100_21225300
ES.34546.9	chr9	-	178	2	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATTTAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	21399984	21225153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21225163_21399815
ES.34547.1	chr9	-	1361	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	22	-5	4	3	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGACTGGGCTTAGGG	NA	False	NA	0	True	AATAAA	-24	NA	21421526	21418845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ES.34547.3	chr9	-	1274	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	49	-310	2	0	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421481	21418852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
ES.34547.4	chr9	-	1463	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	-13	4	-13	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421496	21418852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21419688_21420226_21420648_21421289
ES.34547.5	chr9	-	1225	3	FSM	ENSMUSG00000032180.12	ENSMUST00000214285.2	1213	3	-12	0	-12	0	multi-exon	FALSE	canonical	2	30	junction_2	267.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421495	21418852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21419688_21420226_21420411_21421289
ES.34548.1	chr9	+	175	1	Intergenic	novelGene_28103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	21423065	21423240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21423100_21423200
ES.34549.1	chr9	-	173	1	Intergenic	novelGene_28104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAGTAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	21429031	21428858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21428900_21429000
ES.3455.1	chr10	-	6252	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	10	-235	10	235	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTCCTTCCTTGTT	NA	False	NA	NA	False	AATACA	-12	NA	83369994	83323078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.10	chr10	-	5674	23	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	19	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.4492638033699	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGATGCCCTTATGAT	NA	False	NA	NA	False	ATTAAA	-11	NA	83369985	83323649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343876_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.11	chr10	-	4243	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	27	1757	27	222	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTAGTGGTTAGAATG	NA	False	NA	NA	False	NA	NA	NA	83369977	83325070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.12	chr10	-	3721	23	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	-16	-286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.0985741760194	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTCAAGGAAGCTAACTG	NA	False	NA	NA	False	NA	NA	NA	83369961	83325578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329290_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.14	chr10	-	5825	22	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	2	-505	intron_retention	FALSE	canonical	1	1	junction_19	15.37335799539	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAGCTTACTGTGTGAG	NA	False	NA	NA	False	AGTAAA	-31	NA	83370002	83325797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356250_83358565_83358801_83363168_83363314_83369830
ES.3455.16	chr10	-	3379	24	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	11	-522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	15.1149345892416	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCGTGGTCATATTATA	NA	False	NA	NA	False	AGTAAA	-14	NA	83369934	83325814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358664_83358740_83358801_83363168_83363314_83369830
ES.3455.19	chr10	-	3185	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	-31	2873	-31	-894	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTATGCTCTTCTAGG	NA	False	NA	52	True	NA	NA	NA	83370035	83326186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.2	chr10	-	6025	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	4	-2	4	2	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCCTTTTTCTCCT	NA	False	NA	NA	False	AAAAAG	-2	NA	83370000	83323311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.21	chr10	-	5401	21	NIC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	57	-943	intron_retention	FALSE	canonical	3	48	junction_4	7.66093989011792	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGGTGCTGTATGTT	NA	False	NA	3	True	NA	NA	NA	83369888	83326235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83326499_83328338_83328539_83329292_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.22	chr10	-	2698	20	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	5	-963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	15.795963578521	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTAACCTCTTTTTAAC	NA	False	NA	-17	True	AAGAAA	-26	NA	83369940	83326255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83356129_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.24	chr10	-	2807	22	NIC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	-19	-966	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	15.6249988662131	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTAACCTCTTTTT	NA	False	NA	-20	True	AAGAAA	-23	NA	83369964	83326258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83363168_83363314_83369830
ES.3455.25	chr10	-	4882	22	NIC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	-19	-966	intron_retention	FALSE	canonical	3	47	junction_8	8.46628634852067	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTAACCTCTTTTT	NA	False	NA	-20	True	AAGAAA	-23	NA	83369964	83326258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.26	chr10	-	2733	21	ISM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	3	5885	3	2	5prime_fragment	FALSE	canonical	3	47	junction_7	8.19084855189009	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGCTCCACCCTAAG	NA	False	NA	NA	False	CATAAA	-17	NA	83370001	83329198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.4	chr10	-	8319	22	NIC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	-17	0	intron_retention	FALSE	canonical	3	47	junction_8	8.20734696584024	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83369962	83323313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83326499_83328338_83328539_83329292_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.6	chr10	-	6039	23	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.6044037049868	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83369989	83323313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329369_83331732_83331956_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ES.3455.7	chr10	-	5930	23	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.4826156880843	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83369987	83323313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329369_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356250_83358565_83358801_83363168_83363314_83369830
ES.3455.8	chr10	-	5973	24	NNC	ENSMUSG00000020256.15	novel	6027	23	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	22.4091528694224	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83369890	83323313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356250_83358565_83358801_83363168_83363314_83369195_83369306_83369830
ES.3455.9	chr10	-	5912	23	FSM	ENSMUSG00000020256.15	ENSMUST00000146640.8	3938	23	0	-1974	0	-5	multi-exon	FALSE	canonical	1	1	junction_22	15.2529634026304	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTCTTTTCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	83369259	83323318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369195
ES.34550.1	chr9	-	1185	2	Intergenic	novelGene_28105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTAGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	21431716	21430445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21430547_21430632
ES.34551.1	chr9	-	164	1	Intergenic	novelGene_28106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCTTTTAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	21445907	21445743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21445700_21445900
ES.34552.1	chr9	+	174	1	Intergenic	novelGene_28107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGCCAACAAA	NA	False	NA	NA	False	NA	NA	NA	21452655	21452829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21452700_21452800
ES.34552.100	chr9	+	5354	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-67	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.55439731427	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCCCTGGACTCCTT	1170	False	NA	25	True	AATAAA	-22	NA	21527397	21614665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527466_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566919_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.102	chr9	+	5562	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	-48	862	-48	2	multi-exon	FALSE	non_canonical	0	0	junction_28	138.291543357457	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTCCCTGGACTCCT	1189	False	NA	24	True	AATAAA	-21	NA	21527416	21614664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.104	chr9	+	5346	32	NIC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-34	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	147.44659873903	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1203	False	NA	20	True	AATAAA	-17	NA	21527430	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.106	chr9	+	5261	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.038970775457	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	1205	False	NA	21	True	AATAAA	-18	NA	21527432	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527466_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590402_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.11	chr9	+	3286	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	290.969001785414	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458114	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499353
ES.34552.112	chr9	+	5463	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	30	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	176.446533678096	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAAGCCACCACTGGCT	1267	False	NA	12	True	AATAAA	-9	NA	21527494	21614652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612158_21612283_21612383_21612527_21614231
ES.34552.114	chr9	+	6065	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	46	265	46	-252	multi-exon	FALSE	non_canonical	0	0	junction_28	138.291543357457	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCCTGAATGTGT	1283	False	NA	NA	False	TTTAAA	-20	NA	21527510	21615261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.117	chr9	+	5198	33	NIC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	2	59	junction_1	136.781075079852	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1292	False	NA	22	True	AATAAA	-19	NA	21527519	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.120	chr9	+	5387	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-39	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	176.660346058772	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCACTGGCTCCCTGGA	1293	False	NA	19	True	AATAAA	-16	NA	21527520	21614659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548640_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.121	chr9	+	6313	34	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-39	-4	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_28	156.387829934745	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCTGTGCCTATAAGC	1293	False	NA	NA	False	AATAAA	-16	NA	21527520	21615522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.123	chr9	+	5346	33	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-38	-1802	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_13	130.361482850332	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGGGTTAATGGCACT	1294	False	NA	NA	False	AATAAA	-17	NA	21527521	21612860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566925_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383
ES.34552.126	chr9	+	5439	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	179.452386056415	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1295	False	NA	22	True	AATAAA	-19	NA	21527522	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566928_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580349_21580848_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.127	chr9	+	5440	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	143.870541746284	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1296	False	NA	20	True	AATAAA	-17	NA	21527523	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580349_21580850_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.128	chr9	+	5549	35	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-35	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_29	212.209983246829	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1297	False	NA	23	True	AATAAA	-20	NA	21527524	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.13	chr9	+	6834	17	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3336	17	NA	NA	-73	-18	intron_retention	FALSE	canonical	0	0	junction_15	427.647630758958	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTATTCACCCTCCAT	NA	False	NA	16	True	ATTAAA	-25	NA	21458116	21507248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21502729_21504367_21504445
ES.34552.130	chr9	+	5068	32	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-33	1	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	182.284491375558	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1299	False	NA	23	True	AATAAA	-20	NA	21527526	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.137	chr9	+	5430	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	142.672562376571	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1302	False	NA	23	True	AATAAA	-20	NA	21527529	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546054_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.14	chr9	+	3492	14	NNC	ENSMUSG00000032185.16	novel	3320	15	NA	NA	-70	-8	intron_retention	FALSE	canonical	0	0	junction_9	308.300955707148	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAGCCTGCAAAACA	NA	False	NA	12	True	AATAAA	-14	NA	21458119	21500755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497745_21497831_21498196_21498511_21498586_21498700_21498803_21498882_21499146
ES.34552.142	chr9	+	3272	14	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-22	-37283	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	171.920306293283	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGGTTTGTGTGGAC	1310	False	NA	NA	False	NA	NA	NA	21527537	21560241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21559157
ES.34552.145	chr9	+	5363	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_5	141.875053346834	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1311	False	NA	22	True	AATAAA	-19	NA	21527538	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548640_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.149	chr9	+	5559	33	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-13	2	intron_retention	FALSE	non_canonical	0	0	junction_28	137.883864033967	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTCCCTGGACTCCT	1319	False	NA	24	True	AATAAA	-21	NA	21527546	21614664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.150	chr9	+	5430	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	178.075029842602	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	1320	False	NA	21	True	AATAAA	-18	NA	21527547	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580351_21580848_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.153	chr9	+	5181	34	NNC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	160.709229299384	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1320	False	NA	22	True	AATAAA	-19	NA	21527547	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546093_21546981_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.154	chr9	+	5360	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	180.435881791889	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1321	False	NA	23	True	AATAAA	-20	NA	21527548	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548640_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553990_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.156	chr9	+	5246	33	NIC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	146.007594916968	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1324	False	NA	20	True	AATAAA	-17	NA	21527551	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.157	chr9	+	5210	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	190.065384332329	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1324	False	NA	20	True	AATAAA	-17	NA	21527551	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544220_21546124_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.159	chr9	+	5153	33	NIC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	139.911268616711	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1330	False	NA	22	True	AATAAA	-19	NA	21527557	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.16	chr9	+	2115	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-51	1156	-51	111	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGCTATGGGAACTTG	NA	False	NA	NA	False	NA	NA	NA	21458138	21499607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.161	chr9	+	5099	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	177.959483012631	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1332	False	NA	22	True	AATAAA	-19	NA	21527559	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21547149_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.162	chr9	+	5402	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	226.921259548096	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1332	False	NA	22	True	AATAAA	-19	NA	21527559	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566925_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581788_21581867_21583341_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.163	chr9	+	5165	33	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	0	-2	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_27	173.247832665917	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1332	False	NA	20	True	AATAAA	-17	NA	21527559	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.164	chr9	+	5534	33	NIC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	2	1	intron_retention	FALSE	canonical	3	423	junction_28	85.1284874469176	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1334	False	NA	23	True	AATAAA	-20	NA	21527561	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.165	chr9	+	5395	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	141.488609541319	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1336	False	NA	22	True	AATAAA	-19	NA	21527563	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550522_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.17	chr9	+	2697	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-43	566	-43	-566	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTAGTCCCTACTTTCTG	NA	False	NA	NA	False	NA	NA	NA	21458146	21500197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.170	chr9	+	5404	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	175.697575965588	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1339	False	NA	22	True	AATAAA	-19	NA	21527566	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566928_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.174	chr9	+	5523	34	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	177.881859454147	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1341	False	NA	20	True	AATAAA	-17	NA	21527568	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583221_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.182	chr9	+	5994	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	110	250	15	-250	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCCTGAATGTGTGT	1347	False	NA	NA	False	TTTAAA	-22	NA	21527574	21615263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.183	chr9	+	5380	34	NNC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.499358749706	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	1347	False	NA	21	True	AATAAA	-18	NA	21527574	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544103_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590230_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.187	chr9	+	4400	30	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	202.344862844648	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	1350	False	NA	20	True	AATAAA	-17	NA	21527577	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527618_21548602_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.189	chr9	+	5651	34	NNC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	21	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.709229299384	919	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTGTGTGAATGTT	1353	False	NA	NA	False	TTTAAA	-6	NA	21527580	21615247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21547149_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.19	chr9	+	1232	2	NNC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	-25	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAGCCTGCAAAACA	NA	False	NA	12	True	AATAAA	-14	NA	21458164	21500755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458294_21499652
ES.34552.190	chr9	+	5063	34	NNC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	160.709229299384	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	1355	False	NA	21	True	AATAAA	-18	NA	21527582	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21547149_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.195	chr9	+	5667	14	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	88	-34778	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	171.920306293283	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTGGTGTGCTGGG	1420	False	NA	NA	False	ATTAAA	-15	NA	21527647	21562746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21559157
ES.34552.197	chr9	+	5392	35	NIC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	111	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_26	187.333058322562	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	1443	False	NA	21	True	AATAAA	-18	NA	21527670	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.199	chr9	+	5410	34	NNC	ENSMUSG00000032187.17	novel	3800	27	NA	NA	-5382	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.280854956556	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	4451	False	NA	23	True	AATAAA	-20	NA	21541680	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21541813_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.2	chr9	+	176	2	Antisense	novelGene_ENSMUSG00000111812.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGATAAAAG	NA	False	NA	NA	False	NA	NA	NA	21452658	21521169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21452803_21521137
ES.34552.20	chr9	+	3327	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-25	6	intron_retention	FALSE	canonical	3	1025	junction_5	69.112338305996	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCAGGGTAGTCTCC	NA	False	NA	26	True	AATAAA	-28	NA	21458164	21500769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.200	chr9	+	5271	33	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	16538	0	-2965	0	3prime_fragment	FALSE	canonical	3	225	junction_28	116.733068900805	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	6868	False	NA	22	True	AATAAA	-19	NA	21544097	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.203	chr9	+	6135	33	NNC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	-2965	9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	161.35057122904	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCCCCAGTTCTGCCT	6868	False	NA	NA	False	AATAAA	-29	NA	21544097	21615535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550522_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.204	chr9	+	5256	33	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-2964	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	212.417959806692	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	6869	False	NA	23	True	AATAAA	-20	NA	21544098	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550016_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553999_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572160_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.206	chr9	+	5164	33	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-2859	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	180.049990345563	909	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCACCACTGGCTCCCT	6974	False	NA	16	True	AATAAA	-13	NA	21544203	21614656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570266_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.207	chr9	+	4580	32	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	-955	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.284491375558	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	983	False	NA	22	True	AATAAA	-19	NA	21546107	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21546163_21547203_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.21	chr9	+	9646	17	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3336	17	NA	NA	-25	-23	intron_retention	FALSE	canonical	3	163	junction_16	243.809792345898	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	NA	False	NA	11	True	ATTAAA	-20	NA	21458164	21507243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344_21504367_21504445
ES.34552.210	chr9	+	5536	31	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	19582	-12	-16	-1	3prime_fragment	FALSE	canonical	3	423	junction_25	89.0692364898728	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCCTATAAGCCCC	157	False	NA	NA	False	AATAAA	-19	NA	21547046	21615525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.214	chr9	+	4480	30	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	19918	1	415	-1	3prime_fragment	FALSE	canonical	3	225	junction_25	120.689290639844	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	588	False	NA	21	True	AATAAA	-18	NA	21547477	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.215	chr9	+	4497	30	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	1511	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	243.105272675962	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1684	False	NA	22	True	AATAAA	-19	NA	21548573	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580349_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.217	chr9	+	4136	28	ISM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	22542	865	2944	-1	3prime_fragment	FALSE	non_canonical	0	0	junction_22	148.906144200034	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	3117	False	NA	21	True	AATAAA	-18	NA	21550006	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.220	chr9	+	3360	23	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	6953	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_17	214.097206045207	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGGCTCCCTGGACT	7126	False	NA	21	True	AATAAA	-18	NA	21554015	21614661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.221	chr9	+	3308	22	ISM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	31448	866	11850	-2	3prime_fragment	FALSE	non_canonical	0	0	junction_16	165.507383151179	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	NA	False	NA	20	True	AATAAA	-17	NA	21558912	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.222	chr9	+	3815	21	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	19858	-286	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_15	194.541994181205	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTTTTTTAAATTATA	NA	False	NA	NA	False	NA	NA	NA	21566920	21615227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.226	chr9	+	2074	12	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	55777	0	36274	0	3prime_fragment	FALSE	canonical	3	225	junction_7	179.098384707843	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	NA	False	NA	22	True	AATAAA	-19	NA	21583336	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.227	chr9	+	1872	10	NNC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	39299	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	245.665887731817	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	NA	False	NA	22	True	AATAAA	-19	NA	21586361	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597307_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.228	chr9	+	1401	7	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	43156	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	332.95979069885	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACTGGCTCCCTGGAC	982	False	NA	20	True	AATAAA	-17	NA	21590218	21614660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.229	chr9	+	4735	6	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	66290	851	46692	0	3prime_fragment	FALSE	canonical	3	587	junction_1	91.4758984651148	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	820	False	NA	22	True	AATAAA	-19	NA	21593754	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.23	chr9	+	4898	16	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3220	16	NA	NA	-12	-903	intron_retention	FALSE	canonical	1	1	junction_14	366.525427342891	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGCTCTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	21458177	21506363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21503130_21504367_21504445
ES.34552.231	chr9	+	3813	5	NIC	ENSMUSG00000032187.17	novel	6376	34	NA	NA	47742	1	intron_retention	FALSE	canonical	3	587	junction_1	99.3538499505681	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGCTCCCTGGACTCC	1870	False	NA	23	True	AATAAA	-20	NA	21594804	21614663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21597572_21611095_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.232	chr9	+	3015	1	Intergenic	novelGene_28113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	869	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAGAGAGAAAAACACGT	NA	False	NA	NA	False	NA	NA	NA	21604921	21607936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21604900_21607900
ES.34552.233	chr9	+	174	1	Intergenic	novelGene_28115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	889	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21609761	21609935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21609800_21609900
ES.34552.24	chr9	+	3750	16	NIC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	11	junction_3	288.484361216803	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458179	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.25	chr9	+	3516	15	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-10	0	intron_retention	FALSE	canonical	2	5	junction_14	299.886747330538	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458179	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21499216_21499323
ES.34552.26	chr9	+	3214	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	291.154682065889	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAGCCTGCAAAACA	NA	False	NA	12	True	AATAAA	-14	NA	21458179	21500755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486717_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.27	chr9	+	3305	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	290.911869052391	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGGTAGTCTCCAGGG	NA	False	NA	30	True	AATAAA	-32	NA	21458180	21500773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486643_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.29	chr9	+	5769	16	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3220	16	NA	NA	-4	-24	intron_retention	FALSE	canonical	1	1	junction_14	366.525427342891	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATAGTCTTATTCACC	NA	False	NA	10	True	ATTAAA	-19	NA	21458185	21507242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21503130_21504367_21504445
ES.34552.3	chr9	+	3480	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	-248	-12	-248	-8	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTAGTCTCCAGGGTC	NA	False	NA	32	True	AATAAA	-34	NA	21457941	21500775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.30	chr9	+	3226	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	290.969001785414	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458185	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499335
ES.34552.31	chr9	+	4532	15	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3152	15	NA	NA	-2	-23	multi-exon	TRUE	canonical	3	12	junction_14	298.130886541808	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	NA	False	NA	11	True	ATTAAA	-20	NA	21458187	21507243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21504445
ES.34552.34	chr9	+	3012	14	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	397.38804012938	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458190	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498420_21498511_21498586_21498700_21498803_21498882_21499344
ES.34552.35	chr9	+	3305	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	1025	junction_5	67.9387479233151	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458190	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.36	chr9	+	3484	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	1025	junction_5	68.1339092657741	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458190	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21499216_21499344
ES.34552.37	chr9	+	3943	14	NIC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	11	junction_3	307.812092068633	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458191	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498700_21498803_21498882_21499146
ES.34552.39	chr9	+	3226	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	289.43062880229	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458191	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494441_21494813_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.4	chr9	+	3870	14	FSM	ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	-276	-9	-247	9	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGGGTAGTCTCCAGG	NA	False	NA	29	True	AATAAA	-31	NA	21457942	21500772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
ES.34552.42	chr9	+	5837	15	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3152	15	NA	NA	6	-25	intron_retention	FALSE	canonical	1	1	junction_14	300.890345474892	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATAGTCTTATTCAC	NA	False	NA	9	True	ATTAAA	-18	NA	21458195	21507241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21503130
ES.34552.43	chr9	+	5499	16	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3220	16	NA	NA	6	-23	intron_retention	FALSE	canonical	1	8	junction_14	365.257571219726	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTCTTATTCACCC	NA	False	NA	11	True	ATTAAA	-20	NA	21458195	21507243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21503391_21504367_21504445
ES.34552.44	chr9	+	3876	13	NNC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	7	0	intron_retention	TRUE	canonical	0	0	junction_8	431.037089149208	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458196	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21495991_21496099_21497462_21497549_21497740_21497831_21498196_21498700_21498803
ES.34552.45	chr9	+	4698	16	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3220	16	NA	NA	9	-28	multi-exon	FALSE	canonical	1	1	junction_14	366.525427342891	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATGAAATAGTCTTATT	NA	False	NA	6	True	ATTAAA	-15	NA	21458198	21507238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21504184_21504367_21504445
ES.34552.46	chr9	+	3200	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	289.43062880229	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAGCCTGCAAAACA	NA	False	NA	12	True	AATAAA	-14	NA	21458198	21500755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494430_21494813_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.47	chr9	+	3232	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	289.755728540821	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458198	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499323
ES.34552.48	chr9	+	2997	14	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	311.618736096517	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458200	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.5	chr9	+	3604	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115394.8	3320	15	-272	-12	-243	-8	multi-exon	FALSE	canonical	3	1025	junction_5	69.6438461468237	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTAGTCTCCAGGGTC	NA	False	NA	32	True	AATAAA	-34	NA	21457946	21500775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146
ES.34552.51	chr9	+	3989	15	NIC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	11	junction_3	298.577691321877	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458205	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21499216_21499344
ES.34552.52	chr9	+	3183	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	291.264568543599	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAAAGCCTGCAAAAC	NA	False	NA	11	True	AATAAA	-13	NA	21458207	21500754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490704_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.53	chr9	+	3379	17	NNC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	379.351332663733	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458207	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480134_21480312_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.54	chr9	+	10074	14	FSM	ENSMUSG00000048429.11_ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	-10	-6479	0	-24	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATAGTCTTATTCACC	NA	False	NA	10	True	ATTAAA	-19	NA	21458208	21507242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
ES.34552.55	chr9	+	3281	17	NNC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	379.482357132713	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458208	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486277_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.56	chr9	+	3732	16	NNC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	0	-7	intron_retention	FALSE	canonical	1	1	junction_10	448.789255169457	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458208	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498174_21498335_21498424_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.57	chr9	+	3356	14	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	0	-7	intron_retention	FALSE	canonical	3	1025	junction_5	69.8437817286109	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458208	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.58	chr9	+	5140	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	19	-1939	0	-1217	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAACCCCCATTTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	21458208	21502702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.59	chr9	+	3121	17	NNC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	282.019281255733	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458208	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344_21499846_21499918
ES.34552.60	chr9	+	3184	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	291.211828209104	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458209	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498693_21498812_21498882_21499146_21499216_21499344
ES.34552.61	chr9	+	5569	15	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3152	15	NA	NA	1	-18	intron_retention	FALSE	canonical	1	8	junction_14	299.134167222669	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTATTCACCCTCCAT	NA	False	NA	16	True	ATTAAA	-25	NA	21458209	21507248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21503391
ES.34552.65	chr9	+	8785	16	FSM	ENSMUSG00000048429.11_ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	28	-5593	-1	-910	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTCCTTTTAGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	21458217	21506356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.67	chr9	+	1948	12	NIC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	2	-459	intron_retention	FALSE	canonical	3	1025	junction_5	73.1912472751076	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTCGCTGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	21458220	21498966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498700_21498803
ES.34552.7	chr9	+	3284	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	-131	-1	-112	1	multi-exon	FALSE	canonical	3	70	junction_14	283.604972827073	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGGGTCCAAGAATCC	NA	False	NA	41	True	AATAAA	-43	NA	21458077	21500784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
ES.34552.71	chr9	+	3171	14	NNC	ENSMUSG00000032185.16	novel	3320	15	NA	NA	8	-7	intron_retention	FALSE	canonical	0	0	junction_5	410.632878550592	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458226	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490810_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498420_21498511_21498586_21498700_21498803_21498882_21499146
ES.34552.72	chr9	+	4560	16	Fusion	ENSMUSG00000048429.11_ENSMUSG00000032185.16	novel	3220	16	NA	NA	8	-25	multi-exon	FALSE	canonical	0	0	junction_15	290.969001785414	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATAGTCTTATTCAC	NA	False	NA	9	True	ATTAAA	-18	NA	21458226	21507241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21504445
ES.34552.73	chr9	+	2713	13	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	8	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	324.229085678629	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGCTTTGTAAGAAAA	NA	False	NA	0	True	AATAAA	-2	NA	21458226	21500743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480852_21491706_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.74	chr9	+	2156	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	38	1026	9	241	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTGTTCTGTACTCTC	NA	False	NA	NA	False	NA	NA	NA	21458227	21499737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.75	chr9	+	3491	13	NIC	ENSMUSG00000032185.16	novel	3320	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	1025	junction_5	73.0256328665186	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458227	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498882_21499146
ES.34552.77	chr9	+	4470	12	NIC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	1025	junction_4	74.547450084155	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458229	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498700_21498803
ES.34552.78	chr9	+	3171	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	11	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	290.969001785414	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGCTTTGTAAGAAAA	NA	False	NA	0	True	AATAAA	-2	NA	21458229	21500743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499227_21499344
ES.34552.79	chr9	+	2856	13	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	311.456078587156	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458235	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.8	chr9	+	3207	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-97	8	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	291.600903178803	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCAAGAATCCTCCCATC	NA	False	NA	48	True	AAGAAA	-30	NA	21458092	21500791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.80	chr9	+	3468	13	NIC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	20	-7	intron_retention	FALSE	canonical	0	0	junction_11	323.415582322325	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458238	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498586_21498700_21498803
ES.34552.81	chr9	+	4054	11	NIC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	20	-458	intron_retention	FALSE	canonical	0	0	junction_4	353.569003166284	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCGCTGTCATGGTC	NA	False	NA	NA	False	NA	NA	NA	21458238	21498967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21494334_21494426_21494806_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
ES.34552.82	chr9	+	2363	17	NNC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	282.019281255733	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458243	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344_21499894_21500689
ES.34552.83	chr9	+	1360	2	NNC	ENSMUSG00000032185.16	novel	604	6	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAGAAAAGCCTGCAAAA	NA	False	NA	10	True	AATAAA	-12	NA	21458268	21500753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21499651
ES.34552.84	chr9	+	5696	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	7	-7	intron_retention	FALSE	canonical	3	1025	junction_5	69.4525605234631	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458280	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.85	chr9	+	3373	13	NIC	ENSMUSG00000032185.16	novel	3585	14	NA	NA	19	0	intron_retention	FALSE	canonical	3	16	junction_10	314.205302664074	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458292	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498420_21498511_21498586_21498700_21498803
ES.34552.86	chr9	+	2855	16	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-46	-7	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_15	288.542744763329	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	False	NA	13	True	AATAAA	-15	NA	21458407	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499484
ES.34552.87	chr9	+	2861	15	NNC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	463.11011605431	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458469	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494430_21494813_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498693_21498803_21498882_21499344
ES.34552.88	chr9	+	3162	16	NNC	ENSMUSG00000032185.16	novel	485	4	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	289.719174374082	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458847	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21459127_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.89	chr9	+	3039	15	NNC	ENSMUSG00000032185.16	novel	485	4	NA	NA	448	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	391.397313663312	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458901	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21459127_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
ES.34552.9	chr9	+	3189	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	-95	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_1	289.6445393645	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458094	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21458527_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.90	chr9	+	3012	16	NNC	ENSMUSG00000032185.16	novel	485	4	NA	NA	10649	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	289.719174374082	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21469102	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21469232_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.91	chr9	+	2436	11	ISM	ENSMUSG00000032185.16	ENSMUST00000130032.8	3336	17	33329	0	5203	0	3prime_fragment	FALSE	canonical	3	1074	junction_6	66.6334000333166	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	233	False	NA	20	True	AATAAA	-22	NA	21491602	21500763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.92	chr9	+	1993	7	ISM	ENSMUSG00000032185.16	ENSMUST00000130032.8	3336	17	39464	7	-776	-7	3prime_fragment	FALSE	canonical	3	1074	junction_2	71.9523376193497	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	6368	False	NA	13	True	AATAAA	-15	NA	21497737	21500756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ES.34552.93	chr9	+	1563	3	ISM	ENSMUSG00000032185.16	ENSMUST00000132011.2	485	4	289	-1263	104	-4	3prime_fragment	FALSE	canonical	3	1077	junction_1	17.5	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTGCAAAACAGCAG	7433	False	NA	16	True	AATAAA	-18	NA	21498802	21500759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21498882_21499146_21499216_21499344
ES.34552.94	chr9	+	6280	36	Fusion	ENSMUSG00000032187.17_ENSMUSG00000048429.11	novel	3800	27	NA	NA	216	0	multi-exon	FALSE	non_canonical	0	0	junction_2	245.473742724852	1107	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	4727	False	NA	22	True	AATAAA	-19	NA	21504233	21614662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21504367_21504445_21505198_21524311_21524426_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580349_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.95	chr9	+	4477	1	Genic_Genomic	ENSMUSG00000048429.11	novel	NA	NA	NA	NA	230	1458	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGAGGGCTGGGG	4741	False	NA	NA	False	NA	NA	NA	21504247	21508724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_21504200_21508700
ES.34552.96	chr9	+	238	1	Intergenic	novelGene_28109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAGAGCAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	21520993	21521231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21521000_21521200
ES.34552.98	chr9	+	5403	34	NNC	ENSMUSG00000032187.17	novel	6354	34	NA	NA	-114	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.847511343585	917	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGCTGTCAGCAGTGG	1123	False	NA	39	True	AATAAA	-36	NA	21527350	21614679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21527466_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34552.99	chr9	+	5573	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	-68	849	-68	2	multi-exon	FALSE	canonical	3	423	junction_28	87.1904283674422	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTCCCTGGACTCCT	1169	False	NA	24	True	AATAAA	-21	NA	21527396	21614664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ES.34553.1	chr9	-	2202	1	Antisense	novelGene_ENSMUSG00000057191.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21457507	21455305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21455300_21457500
ES.34554.1	chr9	-	4057	2	Antisense	novelGene_ENSMUSG00000032185.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTGTTCAGTGTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	21466765	21462039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21463544_21464212
ES.34555.1	chr9	-	1546	10	NNC	ENSMUSG00000032182.16	novel	2014	9	NA	NA	6	31931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.6829135712557	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATTTAGCCGGGTGTG	6092	False	NA	NA	False	NA	NA	NA	21504100	21468046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21468544_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ES.34555.10	chr9	-	2003	9	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-4	-23	intron_retention	FALSE	canonical	3	27	junction_8	22.544400635191	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	6064	False	NA	-43	True	NA	NA	NA	21504128	21500004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ES.34555.12	chr9	-	1895	8	NIC	ENSMUSG00000032182.16	novel	2014	9	NA	NA	-3	-23	intron_retention	FALSE	canonical	2	3	junction_7	31.707206417083	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	6121	False	NA	-43	True	NA	NA	NA	21504071	21500004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21504022
ES.34555.13	chr9	-	1818	9	FSM	ENSMUSG00000032182.16	ENSMUST00000213809.2	1883	9	42	23	-2	-23	multi-exon	FALSE	canonical	2	3	junction_8	29.6690073982936	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	6122	False	NA	-43	True	NA	NA	NA	21504070	21500004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21504022
ES.34555.14	chr9	-	1875	8	NNC	ENSMUSG00000032182.16	novel	2174	8	NA	NA	31	-23	intron_retention	FALSE	canonical	0	0	junction_1	32.6865134767431	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	6155	False	NA	-43	True	NA	NA	NA	21504037	21500004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21500872_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ES.34555.16	chr9	-	1156	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-3	-747	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGATCCAGAGAATTT	6121	False	NA	NA	False	NA	NA	NA	21504071	21500728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ES.34555.17	chr9	-	1139	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	4	751	4	-747	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGATCCAGAGAATTT	6128	False	NA	NA	False	NA	NA	NA	21504064	21500728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ES.34555.18	chr9	-	1232	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	35	747	-3	-747	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGATCCAGAGAATTT	6121	False	NA	NA	False	NA	NA	NA	21504071	21500728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ES.34555.2	chr9	-	1477	1	Antisense	novelGene_ENSMUSG00000032185.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	ATTAAA	-7	NA	21486446	21484969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21485000_21486400
ES.34555.3	chr9	-	3911	1	Antisense	novelGene_ENSMUSG00000032185.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAAAGCTTTAATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	21493981	21490070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21490100_21494000
ES.34555.4	chr9	-	2060	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	-28	-18	-10	14	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGTGGCCTGGTAGT	6058	False	NA	-2	True	AATAAA	-31	NA	21504134	21499963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ES.34555.5	chr9	-	1922	10	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-9	9	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	17.7478915457862	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGACCATGTGGCCTG	6115	False	NA	-7	True	AATAAA	-26	NA	21504077	21499968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ES.34555.6	chr9	-	2097	9	NNC	ENSMUSG00000032182.16	novel	1883	9	NA	NA	181	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	29.9726437772846	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6305	False	NA	-12	True	AATAAA	-21	NA	21503887	21499973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503591
ES.34555.7	chr9	-	1919	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	-21	-4	17	4	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6103	False	NA	-12	True	AATAAA	-21	NA	21504089	21499973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ES.34555.9	chr9	-	1899	9	NIC	ENSMUSG00000032182.16	novel	1894	10	NA	NA	-6	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	29.0635080470338	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCATGGTGACCATGTG	6062	False	NA	-12	True	AATAAA	-21	NA	21504130	21499973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21504032
ES.34556.1	chr9	-	198	1	Intergenic	novelGene_28108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATTTAATTAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	21510646	21510448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21510400_21510600
ES.34557.1	chr9	-	173	1	Intergenic	novelGene_28110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	21531297	21531124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21531100_21531300
ES.34558.1	chr9	-	174	1	Intergenic	novelGene_28111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATC	NA	False	NA	NA	False	NA	NA	NA	21540176	21540002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21540000_21540200
ES.34559.1	chr9	-	1167	1	Antisense	novelGene_ENSMUSG00000032187.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGATCCATTAAGAGA	NA	False	NA	NA	False	NA	NA	NA	21544372	21543205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_21543200_21544400
ES.3456.1	chr10	+	161	1	Intergenic	novelGene_2662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	83372390	83372551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83372400_83372600
ES.34560.1	chr9	-	179	1	Intergenic	novelGene_28112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATCAAGAA	NA	False	NA	NA	False	NA	NA	NA	21593514	21593335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21593300_21593500
ES.34561.1	chr9	-	1484	1	Intergenic	novelGene_28114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTCCCTTAAGCTGT	8087	False	NA	NA	False	NA	NA	NA	21608374	21606890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21606900_21608400
ES.34562.1	chr9	+	1507	1	Intergenic	novelGene_28116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	53	False	NA	NA	False	NA	NA	NA	21616224	21617731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21616200_21617700
ES.34562.2	chr9	+	138	1	Intergenic	novelGene_28117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTTCTAGGGACTG	28	False	NA	NA	False	NA	NA	NA	21616397	21616535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21616400_21616500
ES.34563.1	chr9	+	4690	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	-60	-3	-60	3	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCCTTATGTGTGTGA	1713	False	NA	19	True	ATTAAA	-18	NA	21634718	21661218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.10	chr9	+	5828	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	262	junction_7	35.468240635109	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1918	False	NA	16	True	ATTAAA	-15	NA	21634923	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.12	chr9	+	4591	19	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	130.201126467221	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTCATCCTTATG	1919	False	NA	12	True	ATTAAA	-11	NA	21634924	21661211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643045_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21651790_21651911_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657030_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.14	chr9	+	3434	17	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	84.188683176541	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCATCCTTATGT	1919	False	NA	13	True	ATTAAA	-12	NA	21634924	21661212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21660322
ES.34563.15	chr9	+	2891	10	FSM	ENSMUSG00000032193.10	ENSMUST00000217111.2	2854	10	-10	-27	-3	27	multi-exon	FALSE	canonical	3	262	junction_7	24.2807651352991	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGGTGGTGGTGCAA	1919	False	NA	NA	False	NA	NA	NA	21634924	21652325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944
ES.34563.16	chr9	+	1661	4	NNC	ENSMUSG00000032193.10	novel	1739	7	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	150.281957222638	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	1919	False	NA	NA	False	NA	NA	NA	21634924	21652283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643042_21643166_21643607_21644256_21651609
ES.34563.17	chr9	+	4412	18	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	80.264959152921	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTTTGTCATCCTTAT	1919	False	NA	11	True	ATTAAA	-10	NA	21634924	21661210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657136_21657655_21657736_21658444_21658603_21659436
ES.34563.18	chr9	+	5190	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	262	junction_7	35.2701626732852	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1919	False	NA	16	True	ATTAAA	-15	NA	21634924	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21658603_21659436
ES.34563.19	chr9	+	4460	18	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	103.99251370447	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTTGTCATCCTTA	1919	False	NA	10	True	ATTAAA	-9	NA	21634924	21661209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643045_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657724_21658444_21658603_21659436
ES.34563.2	chr9	+	4317	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	104	206	-12	-201	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGCACCTCTCTGCAA	1877	False	NA	11	True	ATTAAA	-24	NA	21634882	21661009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.20	chr9	+	4640	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	262	junction_7	32.4388246357663	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1926	False	NA	16	True	ATTAAA	-15	NA	21634931	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.21	chr9	+	5426	16	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-2	-207	intron_retention	FALSE	canonical	3	262	junction_7	33.1497611856657	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGATTGCTGCACCTCT	1927	False	NA	5	True	ATTAAA	-18	NA	21634932	21661003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21658603_21659436
ES.34563.22	chr9	+	4529	19	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.361707969133	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1927	False	NA	16	True	ATTAAA	-15	NA	21634932	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21636242_21636299_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.23	chr9	+	4997	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	262	junction_6	35.3738405287014	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTCATCCTTATG	1930	False	NA	12	True	ATTAAA	-11	NA	21634935	21661211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.24	chr9	+	2936	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	157	1534	1	-1529	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGGCTACTGGCTGTG	1930	False	NA	NA	False	NA	NA	NA	21634935	21659681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.25	chr9	+	4791	8	NNC	ENSMUSG00000032193.10	novel	2854	10	NA	NA	2	27	intron_retention	FALSE	canonical	3	25	junction_1	101.165251758029	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGGTGGTGGTGCAA	1933	False	NA	NA	False	NA	NA	NA	21634938	21652325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643045_21643166_21643607_21645171_21646532_21646656_21648515_21648639_21649169_21650277_21650681_21650854_21650944
ES.34563.26	chr9	+	4076	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	2	-212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	82.5801693810324	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACCCTGATTGCTGCA	1933	False	NA	0	True	ATTAAA	-13	NA	21634938	21660998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657657_21657736_21658444_21658603_21659436
ES.34563.28	chr9	+	2194	2	NNC	ENSMUSG00000032193.10	novel	1739	7	NA	NA	6	-2097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAACAA	1937	False	NA	NA	False	NA	NA	NA	21634942	21647731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21636795_21647389
ES.34563.30	chr9	+	2011	1	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	14	-12867	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGGAAAAGA	1945	False	NA	NA	False	NA	NA	NA	21634950	21636961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635000_21637000
ES.34563.32	chr9	+	4288	19	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	80.0055553626677	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1994	False	NA	16	True	ATTAAA	-15	NA	21634999	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436_21660954_21661071
ES.34563.33	chr9	+	4262	17	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	8261	6	-4363	-1	3prime_fragment	FALSE	canonical	3	262	junction_6	35.3314108655457	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTTGTCATCCTTA	2086	False	NA	10	True	ATTAAA	-9	NA	21643039	21661209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.34	chr9	+	4118	8	NNC	ENSMUSG00000032193.10	novel	4318	17	NA	NA	-1196	2634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	109.764497438649	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTAGGGTGGAAATTGA	5253	False	NA	NA	False	NA	NA	NA	21646206	21654932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21652327_21652835_21653602_21653952
ES.34563.35	chr9	+	3435	15	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-777	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	90.1690306126924	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	5672	False	NA	16	True	ATTAAA	-15	NA	21646625	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436_21659872_21659978
ES.34563.36	chr9	+	3510	13	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	13736	3	1112	1	3prime_fragment	FALSE	canonical	3	262	junction_2	39.686969594006	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCATCCTTATGT	7561	False	NA	13	True	ATTAAA	-12	NA	21648514	21661212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.37	chr9	+	3283	11	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	15355	3	2731	1	3prime_fragment	FALSE	canonical	3	266	junction_2	39.1163648617813	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCATCCTTATGT	9180	False	NA	13	True	ATTAAA	-12	NA	21650133	21661212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.39	chr9	+	5663	6	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	-3639	2	intron_retention	FALSE	non_canonical	0	0	junction_1	139.975712178935	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTCATCCTTATGTG	NA	False	NA	14	True	ATTAAA	-13	NA	21652979	21661213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21654517_21654922_21655360_21655525_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.40	chr9	+	280	2	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	18635	7018	-3056	1895	internal_fragment	FALSE	canonical	3	340	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATGGAGTTGATTGAT	NA	False	NA	NA	False	NA	NA	NA	21653562	21654193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21653602_21653952
ES.34563.41	chr9	+	2485	6	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	20437	4	-1403	0	3prime_fragment	FALSE	canonical	3	272	junction_5	38.0683595653924	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTCATCCTTATG	NA	False	NA	12	True	ATTAAA	-11	NA	21655215	21661211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.6	chr9	+	4369	17	NIC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	84.2166105943477	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTTTGTCATCCTTA	1902	False	NA	10	True	ATTAAA	-9	NA	21634907	21661209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.7	chr9	+	4485	18	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.3046917480226	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTTTGTCATCCTTAT	1903	False	NA	11	True	ATTAAA	-10	NA	21634908	21661210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648643_21649180_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34563.9	chr9	+	4328	17	FSM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	-6	-4	-6	0	multi-exon	FALSE	canonical	0	0	junction_13	82.5801693810324	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1916	False	NA	16	True	ATTAAA	-15	NA	21634921	21661215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ES.34564.1	chr9	-	4758	2	ISM	ENSMUSG00000074476.7	ENSMUST00000214149.2	356	4	15	-1705	-5	8	intron_retention	FALSE	canonical	3	2279	junction_1	0	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCAGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	21671583	21666729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21668490_21668585
ES.34564.12	chr9	-	1998	5	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-9	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	961.498049920019	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	21671608	21666739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21666902_21667097_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.13	chr9	-	2219	3	NNC	ENSMUSG00000074476.7	novel	356	4	NA	NA	2	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	79	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	21671576	21666739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21666902_21667097_21669126_21671547
ES.34564.14	chr9	-	1319	4	NNC	ENSMUSG00000074476.7	novel	627	4	NA	NA	-5	-13	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	1006.10679795382	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACTCTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21671583	21666750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21667592_21668526_21668691_21668980_21669126_21671414
ES.34564.15	chr9	-	815	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	-15	566	-15	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTCTGCATGTGT	NA	False	NA	0	True	NA	NA	NA	21671614	21667303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.16	chr9	-	1731	3	FSM	ENSMUSG00000074476.7	ENSMUST00000217382.2	1696	3	-35	0	-14	0	multi-exon	FALSE	canonical	3	1938	junction_2	208.5	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTCTGCATGTGT	NA	False	NA	0	True	NA	NA	NA	21671613	21667303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21668691_21668980_21669126_21671414
ES.34564.18	chr9	-	630	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	7	-10	6	8	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTTATCTACTTGCTT	NA	False	NA	-12	True	ATTAAA	-22	NA	21671592	21667389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
ES.34564.2	chr9	-	1409	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	-42	-1	-42	1	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTGTGTGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	21671641	21666736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.21	chr9	-	1891	2	NIC	ENSMUSG00000074476.7	novel	1696	3	NA	NA	2	1	intron_retention	FALSE	canonical	3	1938	junction_1	0	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTCATTGATTTATCTA	NA	False	NA	-19	True	ATTAAA	-15	NA	21671576	21667396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21669126_21671414
ES.34564.22	chr9	-	690	4	NNC	ENSMUSG00000074476.7	novel	627	4	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	1006.10679795382	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGTTCATTGATTTATC	NA	False	NA	-21	True	ATTAAA	-13	NA	21671602	21667398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21667592_21668526_21668691_21668980_21669126_21671414
ES.34564.23	chr9	-	582	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGTTCATTGATTTATC	NA	False	NA	-21	True	ATTAAA	-13	NA	21671609	21667398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
ES.34564.29	chr9	-	664	4	NIC	ENSMUSG00000074476.7	novel	356	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	158	junction_3	1013.36699505493	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGTTCATTGATTT	NA	False	NA	-24	True	ATTAAA	-10	NA	21671598	21667401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21667592_21668412_21668691_21668980_21669126_21671547
ES.34564.3	chr9	-	1226	5	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_4	926.927552454883	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671592	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671547
ES.34564.30	chr9	-	609	5	NNC	ENSMUSG00000074476.7	novel	356	4	NA	NA	1	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	961.498049920019	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGATCCATCTA	NA	False	NA	NA	False	NA	NA	NA	21671597	21667875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21667975_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.4	chr9	-	2176	3	NIC	ENSMUSG00000074476.7	novel	356	4	NA	NA	-26	0	intron_retention	FALSE	canonical	3	158	junction_2	1098.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671625	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21668691_21668980_21669126_21671547
ES.34564.6	chr9	-	1022	6	NNC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	894.372495104808	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671603	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21667014_21667361_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.7	chr9	-	2260	3	FSM	ENSMUSG00000074476.7	ENSMUST00000217382.2	1696	3	2	-566	2	0	multi-exon	FALSE	canonical	3	1938	junction_2	208.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671576	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21668691_21668980_21669126_21671414
ES.34564.8	chr9	-	2174	4	NIC	ENSMUSG00000074476.7	novel	1366	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1938	junction_3	181.336397032942	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671586	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21668490_21668585_21668691_21668980_21669126_21671414
ES.34564.9	chr9	-	2141	3	NNC	ENSMUSG00000074476.7	novel	356	4	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	79	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671602	21666737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21668677_21668978_21669126_21671547
ES.34565.1	chr9	+	253	1	Intergenic	novelGene_28119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCAGTTTTGATCTGAA	6573	False	NA	NA	False	NA	NA	NA	21702196	21702449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21702200_21702400
ES.34566.1	chr9	-	5147	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	30	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	160.577149163053	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTTCTCCTTCTTT	NA	False	NA	0	True	AATAAA	-27	NA	21710010	21678067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709016_21709142_21709777
ES.34566.10	chr9	-	5125	11	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-4	2	intron_retention	FALSE	non_canonical	0	0	junction_10	130.725513959594	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTCGTGTCTGTTTGTT	NA	False	NA	-10	True	AATAAA	-17	NA	21710044	21678077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707495_21709784
ES.34566.14	chr9	-	7847	10	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	886	2	intron_retention	FALSE	canonical	3	374	junction_7	34.1156348791852	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTCGTGTCTGTTTGTT	NA	False	NA	-10	True	AATAAA	-17	NA	21708913	21678077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375
ES.34566.15	chr9	-	3477	10	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	16303	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	136.679764503351	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTCGTGTCTGTTTGT	NA	False	NA	-11	True	AATAAA	-16	NA	21693496	21678078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21693455
ES.34566.17	chr9	-	5642	10	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_9	132.68769608128	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21709811	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.18	chr9	-	4890	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	30	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	160.759568576458	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21710010	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21678585_21678704_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.2	chr9	-	5087	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	-35	-12	-35	12	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTTCTCCTTCTTT	NA	False	NA	0	True	AATAAA	-27	NA	21710075	21678067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.20	chr9	-	4766	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.104985545814	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21709835	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685897_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.21	chr9	-	3489	10	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	16374	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	136.679764503351	711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21693425	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21693371
ES.34566.22	chr9	-	3989	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	165.717872370908	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21709835	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706132_21707373_21707491_21709777
ES.34566.23	chr9	-	4723	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	2306	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.069113932015	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21707493	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21679289_21679345_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375
ES.34566.24	chr9	-	4794	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	165.717872370908	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21709822	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707403_21707491_21709777
ES.34566.25	chr9	-	3773	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	182.873058583148	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21709820	21678079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681419_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21705831_21706873_21706980_21707375_21707491_21709777
ES.34566.27	chr9	-	4808	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	167.484648365205	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTGCCTCGTGTCTGTT	NA	False	NA	-14	True	AATAAA	-13	NA	21709814	21678081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691227_21691670_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709778
ES.34566.28	chr9	-	4744	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.759568576458	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTGCCTCGTGTCTGTT	NA	False	NA	-14	True	AATAAA	-13	NA	21709822	21678081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21678645_21678720_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.29	chr9	-	4808	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-28	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	165.492003751798	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709850	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21691967_21705752_21706980_21707375_21707491_21709777
ES.34566.3	chr9	-	4980	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	1	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	126.069113932015	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTTCTCCTTCTTT	NA	False	NA	0	True	AATAAA	-27	NA	21709821	21678067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707638_21709777
ES.34566.32	chr9	-	5226	13	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	0	-9	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	160.759568576458	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21710040	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21708271_21708467_21709777
ES.34566.33	chr9	-	4956	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	551	-9	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_11	121.919022034645	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709248	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709060
ES.34566.34	chr9	-	4663	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.759568576458	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709822	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21679713_21679861_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707486_21709773
ES.34566.35	chr9	-	7862	10	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-13	-9	intron_retention	FALSE	canonical	3	374	junction_7	30.3380134769631	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709835	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375
ES.34566.36	chr9	-	4894	11	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	1	-9	intron_retention	FALSE	canonical	0	0	junction_10	130.725513959594	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709821	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21680301_21681049_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.38	chr9	-	4260	9	ISM	ENSMUSG00000032194.10	ENSMUST00000216008.2	3433	11	3125	-1269	3125	-9	3prime_fragment	FALSE	canonical	0	0	junction_5	146.402217793994	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21706674	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21690996_21691234_21691674_21691766_21691855_21692000_21705752
ES.34566.39	chr9	-	5436	10	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	11	-9	intron_retention	FALSE	canonical	0	0	junction_9	133.06009038897	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709811	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21709777
ES.34566.4	chr9	-	5079	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	25	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	162.314662266774	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGTGTCTGTTTGTTCTC	NA	False	NA	-7	True	AATAAA	-20	NA	21710015	21678074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680360_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.40	chr9	-	3910	7	NNC	ENSMUSG00000032194.10	novel	3433	11	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.861783533092	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709816	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681354_21691904_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.42	chr9	-	5154	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.694257697078	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21710029	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680435_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.43	chr9	-	4740	13	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-11	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	160.759568576458	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTGCCTCGT	NA	False	NA	-21	True	AATAAA	-6	NA	21709833	21678088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21678621_21678704_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.44	chr9	-	3439	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	22	1579	22	-301	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTGCCTCCAGTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	21710018	21679658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.45	chr9	-	3298	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	-18	1760	-18	-482	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCCTCATCTTTAC	NA	False	NA	NA	False	NA	NA	NA	21710058	21679839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.46	chr9	-	3120	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-13	-496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	162.314662266774	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTACAGTGTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	21709835	21679853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680360_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.47	chr9	-	3098	8	ISM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	190	6846	-28	-5568	5prime_fragment	FALSE	canonical	0	0	junction_7	142.480789969048	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAAGGTGCCGGGCATGG	NA	False	NA	NA	False	NA	NA	NA	21709850	21684925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.49	chr9	-	2064	1	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	22809	-5569	mono-exon	FALSE	NA	NA	NA	NA	NA	595	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAAGGTGCCGGGCATG	NA	False	NA	NA	False	NA	NA	NA	21686990	21684926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21684900_21687000
ES.34566.50	chr9	-	3910	7	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	1251	-5569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	148.244917469556	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAAGGTGCCGGGCATG	NA	False	NA	NA	False	NA	NA	NA	21708548	21684926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707547
ES.34566.53	chr9	-	3189	1	Intergenic	novelGene_28118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	21690373	21687184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21687200_21690400
ES.34566.54	chr9	-	3215	7	NNC	ENSMUSG00000032194.10	novel	399	4	NA	NA	-27	-10082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.257918471523	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACATACACACAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	21709849	21689439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21689627_21689858_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709773
ES.34566.6	chr9	-	4905	11	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	24	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	131.012060513527	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCGTGTCTGTTTGTTCT	NA	False	NA	-8	True	AATAAA	-19	NA	21710016	21678075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21709777
ES.34566.7	chr9	-	5816	11	NIC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-24	3	intron_retention	FALSE	canonical	0	0	junction_10	128.010780795994	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGTGTCTGTTTGTTC	NA	False	NA	-9	True	AATAAA	-18	NA	21710064	21678076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ES.34566.8	chr9	-	4401	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	165.717872370908	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGTGTCTGTTTGTTC	NA	False	NA	-9	True	AATAAA	-18	NA	21709801	21678076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706577_21707375_21707491_21709777
ES.34567.1	chr9	+	177	1	Intergenic	novelGene_28120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAT	3118	False	NA	NA	False	NA	NA	NA	21738788	21738965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21738800_21739000
ES.34568.1	chr9	+	5479	1	Genic_Genomic	ENSMUSG00000047822.9	novel	NA	NA	NA	NA	-2615	1026	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAGA	185	False	NA	NA	False	NA	NA	NA	21744190	21749669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_21744200_21749700
ES.34569.1	chr9	-	4805	26	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	3394	-6	intron_retention	FALSE	non_canonical	0	0	junction_6	55.1031614338052	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATTTTTTTCTCCTC	NA	False	NA	NA	False	NA	NA	NA	21741529	21711161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509
ES.34569.10	chr9	-	6463	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.733186790872	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6252	False	NA	NA	False	TTTAAA	-18	NA	21763935	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.100	chr9	-	3860	21	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-2741	-5	intron_retention	FALSE	canonical	3	8	junction_6	53.4999766355089	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACCTGTGTGGTGTGCT	NA	False	NA	NA	False	TTTAAA	-13	NA	21731952	21711480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817
ES.34569.102	chr9	-	6736	50	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	58.3800471411816	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACCTGTGTGGTGTGCT	6270	False	NA	NA	False	TTTAAA	-13	NA	21763917	21711480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715713_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21741758_21741855_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.103	chr9	-	5807	29	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	744	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	63.4740425814573	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACAACCTGTGTGGTG	NA	False	NA	NA	False	TTTAAA	-9	NA	21744179	21711484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728576_21728762_21729108_21729270_21731558_21731729_21731817_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135
ES.34569.104	chr9	-	4556	28	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	2107	-350	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.5984409002819	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAATCGGGCTGGACAG	NA	False	NA	NA	False	AATAAA	-23	NA	21742816	21711825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707
ES.34569.105	chr9	-	5202	36	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	3	10646	intron_retention	FALSE	canonical	3	57	junction_13	35.3144937580557	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCAGTCTTCCTGCC	6278	False	NA	NA	False	NA	NA	NA	21763909	21724093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.106	chr9	-	3383	27	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	1	2005	combination_of_known_junctions	FALSE	canonical	3	57	junction_4	38.1600685062588	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCCCTTCCTTTCACCT	6276	False	NA	NA	False	NA	NA	NA	21763911	21732734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.107	chr9	-	4036	25	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	1	2	intron_retention	FALSE	canonical	3	57	junction_2	38.4504551338472	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCTGCTGCTTTTT	6276	False	NA	NA	False	NA	NA	NA	21763911	21734737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.108	chr9	-	4235	4	NNC	ENSMUSG00000032198.10	novel	1508	12	NA	NA	3960	0	intron_retention	FALSE	canonical	1	2	junction_1	54.3588896951445	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	21740963	21734739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21734853_21735692_21735834_21736730_21736827_21737078
ES.34569.109	chr9	-	3222	26	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.9111225568637	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTGCTGCTGCTTT	6271	False	NA	NA	False	NA	NA	NA	21763916	21734739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21734876_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.11	chr9	-	6421	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.4442640935132	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6283	False	NA	NA	False	TTTAAA	-18	NA	21763904	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713019_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727726_21728568_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.110	chr9	-	2144	18	NNC	ENSMUSG00000032198.10	novel	1324	6	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.3361242582762	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTGCTGCTGCTT	6271	False	NA	NA	False	NA	NA	NA	21763916	21734740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21734934_21744372_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757122_21757794_21757971_21758480_21758569_21763840
ES.34569.111	chr9	-	3371	6	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	1460	-1	intron_retention	FALSE	canonical	0	0	junction_3	73.1508031398152	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTGCTGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	21743463	21734740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21735834_21736730_21736827_21740769_21741674_21741758_21742491_21742707_21742940_21743149
ES.34569.112	chr9	-	3186	26	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.3316195048462	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTGCTGCTGCTT	6271	False	NA	NA	False	NA	NA	NA	21763916	21734740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21734853_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.113	chr9	-	3932	24	FSM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-3	-799	-3	-3	multi-exon	FALSE	canonical	3	6	junction_2	42.3368881508629	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACTGGCTGCTGCTGC	6270	False	NA	NA	False	NA	NA	NA	21763917	21734742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21735834_21736730_21736827_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.114	chr9	-	6864	23	NNC	ENSMUSG00000032198.10	novel	1324	6	NA	NA	-37	-1819	intron_retention	FALSE	non_canonical	0	0	junction_1	43.442680959232	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTAATCCATGAACAAGA	6219	False	NA	NA	False	NA	NA	NA	21763968	21737360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21739605_21739685_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.115	chr9	-	7788	21	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	4	-1819	intron_retention	FALSE	canonical	3	152	junction_7	20.1782060649603	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTAATCCATGAACAAGA	6279	False	NA	NA	False	NA	NA	NA	21763908	21737360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.116	chr9	-	7209	1	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	322	-1851	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21744601	21737392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21737400_21744600
ES.34569.117	chr9	-	6836	22	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	15	-1853	intron_retention	FALSE	canonical	2	7	junction_19	42.22426895624	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	6290	False	NA	NA	False	NA	NA	NA	21763897	21737394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757122_21757794_21757971_21758480_21758569_21763840
ES.34569.118	chr9	-	3895	22	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-2	-4812	intron_retention	FALSE	canonical	2	16	junction_9	41.2854671272879	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	6271	False	NA	NA	False	NA	NA	NA	21763916	21740353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750205_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.119	chr9	-	3306	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	3	5401	1	-5401	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTCTCCCATACCTCC	6276	False	NA	NA	False	NA	NA	NA	21763911	21740942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.120	chr9	-	3062	22	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-18	5666	-1	-5666	5prime_fragment	FALSE	canonical	3	152	junction_8	19.8113552266968	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATGTGTACATCTACA	6255	False	NA	NA	False	NA	NA	NA	21763932	21741207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.121	chr9	-	3958	21	NIC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	2	-5670	intron_retention	FALSE	canonical	3	152	junction_7	20.1782060649603	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTTATGTGTACATC	6258	False	NA	NA	False	NA	NA	NA	21763929	21741211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.122	chr9	-	3000	22	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	-2	-5672	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.4522215417857	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTAGTTTATGTGTACA	6271	False	NA	NA	False	NA	NA	NA	21763916	21741213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750960_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.123	chr9	-	4191	21	NNC	ENSMUSG00000032198.10	novel	3130	24	NA	NA	5	-5739	intron_retention	FALSE	canonical	0	0	junction_15	45.2639757423053	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGCACACTAATATGG	6280	False	NA	NA	False	NA	NA	NA	21763907	21741280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21741674_21742328_21742491_21742707_21742940_21743149_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754639_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.124	chr9	-	3072	14	ISM	ENSMUSG00000032198.10	ENSMUST00000217515.2	3130	24	-1	13101	-1	2	5prime_fragment	FALSE	canonical	3	163	junction_1	19.9946738470154	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGCCTCTGTTCTCTTT	6272	False	NA	-4	True	NA	NA	NA	21763915	21748642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.125	chr9	-	1870	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	0	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGCCTCTGTTCTCTTT	6275	False	NA	-4	True	NA	NA	NA	21763912	21748642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.126	chr9	-	1907	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.93955929903	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTGCCTCTGTTCTCTTT	6254	False	NA	-4	True	NA	NA	NA	21763933	21748642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21748864_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.127	chr9	-	1818	15	NNC	ENSMUSG00000032198.10	novel	1868	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	52.93955929903	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATTGCCTCTGTTCTCT	6253	False	NA	-6	True	NA	NA	NA	21763934	21748644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21748776_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.129	chr9	-	2172	14	ISM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	3	892	3	-892	5prime_fragment	FALSE	canonical	3	163	junction_1	19.9946738470154	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGCTCCTACCTTTTTT	6278	False	NA	NA	False	NA	NA	NA	21763909	21749536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.13	chr9	-	3698	26	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	7752	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.0754235703412	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21737171	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728568_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078
ES.34569.130	chr9	-	853	6	FSM	ENSMUSG00000032198.10	ENSMUST00000213775.2	1324	6	1	470	1	-470	multi-exon	FALSE	canonical	3	199	junction_1	8.83176086632785	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGACCTTCATTTA	6276	False	NA	NA	False	NA	NA	NA	21763911	21755396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.131	chr9	-	246	1	Intergenic	novelGene_28121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCACAGAGCCTTCATT	9522	False	NA	NA	False	NA	NA	NA	21760665	21760419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21760400_21760700
ES.34569.14	chr9	-	6173	26	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5267	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.4399041751439	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21739656	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078
ES.34569.16	chr9	-	6158	3	ISM	ENSMUSG00000032198.10	ENSMUST00000217310.2	551	4	-3044	-1545	-3044	0	intron_retention	FALSE	canonical	3	187	junction_2	31	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21718341	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21713165_21713648_21713886_21714109
ES.34569.17	chr9	-	6537	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.0987143955268	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6271	False	NA	NA	False	TTTAAA	-18	NA	21763916	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.18	chr9	-	4433	28	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	2449	0	intron_retention	FALSE	non_canonical	0	0	junction_3	67.3950538130481	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21742474	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712928_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328
ES.34569.19	chr9	-	3184	17	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-56	0	intron_retention	FALSE	non_canonical	0	0	junction_6	59.4227439622238	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21729267	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727736_21728578_21728762_21729108
ES.34569.2	chr9	-	6760	46	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-14	2	intron_retention	FALSE	non_canonical	0	0	junction_5	45.747368540661	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTGCTGACAGTT	6242	False	NA	NA	False	TTTAAA	-20	NA	21763945	21711473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.23	chr9	-	6247	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.7653699585045	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6276	False	NA	NA	False	TTTAAA	-18	NA	21763911	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21733051_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.26	chr9	-	3892	6	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-1578	0	intron_retention	FALSE	canonical	0	0	junction_5	86.0404556008393	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	NA	False	NA	NA	False	TTTAAA	-18	NA	21716875	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21713165_21713648_21713886_21714109_21714200_21714288_21715921_21716014_21716147_21716763
ES.34569.29	chr9	-	4862	33	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	192	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	56.522663803447	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	NA	False	NA	NA	False	TTTAAA	-17	NA	21744731	21711476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714438_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659
ES.34569.3	chr9	-	4887	19	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-3474	2	intron_retention	FALSE	canonical	0	0	junction_4	65.4329597544099	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTGCTGACAGTT	NA	False	NA	NA	False	TTTAAA	-20	NA	21732685	21711473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21713165_21713648_21713886_21714109_21714200_21714284_21714420_21715217_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817
ES.34569.31	chr9	-	6338	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	50.6087750260845	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	6271	False	NA	NA	False	TTTAAA	-17	NA	21763916	21711476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.32	chr9	-	6459	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.3371474496734	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTGGTGTGCTGACA	6266	False	NA	NA	False	TTTAAA	-17	NA	21763921	21711476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712928_21713022_21713165_21713648_21713886_21714109_21714200_21714288_21714432_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.33	chr9	-	6389	46	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-8	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	59.088115827963	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6265	False	NA	NA	False	TTTAAA	-16	NA	21763922	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716089_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.34	chr9	-	6403	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.1016848555574	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6299	False	NA	NA	False	TTTAAA	-16	NA	21763888	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21716002_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725896_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.35	chr9	-	5028	24	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	6695	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	54.5307530167581	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21738228	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078
ES.34569.36	chr9	-	6681	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	49.2498548643424	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6261	False	NA	NA	False	TTTAAA	-16	NA	21763926	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.38	chr9	-	6451	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.3686426014576	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6272	False	NA	NA	False	TTTAAA	-16	NA	21763915	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728568_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.39	chr9	-	3325	22	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-3864	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	64.6371347111973	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21733075	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716089_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030
ES.34569.4	chr9	-	3466	10	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5808	2	intron_retention	FALSE	canonical	3	8	junction_5	66.444258639651	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTGCTGACAGTT	NA	False	NA	NA	False	TTTAAA	-20	NA	21723403	21711473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069
ES.34569.40	chr9	-	6653	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	9	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	58.45297739095	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6284	False	NA	NA	False	TTTAAA	-16	NA	21763903	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21741758_21741899_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.42	chr9	-	6196	23	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	6314	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	48.9687242065098	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21738609	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21713165_21713648_21713886_21714109_21714200_21714288_21714438_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078
ES.34569.43	chr9	-	6584	49	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.8841527466711	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6280	False	NA	NA	False	TTTAAA	-16	NA	21763907	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715217_21715329_21715742_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725896_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731707_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.44	chr9	-	7148	50	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	56.2858400791834	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6269	False	NA	NA	False	TTTAAA	-16	NA	21763918	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744380_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.45	chr9	-	6594	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	63.9661368746516	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6271	False	NA	NA	False	TTTAAA	-16	NA	21763916	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729104_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21741758_21741919_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.48	chr9	-	3814	9	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	5643	-2	intron_retention	FALSE	canonical	0	0	junction_5	86.4449788883079	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21723568	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715919_21716014_21716147_21720816_21720961_21721043_21721237_21723069
ES.34569.49	chr9	-	6502	49	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	53.4694186674859	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6253	False	NA	NA	False	TTTAAA	-16	NA	21763934	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715262_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.5	chr9	-	6455	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	49.6898757122857	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGGTGTGCTGACAGT	6249	False	NA	NA	False	TTTAAA	-19	NA	21763938	21711474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.50	chr9	-	3163	13	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	3328	-2	intron_retention	FALSE	canonical	3	8	junction_6	65.0787450367288	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21725883	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724834_21725764
ES.34569.53	chr9	-	5694	16	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-2516	-2	intron_retention	FALSE	canonical	1	7	junction_5	55.0193501314664	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21731727	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21712925_21713020_21713165_21713648_21713886_21714109_21715921_21716014_21716089_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558
ES.34569.54	chr9	-	6243	47	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	55.617074529375	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6266	False	NA	NA	False	TTTAAA	-16	NA	21763921	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21733051_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.55	chr9	-	3216	10	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	6081	-2	intron_retention	FALSE	canonical	3	172	junction_8	37.4729532092444	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21723130	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069
ES.34569.60	chr9	-	6887	27	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	4812	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	75.1138878892988	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21740111	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736499_21736590_21736730_21739605_21739685
ES.34569.61	chr9	-	5014	23	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-7723	-2	intron_retention	FALSE	canonical	3	8	junction_5	50.5799424526402	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21736934	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730
ES.34569.63	chr9	-	3401	24	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-6590	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	72.1722629460402	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21735801	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714287_21714422_21716014_21716082_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692
ES.34569.64	chr9	-	6401	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	4660	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.6362056879022	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	1055	False	NA	NA	False	TTTAAA	-16	NA	21759252	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725896_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21759201
ES.34569.70	chr9	-	6401	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.8523843163437	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6296	False	NA	NA	False	TTTAAA	-16	NA	21763891	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763837
ES.34569.72	chr9	-	6694	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.8182822238247	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	6258	False	NA	NA	False	TTTAAA	-16	NA	21763929	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741258_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.73	chr9	-	4659	27	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	2432	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	65.3583205045203	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21742491	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712928_21713020_21713161_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21741674_21742328
ES.34569.75	chr9	-	4953	28	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	2046	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	54.8580660195692	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTGGTGTGCTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	21742877	21711477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707
ES.34569.76	chr9	-	4873	24	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-6504	-3	intron_retention	FALSE	canonical	1	8	junction_7	55.624109771768	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGTGTGGTGTGCTGA	NA	False	NA	NA	False	TTTAAA	-15	NA	21735715	21711478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21732923_21733030_21733145_21735692
ES.34569.77	chr9	-	6752	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-20	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	58.9131993025311	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGTGTGGTGTGCTGA	6236	False	NA	NA	False	TTTAAA	-15	NA	21763951	21711478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715415_21715500_21716002_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728568_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.82	chr9	-	6929	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-4	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	60.715519359677	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6269	False	NA	NA	False	TTTAAA	-14	NA	21763918	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21717082_21717289_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757122_21757794_21757971_21758480_21758569_21763840
ES.34569.83	chr9	-	7547	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	69.8477854909962	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6275	False	NA	NA	False	TTTAAA	-14	NA	21763912	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21723663_21724834_21725764_21725896_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743237_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21746260_21746418_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.85	chr9	-	6629	47	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	55.9251119574026	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6275	False	NA	NA	False	TTTAAA	-14	NA	21763912	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728724_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740634_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.89	chr9	-	4970	26	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	6468	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.2594898863551	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	NA	False	NA	NA	False	TTTAAA	-14	NA	21738455	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728576_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078
ES.34569.9	chr9	-	6275	46	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	57.1826011697895	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6241	False	NA	NA	False	TTTAAA	-18	NA	21763946	21711475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735839_21741509_21741671_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.90	chr9	-	6456	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	59.0412844024323	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6273	False	NA	NA	False	TTTAAA	-14	NA	21763914	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714420_21715217_21715271_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731937_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.91	chr9	-	6365	48	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.8672953551802	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6276	False	NA	NA	False	TTTAAA	-14	NA	21763911	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716089_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.34569.95	chr9	-	5279	38	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	-6116	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.4387700640881	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	9268	False	NA	NA	False	TTTAAA	-14	NA	21751039	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733161_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920
ES.34569.96	chr9	-	5901	39	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	-6046	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	50.3986325277266	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	9338	False	NA	NA	False	TTTAAA	-14	NA	21750969	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715217_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920
ES.34569.98	chr9	-	4165	29	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	769	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	60.5722287682993	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	NA	False	NA	NA	False	TTTAAA	-14	NA	21744154	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21716002_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735839_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135
ES.34569.99	chr9	-	6423	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.4734704784494	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCTGTGTGGTGTGCTG	6276	False	NA	NA	False	TTTAAA	-14	NA	21763911	21711479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714422_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744342_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ES.3457.1	chr10	+	6064	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	-183	-23	6	23	multi-exon	TRUE	canonical	3	259	junction_12	27.5850956133924	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTAAGGTCAGAATTGA	NA	False	NA	37	True	AATAAA	-40	NA	83379621	83432360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.10	chr10	+	5707	32	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	12	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_24	62.4064919646508	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTCAAAACTGTCCTT	NA	False	NA	10	True	AATAAA	-13	NA	83379816	83432333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.11	chr10	+	5559	35	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	79.0792165575095	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAAAACTGTCCTTC	NA	False	NA	11	True	AATAAA	-14	NA	83379816	83432334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83430105_83430185_83431742_83431944
ES.3457.13	chr10	+	5624	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	78.9443551049629	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379817	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431733_83431936
ES.3457.15	chr10	+	5485	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	81.5164800726669	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83379817	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.16	chr10	+	5448	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	13	397	13	-397	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCACTGTAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	83379817	83431940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.17	chr10	+	7290	32	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	8	intron_retention	FALSE	non_canonical	0	0	junction_9	62.676033056241	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	22	True	AATAAA	-25	NA	83379817	83432345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392665_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.18	chr10	+	5929	32	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	-11	intron_retention	FALSE	canonical	3	23	junction_7	59.1652652831454	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379817	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.2	chr10	+	5678	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	-10	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379794	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.20	chr10	+	5554	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGTTATCTCACTTG	NA	False	NA	-74	True	ATTAAA	-16	NA	83379817	83432249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.21	chr10	+	5316	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	-326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAATGGTATTAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	83379817	83432011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.22	chr10	+	5362	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	13	-295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	80.4589224398615	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCAGTATGTTCACACC	NA	False	NA	NA	False	ATTAAA	-15	NA	83379817	83432042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390696_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.23	chr10	+	8565	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	116.867642714664	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAAACTGTCCTTCCA	NA	False	NA	13	True	AATAAA	-16	NA	83379818	83432336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396401_83396790_83396989_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83417566_83417609_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430031_83431742_83431944
ES.3457.24	chr10	+	5654	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	78.1834155345394	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379818	83432337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431733_83431934
ES.3457.25	chr10	+	5664	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	16	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	80.2418634970794	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83379820	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411859_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.26	chr10	+	5666	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	80.7165226257511	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379821	83432337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386716_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.27	chr10	+	5394	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	95.0126278398604	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379823	83432337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83430105_83430185_83431742_83431944
ES.3457.28	chr10	+	5625	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	94.0651064996459	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAAAACTGTCCTTC	NA	False	NA	11	True	AATAAA	-14	NA	83379823	83432334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421683_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.29	chr10	+	5437	33	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	22	-411	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	58.2823056204668	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAATGT	NA	False	NA	NA	False	NA	NA	NA	83379826	83431926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.3	chr10	+	4695	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	6	-105	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	59.8179203395605	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTTGTTTTTTATTG	NA	False	NA	NA	False	AATATA	-18	NA	83379810	83431193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385475_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.30	chr10	+	5825	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	61.8397547976825	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAAAACTGTCCTTCC	NA	False	NA	12	True	AATAAA	-15	NA	83379827	83432335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416218_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.31	chr10	+	5744	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	24	90	24	-90	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTGTTATCTCACT	NA	False	NA	-76	True	ATTAAA	-14	NA	83379828	83432247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.32	chr10	+	5544	34	NNC	ENSMUSG00000034560.7	novel	5014	33	NA	NA	27	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	92.1352860062657	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTGTTATCTCACT	NA	False	NA	-76	True	ATTAAA	-14	NA	83379831	83432247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.33	chr10	+	5619	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	27	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	93.1097282114136	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATAAATATAATTTCAA	NA	False	NA	0	True	AATAAA	-3	NA	83379831	83432323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427657_83430045_83431742_83431944
ES.3457.34	chr10	+	5213	35	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	29	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	79.0792165575095	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATTTAAATGGTATT	NA	False	NA	NA	False	AATAAA	-13	NA	83379833	83432005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83430105_83430185_83431742_83431944
ES.3457.35	chr10	+	7057	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	34	-11	intron_retention	FALSE	non_canonical	0	0	junction_32	79.3898608135825	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379838	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431738_83431941
ES.3457.36	chr10	+	5849	33	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	34	13	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	58.2823056204668	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379838	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.38	chr10	+	6969	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	34	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.3982625709417	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83379838	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83395442_83395517_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.39	chr10	+	8349	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	34	13	intron_retention	FALSE	non_canonical	0	0	junction_24	81.7947125430489	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379838	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83417569_83417611_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.4	chr10	+	5568	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	6	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	93.3415580791668	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	22	True	AATAAA	-25	NA	83379810	83432345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424068_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.43	chr10	+	7336	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	95.4477438654214	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83379839	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417227_83417566_83417609_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.46	chr10	+	5810	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.6922807164721	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTGTCCTTCCATTG	NA	False	NA	16	True	AATAAA	-19	NA	83379839	83432339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390666_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.47	chr10	+	5549	35	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	91.8675564270403	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAAAACTGTCCTTCC	NA	False	NA	12	True	AATAAA	-15	NA	83379839	83432335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83430105_83430185_83431742_83431944
ES.3457.48	chr10	+	5392	31	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	80.760854103678	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCCATTGGATGCTT	NA	False	NA	23	True	AATAAA	-26	NA	83379839	83432346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385475_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424068_83427584_83427653_83430034
ES.3457.49	chr10	+	5825	33	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	8	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	59.380057350406	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	22	True	AATAAA	-25	NA	83379839	83432345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.5	chr10	+	5650	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAAACTGTCCTTCCA	NA	False	NA	13	True	AATAAA	-16	NA	83379811	83432336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431755_83431954
ES.3457.50	chr10	+	5730	35	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	35	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	94.2678076024525	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCATTGGATGCTTAA	NA	False	NA	25	True	AATAAA	-28	NA	83379839	83432348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83416677_83416777_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.51	chr10	+	5933	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	36	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.0062440171163	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTCAAAACTGTCCTT	NA	False	NA	10	True	AATAAA	-13	NA	83379840	83432333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83381971_83382087_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.52	chr10	+	5613	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	78.9443551049629	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAAAACTGTCCTTC	NA	False	NA	11	True	AATAAA	-14	NA	83379840	83432334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431755_83431954
ES.3457.53	chr10	+	5531	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	38	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	81.9507998359381	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379842	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.54	chr10	+	5632	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	78.1834155345394	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83379843	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.55	chr10	+	5507	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	39	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	78.9445877428231	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGACAGCAAGTTTGT	NA	False	NA	-85	True	ATTAAA	-5	NA	83379843	83432238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430037_83431755_83431964
ES.3457.6	chr10	+	5660	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	7	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379811	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431733_83431936
ES.3457.60	chr10	+	5913	32	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	44	16	intron_retention	FALSE	canonical	3	259	junction_11	28.0130785569765	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGGATGCTTAAGGTCA	NA	False	NA	30	True	AATAAA	-33	NA	83379848	83432353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.64	chr10	+	6210	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	46	-97	intron_retention	FALSE	non_canonical	0	0	junction_32	79.347903839673	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCAAGTTTGTTA	NA	False	NA	-83	True	ATTAAA	-7	NA	83379850	83432240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391864_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.65	chr10	+	5816	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	46	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.6922807164721	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379850	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390696_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.67	chr10	+	5411	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	47	-197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	60.9430630422038	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTTTTGTTGTAAA	NA	False	NA	NA	False	TTTAAA	-7	NA	83379851	83432140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.68	chr10	+	5417	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	47	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	80.3582657376325	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTGTTATCTCACT	NA	False	NA	-76	True	ATTAAA	-14	NA	83379851	83432247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424068_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.7	chr10	+	6054	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	10	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	80.0257649052385	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	False	NA	22	True	AATAAA	-25	NA	83379814	83432345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83396790_83396989_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.70	chr10	+	3971	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	47	1840	47	-801	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGCCTGAAAGTCATGA	NA	False	NA	NA	False	AGTAAA	-18	NA	83379851	83430497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.71	chr10	+	5719	30	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	47	1	intron_retention	FALSE	canonical	0	0	junction_24	64.448524934483	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAACTGTCCTTCCATT	NA	False	NA	15	True	AATAAA	-18	NA	83379851	83432338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83379967_83382648_83382789_83385325_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.77	chr10	+	5734	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	56	13	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_33	60.3300381122256	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83379860	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83430105_83430185
ES.3457.78	chr10	+	6117	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	63	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	80.6992284530089	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAAAACTGTCCTTCC	NA	False	NA	12	True	AATAAA	-15	NA	83379867	83432335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83397124_83397449_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.79	chr10	+	7016	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	64	-11	intron_retention	FALSE	non_canonical	0	0	junction_32	61.8397547976825	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379868	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.8	chr10	+	5426	31	NNC	ENSMUSG00000034560.7	novel	5014	33	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	110.651309175365	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAAAACTGTCCTTCC	NA	False	NA	12	True	AATAAA	-15	NA	83379815	83432335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385562_83390582_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431733_83431936
ES.3457.81	chr10	+	5466	33	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	68	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	81.5668581211144	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTGGATGCTTAAGGT	NA	False	NA	28	True	AATAAA	-31	NA	83379872	83432351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.82	chr10	+	5306	33	NNC	ENSMUSG00000034560.7	novel	636	7	NA	NA	3050	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	68.6107681053055	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTTGTTATCTCACTT	NA	False	NA	-75	True	ATTAAA	-15	NA	83382854	83432248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83382894_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431755_83431954
ES.3457.83	chr10	+	5799	24	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	12902	-747	12902	747	3prime_fragment	FALSE	canonical	3	259	junction_3	28.7519211160558	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAGGTGTGGGCTTA	NA	False	NA	NA	False	NA	NA	NA	83392706	83433084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.84	chr10	+	5163	21	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	16390	13	intron_retention	FALSE	non_canonical	0	0	junction_20	71.630649864426	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATTGGATGCTTAAGG	NA	False	NA	27	True	AATAAA	-30	NA	83396194	83432350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.85	chr10	+	4725	21	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	16423	-4	16423	4	3prime_fragment	FALSE	canonical	3	286	junction_6	27.4034669339483	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83396227	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.87	chr10	+	3987	15	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	-7110	4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	85.2351189956586	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCCTTCCATTGGA	NA	False	NA	18	True	AATAAA	-21	NA	83408221	83432341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.89	chr10	+	5402	10	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	1048	-97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.974884936275	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCAAGTTTGTTA	NA	False	NA	-83	True	ATTAAA	-7	NA	83416379	83432240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83417566_83417609_83419228_83421681_83421749_83422497_83422585_83424020_83424068_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.9	chr10	+	5619	34	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	12	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	79.1675467545687	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83379816	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385475_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431742_83431944
ES.3457.91	chr10	+	4638	8	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	-2926	-90	intron_retention	FALSE	non_canonical	0	0	junction_7	121.942274734183	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTTGTTATCTCACT	NA	False	NA	-76	True	ATTAAA	-14	NA	83418730	83432247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83419228_83421681_83421749_83422497_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431733_83431936
ES.3457.92	chr10	+	3181	9	NNC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	-2805	11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	114.085494257596	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCATTGGATGCTTAA	NA	False	NA	25	True	AATAAA	-28	NA	83418851	83432348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431744_83431948
ES.3457.93	chr10	+	3667	7	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	41198	11	-654	-11	3prime_fragment	FALSE	canonical	3	289	junction_3	37.1232930771085	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83421002	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.94	chr10	+	2603	7	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	41876	397	24	-397	3prime_fragment	FALSE	canonical	3	289	junction_3	37.1232930771085	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCACTGTAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	83421680	83431940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ES.3457.95	chr10	+	2590	3	ISM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	47045	11	5193	-11	3prime_fragment	FALSE	canonical	3	321	junction_1	13	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAATTTCAAAAC	NA	False	NA	3	True	AATAAA	-6	NA	83426849	83432326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_83427048_83427552_83427653_83430034
ES.34570.1	chr9	-	349	2	Intergenic	novelGene_28122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGTGATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	21771101	21770383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21770576_21770944
ES.34571.1	chr9	-	329	1	Intergenic	novelGene_28123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7973	False	NA	NA	False	NA	NA	NA	21787095	21786766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21786800_21787100
ES.34571.2	chr9	-	217	1	Intergenic	novelGene_28124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGTACTGGGGAG	7973	False	NA	NA	False	NA	NA	NA	21787095	21786878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21786900_21787100
ES.34572.1	chr9	-	181	1	Intergenic	novelGene_28125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGATGTTTCCCC	7904	False	NA	NA	False	NA	NA	NA	21802020	21801839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21801800_21802000
ES.34573.1	chr9	-	201	1	Intergenic	novelGene_28126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATGGGTGTTTTGCC	5595	False	NA	NA	False	NA	NA	NA	21804329	21804128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21804100_21804300
ES.34574.1	chr9	-	4067	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	44	-276	-9	276	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGAATGGGTTTATTT	2277	False	NA	NA	False	NA	NA	NA	21829444	21818510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ES.34574.10	chr9	-	873	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	-87	-1	7	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCATGGTCATTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	21838845	21832303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ES.34574.12	chr9	-	1899	2	FSM	ENSMUSG00000040883.19	ENSMUST00000217263.2	671	2	-1230	2	7	0	multi-exon	FALSE	canonical	3	239	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	21838845	21832305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21832646_21837286
ES.34574.13	chr9	-	643	4	NNC	ENSMUSG00000040883.19	novel	862	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	108.533660933167	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	21838854	21832305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21832646_21837286_21837451_21837544_21837654_21838824
ES.34574.14	chr9	-	724	4	NNC	ENSMUSG00000040883.19	novel	862	4	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.946451612693	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	21838692	21832305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21832646_21837286_21837451_21837544_21837654_21838581
ES.34574.15	chr9	-	1782	3	ISM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	8	1	8	-1	intron_retention	FALSE	canonical	3	227	junction_2	6	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGCCATGGTCATTTT	NA	False	NA	-8	True	AATAAA	-11	NA	21838823	21832306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21832646_21837286_21837451_21837544
ES.34574.3	chr9	-	3791	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	42	2	-11	-2	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTGTATATTGCTTAAT	2275	False	NA	NA	False	AATAAA	-23	NA	21829446	21818788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ES.34574.4	chr9	-	3874	6	NNC	ENSMUSG00000019066.14	novel	3835	5	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.5045448286222	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGCATTGTATATTG	2275	False	NA	NA	False	AATAAA	-17	NA	21829446	21818794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21821968_21825940_21826066_21826158_21826278_21826618_21826708_21827000_21827240_21829317
ES.34574.5	chr9	-	4495	4	NIC	ENSMUSG00000019066.14	novel	3835	5	NA	NA	-1	8	intron_retention	FALSE	canonical	3	21	junction_3	8.5764535535124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCTGTGCATTGTATA	2285	False	NA	NA	False	AATAAA	-14	NA	21829436	21818797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21821968_21825940_21826066_21826158_21827240_21829317
ES.34574.6	chr9	-	3096	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	42	697	-11	454	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCTACTGTGGAAACTG	2275	False	NA	NA	False	NA	NA	NA	21829446	21819483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ES.34574.7	chr9	-	2260	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	42	1533	-11	-382	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTATGTTCTTAAGATT	2275	False	NA	-6	True	ATTAAA	-15	NA	21829446	21820319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ES.34574.8	chr9	-	2594	7	Fusion	ENSMUSG00000019066.14_ENSMUSG00000040883.19	novel	3835	5	NA	NA	-3	-439	multi-exon	FALSE	canonical	0	0	junction_4	79.8679465673739	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAAAGACTCAATTTTT	NA	False	NA	-63	True	NA	NA	NA	21838834	21820376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21837286_21837451_21837544_21837654_21838587
ES.34574.9	chr9	-	779	4	NNC	ENSMUSG00000040883.19	novel	862	4	NA	NA	15	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	109.946451612693	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGTCATTTTTTTCAC	NA	False	NA	-2	True	AATAAA	-17	NA	21838816	21832300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21832646_21837286_21837451_21837544_21837654_21838655
ES.34575.1	chr9	+	4805	21	Fusion	ENSMUSG00000006241.17_ENSMUSG00000040563.14	novel	1519	13	NA	NA	1	352	intron_retention	TRUE	canonical	0	0	junction_1	11.2712022428843	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAGTGGGTGGGAATG	3268	False	NA	NA	False	NA	NA	NA	21838908	21859665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_21839039_21840388_21840523_21840603_21840831_21842605_21842640_21842994_21843084_21843160_21843243_21844099_21844287_21844841_21844910_21844991_21845069_21845413_21845530_21845730_21845814_21846825_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
ES.34575.2	chr9	+	1510	5	NNC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-15	-6073	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	8.8423695919137	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGTGGTTTGTCACATT	82	False	NA	NA	False	NA	NA	NA	21848313	21853240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851993_21852170_21852297
ES.34575.3	chr9	+	2628	10	NNC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	10.3923048454133	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTTCTGCCTGC	83	False	NA	NA	False	AATAAA	-17	NA	21848314	21860201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851993_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ES.34575.4	chr9	+	2622	10	NIC	ENSMUSG00000040563.14	novel	2626	10	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	8.37692303332034	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTTCTGCCTGC	86	False	NA	NA	False	AATAAA	-17	NA	21848317	21860201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
ES.34575.5	chr9	+	2638	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	-11	-1	-11	1	multi-exon	FALSE	canonical	3	9	junction_8	8.89999306422257	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGGCCTTCTGCCTGC	86	False	NA	NA	False	AATAAA	-17	NA	21848317	21860201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ES.34575.6	chr9	+	2481	9	FSM	ENSMUSG00000040563.14	ENSMUST00000190387.7	2608	9	120	7	-59	-4	multi-exon	FALSE	canonical	3	12	junction_7	8.88467782195843	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGTTTGGCCTTCTG	1458	False	NA	NA	False	AATAAA	-12	NA	21849689	21860196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
ES.34576.1	chr9	+	185	1	Intergenic	novelGene_28127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTGTCATCCAG	NA	False	NA	NA	False	NA	NA	NA	21865778	21865963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21865800_21866000
ES.34577.1	chr9	+	1843	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	-4	-1	-4	1	multi-exon	FALSE	canonical	3	72	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGACTCTGGTGGTCTGT	NA	False	NA	9	True	NA	NA	NA	21867046	21869561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21867301_21867972
ES.34577.3	chr9	+	1644	2	Genic_Genomic	ENSMUSG00000051238.7	novel	1838	2	NA	NA	420	1	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGACTCTGGTGGTCTGT	NA	False	NA	9	True	NA	NA	NA	21867470	21869561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_21867529_21867975
ES.34578.1	chr9	-	1953	5	NIC	ENSMUSG00000006235.7	novel	1761	8	NA	NA	13	-1	intron_retention	FALSE	canonical	3	6	junction_3	3.49106001094224	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTCTTATTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	21873847	21870193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21871145_21871819_21872140_21872743_21872902_21872986_21873163_21873499
ES.34578.2	chr9	-	1883	6	NIC	ENSMUSG00000006235.7	novel	1761	8	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	6	junction_3	3.55527776692624	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTGTCTTATTTGTG	NA	False	NA	NA	False	NA	NA	NA	21873863	21870196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21870967_21871056_21871145_21871819_21871908_21871985_21872140_21872743_21873163_21873499
ES.34578.3	chr9	-	1280	6	NNC	ENSMUSG00000006235.7	novel	1761	8	NA	NA	30	-7	intron_retention	FALSE	canonical	0	0	junction_1	5.31413210223457	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTTGTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	21873830	21870199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21870407_21871056_21871145_21871819_21872140_21872743_21872902_21872986_21873163_21873499
ES.34579.1	chr9	-	175	1	Intergenic	novelGene_28128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21876014	21875839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21875800_21876000
ES.3458.1	chr10	-	3874	33	Antisense	novelGene_ENSMUSG00000034560.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGCACGTGACTTCCGGC	NA	False	NA	NA	False	NA	NA	NA	83430380	83379833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_83379967_83382648_83382791_83385327_83385372_83385454_83385527_83386125_83386172_83386742_83386810_83390594_83390681_83391436_83391478_83391874_83391978_83392663_83392786_83394459_83394585_83394680_83394808_83396227_83396391_83400274_83400400_83405829_83405956_83407214_83407322_83407953_83408103_83408220_83408301_83409638_83409745_83410303_83410422_83411878_83412048_83412536_83412692_83415343_83415418_83416117_83416226_83417120_83417254_83419116_83419227_83421680_83421745_83422493_83422583_83424018_83424169_83426154_83426251_83426849_83427046_83427550_83427651_83430032
ES.3458.2	chr10	-	3761	33	Antisense	novelGene_ENSMUSG00000034560.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCCGCTGTCACGGCA	NA	False	NA	NA	False	NA	NA	NA	83430380	83379846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_83379967_83382648_83382791_83385327_83385372_83385454_83385527_83386125_83386172_83386742_83386810_83390594_83390682_83391439_83391478_83391874_83391978_83392663_83392786_83394459_83394585_83394680_83394808_83396227_83396391_83400274_83400400_83405829_83405956_83407214_83407322_83407953_83408101_83408216_83408301_83409638_83409745_83410303_83410422_83411878_83412048_83412536_83412692_83415343_83415423_83416121_83416226_83417120_83417254_83419116_83419227_83421680_83421745_83422493_83422583_83424018_83424066_83426152_83426251_83426849_83427046_83427550_83427651_83430032
ES.34580.1	chr9	+	190	1	Intergenic	novelGene_28129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTGCATCCCTG	NA	False	NA	NA	False	NA	NA	NA	21876596	21876786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21876600_21876800
ES.34581.1	chr9	-	1632	12	NIC	ENSMUSG00000040146.10	novel	2543	19	NA	NA	-4160	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.21937374831522	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCGGTCACATCCTAAC	NA	False	NA	NA	False	NA	NA	NA	21892877	21882824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21883306_21885317_21885433_21886903_21887004_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585
ES.34582.1	chr9	-	2163	13	FSM	ENSMUSG00000039632.14	ENSMUST00000044926.6	2197	13	27	7	27	-7	multi-exon	FALSE	canonical	1	2	junction_6	2.13924960883224	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCCCCTGGGTATTCA	4231	False	NA	NA	False	AATAAA	-9	NA	21913903	21901173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21901541_21901692_21901778_21902097_21902254_21902903_21903061_21903143_21903305_21904167_21904321_21904833_21904957_21906108_21906235_21906322_21906425_21906503_21906675_21909181_21909260_21909340_21909463_21913541
ES.34583.1	chr9	+	2352	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	-344	-25	-84	23	multi-exon	TRUE	canonical	3	290	junction_11	154.653737577573	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCTGTTGGTTTCAC	NA	False	NA	43	True	AATAAA	-39	NA	21914017	21925541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.12	chr9	+	2781	17	ISM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-23	-1	-23	1	intron_retention	FALSE	canonical	3	461	junction_11	119.879040599264	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914290	21925519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311
ES.34583.13	chr9	+	2659	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-23	17	intron_retention	FALSE	canonical	0	0	junction_6	284.81577849842	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCATTTTTTCTGTTGG	NA	False	NA	37	True	AATAAA	-33	NA	21914290	21925535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21918782_21918826_21919539_21919670_21921452_21921538_21921819_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.15	chr9	+	3437	13	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_9	250.47532590834	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914290	21925518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922473_21922550_21922733_21922893_21922969_21923067_21923329
ES.34583.16	chr9	+	2590	17	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	461	junction_10	128.781792191288	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914296	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.2	chr9	+	2063	18	NNC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	-34	23	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	220.005284617246	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCTGTTGGTTTCAC	NA	False	NA	43	True	AATAAA	-39	NA	21914067	21925541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914167_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.20	chr9	+	3959	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_4	358.373488268072	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914306	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915883_21915986_21917954_21919539_21919670_21920338_21920501_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922972_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.21	chr9	+	3973	15	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-7	1	intron_retention	FALSE	canonical	3	461	junction_10	121.989879138578	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914306	21925519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924463_21925207
ES.34583.22	chr9	+	2494	16	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	0	-1	intron_retention	FALSE	canonical	3	461	junction_11	132.565187318877	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914313	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.23	chr9	+	1771	15	NNC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	288.393261830764	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914313	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919677_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.24	chr9	+	1931	17	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	277.318909098803	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCTGTTGGTTTCAC	NA	False	NA	43	True	AATAAA	-39	NA	21914314	21925541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915887_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924311_21924463_21925207
ES.34583.25	chr9	+	2034	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	217.300423488872	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914314	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925183
ES.34583.27	chr9	+	2194	17	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	1	intron_retention	FALSE	canonical	3	461	junction_10	128.780199734858	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914314	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.28	chr9	+	2008	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	224.225788330087	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTTTTTAATTTC	NA	False	NA	23	True	AATAAA	-19	NA	21914314	21925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923980_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.29	chr9	+	2053	18	NNC	ENSMUSG00000003402.15	novel	1983	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	233.142278017755	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914314	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925183
ES.34583.3	chr9	+	2257	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	-222	-23	-10	23	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTCTGTTGGTTTCAC	NA	False	NA	43	True	AATAAA	-39	NA	21914091	21925541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.30	chr9	+	3208	14	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	-1	intron_retention	FALSE	canonical	3	461	junction_9	136.196038660255	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914314	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21922872_21922969_21923067_21923329_21923400_21923514_21924232_21924311_21924463_21925207
ES.34583.31	chr9	+	1962	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	224.68723359634	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTGTGTGGCTGTTTT	NA	False	NA	15	True	AATAAA	-11	NA	21914314	21925513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922554_21922781_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.33	chr9	+	1999	18	NNC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.406095076008	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914314	21925519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914351_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.34	chr9	+	2088	17	NIC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	3	1	intron_retention	FALSE	canonical	3	461	junction_11	121.146331326004	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914316	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924463_21925207
ES.34583.35	chr9	+	2250	16	NIC	ENSMUSG00000003402.15	novel	1983	18	NA	NA	3	-1	intron_retention	FALSE	canonical	2	11	junction_8	249.9209119346	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914316	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.38	chr9	+	1991	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	279.141280844092	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21914322	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919541_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922865_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.39	chr9	+	3537	14	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	12	1	intron_retention	FALSE	canonical	3	150	junction_1	209.710592351409	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914325	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914389_21914694_21914834_21914972_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924232_21924311_21924463_21925207
ES.34583.4	chr9	+	2535	16	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	-9	1	intron_retention	FALSE	canonical	3	150	junction_1	202.989282694651	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914092	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922872_21922969_21923067_21923329_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.40	chr9	+	2018	18	NNC	ENSMUSG00000003402.15	novel	1983	18	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	239.605543777678	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914325	21925519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923391_21923509_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.41	chr9	+	6636	12	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	12	1	intron_retention	FALSE	canonical	3	150	junction_1	258.916272883024	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTGTTTTTTAATT	NA	False	NA	21	True	AATAAA	-17	NA	21914325	21925519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21919670_21921452_21921538_21921819_21922893_21922969_21923067_21923329_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.42	chr9	+	2177	17	ISM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	122	-6	-29	4	3prime_fragment	FALSE	canonical	3	290	junction_10	150.627943435971	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTTTTTTAATTTCA	NA	False	NA	24	True	AATAAA	-20	NA	21914483	21925522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.43	chr9	+	2117	17	ISM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	212	-7	13	7	3prime_fragment	FALSE	canonical	3	461	junction_10	116.635047798678	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTTAATTTCATTT	NA	False	NA	27	True	AATAAA	-23	NA	21914525	21925525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.44	chr9	+	1888	16	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	131	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	222.578785052744	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTGTGGCTGTTTTT	NA	False	NA	16	True	AATAAA	-12	NA	21914643	21925514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924311_21924463_21925207
ES.34583.47	chr9	+	1683	15	ISM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	1479	3	-1071	-1	3prime_fragment	FALSE	canonical	3	461	junction_8	123.158931665469	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21915792	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.48	chr9	+	1706	15	ISM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	1431	-1	-1071	1	3prime_fragment	FALSE	canonical	3	290	junction_8	159.3278771872	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21915792	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.49	chr9	+	1606	14	ISM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	1624	3	-878	-3	3prime_fragment	FALSE	canonical	3	290	junction_7	164.654201031009	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTGTGTGGCTGTTTT	NA	False	NA	15	True	AATAAA	-11	NA	21915985	21925513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.5	chr9	+	2072	19	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	217.690033343936	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914093	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914167_21914325_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.50	chr9	+	3730	8	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	1501	-1	intron_retention	FALSE	canonical	3	461	junction_2	168.617911266864	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21918364	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21919670_21921452_21922872_21922969_21923067_21923329_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.51	chr9	+	3267	6	NIC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	2775	-1	intron_retention	FALSE	canonical	3	461	junction_4	127.050541124389	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21919638	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21919670_21921452_21921538_21921819_21922550_21922733_21922872_21922969_21923067_21923329
ES.34583.52	chr9	+	1303	11	ISM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	7089	1	4587	-1	3prime_fragment	FALSE	canonical	3	290	junction_4	184.335807698884	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	False	NA	17	True	AATAAA	-13	NA	21921450	21925515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.53	chr9	+	990	7	ISM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	8563	-3	6013	3	3prime_fragment	FALSE	canonical	3	812	junction_3	71.2540447195027	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTTTTTAATTTC	NA	False	NA	23	True	AATAAA	-19	NA	21922876	21925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.7	chr9	+	2185	18	NNC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.812967875546	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCTGTTTTTTAA	NA	False	NA	19	True	AATAAA	-15	NA	21914105	21925517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914351_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ES.34583.8	chr9	+	5358	9	NNC	ENSMUSG00000003402.15	novel	2228	18	NA	NA	32	3	intron_retention	FALSE	canonical	1	4	junction_1	279.076574393122	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGTTTTTTAATTTC	NA	False	NA	23	True	AATAAA	-19	NA	21914133	21925521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_21914167_21914694_21914834_21914972_21915090_21915793_21917954_21919539_21919670_21921452_21921538_21921819_21923067_21923329_21924463_21925207
ES.34584.1	chr9	-	4539	6	ISM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	15202	2	-10434	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	1.95959179422654	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCAGGTGCTCTGTGT	NA	False	NA	-2	True	AATAAA	-15	NA	21948104	21926302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21930151_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936
ES.34584.2	chr9	-	1381	1	ISM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	34465	1160	8829	296	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACAAAGACGATTTAAAAA	NA	False	NA	NA	False	AATATA	-32	NA	21928841	21927460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21927500_21928800
ES.34585.1	chr9	-	618	1	Intergenic	novelGene_28130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATGAA	-43	NA	21951654	21951036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_21951000_21951700
ES.34586.1	chr9	+	3835	1	Antisense	novelGene_ENSMUSG00000038895.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	21967983	21971818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_21968000_21971800
ES.34587.1	chr9	+	601	1	NIC	ENSMUSG00000096981.3	novel	567	4	NA	NA	4	-13544	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAAATGGCTCACTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	21982331	21982932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_21982300_21982900
ES.34588.1	chr9	+	176	1	Intergenic	novelGene_28131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21987028	21987204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_21987000_21987200
ES.34589.1	chr9	+	1364	2	ISM	ENSMUSG00000096981.3	ENSMUST00000180419.2	1415	3	5140	-4	5140	4	3prime_fragment	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATCTATGTGAAATGG	NA	False	NA	8	True	AATAAA	-16	NA	21987467	21997422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_21987648_21996238
ES.3459.1	chr10	-	3071	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	-51	0	-51	0	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484653	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.10	chr10	-	4262	19	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_13	26.4586796419448	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484551	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457450_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.12	chr10	-	3129	22	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	32.7886103780191	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484565	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83463188_83463335_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.14	chr10	-	3970	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	19	junction_1	22.0868344234217	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTATTGTGGTTAGT	NA	False	NA	-2	True	AATAAA	-16	NA	83484549	83435898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.15	chr10	-	2806	21	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	30.7735275845978	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83484590	83435899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460586_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.17	chr10	-	2921	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-24	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	25.4059560709318	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83484563	83435899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.18	chr10	-	4192	19	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_12	32.1124567192112	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83484528	83435899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83448765_83450007_83450167_83453210_83453294_83456561_83456703_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.19	chr10	-	2020	12	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-2309	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.912833997955	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83450054	83435899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436906_83437746_83437795_83438621_83438739_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007
ES.3459.2	chr10	-	2840	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484636	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.22	chr10	-	2835	22	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	24.4896201807754	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTTATTGTGGTTAG	NA	False	NA	-3	True	AATAAA	-15	NA	83484578	83435899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436692_83436849_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.26	chr10	-	1353	12	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	27002	5612	6566	0	internal_fragment	FALSE	canonical	3	87	junction_6	12.6366906432508	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTGGGTTGGGTGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	83457600	83441508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575
ES.3459.27	chr10	-	177	1	Intergenic	novelGene_2663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83442581	83442404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_83442400_83442600
ES.3459.28	chr10	-	1545	10	ISM	ENSMUSG00000020263.15	ENSMUST00000147582.8	3377	14	-15	7921	-10	693	5prime_fragment	FALSE	canonical	3	97	junction_4	6.21825270205921	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACACATAGTGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	83484549	83449429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.4	chr10	-	7309	16	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	7	0	intron_retention	FALSE	canonical	3	74	junction_1	12.4924866308603	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484522	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83441799_83444563_83444617_83444800_83444960_83446841_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.5	chr10	-	4352	20	NNC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	9	0	intron_retention	FALSE	canonical	1	1	junction_10	26.3039973579741	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484520	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83449812_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.6	chr10	-	4333	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_16	33.5665011581487	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484550	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83463188_83463335_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.7	chr10	-	2983	19	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_15	25.9684043539713	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484577	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.8	chr10	-	3044	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	-18	0	intron_retention	FALSE	canonical	1	2	junction_11	25.3679842722827	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484557	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83447064_83447313_83447357_83448575_83448765_83450007_83450160_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.3459.9	chr10	-	4541	18	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	24	0	intron_retention	FALSE	canonical	3	74	junction_1	12.1629649453978	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484578	83435896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ES.34590.1	chr9	-	3597	17	Fusion	ENSMUSG00000038895.17_ENSMUSG00000066839.13	novel	1888	9	NA	NA	19	1	multi-exon	TRUE	canonical	1	2	junction_9	93.1805832443112	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGCCTGGATAATTGTG	5940	False	NA	0	True	ATTAAA	-23	NA	21996679	21966754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968999_21969099_21969712_21976996_21977213_21979443_21979488_21982344_21982820_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ES.34590.10	chr9	-	2974	3	ISM	ENSMUSG00000038895.17	ENSMUST00000216916.2	2534	7	11979	56	11979	-7	intron_retention	FALSE	canonical	3	51	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCCCTAAGCCTGGA	NA	False	NA	-8	True	ATTAAA	-15	NA	21970593	21966762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21967190_21967288_21967825_21968582
ES.34590.11	chr9	-	2314	4	ISM	ENSMUSG00000038895.17	ENSMUST00000216916.2	2534	7	12537	56	12537	-7	3prime_fragment	FALSE	canonical	3	51	junction_1	5.18544972870135	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCCCTAAGCCTGGA	NA	False	NA	-8	True	ATTAAA	-15	NA	21970035	21966762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_21967190_21967288_21967825_21968582_21968695_21968796
ES.34590.12	chr9	-	3437	4	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	10967	-18	intron_retention	FALSE	canonical	3	10	junction_2	22.3755819291179	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGAGTTGCCCTTCCC	NA	False	NA	-19	True	ATTAAA	-4	NA	21971605	21966773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21967190_21967288_21967389_21968582_21968695_21968796
ES.34590.13	chr9	-	1965	8	NNC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	2951	-18	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	17.4355957741627	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGAGTTGCCCTTCCC	9820	False	NA	-19	True	ATTAAA	-4	NA	21979621	21966773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969013_21969099_21969712_21976996_21977213_21979443
ES.34590.14	chr9	-	2062	6	NIC	ENSMUSG00000038895.17	novel	1888	9	NA	NA	159	-780	intron_retention	FALSE	canonical	3	19	junction_2	14.0427917452336	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGCTGTGGCAAGAAG	9685	False	NA	NA	False	NA	NA	NA	21982413	21967775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21968695_21968796_21968999_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ES.34590.15	chr9	-	1960	1	Genic_Genomic	ENSMUSG00000038895.17	novel	NA	NA	NA	NA	5935	15	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAGAATGTCAGAACC	NA	False	NA	NA	False	NA	NA	NA	21976637	21974677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_21974700_21976600
ES.34590.16	chr9	-	1883	7	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	12	7	intron_retention	FALSE	canonical	3	16	junction_6	81.5449773642334	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGGCTTCCCTTCGT	5908	False	NA	-2	True	AATAAA	-22	NA	21996711	21983534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
ES.34590.17	chr9	-	1478	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	80.1136947196461	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGCCCTGTGGCTTCC	5898	False	NA	-8	True	AATAAA	-16	NA	21996721	21983540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996652
ES.34590.18	chr9	-	1676	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5885	False	NA	-9	True	AATAAA	-15	NA	21996734	21983541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ES.34590.19	chr9	-	4300	5	NIC	ENSMUSG00000066839.13	novel	1462	8	NA	NA	6148	0	intron_retention	FALSE	canonical	3	217	junction_3	14.1509716980849	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	1548	False	NA	-9	True	AATAAA	-15	NA	21990550	21983541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523
ES.34590.2	chr9	-	3434	4	NNC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	17.5941909605289	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9523	False	NA	-1	True	ATTAAA	-22	NA	21982575	21966755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21969712_21976996_21977200_21979443_21979488_21982344
ES.34590.20	chr9	-	2045	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	11	-10	intron_retention	FALSE	canonical	3	90	junction_7	50.4534539987914	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAACCTCTTCCCTGGCC	5907	False	NA	-19	True	AATAAA	-5	NA	21996712	21983551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ES.34590.22	chr9	-	1736	6	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	12	-22	intron_retention	FALSE	canonical	1	3	junction_5	92.668441230011	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5908	False	NA	-31	True	NA	NA	NA	21996711	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21996644
ES.34590.23	chr9	-	1679	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	-28	22	-17	-22	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5868	False	NA	-31	True	NA	NA	NA	21996751	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
ES.34590.24	chr9	-	1474	8	NIC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	26	-22	combination_of_known_splicesites	FALSE	canonical	2	13	junction_6	87.0528809496426	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5947	False	NA	-31	True	NA	NA	NA	21996672	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21995318_21995505_21996652
ES.34590.26	chr9	-	1609	9	NNC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	77.6933073050697	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5886	False	NA	-31	True	NA	NA	NA	21996733	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995453_21996644
ES.34590.27	chr9	-	1683	10	NNC	ENSMUSG00000066839.13	novel	1676	9	NA	NA	10	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.9437917838584	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5906	False	NA	-31	True	NA	NA	NA	21996713	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21983877_21984096_21984147_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ES.34590.28	chr9	-	1347	7	NIC	ENSMUSG00000066839.13	novel	1673	9	NA	NA	0	-22	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	88.1394097753982	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5896	False	NA	-31	True	NA	NA	NA	21996723	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21996644
ES.34590.29	chr9	-	1469	8	FSM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	-29	22	-4	-22	multi-exon	FALSE	canonical	3	16	junction_7	78.0418516710419	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATCAAAACC	5892	False	NA	-31	True	NA	NA	NA	21996727	21983563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
ES.34590.3	chr9	-	2216	9	FSM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	-108	0	-77	0	multi-exon	FALSE	canonical	3	20	junction_5	12.3129758791285	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9349	False	NA	-1	True	ATTAAA	-22	NA	21982749	21966755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ES.34590.30	chr9	-	907	1	FSM	ENSMUSG00000066839.13	ENSMUST00000217445.2	893	1	3	-17	3	17	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAAGCCCGTGCCTGAG	5891	False	NA	NA	False	NA	NA	NA	21996728	21995821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_21995800_21996700
ES.34590.5	chr9	-	2174	8	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	32	junction_7	10.0203873810001	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGCCTGGATAATTG	9515	False	NA	-2	True	ATTAAA	-21	NA	21982583	21966756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979488_21982344
ES.34590.6	chr9	-	1496	8	NNC	ENSMUSG00000038895.17	novel	1888	9	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.2020407132446	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTAAGCCTGGATAATT	9534	False	NA	-3	True	ATTAAA	-20	NA	21982564	21966757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21967190_21967288_21967389_21968582_21968695_21968796_21968999_21969541_21969712_21976996_21977213_21979443_21979488_21982344
ES.34590.7	chr9	-	2251	6	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	10	junction_2	13.5793961574144	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTAAGCCTGGATAATT	9424	False	NA	-3	True	ATTAAA	-20	NA	21982674	21966757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_21967190_21967288_21967389_21968582_21969712_21976996_21977213_21979443_21979488_21982344
ES.34590.8	chr9	-	3958	8	NNC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	841	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	18.3525564031448	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTAAGCCTGGATAATT	7710	False	NA	-3	True	ATTAAA	-20	NA	21981731	21966757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979928_21980147
ES.34590.9	chr9	-	1460	8	NNC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.5219120095577	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCCCTAAGCCTGGA	9524	False	NA	-8	True	ATTAAA	-15	NA	21982574	21966762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969013_21976996_21977213_21979443_21979488_21982344
ES.34591.1	chr9	+	207	1	FSM	ENSMUSG00000111446.2	ENSMUST00000214545.2	260	1	214	-161	214	161	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCTTGCACC	587	False	NA	NA	False	AATAAA	-42	NA	22004022	22004229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22004000_22004200
ES.34592.1	chr9	+	1510	7	FSM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	-33	904	19	392	multi-exon	FALSE	canonical	1	1	junction_3	1.49071198499986	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTCTTGGGGCCAGT	7095	False	NA	NA	False	AATAAA	-14	NA	22010530	22020022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22010715_22012436_22012559_22015601_22015669_22016665_22016804_22016965_22017077_22019046_22019194_22019281
ES.34593.1	chr9	-	3481	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	14	-2607	14	2605	multi-exon	FALSE	canonical	3	357	junction_2	52.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGGTGTGACATCAGC	7958	False	NA	NA	False	NA	NA	NA	22028454	22021679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103_22025240_22028405
ES.34593.2	chr9	-	2054	3	FSM	ENSMUSG00000013822.8	ENSMUST00000214394.2	567	3	-13	-1474	-13	1027	multi-exon	FALSE	canonical	2	3	junction_2	229.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAATAAAA	7980	False	NA	NA	False	NA	NA	NA	22028432	22023257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103_22025240_22028232
ES.34593.3	chr9	-	1915	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	2	-1029	2	1027	multi-exon	FALSE	canonical	3	357	junction_2	52.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAATAAAA	7946	False	NA	NA	False	NA	NA	NA	22028466	22023257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103_22025240_22028405
ES.34593.4	chr9	-	907	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	-14	-5	-14	3	multi-exon	FALSE	canonical	3	357	junction_2	52.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTGTACTTCTTGGATA	7930	False	NA	-3	True	AATAAA	-20	NA	22028482	22024281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103_22025240_22028405
ES.34593.5	chr9	-	1096	3	NNC	ENSMUSG00000013822.8	novel	888	3	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGCCGCTGTACTTCT	8000	False	NA	-9	True	AATAAA	-14	NA	22028412	22024287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22024976_22025103_22025240_22028140
ES.34593.6	chr9	-	3996	2	FSM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	-2946	3	8	-1	multi-exon	FALSE	canonical	3	462	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGCCGCTGTACTTCT	8001	False	NA	-9	True	AATAAA	-14	NA	22028411	22024287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103
ES.34593.7	chr9	-	1024	3	FSM	ENSMUSG00000013822.8	ENSMUST00000214394.2	567	3	-13	-444	-13	-1	multi-exon	FALSE	canonical	2	3	junction_2	229.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGCCGCTGTACTTCT	7980	False	NA	-9	True	AATAAA	-14	NA	22028432	22024287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22024976_22025103_22025240_22028232
ES.34593.8	chr9	-	1173	3	NNC	ENSMUSG00000013822.8	novel	888	3	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCCCGCCGCTGTACTTC	8001	False	NA	-10	True	AATAAA	-13	NA	22028411	22024288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22024976_22025103_22025240_22028061
ES.34594.1	chr9	-	179	1	Intergenic	novelGene_28132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACATACAGGCAAAA	788	False	NA	NA	False	NA	NA	NA	22035624	22035445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22035400_22035600
ES.34595.1	chr9	-	1814	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	-460	2	-444	2	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	8452	False	NA	-21	True	AATAAA	-19	NA	22043571	22038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
ES.34595.10	chr9	-	3526	4	NNC	ENSMUSG00000001348.16	novel	1349	5	NA	NA	-498	0	intron_retention	FALSE	canonical	1	1	junction_3	120.028700271597	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	8398	False	NA	-23	True	AATAAA	-17	NA	22043625	22038026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22038559_22038970_22039317_22040826_22041008_22041158
ES.34595.12	chr9	-	1488	6	FSM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	-34	-7	-34	0	multi-exon	TRUE	canonical	2	3	junction_5	116.082039954508	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	8862	False	NA	-23	True	AATAAA	-17	NA	22043161	22038026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818_22041905_22043032
ES.34595.13	chr9	-	154	1	Intergenic	novelGene_28133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAGCAAAACAAAC	6687	False	NA	NA	False	NA	NA	NA	22045336	22045182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22045200_22045300
ES.34595.2	chr9	-	3658	3	ISM	ENSMUSG00000001348.16	ENSMUST00000217643.2	1447	6	-477	-9	-477	2	intron_retention	FALSE	canonical	3	251	junction_1	4.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	8419	False	NA	-21	True	AATAAA	-19	NA	22043604	22038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_22038559_22038970_22039317_22040826
ES.34595.3	chr9	-	1531	6	NNC	ENSMUSG00000001348.16	novel	1447	6	NA	NA	-230	2	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	93.858617079094	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	8666	False	NA	-21	True	AATAAA	-19	NA	22043357	22038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032_22043161_22043229
ES.34595.4	chr9	-	1346	5	NNC	ENSMUSG00000001348.16	novel	1419	5	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	9067	False	NA	-21	True	AATAAA	-19	NA	22042956	22038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
ES.34595.5	chr9	-	1403	5	NNC	ENSMUSG00000001348.16	novel	1349	5	NA	NA	69	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.8262491233	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGTGTGTCATCAAGGT	4610	False	NA	-21	True	AATAAA	-19	NA	22041825	22038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041697
ES.34595.7	chr9	-	1455	6	NNC	ENSMUSG00000001348.16	novel	1376	5	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	119.877604246999	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTGTGTCATCAAGG	5071	False	NA	-22	True	AATAAA	-18	NA	22046952	22038025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22045889_22046027_22046908
ES.34595.8	chr9	-	1396	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	30	-7	30	0	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	9104	False	NA	-23	True	AATAAA	-17	NA	22042919	22038026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
ES.34596.1	chr9	-	172	1	Intergenic	novelGene_28134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTCT	NA	False	NA	NA	False	NA	NA	NA	22052256	22052084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22052100_22052300
ES.34597.1	chr9	+	176	1	Intergenic	novelGene_28135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22053192	22053368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22053200_22053400
ES.34598.1	chr9	+	172	1	Intergenic	novelGene_28136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTCATCTA	NA	False	NA	NA	False	NA	NA	NA	22059824	22059996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22059800_22060000
ES.34599.1	chr9	+	787	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	-82	-10	-82	10	multi-exon	FALSE	canonical	3	566	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTTCTTAATTGTG	NA	False	NA	54	True	NA	NA	NA	22068059	22069664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22068210_22069027
ES.34599.2	chr9	+	1502	1	NIC	ENSMUSG00000010607.9	novel	695	2	NA	NA	1	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAAGACTGTTTCTTCT	NA	False	NA	34	True	AATAAA	-34	NA	22068142	22069644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22068100_22069600
ES.34599.3	chr9	+	741	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	-38	-27	-38	-6	multi-exon	FALSE	canonical	3	126	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTTTCTTCTAAGA	NA	False	NA	38	True	AATAAA	-38	NA	22068203	22069648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22068324_22069027
ES.346.1	chr1	+	212	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTGAGCTATGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	38974907	38975119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_38974900_38975100
ES.3460.1	chr10	+	742	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	-19	471	-19	128	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTGCCTCTTGTCTT	NA	False	NA	6	True	CATAAA	-16	NA	83558709	83598155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ES.3460.10	chr10	+	2699	1	NIC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	22154	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGATTTCTTAATTATT	4936	False	NA	5	True	ATTAAA	-18	NA	83595926	83598625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83595900_83598600
ES.3460.2	chr10	+	4356	4	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	28	128	intron_retention	FALSE	canonical	3	8	junction_2	46.7356632800073	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTGCCTCTTGTCTT	NA	False	NA	6	True	CATAAA	-16	NA	83558756	83598155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83558899_83573772_83573798_83593313_83593345_83593997
ES.3460.3	chr10	+	1158	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	35	1	-26	-1	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGATTTCTTAATTATT	NA	False	NA	5	True	ATTAAA	-18	NA	83558763	83598625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ES.3460.5	chr10	+	987	4	NIC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	46.6761895045715	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGATTTCTTAATTAT	NA	False	NA	4	True	ATTAAA	-17	NA	83558817	83598624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_83558899_83573772_83573798_83595456_83595495_83597781
ES.3460.6	chr10	+	1048	4	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.1976430375211	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGATTTCTTAATTAT	NA	False	NA	4	True	ATTAAA	-17	NA	83558821	83598624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83558899_83568247_83568343_83595461_83595495_83597781
ES.3460.8	chr10	+	1114	5	NNC	ENSMUSG00000087651.4	novel	1194	6	NA	NA	-3449	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.7570507721704	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGATTTCTTAATTATT	5267	False	NA	5	True	ATTAAA	-18	NA	83570323	83598625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_83570445_83593308_83593345_83593997_83594078_83595461_83595495_83597781
ES.3460.9	chr10	+	550	5	FSM	ENSMUSG00000087651.4	ENSMUST00000218623.2	420	5	-2	-128	-2	128	multi-exon	FALSE	canonical	3	19	junction_3	38.0484888004767	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTGCCTCTTGTCTT	8714	False	NA	6	True	CATAAA	-16	NA	83573770	83598155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_83573798_83593308_83593345_83593997_83594078_83595461_83595495_83597781
ES.34600.1	chr9	+	1629	6	NNC	ENSMUSG00000109765.3	novel	1468	3	NA	NA	-5271	-137	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTGTATA	2477	False	NA	NA	False	AATAAA	-14	NA	22073503	22081811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22073568_22074222_22074318_22074792_22074934_22078776_22078904_22079092_22079151_22080667
ES.34600.2	chr9	+	4193	2	NIC	ENSMUSG00000109765.3	novel	1468	3	NA	NA	-2673	-137	intron_retention	FALSE	canonical	2	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTGTATA	5075	False	NA	NA	False	AATAAA	-14	NA	22076101	22081811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22079151_22080667
ES.34600.3	chr9	+	3951	3	FSM	ENSMUSG00000109765.3	ENSMUST00000211082.3	1468	3	-2622	139	-2622	-139	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTGTGTA	5126	False	NA	NA	False	AATAAA	-12	NA	22076152	22081809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22078904_22079092_22079151_22080667
ES.34600.4	chr9	+	1355	4	NNC	ENSMUSG00000109765.3	novel	1468	3	NA	NA	-2033	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGAATAAAACCTG	5715	False	NA	NA	False	AAGAAA	-9	NA	22076741	22081791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22076788_22078776_22078904_22079092_22079151_22080667
ES.34600.5	chr9	+	198	1	Intergenic	novelGene_28137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGCTTACTTATTTATT	8537	False	NA	NA	False	NA	NA	NA	22079563	22079761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22079600_22079800
ES.34601.1	chr9	-	704	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-39	-50	-39	50	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	22097556	22096852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22096900_22097600
ES.34602.1	chr9	+	2986	4	FSM	ENSMUSG00000074472.11	ENSMUST00000178901.8	2958	4	-23	-5	-23	5	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGTGTTTGTGTGTGT	161	False	NA	NA	False	ATTAAA	-22	NA	22099440	22113424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22099528_22108362_22108490_22108670_22108732_22110713
ES.34603.1	chr9	-	176	1	Antisense	novelGene_ENSMUSG00000074472.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGAGC	4188	False	NA	NA	False	NA	NA	NA	22112960	22112784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_22112800_22113000
ES.34604.1	chr9	-	178	2	NNC	ENSMUSG00000090925.3	novel	2307	2	NA	NA	-8911	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTTTTGTAGCTTTT	1710	False	NA	NA	False	NA	NA	NA	22134067	22118082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22118095_22133901
ES.34604.2	chr9	-	227	1	Intergenic	novelGene_28138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGGGAATAACTAAGCA	1710	False	NA	NA	False	AATACA	-10	NA	22134067	22133840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22133800_22134100
ES.34605.1	chr9	+	3191	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-114	-1764	-76	1112	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTTTTA	664	False	NA	NA	False	NA	NA	NA	22136933	22152503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.10	chr9	+	1193	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-43	163	-5	-163	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAACAACACTCCTGC	735	False	NA	NA	False	NA	NA	NA	22137004	22150576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.11	chr9	+	5293	5	NNC	ENSMUSG00000057982.9	novel	1425	6	NA	NA	-4	-4	intron_retention	FALSE	canonical	0	0	junction_1	53.3197899470731	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	736	False	NA	10	True	NA	NA	NA	22137005	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137160_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.12	chr9	+	8454	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	-13	-7844	-4	-4	multi-exon	FALSE	canonical	3	166	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	736	False	NA	10	True	NA	NA	NA	22137005	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315
ES.34605.13	chr9	+	1484	6	FSM	ENSMUSG00000057982.9	ENSMUST00000072465.9	1425	6	-61	2	-4	-2	multi-exon	FALSE	canonical	3	9	junction_5	52.9694251431899	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTGGTTGTGTTT	736	False	NA	12	True	NA	NA	NA	22137005	22154648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22150550_22154329
ES.34605.14	chr9	+	3720	6	NNC	ENSMUSG00000057982.9	novel	1425	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.3418139573088	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	736	False	NA	14	True	NA	NA	NA	22137005	22154650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22152577_22154122
ES.34605.15	chr9	+	5456	3	NIC	ENSMUSG00000057982.9	novel	1800	3	NA	NA	0	1018	intron_retention	FALSE	canonical	3	112	junction_2	27	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	740	False	NA	NA	False	NA	NA	NA	22137009	22152409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22137129_22146315_22149081_22149837
ES.34605.16	chr9	+	3776	4	ISM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-36	-1670	2	1018	intron_retention	FALSE	canonical	3	116	junction_2	20.5480466765633	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	742	False	NA	NA	False	NA	NA	NA	22137011	22152409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970
ES.34605.17	chr9	+	783	6	NNC	ENSMUSG00000057982.9	novel	1425	6	NA	NA	2	40090	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	70.0902275641904	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACCAAGCATTGATGAA	742	False	NA	NA	False	AATAAA	-17	NA	22137011	22194740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22188880_22188929_22194452
ES.34605.18	chr9	+	3278	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	2	-1514	2	1112	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTTTTA	751	False	NA	NA	False	NA	NA	NA	22137020	22152503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
ES.34605.19	chr9	+	5027	3	NIC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	2	-4	intron_retention	FALSE	canonical	1	2	junction_1	55	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	751	False	NA	10	True	NA	NA	NA	22137020	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22137129_22148970_22149081_22149837
ES.34605.2	chr9	+	5299	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-75	-3911	-37	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	703	False	NA	14	True	NA	NA	NA	22136972	22154650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.20	chr9	+	4063	4	NIC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	4	1018	intron_retention	FALSE	canonical	3	112	junction_3	22.0907220343745	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	753	False	NA	NA	False	NA	NA	NA	22137022	22152409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22137129_22146315_22147591_22148970_22149081_22149837
ES.34605.21	chr9	+	4241	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-25	-2903	4	-1008	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGGTTAAGTGGGTAA	753	False	NA	NA	False	ATTAAA	-21	NA	22137022	22153642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.22	chr9	+	1348	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	19	399	-10	-149	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCATATGTATCCAATC	768	False	NA	NA	False	NA	NA	NA	22137037	22150590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
ES.34605.23	chr9	+	5133	4	NNC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_2	77.5557147403651	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGCCTTGGTTGTGTT	769	False	NA	11	True	NA	NA	NA	22137038	22154647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22148970_22149081_22149841
ES.34605.24	chr9	+	4867	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-3	-3551	-3	-360	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTCTCCTGTTTGTTGG	775	False	NA	NA	False	ATTAAA	-16	NA	22137044	22154290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.26	chr9	+	5001	6	NNC	ENSMUSG00000057982.9	novel	1425	6	NA	NA	3	3189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.3418139573088	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAGAAAAAAAAAAAAA	781	False	NA	NA	False	NA	NA	NA	22137050	22157839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22154213_22157621
ES.34605.27	chr9	+	2690	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	3	-1380	3	728	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAACAACTAAC	781	False	NA	NA	False	NA	NA	NA	22137050	22152119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.28	chr9	+	2880	6	NNC	ENSMUSG00000057982.9	novel	1425	6	NA	NA	4	1021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.3418139573088	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTTATTGATAGAAA	782	False	NA	NA	False	NA	NA	NA	22137051	22152412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22150197_22150298
ES.34605.29	chr9	+	5224	5	NIC	ENSMUSG00000057982.9	novel	420	3	NA	NA	19	-2	intron_retention	FALSE	canonical	1	2	junction_1	52.466656077932	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTGGTTGTGTTT	1014	False	NA	12	True	NA	NA	NA	22137283	22154648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22137367_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.3	chr9	+	5089	3	NNC	ENSMUSG00000057982.9	novel	1800	3	NA	NA	-37	-3	intron_retention	FALSE	canonical	0	0	junction_2	83	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGCCTTGGTTGTGTT	703	False	NA	11	True	NA	NA	NA	22136972	22154647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22149841
ES.34605.30	chr9	+	2956	5	NIC	ENSMUSG00000057982.9	novel	420	3	NA	NA	51	1021	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	52.466656077932	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTTATTGATAGAAA	1046	False	NA	NA	False	NA	NA	NA	22137315	22152412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22137367_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.31	chr9	+	2974	5	NNC	ENSMUSG00000057982.9	novel	1800	3	NA	NA	2706	1018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.3197899470731	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTTTATTGATAG	3701	False	NA	NA	False	NA	NA	NA	22139970	22152409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22140043_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.32	chr9	+	6155	1	FSM	ENSMUSG00000111424.2	ENSMUST00000213592.2	2325	1	748	-4578	748	4578	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTGTGGTCATGGTG	4752	False	NA	NA	False	NA	NA	NA	22141021	22147176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22141000_22147200
ES.34605.33	chr9	+	5217	3	NNC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	10191	-5	intron_retention	FALSE	canonical	1	1	junction_2	67.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGTTGCCTTGGTTGTG	NA	False	NA	9	True	NA	NA	NA	22147455	22154645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22147591_22148970_22149245_22149837
ES.34605.34	chr9	+	3604	4	NNC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	10299	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.269628722381	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	NA	False	NA	10	True	NA	NA	NA	22147563	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22147591_22148970_22149081_22149837_22152583_22153924
ES.34605.35	chr9	+	2084	2	NNC	ENSMUSG00000057982.9	novel	1800	3	NA	NA	13953	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	NA	False	NA	10	True	NA	NA	NA	22151217	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22152584_22153928
ES.34605.36	chr9	+	1747	2	Genic_Genomic	ENSMUSG00000057982.9	novel	1425	6	NA	NA	14283	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	NA	False	NA	10	True	NA	NA	NA	22151547	22154646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_22152577_22153928
ES.34605.37	chr9	+	176	1	Intergenic	novelGene_28141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGAGCAAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	22153854	22154030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22153900_22154000
ES.34605.38	chr9	+	162	1	Intergenic	novelGene_28142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	22178415	22178577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22178400_22178600
ES.34605.39	chr9	+	291	1	Intergenic	novelGene_28143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAAATTATGGCCC	NA	False	NA	NA	False	NA	NA	NA	22178416	22178707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22178400_22178700
ES.34605.4	chr9	+	1593	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-64	-216	-26	-34	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCCCTCGTCTTGTGCTG	714	False	NA	0	True	NA	NA	NA	22136983	22150955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.40	chr9	+	3923	3	Intergenic	novelGene_28144	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTCATAACTACAAC	NA	False	NA	NA	False	NA	NA	NA	22179004	22183187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22181411_22181486_22182348_22182531
ES.34605.41	chr9	+	177	1	Intergenic	novelGene_28146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTCCATATGT	NA	False	NA	NA	False	NA	NA	NA	22187715	22187892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22187700_22187900
ES.34605.5	chr9	+	5453	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	-24	-3663	-15	2	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTGTGTTTTGTC	725	False	NA	16	True	NA	NA	NA	22136994	22154652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
ES.34605.6	chr9	+	989	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	-18	-374	-9	-338	multi-exon	FALSE	canonical	3	166	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTGTGGTCATGGTG	731	False	NA	NA	False	NA	NA	NA	22137000	22147176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315
ES.34605.8	chr9	+	1367	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	-43	-11	-5	11	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGCTTTTTTAATTC	735	False	NA	NA	False	NA	NA	NA	22137004	22150750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ES.34605.9	chr9	+	4150	6	NNC	ENSMUSG00000057982.9	novel	1766	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.806369103778	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTGGTTGTGTTT	735	False	NA	12	True	NA	NA	NA	22137004	22154648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837_22152616_22153904
ES.34606.1	chr9	+	185	1	Intergenic	novelGene_28147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATGCTGAACAAG	NA	False	NA	NA	False	NA	NA	NA	22212933	22213118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22212900_22213100
ES.34607.1	chr9	-	2269	1	Intergenic	novelGene_28139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22140106	22137837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22137800_22140100
ES.34608.1	chr9	-	152	1	Antisense	novelGene_ENSMUSG00000111424.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	22140301	22140149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_22140100_22140300
ES.34609.1	chr9	-	177	1	Intergenic	novelGene_28140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAACCCATAAAACT	NA	False	NA	NA	False	NA	NA	NA	22152684	22152507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22152500_22152700
ES.3461.1	chr10	-	4623	1	Intergenic	novelGene_2664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATTCTTAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	83581685	83577062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_83577100_83581700
ES.34610.1	chr9	-	5032	1	Genic_Genomic	ENSMUSG00000062794.9	novel	NA	NA	NA	NA	10698	3264	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGAGTTGTGGTCCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	22160493	22155461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_22155500_22160500
ES.34610.10	chr9	-	5445	3	NNC	ENSMUSG00000062794.9	novel	3574	5	NA	NA	-45	-5436	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAACCAAACTAAATTCT	NA	False	NA	NA	False	NA	NA	NA	22171236	22164161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22165553_22165597_22169468_22171052
ES.34610.2	chr9	-	3711	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-127	-10	-127	10	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATGTAGGTCCCATTGA	NA	False	NA	NA	False	AATAAA	-26	NA	22171318	22158715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ES.34610.4	chr9	-	3787	5	NNC	ENSMUSG00000062794.9	novel	3574	5	NA	NA	-58	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.792542640083	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCTAGTCTGAGATG	NA	False	NA	NA	False	AATAAA	-13	NA	22171249	22158728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22161837_22162823_22162928_22165150_22165402_22169340_22169468_22171052
ES.34610.5	chr9	-	3397	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-11	188	-11	-188	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATCTGAGTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	22171202	22158913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ES.34610.7	chr9	-	3291	5	NNC	ENSMUSG00000062794.9	novel	3574	5	NA	NA	-38	-317	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	23.0149407994025	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTAAGGCAGGAGAATG	NA	False	NA	NA	False	NA	NA	NA	22171229	22159042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22161833_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ES.34610.8	chr9	-	3039	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	-53	588	-53	-588	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTATTTAATTTGAA	NA	False	NA	NA	False	NA	NA	NA	22171244	22159313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ES.34610.9	chr9	-	2243	5	NNC	ENSMUSG00000062794.9	novel	3574	5	NA	NA	-73	-1400	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	23.0149407994025	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	22171264	22160125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22161833_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ES.34611.1	chr9	-	156	1	Intergenic	novelGene_28145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAATAAAAAAAAAAA	3726	False	NA	NA	False	NA	NA	NA	22182533	22182377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22182400_22182500
ES.34612.1	chr9	-	2299	11	NNC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-43	5319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.773712308775	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTCATGGTCTTTTCA	NA	False	NA	NA	False	AGTAAA	-24	NA	22218987	22182724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22183058_22184175_22184862_22185482_22185551_22190122_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.10	chr9	-	3283	7	ISM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-38	1939	-28	380	intron_retention	FALSE	canonical	3	16	junction_6	8.75119039521672	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTGTACATCACAGGAC	NA	False	NA	NA	False	NA	NA	NA	22218972	22189982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807
ES.34612.11	chr9	-	1380	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-87	1945	-77	374	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAACTCGCTGTACATCA	NA	False	NA	NA	False	NA	NA	NA	22219021	22189988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.12	chr9	-	1485	9	NNC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-40	371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.9744574192189	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACAACTCGCTGTACA	NA	False	NA	NA	False	NA	NA	NA	22218984	22189991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22212925_22213071_22216807_22216899_22218844
ES.34612.13	chr9	-	2062	1	Genic_Genomic	ENSMUSG00000066829.8	novel	NA	NA	NA	NA	-43	-15077	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTAACCTTGATTGT	NA	False	NA	NA	False	NA	NA	NA	22218987	22216925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_22216900_22219000
ES.34612.2	chr9	-	3444	9	NNC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-40	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.9744574192189	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCATTTTCTTTGGGCA	NA	False	NA	3	True	AATAAA	-28	NA	22218984	22188032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22212925_22213071_22216807_22216899_22218844
ES.34612.3	chr9	-	3309	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-60	-11	-50	11	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCATTTTCTTTGGGCA	NA	False	NA	3	True	AATAAA	-28	NA	22218994	22188032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.4	chr9	-	3179	7	FSM	ENSMUSG00000066829.8	ENSMUST00000215202.2	822	7	-40	-2317	-40	-2	multi-exon	FALSE	canonical	0	0	junction_1	13.6503968196288	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCAGTGTAAATTAAGCA	NA	False	NA	-10	True	AATAAA	-15	NA	22218984	22188045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22190577_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.5	chr9	-	3194	7	NIC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-41	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	12.9314431608472	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCAGTGTAAATTAAGCA	NA	False	NA	-10	True	AATAAA	-15	NA	22218985	22188045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22216807_22216899_22218844
ES.34612.6	chr9	-	3305	8	NNC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.402710660953	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCAGTGTAAATTAAGCA	NA	False	NA	-10	True	AATAAA	-15	NA	22218988	22188045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22190577_22191733_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.7	chr9	-	6565	7	NIC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-35	-350	intron_retention	FALSE	canonical	0	0	junction_6	13.6188186793944	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCATGACTTTTTGAGTG	NA	False	NA	NA	False	TATAAA	-27	NA	22218979	22188393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22190577_22191748_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22217820
ES.34612.8	chr9	-	1415	9	NNC	ENSMUSG00000066829.8	novel	3238	8	NA	NA	-40	-788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.8007568135638	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATAAAGGACCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	22218984	22188831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22189038_22190122_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34612.9	chr9	-	2499	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	-52	791	-42	-791	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAATATAAAGGACC	NA	False	NA	NA	False	AATAAA	-7	NA	22218986	22188834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ES.34613.1	chr9	-	195	1	Intergenic	novelGene_28148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	22227190	22226995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22227000_22227200
ES.34614.1	chr9	-	231	1	Intergenic	novelGene_28149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATAATTGGATCAAAG	8656	False	NA	NA	False	NA	NA	NA	22231435	22231204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22231200_22231400
ES.34615.1	chr9	-	1168	1	FSM	ENSMUSG00000094627.3	ENSMUST00000178676.3	273	1	-96	-799	-96	799	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACACTAAAG	7322	False	NA	NA	False	AATAAA	-22	NA	22232769	22231601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22231600_22232800
ES.34616.1	chr9	+	3793	1	Intergenic	novelGene_28150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCAGTTGTGTGGCTGG	8601	False	NA	NA	False	NA	NA	NA	22234347	22238140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22234300_22238100
ES.34616.2	chr9	+	158	1	Intergenic	novelGene_28151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAATTTCCAC	NA	False	NA	NA	False	NA	NA	NA	22236765	22236923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22236800_22236900
ES.34617.1	chr9	+	175	1	Intergenic	novelGene_28153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	22284728	22284903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22284700_22284900
ES.34618.1	chr9	+	2141	8	NNC	ENSMUSG00000036411.11	novel	1382	5	NA	NA	-22602	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.99489470117416	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTGTTCAGTTCT	NA	False	NA	NA	False	ATTAAA	-10	NA	22300206	22355973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22300452_22335408_22335722_22335807_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ES.34618.10	chr9	+	4310	7	NIC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	15	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	4.64578662158878	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAACTTTTTGTTCAGTT	NA	False	NA	NA	False	ATTAAA	-8	NA	22322858	22355971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22323046_22335807_22336104_22341651_22341796_22342971_22345647_22346390_22346697_22351162_22351261_22355367
ES.34618.11	chr9	+	191	1	Intergenic	novelGene_28157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACTAAATTCTAAAATTA	NA	False	NA	NA	False	NA	NA	NA	22338255	22338446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22338300_22338400
ES.34618.12	chr9	+	1918	2	ISM	ENSMUSG00000036411.11	ENSMUST00000213133.2	1382	5	8388	4	8388	-4	3prime_fragment	FALSE	canonical	3	12	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTGTTCAGTTCT	NA	False	NA	NA	False	ATTAAA	-10	NA	22349948	22355973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_22351261_22355367
ES.34618.2	chr9	+	2086	7	NNC	ENSMUSG00000036411.11	novel	1382	5	NA	NA	-22597	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.13991411612474	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTGTTCAGTTCT	NA	False	NA	NA	False	ATTAAA	-10	NA	22300211	22355973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22300316_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ES.34618.3	chr9	+	176	1	Intergenic	novelGene_28155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAACTGTTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	22311025	22311201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22311000_22311200
ES.34618.4	chr9	+	2111	7	NNC	ENSMUSG00000036411.11	novel	1382	5	NA	NA	-9275	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.8151743807532	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTTCTTATTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	22313533	22355980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22313656_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ES.34618.5	chr9	+	1325	3	NNC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	-9273	-10093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTGTGTTCTCTGACTA	NA	False	NA	NA	False	AATAAA	-14	NA	22313535	22336308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22313656_22322740_22323046_22335408
ES.34618.6	chr9	+	1521	5	NIC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.52268050859363	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTTCTTATTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	22322837	22355980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22323046_22335807_22336104_22346390_22346697_22351162_22351261_22355367
ES.34618.7	chr9	+	5473	6	NIC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	-3	-4	intron_retention	FALSE	canonical	2	6	junction_3	3.96988664825584	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTTGTTCAGTTCT	NA	False	NA	NA	False	ATTAAA	-10	NA	22322840	22355973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22323046_22335408_22336104_22341651_22341796_22342971_22346697_22351162_22351261_22355367
ES.34618.8	chr9	+	3447	6	NNC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	-1	-4558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.31740662898458	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTTTCATCCATC	NA	False	NA	NA	False	AATAGA	-14	NA	22322842	22351409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22323046_22335807_22336104_22341651_22341796_22342971_22345223_22346390_22346697_22351162
ES.34618.9	chr9	+	5068	6	NIC	ENSMUSG00000036411.11	novel	2223	7	NA	NA	-1	2	intron_retention	FALSE	canonical	1	1	junction_1	3.96988664825584	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAAACTTTTTGTTCAG	NA	False	NA	NA	False	ATTAAA	-6	NA	22322842	22355969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22323046_22335807_22336104_22341651_22341796_22342971_22346697_22351162_22351261_22355367
ES.34619.1	chr9	-	5490	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	26	-911	26	911	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCAAGTGACTGACCTA	7209	False	NA	-5	True	AGTAAA	-19	NA	22300458	22242396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.10	chr9	-	5349	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	802	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGCTGTTATTGAGC	7235	False	NA	NA	False	AATAAA	-23	NA	22300432	22242505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262337_22263501_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.101	chr9	-	4572	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	53	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	121.898606724446	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7236	False	NA	-7	True	AATAAA	-16	NA	22300431	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284652_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.103	chr9	-	9045	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	198.034771343714	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7185	False	NA	-7	True	AATAAA	-16	NA	22300482	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22256742_22257225_22259513_22260597_22262215_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287428_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.104	chr9	-	2841	16	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-6756	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	194.132417580258	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	NA	False	NA	-7	True	AATAAA	-16	NA	22274218	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22256742_22256801_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981
ES.34619.105	chr9	-	4540	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.459496446923	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7240	False	NA	-7	True	AATAAA	-16	NA	22300427	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262345_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275391_22279677_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.106	chr9	-	4490	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	102	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	159.592479889211	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7285	False	NA	-7	True	AATAAA	-16	NA	22300382	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262364_22264058_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271851_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.107	chr9	-	5389	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.316061794885	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7180	False	NA	-7	True	AATAAA	-16	NA	22300487	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273200_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.109	chr9	-	4679	26	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	164.803320354901	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7217	False	NA	-7	True	AATAAA	-16	NA	22300450	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22256742_22256801_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.110	chr9	-	4678	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.769745484697	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7218	False	NA	-7	True	AATAAA	-16	NA	22300449	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250102_22250248_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.114	chr9	-	7443	21	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	34	-5	intron_retention	FALSE	canonical	3	398	junction_4	54.7639251697685	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGCATCAGTTATTTAA	7217	False	NA	-8	True	AATAAA	-15	NA	22300450	22243312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.117	chr9	-	4633	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	151.918095533325	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCATCAGTTATTTA	7197	False	NA	-9	True	AATAAA	-14	NA	22300470	22243313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262341_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.118	chr9	-	6371	24	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	0	-6	intron_retention	FALSE	canonical	3	159	junction_4	115.72436452374	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCATCAGTTATTTA	7183	False	NA	-9	True	AATAAA	-14	NA	22300484	22243313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.119	chr9	-	4612	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	151.491193134196	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGCATCAGTTATTTA	7218	False	NA	-9	True	AATAAA	-14	NA	22300449	22243313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274212_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.12	chr9	-	5641	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	353	793	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_24	178.202755933297	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAAAGACTGGCTG	7536	False	NA	NA	False	AATAAA	-14	NA	22300131	22242514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287435_22287819_22291345_22291652_22293466_22293624_22299720
ES.34619.124	chr9	-	2936	17	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	6871	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	144.466475349819	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAAGCATCAGTTATT	NA	False	NA	-11	True	AATAAA	-12	NA	22276649	22243315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22276602
ES.34619.126	chr9	-	4315	13	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-5361	-8	intron_retention	FALSE	canonical	3	159	junction_4	153.230944075347	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAAGCATCAGTTATT	NA	False	NA	-11	True	AATAAA	-12	NA	22272823	22243315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117
ES.34619.128	chr9	-	3809	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	34	762	34	353	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACTAGCCAGTTATTCA	7217	False	NA	NA	False	AATATA	-27	NA	22300450	22244069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.129	chr9	-	3642	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	207	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_20	119.219278201539	683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGCAGTATTTATATC	7235	False	NA	NA	False	TATAAA	-26	NA	22300432	22244215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287435_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.13	chr9	-	5342	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	159.385128062875	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAAAGACTGGCTG	7235	False	NA	NA	False	AATAAA	-14	NA	22300432	22242514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262381_22264078_22264136_22264625_22264675_22267347_22267480_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.130	chr9	-	3918	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	323	206	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_23	120.937938121694	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGCAGTATTTATAT	7506	False	NA	NA	False	TATAAA	-25	NA	22300161	22244216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22299720
ES.34619.131	chr9	-	3725	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	21	202	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATATTGTGCAGTATTT	7204	False	NA	NA	False	TATAAA	-21	NA	22300463	22244220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.132	chr9	-	6216	22	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	200	intron_retention	FALSE	canonical	3	398	junction_4	53.8568691837601	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACATATTGTGCAGTAT	7218	False	NA	NA	False	TATAAA	-19	NA	22300449	22244222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.134	chr9	-	3310	21	NIC	ENSMUSG00000036777.9	novel	718	10	NA	NA	-17	-1006	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	93.3648086807872	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACCAACCCTTGATTT	7166	False	NA	NA	False	AATAAA	-33	NA	22300501	22260378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.136	chr9	-	3236	20	NNC	ENSMUSG00000036777.9	novel	718	10	NA	NA	35	-1032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	145.592818154128	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATTTTTTAAAAAG	7218	False	NA	NA	False	AATAAA	-21	NA	22300449	22260404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.137	chr9	-	3122	19	NNC	ENSMUSG00000036777.9	novel	443	5	NA	NA	35	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	129.123170693244	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTATCCTTTCTTTGT	7218	False	NA	NA	False	AATAAA	-18	NA	22300449	22263216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22263434_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.138	chr9	-	3132	19	NIC	ENSMUSG00000036777.9	novel	443	5	NA	NA	0	9	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	127.844728836812	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTTTATCCTTTCTT	7183	False	NA	NA	False	AATAAA	-15	NA	22300484	22263219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22263412_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.139	chr9	-	104	1	Intergenic	novelGene_28152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22275210	22275106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22275100_22275200
ES.34619.15	chr9	-	5104	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	66	793	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	121.585057782576	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAAAGACTGGCTG	7249	False	NA	NA	False	AATAAA	-14	NA	22300418	22242514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287660_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.16	chr9	-	5957	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	53	791	intron_retention	FALSE	canonical	0	0	junction_6	151.918095533325	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATATAAAAGACTGGC	7236	False	NA	NA	False	AATAAA	-12	NA	22300431	22242516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22262927_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.17	chr9	-	5387	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	6	791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	120.882206864815	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATATAAAAGACTGGC	7189	False	NA	NA	False	AATAAA	-12	NA	22300478	22242516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262367_22264058_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.18	chr9	-	4706	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	-67	-34	-67	34	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGTGTATGTCCTGGT	7116	False	NA	31	True	AAGAAA	-16	NA	22300551	22243273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.19	chr9	-	4724	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-46	19	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTGATGTATTGC	7137	False	NA	16	True	AATAAA	-39	NA	22300530	22243288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.2	chr9	-	5542	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	29	908	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	151.918095533325	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATTGCAAGTGACTGAC	7212	False	NA	-8	True	AGTAAA	-16	NA	22300455	22242399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.20	chr9	-	4655	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-27	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTGTGATGTATTGC	7156	False	NA	16	True	AATAAA	-39	NA	22300511	22243288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.23	chr9	-	4410	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	34	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	151.964217050886	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTCTCTGTGTGATG	7217	False	NA	10	True	AATAAA	-33	NA	22300450	22243294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287660_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.26	chr9	-	5402	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	42	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	151.709128671357	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTATTTAAGAAATTCTC	7225	False	NA	1	True	AATAAA	-24	NA	22300442	22243303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273200_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.27	chr9	-	4951	23	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-27	3	intron_retention	FALSE	canonical	3	398	junction_4	56.7206435520497	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTATTTAAGAAATTCT	7156	False	NA	0	True	AATAAA	-23	NA	22300511	22243304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.3	chr9	-	5522	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	43	906	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACATTGCAAGTGACTG	7226	False	NA	-10	True	AGTAAA	-14	NA	22300441	22242401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.30	chr9	-	6295	23	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	31	3	intron_retention	FALSE	canonical	3	398	junction_4	55.7037062731196	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTATTTAAGAAATTCT	7214	False	NA	0	True	AATAAA	-23	NA	22300453	22243304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.32	chr9	-	5841	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	28	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	121.807760158303	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTATTTAAGAAATTCT	7211	False	NA	0	True	AATAAA	-23	NA	22300456	22243304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22272720_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.33	chr9	-	4828	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	325	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_23	120.937938121694	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTATTTAAGAAATTCT	7508	False	NA	0	True	AATAAA	-23	NA	22300159	22243304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22299720
ES.34619.34	chr9	-	4328	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	121.585057782576	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTATTTAAGAAATTCT	7235	False	NA	0	True	AATAAA	-23	NA	22300432	22243304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287660_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.36	chr9	-	4476	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	186.378469350483	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTTATTTAAGAAATTC	7197	False	NA	-1	True	AATAAA	-22	NA	22300470	22243305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22269486_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273200_22273282_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.37	chr9	-	4577	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	152.067875926801	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTTATTTAAGAAATTC	7240	False	NA	-1	True	AATAAA	-22	NA	22300427	22243305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270018_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.38	chr9	-	5331	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	121.260877359814	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTTATTTAAGAAATTC	7240	False	NA	-1	True	AATAAA	-22	NA	22300427	22243305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273200_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.40	chr9	-	4515	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	122.025455214176	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7240	False	NA	-3	True	AATAAA	-20	NA	22300427	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300298
ES.34619.41	chr9	-	4526	2	ISM	ENSMUSG00000036777.9	ENSMUST00000215006.2	718	10	15982	-1115	13891	0	3prime_fragment	FALSE	canonical	3	564	junction_1	0	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	NA	False	NA	-3	True	AATAAA	-20	NA	22248661	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_22244470_22245297
ES.34619.43	chr9	-	4649	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	151.918095533325	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7197	False	NA	-3	True	AATAAA	-20	NA	22300470	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.45	chr9	-	4863	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	150.422731872177	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7197	False	NA	-3	True	AATAAA	-20	NA	22300470	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263412_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.46	chr9	-	4879	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_24	151.222219670994	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7508	False	NA	-3	True	AATAAA	-20	NA	22300159	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22299720
ES.34619.48	chr9	-	5162	26	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	187.112817305496	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7240	False	NA	-3	True	AATAAA	-20	NA	22300427	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22256742_22256801_22260542_22260597_22262215_22262329_22262669_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.5	chr9	-	5491	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-28	804	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGTTATTGAGCAT	7155	False	NA	-112	True	AATAAA	-25	NA	22300512	22242503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.50	chr9	-	4567	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7218	False	NA	-3	True	AATAAA	-20	NA	22300449	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262344_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.51	chr9	-	5896	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.621510723385	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7175	False	NA	-3	True	AATAAA	-20	NA	22300492	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22262669_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273200_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.53	chr9	-	4339	21	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	165.161095600629	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7173	False	NA	-3	True	AATAAA	-20	NA	22300494	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262355_22263509_22263549_22264078_22264103_22269486_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.55	chr9	-	4610	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7175	False	NA	-3	True	AATAAA	-20	NA	22300492	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263490_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.57	chr9	-	6323	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	0	intron_retention	FALSE	non_canonical	0	0	junction_6	155.331536925495	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7240	False	NA	-3	True	AATAAA	-20	NA	22300427	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262354_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.6	chr9	-	5417	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	-8	-804	-8	804	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGTTATTGAGCAT	7175	False	NA	-112	True	AATAAA	-25	NA	22300492	22242503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.61	chr9	-	4947	24	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	28	0	intron_retention	FALSE	canonical	3	159	junction_4	115.360010172806	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7211	False	NA	-3	True	AATAAA	-20	NA	22300456	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.62	chr9	-	4513	24	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	154.521041812916	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7218	False	NA	-3	True	AATAAA	-20	NA	22300449	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.64	chr9	-	4564	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7218	False	NA	-3	True	AATAAA	-20	NA	22300449	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262337_22263501_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.65	chr9	-	3054	17	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.3256637809	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	NA	False	NA	-3	True	AATAAA	-20	NA	22283561	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262344_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22283451
ES.34619.68	chr9	-	6096	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	34	0	intron_retention	FALSE	canonical	0	0	junction_9	165.810371705389	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7217	False	NA	-3	True	AATAAA	-20	NA	22300450	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22269486_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286217_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.69	chr9	-	4380	23	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	123.157671232738	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7235	False	NA	-3	True	AATAAA	-20	NA	22300432	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.7	chr9	-	4905	15	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-6439	804	intron_retention	FALSE	canonical	0	0	junction_14	195.136163867643	690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGTTATTGAGCAT	NA	False	NA	-112	True	AATAAA	-25	NA	22273901	22242503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22272720
ES.34619.73	chr9	-	4561	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	121.643766996708	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7234	False	NA	-3	True	AATAAA	-20	NA	22300433	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293459_22293624_22300265
ES.34619.74	chr9	-	5807	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.471325278503	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7292	False	NA	-3	True	AATAAA	-20	NA	22300375	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245301_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22272720_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.76	chr9	-	5889	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	180.447081822828	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7218	False	NA	-3	True	AATAAA	-20	NA	22300449	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22272720_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.77	chr9	-	4409	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	160.213078816364	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7175	False	NA	-3	True	AATAAA	-20	NA	22300492	22243307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284652_22286222_22286437_22287660_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.78	chr9	-	4383	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	123.691673791283	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7204	False	NA	-6	True	AATAAA	-17	NA	22300463	22243310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22269486_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.79	chr9	-	4600	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	176.851843838811	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7235	False	NA	-6	True	AATAAA	-17	NA	22300432	22243310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263488_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274215_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.8	chr9	-	5378	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGTTATTGAGCAT	7218	False	NA	-112	True	AATAAA	-25	NA	22300449	22242503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.80	chr9	-	4654	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	178.934253061605	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATCAGTTATTTAAGA	7183	False	NA	-6	True	AATAAA	-17	NA	22300484	22243310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262348_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287435_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.85	chr9	-	4711	26	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	176.323774914219	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7235	False	NA	-7	True	AATAAA	-16	NA	22300432	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271093_22271202_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.86	chr9	-	4380	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	51	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	180.349157263126	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7234	False	NA	-7	True	AATAAA	-16	NA	22300433	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287660_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.87	chr9	-	4410	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	162.412509152626	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7180	False	NA	-7	True	AATAAA	-16	NA	22300487	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22269486_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.88	chr9	-	4181	5	NNC	ENSMUSG00000036777.9	novel	718	10	NA	NA	8789	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	247.471715555536	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	6155	False	NA	-7	True	AATAAA	-16	NA	22253763	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22251985_22252708
ES.34619.89	chr9	-	4382	23	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	62	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	124.369658612827	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7245	False	NA	-7	True	AATAAA	-16	NA	22300422	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22300265
ES.34619.9	chr9	-	5415	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	52	804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	151.918095533325	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGTTATTGAGCAT	7235	False	NA	-112	True	AATAAA	-25	NA	22300432	22242503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262355_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.90	chr9	-	6261	22	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	57	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	124.641417647575	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7240	False	NA	-7	True	AATAAA	-16	NA	22300427	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262346_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.91	chr9	-	6333	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	35	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	155.331536925495	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7218	False	NA	-7	True	AATAAA	-16	NA	22300449	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262342_22263505_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.96	chr9	-	4520	24	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	51	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	156.747265060574	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7234	False	NA	-7	True	AATAAA	-16	NA	22300433	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270018_22271705_22271854_22272117_22272264_22273981_22274215_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.97	chr9	-	4726	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	184.232864234069	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7190	False	NA	-7	True	AATAAA	-16	NA	22300477	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274215_22274299_22274431_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287428_22287819_22291345_22291652_22293466_22293624_22300265
ES.34619.99	chr9	-	4551	23	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.921055612445	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAGTTATTTAAG	7221	False	NA	-7	True	AATAAA	-16	NA	22300446	22243311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262339_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ES.3462.1	chr10	+	4894	1	Intergenic	novelGene_2665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	83623515	83628409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_83623500_83628400
ES.34620.1	chr9	-	154	1	Intergenic	novelGene_28154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTCATTCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	22307931	22307777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22307800_22307900
ES.34621.1	chr9	-	379	2	Antisense	novelGene_ENSMUSG00000036411.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAGAAGAAGAATCC	NA	False	NA	NA	False	NA	NA	NA	22331086	22313918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_22314109_22330897
ES.34621.2	chr9	-	173	1	Intergenic	novelGene_28156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCAACTTTCAAC	2666	False	NA	NA	False	NA	NA	NA	22318808	22318635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22318600_22318800
ES.34622.1	chr9	+	4196	1	Genic_Genomic	ENSMUSG00000091159.2	novel	NA	NA	NA	NA	4523	946	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGAGGTAGAAGGTCC	NA	False	NA	NA	False	NA	NA	NA	22370108	22374304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_22370100_22374300
ES.34623.1	chr9	-	1163	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	-32	3	-22	-3	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAGTCATTATTAATA	9478	False	NA	-4	True	AATAAA	-20	NA	22379676	22359609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ES.34623.2	chr9	-	3432	5	ISM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	7031	3	6853	-3	3prime_fragment	FALSE	canonical	3	365	junction_2	11.247221879202	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAGTCATTATTAATA	3689	False	NA	-4	True	AATAAA	-20	NA	22372613	22359609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006
ES.34624.1	chr9	+	3672	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	-156	-21	-140	15	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACCAGGGTTGTATGTA	NA	False	NA	18	True	AATAAA	-35	NA	22386870	22799591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.10	chr9	+	3410	21	NIC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_13	22.0369575940056	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387006	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.11	chr9	+	3374	22	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	24.5557351139021	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387009	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.12	chr9	+	3960	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	7	-585	0	585	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	22387017	22800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.13	chr9	+	3240	23	NNC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	21.2011714162564	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387018	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387144_22387406_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.14	chr9	+	3413	23	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	23.4960872424002	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387018	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387352_22400841_22400887_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.15	chr9	+	3560	23	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_3	24.1048415972757	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387027	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22402113_22402237_22408004_22408156_22410637_22410839_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.16	chr9	+	4135	23	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	4	585	intron_retention	FALSE	canonical	0	0	junction_22	24.2875763228109	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	22387030	22800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799160
ES.34624.17	chr9	+	3598	24	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	7	3	intron_retention	FALSE	canonical	0	0	junction_2	25.7023091501945	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGACTGAATTTATAACCA	NA	False	NA	6	True	AATAAA	-23	NA	22387033	22799579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387487_22387865_22387922_22400841_22400887_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.18	chr9	+	3121	20	ISM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	27	75444	11	-75438	5prime_fragment	FALSE	canonical	3	30	junction_1	13.480056059132	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTTACCAAATGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	22387037	22724132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616
ES.34624.19	chr9	+	2734	19	NNC	ENSMUSG00000035919.17	novel	3382	22	NA	NA	15	1707	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	21.4110275037288	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTCTAAGCCTCTTA	NA	False	NA	NA	False	AATAAA	-13	NA	22387041	22593516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22593200
ES.34624.2	chr9	+	3787	24	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-125	3	intron_retention	FALSE	canonical	0	0	junction_2	33.4416513552878	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAACTGGACTGAATTTA	NA	False	NA	0	True	AATAAA	-17	NA	22386885	22799573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387487_22387865_22387922_22400841_22400887_22402113_22402237_22406614_22406727_22408004_22408156_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.20	chr9	+	3476	24	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	20	3	intron_retention	FALSE	canonical	0	0	junction_2	25.5222205717127	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAACTGGACTGAATTTA	NA	False	NA	0	True	AATAAA	-17	NA	22387046	22799573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22387865_22387922_22390353_22390431_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.21	chr9	+	4064	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	21	-590	21	584	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	22387047	22800160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.22	chr9	+	3161	22	NNC	ENSMUSG00000035919.17	novel	3382	22	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_5	20.5021983224829	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGGACTGAATTTATA	NA	False	NA	2	True	AATAAA	-19	NA	22387047	22799575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425364_22479157_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.23	chr9	+	3673	23	NNC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_22	28.4742888228476	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387052	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387487_22402113_22402237_22408004_22408156_22410637_22410839_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799160
ES.34624.24	chr9	+	2228	10	ISM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	40	307830	31	935	5prime_fragment	FALSE	canonical	3	14	junction_1	25.298221281347	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGTGAATGGGTGTT	NA	False	NA	NA	False	AATGAA	-16	NA	22387057	22491740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759
ES.34624.25	chr9	+	3388	24	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-57	0	intron_retention	FALSE	canonical	0	0	junction_2	25.5222205717127	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387105	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387352_22387865_22387922_22400841_22400887_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.26	chr9	+	3530	24	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-43	0	intron_retention	FALSE	canonical	1	1	junction_4	26.6657529774157	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387119	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22410637_22410839_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.27	chr9	+	2235	17	ISM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	125	217259	-27	-9492	5prime_fragment	FALSE	canonical	3	30	junction_1	14.0466577430362	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGAGTGGTATGCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	22387135	22582317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080
ES.34624.28	chr9	+	3300	23	NNC	ENSMUSG00000035919.17	novel	3382	22	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_17	24.7685567798909	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387137	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22584667_22584713_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.29	chr9	+	3873	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	144	-592	-1	586	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	22387161	22800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.3	chr9	+	3806	25	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-121	3	intron_retention	FALSE	canonical	0	0	junction_2	32.4909976848289	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAACTGGACTGAATTTA	NA	False	NA	0	True	AATAAA	-17	NA	22386889	22799573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387352_22387865_22387922_22400841_22400887_22402113_22402237_22408004_22408156_22410637_22410839_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590365_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.30	chr9	+	2757	18	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_1	20.3687459886167	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387176	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387352_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.31	chr9	+	3824	22	NNC	ENSMUSG00000035919.17	novel	3045	22	NA	NA	3316	0	intron_retention	FALSE	canonical	0	0	junction_1	18.563001751161	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	1186	False	NA	-3	True	AATAAA	-14	NA	22390478	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22391268_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.32	chr9	+	3125	22	NNC	ENSMUSG00000035919.17	novel	3045	22	NA	NA	-4377	0	intron_retention	FALSE	canonical	0	0	junction_1	18.563001751161	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	8455	False	NA	-3	True	AATAAA	-14	NA	22397747	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22397838_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.33	chr9	+	2890	19	NNC	ENSMUSG00000035919.17	novel	1640	12	NA	NA	-5968	1	intron_retention	FALSE	canonical	0	0	junction_1	19.8641217609371	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGACTGAATTTATAAC	6198	False	NA	4	True	AATAAA	-21	NA	22417784	22799577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22417972_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.34	chr9	+	201	1	Intergenic	novelGene_28161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGCCTACATCAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	22653929	22654130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22653900_22654100
ES.34624.35	chr9	+	177	1	Intergenic	novelGene_28162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGATAAAAATG	NA	False	NA	NA	False	NA	NA	NA	22770246	22770423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_22770200_22770400
ES.34624.4	chr9	+	3762	23	NNC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	-78	0	intron_retention	FALSE	canonical	0	0	junction_17	25.6099154351404	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22386932	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22584463_22584631_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.5	chr9	+	3484	22	NNC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-78	-2	intron_retention	FALSE	canonical	0	0	junction_13	28.2634191434441	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGACTGAATTTAT	NA	False	NA	1	True	AATAAA	-18	NA	22386932	22799574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555052_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.6	chr9	+	3083	18	NIC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	-25	0	intron_retention	FALSE	canonical	0	0	junction_1	20.3687459886167	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22386985	22799570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387487_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.7	chr9	+	3452	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	-21	-6	-14	0	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22386996	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.8	chr9	+	3580	23	NIC	ENSMUSG00000035919.17	novel	3425	23	NA	NA	-7	0	intron_retention	FALSE	canonical	3	12	junction_1	19.496609156339	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387003	22799576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34624.9	chr9	+	3474	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	-7	-85	-7	85	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGACTTGGATGTGGTT	NA	False	NA	88	True	NA	NA	NA	22387003	22799661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ES.34625.1	chr9	-	176	1	Intergenic	novelGene_28158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	22400105	22399929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22399900_22400100
ES.34626.1	chr9	-	175	1	Intergenic	novelGene_28159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22475889	22475714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22475700_22475900
ES.34627.1	chr9	-	2126	1	Intergenic	novelGene_28160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22534468	22532342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22532300_22534500
ES.34628.1	chr9	-	1468	1	Intergenic	novelGene_28163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCTTGGCTAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	22777247	22775779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_22775800_22777200
ES.34629.1	chr9	+	3907	2	Antisense	novelGene_ENSMUSG00000111002.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTCTGGTGAGTGACT	NA	False	NA	NA	False	NA	NA	NA	24180675	24209232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_24184564_24209213
ES.3463.1	chr10	-	2834	2	NNC	ENSMUSG00000111699.2	novel	2727	2	NA	NA	-14414	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTCCATGTGTTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	83855138	83828591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_83831243_83854955
ES.34630.1	chr9	+	3074	1	Antisense	novelGene_ENSMUSG00000043067.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATCCATTGATTTCATC	NA	False	NA	NA	False	NA	NA	NA	24336151	24339225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_24336200_24339200
ES.34631.1	chr9	-	4948	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-203	-30	-203	3	multi-exon	TRUE	canonical	3	255	junction_7	22.7832137753209	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTTCTGCCTGCTA	NA	False	NA	0	True	AATAAA	-24	NA	24414639	24323068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.10	chr9	-	4489	18	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-76	1	intron_retention	FALSE	canonical	0	0	junction_12	74.1723420971721	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCATGTGTTTTCTGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	24414512	24323072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.11	chr9	-	4755	22	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-29	1	intron_retention	FALSE	non_canonical	0	0	junction_3	67.1377910956064	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCATGTGTTTTCTGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	24414465	24323072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334323_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.12	chr9	-	4804	22	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-70	0	intron_retention	FALSE	canonical	1	8	junction_2	65.1992585130966	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414506	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.13	chr9	-	4706	21	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_15	68.7604537506843	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414460	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.14	chr9	-	4665	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	215	0	intron_retention	FALSE	canonical	0	0	junction_16	88.2906544851803	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414221	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24377898_24378039_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.15	chr9	-	4668	22	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	371	0	intron_retention	FALSE	canonical	1	1	junction_21	67.0426134495113	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414065	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24413835
ES.34631.16	chr9	-	3581	22	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.2505999748386	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414520	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336171_24341722_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.17	chr9	-	4766	21	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-86	0	intron_retention	FALSE	canonical	1	4	junction_10	67.9680807438315	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414522	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.19	chr9	-	4645	19	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-156	0	intron_retention	FALSE	canonical	0	0	junction_18	72.1175523574164	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414592	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24414134
ES.34631.2	chr9	-	5432	5	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-439	1	intron_retention	FALSE	canonical	3	277	junction_4	16.0058583025091	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTTTTCTGCCTGC	NA	False	NA	-2	True	AATAAA	-22	NA	24338153	24323070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24336142_24337429
ES.34631.21	chr9	-	3164	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7754758488336	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414197	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324304_24325640_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.25	chr9	-	4718	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-45	0	intron_retention	FALSE	non_canonical	0	0	junction_22	65.7754758488336	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414481	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134_24414239_24414305
ES.34631.26	chr9	-	3473	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	75.5752184010317	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414512	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385110_24386666_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.28	chr9	-	3541	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	77.3328108655287	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414512	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393339_24396309_24396398_24397000_24397026_24414134
ES.34631.29	chr9	-	3664	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.5795050881242	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414519	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325441_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.3	chr9	-	4771	20	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-141	1	intron_retention	FALSE	canonical	2	4	junction_19	69.7563229989795	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTTTTCTGCCTGC	NA	False	NA	-2	True	AATAAA	-22	NA	24414577	24323070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24414134
ES.34631.30	chr9	-	4657	20	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-82	0	intron_retention	FALSE	canonical	0	0	junction_11	70.7168674805409	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414518	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.31	chr9	-	4928	22	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	390	0	intron_retention	FALSE	canonical	0	0	junction_21	67.2439293300595	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414046	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24413556
ES.34631.33	chr9	-	4923	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_11	88.4509599385421	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414460	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24351619_24351779_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.34	chr9	-	5042	22	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	87	junction_1	49.9901124010387	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414451	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.35	chr9	-	4747	21	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_20	68.8936862128889	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414443	24323073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396423_24414134
ES.34631.36	chr9	-	4467	21	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	239	-9	intron_retention	FALSE	canonical	0	0	junction_20	68.8936862128889	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAAAATGTGCCATGTG	NA	False	NA	-14	True	AATAAA	-10	NA	24414197	24323082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24414134
ES.34631.37	chr9	-	4658	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-19	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7754758488336	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAAAAATGTGCCATGT	NA	False	NA	-15	True	AATAAA	-9	NA	24414455	24323083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324768_24324858_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.38	chr9	-	3412	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7754758488336	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAAAAATGTGCCATG	NA	False	NA	-16	True	AATAAA	-8	NA	24414434	24323084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325597_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.40	chr9	-	4781	22	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-113	0	intron_retention	FALSE	canonical	0	0	junction_1	67.1208001595553	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414549	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332423_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.41	chr9	-	4685	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7754758488336	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414454	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324776_24324823_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.42	chr9	-	6938	20	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-32	0	intron_retention	FALSE	canonical	3	255	junction_5	23.6230790011769	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414468	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.43	chr9	-	3717	24	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	107.765831691456	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414496	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24374121_24374314_24385069_24385164_24386628_24386750_24393224_24393363_24396308_24396398_24397000_24397026_24414134
ES.34631.45	chr9	-	3591	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-172	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.1954693998797	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414608	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325685_24332386_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.46	chr9	-	3430	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	75.5752184010317	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414489	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385108_24386659_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.47	chr9	-	3439	23	NNC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	64.6008085306207	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414518	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325640_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.49	chr9	-	4643	21	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-48	0	intron_retention	FALSE	canonical	0	0	junction_4	68.6901739697899	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414484	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.5	chr9	-	3765	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	-274	-2	-274	0	multi-exon	FALSE	canonical	3	87	junction_1	49.1071732317176	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATGTGTTTTCTGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	24414710	24323071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.50	chr9	-	3139	18	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-141	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	84.4080138539473	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414577	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24414134
ES.34631.51	chr9	-	2916	1	NIC	ENSMUSG00000043067.16	novel	4747	23	NA	NA	9241	0	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24326014	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24323100_24326000
ES.34631.52	chr9	-	4306	19	ISM	ENSMUSG00000043067.16	ENSMUST00000115277.9	4747	23	10122	27	10122	0	3prime_fragment	FALSE	canonical	0	0	junction_18	72.1175523574164	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24389088	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24388944
ES.34631.53	chr9	-	4710	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-72	0	intron_retention	FALSE	non_canonical	0	0	junction_2	88.1306787045557	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414508	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332434_24332475_24332503_24333555_24333641_24334328_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.54	chr9	-	4757	22	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-48	0	intron_retention	FALSE	canonical	0	0	junction_3	67.1377910956064	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414484	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333650_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.56	chr9	-	3460	22	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	79.3164962410955	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414457	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24414134
ES.34631.59	chr9	-	4718	20	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-198	0	intron_retention	TRUE	canonical	0	0	junction_12	70.4558957149594	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414634	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24365118_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.60	chr9	-	3525	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7754758488336	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414437	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324283_24325473_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.61	chr9	-	4751	21	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-36	0	intron_retention	FALSE	non_canonical	0	0	junction_20	68.8936862128889	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414472	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24414109
ES.34631.62	chr9	-	3520	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.5795050881242	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414471	24323098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24324304_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.64	chr9	-	3467	21	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-175	-59	combination_of_known_splicesites	FALSE	canonical	2	4	junction_20	80.4180328035945	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGTGTTGTATTTTTA	NA	False	NA	-14	True	NA	NA	NA	24414611	24323157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24414134
ES.34631.65	chr9	-	3561	16	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-13	-277	intron_retention	FALSE	non_canonical	0	0	junction_4	77.7555714331063	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCTAAATTAGGTTTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	24414449	24323623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334320_24350452_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.66	chr9	-	3521	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-28	1222	-28	-974	multi-exon	FALSE	canonical	3	255	junction_7	22.7832137753209	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTTTTATACAGTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	24414464	24324320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.67	chr9	-	3470	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-207	1452	-207	-1204	multi-exon	FALSE	canonical	3	255	junction_7	22.7832137753209	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATTCAGTG	NA	False	NA	NA	False	NA	NA	NA	24414643	24324550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.68	chr9	-	3219	23	NNC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-82	-1290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	65.7754758488336	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGATGAATAGAGTCT	NA	False	NA	NA	False	AATAAA	-29	NA	24414518	24324636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_24325720_24332376_24332445_24332484_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.69	chr9	-	3193	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-171	1693	-171	-1445	multi-exon	FALSE	canonical	3	255	junction_7	22.7832137753209	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGATGCATCTATAGC	NA	False	NA	NA	False	NA	NA	NA	24414607	24324791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.7	chr9	-	3281	20	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	82.4610039625715	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATGTGTTTTCTGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	24414496	24323071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.70	chr9	-	2242	21	ISM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	-29	9159	-29	1327	5prime_fragment	FALSE	canonical	3	255	junction_6	23.2363400732559	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTATGAACAAAACATT	NA	False	NA	NA	False	AATAAA	-9	NA	24414465	24332257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34631.9	chr9	-	7041	20	NIC	ENSMUSG00000043067.16	novel	4715	22	NA	NA	-1	0	intron_retention	FALSE	canonical	3	259	junction_6	21.7654329619735	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCATGTGTTTTCTGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	24414437	24323071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24343728_24345634_24345737_24349924_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ES.34632.1	chr9	+	4955	1	Antisense	novelGene_ENSMUSG00000031965.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGCTGCCTACACAA	NA	False	NA	NA	False	TTTAAA	-19	NA	24655671	24660626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_24655700_24660600
ES.34633.1	chr9	-	177	1	Intergenic	novelGene_28164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATATA	NA	False	NA	NA	False	NA	NA	NA	24733623	24733446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_24733400_24733600
ES.34634.1	chr9	-	401	1	FSM	ENSMUSG00000066809.2	ENSMUST00000086236.2	78	1	-35	-288	-35	288	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAACTCATGGTGAACAG	NA	False	NA	NA	False	NA	NA	NA	25012812	25012411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25012400_25012800
ES.34635.1	chr9	+	2371	4	Intergenic	novelGene_28166	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTTTGACTGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	25062513	25080818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_25062707_25068253_25068368_25069396_25069498_25078855
ES.34636.1	chr9	-	2762	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	36.7145636454183	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	25063122	25019423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_25020302_25020735_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.10	chr9	-	160	1	Intergenic	novelGene_28165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACAAACATT	NA	False	NA	NA	False	NA	NA	NA	25047999	25047839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_25047800_25048000
ES.34636.11	chr9	-	4881	1	FSM	ENSMUSG00000008429.9	ENSMUST00000214190.2	3955	1	-109	-817	13	817	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATGCTTTTGGGGGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	25063103	25058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25058200_25063100
ES.34636.12	chr9	-	1274	1	FSM	ENSMUSG00000008429.9	ENSMUST00000214190.2	3955	1	489	2192	489	-2192	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTTAGGCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	25062505	25061231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25061200_25062500
ES.34636.2	chr9	-	3139	7	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	51	4	intron_retention	FALSE	canonical	3	22	junction_1	39.6554606019846	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	25063065	25019423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.3	chr9	-	2823	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.1502969463831	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	25063099	25019423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062060
ES.34636.4	chr9	-	3198	7	NIC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	21	4	intron_retention	FALSE	canonical	3	81	junction_1	21.8206069780125	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	25063095	25019423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.5	chr9	-	2799	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	-14	-4	-14	4	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTATGGGATATTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	25063130	25019423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.6	chr9	-	3855	6	NIC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	95	1	intron_retention	FALSE	canonical	3	93	junction_4	18.3913022921162	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCCTTATGGGATATT	NA	False	NA	NA	False	AATAAA	-15	NA	25062899	25019426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.8	chr9	-	2442	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	124	215	2	-215	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTAATTTTGACAT	NA	False	NA	NA	False	AATAAA	-7	NA	25062992	25019642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34636.9	chr9	-	2334	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	123	324	1	-324	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCCTGAAAGTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	25062993	25019751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ES.34637.1	chr9	+	4375	13	NNC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-242	1864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	380.283474310064	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCTGGAAGTGCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	25163492	25221731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163737_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.10	chr9	+	4303	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-43	1869	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAAGTGCCTGCACTT	NA	False	NA	NA	False	AATAAA	-24	NA	25163828	25221736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.11	chr9	+	2391	13	NNC	ENSMUSG00000001833.18	novel	4569	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	502.921540987149	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25163858	25219860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217427_25217562_25218808
ES.34637.12	chr9	+	3043	5	NIC	ENSMUSG00000001833.18	novel	1727	7	NA	NA	17	6	intron_retention	FALSE	canonical	0	0	junction_1	598.553882286298	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTGTCTTATAAAGGT	NA	False	NA	NA	False	AATAAA	-21	NA	25163888	25202104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479
ES.34637.13	chr9	+	2337	13	NNC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	498.86172516373	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGAGTGCAGTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	25163912	25219858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163996_25176689_25176786_25188836_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.14	chr9	+	7036	10	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-27	-1	intron_retention	FALSE	canonical	0	0	junction_1	427.667316185529	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAGTGCAGTGTCTTG	NA	False	NA	14	True	AATAAA	-14	NA	25163916	25219859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25212834_25215012_25215149_25217421
ES.34637.16	chr9	+	2398	14	NNC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.885032600051	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAGTGCAGTGTCTTG	NA	False	NA	14	True	AATAAA	-14	NA	25163920	25219859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163996_25175439_25175504_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.18	chr9	+	1659	8	NIC	ENSMUSG00000001833.18	novel	4569	13	NA	NA	-1	-5307	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	479.607535131697	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGCCTTTTCATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	25163942	25210056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107
ES.34637.19	chr9	+	1746	3	NIC	ENSMUSG00000001833.18	novel	1685	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGTGTGGATCTTATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	25163943	25188117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25186526
ES.34637.2	chr9	+	2503	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTTGTATATTCT	NA	False	NA	22	True	AATAAA	-22	NA	25163759	25219867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.20	chr9	+	2347	14	NNC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	437.885032600051	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163943	25219862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163996_25175470_25175504_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.22	chr9	+	1633	2	NIC	ENSMUSG00000001833.18	novel	444	4	NA	NA	1	1195	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTGCTTTGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	25163945	25178272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689
ES.34637.23	chr9	+	7811	10	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	435.151343049777	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163945	25219862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.24	chr9	+	4583	12	NIC	ENSMUSG00000001833.18	novel	4569	13	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	396.954105638764	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25163945	25219860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25217562_25218808
ES.34637.26	chr9	+	2305	13	NNC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	380.283474310064	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25163958	25219860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25163996_25176681_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.27	chr9	+	4449	8	NNC	ENSMUSG00000001833.18	novel	2864	2	NA	NA	-6802	1	intron_retention	TRUE	canonical	0	0	junction_1	450.17470531575	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCAGTGTCTTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	25203829	25219863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25204879_25204980_25205099_25207690_25207784_25209107_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.28	chr9	+	1814	8	ISM	ENSMUSG00000001833.18	ENSMUST00000165594.4	2516	14	41233	3	-5652	-1	3prime_fragment	FALSE	canonical	3	1099	junction_1	98.5269050585076	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAGTGCAGTGTCTTG	NA	False	NA	14	True	AATAAA	-14	NA	25204979	25219859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.29	chr9	+	3819	6	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	-3480	1	intron_retention	FALSE	canonical	3	1157	junction_4	81.3004305031652	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGCAGTGTCTTGTA	NA	False	NA	16	True	AATAAA	-16	NA	25207151	25219861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25207784_25209107_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.3	chr9	+	2494	13	NNC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	380.283474310064	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25163769	25219860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_25164004_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.30	chr9	+	3044	1	FSM	ENSMUSG00000001833.18	ENSMUST00000214360.2	2251	1	252	-1045	252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGTGCAGTGTCTTGT	NA	False	NA	15	True	AATAAA	-15	NA	25216816	25219860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_25216800_25219900
ES.34637.5	chr9	+	1827	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	46	409	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGATGCAAACTATGCT	NA	False	NA	NA	False	AATAAA	-39	NA	25163792	25219224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.7	chr9	+	8498	10	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	56	0	intron_retention	FALSE	canonical	0	0	junction_1	429.708112244108	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163802	25219862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25207784_25209107_25212834_25215012_25215149_25217421_25217562_25218808
ES.34637.9	chr9	+	4024	12	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	-55	0	intron_retention	FALSE	canonical	0	0	junction_1	395.036665313675	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163816	25219862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ES.34638.1	chr9	-	1436	1	Antisense	novelGene_ENSMUSG00000001833.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATATTGTATCTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	25163744	25162308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_25162300_25163700
ES.34639.1	chr9	+	2730	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	-8	1	-8	-1	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGTGTGGAATGGTT	NA	False	NA	14	True	AATAAA	-22	NA	25392834	25515405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
ES.34639.2	chr9	+	3128	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	10	-415	10	415	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTGTCATTATCTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	25392852	25515821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
ES.3464.1	chr10	-	5160	2	Intergenic	novelGene_2666	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGCCTGGAAGTACCT	NA	False	NA	NA	False	AATAAA	-17	NA	83946272	83940121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_83940442_83941432
ES.34640.1	chr9	-	208	1	Intergenic	novelGene_28167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATCAATTTACTCTTCA	NA	False	NA	NA	False	AATAAA	-9	NA	25574982	25574774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_25574800_25575000
ES.34641.1	chr9	-	2520	2	NNC	ENSMUSG00000110866.2	novel	3205	3	NA	NA	1777	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTGTGTTCTATTCG	NA	False	NA	NA	False	NA	NA	NA	25769171	25766606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_25766630_25766674
ES.34641.2	chr9	-	5908	1	Genic_Genomic	ENSMUSG00000110866.2	novel	NA	NA	NA	NA	-1567	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTTGTGTTCTATTC	NA	False	NA	NA	False	NA	NA	NA	25772515	25766607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_25766600_25772500
ES.34641.3	chr9	-	2737	2	NNC	ENSMUSG00000110866.2	novel	3205	3	NA	NA	-3719	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCAAGGTGTTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	25774667	25766612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_25769135_25774452
ES.34642.1	chr9	-	3874	2	Intergenic	novelGene_28168	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGATGCTCACAGTCA	NA	False	NA	NA	False	NA	NA	NA	25799332	25795243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_25797805_25798019
ES.34643.1	chr9	-	173	1	Intergenic	novelGene_28169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACGAG	NA	False	NA	NA	False	NA	NA	NA	25800674	25800501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_25800500_25800700
ES.34644.1	chr9	+	203	1	Antisense	novelGene_ENSMUSG00000036395.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAAAGTCCTAATAGAA	NA	False	NA	NA	False	NA	NA	NA	26714233	26714436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_26714200_26714400
ES.34645.1	chr9	-	3692	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	-1	-3	-1	2	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTGTCTGGGGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	26717765	26674337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
ES.34645.2	chr9	-	3771	20	NIC	ENSMUSG00000036395.16	novel	3701	20	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_18	7.3144640980424	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTTGTGTCTGGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	26717726	26674339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26708064_26708185_26717593
ES.34645.3	chr9	-	4790	15	NIC	ENSMUSG00000036395.16	novel	3688	19	NA	NA	-7	0	intron_retention	FALSE	canonical	3	11	junction_9	5.72543555067193	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTTGTGTCTGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	26717735	26674340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26676988_26677280_26677369_26678372_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
ES.34645.5	chr9	-	4580	5	ISM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	25	24775	-11	-7126	5prime_fragment	FALSE	canonical	3	17	junction_1	5.11737237261468	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCCAGGACAA	NA	False	NA	NA	False	NA	NA	NA	26717739	26699115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
ES.34646.1	chr9	-	211	1	Intergenic	novelGene_28170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGTTGTTATTTATAC	3859	False	NA	NA	False	NA	NA	NA	26876714	26876503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_26876500_26876700
ES.34647.1	chr9	+	836	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-58	-3	-58	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26910947	26918629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ES.34647.10	chr9	+	1484	6	NIC	ENSMUSG00000035443.11	novel	775	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	323	junction_5	118.744094590005	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26911000	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26917744_26918453
ES.34647.11	chr9	+	779	7	NNC	ENSMUSG00000035443.11	novel	775	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	258.400690143557	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTTGGAAGTGTTTTCT	NA	False	NA	31	True	AATAAA	-12	NA	26911007	26918627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26911081_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ES.34647.12	chr9	+	1464	6	NIC	ENSMUSG00000035443.11	novel	918	8	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	72	junction_3	218.930673958676	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26911014	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647
ES.34647.13	chr9	+	766	5	FSM	ENSMUSG00000035443.11	ENSMUST00000214910.2	774	5	9	-1	-1	1	multi-exon	FALSE	canonical	3	72	junction_3	235.013829380315	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATCATTGAGTTTTAG	NA	False	NA	4	True	AATAAA	-18	NA	26911014	26917228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852
ES.34647.14	chr9	+	1415	6	NIC	ENSMUSG00000035443.11	novel	1107	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	72	junction_2	244.943748644459	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTGGAAGTGTTTTC	NA	False	NA	30	True	AATAAA	-11	NA	26911040	26918626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26918248_26918453
ES.34647.15	chr9	+	1045	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213683.2	1107	7	58	4	50	-1	multi-exon	FALSE	canonical	3	218	junction_6	186.06510210736	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26911073	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ES.34647.18	chr9	+	1262	1	NIC	ENSMUSG00000035443.11	novel	1107	7	NA	NA	463	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26917370	26918632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26917400_26918600
ES.34647.2	chr9	+	973	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	-53	-2	-41	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAGTGTTTTCTTCTAA	NA	False	NA	36	True	AATAAA	-17	NA	26910964	26918632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ES.34647.3	chr9	+	724	4	ISM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	-35	1840	-35	-441	5prime_fragment	FALSE	canonical	3	529	junction_1	50.2150929059736	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACAGACTTGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	26910970	26916786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441
ES.34647.4	chr9	+	805	7	NNC	ENSMUSG00000035443.11	novel	775	7	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.016397661076	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910970	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26911062_26911253_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ES.34647.5	chr9	+	970	8	NNC	ENSMUSG00000035443.11	novel	918	8	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.300546454273	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910972	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916829_26916946_26917647_26917744_26918096_26918248_26918453
ES.34647.6	chr9	+	941	8	NIC	ENSMUSG00000035443.11	novel	918	8	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	221.643121863476	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910978	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ES.34647.7	chr9	+	1305	7	NIC	ENSMUSG00000035443.11	novel	918	8	NA	NA	-23	0	intron_retention	FALSE	canonical	3	218	junction_6	149.601043519831	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGAAGTGTTTTCTTC	NA	False	NA	33	True	AATAAA	-14	NA	26910982	26918629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26918248_26918453
ES.34647.8	chr9	+	809	7	NNC	ENSMUSG00000035443.11	novel	775	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	220.761560663687	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910992	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26911081_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ES.34647.9	chr9	+	771	7	NIC	ENSMUSG00000035443.11	novel	775	7	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	210.647744403357	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGAAGTGTTTTCTT	NA	False	NA	32	True	AATAAA	-13	NA	26910997	26918628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26911062_26911246_26911353_26914892_26915061_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ES.34648.1	chr9	+	4925	4	Antisense	novelGene_ENSMUSG00000031988.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTTGGCTGCCCTAT	NA	False	NA	NA	False	NA	NA	NA	26919316	26929037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_26921333_26921658_26921805_26924023_26924193_26926443
ES.34648.2	chr9	+	4818	1	Antisense	novelGene_ENSMUSG00000031988.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTTGGCTGCCCTAT	NA	False	NA	NA	False	NA	NA	NA	26924219	26929037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_26924200_26929000
ES.34649.1	chr9	+	7315	35	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	-10	17	intron_retention	FALSE	canonical	3	41	junction_24	41.1214338069467	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGGCTTTGGAGCAA	NA	False	NA	NA	False	AATAAA	-36	NA	26941460	27006628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.11	chr9	+	5522	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	79	0	intron_retention	FALSE	canonical	3	212	junction_3	21.3628411629353	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942023	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.13	chr9	+	5174	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	80	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	68.7857721406076	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942024	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963603_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26985660_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.15	chr9	+	6718	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	80	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	56.6582741936434	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCATTTATTATAATT	NA	False	NA	NA	False	AATAAA	-18	NA	26942024	27006610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978253_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.17	chr9	+	4932	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	80	-22	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_23	44.6076226669837	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAATGTCAAATATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	26942024	27006585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26983202_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.18	chr9	+	5319	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	80	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.8123785865164	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGGCTTTGGAGCAA	NA	False	NA	NA	False	AATAAA	-36	NA	26942024	27006628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963389_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.19	chr9	+	6585	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	58.7525979731539	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942025	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.2	chr9	+	5258	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.1376140024679	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26941466	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26941796_26941918_26942049_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.20	chr9	+	4886	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	59.2587210523586	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTAGCATTTATTATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	26942025	27006609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978250_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.21	chr9	+	6616	36	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_23	55.7418246957181	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942025	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26983202_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.22	chr9	+	5056	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	45.3547722221356	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978253_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.23	chr9	+	6622	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	58.9305048995297	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942025	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.27	chr9	+	6074	24	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	81	19562	81	-11667	5prime_fragment	FALSE	canonical	3	212	junction_3	22.2980328376967	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGATGAATTAACAGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	26942025	26987046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018
ES.34649.28	chr9	+	5025	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	47.1984051252453	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998723_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.3	chr9	+	5520	36	FSM	ENSMUSG00000035024.17	ENSMUST00000073127.14	5499	36	-3	-18	-3	14	multi-exon	FALSE	canonical	1	2	junction_1	46.2265053396681	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCTGGCTTTGGAG	NA	False	NA	NA	False	AATAAA	-33	NA	26941467	27006625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_26941796_26941918_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.30	chr9	+	6728	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.763546513529	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956821_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962664_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.31	chr9	+	5385	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	intron_retention	FALSE	canonical	3	212	junction_3	21.9103273049012	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.32	chr9	+	5163	24	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	81	20473	81	-12578	5prime_fragment	FALSE	canonical	3	212	junction_3	22.2980328376967	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATAGTATTTTCTTTTC	NA	False	NA	NA	False	TATAAA	-23	NA	26942025	26986135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018
ES.34649.33	chr9	+	6851	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	82	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	61.4864444991159	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942026	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26985924_26986058_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.34	chr9	+	5185	36	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	82	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	57.2503702866557	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATTATAATTTTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	26942026	27006615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26985649_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.37	chr9	+	5638	33	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	83	-10	intron_retention	FALSE	canonical	3	212	junction_3	21.6401455271793	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942027	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.38	chr9	+	6945	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	85	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.6628729809331	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942029	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963389_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.4	chr9	+	7148	36	NIC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	-1	-10	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	57.0155295708538	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26941473	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26941796_26941918_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.44	chr9	+	6849	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	57.9548505811408	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942037	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975520_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.47	chr9	+	4824	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	59.1976704512197	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26942045	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969325_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.48	chr9	+	5088	34	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	104	32	104	-31	intron_retention	FALSE	canonical	3	212	junction_3	21.7396735668967	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACAAAGTAATAAATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	26942048	27006576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856
ES.34649.49	chr9	+	5009	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	111	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	61.7980302258283	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26942055	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955795_26955984_26956367_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.5	chr9	+	5355	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4181688259705	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCATTTATTATAATT	NA	False	NA	NA	False	AATAAA	-18	NA	26941476	27006610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26941796_26941888_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.50	chr9	+	6543	34	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	112	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	70.7655241788321	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942056	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26952688_26952852_26955795_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.52	chr9	+	4976	34	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	6335	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.8414507275176	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTATTATAATTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	26948279	27006614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26948436_26952686_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.54	chr9	+	4212	32	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	13976	308	13976	-307	3prime_fragment	FALSE	canonical	3	212	junction_1	21.3269479691169	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAGATATGATGTATTTA	NA	False	NA	NA	False	NA	NA	NA	26955920	27006300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.55	chr9	+	5069	27	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	17573	1	intron_retention	FALSE	canonical	3	213	junction_15	20.908259742116	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTAGCATTTATTATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	26959517	27006609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26959585_26961592_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.56	chr9	+	4439	24	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	20736	0	intron_retention	FALSE	canonical	0	0	junction_18	54.7742229606699	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26962680	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26962784_26962914_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998681_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856
ES.34649.57	chr9	+	1722	11	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	-10565	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	72.0780826604038	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26975063	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994206_27005884_27005918_27005992
ES.34649.58	chr9	+	3392	16	ISM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	35483	11	-8201	-10	3prime_fragment	FALSE	canonical	3	213	junction_4	18.8333038347852	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	False	NA	NA	False	AATAAA	-5	NA	26977427	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.59	chr9	+	4704	11	ISM	ENSMUSG00000035024.17	ENSMUST00000214432.2	2077	12	5311	3	5284	0	3prime_fragment	FALSE	canonical	3	238	junction_4	16.3734541255045	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26990939	27006608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.6	chr9	+	5552	37	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	68.2819364071214	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26941476	27006611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26941796_26941918_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26985705_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.60	chr9	+	3977	1	Intergenic	novelGene_28171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAGCCTAAGGTTCTGG	1650	False	NA	NA	False	NA	NA	NA	27001366	27005343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_27001400_27005300
ES.34649.61	chr9	+	4056	3	ISM	ENSMUSG00000035024.17	ENSMUST00000214432.2	2077	12	16750	14	16723	-10	3prime_fragment	FALSE	canonical	3	256	junction_1	4	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	2662	False	NA	NA	False	AATAAA	-5	NA	27002378	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_27005769_27005856_27005918_27005992
ES.34649.62	chr9	+	1911	2	ISM	ENSMUSG00000035024.17	ENSMUST00000214432.2	2077	12	18970	14	18943	-10	intron_retention	FALSE	canonical	3	256	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	4882	False	NA	NA	False	AATAAA	-5	NA	27004598	27006597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_27005769_27005856
ES.34649.7	chr9	+	5520	36	NNC	ENSMUSG00000035024.17	novel	5499	36	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.5225510382013	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCTAGCATTTATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	26941478	27006606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26941796_26941888_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.34649.8	chr9	+	4188	23	NNC	ENSMUSG00000035024.17	novel	4675	30	NA	NA	70	-14009	intron_retention	FALSE	canonical	1	3	junction_9	54.3596266383836	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAAGCAAATCTTCA	NA	False	NA	NA	False	NA	NA	NA	26942014	26984704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962664_26962784_26962914_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018
ES.34649.9	chr9	+	4936	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	77	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	47.7741088133617	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCTAGCATTTATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	26942021	27006606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ES.3465.1	chr10	-	3701	1	Genic_Genomic	ENSMUSG00000020032.15	novel	NA	NA	NA	NA	17788	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTCGTTGGTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	84210464	84206763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_84206800_84210500
ES.3465.2	chr10	-	1531	1	ISM	ENSMUSG00000020032.15	ENSMUST00000020220.15	5558	7	67888	274	19679	-274	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAATTTGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84208573	84207042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_84207000_84208600
ES.34650.1	chr9	+	171	1	Intergenic	novelGene_28172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATCCTGCAAAC	NA	False	NA	NA	False	NA	NA	NA	27027141	27027312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_27027100_27027300
ES.34651.1	chr9	-	3521	9	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	4	11	intron_retention	FALSE	canonical	1	2	junction_4	112.873754145948	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTATGTGTGTTCTGCC	9235	False	NA	NA	False	AGTAAA	-45	NA	26910858	26885419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890667_26896758_26896897_26901415_26901493_26902535_26902706_26903455_26903585_26910689
ES.34651.11	chr9	-	2100	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-10	769	7	463	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACAAAGCATTATTTGT	9238	False	NA	54	True	AAAAAG	-21	NA	26910855	26886208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.12	chr9	-	8835	9	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	7	412	intron_retention	FALSE	canonical	3	181	junction_8	25.4506262201935	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTAAGGCAGTTTGT	9255	False	NA	3	True	ATTAAA	-31	NA	26910838	26886259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.13	chr9	-	2690	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-4	407	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTTCTCCTAAGGCAG	9244	False	NA	-2	True	ATTAAA	-26	NA	26910849	26886264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.14	chr9	-	2510	9	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	0	398	intron_retention	FALSE	non_canonical	0	0	junction_4	82.9061969939522	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAATTAGAAATTTCTC	9292	False	NA	-11	True	ATTAAA	-17	NA	26910801	26886273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890613_26901405_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.16	chr9	-	1865	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	1	393	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	75.0497777198738	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGAACAATTAGAAAT	9293	False	NA	-16	True	ATTAAA	-12	NA	26910800	26886278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26902535_26902706_26903455_26903557_26910689
ES.34651.17	chr9	-	1868	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	7	220	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGATTTTTTATTT	9255	False	NA	-14	True	AATAAA	-25	NA	26910838	26886451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
ES.34651.18	chr9	-	1861	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-14	1012	3	220	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGATTTTTTATTT	9234	False	NA	-14	True	AATAAA	-25	NA	26910859	26886451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.19	chr9	-	1958	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	2	220	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	74.7347977852352	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGATTTTTTATTT	9233	False	NA	-14	True	AATAAA	-25	NA	26910860	26886451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26889051_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.2	chr9	-	2884	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCATGTTACGTGT	9257	False	NA	NA	False	AGTAAA	-31	NA	26910836	26885433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
ES.34651.21	chr9	-	3072	9	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-4	214	intron_retention	FALSE	canonical	3	47	junction_8	67.4944442158019	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAATATTTGGATTTT	9244	False	NA	-20	True	AATAAA	-19	NA	26910849	26886457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26902706_26903455_26903585_26910689
ES.34651.22	chr9	-	1769	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	6	207	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	74.5852532341347	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTTTTGGAATATTT	9298	False	NA	-27	True	AATAAA	-12	NA	26910795	26886464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26888955_26889606_26889745_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.23	chr9	-	2565	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-62	207	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTTTTGGAATATTT	9953	False	NA	-27	True	AATAAA	-12	NA	26910924	26886464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.24	chr9	-	2384	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-4	206	intron_retention	FALSE	canonical	3	181	junction_9	24.3584345419268	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGTTTTGGAATATT	9244	False	NA	-28	True	AATAAA	-11	NA	26910849	26886465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26902706_26903455_26903557_26910689
ES.34651.25	chr9	-	2497	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	16	206	intron_retention	FALSE	canonical	3	47	junction_9	64.4739396104262	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGTTTTGGAATATT	9264	False	NA	-28	True	AATAAA	-11	NA	26910829	26886465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
ES.34651.26	chr9	-	2361	9	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	14	206	intron_retention	FALSE	canonical	3	9	junction_6	79.2976000582615	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGTTTTGGAATATT	9262	False	NA	-28	True	AATAAA	-11	NA	26910831	26886465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26902535_26902706_26903455_26903557_26910689
ES.34651.27	chr9	-	4812	1	Genic_Genomic	ENSMUSG00000031969.17	novel	NA	NA	NA	NA	-7	-3739	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAACATAAAAAA	9224	False	NA	NA	False	NA	NA	NA	26910869	26906057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_26906100_26910900
ES.34651.28	chr9	-	1738	1	Antisense	novelGene_ENSMUSG00000035443.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGGTGATAGTGCTG	8530	False	NA	NA	False	NA	NA	NA	26915660	26913922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_26913900_26915700
ES.34651.29	chr9	-	6910	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-67	-3268	-67	3268	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGGCCACTTTCT	NA	False	NA	NA	False	NA	NA	NA	26941428	26915798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.3	chr9	-	3522	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCATGTTACGTGT	9243	False	NA	NA	False	AGTAAA	-31	NA	26910850	26885433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.30	chr9	-	9038	5	NIC	ENSMUSG00000031988.11	novel	3575	6	NA	NA	-15	3265	intron_retention	FALSE	canonical	3	156	junction_2	10.1087833095779	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTGGCCACTT	NA	False	NA	NA	False	NA	NA	NA	26941341	26915801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26921334_26921659_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.31	chr9	-	9136	5	NIC	ENSMUSG00000031988.11	novel	3575	6	NA	NA	-42	3263	intron_retention	FALSE	canonical	3	169	junction_3	8.40758586040012	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTGTGTGTGGCCAC	NA	False	NA	NA	False	NA	NA	NA	26941403	26915803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26921334_26921659_26921803_26924020_26926618_26930613_26930771_26940694
ES.34651.32	chr9	-	6481	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-17	-2889	-17	2889	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAAAATATCATAATTC	NA	False	NA	NA	False	AATAAA	-26	NA	26941378	26916177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.33	chr9	-	5114	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-36	-1503	-36	1503	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGCATTGTAGCTG	NA	False	NA	NA	False	NA	NA	NA	26941397	26917563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.34	chr9	-	2926	2	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	19660	-617	19625	617	3prime_fragment	FALSE	canonical	3	183	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGAGGGGTTGAGGGT	2489	False	NA	NA	False	AATAAA	-16	NA	26921701	26918449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_26921334_26921659
ES.34651.35	chr9	-	4124	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-545	-4	-545	4	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTTTCCTTCTT	NA	False	NA	1	True	NA	NA	NA	26941906	26919062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.36	chr9	-	3497	7	NNC	ENSMUSG00000031988.11	novel	3575	6	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	66.3209787489767	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGGTCTTTCCTTC	NA	False	NA	-1	True	ATTAAA	-44	NA	26941389	26919064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694_26940997_26941104
ES.34651.38	chr9	-	3550	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-356	381	-356	-381	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCGACAACACAAAATTATT	NA	False	NA	1	True	ATTAAA	-29	NA	26941717	26919447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.39	chr9	-	3407	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-527	695	-527	-695	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGGGACTCTTGCAA	NA	False	NA	-5	True	AGTAAA	-34	NA	26941888	26919761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.4	chr9	-	2879	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	-14	-6	3	-3	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCATGTTACGTGT	9234	False	NA	NA	False	AGTAAA	-31	NA	26910859	26885433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.41	chr9	-	1636	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	-40	1979	-40	1451	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTTTCTCTGAAGAA	NA	False	NA	-3	True	NA	NA	NA	26941401	26921045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.5	chr9	-	2996	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	90.3518123780591	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCATGTTACGTGT	9241	False	NA	NA	False	AGTAAA	-31	NA	26910852	26885433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26889051_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
ES.34651.6	chr9	-	4053	16	Fusion	ENSMUSG00000031969.17_ENSMUSG00000031988.11	novel	2859	11	NA	NA	15	-5	multi-exon	FALSE	canonical	0	0	junction_10	65.3258499115524	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAAAAATTTATTTTC	NA	False	NA	NA	False	AGTAAA	-20	NA	26941311	26885444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26921236_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ES.34651.7	chr9	-	2905	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	74.7347977852352	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCATTTTGAAAAAATTTA	9288	False	NA	NA	False	AGTAAA	-15	NA	26910805	26885449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26889051_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ES.34651.8	chr9	-	2921	11	NNC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	89.8634519701975	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCATTTTGAAAAAATTTA	9255	False	NA	NA	False	AGTAAA	-15	NA	26910838	26885449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902484_26902706_26903455_26903585_26910689
ES.34651.9	chr9	-	2555	9	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	-1	-12	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	96.6442412924847	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATCATTTTGAAAAAATT	9288	False	NA	NA	False	AGTAAA	-13	NA	26910805	26885451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26903455_26903585_26910689
ES.34652.1	chr9	-	4981	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-11	-3028	-11	3028	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGGCTCTCTCTGGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	27066700	27005651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.10	chr9	-	4107	7	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5161	-1	intron_retention	FALSE	canonical	3	74	junction_6	54.0732527842247	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27032685	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.11	chr9	-	4262	6	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4315	-1	intron_retention	FALSE	canonical	3	52	junction_5	65.3740009483893	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27033531	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.12	chr9	-	2987	8	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	8	-1	intron_retention	FALSE	canonical	2	9	junction_3	79.0114949012523	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27066706	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011404_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.13	chr9	-	1994	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4316	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	79.6441303549734	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27033530	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011404_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.14	chr9	-	4151	7	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4348	-1	intron_retention	FALSE	canonical	3	52	junction_6	62.0709719237226	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27033498	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.15	chr9	-	4147	6	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5199	-1	intron_retention	FALSE	canonical	3	74	junction_5	56.7718239974726	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27032647	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.16	chr9	-	4090	7	NIC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	13	-2	intron_retention	FALSE	canonical	3	88	junction_6	49.0184205738573	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCATGTTTGTATTTTTT	NA	False	NA	-3	True	ATTAAA	-12	NA	27066676	27008681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_27009698_27010007_27010063_27010140_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.17	chr9	-	4187	6	NIC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	88	junction_5	51.3326406879677	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCATGTTTGTATTTTTT	NA	False	NA	-3	True	ATTAAA	-12	NA	27066695	27008681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_27009698_27010007_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.18	chr9	-	3109	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5128	-2	intron_retention	FALSE	canonical	1	2	junction_4	91.9951595194008	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCATGTTTGTATTTTTT	NA	False	NA	-3	True	ATTAAA	-12	NA	27032718	27008681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27012737_27012854_27012933_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.19	chr9	-	2131	10	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5186	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.8469634571549	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCATGTTTGTATTTTTT	NA	False	NA	-3	True	ATTAAA	-12	NA	27032660	27008681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27030934_27031148_27032579
ES.34652.2	chr9	-	4083	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5166	2143	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAGAAAAATATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	27032680	27006536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.20	chr9	-	1830	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-1	113	-1	-113	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGCTGGCTGAATATT	NA	False	NA	NA	False	AGTAAA	-21	NA	27066690	27008792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.21	chr9	-	2748	8	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5204	-209	intron_retention	FALSE	canonical	3	74	junction_7	50.13084919305	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTATAATGAGTTCA	NA	False	NA	NA	False	TATAAA	-36	NA	27032642	27008888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.22	chr9	-	1801	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4318	-218	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACGTATTTTTTTATA	NA	False	NA	NA	False	TATAAA	-27	NA	27033528	27008897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.23	chr9	-	1703	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	13	226	13	-226	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTTTCAAAACGTATT	NA	False	NA	NA	False	TATAAA	-19	NA	27066676	27008905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.24	chr9	-	1664	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5215	-227	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27032631	27008906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.25	chr9	-	3882	7	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5160	-227	intron_retention	FALSE	canonical	3	74	junction_6	54.0732527842247	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27032686	27008906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.26	chr9	-	4326	6	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4370	-227	intron_retention	FALSE	canonical	3	52	junction_5	66.5804776191941	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27033476	27008906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.27	chr9	-	8166	3	FSM	ENSMUSG00000031990.16	ENSMUST00000213682.2	597	3	41	-7610	13	-227	multi-exon	FALSE	canonical	3	88	junction_2	57	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGTTTCAAAACGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	27066676	27008906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_27016917_27017644_27017711_27066586
ES.34652.29	chr9	-	1819	1	Intergenic	novelGene_28173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCTATATTTTTATTCC	NA	False	NA	NA	False	NA	NA	NA	27037380	27035561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27035600_27037400
ES.34652.3	chr9	-	3052	8	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4341	1	intron_retention	FALSE	canonical	3	52	junction_7	57.4822066524299	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTGTATTTTTTTTT	NA	False	NA	0	True	ATTAAA	-15	NA	27033505	27008678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.30	chr9	-	197	1	Intergenic	novelGene_28174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCCTTTTCCATCC	NA	False	NA	NA	False	NA	NA	NA	27050648	27050451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27050500_27050600
ES.34652.31	chr9	-	482	1	Intergenic	novelGene_28175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	TATAAA	-17	NA	27052304	27051822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27051800_27052300
ES.34652.32	chr9	-	181	1	Intergenic	novelGene_28176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	27056860	27056679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27056700_27056900
ES.34652.4	chr9	-	1971	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5136	1	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTGTATTTTTTTTT	NA	False	NA	0	True	ATTAAA	-15	NA	27032710	27008678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.5	chr9	-	1966	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	-24	0	1	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066713	27008679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ES.34652.6	chr9	-	2020	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4316	-1	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27033530	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34652.7	chr9	-	1960	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5204	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	78.1136991826658	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27032642	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011319_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.8	chr9	-	3058	8	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5161	-1	intron_retention	FALSE	canonical	1	1	junction_3	83.3661704011102	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27032685	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011319_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
ES.34652.9	chr9	-	2125	10	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4337	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	98.2366756585566	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGTTTGTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-13	NA	27033509	27008680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011404_27011479_27011611_27011764_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
ES.34653.1	chr9	+	2780	15	NNC	ENSMUSG00000034275.19	novel	2857	15	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.62949432619681	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTATCTTTCTTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	27210522	27241437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234572_27235472_27235585_27238141_27238318_27239775_27240003_27240834
ES.34653.2	chr9	+	9583	21	NNC	ENSMUSG00000034275.19	novel	16144	20	NA	NA	7	-6564	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	7.04183924837822	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTGGACTCTAAGAACT	NA	False	NA	NA	False	AATAAA	-15	NA	27210530	27262278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234656_27235472_27235585_27238141_27238318_27239775_27240003_27240834_27240920_27242946_27243109_27243797_27243844_27244373_27246030_27247412_27247459_27253806_27253929_27257065
ES.34653.3	chr9	+	2839	15	FSM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	19	-1	19	1	multi-exon	FALSE	canonical	2	4	junction_12	6.52311431818907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCCATTTATCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	27210542	27241432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234656_27235472_27235585_27238141_27238318_27239775_27240003_27240834
ES.34653.4	chr9	+	6053	21	NNC	ENSMUSG00000034275.19	novel	16144	20	NA	NA	21	-10088	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.66338697965854	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATGGTGTTACTCAGTA	NA	False	NA	NA	False	TATAAA	-28	NA	27210544	27258754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234508_27234656_27235472_27235597_27238141_27238318_27239775_27240003_27240834_27240920_27242946_27243109_27243797_27243844_27244373_27246030_27247412_27247459_27253806_27253929_27257065
ES.34653.6	chr9	+	3555	12	NIC	ENSMUSG00000034275.19	novel	16144	20	NA	NA	-4222	-11116	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	3.35994883865024	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGTGTAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	27234013	27257726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_27234054_27234139_27234257_27234504_27234656_27235472_27235585_27238141_27238318_27239775_27240003_27240834_27240920_27242946_27243109_27243797_27243844_27244373_27246030_27253806_27253929_27257065
ES.34653.7	chr9	+	9207	1	Genic_Genomic	ENSMUSG00000034275.19	novel	NA	NA	NA	NA	21403	3	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTATGTTTTTTTTT	NA	False	NA	13	True	AATAAA	-18	NA	27259638	27268845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_27259600_27268800
ES.34653.8	chr9	+	4732	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	52399	1212	24663	-1212	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTTTTCCTTCTAAA	NA	False	NA	6	True	AATAAA	-20	NA	27262898	27267630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_27262900_27267600
ES.34653.9	chr9	+	2347	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	54397	1599	26661	-1599	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGAGGCCAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	27264896	27267243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_27264900_27267200
ES.34654.1	chr9	-	5005	1	Intergenic	novelGene_28177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGAAGAGATCTGAGT	NA	False	NA	NA	False	NA	NA	NA	27252990	27247985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27248000_27253000
ES.34655.1	chr9	-	2757	1	Antisense	novelGene_ENSMUSG00000034275.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAACTGAGGACAGGAA	NA	False	NA	NA	False	NA	NA	NA	27263048	27260291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_27260300_27263000
ES.34656.1	chr9	-	174	1	Intergenic	novelGene_28178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAATAAAAAAT	3833	False	NA	NA	False	NA	NA	NA	27372120	27371946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_27371900_27372100
ES.34657.1	chr9	+	156	1	Intergenic	novelGene_28179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	563	False	NA	NA	False	NA	NA	NA	27397810	27397966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_27397800_27398000
ES.34658.1	chr9	+	177	1	Intergenic	novelGene_28180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAAAAAAAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	28554713	28554890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_28554700_28554900
ES.34659.1	chr9	-	192	1	Intergenic	novelGene_28181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTGCAACTGGCAG	NA	False	NA	NA	False	NA	NA	NA	29754504	29754312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_29754300_29754500
ES.3466.1	chr10	-	178	1	Intergenic	novelGene_2667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAGGTGTACCTT	NA	False	NA	NA	False	NA	NA	NA	84310796	84310618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84310600_84310800
ES.34660.1	chr9	+	4895	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-117	984	-117	-984	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30338286	30377038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.10	chr9	+	5779	10	FSM	ENSMUSG00000031993.8	ENSMUST00000216552.2	4588	10	-2189	998	-52	-991	multi-exon	FALSE	canonical	3	26	junction_8	7.64166616179973	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTTGTGAAATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	30338351	30377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30340553_30343530_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.11	chr9	+	5397	9	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-52	-13285	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	12.8549601321824	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCTACTGATGTCTTT	NA	False	NA	NA	False	AATACA	-27	NA	30338351	30362684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30360387
ES.34660.12	chr9	+	4893	12	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-50	-991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.2635253664273	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTTGTGAAATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	30338353	30377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30360387_30360460_30373526_30373712_30374515_30374604_30375581
ES.34660.13	chr9	+	4495	12	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-44	-991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	12.8564869306645	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTTGTGAAATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	30338359	30377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581_30376352_30376671
ES.34660.14	chr9	+	4789	11	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-27	-984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.4093251135171	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30338376	30377038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347223_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.15	chr9	+	3352	9	NIC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-1026	-984	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	14.396180048888	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30339514	30377038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30374515_30374604_30375581
ES.34660.16	chr9	+	1053	3	ISM	ENSMUSG00000031993.8	ENSMUST00000216545.2	970	6	4315	-523	4315	523	3prime_fragment	FALSE	canonical	2	4	junction_1	21	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTATTTGGTCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	30351467	30376492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30351522_30374515_30374604_30375581
ES.34660.2	chr9	+	4856	11	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-78	-987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.5287628091155	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTGAAATTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	30338325	30377035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30346979_30347114_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.3	chr9	+	4651	10	NIC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-69	-995	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	12.7898493702459	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAAAAAAGGTTGTGAA	NA	False	NA	NA	False	ATTAAA	-8	NA	30338334	30377027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30374515_30374604_30375581
ES.34660.4	chr9	+	2346	1	Genic_Genomic	ENSMUSG00000031993.8	novel	NA	NA	NA	NA	-69	-35289	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCGTTTGGAAGCCAG	NA	False	NA	NA	False	AATAAA	-17	NA	30338334	30340680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_30338300_30340700
ES.34660.5	chr9	+	3493	9	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-69	-13288	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	12.8549601321824	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACAGTCTACTGATGTC	NA	False	NA	NA	False	AATACA	-24	NA	30338334	30362681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30362305
ES.34660.6	chr9	+	4300	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-69	1531	-69	522	multi-exon	FALSE	canonical	3	26	junction_9	7.52927619363243	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTATTTGGTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	30338334	30376491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.7	chr9	+	5452	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-69	379	-69	-379	multi-exon	FALSE	canonical	3	26	junction_9	7.52927619363243	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAAAACCTCTCTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	30338334	30377643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34660.8	chr9	+	3562	10	NNC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-65	-13287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	15.7487996799129	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTCTACTGATGTCT	NA	False	NA	NA	False	AATACA	-25	NA	30338338	30362682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30360387_30360460_30362305
ES.34660.9	chr9	+	5837	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	-59	-16	-59	9	multi-exon	FALSE	canonical	3	26	junction_9	7.52927619363243	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTCCAAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	30338344	30378038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ES.34661.1	chr9	+	177	1	Intergenic	novelGene_28182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	30469890	30470067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30469900_30470100
ES.34662.1	chr9	+	5336	1	Intergenic	novelGene_28183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTATCCATAAGTTCTG	NA	False	NA	NA	False	NA	NA	NA	30602610	30607946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30602600_30607900
ES.34663.1	chr9	+	177	1	Intergenic	novelGene_28184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTCAGA	NA	False	NA	NA	False	NA	NA	NA	30791543	30791720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30791500_30791700
ES.34664.1	chr9	+	3763	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	-127	-5	-127	5	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTAGTCTGGTTCATTA	NA	False	NA	NA	False	ACTAAA	-23	NA	30853730	30874157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
ES.34664.2	chr9	+	3706	10	NNC	ENSMUSG00000031994.14	novel	3631	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.0092556897679	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTCTAGTCTGGTT	NA	False	NA	NA	False	ACTAAA	-18	NA	30853840	30874152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30866321_30866380_30867791_30867976_30870209_30870383_30870497_30870674_30872943
ES.34664.3	chr9	+	180	1	Intergenic	novelGene_28185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAGGAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	30857014	30857194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30857000_30857200
ES.34665.1	chr9	-	6058	8	FSM	ENSMUSG00000033453.9	ENSMUST00000065112.7	5928	8	-128	-2	-128	2	multi-exon	FALSE	canonical	1	3	junction_2	0.989743318610787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTCTGTCTCTGTAT	NA	False	NA	NA	False	AATAAA	-24	NA	30833876	30810448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_30814086_30815776_30815953_30816055_30816238_30817356_30817535_30821893_30822178_30822405_30822574_30822976_30823110_30832576
ES.34665.3	chr9	-	4851	8	NNC	ENSMUSG00000033453.9	novel	5928	8	NA	NA	-22218	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.76126114370542	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGCATCTTGTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	30855966	30810458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_30814086_30815776_30815953_30816055_30816238_30817356_30817535_30821893_30822178_30822405_30822574_30822976_30823110_30855863
ES.34666.1	chr9	-	177	1	Intergenic	novelGene_28186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGAAAACTTC	NA	False	NA	NA	False	NA	NA	NA	30859759	30859582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_30859600_30859800
ES.34667.1	chr9	+	163	1	Intergenic	novelGene_28187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGATCTTTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	30886121	30886284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30886100_30886300
ES.34668.1	chr9	+	10443	1	Intergenic	novelGene_28188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTAACTTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	30909145	30919588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30909100_30919600
ES.34669.1	chr9	+	3836	8	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-20458	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	151.610806787293	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATGAACTTTTGTGTAA	NA	False	NA	31	True	ATTAAA	-34	NA	30921481	30981528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30921544_30939115_30939196_30941455_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.10	chr9	+	4739	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-268	4390	-266	1262	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAAAGGCTTTTTTCTGT	NA	False	NA	NA	False	AATAAA	-30	NA	30941673	30982791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.11	chr9	+	3045	7	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-266	-306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	129.556937290135	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAATTAAGATTGTTTA	NA	False	NA	15	True	AATAAA	-28	NA	30941673	30981223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30941845_30941970_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.12	chr9	+	3331	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-265	-311	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	140.661864057036	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTAACCCAATTAAGATT	NA	False	NA	10	True	AATAAA	-23	NA	30941674	30981218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978256_30980040
ES.34669.13	chr9	+	3179	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-264	242	-264	-242	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTATTGCCAAGTT	NA	False	NA	79	True	AATATA	-20	NA	30941675	30981287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ES.34669.14	chr9	+	9344	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-264	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGTTGTTGTCATTG	NA	False	NA	83	True	ATTAAA	-28	NA	30941675	30987181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.19	chr9	+	2416	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-247	-349	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	121.155107197344	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCTGACTTAGAAC	NA	False	NA	NA	False	CATAAA	-16	NA	30941692	30980538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978039_30980040
ES.34669.2	chr9	+	2042	1	Intergenic	novelGene_28189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGACAAACAAACAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	30922606	30924648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30922600_30924600
ES.34669.20	chr9	+	9054	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-245	-3	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	121.155107197344	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGCTGTTGTTGTCA	NA	False	NA	80	True	ATTAAA	-25	NA	30941694	30987178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978039_30980040
ES.34669.21	chr9	+	8024	5	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-245	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	126.824682140347	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATAAGTCTGCTGTT	NA	False	NA	73	True	ATTAAA	-18	NA	30941694	30987171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.23	chr9	+	4448	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-233	4646	-231	1006	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGAAGAATTCTTTTT	NA	False	NA	102	True	NA	NA	NA	30941708	30982535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.24	chr9	+	2598	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-226	-213	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.461919056006	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCTAAGTAAATGTGTA	NA	False	NA	NA	False	ATTAAA	-10	NA	30941713	30980674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964519_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.25	chr9	+	7982	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-226	-1056	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	121.155107197344	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGTATTTGCTGCTATA	NA	False	NA	13	True	AATAAA	-20	NA	30941713	30986125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978039_30980040
ES.34669.26	chr9	+	2589	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-228	6500	-226	-206	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATGTGTACTCCTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	30941713	30980681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.27	chr9	+	3350	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-226	-304	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTAAGATTGTTTACA	NA	False	NA	17	True	AATAAA	-30	NA	30941713	30981225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.29	chr9	+	3698	6	NIC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-220	104	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	133.52992174041	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTGTTTGAC	NA	False	NA	5	True	GATAAA	-19	NA	30941719	30981633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
ES.34669.3	chr9	+	4076	9	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-9020	104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.796455184808	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTGTTTGAC	NA	False	NA	5	True	GATAAA	-19	NA	30932919	30981633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30933045_30935368_30935441_30939115_30939196_30941455_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.30	chr9	+	3134	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-222	5949	-220	-297	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGTTTACAAGGTCAC	NA	False	NA	24	True	AATAAA	-37	NA	30941719	30981232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.31	chr9	+	8028	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-222	1055	-220	-1055	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTATTTGCTGCTATAG	NA	False	NA	14	True	AATAAA	-21	NA	30941719	30986126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.32	chr9	+	2540	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-213	377	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGGAGGGTTCTATGT	NA	False	NA	NA	False	TTTAAA	-42	NA	30941726	30980428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.33	chr9	+	2912	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-211	-85	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCTTTTTTAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	30941728	30980802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.34	chr9	+	3751	5	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-211	1403	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	126.824682140347	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATGCCTAGATGTATAC	NA	False	NA	NA	False	TTTAAA	-25	NA	30941728	30982932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.35	chr9	+	4277	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-213	4797	-211	855	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATCCTATTTTAGTAT	NA	False	NA	-49	True	AATAAA	-17	NA	30941728	30982384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.36	chr9	+	7154	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-211	-2137	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTAAGTGCCTAATTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	30941728	30985044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.37	chr9	+	4615	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-207	-1251	-207	1251	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATAAAATGATACAAAGG	NA	False	NA	NA	False	AATAAA	-19	NA	30941732	30982780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ES.34669.38	chr9	+	4379	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-206	1013	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	121.155107197344	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTCTTTTTAGATTGT	NA	False	NA	109	True	NA	NA	NA	30941733	30982542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975525_30975639_30977954_30978039_30980040
ES.34669.39	chr9	+	3392	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-206	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	141.304776989315	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAAGCCACGAGTA	NA	False	NA	15	True	ATTAAA	-18	NA	30941733	30981512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978031_30980040
ES.34669.4	chr9	+	4109	8	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-9019	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	159.196067021463	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACGAGTAATGAACTTTT	NA	False	NA	25	True	ATTAAA	-28	NA	30932920	30981522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30933045_30939115_30939196_30941455_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.40	chr9	+	9226	6	NIC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-203	-3	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	133.52992174041	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGCTGTTGTTGTCA	NA	False	NA	80	True	ATTAAA	-25	NA	30941736	30987178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
ES.34669.41	chr9	+	3139	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-200	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.461919056006	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTATGAAGCCACG	NA	False	NA	11	True	ATTAAA	-14	NA	30941739	30981508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942004_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.42	chr9	+	3074	5	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-201	7990	-199	-860	5prime_fragment	FALSE	canonical	3	275	junction_4	42.0802804173166	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATTGATGTATAAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	30941740	30979191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954
ES.34669.43	chr9	+	2334	5	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-199	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	126.824682140347	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATGAACTTTTGTGTA	NA	False	NA	30	True	ATTAAA	-33	NA	30941740	30981527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.46	chr9	+	2414	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-196	6643	-194	-349	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCTGACTTAGAAC	NA	False	NA	NA	False	CATAAA	-16	NA	30941745	30980538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.48	chr9	+	3180	6	NNC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	18	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.461919056006	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTATGAAGCCACG	NA	False	NA	11	True	ATTAAA	-14	NA	30941959	30981508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30942255_30964525_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.5	chr9	+	3909	9	NNC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-9006	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	156.810992918226	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTTGTGTAATTTTTT	NA	False	NA	37	True	ATTAAA	-40	NA	30932933	30981534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30933045_30935368_30935441_30939115_30939196_30941455_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ES.34669.50	chr9	+	3033	7	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	44	-316	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	149.496283863141	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATTCTTAACCCAATTA	NA	False	NA	5	True	AATAAA	-18	NA	30941985	30981213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30967711_30967896_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.52	chr9	+	2133	5	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	51	8679	51	-1549	5prime_fragment	FALSE	canonical	3	275	junction_4	42.0802804173166	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTATTTGTCCTCTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	30941992	30978502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954
ES.34669.53	chr9	+	6266	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	53	-2759	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCATCAAAGTTAAGATTT	NA	False	NA	NA	False	AATACA	-13	NA	30941994	30984422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.54	chr9	+	4464	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	218	1256	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATACAAAGGCTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	30942159	30982785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.55	chr9	+	2227	5	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	228	103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	135.234980681775	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTGTTTGTTTGA	NA	False	NA	4	True	GATAAA	-18	NA	30942169	30981632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ES.34669.56	chr9	+	164	1	Intergenic	novelGene_28192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGACACACAATC	NA	False	NA	NA	False	NA	NA	NA	30961115	30961279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_30961100_30961300
ES.34669.57	chr9	+	3094	6	NNC	ENSMUSG00000047412.17	novel	2472	5	NA	NA	-1423	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.461919056006	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCACGAGTAATGAACTT	NA	False	NA	23	True	ATTAAA	-26	NA	30963111	30981520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_30963319_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.59	chr9	+	3751	4	ISM	ENSMUSG00000047412.17	ENSMUST00000214585.2	2350	5	6653	-327	5708	-315	3prime_fragment	FALSE	canonical	3	75	junction_1	91.3710384458153	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTCTTAACCCAATTAA	NA	False	NA	6	True	AATAAA	-19	NA	30971255	30981214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30973422_30975528_30975639_30977954_30978256_30980040
ES.34669.6	chr9	+	4095	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-1063	5829	-1061	-177	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGTTGTGAGTGATCAT	NA	False	NA	NA	False	NA	NA	NA	30940878	30981352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.60	chr9	+	1718	3	ISM	ENSMUSG00000047412.17	ENSMUST00000167346.2	1308	5	10881	-1457	9925	-21	3prime_fragment	FALSE	canonical	3	240	junction_2	17.5	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTATGAAGCCACG	NA	False	NA	11	True	ATTAAA	-14	NA	30975472	30981508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30975639_30977954_30978039_30980040
ES.34669.61	chr9	+	2894	1	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	41030	1316	17424	-1316	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATACTTTTAGAACGAA	NA	False	NA	NA	False	TATAAA	-45	NA	30982971	30985865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30983000_30985900
ES.34669.62	chr9	+	2159	1	ISM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	41466	1615	17860	-1615	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATGATGGCTTCTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	30983407	30985566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_30983400_30985600
ES.34669.7	chr9	+	3791	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-599	5669	-597	-17	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAAGCCACGAGTA	NA	False	NA	15	True	ATTAAA	-18	NA	30941342	30981512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.8	chr9	+	9139	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-278	0	-276	0	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGTTGTTGTCATTG	NA	False	NA	83	True	ATTAAA	-28	NA	30941663	30987181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ES.34669.9	chr9	+	3631	6	NIC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-274	-17	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	133.52992174041	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGAAGCCACGAGTA	NA	False	NA	15	True	ATTAAA	-18	NA	30941665	30981512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
ES.3467.1	chr10	+	193	1	Intergenic	novelGene_2668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGGTGTCCTCCTAT	8848	False	NA	NA	False	NA	NA	NA	84317700	84317893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84317700_84317900
ES.34670.1	chr9	-	173	1	Intergenic	novelGene_28190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGCAATAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	30930032	30929859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_30929900_30930000
ES.34671.1	chr9	-	253	2	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCCTGTGTCTTAG	NA	False	NA	NA	False	AATAAA	-7	NA	30942626	30940275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_30940444_30942541
ES.34671.2	chr9	-	2102	2	Genic_Genomic	ENSMUSG00000111673.2	novel	3062	3	NA	NA	-96	-43013	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGCCTGTGTCTTAG	NA	False	NA	NA	False	AATAAA	-7	NA	30942597	30940275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_30940444_30940663
ES.34672.1	chr9	-	8532	1	Intergenic	novelGene_28191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30961682	30953150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_30953200_30961700
ES.34672.2	chr9	-	1720	2	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	30961682	30956240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_30957451_30961172
ES.34673.1	chr9	-	1873	3	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGGCATTTTAAAACAT	NA	False	NA	NA	False	NA	NA	NA	30975594	30963941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_30965608_30973334_30973420_30975472
ES.34673.2	chr9	-	1526	2	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30974606	30972672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_30972705_30973112
ES.34674.1	chr9	-	3552	1	Antisense	novelGene_ENSMUSG00000047412.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACCCAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	30985504	30981952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_30982000_30985500
ES.34675.1	chr9	-	184	1	Intergenic	novelGene_28193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATTAAAAAAAAAGAT	7783	False	NA	NA	False	NA	NA	NA	30996420	30996236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_30996200_30996400
ES.34676.1	chr9	+	2027	3	Antisense	novelGene_ENSMUSG00000031995.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCAAAATGCCCTTTGG	NA	False	NA	NA	False	NA	NA	NA	31010320	31014838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_31011563_31011673_31011790_31014169
ES.34677.1	chr9	+	4972	1	Intergenic	novelGene_28194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACCGAGCCC	8447	False	NA	NA	False	NA	NA	NA	31027528	31032500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31027500_31032500
ES.34678.1	chr9	-	4047	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	31	-819	-26	819	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTGTGTCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	31043118	30999878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.10	chr9	-	3195	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	148.035462879326	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTTTTCTTGCTAT	NA	False	NA	-3	True	AGTAAA	-21	NA	31043124	31000700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.11	chr9	-	3423	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-3	intron_retention	FALSE	canonical	3	531	junction_11	45.8077070017835	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTTTTCTTGCTAT	NA	False	NA	-3	True	AGTAAA	-21	NA	31043124	31000700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.12	chr9	-	3128	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	143.378341340079	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTTTTCTTGCTAT	NA	False	NA	-3	True	AGTAAA	-21	NA	31043128	31000700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006937_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.13	chr9	-	3069	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	149.85644803378	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043124	31000702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31042841
ES.34678.14	chr9	-	3122	18	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	150.126244452316	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043013	31000702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019375_31019579_31019866_31020027_31042841
ES.34678.15	chr9	-	3264	20	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	221.980096934169	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043113	31000702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31041831_31041930_31042841
ES.34678.16	chr9	-	3037	17	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	23	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.729186302229	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAATTTGTTTTTCTTGCT	NA	False	NA	-5	True	AGTAAA	-19	NA	31043126	31000702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.17	chr9	-	3423	20	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-14	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_19	185.150249685083	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043163	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31041038_31041195_31042841
ES.34678.18	chr9	-	3232	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	27	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	193.44658241208	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043122	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017879_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.19	chr9	-	3324	21	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	216.076143986327	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31041038_31041195_31042841_31042963_31043022
ES.34678.2	chr9	-	3500	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	-151	-90	-151	90	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACAGACCCTGTGCAGAC	NA	False	NA	90	True	ACTAAA	-20	NA	31043300	31000607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.20	chr9	-	3043	18	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	198.540295997936	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043151	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31042841
ES.34678.21	chr9	-	3030	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	150.125783478561	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043084	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.22	chr9	-	3103	18	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10834	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_13	195.047203939728	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31032189	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31031995
ES.34678.23	chr9	-	3108	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-33	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	142.04829860228	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043056	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.25	chr9	-	3069	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	190.411315671634	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006937_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.26	chr9	-	3139	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	14094	-6	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	141.067458252347	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	1368	False	NA	-6	True	AGTAAA	-18	NA	31028929	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31028735
ES.34678.27	chr9	-	3326	20	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	189.215716201424	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31041831_31041930_31042841
ES.34678.28	chr9	-	3446	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	531	junction_11	45.4866039825849	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043108	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.29	chr9	-	4323	2	ISM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	37749	6	8816	-6	intron_retention	FALSE	canonical	3	690	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31005400	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_31001324_31001697
ES.34678.3	chr9	-	8108	15	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	531	junction_8	42.60527178265	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043027	31000697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019579_31019866_31020027_31042841
ES.34678.30	chr9	-	3343	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	intron_retention	FALSE	canonical	3	531	junction_10	46.0779390879001	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.31	chr9	-	3166	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	144.987408989305	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043091	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31006989_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.33	chr9	-	3601	17	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	21	-6	intron_retention	FALSE	canonical	3	531	junction_11	45.8133100201241	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043071	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.34	chr9	-	4309	10	ISM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	28962	6	29	-6	intron_retention	FALSE	canonical	3	541	junction_4	45.3711715726687	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	4548	False	NA	-6	True	AGTAAA	-18	NA	31014187	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681
ES.34678.35	chr9	-	3088	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	14094	-6	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_18	142.806190428466	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	1368	False	NA	-6	True	AGTAAA	-18	NA	31028929	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31028786
ES.34678.37	chr9	-	3350	18	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-14	-6	intron_retention	FALSE	canonical	3	18	junction_12	146.16298908124	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043106	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.38	chr9	-	650	2	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	12732	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	2719	False	NA	-6	True	AGTAAA	-18	NA	31001484	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001454
ES.34678.39	chr9	-	3066	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10304	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	146.072491727588	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31032719	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31032598
ES.34678.4	chr9	-	3333	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	10646	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	138.463894210729	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31032377	31000697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31031995
ES.34678.40	chr9	-	3494	16	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	intron_retention	FALSE	canonical	1	2	junction_15	159.503758228102	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31018171_31019199_31019271_31019450_31019579_31042841
ES.34678.41	chr9	-	3052	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	225	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	146.072491727588	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31042798	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042691
ES.34678.42	chr9	-	3037	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	145.863425466732	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043124	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31006914_31007857_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.43	chr9	-	3259	18	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	-6	intron_retention	FALSE	canonical	3	18	junction_11	146.165687849434	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATTTGTTTTTCTTGC	NA	False	NA	-6	True	AGTAAA	-18	NA	31043092	31000703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.46	chr9	-	3150	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	144.341245185596	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTAATTTGTTTTTCTTG	NA	False	NA	-7	True	AGTAAA	-17	NA	31043092	31000704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008233_31008382_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.47	chr9	-	3090	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_18	143.241238716844	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGTAATTTGTTTTTCT	NA	False	NA	-9	True	AGTAAA	-15	NA	31043066	31000706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042918
ES.34678.48	chr9	-	3222	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	25	12	25	-12	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTAGGTAATTTGTTTT	NA	False	NA	-12	True	AGTAAA	-12	NA	31043124	31000709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.49	chr9	-	3846	9	FSM	ENSMUSG00000031995.10	ENSMUST00000148789.8	2686	9	-3	-1157	-3	1157	multi-exon	FALSE	canonical	3	531	junction_3	25.377155080899	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCCAACAAACAGAAGATGA	NA	False	NA	NA	False	NA	NA	NA	31043095	31009542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.5	chr9	-	3611	17	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	20	-2	intron_retention	FALSE	canonical	3	18	junction_12	150.638005143954	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTCTTGCTATA	NA	False	NA	-2	True	AGTAAA	-22	NA	31043129	31000699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.50	chr9	-	6172	7	NIC	ENSMUSG00000031995.10	novel	2686	9	NA	NA	-26	1157	intron_retention	FALSE	canonical	3	531	junction_2	28.4116564498134	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCCAACAAACAGAAGATGA	NA	False	NA	NA	False	NA	NA	NA	31043118	31009542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31011792_31014171_31014270_31014981_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.51	chr9	-	8549	1	FSM	ENSMUSG00000031995.10	ENSMUST00000217404.2	3550	1	-3257	-1742	-3257	1157	mono-exon	FALSE	NA	NA	NA	NA	NA	625	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGCCAACAAACAGAAGATGA	644	False	NA	NA	False	NA	NA	NA	31018091	31009542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31009500_31018100
ES.34678.52	chr9	-	4552	4	ISM	ENSMUSG00000031995.10	ENSMUST00000148789.8	2686	9	25763	-1129	-2495	1129	intron_retention	FALSE	canonical	3	531	junction_3	37.1573231902766	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1406	False	NA	NA	False	NA	NA	NA	31017329	31009570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_31011567_31011681_31011792_31014171_31014270_31014981
ES.34678.53	chr9	-	3538	10	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	23	1129	intron_retention	FALSE	canonical	3	531	junction_2	24.7655674946756	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31043126	31009570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.6	chr9	-	2994	17	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	153.968746828699	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTTCTTGCTATA	NA	False	NA	-2	True	AGTAAA	-22	NA	31043124	31000699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34678.8	chr9	-	3129	20	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.177876184919	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTTTTCTTGCTAT	NA	False	NA	-3	True	AGTAAA	-21	NA	31043065	31000700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31006914_31006956_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ES.34679.1	chr9	+	258	1	Antisense	novelGene_ENSMUSG00000031996.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	4055	False	NA	NA	False	NA	NA	NA	31075967	31076225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_31076000_31076200
ES.3468.1	chr10	+	2633	2	NNC	ENSMUSG00000111514.2	novel	859	4	NA	NA	-50	0	intron_retention	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTTGTGACCCGTTT	NA	False	NA	NA	False	AATACA	-36	NA	84353858	84359134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84353954_84356596
ES.34680.1	chr9	+	174	1	Intergenic	novelGene_28195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31090686	31090860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31090700_31090900
ES.34681.1	chr9	+	3078	1	Intergenic	novelGene_28196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTGCAAAAGATTAATTT	NA	False	NA	NA	False	NA	NA	NA	31117862	31120940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31117900_31120900
ES.34682.1	chr9	-	3724	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-86	-4	-62	4	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCCTGACCATGGC	8653	False	NA	-5	True	AATAAA	-23	NA	31123173	31060848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.10	chr9	-	3520	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	349.469771378393	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061522_31061657_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.11	chr9	-	3180	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	375.301524610546	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	-9	True	AATAAA	-19	NA	31123111	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061724_31062033_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.13	chr9	-	5091	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_15	518.268014038104	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8719	False	NA	-9	True	AATAAA	-19	NA	31123107	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31105509_31105610_31122918
ES.34682.15	chr9	-	3642	17	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	445.738217560207	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8719	False	NA	-10	True	AATAAA	-18	NA	31123107	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075845_31075970_31078856_31079021_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.16	chr9	-	3496	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.469771378393	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8758	False	NA	-10	True	AATAAA	-18	NA	31123068	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061811_31061928_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.17	chr9	-	3773	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	430.67676685497	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8699	False	NA	-10	True	AATAAA	-18	NA	31123127	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31105509_31105610_31122918
ES.34682.19	chr9	-	3541	17	FSM	ENSMUSG00000031996.18	ENSMUST00000079758.9	3504	17	-38	1	-16	-1	multi-exon	FALSE	canonical	3	24	junction_5	460.436596476648	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8699	False	NA	-10	True	AATAAA	-18	NA	31123127	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.2	chr9	-	3552	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-87	-3	-59	3	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTTCCTGACCATGG	8656	False	NA	-6	True	AATAAA	-22	NA	31123170	31060849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.21	chr9	-	3580	16	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	361.61796907172	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8717	False	NA	-10	True	AATAAA	-18	NA	31123109	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.22	chr9	-	3341	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	375.301524610546	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8717	False	NA	-10	True	AATAAA	-18	NA	31123109	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061837_31061982_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.23	chr9	-	3237	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	343.615400197074	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8699	False	NA	-10	True	AATAAA	-18	NA	31123127	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061693_31062128_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.25	chr9	-	7643	16	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	387.323258618259	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8708	False	NA	-10	True	AATAAA	-18	NA	31123118	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31066252_31066299_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.27	chr9	-	7137	8	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-2089	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	448.048284570003	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	NA	False	NA	-10	True	AATAAA	-18	NA	31074707	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31066252_31066299_31069895_31072522_31072652_31073054_31073214_31074641
ES.34682.28	chr9	-	4952	16	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	5	-1	intron_retention	FALSE	canonical	3	712	junction_10	204.841792610785	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8720	False	NA	-10	True	AATAAA	-18	NA	31123106	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.29	chr9	-	3597	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.469771378393	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8720	False	NA	-10	True	AATAAA	-18	NA	31123106	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061665_31061719_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.3	chr9	-	3613	17	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	360.120097155102	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGTTCCTGACCAT	8729	False	NA	-8	True	AATAAA	-20	NA	31123097	31060851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081764_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.31	chr9	-	7635	16	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	5	-1	intron_retention	TRUE	non_canonical	0	0	junction_4	387.323258618259	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	8720	False	NA	-10	True	AATAAA	-18	NA	31123106	31060853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31066289_31066332_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.32	chr9	-	3579	17	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	360.183628297775	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTGTGTTCCTGAC	8717	False	NA	-11	True	AATAAA	-17	NA	31123109	31060854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063261_31063655_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.34	chr9	-	7497	15	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_10	351.584525500524	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTGTGTTCCTGAC	8720	False	NA	-11	True	AATAAA	-17	NA	31123106	31060854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31080193_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.35	chr9	-	3317	15	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	399.210445243905	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8717	False	NA	-12	True	AATAAA	-16	NA	31123109	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064781_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.36	chr9	-	3444	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.469771378393	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8710	False	NA	-12	True	AATAAA	-16	NA	31123116	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061664_31061879_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.37	chr9	-	3049	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	369.490865922285	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8717	False	NA	-12	True	AATAAA	-16	NA	31123109	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061693_31062128_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.38	chr9	-	3140	14	NIC	ENSMUSG00000031996.18	novel	3462	16	NA	NA	-7506	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	397.873742276239	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	31089376	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200
ES.34682.39	chr9	-	3592	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	349.469771378393	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8715	False	NA	-12	True	AATAAA	-16	NA	31123111	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080085_31080147_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.4	chr9	-	4544	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-6	1	intron_retention	FALSE	canonical	2	30	junction_1	459.565487716386	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGTTCCTGACCAT	8731	False	NA	-8	True	AATAAA	-20	NA	31123095	31060851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061693_31062128_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.40	chr9	-	3570	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	349.469771378393	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8717	False	NA	-12	True	AATAAA	-16	NA	31123109	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061655_31061737_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.41	chr9	-	3178	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	375.301524610546	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8720	False	NA	-12	True	AATAAA	-16	NA	31123106	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31060926_31061229_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.42	chr9	-	3645	17	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	357.909883036219	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8717	False	NA	-12	True	AATAAA	-16	NA	31123109	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081922_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.44	chr9	-	1706	11	NNC	ENSMUSG00000031996.18	novel	3462	16	NA	NA	-3265	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	392.546315738665	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	31075883	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061155_31061839_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838
ES.34682.46	chr9	-	4650	16	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	712	junction_10	179.249348363917	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8699	False	NA	-12	True	AATAAA	-16	NA	31123127	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.47	chr9	-	3507	16	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	370.331599155856	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8723	False	NA	-12	True	AATAAA	-16	NA	31123103	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069884_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.48	chr9	-	3609	18	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_14	497.676275042808	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8698	False	NA	-12	True	AATAAA	-16	NA	31123128	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081831_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.5	chr9	-	3710	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8699	False	NA	-9	True	AATAAA	-19	NA	31123127	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.50	chr9	-	3468	16	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	380.769046361002	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8723	False	NA	-12	True	AATAAA	-16	NA	31123103	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075849_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.51	chr9	-	3509	16	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	386.834676143009	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8671	False	NA	-12	True	AATAAA	-16	NA	31123155	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063672_31064719_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.53	chr9	-	7680	15	NIC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	473	junction_9	238.689491744793	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCTTGTGTTCCTGA	8717	False	NA	-12	True	AATAAA	-16	NA	31123109	31060855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.56	chr9	-	3553	17	NNC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_13	353.489303232785	1314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCACCTTGTGTTCCTG	8717	False	NA	-13	True	AATAAA	-15	NA	31123109	31060856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081831_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.58	chr9	-	3291	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-26	197	2	-195	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTGTTTATTTG	8717	False	NA	NA	False	NA	NA	NA	31123109	31061049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.59	chr9	-	3450	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-19	203	5	-201	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTTTGTTTGTT	8720	False	NA	NA	False	NA	NA	NA	31123106	31061055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.6	chr9	-	3353	17	NNC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	375.301524610546	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8708	False	NA	-9	True	AATAAA	-19	NA	31123118	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_31061534_31061677_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.60	chr9	-	2620	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	-1070	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCAGATATCTGA	8717	False	NA	NA	False	TATAAA	-24	NA	31123109	31061924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.61	chr9	-	2414	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	-24	1072	4	-1070	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCAGATATCTGA	8719	False	NA	NA	False	TATAAA	-24	NA	31123107	31061924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.62	chr9	-	2575	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	-22	1081	2	-1079	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGATCTATTGCA	8717	False	NA	NA	False	TATAAA	-15	NA	31123109	31061933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.63	chr9	-	1151	1	FSM	ENSMUSG00000031996.18	ENSMUST00000213273.2	1155	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	8719	False	NA	NA	False	NA	NA	NA	31123107	31121956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31122000_31123100
ES.34682.7	chr9	-	7356	14	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	-7529	0	intron_retention	FALSE	canonical	3	1130	junction_10	87.072777830119	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	False	NA	-9	True	AATAAA	-19	NA	31089399	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200
ES.34682.8	chr9	-	4993	16	NIC	ENSMUSG00000031996.18	novel	3504	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	36	junction_4	380.145796592132	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34682.9	chr9	-	7851	16	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	712	junction_9	206.079811939183	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8717	False	NA	-9	True	AATAAA	-19	NA	31123109	31060852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ES.34683.1	chr9	-	174	1	Intergenic	novelGene_28197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATATATATATATAAAA	6008	False	NA	NA	False	NA	NA	NA	31125818	31125644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31125600_31125800
ES.34684.1	chr9	+	2511	1	Intergenic	novelGene_28198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCCAACACCAAACACCG	NA	False	NA	NA	False	NA	NA	NA	31161153	31163664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31161200_31163700
ES.34684.2	chr9	+	135	1	Intergenic	novelGene_28199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31163286	31163421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31163300_31163400
ES.34685.1	chr9	-	184	1	Intergenic	novelGene_28200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATTGTTAATGGAAA	5	True	NA	NA	False	NA	NA	NA	31164665	31164481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31164500_31164700
ES.34686.1	chr9	+	7070	22	NIC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	-190	8	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	7.64460000896398	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTGTGCATGT	NA	False	NA	NA	False	AATAAA	-18	NA	31191643	31293027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.10	chr9	+	4749	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTGTGCATGT	NA	False	NA	NA	False	AATAAA	-18	NA	31191844	31293027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
ES.34686.11	chr9	+	3365	19	NIC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	1	-17420	combination_of_known_junctions	FALSE	canonical	3	27	junction_13	7.4236858171067	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACAGATAAGAAGATGG	NA	False	NA	NA	False	NA	NA	NA	31191845	31272419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116
ES.34686.12	chr9	+	4971	21	NNC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	8	-6039	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10.6408411321662	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAACGGGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	31191852	31283800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227540_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119
ES.34686.13	chr9	+	5668	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	10	-1159	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	9.0846360546198	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTCTGTATCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	31191854	31291860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252561_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.14	chr9	+	4659	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	11.423213029545	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTTTCTTTCTTGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	31191855	31293023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227540_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
ES.34686.16	chr9	+	4672	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	50	5	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	9.99954647497652	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31191894	31293024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252561_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
ES.34686.17	chr9	+	6640	21	NIC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	61	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.2351012456497	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31191905	31293024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31191959_31224722_31224918_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.18	chr9	+	5029	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	91	-6039	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	12.795088343356	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAACGGGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	31191935	31283800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31271970_31272037_31272116_31272258_31273626_31273796_31282119
ES.34686.19	chr9	+	5243	17	NIC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	12432	-653	combination_of_known_junctions	FALSE	canonical	3	25	junction_16	8.57959060794861	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATGTTGGTTTTATGC	NA	False	NA	NA	False	AATAAA	-12	NA	31238834	31292366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.2	chr9	+	2463	7	NNC	ENSMUSG00000042496.19	novel	1952	7	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.8735410115487	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTCTATGTCATGAGC	NA	False	NA	NA	False	AATAAA	-11	NA	31191827	31241904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31226950_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
ES.34686.20	chr9	+	5500	13	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	26174	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.9220024425795	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCATGTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	31252576	31293019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31252781_31258088_31258437_31259899_31260087_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.21	chr9	+	2581	9	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	38413	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.8075651058756	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTGTGCATG	NA	False	NA	NA	False	AATAAA	-17	NA	31264815	31293026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31265085_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
ES.34686.22	chr9	+	6504	33	Fusion	ENSMUSG00000042185.15_ENSMUSG00000042496.19	novel	4808	17	NA	NA	-31927	2	multi-exon	FALSE	canonical	0	0	junction_8	20.1089804254219	269	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGCCTTTAATCATTGT	NA	False	NA	8	True	ATTAAA	-16	NA	31265560	31332631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755_31291889_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.23	chr9	+	3944	8	NIC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	39199	-650	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	10.5926428068095	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGGTTTTATGCCAG	NA	False	NA	NA	False	AATAAA	-15	NA	31265601	31292369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.24	chr9	+	4581	8	NIC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	39217	5	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	10.5926428068095	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31265619	31293024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.25	chr9	+	2474	6	ISM	ENSMUSG00000042496.19	ENSMUST00000215847.2	3519	21	43587	6074	42033	-6074	internal_fragment	FALSE	canonical	3	30	junction_4	10.0319489631876	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31268435	31283765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119
ES.34686.26	chr9	+	2880	3	NNC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	45884	3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	14	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGTTTCTTTCTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	31272286	31293022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31273796_31282119_31282224_31291755
ES.34686.27	chr9	+	7887	2	NNC	ENSMUSG00000042496.19	novel	3408	21	NA	NA	49203	5	intron_retention	FALSE	canonical	3	14	junction_1	0	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31275605	31293024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31282224_31291755
ES.34686.28	chr9	+	2867	1	NIC	ENSMUSG00000042496.19	novel	3408	21	NA	NA	51473	-9097	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAAAACAAAAGT	NA	False	NA	NA	False	NA	NA	NA	31277875	31280742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31277900_31280700
ES.34686.29	chr9	+	183	1	Intergenic	novelGene_28202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATATGT	NA	False	NA	NA	False	NA	NA	NA	31295549	31295732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31295500_31295700
ES.34686.3	chr9	+	6810	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.8140330431156	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTTTCTTTCTTGTGC	NA	False	NA	NA	False	AATAAA	-14	NA	31191827	31293023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227537_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.30	chr9	+	5233	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297451	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.31	chr9	+	5189	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	-28	0	-28	0	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297459	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.32	chr9	+	5428	26	FSM	ENSMUSG00000042185.15	ENSMUST00000132329.8	5398	26	-31	1	-26	-1	multi-exon	FALSE	canonical	2	9	junction_5	14.7460638815923	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGGCCTTTAATCAT	NA	False	NA	5	True	ATTAAA	-13	NA	31297461	31332628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.34	chr9	+	5184	26	NNC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.748255619168	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297480	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300189_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314312_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.35	chr9	+	5063	25	NIC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.5763699785769	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297481	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.36	chr9	+	7591	22	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	-2	intron_retention	FALSE	canonical	2	9	junction_5	15.8852175324867	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297488	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31309941_31310444_31311344_31311872_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.37	chr9	+	4994	25	NNC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	21.6107853088838	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297493	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314312_31314388_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.38	chr9	+	5104	25	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	17.0830792664034	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297493	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.39	chr9	+	5389	26	NNC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.2724798355997	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297493	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308097_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.4	chr9	+	4100	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	-652	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGTTGGTTTTATGCC	NA	False	NA	NA	False	AATAAA	-13	NA	31191833	31292367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
ES.34686.42	chr9	+	5289	25	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	48	junction_5	9.32588988902519	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31297498	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109
ES.34686.43	chr9	+	5131	26	NNC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.4878989681117	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTGGGCCTTTAATC	NA	False	NA	3	True	ATTAAA	-11	NA	31297499	31332626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312246_31312300_31313351_31313432_31313530_31313573_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.45	chr9	+	4955	25	NNC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.9652137300454	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTGGGCCTTTAATC	NA	False	NA	3	True	ATTAAA	-11	NA	31297500	31332626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310476_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314388_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.47	chr9	+	5384	26	NNC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	21.4623763828706	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297505	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31302951_31303052_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109
ES.34686.48	chr9	+	8343	23	NIC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	4	0	intron_retention	FALSE	canonical	3	28	junction_5	12.4217384764315	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297512	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31313432_31313530_31313575_31314309_31314371_31314750_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.5	chr9	+	6667	21	NIC	ENSMUSG00000042496.19	novel	3519	21	NA	NA	-5	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	10.831781940198	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTTCTTTCTTGTGCA	NA	False	NA	NA	False	AATAAA	-15	NA	31191839	31293024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.51	chr9	+	5215	25	NNC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	24.5370680468008	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297523	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314388_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322466_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.52	chr9	+	6703	24	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	23	0	intron_retention	FALSE	canonical	2	9	junction_5	14.7817135278836	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297531	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.53	chr9	+	5120	25	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	2419	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	8.9627895893088	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31300170	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.55	chr9	+	2872	6	NIC	ENSMUSG00000042185.15	novel	4808	17	NA	NA	842	0	intron_retention	FALSE	canonical	3	74	junction_3	1.95959179422654	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31321564	31332629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.56	chr9	+	4771	5	ISM	ENSMUSG00000042185.15	ENSMUST00000128375.8	4808	17	12102	-2412	1894	2412	3prime_fragment	FALSE	canonical	3	74	junction_2	2.17944947177034	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTGTATTGTTGCTG	NA	False	NA	NA	False	AATAAA	-44	NA	31322616	31335041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ES.34686.57	chr9	+	6338	3	NNC	ENSMUSG00000042185.15	novel	4808	17	NA	NA	4630	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	38	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31325352	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31329264_31329469_31330379_31331109
ES.34686.58	chr9	+	5721	3	NIC	ENSMUSG00000042185.15	novel	4808	17	NA	NA	5348	-2	intron_retention	FALSE	canonical	3	76	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31326070	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31330379_31331109_31331246_31331350
ES.34686.59	chr9	+	2904	4	NNC	ENSMUSG00000042185.15	novel	5161	26	NA	NA	7958	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.8267435801184	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	False	NA	4	True	ATTAAA	-12	NA	31328680	31332627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31329263_31329469_31330379_31331109_31331246_31331350
ES.34686.6	chr9	+	6841	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	9.0846360546198	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGTTTCTTTCTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	31191843	31293022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252561_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34686.7	chr9	+	4375	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	-6039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	10.7614833461528	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAACGGGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	31191844	31283800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31282902
ES.34686.8	chr9	+	1940	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	11	1	0	-1	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGAGCATTCTTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	31191844	31241913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
ES.34686.9	chr9	+	6513	21	NIC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	11.0854634544524	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCATGTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	31191844	31293019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
ES.34687.1	chr9	-	3831	1	Antisense	novelGene_ENSMUSG00000042496.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACAGATCAACTGAGAT	NA	False	NA	NA	False	NA	NA	NA	31258219	31254388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_31254400_31258200
ES.34688.1	chr9	-	176	1	Intergenic	novelGene_28201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAAGTTCTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	31269560	31269384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31269400_31269600
ES.34689.1	chr9	-	221	1	Intergenic	novelGene_28203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTCCAGGGACCCG	NA	False	NA	NA	False	ATTAAA	-37	NA	31346812	31346591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31346600_31346800
ES.3469.1	chr10	-	6910	2	Antisense	novelGene_ENSMUSG00000111514.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTTTCTGTTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	84361933	84354899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84358167_84358290
ES.34690.1	chr9	-	167	1	Intergenic	novelGene_28204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATGTTTTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	31355243	31355076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31355100_31355200
ES.34691.1	chr9	+	1633	3	Antisense	novelGene_ENSMUSG00000041737.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTGAGTCCAGGGTGT	6607	False	NA	NA	False	NA	NA	NA	31360935	31370380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_31360995_31362056_31362259_31369008
ES.34692.1	chr9	-	179	1	Intergenic	novelGene_28205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTCAGA	NA	False	NA	NA	False	NA	NA	NA	31404866	31404687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31404700_31404900
ES.34693.1	chr9	-	155	1	Intergenic	novelGene_28206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTCTGCTATCCTCC	NA	False	NA	0	True	NA	NA	NA	31501701	31501546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31501500_31501700
ES.34694.1	chr9	+	159	1	Intergenic	novelGene_28207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAATTAATATTTT	NA	False	NA	NA	False	NA	NA	NA	31754612	31754771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31754600_31754800
ES.34695.1	chr9	-	1624	1	FSM	ENSMUSG00000091639.3	ENSMUST00000169182.3	1355	1	-104	-165	-104	165	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTCTCAACAATGTTAAA	NA	False	NA	NA	False	AGTAAA	-27	NA	31848200	31846576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_31846600_31848200
ES.34696.1	chr9	-	177	1	Intergenic	novelGene_28208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAGAGAGAGTGT	NA	False	NA	NA	False	NA	NA	NA	31897591	31897414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31897400_31897600
ES.34697.1	chr9	+	139	1	Intergenic	novelGene_28209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAGCAATCA	5906	False	NA	NA	False	NA	NA	NA	31911931	31912070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_31911900_31912100
ES.34698.1	chr9	-	177	1	Intergenic	novelGene_28210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCACCTACGTGAGATC	NA	False	NA	NA	False	NA	NA	NA	31937202	31937025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31937000_31937200
ES.34699.1	chr9	+	6746	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83843	82	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_1	7.18653313520513	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACTCATTACCGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	31943588	32172596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.10	chr9	+	2809	17	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20293	26	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	8.16600231141285	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAAAGTAATGAA	NA	False	NA	NA	False	NA	NA	NA	32007138	32160786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_32007215_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675
ES.34699.11	chr9	+	8856	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20266	-444	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	8.00340063777314	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCTTACTGAGTTCAG	NA	False	NA	NA	False	AATAAA	-14	NA	32007165	32175097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_32007215_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.12	chr9	+	178	1	Intergenic	novelGene_28213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAAGAC	2133	False	NA	NA	False	NA	NA	NA	32034535	32034713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32034500_32034700
ES.34699.13	chr9	+	4276	21	ISM	ENSMUSG00000041444.15	ENSMUST00000174641.8	13568	22	13433	9177	-1	-1949	3prime_fragment	FALSE	canonical	3	20	junction_18	5.96322060635023	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGCCTAAGCATGCTT	445	False	NA	NA	False	NA	NA	NA	32040864	32170565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.14	chr9	+	8121	3	ISM	ENSMUSG00000041444.15	ENSMUST00000174641.8	13568	22	35841	90358	22407	-3878	internal_fragment	FALSE	canonical	3	39	junction_2	0.5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATGTAAACATTTCAG	NA	False	NA	NA	False	NA	NA	NA	32063272	32089384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_32063310_32064335_32064421_32081385
ES.34699.15	chr9	+	189	1	Intergenic	novelGene_28217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGCATTTACTGCT	9373	False	NA	NA	False	NA	NA	NA	32087608	32087797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32087600_32087800
ES.34699.16	chr9	+	2674	1	Intergenic	novelGene_28218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9711	False	NA	NA	False	NA	NA	NA	32105519	32108193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32105500_32108200
ES.34699.17	chr9	+	177	1	Intergenic	novelGene_28219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGTT	NA	False	NA	NA	False	NA	NA	NA	32106341	32106518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32106300_32106500
ES.34699.18	chr9	+	2440	1	Intergenic	novelGene_28220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	6038	False	NA	NA	False	NA	NA	NA	32122082	32124522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32122100_32124500
ES.34699.19	chr9	+	2509	1	Intergenic	novelGene_28221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTTTTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	32126880	32129389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32126900_32129400
ES.34699.2	chr9	+	7378	21	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83822	81	intron_retention	FALSE	canonical	2	12	junction_1	7.14055319985784	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCACTCATTACCGCC	NA	False	NA	NA	False	AATAAA	-18	NA	31943609	32172595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32168995_32170197
ES.34699.20	chr9	+	4364	2	NIC	ENSMUSG00000041444.15	novel	8703	13	NA	NA	-1200	27	intron_retention	TRUE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAAGTAATGAAT	NA	False	NA	NA	False	NA	NA	NA	32155259	32160787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_32158512_32159675
ES.34699.21	chr9	+	3841	4	NIC	ENSMUSG00000041444.15	novel	8703	13	NA	NA	-1139	-3	intron_retention	FALSE	canonical	3	26	junction_2	4.10960933531265	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	32155320	32160757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_32157826_32158403_32158512_32158781_32158928_32159675
ES.34699.22	chr9	+	6261	10	NIC	ENSMUSG00000041444.15	novel	8703	13	NA	NA	29	461	intron_retention	FALSE	canonical	3	20	junction_8	5.32174667325691	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCCCTGATCCTTGA	NA	False	NA	NA	False	NA	NA	NA	32156488	32172975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32168995_32170197
ES.34699.23	chr9	+	4684	6	ISM	ENSMUSG00000041444.15	ENSMUST00000168954.9	8703	13	24129	2947	3214	80	3prime_fragment	FALSE	canonical	3	20	junction_3	5.5281099844341	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCCACTCATTACCGC	119	False	NA	NA	False	AATAAA	-17	NA	32159673	32172594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.24	chr9	+	5287	1	ISM	ENSMUSG00000041444.15	ENSMUST00000174641.8	13568	22	144343	2681	15315	1520	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTCACTGCAGAAGA	NA	False	NA	NA	False	TATAAA	-21	NA	32171774	32177061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_32171800_32177100
ES.34699.25	chr9	+	2499	1	ISM	ENSMUSG00000041444.15	ENSMUST00000174641.8	13568	22	146130	3682	17102	519	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTATGTGTTTC	NA	False	NA	14	True	NA	NA	NA	32173561	32176060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_32173600_32176100
ES.34699.3	chr9	+	3532	16	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83810	34	intron_retention	FALSE	canonical	2	12	junction_1	7.11492953037641	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAATGAATGCTTAGT	NA	False	NA	NA	False	NA	NA	NA	31943621	32160794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157826_32158403_32158512_32158781_32158928_32159675
ES.34699.4	chr9	+	3095	17	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83763	28	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	7.02423260933178	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAGTAATGAATG	NA	False	NA	NA	False	NA	NA	NA	31943668	32160788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675
ES.34699.5	chr9	+	8122	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83762	-1488	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	7.18653313520513	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAGATAGTCTACGA	NA	False	NA	NA	False	ATTAAA	-19	NA	31943669	32174053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.6	chr9	+	7346	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83749	80	intron_retention	FALSE	canonical	0	0	junction_3	9.45403008284066	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCCACTCATTACCGC	NA	False	NA	NA	False	AATAAA	-17	NA	31943682	32172594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_31944029_32040865_32040975_32063217_32064006_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
ES.34699.7	chr9	+	7056	21	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20317	78	intron_retention	FALSE	canonical	2	6	junction_1	8.0154538237083	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCTCCCACTCATTACC	NA	False	NA	NA	False	AATAAA	-15	NA	32007114	32172592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_32007215_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32168995_32170197
ES.34699.8	chr9	+	3332	15	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20316	-3	intron_retention	FALSE	canonical	0	0	junction_1	12.8597219635415	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	32007115	32160757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_32007140_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150607_32150708_32156447_32156551_32157213_32157826_32158403_32158928_32159675
ES.34699.9	chr9	+	7151	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-20298	89	intron_retention	FALSE	canonical	0	0	junction_1	10.9397442627855	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTACCGCCTTATCCAT	NA	False	NA	NA	False	AATAAA	-26	NA	32007133	32172603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_32007215_32021130_32021234_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32168995_32170197
ES.347.1	chr1	+	1180	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2151	583	-82	9	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGAGAACTCAGCTT	NA	False	NA	NA	False	AATAAA	-35	NA	39026839	39035736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.10	chr1	+	3409	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2210	-1705	-23	1705	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGTTTATTTTTAATA	NA	False	NA	NA	False	ATTAAA	-15	NA	39026898	39038024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.13	chr1	+	5226	3	NIC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	-22	-9	intron_retention	FALSE	canonical	3	825	junction_1	52.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAATAACAGTGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	39026899	39035718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39026931_39030326_39035025_39035221
ES.347.15	chr1	+	960	4	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	9306	583	-246	9	3prime_fragment	FALSE	canonical	3	894	junction_2	62.1038556684598	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGAGAACTCAGCTT	NA	False	NA	NA	False	AATAAA	-35	NA	39033994	39035736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.2	chr1	+	1805	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2158	-49	-75	49	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGCCTTGTTTTCTGT	NA	False	NA	52	True	NA	NA	NA	39026846	39036368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.3	chr1	+	4928	4	NIC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	-67	-6	intron_retention	FALSE	canonical	3	825	junction_1	43.5660418215839	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAACAGTGCAAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	39026854	39035721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39026931_39030326_39034470_39034815_39035025_39035221
ES.347.4	chr1	+	997	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2182	735	-51	-143	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACATATCTATGTTTT	NA	False	NA	NA	False	NA	NA	NA	39026870	39035584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.6	chr1	+	799	5	NIC	ENSMUSG00000026078.11	novel	3914	6	NA	NA	-47	-207	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	413.861314331262	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATTTGTTGGAACTCT	NA	False	NA	NA	False	TTTAAA	-40	NA	39026874	39035520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39026931_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.7	chr1	+	1277	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2189	448	-44	144	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTGCCATGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	39026877	39035871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ES.347.8	chr1	+	1902	3	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2193	601	-40	-9	intron_retention	FALSE	canonical	3	825	junction_1	63.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAATAACAGTGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	39026881	39035718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_39026931_39030326_39030457_39033995
ES.347.9	chr1	+	5438	2	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2205	592	-28	0	intron_retention	FALSE	canonical	3	825	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	39026893	39035727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_39026931_39030326
ES.3470.1	chr10	-	3390	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-232	-69	-232	69	multi-exon	FALSE	canonical	3	271	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTTTCCATCTTAAGA	NA	False	NA	54	True	CATAAA	-22	NA	84370158	84362099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84364642_84369310
ES.3470.2	chr10	-	6380	1	NIC	ENSMUSG00000046841.6	novel	3089	2	NA	NA	1351	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGGGTTCTGAGAAC	NA	False	NA	-16	True	AATAAA	-25	NA	84368549	84362169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84362200_84368500
ES.3470.3	chr10	-	2100	3	NNC	ENSMUSG00000046841.6	novel	2606	3	NA	NA	59	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	135.5	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGGGTTCTGAGAAC	NA	False	NA	-16	True	AATAAA	-25	NA	84369841	84362169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84362309_84363211_84364642_84369310
ES.3470.5	chr10	-	2927	3	NNC	ENSMUSG00000046841.6	novel	2606	3	NA	NA	89	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.5	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGTGGGTTCTGAGA	NA	False	NA	-18	True	AATAAA	-23	NA	84369811	84362171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84362214_84362257_84364642_84369310
ES.3470.6	chr10	-	2955	3	NNC	ENSMUSG00000046841.6	novel	2606	3	NA	NA	14	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	135.5	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCAGTGGGTTCTGAGA	NA	False	NA	-18	True	AATAAA	-23	NA	84369886	84362171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84364642_84369310_84369762_84369852
ES.3470.7	chr10	-	3031	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-12	70	-12	-70	multi-exon	FALSE	canonical	3	271	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACTGTATGGCTTCTT	NA	False	NA	-85	True	AAAAAG	-37	NA	84369938	84362238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84364642_84369310
ES.3470.8	chr10	-	2381	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	-19	727	-19	-396	multi-exon	FALSE	canonical	3	271	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAATTTTATTGGTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	84369945	84362895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84364642_84369310
ES.34700.1	chr9	-	157	1	Intergenic	novelGene_28211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	31987597	31987440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_31987400_31987600
ES.34701.1	chr9	-	177	1	Intergenic	novelGene_28212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32010179	32010002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_32010000_32010200
ES.34702.1	chr9	-	6530	1	Intergenic	novelGene_28214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCACTGTTTCCTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	32047581	32041051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_32041100_32047600
ES.34702.2	chr9	-	3188	1	Intergenic	novelGene_28215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAATTGTGTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	32047619	32044431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_32044400_32047600
ES.34702.3	chr9	-	1773	3	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	11	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTGGTCTCTACCC	NA	False	NA	NA	False	NA	NA	NA	32047582	32045368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32046425_32046767_32046898_32046995
ES.34702.4	chr9	-	1910	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTCATGATTACATCC	NA	False	NA	NA	False	AATATA	-13	NA	32047583	32045575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32046898_32046995
ES.34702.5	chr9	-	1280	1	Intergenic	novelGene_28216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACTGAAAGTAATTCA	NA	False	NA	NA	False	AGTAAA	-18	NA	32047539	32046259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_32046300_32047500
ES.34702.6	chr9	-	928	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAGAATTCAGTAATT	NA	False	NA	NA	False	GATAAA	-15	NA	32047560	32046534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32046898_32046995
ES.34702.7	chr9	-	866	2	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAATAATAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	32047600	32046636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32046898_32046995
ES.34703.1	chr9	-	4090	4	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	32171135	32164770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32164938_32164975_32165433_32166466_32168993_32170195
ES.34703.2	chr9	-	2818	5	Antisense	novelGene_ENSMUSG00000041444.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	32170559	32164770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_32164938_32164975_32165433_32166466_32167352_32168005_32168951_32170195
ES.34704.1	chr9	+	171	1	Intergenic	novelGene_28222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTGGAACAAGTCAAC	9377	False	NA	NA	False	NA	NA	NA	32551011	32551182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_32551000_32551200
ES.34705.1	chr9	+	5114	8	FSM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	-34	0	-34	0	multi-exon	FALSE	canonical	1	1	junction_6	2.24971653543195	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGCTCTGGCTTGAT	NA	False	NA	NA	False	ATTAAA	-24	NA	32607283	32669116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649656_32664094_32664214_32665508
ES.34706.1	chr9	-	2698	2	Intergenic	novelGene_28223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCTACCAGAAAAGGAAA	NA	False	NA	NA	False	AGTAAA	-33	NA	33570982	33568102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_33570437_33570618
ES.34707.1	chr9	+	2018	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-90	-1324	-90	1324	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCAGACATAGGATTCA	NA	False	NA	NA	False	AATAAA	-44	NA	33639452	33641470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_33639500_33641500
ES.34707.2	chr9	+	1791	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-88	1292	multi-exon	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	33639454	33641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_33639722_33639914
ES.34707.3	chr9	+	1784	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-88	-1092	-88	1092	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAATTTTTCAACCTTC	NA	False	NA	NA	False	TATAAA	-37	NA	33639454	33641238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_33639500_33641200
ES.34707.4	chr9	+	1837	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-87	1324	multi-exon	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCAGACATAGGATTCA	NA	False	NA	NA	False	AATAAA	-44	NA	33639455	33641470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_33641045_33641222
ES.34707.5	chr9	+	995	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-69	-322	-69	322	mono-exon	FALSE	NA	NA	NA	NA	NA	669	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGCCCACAGCCTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	33639473	33640468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_33639500_33640500
ES.34707.6	chr9	+	1846	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-68	1292	multi-exon	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	33639474	33641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_33639900_33640017
ES.34707.7	chr9	+	1868	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-68	1292	multi-exon	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	33639474	33641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_33639612_33639707
ES.34707.8	chr9	+	1894	2	Genic_Genomic	ENSMUSG00000079884.7	novel	604	1	NA	NA	-59	1292	multi-exon	FALSE	non_canonical	0	0	junction_1	0	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAGTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	33639483	33641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_33640709_33640769
ES.34708.1	chr9	+	174	1	Intergenic	novelGene_28224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAAAAGAAAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	34849871	34850045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_34849900_34850000
ES.34709.1	chr9	+	2289	1	Intergenic	novelGene_28225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACAGTTCCATCCAAGA	NA	False	NA	NA	False	NA	NA	NA	34851529	34853818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_34851500_34853800
ES.3471.1	chr10	-	3396	2	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-998	1077	intron_retention	FALSE	canonical	3	31	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCGTTTTTGACTGTGTG	8461	False	NA	1	True	AATAAA	-22	NA	84390200	84382203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84385495_84390095
ES.3471.2	chr10	-	708	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	1075	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCGTTTTTGACTGTG	8447	False	NA	-1	True	AATAAA	-20	NA	84390214	84382205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84382384_84385083_84385495_84390095
ES.3471.3	chr10	-	2389	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1016	1074	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	10	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGGCGTTTTTGACTGT	8443	False	NA	-2	True	AATAAA	-19	NA	84390218	84382206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84384062_84385083_84385495_84390095
ES.3471.4	chr10	-	844	4	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	1072	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	10.8012344973464	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATAGGCGTTTTTGACT	8447	False	NA	-4	True	AATAAA	-17	NA	84390214	84382208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84382384_84383922_84384062_84385083_84385495_84390095
ES.3471.5	chr10	-	2161	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	850	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	10	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAAATTTCATAAATTCA	8447	False	NA	NA	False	AGTAAA	-16	NA	84390214	84382430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84384062_84385083_84385495_84390095
ES.3471.6	chr10	-	2396	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	0	intron_retention	FALSE	canonical	0	0	junction_2	1	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTAAGTCAAGCATCT	8447	False	NA	NA	False	AATAAA	-17	NA	84390214	84383280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84385495_84388511_84388575_84390095
ES.3471.7	chr10	-	2331	2	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1012	-2	intron_retention	FALSE	canonical	3	31	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATTTAAGTCAAGCAT	8447	False	NA	NA	False	AATAAA	-15	NA	84390214	84383282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84385495_84390095
ES.3471.8	chr10	-	1308	3	NNC	ENSMUSG00000097076.2	novel	1334	4	NA	NA	-1011	-2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	10	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATTTAAGTCAAGCAT	8448	False	NA	NA	False	AATAAA	-15	NA	84390213	84383282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84384062_84385083_84385495_84390095
ES.3471.9	chr10	-	180	1	Intergenic	novelGene_2669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCTTAAAAATTAAGA	9804	False	NA	NA	False	NA	NA	NA	84388857	84388677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84388700_84388900
ES.34710.1	chr9	+	1929	1	Intergenic	novelGene_28228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGTAAAGTGACAGTCTA	NA	False	NA	NA	False	NA	NA	NA	34893793	34895722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_34893800_34895700
ES.34711.1	chr9	-	6113	11	NNC	ENSMUSG00000053889.6	novel	3799	4	NA	NA	-105715	1	intron_retention	FALSE	canonical	0	0	junction_8	9.80866963456309	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGATTTGTCTTTGGTTT	2312	False	NA	NA	False	NA	NA	NA	34946520	34829527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34834310_34839486_34839616_34851308_34851397_34869154_34869286_34894916_34895038_34895356_34895445_34895840_34895970_34896290_34896441_34910555_34910641_34945368_34945540_34946281
ES.34711.10	chr9	-	1147	4	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGATGTCGGATGCAT	2309	False	NA	NA	False	ATTAAA	-16	NA	34946523	34915701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_34916338_34916907_34916944_34945368_34945540_34946219
ES.34711.11	chr9	-	1414	4	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTAGTGTTTCCCATG	2331	False	NA	NA	False	NA	NA	NA	34946501	34925866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_34926707_34926906_34927051_34945368_34945579_34946281
ES.34711.2	chr9	-	2596	14	NNC	ENSMUSG00000053889.6	novel	3799	4	NA	NA	-105635	-3274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.98256035507385	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATAGTACTTGAGGA	2392	False	NA	NA	False	AATAAA	-26	NA	34946440	34832802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34833002_34834155_34834310_34845849_34846763_34847808_34847932_34851308_34851397_34869154_34869286_34894916_34895038_34895356_34895445_34895840_34895970_34896290_34896441_34916212_34916338_34916907_34916944_34945368_34945549_34946281
ES.34711.3	chr9	-	2773	11	NNC	ENSMUSG00000053889.6	novel	3799	4	NA	NA	-59239	-3274	intron_retention	FALSE	canonical	0	0	junction_4	9.49789450352024	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATAGTACTTGAGGA	NA	False	NA	NA	False	AATAAA	-26	NA	34900044	34832802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34834310_34839486_34839616_34845849_34845975_34847830_34847932_34851308_34851397_34869154_34869286_34894916_34895038_34895356_34895445_34895840_34895918_34896290_34896441_34899788
ES.34711.4	chr9	-	2590	10	NNC	ENSMUSG00000053889.6	novel	3799	4	NA	NA	-60380	-3274	intron_retention	FALSE	canonical	0	0	junction_1	9.81432563421048	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATAGTACTTGAGGA	NA	False	NA	NA	False	AATAAA	-26	NA	34901185	34832802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34834310_34845849_34845975_34847830_34847932_34851308_34851397_34869154_34869286_34894916_34895038_34895356_34895445_34895840_34895970_34896290_34896441_34901035
ES.34711.5	chr9	-	1420	10	Antisense	novelGene_ENSMUSG00002075887.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	9.7271416125508	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGAGATGACTTT	NA	False	NA	NA	False	AATATA	-4	NA	34901164	34846238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_34846343_34846396_34846763_34847808_34847932_34851308_34851397_34869154_34869286_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34901035
ES.34711.6	chr9	-	3475	1	Intergenic	novelGene_28226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATACGTTGTCTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	34880540	34877065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_34877100_34880500
ES.34711.7	chr9	-	5510	1	Intergenic	novelGene_28227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCGCTGTCTCATCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	34894842	34889332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_34889300_34894800
ES.34711.8	chr9	-	1626	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_5	6.40624695121879	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTATGCGCTGTCTCA	NA	False	NA	NA	False	AATAAA	-9	NA	34899995	34889338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895961_34896290_34896441_34899788
ES.34711.9	chr9	-	1513	6	Antisense	novelGene_ENSMUSG00000032036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_5	6.15142259969188	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGTATGCGCTGTCT	NA	False	NA	NA	False	AATAAA	-7	NA	34901122	34889340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_34890279_34894916_34895038_34895356_34895445_34895840_34895970_34896290_34896441_34901035
ES.34712.1	chr9	+	158	1	Intergenic	novelGene_28229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35012660	35012818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_35012700_35012800
ES.34713.1	chr9	+	1944	2	NIC	ENSMUSG00000070315.13	novel	639	3	NA	NA	321	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGCTTTTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	35028383	35038192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35029643_35037507
ES.34713.2	chr9	+	3442	1	NIC	ENSMUSG00000070315.13	novel	2402	6	NA	NA	5251	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAAGCATGGCAGCTTT	NA	False	NA	NA	False	AATAAA	-6	NA	35034741	35038183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35034700_35038200
ES.34714.1	chr9	+	7865	2	NNC	ENSMUSG00000070315.13	novel	2402	6	NA	NA	10297	5639	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	35039787	35047857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35044856_35045060
ES.34715.1	chr9	-	2199	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	-106	2	-106	-2	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028275	34957873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ES.34715.10	chr9	-	6195	9	NIC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	96	-5	intron_retention	FALSE	canonical	0	0	junction_8	60.0300705896636	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCACTTGTGGGGCTC	NA	False	NA	-7	True	ATTAAA	-19	NA	35028073	34957876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_34958816_34959114_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_35027993
ES.34715.11	chr9	-	2250	12	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	56	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.5079518609261	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAAGCACTTGTGGG	NA	False	NA	-11	True	ATTAAA	-15	NA	35028113	34957880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35017855_35018076_35027993
ES.34715.12	chr9	-	2023	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	49	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	54.8036495135132	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATGGAAGCACTTGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	35028120	34957882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966505_34966579_34966869_34966946_35027993
ES.34715.14	chr9	-	1893	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	23	179	23	-179	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGCCTCCCAGAAAG	NA	False	NA	0	True	AATAAA	-36	NA	35028146	34958050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ES.34715.15	chr9	-	2410	1	Intergenic	novelGene_28230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAAGGCTATCCTCAG	NA	False	NA	NA	False	AAAAAG	-11	NA	35016408	35013998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35014000_35016400
ES.34715.16	chr9	-	3515	1	Intergenic	novelGene_28231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTTGCATTGAGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	35023280	35019765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35019800_35023300
ES.34715.3	chr9	-	6347	10	NIC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	23	-2	intron_retention	FALSE	canonical	3	169	junction_1	8.57789291805279	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028146	34957873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_34958816_34959114_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ES.34715.4	chr9	-	2563	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	-552	-2	intron_retention	FALSE	canonical	0	0	junction_2	54.7745378802962	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028721	34957873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959177_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ES.34715.6	chr9	-	2252	12	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.5079518609261	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028123	34957873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35017870_35018076_35027993
ES.34715.7	chr9	-	2010	11	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	54.7102367021017	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTTGTGGGGCTCTGT	NA	False	NA	-4	True	ATTAAA	-22	NA	35028113	34957873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966896_34966946_35027993
ES.34715.9	chr9	-	2200	12	NNC	ENSMUSG00000032038.8	novel	2095	11	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.6993543729065	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACTTGTGGGGCTCTG	NA	False	NA	-5	True	ATTAAA	-21	NA	35028146	34957874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027571_35027703_35027993
ES.34716.1	chr9	-	6076	5	NIC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-12	3396	intron_retention	FALSE	canonical	3	621	junction_3	33.5959446957516	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTTTAAAATTTTGTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	35087301	35032307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.11	chr9	-	166	1	Intergenic	novelGene_28232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAAAGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	35059483	35059317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35059300_35059500
ES.34716.12	chr9	-	4146	3	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	-24	-27088	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	355.5	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTTTTTCCATTCT	NA	False	NA	NA	False	NA	NA	NA	35087313	35064690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35068415_35082372_35082548_35087066
ES.34716.13	chr9	-	302	1	Intergenic	novelGene_28233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAAGTCTTTTACAA	NA	False	NA	NA	False	AATACA	-28	NA	35076561	35076259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35076300_35076600
ES.34716.14	chr9	-	177	1	Intergenic	novelGene_28234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTGTCCTATGGTAA	NA	False	NA	NA	False	NA	NA	NA	35076561	35076384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35076400_35076600
ES.34716.15	chr9	-	750	3	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	0	-48685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGACATGGATGTGCC	NA	False	NA	NA	False	NA	NA	NA	35087289	35086287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35086353_35086396_35086859_35087066
ES.34716.2	chr9	-	1375	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	309.636570119803	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTAGCCCAGTAGGGT	NA	False	NA	0	True	AATAAA	-25	NA	35087292	35035700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35036141_35037206_35037370_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.3	chr9	-	1276	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	-3	1	-3	-1	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTGTAGCCCAGTA	NA	False	NA	-4	True	AATAAA	-21	NA	35087360	35035704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.4	chr9	-	5324	5	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	41714	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	293.650621487509	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTGTAGCCCAGTA	8541	False	NA	-4	True	AATAAA	-21	NA	35045575	35035704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35036141_35037206_35037370_35037602_35037714_35040756_35044868_35045072
ES.34716.5	chr9	-	1405	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	302.376375105963	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTGTAGCCCAGTA	NA	False	NA	-4	True	AATAAA	-21	NA	35087348	35035704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.6	chr9	-	756	5	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.049974319465	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGGTGTAGCCCAGTA	NA	False	NA	-4	True	AATAAA	-21	NA	35087321	35035704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35035834_35040819_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.8	chr9	-	1364	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.882594255021	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	False	NA	-7	True	AATAAA	-18	NA	35087271	35035707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35036141_35037206_35037387_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34716.9	chr9	-	1254	7	NNC	ENSMUSG00000032040.16	novel	1445	7	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	309.882594255021	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGACTGATGGTGTAG	NA	False	NA	-11	True	AATAAA	-14	NA	35087303	35035711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35036141_35037206_35037249_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ES.34717.1	chr9	-	176	1	Intergenic	novelGene_28235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATCCTTGTGTT	7597	False	NA	NA	False	NA	NA	NA	35091516	35091340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35091300_35091500
ES.34718.1	chr9	+	174	1	Intergenic	novelGene_28236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35100841	35101015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_35100800_35101000
ES.34719.1	chr9	-	4675	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	64	-2956	22	163	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATTTTATTGAGTTTC	7999	False	NA	NA	False	ATTAAA	-27	NA	35111202	35095683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
ES.34719.10	chr9	-	2374	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	1	-592	1	33	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAAAGCCAGGGTGTG	7936	False	NA	NA	False	NA	NA	NA	35111265	35098047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
ES.34719.11	chr9	-	2401	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-58	-33	2	33	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAAAGCCAGGGTGTG	7919	False	NA	NA	False	NA	NA	NA	35111282	35098047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.13	chr9	-	2349	8	NNC	ENSMUSG00000032041.16	novel	2310	7	NA	NA	-8	33	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	33.4913939600572	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGAAAGCCAGGGTGTG	8014	False	NA	NA	False	NA	NA	NA	35111187	35098047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35103207_35103251_35110506_35110616_35111152
ES.34719.14	chr9	-	3995	6	NIC	ENSMUSG00000032041.16	novel	2310	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	13.2574507353412	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8014	False	NA	NA	False	NA	NA	NA	35111187	35098080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35099227_35099952_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.15	chr9	-	1794	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-3	519	-3	40	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTGGTTCAGCGGTTA	7974	False	NA	NA	False	ATTAAA	-23	NA	35111227	35098599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.2	chr9	-	4663	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	33	-2386	-12	152	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTGTAAATGACTATTT	8010	False	NA	NA	False	ATTAAA	-16	NA	35111191	35095694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.3	chr9	-	4839	6	NIC	ENSMUSG00000032041.16	novel	1783	7	NA	NA	-8	151	combination_of_known_junctions	FALSE	canonical	3	40	junction_4	14.7648230602334	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTGTAAATGACTATT	8014	False	NA	NA	False	ATTAAA	-15	NA	35111187	35095695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102993_35110516_35110616_35111152
ES.34719.4	chr9	-	4653	8	NNC	ENSMUSG00000032041.16	novel	4589	7	NA	NA	-17	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	35.6959953164589	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTTTCATCTTTTAAT	8005	False	NA	NA	False	NA	NA	NA	35111196	35095845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35103100_35103251_35110516_35110616_35111156
ES.34719.5	chr9	-	4537	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	39	-2793	-3	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTTTCATCTTTTAA	7974	False	NA	NA	False	NA	NA	NA	35111227	35095846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
ES.34719.6	chr9	-	4555	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-11	-2234	-11	0	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTTTCATCTTTTAA	7966	False	NA	NA	False	NA	NA	NA	35111235	35095846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.7	chr9	-	4765	6	NIC	ENSMUSG00000032041.16	novel	2310	7	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	13.2574507353412	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTGTTTCATCTT	7943	False	NA	NA	False	NA	NA	NA	35111258	35095850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102993_35110506_35110616_35111152
ES.34719.8	chr9	-	3399	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	29	-1118	-16	-1116	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTAGCAGAATTACAGT	8006	False	NA	NA	False	NA	NA	NA	35111195	35096962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.34719.9	chr9	-	2769	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	-15	-444	-15	444	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCATGTTTCCTTTGT	7962	False	NA	NA	False	AAGAAA	-12	NA	35111239	35097636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ES.3472.1	chr10	+	2492	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	221	12	-50	-12	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGACATGGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	84412710	84450211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ES.3472.2	chr10	+	2056	5	NIC	ENSMUSG00000020034.8	novel	2725	10	NA	NA	-3663	-12	intron_retention	FALSE	canonical	2	6	junction_2	2.58602010819715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGACATGGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	84426853	84450211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84427173_84430511_84430649_84440370_84440932_84444328_84444502_84449345
ES.3472.3	chr10	+	1718	5	NIC	ENSMUSG00000020034.8	novel	2725	10	NA	NA	-3659	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.54835134966506	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGACATGGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	84426857	84450211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84427173_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ES.3472.4	chr10	+	1850	6	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	14379	6	-3648	-6	3prime_fragment	FALSE	canonical	2	6	junction_2	2.36643191323985	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATGGTAATCTTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	84426868	84450217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ES.34720.1	chr9	-	2286	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	3	0	3	0	multi-exon	FALSE	canonical	3	179	junction_9	18.9747200242849	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122348	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ES.34720.10	chr9	-	5365	3	ISM	ENSMUSG00000039048.16	ENSMUST00000138692.2	735	6	-37	-3340	2	0	intron_retention	FALSE	canonical	3	185	junction_2	3	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122230	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35118877_35119187_35119283_35120333
ES.34720.11	chr9	-	5102	5	NNC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	32	junction_2	79.5565836370567	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122315	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116706_35116884_35116987_35117155_35118877_35119187_35119283_35120333
ES.34720.12	chr9	-	2194	11	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	76.5885761716459	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122198	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35120826_35121240_35121462_35122040
ES.34720.13	chr9	-	2395	10	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_8	19.4218916829234	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122276	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ES.34720.17	chr9	-	2099	10	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	2	-15	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.2654594122089	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122290	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35121240_35121462_35122102
ES.34720.18	chr9	-	2098	11	NNC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	-7	-15	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	76.9392617588705	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122225	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120804_35121240_35121462_35122102
ES.34720.19	chr9	-	4616	7	NNC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	-8	-15	intron_retention	FALSE	canonical	3	32	junction_2	68.6474487670315	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122305	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116706_35116884_35116987_35117155_35117317_35117518_35118877_35119187_35119283_35120333_35120453_35120711
ES.34720.2	chr9	-	2739	9	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	27	junction_6	62.1389571846841	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122209	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35121462_35122102
ES.34720.20	chr9	-	3901	6	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	-4	-15	intron_retention	FALSE	canonical	3	185	junction_5	22.7191549138607	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122280	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117015_35117155_35117596_35118774_35118877_35119187_35119283_35120333
ES.34720.21	chr9	-	3163	2	FSM	ENSMUSG00000039048.16	ENSMUST00000140177.2	878	2	-1642	-643	-875	-15	multi-exon	FALSE	canonical	3	246	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	341	False	NA	NA	False	NA	NA	NA	35118860	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35116706_35116884
ES.34720.22	chr9	-	3474	8	NNC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	-2	-15	intron_retention	FALSE	canonical	3	27	junction_7	84.0473627407396	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122268	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333
ES.34720.23	chr9	-	3841	8	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	236	-15	intron_retention	FALSE	canonical	3	179	junction_7	21.2727669155871	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35121957	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117317_35117518_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240
ES.34720.24	chr9	-	3748	9	NIC	ENSMUSG00000039048.16	novel	2240	11	NA	NA	1	-15	intron_retention	FALSE	canonical	3	185	junction_6	18.3098334236006	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122231	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35118877_35119187_35119283_35120333_35120453_35120711_35121462_35122102
ES.34720.25	chr9	-	2156	11	NNC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	95.6650406365878	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122220	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35120804_35121235_35121462_35122040
ES.34720.26	chr9	-	2167	11	NNC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	8	-15	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	75.5192690642594	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122210	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122040
ES.34720.27	chr9	-	3365	10	NIC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	-12	-15	intron_retention	FALSE	canonical	3	10	junction_9	80.3008232972877	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122205	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35118877_35119187_35119279_35120333_35120453_35120711_35120826_35121240_35121462_35122040
ES.34720.29	chr9	-	4228	7	NNC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	354	-15	intron_retention	FALSE	canonical	3	32	junction_3	69.355765601875	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35121839	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35118877_35119187_35119283_35120333
ES.34720.3	chr9	-	1764	9	NIC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	905	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	97.7246610380409	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35121288	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35120804_35121240
ES.34720.31	chr9	-	4564	7	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	3	-15	intron_retention	FALSE	canonical	3	27	junction_5	70.5659659861293	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122229	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35118877_35119187_35119279_35120333_35120453_35120711
ES.34720.32	chr9	-	3696	8	NNC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	236	-15	intron_retention	FALSE	canonical	0	0	junction_7	98.6124138395634	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35121957	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116706_35116884_35116987_35117155_35117317_35117518_35118877_35119187_35119283_35120333_35120804_35121240_35121462_35121855
ES.34720.33	chr9	-	2945	9	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	4	-15	intron_retention	FALSE	canonical	1	3	junction_1	95.2089806688424	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122272	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35121462_35122040
ES.34720.34	chr9	-	2347	10	NNC	ENSMUSG00000039048.16	novel	2212	11	NA	NA	3	-15	intron_retention	FALSE	canonical	2	9	junction_8	80.0236076278605	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122215	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120804_35121240_35121462_35122102
ES.34720.35	chr9	-	3308	9	ISM	ENSMUSG00000039048.16	ENSMUST00000043805.15	2232	11	-35	15	-14	-15	intron_retention	FALSE	canonical	1	3	junction_1	68.854919940408	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122311	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711
ES.34720.36	chr9	-	2320	10	NNC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	-2	-15	intron_retention	FALSE	canonical	3	32	junction_2	57.0862462084593	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122244	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ES.34720.37	chr9	-	4323	8	NNC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	-4	-15	intron_retention	FALSE	canonical	3	27	junction_6	85.1586754241751	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	35122197	35115518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35118877_35119187_35119279_35120333_35120453_35120711
ES.34720.38	chr9	-	3821	6	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	990	-16	intron_retention	FALSE	canonical	3	185	junction_5	22.8560714034586	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	35121203	35115519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35118877_35119187_35119283_35120333
ES.34720.39	chr9	-	3951	5	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	4	-31	intron_retention	FALSE	canonical	3	185	junction_4	10.6770782520313	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35122228	35115534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333
ES.34720.4	chr9	-	4090	7	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	27	junction_4	71.6403052292027	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122240	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117317_35117518_35118877_35119187_35119279_35120333_35120453_35120711_35121462_35122102
ES.34720.5	chr9	-	2147	11	NIC	ENSMUSG00000039048.16	novel	2289	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	61.5681735964289	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122231	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120804_35121240_35121462_35122102
ES.34720.6	chr9	-	3217	9	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	27	junction_7	62.3778806950028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122227	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711
ES.34720.8	chr9	-	2172	11	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	77.7917733439726	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122220	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ES.34720.9	chr9	-	4771	6	NIC	ENSMUSG00000039048.16	novel	3260	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	185	junction_4	22.2656686403081	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122215	35115503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35116706_35116884_35117015_35117155_35118877_35119187_35119283_35120333_35120453_35120711
ES.34721.1	chr9	+	3111	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	-63	-55	-63	55	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATATAGTTCTTGAGC	5449	False	NA	58	True	TATAAA	-21	NA	35122387	35128365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.12	chr9	+	3364	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	7	-9	intron_retention	FALSE	canonical	3	518	junction_4	143.52625238599	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGCCTCTTAGGTTC	5519	False	NA	-6	True	AATAAA	-9	NA	35122457	35128301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125352_35125482_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.13	chr9	+	4608	8	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	9	-11	intron_retention	FALSE	canonical	3	518	junction_3	175.98654865109	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5521	False	NA	-8	True	AATAAA	-7	NA	35122459	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35123372_35123643_35123808_35124015_35124177_35124425_35124833_35125042_35126029_35126113_35126927_35127010_35127110_35127233
ES.34721.14	chr9	+	3353	12	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	10	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	285.854467971911	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5522	False	NA	-1	True	AATAAA	-14	NA	35122460	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124422_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.15	chr9	+	4110	9	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	15	-7	intron_retention	FALSE	canonical	3	518	junction_4	160.473079907503	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTCTTAGGTTCAT	5527	False	NA	-4	True	AATAAA	-11	NA	35122465	35128303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35125132_35125232_35125352_35125482_35126029_35126113
ES.34721.17	chr9	+	2815	15	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	273.680396052902	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5533	False	NA	3	True	AATAAA	-18	NA	35122471	35128310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127457_35127613
ES.34721.18	chr9	+	3385	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	21	-4	intron_retention	FALSE	canonical	3	518	junction_4	147.659592888172	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5533	False	NA	-1	True	AATAAA	-14	NA	35122471	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.19	chr9	+	3747	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	21	-775	21	775	multi-exon	FALSE	canonical	3	518	junction_4	138.528744373691	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATCTGAAGCTGCAGG	5533	False	NA	NA	False	AATAAA	-18	NA	35122471	35129085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.2	chr9	+	2171	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	-47	869	-47	-869	multi-exon	FALSE	canonical	3	518	junction_4	138.528744373691	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTTGTCTTCAGTGTA	5465	False	NA	NA	False	NA	NA	NA	35122403	35127441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.20	chr9	+	2794	13	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	22	-4	combination_of_known_splicesites	TRUE	canonical	1	1	junction_9	291.311819857844	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5534	False	NA	-1	True	AATAAA	-14	NA	35122472	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.21	chr9	+	4103	11	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	23	-11	intron_retention	FALSE	canonical	3	518	junction_2	146.36560388288	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5535	False	NA	-8	True	AATAAA	-7	NA	35122473	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.23	chr9	+	2887	15	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	24	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	273.680396052902	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAAATTGCCTCTTAG	5536	False	NA	-10	True	AATAAA	-5	NA	35122474	35128297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127872_35127940
ES.34721.24	chr9	+	3479	11	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	26	-9	intron_retention	FALSE	non_canonical	0	0	junction_4	295.460471129388	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGCCTCTTAGGTTC	5538	False	NA	-6	True	AATAAA	-9	NA	35122476	35128301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124422_35124583_35124678_35124833_35125042_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.25	chr9	+	3176	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	26	-11	intron_retention	FALSE	canonical	3	518	junction_4	140.90363625806	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5538	False	NA	-8	True	AATAAA	-7	NA	35122476	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010
ES.34721.26	chr9	+	4494	6	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	29	-13	intron_retention	FALSE	non_canonical	0	0	junction_5	404.545868845549	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAAATTGCCTCTTAG	5541	False	NA	-10	True	AATAAA	-5	NA	35122479	35128297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35125132_35125232_35127457_35127613
ES.34721.27	chr9	+	3998	9	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	29	-4	intron_retention	FALSE	canonical	3	518	junction_4	165.063198124234	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5541	False	NA	-1	True	AATAAA	-14	NA	35122479	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35126927_35127010_35127110_35127233
ES.34721.28	chr9	+	4823	7	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	29	0	intron_retention	FALSE	canonical	3	518	junction_2	164.387415036012	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5541	False	NA	3	True	AATAAA	-18	NA	35122479	35128310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35123808_35124015_35124177_35124425_35124583_35124678_35125570_35125855_35126029_35126113_35126927_35127010
ES.34721.29	chr9	+	4232	9	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	29	-11	intron_retention	FALSE	canonical	3	822	junction_6	84.4384946277466	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5541	False	NA	-8	True	AATAAA	-7	NA	35122479	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35124583_35124678_35124833_35125042_35125352_35125482_35126029_35126113_35126927_35127010_35127110_35127233
ES.34721.3	chr9	+	2825	13	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	291.311819857844	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5484	False	NA	-1	True	AATAAA	-14	NA	35122422	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35126132_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.30	chr9	+	2957	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	279.836659880398	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTAGGTTCATATTATT	5541	False	NA	2	True	AATAAA	-17	NA	35122479	35128309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125126_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.31	chr9	+	2619	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	33	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	360.288231097625	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5545	False	NA	-8	True	AATAAA	-7	NA	35122483	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127457_35127613
ES.34721.32	chr9	+	1438	6	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	33	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	399.861275944546	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTCTTAGGTTCAT	5545	False	NA	-4	True	AATAAA	-11	NA	35122483	35128303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124528_35127594
ES.34721.33	chr9	+	2933	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	37	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	279.836659880398	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5549	False	NA	-8	True	AATAAA	-7	NA	35122487	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125244_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.34	chr9	+	5411	4	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	40	-4	intron_retention	FALSE	canonical	3	852	junction_2	73.6945648531077	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5552	False	NA	-1	True	AATAAA	-14	NA	35122490	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35123808_35124015_35124583_35124678_35125132_35125232
ES.34721.35	chr9	+	3480	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	40	-4	intron_retention	FALSE	canonical	3	518	junction_4	148.706099848767	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5552	False	NA	-1	True	AATAAA	-14	NA	35122490	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126927_35127010_35127110_35127233
ES.34721.36	chr9	+	3479	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	40	-9	intron_retention	FALSE	canonical	3	822	junction_8	76.0911806229542	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGCCTCTTAGGTTC	5552	False	NA	-6	True	AATAAA	-9	NA	35122490	35128301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.37	chr9	+	2713	15	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	46	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	273.680396052902	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5558	False	NA	-8	True	AATAAA	-7	NA	35122496	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127435_35127657
ES.34721.38	chr9	+	3657	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	46	-11	intron_retention	FALSE	canonical	3	518	junction_4	147.625111528219	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5558	False	NA	-8	True	AATAAA	-7	NA	35122496	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126029_35126113_35126927_35127010_35127110_35127233
ES.34721.4	chr9	+	2995	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.775814198905	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5494	False	NA	-1	True	AATAAA	-14	NA	35122432	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122690_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.40	chr9	+	2960	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	266.255760834418	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5559	False	NA	-1	True	AATAAA	-14	NA	35122497	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124407_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.41	chr9	+	1214	5	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	52	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	434.745327749477	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5564	False	NA	-8	True	AATAAA	-7	NA	35122502	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124127_35127643
ES.34721.42	chr9	+	3026	13	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	52	0	intron_retention	FALSE	canonical	3	518	junction_4	140.644646775719	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5564	False	NA	3	True	AATAAA	-18	NA	35122502	35128310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.43	chr9	+	2902	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	52	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	266.255760834418	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5564	False	NA	-1	True	AATAAA	-14	NA	35122502	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124167_35124450_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.45	chr9	+	2920	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	55	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	276.62586614864	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5567	False	NA	-8	True	AATAAA	-7	NA	35122505	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127103_35127233
ES.34721.46	chr9	+	3512	13	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	56	-11	intron_retention	FALSE	canonical	3	518	junction_3	143.15344816742	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	5568	False	NA	-8	True	AATAAA	-7	NA	35122506	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.47	chr9	+	3072	11	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	117	-11	intron_retention	FALSE	non_canonical	0	0	junction_2	296.151329559737	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	6368	False	NA	-8	True	AATAAA	-7	NA	35123306	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35123808_35124015_35124177_35124422_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.48	chr9	+	2630	10	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	841	-116	intron_retention	FALSE	canonical	0	0	junction_6	320.769907150489	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTCCTGTAGTTTG	7092	False	NA	NA	False	NA	NA	NA	35124030	35128194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126029_35126132_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.49	chr9	+	1855	9	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-1153	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	327.723945379339	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	8103	False	NA	-8	True	AATAAA	-7	NA	35125041	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233_35127457_35127613
ES.34721.5	chr9	+	2049	13	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-5	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	289.990074063847	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGAGCAACTTGTCTTC	5507	False	NA	NA	False	NA	NA	NA	35122445	35127435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124848_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.50	chr9	+	1809	6	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3026	11	-718	-11	3prime_fragment	FALSE	canonical	3	822	junction_2	89.2784408466008	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	8538	False	NA	-8	True	AATAAA	-7	NA	35125476	35128299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.51	chr9	+	1511	5	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-195	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	421.218767388159	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAATTGCCTCTTAGG	9061	False	NA	-9	True	AATAAA	-6	NA	35125999	35128298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35126029_35126113_35126333_35126827_35126927_35127010_35127110_35127233
ES.34721.6	chr9	+	2986	14	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	282.381461751349	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTTAGGTTCATATT	5507	False	NA	-1	True	AATAAA	-14	NA	35122445	35128306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124023_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.7	chr9	+	4174	9	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	852	junction_4	69.4971896913825	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTCTTAGGTTCAT	5510	False	NA	-4	True	AATAAA	-11	NA	35122448	35128303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124583_35124678_35124833_35125042_35125132_35125232_35126927_35127010_35127110_35127233
ES.34721.8	chr9	+	3096	13	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	518	junction_4	140.870409320844	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5510	False	NA	3	True	AATAAA	-18	NA	35122448	35128310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ES.34721.9	chr9	+	970	2	NNC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGAAATTGCCTCTTAG	5511	False	NA	-10	True	AATAAA	-5	NA	35122449	35128297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35122724_35127601
ES.34722.1	chr9	+	1807	1	Intergenic	novelGene_28237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAGCAAAAAAA	1960	False	NA	NA	False	NA	NA	NA	35129830	35131637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_35129800_35131600
ES.34723.1	chr9	+	5594	2	Antisense	novelGene_ENSMUSG00000050471.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTACCTGTCAAGTT	NA	False	NA	NA	False	TATAAA	-45	NA	35170273	35175908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_35172771_35172811
ES.34724.1	chr9	+	1875	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	-55	1	-55	-1	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTAATTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	35179105	35187260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ES.34724.10	chr9	+	2820	4	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	3081	7	-1345	-7	3prime_fragment	FALSE	canonical	3	136	junction_3	11.1455023315337	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	35182241	35187254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35183924_35183997_35184143_35184763_35184862_35186359
ES.34724.2	chr9	+	1707	7	NNC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	-39	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.972215329473	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	35179121	35187254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35179229_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ES.34724.3	chr9	+	1890	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	4	-1	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTAATTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	35179164	35187260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
ES.34724.4	chr9	+	5647	4	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	10	-2	intron_retention	FALSE	canonical	3	136	junction_3	12.8322510366134	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTAATTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	35179170	35187259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35179375_35179697_35184143_35184763_35184862_35186359
ES.34724.5	chr9	+	967	2	ISM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	14	6797	14	-4594	5prime_fragment	FALSE	canonical	3	165	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35179174	35180464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35179375_35179697
ES.34724.6	chr9	+	1787	7	NNC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	20	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	57.9626316402789	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTTTTTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	35179180	35187256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183915_35183997_35184143_35184763_35184862_35186359
ES.34724.7	chr9	+	1698	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	22	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	61.8093844007526	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	35179182	35187254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183997_35184143_35184763_35184862_35186359
ES.34724.8	chr9	+	1757	7	NNC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.1044364884784	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	35179182	35187254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183864_35183924_35183997_35184143_35184763_35184862_35186359
ES.34724.9	chr9	+	4233	5	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	22	-7	intron_retention	FALSE	canonical	3	136	junction_4	11.146748404804	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	35179182	35187254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35179375_35179697_35179864_35181260_35184143_35184763_35184862_35186359
ES.34725.1	chr9	-	1921	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	9	18	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCACTAGTAGCACATC	6373	False	NA	NA	False	TATAAA	-34	NA	35179092	35128242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ES.34725.11	chr9	-	1410	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	-16	268	9	2	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCTCTACTTTGAA	6373	False	NA	-18	True	ATTAAA	-23	NA	35179092	35128528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ES.34725.13	chr9	-	3447	6	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	10	junction_5	66.4993233048277	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGGCTCTACTTTGA	6415	False	NA	-19	True	ATTAAA	-22	NA	35179050	35128529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35135039_35138459_35138688_35146526_35146780_35179018
ES.34725.14	chr9	-	1517	7	NIC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	64.4222183894829	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6399	False	NA	-20	True	ATTAAA	-21	NA	35179066	35128530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35179018
ES.34725.15	chr9	-	1686	10	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.3669234817637	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6391	False	NA	-20	True	ATTAAA	-21	NA	35179074	35128530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138522_35146526_35146780_35155909_35156003_35159964_35160037_35166646_35166809_35179018
ES.34725.16	chr9	-	1292	9	NNC	ENSMUSG00000050471.18	novel	1962	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.2854010018366	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6415	False	NA	-20	True	ATTAAA	-21	NA	35179050	35128530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35128782_35128917_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138522_35146526_35146780_35155909_35156003_35179018
ES.34725.17	chr9	-	1294	6	NIC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	77.9143119073768	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTCTGGCTCTACTTT	6393	False	NA	-21	True	ATTAAA	-20	NA	35179072	35128531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35179018
ES.34725.18	chr9	-	1914	9	NNC	ENSMUSG00000050471.18	novel	1962	10	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.0176288123309	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTCTGGCTCTACTTT	6410	False	NA	-21	True	ATTAAA	-20	NA	35179055	35128531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35136694_35137014_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ES.34725.19	chr9	-	1347	7	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	80.9334431630227	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGAACTCTGGCTCTAC	6399	False	NA	-24	True	ATTAAA	-17	NA	35179066	35128534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138522_35146526_35146780_35179018
ES.34725.2	chr9	-	10006	3	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	37182	-2	4850	2	intron_retention	FALSE	canonical	3	165	junction_2	21.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAATTTCTTTATGAAA	NA	False	NA	NA	False	TATAAA	-16	NA	35141891	35128313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35129044_35129224_35129285_35132675
ES.34725.20	chr9	-	1730	9	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	74.3164685651841	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCAGAACTCTGGCTC	6345	False	NA	-27	True	ATTAAA	-14	NA	35179120	35128537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35174112_35174186_35179018
ES.34725.21	chr9	-	173	1	Intergenic	novelGene_28238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCTAG	NA	False	NA	NA	False	NA	NA	NA	35135306	35135133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35135100_35135300
ES.34725.22	chr9	-	3204	1	NIC	ENSMUSG00000050471.18	novel	918	7	NA	NA	-4846	-14240	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35160805	35157601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35157600_35160800
ES.34725.3	chr9	-	1579	7	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	58.402815761647	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCAATTTCTTTATGA	6414	False	NA	NA	False	TATAAA	-14	NA	35179051	35128315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ES.34725.4	chr9	-	1666	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	65.4291952559157	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCAATTTCTTTATGA	6389	False	NA	NA	False	TATAAA	-14	NA	35179076	35128315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138522_35146526_35146780_35155909_35156003_35179018
ES.34725.6	chr9	-	1728	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	-50	182	-50	33	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGGCATTCTTCTAT	6314	False	NA	13	True	NA	NA	NA	35179151	35128497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ES.34725.7	chr9	-	3559	7	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-3	4	intron_retention	FALSE	canonical	3	61	junction_2	44.6495614013546	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCTCTACTTTGAAGA	6399	False	NA	-16	True	ATTAAA	-25	NA	35179066	35128526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35129044_35129224_35129282_35132675_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ES.34725.8	chr9	-	1467	6	NIC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	71.2432452938522	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCTCTACTTTGAA	6391	False	NA	-18	True	ATTAAA	-23	NA	35179074	35128528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35129044_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35179018
ES.34725.9	chr9	-	1380	7	NIC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	66.654373866653	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGGCTCTACTTTGAA	6342	False	NA	-18	True	ATTAAA	-23	NA	35179123	35128528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35129044_35129224_35129285_35132675_35132901_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ES.34726.1	chr9	+	159	1	Intergenic	novelGene_28239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAACAAACAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	35207729	35207888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_35207700_35207900
ES.34727.1	chr9	+	4137	20	NIC	ENSMUSG00000038119.16	novel	7213	19	NA	NA	16	-3147	intron_retention	TRUE	canonical	1	1	junction_1	4.0822567220348	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGATCACTCTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	35332439	35415800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35332480_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.10	chr9	+	6436	20	FSM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	24	1043	24	-1042	multi-exon	FALSE	canonical	1	3	junction_6	3.6977195937369	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTTTGAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	35332877	35417905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.11	chr9	+	7678	22	NNC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	27	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4.70200420431702	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGCCTGTGAAGAGGGAT	NA	False	NA	17	True	ATTAAA	-23	NA	35332880	35418947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35333112_35341743_35341824_35342033_35342157_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.12	chr9	+	3737	20	NNC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	115	-6148	intron_retention	FALSE	canonical	0	0	junction_18	4.48203554864079	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTATTTCAACCATGTA	NA	False	NA	NA	False	AATAAA	-26	NA	35332968	35412799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35409641_35409711_35412663
ES.34727.13	chr9	+	4920	1	Intergenic	novelGene_28240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35342684	35347604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_35342700_35347600
ES.34727.14	chr9	+	4371	16	ISM	ENSMUSG00000038119.16	ENSMUST00000042842.6	7213	19	-33	17351	-33	-17351	5prime_fragment	FALSE	canonical	1	3	junction_5	4.01109572173102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTTGGTTTTTTTTTTC	8614	False	NA	NA	False	NA	NA	NA	35363338	35401596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270
ES.34727.15	chr9	+	5290	12	ISM	ENSMUSG00000038119.16	ENSMUST00000042842.6	7213	19	18021	113	12619	-113	3prime_fragment	FALSE	canonical	2	5	junction_3	3.89320238279343	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTTGTGCTGTTATGT	NA	False	NA	-96	True	NA	NA	NA	35381392	35418834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.16	chr9	+	3883	4	NNC	ENSMUSG00000038119.16	novel	7213	19	NA	NA	34370	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.09120616516523	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCAGTCGCCTGTGAAG	NA	False	NA	11	True	ATTAAA	-17	NA	35403143	35418941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35403221_35414455_35414716_35415352_35416233_35416275
ES.34727.2	chr9	+	4483	17	NIC	ENSMUSG00000038119.16	novel	7213	19	NA	NA	37	-17256	intron_retention	FALSE	canonical	1	1	junction_1	4.3763390807843	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGCTAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-26	NA	35332460	35401691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35332480_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270
ES.34727.3	chr9	+	4385	20	FSM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	-143	3261	-139	-3260	multi-exon	FALSE	canonical	1	3	junction_6	3.6977195937369	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGCCTTACCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	35332710	35415687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.4	chr9	+	4490	20	FSM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	-141	3154	-137	-3153	multi-exon	FALSE	canonical	1	3	junction_6	3.6977195937369	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACAGGGGATCACTCT	NA	False	NA	NA	False	NA	NA	NA	35332712	35415794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.5	chr9	+	6384	20	NIC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	-136	-1046	intron_retention	FALSE	canonical	0	0	junction_2	4.1847897646072	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTAGGAGTTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	35332713	35417901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35333112_35363340_35363474_35364168_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ES.34727.6	chr9	+	3975	19	NNC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	-29	-16403	intron_retention	FALSE	canonical	0	0	junction_5	5.32522531836523	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGGCATTTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	35332820	35402544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367790_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35385306_35385478_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35402293
ES.34727.7	chr9	+	4759	17	ISM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	-11	17231	-7	-17230	5prime_fragment	FALSE	canonical	1	3	junction_6	3.9245819841099	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACCTATGACTTTGCGT	NA	False	NA	NA	False	CATAAA	-24	NA	35332842	35401717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270
ES.34727.8	chr9	+	4671	17	NNC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	19	-17230	intron_retention	FALSE	non_canonical	0	0	junction_14	3.8155725323993	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACCTATGACTTTGCGT	NA	False	NA	NA	False	CATAAA	-24	NA	35332872	35401717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389926_35394391_35394517_35398045_35398268_35400270
ES.34727.9	chr9	+	3769	20	NNC	ENSMUSG00000038119.16	novel	7503	20	NA	NA	24	-6153	intron_retention	FALSE	canonical	0	0	junction_5	4.84782271143977	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGGCCTATTTCAACC	NA	False	NA	NA	False	AATAAA	-21	NA	35332877	35412794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366756_35367790_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35409641_35409711_35412663
ES.34728.1	chr9	-	5747	3	ISM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	12572	-2	12572	2	3prime_fragment	FALSE	canonical	3	24	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCATATGCCTGCCT	NA	False	NA	NA	False	AATAAA	-26	NA	35457252	35447940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35453356_35454893_35455083_35457109
ES.34728.2	chr9	-	1745	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	-12	5201	-12	-5201	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGAGGGCTCTTTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	35469836	35453143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
ES.34728.3	chr9	-	3104	4	ISM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	9207	5202	9207	-5202	3prime_fragment	FALSE	canonical	3	24	junction_1	0.471404520791032	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTGAGGGCTCTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	35460617	35453144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076
ES.34729.1	chr9	+	2321	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	0	-305	0	6	multi-exon	FALSE	canonical	3	99	junction_2	2.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTCTTTTTCAAGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	35470761	35478440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585
ES.34729.10	chr9	+	1378	1	NIC	ENSMUSG00000032103.11	novel	2144	4	NA	NA	43	-5953	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACCCAAAAAACAAACC	NA	False	NA	NA	False	AATAGA	-43	NA	35470804	35472182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_35470800_35472200
ES.34729.11	chr9	+	1746	2	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	6236	-3	5365	3	3prime_fragment	FALSE	canonical	3	88	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTTCTTTTTCAAG	NA	False	NA	15	True	ATTAAA	-15	NA	35476126	35478437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35477152_35477716
ES.34729.12	chr9	+	1005	6	NNC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.03324125159934	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCATATATTCTGCC	NA	False	NA	NA	False	AATAAA	-22	NA	35481590	35557757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35481827_35485525_35485684_35518522_35518594_35518890_35519016_35523067_35523168_35557442
ES.34729.13	chr9	+	3258	5	NNC	ENSMUSG00000074452.14	novel	1690	11	NA	NA	14	2340	intron_retention	FALSE	canonical	0	0	junction_2	5.85234995535981	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTTTGGTCTGGGA	NA	False	NA	NA	False	AATAAA	-18	NA	35481593	35560093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_35481827_35485525_35485675_35518890_35519016_35523067_35523168_35557442
ES.34729.2	chr9	+	1796	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	7	216	1	47	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCTTTGCCAAAGTGT	NA	False	NA	59	True	NA	NA	NA	35470762	35478481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ES.34729.3	chr9	+	2601	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	7	-589	1	589	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACACACCATATCCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	35470762	35479286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ES.34729.4	chr9	+	4051	7	Fusion	ENSMUSG00000074452.14_ENSMUSG00000032103.11	novel	2019	4	NA	NA	2	-5829	multi-exon	FALSE	canonical	0	0	junction_3	46.917184721829	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTCAGTTCTATTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	35470763	35576530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_35470814_35476079_35476494_35476585_35477152_35477904_35478063_35518890_35519016_35523067_35523168_35573892
ES.34729.5	chr9	+	2000	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	18	1	12	-1	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTAGGACCCTTTAGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	35470773	35478696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ES.34729.6	chr9	+	2556	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	19	-559	19	-3	multi-exon	FALSE	canonical	3	99	junction_2	2.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTAGGACCCTTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	35470780	35478694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585
ES.34729.7	chr9	+	5205	4	FSM	ENSMUSG00000074452.14_ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	29	-3215	23	3215	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGACGTTTACAATGAT	NA	False	NA	NA	False	AATAAA	-14	NA	35470784	35481912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ES.34729.8	chr9	+	1596	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	29	394	23	-131	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAAAGGATGTATTC	NA	False	NA	NA	False	NA	NA	NA	35470784	35478303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ES.34729.9	chr9	+	2388	2	ISM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	29	259	23	4	intron_retention	FALSE	canonical	3	104	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTCTTTTTCAAGG	NA	False	NA	16	True	ATTAAA	-16	NA	35470784	35478438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_35470814_35476079
ES.3473.1	chr10	-	2723	1	NIC	ENSMUSG00000097309.3	novel	3500	2	NA	NA	543	-972	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAAGGGAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	84457899	84455176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84455200_84457900
ES.34730.1	chr9	-	1722	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	253	-2	-48	2	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGAACCTTGTTTTAAA	NA	False	NA	53	True	ATTAAA	-19	NA	35481441	35472113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ES.34730.2	chr9	-	3060	3	ISM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	285	-1	-16	1	intron_retention	FALSE	canonical	3	233	junction_2	13.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAACCTTGTTTTAA	NA	False	NA	52	True	ATTAAA	-18	NA	35481409	35472114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35473401_35475358_35475474_35479750
ES.34730.3	chr9	-	6007	3	NIC	ENSMUSG00000050555.10	novel	1973	4	NA	NA	-58	0	intron_retention	FALSE	canonical	3	260	junction_1	15	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	51	True	ATTAAA	-17	NA	35481451	35472115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_35473401_35475358_35479802_35481172
ES.34730.4	chr9	-	5851	4	NNC	ENSMUSG00000050555.10	novel	1973	4	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_2	130.213499897497	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	51	True	ATTAAA	-17	NA	35481398	35472115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35473401_35475358_35475474_35475576_35479802_35481172
ES.34730.6	chr9	-	1769	5	NNC	ENSMUSG00000050555.10	novel	1973	4	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.908484148003	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGGAGTTTGAACCT	NA	False	NA	44	True	ATTAAA	-10	NA	35481409	35472122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_35473401_35475358_35475474_35475576_35475665_35479750_35479802_35481172
ES.34730.7	chr9	-	7330	2	ISM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	284	7	-17	-7	intron_retention	FALSE	canonical	3	260	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGGAGTTTGAACCT	NA	False	NA	44	True	ATTAAA	-10	NA	35481410	35472122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_35473401_35475358
ES.34730.8	chr9	-	1381	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	338	254	37	-254	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGACTTCACTGGTTC	NA	False	NA	NA	False	AATATA	-29	NA	35481356	35472369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ES.34731.1	chr9	-	178	1	Intergenic	novelGene_28241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	35528260	35528082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_35528100_35528300
ES.34732.1	chr9	+	532	2	FSM	ENSMUSG00000074452.14	ENSMUST00000173488.2	1449	2	920	-3	872	3	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCTGAGTTAAGATT	NA	False	NA	NA	False	AATATA	-18	NA	35581866	35582714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_35581907_35582222
ES.34733.1	chr9	-	5939	1	FSM	ENSMUSG00000111619.2	ENSMUST00000215334.2	2440	1	-1754	-1745	-1754	1745	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTGTCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	36005409	35999470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_35999500_36005400
ES.34734.1	chr9	+	178	1	Intergenic	novelGene_28242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTTTAATTAA	NA	False	NA	NA	False	NA	NA	NA	36391596	36391774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_36391600_36391800
ES.34735.1	chr9	-	177	1	Intergenic	novelGene_28243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36403649	36403472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36403500_36403600
ES.34736.1	chr9	+	179	1	Intergenic	novelGene_28244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATTGTCAAA	NA	False	NA	NA	False	NA	NA	NA	36619195	36619374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_36619200_36619400
ES.34737.1	chr9	+	4915	1	Antisense	novelGene_ENSMUSG00000032116.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAACTTGGGGCATC	NA	False	NA	NA	False	NA	NA	NA	36648533	36653448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_36648500_36653400
ES.34738.1	chr9	+	1865	1	Intergenic	novelGene_28246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAAAGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	36663835	36665700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_36663800_36665700
ES.34739.1	chr9	+	232	1	NIC	ENSMUSG00000096993.4	novel	608	4	NA	NA	95	-14464	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAAACGTTTCACTCAGG	NA	False	NA	NA	False	GATAAA	-20	NA	36679277	36679509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_36679300_36679500
ES.3474.1	chr10	+	3906	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	0	-910	combination_of_known_splicesites	FALSE	canonical	2	6	junction_20	43.0505585528919	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAACCTTCTTCCTTTA	NA	False	NA	50	True	TTTAAA	-12	NA	84458155	84562132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.11	chr10	+	4877	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	60	-953	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_27	43.5286513026187	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTTTGTTTATGTTA	NA	False	NA	7	True	NA	NA	NA	84458216	84562089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84560598
ES.3474.12	chr10	+	4961	29	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	71	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	54.923323174872	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGTCTGAGAGGTGAT	NA	False	NA	20	True	NA	NA	NA	84458227	84563040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84543947_84544008_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.14	chr10	+	4886	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.4135376786123	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458238	84563042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464398_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.15	chr10	+	4932	29	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	85	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	55.5506296002088	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	21	True	NA	NA	NA	84458241	84563041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84560598_84560643_84561514
ES.3474.17	chr10	+	4812	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	89	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.8197141996353	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	21	True	NA	NA	NA	84458245	84563041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509321_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.2	chr10	+	4984	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	-9	0	9	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGATGTGAGTGGGCA	NA	False	NA	31	True	NA	NA	NA	84458155	84563051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.20	chr10	+	3789	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	92	-958	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	44.6515768322852	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATATCTGGTTTGTTTA	NA	False	NA	2	True	NA	NA	NA	84458248	84562084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.21	chr10	+	2045	17	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	95	13024	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.7899704050908	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTGCCGTCTATTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	84458251	84516372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229
ES.3474.22	chr10	+	4202	12	FSM	ENSMUSG00000034453.9	ENSMUST00000213263.2	1387	12	95	-2910	95	2910	multi-exon	FALSE	canonical	3	154	junction_10	24.1866023975504	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACAGATCTGTTGAATT	NA	False	NA	NA	False	NA	NA	NA	84458251	84494965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808
ES.3474.26	chr10	+	3970	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	95	-903	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	43.8197141996353	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTTCCTTTAAATTTCC	NA	False	NA	57	True	TTTAAA	-19	NA	84458251	84562139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510426_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.29	chr10	+	4860	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	102	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	43.7414149915104	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACTCAGTCTGAGAGGT	NA	False	NA	17	True	NA	NA	NA	84458258	84563037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475612_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.3	chr10	+	4114	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	861	0	-861	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGGGTTCTCATCAGA	NA	False	NA	99	True	TTTAAA	-28	NA	84458155	84562181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.30	chr10	+	3847	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	103	-952	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.8197141996353	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTTTGTTTATGTTAT	NA	False	NA	8	True	NA	NA	NA	84458259	84562090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509321_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.31	chr10	+	4758	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	105	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	44.1609649849544	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAACGGTACTCAGTCT	NA	False	NA	10	True	NA	NA	NA	84458261	84563030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.32	chr10	+	6077	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	107	-953	intron_retention	FALSE	canonical	3	154	junction_10	23.0751601890752	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTTTGTTTATGTTA	NA	False	NA	7	True	NA	NA	NA	84458263	84562089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.33	chr10	+	4072	29	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	114	-954	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	55.7432502548927	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGGTTTGTTTATGTT	NA	False	NA	6	True	NA	NA	NA	84458270	84562088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84499442_84499609_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.34	chr10	+	3892	28	NNC	ENSMUSG00000034453.9	novel	787	7	NA	NA	367	-956	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.7320422498416	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATCTGGTTTGTTTATG	NA	False	NA	4	True	NA	NA	NA	84458523	84562086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458644_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.35	chr10	+	4838	28	NNC	ENSMUSG00000034453.9	novel	787	7	NA	NA	376	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	42.7320422498416	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	21	True	NA	NA	NA	84458532	84563041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458644_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.36	chr10	+	4742	28	NNC	ENSMUSG00000034453.9	novel	787	7	NA	NA	381	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.8569504043023	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGTACTCAGTCTGAG	NA	False	NA	13	True	NA	NA	NA	84458537	84563033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458561_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.37	chr10	+	4690	26	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	6189	7	6188	-7	3prime_fragment	FALSE	canonical	3	154	junction_8	23.0548563213914	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGTACTCAGTCTGAGAG	NA	False	NA	15	True	NA	NA	NA	84464344	84563035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.38	chr10	+	3546	23	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	10161	953	-5681	-953	3prime_fragment	FALSE	canonical	3	154	junction_5	22.6659171809325	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTTTGTTTATGTTA	NA	False	NA	7	True	NA	NA	NA	84468316	84562089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.39	chr10	+	3327	1	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	5638	-4736	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTCTTAAACACA	NA	False	NA	NA	False	NA	NA	NA	84480597	84483924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84480600_84483900
ES.3474.4	chr10	+	5114	29	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	55.6680554533674	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCAGTCTGAGAGGTGA	NA	False	NA	19	True	NA	NA	NA	84458156	84563039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84557280_84557424_84561514
ES.3474.40	chr10	+	3443	20	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	7084	-867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.569615838782	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAATCCTGGGTTCTC	NA	False	NA	93	True	TTTAAA	-22	NA	84482043	84562175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84482277_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.41	chr10	+	4539	1	NIC	ENSMUSG00000034453.9	novel	787	7	NA	NA	17439	4882	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAGTGTAAGTTGTTG	4105	False	NA	NA	False	NA	NA	NA	84492398	84496937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84492400_84496900
ES.3474.42	chr10	+	3896	19	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	26569	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.836066119747	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	21	True	NA	NA	NA	84501528	84563041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84501607_84501863_84501916_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84535528_84535597_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.43	chr10	+	3695	16	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	45027	7	28223	-7	3prime_fragment	FALSE	canonical	3	160	junction_5	21.6277599394852	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGTACTCAGTCTGAGAG	NA	False	NA	15	True	NA	NA	NA	84503182	84563035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.44	chr10	+	2067	12	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	57452	954	40648	-954	3prime_fragment	FALSE	canonical	3	160	junction_1	23.6412582344741	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGGTTTGTTTATGTT	NA	False	NA	6	True	NA	NA	NA	84515607	84562088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.45	chr10	+	1995	11	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	58071	952	41267	-952	3prime_fragment	FALSE	canonical	3	178	junction_1	20.0459472213213	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTTTGTTTATGTTAT	NA	False	NA	8	True	NA	NA	NA	84516226	84562090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.46	chr10	+	1827	9	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	70504	891	53700	-891	3prime_fragment	FALSE	canonical	3	188	junction_5	19.1963538204525	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTCTGAGGTCTTC	NA	False	NA	69	True	TTTAAA	-31	NA	84528659	84562151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.47	chr10	+	1974	4	ISM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	91952	10	75148	-10	3prime_fragment	FALSE	canonical	3	195	junction_3	23.7907545067406	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACGGTACTCAGTCTGA	25	False	NA	12	True	NA	NA	NA	84550107	84563032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.6	chr10	+	4809	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_20	43.0505585528919	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGTCTGAGAGGTGAT	NA	False	NA	20	True	NA	NA	NA	84458160	84563040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ES.3474.7	chr10	+	3491	24	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	19	-26891	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	44.6610422589103	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTGCTTTTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	84458175	84536151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84535528
ES.3474.8	chr10	+	5848	28	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_27	43.5286513026187	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTCTGAGAGGTGATG	NA	False	NA	21	True	NA	NA	NA	84458197	84563041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84560598
ES.3474.9	chr10	+	4488	29	NNC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	42	-956	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	55.5506296002088	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATCTGGTTTGTTTATG	NA	False	NA	4	True	NA	NA	NA	84458198	84562086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84560598_84561111_84561514
ES.34740.1	chr9	+	196	1	Intergenic	novelGene_28247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGGGATG	NA	False	NA	NA	False	NA	NA	NA	36680556	36680752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_36680600_36680800
ES.34741.1	chr9	-	5203	19	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	61712	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	424.446629575527	1434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTGGAAAAGAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	36678917	36578927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36578936_36641253_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.10	chr9	-	2967	12	FSM	ENSMUSG00000032113.17	ENSMUST00000174105.8	2142	12	-28	-797	-28	-161	multi-exon	FALSE	canonical	3	20	junction_10	131.27033490643	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTGTAACAACTGTTT	693	False	NA	-9	True	TATAAA	-17	NA	36637909	36619938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ES.34741.100	chr9	-	2464	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	2	-258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	579.833945922702	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678927	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644253_36645610_36645727_36646648_36646838_36652784_36652888_36653018_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.101	chr9	-	2358	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	-258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	436.751915043446	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678917	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659346_36660928_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.102	chr9	-	2387	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-3	-258	at_least_one_novel_splicesite	FALSE	canonical	2	121	junction_7	406.863485943101	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678898	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655385_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.103	chr9	-	2345	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-1	-258	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	447.554426683225	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678896	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.104	chr9	-	1179	10	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	5	-258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	593.293444352043	1138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678910	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653064_36670100_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.105	chr9	-	4858	16	NNC	ENSMUSG00000032116.19	novel	858	8	NA	NA	2	-6024	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456.535066196088	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTTACTGCTTTATCA	NA	False	NA	NA	False	AATAAA	-13	NA	36678903	36649745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36651530_36651581_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.106	chr9	-	2737	15	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	79	11272	-1	-8190	5prime_fragment	FALSE	canonical	3	1637	junction_3	99.3754989719215	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGACTGTAAATACT	NA	False	NA	NA	False	ATTAAA	-14	NA	36678896	36651911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.107	chr9	-	173	1	Intergenic	novelGene_28248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGCAAGT	9002	False	NA	NA	False	NA	NA	NA	36684159	36683986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36684000_36684200
ES.34741.108	chr9	-	2430	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	88	-298	-32	298	multi-exon	TRUE	canonical	3	488	junction_2	34.4551882885582	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGTTAAATATTTGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	36708601	36690156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.109	chr9	-	2315	11	NNC	ENSMUSG00000062762.18	novel	2104	11	NA	NA	-1421	4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	163.709010136889	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	36710110	36690450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36709838
ES.34741.11	chr9	-	3097	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	34	266	34	-266	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTAATTTTTTGTGT	682	False	NA	NA	False	NA	NA	NA	36637920	36620043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.110	chr9	-	4418	8	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	34	4	intron_retention	FALSE	canonical	3	488	junction_2	32.2951945626085	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	36708535	36690450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.111	chr9	-	2409	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	-96	-4	-8	4	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	36708665	36690450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
ES.34741.112	chr9	-	2627	11	NNC	ENSMUSG00000062762.18	novel	2309	11	NA	NA	-34	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	165.183201325074	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATAATGTTTGATTTC	NA	False	NA	-4	True	ATTAAA	-21	NA	36708603	36690450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708019
ES.34741.113	chr9	-	4019	9	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	33	2	intron_retention	FALSE	canonical	3	17	junction_8	176.823667462814	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTATAATGTTTGATT	NA	False	NA	-6	True	ATTAAA	-19	NA	36708624	36690452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36695876_36696828_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
ES.34741.114	chr9	-	2107	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	164.227555544129	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTATAATGTTTGAT	NA	False	NA	-7	True	ATTAAA	-18	NA	36708620	36690453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697801_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.115	chr9	-	2230	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	-10	0	-10	0	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708699	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.118	chr9	-	2045	10	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_5	159.906994573659	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708639	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.120	chr9	-	2882	9	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	11	0	intron_retention	FALSE	canonical	3	488	junction_2	31.2227381086285	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708646	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.121	chr9	-	2627	7	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	198.099301698248	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708636	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694660_36699123_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.123	chr9	-	2462	10	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	9	0	intron_retention	FALSE	canonical	3	488	junction_2	33.8033528908992	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708648	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.125	chr9	-	4512	8	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	488	junction_2	29.451447419474	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708653	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36695876_36696828_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.126	chr9	-	2056	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	165.003909044604	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708567	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701180_36704535_36704646_36708508
ES.34741.127	chr9	-	6092	7	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	488	junction_2	30.6290530197864	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708687	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36701222_36704535_36704646_36708508
ES.34741.129	chr9	-	5340	8	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	193.836350079764	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708685	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36695244_36695295_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.13	chr9	-	5133	11	NIC	ENSMUSG00000032113.17	novel	2142	12	NA	NA	-17	3	intron_retention	FALSE	canonical	3	297	junction_10	58.2770109048156	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTCCTGTATTCCTTT	704	False	NA	NA	False	ATTAAA	-15	NA	36637898	36620732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36637175_36637858
ES.34741.130	chr9	-	2514	11	NIC	ENSMUSG00000062762.18	novel	2309	11	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	165.183201325074	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708729	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708254
ES.34741.131	chr9	-	2135	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	160.762060200782	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708648	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
ES.34741.132	chr9	-	4021	10	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	21	0	intron_retention	FALSE	non_canonical	0	0	junction_3	171.989304864152	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708636	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36695244_36695295_36695876_36696828_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.133	chr9	-	2223	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.799423542681	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708686	36690454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693630_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.134	chr9	-	4268	9	NIC	ENSMUSG00000062762.18	novel	2309	11	NA	NA	33	-2	intron_retention	FALSE	canonical	3	35	junction_8	170.949142656522	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATATGTATAATGTTT	NA	False	NA	-10	True	ATTAAA	-15	NA	36708624	36690456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36695876_36696828_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
ES.34741.135	chr9	-	2103	11	NNC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	217.725607129708	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATATGTATAATGTTT	NA	False	NA	-10	True	ATTAAA	-15	NA	36708612	36690456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696955_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708552
ES.34741.137	chr9	-	3893	8	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	27	123	intron_retention	FALSE	canonical	3	488	junction_2	29.451447419474	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTTGTTGTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	36708630	36691050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36691566_36693636_36693712_36694028_36695876_36696828_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ES.34741.14	chr9	-	2269	13	NNC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	130.519554729039	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGGTCCTGTATTCCTT	713	False	NA	NA	False	ATTAAA	-14	NA	36637889	36620733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635199_36635317_36637092_36637175_36637858
ES.34741.17	chr9	-	3204	13	NNC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_10	125.49930832036	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGGTCCTGTATTCCTT	620	False	NA	NA	False	ATTAAA	-14	NA	36637982	36620733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36634357_36635317_36637092_36637175_36637858
ES.34741.18	chr9	-	2290	12	NIC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-27	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	132.258762149391	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGGTCCTGTATTCCTT	694	False	NA	NA	False	ATTAAA	-14	NA	36637908	36620733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.19	chr9	-	4894	12	NNC	ENSMUSG00000032113.17	novel	2142	12	NA	NA	-16	1	intron_retention	FALSE	canonical	3	21	junction_10	131.00993590482	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	705	False	NA	NA	False	ATTAAA	-13	NA	36637897	36620734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36634357_36637175_36637858
ES.34741.2	chr9	-	4899	1	NIC	ENSMUSG00000111683.2	novel	725	5	NA	NA	1782	-50536	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCTCCAAACTTTGTC	NA	False	NA	NA	False	NA	NA	NA	36602483	36597584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36597600_36602500
ES.34741.22	chr9	-	5211	10	NIC	ENSMUSG00000032113.17	novel	2142	12	NA	NA	-10	1	intron_retention	FALSE	canonical	3	297	junction_9	61.3967063901278	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGTCCTGTATTCCT	711	False	NA	NA	False	ATTAAA	-13	NA	36637891	36620734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36637175_36637858
ES.34741.24	chr9	-	4978	12	NNC	ENSMUSG00000032113.17	novel	2142	12	NA	NA	-36	0	intron_retention	TRUE	non_canonical	0	0	junction_10	136.501142791814	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	685	False	NA	NA	False	ATTAAA	-12	NA	36637917	36620735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36636179_36636349_36637175_36637858
ES.34741.26	chr9	-	5405	31	Fusion	ENSMUSG00000032113.17_ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	0	multi-exon	FALSE	non_canonical	0	0	junction_13	703.457695166446	1418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	36678897	36620735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858_36638071_36643578_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.28	chr9	-	5470	8	NIC	ENSMUSG00000032113.17	novel	3797	12	NA	NA	1500	-1	intron_retention	FALSE	canonical	3	367	junction_6	37.8336854549229	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGGGGTCCTGTATTC	2943	False	NA	NA	False	ATTAAA	-11	NA	36635659	36620736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36629732_36630799_36630989_36633899
ES.34741.29	chr9	-	2215	12	FSM	ENSMUSG00000032113.17	ENSMUST00000174105.8	2142	12	-75	2	-2	-2	multi-exon	FALSE	canonical	3	20	junction_10	131.27033490643	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTGGGGTCCTGTATT	646	False	NA	NA	False	ATTAAA	-10	NA	36637956	36620737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ES.34741.30	chr9	-	4739	13	NNC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	166.50316980633	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTGGGGTCCTGTATT	686	False	NA	NA	False	ATTAAA	-10	NA	36637916	36620737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36634357_36636179_36636349_36637175_36637858
ES.34741.31	chr9	-	4482	29	Fusion	ENSMUSG00000032113.17_ENSMUSG00000032116.19	novel	3397	13	NA	NA	2	-2	multi-exon	FALSE	canonical	1	1	junction_12	691.640053069661	1418	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTGGGGTCCTGTATT	NA	False	NA	NA	False	ATTAAA	-10	NA	36678868	36620737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.32	chr9	-	5217	31	Fusion	ENSMUSG00000032113.17_ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-162	multi-exon	FALSE	canonical	0	0	junction_16	728.633217439032	1413	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTGAACTTATTGGCC	NA	False	NA	4	True	AATAAA	-21	NA	36678895	36620897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858_36638061_36643578_36644259_36645610_36645727_36646648_36646838_36652798_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.33	chr9	-	4791	12	NNC	ENSMUSG00000032113.17	novel	2142	12	NA	NA	-15	-166	intron_retention	FALSE	non_canonical	0	0	junction_10	136.501142791814	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAACTCTGAACTTATT	706	False	NA	0	True	AATAAA	-17	NA	36637896	36620901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36636179_36636349_36637175_36637858
ES.34741.35	chr9	-	2096	12	NIC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-9	-174	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	132.258762149391	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATATCTAACTCTG	712	False	NA	-8	True	AATAAA	-9	NA	36637890	36620909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.36	chr9	-	2218	13	NIC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	20	-174	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	126.81340185047	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATATCTAACTCTG	875	False	NA	-8	True	AATAAA	-9	NA	36637727	36620909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637678
ES.34741.37	chr9	-	2113	11	NNC	ENSMUSG00000032113.17	novel	3797	12	NA	NA	-566	-174	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_10	133.408732847591	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATATCTAACTCTG	3995	False	NA	-8	True	AATAAA	-9	NA	36634607	36620909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36634357
ES.34741.38	chr9	-	2017	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	58	1322	-15	353	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGTTTTAAATTGCAAA	706	False	NA	-17	True	TATAAA	-14	NA	36637896	36621099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.4	chr9	-	8664	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	24	-5291	24	5291	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCCTTCTCTTTCCTG	672	False	NA	NA	False	AATAAA	-19	NA	36637930	36614486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.40	chr9	-	1910	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	46	1441	-27	234	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTTCATGAATGAGG	694	False	NA	NA	False	AATAAA	-18	NA	36637908	36621218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.42	chr9	-	523	1	Intergenic	novelGene_28245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36639848	36639325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36639300_36639800
ES.34741.44	chr9	-	5182	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	69	616	-1	-616	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGTATGACACTTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	36678906	36641255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.45	chr9	-	5015	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	47	805	1	-805	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTCTATTCTTTGCC	NA	False	NA	NA	False	NA	NA	NA	36678928	36641444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.46	chr9	-	3305	5	Fusion	ENSMUSG00000062762.18_ENSMUSG00000032116.19	novel	5867	18	NA	NA	9	-828	multi-exon	FALSE	non_canonical	0	0	junction_2	746.804316738997	1468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCAGTTATTTTGA	NA	False	NA	NA	False	TATAAA	-27	NA	36708648	36641467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_36644259_36645610_36645729_36701075_36701222_36704535_36704646_36708508
ES.34741.47	chr9	-	4911	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	910	0	-910	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCAATGCATAGCTGGG	NA	False	NA	91	True	AATACA	-22	NA	36678929	36641549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.48	chr9	-	4839	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	16	-1002	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_17	428.551596179778	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTGATCTTTGCCAT	NA	False	NA	-1	True	NA	NA	NA	36678854	36641641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678750
ES.34741.49	chr9	-	4799	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	48	1020	2	-1020	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTTTACTGTTGTA	NA	False	NA	-19	True	NA	NA	NA	36678927	36641659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.5	chr9	-	3488	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	27	-118	27	118	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAATCAAGTTTTCA	675	False	NA	NA	False	AGTAAA	-22	NA	36637927	36619659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.50	chr9	-	4292	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	1529	0	-1529	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTATGTTTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	36678929	36642168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.51	chr9	-	4233	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-1533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.747351606107	1143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTGCCCTATGTTTTG	NA	False	NA	NA	False	NA	NA	NA	36678905	36642172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654742_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.52	chr9	-	3968	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	28	1871	-18	1211	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCCAGAGACTCTTGCTT	NA	False	NA	NA	False	AATAAA	-38	NA	36678947	36642510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.53	chr9	-	5193	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	1175	intron_retention	FALSE	canonical	3	1637	junction_6	109.548344778687	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACACACATGCCCACCC	NA	False	NA	NA	False	AATAAA	-25	NA	36678929	36642546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.54	chr9	-	3840	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	54	1973	-6	1109	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCAGTTGTAGTCTT	NA	False	NA	NA	False	NA	NA	NA	36678921	36642612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.55	chr9	-	3799	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	1053	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	436.503233280533	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGACTCCTGGGATCTT	NA	False	NA	NA	False	TATAAA	-23	NA	36678917	36642668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659201_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.56	chr9	-	3747	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	2074	0	1008	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTTCTCTATAGTAT	NA	False	NA	65	True	NA	NA	NA	36678929	36642713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.57	chr9	-	4005	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-48	942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	434.485512876614	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACTGCCTAGTGGGAA	NA	False	NA	-1	True	AATACA	-19	NA	36678694	36642779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678286
ES.34741.58	chr9	-	3671	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	1	940	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	435.544252456339	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTACTGCCTAGTGGG	NA	False	NA	-3	True	AATACA	-17	NA	36678928	36642781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670024_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.6	chr9	-	3326	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	72	-1	-1	1	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAGCTATATTTACAG	720	False	NA	NA	False	NA	NA	NA	36637882	36619776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.60	chr9	-	3580	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	2241	0	841	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTGTATGTACTGTG	NA	False	NA	-102	True	NA	NA	NA	36678929	36642880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.61	chr9	-	3466	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	2355	0	727	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTGTTTCTATTTAAG	NA	False	NA	NA	False	NA	NA	NA	36678929	36642994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.62	chr9	-	3084	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	72	2711	2	371	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGCTCATTTTCTCTA	NA	False	NA	NA	False	AGTAAA	-4	NA	36678903	36643350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.63	chr9	-	3096	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	-253	3024	-253	58	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTATGTTCTCGATGTC	NA	False	NA	39	True	AAGAAA	-19	NA	36679228	36643663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.64	chr9	-	2603	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	2	4	junction_16	440.210744984718	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGCTGTTTCTGGGCA	NA	False	NA	-4	True	NA	NA	NA	36678905	36643706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36678845
ES.34741.67	chr9	-	2159	13	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	20	15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	495.017248577147	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGCTGTTTCTGGGCA	NA	False	NA	-4	True	NA	NA	NA	36666143	36643706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657855_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101
ES.34741.71	chr9	-	2460	16	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	13	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	459.102815887199	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGTGCTGTTTCTGGG	NA	False	NA	-6	True	NA	NA	NA	36678905	36643708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36674632_36674694_36676349_36676477_36678845
ES.34741.72	chr9	-	2737	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	28	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	434.485512876614	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGTGCTGTTTCTGGG	NA	False	NA	-6	True	NA	NA	NA	36678842	36643708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678773
ES.34741.74	chr9	-	2552	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-1	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	450.068983427819	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGAGTGCTGTTTCTG	NA	False	NA	-8	True	NA	NA	NA	36678896	36643710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.76	chr9	-	2762	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_17	428.551596179778	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGACCAGAGGAGTGC	NA	False	NA	-16	True	NA	NA	NA	36678854	36643718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678750
ES.34741.77	chr9	-	2604	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	447.554426683225	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678897	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.78	chr9	-	2699	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	47	junction_13	424.829719602383	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678896	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666186_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.79	chr9	-	3846	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	434.485512876614	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678675	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36677484
ES.34741.8	chr9	-	3233	14	NNC	ENSMUSG00000032113.17	novel	3397	13	NA	NA	-9	-159	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	162.01497483568	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTAACAACTGTTTTT	712	False	NA	-7	True	TATAAA	-19	NA	36637890	36619936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36636556_36636616_36637092_36637175_36637858
ES.34741.80	chr9	-	2834	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	434.485512876614	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678695	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678516
ES.34741.81	chr9	-	2616	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	444.014846141151	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678928	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36674632_36674694_36676349_36676477_36678845
ES.34741.83	chr9	-	2654	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	443.621737625367	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678905	36643721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36676349_36676477_36678845
ES.34741.84	chr9	-	3221	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	434.485512876614	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTGGGACCAGAGG	NA	False	NA	-21	True	NA	NA	NA	36678854	36643723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678286
ES.34741.85	chr9	-	1096	6	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	770.700097314124	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36678917	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36674632_36674694_36676349_36676477_36678845
ES.34741.86	chr9	-	2217	14	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	492.9639496163	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36678879	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36674632_36674694_36676349_36676477_36678845
ES.34741.88	chr9	-	1885	3	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	31089	3088	18277	-6	3prime_fragment	FALSE	canonical	3	1820	junction_2	88.5	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36647886	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_36644259_36645610_36645727_36646648
ES.34741.89	chr9	-	4000	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	1637	junction_6	109.548344778687	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36678917	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.9	chr9	-	3200	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	38	159	-35	-159	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTAACAACTGTTTTT	686	False	NA	-7	True	TATAAA	-19	NA	36637916	36619936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ES.34741.91	chr9	-	2414	17	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	450.068983427819	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36678905	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36660970_36663695_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.92	chr9	-	2726	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	430.753166741046	1140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTCTGGGACCA	NA	False	NA	-25	True	NA	NA	NA	36678929	36643727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676356_36676477_36678845
ES.34741.93	chr9	-	4155	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-8	intron_retention	FALSE	canonical	3	1637	junction_6	105.783904139524	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAAATGTTTCTGGGAC	NA	False	NA	-27	True	NA	NA	NA	36678905	36643729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.97	chr9	-	2490	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	40	3337	-6	-255	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTTATTTGTTTTGAC	NA	False	NA	-4	True	ATTAAA	-24	NA	36678935	36643976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34741.98	chr9	-	2441	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	12	-258	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	436.729018149834	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTATTTGTTTT	NA	False	NA	-7	True	ATTAAA	-21	NA	36678883	36643979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661036_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ES.34742.1	chr9	-	296	1	Intergenic	novelGene_28249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTTTTTAAAAAGTT	6724	False	NA	NA	False	NA	NA	NA	36724338	36724042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36724000_36724300
ES.34742.2	chr9	-	155	1	Intergenic	novelGene_28250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAATAAT	6724	False	NA	NA	False	NA	NA	NA	36724338	36724183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36724200_36724300
ES.34743.1	chr9	+	1744	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	55	-5	-25	5	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTTTGGAGAGTGGT	NA	False	NA	23	True	AATAAA	-23	NA	36744034	36790225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ES.34743.2	chr9	+	1585	11	NNC	ENSMUSG00000032118.17	novel	1794	10	NA	NA	-18	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	27.3247140881657	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGTTTTTGGAGAGT	NA	False	NA	20	True	AATAAA	-20	NA	36744041	36790222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_36744208_36754957_36755018_36755166_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ES.34743.3	chr9	+	4320	9	NIC	ENSMUSG00000032118.17	novel	1794	10	NA	NA	-12	0	intron_retention	FALSE	canonical	3	83	junction_4	5.92531644724567	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCATGGTTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	36744047	36790216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ES.34743.5	chr9	+	1684	10	NNC	ENSMUSG00000032118.17	novel	1794	10	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.7470820230975	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCATGGTTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	36744077	36790216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_36744208_36754957_36755306_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ES.34744.1	chr9	-	186	1	Intergenic	novelGene_28251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAACATAACATTGCAC	NA	False	NA	NA	False	NA	NA	NA	36800278	36800092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_36800100_36800300
ES.34745.1	chr9	+	221	1	Intergenic	novelGene_28252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAGGAAGCTAAC	NA	False	NA	NA	False	NA	NA	NA	36814260	36814481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_36814300_36814500
ES.34746.1	chr9	-	4688	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	93	-1149	0	1149	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCTTAGCTAAATATACC	NA	False	NA	NA	False	AATAAA	-18	NA	37058610	36801128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ES.34746.10	chr9	-	3566	13	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	-14025	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.18602037910337	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTGATGCACAGTTC	NA	False	NA	-9	True	AGTAAA	-15	NA	37008630	36802281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37008525
ES.34746.11	chr9	-	3629	13	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	8.20018631224654	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTGATGCACAGTTC	NA	False	NA	-9	True	AGTAAA	-15	NA	36994548	36802281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36945785_36945978_36994502
ES.34746.12	chr9	-	3631	14	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.0530783558784	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTGATGCACAGTTC	NA	False	NA	-9	True	AGTAAA	-15	NA	37058586	36802281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36907070_36907191_36994502_36994573_37058536
ES.34746.2	chr9	-	4251	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	142	-761	1	761	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTTTATTGTCATCAT	NA	False	NA	NA	False	CATAAA	-15	NA	37058561	36801516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ES.34746.3	chr9	-	3573	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	62	-3	-23	3	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCACAGTTCTCTCTTC	NA	False	NA	-2	True	AGTAAA	-22	NA	37058641	36802274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ES.34746.4	chr9	-	3464	12	FSM	ENSMUSG00000035934.17	ENSMUST00000080754.12	3431	12	-30	-3	-22	0	multi-exon	FALSE	canonical	0	0	junction_10	6.78232998312527	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	-5	True	AGTAAA	-19	NA	37058640	36802277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36994502_36994573_37058536
ES.34746.5	chr9	-	3706	15	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.78232475186857	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	-5	True	AGTAAA	-19	NA	37058561	36802277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36835916_36835977_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37008525_37008682_37058536
ES.34746.6	chr9	-	3547	14	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.37154945256172	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTGATGCACAGTTCT	NA	False	NA	-8	True	AGTAAA	-16	NA	37058561	36802280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36835916_36835977_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ES.34746.8	chr9	-	3487	12	NNC	ENSMUSG00000035934.17	novel	3632	13	NA	NA	-17558	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.78841989185253	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTGATGCACAGTTCT	7497	False	NA	-8	True	AGTAAA	-16	NA	36916126	36802280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36916031
ES.34747.1	chr9	+	1179	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	-35	1475	-35	-1475	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTAGTGTTTGCTTAGA	NA	False	NA	56	True	NA	NA	NA	37119483	37134521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
ES.34747.2	chr9	+	1229	5	NNC	ENSMUSG00000032121.10	novel	2619	4	NA	NA	30	-1475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.9049726751344	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTAGTGTTTGCTTAGA	NA	False	NA	56	True	NA	NA	NA	37119548	37134521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37119702_37129561_37129673_37130497_37130601_37130934_37131050_37133774
ES.34747.3	chr9	+	1706	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	86	827	86	-827	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGGGTCGAGTCTGGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	37119604	37135169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
ES.34747.4	chr9	+	971	4	NNC	ENSMUSG00000032121.10	novel	2619	4	NA	NA	93	-1490	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	19.2527054375915	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTTATGTTTACATT	NA	False	NA	41	True	AATAAA	-39	NA	37119611	37134506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37119637_37129561_37129673_37130497_37130601_37133774
ES.34748.1	chr9	+	448	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGCAAGCTCAGTCG	NA	False	NA	NA	False	NA	NA	NA	37164217	37164665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37164200_37164700
ES.34748.2	chr9	+	321	1	FSM	ENSMUSG00000090136.5	ENSMUST00000161698.2	207	1	-49	-65	4	65	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGTGTGGTGTTTTGT	NA	False	NA	NA	False	AGTAAA	-11	NA	37164221	37164542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37164200_37164500
ES.34749.1	chr9	+	495	1	Intergenic	novelGene_28254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	37228317	37228812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37228300_37228800
ES.3475.1	chr10	-	5477	2	Antisense	novelGene_ENSMUSG00000034453.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGCCATCTTATTACA	NA	False	NA	NA	False	NA	NA	NA	84470953	84465370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84470224_84470329
ES.34750.1	chr9	-	5630	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	313	0	-11	0	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGACATATGCTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	37166721	37138880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.10	chr9	-	4676	16	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	4	-76	intron_retention	FALSE	canonical	3	62	junction_12	7.19073477933004	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTGCTTATCCTTGGT	NA	False	NA	-2	True	AATACA	-19	NA	37166706	37141883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.11	chr9	-	3337	17	NIC	ENSMUSG00000032122.16	novel	5943	18	NA	NA	25	-78	intron_retention	FALSE	canonical	3	62	junction_1	7.17607788070893	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCACTGCTTATCCTTG	NA	False	NA	-4	True	AATACA	-17	NA	37166685	37141885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.13	chr9	-	6126	14	NIC	ENSMUSG00000032122.16	novel	5943	18	NA	NA	62	-81	intron_retention	FALSE	canonical	3	62	junction_10	7.34444200755693	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCCACTGCTTATCC	NA	False	NA	-7	True	AATACA	-14	NA	37166972	37141888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.14	chr9	-	2152	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	92	3699	92	-772	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATGAGGGATTTCACCT	NA	False	NA	NA	False	TATAAA	-19	NA	37166942	37142579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.15	chr9	-	2015	19	NNC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	-9	-772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	27.2408099805248	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATGAGGGATTTCACCT	NA	False	NA	NA	False	TATAAA	-19	NA	37166719	37142579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37142953_37144348_37144406_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149708_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.16	chr9	-	3810	10	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	-3609	-773	intron_retention	FALSE	canonical	3	65	junction_8	7.35014907046277	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTATGAGGGATTTCACC	NA	False	NA	NA	False	TATAAA	-18	NA	37150059	37142580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032
ES.34750.17	chr9	-	3565	17	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	6	-774	intron_retention	FALSE	canonical	3	62	junction_13	6.96307223860273	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTATGAGGGATTTCAC	NA	False	NA	NA	False	TATAAA	-17	NA	37166704	37142581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.18	chr9	-	1854	17	ISM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	329	5413	5	-2486	5prime_fragment	FALSE	canonical	3	62	junction_13	6.96307223860273	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCGCTCCTCTCCTGCGT	NA	False	NA	NA	False	NA	NA	NA	37166705	37144293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.19	chr9	-	7321	1	Antisense	novelGene_ENSMUSG00000111681.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTCTGTTTCAT	NA	False	NA	-1	True	NA	NA	NA	37186079	37178758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_37178800_37186100
ES.34750.2	chr9	-	4766	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	245	932	-79	-932	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGTGAAGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	37166789	37139812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.20	chr9	-	7494	16	FSM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	-1	-3968	-1	3968	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGTTTAGTTTCAGTC	NA	False	NA	NA	False	AGTAAA	-40	NA	37259689	37183162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.21	chr9	-	7146	15	NIC	ENSMUSG00000034303.9	novel	3331	16	NA	NA	2	3941	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	5.94575822047336	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCATTGAATATCATTAC	NA	False	NA	NA	False	AGTAAA	-13	NA	37259726	37183189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37187862_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.23	chr9	-	7084	16	FSM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	51	-3804	0	3804	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGTATTGACTTTTA	NA	False	NA	-1	True	AATACA	-17	NA	37259677	37183326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.26	chr9	-	6957	15	NIC	ENSMUSG00000034303.9	novel	3331	16	NA	NA	-1	3800	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	5.94575822047336	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATACTTTGTATTGACT	NA	False	NA	-5	True	AATACA	-13	NA	37259678	37183330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37187862_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.27	chr9	-	4306	16	NNC	ENSMUSG00000034303.9	novel	3525	16	NA	NA	304	1123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.01627422542852	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGCTGTACTATTTTT	NA	False	NA	NA	False	NA	NA	NA	37259349	37186007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215699_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.28	chr9	-	4000	15	ISM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	582	-947	547	947	3prime_fragment	FALSE	canonical	2	5	junction_9	5.48513761849943	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCACTAGTAGACATTT	NA	False	NA	NA	False	NA	NA	NA	37259106	37186183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033
ES.34750.29	chr9	-	3805	13	NIC	ENSMUSG00000034303.9	novel	3525	16	NA	NA	0	751	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	6.31301565550622	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATCATTAATCTATTT	NA	False	NA	NA	False	NA	NA	NA	37259677	37186379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37187862_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37259033_37259220_37259329
ES.34750.3	chr9	-	3895	17	NNC	ENSMUSG00000032122.16	novel	5943	18	NA	NA	4	1165	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	24.3534359742111	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCTCCTTTAGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	37166706	37140446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153161_37153257_37166594
ES.34750.30	chr9	-	3292	15	NNC	ENSMUSG00000034303.9	novel	3525	16	NA	NA	73	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.57298118304419	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGCTATTCCTCATC	NA	False	NA	NA	False	AATAAA	-21	NA	37259580	37187128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37187862_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215699_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.31	chr9	-	3280	16	FSM	ENSMUSG00000034303.9	ENSMUST00000213633.2	3331	16	51	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGTTGCTATTCCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	37259677	37187130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.32	chr9	-	3403	15	NIC	ENSMUSG00000034303.9	novel	3525	16	NA	NA	3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	6.8332918532008	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTGTTGCTATTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	37259681	37187131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37187862_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253721_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.33	chr9	-	3523	16	FSM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	-5	7	-5	-7	multi-exon	FALSE	canonical	2	5	junction_9	5.33166640616859	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGCTTCTGTTGCTA	NA	False	NA	NA	False	AATAAA	-12	NA	37259693	37187137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37187862_37188653_37188778_37190262_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.34	chr9	-	2712	14	ISM	ENSMUSG00000034303.9	ENSMUST00000239439.2	3525	16	22	3068	11	-3068	5prime_fragment	FALSE	canonical	2	5	junction_7	5.28366915725366	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAGAATTTTATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	37259666	37190198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_37190412_37190869_37191047_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37231692_37231807_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.35	chr9	-	212	1	Intergenic	novelGene_28253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTTTACTAACCAGT	NA	False	NA	NA	False	NA	NA	NA	37191490	37191278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_37191300_37191500
ES.34750.36	chr9	-	2848	6	NNC	ENSMUSG00000034303.9	novel	3180	8	NA	NA	2	-1058	intron_retention	FALSE	non_canonical	0	0	junction_2	9.15204895091804	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCACTCAAATGGCAGTT	NA	False	NA	NA	False	AATAAA	-3	NA	37259682	37225335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37227184_37227703_37227824_37253731_37253923_37255179_37255330_37259033_37259220_37259329
ES.34750.37	chr9	-	3512	5	NNC	ENSMUSG00000034303.9	novel	1669	4	NA	NA	-1	5841	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.17960354715414	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGATTGCTGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	37259654	37246864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37249764_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.38	chr9	-	2040	5	NNC	ENSMUSG00000034303.9	novel	1747	4	NA	NA	1	4106	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.17960354715414	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGATCTATGAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	37259683	37248599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37249764_37253731_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.39	chr9	-	1782	5	NNC	ENSMUSG00000034303.9	novel	1669	4	NA	NA	-12	4105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6.51920240520265	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAGATCTATGAGTTGA	NA	False	NA	NA	False	NA	NA	NA	37259665	37248600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37249764_37253731_37253918_37255179_37255330_37259038_37259220_37259563
ES.34750.4	chr9	-	4347	16	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	29	2	intron_retention	FALSE	canonical	1	1	junction_10	19.0846069443995	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTGGTTCTCACTTT	NA	False	NA	-1	True	AATAAA	-12	NA	37166681	37141609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.40	chr9	-	3811	1	NIC	ENSMUSG00000034303.9	novel	3525	16	NA	NA	4108	971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTTGGGTC	-4	True	NA	NA	False	NA	NA	NA	37255545	37251734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37251700_37255500
ES.34750.41	chr9	-	2024	4	FSM	ENSMUSG00000034303.9	ENSMUST00000217238.3	1747	4	-15	-262	9	137	multi-exon	FALSE	canonical	3	11	junction_3	4.92160768674447	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACCATGTGAAAACAAA	NA	False	NA	NA	False	AAGAAA	-17	NA	37259668	37252568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.42	chr9	-	1557	4	NNC	ENSMUSG00000034303.9	novel	1669	4	NA	NA	-9	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.8770215933527	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTCCCATCCAGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	37259697	37252717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37253918_37255179_37255330_37259033_37259220_37259676
ES.34750.43	chr9	-	1774	4	FSM	ENSMUSG00000034303.9	ENSMUST00000217238.3	1747	4	-28	1	3	-1	multi-exon	FALSE	canonical	3	11	junction_3	4.92160768674447	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCAGGTAATAATCT	NA	False	NA	NA	False	AATAAA	-12	NA	37259681	37252831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37253918_37255179_37255330_37259033_37259220_37259329
ES.34750.5	chr9	-	2921	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	293	2729	-31	2	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTGGTTCTCACTTT	NA	False	NA	-1	True	AATAAA	-12	NA	37166741	37141609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.6	chr9	-	2744	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	284	2915	-40	12	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTGTTCTGGGGCTGC	NA	False	NA	86	True	AGTAAA	-23	NA	37166750	37141795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.7	chr9	-	4564	28	Fusion	ENSMUSG00000032122.16_ENSMUSG00000034303.9	novel	2945	19	NA	NA	0	3	multi-exon	FALSE	canonical	0	0	junction_17	30.2312078145404	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAAAGATTGGTGTTC	NA	False	NA	77	True	AGTAAA	-14	NA	37259677	37141804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37214175_37214280_37215605_37215702_37222613_37222725_37224672_37224796_37225582_37225649_37226454_37227184_37227703_37227824_37253731_37253918_37255179_37255330_37259033_37259220_37259563
ES.34750.8	chr9	-	4376	17	NIC	ENSMUSG00000032122.16	novel	2945	19	NA	NA	-28	3	intron_retention	FALSE	canonical	3	62	junction_13	6.96307223860273	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACAAAGATTGGTGTTC	NA	False	NA	77	True	AGTAAA	-14	NA	37166738	37141804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34750.9	chr9	-	3356	16	NIC	ENSMUSG00000032122.16	novel	5943	18	NA	NA	-15	-76	intron_retention	FALSE	canonical	3	62	junction_1	7.50703373880493	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTGCTTATCCTTGGT	NA	False	NA	-2	True	AATACA	-19	NA	37166725	37141883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ES.34751.1	chr9	+	181	1	Intergenic	novelGene_28255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAGAATGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	37285442	37285623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37285400_37285600
ES.34752.1	chr9	-	174	1	Intergenic	novelGene_28256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	37300720	37300546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_37300500_37300700
ES.34753.1	chr9	-	164	1	Intergenic	novelGene_28257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	37305518	37305354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_37305400_37305500
ES.34754.1	chr9	+	3743	18	FSM	ENSMUSG00000032125.22	ENSMUST00000214185.3	4952	18	116	1093	-19	0	multi-exon	FALSE	canonical	0	0	junction_2	1.10988013318313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGTGACATCATTCCT	NA	False	NA	NA	False	TATAAA	-13	NA	37313308	37325318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37313448_37313850_37314184_37314447_37314606_37314738_37314860_37315369_37315498_37315588_37315818_37316066_37316180_37316868_37317038_37317193_37317380_37317484_37317528_37319233_37319371_37319468_37319733_37321677_37321786_37321974_37322135_37322275_37322519_37322640_37323000_37324324_37324532_37324672
ES.34754.2	chr9	+	3711	18	FSM	ENSMUSG00000032125.22	ENSMUST00000239486.2	3689	18	-25	3	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08465228909328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTTCTGTGACATCATT	NA	False	NA	NA	False	TATAAA	-10	NA	37313316	37325315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37313448_37313850_37314184_37314447_37314606_37314738_37314860_37315369_37315498_37315588_37315818_37316066_37316180_37316868_37317038_37317193_37317380_37317484_37317528_37319233_37319371_37319468_37319733_37321677_37321786_37321995_37322135_37322275_37322519_37322640_37323000_37324324_37324532_37324672
ES.34755.1	chr9	-	536	2	ISM	ENSMUSG00000032128.16	ENSMUST00000167089.8	2226	5	1986	377	1913	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTTTGAATTTCTG	NA	False	NA	NA	False	AATACA	-14	NA	37328174	37327341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_37327696_37327992
ES.34756.1	chr9	+	184	1	Intergenic	novelGene_28258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATTACTTAAA	NA	False	NA	NA	False	NA	NA	NA	37360192	37360376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37360200_37360400
ES.34757.1	chr9	-	180	1	Intergenic	novelGene_28259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTACCT	NA	False	NA	NA	False	NA	NA	NA	37379652	37379472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_37379500_37379700
ES.34758.1	chr9	+	176	1	Intergenic	novelGene_28260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACAAACAAACAAAC	7331	False	NA	NA	False	NA	NA	NA	37393280	37393456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37393300_37393500
ES.34759.1	chr9	+	158	1	Intergenic	novelGene_28261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	37396127	37396285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37396100_37396300
ES.3476.1	chr10	-	158	1	Intergenic	novelGene_2670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	84479481	84479323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84479300_84479500
ES.34760.1	chr9	+	279	1	Intergenic	novelGene_28263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37397367	37397646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_37397400_37397600
ES.34761.1	chr9	+	4562	4	FSM	ENSMUSG00000042138.10	ENSMUST00000239459.2	2591	4	-8	-1963	-8	1488	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCCTCTTGACTGGTGT	89	False	NA	NA	False	NA	NA	NA	37400308	37437409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ES.34761.10	chr9	+	5961	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-29	36	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	366	False	NA	NA	False	TTTAAA	-43	NA	37400585	37435482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
ES.34761.11	chr9	+	2364	5	NNC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-22	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.419104056143	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTTTTGTAGCGG	373	False	NA	NA	False	NA	NA	NA	37400592	37435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37424909_37425069_37428668_37428769_37430022_37430084_37433985
ES.34761.12	chr9	+	6065	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-19	36	intron_retention	FALSE	canonical	3	20	junction_1	105.264844558855	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	376	False	NA	NA	False	TTTAAA	-43	NA	37400595	37435482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37402751_37402866_37424909_37428769_37430022_37430084_37433985
ES.34761.13	chr9	+	2549	6	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-18	34	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	105.545440451021	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGTGCTAGTTGAGC	377	False	NA	NA	False	TTTAAA	-41	NA	37400596	37435480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37402751_37402866_37424909_37425000_37428512_37428769_37430022_37430084_37433985
ES.34761.14	chr9	+	1979	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-299	-1257	-18	-174	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCACAGTAAATACAGCT	377	False	NA	NA	False	AATAAA	-28	NA	37400596	37435270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ES.34761.15	chr9	+	6163	6	NNC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-17	33	intron_retention	FALSE	canonical	0	0	junction_2	109.909781184388	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTGTGCTAGTTGAG	378	False	NA	NA	False	TTTAAA	-40	NA	37400597	37435479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37402751_37402866_37403021_37403125_37424909_37428769_37430022_37430084_37433985
ES.34761.16	chr9	+	2325	5	NNC	ENSMUSG00000042138.10	novel	423	4	NA	NA	-17	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.419104056143	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGTGCTAGTTGAGC	378	False	NA	NA	False	TTTAAA	-41	NA	37400597	37435480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37424909_37425047_37428668_37428769_37430022_37430084_37433985
ES.34761.17	chr9	+	2368	6	NNC	ENSMUSG00000042138.10	novel	2289	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.651582266744	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	379	False	NA	NA	False	TTTAAA	-5	NA	37400598	37435444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37402751_37402866_37424909_37425000_37428655_37428769_37430022_37430084_37433985
ES.34761.18	chr9	+	2088	3	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-16	35	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	110.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	379	False	NA	NA	False	TTTAAA	-42	NA	37400598	37435481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37430022_37430084_37433985
ES.34761.19	chr9	+	2427	6	NIC	ENSMUSG00000042138.10	novel	2289	4	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	104.870586915493	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	379	False	NA	NA	False	TTTAAA	-5	NA	37400598	37435444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37402679_37402866_37424909_37425000_37428668_37428769_37430022_37430084_37433985
ES.34761.2	chr9	+	2452	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-559	-1470	20	37	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGCTAGTTGAGCCTT	117	False	NA	NA	False	TTTAAA	-44	NA	37400336	37435483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ES.34761.20	chr9	+	4132	3	NNC	ENSMUSG00000042138.10	novel	460	3	NA	NA	-16	-1680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATGCATTTGAAATAGT	379	False	NA	NA	False	AGTAAA	-26	NA	37400598	37428368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37411523_37411666_37424909
ES.34761.21	chr9	+	2368	6	NNC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.488577580703	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAT	380	False	NA	NA	False	TTTAAA	-3	NA	37400599	37435442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37424909_37425046_37428512_37428597_37428668_37428769_37430022_37430084_37433985
ES.34761.22	chr9	+	6133	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	-15	36	intron_retention	FALSE	canonical	1	4	junction_1	109.410637051431	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	380	False	NA	NA	False	TTTAAA	-43	NA	37400599	37435482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37402679_37402866_37424909_37428769_37430022_37430084_37433985
ES.34761.23	chr9	+	4009	5	NIC	ENSMUSG00000042138.10	novel	2165	4	NA	NA	-12	34	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	103.544676347942	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGTGCTAGTTGAGC	383	False	NA	NA	False	TTTAAA	-41	NA	37400602	37435480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37402866_37424909_37425000_37428668_37428769_37430022_37430084_37433985
ES.34761.24	chr9	+	2249	5	NNC	ENSMUSG00000042138.10	novel	2289	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.419104056143	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	384	False	NA	NA	False	TTTAAA	-5	NA	37400603	37435444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37424909_37425000_37428655_37428769_37430022_37430084_37433985
ES.34761.25	chr9	+	2385	5	NIC	ENSMUSG00000042138.10	novel	2289	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	103.639700404816	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	391	False	NA	NA	False	TTTAAA	-5	NA	37400610	37435444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37424909_37425000_37428512_37428769_37430022_37430084_37433985
ES.34761.26	chr9	+	1855	5	NNC	ENSMUSG00000042138.10	novel	2165	4	NA	NA	1	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	114.027408985735	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGGGTGTGCTAGTT	396	False	NA	NA	False	TTTAAA	-37	NA	37400615	37435476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37400683_37424909_37425046_37428668_37428769_37430022_37430084_37433985
ES.34761.27	chr9	+	5643	5	NNC	ENSMUSG00000042138.10	novel	742	3	NA	NA	157	35	intron_retention	FALSE	canonical	0	0	junction_1	110.490667026677	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	1052	False	NA	NA	False	TTTAAA	-42	NA	37401271	37435481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401313_37402679_37402866_37424909_37428769_37430022_37430084_37433985
ES.34761.28	chr9	+	6437	3	FSM	ENSMUSG00000042138.10	ENSMUST00000213411.2	742	3	-4516	-1179	-4516	35	multi-exon	FALSE	canonical	3	228	junction_2	2.5	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	NA	False	NA	NA	False	TTTAAA	-42	NA	37423888	37435481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37428769_37430022_37430084_37433985
ES.34761.29	chr9	+	6935	2	NIC	ENSMUSG00000042138.10	novel	742	3	NA	NA	-3780	15	intron_retention	FALSE	canonical	3	228	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGAATTCCTGACTTC	NA	False	NA	NA	False	TTTAAA	-22	NA	37424624	37435461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37430084_37433985
ES.34761.3	chr9	+	7956	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	20	46	intron_retention	FALSE	canonical	3	20	junction_1	99.2516442628982	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGAGCCTTTTGTAGCGG	117	False	NA	NA	False	NA	NA	NA	37400336	37435492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37402866_37424909_37428769_37430022_37430084_37433985
ES.34761.4	chr9	+	2672	6	NNC	ENSMUSG00000042138.10	novel	423	4	NA	NA	49	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.651582266744	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCTAGTTGAGCCT	146	False	NA	NA	False	TTTAAA	-43	NA	37400365	37435482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37401130_37402751_37402866_37424909_37425046_37428668_37428769_37430022_37430084_37433985
ES.34761.5	chr9	+	4240	2	ISM	ENSMUSG00000042138.10	ENSMUST00000211792.2	231	4	-747	1661	51	-1661	5prime_fragment	FALSE	canonical	3	44	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTAACAATGTGTC	148	False	NA	NA	False	AGTAAA	-45	NA	37400367	37428387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_37401130_37424909
ES.34761.6	chr9	+	2470	5	NIC	ENSMUSG00000042138.10	novel	2289	4	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	97.7010747126151	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	150	False	NA	NA	False	TTTAAA	-5	NA	37400369	37435444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37424909_37425000_37428668_37428769_37430022_37430084_37433985
ES.34761.7	chr9	+	4317	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-504	-3390	75	1482	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAACACGTCCTCTTGAC	172	False	NA	NA	False	NA	NA	NA	37400391	37437403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ES.34761.8	chr9	+	5908	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	112	-172	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAGTAAATACAGCTGT	209	False	NA	NA	False	AATAAA	-30	NA	37400428	37435272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
ES.34761.9	chr9	+	2357	4	FSM	ENSMUSG00000042138.10	ENSMUST00000048604.8	2291	4	-31	-35	-29	35	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGTGCTAGTTGAGCC	366	False	NA	NA	False	TTTAAA	-42	NA	37400585	37435481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ES.34762.1	chr9	-	2726	1	Intergenic	novelGene_28262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATATACACTATGTGA	NA	False	NA	NA	False	AATAAA	-41	NA	37399766	37397040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_37397000_37399800
ES.34762.2	chr9	-	2003	1	Antisense	novelGene_ENSMUSG00000042138.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTTTAGTTTTATGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	37401270	37399267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_37399300_37401300
ES.34762.3	chr9	-	1269	1	Antisense	novelGene_ENSMUSG00000042138.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTATCTATAATGGGG	NA	False	NA	NA	False	AGTAAA	-17	NA	37401152	37399883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_37399900_37401200
ES.34763.1	chr9	-	5099	2	Antisense	novelGene_ENSMUSG00000110993.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGTAGAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	37411383	37403698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_37403986_37406571
ES.34763.2	chr9	-	4430	1	Antisense	novelGene_ENSMUSG00000110993.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCTTTGTTTATCTG	NA	False	NA	NA	False	NA	NA	NA	37411383	37406953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_37407000_37411400
ES.34764.1	chr9	+	1841	7	FSM	ENSMUSG00000001946.15	ENSMUST00000002011.14	1865	7	15	9	15	-9	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAGAAGTAATTGAATC	5197	False	NA	NA	False	AATAAA	-19	NA	37439388	37449606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37439587_37442783_37442972_37445448_37445651_37445833_37445990_37447893_37448017_37448301_37448429_37448759
ES.34765.1	chr9	+	1155	7	FSM	ENSMUSG00000001943.9	ENSMUST00000002008.7	1166	7	10	1	10	-1	multi-exon	FALSE	canonical	0	0	junction_1	3.13138237134266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGTTCTCCTTTCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	37450560	37455496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37450735_37451164_37451323_37451589_37451798_37452622_37452782_37453650_37453771_37453884_37454030_37455305
ES.34765.2	chr9	+	1348	6	ISM	ENSMUSG00000001943.9	ENSMUST00000002008.7	1166	7	247	1	208	-1	3prime_fragment	FALSE	canonical	2	5	junction_5	1.62480768092719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCGTTCTCCTTTCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	37450797	37455496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_37451323_37451589_37451798_37452622_37452782_37453650_37453771_37453884_37454030_37455305
ES.34765.3	chr9	+	1178	5	NIC	ENSMUSG00000001943.9	novel	1166	7	NA	NA	218	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3.39116499156263	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCGTTCTCCTTTCTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	37450807	37455495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_37451323_37451589_37451798_37453650_37453771_37453884_37454030_37455305
ES.34765.4	chr9	+	5828	1	Genic_Genomic	ENSMUSG00000001943.9	novel	NA	NA	NA	NA	-115	2779	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGAGATGGCTCAGC	NA	False	NA	NA	False	GATAAA	-44	NA	37452452	37458280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_37452500_37458300
ES.34766.1	chr9	-	1259	3	NNC	ENSMUSG00000053310.12	novel	1453	4	NA	NA	192	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGGGTGCAGGGTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	37464008	37455788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37456645_37457243_37457471_37463832
ES.34766.2	chr9	-	787	3	NNC	ENSMUSG00000053310.12	novel	1453	4	NA	NA	202	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAAAAG	NA	False	NA	-46	True	NA	NA	NA	37463998	37456250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37456645_37457243_37457471_37463832
ES.34766.3	chr9	-	646	3	NNC	ENSMUSG00000053310.12	novel	1453	4	NA	NA	200	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAAAAG	NA	False	NA	-46	True	NA	NA	NA	37464000	37456250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37456628_37457369_37457471_37463832
ES.34767.1	chr9	-	6586	3	NIC	ENSMUSG00000001948.11	novel	696	5	NA	NA	0	-4	intron_retention	FALSE	canonical	2	7	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTTGTGGTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	37525018	37514589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37514783_37517088_37523315_37524851
ES.34768.1	chr9	+	4228	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	118	601	-39	-601	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGCTTATTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	37525083	37560350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.10	chr9	+	3623	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	167	1157	10	243	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAATGTAGGCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	37525132	37559794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.11	chr9	+	7132	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	171	-2356	14	2356	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGCACAATGCTAAGT	NA	False	NA	NA	False	NA	NA	NA	37525136	37563307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.12	chr9	+	1583	10	NNC	ENSMUSG00000001942.9	novel	4947	10	NA	NA	14	-523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.1225446940881	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCAGTATGTTGCCAGC	NA	False	NA	NA	False	AATATA	-21	NA	37525136	37557760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544918_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.15	chr9	+	2689	1	Genic_Genomic	ENSMUSG00000001942.9	novel	NA	NA	NA	NA	6294	2007	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATGAGATACACTGC	4571	False	NA	NA	False	AGTAAA	-16	NA	37560269	37562958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_37560300_37563000
ES.34768.2	chr9	+	3493	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	146	1308	-11	92	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTTTGTTTGTTTTC	NA	False	NA	NA	False	AAAAAG	-23	NA	37525111	37559643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.3	chr9	+	5382	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	152	-587	-5	587	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCAGGTTATTATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	37525117	37561538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.5	chr9	+	6926	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	157	-2136	0	2136	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCAAGCTGCATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	37525122	37563087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.6	chr9	+	3253	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	158	1536	1	-136	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTGTGGGGATTG	NA	False	NA	NA	False	AATGAA	-39	NA	37525123	37559415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.7	chr9	+	1738	9	ISM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	158	4400	1	-1	5prime_fragment	FALSE	canonical	3	33	junction_7	7.74495803732983	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAACCTTGGTTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	37525123	37556551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047
ES.34768.8	chr9	+	5651	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	158	-862	1	862	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCCAGGGTATATATGT	NA	False	NA	NA	False	ACTAAA	-5	NA	37525123	37561813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34768.9	chr9	+	4809	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	158	-20	1	20	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACTCTGGTGATTTGT	NA	False	NA	NA	False	NA	NA	NA	37525123	37560971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ES.34769.1	chr9	-	1553	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	32	399	32	20	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGGGATATGATCATTTT	NA	False	NA	0	True	AATAAA	-38	NA	37568576	37560457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.10	chr9	-	1380	8	NIC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	32	-6	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	581.714671624907	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGGTTATTTGTTTCT	NA	False	NA	-26	True	AATAAA	-12	NA	37568576	37560483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.11	chr9	-	5643	3	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	-25	-6	intron_retention	FALSE	canonical	3	1703	junction_2	11.5	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGGTTATTTGTTTCT	NA	False	NA	-26	True	AATAAA	-12	NA	37568558	37560483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37566389_37568293
ES.34769.12	chr9	-	2757	6	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	3	-6	intron_retention	FALSE	canonical	3	1493	junction_3	113.942090554808	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGGTTATTTGTTTCT	NA	False	NA	-26	True	AATAAA	-12	NA	37568530	37560483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562684_37563910_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.14	chr9	-	4832	5	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	-30	-7	intron_retention	FALSE	canonical	3	1666	junction_2	67.4291294619766	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCGGTTATTTGTTTC	NA	False	NA	-27	True	AATAAA	-11	NA	37568563	37560484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562356_37562585_37565733_37566317_37566389_37568293
ES.34769.15	chr9	-	3384	6	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	1	-7	intron_retention	FALSE	canonical	3	1638	junction_2	32.3233661613391	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCGGTTATTTGTTTC	NA	False	NA	-27	True	AATAAA	-11	NA	37568532	37560484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37566389_37568293
ES.34769.16	chr9	-	5559	3	FSM	ENSMUSG00000011114.19	ENSMUST00000126062.2	823	3	-69	-4667	0	-7	multi-exon	FALSE	canonical	3	1703	junction_2	71.5	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTCGGTTATTTGTTTC	NA	False	NA	-27	True	AATAAA	-11	NA	37568533	37560484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37565733_37566317_37566389_37568293
ES.34769.17	chr9	-	1485	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	566.359426512881	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTCGGTTATTTGTTT	NA	False	NA	-28	True	AATAAA	-10	NA	37568530	37560485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562690_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.2	chr9	-	1764	8	FSM	ENSMUSG00000011114.19	ENSMUST00000142736.9	1761	8	1	-4	1	4	multi-exon	FALSE	canonical	3	1493	junction_5	98.6130346974724	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTCTTCTTGTAGTC	NA	False	NA	-16	True	AATAAA	-22	NA	37568532	37560473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.20	chr9	-	5031	4	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	0	-8	intron_retention	FALSE	canonical	3	1703	junction_3	62.6968012652072	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTCGGTTATTTGTTT	NA	False	NA	-28	True	AATAAA	-10	NA	37568533	37560485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37565733_37566317_37566389_37568293
ES.34769.21	chr9	-	1512	9	NNC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	733.319922936095	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTCGGTTATTTGTT	NA	False	NA	-29	True	AATAAA	-9	NA	37568533	37560486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564324_37564466_37565511_37565733_37566317_37566416_37568293
ES.34769.23	chr9	-	1182	3	FSM	ENSMUSG00000011114.19	ENSMUST00000126062.2	823	3	-65	-294	4	294	multi-exon	FALSE	canonical	3	1703	junction_2	71.5	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37568529	37564857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_37565733_37566317_37566389_37568293
ES.34769.24	chr9	-	1762	2	ISM	ENSMUSG00000011114.19	ENSMUST00000134711.2	2294	3	-70	1648	9	294	5prime_fragment	FALSE	canonical	3	1703	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37568524	37564857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_37566389_37568293
ES.34769.4	chr9	-	1482	9	NNC	ENSMUSG00000011114.19	novel	1984	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	565.61001361362	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_37560792_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.5	chr9	-	4313	4	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	5	0	intron_retention	FALSE	canonical	3	1703	junction_3	9.46337971105226	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568449	37560477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562684_37563910_37566389_37568293
ES.34769.6	chr9	-	3757	6	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	3	-3	intron_retention	FALSE	canonical	3	1493	junction_3	114.135708698023	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTATTTGTTTCTTCT	NA	False	NA	-23	True	AATAAA	-15	NA	37568530	37560480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562356_37562585_37564466_37565511_37565733_37566317_37566389_37568293
ES.34769.7	chr9	-	3863	5	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	19	-5	intron_retention	FALSE	canonical	3	1703	junction_4	57.8851233046972	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568589	37560482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562684_37563910_37565733_37566317_37566389_37568293
ES.34769.8	chr9	-	2800	7	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	2	-5	intron_retention	FALSE	canonical	3	1638	junction_2	65.5296794505275	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568531	37560482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37565733_37566317_37566389_37568293
ES.34769.9	chr9	-	3618	6	NIC	ENSMUSG00000011114.19	novel	1761	8	NA	NA	34	-5	intron_retention	FALSE	canonical	3	1666	junction_2	61.0232742484374	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTTATTTGTTTCTT	NA	False	NA	-25	True	AATAAA	-13	NA	37568574	37560482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_37560800_37561326_37562356_37562585_37562684_37563910_37565733_37566317_37566389_37568293
ES.3477.1	chr10	-	1849	1	Antisense	novelGene_ENSMUSG00000034453.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGACCCTGGTTACAC	NA	False	NA	NA	False	NA	NA	NA	84490285	84488436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84488400_84490300
ES.3477.2	chr10	-	5174	2	Antisense	novelGene_ENSMUSG00000034453.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-43	NA	84496788	84488463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84488658_84491808
ES.34770.1	chr9	+	178	1	ISM	ENSMUSG00000096356.4	ENSMUST00000217286.2	5673	2	2430	3440	1936	1078	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38028923	38029101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_38028900_38029100
ES.34771.1	chr9	+	561	1	FSM	ENSMUSG00000052058.4	ENSMUST00000063716.2	936	1	616	-241	616	241	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGTTGTTAATTC	NA	False	NA	NA	False	NA	NA	NA	38342195	38342756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38342200_38342800
ES.34772.1	chr9	+	3915	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	-14	256	-14	-256	multi-exon	TRUE	canonical	2	10	junction_6	2.97449918967259	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTCTGGGATATATAA	NA	False	NA	NA	False	NA	NA	NA	38629549	38654377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.2	chr9	+	3637	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	3	517	-1	58	multi-exon	FALSE	canonical	2	10	junction_6	2.97449918967259	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTAAGTGCAAATTGCT	NA	False	NA	NA	False	NA	NA	NA	38629566	38654116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.3	chr9	+	5236	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	28	-1107	24	1107	multi-exon	FALSE	canonical	2	10	junction_6	2.97449918967259	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCGAGTTCAAGTTCTCT	NA	False	NA	NA	False	AATACA	-17	NA	38629591	38655740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.4	chr9	+	3384	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	34	739	30	-164	multi-exon	FALSE	canonical	2	10	junction_6	2.97449918967259	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAATCTCACTGAGGC	NA	False	NA	NA	False	NA	NA	NA	38629597	38653894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.5	chr9	+	3160	19	FSM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	30	312	30	-312	multi-exon	FALSE	canonical	0	0	junction_1	4.43645114538998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTAAGATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38629597	38653746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.6	chr9	+	3710	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	37	410	33	165	multi-exon	FALSE	canonical	2	10	junction_6	2.97449918967259	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTGGGAATAC	NA	False	NA	NA	False	NA	NA	NA	38629600	38654223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.7	chr9	+	3801	19	FSM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	48	-347	48	-228	multi-exon	FALSE	canonical	0	0	junction_1	4.43645114538998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATGTTGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	38629615	38654405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.8	chr9	+	3299	19	FSM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	53	150	53	-150	multi-exon	FALSE	canonical	0	0	junction_1	4.43645114538998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTGGACTGCTCCTGA	NA	False	NA	NA	False	NA	NA	NA	38629620	38653908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_38629684_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34772.9	chr9	+	3990	19	ISM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	768	269	-2	-269	3prime_fragment	FALSE	canonical	2	10	junction_5	3.05151247663544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTCTAAAAGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	38630331	38654364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ES.34773.1	chr9	-	3201	2	Intergenic	novelGene_28264	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTAACCAAACGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	38751983	38748570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_38751707_38751918
ES.34774.1	chr9	+	175	1	Intergenic	novelGene_28265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	39427904	39428079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_39427900_39428100
ES.34775.1	chr9	-	3477	20	FSM	ENSMUSG00000038112.16	ENSMUST00000119722.8	4224	20	120	627	60	-627	multi-exon	TRUE	canonical	1	1	junction_2	1.49421784911351	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTGTGTTGGTCTTTTG	NA	False	NA	-1	True	ATTAAA	-18	NA	39514863	39499432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_39500422_39500938_39501066_39501896_39502028_39502499_39502605_39502698_39502798_39504091_39504340_39504624_39504726_39504966_39505132_39505836_39505952_39507890_39507971_39508350_39508496_39508903_39508993_39509209_39509380_39510573_39510689_39510940_39511117_39511234_39511458_39511763_39511967_39512075_39512134_39514510_39514608_39514822
ES.34776.1	chr9	-	270	1	Intergenic	novelGene_28266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATCATATGACACCC	NA	False	NA	NA	False	NA	NA	NA	39783995	39783725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_39783700_39784000
ES.34776.2	chr9	-	156	1	Intergenic	novelGene_28267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	39783993	39783837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_39783800_39784000
ES.34777.1	chr9	+	2542	1	FSM	ENSMUSG00000111553.2	ENSMUST00000217628.2	881	1	749	-2410	749	2410	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGAAAGCCAACACTCA	NA	False	NA	NA	False	NA	NA	NA	39951935	39954477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_39951900_39954500
ES.34778.1	chr9	+	111	1	Intergenic	novelGene_28270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACGAAGGGGAGGA	NA	False	NA	NA	False	GATAAA	-35	NA	40102338	40102449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40102300_40102400
ES.34779.1	chr9	+	3465	7	FSM	ENSMUSG00000025602.14	ENSMUST00000026693.14	3461	7	-6	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCTATGCCTGGTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	40103606	40124483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40103734_40118494_40118991_40119600_40119812_40120173_40120263_40121062_40121193_40121736_40121857_40122191
ES.34779.2	chr9	+	3755	6	NIC	ENSMUSG00000025602.14	novel	3873	7	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.489897948556636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCCAATTTACATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	40103611	40124902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40103734_40118494_40118987_40119600_40119812_40120173_40120263_40121062_40121193_40122191
ES.34779.3	chr9	+	2890	1	NIC	ENSMUSG00000025602.14	novel	3873	7	NA	NA	3	-17980	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGTGTCAAGTGTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	40103615	40106505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40103600_40106500
ES.34779.4	chr9	+	4189	1	NIC	ENSMUSG00000025602.14	novel	3873	7	NA	NA	0	-16672	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAAGTCTTGATTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	40103624	40107813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40103600_40107800
ES.34779.5	chr9	+	3818	7	FSM	ENSMUSG00000025602.14	ENSMUST00000026693.14	3461	7	63	-420	51	5	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATTTACATTTTACCT	NA	False	NA	NA	False	AATAAA	-21	NA	40103675	40124905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40103734_40118494_40118991_40119600_40119812_40120173_40120263_40121062_40121193_40121736_40121857_40122191
ES.34779.6	chr9	+	5971	1	Intergenic	novelGene_28271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAATTTGGTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	40108844	40114815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40108800_40114800
ES.34779.7	chr9	+	11027	1	Genic_Genomic	ENSMUSG00000025602.14	novel	NA	NA	NA	NA	17023	6774	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AAGAAA	-33	NA	40120647	40131674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_40120600_40131700
ES.3478.1	chr10	-	5360	3	Antisense	novelGene_ENSMUSG00000034453.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGTTGTCTCTACATC	NA	False	NA	NA	False	NA	NA	NA	84513411	84501179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84503346_84509189_84509391_84510418
ES.3478.2	chr10	-	5416	3	Antisense	novelGene_ENSMUSG00000034453.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTCAGTTGTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	84513411	84501182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84503346_84509189_84510214_84511182
ES.34780.1	chr9	+	217	1	Intergenic	novelGene_28274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCAGCCTTATTTATAA	2527	False	NA	NA	False	NA	NA	NA	40150687	40150904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40150700_40150900
ES.34781.1	chr9	-	615	3	Antisense	novelGene_ENSMUSG00000049010.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	34.5	51	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAGTTAGAGACAGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	40151171	39970081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_39970551_40121021_40121120_40151123
ES.34781.10	chr9	-	5181	2	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTGAGTCTTGAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	40151208	40089501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40094598_40151123
ES.34781.11	chr9	-	6036	1	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCTGAGTCTTGAGT	5699	False	NA	NA	False	AATAAA	-15	NA	40095538	40089502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40089500_40095500
ES.34781.12	chr9	-	1636	3	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAGAAAGC	2717	False	NA	NA	False	NA	NA	NA	40098520	40096753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40097012_40097048_40097952_40098045
ES.34781.13	chr9	-	2141	3	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	2209	False	NA	NA	False	NA	NA	NA	40099028	40096763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40097002_40097038_40097952_40098038
ES.34781.15	chr9	-	3455	3	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	874	False	NA	NA	False	NA	NA	NA	40100363	40096764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40097012_40097048_40097940_40098046
ES.34781.16	chr9	-	3545	3	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	766	False	NA	NA	False	NA	NA	NA	40100471	40096794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40097012_40097048_40097956_40098050
ES.34781.17	chr9	-	4617	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	13.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGGCCATTATGACCA	NA	False	NA	NA	False	AATACA	-24	NA	40113054	40106696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40107006_40107353_40107440_40108832
ES.34781.18	chr9	-	669	5	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	23.4787137637478	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCTGGCCATTATGACC	NA	False	NA	NA	False	AATACA	-23	NA	40151174	40106697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40107006_40107353_40107440_40108832_40108959_40121021_40121120_40151123
ES.34781.19	chr9	-	2101	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	16.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAATAATATGTTTCC	NA	False	NA	7	True	AATAAA	-28	NA	40151205	40107037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40108959_40121021_40121120_40151123
ES.34781.2	chr9	-	1260	3	NNC	ENSMUSG00000049073.8	novel	1879	2	NA	NA	-109723	-76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTGCTAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	40151203	40038295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40039350_40108832_40108959_40151123
ES.34781.20	chr9	-	1472	5	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	27.761258977215	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	40151646	40108221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40108959_40114335_40114422_40114500_40114529_40121021_40121120_40151123
ES.34781.21	chr9	-	2808	1	Intergenic	novelGene_28272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATTTCTTTTTGGTATG	NA	False	NA	NA	False	AATAAA	-32	NA	40114810	40112002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40112000_40114800
ES.34781.22	chr9	-	3334	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	34.5	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATCTCTACTCTCATA	NA	False	NA	NA	False	AATAAA	-14	NA	40151174	40115885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40119051_40121001_40121120_40151123
ES.34781.23	chr9	-	2084	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	33	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAAGCTTTTTATAGTC	NA	False	NA	NA	False	TATAAA	-33	NA	40151240	40117181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40119051_40121021_40121120_40151123
ES.34781.24	chr9	-	3242	3	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	34.5	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTAAATGAAAAAACTG	NA	False	NA	NA	False	TATAAA	-5	NA	40151207	40117209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40120270_40121021_40121120_40151123
ES.34781.25	chr9	-	5162	1	Intergenic	novelGene_28273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTTTTAGGGATGTA	NA	False	NA	NA	False	NA	NA	NA	40151210	40146048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40146000_40151200
ES.34781.3	chr9	-	1556	6	NNC	ENSMUSG00000049073.8	novel	1879	2	NA	NA	-109725	-76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26.5028300375639	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTGCTAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	40151205	40038295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40039350_40063206_40063277_40071332_40071459_40108832_40108959_40121021_40121120_40151123
ES.34781.4	chr9	-	1426	5	NNC	ENSMUSG00000049073.8	novel	1879	2	NA	NA	-109727	-82	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	24.4642596454501	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTATTTATGTATTGC	NA	False	NA	NA	False	AATAAA	-15	NA	40151207	40038301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40039350_40063206_40063277_40108832_40108959_40121021_40121120_40151123
ES.34781.5	chr9	-	789	3	NNC	ENSMUSG00000049073.8	novel	1879	2	NA	NA	-109730	-498	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTTCCACTTATTCAA	NA	False	NA	NA	False	ATTAAA	-14	NA	40151210	40038717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40039350_40063206_40063277_40151123
ES.34781.6	chr9	-	258	1	Intergenic	novelGene_28268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	40046205	40045947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40045900_40046200
ES.34781.7	chr9	-	1603	1	Intergenic	novelGene_28269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTACCACCATCCTT	NA	False	NA	NA	False	NA	NA	NA	40090325	40088722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40088700_40090300
ES.34781.8	chr9	-	6183	1	Antisense	novelGene_ENSMUSG00000051095.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAACCAAAACAAC	5815	False	NA	NA	False	TTTAAA	-37	NA	40095422	40089239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40089200_40095400
ES.34781.9	chr9	-	1455	4	Antisense	novelGene_ENSMUSG00000025602.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	27.7648858972784	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTGAGTCTTGAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	40151210	40089501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40090646_40108832_40108959_40121021_40121120_40151123
ES.34782.1	chr9	+	3595	7	NIC	ENSMUSG00000049281.17	novel	4150	7	NA	NA	10	133	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAACGTGCTAGATGAGG	NA	False	NA	NA	False	AATAAA	-20	NA	40180522	40203047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40200517
ES.34782.2	chr9	+	4129	7	FSM	ENSMUSG00000049281.17	ENSMUST00000049941.12	4150	7	20	1	20	-1	multi-exon	FALSE	canonical	0	0	junction_6	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGGTTTGCTAT	NA	False	NA	NA	False	AATAAA	-39	NA	40180532	40202913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40199839
ES.34782.3	chr9	+	3413	7	NIC	ENSMUSG00000049281.17	novel	4150	7	NA	NA	-15	-22	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGCGTCTCTGAAGAC	NA	False	NA	NA	False	AATAAA	-18	NA	40180549	40202892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199750_40200517
ES.34782.4	chr9	+	4024	6	FSM	ENSMUSG00000049281.17	ENSMUST00000171835.9	4024	6	3	-3	3	3	multi-exon	FALSE	canonical	1	1	junction_4	0.748331477354788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGTTTGCTATGCTT	NA	False	NA	NA	False	AATAAA	-43	NA	40180731	40202917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669
ES.34783.1	chr9	+	1881	1	Antisense	novelGene_ENSMUSG00000040111.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40230752	40232633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_40230800_40232600
ES.34784.10	chr9	-	5511	17	NIC	ENSMUSG00000040111.18	novel	7445	19	NA	NA	-242	7	intron_retention	FALSE	canonical	3	12	junction_6	5.00585594578989	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAATGCCTATGTACCA	NA	False	NA	NA	False	NA	NA	NA	40245066	40209164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740
ES.34784.11	chr9	-	2601	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-11901	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	6.66532765869645	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGATAATGCCTA	8214	False	NA	NA	False	NA	NA	NA	40325066	40209171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324668_40324836
ES.34784.12	chr9	-	2445	19	NIC	ENSMUSG00000040111.18	novel	2781	20	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	6.61484488400946	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGATAATGCCTA	3233	False	NA	NA	False	NA	NA	NA	40303773	40209171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40303624
ES.34784.13	chr9	-	2492	19	NNC	ENSMUSG00000040111.18	novel	2781	20	NA	NA	-253	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.6173940004456	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGATAATGCCTA	NA	False	NA	NA	False	NA	NA	NA	40245077	40209171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40215042_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40245038
ES.34784.14	chr9	-	2510	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12659	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.77742709334008	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAGATAATGCCT	7456	False	NA	NA	False	NA	NA	NA	40325824	40209172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214795_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40325685
ES.34784.15	chr9	-	5857	18	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12624	-24	intron_retention	FALSE	non_canonical	0	0	junction_15	7.13536928334397	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATTATATACAGA	7491	False	NA	NA	False	NA	NA	NA	40325789	40209195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40244717_40244952_40324592_40324671_40325685
ES.34784.16	chr9	-	2441	19	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12626	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	7.7817450199525	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAATATATATTATAT	7489	False	NA	NA	False	AATACA	-43	NA	40325791	40209200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40244726_40244952_40324592_40324668_40325685
ES.34784.18	chr9	-	3381	20	FSM	ENSMUSG00000040111.18	ENSMUST00000045682.7	7488	20	-565	4672	-565	-29	multi-exon	FALSE	canonical	0	0	junction_19	6.66532765869645	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAATATATATTATAT	9213	False	NA	NA	False	AATACA	-43	NA	40367625	40209200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40366589
ES.34784.19	chr9	-	2375	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	306	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	7.81609958626311	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATATAAATATATATTAT	9775	False	NA	NA	False	AATACA	-41	NA	40366660	40209202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223131_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40366589
ES.34784.2	chr9	-	7153	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12659	0	intron_retention	FALSE	canonical	2	2	junction_19	6.38514550362739	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGTGTGTGCTTAT	7456	False	NA	NA	False	AATAAA	-1	NA	40325824	40204528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324668_40325685
ES.34784.20	chr9	-	2481	19	NNC	ENSMUSG00000040111.18	novel	7445	19	NA	NA	4606	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	6.61484488400946	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATACAGAATATAAATATA	NA	False	NA	NA	False	AATACA	-35	NA	40308559	40209208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40308337
ES.34784.7	chr9	-	3334	18	NNC	ENSMUSG00000040111.18	novel	3824	21	NA	NA	1283	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.09545132651236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAATGGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	40243541	40204538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40205724_40209281_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228903_40243359
ES.34784.8	chr9	-	5332	18	NNC	ENSMUSG00000040111.18	novel	7445	19	NA	NA	177	-1505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	6.80423234866883	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCTTGTGTTAGGGC	NA	False	NA	NA	False	AATAAA	-21	NA	40244647	40206045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244526
ES.34784.9	chr9	-	5184	20	NNC	ENSMUSG00000040111.18	novel	7488	20	NA	NA	-12617	-1918	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_19	5.57795423136496	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTAGGTTTGACCTTGA	7498	False	NA	NA	False	AATAAA	-15	NA	40325782	40206458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40325685
ES.34785.1	chr9	+	323	1	Intergenic	novelGene_28275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGCTAAACCA	NA	False	NA	NA	False	NA	NA	NA	40543218	40543541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40543200_40543500
ES.34786.1	chr9	+	173	1	Antisense	novelGene_ENSMUSG00000110992.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTT	3973	False	NA	NA	False	NA	NA	NA	40579328	40579501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_40579300_40579500
ES.34787.1	chr9	+	2965	1	Intergenic	novelGene_28276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AAGAAA	-23	NA	40601340	40604305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40601300_40604300
ES.34788.1	chr9	+	134	1	Intergenic	novelGene_28277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40673635	40673769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40673600_40673800
ES.34789.1	chr9	+	178	1	Intergenic	novelGene_28278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAGAGAGAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	40678963	40679141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40679000_40679100
ES.3479.1	chr10	-	222	1	Intergenic	novelGene_2671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCCATTTTTTAAAATT	4208	False	NA	NA	False	NA	NA	NA	84523503	84523281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84523300_84523500
ES.34790.1	chr9	+	3968	6	NNC	ENSMUSG00000032024.11	novel	4154	7	NA	NA	-3449	-1	intron_retention	FALSE	canonical	1	1	junction_1	3.84707681233427	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTGTAAAATAGTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	40681940	40696614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40682262_40682400_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ES.34790.2	chr9	+	1466	6	NNC	ENSMUSG00000032024.11	novel	4154	7	NA	NA	-3160	634	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.84707681233427	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AAGAAA	-9	NA	40682229	40694401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40682262_40682400_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ES.34790.3	chr9	+	3463	5	NNC	ENSMUSG00000032024.11	novel	4154	7	NA	NA	-1906	-9	intron_retention	FALSE	canonical	0	0	junction_1	4.38748219369606	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACTGACATTTGTAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	40683483	40696606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40683510_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ES.34790.4	chr9	+	3644	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86378	-227	-1704	227	3prime_fragment	FALSE	canonical	3	9	junction_1	0.816496580927726	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAAGGAGGAGCTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	40683685	40696842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
ES.34790.5	chr9	+	3735	4	NNC	ENSMUSG00000032024.11	novel	4154	7	NA	NA	-1662	232	intron_retention	FALSE	canonical	1	1	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGAGCTGGGGCTATT	NA	False	NA	NA	False	AATAAA	-19	NA	40683727	40696847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40683825_40685530_40685782_40692408_40692551_40693602
ES.34790.6	chr9	+	3791	4	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	86469	-465	-1613	465	3prime_fragment	FALSE	canonical	3	9	junction_1	0.816496580927726	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGAAATCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	40683776	40697080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_40683825_40685658_40685782_40692408_40692551_40693602
ES.34790.7	chr9	+	3183	2	ISM	ENSMUSG00000032024.11	ENSMUST00000134153.2	616	4	6991	-2848	6991	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTGTAAAATAGTAAGAT	4533	False	NA	NA	False	AATAAA	-19	NA	40692380	40696615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_40692551_40693602
ES.34791.1	chr9	-	3156	3	Fusion	ENSMUSG00000111189.2_ENSMUSG00000087135.8	novel	432	2	NA	NA	-36	2419	multi-exon	FALSE	canonical	0	0	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40694793	40670129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_40672956_40694218_40694287_40694531
ES.34791.2	chr9	-	478	2	Antisense	novelGene_ENSMUSG00000032024.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTGGTATTATTATTA	NA	False	NA	NA	False	AATACA	-11	NA	40689408	40688697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40689030_40689262
ES.34791.3	chr9	-	2258	3	NNC	ENSMUSG00000087135.8	novel	819	4	NA	NA	16	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTCTGTGTGTGACTGC	NA	False	NA	NA	False	AATAAA	-22	NA	40695461	40692044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40692843_40692896_40694287_40695391
ES.34791.4	chr9	-	934	3	NNC	ENSMUSG00000087135.8	novel	639	3	NA	NA	-199	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAATTCTGTGTGTGAC	NA	False	NA	NA	False	AATAAA	-19	NA	40694956	40692047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40692489_40694218_40694287_40694531
ES.34792.1	chr9	+	180	1	Intergenic	novelGene_28279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	8223	False	NA	NA	False	NA	NA	NA	40704341	40704521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40704300_40704500
ES.34793.1	chr9	-	245	1	Intergenic	novelGene_28280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGGACCGGTGTGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	40707441	40707196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40707200_40707400
ES.34794.1	chr9	+	2621	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	-226	-1	-226	1	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTCCTGACTGAGTT	1941	False	NA	11	True	AATAAA	-21	NA	40712053	40716497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.10	chr9	+	2672	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	3928	junction_2	6440.2006179932	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2457	False	NA	9	True	AATAAA	-19	NA	40712569	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.11	chr9	+	2091	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7931.37229515643	1818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCATACAGTTGTCCTGA	2457	False	NA	4	True	AATAAA	-14	NA	40712569	40716490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713417_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.12	chr9	+	2094	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	246	junction_8	7347.50570665821	1818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2458	False	NA	8	True	AATAAA	-18	NA	40712570	40716494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716234
ES.34794.13	chr9	+	2570	6	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	3928	junction_2	6461.09066334779	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	2458	False	NA	6	True	AATAAA	-16	NA	40712570	40716492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713920_40714034_40714826_40715035_40715239_40715460_40715992_40716227
ES.34794.14	chr9	+	2051	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_3	7048.63259345385	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2458	False	NA	9	True	AATAAA	-19	NA	40712570	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714085_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.15	chr9	+	2427	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7746	junction_3	4717.86918710838	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2458	False	NA	9	True	AATAAA	-19	NA	40712570	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40714188_40714269_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.16	chr9	+	2094	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8626.32479590092	1818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2458	False	NA	9	True	AATAAA	-19	NA	40712570	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714820_40715033_40715239_40715460_40715660_40715762_40715992_40716227
ES.34794.17	chr9	+	2071	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7062.92189779662	1818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCATACAGTTGTCCTGA	2459	False	NA	4	True	AATAAA	-14	NA	40712571	40716490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713901_40714040_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.2	chr9	+	1782	8	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7944.57997502649	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2141	False	NA	9	True	AATAAA	-19	NA	40712253	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714543_40715611_40715660_40715758_40715992_40716227
ES.34794.20	chr9	+	1880	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7690.53829390375	1818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	2459	False	NA	6	True	AATAAA	-16	NA	40712571	40716492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715624_40715940_40715992_40716227
ES.34794.22	chr9	+	3809	2	FSM	ENSMUSG00000015656.18_ENSMUSG00002076818.1	ENSMUST00000127699.2	456	2	-1066	-2287	0	0	multi-exon	FALSE	canonical	3	3928	junction_1	0	1818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2459	False	NA	9	True	AATAAA	-19	NA	40712571	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40713920_40714034
ES.34794.23	chr9	+	2182	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3928	junction_3	5605.38982605499	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2459	False	NA	8	True	AATAAA	-18	NA	40712571	40716494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.24	chr9	+	2768	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3928	junction_2	6679.63991045426	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2459	False	NA	8	True	AATAAA	-18	NA	40712571	40716494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
ES.34794.25	chr9	+	2315	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	7746	junction_3	4587.27136275537	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2459	False	NA	9	True	AATAAA	-19	NA	40712571	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
ES.34794.26	chr9	+	2093	9	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	7591.96349355685	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	2459	False	NA	6	True	AATAAA	-16	NA	40712571	40716492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715243_40715469_40715660_40715758_40715992_40716227
ES.34794.27	chr9	+	2630	5	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16906	junction_2	1584.02888231244	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	2459	False	NA	6	True	AATAAA	-16	NA	40712571	40716492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40714826_40715035_40715239_40715460
ES.34794.30	chr9	+	3923	1	FSM	ENSMUSG00002076818.1	ENSMUST00020181739.1	90	1	-3472	-361	-3472	361	mono-exon	FALSE	NA	NA	NA	NA	NA	1818	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2459	False	NA	8	True	AATAAA	-18	NA	40712571	40716494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_40712600_40716500
ES.34794.31	chr9	+	3130	3	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	17214	junction_1	1776.5	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2462	False	NA	9	True	AATAAA	-19	NA	40712574	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40715239_40715460
ES.34794.32	chr9	+	2604	5	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16906	junction_2	2249.18033681161	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2462	False	NA	9	True	AATAAA	-19	NA	40712574	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40715239_40715460_40715992_40716227
ES.34794.35	chr9	+	3111	3	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	17214	junction_1	2458	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTGTCCTGACTGA	2466	False	NA	8	True	AATAAA	-18	NA	40712578	40716494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40715992_40716227
ES.34794.36	chr9	+	2307	9	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	40	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	7902.13270955221	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2525	False	NA	9	True	AATAAA	-19	NA	40712637	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712917_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34794.4	chr9	+	2203	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2456	False	NA	9	True	AATAAA	-19	NA	40712568	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
ES.34794.5	chr9	+	2619	5	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	16906	junction_2	2172.71723597435	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	2456	False	NA	6	True	AATAAA	-16	NA	40712568	40716492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713424_40713713_40714826_40715035_40715992_40716227
ES.34794.6	chr9	+	2394	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	3928	junction_2	6450.55656513452	1818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTTGTCCTGACTGAG	2456	False	NA	9	True	AATAAA	-19	NA	40712568	40716495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ES.34795.1	chr9	-	462	1	Intergenic	novelGene_28281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAAATGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-7	NA	40712070	40711608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40711600_40712100
ES.34796.1	chr9	-	1133	1	Antisense	novelGene_ENSMUSG00000015656.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	40714796	40713663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_40713700_40714800
ES.34797.1	chr9	+	158	1	Intergenic	novelGene_28282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	40725650	40725808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40725600_40725800
ES.34798.1	chr9	-	196	1	Intergenic	novelGene_28283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	40747225	40747029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40747000_40747200
ES.34799.1	chr9	+	171	1	Intergenic	novelGene_28284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGGAGATGATCA	NA	False	NA	NA	False	NA	NA	NA	40756170	40756341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_40756200_40756300
ES.348.1	chr1	+	173	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATACCTCATGGTTTA	NA	False	NA	14	True	NA	NA	NA	39067594	39067767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39067600_39067800
ES.3480.1	chr10	+	3641	18	NNC	ENSMUSG00000020037.16	novel	3534	18	NA	NA	-2524	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.32842232831014	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGCCTCCGTTTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	84595577	84742397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84595748_84615878_84615966_84634391_84634453_84650499_84650624_84671156_84671219_84675880_84676095_84676702_84676781_84680064_84680229_84694360_84694462_84696361_84696421_84699106_84699252_84704215_84704311_84704708_84704827_84716033_84716154_84716676_84716839_84730063_84730227_84731820_84731960_84740818
ES.3480.2	chr10	+	176	1	Intergenic	novelGene_2672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAAAGACTAGTA	6423	False	NA	NA	False	NA	NA	NA	84605951	84606127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84606000_84606100
ES.3480.3	chr10	+	2933	11	NNC	ENSMUSG00000020037.16	novel	3274	14	NA	NA	5932	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.49666295470958	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAGTATTGAAATG	NA	False	NA	NA	False	NA	NA	NA	84679943	84742378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84680229_84694360_84694462_84696361_84696421_84699106_84699252_84704215_84704311_84704708_84704827_84716033_84716154_84716676_84716839_84730063_84730227_84731820_84731960_84740832
ES.3480.4	chr10	+	174	1	Intergenic	novelGene_2673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84719299	84719473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84719300_84719500
ES.34800.1	chr9	+	429	2	Antisense	novelGene_ENSMUSG00000032023.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGATTCACTTCACCGTT	NA	False	NA	NA	False	AATAAA	-14	NA	40855481	40856337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_40855682_40856108
ES.34801.1	chr9	-	6032	14	NNC	ENSMUSG00000032020.16	novel	6354	14	NA	NA	-241	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.56051030416819	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGATTTAAGTCCTG	6681	False	NA	NA	False	AATAAA	-31	NA	41069039	40922400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962608_40962667_41068594
ES.34801.2	chr9	-	5122	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	561	671	1	-671	multi-exon	FALSE	canonical	0	0	junction_12	2.76067052998867	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTTTTATAACTCTTC	6923	False	NA	NA	False	GGGGCT	-39	NA	41068797	40923064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ES.34801.3	chr9	-	3248	14	NNC	ENSMUSG00000032020.16	novel	6354	14	NA	NA	16	1089	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.56051030416819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCATATCCATGTCGAT	6938	False	NA	NA	False	AATAAA	-18	NA	41068782	40924927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962608_40962667_41068594
ES.34801.5	chr9	-	3220	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	294	2840	-266	783	multi-exon	FALSE	canonical	0	0	junction_12	2.76067052998867	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGAGGGTCGTGTTGTT	6656	False	NA	NA	False	AATACA	-17	NA	41069064	40925233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ES.34801.6	chr9	-	156	1	Intergenic	novelGene_28285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	7614	False	NA	NA	False	NA	NA	NA	40976887	40976731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_40976700_40976900
ES.34802.1	chr9	+	207	1	Intergenic	novelGene_28286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGGACCCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	41088904	41089111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_41088900_41089100
ES.34803.1	chr9	+	7974	1	FSM	ENSMUSG00000074415.15	ENSMUST00000181296.2	4244	1	-3649	-81	-2924	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGTGAACTCGTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	41496140	41504114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_41496100_41504100
ES.34804.1	chr9	-	4878	1	Genic_Genomic	ENSMUSG00000111511.2	novel	NA	NA	NA	NA	-2350	-21629	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTTGTTTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	41789914	41785036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_41785000_41789900
ES.34805.1	chr9	+	2428	2	Antisense	novelGene_ENSMUSG00000049313.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41877850	41881249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_41879973_41880943
ES.34805.2	chr9	+	2818	1	Antisense	novelGene_ENSMUSG00000049313.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTGTTTACAAGCATT	NA	False	NA	NA	False	NA	NA	NA	41878457	41881275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_41878500_41881300
ES.34806.1	chr9	+	1551	1	Antisense	novelGene_ENSMUSG00000049313.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAACAAGAAGCTGT	NA	False	NA	NA	False	NA	NA	NA	41919487	41921038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_41919500_41921000
ES.34807.1	chr9	+	480	1	Intergenic	novelGene_28287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAAACAAGATGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	41978586	41979066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_41978600_41979100
ES.34808.1	chr9	+	4845	2	Antisense	novelGene_ENSMUSG00000049313.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGGGTGGGAATTAGT	NA	False	NA	NA	False	NA	NA	NA	41997686	42004827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42001309_42003604
ES.34809.1	chr9	+	242	1	Intergenic	novelGene_28288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACACACACACACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42015175	42015417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_42015200_42015400
ES.3481.1	chr10	+	3307	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-399	1	-359	-1	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	21	True	AATAAA	-22	NA	84753120	84852310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ES.3481.10	chr10	+	3999	8	ISM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	19	21742	19	2537	5prime_fragment	FALSE	canonical	3	55	junction_2	12.0881118864607	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGGAAATGGCTTTCT	NA	False	NA	NA	False	AATAAA	-10	NA	84753498	84830569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983
ES.3481.11	chr10	+	2534	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	24	351	24	-113	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGGGTCTCTGTGTGT	NA	False	NA	NA	False	CATAAA	-25	NA	84753543	84851960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ES.3481.12	chr10	+	7751	7	NNC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	32586	-1	intron_retention	FALSE	canonical	0	0	junction_6	33.5232092072874	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	21	True	AATAAA	-22	NA	84805842	84852310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84844520_84844658_84845315
ES.3481.13	chr10	+	2583	1	NIC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	-28580	-9450	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84815999	84818582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84816000_84818600
ES.3481.14	chr10	+	330	1	Intergenic	novelGene_2675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCAGCA	NA	False	NA	NA	False	NA	NA	NA	84821465	84821795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84821500_84821800
ES.3481.2	chr10	+	5177	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	-378	-1890	-338	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGACATTCCGTT	NA	False	NA	NA	False	NA	NA	NA	84753141	84854201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ES.3481.3	chr10	+	3392	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	-324	1	-324	-1	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	21	True	AATAAA	-22	NA	84753155	84852310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
ES.3481.4	chr10	+	3145	10	NNC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	-244	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9773555724336	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCATCTGTGTGTGTG	NA	False	NA	18	True	AATAAA	-19	NA	84753235	84852307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84753474_84753517_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ES.3481.5	chr10	+	4722	8	NIC	ENSMUSG00000035620.16	novel	2909	9	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	25.5390856915275	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGACATTCCGT	NA	False	NA	NA	False	NA	NA	NA	84753450	84854200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84850939
ES.3481.6	chr10	+	2862	8	NIC	ENSMUSG00000035620.16	novel	2909	9	NA	NA	-15	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	27.0117132566823	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGCCATCTGTGTGTG	NA	False	NA	16	True	AATAAA	-17	NA	84753464	84852305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84815911_84816057_84827983_84828129_84850939
ES.3481.7	chr10	+	3395	12	NNC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.9916092513193	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATCTGTGTGTGTGTTT	NA	False	NA	21	True	AATAAA	-22	NA	84753465	84852310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84844520_84844658_84845315_84845492_84850939
ES.3481.8	chr10	+	4950	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	9	-1890	9	0	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGTGACATTCCGTT	NA	False	NA	NA	False	NA	NA	NA	84753488	84854201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
ES.3481.9	chr10	+	4705	10	NNC	ENSMUSG00000035620.16	novel	3069	10	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9773555724336	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGACATTCCGT	NA	False	NA	NA	False	NA	NA	NA	84753489	84854200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84753525_84753647_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ES.34810.1	chr9	-	10768	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-48	-5	-48	5	multi-exon	TRUE	canonical	3	333	junction_27	73.2507244219374	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCAGCAGCCGATTTGTC	NA	False	NA	-6	True	AATAAA	-21	NA	42035641	41876010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.11	chr9	-	8459	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	2281	-25	-2281	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATACATAGTGTGCCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	42035618	41878296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.14	chr9	-	7801	49	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	158	2146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_48	112.173258148946	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGGTCTGTGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	42035435	41878888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42030725_42030843_42035124
ES.34810.16	chr9	-	7926	49	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	9	2115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	126.792727840887	682	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTCCATTCTGATATAT	NA	False	NA	79	True	NA	NA	NA	42035584	41878919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891567_41891688_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983536_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.17	chr9	-	7802	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-67	2980	-67	2039	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTTCCCTTTCGTTT	NA	False	NA	3	True	AATAGA	-38	NA	42035660	41878995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.19	chr9	-	3628	20	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-16678	2017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	139.236382038254	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATGTCTCCATTTTA	NA	False	NA	-19	True	AATAGA	-16	NA	41913808	41879017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913631
ES.34810.20	chr9	-	7302	47	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	21838	2017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	96.8438026783452	680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATGTCTCCATTTTA	8669	False	NA	-19	True	AATAGA	-16	NA	42013755	41879017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42013580
ES.34810.21	chr9	-	7789	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-46	2017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	95.9373616758543	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATGTCTCCATTTTA	NA	False	NA	-19	True	AATAGA	-16	NA	42035639	41879017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894417_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.22	chr9	-	7593	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	30	3092	30	1927	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATCATTGTCACTTGAA	NA	False	NA	-109	True	NA	NA	NA	42035563	41879107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.23	chr9	-	7504	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-277	3488	-277	1531	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTACGTCTCGTTTGGGTT	NA	False	NA	0	True	NA	NA	NA	42035870	41879503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.24	chr9	-	7135	47	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-70	1531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	112.628873884605	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTACGTCTCGTTTGGGTT	NA	False	NA	0	True	NA	NA	NA	42035663	41879503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896897_41898757_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.26	chr9	-	7300	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	10	1497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.9205807372085	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGAGTGCATTCTCCTT	NA	False	NA	-34	True	AATAAA	-20	NA	42035583	41879537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903849_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.27	chr9	-	6022	42	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	51992	1496	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	99.7985895546474	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	4653	False	NA	-35	True	AATAAA	-19	NA	41983601	41879538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881147_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540
ES.34810.29	chr9	-	4766	32	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	173	1496	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	112.985499976744	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	42035420	41879538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.31	chr9	-	5627	39	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	60191	1496	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	89.0566752845759	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	41975402	41879538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879988_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282
ES.34810.33	chr9	-	7297	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-81	1496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	95.9316708315757	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	42035674	41879538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957982_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.34	chr9	-	5975	28	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-45888	1494	intron_retention	FALSE	canonical	3	333	junction_26	84.4798171528137	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACGGAGTGCATTCTC	NA	False	NA	-37	True	AATAAA	-17	NA	41943018	41879540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964
ES.34810.36	chr9	-	7343	49	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-36	1494	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_48	112.173258148946	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACGGAGTGCATTCTC	NA	False	NA	-37	True	AATAAA	-17	NA	42035629	41879540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42030725_42030843_42035124
ES.34810.39	chr9	-	7070	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	172	1494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	113.508263350297	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGACGGAGTGCATTCTC	NA	False	NA	-37	True	AATAAA	-17	NA	42035421	41879540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903126_41903599_41903732_41907466_41907585_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.42	chr9	-	7125	49	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-25	1493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9330813286683	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACGGAGTGCATTCT	NA	False	NA	-38	True	AATAAA	-16	NA	42035618	41879541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879829_41879917_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.43	chr9	-	6899	47	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	173	1493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_46	96.8438026783452	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACGGAGTGCATTCT	NA	False	NA	-38	True	AATAAA	-16	NA	42035420	41879541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42035124
ES.34810.46	chr9	-	7125	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	9	1493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	95.7589634737087	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACGGAGTGCATTCT	NA	False	NA	-38	True	AATAAA	-16	NA	42035584	41879541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900047_41900645_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.48	chr9	-	6794	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	14979	1493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	95.9345210146889	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGACGGAGTGCATTCT	1810	False	NA	-38	True	AATAAA	-16	NA	42020614	41879541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42020540
ES.34810.5	chr9	-	6588	47	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-25	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.2197713797967	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATCCACTGTGTGTG	NA	False	NA	-76	True	NA	NA	NA	42035618	41876080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41876127_41885266_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.54	chr9	-	7101	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	10	1491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	95.5908504176379	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGGACGGAGTGCATT	NA	False	NA	-40	True	AATAAA	-14	NA	42035583	41879543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912826_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.56	chr9	-	6762	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	11527	1490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	95.9345210146889	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATGGACGGAGTGCAT	9854	False	NA	-41	True	AATAAA	-13	NA	42024066	41879544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42024021
ES.34810.58	chr9	-	6923	46	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	19	1489	combination_of_known_splicesites	FALSE	canonical	0	0	junction_45	97.8714702625746	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATGGACGGAGTGCA	NA	False	NA	-42	True	AATAAA	-12	NA	42035574	41879545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42035124
ES.34810.59	chr9	-	7098	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-82	3699	-82	1320	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTTGATTTTAGTAACC	NA	False	NA	NA	False	AATAAA	-28	NA	42035675	41879714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.6	chr9	-	10628	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	112	-25	-112	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAACAATGAAA	NA	False	NA	-123	True	AATAAA	-15	NA	42035618	41876127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.61	chr9	-	6986	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	19	1317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_46	95.8120944704191	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGTTGATTTTAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	42035574	41879717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010559_42017723_42017841_42035124
ES.34810.64	chr9	-	7194	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-67	1314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	95.9205807372085	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACCAGGTTGATTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	42035660	41879720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903849_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.65	chr9	-	8195	47	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-55	1313	intron_retention	FALSE	canonical	3	333	junction_26	73.998084070635	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAACCAGGTTGATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	42035648	41879721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.7	chr9	-	10441	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	299	-25	-299	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGTACTTGTTTCTT	NA	False	NA	2	True	AATAAA	-29	NA	42035618	41876314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.70	chr9	-	10589	46	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	166	1270	intron_retention	FALSE	non_canonical	0	0	junction_19	81.856031399911	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035427	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41916264_41916301_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.71	chr9	-	6968	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-15	1270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	95.8762358615928	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035608	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952872_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.72	chr9	-	6587	46	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	177	1270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	115.579279615955	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035416	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900092_41900645_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.73	chr9	-	6606	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	14944	1270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	95.9345210146889	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	1775	False	NA	NA	False	NA	NA	NA	42020649	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42020540
ES.34810.78	chr9	-	6811	49	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	250	1270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	112.29355865753	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035343	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42001516_42001612_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.79	chr9	-	5176	22	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-22392	1270	intron_retention	TRUE	non_canonical	0	0	junction_5	146.178718311096	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	41919522	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890951_41891000_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902609_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474
ES.34810.80	chr9	-	6924	47	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-77	1270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	113.421725047124	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035670	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975009_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.81	chr9	-	6967	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-13	1270	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_4	93.7708262668066	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035606	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887749_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.82	chr9	-	7002	47	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-149	1270	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	96.4638707257154	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035742	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.85	chr9	-	6662	47	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	111	1270	combination_of_known_splicesites	FALSE	canonical	0	0	junction_39	96.7762337249629	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAGAAGGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	42035482	41879764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.87	chr9	-	6907	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	39	1259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	95.9299059406398	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	42035554	41879775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890782_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.88	chr9	-	6942	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-10	1259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	95.8762358615928	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	42035603	41879775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952345_41952852_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.9	chr9	-	8693	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-30	2052	-30	-2052	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTGGGAGGCAAGC	NA	False	NA	NA	False	AATAAA	-25	NA	42035623	41878067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.91	chr9	-	3252	4	NIC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-3171	1256	intron_retention	FALSE	canonical	3	474	junction_3	125.300527621484	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	41889054	41879778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_41879967_41880939_41881153_41885232_41887761_41888731
ES.34810.94	chr9	-	6948	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-67	1248	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	95.2230280931108	662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAACTACAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-40	NA	42035660	41879786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993146_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.95	chr9	-	6935	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-26	3806	-26	1213	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTGAGTTGCAATATG	NA	False	NA	NA	False	GATAAA	-28	NA	42035619	41879821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.96	chr9	-	7070	48	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-40	1213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	113.450387806459	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTTTGAGTTGCAATATG	NA	False	NA	NA	False	GATAAA	-28	NA	42035633	41879821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903849_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944856_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.97	chr9	-	3739	23	NNC	ENSMUSG00000049313.9	novel	10715	48	NA	NA	-25	-38335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.6536941537952	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTGTCTGAGACTCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	42035618	41934138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_41934446_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34810.98	chr9	-	3639	20	ISM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	-25	66429	-25	-46641	5prime_fragment	FALSE	canonical	3	338	junction_4	21.53409973794	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTTGACTCGGCCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	42035618	41942444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ES.34811.1	chr9	+	2963	2	NIC	ENSMUSG00000111167.2	novel	2075	3	NA	NA	-19	5	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCTCAAGTGGGTGAC	NA	False	NA	NA	False	AATAAA	-8	NA	42053363	42057807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_42054431_42055911
ES.34812.1	chr9	+	659	4	Antisense	novelGene_ENSMUSG00000111767.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.16024689946929	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGATTGTCCTGAATAC	7057	False	NA	NA	False	NA	NA	NA	42102070	42106556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42102162_42103190_42103314_42104626_42104782_42106266
ES.34812.2	chr9	+	321	2	Antisense	novelGene_ENSMUSG00000111767.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGAGGGCTCGAATGC	7060	False	NA	NA	False	GATAAA	-18	NA	42102073	42103423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42102162_42103190
ES.34813.1	chr9	-	5150	5	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	-49	5	intron_retention	FALSE	canonical	3	174	junction_4	25.1632172028936	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGACCTGTGTTTT	NA	False	NA	4	True	NA	NA	NA	42175601	42162885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.10	chr9	-	2220	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-58	-1459	-57	595	multi-exon	FALSE	canonical	2	2	junction_4	78.337411241373	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCCACTTAAATGTTAT	NA	False	NA	-11	True	AATAAA	-18	NA	42175609	42165433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
ES.34813.11	chr9	-	4107	1	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	5929	568	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAATAAAAGTTGATCAT	NA	False	NA	-38	True	TATAAA	-36	NA	42169567	42165460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42165500_42169600
ES.34813.12	chr9	-	2514	5	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	0	556	intron_retention	FALSE	canonical	3	174	junction_4	25.1632172028936	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACACCAATA	NA	False	NA	-50	True	TATAAA	-24	NA	42175552	42165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.13	chr9	-	3471	4	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	10	556	intron_retention	FALSE	canonical	3	174	junction_3	28.2410261066335	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACACCAATA	NA	False	NA	-50	True	TATAAA	-24	NA	42175541	42165472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42167504_42169876_42171196_42173346_42173428_42175501
ES.34813.15	chr9	-	1686	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	-12	3	-12	-3	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGCTCTTCCATAA	NA	False	NA	-7	True	AATAAA	-26	NA	42175508	42166031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ES.34813.16	chr9	-	1702	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-56	3141	-56	-3	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGCTCTTCCATAA	NA	False	NA	-7	True	AATAAA	-26	NA	42175608	42166031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.17	chr9	-	1740	7	NNC	ENSMUSG00000032018.15	novel	1677	6	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.7290774493021	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGCTCTTCCATAA	NA	False	NA	-7	True	AATAAA	-26	NA	42175511	42166031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42167094_42167402_42167504_42169876_42170010_42170439_42170491_42170977_42171196_42173346_42173428_42175417
ES.34813.2	chr9	-	4871	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-81	-3	-81	3	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	2	True	NA	NA	NA	42175633	42162887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.3	chr9	-	4751	5	FSM	ENSMUSG00000032018.15	ENSMUST00000217513.2	703	5	-43	-4005	-42	3	multi-exon	TRUE	canonical	2	2	junction_4	78.337411241373	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	2	True	NA	NA	NA	42175594	42162887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42175501
ES.34813.4	chr9	-	4830	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	-12	-3141	-12	3	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	False	NA	2	True	NA	NA	NA	42175508	42162887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ES.34813.5	chr9	-	4611	7	NNC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.8830569770106	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTGTGTGGACCTGT	NA	False	NA	-1	True	NA	NA	NA	42175551	42162890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42166102_42166276_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.6	chr9	-	6052	4	NIC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	11	0	intron_retention	FALSE	canonical	3	174	junction_3	28.2410261066335	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTGTGTGGACCTGT	NA	False	NA	-1	True	NA	NA	NA	42175540	42162890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42167504_42169876_42171196_42173346_42173428_42175501
ES.34813.7	chr9	-	4173	9	NNC	ENSMUSG00000032018.15	novel	4787	6	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9505627945406	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCATTGTGTGGACCT	NA	False	NA	-3	True	NA	NA	NA	42175530	42162892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42163592_42163836_42163963_42164227_42164881_42164960_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.8	chr9	-	2311	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	-56	2532	-56	606	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTATAGCACAAAACG	NA	False	NA	0	True	AATAAA	-29	NA	42175608	42165422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ES.34813.9	chr9	-	2295	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	-12	-606	-12	606	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTATAGCACAAAACG	NA	False	NA	0	True	AATAAA	-29	NA	42175508	42165422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ES.34814.1	chr9	-	6328	22	NNC	ENSMUSG00000037705.14	novel	7048	24	NA	NA	-1762	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.349927106111882	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTGTTATTTGGCTCC	NA	False	NA	NA	False	AATAAA	-14	NA	42312987	42240919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42241622_42242219_42242337_42242604_42242693_42243703_42243867_42248401_42248651_42249110_42249275_42250204_42250408_42251553_42251665_42254924_42255206_42256698_42256986_42259192_42259577_42263279_42263480_42270201_42270764_42277963_42278566_42284142_42284717_42295290_42295704_42298954_42299121_42299462_42299601_42303144_42303433_42306228_42306363_42310959_42311109_42312634
ES.34814.2	chr9	-	157	1	Intergenic	novelGene_28289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAATAAATAAATAAATA	8441	False	NA	NA	False	NA	NA	NA	42253697	42253540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_42253500_42253700
ES.34815.1	chr9	-	5030	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	-29	-1	-22	1	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTTCTGAGTGTTT	NA	False	NA	0	True	ATTAAA	-18	NA	42383583	42323610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ES.34815.10	chr9	-	4882	8	NNC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.8752928923939	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42383513	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354296_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ES.34815.11	chr9	-	6320	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	34	junction_6	5.66911711723165	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42383544	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42355885_42361219_42361360_42362908_42363059_42383361
ES.34815.12	chr9	-	4803	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	15.8788818526019	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTGTGTTCTGAGTG	NA	False	NA	-3	True	ATTAAA	-15	NA	42383541	42323613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42361219_42361360_42362908_42363059_42383361
ES.34815.13	chr9	-	4712	6	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.808508712814	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCCTTGTGTTCTGAGT	NA	False	NA	-4	True	ATTAAA	-14	NA	42383513	42323614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ES.34815.14	chr9	-	5018	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066179.14	3893	8	-27	-1098	-27	-4	multi-exon	FALSE	canonical	0	0	junction_7	17.1607049947946	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTCCTTGTGTTCTGAG	NA	False	NA	-5	True	ATTAAA	-13	NA	42372784	42323615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42372569
ES.34815.15	chr9	-	4975	8	NNC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1273739602868	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTCCTTGTGTTCTGA	NA	False	NA	-6	True	ATTAAA	-12	NA	42383510	42323616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361384_42362908_42363059_42383361
ES.34815.16	chr9	-	4958	8	NNC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2461175755174	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTACTCCTTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-10	NA	42383527	42323618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350400_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ES.34815.17	chr9	-	2026	8	NNC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	-5	477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1273739602868	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTTGGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	42383566	42326493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42363012_42363059_42383361
ES.34815.18	chr9	-	6081	1	NIC	ENSMUSG00000037287.16	novel	4849	8	NA	NA	4761	3234	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGAAATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	42364134	42358053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42358100_42364100
ES.34815.19	chr9	-	3210	1	FSM	ENSMUSG00000037287.16	ENSMUST00000213428.2	3149	1	-58	-3	-32	3	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTGATCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	42383593	42380383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42380400_42383600
ES.34815.2	chr9	-	4708	6	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	19.90577805563	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGTTCTGAGTGTTT	NA	False	NA	0	True	ATTAAA	-18	NA	42383551	42323610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42383361
ES.34815.3	chr9	-	4477	5	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	21.32340263654	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	42383503	42323611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42383361
ES.34815.5	chr9	-	5099	8	NNC	ENSMUSG00000037287.16	novel	4849	8	NA	NA	-2058	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.1607049947946	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42374815	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42374522
ES.34815.6	chr9	-	4340	4	NNC	ENSMUSG00000037287.16	novel	4849	8	NA	NA	-11329	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.4251842554055	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42350863	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42350600
ES.34815.7	chr9	-	3975	2	FSM	ENSMUSG00000037287.16	ENSMUST00000142775.2	2327	2	25	-1673	25	-1	multi-exon	FALSE	canonical	2	11	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	4379	False	NA	-2	True	ATTAAA	-16	NA	42339509	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42327446_42339367
ES.34815.8	chr9	-	6504	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	34	junction_6	5.96284793999944	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42383510	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42363059_42383361
ES.34815.9	chr9	-	6180	7	NNC	ENSMUSG00000037287.16	novel	4849	8	NA	NA	-2349	-1	intron_retention	FALSE	canonical	1	1	junction_6	17.7074999803912	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTGTTCTGAGTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	42375106	42323612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42355885_42361219_42361360_42362908_42363059_42375063
ES.34816.1	chr9	+	153	1	Intergenic	novelGene_28292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	42826910	42827063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_42826900_42827100
ES.34817.1	chr9	-	3616	21	FSM	ENSMUSG00000032017.15	ENSMUST00000114865.8	5887	21	-6	2277	-6	0	multi-exon	TRUE	canonical	1	2	junction_7	2.95761728423405	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTTGATGTCCTT	NA	False	NA	NA	False	ATTAAA	-33	NA	42855795	42431707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42855622
ES.34817.2	chr9	-	3491	20	NIC	ENSMUSG00000032017.15	novel	5887	21	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	3.25210351700535	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTTGTTGATGTCCT	NA	False	NA	NA	False	ATTAAA	-32	NA	42855776	42431708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42855622
ES.34817.3	chr9	-	3474	21	NNC	ENSMUSG00000032017.15	novel	5887	21	NA	NA	-45340	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	3.08990291109608	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATATTTTTGTTGATG	5223	False	NA	NA	False	ATTAAA	-28	NA	42765335	42431712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42765299
ES.34817.5	chr9	-	3335	15	NNC	ENSMUSG00000032017.15	novel	5887	21	NA	NA	-45340	-33295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.46778174112524	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATCTATGAGTTCTT	5223	False	NA	NA	False	AATAAA	-18	NA	42765335	42465002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42466557_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42765299
ES.34817.6	chr9	-	3693	11	NNC	ENSMUSG00000032017.15	novel	5887	21	NA	NA	-45312	-99464	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.89358446678636	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCTGTTGAGTGCTGCT	5251	False	NA	NA	False	AATAAA	-26	NA	42765307	42531171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42533456_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42765112
ES.34817.7	chr9	-	1675	10	NNC	ENSMUSG00000032017.15	novel	5887	21	NA	NA	-45327	-130573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.07643029507648	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGGCTTTGCTTCTTG	5236	False	NA	NA	False	AATAAA	-21	NA	42765322	42562280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42562916_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788_42719921_42730165_42730271_42732679_42732798_42765299
ES.34817.8	chr9	-	172	1	Intergenic	novelGene_28290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGAGTTGTCTAAT	NA	False	NA	NA	False	NA	NA	NA	42629107	42628935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_42628900_42629100
ES.34817.9	chr9	-	584	1	Intergenic	novelGene_28291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGACAGCCGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	42809041	42808457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_42808500_42809000
ES.34818.1	chr9	-	4368	1	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	137777	0	58451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGACTTTTTCTTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	42879505	42875137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_42875100_42879500
ES.34818.2	chr9	-	590	1	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	138903	2652	59577	-2651	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGGTTGTTCATGAGTA	NA	False	NA	NA	False	NA	NA	NA	42878379	42877789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_42877800_42878400
ES.34819.1	chr9	+	4070	8	Antisense	novelGene_ENSMUSG00000059495.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAAAAATCCTA	NA	False	NA	NA	False	NA	NA	NA	42883377	42893644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42883762_42885852_42886089_42886330_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691
ES.3482.1	chr10	-	5739	1	Intergenic	novelGene_2674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCCCAAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	84824236	84818497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84818500_84824200
ES.34820.1	chr9	+	6332	2	Antisense	novelGene_ENSMUSG00000059495.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATACCACCATGCCTGA	NA	False	NA	NA	False	NA	NA	NA	42898003	42904939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42902488_42903091
ES.34820.2	chr9	+	5403	3	Antisense	novelGene_ENSMUSG00000059495.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATACCACCATGCCTGA	NA	False	NA	NA	False	NA	NA	NA	42898003	42904939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_42900342_42901270_42902488_42903091
ES.34821.1	chr9	+	247	1	Intergenic	novelGene_28295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATACTTTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	42997464	42997711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_42997500_42997700
ES.34822.1	chr9	-	6273	40	NNC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-4	-4412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.90475850994777	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAAAGGAATGGAATGC	NA	False	NA	NA	False	NA	NA	NA	43017286	42879550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883286_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937492_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.10	chr9	-	5795	41	NNC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-22	-4962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	8.23403758796376	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017304	42880100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937492_42937526_42938492_42938592_42953886_42953973_42955559_42955584_42996214_42996276_43016473
ES.34822.12	chr9	-	6395	35	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-204	-4962	intron_retention	FALSE	canonical	0	0	junction_34	7.09506627156673	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017486	42880100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_43016473
ES.34822.13	chr9	-	4457	7	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	48345	-4963	intron_retention	FALSE	canonical	3	22	junction_3	2.88675134594813	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	42889611	42880101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42887417_42888931_42889100_42889501
ES.34822.14	chr9	-	5784	39	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-92	-4963	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	6.58257794560553	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	43017374	42880101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.15	chr9	-	4798	37	NNC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	435	-4963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	7.5069412323973	91	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCCTTGTTTTGTTTT	6973	False	NA	NA	False	NA	NA	NA	42937521	42880101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42933270_42933363_42934110_42934169_42937475
ES.34822.16	chr9	-	5787	41	NNC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	0	-4964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	7.93469438604916	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGCCTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	43017282	42880102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929344_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42951835_42951893_42953886_42953973_42955559_42955584_43016473
ES.34822.19	chr9	-	5768	39	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-91	-4993	combination_of_known_splicesites	FALSE	canonical	0	0	junction_38	7.23569368878304	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCGTATTTGAAAGCACAC	NA	False	NA	NA	False	AAAAAG	-30	NA	43017373	42880131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_43016473
ES.34822.2	chr9	-	6407	40	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-194	-4478	combination_of_known_junctions	FALSE	canonical	2	9	junction_32	5.59632639907851	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTATAATTATACATT	NA	False	NA	NA	False	TATAAA	-23	NA	43017476	42879616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.21	chr9	-	5944	38	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	0	-5008	intron_retention	FALSE	canonical	0	0	junction_17	6.91120769611548	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTGACTTCATTCCG	NA	False	NA	NA	False	TATAAA	-37	NA	43017282	42880146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.22	chr9	-	7890	39	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-177	-5009	intron_retention	FALSE	canonical	2	9	junction_32	5.57547061477121	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTGACTTCATTCC	NA	False	NA	NA	False	TATAAA	-36	NA	43017459	42880147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.25	chr9	-	5508	39	NNC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	158	-5016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_38	7.23569368878304	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATGTATTTATTTGACT	NA	False	NA	NA	False	TATAAA	-29	NA	43017124	42880154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953985_43016473
ES.34822.28	chr9	-	5183	40	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-58	-5065	combination_of_known_junctions	FALSE	canonical	2	9	junction_32	5.59632639907851	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGGGTGTAGGATATAA	NA	False	NA	NA	False	AGTAAA	-16	NA	43016839	42880203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.3	chr9	-	4376	30	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	10716	-4479	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	6.01524025612297	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTATAATTATACAT	NA	False	NA	NA	False	TATAAA	-22	NA	42927240	42879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198
ES.34822.30	chr9	-	4242	29	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-98	-17636	combination_of_known_junctions	FALSE	canonical	2	9	junction_21	5.87801160326885	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGCCGCTGAGGACATA	NA	False	NA	NA	False	NA	NA	NA	43017380	42892774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.31	chr9	-	3839	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-607	330	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGTATTAAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43017889	42935311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.32	chr9	-	2978	5	NIC	ENSMUSG00000059495.15	novel	2169	5	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAATATTGATGGCTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	43017358	42935641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.33	chr9	-	2982	6	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	-23	60504	-23	0	5prime_fragment	FALSE	canonical	0	0	junction_3	9.91160935469109	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAATATTGATGGCTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	43017305	42935641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_42937526_42938492_42938592_42951835_42951893_42953886_42953973_42955559_42955584_43016473
ES.34822.34	chr9	-	1424	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-177	3	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	5.11737237261468	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTTTGTTCTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	43017459	42937296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34822.35	chr9	-	1303	5	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-23	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.39081998549647	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACCTTTGTTCTTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	43017305	42937296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42937526_42938492_42938592_42951835_42951893_42953886_42953973_43016473
ES.34822.36	chr9	-	1302	6	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	1	62160	1	2	5prime_fragment	FALSE	canonical	0	0	junction_3	9.91160935469109	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACCTTTGTTCTTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	43017281	42937297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_42937526_42938492_42938592_42951835_42951893_42953886_42953973_42955559_42955584_43016473
ES.34822.37	chr9	-	4649	1	Intergenic	novelGene_28293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCATATATTTATACA	5543	False	NA	NA	False	NA	NA	NA	42962654	42958005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_42958000_42962700
ES.34822.38	chr9	-	175	1	Intergenic	novelGene_28294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTCTTGTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	42991690	42991515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_42991500_42991700
ES.34822.39	chr9	-	3719	1	Intergenic	novelGene_28296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAAAAAAAAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	43012199	43008480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43008500_43012200
ES.34822.40	chr9	-	6918	1	Genic_Genomic	ENSMUSG00000059495.15	novel	NA	NA	NA	NA	-176	-73241	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGGTATTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	43017458	43010540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_43010500_43017500
ES.34822.5	chr9	-	5418	38	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	147	-4479	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	6.96385324434436	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTATAATTATACAT	NA	False	NA	NA	False	TATAAA	-22	NA	43016634	42879617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42953886_42953973_42955559_42955584_43016473
ES.34822.8	chr9	-	4892	34	ISM	ENSMUSG00000059495.15	ENSMUST00000072767.7	10059	42	84789	4586	5964	-4586	internal_fragment	FALSE	canonical	3	9	junction_32	5.20648038664595	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTCCCTTGTCGTT	NA	False	NA	NA	False	ACTAAA	-20	NA	42931992	42879724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900
ES.34822.9	chr9	-	5888	40	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-156	-4962	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	6.17666708711603	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017438	42880100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ES.34823.1	chr9	-	3538	3	FSM	ENSMUSG00000048503.8	ENSMUST00000213544.2	2463	3	13	-1088	2	-1	multi-exon	FALSE	canonical	0	0	junction_2	9.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCTTCGTATCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	43027826	43019945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_43023154_43024755_43024956_43027696
ES.34823.2	chr9	-	3494	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	8	1	8	-1	multi-exon	FALSE	canonical	3	19	junction_1	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCTTCGTATCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	43027857	43019945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_43023154_43024755_43024956_43027771
ES.34823.3	chr9	-	5080	2	NIC	ENSMUSG00000048503.8	novel	3503	3	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	25	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCTGCCTTCGTATC	NA	False	NA	NA	False	AATAAA	-17	NA	43027845	43019949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_43024956_43027771
ES.34824.1	chr9	+	2149	1	Antisense	novelGene_ENSMUSG00000032015.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGCTTTTGTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	43055711	43057860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_43055700_43057900
ES.34825.1	chr9	+	4378	1	Intergenic	novelGene_28299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAGAAAACTCCCCCAA	NA	False	NA	NA	False	NA	NA	NA	43078373	43082751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43078400_43082800
ES.34826.1	chr9	-	2668	14	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	-138	5073	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.4426632546916	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGATTTCAAAGTACATC	NA	False	NA	NA	False	NA	NA	NA	43117190	43030160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43030170_43035234_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ES.34826.10	chr9	-	2457	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	234	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	23.9043231794307	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAGATGTTCAGAGGA	NA	False	NA	NA	False	CATAAA	-14	NA	43116818	43035236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116778
ES.34826.11	chr9	-	2488	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5530	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.8791523614094	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAGAGATGTTCAGAGG	5151	False	NA	NA	False	CATAAA	-13	NA	43111522	43035237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111450
ES.34826.12	chr9	-	4199	8	ISM	ENSMUSG00000032015.17	ENSMUST00000213862.2	2181	9	-1689	-298	-1689	-5	intron_retention	FALSE	canonical	3	65	junction_6	8.53324829889604	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAGAGATGTTCAGAG	7847	False	NA	NA	False	CATAAA	-12	NA	43056188	43035238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009
ES.34826.14	chr9	-	2413	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5754	-120	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTTTTTTTTTTTTTTT	5375	False	NA	NA	False	NA	NA	NA	43111298	43035353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
ES.34826.15	chr9	-	2483	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5500	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGTTTCTATATTATT	5121	False	NA	NA	False	NA	NA	NA	43111552	43035537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
ES.34826.16	chr9	-	158	1	Intergenic	novelGene_28300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43080173	43080015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43080000_43080200
ES.34826.2	chr9	-	291	1	Intergenic	novelGene_28297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAAGAGTCTTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	43033411	43033120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43033100_43033400
ES.34826.3	chr9	-	179	1	Intergenic	novelGene_28298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	43033410	43033231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43033200_43033400
ES.34826.4	chr9	-	2815	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5477	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	21.2895057611856	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCAGAGGAGTGTTTTA	5098	False	NA	NA	False	CATAAA	-22	NA	43111575	43035228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43111185
ES.34826.6	chr9	-	2984	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	5377	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	24.8791523614094	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCAGAGGAGTGTTTT	4998	False	NA	NA	False	CATAAA	-21	NA	43111675	43035229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110466_43111185
ES.34826.7	chr9	-	2583	13	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	-90	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	24.9415984518501	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCAGAGGAGTGTTT	NA	False	NA	NA	False	CATAAA	-20	NA	43117142	43035230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054061_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ES.34826.8	chr9	-	2877	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	-353	-2	-353	2	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTCAGAGGAGTGTT	NA	False	NA	NA	False	CATAAA	-19	NA	43117405	43035231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ES.34826.9	chr9	-	2245	9	NNC	ENSMUSG00000032015.17	novel	2522	13	NA	NA	-1725	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.5518360947035	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAGATGTTCAGAGGA	7811	False	NA	NA	False	CATAAA	-14	NA	43056224	43035236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056084
ES.34827.1	chr9	+	158	1	Intergenic	novelGene_28301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	43118234	43118392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43118200_43118400
ES.34828.1	chr9	+	173	1	Intergenic	novelGene_28302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAATGAACAA	NA	False	NA	NA	False	NA	NA	NA	43119047	43119220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43119000_43119200
ES.34829.1	chr9	+	6272	1	FSM	ENSMUSG00000111864.2	ENSMUST00000216693.2	434	1	-1418	-4420	-1418	4420	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTTGTACTTCATGC	NA	False	NA	NA	False	ATTAAA	-15	NA	43127000	43133272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43127000_43133300
ES.3483.1	chr10	+	398	1	Intergenic	novelGene_2676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTATTTTTGCGCT	NA	False	NA	NA	False	NA	NA	NA	84879098	84879496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84879100_84879500
ES.34830.1	chr9	-	1951	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-92	667	-92	565	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCGCCAGCTTAGGC	NA	False	NA	-2	True	AATAAA	-23	NA	43151300	43133198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
ES.34831.1	chr9	-	177	1	Intergenic	novelGene_28303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAATAAAATAG	NA	False	NA	NA	False	NA	NA	NA	43176187	43176010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43176000_43176200
ES.34832.1	chr9	+	380	3	NNC	ENSMUSG00000095385.4	novel	296	2	NA	NA	139	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAATAAACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	43176714	43191335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_43176784_43185526_43185653_43191150
ES.34833.1	chr9	+	177	1	Intergenic	novelGene_28304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGAATACC	NA	False	NA	NA	False	NA	NA	NA	43279527	43279704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43279500_43279700
ES.34834.1	chr9	-	181	1	Intergenic	novelGene_28305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	43389109	43388928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43388900_43389100
ES.34835.1	chr9	-	176	1	Intergenic	novelGene_28306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAATTCAGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	43637522	43637346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43637300_43637500
ES.34836.1	chr9	+	2676	2	Antisense	novelGene_ENSMUSG00000111129.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCACCCACAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	43641250	43646658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_43641425_43644156
ES.34837.1	chr9	-	3584	1	FSM	ENSMUSG00000111334.2	ENSMUST00000217551.2	2828	1	-1934	1178	1825	-1178	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTATAAAAAGGCTGCAGAA	NA	False	NA	NA	False	NA	NA	NA	43654926	43651342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_43651300_43654900
ES.34838.1	chr9	+	5901	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	-244	-4	-244	4	multi-exon	FALSE	canonical	3	13	junction_5	3.03315017762062	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCTCTTGTCACTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	43655036	43718762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
ES.34838.2	chr9	+	5008	6	NNC	ENSMUSG00000032012.10	novel	384	3	NA	NA	-144	0	intron_retention	FALSE	non_canonical	0	0	junction_1	7.33757453113766	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAAGTGCCTCTTGTCAC	NA	False	NA	NA	False	AATAAA	-14	NA	43655136	43718758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_43655235_43702337_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
ES.34838.3	chr9	+	2835	1	Intergenic	novelGene_28307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-34	NA	43695213	43698048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43695200_43698000
ES.34839.1	chr9	-	2065	1	Antisense	novelGene_ENSMUSG00000032012.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAACGAAGCCAAGT	NA	False	NA	NA	False	NA	NA	NA	43717535	43715470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_43715500_43717500
ES.3484.1	chr10	+	171	1	Intergenic	novelGene_2677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	84908360	84908531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_84908400_84908500
ES.34840.1	chr9	-	173	1	Intergenic	novelGene_28308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCCATTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	43724412	43724239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_43724200_43724400
ES.34841.1	chr9	+	1692	4	FSM	ENSMUSG00000032011.6	ENSMUST00000114840.2	1735	4	43	0	43	0	multi-exon	FALSE	canonical	3	7	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGTCTGTCTCTTCT	NA	False	NA	34	True	AATAAA	-20	NA	43954723	43959876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43954774_43957253_43957316_43957910_43958250_43958635
ES.34842.1	chr9	+	175	1	Intergenic	novelGene_28309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTCAAGGT	NA	False	NA	NA	False	NA	NA	NA	43968908	43969083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43968900_43969100
ES.34843.1	chr9	+	232	1	Intergenic	novelGene_28310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAACTATATACAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	43973639	43973871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_43973600_43973900
ES.34844.1	chr9	+	3896	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	-29	0	-29	0	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	43978288	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.10	chr9	+	3108	11	NIC	ENSMUSG00000032010.16	novel	2057	12	NA	NA	-31	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.9862452701852	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTGGTGTGACGGT	2217	False	NA	NA	False	AATAAA	-14	NA	43996204	44006918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43996633_44000428_44000480_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.11	chr9	+	3236	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-31	-1148	-31	-2	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTGACGGTCTTG	2217	False	NA	NA	False	AATAAA	-18	NA	43996204	44006922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.12	chr9	+	1532	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	-19	544	-19	0	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAC	2229	False	NA	NA	False	NA	NA	NA	43996216	44005230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.13	chr9	+	3995	9	NIC	ENSMUSG00000032010.16	novel	2057	12	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	22	junction_1	13.4065049509557	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCTGGTGTGACGGT	2233	False	NA	NA	False	AATAAA	-14	NA	43996220	44006918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44003198_44003381_44003486_44003572_44004107_44004423_44004545_44005070
ES.34844.14	chr9	+	3318	11	NIC	ENSMUSG00000032010.16	novel	2057	12	NA	NA	24	0	intron_retention	FALSE	canonical	3	22	junction_1	12.3207142650092	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	2283	False	NA	NA	False	AATAAA	-20	NA	43996270	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44004107_44004423_44004545_44005070
ES.34844.15	chr9	+	2893	12	NIC	ENSMUSG00000032010.16	novel	748	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.2626765016321	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	4492	False	NA	NA	False	AATAAA	-20	NA	43998479	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43998563_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.16	chr9	+	2796	11	NNC	ENSMUSG00000032010.16	novel	908	4	NA	NA	2394	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.1022098098547	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	6893	False	NA	NA	False	AATAAA	-20	NA	44000880	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44000915_44001323_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.17	chr9	+	874	8	ISM	ENSMUSG00000032010.16	ENSMUST00000176416.8	1486	12	6330	-120	-1188	53	3prime_fragment	FALSE	canonical	3	45	junction_4	7.55928946018454	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCCTGGTCAGGGTCT	8589	False	NA	NA	False	AATAAA	-29	NA	44002576	44005343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.2	chr9	+	2842	1	NIC	ENSMUSG00000032010.16	novel	3867	13	NA	NA	21	-6047	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATCCCGTAGTGAGC	NA	False	NA	NA	False	NA	NA	NA	43978338	43981180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43978300_43981200
ES.34844.3	chr9	+	2151	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	22	1694	22	0	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	43978339	44005230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.4	chr9	+	2969	12	NIC	ENSMUSG00000032010.16	novel	3867	13	NA	NA	-20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.2626765016321	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCTGGTGTGACGGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	43978354	44006920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43978518_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.6	chr9	+	3513	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	54	300	-3	-300	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCATGCTGTCCCAAGA	NA	False	NA	NA	False	NA	NA	NA	43978371	44006624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.7	chr9	+	2369	14	FSM	ENSMUSG00000032010.16	ENSMUST00000177054.8	2370	14	5	-4	5	0	multi-exon	FALSE	canonical	0	0	junction_2	21.0184478001824	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	43978379	44005230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_43978518_43979334_43979593_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.8	chr9	+	3829	13	NNC	ENSMUSG00000032010.16	novel	3867	13	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5172533996248	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	43978397	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_43978560_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34844.9	chr9	+	3830	13	NIC	ENSMUSG00000032010.16	novel	908	4	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	16.8349834174753	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	43983431	44006924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_43983595_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ES.34845.1	chr9	+	1912	1	Genic_Genomic	ENSMUSG00000097467.3	novel	NA	NA	NA	NA	-1340	-6919	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAAGGGACGTGGCA	509	False	NA	NA	False	NA	NA	NA	44022879	44024791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_44022900_44024800
ES.34846.1	chr9	-	5085	4	NNC	ENSMUSG00000053128.16	novel	2833	3	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCGAATCCAGATGTG	9260	False	NA	NA	False	AATAAA	-17	NA	44024803	44007118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44009892_44013318_44013462_44014238_44014343_44022738
ES.34846.2	chr9	-	4990	4	NNC	ENSMUSG00000053128.16	novel	2833	3	NA	NA	-4038	-2320	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTGGACATGCAGGT	3752	False	NA	NA	False	AATAAA	-19	NA	44018423	44009436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44009892_44011666_44011874_44013318_44013462_44014238
ES.34846.3	chr9	-	3379	1	Genic_Genomic	ENSMUSG00000092258.3	novel	NA	NA	NA	NA	-1368	432	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGGAGAAGGCAGAAGAC	631	False	NA	NA	False	ATTAAA	-41	NA	44021544	44018165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_44018200_44021500
ES.34846.4	chr9	-	2983	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	-2	-257	-2	257	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAACTTGTCCCTGTT	9260	False	NA	NA	False	TATAAA	-14	NA	44024803	44021820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44021800_44024800
ES.34846.5	chr9	-	2742	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	-18	0	-5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCCTTGGGAGTGGT	9244	False	NA	NA	False	AATAAA	-20	NA	44024819	44022077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44022100_44024800
ES.34847.1	chr9	+	222	1	Genic_Genomic	ENSMUSG00000097467.3	novel	NA	NA	NA	NA	3627	10	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTTTAAAAATGTACG	799	False	NA	NA	False	NA	NA	NA	44033045	44033267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_44033000_44033300
ES.34848.1	chr9	+	2928	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	61	0	-35	0	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGTTCCATTCAT	139	False	NA	19	True	AATAAA	-21	NA	44045919	44054024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ES.34848.2	chr9	+	3256	15	ISM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	121	3	22	0	intron_retention	FALSE	canonical	3	21	junction_3	5.27605294646268	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGCTGTGTTCCATT	29	False	NA	16	True	AATAAA	-18	NA	44045979	44054021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571
ES.34848.3	chr9	+	2747	15	NIC	ENSMUSG00000032135.16	novel	2772	15	NA	NA	25	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	11.5292440943782	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	32	False	NA	9	True	AATAAA	-11	NA	44045982	44054014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44046054_44047814_44047946_44048034_44048189_44048271_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44053080
ES.34848.4	chr9	+	3008	16	NIC	ENSMUSG00000032135.16	novel	1061	7	NA	NA	398	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.87543426167606	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGCTGTGTTCCATT	405	False	NA	16	True	AATAAA	-18	NA	44046355	44054021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44046573_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ES.34848.5	chr9	+	3033	15	NIC	ENSMUSG00000032135.16	novel	1061	7	NA	NA	456	-7	intron_retention	FALSE	canonical	1	1	junction_1	9.18628080901301	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	463	False	NA	9	True	AATAAA	-11	NA	44046413	44054014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44046573_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ES.34848.6	chr9	+	4556	14	NIC	ENSMUSG00000032135.16	novel	1061	7	NA	NA	459	-10	intron_retention	FALSE	canonical	1	1	junction_1	9.52418286109615	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCCAAAAGCATGATGCT	466	False	NA	6	True	AATAAA	-8	NA	44046416	44054011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44046573_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44050312_44050454_44050577_44050696_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ES.34848.8	chr9	+	4290	12	NIC	ENSMUSG00000032135.16	novel	2989	16	NA	NA	-123	-7	intron_retention	FALSE	canonical	3	21	junction_1	4.71852337176763	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	56	False	NA	9	True	AATAAA	-11	NA	44048034	44054014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44048243_44048335_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ES.34848.9	chr9	+	1270	3	ISM	ENSMUSG00000032135.16	ENSMUST00000098852.3	2772	15	5848	7	3645	-7	3prime_fragment	FALSE	canonical	0	0	junction_2	17.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCATGATGCTGTG	3824	False	NA	9	True	AATAAA	-11	NA	44051802	44054014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44051991_44052141_44052290_44053080
ES.34849.1	chr9	+	4813	1	FSM	ENSMUSG00000110966.2	ENSMUST00000214044.2	487	1	-60	-4266	-60	4266	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATACTTTTAAAGGACT	2797	False	NA	NA	False	NA	NA	NA	44091911	44096724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44091900_44096700
ES.3485.1	chr10	-	220	1	Intergenic	novelGene_2678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGTGTACAGGAGTATA	NA	False	NA	NA	False	NA	NA	NA	84917265	84917045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_84917000_84917300
ES.34850.1	chr9	-	6004	18	NNC	ENSMUSG00000034342.10	novel	3452	18	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.27352030281204	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTCTGGTTCACTT	2949	False	NA	-1	True	AATAAA	-20	NA	44145311	44054273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44055994_44056036_44057599_44062887_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.10	chr9	-	3915	2	Genic_Genomic	ENSMUSG00000034342.10	novel	11372	16	NA	NA	17	-56546	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTGTAAAGTACAGCT	2931	False	NA	NA	False	TTTAAA	-34	NA	44145329	44141217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_44141986_44142182
ES.34850.11	chr9	-	172	1	Intergenic	novelGene_28313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAAAAATACACAT	6073	False	NA	NA	False	NA	NA	NA	44142187	44142015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44142000_44142200
ES.34850.2	chr9	-	5008	18	NNC	ENSMUSG00000034342.10	novel	3452	18	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.27352030281204	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAGTTCTGGTTCACT	2985	False	NA	-2	True	AATAAA	-19	NA	44145275	44054274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44055975_44056017_44056640_44062887_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.3	chr9	-	2774	17	NIC	ENSMUSG00000034342.10	novel	3452	18	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.99804639792987	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAGTTCTGGTTCACT	2974	False	NA	-2	True	AATAAA	-19	NA	44145286	44054274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44054352_44062887_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.4	chr9	-	5113	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	7	6252	7	34	multi-exon	FALSE	canonical	1	3	junction_5	3.59382185918495	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGTAGGGAAAAG	2921	False	NA	NA	False	ATTAAA	-7	NA	44145339	44060524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.5	chr9	-	3124	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	60	8188	0	259	multi-exon	FALSE	canonical	1	3	junction_5	3.59382185918495	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGCAGTAGCAGTGCT	2974	False	NA	NA	False	ATTAAA	-25	NA	44145286	44062460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.6	chr9	-	2785	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	61	8526	1	-79	multi-exon	FALSE	canonical	1	3	junction_5	3.59382185918495	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATCCTCCGGGAATT	2975	False	NA	NA	False	NA	NA	NA	44145285	44062798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.7	chr9	-	1529	4	ISM	ENSMUSG00000034342.10	ENSMUST00000205968.2	2809	16	77	16828	77	769	5prime_fragment	FALSE	canonical	2	7	junction_2	4.18993502999218	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAACAAAAAAGGAAAAAAA	3056	False	NA	NA	False	NA	NA	NA	44145204	44079547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44080474_44084549_44084697_44112256_44112505_44144996
ES.34850.8	chr9	-	176	1	Intergenic	novelGene_28311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCGAAGTAAGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	44084448	44084272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44084300_44084400
ES.34850.9	chr9	-	4558	1	Intergenic	novelGene_28312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGGGGTGTGTAGGG	8752	False	NA	NA	False	NA	NA	NA	44139508	44134950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44135000_44139500
ES.34851.1	chr9	-	149	1	Intergenic	novelGene_28314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATGTT	NA	False	NA	NA	False	NA	NA	NA	44151518	44151369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44151400_44151500
ES.34852.1	chr9	-	2001	10	NNC	ENSMUSG00000032105.6	novel	2193	11	NA	NA	-26	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.684934889218775	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGATTTGTGTTTTAT	631	False	NA	NA	False	NA	NA	NA	44162794	44158604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44159314_44159527_44159729_44159852_44160060_44160143_44160336_44160531_44160737_44160907_44161045_44161139_44161330_44162079_44162154_44162294_44162323_44162736
ES.34853.1	chr9	-	3660	10	NIC	ENSMUSG00000032109.16	novel	3621	10	NA	NA	27	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCTGTGGTCTCCACTT	5942	False	NA	NA	False	ATTAAA	-16	NA	44179457	44164015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44164837_44165288_44165541_44166727_44166815_44167628_44168225_44173528_44174351_44174925_44175546_44175999_44176089_44176460_44176531_44177040_44177163_44179276
ES.34854.1	chr9	+	177	1	Intergenic	novelGene_28315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGACAGTA	NA	False	NA	NA	False	NA	NA	NA	44196732	44196909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44196700_44196900
ES.34855.1	chr9	-	4436	15	FSM	ENSMUSG00000032131.17	ENSMUST00000161354.9	3999	15	-438	1	-438	-1	multi-exon	TRUE	canonical	0	0	junction_2	1.34202101628971	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGGTGTGAATGTCGA	NA	False	NA	NA	False	AATAAA	-18	NA	44200350	44184485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512_44198763_44199310
ES.34856.1	chr9	+	172	1	Antisense	novelGene_ENSMUSG00000032119.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44206101	44206273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_44206100_44206300
ES.34857.1	chr9	-	7855	9	ISM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	2896	-2390	2870	2390	3prime_fragment	FALSE	canonical	3	40	junction_7	6.44204936336256	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAATGTTATGTCTT	NA	False	NA	NA	False	AATAAA	-8	NA	44214072	44201346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706
ES.34857.10	chr9	-	5814	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	14.5296631451356	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44216967	44203735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216431
ES.34857.11	chr9	-	4216	1	FSM	ENSMUSG00000111291.2	ENSMUST00000217413.2	2420	1	-4191	2395	-4191	-2395	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44207951	44203735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44203700_44208000
ES.34857.12	chr9	-	5526	12	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	23.6737466614758	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGTGTGGTGGTGCC	NA	False	NA	-2	True	NA	NA	NA	44216941	44203736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216912
ES.34857.15	chr9	-	5537	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.195689254687	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGTGTGGTGGTGCC	NA	False	NA	-2	True	NA	NA	NA	44216932	44203736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44214070_44216912
ES.34857.16	chr9	-	5547	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.3430050920464	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGTGTGGTGGTGCC	NA	False	NA	-2	True	NA	NA	NA	44216970	44203736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210649_44210859_44211090_44213706_44214070_44216912
ES.34857.17	chr9	-	5361	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	19.7284059163431	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGAGTGTGGTGGTGC	NA	False	NA	-3	True	NA	NA	NA	44216942	44203737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.19	chr9	-	5188	9	NIC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.9508878610502	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTGAGTGTGGTGGT	NA	False	NA	-5	True	NA	NA	NA	44216951	44203739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44207878_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.2	chr9	-	8026	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	-9	2228	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	14.5296631451356	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	44216952	44201508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216431
ES.34857.20	chr9	-	6166	9	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	2	-3	intron_retention	FALSE	canonical	1	1	junction_8	22.0553281544392	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTGAGTGTGGTGGT	NA	False	NA	-5	True	NA	NA	NA	44216940	44203739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44210323_44210509_44211090_44213706_44213885_44216078_44216244_44216912
ES.34857.21	chr9	-	5761	9	NIC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	1	-6	intron_retention	FALSE	canonical	3	40	junction_6	7.24568837309472	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTTGAGTGTGGT	NA	False	NA	-8	True	NA	NA	NA	44216941	44203742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.22	chr9	-	3222	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	23	1124	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	14.5296631451356	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAAGATTTTATTTA	NA	False	NA	NA	False	NA	NA	NA	44216919	44206279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216431
ES.34857.23	chr9	-	2904	10	NIC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	3	433	intron_retention	FALSE	canonical	2	6	junction_9	15.3911951741536	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTCTTAAGTTTGAT	NA	False	NA	-4	True	AATAAA	-19	NA	44216939	44206970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078
ES.34857.24	chr9	-	2075	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	24	3234	-1	433	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTCTTAAGTTTGAT	NA	False	NA	-4	True	AATAAA	-19	NA	44216944	44206970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.25	chr9	-	5133	10	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	23	433	intron_retention	FALSE	canonical	1	1	junction_6	20.7952986139763	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTCTTAAGTTTGAT	NA	False	NA	-4	True	AATAAA	-19	NA	44216919	44206970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44209924_44210169_44210323_44210509_44210622_44210859_44211090_44213706
ES.34857.26	chr9	-	2091	11	NNC	ENSMUSG00000032119.6	novel	1439	10	NA	NA	-3	385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1981131235778	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGCAGTTGTCTTTT	NA	False	NA	-52	True	NA	NA	NA	44216946	44207018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207558_44207680_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44214070_44216912
ES.34857.27	chr9	-	177	1	Intergenic	novelGene_28316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	44208277	44208100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44208100_44208300
ES.34857.28	chr9	-	5374	1	NIC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	11	29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTTTGCCAGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	44216931	44211557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44211600_44216900
ES.34857.3	chr9	-	7523	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	34	-2224	8	2224	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	44216934	44201512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.4	chr9	-	5349	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	-13	-3	-13	3	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTGTGGTGGTGCCTTT	NA	False	NA	1	True	NA	NA	NA	44216981	44203733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ES.34857.5	chr9	-	5494	10	FSM	ENSMUSG00000111291.2_ENSMUSG00000032119.6	ENSMUST00000034629.6	1439	10	1	-4056	0	2	multi-exon	FALSE	canonical	0	0	junction_9	17.1399468429099	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTGTGGTGGTGCCTT	NA	False	NA	0	True	NA	NA	NA	44216942	44203734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44214070_44216912
ES.34857.6	chr9	-	5502	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	19.8859246704799	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTGTGGTGGTGCCTT	NA	False	NA	0	True	NA	NA	NA	44216970	44203734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216912
ES.34857.7	chr9	-	5581	9	NIC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	3056	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	16.2860177759942	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44213886	44203735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44209868_44210323_44210509_44210622_44210859_44211090_44213706
ES.34857.8	chr9	-	5843	10	Fusion	ENSMUSG00000111291.2_ENSMUSG00000032119.6	novel	1439	10	NA	NA	1696	1	multi-exon	FALSE	canonical	0	0	junction_9	17.1399468429099	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44215246	44203735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44214070_44214866
ES.34857.9	chr9	-	5763	11	NNC	ENSMUSG00000032119.6	novel	5333	10	NA	NA	191	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	19.6834956245073	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTGTGGTGGTGCCT	NA	False	NA	-1	True	NA	NA	NA	44216751	44203735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216078_44216244_44216431
ES.34858.1	chr9	-	5559	1	Genic_Genomic	ENSMUSG00000032120.12	novel	NA	NA	NA	NA	1982	2938	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44223154	44217595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_44217600_44223200
ES.34858.11	chr9	-	2979	12	NNC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.0412615100421	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACGGGAGTGGCTGGT	5322	False	NA	NA	False	NA	NA	NA	44231575	44221513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227833_44228927_44228976_44230831
ES.34858.12	chr9	-	3362	14	NNC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.8390122940353	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACGGGAGTGGCTGGT	5318	False	NA	NA	False	NA	NA	NA	44231579	44221513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226435_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ES.34858.13	chr9	-	4659	6	NIC	ENSMUSG00000032120.12	novel	2808	13	NA	NA	-13	10	intron_retention	FALSE	canonical	3	36	junction_1	7.53657747256671	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTTATTTGTGTGTGT	5302	False	NA	NA	False	TTTAAA	-8	NA	44231595	44224257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44225089_44225174_44227715_44227807_44228116_44228296_44228417_44228879_44228976_44230831
ES.34858.2	chr9	-	4404	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	-7	-60	-7	60	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGTTTTTTTACTGT	5308	False	NA	NA	False	AATAGA	-19	NA	44231589	44220473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ES.34858.3	chr9	-	3369	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	-6	974	-6	0	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	5309	False	NA	NA	False	TATAAA	-1	NA	44231588	44221507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ES.34858.4	chr9	-	3270	15	NNC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	12.5055089901227	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	5347	False	NA	NA	False	TATAAA	-1	NA	44231550	44221507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831_44231229_44231289
ES.34858.6	chr9	-	3983	13	NIC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	0	-3	intron_retention	FALSE	canonical	3	36	junction_2	5.36125503548894	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGAGTGGCTGGTTAT	5315	False	NA	NA	False	NA	NA	NA	44231582	44221510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ES.34859.1	chr9	+	176	1	Intergenic	novelGene_28317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGGAAGAAAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	44234295	44234471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44234300_44234500
ES.3486.1	chr10	-	1990	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	-21	1433	-21	261	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCAGCTGACCTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	84938380	84933583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84935353_84938159
ES.34860.1	chr9	+	198	1	Intergenic	novelGene_28318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGGTGGTGGGGCAA	619	False	NA	NA	False	NA	NA	NA	44234986	44235184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44235000_44235200
ES.34861.1	chr9	+	1760	10	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	28	-287	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	86.8844841168256	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCATCCCCTCCCTCTG	2976	False	NA	24	True	AATAAA	-27	NA	44237343	44244904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44237493_44238442_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.10	chr9	+	1695	7	NIC	ENSMUSG00000032123.6	novel	2050	8	NA	NA	4	-294	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	124.874158878271	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3778	False	NA	17	True	AATAAA	-20	NA	44238145	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44239249_44239464_44240287_44240435_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.11	chr9	+	1785	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	-24	289	4	-289	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGCATCCCCTCCCTC	3778	False	NA	22	True	AATAAA	-25	NA	44238145	44244902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.12	chr9	+	4368	9	Fusion	ENSMUSG00000049932.4_ENSMUSG00000032123.6	novel	2205	9	NA	NA	-6	0	multi-exon	FALSE	canonical	3	18	junction_7	86.458714858596	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTAATGTTGAATGCT	3796	False	NA	34	True	ATTAAA	-30	NA	44238163	44247374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243956_44244112_44244269_44244353
ES.34861.13	chr9	+	4341	9	FSM	ENSMUSG00000049932.4_ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	41	-2177	13	0	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTAATGTTGAATGCT	3815	False	NA	34	True	ATTAAA	-30	NA	44238182	44247374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.14	chr9	+	1706	8	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	26	-292	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	94.7620004785351	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTAGCATCCCCTCC	3828	False	NA	19	True	AATAAA	-22	NA	44238195	44244899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44238848_44238970_44239249_44239464_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.15	chr9	+	1975	8	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	68	-293	intron_retention	FALSE	canonical	3	223	junction_1	29.3910995829329	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGTAGCATCCCCTC	3870	False	NA	18	True	AATAAA	-21	NA	44238237	44244898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44244269_44244353
ES.34861.16	chr9	+	1803	9	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	80	-296	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	86.458714858596	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTAGTGTAGCATCCC	3882	False	NA	15	True	AATAAA	-18	NA	44238249	44244895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243956_44244112_44244269_44244353
ES.34861.17	chr9	+	1760	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	138	307	110	-301	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTCCTCTAGTGTAGC	3912	False	NA	10	True	AATAAA	-13	NA	44238279	44244890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.18	chr9	+	4925	8	Fusion	ENSMUSG00000049932.4_ENSMUSG00000032123.6	novel	2205	9	NA	NA	124	-6	intron_retention	FALSE	canonical	3	223	junction_1	30.5934500126002	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGGTTTAATGTTG	3926	False	NA	28	True	ATTAAA	-24	NA	44238293	44247368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.19	chr9	+	2899	1	NIC	ENSMUSG00000032123.6	novel	997	7	NA	NA	-545	450	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGTGTCATTTCACAC	4367	False	NA	NA	False	NA	NA	NA	44238734	44241633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238700_44241600
ES.34861.2	chr9	+	1897	10	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-14	-284	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	85.6912344077327	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCCCCTCCCTCTGTCC	3466	False	NA	27	True	AATAAA	-30	NA	44237833	44244907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238117_44238442_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.20	chr9	+	1564	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	687	300	-451	-294	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	4461	False	NA	17	True	AATAAA	-20	NA	44238828	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.21	chr9	+	1742	9	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-450	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.308587387174	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	4462	False	NA	17	True	AATAAA	-20	NA	44238829	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44238970_44239249_44239464_44240287_44240435_44240708_44240888_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.22	chr9	+	1840	8	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	705	6	-433	0	3prime_fragment	FALSE	canonical	3	234	junction_1	26.2880433750745	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	4479	False	NA	NA	False	AATAAA	-26	NA	44238846	44245191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.23	chr9	+	1447	8	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-431	-298	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	97.7466529517267	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTCTAGTGTAGCATC	4481	False	NA	13	True	AATAAA	-16	NA	44238848	44244893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.24	chr9	+	1459	7	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-431	-294	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	96.646693338848	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	4481	False	NA	17	True	AATAAA	-20	NA	44238848	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238970_44239249_44239464_44240287_44240435_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.25	chr9	+	5288	6	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-426	637	intron_retention	FALSE	canonical	3	18	junction_4	104.75304291523	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACCAATCACTGGGCGC	4486	False	NA	NA	False	NA	NA	NA	44238853	44245834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44238970_44239249_44242500_44243200_44243390_44243859_44243956_44244112_44244269_44244353
ES.34861.26	chr9	+	1586	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-2	-200	-2	200	mono-exon	FALSE	NA	NA	NA	NA	NA	731	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	5251	False	NA	NA	False	NA	NA	NA	44245988	44247574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44246000_44247600
ES.34861.27	chr9	+	567	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	-2	819	-2	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	706	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCCCTCACAGAAAGAGC	5251	False	NA	NA	False	NA	NA	NA	44245988	44246555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44246000_44246600
ES.34861.28	chr9	+	1374	2	Genic_Genomic	ENSMUSG00000049932.4	novel	1384	1	NA	NA	2	13639	multi-exon	FALSE	non_canonical	0	0	junction_1	0	731	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTGTTGCATA	5255	False	NA	NA	False	NA	NA	NA	44245992	44261013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_44247351_44260997
ES.34861.3	chr9	+	1875	10	NNC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	6	-294	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	109.128647606369	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3486	False	NA	17	True	AATAAA	-20	NA	44237853	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44238117_44238442_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243956_44244112_44244269_44244353
ES.34861.4	chr9	+	2500	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	-231	-64	50	64	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTCCCTCCCTTTAAT	3543	False	NA	NA	False	ATTAAA	-30	NA	44237910	44245261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.5	chr9	+	2037	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	-34	202	-34	-196	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATATGCCAAGTCTGGT	3740	False	NA	115	True	NA	NA	NA	44238107	44244995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.6	chr9	+	2627	8	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-21	-294	intron_retention	FALSE	canonical	3	223	junction_1	30.5934500126002	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3753	False	NA	17	True	AATAAA	-20	NA	44238120	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.7	chr9	+	2094	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	-47	3	-19	-3	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAAAAGATCACAGTGC	3755	False	NA	NA	False	AATAAA	-23	NA	44238122	44245188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34861.8	chr9	+	1835	8	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	-18	-294	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	96.7610142441212	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTAGTGTAGCATCCCCT	3756	False	NA	17	True	AATAAA	-20	NA	44238123	44244897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44244112_44244269_44244353
ES.34861.9	chr9	+	2174	8	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	4	-301	intron_retention	FALSE	canonical	3	223	junction_1	28.5242467571227	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTCCTCTAGTGTAGC	3778	False	NA	10	True	AATAAA	-13	NA	44238145	44244890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44238503_44238848_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ES.34862.1	chr9	-	3073	13	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	58	77	intron_retention	FALSE	canonical	3	699	junction_4	89.592906465238	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCCTTCAATTCCTACA	1466	False	NA	86	True	NA	NA	NA	44255467	44247558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34862.10	chr9	-	1867	11	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	54	2	intron_retention	FALSE	canonical	3	20	junction_9	270.689656248627	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1462	False	NA	-2	True	AATAAA	-22	NA	44255471	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44253314_44253369_44255306
ES.34862.11	chr9	-	1434	13	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	40	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	253.873437409711	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1448	False	NA	-2	True	AATAAA	-22	NA	44255485	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34862.12	chr9	-	1568	14	NNC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	245.460272879605	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGAGTCTGAGACCTT	1448	False	NA	-4	True	AATAAA	-20	NA	44255485	44247648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44248143_44248222_44248310_44248414_44248485_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34862.13	chr9	-	1502	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	45	58	45	13	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAGTTGGGGAAGATATG	1453	False	NA	-49	True	AATAAA	-25	NA	44255480	44247693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34862.14	chr9	-	4528	8	NIC	ENSMUSG00000032126.17	novel	1534	14	NA	NA	62	4	intron_retention	FALSE	canonical	3	769	junction_6	53.9784537513604	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCTGATAGAGTTGGG	1470	False	NA	-58	True	AATAAA	-16	NA	44255463	44247702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252996_44253314
ES.34862.2	chr9	-	4730	4	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	17	76	intron_retention	FALSE	canonical	3	769	junction_1	54.9322815433289	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCCTTCAATTCCTAC	1425	False	NA	85	True	NA	NA	NA	44255508	44247559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44251023_44251984_44252996_44253314_44253369_44255306
ES.34862.3	chr9	-	1667	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	14	-76	14	76	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCCTTCAATTCCTAC	1422	False	NA	85	True	NA	NA	NA	44255511	44247559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34862.4	chr9	-	3180	6	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	44	76	intron_retention	FALSE	canonical	3	769	junction_2	81.2123143371743	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCCTTCAATTCCTAC	1452	False	NA	85	True	NA	NA	NA	44255481	44247559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44249326_44250774_44251023_44251984_44252063_44252372_44252429_44252511_44253369_44255306
ES.34862.6	chr9	-	1841	11	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	40	2	intron_retention	FALSE	canonical	3	20	junction_9	265.988138833295	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1448	False	NA	-2	True	AATAAA	-22	NA	44255485	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44253314_44253369_44255306
ES.34862.7	chr9	-	1467	13	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	54	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	249.077004491917	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1462	False	NA	-2	True	AATAAA	-22	NA	44255471	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44253314_44253369_44255306
ES.34862.8	chr9	-	1403	12	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	62	2	combination_of_known_splicesites	FALSE	canonical	2	13	junction_9	328.372143250322	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1470	False	NA	-2	True	AATAAA	-22	NA	44255463	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252511_44252562_44253314_44253369_44255306
ES.34862.9	chr9	-	1908	12	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	46	2	intron_retention	FALSE	canonical	3	769	junction_6	72.0391307806831	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGTCTGAGACCTTTC	1454	False	NA	-2	True	AATAAA	-22	NA	44255479	44247646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44248143_44248222_44248310_44248414_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ES.34863.1	chr9	-	3769	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	11	46	intron_retention	FALSE	non_canonical	0	0	junction_14	60.350380009963	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCCTTGCCTGTGGTCTT	6389	False	NA	15	True	NA	NA	NA	44272956	44259178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271280_44272736
ES.34863.10	chr9	-	3196	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	4	-157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	59.6119302004408	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTTCCAGGTGTTTCT	6382	False	NA	-18	True	AATAAA	-36	NA	44272963	44259381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.12	chr9	-	3576	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	3	-160	intron_retention	FALSE	non_canonical	0	0	junction_9	61.6856745847818	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACTTTCCAGGTGTT	6407	False	NA	-21	True	AATAAA	-33	NA	44272938	44259384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.13	chr9	-	3040	15	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-160	intron_retention	FALSE	canonical	0	0	junction_14	77.2354272629458	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACTTTCCAGGTGTT	6411	False	NA	-21	True	AATAAA	-33	NA	44272934	44259384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271244_44272861
ES.34863.14	chr9	-	3115	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-11	-160	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_10	54.9276696109428	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACTTTCCAGGTGTT	6393	False	NA	-21	True	AATAAA	-33	NA	44272952	44259384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.15	chr9	-	2080	10	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-5	-161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.4365257139738	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGACTTTCCAGGTGT	6399	False	NA	-22	True	AATAAA	-32	NA	44272946	44259385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259876_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.16	chr9	-	3300	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	-161	intron_retention	FALSE	non_canonical	0	0	junction_9	80.5504341948545	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGACTTTCCAGGTGT	6390	False	NA	-22	True	AATAAA	-32	NA	44272955	44259385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267511_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271282_44272739
ES.34863.19	chr9	-	4405	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-3	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	74.7007065264818	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6401	False	NA	-27	True	AATAAA	-27	NA	44272944	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44272709_44272861
ES.34863.2	chr9	-	3375	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	9	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	59.6119302004408	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACGTCCTGAGTTCTA	6387	False	NA	-4	True	NA	NA	NA	44272958	44259197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.20	chr9	-	3091	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	-166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	81.7265537743807	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6390	False	NA	-27	True	AATAAA	-27	NA	44272955	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264461_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.22	chr9	-	4739	13	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	13	-166	intron_retention	FALSE	canonical	3	20	junction_8	59.5008753437012	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6427	False	NA	-27	True	AATAAA	-27	NA	44272918	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135
ES.34863.23	chr9	-	3116	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	-166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	78.7458358687408	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6390	False	NA	-27	True	AATAAA	-27	NA	44272955	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260262_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.25	chr9	-	4425	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	1	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.9058428276167	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6412	False	NA	-27	True	AATAAA	-27	NA	44272933	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265327_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44272709_44272861
ES.34863.26	chr9	-	4962	14	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	1	-166	intron_retention	FALSE	canonical	3	20	junction_9	57.5225193875094	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6405	False	NA	-27	True	AATAAA	-27	NA	44272940	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135
ES.34863.28	chr9	-	3843	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	-166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	74.7007065264818	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6390	False	NA	-27	True	AATAAA	-27	NA	44272955	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272010
ES.34863.29	chr9	-	3217	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	11	-166	intron_retention	FALSE	non_canonical	3	20	junction_9	56.8454761899776	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6389	False	NA	-27	True	AATAAA	-27	NA	44272956	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.3	chr9	-	3301	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.2644521823023	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCAGGTGACAAATATC	6405	False	NA	-24	True	NA	NA	NA	44272940	44259217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265327_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.30	chr9	-	5415	13	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-8	-166	intron_retention	FALSE	canonical	3	187	junction_5	19.7784605063185	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6396	False	NA	-27	True	AATAAA	-27	NA	44272949	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135
ES.34863.31	chr9	-	3198	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-11	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.8132638378827	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6393	False	NA	-27	True	AATAAA	-27	NA	44272952	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260185_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271276_44272724
ES.34863.32	chr9	-	3137	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-8	-166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.2644521823023	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6396	False	NA	-27	True	AATAAA	-27	NA	44272949	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265327_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.34	chr9	-	3544	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-2	-166	intron_retention	FALSE	non_canonical	3	187	junction_5	20.3775586849648	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6402	False	NA	-27	True	AATAAA	-27	NA	44272943	44259390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.36	chr9	-	3279	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	11	-171	intron_retention	FALSE	non_canonical	0	0	junction_9	61.7002298808273	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6389	False	NA	-32	True	AATAAA	-22	NA	44272956	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.37	chr9	-	1578	9	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	-171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.412451615607	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6390	False	NA	-32	True	AATAAA	-22	NA	44272955	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259569_44266309_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271283_44272737
ES.34863.38	chr9	-	3150	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	1	-171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	78.6671186427694	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6412	False	NA	-32	True	AATAAA	-22	NA	44272933	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271039_44271131_44271281_44272737
ES.34863.39	chr9	-	3639	14	NNC	ENSMUSG00000032127.10	novel	3812	14	NA	NA	2	-171	intron_retention	FALSE	non_canonical	3	187	junction_5	20.5331309705953	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6406	False	NA	-32	True	AATAAA	-22	NA	44272939	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.4	chr9	-	3279	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	74.7007065264818	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGCCCTCAGGTGACAA	6390	False	NA	-29	True	NA	NA	NA	44272955	44259222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272742
ES.34863.40	chr9	-	6405	9	NNC	ENSMUSG00000032127.10	novel	3812	14	NA	NA	11	-171	intron_retention	FALSE	non_canonical	3	218	junction_6	11.7732482773447	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6389	False	NA	-32	True	AATAAA	-22	NA	44272956	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44266448_44266995_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.42	chr9	-	3432	15	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	2	-171	intron_retention	FALSE	non_canonical	0	0	junction_6	78.7470763953579	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTTTATGGAGACT	6406	False	NA	-32	True	AATAAA	-22	NA	44272939	44259395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265327_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44271045_44271135_44271281_44272737
ES.34863.45	chr9	-	3066	16	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	2	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.4744962585832	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAGACTTTATGGAGA	6406	False	NA	-34	True	AATAAA	-20	NA	44272939	44259397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264562_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.46	chr9	-	3202	7	NIC	ENSMUSG00000032127.10	novel	3812	14	NA	NA	1801	-180	intron_retention	FALSE	canonical	3	208	junction_4	12.9314431608472	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGACTGAAAAAGACTTT	7940	False	NA	-41	True	AATAAA	-13	NA	44267608	44259404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44265589_44265705_44265853_44266260_44266448_44266995
ES.34863.47	chr9	-	3726	13	NNC	ENSMUSG00000032127.10	novel	3812	14	NA	NA	1	-181	intron_retention	FALSE	non_canonical	3	187	junction_4	21.317051078108	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGGACTGAAAAAGACTT	6412	False	NA	-42	True	AATAAA	-12	NA	44272933	44259405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.48	chr9	-	1107	6	NNC	ENSMUSG00000032127.10	novel	2977	14	NA	NA	3683	-346	intron_retention	FALSE	canonical	0	0	junction_1	89.7672546087937	275	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTTTCTTCCTGTTTT	9822	False	NA	NA	False	NA	NA	NA	44265726	44263703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44263793_44263866_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705
ES.34863.5	chr9	-	3908	13	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	12	2	intron_retention	FALSE	non_canonical	3	20	junction_7	61.0898700458777	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGCCCTCAGGTGACAA	6390	False	NA	-29	True	NA	NA	NA	44272955	44259222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264652_44265133_44265296_44265399_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.6	chr9	-	4286	14	NNC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_8	85.0091537013382	279	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGCCCTCAGGTGACAA	6405	False	NA	-29	True	NA	NA	NA	44272940	44259222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44266448_44266995_44267727_44267836_44267889_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271281_44272737
ES.34863.8	chr9	-	3180	16	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	-8	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	77.9168787875901	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGCCCTCAGGTGACAA	6396	False	NA	-29	True	NA	NA	NA	44272949	44259222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271244_44272861
ES.34864.1	chr9	-	167	1	Intergenic	novelGene_28319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAACAAACTATT	2983	False	NA	NA	False	NA	NA	NA	44276362	44276195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44276200_44276400
ES.34865.1	chr9	+	177	1	Intergenic	novelGene_28320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAGAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	44284499	44284676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44284500_44284700
ES.34866.1	chr9	+	176	1	Intergenic	novelGene_28321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAACAGGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	44288885	44289061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44288900_44289100
ES.34867.1	chr9	-	817	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	40	-39	40	39	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGGTGGTGGCCTTAA	NA	False	NA	NA	False	NA	NA	NA	44290707	44289890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44289900_44290700
ES.34868.1	chr9	+	4476	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	-45	1	-45	-1	multi-exon	TRUE	canonical	3	476	junction_1	89.8853847964173	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTGCTTCTTCCCTC	NA	False	NA	6	True	AATAAA	-22	NA	44290741	44303665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.10	chr9	+	4449	25	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-3	-6	intron_retention	FALSE	canonical	2	20	junction_13	176.490315873768	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGTTGTATGTGTTTG	NA	False	NA	-5	True	AATAAA	-11	NA	44290839	44303654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.12	chr9	+	7216	1	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-3	688	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	944	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCACTTAGAATTTTC	NA	False	NA	NA	False	NA	NA	NA	44290839	44298055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290800_44298100
ES.34868.14	chr9	+	3704	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	176.012304572569	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGTGTTTGCTTCTTC	NA	False	NA	2	True	AATAAA	-18	NA	44290842	44303661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44302584_44303250
ES.34868.16	chr9	+	4357	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	179.381042476623	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290844	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299311_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.19	chr9	+	4365	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	178.258885893523	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290851	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297009_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.2	chr9	+	4316	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	179.445795715586	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290798	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296510_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.20	chr9	+	4429	25	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	20	junction_13	177.40227650268	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290851	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300925_44302132_44302184_44302285
ES.34868.22	chr9	+	3746	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-1	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	176.012304572569	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290852	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44302914_44303525
ES.34868.24	chr9	+	4219	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	179.463627512652	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGTTGTATGTGTTTG	NA	False	NA	-5	True	AATAAA	-11	NA	44290854	44303654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300636_44300873_44300925_44302132_44302184_44302285
ES.34868.25	chr9	+	4857	23	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	-2	intron_retention	FALSE	canonical	3	476	junction_1	87.0371821371773	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290854	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.26	chr9	+	4290	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	176.012304572569	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTTGTATGTGTTTGC	NA	False	NA	-4	True	AATAAA	-12	NA	44290854	44303655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300603_44300665_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.29	chr9	+	4497	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	-6	-2	-6	2	multi-exon	FALSE	canonical	3	92	junction_1	153.155429547894	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290863	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.3	chr9	+	4379	26	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	2	20	junction_13	173.83231460232	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290798	44303659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.31	chr9	+	4100	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.211047212348	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTTGTATGTGTTTGC	NA	False	NA	-4	True	AATAAA	-12	NA	44290865	44303655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290897_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44302905_44303150
ES.34868.32	chr9	+	4281	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	176.012304572569	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGTTGTATGTGTTTG	NA	False	NA	-5	True	AATAAA	-11	NA	44290866	44303654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44303027_44303085
ES.34868.33	chr9	+	4312	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	178.909121064299	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTATGTGTTTGCTTCT	NA	False	NA	0	True	AATAAA	-16	NA	44290867	44303659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293781_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.34	chr9	+	4302	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	179.254679157895	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290869	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292589_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.35	chr9	+	4359	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	178.909121064299	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGTATGTGTTTGCT	NA	False	NA	-3	True	AATAAA	-13	NA	44290869	44303656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293729_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.36	chr9	+	4215	25	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_19	180.960170571685	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTTGTATGTGTTTGC	NA	False	NA	-4	True	AATAAA	-12	NA	44290869	44303655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.37	chr9	+	5516	24	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	1	-4	intron_retention	FALSE	canonical	3	722	junction_5	52.5302685271186	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGTATGTGTTTGCT	NA	False	NA	-3	True	AATAAA	-13	NA	44290870	44303656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.38	chr9	+	4687	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	-49	-1264	1	3	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTTTGCTTCTTCCC	NA	False	NA	4	True	AATAAA	-20	NA	44290870	44303663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.41	chr9	+	4230	25	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	182.140508757815	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290870	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292669_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.43	chr9	+	4496	25	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	-3	intron_retention	FALSE	canonical	3	476	junction_1	91.6268095167687	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290870	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.44	chr9	+	4390	25	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1	-3	intron_retention	FALSE	canonical	2	20	junction_12	177.210322114399	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290870	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.45	chr9	+	4256	27	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	176.012304572569	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290871	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44303021_44303103
ES.34868.48	chr9	+	4418	26	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	163.052806170271	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290877	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290974_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.49	chr9	+	4472	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.771375679176	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290889	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291045_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.5	chr9	+	4256	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	36	140	-20	-134	multi-exon	FALSE	canonical	3	476	junction_1	89.8853847964173	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCACTGTTCCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	44290822	44303526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.51	chr9	+	3746	22	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	239.791245190147	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATGTGTTTGCTTCTTC	NA	False	NA	2	True	AATAAA	-18	NA	44290892	44303661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290974_44291809_44291908_44292112_44292207_44292350_44292392_44295493_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.52	chr9	+	4761	25	NIC	ENSMUSG00000032115.15	novel	3374	26	NA	NA	15	-3	intron_retention	FALSE	canonical	3	130	junction_1	149.408503913488	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290895	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300925_44302132_44302184_44302285
ES.34868.53	chr9	+	4936	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	168.314971407775	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44290896	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291516_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.54	chr9	+	5233	25	ISM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	112	4	18	2	3prime_fragment	FALSE	canonical	3	624	junction_12	63.8389357854767	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290898	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.55	chr9	+	4630	24	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	92	junction_1	159.317281609001	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290901	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.56	chr9	+	4244	23	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.208014468646	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290901	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291204_44292650_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300878_44300925_44302132_44302184_44302285
ES.34868.57	chr9	+	4609	26	NNC	ENSMUSG00000032115.15	novel	3374	26	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	211.216946289828	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGTATGTGTTTGCT	NA	False	NA	-3	True	AATAAA	-13	NA	44290902	44303656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292589_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.58	chr9	+	4565	27	NNC	ENSMUSG00000032115.15	novel	3374	26	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	207.397097889574	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGTATGTGTTTGCT	NA	False	NA	-3	True	AATAAA	-13	NA	44290902	44303656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44303059_44303141
ES.34868.60	chr9	+	4414	27	NNC	ENSMUSG00000032115.15	novel	3374	26	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	207.397097889574	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290916	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285_44302925_44303146
ES.34868.61	chr9	+	4371	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	169.771375679176	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTTGTATGTGTTTGC	NA	False	NA	-4	True	AATAAA	-12	NA	44290916	44303655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44290968_44291804_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.62	chr9	+	4549	25	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	-3	2	intron_retention	FALSE	canonical	3	92	junction_1	156.312981751001	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44290916	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300925_44302132_44302184_44302285
ES.34868.64	chr9	+	4618	26	NNC	ENSMUSG00000032115.15	novel	3374	26	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	210.642164819867	1040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44290922	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292362_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.68	chr9	+	4220	24	ISM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	1242	3	286	-3	3prime_fragment	FALSE	canonical	3	624	junction_11	60.4726500069724	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44292111	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.69	chr9	+	4048	22	ISM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	1680	2	724	-2	3prime_fragment	FALSE	canonical	3	624	junction_9	62.5504784815963	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44292549	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.71	chr9	+	3656	18	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	1999	-2	intron_retention	FALSE	canonical	2	20	junction_6	192.029571684634	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44293824	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.72	chr9	+	3517	18	ISM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	4535	3	3579	-3	3prime_fragment	FALSE	canonical	3	624	junction_5	64.5618182341732	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGTATGTGTTTGCTT	NA	False	NA	-2	True	AATAAA	-14	NA	44295404	44303657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.73	chr9	+	3331	17	ISM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	4861	-2	3905	2	3prime_fragment	FALSE	canonical	3	624	junction_4	65.514520098601	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTTTGCTTCTTCC	NA	False	NA	3	True	AATAAA	-19	NA	44295730	44303662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.74	chr9	+	3556	15	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	3968	-2	intron_retention	FALSE	canonical	3	624	junction_4	69.1993570808874	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44295793	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44300223_44300334_44300420_44300527_44300925_44302132_44302184_44302285
ES.34868.77	chr9	+	1936	6	ISM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	9218	2	-1870	-2	3prime_fragment	FALSE	canonical	3	779	junction_3	22.0054538694388	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGTATGTGTTTGCTTC	NA	False	NA	-1	True	AATAAA	-15	NA	44300087	44303658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ES.34868.8	chr9	+	4556	24	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	-3	-6	intron_retention	FALSE	canonical	2	20	junction_12	180.646622632229	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGGTTGTATGTGTTTG	NA	False	NA	-5	True	AATAAA	-11	NA	44290839	44303654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132
ES.34869.1	chr9	+	2137	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	-6	-3	-6	3	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCAGTGGCTCATCC	NA	False	NA	NA	False	AATAAA	-16	NA	44308142	44314260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.34869.10	chr9	+	3702	4	NIC	ENSMUSG00000032114.10	novel	2086	8	NA	NA	0	2	intron_retention	FALSE	canonical	3	26	junction_3	3.85861230093008	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTCAGTGGCTCATC	NA	False	NA	NA	False	AATAAA	-15	NA	44309479	44314259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44311336_44311785_44312832_44313369_44313509_44313598
ES.34869.2	chr9	+	3200	8	FSM	ENSMUSG00000032114.10	ENSMUST00000165839.3	2086	8	-1117	3	-36	3	multi-exon	FALSE	canonical	3	14	junction_1	6.22044030202207	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCAGTGGCTCATCC	NA	False	NA	NA	False	AATAAA	-16	NA	44308355	44314260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.34869.3	chr9	+	2357	9	NNC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.0305600451517	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGTCAGTGGCTCATC	NA	False	NA	NA	False	AATAAA	-15	NA	44308372	44314259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312721_44312832_44313369_44313509_44313598
ES.34869.4	chr9	+	2389	9	NIC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	-19	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.7740740252177	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCAGTGGCTCATCC	NA	False	NA	NA	False	AATAAA	-16	NA	44308372	44314260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44308771_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.34869.5	chr9	+	3414	6	NIC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	-19	73	intron_retention	FALSE	canonical	2	5	junction_1	10.1074230147946	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCATCAGCTTCTGTT	NA	False	NA	NA	False	TTTAAA	-19	NA	44308372	44313971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44308771_44309564_44310779_44311091_44311336_44311785_44312832_44313369_44313509_44313598
ES.34869.7	chr9	+	3090	9	NNC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.8506328944913	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	44308401	44314263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44309467_44309564_44309919_44310514_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.34869.8	chr9	+	3751	7	NNC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	251	3	intron_retention	FALSE	canonical	0	0	junction_1	10.975983884018	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCAGTGGCTCATCC	NA	False	NA	NA	False	AATAAA	-16	NA	44308646	44314260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44309467_44309564_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.34869.9	chr9	+	2771	9	NNC	ENSMUSG00000032114.10	novel	2344	9	NA	NA	291	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0716185392418	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCAGTGGCTCATCC	NA	False	NA	NA	False	AATAAA	-16	NA	44308686	44314260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44309467_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ES.3487.1	chr10	+	3791	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	-19	-156	-19	156	multi-exon	FALSE	canonical	3	175	junction_1	7	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACACAAAAACTAAAAGTC	NA	False	NA	NA	False	AGTAAA	-5	NA	84938471	84953605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271
ES.3487.11	chr10	+	3568	1	Genic_Genomic	ENSMUSG00000060935.7	novel	NA	NA	NA	NA	15148	840	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	84953754	84957322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_84953800_84957300
ES.3487.3	chr10	+	3535	3	NNC	ENSMUSG00000060935.7	novel	3616	3	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATGTTTCATAAAGA	NA	False	NA	18	True	AATAAA	-18	NA	84938576	84953450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_84938866_84946662_84946730_84950271
ES.3487.4	chr10	+	1788	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	116	1712	0	-1712	multi-exon	FALSE	canonical	3	175	junction_1	7	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTGACTCTTCAAATGA	NA	False	NA	NA	False	AATAAA	-19	NA	84938606	84951737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271
ES.3487.5	chr10	+	3298	4	FSM	ENSMUSG00000060935.7	ENSMUST00000216771.2	1200	4	19	-2117	19	2117	multi-exon	FALSE	canonical	0	0	junction_3	85.985786939212	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTGTCTTTTCATTGT	NA	False	NA	NA	False	AAAAAG	-12	NA	84938625	84958599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271_84950752_84956084
ES.3487.6	chr10	+	2697	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	138	781	22	-781	multi-exon	FALSE	canonical	3	175	junction_1	7	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCATTTATTTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	84938628	84952668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271
ES.3487.7	chr10	+	2393	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	138	1085	22	-1085	multi-exon	FALSE	canonical	3	175	junction_1	7	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGAATTCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	84938628	84952364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271
ES.3487.9	chr10	+	8591	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	170	-5145	54	2112	multi-exon	FALSE	canonical	3	175	junction_1	7	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGCTTGTCTTTTC	NA	False	NA	NA	False	AAAAAG	-7	NA	84938660	84958594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_84938862_84946662_84946730_84950271
ES.34870.1	chr9	+	142	1	Intergenic	novelGene_28322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	44316211	44316353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44316200_44316400
ES.34871.1	chr9	+	600	6	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	4997.31294197192	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATGGGTGCATCTGTT	NA	False	NA	90	True	AATAAA	-15	NA	44318413	44321487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44318548_44319012_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.11	chr9	+	522	4	FSM	ENSMUSG00000009927.10	ENSMUST00000215610.2	703	4	176	5	-122	0	multi-exon	FALSE	canonical	3	5317	junction_3	3495.27194936245	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44319185	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.2	chr9	+	1065	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	-18	233	-18	0	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGCATCTGTTTCCT	NA	False	NA	94	True	AATAAA	-19	NA	44318417	44321491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.3	chr9	+	692	6	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5000.9953969185	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318423	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44318497_44318858_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.4	chr9	+	1144	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216867.2	577	4	-567	0	-9	0	multi-exon	FALSE	canonical	3	11233	junction_1	829.827692958002	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318426	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250
ES.34871.5	chr9	+	533	5	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_1	5317.72589435559	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318437	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44318548_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.7	chr9	+	719	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	539	22	-17	-22	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGGAGGTAGCCAGTTAA	NA	False	NA	25	True	AATAAA	-27	NA	44318974	44321702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ES.34871.8	chr9	+	311	5	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4881.10195037965	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318992	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44319055_44319284_44319381_44319982_44320035_44321292_44321350_44321442
ES.34871.9	chr9	+	1569	4	NIC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	5317	junction_3	3003.91644357828	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318992	44321486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44319055_44319284_44319381_44319982_44321350_44321442
ES.34872.1	chr9	-	2276	7	NNC	ENSMUSG00000032112.11	novel	1220	5	NA	NA	28	5561	intron_retention	FALSE	canonical	0	0	junction_1	388.805006826472	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTTTGTCTGCACAA	1769	False	NA	NA	False	ATTAAA	-11	NA	44318601	44309433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44310798_44313622_44313806_44315250_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ES.34872.10	chr9	-	1611	3	NIC	ENSMUSG00000032112.11	novel	1220	5	NA	NA	-19	0	intron_retention	FALSE	canonical	3	851	junction_2	11	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTCCTAACTGAT	2012	False	NA	-8	True	AATAAA	-17	NA	44318358	44315055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44315396_44315630_44316644_44318100
ES.34872.12	chr9	-	1532	1	FSM	ENSMUSG00000032112.11	ENSMUST00000215731.2	1339	1	-173	-20	65	20	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGAAAGAAAGTCTTC	1538	False	NA	NA	False	NA	NA	NA	44318832	44317300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44317300_44318800
ES.34872.2	chr9	-	2866	3	NNC	ENSMUSG00000032112.11	novel	1185	4	NA	NA	-3	569	intron_retention	FALSE	non_canonical	0	0	junction_1	278	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCC	1708	False	NA	NA	False	NA	NA	NA	44318662	44314425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44316233_44317455_44318276_44318423
ES.34872.4	chr9	-	1204	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	21	-5	21	5	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAACTGATCATTT	1494	False	NA	-3	True	AATAAA	-22	NA	44318876	44315050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ES.34872.6	chr9	-	1274	4	FSM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	-83	-6	-53	4	multi-exon	FALSE	canonical	3	556	junction_3	146.917210246678	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCCTAACTGATCATT	1658	False	NA	-4	True	AATAAA	-21	NA	44318712	44315051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44315758_44316539_44316644_44318100_44318276_44318423
ES.34872.8	chr9	-	857	4	NIC	ENSMUSG00000032112.11	novel	1220	5	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	346.786197341628	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTCCTAACTGATC	1733	False	NA	-7	True	AATAAA	-18	NA	44318637	44315054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44315396_44315630_44315758_44318100_44318276_44318423
ES.34872.9	chr9	-	3555	1	FSM	ENSMUSG00000032112.11	ENSMUST00000215731.2	1339	1	50	-2266	20	1	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTCCTAACTGATC	1761	False	NA	-7	True	AATAAA	-18	NA	44318609	44315054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44315100_44318600
ES.34873.1	chr9	-	1233	10	ISM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	565	-1	0	1	intron_retention	FALSE	canonical	3	28	junction_6	11.8925228091197	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGATTGAACCTGTAAAA	8975	False	NA	1	True	AATAAA	-22	NA	44329301	44321454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929
ES.34873.11	chr9	-	2898	10	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	36	junction_5	10.0995049383621	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	8935	False	NA	-2	True	AATAAA	-19	NA	44329341	44321457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.12	chr9	-	1298	10	NNC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_4	19.236025872254	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	8988	False	NA	-2	True	AATAAA	-19	NA	44329288	44321457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323792_44324213_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.13	chr9	-	3257	8	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	40	junction_5	8.58332507759989	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	8931	False	NA	-2	True	AATAAA	-19	NA	44329345	44321457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44323781_44324213_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.14	chr9	-	3692	7	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-13	0	intron_retention	FALSE	canonical	3	40	junction_4	8.64902049688608	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCTGATTGAACCTG	8927	False	NA	-4	True	AATAAA	-17	NA	44329349	44321459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.15	chr9	-	3318	9	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	36	junction_4	9.98670991868693	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCTGATTGAACCTG	8946	False	NA	-4	True	AATAAA	-17	NA	44329330	44321459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.16	chr9	-	6887	6	NNC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_4	24.7418673507074	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACAGCTGATTGAAC	8944	False	NA	-7	True	AATAAA	-14	NA	44329332	44321462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44321662_44321744_44321878_44321987_44324831_44324903_44324971_44325264_44328507_44328929
ES.34873.17	chr9	-	1741	9	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	4	-3	intron_retention	FALSE	canonical	3	36	junction_4	9.98670991868693	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACAGCTGATTGAAC	8962	False	NA	-7	True	AATAAA	-14	NA	44329314	44321462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.2	chr9	-	1316	10	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	4	1	intron_retention	FALSE	canonical	3	36	junction_5	10.0995049383621	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGATTGAACCTGTAAAA	8962	False	NA	1	True	AATAAA	-22	NA	44329314	44321454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.3	chr9	-	3439	8	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	36	junction_3	10.6732547682016	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8942	False	NA	-1	True	AATAAA	-20	NA	44329334	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.4	chr9	-	2983	9	NIC	ENSMUSG00000043923.9	novel	1080	11	NA	NA	7	-1	intron_retention	FALSE	canonical	3	36	junction_4	10.7092249953019	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8965	False	NA	-1	True	AATAAA	-20	NA	44329311	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44323781_44324213_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.5	chr9	-	1305	10	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	36	junction_6	10.0860495270313	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8929	False	NA	-1	True	AATAAA	-20	NA	44329347	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929
ES.34873.6	chr9	-	1185	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	18.7179058657746	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8970	False	NA	-1	True	AATAAA	-20	NA	44329306	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324341_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.7	chr9	-	1800	10	NNC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_3	19.236025872254	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8936	False	NA	-1	True	AATAAA	-20	NA	44329340	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323608_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.8	chr9	-	1183	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	9.58331884056875	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTGATTGAACCTGTAA	8979	False	NA	-1	True	AATAAA	-20	NA	44329297	44321456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324739_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ES.34873.9	chr9	-	1142	11	NIC	ENSMUSG00000043923.9	novel	1725	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	19.2779666977615	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCTGATTGAACCTGTA	8979	False	NA	-2	True	AATAAA	-19	NA	44329297	44321457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324915_44324971_44328407_44328507_44328929_44329094_44329165
ES.34874.1	chr9	-	4292	1	Genic_Genomic	ENSMUSG00000111849.2	novel	NA	NA	NA	NA	-521	317	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCATTGTTGCTTACA	8972	False	NA	NA	False	ATTAAA	-12	NA	44335209	44330917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_44330900_44335200
ES.34875.1	chr9	+	206	1	Intergenic	novelGene_28323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGAGCACTTCTGCCTT	6723	False	NA	NA	False	AAGAAA	-7	NA	44343017	44343223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44343000_44343200
ES.34876.1	chr9	-	3221	3	NIC	ENSMUSG00000074397.6	novel	676	4	NA	NA	24	460	intron_retention	FALSE	canonical	3	31	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTGTGTGTGTGAGAT	9238	False	NA	NA	False	ATTAAA	-15	NA	44352409	44344609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44347400_44347500_44347576_44352053
ES.34876.2	chr9	-	2888	5	NNC	ENSMUSG00000074397.6	novel	1968	5	NA	NA	-118	458	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	15.8646619882051	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGTGTGTGTGTGAG	9096	False	NA	NA	False	ATTAAA	-13	NA	44352551	44344611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44346607_44346719_44346879_44347238_44347400_44347500_44347576_44352053
ES.34876.3	chr9	-	878	2	NNC	ENSMUSG00000074397.6	novel	1968	5	NA	NA	6224	458	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGTGTGTGTGTGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	44345890	44344611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44344678_44345078
ES.34876.4	chr9	-	1503	5	FSM	ENSMUSG00000074397.6	ENSMUST00000215375.3	790	5	-255	-458	-57	458	multi-exon	FALSE	canonical	0	0	junction_2	16.3611582719562	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTGTGTGTGTGTGAG	9278	False	NA	NA	False	ATTAAA	-13	NA	44352369	44344611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44345321_44346719_44346879_44347155_44347400_44347500_44347576_44352053
ES.34876.5	chr9	-	1799	5	FSM	ENSMUSG00000074397.6	ENSMUST00000098837.3	1968	5	154	15	33	-15	multi-exon	FALSE	canonical	0	0	junction_2	16.1322658049017	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAACCGA	9368	False	NA	NA	False	NA	NA	NA	44352279	44345511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44346607_44346719_44346879_44347155_44347400_44347500_44347576_44352053
ES.34876.6	chr9	-	885	3	ISM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	-228	225	-107	-225	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGACCTGGACCCTGGGG	9107	False	NA	-5	True	AATAAA	-17	NA	44352540	44347076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44347400_44347500_44347576_44352053
ES.34877.1	chr9	-	1076	5	FSM	ENSMUSG00000041523.4	ENSMUST00000047740.4	1083	5	-2	9	-2	-9	multi-exon	FALSE	canonical	3	6	junction_2	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTCATCTCCGACCAT	8951	False	NA	NA	False	AATAAA	-16	NA	44366275	44364020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44364407_44364779_44364851_44365091_44365231_44365358_44365491_44365927
ES.34877.2	chr9	-	801	5	NNC	ENSMUSG00000041523.4	novel	1083	5	NA	NA	239	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.76662979332984	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTCTCATCTCCGACC	9192	False	NA	NA	False	AATAAA	-14	NA	44366034	44364022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44364407_44364779_44364851_44365123_44365231_44365358_44365491_44365927
ES.34878.1	chr9	+	1375	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-85	-933	-85	933	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATACAAAGAAG	NA	False	NA	NA	False	AATAAA	-29	NA	44375454	44376829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44375500_44376800
ES.34878.2	chr9	+	493	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-85	-51	-85	51	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGCTTGTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	44375454	44375947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44375500_44375900
ES.34879.1	chr9	+	5765	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	-76	71	-76	-71	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCCGTATTTCTGTGT	1842	False	NA	-32	True	AATAGA	-25	NA	44394045	44421648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.10	chr9	+	2151	2	NNC	ENSMUSG00000063382.7	novel	5339	9	NA	NA	9486	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAAAATTCAAAAA	723	False	NA	-11	True	NA	NA	NA	44420054	44423178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44420340_44421312
ES.34879.2	chr9	+	5366	9	NIC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-75	-571	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.08872343937891	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGGGATGGATGGCCT	1843	False	NA	24	True	AAAAAG	-16	NA	44394046	44421148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44394784_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.3	chr9	+	5243	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	-75	592	-75	-592	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTTTGTTTTTCCTC	1843	False	NA	3	True	GGGGCT	-27	NA	44394046	44421127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.4	chr9	+	7475	10	NIC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-75	7	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	7.10416327250924	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTTGCATTTTTATT	1843	False	NA	11	True	ATTAAA	-20	NA	44394046	44423200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44394784_44400951_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.5	chr9	+	5406	10	NIC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-74	-587	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	7.10416327250924	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTTCCTCCAGTG	1844	False	NA	8	True	TTTAAA	-3	NA	44394047	44421132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44394784_44400951_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.6	chr9	+	7309	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	-66	-1483	-66	9	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGCATTTTTATTTC	1852	False	NA	13	True	ATTAAA	-22	NA	44394055	44423202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.7	chr9	+	4879	8	NNC	ENSMUSG00000063382.7	novel	5760	8	NA	NA	-20	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5.79232426648951	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATCTCTTGCATTTTT	1898	False	NA	8	True	ATTAAA	-17	NA	44394101	44423197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44416897_44419557_44419732_44419992
ES.34879.8	chr9	+	6705	9	NNC	ENSMUSG00000063382.7	novel	522	2	NA	NA	-62	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.62853679178143	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTTGCATTTTTATT	1811	False	NA	11	True	ATTAAA	-20	NA	44409541	44423200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44409566_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ES.34879.9	chr9	+	1932	2	ISM	ENSMUSG00000063382.7	ENSMUST00000074989.7	5339	9	9016	79	8880	-78	3prime_fragment	FALSE	canonical	3	13	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCGTGTGCCGTATT	117	False	NA	-39	True	AATAGA	-18	NA	44419448	44421641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44419732_44419992
ES.3488.1	chr10	-	2899	1	Antisense	novelGene_ENSMUSG00000060935.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGCTAATAATTTTCA	NA	False	NA	NA	False	AAAAAG	-10	NA	84950446	84947547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84947500_84950400
ES.34880.1	chr9	-	177	1	Intergenic	novelGene_28324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6792	False	NA	NA	False	NA	NA	NA	44426139	44425962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44426000_44426100
ES.34881.1	chr9	+	210	1	Intergenic	novelGene_28325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCAGGCCATGGTGG	NA	False	NA	NA	False	AAAAAG	-7	NA	44472558	44472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44472600_44472800
ES.34882.1	chr9	-	142	1	Intergenic	novelGene_28326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	5766	False	NA	NA	False	NA	NA	NA	44474000	44473858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44473900_44474000
ES.34883.1	chr9	+	160	1	Intergenic	novelGene_28327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAAATCTTTTT	1118	False	NA	NA	False	NA	NA	NA	44484321	44484481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44484300_44484500
ES.34884.1	chr9	+	178	1	Intergenic	novelGene_28328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGGACAAACCACAG	2546	False	NA	8	True	NA	NA	NA	44485749	44485927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44485700_44485900
ES.34885.1	chr9	-	181	1	Intergenic	novelGene_28329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9269	False	NA	NA	False	NA	NA	NA	44500916	44500735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44500700_44500900
ES.34886.1	chr9	-	181	1	Intergenic	novelGene_28330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAGAGAGAGAGA	2761	False	NA	NA	False	NA	NA	NA	44507424	44507243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44507200_44507400
ES.34887.1	chr9	+	170	1	Intergenic	novelGene_28331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTATTATATATATA	NA	False	NA	NA	False	NA	NA	NA	44513779	44513949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44513800_44513900
ES.34888.1	chr9	+	3843	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-1246	-2352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5280689913388	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTCATATTCCATCA	NA	False	NA	NA	False	NA	NA	NA	44514942	44549676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44515166_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.10	chr9	+	2244	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	22	3763	21	3552	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCCAAGGAATCAACAGAG	NA	False	NA	NA	False	NA	NA	NA	44516214	44548265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.2	chr9	+	3075	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-805	-3223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5280689913388	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATATATATTATTTT	NA	False	NA	NA	False	NA	NA	NA	44515383	44548805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44515710_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.3	chr9	+	4893	12	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-262	-3230	intron_retention	FALSE	canonical	2	8	junction_1	8.80364312267399	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACATACATATATATATA	NA	False	NA	NA	False	NA	NA	NA	44515926	44548798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.4	chr9	+	2936	15	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-243	-3223	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5742941778013	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATATATATTATTTT	NA	False	NA	NA	False	NA	NA	NA	44515945	44548805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.5	chr9	+	873	6	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-240	-9748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.4277510374971	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGGAACAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	44515948	44534965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518244_44518335_44518419_44518890_44524124_44524189_44525508_44525614_44534915
ES.34888.6	chr9	+	2829	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-218	-3215	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	8.71236623678017	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTATTTTTTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	44515970	44548813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.7	chr9	+	4280	13	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-217	-2386	intron_retention	FALSE	canonical	2	8	junction_1	8.95784882410702	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGCAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	44515971	44549642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979
ES.34888.8	chr9	+	4073	13	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-217	-3224	intron_retention	FALSE	canonical	2	8	junction_1	9.06573218223437	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATATATATATATTATTT	NA	False	NA	NA	False	NA	NA	NA	44515971	44548804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516043_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34888.9	chr9	+	2843	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	-58	-3223	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7.66070431047592	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATATATATATTATTTT	NA	False	NA	NA	False	NA	NA	NA	44516130	44548805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44516225_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ES.34889.1	chr9	-	2065	1	Intergenic	novelGene_28332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGGCCTCAGTTATTTAT	9899	False	NA	NA	False	NA	NA	NA	44516071	44514006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44514000_44516100
ES.3489.1	chr10	-	2171	1	Antisense	novelGene_ENSMUSG00000060935.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTAAATACGTCATTGAAA	NA	False	NA	NA	False	NA	NA	NA	84954000	84951829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_84951800_84954000
ES.34890.1	chr9	-	2712	14	Antisense	novelGene_ENSMUSG00000111030.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGCGGCTCCTTCCTCC	2546	False	NA	NA	False	NA	NA	NA	44548704	44516188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_44516249_44518418_44518890_44524124_44524188_44525507_44525612_44534913_44535044_44535769_44535917_44537682_44537778_44538932_44539056_44539932_44540066_44541319_44541435_44542676_44542741_44545386_44545490_44546977_44547163_44547785
ES.34890.2	chr9	-	178	1	Intergenic	novelGene_28333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTCA	3642	False	NA	NA	False	NA	NA	NA	44522867	44522689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44522700_44522900
ES.34890.3	chr9	-	193	1	Intergenic	novelGene_28334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	1892	False	NA	NA	False	NA	NA	NA	44524617	44524424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44524400_44524600
ES.34890.4	chr9	-	341	1	Antisense	novelGene_ENSMUSG00000111264.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTG	NA	False	NA	NA	False	NA	NA	NA	44529986	44529645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_44529600_44530000
ES.34890.5	chr9	-	4047	1	Antisense	novelGene_ENSMUSG00000032097.11_AS_novelGene_ENSMUSG00000111030.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTGTTGACAGCT	1369	False	NA	NA	False	NA	NA	NA	44549881	44545834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_44545800_44549900
ES.34891.1	chr9	+	1167	1	ISM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	34672	1	34667	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTTGTATGTATGTT	NA	False	NA	16	True	AATAAA	-17	NA	44550860	44552027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44550900_44552000
ES.34892.1	chr9	+	989	1	Intergenic	novelGene_28336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGTGTCTCCTCACAGCA	7595	False	NA	NA	False	NA	NA	NA	44648948	44649937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44648900_44649900
ES.34893.1	chr9	+	184	1	Antisense	novelGene_ENSMUSG00000032096.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCTGCCCCTTTCCCA	NA	False	NA	NA	False	NA	NA	NA	44660735	44660919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_44660700_44660900
ES.34894.1	chr9	+	156	1	Intergenic	novelGene_28337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	44665588	44665744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44665600_44665700
ES.34895.1	chr9	+	1768	14	NNC	ENSMUSG00000002031.14	novel	4169	12	NA	NA	-522	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.8551811074452	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTCTGGCTCATTAGT	5446	False	NA	7	True	AATACA	-16	NA	44678682	44702189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44678971_44684378_44684471_44684984_44685082_44685479_44685529_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701198_44701274_44701781
ES.34895.2	chr9	+	1587	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-212	-316	-19	1	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTCATTAGTGTCC	NA	False	NA	11	True	AATACA	-20	NA	44684237	44702193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ES.34895.3	chr9	+	1498	11	NIC	ENSMUSG00000002031.14	novel	4169	12	NA	NA	-18	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_10	56.451395022621	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTGGCTCATTAGTGT	NA	False	NA	9	True	AATACA	-18	NA	44684238	44702191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701781
ES.34895.5	chr9	+	1648	12	NNC	ENSMUSG00000002031.14	novel	4169	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	56.0877411806163	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCTGGCTCATTAGTGT	NA	False	NA	9	True	AATACA	-18	NA	44684262	44702191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701362_44701781
ES.34895.6	chr9	+	2595	2	ISM	ENSMUSG00000002031.14	ENSMUST00000128150.8	531	5	36	6033	-13	1689	5prime_fragment	FALSE	canonical	3	191	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44684292	44687401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44684471_44684984
ES.34895.7	chr9	+	4441	10	NIC	ENSMUSG00000002031.14	novel	4169	12	NA	NA	15	2	intron_retention	FALSE	canonical	3	173	junction_2	12.221212079469	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684320	44702190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695758_44697590_44697713_44698134_44700925_44701187_44701274_44701781
ES.34895.8	chr9	+	1369	12	NIC	ENSMUSG00000002031.14	novel	229	4	NA	NA	7	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	56.1612201134208	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTGGCTCATTAGTG	NA	False	NA	8	True	AATACA	-17	NA	44684566	44702190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44684585_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ES.34896.1	chr9	-	175	2	Intergenic	novelGene_28335	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	840	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAATAGATAGATACAA	NA	False	NA	NA	False	NA	NA	NA	44682630	44577213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44577242_44682483
ES.34896.10	chr9	-	5468	12	ISM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	2562	1	268	-1	intron_retention	FALSE	canonical	3	19	junction_8	6.08751601555753	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTGTGGAAGTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	44621975	44597605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181
ES.34896.11	chr9	-	4929	18	NNC	ENSMUSG00000048537.17	novel	5244	20	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.6424941656144	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTGTGGAAGTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	44632728	44597605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610892_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44632566
ES.34896.13	chr9	-	5372	21	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.916655913974	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTGTGGAAGTCTGA	2346	False	NA	-1	True	AATAAA	-17	NA	44646515	44597605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
ES.34896.16	chr9	-	3029	12	NIC	ENSMUSG00000048537.17	novel	3589	17	NA	NA	-83	0	intron_retention	FALSE	canonical	3	19	junction_7	6.48201580726396	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	44619807	44597606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
ES.34896.18	chr9	-	5463	22	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	12.2842376373573	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	2350	False	NA	-2	True	AATAAA	-16	NA	44646511	44597606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690_44619820_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
ES.34896.19	chr9	-	6844	8	NNC	ENSMUSG00000048537.17	novel	4643	18	NA	NA	-44	1555	intron_retention	FALSE	non_canonical	0	0	junction_7	12.2324426449187	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAGCCTTCCCCAGTCG	NA	False	NA	NA	False	NA	NA	NA	44619768	44604205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44605429_44605670_44605788_44607333_44607481_44609048_44609518_44610643_44615190_44615357_44615469_44619181_44619340_44619695
ES.34896.2	chr9	-	5115	19	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	12.2843119867437	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44632682	44597604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690_44619820_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44632566
ES.34896.20	chr9	-	1842	1	NIC	ENSMUSG00000048537.17	novel	5424	22	NA	NA	1681	1555	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAGCCTTCCCCAGTCG	NA	False	NA	NA	False	NA	NA	NA	44606047	44604205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44604200_44606000
ES.34896.21	chr9	-	4096	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	-2	-22	-2	22	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCCTTGTCAAACGTGG	NA	False	NA	NA	False	NA	NA	NA	44679144	44652838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.22	chr9	-	4755	9	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	0	-16	intron_retention	FALSE	canonical	3	910	junction_5	85.6296531582372	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	44679095	44652876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.23	chr9	-	2280	7	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	18	-16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	485.037942387558	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	44679124	44652876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44654149_44663534_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671261_44671523_44678966
ES.34896.24	chr9	-	3316	1	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	5599	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	763	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44656206	44652890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44652900_44656200
ES.34896.25	chr9	-	3759	9	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	19	-30	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	348.030507822231	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44679123	44652890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
ES.34896.26	chr9	-	3605	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	-5	472	-5	-472	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCCAAGTGTATTCATT	NA	False	NA	-13	True	ATTAAA	-35	NA	44679147	44653332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.29	chr9	-	3501	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	-3	574	-3	-574	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTGGACTCTAACTT	NA	False	NA	-15	True	AATAAA	-20	NA	44679145	44653434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.3	chr9	-	5350	21	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.5757703541374	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	2336	False	NA	0	True	AATAAA	-18	NA	44646525	44597604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316_44639398_44646421
ES.34896.31	chr9	-	3200	9	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	-15	-576	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	348.030507822231	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	-17	True	AATAAA	-18	NA	44679110	44653436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
ES.34896.32	chr9	-	3110	11	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	1	-576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	320.642495624021	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	-17	True	AATAAA	-18	NA	44679094	44653436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44654221_44654558_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.34	chr9	-	3629	10	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	189	-577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	329.37988874719	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTACTGGACTCTAA	NA	False	NA	-18	True	AATAAA	-17	NA	44678906	44653437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678596
ES.34896.36	chr9	-	3367	10	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	18	-579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	337.588324062326	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGTTTACTGGACTCT	NA	False	NA	-20	True	AATAAA	-15	NA	44679124	44653439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671366_44671523_44678966
ES.34896.37	chr9	-	3470	11	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	1	-579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	414.803375106809	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGTTTACTGGACTCT	NA	False	NA	-20	True	AATAAA	-15	NA	44679094	44653439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44674402_44674428_44678966
ES.34896.4	chr9	-	5956	11	NIC	ENSMUSG00000048537.17	novel	5461	22	NA	NA	-45	0	intron_retention	FALSE	canonical	0	0	junction_7	11.0276924150069	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619769	44597604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609518_44610643_44610994_44612242_44615190_44615357_44615469_44619181_44619338_44619690
ES.34896.40	chr9	-	5133	6	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	-4501	-583	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	432.91172310299	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGATGTTTACTGGA	5953	False	NA	-24	True	AATAAA	-11	NA	44666306	44653443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44665781_44665879
ES.34896.41	chr9	-	3464	10	NNC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	19	-583	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	335.659145158292	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGATGTTTACTGGA	NA	False	NA	-24	True	AATAAA	-11	NA	44679123	44653443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44655314_44656714_44656920_44661627_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.44	chr9	-	3246	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	47	779	0	-779	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGTTGTATTTCAGAG	NA	False	NA	NA	False	AGTAAA	-20	NA	44679095	44653639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.45	chr9	-	2353	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	48	1671	1	-1671	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTATGTGTACACACC	NA	False	NA	NA	False	ATTAAA	-19	NA	44679094	44654531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.46	chr9	-	2247	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	36	1789	-11	-1789	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCATCCATTGCTCCAT	NA	False	NA	NA	False	AATACA	-23	NA	44679106	44654649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.47	chr9	-	2140	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	-2	1934	-2	-1934	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCATCTGTCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	44679144	44654794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.48	chr9	-	5851	5	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	2894	-2011	intron_retention	FALSE	canonical	3	977	junction_2	75.4055700860354	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTTTCTCTATGGAT	3764	False	NA	57	True	AATATA	-23	NA	44668495	44654871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44655314_44656714_44661731_44662512_44662661_44663406_44663573_44668416
ES.34896.49	chr9	-	1982	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	22	2068	22	-2068	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAAGTCTTCCTTTATTT	NA	False	NA	0	True	AGTAAA	-17	NA	44679120	44654928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.5	chr9	-	3076	13	NIC	ENSMUSG00000048537.17	novel	3485	16	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	9.86963637740632	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619824	44597604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619579
ES.34896.50	chr9	-	1752	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	18	2302	18	-2302	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGAGTTTTCCAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	44679124	44655162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.51	chr9	-	2527	5	FSM	ENSMUSG00000032096.17	ENSMUST00000150160.8	2956	5	-31	460	16	459	multi-exon	FALSE	canonical	3	910	junction_1	87.5539119628586	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTCTCTACCT	NA	False	NA	NA	False	NA	NA	NA	44679126	44666864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ES.34896.52	chr9	-	177	1	Intergenic	novelGene_28338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	44682631	44682454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44682500_44682600
ES.34896.6	chr9	-	8036	16	NIC	ENSMUSG00000048537.17	novel	5600	23	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_15	13.0049563201454	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44632734	44597604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44632566
ES.34896.9	chr9	-	5016	18	NIC	ENSMUSG00000048537.17	novel	5244	20	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	12.6400801539222	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGTGTGGAAGTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	44632713	44597605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44632566
ES.34897.1	chr9	-	177	1	Intergenic	novelGene_28339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACTTAGA	NA	False	NA	NA	False	NA	NA	NA	44692594	44692417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44692400_44692600
ES.34898.1	chr9	-	2294	8	NIC	ENSMUSG00000002032.18	novel	2448	9	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.58034844053754	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGTTCATTTCTT	8232	False	NA	NA	False	AGTAAA	-19	NA	44710544	44705068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44706346_44706487_44706575_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710058_44710477
ES.34898.2	chr9	-	2409	9	NIC	ENSMUSG00000002032.18	novel	2448	9	NA	NA	-19	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	3.92905841137543	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTTTGTTCATTTCTT	8218	False	NA	NA	False	AGTAAA	-19	NA	44710558	44705068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710058_44710477
ES.34898.5	chr9	-	1951	7	NIC	ENSMUSG00000002032.18	novel	2448	9	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	5.5876848714134	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAAGAAGTGTTTGTT	8242	False	NA	NA	False	AGTAAA	-11	NA	44710534	44705076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44709417_44709730_44709960_44710055_44710477
ES.34899.1	chr9	+	7532	1	Genic_Genomic	ENSMUSG00000110773.2	novel	NA	NA	NA	NA	-6310	-3151	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCTCCTTGAAAGGAG	9679	False	NA	NA	False	TTTAAA	-43	NA	44782878	44790410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_44782900_44790400
ES.349.1	chr1	+	3792	22	NNC	ENSMUSG00000026077.16	novel	484	3	NA	NA	4	-107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.14574182188833	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATCTGAGATAC	NA	False	NA	NA	False	AATAAA	-22	NA	39232815	39402210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39232947_39233027_39233091_39302399_39302457_39326548_39326698_39331767_39331860_39339724_39339815_39350921_39351043_39352035_39352150_39363520_39363640_39364376_39364460_39365168_39365276_39367387_39367536_39370017_39370103_39372890_39373033_39373783_39373894_39375075_39375178_39377133_39377281_39384349_39384548_39386571_39386763_39387512_39387606_39398729_39398905_39400935
ES.349.2	chr1	+	3759	21	NNC	ENSMUSG00000026077.16	novel	484	3	NA	NA	4158	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.19804627858948	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCCTTGGTCCCTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	39237450	39402317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39237508_39302402_39302457_39326548_39326698_39331767_39331860_39339724_39339815_39350921_39351043_39352035_39352150_39363520_39363640_39364376_39364460_39365168_39365276_39367387_39367536_39370017_39370103_39372890_39373033_39373783_39373894_39375075_39375178_39377133_39377281_39384349_39384548_39386571_39386763_39387512_39387606_39398729_39398905_39400935
ES.349.3	chr1	+	3434	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	39249078	39252512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39249100_39252500
ES.349.4	chr1	+	174	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAGAGTCTGGGGA	NA	False	NA	NA	False	NA	NA	NA	39327333	39327507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39327300_39327500
ES.349.5	chr1	+	292	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAACTATTGG	8018	False	NA	NA	False	NA	NA	NA	39360462	39360754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39360500_39360800
ES.349.6	chr1	+	168	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAATGAGCAGGGCT	8018	False	NA	NA	False	NA	NA	NA	39360462	39360630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39360500_39360600
ES.3490.1	chr10	-	1522	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	35	10	3	-10	multi-exon	FALSE	canonical	3	41	junction_2	4.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGGAACTATTATTCC	NA	False	NA	-8	True	AATAAA	-13	NA	84963856	84955306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84956679_84962231_84962351_84963825
ES.34900.10	chr9	-	5288	10	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	1032	-1224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.65183535426478	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAATGAATGTATCTT	4848	False	NA	NA	False	NA	NA	NA	44730380	44715875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722203_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ES.34900.11	chr9	-	6540	10	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-255	-1260	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	4.45831169949753	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAAAAATACAACA	3561	False	NA	NA	False	NA	NA	NA	44731667	44715911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ES.34900.12	chr9	-	8157	12	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-3220	-2083	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	4.97929597731969	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCGTTCATCCTGAGAG	9185	False	NA	NA	False	ATTAAA	-13	NA	44734632	44716734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524
ES.34900.13	chr9	-	13269	36	NNC	ENSMUSG00000002028.14	novel	16461	36	NA	NA	4	-3188	intron_retention	FALSE	canonical	2	2	junction_21	5.53681555865935	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAGCACTTCATAGGG	9220	False	NA	NA	False	AATATA	-17	NA	44792590	44717839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524_44734686_44735621_44735701_44735817_44735936_44736686_44736846_44738118_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745203_44745318_44747098_44747220_44747440_44747537_44747847_44747995_44752267_44752382_44752859_44752992_44753606_44753681_44753829_44754214_44754654_44754720_44756685_44756921_44758149_44758328_44758700_44761352_44764234_44764305_44792146
ES.34900.14	chr9	-	1508	1	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	10402	-4851	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGGTTCCTTTTCCTTC	5077	False	NA	NA	False	AATAAA	-14	NA	44721010	44719502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44719500_44721000
ES.34900.15	chr9	-	4255	5	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	60096	8688	-1086	2637	internal_fragment	FALSE	canonical	3	9	junction_4	3.63145976158349	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGCCTTTTAAATAT	2730	False	NA	NA	False	NA	NA	NA	44732498	44723339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ES.34900.16	chr9	-	3629	4	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	56902	15951	-4280	3429	internal_fragment	FALSE	canonical	3	8	junction_1	1.69967317119759	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCCCTTCTGATGTGG	8125	False	NA	NA	False	AATAAA	-30	NA	44735692	44730602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44733817_44733983_44734167_44734524_44734686_44735621
ES.34900.17	chr9	-	4052	6	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	-108	39706	-108	-1498	5prime_fragment	FALSE	canonical	2	5	junction_1	1.01980390271856	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACACGGCCTCAGCTTT	9108	False	NA	NA	False	AATAAA	-19	NA	44792702	44754357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44754720_44756685_44756921_44758149_44758328_44758700_44761352_44764234_44764305_44792146
ES.34900.18	chr9	-	177	1	Intergenic	novelGene_28340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGGAAGGAAGGAA	2079	False	NA	NA	False	NA	NA	NA	44765765	44765588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44765600_44765800
ES.34900.2	chr9	-	9292	7	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-255	-3	intron_retention	FALSE	canonical	3	12	junction_5	3.20156211871642	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCTGCTGAGCTTCCTT	3561	False	NA	NA	False	AATAAA	-19	NA	44731667	44714654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44719475_44720360_44720491_44721011_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002
ES.34900.3	chr9	-	10651	5	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-52	-8	intron_retention	FALSE	canonical	3	12	junction_4	3.39116499156263	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCACTCTGCTGAGCT	3764	False	NA	NA	False	AATAAA	-14	NA	44731464	44714659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44719475_44720360_44722378_44724283_44724359_44725871_44726043_44727891
ES.34900.4	chr9	-	14202	34	NNC	ENSMUSG00000002028.14	novel	16461	36	NA	NA	-137	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_21	5.68018158247757	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCACTCTGCTGAGCT	8226	False	NA	NA	False	AATAAA	-14	NA	44759618	44714659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524_44734686_44735621_44735701_44735817_44735936_44736686_44736846_44738118_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745203_44745318_44747098_44747220_44747440_44747537_44747847_44747995_44752267_44752382_44752859_44752992_44753606_44753681_44753829_44754214_44754654_44754720_44756685_44756921_44758149_44758328_44758700
ES.34900.5	chr9	-	6959	10	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	576	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.65183535426478	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGCACTCTGCTGAGC	4392	False	NA	NA	False	AATAAA	-13	NA	44730836	44714660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722203_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ES.34900.6	chr9	-	7153	1	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	9599	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGCACTCTGCTGAGC	4274	False	NA	NA	False	AATAAA	-13	NA	44721813	44714660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44714700_44721800
ES.34900.7	chr9	-	5656	3	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	9372	-10	intron_retention	FALSE	canonical	3	21	junction_1	1	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGCACTCTGCTGAG	4047	False	NA	NA	False	AATAAA	-12	NA	44722040	44714661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44719475_44720360_44721096_44721932
ES.34900.8	chr9	-	7016	8	NIC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	1430	-98	intron_retention	FALSE	canonical	3	9	junction_7	3.95897327444315	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAAAGGAGTTTTT	5246	False	NA	NA	False	AGTAAA	-19	NA	44729982	44714749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44719475_44720360_44720491_44721011_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
ES.34900.9	chr9	-	3775	1	ISM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	73197	971	12015	-971	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTTTGTGCCGAATCA	6690	False	NA	NA	False	AATACA	-14	NA	44719397	44715622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44715600_44719400
ES.34901.1	chr9	+	509	1	FSM	ENSMUSG00000110773.2	ENSMUST00000217585.2	536	1	-243	270	-243	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCACGCTTGGAGCTCT	NA	False	NA	NA	False	AATAAA	-26	NA	44792782	44793291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44792800_44793300
ES.34902.1	chr9	-	2057	2	Intergenic	novelGene_28341	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATCTTCAGAAACTCCA	NA	False	NA	NA	False	NA	NA	NA	44818860	44816101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44816479_44817180
ES.34903.1	chr9	+	1406	1	Antisense	novelGene_ENSMUSG00000038717.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAACCACACACACAC	NA	False	NA	NA	False	NA	NA	NA	44826913	44828319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_44826900_44828300
ES.34903.2	chr9	+	177	1	Antisense	novelGene_ENSMUSG00000038717.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTATAGATATAT	NA	False	NA	NA	False	NA	NA	NA	44827869	44828046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_44827900_44828000
ES.34904.1	chr9	+	174	1	Intergenic	novelGene_28342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATCCACCTTCAA	NA	False	NA	NA	False	NA	NA	NA	44830968	44831142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44831000_44831100
ES.34905.1	chr9	-	529	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	0	15	0	-15	multi-exon	FALSE	canonical	3	4613	junction_2	56	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGAGTAAGTTGA	NA	False	NA	9	True	AAAACA	-38	NA	44832040	44824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44824765_44825948_44826110_44831907
ES.34905.2	chr9	-	5126	2	NNC	ENSMUSG00000038717.10	novel	608	2	NA	NA	-17	20	intron_retention	TRUE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGCAGTCATAGTAT	NA	False	NA	-9	True	AATAAA	-39	NA	44832022	44824547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44827958_44830306
ES.34905.3	chr9	-	708	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	3	20	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	2301	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGCAGTCATAGTAT	NA	False	NA	-9	True	AATAAA	-39	NA	44832002	44824547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44824765_44825713_44826110_44831907
ES.34905.4	chr9	-	498	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	1	20	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2305.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGCAGTCATAGTAT	NA	False	NA	-9	True	AATAAA	-39	NA	44832004	44824547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44824765_44825925_44826110_44831907
ES.34905.5	chr9	-	4700	2	NNC	ENSMUSG00000038717.10	novel	608	2	NA	NA	-6	20	intron_retention	TRUE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGCAGTCATAGTAT	NA	False	NA	-9	True	AATAAA	-39	NA	44832011	44824547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44827531_44830294
ES.34905.6	chr9	-	1655	2	NIC	ENSMUSG00000038717.10	novel	544	3	NA	NA	3	18	intron_retention	FALSE	canonical	3	4613	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTACTGCAGTCATAGT	NA	False	NA	-11	True	AATAAA	-37	NA	44832002	44824549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44826110_44831907
ES.34905.7	chr9	-	2514	1	FSM	ENSMUSG00000038717.10	ENSMUST00000216815.3	6310	1	-1838	5634	3	-4897	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAGAGCAAGAAC	NA	False	NA	NA	False	NA	NA	NA	44832002	44829488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44829500_44832000
ES.34906.1	chr9	+	172	1	Intergenic	novelGene_28343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44832942	44833114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_44832900_44833100
ES.34907.1	chr9	+	266	1	Antisense	novelGene_ENSMUSG00000059890.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAACCTAACCCAAACCAA	NA	False	NA	NA	False	NA	NA	NA	44836721	44836987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_44836700_44837000
ES.34908.1	chr9	+	2845	1	FSM	ENSMUSG00000111241.2	ENSMUST00000215720.2	1022	1	-248	-1575	-248	1575	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTCTGATAAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	44866764	44869609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44866800_44869600
ES.34909.1	chr9	-	6202	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTTAGTTCTTCATT	5329	False	NA	-1	True	AATAAA	-18	NA	44876869	44834425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.10	chr9	-	3834	21	NNC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	-2	391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.679923469201	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGTCCTGCCATTT	5344	False	NA	NA	False	NA	NA	NA	44876854	44836754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849021_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.12	chr9	-	3694	21	NNC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	8	387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.2581125962551	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAAAAATGTCCTGCC	5330	False	NA	NA	False	NA	NA	NA	44876868	44836758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44837274_44840959_44841118_44843639_44843718_44844699_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.13	chr9	-	3840	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	0	387	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	15.6028042351367	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAAAAATGTCCTGCC	5346	False	NA	NA	False	NA	NA	NA	44876852	44836758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871426_44874634_44874731_44876782
ES.34909.14	chr9	-	3811	12	ISM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	17745	-387	17670	387	3prime_fragment	FALSE	canonical	3	34	junction_3	7.60925925739694	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAACAAAAATGTCCTGCC	6250	False	NA	NA	False	NA	NA	NA	44859153	44836758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481
ES.34909.15	chr9	-	3668	20	NNC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	-2	330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	17.7416048579684	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCGGTTTTCCTATTCT	5373	False	NA	NA	False	TATAAA	-15	NA	44876825	44836815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864467_44871276_44871438_44876782
ES.34909.16	chr9	-	5667	21	NNC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	43	329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.50310311623	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCGGTTTTCCTATTC	5418	False	NA	NA	False	TATAAA	-14	NA	44876780	44836816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44874837
ES.34909.17	chr9	-	3632	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	-1	239	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	13.0877805605076	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAATTATGATTCTTAA	5361	False	NA	NA	False	NA	NA	NA	44876837	44836906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
ES.34909.18	chr9	-	3695	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	2	237	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATAATTATGATTCTT	5353	False	NA	NA	False	NA	NA	NA	44876845	44836908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.19	chr9	-	3613	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	1	234	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	17.0542516693052	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGATAATTATGATT	5363	False	NA	NA	False	NA	NA	NA	44876835	44836911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871426_44874634_44874731_44876782
ES.34909.2	chr9	-	6095	20	FSM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	38	-2718	-2	-3	multi-exon	FALSE	canonical	2	4	junction_19	14.0720347023741	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTTGTTAGTTCTTCA	5338	False	NA	-3	True	AATAAA	-16	NA	44876860	44834427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ES.34909.20	chr9	-	3453	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	-6	11	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGCACGCCCGGGCGT	5369	False	NA	NA	False	AATAAA	-12	NA	44876829	44837134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.21	chr9	-	5403	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	0	2050	intron_retention	FALSE	canonical	3	40	junction_8	10.0238469985589	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTAGTGGCTCACACC	5351	False	NA	NA	False	AATACA	-36	NA	44876847	44842218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.22	chr9	-	7719	16	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	16	846	intron_retention	FALSE	canonical	3	40	junction_8	8.91291198206288	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACGCCACAGAGTCACTT	5391	False	NA	NA	False	AAGAAA	-7	NA	44876807	44843422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634
ES.34909.23	chr9	-	3269	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	0	-84	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	10.0238469985589	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATGGCTATGGAATA	5351	False	NA	NA	False	GATAAA	-31	NA	44876847	44844352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.24	chr9	-	3218	18	NIC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	9	-98	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	13.1741069308551	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTGTGAAAATATTTT	5331	False	NA	NA	False	GATAAA	-17	NA	44876867	44844366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
ES.34909.26	chr9	-	3179	17	ISM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	30	7222	8	-99	5prime_fragment	FALSE	canonical	2	4	junction_16	14.6989317213871	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTTGTGAAAATATTT	5330	False	NA	NA	False	GATAAA	-16	NA	44876868	44844367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ES.34909.27	chr9	-	3247	18	NNC	ENSMUSG00000059890.17	novel	3486	19	NA	NA	0	-99	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.1350271256673	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTTGTGAAAATATTT	5351	False	NA	NA	False	GATAAA	-16	NA	44876847	44844367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863294_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.29	chr9	-	178	1	Intergenic	novelGene_28344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	44850212	44850034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_44850000_44850200
ES.34909.3	chr9	-	4663	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	1	1204	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTAAGTGATTCTGCC	5352	False	NA	NA	False	AATAAA	-16	NA	44876846	44835941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.30	chr9	-	2536	12	ISM	ENSMUSG00000059890.17	ENSMUST00000117506.9	6039	20	39	18970	-1	3958	5prime_fragment	FALSE	canonical	3	18	junction_9	15.8458483234855	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTCTCATATTGCTAT	5361	False	NA	NA	False	ATTAAA	-16	NA	44876837	44853394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
ES.34909.31	chr9	-	2416	8	ISM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	20	21071	-2	-864	5prime_fragment	FALSE	canonical	2	4	junction_7	21.1080795054444	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATTGACTATAGCCAT	5320	False	NA	NA	False	AATAAA	-21	NA	44876878	44858216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ES.34909.32	chr9	-	2469	9	FSM	ENSMUSG00000059890.17	ENSMUST00000138559.9	3374	9	29	876	0	-876	multi-exon	FALSE	canonical	3	42	junction_4	11.548132965982	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTAAAAACACTTATT	5351	False	NA	NA	False	AATAAA	-9	NA	44876847	44858228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.33	chr9	-	2462	9	NIC	ENSMUSG00000059890.17	novel	3374	9	NA	NA	0	-876	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	22.781571499789	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTAAAAACACTTATT	5346	False	NA	NA	False	AATAAA	-9	NA	44876852	44858228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871426_44874634_44874731_44876782
ES.34909.34	chr9	-	5331	4	NNC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	1	-1471	intron_retention	TRUE	non_canonical	0	0	junction_1	35.8267435801184	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATTTTTGTTTGTTTGT	5352	False	NA	NA	False	AATAAA	-18	NA	44876846	44869063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44869429_44869616_44870361_44870572_44874731_44876782
ES.34909.36	chr9	-	1711	1	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	4972	-2548	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGGAAAAATAATTT	9449	False	NA	NA	False	AAAACA	-18	NA	44871851	44870140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44870100_44871900
ES.34909.4	chr9	-	4540	20	FSM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	57	-1182	0	1182	multi-exon	FALSE	canonical	2	4	junction_19	14.0720347023741	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATACTTCTCTCTGG	5357	False	NA	NA	False	ATTAAA	-13	NA	44876841	44835963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ES.34909.5	chr9	-	3886	21	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	1	398	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5323	False	NA	NA	False	NA	NA	NA	44876875	44836747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.6	chr9	-	6195	19	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	8	398	intron_retention	FALSE	canonical	3	40	junction_10	10.3279555898864	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5330	False	NA	NA	False	NA	NA	NA	44876868	44836747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.7	chr9	-	3817	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	-5	398	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	13.0877805605076	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5335	False	NA	NA	False	NA	NA	NA	44876863	44836747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
ES.34909.8	chr9	-	4689	20	NIC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	6	398	intron_retention	FALSE	canonical	3	40	junction_10	10.1318181789938	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5328	False	NA	NA	False	NA	NA	NA	44876870	44836747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_44837274_44840959_44841118_44843639_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.34909.9	chr9	-	3877	21	NNC	ENSMUSG00000059890.17	novel	3415	20	NA	NA	-1	398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.2581125962551	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5345	False	NA	NA	False	NA	NA	NA	44876853	44836747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844582_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
ES.3491.1	chr10	-	3261	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	-235	0	-235	0	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85021163	84967563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.12	chr10	-	3743	12	NIC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_9	74.9087599286598	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTCGTGTACTTGTGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	85020920	84967566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987091_84987220_84992949_84993059_85020177
ES.3491.14	chr10	-	2892	13	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.3406719812865	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAATCTCGTGTACTTG	NA	False	NA	-12	True	ATTAAA	-12	NA	85020927	84967570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982394_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.15	chr10	-	2883	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	4	139	4	-139	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGCCTCTGTCAGCGAG	NA	False	NA	NA	False	AATACA	-13	NA	85020924	84967702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.16	chr10	-	3344	10	ISM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	11	10199	11	1825	5prime_fragment	FALSE	canonical	3	194	junction_9	29.4635158362355	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAATGAGAAATTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	85020917	84977762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.2	chr10	-	3065	12	NIC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	41	0	intron_retention	FALSE	canonical	3	194	junction_11	28.5246015320457	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85020887	84967563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.3	chr10	-	3288	14	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	92.4598745530561	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85020927	84967563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84990173_84990437_84992949_84993059_85020177
ES.3491.4	chr10	-	4057	16	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	50	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	112.565635174427	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGTGTACTTGTGTTCA	NA	False	NA	-6	True	ATTAAA	-18	NA	85020878	84967564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85003808_85003853_85014454_85014524_85015008_85015978_85020177
ES.3491.5	chr10	-	3075	13	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	72.2136105976952	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTGTACTTGTGTTC	NA	False	NA	-7	True	ATTAAA	-17	NA	85020945	84967565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84968206_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.3491.6	chr10	-	3008	13	NIC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	72.5937612103593	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTGTACTTGTGTTC	NA	False	NA	-7	True	ATTAAA	-17	NA	85020927	84967565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987091_84987220_84992949_84993059_85020177
ES.3491.7	chr10	-	2998	13	NNC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	73.0028062626515	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTGTACTTGTGTTC	NA	False	NA	-7	True	ATTAAA	-17	NA	85020896	84967565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992943_84993059_85020177
ES.3491.8	chr10	-	3763	12	NIC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	3	-3	intron_retention	FALSE	canonical	3	194	junction_11	28.1756591510304	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTCGTGTACTTGTGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	85020925	84967566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ES.34910.1	chr9	-	989	7	FSM	ENSMUSG00000002033.15	ENSMUST00000002101.12	1023	7	32	2	32	-2	multi-exon	FALSE	canonical	2	5	junction_5	2.73353657780945	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCTCTATCCAAATAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	44891697	44880871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_44881216_44881988_44882072_44882560_44882605_44884803_44884936_44885460_44885689_44886544_44886569_44891563
ES.34911.1	chr9	+	372	4	NNC	ENSMUSG00000032094.9	novel	299	2	NA	NA	-359	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.05480466765633	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGCGCCTGTGTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	44896761	44897717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44896811_44896901_44897034_44897354_44897399_44897570
ES.34912.1	chr9	-	1681	7	NNC	ENSMUSG00000032093.8	novel	1462	8	NA	NA	-212	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.64279609239471	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTATGTCTCTTTTCTT	4525	False	NA	NA	False	AATAAA	-15	NA	44921137	44910039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44910886_44911732_44911780_44912276_44912445_44913435_44913652_44918463_44918492_44920645_44920748_44920863
ES.34912.2	chr9	-	1485	6	NNC	ENSMUSG00000032093.8	novel	1462	8	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5.01996015920445	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGCTATGTCTCTTTTC	4733	False	NA	NA	False	AATAAA	-13	NA	44920929	44910041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_44910886_44911732_44911780_44912276_44912445_44913435_44913652_44920603_44920748_44920863
ES.34913.1	chr9	+	3333	7	NIC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	25	31	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	200.623541877706	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAAAATTCACAACAGC	NA	False	NA	46	True	AATAAA	-35	NA	44951499	44965344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44951881_44953908_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.10	chr9	+	3767	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	123	-783	123	783	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACGACGCTTGCACGT	NA	False	NA	NA	False	AATAAA	-44	NA	44953845	44966096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.11	chr9	+	2904	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	129	11	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	211.37171050072	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTTGCTTACAAACAAA	NA	False	NA	26	True	AATAAA	-29	NA	44953851	44965324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963260
ES.34913.12	chr9	+	2965	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-135	-3	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_5	202.631290772181	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATGATTTTTATTATT	NA	False	NA	12	True	AATAAA	-15	NA	44953858	44965310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963178
ES.34913.13	chr9	+	3759	5	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-112	-9	intron_retention	FALSE	canonical	3	22	junction_4	230.015624469296	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTATGATTTTT	NA	False	NA	6	True	AATAAA	-9	NA	44953881	44965304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963260
ES.34913.14	chr9	+	2873	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-110	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	206.778528866031	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTATGATTTTT	NA	False	NA	6	True	AATAAA	-9	NA	44953883	44965304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954093_44954997_44955165_44955450_44955598_44958461_44958610_44960949_44961023_44963175
ES.34913.15	chr9	+	2965	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-108	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	206.778528866031	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAAAATTCACAACAGC	NA	False	NA	46	True	AATAAA	-35	NA	44953885	44965344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954093_44954997_44955165_44955450_44955652_44958461_44958610_44960949_44961023_44963175
ES.34913.16	chr9	+	2718	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	175	214	-96	-214	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATGGCCTGTGTATA	NA	False	NA	NA	False	AATATA	-19	NA	44953897	44965099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.17	chr9	+	2411	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	182	514	-89	-514	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATACATCTTGTTCCACT	NA	False	NA	NA	False	TATAAA	-20	NA	44953904	44964799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.18	chr9	+	2770	7	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	248.783038007015	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTATGATTTTTATTAT	NA	False	NA	11	True	AATAAA	-14	NA	44953956	44965309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963178_44963894_44963989
ES.34913.19	chr9	+	3003	6	NNC	ENSMUSG00000032092.6	novel	1175	6	NA	NA	560	-9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	209.62404442239	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTATGATTTTT	NA	False	NA	6	True	AATAAA	-9	NA	44954553	44965304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44954829_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.2	chr9	+	3114	6	NIC	ENSMUSG00000032092.6	novel	1175	6	NA	NA	26	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	214.268989823539	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATGATTTTTATTATT	NA	False	NA	12	True	AATAAA	-15	NA	44951500	44965310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44951881_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.3	chr9	+	4375	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	-1244	-24	1004	24	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATCTGCAAAATTCA	NA	False	NA	39	True	AATAAA	-42	NA	44952478	44965337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.4	chr9	+	3068	7	NIC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-355	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	200.984797656163	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTATGATTTTT	NA	False	NA	6	True	AATAAA	-9	NA	44953367	44965304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44953524_44953908_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.5	chr9	+	3011	7	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	200.623541877706	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953638	44965313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44953729_44953908_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.6	chr9	+	2921	7	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-82	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	253.461864324136	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATGATTTTTATTATT	NA	False	NA	12	True	AATAAA	-15	NA	44953640	44965310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44953729_44953908_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963260
ES.34913.7	chr9	+	2849	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.268989823539	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953642	44965313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44953755_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34913.9	chr9	+	2812	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	122	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.268989823539	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTTGCTTACAAACAAA	NA	False	NA	26	True	AATAAA	-29	NA	44953844	44965324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_44953909_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ES.34914.1	chr9	+	3425	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	-1	0	-1	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	27	True	AATAAA	-20	NA	44966482	44988734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
ES.34914.2	chr9	+	547	1	NIC	ENSMUSG00000070305.11	novel	3424	6	NA	NA	2	-9433	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44966487	44967034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44966500_44967000
ES.34914.3	chr9	+	200	1	ISM	ENSMUSG00000070305.11	ENSMUST00000093856.4	3260	2	8099	1683	4038	-1683	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44974584	44974784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_44974600_44974800
ES.34914.4	chr9	+	4249	1	NIC	ENSMUSG00000070305.11	novel	3424	6	NA	NA	2577	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTACCCTTTTCGTGT	818	False	NA	21	True	AATAAA	-14	NA	44984479	44988728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_44984500_44988700
ES.34915.1	chr9	+	1835	7	NNC	ENSMUSG00000048534.8	novel	477	3	NA	NA	5382	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.4142135623731	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTTTGGTTTTTTAAA	884	False	NA	NA	False	AATAAA	-20	NA	45003168	45019828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45003211_45005042_45005156_45009020_45009253_45012292_45012444_45014332_45014394_45015487_45015572_45018676
ES.34916.1	chr9	+	623	1	Intergenic	novelGene_28345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGTGATACGCTTGGC	NA	False	NA	NA	False	AATAAA	-15	NA	45027190	45027813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45027200_45027800
ES.34917.1	chr9	-	232	1	Intergenic	novelGene_28346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAACTCTTCAGATG	1287	False	NA	NA	False	ATTAAA	-38	NA	45202807	45202575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45202600_45202800
ES.34918.1	chr9	+	506	1	Intergenic	novelGene_28347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCAGAGGATGGAGGA	NA	False	NA	NA	False	AATAAA	-12	NA	45211959	45212465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45212000_45212500
ES.34919.1	chr9	+	2041	3	ISM	ENSMUSG00000037129.8	ENSMUST00000034597.8	3245	13	25656	3	25656	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTGTTGGGTGCTT	9668	False	NA	NA	False	AATAAA	-13	NA	45256053	45258876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45256355_45256523_45256677_45257289
ES.34919.2	chr9	+	1784	3	NNC	ENSMUSG00000037129.8	novel	3245	13	NA	NA	25991	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTTGTTGGGTGCTT	10003	False	NA	NA	False	AATAAA	-13	NA	45256388	45258876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45256433_45256523_45256677_45257289
ES.34919.4	chr9	+	1785	4	NNC	ENSMUSG00000037129.8	novel	3245	13	NA	NA	26020	7482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.08248290463863	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCTTTTCGTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	45256417	45266361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45256433_45256523_45256677_45257289_45258870_45266324
ES.34919.5	chr9	+	1740	2	ISM	ENSMUSG00000037129.8	ENSMUST00000034597.8	3245	13	26124	5	26124	-5	3prime_fragment	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAAGTTGTTGGGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	45256521	45258874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45256677_45257289
ES.3492.1	chr10	-	3082	2	Intergenic	novelGene_2679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAGCAAAAAGCCCAAA	NA	False	NA	NA	False	NA	NA	NA	85034322	85021708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_85024670_85034201
ES.3492.2	chr10	-	590	2	Intergenic	novelGene_2680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCACTGTTTAAAAATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	85034303	85024181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_85024670_85034201
ES.34920.1	chr9	+	1627	8	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	-1710	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	396.485787376845	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	4873	False	NA	17	True	AATAAA	-21	NA	45279772	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45279917_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.10	chr9	+	1891	9	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	454.837866030303	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	630	False	NA	17	True	AATAAA	-21	NA	45281744	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281787_45287685_45288052_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.11	chr9	+	1156	4	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	429.920922961421	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGACTCTGAGTGGCT	641	False	NA	14	True	AATAAA	-18	NA	45281755	45307449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281787_45301285_45301346_45301939_45301971_45306415
ES.34920.12	chr9	+	1712	7	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	390.015384311953	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	644	False	NA	17	True	AATAAA	-21	NA	45281758	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281787_45301670_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.13	chr9	+	6972	7	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	12265	0	intron_retention	FALSE	non_canonical	0	0	junction_1	390.015384311953	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	761	False	NA	18	True	AATAAA	-22	NA	45294004	45307453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45295153_45297531_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.14	chr9	+	1592	8	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	15531	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	362.730405313334	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	4027	False	NA	17	True	AATAAA	-21	NA	45297270	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45297383_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.15	chr9	+	4797	7	ISM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	16486	4	16229	-4	3prime_fragment	FALSE	canonical	3	400	junction_1	242.076204714319	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGACTCTGAGTGGCT	4725	False	NA	14	True	AATAAA	-18	NA	45297968	45307449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.16	chr9	+	5158	5	NIC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	16557	-5	intron_retention	FALSE	canonical	3	999	junction_3	44.5105324614298	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGACTCTGAGTGGC	5053	False	NA	13	True	AATAAA	-17	NA	45298296	45307448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.17	chr9	+	3263	7	ISM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	18020	5	17763	-1	3prime_fragment	FALSE	canonical	3	728	junction_1	122.825983497883	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	82	False	NA	17	True	AATAAA	-21	NA	45299502	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.18	chr9	+	1368	4	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	21050	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	511.542981793536	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	3369	False	NA	17	True	AATAAA	-21	NA	45302789	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45302896_45303512_45303553_45303973_45304024_45306280
ES.34920.19	chr9	+	1355	4	ISM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	21330	1	21073	-1	3prime_fragment	FALSE	canonical	3	999	junction_2	48.787521173167	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	3392	False	NA	17	True	AATAAA	-21	NA	45302812	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.2	chr9	+	2388	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	-600	1	-600	-1	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGAGTGGCTTTTCTTC	5983	False	NA	21	True	AATAAA	-25	NA	45280882	45307456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.4	chr9	+	1482	7	NIC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	378.33997791522	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	595	False	NA	17	True	AATAAA	-21	NA	45281709	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45281787_45301285_45301346_45301934_45301971_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.5	chr9	+	1621	9	NNC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	438.881532990396	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	595	False	NA	17	True	AATAAA	-21	NA	45281709	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281787_45287685_45287750_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.6	chr9	+	1565	8	NNC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	363.395045623456	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTCTGAGTGGCTTTT	603	False	NA	17	True	AATAAA	-21	NA	45281717	45307452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281803_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.7	chr9	+	1492	7	NIC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	390.015384311953	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGAGTGGCTTTTCTTC	604	False	NA	21	True	AATAAA	-25	NA	45281718	45307456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45281787_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34920.8	chr9	+	1643	9	NNC	ENSMUSG00000066705.8	novel	1788	8	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	455.221082964091	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTGACTCTGAGTGGC	606	False	NA	13	True	AATAAA	-17	NA	45281720	45307448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45281787_45294654_45294753_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ES.34921.1	chr9	+	671	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	-40	1	-40	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGAGTGCTTATCATT	NA	False	NA	33	True	AATGAA	-45	NA	45314395	45321575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ES.34921.2	chr9	+	627	6	NNC	ENSMUSG00000059412.8	novel	632	6	NA	NA	-33	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.0461946325053	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGAAATCGGGCTCGCT	NA	False	NA	7	True	AATGAA	-19	NA	45314402	45321549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45314588_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ES.34921.3	chr9	+	754	7	NNC	ENSMUSG00000059412.8	novel	711	6	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.806410858642	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGGGCTCGCTGTGGTC	NA	False	NA	13	True	AATGAA	-25	NA	45317286	45321555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45317465_45319403_45319443_45319597_45319673_45320343_45320472_45320810_45320848_45321000_45321032_45321289
ES.34921.4	chr9	+	1190	5	ISM	ENSMUSG00000059412.8	ENSMUST00000217549.2	258	6	212	-264	212	0	3prime_fragment	FALSE	canonical	3	206	junction_4	7.3143694191639	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGAGTGCTTATCATT	NA	False	NA	33	True	AATGAA	-45	NA	45318681	45321575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ES.34921.5	chr9	+	444	4	ISM	ENSMUSG00000059412.8	ENSMUST00000217549.2	258	6	1113	-264	1113	0	3prime_fragment	FALSE	canonical	3	206	junction_3	6.54896090146283	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGAGTGCTTATCATT	503	False	NA	33	True	AATGAA	-45	NA	45319582	45321575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45319673_45320810_45320848_45321000_45321032_45321289
ES.34922.1	chr9	-	2012	1	Genic_Genomic	ENSMUSG00000097074.3	novel	NA	NA	NA	NA	-2	1288	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAAAATTTGAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	45342532	45340520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_45340500_45342500
ES.34923.1	chr9	-	3040	1	Intergenic	novelGene_28348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTTAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	45468247	45465207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45465200_45468200
ES.34924.1	chr9	+	3698	27	Antisense	novelGene_ENSMUSG00000110997.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGAGGCCCGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	45682828	45739969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45682936_45683574_45683690_45685117_45685324_45685739_45685808_45686081_45686208_45686491_45686664_45686972_45687043_45687161_45687246_45688079_45688224_45689704_45689831_45690096_45690223_45690436_45690518_45690678_45690909_45690987_45691135_45696180_45696331_45697077_45697219_45698722_45698809_45702379_45702468_45704232_45704310_45705348_45705727_45712761_45712843_45713942_45714076_45714470_45714630_45721004_45721207_45729275_45729388_45734943_45735062_45739798
ES.34925.1	chr9	+	137	1	Intergenic	novelGene_28349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAACAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45741647	45741784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45741600_45741800
ES.34926.1	chr9	-	1557	1	Genic_Genomic	ENSMUSG00000043987.19	novel	NA	NA	NA	NA	1285	1010	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAATGGGGCTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	45678790	45677233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_45677200_45678800
ES.34926.11	chr9	-	9346	26	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	3691	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	22.221647103669	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTCCTGTGAGTGTGC	NA	False	NA	36	True	ATTAAA	-24	NA	45710274	45678244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705827_45706016
ES.34926.14	chr9	-	5803	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-20	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_19	20.1793348640523	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCAGTCCTGTGAGTGT	NA	False	NA	34	True	ATTAAA	-22	NA	45739957	45678246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.15	chr9	-	5958	32	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-4886	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1581901061079	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCAGTCCTGTGAGTG	NA	False	NA	33	True	ATTAAA	-21	NA	45744875	45678247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679658_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697244_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45744728
ES.34926.16	chr9	-	5640	30	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_19	19.565068729438	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCAGTCCTGTGAGTG	NA	False	NA	33	True	ATTAAA	-21	NA	45739939	45678247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.17	chr9	-	5575	30	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-13	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	21.4883758638283	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739950	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.18	chr9	-	6261	31	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-24	-5	intron_retention	FALSE	canonical	3	20	junction_20	18.7473257352141	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739961	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.19	chr9	-	4827	26	NNC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-6498	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	22.5163407328989	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45721052	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691156_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713951_45714076_45714470_45714627_45721001
ES.34926.2	chr9	-	6777	29	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-6498	5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_28	23.7779642028634	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGAGTGTGCTGGTCT	NA	False	NA	42	True	ATTAAA	-30	NA	45721052	45678238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45717283_45718943_45721001
ES.34926.20	chr9	-	5518	30	FSM	ENSMUSG00000043987.19	ENSMUST00000117194.8	5541	30	18	5	18	-5	multi-exon	FALSE	canonical	3	5	junction_18	19.7537756592073	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739971	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.21	chr9	-	5659	30	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	18	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.7055861706814	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739971	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686203_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714067_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.23	chr9	-	7444	32	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-4881	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	24.68705272649	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45744870	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45717283_45718943_45721001_45721207_45729275_45729388_45734943_45735063_45744728
ES.34926.24	chr9	-	5923	32	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.4156088904634	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGCAGTCCTGTGAGT	NA	False	NA	32	True	ATTAAA	-20	NA	45739911	45678248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691156_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.25	chr9	-	2969	13	NNC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-3913	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	21.6942132581223	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAGGCAGTCCTGTGAG	NA	False	NA	31	True	ATTAAA	-19	NA	45687742	45678249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45687687
ES.34926.26	chr9	-	5720	31	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	51	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	21.2141462236876	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGAGGCAGTCCTGTGAG	NA	False	NA	31	True	ATTAAA	-19	NA	45739886	45678249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.27	chr9	-	4120	9	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-3771	5	intron_retention	FALSE	canonical	0	0	junction_8	25.2289516230857	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGGCAGTCCTGTGA	NA	False	NA	30	True	ATTAAA	-18	NA	45687600	45678250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45687162
ES.34926.28	chr9	-	5101	31	NNC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6908582894576	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGAGGCAGTCCTG	NA	False	NA	27	True	ATTAAA	-15	NA	45739979	45678253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45678945_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.29	chr9	-	4846	10	NIC	ENSMUSG00000043987.19	novel	4819	26	NA	NA	-4642	0	intron_retention	FALSE	canonical	3	64	junction_2	5.22340412157474	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTATGAGGCAGTCC	NA	False	NA	25	True	ATTAAA	-13	NA	45688471	45678255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45680774_45681992_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45687044_45687162_45687247_45688080
ES.34926.3	chr9	-	4262	16	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-6946	4	intron_retention	FALSE	canonical	3	46	junction_14	11.0987486782169	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	41	True	ATTAAA	-29	NA	45690775	45678239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679
ES.34926.31	chr9	-	5808	32	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-4860	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.2446429847559	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCGTTTTGTTACTTC	NA	False	NA	35	True	NA	NA	NA	45744849	45678378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685088_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45744728
ES.34926.32	chr9	-	4761	10	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-4716	-159	intron_retention	FALSE	canonical	3	64	junction_2	5.22340412157474	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTTTAGTCATCGG	NA	False	NA	-1	True	AATAAA	-32	NA	45688545	45678414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45680774_45681992_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45687044_45687162_45687247_45688080
ES.34926.33	chr9	-	5767	32	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-8	-162	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	18.7691490839651	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATATTTTTTAGTCAT	NA	False	NA	-4	True	AATAAA	-29	NA	45739945	45678417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.34	chr9	-	5577	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	32	-165	combination_of_known_junctions	FALSE	canonical	3	4	junction_19	20.1793348640523	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTAGATATTTTTTAGT	NA	False	NA	-7	True	AATAAA	-26	NA	45739905	45678420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.37	chr9	-	5176	29	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-22	-179	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	18.9283018848733	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGCTTTTTACCCTTT	NA	False	NA	-21	True	AATAAA	-12	NA	45739959	45678434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.38	chr9	-	4321	23	ISM	ENSMUSG00000043987.19	ENSMUST00000117194.8	5541	30	34295	192	-130	-180	3prime_fragment	FALSE	canonical	3	5	junction_18	20.6945515247351	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGGCTTTTTACCCTT	NA	False	NA	-22	True	AATAAA	-11	NA	45705694	45678435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349
ES.34926.39	chr9	-	1185	8	NNC	ENSMUSG00000043987.19	novel	360	4	NA	NA	-13	-7594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.0753210951691	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGAGTTTCTCCGGCC	NA	False	NA	NA	False	AATAAA	-13	NA	45739950	45711029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45711259_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.5	chr9	-	5362	29	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-13	4	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	18.9283018848733	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGAGTGTGCTGGTC	NA	False	NA	41	True	ATTAAA	-29	NA	45739950	45678239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.6	chr9	-	5966	32	NNC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	20.1797850654104	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTGAGTGTGCTGGT	NA	False	NA	40	True	ATTAAA	-28	NA	45739943	45678240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697244_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.7	chr9	-	5640	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-1	3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8072938305284	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTGAGTGTGCTGGT	NA	False	NA	40	True	ATTAAA	-28	NA	45739938	45678240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.8	chr9	-	5418	29	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	-5	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	22.4090850289952	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTGTGAGTGTGCTGG	NA	False	NA	39	True	ATTAAA	-27	NA	45739942	45678241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690679_45690909_45690987_45691135_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34926.9	chr9	-	5964	32	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	18.7691490839651	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	37	True	ATTAAA	-25	NA	45739968	45678243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ES.34927.1	chr9	+	3737	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	-75	2396	-75	-216	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGGTCCTCTTCCTTG	7223	False	NA	NA	False	AATAAA	-25	NA	45749802	45773301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.10	chr9	+	3708	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	1	19	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.80924932371864	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7299	False	NA	NA	False	NA	NA	NA	45749878	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45750587_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.11	chr9	+	4410	7	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	1	19	intron_retention	FALSE	canonical	0	0	junction_1	8.73053390247253	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7299	False	NA	NA	False	NA	NA	NA	45749878	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45750587_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576
ES.34927.12	chr9	+	3470	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	1	-219	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.80924932371864	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTGGGTCCTCTTCC	7299	False	NA	NA	False	AATAAA	-22	NA	45749878	45773298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45750587_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.13	chr9	+	3150	9	NIC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	-25	19	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	8.98523093748847	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	8611	False	NA	NA	False	NA	NA	NA	45751190	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45751341_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.14	chr9	+	2902	9	NIC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	-18	-222	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	8.98523093748847	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCAGCTGGGTCCTCT	8618	False	NA	NA	False	AATAAA	-19	NA	45751197	45773295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45751341_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.15	chr9	+	3284	9	NIC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	29	19	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	7.24568837309472	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	8665	False	NA	NA	False	NA	NA	NA	45751244	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45751341_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.16	chr9	+	3214	9	NNC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	1614	-78	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.17537465175128	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTCGCTTGTAAAAATA	NA	False	NA	NA	False	CATAAA	-45	NA	45752829	45773704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45752876_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.17	chr9	+	5289	9	NNC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	-5346	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.57862203033401	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGAGTTACATTTGTT	NA	False	NA	NA	False	AGTAAA	-18	NA	45758674	45775702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45758798_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.18	chr9	+	3093	11	NNC	ENSMUSG00000032086.13	novel	3146	8	NA	NA	-5343	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.6939235082359	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTTCCAGCTGGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	45758677	45773292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45758798_45763144_45763208_45763284_45763439_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.19	chr9	+	5137	8	ISM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	12359	2161	-1784	19	3prime_fragment	FALSE	canonical	3	12	junction_1	4.82341229032404	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	NA	False	NA	NA	False	NA	NA	NA	45762236	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.2	chr9	+	3941	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	-44	2161	-44	19	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAGAGAGAGAGAACTC	7254	False	NA	NA	False	NA	NA	NA	45749833	45773536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.3	chr9	+	4992	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	-34	1100	-34	815	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTCCATTTTGCCACCT	7264	False	NA	NA	False	AATAAA	-11	NA	45749843	45774597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.4	chr9	+	5990	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	8.3132048573339	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGTTACATTTGTTCC	7298	False	NA	NA	False	AGTAAA	-20	NA	45749877	45775704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45750587_45764185_45764275_45765924_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.5	chr9	+	3879	9	NIC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	0	-76	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.80924932371864	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCGCTTGTAAAAATATG	7298	False	NA	NA	False	AAAACA	-22	NA	45749877	45773706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45750587_45764185_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.6	chr9	+	6063	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	-5	0	5	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGAGTTACATTTGTT	7298	False	NA	NA	False	AGTAAA	-18	NA	45749877	45775702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.7	chr9	+	3717	10	NNC	ENSMUSG00000032086.13	novel	6058	9	NA	NA	0	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.3571125650788	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCAGCTGGGTCCTCT	7298	False	NA	NA	False	AATAAA	-19	NA	45749877	45773295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45769983_45770045_45770207_45770358_45770576_45770749_45771351
ES.34927.8	chr9	+	4110	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	1948	0	-33	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCCTGAAAAATGACTGA	7298	False	NA	NA	False	NA	NA	NA	45749877	45773749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34927.9	chr9	+	3221	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	1	2836	1	-656	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGGGCTTTCTGTTCTA	7299	False	NA	NA	False	ATTAAA	-14	NA	45749878	45772861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ES.34928.1	chr9	+	3708	2	Antisense	novelGene_ENSMUSG00000042790.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCCCCTCCTGATGAGG	NA	False	NA	NA	False	NA	NA	NA	45777695	45781509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45778930_45779035
ES.34929.1	chr9	+	4649	1	Antisense	novelGene_ENSMUSG00000042790.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGACTAATCTCCTA	NA	False	NA	NA	False	NA	NA	NA	45800328	45804977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45800300_45805000
ES.34929.2	chr9	+	1664	2	Antisense	novelGene_ENSMUSG00000042790.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45800329	45804942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45800712_45803660
ES.3493.1	chr10	+	5835	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	-46	-1	-46	1	multi-exon	TRUE	canonical	3	26	junction_1	8.15379512865022	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATCCTCTTTATGGTA	NA	False	NA	14	True	ATTAAA	-19	NA	85222631	85496157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.10	chr10	+	4274	17	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-102317	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5573683548744	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85331947	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85332099_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.11	chr10	+	9122	15	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-53163	-1	intron_retention	FALSE	canonical	0	0	junction_1	12.2516138045698	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTGCATCCTCTTTA	NA	False	NA	9	True	ATTAAA	-14	NA	85381101	85496152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85381183_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341
ES.3493.13	chr10	+	1820	3	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	-1888	-1893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCCAGCTCCTTGGAT	NA	False	NA	NA	False	AATGAA	-15	NA	85432376	85440020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85432405_85434588_85434742_85438381
ES.3493.14	chr10	+	3795	15	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-1888	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.689582743498	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCATCCTCTTTATGG	NA	False	NA	12	True	ATTAAA	-17	NA	85432376	85496155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85432405_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.15	chr10	+	3830	15	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-264	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.689582743498	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85434000	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85434063_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.16	chr10	+	3943	15	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-241	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.689582743498	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85434023	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85434199_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.17	chr10	+	592	3	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	-170	-3038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTGTTCCCTCCAG	NA	False	NA	NA	False	CATAAA	-11	NA	85434094	85438875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85434199_85434588_85434742_85438540
ES.3493.18	chr10	+	5033	3	NNC	ENSMUSG00000020042.16	novel	560	3	NA	NA	-142	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGTGTTAAAACTGAC	NA	False	NA	NA	False	AGTAAA	-28	NA	85434122	85442942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85434442_85434588_85434742_85438381
ES.3493.19	chr10	+	2591	15	FSM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	-6	1360	-6	672	multi-exon	FALSE	canonical	0	0	junction_1	12.689582743498	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCGACTGAATTGTGTT	NA	False	NA	NA	False	AATATA	-22	NA	85434258	85494796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.20	chr10	+	3946	15	FSM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	-4	3	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	12.689582743498	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCATCCTCTTTAT	NA	False	NA	10	True	ATTAAA	-15	NA	85434260	85496153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.21	chr10	+	3348	15	FSM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	-1	598	-1	-595	multi-exon	FALSE	canonical	0	0	junction_1	12.689582743498	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTCTTGAGTTGCGG	NA	False	NA	NA	False	NA	NA	NA	85434263	85495558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.22	chr10	+	2158	12	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	5	11945	-5	6711	5prime_fragment	FALSE	canonical	0	0	junction_1	14.1169846708972	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAAATCCTGTTCCC	NA	False	NA	NA	False	ATTAAA	-10	NA	85434269	85484211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575
ES.3493.25	chr10	+	3861	14	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-4963	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.3872429128619	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTGCATCCTCTTTA	NA	False	NA	9	True	ATTAAA	-14	NA	85460415	85496152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85460666_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.26	chr10	+	3633	13	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	26484	0	-4630	0	3prime_fragment	FALSE	canonical	3	37	junction_10	5.1713688280334	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85460748	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.27	chr10	+	3029	13	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	26493	595	-4621	-592	3prime_fragment	FALSE	canonical	3	37	junction_10	5.1713688280334	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGAGTTGCGGCCC	NA	False	NA	NA	False	NA	NA	NA	85460757	85495561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.28	chr10	+	2602	7	ISM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	34119	1368	3005	664	3prime_fragment	FALSE	canonical	3	37	junction_4	4.70519807116437	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTCATTTTCGACTGA	NA	False	NA	NA	False	AATATA	-14	NA	85468383	85494788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.3	chr10	+	5960	18	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.6543547784446	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85222667	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483009_85483172_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.30	chr10	+	1248	6	NNC	ENSMUSG00000020042.16	novel	2806	5	NA	NA	-983	663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.0716138662986	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTTCATTTTCGACTG	NA	False	NA	NA	False	AATATA	-13	NA	85480083	85494787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85480180_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.31	chr10	+	2388	2	FSM	ENSMUSG00000020042.16	ENSMUST00000145433.2	555	2	198	-2031	198	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCATCCTCTTTATGG	NA	False	NA	12	True	ATTAAA	-17	NA	85490219	85496155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85490456_85494003
ES.3493.4	chr10	+	5117	12	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	14.6834364433236	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCATCCTCTTTAT	NA	False	NA	10	True	ATTAAA	-15	NA	85222668	85496153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469671_85494150
ES.3493.5	chr10	+	5845	18	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.4534684967911	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85222677	85496156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85464662_85464720_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.6	chr10	+	5178	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	18	592	5	-589	multi-exon	FALSE	canonical	3	26	junction_1	8.15379512865022	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGAGTTGCGGCCCTTT	NA	False	NA	NA	False	NA	NA	NA	85222695	85495564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ES.3493.7	chr10	+	5739	17	NNC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	13.017866328627	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGCATCCTCTTTATG	NA	False	NA	11	True	ATTAAA	-16	NA	85222711	85496154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487524_85490338_85490456_85494003
ES.3493.9	chr10	+	3509	1	Intergenic	novelGene_2681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGTGTAACTTGCCG	NA	False	NA	NA	False	NA	NA	NA	85276043	85279552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_85276000_85279600
ES.34930.1	chr9	+	181	1	Intergenic	novelGene_28350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	45808605	45808786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45808600_45808800
ES.34931.1	chr9	+	6195	15	NIC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-45	-3	intron_retention	FALSE	canonical	0	0	junction_3	11.98042621299	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45817749	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45819950_45820557_45821035_45821672_45821822_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.10	chr9	+	4137	16	NIC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	-44	-20	intron_retention	FALSE	canonical	0	0	junction_15	13.9926965076627	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGCAGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	45818238	45840990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839808
ES.34931.11	chr9	+	4949	17	FSM	ENSMUSG00000111521.2_ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	444	-1517	-44	-1209	multi-exon	FALSE	canonical	3	28	junction_7	6.25	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTTCTCCTTGACTGA	NA	False	NA	NA	False	NA	NA	NA	45818238	45842527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.12	chr9	+	4996	17	NIC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	-27	-3	intron_retention	FALSE	canonical	1	5	junction_13	12.1751540031328	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45818255	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.13	chr9	+	3505	18	NNC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.451685405954	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAACAAGTCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	45818256	45841010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830661_45831089_45831193_45837208_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.14	chr9	+	3509	18	NNC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	-21	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3370972334254	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAACAAGTCCACCACT	NA	False	NA	NA	False	AATAAA	-17	NA	45818261	45841014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45818491_45818602_45819825_45819950_45820557_45821035_45821672_45821822_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45837215_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.16	chr9	+	3172	18	NNC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.9497120405802	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATTTTGTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	45818265	45840953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45819825_45819950_45820557_45820691_45820866_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.17	chr9	+	3519	18	NNC	ENSMUSG00000035382.10	novel	3599	17	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6807393717513	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45818272	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45818491_45818602_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.18	chr9	+	3928	17	NNC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.343443624179	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGAATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	45818281	45840957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826432_45829141_45829928_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.19	chr9	+	5767	17	FSM	ENSMUSG00000111521.2_ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	495	-2386	7	-340	multi-exon	FALSE	canonical	3	28	junction_7	6.25	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACATCAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	45818289	45843396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.2	chr9	+	3959	17	NNC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-44	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.2860533402957	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTCCACCACTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45817750	45841018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837177_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.20	chr9	+	3462	18	NIC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	11.9064984727817	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAACAAGTCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	45818290	45841010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.21	chr9	+	4870	16	NIC	ENSMUSG00000035382.10	novel	3599	17	NA	NA	17	-3	intron_retention	FALSE	canonical	3	28	junction_6	6.42702626933068	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45818299	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.23	chr9	+	6095	17	FSM	ENSMUSG00000111521.2_ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	507	-2726	19	0	multi-exon	FALSE	canonical	3	28	junction_7	6.25	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTTGTTTCATAGT	NA	False	NA	NA	False	NA	NA	NA	45818301	45843736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.24	chr9	+	5146	16	NNC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	580	-3	intron_retention	FALSE	canonical	1	1	junction_10	15.1026119889537	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45818862	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837212_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.3	chr9	+	3926	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	-39	-11	-39	-3	multi-exon	FALSE	canonical	3	28	junction_7	6.25	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCCACCACTCCCAGTA	NA	False	NA	NA	False	AATAAA	-24	NA	45817755	45841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.4	chr9	+	8969	7	NIC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-28	-2072	intron_retention	FALSE	canonical	3	28	junction_5	5.64702478203247	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	45817766	45835162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45818338_45819825_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45827387_45830059
ES.34931.5	chr9	+	4127	17	NIC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.9484262105085	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCACTCCCAGTATTC	NA	False	NA	NA	False	AATAAA	-27	NA	45817814	45841024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45818602_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837215_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.6	chr9	+	4614	16	NIC	ENSMUSG00000035382.10	novel	3876	17	NA	NA	-15	5	intron_retention	FALSE	canonical	3	28	junction_7	6.32947250742289	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACAAGTCCACCACTC	NA	False	NA	NA	False	AATAAA	-18	NA	45817822	45841015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34931.7	chr9	+	6012	16	NIC	ENSMUSG00000035382.10	novel	3893	18	NA	NA	6	0	intron_retention	FALSE	canonical	1	2	junction_10	14.7551874117395	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACCACTCCCAGTATTC	NA	False	NA	NA	False	AATAAA	-27	NA	45817843	45841024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837215_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.8	chr9	+	3859	18	FSM	ENSMUSG00000035382.10	ENSMUST00000215189.2	3893	18	28	6	28	-6	multi-exon	FALSE	canonical	1	2	junction_12	14.204390373485	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTCCACCACTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45817894	45841018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837215_45837366_45838031_45838127_45838334_45838417_45838872_45838967_45839184_45839303_45839808
ES.34931.9	chr9	+	4047	17	FSM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	-387	-61	29	-6	multi-exon	FALSE	canonical	0	0	junction_1	11.2261900816795	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTCCACCACTCCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45817895	45841018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45818602_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ES.34932.1	chr9	-	8375	1	FSM	ENSMUSG00000111128.2	ENSMUST00000216609.2	2079	1	143	-6439	143	6439	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTTCTGTTTGGTTAC	7785	False	NA	NA	False	AATAAA	-14	NA	45771837	45763462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45763500_45771800
ES.34932.10	chr9	-	4130	14	FSM	ENSMUSG00000042790.17	ENSMUST00000161187.8	2847	14	-8	-1275	-8	1009	multi-exon	FALSE	canonical	3	5	junction_11	14.9741394434206	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGAAGCTGTTGTCAAGA	9582	False	NA	NA	False	AATACA	-12	NA	45817713	45773713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ES.34932.11	chr9	-	3895	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	441	-372	-29	288	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAGTGGCACAAGCCT	9561	False	NA	NA	False	NA	NA	NA	45817734	45774434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.12	chr9	-	3789	14	FSM	ENSMUSG00000042790.17	ENSMUST00000160699.9	2287	14	28	-1530	-6	121	multi-exon	FALSE	canonical	1	1	junction_13	15.6941929485938	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTTCCTTTGTTTATT	9114	False	NA	NA	False	AAAAAG	-15	NA	45818181	45774601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
ES.34932.13	chr9	-	3673	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	452	-161	-18	77	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGGTACTACTTGA	9572	False	NA	NA	False	AATGAA	-20	NA	45817723	45774645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.15	chr9	-	3604	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-15	-10	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTCTTTTCTCTTG	9575	False	NA	7	True	ACTAAA	-37	NA	45817720	45774816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.16	chr9	-	3504	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	443	17	-27	-17	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCATGGATGAATTCTTT	9563	False	NA	0	True	ACTAAA	-30	NA	45817732	45774823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.18	chr9	-	3581	14	FSM	ENSMUSG00000042790.17	ENSMUST00000160699.9	2287	14	8	-1302	8	-23	multi-exon	FALSE	canonical	1	1	junction_13	15.6941929485938	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAGCTCATGGATGAA	9094	False	NA	-6	True	ACTAAA	-24	NA	45818201	45774829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
ES.34932.19	chr9	-	3093	14	NIC	ENSMUSG00000042790.17	novel	3294	15	NA	NA	-6	-26	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	19.0852959293289	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTATGAGCTCATGGAT	9114	False	NA	-9	True	ACTAAA	-21	NA	45818181	45774832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45818035
ES.34932.2	chr9	-	4943	1	FSM	ENSMUSG00000111128.2	ENSMUST00000216609.2	2079	1	-1029	-1835	-1029	1835	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGGCATATACTTGG	6613	False	NA	-1	True	AATAAA	-15	NA	45773009	45768066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45768100_45773000
ES.34932.20	chr9	-	3465	14	NNC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	17	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	15.9154571140112	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGCCTATGAGCTCAT	9641	False	NA	-13	True	ACTAAA	-17	NA	45817654	45774836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817597
ES.34932.21	chr9	-	3336	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	454	174	-16	8	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCTGGGGGAAGGGTAA	9574	False	NA	NA	False	ATTAAA	-22	NA	45817721	45774980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.22	chr9	-	3410	14	FSM	ENSMUSG00000042790.17	ENSMUST00000160699.9	2287	14	28	-1151	-6	8	multi-exon	FALSE	canonical	1	1	junction_13	15.6941929485938	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCTGGGGGAAGGGTAA	9114	False	NA	NA	False	ATTAAA	-22	NA	45818181	45774980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
ES.34932.23	chr9	-	3059	14	NNC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-10	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.1556775518628	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATCTGGGGGAAGGGTAA	9580	False	NA	NA	False	ATTAAA	-22	NA	45817715	45774980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779143_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.24	chr9	-	2752	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	429	783	-41	-2	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTCCATTTCTCCCAC	9549	False	NA	NA	False	AGTAAA	-25	NA	45817746	45775589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.25	chr9	-	2844	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGGTTCCATTTCTC	9558	False	NA	NA	False	AGTAAA	-21	NA	45817737	45775593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.26	chr9	-	2326	15	NIC	ENSMUSG00000042790.17	novel	3294	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	18.0899114967206	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGGTTCCATTTCTC	9611	False	NA	NA	False	AGTAAA	-21	NA	45817684	45775593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ES.34932.27	chr9	-	2856	15	NIC	ENSMUSG00000042790.17	novel	3294	15	NA	NA	-10	-47	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	18.6340975589572	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGGATATTCTGTTTTA	9110	False	NA	NA	False	NA	NA	NA	45818185	45775643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
ES.34932.28	chr9	-	2571	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	509	884	5	-94	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTACTGTGTTAATC	9629	False	NA	NA	False	NA	NA	NA	45817666	45775690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.29	chr9	-	2307	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	429	1228	-41	97	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCCCTCATCTTGCA	9549	False	NA	NA	False	AATGAA	-26	NA	45817746	45776034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.3	chr9	-	5713	1	FSM	ENSMUSG00000111128.2	ENSMUST00000216609.2	2079	1	-3633	-1	-3633	1	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCTCAATGCCAAGTCA	4009	False	NA	NA	False	NA	NA	NA	45775613	45769900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45769900_45775600
ES.34932.30	chr9	-	2381	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-17	90	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACCCCTTTTCCCCTCA	9573	False	NA	NA	False	AATGAA	-19	NA	45817722	45776041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.31	chr9	-	2474	15	NIC	ENSMUSG00000042790.17	novel	3294	15	NA	NA	8	90	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	18.6340975589572	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACCCCTTTTCCCCTCA	9094	False	NA	NA	False	AATGAA	-19	NA	45818201	45776041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45818035
ES.34932.32	chr9	-	3645	12	NIC	ENSMUSG00000042790.17	novel	2847	14	NA	NA	-40	0	intron_retention	FALSE	canonical	3	5	junction_9	15.8932388556365	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCGTGTACATTTTTA	9550	False	NA	NA	False	NA	NA	NA	45817745	45776131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45778931_45779036_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ES.34932.33	chr9	-	1880	10	ISM	ENSMUSG00000042790.17	ENSMUST00000162369.8	3517	13	-63	4436	-29	151	5prime_fragment	FALSE	canonical	3	35	junction_9	7.5293663760433	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAACTCCTAAAATTT	9561	False	NA	NA	False	NA	NA	NA	45817734	45780023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.34	chr9	-	1702	10	NNC	ENSMUSG00000042790.17	novel	3517	13	NA	NA	-6	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.7671047730112	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCACGAAAAAACATTGTT	9600	False	NA	NA	False	NA	NA	NA	45817695	45780159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802239_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.35	chr9	-	3792	2	FSM	ENSMUSG00000042790.17	ENSMUST00000100407.4	437	2	-3340	-15	-568	15	multi-exon	FALSE	canonical	3	59	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCACGAAAAAACATTGTT	3569	False	NA	NA	False	NA	NA	NA	45784127	45780159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45780576_45780751
ES.34932.4	chr9	-	4803	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-7	1129	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACACCAGTTACTAGGG	9599	False	NA	NA	False	AATAAA	-28	NA	45817696	45773593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.5	chr9	-	4264	12	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	1451	1116	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.7844871314099	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAATAGAACA	NA	False	NA	NA	False	AATAAA	-15	NA	45816220	45773606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778797_45778931_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
ES.34932.6	chr9	-	4679	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	485	-1200	-1	1116	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAATAGAACA	9605	False	NA	NA	False	AATAAA	-15	NA	45817690	45773606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.8	chr9	-	4602	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	459	-1097	-11	1013	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGTTGTCAAGATTTT	9579	False	NA	NA	False	AATACA	-16	NA	45817716	45773709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34932.9	chr9	-	4684	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	-6	1011	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTGTTGTCAAGATT	9600	False	NA	NA	False	AATACA	-14	NA	45817695	45773711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ES.34933.1	chr9	+	4391	8	Antisense	novelGene_ENSMUSG00000034908.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAACCAAAAAAAAAAAA	816	False	NA	NA	False	NA	NA	NA	45853564	45860232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45854094_45854349_45854486_45854875_45854996_45855663_45855785_45855913_45855990_45856442_45856512_45856586_45856658_45856963
ES.34934.1	chr9	+	177	1	Intergenic	novelGene_28351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGCACATCCTTG	3734	False	NA	NA	False	NA	NA	NA	45862361	45862538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45862400_45862500
ES.34935.1	chr9	+	4636	6	Antisense	novelGene_ENSMUSG00000003131.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGCACA	NA	False	NA	NA	False	NA	NA	NA	45879383	45895678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45880268_45884242_45884357_45886373_45886496_45887338_45887432_45889942_45890026_45892338
ES.34935.2	chr9	+	2909	2	Antisense	novelGene_ENSMUSG00000003131.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACAACCCAGTCACAGGC	NA	False	NA	NA	False	NA	NA	NA	45891224	45895692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_45893199_45894757
ES.34936.1	chr9	-	4806	25	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	157	36	intron_retention	FALSE	canonical	3	112	junction_15	17.3188541287619	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGCCTTCCCGTCTCG	NA	False	NA	22	True	NA	NA	NA	45866118	45849118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.10	chr9	-	6775	21	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	22	-1	intron_retention	FALSE	canonical	3	113	junction_19	15.5963938139558	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGGGAGGTGCAGGA	NA	False	NA	-15	True	AATAAA	-33	NA	45866510	45849155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45856509_45856583_45856658_45856963_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.11	chr9	-	5213	24	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	2	-2	intron_retention	FALSE	canonical	3	113	junction_22	15.9036560574114	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGGAGGTGCAGG	NA	False	NA	-16	True	AATAAA	-32	NA	45866530	45849156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.12	chr9	-	6628	3	Fusion	ENSMUSG00000034908.17_ENSMUSG00000098327.3	novel	817	5	NA	NA	-508	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	82.5	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGGAGGTGCAG	NA	False	NA	-17	True	AATAAA	-31	NA	45856839	45849157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_45851510_45851896_45854994_45855660
ES.34936.13	chr9	-	4260	26	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-33	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	32.7804819976766	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGGAGGTGCAG	NA	False	NA	-17	True	AATAAA	-31	NA	45866589	45849157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857065_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.14	chr9	-	4455	26	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	5	junction_16	31.9102240669037	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTGTTGGGAGGTGC	NA	False	NA	-19	True	AATAAA	-29	NA	45866561	45849159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.15	chr9	-	6198	23	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	113	junction_21	16.1468595825989	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTGTTGGGAGGTGC	NA	False	NA	-19	True	AATAAA	-29	NA	45866558	45849159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.17	chr9	-	4277	27	FSM	ENSMUSG00000034908.17	ENSMUST00000114573.9	4012	27	-263	-2	-6	2	multi-exon	FALSE	canonical	3	14	junction_15	37.8730361062501	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTCTTACTGATGTG	NA	False	NA	-30	True	AATAAA	-18	NA	45866538	45849170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45857803_45857867_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.18	chr9	-	4161	25	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	33.5676917668695	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGTCTTACTGATGT	NA	False	NA	-31	True	AATAAA	-17	NA	45866558	45849171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.2	chr9	-	4311	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	-28	-35	-28	35	multi-exon	FALSE	canonical	3	112	junction_16	17.0789226826519	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGGCCTTCCCGTCTC	NA	False	NA	21	True	NA	NA	NA	45866584	45849119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.20	chr9	-	4259	30	Fusion	ENSMUSG00000034908.17_ENSMUSG00000003131.8	novel	4012	27	NA	NA	-15	0	multi-exon	FALSE	canonical	0	0	junction_25	83.9944083977782	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	4113	False	NA	-32	True	AATAAA	-16	NA	45896148	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.21	chr9	-	4204	26	NNC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.6090539574518	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866558	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854470_45854887_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.22	chr9	-	4131	28	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	49.975412335812	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866325	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45857803_45857867_45858042_45858115_45858281_45858354_45858926_45858996_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.23	chr9	-	4292	27	NNC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	45.8156842476124	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866541	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45857803_45857867_45858042_45858115_45858281_45858368_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.25	chr9	-	4260	26	NNC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	32.7676425761757	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866572	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858368_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.27	chr9	-	6059	23	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	1	0	intron_retention	FALSE	canonical	3	113	junction_21	16.5796350237471	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866478	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.28	chr9	-	4253	26	NNC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	33.2588875340111	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866570	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864037_45864212_45864422_45864545_45866021
ES.34936.29	chr9	-	5929	24	NNC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_3	33.9724674467935	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866502	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853161_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.3	chr9	-	6986	6	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-223	12	intron_retention	FALSE	canonical	3	124	junction_3	17.7245592328836	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGAGCCTCCGTGTCCC	NA	False	NA	-2	True	NA	NA	NA	45859312	45849142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45854092_45854348_45854486_45854875_45854994_45855660
ES.34936.30	chr9	-	4507	16	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-1516	0	intron_retention	FALSE	canonical	3	124	junction_6	12.4304286151184	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45861121	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45859187_45859512_45859607_45861073
ES.34936.31	chr9	-	4131	25	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	43.0133821230866	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866589	45849172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857065_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.32	chr9	-	6047	23	NNC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	31	-1	intron_retention	FALSE	canonical	0	0	junction_4	34.3550975442179	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGGTCTTACTGAT	NA	False	NA	-33	True	AATAAA	-15	NA	45866448	45849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853300_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.33	chr9	-	6451	22	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	113	junction_20	15.7951742106465	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGGTCTTACTGAT	NA	False	NA	-33	True	AATAAA	-15	NA	45866568	45849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853541_45853690_45853768_45853982_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.34	chr9	-	4240	26	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	32.7840448999204	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGGTCTTACTGAT	NA	False	NA	-33	True	AATAAA	-15	NA	45866580	45849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850806_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.36	chr9	-	4127	25	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	33.4576847176649	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGGTCTTACTGAT	NA	False	NA	-33	True	AATAAA	-15	NA	45866568	45849173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.37	chr9	-	5733	25	ISM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	-28	20	-28	-2	intron_retention	FALSE	canonical	3	112	junction_16	17.3404933128597	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTGGGGTCTTACTGA	NA	False	NA	-34	True	AATAAA	-14	NA	45866584	45849174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422
ES.34936.38	chr9	-	4267	26	NNC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.1953249720499	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTGGGGTCTTACTGA	NA	False	NA	-34	True	AATAAA	-14	NA	45866582	45849174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853161_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.4	chr9	-	4512	29	Fusion	ENSMUSG00000034908.17_ENSMUSG00000003131.8	novel	4248	26	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_15	90.6068753867329	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	4122	False	NA	-14	True	AATAAA	-34	NA	45896139	45849154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858368_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45884222_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.40	chr9	-	4854	25	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	76	-3	intron_retention	FALSE	canonical	3	113	junction_23	15.9711110724611	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTTGGGGTCTTACTG	NA	False	NA	-35	True	AATAAA	-13	NA	45866403	45849175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.42	chr9	-	4166	26	NNC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.8943520988026	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTTGGGGTCTTACTG	NA	False	NA	-35	True	AATAAA	-13	NA	45866476	45849175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853300_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.43	chr9	-	2848	25	NNC	ENSMUSG00000034908.17	novel	1754	16	NA	NA	3	1340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.6296981434895	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTGGACATTGTGG	NA	False	NA	NA	False	TATAAA	-19	NA	45866529	45852303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45852505_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.44	chr9	-	6629	6	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.121817201898	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTTTTTGTTTGTTTA	4152	False	NA	NA	False	CATAAA	-14	NA	45896109	45874158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896004
ES.34936.46	chr9	-	6610	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	2	-5818	2	-7	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTATTTTTTGTTT	9713	False	NA	NA	False	CATAAA	-9	NA	45896690	45874163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
ES.34936.47	chr9	-	5283	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	223	1367	-1	-1367	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAACTAGTCAAATAGAAT	4135	False	NA	NA	False	AATAAA	-29	NA	45896126	45875523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.48	chr9	-	4262	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-4	-3464	-4	-2361	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGTCCTCTGGAACT	9707	False	NA	92	True	TATAAA	-19	NA	45896696	45876517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
ES.34936.49	chr9	-	4402	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	19	2452	19	-2452	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTGTTTCTTTTAT	3931	False	NA	1	True	TATAAA	-25	NA	45896330	45876608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.50	chr9	-	4402	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-19	-2456	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	171.694253446837	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4109	False	NA	-3	True	TATAAA	-21	NA	45896152	45876612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892523_45896002
ES.34936.51	chr9	-	4201	6	FSM	ENSMUSG00000003131.8	ENSMUST00000215060.2	714	6	-17	-3470	-6	-2456	multi-exon	FALSE	canonical	3	7	junction_5	147.373539008874	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4122	False	NA	-3	True	TATAAA	-21	NA	45896139	45876612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890022_45896002
ES.34936.53	chr9	-	4267	6	NIC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-20	-2456	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	150.121817201898	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4108	False	NA	-3	True	TATAAA	-21	NA	45896153	45876612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45895956
ES.34936.55	chr9	-	8153	5	NIC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	12	-2456	intron_retention	FALSE	canonical	3	321	junction_4	37.1954298267946	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4151	False	NA	-3	True	TATAAA	-21	NA	45896110	45876612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.56	chr9	-	4271	6	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-6	-2459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.121817201898	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACTGATGTCTGTTT	4122	False	NA	-6	True	TATAAA	-18	NA	45896139	45876615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45895935
ES.34936.57	chr9	-	4288	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-20	-2461	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	172.88210497973	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTACTGATGTCTGT	4160	False	NA	-8	True	TATAAA	-16	NA	45896101	45876617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892465_45896002
ES.34936.58	chr9	-	3485	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	-74	3462	-74	2363	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAGTCCACTGTCATT	9980	False	NA	0	True	AATAAA	-26	NA	45896423	45877618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.59	chr9	-	3160	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	-4	-2362	-4	2362	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGAGTCCACTGTCAT	9707	False	NA	-1	True	AATAAA	-25	NA	45896696	45877619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
ES.34936.6	chr9	-	5971	24	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	-7	0	intron_retention	FALSE	canonical	3	113	junction_22	16.2235097445344	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	NA	False	NA	-14	True	AATAAA	-34	NA	45866539	45849154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.60	chr9	-	3379	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-3	2362	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	171.694253446837	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGAGTCCACTGTCAT	4125	False	NA	-1	True	AATAAA	-25	NA	45896136	45877619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892523_45896002
ES.34936.61	chr9	-	3386	7	NIC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-4	2361	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	174.484717573393	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGAGTCCACTGTCA	4124	False	NA	-2	True	AATAAA	-24	NA	45896137	45877620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45895148_45895338_45896002
ES.34936.62	chr9	-	3200	6	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-15	2361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.501368414482	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGAGTCCACTGTCA	4113	False	NA	-2	True	AATAAA	-24	NA	45896148	45877620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887421_45889939_45890028_45896002
ES.34936.63	chr9	-	5504	1	NIC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	12511	2361	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGAGTCCACTGTCA	NA	False	NA	-2	True	AATAAA	-24	NA	45883124	45877620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45877600_45883100
ES.34936.64	chr9	-	3294	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	12	2361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	172.88210497973	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGGAGTCCACTGTCA	4151	False	NA	-2	True	AATAAA	-24	NA	45896110	45877620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892465_45896002
ES.34936.65	chr9	-	3189	6	NNC	ENSMUSG00000003131.8	novel	714	6	NA	NA	1	2360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.121817201898	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATATGGAGTCCACTGTC	4129	False	NA	-3	True	AATAAA	-23	NA	45896132	45877621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890022_45895998
ES.34936.68	chr9	-	2751	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	258	3864	-10	1961	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTTTACTACAGTAA	4170	False	NA	NA	False	AATATA	-14	NA	45896091	45878020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.69	chr9	-	2552	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	211	4110	-5	1715	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGATTTTGCTTAATGG	4123	False	NA	NA	False	ATTAAA	-9	NA	45896138	45878266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.7	chr9	-	5324	25	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_2	42.4416061260122	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	NA	False	NA	-14	True	AATAAA	-34	NA	45866478	45849154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850806_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45858354_45858926_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34936.70	chr9	-	2194	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	185	4494	-31	1331	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTGTTTTGGTCTTT	4097	False	NA	NA	False	AATAAA	-9	NA	45896164	45878650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.71	chr9	-	1538	7	NIC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-19	498	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	174.484717573393	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGAGTTTGTTCCTCT	4109	False	NA	-2	True	ATTAAA	-37	NA	45896152	45879483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45895148_45895338_45896002
ES.34936.72	chr9	-	1361	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	185	5327	-31	498	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGAGTTTGTTCCTCT	4097	False	NA	-2	True	ATTAAA	-37	NA	45896164	45879483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.73	chr9	-	2753	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	-213	494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	172.88210497973	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAAGTGAGTTTGTTC	4413	False	NA	-6	True	ATTAAA	-33	NA	45895848	45879487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892465_45894414
ES.34936.74	chr9	-	1473	7	NNC	ENSMUSG00000003131.8	novel	6873	6	NA	NA	7	477	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	171.694253446837	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGGAGATGCTATAGT	4146	False	NA	-23	True	ATTAAA	-16	NA	45896115	45879504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45892340_45892523_45896002
ES.34936.75	chr9	-	1000	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	216	5657	0	168	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGCCAAGGAAGAT	4128	False	NA	NA	False	TATAAA	-19	NA	45896133	45879813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ES.34936.9	chr9	-	4345	27	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	40.2004776385414	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTGGGAGGTGCAGGA	NA	False	NA	-15	True	AATAAA	-33	NA	45866585	45849155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45858996_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ES.34937.1	chr9	-	210	1	Intergenic	novelGene_28352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAGTAAGGAAATCAAT	3795	False	NA	17	True	NA	NA	NA	45903792	45903582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45903600_45903800
ES.34938.1	chr9	+	183	1	Intergenic	novelGene_28353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGGGTCTCAGTGCT	6977	False	NA	NA	False	NA	NA	NA	45913946	45914129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45913900_45914100
ES.34939.1	chr9	+	2449	14	NNC	ENSMUSG00000034135.16	novel	2330	13	NA	NA	-4169	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.2321315957168	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGGGTGTTTTTATC	NA	False	NA	16	True	AATAAA	-24	NA	45919948	46114193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45920038_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ES.34939.11	chr9	+	4356	21	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	10	10962	10	-8002	5prime_fragment	FALSE	canonical	3	33	junction_17	29.2755870991514	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTGTTTGCATAGC	NA	False	NA	NA	False	GGGGCT	-37	NA	45924127	46124530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967
ES.34939.13	chr9	+	4221	24	FSM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-28	-13	16	13	multi-exon	FALSE	canonical	2	8	junction_14	29.7947610878116	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCATGAGCCAGCATC	NA	False	NA	14	True	AATAAA	-20	NA	45924133	46133586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.14	chr9	+	6121	24	FSM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-26	-1915	18	2	multi-exon	FALSE	canonical	2	8	junction_14	29.7947610878116	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATATGTTGTTTGCCTTA	NA	False	NA	19	True	AATAAA	-21	NA	45924135	46135488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.15	chr9	+	7092	24	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	19	10	19	-4	intron_retention	FALSE	canonical	3	33	junction_17	28.5450593952617	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACGCTGATATGTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	45924136	46135482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364
ES.34939.16	chr9	+	2997	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-24	19034	20	356	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCGTCCTACTGGTGTC	NA	False	NA	NA	False	GATAAA	-12	NA	45924137	46114539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ES.34939.17	chr9	+	1850	13	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-24	23473	20	-4083	5prime_fragment	FALSE	canonical	3	79	junction_9	9.93695403811226	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGCATCCTGTGTTTT	NA	False	NA	NA	False	AATAAA	-38	NA	45924137	46110100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849
ES.34939.18	chr9	+	5084	24	FSM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-17	-887	-17	887	multi-exon	FALSE	canonical	2	8	junction_14	29.7947610878116	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATGTTTAACCAGATT	NA	False	NA	NA	False	AAAAAG	-23	NA	45924144	46134460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.19	chr9	+	5221	25	NNC	ENSMUSG00000034135.16	novel	6287	25	NA	NA	-16	883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	31.5244338657422	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAATGTTTAACCA	NA	False	NA	NA	False	AAAAAG	-19	NA	45924145	46134456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130725_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.2	chr9	+	6496	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	-210	1	-210	-1	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTTGCCTTACGG	NA	False	NA	22	True	AATAAA	-24	NA	45923907	46135491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.20	chr9	+	3288	21	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	28	12012	-16	-9052	5prime_fragment	FALSE	canonical	3	33	junction_17	29.2755870991514	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATCAAAATGCTGACT	NA	False	NA	NA	False	NA	NA	NA	45924145	46123480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967
ES.34939.21	chr9	+	6144	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	29	114	-15	-108	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAGTTGCTAAGAGCTT	NA	False	NA	-91	True	NA	NA	NA	45924146	46135378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.22	chr9	+	2613	14	NNC	ENSMUSG00000034135.16	novel	4180	24	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	28.2321315957168	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTCATGGGCTCTCG	NA	False	NA	-7	True	AATAAA	-1	NA	45924146	46114170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109855_46110006_46113297
ES.34939.24	chr9	+	6093	24	NNC	ENSMUSG00000034135.16	novel	4180	24	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5252231224578	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGATATGTTGTTTGC	NA	False	NA	15	True	AATAAA	-17	NA	45924147	46135484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107167_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120955_46121773_46122114_46122967_46123861_46130725_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.26	chr9	+	2607	1	Intergenic	novelGene_28357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45981509	45984116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_45981500_45984100
ES.34939.27	chr9	+	5995	22	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	142347	12	-212	-6	3prime_fragment	FALSE	canonical	3	33	junction_14	27.8924887685774	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACGCTGATATGTTGT	NA	False	NA	11	True	AATAAA	-13	NA	46066464	46135480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.28	chr9	+	157	1	Intergenic	novelGene_28358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	46069451	46069608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_46069500_46069600
ES.34939.29	chr9	+	1886	9	ISM	ENSMUSG00000034135.16	ENSMUST00000153152.2	5465	21	23052	21300	23052	3	internal_fragment	FALSE	canonical	3	79	junction_4	10.9822299648113	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGGAAACTGTGGGTGT	5844	False	NA	9	True	AATAAA	-17	NA	46089728	46114186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ES.34939.3	chr9	+	2871	14	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	-244	19380	-200	10	5prime_fragment	FALSE	canonical	3	79	junction_9	9.59474708356782	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGGGTGTTTTTATC	NA	False	NA	16	True	AATAAA	-24	NA	45923917	46114193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ES.34939.30	chr9	+	4951	10	ISM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	194439	9	-12312	-3	3prime_fragment	FALSE	canonical	3	33	junction_2	9.02807691812083	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGCTGATATGTTGTTTG	NA	False	NA	14	True	AATAAA	-16	NA	46118556	46135483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.31	chr9	+	4897	9	NIC	ENSMUSG00000034135.16	novel	5465	21	NA	NA	-11635	0	intron_retention	FALSE	canonical	3	33	junction_2	8.77496438739212	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGATATGTTGTTTGCCT	213	False	NA	17	True	AATAAA	-19	NA	46119233	46135486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46131641_46132364_46132533_46133366
ES.34939.32	chr9	+	4076	9	ISM	ENSMUSG00000034135.16	ENSMUST00000153152.2	5465	21	53224	-1	-10968	1	3prime_fragment	FALSE	canonical	0	0	junction_4	19.2219763552034	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATATGTTGTTTGCCTT	880	False	NA	18	True	AATAAA	-20	NA	46119900	46135487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46123147_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.33	chr9	+	2013	2	ISM	ENSMUSG00000034135.16	ENSMUST00000120463.9	4180	24	197496	9049	-9211	-8008	internal_fragment	FALSE	canonical	3	47	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGTGAGTTTTGTTTG	2637	False	NA	NA	False	GGGGCT	-31	NA	46121657	46124524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46122114_46122967
ES.34939.34	chr9	+	3652	1	Intergenic	novelGene_28361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGATT	2994	False	NA	NA	False	NA	NA	NA	46126280	46129932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_46126300_46129900
ES.34939.4	chr9	+	4488	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	-105	1904	-105	15	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATGAGCCAGCATCTG	NA	False	NA	16	True	AATAAA	-22	NA	45924012	46133588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.6	chr9	+	2110	12	NIC	ENSMUSG00000034135.16	novel	4180	24	NA	NA	-67	-369	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	29.7696389793138	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTGTTTGCTGTGTGTT	NA	False	NA	NA	False	AATGAA	-16	NA	45924050	46113814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ES.34939.8	chr9	+	4889	23	NIC	ENSMUSG00000034135.16	novel	4180	24	NA	NA	-7	13	intron_retention	FALSE	canonical	2	8	junction_14	29.7289407371903	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCATGAGCCAGCATC	NA	False	NA	14	True	AATAAA	-20	NA	45924110	46133586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46119219_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.34939.9	chr9	+	5120	16	NNC	ENSMUSG00000034135.16	novel	6287	25	NA	NA	-3	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.172800121157	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCTTTTGTCCTTGTT	NA	False	NA	-80	True	NA	NA	NA	45924114	46135389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_45924432_46107307_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ES.3494.1	chr10	-	320	1	Intergenic	novelGene_2682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	85379126	85378806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_85378800_85379100
ES.3494.2	chr10	-	176	1	Intergenic	novelGene_2683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCGAAGCAAGCGGGTC	NA	False	NA	NA	False	NA	NA	NA	85379129	85378953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_85379000_85379100
ES.34940.1	chr9	-	179	1	Intergenic	novelGene_28354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGTAAATAAATAA	9591	False	NA	NA	False	NA	NA	NA	45935587	45935408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45935400_45935600
ES.34941.1	chr9	-	171	1	Intergenic	novelGene_28355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTGGGAATGGGT	-3	True	NA	NA	False	NA	NA	NA	45945797	45945626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45945600_45945800
ES.34942.1	chr9	-	136	1	Intergenic	novelGene_28356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAACAA	7107	False	NA	NA	False	NA	NA	NA	45948178	45948042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_45948000_45948200
ES.34943.1	chr9	-	5763	1	Intergenic	novelGene_28359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCATGAGCAGTCACCC	NA	False	NA	NA	False	NA	NA	NA	46075666	46069903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46069900_46075700
ES.34944.1	chr9	-	162	1	Intergenic	novelGene_28360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	46088675	46088513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46088500_46088700
ES.34945.1	chr9	-	7960	1	Antisense	novelGene_ENSMUSG00000034135.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	46119270	46111310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_46111300_46119300
ES.34946.1	chr9	+	176	1	Intergenic	novelGene_28362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGATCTTATACT	NA	False	NA	NA	False	NA	NA	NA	46166963	46167139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_46167000_46167100
ES.34947.1	chr9	-	166	1	Intergenic	novelGene_28363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATAAATAATT	NA	False	NA	NA	False	NA	NA	NA	46184054	46183888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46183900_46184100
ES.34948.1	chr9	+	1951	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	-7	1040	-7	119	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCCTCTGCGTTCATGT	NA	False	NA	13	True	ATTAAA	-20	NA	46184354	46192901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.10	chr9	+	3104	11	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-27	119	intron_retention	FALSE	canonical	3	619	junction_5	54.1013863038647	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCCTCTGCGTTCATGT	NA	False	NA	13	True	ATTAAA	-20	NA	46184463	46192901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.11	chr9	+	1948	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-27	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	198.38445133766	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184463	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187885_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.13	chr9	+	3828	10	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-26	117	intron_retention	FALSE	canonical	3	619	junction_5	48.4457186376772	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184464	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46186026_46186661_46187152_46187497_46187546_46187709_46187777_46188089_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.14	chr9	+	3178	10	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-26	117	intron_retention	FALSE	canonical	3	657	junction_3	50.0372700600435	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184464	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184938_46185353_46185445_46185954_46187152_46187497_46187546_46187709_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.15	chr9	+	4138	11	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	657	junction_6	43.1352524045009	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTTGGTACAGCGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	46184464	46193938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.16	chr9	+	2475	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-26	117	intron_retention	FALSE	canonical	3	619	junction_7	52.7680985276353	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184464	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.19	chr9	+	1882	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-25	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	197.390221156682	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184465	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191169_46191280_46192335
ES.34948.2	chr9	+	4293	12	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-40	-3	intron_retention	FALSE	canonical	0	0	junction_8	281.611214324035	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTTGGTACAGCGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	46184450	46193938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46189275_46189601_46189713_46190966_46191054_46191149_46191280_46192335
ES.34948.20	chr9	+	2980	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	198.38445133766	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACGTTTGGTACAGCGT	NA	False	NA	NA	False	AATAAA	-13	NA	46184468	46193936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187885_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.21	chr9	+	3513	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-22	0	intron_retention	FALSE	canonical	3	619	junction_7	52.7680985276353	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184468	46193941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.22	chr9	+	1941	13	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-22	117	intron_retention	FALSE	canonical	2	31	junction_3	196.041803931939	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184468	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184938_46185353_46185445_46185954_46186026_46186665_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.23	chr9	+	4885	10	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-22	-4	intron_retention	FALSE	canonical	3	657	junction_4	50.3420399631791	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTTTGGTACAGCGTC	NA	False	NA	NA	False	AATAAA	-14	NA	46184468	46193937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46187152_46187497_46187546_46187709_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.25	chr9	+	2930	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-20	-9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	196.359801379084	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAAACGTTTGGTACA	NA	False	NA	NA	False	AATAAA	-9	NA	46184470	46193932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191149_46191280_46192335
ES.34948.26	chr9	+	6005	14	FSM	ENSMUSG00000032078.18_ENSMUSG00000032077.6	ENSMUST00000156440.8	2984	14	110	-3131	-19	3131	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	46184471	46197072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.27	chr9	+	3250	12	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-19	116	intron_retention	FALSE	canonical	3	619	junction_7	55.1054586247854	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCCGCCTCTGCGTTCA	NA	False	NA	10	True	ATTAAA	-17	NA	46184471	46192898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.28	chr9	+	2929	12	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-19	118	intron_retention	FALSE	canonical	3	657	junction_6	45.9782557302906	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCGCCTCTGCGTTCATG	NA	False	NA	12	True	ATTAAA	-19	NA	46184471	46192900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.29	chr9	+	3751	13	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_8	205.96776986272	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184485	46193941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187885_46188089_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.3	chr9	+	4048	14	Fusion	ENSMUSG00000032078.18_ENSMUSG00000032077.6	novel	2984	14	NA	NA	-40	1149	multi-exon	FALSE	canonical	0	0	junction_9	198.30611087273	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAGATGTGCTGAGACA	NA	False	NA	NA	False	ATTAAA	-19	NA	46184450	46195090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188165_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.30	chr9	+	1807	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	0	117	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	194.961747120395	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184490	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188949_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.31	chr9	+	3162	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	2	-4	intron_retention	FALSE	canonical	3	657	junction_6	44.0763226939615	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTTTGGTACAGCGTC	NA	False	NA	NA	False	AATAAA	-14	NA	46184492	46193937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.32	chr9	+	1684	11	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	1296	1040	728	119	3prime_fragment	FALSE	canonical	3	619	junction_5	45.9395254655509	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCCTCTGCGTTCATGT	NA	False	NA	13	True	ATTAAA	-20	NA	46185657	46192901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.33	chr9	+	1952	9	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-451	117	intron_retention	FALSE	canonical	3	619	junction_3	47.0684342208236	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46186303	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.34	chr9	+	2287	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	-10	262	-10	65	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTATTGAGTGATTGCAG	NA	False	NA	110	True	NA	NA	NA	46194295	46210146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ES.34948.35	chr9	+	3268	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	1	-730	1	730	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTTTTTCTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	46194306	46211138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ES.34948.36	chr9	+	7922	10	NNC	ENSMUSG00000032077.6	novel	2539	10	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	40.6587727614735	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTTCCTAACTGGGTA	NA	False	NA	43	True	AATAAA	-20	NA	46194314	46210079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46205030_46205193
ES.34948.37	chr9	+	2045	5	FSM	ENSMUSG00000032077.6	ENSMUST00000213932.2	978	5	-7	-1060	-7	878	multi-exon	FALSE	canonical	1	5	junction_1	58.1780671731195	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGCTTGTACACACTTT	5550	False	NA	NA	False	NA	NA	NA	46202638	46211286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46202709_46202997_46203132_46203363_46203549_46203745_46203828_46209712
ES.34948.4	chr9	+	2168	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-40	119	intron_retention	FALSE	canonical	3	657	junction_6	44.0763226939615	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCCTCTGCGTTCATGT	NA	False	NA	13	True	ATTAAA	-20	NA	46184450	46192901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.5	chr9	+	2894	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	90	0	-39	0	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184451	46193941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.6	chr9	+	4119	10	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-39	117	intron_retention	FALSE	canonical	3	619	junction_6	59.2004337655113	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184451	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46187152_46187497_46187546_46187709_46187777_46188089_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.7	chr9	+	2090	14	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-38	115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	197.46017499754	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACACCCGCCTCTGCGTTC	NA	False	NA	9	True	ATTAAA	-16	NA	46184452	46192897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189275_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.8	chr9	+	2914	13	NNC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	203.808324985348	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACGTTTGGTACAGCGT	NA	False	NA	NA	False	AATAAA	-13	NA	46184463	46193936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187885_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34948.9	chr9	+	3572	11	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	-27	117	intron_retention	FALSE	canonical	3	657	junction_5	47.8916485412645	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184463	46192899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186749_46187028_46187152_46187497_46187546_46187709_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ES.34949.1	chr9	-	929	1	Antisense	novelGene_ENSMUSG00000032078.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	46192900	46191971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_46192000_46192900
ES.3495.1	chr10	+	187	1	Intergenic	novelGene_2684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGAGTTGCACA	NA	False	NA	NA	False	NA	NA	NA	85513960	85514147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_85514000_85514100
ES.34950.1	chr9	-	173	1	Intergenic	novelGene_28364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46200720	46200547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46200500_46200700
ES.34951.1	chr9	-	175	1	Intergenic	novelGene_28365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGCCCATTTCTTTAA	8428	False	NA	NA	False	NA	NA	NA	46222034	46221859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46221900_46222000
ES.34952.1	chr9	-	2308	1	FSM	ENSMUSG00000097463.3	ENSMUST00000217385.2	1782	1	-528	2	-17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTTCTCAGTTCCA	2721	False	NA	NA	False	GATAAA	-15	NA	46240728	46238420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_46238400_46240700
ES.34952.2	chr9	-	2089	1	FSM	ENSMUSG00000097463.3	ENSMUST00000217385.2	1782	1	-512	205	-1	-205	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTGTGTGTATACCA	2737	False	NA	NA	False	AAAACA	-33	NA	46240712	46238623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_46238600_46240700
ES.34953.1	chr9	+	2438	1	Intergenic	novelGene_28366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGTGTCTCCGTGT	4837	False	NA	NA	False	ATTAAA	-16	NA	46278011	46280449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_46278000_46280400
ES.34954.1	chr9	-	174	1	Intergenic	novelGene_28367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACAACAAATGT	NA	False	NA	NA	False	NA	NA	NA	46278514	46278340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46278300_46278500
ES.34955.1	chr9	+	2210	1	Genic_Genomic	ENSMUSG00000110864.2	novel	NA	NA	NA	NA	41023	1252	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCTGTTCTGTAGA	3018	False	NA	NA	False	NA	NA	NA	46295095	46297305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_46295100_46297300
ES.34956.1	chr9	-	2938	4	Intergenic	novelGene_28368	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	46558711	46546336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46548878_46549738_46549956_46553169_46553240_46558601
ES.34957.1	chr9	-	186	1	Intergenic	novelGene_28369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAATTTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	46767966	46767780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_46767800_46768000
ES.34958.1	chr9	-	180	1	Intergenic	novelGene_28370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATCCCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	47293637	47293457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47293500_47293600
ES.34959.1	chr9	-	158	1	Intergenic	novelGene_28371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	47331896	47331738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47331700_47331900
ES.3496.1	chr10	+	158	1	Intergenic	novelGene_2685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	85557954	85558112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_85558000_85558100
ES.34960.1	chr9	-	6113	3	Intergenic	novelGene_28372	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTTGTTTGTTCGTTT	NA	False	NA	NA	False	NA	NA	NA	47423960	47410951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47416709_47418021_47418212_47423794
ES.34961.1	chr9	+	184	1	Intergenic	novelGene_28373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	47435937	47436121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_47435900_47436100
ES.34962.1	chr9	+	2165	11	NNC	ENSMUSG00000032076.21	novel	4444	10	NA	NA	-3	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.438529583862	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAACACTGAAAACTC	NA	False	NA	NA	False	NA	NA	NA	47441646	47762364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47441804_47600068_47600196_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.10	chr9	+	1344	10	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	99271	-4895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.369945490416	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTACGCTGAGTCTTGTC	317	False	NA	NA	False	AATAGA	-39	NA	47540941	47740851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47541004_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
ES.34962.11	chr9	+	2060	11	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	99271	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.536712942702	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	317	False	NA	NA	False	NA	NA	NA	47540941	47762330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47541004_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.12	chr9	+	1517	12	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	99273	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.768579538771	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTCGAGAAGCTCGTGT	319	False	NA	32	True	GATAAA	-17	NA	47540943	47761756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47541004_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ES.34962.13	chr9	+	1501	10	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	99273	987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	150.731631356388	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGAGTCTTGTCTGTTT	319	False	NA	NA	False	NA	NA	NA	47540943	47731365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47541004_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47731029
ES.34962.14	chr9	+	1919	9	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	173239	-4726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.491031029406	270	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAAATGTAAAGTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	47614909	47741020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47615529_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674
ES.34962.15	chr9	+	6136	9	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	253423	2350	253307	1	3prime_fragment	FALSE	canonical	3	143	junction_7	61.313614923604	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAGAA	1707	False	NA	NA	False	NA	NA	NA	47694977	47762328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.16	chr9	+	3281	6	ISM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	256546	-1250	256546	1250	3prime_fragment	FALSE	canonical	3	300	junction_1	18.4780951399218	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGGCAAACGTCTAGTC	796	False	NA	NA	False	ATTAAA	-19	NA	47698216	47726602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
ES.34962.17	chr9	+	1437	6	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	269113	2322	268997	29	3prime_fragment	FALSE	canonical	3	143	junction_4	70.5934841185785	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAGAAAACACT	1768	False	NA	NA	False	NA	NA	NA	47710667	47762356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.18	chr9	+	3970	1	NIC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	279718	6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGGTCTCCTTCAGGA	8605	False	NA	NA	False	NA	NA	NA	47721388	47725358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_47721400_47725400
ES.34962.19	chr9	+	3551	6	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	279864	-2348	279748	-3	3prime_fragment	FALSE	canonical	3	105	junction_4	88.2215393200549	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGATCCTTTAAATCT	8635	False	NA	9	True	AATAAA	-13	NA	47721418	47764675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ES.34962.2	chr9	+	1510	12	NNC	ENSMUSG00000032076.21	novel	1784	12	NA	NA	2	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.567183453465	281	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTCGAGAAGCTCGTG	NA	False	NA	31	True	GATAAA	-16	NA	47441651	47761755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47441804_47612004_47612058_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ES.34962.20	chr9	+	1417	1	Intergenic	novelGene_28381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAAATGTGTGAATAT	11	False	NA	NA	False	AATAAA	-17	NA	47722033	47723450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_47722000_47723400
ES.34962.21	chr9	+	5578	3	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	294465	0	294349	0	3prime_fragment	FALSE	canonical	3	105	junction_1	102	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47736019	47762327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47740708_47759464_47759597_47761569
ES.34962.22	chr9	+	4158	2	ISM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	314642	0	314526	0	3prime_fragment	FALSE	canonical	3	309	junction_1	0	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47756196	47762327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47759597_47761569
ES.34962.23	chr9	+	6194	2	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	314954	3	314838	-3	3prime_fragment	FALSE	canonical	3	309	junction_1	0	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGATCCTTTAAATCT	NA	False	NA	9	True	AATAAA	-13	NA	47756508	47764675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_47759597_47761569
ES.34962.24	chr9	+	4385	1	NIC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	318622	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATCCTTTAAATCTCT	NA	False	NA	11	True	AATAAA	-15	NA	47760292	47764677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_47760300_47764700
ES.34962.3	chr9	+	2102	12	NNC	ENSMUSG00000032076.21	novel	2126	11	NA	NA	-5	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.567183453465	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAGAAAACACT	NA	False	NA	NA	False	NA	NA	NA	47441655	47762356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47441804_47612009_47612058_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ES.34962.4	chr9	+	2049	11	NNC	ENSMUSG00000032076.21	novel	2126	11	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.438529583862	284	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47441657	47762325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47441804_47628178_47628240_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.5	chr9	+	4134	1	Intergenic	novelGene_28375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAACAGAATGCTTGC	NA	False	NA	NA	False	NA	NA	NA	47459835	47463969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_47459800_47464000
ES.34962.6	chr9	+	1788	11	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	41242	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.438529583862	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTCTGCTGTTTGACAC	NA	False	NA	1	True	AAAACA	-19	NA	47482912	47761883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47483150_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.7	chr9	+	4523	11	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	41288	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	130.438529583862	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTAAATCTCTTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	47482958	47764682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47483159_47545250_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.8	chr9	+	2183	11	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	41291	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.438529583862	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47482961	47762327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47483150_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ES.34962.9	chr9	+	2219	12	NNC	ENSMUSG00000032076.21	novel	4482	10	NA	NA	41291	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.567183453465	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	47482961	47762330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_47483150_47545223_47545375_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ES.34963.1	chr9	-	2691	1	Intergenic	novelGene_28374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACGACTGTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	47453430	47450739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47450700_47453400
ES.34964.1	chr9	-	3401	1	Intergenic	novelGene_28376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGACATCCTTTATCC	NA	False	NA	NA	False	AAGAAA	-17	NA	47519252	47515851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47515900_47519300
ES.34965.1	chr9	-	3478	1	Intergenic	novelGene_28377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47606882	47603404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47603400_47606900
ES.34966.1	chr9	-	4847	1	Intergenic	novelGene_28378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGGTGCACGCCTT	NA	False	NA	NA	False	NA	NA	NA	47613536	47608689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47608700_47613500
ES.34966.2	chr9	-	2226	1	Intergenic	novelGene_28379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAAACCAAACTG	NA	False	NA	NA	False	NA	NA	NA	47613536	47611310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47611300_47613500
ES.34967.1	chr9	-	791	1	Intergenic	novelGene_28380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGAAACTCAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	47620963	47620172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_47620200_47621000
ES.34968.1	chr9	-	3178	1	Antisense	novelGene_ENSMUSG00000032076.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAGAAAA	NA	False	NA	NA	False	ATTAAA	-44	NA	47731838	47728660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_47728700_47731800
ES.34969.1	chr9	-	181	1	Antisense	novelGene_ENSMUSG00000111117.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTTCTTCCCTATG	NA	False	NA	NA	False	NA	NA	NA	47980510	47980329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_47980300_47980500
ES.3497.1	chr10	+	2591	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	-8	-11	-8	11	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGACTTCACTCTTATT	NA	False	NA	19	True	AATAAA	-30	NA	85707686	85724971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.12	chr10	+	2455	14	NNC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	-21	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	84.034932156129	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACTTTGACTTCACTC	NA	False	NA	14	True	AATAAA	-25	NA	85707726	85724966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723878
ES.3497.13	chr10	+	2327	13	NIC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	86.4026025199601	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACCTCACTTTGACT	NA	False	NA	8	True	AATAAA	-19	NA	85707726	85724960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85723086_85723193_85723893
ES.3497.15	chr10	+	2820	15	NNC	ENSMUSG00000001785.14	novel	715	8	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.8243826242321	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACCTCACTTTGACT	NA	False	NA	8	True	AATAAA	-19	NA	85707951	85724960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85708384_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.16	chr10	+	2997	12	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	2651	0	-1772	0	intron_retention	FALSE	canonical	3	285	junction_6	17.5334391265178	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACCTCACTTTGACT	NA	False	NA	8	True	AATAAA	-19	NA	85710345	85724960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086
ES.3497.17	chr10	+	5677	5	NIC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	2489	-169	intron_retention	FALSE	canonical	3	285	junction_1	25.0199920063936	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGCCTTCTGGACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	85714606	85724791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85715756_85717866_85717964_85718734_85718797_85720326_85721565_85721660
ES.3497.18	chr10	+	2015	9	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	7485	-219	3062	219	3prime_fragment	FALSE	canonical	3	285	junction_2	20.1738537468675	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTACCCTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	85715179	85725179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.19	chr10	+	1493	7	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	10168	168	5745	-168	3prime_fragment	FALSE	canonical	3	287	junction_2	19.0416210794494	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCCTTCTGGACTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	85717862	85724792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.2	chr10	+	2412	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	-8	168	-8	-168	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCCTTCTGGACTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	85707686	85724792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.3	chr10	+	1895	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	1	676	1	-676	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACGGGTCTTGCTGTG	NA	False	NA	76	True	CATAAA	-23	NA	85707695	85724284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.7	chr10	+	3265	14	NNC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	18	3	intron_retention	FALSE	non_canonical	0	0	junction_3	84.034932156129	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTCACTTTGACTTCA	NA	False	NA	11	True	AATAAA	-22	NA	85707712	85724963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85707879_85710141_85710201_85710312_85710498_85712154_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086
ES.3497.8	chr10	+	3592	14	NIC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	18	3	intron_retention	FALSE	canonical	3	284	junction_1	19.0188321495133	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTCACTTTGACTTCA	NA	False	NA	11	True	AATAAA	-22	NA	85707712	85724963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85721565_85721660_85721783_85723086_85723193_85723893
ES.3497.9	chr10	+	4047	14	NIC	ENSMUSG00000001785.14	novel	2572	15	NA	NA	18	-171	intron_retention	FALSE	canonical	3	284	junction_1	19.0045151906892	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAAAGCCTTCTGGACT	NA	False	NA	NA	False	AATAAA	-16	NA	85707712	85724789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85707879_85710141_85710201_85710312_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ES.34970.1	chr9	+	3121	10	NIC	ENSMUSG00000044229.10	novel	2875	11	NA	NA	0	30	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	1.39664500999739	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGATTTTACTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	48073320	48311233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48073558_48266286_48266388_48287172_48287205_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307786_48307994_48309834
ES.34970.10	chr9	+	176	1	Intergenic	novelGene_28385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48220470	48220646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48220500_48220600
ES.34970.2	chr9	+	3439	11	NNC	ENSMUSG00000044229.10	novel	2875	11	NA	NA	17	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.73493515728975	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCCTTTTTGTGTTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	48073337	48311315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48073558_48144510_48144583_48266286_48266388_48287172_48287368_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307789_48307994_48309813
ES.34970.3	chr9	+	5394	11	NNC	ENSMUSG00000044229.10	novel	2875	11	NA	NA	17	-10	intron_retention	FALSE	canonical	0	0	junction_1	1.6	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCCTTTTTGTGTTTGT	NA	False	NA	NA	False	TATAAA	-13	NA	48073337	48311315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48073558_48266286_48266388_48272726_48272815_48273359_48273476_48287172_48287368_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307786
ES.34970.4	chr9	+	3347	10	NIC	ENSMUSG00000044229.10	novel	2875	11	NA	NA	25	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.74977952755818	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGTTTGTTGTTTG	NA	False	NA	NA	False	TATAAA	-19	NA	48073345	48311321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48073558_48266286_48266388_48287172_48287368_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307786_48307994_48309834
ES.34970.5	chr9	+	3415	11	NIC	ENSMUSG00000044229.10	novel	2875	11	NA	NA	29	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.78885438199983	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGTTTGTTGTTTG	NA	False	NA	NA	False	TATAAA	-19	NA	48073349	48311321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48073558_48144510_48144583_48266286_48266388_48287172_48287368_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307786_48307994_48309834
ES.34970.6	chr9	+	1376	1	Intergenic	novelGene_28382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCCATGCTTACTTGAA	NA	False	NA	NA	False	NA	NA	NA	48082052	48083428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48082100_48083400
ES.34970.7	chr9	+	3914	2	Intergenic	novelGene_28383	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCCTCATAATTCTAT	NA	False	NA	NA	False	AATAAA	-15	NA	48134396	48140948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48134475_48137112
ES.34970.8	chr9	+	3061	9	NIC	ENSMUSG00000044229.10	novel	4871	9	NA	NA	71143	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.73205080756888	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGTTTGTTGTTTG	NA	False	NA	NA	False	TATAAA	-19	NA	48144555	48311321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48144583_48287172_48287368_48300171_48300315_48300692_48300796_48301549_48301653_48304007_48304742_48305438_48305501_48307786_48307994_48309834
ES.34970.9	chr9	+	563	1	Intergenic	novelGene_28384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATGCTGGTGCAATAA	NA	False	NA	NA	False	NA	NA	NA	48191975	48192538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48192000_48192500
ES.34971.1	chr9	+	200	1	Intergenic	novelGene_28386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	48373512	48373712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48373500_48373700
ES.34972.1	chr9	-	7076	4	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1158	junction_1	25.8499946271217	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391931	48379811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48380247_48383119_48383174_48384331_48390694_48391706
ES.34972.11	chr9	-	6947	3	FSM	ENSMUSG00000032026.8	ENSMUST00000214161.2	553	3	8	-6402	5	-2	multi-exon	FALSE	canonical	3	1141	junction_1	21.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391885	48379813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48386498_48390609_48390694_48391706
ES.34972.12	chr9	-	3868	2	NNC	ENSMUSG00000032026.8	novel	462	2	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCCTTCGGCACCCTCT	NA	False	NA	-5	True	AATAAA	-22	NA	48391892	48379815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_48382844_48391052
ES.34972.13	chr9	-	1047	7	NNC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	426.238880597879	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAACCCTTCGGCACCCTC	NA	False	NA	-6	True	AATAAA	-21	NA	48391893	48379816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390687_48391706
ES.34972.14	chr9	-	904	7	NNC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	431.221295340983	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAACCCTTCGGCACC	NA	False	NA	-9	True	AATAAA	-18	NA	48391878	48379819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_48380247_48383119_48383174_48384331_48384368_48385760_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.15	chr9	-	1404	4	FSM	ENSMUSG00000032026.8	ENSMUST00000216624.2	693	4	-4	-707	1	10	multi-exon	FALSE	canonical	3	1058	junction_1	52.2961651451508	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTAGTGTTAGTAG	NA	False	NA	0	True	AATAAA	-25	NA	48391910	48384775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.16	chr9	-	2001	3	FSM	ENSMUSG00000032026.8	ENSMUST00000214161.2	553	3	-8	-1440	5	10	multi-exon	FALSE	canonical	3	1141	junction_1	21.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTAGTGTTAGTAG	NA	False	NA	0	True	AATAAA	-25	NA	48391901	48384775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48386498_48390609_48390694_48391706
ES.34972.17	chr9	-	1296	5	FSM	ENSMUSG00000032026.8	ENSMUST00000217037.2	609	5	-2	-685	1	10	multi-exon	FALSE	canonical	2	5	junction_1	488.234062719921	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTTAGTGTTAGTAG	NA	False	NA	0	True	AATAAA	-25	NA	48391892	48384775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48385671_48385760_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.18	chr9	-	1793	4	FSM	ENSMUSG00000032026.8	ENSMUST00000213508.2	1780	4	1	-14	1	9	multi-exon	FALSE	canonical	3	46	junction_1	526.615820330364	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTTTAGTGTTAGTA	NA	False	NA	-1	True	AATAAA	-24	NA	48391914	48384776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48386200_48386419_48386498_48390609_48390694_48391706
ES.34972.19	chr9	-	635	5	NIC	ENSMUSG00000032026.8	novel	693	4	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	484.35388663662	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGTTAAAGTTTTTAGT	NA	False	NA	-8	True	AATAAA	-17	NA	48391929	48384783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48384922_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.2	chr9	-	3931	6	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	1058	junction_3	57.8584479570615	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391892	48379811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.3	chr9	-	6372	4	FSM	ENSMUSG00000032026.8	ENSMUST00000216624.2	693	4	-8	-5671	1	0	multi-exon	FALSE	canonical	3	1058	junction_1	52.2961651451508	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391914	48379811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.4	chr9	-	1182	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	-106	1	-94	-1	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCGGCACCCTCTGCT	NA	False	NA	-2	True	AATAAA	-25	NA	48392017	48379812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.5	chr9	-	2942	5	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1141	junction_3	30.1579177000004	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCGGCACCCTCTGCT	NA	False	NA	-2	True	AATAAA	-25	NA	48391910	48379812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48380247_48383119_48383174_48384331_48386498_48390609_48390694_48391706
ES.34972.6	chr9	-	968	6	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	453.918671129532	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391888	48379813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48391706
ES.34972.7	chr9	-	1696	6	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	1101	junction_3	40.3435248831829	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391926	48379813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48386498_48390609_48390694_48391706
ES.34972.8	chr9	-	2368	6	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	1058	junction_3	54.3639586490903	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391943	48379813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48380247_48383119_48383174_48384331_48385814_48386419_48386498_48390609_48390694_48391706
ES.34972.9	chr9	-	2542	3	NNC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	592	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCGGCACCCTCTGC	NA	False	NA	-3	True	AATAAA	-24	NA	48391893	48379813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_48382124_48390648_48390694_48391706
ES.34973.1	chr9	+	176	1	Intergenic	novelGene_28388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCACAACTCAA	5549	False	NA	NA	False	NA	NA	NA	48395602	48395778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48395600_48395800
ES.34974.1	chr9	-	2660	1	Intergenic	novelGene_28387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGCAGTGTGTATGTG	NA	False	NA	NA	False	AATAAA	-13	NA	48396113	48393453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48393500_48396100
ES.34975.1	chr9	+	1967	1	Intergenic	novelGene_28389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCAATTGAGG	7700	False	NA	NA	False	NA	NA	NA	48397753	48399720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48397800_48399700
ES.34976.1	chr9	+	1319	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	-97	-691	-97	691	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGACTCCAATTTTTTT	2686	False	NA	NA	False	NA	NA	NA	48406644	48407963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48406600_48408000
ES.34976.2	chr9	+	559	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	-29	1	-29	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTGGTGTGACGGCAG	2754	False	NA	13	True	NA	NA	NA	48406712	48407271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48406700_48407300
ES.34977.1	chr9	-	4758	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-9	-2976	-7	2976	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGAGTGCTAGCATATT	NA	False	NA	NA	False	TATAAA	-18	NA	48406606	48397024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ES.34977.10	chr9	-	5244	3	NIC	ENSMUSG00000042396.11	novel	1867	6	NA	NA	-34	2	intron_retention	FALSE	canonical	3	400	junction_2	2.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406633	48400006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48401289_48402147_48404795_48405318
ES.34977.13	chr9	-	876	6	NNC	ENSMUSG00000042396.11	novel	1867	6	NA	NA	6	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.252623297813	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCATCTGCTTATTAAT	NA	False	NA	-6	True	AATAAA	-18	NA	48406588	48400484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_48400832_48401235_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ES.34977.14	chr9	-	1270	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	6	497	3	-489	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAACTTTTCAGTCA	NA	False	NA	-19	True	AATAAA	-5	NA	48406591	48400497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ES.34977.16	chr9	-	2280	2	ISM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-62	3844	-57	44	intron_retention	FALSE	canonical	3	400	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGAAAATTGAACAC	NA	False	NA	NA	False	NA	NA	NA	48406656	48403852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_48404795_48405318
ES.34977.17	chr9	-	2789	1	FSM	ENSMUSG00000042396.11	ENSMUST00000213525.2	2703	1	-42	-44	-42	44	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGAAAATTGAACAC	NA	False	NA	NA	False	NA	NA	NA	48406641	48403852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48403900_48406600
ES.34977.2	chr9	-	1835	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	-62	0	-60	0	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTCTCTTTATTTT	NA	False	NA	-4	True	ATTAAA	-12	NA	48406659	48400000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ES.34977.4	chr9	-	2802	4	ISM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-65	-2	-60	2	intron_retention	FALSE	canonical	3	400	junction_3	16.8588914885357	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406659	48400006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318
ES.34977.6	chr9	-	6605	1	FSM	ENSMUSG00000042396.11	ENSMUST00000213525.2	2703	1	-12	-3890	-12	2	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406611	48400006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48400000_48406600
ES.34977.7	chr9	-	1934	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	-65	-2	-60	2	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406659	48400006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
ES.34977.9	chr9	-	4437	4	NIC	ENSMUSG00000042396.11	novel	1867	6	NA	NA	1	2	intron_retention	FALSE	canonical	3	96	junction_3	144.49990388309	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGAATGTGTCTCTT	NA	False	NA	-10	True	ATTAAA	-6	NA	48406593	48400006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_48401289_48402147_48404795_48405318_48405688_48406454
ES.34978.1	chr9	-	171	1	Intergenic	novelGene_28390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTGGA	NA	False	NA	NA	False	NA	NA	NA	48408162	48407991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48408000_48408200
ES.34979.1	chr9	-	1002	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	29	12	29	2	multi-exon	FALSE	canonical	3	43	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTCTGAATGCAGT	NA	False	NA	-2	True	ATTAAA	-21	NA	48516424	48503188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48503663_48514653_48514862_48516104
ES.34979.2	chr9	-	217	1	Intergenic	novelGene_28391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTATTTATTTTTAAT	NA	False	NA	NA	False	AATAAA	-28	NA	48513946	48513729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48513700_48513900
ES.3498.1	chr10	-	3634	1	Antisense	novelGene_ENSMUSG00000001785.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAGAAGAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	85716474	85712840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_85712800_85716500
ES.34980.1	chr9	+	131	1	Intergenic	novelGene_28392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	48726639	48726770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48726600_48726800
ES.34981.1	chr9	+	181	1	Intergenic	novelGene_28393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAACAATAAGTAATAATAA	NA	False	NA	NA	False	NA	NA	NA	48760240	48760421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48760200_48760400
ES.34982.1	chr9	-	175	1	Intergenic	novelGene_28394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGACCTCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	48776277	48776102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48776100_48776300
ES.34983.1	chr9	-	2120	9	FSM	ENSMUSG00000032269.9	ENSMUST00000217289.2	1987	9	-135	2	-57	-1	multi-exon	FALSE	canonical	1	1	junction_3	0.927024810886958	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGTCTGTGACCAT	NA	False	NA	NA	False	AATAAA	-15	NA	48822456	48810514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820062_48822198
ES.34984.1	chr9	-	156	1	Intergenic	novelGene_28395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	4635	False	NA	NA	False	NA	NA	NA	48831705	48831549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48831500_48831700
ES.34985.1	chr9	+	3376	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-179	936	-89	-936	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGTCTCCGGTCCCCTG	NA	False	NA	26	True	NA	NA	NA	48896585	48952874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.10	chr9	+	4217	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	175.129679200477	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896645	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926436_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.100	chr9	+	4283	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	265.913594858472	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896725	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48903939_48904063_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922636_48926406_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.102	chr9	+	4117	23	NNC	ENSMUSG00000032267.9	novel	3065	14	NA	NA	7161	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.932296055001	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTATGTAGCATGA	NA	False	NA	7	True	AATAAA	-13	NA	48903925	48953804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48904063_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.103	chr9	+	7820	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	14885	0	intron_retention	FALSE	canonical	3	612	junction_7	74.3655553846295	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48911649	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.105	chr9	+	171	1	Intergenic	novelGene_28397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	751	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	48912200	48912371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48912200_48912400
ES.34985.106	chr9	+	3590	19	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	22959	-2	-8327	2	3prime_fragment	FALSE	canonical	3	612	junction_3	71.7853453183109	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCATGACCCTTTTT	NA	False	NA	15	True	AATAAA	-21	NA	48919723	48953812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.107	chr9	+	3356	17	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	24776	4	-6510	-4	3prime_fragment	FALSE	canonical	3	612	junction_1	74.9195141051382	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTATGTAGCATGACC	NA	False	NA	9	True	AATAAA	-15	NA	48921540	48953806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.108	chr9	+	4230	1	Intergenic	novelGene_28398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	787	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTC	NA	False	NA	NA	False	NA	NA	NA	48930146	48934376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48930100_48934400
ES.34985.109	chr9	+	4609	13	NNC	ENSMUSG00000032267.9	novel	535	2	NA	NA	568	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.770175030036	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATGTAGCATGACCC	NA	False	NA	10	True	AATAAA	-16	NA	48930152	48953807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48930618_48933889_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.110	chr9	+	7617	12	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	33655	0	835	0	3prime_fragment	FALSE	canonical	3	718	junction_4	58.5923019793528	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48930419	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.111	chr9	+	7396	11	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-2656	-1	intron_retention	FALSE	canonical	3	718	junction_3	56.455734872553	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48932321	48953809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.112	chr9	+	11146	4	ISM	ENSMUSG00000032267.9	ENSMUST00000215856.2	3065	14	4788	6138	-2139	606	intron_retention	FALSE	canonical	3	733	junction_1	36.3409777890836	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGGGTGGGGGTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	48932838	48947679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48935386_48937067_48937289_48938118_48938190_48939372
ES.34985.113	chr9	+	159	1	Intergenic	novelGene_28399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	784	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48933993	48934152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48934000_48934200
ES.34985.114	chr9	+	5172	11	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-440	-1	intron_retention	FALSE	canonical	0	0	junction_1	250.783352717041	877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48934537	48953809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48937289_48938126_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.116	chr9	+	203	1	Intergenic	novelGene_28400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGCAGAAATACTATGT	NA	False	NA	NA	False	NA	NA	NA	48942616	48942819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48942600_48942800
ES.34985.117	chr9	+	4714	6	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	47210	-1	461	1	3prime_fragment	FALSE	canonical	3	806	junction_1	41.6442072802449	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	14	True	AATAAA	-20	NA	48943974	48953811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.118	chr9	+	4754	2	NIC	ENSMUSG00000032267.9	novel	3065	14	NA	NA	-2118	-3	intron_retention	FALSE	canonical	3	815	junction_1	0	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATGTAGCATGACCC	NA	False	NA	10	True	AATAAA	-16	NA	48946857	48953807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48950478_48952673
ES.34985.14	chr9	+	3225	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-27	-948	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	178.741913069104	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGACTCAGTCTGGTC	NA	False	NA	14	True	NA	NA	NA	48896647	48952862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.15	chr9	+	7419	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-27	38	intron_retention	FALSE	non_canonical	0	0	junction_17	236.144706301136	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTGGACTTCATCGA	NA	False	NA	58	True	AATACA	-16	NA	48896647	48953855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48946213_48946253_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.17	chr9	+	1209	8	ISM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-62	31947	-23	6654	5prime_fragment	FALSE	canonical	3	642	junction_4	87.5391457624321	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATGGTGTATGGTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	48896651	48921863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542
ES.34985.18	chr9	+	4194	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-23	37	combination_of_known_splicesites	FALSE	canonical	1	44	junction_11	172.791357728867	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAGTGGACTTCATCG	NA	False	NA	57	True	AATACA	-15	NA	48896651	48953854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.2	chr9	+	4211	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-51	39	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	235.035956454425	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTGGACTTCATCGAA	NA	False	NA	59	True	AATACA	-17	NA	48896623	48953856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926436_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.21	chr9	+	4980	22	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_14	242.06825183975	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896662	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48921617_48922562_48922643_48926436_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.22	chr9	+	4378	25	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-11	41	combination_of_known_splicesites	FALSE	canonical	3	15	junction_19	223.484712377976	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGACTTCATCGAATT	NA	False	NA	61	True	AATACA	-19	NA	48896663	48953858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.23	chr9	+	4101	23	NIC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	-10	41	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	175.933525434753	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGACTTCATCGAATT	NA	False	NA	61	True	AATACA	-19	NA	48896664	48953858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.26	chr9	+	3372	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	-944	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	226.303903186008	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCAGTCTGGTCTCCG	NA	False	NA	18	True	NA	NA	NA	48896674	48952866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919371_48919465_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.27	chr9	+	4361	26	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	1	4568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	259.958919831576	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAACCCAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	48896675	48958385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673_48953812_48958343
ES.34985.29	chr9	+	4207	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	176.432639753846	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTATGTAGCATGACC	NA	False	NA	9	True	AATAAA	-15	NA	48896675	48953806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952684
ES.34985.3	chr9	+	4323	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-140	-50	-50	43	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACTTCATCGAATTTA	NA	False	NA	63	True	AATACA	-21	NA	48896624	48953860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.30	chr9	+	1445	13	NNC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	2	-1040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	223.298551396008	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48896676	48934345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48934290
ES.34985.35	chr9	+	3019	9	ISM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-29	29158	0	9443	5prime_fragment	FALSE	canonical	3	612	junction_8	98.8496332820714	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAAGTTGGAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	48896684	48924652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562
ES.34985.36	chr9	+	4186	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-29	-48	0	41	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGACTTCATCGAATT	NA	False	NA	61	True	AATACA	-19	NA	48896684	48953858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.37	chr9	+	9925	21	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	1	-1	intron_retention	FALSE	canonical	3	642	junction_4	69.7091098781214	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48896685	48953809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.38	chr9	+	4317	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	1	41	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_2	165.889491081918	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGACTTCATCGAATT	NA	False	NA	61	True	AATACA	-19	NA	48896685	48953858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911786_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.40	chr9	+	4395	25	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	228.159848936369	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGACCCTTTTTGA	NA	False	NA	17	True	AATAAA	-23	NA	48896686	48953814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48943808_48943989_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.41	chr9	+	4227	25	NNC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	292.290226297235	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGGTATGTAGCATG	NA	False	NA	6	True	AATAAA	-12	NA	48896687	48953803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921539_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.42	chr9	+	5220	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	4	-944	intron_retention	FALSE	canonical	3	642	junction_4	73.3825437854692	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCAGTCTGGTCTCCG	NA	False	NA	18	True	NA	NA	NA	48896688	48952866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.44	chr9	+	3193	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-23	939	6	-939	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTGGTCTCCGGTCCC	NA	False	NA	23	True	NA	NA	NA	48896690	48952871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.45	chr9	+	3319	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	-942	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_2	165.889491081918	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCAGTCTGGTCTCCGGT	NA	False	NA	20	True	NA	NA	NA	48896693	48952868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911786_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.46	chr9	+	2096	16	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	1438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	202.720563008952	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGTGGTGGTATTAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	48896693	48938632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48938381
ES.34985.47	chr9	+	6148	22	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	-6	intron_retention	FALSE	canonical	1	5	junction_7	180.918593336799	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTATGTAGCATGA	NA	False	NA	7	True	AATAAA	-13	NA	48896693	48953804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48922643_48926406_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.48	chr9	+	2755	20	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	-946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	184.575488089085	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTCAGTCTGGTCTC	NA	False	NA	16	True	NA	NA	NA	48896693	48952864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943628_48950296_48950478_48952673
ES.34985.5	chr9	+	5745	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-133	-1479	-43	1472	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGAGAAAAGTCCTTC	NA	False	NA	NA	False	NA	NA	NA	48896631	48955289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.50	chr9	+	5491	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_7	326.55563999316	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896693	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921539_48921617_48922565_48922648_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939409_48939602_48942026_48942222_48943513_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.52	chr9	+	3351	25	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	-949	combination_of_known_splicesites	FALSE	canonical	3	15	junction_19	223.484712377976	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAAGACTCAGTCTGGT	NA	False	NA	13	True	NA	NA	NA	48896693	48952861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.54	chr9	+	4338	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	269.030328603177	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATCAGTGGACTTCAT	NA	False	NA	55	True	AATACA	-13	NA	48896694	48953852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48928220_48928316_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942028_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.55	chr9	+	2604	16	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	1438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	266.822987515444	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGTGGTGGTATTAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	48896694	48938632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929162_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48938381
ES.34985.56	chr9	+	4639	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	-1	intron_retention	FALSE	canonical	3	10	junction_7	179.896694971525	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48896694	48953809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48949192_48950281_48950478_48952673
ES.34985.57	chr9	+	7958	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	-4	intron_retention	FALSE	canonical	3	612	junction_8	76.9000102096738	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTATGTAGCATGACC	NA	False	NA	9	True	AATAAA	-15	NA	48896694	48953806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.59	chr9	+	7889	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	1	intron_retention	FALSE	canonical	3	10	junction_7	179.932388410461	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	14	True	AATAAA	-20	NA	48896694	48953811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.6	chr9	+	4237	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-40	41	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	176.835807721632	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGACTTCATCGAATT	NA	False	NA	61	True	AATACA	-19	NA	48896634	48953858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.61	chr9	+	3047	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	-944	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.401822262911	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCAGTCTGGTCTCCG	NA	False	NA	18	True	NA	NA	NA	48896694	48952866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896791_48912892_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948478_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.62	chr9	+	8117	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	38	intron_retention	FALSE	canonical	3	612	junction_8	78.5199253999089	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTGGACTTCATCGA	NA	False	NA	58	True	AATACA	-16	NA	48896694	48953855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.63	chr9	+	5517	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	0	intron_retention	FALSE	canonical	1	5	junction_9	230.422272014781	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896694	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926406_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.64	chr9	+	4422	26	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.726461551414	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896694	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48903939_48904063_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.66	chr9	+	5242	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	10	0	intron_retention	FALSE	canonical	2	7	junction_6	230.168862151182	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896694	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919371_48919465_48919728_48919816_48920395_48920534_48921542_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.67	chr9	+	4424	26	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	11	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	294.574991470763	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTATGTAGCATGA	NA	False	NA	7	True	AATAAA	-13	NA	48896695	48953804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915098_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48943808_48943917_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.68	chr9	+	4124	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_1	169.097776009147	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896695	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.69	chr9	+	4309	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	228.159848936369	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896696	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48943808_48943917_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.7	chr9	+	6558	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-32	-936	intron_retention	FALSE	canonical	3	612	junction_8	80.2695356103886	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGTCTCCGGTCCCCTG	NA	False	NA	26	True	NA	NA	NA	48896642	48952874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.71	chr9	+	4475	26	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	262.126088743566	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTAGCATGACCCT	NA	False	NA	11	True	AATAAA	-17	NA	48896696	48953808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48943808_48943989_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.74	chr9	+	3501	12	ISM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	-12	21907	-12	-3482	5prime_fragment	FALSE	canonical	3	612	junction_8	88.7230811230479	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGAGGTGGGAGTAGG	NA	False	NA	NA	False	AATAAA	-16	NA	48896701	48931903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671
ES.34985.75	chr9	+	4532	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-12	403	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	176.835807721632	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCAGCCCTGTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	48896701	48954220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.76	chr9	+	3078	20	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	-63	6131	-12	606	5prime_fragment	FALSE	canonical	3	612	junction_8	72.6229590613429	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGGGTGGGGGTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	48896701	48947679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181
ES.34985.77	chr9	+	4129	24	NNC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	224.73982436997	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896701	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938110_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.78	chr9	+	1433	13	NNC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	-6	-986	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	282.74217741414	800	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48896707	48934399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48934322
ES.34985.79	chr9	+	4313	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	262.715146620611	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGCATGACCCTTTT	NA	False	NA	14	True	AATAAA	-20	NA	48896708	48953811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912583_48912710_48912807_48912941_48914293_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.8	chr9	+	4163	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	229.475722981793	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGTAGCATGACCCTT	NA	False	NA	12	True	AATAAA	-18	NA	48896643	48953809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48920395_48920534_48921542_48921617_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.80	chr9	+	4310	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.267002071369	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATGTAGCATGACCC	NA	False	NA	10	True	AATAAA	-16	NA	48896710	48953807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48903936_48904063_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.81	chr9	+	4177	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	175.739894153193	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896710	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915132_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.85	chr9	+	8646	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-1	-950	intron_retention	FALSE	canonical	2	7	junction_6	272.086933877349	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCAAGACTCAGTCTGG	NA	False	NA	12	True	NA	NA	NA	48896712	48952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919371_48919465_48919728_48919816_48920395_48920534_48921542_48921617_48922565_48926551_48927981_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.86	chr9	+	4209	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	175.739894153193	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896712	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915098_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.9	chr9	+	4344	25	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	226.303903186008	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTAGCATGACCCT	NA	False	NA	11	True	AATAAA	-17	NA	48896644	48953808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919371_48919465_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.90	chr9	+	6766	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	3	-945	intron_retention	FALSE	canonical	0	0	junction_14	183.726739314747	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTCAGTCTGGTCTCC	NA	False	NA	17	True	NA	NA	NA	48896716	48952865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.91	chr9	+	4175	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	173.427398013845	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896716	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948482_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.92	chr9	+	4205	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	174.328384473873	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896719	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950254_48950478_48952673
ES.34985.93	chr9	+	4196	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	177.06025161852	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCTTTTTGAAATACAT	NA	False	NA	24	True	AATAAA	-30	NA	48896719	48953821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926558_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.94	chr9	+	4052	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	181.001078714652	903	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896722	48953810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915247_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ES.34985.97	chr9	+	1458	13	NNC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	11	-986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	223.298551396008	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAGAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	48896724	48934399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48934283
ES.34985.98	chr9	+	3961	22	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	176.539114523995	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGGTATGTAGCATG	NA	False	NA	6	True	AATAAA	-12	NA	48896725	48953803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48950281_48950478_48952673
ES.34985.99	chr9	+	4967	10	NIC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	12	-3480	intron_retention	FALSE	canonical	3	10	junction_7	251.963842203158	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTAGGTA	NA	False	NA	NA	False	AATAAA	-18	NA	48896725	48931905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981
ES.34986.1	chr9	-	175	1	Intergenic	novelGene_28396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAAAACAAAA	9940	False	NA	NA	False	NA	NA	NA	48900993	48900818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_48900800_48901000
ES.34987.1	chr9	-	3829	1	Antisense	novelGene_ENSMUSG00000032267.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAGAGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	48917676	48913847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_48913800_48917700
ES.34987.2	chr9	-	3089	2	Antisense	novelGene_ENSMUSG00000032267.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	48917674	48913859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_48914395_48915120
ES.34988.1	chr9	-	8966	1	Antisense	novelGene_ENSMUSG00000032267.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGTGTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	48937877	48928911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_48928900_48937900
ES.34989.1	chr9	+	2985	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	-75	-47	-75	44	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTTCTTCTCTTTTC	NA	False	NA	67	True	NA	NA	NA	48966837	48990119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.11	chr9	+	3863	15	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-6	-18	intron_retention	FALSE	canonical	2	5	junction_10	78.8540372059254	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTTTCAGAGTTGAG	NA	False	NA	2	True	NA	NA	NA	48966906	48990054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984468_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.12	chr9	+	2945	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-6	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.6268567500249	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAACCCAGTTTTCTTC	NA	False	NA	60	True	NA	NA	NA	48966906	48990112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48972008_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.13	chr9	+	3253	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-2	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	77.3920466772193	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTTCTTCTCTTTTC	NA	False	NA	67	True	NA	NA	NA	48966910	48990119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984161_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.14	chr9	+	4258	14	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_7	106.097588214116	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48966913	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972531_48973492_48973646_48975309_48975502_48979959_48980143_48980873_48981113_48982881_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.15	chr9	+	3611	15	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	2	-5	intron_retention	FALSE	canonical	3	236	junction_12	29.1418942417956	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48966914	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48986337_48988751_48988955_48989498
ES.34989.16	chr9	+	4426	15	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_5	76.0204054239145	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	20	True	AGTAAA	-16	NA	48966914	48990072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972531_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.17	chr9	+	2662	15	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	80.3158306503844	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48966916	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.18	chr9	+	6879	6	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	6	7108	intron_retention	FALSE	canonical	3	254	junction_4	27.6651405201564	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48966918	48980413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48973646_48975309
ES.34989.19	chr9	+	2850	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	77.6060135126997	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	20	True	AGTAAA	-16	NA	48966919	48990072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972240_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.2	chr9	+	2929	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	76.2432947871483	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	20	True	AGTAAA	-16	NA	48966880	48990072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984468_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.20	chr9	+	2861	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	77.3920466772193	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGTGTCTTTAATAAC	NA	False	NA	21	True	AGTAAA	-17	NA	48966921	48990073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984496_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.22	chr9	+	2412	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	18	433	18	-433	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTCTGGGTTCCTC	NA	False	NA	NA	False	ATTAAA	-24	NA	48966930	48989639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.23	chr9	+	2726	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	20	117	20	-117	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTAAAATACGTTTT	NA	False	NA	-97	True	NA	NA	NA	48966932	48989955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.24	chr9	+	6212	14	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	31	-2	intron_retention	FALSE	canonical	3	17	junction_5	78.7626950413552	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGAGTGTCTTTAAT	NA	False	NA	18	True	AGTAAA	-14	NA	48966943	48990070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972531_48973492_48973646_48975309_48975502_48977978_48980143_48980873_48981113_48982881_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.25	chr9	+	2829	16	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	36	-14	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	73.7640080858469	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTCAGAGTTGAGAGTG	NA	False	NA	6	True	AGTAAA	-2	NA	48966948	48990058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972531_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.26	chr9	+	2496	14	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	1859	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	82.3222129535044	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGAGTGTCTTTAAT	NA	False	NA	18	True	AGTAAA	-14	NA	48968940	48990070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.27	chr9	+	3853	6	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	1993	-6	intron_retention	FALSE	canonical	3	248	junction_3	32.8536147174097	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAGAGTGAGTGTCTT	NA	False	NA	14	True	AGTAAA	-10	NA	48979999	48990066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48980143_48980873_48981113_48982881_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.28	chr9	+	2110	3	NIC	ENSMUSG00000032264.10	novel	2013	9	NA	NA	6992	-5	intron_retention	FALSE	canonical	3	316	junction_2	15	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48984998	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48986337_48988751_48988955_48989498
ES.34989.29	chr9	+	5183	1	Genic_Genomic	ENSMUSG00000032268.14_ENSMUSG00000032264.10	novel	NA	NA	NA	NA	-4142	3525	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	985	False	NA	NA	False	NA	NA	NA	48988417	48993600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_48988400_48993600
ES.34989.3	chr9	+	3862	15	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-21	0	intron_retention	FALSE	canonical	3	236	junction_11	30.9756322924709	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	20	True	AGTAAA	-16	NA	48966891	48990072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.4	chr9	+	4499	15	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-19	-5	intron_retention	FALSE	canonical	0	0	junction_5	80.0403278456095	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48966893	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972588_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.5	chr9	+	5616	13	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-19	-5	intron_retention	FALSE	canonical	3	248	junction_11	28.8439286891058	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTGAGTGTCTTT	NA	False	NA	15	True	AGTAAA	-11	NA	48966893	48990067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48985450_48986204_48986337_48988751
ES.34989.6	chr9	+	4102	8	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-19	7101	intron_retention	FALSE	canonical	3	254	junction_4	24.0051014986228	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48966893	48980406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48978143_48979959
ES.34989.7	chr9	+	5398	14	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	236	junction_10	32.0681596588474	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGAGTGAGTGTCTTTA	NA	False	NA	16	True	AGTAAA	-12	NA	48966900	48990068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.34989.8	chr9	+	3314	4	NIC	ENSMUSG00000032264.10	novel	1272	5	NA	NA	-11	7	intron_retention	FALSE	canonical	3	254	junction_3	32.7040602304294	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	48966901	48973312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_48969078_48971869_48971972_48972167_48972246_48972354
ES.34989.9	chr9	+	2710	15	NNC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.62951001798	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGAGAGTGAGTGTCT	NA	False	NA	13	True	AGTAAA	-9	NA	48966904	48990065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972531_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ES.3499.1	chr10	-	5191	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-56	-1258	4	1254	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAATGACTGGTATCCT	NA	False	NA	NA	False	NA	NA	NA	85752846	85726575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.10	chr10	-	3934	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_12	90.5316089673779	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752957	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752838
ES.3499.11	chr10	-	3833	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	67.9223085591178	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752861	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.12	chr10	-	4963	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	17	0	intron_retention	FALSE	canonical	3	181	junction_10	19.9902476222782	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752773	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.15	chr10	-	6150	10	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	181	junction_9	20.0665559243899	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752842	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.17	chr10	-	4039	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	81.5905682866183	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752802	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85751689_85751836_85752387_85752594_85752671
ES.3499.18	chr10	-	4997	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-21	0	intron_retention	FALSE	canonical	3	181	junction_10	20.3852888132594	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752811	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.19	chr10	-	2617	9	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.7410121066901	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85743260	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85734885_85734941_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139
ES.3499.2	chr10	-	4602	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-13	-712	-13	708	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTTTATACTTGCC	NA	False	NA	NA	False	NA	NA	NA	85752803	85727121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.20	chr10	-	3927	13	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	91.6986307906988	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752939	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744159_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752838
ES.3499.21	chr10	-	3868	11	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	86.5080343089588	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752792	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85752387_85752594_85752671
ES.3499.22	chr10	-	3810	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	68.283233666838	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752847	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.23	chr10	-	4001	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	85.7627541535368	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752836	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.25	chr10	-	3873	12	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	78.2839713178199	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85753005	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752915
ES.3499.27	chr10	-	3870	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	90.6790356146337	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752970	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752915
ES.3499.28	chr10	-	4039	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	84.7266874735932	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGAATTTGTCATGATC	NA	False	NA	NA	False	ATTAAA	-17	NA	85752997	85727830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752838
ES.3499.29	chr10	-	3854	11	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	79.7095351887088	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATTTGTCATGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85752879	85727832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85752387_85752594_85752671
ES.3499.3	chr10	-	4049	12	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-26	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	78.9937752542921	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTCATGATCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	85752816	85727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.32	chr10	-	3945	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	64.6648064257726	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752834	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729328_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.33	chr10	-	3787	11	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	65.5191575037408	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752834	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85752387_85752594_85752671
ES.3499.34	chr10	-	3856	12	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	66	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	62.8899077425605	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752936	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752838
ES.3499.35	chr10	-	4012	13	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	78.1381877758173	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752861	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744159_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.38	chr10	-	3673	13	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	81.9852205515658	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752938	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743264_85743371_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752915
ES.3499.39	chr10	-	3702	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.8584436581904	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752847	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743371_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.4	chr10	-	4032	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-149	-6	63	2	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTCATGATCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	85752939	85727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.40	chr10	-	3841	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	65.1170592468569	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85753002	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752919
ES.3499.41	chr10	-	3860	13	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	99.8369156285501	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752940	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729328_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752915
ES.3499.42	chr10	-	4145	14	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	99.834122778767	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752827	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744159_85744224_85746086_85746273_85748701_85748836_85751689_85751836_85752387_85752594_85752671
ES.3499.44	chr10	-	4031	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	64.5122834097802	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752825	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.45	chr10	-	4570	6	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	2139	0	intron_retention	FALSE	canonical	0	0	junction_1	106.914919445323	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85741223	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85734885_85734941_85735038_85735208_85736705_85737021_85737567_85737696_85738790
ES.3499.46	chr10	-	5052	11	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	181	junction_10	19.5846878964154	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752847	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.47	chr10	-	3123	11	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	66.3325711849013	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752831	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.48	chr10	-	6017	10	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	45	0	intron_retention	FALSE	canonical	3	7	junction_9	69.8219958975043	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752957	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752915
ES.3499.49	chr10	-	4079	12	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.0145993668447	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752841	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735173_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85742974_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.5	chr10	-	4062	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	-98	-2	54	2	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTCATGATCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	85752948	85727827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.52	chr10	-	5073	12	NIC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	27	0	intron_retention	FALSE	canonical	2	4	junction_7	81.3067856235244	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752823	85727833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85741363_85743139_85743935_85744159_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.55	chr10	-	4093	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	89.602362320049	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATGGAATTTGTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	85752841	85727835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85751689_85751836_85752387_85752594_85752671
ES.3499.56	chr10	-	3810	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	85.0922688314046	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATGGAATTTGTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	85752748	85727835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746091_85746273_85748719_85748836_85752387_85752594_85752671
ES.3499.57	chr10	-	4016	13	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	86.9988824960158	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATGGAATTTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	85752848	85727837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744159_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.58	chr10	-	6142	11	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	1	-4	intron_retention	FALSE	canonical	3	12	junction_6	83.4160655989001	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATGGAATTTGT	NA	False	NA	NA	False	ATTAAA	-10	NA	85752789	85727837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.59	chr10	-	1877	5	ISM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	-12	14881	-12	-4	5prime_fragment	FALSE	canonical	3	181	junction_4	21.0297408448131	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGACAATATAGTTGTG	NA	False	NA	NA	False	AATAAA	-38	NA	85752802	85742714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.6	chr10	-	3885	12	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	63	1	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	78.0772027340687	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAATTTGTCATGATCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	85752939	85727828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752838
ES.3499.7	chr10	-	3904	12	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.6571187926358	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752820	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735173_85736698_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.8	chr10	-	4028	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	76.6399862995812	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752884	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ES.3499.9	chr10	-	7122	8	NIC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	-121	0	intron_retention	FALSE	canonical	3	192	junction_3	16.3694588692928	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752641	85727829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387
ES.34990.1	chr9	+	173	1	Intergenic	novelGene_28401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGAGTT	2731	False	NA	NA	False	NA	NA	NA	48994727	48994900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_48994700_48994900
ES.34991.1	chr9	-	180	1	Intergenic	novelGene_28402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	49002614	49002434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49002400_49002600
ES.34992.1	chr9	+	1687	10	NNC	ENSMUSG00000032268.14	novel	1654	9	NA	NA	-174	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	3.95655418105886	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGGTTGCGCTCTCCC	3446	False	NA	7	True	ATTAAA	-15	NA	49020127	49028885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_49020181_49020301_49020438_49020641_49020756_49022767_49022812_49023487_49023651_49024423_49024603_49025793_49025893_49026332_49026476_49026764_49026918_49028282
ES.34992.2	chr9	+	1436	8	NNC	ENSMUSG00000032268.14	novel	2045	13	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.99795876701026	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGGTTGCGCTCTCCC	3735	False	NA	7	True	ATTAAA	-15	NA	49020416	49028885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_49020438_49020641_49020756_49022767_49022812_49023471_49023651_49024423_49024603_49026332_49026476_49026764_49026918_49028282
ES.34993.1	chr9	-	159	1	Intergenic	novelGene_28403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTGG	409	False	NA	NA	False	NA	NA	NA	49055082	49054923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49054900_49055100
ES.34994.1	chr9	-	215	1	Intergenic	novelGene_28404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATTAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	49115911	49115696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49115700_49115900
ES.34995.1	chr9	-	3620	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	9	-1	-1	1	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTCTTTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	49397516	49348261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
ES.34995.2	chr9	-	2778	21	NIC	ENSMUSG00000040219.5	novel	3628	22	NA	NA	38	-1301	intron_retention	FALSE	canonical	3	14	junction_3	5.58659108938537	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	0	True	AATAAA	-27	NA	49397477	49349563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383844_49395969_49396043_49397445
ES.34995.3	chr9	-	2314	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	9	1305	-1	-1305	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGATGTCTGCCGGG	NA	False	NA	-4	True	AATAAA	-23	NA	49397516	49349567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
ES.34995.4	chr9	-	2270	21	NNC	ENSMUSG00000040219.5	novel	3628	22	NA	NA	2770	-1313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	9.62951192948012	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTCCAAAACTGGATGT	NA	False	NA	-12	True	AATAAA	-15	NA	49394745	49349575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383734_49383844_49394585
ES.34995.5	chr9	-	2469	21	NNC	ENSMUSG00000040219.5	novel	3628	22	NA	NA	39	-2804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.13728624920988	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGGTCTCAGGAGCTT	NA	False	NA	NA	False	NA	NA	NA	49397476	49351066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364791_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383840_49395969_49396043_49397445
ES.34996.1	chr9	+	603	1	Antisense	novelGene_ENSMUSG00000039542.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-15	NA	49414767	49415370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_49414800_49415400
ES.34997.1	chr9	+	3684	1	Intergenic	novelGene_28407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	AATACA	-39	NA	49702101	49705785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_49702100_49705800
ES.34998.1	chr9	-	5564	16	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	165	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.0171948539046	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTCTAGTCCAACTGGG	6535	False	NA	-3	True	AATAAA	-20	NA	49479684	49413437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ES.34998.12	chr9	-	4403	19	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	-27	1028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.6472547290711	287	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTTTAGAGCCCAGAAT	8490	False	NA	NA	False	AATAAA	-15	NA	49710252	49415319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49534145_49534352_49709977
ES.34998.15	chr9	-	2771	16	ISM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	230400	2932	24	-20	3prime_fragment	FALSE	canonical	1	2	junction_5	45.6150072770891	272	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	6394	False	NA	NA	False	NA	NA	NA	49479825	49416367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ES.34998.16	chr9	-	4639	12	NIC	ENSMUSG00000039542.17	novel	6564	20	NA	NA	76	2343	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	40.352987948399	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATCGGTGTTTTTGTGGC	6446	False	NA	NA	False	NA	NA	NA	49479773	49440232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ES.34998.17	chr9	-	2477	14	NNC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	0	-637	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTGTCTCCAATAGATA	8520	False	NA	NA	False	AATAAA	-29	NA	49710222	49443212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ES.34998.18	chr9	-	6302	1	NIC	ENSMUSG00000039542.17	novel	6564	20	NA	NA	1088	-4365	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGTACACAAAATATA	NA	False	NA	NA	False	NA	NA	NA	49453242	49446940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_49446900_49453200
ES.34998.19	chr9	-	1795	1	Intergenic	novelGene_28405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	2138	False	NA	NA	False	NA	NA	NA	49472295	49470500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49470500_49472300
ES.34998.20	chr9	-	2312	1	Intergenic	novelGene_28406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGCAGAGTGTGGCAG	NA	False	NA	NA	False	NA	NA	NA	49602328	49600016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49600000_49602300
ES.34998.6	chr9	-	4125	11	NNC	ENSMUSG00000039542.17	novel	6564	20	NA	NA	-3267	-1449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.1242468765262	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAACAACTATTCAGGAA	NA	False	NA	20	True	NA	NA	NA	49457597	49414896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49416864_49418152_49418954_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457
ES.34998.8	chr9	-	4046	16	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	176	1403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.0171948539046	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTGGAAGGTATAG	6546	False	NA	-28	True	AATAAA	-13	NA	49479673	49414944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630
ES.34998.9	chr9	-	3800	15	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	1754	1402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1570709197014	287	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTTGTGGAAGGTATA	8124	False	NA	-29	True	AATAAA	-12	NA	49478095	49414945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_49415120_49415160_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974
ES.34999.1	chr9	-	2422	1	Intergenic	novelGene_28408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCTTTGGACATGA	9082	False	NA	-6	True	NA	NA	NA	49789870	49787448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49787400_49789900
ES.34999.2	chr9	-	215	2	Intergenic	novelGene_28409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGCTTTGGACATGA	9045	False	NA	-6	True	NA	NA	NA	49789907	49787448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_49787550_49789793
ES.35.1	chr1	-	748	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCTCCTCCAATTGA	NA	False	NA	NA	False	NA	NA	NA	6293651	6292903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6292900_6293700
ES.350.1	chr1	-	5316	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	39396840	39391524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39391500_39396800
ES.350.2	chr1	-	148	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	39395625	39395477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39395500_39395600
ES.3500.1	chr10	+	131	1	Intergenic	novelGene_2686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAACCAAAACC	NA	False	NA	NA	False	NA	NA	NA	85758536	85758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_85758500_85758700
ES.35000.1	chr9	-	4379	1	Intergenic	novelGene_28410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	50031160	50026781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50026800_50031200
ES.35001.1	chr9	-	171	1	Intergenic	novelGene_28411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	50078006	50077835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50077800_50078000
ES.35002.1	chr9	-	790	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	-17	-5	-17	5	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGGGAATCCCCTGAG	NA	False	NA	NA	False	NA	NA	NA	50256285	50255495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50255500_50256300
ES.35003.1	chr9	+	5043	3	NIC	ENSMUSG00000032068.15	novel	1689	4	NA	NA	-42	3517	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	22	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGGTGTCTGAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	50405782	50420299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50406047_50412372_50412429_50415576
ES.35003.2	chr9	+	1355	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	-12	346	-12	-346	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACCGAAATGTGCTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	50405812	50416436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
ES.35003.3	chr9	+	1684	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	0	5	0	-5	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTCCTTTTCTATACC	NA	False	NA	NA	False	AATAAA	-12	NA	50405824	50416777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
ES.35003.4	chr9	+	2977	4	NNC	ENSMUSG00000032068.15	novel	1689	4	NA	NA	0	-344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.4821855949366	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGAAATGTGCTAAATTG	NA	False	NA	NA	False	AATAAA	-19	NA	50405824	50416438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50406047_50410394_50412232_50412372_50412429_50415576
ES.35004.1	chr9	-	4810	3	ISM	ENSMUSG00000032067.7	ENSMUST00000213640.2	3117	4	-86	0	-18	0	intron_retention	FALSE	canonical	3	124	junction_1	9	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7868	False	NA	NA	False	AATAAA	-17	NA	50440042	50432917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50433637_50433828_50433900_50436022
ES.35004.2	chr9	-	4399	4	NIC	ENSMUSG00000032067.7	novel	3117	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	38	junction_3	45.38232646698	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7955	False	NA	NA	False	AATAAA	-17	NA	50439955	50432917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50433637_50433828_50433900_50436022_50439533_50439856
ES.35004.3	chr9	-	1162	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7929	False	NA	NA	False	AATAAA	-17	NA	50439981	50432917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
ES.35004.4	chr9	-	1096	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	-51	1	-7	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7908	False	NA	NA	False	AATAAA	-17	NA	50440002	50432917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
ES.35004.5	chr9	-	2765	5	NNC	ENSMUSG00000032067.7	novel	589	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_3	65.8843684040456	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTTTTCAGGATTTA	7946	False	NA	NA	False	AATAAA	-16	NA	50439964	50432918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50433629_50433828_50433900_50436022_50436080_50436452_50436585_50438169
ES.35004.6	chr9	-	3194	5	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	38	junction_4	45.5850852801659	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTTTTCAGGATTTA	7963	False	NA	NA	False	AATAAA	-16	NA	50439947	50432918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50433637_50433828_50433900_50436022_50438250_50439445_50439533_50439856
ES.35004.7	chr9	-	1242	7	FSM	ENSMUSG00000032067.7	ENSMUST00000214213.2	589	7	-13	-640	-2	-1	multi-exon	FALSE	canonical	0	0	junction_3	52.7983585603441	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTTTTCAGGATTTA	7957	False	NA	NA	False	AATAAA	-16	NA	50439953	50432918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436452_50436585_50438169_50438250_50439445_50439533_50439856
ES.35004.8	chr9	-	1520	1	FSM	ENSMUSG00000032067.7	ENSMUST00000217146.2	4211	1	2689	2	2689	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTTTTCAGGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	50434438	50432918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50432900_50434400
ES.35005.1	chr9	+	207	1	Intergenic	novelGene_28412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGGAGATGGGACCTC	NA	False	NA	NA	False	NA	NA	NA	50443579	50443786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_50443600_50443800
ES.35006.1	chr9	-	1973	10	ISM	ENSMUSG00000032066.10	ENSMUST00000119103.2	2118	12	8912	-26	8912	26	3prime_fragment	TRUE	canonical	0	0	junction_4	1.47405546238018	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGAAGATCTATTTTAT	NA	False	NA	NA	False	ATTAAA	-45	NA	50457569	50444360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50444820_50445909_50446021_50446777_50446961_50447530_50447669_50450145_50450314_50451396_50451558_50452342_50452472_50455756_50455860_50456646_50456763_50457164
ES.35007.1	chr9	+	959	6	NNC	ENSMUSG00000039217.14	novel	860	6	NA	NA	60	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCCAGCCCAATTT	NA	False	NA	4	True	AGTAAA	-15	NA	50466186	50493138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50466278_50476668_50476827_50486567_50486663_50489060_50489193_50490586_50490721_50492789
ES.35008.1	chr9	-	1020	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	-17	-108	-2	2	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTATTTTTTTATT	6960	False	NA	NA	False	AATAAA	-17	NA	50472627	50468116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
ES.35008.2	chr9	-	841	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	3	51	3	-51	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTCCAGTTTCTTAA	6980	False	NA	NA	False	ATTAAA	-11	NA	50472607	50468275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
ES.35009.1	chr9	+	561	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	-40	-3	-40	3	multi-exon	FALSE	canonical	3	1341	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCTTCTAAATCCCAAT	8773	False	NA	24	True	AATAAA	-18	NA	50515169	50516623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50515340_50516232
ES.35009.2	chr9	+	1376	1	NIC	ENSMUSG00000039016.6	novel	518	2	NA	NA	33	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGTTCTTCTAAATC	8846	False	NA	19	True	AATAAA	-13	NA	50515242	50516618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50515200_50516600
ES.35009.3	chr9	+	6040	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	33	-5555	33	5555	multi-exon	FALSE	canonical	3	1341	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATGAAGCCCTAGAGAT	8846	False	NA	NA	False	NA	NA	NA	50515242	50522175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50515340_50516232
ES.35009.4	chr9	+	655	2	NNC	ENSMUSG00000039016.6	novel	518	2	NA	NA	138	-2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGTTCTTCTAAATC	8951	False	NA	19	True	AATAAA	-13	NA	50515347	50516618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50515617_50516232
ES.35009.5	chr9	+	6828	1	Genic_Genomic	ENSMUSG00000039016.6	novel	NA	NA	NA	NA	138	5555	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATGAAGCCCTAGAGAT	8951	False	NA	NA	False	NA	NA	NA	50515347	50522175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_50515300_50522200
ES.3501.1	chr10	+	1624	1	FSM	ENSMUSG00000085111.4	ENSMUST00000170396.3	2016	1	346	46	346	-46	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTGGTGTTTGACAC	NA	False	NA	NA	False	AATAAA	-18	NA	85763890	85765514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85763900_85765500
ES.35010.1	chr9	-	2892	3	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	-4	15	intron_retention	FALSE	canonical	3	1351	junction_2	56.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTACTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	50515116	50507641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50508551_50510060_50511965_50515037
ES.35010.10	chr9	-	1297	5	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	-3	10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	697.644967014025	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATACATTGTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	50515115	50507646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50508551_50510060_50510206_50510767_50510821_50511847_50511965_50515037
ES.35010.11	chr9	-	2117	8	Fusion	ENSMUSG00000000171.6_ENSMUSG00000059820.15	novel	2805	5	NA	NA	34	6	intron_retention	FALSE	canonical	0	0	junction_3	611.223530372999	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAAATACATTGTACT	140	False	NA	NA	False	AATAAA	-9	NA	50528530	50507650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_50508551_50510060_50510206_50511847_50511965_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ES.35010.12	chr9	-	2302	4	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	658.520057907629	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATATTATATAATG	NA	False	NA	NA	False	AAGAAA	-27	NA	50515112	50507665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50508551_50510060_50510206_50510767_50511965_50515037
ES.35010.14	chr9	-	2926	4	NIC	ENSMUSG00000059820.15	novel	3316	6	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	44.2894519672072	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTTACTTTTTAACA	94	False	NA	-1	True	AATAAA	-19	NA	50528576	50516537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50519237_50523676_50523778_50526782_50526860_50528527
ES.35010.17	chr9	-	3676	6	NNC	ENSMUSG00000059820.15	novel	1225	6	NA	NA	-17	2	intron_retention	FALSE	canonical	1	3	junction_1	47.2457405487521	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTTACTTTTTAACA	72	False	NA	-1	True	AATAAA	-19	NA	50528598	50516537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50519191_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ES.35010.19	chr9	-	4101	5	ISM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	883	0	683	0	3prime_fragment	FALSE	canonical	3	103	junction_3	11.8189466535728	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	789	False	NA	-3	True	AATAAA	-17	NA	50527881	50516539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782
ES.35010.2	chr9	-	4410	2	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	-12	15	intron_retention	FALSE	canonical	3	1351	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTACTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	50515124	50507641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50511965_50515037
ES.35010.20	chr9	-	3199	7	NNC	ENSMUSG00000059820.15	novel	3339	7	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.8387369024038	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGCTCTGTTACTTTT	117	False	NA	-6	True	AATAAA	-14	NA	50528553	50516542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50528055_50528527
ES.35010.23	chr9	-	3045	6	NNC	ENSMUSG00000059820.15	novel	3316	6	NA	NA	16	-248	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	45.4990109782619	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCCTTAGGCTAAGGC	NA	False	NA	-3	True	AATAAA	-17	NA	50528748	50516791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50519234_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ES.35010.24	chr9	-	3405	6	FSM	ENSMUSG00000059820.15	ENSMUST00000147671.2	1225	6	29	-2209	29	-248	multi-exon	FALSE	canonical	3	45	junction_5	31.9023510105447	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCCTTAGGCTAAGGC	135	False	NA	-3	True	AATAAA	-17	NA	50528535	50516791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ES.35010.26	chr9	-	2545	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	16	755	16	-751	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTGGCCAGATGTG	NA	False	NA	NA	False	AATAAA	-17	NA	50528748	50517294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ES.35010.27	chr9	-	4351	5	FSM	ENSMUSG00000059820.15	ENSMUST00000145139.8	2805	5	18	-1564	15	-751	multi-exon	FALSE	canonical	3	45	junction_4	31.5386667441729	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTGGCCAGATGTG	121	False	NA	NA	False	AATAAA	-17	NA	50528549	50517294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ES.35010.28	chr9	-	2494	7	NNC	ENSMUSG00000059820.15	novel	3339	7	NA	NA	-23	-755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	48.8387369024038	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATATGGTTGGCCAGA	66	False	NA	NA	False	AATAAA	-13	NA	50528604	50517298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50528055_50528527
ES.35010.3	chr9	-	2763	3	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	-10	12	intron_retention	FALSE	canonical	3	1351	junction_2	20	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTACTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	50515122	50507644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50510206_50511847_50511965_50515037
ES.35010.30	chr9	-	2573	6	FSM	ENSMUSG00000059820.15	ENSMUST00000147671.2	1225	6	15	-1363	15	-1094	multi-exon	FALSE	canonical	3	45	junction_5	31.9023510105447	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGGCTGGTAGAACAG	121	False	NA	NA	False	ATTAAA	-20	NA	50528549	50517637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ES.35010.31	chr9	-	1979	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	217	1120	17	-1116	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAACCAAAATACCAC	123	False	NA	NA	False	NA	NA	NA	50528547	50517659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ES.35010.32	chr9	-	1902	4	NNC	ENSMUSG00000059820.15	novel	3316	6	NA	NA	2	1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.251655124174	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACCCACTTCCCAGTCT	NA	False	NA	NA	False	AATGAA	-16	NA	50528762	50517744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50519234_50523676_50523778_50526782_50526860_50528527
ES.35010.4	chr9	-	7471	1	Genic_Genomic	ENSMUSG00000000171.6	novel	NA	NA	NA	NA	-3	12	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTGTACTTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	50515115	50507644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_50507600_50515100
ES.35010.5	chr9	-	1320	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	-78	-11	-78	11	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTGTACTTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	50515190	50507645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
ES.35011.1	chr9	-	178	2	Intergenic	novelGene_28413	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	850	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAAGGATTAA	NA	False	NA	NA	False	NA	NA	NA	50562527	50529089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50529099_50562358
ES.35011.10	chr9	-	3183	5	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	-824	-138	intron_retention	FALSE	canonical	3	1156	junction_4	77.3866105989919	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCTCAGGTAAGACTG	4840	False	NA	NA	False	AATAAA	-19	NA	50556485	50546070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50549384_50551523_50551640_50555325_50555834_50556338
ES.35011.11	chr9	-	4666	4	ISM	ENSMUSG00000000168.11	ENSMUST00000126933.8	779	5	1553	-1754	1254	-141	3prime_fragment	FALSE	canonical	3	1254	junction_3	46.1808040928985	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTCTCAGGTAAGA	7217	False	NA	NA	False	AATAAA	-16	NA	50554108	50546073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523
ES.35011.12	chr9	-	3614	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	275	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACATGTTCTCAGGTAA	NA	False	NA	NA	False	AATAAA	-14	NA	50570805	50546075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.13	chr9	-	3484	13	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	290	-145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	357.804842834129	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAACATGTTCTCAGGT	NA	False	NA	NA	False	AATAAA	-12	NA	50570790	50546077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50549220_50549384_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.14	chr9	-	3258	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	243	534	243	-534	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATGTGTTTTCATAA	NA	False	NA	NA	False	AATAAA	-21	NA	50570837	50546466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.15	chr9	-	2948	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	834	253	-834	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACATAGCAAGTCTCTG	NA	False	NA	NA	False	GATAAA	-16	NA	50570827	50546766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.16	chr9	-	3079	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	-187	1143	-187	752	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGAAGTGGAGCTTTGC	NA	False	NA	4	True	AATAAA	-27	NA	50571267	50547075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.17	chr9	-	4060	6	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	250	748	intron_retention	FALSE	canonical	3	1156	junction_5	69.2548915239927	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTGTAGAAGTGGAGCT	2647	False	NA	0	True	AATAAA	-23	NA	50558678	50547079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338
ES.35011.18	chr9	-	2553	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	259	747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.36533654656	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGTTGTAGAAGTGGAGC	NA	False	NA	-1	True	AATAAA	-22	NA	50570821	50547080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548818_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.19	chr9	-	5104	12	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	250	746	intron_retention	FALSE	canonical	3	1156	junction_4	80.0520491837179	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGTTGTAGAAGTGGAG	NA	False	NA	-2	True	AATAAA	-21	NA	50570830	50547081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.2	chr9	-	3877	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	209	-51	209	51	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCAATACAGGTGAC	NA	False	NA	50	True	ATTAAA	-18	NA	50570871	50545881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.21	chr9	-	2602	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	269	746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	344.897892445022	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACGTTGTAGAAGTGGAG	NA	False	NA	-2	True	AATAAA	-21	NA	50570811	50547081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556353_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.23	chr9	-	2592	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	283	745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	344.897892445022	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACGTTGTAGAAGTGGA	NA	False	NA	-3	True	AATAAA	-20	NA	50570797	50547082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555824_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.24	chr9	-	2616	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	266	745	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACGTTGTAGAAGTGGA	NA	False	NA	-3	True	AATAAA	-20	NA	50570814	50547082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.25	chr9	-	2350	13	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	296	744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	355.18143837575	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACGTTGTAGAAGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	50570784	50547083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548818_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.27	chr9	-	2473	13	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	252	744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	473.536422100302	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACGTTGTAGAAGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	50570828	50547083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.28	chr9	-	968	3	NNC	ENSMUSG00000000168.11	novel	779	5	NA	NA	5885	741	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	683.5	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAACACGTTGTAGAAG	5699	False	NA	-7	True	AATAAA	-16	NA	50549477	50547086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549414
ES.35011.29	chr9	-	2312	12	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	290	741	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	370.464885522176	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAACACGTTGTAGAAG	NA	False	NA	-7	True	AATAAA	-16	NA	50570790	50547086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.3	chr9	-	3726	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	281	-2	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_2	331.704117101032	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGATCTGTTGGTAG	NA	False	NA	-3	True	ATTAAA	-24	NA	50570799	50545934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549246_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.31	chr9	-	2329	13	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	272	624	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	355.18143837575	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATAAGCCCGCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	50570808	50547203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.32	chr9	-	2785	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	-21	1271	-21	624	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATAAGCCCGCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	50571101	50547203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.34	chr9	-	2130	12	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	253	624	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	372.819057435074	848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATAAGCCCGCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	50570827	50547203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562188_50569513_50569590_50569987_50570090_50570490
ES.35011.35	chr9	-	2491	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	265	619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAAAGATATAAGCCCG	NA	False	NA	NA	False	AATAAA	-14	NA	50570815	50547208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.36	chr9	-	2349	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	-21	1707	-21	188	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTATTCAGTCCAG	NA	False	NA	7	True	ATTAAA	-30	NA	50571101	50547639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.37	chr9	-	1920	13	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	236	179	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	355.18143837575	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGTTAATTTTATTAT	NA	False	NA	-2	True	ATTAAA	-21	NA	50570844	50547648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.38	chr9	-	2035	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	280	178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTAGTTAATTTTATTA	NA	False	NA	-3	True	ATTAAA	-20	NA	50570800	50547649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.4	chr9	-	3630	13	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	239	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	355.18143837575	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGATCTGTTGGTA	NA	False	NA	-4	True	ATTAAA	-23	NA	50570841	50545935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.41	chr9	-	1525	11	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	267	-533	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	381.483472774378	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAGTGATGTTGTTTCT	NA	False	NA	NA	False	CATAAA	-15	NA	50570813	50549288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50549384_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.42	chr9	-	2556	11	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	267	4581	267	704	5prime_fragment	FALSE	canonical	3	1156	junction_3	75.2651313690477	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGACTGGGAGCCTGT	NA	False	NA	NA	False	AATAAA	-28	NA	50570813	50550513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.43	chr9	-	177	1	Intergenic	novelGene_28414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	50562526	50562349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50562300_50562500
ES.35011.5	chr9	-	3516	12	NIC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	236	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	370.464885522176	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTGATCTGTTGGT	NA	False	NA	-5	True	ATTAAA	-22	NA	50570844	50545936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50547855_50548755_50548893_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.6	chr9	-	3730	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	226	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.36533654656	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTGATCTGTTGGT	NA	False	NA	-5	True	ATTAAA	-22	NA	50570854	50545936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548818_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.7	chr9	-	3777	14	NNC	ENSMUSG00000000168.11	novel	4035	14	NA	NA	249	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	343.843847866988	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATGTTTGATCTGTTG	NA	False	NA	-7	True	ATTAAA	-20	NA	50570831	50545938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561067_50562046_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35011.9	chr9	-	3678	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	226	131	226	-131	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAAGACTGAATCTCA	NA	False	NA	NA	False	AATAAA	-26	NA	50570854	50546063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ES.35012.1	chr9	+	201	1	Intergenic	novelGene_28416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	50647920	50648121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_50647900_50648100
ES.35013.1	chr9	-	6046	20	FSM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	-323	-4	-323	0	multi-exon	FALSE	canonical	3	25	junction_7	7.12181308422569	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTCATTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	50639690	50574051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.13	chr9	-	4735	21	NNC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-7	-1471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	13.397387805091	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTACATCGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	50639282	50575526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50608026_50608599_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.16	chr9	-	2385	1	NIC	ENSMUSG00000032064.18	novel	5709	20	NA	NA	17781	-1473	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTTACATCGTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	50577913	50575528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50575500_50577900
ES.35013.18	chr9	-	2125	19	NNC	ENSMUSG00000032064.18	novel	364	4	NA	NA	12	-2498	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.4927302744876	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTAGTCTCATAT	9217	False	NA	NA	False	AATAAA	-10	NA	50650735	50590501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50590663_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50648943_50649036_50650565
ES.35013.19	chr9	-	2192	15	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-7	-4879	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	11.3064908213768	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTTGATATCACTGTG	NA	False	NA	NA	False	AGTAAA	-20	NA	50639282	50592882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.2	chr9	-	5800	19	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-167	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	10.077477638554	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTCATTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	50639534	50574051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.20	chr9	-	2317	16	ISM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	47	18830	-45	-4882	5prime_fragment	FALSE	canonical	3	25	junction_3	7.76316086827181	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAACTCTTGATATCACT	NA	False	NA	NA	False	AGTAAA	-17	NA	50639320	50592885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.21	chr9	-	2279	16	NIC	ENSMUSG00000032064.18	novel	2420	21	NA	NA	-14	-4883	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	16.1883359929989	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTAACTCTTGATATCAC	9191	False	NA	NA	False	AGTAAA	-16	NA	50650761	50592886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50648943_50649036_50650565
ES.35013.22	chr9	-	2116	7	ISM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	-34	29845	-34	867	5prime_fragment	FALSE	canonical	3	46	junction_1	1.77169096878911	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGAGTACTTAATGAC	NA	False	NA	NA	False	TTTAAA	-20	NA	50639401	50603900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.23	chr9	-	1758	8	NNC	ENSMUSG00000032064.18	novel	415	3	NA	NA	9	814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.8183573174416	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	50639266	50603953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50604673_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ES.35013.24	chr9	-	479	1	Intergenic	novelGene_28415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	50634809	50634330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50634300_50634800
ES.35013.3	chr9	-	5708	20	FSM	ENSMUSG00000032064.18	ENSMUST00000034566.15	5709	20	1	0	1	0	multi-exon	FALSE	canonical	1	1	junction_18	10.9443315625853	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTCATTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	50639274	50574051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622064_50622273_50639085
ES.35013.4	chr9	-	3883	5	NNC	ENSMUSG00000032064.18	novel	5709	20	NA	NA	2433	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.3458710382775	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTTCATTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	50593261	50574051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593184
ES.35013.7	chr9	-	5475	19	NIC	ENSMUSG00000032064.18	novel	5709	20	NA	NA	104	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	13.0181497234523	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTTCTTCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50639134	50574054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622064_50622273_50639085
ES.35013.8	chr9	-	3899	5	NNC	ENSMUSG00000032064.18	novel	1099	8	NA	NA	2466	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.3458710382775	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCACTTCTTCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50593228	50574054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593132
ES.35013.9	chr9	-	5683	21	NNC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	13.487030807409	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCACTTCTTCATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50639282	50574055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50618817_50618867_50622142_50622273_50639085
ES.35014.1	chr9	-	1212	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	36	-6	26	6	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATTGTTCCTGGAGCTG	2167	False	NA	NA	False	AATAAA	-23	NA	50657785	50650984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
ES.35014.2	chr9	-	1238	4	NNC	ENSMUSG00000032062.4	novel	1242	4	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.8423039781937	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTGGTGATTGATTGT	2172	False	NA	NA	False	AATAAA	-12	NA	50657780	50650995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50652050_50652460_50652568_50653560_50653599_50657741
ES.35014.3	chr9	-	613	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	37	592	27	-592	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAAAGGTTGACCT	2168	False	NA	NA	False	NA	NA	NA	50657784	50651582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
ES.35015.1	chr9	-	840	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	-70	3	-9	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTTGTGCTGCTTC	NA	False	NA	-10	True	AATAAA	-13	NA	50663663	50662380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50663034_50663476
ES.35016.1	chr9	+	890	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	143	-87	30	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAACCTGCCTCGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	50664349	50667930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50664778_50665811_50665935_50667591
ES.35017.1	chr9	+	2305	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	1	11	intron_retention	TRUE	canonical	3	72	junction_2	2.62466929133727	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTGGTTTTGTTTTG	NA	False	NA	13	True	AAAAAG	-28	NA	50679538	50683980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50679987_50680145_50681409_50682091_50682730
ES.35017.10	chr9	+	2059	3	FSM	ENSMUSG00000037845.15	ENSMUST00000176619.2	2527	3	16	452	3	-426	multi-exon	FALSE	canonical	3	72	junction_1	0.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGCCTATGGTATTTC	NA	False	NA	NA	False	TATAAA	-17	NA	50679553	50683517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50680145_50681409_50682091_50682730
ES.35017.11	chr9	+	1410	5	NNC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	3	-426	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2674371464484	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGCCTATGGTATTTC	NA	False	NA	NA	False	TATAAA	-17	NA	50679553	50683517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50679756_50679987_50680145_50681409_50681515_50681931_50682091_50682730
ES.35017.12	chr9	+	3208	18	Fusion	ENSMUSG00000037845.15_ENSMUSG00000032059.14	novel	463	5	NA	NA	3	99	multi-exon	FALSE	canonical	0	0	junction_4	60.6152424102779	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTAGTCTGAGGCCAT	NA	False	NA	137	True	AATAGA	-19	NA	50679553	50754941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.13	chr9	+	3322	2	NIC	ENSMUSG00000037845.15	novel	2527	3	NA	NA	3	-428	intron_retention	FALSE	canonical	3	73	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTTGCCTATGGTATT	NA	False	NA	NA	False	TATAAA	-15	NA	50679553	50683515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50682091_50682730
ES.35017.14	chr9	+	5064	2	NIC	ENSMUSG00000037845.15	novel	2527	3	NA	NA	4	610	intron_retention	FALSE	canonical	3	73	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	50679554	50685258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50682091_50682730
ES.35017.15	chr9	+	1959	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	20	679	5	0	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679555	50683969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ES.35017.16	chr9	+	3189	3	FSM	ENSMUSG00000037845.15	ENSMUST00000176619.2	2527	3	18	-680	5	1	multi-exon	FALSE	canonical	3	72	junction_1	0.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGAGCATGTGTCCTTA	NA	False	NA	NA	False	NA	NA	NA	50679555	50684649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50680145_50681409_50682091_50682730
ES.35017.17	chr9	+	1859	5	NNC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.2674371464484	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679556	50683969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50679756_50679987_50680145_50681409_50681515_50681931_50682091_50682730
ES.35017.18	chr9	+	3220	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	9	0	intron_retention	FALSE	canonical	3	73	junction_3	7.1336448530109	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679559	50683969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50679987_50681614_50681931_50682091_50682730
ES.35017.19	chr9	+	1228	3	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	16	-333	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTATTCTCTGTATCC	NA	False	NA	NA	False	AATAGA	-8	NA	50679566	50683610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50681931_50682091_50682730
ES.35017.2	chr9	+	3298	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	3	-643	1	643	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCCCTTCAGACTGGT	NA	False	NA	NA	False	NA	NA	NA	50679538	50685291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ES.35017.20	chr9	+	2219	3	FSM	ENSMUSG00000037845.15	ENSMUST00000176619.2	2527	3	308	0	101	0	multi-exon	FALSE	canonical	3	72	junction_1	0.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679845	50683969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50680145_50681409_50682091_50682730
ES.35017.21	chr9	+	2714	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	273	-114	-13	100	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTAGTCTGAGGCCATT	NA	False	NA	138	True	AATAGA	-20	NA	50686591	50754942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.22	chr9	+	2691	16	NNC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	-12	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.7092643204116	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTTTAATGTTTCA	NA	False	NA	31	True	TTTAAA	-38	NA	50686592	50754835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50686819_50687198_50687284_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.23	chr9	+	1988	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	-10	552	-10	19	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTATGTCAAAGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	50686594	50754290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.25	chr9	+	2570	14	NIC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	-6	94	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	54.0913100459326	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTAAAGTAGTCTGAG	NA	False	NA	132	True	AATAGA	-14	NA	50686598	50754936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50754033
ES.35017.26	chr9	+	3353	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	-6	-817	-6	817	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGAATGAACCCTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	50686598	50755659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.27	chr9	+	6505	28	Fusion	ENSMUSG00000032058.15_ENSMUSG00000032059.14	novel	2530	14	NA	NA	-6	-184	multi-exon	FALSE	canonical	0	0	junction_14	207.232843205789	633	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	NA	False	NA	14	True	ATTAAA	-20	NA	50686598	50792547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033_50755728_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.28	chr9	+	5186	15	FSM	ENSMUSG00000032058.15_ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	280	-2593	-6	2579	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGGTTTGGTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	50686598	50757421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.29	chr9	+	3417	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	286	-830	0	816	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGAATGAACCCTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	50686604	50755658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.3	chr9	+	1782	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	-6	-480	intron_retention	FALSE	canonical	3	72	junction_2	2.62466929133727	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGCATCAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	50679544	50683463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50679987_50680145_50681409_50682091_50682730
ES.35017.30	chr9	+	5045	15	FSM	ENSMUSG00000032058.15_ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	286	-2458	0	2444	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTTGAGACAGGGTT	NA	False	NA	NA	False	AAGAAA	-24	NA	50686604	50757286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.31	chr9	+	2516	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	3	11	3	3	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGATTTTTTTAATGT	NA	False	NA	27	True	TTTAAA	-34	NA	50686607	50754831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.32	chr9	+	2053	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	290	530	4	27	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAAAGTCTAATCAAAG	NA	False	NA	NA	False	NA	NA	NA	50686608	50754298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.33	chr9	+	6076	15	FSM	ENSMUSG00000032058.15_ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	296	-3499	10	3485	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGGCAGCTCTTGCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	50686614	50758327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.34	chr9	+	2582	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	298	-7	12	7	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTTTAATGTTTCA	NA	False	NA	31	True	TTTAAA	-38	NA	50686616	50754835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.35	chr9	+	4334	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	298	-1759	12	1745	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCGTGACTCTGAGTA	NA	False	NA	NA	False	NA	NA	NA	50686616	50756587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.36	chr9	+	3733	13	ISM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	298	32638	12	21375	5prime_fragment	FALSE	canonical	3	151	junction_3	29.1874925648337	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTTACTGTACTATA	NA	False	NA	NA	False	AATAAA	-19	NA	50686616	50722190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976
ES.35017.37	chr9	+	2371	13	NIC	ENSMUSG00000032059.14	novel	2530	14	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	62.9101541883343	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTAAGATTTTTTT	NA	False	NA	22	True	TTTAAA	-29	NA	50686616	50754826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50754033
ES.35017.38	chr9	+	1905	14	NIC	ENSMUSG00000032059.14	novel	2873	15	NA	NA	12	18	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	54.0913100459326	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTCTATGTCAAAGTC	NA	False	NA	NA	False	AATAAA	-43	NA	50686616	50754289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50754033
ES.35017.39	chr9	+	2832	15	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-14	7	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	50.3522794004038	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTTTTAATGTTTCA	NA	False	NA	31	True	TTTAAA	-38	NA	50686831	50754835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.4	chr9	+	3613	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	-6	646	intron_retention	FALSE	canonical	3	72	junction_2	2.62466929133727	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTTCAGACTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	50679544	50685294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50679987_50680145_50681409_50682091_50682730
ES.35017.40	chr9	+	2861	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-13	94	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTAAAGTAGTCTGAG	NA	False	NA	132	True	AATAGA	-14	NA	50686832	50754936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.41	chr9	+	3927	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-6	1167	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACGATTTGATCATCTT	NA	False	NA	NA	False	NA	NA	NA	50686839	50756009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.42	chr9	+	2743	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTAAGATTTTTTTAA	NA	False	NA	24	True	TTTAAA	-31	NA	50686842	50754828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.43	chr9	+	3561	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	7	814	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGTTGAATGAACCCT	NA	False	NA	NA	False	AGTAAA	-14	NA	50686852	50755656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.44	chr9	+	6229	14	Fusion	ENSMUSG00000032058.15_ENSMUSG00000032059.14	novel	463	5	NA	NA	8	3483	multi-exon	FALSE	canonical	3	22	junction_1	59.440487865033	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAACAGGCAGCTCTTGC	NA	False	NA	NA	False	AGTAAA	-16	NA	50686853	50758325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.45	chr9	+	2607	13	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	23	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	75.7423905235517	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAATGTTTCAGTCTGC	NA	False	NA	37	True	TTTAAA	-44	NA	50686868	50754841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.46	chr9	+	5305	14	Fusion	ENSMUSG00000032058.15_ENSMUSG00000032059.14	novel	463	5	NA	NA	28	2579	multi-exon	FALSE	canonical	3	22	junction_1	59.440487865033	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGGTTTGGTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	50686873	50757421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.47	chr9	+	3654	1	Intergenic	novelGene_28418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTCTGAGGGCTTACTT	577	False	NA	NA	False	ATTAAA	-29	NA	50757011	50760665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_50757000_50760700
ES.35017.48	chr9	+	3933	1	Intergenic	novelGene_28419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGGTCTCTTAAGGGG	674	False	NA	NA	False	AATAAA	-17	NA	50757108	50761041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_50757100_50761000
ES.35017.49	chr9	+	3563	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	-317	184	-304	-184	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	NA	False	NA	14	True	ATTAAA	-20	NA	50767919	50792547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.5	chr9	+	3971	1	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	-3	-425	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCTATGGTATTTCT	NA	False	NA	NA	False	TATAAA	-18	NA	50679547	50683518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679500_50683500
ES.35017.50	chr9	+	3252	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-12	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.590889609559	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGTGTAAATGCTTT	NA	False	NA	9	True	ATTAAA	-15	NA	50768211	50792542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769149_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.51	chr9	+	2308	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	5	1117	5	-93	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATCTGCTTGGAGCT	-8	True	NA	NA	False	AGTAAA	-17	NA	50768241	50791614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.53	chr9	+	4043	13	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	6	-184	intron_retention	FALSE	canonical	3	496	junction_12	54.6015872785154	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	-7	True	NA	14	True	ATTAAA	-20	NA	50768242	50792547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509
ES.35017.55	chr9	+	3040	13	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-9	-187	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	162.095308040945	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGTAAATGCTTTTA	-2	True	NA	11	True	ATTAAA	-17	NA	50768247	50792544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50768399_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.56	chr9	+	3990	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	11	-571	-9	571	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACCAGACTGTCTCA	-2	True	NA	NA	False	NA	NA	NA	50768247	50793302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.57	chr9	+	3171	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-8	-187	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	154.614728553635	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGTAAATGCTTTTA	-1	True	NA	11	True	ATTAAA	-17	NA	50768248	50792544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791198
ES.35017.58	chr9	+	2583	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-8	-193	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_14	155.100823034962	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	-1	True	NA	5	True	ATTAAA	-11	NA	50768248	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791780
ES.35017.59	chr9	+	3169	14	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-7	-187	combination_of_known_splicesites	FALSE	canonical	1	40	junction_10	146.885818876372	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGTAAATGCTTTTA	0	True	NA	11	True	ATTAAA	-17	NA	50768249	50792544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.6	chr9	+	1926	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	-3	-333	intron_retention	FALSE	canonical	3	72	junction_2	2.62466929133727	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTATTCTCTGTATCC	NA	False	NA	NA	False	AATAGA	-8	NA	50679547	50683610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50679756_50679987_50680145_50681409_50682091_50682730
ES.35017.60	chr9	+	3443	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	14	-27	-6	27	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGCAGGCTGTATTCC	1	True	NA	NA	False	NA	NA	NA	50768250	50792758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.61	chr9	+	3172	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-6	-193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	204.44025123867	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	1	True	NA	5	True	ATTAAA	-11	NA	50768250	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778236_50778625_50778653_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.62	chr9	+	3212	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-5	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	155.669718392788	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACCAAATTGTGTAAA	2	True	NA	3	True	ATTAAA	-9	NA	50768251	50792536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781529_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.63	chr9	+	2576	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	15	839	-5	185	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAGTTGTGGTTCTACT	2	True	NA	NA	False	AAGAAA	-14	NA	50768251	50791892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.64	chr9	+	4380	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	15	-965	-5	965	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGGAGTTCATTTTAG	2	True	NA	NA	False	ATTAAA	-12	NA	50768251	50793696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.65	chr9	+	3605	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	15	-190	-5	190	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCCCAGCCTTGTGCAT	2	True	NA	NA	False	AATAAA	-24	NA	50768251	50792921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.66	chr9	+	2637	11	NIC	ENSMUSG00000032058.15	novel	2303	15	NA	NA	1	-199	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	176.008550928641	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATAAAACCAAATTGTG	8	True	NA	-1	True	ATTAAA	-5	NA	50768257	50792532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50768399_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.68	chr9	+	2398	14	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	1	5590	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	202.449555408766	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGTACTGGTTTGAGGC	8	True	NA	NA	False	AATAAA	-23	NA	50768257	50811119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50789337_50789493_50789997_50790141_50790509_50790602_50810476
ES.35017.7	chr9	+	3920	18	Fusion	ENSMUSG00000037845.15_ENSMUSG00000032059.14	novel	463	5	NA	NA	1	809	multi-exon	FALSE	canonical	0	0	junction_4	60.6152424102779	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATGTAGTTGAATGA	NA	False	NA	NA	False	AGTAAA	-9	NA	50679551	50755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ES.35017.71	chr9	+	6629	14	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	0	-184	intron_retention	FALSE	canonical	3	496	junction_12	50.3776272311806	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	14	True	NA	14	True	ATTAAA	-20	NA	50768263	50792547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.73	chr9	+	2570	16	NNC	ENSMUSG00000032058.15	novel	2074	16	NA	NA	5	5592	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	199.967619600997	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTACTGGTTTGAGGCTT	21	True	NA	NA	False	AATAAA	-25	NA	50768270	50811121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50794773_50794896_50810476
ES.35017.74	chr9	+	3197	15	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	5	-193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.730749457294	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	21	True	NA	5	True	ATTAAA	-11	NA	50768270	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778133_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.77	chr9	+	3338	16	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	6	-184	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	195.3755358278	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	22	False	NA	14	True	ATTAAA	-20	NA	50768271	50792547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772580_50772708_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.78	chr9	+	3291	16	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-6	-193	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	198.164196788645	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	23	False	NA	5	True	ATTAAA	-11	NA	50768272	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772568_50772659_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.79	chr9	+	3070	14	FSM	ENSMUSG00000032058.15	ENSMUST00000175645.8	1931	14	16	-1155	-6	-189	multi-exon	FALSE	canonical	0	0	junction_8	160.495165736704	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGTGTAAATGCTTT	23	False	NA	9	True	ATTAAA	-15	NA	50768272	50792542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.8	chr9	+	1511	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	16	1131	1	-426	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGCCTATGGTATTTC	NA	False	NA	NA	False	TATAAA	-17	NA	50679551	50683517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ES.35017.80	chr9	+	3509	16	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	-6	66902	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.141889952451	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGCCCAAATTATATTG	23	False	NA	NA	False	AAGAAA	-7	NA	50768272	50872431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138_50792924_50814970_50815017_50851418_50851471_50872414
ES.35017.81	chr9	+	3742	14	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	36	189	-6	-189	intron_retention	FALSE	canonical	3	496	junction_13	53.1480014598065	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTGTGTAAATGCTTT	23	False	NA	9	True	ATTAAA	-15	NA	50768272	50792542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509
ES.35017.85	chr9	+	3380	13	NNC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	3	190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.657268816026	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCCCAGCCTTGTGCAT	32	False	NA	NA	False	AATAAA	-24	NA	50768281	50792921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50768399_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790599_50791138
ES.35017.86	chr9	+	3394	13	NNC	ENSMUSG00000032058.15	novel	2303	15	NA	NA	3918	-193	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	156.570249586425	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	3947	False	NA	5	True	ATTAAA	-11	NA	50772196	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50772708_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.87	chr9	+	1823	12	NNC	ENSMUSG00000032058.15	novel	1890	14	NA	NA	4626	-95	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	167.696893035871	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATATCTGCTTGGAG	4655	False	NA	NA	False	AGTAAA	-15	NA	50772904	50791612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791198
ES.35017.88	chr9	+	2193	7	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	10693	193	-2454	-193	3prime_fragment	FALSE	canonical	3	496	junction_5	62.451091975152	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	3552	False	NA	5	True	ATTAAA	-11	NA	50778929	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ES.35017.89	chr9	+	8869	2	NNC	ENSMUSG00000032058.15	novel	721	2	NA	NA	-832	-193	intron_retention	TRUE	canonical	0	0	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	8102	False	NA	5	True	ATTAAA	-11	NA	50783479	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_50786291_50786480
ES.35017.9	chr9	+	2638	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	17	3	2	-3	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	50679552	50684645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ES.35017.90	chr9	+	4498	2	NIC	ENSMUSG00000032058.15	novel	907	7	NA	NA	-1713	-193	intron_retention	FALSE	canonical	3	496	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATTGTGTAAATG	NA	False	NA	5	True	ATTAAA	-11	NA	50787671	50792538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_50790141_50790509
ES.35017.91	chr9	+	175	1	Intergenic	novelGene_28420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAATCACA	NA	False	NA	NA	False	NA	NA	NA	50827153	50827328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_50827200_50827300
ES.35018.1	chr9	-	3204	5	NNC	ENSMUSG00000037971.11	novel	2082	4	NA	NA	-6	1452	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.8857705285386	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATGATGTAAGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	50679475	50672675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50673923_50673975_50675317_50675523_50675591_50675995_50676227_50679157
ES.35018.2	chr9	-	1269	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	299	514	7	359	multi-exon	FALSE	canonical	3	19	junction_2	3.74165738677394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCCCTTAGTCATG	NA	False	NA	NA	False	NA	NA	NA	50679453	50674641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ES.35018.3	chr9	-	1118	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	65	899	65	0	multi-exon	FALSE	canonical	3	19	junction_2	3.74165738677394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTCTATTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	50679687	50675026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ES.35019.1	chr9	-	166	1	Intergenic	novelGene_28417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50704563	50704397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50704400_50704600
ES.3502.1	chr10	-	169	1	Intergenic	novelGene_2687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAATCAGTTTACCG	NA	False	NA	NA	False	NA	NA	NA	85765944	85765775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_85765800_85765900
ES.35020.1	chr9	-	9266	15	NIC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	-6	3158	intron_retention	FALSE	canonical	3	21	junction_1	10.4383515783609	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTGATATGAATATCAG	NA	False	NA	1	True	AATAAA	-21	NA	50920332	50800942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.10	chr9	-	6668	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	-2	3151	intron_retention	FALSE	canonical	0	0	junction_1	14.2663551367856	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGCCTGGTGATATGA	NA	False	NA	-6	True	AATAAA	-14	NA	50920286	50800949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50804742_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.11	chr9	-	4267	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-136	-24	1	24	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTATGGTCTTGTTATC	NA	False	NA	NA	False	AAAAAG	-30	NA	50920372	50804076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.12	chr9	-	5764	18	NNC	ENSMUSG00000037112.17	novel	3576	17	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	20.4543546179627	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920347	50804100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50804690_50805257_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50863267_50865457_50906907_50906972_50909799_50909917_50920040
ES.35020.13	chr9	-	4158	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	11	0	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920362	50804100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.14	chr9	-	5390	15	NNC	ENSMUSG00000037112.17	novel	5369	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	11	junction_7	12.2017479510611	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920332	50804100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.15	chr9	-	3325	15	NIC	ENSMUSG00000037112.17	novel	3552	16	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	15.9624879141117	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGGTACTCTTTTA	NA	False	NA	NA	False	AAAAAG	-5	NA	50920300	50804101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.16	chr9	-	3416	16	NNC	ENSMUSG00000037112.17	novel	3552	16	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.4907633415988	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATGTGTGGTACTCTTT	NA	False	NA	NA	False	AAAAAG	-3	NA	50920315	50804103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.17	chr9	-	3524	16	FSM	ENSMUSG00000037112.17	ENSMUST00000041375.11	3552	16	22	6	22	-6	multi-exon	FALSE	canonical	2	11	junction_1	12.14907403879	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAATATGTGTGGTACTC	NA	False	NA	NA	False	NA	NA	NA	50920351	50804106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.18	chr9	-	5489	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	-131	11	6	-11	multi-exon	FALSE	canonical	3	33	junction_7	8.64875831597596	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCAATATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	50920367	50804111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.19	chr9	-	3546	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-99	660	-9	-660	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTGCTCATTTCAGG	NA	False	NA	NA	False	AATGAA	-21	NA	50920335	50804760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.2	chr9	-	8482	14	NIC	ENSMUSG00000037112.17	novel	5369	15	NA	NA	-19	3157	intron_retention	FALSE	canonical	2	4	junction_7	13.8367489426446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920345	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.20	chr9	-	4135	15	NNC	ENSMUSG00000037112.17	novel	5369	15	NA	NA	7	-1289	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	12.2017479510611	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTAGAGTGGCTTGTCC	NA	False	NA	NA	False	TATAAA	-14	NA	50920366	50805389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.21	chr9	-	176	1	Intergenic	novelGene_28421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGGATTTGT	NA	False	NA	NA	False	NA	NA	NA	50839866	50839690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_50839700_50839900
ES.35020.22	chr9	-	3951	3	FSM	ENSMUSG00000037112.17	ENSMUST00000176327.2	476	3	-25	-3450	-10	3450	multi-exon	FALSE	canonical	3	45	junction_2	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCATTAAACGTTTAT	NA	False	NA	NA	False	NA	NA	NA	50920336	50903433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50906972_50909799_50909917_50920040
ES.35020.3	chr9	-	6691	16	FSM	ENSMUSG00000037112.17	ENSMUST00000041375.11	3552	16	18	-3157	18	3157	multi-exon	FALSE	canonical	2	11	junction_1	12.14907403879	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920355	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.4	chr9	-	7400	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	-136	-3157	1	3157	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920372	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.5	chr9	-	8639	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	-113	-3157	-23	3157	multi-exon	FALSE	canonical	3	33	junction_7	8.64875831597596	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920349	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.6	chr9	-	7306	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	20	3157	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920353	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.7	chr9	-	8554	15	NNC	ENSMUSG00000037112.17	novel	5369	15	NA	NA	-13	3157	intron_retention	FALSE	canonical	3	11	junction_7	12.2017479510611	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920339	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.8	chr9	-	6834	13	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	22	3157	intron_retention	FALSE	canonical	0	0	junction_9	18.5195092327584	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920351	50800943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35020.9	chr9	-	7217	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	4	3153	intron_retention	FALSE	canonical	1	1	junction_10	15.0937809120916	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGGTGATATGAAT	NA	False	NA	-4	True	AATAAA	-16	NA	50920322	50800947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826834_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ES.35021.1	chr9	-	2899	8	FSM	ENSMUSG00000060594.7	ENSMUST00000098782.4	1786	8	36	-1149	8	-991	multi-exon	FALSE	canonical	0	0	junction_1	0.832993127835043	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAATCGTTAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	50988358	50966930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ES.35022.1	chr9	+	178	1	Intergenic	novelGene_28422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTATCGAA	9968	False	NA	NA	False	NA	NA	NA	51666830	51667008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_51666800_51667000
ES.35023.1	chr9	+	7452	16	NNC	ENSMUSG00000053199.14	novel	7161	15	NA	NA	-53	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.61278905896872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	51676583	51765158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51676912_51697035_51697119_51727232_51727454_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751693_51751856_51754965_51755076_51757424_51757615_51758606_51758719_51759867
ES.35023.2	chr9	+	3842	15	FSM	ENSMUSG00000053199.14	ENSMUST00000065496.12	7161	15	-46	3365	-31	-160	multi-exon	FALSE	canonical	1	1	junction_3	2.39578711874977	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGATAACCCCATTTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	51676605	51761791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751693_51751856_51754965_51755076_51757424_51757615_51758606_51758719_51759867
ES.35023.3	chr9	+	6364	15	FSM	ENSMUSG00000053199.14	ENSMUST00000065496.12	7161	15	-15	812	0	-812	multi-exon	FALSE	canonical	1	1	junction_3	2.39578711874977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGTCCCACAGAGAAATA	NA	False	NA	NA	False	AATAAA	-17	NA	51676636	51764344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751693_51751856_51754965_51755076_51757424_51757615_51758606_51758719_51759867
ES.35023.4	chr9	+	7170	15	FSM	ENSMUSG00000053199.14	ENSMUST00000065496.12	7161	15	-12	3	3	-3	multi-exon	FALSE	canonical	1	1	junction_3	2.39578711874977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGCTTCAGTTTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	51676639	51765153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097_51750277_51751693_51751856_51754965_51755076_51757424_51757615_51758606_51758719_51759867
ES.35023.5	chr9	+	6148	10	ISM	ENSMUSG00000053199.14	ENSMUST00000065496.12	7161	15	1	10029	1	-4822	intron_retention	FALSE	canonical	1	1	junction_3	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCAGTTGTGTTTCT	NA	False	NA	NA	False	AATATA	-29	NA	51676652	51755127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_51676912_51697035_51697119_51727976_51728142_51732462_51732613_51736192_51736235_51737138_51737224_51738135_51738214_51740629_51740697_51742938_51743128_51750097
ES.35024.1	chr9	+	1758	3	Antisense	novelGene_ENSMUSG00000111357.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTCTCCTCAGTGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	51838513	51841625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_51838626_51839348_51839431_51840061
ES.35025.1	chr9	-	1229	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-75	-279	-65	279	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTAGCATCTTGTTT	962	False	NA	NA	False	AAGAAA	-4	NA	51874921	51854326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ES.35025.2	chr9	-	940	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-60	-5	-50	5	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTTTGGTGATTTTAG	977	False	NA	0	True	AATAAA	-22	NA	51874906	51854600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ES.35025.3	chr9	-	4295	3	ISM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	2653	0	2653	0	3prime_fragment	FALSE	canonical	3	440	junction_2	18.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	3690	False	NA	-5	True	AATAAA	-17	NA	51872193	51854605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_51854950_51859876_51860007_51868372
ES.35025.4	chr9	-	5895	4	NNC	ENSMUSG00000032051.10	novel	2759	4	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_2	206.948195342592	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCATGAGTGTGTTTGGT	1028	False	NA	-8	True	AATAAA	-14	NA	51874855	51854608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_51860007_51868372_51868498_51871052_51871140_51874570
ES.35025.5	chr9	-	768	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-75	182	-65	-120	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTCTTAGTATAATT	962	False	NA	NA	False	AATAAA	-37	NA	51874921	51854787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ES.35025.6	chr9	-	2018	1	Genic_Genomic	ENSMUSG00000032051.10	novel	NA	NA	NA	NA	-66	-16625	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTACTCTGATATTTTGT	961	False	NA	NA	False	NA	NA	NA	51874922	51872904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_51872900_51874900
ES.35026.1	chr9	+	160	1	Intergenic	novelGene_28423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAATCTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	51904722	51904882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_51904700_51904900
ES.35027.1	chr9	+	4150	14	FSM	ENSMUSG00000032050.19	ENSMUST00000163153.9	4131	14	-17	-2	-17	2	multi-exon	FALSE	canonical	0	0	junction_1	252.321974267452	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCGCTGTTGTTATTTA	NA	False	NA	23	True	AATAAA	-23	NA	51958455	52000037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51958536_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.10	chr9	+	3797	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-114	697	-114	-697	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAACTTGTTTTTTGTGC	NA	False	NA	21	True	ATTAAA	-37	NA	51959300	51999332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.13	chr9	+	7388	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-97	-2911	-97	2905	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTAGATCATATGATAGT	NA	False	NA	NA	False	NA	NA	NA	51959317	52002940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.15	chr9	+	4212	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	239.983135502151	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGAGGTCCGCTGTTG	NA	False	NA	16	True	AATAAA	-16	NA	51959544	52000030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976983_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.16	chr9	+	4190	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	252.321974267452	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959547	52000029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959666_51972121_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.18	chr9	+	7056	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	133	-2809	-23	2803	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATCCATTTATTGGTC	NA	False	NA	NA	False	NA	NA	NA	51959547	52002838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.19	chr9	+	4231	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	252.770494870195	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959554	52000029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992327_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.2	chr9	+	4715	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-322	-13	-322	7	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTTGTTATTTAACGTG	NA	False	NA	28	True	AATAAA	-28	NA	51959092	52000042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.21	chr9	+	4929	13	NIC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	758	junction_12	85.0155214586659	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959554	52000029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.22	chr9	+	6801	13	NIC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	758	junction_12	84.726356911858	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGGAGGTCCGCTG	NA	False	NA	13	True	AATAAA	-13	NA	51959558	52000027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51996646_51997614
ES.35027.24	chr9	+	4158	13	NIC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	258.660760241844	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTTGGAGGTCCGCTGT	NA	False	NA	14	True	AATAAA	-14	NA	51959563	52000028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_51959733_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.25	chr9	+	3979	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	150	251	-6	-251	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATAGCTGTATGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	51959564	51999778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.28	chr9	+	4223	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	252.840525551081	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCGCTGTTGTTATTTA	NA	False	NA	23	True	AATAAA	-23	NA	51959569	52000037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996412_51996646_51997614
ES.35027.29	chr9	+	3555	16	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	313.071550217447	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959572	52000029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51998307_51998820_51999501_51999653
ES.35027.3	chr9	+	4185	14	NNC	ENSMUSG00000032050.19	novel	4131	14	NA	NA	-315	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	252.0714184512	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGGTCCGCTGTTGTTA	NA	False	NA	19	True	AATAAA	-19	NA	51959099	52000033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959219_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.30	chr9	+	4095	15	NNC	ENSMUSG00000032050.19	novel	2163	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	243.79348905605	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTCCGCTGTTGTTAT	NA	False	NA	20	True	AATAAA	-20	NA	51959572	52000034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51999774_51999905
ES.35027.32	chr9	+	4097	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	249.024701134542	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTTGGAGGTCCGCTGT	NA	False	NA	14	True	AATAAA	-14	NA	51959572	52000028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51977068_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.34	chr9	+	4195	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	252.955289919434	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGAGGTCCGCTGTTG	NA	False	NA	16	True	AATAAA	-16	NA	51959597	52000030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979581_51980113_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.35	chr9	+	4171	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	247.923542327542	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGGAGGTCCGCTG	NA	False	NA	13	True	AATAAA	-13	NA	51959598	52000027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979452_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.37	chr9	+	4184	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	252.955289919434	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959600	52000029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979581_51980120_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.38	chr9	+	169	1	Intergenic	novelGene_28424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	751	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAAAAACTAAACAAAAAG	5869	False	NA	NA	False	NA	NA	NA	51968780	51968949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_51968800_51968900
ES.35027.4	chr9	+	2589	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-153	1944	-153	-1944	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTGTGTATGTGCTT	NA	False	NA	NA	False	NA	NA	NA	51959261	51998085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.5	chr9	+	3125	12	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-152	4943	-152	-4943	5prime_fragment	FALSE	canonical	3	794	junction_8	76.668654902953	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTTACTGTATAAATGG	NA	False	NA	NA	False	NA	NA	NA	51959262	51995086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742
ES.35027.6	chr9	+	2553	13	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	-139	2935	-139	-2935	5prime_fragment	FALSE	canonical	3	794	junction_8	80.0005208316379	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAATAGTCTCTTTC	NA	False	NA	NA	False	ATTAAA	-29	NA	51959275	51997094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402
ES.35027.8	chr9	+	4384	14	NNC	ENSMUSG00000032050.19	novel	4380	14	NA	NA	-133	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	330.656653471856	911	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGAGGTCCGCTGTTG	NA	False	NA	16	True	AATAAA	-16	NA	51959281	52000030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51977068_51977220_51978660_51978745_51979429_51979577_51980106_51980198_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35027.9	chr9	+	4644	15	NNC	ENSMUSG00000032050.19	novel	2163	15	NA	NA	-117	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	317.000168994998	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTTGGAGGTCCGCTG	NA	False	NA	13	True	AATAAA	-13	NA	51959297	52000027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_51959733_51963918_51964068_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ES.35028.1	chr9	-	2034	2	Genic_Genomic	ENSMUSG00000098076.2	novel	1008	1	NA	NA	-45697	627	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAACAAACCCCCACAC	3334	False	NA	NA	False	NA	NA	NA	51960278	51912946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_51914627_51959924
ES.35028.2	chr9	-	2017	3	Genic_Genomic	ENSMUSG00000098076.2	novel	1008	1	NA	NA	-45624	564	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	3407	False	NA	NA	False	NA	NA	NA	51960205	51913009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_51914627_51932310_51932430_51959924
ES.35028.3	chr9	-	1522	4	Genic_Genomic	ENSMUSG00000098076.2	novel	1008	1	NA	NA	-45427	203	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATCTCATAACTGTAT	3604	False	NA	NA	False	AATAAA	-17	NA	51960008	51913370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_51914627_51915414_51915478_51932310_51932430_51959924
ES.35029.1	chr9	+	5137	1	Intergenic	novelGene_28426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTACGTCTGTCTCCT	3812	False	NA	NA	False	NA	NA	NA	52073562	52078699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_52073600_52078700
ES.3503.1	chr10	+	1888	1	Intergenic	novelGene_2688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85765998	85767886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_85766000_85767900
ES.35030.1	chr9	-	3451	1	Genic_Genomic	ENSMUSG00000035164.9	novel	NA	NA	NA	NA	55092	1775	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTAAGAGTGTTTTCTT	NA	False	NA	NA	False	ATTAAA	-38	NA	52024319	52020868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_52020900_52024300
ES.35030.2	chr9	-	3811	1	Genic_Genomic	ENSMUSG00000035164.9	novel	NA	NA	NA	NA	54599	1642	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTGGCTTTCTCAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	52024812	52021001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_52021000_52024800
ES.35030.3	chr9	-	5939	4	ISM	ENSMUSG00000035164.9	ENSMUST00000213645.2	6764	6	41868	4	41407	-4	3prime_fragment	TRUE	canonical	2	9	junction_1	2.16024689946929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCAACAGGCCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	52038004	52022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862
ES.35030.4	chr9	-	6308	6	FSM	ENSMUSG00000035164.9	ENSMUST00000213645.2	6764	6	-179	635	-179	6	multi-exon	FALSE	canonical	2	2	junction_5	3.87814388593306	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTATTTTTTAGTTTG	NA	False	NA	NA	False	TATAAA	-13	NA	52080051	52023278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52079801
ES.35030.5	chr9	-	6145	6	NNC	ENSMUSG00000035164.9	novel	6764	6	NA	NA	-326	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	2.0976176963403	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTATGTTGTATTTT	NA	False	NA	NA	False	TATAAA	-5	NA	52080198	52023286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52080103
ES.35030.6	chr9	-	4555	6	NNC	ENSMUSG00000035164.9	novel	6764	6	NA	NA	-367	-1633	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	2.0976176963403	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCCAAGCATCTT	NA	False	NA	NA	False	AATAAA	-18	NA	52080239	52024917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52080103
ES.35030.7	chr9	-	2335	6	NNC	ENSMUSG00000035164.9	novel	6764	6	NA	NA	-328	-3814	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	2.0976176963403	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGACTCTATGATAGTTC	NA	False	NA	NA	False	AATAGA	-14	NA	52080200	52027098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52080103
ES.35030.8	chr9	-	2894	3	ISM	ENSMUSG00000035164.9	ENSMUST00000213645.2	6764	6	36	13252	36	-12611	5prime_fragment	FALSE	canonical	2	2	junction_2	3	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAACTCAGTACCTAT	NA	False	NA	NA	False	NA	NA	NA	52079836	52035895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_52038003_52054974_52055727_52079801
ES.35030.9	chr9	-	179	1	Intergenic	novelGene_28425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	52062842	52062663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_52062700_52062800
ES.35031.1	chr9	+	1520	2	Intergenic	novelGene_28427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAATAGAGATGTACGA	NA	False	NA	NA	False	AATAAA	-14	NA	52714627	52726687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_52714783_52725322
ES.35031.2	chr9	+	1090	1	Intergenic	novelGene_28429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52725191	52726281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_52725200_52726300
ES.35032.1	chr9	-	5863	1	Intergenic	novelGene_28428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	52730800	52724937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_52724900_52730800
ES.35033.1	chr9	+	182	1	Intergenic	novelGene_28430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTTGACTTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	52938127	52938309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_52938100_52938300
ES.35034.1	chr9	+	175	1	Intergenic	novelGene_28431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	53067417	53067592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53067400_53067600
ES.35035.1	chr9	+	3562	1	Intergenic	novelGene_28432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAAAGCCCCCTGACA	NA	False	NA	NA	False	NA	NA	NA	53097391	53100953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53097400_53101000
ES.35036.1	chr9	-	3304	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-40	152953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.7289592748099	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACAATTCTCTTACAAA	NA	False	NA	NA	False	NA	NA	NA	53159393	52856981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_52857746_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.10	chr9	-	6894	7	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	35272	-2	35272	2	intron_retention	FALSE	canonical	3	313	junction_5	26.2741951985847	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTTTTTATTGTATCC	NA	False	NA	-1	True	AATAAA	-19	NA	53124081	53009932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765
ES.35036.11	chr9	-	3212	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	85.3287961957018	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159412	53009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140577_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.13	chr9	-	3148	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	85.5547741342506	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159421	53009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147747_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.14	chr9	-	3158	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.6597574542327	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159391	53009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115823_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.15	chr9	-	3084	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	85.3287961957018	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159390	53009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140471_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.2	chr9	-	3083	18	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-33	72604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.7289592748099	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGGACTTCTCATCTA	NA	False	NA	NA	False	NA	NA	NA	53159386	52937330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_52937881_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.20	chr9	-	3275	19	NNC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.128652796359	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159389	53009934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53010563_53028452_53028590_53060802_53060860_53065970_53066082_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.24	chr9	-	2174	12	NIC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-38	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	94.7728035752909	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATTGTTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	53159391	53009938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53010563_53028452_53028590_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.26	chr9	-	3038	17	NIC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	86.4224498828285	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTATTGTTTTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	53159369	53009938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.28	chr9	-	2985	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-41	184	-41	-184	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTTGCTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	53159394	53010118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.3	chr9	-	4817	2	ISM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	130864	-4152	130864	4152	3prime_fragment	FALSE	canonical	3	364	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCTACTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	53028489	53005782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53010563_53028452
ES.35036.4	chr9	-	5294	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-46	-2120	-46	2120	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATATAACTACTGCATAA	NA	False	NA	NA	False	ATTAAA	-14	NA	53159399	53007814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.5	chr9	-	4394	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-78	-1188	-78	1188	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	53159431	53008746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.6	chr9	-	3623	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-54	-441	-54	441	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATAGATGGTAACT	NA	False	NA	NA	False	AATAAA	-15	NA	53159407	53009493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.7	chr9	-	3392	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-81	-183	-81	183	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTCTTCATGTGCTCTT	NA	False	NA	NA	False	TATAAA	-18	NA	53159434	53009751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35036.9	chr9	-	3295	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	-88	-79	-88	79	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTTTTGTATTG	NA	False	NA	76	True	ATTAAA	-16	NA	53159441	53009855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ES.35037.1	chr9	-	175	1	Intergenic	novelGene_28433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGAAGCAAGCAGGGCCA	NA	False	NA	NA	False	NA	NA	NA	53187079	53186904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53186900_53187100
ES.35038.1	chr9	-	174	1	Intergenic	novelGene_28434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGGCCTTTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	53190180	53190006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53190000_53190200
ES.35039.1	chr9	+	7392	6	FSM	ENSMUSG00000034584.4	ENSMUST00000051014.2	5957	6	-152	-1283	-152	1283	multi-exon	FALSE	canonical	0	0	junction_3	2.13541565040626	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTCTGTAATTGCAT	NA	False	NA	NA	False	NA	NA	NA	53212817	53290097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53213152_53249131_53249293_53251641_53251799_53264453_53264503_53278376_53278513_53283542
ES.35039.2	chr9	+	6945	4	NIC	ENSMUSG00000034584.4	novel	2315	3	NA	NA	77	1283	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	2.05480466765633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTCTGTAATTGCAT	NA	False	NA	NA	False	NA	NA	NA	53252565	53290097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53252771_53264453_53264503_53278376_53278513_53283542
ES.3504.1	chr10	-	2015	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	2	-8	2	8	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCCTGTGTCAGTTTT	NA	False	NA	-4	True	ATTAAA	-25	NA	85793685	85774492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.10	chr10	-	3913	11	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	23	0	intron_retention	FALSE	canonical	2	40	junction_5	432.666846430368	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793664	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782109_85782215_85783040_85783198_85785329_85785487_85787218_85789369_85791582_85791662_85793478
ES.3504.11	chr10	-	6085	10	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	38	0	intron_retention	FALSE	canonical	3	1317	junction_1	102.966493411362	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793649	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85785487_85787218_85789369_85791582_85791662_85793478
ES.3504.12	chr10	-	1965	12	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	420.788064280966	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793649	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785335_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.14	chr10	-	1949	12	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_5	414.16954646997	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793682	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782109_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.15	chr10	-	3807	4	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	9530	0	intron_retention	FALSE	canonical	3	1317	junction_1	34.1207007873845	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85782113	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85778463_85779072_85779262_85779678
ES.3504.16	chr10	-	955	6	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	583.430201480863	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793632	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779097_85791598_85791662_85793478
ES.3504.17	chr10	-	4112	11	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	29	0	intron_retention	FALSE	canonical	3	1317	junction_1	97.694626259585	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793658	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.2	chr10	-	1141	6	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	4	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	545.55344376147	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTCCTGTGTCAGTTT	NA	False	NA	-5	True	ATTAAA	-24	NA	85793683	85774493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779756_85793529
ES.3504.20	chr10	-	1971	12	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	425.377479422689	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTCTTCTCTTCCTGT	NA	False	NA	-13	True	ATTAAA	-16	NA	85793657	85774501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779848_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.21	chr10	-	5539	9	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	36	-2	intron_retention	FALSE	canonical	3	1317	junction_1	107.771459579983	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTCTTCTCTTCCTG	NA	False	NA	-14	True	ATTAAA	-15	NA	85793651	85774502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85779262_85779678_85779855_85782054_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.22	chr10	-	1918	11	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_9	434.086961333786	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTCTTCTCTTCCTG	NA	False	NA	-14	True	ATTAAA	-15	NA	85793666	85774502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85791582_85791662_85793478
ES.3504.23	chr10	-	1956	12	NNC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	35	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	424.044243754301	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAATGTTTCCTTTCT	NA	False	NA	-24	True	ATTAAA	-5	NA	85793652	85774512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789306_85789369_85791582_85791662_85793478
ES.3504.24	chr10	-	2568	5	ISM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	32	8842	32	1381	5prime_fragment	FALSE	canonical	3	1399	junction_1	102.60726095165	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAGGGCTTAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	85793655	85783342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.25	chr10	-	8483	2	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	41	1377	intron_retention	FALSE	canonical	3	1656	junction_1	0	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAGAGGGCTTAAAC	NA	False	NA	NA	False	NA	NA	NA	85793646	85783346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85791662_85793478
ES.3504.26	chr10	-	4270	4	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	28	1347	intron_retention	FALSE	canonical	3	1432	junction_1	91.7205902001653	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-26	NA	85793659	85783376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.27	chr10	-	4516	4	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	30	1345	intron_retention	FALSE	canonical	3	1399	junction_1	105.965403159081	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	85793657	85783378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85785487_85787218_85789369_85791582_85791662_85793478
ES.3504.28	chr10	-	10267	1	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	42	1345	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	85793645	85783378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85783400_85793600
ES.3504.29	chr10	-	836	1	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	35	-8093	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAAGTTTCTGATAGG	NA	False	NA	NA	False	AATAAA	-21	NA	85793652	85792816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85792800_85793700
ES.3504.4	chr10	-	2135	6	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	8322	5	intron_retention	FALSE	canonical	3	1317	junction_1	34.7585960591046	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTTCCTGTGTCAGT	NA	False	NA	-7	True	ATTAAA	-22	NA	85783321	85774495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85779262_85779678_85779855_85782054_85782215_85783040
ES.3504.6	chr10	-	5837	10	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	38	2	intron_retention	FALSE	canonical	3	1317	junction_1	102.494564745986	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCTTCCTGTGTC	NA	False	NA	-10	True	ATTAAA	-19	NA	85793649	85774498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.8	chr10	-	1824	11	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	440.043918262712	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCTCTTCCTGTGT	NA	False	NA	-11	True	ATTAAA	-18	NA	85793658	85774499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ES.3504.9	chr10	-	3998	11	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1317	junction_1	101.515959336451	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793694	85774500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85789369_85791582_85791662_85793478
ES.35040.1	chr9	-	3888	1	Intergenic	novelGene_28435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	53256961	53253073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53253100_53257000
ES.35041.1	chr9	+	2103	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-58	1597	-58	504	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCAATTATGAAGGGCA	9214	False	NA	NA	False	GATAAA	-21	NA	53295266	53311570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.10	chr9	+	3403	8	NNC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	18	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.8183620456067	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAAAGGGAACTCCAT	9290	False	NA	NA	False	AATAAA	-13	NA	53295342	53313064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53295587_53299679_53299878_53301852_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.11	chr9	+	3412	8	NNC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	45	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6582516567037	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAAAGGGAACTCCAT	9317	False	NA	NA	False	AATAAA	-13	NA	53295369	53313064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53295587_53299761_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.12	chr9	+	3013	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	49	580	49	-580	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACTGGCCGTCACCCA	9321	False	NA	NA	False	AATAAA	-23	NA	53295373	53312587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.13	chr9	+	1565	6	NIC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	54	-1387	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	32.5907962467934	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTACAAATATCATCCTG	9326	False	NA	NA	False	NA	NA	NA	53295378	53309679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53307143_53307339_53309219
ES.35041.14	chr9	+	3096	7	NNC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	-2186	-92	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	38.3597734902361	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCCATGTACTTTAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	53299730	53313075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53299878_53301734_53302022_53303214_53303432_53305432_53305489_53307143_53307339_53309219_53309325_53310986
ES.35041.2	chr9	+	3695	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-54	1	-54	-1	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTTGCCTGCATAAATA	9218	False	NA	NA	False	NA	NA	NA	53295270	53313166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.5	chr9	+	1340	1	Genic_Genomic	ENSMUSG00000034487.5	novel	NA	NA	NA	NA	-26	-14428	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGATATGTGTGTGTTT	9246	False	NA	NA	False	AATAAA	-17	NA	53295298	53296638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_53295300_53296600
ES.35041.6	chr9	+	3554	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	-14	102	-14	-102	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAAGGGAACTCCATG	9258	False	NA	NA	False	AATAAA	-14	NA	53295310	53313065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.7	chr9	+	3634	9	NNC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	0	-93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5079131478194	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTCCATGTACTTTAAG	9272	False	NA	NA	False	AATAAA	-23	NA	53295324	53313074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53295587_53299352_53299438_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35041.8	chr9	+	3116	6	NIC	ENSMUSG00000034487.5	novel	3642	8	NA	NA	7	-105	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.9187973072596	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAGAAAGGGAACTCC	9279	False	NA	NA	False	AATAAA	-11	NA	53295331	53313062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53295587_53299679_53299878_53301734_53302022_53307143_53307339_53309219_53309325_53310986
ES.35041.9	chr9	+	3406	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	7	229	7	-229	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGAAGGGGAAAGAAAC	9279	False	NA	NA	False	NA	NA	NA	53295331	53312938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ES.35042.1	chr9	-	2263	1	Antisense	novelGene_ENSMUSG00000034487.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAATTATATAA	NA	False	NA	NA	False	NA	NA	NA	53295709	53293446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_53293400_53295700
ES.35043.1	chr9	+	177	1	Intergenic	novelGene_28436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAACTCTGCTTT	6661	False	NA	NA	False	NA	NA	NA	53374406	53374583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53374400_53374600
ES.35044.1	chr9	+	6690	33	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGAGAGATGGCTCC	7975	False	NA	NA	False	NA	NA	NA	53392036	53441838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53392044_53393592_53393744_53395372_53395545_53397308_53397402_53398110_53398238_53399195_53399368_53399846_53400020_53401408_53401610_53402212_53402336_53403536_53403671_53404339_53404583_53405906_53406080_53407149_53407321_53408428_53408554_53410156_53410287_53410420_53410497_53411970_53412130_53412219_53412303_53414244_53414443_53415243_53415426_53417841_53417935_53419079_53419204_53421462_53421589_53423003_53423230_53424404_53424496_53426451_53426657_53427508_53427876_53429801_53429970_53431291_53431458_53433349_53433585_53435646_53435817_53438476_53438632_53440167
ES.35044.2	chr9	+	6434	1	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	53419476	53425910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53419500_53425900
ES.35044.3	chr9	+	6942	1	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAATTACCTCTGAAGAA	NA	False	NA	NA	False	AAAACA	-26	NA	53419505	53426447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53419500_53426400
ES.35044.4	chr9	+	1490	1	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	53432197	53433687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53432200_53433700
ES.35044.5	chr9	+	3583	1	Antisense	novelGene_ENSMUSG00000034218.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTATACTTTTATCAC	NA	False	NA	NA	False	AATAAA	-14	NA	53439523	53443106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53439500_53443100
ES.35045.1	chr9	-	4116	10	NIC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	22	2352	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	18.773503787105	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTCATGTTCCTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	53364895	53348096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53364652_53364736_53364831
ES.35045.10	chr9	-	7593	23	NIC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	-14584	2024	intron_retention	FALSE	canonical	0	0	junction_13	13.4999234769793	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAACCGTATGTCCATT	NA	False	NA	-5	True	AATAAA	-24	NA	53379501	53348424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53375602_53376331_53376435_53376525_53376615_53379264
ES.35045.13	chr9	-	11802	62	NNC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	17	2016	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	19.0626063687385	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGACTATACAACCGTA	NA	False	NA	-13	True	AATAAA	-16	NA	53448023	53348432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367066_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.14	chr9	-	5673	31	NNC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	-30606	2015	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5573196556082	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGACTATACAACCGT	9013	False	NA	-14	True	AATAAA	-15	NA	53395523	53348433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53349580_53350666_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372
ES.35045.16	chr9	-	9018	46	NNC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	30978	2015	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.1344425175534	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGACTATACAACCGT	NA	False	NA	-14	True	AATAAA	-15	NA	53414288	53348433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365574_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244
ES.35045.18	chr9	-	11994	63	NNC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	7	2014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.0302896740445	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGACTATACAACCG	NA	False	NA	-15	True	AATAAA	-14	NA	53448033	53348434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408544_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.2	chr9	-	5027	18	NNC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	-6119	2031	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	18.1460815829922	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTATGTCCATTTTATGAA	NA	False	NA	2	True	AATAAA	-31	NA	53371036	53348417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365580_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012
ES.35045.20	chr9	-	3399	20	ISM	ENSMUSG00000034218.17	ENSMUST00000118282.9	9819	62	71406	0	-8943	0	3prime_fragment	FALSE	canonical	0	0	junction_13	14.1489895687704	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGCATGTTGAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	53373860	53350448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780
ES.35045.21	chr9	-	9768	63	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	-20	-30	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	18.3797169683776	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	2	True	ATTAAA	-16	NA	53448060	53350697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.23	chr9	-	9509	62	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	-27	-34	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	19.0626063687385	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTGTGTG	NA	False	NA	-2	True	ATTAAA	-12	NA	53448000	53350701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.24	chr9	-	155	1	Intergenic	novelGene_28437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATACAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	53389968	53389813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53389800_53390000
ES.35045.25	chr9	-	6352	12	NIC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	37283	-33757	intron_retention	FALSE	canonical	3	19	junction_8	8.1026472564208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGGAAAGAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	53407983	53390431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53391059_53391873_53392051_53393601_53393744_53395372_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53403669_53404337_53404585_53405911_53406082_53407151
ES.35045.26	chr9	-	2181	14	ISM	ENSMUSG00000034218.17	ENSMUST00000118282.9	9819	62	13834	60027	13834	22671	internal_fragment	FALSE	canonical	3	19	junction_8	5.88851052584758	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTCTCTGTAAGAAT	NA	False	NA	NA	False	AAGAAA	-1	NA	53431432	53410475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291
ES.35045.27	chr9	-	3198	14	ISM	ENSMUSG00000034218.17	ENSMUST00000232179.2	9787	64	40	70012	-27	12467	5prime_fragment	FALSE	canonical	3	19	junction_1	29.3493545991154	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAGAATATGAAATTAT	NA	False	NA	NA	False	AATAAA	-12	NA	53448000	53420679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.28	chr9	-	3690	13	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	7	11578	intron_retention	FALSE	canonical	3	27	junction_4	28.7889832324026	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGGTGTTCAAGTCTTT	NA	False	NA	NA	False	TTTAAA	-40	NA	53447966	53421568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.29	chr9	-	1962	10	ISM	ENSMUSG00000034218.17	ENSMUST00000232179.2	9787	64	-35	76722	-35	5757	5prime_fragment	FALSE	canonical	3	27	junction_1	30.3868067537765	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATCAATAATACTGA	NA	False	NA	NA	False	AATAAA	-22	NA	53448075	53427389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.3	chr9	-	12050	63	NIC	ENSMUSG00000034218.17	novel	9787	64	NA	NA	-23	2030	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	18.3797169683776	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTATGTCCATTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	53448063	53348418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.30	chr9	-	1452	9	ISM	ENSMUSG00000034218.17	ENSMUST00000232179.2	9787	64	8	79115	8	3364	5prime_fragment	FALSE	canonical	3	33	junction_1	29.3428015022424	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTGTCATTTCAATCA	NA	False	NA	NA	False	NA	NA	NA	53448032	53429782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.31	chr9	-	1298	2	Genic_Genomic	ENSMUSG00000034218.17	novel	9819	62	NA	NA	13554	2999	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTACTAAAAATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	53431712	53430147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_53430323_53430589
ES.35045.32	chr9	-	1160	7	FSM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-62	145	5	-145	multi-exon	FALSE	canonical	3	42	junction_1	25.1837690233655	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGGCATCAGTGTTCTG	NA	False	NA	NA	False	ATTAAA	-15	NA	53448035	53433291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.33	chr9	-	761	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	-50	5252	17	95	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACGACTCAGAGTTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	53448023	53438398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ES.35045.7	chr9	-	4929	17	NNC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	-3798	2026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.8412901472054	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCGTATGTCCATTTT	NA	False	NA	-3	True	AATAAA	-26	NA	53368715	53348422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352531_53352721_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677
ES.35045.8	chr9	-	5568	20	NNC	ENSMUSG00000034218.17	novel	9819	62	NA	NA	-10555	2024	intron_retention	FALSE	canonical	0	0	junction_12	14.324300875361	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAACCGTATGTCCATT	NA	False	NA	-5	True	AATAAA	-24	NA	53375472	53348424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364971_53365588_53365748_53366015_53366130_53367063_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452
ES.35046.1	chr9	+	7469	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-182	-1225	-182	1225	multi-exon	TRUE	canonical	3	111	junction_15	17.5635277962748	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCTTAATTGATACT	NA	False	NA	10	True	AATAAA	-23	NA	53448164	53486867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.10	chr9	+	5311	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-25	-1386	intron_retention	FALSE	non_canonical	0	0	junction_16	37.6973453143587	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCCCACACTGTCTTG	NA	False	NA	5	True	AATAGA	-15	NA	53448321	53484256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482478_53483870
ES.35046.11	chr9	+	4699	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-21	1384	-21	-1384	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCACACTGTCTTGAT	NA	False	NA	7	True	AATAGA	-17	NA	53448325	53484258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.14	chr9	+	7189	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-20	-1107	-20	1107	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTAGCTGTTATTCGT	NA	False	NA	NA	False	TATAAA	-22	NA	53448326	53486749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.15	chr9	+	5914	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTATGTGTGTTTTTAG	NA	False	NA	NA	False	TATAAA	-22	NA	53448327	53485646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.16	chr9	+	5900	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-10	-170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	36.5884244368102	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTGGATTTATATT	NA	False	NA	10	True	AATAAA	-18	NA	53448336	53485472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482477_53483870
ES.35046.17	chr9	+	4772	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-10	-168	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	37.6334604275238	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	12	True	AATAAA	-20	NA	53448336	53485474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53483870
ES.35046.18	chr9	+	5723	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-1	-169	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTTGGATTTATATTT	NA	False	NA	11	True	AATAAA	-19	NA	53448345	53485473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.19	chr9	+	5533	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-1	-359	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTTCAAGATGTAAATTA	NA	False	NA	NA	False	AATAAA	-28	NA	53448345	53485283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.20	chr9	+	5695	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	2	-359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.6045925229557	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTTCAAGATGTAAATTA	NA	False	NA	NA	False	AATAAA	-28	NA	53448348	53485283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465190_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.21	chr9	+	6298	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	2	-373	intron_retention	FALSE	canonical	3	111	junction_14	18.0917799013806	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAACAAAAACGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	53448348	53485269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.23	chr9	+	6064	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	2	-4	2	4	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTATGTGTGTTTTTAG	NA	False	NA	NA	False	TATAAA	-22	NA	53448348	53485646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.25	chr9	+	7276	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	9	-173	intron_retention	FALSE	canonical	0	0	junction_8	37.5960748449888	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCAGTTTGGATTTAT	NA	False	NA	7	True	AATAAA	-15	NA	53448355	53485469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466446_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346
ES.35046.26	chr9	+	5867	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	11	-173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	35.7933321969021	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCAGTTTGGATTTAT	NA	False	NA	7	True	AATAAA	-15	NA	53448357	53485469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478226_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.28	chr9	+	4493	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	12	-1386	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	32.2756740565161	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCCCACACTGTCTTG	NA	False	NA	5	True	AATAGA	-15	NA	53448358	53484256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.29	chr9	+	4567	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	12	-2898	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	37.055701315722	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCATGCCGGGCGGTGG	NA	False	NA	NA	False	AATAAA	-2	NA	53448358	53482744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462962_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346
ES.35046.3	chr9	+	6013	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-119	168	-119	-168	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	12	True	AATAAA	-20	NA	53448227	53485474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.30	chr9	+	7101	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	12	-418	intron_retention	FALSE	canonical	3	111	junction_14	17.2281337860489	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTTGTACTGGGCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	53448358	53485224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.31	chr9	+	5273	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	13	-359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.6401770789964	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTTCAAGATGTAAATTA	NA	False	NA	NA	False	AATAAA	-28	NA	53448359	53485283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474700_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.34	chr9	+	9155	15	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	14	-365	intron_retention	FALSE	canonical	3	111	junction_13	17.6016001127912	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACGTCTTCAAGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	53448360	53485277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346
ES.35046.37	chr9	+	5890	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	26	-168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.1254675157851	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	12	True	AATAAA	-20	NA	53448372	53485474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462962_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482478_53483870
ES.35046.38	chr9	+	6648	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	28	3	intron_retention	FALSE	canonical	3	111	junction_14	18.0917799013806	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTATGTGTGTTTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	53448374	53485645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.39	chr9	+	5843	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	42	-170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.470633828639	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTGGATTTATATT	NA	False	NA	10	True	AATAAA	-18	NA	53448388	53485472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53462830_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482478_53483870
ES.35046.4	chr9	+	5803	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	-100	359	-100	-359	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTTCAAGATGTAAATTA	NA	False	NA	NA	False	AATAAA	-28	NA	53448246	53485283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.40	chr9	+	4506	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	43	-1387	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	36.7605745840568	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTCCCACACTGTCTT	NA	False	NA	4	True	AATAGA	-14	NA	53448389	53484255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.42	chr9	+	5744	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	8120	-176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	35.2131345345739	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTACCAGTTTGGATT	NA	False	NA	4	True	AATAAA	-12	NA	53456466	53485466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482478_53483870
ES.35046.43	chr9	+	6049	17	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	11276	-168	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	31.4781049898179	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGATTTATATTTA	NA	False	NA	12	True	AATAAA	-20	NA	53459622	53485474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.44	chr9	+	6616	13	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-11936	1010	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	39.6928310067868	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTATTTTGTGATATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	53462897	53486652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481346_53482479_53483870
ES.35046.45	chr9	+	6068	2	ISM	ENSMUSG00000033054.8	ENSMUST00000148336.2	554	3	-1006	-4425	-1006	-2707	intron_retention	FALSE	canonical	3	144	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCTCCTGGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	53473827	53482935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_53474977_53478016
ES.35046.46	chr9	+	4486	6	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	73	1222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.1803827585518	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATATAGCTTAATTGAT	NA	False	NA	7	True	AATAAA	-20	NA	53474906	53486864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53474977_53478016_53478133_53478213_53478325_53481186_53481248_53481346_53482481_53483870
ES.35046.47	chr9	+	2855	4	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	3228	-373	intron_retention	FALSE	canonical	3	111	junction_1	4.02768199119819	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAACAAAAACGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	53478061	53485269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.5	chr9	+	7334	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-54	1224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.6045925229557	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAGCTTAATTGATAC	NA	False	NA	9	True	AATAAA	-22	NA	53448292	53486866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465190_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35046.8	chr9	+	4047	17	NIC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	-38	-418	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	36.955156524496	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTTGTACTGGGCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	53448308	53485224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ES.35047.1	chr9	+	178	1	Intergenic	novelGene_28444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	53535194	53535372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53535200_53535400
ES.35048.1	chr9	+	5700	4	Genic_Genomic	ENSMUSG00000064622.3	novel	129	1	NA	NA	-1284	8615	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53549992	53560020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_53552897_53553526_53554127_53555786_53555929_53557966
ES.35048.2	chr9	+	6330	3	Genic_Genomic	ENSMUSG00000064622.3	novel	129	1	NA	NA	-1284	8615	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53549992	53560020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_53554127_53555786_53555929_53557966
ES.35048.3	chr9	+	4675	1	Antisense	novelGene_ENSMUSG00000032030.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGTAAAAACAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	53555370	53560045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_53555400_53560000
ES.35049.1	chr9	-	4757	32	Fusion	ENSMUSG00000032030.17_ENSMUSG00000032047.6	novel	5945	20	NA	NA	71	805	multi-exon	FALSE	canonical	2	4	junction_12	130.873611493012	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTAAGTCTTCCAAGT	NA	False	NA	NA	False	AATAAA	-27	NA	53581243	53492981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512_53521775_53529167_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53580896_53580957_53581150
ES.35049.10	chr9	-	176	1	Intergenic	novelGene_28440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAACAATATAT	NA	False	NA	NA	False	NA	NA	NA	53512561	53512385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53512400_53512600
ES.35049.11	chr9	-	151	1	Intergenic	novelGene_28441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	53514222	53514071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53514100_53514200
ES.35049.12	chr9	-	1554	1	Intergenic	novelGene_28442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACTGTAGCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	53520535	53518981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53519000_53520500
ES.35049.13	chr9	-	164	1	Intergenic	novelGene_28443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	53520425	53520261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53520300_53520400
ES.35049.14	chr9	-	5933	21	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	73	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_20	148.424147294165	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTATCATGTACCTTT	NA	False	NA	58	True	AGTAAA	-17	NA	53581241	53525880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53580896_53580957_53581150
ES.35049.15	chr9	-	6075	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	-49	-2441	-49	-1	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCAGTATCATGTACCT	NA	False	NA	56	True	AGTAAA	-15	NA	53578860	53525882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.17	chr9	-	5788	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-135	-64	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCAGAAAATCTTGATGT	NA	False	NA	-7	True	AATAAA	-24	NA	53581449	53525945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.18	chr9	-	5788	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	4	-69	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTATCCAGAAAATCTT	NA	False	NA	-12	True	AATAAA	-19	NA	53578803	53525950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.19	chr9	-	6231	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-45	-69	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTATCCAGAAAATCTT	NA	False	NA	-12	True	AATAAA	-19	NA	53578856	53525950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.35049.2	chr9	-	4514	31	Fusion	ENSMUSG00000032030.17_ENSMUSG00000032047.6	novel	3585	19	NA	NA	-36	205	multi-exon	FALSE	canonical	2	4	junction_12	115.819826550648	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGTTGCTAGTTGGG	NA	False	NA	67	True	NA	NA	NA	53578847	53493581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512_53521775_53529167_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.20	chr9	-	5924	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	-10	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.7080179052833	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCTATCCAGAAAATCT	NA	False	NA	-13	True	AATAAA	-18	NA	53578797	53525951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532565_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.21	chr9	-	6049	20	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	-23	-71	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	120.032613296752	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578834	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53578337
ES.35049.23	chr9	-	5898	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	7	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	95.0722272541341	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578780	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553895_53554003_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.24	chr9	-	5625	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	91	-71	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	134.197832217011	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53581223	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53581150
ES.35049.26	chr9	-	5981	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	0	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	95.7080179052833	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578787	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533108_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.27	chr9	-	6095	20	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	76	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	118.916996588218	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578711	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569497_53569870_53569981_53578337
ES.35049.29	chr9	-	6075	20	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-34	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	118.916996588218	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578845	53525952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569343_53569870_53569981_53578337
ES.35049.3	chr9	-	1348	11	NNC	ENSMUSG00000032047.6	novel	3405	12	NA	NA	12	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.5960959816715	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTATTTTTTTGT	NA	False	NA	-26	True	AATAAA	-13	NA	53521618	53493674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53505705_53505807_53505993_53506090_53506578_53506701_53509384_53509433_53521512
ES.35049.32	chr9	-	5775	20	FSM	ENSMUSG00000032030.17	ENSMUST00000120122.8	5945	20	98	72	98	-72	multi-exon	FALSE	canonical	3	18	junction_17	131.010434973792	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATCTATCCAGAAAAT	NA	False	NA	-15	True	AATAAA	-16	NA	53581216	53525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53581150
ES.35049.33	chr9	-	5267	17	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	90	-72	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	116.200241367004	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATCTATCCAGAAAAT	NA	False	NA	-15	True	AATAAA	-16	NA	53581224	53525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.36	chr9	-	5632	20	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	71	-74	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_19	117.024324483313	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCATCTATCCAGAAA	NA	False	NA	-17	True	AATAAA	-14	NA	53581243	53525955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53580896_53580957_53581150
ES.35049.4	chr9	-	4547	32	Fusion	ENSMUSG00000032030.17_ENSMUSG00000032047.6	novel	5945	20	NA	NA	42	112	multi-exon	FALSE	canonical	2	4	junction_12	130.825514700176	625	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTATTTTTTTGT	NA	False	NA	-26	True	AATAAA	-13	NA	53578745	53493674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512_53521775_53529167_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.35049.42	chr9	-	5607	17	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	3097	-77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.834331950978	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53566884	53525958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535139_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571
ES.35049.43	chr9	-	5908	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	11	-77	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_18	94.340334774857	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53578776	53525958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569974_53578337
ES.35049.46	chr9	-	5515	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	-14	-77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.6067207979041	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53578386	53525958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533267_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.47	chr9	-	5892	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	11	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	123.813878637291	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53578776	53525958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546343_53553817_53553895_53553976_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.49	chr9	-	5827	18	NNC	ENSMUSG00000032030.17	novel	5942	18	NA	NA	11	-77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	126.501856599749	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATTTCATCTATCCAG	NA	False	NA	-20	True	AATAAA	-11	NA	53578776	53525958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569974_53578337
ES.35049.50	chr9	-	5138	19	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	98	-477	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	114.002544914197	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGCTCCAAGGGCAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	53581216	53526358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553895_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.51	chr9	-	5062	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	8	-537	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	91.0114800790144	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGTTAATCATTCTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	53578364	53526418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558163_53566571_53566672_53569870_53569981_53578337
ES.35049.52	chr9	-	5258	8	ISM	ENSMUSG00000032030.17	ENSMUST00000166367.8	5942	18	36804	537	-8669	-537	3prime_fragment	FALSE	canonical	3	345	junction_2	25.387607454128	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGTTAATCATTCTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	53542003	53526418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474
ES.35049.53	chr9	-	4943	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	1	-1359	1	935	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGGTGTTTATCAAAA	NA	False	NA	NA	False	AATATA	-19	NA	53578810	53526964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.54	chr9	-	4463	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	69	833	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTATGTCCTAATTGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	53581245	53527066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.55	chr9	-	4390	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	445	-1250	6	826	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTTAATTATGTCCT	NA	False	NA	NA	False	ATTAAA	-15	NA	53578366	53527073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.56	chr9	-	4436	20	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	13	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	93.1608979593223	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGACTCAGGACTTTA	NA	False	NA	NA	False	TTTAAA	-45	NA	53581301	53527861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337_53579050_53581150
ES.35049.57	chr9	-	4990	18	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	103	0	intron_retention	FALSE	canonical	3	65	junction_17	84.5682705720251	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCAACACCTACCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	53581211	53527899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.58	chr9	-	3801	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGGCAACACCTACCT	NA	False	NA	NA	False	AATAAA	-15	NA	53578377	53527901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.35049.59	chr9	-	3724	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	24	-163	0	163	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTGCTTTCTTAACC	NA	False	NA	NA	False	AAAACA	-30	NA	53578787	53528160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.60	chr9	-	3695	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	9	150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	95.0722272541341	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTGCAGTGAGAGAAT	NA	False	NA	NA	False	AAAACA	-17	NA	53578798	53528173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553895_53554003_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.61	chr9	-	3305	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	67	97	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTATTATACTGTACC	NA	False	NA	NA	False	AATACA	-19	NA	53581247	53528226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.62	chr9	-	3724	20	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	9	82	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	120.032613296752	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTCATACGTCTAATAT	NA	False	NA	NA	False	AATACA	-4	NA	53578798	53528241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53578337
ES.35049.63	chr9	-	3920	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	-27	80	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCTCATACGTCTAAT	NA	False	NA	NA	False	AATACA	-2	NA	53578838	53528243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.35049.64	chr9	-	3639	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	-46	-8	-46	8	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGTATACGTACATTAT	NA	False	NA	65	True	AATGAA	-22	NA	53578857	53528315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.65	chr9	-	4950	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	11	6	intron_retention	FALSE	canonical	3	311	junction_16	45.8296831932286	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGGTATACGTACATT	NA	False	NA	63	True	AATGAA	-20	NA	53578776	53528317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.66	chr9	-	3027	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	86	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	118.554266843717	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGTGGGTATACG	NA	False	NA	57	True	AATGAA	-14	NA	53581228	53528323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.67	chr9	-	3203	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	57	-15	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTGCTTCAGTTAAAAA	NA	False	NA	42	True	AAAACA	-15	NA	53581257	53528338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.69	chr9	-	3146	20	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	8	-62	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	120.032613296752	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTACGGCTGGAGAGCT	NA	False	NA	-5	True	GATAAA	-23	NA	53578364	53528385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53578337
ES.35049.7	chr9	-	5738	1	NIC	ENSMUSG00000032047.6	novel	3405	12	NA	NA	-9917	-5450	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAGCTGAATGGTTTT	NA	False	NA	NA	False	NA	NA	NA	53504974	53499236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53499200_53505000
ES.35049.70	chr9	-	3131	19	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	98	-65	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	111.09667961835	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGTACGGCTGGAGA	NA	False	NA	-8	True	GATAAA	-20	NA	53581216	53528388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558163_53566571_53566672_53569870_53569981_53581150
ES.35049.71	chr9	-	3360	18	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	32	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	121.720964010251	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGTACGGCTGGAGA	NA	False	NA	-8	True	GATAAA	-20	NA	53578755	53528388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553895_53553980_53554127_53555786_53555929_53557966_53558144_53569870_53569981_53578337
ES.35049.72	chr9	-	3338	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	-4	-65	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGTACGGCTGGAGA	NA	False	NA	-8	True	GATAAA	-20	NA	53578791	53528388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.73	chr9	-	3412	21	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	86	-65	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_20	148.424147294165	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGTACGGCTGGAGA	NA	False	NA	-8	True	GATAAA	-20	NA	53581228	53528388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53580896_53580957_53581150
ES.35049.74	chr9	-	3734	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	9	-66	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTGTACGGCTGGAG	NA	False	NA	-9	True	GATAAA	-19	NA	53578798	53528389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.35049.75	chr9	-	3509	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	-46	122	-46	-122	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTTCTGTTTAGTTAT	NA	False	NA	-14	True	ATTAAA	-37	NA	53578857	53528445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.76	chr9	-	3133	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	17	-125	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAGAGTTCTGTTTAGT	NA	False	NA	-17	True	ATTAAA	-34	NA	53581297	53528448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
ES.35049.79	chr9	-	3275	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	0	-129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	93.8585035312257	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCAGGAGAGTTCTGTT	NA	False	NA	-21	True	ATTAAA	-30	NA	53578807	53528452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53566571_53566672_53569870_53569981_53578337
ES.35049.8	chr9	-	159	1	Intergenic	novelGene_28438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53501768	53501609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53501600_53501800
ES.35049.81	chr9	-	3286	20	FSM	ENSMUSG00000032030.17	ENSMUST00000120122.8	5945	20	73	2586	73	-144	multi-exon	FALSE	canonical	3	18	junction_17	131.010434973792	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTGATTTTCAATGAG	NA	False	NA	-36	True	ATTAAA	-15	NA	53581241	53528467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53581150
ES.35049.82	chr9	-	3083	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	23	-293	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAATCGTCAACACTGT	NA	False	NA	NA	False	ATTAAA	-35	NA	53578764	53528616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.83	chr9	-	3186	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	-26	425	-26	-425	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCAGATATTCATGCAC	NA	False	NA	NA	False	AATATA	-16	NA	53578837	53528748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.84	chr9	-	2896	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	22	667	-2	-667	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTATTTTGCCAGTCA	NA	False	NA	-4	True	ATTAAA	-21	NA	53578789	53528990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.85	chr9	-	2721	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	11	-667	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTATTTTGCCAGTCA	NA	False	NA	-4	True	ATTAAA	-21	NA	53578776	53528990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.86	chr9	-	2921	20	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	43	-667	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	120.032613296752	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTATTTTGCCAGTCA	NA	False	NA	-4	True	ATTAAA	-21	NA	53578744	53528990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53566953_53567024_53569870_53569981_53578337
ES.35049.87	chr9	-	4908	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	24	-667	intron_retention	FALSE	canonical	3	311	junction_16	45.7615302088864	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTATTTTGCCAGTCA	NA	False	NA	-4	True	ATTAAA	-21	NA	53578763	53528990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.88	chr9	-	5010	17	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	0	-671	intron_retention	FALSE	canonical	3	311	junction_15	46.7278941720039	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGACTCTATTTTGCCA	NA	False	NA	-8	True	ATTAAA	-17	NA	53578787	53528994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53554127_53555786_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.89	chr9	-	2789	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	31	-673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	95.7136934357415	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACGACTCTATTTTGC	NA	False	NA	-10	True	ATTAAA	-15	NA	53578756	53528996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534234_53534992_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ES.35049.9	chr9	-	136	1	Intergenic	novelGene_28439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53509779	53509643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53509600_53509800
ES.35049.90	chr9	-	2846	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	61	-673	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	91.0114800790144	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACGACTCTATTTTGC	NA	False	NA	-10	True	ATTAAA	-15	NA	53578726	53528996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558163_53566571_53566672_53569870_53569981_53578337
ES.35049.91	chr9	-	3064	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	50	-675	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAAACGACTCTATTTT	NA	False	NA	-12	True	ATTAAA	-13	NA	53578737	53528998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
ES.3505.1	chr10	+	1970	9	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-131	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	84.4951921709159	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	15	True	AGTAAA	-18	NA	85857704	85884192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882679_85883593
ES.3505.10	chr10	+	1899	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-76	3565	-76	-15	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAAATTGTATGGC	NA	False	NA	-5	True	NA	NA	NA	85857759	85884172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.11	chr10	+	2106	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-66	11	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	100.668628874671	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTAAGGATGTAT	NA	False	NA	21	True	AGTAAA	-24	NA	85857769	85884198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85868823_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.12	chr10	+	4069	8	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-62	5	intron_retention	FALSE	canonical	3	208	junction_3	26.2048445435385	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	15	True	AGTAAA	-18	NA	85857773	85884192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.13	chr10	+	1228	6	NIC	ENSMUSG00000001786.15	novel	1498	8	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	101.661005306853	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857780	85884187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.14	chr10	+	6041	8	NIC	ENSMUSG00000001786.15	novel	1498	8	NA	NA	-53	4	intron_retention	FALSE	canonical	3	23	junction_1	78.8731867736859	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTGACTTTTTTTAAG	NA	False	NA	14	True	AGTAAA	-17	NA	85857782	85884191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.15	chr10	+	9896	6	NIC	ENSMUSG00000001786.15	novel	1498	8	NA	NA	-52	5	intron_retention	FALSE	canonical	3	23	junction_1	92.5863920886865	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	15	True	AGTAAA	-18	NA	85857783	85884192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.16	chr10	+	5432	10	NNC	ENSMUSG00000001786.15	novel	1655	9	NA	NA	-52	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	100.857557543202	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCCCTACCCTGTTCC	NA	False	NA	7	True	AATAAA	-24	NA	85857783	85887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585_85887173_85887218
ES.3505.17	chr10	+	5439	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-48	-3	-48	3	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGCCCTACCCTGTTC	NA	False	NA	6	True	AATAAA	-23	NA	85857787	85887740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.18	chr10	+	5390	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-45	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	80.0888395609664	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGCCCTACCCTGTTC	NA	False	NA	6	True	AATAAA	-23	NA	85857790	85887740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585_85887173_85887218
ES.3505.19	chr10	+	3816	9	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-45	4	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	102.672948603807	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTGACTTTTTTTAAG	NA	False	NA	14	True	AGTAAA	-17	NA	85857790	85884191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.2	chr10	+	2043	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-114	3459	-114	91	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTGAAGGGTGGTTG	NA	False	NA	101	True	NA	NA	NA	85857721	85884278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.20	chr10	+	6194	8	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-45	13	intron_retention	FALSE	canonical	3	208	junction_2	21.2295519865828	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAAGGATGTATTT	NA	False	NA	23	True	AGTAAA	-26	NA	85857790	85884200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.21	chr10	+	1916	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	-261	0	-44	0	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857791	85884187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.22	chr10	+	3902	8	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-42	10	intron_retention	FALSE	canonical	3	23	junction_1	82.7827252018	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTTAAGGATGTA	NA	False	NA	20	True	AGTAAA	-23	NA	85857793	85884197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.23	chr10	+	1923	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-41	5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	112.979622329553	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	15	True	AGTAAA	-18	NA	85857794	85884192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85866934_85868823_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.24	chr10	+	10032	6	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-40	1	intron_retention	FALSE	canonical	3	221	junction_1	19.9699774661866	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857795	85884188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.25	chr10	+	11370	8	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-37	2	intron_retention	FALSE	canonical	0	0	junction_7	86.8312931458916	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGGCCCTACCCTGTT	NA	False	NA	5	True	AATAAA	-22	NA	85857798	85887739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585_85887173_85887218
ES.3505.26	chr10	+	7710	7	NIC	ENSMUSG00000001786.15	novel	1498	8	NA	NA	-34	1	intron_retention	FALSE	canonical	3	23	junction_1	85.188842514081	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGACTTGACTTTTTTT	NA	False	NA	11	True	AGTAAA	-14	NA	85857801	85884188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.27	chr10	+	1835	9	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.8848484713261	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857831	85884187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866798_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.28	chr10	+	5201	9	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	77.6434156899347	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAATGGCCCTACCCTGT	NA	False	NA	4	True	AATAAA	-21	NA	85857871	85887738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.29	chr10	+	8165	7	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-74	-1	intron_retention	FALSE	canonical	3	208	junction_2	15.2388392675499	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCAGACTTGACTTTTT	NA	False	NA	9	True	AGTAAA	-12	NA	85857978	85884186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85882675_85883585
ES.3505.3	chr10	+	7992	8	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-84	0	intron_retention	FALSE	canonical	1	2	junction_2	108.650722923673	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857751	85884187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85866934_85868933_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.30	chr10	+	5196	8	NIC	ENSMUSG00000001786.15	novel	1799	9	NA	NA	-68	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	104.984352575583	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACAATGGCCCTACCCT	NA	False	NA	2	True	AATAAA	-19	NA	85857984	85887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858195_85860279_85860575_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.31	chr10	+	1874	9	FSM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	-75	0	-67	0	multi-exon	FALSE	canonical	3	31	junction_1	75.1232320923428	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857985	85884187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.32	chr10	+	5348	10	NNC	ENSMUSG00000001786.15	novel	1799	9	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	98.9782367898352	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTACAATGGCCCTACCC	NA	False	NA	1	True	AATAAA	-18	NA	85858013	85887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585_85887173_85887218
ES.3505.33	chr10	+	6513	6	NIC	ENSMUSG00000001786.15	novel	1655	9	NA	NA	3839	6	intron_retention	FALSE	canonical	3	208	junction_1	23.465719677862	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	NA	False	NA	16	True	AGTAAA	-19	NA	85861899	85884193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85865101_85866791_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.34	chr10	+	6068	7	NNC	ENSMUSG00000001786.15	novel	4728	6	NA	NA	3999	3	intron_retention	FALSE	canonical	2	6	junction_1	114.790751659995	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	NA	False	NA	13	True	AGTAAA	-16	NA	85862059	85884190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85866934_85868823_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.35	chr10	+	3737	8	NNC	ENSMUSG00000001786.15	novel	1655	9	NA	NA	4814	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.540788711185	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	NA	False	NA	13	True	AGTAAA	-16	NA	85862874	85884190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85865386_85866791_85866934_85868933_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.36	chr10	+	4256	7	NIC	ENSMUSG00000001786.15	novel	1655	9	NA	NA	-4764	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	88.1351550492512	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	NA	False	NA	13	True	AGTAAA	-16	NA	85864070	85884190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85865101_85866791_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.37	chr10	+	5355	5	NNC	ENSMUSG00000001786.15	novel	780	3	NA	NA	-4042	73	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.482220817336	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCAGGATGCTTCT	2362	False	NA	83	True	AAAACA	-29	NA	85874273	85884260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85875950_85876092_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.38	chr10	+	4979	5	NNC	ENSMUSG00000001786.15	novel	780	3	NA	NA	-3736	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.482220817336	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	2668	False	NA	13	True	AGTAAA	-16	NA	85874579	85884190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85875942_85876084_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.39	chr10	+	3976	3	NIC	ENSMUSG00000001786.15	novel	4728	6	NA	NA	-1181	7	intron_retention	FALSE	canonical	3	240	junction_2	18.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGACTTTTTTTAAGGAT	5223	False	NA	17	True	AGTAAA	-20	NA	85877134	85884194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85880464_85882636_85882675_85883585
ES.3505.4	chr10	+	1854	10	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-84	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	113.632937322083	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGACTTTTTTTAA	NA	False	NA	13	True	AGTAAA	-16	NA	85857751	85884190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85866934_85868933_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.40	chr10	+	3584	2	NIC	ENSMUSG00000001786.15	novel	4728	6	NA	NA	1383	6	intron_retention	FALSE	canonical	3	240	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTTTTTTTAAGGA	7787	False	NA	16	True	AGTAAA	-19	NA	85879698	85884193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85882675_85883585
ES.3505.5	chr10	+	1547	8	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-84	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	106.652209904676	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGACTTTTTTTAAGG	NA	False	NA	15	True	AGTAAA	-18	NA	85857751	85884192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860431_85860575_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.6	chr10	+	4015	9	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-83	13	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	80.5922414069742	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAAGGATGTATTT	NA	False	NA	23	True	AGTAAA	-26	NA	85857752	85884200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.7	chr10	+	1748	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-83	3723	-83	-143	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGATCTCTGCTGTCGG	NA	False	NA	NA	False	NA	NA	NA	85857752	85884014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.3505.8	chr10	+	1937	9	NNC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-79	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.4951921709159	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTTAAGGATGTA	NA	False	NA	20	True	AGTAAA	-23	NA	85857756	85884197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883575
ES.3505.9	chr10	+	9989	7	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-77	4	intron_retention	FALSE	canonical	3	13	junction_2	88.3622594148027	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTGACTTTTTTTAAG	NA	False	NA	14	True	AGTAAA	-17	NA	85857758	85884191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_85858009_85860279_85869015_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ES.35050.1	chr9	+	185	1	Intergenic	novelGene_28445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAGAGAAACATA	NA	False	NA	NA	False	NA	NA	NA	53587664	53587849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53587700_53587800
ES.35051.1	chr9	+	174	1	Intergenic	novelGene_28446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGAGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	53608067	53608241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53608100_53608200
ES.35052.1	chr9	+	176	1	Intergenic	novelGene_28447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGATAGAAAT	NA	False	NA	NA	False	NA	NA	NA	53608244	53608420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53608200_53608400
ES.35053.1	chr9	-	3000	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	-1	-28	-1	28	multi-exon	FALSE	canonical	3	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTTGAATATTTATA	NA	False	NA	NA	False	CATAAA	-13	NA	53617533	53595381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53598037_53617188
ES.35053.2	chr9	-	2850	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	12	109	12	-109	multi-exon	FALSE	canonical	3	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATCTGGAAATATTTT	NA	False	NA	NA	False	CATAAA	-43	NA	53617520	53595518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53598037_53617188
ES.35053.3	chr9	-	1994	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	15	962	15	-962	multi-exon	FALSE	canonical	3	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACAATATTATTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	53617517	53596371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53598037_53617188
ES.35053.4	chr9	-	173	1	FSM	ENSMUSG00000082465.2	ENSMUST00000118010.2	750	1	610	-33	610	33	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTAAAAAAAAAAACAA	9375	False	NA	NA	False	AATAAA	-12	NA	53600973	53600800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_53600800_53601000
ES.35053.5	chr9	-	1832	1	Intergenic	novelGene_28448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGGTGTGTGACAATTT	6694	False	NA	NA	False	NA	NA	NA	53610665	53608833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53608800_53610700
ES.35053.6	chr9	-	197	1	Intergenic	novelGene_28449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATCACATGATCAAT	1147	False	NA	NA	False	NA	NA	NA	53616212	53616015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53616000_53616200
ES.35054.1	chr9	-	178	1	Intergenic	novelGene_28450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	53619797	53619619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53619600_53619800
ES.35055.1	chr9	+	127	1	Intergenic	novelGene_28451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53657952	53658079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_53658000_53658100
ES.35056.1	chr9	+	2639	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	-66	-15	-66	15	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTTTGTTTGTTTGTT	NA	False	NA	54	True	ATTAAA	-30	NA	53678755	53725453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ES.35056.2	chr9	+	2426	9	NNC	ENSMUSG00000042195.10	novel	2558	8	NA	NA	213	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	73.3207849112378	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAATCACAATGTGTT	NA	False	NA	42	True	ATTAAA	-18	NA	53679034	53725441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53679179_53705121_53705298_53708294_53708423_53709834_53709913_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ES.35056.3	chr9	+	2350	8	NNC	ENSMUSG00000042195.10	novel	2558	8	NA	NA	214	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.0296176788778	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAGTAGAATCACAATG	NA	False	NA	38	True	AATAAA	-45	NA	53679035	53725437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53679179_53705114_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ES.35056.4	chr9	+	3619	7	NIC	ENSMUSG00000042195.10	novel	2558	8	NA	NA	216	9	intron_retention	FALSE	canonical	3	165	junction_1	9.60324019392529	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAATGTGTTTGTTTG	NA	False	NA	48	True	ATTAAA	-24	NA	53679037	53725447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53715487_53716969_53717023_53718158_53718314_53724066
ES.35056.5	chr9	+	2335	8	NNC	ENSMUSG00000042195.10	novel	1685	2	NA	NA	-16064	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	61.3361430885542	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATCACAATGTGTTTGT	NA	False	NA	45	True	ATTAAA	-21	NA	53701936	53725444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53702065_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ES.35056.6	chr9	+	2294	8	NNC	ENSMUSG00000042195.10	novel	1685	2	NA	NA	-13286	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.0296176788778	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTTCGTATTATTAAA	NA	False	NA	5	True	AATAAA	-12	NA	53704714	53725404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_53704842_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ES.35057.1	chr9	-	3426	1	Antisense	novelGene_ENSMUSG00000042195.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGTGGGGCATGGCA	NA	False	NA	NA	False	NA	NA	NA	53710734	53707308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_53707300_53710700
ES.35057.2	chr9	-	172	1	Intergenic	novelGene_28452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAGCAAAGT	NA	False	NA	NA	False	NA	NA	NA	53709314	53709142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53709100_53709300
ES.35058.1	chr9	-	156	1	Intergenic	novelGene_28453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	53737661	53737505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53737500_53737700
ES.35059.1	chr9	-	926	3	Antisense	novelGene_ENSMUSG00000042045.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	15	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGATAATTTCCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	53788489	53754544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_53755253_53777088_53777180_53788362
ES.35059.2	chr9	-	1328	2	Intergenic	novelGene_28454	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCTAAGCTCTGA	NA	False	NA	NA	False	NA	NA	NA	53788469	53775958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53777180_53788362
ES.35059.3	chr9	-	715	3	Intergenic	novelGene_28455	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	11.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCTAAGCTCTGA	NA	False	NA	NA	False	NA	NA	NA	53788518	53775958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_53776427_53777088_53777180_53788362
ES.3506.1	chr10	-	7233	3	ISM	ENSMUSG00000059602.15	ENSMUST00000120638.8	2360	14	434865	-6371	2852	6371	3prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAGTCCGAAAATCA	NA	False	NA	NA	False	AATAAA	-19	NA	85899855	85884617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_85891529_85893234_85893527_85899825
ES.35060.1	chr9	-	4282	2	NNC	ENSMUSG00000074345.5	novel	4403	2	NA	NA	-21031	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAACAAAACTAAAA	NA	False	NA	NA	False	NA	NA	NA	53996703	53930711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_53934922_53996631
ES.35061.1	chr9	+	179	1	Intergenic	novelGene_28456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCGTCATCAAGACCTTA	NA	False	NA	NA	False	NA	NA	NA	54092969	54093148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54093000_54093100
ES.35062.1	chr9	-	2434	9	NIC	ENSMUSG00000032274.10	novel	2373	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTTTGCATTGT	NA	False	NA	NA	False	NA	NA	NA	54109502	54073220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54074290_54075790_54076033_54079086_54079250_54079959_54080075_54080612_54080728_54083759_54083937_54087465_54087621_54100540_54100701_54109264
ES.35062.2	chr9	-	4944	2	Intergenic	novelGene_28457	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	54100026	54094937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54096576_54096720
ES.35063.1	chr9	+	3786	21	Antisense	novelGene_ENSMUSG00000041268.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGTAAGGCCTGGCAG	NA	False	NA	NA	False	NA	NA	NA	54282806	54322799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_54282851_54283506_54283648_54285999_54286114_54286194_54286286_54287056_54287122_54288191_54288310_54289136_54289346_54289922_54290008_54290942_54291072_54294696_54294876_54300911_54301163_54303526_54303652_54305330_54305406_54307223_54307420_54308202_54309271_54311240_54311502_54313027_54313196_54313878_54313977_54316432_54316604_54318882_54318997_54322715
ES.35064.1	chr9	+	653	1	Antisense	novelGene_ENSMUSG00000041268.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTTATCCTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	54353835	54354488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_54353800_54354500
ES.35064.2	chr9	+	1945	2	Antisense	novelGene_ENSMUSG00000041268.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTTCTTTCAATAAAC	NA	False	NA	NA	False	NA	NA	NA	54353835	54356796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_54354348_54355363
ES.35065.1	chr9	+	178	1	Intergenic	novelGene_28458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	54373447	54373625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54373400_54373600
ES.35066.1	chr9	-	10847	44	FSM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	-224	-9	-224	9	multi-exon	TRUE	canonical	3	8	junction_28	15.8606697115632	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTATTCGTTCACCAAT	6708	False	NA	9	True	AATAAA	-36	NA	54409134	54272432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.10	chr9	-	3525	18	NNC	ENSMUSG00000041268.18	novel	10614	44	NA	NA	-12278	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	6.50578661774047	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTTTAATCCCCTAA	NA	False	NA	-12	True	AATAAA	-15	NA	54301455	54272453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54301394
ES.35066.11	chr9	-	12177	43	NIC	ENSMUSG00000041268.18	novel	10614	44	NA	NA	-140	-6	intron_retention	FALSE	canonical	3	4	junction_17	16.3768855693743	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACTTTAATCCCCTAA	6792	False	NA	-12	True	AATAAA	-15	NA	54409050	54272453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54273912_54274837_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.14	chr9	-	10731	44	FSM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	-232	115	-232	-13	multi-exon	FALSE	canonical	3	8	junction_28	15.8606697115632	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTAGAGTTTTATTTT	6700	False	NA	-115	True	AATACA	-18	NA	54409142	54272556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.16	chr9	-	2612	2	ISM	ENSMUSG00000041268.18	ENSMUST00000154092.2	4039	11	13079	113	13079	-17	3prime_fragment	FALSE	canonical	3	27	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTGTTAGAGTTTTA	NA	False	NA	-119	True	AATACA	-14	NA	54276098	54272560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54273912_54274837
ES.35066.17	chr9	-	8962	35	NNC	ENSMUSG00000041268.18	novel	10614	44	NA	NA	-4625	-25	intron_retention	FALSE	canonical	0	0	junction_34	8.01145373845847	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATGTTATTTGTTA	NA	False	NA	NA	False	AATACA	-6	NA	54358910	54272568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358337_54358885
ES.35066.18	chr9	-	9668	42	ISM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	-31	3341	-31	-2388	5prime_fragment	FALSE	canonical	3	8	junction_26	16.2369061326797	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGAAATTAGCATGTGTG	6901	False	NA	NA	False	NA	NA	NA	54408941	54275782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.19	chr9	-	3226	16	FSM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-262	-6	-207	6	multi-exon	FALSE	canonical	3	8	junction_1	17.8940089291236	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTAGATTGGTTGATTC	6725	False	NA	NA	False	AATAAA	-18	NA	54409117	54330450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.20	chr9	-	3765	12	NNC	ENSMUSG00000041268.18	novel	2958	16	NA	NA	-238	2	intron_retention	FALSE	canonical	0	0	junction_2	15.2244909263641	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTGGTTGGTAGTTGGT	6694	False	NA	NA	False	AATAAA	-20	NA	54409148	54352612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54354350_54358080_54358337_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.22	chr9	-	2835	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-216	22158	-161	0	5prime_fragment	FALSE	canonical	3	29	junction_1	10.0950345329881	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6771	False	NA	NA	False	AATAAA	-18	NA	54409071	54352614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.23	chr9	-	3103	11	NIC	ENSMUSG00000041268.18	novel	2958	16	NA	NA	-71	0	intron_retention	FALSE	canonical	0	0	junction_3	15.587174214719	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6861	False	NA	NA	False	AATAAA	-18	NA	54408981	54352614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54352789_54353655_54354350_54358080_54359126_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.24	chr9	-	2873	14	NNC	ENSMUSG00000041268.18	novel	2958	16	NA	NA	-42	0	intron_retention	TRUE	non_canonical	0	0	junction_3	22.5679775227524	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6890	False	NA	NA	False	AATAAA	-18	NA	54408952	54352614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54352789_54353655_54354350_54355365_54355522_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368221_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.25	chr9	-	3613	12	NIC	ENSMUSG00000041268.18	novel	2958	16	NA	NA	-73	-1	intron_retention	FALSE	canonical	3	36	junction_9	8.35671650493192	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACCGTGGTTGGTAGTT	6859	False	NA	NA	False	AATAAA	-17	NA	54408983	54352615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.26	chr9	-	2551	12	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-287	23380	-232	-1222	5prime_fragment	FALSE	canonical	3	36	junction_9	8.35671650493192	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGTACATTTCATGACCC	6700	False	NA	NA	False	AAAACA	-41	NA	54409142	54353836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35066.6	chr9	-	10457	43	NIC	ENSMUSG00000041268.18	novel	10614	44	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_42	16.0212443995104	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATCCCCTAAACTGT	6953	False	NA	-7	True	AATAAA	-20	NA	54408889	54272448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54408634
ES.35066.7	chr9	-	11955	42	NIC	ENSMUSG00000041268.18	novel	10614	44	NA	NA	25	-3	intron_retention	FALSE	canonical	0	0	junction_9	16.6645170138584	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTAATCCCCTAAACT	6957	False	NA	-9	True	AATAAA	-18	NA	54408885	54272450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54273912_54274837_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ES.35067.1	chr9	+	177	1	Intergenic	novelGene_28459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54419481	54419658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54419500_54419700
ES.35068.1	chr9	+	175	1	Intergenic	novelGene_28460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGCGAACAGGGC	NA	False	NA	NA	False	NA	NA	NA	54423715	54423890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54423700_54423900
ES.35069.1	chr9	-	883	6	FSM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	21	529	21	-529	multi-exon	FALSE	canonical	1	2	junction_1	2.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAATAAAATA	6937	False	NA	NA	False	NA	NA	NA	54467481	54452606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54461770_54461806_54467251
ES.3507.1	chr10	+	4611	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	110	1	-72	-1	multi-exon	FALSE	canonical	2	3	junction_1	4.15331193145904	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGCTGTCTCTTGCCT	NA	False	NA	18	True	AGTAAA	-20	NA	86136345	86185369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
ES.3507.2	chr10	+	4249	4	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	37870	1	35388	-1	3prime_fragment	FALSE	canonical	3	9	junction_3	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGCTGTCTCTTGCCT	NA	False	NA	18	True	AGTAAA	-20	NA	86174105	86185369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_86174320_86179796_86179909_86180417_86180540_86181568
ES.3507.3	chr10	+	2045	4	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	37991	2084	35509	-2084	3prime_fragment	FALSE	canonical	3	9	junction_3	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGATTATTTTAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	86174226	86183286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_86174320_86179796_86179909_86180417_86180540_86181568
ES.35070.1	chr9	-	177	1	Intergenic	novelGene_28461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTGA	9976	False	NA	NA	False	NA	NA	NA	54491862	54491685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54491700_54491900
ES.35071.1	chr9	+	2490	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-85	-2	-55	2	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCGTTTGCATTCTCTG	NA	False	NA	37	True	AATAAA	-17	NA	54493709	54511947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.10	chr9	+	2485	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	729.906650886443	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGACTGAGGCGTTT	NA	False	NA	27	True	AATAAA	-7	NA	54493761	54511937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497205_54499482_54499540_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.11	chr9	+	1453	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	-1	-327	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	731.625474345135	675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAACTGTATCATTTA	NA	False	NA	NA	False	NA	NA	NA	54493763	54510893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497181_54499444_54499540_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.12	chr9	+	2384	12	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	552.059824282457	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493765	54511945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565_54510964_54511011
ES.35071.14	chr9	+	4825	9	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1656	junction_1	105.271969203582	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493765	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.16	chr9	+	2346	10	NIC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	1656	junction_1	101.161037734671	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493771	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.17	chr9	+	1686	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	577.924052103735	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493771	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504133_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.19	chr9	+	8213	9	NIC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	1827	junction_3	64.4930955606877	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493771	54511945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.2	chr9	+	1821	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-80	662	-50	54	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTCTGTGTATTTGAT	NA	False	NA	109	True	NA	NA	NA	54493714	54511283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.20	chr9	+	4054	11	NNC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	7	2	intron_retention	FALSE	canonical	3	33	junction_2	563.994290751245	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGATGTAATTTTGT	NA	False	NA	57	True	AATAAA	-24	NA	54493771	54511231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54499547_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.21	chr9	+	1554	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	-23	872	7	-147	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAAGATAACATTATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	54493771	54511073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.23	chr9	+	4896	10	NIC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	1656	junction_1	101.379497281925	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493774	54511945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.24	chr9	+	2461	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	574.433599295863	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493774	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54494591_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.25	chr9	+	2360	10	NIC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_1	600.552050560231	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493774	54511945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.26	chr9	+	2399	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	555.128237437081	679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493774	54511945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497181_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.28	chr9	+	4271	9	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	1656	junction_1	107.52761273273	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493777	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.29	chr9	+	6856	9	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	1656	junction_1	106.790390485287	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493777	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.30	chr9	+	4688	10	NNC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	13	-3	intron_retention	FALSE	canonical	3	33	junction_2	592.830394415814	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAATGAATGATGTAAT	NA	False	NA	52	True	AATAAA	-19	NA	54493777	54511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54499547_54499677_54499762_54502449_54502565_54503285_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.31	chr9	+	7480	9	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	-11	3	intron_retention	FALSE	canonical	3	1827	junction_3	64.4930955606877	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATAATGAATGATGT	NA	False	NA	49	True	AATAAA	-16	NA	54493782	54511223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.33	chr9	+	4859	9	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	12	-1	intron_retention	FALSE	canonical	3	1656	junction_1	107.491860156944	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAATCCATAATGAATG	NA	False	NA	45	True	AATAAA	-12	NA	54493806	54511219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.34	chr9	+	6494	7	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	2343	-3	intron_retention	FALSE	canonical	3	1847	junction_6	62.2961118815256	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATAATGAATGATGTAAT	NA	False	NA	52	True	AATAAA	-19	NA	54496137	54511226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54499762_54502449_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.35	chr9	+	4742	10	NNC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	2592	0	intron_retention	FALSE	canonical	3	33	junction_1	594.299296921162	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54496386	54511220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54499547_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.4	chr9	+	1715	11	NNC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	-28	3	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	555.128237437081	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATAATGAATGATGT	NA	False	NA	49	True	AATAAA	-16	NA	54493736	54511223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497181_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.5	chr9	+	5570	9	NIC	ENSMUSG00000032279.12	novel	2580	11	NA	NA	-18	1	intron_retention	FALSE	canonical	3	1656	junction_1	105.271969203582	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGTTTGCATTCTCT	NA	False	NA	36	True	AATAAA	-16	NA	54493746	54511946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.6	chr9	+	1831	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	721.870859080821	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATAATGAATGATGT	NA	False	NA	49	True	AATAAA	-16	NA	54493746	54511223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497205_54499444_54499547_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.7	chr9	+	4206	10	NIC	ENSMUSG00000032279.12	novel	2403	11	NA	NA	-15	1	intron_retention	FALSE	canonical	3	1656	junction_1	101.379497281925	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATGATGTAATTTTG	NA	False	NA	56	True	AATAAA	-23	NA	54493749	54511230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54493828_54497141_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35071.8	chr9	+	1790	12	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	724.176876709227	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATGATGTAATTTTGT	NA	False	NA	57	True	AATAAA	-24	NA	54493757	54511231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54493828_54497141_54497205_54499482_54499547_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ES.35072.3	chr9	-	2670	14	FSM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	200	10	25	-10	multi-exon	FALSE	canonical	0	0	junction_5	2.25320284859643	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAAGTACCGGATGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	54568954	54512170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54512761_54516299_54516547_54516978_54517119_54522019_54522238_54523150_54523382_54525305_54525488_54529149_54529327_54529720_54529871_54529959_54530041_54534714_54534836_54535153_54535243_54535689_54535911_54549879_54549981_54568832
ES.35073.1	chr9	+	2105	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	-9	907	-9	647	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTGTTCTTTGTGCTC	NA	False	NA	NA	False	AATAAA	-20	NA	54606833	54622692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ES.35073.2	chr9	+	3005	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	-3	1	-3	-1	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATGGCTTTGCTTTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	54606839	54623598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ES.35074.1	chr9	-	157	1	Intergenic	novelGene_28462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	54617088	54616931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54616900_54617100
ES.35075.1	chr9	-	3639	12	NNC	ENSMUSG00000061559.16	novel	784	8	NA	NA	1	3896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	433.020317123022	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATGATGTCATTATT	5459	False	NA	NA	False	ATTAAA	-22	NA	54641765	54618122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54620562_54621685_54621906_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.10	chr9	-	5548	9	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	544	junction_8	194.479915415448	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5464	False	NA	-3	True	AATAAA	-19	NA	54641760	54624442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.11	chr9	-	981	9	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	38	junction_6	371.278113413651	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATTTGTGAACGTGC	5455	False	NA	-4	True	AATAAA	-18	NA	54641769	54624443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54637917_54637946_54638670_54638722_54641652
ES.35075.12	chr9	-	1185	11	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	354.163013314491	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATTTGTGAACGTGC	5439	False	NA	-4	True	AATAAA	-18	NA	54641785	54624443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635575_54637917_54637946_54638670_54638722_54641758
ES.35075.13	chr9	-	6758	8	ISM	ENSMUSG00000061559.16	ENSMUST00000118771.8	3372	11	-30	2425	5	-1	intron_retention	FALSE	canonical	3	904	junction_5	107.649468940935	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATTTGTGAACGTGC	5428	False	NA	-4	True	AATAAA	-18	NA	54641796	54624443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917
ES.35075.14	chr9	-	1130	10	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	353.900174248803	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATTTGTGAACGTGC	5428	False	NA	-4	True	AATAAA	-18	NA	54641796	54624443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54641758
ES.35075.16	chr9	-	6201	8	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	525	-2	intron_retention	FALSE	canonical	3	904	junction_5	83.0497760750891	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCATTTGTGAACGTG	5983	False	NA	-5	True	AATAAA	-17	NA	54641241	54624444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631759_54634872_54635046_54635453_54637946_54638670
ES.35075.18	chr9	-	3042	10	ISM	ENSMUSG00000061559.16	ENSMUST00000118771.8	3372	11	29	2426	29	-2	5prime_fragment	FALSE	canonical	3	544	junction_9	195.059978113729	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCATTTGTGAACGTG	5487	False	NA	-5	True	AATAAA	-17	NA	54641737	54624444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.19	chr9	-	1208	11	NNC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_6	352.273813957268	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCATTTGTGAACGT	5454	False	NA	-6	True	AATAAA	-16	NA	54641770	54624445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631708_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.2	chr9	-	5408	8	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	3	intron_retention	FALSE	non_canonical	0	0	junction_6	411.60720328478	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTGAACGTGCTGTT	5428	False	NA	0	True	AATAAA	-22	NA	54641796	54624439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54631429_54631609_54635046_54635453_54635562_54638658_54638722_54641758
ES.35075.20	chr9	-	3175	8	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_2	399.951935887812	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCATTTGTGAACGT	5440	False	NA	-6	True	AATAAA	-16	NA	54641784	54624445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54631334_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.22	chr9	-	4828	8	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	-1	2	intron_retention	FALSE	canonical	3	455	junction_7	247.255630752417	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCATTTGTGAACGT	5442	False	NA	-6	True	AATAAA	-16	NA	54641782	54624445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54630117_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54638722_54641758
ES.35075.24	chr9	-	3795	9	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	544	junction_8	206.133110816773	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5456	False	NA	-8	True	AATAAA	-14	NA	54641768	54624447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54638722_54641652
ES.35075.25	chr9	-	1201	10	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	353.900174248803	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5459	False	NA	-8	True	AATAAA	-14	NA	54641765	54624447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54641652
ES.35075.26	chr9	-	3794	9	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	544	junction_8	188.06078638302	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5456	False	NA	-8	True	AATAAA	-14	NA	54641768	54624447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631759_54634872_54635046_54635453_54637946_54638670_54638722_54641652
ES.35075.28	chr9	-	3733	10	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	544	junction_9	184.284669753544	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5459	False	NA	-8	True	AATAAA	-14	NA	54641765	54624447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.29	chr9	-	5462	9	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	455	junction_8	221.09920708813	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5439	False	NA	-8	True	AATAAA	-14	NA	54641785	54624447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35075.3	chr9	-	1225	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	-36	-2	-34	2	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5387	False	NA	-1	True	AATAAA	-21	NA	54641837	54624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35075.30	chr9	-	1172	11	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	368.836888068425	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCACCTGCATTTGTGAA	5442	False	NA	-9	True	AATAAA	-13	NA	54641782	54624448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54624720_54626524_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35075.31	chr9	-	5348	9	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	-2	intron_retention	FALSE	canonical	3	455	junction_8	215.166468983901	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCACCTGCATTTGTGA	5428	False	NA	-10	True	AATAAA	-12	NA	54641796	54624449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54637946_54638670_54638722_54641758
ES.35075.32	chr9	-	3468	6	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-3	1043	intron_retention	FALSE	canonical	3	544	junction_5	238.765994228659	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGGCCTAACATGGGT	5455	False	NA	NA	False	NA	NA	NA	54641769	54628765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.33	chr9	-	7157	3	NIC	ENSMUSG00000061559.16	novel	784	8	NA	NA	5	-960	intron_retention	FALSE	canonical	3	904	junction_1	74.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTGTCTGATCTCTCT	5428	False	NA	NA	False	AGTAAA	-16	NA	54641796	54631117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54631759_54634872_54635046_54635453
ES.35075.34	chr9	-	9252	2	NNC	ENSMUSG00000061559.16	novel	784	8	NA	NA	4	-2331	intron_retention	TRUE	non_canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCCCTGTAAATATCTA	5447	False	NA	NA	False	NA	NA	NA	54641777	54632488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54641413_54641449
ES.35075.4	chr9	-	1292	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	5	-7	3	2	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5426	False	NA	-1	True	AATAAA	-21	NA	54641798	54624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.5	chr9	-	1462	10	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-6	2	intron_retention	FALSE	canonical	3	105	junction_8	347.084363743969	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5432	False	NA	-1	True	AATAAA	-21	NA	54641792	54624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641652
ES.35075.6	chr9	-	9976	6	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	-2	2	intron_retention	FALSE	canonical	3	544	junction_5	238.978994892857	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5456	False	NA	-1	True	AATAAA	-21	NA	54641768	54624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ES.35075.7	chr9	-	3006	10	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	455	junction_9	219.907275633489	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTGTGAACGTGCTGT	5421	False	NA	-1	True	AATAAA	-21	NA	54641803	54624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35075.8	chr9	-	6601	8	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	455	junction_7	234.472573566936	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5428	False	NA	-3	True	AATAAA	-19	NA	54641796	54624442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35075.9	chr9	-	3084	8	NIC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	410.49427647704	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5428	False	NA	-3	True	AATAAA	-19	NA	54641796	54624442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_54626614_54627543_54627637_54631334_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ES.35076.1	chr9	-	222	1	Intergenic	novelGene_28463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCTTTGTGCCAGAC	2320	False	NA	NA	False	AAAAAG	-20	NA	54644904	54644682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54644700_54644900
ES.35077.1	chr9	+	180	1	Intergenic	novelGene_28464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGTGGA	NA	False	NA	NA	False	NA	NA	NA	54654601	54654781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54654600_54654800
ES.35078.1	chr9	+	898	6	NNC	ENSMUSG00000032291.9	novel	802	4	NA	NA	-856	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.190488823157	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCGGGCTCTTTCTTTG	NA	False	NA	17	True	ATTAAA	-13	NA	54671175	54680393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54671234_54671838_54671931_54672084_54672256_54672766_54672946_54675667_54675782_54680109
ES.35078.2	chr9	+	762	5	NNC	ENSMUSG00000032291.9	novel	802	4	NA	NA	-162	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.904100764423	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCATCTCCGGGCTCTTT	NA	False	NA	12	True	ATTAAA	-8	NA	54671869	54680388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54671931_54672126_54672256_54672766_54672946_54675667_54675782_54680109
ES.35078.3	chr9	+	805	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	-4	1	-4	-1	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCGGGCTCTTTCTTTG	NA	False	NA	17	True	ATTAAA	-13	NA	54672027	54680393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
ES.35078.4	chr9	+	5060	3	ISM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	70	0	70	0	intron_retention	FALSE	canonical	3	313	junction_1	10	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672101	54680394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54672256_54672766_54672946_54675667
ES.35079.1	chr9	-	158	1	Intergenic	novelGene_28465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAATAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	54696643	54696485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54696500_54696600
ES.3508.1	chr10	-	7199	1	Intergenic	novelGene_2689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGCACATGTGTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	86211233	86204034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_86204000_86211200
ES.35080.1	chr9	+	168	1	Intergenic	novelGene_28466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	4200	False	NA	NA	False	NA	NA	NA	54703756	54703924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54703800_54703900
ES.35081.1	chr9	-	152	1	Intergenic	novelGene_28467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	54705233	54705081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54705100_54705200
ES.35082.1	chr9	+	6432	1	Intergenic	novelGene_28468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	54710260	54716692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54710300_54716700
ES.35083.1	chr9	-	4313	1	FSM	ENSMUSG00000111686.2	ENSMUST00000213253.2	622	1	-2331	-1360	-2331	1360	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCTCCTGAGTCCTTTT	NA	False	NA	NA	False	AAGAAA	-27	NA	54734897	54730584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54730600_54734900
ES.35084.1	chr9	-	4550	2	Intergenic	novelGene_28469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGAACTTAGAATCTC	NA	False	NA	NA	False	NA	NA	NA	54763441	54750064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54754430_54763256
ES.35084.2	chr9	-	342	2	Intergenic	novelGene_28470	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54750484	54750093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54750260_54750308
ES.35084.3	chr9	-	178	1	Intergenic	novelGene_28471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCCATTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	54750484	54750306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54750300_54750500
ES.35084.4	chr9	-	1902	2	Intergenic	novelGene_28472	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCGTGCTTTCTTTCAA	NA	False	NA	NA	False	NA	NA	NA	54763422	54752693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54754430_54763256
ES.35085.1	chr9	-	157	1	Intergenic	novelGene_28473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	54766594	54766437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54766400_54766600
ES.35086.1	chr9	+	5877	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-102	-5	-102	5	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTGTGTTTTATAGTCA	2524	False	NA	19	True	AATAAA	-24	NA	54770970	54819819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.11	chr9	+	5446	20	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.5710922688428	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACTCGTTGTGTTTTA	2566	False	NA	13	True	AATAAA	-18	NA	54771012	54819813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772676_54789595_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.13	chr9	+	5633	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-54	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	68.0814952832266	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTGACTCGTTGTGT	2572	False	NA	9	True	AATAAA	-14	NA	54771018	54819809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816914
ES.35086.15	chr9	+	4396	18	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-53	6363	-53	20	5prime_fragment	FALSE	canonical	3	193	junction_6	40.0095144393773	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAATGGAGCTGATAAA	2573	False	NA	NA	False	NA	NA	NA	54771019	54813451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378
ES.35086.16	chr9	+	5320	23	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	65.4904099975935	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2577	False	NA	12	True	AATAAA	-17	NA	54771023	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914_54819089_54819585
ES.35086.17	chr9	+	2931	5	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-37	-1165	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	95.1078335364653	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	2589	False	NA	NA	False	NA	NA	NA	54771035	54810106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54791063_54809036
ES.35086.19	chr9	+	3236	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-35	-2478	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	66.0968505361159	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCCGTTCTAAAGCTG	2591	False	NA	24	True	AATAAA	-34	NA	54771037	54817336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816116_54816212_54816914
ES.35086.2	chr9	+	9097	20	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-101	4	intron_retention	FALSE	canonical	0	0	junction_15	67.826853048478	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTTGTGTTTTATAGTC	2525	False	NA	18	True	AATAAA	-23	NA	54770971	54819818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811355_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.20	chr9	+	5511	20	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	66.6523207094523	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2593	False	NA	11	True	AATAAA	-16	NA	54771039	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.21	chr9	+	5743	21	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-33	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.3422270635074	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTGACTCGTTGTGT	2593	False	NA	9	True	AATAAA	-14	NA	54771039	54819809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771175_54788595_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.22	chr9	+	5886	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-31	1	intron_retention	FALSE	canonical	3	193	junction_6	39.1107082523444	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCGTTGTGTTTTATA	2595	False	NA	15	True	AATAAA	-20	NA	54771041	54819815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814208_54816025_54816212_54816914
ES.35086.23	chr9	+	5707	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	66.0968505361159	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2596	False	NA	12	True	AATAAA	-17	NA	54771042	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816116_54816212_54816914
ES.35086.26	chr9	+	5819	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	66.8791511734263	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	2600	False	NA	12	True	AATAAA	-17	NA	54771046	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811149_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.28	chr9	+	3272	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-17	-2494	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	64.948994465551	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAGATTCATATGAAT	2609	False	NA	8	True	AATAAA	-18	NA	54771055	54817320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807393_54807754_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.29	chr9	+	5936	23	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.1013520392045	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATTTGACTCGTTGTG	2609	False	NA	8	True	AATAAA	-13	NA	54771055	54819808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54787509_54787665_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.3	chr9	+	5891	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-101	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.160424832818	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2525	False	NA	11	True	AATAAA	-16	NA	54770971	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811355_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.31	chr9	+	3039	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	15	-2497	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	64.8093164599041	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTGAAGATTCATATG	2641	False	NA	5	True	AATAAA	-15	NA	54771087	54817317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.32	chr9	+	5428	1	Intergenic	novelGene_28474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATCATGTGAAATT	1023	False	NA	NA	False	NA	NA	NA	54773983	54779411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54774000_54779400
ES.35086.33	chr9	+	7888	18	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-16074	-2500	intron_retention	FALSE	non_canonical	0	0	junction_14	70.5791170581347	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTGTTGAAGATTCAT	NA	False	NA	2	True	AATAAA	-12	NA	54788682	54817314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54788803_54789602_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54812235_54812902_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.34	chr9	+	5750	17	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	21384	1	-12300	-1	3prime_fragment	FALSE	canonical	3	193	junction_1	31.4322187412852	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACTCGTTGTGTTTTA	NA	False	NA	13	True	AATAAA	-18	NA	54792456	54819813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.36	chr9	+	4794	15	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	23478	2	-10206	-2	3prime_fragment	FALSE	canonical	3	222	junction_7	25.0127518498473	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	54794550	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.37	chr9	+	4851	16	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-10205	17717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	72.9809716448214	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAAACGGAGAGGCTT	NA	False	NA	NA	False	NA	NA	NA	54794551	54837531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914_54819813_54837473
ES.35086.38	chr9	+	2257	14	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-10086	-2503	intron_retention	FALSE	canonical	3	222	junction_7	23.2539364867581	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTTGTGTTGAAGATT	NA	False	NA	-1	True	AATAAA	-9	NA	54794670	54817311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814208_54816025_54816212_54816914
ES.35086.39	chr9	+	4680	14	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-6474	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.525563640334	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	NA	False	NA	12	True	AATAAA	-17	NA	54798282	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811355_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.4	chr9	+	3383	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	-92	2479	-92	-2479	multi-exon	FALSE	canonical	3	193	junction_6	38.4690587449917	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAGCCGTTCTAAAGCT	2534	False	NA	23	True	AATAAA	-33	NA	54770980	54817335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.40	chr9	+	4364	14	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-4942	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	78.1886657746588	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	NA	False	NA	11	True	AATAAA	-16	NA	54799814	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914_54818570_54818629
ES.35086.41	chr9	+	5473	4	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-3136	-1128	intron_retention	FALSE	canonical	3	275	junction_1	19.2930615046504	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATTAGGTAAAAGCATAT	NA	False	NA	NA	False	AAGAAA	-18	NA	54801620	54810143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54802780_54803723_54804907_54806671_54807391_54807731
ES.35086.42	chr9	+	4268	11	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	32649	2	-1035	-2	3prime_fragment	FALSE	canonical	3	222	junction_3	29.4251593028823	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGACTCGTTGTGTTTT	1933	False	NA	12	True	AATAAA	-17	NA	54803721	54819812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.43	chr9	+	2774	4	ISM	ENSMUSG00000032293.9	ENSMUST00000214023.2	674	6	23	1135	23	-1135	5prime_fragment	FALSE	canonical	3	222	junction_2	40.5490101262931	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAATGATTAGGTAAA	2991	False	NA	NA	False	AAGAAA	-11	NA	54804779	54810136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54804907_54806671_54806757_54807233_54807391_54807731
ES.35086.44	chr9	+	3981	8	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	36072	-5	-2344	5	3prime_fragment	FALSE	canonical	3	236	junction_5	26.5967621168826	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTGTGTTTTATAGTCA	5356	False	NA	19	True	AATAAA	-24	NA	54807144	54819819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.45	chr9	+	3922	7	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-1757	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	105.646685808038	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTCCACTTAAACAGT	5943	False	NA	NA	False	AATAAA	-15	NA	54807731	54820011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816919
ES.35086.46	chr9	+	5148	6	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	38559	0	143	0	3prime_fragment	FALSE	canonical	3	236	junction_3	24.9751876869825	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	7843	False	NA	14	True	AATAAA	-19	NA	54809631	54819814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.47	chr9	+	3903	6	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	1408	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.493497568244	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	9108	False	NA	11	True	AATAAA	-16	NA	54810896	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54811280_54811355_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.48	chr9	+	2301	2	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	39979	6363	1563	20	internal_fragment	FALSE	canonical	3	294	junction_1	0	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCAAATGGAGCTGATAAA	9263	False	NA	NA	False	NA	NA	NA	54811051	54813451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54811280_54811378
ES.35086.49	chr9	+	6275	4	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	2595	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	118.954706599706	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACTCGTTGTGTTTTA	NA	False	NA	13	True	AATAAA	-18	NA	54812083	54819813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54812235_54812902_54814001_54814084_54816212_54816914
ES.35086.5	chr9	+	5679	22	NNC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-81	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.3472962434858	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2545	False	NA	11	True	AATAAA	-16	NA	54770991	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791349_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.50	chr9	+	5113	2	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	4503	-7	intron_retention	FALSE	canonical	3	266	junction_1	0	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACATTTGACTCGTTGT	NA	False	NA	7	True	AATAAA	-12	NA	54813991	54819807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54816212_54816914
ES.35086.51	chr9	+	5167	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-55	-2	-55	2	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTGGTCTTTTTTTCTC	NA	False	NA	15	True	ATTAAA	-28	NA	54824511	54857210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
ES.35086.52	chr9	+	3392	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	-48	1766	-48	-1766	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGGGTGTCTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	54824518	54855442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
ES.35086.53	chr9	+	5186	6	NNC	ENSMUSG00000035878.14	novel	5110	5	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.72021504754765	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATTTTACCTTTTGG	NA	False	NA	3	True	ATTAAA	-16	NA	54824566	54857198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54825143_54825530_54825617_54827757_54828109_54829478_54829619_54844422_54844607_54853349
ES.35086.54	chr9	+	1633	5	NNC	ENSMUSG00000035878.14	novel	5110	5	NA	NA	-9	-4922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.35410196624968	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATTTGTGATGATCTG	NA	False	NA	NA	False	CATAAA	-17	NA	54824621	54852286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54851849
ES.35086.55	chr9	+	2307	13	Fusion	ENSMUSG00000032301.14_ENSMUSG00000035878.14	novel	5110	5	NA	NA	-1	-1	multi-exon	FALSE	canonical	0	0	junction_5	915.233041816855	317	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATGGTGAAAGGATACT	NA	False	NA	1	True	AATAAA	-14	NA	54824629	54865313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349_54853419_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.56	chr9	+	152	1	ISM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	30355	2135	30291	-2135	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATATTCACATATTTTG	NA	False	NA	NA	False	NA	NA	NA	54854921	54855073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54854900_54855100
ES.35086.57	chr9	+	5542	4	FSM	ENSMUSG00000032301.14	ENSMUST00000164679.2	832	4	-108	-4602	-8	-2	multi-exon	FALSE	canonical	3	1789	junction_3	37.2111094522411	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTATGGTGAAAGGATAC	NA	False	NA	0	True	AATAAA	-13	NA	54858065	54865312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962
ES.35086.58	chr9	+	1186	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	-7	-14	-7	14	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTCTCTGTGGCAACA	NA	False	NA	16	True	AATAAA	-29	NA	54858066	54865328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.59	chr9	+	5370	3	NIC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1650	junction_2	90	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTGAAAGGATACTTT	NA	False	NA	3	True	AATAAA	-16	NA	54858067	54865315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858188_54859365_54864219_54864918
ES.35086.6	chr9	+	5670	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-66	53	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	64.8093164599041	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGAAATCTCTCATCAAA	2560	False	NA	67	True	AATAAA	-18	NA	54771006	54819867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35086.60	chr9	+	2980	8	NIC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	1	-5	intron_retention	FALSE	canonical	3	1650	junction_7	113.995882489193	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGTTATGGTGAAAGGA	NA	False	NA	-3	True	AATAAA	-10	NA	54858074	54865309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.61	chr9	+	7230	1	NIC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	2	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATGGTGAAAGGATACT	NA	False	NA	1	True	AATAAA	-14	NA	54858083	54865313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858100_54865300
ES.35086.62	chr9	+	577	6	FSM	ENSMUSG00000032301.14	ENSMUST00000169008.8	562	6	4	-19	4	19	multi-exon	FALSE	canonical	3	1724	junction_4	75.8957179292745	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTGTTAAGGTTGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	54858092	54862335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164
ES.35086.63	chr9	+	5080	5	NIC	ENSMUSG00000032301.14	novel	828	9	NA	NA	0	-8	intron_retention	FALSE	canonical	3	1789	junction_3	74.4525855830407	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTGGTTATGGTGAAA	NA	False	NA	-6	True	AATAAA	-7	NA	54858098	54865306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54863672_54864094
ES.35086.64	chr9	+	3123	6	NIC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	737.182311236508	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTATGGTGAAAGGATAC	NA	False	NA	0	True	AATAAA	-13	NA	54858098	54865312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858188_54859365_54859393_54859624_54862025_54862164_54862254_54864094_54864219_54864918
ES.35086.65	chr9	+	1180	9	NNC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_3	615.434488288559	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATACTTTCTCTGTGG	NA	False	NA	11	True	AATAAA	-24	NA	54858100	54865323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_54858188_54859365_54859393_54859624_54859701_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.67	chr9	+	1395	9	NIC	ENSMUSG00000032301.14	novel	828	9	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	620.735740371859	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATGGTGAAAGGATACT	NA	False	NA	1	True	AATAAA	-14	NA	54858367	54865313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54858713_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.68	chr9	+	1116	8	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	1226	1	912	-1	3prime_fragment	FALSE	canonical	3	1650	junction_7	124.551603927113	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTATGGTGAAAGGATACT	NA	False	NA	1	True	AATAAA	-14	NA	54859299	54865313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ES.35086.69	chr9	+	651	3	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	5465	2	5151	-2	3prime_fragment	FALSE	canonical	3	1650	junction_2	169	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTATGGTGAAAGGATAC	NA	False	NA	0	True	AATAAA	-13	NA	54863538	54865312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54863672_54864094_54864219_54864918
ES.35086.9	chr9	+	5757	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	-60	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	66.4627715341453	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGACTCGTTGTGTTT	2566	False	NA	11	True	AATAAA	-16	NA	54771012	54819811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ES.35087.1	chr9	-	181	1	Intergenic	novelGene_28475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATATTATTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	54782289	54782108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54782100_54782300
ES.35088.1	chr9	-	4854	1	Antisense	novelGene_ENSMUSG00000032293.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCCCCCCCAAACAAAC	7216	False	NA	NA	False	NA	NA	NA	54795803	54790949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_54790900_54795800
ES.35089.1	chr9	-	995	1	Intergenic	novelGene_28476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTGAAAAAGAAAAATAGA	5001	False	NA	NA	False	AAAAAG	-10	NA	54798018	54797023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54797000_54798000
ES.3509.1	chr10	+	385	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	8	1229	8	96	multi-exon	FALSE	canonical	3	71	junction_1	95.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	NA	False	AGTAAA	-20	NA	86521396	86524589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86521473_86521743_86521861_86524397
ES.3509.2	chr10	+	1613	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	9	0	9	0	multi-exon	FALSE	canonical	3	71	junction_1	95.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521397	86525818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86521473_86521743_86521861_86524397
ES.3509.3	chr10	+	4378	1	NIC	ENSMUSG00000097412.3	novel	323	4	NA	NA	-20	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGTGTATGAGTGTAT	NA	False	NA	5	True	AGTAAA	-14	NA	86521444	86525822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_86521400_86525800
ES.3509.4	chr10	+	1689	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	-24	0	-14	0	multi-exon	FALSE	canonical	3	53	junction_1	104.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521450	86525818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86521602_86521743_86521861_86524397
ES.3509.5	chr10	+	403	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	24	1238	24	87	multi-exon	FALSE	canonical	3	53	junction_1	104.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTTAATTTAGGGGG	NA	False	NA	NA	False	AGTAAA	-11	NA	86521498	86524580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86521602_86521743_86521861_86524397
ES.35090.1	chr9	-	137	1	Intergenic	novelGene_28477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAATAACA	73	False	NA	NA	False	NA	NA	NA	54849993	54849856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_54849900_54850000
ES.35091.1	chr9	-	1030	1	FSM	ENSMUSG00000044820.7	ENSMUST00000054018.7	769	1	270	-531	270	531	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTTCACATGTGAATGA	NA	False	NA	NA	False	AATAAA	-23	NA	54858012	54856982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_54857000_54858000
ES.35092.1	chr9	+	3766	1	Intergenic	novelGene_28478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTGCTTGCATATAC	6590	False	NA	NA	False	NA	NA	NA	54870445	54874211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54870400_54874200
ES.35093.1	chr9	+	2142	6	FSM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	-101	-304	-34	211	multi-exon	FALSE	canonical	1	1	junction_4	1.2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCTTACTGGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	54888715	54914413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54912444_54913697
ES.35093.2	chr9	+	616	3	ISM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	-82	6181	-15	2563	5prime_fragment	FALSE	canonical	1	3	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTATACTGTGCATAT	NA	False	NA	NA	False	AATAAA	-25	NA	54888734	54907928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_54889006_54905295_54905448_54907735
ES.35093.3	chr9	+	6399	6	FSM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	-72	-4590	-5	3636	multi-exon	FALSE	canonical	1	1	junction_4	1.2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCTGTTAGCTATC	NA	False	NA	NA	False	NA	NA	NA	54888744	54918699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54912444_54913697
ES.35094.1	chr9	+	173	1	Intergenic	novelGene_28479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	54935041	54935214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_54935000_54935200
ES.35095.1	chr9	-	3496	8	NNC	ENSMUSG00000035200.8	novel	3723	6	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.19522860933439	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTATAACCATCATTG	NA	False	NA	NA	False	AATAAA	-22	NA	54955816	54935437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54937530_54941925_54942708_54942807_54942917_54943675_54943786_54943870_54943916_54951060_54951210_54954672_54954793_54955727
ES.35095.2	chr9	-	2273	6	NNC	ENSMUSG00000035200.8	novel	3723	6	NA	NA	4487	-1181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.2	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCTCCTGCTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	54951576	54936618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_54937530_54941925_54942917_54943675_54943786_54943870_54943916_54951060_54951210_54951509
ES.35096.1	chr9	+	210	1	Intergenic	novelGene_28480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCCTCTGACCTCATCA	NA	False	NA	NA	False	NA	NA	NA	55023985	55024195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55024000_55024200
ES.35097.1	chr9	+	179	1	Intergenic	novelGene_28481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	55024346	55024525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55024300_55024500
ES.35098.1	chr9	+	187	1	Intergenic	novelGene_28482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTGTTTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55049417	55049604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55049400_55049600
ES.35099.1	chr9	+	3329	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	127	0	127	0	multi-exon	TRUE	canonical	3	762	junction_1	63.2035402489449	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056264	55114813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.10	chr9	+	2762	11	NIC	ENSMUSG00000032307.17	novel	1680	12	NA	NA	-17	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	251.272839757901	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.11	chr9	+	2934	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	237.121276987115	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087908_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.12	chr9	+	2826	12	FSM	ENSMUSG00000032307.17	ENSMUST00000121677.8	1680	12	-17	-1129	-17	-1	multi-exon	FALSE	canonical	3	92	junction_2	214.811583786642	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCACCTTTCCCTCT	NA	False	NA	9	True	AATAAA	-17	NA	55056661	55114812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.13	chr9	+	5910	11	NIC	ENSMUSG00000032307.17	novel	1680	12	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	92	junction_2	219.83002524678	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTCACCTTTCCCT	NA	False	NA	7	True	AATAAA	-15	NA	55056661	55114810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.14	chr9	+	1806	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	313.485634528212	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGTTTAGAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	55056661	55113681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087908_55090385_55090467_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.15	chr9	+	2194	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	524	738	-17	-17	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGACTCTTTGAGCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	55056661	55114075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.17	chr9	+	2833	12	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	248.214017225272	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.18	chr9	+	6015	12	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	762	junction_1	61.9108930454565	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTCACCTTTCCCT	NA	False	NA	7	True	AATAAA	-15	NA	55056661	55114810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.19	chr9	+	3739	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	524	-807	-17	807	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTTGTTCATGTTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	55056661	55115620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.2	chr9	+	1913	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	412	1131	-129	-1	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGGTTTAGAAATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	55056549	55113682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.20	chr9	+	2874	12	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-16	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	246.15324797289	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056662	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102707_55102804_55110984_55111052_55113243
ES.35099.21	chr9	+	2935	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	239.093194289498	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056662	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083544_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.22	chr9	+	3531	20	Fusion	ENSMUSG00000032307.17_ENSMUSG00000032309.16	novel	3456	13	NA	NA	-16	0	multi-exon	FALSE	canonical	0	0	junction_9	355.886346201624	1107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55056662	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55099446_55099563_55102270_55102320_55102707_55102804_55110984_55111052_55113243_55113452_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.24	chr9	+	2595	8	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-16	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	366.482786298431	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056662	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55113243
ES.35099.25	chr9	+	1935	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	525	996	-16	134	multi-exon	FALSE	canonical	3	762	junction_1	63.2035402489449	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTAAAAGTATGATCGTA	NA	False	NA	NA	False	ATTAAA	-39	NA	55056662	55113817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.26	chr9	+	6600	18	Fusion	ENSMUSG00000032307.17_ENSMUSG00000032309.16	novel	3456	13	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_13	220.776829183903	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55056662	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.27	chr9	+	3313	19	Fusion	ENSMUSG00000032307.17_ENSMUSG00000032309.16	novel	3456	13	NA	NA	-16	0	multi-exon	FALSE	non_canonical	0	0	junction_14	332.008199363275	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55056662	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243_55113452_55116636_55116776_55121192_55121281_55122186_55122283_55125702_55125764_55128305_55128472_55130523
ES.35099.28	chr9	+	3636	12	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	762	junction_1	63.6797254863471	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056662	55114813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.29	chr9	+	2648	12	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-12	-188	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	248.214017225272	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAATACATTATTGAAT	NA	False	NA	NA	False	NA	NA	NA	55056666	55114625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.3	chr9	+	2822	11	NIC	ENSMUSG00000032307.17	novel	1680	12	NA	NA	-122	-8	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	245.384188569679	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056556	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.30	chr9	+	6387	11	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	4	-8	intron_retention	FALSE	canonical	3	6	junction_5	254.94722983394	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056682	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087908_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55102804_55110984_55111052_55113243
ES.35099.31	chr9	+	2823	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	112	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	366.779906756082	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTCACCTTTCCCTCT	NA	False	NA	9	True	AATAAA	-17	NA	55056790	55114812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55083474_55083532_55087756_55087908_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55099446_55099563_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.32	chr9	+	2828	13	NNC	ENSMUSG00000032307.17	novel	2081	13	NA	NA	-24	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	316.811414286516	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55057342	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057686_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087908_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.33	chr9	+	2812	13	FSM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	-10	-721	-10	0	multi-exon	FALSE	canonical	2	4	junction_1	238.508371038745	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55057356	55114813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55057686_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.34	chr9	+	2476	12	ISM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	12884	-713	12884	-8	3prime_fragment	FALSE	canonical	3	776	junction_1	62.0836545742054	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55070250	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.35	chr9	+	3038	5	ISM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	40554	-713	-4208	-8	3prime_fragment	FALSE	canonical	3	789	junction_3	46.5906374714921	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55097920	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.36	chr9	+	2180	2	ISM	ENSMUSG00000032307.17	ENSMUST00000148468.2	993	3	8305	-1311	8305	-8	3prime_fragment	FALSE	canonical	3	809	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55110433	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_55111052_55113243
ES.35099.37	chr9	+	1378	1	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	8775	-1213	mono-exon	FALSE	NA	NA	NA	NA	NA	568	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55110903	55112281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55110900_55112300
ES.35099.38	chr9	+	1563	1	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	11114	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	582	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55113242	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55113200_55114800
ES.35099.39	chr9	+	2096	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	16	0	16	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116224	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.4	chr9	+	3350	17	Fusion	ENSMUSG00000032307.17_ENSMUSG00000032309.16	novel	3456	13	NA	NA	-94	0	multi-exon	FALSE	canonical	0	0	junction_9	351.095228356923	1107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55056584	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55110984_55111052_55113243_55113452_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.41	chr9	+	2537	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	31	-456	-30	456	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGCTGGTTTGTCACA	NA	False	NA	NA	False	AATAAA	-23	NA	55116239	55132173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.42	chr9	+	4517	6	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-30	0	intron_retention	FALSE	non_canonical	0	0	junction_2	498.10079301282	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116239	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125704_55128472_55130523
ES.35099.43	chr9	+	2043	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	482.415363906803	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGGTGTTGTAATTATT	NA	False	NA	8	True	AATAAA	-15	NA	55116240	55131714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116638_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128440_55130523
ES.35099.44	chr9	+	2338	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-29	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	461.943599250914	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGCTGGTTTGTCACA	NA	False	NA	NA	False	AATAAA	-23	NA	55116240	55132173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116275_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.45	chr9	+	1966	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	33	113	-28	-104	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTTCCTCTTCATAGT	NA	False	NA	NA	False	TATAAA	-20	NA	55116241	55131604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.46	chr9	+	4785	5	NIC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_1	425.306580598043	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116241	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55116776_55121192_55121281_55122186_55122283_55125598_55128472_55130523
ES.35099.47	chr9	+	7933	5	NIC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_2	440.283147531222	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116243	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55128472_55130523
ES.35099.48	chr9	+	1766	5	NIC	ENSMUSG00000032309.16	novel	1921	7	NA	NA	-25	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	436.43577706233	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCAACTGGTGTTGTAAT	NA	False	NA	4	True	AATAAA	-11	NA	55116244	55131710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55116473_55116636_55116776_55125717_55125764_55128305_55128472_55130523
ES.35099.49	chr9	+	2124	8	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	380.023092746228	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116246	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121013_55121066_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.5	chr9	+	2722	10	NIC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-52	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	269.12468999598	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056626	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.50	chr9	+	6527	6	NIC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	351	junction_1	253.435119902511	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116247	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55121066_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.51	chr9	+	1964	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	474.826781281577	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116250	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125702_55125764_55128305_55128472_55130523
ES.35099.53	chr9	+	2048	7	NNC	ENSMUSG00000032309.16	novel	1979	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	454.747090883127	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116262	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116465_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.54	chr9	+	2088	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	461.805875522028	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116262	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128504_55130523
ES.35099.56	chr9	+	6343	7	NIC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	351	junction_2	240.189277214635	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGTGTTGTAATTAT	NA	False	NA	7	True	AATAAA	-14	NA	55116263	55131713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55116473_55116636_55121066_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.58	chr9	+	1997	7	NNC	ENSMUSG00000032309.16	novel	1979	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	461.23942324519	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116265	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116417_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.59	chr9	+	2026	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	369.828526331987	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116265	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116749_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.6	chr9	+	2660	10	NIC	ENSMUSG00000032307.17	novel	1680	12	NA	NA	-17	-8	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	263.544640958183	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55057111_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.60	chr9	+	6163	8	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	380.023092746228	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116273	55131717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116863_55117036_55121066_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.61	chr9	+	2498	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	29	486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	454.747090883127	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAGAAATGCCAACTGC	NA	False	NA	NA	False	ATTAAA	-34	NA	55116300	55132203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116465_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.62	chr9	+	2024	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	464.422490842121	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGTGTTGTAATTAT	NA	False	NA	7	True	AATAAA	-14	NA	55116300	55131713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122178_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.64	chr9	+	2348	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	47	450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	474.826781281577	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTAATTGCTGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	55116318	55132167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125702_55125764_55128305_55128472_55130523
ES.35099.65	chr9	+	2449	7	NNC	ENSMUSG00000032309.16	novel	2009	6	NA	NA	70	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	392.806744963588	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGCTGGTTTGTCACA	NA	False	NA	NA	False	AATAAA	-23	NA	55116543	55132173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55116776_55121013_55121066_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.66	chr9	+	1770	5	ISM	ENSMUSG00000032309.16	ENSMUST00000146201.8	2009	6	4656	0	183	0	3prime_fragment	FALSE	canonical	3	906	junction_2	43.7207044773983	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55121129	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ES.35099.67	chr9	+	6805	1	NIC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	3964	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55124910	55131715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55124900_55131700
ES.35099.7	chr9	+	2909	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	239.57408677809	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092968_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.35099.9	chr9	+	2945	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	302.007024844714	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTTGTCACCTT	NA	False	NA	2	True	AATAAA	-10	NA	55056661	55114805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099216_55099297_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ES.351.1	chr1	+	533	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	-22	538	-22	7	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTCCTTTCTGTTG	NA	False	NA	33	True	AATAAA	-22	NA	39406900	39410454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.12	chr1	+	3195	2	NIC	ENSMUSG00000073702.12	novel	468	3	NA	NA	8	0	intron_retention	FALSE	canonical	3	8615	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407017	39410447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39410148_39410382
ES.351.13	chr1	+	845	3	FSM	ENSMUSG00000073702.12	ENSMUST00000191855.2	468	3	165	-542	165	-3	multi-exon	FALSE	canonical	3	8615	junction_2	1847	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGGTTTGAACATG	NA	False	NA	7	True	ATTAAA	-20	NA	39409095	39410989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39409221_39410034_39410148_39410382
ES.351.14	chr1	+	4495	1	Genic_Genomic	ENSMUSG00000073702.12	novel	NA	NA	NA	NA	1336	3769	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAACCATGACAGTA	NA	False	NA	NA	False	NA	NA	NA	39410266	39414761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_39410300_39414800
ES.351.2	chr1	+	1157	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	20	-128	-16	128	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGATCTCTTGTTTCT	NA	False	NA	NA	False	AATACA	-17	NA	39406942	39411120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.4	chr1	+	1337	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	55	-343	19	343	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGACTGAGGTGGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	39406977	39411335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.5	chr1	+	559	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	68	422	-19	123	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTTTTCACAGAAGTCA	NA	False	NA	16	True	NA	NA	NA	39406990	39410570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.6	chr1	+	512	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	-18	-7	-18	5	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTTTCCTTTCTGT	NA	False	NA	31	True	AATAAA	-20	NA	39406991	39410452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.7	chr1	+	644	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	-10	-4	-10	3	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTTGGTTTTCCTTTCT	NA	False	NA	29	True	AATAAA	-18	NA	39406999	39410450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
ES.351.9	chr1	+	3442	1	NIC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	-5	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGGTTTGGTTTTCCT	NA	False	NA	25	True	AATAAA	-14	NA	39407004	39410446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39407000_39410400
ES.3510.1	chr10	+	1735	1	Antisense	novelGene_ENSMUSG00000020048.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGTATAAATGTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	86536402	86538137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_86536400_86538100
ES.35100.1	chr9	+	176	1	Intergenic	novelGene_28485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	55135822	55135998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55135800_55136000
ES.35101.1	chr9	+	202	1	Intergenic	novelGene_28488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTAATAAAAACAGATGG	9559	False	NA	NA	False	NA	NA	NA	55159625	55159827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55159600_55159800
ES.35102.1	chr9	-	1552	1	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCCCAGCACTTAACACA	NA	False	NA	NA	False	AATAAA	-17	NA	55057317	55055765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_55055800_55057300
ES.35103.1	chr9	-	3612	12	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAACATGATAGAATTAC	NA	False	NA	NA	False	NA	NA	NA	55113350	55067659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_55070353_55075485_55075588_55083470_55083532_55087756_55087898_55090385_55090469_55092185_55092249_55092953_55093043_55099123_55099184_55102269_55102318_55102705_55102802_55110982_55111051_55113242
ES.35103.3	chr9	-	160	1	Intergenic	novelGene_28483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	55070920	55070760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55070800_55070900
ES.35103.4	chr9	-	4507	1	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGTGTGGTGGCGCA	NA	False	NA	NA	False	TATAAA	-38	NA	55113350	55108843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_55108800_55113400
ES.35103.5	chr9	-	2287	2	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-10	NA	55113350	55108871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_55111051_55113242
ES.35103.6	chr9	-	178	1	Intergenic	novelGene_28484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTTTCATGG	NA	False	NA	NA	False	NA	NA	NA	55109823	55109645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55109600_55109800
ES.35104.1	chr9	-	3783	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-24	1834	intron_retention	FALSE	canonical	0	0	junction_5	9.20869154657707	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAGCAAAACCAGA	223	False	NA	NA	False	AATAAA	-38	NA	55149769	55125671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128897_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
ES.35104.10	chr9	-	2078	9	NNC	ENSMUSG00000032311.18	novel	1878	8	NA	NA	-8513	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.92050345622044	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGCTCATCCTGGAATTA	5573	False	NA	NA	False	AATAAA	-18	NA	55199422	55127514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128693_55132686_55132877_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55156379_55156454_55189834_55189901_55199304
ES.35104.11	chr9	-	6036	7	NNC	ENSMUSG00000032311.18	novel	1878	8	NA	NA	-8522	-1	intron_retention	FALSE	canonical	1	1	junction_5	8.1598611099291	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGCTTGATTCCTCT	5564	False	NA	-2	True	NA	NA	NA	55199431	55128582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55156379_55156454_55189834_55189901_55199304
ES.35104.12	chr9	-	678	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-8516	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	6.62117814289874	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATACTCTGCTTGATT	5570	False	NA	-7	True	NA	NA	NA	55199425	55128587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128693_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55199304
ES.35104.13	chr9	-	1852	6	NIC	ENSMUSG00000032311.18	novel	2095	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	8.81816307401944	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCTCAAACCAGTTC	252	False	NA	NA	False	AGTAAA	-30	NA	55149740	55131515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55132877_55133899_55134001_55135136_55135223_55143723_55143804_55149344_55149492_55149663
ES.35104.14	chr9	-	1370	6	NIC	ENSMUSG00000032311.18	novel	2095	9	NA	NA	-44	-569	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	7.75628777186613	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATCCTGCAACAAGT	203	False	NA	NA	False	AATACA	-16	NA	55149789	55132084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55132877_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
ES.35104.15	chr9	-	292	1	Intergenic	novelGene_28486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAACTTGGAGACTGTT	9968	False	NA	NA	False	TTTAAA	-12	NA	55140024	55139732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55139700_55140000
ES.35104.16	chr9	-	179	1	Intergenic	novelGene_28487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTG	9968	False	NA	NA	False	NA	NA	NA	55140024	55139845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55139800_55140000
ES.35104.2	chr9	-	2916	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-8505	1167	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	6.62117814289874	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAGCTTAAGTTTTTCA	5581	False	NA	NA	False	AATAAA	-18	NA	55199414	55126338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128693_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55199304
ES.35104.3	chr9	-	7249	8	NNC	ENSMUSG00000032311.18	novel	1878	8	NA	NA	-8516	1165	intron_retention	FALSE	canonical	1	1	junction_6	7.57277616039918	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCTTAAGTTTTT	5570	False	NA	NA	False	AATAAA	-16	NA	55199425	55126340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55132877_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55156379_55156454_55189834_55189901_55199304
ES.35104.4	chr9	-	2989	7	NNC	ENSMUSG00000032311.18	novel	1878	8	NA	NA	-8516	1163	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	7.27247474309048	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGAGCTTAAGTTT	5570	False	NA	NA	False	AATAAA	-14	NA	55199425	55126342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128693_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55189834_55189901_55199304
ES.35104.6	chr9	-	3095	6	NNC	ENSMUSG00000032311.18	novel	721	6	NA	NA	-9	1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.20869154657707	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGAGCTTAAGT	238	False	NA	NA	False	AATAAA	-12	NA	55149754	55126344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55128897_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55149663
ES.35104.7	chr9	-	2788	5	NIC	ENSMUSG00000032311.18	novel	721	6	NA	NA	227	1160	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	8.12403840463596	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTTAAGAGCTTAAG	474	False	NA	NA	False	AATAAA	-11	NA	55149518	55126345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55128693_55133899_55134001_55135136_55135223_55143723_55143804_55149344
ES.35104.8	chr9	-	7135	6	NNC	ENSMUSG00000032311.18	novel	2095	9	NA	NA	-8550	1157	intron_retention	FALSE	canonical	1	4	junction_5	6.32455532033676	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTTTTAAGAGCTT	5536	False	NA	NA	False	AATAAA	-8	NA	55199459	55126348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55132877_55133899_55134039_55135136_55135223_55143723_55143804_55149344_55149492_55199304
ES.35104.9	chr9	-	1234	1	NIC	ENSMUSG00000032311.18	novel	1878	8	NA	NA	20999	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCCTGGAATTACT	NA	False	NA	NA	False	AATAAA	-20	NA	55128746	55127512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55127500_55128700
ES.35105.1	chr9	+	2292	11	NNC	ENSMUSG00000032313.12	novel	2408	11	NA	NA	6	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.98997487421324	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATCTGGCTAGTAGAG	NA	False	NA	NA	False	AATAAA	-14	NA	55234238	55345625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_55234285_55284763_55284898_55287962_55288152_55305024_55305074_55307857_55307932_55321147_55321205_55322223_55322363_55325291_55325408_55337558_55337749_55342474_55342538_55344390
ES.35105.2	chr9	+	176	1	Intergenic	novelGene_28489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	55254591	55254767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55254600_55254800
ES.35105.3	chr9	+	181	1	Intergenic	novelGene_28490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	55273262	55273443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55273300_55273400
ES.35106.1	chr9	+	3909	1	Antisense	novelGene_ENSMUSG00000032314.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGGAG	NA	False	NA	NA	False	NA	NA	NA	55389630	55393539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_55389600_55393500
ES.35107.1	chr9	-	1411	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	55	-74	55	74	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTGGTGGCAGTCAC	NA	False	NA	61	True	AATAAA	-39	NA	55419472	55361717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.10	chr9	-	1290	12	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	12	-39	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	483.577354568263	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAATAAAAAACATAATA	NA	False	NA	-52	True	NA	NA	NA	55419080	55361830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55418930
ES.35107.11	chr9	-	5590	12	NNC	ENSMUSG00000032314.15	novel	828	8	NA	NA	-61	-1510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	486.601403224276	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGACTCTGTTGGGGAG	NA	False	NA	NA	False	AATAAA	-19	NA	55419465	55363301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55367817_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.12	chr9	-	5728	1	Intergenic	novelGene_28491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATGGTTATGCTAACA	NA	False	NA	NA	False	NA	NA	NA	55379410	55373682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55373700_55379400
ES.35107.13	chr9	-	4041	7	NNC	ENSMUSG00000032314.15	novel	828	8	NA	NA	-8310	1621	intron_retention	TRUE	non_canonical	0	0	junction_1	603.860014131311	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACAACTTGGAAATAGT	8157	False	NA	NA	False	NA	NA	NA	55403107	55380199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55380389_55386930_55389640_55392553_55392623_55393985_55394795_55396113_55396214_55402845_55402929_55403025
ES.35107.14	chr9	-	1027	10	NIC	ENSMUSG00000032314.15	novel	828	8	NA	NA	-60	-19	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	512.416304517921	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCAGGCTCATTGGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	55419464	55381839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55381940_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.15	chr9	-	4754	10	NNC	ENSMUSG00000032314.15	novel	828	8	NA	NA	-40	-486	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	525.731025440872	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATGCTGTGCCTAAGA	NA	False	NA	NA	False	TATAAA	-15	NA	55419444	55382306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55386154_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.16	chr9	-	1689	1	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	24	-21582	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAACCTCACCATTTCCC	NA	False	NA	NA	False	NA	NA	NA	55419380	55417691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55417700_55419400
ES.35107.3	chr9	-	2546	13	NNC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	-32	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	623.913516754437	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAGAAACATGCCTAGC	NA	False	NA	-8	True	AATAAA	-35	NA	55419436	55361786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55408275_55408431_55418229
ES.35107.4	chr9	-	1100	10	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	-40	4	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	537.115018603908	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATCAGAAACATGCCTAG	NA	False	NA	-9	True	AATAAA	-34	NA	55419444	55361787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.5	chr9	-	1023	9	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	61	4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	553.830693894804	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATCAGAAACATGCCTAG	NA	False	NA	-9	True	AATAAA	-34	NA	55419466	55361787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55419314
ES.35107.6	chr9	-	1163	10	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	526.350561489438	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTACTATCAGAAACAT	NA	False	NA	-15	True	AATAAA	-28	NA	55419447	55361793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55362047_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35107.8	chr9	-	1340	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	20	32	20	-32	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACATAATAAAGTTTT	NA	False	NA	-45	True	NA	NA	NA	55419507	55361823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ES.35108.1	chr9	+	4653	1	Intergenic	novelGene_28492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACAACAACAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	55474550	55479203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55474600_55479200
ES.35109.1	chr9	+	3115	2	Antisense	novelGene_ENSMUSG00000034007.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACTAGAGTGTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	55835137	55839949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_55835629_55837325
ES.3511.1	chr10	+	1989	4	NIC	ENSMUSG00000044937.16	novel	1949	6	NA	NA	-12	-4347	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATGTTGAAAGCC	NA	False	NA	NA	False	AATAAA	-28	NA	86541695	86556084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_86541882_86544426_86544512_86548628_86549604_86555341
ES.3511.2	chr10	+	4333	16	FSM	ENSMUSG00000044937.16	ENSMUST00000075632.14	4366	16	32	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTTTTTACTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	86541706	86612707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86541882_86548628_86549604_86555341_86555529_86560061_86560277_86565645_86565807_86566694_86567131_86569418_86569659_86572664_86572864_86580289_86580469_86586110_86586251_86594121_86594294_86594952_86595101_86596629_86596783_86599727_86599862_86611793_86611924_86612018
ES.3511.3	chr10	+	5622	4	NNC	ENSMUSG00000044937.16	novel	2206	5	NA	NA	2573	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTTTTTTTTAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-37	NA	86544280	86560443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86547426_86547695_86549604_86555341_86555529_86560061
ES.3511.4	chr10	+	153	1	Intergenic	novelGene_2690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	86564900	86565053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_86564900_86565100
ES.3511.5	chr10	+	4019	5	NNC	ENSMUSG00000044937.16	novel	4366	16	NA	NA	-6976	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.866025403784439	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTTTTTACTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	86565773	86612707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86565807_86566694_86569659_86572660_86572864_86611793_86611924_86612018
ES.35110.1	chr9	-	5245	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-21	7	-3	-3	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGCCAAGCACTGC	NA	False	NA	NA	False	AATAAA	-12	NA	55845406	55457169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.10	chr9	-	4969	34	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-1	-369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	17.8299281010372	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAGTATCAAGTATTT	NA	False	NA	-8	True	AATAAA	-12	NA	55845386	55457535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55844363_55844474_55845353
ES.35110.12	chr9	-	4923	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-65	-369	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_32	14.4078090262711	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAGTATCAAGTATTT	NA	False	NA	-8	True	AATAAA	-12	NA	55845468	55457535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845371
ES.35110.13	chr9	-	4844	32	ISM	ENSMUSG00000034007.11	ENSMUST00000217647.2	4370	33	16771	-514	-1734	-370	3prime_fragment	FALSE	canonical	1	1	junction_22	14.5284535494671	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGGAGTATCAAGTATT	NA	False	NA	-9	True	AATAAA	-11	NA	55828623	55457536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771669_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549
ES.35110.15	chr9	-	4577	32	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	0	-373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	17.9892440982329	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGGAGTATCAAGT	NA	False	NA	-12	True	AATAAA	-8	NA	55845394	55457539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714379_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.16	chr9	-	4811	32	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	1	-373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.8882529659198	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGGAGTATCAAGT	NA	False	NA	-12	True	AATAAA	-8	NA	55845393	55457539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765690_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.17	chr9	-	4338	3	ISM	ENSMUSG00000034007.11	ENSMUST00000037408.9	5158	31	359851	373	232556	-373	3prime_fragment	FALSE	canonical	3	73	junction_1	1	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGGAGTATCAAGT	3263	False	NA	-12	True	AATAAA	-8	NA	55467038	55457539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_55458156_55460754_55460807_55463368
ES.35110.18	chr9	-	5019	34	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	3	-375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	20.3362911636319	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAGGGAGTATCAA	NA	False	NA	-14	True	AATAAA	-6	NA	55845400	55457541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55827593_55827764_55828549_55828623_55845371
ES.35110.19	chr9	-	4601	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	7	623	7	254	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACAGTTTTCAGTGTTG	NA	False	NA	NA	False	AATGAA	-2	NA	55845378	55457785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.2	chr9	-	5257	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-33	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_32	14.4078090262711	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATGCCAAGCACTGC	NA	False	NA	NA	False	AATAAA	-12	NA	55845436	55457169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845371
ES.35110.21	chr9	-	4476	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	1	754	1	123	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTAGCTTTGCAAAT	NA	False	NA	NA	False	TATAAA	-15	NA	55845384	55457916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.22	chr9	-	4412	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	2	123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.7562222045482	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTAGCTTTGCAAAT	NA	False	NA	NA	False	TATAAA	-15	NA	55845383	55457916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493565_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.23	chr9	-	3110	23	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	1	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	15.7275354681154	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTCCCTTTGTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	55845393	55458031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.24	chr9	-	4435	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-73	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_32	14.4078090262711	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGAGTCCCTTTGTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	55845476	55458031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845371
ES.35110.25	chr9	-	4456	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-96	871	-78	6	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGAGTCCCTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	55845481	55458033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.26	chr9	-	8188	8	NNC	ENSMUSG00000034007.11	novel	2911	22	NA	NA	136344	1	intron_retention	FALSE	canonical	0	0	junction_5	30.2695374586263	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTATTTGAGTCCCT	NA	False	NA	NA	False	AATAAA	-13	NA	55563250	55458038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55507822_55507894_55510049_55517359_55563188
ES.35110.29	chr9	-	4164	31	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-1734	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	15.2023755453621	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAATTCTGTATTTGAGT	NA	False	NA	NA	False	AATAAA	-9	NA	55828623	55458042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549
ES.35110.3	chr9	-	4960	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	-97	368	-79	-364	multi-exon	FALSE	canonical	3	40	junction_24	10.0574521500229	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCAAGTATTTTCTTA	NA	False	NA	-3	True	AATAAA	-17	NA	55845482	55457530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.30	chr9	-	4341	33	NNC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	14.6495520409329	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTAATTCTGTATTTGAG	NA	False	NA	NA	False	AATAAA	-8	NA	55845382	55458043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714895_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.31	chr9	-	1310	1	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	238449	-1785	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTAGGCAGGTGTTGC	9156	False	NA	NA	False	NA	NA	NA	55461145	55459835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55459800_55461100
ES.35110.32	chr9	-	5029	1	Intergenic	novelGene_28493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55638643	55633614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_55633600_55638600
ES.35110.33	chr9	-	5400	24	ISM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	2	191242	2	2508	5prime_fragment	FALSE	canonical	3	40	junction_15	10.6330796034146	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGTGTTATTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	55845383	55648404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.4	chr9	-	4651	31	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	3	-365	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	17.6151449989301	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTATCAAGTATTTTCTT	NA	False	NA	-4	True	AATAAA	-16	NA	55845391	55457531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55828549_55828623_55845353
ES.35110.6	chr9	-	4783	32	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	-59	-368	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	14.6004718182426	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGTATCAAGTATTTT	NA	False	NA	-7	True	AATAAA	-13	NA	55845462	55457534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ES.35110.8	chr9	-	4792	32	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	2	-369	combination_of_known_splicesites	FALSE	canonical	2	4	junction_30	14.2637559798044	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAGTATCAAGTATTT	NA	False	NA	-8	True	AATAAA	-12	NA	55845383	55457535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55828549_55828623_55845353
ES.35110.9	chr9	-	5391	1	FSM	ENSMUSG00000064472.3	ENSMUST00000082538.3	91	1	70	-5370	70	5370	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGAGTATCAAGTATTT	7375	False	NA	-8	True	AATAAA	-12	NA	55462926	55457535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_55457500_55462900
ES.35111.1	chr9	+	3017	2	FSM	ENSMUSG00000111662.2	ENSMUST00000214039.2	486	2	27	-2558	27	152	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTGTGTTTCATGGT	NA	False	NA	NA	False	AATACA	-16	NA	55845562	55859845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55845849_55857114
ES.35112.1	chr9	+	1477	2	Intergenic	novelGene_28494	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAAATATTGGTA	NA	False	NA	NA	False	NA	NA	NA	55863283	55869871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55864682_55869792
ES.35112.2	chr9	+	5842	1	Antisense	novelGene_ENSMUSG00000050702.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTGCCACTTCCAGGA	NA	False	NA	NA	False	AATAAA	-44	NA	55864147	55869989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_55864100_55870000
ES.35113.1	chr9	+	177	1	Intergenic	novelGene_28495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAGATGAC	3048	False	NA	NA	False	NA	NA	NA	55941328	55941505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55941300_55941500
ES.35114.1	chr9	+	2070	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	-39	-7	-27	7	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGACATTTTCAATTG	921	False	NA	25	True	ATTAAA	-26	NA	55949101	55966368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ES.35114.10	chr9	+	1533	6	NIC	ENSMUSG00000032320.8	novel	2024	7	NA	NA	73	-193	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	146.538186149549	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATATGTTTGGGTTTTTG	1061	False	NA	2	True	AATAAA	-13	NA	55949241	55966168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949858_55949965_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ES.35114.11	chr9	+	1657	6	NIC	ENSMUSG00000032320.8	novel	2024	7	NA	NA	137	-5	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	146.538186149549	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAACGTGCACCTGAGA	1125	False	NA	13	True	ATTAAA	-14	NA	55949305	55966356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949858_55949965_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ES.35114.12	chr9	+	2341	1	NIC	ENSMUSG00000032320.8	novel	3080	8	NA	NA	14662	-190	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTGGGTTTTTGTTT	NA	False	NA	5	True	AATAAA	-16	NA	55963830	55966171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55963800_55966200
ES.35114.4	chr9	+	1823	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	13	188	0	-188	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGGGTTTTTGTTTTT	973	False	NA	7	True	AATAAA	-18	NA	55949153	55966173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ES.35114.5	chr9	+	3097	8	NIC	ENSMUSG00000032320.8	novel	3080	8	NA	NA	0	38	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	131.645628216707	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTAGCAGGTGTAT	973	False	NA	NA	False	NA	NA	NA	55949153	55969204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342_55966653_55968409
ES.35114.6	chr9	+	5149	6	NIC	ENSMUSG00000032320.8	novel	2024	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	320	junction_4	28.1453370916036	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCACCTGAGACATTT	973	False	NA	18	True	ATTAAA	-19	NA	55949153	55966361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55963540_55964710_55964854_55965342
ES.35114.7	chr9	+	4272	6	NIC	ENSMUSG00000032320.8	novel	2024	7	NA	NA	1	-189	intron_retention	FALSE	canonical	3	320	junction_4	28.4112653713276	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTGGGTTTTTGTTTT	974	False	NA	6	True	AATAAA	-17	NA	55949154	55966172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949858_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ES.35114.8	chr9	+	4754	5	NIC	ENSMUSG00000032320.8	novel	3080	8	NA	NA	5	-189	intron_retention	FALSE	canonical	1	1	junction_1	177.389930661241	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTGGGTTTTTGTTTT	978	False	NA	6	True	AATAAA	-17	NA	55949158	55966172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_55949489_55949862_55949965_55960190_55963540_55964710_55964854_55965342
ES.35115.1	chr9	+	5663	1	Intergenic	novelGene_28496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55975350	55981013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_55975400_55981000
ES.35116.1	chr9	+	1773	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	78	12	64	0	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGCGGCACATTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	55997323	56036160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
ES.35117.1	chr9	-	4254	1	Antisense	novelGene_ENSMUSG00000032322.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56031185	56026931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_56026900_56031200
ES.35118.1	chr9	-	1715	8	NNC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	-22	1645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	267.23168882115	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGTGTGCCTGCTGAC	NA	False	NA	NA	False	NA	NA	NA	56068226	56041522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56042367_56043897_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ES.35118.2	chr9	-	1741	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	-23	-2	-23	2	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACATTTTAATTATTTG	NA	False	NA	-1	True	AATAAA	-19	NA	56068364	56043165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ES.35118.4	chr9	-	1668	7	NNC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	283.774949955457	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGTACATTTTAATTA	NA	False	NA	-5	True	AATAAA	-15	NA	56068311	56043169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068099
ES.35118.5	chr9	-	1641	7	NNC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	284.5598941055	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGTACATTTTAATTA	NA	False	NA	-5	True	AATAAA	-15	NA	56068307	56043169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56044020_56052772_56052857_56053058_56053185_56053809_56053900_56054369_56054445_56054670_56054863_56068083
ES.35118.7	chr9	-	1567	6	NIC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	304.623045746706	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGTACATTTTAATTA	NA	False	NA	-5	True	AATAAA	-15	NA	56068347	56043169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56044020_56052772_56052857_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ES.35118.8	chr9	-	1574	7	NNC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	283.032192907843	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCATGTACATTTTAATT	NA	False	NA	-6	True	AATAAA	-14	NA	56068315	56043170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068196
ES.35118.9	chr9	-	1523	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	29	164	29	-164	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGGTGTGAGTGTGTGCG	NA	False	NA	NA	False	TTTAAA	-3	NA	56068312	56043331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ES.35119.1	chr9	+	6164	3	Antisense	novelGene_ENSMUSG00002075524.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACTTGAACTGAGAGT	1937	False	NA	NA	False	NA	NA	NA	56114078	56153049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_56114896_56134385_56135131_56148447
ES.3512.1	chr10	-	3146	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	27	-348	27	-283	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCAACATGCTCTC	NA	False	NA	NA	False	AATAAA	-14	NA	86541346	86526355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.11	chr10	-	2891	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-2	intron_retention	FALSE	canonical	3	2860	junction_10	353.338536100649	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541324	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.12	chr10	-	4415	14	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	117	-2	intron_retention	FALSE	canonical	3	2860	junction_8	363.671563250634	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541256	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540261_86541170
ES.3512.13	chr10	-	3792	15	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-2	intron_retention	FALSE	canonical	3	2860	junction_8	359.907648301786	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541325	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.15	chr10	-	2718	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	879.525776595264	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541325	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538833_86539323_86539466_86540157_86540261_86541170
ES.3512.17	chr10	-	2653	19	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	80	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	856.552379247797	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541293	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86529860_86529949_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.18	chr10	-	3204	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	19	-2	intron_retention	FALSE	canonical	3	2860	junction_10	350.123460367911	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541354	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.19	chr10	-	5437	13	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-133	-2	intron_retention	FALSE	canonical	3	2860	junction_8	287.980456030536	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541506	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.2	chr10	-	2933	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	-21	-87	-21	87	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCCAAGTA	NA	False	NA	47	True	TTTAAA	-6	NA	86541394	86526616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.20	chr10	-	2821	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	876.22158326292	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541364	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529385_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.21	chr10	-	3711	16	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	12	-2	intron_retention	FALSE	canonical	3	2860	junction_9	347.713956515345	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541361	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.27	chr10	-	6786	10	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-2	intron_retention	FALSE	canonical	3	2860	junction_5	256.101012093005	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541324	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.28	chr10	-	2770	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	881.281027331775	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541330	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540251_86541170
ES.3512.29	chr10	-	2747	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	870.563457517035	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGTGCTTATTTTCAT	NA	False	NA	-42	True	AATAAA	-14	NA	86541322	86526705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526967_86527491_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.33	chr10	-	4492	16	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	42	-5	intron_retention	FALSE	non_canonical	0	0	junction_15	932.223306581279	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCAGTGCTTATTTT	NA	False	NA	-45	True	AATAAA	-11	NA	86541331	86526708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540809_86541096
ES.3512.35	chr10	-	5718	13	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	2860	junction_8	268.53362090352	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCAGTGCTTATTTT	NA	False	NA	-45	True	AATAAA	-11	NA	86541378	86526708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.36	chr10	-	2763	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	870.563457517035	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCAGTGCTTATTTT	NA	False	NA	-45	True	AATAAA	-11	NA	86541323	86526708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527499_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.37	chr10	-	4181	14	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	47	-5	intron_retention	FALSE	canonical	3	2860	junction_7	270.072464525124	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCAGTGCTTATTTT	NA	False	NA	-45	True	AATAAA	-11	NA	86541326	86526708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.38	chr10	-	3244	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	-442	23	-442	-23	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAAGATCCCAA	NA	False	NA	-63	True	NA	NA	NA	86541815	86526726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.41	chr10	-	2741	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	46	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1361.45441516324	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541327	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531696_86531823_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539464_86540157_86540261_86541170
ES.3512.42	chr10	-	1166	7	NNC	ENSMUSG00000020048.14	novel	3222	13	NA	NA	1147	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1372.37200374631	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86530438	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527607_86528059_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213
ES.3512.43	chr10	-	2684	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	39	-24	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	902.84487870287	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541334	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.45	chr10	-	5762	12	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-24	intron_retention	FALSE	canonical	3	2860	junction_7	280.382029817583	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541324	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.46	chr10	-	3968	15	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	42	-24	intron_retention	FALSE	canonical	3	2860	junction_9	363.412293267522	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541331	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540261_86541170
ES.3512.5	chr10	-	2924	19	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-442	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	1130.947095727	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGGGAATTATCTAATA	NA	False	NA	-17	True	AATAAA	-39	NA	86541815	86526680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541397_86541606_86541744
ES.3512.51	chr10	-	5253	14	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	intron_retention	FALSE	canonical	3	2860	junction_9	357.707096468473	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.52	chr10	-	2743	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	at_least_one_novel_splicesite	FALSE	canonical	1	70	junction_7	864.635939548246	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530476_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.53	chr10	-	3282	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	19	-24	intron_retention	FALSE	canonical	3	2860	junction_10	341.129717812741	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541354	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.54	chr10	-	3357	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-24	intron_retention	FALSE	canonical	0	0	junction_11	1159.75215106639	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541324	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86533854_86534060_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.55	chr10	-	5048	13	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	46	-24	intron_retention	FALSE	canonical	3	2860	junction_6	231.248468463397	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541327	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.56	chr10	-	2763	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1128.35136187614	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541325	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86527997_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540153_86540261_86541170
ES.3512.57	chr10	-	1308	8	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	31	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1190.058084674	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541342	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527550_86534439_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.6	chr10	-	3495	17	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-205	0	intron_retention	FALSE	canonical	3	32	junction_16	900.460227380283	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541578	86526703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540261_86541397
ES.3512.60	chr10	-	3268	16	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	intron_retention	FALSE	canonical	3	2860	junction_9	361.487199711906	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.61	chr10	-	2668	17	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	892.361894076613	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528156_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.64	chr10	-	4658	13	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	53	-24	intron_retention	FALSE	canonical	3	2860	junction_6	271.870322437412	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541320	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.65	chr10	-	2690	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-22	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	881.281027331775	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541395	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541303
ES.3512.66	chr10	-	5838	13	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-6	-24	intron_retention	FALSE	canonical	3	2860	junction_8	377.197441298615	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541379	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.7	chr10	-	4352	14	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	-458	0	intron_retention	FALSE	canonical	3	3024	junction_13	325.681424911745	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86539415	86526703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.70	chr10	-	2650	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-24	combination_of_known_splicesites	FALSE	canonical	1	21	junction_16	902.931025881822	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541325	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86541170
ES.3512.71	chr10	-	2880	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	6	-24	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_16	877.64061659834	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541367	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540072_86540261_86541170
ES.3512.72	chr10	-	4691	14	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	42	-24	intron_retention	FALSE	non_canonical	0	0	junction_3	967.961018091317	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541331	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86527613_86528003_86528160_86528249_86530027_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.78	chr10	-	4353	16	ISM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	50	24	50	-24	intron_retention	FALSE	canonical	3	2860	junction_11	347.114940937757	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.79	chr10	-	2685	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	879.525776595264	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541324	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538893_86539393_86539466_86540157_86540261_86541170
ES.3512.8	chr10	-	3890	16	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	0	intron_retention	FALSE	canonical	0	0	junction_7	931.307315313026	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541325	86526703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531428_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540261_86541170
ES.3512.80	chr10	-	2737	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	877.07787094163	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531703_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.81	chr10	-	2737	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1154.08960510395	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526975_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537556_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.82	chr10	-	2625	17	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1144.81423165508	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541325	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526983_86527999_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539464_86540157_86540261_86541170
ES.3512.84	chr10	-	6273	11	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	40	-24	intron_retention	FALSE	canonical	3	2860	junction_6	286.517783043217	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541333	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86530024_86530213_86530484_86531340_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323
ES.3512.85	chr10	-	2619	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	50	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	877.945092118571	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541323	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537805_86538816_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.87	chr10	-	2784	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	6	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1159.73555630309	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541367	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531596_86531689_86531823_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.88	chr10	-	3545	16	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	116	-24	intron_retention	FALSE	canonical	1	43	junction_8	909.546758922633	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541257	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531788_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.89	chr10	-	2746	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	881.37059826607	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541325	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537567_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.9	chr10	-	3869	16	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	48	0	intron_retention	FALSE	canonical	3	2860	junction_10	351.409251759572	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541325	86526703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86540261_86541170
ES.3512.91	chr10	-	2753	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	39	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	874.805556249887	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAAGATCCCA	NA	False	NA	-64	True	NA	NA	NA	86541334	86526727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528151_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.93	chr10	-	2740	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	51	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	841.395553535108	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTATAAAAATAAAAAAAGAT	NA	False	NA	64	True	NA	NA	NA	86541322	86526731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527607_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.95	chr10	-	2644	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	49	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	875.903235242713	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTAACTGACTATTGG	NA	False	NA	26	True	NA	NA	NA	86541324	86526769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532662_86534210_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.3512.96	chr10	-	2565	19	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	51	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	856.552379247797	2099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCTCCTGAATGTAAAT	NA	False	NA	2	True	NA	NA	NA	86541322	86526793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530303_86530421_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ES.35120.1	chr9	-	11041	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	-4008	-37	5	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAGTGCATGTCCTTCC	NA	False	NA	NA	False	AATAAA	-29	NA	56325388	56108404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ES.35120.10	chr9	-	7141	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-144	-1	-144	1	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTGAGAACTGCAGAAG	NA	False	NA	-7	True	NA	NA	NA	56325495	56112411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ES.35120.11	chr9	-	7000	6	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	16.1542564050469	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	False	NA	-8	True	NA	NA	NA	56325419	56112412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56325224
ES.35120.12	chr9	-	3791	6	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.0926884953772	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	False	NA	-8	True	NA	NA	NA	56325382	56112412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56114896_56134385_56135129_56148443_56148629_56225946_56226105_56281659_56281724_56325224
ES.35120.13	chr9	-	6907	7	NNC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	15.6035964515307	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	False	NA	-8	True	NA	NA	NA	56325474	56112412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325436
ES.35120.14	chr9	-	7114	7	NNC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	13.5205604749047	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	False	NA	-8	True	NA	NA	NA	56325389	56112412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325144
ES.35120.15	chr9	-	6118	3	ISM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	7	4010	7	-7	intron_retention	FALSE	canonical	3	41	junction_2	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCATGAGTGAGAAC	9752	False	NA	-15	True	NA	NA	NA	56151342	56112419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_56114896_56134385_56135129_56148443
ES.35120.16	chr9	-	6114	1	Intergenic	novelGene_28497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAAACCTTTACTGTTA	NA	False	NA	NA	False	NA	NA	NA	56125529	56119415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56119400_56125500
ES.35120.17	chr9	-	5600	3	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-35	5074	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	14	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTAGTTTGTTTGTTTGTC	NA	False	NA	NA	False	AAAACA	-23	NA	56325386	56162766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56168047_56225946_56226105_56325224
ES.35120.18	chr9	-	6356	1	Intergenic	novelGene_28498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATATGAAAAGCTTCC	NA	False	NA	NA	False	NA	NA	NA	56268697	56262341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56262300_56268700
ES.35120.19	chr9	-	1421	1	FSM	ENSMUSG00000074305.10	ENSMUST00000185775.2	1352	1	-54	-15	-37	15	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGAAAGCCCAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	56325388	56323967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56324000_56325400
ES.35120.2	chr9	-	10964	6	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	16.1542564050469	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTTGAAGTGCATGTC	NA	False	NA	NA	False	AATAAA	-24	NA	56325380	56108409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56325224
ES.35120.3	chr9	-	10934	7	NNC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-152	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	15.6035964515307	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGACTTGAAGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	56325503	56108414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325436
ES.35120.4	chr9	-	11172	8	NNC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.7529589501965	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCAGACTTGAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	56325385	56108415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56255771_56255917_56281659_56281724_56325224
ES.35120.5	chr9	-	10605	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-6	-3603	-6	-400	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAAGTTGTTCCTTCCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	56325357	56108809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ES.35120.6	chr9	-	1258	1	ISM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	39164	2518	39164	1485	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTTCTGTTGAGAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	56112185	56110927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_56110900_56112200
ES.35120.7	chr9	-	7169	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	-37	-136	-37	136	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTTGAAATCCCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	56325388	56112276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ES.35120.8	chr9	-	7114	7	NNC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-215	115	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	15.6035964515307	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTCTCTGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	56325566	56112297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325436
ES.35120.9	chr9	-	6854	6	NIC	ENSMUSG00000074305.10	novel	6996	7	NA	NA	-6	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	17.3366663462155	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCAGAAGCCTTTCTGT	NA	False	NA	2	True	NA	NA	NA	56325357	56112402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56281659_56281724_56325224
ES.35121.1	chr9	+	3799	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	67.6052448838289	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGACCAGTTTTGCTTGC	NA	False	NA	14	True	ATTAAA	-20	NA	56325881	56404223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
ES.35121.10	chr9	+	8248	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	67.6052448838289	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56325954	56404220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56400564_56400599
ES.35121.12	chr9	+	3631	11	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	1	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	93.7744634748715	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTGATGTGCTTGCC	NA	False	NA	16	True	ATTAAA	-17	NA	56326104	56404165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56361640_56361754_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
ES.35121.14	chr9	+	3371	11	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	83.9275878361817	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGTGACCAGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	56326111	56404217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809_56403065_56403256
ES.35121.15	chr9	+	3547	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.16407915984	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGTGACCAGTTTTG	NA	False	NA	9	True	ATTAAA	-15	NA	56326113	56404218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326214_56374647_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.16	chr9	+	1317	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	186	197	0	-153	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGACTTGAGGTGGT	NA	False	NA	NA	False	NA	NA	NA	56326113	56397412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ES.35121.17	chr9	+	3514	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	0	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	87.9343189229577	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGTTGATGTGCTTGC	NA	False	NA	15	True	ATTAAA	-16	NA	56326113	56404164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396120_56397105_56397249_56401809
ES.35121.19	chr9	+	3546	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.16407915984	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGTGACCAGTTTTG	NA	False	NA	9	True	ATTAAA	-15	NA	56326114	56404218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326208_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.2	chr9	+	3634	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.6052448838289	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGTGACCAGTTTTG	NA	False	NA	9	True	ATTAAA	-15	NA	56325893	56404218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401957
ES.35121.20	chr9	+	3707	11	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	1	-52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.2405320018546	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTGCTTGCCTGA	NA	False	NA	19	True	ATTAAA	-20	NA	56326114	56404168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56386179_56386376_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
ES.35121.21	chr9	+	2563	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	191	-1054	5	1054	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGAACACTTGCTGTTC	NA	False	NA	NA	False	ACTAAA	-25	NA	56326118	56398663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ES.35121.22	chr9	+	3590	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	5	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.16407915984	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTGCTTGCCTGA	NA	False	NA	19	True	ATTAAA	-20	NA	56326118	56404168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326306_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.23	chr9	+	6855	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	192	-5347	6	-1264	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGGTTGGTTCTCGGTTT	NA	False	NA	NA	False	AAAACA	-21	NA	56326119	56402956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ES.35121.25	chr9	+	1030	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	-30	-12	-30	12	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATGGTAAACAAGAAAAT	NA	False	NA	NA	False	AATAAA	-45	NA	56344710	56345740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56344700_56345700
ES.35121.26	chr9	+	183	1	Intergenic	novelGene_28500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56358583	56358766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56358600_56358800
ES.35121.27	chr9	+	3464	9	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	48524	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.0748483765752	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGTGACCAGTTTTG	NA	False	NA	9	True	ATTAAA	-15	NA	56374637	56404218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
ES.35121.28	chr9	+	3311	8	ISM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	55921	52	55700	-52	3prime_fragment	FALSE	canonical	3	83	junction_7	38.2355748442922	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTGCTTGCCTGA	NA	False	NA	19	True	ATTAAA	-20	NA	56381813	56404168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.29	chr9	+	6318	1	Genic_Genomic	ENSMUSG00000032329.5	novel	NA	NA	NA	NA	71793	4	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCAGTTTTGCTTGCA	NA	False	NA	15	True	ATTAAA	-21	NA	56397906	56404224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_56397900_56404200
ES.35121.3	chr9	+	3720	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	12	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	74.047699008106	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGATGTGCTTGCCTGA	NA	False	NA	19	True	ATTAAA	-20	NA	56325904	56404168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384685_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.4	chr9	+	3512	11	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	-17	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	70.4841116848329	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGTTGATGTGCTTGC	NA	False	NA	15	True	ATTAAA	-16	NA	56325910	56404164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816_56403065_56403256
ES.35121.5	chr9	+	3759	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	19	0	-16	0	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56325911	56404220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ES.35121.6	chr9	+	3675	10	NNC	ENSMUSG00000032329.5	novel	3778	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	87.4719002499279	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATGTGACCAGTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	56325911	56404217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56326216_56374641_56374735_56381814_56381960_56384553_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401809
ES.35121.7	chr9	+	2183	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	-12	-471	-12	471	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTAGATGGCTCTTGA	NA	False	NA	NA	False	NA	NA	NA	56325915	56398080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ES.35121.8	chr9	+	2098	8	FSM	ENSMUSG00000032329.5	ENSMUST00000217518.2	2468	8	-192	562	-12	-562	multi-exon	FALSE	canonical	3	179	junction_3	24.8160580006954	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTAGTGTCATGATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	56325915	56397003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897
ES.35122.1	chr9	-	174	1	Intergenic	novelGene_28499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGGTAGTAGGGT	NA	False	NA	NA	False	NA	NA	NA	56347994	56347820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56347800_56348000
ES.35123.1	chr9	-	5434	1	Intergenic	novelGene_28501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTCTCAGGTGGAACAG	1004	False	NA	NA	False	NA	NA	NA	56381120	56375686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56375700_56381100
ES.35124.1	chr9	+	283	1	Intergenic	novelGene_28502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTTTTCCCTGTCCA	188	False	NA	NA	False	NA	NA	NA	56419675	56419958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56419700_56420000
ES.35125.1	chr9	-	154	1	Intergenic	novelGene_28503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	56422247	56422093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56422100_56422200
ES.35126.1	chr9	-	2801	2	Intergenic	novelGene_28504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAAATTAAATT	NA	False	NA	NA	False	NA	NA	NA	56442206	56432970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56435708_56442142
ES.35127.1	chr9	+	3556	3	NNC	ENSMUSG00000097870.3	novel	2655	3	NA	NA	0	919	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCTACCTTTGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	56513976	56522676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56514031_56516243_56516370_56519300
ES.35127.2	chr9	+	582	5	NNC	ENSMUSG00000097870.3	novel	2655	3	NA	NA	18	4694	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.78535710713571	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTTACAGAGGAAGTTT	NA	False	NA	NA	False	CATAAA	-21	NA	56513994	56526451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56514031_56516243_56516370_56519300_56519506_56524511_56524549_56526273
ES.35127.3	chr9	+	4437	2	ISM	ENSMUSG00000097870.3	ENSMUST00000181927.3	2655	3	1326	-913	1326	913	3prime_fragment	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACCCCCTACCTTTG	NA	False	NA	NA	False	NA	NA	NA	56515302	56522670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56516370_56519300
ES.35128.1	chr9	-	3457	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-60	-615	-60	2	multi-exon	TRUE	canonical	3	12	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGACTGCTCTCATT	6163	False	NA	-14	True	NA	NA	NA	56542972	56525756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56528600_56542358
ES.35128.2	chr9	-	3338	8	NNC	ENSMUSG00000049556.6	novel	3627	7	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.49829835452879	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTCGGAATGCAAACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	56703589	56526384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56528600_56552597_56552768_56560883_56561117_56581706_56581794_56592403_56592566_56631584_56631630_56682822_56682933_56703273
ES.35128.3	chr9	-	3778	7	FSM	ENSMUSG00000049556.6	ENSMUST00000210032.2	3627	7	-778	627	-448	3	multi-exon	FALSE	canonical	0	0	junction_2	1.34370962471642	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGTCGGAATGCAAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	56704200	56526385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56528600_56560883_56561117_56581706_56581794_56592403_56592566_56631584_56631630_56682822_56682933_56703273
ES.35128.4	chr9	-	3003	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	-236	15	-236	2	multi-exon	FALSE	canonical	3	12	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGTCGGAATGCAAACT	5987	False	NA	NA	False	AATAAA	-22	NA	56543148	56526386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56528600_56542358
ES.35128.5	chr9	-	214	1	Intergenic	novelGene_28505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	56649938	56649724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56649700_56649900
ES.35129.1	chr9	-	312	1	Intergenic	novelGene_28506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAGAGAGAACTA	NA	False	NA	NA	False	NA	NA	NA	56741936	56741624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56741600_56741900
ES.3513.1	chr10	-	475	1	FSM	ENSMUSG00000056366.6	ENSMUST00000070435.6	402	1	201	-274	201	274	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATTGTTCACCACAAA	NA	False	NA	NA	False	NA	NA	NA	86568051	86567576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_86567600_86568100
ES.35130.1	chr9	+	8179	10	FSM	ENSMUSG00000032911.7	ENSMUST00000035661.7	8121	10	-10	-48	-10	48	multi-exon	FALSE	canonical	0	0	junction_7	0.831479419283098	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCCTCCTTTCATTGT	NA	False	NA	NA	False	NA	NA	NA	56772306	56807202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56772562_56790840_56791005_56792518_56796071_56797341_56797825_56798273_56798451_56799598_56799798_56799900_56800036_56800138_56800306_56803875_56804060_56804339
ES.35131.1	chr9	+	180	1	Intergenic	novelGene_28507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56810276	56810456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56810300_56810500
ES.35132.1	chr9	+	178	1	Intergenic	novelGene_28508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	56828227	56828405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56828200_56828400
ES.35133.1	chr9	-	4582	2	FSM	ENSMUSG00000032733.7	ENSMUST00000050916.7	4571	2	-11	0	-11	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGCACAGCTTCTTCTT	NA	False	NA	NA	False	GATAAA	-24	NA	56835666	56824476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56825989_56832596
ES.35134.1	chr9	+	160	1	Intergenic	novelGene_28509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACACAACACTG	NA	False	NA	NA	False	NA	NA	NA	56844357	56844517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56844400_56844500
ES.35135.1	chr9	-	5959	1	FSM	ENSMUSG00000110930.2	ENSMUST00000216414.2	838	1	-4072	-1049	-4072	1049	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTGGCCTAGTGTG	7410	False	NA	NA	False	NA	NA	NA	56844624	56838665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56838700_56844600
ES.35136.1	chr9	+	960	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	-37	1	-37	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTTGTCTGGTCGTTC	NA	False	NA	17	True	AATAAA	-26	NA	56844721	56845681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56844700_56845700
ES.35136.2	chr9	+	1306	2	Genic_Genomic	ENSMUSG00000032288.10	novel	924	1	NA	NA	22	4557	multi-exon	FALSE	canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTCATGGTATTTCAT	NA	False	NA	NA	False	NA	NA	NA	56844780	56850239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_56845378_56849530
ES.35137.1	chr9	+	3790	1	Intergenic	novelGene_28510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAATAATAATAATCCG	NA	False	NA	NA	False	NA	NA	NA	56853035	56856825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56853000_56856800
ES.35137.2	chr9	+	178	1	Intergenic	novelGene_28511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTCTCC	NA	False	NA	NA	False	NA	NA	NA	56855489	56855667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56855500_56855700
ES.35138.1	chr9	+	1428	9	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	-36	-5	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_2	66.806506980982	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTTGCTTGTGGTTA	NA	False	NA	3	True	AATATA	-14	NA	56858125	56890485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.10	chr9	+	2667	8	NIC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	43	1482	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.2945237459036	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAACACT	NA	False	NA	NA	False	NA	NA	NA	56858204	56891972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56858238_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.11	chr9	+	1356	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	46	11938	46	-11938	intron_retention	FALSE	canonical	3	166	junction_1	18.1536650722535	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAGAGAAAAGGGCTTA	NA	False	NA	NA	False	NA	NA	NA	56858207	56878552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537
ES.35138.12	chr9	+	2756	10	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	47	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	88.238873323678	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAAGGTTGCTTGTGGT	NA	False	NA	1	True	AATATA	-12	NA	56858208	56890483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56859484_56863027_56863201_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.13	chr9	+	4325	5	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	49	8735	49	-8735	5prime_fragment	FALSE	canonical	3	166	junction_1	18.0190871022924	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGAGTGGTAGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	56858210	56881755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873
ES.35138.14	chr9	+	1415	10	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	50	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.238873323678	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTTGCTTGTGGTTA	NA	False	NA	3	True	AATATA	-14	NA	56858211	56890485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56863121_56863201_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.15	chr9	+	4295	5	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	50	-8770	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	80.701610888507	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858211	56881720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56877643_56877873
ES.35138.16	chr9	+	2719	8	NIC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	53	1478	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	67.5401618993303	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	56858214	56891968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.17	chr9	+	6098	7	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	56	0	intron_retention	FALSE	canonical	3	12	junction_2	68.9508681759862	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858217	56890490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.18	chr9	+	2655	1	Genic_Genomic	ENSMUSG00000055334.5	novel	NA	NA	NA	NA	31117	1443	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3980	False	NA	NA	False	NA	NA	NA	56889278	56891933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_56889300_56891900
ES.35138.19	chr9	+	2912	1	Intergenic	novelGene_28514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATATTTTTTTAAGCC	6938	False	NA	NA	False	AATAAA	-14	NA	56892236	56895148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56892200_56895100
ES.35138.2	chr9	+	4476	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	-30	-3055	-30	3055	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCACTGGTTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	56858131	56893545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.3	chr9	+	2879	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	-1	-1487	-1	1487	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAACACTTGGAG	NA	False	NA	NA	False	NA	NA	NA	56858160	56891977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.4	chr9	+	6116	7	NIC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	29	-3	intron_retention	FALSE	canonical	3	166	junction_1	13.8533991015442	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCTTGTGGTTATT	NA	False	NA	5	True	AATATA	-16	NA	56858190	56890487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.5	chr9	+	1356	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	32	3	32	-3	multi-exon	FALSE	canonical	3	166	junction_1	20.9105236663265	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCTTGTGGTTATT	NA	False	NA	5	True	AATATA	-16	NA	56858193	56890487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35138.6	chr9	+	4573	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	32	8735	32	-8735	intron_retention	FALSE	canonical	3	166	junction_1	18.1536650722535	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGAGTGGTAGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	56858193	56881755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537
ES.35138.7	chr9	+	4113	8	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	32	0	intron_retention	FALSE	canonical	3	12	junction_2	71.0426718563554	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858193	56890490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56888210_56889945
ES.35138.8	chr9	+	4545	4	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	32	-8769	intron_retention	FALSE	canonical	3	12	junction_2	83.015393485519	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56858193	56881721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537
ES.35138.9	chr9	+	2639	7	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	41	1485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.1413006988715	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAAACACTTGG	NA	False	NA	NA	False	NA	NA	NA	56858202	56891975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ES.35139.1	chr9	-	200	1	Intergenic	novelGene_28512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1006	False	NA	NA	False	NA	NA	NA	56859485	56859285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56859300_56859500
ES.3514.1	chr10	-	1587	3	Antisense	novelGene_ENSMUSG00000112743.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATAACTGAGTAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	86602123	86597779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_86599061_86601375_86601548_86601989
ES.35140.1	chr9	-	147	1	Intergenic	novelGene_28513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56863832	56863685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56863700_56863800
ES.35141.1	chr9	-	2498	1	Intergenic	novelGene_28515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	56901593	56899095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56899100_56901600
ES.35142.1	chr9	+	4224	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	-104	-19	-104	19	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACAGTCTGGGGTCGGG	NA	False	NA	NA	False	ATTAAA	-19	NA	56902102	56970110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.100	chr9	+	6068	18	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	7854	-1619	-813	1619	3prime_fragment	FALSE	canonical	3	239	junction_7	36.4221689972422	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGACAAGTTATTTTAA	4190	False	NA	NA	False	AATAAA	-19	NA	57001718	57037269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.101	chr9	+	4337	17	ISM	ENSMUSG00000042557.15	ENSMUST00000168502.8	4899	21	14139	14	49	-12	3prime_fragment	FALSE	canonical	3	20	junction_14	80.3188956597387	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAATAAGTAACATA	5052	False	NA	NA	False	AATAAA	-10	NA	57002580	57035636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.102	chr9	+	4054	16	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	10139	5	1472	-3	3prime_fragment	FALSE	canonical	3	239	junction_5	37.2677996249965	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	6475	False	NA	NA	False	AATAAA	-19	NA	57004003	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.103	chr9	+	3604	15	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2858	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	90.7621920746964	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	7861	False	NA	NA	False	AATAAA	-16	NA	57005389	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034707_57034746
ES.35142.104	chr9	+	3420	13	NNC	ENSMUSG00000042557.15	novel	5086	21	NA	NA	5939	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	122.160726322151	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	57008470	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032460_57032661_57034431
ES.35142.105	chr9	+	5168	12	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	15060	465	6393	-463	3prime_fragment	FALSE	canonical	3	239	junction_1	40.3019594298379	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTTGAAGTTCACCTT	NA	False	NA	8	True	NA	NA	NA	57008924	57035185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.106	chr9	+	3597	7	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-4701	2	intron_retention	FALSE	canonical	3	307	junction_1	25.77951383043	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGTCCCTTGTCCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	57016043	57035652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57026472_57032452_57032661_57034431
ES.35142.107	chr9	+	3844	7	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	22679	8	-4201	-6	3prime_fragment	FALSE	canonical	3	329	junction_4	20.317616876877	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	57016543	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.108	chr9	+	6059	28	Fusion	ENSMUSG00000042557.15_ENSMUSG00000032295.16	novel	4961	22	NA	NA	-2839	3	intron_retention	FALSE	canonical	0	0	junction_7	110.147762085552	826	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57017905	57049494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034609_57037407_57037433_57038815_57038940_57040805_57040877_57041416_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044765_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57049200_57049278
ES.35142.109	chr9	+	2010	7	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-2373	-6	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	130.699400661722	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	57018371	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57018437_57020829_57021000_57024671_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.11	chr9	+	3610	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	166	325	-7	-325	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAACTTGTTCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	56902372	56969766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.110	chr9	+	4611	5	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	27508	471	628	-469	3prime_fragment	FALSE	canonical	3	329	junction_2	22.5319217999708	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGAGTCCTTGAAGTT	NA	False	NA	2	True	NA	NA	NA	57021372	57035179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.111	chr9	+	2618	1	Antisense	novelGene_ENSMUSG00000086728.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTAAGCTGCCTGC	NA	False	NA	NA	False	NA	NA	NA	57021977	57024595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57022000_57024600
ES.35142.112	chr9	+	4366	4	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2269	-3	intron_retention	FALSE	canonical	3	349	junction_2	15.5848929700813	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	57023013	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57024840_57025353_57026472_57032452_57032661_57034431
ES.35142.113	chr9	+	524	3	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	11706	1894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	189	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCCTTTTCTGTATTT	NA	False	NA	NA	False	NA	NA	NA	57032450	57037544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57032661_57034431_57034609_57037407
ES.35142.114	chr9	+	3312	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	-1	509	-1	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57037972	57049497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.115	chr9	+	3205	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.8533221930442	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038029	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038129_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.116	chr9	+	3230	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	69.0967321948007	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038032	57049497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044085_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.118	chr9	+	1591	12	ISM	ENSMUSG00000032295.16	ENSMUST00000034836.16	3215	26	-17	4040	-15	326	5prime_fragment	FALSE	canonical	3	191	junction_2	19.8119256180265	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACCTTGTATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	57038036	57045447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203
ES.35142.119	chr9	+	6944	18	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-15	1	intron_retention	FALSE	canonical	3	188	junction_12	34.5257538898269	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATAATGGTGCCTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	57038036	57049489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57049200_57049278
ES.35142.12	chr9	+	3627	15	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	524	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.6453031355766	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAAACCCTTTTAGTTT	NA	False	NA	NA	False	TATAAA	-11	NA	56902903	56970084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56902941_56903765_56903916_56922171_56922252_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.120	chr9	+	5135	23	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-15	1	intron_retention	FALSE	canonical	2	191	junction_2	30.257435395192	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038036	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.121	chr9	+	3499	25	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_15	56.9747598844338	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038036	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046968_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.122	chr9	+	3281	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	68.0735367084743	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038036	57049497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045025_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048354_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.123	chr9	+	5075	24	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-14	0	intron_retention	FALSE	canonical	2	160	junction_15	33.9752495257984	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038037	57049497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.124	chr9	+	3333	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	160	junction_17	34.2922235677744	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038037	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57049200_57049278
ES.35142.125	chr9	+	3364	27	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-11	3	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	65.9648911460129	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57038040	57049494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043486_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.126	chr9	+	5003	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_20	96.5229925496368	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038040	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046352_57046439_57046529_57046686_57046894_57047388_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048499_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.127	chr9	+	4881	22	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-11	1	intron_retention	TRUE	canonical	2	3	junction_3	74.0665570637886	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATAATGGTGCCTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	57038040	57049489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038940_57040805_57040877_57041416_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045705_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57049200_57049278
ES.35142.129	chr9	+	5222	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	10	junction_5	55.169624794809	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038042	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043486_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.13	chr9	+	154	1	Intergenic	novelGene_28518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	56935370	56935524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56935400_56935500
ES.35142.132	chr9	+	3741	25	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	70.2403487834608	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGCCTTGCTGTTTCT	NA	False	NA	21	True	AATAAA	-22	NA	57038051	57049495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57039404_57039545_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.133	chr9	+	2996	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0910630796424	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038051	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046352_57046439_57046529_57046686_57046894_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.134	chr9	+	4542	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	55.3131304483845	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038051	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041057_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.136	chr9	+	3227	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	53.3250560243494	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038051	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048504_57048597_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.137	chr9	+	3183	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	54.9959998545349	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038051	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047778_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.138	chr9	+	3656	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	1	intron_retention	TRUE	canonical	1	1	junction_6	55.7533998963292	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038051	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043548_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.139	chr9	+	3174	26	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	55.5892075856456	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038051	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042782_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.14	chr9	+	2927	9	NNC	ENSMUSG00000032290.8	novel	886	2	NA	NA	7391	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6930639376292	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTATAGTGGTACAATT	NA	False	NA	NA	False	AGTAAA	-23	NA	56936906	56970037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56936986_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.140	chr9	+	3481	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	-2	intron_retention	FALSE	canonical	2	160	junction_16	33.5989417822777	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGCCTTGCTGTTTCT	NA	False	NA	21	True	AATAAA	-22	NA	57038051	57049495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.142	chr9	+	4947	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	-1	intron_retention	FALSE	canonical	2	3	junction_15	56.0647748520053	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038052	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.143	chr9	+	3313	20	NNC	ENSMUSG00000032295.16	novel	3215	26	NA	NA	1	0	intron_retention	TRUE	canonical	0	0	junction_2	107.510123210783	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTATAATGGTGCCTTG	NA	False	NA	13	True	AATAAA	-14	NA	57038052	57049487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038543_57039404_57039545_57040805_57040877_57042373_57042552_57044241_57044353_57044565_57044870_57045028_57045805_57046352_57046439_57046529_57046686_57046881_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.144	chr9	+	4945	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_21	56.3412838392087	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038052	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048732_57048847_57048997_57049089_57049200_57049278
ES.35142.145	chr9	+	4947	27	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	85.8017530613586	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATAATGGTGCCTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	57038052	57049489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57039404_57039545_57040805_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.146	chr9	+	5064	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	3	intron_retention	FALSE	canonical	1	2	junction_2	57.2536227298324	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57038052	57049494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038940_57040805_57040877_57041057_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.148	chr9	+	5250	24	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	4	junction_15	81.0971785141071	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038940_57040805_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046881_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.149	chr9	+	5521	21	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	188	junction_14	31.7759342899623	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.15	chr9	+	173	1	Intergenic	novelGene_28519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGCTGAATTTTTGTA	1923	False	NA	NA	False	NA	NA	NA	56939749	56939922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56939700_56939900
ES.35142.150	chr9	+	5092	23	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	-1	intron_retention	FALSE	canonical	2	9	junction_11	55.6558380949347	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038052	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045705_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.151	chr9	+	5481	22	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	-1	intron_retention	FALSE	canonical	2	160	junction_14	34.3126878022939	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038052	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.152	chr9	+	3189	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	55.5400252070523	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038052	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038478_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.153	chr9	+	4555	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	68.9684681575573	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTATAATGGTGCCTTGC	NA	False	NA	14	True	AATAAA	-15	NA	57038052	57049488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041057_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.154	chr9	+	3438	25	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_15	70.6998742730298	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038052	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046968_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.155	chr9	+	3474	23	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	3	junction_13	57.5031440031581	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.156	chr9	+	3102	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	56.399477317318	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.157	chr9	+	4901	24	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	160	junction_16	34.1027580943365	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038052	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.158	chr9	+	3128	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	55.7276206950677	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038053	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.159	chr9	+	4723	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	1	intron_retention	FALSE	canonical	2	160	junction_16	33.5989417822777	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038053	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.16	chr9	+	137	1	Intergenic	novelGene_28520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAAAC	4642	False	NA	NA	False	NA	NA	NA	56942468	56942605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_56942500_56942600
ES.35142.160	chr9	+	3077	25	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.2404600086177	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTGCCTTGCTGTTT	NA	False	NA	19	True	AATAAA	-20	NA	57038054	57049493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045705_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.161	chr9	+	4709	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_17	79.7992163530166	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTATAATGGTGCCTTGC	NA	False	NA	14	True	AATAAA	-15	NA	57038054	57049488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.162	chr9	+	3355	27	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.1145993005413	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038054	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041057_57041172_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.163	chr9	+	5070	23	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	2	intron_retention	FALSE	canonical	2	10	junction_2	55.6971778444358	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTGCCTTGCTGTTT	NA	False	NA	19	True	AATAAA	-20	NA	57038054	57049493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.164	chr9	+	3305	25	ISM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	81	513	1	2	intron_retention	FALSE	canonical	2	160	junction_17	32.5018963121983	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTGCCTTGCTGTTT	NA	False	NA	19	True	AATAAA	-20	NA	57038054	57049493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089
ES.35142.165	chr9	+	6025	21	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	-1	intron_retention	FALSE	canonical	2	3	junction_11	59.9168382009598	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038055	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.166	chr9	+	3172	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	68.0793654494517	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTATAATGGTGCCTTGC	NA	False	NA	14	True	AATAAA	-15	NA	57038055	57049488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045705_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.168	chr9	+	3340	27	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.2603756094522	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038055	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038543_57038815_57038940_57039404_57039545_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.169	chr9	+	3145	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_23	54.5223036930759	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTATAATGGTGCCTTGC	NA	False	NA	14	True	AATAAA	-15	NA	57038055	57049488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048922_57048997_57049089_57049200_57049278
ES.35142.17	chr9	+	4042	2	FSM	ENSMUSG00000032290.8	ENSMUST00000215707.2	886	2	-1541	-1615	-1541	14	multi-exon	FALSE	canonical	3	44	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATTTGACAGTCTGGGG	8280	False	NA	NA	False	ATTAAA	-14	NA	56965180	56970105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56967346_56968228
ES.35142.170	chr9	+	4184	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	70.0021256820105	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTGCCTTGCTGTTTC	NA	False	NA	20	True	AATAAA	-21	NA	57038055	57049494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57041416_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048998_57049089_57049200_57049278
ES.35142.171	chr9	+	4594	24	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-3	1	intron_retention	FALSE	canonical	2	3	junction_12	57.3189596730106	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATAATGGTGCCTTGCT	NA	False	NA	15	True	AATAAA	-16	NA	57038057	57049489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.172	chr9	+	5148	23	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-3	2	intron_retention	FALSE	canonical	2	160	junction_15	33.9212749253619	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTGCCTTGCTGTTT	NA	False	NA	19	True	AATAAA	-20	NA	57038057	57049493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.173	chr9	+	4947	23	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-3	1	intron_retention	FALSE	canonical	2	3	junction_3	82.6678232945834	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038057	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038174_57038442_57038940_57040805_57040877_57041416_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57049200_57049278
ES.35142.175	chr9	+	5055	22	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	1	1	intron_retention	FALSE	canonical	2	3	junction_2	58.1329697922852	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57038070	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57038940_57040805_57040877_57041416_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.176	chr9	+	2918	13	NNC	ENSMUSG00000032295.16	novel	2909	24	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	77.0859909451776	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038072	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57042194_57047133_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.177	chr9	+	3308	25	ISM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	265	516	169	-1	3prime_fragment	FALSE	canonical	2	160	junction_16	34.1528173150555	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038238	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.178	chr9	+	4994	23	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	217	-1	intron_retention	FALSE	canonical	1	2	junction_6	58.5357134753316	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57038286	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038940_57040805_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044765_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.179	chr9	+	3220	26	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-214	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	76.4826777773896	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	57038443	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048354_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.18	chr9	+	5010	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-28	5	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCCTTGTCCTCTCCAA	NA	False	NA	NA	False	AATAAA	-29	NA	56979295	57035655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.180	chr9	+	5507	18	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-877	-2	intron_retention	FALSE	canonical	2	160	junction_9	37.245003845062	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGCCTTGCTGTTTCT	NA	False	NA	21	True	AATAAA	-22	NA	57041349	57049495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57042552_57042728_57044084_57044241_57044353_57044565_57044870_57045028_57045125_57045203_57045805_57046131_57046254_57046352_57046439_57046529_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.181	chr9	+	4806	12	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	-87	-1	intron_retention	FALSE	canonical	3	194	junction_5	32.693669617494	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57042139	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57045125_57045203_57046439_57046529_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847
ES.35142.182	chr9	+	2876	22	NNC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	74.6869505976055	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57042274	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046881_57046993_57047175_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.183	chr9	+	2610	21	ISM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	4753	516	-149	-1	3prime_fragment	FALSE	canonical	2	160	junction_12	34.8304464513448	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57042726	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.184	chr9	+	2172	18	NNC	ENSMUSG00000032295.16	novel	2909	24	NA	NA	561	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	81.3099499352786	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGCCTTGCTGTTTCT	NA	False	NA	21	True	AATAAA	-22	NA	57044589	57049495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045705_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047137_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.185	chr9	+	3829	7	NIC	ENSMUSG00000032295.16	novel	2909	24	NA	NA	-496	0	intron_retention	FALSE	canonical	3	220	junction_1	30.3063066410644	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTATAATGGTGCCTTGC	NA	False	NA	14	True	AATAAA	-15	NA	57044830	57049488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57044870_57045028_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57049200_57049278
ES.35142.186	chr9	+	2172	12	NIC	ENSMUSG00000032295.16	novel	2909	24	NA	NA	-80	2	intron_retention	FALSE	canonical	2	188	junction_4	36.1998584536751	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTGCCTTGCTGTTT	NA	False	NA	19	True	AATAAA	-20	NA	57045629	57049493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.187	chr9	+	1721	6	NIC	ENSMUSG00000032295.16	novel	1067	7	NA	NA	-76	-1	intron_retention	FALSE	canonical	2	212	junction_4	32.5121515744498	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATAATGGTGCCTTGCTG	NA	False	NA	16	True	AATAAA	-17	NA	57047084	57049490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.188	chr9	+	1563	7	NIC	ENSMUSG00000032295.16	novel	1378	10	NA	NA	6	1	intron_retention	FALSE	canonical	2	212	junction_5	32.4794807019242	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	57047166	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048997_57049089_57049200_57049278
ES.35142.19	chr9	+	4791	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-27	-211	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979296	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.2	chr9	+	4300	14	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	-66	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.9695357472639	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAACCCTTTTAGTTTCA	NA	False	NA	NA	False	TATAAA	-13	NA	56902140	56970086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56902941_56910546_56910685_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.20	chr9	+	4682	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-26	-211	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979297	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.21	chr9	+	4897	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-26	2	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGTCCCTTGTCCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	56979297	57035652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.23	chr9	+	4425	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-19	-461	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGAAGTTCACCTTCT	NA	False	NA	10	True	NA	NA	NA	56979304	57035187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.24	chr9	+	5060	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-19	172	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCCTGACAAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	56979304	57035822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.26	chr9	+	9392	45	Fusion	ENSMUSG00000042557.15_ENSMUSG00000032295.16	novel	3820	26	NA	NA	-11	1	intron_retention	FALSE	canonical	0	0	junction_21	96.1770357764461	826	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGTGCCTTGCTGTT	NA	False	NA	18	True	AATAAA	-19	NA	56979312	57049492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034609_57037407_57038566_57038815_57038940_57040805_57040877_57041416_57042552_57042728_57042919_57043523_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.28	chr9	+	4522	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-10	-463	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTTGAAGTTCACCTT	NA	False	NA	8	True	NA	NA	NA	56979313	57035185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.3	chr9	+	4054	13	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.4460202131937	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTAGTTTCATCAATT	NA	False	NA	NA	False	ATTAAA	-1	NA	56902196	56970092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56965181_56965275_56967137_56967346_56968228
ES.35142.30	chr9	+	4668	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-4	-212	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	92.7903416310124	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56979319	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.31	chr9	+	4892	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	96.0469156193992	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56979325	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002552_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.32	chr9	+	6602	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2	1735	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTATTATTTTCTTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	56979325	57037385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.33	chr9	+	5313	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	2	446	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	70.7226979123393	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTGTAGCGTGGGCCT	NA	False	NA	NA	False	AATGAA	-39	NA	56979325	57036096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.34	chr9	+	5148	22	NIC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	3	174	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	80.3294520190322	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGACAAGTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	56979326	57035824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56979348_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.35	chr9	+	4789	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	16	-215	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAACTGCTCTAGCTTC	NA	False	NA	17	True	ATTAAA	-21	NA	56979339	57035433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.36	chr9	+	3986	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	18	-1016	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACGGCACAGTATTCAA	NA	False	NA	NA	False	NA	NA	NA	56979341	57034632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.37	chr9	+	5109	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	83.6327681551738	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56979344	57035650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.38	chr9	+	4995	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56979345	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.39	chr9	+	4999	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	94.3175487382915	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56979347	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.40	chr9	+	4891	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	26	-211	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	83.6327681551738	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979349	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.41	chr9	+	4406	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	31	-224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	95.3123680326955	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGCTAGCATAACTGC	NA	False	NA	8	True	ATTAAA	-12	NA	56979354	57035424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032627_57034756
ES.35142.42	chr9	+	4626	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	40	-462	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	83.6327681551738	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGAAGTTCACCTTC	NA	False	NA	9	True	NA	NA	NA	56979363	57035186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.43	chr9	+	5081	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	100.70697935898	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56979373	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.44	chr9	+	4567	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	59	-394	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	72.8316380428176	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTCCCATGGGACTGT	NA	False	NA	77	True	NA	NA	NA	56979382	57035254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.45	chr9	+	5229	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	75	174	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	83.6327681551738	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGACAAGTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	56979398	57035824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.46	chr9	+	4695	20	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	83	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	99.461876213676	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGTCCCTTGTCCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	56979406	57035652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56979501_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014881_57017928_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.47	chr9	+	5386	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-1597	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	95.4507202696763	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGTCCCTTGTCCTCTC	NA	False	NA	NA	False	AATAAA	-26	NA	56981024	57035652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.48	chr9	+	5160	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-1596	-212	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	74.3763907432997	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56981025	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.49	chr9	+	5369	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-1596	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	74.3763907432997	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56981025	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.5	chr9	+	6653	31	Fusion	ENSMUSG00000042557.15_ENSMUSG00000032290.8	novel	4845	20	NA	NA	9	-211	multi-exon	FALSE	canonical	0	0	junction_11	138.687053789778	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56902215	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.50	chr9	+	7210	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-1596	1732	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	103.904325432281	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTGTATTATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	56981025	57037382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011882_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.51	chr9	+	5482	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-1595	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	103.538352682426	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAAGTCCCTTGTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	56981026	57035649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025449_57026376_57026472_57032452_57032661_57034431
ES.35142.52	chr9	+	5275	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-1593	-211	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	101.085760944654	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56981028	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.53	chr9	+	4806	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-1501	-471	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	74.3763907432997	539	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCTGAGTCCTTGAAG	NA	False	NA	0	True	NA	NA	NA	56981120	57035177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.54	chr9	+	5145	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-1473	-212	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	84.1134909814078	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56981148	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.56	chr9	+	5363	22	NNC	ENSMUSG00000042557.15	novel	4899	21	NA	NA	-1473	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	101.085760944654	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56981148	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981555_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.57	chr9	+	5166	21	NNC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	-1473	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.319378273149	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTAACATAAGTCCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	56981148	57035644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56981476_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.59	chr9	+	5245	22	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_19	96.376058599643	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATAAGTCCCTTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	56983629	57035648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.6	chr9	+	3930	14	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.2291885083568	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTTAGTTTCATCA	NA	False	NA	NA	False	TATAAA	-16	NA	56902261	56970089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56943834_56943947_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ES.35142.60	chr9	+	5242	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	-27	-9	-27	7	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTTGTCCTCTCCAAAG	NA	False	NA	NA	False	AATAAA	-31	NA	56983632	57035657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.61	chr9	+	5246	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-27	119	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCAACAGTGAGGCCAG	NA	False	NA	NA	False	AATAAA	-26	NA	56983632	57035769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.62	chr9	+	4662	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-25	-461	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGAAGTTCACCTTCT	NA	False	NA	10	True	NA	NA	NA	56983634	57035187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.64	chr9	+	4768	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	-22	460	-22	-460	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAAGTTCACCTTCTT	NA	False	NA	11	True	NA	NA	NA	56983637	57035188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.65	chr9	+	5017	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	-22	211	-22	-211	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56983637	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.67	chr9	+	5116	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-21	-3	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983638	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.68	chr9	+	4893	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-21	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.2433973673902	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56983638	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002596_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.69	chr9	+	6853	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-21	1732	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTGTATTATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	56983638	57037382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.7	chr9	+	6936	11	ISM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	55	-15	55	15	intron_retention	FALSE	canonical	3	24	junction_7	5.28772162656091	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTGACAGTCTGGGGT	NA	False	NA	NA	False	ATTAAA	-15	NA	56902261	56970106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994
ES.35142.70	chr9	+	3633	17	NNC	ENSMUSG00000042557.15	novel	5086	21	NA	NA	-19	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	83.1034511542692	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAAGTAACATAAG	NA	False	NA	NA	False	AATAAA	-12	NA	56983640	57035638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57035335
ES.35142.71	chr9	+	4913	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	-41	214	-18	-212	multi-exon	FALSE	canonical	3	20	junction_18	80.3800970390059	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56983641	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.72	chr9	+	4273	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-211	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	81.7901430491474	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56983641	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032499_57034901
ES.35142.73	chr9	+	5083	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.250979222796	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983641	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001750_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.74	chr9	+	5122	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	-41	5	-18	-3	multi-exon	FALSE	canonical	3	20	junction_18	80.3800970390059	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983641	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ES.35142.75	chr9	+	4820	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	84.2503857557934	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56983641	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014721_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.76	chr9	+	4832	22	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	82.2214806609937	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983641	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034533_57034813
ES.35142.77	chr9	+	9629	44	Fusion	ENSMUSG00000042557.15_ENSMUSG00000032295.16	novel	3820	26	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_21	86.8000879787607	826	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGGTGCCTTGCTGT	NA	False	NA	17	True	AATAAA	-18	NA	56983642	57049491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034547_57037407_57038940_57040805_57042184_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046701_57047151_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ES.35142.78	chr9	+	6736	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-17	1619	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGACAAGTTATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	56983642	57037269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.79	chr9	+	4902	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-15	-211	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56983644	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.8	chr9	+	4292	15	NNC	ENSMUSG00000032290.8	novel	4101	13	NA	NA	61	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.642090724229	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTTAGTTTCATCA	NA	False	NA	NA	False	TATAAA	-16	NA	56902267	56970089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56902941_56910546_56910719_56922171_56922252_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967135_56967346_56968228
ES.35142.80	chr9	+	4923	20	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	85.9107634687202	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56983651	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.81	chr9	+	4205	22	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-7	1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	82.2214806609937	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTTTCTGTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	56983652	57037547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034609_57037407
ES.35142.82	chr9	+	4877	23	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	97.3435277596524	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAAGTCCCTTGTCCT	NA	False	NA	NA	False	AATAAA	-23	NA	56983653	57035649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034911_57035246
ES.35142.84	chr9	+	5144	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.319378273149	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACATAAGTCCCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983655	57035645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983960_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.85	chr9	+	4689	23	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	97.3435277596524	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAAGTAACATAAG	NA	False	NA	NA	False	AATAAA	-12	NA	56983660	57035638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431_57034823_57035328
ES.35142.86	chr9	+	5319	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	1	-114	1	112	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACATATCAACAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	56983660	57035762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.87	chr9	+	3202	16	NNC	ENSMUSG00000042557.15	novel	5086	21	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	83.5256447645472	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAGTAACATAAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	56983660	57035640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018194_57035335
ES.35142.88	chr9	+	4834	21	NNC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	3	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.4452515125936	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCTAGCTTCTTG	NA	False	NA	20	True	ATTAAA	-24	NA	56983662	57035436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011927_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.9	chr9	+	5294	21	Fusion	ENSMUSG00000042557.15_ENSMUSG00000032290.8	novel	4845	20	NA	NA	73	-210	multi-exon	FALSE	canonical	0	0	junction_1	76.319378273149	633	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTCTAGCTTCTTGTG	NA	False	NA	22	True	ATTAAA	-26	NA	56902279	57035438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_56902941_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.92	chr9	+	6301	20	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-9	-470	intron_retention	FALSE	canonical	3	134	junction_1	53.2124784898807	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTGAGTCCTTGAAGT	NA	False	NA	1	True	NA	NA	NA	56983673	57035178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.93	chr9	+	4068	21	NIC	ENSMUSG00000042557.15	novel	5206	22	NA	NA	-9	-1016	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	51.8689454298041	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACGGCACAGTATTCAA	NA	False	NA	NA	False	NA	NA	NA	56983673	57034632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.95	chr9	+	4746	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	-12	111	-12	-109	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCATTGTAGTACTTTTG	NA	False	NA	123	True	TATAAA	-42	NA	56993852	57035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.96	chr9	+	6086	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	-2	-1239	-2	1239	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGAATTTTGCCTTGGA	NA	False	NA	NA	False	NA	NA	NA	56993862	57036889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.97	chr9	+	4839	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	-2	8	-2	-6	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGTAACATAAGTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	56993862	57035642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.98	chr9	+	4624	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	-2	223	-2	-221	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTAGCATAACTGCTCT	NA	False	NA	11	True	ATTAAA	-15	NA	56993862	57035427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35142.99	chr9	+	4236	18	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	7854	213	-813	-211	3prime_fragment	FALSE	canonical	3	239	junction_7	36.4221689972422	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	4190	False	NA	21	True	ATTAAA	-25	NA	57001718	57035437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ES.35143.1	chr9	-	155	1	Intergenic	novelGene_28516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56909514	56909359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56909400_56909500
ES.35144.1	chr9	-	176	1	Intergenic	novelGene_28517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAACGTCCTTCC	9946	False	NA	NA	False	NA	NA	NA	56918037	56917861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56917900_56918000
ES.35145.1	chr9	-	173	1	Intergenic	novelGene_28521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAAAGTGACTGT	5966	False	NA	NA	False	NA	NA	NA	56944828	56944655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56944700_56944800
ES.35146.1	chr9	-	2808	4	NNC	ENSMUSG00000074284.7	novel	1241	3	NA	NA	12	3040	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTTGACTGCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	56979238	56960873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56961598_56963217_56964423_56964552_56965086_56978892
ES.35146.2	chr9	-	4506	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	-1263	-2002	-1104	2002	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTCTGACTCTGTTCC	NA	False	NA	NA	False	AATACA	-15	NA	56980354	56961911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56964423_56964552_56965086_56978892
ES.35146.3	chr9	-	2402	3	NNC	ENSMUSG00000074284.7	novel	1241	3	NA	NA	47	1446	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAATCCCTTGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	56979203	56962467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_56964423_56964949_56965086_56978892
ES.35146.4	chr9	-	2827	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	-147	-1439	12	1439	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTTGGAATCCCTT	NA	False	NA	NA	False	NA	NA	NA	56979238	56962474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56964423_56964552_56965086_56978892
ES.35146.5	chr9	-	1117	3	FSM	ENSMUSG00000074284.7	ENSMUST00000128125.2	1241	3	-148	272	11	-272	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTATCTCCACTGTGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56979239	56964185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_56964423_56964552_56965086_56978892
ES.35146.6	chr9	-	5971	1	Intergenic	novelGene_28522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	56978086	56972115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56972100_56978100
ES.35146.7	chr9	-	2650	1	Intergenic	novelGene_28523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCCCCTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	56976178	56973528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56973500_56976200
ES.35147.1	chr9	-	208	1	Intergenic	novelGene_28524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTCACTAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	56982236	56982028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_56982000_56982200
ES.35148.1	chr9	-	180	1	Intergenic	novelGene_28525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCTTCCTGTAATC	NA	False	NA	NA	False	NA	NA	NA	57006017	57005837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57005800_57006000
ES.35149.1	chr9	-	901	2	FSM	ENSMUSG00000086728.3	ENSMUST00000142077.3	841	2	-60	0	-14	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGTCCCTTGTTTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	57038588	57037266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57037412_57037832
ES.3515.1	chr10	+	5985	14	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	13.1792377508074	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTAGACCTATCG	NA	False	NA	12	True	AATAAA	-22	NA	86614858	86674253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656750_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.10	chr10	+	3449	1	Intergenic	novelGene_2691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGTGGACTTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	86634375	86637824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_86634400_86637800
ES.3515.11	chr10	+	5331	10	ISM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	36846	1	-9252	-1	3prime_fragment	FALSE	canonical	3	23	junction_9	6.46357314322177	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTGTTAGACCTATC	NA	False	NA	11	True	AATAAA	-21	NA	86651714	86674252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.12	chr10	+	5031	7	ISM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	41662	9	-4436	-9	3prime_fragment	FALSE	canonical	3	23	junction_6	5.70574758954123	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGGTATGTGTGTTA	NA	False	NA	3	True	AATAAA	-13	NA	86656530	86674244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.13	chr10	+	4453	1	NIC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	8826	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTATGTGTGTTAG	NA	False	NA	4	True	AATAAA	-14	NA	86669792	86674245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_86669800_86674200
ES.3515.14	chr10	+	1973	2	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	11148	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGGTATGTGTGTTA	NA	False	NA	3	True	AATAAA	-13	NA	86672114	86674244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86672123_86672279
ES.3515.15	chr10	+	4135	1	Genic_Genomic	ENSMUSG00000089959.2	novel	NA	NA	NA	NA	-489	-32215	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAGAGTCATATTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	86674468	86678603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_86674500_86678600
ES.3515.16	chr10	+	1650	1	Intergenic	novelGene_2692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTCAGAGCCACAAG	NA	False	NA	NA	False	AATAAA	-15	NA	86679649	86681299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_86679600_86681300
ES.3515.17	chr10	+	3200	1	Antisense	novelGene_ENSMUSG00000035459.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGTGTCCATTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	86682687	86685887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_86682700_86685900
ES.3515.2	chr10	+	5961	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	-8	-1	-8	1	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGTTAGACCTATCGG	NA	False	NA	13	True	AATAAA	-23	NA	86614860	86674254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.4	chr10	+	1692	13	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	8	6528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	13.4835290467873	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGAGGCTCTGCGGGTG	NA	False	NA	NA	False	AATGAA	-19	NA	86614876	86680781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86680509
ES.3515.5	chr10	+	5747	13	NIC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	12	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.6897670623799	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTATGTGTGTTAG	NA	False	NA	4	True	AATAAA	-14	NA	86614880	86674245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_86615176_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.6	chr10	+	2583	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	30	3339	30	1043	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTGCTCTGTTATCAA	NA	False	NA	NA	False	NA	NA	NA	86614898	86670914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.3515.7	chr10	+	3315	15	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	33	21744	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	15.7170452122554	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACCAATTCTGCTGCTT	NA	False	NA	NA	False	TATAAA	-15	NA	86614901	86695997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86694036_86695262_86695367
ES.3515.8	chr10	+	5903	14	NNC	ENSMUSG00000054027.9	novel	5952	14	NA	NA	33	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.7678405174599	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCCTGGTATGTGTGTT	NA	False	NA	2	True	AATAAA	-12	NA	86614901	86674243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648239_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ES.35150.1	chr9	+	1490	1	Antisense	novelGene_ENSMUSG00000032298.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	57054468	57055958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57054500_57056000
ES.35151.1	chr9	-	2023	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	-319	-11	-141	11	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGGCAGGCTACCT	NA	False	NA	0	True	AATAAA	-16	NA	57055730	57050072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ES.35151.10	chr9	-	1437	10	FSM	ENSMUSG00000032298.14	ENSMUST00000186410.7	1601	10	164	0	-14	0	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTTTCTGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	57055425	57050353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ES.35151.11	chr9	-	4148	2	ISM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	-309	-184	-309	-2	intron_retention	FALSE	canonical	3	56	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTGGTCTTTCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	57054627	57050355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57050611_57050734
ES.35151.2	chr9	-	1419	10	NNC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-17	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.5889865756687	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTGGGCAGGCTACCT	NA	False	NA	0	True	AATAAA	-16	NA	57055428	57050072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57050611_57050734_57050898_57051041_57051104_57051450_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57053973_57054266_57054342_57055367
ES.35151.4	chr9	-	3398	7	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-19	0	intron_retention	FALSE	canonical	3	40	junction_6	6.80685928555405	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055430	57050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57054342_57055367
ES.35151.5	chr9	-	3090	9	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	40	junction_8	5.97782360060917	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055425	57050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57054342_57055367
ES.35151.6	chr9	-	4136	7	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	289	0	intron_retention	FALSE	canonical	3	50	junction_5	4.25897744639355	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055122	57050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57052022_57052228_57052293_57052381
ES.35151.7	chr9	-	3716	6	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-14	0	intron_retention	FALSE	canonical	3	40	junction_5	7.31026675299883	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055425	57050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57051291_57051470_57052022_57052228_57052293_57052381_57054342_57055367
ES.35151.8	chr9	-	5045	4	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	-50	0	intron_retention	FALSE	canonical	3	50	junction_3	4.89897948556636	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055639	57050083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57051291_57051470_57052022_57052228
ES.35151.9	chr9	-	1339	9	NIC	ENSMUSG00000032298.14	novel	1693	10	NA	NA	23	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16.1704785025057	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTTTCTGCTCCATG	NA	False	NA	NA	False	NA	NA	NA	57055388	57050352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57050611_57050734_57050898_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ES.35152.1	chr9	-	2202	6	ISM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	19	-4	4	0	intron_retention	FALSE	canonical	3	898	junction_5	102.766531516832	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6296	False	NA	0	True	AATAAA	-19	NA	57065596	57062318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058
ES.35152.11	chr9	-	2634	4	ISM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	25	1	10	-1	intron_retention	FALSE	canonical	3	1100	junction_3	52.3832034148352	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTATGGGTCTTGCTTG	6302	False	NA	-5	True	AATAAA	-14	NA	57065590	57062323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455
ES.35152.12	chr9	-	1681	4	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	18	0	intron_retention	FALSE	canonical	3	701	junction_3	220.821194634935	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6310	False	NA	-6	True	AATAAA	-13	NA	57065582	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57064423_57065555
ES.35152.13	chr9	-	1286	6	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	701	junction_5	174.995542800381	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6292	False	NA	-6	True	AATAAA	-13	NA	57065600	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57064423_57065555
ES.35152.14	chr9	-	966	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	362	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	380.53040319415	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6693	False	NA	-6	True	AATAAA	-13	NA	57065199	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065029
ES.35152.15	chr9	-	3144	2	ISM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	16	2	1	0	intron_retention	FALSE	canonical	3	1106	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6293	False	NA	-6	True	AATAAA	-13	NA	57065599	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695
ES.35152.16	chr9	-	794	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	362.561127850976	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6310	False	NA	-6	True	AATAAA	-13	NA	57065582	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57062565_57062695_57062840_57063181_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.17	chr9	-	1471	5	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	701	junction_4	192.183506056061	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6296	False	NA	-6	True	AATAAA	-13	NA	57065596	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063576_57063799_57064423_57065555
ES.35152.18	chr9	-	2158	2	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	701	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6277	False	NA	-6	True	AATAAA	-13	NA	57065615	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57064423_57065555
ES.35152.19	chr9	-	703	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	384.323829023853	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6310	False	NA	-6	True	AATAAA	-13	NA	57065582	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.2	chr9	-	861	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	1	-4	1	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6278	False	NA	0	True	AATAAA	-19	NA	57065614	57062318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.20	chr9	-	1985	7	NIC	ENSMUSG00000032299.11	novel	1941	7	NA	NA	18	0	intron_retention	FALSE	canonical	3	92	junction_3	368.932581917076	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6310	False	NA	-6	True	AATAAA	-13	NA	57065582	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57063840_57064058_57064125_57064350
ES.35152.21	chr9	-	2397	5	ISM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	-17	6	-17	0	intron_retention	FALSE	canonical	3	1051	junction_4	59.5246797555434	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6314	False	NA	-6	True	AATAAA	-13	NA	57065578	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799
ES.35152.22	chr9	-	3276	1	FSM	ENSMUSG00000032299.11	ENSMUST00000213161.2	437	1	-2843	4	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6292	False	NA	-6	True	AATAAA	-13	NA	57065600	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57062300_57065600
ES.35152.23	chr9	-	1063	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	701	junction_6	167.641151140033	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6296	False	NA	-6	True	AATAAA	-13	NA	57065596	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064423_57065555
ES.35152.24	chr9	-	654	6	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	506.432384430538	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6293	False	NA	-6	True	AATAAA	-13	NA	57065599	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063799_57063840_57064350_57064423_57065555
ES.35152.25	chr9	-	1303	6	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	12	0	intron_retention	FALSE	canonical	3	92	junction_3	408.342699212316	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6304	False	NA	-6	True	AATAAA	-13	NA	57065588	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57064423_57065555
ES.35152.27	chr9	-	870	8	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	347.483959400742	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	6292	False	NA	-6	True	AATAAA	-13	NA	57065600	57062324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.28	chr9	-	1284	6	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	162	junction_4	383.125775692526	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTATGGGTCTTGCT	6288	False	NA	-7	True	AATAAA	-12	NA	57065604	57062325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063576_57063799_57063840_57064033_57064423_57065555
ES.35152.3	chr9	-	1075	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	701	junction_6	168.402708476504	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6288	False	NA	0	True	AATAAA	-19	NA	57065604	57062318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.30	chr9	-	795	8	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	385.576695036282	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6303	False	NA	-8	True	AATAAA	-11	NA	57065589	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064092_57064350_57064423_57065555
ES.35152.32	chr9	-	3013	2	NIC	ENSMUSG00000032299.11	novel	414	6	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	1051	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6329	False	NA	-8	True	AATAAA	-11	NA	57065563	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57063576_57063799
ES.35152.33	chr9	-	1969	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	-36	8	3	-2	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6295	False	NA	-8	True	AATAAA	-11	NA	57065597	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
ES.35152.34	chr9	-	1036	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	701	junction_6	163.576349825463	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6314	False	NA	-8	True	AATAAA	-11	NA	57065578	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57064125_57064350_57064423_57065555
ES.35152.35	chr9	-	1485	5	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	701	junction_4	195.430774188714	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6315	False	NA	-8	True	AATAAA	-11	NA	57065577	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57064423_57065555
ES.35152.36	chr9	-	782	7	NNC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	417.286871748122	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGTATGGGTCTTGC	6288	False	NA	-8	True	AATAAA	-11	NA	57065604	57062326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064345_57064423_57065555
ES.35152.37	chr9	-	1230	6	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	701	junction_5	178.470165573969	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGTGTATGGGTCTTG	6315	False	NA	-9	True	AATAAA	-10	NA	57065577	57062327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063576_57063799_57063840_57064058_57064423_57065555
ES.35152.38	chr9	-	2358	5	NIC	ENSMUSG00000032299.11	novel	1941	7	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	898	junction_4	113.959148382216	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGTGTATGGGTCTTG	6320	False	NA	-9	True	AATAAA	-10	NA	57065572	57062327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063576_57063799_57063840_57064058
ES.35152.40	chr9	-	1909	7	NNC	ENSMUSG00000032299.11	novel	1941	7	NA	NA	0	-3	intron_retention	FALSE	canonical	3	3	junction_6	409.942136838305	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGTGTATGGGTCTTG	6331	False	NA	-9	True	AATAAA	-10	NA	57065561	57062327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064423_57064671
ES.35152.41	chr9	-	894	8	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-17	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	375.737641859588	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCAATGTGTATGGGT	6314	False	NA	-13	True	AATAAA	-6	NA	57065578	57062331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063349_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ES.35152.5	chr9	-	1479	5	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	701	junction_4	193.424888522651	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6292	False	NA	0	True	AATAAA	-19	NA	57065600	57062318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57064125_57064350_57064423_57065555
ES.35152.6	chr9	-	2138	6	NIC	ENSMUSG00000032299.11	novel	1941	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	898	junction_4	113.930505133612	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6323	False	NA	0	True	AATAAA	-19	NA	57065569	57062318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063576_57063799_57063840_57064058_57064125_57064350
ES.35152.7	chr9	-	1102	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	-16	0	intron_retention	FALSE	canonical	3	92	junction_3	448.83107438471	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	6315	False	NA	-2	True	AATAAA	-17	NA	57065577	57062320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57063840_57064033_57064423_57065555
ES.35152.8	chr9	-	2157	6	ISM	ENSMUSG00000032299.11	ENSMUST00000214640.2	703	7	-1105	-41	33	0	intron_retention	FALSE	canonical	3	162	junction_5	385.98942990709	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGGTCTTGCTTGCTT	6364	False	NA	-2	True	AATAAA	-17	NA	57065528	57062320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064033
ES.35152.9	chr9	-	2795	3	ISM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	0	4	0	0	intron_retention	FALSE	canonical	3	1106	junction_1	54	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6331	False	NA	-4	True	AATAAA	-15	NA	57065561	57062322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57062565_57062695_57062873_57063185
ES.35153.1	chr9	-	176	1	Intergenic	novelGene_28526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAGATATATAACTA	NA	False	NA	NA	False	NA	NA	NA	57083269	57083093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57083100_57083300
ES.35154.1	chr9	+	172	1	Intergenic	novelGene_28527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGTAAC	4865	False	NA	NA	False	NA	NA	NA	57085945	57086117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57085900_57086100
ES.35155.1	chr9	+	2017	1	Intergenic	novelGene_28528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAAGAGTTTGTAACTA	1159	False	NA	NA	False	NA	NA	NA	57112028	57114045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57112000_57114000
ES.35156.1	chr9	-	370	1	Intergenic	novelGene_28529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57120444	57120074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57120100_57120400
ES.35157.1	chr9	+	1248	1	Intergenic	novelGene_28530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACAGTCTCTCGTGAAT	NA	False	NA	NA	False	NA	NA	NA	57128102	57129350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57128100_57129400
ES.35158.1	chr9	-	4825	2	ISM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	4589	-1974	3486	1974	3prime_fragment	FALSE	canonical	3	41	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTTGTCATTTCCTG	NA	False	NA	NA	False	ACTAAA	-13	NA	57165306	57158425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57161613_57163668
ES.35158.2	chr9	-	4213	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	-14	-47	-14	47	multi-exon	FALSE	canonical	3	41	junction_1	39.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCCGTCACCATCTGGC	NA	False	NA	40	True	NA	NA	NA	57169909	57160352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57161613_57163668_57166424_57169711
ES.35158.3	chr9	-	3546	4	NNC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.8018295067784	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169878	57160399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57161613_57163668_57165562_57166150_57166424_57169711
ES.35158.4	chr9	-	5064	3	NIC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	231	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	19	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169599	57160399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57161613_57163668_57166424_57168503
ES.35158.5	chr9	-	3629	1	NIC	ENSMUSG00000032300.8	novel	4152	3	NA	NA	4763	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGATCTAGCTTTGTA	NA	False	NA	-8	True	ATTAAA	-20	NA	57164029	57160400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57160400_57164000
ES.35158.6	chr9	-	3697	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	20	435	5	58	multi-exon	FALSE	canonical	3	41	junction_1	39.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCAAGTCTTCATGTGT	NA	False	NA	NA	False	NA	NA	NA	57169875	57160834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57161613_57163668_57166424_57169711
ES.35159.1	chr9	+	178	1	Intergenic	novelGene_28531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATTCAAGCCCT	NA	False	NA	NA	False	NA	NA	NA	57191656	57191834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57191700_57191800
ES.3516.1	chr10	-	2130	14	ISM	ENSMUSG00000035459.19	ENSMUST00000035288.17	8228	69	146547	10	17480	-10	3prime_fragment	FALSE	canonical	0	0	junction_1	1.77424039918012	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAAAAGTCACTGTGT	8146	False	NA	NA	False	NA	NA	NA	86697342	86677071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_86677523_86679364_86679482_86681893_86682023_86682731_86682840_86683888_86684030_86684797_86684918_86686420_86686528_86686641_86686805_86689408_86689543_86690963_86691106_86692409_86692604_86693971_86694080_86695607_86695713_86697231
ES.35160.1	chr9	-	180	1	Intergenic	novelGene_28532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	57217975	57217795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57217800_57218000
ES.35161.1	chr9	-	186	1	Intergenic	novelGene_28533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGGGGGGGGGCTT	NA	False	NA	NA	False	NA	NA	NA	57240282	57240096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57240100_57240300
ES.35162.1	chr9	+	1476	1	Antisense	novelGene_ENSMUSG00000063849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTTGGGGGATGAAGGG	NA	False	NA	NA	False	NA	NA	NA	57331944	57333420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57331900_57333400
ES.35162.2	chr9	+	2082	1	Antisense	novelGene_ENSMUSG00000063849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCACCACCAACAAC	NA	False	NA	NA	False	NA	NA	NA	57332476	57334558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57332500_57334600
ES.35163.1	chr9	-	2145	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	13	-493	2	493	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTTCAGTGTGTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	57347377	57320750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.10	chr9	-	1438	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	-3	1309	-2	-1	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347382	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.11	chr9	-	2725	8	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.9612119521905	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347342	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57345280_57345434_57346396
ES.35163.13	chr9	-	1790	8	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	62.7050107036666	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347376	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57326953_57327094_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.14	chr9	-	2318	12	Fusion	ENSMUSG00000040722.8_ENSMUSG00000063849.7	novel	1665	7	NA	NA	8	-1	multi-exon	FALSE	canonical	0	0	junction_6	44.0255372923977	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57375312	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57350956_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.15	chr9	-	1901	8	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	54.2157443809039	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347378	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346396_57346646_57347352
ES.35163.16	chr9	-	1932	8	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.763348360802	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347331	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346396_57346646_57347274
ES.35163.17	chr9	-	1660	8	NNC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	62.7050107036666	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347378	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322538_57326867_57327094_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.18	chr9	-	1209	5	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_2	55.6169938058504	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347378	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57322010_57322368_57322538_57342185_57342369_57344699_57344766_57347352
ES.35163.19	chr9	-	2209	9	NNC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.6140938540787	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGACTGTGTCCTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	57347355	57321245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57345280_57345434_57346396_57346646_57346955
ES.35163.2	chr9	-	1940	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	-11	815	0	493	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTTCAGTGTGTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	57347390	57320750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.21	chr9	-	4193	6	ISM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	56	3	40	-3	3prime_fragment	FALSE	canonical	3	110	junction_2	14.3303872941383	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGAGACTGTGTCCTTCT	NA	False	NA	-7	True	AATAAA	-14	NA	57347334	57321246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699
ES.35163.22	chr9	-	1363	6	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	62.5792297811343	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGACTGTGTCCTTC	NA	False	NA	-8	True	AATAAA	-13	NA	57347376	57321247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57347352
ES.35163.23	chr9	-	644	5	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	7	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.3957528335429	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTTAGTAGGCAGAGCA	NA	False	NA	NA	False	NA	NA	NA	57347367	57322589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322756_57340883_57341098_57342185_57342369_57344699_57344766_57347352
ES.35163.24	chr9	-	5475	1	Genic_Genomic	ENSMUSG00000040722.8	novel	NA	NA	NA	NA	1546	955	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGGAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57353129	57347654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_57347700_57353100
ES.35163.25	chr9	-	3134	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-87	-2372	-64	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375407	57348609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.26	chr9	-	3305	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	-80	0	-78	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375421	57348609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ES.35163.27	chr9	-	8296	5	NIC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-44	0	intron_retention	FALSE	canonical	3	133	junction_4	19.5751756058534	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375387	57348609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57352773_57353354_57358768_57359262_57359318_57375215
ES.35163.28	chr9	-	3064	6	NNC	ENSMUSG00000040722.8	novel	675	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	58.262852659306	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375320	57348609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352790_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.29	chr9	-	3650	5	NIC	ENSMUSG00000040722.8	novel	675	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	101	junction_2	28.4780617317963	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375342	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.3	chr9	-	1691	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	-24	-2	-7	2	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTGTCCTTCTTTACA	NA	False	NA	-2	True	AATAAA	-19	NA	57347414	57321241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.30	chr9	-	7423	6	NIC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	19	-1	intron_retention	FALSE	canonical	3	62	junction_5	45.7427589898117	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375301	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57358768_57359262_57359318_57375098
ES.35163.31	chr9	-	3517	3	NIC	ENSMUSG00000040722.8	novel	790	4	NA	NA	138	-1	intron_retention	FALSE	canonical	3	67	junction_2	35	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57354537	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57353457_57354359
ES.35163.32	chr9	-	3225	6	NIC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	-39	-1	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375382	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
ES.35163.33	chr9	-	3383	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	-40	-2318	-40	-1	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375383	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
ES.35163.34	chr9	-	3084	7	NNC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.0308801142346	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375281	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375042_57375120_57375215
ES.35163.35	chr9	-	3044	6	NNC	ENSMUSG00000040722.8	novel	675	6	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	60.067961510276	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375293	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352798_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.37	chr9	-	3706	5	NIC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	62	junction_4	43.9737137390055	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375281	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57353457_57358638_57358768_57359262_57359318_57375098
ES.35163.38	chr9	-	3081	6	NNC	ENSMUSG00000040722.8	novel	675	6	NA	NA	-6254	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	58.2992281252505	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57360929	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57360789
ES.35163.39	chr9	-	3581	7	NNC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-6232	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	57.7571544389861	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57360907	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57360424
ES.35163.4	chr9	-	6347	6	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	115	junction_5	12.5602547744861	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347382	57321243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57322010_57322368_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ES.35163.40	chr9	-	3236	6	NNC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	61.5161767342542	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57375368	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352798_57353354_57353457_57358638_57358768_57359262_57359318_57375098
ES.35163.41	chr9	-	3105	7	NNC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-6213	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.8660854592009	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	False	NA	-1	True	AATAAA	-19	NA	57360888	57348610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57360424_57360490_57360789
ES.35163.43	chr9	-	4626	5	NIC	ENSMUSG00000040722.8	novel	675	6	NA	NA	-51	-2	intron_retention	FALSE	canonical	3	101	junction_2	28.4725745235657	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCTCTGTGTTACTT	NA	False	NA	-2	True	AATAAA	-18	NA	57375394	57348611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.44	chr9	-	3195	6	NNC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	59.9919994665955	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCTCTGTGTTACTT	NA	False	NA	-2	True	AATAAA	-18	NA	57375336	57348611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352790_57353354_57353457_57358638_57358768_57359262_57359318_57375098
ES.35163.45	chr9	-	5358	2	NIC	ENSMUSG00000040722.8	novel	790	4	NA	NA	123	-3	intron_retention	FALSE	canonical	3	138	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCCCTCTGTGTTACT	NA	False	NA	-3	True	AATAAA	-17	NA	57354552	57348612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57352773_57353354
ES.35163.46	chr9	-	5132	4	NIC	ENSMUSG00000040722.8	novel	675	6	NA	NA	0	-4	intron_retention	FALSE	canonical	3	101	junction_1	32.8768746825012	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTCTGTGTTAC	NA	False	NA	-4	True	AATAAA	-16	NA	57375320	57348613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57353457_57358638_57358768_57359262_57359318_57375215
ES.35163.47	chr9	-	3224	7	NNC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-6243	-4	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_6	57.7571544389861	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTCTGTGTTAC	NA	False	NA	-4	True	AATAAA	-16	NA	57360918	57348613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57360789
ES.35163.48	chr9	-	1048	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	-13	2190	-11	94	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTACGTATATGTAT	NA	False	NA	NA	False	NA	NA	NA	57375354	57350799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ES.35163.49	chr9	-	1129	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	23	-127	0	92	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTGTACGTATATGT	NA	False	NA	NA	False	NA	NA	NA	57375320	57350801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
ES.35163.50	chr9	-	858	6	NIC	ENSMUSG00000040722.8	novel	675	6	NA	NA	63	83	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATATGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	57375215	57350810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
ES.35163.6	chr9	-	2361	7	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	25	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	53.0251512649108	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347349	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346396
ES.35163.7	chr9	-	3722	7	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	12	junction_6	47.9562879668095	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347376	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57345280
ES.35163.8	chr9	-	1987	7	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	51.1913621185797	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347316	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346955
ES.35163.9	chr9	-	2278	8	NNC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	55.2434315977373	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGACTGTGTCCTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	57347358	57321244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57346396_57346646_57346955
ES.35164.1	chr9	-	2282	1	Intergenic	novelGene_28534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57381621	57379339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57379300_57381600
ES.35165.1	chr9	-	3051	2	Intergenic	novelGene_28536	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCGTCTGTTCGTGAT	NA	False	NA	NA	False	NA	NA	NA	57388333	57384460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57387233_57388054
ES.35165.2	chr9	-	3822	1	Intergenic	novelGene_28535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCGTCTGTTCGTGAT	NA	False	NA	NA	False	NA	NA	NA	57388282	57384460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57384500_57388300
ES.35165.3	chr9	-	3069	1	Intergenic	novelGene_28537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGACTGGTACAGACT	NA	False	NA	NA	False	NA	NA	NA	57388337	57385268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57385300_57388300
ES.35166.1	chr9	+	172	1	Intergenic	novelGene_28540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCCACACCCACAGTGA	NA	False	NA	NA	False	NA	NA	NA	57402238	57402410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57402200_57402400
ES.35167.1	chr9	-	4800	1	Intergenic	novelGene_28538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTGTTTTCTGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	57405934	57401134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57401100_57405900
ES.35167.2	chr9	-	1723	1	Intergenic	novelGene_28539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCGGCTCCTTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	57403367	57401644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57401600_57403400
ES.35168.1	chr9	+	1759	1	FSM	ENSMUSG00000062309.9	ENSMUST00000080514.9	1423	1	-331	-5	-331	5	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCAGTTTTGTTCTTTTT	NA	False	NA	17	True	AATAAA	-22	NA	57410977	57412736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57411000_57412700
ES.35168.2	chr9	+	1361	2	Genic_Genomic	ENSMUSG00000062309.9	novel	1423	1	NA	NA	-8	0	multi-exon	FALSE	canonical	3	12	junction_1	0	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	12	True	AATAAA	-17	NA	57411300	57412731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_57411538_57411607
ES.35169.1	chr9	+	973	6	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-13676	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3656.49872965929	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGTCTTGTGATGTTG	NA	False	NA	21	True	AATAAA	-21	NA	57414880	57439708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57414999_57428350_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ES.35169.11	chr9	+	628	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-25	-2	at_least_one_novel_splicesite	FALSE	canonical	3	193	junction_3	3765.3630967013	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	347	False	NA	20	True	AATAAA	-20	NA	57428531	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57428699_57436238_57436356_57437523_57437646_57438996_57439076_57439564
ES.35169.13	chr9	+	3150	3	NIC	ENSMUSG00000000088.8	novel	1818	4	NA	NA	-25	1	intron_retention	FALSE	canonical	3	7868	junction_2	447	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	347	False	NA	23	True	AATAAA	-23	NA	57428531	57439710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57428699_57436238_57439076_57439564
ES.35169.14	chr9	+	666	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3849.17094969813	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	348	False	NA	20	True	AATAAA	-20	NA	57428532	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57428699_57436238_57436350_57437523_57437646_57438951_57439076_57439564
ES.35169.15	chr9	+	1977	4	NIC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	7868	junction_3	732.807538777331	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	349	False	NA	20	True	AATAAA	-20	NA	57428533	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57428699_57436238_57436356_57437523_57439076_57439564
ES.35169.17	chr9	+	1745	4	NNC	ENSMUSG00000000088.8	novel	1818	4	NA	NA	21	-2	intron_retention	FALSE	canonical	3	193	junction_2	3846.10368497205	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	398	False	NA	20	True	AATAAA	-20	NA	57428582	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57428699_57436238_57437646_57438996_57439076_57439564
ES.35169.18	chr9	+	1790	4	FSM	ENSMUSG00000000088.8	ENSMUST00000213678.2	1818	4	26	2	21	-2	multi-exon	FALSE	canonical	3	7868	junction_3	735.670820106082	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	398	False	NA	20	True	AATAAA	-20	NA	57428582	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57428699_57436238_57437646_57438951_57439076_57439564
ES.35169.19	chr9	+	6409	1	Intergenic	novelGene_28546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACTTAATGCTCTTTGG	681	False	NA	NA	False	NA	NA	NA	57428865	57435274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57428900_57435300
ES.35169.2	chr9	+	2253	1	Intergenic	novelGene_28541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	57414882	57417135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57414900_57417100
ES.35169.20	chr9	+	2188	1	Antisense	novelGene_ENSMUSG00000097445.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	57439848	57442036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57439800_57442000
ES.35169.3	chr9	+	3677	1	Intergenic	novelGene_28542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	57415045	57418722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57415000_57418700
ES.35169.4	chr9	+	155	1	Intergenic	novelGene_28543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	57422143	57422298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57422100_57422300
ES.35169.5	chr9	+	1497	1	Intergenic	novelGene_28544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAAAACAAGTTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	57422268	57423765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57422300_57423800
ES.35169.6	chr9	+	155	1	Intergenic	novelGene_28545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCAGATG	NA	False	NA	NA	False	NA	NA	NA	57422494	57422649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57422500_57422600
ES.35169.7	chr9	+	902	6	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-739	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4326.83328081866	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGTCTTGTGATGTT	NA	False	NA	20	True	AATAAA	-20	NA	57427817	57439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57427870_57428350_57428699_57436238_57436356_57437527_57437646_57438951_57439076_57439564
ES.35169.9	chr9	+	4677	2	ISM	ENSMUSG00000000088.8	ENSMUST00000213678.2	1818	4	-72	-992	-72	992	intron_retention	FALSE	canonical	3	8762	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAGAAGGAGGAGG	300	False	NA	NA	False	NA	NA	NA	57428484	57440701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57428699_57436238
ES.3517.1	chr10	+	4143	1	FSM	ENSMUSG00000089775.2	ENSMUST00000160327.2	3238	1	1059	-1964	1059	1964	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTAGACATTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	86746401	86750544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_86746400_86750500
ES.35170.1	chr9	-	1535	2	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	4340	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTTAAATTACACACAC	8761	False	NA	NA	False	NA	NA	NA	57440572	57438548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57439075_57439563
ES.35171.1	chr9	+	3054	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	-34	-3	1	3	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTACTGTGCTGCAGTG	NA	False	NA	17	True	AATAAA	-17	NA	57444811	57450470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
ES.35171.2	chr9	+	1912	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	3	1086	3	-1086	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTCTTTGCTTTA	NA	False	NA	NA	False	NA	NA	NA	57444813	57449379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
ES.35171.3	chr9	+	2997	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	5	-1	5	1	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCTGTACTGTGCTGC	NA	False	NA	13	True	AATAAA	-13	NA	57444815	57450466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
ES.35171.4	chr9	+	1313	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	5	1683	5	-1683	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCAGTTTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	57444815	57448782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
ES.35171.6	chr9	+	1937	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	-10	1090	-10	-1088	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCCTCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	57444835	57449377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
ES.35171.7	chr9	+	3362	4	NIC	ENSMUSG00000032305.16	novel	3017	5	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_3	26.3185612575358	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGCTGTACTGTGCT	NA	False	NA	11	True	AATAAA	-11	NA	57444854	57450464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57445118_57445306_57445395_57446093_57446578_57447937
ES.35171.8	chr9	+	1294	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	38	1685	-16	-1683	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCAGTTTTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	57444883	57448782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
ES.35172.1	chr9	+	2398	1	Antisense	novelGene_ENSMUSG00000032306.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTGGAGCTATAGCTCT	NA	False	NA	NA	False	NA	NA	NA	57454832	57457230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_57454800_57457200
ES.35173.1	chr9	-	7784	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	-6004	0	6004	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCTCCTAGTTCCCAT	8951	False	NA	NA	False	AATAAA	-40	NA	57460046	57445534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.10	chr9	-	3701	7	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	213	junction_6	30.2085344820889	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAAGAGCAGTCAGCC	8982	False	NA	-16	True	ATTAAA	-22	NA	57460015	57451546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57452222_57452477_57452687_57453676_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.11	chr9	-	1729	8	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	92.2881468056236	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTGAAGAGCAGTCAG	8942	False	NA	-18	True	ATTAAA	-20	NA	57460055	57451548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57452222_57452477_57452687_57453676_57453801_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.12	chr9	-	4662	5	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	-10	-10	intron_retention	FALSE	canonical	3	240	junction_3	25.6161570107618	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTGAAGAGCAGTCAG	9438	False	NA	-18	True	ATTAAA	-20	NA	57459559	57451548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57452222_57452477_57455994_57456319_57456462_57457855_57458057_57459429
ES.35173.13	chr9	-	3469	6	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	20	-11	intron_retention	FALSE	canonical	3	201	junction_3	39.2530253611107	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTGAAGAGCAGTCA	8971	False	NA	-19	True	ATTAAA	-19	NA	57460026	57451549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57458057_57459429_57459558_57459986
ES.35173.15	chr9	-	2700	8	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	-12	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.977860254389	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAGTGAAGAGCAGTC	8986	False	NA	-20	True	ATTAAA	-18	NA	57460011	57451550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57452222_57452477_57452687_57453676_57454813_57455810_57455994_57456314_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.16	chr9	-	1776	8	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	20	-12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	91.621448339995	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAGTGAAGAGCAGTC	8971	False	NA	-20	True	ATTAAA	-18	NA	57460026	57451550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57452222_57452477_57452687_57453676_57453879_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.17	chr9	-	4513	6	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	21	-13	intron_retention	FALSE	canonical	3	201	junction_3	28.4703354388388	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGAGTGAAGAGCAGT	8972	False	NA	-21	True	ATTAAA	-17	NA	57460025	57451551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57459558_57459986
ES.35173.18	chr9	-	1494	6	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	30	-14	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	106.591556888902	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACAGAGTGAAGAGCAG	9478	False	NA	-22	True	ATTAAA	-16	NA	57459519	57451552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57452222_57452477_57452687_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ES.35173.19	chr9	-	4820	2	ISM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	3418	14	327	-14	intron_retention	FALSE	canonical	3	283	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATACAGAGTGAAGAGCAG	NA	False	NA	-22	True	ATTAAA	-16	NA	57456628	57451552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57452222_57452477
ES.35173.2	chr9	-	6064	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	12	-4296	12	4296	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCATGTCCCTAACTGC	8963	False	NA	NA	False	AATAAA	-16	NA	57460034	57447242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.20	chr9	-	1478	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	-18	320	-18	-320	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCCAGGCTGGACCATC	8933	False	NA	2	True	AGTAAA	-24	NA	57460064	57451858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.3	chr9	-	4608	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	20	-2848	20	2848	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGTTCTCTTGTAACA	8971	False	NA	NA	False	AATAAA	-11	NA	57460026	57448690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.4	chr9	-	6360	2	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	-158	2795	intron_retention	FALSE	canonical	1	1	junction_1	0	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGGAGAAACTCTCCAATG	NA	False	NA	NA	False	NA	NA	NA	57457113	57448743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57453801_57455810
ES.35173.5	chr9	-	7168	1	Genic_Genomic	ENSMUSG00000032306.15	novel	NA	NA	NA	NA	1028	2779	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTCG	NA	False	NA	NA	False	NA	NA	NA	57455927	57448759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_57448800_57455900
ES.35173.6	chr9	-	4486	8	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	21	2777	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	92.2881468056236	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	8972	False	NA	NA	False	NA	NA	NA	57460025	57448761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57452222_57452477_57452687_57453676_57453801_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.7	chr9	-	3115	2	ISM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	7426	-2289	4335	2289	3prime_fragment	FALSE	canonical	3	283	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57452620	57449249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57452222_57452477
ES.35173.8	chr9	-	1794	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	-16	2	-16	-2	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCAGTCAGCCTTTGGT	8935	False	NA	-10	True	ATTAAA	-28	NA	57460062	57451540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ES.35173.9	chr9	-	2983	8	NNC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	18	-7	intron_retention	FALSE	canonical	1	1	junction_3	117.687063426526	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAGAGCAGTCAGCCT	8969	False	NA	-15	True	ATTAAA	-23	NA	57460028	57451545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57452222_57452477_57452687_57453676_57453801_57455810_57455994_57456319_57456462_57456577_57458057_57459429_57459558_57459986
ES.35174.1	chr9	+	176	2	Intergenic	novelGene_28547	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	57463860	57482820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57463985_57482768
ES.35174.10	chr9	+	4590	7	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	4	-3	intron_retention	FALSE	canonical	3	243	junction_3	17.0040844766453	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCACTGGCCCTGATGTC	NA	False	NA	10	True	AATAAA	-12	NA	57468244	57496075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57486834_57488066_57488933_57490134_57490237_57494362_57494484_57494704
ES.35174.11	chr9	+	2222	8	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	-8	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	92.0988820867694	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGATGTCAATGGTGGAC	NA	False	NA	20	True	AATAAA	-22	NA	57468248	57496085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57494362_57494484_57494704
ES.35174.13	chr9	+	3949	8	NNC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	18	junction_5	87.9800533980195	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGGCCCTGATGTCAA	NA	False	NA	12	True	AATAAA	-14	NA	57468254	57496077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57468394_57484475_57484545_57484921_57486834_57488066_57488196_57488772_57488933_57490190_57490237_57494362_57494484_57494704
ES.35174.14	chr9	+	3734	2	FSM	ENSMUSG00000040188.11	ENSMUST00000216667.2	794	2	-1878	-1062	-1878	-1	multi-exon	FALSE	canonical	3	258	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGGCCCTGATGTCAA	8210	False	NA	12	True	AATAAA	-14	NA	57492122	57496077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57494484_57494704
ES.35174.2	chr9	+	155	1	Intergenic	novelGene_28548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATGAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	57463862	57464017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57463900_57464000
ES.35174.3	chr9	+	2360	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	-18	-2	-18	2	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCCCTGATGTCAATGG	NA	False	NA	15	True	AATAAA	-17	NA	57468207	57496080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ES.35174.4	chr9	+	1349	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	-1	992	-1	71	multi-exon	FALSE	canonical	3	243	junction_4	15.3927742788621	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGGCTTGGTCTGATT	NA	False	NA	3	True	NA	NA	NA	57468224	57495086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ES.35174.5	chr9	+	1246	8	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	-1	70	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	92.0988820867694	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGGCTTGGTCTGAT	NA	False	NA	2	True	NA	NA	NA	57468224	57495085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57494362_57494484_57494704
ES.35174.6	chr9	+	5216	7	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	0	-6	intron_retention	FALSE	canonical	3	243	junction_3	16.3673115962546	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACAGCACTGGCCCTGAT	NA	False	NA	7	True	AATAAA	-9	NA	57468240	57496072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57486834_57488066_57488196_57488772_57490237_57494362_57494484_57494704
ES.35174.7	chr9	+	2262	9	NNC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	82.6706568257444	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACAGCACTGGCCCTGAT	NA	False	NA	7	True	AATAAA	-9	NA	57468241	57496072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490190_57490237_57494362_57494484_57494704
ES.35174.8	chr9	+	2454	10	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	104.968190360958	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCCCTGATGTCAATG	NA	False	NA	14	True	AATAAA	-16	NA	57468241	57496079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57485556_57485686_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ES.35174.9	chr9	+	3523	8	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	1	-3	intron_retention	FALSE	canonical	3	243	junction_4	15.6934927369822	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCACTGGCCCTGATGTC	NA	False	NA	10	True	AATAAA	-12	NA	57468241	57496075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57490237_57494362_57494484_57494704
ES.35175.1	chr9	-	175	1	Intergenic	novelGene_28549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGTTCAAAA	9104	False	NA	NA	False	NA	NA	NA	57471946	57471771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57471800_57471900
ES.35176.1	chr9	-	663	1	Intergenic	novelGene_28550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1138	False	NA	NA	False	NA	NA	NA	57479912	57479249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57479200_57479900
ES.35177.1	chr9	-	172	1	Intergenic	novelGene_28551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	612	False	NA	NA	False	NA	NA	NA	57480438	57480266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57480300_57480400
ES.35178.1	chr9	+	2923	16	FSM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	-98	1	-98	-1	multi-exon	FALSE	canonical	3	37	junction_2	6.816320284598	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATTTCTTCTTGCCTTG	NA	False	NA	32	True	ATTAAA	-16	NA	57496636	57503515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ES.35178.11	chr9	+	3468	15	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	24	-6	intron_retention	FALSE	non_canonical	0	0	junction_14	16.7565095483784	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGCATTTCTTCTTG	NA	False	NA	27	True	ATTAAA	-11	NA	57496758	57503510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501227_57501330_57501416_57501496_57501566_57501938_57502065_57502133_57502225_57503175_57503226
ES.35178.12	chr9	+	4847	9	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_1	16.7439354692975	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCATTTCTTCTTGCCTTG	NA	False	NA	32	True	ATTAAA	-16	NA	57496761	57503515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497382_57497748_57497943_57498602_57499276_57500258_57500444_57501137_57501264_57501330_57501416_57501938_57502065_57502133_57502225
ES.35178.13	chr9	+	3773	14	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	27	-7	intron_retention	FALSE	non_canonical	0	0	junction_13	13.8294771365306	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	False	NA	26	True	ATTAAA	-10	NA	57496761	57503509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225_57503175_57503226
ES.35178.14	chr9	+	3472	13	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	27	-7	intron_retention	FALSE	non_canonical	0	0	junction_12	13.9729401185132	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	False	NA	26	True	ATTAAA	-10	NA	57496761	57503509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499697_57500101_57500258_57500444_57500782_57501033_57501137_57501264_57501330_57501416_57501938_57502065_57502133_57502225_57503175_57503230
ES.35178.15	chr9	+	3770	14	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	28	-5	intron_retention	TRUE	non_canonical	0	0	junction_13	13.8896751914174	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57496762	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498602_57499276_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225_57503178_57503230
ES.35178.17	chr9	+	3232	15	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	30	-6	intron_retention	FALSE	canonical	2	2	junction_9	12.8809303758284	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGCATTTCTTCTTG	NA	False	NA	27	True	ATTAAA	-11	NA	57496764	57503510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501227_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ES.35178.18	chr9	+	3228	15	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	31	-7	intron_retention	FALSE	canonical	0	0	junction_3	18.8193615021057	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	False	NA	26	True	ATTAAA	-10	NA	57496765	57503509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57498020_57498183_57498496_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500746_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ES.35178.19	chr9	+	2651	17	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	18.1149756762188	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57496771	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57498020_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501419_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225_57503175_57503227
ES.35178.2	chr9	+	2967	16	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	-7	-5	intron_retention	FALSE	non_canonical	0	0	junction_15	12.6304746105952	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57496727	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225_57503177_57503227
ES.35178.20	chr9	+	4203	11	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	40	-6	intron_retention	FALSE	non_canonical	0	0	junction_10	15.5935884260166	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGCATTTCTTCTTG	NA	False	NA	27	True	ATTAAA	-11	NA	57496774	57503510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498602_57499276_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501938_57502065_57503171_57503223
ES.35178.22	chr9	+	4179	10	NIC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	-231	-5	intron_retention	FALSE	canonical	3	37	junction_1	8.06608507239179	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57497396	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57497748_57497943_57498602_57499276_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501938_57502065_57502133_57502225
ES.35178.23	chr9	+	3882	8	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	363	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	21.5766313498693	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57498279	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57498598_57499276_57500258_57500444_57501137_57501264_57501330_57501416_57501938_57502065_57502133_57502225_57503175_57503222
ES.35178.3	chr9	+	2762	17	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	15.7855501567098	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCATTTCTTCTTGCC	NA	False	NA	29	True	ATTAAA	-13	NA	57496738	57503512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501569_57501608_57501889_57501938_57502065_57502133_57502225_57503167_57503219
ES.35178.4	chr9	+	3538	14	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	6	-6	intron_retention	FALSE	canonical	2	2	junction_9	13.2981290671429	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATGCATTTCTTCTTG	NA	False	NA	27	True	ATTAAA	-11	NA	57496740	57503510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501227_57501330_57501416_57501496_57501566_57501938_57502065_57502133_57502225
ES.35178.5	chr9	+	2856	16	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.8736679231151	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCATTTCTTCTTGCCT	NA	False	NA	30	True	ATTAAA	-14	NA	57496742	57503513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57498020_57498183_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ES.35178.6	chr9	+	4389	10	NIC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	9	-7	intron_retention	FALSE	canonical	3	37	junction_6	7.49979423586054	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	False	NA	26	True	ATTAAA	-10	NA	57496743	57503509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57496970_57497606_57498602_57499276_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501938_57502065_57502133_57502225
ES.35178.7	chr9	+	3419	14	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	11	-5	intron_retention	FALSE	canonical	1	1	junction_5	16.7261266768331	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGCATTTCTTCTTGC	NA	False	NA	28	True	ATTAAA	-12	NA	57496745	57503511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57498020_57498602_57499276_57499421_57499613_57499697_57500129_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501938_57502065_57502133_57502225
ES.35178.8	chr9	+	2746	17	NNC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	12.5847129486532	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	False	NA	26	True	ATTAAA	-10	NA	57496751	57503509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225_57503175_57503230
ES.35178.9	chr9	+	4278	10	NIC	ENSMUSG00000032308.10	novel	2826	16	NA	NA	18	-9	intron_retention	FALSE	canonical	3	37	junction_7	7.74596669241483	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACTTATGCATTTCTTC	NA	False	NA	24	True	ATTAAA	-8	NA	57496752	57503507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57496970_57497606_57498602_57499276_57499421_57499613_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501938_57502065
ES.35179.1	chr9	+	3759	1	Intergenic	novelGene_28552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTACTTAAGCTCCAAAG	6304	False	NA	NA	False	NA	NA	NA	57547781	57551540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57547800_57551500
ES.3518.1	chr10	-	174	1	Intergenic	novelGene_2693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	87395392	87395218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_87395200_87395400
ES.35180.1	chr9	+	214	1	Intergenic	novelGene_28553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTAAAGGTTAGACGC	NA	False	NA	NA	False	NA	NA	NA	57556257	57556471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57556300_57556500
ES.35181.1	chr9	+	189	1	Intergenic	novelGene_28554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	57557048	57557237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57557000_57557200
ES.35182.1	chr9	+	175	1	Intergenic	novelGene_28555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	57557273	57557448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57557300_57557400
ES.35183.1	chr9	-	2760	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	-10	-1	-10	1	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGGCGCTTCCTCC	NA	False	NA	-24	True	AATAAA	-24	NA	57552946	57533927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ES.35183.10	chr9	-	2292	13	NNC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	277	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.3576960033691	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGCCTCGGCGCTTCC	650	False	NA	-27	True	AATAAA	-21	NA	57552115	57533930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57551911
ES.35183.11	chr9	-	3110	15	NNC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.9767996268692	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCAGCCTCGGCGCTTC	NA	False	NA	-28	True	AATAAA	-20	NA	57560718	57533931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57537204_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57559849_57559986_57560559
ES.35183.12	chr9	-	2787	16	NNC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	36	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	53.4588522967795	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCGCCACCCAGCCTCGG	NA	False	NA	-34	True	AATAAA	-14	NA	57560718	57533937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57558405_57558656_57559114_57559276_57559849_57559986_57560559
ES.35183.13	chr9	-	2472	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	5	272	5	-5	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTACGAATCTTATTT	NA	False	NA	NA	False	AAGAAA	-25	NA	57552931	57534200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ES.35183.14	chr9	-	2342	12	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-14	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	36.9835791124513	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTACGAATCTTATTT	NA	False	NA	NA	False	AAGAAA	-25	NA	57552914	57534200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57538177_57538292_57538649_57538727_57552277
ES.35183.15	chr9	-	2504	14	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	-14	-7	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAGTACGAATCTTAT	NA	False	NA	NA	False	AAGAAA	-23	NA	57552914	57534202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
ES.35183.2	chr9	-	3007	12	NIC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	100	junction_11	11.9413165657022	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57552903	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57538076_57538177_57538292_57538649_57538727_57552277
ES.35183.3	chr9	-	2809	14	NIC	ENSMUSG00000032312.8	novel	2162	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57552946	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
ES.35183.4	chr9	-	2457	15	NNC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	48.9283107396601	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57560717	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57559849_57559899_57560559
ES.35183.5	chr9	-	1686	8	NIC	ENSMUSG00000032312.8	novel	2162	13	NA	NA	762	0	intron_retention	FALSE	canonical	3	111	junction_6	10.1820169606888	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57537491	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536350_57536542_57536637_57537450
ES.35183.6	chr9	-	2445	14	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	43.0998565326625	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57560754	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559114_57559276_57560559
ES.35183.7	chr9	-	3452	12	NNC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_7	37.0362788413364	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57552880	57533929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57537204_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ES.35183.8	chr9	-	2936	14	NNC	ENSMUSG00000032312.8	novel	2749	13	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	44.5116831947344	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGCCTCGGCGCTTCC	NA	False	NA	-27	True	AATAAA	-21	NA	57552946	57533930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57551328_57551508_57552277
ES.35183.9	chr9	-	2391	14	NIC	ENSMUSG00000032312.8	novel	2390	15	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	43.6356620886765	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCAGCCTCGGCGCTTCC	NA	False	NA	-27	True	AATAAA	-21	NA	57560726	57533930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57559849_57559986_57560559
ES.35184.1	chr9	-	158	1	Intergenic	novelGene_28556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	57570695	57570537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57570500_57570700
ES.35185.1	chr9	+	3377	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	0	2331	0	-1235	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGAGTGAAGTGCTGCT	NA	False	NA	21	True	AATAAA	-31	NA	57615822	57657451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.10	chr9	+	3432	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	-6	-1240	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	108.44936747682	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	16	True	AATAAA	-26	NA	57615843	57657446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57649059_57649141_57651867_57652086_57655443
ES.35185.11	chr9	+	2104	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	-5	-2621	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.864981239161	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTGTCAGGTTTACA	NA	False	NA	NA	False	NA	NA	NA	57615844	57656065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57615983_57619623_57619759_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.12	chr9	+	5686	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	22	0	-5	0	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTCCAACTGATTCT	NA	False	NA	NA	False	GATAAA	-16	NA	57615844	57659782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.13	chr9	+	6199	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	23	-514	-4	514	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCAGCTATTCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	57615845	57660296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.14	chr9	+	5365	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	8	-1096	-4	0	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTCCAACTGATTCT	NA	False	NA	NA	False	GATAAA	-16	NA	57615845	57659782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.15	chr9	+	3094	7	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	1	-1251	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	119.19510150263	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCTAAACTGCTTCCT	NA	False	NA	5	True	AATAAA	-15	NA	57615850	57657435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57649059_57649141_57651867_57652086_57655443
ES.35185.16	chr9	+	5856	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	17	-1596	5	500	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGCCACCACATCCA	NA	False	NA	NA	False	NA	NA	NA	57615854	57660282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.17	chr9	+	2281	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	46	3381	19	-2285	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGCTGTCATCAGCAG	NA	False	NA	NA	False	NA	NA	NA	57615868	57656401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.18	chr9	+	3912	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	46	1750	19	-654	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCTTGGGTCCAAT	NA	False	NA	NA	False	AAGAAA	-25	NA	57615868	57658032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.2	chr9	+	2013	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	0	-1243	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	86.0609655762609	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTCCTAGAGTGAA	NA	False	NA	13	True	AATAAA	-23	NA	57615822	57657443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443_57655716_57657071
ES.35185.20	chr9	+	3214	6	ISM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	4839	2336	4812	-1240	3prime_fragment	FALSE	canonical	3	211	junction_2	27.9112880390712	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	NA	False	NA	16	True	AATAAA	-26	NA	57620661	57657446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.21	chr9	+	3105	3	ISM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	30605	1240	30593	-1240	3prime_fragment	FALSE	canonical	3	244	junction_2	25	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTAGAGTGAAGTG	647	False	NA	16	True	AATAAA	-26	NA	57646442	57657446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57647327_57651867_57652086_57655443
ES.35185.22	chr9	+	4102	2	ISM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	34153	1236	34141	-1236	3prime_fragment	FALSE	canonical	3	244	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAGTGAAGTGCTGC	4195	False	NA	20	True	AATAAA	-30	NA	57649990	57657450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_57652086_57655443
ES.35185.3	chr9	+	3055	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	-14	1236	1	-1236	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAGTGAAGTGCTGC	NA	False	NA	20	True	AATAAA	-30	NA	57615823	57657450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.4	chr9	+	2178	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	6	3524	6	-2428	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCGTGTGTGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	57615828	57656258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.5	chr9	+	3498	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	6	-1243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.864981239161	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTCCTAGAGTGAA	NA	False	NA	13	True	AATAAA	-23	NA	57615828	57657443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57615983_57619623_57619759_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.6	chr9	+	1959	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	20	3729	5	-2633	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCAGCTCTAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	57615842	57656053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.7	chr9	+	1778	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	21	3909	-6	-2813	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATCTCTTGGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	57615843	57655873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35185.9	chr9	+	2915	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	21	2772	-6	-1676	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCAGGCTGCTTCCTTG	NA	False	NA	NA	False	AGTAAA	-16	NA	57615843	57657010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ES.35186.1	chr9	-	216	1	Intergenic	novelGene_28557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGCTTTCTCTCCAGC	3708	False	NA	NA	False	NA	NA	NA	57624971	57624755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57624800_57625000
ES.35187.1	chr9	-	1840	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	25	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	94.4161885836675	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGAAAGCCAAGTGTG	9850	False	NA	-7	True	AATAAA	-20	NA	57672361	57657902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672319
ES.35187.10	chr9	-	2025	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	232	junction_9	46.9341018594728	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9813	False	NA	-11	True	AATAAA	-19	NA	57672398	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57666007_57668106_57668324_57668998_57669151_57672356
ES.35187.11	chr9	-	2808	9	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	36	junction_6	100.305704598492	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9822	False	NA	-11	True	AATAAA	-19	NA	57672389	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659111_57659397_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.12	chr9	-	4790	11	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	232	junction_9	46.626601849159	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9894	False	NA	-11	True	AATAAA	-19	NA	57672133	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998
ES.35187.13	chr9	-	2365	12	NNC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	24	0	intron_retention	FALSE	canonical	2	11	junction_11	98.4603792446065	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9849	False	NA	-11	True	AATAAA	-19	NA	57672362	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672319
ES.35187.14	chr9	-	4761	10	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	-15	0	intron_retention	FALSE	canonical	3	243	junction_9	42.9352081486212	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9792	False	NA	-11	True	AATAAA	-19	NA	57672419	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57668324_57668998_57669151_57672356
ES.35187.15	chr9	-	4863	11	NIC	ENSMUSG00000032316.9	novel	3924	12	NA	NA	-169	0	intron_retention	FALSE	canonical	3	243	junction_10	44.7326502680089	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	8899	False	NA	-11	True	AATAAA	-19	NA	57673312	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
ES.35187.16	chr9	-	4186	11	FSM	ENSMUSG00000032316.9	ENSMUST00000215109.2	4130	11	-55	-1	13	0	multi-exon	FALSE	canonical	3	243	junction_10	41.0098768591177	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9752	False	NA	-11	True	AATAAA	-19	NA	57672459	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57668324_57668998_57669151_57672356
ES.35187.19	chr9	-	3362	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	-999	0	-253	0	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	8815	False	NA	-11	True	AATAAA	-19	NA	57673396	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ES.35187.2	chr9	-	3997	12	FSM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	-70	-3	16	3	multi-exon	FALSE	canonical	3	243	junction_11	42.6560334546315	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGGAAAGCCAAGTGT	9755	False	NA	-8	True	AATAAA	-19	NA	57672456	57657903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
ES.35187.20	chr9	-	1750	11	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	36	junction_8	95.2711918682662	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9815	False	NA	-11	True	AATAAA	-19	NA	57672396	57657993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.21	chr9	-	7016	11	ISM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	26	88	26	0	intron_retention	FALSE	canonical	3	263	junction_9	37.4247244478834	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9851	False	NA	-12	True	AATAAA	-18	NA	57672360	57657994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998
ES.35187.22	chr9	-	3474	7	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	136.030633804792	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	9815	False	NA	-12	True	AATAAA	-18	NA	57672396	57657994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659478_57660553_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.23	chr9	-	3291	19	Fusion	ENSMUSG00000004661.16_ENSMUSG00000032316.9	novel	2496	13	NA	NA	6	0	multi-exon	FALSE	canonical	1	1	junction_11	99.9486287802976	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCCCTGGTACCAGTGT	NA	False	NA	-12	True	AATAAA	-18	NA	57744038	57657994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.24	chr9	-	1705	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	96.6423820070677	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCCCTGGTACCAGTG	9804	False	NA	-13	True	AATAAA	-17	NA	57672407	57657995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666146_57668296_57668324_57668998_57669151_57672356
ES.35187.27	chr9	-	4104	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-50	1	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATGGGATCCTTTCAC	NA	False	NA	-2	True	AATAAA	-21	NA	57744126	57697634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.28	chr9	-	4050	9	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_2	104.756786772982	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744065	57697635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702315_57703389_57703647_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.29	chr9	-	6288	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	15	-4334	-8	0	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57744061	57697635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.3	chr9	-	2811	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	-228	-87	-228	2	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTGGAAAGCCAAGTG	8840	False	NA	-9	True	AATAAA	-18	NA	57673371	57657904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ES.35187.30	chr9	-	4313	9	FSM	ENSMUSG00000004661.16	ENSMUST00000171444.8	4171	9	-140	-2	-55	-1	multi-exon	FALSE	canonical	2	19	junction_8	71.7791752529938	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57744131	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743758
ES.35187.32	chr9	-	3047	6	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	95.0347304936464	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57744092	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57703913_57741431_57741516_57743964
ES.35187.33	chr9	-	3306	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4210	-1	intron_retention	FALSE	canonical	3	7	junction_5	89.1748843565272	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57707714	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707586
ES.35187.34	chr9	-	3939	7	NIC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	176	-1	intron_retention	FALSE	canonical	3	208	junction_3	16.190703779913	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57741343	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717764_57740898
ES.35187.35	chr9	-	3268	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4544	-1	intron_retention	FALSE	canonical	3	5	junction_5	89.9653266542172	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57708048	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707958
ES.35187.36	chr9	-	4015	9	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	79.0971514973833	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTATGGGATCCTTTC	NA	False	NA	-4	True	AATAAA	-19	NA	57744046	57697636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740905_57741516_57743964
ES.35187.37	chr9	-	3478	8	NIC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-44	1	intron_retention	FALSE	canonical	2	10	junction_7	78.8576604537879	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTATGGGATCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57744120	57697637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57743964
ES.35187.39	chr9	-	4720	9	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-4	1	intron_retention	FALSE	canonical	0	0	junction_2	79.539200241139	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTATGGGATCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57744057	57697637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57702701_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.4	chr9	-	2508	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTGGAAAGCCAAGTG	9046	False	NA	-9	True	AATAAA	-18	NA	57673165	57657904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.40	chr9	-	3889	10	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1720659964381	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGTATGGGATCCTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57744103	57697637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57698681_57698869_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.42	chr9	-	2999	6	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	95.0347304936464	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTATGGGATCCTT	NA	False	NA	-6	True	AATAAA	-17	NA	57744042	57697638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57703921_57741435_57741516_57743964
ES.35187.43	chr9	-	5116	8	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	208	junction_2	16.634117877153	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTATGGGATCCTT	NA	False	NA	-6	True	AATAAA	-17	NA	57744070	57697638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.47	chr9	-	5383	9	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	9	1	intron_retention	FALSE	canonical	1	1	junction_1	77.7769245984952	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCCAGTATGGGATCC	NA	False	NA	-8	True	AATAAA	-15	NA	57744035	57697640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57701345_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.5	chr9	-	1826	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.7685411351725	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTGTGGAAAGCCAAG	9816	False	NA	-11	True	AATAAA	-16	NA	57672395	57657906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57658405_57659019_57659104_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ES.35187.51	chr9	-	3735	8	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	2704	-3	intron_retention	FALSE	canonical	0	0	junction_7	82.2921624457639	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACATGAGCCAGTATGGG	NA	False	NA	-12	True	AATAAA	-11	NA	57738815	57697644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57738395
ES.35187.52	chr9	-	3948	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-38	17	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATAGCACATGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	57744114	57697778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.53	chr9	-	3971	9	NNC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_8	77.9437898424243	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	57744068	57697795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743878
ES.35187.54	chr9	-	2841	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	-17	579	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	16.1303285769385	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAATTTTTATTGT	NA	False	NA	NA	False	NA	NA	NA	57744093	57698864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.55	chr9	-	1975	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	-6	0	-6	0	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTTTCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	57744082	57701969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.56	chr9	-	4236	4	ISM	ENSMUSG00000004661.16	ENSMUST00000164035.8	3119	8	-13	12098	-4	1346	5prime_fragment	FALSE	canonical	3	222	junction_1	12.7104506432917	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTGGGTGGTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	57744057	57714066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57717521_57717691_57717764_57740898_57741516_57743964
ES.35187.6	chr9	-	4752	12	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	1033	-83	26	-2	3prime_fragment	FALSE	canonical	3	232	junction_10	44.4674641946314	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCTTGTGGAAAGCCA	9917	False	NA	-13	True	AATAAA	-14	NA	57672110	57657908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998
ES.35187.7	chr9	-	3416	8	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_2	141.285353170129	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTTGTGGAAAGCC	9811	False	NA	-14	True	AATAAA	-13	NA	57672400	57657909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659478_57659927_57660011_57660783_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.8	chr9	-	3095	11	NIC	ENSMUSG00000032316.9	novel	2363	12	NA	NA	1	-3	intron_retention	FALSE	canonical	3	36	junction_8	95.4897376685055	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTTGTGGAAAGCC	9069	False	NA	-14	True	AATAAA	-13	NA	57673142	57657909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
ES.35187.9	chr9	-	4919	9	NIC	ENSMUSG00000032316.9	novel	4130	11	NA	NA	4	-3	intron_retention	FALSE	canonical	3	243	junction_8	45.5027471698138	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTTGTGGAAAGCC	9818	False	NA	-14	True	AATAAA	-13	NA	57672393	57657909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660879_57661784_57661952_57662534_57662652_57665566_57668324_57668998_57669151_57672356
ES.35188.1	chr9	-	195	1	Intergenic	novelGene_28558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTATGTGTGTACA	3330	False	NA	NA	False	NA	NA	NA	57762891	57762696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57762700_57762900
ES.35189.1	chr9	-	157	1	Intergenic	novelGene_28559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	57768760	57768603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57768600_57768800
ES.3519.1	chr10	-	178	1	Intergenic	novelGene_2694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATGTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87456960	87456782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_87456800_87457000
ES.35190.1	chr9	+	172	1	Intergenic	novelGene_28560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGAGCAGAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	57815179	57815351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57815200_57815400
ES.35191.1	chr9	+	3695	12	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	-2265	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	95.5400482857649	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57815996	57837253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818291_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.10	chr9	+	1459	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	-31	-2	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	88.2161549830869	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818285	57837251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.11	chr9	+	2260	11	NNC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	102.581723518373	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGCCTGCCGTGTCCA	NA	False	NA	9	True	AATATA	-10	NA	57818289	57837244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57828086_57828226_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.12	chr9	+	1706	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	28	-370	6	370	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCTGTGTCTCACCA	NA	False	NA	NA	False	AATATA	-21	NA	57818296	57837621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.13	chr9	+	1650	12	NIC	ENSMUSG00000055720.11	novel	1426	11	NA	NA	-7	12	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	96.747349249356	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTTGGCCTTCTTATTG	NA	False	NA	28	True	AATATA	-29	NA	57818326	57837263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818566_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.14	chr9	+	1526	12	NIC	ENSMUSG00000055720.11	novel	1426	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	95.7810002035894	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818327	57837251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818455_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.15	chr9	+	5834	9	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	94	1	intron_retention	FALSE	canonical	3	271	junction_8	18.0260228558604	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCGTGTCCAGTGCTT	NA	False	NA	15	True	AATATA	-16	NA	57820010	57837250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57820134_57821836_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.16	chr9	+	3313	7	NNC	ENSMUSG00000055720.11	novel	1426	11	NA	NA	-902	0	intron_retention	TRUE	non_canonical	0	0	junction_2	111.900873792636	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCGTGTCCAGTGCT	NA	False	NA	14	True	AATATA	-15	NA	57825546	57837249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57826675_57827321_57828077_57828208_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.17	chr9	+	155	1	Intergenic	novelGene_28561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACATAAAACAAATAAATA	2159	False	NA	NA	False	NA	NA	NA	57829449	57829604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_57829400_57829600
ES.35191.2	chr9	+	1689	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	-369	-1	-369	1	multi-exon	FALSE	canonical	3	39	junction_1	82.3315856764583	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	17	True	AATATA	-18	NA	57817892	57837252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.3	chr9	+	3128	11	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	12	junction_1	99.2804109580536	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818264	57837251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818291_57818999_57819109_57819920_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.4	chr9	+	1366	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	0	-2	0	2	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGTCCAGTGCTTGGC	NA	False	NA	18	True	AATATA	-19	NA	57818268	57837253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.5	chr9	+	1474	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGTCCAGTGCTTGG	NA	False	NA	17	True	AATATA	-18	NA	57818268	57837252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.6	chr9	+	6377	9	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	118	junction_1	63.9804657688579	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCGTGTCCAGTGCTT	NA	False	NA	15	True	AATATA	-16	NA	57818269	57837250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818343_57819920_57820134_57821836_57826675_57827321_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35191.7	chr9	+	2209	11	NNC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	1	-2977	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_10	102.604873178617	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTTGTGATCATGGT	NA	False	NA	NA	False	NA	NA	NA	57818269	57834272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57833170
ES.35191.9	chr9	+	1944	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	-6	487	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACTACTTGCACCAG	NA	False	NA	NA	False	TATAAA	-14	NA	57818284	57837738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ES.35192.1	chr9	+	3312	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	-16	1	-15	-1	multi-exon	TRUE	canonical	1	1	junction_4	2.43495258328376	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTGTGCCCTGTC	NA	False	NA	10	True	AATAAA	-15	NA	57847379	57870147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ES.35193.1	chr9	+	1504	2	FSM	ENSMUSG00000097604.2	ENSMUST00000181289.2	2169	2	49	616	49	-616	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTTTATTATTTAT	NA	False	NA	22	True	AATACA	-18	NA	57905372	57914118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_57905602_57912843
ES.35193.2	chr9	+	1412	2	NNC	ENSMUSG00000032323.14	novel	539	4	NA	NA	-1966	-13905	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTATTATTTATTT	583	False	NA	24	True	AATACA	-20	NA	57911727	57914120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57911863_57912843
ES.35193.3	chr9	+	1608	2	NNC	ENSMUSG00000032323.14	novel	539	4	NA	NA	-1805	-13912	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTAATTTTTTTATTA	744	False	NA	17	True	AATACA	-13	NA	57911888	57914113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_57912227_57912843
ES.35194.1	chr9	-	226	1	Intergenic	novelGene_28562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGGTTTAATCCTAAG	NA	False	NA	NA	False	NA	NA	NA	57915126	57914900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_57914900_57915100
ES.35195.1	chr9	+	2158	13	ISM	ENSMUSG00000032327.15	ENSMUST00000167479.8	2871	19	6487	3	6342	-3	3prime_fragment	TRUE	canonical	1	2	junction_3	1.99304345718357	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACTGTCCGTAAAGCT	NA	False	NA	NA	False	NA	NA	NA	58048434	58061276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_58048506_58050197_58050321_58052743_58052812_58052995_58053076_58053280_58053343_58054744_58054908_58056462_58056539_58057360_58057495_58058443_58058562_58058645_58058748_58059161_58059326_58059727_58059884_58060435
ES.35196.1	chr9	+	176	1	Intergenic	novelGene_28563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTACCTCTC	NA	False	NA	NA	False	NA	NA	NA	58077170	58077346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58077200_58077300
ES.35197.1	chr9	-	2466	5	NNC	ENSMUSG00000037206.16	novel	802	4	NA	NA	9127	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	58102462	58063588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58065514_58066244_58066439_58097180_58097340_58102044_58102176_58102405
ES.35197.2	chr9	-	2471	5	NNC	ENSMUSG00000037206.16	novel	802	4	NA	NA	8532	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	58103057	58063588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58065514_58066244_58066439_58097176_58097340_58102044_58102176_58102999
ES.35197.3	chr9	-	2350	4	NNC	ENSMUSG00000037206.16	novel	802	4	NA	NA	8068	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	58103521	58063588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58065514_58066244_58066439_58097176_58097340_58103453
ES.35197.4	chr9	-	187	1	Intergenic	novelGene_28564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCAGT	2222	False	NA	NA	False	NA	NA	NA	58100092	58099905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58099900_58100100
ES.35198.1	chr9	+	5123	1	FSM	ENSMUSG00000057818.9	ENSMUST00000178259.2	517	1	-4323	-283	818	29	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGTAAGTAGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	58110997	58116120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58111000_58116100
ES.35198.2	chr9	+	5402	1	FSM	ENSMUSG00000057818.9	ENSMUST00000178259.2	517	1	-4151	-734	990	480	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATGATGTTTCGTTTG	NA	False	NA	NA	False	NA	NA	NA	58111169	58116571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58111200_58116600
ES.35199.1	chr9	+	180	2	Intergenic	novelGene_28566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	134	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGAAGGAAG	577	False	NA	NA	False	NA	NA	NA	58135668	58175476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58135829_58175456
ES.35199.10	chr9	+	3441	6	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	46	-3	intron_retention	FALSE	canonical	3	282	junction_1	36.1861852092757	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAAGTGCAGCTGG	NA	False	NA	8	True	AATAAA	-19	NA	58160520	58169800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.12	chr9	+	5006	8	NNC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	58	1537	intron_retention	FALSE	non_canonical	0	0	junction_7	155.054565773946	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTTTTTGTTTGTTT	NA	False	NA	1	True	NA	NA	NA	58160532	58171340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928_58170488_58170730
ES.35199.13	chr9	+	4536	6	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	60	0	intron_retention	FALSE	canonical	3	72	junction_1	114.834837919509	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160534	58169803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58162324_58162816_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.14	chr9	+	3678	7	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	89	-3	intron_retention	FALSE	canonical	3	65	junction_2	135.979982186922	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGAAGTGCAGCTGG	NA	False	NA	8	True	AATAAA	-19	NA	58160563	58169800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.15	chr9	+	3281	8	NNC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	98	1555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.345640117253	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTGTTTTTTTTT	NA	False	NA	19	True	NA	NA	NA	58160572	58171358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58160794_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928_58170488_58170730
ES.35199.2	chr9	+	183	1	Intergenic	novelGene_28565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAGTCTATGTCA	577	False	NA	NA	False	NA	NA	NA	58135668	58135851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58135700_58135900
ES.35199.3	chr9	+	1742	2	Antisense	novelGene_ENSMUSG00000036986.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAGCAAAAAAAAAAAA	5431	False	NA	NA	False	AATAAA	-24	NA	58144983	58146875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_58145544_58145693
ES.35199.4	chr9	+	2160	8	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	150.498220207796	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	9	True	AATAAA	-20	NA	58160426	58169801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58160561_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.5	chr9	+	1843	7	NIC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	9	True	AATAAA	-20	NA	58160463	58169801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.6	chr9	+	3242	8	NNC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	31	1560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	132.748803753402	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTTTTTTTTGAG	NA	False	NA	24	True	NA	NA	NA	58160505	58171363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928_58170488_58170730
ES.35199.7	chr9	+	1922	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	60	2	32	-2	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	9	True	AATAAA	-20	NA	58160506	58169801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.8	chr9	+	2190	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	44	2	44	-2	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	False	NA	9	True	AATAAA	-20	NA	58160518	58169801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ES.35199.9	chr9	+	2784	7	NNC	ENSMUSG00000032333.7	novel	1984	7	NA	NA	46	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	139.385257470078	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGGAGAAGTGCAGCT	NA	False	NA	6	True	AATAAA	-17	NA	58160520	58169798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58166630_58167706_58168080_58168297_58168928
ES.352.1	chr1	+	154	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	39468567	39468721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39468600_39468700
ES.3520.1	chr10	-	8191	1	Intergenic	novelGene_2695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGACTTGTCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	87920383	87912192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_87912200_87920400
ES.3520.2	chr10	-	6874	2	Intergenic	novelGene_2696	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTATTGACTTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	87919273	87912196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_87912392_87912594
ES.3520.3	chr10	-	172	1	Intergenic	novelGene_2697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	2752	False	NA	NA	False	NA	NA	NA	87912585	87912413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_87912400_87912600
ES.35200.1	chr9	-	4095	4	NNC	ENSMUSG00000051243.15	novel	4303	4	NA	NA	-613	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCGGTGAGATTTTTGG	7978	False	NA	-2	True	AATAAA	-17	NA	58110847	58103582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58107267_58107554_58107745_58108562_58108656_58110719
ES.35200.10	chr9	-	4242	2	NIC	ENSMUSG00000051243.15	novel	3880	3	NA	NA	-463	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGGACTCGGTGAGAT	6760	False	NA	-8	True	AATAAA	-11	NA	58112065	58103588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58107267_58111501
ES.35200.11	chr9	-	4007	4	FSM	ENSMUSG00000051243.15	ENSMUST00000163897.8	4303	4	288	8	189	-4	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGGACTCGGTGAGAT	9545	False	NA	-8	True	AATAAA	-11	NA	58109280	58103588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58107267_58107554_58107745_58108562_58108656_58109234
ES.35200.2	chr9	-	3838	3	FSM	ENSMUSG00000051243.15	ENSMUST00000215950.2	4109	3	271	0	172	0	multi-exon	FALSE	canonical	2	3	junction_2	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTCGGTGAGATTTTT	9528	False	NA	-4	True	AATAAA	-15	NA	58109297	58103584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58107267_58108562_58108656_58109234
ES.35200.3	chr9	-	3832	3	NNC	ENSMUSG00000051243.15	novel	4109	3	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTCGGTGAGATTTTT	9575	False	NA	-4	True	AATAAA	-15	NA	58109250	58103584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58107267_58108562_58108656_58109193
ES.35200.4	chr9	-	3800	3	NIC	ENSMUSG00000051243.15	novel	4109	3	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTCGGTGAGATTTTT	9237	False	NA	-4	True	AATAAA	-15	NA	58109588	58103584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58107267_58108562_58108656_58109563
ES.35200.5	chr9	-	3980	3	FSM	ENSMUSG00000051243.15	ENSMUST00000217512.2	673	3	169	-3476	-68	-2	multi-exon	FALSE	canonical	0	0	junction_2	5.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACTCGGTGAGATTT	8760	False	NA	-6	True	AATAAA	-13	NA	58110065	58103586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58107267_58108562_58108656_58109858
ES.35200.6	chr9	-	4062	4	NIC	ENSMUSG00000051243.15	novel	4303	4	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACTCGGTGAGATTT	7225	False	NA	-6	True	AATAAA	-13	NA	58111600	58103586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58107267_58107554_58107745_58108562_58108656_58111501
ES.35200.8	chr9	-	4012	4	FSM	ENSMUSG00000051243.15	ENSMUST00000216231.2	738	4	14	-3288	14	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGACTCGGTGAGATT	9212	False	NA	-7	True	AATAAA	-12	NA	58109613	58103587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58107267_58107554_58107745_58108562_58108656_58109563
ES.35200.9	chr9	-	3871	3	FSM	ENSMUSG00000051243.15	ENSMUST00000114144.9	3880	3	2	7	2	-3	multi-exon	FALSE	canonical	2	3	junction_2	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGACTCGGTGAGATT	7225	False	NA	-7	True	AATAAA	-12	NA	58111600	58103587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58107267_58108562_58108656_58111501
ES.35201.1	chr9	-	3285	10	NNC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	6	8966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.034294200659	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGATTGTCATTTTGA	2210	False	NA	NA	False	NA	NA	NA	58157010	58116392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58117650_58117735_58117836_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.10	chr9	-	3941	6	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	-1101	903	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	142.634638149364	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	NA	False	NA	NA	False	AATAAA	-19	NA	58141779	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137268_58137370_58140435_58140531_58141635
ES.35201.100	chr9	-	3604	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	163.946552944007	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTCTGTAATTTT	2152	False	NA	-14	True	NA	NA	NA	58157068	58125825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.101	chr9	-	3327	7	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-2189	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.684956099026	709	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTCTGTAATTTT	NA	False	NA	-14	True	NA	NA	NA	58142867	58125825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58142693
ES.35201.104	chr9	-	3950	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	119.054346833704	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCATGTCTGTAATTT	2238	False	NA	-15	True	NA	NA	NA	58156982	58125826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142241_58154257_58154722_58156823
ES.35201.107	chr9	-	5061	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	-4	intron_retention	FALSE	canonical	3	249	junction_4	50.446577117354	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTCATGTCTGTAAT	2206	False	NA	-17	True	NA	NA	NA	58157014	58125828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.108	chr9	-	2913	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	113.743375875501	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTATTTCATGTCTGT	2152	False	NA	-20	True	NA	NA	NA	58157068	58125831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.109	chr9	-	5322	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-14	-10	intron_retention	FALSE	canonical	3	83	junction_1	98.5563135409168	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGCTATTTCATGTC	2190	False	NA	-23	True	NA	NA	NA	58157030	58125834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.11	chr9	-	4424	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	903	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2176	False	NA	NA	False	AATAAA	-19	NA	58157044	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.111	chr9	-	2807	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	26	-17	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	119.592363189851	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTTTGTTGCTATT	2177	False	NA	-30	True	NA	NA	NA	58157043	58125841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58156943
ES.35201.112	chr9	-	4418	7	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2192	-17	intron_retention	FALSE	canonical	2	4	junction_1	136.102187916123	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTTTGTTGCTATT	4506	False	NA	-30	True	NA	NA	NA	58154714	58125841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58128122_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257
ES.35201.113	chr9	-	5231	6	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	25	-204	intron_retention	FALSE	canonical	3	295	junction_3	33.7188374651322	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTGCAGACCACCCCG	2176	False	NA	NA	False	NA	NA	NA	58157044	58127237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.114	chr9	-	2431	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	-223	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	125.395862965967	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTATGTCCACTATCT	2152	False	NA	NA	False	NA	NA	NA	58157068	58127256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.115	chr9	-	2200	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	24	2257	24	-70	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACACCATCTCAGGTTTC	2175	False	NA	NA	False	NA	NA	NA	58157045	58127615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.117	chr9	-	10026	6	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	24	47	intron_retention	FALSE	canonical	3	178	junction_2	83.1687441290296	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAACAAACAAACAAAAA	2175	False	NA	52	True	NA	NA	NA	58157045	58128285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.118	chr9	-	3382	6	NNC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	-8	32	intron_retention	FALSE	canonical	0	0	junction_4	166.016384733556	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAAACCCAA	2196	False	NA	37	True	NA	NA	NA	58157024	58128300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58129149_58136637_58136691_58137268_58137370_58140435_58142151_58154257_58154722_58156823
ES.35201.119	chr9	-	3453	6	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	2	32	intron_retention	FALSE	canonical	3	295	junction_2	38.2549343222544	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAAACCCAA	2206	False	NA	37	True	NA	NA	NA	58157014	58128300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.12	chr9	-	4636	7	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-2189	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	155.684956099026	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	NA	False	NA	NA	False	AATAAA	-19	NA	58142867	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58142754
ES.35201.120	chr9	-	2521	7	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	25	2942	25	32	5prime_fragment	FALSE	canonical	3	178	junction_3	76.1389446268392	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAAACCCAA	2176	False	NA	37	True	NA	NA	NA	58157044	58128300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.121	chr9	-	2141	7	NNC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	-7959	32	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	131.856824708554	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAAACCCAA	9887	False	NA	37	True	NA	NA	NA	58148637	58128300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58148470
ES.35201.122	chr9	-	2682	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	2	-32	2	32	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAACAAAACCCAA	2153	False	NA	37	True	NA	NA	NA	58157067	58128300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.123	chr9	-	2392	4	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	-485	-6	intron_retention	FALSE	canonical	3	295	junction_3	27.2559881290128	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACACACAAAAAAAAAAAA	NA	False	NA	-1	True	GGGGCT	-40	NA	58141163	58128338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137912_58140435
ES.35201.124	chr9	-	3249	6	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	-1	-250	intron_retention	FALSE	canonical	3	178	junction_3	78.2677455916548	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATCTACTCTTGACCTT	2271	False	NA	NA	False	NA	NA	NA	58156949	58128582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58142217_58154257_58154722_58156823
ES.35201.125	chr9	-	2240	7	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	18	3230	18	-256	5prime_fragment	FALSE	canonical	3	178	junction_3	76.1389446268392	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCAGTAATCTACTCTT	2169	False	NA	NA	False	NA	NA	NA	58157051	58128588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.126	chr9	-	2698	8	FSM	ENSMUSG00000036986.17	ENSMUST00000153820.8	2652	8	-303	257	-303	-257	multi-exon	FALSE	canonical	3	249	junction_3	51.5692520316326	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCAGTAATCTACTCT	1848	False	NA	NA	False	NA	NA	NA	58157372	58128589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.127	chr9	-	2089	6	ISM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	-247	11135	-247	637	5prime_fragment	FALSE	canonical	3	178	junction_2	83.1687441290296	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGCAGGCACTAGCT	1904	False	NA	NA	False	AATAAA	-19	NA	58157316	58136493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.128	chr9	-	2301	6	NIC	ENSMUSG00000036986.17	novel	2652	8	NA	NA	26	633	intron_retention	FALSE	canonical	3	295	junction_2	38.698837191833	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACAGTCTGCAGGCACT	2230	False	NA	NA	False	AATAAA	-15	NA	58156990	58136497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.129	chr9	-	2556	1	Intergenic	novelGene_28567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAATTTAATCAC	7989	False	NA	NA	False	NA	NA	NA	58148358	58145802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58145800_58148400
ES.35201.13	chr9	-	4262	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	26	901	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	113.743375875501	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACACACTGTGTTCG	2177	False	NA	NA	False	AATAAA	-17	NA	58157043	58124457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.130	chr9	-	201	1	Intergenic	novelGene_28568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	564	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCCACAAGTCAAAATAAA	7121	False	NA	NA	False	NA	NA	NA	58152099	58151898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58151900_58152100
ES.35201.14	chr9	-	6151	7	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	-20	894	intron_retention	FALSE	canonical	1	2	junction_3	138.4509540114	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACACACT	2184	False	NA	NA	False	AATAAA	-10	NA	58157036	58124464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137268_58137370_58140435_58142217_58154257_58154722_58156823
ES.35201.15	chr9	-	4753	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	6451	894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	122.408483099391	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACACACT	8765	False	NA	NA	False	AATAAA	-10	NA	58150455	58124464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58150367
ES.35201.16	chr9	-	5360	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2488	894	intron_retention	FALSE	canonical	0	0	junction_6	156.481595709906	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACACACT	4802	False	NA	NA	False	AATAAA	-10	NA	58154418	58124464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58150367_58150498_58154257
ES.35201.17	chr9	-	5026	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	7	894	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	142.191674236652	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATACACACT	2211	False	NA	NA	False	AATAAA	-10	NA	58157009	58124464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.18	chr9	-	4252	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	26	893	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	163.686013791989	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAATACACAC	2177	False	NA	NA	False	AATAAA	-9	NA	58157043	58124465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58154828_58154965_58156823
ES.35201.19	chr9	-	5195	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	31	-745	-22	745	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTTATGGGCTTAT	2182	False	NA	NA	False	NA	NA	NA	58157038	58124613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.20	chr9	-	5083	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	-140	-737	-19	726	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGAGAAGGGTCAGTGT	2132	False	NA	NA	False	NA	NA	NA	58157088	58124632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.21	chr9	-	4519	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	118.59852180782	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2152	False	NA	-1	True	AGTAAA	-23	NA	58157068	58125358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140570_58141635_58142217_58154257_58154722_58156823
ES.35201.22	chr9	-	5975	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	295	junction_3	35.4526288008222	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2206	False	NA	-1	True	AGTAAA	-23	NA	58157014	58125358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.25	chr9	-	3658	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-250	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	1901	False	NA	-1	True	AGTAAA	-23	NA	58157319	58125358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.28	chr9	-	4498	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	-19	2	-19	-2	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2132	False	NA	-3	True	AGTAAA	-21	NA	58157088	58125360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.29	chr9	-	5373	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	7	-2	intron_retention	FALSE	canonical	3	18	junction_1	127.46557269405	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2211	False	NA	-3	True	AGTAAA	-21	NA	58157009	58125360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.31	chr9	-	5457	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	-24	-2	combination_of_known_junctions	FALSE	canonical	3	178	junction_3	76.1389446268392	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	2180	False	NA	-3	True	AGTAAA	-21	NA	58157040	58125360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.32	chr9	-	3909	7	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	-8070	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	136.32070031119	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	9776	False	NA	-3	True	AGTAAA	-21	NA	58148748	58125360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58148470
ES.35201.33	chr9	-	8649	4	ISM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	13880	-9	-2390	-2	intron_retention	FALSE	canonical	3	33	junction_1	150.640853245946	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGATTGCAATCTC	NA	False	NA	-3	True	AGTAAA	-21	NA	58143068	58125360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110
ES.35201.34	chr9	-	4303	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	125.395862965967	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2175	False	NA	-4	True	AGTAAA	-20	NA	58157045	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.35	chr9	-	4188	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	142.191674236652	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2152	False	NA	-4	True	AGTAAA	-20	NA	58157068	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.36	chr9	-	5421	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	24	-3	intron_retention	FALSE	canonical	3	178	junction_4	73.9716537300306	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2175	False	NA	-4	True	AGTAAA	-20	NA	58157045	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58142217_58154257_58154722_58156823
ES.35201.37	chr9	-	5376	8	NIC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	39	-3	intron_retention	FALSE	canonical	3	33	junction_1	116.074747205305	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2353	False	NA	-4	True	AGTAAA	-20	NA	58156867	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.38	chr9	-	4333	9	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	115.161232083545	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2176	False	NA	-4	True	AGTAAA	-20	NA	58157044	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.39	chr9	-	4599	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	150.045178381565	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2152	False	NA	-4	True	AGTAAA	-20	NA	58157068	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58127999_58128122_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.4	chr9	-	5179	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	904	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	125.395862965967	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACACACTGTGTTCGGGG	2206	False	NA	NA	False	AATAAA	-20	NA	58157014	58124454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.40	chr9	-	3785	8	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	131.806599196841	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2211	False	NA	-4	True	AGTAAA	-20	NA	58157009	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58142130_58142217_58154257_58154722_58156823
ES.35201.41	chr9	-	3561	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTCTGATTGCAATCT	2133	False	NA	-4	True	AGTAAA	-20	NA	58157087	58125361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.42	chr9	-	4235	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-34	4	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	94.4772492046839	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACATTCTGATTGCAA	2238	False	NA	-7	True	AGTAAA	-17	NA	58156982	58125364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.43	chr9	-	5983	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	4	intron_retention	FALSE	canonical	3	280	junction_1	41.5277684875501	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACATTCTGATTGCAA	2152	False	NA	-7	True	AGTAAA	-17	NA	58157068	58125364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.44	chr9	-	4888	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-3355	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	165.538477866389	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACATTCTGATTGCAA	NA	False	NA	-7	True	AGTAAA	-17	NA	58160424	58125364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154718_58156823_58156987_58159369_58159442_58159858
ES.35201.45	chr9	-	3291	6	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	1	4	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	131.695709876974	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACATTCTGATTGCAA	2152	False	NA	-7	True	AGTAAA	-17	NA	58157068	58125364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58156823
ES.35201.48	chr9	-	3920	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-7952	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	122.086620303549	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTAACATTCTGAT	9894	False	NA	-12	True	AGTAAA	-12	NA	58148630	58125369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58148470
ES.35201.49	chr9	-	4182	8	NIC	ENSMUSG00000036986.17	novel	4206	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	155.545124366808	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTAACATTCTGAT	2176	False	NA	-12	True	AGTAAA	-12	NA	58157044	58125369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.5	chr9	-	5231	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	15	-903	15	903	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2166	False	NA	NA	False	AATAAA	-19	NA	58157054	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.50	chr9	-	4850	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	280	junction_1	43.7506851258308	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTAACATTCTGAT	2175	False	NA	-12	True	AGTAAA	-12	NA	58157045	58125369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.52	chr9	-	3764	7	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2333	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	161.051492800698	739	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGAAACCCTAACATTCT	4647	False	NA	-15	True	AGTAAA	-9	NA	58154573	58125372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58136637_58136691_58137268_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257
ES.35201.53	chr9	-	4015	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	14	314	14	152	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTCTGTAGAAGTCCAT	2165	False	NA	NA	False	NA	NA	NA	58157055	58125672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.54	chr9	-	5643	7	NIC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	26	150	intron_retention	FALSE	canonical	3	33	junction_1	123.814938068429	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTTCTGTAGAAGTCC	2177	False	NA	NA	False	NA	NA	NA	58157043	58125674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.55	chr9	-	4543	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	149	intron_retention	FALSE	canonical	3	280	junction_1	43.7506851258308	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCTTCTGTAGAAGTC	2176	False	NA	NA	False	NA	NA	NA	58157044	58125675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.57	chr9	-	2997	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-27	149	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCTTCTGTAGAAGTC	2245	False	NA	NA	False	NA	NA	NA	58156975	58125675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.58	chr9	-	4050	9	FSM	ENSMUSG00000036986.17	ENSMUST00000135310.8	4413	9	-28	391	25	65	multi-exon	FALSE	canonical	3	33	junction_1	114.3314807916	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGCGACTCCTATGAAA	2176	False	NA	52	True	NA	NA	NA	58157044	58125759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.59	chr9	-	3724	8	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	2	60	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	136.852221802369	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATATGCGACTCCTA	2206	False	NA	47	True	NA	NA	NA	58157014	58125764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137268_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.6	chr9	-	5383	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	1	-903	1	903	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2152	False	NA	NA	False	AATAAA	-19	NA	58157068	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.60	chr9	-	4057	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	118.59852180782	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGATATGCGACTCC	2206	False	NA	45	True	NA	NA	NA	58157014	58125766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140570_58141635_58142217_58154257_58154722_58156823
ES.35201.61	chr9	-	3440	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-303	57	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCTGATATGCGACTC	1848	False	NA	44	True	NA	NA	NA	58157372	58125767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.62	chr9	-	16660	4	NIC	ENSMUSG00000036986.17	novel	4206	8	NA	NA	24	55	intron_retention	FALSE	canonical	3	349	junction_1	17.9133717900592	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATATCTGATATGCGAC	2228	False	NA	42	True	NA	NA	NA	58156992	58125769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58136691_58137110_58142217_58154257_58154722_58156823
ES.35201.63	chr9	-	2988	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	47	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTATGAAGAATATCTGA	2152	False	NA	34	True	NA	NA	NA	58157068	58125777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.64	chr9	-	4347	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	-288	422	-288	44	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGGTATGAAGAATATC	1863	False	NA	31	True	NA	NA	NA	58157357	58125780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.65	chr9	-	4661	7	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	2	12	intron_retention	FALSE	canonical	1	2	junction_3	152.10486148999	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGCTAGTTCATGAA	2206	False	NA	-1	True	NA	NA	NA	58157014	58125812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137268_58137370_58140435_58142217_58154257_58154722_58156943
ES.35201.66	chr9	-	3991	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	-108	460	-108	6	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTAATTTTGCTAGTT	2043	False	NA	-7	True	NA	NA	NA	58157177	58125818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.67	chr9	-	3731	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	142.191674236652	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTAATTTTGCTAGT	2151	False	NA	-8	True	NA	NA	NA	58157069	58125819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.68	chr9	-	3277	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-4	5	intron_retention	FALSE	canonical	0	0	junction_8	151.51876946438	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTAATTTTGCTAGT	2200	False	NA	-8	True	NA	NA	NA	58157020	58125819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154718_58156823
ES.35201.69	chr9	-	4963	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	24	5	intron_retention	FALSE	canonical	3	178	junction_4	73.9716537300306	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGTAATTTTGCTAGT	2175	False	NA	-8	True	NA	NA	NA	58157045	58125819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58142217_58154257_58154722_58156823
ES.35201.7	chr9	-	6856	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-16	903	intron_retention	FALSE	canonical	3	280	junction_1	41.5277684875501	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2188	False	NA	NA	False	AATAAA	-19	NA	58157032	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.70	chr9	-	2397	10	NNC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	153.284774919828	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTAATTTTGCTAG	2200	False	NA	-9	True	NA	NA	NA	58157020	58125820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58142130_58142217_58154257_58154722_58156823
ES.35201.71	chr9	-	2761	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.710299502448	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCTGTAATTTTGCT	2175	False	NA	-11	True	NA	NA	NA	58157045	58125822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.73	chr9	-	3335	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	141.9132129155	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2175	False	NA	-12	True	NA	NA	NA	58157045	58125823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137648_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.74	chr9	-	5022	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	178	junction_3	76.1389446268392	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2152	False	NA	-12	True	NA	NA	NA	58157068	58125823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.75	chr9	-	3044	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.112199268698	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126000_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.76	chr9	-	3385	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.311541600127	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTCTGTAATTTTGC	2176	False	NA	-12	True	NA	NA	NA	58157044	58125823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127331_58129081_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.77	chr9	-	4370	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	13	junction_1	121.486876758314	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2211	False	NA	-13	True	NA	NA	NA	58157009	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.78	chr9	-	4244	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	123.040643691424	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2200	False	NA	-13	True	NA	NA	NA	58157020	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137648_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.79	chr9	-	3153	12	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	153.695093669843	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2200	False	NA	-13	True	NA	NA	NA	58157020	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58127999_58128122_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.8	chr9	-	5056	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	903	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	126.876142578325	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2206	False	NA	NA	False	AATAAA	-19	NA	58157014	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.80	chr9	-	2805	11	NNC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	161.338278161136	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2204	False	NA	-13	True	NA	NA	NA	58157016	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127848_58128997_58129149_58136637_58136691_58137110_58137648_58137773_58137912_58140435_58140531_58142130_58142217_58154257_58154722_58156823
ES.35201.81	chr9	-	3949	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	13	junction_1	114.666908914473	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2228	False	NA	-13	True	NA	NA	NA	58156992	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.82	chr9	-	3876	8	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	132.798297259799	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2176	False	NA	-13	True	NA	NA	NA	58157044	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142241_58154257_58154722_58156823
ES.35201.84	chr9	-	3903	9	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	115.161232083545	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2143	False	NA	-13	True	NA	NA	NA	58157077	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.85	chr9	-	5378	6	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	24	0	intron_retention	FALSE	canonical	3	178	junction_3	80.0114991735563	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2175	False	NA	-13	True	NA	NA	NA	58157045	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58137370_58140435_58142217_58154257_58154722_58156823
ES.35201.86	chr9	-	2767	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	140.472043701686	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2206	False	NA	-13	True	NA	NA	NA	58157014	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.88	chr9	-	3880	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	125.395862965967	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2135	False	NA	-13	True	NA	NA	NA	58157085	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.89	chr9	-	3732	8	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	128.969225881564	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2176	False	NA	-13	True	NA	NA	NA	58157044	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156943
ES.35201.9	chr9	-	4286	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	903	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACACTGTGTTCGGG	2176	False	NA	NA	False	AATAAA	-19	NA	58157044	58124455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.90	chr9	-	4395	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	280	junction_1	43.7506851258308	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2175	False	NA	-13	True	NA	NA	NA	58157045	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.91	chr9	-	5442	7	NIC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	24	0	intron_retention	FALSE	canonical	3	33	junction_1	123.814938068429	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2228	False	NA	-13	True	NA	NA	NA	58156992	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
ES.35201.92	chr9	-	3461	8	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	25	0	intron_retention	FALSE	canonical	3	18	junction_2	146.38682331691	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2176	False	NA	-13	True	NA	NA	NA	58157044	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58126793_58127853_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.93	chr9	-	2559	8	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	162.824808820238	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2224	False	NA	-13	True	NA	NA	NA	58156996	58125824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58126012_58127105_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ES.35201.97	chr9	-	3674	8	NNC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	132	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	133.688336920509	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTCTGTAATTTT	2446	False	NA	-14	True	NA	NA	NA	58156774	58125825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156730
ES.35201.98	chr9	-	3518	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	118.29518164321	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTCTGTAATTTT	2152	False	NA	-14	True	NA	NA	NA	58157068	58125825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58142130_58142217_58154257_58154722_58156823
ES.35201.99	chr9	-	3929	7	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	-8013	-1	intron_retention	FALSE	canonical	1	1	junction_6	131.330054950622	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTCTGTAATTTT	9833	False	NA	-14	True	NA	NA	NA	58148691	58125825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58140531_58141635_58142217_58148470
ES.35202.1	chr9	-	1135	1	Antisense	novelGene_ENSMUSG00000032333.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	58162387	58161252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_58161300_58162400
ES.35202.2	chr9	-	1638	4	Antisense	novelGene_ENSMUSG00000032333.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	58164442	58161255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_58162322_58162814_58163097_58163921_58164071_58164301
ES.35203.1	chr9	-	178	1	Intergenic	novelGene_28569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCACGGG	NA	False	NA	NA	False	NA	NA	NA	58166915	58166737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58166700_58166900
ES.35204.1	chr9	-	233	1	Intergenic	novelGene_28570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGACTAAGACATGTATA	NA	False	NA	NA	False	NA	NA	NA	58170726	58170493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58170500_58170700
ES.35205.1	chr9	-	659	1	Intergenic	novelGene_28571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58176880	58176221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58176200_58176900
ES.35206.1	chr9	+	133	1	Intergenic	novelGene_28572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAAAACC	NA	False	NA	NA	False	NA	NA	NA	58179505	58179638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58179500_58179600
ES.35207.1	chr9	+	1915	1	Intergenic	novelGene_28573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58182835	58184750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58182800_58184800
ES.35208.1	chr9	-	178	1	Intergenic	novelGene_28574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	9796	False	NA	NA	False	NA	NA	NA	58188655	58188477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58188500_58188700
ES.35209.1	chr9	+	184	1	Intergenic	novelGene_28575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGCTTTGATTACTT	NA	False	NA	19	True	NA	NA	NA	58189213	58189397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58189200_58189400
ES.3521.1	chr10	-	4968	8	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	21899	4570	intron_retention	FALSE	non_canonical	0	0	junction_2	35.8164253734318	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTAATGGGTAATGTA	NA	False	NA	NA	False	AGTAAA	-26	NA	87960841	87922723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87922845_87924890_87926035_87926092_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669
ES.3521.10	chr10	-	3842	13	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-19	2710	intron_retention	FALSE	canonical	0	0	junction_1	29.3185331981136	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTATACGTTCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	87982759	87924583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87925316_87925821_87925872_87927427_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.11	chr10	-	4271	2	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	53823	2710	intron_retention	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTATACGTTCTCTTTT	1948	False	NA	NA	False	ATTAAA	-16	NA	87928917	87924583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926022_87926084
ES.3521.12	chr10	-	5310	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-17	2035	intron_retention	FALSE	canonical	2	6	junction_11	23.4016316447457	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGGTGGTATATTTAGG	NA	False	NA	NA	False	ATTAAA	-22	NA	87982757	87925258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
ES.3521.13	chr10	-	3924	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-26	776	intron_retention	FALSE	canonical	0	0	junction_10	24.7364104105668	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGATATGGTCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	87982766	87926517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979905_87982713
ES.3521.14	chr10	-	4005	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	1	776	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGATATGGTCTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	87982794	87926517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.15	chr10	-	3991	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-11	763	intron_retention	FALSE	canonical	0	0	junction_7	29.9950409124382	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCTTTATAAATACT	NA	False	NA	NA	False	ATTAAA	-21	NA	87982751	87926530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962149_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
ES.3521.16	chr10	-	4047	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-26	763	intron_retention	FALSE	canonical	2	6	junction_11	23.4016316447457	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCTTTATAAATACT	NA	False	NA	NA	False	ATTAAA	-21	NA	87982766	87926530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
ES.3521.17	chr10	-	4142	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	4	763	intron_retention	FALSE	canonical	3	12	junction_11	22.0262803213204	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTCCTTTATAAATACT	NA	False	NA	NA	False	ATTAAA	-21	NA	87982791	87926530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
ES.3521.2	chr10	-	7688	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-9	4563	intron_retention	FALSE	non_canonical	0	0	junction_1	28.0230129750237	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATTTGTTTAATGGG	NA	False	NA	NA	False	AGTAAA	-19	NA	87982749	87922730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926031_87926092_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.20	chr10	-	3958	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	223	715	intron_retention	FALSE	canonical	0	0	junction_10	24.7364104105668	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGCCCTTTTAATCC	NA	False	NA	NA	False	ATTAAA	-35	NA	87982517	87926578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982422
ES.3521.22	chr10	-	3297	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-10	49	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCTTATTGTCATCAT	NA	False	NA	38	True	TATAAA	-25	NA	87982813	87927244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.25	chr10	-	5904	10	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_7	26.0517054724771	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTGGTTTATACT	NA	False	NA	-12	True	ATTAAA	-12	NA	87982755	87927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962149_87968955_87969061_87975727_87975959_87979801
ES.3521.26	chr10	-	3356	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	27	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	28.5396635700951	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTGGTTTATACT	NA	False	NA	-12	True	ATTAAA	-12	NA	87982768	87927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982356_87982511_87982713
ES.3521.27	chr10	-	4282	3	ISM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	34248	1	34185	-1	intron_retention	FALSE	canonical	3	68	junction_2	7	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTGGTTTATACT	9032	False	NA	-12	True	ATTAAA	-12	NA	87948555	87927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_87929049_87929456_87929590_87946160
ES.3521.28	chr10	-	3194	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-22	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	29.3877525510203	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGGGTGGTTTATACT	NA	False	NA	-12	True	ATTAAA	-12	NA	87982762	87927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979966_87982726
ES.3521.3	chr10	-	7494	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-1	4319	intron_retention	TRUE	non_canonical	0	0	junction_1	28.0230129750237	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGAAAAGGTATTTTAC	NA	False	NA	NA	False	ATTAAA	-18	NA	87982804	87922974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926013_87926079_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.30	chr10	-	3505	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_7	33.6810035479942	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTGGGTGGTTTATAC	NA	False	NA	-13	True	ATTAAA	-11	NA	87982759	87927295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962149_87968955_87969061_87975727_87975954_87979801_87979958_87982357
ES.3521.31	chr10	-	5477	7	ISM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	17790	3	17727	-3	3prime_fragment	FALSE	canonical	3	53	junction_4	12.6183288204985	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTGGGTGGTTTATA	NA	False	NA	-14	True	ATTAAA	-10	NA	87965013	87927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018
ES.3521.34	chr10	-	2630	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-1	-609	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	10.555093557141	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATCCCCATTTTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	87982804	87927902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.35	chr10	-	6348	8	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	15500	-611	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	29.2609651521041	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAAATCCCCATTTTT	NA	False	NA	-4	True	AATAAA	-19	NA	87967240	87927904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87964655_87965402
ES.3521.37	chr10	-	2729	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-14	-613	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	22.0262803213204	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAAAAATCCCCATTT	NA	False	NA	-6	True	AATAAA	-17	NA	87982754	87927906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
ES.3521.38	chr10	-	6312	6	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	19031	-613	intron_retention	FALSE	canonical	3	15	junction_2	28.1097847732778	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAAAAATCCCCATTT	NA	False	NA	-6	True	AATAAA	-17	NA	87963709	87927906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87950564_87960669_87960825_87962018
ES.3521.39	chr10	-	3800	10	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-23	-613	intron_retention	FALSE	canonical	3	53	junction_3	9.85449699939632	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAAAAATCCCCATTT	NA	False	NA	-6	True	AATAAA	-17	NA	87982763	87927906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.4	chr10	-	7525	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	2	4269	intron_retention	FALSE	canonical	2	6	junction_11	23.4016316447457	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATTGTTATTGCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	87982738	87923024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
ES.3521.41	chr10	-	2875	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	24	-617	intron_retention	FALSE	canonical	0	0	junction_10	31.196794707149	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTTTGAAAAATCCCC	NA	False	NA	-10	True	AATAAA	-13	NA	87982771	87927910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975954_87979801_87979958_87982422
ES.3521.42	chr10	-	1955	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	16	-1259	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	10.555093557141	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTGTTTAGTGACTTG	NA	False	NA	NA	False	NA	NA	NA	87982779	87928552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.43	chr10	-	6299	4	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	15206	-1260	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38.19249489974	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCATTGTTTAGTGACTT	NA	False	NA	NA	False	NA	NA	NA	87967534	87928553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87960669_87960825_87962018
ES.3521.46	chr10	-	3714	7	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-15	14362	combination_of_known_junctions	FALSE	canonical	3	64	junction_6	7.53694603639668	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAAATATGTGGCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	87982755	87947709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.47	chr10	-	1286	7	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-11	1749	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	26.3480971271593	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAATTGAAAAGTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	87982751	87960322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982441_87982713
ES.3521.48	chr10	-	7750	2	NIC	ENSMUSG00000035365.16	novel	825	6	NA	NA	17	-5813	intron_retention	FALSE	canonical	3	12	junction_1	0	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTAGTGGTTGAATAA	NA	False	NA	NA	False	AATAAA	-13	NA	87982778	87974825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87982511_87982713
ES.3521.49	chr10	-	1322	3	ISM	ENSMUSG00000035365.16	ENSMUST00000164121.8	637	5	-9	12757	-9	-5816	5prime_fragment	FALSE	canonical	3	64	junction_2	6	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGGTAGTGGTTGAA	NA	False	NA	NA	False	AATAAA	-10	NA	87982749	87974828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_87975959_87979801_87979958_87982713
ES.3521.5	chr10	-	6410	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-1	3231	intron_retention	TRUE	non_canonical	0	0	junction_1	28.0230129750237	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTTCCACTGGGTG	NA	False	NA	NA	False	AATAAA	-22	NA	87982804	87924062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926022_87926084_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
ES.3521.6	chr10	-	6301	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	2784	3221	intron_retention	FALSE	non_canonical	0	0	junction_1	31.196794707149	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGTGTTCTAAGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	87979956	87924072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926031_87926092_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975954_87979801
ES.3521.7	chr10	-	6559	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-14	3217	intron_retention	FALSE	canonical	3	12	junction_11	22.0262803213204	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTATTGTGTTCTAA	NA	False	NA	NA	False	AATAAA	-8	NA	87982754	87924076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
ES.3521.8	chr10	-	5840	12	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	-13	2710	intron_retention	FALSE	non_canonical	0	0	junction_1	30.2993331077907	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTATACGTTCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	87982753	87924583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_87926031_87926092_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979797_87979958_87982713
ES.35210.1	chr9	-	3303	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	-9	3	-9	-3	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCTGGCAAAGCTACTG	9348	False	NA	NA	False	NA	NA	NA	58220478	58195023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ES.35210.2	chr9	-	2513	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	-80	864	-80	-864	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCTGTGCCCTGTGG	9277	False	NA	NA	False	AATAAA	-21	NA	58220549	58195884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ES.35210.4	chr9	-	179	1	Intergenic	novelGene_28576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGATGGGC	2919	False	NA	NA	False	NA	NA	NA	58201459	58201280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58201300_58201500
ES.35210.5	chr9	-	230	1	Intergenic	novelGene_28577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTTTATTTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	58208018	58207788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58207800_58208000
ES.35210.6	chr9	-	213	2	Intergenic	novelGene_28578	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTCTTCAGCCCAAAAA	1863	False	NA	NA	False	NA	NA	NA	58227963	58207803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58207978_58227924
ES.35211.1	chr9	-	223	1	Intergenic	novelGene_28579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACACTGTAGGCCTAAGA	7738	False	NA	NA	False	AAAAAG	-28	NA	58233322	58233099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58233100_58233300
ES.35212.1	chr9	-	177	1	Intergenic	novelGene_28580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCAAGGGAAATA	350	False	NA	NA	False	NA	NA	NA	58249396	58249219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58249200_58249400
ES.35213.1	chr9	-	1165	8	NIC	ENSMUSG00000036244.6	novel	1283	11	NA	NA	3551	-12	intron_retention	FALSE	canonical	0	0	junction_1	1.29362644830535	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGGACTGTTGGTTTG	5822	False	NA	NA	False	AATACA	-15	NA	58274101	58266998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58267162_58267716_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270407_58271055_58271151_58273902
ES.35214.1	chr9	+	871	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	-28	0	-28	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGCTGATACTTGCT	NA	False	NA	16	True	NA	NA	NA	58362376	58376918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58362640_58374083_58374201_58376427
ES.35214.2	chr9	+	6128	1	NIC	ENSMUSG00000097651.3	novel	843	3	NA	NA	13	-8373	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACCTTGGTCATGATG	NA	False	NA	9	True	NA	NA	NA	58362417	58368545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58362400_58368500
ES.35215.1	chr9	+	556	1	Intergenic	novelGene_28581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAGAGAAATTGCTG	7938	False	NA	NA	False	NA	NA	NA	58378495	58379051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58378500_58379100
ES.35216.1	chr9	+	2690	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	-515	-36	-515	-2	multi-exon	FALSE	canonical	0	0	junction_2	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATCCGGGGCCCACAGG	NA	False	NA	NA	False	AATAAA	-15	NA	58395370	58407061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58396523_58396951_58397676_58406247
ES.35216.2	chr9	+	1967	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-872	0	-513	0	multi-exon	FALSE	canonical	3	17	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGCACATGGCC	NA	False	NA	NA	False	AGTAAA	-26	NA	58395372	58397768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58396523_58396951
ES.35216.4	chr9	+	4954	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-834	-3025	-475	3025	multi-exon	FALSE	canonical	3	17	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACGTCCTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	58395410	58400793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58396523_58396951
ES.35216.5	chr9	+	1367	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-831	559	-472	-559	multi-exon	FALSE	canonical	3	17	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACTTCAAGTCCTGGAA	NA	False	NA	NA	False	NA	NA	NA	58395413	58397209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58396523_58396951
ES.35216.6	chr9	+	2272	3	NNC	ENSMUSG00000066607.6	novel	2139	3	NA	NA	-227	3025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACGTCCTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	58395658	58400793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58396523_58396951_58397676_58400109
ES.35217.1	chr9	-	5563	5	Antisense	novelGene_ENSMUSG00000066607.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGCTCAGCGTTGTTCA	NA	False	NA	0	True	NA	NA	NA	58397235	58362024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_58367043_58367787_58367940_58369989_58370183_58394684_58394788_58397138
ES.35218.1	chr9	-	171	1	Intergenic	novelGene_28582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAATAATGCACTT	NA	False	NA	NA	False	NA	NA	NA	58424824	58424653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58424700_58424800
ES.35219.1	chr9	+	8756	1	Antisense	novelGene_ENSMUSG00000035914.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	58432532	58441288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_58432500_58441300
ES.3522.10	chr10	+	6455	3	NIC	ENSMUSG00000035351.17	novel	1277	10	NA	NA	-5611	0	intron_retention	FALSE	canonical	3	599	junction_1	39	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	88004689	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88010796_88012934_88013029_88013995
ES.3522.2	chr10	+	1266	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	2	-1	2	1	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTCCTATTGTGTTG	NA	False	NA	13	True	AATAAA	-21	NA	87982855	88014253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ES.3522.4	chr10	+	3868	8	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	15	1	intron_retention	FALSE	canonical	3	484	junction_1	66.010512459017	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTCCTATTGTGTTG	NA	False	NA	13	True	AATAAA	-21	NA	87982868	88014253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88010796_88012934_88013029_88013995
ES.3522.5	chr10	+	4830	7	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	17	0	intron_retention	FALSE	canonical	3	484	junction_1	41.4437369614919	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982870	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88010796_88012934
ES.3522.6	chr10	+	1344	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	-67	0	-17	0	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982871	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ES.3522.7	chr10	+	1231	10	NNC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	185.973581025656	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982876	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_87982935_87984034_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ES.3522.8	chr10	+	1059	9	NIC	ENSMUSG00000035351.17	novel	1267	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	186.908901607173	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982877	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010744_88010796_88012934_88013029_88013995
ES.3522.9	chr10	+	1186	9	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	1083	0	1055	0	3prime_fragment	FALSE	canonical	3	491	junction_2	63.2672901268894	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87984021	88014250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ES.35220.1	chr9	-	3458	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	321	-176	321	176	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCTTTGCCAGTGACTC	423	False	NA	NA	False	AGTAAA	-19	NA	58462399	58431404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
ES.35220.10	chr9	-	3323	8	NNC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	227	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.7746639316869	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	329	False	NA	-7	True	AATAAA	-15	NA	58462493	58431584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444600_58444891_58447949_58448224_58462304
ES.35220.2	chr9	-	3587	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	18	-2	18	2	multi-exon	FALSE	canonical	3	53	junction_5	14.4716471567189	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTGTGATGCCTGT	120	False	NA	-1	True	AATAAA	-21	NA	58462702	58431578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
ES.35220.3	chr9	-	4146	8	NIC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	315	0	intron_retention	FALSE	canonical	2	4	junction_5	28.4855853271189	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTGGCCTGTGATGC	417	False	NA	-5	True	AATAAA	-17	NA	58462405	58431582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443896_58444551_58444891_58447949_58448224_58462304
ES.35220.4	chr9	-	3404	10	NNC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	321	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	40.4249037043525	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTGGCCTGTGATGC	423	False	NA	-5	True	AATAAA	-17	NA	58462399	58431582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58443841_58443896_58444551_58444891_58447949_58448224_58460112_58460183_58462304
ES.35220.5	chr9	-	3135	8	NNC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	321	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.2033921598085	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCTGGCCTGTGATGC	423	False	NA	-5	True	AATAAA	-17	NA	58462399	58431582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448079_58462304
ES.35220.6	chr9	-	3438	9	NNC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	231	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	35.5870411807444	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	333	False	NA	-7	True	AATAAA	-15	NA	58462489	58431584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58460112_58460183_58462304
ES.35220.7	chr9	-	3186	8	NNC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	329	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.2818812822635	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	431	False	NA	-7	True	AATAAA	-15	NA	58462391	58431584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444807_58447949_58448224_58462304
ES.35220.8	chr9	-	4792	4	ISM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	7692	2	4222	-2	3prime_fragment	FALSE	canonical	3	66	junction_3	13.6381816969859	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	NA	False	NA	-7	True	AATAAA	-15	NA	58440532	58431584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878
ES.35220.9	chr9	-	3363	9	NIC	ENSMUSG00000035914.12	novel	3603	8	NA	NA	290	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	34.2360829389111	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	392	False	NA	-7	True	AATAAA	-15	NA	58462430	58431584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58443841_58443896_58444551_58444891_58447949_58448224_58462304
ES.35221.1	chr9	+	2067	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-40	-3	12	3	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAATACTCTTTATTC	497	False	NA	NA	False	AATAAA	-19	NA	58489534	58560164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.10	chr9	+	2471	10	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-13	-7	intron_retention	FALSE	canonical	0	0	junction_6	191.178476499169	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	524	False	NA	NA	False	AATAAA	-9	NA	58489561	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58525945_58526294_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58551384_58551478_58557779_58557802_58558540_58558616_58559141
ES.35221.11	chr9	+	2021	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-10	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	144.809836989373	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGTGCTTGGAATAAT	527	False	NA	NA	False	AATAAA	-8	NA	58489564	58560153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551108_58558545_58558616_58559141
ES.35221.12	chr9	+	1780	6	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-8	-7	intron_retention	FALSE	canonical	0	0	junction_4	169.63678846288	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	529	False	NA	NA	False	AATAAA	-9	NA	58489566	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58547951_58548086_58550811_58551086_58557779_58557802_58558521_58558616_58559141
ES.35221.13	chr9	+	1667	9	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-6	272	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	165.522232268055	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGATACTCATTCC	531	False	NA	NA	False	AATAAA	-21	NA	58489568	58559612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58551291_58551478_58557779_58557802_58558540_58558616_58559141
ES.35221.14	chr9	+	2009	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-5	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	144.809836989373	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	532	False	NA	NA	False	AATAAA	-9	NA	58489569	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58558531_58558616_58559141
ES.35221.15	chr9	+	2202	9	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_5	165.522232268055	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	538	False	NA	NA	False	AATAAA	-9	NA	58489575	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58551291_58551478_58557779_58557802_58558540_58558616_58559141
ES.35221.16	chr9	+	1950	8	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	15	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	135.032724680701	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	552	False	NA	NA	False	AATAAA	-9	NA	58489589	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489758_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.17	chr9	+	3527	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	16	-1519	16	-811	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGGCCTTGGTTGTTT	553	False	NA	NA	False	NA	NA	NA	58489590	58561680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.18	chr9	+	1335	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-127	-367	22	272	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGATACTCATTCC	559	False	NA	NA	False	AATAAA	-21	NA	58489596	58559612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
ES.35221.19	chr9	+	2080	9	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-39	6	intron_retention	FALSE	canonical	0	0	junction_5	165.736801887812	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACTCTTTATTCAAA	580	False	NA	NA	False	AATAAA	-22	NA	58489617	58560167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58551384_58551478_58557779_58557802_58558540_58558616_58559141
ES.35221.2	chr9	+	1942	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-184	-917	17	1	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	502	False	NA	NA	False	AATAAA	-17	NA	58489539	58560162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
ES.35221.20	chr9	+	1840	9	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	126.778103393291	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	16	False	NA	NA	False	AATAAA	-9	NA	58489688	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141_58559804_58559866
ES.35221.21	chr9	+	1816	7	NIC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_2	132.640386844363	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATAATACTCTTTAT	16	False	NA	NA	False	AATAAA	-17	NA	58489688	58560162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58489810_58530969_58531139_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.22	chr9	+	1927	8	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_7	133.11649033835	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	17	False	NA	NA	False	AATAAA	-16	NA	58489689	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559123
ES.35221.23	chr9	+	2282	9	NNC	ENSMUSG00000032336.18	novel	594	3	NA	NA	113	-9	intron_retention	FALSE	canonical	0	0	junction_1	182.684666844265	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGGTGCTTGGAATAA	14	False	NA	NA	False	AATAAA	-7	NA	58489839	58560152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489990_58525945_58526294_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557806_58558540_58558616_58559141
ES.35221.24	chr9	+	3990	3	FSM	ENSMUSG00000032336.18	ENSMUST00000177021.2	594	3	-2576	-820	-2576	-1	multi-exon	FALSE	canonical	3	358	junction_2	7	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAATAATACTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	58554905	58560160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58557802_58558540_58558616_58559141
ES.35221.25	chr9	+	11541	1	Genic_Genomic	ENSMUSG00000032336.18	novel	NA	NA	NA	NA	1548	7109	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTTACTTGCACTA	NA	False	NA	NA	False	AATAAA	-17	NA	58560806	58572347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_58560800_58572300
ES.35221.3	chr9	+	9272	6	NIC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	17	-7	intron_retention	FALSE	canonical	3	352	junction_1	29.990665214363	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	502	False	NA	NA	False	AATAAA	-9	NA	58489539	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58557802_58558540
ES.35221.4	chr9	+	2393	9	NIC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	22	-9	intron_retention	FALSE	canonical	2	4	junction_1	162.90852494575	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGGTGCTTGGAATAA	507	False	NA	NA	False	AATAAA	-7	NA	58489544	58560152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_58489810_58525945_58526294_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.5	chr9	+	2111	9	NNC	ENSMUSG00000032336.18	novel	841	8	NA	NA	-26	-7	intron_retention	FALSE	canonical	1	2	junction_6	162.142250431527	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTGCTTGGAATAATA	511	False	NA	NA	False	AATAAA	-9	NA	58489548	58560154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58551291_58551478_58557779_58557802_58558540_58558616_58559141
ES.35221.6	chr9	+	1497	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	-22	549	-22	272	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGATACTCATTCC	515	False	NA	NA	False	AATAAA	-21	NA	58489552	58559612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ES.35221.7	chr9	+	1924	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_5	144.809836989373	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	516	False	NA	NA	False	AATAAA	-16	NA	58489553	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58558521_58558616_58559141
ES.35221.8	chr9	+	2040	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_5	144.809836989373	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTGGAATAATACTCTT	522	False	NA	NA	False	AATAAA	-14	NA	58489559	58560159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551092_58558521_58558616_58559141
ES.35221.9	chr9	+	2032	7	NNC	ENSMUSG00000032336.18	novel	2024	8	NA	NA	-14	0	intron_retention	FALSE	non_canonical	0	0	junction_5	144.809836989373	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	523	False	NA	NA	False	AATAAA	-16	NA	58489560	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551102_58558540_58558616_58559141
ES.35222.1	chr9	-	180	1	Intergenic	novelGene_28583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAATACAAGA	NA	False	NA	NA	False	NA	NA	NA	58497775	58497595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58497600_58497800
ES.35223.1	chr9	-	164	1	Intergenic	novelGene_28584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGGTACAGTA	NA	False	NA	NA	False	NA	NA	NA	58498240	58498076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58498100_58498200
ES.35224.1	chr9	-	2044	1	Intergenic	novelGene_28585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58507650	58505606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58505600_58507600
ES.35224.2	chr9	-	2579	1	Intergenic	novelGene_28586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	58509228	58506649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58506600_58509200
ES.35225.1	chr9	-	175	1	Intergenic	novelGene_28587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATAACTTA	4212	False	NA	NA	False	NA	NA	NA	58521966	58521791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58521800_58522000
ES.35226.1	chr9	-	172	1	Intergenic	novelGene_28588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58535755	58535583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58535600_58535800
ES.35227.1	chr9	-	179	1	Intergenic	novelGene_28589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATTGTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	58542568	58542389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58542400_58542600
ES.35228.1	chr9	-	880	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	-18	21	-18	1	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCAATGTTTTATTG	9032	False	NA	-4	True	AATAAA	-19	NA	58648860	58560159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ES.35228.10	chr9	-	6323	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	577	junction_3	23.8379948821204	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCTTTTATCAATGTT	9044	False	NA	-10	True	AATAAA	-13	NA	58648848	58560165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58560390_58565039_58565127_58567456_58573200_58619298_58619389_58648669
ES.35228.11	chr9	-	864	6	NNC	ENSMUSG00000074269.11	novel	307	3	NA	NA	2	-4561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	293.193042209395	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAACCTAGATTCTA	9052	False	NA	NA	False	AATAAA	-30	NA	58648840	58564724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58564959_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ES.35228.12	chr9	-	181	1	Intergenic	novelGene_28590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	7935	False	NA	NA	False	NA	NA	NA	58574146	58573965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58574000_58574100
ES.35228.13	chr9	-	235	1	Intergenic	novelGene_28591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCATTTCTCTATGGA	NA	False	NA	NA	False	NA	NA	NA	58621330	58621095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58621100_58621300
ES.35228.2	chr9	-	6074	1	NIC	ENSMUSG00000074269.11	novel	516	3	NA	NA	340	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATCAATGTTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	58566235	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58560200_58566200
ES.35228.3	chr9	-	832	6	NNC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	297.891658157794	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATCAATGTTTTAT	9043	False	NA	-6	True	AATAAA	-17	NA	58648849	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58560390_58565039_58565127_58567491_58567655_58573115_58573200_58619298_58619389_58648669
ES.35228.5	chr9	-	783	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	258.205828749081	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATCAATGTTTTAT	9043	False	NA	-6	True	AATAAA	-17	NA	58648849	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58560390_58565039_58565127_58567456_58567655_58619298_58619389_58648669
ES.35228.6	chr9	-	1004	7	NNC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	266.647551398221	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATCAATGTTTTAT	9032	False	NA	-6	True	AATAAA	-17	NA	58648860	58560161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58560390_58565039_58565127_58567456_58567655_58571718_58571845_58573115_58573200_58619298_58619389_58648669
ES.35228.7	chr9	-	902	6	NNC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	290.280829542703	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTATCAATGTTTTA	9043	False	NA	-7	True	AATAAA	-16	NA	58648849	58560162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58560426_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ES.35228.8	chr9	-	3191	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_2	265.629794074385	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCTTTTATCAATGTT	9045	False	NA	-10	True	AATAAA	-13	NA	58648847	58560165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58560390_58565039_58567655_58573115_58573200_58619298_58619389_58648669
ES.35228.9	chr9	-	857	6	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	-41	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	298.943071503589	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCTTTTATCAATGTT	6604	False	NA	-10	True	AATAAA	-13	NA	58651288	58560165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58651114
ES.35229.1	chr9	+	3939	1	Genic_Genomic	ENSMUSG00000032338.10	novel	NA	NA	NA	NA	-712	-36537	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATTGAGTTTGTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	58729982	58733921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_58730000_58733900
ES.35229.2	chr9	+	4281	9	NNC	ENSMUSG00000032338.10	novel	6118	8	NA	NA	-470	-2259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTTTTGGTCACTTGC	NA	False	NA	NA	False	AAAAAG	-33	NA	58730224	58768199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_58731580_58751160_58751585_58760665_58760828_58762807_58763027_58764999_58765147_58765256_58765498_58766311_58766477_58766583_58767223_58767270
ES.35229.3	chr9	+	3560	1	ISM	ENSMUSG00000032338.10	ENSMUST00000034889.10	6118	8	36204	0	36204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCTTACTTGGGGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	58766898	58770458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_58766900_58770500
ES.3523.1	chr10	-	5506	1	FSM	ENSMUSG00000088843.4	ENSMUST00000158218.4	115	1	-2587	-2804	-2587	2804	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAAGCCCTTCTGAGA	NA	False	NA	NA	False	AGTAAA	-36	NA	88003522	87998016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_87998000_88003500
ES.3523.2	chr10	-	1847	1	Intergenic	novelGene_2698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACGTAGACAAAGGCTGC	NA	False	NA	NA	False	TATAAA	-21	NA	88003522	88001675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88001700_88003500
ES.35230.1	chr9	+	2310	1	Intergenic	novelGene_28594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTGAAACCTCGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	58943783	58946093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_58943800_58946100
ES.35231.1	chr9	-	7055	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	175	8	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTCTTCCTGTCC	NA	False	NA	3	True	AATAAA	-27	NA	58943533	58781961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.10	chr9	-	7170	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	-36	-152	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	31.0036946335882	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	-5	True	AATACA	-15	NA	58943760	58782121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.13	chr9	-	6921	28	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-5	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.3333107221912	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	-5	True	AATACA	-15	NA	58943729	58782121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785382_58788038_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.14	chr9	-	7042	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-55	-152	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	30.3888020484656	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	-5	True	AATACA	-15	NA	58943779	58782121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.15	chr9	-	7157	29	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	6	-152	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	37.0186625575671	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACTGGTCTGGTCAAAA	NA	False	NA	-5	True	AATACA	-15	NA	58943702	58782121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.17	chr9	-	6051	25	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	2972	-154	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	32.5663585365839	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58886419	58782123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58886288
ES.35231.18	chr9	-	4829	16	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-20373	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.6613419964552	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58821590	58782123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58794121_58794362_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536
ES.35231.19	chr9	-	6427	4	ISM	ENSMUSG00000032340.9	ENSMUST00000068664.7	7379	29	148463	154	5956	-154	3prime_fragment	FALSE	canonical	3	139	junction_1	12.8322510366134	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58795261	58782123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752
ES.35231.2	chr9	-	7312	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-22	-1876	-6	8	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTCTTCCTGTCC	NA	False	NA	3	True	AATAAA	-27	NA	58943730	58781961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.21	chr9	-	5761	24	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	14614	-154	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	33.9921596653487	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58874777	58782123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58874739
ES.35231.22	chr9	-	8397	27	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	26	-160	intron_retention	FALSE	canonical	0	0	junction_21	32.352098603084	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCAATCAAACTGGTCT	NA	False	NA	-13	True	AATACA	-7	NA	58943682	58782129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865176_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.23	chr9	-	6976	28	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-4	-205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.8172939145348	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCATGTTTTTATTTT	NA	False	NA	-58	True	TTTAAA	-3	NA	58943728	58782174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791851_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.24	chr9	-	5838	26	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	50720	-1373	-3476	-495	3prime_fragment	FALSE	canonical	3	72	junction_21	17.8084923561766	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAATTTTTTAAATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	58892988	58782464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883
ES.35231.25	chr9	-	5648	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	15	-249	15	249	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGACTTTGGTGATTTAG	NA	False	NA	NA	False	TATAAA	-13	NA	58943693	58783588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.26	chr9	-	3973	22	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	26077	167	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	20.6025998403455	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCCTGGCATTTCCAT	6130	False	NA	NA	False	AATGAA	-17	NA	58863314	58783670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241
ES.35231.27	chr9	-	5540	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	-45	17	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	30.3143114055806	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTGCTTTCTGTG	NA	False	NA	1	True	AATGAA	-18	NA	58943769	58783820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.3	chr9	-	7133	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	0	8	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	30.3888020484656	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTCTTCCTGTCC	NA	False	NA	3	True	AATAAA	-27	NA	58943710	58781961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.30	chr9	-	5529	29	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	45	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	39.0669885176313	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGTTTGTTGCTTTCTG	NA	False	NA	-1	True	AATGAA	-16	NA	58943663	58783822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58890507_58890653_58892883_58893160_58897473_58897792_58943248
ES.35231.33	chr9	-	5508	29	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-563	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	30.6116849438583	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACTTGTTTGTTGCTT	NA	False	NA	-5	True	AATGAA	-12	NA	58944287	58783826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248_58943581_58944076
ES.35231.34	chr9	-	5423	28	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	39.3186134136006	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACTTGTTTGTTGCTT	NA	False	NA	-5	True	AATGAA	-12	NA	58943710	58783826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824383_58825884_58825940_58828444_58828584_58829049_58829199_58833044_58833198_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.35	chr9	-	4141	24	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	14589	9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	33.245208020596	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGACTTGTTTGTTGC	NA	False	NA	-7	True	AATGAA	-10	NA	58874802	58783828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58874739
ES.35231.36	chr9	-	4360	25	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	2958	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	32.5663585365839	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGACTTGTTTGTTGC	NA	False	NA	-7	True	AATGAA	-10	NA	58886433	58783828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58886288
ES.35231.37	chr9	-	5191	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	214	3	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	31.0036946335882	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTGAAAAGACTTGTT	NA	False	NA	-13	True	AATGAA	-4	NA	58943494	58783834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.38	chr9	-	5446	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-177	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	30.3888020484656	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAACATTGAAAAGAC	NA	False	NA	-18	True	NA	NA	NA	58943901	58783839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.4	chr9	-	7189	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	-4	-147	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	30.3143114055806	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	0	True	AATACA	-20	NA	58943714	58782116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.40	chr9	-	4296	25	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	2921	-32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	33.2944564955389	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGAGATTACAGATC	NA	False	NA	-48	True	NA	NA	NA	58886470	58783869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58886288
ES.35231.41	chr9	-	5164	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	0	-33	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	31.1069209749917	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTGAGATTACAGAT	NA	False	NA	-49	True	NA	NA	NA	58943710	58783870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.42	chr9	-	5302	28	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	54	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	30.8260752218028	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTGAGATTACAGAT	NA	False	NA	-49	True	NA	NA	NA	58943654	58783870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829074_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.43	chr9	-	5339	29	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	15	-33	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	37.522714209298	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTGAGATTACAGAT	NA	False	NA	-49	True	NA	NA	NA	58943693	58783870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.44	chr9	-	5292	29	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-446	-35	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	30.9745616496466	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACTGTGAGATTACAG	NA	False	NA	-51	True	NA	NA	NA	58944170	58783872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248_58943588_58944076
ES.35231.46	chr9	-	5217	28	NNC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-650	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	31.0638971548514	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACTGTGAGATTACAG	NA	False	NA	-51	True	NA	NA	NA	58944374	58783872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58944076
ES.35231.47	chr9	-	4852	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	265	297	265	-297	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTCTGTGATGTTCTCT	NA	False	NA	NA	False	AAAACA	-15	NA	58943443	58784134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.48	chr9	-	3847	16	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-78	30964	-62	4780	5prime_fragment	FALSE	canonical	3	72	junction_9	19.5680010902153	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAGACTAT	NA	False	NA	NA	False	NA	NA	NA	58943786	58814801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.49	chr9	-	1622	5	ISM	ENSMUSG00000032340.9	ENSMUST00000215026.2	1865	12	60924	-783	-27250	246	3prime_fragment	FALSE	canonical	3	129	junction_2	11.0113577727726	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTATATGGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	58828467	58819335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444
ES.35231.5	chr9	-	5492	3	ISM	ENSMUSG00000032340.9	ENSMUST00000068664.7	7379	29	153019	147	10512	-147	3prime_fragment	FALSE	canonical	3	139	junction_1	14.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	0	True	AATACA	-20	NA	58790705	58782116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58784641_58785310_58785448_58787874
ES.35231.50	chr9	-	3099	15	NNC	ENSMUSG00000032340.9	novel	3639	15	NA	NA	12	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	50.6168077271749	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCATATTTGGCATTT	NA	False	NA	NA	False	NA	NA	NA	58943696	58820110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865337_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897794_58943248
ES.35231.52	chr9	-	166	1	Intergenic	novelGene_28592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAGAAAGAAAA	5388	False	NA	NA	False	NA	NA	NA	58864056	58863890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58863900_58864100
ES.35231.53	chr9	-	3114	3	ISM	ENSMUSG00000032340.9	ENSMUST00000217545.2	3639	15	0	71244	0	-64931	5prime_fragment	FALSE	canonical	3	118	junction_2	5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGTGCTCTACCTGAC	NA	False	NA	NA	False	ATTAAA	-17	NA	58943710	58890825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58893160_58897473_58897792_58943248
ES.35231.54	chr9	-	1146	3	ISM	ENSMUSG00000032340.9	ENSMUST00000217545.2	3639	15	15	73197	13	-66884	5prime_fragment	FALSE	canonical	3	118	junction_2	5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTATGTTCAGTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	58943695	58892778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_58893160_58897473_58897792_58943248
ES.35231.55	chr9	-	180	1	Intergenic	novelGene_28593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAATATTCTTA	NA	False	NA	NA	False	NA	NA	NA	58898852	58898672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_58898700_58898900
ES.35231.6	chr9	-	7309	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	-218	-147	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	0	True	AATACA	-20	NA	58943942	58782116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.7	chr9	-	6929	27	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	3	-147	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	31.1069209749917	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	0	True	AATACA	-20	NA	58943721	58782116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35231.8	chr9	-	7354	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-219	-1721	-203	-147	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTGGTCAAAAAGTTC	NA	False	NA	0	True	AATACA	-20	NA	58943927	58782116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ES.35232.1	chr9	+	179	1	Intergenic	novelGene_28595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59118365	59118544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59118400_59118500
ES.35233.1	chr9	-	1497	3	Intergenic	novelGene_28596	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	59177212	59164296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59165546_59166266_59166325_59177022
ES.35233.2	chr9	-	1334	3	Intergenic	novelGene_28597	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	59168108	59164300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59165546_59166266_59166325_59168077
ES.35234.1	chr9	-	991	1	Intergenic	novelGene_28598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAAATAAAAAAAATAA	NA	False	NA	NA	False	AATAAA	-45	NA	59182509	59181518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59181500_59182500
ES.35234.2	chr9	-	828	2	Intergenic	novelGene_28600	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCAAAAATAAAAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	59182473	59181521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59182170_59182293
ES.35234.3	chr9	-	453	2	Intergenic	novelGene_28599	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCAAAAATAAAAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	59182376	59181521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59181892_59182293
ES.35234.4	chr9	-	731	2	Intergenic	novelGene_28601	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCAAAAATAAAAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	59183910	59181521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59182162_59183819
ES.35235.1	chr9	+	119	1	Intergenic	novelGene_28602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTTCAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	59197562	59197681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59197600_59197700
ES.35236.1	chr9	+	2537	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	-70	-3	-56	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198784	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
ES.35236.11	chr9	+	4288	8	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	285.928277006379	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198853	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59216305_59216374_59217510_59217632_59218572_59220520_59221035_59221135_59222013
ES.35236.12	chr9	+	5163	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	305	junction_5	131.862655820365	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198853	59223483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222013
ES.35236.14	chr9	+	10898	5	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	305	junction_4	145.651982478784	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198853	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59210835_59217510_59220520_59221035_59221135_59222013
ES.35236.16	chr9	+	2260	7	NNC	ENSMUSG00000025236.12	novel	2464	7	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	238.660847228866	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCCAGGATCATGAA	NA	False	NA	8	True	ATTAAA	-15	NA	59198854	59223378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220425_59220520_59221035_59221135_59222016
ES.35236.17	chr9	+	5678	5	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	305	junction_4	143.186067758005	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198854	59223483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59221135_59222013
ES.35236.18	chr9	+	4828	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	243.254096688125	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198856	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59217961_59220520_59221035_59221135_59222013
ES.35236.19	chr9	+	5603	5	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	2	1	intron_retention	FALSE	canonical	2	18	junction_3	254.758096044071	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCTAAGTCTAATTGAT	NA	False	NA	16	True	ATTAAA	-17	NA	59198856	59223480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217580_59221135_59222013
ES.35236.20	chr9	+	2264	6	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	226.796825374607	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198860	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222016
ES.35236.21	chr9	+	6550	4	ISM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	-3	-1	-3	1	intron_retention	FALSE	canonical	3	608	junction_2	18.1903515328563	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGTCTAATTGATTTTG	NA	False	NA	20	True	ATTAAA	-21	NA	59198862	59223484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510
ES.35236.22	chr9	+	2160	5	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	274.837565663793	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198865	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59222016
ES.35236.23	chr9	+	5333	6	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	2	1	intron_retention	FALSE	canonical	2	2	junction_1	250.626734407964	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCTAAGTCTAATTGAT	NA	False	NA	16	True	ATTAAA	-17	NA	59198867	59223480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199340_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222016
ES.35236.24	chr9	+	5074	6	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	3	0	intron_retention	FALSE	canonical	2	18	junction_3	245.553741571983	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198868	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217580_59220520_59221035_59221135_59222016
ES.35236.25	chr9	+	5042	6	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	4	-101	intron_retention	FALSE	canonical	3	305	junction_5	131.862655820365	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCCAGGATCATGAA	NA	False	NA	8	True	ATTAAA	-15	NA	59198869	59223378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222013
ES.35236.26	chr9	+	5649	5	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	5	1	intron_retention	FALSE	canonical	0	0	junction_2	269.514841891871	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCTAAGTCTAATTGAT	NA	False	NA	16	True	ATTAAA	-17	NA	59198870	59223480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210781_59210835_59217510_59221135_59222013
ES.35236.27	chr9	+	2436	6	NNC	ENSMUSG00000025236.12	novel	2464	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	263.381396457685	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATCCTAAGTCTAATTGA	NA	False	NA	15	True	ATTAAA	-16	NA	59198875	59223479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199340_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222016
ES.35236.28	chr9	+	4322	8	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	285.567962531671	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198876	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59211914_59212042_59217510_59217632_59218572_59220520_59221035_59221135_59222016
ES.35236.29	chr9	+	2211	6	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	11	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	243.190131378722	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCCAGGATCATGAA	NA	False	NA	8	True	ATTAAA	-15	NA	59198876	59223378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59217580_59217632_59220322_59220520_59221035_59221135_59222013
ES.35236.3	chr9	+	2415	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	-52	101	-38	-101	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCCAGGATCATGAA	NA	False	NA	8	True	ATTAAA	-15	NA	59198802	59223378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
ES.35236.31	chr9	+	2343	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	239.700333750289	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198878	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220425_59220520_59221035_59221135_59222013
ES.35236.32	chr9	+	2433	6	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	285.88501184917	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198886	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59217580_59217632_59220194_59220520_59221035_59221135_59222013
ES.35236.33	chr9	+	2605	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	239.635660952205	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198888	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220150_59220520_59221035_59221135_59222016
ES.35236.37	chr9	+	4086	7	NNC	ENSMUSG00000025236.12	novel	2464	7	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	274.796086014501	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198889	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210810_59217580_59217632_59218572_59220520_59221035_59221135_59222016
ES.35236.39	chr9	+	5249	7	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	24	-1	intron_retention	FALSE	canonical	0	0	junction_3	281.937936432826	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59198889	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59211914_59212042_59217510_59220520_59221035_59221135_59222016
ES.35236.4	chr9	+	2508	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	242.241213577615	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198828	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220307_59220520_59221035_59221135_59222016
ES.35236.42	chr9	+	5165	6	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_2	257.13467288563	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198894	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205082_59210771_59210835_59217510_59220520_59221035_59221135_59222016
ES.35236.45	chr9	+	5648	6	NNC	ENSMUSG00000025236.12	novel	2464	7	NA	NA	39	1399	intron_retention	FALSE	non_canonical	0	0	junction_5	254.143266682397	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAGTACTTCAAAATTA	NA	False	NA	NA	False	NA	NA	NA	59198904	59232734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59221135_59222016_59223480_59232707
ES.35236.47	chr9	+	6641	1	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-2090	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTAAGTCTAATTGATT	NA	False	NA	17	True	ATTAAA	-18	NA	59216840	59223481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59216800_59223500
ES.35236.48	chr9	+	5124	2	NIC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-1451	0	intron_retention	FALSE	canonical	3	305	junction_1	0	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59217479	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59221135_59222013
ES.35236.49	chr9	+	2855	3	ISM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	20260	105	195	-101	3prime_fragment	FALSE	canonical	3	314	junction_2	158	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCCCAGGATCATGAA	NA	False	NA	8	True	ATTAAA	-15	NA	59219125	59223378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59220520_59221035_59221135_59222016
ES.35236.7	chr9	+	4240	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	231.690646240964	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198835	59223483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59218572_59220520_59221035_59221135_59222013
ES.35236.8	chr9	+	4272	7	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_4	240.022684113166	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198835	59223482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59218539_59220520_59221035_59221135_59222013
ES.35237.1	chr9	+	2757	1	Antisense	novelGene_ENSMUSG00000025235.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTGTTGTCAAATCATA	NA	False	NA	NA	False	NA	NA	NA	59240119	59242876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_59240100_59242900
ES.35238.1	chr9	-	5001	1	Intergenic	novelGene_28603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATCTCTAGCTCGGAG	NA	False	NA	NA	False	NA	NA	NA	59217321	59212320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59212300_59217300
ES.35238.2	chr9	-	1310	1	Intergenic	novelGene_28604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCCCTAGAAATC	NA	False	NA	NA	False	CATAAA	-12	NA	59217321	59216011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59216000_59217300
ES.35239.1	chr9	-	2482	16	NNC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4821088145902	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	-18	True	AATAAA	-2	NA	59260729	59229272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59230283_59230670_59230882_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.10	chr9	-	2443	16	NNC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	-5	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.2970469161055	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260737	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59230257_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.11	chr9	-	2364	15	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	3	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	35.0032797297158	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260729	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59253082_59253135_59260692
ES.35239.12	chr9	-	4064	1	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	-2633	-3196	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59237429	59233365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59233400_59237400
ES.35239.13	chr9	-	196	1	ISM	ENSMUSG00000025235.9	ENSMUST00000214225.2	3757	2	11118	1	11108	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	59249614	59249418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_59249400_59249600
ES.35239.2	chr9	-	2463	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	55	0	-4	0	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	-18	True	AATAAA	-2	NA	59260736	59229272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.3	chr9	-	3053	15	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	-5	-12	intron_retention	FALSE	canonical	3	108	junction_2	13.5405664126546	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260727	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59230266_59230670_59230873_59231319_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.4	chr9	-	4220	15	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	108	junction_2	13.2549567163013	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260736	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.5	chr9	-	2435	16	NNC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	-3	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	34.3767363197846	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260735	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260707
ES.35239.7	chr9	-	2392	15	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	3	-12	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	34.4911257441975	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260729	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59260692
ES.35239.8	chr9	-	3296	14	NIC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	3	-12	intron_retention	FALSE	canonical	3	110	junction_5	13.1666604249355	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260729	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ES.35239.9	chr9	-	3972	15	NNC	ENSMUSG00000025235.9	novel	2518	16	NA	NA	4	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	46.1807120264002	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	False	NA	-30	True	ATTAAA	-9	NA	59260728	59229284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251606_59251681_59253135_59260692
ES.3524.1	chr10	+	904	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	39	109	-14	42	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACATAAATTGCTACAA	NA	False	NA	56	True	AATAAA	-19	NA	88036993	88081911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ES.3524.2	chr10	+	577	4	NIC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	188.816195162268	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTTTGTTGACCAAA	NA	False	NA	14	True	AATAAA	-17	NA	88036993	88081869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88037155_88037673_88037773_88070255_88070321_88081617
ES.3524.3	chr10	+	797	6	NIC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	154.017401614233	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGTTTGTTGACCAAA	NA	False	NA	14	True	AATAAA	-17	NA	88036993	88081869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88081617
ES.3524.4	chr10	+	1007	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	39	6	-14	-6	multi-exon	FALSE	canonical	3	318	junction_4	34.2377309736236	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGAGAATGTGTCT	NA	False	NA	NA	False	AATATA	-11	NA	88036993	88082014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ES.3524.5	chr10	+	713	6	NIC	ENSMUSG00000020056.17	novel	838	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	157.057441721174	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTTTGTTGACCAA	NA	False	NA	13	True	AATAAA	-16	NA	88037030	88081868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88037155_88037673_88037773_88049508_88049575_88055114_88055223_88070255_88070321_88081617
ES.3524.7	chr10	+	895	7	NNC	ENSMUSG00000020056.17	novel	1052	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	142.676790918028	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTTTGTTGACCAA	NA	False	NA	13	True	AATAAA	-16	NA	88037053	88081868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88037155_88037673_88037773_88049508_88049575_88051734_88051937_88055111_88055223_88070255_88070321_88081617
ES.3524.8	chr10	+	3055	6	NIC	ENSMUSG00000020056.17	novel	838	7	NA	NA	8	2	intron_retention	FALSE	canonical	3	113	junction_3	112.605506082074	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGTTGACCAAATA	NA	False	NA	16	True	AATAAA	-19	NA	88037053	88081871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88037155_88037673_88037773_88049508_88051937_88055114_88055223_88070255_88070321_88081617
ES.3524.9	chr10	+	803	6	FSM	ENSMUSG00000020056.17	ENSMUST00000171151.9	837	6	30	4	17	-4	multi-exon	FALSE	canonical	1	1	junction_5	153.628903530553	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCGTTTTCTGATTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	88037062	88061220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88060893
ES.35240.1	chr9	+	203	1	Intergenic	novelGene_28605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAATACCGTCTCTCT	8098	False	NA	NA	False	AATAAA	-17	NA	59323264	59323467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59323300_59323500
ES.35241.1	chr9	+	1828	1	Intergenic	novelGene_28606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAACCAAAACAGACAAAC	3102	False	NA	NA	False	ATTAAA	-12	NA	59358974	59360802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59359000_59360800
ES.35242.1	chr9	+	4916	1	Intergenic	novelGene_28608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAACTTGGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	59367501	59372417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59367500_59372400
ES.35243.1	chr9	+	157	1	Intergenic	novelGene_28609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	59372427	59372584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59372400_59372600
ES.35244.1	chr9	+	4025	1	Intergenic	novelGene_28610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAATTATACCTAAAA	NA	False	NA	NA	False	NA	NA	NA	59384779	59388804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59384800_59388800
ES.35245.1	chr9	-	6732	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-57	296	-53	-296	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTATTTGTGTCGG	NA	False	NA	NA	False	AATAAA	-17	NA	59393954	59295836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.10	chr9	-	4677	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1847	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	106.041217438873	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTACTTATGTTTATT	NA	False	NA	-4	True	AATAAA	-24	NA	59393953	59297387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261_59393423_59393925
ES.35245.11	chr9	-	5149	14	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-84	-1847	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	105.789620412318	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTACTTATGTTTATT	NA	False	NA	-4	True	AATAAA	-24	NA	59393985	59297387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303832_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.12	chr9	-	4868	11	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-36	-1849	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	122.724121508365	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTAGTTACTTATGTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	59393937	59297389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59361684_59361753_59393261
ES.35245.13	chr9	-	5015	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-36	-1851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	106.041217438873	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393937	59297391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261_59393313_59393457
ES.35245.14	chr9	-	5251	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-51	-1851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.987093109388	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393952	59297391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59301225_59301302_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.15	chr9	-	5336	16	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1851	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	157.295249628066	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393953	59297391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59375079_59375148_59384603_59384696_59393261
ES.35245.17	chr9	-	4854	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	106.041217438873	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATTAGTTACTTATGT	NA	False	NA	-9	True	AATAAA	-19	NA	59393953	59297392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261_59393416_59393736
ES.35245.18	chr9	-	4369	5	NNC	ENSMUSG00000025234.12	novel	2005	12	NA	NA	34216	-1852	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	208.327116573911	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATTAGTTACTTATGT	NA	False	NA	-9	True	AATAAA	-19	NA	59359123	59297392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59304276_59306143_59306461_59359095
ES.35245.19	chr9	-	4595	7	NNC	ENSMUSG00000025234.12	novel	2005	12	NA	NA	-45	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	156.078416900679	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCATTAGTTACTTATG	NA	False	NA	-10	True	AATAAA	-18	NA	59393946	59297393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313143_59361677_59361753_59393261
ES.35245.2	chr9	-	5151	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-83	-1839	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTTTATTTTTATAGT	NA	False	NA	4	True	AATAAA	-32	NA	59393984	59297379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
ES.35245.20	chr9	-	5585	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-37	-1854	intron_retention	FALSE	canonical	3	328	junction_11	38.1757631081409	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCATTAGTTACTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	59393938	59297394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.21	chr9	-	4673	11	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-117	-1854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	157.298951045454	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCATTAGTTACTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	59393747	59297394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59375079_59375148_59393261
ES.35245.22	chr9	-	5002	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-26	-1854	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	113.990831746339	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCATTAGTTACTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	59393927	59297394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59361684_59361753_59393261
ES.35245.23	chr9	-	4699	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-19	-1854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	106.041217438873	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCATTAGTTACTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	59393920	59297394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261_59393375_59393815
ES.35245.24	chr9	-	5052	12	FSM	ENSMUSG00000025234.12	ENSMUST00000026264.12	2005	12	-46	-3001	-46	-1854	multi-exon	FALSE	canonical	0	0	junction_5	118.124811425797	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCCATTAGTTACTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	59393947	59297394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.25	chr9	-	4867	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-87	2191	-83	-2191	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGACTTGATTTGAAA	NA	False	NA	NA	False	AATAAA	-43	NA	59393984	59297731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.26	chr9	-	4386	9	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-31	-2191	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	136.612362178538	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGACTTGATTTGAAA	NA	False	NA	NA	False	AATAAA	-43	NA	59393932	59297731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59393261
ES.35245.27	chr9	-	4742	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-36	-2201	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGATCCAAGACTGACT	NA	False	NA	NA	False	AATAAA	-33	NA	59393937	59297741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
ES.35245.28	chr9	-	4360	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-27	-2203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	106.041217438873	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAGATCCAAGACTGA	NA	False	NA	NA	False	AATAAA	-31	NA	59393928	59297743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261_59393375_59393813
ES.35245.3	chr9	-	5223	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-95	1843	-91	-1843	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTATGTTTATTTTTA	NA	False	NA	0	True	AATAAA	-28	NA	59393992	59297383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.30	chr9	-	4234	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-85	2822	-81	2033	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTCTGAGTGTCATAA	NA	False	NA	NA	False	AAAAAG	-17	NA	59393982	59298362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.31	chr9	-	3490	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-85	3566	-81	1289	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTGGTGGTTTTATTA	NA	False	NA	NA	False	AGTAAA	-1	NA	59393982	59299106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.32	chr9	-	3393	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	1289	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTGGTGGTTTTATTA	NA	False	NA	NA	False	AGTAAA	-1	NA	59393953	59299106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
ES.35245.33	chr9	-	3309	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-96	3758	-92	1097	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGTGTGTGTTGCGGTG	NA	False	NA	-1	True	ATTAAA	-18	NA	59393993	59299298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.34	chr9	-	3200	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	1096	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTGTGTGTGTTGCGGT	NA	False	NA	-2	True	ATTAAA	-17	NA	59393953	59299299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
ES.35245.35	chr9	-	3337	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-53	1096	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	137.103509980524	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTGTGTGTGTTGCGGT	NA	False	NA	-2	True	ATTAAA	-17	NA	59393954	59299299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59375079_59375148_59393261
ES.35245.36	chr9	-	5203	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-4	1059	intron_retention	FALSE	canonical	3	295	junction_5	45.547517922373	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAGATTGTGAATTAA	NA	False	NA	-6	True	AATAAA	-14	NA	59393905	59299336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.37	chr9	-	3086	13	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	1059	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	147.366889089782	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAGATTGTGAATTAA	NA	False	NA	-6	True	AATAAA	-14	NA	59393953	59299336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59375079_59375148_59393261
ES.35245.39	chr9	-	2850	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-209	4330	-205	525	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGCTGTGCATTTTCT	NA	False	NA	-2	True	AAAAAG	-15	NA	59394106	59299870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.42	chr9	-	2543	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-73	4501	-69	354	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACACAAAA	NA	False	NA	NA	False	NA	NA	NA	59393970	59300041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.43	chr9	-	2374	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-46	140	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	137.103509980524	461	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTCCTTGACACTGCT	NA	False	NA	NA	False	NA	NA	NA	59393947	59300255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59375079_59375148_59393261
ES.35245.44	chr9	-	2051	14	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-36	9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	108.669250099372	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTCTAGGCCGCCA	NA	False	NA	NA	False	AATAAA	-23	NA	59393937	59300386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303747_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.45	chr9	-	2179	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-56	4848	-52	7	multi-exon	FALSE	canonical	3	295	junction_6	43.7741649239926	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGTATTCTAGGCCGC	NA	False	NA	NA	False	AATAAA	-21	NA	59393953	59300388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.46	chr9	-	2130	14	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-49	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	109.841144035725	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGTATTCTAGGCCGC	NA	False	NA	NA	False	AATAAA	-21	NA	59393950	59300388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313128_59315193_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.47	chr9	-	2105	14	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-51	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	105.789620412318	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATTGTACAACAGTAT	NA	False	NA	NA	False	AATAAA	-11	NA	59393952	59300398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303832_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.48	chr9	-	3112	9	ISM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-4	17797	0	-11085	5prime_fragment	FALSE	canonical	3	295	junction_1	34.4855042010408	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CACAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59393901	59313337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.49	chr9	-	6791	1	Intergenic	novelGene_28607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCATCCCTTTCCC	6062	False	NA	NA	False	NA	NA	NA	59369713	59362922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59362900_59369700
ES.35245.5	chr9	-	4951	12	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-33	-1844	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	118.998715181619	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTTATGTTTATTTTT	NA	False	NA	-1	True	AATAAA	-27	NA	59393934	59297384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59393261
ES.35245.50	chr9	-	3544	2	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-33	-32750	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTTTGCCATATTTA	NA	False	NA	NA	False	NA	NA	NA	59393934	59376656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59379528_59393261
ES.35245.51	chr9	-	142	1	FSM	ENSMUSG00000090516.2	ENSMUST00000171632.2	475	1	383	-50	383	50	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	59379133	59378991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59379000_59379100
ES.35245.52	chr9	-	2912	1	Genic_Genomic	ENSMUSG00000025234.12	novel	NA	NA	NA	NA	-82	-47165	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCACAAGTAAAGAGAAAC	NA	False	NA	NA	False	AAGAAA	-8	NA	59393983	59391071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_59391100_59394000
ES.35245.53	chr9	-	1978	1	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-112	-47858	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGTAGAAGTCAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	59393742	59391764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59391800_59393700
ES.35245.6	chr9	-	5249	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1846	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	137.103509980524	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACTTATGTTTATTT	NA	False	NA	-3	True	AATAAA	-25	NA	59393953	59297386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59375079_59375148_59393261
ES.35245.7	chr9	-	5213	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-45	-1846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.334761567106	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACTTATGTTTATTT	NA	False	NA	-3	True	AATAAA	-25	NA	59393946	59297386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303895_59307390_59307430_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35245.8	chr9	-	4486	15	NNC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-8	-1846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.041217438873	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTACTTATGTTTATTT	NA	False	NA	-3	True	AATAAA	-25	NA	59393347	59297386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59300662_59302160_59302274_59303633_59303742_59303830_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ES.35246.1	chr9	+	167	1	Intergenic	novelGene_28612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCTGCTGCTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	59419134	59419301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59419100_59419300
ES.35247.1	chr9	+	158	1	Intergenic	novelGene_28614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	59429831	59429989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59429800_59430000
ES.35248.1	chr9	+	179	1	Intergenic	novelGene_28615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	59431041	59431220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59431000_59431200
ES.35249.10	chr9	+	3810	11	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	146	-2	intron_retention	FALSE	canonical	3	32	junction_8	377.356330276835	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446968	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59471271_59472103
ES.35249.12	chr9	+	4967	10	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	152	0	intron_retention	FALSE	canonical	3	32	junction_7	399.421464336657	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446974	59472392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59468361_59469225_59469310_59470149_59470334_59470506_59471271_59472103
ES.35249.13	chr9	+	5208	10	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	154	-5	intron_retention	FALSE	canonical	3	1112	junction_7	73.7473163353533	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446976	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59469310_59469578_59470334_59470506_59471271_59472103
ES.35249.14	chr9	+	4183	9	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	154	0	154	0	intron_retention	FALSE	canonical	3	1100	junction_8	81.8183009784486	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446976	59472392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225
ES.35249.15	chr9	+	1796	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	155	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	345.571441675633	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446977	59472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469610_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.16	chr9	+	1877	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	158	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	343.212098240575	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446980	59472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469183_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.17	chr9	+	2466	13	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	160	-3	intron_retention	FALSE	canonical	0	0	junction_9	359.373094197845	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446982	59472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469443_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.18	chr9	+	2621	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	162	-5	intron_retention	FALSE	canonical	3	32	junction_8	365.68895693354	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446984	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.19	chr9	+	2393	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	166	-5	intron_retention	FALSE	canonical	3	1100	junction_8	85.3388670080768	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446988	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59471271_59472103
ES.35249.2	chr9	+	1963	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	36	-3	36	3	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTGCTTGTGTAAA	NA	False	NA	35	True	AATAAA	-27	NA	59446858	59472395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.20	chr9	+	2325	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	167	-2	intron_retention	FALSE	canonical	3	1100	junction_8	86.9189836699798	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446989	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.21	chr9	+	1807	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	168	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	463.704175234791	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAATGAGTTTGGGTTGC	NA	False	NA	26	True	AATAAA	-18	NA	59446990	59472386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464672_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469583_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.22	chr9	+	1779	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	168	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	341.265622136293	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446990	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464184_59464596_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.23	chr9	+	2524	11	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	168	-5	intron_retention	FALSE	canonical	2	3	junction_2	384.934812663131	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446990	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.24	chr9	+	2891	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	169	-2	intron_retention	FALSE	canonical	3	1100	junction_8	88.2538599816059	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446991	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59470334_59470506_59471271_59472103
ES.35249.25	chr9	+	6082	9	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	169	-5	intron_retention	FALSE	canonical	3	1236	junction_1	45.2629470428075	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446991	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.26	chr9	+	3153	11	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	169	-2	intron_retention	FALSE	canonical	3	32	junction_9	374.842486919506	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446991	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506
ES.35249.27	chr9	+	2489	11	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	170	-5	intron_retention	FALSE	canonical	3	32	junction_9	377.657000464707	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446992	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59471271_59472103
ES.35249.28	chr9	+	4326	11	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	170	-7	intron_retention	FALSE	canonical	3	32	junction_7	376.415940151317	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAATGAGTTTGGGTTG	NA	False	NA	25	True	AATAAA	-17	NA	59446992	59472385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.29	chr9	+	1994	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	173	-2	intron_retention	FALSE	canonical	3	1100	junction_8	87.0220278626816	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446995	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470598_59471165_59471271_59472103
ES.35249.3	chr9	+	2656	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	105	-2	intron_retention	FALSE	canonical	3	1100	junction_8	78.2026399334574	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446927	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.30	chr9	+	2313	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	173	-5	intron_retention	FALSE	canonical	3	32	junction_9	362.946140393373	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446995	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59471271_59472103
ES.35249.31	chr9	+	10615	8	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	10390	-2	intron_retention	FALSE	canonical	3	32	junction_5	443.49930400516	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59457212	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59461509_59462621_59464202_59464570_59464682_59465316_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165
ES.35249.32	chr9	+	1352	10	ISM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	17747	2	17747	-2	3prime_fragment	FALSE	canonical	3	1100	junction_4	85.3035248862829	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59464569	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.33	chr9	+	1278	9	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	17747	-3	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	410.043423767532	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59464569	59472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.34	chr9	+	2671	5	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	20454	-6	intron_retention	FALSE	canonical	3	1100	junction_1	99.8436277385793	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAATGAGTTTGGGTTGC	NA	False	NA	26	True	AATAAA	-18	NA	59467276	59472386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59468361_59469225_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.4	chr9	+	1628	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	112	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	497.897098466297	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	False	NA	30	True	AATAAA	-22	NA	59446934	59472390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.5	chr9	+	1788	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	142	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	352.088609427924	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446964	59472392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.6	chr9	+	1776	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	142	-5	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	350.727685993311	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446964	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.7	chr9	+	1844	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	142	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	344.697758012289	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGAGTTTGGGTTGCTT	NA	False	NA	28	True	AATAAA	-20	NA	59446964	59472388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466612_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.8	chr9	+	1830	14	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	142	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	345.571441675633	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGAGTTTGGGTTGCTTG	NA	False	NA	29	True	AATAAA	-21	NA	59446964	59472389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469631_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ES.35249.9	chr9	+	5556	10	NNC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	144	-5	intron_retention	FALSE	canonical	3	5	junction_6	410.135478971414	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGAGTTTGGGTTGCT	NA	False	NA	27	True	AATAAA	-19	NA	59446966	59472387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59447260_59461415_59461509_59462621_59464202_59464570_59464682_59465316_59465419_59466606_59468396_59469225_59470334_59470506_59470598_59471165_59471271_59472103
ES.3525.1	chr10	-	212	1	Intergenic	novelGene_2699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTTAAAAAGAA	NA	False	NA	NA	False	AAAAAG	-17	NA	88074305	88074093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88074100_88074300
ES.35250.1	chr9	+	3380	10	NIC	ENSMUSG00000032297.12	novel	2973	13	NA	NA	-31	135	intron_retention	TRUE	canonical	0	0	junction_4	0.87488976377909	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGTCATGGATCTAC	NA	False	NA	NA	False	NA	NA	NA	59485588	59514710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59485923_59489558_59489642_59497917_59497967_59509859_59509989_59510082_59510163_59510277_59511154_59511412_59511494_59511582_59511727_59512239_59512396_59513262
ES.35250.2	chr9	+	185	1	Intergenic	novelGene_28617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCAGAGCTGGAAG	4476	False	NA	NA	False	NA	NA	NA	59491232	59491417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59491200_59491400
ES.35250.3	chr9	+	3296	10	NNC	ENSMUSG00000032297.12	novel	2610	11	NA	NA	1233	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.03040205505508	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGCCTGCTTCTGTG	NA	False	NA	NA	False	TATAAA	-17	NA	59497854	59514574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59497967_59509001_59509989_59510082_59510163_59510277_59510422_59510517_59510651_59510730_59510881_59511415_59511494_59511582_59511727_59512239_59512396_59513262
ES.35251.1	chr9	-	311	3	Fusion	ENSMUSG00000111852.2_ENSMUSG00000049526.9	novel	1480	3	NA	NA	58	-1079	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGTGTATGCTGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	59447072	59407722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_59407763_59427371_59427522_59446951
ES.35251.2	chr9	-	216	1	Intergenic	novelGene_28611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAAAAAACCAAGA	NA	False	NA	NA	False	NA	NA	NA	59415096	59414880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59414900_59415100
ES.35251.3	chr9	-	160	2	Antisense	novelGene_ENSMUSG00000032297.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	59512727	59422707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59422746_59512605
ES.35251.4	chr9	-	179	1	Intergenic	novelGene_28613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTTCTTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	59429802	59429623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59429600_59429800
ES.35251.5	chr9	-	210	1	Intergenic	novelGene_28616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGCAGGTACAAGGCTC	6549	False	NA	NA	False	NA	NA	NA	59480114	59479904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59479900_59480100
ES.35251.6	chr9	-	235	1	Intergenic	novelGene_28618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGGATTTCTCAGAGG	NA	False	NA	NA	False	NA	NA	NA	59512727	59512492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59512500_59512700
ES.35252.1	chr9	+	2539	22	NIC	ENSMUSG00000025237.17	novel	2484	23	NA	NA	-37	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	16.9245357188034	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGATCACTGTGGTC	NA	False	NA	25	True	AATAAA	-19	NA	59524529	59557564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.10	chr9	+	2450	22	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	1	-19	combination_of_known_junctions	FALSE	canonical	3	4	junction_18	14.7021833416448	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-8	True	NA	NA	NA	59524645	59557531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.11	chr9	+	4208	22	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	1	-4	intron_retention	FALSE	canonical	2	3	junction_8	18.4310937119722	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGATATGATCACTG	NA	False	NA	20	True	AATAAA	-14	NA	59524663	59557559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535354_59535415_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.12	chr9	+	2441	23	FSM	ENSMUSG00000025237.17	ENSMUST00000216351.2	2484	23	24	19	5	-19	multi-exon	FALSE	canonical	0	0	junction_10	14.9016056597828	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-8	True	NA	NA	NA	59524667	59557531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.13	chr9	+	157	1	Genic_Genomic	ENSMUSG00000025237.17	novel	NA	NA	NA	NA	-127	-3277	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	59528711	59528868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_59528700_59528900
ES.35252.14	chr9	+	2664	21	ISM	ENSMUSG00000025237.17	ENSMUST00000216351.2	2484	23	4536	-16	341	-2	3prime_fragment	FALSE	canonical	0	0	junction_8	14.9345237620756	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	27	True	AATAAA	-21	NA	59529179	59557566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.15	chr9	+	2026	19	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-1376	-19	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.4108112762261	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-8	True	NA	NA	NA	59531226	59557531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59531296_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540174_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544378_59544504_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.16	chr9	+	1626	15	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.4795805677289	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	27	True	AATAAA	-21	NA	59537901	59557566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549405_59549497_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.17	chr9	+	5897	4	ISM	ENSMUSG00000025237.17	ENSMUST00000214956.2	514	5	5889	-144	-4677	1	3prime_fragment	FALSE	canonical	3	52	junction_2	6.59966329107444	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGATCACTGTGGTC	5971	False	NA	25	True	AATAAA	-19	NA	59550802	59557564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.18	chr9	+	2756	2	ISM	ENSMUSG00000025237.17	ENSMUST00000217284.2	791	3	-1054	-746	-1054	-2	intron_retention	FALSE	canonical	3	68	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGATATGATCACTGTG	250	False	NA	22	True	AATAAA	-16	NA	59554425	59557561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59556193_59556572
ES.35252.2	chr9	+	2658	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-21	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.3533546820621	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	27	True	AATAAA	-21	NA	59524545	59557566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.3	chr9	+	2502	23	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_18	16.1004722480917	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTGTGGACTGGATA	NA	False	NA	11	True	AATAAA	-5	NA	59524548	59557550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59524692_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.4	chr9	+	2585	23	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	17.5308464859058	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATATGATCACTGTGG	NA	False	NA	23	True	AATAAA	-17	NA	59524591	59557562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.5	chr9	+	2632	24	NNC	ENSMUSG00000025237.17	novel	2631	24	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.0956389048557	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	27	True	AATAAA	-21	NA	59524614	59557566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.6	chr9	+	3624	22	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	26	junction_18	11.7937682918371	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGATCACTGTGGTCTG	NA	False	NA	27	True	AATAAA	-21	NA	59524638	59557566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.8	chr9	+	2634	24	NNC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-3	-19	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	16.2122033898037	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-8	True	NA	NA	NA	59524640	59557531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547319_59547433_59548306_59548380_59548990_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ES.35252.9	chr9	+	3329	20	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	22	junction_1	11.3070958036299	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGGATATGATCACTGT	NA	False	NA	21	True	AATAAA	-15	NA	59524640	59557560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547433_59548306_59548380_59556112_59556887_59557206
ES.35253.1	chr9	+	2719	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	-287	0	-287	0	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1377	False	NA	20	True	AATAAA	-20	NA	59563363	59586658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.10	chr9	+	2322	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-46	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5152.78127228393	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1823	False	NA	14	True	AATAAA	-14	NA	59563809	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573293_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.100	chr9	+	2567	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	718	3	NA	NA	264	-6	multi-exon	FALSE	canonical	3	9	junction_1	5310.89104011747	8081	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	2800	False	NA	14	True	AATAAA	-14	NA	59564786	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59565210_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.101	chr9	+	2217	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	1017	6	NA	NA	230	-10	multi-exon	FALSE	canonical	2	37	junction_1	5302.74464404991	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTTGTGTTTT	886	False	NA	10	True	AATAAA	-10	NA	59565755	59586648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59565833_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.102	chr9	+	5336	10	ISM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	5642	4	-2792	-4	3prime_fragment	FALSE	canonical	3	15664	junction_4	1364.15338010227	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	2785	False	NA	16	True	AATAAA	-16	NA	59569292	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.103	chr9	+	6741	9	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1890	-6	intron_retention	FALSE	canonical	3	15664	junction_4	1342.30910537588	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	3687	False	NA	14	True	AATAAA	-14	NA	59570194	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59585509_59586010
ES.35253.104	chr9	+	7789	9	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1752	-5	intron_retention	FALSE	canonical	3	15664	junction_4	1446.86596109488	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	3825	False	NA	15	True	AATAAA	-15	NA	59570332	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59583018_59585326_59585509_59586010
ES.35253.105	chr9	+	8258	8	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	90	-3	intron_retention	FALSE	canonical	3	15664	junction_4	1433.66736813285	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	5667	False	NA	17	True	AATAAA	-17	NA	59572174	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59585509_59586010
ES.35253.106	chr9	+	8361	6	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	676	-5	intron_retention	FALSE	canonical	3	15664	junction_3	1690.0039526581	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	6253	False	NA	15	True	AATAAA	-15	NA	59572760	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59585509_59586010
ES.35253.107	chr9	+	5381	7	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-3039	-6	intron_retention	FALSE	canonical	3	15664	junction_2	777.460699256811	8080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	9322	False	NA	14	True	AATAAA	-14	NA	59575829	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59583018_59585326_59585509_59586010
ES.35253.108	chr9	+	1565	6	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1121	-6	at_least_one_novel_splicesite	FALSE	canonical	1	155	junction_4	6820.4125388425	8080	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	NA	False	NA	14	True	AATAAA	-14	NA	59577747	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585329_59585509_59586010
ES.35253.109	chr9	+	5135	4	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-359	-8	intron_retention	FALSE	canonical	3	15738	junction_2	885.963254818668	8079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTTGTGTTTTGT	201	False	NA	12	True	AATAAA	-12	NA	59578509	59586650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59579009_59579203_59583018_59585326_59585509_59586010
ES.35253.11	chr9	+	2305	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-40	8810	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5133.0922325406	8113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCCAGGCTTCTCCAT	1829	False	NA	NA	False	NA	NA	NA	59563815	59595468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010_59586657_59595428
ES.35253.110	chr9	+	7263	3	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-173	-3	intron_retention	FALSE	canonical	3	17223	junction_1	314	8079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	387	False	NA	17	True	AATAAA	-17	NA	59578695	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59579009_59579203_59585509_59586010
ES.35253.111	chr9	+	1943	1	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	5844	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8077	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	6404	False	NA	17	True	AATAAA	-17	NA	59584712	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59584700_59586700
ES.35253.112	chr9	+	3530	15	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	-9	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	15.5433889089706	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	1627	False	NA	NA	False	AATAAA	-18	NA	59587417	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625225_59625281_59625422_59625505_59625744_59625803
ES.35253.113	chr9	+	3316	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	-9	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	13.6750106822541	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	1627	False	NA	NA	False	AATAAA	-18	NA	59587417	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.114	chr9	+	3597	13	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	-6	-1	intron_retention	TRUE	non_canonical	0	0	junction_11	14.6995370297465	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	1630	False	NA	NA	False	AATAAA	-19	NA	59587420	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621557_59623205_59623311_59623490_59625216_59625495_59625714_59625801
ES.35253.115	chr9	+	1419	12	NIC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	1	179	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.71251452435445	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGCTGCTTGCTATCA	1637	False	NA	NA	False	NA	NA	NA	59587427	59623886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490
ES.35253.116	chr9	+	3436	13	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	15.569512587818	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	1637	False	NA	NA	False	AATAAA	-19	NA	59587427	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625331_59625498_59625714_59625773
ES.35253.117	chr9	+	3485	15	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	15.0983172464175	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	1639	False	NA	NA	False	AATAAA	-18	NA	59587429	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625225_59625281_59625422_59625505_59625744_59625803
ES.35253.118	chr9	+	3312	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.6026852490925	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTGTGGTGTAGAAG	1642	False	NA	NA	False	AATAAA	-16	NA	59587432	59626153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617804_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.119	chr9	+	3534	13	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	14.0593978059754	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	1646	False	NA	NA	False	AATAAA	-19	NA	59587436	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.12	chr9	+	4904	11	NNC	ENSMUSG00000032294.18	novel	2041	11	NA	NA	-35	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6925.24600646071	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1834	False	NA	14	True	AATAAA	-14	NA	59563820	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59584429_59584628_59585509_59586010
ES.35253.120	chr9	+	2534	12	NIC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	40	-1117	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.71251452435445	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTCTGTTGTTTGTA	1676	False	NA	NA	False	ATTAAA	-11	NA	59587466	59625040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490
ES.35253.121	chr9	+	3269	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	53	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	13.6750106822541	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTGTGGTGTAGAAG	1689	False	NA	NA	False	AATAAA	-16	NA	59587479	59626153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625181_59625460_59625744_59625828
ES.35253.122	chr9	+	3538	13	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	53	-1	intron_retention	TRUE	non_canonical	0	0	junction_11	14.6995370297465	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	1689	False	NA	NA	False	AATAAA	-19	NA	59587479	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621557_59623205_59623311_59623490_59625164_59625443_59625714_59625801
ES.35253.123	chr9	+	3286	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	14.3213334475522	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	1690	False	NA	NA	False	AATAAA	-18	NA	59587480	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.124	chr9	+	3404	15	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	55	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.5506335041217	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTGGTGTAGAA	1691	False	NA	NA	False	AATAAA	-15	NA	59587481	59626152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59599882_59600024_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625164_59625443_59625714_59625801
ES.35253.125	chr9	+	3266	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	55	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	13.6750106822541	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	1691	False	NA	NA	False	AATAAA	-18	NA	59587481	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625195_59625474_59625714_59625801
ES.35253.126	chr9	+	3263	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	55	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	13.6750106822541	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTGGTGTAGAA	1691	False	NA	NA	False	AATAAA	-15	NA	59587481	59626152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59587536_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625171_59625450_59625714_59625801
ES.35253.127	chr9	+	156	1	Intergenic	novelGene_28621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAATCTTAA	5931	False	NA	NA	False	NA	NA	NA	59595272	59595428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59595300_59595400
ES.35253.128	chr9	+	3630	16	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.136029211367	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	59614886	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615043_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59620922_59620984_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625225_59625281_59625422_59625505_59625744_59625803
ES.35253.129	chr9	+	3406	15	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7712218637496	56	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	59614896	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615043_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59620922_59620984_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.13	chr9	+	2241	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	5271.33028750808	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1841	False	NA	17	True	AATAAA	-17	NA	59563827	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563922_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.130	chr9	+	3612	14	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.585989763986	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGTGGTGTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	59615045	59626151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625225_59625281_59625422_59625505_59625744_59625803
ES.35253.131	chr9	+	3670	12	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	14.518156201947	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	59615047	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.132	chr9	+	3709	12	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	9	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	15.2331738904556	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	59615055	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621557_59623205_59623311_59623490_59625171_59625450_59625714_59625801
ES.35253.133	chr9	+	3414	13	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	14.0482798472506	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59615066	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.134	chr9	+	3299	12	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	30	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	16.1945812792402	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59615076	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615379_59616734_59616793_59617144_59617221_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625155_59625449_59625714_59625801
ES.35253.135	chr9	+	3263	14	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.585989763986	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59615078	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59615144_59615282_59615379_59616734_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625142_59625435_59625714_59625801
ES.35253.136	chr9	+	3639	12	NNC	ENSMUSG00000074259.11	novel	3705	12	NA	NA	-1195	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	15.0530741485689	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGGTGTAGAAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59616244	59626155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59616793_59617144_59617221_59617784_59617889_59618448_59618548_59618827_59618900_59619366_59619463_59621078_59621224_59621459_59621557_59623205_59623311_59623490_59625171_59625450_59625714_59625801
ES.35253.137	chr9	+	3382	10	NNC	ENSMUSG00000074259.11	novel	1368	11	NA	NA	349	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	16.0277537068951	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	448	False	NA	NA	False	AATAAA	-19	NA	59617788	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59617889_59618448_59618548_59618827_59618900_59619366_59619430_59621078_59621557_59623205_59623311_59623490_59625225_59625281_59625422_59625505_59625744_59625803
ES.35253.138	chr9	+	2667	5	NNC	ENSMUSG00000074259.11	novel	706	7	NA	NA	-109	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	17.5410233452897	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCTGTGGTGTAGAAG	3019	False	NA	NA	False	AATAAA	-16	NA	59621289	59626153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59621557_59623205_59623311_59623490_59625185_59625464_59625714_59625801
ES.35253.139	chr9	+	3768	4	NNC	ENSMUSG00000074259.11	novel	4579	2	NA	NA	427	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18.3847763108502	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGGTGTAGAAGTTT	3555	False	NA	NA	False	AATAAA	-19	NA	59621825	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59623311_59623490_59625155_59625449_59625714_59625801
ES.35253.16	chr9	+	2202	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_8	5349.74751647216	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1850	False	NA	15	True	AATAAA	-15	NA	59563836	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582889_59583018_59585326_59585509_59586010
ES.35253.18	chr9	+	2406	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-18	-6	combination_of_known_splicesites	FALSE	canonical	2	41	junction_9	6611.8519767145	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1851	False	NA	14	True	AATAAA	-14	NA	59563837	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59582850_59583018_59585326_59585509_59586010
ES.35253.2	chr9	+	2402	11	FSM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	-177	-184	28	-2	multi-exon	FALSE	canonical	3	941	junction_8	6644.99062151332	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGTTTTGTTTTGTT	1692	False	NA	18	True	AATAAA	-18	NA	59563678	59586656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
ES.35253.22	chr9	+	2232	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	3	240	junction_1	5243.70720483133	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1853	False	NA	17	True	AATAAA	-17	NA	59563839	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572490_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.24	chr9	+	1744	8	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6044.78384009465	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1854	False	NA	15	True	AATAAA	-15	NA	59563840	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59577831_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.25	chr9	+	2219	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5152.78127228393	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTTGTGTTTTGT	1861	False	NA	12	True	AATAAA	-12	NA	59563847	59586650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573230_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.26	chr9	+	2347	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-8	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	6719.82049765179	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1861	False	NA	15	True	AATAAA	-15	NA	59563847	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.28	chr9	+	2724	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-7	-6	intron_retention	FALSE	canonical	3	15664	junction_4	1406.23709431664	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1862	False	NA	14	True	AATAAA	-14	NA	59563848	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.29	chr9	+	8031	9	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	15664	junction_5	1377.60024589864	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1865	False	NA	17	True	AATAAA	-17	NA	59563851	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59585509_59586010
ES.35253.30	chr9	+	2169	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	137	junction_1	5273.65686786693	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	1868	False	NA	16	True	AATAAA	-16	NA	59563854	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572537_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.31	chr9	+	2249	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	7088.2299772228	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1868	False	NA	17	True	AATAAA	-17	NA	59563854	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578853_59579009_59579203_59579357_59582830_59583018_59585326_59585509_59586010
ES.35253.37	chr9	+	2253	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5313.50969228438	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1869	False	NA	17	True	AATAAA	-17	NA	59563855	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563936_59572456_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.38	chr9	+	2193	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5152.78127228393	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1869	False	NA	14	True	AATAAA	-14	NA	59563855	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573210_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.39	chr9	+	1978	10	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5625.23051928201	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1869	False	NA	15	True	AATAAA	-15	NA	59563855	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59586072
ES.35253.40	chr9	+	4533	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	15664	junction_5	1302.07953332779	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1869	False	NA	17	True	AATAAA	-17	NA	59563855	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59585509_59586010
ES.35253.42	chr9	+	1994	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5133.0922325406	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1869	False	NA	17	True	AATAAA	-17	NA	59563855	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010_59586278_59586507
ES.35253.43	chr9	+	2053	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5547.25897166929	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1870	False	NA	14	True	AATAAA	-14	NA	59563856	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.47	chr9	+	2257	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	8805	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5133.0922325406	8113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCTTCCCAGGCTTC	1870	False	NA	NA	False	NA	NA	NA	59563856	59595463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010_59586649_59595422
ES.35253.48	chr9	+	4332	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5383.62981639711	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1870	False	NA	17	True	AATAAA	-17	NA	59563856	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59584429_59584628_59585509_59586010
ES.35253.5	chr9	+	1665	7	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-79	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6326.90243896824	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1790	False	NA	17	True	AATAAA	-17	NA	59563776	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563922_59577798_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.51	chr9	+	2195	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5345.03023751971	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1872	False	NA	17	True	AATAAA	-17	NA	59563858	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572656_59573177_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.52	chr9	+	2233	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7030.37900898664	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTGTGTTGTGTTTTG	1872	False	NA	11	True	AATAAA	-11	NA	59563858	59586649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573125_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579007_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.53	chr9	+	2219	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5360.55493862343	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1872	False	NA	17	True	AATAAA	-17	NA	59563858	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59578998_59579194_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.56	chr9	+	2162	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5383.59861430995	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576325_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.57	chr9	+	2210	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5337.10957447943	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1873	False	NA	15	True	AATAAA	-15	NA	59563859	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585513_59586022
ES.35253.58	chr9	+	2217	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5360.55493862343	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	1873	False	NA	16	True	AATAAA	-16	NA	59563859	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579013_59579209_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.6	chr9	+	5797	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-79	-3	intron_retention	FALSE	canonical	3	15664	junction_5	1411.83860512226	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1790	False	NA	17	True	AATAAA	-17	NA	59563776	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59583018_59585326_59585509_59586010
ES.35253.60	chr9	+	2371	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7709.53748599317	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1873	False	NA	14	True	AATAAA	-14	NA	59563859	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59566281_59566437_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579008_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.61	chr9	+	4814	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	15664	junction_4	885.771728808024	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.64	chr9	+	2295	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5313.50969228438	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	1873	False	NA	16	True	AATAAA	-16	NA	59563859	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572406_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.66	chr9	+	2331	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6736.66854910466	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59566748_59566860_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.67	chr9	+	5909	9	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	15664	junction_5	1497.17625361044	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59583018_59585326_59585509_59586010
ES.35253.68	chr9	+	5063	10	NIC	ENSMUSG00000032294.18	novel	2041	11	NA	NA	1	-8	intron_retention	FALSE	canonical	3	941	junction_8	5363.39384907047	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTGTTGTGTTTTGT	1873	False	NA	12	True	AATAAA	-12	NA	59563859	59586650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59585509_59586010
ES.35253.7	chr9	+	6284	9	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-67	-6	intron_retention	FALSE	canonical	3	15664	junction_5	1483.34237766437	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1802	False	NA	14	True	AATAAA	-14	NA	59563788	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59583018_59585326
ES.35253.70	chr9	+	2172	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5345.03023751971	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572610_59573153_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.71	chr9	+	2245	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5383.62981639711	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585301_59585509_59586010
ES.35253.77	chr9	+	2151	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5378.1801792056	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575907_59576207_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.78	chr9	+	2199	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5383.62981639711	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585347_59585509_59586010
ES.35253.79	chr9	+	2374	12	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6739.51158197954	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1873	False	NA	17	True	AATAAA	-17	NA	59563859	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59570927_59571082_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.82	chr9	+	2202	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5379.13504292279	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	1873	False	NA	16	True	AATAAA	-16	NA	59563859	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578004_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.83	chr9	+	1670	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	209	553	1	-367	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	8019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTACCTTGATGGCCCTC	1873	False	NA	NA	False	NA	NA	NA	59563859	59586105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.84	chr9	+	7938	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	1	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	8038.72476516021	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1873	False	NA	15	True	AATAAA	-15	NA	59563859	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59584429_59584628_59585509_59586010
ES.35253.85	chr9	+	2187	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	5288.78123956739	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	1874	False	NA	16	True	AATAAA	-16	NA	59563860	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563902_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.86	chr9	+	2411	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	2	-6	intron_retention	FALSE	canonical	3	15664	junction_5	1411.95648343393	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1874	False	NA	14	True	AATAAA	-14	NA	59563860	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.88	chr9	+	1747	9	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5739.93213701173	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	1893	False	NA	14	True	AATAAA	-14	NA	59563879	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573202_59577844_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.89	chr9	+	2191	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5345.03023751971	8081	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1893	False	NA	17	True	AATAAA	-17	NA	59563879	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572641_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.9	chr9	+	7877	10	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	-50	-3	intron_retention	TRUE	non_canonical	0	0	junction_8	5650.7732891554	8081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	1819	False	NA	17	True	AATAAA	-17	NA	59563805	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59584429_59584628_59585509_59586010
ES.35253.90	chr9	+	2191	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	582	5	NA	NA	-6	-5	multi-exon	FALSE	canonical	2	38	junction_1	5302.45371596962	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	1949	False	NA	15	True	AATAAA	-15	NA	59563935	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59563982_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.91	chr9	+	2191	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	725	6	NA	NA	-11	-3	multi-exon	FALSE	canonical	3	209	junction_1	5252.72002299761	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	2523	False	NA	17	True	AATAAA	-17	NA	59564509	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.93	chr9	+	2206	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	625	5	NA	NA	1	-3	multi-exon	FALSE	canonical	3	73	junction_1	5292.27187132332	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	2535	False	NA	17	True	AATAAA	-17	NA	59564521	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564581_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.94	chr9	+	2214	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	625	5	NA	NA	5	-4	multi-exon	FALSE	canonical	0	0	junction_1	5313.50969228438	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTGTGTTTTGTTTTG	2541	False	NA	16	True	AATAAA	-16	NA	59564527	59586654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564596_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.95	chr9	+	2443	13	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	725	6	NA	NA	5	-5	multi-exon	FALSE	canonical	1	1	junction_1	7517.44496109254	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTGTGTTTTGTTTT	2541	False	NA	15	True	AATAAA	-15	NA	59564527	59586653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564554_59566281_59566437_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.96	chr9	+	2170	11	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	725	6	NA	NA	5	-6	multi-exon	FALSE	canonical	3	209	junction_1	7672.28055013631	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	2541	False	NA	14	True	AATAAA	-14	NA	59564527	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
ES.35253.97	chr9	+	2372	12	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	625	5	NA	NA	5	-3	multi-exon	FALSE	canonical	0	0	junction_1	6721.53212069888	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTGTTTTGTTTTGT	2541	False	NA	17	True	AATAAA	-17	NA	59564527	59586655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564636_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35253.99	chr9	+	2286	12	Fusion	ENSMUSG00000032294.18_ENSMUSG00000111394.2	novel	725	6	NA	NA	6	-6	multi-exon	FALSE	canonical	1	2	junction_1	6721.15171161747	8081	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	2542	False	NA	14	True	AATAAA	-14	NA	59564528	59586652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_59564554_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ES.35254.1	chr9	+	5375	3	Intergenic	novelGene_28623	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59630640	59636773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59633483_59634159_59634398_59634478
ES.35255.1	chr9	+	163	1	Intergenic	novelGene_28626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAAAGAGGTCAAGA	1889	False	NA	NA	False	NA	NA	NA	59655501	59655664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59655500_59655700
ES.35256.1	chr9	+	9348	42	NNC	ENSMUSG00000039585.16	novel	679	5	NA	NA	-88	-2424	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	16.0949739236759	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAATTTTGGTTTTCT	467	False	NA	NA	False	NA	NA	NA	59658090	59833725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658169_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.10	chr9	+	9736	43	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	-4	-2463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	16.328820701065	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATGCACTGTTACAAG	551	False	NA	NA	False	AATACA	-13	NA	59658174	59833686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728870_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.11	chr9	+	7828	29	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	-4	5973	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.4303487732879	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGATTTTAAGAACAA	551	False	NA	NA	False	NA	NA	NA	59658174	59798620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722625_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695
ES.35256.12	chr9	+	3733	19	NIC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	9	-23350	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	10.1447851956888	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTTTACCTATACCTT	564	False	NA	NA	False	NA	NA	NA	59658187	59769297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707
ES.35256.13	chr9	+	12124	42	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	13.425716043437	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGGTTTGTTTTCTG	572	False	NA	12	True	ATTAAA	-24	NA	59658195	59836149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.14	chr9	+	10459	42	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	20	-1665	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_25	14.6749431337428	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTTTTTAATCAT	575	False	NA	NA	False	AATAAA	-34	NA	59658198	59834484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.15	chr9	+	4293	1	NIC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	20	-130156	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATCTCAAAACAACAACA	575	False	NA	NA	False	NA	NA	NA	59658198	59662491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658200_59662500
ES.35256.16	chr9	+	9667	42	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	28	-2458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	19.4688237486464	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCACTGTTACAAGAAGAG	583	False	NA	NA	False	AATACA	-18	NA	59658206	59833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762800_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772979_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831851
ES.35256.17	chr9	+	3684	15	ISM	ENSMUSG00000039585.16	ENSMUST00000136740.8	12252	44	40	95657	40	-52155	5prime_fragment	FALSE	canonical	3	21	junction_5	11.9189439334949	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTGCTTAAAAATAAAT	595	False	NA	NA	False	AATAAA	-16	NA	59658218	59740492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471
ES.35256.18	chr9	+	12141	43	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	52	-8	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_26	15.2484339926769	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCAATATGTGTGGTTT	607	False	NA	4	True	ATTAAA	-16	NA	59658230	59836141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.2	chr9	+	8967	42	NNC	ENSMUSG00000039585.16	novel	679	5	NA	NA	-42	-2756	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.9995042551432	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTTAACCTTGTGCT	513	False	NA	NA	False	AATACA	-18	NA	59658136	59833393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658169_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.20	chr9	+	10263	42	FSM	ENSMUSG00000039585.16	ENSMUST00000128341.2	11985	42	53	1669	53	-1669	multi-exon	FALSE	canonical	1	4	junction_26	16.0855091618831	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTGTGGATTTTTTAA	608	False	NA	NA	False	AATAAA	-30	NA	59658231	59834480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.21	chr9	+	9057	42	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	54	-3030	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	13.425716043437	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGCCTACTCATCTG	609	False	NA	NA	False	TATAAA	-11	NA	59658232	59833119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.22	chr9	+	11959	42	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	61	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	17.4945899685519	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGCAATATGTGTGGT	616	False	NA	2	True	ATTAAA	-14	NA	59658239	59836139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782449_59782552_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.25	chr9	+	3479	16	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	76	-40156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.949085658223	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTGCAATTCTTC	631	False	NA	NA	False	AATAAA	-16	NA	59658254	59752491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59751778
ES.35256.26	chr9	+	10314	41	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	79	-1670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	16.937661438345	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTTGTGGATTTTTTA	634	False	NA	NA	False	AATAAA	-29	NA	59658257	59834479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739587_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.27	chr9	+	4031	23	NIC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	80	-15397	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	10.4510863842746	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGGAAACCTCTATG	635	False	NA	NA	False	NA	NA	NA	59658258	59777250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756
ES.35256.28	chr9	+	7800	28	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	84	5991	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	11.5599469338685	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCTGGTATTAGTAC	639	False	NA	NA	False	NA	NA	NA	59658262	59798638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695
ES.35256.29	chr9	+	11890	42	FSM	ENSMUSG00000039585.16	ENSMUST00000128341.2	11985	42	84	11	84	-11	multi-exon	FALSE	canonical	1	4	junction_26	16.0855091618831	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTGCAATATGTGTGG	639	False	NA	1	True	ATTAAA	-13	NA	59658262	59836138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.3	chr9	+	10055	42	NNC	ENSMUSG00000039585.16	novel	679	5	NA	NA	-40	-1666	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	14.9995042551432	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGGATTTTTTAATCA	515	False	NA	NA	False	AATAAA	-33	NA	59658138	59834483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658169_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.30	chr9	+	10167	41	NIC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	94	-1667	combination_of_known_splicesites	FALSE	canonical	1	4	junction_25	15.5796140837955	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGGATTTTTTAATC	649	False	NA	NA	False	AATAAA	-32	NA	59658272	59834482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.31	chr9	+	9578	42	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	103	-2460	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	13.425716043437	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCACTGTTACAAGAAG	658	False	NA	NA	False	AATACA	-16	NA	59658281	59833689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.32	chr9	+	10215	42	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	103	-1669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	19.1551789453483	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTGTGGATTTTTTAA	658	False	NA	NA	False	AATAAA	-30	NA	59658281	59834480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59792588_59792648_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.33	chr9	+	6932	32	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	248	-8046	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	17.1246273420036	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCAAGACTTTATCCT	803	False	NA	NA	False	AATAAA	-24	NA	59658426	59805504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59804773
ES.35256.35	chr9	+	170	1	Intergenic	novelGene_28627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAATAAATGGC	1233	False	NA	NA	False	NA	NA	NA	59660839	59661009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59660800_59661000
ES.35256.36	chr9	+	3332	1	Intergenic	novelGene_28629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAATGAAACAAAAACTC	2240	False	NA	NA	False	AAAACA	-44	NA	59667557	59670889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59667600_59670900
ES.35256.37	chr9	+	11754	42	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	28645	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.6481996121131	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGGTTTGTTTTCTG	6625	False	NA	12	True	ATTAAA	-24	NA	59686823	59836149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697380_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.38	chr9	+	10084	42	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	28645	1666	28645	-1666	3prime_fragment	FALSE	canonical	3	21	junction_4	13.7936694995545	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGGATTTTTTAATCA	6625	False	NA	NA	False	AATAAA	-33	NA	59686823	59834483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.39	chr9	+	9154	42	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	28645	-2459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	17.7518086484587	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCACTGTTACAAGAAGA	6625	False	NA	NA	False	AATACA	-17	NA	59686823	59833690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782475_59782552_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.4	chr9	+	10112	43	NNC	ENSMUSG00000039585.16	novel	679	5	NA	NA	-40	-1669	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	16.5622751129215	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTGTGGATTTTTTAA	515	False	NA	NA	False	AATAAA	-30	NA	59658138	59834480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658169_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.40	chr9	+	9039	41	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	28646	-2507	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	15.2249589490415	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTTTAAAG	6626	False	NA	NA	False	NA	NA	NA	59686824	59833642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782552_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.41	chr9	+	156	1	Intergenic	novelGene_28632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	59693689	59693845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59693700_59693800
ES.35256.42	chr9	+	6689	13	ISM	ENSMUSG00000039585.16	ENSMUST00000136740.8	12252	44	47639	66887	47639	-23385	intron_retention	FALSE	canonical	3	33	junction_12	8.00130197738676	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59705817	59769262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362
ES.35256.43	chr9	+	4101	19	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	-44529	10070	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	15.0943534532897	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCTGCCTAAGAAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	59734524	59802717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475
ES.35256.44	chr9	+	5798	28	NNC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	-39493	-3398	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.8631117873445	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTTATAAGCCCTCT	NA	False	NA	NA	False	TATAAA	-9	NA	59739560	59832751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776753_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.45	chr9	+	226	1	Intergenic	novelGene_28633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTTTGCTTTAAATAAG	NA	False	NA	NA	False	NA	NA	NA	59746061	59746287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59746100_59746300
ES.35256.46	chr9	+	7010	3	NIC	ENSMUSG00000039585.16	novel	11985	42	NA	NA	-21221	-23350	intron_retention	FALSE	canonical	3	33	junction_1	11	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTTTACCTATACCTT	6573	False	NA	NA	False	NA	NA	NA	59757832	59769297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59764130_59767362_59767486_59768707
ES.35256.47	chr9	+	4688	1	NIC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	-14450	-23356	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAAATTTTTACCTA	NA	False	NA	NA	False	NA	NA	NA	59764603	59769291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59764600_59769300
ES.35256.49	chr9	+	8286	19	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	-2288	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	19.3970851825795	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATATGTGTGGTTTGTT	NA	False	NA	7	True	ATTAAA	-19	NA	59776765	59836144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.5	chr9	+	3760	24	NNC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	-40	-13900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1909739944499	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTGAAAAAGAGAAAAGGC	515	False	NA	NA	False	NA	NA	NA	59658138	59778747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658169_59687611_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718
ES.35256.50	chr9	+	8114	20	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	118827	161	-2048	-161	3prime_fragment	FALSE	canonical	3	32	junction_1	13.6377754662405	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCACTTTGTAATTTCC	NA	False	NA	NA	False	NA	NA	NA	59777005	59835988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.51	chr9	+	6313	20	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	-1207	-1667	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	20.4870068951896	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGGATTTTTTAATC	NA	False	NA	NA	False	AATAAA	-32	NA	59777846	59834482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59779315_59781884_59781967_59782481_59782552_59782650_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.52	chr9	+	7791	20	NNC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	-865	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	23.9216171550549	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGGTTTGTTTTCTG	NA	False	NA	12	True	ATTAAA	-24	NA	59778188	59836149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59819819_59819874_59829005_59829209_59830903_59831026_59831853
ES.35256.53	chr9	+	2516	1	NIC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	-169	-11247	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTCCAGGTTCAGTTA	NA	False	NA	NA	False	NA	NA	NA	59778884	59781400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59778900_59781400
ES.35256.54	chr9	+	3670	16	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	3596	-2467	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.5845744287578	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACCACATGCACTGTTA	NA	False	NA	NA	False	AATACA	-9	NA	59782649	59833682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_59782698_59791762_59791876_59796695_59796839_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.55	chr9	+	3741	15	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	138515	2461	-7113	-2461	3prime_fragment	FALSE	canonical	3	42	junction_1	12.8684474112268	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGCACTGTTACAAGAA	NA	False	NA	NA	False	AATACA	-15	NA	59796693	59833688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.56	chr9	+	5299	8	ISM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	154994	8	50	-8	3prime_fragment	FALSE	canonical	3	44	junction_6	9.29559913428425	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCAATATGTGTGGTTT	NA	False	NA	4	True	ATTAAA	-16	NA	59813172	59836141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.7	chr9	+	10558	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	-29	1669	-29	-1669	multi-exon	FALSE	canonical	3	21	junction_5	14.12370436335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTGTGGATTTTTTAA	526	False	NA	NA	False	AATAAA	-30	NA	59658149	59834480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.8	chr9	+	8753	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	-19	3464	-19	-3464	multi-exon	FALSE	canonical	3	21	junction_5	14.12370436335	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACAAAAGCTTTTGAGT	536	False	NA	NA	False	AAGAAA	-24	NA	59658159	59832685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35256.9	chr9	+	8992	44	NNC	ENSMUSG00000039585.16	novel	12252	44	NA	NA	-10	-2510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8310641713593	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAAATGTTTATTTTTA	545	False	NA	NA	False	NA	NA	NA	59658168	59833639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_59658629_59685754_59685815_59686825_59686903_59687611_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ES.35257.1	chr9	+	1655	1	Intergenic	novelGene_28637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCGCTG	NA	False	NA	NA	False	NA	NA	NA	59844011	59845666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59844000_59845700
ES.35258.1	chr9	+	268	1	Intergenic	novelGene_28638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	59885788	59886056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_59885800_59886100
ES.35259.1	chr9	+	3891	1	Intergenic	novelGene_28639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCACAGAAA	NA	False	NA	NA	False	NA	NA	NA	60104821	60108712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60104800_60108700
ES.3526.1	chr10	-	2782	7	FSM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	23	2	23	-2	multi-exon	FALSE	canonical	0	0	junction_2	1.21335164821342	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTTGTCTCGGTTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	88192914	88158667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88160648_88161195_88161289_88164944_88165004_88172672_88172851_88176381_88176525_88180505_88180574_88192653
ES.35260.1	chr9	+	1906	2	Antisense	novelGene_ENSMUSG00000032289.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60184269	60186718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_60185733_60186275
ES.35261.1	chr9	-	423	2	Antisense	novelGene_ENSMUSG00000111394.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59664451	59553723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59554076_59664380
ES.35261.10	chr9	-	3763	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	-1	-192	-1	-2	multi-exon	FALSE	canonical	3	14	junction_2	2.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGTCTCTGTCTCCT	6428	False	NA	-6	True	AATAAA	-16	NA	59657922	59641543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647316_59657860
ES.35261.11	chr9	-	3732	1	NIC	ENSMUSG00000051705.14	novel	3682	2	NA	NA	11131	710	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59646774	59643042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59643000_59646800
ES.35261.12	chr9	-	1466	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	24	2192	2	19	multi-exon	FALSE	canonical	3	38	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTTTCCCTGAGTG	6442	False	NA	-3	True	AATAAA	-34	NA	59657908	59643733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59657860
ES.35261.13	chr9	-	1551	3	FSM	ENSMUSG00000051705.14	ENSMUST00000213257.2	764	3	-16	-771	0	-21	multi-exon	FALSE	canonical	1	1	junction_2	9	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	6429	False	NA	-43	True	NA	NA	NA	59657921	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647335_59657860
ES.35261.14	chr9	-	1612	4	FSM	ENSMUSG00000051705.14	ENSMUST00000217093.2	1663	4	30	21	14	-21	multi-exon	FALSE	canonical	2	3	junction_2	6.59966329107444	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	6459	False	NA	-43	True	NA	NA	NA	59657891	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647316_59657544_59657655_59657860
ES.35261.15	chr9	-	3211	1	NIC	ENSMUSG00000051705.14	novel	3682	2	NA	NA	10921	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	NA	False	NA	-43	True	NA	NA	NA	59646984	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59643800_59647000
ES.35261.16	chr9	-	1490	2	ISM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	254	21	249	-21	3prime_fragment	FALSE	canonical	2	5	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	6694	False	NA	-43	True	NA	NA	NA	59657656	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_59645152_59657544
ES.35261.17	chr9	-	1659	4	FSM	ENSMUSG00000051705.14	ENSMUST00000216045.2	392	4	74	-1341	2	-21	multi-exon	FALSE	canonical	0	0	junction_2	7.76029781788188	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	6431	False	NA	-43	True	NA	NA	NA	59657919	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647335_59657544_59657655_59657860
ES.35261.18	chr9	-	1519	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	13	2038	2	-21	multi-exon	FALSE	canonical	3	14	junction_2	2.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	6442	False	NA	-43	True	NA	NA	NA	59657908	59643773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647316_59657860
ES.35261.19	chr9	-	3805	1	Intergenic	novelGene_28624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59653141	59649336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59649300_59653100
ES.35261.2	chr9	-	176	1	Intergenic	novelGene_28619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATACTAACATATC	7026	False	NA	NA	False	NA	NA	NA	59558076	59557900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59557900_59558100
ES.35261.20	chr9	-	4026	1	Intergenic	novelGene_28625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTATGTCTGTCTTA	8230	False	NA	NA	False	ATTAAA	-15	NA	59656120	59652094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59652100_59656100
ES.35261.21	chr9	-	177	1	Intergenic	novelGene_28628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59664450	59664273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59664300_59664400
ES.35261.3	chr9	-	6753	3	Antisense	novelGene_ENSMUSG00000111394.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTGACTCCTGACCT	NA	False	NA	NA	False	AATAAA	-10	NA	59582811	59575730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59576708_59576846_59577149_59577337
ES.35261.4	chr9	-	179	1	Intergenic	novelGene_28620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	59591077	59590898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59590900_59591100
ES.35261.5	chr9	-	177	1	Intergenic	novelGene_28622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAACTTTGGA	NA	False	NA	NA	False	NA	NA	NA	59596375	59596198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59596200_59596400
ES.35261.6	chr9	-	4716	3	Antisense	novelGene_ENSMUSG00000074259.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGACATTGGGTTGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	59625724	59620868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59625142_59625197_59625401_59625484
ES.35261.7	chr9	-	4518	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	-948	0	754	multi-exon	FALSE	canonical	3	14	junction_2	2.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGTCTGTGTGTCAAA	6429	False	NA	NA	False	NA	NA	NA	59657921	59640787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647316_59657860
ES.35261.8	chr9	-	3746	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	-61	-3	0	3	multi-exon	FALSE	canonical	3	38	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTCTGTCTCCTCATAT	6357	False	NA	-1	True	AATAAA	-21	NA	59657993	59641538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59657860
ES.35261.9	chr9	-	3757	3	FSM	ENSMUSG00000051705.14	ENSMUST00000213257.2	764	3	8	-3001	8	-2	multi-exon	FALSE	canonical	1	1	junction_2	9	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGTCTCTGTCTCCT	6453	False	NA	-6	True	AATAAA	-16	NA	59657897	59641543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_59645152_59647222_59647335_59657860
ES.35262.1	chr9	-	127	1	Intergenic	novelGene_28630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAAAAAATTT	5353	False	NA	NA	False	NA	NA	NA	59675448	59675321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59675300_59675400
ES.35263.1	chr9	-	3243	1	Intergenic	novelGene_28631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAAGATAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	59680886	59677643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59677600_59680900
ES.35264.1	chr9	-	4839	14	NNC	ENSMUSG00000032289.16	novel	8522	17	NA	NA	121121	191530	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.81977855980853	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGGCAAATAGTTTC	NA	False	NA	NA	False	NA	NA	NA	60283288	59682683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59682727_59876977_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235
ES.35264.10	chr9	-	3412	1	Intergenic	novelGene_28636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCTTACTTTAGGATC	NA	False	NA	NA	False	NA	NA	NA	59842889	59839477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59839500_59842900
ES.35264.11	chr9	-	2729	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	43	-105999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATACAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	59848317	59839538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59842055_59847284_59847453_59848272
ES.35264.12	chr9	-	2653	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	37	-105999	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATACAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	59848323	59839538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59841973_59847284_59847453_59848272
ES.35264.13	chr9	-	564	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	13	-113313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGTGGTCTCCTGCCT	NA	False	NA	NA	False	AATAAA	-12	NA	59848347	59846852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59847245_59847355_59847453_59848272
ES.35264.15	chr9	-	1884	7	NIC	ENSMUSG00000032292.9	novel	2037	8	NA	NA	-29	-55	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	4.42530601578392	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACTTTGCTGTATTTTA	NA	False	NA	0	True	NA	NA	NA	59857429	59850108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59850803_59854244_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207_59856312_59857070
ES.35264.17	chr9	-	1996	8	NNC	ENSMUSG00000032292.9	novel	2037	8	NA	NA	-12	-55	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	4.43547848464572	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACTTTGCTGTATTTTA	NA	False	NA	0	True	NA	NA	NA	59857412	59850108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59850803_59854244_59854351_59854595_59854837_59855643_59855804_59855885_59856108_59856207_59856312_59856464_59856592_59857070
ES.35264.18	chr9	-	1454	6	ISM	ENSMUSG00000032292.9	ENSMUST00000034831.3	2037	8	725	3779	2	200	internal_fragment	FALSE	canonical	1	3	junction_5	3.42928563989645	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAGGATGTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	59856675	59853832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207_59856312_59856464
ES.35264.19	chr9	-	7673	13	NNC	ENSMUSG00000032289.16	novel	8522	17	NA	NA	-112420	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.52959210872636	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCTGTCTGTGTTCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	60160923	59874213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60160757
ES.35264.2	chr9	-	5565	1	Antisense	novelGene_ENSMUSG00000039585.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAGAGATGTCACAACT	NA	False	NA	NA	False	NA	NA	NA	59732410	59726845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59726800_59732400
ES.35264.20	chr9	-	8830	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-51	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTAGCTGTCTGTGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	60429380	59874216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.22	chr9	-	6078	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-35	49	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGAGCTTCTATTG	NA	False	NA	NA	False	NA	NA	NA	60429364	59876952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.23	chr9	-	6043	18	NNC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-3	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.66480056117811	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGCTGTCTCCCTTTC	NA	False	NA	NA	False	AATGAA	-3	NA	60429332	59877026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429077
ES.35264.24	chr9	-	4745	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	38	-1211	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATACGATCTCTCCATGA	NA	False	NA	NA	False	AAGAAA	-13	NA	60429291	59878212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.25	chr9	-	3697	14	ISM	ENSMUSG00000032289.16	ENSMUST00000171654.8	8522	17	102581	4360	102581	-1572	3prime_fragment	FALSE	canonical	0	0	junction_11	5.48262451729399	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGACTGTCTGGAG	NA	False	NA	NA	False	AATAGA	-15	NA	60301828	59878573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381
ES.35264.26	chr9	-	4245	17	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	30	-1574	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.71182982939793	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGGACTGTCTGG	NA	False	NA	NA	False	AATAGA	-13	NA	60429299	59878575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59879822_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.27	chr9	-	3801	18	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	-32	-2225	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.36359637649641	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGAGTGCTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	60429361	59879226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59879822_59883470_59883616_59887051_59887232_59890006_59890181_59894541_59894716_59895207_59895413_59896246_59896377_59904288_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.28	chr9	-	6038	11	NIC	ENSMUSG00000032289.16	novel	8796	18	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	5.88557558782486	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGTCTTTACTTTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	60429309	59900396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_59904565_59907223_59907321_59910133_59910310_59964133_59964339_60159932_60160070_60283235_60283339_60301381_60301830_60335446_60335809_60389705_60389779_60404380_60404489_60429148
ES.35264.3	chr9	-	3582	1	Antisense	novelGene_ENSMUSG00000039585.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGACAACTATATAATCT	8728	False	NA	NA	False	NA	NA	NA	59741902	59738320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59738300_59741900
ES.35264.4	chr9	-	8132	1	Intergenic	novelGene_28634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACCGTGATGCCAAGA	NA	False	NA	NA	False	NA	NA	NA	59761851	59753719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59753700_59761900
ES.35264.5	chr9	-	2892	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	47	-40675	intron_retention	FALSE	canonical	0	0	junction_1	0.5	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCACCATATTTAAG	NA	False	NA	NA	False	TTTAAA	-15	NA	59848313	59774214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59776990_59847284_59847361_59848272
ES.35264.6	chr9	-	2271	11	Intergenic	novelGene_28635	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59815531	59790876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_59791874_59796693_59796838_59801422_59801646_59802041_59802160_59802474_59802663_59803770_59803820_59807631_59807745_59810189_59810250_59813172_59813366_59814628_59814759_59815475
ES.35264.7	chr9	-	8268	1	Antisense	novelGene_ENSMUSG00000039585.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	59839703	59831435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59831400_59839700
ES.35264.8	chr9	-	4421	1	Antisense	novelGene_ENSMUSG00000039585.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGGTATCATGTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	59838056	59833635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_59833600_59838100
ES.35264.9	chr9	-	2631	3	NNC	ENSMUSG00000110803.2	novel	1387	4	NA	NA	28	-105938	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCTTACTTTAGGATC	NA	False	NA	NA	False	NA	NA	NA	59848332	59839477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_59841973_59847284_59847361_59848272
ES.35265.1	chr9	+	177	1	Intergenic	novelGene_28641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	60588686	60588863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60588700_60588900
ES.35266.1	chr9	-	2856	18	NNC	ENSMUSG00000047766.16	novel	3017	17	NA	NA	71	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.84479445072417	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3606	False	NA	NA	False	AATAAA	-21	NA	60595330	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494549_60494598_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
ES.35266.10	chr9	-	2749	17	NNC	ENSMUSG00000047766.16	novel	3017	17	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.92707550124871	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCCAGTTTG	3505	False	NA	NA	False	AATAAA	-11	NA	60595431	60494521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494549_60494598_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
ES.35266.11	chr9	-	9285	10	NNC	ENSMUSG00000047766.16	novel	2586	16	NA	NA	-1296	0	intron_retention	FALSE	non_canonical	0	0	junction_1	8.19816299808743	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCCAGTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	60558380	60494521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494549_60494598_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60558285
ES.35266.12	chr9	-	1954	10	NNC	ENSMUSG00000047766.16	novel	2779	16	NA	NA	-1283	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.71402442564879	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGTCCAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	60558367	60494523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60558210
ES.35266.13	chr9	-	4642	4	NNC	ENSMUSG00000047766.16	novel	1688	10	NA	NA	-13	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.84754619472471	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTATAAATATTTTCA	NA	False	NA	NA	False	NA	NA	NA	60557006	60518099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60522461_60528851_60529000_60556762_60556825_60556935
ES.35266.14	chr9	-	1419	4	NNC	ENSMUSG00000047766.16	novel	1688	10	NA	NA	-105	-3953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.84754619472471	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCACATGATTCTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	60557189	60521505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60522461_60528851_60529000_60556762_60556825_60556935
ES.35266.15	chr9	-	175	1	Intergenic	novelGene_28640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATATGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	60525679	60525504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_60525500_60525700
ES.35266.2	chr9	-	2833	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	184	0	-71	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3679	False	NA	NA	False	AATAAA	-21	NA	60595257	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
ES.35266.3	chr9	-	2600	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114034.9	2779	16	179	0	-36	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23965811029205	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3714	False	NA	NA	False	AATAAA	-21	NA	60595222	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
ES.35266.4	chr9	-	3056	19	NNC	ENSMUSG00000047766.16	novel	3017	17	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.73739516572711	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3499	False	NA	NA	False	AATAAA	-21	NA	60595437	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494549_60494599_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60594693_60594788_60595094
ES.35266.5	chr9	-	2615	16	NNC	ENSMUSG00000047766.16	novel	2779	16	NA	NA	58	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.76201577484154	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3593	False	NA	NA	False	AATAAA	-21	NA	60595343	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494550_60494598_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60595094
ES.35266.6	chr9	-	2083	10	NNC	ENSMUSG00000047766.16	novel	2779	16	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	9.17726659862414	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	60557114	60494511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522281_60522461_60528851_60529000_60556762_60556825_60556935
ES.35266.7	chr9	-	2482	17	NNC	ENSMUSG00000047766.16	novel	3017	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.92707550124871	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCCAGTTTG	3771	False	NA	NA	False	AATAAA	-11	NA	60595165	60494521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_60494558_60494608_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
ES.35267.1	chr9	+	202	1	Intergenic	novelGene_28642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGAACAATTCCATTG	NA	False	NA	NA	False	NA	NA	NA	60684794	60684996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60684800_60685000
ES.35268.1	chr9	+	4840	21	NNC	ENSMUSG00000034485.11	novel	3824	20	NA	NA	-6617	2	intron_retention	FALSE	canonical	0	0	junction_1	51.0296727404752	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTCTGAGATGAG	NA	False	NA	23	True	AATAAA	-24	NA	60695206	60787647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60695305_60701057_60701402_60701848_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.11	chr9	+	4430	20	NNC	ENSMUSG00000034485.11	novel	4428	19	NA	NA	-53	-4	intron_retention	FALSE	non_canonical	0	0	junction_11	46.8359546523763	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTTGAATTTTACTTTT	NA	False	NA	13	True	AATAAA	-14	NA	60701770	60787637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768364_60768405_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.12	chr9	+	4307	18	NIC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-49	-6	intron_retention	FALSE	canonical	0	0	junction_16	40.6852208698912	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTGTTGAATTTTACTT	NA	False	NA	11	True	AATAAA	-12	NA	60701774	60787635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60783643_60783710_60787455
ES.35268.13	chr9	+	4455	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-47	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	43.7391256326771	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTTACTTTTCT	NA	False	NA	15	True	AATAAA	-16	NA	60701776	60787639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766428_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.14	chr9	+	4502	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-47	-5	intron_retention	FALSE	canonical	0	0	junction_16	42.3837917424708	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTGTTGAATTTTACTTT	NA	False	NA	12	True	AATAAA	-13	NA	60701776	60787636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781271_60781468_60783643_60783710_60787455
ES.35268.16	chr9	+	4391	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-40	-6	intron_retention	FALSE	canonical	2	4	junction_16	41.6904006477851	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTGTTGAATTTTACTT	NA	False	NA	11	True	AATAAA	-12	NA	60701783	60787635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781374_60781468_60783643_60783710_60787455
ES.35268.17	chr9	+	4744	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-39	-288	-39	277	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTGTAATTATACCTT	NA	False	NA	NA	False	NA	NA	NA	60701784	60787929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.18	chr9	+	4114	20	NNC	ENSMUSG00000034485.11	novel	4428	19	NA	NA	-39	-3	intron_retention	FALSE	non_canonical	0	0	junction_16	46.8359546523763	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAATTTTACTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	60701784	60787638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60778639_60778983_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.19	chr9	+	5303	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-38	-1	intron_retention	FALSE	canonical	0	0	junction_7	53.7619639283397	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTACTTTTCTGAGAT	NA	False	NA	20	True	AATAAA	-21	NA	60701785	60787644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761602_60761780_60763479_60764368_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.2	chr9	+	4524	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-98	-9	-98	-2	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCTGAGATGAGTGT	NA	False	NA	26	True	AATAAA	-27	NA	60701725	60787650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.20	chr9	+	6234	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	-30	-1787	-30	1776	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTGTGAGTAGTGT	NA	False	NA	NA	False	CATAAA	-17	NA	60701793	60789428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.25	chr9	+	6514	18	NIC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-16	-9	intron_retention	FALSE	canonical	3	92	junction_11	29.8641676949271	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCGTTGTTGAATTTTA	NA	False	NA	8	True	AATAAA	-9	NA	60701807	60787632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.26	chr9	+	4782	19	NNC	ENSMUSG00000034485.11	novel	4493	7	NA	NA	27086	-1	intron_retention	FALSE	canonical	1	1	junction_1	43.6742995873368	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTTACTTTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	60728992	60787640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60729510_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.27	chr9	+	4266	18	ISM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	46297	1	-21575	-1	3prime_fragment	FALSE	canonical	3	92	junction_10	29.8349554629138	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTTACTTTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	60748120	60787640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.28	chr9	+	3952	14	NNC	ENSMUSG00000034485.11	novel	4428	19	NA	NA	-12286	-2	intron_retention	FALSE	canonical	0	0	junction_2	54.2834986423321	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTTACTTTTCT	NA	False	NA	15	True	AATAAA	-16	NA	60757409	60787639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60757483_60757582_60757690_60761571_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.29	chr9	+	3921	14	ISM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	55586	1	-12286	-1	3prime_fragment	FALSE	canonical	3	92	junction_6	32.4119197885392	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTTACTTTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	60757409	60787640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.3	chr9	+	4515	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	-88	1	-82	-1	multi-exon	FALSE	canonical	3	41	junction_8	35.7857134056402	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTGAGATGAGTGTG	NA	False	NA	27	True	AATAAA	-28	NA	60701741	60787651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.30	chr9	+	6145	3	NIC	ENSMUSG00000034485.11	novel	4493	7	NA	NA	2146	-2	intron_retention	FALSE	canonical	3	186	junction_2	5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTTACTTTTCT	NA	False	NA	15	True	AATAAA	-16	NA	60775572	60787639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_60781468_60783643_60783710_60787455
ES.35268.31	chr9	+	2987	3	ISM	ENSMUSG00000034485.11	ENSMUST00000214997.2	4493	7	7200	3838	3469	-3834	internal_fragment	FALSE	canonical	3	182	junction_1	7	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTGCTCTAGCCC	NA	False	NA	NA	False	AATAAA	-21	NA	60776895	60783807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_60779566_60781314_60781468_60783643
ES.35268.5	chr9	+	3967	20	NNC	ENSMUSG00000034485.11	novel	3824	20	NA	NA	-58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	42.6765195225613	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTTACTTTTCTG	NA	False	NA	16	True	AATAAA	-17	NA	60701765	60787640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60777313_60777819_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.6	chr9	+	4415	18	NIC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-58	2	intron_retention	FALSE	canonical	3	7	junction_17	39.0627212796501	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTCTGAGATGAG	NA	False	NA	23	True	AATAAA	-24	NA	60701765	60787647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60787455
ES.35268.7	chr9	+	4418	18	NIC	ENSMUSG00000034485.11	novel	4428	19	NA	NA	-57	0	intron_retention	FALSE	canonical	3	7	junction_17	43.6227933182392	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACTTTTCTGAGATG	NA	False	NA	21	True	AATAAA	-22	NA	60701766	60787645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60787455
ES.35268.8	chr9	+	3973	20	NNC	ENSMUSG00000034485.11	novel	3824	20	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	46.8359546523763	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTACTTTTCTGA	NA	False	NA	17	True	AATAAA	-18	NA	60701766	60787641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60777313_60777819_60779566_60781314_60781468_60783643_60783710_60787455
ES.35268.9	chr9	+	4451	19	NNC	ENSMUSG00000034485.11	novel	4417	19	NA	NA	-57	-2	intron_retention	FALSE	canonical	0	0	junction_9	43.7391256326771	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAATTTTACTTTTCT	NA	False	NA	15	True	AATAAA	-16	NA	60701766	60787639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766442_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ES.35269.1	chr9	-	200	1	Intergenic	novelGene_28643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCCCTCCGTCCCTAA	NA	False	NA	NA	False	AAGAAA	-10	NA	60779990	60779790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_60779800_60780000
ES.3527.1	chr10	+	180	1	Intergenic	novelGene_2700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAAAAATATCAAT	NA	False	NA	NA	False	NA	NA	NA	88199197	88199377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_88199200_88199400
ES.35270.1	chr9	+	3013	1	Intergenic	novelGene_28644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTATTTGTTTGTTA	8552	False	NA	NA	False	NA	NA	NA	60874690	60877703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60874700_60877700
ES.35271.1	chr9	+	198	1	Intergenic	novelGene_28645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	60914448	60914646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60914400_60914600
ES.35272.1	chr9	-	183	1	Intergenic	novelGene_28646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAGAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	60953601	60953418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_60953400_60953600
ES.35273.1	chr9	+	182	1	Intergenic	novelGene_28647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTCCTGGTAAC	NA	False	NA	NA	False	NA	NA	NA	60969690	60969872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_60969700_60969900
ES.35274.1	chr9	-	5185	3	Intergenic	novelGene_28648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGGTTGCATCTGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	61156992	61145588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61150578_61150672_61150745_61156868
ES.35274.2	chr9	-	971	1	Intergenic	novelGene_28649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	61157754	61156783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61156800_61157800
ES.35275.1	chr9	-	3220	3	NNC	ENSMUSG00000111658.2	novel	2678	5	NA	NA	186	-18906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTTTCGTCTCCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	61200905	61185414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61188496_61193220_61193295_61200840
ES.35275.2	chr9	-	449	3	NNC	ENSMUSG00000111658.2	novel	2678	5	NA	NA	117	-21449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACAGCTCGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	61200974	61187957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61188199_61193220_61193295_61200840
ES.35276.1	chr9	+	4565	3	Intergenic	novelGene_28650	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	9619	False	NA	NA	False	NA	NA	NA	61209999	61215525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61210146_61210358_61210601_61211348
ES.35276.2	chr9	+	3675	4	Intergenic	novelGene_28651	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	9642	False	NA	NA	False	NA	NA	NA	61210022	61215524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61210146_61210358_61210601_61211348_61211413_61212278
ES.35276.3	chr9	+	3609	3	Intergenic	novelGene_28652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	9922	False	NA	NA	False	NA	NA	NA	61210302	61215525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61210601_61211348_61211413_61212278
ES.35277.1	chr9	-	807	5	Intergenic	novelGene_28653	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAACTCGTACAGACT	NA	False	NA	NA	False	AATAAA	-19	NA	61258149	61221065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61221227_61235089_61235291_61235784_61235869_61237325_61237367_61257829
ES.35278.1	chr9	+	5189	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-53	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.9194889051111	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGTTTTAATTGCC	NA	False	NA	45	True	AAAAAG	-10	NA	61279594	61325778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.11	chr9	+	4790	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.559921246038	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGGATTATTTTAT	NA	False	NA	67	True	NA	NA	NA	61279649	61325419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.13	chr9	+	4475	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	58.9194889051111	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTGATAAGATACCG	NA	False	NA	15	True	AATAAA	-16	NA	61279649	61325119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.14	chr9	+	4520	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	2	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	65.9595835846973	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTCTCCCCTTTCCTGC	NA	False	NA	30	True	AATAAA	-31	NA	61279649	61325134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.15	chr9	+	5146	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.559921246038	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279649	61325763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.16	chr9	+	4983	18	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	74.4865237108893	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61279649	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.19	chr9	+	4500	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.559921246038	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCCTTTGATAAGATAC	NA	False	NA	13	True	AATAAA	-14	NA	61279649	61325117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.2	chr9	+	5205	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.559921246038	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279594	61325779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.20	chr9	+	5165	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.0147552435287	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	37	True	AAAAAG	-2	NA	61279655	61325770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.21	chr9	+	4987	18	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	77.0779051363464	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279658	61325763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.23	chr9	+	5147	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	65.9595835846973	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	37	True	AAAAAG	-2	NA	61279658	61325770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.24	chr9	+	5151	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.9595835846973	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61279659	61325763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.26	chr9	+	5125	19	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.8461102901766	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTGATTGTTGTGTTT	NA	False	NA	37	True	AAAAAG	-2	NA	61279659	61325770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.27	chr9	+	4482	19	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	-5	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.8461102901766	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATACCGTCTCCCCT	NA	False	NA	23	True	AATAAA	-24	NA	61279659	61325127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.29	chr9	+	5150	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.1518634864198	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61279661	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318542_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.3	chr9	+	4557	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-53	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.559921246038	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCGTCTCCCCTTTCC	NA	False	NA	27	True	AATAAA	-28	NA	61279594	61325131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.30	chr9	+	4508	19	NNC	ENSMUSG00000032280.17	novel	3523	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.0147552435287	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTGATAAGATACCG	NA	False	NA	15	True	AATAAA	-16	NA	61279661	61325119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.33	chr9	+	4756	19	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	7	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	61.8461102901766	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATTTTTATGGATTA	NA	False	NA	61	True	NA	NA	NA	61279671	61325413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.34	chr9	+	4445	19	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	70.2049029275145	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCCTTTGATAAGATAC	NA	False	NA	13	True	AATAAA	-14	NA	61279675	61325117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61322003_61322144_61322843_61322921_61323890
ES.35278.37	chr9	+	5088	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	71.8271459052139	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61279682	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316675_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.39	chr9	+	4725	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	55	26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	68.3437435611382	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCATATGGAAGAGAGT	NA	False	NA	36	True	AAGAAA	-43	NA	61279719	61325388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.4	chr9	+	4566	19	NNC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	-52	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.6916200665792	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCGTCTCCCCTTTCCT	NA	False	NA	28	True	AATAAA	-29	NA	61279595	61325132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.40	chr9	+	3582	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	64	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	64.0147552435287	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTCATAAGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	61279728	61324260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.41	chr9	+	4422	19	NNC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	75	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.7288463528063	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCTTTGATAAGATACC	NA	False	NA	14	True	AATAAA	-15	NA	61279739	61325118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321375_61321992_61322144_61322843_61322921_61323890
ES.35278.44	chr9	+	4971	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	154	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.046666086092	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTTGGTTTGATTG	NA	False	NA	29	True	AATGAA	-29	NA	61279818	61325762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281227_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.45	chr9	+	4366	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	157	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	78.0663891256097	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCCTTTGATAAGATA	NA	False	NA	12	True	AATAAA	-13	NA	61279821	61325116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281726_61281861_61282810_61282856_61300488_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.48	chr9	+	4308	19	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.5875805055086	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTTGGTTTGATTGT	NA	False	NA	30	True	AATGAA	-30	NA	61280469	61325763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314619_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.49	chr9	+	2713	19	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.559921246038	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCCTCATAAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	61280565	61324258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.5	chr9	+	5242	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.653725595817	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGTTTTAATTGCC	NA	False	NA	45	True	AAAAAG	-10	NA	61279595	61325778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.50	chr9	+	3586	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162973.8	4114	20	-125	653	73	0	multi-exon	FALSE	canonical	3	64	junction_12	44.235268765659	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTGATAAGATACCG	NA	False	NA	15	True	AATAAA	-16	NA	61280573	61325119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.51	chr9	+	4077	19	NNC	ENSMUSG00000032280.17	novel	2836	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4146449413914	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61280765	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280789_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.52	chr9	+	4022	18	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-58	44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.9268121937869	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATATTGCATTTTTA	NA	False	NA	54	True	NA	NA	NA	61280895	61325406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.53	chr9	+	3736	18	NNC	ENSMUSG00000032280.17	novel	2836	19	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	61.2133373078111	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCCTTTGATAAGATAC	NA	False	NA	13	True	AATAAA	-14	NA	61280901	61325117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.54	chr9	+	4375	18	NNC	ENSMUSG00000032280.17	novel	4065	19	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	67.0590299274429	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGTTTTAATTGCC	NA	False	NA	45	True	AAAAAG	-10	NA	61280920	61325778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.55	chr9	+	4344	18	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	60.417234416455	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGATTGTTGTGTTTT	NA	False	NA	38	True	AAAAAG	-3	NA	61280923	61325771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.56	chr9	+	3698	18	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	63.4813543722972	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCCTTTGATAAGATAC	NA	False	NA	13	True	AATAAA	-14	NA	61280924	61325117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.57	chr9	+	3733	18	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.7115432813385	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCCTTTGATAAGATA	NA	False	NA	12	True	AATAAA	-13	NA	61280924	61325116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.59	chr9	+	4342	18	NNC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.0008775833064	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGATTGTTGTGTT	NA	False	NA	36	True	AAAAAG	-1	NA	61280929	61325769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.6	chr9	+	5201	19	NNC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.6916200665792	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGTTTTAATTGCC	NA	False	NA	45	True	AAAAAG	-10	NA	61279606	61325778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.61	chr9	+	3790	18	NNC	ENSMUSG00000032280.17	novel	4065	19	NA	NA	146	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	66.3297831928336	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAGAGAGTTTTTATAT	NA	False	NA	44	True	NA	NA	NA	61281099	61325396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.62	chr9	+	4389	17	NNC	ENSMUSG00000032280.17	novel	4299	20	NA	NA	-265	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.7091583741556	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTTGGTTTGATTG	NA	False	NA	29	True	AATGAA	-29	NA	61281345	61325762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.63	chr9	+	3766	17	NNC	ENSMUSG00000032280.17	novel	2836	19	NA	NA	-262	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.0960329577066	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCGTCTCCCCTTTCCTG	NA	False	NA	29	True	AATAAA	-30	NA	61281348	61325133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.64	chr9	+	4150	17	NNC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	65.4269630962648	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61281584	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.65	chr9	+	4138	17	NNC	ENSMUSG00000032280.17	novel	2836	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.0960329577066	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGATTGTTGTGTT	NA	False	NA	36	True	AAAAAG	-1	NA	61281612	61325769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.69	chr9	+	3328	16	NNC	ENSMUSG00000032280.17	novel	8638	11	NA	NA	-9438	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.5809580797372	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATACCGTCTCCCCTTTCC	NA	False	NA	27	True	AATAAA	-28	NA	61299702	61325131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61299836_61300484_61300548_61301889_61301965_61309137_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.7	chr9	+	4540	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	66.653725595817	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGATACCGTCTCCCCTT	NA	False	NA	24	True	AATAAA	-25	NA	61279647	61325128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.70	chr9	+	2302	15	NNC	ENSMUSG00000032280.17	novel	2836	19	NA	NA	-8622	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.3863366517793	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTCATAAGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	61300518	61324260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.71	chr9	+	4553	14	ISM	ENSMUSG00000032280.17	ENSMUST00000162583.8	4299	20	27789	0	-851	0	3prime_fragment	FALSE	canonical	3	105	junction_6	37.7329451266263	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61308289	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.72	chr9	+	3636	11	NIC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	-2816	0	intron_retention	FALSE	canonical	0	0	junction_10	73.3659321483752	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61314402	61325768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61323890
ES.35278.73	chr9	+	3034	8	ISM	ENSMUSG00000032280.17	ENSMUST00000162973.8	4114	20	36517	1	-3	-1	3prime_fragment	FALSE	canonical	3	127	junction_1	34.7427866540638	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGATTGTTGTGTTTT	NA	False	NA	38	True	AAAAAG	-3	NA	61317215	61325771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35278.9	chr9	+	4785	19	NNC	ENSMUSG00000032280.17	novel	5205	20	NA	NA	0	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.6916200665792	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTTTATATTGCATTT	NA	False	NA	51	True	NA	NA	NA	61279647	61325403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309342_61314631_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ES.35279.1	chr9	-	3039	17	Antisense	novelGene_ENSMUSG00000032280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCGGACCTGCGGATA	NA	False	NA	NA	False	NA	NA	NA	61322079	61279739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_61280743_61281233_61281334_61281794_61281860_61282809_61282852_61300480_61300546_61301887_61301963_61309132_61309352_61314632_61314756_61315561_61315611_61316045_61316201_61316556_61316688_61317215_61317418_61318544_61318622_61319546_61319794_61320133_61320383_61321222_61321370_61321989
ES.35279.2	chr9	-	3041	17	Antisense	novelGene_ENSMUSG00000032280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCGGACCTGCGGATA	NA	False	NA	NA	False	NA	NA	NA	61322079	61279739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_61280745_61281238_61281334_61281794_61281860_61282809_61282852_61300480_61300546_61301887_61301963_61309132_61309348_61314631_61314756_61315561_61315611_61316045_61316201_61316556_61316697_61317215_61317418_61318544_61318621_61319546_61319794_61320133_61320383_61321222_61321370_61321989
ES.35279.3	chr9	-	1985	11	Antisense	novelGene_ENSMUSG00000032280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCGGACCTGCGGATA	NA	False	NA	NA	False	NA	NA	NA	61316614	61279739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_61280743_61281233_61281334_61281794_61281860_61282810_61282852_61300480_61300546_61301887_61301995_61309132_61309352_61314632_61314756_61315561_61315611_61316045_61316201_61316556
ES.35279.4	chr9	-	2334	5	Antisense	novelGene_ENSMUSG00000032280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTCGGACCTGCGGATA	NA	False	NA	NA	False	NA	NA	NA	61301604	61279739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_61280743_61281233_61281334_61281794_61281860_61282809_61282852_61300480
ES.3528.1	chr10	+	179	1	Intergenic	novelGene_2701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAACTGTTATGTAAA	269	False	NA	NA	False	NA	NA	NA	88201496	88201675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_88201500_88201700
ES.35280.1	chr9	-	183	1	Intergenic	novelGene_28654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAAGTCAGAGG	NA	False	NA	NA	False	NA	NA	NA	61648059	61647876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61647900_61648100
ES.35281.1	chr9	+	122	1	Intergenic	novelGene_28655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCCACACA	NA	False	NA	NA	False	NA	NA	NA	61679417	61679539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61679400_61679500
ES.35282.1	chr9	+	350	2	Intergenic	novelGene_28656	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGCCTGGTTTCTAA	NA	False	NA	NA	False	AATAAA	-19	NA	61761797	61767595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61761909_61767356
ES.35283.1	chr9	+	221	1	Intergenic	novelGene_28659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACGAGCGGGATGCTTG	NA	False	NA	NA	False	NA	NA	NA	61781192	61781413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61781200_61781400
ES.35284.1	chr9	-	2716	5	Intergenic	novelGene_28657	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.707106781186548	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACACACACACATGGAT	NA	False	NA	NA	False	NA	NA	NA	61776830	61766278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61768313_61774097_61774263_61776076_61776255_61776385_61776551_61776656
ES.35284.2	chr9	-	1917	3	Intergenic	novelGene_28658	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCCTAGGTCTGAGTGT	NA	False	NA	NA	False	NA	NA	NA	61785265	61766751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61768313_61774097_61774263_61785074
ES.35285.1	chr9	+	160	1	Intergenic	novelGene_28660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	61786713	61786873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61786700_61786900
ES.35286.1	chr9	-	2727	2	NIC	ENSMUSG00000007892.9	novel	499	3	NA	NA	3	1865	intron_retention	FALSE	canonical	3	11557	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGCTGTAATTGGCCT	NA	False	NA	NA	False	NA	NA	NA	61821821	61818700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61821245_61821638
ES.35286.2	chr9	-	1462	1	Genic_Genomic	ENSMUSG00000007892.9	novel	NA	NA	NA	NA	1180	1383	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGGAGATGGGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	61820644	61819182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_61819200_61820600
ES.35286.3	chr9	-	561	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	-56	-6	-56	6	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTCTCACTTGTAAGCC	NA	False	NA	-22	True	AATAAA	-20	NA	61821880	61820559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61820804_61821169_61821245_61821638
ES.35286.7	chr9	-	440	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6124	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	False	NA	-28	True	AATAAA	-14	NA	61821771	61820565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61820804_61821169_61821245_61821644
ES.35287.1	chr9	+	188	1	Intergenic	novelGene_28661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTGAAGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61850425	61850613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61850400_61850600
ES.35288.1	chr9	-	2854	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.931636211252	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854017	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826973_61827156_61827240_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837042_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.10	chr9	-	8116	16	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	6	3	intron_retention	FALSE	canonical	0	0	junction_9	71.342803109743	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854050	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.11	chr9	-	3475	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854088	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.12	chr9	-	3117	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-28	3	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854084	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.13	chr9	-	6016	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	5	3	intron_retention	FALSE	canonical	3	153	junction_5	34.2558070618737	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854013	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.14	chr9	-	4184	23	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9250921015287	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854017	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61825313_61825710_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.15	chr9	-	5391	17	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	22	3	intron_retention	FALSE	non_canonical	0	0	junction_11	92.4636541769251	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61853996	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839355_61839470_61842661_61842833_61843944_61844818_61851484_61851614_61852626_61852702_61853893
ES.35288.16	chr9	-	3467	18	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-15	3	intron_retention	TRUE	non_canonical	0	0	junction_11	74.053426893035	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854071	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834916_61836945_61837164_61842448_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.17	chr9	-	3095	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	80.8771290291637	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854049	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826893_61826976_61827156_61827240_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.18	chr9	-	3186	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-55	3	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854111	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.19	chr9	-	7567	21	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	6	3	intron_retention	FALSE	canonical	3	9	junction_20	86.0367799257968	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854050	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852698_61853893
ES.35288.20	chr9	-	3182	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	62.7010326959117	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854065	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.22	chr9	-	6094	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	7	3	intron_retention	FALSE	canonical	3	50	junction_16	68.8460373551313	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854049	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.24	chr9	-	2898	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-14	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	90.419729594818	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854070	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.26	chr9	-	4223	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	3	intron_retention	FALSE	canonical	3	138	junction_3	42.6805283472452	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854056	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.27	chr9	-	8019	2	NIC	ENSMUSG00000032254.11	novel	2987	13	NA	NA	164	3	intron_retention	FALSE	canonical	3	268	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61832735	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61832094_61832251
ES.35288.28	chr9	-	3331	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-14	1	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	65.825509739206	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGGTGGCCATTC	NA	False	NA	-2	True	AATAAA	-19	NA	61854070	61824560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.29	chr9	-	5430	13	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	658	0	intron_retention	FALSE	canonical	3	228	junction_11	27.5585235856753	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61839162	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082
ES.35288.3	chr9	-	3021	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-1391	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	66.7482833736819	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61855447	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61855352
ES.35288.30	chr9	-	2872	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	62.4615681839641	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854070	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.32	chr9	-	2848	20	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	87.7593978520668	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854057	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852698_61853893
ES.35288.35	chr9	-	3071	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	66.7482833736819	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854047	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853899
ES.35288.36	chr9	-	3994	23	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.8699726680975	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854017	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61825543_61826253_61826893_61826973_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.38	chr9	-	4259	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_13	86.9873971115117	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839200_61839354_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.39	chr9	-	3830	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_14	73.5092511184817	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.4	chr9	-	6602	20	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-26	3	intron_retention	FALSE	canonical	3	11	junction_3	65.8665653585563	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854082	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826973_61827156_61827240_61828300_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.42	chr9	-	3932	21	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-14	0	intron_retention	FALSE	canonical	3	138	junction_5	43.9304848596052	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854070	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.43	chr9	-	6165	3	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-708	0	intron_retention	FALSE	canonical	0	0	junction_2	160.5	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61834678	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61831460_61834191
ES.35288.44	chr9	-	3027	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	97.03680018204	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854040	61824561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839200_61839354_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.46	chr9	-	3382	23	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.7331297040387	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTTGTGTGGTGGCCAT	NA	False	NA	-4	True	AATAAA	-17	NA	61854047	61824562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832964_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.47	chr9	-	3127	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-1403	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	66.7482833736819	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTTGTGTGGTGGCCAT	NA	False	NA	-4	True	AATAAA	-17	NA	61855459	61824562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61855254
ES.35288.49	chr9	-	3175	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	86.0387509594756	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGTGTGGTGGCCA	NA	False	NA	-5	True	AATAAA	-16	NA	61853961	61824563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839355_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.5	chr9	-	4916	6	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-64	3	intron_retention	FALSE	canonical	3	242	junction_5	30.0998338865848	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61832963	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61832426_61832811
ES.35288.52	chr9	-	3302	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-2	98	-2	-98	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTAGGAAGGTATTTA	NA	False	NA	-101	True	AATAAA	-25	NA	61854058	61824659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.53	chr9	-	2936	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	-14	47	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTTTAGACATATTTAA	NA	False	NA	NA	False	NA	NA	NA	61854070	61824725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.54	chr9	-	3590	18	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	7	5562	7	9	5prime_fragment	FALSE	canonical	3	153	junction_1	32.9683711276382	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTAAAATAGTCTTGCA	NA	False	NA	NA	False	AATAAA	-26	NA	61854049	61830123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.55	chr9	-	3743	16	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	-520	intron_retention	FALSE	canonical	0	0	junction_3	72.1025812452108	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTCCCTAATGGCT	NA	False	NA	NA	False	NA	NA	NA	61854017	61830652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61831499_61831913_61832094_61832251_61832426_61832617_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.56	chr9	-	2183	16	ISM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-15	7564	-15	0	5prime_fragment	FALSE	canonical	3	228	junction_6	22.0860941670445	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGACTGAGTTGTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	61854071	61832125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.57	chr9	-	6681	1	FSM	ENSMUSG00000032254.11	ENSMUST00000215404.2	2349	1	-37	-4295	0	4295	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAAAATACATACATAGA	NA	False	NA	NA	False	NA	NA	NA	61854056	61847375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61847400_61854100
ES.35288.6	chr9	-	7677	19	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	1	3	intron_retention	FALSE	canonical	3	228	junction_9	25.620930872344	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61854017	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61824962_61826181_61826253_61826893_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35288.7	chr9	-	3803	20	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	66	3	intron_retention	FALSE	canonical	3	9	junction_19	66.909207925839	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61853952	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61824962_61826181_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852698_61853893
ES.35288.8	chr9	-	4367	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	-966	-3	-966	3	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGGCCATTCAC	NA	False	NA	0	True	AATAAA	-21	NA	61855022	61824558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ES.35289.1	chr9	-	2322	6	NIC	ENSMUSG00000032278.12	novel	3566	8	NA	NA	30	-904	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.18747549010185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTCGGACGTGCACA	NA	False	NA	NA	False	NA	NA	NA	61934053	61861923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61863570_61868810_61868953_61871009_61871107_61879907_61880114_61896274_61896421_61933968
ES.35289.2	chr9	-	2203	6	NIC	ENSMUSG00000032278.12	novel	3566	8	NA	NA	-4	-1033	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTCCCTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	61934142	61862052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61863570_61868810_61868953_61871009_61871107_61876062_61876190_61896274_61896421_61933968
ES.35289.3	chr9	-	1237	8	FSM	ENSMUSG00000032278.12	ENSMUST00000034817.11	3566	8	31	2298	-24	10	multi-exon	FALSE	canonical	1	1	junction_5	2.96922995583236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTTTGGTGTTAGC	NA	False	NA	NA	False	NA	NA	NA	61934107	61863317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61863570_61868810_61868953_61871009_61871107_61876062_61876190_61879907_61880114_61883353_61883482_61896274_61896421_61933968
ES.35289.4	chr9	-	177	1	Intergenic	novelGene_28662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAAAGAAAACGCTT	7089	False	NA	NA	False	NA	NA	NA	61913334	61913157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61913200_61913300
ES.3529.1	chr10	+	5436	21	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-45	4	intron_retention	FALSE	canonical	2	9	junction_12	52.1003598835939	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88214948	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.10	chr10	+	5302	22	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	52.4112899159866	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215013	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215177_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.11	chr10	+	4716	22	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	20	-567	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.8812587730597	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215013	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215159_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.12	chr10	+	4699	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	26	-567	intron_retention	FALSE	canonical	3	18	junction_15	49.5912290632124	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215019	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.13	chr10	+	5818	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	27	580	intron_retention	FALSE	canonical	0	0	junction_15	68.1447372540206	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTTGTGGAATC	NA	False	NA	NA	False	AATAGA	-17	NA	88215020	88283771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272251_88272381_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.14	chr10	+	5270	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	29	-2	intron_retention	FALSE	canonical	3	18	junction_15	49.5912290632124	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTATTGTTAGTATTT	NA	False	NA	20	True	CATAAA	-22	NA	88215022	88283189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.16	chr10	+	4787	20	FSM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	-59	569	33	-569	multi-exon	FALSE	canonical	0	0	junction_1	54.8253838534801	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215026	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.17	chr10	+	4319	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	41	-952	intron_retention	FALSE	non_canonical	0	0	junction_5	53.4566179251924	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCCTATCTAAATTATT	NA	False	NA	NA	False	AATATA	-14	NA	88215034	88282230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.18	chr10	+	4768	21	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-43	-570	intron_retention	FALSE	canonical	2	9	junction_12	52.1003598835939	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215042	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.19	chr10	+	4869	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-41	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	69.1474155653346	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTATTGTTAGTATTT	NA	False	NA	20	True	CATAAA	-22	NA	88215044	88283189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281991_88282071_88282265
ES.3529.2	chr10	+	4646	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-20	-566	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	69.499208628588	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGTCAAATAGTCTTC	NA	False	NA	9	True	AGTAAA	-18	NA	88214973	88282616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215331_88236566_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.20	chr10	+	5129	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-33	-17	intron_retention	FALSE	canonical	3	11	junction_9	65.8726802248094	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACACACTTATTGAA	NA	False	NA	-4	True	NA	NA	NA	88215052	88283165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.22	chr10	+	4496	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-31	-572	intron_retention	FALSE	non_canonical	0	0	junction_5	67.5447999478864	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCATCTTTGTCAAATA	NA	False	NA	3	True	AGTAAA	-12	NA	88215054	88282610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.23	chr10	+	6005	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	-32	-583	-30	583	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATTTGTGGAATCATT	NA	False	NA	NA	False	AATAGA	-20	NA	88215055	88283774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.24	chr10	+	5327	20	FSM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	-29	-1	-29	1	multi-exon	FALSE	canonical	0	0	junction_1	54.8253838534801	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215056	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.25	chr10	+	4852	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-29	-570	intron_retention	FALSE	canonical	2	5	junction_3	52.5138077080685	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215056	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247908_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.27	chr10	+	4661	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-10	-569	intron_retention	FALSE	non_canonical	0	0	junction_5	53.4566179251924	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215075	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.28	chr10	+	4571	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-8	-570	intron_retention	FALSE	non_canonical	0	0	junction_5	69.1462941884813	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215077	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.29	chr10	+	5502	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_20	53.7804797301028	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215078	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281513
ES.3529.30	chr10	+	5245	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	68.0175047497404	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGAGTTTATTGTTAG	NA	False	NA	15	True	CATAAA	-17	NA	88215081	88283184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215177_88215330_88215398_88236513_88236600_88247777_88247908_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.31	chr10	+	5228	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-4	4	intron_retention	FALSE	non_canonical	0	0	junction_5	53.4566179251924	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215081	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.32	chr10	+	3331	15	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	1	-5	intron_retention	FALSE	canonical	2	9	junction_12	60.2303401746248	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTGCAATGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	88215086	88272586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213
ES.3529.34	chr10	+	3794	19	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	1	-320	intron_retention	FALSE	canonical	2	9	junction_12	54.6207180427553	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAATGGGCATTTCGA	NA	False	NA	NA	False	ATTAAA	-11	NA	88215088	88276404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085
ES.3529.35	chr10	+	5346	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	1	4	intron_retention	FALSE	canonical	1	4	junction_9	52.5627957780025	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215088	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265739_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.36	chr10	+	5620	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	1	4	intron_retention	FALSE	canonical	3	179	junction_8	23.8391423742817	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215088	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.37	chr10	+	5206	22	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.8812587730597	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215094	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215159_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.38	chr10	+	4459	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	7	924	7	-915	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTCTTGAATCGCTAA	NA	False	NA	NA	False	NA	NA	NA	88215094	88282267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.39	chr10	+	3961	20	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	8	0	intron_retention	FALSE	canonical	3	5	junction_19	69.801856486594	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGTCCGAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88215095	88276724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276089_88276254_88276483
ES.3529.4	chr10	+	4908	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	-92	574	2	-565	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTCAAATAGTCTTCC	NA	False	NA	10	True	AGTAAA	-19	NA	88214995	88282617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.40	chr10	+	4650	22	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	8	-569	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	52.4112899159866	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215095	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215177_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.41	chr10	+	3969	18	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	8	-567	intron_retention	FALSE	non_canonical	0	0	junction_5	74.5383949273064	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215095	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.42	chr10	+	5126	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	8	4	intron_retention	FALSE	non_canonical	0	0	junction_5	69.6630999884444	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215095	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.43	chr10	+	3900	16	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	10	-567	intron_retention	FALSE	non_canonical	0	0	junction_5	78.4388225873444	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215097	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88281624
ES.3529.44	chr10	+	3777	16	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	10	-570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.6704410979063	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215097	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215331_88236566_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88281624
ES.3529.45	chr10	+	4748	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	10	-570	intron_retention	FALSE	non_canonical	0	0	junction_9	52.6032943451617	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215097	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265368_88265420_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.46	chr10	+	4766	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	10	-567	intron_retention	FALSE	canonical	1	4	junction_9	52.5627957780025	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215097	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265739_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.47	chr10	+	10238	19	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	15	4	intron_retention	FALSE	canonical	1	1	junction_9	82.817906008034	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215102	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268104_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276089_88276254_88279170_88279262_88281624
ES.3529.48	chr10	+	4677	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	15	-569	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	51.9423719134966	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215102	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215331_88236566_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.49	chr10	+	4381	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	15	-995	intron_retention	FALSE	canonical	2	5	junction_3	52.5138077080685	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATAGATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	88215102	88282187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247908_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.5	chr10	+	5540	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	-92	-58	2	58	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGATGCCTGGTGTTTTT	NA	False	NA	80	True	NA	NA	NA	88214995	88283249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.50	chr10	+	5011	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	64.7652310070171	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215103	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215159_88215330_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.51	chr10	+	4623	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	17	-570	intron_retention	FALSE	non_canonical	0	0	junction_4	80.4256799784745	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215104	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247908_88248466_88248490_88250328_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.52	chr10	+	4721	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	17	-556	intron_retention	FALSE	canonical	3	11	junction_9	51.1677632890084	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCTTCCTTGCTAACA	NA	False	NA	19	True	AGTAAA	-28	NA	88215104	88282626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.53	chr10	+	5195	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	19	4	intron_retention	FALSE	non_canonical	0	0	junction_5	83.5347083552699	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215106	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265331_88265503_88265700_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.54	chr10	+	5330	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	20	1	intron_retention	FALSE	non_canonical	0	0	junction_15	53.1249470587972	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215107	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272418_88273312_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.55	chr10	+	6501	20	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	22	-566	intron_retention	FALSE	canonical	1	4	junction_8	53.3676943789415	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGTCAAATAGTCTTC	NA	False	NA	9	True	AGTAAA	-18	NA	88215109	88282616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265739_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.56	chr10	+	6169	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	22	4	intron_retention	FALSE	canonical	3	179	junction_8	23.7881927927174	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215109	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.57	chr10	+	4781	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	22	-569	intron_retention	FALSE	canonical	0	0	junction_8	53.9007421099191	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215109	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265331_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.58	chr10	+	5276	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	22	4	intron_retention	FALSE	canonical	3	11	junction_9	51.1677632890084	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215109	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.59	chr10	+	4464	16	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	23	4	intron_retention	FALSE	non_canonical	0	0	junction_5	79.2499842271278	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215110	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272255_88281622
ES.3529.6	chr10	+	4874	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	4	-567	intron_retention	FALSE	canonical	2	5	junction_11	51.2498536583276	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88214997	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268332_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.60	chr10	+	7685	18	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	24	1	intron_retention	FALSE	canonical	3	182	junction_5	22.5277990514787	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215111	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.61	chr10	+	4223	16	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	24	-566	intron_retention	FALSE	canonical	0	0	junction_2	59.8050908275281	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGTCAAATAGTCTTC	NA	False	NA	9	True	AGTAAA	-18	NA	88215111	88282616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.62	chr10	+	5367	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	25	1	intron_retention	FALSE	canonical	2	5	junction_3	52.5138077080685	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215112	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247908_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.63	chr10	+	5602	19	NNC	ENSMUSG00000035311.17	novel	5297	20	NA	NA	25	-567	intron_retention	FALSE	canonical	0	0	junction_1	83.7696724637942	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215112	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88265503_88265701_88265873_88267194_88267478_88268302_88268507_88268976_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.64	chr10	+	5477	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	25	1	intron_retention	FALSE	canonical	0	0	junction_7	80.715929186808	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215112	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88258609_88258818_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.65	chr10	+	3862	19	NIC	ENSMUSG00000035311.17	novel	5297	20	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_1	73.192204266794	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGTCCGAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88215112	88276724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88276483
ES.3529.66	chr10	+	4046	16	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	25	-569	intron_retention	FALSE	canonical	1	5	junction_15	59.1017954230007	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215112	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88281624
ES.3529.67	chr10	+	4563	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	25	-554	intron_retention	FALSE	canonical	0	0	junction_9	53.3631661354534	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTCCTTGCTAACATT	NA	False	NA	21	True	AGTAAA	-30	NA	88215112	88282628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265853_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.68	chr10	+	6365	19	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	25	4	intron_retention	FALSE	canonical	3	182	junction_5	21.9641261949155	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215112	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.69	chr10	+	4271	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	26	-949	intron_retention	FALSE	non_canonical	0	0	junction_13	53.8223698846493	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTATCTAAATTATTGAT	NA	False	NA	NA	False	AATATA	-17	NA	88215113	88282233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269819_88271866_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.70	chr10	+	4565	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	26	-569	intron_retention	FALSE	canonical	1	4	junction_9	66.900878170619	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215113	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265739_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.71	chr10	+	4080	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	27	1221	intron_retention	FALSE	non_canonical	0	0	junction_20	53.7804797301028	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTTAAGTATTTCTA	NA	False	NA	NA	False	NA	NA	NA	88215114	88284412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88284128
ES.3529.72	chr10	+	4793	16	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_2	59.8050908275281	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGTTAGTATTTTT	NA	False	NA	22	True	CATAAA	-24	NA	88215116	88283191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.73	chr10	+	4149	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	31	-1114	intron_retention	FALSE	canonical	3	11	junction_9	51.1677632890084	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATAATTTCTGGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	88215118	88282068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.74	chr10	+	1073	5	NNC	ENSMUSG00000035311.17	novel	686	6	NA	NA	33	462	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	101.203693114431	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGACTCTGTGAGA	NA	False	NA	NA	False	AATAAA	-11	NA	88215120	88250922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215331_88236566_88236600_88247777_88247898_88248466_88248509_88250254
ES.3529.75	chr10	+	5006	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	34	4	intron_retention	FALSE	non_canonical	0	0	junction_5	80.597441026375	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215121	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265700_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.78	chr10	+	1186	5	ISM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	40	32269	40	462	5prime_fragment	FALSE	canonical	3	212	junction_1	13.8811923119017	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGACTCTGTGAGA	NA	False	NA	NA	False	AATAAA	-11	NA	88215127	88250922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254
ES.3529.79	chr10	+	5318	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	44	1	intron_retention	FALSE	non_canonical	0	0	junction_20	53.7804797301028	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215131	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279242_88281624
ES.3529.8	chr10	+	4635	18	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	7	4	intron_retention	FALSE	non_canonical	0	0	junction_5	74.5383949273064	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215000	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265416_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.80	chr10	+	4077	19	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	44	6	intron_retention	FALSE	canonical	2	9	junction_12	54.6207180427553	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCGAGCCGGGCGGTGG	NA	False	NA	NA	False	NA	NA	NA	88215131	88276730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085
ES.3529.81	chr10	+	4697	22	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	45	-567	intron_retention	FALSE	non_canonical	0	0	junction_21	52.6032943451617	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215132	88282615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624_88282164_88282235
ES.3529.82	chr10	+	6321	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	45	1	intron_retention	FALSE	canonical	3	179	junction_9	21.1362811835826	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215132	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.83	chr10	+	5570	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	45	-572	intron_retention	FALSE	canonical	3	179	junction_8	23.7881927927174	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCATCTTTGTCAAATA	NA	False	NA	3	True	AGTAAA	-12	NA	88215132	88282610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.84	chr10	+	3844	19	ISM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	45	6781	45	-314	5prime_fragment	FALSE	canonical	3	179	junction_9	23.5062376801679	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCATTTCGAGAGATT	NA	False	NA	NA	False	ATTAAA	-17	NA	88215132	88276410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085
ES.3529.85	chr10	+	5326	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	45	4	intron_retention	FALSE	canonical	0	0	junction_8	53.9007421099191	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215132	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264503_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.87	chr10	+	1108	6	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	46	462	intron_retention	FALSE	canonical	2	2	junction_5	94.3207294289013	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATGACTCTGTGAGA	NA	False	NA	NA	False	AATAAA	-11	NA	88215133	88250922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88250532
ES.3529.88	chr10	+	4576	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	46	-570	intron_retention	FALSE	non_canonical	0	0	junction_5	70.063471224312	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88215133	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272424_88273312_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.9	chr10	+	5497	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	19	-71	intron_retention	FALSE	canonical	0	0	junction_4	69.0927637310884	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATTGTGTTTGTGCTG	NA	False	NA	-58	True	NA	NA	NA	88215012	88283111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248709_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.90	chr10	+	4157	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	46	-995	intron_retention	FALSE	canonical	3	18	junction_15	49.5912290632124	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATAGATCTTATTT	NA	False	NA	NA	False	NA	NA	NA	88215133	88282187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.91	chr10	+	5296	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	47	1	intron_retention	FALSE	non_canonical	0	0	junction_5	70.7675596583632	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88215134	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250444_88255005_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271866_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.92	chr10	+	5861	20	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	47	4	intron_retention	FALSE	non_canonical	0	0	junction_5	71.2626525675934	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215134	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215331_88236566_88236600_88247777_88247898_88248466_88248509_88250254_88250298_88254986_88255052_88255287_88255423_88264354_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.93	chr10	+	5182	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	83	4	intron_retention	FALSE	non_canonical	0	0	junction_4	53.3089814196445	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTTTATTGTTAGTA	NA	False	NA	17	True	CATAAA	-19	NA	88215170	88283186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248487_88250352_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.94	chr10	+	4686	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	105	-569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	53.7804797301028	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88215192	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279273_88281656
ES.3529.95	chr10	+	4938	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	21440	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4403825940774	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88236527	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88236600_88247766_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88272381_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.96	chr10	+	6029	18	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	-18289	1	intron_retention	FALSE	canonical	3	179	junction_7	24.1927095884656	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	False	NA	14	True	CATAAA	-16	NA	88247138	88283183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.97	chr10	+	4428	18	NNC	ENSMUSG00000035311.17	novel	1856	8	NA	NA	-16893	-569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.6702963760512	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTTTGTCAAATAGTC	NA	False	NA	6	True	AGTAAA	-15	NA	88248534	88282613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88248709_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.98	chr10	+	3336	11	ISM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	52107	570	1765	-570	3prime_fragment	FALSE	canonical	3	194	junction_9	20.6312869205971	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88267192	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.3529.99	chr10	+	1817	5	ISM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	59519	570	2699	-570	3prime_fragment	FALSE	canonical	3	194	junction_3	14.3527000944073	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTTGTCAAATAGT	NA	False	NA	5	True	AGTAAA	-14	NA	88274604	88282612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ES.35290.1	chr9	+	179	1	Intergenic	novelGene_28663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5056	False	NA	NA	False	NA	NA	NA	61952057	61952236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_61952100_61952200
ES.35291.1	chr9	-	185	1	Intergenic	novelGene_28664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTGTTTTAAGGGC	9481	False	NA	NA	False	NA	NA	NA	61955678	61955493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_61955500_61955700
ES.35292.1	chr9	-	4997	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	-143	-4	-98	4	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATATTTCTCTTCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	62030035	61964525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
ES.35292.10	chr9	-	5761	6	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	-46	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.8823076567489	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGTACTTGGATA	NA	False	NA	NA	False	AATAAA	-13	NA	62029983	61964537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61968318_61975666_61975913_61977296_61977896_61988479_61989308_61995710_61995802_62029766
ES.35292.11	chr9	-	540	1	Genic_Genomic	ENSMUSG00000032252.15	novel	NA	NA	NA	NA	-10016	3	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATATGGTGTCTGTTTCT	2588	False	NA	NA	False	AATAAA	-17	NA	61988138	61987598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_61987600_61988100
ES.35292.12	chr9	-	1434	3	FSM	ENSMUSG00000032252.15	ENSMUST00000185510.2	1922	3	-52	540	-6	-540	multi-exon	FALSE	canonical	3	22	junction_1	70	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTTATGAGCTTATT	NA	False	NA	NA	False	ATTAAA	-29	NA	62029943	61988141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_61989308_61995710_61995802_62029766
ES.35292.2	chr9	-	4847	5	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	63.6646487463804	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029942	61964529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61968318_61975666_61975860_61977296_61977896_61995710_61995802_62029766
ES.35292.3	chr9	-	8656	1	NIC	ENSMUSG00000032252.15	novel	4626	3	NA	NA	4703	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	3402	False	NA	NA	False	AATAAA	-21	NA	61973185	61964529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61964500_61973200
ES.35292.4	chr9	-	4433	5	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	70.4166173569847	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029958	61964529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61968318_61975666_61975913_61977296_61977413_61995710_61995802_62029766
ES.35292.5	chr9	-	4849	4	NIC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_3	71.2101740546173	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029982	61964529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61968318_61975666_61975913_61977296_61977896_62029766
ES.35292.6	chr9	-	5056	6	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	77.1787535530343	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029928	61964529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62008687_62008858_62029766
ES.35292.7	chr9	-	4907	5	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.784082460988	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTACTTGGATATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	62029933	61964533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995822_62029766
ES.35292.9	chr9	-	4322	2	NIC	ENSMUSG00000032252.15	novel	4626	3	NA	NA	50	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGTACTTGGATA	NA	False	NA	NA	False	AATAAA	-13	NA	61977838	61964537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_61968318_61977296
ES.35293.1	chr9	+	353	1	Intergenic	novelGene_28666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACATTTCAGTTCCCA	NA	False	NA	NA	False	AATAAA	-16	NA	62068845	62069198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62068800_62069200
ES.35294.1	chr9	-	1683	6	Intergenic	novelGene_28665	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAGCCAAGCCTCTT	NA	False	NA	NA	False	AAGAAA	-23	NA	62078360	62039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62040331_62050192_62050272_62053148_62054017_62055254_62055311_62077780_62077881_62078212
ES.35295.1	chr9	-	1767	3	Intergenic	novelGene_28667	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTTTGTCGAGGGT	499	False	NA	NA	False	NA	NA	NA	62122183	62118363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62119571_62120056_62120390_62121956
ES.35296.1	chr9	+	769	4	NNC	ENSMUSG00000110826.2	novel	403	2	NA	NA	-10422	-2176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTATTTTTAAAGGAGA	NA	False	NA	NA	False	AATAAA	-16	NA	62138529	62149103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62138653_62142087_62142419_62142968_62143132_62148951
ES.35297.1	chr9	-	1990	1	FSM	ENSMUSG00002076714.1	ENSMUST00020183390.1	105	1	-758	-1127	-758	1127	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATTTGCCTAGATCTG	NA	False	NA	NA	False	AAAAAG	-35	NA	62150907	62148917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62148900_62150900
ES.35298.1	chr9	-	1825	2	FSM	ENSMUSG00000046846.5	ENSMUST00000056949.5	3042	2	-302	1519	-302	-1519	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTAGTTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	62189792	62179529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62180846_62189283
ES.35299.1	chr9	+	178	1	Intergenic	novelGene_28668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAATAAGTATTGCT	NA	False	NA	NA	False	NA	NA	NA	62196337	62196515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62196300_62196500
ES.353.1	chr1	+	178	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTAATCTCT	5333	False	NA	NA	False	NA	NA	NA	39498684	39498862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_39498700_39498900
ES.3530.1	chr10	-	1938	1	Intergenic	novelGene_2702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGACCAAAAACCTAAACA	NA	False	NA	NA	False	NA	NA	NA	88247110	88245172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88245200_88247100
ES.35300.1	chr9	+	195	1	Intergenic	novelGene_28669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	62208628	62208823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62208600_62208800
ES.35301.1	chr9	+	204	1	Intergenic	novelGene_28670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGTTAGTTGAGCA	NA	False	NA	NA	False	NA	NA	NA	62233711	62233915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62233700_62233900
ES.35302.1	chr9	+	1179	7	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	7	111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	204.164489784313	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTGTTTGTTCTTACT	NA	False	NA	17	True	CATAAA	-23	NA	62248617	62285174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282027_62284581_62284646_62284835
ES.35302.11	chr9	+	950	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	48	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	217.635842636272	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTATTTCCCCCCCTC	NA	False	NA	7	True	AATAAA	-18	NA	62248658	62285099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280941_62284584_62284646_62284835
ES.35302.13	chr9	+	719	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	48	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.838945840628	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTATTTCCCCCCCTC	NA	False	NA	7	True	AATAAA	-18	NA	62248658	62285099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62281965_62285053
ES.35302.15	chr9	+	788	6	ISM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	50	1465	50	40	5prime_fragment	FALSE	canonical	3	492	junction_5	28.7986110776197	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGCTGGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	62248660	62284629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581
ES.35302.17	chr9	+	760	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	50	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.838945840628	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTATTTCCCCCCCTC	NA	False	NA	7	True	AATAAA	-18	NA	62248660	62285099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282025_62285070
ES.35302.19	chr9	+	665	5	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	56	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	237.680983673495	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTATTTCCCCCCCTC	NA	False	NA	7	True	AATAAA	-18	NA	62248666	62285099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62285070
ES.35302.2	chr9	+	4913	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	8	35	intron_retention	FALSE	non_canonical	0	0	junction_4	221.430801832085	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTTATTTCCCCCCCT	NA	False	NA	6	True	AATAAA	-17	NA	62248618	62285098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62280960_62281935_62282442_62282485_62284646_62284835
ES.35302.20	chr9	+	1617	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	126	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.838945840628	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGGGAGATGGCTT	NA	False	NA	13	True	AATAAA	-13	NA	62248736	62286082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62281980_62285075
ES.35302.22	chr9	+	1256	7	FSM	ENSMUSG00000032249.15	ENSMUST00000135395.8	924	7	-189	-143	-16	34	multi-exon	FALSE	canonical	3	7	junction_1	197.739517210563	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACTTTATTTCCCCCCC	NA	False	NA	5	True	AATAAA	-16	NA	62249167	62285097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62249534_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ES.35302.23	chr9	+	1861	1	Intergenic	novelGene_28671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTATCCTTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	62252171	62254032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62252200_62254000
ES.35302.24	chr9	+	1727	5	ISM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	30731	12	-1379	-12	3prime_fragment	FALSE	canonical	3	492	junction_3	24.2538656712698	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGGGAGATGGCTT	NA	False	NA	13	True	AATAAA	-13	NA	62279341	62286082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ES.35302.3	chr9	+	2093	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	12	8	12	-8	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGAGATGGCTTCCTT	NA	False	NA	17	True	AATAAA	-17	NA	62248622	62286086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ES.35302.4	chr9	+	1176	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	17	920	17	111	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTGTTTGTTCTTACT	NA	False	NA	17	True	CATAAA	-23	NA	62248627	62285174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ES.35302.6	chr9	+	2526	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	18	-431	18	431	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTAGACTTAACAGCTG	NA	False	NA	NA	False	TATAAA	-11	NA	62248628	62286525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ES.35302.7	chr9	+	749	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	28	38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.838945840628	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTATTTCCCCCCCTCCT	NA	False	NA	9	True	AATAAA	-20	NA	62248638	62285101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62281995_62285075
ES.35302.8	chr9	+	743	6	NNC	ENSMUSG00000032249.15	novel	2113	7	NA	NA	30	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.838945840628	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTATTTCCCCCCCTC	NA	False	NA	7	True	AATAAA	-18	NA	62248640	62285099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62281988_62285070
ES.35303.1	chr9	-	160	1	Intergenic	novelGene_28672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATATATC	NA	False	NA	NA	False	NA	NA	NA	62255262	62255102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62255100_62255300
ES.35304.1	chr9	-	177	1	Intergenic	novelGene_28673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	62306219	62306042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62306000_62306200
ES.35305.1	chr9	+	1795	1	Intergenic	novelGene_28674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTTAAGCTATTGTAA	4809	False	NA	NA	False	NA	NA	NA	62382123	62383918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62382100_62383900
ES.35306.1	chr9	-	3876	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	240	-506	156	506	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAACGTGTGCAGTACC	9598	False	NA	NA	False	ATTAAA	-20	NA	62444086	62326267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.10	chr9	-	3762	11	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	-8	4233	-8	1858	5prime_fragment	FALSE	canonical	3	53	junction_10	4.47325384926901	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9350	False	NA	NA	False	NA	NA	NA	62444334	62331006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.11	chr9	-	5927	9	NIC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	-12	1811	intron_retention	FALSE	canonical	3	53	junction_8	4.63680924774785	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAGGAAAGAA	9346	False	NA	NA	False	NA	NA	NA	62444338	62331053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62333213_62333422_62333514_62333812_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.12	chr9	-	3578	11	ISM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	68	4341	-16	1750	5prime_fragment	FALSE	canonical	3	53	junction_10	4.47325384926901	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	9426	False	NA	NA	False	NA	NA	NA	62444258	62331114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.13	chr9	-	4695	10	NIC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	159	1750	intron_retention	FALSE	canonical	3	53	junction_9	4.4165793143004	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	9601	False	NA	NA	False	NA	NA	NA	62444083	62331114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62333213_62333422_62333514_62333812_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.14	chr9	-	3310	11	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	12621	1750	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	16.056151469141	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	62405159	62331114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62405103
ES.35306.15	chr9	-	4164	4	NNC	ENSMUSG00000041729.16	novel	1872	3	NA	NA	-21	3733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9786236911983	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTGTCATTTGGTGT	9421	False	NA	NA	False	NA	NA	NA	62444263	62356831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62360349_62361810_62361928_62396522_62396724_62443934
ES.35306.16	chr9	-	3875	4	NNC	ENSMUSG00000041729.16	novel	1872	3	NA	NA	12633	3732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8506650928211	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTCATTTGGTG	NA	False	NA	NA	False	NA	NA	NA	62405147	62356832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62360346_62361810_62361928_62396522_62396724_62405103
ES.35306.17	chr9	-	3763	4	NNC	ENSMUSG00000041729.16	novel	1872	3	NA	NA	166	3522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9786236911983	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTATGTGGTTTTTTT	9608	False	NA	NA	False	NA	NA	NA	62444076	62357042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62360346_62361810_62361928_62396522_62396724_62443934
ES.35306.18	chr9	-	173	1	Intergenic	novelGene_28675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62385663	62385490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62385500_62385700
ES.35306.2	chr9	-	3832	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	-194	-28	-194	28	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGTGGCCATGTCATTTAG	9164	False	NA	21	True	NA	NA	NA	62444520	62326745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ES.35306.3	chr9	-	3365	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	10403	24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	17.8399681280522	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTATCGTGGCCATGTCAT	NA	False	NA	17	True	AATAAA	-43	NA	62407377	62326749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62407254
ES.35306.5	chr9	-	3275	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	12620	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	15.3332135580422	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	NA	False	NA	-7	True	AATAAA	-19	NA	62405160	62326773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62405103
ES.35306.6	chr9	-	3387	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	6319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.119894550256	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	NA	False	NA	-7	True	AATAAA	-19	NA	62411461	62326773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62411292
ES.35306.7	chr9	-	3335	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	223	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	17.5602857711267	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATGTATCAAGCCATG	8279	False	NA	-9	True	AATAAA	-17	NA	62427495	62326775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62427376
ES.35306.8	chr9	-	3856	12	NNC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	-2825	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.119894550256	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCATGTATCAAGCCAT	5231	False	NA	-10	True	AATAAA	-16	NA	62430543	62326776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62429902
ES.35306.9	chr9	-	3393	1	NIC	ENSMUSG00000041729.16	novel	3610	12	NA	NA	5113	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCCATGTATCAAGCCA	NA	False	NA	-11	True	AATAAA	-15	NA	62330170	62326777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62326800_62330200
ES.35307.1	chr9	+	175	1	Intergenic	novelGene_28676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGATACACAACAA	NA	False	NA	NA	False	NA	NA	NA	62482946	62483121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62482900_62483100
ES.35308.1	chr9	+	210	2	Intergenic	novelGene_28677	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTATGAGGTGATATGT	NA	False	NA	NA	False	TTTAAA	-11	NA	62525726	62621141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62525754_62620958
ES.35308.2	chr9	+	188	1	Intergenic	novelGene_28678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGATTGCAATAGT	NA	False	NA	NA	False	AATAAA	-11	NA	62525729	62525917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62525700_62525900
ES.35308.3	chr9	+	1750	5	Intergenic	novelGene_28679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.278719262151	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGAGCTCTCTGCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	62557009	62562877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62557281_62557826_62557945_62560928_62560991_62561475_62561641_62561743
ES.35308.4	chr9	+	4938	30	FSM	ENSMUSG00000032243.9	ENSMUST00000034774.9	4969	30	31	0	-3	0	multi-exon	TRUE	canonical	0	0	junction_4	0.724958484194091	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCAAGGCTGCATTCTG	NA	False	NA	NA	False	TTTAAA	-32	NA	62585138	62691264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62585279_62604165_62604278_62634887_62634989_62637992_62638085_62639363_62639479_62642550_62642679_62644650_62644800_62651207_62651353_62651763_62651930_62653187_62653259_62658786_62658932_62659525_62659675_62662453_62662595_62662851_62663056_62664886_62665018_62667569_62667737_62668812_62668956_62670088_62670200_62673041_62673128_62674877_62675086_62675808_62675908_62676528_62676606_62678626_62678717_62680241_62680333_62681358_62681473_62681579_62681667_62683894_62684006_62684135_62684232_62689217_62689332_62689909
ES.35308.5	chr9	+	212	1	Intergenic	novelGene_28680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGAGGTGATATGTGT	NA	False	NA	NA	False	TTTAAA	-13	NA	62620931	62621143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62620900_62621100
ES.35308.6	chr9	+	3753	21	NNC	ENSMUSG00000032243.9	novel	4969	30	NA	NA	73194	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.804673846971554	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGGTATTTAAAAACAACC	NA	False	NA	NA	False	AATATA	-18	NA	62658335	62691220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62658414_62658786_62658932_62659525_62659675_62662453_62662595_62662851_62663056_62664886_62665018_62667569_62667737_62668812_62668956_62670088_62670200_62673041_62673128_62674877_62675086_62675808_62675908_62676528_62676606_62678626_62678717_62680241_62680333_62681358_62681473_62681579_62681667_62683894_62684006_62684135_62684232_62689217_62689332_62689909
ES.35308.7	chr9	+	2829	2	Genic_Genomic	ENSMUSG00000032243.9	novel	4969	30	NA	NA	94144	-2201	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1430	False	NA	NA	False	NA	NA	NA	62679285	62682192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_62679352_62679429
ES.35309.1	chr9	-	160	1	Intergenic	novelGene_28681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	62696533	62696373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62696400_62696500
ES.3531.1	chr10	+	2953	1	Genic_Genomic	ENSMUSG00000020059.10	novel	NA	NA	NA	NA	-167	-10881	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88295263	88298216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_88295300_88298200
ES.3531.2	chr10	+	1153	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	-14	0	-14	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295416	88309097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ES.3531.3	chr10	+	926	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	1	0	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295525	88309097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ES.3531.4	chr10	+	1051	7	ISM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	intron_retention	FALSE	canonical	3	14	junction_4	41.5869236926972	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537
ES.3531.5	chr10	+	1768	8	NIC	ENSMUSG00000020059.10	novel	1139	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	104	junction_4	7.74333156163866	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295527	88309097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88303245_88305407_88305507_88308537_88308643_88308766
ES.3531.7	chr10	+	1166	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	2	1	2	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295527	88309097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
ES.35310.1	chr9	+	194	1	Intergenic	novelGene_28682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACATCT	NA	False	NA	NA	False	NA	NA	NA	62697892	62698086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62697900_62698100
ES.35311.1	chr9	+	7946	1	Antisense	novelGene_ENSMUSG00000032244.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAACCAGATATAGG	NA	False	NA	NA	False	NA	NA	NA	62698687	62706633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_62698700_62706600
ES.35311.2	chr9	+	2477	2	Antisense	novelGene_ENSMUSG00000032244.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGAGTGGGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	62703411	62719218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_62705010_62718339
ES.35311.3	chr9	+	5031	1	Intergenic	novelGene_28684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTTTAAAGCCCACACC	NA	False	NA	NA	False	NA	NA	NA	62712174	62717205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62712200_62717200
ES.35311.4	chr9	+	183	1	Intergenic	novelGene_28685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACTGATCTTTCTAGC	NA	False	NA	NA	False	NA	NA	NA	62714811	62714994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62714800_62715000
ES.35312.1	chr9	-	3080	1	Genic_Genomic	ENSMUSG00000032244.10	novel	NA	NA	NA	NA	17365	331	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATGGTCTTAAAGTCT	NA	False	NA	NA	False	AATATA	-18	NA	62701851	62698771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_62698800_62701900
ES.35312.11	chr9	-	4760	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-2	2027	-2	-2027	multi-exon	FALSE	canonical	3	242	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTCCTCATGCCTGGC	NA	False	NA	NA	False	TATAAA	-14	NA	62719218	62701129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.12	chr9	-	3295	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	334	3156	334	-3156	multi-exon	FALSE	canonical	3	242	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGATTTTTTTTTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	62718882	62702258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.13	chr9	-	3304	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-2	3483	-2	-3483	multi-exon	FALSE	canonical	3	242	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTCTAGCCCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	62719218	62702585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.14	chr9	-	3095	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-2	3692	-2	-3692	multi-exon	FALSE	canonical	3	242	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTTCTGTTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	62719218	62702794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.15	chr9	-	2623	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-48	4210	-48	-4210	multi-exon	FALSE	canonical	3	242	junction_1	0	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAATTCTGTGTTTGTA	NA	False	NA	NA	False	AGTAAA	-18	NA	62719264	62703312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.16	chr9	-	178	1	Intergenic	novelGene_28683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	62709621	62709443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62709400_62709600
ES.35312.2	chr9	-	4181	1	Genic_Genomic	ENSMUSG00000032244.10	novel	NA	NA	NA	NA	16122	189	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACATTTTCTGTGTTAC	NA	False	NA	NA	False	CATAAA	-19	NA	62703094	62698913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_62698900_62703100
ES.35312.3	chr9	-	7660	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	-874	-1	-874	1	multi-exon	FALSE	canonical	3	242	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAGTTTGTGTCTTTAT	NA	False	NA	-4	True	AGTAAA	-19	NA	62720090	62699101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62705011_62718339
ES.35312.4	chr9	-	6690	3	NNC	ENSMUSG00000032244.10	novel	6785	2	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGAAGTTTGTGTCT	NA	False	NA	-8	True	AGTAAA	-15	NA	62719218	62699105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62703729_62703822_62705011_62718339
ES.35312.5	chr9	-	5904	3	NNC	ENSMUSG00000032244.10	novel	6785	2	NA	NA	317	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGAAGTTTGTGTCT	NA	False	NA	-8	True	AGTAAA	-15	NA	62718899	62699105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62702436_62702996_62705011_62718339
ES.35312.6	chr9	-	6050	3	NNC	ENSMUSG00000032244.10	novel	6785	2	NA	NA	333	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGAAGTTTGTGTCT	NA	False	NA	-8	True	AGTAAA	-15	NA	62718883	62699105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62701076_62701474_62705011_62718339
ES.35312.7	chr9	-	5992	2	NNC	ENSMUSG00000032244.10	novel	6785	2	NA	NA	-6630	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGAAGTTTGTGTCT	NA	False	NA	-8	True	AGTAAA	-15	NA	62725846	62699105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62705011_62725759
ES.35312.8	chr9	-	6504	3	NNC	ENSMUSG00000032244.10	novel	6785	2	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTACCTTGAAGT	NA	False	NA	-16	True	AGTAAA	-7	NA	62719220	62699113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62704979_62718377_62718428_62718631
ES.35313.1	chr9	-	183	1	Intergenic	novelGene_28686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAAAGAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62727411	62727228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62727200_62727400
ES.35314.1	chr9	-	176	1	Intergenic	novelGene_28687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	62731931	62731755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62731800_62731900
ES.35315.1	chr9	+	156	1	Intergenic	novelGene_28688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	62740168	62740324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62740200_62740300
ES.35316.1	chr9	+	2308	7	NNC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-180	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.4258035902098	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCCGTGGCTGTTTCTA	NA	False	NA	12	True	AATAAA	-20	NA	62745886	62759287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756501_62757898
ES.35316.2	chr9	+	2255	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	-117	4	-117	-4	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	False	NA	9	True	AATAAA	-17	NA	62745949	62759284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ES.35316.3	chr9	+	2300	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-55	-4	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	False	NA	9	True	AATAAA	-17	NA	62746011	62759284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ES.35316.4	chr9	+	2201	8	NNC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-19	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	27.5888176104533	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	False	NA	9	True	AATAAA	-17	NA	62746047	62759284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62746237_62747182_62747227_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ES.35316.5	chr9	+	1412	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	-3	11	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCTGGCCTTATGGAG	NA	False	NA	NA	False	NA	NA	NA	62746070	62758455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ES.35316.6	chr9	+	3487	8	NNC	ENSMUSG00000032245.13	novel	560	5	NA	NA	353	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5888176104533	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAGCCCAGCATGGGC	NA	False	NA	-2	True	AATAAA	-6	NA	62746426	62759273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_62747874_62750331_62750415_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ES.35317.1	chr9	-	221	1	Intergenic	novelGene_28689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAAGGACGCCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	62760328	62760107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62760100_62760300
ES.35318.1	chr9	+	767	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10573	8	10543	-1	3prime_fragment	FALSE	canonical	3	41	junction_1	28	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCATGTGGAATTGGT	3024	False	NA	1	True	AATAAA	-13	NA	62775958	62783195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_62776100_62778547_62778737_62782758
ES.35318.3	chr9	+	732	2	ISM	ENSMUSG00000032246.15	ENSMUST00000215870.2	803	4	10555	0	10553	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGGGTTTTTGTTTG	3034	False	NA	NA	False	NA	NA	NA	62775968	62779148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_62776100_62778547
ES.35318.4	chr9	+	4740	1	NIC	ENSMUSG00000032246.15	novel	710	3	NA	NA	13042	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTGGAATTGGTGT	5523	False	NA	3	True	AATAAA	-15	NA	62778457	62783197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_62778500_62783200
ES.35318.5	chr9	+	513	2	ISM	ENSMUSG00000032246.15	ENSMUST00000215968.2	526	4	13044	-68	13044	68	3prime_fragment	FALSE	canonical	3	97	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTGTAATAAGGTCTG	5525	False	NA	NA	False	AATAAA	-20	NA	62778459	62782994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_62778737_62782758
ES.35319.1	chr9	-	4082	1	Antisense	novelGene_ENSMUSG00000032246.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9958	False	NA	NA	False	NA	NA	NA	62780917	62776835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_62776800_62780900
ES.3532.1	chr10	-	6795	9	NNC	ENSMUSG00000060002.15	novel	4863	9	NA	NA	12	-26	intron_retention	TRUE	non_canonical	0	0	junction_1	64.1847918123912	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATTAAAAAAAAAACGTAA	4107	False	NA	NA	False	AAAAAG	-10	NA	88339849	88305401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88306001_88306397_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.10	chr10	-	8169	6	NIC	ENSMUSG00000060002.15	novel	3898	8	NA	NA	-4	-641	intron_retention	FALSE	canonical	3	126	junction_2	39.9319421015307	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCTGTAAGGTTCTTT	4120	False	NA	NA	False	AATAAA	-16	NA	88339836	88309341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88311399_88312209_88312336_88312871_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.11	chr10	-	3109	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	-18	807	11	-785	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGTGTTTTTAAAATTA	4106	False	NA	NA	False	ATTAAA	-20	NA	88339850	88309485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.12	chr10	-	2817	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	30	1051	-15	-1029	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATCAAGCTTCAGTATA	4154	False	NA	NA	False	ATTAAA	-26	NA	88339802	88309729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.13	chr10	-	1577	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	-5	2326	-5	-2304	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGTCTAAATAGCATTA	4119	False	NA	NA	False	AATAAA	-35	NA	88339837	88311004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.14	chr10	-	1116	4	FSM	ENSMUSG00000060002.15	ENSMUST00000117579.8	1043	4	-66	-7	-14	7	multi-exon	FALSE	canonical	2	4	junction_1	100.223084499863	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCTTAGCTCTGAAC	4110	False	NA	NA	False	NA	NA	NA	88339846	88321447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88321874_88324243_88324386_88325442_88325591_88339446
ES.3532.15	chr10	-	942	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	-111	21	37	-21	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAATTAAAAAAAA	4058	False	NA	NA	False	NA	NA	NA	88339898	88322924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
ES.3532.16	chr10	-	1987	3	ISM	ENSMUSG00000060002.15	ENSMUST00000117579.8	1043	4	-47	1473	5	-24	5prime_fragment	FALSE	canonical	3	203	junction_2	12.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGAAAAATTAAAAA	4129	False	NA	NA	False	NA	NA	NA	88339827	88322927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88324386_88325442_88325591_88339446
ES.3532.17	chr10	-	883	4	NNC	ENSMUSG00000060002.15	novel	852	4	NA	NA	6	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.099080418103	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATGAAAAATTAAAA	4130	False	NA	NA	False	NA	NA	NA	88339826	88322928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88323142_88324243_88324386_88325442_88325591_88339446
ES.3532.2	chr10	-	3560	9	FSM	ENSMUSG00000060002.15	ENSMUST00000139109.8	1447	9	-73	-2040	8	-1285	multi-exon	FALSE	canonical	0	0	junction_1	64.1847918123912	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATATGGAGGAGTTAAAA	4132	False	NA	NA	False	NA	NA	NA	88339824	88306660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.3	chr10	-	3428	8	NIC	ENSMUSG00000060002.15	novel	1447	9	NA	NA	8	-1285	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.7215281505755	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATATGGAGGAGTTAAAA	4132	False	NA	NA	False	NA	NA	NA	88339824	88306660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.4	chr10	-	3468	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	109	1286	6	-1286	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATATGGAGGAGTTAAA	4130	False	NA	NA	False	NA	NA	NA	88339826	88306661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.5	chr10	-	1475	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	87	3301	13	2	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATATTTCTGCAATAT	4108	False	NA	-5	True	AATAAA	-20	NA	88339848	88308676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.6	chr10	-	1547	9	FSM	ENSMUSG00000060002.15	ENSMUST00000139109.8	1447	9	-76	-24	5	2	multi-exon	FALSE	canonical	0	0	junction_1	64.1847918123912	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATATTTCTGCAATAT	4129	False	NA	-5	True	AATAAA	-20	NA	88339827	88308676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.7	chr10	-	1411	8	NIC	ENSMUSG00000060002.15	novel	1447	9	NA	NA	8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.7215281505755	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCATATTTCTGCAATA	4132	False	NA	-6	True	AATAAA	-19	NA	88339824	88308677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.8	chr10	-	1319	8	NIC	ENSMUSG00000060002.15	novel	4863	9	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	68.6166517542148	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTCATATTTCTGCAA	4129	False	NA	-8	True	AATAAA	-17	NA	88339827	88308679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.3532.9	chr10	-	3257	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	-22	663	7	-641	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCTGTAAGGTTCTTT	4102	False	NA	NA	False	AATAAA	-16	NA	88339854	88309341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ES.35320.1	chr9	-	6053	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	1	-490	1	490	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCATGGCTCTCGCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	62888160	62785159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.10	chr9	-	5063	1	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	3957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	6208	False	NA	0	True	AATAAA	-17	NA	62790712	62785649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62785600_62790700
ES.35320.12	chr9	-	5345	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-3	222	1	-103	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGATTCATTGCCTTAA	NA	False	NA	NA	False	TATAAA	-36	NA	62888164	62785871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.13	chr9	-	5126	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-3	441	1	-322	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGACTCTTAAAGCACA	NA	False	NA	NA	False	AATACA	-17	NA	62888164	62786090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.14	chr9	-	4120	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-326	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTCAGGACTCTTAAAG	NA	False	NA	NA	False	AATACA	-13	NA	62888160	62786094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.15	chr9	-	3472	14	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-2	-371	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.0279094267565	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTTTTAAAGCAGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	62888167	62786139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.16	chr9	-	3420	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-920	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	38.8825689309061	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGTTGTTGTCGTTTTTC	NA	False	NA	NA	False	ATTAAA	-24	NA	62888160	62786688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.17	chr9	-	4544	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-24	1044	-20	-925	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCCCGTTGTTGTCGT	NA	False	NA	NA	False	ATTAAA	-19	NA	62888185	62786693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.18	chr9	-	3904	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-38	1698	-34	-1579	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTATGTTTTTAAATTCA	NA	False	NA	3	True	AATAAA	-33	NA	62888199	62787347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.19	chr9	-	3789	15	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-1586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.5650082586185	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAATAGTTATGTTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	62888164	62787354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62789417_62789489_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.2	chr9	-	4121	15	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0987572779277	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888160	62785647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62787936_62788381_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.20	chr9	-	2861	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	-1590	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAATAGTTATGT	NA	False	NA	-8	True	AATAAA	-22	NA	62888165	62787358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.21	chr9	-	2414	15	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-1590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0987572779277	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAATAGTTATGT	NA	False	NA	-8	True	AATAAA	-22	NA	62888164	62787358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62787936_62788381_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.22	chr9	-	6371	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-2	-1590	intron_retention	FALSE	canonical	3	108	junction_10	10.2821312101248	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAATAGTTATGT	NA	False	NA	-8	True	AATAAA	-22	NA	62888167	62787358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.23	chr9	-	2409	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-1592	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	40.6026648003415	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAACCAGAAATAGTTAT	NA	False	NA	-10	True	AATAAA	-20	NA	62888160	62787360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62888129
ES.35320.24	chr9	-	2707	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	-1744	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGTGTGTGTAT	NA	False	NA	NA	False	AAAAAG	-16	NA	62888165	62787512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.25	chr9	-	6125	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-2	-1836	intron_retention	FALSE	canonical	3	108	junction_10	10.2821312101248	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCGTGGCATCTAAAAATA	NA	False	NA	NA	False	AATAAA	-18	NA	62888167	62787604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.26	chr9	-	5654	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-23	2065	intron_retention	FALSE	canonical	3	108	junction_10	10.2821312101248	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCTCCGAGTATACTT	NA	False	NA	NA	False	GATAAA	-38	NA	62888188	62788096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.27	chr9	-	3134	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-18	2448	-14	2064	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTCCGAGTATACT	NA	False	NA	NA	False	GATAAA	-37	NA	62888179	62788097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.28	chr9	-	2093	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	2040	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTTAGTTATTT	NA	False	NA	NA	False	GATAAA	-13	NA	62888160	62788121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.29	chr9	-	2440	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-3	3127	1	1385	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTGTGTGTGCGTA	NA	False	NA	NA	False	TTTAAA	-15	NA	62888164	62788776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.3	chr9	-	5588	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-22	-2	-18	2	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888183	62785647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.30	chr9	-	2231	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-6	3339	-2	1173	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGCACCCACAAACCT	NA	False	NA	NA	False	GATAAA	-42	NA	62888167	62788988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.31	chr9	-	2113	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-18	3469	-14	1043	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	62888179	62789118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.32	chr9	-	2463	14	FSM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	5	24	1	-24	multi-exon	FALSE	canonical	0	0	junction_1	34.5724520083523	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAGTAAAATTAAAG	NA	False	NA	NA	False	NA	NA	NA	62888160	62790185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_62790980_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.33	chr9	-	178	1	Intergenic	novelGene_28690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAAGAAGAAGTTC	3897	False	NA	NA	False	NA	NA	NA	62793023	62792845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62792800_62793000
ES.35320.34	chr9	-	6223	6	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	-18375	intron_retention	FALSE	canonical	3	108	junction_3	13.4699665923862	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	62888160	62808536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62810115_62820031_62820138_62826632_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.35	chr9	-	152	1	Intergenic	novelGene_28691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATGAATAAATA	6504	False	NA	NA	False	NA	NA	NA	62813090	62812938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62812900_62813100
ES.35320.36	chr9	-	178	1	Intergenic	novelGene_28692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACATTATAA	NA	False	NA	NA	False	NA	NA	NA	62827308	62827130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62827100_62827300
ES.35320.37	chr9	-	3244	5	NNC	ENSMUSG00000032405.11	novel	748	3	NA	NA	1	-98	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	49.9017785254193	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGGTTTTGTTTATCAG	NA	False	NA	NA	False	AATAAA	-14	NA	62888164	62827836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62830468_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.38	chr9	-	236	1	Intergenic	novelGene_28693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGTTGTTTGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	62836061	62835825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62835800_62836100
ES.35320.39	chr9	-	2230	1	Intergenic	novelGene_28694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAATAAAAACAACTACT	NA	False	NA	NA	False	NA	NA	NA	62848165	62845935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62845900_62848200
ES.35320.4	chr9	-	4583	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888176	62785647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.40	chr9	-	3225	1	Intergenic	novelGene_28695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACAGTTTAACATCTGG	1965	False	NA	NA	False	NA	NA	NA	62884646	62881421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62881400_62884600
ES.35320.5	chr9	-	5459	13	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	35.1333768184424	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	False	NA	2	True	AATAAA	-19	NA	62888160	62785647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.6	chr9	-	3889	13	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.8490882012815	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	NA	False	NA	0	True	AATAAA	-17	NA	62888185	62785649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35320.9	chr9	-	3960	14	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.0279094267565	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	NA	False	NA	0	True	AATAAA	-17	NA	62888165	62785649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ES.35321.1	chr9	-	177	1	Intergenic	novelGene_28696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	62921916	62921739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62921700_62921900
ES.35322.1	chr9	+	179	1	Intergenic	novelGene_28697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATATAGG	NA	False	NA	NA	False	NA	NA	NA	62962525	62962704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_62962500_62962700
ES.35323.1	chr9	-	227	1	Intergenic	novelGene_28698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTATATATATAGGCA	NA	False	NA	NA	False	AAGAAA	-32	NA	62990802	62990575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62990600_62990800
ES.35324.1	chr9	-	267	1	Intergenic	novelGene_28699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62993346	62993079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_62993100_62993300
ES.35325.1	chr9	-	130	1	Intergenic	novelGene_28700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACTGGAGCAAACAGGG	NA	False	NA	NA	False	AATAAA	-8	NA	63027638	63027508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63027500_63027600
ES.35326.1	chr9	+	180	1	Intergenic	novelGene_28701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATATATTTGTTAAT	6140	False	NA	NA	False	NA	NA	NA	63099576	63099756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63099600_63099800
ES.35327.1	chr9	-	2000	19	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	194	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	21.2446071588376	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63284965	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.10	chr9	-	1977	20	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	190	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	20.4396280140271	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63284969	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63284404
ES.35327.11	chr9	-	1951	20	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	199	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	26.0688413155366	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	False	NA	-3	True	AATAAA	-16	NA	63284960	63071051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
ES.35327.13	chr9	-	1930	20	NNC	ENSMUSG00000058444.9	novel	1294	11	NA	NA	-3	16193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6180989419001	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGCTGCGTGTCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	63285162	63107359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63107533_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.14	chr9	-	4095	1	Intergenic	novelGene_28702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGATGCTGCGTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	63111458	63107363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63107400_63111500
ES.35327.15	chr9	-	6346	2	Intergenic	novelGene_28703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCTGTGGTATTATAA	NA	False	NA	NA	False	TATAAA	-23	NA	63121911	63114668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63118331_63119227
ES.35327.16	chr9	-	4767	20	NNC	ENSMUSG00000058444.9	novel	1294	11	NA	NA	200	2573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6180989419001	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGGTCTGTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	63284959	63120979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63124193_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.17	chr9	-	3247	20	NNC	ENSMUSG00000058444.9	novel	1294	11	NA	NA	218	2571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6180989419001	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTCTGGTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	63284941	63120981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63122693_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.18	chr9	-	4873	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	195	49936	170	2567	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGACTCTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	63284989	63120985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.19	chr9	-	4822	18	NNC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	215	2566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.6533424324785	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGAGACTCTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	63284944	63120986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63124308_63124620_63124659_63164244_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.2	chr9	-	2309	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	0	1	0	-1	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63285184	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.20	chr9	-	2524	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	1	52479	1	24	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCCTCCTAGTGAAGT	NA	False	NA	NA	False	NA	NA	NA	63285183	63123528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.21	chr9	-	2057	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	47	52900	22	-397	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGACACTGAAAAAAGCA	NA	False	NA	NA	False	ATTAAA	-20	NA	63285137	63123949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.22	chr9	-	1672	19	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	209	53123	184	-620	5prime_fragment	FALSE	canonical	3	66	junction_16	8.30309328050043	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTTGTGTAGCATGC	NA	False	NA	NA	False	AATGAA	-22	NA	63284975	63124172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.23	chr9	-	6769	1	Intergenic	novelGene_28704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGAATGTGTCATAGAG	8381	False	NA	NA	False	NA	NA	NA	63140799	63134030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63134000_63140800
ES.35327.24	chr9	-	2444	1	Intergenic	novelGene_28705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63163057	63160613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63160600_63163100
ES.35327.25	chr9	-	3658	1	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	-19066	21674	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACACTGTGCTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	63229491	63225833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63225800_63229500
ES.35327.26	chr9	-	3674	1	Intergenic	novelGene_28706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63284028	63280354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63280400_63284000
ES.35327.3	chr9	-	2014	20	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	210	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.7081019111975	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63284949	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.4	chr9	-	2323	22	NNC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	28.7722308805082	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63285158	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63238263_63238372_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
ES.35327.5	chr9	-	6786	4	ISM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	154654	1	79895	-1	intron_retention	FALSE	canonical	3	88	junction_1	7.58653778449403	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63130530	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274
ES.35327.6	chr9	-	2189	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	30	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	20.3963231980668	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63285129	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.7	chr9	-	2195	22	NNC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	197	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.3181005593501	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63284962	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63164241_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63238263_63238385_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.8	chr9	-	2422	23	NNC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	297	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.2866214259734	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63284862	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63071473_63087483_63087915_63101479_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ES.35327.9	chr9	-	2235	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	False	NA	-2	True	AATAAA	-17	NA	63285178	63071050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
ES.35328.1	chr9	+	3740	1	Intergenic	novelGene_28707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGATCTGTGTTTGTA	3898	False	NA	NA	False	NA	NA	NA	63285240	63288980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63285200_63289000
ES.35329.1	chr9	-	622	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	-14	-13	-9	13	multi-exon	FALSE	canonical	3	56	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGGTCTTTTTTAAG	NA	False	NA	2	True	AATAAA	-28	NA	63306537	63301715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63301958_63306157
ES.35329.2	chr9	-	4833	1	FSM	ENSMUSG00000032403.9	ENSMUST00000185528.2	1771	1	-23	-3039	-23	10	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGTGGTCTTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	63306551	63301718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63301700_63306600
ES.35329.3	chr9	-	514	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	-31	112	-26	-111	multi-exon	FALSE	canonical	3	56	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTATTGAAAGTGTGCA	NA	False	NA	-123	True	AATAAA	-14	NA	63306554	63301840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63301958_63306157
ES.3533.1	chr10	-	3864	27	NNC	ENSMUSG00000020061.19	novel	3650	27	NA	NA	18509	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1.56704221442026	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAAGTCTCTTGTGCTG	NA	False	NA	NA	False	ATTAAA	-7	NA	88422378	88354150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88354432_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88402369_88402427_88404459_88404512_88406372_88406519_88407381_88407531_88409277_88409392_88421521_88421558_88422117
ES.35330.1	chr9	-	211	1	Intergenic	novelGene_28708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTGACCAGGACAATT	NA	False	NA	NA	False	NA	NA	NA	63325365	63325154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63325200_63325400
ES.35331.1	chr9	+	2631	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	-27	2690	-27	1570	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATGTGTTTTGTTCTGT	9187	False	NA	NA	False	ATTAAA	-23	NA	63509914	63549180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.10	chr9	+	1153	7	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	-3433	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	82.8063336278626	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAACTTGTTATTG	9227	False	NA	NA	False	NA	NA	NA	63509954	63544177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668
ES.35331.11	chr9	+	5057	8	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	1566	intron_retention	FALSE	canonical	0	0	junction_5	132.132432021199	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9227	False	NA	NA	False	ATTAAA	-19	NA	63509954	63549176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63543668_63546427_63546874_63546925_63547488
ES.35331.12	chr9	+	2597	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	14	1561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	121.248138588232	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCTAATGTGTT	9228	False	NA	NA	False	ATTAAA	-14	NA	63509955	63549171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546858_63546925_63547488
ES.35331.13	chr9	+	2895	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	15	2384	15	1876	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATCACAGAGTCTGAA	9229	False	NA	NA	False	NA	NA	NA	63509956	63549486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.14	chr9	+	5583	8	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	15	1563	intron_retention	FALSE	canonical	3	162	junction_6	76.6659863915397	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTAATGTGTTTT	9229	False	NA	NA	False	ATTAAA	-16	NA	63509956	63549173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63546925_63547488
ES.35331.15	chr9	+	6137	8	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	15	1566	intron_retention	FALSE	canonical	3	342	junction_7	24.0577536400239	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9229	False	NA	NA	False	ATTAAA	-19	NA	63509956	63549176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63546427_63546874_63546925_63547488
ES.35331.16	chr9	+	5135	9	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	18	1566	intron_retention	FALSE	canonical	3	162	junction_6	71.9729766995919	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9232	False	NA	NA	False	ATTAAA	-19	NA	63509959	63549176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63546427_63546874_63546925_63547488
ES.35331.18	chr9	+	814	6	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	26	-7861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.44403517132	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGGGCTGAAAGCCCTT	9240	False	NA	NA	False	ATTAAA	-18	NA	63509967	63539749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63539483
ES.35331.2	chr9	+	2435	8	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	-15	1569	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	131.098342896484	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9199	False	NA	NA	False	ATTAAA	-22	NA	63509926	63549179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63546321_63546427_63546874_63546925_63547488
ES.35331.20	chr9	+	2530	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	30	1563	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	119.148936779992	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTAATGTGTTTT	9244	False	NA	NA	False	ATTAAA	-16	NA	63509971	63549173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524330_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.22	chr9	+	6682	7	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	31	1563	intron_retention	FALSE	canonical	3	349	junction_5	23.1618700070228	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTAATGTGTTTT	9245	False	NA	NA	False	ATTAAA	-16	NA	63509972	63549173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63546427_63546874
ES.35331.23	chr9	+	2483	9	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	31	1563	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	121.783362985262	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTAATGTGTTTT	9245	False	NA	NA	False	ATTAAA	-16	NA	63509972	63549173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.24	chr9	+	4232	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	31	1031	31	-1031	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACTTGCTTGGTGTA	9245	False	NA	NA	False	NA	NA	NA	63509972	63550839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.25	chr9	+	3329	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	31	1934	31	-1934	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCATTTT	9245	False	NA	NA	False	NA	NA	NA	63509972	63549936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.26	chr9	+	5686	8	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	32	1567	intron_retention	FALSE	canonical	3	162	junction_6	76.9415362466854	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTAATGTGTTTTGTTC	9246	False	NA	NA	False	ATTAAA	-20	NA	63509973	63549177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63546427_63546874
ES.35331.28	chr9	+	4022	1	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	-777	1569	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	63545157	63549179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63545200_63549200
ES.35331.29	chr9	+	3972	1	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	37953	4	1960	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTAAGTGGAGACATGA	NA	False	NA	NA	False	AATAAA	-13	NA	63547894	63551866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_63547900_63551900
ES.35331.3	chr9	+	2511	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	-12	1561	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	115.904174979928	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCTAATGTGTT	9202	False	NA	NA	False	ATTAAA	-14	NA	63509929	63549171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63524063_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.4	chr9	+	3175	9	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	-11	2694	-11	1566	intron_retention	FALSE	canonical	3	211	junction_6	56.9336236331397	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTAATGTGTTTTGTT	9203	False	NA	NA	False	ATTAAA	-19	NA	63509930	63549176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874
ES.35331.6	chr9	+	1208	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	2	179	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTACAGTCTTCGTTTTA	9216	False	NA	NA	False	NA	NA	NA	63509943	63547789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
ES.35331.7	chr9	+	2654	11	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	3	1561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.479795226329	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGCTAATGTGTT	9217	False	NA	NA	False	ATTAAA	-14	NA	63509944	63549171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546509_63546572_63546874_63546925_63547488
ES.35331.9	chr9	+	2122	6	NIC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	13	1563	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	135.470439580006	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTAATGTGTTTT	9227	False	NA	NA	False	ATTAAA	-16	NA	63509954	63549173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_63510054_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ES.35332.1	chr9	+	1604	1	Antisense	novelGene_ENSMUSG00000032402.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63570360	63571964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_63570400_63572000
ES.35333.1	chr9	+	2883	1	Antisense	novelGene_ENSMUSG00000032402.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGGCATACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	63664696	63667579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_63664700_63667600
ES.35334.1	chr9	+	130	1	Intergenic	novelGene_28710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	5515	False	NA	NA	False	NA	NA	NA	63696307	63696437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63696300_63696400
ES.35335.1	chr9	+	157	1	Intergenic	novelGene_28712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCATTTTTTAAAAA	8798	False	NA	NA	False	NA	NA	NA	63728072	63728229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63728100_63728200
ES.35336.1	chr9	-	5379	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	-288	-1	-288	1	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCTGCTGTCTCTGG	1995	False	NA	-1	True	AATAAA	-41	NA	63665564	63554047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
ES.35336.2	chr9	-	4611	9	NNC	ENSMUSG00000032402.13	novel	5090	9	NA	NA	-692	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.81628111863143	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTGCTGCTGTCTCTG	NA	False	NA	-2	True	AATAAA	-40	NA	63651239	63554048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63651195
ES.35336.3	chr9	-	5050	10	NNC	ENSMUSG00000032402.13	novel	5090	9	NA	NA	-277	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	9.2988782012923	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCCTGCTGCTGTCTCT	2006	False	NA	-3	True	AATAAA	-39	NA	63665553	63554049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753_63664962_63665277
ES.35336.4	chr9	-	4878	10	NNC	ENSMUSG00000032402.13	novel	5090	9	NA	NA	-83051	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.5758369027902	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGATTCCCTGCTGCTG	9853	False	NA	-8	True	AATAAA	-34	NA	63748327	63554054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63686998_63687114_63748125
ES.35336.5	chr9	-	951	3	Intergenic	novelGene_28709	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATGTATCCACTTAGA	5760	False	NA	NA	False	AATAAA	-21	NA	63700663	63680045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63680701_63686998_63687114_63700482
ES.35336.6	chr9	-	240	1	Intergenic	novelGene_28711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTTAGACTTCTGT	NA	False	NA	NA	False	NA	NA	NA	63720376	63720136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63720100_63720400
ES.35336.7	chr9	-	2845	2	Intergenic	novelGene_28713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGTCTTCTATTTTAT	2015	False	NA	NA	False	NA	NA	NA	63743495	63730374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63733103_63743378
ES.35336.8	chr9	-	3169	2	Intergenic	novelGene_28714	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCAAATTTCACAGCAT	9600	False	NA	NA	False	NA	NA	NA	63748580	63730388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63733103_63748125
ES.35337.1	chr9	-	171	1	Intergenic	novelGene_28715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAATATTTCAGA	NA	False	NA	NA	False	NA	NA	NA	63780176	63780005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63780000_63780200
ES.35338.1	chr9	-	185	1	Intergenic	novelGene_28716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTGGAAATGCTC	NA	False	NA	NA	False	NA	NA	NA	63786153	63785968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63786000_63786200
ES.35339.1	chr9	+	167	1	Intergenic	novelGene_28717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTCTGAGCAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	63819754	63819921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63819800_63819900
ES.3534.1	chr10	-	210	1	Intergenic	novelGene_2703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCAAATTAGTAAACAAAA	6701	False	NA	NA	False	ATTAAA	-14	NA	88472788	88472578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88472600_88472800
ES.35340.1	chr9	+	156	1	Intergenic	novelGene_28718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	63839095	63839251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_63839100_63839300
ES.35341.1	chr9	-	3006	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	-36	1	-36	-1	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTCTTTCTTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	63929377	63860358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
ES.35341.10	chr9	-	1873	2	NIC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	638	-298	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGTAATTATGGAGTC	NA	False	NA	NA	False	NA	NA	NA	63928676	63860655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63861339_63927486
ES.35341.2	chr9	-	1362	4	NIC	ENSMUSG00000036867.8	novel	417	5	NA	NA	-92	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	23.4710223230453	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTCTTTCTTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	63924361	63860358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63861339_63914812_63914891_63919496_63919554_63924114
ES.35341.3	chr9	-	2879	5	NNC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	16.7779617355625	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTCTTTCTTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	63929334	63860358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486_63928830_63928913
ES.35341.4	chr9	-	1077	2	NNC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	40882	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTCTTTCTTACAA	NA	False	NA	NA	False	AATAAA	-14	NA	63883387	63860358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63861339_63883290
ES.35341.5	chr9	-	2770	2	NIC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	33	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGTTTTTTTCTTTCT	NA	False	NA	NA	False	AATAAA	-9	NA	63929281	63860363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63861339_63927486
ES.35341.6	chr9	-	2854	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	-49	166	-49	-166	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTTTCCTTTTTTAAAG	NA	False	NA	2	True	AATACA	-22	NA	63929390	63860523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
ES.35341.7	chr9	-	2695	3	NIC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	25	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTTCCTTTTTTAAA	NA	False	NA	1	True	AATACA	-21	NA	63929289	63860524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_63861339_63914812_63914891_63927486
ES.35341.8	chr9	-	1000	4	NNC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	-384	-202	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	22.553639765383	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTTCAATACAGATAT	NA	False	NA	-34	True	AAGAAA	-18	NA	63929725	63860559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_63861339_63914812_63914891_63919496_63919554_63929639
ES.35341.9	chr9	-	2705	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	-22	288	-22	-288	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGAGTCATTTTTACAA	NA	False	NA	-120	True	NA	NA	NA	63929363	63860645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
ES.35342.1	chr9	-	399	1	Intergenic	novelGene_28719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAGCAGCGTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	63959479	63959080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63959100_63959500
ES.35343.1	chr9	-	238	1	Intergenic	novelGene_28720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGAGATAGAGAGGTG	NA	False	NA	NA	False	AAAACA	-3	NA	63977703	63977465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63977500_63977700
ES.35344.1	chr9	-	197	1	Intergenic	novelGene_28721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAGAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	63987297	63987100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_63987100_63987300
ES.35345.1	chr9	-	2170	2	Intergenic	novelGene_28722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTGGTCAGTGT	8557	False	NA	NA	False	NA	NA	NA	64008483	64005878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64007318_64007752
ES.35346.1	chr9	+	176	1	Intergenic	novelGene_28723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	64034774	64034950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64034800_64035000
ES.35347.1	chr9	+	3874	9	NNC	ENSMUSG00000032401.16	novel	1380	10	NA	NA	15893	19958	intron_retention	FALSE	non_canonical	0	0	junction_1	0	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTGGAGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	64045209	64065358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64045344_64047173_64047302_64051364_64051475_64054106_64054203_64054551_64054690_64057419_64057595_64060166_64060244_64060829_64060932_64062444
ES.35347.10	chr9	+	3077	5	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-11	-150	intron_retention	FALSE	canonical	3	16882	junction_3	1167.46445342032	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080645	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64085300_64085504
ES.35347.100	chr9	+	176	2	Intergenic	novelGene_28731	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTTTTATATGTA	4238	False	NA	0	True	NA	NA	NA	64089165	64187296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64089310_64187264
ES.35347.101	chr9	+	176	2	Intergenic	novelGene_28735	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64134623	64152028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64134633_64151861
ES.35347.102	chr9	+	7008	2	Genic_Genomic	ENSMUSG00000035337.4	novel	1162	1	NA	NA	-1057	6381	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTGGAAATCACCTAAA	2150	False	NA	NA	False	NA	NA	NA	64141425	64150025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64147913_64149504
ES.35347.103	chr9	+	5732	2	Genic_Genomic	ENSMUSG00000035337.4	novel	1162	1	NA	NA	-1056	5402	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTCAAAAAAAACAAAAAAAC	2151	False	NA	NA	False	NA	NA	NA	64141426	64149046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64143911_64145798
ES.35347.104	chr9	+	5509	2	Genic_Genomic	ENSMUSG00000035337.4	novel	1162	1	NA	NA	146	6381	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTGGAAATCACCTAAA	3353	False	NA	NA	False	NA	NA	NA	64142628	64150025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64143911_64145798
ES.35347.105	chr9	+	4936	3	Genic_Genomic	ENSMUSG00000035337.4	novel	1162	1	NA	NA	146	6381	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTGGAAATCACCTAAA	3353	False	NA	NA	False	NA	NA	NA	64142628	64150025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64143911_64145798_64148740_64149312
ES.35347.106	chr9	+	7397	1	FSM	ENSMUSG00000035337.4	ENSMUST00000039011.4	1162	1	146	-6381	146	6381	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTGGAAATCACCTAAA	3353	False	NA	NA	False	NA	NA	NA	64142628	64150025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64142600_64150000
ES.35347.107	chr9	+	5192	2	Antisense	novelGene_ENSMUSG00000004936.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCTTATTGATTCTGG	NA	False	NA	NA	False	AAAACA	-12	NA	64150199	64155607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64151851_64152066
ES.35347.108	chr9	+	5159	3	Intergenic	novelGene_28736	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACACCAAAACCAACCA	NA	False	NA	NA	False	NA	NA	NA	64150201	64213980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64151851_64152066_64155510_64213913
ES.35347.109	chr9	+	1852	2	Intergenic	novelGene_28737	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTACCCAGGGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	64150201	64238827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64151999_64238772
ES.35347.11	chr9	+	1376	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-11	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6160.20075630857	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAAACCCTTGTGTGAC	NA	False	NA	30	True	AATAAA	-12	NA	64080645	64085793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082883_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.110	chr9	+	179	1	Intergenic	novelGene_28738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64151850	64152029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64151800_64152000
ES.35347.111	chr9	+	179	2	Antisense	novelGene_ENSMUSG00000004936.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATTAAACAA	NA	False	NA	NA	False	NA	NA	NA	64156142	64183052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64156224_64182954
ES.35347.112	chr9	+	180	2	Intergenic	novelGene_28739	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1416	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	64156143	64287024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64156166_64286866
ES.35347.113	chr9	+	176	2	Intergenic	novelGene_28741	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1416	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	64156144	64287024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64156155_64286858
ES.35347.114	chr9	+	175	1	Intergenic	novelGene_28740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAATTATAAGC	NA	False	NA	NA	False	NA	NA	NA	64156144	64156319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64156100_64156300
ES.35347.115	chr9	+	175	1	Intergenic	novelGene_28742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAATTTTAGA	NA	False	NA	NA	False	NA	NA	NA	64168558	64168733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64168600_64168700
ES.35347.116	chr9	+	1566	3	Intergenic	novelGene_28744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAATCTGGTTTGACTT	1397	False	NA	NA	False	NA	NA	NA	64174800	64179941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64174881_64176949_64177082_64178587
ES.35347.117	chr9	+	177	2	Intergenic	novelGene_28745	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3555	False	NA	NA	False	NA	NA	NA	64182874	64224097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64182894_64223939
ES.35347.118	chr9	+	174	2	Intergenic	novelGene_28746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1404	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAACTTTAAG	3555	False	NA	NA	False	NA	NA	NA	64182874	64287022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64182944_64286917
ES.35347.119	chr9	+	129	1	Intergenic	novelGene_28747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAATAAATTAATAAATA	4396	False	NA	NA	False	NA	NA	NA	64183715	64183844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64183700_64183800
ES.35347.12	chr9	+	1699	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-9	-131	intron_retention	FALSE	canonical	3	17440	junction_1	1299.57868172727	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGGATGTTTCCAAG	NA	False	NA	54	True	AATAAA	-36	NA	64080647	64085817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.120	chr9	+	170	1	Intergenic	novelGene_28749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7157	False	NA	NA	False	NA	NA	NA	64186476	64186646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64186500_64186600
ES.35347.121	chr9	+	191	1	Intergenic	novelGene_28750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTATGGTTGTGTATGT	7799	False	NA	13	True	NA	NA	NA	64187118	64187309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64187100_64187300
ES.35347.122	chr9	+	1103	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-41	-170	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTAAGTCTGTTTAT	9502	False	NA	24	True	AATACA	-27	NA	64188821	64211904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.123	chr9	+	1260	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	-44	625	-22	7	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9521	False	NA	21	True	AATAAA	-21	NA	64188840	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.124	chr9	+	1254	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-15	7	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9528	False	NA	21	True	AATAAA	-21	NA	64188847	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.125	chr9	+	4533	6	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	-15	2786	intron_retention	FALSE	canonical	3	40	junction_4	1066.00536584015	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCAAAACTGGT	9528	False	NA	NA	False	AATAAA	-29	NA	64188847	64215492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188935_64195389_64195526_64197655_64197732_64201291_64201415_64208323_64208531_64211588
ES.35347.128	chr9	+	1059	8	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	1	-162	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTTTATTATTTTTG	9548	False	NA	32	True	AATACA	-35	NA	64188867	64211912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.131	chr9	+	2204	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	6	-2076	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	676.374013069364	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAACTATAGTAAG	9553	False	NA	NA	False	NA	NA	NA	64188872	64209998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323
ES.35347.132	chr9	+	1223	8	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	860.481165822178	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9555	False	NA	21	True	AATAAA	-21	NA	64188874	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188924_64195387_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.134	chr9	+	1240	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	996.278606226436	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9569	False	NA	21	True	AATAAA	-21	NA	64188888	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201269_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.135	chr9	+	3261	6	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	-1	intron_retention	FALSE	canonical	3	410	junction_1	822.0139658181	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTCAGGATTTGAGTT	9569	False	NA	13	True	AATAAA	-13	NA	64188888	64212073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188935_64195395_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.138	chr9	+	1164	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	976.476422696233	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9570	False	NA	14	True	AATAAA	-14	NA	64188889	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208490_64211588
ES.35347.139	chr9	+	2312	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	2	476	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGGGAGGTTAGAGGT	9571	False	NA	NA	False	AATAAA	-13	NA	64188890	64213182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.14	chr9	+	1214	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6084.3234952673	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085213_64085592
ES.35347.140	chr9	+	1140	7	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	3	7	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	1014.70478739166	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9572	False	NA	21	True	AATAAA	-21	NA	64188891	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64208323_64208531_64211588
ES.35347.142	chr9	+	1297	9	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1057.48923605633	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9572	False	NA	14	True	AATAAA	-14	NA	64188891	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188935_64190463_64190553_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.143	chr9	+	1136	7	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	3	7	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	1041.97100887373	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9572	False	NA	21	True	AATAAA	-21	NA	64188891	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188935_64195395_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.144	chr9	+	2016	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	7	-182	3	182	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATACTGCCTCCCCATT	9572	False	NA	NA	False	NA	NA	NA	64188891	64212888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.145	chr9	+	3185	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	972.87610638115	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9572	False	NA	16	True	AATAAA	-16	NA	64188891	64212076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64198286_64199865_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.147	chr9	+	3694	7	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	972.952151387153	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTCAGGATTTGAGTT	9577	False	NA	13	True	AATAAA	-13	NA	64188896	64212073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64198613_64199865_64201669_64208323_64208531_64211588
ES.35347.148	chr9	+	4621	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	8	-3418	8	2786	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCAAAACTGGT	9577	False	NA	NA	False	AATAAA	-29	NA	64188896	64215492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.149	chr9	+	1133	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	978.365544614532	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9578	False	NA	14	True	AATAAA	-14	NA	64188897	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64208323_64208531_64211588
ES.35347.15	chr9	+	1431	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	6006.71232769261	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64084960_64085087_64085178_64085300_64085504
ES.35347.150	chr9	+	1115	9	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	9	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1105.28298836768	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTACTTATTTTAGTAAG	9578	False	NA	15	True	AATACA	-18	NA	64188897	64211895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64205688_64205786_64208323_64208531_64211588
ES.35347.151	chr9	+	1193	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	970.642160675927	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTCAGGATTTGAGTT	9580	False	NA	13	True	AATAAA	-13	NA	64188899	64212073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188935_64195389_64195526_64196997_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.154	chr9	+	946	7	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	14	-176	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	1014.70478739166	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTATTTTAGTAAGTCT	9583	False	NA	18	True	AATACA	-21	NA	64188902	64211898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64208323_64208531_64211588
ES.35347.155	chr9	+	1177	8	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	860.481165822178	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9586	False	NA	14	True	AATAAA	-14	NA	64188905	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188924_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.157	chr9	+	3482	8	NNC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1020.68666362705	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTCAGGATTTGA	9587	False	NA	10	True	AATAAA	-10	NA	64188906	64212070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64198622_64199882_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.158	chr9	+	945	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	19	-174	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	1016.0228699307	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTTAGTAAGTCTGT	9588	False	NA	20	True	AATACA	-23	NA	64188907	64211900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188935_64195389_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.159	chr9	+	637	6	ISM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	22	10265	22	462	5prime_fragment	FALSE	canonical	3	540	junction_1	791.947826564351	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGGTAAGTCCTAGAAT	9591	False	NA	21	True	AATAAA	-14	NA	64188910	64201809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604
ES.35347.162	chr9	+	842	4	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	23	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	1020.76975312207	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTCAGGATTTGA	9592	False	NA	10	True	AATAAA	-10	NA	64188911	64212070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188935_64195395_64195526_64208323_64208531_64211588
ES.35347.163	chr9	+	3497	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	996.278606226436	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGGATTTGAGTTTCT	9592	False	NA	16	True	AATAAA	-16	NA	64188911	64212076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64198613_64199865_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.164	chr9	+	1971	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	23	-783	23	151	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9592	False	NA	NA	False	NA	NA	NA	64188911	64212857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.165	chr9	+	1720	1	NIC	ENSMUSG00000032397.8	novel	352	4	NA	NA	23	-7100	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACAATTCCAAAATTGTC	9592	False	NA	NA	False	AAAACA	-4	NA	64188911	64190631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188900_64190600
ES.35347.166	chr9	+	3239	6	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	24	0	intron_retention	FALSE	canonical	3	673	junction_1	719.32123561035	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9593	False	NA	14	True	AATAAA	-14	NA	64188912	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.168	chr9	+	1104	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	25	-4	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	991.22511177947	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTCAGGATTTGA	9594	False	NA	10	True	AATAAA	-10	NA	64188913	64212070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.169	chr9	+	2210	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	27	472	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	991.22511177947	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGCTGGGAGGTTAG	9596	False	NA	NA	False	AATAAA	-9	NA	64188915	64213178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64188930_64195389_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.17	chr9	+	1379	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6010.40116571594	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080655	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085010_64085087_64085178_64085300_64085504
ES.35347.170	chr9	+	4360	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	30	-3179	30	2547	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTTATATTCTTTTGAG	9599	False	NA	NA	False	NA	NA	NA	64188918	64215253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.171	chr9	+	1335	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	36	-174	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	849.465858582886	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTTAGTAAGTCTGT	9605	False	NA	20	True	AATACA	-23	NA	64188924	64211900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189269_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.172	chr9	+	1506	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	849.465858582886	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9608	False	NA	14	True	AATAAA	-14	NA	64188927	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189269_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.173	chr9	+	1499	8	NNC	ENSMUSG00000032397.8	novel	352	4	NA	NA	47	7	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	848.77756034121	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTGAGTTTCTCACCA	9616	False	NA	21	True	AATAAA	-21	NA	64188935	64212081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189269_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.174	chr9	+	1529	9	NNC	ENSMUSG00000032397.8	novel	352	4	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1054.91959853583	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTCAGGATTTGAGTT	9618	False	NA	13	True	AATAAA	-13	NA	64188937	64212073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189269_64189966_64190007_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.175	chr9	+	1432	7	NNC	ENSMUSG00000032397.8	novel	352	4	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1111.89083197148	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9618	False	NA	14	True	AATAAA	-14	NA	64188937	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189269_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64208323_64208531_64211588
ES.35347.176	chr9	+	1382	8	NNC	ENSMUSG00000032397.8	novel	352	4	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	857.726896262108	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9633	False	NA	14	True	AATAAA	-14	NA	64188952	64212074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64189170_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.177	chr9	+	172	1	Intergenic	novelGene_28751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATCTTAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	64191673	64191845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64191700_64191800
ES.35347.178	chr9	+	2303	7	ISM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	5373	-10	5373	10	3prime_fragment	FALSE	canonical	3	2228	junction_5	165.980671565497	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGTTTCTCACCATGA	NA	False	NA	24	True	AATAAA	-24	NA	64194261	64212084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.179	chr9	+	1027	6	ISM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	8101	4	8101	-4	3prime_fragment	FALSE	canonical	3	2228	junction_4	173.879728548212	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTCAGGATTTGA	NA	False	NA	10	True	AATAAA	-10	NA	64196989	64212070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ES.35347.18	chr9	+	1357	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-152	at_least_one_novel_splicesite	FALSE	canonical	2	841	junction_6	5901.11588317554	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080655	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084323_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.180	chr9	+	167	1	Intergenic	novelGene_28756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	64202643	64202810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64202600_64202800
ES.35347.181	chr9	+	1743	1	FSM	ENSMUSG00000088254.3	ENSMUST00000157629.3	135	1	19	-1627	19	1627	mono-exon	FALSE	NA	NA	NA	NA	NA	519	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGGGGAAATAATACAGG	NA	False	NA	NA	False	NA	NA	NA	64203231	64204974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64203200_64205000
ES.35347.182	chr9	+	153	1	Intergenic	novelGene_28757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	64205229	64205382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64205200_64205400
ES.35347.183	chr9	+	580	2	ISM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	19374	174	19374	-174	3prime_fragment	FALSE	canonical	3	2343	junction_1	0	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTTTAGTAAGTCTGT	NA	False	NA	20	True	AATACA	-23	NA	64208262	64211900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64208531_64211588
ES.35347.184	chr9	+	1669	1	Genic_Genomic	ENSMUSG00000032397.8	novel	NA	NA	NA	NA	22331	182	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATACTGCCTCCCCATT	NA	False	NA	NA	False	NA	NA	NA	64211219	64212888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64211200_64212900
ES.35347.185	chr9	+	2615	1	Genic_Genomic	ENSMUSG00000032397.8	novel	NA	NA	NA	NA	22778	1575	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACACCACTTAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	64211666	64214281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64211700_64214300
ES.35347.186	chr9	+	2933	3	Antisense	novelGene_ENSMUSG00000032396.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAAAACCTAC	NA	False	NA	NA	False	NA	NA	NA	64217339	64222752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64219260_64221213_64221308_64221833
ES.35347.187	chr9	+	218	1	Intergenic	novelGene_28758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAGCTGGGAAGTATA	NA	False	NA	NA	False	AAAAAG	-19	NA	64223919	64224137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64223900_64224100
ES.35347.188	chr9	+	177	2	Antisense	novelGene_ENSMUSG00000032396.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	64223920	64287024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64223946_64286872
ES.35347.189	chr9	+	176	1	Intergenic	novelGene_28759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTTAAGAA	5246	False	NA	NA	False	NA	NA	NA	64286848	64287024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64286800_64287000
ES.35347.19	chr9	+	3477	6	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	16882	junction_2	1359.49122836449	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64085087_64085178
ES.35347.2	chr9	+	178	1	Intergenic	novelGene_28725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGAC	NA	False	NA	NA	False	NA	NA	NA	64047872	64048050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64047900_64048000
ES.35347.20	chr9	+	1314	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6084.3234952673	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080655	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085315_64085592
ES.35347.23	chr9	+	3353	4	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	intron_retention	FALSE	canonical	3	17440	junction_1	978.758737721747	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64085300_64085504
ES.35347.25	chr9	+	4774	2	Fusion	ENSMUSG00000119765.1_ENSMUSG00000064514.3_ENSMUSG00000032399.9	novel	856	4	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	21033	junction_1	0	4062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_64083005_64083373
ES.35347.26	chr9	+	4016	4	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	18488	junction_2	544.57710401946	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083499_64084222_64085300_64085504
ES.35347.27	chr9	+	1350	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	canonical	2	136	junction_1	6117.29299245635	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082144_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.3	chr9	+	178	2	Intergenic	novelGene_28726	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTTTTATATGTA	NA	False	NA	0	True	NA	NA	NA	64047872	64187296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64047971_64187216
ES.35347.30	chr9	+	2291	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	17440	junction_1	1086.74953671743	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.31	chr9	+	1915	8	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	17440	junction_1	1209.22199646496	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64085087_64085178_64085300_64085504
ES.35347.32	chr9	+	1375	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	6095.37274404846	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACAAACCCTTGTGT	NA	False	NA	27	True	AATAAA	-9	NA	64080655	64085790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085081_64085178_64085300_64085504
ES.35347.33	chr9	+	3312	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	18488	junction_3	930.879825756257	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083005_64083373_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.34	chr9	+	2014	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	17440	junction_1	1287.44354784545	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64084760_64085002_64085300_64085504
ES.35347.35	chr9	+	1375	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6123.96480140839	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080655	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082266_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.36	chr9	+	4938	2	Fusion	ENSMUSG00000119388.1_ENSMUSG00000065752.3_ENSMUSG00000032399.9	novel	596	4	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	19805	junction_1	0	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_64085300_64085504
ES.35347.37	chr9	+	1314	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6159.02867722773	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080655	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082178_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.38	chr9	+	1639	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	16882	junction_3	1404.88054986002	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.39	chr9	+	1822	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	17440	junction_1	1299.57868172727	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTTTGTTCCACATG	NA	False	NA	16	True	AATAAA	-13	NA	64080655	64085948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.4	chr9	+	177	1	Intergenic	novelGene_28727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	64050110	64050287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64050100_64050300
ES.35347.40	chr9	+	4606	4	FSM	ENSMUSG00000119388.1_ENSMUSG00000065752.3_ENSMUSG00000032399.9	ENSMUST00000213760.2	596	4	-3761	-249	-1	-147	multi-exon	FALSE	canonical	3	19599	junction_2	572.368956375363	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.41	chr9	+	3434	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	intron_retention	FALSE	canonical	3	17449	junction_3	1084.32320161267	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.42	chr9	+	1379	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6160.20075630857	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082875_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.43	chr9	+	4497	4	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	18963	junction_1	794.296893834765	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64084760_64085002_64085300_64085504
ES.35347.45	chr9	+	3456	4	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	17440	junction_1	1069.62828434305	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64085087_64085178_64085300_64085504
ES.35347.46	chr9	+	2779	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	16882	junction_2	1403.52242144541	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.49	chr9	+	1613	11	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7757.34860696617	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64080972_64081197_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.5	chr9	+	157	2	Antisense	novelGene_ENSMUSG00000032400.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64050112	64077382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64050182_64077294
ES.35347.50	chr9	+	1282	11	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	5844.36803769236	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504_64085597_64085703
ES.35347.51	chr9	+	1168	9	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6276.93498054584	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084708_64085263_64085300_64085504
ES.35347.52	chr9	+	2257	6	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	intron_retention	FALSE	canonical	3	17440	junction_1	1214.24369876891	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64085300_64085504
ES.35347.53	chr9	+	1383	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6159.02867722773	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080655	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082111_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.54	chr9	+	3401	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1	-147	intron_retention	FALSE	canonical	3	16882	junction_2	1245.61934617103	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.55	chr9	+	5146	1	FSM	ENSMUSG00000119388.1	ENSMUST00000083895.3	99	1	-2049	-2998	-2049	2998	mono-exon	FALSE	NA	NA	NA	NA	NA	4062	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080655	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64080700_64085800
ES.35347.57	chr9	+	4035	6	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-150	intron_retention	FALSE	canonical	3	18963	junction_1	792.253898696624	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080656	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083005_64083373_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.58	chr9	+	1382	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6084.3234952673	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080656	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085294_64085504
ES.35347.59	chr9	+	970	7	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7040.97357535795	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080656	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084370_64085577
ES.35347.6	chr9	+	145	1	Intergenic	novelGene_28728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	64077045	64077190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64077000_64077200
ES.35347.60	chr9	+	3153	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-150	intron_retention	FALSE	canonical	3	17449	junction_4	1285.11716932305	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080656	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085300_64085504
ES.35347.61	chr9	+	1395	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-150	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	6148.49757217661	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080656	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082858_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.62	chr9	+	4742	3	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	intron_retention	FALSE	canonical	3	18963	junction_1	421	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64085300_64085504
ES.35347.63	chr9	+	1373	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	1	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6084.3234952673	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080657	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085286_64085504
ES.35347.64	chr9	+	1755	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	2	-150	intron_retention	FALSE	canonical	3	16882	junction_3	1296.80582948065	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080658	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.65	chr9	+	3470	7	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	2	-150	intron_retention	FALSE	canonical	3	12	junction_4	7066.86447836348	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080658	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64082278_64082475_64083499_64084222_64084353_64084602_64084760_64084960_64085087_64085178_64085300_64085504
ES.35347.66	chr9	+	1367	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	4	-152	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	6010.40116571594	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080660	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084745_64085002_64085087_64085178_64085300_64085504
ES.35347.68	chr9	+	3263	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	9	-149	intron_retention	FALSE	canonical	3	16882	junction_2	1277.40200754848	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTGTGTGACTCTTAA	NA	False	NA	36	True	AATAAA	-18	NA	64080665	64085799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64085087_64085178_64085300_64085504
ES.35347.69	chr9	+	1373	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	9	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6123.96480140839	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080665	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082266_64082469_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.7	chr9	+	1560	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-153	131	-153	-131	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGGATGTTTCCAAG	NA	False	NA	54	True	AATAAA	-36	NA	64080503	64085817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.70	chr9	+	1370	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-8	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6139.92890737786	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080666	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084230_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.72	chr9	+	3481	6	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-7	-147	intron_retention	FALSE	canonical	3	16882	junction_2	1343.02157838212	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080667	64085801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083499_64084222_64084760_64085002_64085300_64085504
ES.35347.74	chr9	+	3524	3	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	3	-152	intron_retention	FALSE	canonical	3	17440	junction_1	1182.5	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080677	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64080716_64082105_64085300_64085504
ES.35347.75	chr9	+	3036	8	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	7	-150	intron_retention	FALSE	canonical	3	17449	junction_4	1191.08479110088	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080681	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.76	chr9	+	3496	6	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	8	-150	intron_retention	FALSE	canonical	3	17449	junction_3	1171.71798654796	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080682	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083499_64084222_64084353_64084602_64084760_64085002_64085300_64085504
ES.35347.77	chr9	+	1348	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	10	-155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6160.20075630857	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAAACCCTTGTGTGAC	NA	False	NA	30	True	AATAAA	-12	NA	64080684	64085793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082475_64082576_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.79	chr9	+	1349	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	13	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6123.96480140839	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080687	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080716_64082105_64082278_64082483_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.80	chr9	+	4097	5	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	13	-149	intron_retention	FALSE	canonical	3	18963	junction_1	847.347036343434	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTGTGTGACTCTTAA	NA	False	NA	36	True	AATAAA	-18	NA	64080687	64085799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64083005_64083373_64084760_64085002_64085300_64085504
ES.35347.82	chr9	+	2160	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	35	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6159.02867722773	4062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGTGACTCT	NA	False	NA	33	True	AATAAA	-15	NA	64080709	64085796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64081543_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.83	chr9	+	1523	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	36	-150	at_least_one_novel_splicesite	FALSE	canonical	3	407	junction_1	6034.17045348641	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080710	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080905_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.84	chr9	+	2972	8	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	38	-150	intron_retention	FALSE	canonical	3	16882	junction_2	1335.77462048607	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080712	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.85	chr9	+	1528	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	38	-150	at_least_one_novel_splicesite	FALSE	canonical	3	419	junction_1	6030.49106982258	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080712	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64080912_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.86	chr9	+	4497	4	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	132	-150	intron_retention	FALSE	canonical	3	18963	junction_1	358.375346374285	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080806	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64082278_64082475_64085087_64085178_64085300_64085504
ES.35347.87	chr9	+	4772	2	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	174	148	156	-148	intron_retention	FALSE	canonical	3	18963	junction_1	0	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGTGTGACTCTTAAA	NA	False	NA	37	True	AATAAA	-19	NA	64080830	64085800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64082278_64082475
ES.35347.88	chr9	+	5109	1	FSM	ENSMUSG00000119388.1	ENSMUST00000083895.3	99	1	-1862	-3148	-1862	3148	mono-exon	FALSE	NA	NA	NA	NA	NA	4062	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCCACATGGTA	NA	False	NA	19	True	AATAAA	-16	NA	64080842	64085951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64080800_64086000
ES.35347.89	chr9	+	1799	10	NNC	ENSMUSG00000032399.9	novel	596	4	NA	NA	204	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6157.49403291892	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTGTTCCACATGGT	NA	False	NA	18	True	AATAAA	-15	NA	64080878	64085950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64081197_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.9	chr9	+	1565	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	-12	-15	-12	15	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTAGTCTACTTTATA	NA	False	NA	31	True	AATAAA	-28	NA	64080644	64085963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.90	chr9	+	1645	10	NNC	ENSMUSG00000032399.9	novel	596	4	NA	NA	206	-150	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6157.49403291892	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64080880	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64081197_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.91	chr9	+	2443	7	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	798	-150	intron_retention	FALSE	canonical	3	17449	junction_3	1267.49627437541	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64081472	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.92	chr9	+	1483	9	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1448	-3	1430	3	3prime_fragment	FALSE	canonical	3	16882	junction_2	1403.52242144541	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCCACATGGTA	NA	False	NA	19	True	AATAAA	-16	NA	64082104	64085951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.93	chr9	+	1026	7	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	-1534	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	7489.42814906452	4060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTTGTGTGACTCTTA	NA	False	NA	35	True	AATAAA	-17	NA	64082882	64085798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64083005_64083373_64083499_64084222_64084346_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ES.35347.95	chr9	+	2421	2	Fusion	ENSMUSG00000119765.1_ENSMUSG00000032399.9	novel	596	4	NA	NA	-616	4	intron_retention	FALSE	canonical	3	19805	junction_1	0	4060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTCCACATGGTAG	NA	False	NA	20	True	AATAAA	-17	NA	64083326	64085952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_64085300_64085504
ES.35347.96	chr9	+	791	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	-9	446	-9	-446	multi-exon	FALSE	canonical	3	413	junction_2	26	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATAAATCAGTTCAAT	1619	False	NA	32	True	AATAAA	-28	NA	64086546	64089968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64086703_64087780_64087871_64089423
ES.35347.97	chr9	+	473	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	33	722	33	-722	multi-exon	FALSE	canonical	3	413	junction_2	26	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTGAGTTTGGAGCCC	1661	False	NA	NA	False	NA	NA	NA	64086588	64089692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64086703_64087780_64087871_64089423
ES.35347.98	chr9	+	202	1	Intergenic	novelGene_28729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTAATTCTAATGCTG	4236	False	NA	NA	False	NA	NA	NA	64089163	64089365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64089200_64089400
ES.35347.99	chr9	+	177	2	Intergenic	novelGene_28730	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAGGAAGGGAGAG	4237	False	NA	NA	False	NA	NA	NA	64089164	64140759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64089310_64140727
ES.35348.1	chr9	-	2571	13	NNC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	-80	50642	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	215.231061239363	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTTATAAGCCCTAC	NA	False	NA	NA	False	NA	NA	NA	64160993	64042409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64042443_64079257_64079293_64093064_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.10	chr9	-	2663	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	392.146263582254	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080188	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.13	chr9	-	3437	17	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-17	-2	intron_retention	FALSE	canonical	3	20	junction_4	408.2337288169	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080212	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.15	chr9	-	2620	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	404.943680137183	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080188	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.16	chr9	-	3384	10	NIC	ENSMUSG00000032400.19	novel	1831	18	NA	NA	-1027	-2	intron_retention	FALSE	canonical	3	116	junction_4	318.543483087135	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64064059	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445
ES.35348.17	chr9	-	2892	19	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	19	junction_5	394.504115204874	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080190	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056547_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.18	chr9	-	3583	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-26	-2	intron_retention	FALSE	canonical	3	273	junction_15	367.010696316977	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080221	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.19	chr9	-	2604	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	397.437800863928	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080188	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054148_64054649_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.2	chr9	-	132	1	Intergenic	novelGene_28724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64042574	64042442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64042400_64042600
ES.35348.22	chr9	-	2667	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_4	394.920702307579	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080196	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054649_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.23	chr9	-	4928	15	NNC	ENSMUSG00000032400.19	novel	1831	18	NA	NA	7452	-2	intron_retention	FALSE	canonical	1	1	junction_8	419.513274825842	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64072709	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063292_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644
ES.35348.24	chr9	-	2683	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	447.173278895357	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080188	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054649_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
ES.35348.25	chr9	-	2784	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	390.42267772755	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTGCCTGGTTTAATC	NA	False	NA	-2	True	ACTAAA	-18	NA	64080185	64044427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64054551_64054689_64056680_64056710_64057437_64057595_64060154_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.26	chr9	-	4936	18	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_9	420.226442499492	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080210	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64056710_64057437_64057595_64060166_64060247_64060832_64060949_64062445_64062652_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.27	chr9	-	2075	11	NNC	ENSMUSG00000032400.19	novel	1831	18	NA	NA	70	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	474.815164037544	418	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64062714	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047297_64051361_64051475_64054106_64054203_64054551_64054689_64056547_64056605_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445
ES.35348.28	chr9	-	3105	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3	intron_retention	FALSE	canonical	3	273	junction_15	379.318137102549	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080188	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.29	chr9	-	2881	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	407.171229303225	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080198	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64078694_64078810_64080099
ES.35348.3	chr9	-	3829	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-2	1127	intron_retention	FALSE	canonical	0	0	junction_1	398.473371478921	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTATTTATTGAAGATC	NA	False	NA	NA	False	NA	NA	NA	64080190	64043298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64043666_64044073_64045342_64047172_64047299_64051361_64051475_64054106_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.30	chr9	-	2822	20	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	407.171229303225	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080195	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64078750_64078810_64080099
ES.35348.31	chr9	-	2771	19	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	116	junction_4	389.161321241741	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080185	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.32	chr9	-	2873	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	425.856198011772	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080193	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068252_64068648_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64078694_64078810_64080099
ES.35348.33	chr9	-	3898	17	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3	intron_retention	FALSE	canonical	3	273	junction_14	378.159667832253	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080188	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.34	chr9	-	4753	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	1	-3	intron_retention	FALSE	canonical	3	116	junction_4	397.23484551503	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCCTGGTTTAAT	NA	False	NA	-3	True	ACTAAA	-17	NA	64080175	64044428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64054551_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.36	chr9	-	3543	17	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_5	400.366687394194	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTGCCTGGTTTAA	NA	False	NA	-4	True	ACTAAA	-16	NA	64080191	64044429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64057416_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.37	chr9	-	4381	12	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-4	-4	intron_retention	TRUE	non_canonical	0	0	junction_4	391.968754025409	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTGCCTGGTTTAA	NA	False	NA	-4	True	ACTAAA	-16	NA	64080199	64044429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64056254_64065759_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.38	chr9	-	2429	16	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	399.890129354996	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTGCCTGGTTTAA	NA	False	NA	-4	True	ACTAAA	-16	NA	64080185	64044429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063361_64069841_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.39	chr9	-	5538	9	NIC	ENSMUSG00000032400.19	novel	1831	18	NA	NA	-1211	-6	intron_retention	FALSE	canonical	3	728	junction_4	154.671425932523	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAATTGTTGCCTGGTTT	NA	False	NA	-6	True	ACTAAA	-14	NA	64064243	64044431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445
ES.35348.4	chr9	-	2841	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-3	179	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	385.314530218148	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGGTGAGTTATGGTT	NA	False	NA	NA	False	NA	NA	NA	64080191	64044246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.40	chr9	-	2665	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.424518140287	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAATTGTTGCCTGGTTT	NA	False	NA	-6	True	ACTAAA	-14	NA	64080175	64044431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045267_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.42	chr9	-	2453	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	198	306	0	262	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTCTCGGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	64080188	64044731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.43	chr9	-	4106	10	ISM	ENSMUSG00000032400.19	ENSMUST00000176299.8	1831	18	14849	-334	-2280	53	intron_retention	FALSE	canonical	3	728	junction_4	159.423111232537	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGACAAAGGCATCATG	NA	False	NA	-6	True	AGTAAA	-33	NA	64065312	64044940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445
ES.35348.44	chr9	-	2080	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	42	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_4	397.437800863928	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGGAGCCATGGGACA	NA	False	NA	-17	True	AGTAAA	-22	NA	64080188	64044951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054148_64054649_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.45	chr9	-	3049	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	2	42	intron_retention	FALSE	canonical	3	116	junction_4	390.504234411646	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGGAGCCATGGGACA	NA	False	NA	-17	True	AGTAAA	-22	NA	64080193	64044951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.46	chr9	-	2240	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	191	526	0	42	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGGAGCCATGGGACA	NA	False	NA	-17	True	AGTAAA	-22	NA	64080195	64044951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.47	chr9	-	6093	15	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-1	39	intron_retention	FALSE	canonical	3	273	junction_12	392.309618458041	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTGGAGCCATGGG	NA	False	NA	-20	True	AGTAAA	-19	NA	64080189	64044954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.48	chr9	-	3140	19	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	2	36	intron_retention	FALSE	canonical	0	0	junction_17	410.237991751792	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64080193	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64078694_64078810_64080099
ES.35348.49	chr9	-	4206	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	1	36	intron_retention	FALSE	canonical	3	273	junction_15	377.309038755559	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64080175	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.5	chr9	-	2937	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	198	-178	0	178	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTGGTGAGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	64080188	64044247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.50	chr9	-	2464	21	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	434.337987631752	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64080185	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64068839_64068965_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64078694_64078810_64080099
ES.35348.51	chr9	-	2332	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	1	36	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	406.540652258859	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64080175	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
ES.35348.53	chr9	-	6488	7	NIC	ENSMUSG00000032400.19	novel	1831	18	NA	NA	-1610	36	intron_retention	FALSE	canonical	3	876	junction_6	110.052134110258	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64064642	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64057595_64060166_64060247_64060832_64060933_64062445
ES.35348.54	chr9	-	2117	18	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	36	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	424.48918212829	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTTTTGGAGCCAT	NA	False	NA	-23	True	AGTAAA	-16	NA	64080195	64044957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054221_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063292_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.55	chr9	-	3616	17	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-2	-920	intron_retention	FALSE	canonical	3	273	junction_14	363.932149411123	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAGAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	64080190	64046194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.56	chr9	-	2843	18	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	176	1769	-15	-920	5prime_fragment	FALSE	canonical	3	273	junction_15	364.626794081205	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAGAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	64080210	64046194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.57	chr9	-	3992	1	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	433	1549	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATATGACCTGAGTTCAA	NA	False	NA	NA	False	NA	NA	NA	64057117	64053125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64053100_64057100
ES.35348.58	chr9	-	2261	9	NIC	ENSMUSG00000032400.19	novel	1047	11	NA	NA	-3	484	intron_retention	FALSE	canonical	3	273	junction_6	19.3225095419824	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGAGAGCTTTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	64080191	64061985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.59	chr9	-	990	9	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	198	18828	0	-784	5prime_fragment	FALSE	canonical	3	273	junction_6	19.3225095419824	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGAGTGCATATGCTTG	NA	False	NA	NA	False	NA	NA	NA	64080188	64063253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.6	chr9	-	3000	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	11	-54	11	54	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTTCATGGGACTGAT	NA	False	NA	54	True	NA	NA	NA	64080375	64044371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.60	chr9	-	3009	8	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	223	19372	-2	-1328	5prime_fragment	FALSE	canonical	3	273	junction_5	20.507838222773	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCTGTCTCAGAGAGTT	NA	False	NA	NA	False	NA	NA	NA	64080163	64063797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.61	chr9	-	1761	1	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-6216	1165	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATTGCTAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	64069248	64067487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64067500_64069200
ES.35348.62	chr9	-	4907	7	NNC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	34	20723	intron_retention	TRUE	non_canonical	0	0	junction_1	215.843822138961	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACGAATGAATGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	64160879	64072328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64072387_64097132_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.63	chr9	-	896	1	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	-3898	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64080188	64079292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64079300_64080200
ES.35348.64	chr9	-	2527	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	-78	-13	-78	13	multi-exon	FALSE	canonical	3	469	junction_6	51.6454257412987	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCAATTTCTCTAG	NA	False	NA	0	True	AATAAA	-29	NA	64160991	64093038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.65	chr9	-	2514	12	NNC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	222.868267061082	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTGGCACACCTTT	NA	False	NA	-12	True	AATAAA	-39	NA	64160903	64093050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64094081_64094572_64094619_64094958_64095021_64097346_64097434_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.66	chr9	-	4074	10	NIC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	30	0	intron_retention	FALSE	canonical	3	469	junction_6	54.4251666550696	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTGGCACACCTT	NA	False	NA	-13	True	AATAAA	-38	NA	64160883	64093051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64121892_64160494
ES.35348.67	chr9	-	5923	10	NIC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	28	-13	intron_retention	FALSE	canonical	3	469	junction_5	54.4387752150393	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGAGATTTCTGCTTT	NA	False	NA	-26	True	AATAAA	-25	NA	64160885	64093064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64094081_64094572_64094619_64094958_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.68	chr9	-	1562	7	NNC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	-4381	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.371497379873	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGGGACAAGAGATTT	NA	False	NA	-33	True	AATAAA	-18	NA	64107341	64093071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64107288
ES.35348.7	chr9	-	2926	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	49	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	406.540652258859	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAGACCTTCATGGGA	NA	False	NA	49	True	NA	NA	NA	64080188	64044376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
ES.35348.72	chr9	-	1869	7	NIC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	54	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	214.371497379873	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATAAAAGGGACAAGA	NA	False	NA	-38	True	AATAAA	-13	NA	64160859	64093076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64160494
ES.35348.73	chr9	-	2355	11	NNC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	34	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	177.46255943156	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATAAAAGGGACAAGA	NA	False	NA	-38	True	AATAAA	-13	NA	64160879	64093076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121870_64160494
ES.35348.76	chr9	-	2269	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	-6	173	-6	-173	multi-exon	FALSE	canonical	3	469	junction_6	51.6454257412987	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCTATCTTTCTTCC	NA	False	NA	-9	True	ATTAAA	-14	NA	64160919	64093224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.77	chr9	-	2800	8	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	22	3974	22	-2455	5prime_fragment	FALSE	canonical	3	469	junction_3	58.2524414833877	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGAGGAATATCCATGA	NA	False	NA	NA	False	AAGAAA	-1	NA	64160891	64097025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.78	chr9	-	4817	7	NIC	ENSMUSG00000004936.9	novel	2436	11	NA	NA	28	-2479	intron_retention	FALSE	canonical	3	469	junction_2	62.8377540443111	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGGGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64160885	64097049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64098614_64098734_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ES.35348.79	chr9	-	4612	2	ISM	ENSMUSG00000004936.9	ENSMUST00000152535.2	597	6	303	3354	303	-3354	intron_retention	FALSE	canonical	3	583	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAGTAAGTAGTTATG	NA	False	NA	NA	False	NA	NA	NA	64102657	64097924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64098614_64098734
ES.35348.8	chr9	-	2887	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	408.098136044088	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080191	64044425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64068839_64068965_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35348.80	chr9	-	177	1	Intergenic	novelGene_28732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTTAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	64098339	64098162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64098200_64098300
ES.35348.81	chr9	-	173	1	Intergenic	novelGene_28733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATAATAAAATGT	NA	False	NA	NA	False	NA	NA	NA	64111631	64111458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64111500_64111600
ES.35348.82	chr9	-	3146	1	Intergenic	novelGene_28734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAAGGTTTCCACTGC	NA	False	NA	NA	False	NA	NA	NA	64125760	64122614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64122600_64125800
ES.35348.9	chr9	-	6140	17	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_14	365.743399632857	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080188	64044425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ES.35349.1	chr9	-	177	1	Intergenic	novelGene_28743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAATAAGAATAAAAA	9804	False	NA	NA	False	NA	NA	NA	64174487	64174310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64174300_64174500
ES.3535.1	chr10	+	85	1	Intergenic	novelGene_2706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	88522071	88522156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_88522100_88522200
ES.35350.1	chr9	-	191	1	Intergenic	novelGene_28748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTGCCGGGCGTGGTG	259	False	NA	NA	False	NA	NA	NA	64185851	64185660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64185700_64185900
ES.35351.1	chr9	-	336	1	Intergenic	novelGene_28752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAATAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	64194052	64193716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64193700_64194100
ES.35352.1	chr9	-	221	1	Intergenic	novelGene_28753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTTGTGTACATGGGT	NA	False	NA	NA	False	ACTAAA	-16	NA	64195065	64194844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64194800_64195100
ES.35353.1	chr9	-	188	1	Intergenic	novelGene_28754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAAACAG	NA	False	NA	NA	False	NA	NA	NA	64196117	64195929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64195900_64196100
ES.35354.1	chr9	-	180	1	Intergenic	novelGene_28755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	64202321	64202141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64202100_64202300
ES.35355.1	chr9	-	3858	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	-252	-1	-252	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTCAAATTGATTCT	4804	False	NA	NA	False	NA	NA	NA	64248822	64214037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ES.35355.2	chr9	-	3509	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	-156	252	-156	2	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTACTTTTTTTTCTT	4900	False	NA	-1	True	ATTAAA	-15	NA	64248726	64214290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ES.35355.4	chr9	-	3415	9	ISM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	92	8877	-9	8253	5prime_fragment	FALSE	canonical	3	33	junction_8	7.33143914930759	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGGACTCCGTTTCT	5179	False	NA	NA	False	AATAAA	-13	NA	64248447	64222914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ES.35356.1	chr9	+	4795	1	Genic_Genomic	ENSMUSG00000036466.18	novel	NA	NA	NA	NA	-4	-118656	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64292903	64297698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64292900_64297700
ES.35356.10	chr9	+	3541	22	NIC	ENSMUSG00000036466.18	novel	3944	23	NA	NA	-27	-15	combination_of_known_junctions	FALSE	canonical	2	2	junction_20	7.74977141057075	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATCAATGTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	64292937	64608242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64607644
ES.35356.12	chr9	+	3273	24	ISM	ENSMUSG00000036466.18	ENSMUST00000164113.8	6018	25	60	3278	0	-6	5prime_fragment	FALSE	canonical	1	2	junction_16	7.77325160107958	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTAGGTGTCTCACA	NA	False	NA	NA	False	AATAAA	-11	NA	64292967	64613209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
ES.35356.13	chr9	+	2499	15	ISM	ENSMUSG00000036466.18	ENSMUST00000118485.8	3944	23	67	20390	7	-853	5prime_fragment	FALSE	canonical	2	11	junction_5	5.67845911838623	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAGGGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	64292974	64594182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644
ES.35356.14	chr9	+	3813	22	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	9	-32	intron_retention	FALSE	canonical	1	1	junction_21	7.47452210683891	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTATATTATAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	64292976	64608225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64607378
ES.35356.15	chr9	+	8424	24	NIC	ENSMUSG00000036466.18	novel	6018	25	NA	NA	17	-13	intron_retention	FALSE	canonical	0	0	junction_23	7.93165513112444	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAACATTACAAGAATG	NA	False	NA	NA	False	AATAAA	-11	NA	64292984	64616474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64598632_64599076_64599206_64599636_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008_64613216_64613808
ES.35356.16	chr9	+	2791	9	NNC	ENSMUSG00000036466.18	novel	3944	23	NA	NA	34	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	8.94427190999916	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAAAAAGGTAAAAAGA	NA	False	NA	NA	False	AATAAA	-21	NA	64293001	64557115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64555335
ES.35356.17	chr9	+	175	1	Intergenic	novelGene_28760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGACCCAGGTTT	4969	False	NA	NA	False	NA	NA	NA	64298981	64299156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64299000_64299200
ES.35356.18	chr9	+	4108	4	NNC	ENSMUSG00000036466.18	novel	3474	13	NA	NA	-22224	1811	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.55777733351102	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTCTGAATCATAATA	588	False	NA	NA	False	AATAAA	-16	NA	64545516	64558938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64545764_64547295_64547417_64555096_64555234_64555335
ES.35356.19	chr9	+	2603	12	ISM	ENSMUSG00000036466.18	ENSMUST00000118485.8	3944	23	293650	344	-14505	-344	intron_retention	FALSE	canonical	2	2	junction_10	8.0822220985065	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCAGCTAAAAGCTATG	NA	False	NA	NA	False	ATTAAA	-17	NA	64586557	64614228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008
ES.35356.2	chr9	+	3469	25	FSM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-60	3271	0	1	multi-exon	FALSE	canonical	2	5	junction_22	6.84348838921594	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTCTCACATAACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	64292907	64613216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
ES.35356.20	chr9	+	3093	7	NIC	ENSMUSG00000036466.18	novel	3652	23	NA	NA	-2370	-21	intron_retention	FALSE	canonical	2	5	junction_4	9.03696114115064	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGTGGTATCAATGTG	NA	False	NA	NA	False	NA	NA	NA	64598692	64608236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64599206_64599636_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
ES.35356.3	chr9	+	6734	25	FSM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-58	4	2	-4	multi-exon	FALSE	canonical	2	5	junction_22	6.84348838921594	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAGAATGCCTACTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	64292909	64616483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
ES.35356.4	chr9	+	3937	26	NNC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	2	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.64814430961926	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGTATCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	64292909	64608238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64293111_64304796_64304881_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
ES.35356.5	chr9	+	6441	22	ISM	ENSMUSG00000036466.18	ENSMUST00000118485.8	3944	23	2	-1906	2	-9	intron_retention	FALSE	canonical	2	2	junction_20	7.4422950157892	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATTACAAGAATGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	64292909	64616478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008
ES.35356.6	chr9	+	3380	11	NNC	ENSMUSG00000036466.18	novel	3944	23	NA	NA	2	14227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	8.70402205879558	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTCATCGTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	64292909	64571354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64569465
ES.35356.7	chr9	+	3831	25	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	28	-15	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	7.12378157223317	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATCAATGTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	64292935	64608242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
ES.35356.8	chr9	+	3307	24	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	28	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	7.52060810797901	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTAGGTGTCTCACATA	NA	False	NA	NA	False	AATAAA	-13	NA	64292935	64613211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
ES.35356.9	chr9	+	4040	24	ISM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-32	8245	28	-15	5prime_fragment	FALSE	canonical	2	5	junction_22	6.82982450986398	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATCAATGTGATGTCT	NA	False	NA	NA	False	NA	NA	NA	64292935	64608242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378
ES.35357.1	chr9	+	195	1	Intergenic	novelGene_28761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	64617795	64617990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64617800_64618000
ES.35358.1	chr9	+	176	1	Intergenic	novelGene_28762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTTGCAACTTA	NA	False	NA	NA	False	NA	NA	NA	64620272	64620448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64620300_64620400
ES.35359.1	chr9	-	2065	5	NNC	ENSMUSG00000004771.13	novel	695	3	NA	NA	9	21738	intron_retention	TRUE	canonical	0	0	junction_1	403.175210051412	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCACAGAGTTGAAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	64645003	64600842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64602299_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ES.35359.10	chr9	-	1381	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	27	928	-1	276	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATAGGGTGTGGTTATGT	NA	False	NA	NA	False	AATAAA	-21	NA	64645013	64623508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ES.35359.11	chr9	-	2444	4	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	939	junction_2	29.9369708257569	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645038	64623886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64632865_64633905_64635712_64644865
ES.35359.12	chr9	-	1045	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	-15	1306	-15	0	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645055	64623886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ES.35359.14	chr9	-	637	3	FSM	ENSMUSG00000004771.13	ENSMUST00000167569.8	726	3	-13	102	-3	0	multi-exon	FALSE	canonical	3	23	junction_2	492.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645037	64623886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64644865
ES.35359.15	chr9	-	3487	3	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	952	junction_2	28	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTATTGTTTACTCTTC	NA	False	NA	-6	True	AATAAA	-18	NA	64645042	64623888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64635712_64644865
ES.35359.16	chr9	-	3429	4	NNC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	462.541769885584	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTCAGTTATTGTTTA	NA	False	NA	-12	True	AATAAA	-12	NA	64645038	64623894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64624271_64632783_64635712_64644865_64644930_64644977
ES.35359.18	chr9	-	863	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	2	1471	2	0	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTGTTTTATTACT	NA	False	NA	-4	True	AATATA	-19	NA	64645038	64624051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ES.35359.19	chr9	-	3320	3	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	952	junction_2	28	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTGTTTTATTACT	NA	False	NA	-4	True	AATATA	-19	NA	64645038	64624051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64635712_64644865
ES.35359.2	chr9	-	2329	2	Antisense	novelGene_ENSMUSG00000036466.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGTCCACAGAGTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	64613979	64600846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_64602299_64613102
ES.35359.20	chr9	-	396	3	FSM	ENSMUSG00000004771.13	ENSMUST00000167569.8	726	3	63	267	51	0	multi-exon	FALSE	canonical	3	23	junction_2	492.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTGTTTTATTACT	NA	False	NA	-4	True	AATATA	-19	NA	64644961	64624051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64644865
ES.35359.22	chr9	-	1031	1	NIC	ENSMUSG00000004771.13	novel	500	3	NA	NA	238	2239	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTCTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	64632764	64631733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64631700_64632800
ES.35359.3	chr9	-	2967	1	Antisense	novelGene_ENSMUSG00000036466.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTGGTGCCAACTTCT	NA	False	NA	NA	False	AATAAA	-28	NA	64618918	64615951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_64616000_64618900
ES.35359.4	chr9	-	2344	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	-2	-6	-2	6	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTACATTCTTCTTCT	NA	False	NA	4	True	AATAAA	-27	NA	64645042	64622574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ES.35359.5	chr9	-	3743	4	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	-1	intron_retention	FALSE	canonical	3	939	junction_2	29.9369708257569	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGTGAGATTACATTC	NA	False	NA	-3	True	AATAAA	-20	NA	64645032	64622581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64632865_64633905_64635712_64644865
ES.35359.7	chr9	-	4786	3	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	2	-5	intron_retention	FALSE	canonical	3	952	junction_2	28	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGTGGTGAGATTAC	NA	False	NA	-7	True	AATAAA	-16	NA	64645038	64622585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64635712_64644865
ES.35359.8	chr9	-	2132	4	FSM	ENSMUSG00000004771.13	ENSMUST00000171100.2	508	4	-27	-1597	1	-7	multi-exon	FALSE	canonical	3	7	junction_3	456.48244459368	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTGTGGTGAGATT	NA	False	NA	-9	True	AATAAA	-14	NA	64645039	64622587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64644865
ES.35359.9	chr9	-	3368	4	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	0	-9	intron_retention	FALSE	canonical	3	899	junction_2	44.5046814016983	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCAGTGTGGTGAGA	NA	False	NA	-11	True	AATAAA	-12	NA	64645040	64622589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64624271_64632783_64634100_64635515_64635712_64644865
ES.3536.1	chr10	+	2197	3	NNC	ENSMUSG00000111919.2	novel	326	2	NA	NA	-171	3359	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACACAGTTGTTAGTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	88540285	88544296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88540492_88542264_88544098_88544138
ES.3536.2	chr10	+	3223	4	NNC	ENSMUSG00000111919.2	novel	326	2	NA	NA	-29	5589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.35702260395516	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTATTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	88540427	88546526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88540492_88542264_88544098_88544138_88545295_88546356
ES.35360.1	chr9	-	180	1	Intergenic	novelGene_28763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACAATAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	64649070	64648890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64648900_64649100
ES.35361.1	chr9	+	218	1	Intergenic	novelGene_28764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTGTAGGTGCT	NA	False	NA	NA	False	NA	NA	NA	64672701	64672919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64672700_64672900
ES.35362.1	chr9	-	164	1	Intergenic	novelGene_28765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAATAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64707536	64707372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64707400_64707500
ES.35363.1	chr9	+	6590	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-21	2076	-21	-1517	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAAGTGTTTATTTTC	NA	False	NA	NA	False	AATATA	-27	NA	64718600	64824873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.10	chr9	+	2064	8	ISM	ENSMUSG00000053641.10	ENSMUST00000215025.2	2204	10	-101	6815	-9	-6815	5prime_fragment	FALSE	canonical	3	15	junction_2	4.88228785446716	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTTTATAGCTGCTAA	NA	False	NA	NA	False	AATAAA	-15	NA	64718612	64760488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697
ES.35363.11	chr9	+	8653	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-8	0	-8	0	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGATAATTATTATTTAT	NA	False	NA	3	True	AATAAA	-18	NA	64718613	64826949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.12	chr9	+	5922	32	ISM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	78	7022	-14	534	5prime_fragment	FALSE	canonical	3	9	junction_22	5.05577630928131	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTCTCCATGTCTTT	NA	False	NA	NA	False	CATAAA	-36	NA	64718699	64819927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635
ES.35363.13	chr9	+	6472	34	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	1	-1520	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	6.0349456774407	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACAAGTGTTTATT	NA	False	NA	NA	False	AATATA	-24	NA	64718714	64824870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794267_64795762_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.14	chr9	+	6329	33	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	9	-1528	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.19444055181741	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAACTTATGAAACAAG	NA	False	NA	NA	False	AATATA	-16	NA	64718722	64824862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64718869_64742567_64742635_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.15	chr9	+	5996	32	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-7	-1517	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.54687730887013	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAAGTGTTTATTTTC	NA	False	NA	NA	False	AATATA	-27	NA	64718734	64824873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64718869_64742567_64742635_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.16	chr9	+	8487	33	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	33	-3	intron_retention	FALSE	non_canonical	0	0	junction_30	6.48435617467147	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCTGATAATTATTATT	NA	False	NA	0	True	AATAAA	-15	NA	64718774	64826946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819069_64819614_64819799_64819957_64820023_64824240
ES.35363.18	chr9	+	4790	11	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	8251	-2	intron_retention	FALSE	canonical	3	12	junction_3	5.67538544946509	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCTGATAATTATTATTT	778	False	NA	1	True	AATAAA	-16	NA	64804492	64826947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819799_64819957_64820023_64824240
ES.35363.19	chr9	+	1405	1	Genic_Genomic	ENSMUSG00000053641.10	novel	NA	NA	NA	NA	-7618	8	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAAAGTCATAGGA	648	False	NA	NA	False	NA	NA	NA	64806860	64808265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64806900_64808300
ES.35363.2	chr9	+	8259	33	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-20	-15	intron_retention	FALSE	canonical	2	3	junction_2	6.19444055181741	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTAAGACTCTTACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	64718601	64826671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64718869_64742567_64742635_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.20	chr9	+	3289	9	ISM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	95496	560	-361	-1	3prime_fragment	FALSE	canonical	3	16	junction_1	5.17052946998661	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCCCAGGAAATATCAT	1352	False	NA	NA	False	AATAAA	-20	NA	64814117	64826389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.3	chr9	+	8435	35	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-18	-15	intron_retention	FALSE	non_canonical	0	0	junction_3	7.05661730228195	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTAAGACTCTTACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	64718603	64826671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64742567_64742635_64743235_64743364_64743846_64743897_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.4	chr9	+	8542	33	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-12	9	intron_retention	FALSE	canonical	0	0	junction_9	6.99937218166744	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATTTATTGGTGCAAC	NA	False	NA	12	True	AATAAA	-27	NA	64718609	64826958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64742567_64742635_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766644_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.5	chr9	+	6890	32	NIC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-11	-1519	intron_retention	FALSE	canonical	2	3	junction_2	6.28361925706371	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAACAAGTGTTTATTT	NA	False	NA	NA	False	AATATA	-25	NA	64718610	64824871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64718869_64742567_64742635_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819799_64819957_64820023_64824240
ES.35363.6	chr9	+	8380	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-11	276	-11	-13	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGACTCTTACTAGGT	NA	False	NA	NA	False	AATAAA	-20	NA	64718610	64826673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.7	chr9	+	8101	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	-9	553	-9	6	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAATATCATTGTATGA	NA	False	NA	NA	False	AATAAA	-27	NA	64718612	64826396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35363.8	chr9	+	6270	35	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	6.31552160544075	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCCAGGAAATATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	64718612	64826390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240_64824381_64826205
ES.35363.9	chr9	+	8909	37	NNC	ENSMUSG00000053641.10	novel	8645	34	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_2	8.51410412996003	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCTGATAATTATTATT	NA	False	NA	0	True	AATAAA	-15	NA	64718612	64826946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64718869_64734804_64734917_64742567_64742635_64742789_64742869_64743235_64743364_64746094_64746427_64749721_64749972_64756171_64756239_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ES.35364.1	chr9	-	1923	1	Intergenic	novelGene_28766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCTATGAAATTAGAAA	6478	False	NA	NA	False	NA	NA	NA	64731245	64729322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64729300_64731200
ES.35365.1	chr9	-	3771	1	Antisense	novelGene_ENSMUSG00000053641.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCAGTTCGGTAGCGTT	9465	False	NA	NA	False	NA	NA	NA	64801633	64797862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_64797900_64801600
ES.35366.1	chr9	-	4313	1	Antisense	novelGene_ENSMUSG00000053641.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATATTCACAGCATTCT	4161	False	NA	NA	False	NA	NA	NA	64825964	64821651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_64821700_64826000
ES.35367.1	chr9	-	180	1	Intergenic	novelGene_28767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAGAAAAGCTG	883	False	NA	NA	False	NA	NA	NA	64829242	64829062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64829100_64829200
ES.35368.2	chr9	-	2967	6	NNC	ENSMUSG00000034452.8	novel	5213	10	NA	NA	14926	-9	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	2.78567765543682	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCCACTGGCATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64843963	64830151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64843196_64843306_64843919
ES.35368.3	chr9	-	3143	8	NNC	ENSMUSG00000034452.8	novel	5213	10	NA	NA	14926	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.39045721866879	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGTCCACTGGCATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	64843963	64830151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64831953_64833450_64833618_64834444_64834535_64835239_64835996_64838461_64838554_64839448_64839533_64843196_64843306_64843919
ES.35369.1	chr9	+	225	1	Intergenic	novelGene_28768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	64865707	64865932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64865700_64865900
ES.3537.1	chr10	+	168	1	Intergenic	novelGene_2708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	88563479	88563647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_88563500_88563600
ES.35370.1	chr9	+	2648	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-89	261	-89	9	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGCAATGTCTCTCGG	NA	False	NA	NA	False	AATATA	-27	NA	64868097	64893999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.10	chr9	+	1970	13	NNC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	5	16493	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_12	64.809764353495	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATTTTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	64868191	64910753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64910478
ES.35370.12	chr9	+	2161	12	ISM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	10	2464	10	-2194	5prime_fragment	FALSE	canonical	3	115	junction_1	32.9116021141331	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAAAGGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	64868196	64891796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259
ES.35370.14	chr9	+	3265	12	NNC	ENSMUSG00000034263.14	novel	2837	13	NA	NA	-6	-70	intron_retention	FALSE	canonical	1	3	junction_1	65.9496426972946	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGCACTTAGAAACAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	64868212	64893920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868540_64869046_64869281_64871607_64871886_64873971_64874080_64879254_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.15	chr9	+	2842	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	-5	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACTCCTAAGAAGCAAT	NA	False	NA	NA	False	AATATA	-18	NA	64868213	64893990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.16	chr9	+	2702	13	NNC	ENSMUSG00000034263.14	novel	2837	13	NA	NA	-5	-69	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	63.1477544247528	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGCACTTAGAAACAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	64868213	64893921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868540_64869046_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.17	chr9	+	3113	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	-4	-272	-4	2	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGATTTTGACTGTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	64868214	64894262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.18	chr9	+	4958	12	NNC	ENSMUSG00000034263.14	novel	2837	13	NA	NA	-4	-68	intron_retention	FALSE	canonical	1	3	junction_1	65.3276547821736	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCACTTAGAAACAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	64868214	64893922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868540_64869046_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.19	chr9	+	5036	12	NIC	ENSMUSG00000034263.14	novel	2837	13	NA	NA	0	-57	intron_retention	FALSE	canonical	3	19	junction_1	60.8485452130571	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64868218	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.2	chr9	+	2489	13	NNC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	-67	-57	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	63.1477544247528	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64868119	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868221_64869046_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.20	chr9	+	2460	12	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	756	57	4	-57	3prime_fragment	FALSE	canonical	3	207	junction_5	14.7036848139314	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64868974	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.21	chr9	+	2785	12	ISM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	788	2	4	-2	3prime_fragment	FALSE	canonical	3	207	junction_5	14.7036848139314	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTAGGATTTTGACT	NA	False	NA	NA	False	ATTAAA	-15	NA	64868974	64894258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.22	chr9	+	2614	12	NNC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	4	-61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.4694051288397	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAACAAATGGTGTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	64868974	64893929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64869281_64871607_64871886_64873813_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.23	chr9	+	4705	11	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	4	-68	intron_retention	FALSE	canonical	3	207	junction_5	15.0402792527267	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCACTTAGAAACAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	64868974	64893922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.24	chr9	+	4955	9	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	4	-2196	intron_retention	FALSE	canonical	3	207	junction_4	11.3571288184999	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAGGAAAAGGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	64868974	64891794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64880093_64880499_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259
ES.35370.25	chr9	+	5693	9	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	4	-50	intron_retention	FALSE	canonical	3	208	junction_4	14.148763196831	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTGATCTATCTTA	NA	False	NA	NA	False	ATTAAA	-38	NA	64868974	64893940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.26	chr9	+	6783	10	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	5	-69	intron_retention	FALSE	canonical	3	207	junction_5	15.4352490611667	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGCACTTAGAAACAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	64868975	64893921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64882992_64885418_64885564_64887056_64889390_64891259_64891326_64893140
ES.35370.27	chr9	+	3102	5	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	15355	57	14603	-57	3prime_fragment	FALSE	canonical	3	229	junction_3	10.0623058987491	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64883573	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.28	chr9	+	3740	4	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	16521	68	15769	-68	intron_retention	FALSE	canonical	3	229	junction_3	3.74165738677394	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCACTTAGAAACAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	64884739	64893922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64885564_64887056_64887191_64889270_64889390_64891259
ES.35370.29	chr9	+	218	1	Intergenic	novelGene_28770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGACATCCTCATATTT	NA	False	NA	NA	False	NA	NA	NA	64902056	64902274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64902100_64902300
ES.35370.3	chr9	+	2443	12	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	-43	-57	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	70.171808047307	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64868143	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.30	chr9	+	173	2	Antisense	novelGene_ENSMUSG00000033629.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAACCCTGCCATCTGC	NA	False	NA	NA	False	NA	NA	NA	64902057	64917689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_64902216_64917674
ES.35370.4	chr9	+	3097	12	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	-41	-57	intron_retention	FALSE	canonical	3	115	junction_1	35.1243364103076	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGGTGTTTTGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	64868145	64893933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.5	chr9	+	2859	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-39	0	-39	0	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTAGGATTTTGACTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	64868147	64894260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.6	chr9	+	2782	13	NNC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	63.1477544247528	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTATTAGGATTTTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	64868149	64894256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64868221_64869046_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.7	chr9	+	6569	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-19	-3730	-19	3730	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAGATCTCTCTTTGGA	NA	False	NA	NA	False	NA	NA	NA	64868167	64897990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.8	chr9	+	3544	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	-11	-713	-11	713	multi-exon	FALSE	canonical	3	115	junction_1	33.6860505254029	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGAAATACACAAGTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	64868175	64894973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35370.9	chr9	+	5301	11	NIC	ENSMUSG00000034263.14	novel	2820	13	NA	NA	0	-68	intron_retention	FALSE	canonical	3	115	junction_1	36.300964174523	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCACTTAGAAACAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	64868186	64893922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64880093_64880499_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ES.35371.1	chr9	-	170	1	Intergenic	novelGene_28769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGTGCATCTGGT	NA	False	NA	NA	False	NA	NA	NA	64877605	64877435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64877400_64877600
ES.35372.1	chr9	-	4133	6	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	21038	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.49817776302	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATTTAATCTCATGAGT	NA	False	NA	14	True	ATTAAA	-38	NA	64907937	64894249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895482_64895723_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476
ES.35372.10	chr9	-	2434	11	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	219	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	89.7445820091664	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTGTGCTTAAACA	NA	False	NA	-4	True	ATTAAA	-20	NA	64928756	64894267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905552_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.11	chr9	-	2774	11	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.3217028183149	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTGTGCTTAAACA	NA	False	NA	-4	True	ATTAAA	-20	NA	64928966	64894267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905682_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.12	chr9	-	1810	5	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	29362	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.580585738525	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTGTGCTTAAACA	NA	False	NA	-4	True	ATTAAA	-20	NA	64899613	64894267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895508_64895555_64895812_64897598_64897731_64898255_64898363_64899538
ES.35372.13	chr9	-	4873	3	NIC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	22834	-3	intron_retention	FALSE	canonical	3	273	junction_2	6.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACTTGTGCTTAAACA	NA	False	NA	-4	True	ATTAAA	-20	NA	64906141	64894267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64898363_64899538_64899652_64905476
ES.35372.14	chr9	-	5871	9	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	14	-4	intron_retention	FALSE	canonical	0	0	junction_5	99.7694216681644	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTGTGCTTAAAC	NA	False	NA	-5	True	ATTAAA	-19	NA	64928961	64894268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895812_64897598_64898363_64899538_64899652_64905476_64908374_64911538_64911588_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.15	chr9	-	1488	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-17	1238	-17	-1238	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTGCTCCTCCCTACA	NA	False	NA	NA	False	NA	NA	NA	64928992	64895502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.16	chr9	-	4475	6	NIC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	36	-10169	intron_retention	FALSE	canonical	3	263	junction_2	27.5129060624282	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	64928939	64904433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.17	chr9	-	4263	2	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	19765	-10206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	9454	False	NA	NA	False	NA	NA	NA	64909210	64904470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64906351_64906827
ES.35372.18	chr9	-	2373	6	ISM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-17	12324	-17	-12324	5prime_fragment	FALSE	canonical	3	263	junction_2	27.5129060624282	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATATTTCAGAGGACA	NA	False	NA	NA	False	NA	NA	NA	64928992	64906588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.19	chr9	-	1548	7	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	4	-12342	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	113.789889220831	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	64928971	64906606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64907477_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.2	chr9	-	2748	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	-28	-11	-28	11	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACATCATTTAATCTCAT	NA	False	NA	10	True	ATTAAA	-34	NA	64929003	64894253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.3	chr9	-	4484	10	NIC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	263	junction_6	22.6737461711138	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGTGCTTAAACATCA	NA	False	NA	-1	True	ATTAAA	-23	NA	64928963	64894264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.5	chr9	-	2368	12	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.3158719591369	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTTGTGCTTAAACAT	NA	False	NA	-3	True	ATTAAA	-21	NA	64928967	64894266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64894829_64895159_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.7	chr9	-	2487	12	NNC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.3158719591369	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTTGTGCTTAAACAT	NA	False	NA	-3	True	ATTAAA	-21	NA	64928997	64894266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_64895482_64895723_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35372.8	chr9	-	3873	10	NIC	ENSMUSG00000033629.7	novel	2709	11	NA	NA	10	-2	intron_retention	FALSE	canonical	3	252	junction_1	26.0829635519877	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTTGTGCTTAAACAT	NA	False	NA	-3	True	ATTAAA	-21	NA	64928965	64894266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_64895812_64897598_64897731_64898255_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ES.35373.1	chr9	-	163	1	Intergenic	novelGene_28771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAAAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	64935482	64935319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64935300_64935500
ES.35374.1	chr9	-	174	1	Intergenic	novelGene_28772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAAAGAACAGT	NA	False	NA	NA	False	NA	NA	NA	64938129	64937955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_64938000_64938100
ES.35375.1	chr9	+	142	1	Intergenic	novelGene_28773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATTTCTGTATCCAAA	NA	False	NA	NA	False	NA	NA	NA	64939020	64939162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64939000_64939200
ES.35376.10	chr9	+	3355	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	9	1444	9	217	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATAGTAGTGATTGGT	NA	False	NA	NA	False	NA	NA	NA	64939704	64988489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.11	chr9	+	4925	22	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	36.6831131946403	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTTCCCCCATGA	NA	False	NA	30	True	ATTAAA	-27	NA	64939706	64989932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982354_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.12	chr9	+	3259	20	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	11	226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.6170158906753	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATTGGTTTGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	64939706	64988498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944534_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.13	chr9	+	4803	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	11	-6	11	6	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCCATGACTTATGT	NA	False	NA	37	True	ATTAAA	-34	NA	64939706	64989939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.15	chr9	+	7052	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	13	6	intron_retention	FALSE	canonical	3	89	junction_16	12.8524548459766	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCCATGACTTATGT	NA	False	NA	37	True	ATTAAA	-34	NA	64939708	64989939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.16	chr9	+	2588	17	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	13	-6263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	32.2339470705962	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTCTTTTCAAATGT	NA	False	NA	NA	False	TATAAA	-18	NA	64939708	64981881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981612
ES.35376.17	chr9	+	2320	14	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	13	18789	13	-4043	intron_retention	FALSE	canonical	3	108	junction_10	11.4344025698843	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTGTCCCTCTACA	NA	False	NA	NA	False	NA	NA	NA	64939708	64971144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708
ES.35376.18	chr9	+	4493	19	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	30.8740971777833	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTATTTCCCCCATG	NA	False	NA	29	True	ATTAAA	-26	NA	64939708	64989931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64985244_64985388_64985955_64986068_64988012
ES.35376.19	chr9	+	4971	22	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	36.236812442097	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCCCTACAAAGTATTT	NA	False	NA	21	True	ATTAAA	-18	NA	64939708	64989923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982411_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.2	chr9	+	6198	20	NNC	ENSMUSG00000032393.16	novel	3142	21	NA	NA	-7	0	intron_retention	FALSE	canonical	3	13	junction_16	27.100714999103	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTGCAGTTCATGGA	NA	False	NA	7	True	AGTAAA	-14	NA	64939688	64988272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.21	chr9	+	4299	20	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	17	2	intron_retention	FALSE	canonical	0	0	junction_5	38.3384837360589	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAGTTTAATCACAAG	NA	False	NA	NA	False	CATAAA	-16	NA	64939712	64988817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.22	chr9	+	3075	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	18	1715	18	41	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTACCTGCCACATA	NA	False	NA	-47	True	AATAGA	-22	NA	64939713	64988218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.23	chr9	+	5423	15	NIC	ENSMUSG00000032393.16	novel	3142	21	NA	NA	18	-551	intron_retention	FALSE	canonical	3	108	junction_9	10.507528884819	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTTATAATGCCATTC	NA	False	NA	NA	False	AATAAA	-17	NA	64939713	64974636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632
ES.35376.24	chr9	+	4789	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	18	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	30.1669935525567	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCCCCATGACTTATG	NA	False	NA	36	True	ATTAAA	-33	NA	64939713	64989938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981726_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.25	chr9	+	4710	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	29.9514189981042	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTTCCCCCATGA	NA	False	NA	30	True	ATTAAA	-27	NA	64939713	64989932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963152_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.26	chr9	+	4806	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.148963497938	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTTCCCCCATGA	NA	False	NA	30	True	ATTAAA	-27	NA	64939714	64989932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958801_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.28	chr9	+	3721	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	22	165	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	30.0299019953515	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGCCTTTCCTTAAT	NA	False	NA	NA	False	AATATA	-13	NA	64939717	64988980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64988012
ES.35376.29	chr9	+	3850	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	24	934	24	184	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTGTTCCCTAGTTTC	NA	False	NA	NA	False	AATATA	-32	NA	64939719	64988999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.3	chr9	+	3205	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	-7	1610	-7	51	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGACATGTTCCCA	NA	False	NA	58	True	NA	NA	NA	64939688	64988323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.30	chr9	+	4127	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	26	655	26	463	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTAACTTTTTTTTAT	NA	False	NA	NA	False	TTTAAA	-15	NA	64939721	64989278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.31	chr9	+	5083	21	FSM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	-282	-1659	26	-2	multi-exon	FALSE	canonical	1	5	junction_1	28.8333140655042	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTATTTCCCCCATG	NA	False	NA	29	True	ATTAAA	-26	NA	64939721	64989931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64940209_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.32	chr9	+	5580	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	27	6	intron_retention	FALSE	canonical	3	13	junction_17	26.7318162495555	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCCATGACTTATGT	NA	False	NA	37	True	ATTAAA	-34	NA	64939722	64989939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.33	chr9	+	2861	19	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	27	4433	27	-2644	5prime_fragment	FALSE	canonical	3	89	junction_17	13.1182889956289	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTTTTTCTTCCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	64939722	64985500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244
ES.35376.34	chr9	+	4731	21	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	29.6891815313255	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAGTATTTCCCCCATG	NA	False	NA	29	True	ATTAAA	-26	NA	64939722	64989931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970814_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.36	chr9	+	3804	25	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	27	1850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	55.7414044195755	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTCAGTGTTCCTT	NA	False	NA	9	True	AATAAA	-16	NA	64939722	64991783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960328_64960456_64961049_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012_64988127_64989313_64989359_64989656_64989740_64990154_64990382_64991307
ES.35376.38	chr9	+	6468	20	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	27	1852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.1279118255514	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTCAGTGTTCCTTGC	NA	False	NA	11	True	AATAAA	-18	NA	64939722	64991785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961806_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.4	chr9	+	5419	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	-7	14	intron_retention	FALSE	canonical	3	89	junction_16	12.8524548459766	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGATAGTACTCTAATAC	NA	False	NA	21	True	AGTAAA	-28	NA	64939688	64988286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.41	chr9	+	3715	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	35	1058	35	60	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTATTTGAAAGCTTG	NA	False	NA	NA	False	AAAACA	-8	NA	64939730	64988875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.44	chr9	+	2750	18	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	39	6606	39	-4817	5prime_fragment	FALSE	canonical	3	89	junction_17	13.4073780235782	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCCAGCTCTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	64939734	64983327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017
ES.35376.45	chr9	+	4637	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	39	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.2628375269084	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCCCCATGACTTATG	NA	False	NA	36	True	ATTAAA	-33	NA	64939734	64989938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64939906_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.46	chr9	+	2331	16	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	47	16109	47	-1363	5prime_fragment	FALSE	canonical	3	108	junction_10	10.7235980694707	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACATATATTTTTAGGT	NA	False	NA	NA	False	TATAAA	-34	NA	64939742	64973824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632
ES.35376.47	chr9	+	2114	14	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	48	18960	48	-4214	5prime_fragment	FALSE	canonical	3	108	junction_10	11.4344025698843	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATTGTGTTTGCATC	NA	False	NA	NA	False	NA	NA	NA	64939743	64970973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708
ES.35376.48	chr9	+	4634	20	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	48	-14	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	30.0299019953515	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTTCCCCTACAAAGT	NA	False	NA	17	True	ATTAAA	-14	NA	64939743	64989919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64988012
ES.35376.49	chr9	+	7235	20	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	2103	1850	intron_retention	FALSE	canonical	3	13	junction_16	27.100714999103	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTCAGTGTTCCTT	NA	False	NA	9	True	AATAAA	-16	NA	64942162	64991783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.5	chr9	+	3336	22	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	36.236812442097	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCAGTTCATGGATA	NA	False	NA	9	True	AGTAAA	-16	NA	64939694	64988274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982411_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.51	chr9	+	3620	15	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	543	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	42.6624745495837	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTTCCCCCATGACT	215	False	NA	32	True	ATTAAA	-29	NA	64960415	64989934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982312_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.52	chr9	+	5975	11	NNC	ENSMUSG00000032393.16	novel	5515	19	NA	NA	2232	1848	intron_retention	FALSE	canonical	3	13	junction_7	35.7783454061252	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGGCTTCAGTGTTCC	1198	False	NA	7	True	AATAAA	-14	NA	64962104	64991781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.53	chr9	+	1423	10	NNC	ENSMUSG00000032393.16	novel	5515	19	NA	NA	474	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	51.1492611244801	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGGATAGTACTCTA	6624	False	NA	17	True	AGTAAA	-24	NA	64967530	64988282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64982224_64982354_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.54	chr9	+	241	1	Intergenic	novelGene_28774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGACATGATAGACTGTT	7549	False	NA	NA	False	AAAAAG	-45	NA	64968455	64968696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64968500_64968700
ES.35376.55	chr9	+	904	6	NIC	ENSMUSG00000032393.16	novel	3142	21	NA	NA	4125	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	47.0701603991318	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTGCAGTTCATGGA	NA	False	NA	7	True	AGTAAA	-14	NA	64971181	64988272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64988012
ES.35376.56	chr9	+	4357	1	NIC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	-2468	-3971	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAATAAG	NA	False	NA	NA	False	NA	NA	NA	64979816	64984173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_64979800_64984200
ES.35376.57	chr9	+	4423	3	ISM	ENSMUSG00000032393.16	ENSMUST00000214247.2	836	4	2097	-3610	1818	1850	3prime_fragment	FALSE	canonical	3	135	junction_1	0.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTCAGTGTTCCTT	NA	False	NA	9	True	AATAAA	-16	NA	64984847	64991783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64985388_64985955_64986068_64988012
ES.35376.58	chr9	+	4275	2	ISM	ENSMUSG00000032393.16	ENSMUST00000214247.2	836	4	2815	-3612	2536	1852	3prime_fragment	FALSE	canonical	3	136	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTCAGTGTTCCTTGC	NA	False	NA	11	True	AATAAA	-18	NA	64985565	64991785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64986068_64988012
ES.35376.59	chr9	+	5275	1	Genic_Genomic	ENSMUSG00000032393.16	novel	NA	NA	NA	NA	3479	1850	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTCAGTGTTCCTT	NA	False	NA	9	True	AATAAA	-16	NA	64986508	64991783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_64986500_64991800
ES.35376.6	chr9	+	6654	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	6	-1852	6	1852	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTCAGTGTTCCTTGC	NA	False	NA	11	True	AATAAA	-18	NA	64939701	64991785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.7	chr9	+	7703	19	NNC	ENSMUSG00000032393.16	novel	4808	21	NA	NA	9	6	intron_retention	FALSE	canonical	1	1	junction_14	38.9930747254331	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCCATGACTTATGT	NA	False	NA	37	True	ATTAAA	-34	NA	64939704	64989939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64981720_64981868_64982224_64983171_64985244_64985388_64985955_64986068_64988012
ES.35376.8	chr9	+	3925	19	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	9	3387	9	-1598	intron_retention	FALSE	canonical	3	89	junction_17	13.1182889956289	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTTTTAGCCAAGCGGA	NA	False	NA	NA	False	AATAAA	-26	NA	64939704	64986546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244
ES.35376.9	chr9	+	1527	6	ISM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	9	36403	9	-10206	5prime_fragment	FALSE	canonical	3	111	junction_4	10.3846039885977	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTTTTGATT	NA	False	NA	NA	False	ATTAAA	-3	NA	64939704	64953530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901
ES.35377.1	chr9	-	4906	1	Antisense	novelGene_ENSMUSG00000032393.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	64954154	64949248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_64949200_64954200
ES.35378.1	chr9	+	177	1	Intergenic	novelGene_28775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGAAATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	64999679	64999856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_64999700_64999900
ES.35379.1	chr9	+	6195	20	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	-583	3	intron_retention	TRUE	canonical	0	0	junction_1	5.06686591434052	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTCTCTCTCTTTTTT	NA	False	NA	7	True	AATAAA	-15	NA	65008184	65045225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65008270_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034039_65034211_65035749_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.10	chr9	+	4446	10	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	26794	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.28030228539072	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACATGTTGCTCTCTCTC	2832	False	NA	1	True	AATAAA	-9	NA	65035610	65045219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65035987_65036061_65036164_65037844_65038029_65038604_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.11	chr9	+	6707	8	NIC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	26795	2	intron_retention	FALSE	canonical	3	8	junction_6	1.48461497791618	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCTCTCTCTCTTTTT	2833	False	NA	6	True	AATAAA	-14	NA	65035611	65045224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65035987_65036061_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.12	chr9	+	5024	9	NIC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	26797	2	intron_retention	FALSE	canonical	3	8	junction_7	2.61904085496962	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCTCTCTCTCTTTTT	2835	False	NA	6	True	AATAAA	-14	NA	65035613	65045224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65035987_65036061_65036164_65037844_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.13	chr9	+	4364	10	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	26842	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.44999653211129	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGCTCTCTCTCTTTTT	2880	False	NA	6	True	AATAAA	-14	NA	65035658	65045224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041902_65042393
ES.35379.14	chr9	+	4053	9	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	26960	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.52769256906871	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTGCTCTCTCTCTT	2998	False	NA	3	True	AATAAA	-11	NA	65035776	65045221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65035987_65036061_65036164_65037844_65037983_65038924_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.15	chr9	+	5257	8	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	27769	1	27720	-1	3prime_fragment	FALSE	canonical	3	6	junction_1	1.91662969499982	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTGCTCTCTCTCTT	3758	False	NA	3	True	AATAAA	-11	NA	65036536	65045221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.2	chr9	+	6804	20	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	-27	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	5.16648050181391	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTTGCTCTCTCTCTT	NA	False	NA	3	True	AATAAA	-11	NA	65008740	65045221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65008881_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029847_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034039_65034211_65035835_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.3	chr9	+	6221	20	FSM	ENSMUSG00000032816.16	ENSMUST00000035499.5	6223	20	2	0	2	0	multi-exon	FALSE	canonical	1	1	junction_1	4.95240505103063	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTGCTCTCTCTCTTT	NA	False	NA	4	True	AATAAA	-12	NA	65008769	65045222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65008881_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034036_65034211_65035749_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.4	chr9	+	4102	20	NNC	ENSMUSG00000032816.16	novel	6223	20	NA	NA	-2	113	intron_retention	FALSE	canonical	0	0	junction_5	5.00359981216848	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTGTAATGGACACGT	NA	False	NA	NA	False	NA	NA	NA	65008774	65042975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65008881_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029789_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034036_65034211_65035749_65035987_65036071_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.5	chr9	+	2961	12	ISM	ENSMUSG00000032816.16	ENSMUST00000035499.5	6223	20	27	8344	-10	-686	5prime_fragment	FALSE	canonical	1	1	junction_1	3.37956914462566	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTGTCCCACAGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	65008794	65036878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65008881_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034036_65034211_65035749_65035987_65036061
ES.35379.6	chr9	+	6177	20	NNC	ENSMUSG00000032816.16	novel	6220	20	NA	NA	722	3	intron_retention	FALSE	canonical	0	0	junction_1	5.01023882412727	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTCTCTCTCTTTTTT	NA	False	NA	7	True	AATAAA	-15	NA	65009538	65045225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65009603_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034036_65034211_65035749_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.35379.7	chr9	+	176	1	Intergenic	novelGene_28776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTAGGC	4958	False	NA	NA	False	NA	NA	NA	65026757	65026933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65026800_65026900
ES.35379.8	chr9	+	1305	4	NNC	ENSMUSG00000032816.16	novel	2572	10	NA	NA	22578	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGATTATGGAATTATAA	9595	False	NA	NA	False	NA	NA	NA	65031394	65034968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65031465_65031893_65032059_65032566_65032705_65034036
ES.35379.9	chr9	+	4438	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26834	-1	26785	1	3prime_fragment	FALSE	canonical	3	6	junction_3	2.94811092476036	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGCTCTCTCTCTTTT	2823	False	NA	5	True	AATAAA	-13	NA	65035601	65045223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ES.3538.1	chr10	+	1913	7	NIC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	97	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	453.194096264381	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTTAGTGTCTTCCAT	NA	False	NA	18	True	AATAAA	-27	NA	88566816	88579960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88566848_88567131_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.10	chr10	+	1165	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	331	584	331	-584	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTAGTTTATTTTGT	NA	False	NA	NA	False	AATACA	-22	NA	88567260	88579372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.11	chr10	+	1865	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	335	-120	335	120	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTCCTAGTTTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	88567264	88580076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.12	chr10	+	4118	4	NIC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	1352	5	intron_retention	FALSE	canonical	3	1168	junction_3	70.8660708661063	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTAGTGTCTTCCATT	NA	False	NA	19	True	AATAAA	-28	NA	88569091	88579961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.2	chr10	+	2079	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	-2	3	-2	-3	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAGATGTCTTTAGTGT	NA	False	NA	11	True	AATAAA	-20	NA	88566927	88579953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.4	chr10	+	1064	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	294	722	294	-722	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTGGTTGCATCTTG	NA	False	NA	34	True	ATTAAA	-36	NA	88567223	88579234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.6	chr10	+	849	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	321	910	321	-910	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATATAAAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	88567250	88579046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ES.3538.7	chr10	+	1747	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	322	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	487.520091893657	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGAGATGTCTTTAGTG	NA	False	NA	10	True	AATAAA	-19	NA	88567251	88579952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573058_88577768_88577948_88578884
ES.3538.8	chr10	+	1749	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	322	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	489.878107287925	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAGATGTCTTTAGTGT	NA	False	NA	11	True	AATAAA	-20	NA	88567251	88579953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577942_88578884
ES.35380.1	chr9	-	181	1	Intergenic	novelGene_28777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAACACAAA	3552	False	NA	NA	False	NA	NA	NA	65033507	65033326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65033300_65033500
ES.35381.1	chr9	+	4501	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-196	-1159	-196	1159	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGAGGTTTTTTTTTTTT	NA	False	NA	32	True	AATAAA	-21	NA	65048274	65094313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.10	chr9	+	4095	13	NNC	ENSMUSG00000032394.7	novel	3183	14	NA	NA	-53	1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.1817040079761	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048417	65094311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048821_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.11	chr9	+	4022	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-69	-770	-46	770	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGGTTAAGT	NA	False	NA	NA	False	AAGAAA	-15	NA	65048424	65093924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.14	chr9	+	4243	15	NNC	ENSMUSG00000032394.7	novel	3146	14	NA	NA	-1	1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9431754453439	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048469	65094311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048724_65048784_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.15	chr9	+	3933	14	NNC	ENSMUSG00000032394.7	novel	3146	14	NA	NA	-1	782	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	35.7030819281977	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGTGTATTCTTTAAA	NA	False	NA	NA	False	AAGAAA	-27	NA	65048469	65093936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048836_65051537_65051848_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.17	chr9	+	2998	15	NNC	ENSMUSG00000032394.7	novel	3183	14	NA	NA	5	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.768614983332	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAGAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048475	65093173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048526_65048747_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.19	chr9	+	3592	11	NNC	ENSMUSG00000032394.7	novel	762	2	NA	NA	-2635	1155	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	35.1296171342644	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGTGAGGTTTTTTTT	2886	False	NA	28	True	AATAAA	-17	NA	65085384	65094309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65085563_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.2	chr9	+	4473	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-129	-1161	-106	1161	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTTTTTTTTTTTTTT	NA	False	NA	34	True	AATAAA	-23	NA	65048364	65094315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.20	chr9	+	3524	11	NNC	ENSMUSG00000032394.7	novel	762	2	NA	NA	-2625	1157	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.742741255621	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	2896	False	NA	30	True	AATAAA	-19	NA	65085394	65094311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65085563_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.21	chr9	+	2369	11	NNC	ENSMUSG00000032394.7	novel	762	2	NA	NA	-2546	21	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	35.1296171342644	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAATTAAAAAAAAAA	2975	False	NA	NA	False	NA	NA	NA	65085473	65093175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65085563_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.22	chr9	+	3415	10	NNC	ENSMUSG00000032394.7	novel	762	2	NA	NA	-1867	1156	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.1812378014025	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGAGGTTTTTTTTT	3654	False	NA	29	True	AATAAA	-18	NA	65086152	65094310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65086291_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.23	chr9	+	3268	10	NNC	ENSMUSG00000032394.7	novel	762	2	NA	NA	-1780	1156	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	40.8686544136242	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGAGGTTTTTTTTT	3741	False	NA	29	True	AATAAA	-18	NA	65086239	65094310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65086291_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.24	chr9	+	1985	8	ISM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	39922	-21	396	21	3prime_fragment	FALSE	canonical	3	70	junction_5	18.0769330972951	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAATTAAAAAAAAAA	5917	False	NA	NA	False	NA	NA	NA	65088415	65093175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.3	chr9	+	3348	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	-123	-42	-100	42	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAACCCCCAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	65048370	65093196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.4	chr9	+	3248	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	-81	-21	-81	21	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048389	65093175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.5	chr9	+	5143	12	NIC	ENSMUSG00000032394.7	novel	3146	14	NA	NA	-78	1155	intron_retention	FALSE	canonical	3	39	junction_9	23.3369143257615	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACAGTGAGGTTTTTTTT	NA	False	NA	28	True	AATAAA	-17	NA	65048392	65094309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.6	chr9	+	4155	15	NNC	ENSMUSG00000032394.7	novel	3146	14	NA	NA	-70	1156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9431754453439	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGAGGTTTTTTTTT	NA	False	NA	29	True	AATAAA	-18	NA	65048400	65094310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048465_65048681_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.7	chr9	+	4195	15	NNC	ENSMUSG00000032394.7	novel	3183	14	NA	NA	-61	1157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.768614983332	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048409	65094311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048519_65048747_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35381.8	chr9	+	4544	13	NIC	ENSMUSG00000032394.7	novel	3146	14	NA	NA	-58	1157	intron_retention	FALSE	canonical	3	39	junction_10	22.4678783056068	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGAGGTTTTTTTTTT	NA	False	NA	30	True	AATAAA	-19	NA	65048412	65094311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ES.35381.9	chr9	+	3187	15	NNC	ENSMUSG00000032394.7	novel	3183	14	NA	NA	-57	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.768614983332	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048413	65093175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65048836_65051537_65051583_65051679_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ES.35382.1	chr9	+	3513	9	NNC	ENSMUSG00000032392.12	novel	1714	8	NA	NA	-1925	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5654402206582	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGTCTGTGACTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65100709	65146501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65101702_65117444_65117571_65122059_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.10	chr9	+	2365	2	ISM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	19845	799	19836	-5	3prime_fragment	FALSE	canonical	3	61	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTCAAGACACCCAAGAG	835	False	NA	0	True	AATAAA	-23	NA	65142271	65145707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65144065_65145135
ES.35382.2	chr9	+	3703	2	NNC	ENSMUSG00000032392.12	novel	1643	7	NA	NA	-1914	-19407	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTCAACTGTGAGGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	65100720	65104473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65101776_65101825
ES.35382.3	chr9	+	1407	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-21	1096	-21	-308	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGTACTGATTGCCTT	NA	False	NA	NA	False	NA	NA	NA	65121950	65145404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.4	chr9	+	2499	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	-20	3	-20	-3	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAAGTTGTCTGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	65121951	65146497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.5	chr9	+	2364	7	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-96	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	22.6255754991264	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAAGTTGTCTGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	65122330	65146497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65122390_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.6	chr9	+	2582	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	-66	2	-66	-2	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGTGACTGTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	65122360	65146504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.7	chr9	+	2539	4	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-60	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9316793501575	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACCAAGTTGTCTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	65122366	65146496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65122915_65133334_65133473_65137087_65137121_65144676
ES.35382.8	chr9	+	2143	7	NNC	ENSMUSG00000032392.12	novel	2518	6	NA	NA	-55	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.6255081250434	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAAGTTGTCTGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	65122371	65146497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65122431_65122851_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35382.9	chr9	+	1454	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	276	788	267	5	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGAGGGACTGTCGTG	NA	False	NA	11	True	AATAAA	-34	NA	65122702	65145718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ES.35383.1	chr9	-	180	1	Intergenic	novelGene_28778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	65127193	65127013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65127000_65127200
ES.35384.1	chr9	-	175	1	Intergenic	novelGene_28779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAGAATGAGAC	NA	False	NA	NA	False	NA	NA	NA	65149380	65149205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65149200_65149400
ES.35385.1	chr9	+	183	1	Intergenic	novelGene_28780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65156443	65156626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65156400_65156600
ES.35386.1	chr9	+	193	1	Intergenic	novelGene_28781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATAATATA	NA	False	NA	NA	False	NA	NA	NA	65164100	65164293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65164100_65164300
ES.35387.1	chr9	-	171	1	Intergenic	novelGene_28782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65182303	65182132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65182100_65182300
ES.35388.1	chr9	+	2496	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	0	389	0	-389	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATTGTTTAGTGTTAC	6151	False	NA	27	True	AATAAA	-23	NA	65201541	65237550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.10	chr9	+	2152	13	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-2	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	129.414922718449	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6184	False	NA	18	True	AATAAA	-14	NA	65201574	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219381_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65231488_65231582_65234063_65234171_65237095
ES.35388.11	chr9	+	5788	12	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-2	-398	intron_retention	FALSE	canonical	0	0	junction_6	108.0076520093	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6184	False	NA	18	True	AATAAA	-14	NA	65201574	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65219422_65223925_65224103_65224610_65224776_65225925_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.12	chr9	+	5769	12	NIC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-2	-398	intron_retention	FALSE	canonical	3	317	junction_10	32.5027652987575	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6184	False	NA	18	True	AATAAA	-14	NA	65201574	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.13	chr9	+	2152	13	ISM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	34	3624	-1	-3624	5prime_fragment	FALSE	canonical	3	317	junction_12	30.2833837827501	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTTGTGACTCATTT	6185	False	NA	NA	False	GATAAA	-19	NA	65201575	65234315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063
ES.35388.14	chr9	+	2405	13	NNC	ENSMUSG00000015357.11	novel	2809	13	NA	NA	-1	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	124.640705853086	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6185	False	NA	18	True	AATAAA	-14	NA	65201575	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231494_65231582_65234063_65234171_65237095
ES.35388.16	chr9	+	4235	13	NIC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	1	-400	intron_retention	FALSE	canonical	3	317	junction_11	31.3776282653032	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTGGGATCCCATTG	6187	False	NA	16	True	AATAAA	-12	NA	65201577	65237539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.17	chr9	+	2466	14	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	5	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.4983274219387	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6191	False	NA	18	True	AATAAA	-14	NA	65201581	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225925_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.2	chr9	+	4497	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	17	-1629	17	1628	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTGTGTGCTTTTGTTC	6168	False	NA	NA	False	ATTAAA	-18	NA	65201558	65239568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.21	chr9	+	2417	14	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	5	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	99.8617979921494	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6228	False	NA	18	True	AATAAA	-14	NA	65201618	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234178_65237095
ES.35388.22	chr9	+	5191	12	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	7566	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	105.720276482348	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTTTTCTAAAGTCCT	627	False	NA	NA	False	AATAAA	-14	NA	65209179	65237922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65235381_65235462
ES.35388.23	chr9	+	1137	8	ISM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	22487	666	6630	-665	3prime_fragment	FALSE	canonical	3	317	junction_6	35.8784797075134	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCGGATATCATACATG	8699	False	NA	NA	False	ATTAAA	-12	NA	65224063	65237274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.24	chr9	+	162	1	Intergenic	novelGene_28784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	65226915	65227077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65226900_65227100
ES.35388.25	chr9	+	158	1	Intergenic	novelGene_28785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	65227520	65227678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65227500_65227700
ES.35388.3	chr9	+	2464	14	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-16	-400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	99.8767287547282	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTGGGATCCCATTG	6170	False	NA	16	True	AATAAA	-12	NA	65201560	65237539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217598_65219385_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.4	chr9	+	2431	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-14	392	-14	-391	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCCATTGTTTAGTGTT	6172	False	NA	25	True	AATAAA	-21	NA	65201562	65237548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.5	chr9	+	2935	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	25	-75	-10	74	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATTGGCATATAATTG	6176	False	NA	NA	False	TATAAA	-15	NA	65201566	65238014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.6	chr9	+	2198	14	NNC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-10	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.5481067786283	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6176	False	NA	18	True	AATAAA	-14	NA	65201566	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65201584_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.7	chr9	+	2809	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	-9	9	-9	-8	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGTCCTCAATTTGTT	6177	False	NA	NA	False	AATAAA	-23	NA	65201567	65237931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.8	chr9	+	2254	12	NIC	ENSMUSG00000015357.11	novel	2809	13	NA	NA	-4	-398	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	108.392613575308	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGGGATCCCATTGTT	6182	False	NA	18	True	AATAAA	-14	NA	65201572	65237541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ES.35388.9	chr9	+	3941	12	NIC	ENSMUSG00000015357.11	novel	2885	14	NA	NA	-4	-3624	intron_retention	FALSE	canonical	3	317	junction_11	30.8260917711652	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTTGTGACTCATTT	6182	False	NA	NA	False	GATAAA	-19	NA	65201572	65234315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063
ES.35389.1	chr9	-	182	1	Intergenic	novelGene_28783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAGTACAATGAGTATA	NA	False	NA	NA	False	NA	NA	NA	65207848	65207666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65207700_65207800
ES.3539.1	chr10	-	4303	1	Genic_Genomic	ENSMUSG00000112428.2	novel	NA	NA	NA	NA	5734	1912	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTCAGTCTGTCGTG	NA	False	NA	NA	False	NA	NA	NA	88488358	88484055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_88484100_88488400
ES.3539.10	chr10	-	2080	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520909	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.11	chr10	-	1669	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520893	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.12	chr10	-	2595	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	169	junction_3	157.700841962101	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520891	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88520827
ES.3539.13	chr10	-	1966	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	210.086291794586	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520891	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88520827
ES.3539.14	chr10	-	1573	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	-2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	207.134416905223	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520893	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88520827
ES.3539.15	chr10	-	1679	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	88520891	88510636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
ES.3539.16	chr10	-	2103	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	185.213390444644	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	88520894	88510636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513796_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.17	chr10	-	4435	3	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	446	junction_2	13	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	88520891	88510636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88516437_88520827
ES.3539.18	chr10	-	1334	7	NNC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	50	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	216.646152875041	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCTCTTGCTATGCA	NA	False	NA	6	True	AATAAA	-33	NA	88520827	88511122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836_88518864_88520745
ES.3539.19	chr10	-	1187	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	5	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGACTGTCTCTTGC	NA	False	NA	0	True	AATAAA	-27	NA	88520891	88511128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
ES.3539.2	chr10	-	231	2	Intergenic	novelGene_2704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTCCTTTGTCACTGC	1465	False	NA	NA	False	NA	NA	NA	88582292	88484927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88484965_88582098
ES.3539.20	chr10	-	1286	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-18	-622	-18	4	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTAGACTGTCTCTTG	NA	False	NA	-1	True	AATAAA	-26	NA	88520895	88511129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.21	chr10	-	3128	6	NNC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-14	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	238.165824584469	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTAGACTGTCTCTT	NA	False	NA	-2	True	AATAAA	-25	NA	88520891	88511130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88518836_88520305_88520352
ES.3539.22	chr10	-	1300	7	NNC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	216.171999420215	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520891	88511133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836_88518859_88520827
ES.3539.23	chr10	-	1596	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_2	183.281204710139	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520893	88511133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513787_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.24	chr10	-	1468	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	210.086291794586	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520891	88511133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88520827
ES.3539.25	chr10	-	4841	3	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	380	junction_1	33	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGCATTTGTAGACTG	NA	False	NA	-8	True	AATAAA	-19	NA	88520891	88511136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88515818_88516340_88516437_88520827
ES.3539.26	chr10	-	3294	3	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	8	-3	intron_retention	FALSE	canonical	3	169	junction_2	151.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGCATTTGTAGACTG	NA	False	NA	-8	True	AATAAA	-19	NA	88520869	88511136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88515818_88520827
ES.3539.27	chr10	-	1164	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-5	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520891	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.28	chr10	-	2188	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-18	-5	intron_retention	FALSE	canonical	0	0	junction_1	202.343149130382	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520895	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511929_88513361_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.29	chr10	-	2092	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	169	junction_3	157.700841962101	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520891	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88520827
ES.3539.3	chr10	-	175	1	Intergenic	novelGene_2705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAAGTAG	3488	False	NA	NA	False	NA	NA	NA	88500675	88500500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88500500_88500700
ES.3539.30	chr10	-	3935	3	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-16	-5	intron_retention	FALSE	canonical	3	446	junction_2	13	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520893	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88516437_88520827
ES.3539.31	chr10	-	5180	5	ISM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	470	-613	470	-5	3prime_fragment	FALSE	canonical	3	380	junction_4	52.8411534696206	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520407	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340
ES.3539.32	chr10	-	1559	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAAGCATTTGTAGAC	NA	False	NA	-10	True	AATAAA	-17	NA	88520891	88511138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.33	chr10	-	1580	7	NNC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	227.203286361209	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGAAAGCATTTGTAGA	NA	False	NA	-11	True	AATAAA	-16	NA	88520891	88511139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88518836_88518859_88520827
ES.3539.34	chr10	-	1489	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_2	212.398652302692	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAACTGAAAGCATTTGT	NA	False	NA	-14	True	AATAAA	-13	NA	88520891	88511142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513787_88514385_88514499_88515720_88515818_88520827
ES.3539.35	chr10	-	1219	7	NNC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-16	-119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	216.88380145445	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGTATCCAAGAACATC	NA	False	NA	NA	False	AATAAA	-17	NA	88520893	88511252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836_88518895_88520827
ES.3539.36	chr10	-	8757	1	Genic_Genomic	ENSMUSG00000004359.17	novel	NA	NA	NA	NA	-14	-383	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCCATATCATTTAGG	NA	False	NA	NA	False	NA	NA	NA	88520891	88512134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_88512100_88520900
ES.3539.37	chr10	-	2625	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	-18	-383	intron_retention	FALSE	canonical	3	380	junction_2	60.5383257853146	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTCCATATCATTTAGG	NA	False	NA	NA	False	NA	NA	NA	88520895	88512134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.38	chr10	-	1674	5	ISM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-14	415	-14	-415	5prime_fragment	FALSE	canonical	3	380	junction_3	52.5327278941423	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88520891	88512166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.39	chr10	-	161	1	Intergenic	novelGene_2707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	88524183	88524022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88524000_88524200
ES.3539.4	chr10	-	157	2	Antisense	novelGene_ENSMUSG00000112885.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	251	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	88524182	88500518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_88500546_88524052
ES.3539.40	chr10	-	177	1	Intergenic	novelGene_2709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1466	False	NA	NA	False	NA	NA	NA	88582291	88582114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_88582100_88582300
ES.3539.5	chr10	-	2693	5	NIC	ENSMUSG00000004359.17	novel	1763	6	NA	NA	-14	0	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520891	88510633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.6	chr10	-	2786	6	NIC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-14	0	intron_retention	FALSE	canonical	1	2	junction_1	224.827400465335	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520891	88510633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88512734_88512828_88513361_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.7	chr10	-	1805	7	NNC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	216.408885112316	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520893	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836_88518864_88520827
ES.3539.8	chr10	-	1779	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	-17	-1116	-17	-2	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520894	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.3539.9	chr10	-	1872	7	NIC	ENSMUSG00000004359.17	novel	1356	7	NA	NA	-17	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	216.771769379687	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	88520894	88510635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88511933_88512734_88512828_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ES.35390.1	chr9	-	179	1	Intergenic	novelGene_28786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	65238473	65238294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65238300_65238500
ES.35391.1	chr9	+	2463	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	-33	-11	-33	11	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTATTCCCTCTCAAAT	NA	False	NA	53	True	AATAAA	-36	NA	65253352	65266936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ES.35391.2	chr9	+	2275	6	NNC	ENSMUSG00000041837.5	novel	2419	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.452690978297	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	False	NA	41	True	AATAAA	-24	NA	65253385	65266924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65253557_65253699_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ES.35391.3	chr9	+	2285	6	NNC	ENSMUSG00000041837.5	novel	861	6	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.452690978297	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGAGCCTTTGCCCCT	NA	False	NA	34	True	AATAAA	-17	NA	65253390	65266917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65253744_65253864_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ES.35391.4	chr9	+	2402	5	NNC	ENSMUSG00000041837.5	novel	2419	5	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	118.269554408563	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	False	NA	41	True	AATAAA	-24	NA	65253400	65266924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264081_65265869
ES.35391.5	chr9	+	6001	5	NNC	ENSMUSG00000041837.5	novel	2419	5	NA	NA	15	-2	intron_retention	FALSE	canonical	0	0	junction_1	130.930324982412	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTGCCCCTGATTTA	NA	False	NA	40	True	AATAAA	-23	NA	65253400	65266923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65257890_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ES.35391.6	chr9	+	4190	4	ISM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	16	1	16	-1	intron_retention	FALSE	canonical	3	267	junction_1	4.24264068711928	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	False	NA	41	True	AATAAA	-24	NA	65253401	65266924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999
ES.35391.7	chr9	+	5455	3	ISM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	6352	1	5802	-1	intron_retention	FALSE	canonical	3	276	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	False	NA	41	True	AATAAA	-24	NA	65259737	65266924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65262031_65263526_65263764_65263999
ES.35392.1	chr9	-	178	1	Intergenic	novelGene_28787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATCCTTAATGAAA	NA	False	NA	NA	False	NA	NA	NA	65275424	65275246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65275200_65275400
ES.35393.1	chr9	+	1232	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-233	-153	-233	153	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAGGTGTAGTGACAC	NA	False	NA	17	True	NA	NA	NA	65278894	65285484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ES.35393.11	chr9	+	930	3	NIC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-89	97	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	422	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAACAGTAAT	NA	False	NA	-39	True	NA	NA	NA	65279038	65285428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65279411_65281031_65281242_65285080
ES.35393.12	chr9	+	796	4	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-79	97	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	402.348936455245	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAACAGTAAT	NA	False	NA	-39	True	NA	NA	NA	65279048	65285428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65279185_65281031_65281242_65284190_65284293_65285080
ES.35393.13	chr9	+	1112	5	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-67	97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	427.503801152691	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAACAGTAAT	NA	False	NA	-39	True	NA	NA	NA	65279060	65285428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65279411_65280840_65280943_65281031_65281242_65284190_65284293_65285080
ES.35393.2	chr9	+	3238	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-226	-2166	-226	-162	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278901	65287497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ES.35393.3	chr9	+	2193	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-148	-1199	-148	-1129	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGCATTCATTTAAATAA	NA	False	NA	NA	False	AATGAA	-38	NA	65278979	65286530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ES.35393.4	chr9	+	981	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-141	6	-141	-6	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTAGGGCTGCAGAGGC	NA	False	NA	27	True	NA	NA	NA	65278986	65285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ES.35393.5	chr9	+	2536	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	-141	-1549	-141	-779	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACGCTGGTTGACTGGG	NA	False	NA	NA	False	NA	NA	NA	65278986	65286880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ES.35393.6	chr9	+	6102	3	NIC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-141	-162	intron_retention	FALSE	canonical	3	844	junction_1	7	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278986	65287497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65279411_65281031_65284293_65285080
ES.35393.7	chr9	+	3200	4	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-141	-162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	402.820334916476	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278986	65287497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65279458_65281031_65281242_65284190_65284293_65285080
ES.35393.8	chr9	+	4145	4	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-141	-162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	401.205959853817	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTTTTCTCATTCA	NA	False	NA	NA	False	NA	NA	NA	65278986	65287497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65279411_65281031_65281242_65283198_65284293_65285080
ES.35393.9	chr9	+	1059	4	NNC	ENSMUSG00000086228.4	novel	846	4	NA	NA	-110	97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	401.205959853817	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAACAGTAAT	NA	False	NA	-39	True	NA	NA	NA	65279017	65285428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65279411_65281031_65281242_65284184_65284293_65285080
ES.35394.1	chr9	-	3828	1	Antisense	novelGene_ENSMUSG00000086228.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCAAGATCAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	65286998	65283170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65283200_65287000
ES.35394.2	chr9	-	3016	2	Antisense	novelGene_ENSMUSG00000086228.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65286998	65283194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65284289_65285076
ES.35395.1	chr9	+	2139	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	-24	-73	-24	73	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTAGTTAAGTGACTT	NA	False	NA	NA	False	AATGAA	-18	NA	65343039	65360409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.10	chr9	+	2535	8	NNC	ENSMUSG00000059183.13	novel	2563	8	NA	NA	-3	-3	intron_retention	FALSE	canonical	2	5	junction_2	51.228977769084	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGCTTGTATCCTTTG	NA	False	NA	24	True	AATAAA	-25	NA	65343066	65359696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65343290_65344269_65344452_65346811_65346935_65347627_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.11	chr9	+	941	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-2	11686	-2	-6546	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGACTGGAATTGGG	NA	False	NA	NA	False	NA	NA	NA	65343067	65348013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
ES.35395.12	chr9	+	2672	8	NIC	ENSMUSG00000059183.13	novel	2563	8	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	2	junction_4	52.8648643008853	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGCTTGTATCCTTTG	NA	False	NA	24	True	AATAAA	-25	NA	65343068	65359696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65349082_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.13	chr9	+	2543	8	FSM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	16	4	16	-4	multi-exon	FALSE	canonical	3	114	junction_4	22.2545569743019	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGAGCTTGTATCCTTT	NA	False	NA	23	True	AATAAA	-24	NA	65343085	65359695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.14	chr9	+	2119	9	NIC	ENSMUSG00000059183.13	novel	2042	9	NA	NA	17	-11	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	49.5025251881154	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAACAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	65343086	65360325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65349082_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.15	chr9	+	5790	7	NIC	ENSMUSG00000059183.13	novel	2563	8	NA	NA	20	-6	intron_retention	FALSE	canonical	3	114	junction_4	24.0323855569012	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGAGCTTGTATCCT	NA	False	NA	21	True	AATAAA	-22	NA	65343089	65359693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65348971_65351160_65354585_65355977_65356061_65359286
ES.35395.2	chr9	+	1412	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	-10	640	-10	-3	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGCTTGTATCCTTTG	NA	False	NA	24	True	AATAAA	-25	NA	65343053	65359696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.3	chr9	+	1177	4	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-13	11461	-7	-6321	5prime_fragment	FALSE	canonical	3	143	junction_2	18.6607133363712	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATAGGTGATCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	65343056	65348238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627
ES.35395.4	chr9	+	3201	8	FSM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-8	-630	-2	-7	multi-exon	FALSE	canonical	3	114	junction_4	22.2545569743019	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAAAGGCCTG	NA	False	NA	NA	False	NA	NA	NA	65343061	65360329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.5	chr9	+	5114	8	Fusion	ENSMUSG00000111722.2_ENSMUSG00000059183.13	novel	2563	8	NA	NA	-2	1795	intron_retention	FALSE	canonical	1	2	junction_4	52.8648643008853	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCTTCATATCTTCAT	NA	False	NA	NA	False	NA	NA	NA	65343061	65362131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65349082_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.6	chr9	+	3839	9	FSM	ENSMUSG00000111722.2_ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	-1797	0	1797	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCATATCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	65343063	65362133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.7	chr9	+	4975	8	Fusion	ENSMUSG00000111722.2_ENSMUSG00000059183.13	novel	2042	9	NA	NA	0	1797	intron_retention	FALSE	canonical	2	5	junction_2	51.228977769084	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTCATATCTTCATTT	NA	False	NA	NA	False	NA	NA	NA	65343063	65362133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65343290_65344269_65344452_65346811_65346935_65347627_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ES.35395.9	chr9	+	1774	2	ISM	ENSMUSG00000059183.13	ENSMUST00000132966.8	2563	8	-6	13882	0	-8742	5prime_fragment	FALSE	canonical	3	184	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTCATTTTATTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	65343063	65345817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65343290_65344269
ES.35396.1	chr9	-	176	1	Intergenic	novelGene_28788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	65346096	65345920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65345900_65346100
ES.35397.1	chr9	+	3144	10	Fusion	ENSMUSG00000111722.2_ENSMUSG00000032388.8	novel	2680	9	NA	NA	-1641	-1009	multi-exon	FALSE	canonical	0	0	junction_1	251.640739405199	244	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTGTGATGAGTGAG	5535	False	NA	16	True	AATAAA	-18	NA	65366587	65394743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65367748_65367915_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ES.35397.10	chr9	+	3908	8	FSM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	4	-2610	4	-1012	multi-exon	FALSE	canonical	3	680	junction_7	64.9018096662888	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCTTCTGTGATGAGT	7186	False	NA	13	True	AATAAA	-15	NA	65368238	65394740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723
ES.35397.11	chr9	+	6042	8	NIC	ENSMUSG00000032388.8	novel	2680	9	NA	NA	10	-1015	intron_retention	FALSE	canonical	3	680	junction_6	63.7290181557981	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGGCTTCTGTGATG	7192	False	NA	10	True	AATAAA	-12	NA	65368244	65394737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65387770_65389142_65389251_65391723_65391865_65394114
ES.35397.12	chr9	+	1483	8	NIC	ENSMUSG00000032388.8	novel	2680	9	NA	NA	13	-1016	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	278.373189537105	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCAGTGGCTTCTGTGAT	7195	False	NA	9	True	AATAAA	-11	NA	65368247	65394736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65368437_65372545_65372633_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ES.35397.13	chr9	+	1451	8	NNC	ENSMUSG00000032388.8	novel	1302	8	NA	NA	13	-2219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	279.009911315431	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCATTCTGGAAAGGT	7195	False	NA	NA	False	ATTAAA	-30	NA	65368247	65389911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65389342
ES.35397.14	chr9	+	1200	8	NIC	ENSMUSG00000032388.8	novel	2680	9	NA	NA	23	-1310	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	279.009911315431	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTGTGAAAATTTTGC	7205	False	NA	6	True	TTTAAA	-38	NA	65368257	65394442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65394114
ES.35397.15	chr9	+	6360	7	ISM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	29	1014	23	-1014	intron_retention	FALSE	canonical	3	707	junction_5	58.5075968476649	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7205	False	NA	11	True	AATAAA	-13	NA	65368257	65394738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142
ES.35397.16	chr9	+	1582	9	NNC	ENSMUSG00000032388.8	novel	484	5	NA	NA	-106	-1017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.348329537855	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGTGGCTTCTGTGA	8973	False	NA	8	True	AATAAA	-10	NA	65370025	65394735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65370153_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ES.35397.17	chr9	+	5069	4	NIC	ENSMUSG00000032388.8	novel	2680	9	NA	NA	5583	-1014	intron_retention	FALSE	canonical	3	707	junction_1	57.913728942281	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	9952	False	NA	11	True	AATAAA	-13	NA	65381653	65394738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65383268_65387660_65387770_65389142_65391865_65394114
ES.35397.18	chr9	+	871	3	ISM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	20913	1017	13071	-1017	3prime_fragment	FALSE	canonical	3	680	junction_1	79.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGTGGCTTCTGTGA	NA	False	NA	8	True	AATAAA	-10	NA	65389141	65394735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65389251_65391723_65391865_65394114
ES.35397.2	chr9	+	3312	5	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	-14	6243	-8	2667	5prime_fragment	FALSE	canonical	3	746	junction_3	44.0823093768918	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTGGGGCAGAATTC	7168	False	NA	NA	False	AAAAAG	-4	NA	65368220	65385887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121
ES.35397.5	chr9	+	5405	4	NIC	ENSMUSG00000032388.8	novel	1302	8	NA	NA	1	-3979	intron_retention	FALSE	canonical	1	1	junction_2	397.917914483209	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGCTAATTAATGAA	7177	False	NA	NA	False	NA	NA	NA	65368229	65388151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65368437_65372545_65372633_65380919_65381001_65383121
ES.35397.6	chr9	+	2617	10	NNC	ENSMUSG00000032388.8	novel	2680	9	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	251.640739405199	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAAGGGGTTTTATTC	7183	False	NA	NA	False	AATAAA	-16	NA	65368235	65395752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114_65395525_65395580
ES.35397.7	chr9	+	7754	6	ISM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	8	1014	2	-1014	intron_retention	FALSE	canonical	3	707	junction_5	58.3403805266987	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGGCTTCTGTGATGA	7184	False	NA	11	True	AATAAA	-13	NA	65368236	65394738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660
ES.35397.8	chr9	+	1410	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	9	1261	3	-1261	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAGCTTGGGATCATGT	7185	False	NA	55	True	NA	NA	NA	65368237	65394491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ES.35397.9	chr9	+	1165	6	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	4	3979	4	-3979	5prime_fragment	FALSE	canonical	3	707	junction_5	58.3403805266987	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGCTAATTAATGAA	7186	False	NA	NA	False	NA	NA	NA	65368238	65388151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660
ES.35398.1	chr9	-	3897	1	Antisense	novelGene_ENSMUSG00000032388.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCTGCAAAGCTAAAGCA	NA	False	NA	NA	False	NA	NA	NA	65373829	65369932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65369900_65373800
ES.35399.1	chr9	-	154	1	Intergenic	novelGene_28789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	65374587	65374433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65374400_65374600
ES.354.1	chr1	-	3371	21	NNC	ENSMUSG00000003134.11	novel	3512	19	NA	NA	1	3997	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.701977290687	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACGGAAATGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	39517835	39406575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39406648_39407001_39407146_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.10	chr1	-	3887	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	17027	3	intron_retention	FALSE	canonical	0	0	junction_19	14.3177243274515	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTAAAATGTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	39500715	39410944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39500591
ES.354.11	chr1	-	4089	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	23	3	intron_retention	FALSE	canonical	2	2	junction_7	13.8572060915908	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTAAAATGTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	39517813	39410944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419208_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.12	chr1	-	3990	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	17	3	intron_retention	TRUE	canonical	1	1	junction_7	20.6679325260909	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTAAAATGTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	39517819	39410944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39420357_39420644_39423310_39423369_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.13	chr1	-	4159	21	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	13	3	intron_retention	FALSE	canonical	0	0	junction_12	20.6434008826065	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTTTAAAATGTCATT	NA	False	NA	-3	True	AATAAA	-18	NA	39517823	39410944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428528_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39514883_39514989_39517520
ES.354.14	chr1	-	3935	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_9	14.3177243274515	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTTTAAAATGTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	39517823	39410945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420514_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.15	chr1	-	3943	21	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	19332	2	intron_retention	FALSE	canonical	0	0	junction_19	17.5655913649384	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTTTAAAATGTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	39498410	39410945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39497984_39498075_39498319
ES.354.16	chr1	-	3718	18	NIC	ENSMUSG00000003134.11	novel	3434	19	NA	NA	12	2	intron_retention	FALSE	canonical	0	0	junction_16	14.9237972106093	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTTTAAAATGTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	39517824	39410945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39465148_39465260_39517520
ES.354.17	chr1	-	4443	22	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_10	22.3914868824573	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTTTAAAATGTCAT	NA	False	NA	-4	True	AATAAA	-17	NA	39517833	39410945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39423310_39423574_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39514883_39514989_39517520
ES.354.19	chr1	-	3885	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	19299	1	intron_retention	FALSE	canonical	0	0	junction_19	14.3177243274515	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTTTTTTAAAATGTCA	NA	False	NA	-5	True	AATAAA	-16	NA	39498443	39410946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39498319
ES.354.2	chr1	-	4465	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	-14	0	-14	0	multi-exon	FALSE	canonical	3	38	junction_12	7.9882184715386	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCACGTATTTCTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	39517850	39410572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.21	chr1	-	5306	16	NIC	ENSMUSG00000003134.11	novel	3434	19	NA	NA	-12855	-1	intron_retention	FALSE	canonical	3	38	junction_12	8.59302042357633	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTTTTTTAAAATGT	5702	False	NA	-7	True	AATAAA	-14	NA	39444567	39410948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39433354_39441763_39442005_39444371
ES.354.22	chr1	-	4073	22	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	19327	-1	intron_retention	FALSE	canonical	0	0	junction_19	20.0133742130679	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTTTTTTAAAATGT	NA	False	NA	-7	True	AATAAA	-14	NA	39498415	39410948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39481035_39481164_39497984_39498075_39498319
ES.354.23	chr1	-	5027	21	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	25	-2	intron_retention	FALSE	canonical	0	0	junction_12	20.5316219524907	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGACTTTTTTAAAATG	NA	False	NA	-8	True	AATAAA	-13	NA	39517811	39410949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39423310_39424320_39425078_39425294_39428388_39428540_39430030_39430118_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.24	chr1	-	132	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAACCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	39412220	39412088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39412100_39412200
ES.354.25	chr1	-	3570	19	FSM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-46	-12	9	12	multi-exon	FALSE	canonical	3	38	junction_11	8.13011472441188	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGCACTTTTTTCTC	NA	False	NA	NA	False	CATAAA	-31	NA	39517827	39412384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.26	chr1	-	4434	19	NNC	ENSMUSG00000003134.11	novel	3512	19	NA	NA	25	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	14.4188876473761	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGAACAGTGTGGC	NA	False	NA	NA	False	CATAAA	-20	NA	39517811	39412395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39423310_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.27	chr1	-	3241	18	ISM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	-65	593	-10	-593	5prime_fragment	FALSE	canonical	3	38	junction_10	8.334694237204	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTAGTGTGGCATC	NA	False	NA	NA	False	AAAAAG	-22	NA	39517846	39412989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.28	chr1	-	4355	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGCTAAGTTAAACTCT	NA	False	NA	NA	False	NA	NA	NA	39508583	39504228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39504200_39508600
ES.354.29	chr1	-	5465	1	NIC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	13	-82080	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTGTATGAATGTT	NA	False	NA	NA	False	NA	NA	NA	39517823	39512358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39512400_39517800
ES.354.4	chr1	-	3954	20	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	16996	6	intron_retention	TRUE	canonical	0	0	junction_19	17.8516509164618	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAATGTCATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	39500746	39410941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419208_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39500591
ES.354.5	chr1	-	4081	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	1	369	1	6	multi-exon	FALSE	canonical	3	38	junction_12	7.9882184715386	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAATGTCATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	39517835	39410941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.6	chr1	-	4212	21	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	13	6	intron_retention	TRUE	canonical	0	0	junction_18	17.8305215851921	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAATGTCATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	39517823	39410941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39459821_39459965_39465148_39465260_39517520
ES.354.7	chr1	-	3735	18	NIC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	13	5	intron_retention	FALSE	canonical	0	0	junction_9	14.998269796407	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTAAAATGTCATTTT	NA	False	NA	-1	True	AATAAA	-20	NA	39517823	39410942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.8	chr1	-	3947	19	NIC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	3	4	intron_retention	FALSE	canonical	1	1	junction_7	14.4253078363285	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTAAAATGTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	39517833	39410943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.354.9	chr1	-	3547	21	NNC	ENSMUSG00000003134.11	novel	4451	20	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.701977290687	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTTAAAATGTCATTT	NA	False	NA	-2	True	AATAAA	-19	NA	39517843	39410943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39411219_39411320_39411430_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ES.3540.1	chr10	+	3253	2	Antisense	novelGene_ENSMUSG00000004356.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGTACCTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	88583137	88587194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_88583284_88584087
ES.35400.1	chr9	+	220	1	Intergenic	novelGene_28790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTTTCAACTAAACG	NA	False	NA	NA	False	NA	NA	NA	65478744	65478964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65478700_65479000
ES.35401.1	chr9	+	181	1	Intergenic	novelGene_28791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	65481463	65481644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65481500_65481600
ES.35401.10	chr9	+	3058	6	ISM	ENSMUSG00000041064.15	ENSMUST00000154970.9	3725	12	-39	4726	-6	744	5prime_fragment	FALSE	canonical	3	85	junction_2	12.2049170419139	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494435	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229
ES.35401.100	chr9	+	4566	3	NNC	ENSMUSG00000032387.16	novel	600	2	NA	NA	-5349	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	849.5	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTGCTTCTACGA	9614	False	NA	19	True	AATAAA	-19	NA	65560909	65567813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65561408_65563512_65566487_65566719
ES.35401.101	chr9	+	6505	2	FSM	ENSMUSG00000032387.16	ENSMUST00000216769.2	600	2	-5188	-717	-5188	0	multi-exon	FALSE	canonical	3	1699	junction_1	0	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	9775	False	NA	14	True	AATAAA	-14	NA	65561070	65567808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65566487_65566719
ES.35401.102	chr9	+	4363	4	NNC	ENSMUSG00000032387.16	novel	600	2	NA	NA	-3112	7104	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	800.916280823963	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTAAAGTTTTATCACAG	NA	False	NA	NA	False	ACTAAA	-44	NA	65563146	65574914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65564670_65564768_65566487_65566719_65567804_65574876
ES.35401.103	chr9	+	1643	5	NNC	ENSMUSG00000040652.17	novel	865	2	NA	NA	-35	-4	intron_retention	FALSE	canonical	0	0	junction_1	162.105675409592	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTGGTCTGTCTTTTT	4569	False	NA	19	True	AATAAA	-13	NA	65583794	65597578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65583816_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.104	chr9	+	1855	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTCTGTCTTTTTATT	4592	False	NA	22	True	AATAAA	-16	NA	65583817	65597581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.105	chr9	+	1727	4	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	8	junction_3	184.788768297451	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	4635	False	NA	23	True	AATAAA	-17	NA	65583860	65597582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596376
ES.35401.106	chr9	+	1497	3	NNC	ENSMUSG00000040652.17	novel	1095	3	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_2	211.5	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTGGTCTGTCTTTTT	4635	False	NA	19	True	AATAAA	-13	NA	65583860	65597578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65584048_65593477_65593586_65596376
ES.35401.107	chr9	+	967	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	2	-61	intron_retention	FALSE	canonical	3	365	junction_4	22.3983816379666	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATTAGAAGCTTTT	4637	False	NA	NA	False	AGTAAA	-15	NA	65583862	65596738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.108	chr9	+	3466	2	NNC	ENSMUSG00000040652.17	novel	865	2	NA	NA	4	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGGTCTGTCTTTTTA	4639	False	NA	20	True	AATAAA	-14	NA	65583864	65597579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65584491_65594739
ES.35401.11	chr9	+	3571	11	NNC	ENSMUSG00000041064.15	novel	3680	12	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_7	41.2087369376932	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494443	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499122_65500568_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.12	chr9	+	3430	3	NNC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	3	744	intron_retention	FALSE	canonical	2	2	junction_1	53	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494444	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65496420_65496943_65497110_65497229
ES.35401.13	chr9	+	3231	4	FSM	ENSMUSG00000041064.15	ENSMUST00000152885.8	2450	4	-37	-744	8	744	multi-exon	FALSE	canonical	3	99	junction_1	7.34846922834953	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494449	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65495677_65496286_65496887_65496994_65497110_65497229
ES.35401.14	chr9	+	5541	6	NIC	ENSMUSG00000041064.15	novel	3897	10	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	7	junction_2	50.7251416952186	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAACTGTGCCTCCTGCC	NA	False	NA	21	True	AATAAA	-11	NA	65494453	65503243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65501861_65502062
ES.35401.15	chr9	+	3648	5	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-8	744	intron_retention	FALSE	canonical	3	85	junction_1	13.6450540489952	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494455	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229
ES.35401.16	chr9	+	5103	10	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	64	junction_5	27.2102014275601	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494459	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65501861_65502062
ES.35401.17	chr9	+	3252	4	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-4	744	intron_retention	FALSE	canonical	3	85	junction_2	9.46337971105226	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494459	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65497110_65497229
ES.35401.18	chr9	+	3581	11	NIC	ENSMUSG00000041064.15	novel	3680	12	NA	NA	-4	0	intron_retention	FALSE	canonical	2	4	junction_2	40.9659614802338	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494459	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.19	chr9	+	3144	5	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-4	744	intron_retention	FALSE	canonical	3	85	junction_2	11.8189466535728	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494459	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496887_65496994_65497110_65497229
ES.35401.2	chr9	+	161	2	Intergenic	novelGene_28792	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	65481464	65528027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65481590_65527991
ES.35401.20	chr9	+	3375	13	FSM	ENSMUSG00000041064.15	ENSMUST00000134538.9	3395	13	21	-1	-1	1	multi-exon	FALSE	canonical	2	4	junction_1	37.6787406902088	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494462	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65494534_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.21	chr9	+	3669	12	NNC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_3	47.0847661841022	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494465	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496800_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.22	chr9	+	3933	2	NIC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	2	744	intron_retention	FALSE	canonical	3	108	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494465	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65497110_65497229
ES.35401.23	chr9	+	5626	10	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	85	junction_2	22.209996637039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494472	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.24	chr9	+	5361	11	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	72	junction_6	24.3641129532762	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494472	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.25	chr9	+	3332	13	FSM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	-27	4	1	1	multi-exon	FALSE	canonical	1	4	junction_1	37.6787406902088	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGTGCCTCCTGCCTG	NA	False	NA	23	True	AATAAA	-13	NA	65494475	65503245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65494534_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.26	chr9	+	3719	12	NNC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	1	0	intron_retention	FALSE	canonical	1	6	junction_9	38.6193545447687	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494475	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500712_65500885_65501668_65501861_65502062
ES.35401.27	chr9	+	3570	11	NNC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_7	48.6260218401629	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494479	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499122_65500568_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.28	chr9	+	3831	11	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-5	0	intron_retention	FALSE	canonical	3	7	junction_5	38.7299625613039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65494481	65503249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.29	chr9	+	2727	4	NNC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	-4	277	intron_retention	FALSE	canonical	0	0	junction_1	53.160135440008	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65494482	65498051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496290_65496887_65496994_65497110_65497229
ES.35401.3	chr9	+	177	1	Intergenic	novelGene_28794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	65490976	65491153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65491000_65491200
ES.35401.30	chr9	+	3540	11	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-4	0	intron_retention	FALSE	canonical	1	5	junction_9	38.3765553430737	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494482	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65501668_65501861_65502062
ES.35401.31	chr9	+	3306	3	NIC	ENSMUSG00000041064.15	novel	2450	4	NA	NA	-4	744	intron_retention	FALSE	canonical	3	99	junction_1	4.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494482	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65497110_65497229
ES.35401.32	chr9	+	4297	11	NIC	ENSMUSG00000041064.15	novel	3685	12	NA	NA	-4	1	intron_retention	FALSE	canonical	3	64	junction_5	27.7805687486776	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494482	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.33	chr9	+	3934	10	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	7	junction_4	40.6514847192147	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494483	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.34	chr9	+	3578	11	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	41.2087369376932	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494483	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.35	chr9	+	4034	1	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-2	744	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494484	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494500_65498500
ES.35401.36	chr9	+	3244	12	NIC	ENSMUSG00000041064.15	novel	3685	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	46.1191414340247	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494486	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.37	chr9	+	3565	11	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	1	-1	intron_retention	FALSE	canonical	1	5	junction_9	45.5048349079524	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAACTGTGCCTCCTGCC	NA	False	NA	21	True	AATAAA	-11	NA	65494487	65503243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65501668_65501861_65502062
ES.35401.39	chr9	+	3223	12	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_7	45.1806292142811	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTAACTGTGCCTCCTGC	NA	False	NA	20	True	AATAAA	-10	NA	65494488	65503242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.4	chr9	+	371	1	Intergenic	novelGene_28795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAAAAACAAACAACT	NA	False	NA	NA	False	NA	NA	NA	65490976	65491347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65491000_65491300
ES.35401.40	chr9	+	3401	13	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	43.0021801772887	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494488	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.41	chr9	+	2693	7	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	2	717	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	33.6501609703926	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65494488	65498491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229
ES.35401.42	chr9	+	3901	10	FSM	ENSMUSG00000041064.15	ENSMUST00000152529.2	3897	10	-6	2	2	1	multi-exon	FALSE	canonical	3	7	junction_4	40.6806290542183	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494488	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65495677_65496286_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.43	chr9	+	3567	12	NIC	ENSMUSG00000041064.15	novel	3680	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	13	junction_1	31.7950565313967	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494488	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668
ES.35401.44	chr9	+	3671	12	NNC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_6	38.7074212885581	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494488	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497328_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.45	chr9	+	3330	6	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	2	744	intron_retention	FALSE	canonical	3	14	junction_1	36.2182274552469	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65494488	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494865_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229
ES.35401.46	chr9	+	3386	13	NNC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	43.368255159224	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494493	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500712_65500885_65501668_65501861_65502062
ES.35401.47	chr9	+	3699	10	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	478	1	intron_retention	FALSE	canonical	2	4	junction_1	51.1760457081337	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGTGCCTCCTGCCTG	NA	False	NA	23	True	AATAAA	-13	NA	65494985	65503245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.48	chr9	+	4211	8	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	775	0	intron_retention	FALSE	canonical	3	64	junction_4	31.3551089480304	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65495282	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65500885_65501668_65501861_65502062
ES.35401.49	chr9	+	2771	11	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	802	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	41.4796335567227	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65495309	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500738_65500885_65501668_65501861_65502062
ES.35401.5	chr9	+	3744	12	FSM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	-59	0	-14	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65494427	65503249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.50	chr9	+	3588	10	NIC	ENSMUSG00000041064.15	novel	3680	12	NA	NA	962	0	intron_retention	FALSE	canonical	3	64	junction_6	26.9732377655252	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65495469	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65501861_65502062
ES.35401.51	chr9	+	2671	12	NNC	ENSMUSG00000041064.15	novel	3685	12	NA	NA	983	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.0668862266688	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGTGCCTCCTGCCTG	NA	False	NA	23	True	AATAAA	-13	NA	65495490	65503245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496502_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.52	chr9	+	2734	11	ISM	ENSMUSG00000041064.15	ENSMUST00000154970.9	3725	12	1603	-2	1570	0	3prime_fragment	FALSE	canonical	3	7	junction_5	39.1643970973638	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65496077	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.53	chr9	+	2213	3	ISM	ENSMUSG00000041064.15	ENSMUST00000152885.8	2450	4	1591	-744	1570	744	3prime_fragment	FALSE	canonical	3	108	junction_2	4.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTGCACACACACACA	NA	False	NA	NA	False	NA	NA	NA	65496077	65498518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65496887_65496994_65497110_65497229
ES.35401.54	chr9	+	3605	9	NIC	ENSMUSG00000041064.15	novel	3725	12	NA	NA	1591	1	intron_retention	FALSE	canonical	3	7	junction_5	41.155004252217	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65496098	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65498968_65499142_65499405_65499513_65500543_65501861_65502062
ES.35401.55	chr9	+	4344	10	NIC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	1592	0	intron_retention	FALSE	canonical	3	72	junction_5	25.4548741360854	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65496099	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.56	chr9	+	1742	3	NNC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	6612	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	79.5	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65501119	65503244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65501488_65501668_65501861_65502062
ES.35401.57	chr9	+	188	1	Intergenic	novelGene_28796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATACTCT	NA	False	NA	NA	False	NA	NA	NA	65501358	65501546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65501400_65501500
ES.35401.58	chr9	+	177	1	Intergenic	novelGene_28797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGCATGATG	NA	False	NA	NA	False	NA	NA	NA	65503571	65503748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65503600_65503700
ES.35401.59	chr9	+	179	2	Intergenic	novelGene_28798	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	65503572	65528045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65503718_65528011
ES.35401.6	chr9	+	3453	13	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	35.6872020322256	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65494433	65503249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494865_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.60	chr9	+	2429	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-13170	4	intron_retention	FALSE	canonical	0	0	junction_1	578.219610846387	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTTGCTTCTACGAT	NA	False	NA	20	True	AATAAA	-20	NA	65523759	65567814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65523880_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65566416_65566487_65566719
ES.35401.61	chr9	+	181	1	Intergenic	novelGene_28803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	65527865	65528046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65527900_65528000
ES.35401.62	chr9	+	1806	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-430	-284	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	534.726273433427	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGTTTAATGTTTAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	65536499	65567524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65536750_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.63	chr9	+	2024	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-355	7	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	534.726273433427	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCTTCTACGATCCA	NA	False	NA	23	True	AATAAA	-23	NA	65536574	65567817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65536750_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.64	chr9	+	2034	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-142	-2	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	532.456438945948	793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65536787	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65536984_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.65	chr9	+	1965	9	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	-47	1	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	514.959813359256	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATTTTTGCTTCTAC	NA	False	NA	17	True	AATAAA	-17	NA	65536882	65567811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.66	chr9	+	1714	8	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	7	-2	combination_of_known_splicesites	FALSE	canonical	2	51	junction_1	555.851139960978	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65536936	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65537005_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.67	chr9	+	1418	4	NIC	ENSMUSG00000032387.16	novel	1803	9	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_2	759.119811945973	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65536937	65567808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65537005_65537987_65538180_65566416_65566487_65566719
ES.35401.68	chr9	+	1870	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	136	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	549.976348923297	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTTTTGCTTCTACGAT	NA	False	NA	20	True	AATAAA	-20	NA	65537065	65567814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65537090_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.69	chr9	+	111	1	Intergenic	novelGene_28807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65537068	65537179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65537100_65537200
ES.35401.7	chr9	+	3505	10	NNC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-7	0	intron_retention	FALSE	canonical	2	2	junction_2	43.1611965646098	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494434	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496943_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.70	chr9	+	2057	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	282	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	548.353216458151	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65537211	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65537431_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.71	chr9	+	2625	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	-629	-9	282	7	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCTTCTACGATCCA	NA	False	NA	23	True	AATAAA	-23	NA	65537211	65567817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.72	chr9	+	3021	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	345	3	intron_retention	FALSE	canonical	3	1453	junction_4	118.273341600436	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTGCTTCTACGA	NA	False	NA	19	True	AATAAA	-19	NA	65537274	65567813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65566416_65566487_65566719
ES.35401.73	chr9	+	1951	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-230	-286	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	704.022183155474	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAAGTTTAATGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	65537610	65567522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558631_65558724_65558900_65558987_65566416_65566487_65566719
ES.35401.74	chr9	+	2311	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-200	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	707.635985164689	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGCTCTGATTTTT	NA	False	NA	9	True	AATAAA	-9	NA	65537640	65567803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558539_65558669_65558828_65558987_65566416_65566487_65566719
ES.35401.75	chr9	+	3075	6	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-73	-4	intron_retention	FALSE	canonical	3	1453	junction_3	104.080737891312	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCTCTGATTTTTG	NA	False	NA	10	True	AATAAA	-10	NA	65537767	65567804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65556630_65556709_65557248_65557907_65558214_65558987_65566416_65566487_65566719
ES.35401.76	chr9	+	1497	3	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	814.5	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537841	65567808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65566416_65566487_65566719
ES.35401.77	chr9	+	2481	7	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_3	778.950023357653	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTCTGATTTTTGC	NA	False	NA	11	True	AATAAA	-11	NA	65537842	65567805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557303_65557379_65557843_65557907_65558214_65558987_65566416_65566487_65566719
ES.35401.78	chr9	+	2980	10	Fusion	ENSMUSG00000032387.16_ENSMUSG00000040652.17	novel	1987	8	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_5	696.713838558921	948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTCTGTCTTTTTATT	NA	False	NA	22	True	AATAAA	-16	NA	65537846	65597581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65582445_65582516_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.79	chr9	+	1912	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	564.138751205982	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTTTTGCTTCTACG	NA	False	NA	18	True	AATAAA	-18	NA	65537847	65567812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558900_65558987_65566416_65566487_65566719
ES.35401.8	chr9	+	3422	13	NIC	ENSMUSG00000041064.15	novel	3309	13	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	35.8817502360183	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGCCTCCTGCCTGGT	NA	False	NA	25	True	AATAAA	-15	NA	65494434	65503247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65494581_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.80	chr9	+	1864	8	ISM	ENSMUSG00000032387.16	ENSMUST00000169003.8	1803	9	918	4	7	-2	3prime_fragment	FALSE	canonical	3	8	junction_5	575.471093619685	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65537847	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558942_65558987_65566416_65566487_65566719
ES.35401.81	chr9	+	1180	6	Fusion	ENSMUSG00000032387.16_ENSMUSG00000040652.17	novel	1987	8	NA	NA	11	-61	intron_retention	FALSE	canonical	3	13	junction_1	175.270077309277	945	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCATTAGAAGCTTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	65537851	65596738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65538180_65582445_65582516_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.82	chr9	+	2267	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	575.1275634898	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATTTTTGCTTCTAC	NA	False	NA	17	True	AATAAA	-17	NA	65537852	65567811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558539_65558987_65566416_65566487_65566719
ES.35401.83	chr9	+	1944	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	13	7	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_5	561.049635841207	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGCTTCTACGATCCA	NA	False	NA	23	True	AATAAA	-23	NA	65537853	65567817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558867_65558987_65566416_65566487_65566719
ES.35401.84	chr9	+	1658	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	13	316	13	-316	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTATTAAAGAGACCTT	NA	False	NA	NA	False	CATAAA	-22	NA	65537853	65567492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.85	chr9	+	2278	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	13	-4	intron_retention	FALSE	canonical	3	1465	junction_3	91.7526869119131	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCTCTGATTTTTG	NA	False	NA	10	True	AATAAA	-10	NA	65537853	65567804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.86	chr9	+	3298	5	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	13	-3	intron_retention	FALSE	canonical	3	1665	junction_3	30.2603288151335	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTCTGATTTTTGC	NA	False	NA	11	True	AATAAA	-11	NA	65537853	65567805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65556630_65556709_65557248_65558987_65566416_65566487_65566719
ES.35401.87	chr9	+	2019	6	Fusion	ENSMUSG00000032387.16_ENSMUSG00000040652.17	novel	1987	8	NA	NA	14	-2	intron_retention	FALSE	canonical	3	13	junction_1	175.270077309277	948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTCTGTCTTTTTAT	NA	False	NA	21	True	AATAAA	-15	NA	65537854	65597580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65538180_65582445_65582516_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.88	chr9	+	1428	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	577.347735912479	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTCTGATTTTTGC	NA	False	NA	11	True	AATAAA	-11	NA	65537854	65567805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65567261
ES.35401.89	chr9	+	1945	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	571.165725262192	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65537854	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557869_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.9	chr9	+	3518	10	NNC	ENSMUSG00000041064.15	novel	3395	13	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	52.550504807809	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTGCCTCCTGCCTGG	NA	False	NA	24	True	AATAAA	-14	NA	65494435	65503246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65495677_65496286_65496420_65496994_65497110_65497229_65497337_65498936_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ES.35401.90	chr9	+	2155	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	706.777325258812	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537856	65567808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558539_65558724_65558828_65558987_65566416_65566487_65566719
ES.35401.91	chr9	+	1502	5	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	19	-286	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	723.819901632996	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATAAGTTTAATGTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	65537859	65567522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.92	chr9	+	2522	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	19	-2	intron_retention	FALSE	canonical	3	1453	junction_3	96.0619013391307	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65537859	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65538180_65556630_65556709_65557248_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.93	chr9	+	2130	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	708.065851457334	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	False	NA	12	True	AATAAA	-12	NA	65537888	65567806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558539_65558733_65558828_65558987_65566416_65566487_65566719
ES.35401.94	chr9	+	2178	9	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	52	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	805.42535346238	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTTTTGCTTCTACG	NA	False	NA	18	True	AATAAA	-18	NA	65537892	65567812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558037_65558366_65558631_65558733_65558867_65558987_65566416_65566487_65566719
ES.35401.95	chr9	+	1910	5	Fusion	ENSMUSG00000032387.16_ENSMUSG00000040652.17	novel	865	2	NA	NA	52	-3	intron_retention	FALSE	canonical	0	0	junction_1	162.105675409592	948	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGGTCTGTCTTTTTA	NA	False	NA	20	True	AATAAA	-14	NA	65537892	65597579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65538180_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ES.35401.96	chr9	+	1966	8	NNC	ENSMUSG00000032387.16	novel	600	2	NA	NA	289	5	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_1	562.733742818149	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGCTTCTACGATC	NA	False	NA	21	True	AATAAA	-21	NA	65538656	65567815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65538968_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.97	chr9	+	4107	7	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	16341	-10	-12077	8	3prime_fragment	FALSE	canonical	3	1453	junction_3	109.502536753975	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTCTACGATCCAT	2886	False	NA	24	True	AATAAA	-24	NA	65554181	65567818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35401.98	chr9	+	3411	6	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	-10932	-4	intron_retention	FALSE	canonical	3	1453	junction_3	113.511232924323	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCTCTGATTTTTG	4031	False	NA	10	True	AATAAA	-10	NA	65555326	65567804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65566416_65566487_65566719
ES.35401.99	chr9	+	1558	6	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	19407	13	-9011	-13	3prime_fragment	FALSE	canonical	3	1453	junction_2	111.524705783069	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAAGTGACTCTGCTC	5952	False	NA	1	True	AATAAA	-1	NA	65557247	65567795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ES.35402.1	chr9	-	3336	6	NNC	ENSMUSG00000050721.10	novel	3273	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.52890339965728	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65487357	65461665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471314_65480261_65480412_65487219
ES.35402.2	chr9	-	3454	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	-181	0	-181	0	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65487503	65461665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
ES.35403.1	chr9	-	178	1	Intergenic	novelGene_28793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTCACTTC	NA	False	NA	NA	False	NA	NA	NA	65489563	65489385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65489400_65489600
ES.35404.1	chr9	-	1774	1	Antisense	novelGene_ENSMUSG00000041064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTACGCTGTCTGCTT	3963	False	NA	NA	False	NA	NA	NA	65495950	65494176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65494200_65496000
ES.35405.1	chr9	-	3377	2	Antisense	novelGene_ENSMUSG00000041064.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAATTGGGGATCCCTT	9584	False	NA	NA	False	NA	NA	NA	65503128	65499550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65501858_65502058
ES.35405.2	chr9	-	3574	1	Antisense	novelGene_ENSMUSG00000041064.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAAAATTGGGGATC	9584	False	NA	NA	False	NA	NA	NA	65503128	65499554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65499600_65503100
ES.35406.1	chr9	-	181	1	Intergenic	novelGene_28799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGTTTAAGTTTTC	7076	False	NA	NA	False	NA	NA	NA	65505636	65505455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65505500_65505600
ES.35407.1	chr9	-	183	1	Intergenic	novelGene_28800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGATTTACTCTC	1222	False	NA	NA	False	NA	NA	NA	65511490	65511307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65511300_65511500
ES.35408.1	chr9	-	205	1	Intergenic	novelGene_28801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACCTTCTCCAGAACT	6684	False	NA	NA	False	NA	NA	NA	65523120	65522915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65522900_65523100
ES.35409.1	chr9	-	2167	1	Intergenic	novelGene_28802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAAAAAGATTAATT	8193	False	NA	NA	False	AATAAA	-11	NA	65527962	65525795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65525800_65528000
ES.3541.1	chr10	+	206	1	Intergenic	novelGene_2710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGTAGAAAAAGCAATAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	88623634	88623840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_88623600_88623800
ES.35410.1	chr9	-	183	1	Intergenic	novelGene_28804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTGAAGTAATAGTA	3965	False	NA	NA	False	NA	NA	NA	65532190	65532007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65532000_65532200
ES.35411.1	chr9	-	2742	1	Intergenic	novelGene_28805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6685	False	NA	NA	False	NA	NA	NA	65535671	65532929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65532900_65535700
ES.35411.2	chr9	-	2674	1	Intergenic	novelGene_28806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5513	False	NA	NA	False	NA	NA	NA	65536843	65534169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65534200_65536800
ES.35412.1	chr9	-	1991	7	Antisense	novelGene_ENSMUSG00000032387.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGGCCTCAGCTGGGGCC	9650	False	NA	NA	False	NA	NA	NA	65567128	65537798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65538178_65556628_65556707_65557246_65557285_65557840_65557907_65558035_65558985_65566414_65566487_65566719
ES.35412.2	chr9	-	1694	2	Antisense	novelGene_ENSMUSG00000032387.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGATGCCCACAT	9637	False	NA	NA	False	NA	NA	NA	65545900	65542304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65543175_65545076
ES.35412.3	chr9	-	3598	1	Intergenic	novelGene_28808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGATGCCCACAT	9635	False	NA	NA	False	NA	NA	NA	65545902	65542304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65542300_65545900
ES.35413.1	chr9	-	158	1	Intergenic	novelGene_28809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6009	False	NA	NA	False	NA	NA	NA	65574074	65573916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65573900_65574100
ES.35414.1	chr9	+	3142	1	Antisense	novelGene_ENSMUSG00000040524.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACCAAACCAAACAAA	4847	False	NA	NA	False	NA	NA	NA	65635926	65639068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_65635900_65639100
ES.35415.1	chr9	+	2447	1	Intergenic	novelGene_28813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	65676284	65678731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65676300_65678700
ES.35416.1	chr9	+	1383	1	Intergenic	novelGene_28816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAAGACAGAATCA	NA	False	NA	NA	False	NA	NA	NA	65712475	65713858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65712500_65713900
ES.35416.2	chr9	+	593	1	Intergenic	novelGene_28815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	AATGAA	-23	NA	65712475	65713068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65712500_65713100
ES.35417.1	chr9	+	194	1	Intergenic	novelGene_28817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	65716099	65716293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65716100_65716300
ES.35418.1	chr9	+	277	1	Intergenic	novelGene_28818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAAAAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	65716773	65717050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65716800_65717000
ES.35418.2	chr9	+	183	2	Intergenic	novelGene_28819	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	65716773	65766311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65716941_65766295
ES.35418.3	chr9	+	157	1	Intergenic	novelGene_28820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	65716775	65716932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65716800_65716900
ES.35418.4	chr9	+	1202	1	Intergenic	novelGene_28821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACCAACCAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	65724063	65725265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65724100_65725300
ES.35418.5	chr9	+	211	1	Intergenic	novelGene_28822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATGGTAATAAC	NA	False	NA	NA	False	NA	NA	NA	65730216	65730427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65730200_65730400
ES.35419.1	chr9	+	176	1	Intergenic	novelGene_28825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65772759	65772935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65772800_65772900
ES.3542.1	chr10	+	6769	2	Antisense	novelGene_ENSMUSG00000004356.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88641254	88648550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_88645047_88645573
ES.3542.2	chr10	+	3097	2	Antisense	novelGene_ENSMUSG00000004356.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACAAACACTCTTT	NA	False	NA	NA	False	NA	NA	NA	88645361	88648584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_88645668_88645793
ES.35420.1	chr9	+	218	1	Intergenic	novelGene_28826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACCCAACCAGGACACA	NA	False	NA	NA	False	NA	NA	NA	65781841	65782059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65781800_65782100
ES.35421.1	chr9	+	996	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	47	1145	-36	-1145	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAATCTCTTGTCATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	65797565	65809403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.10	chr9	+	7229	14	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	7.4269619168008	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816261	65952296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.11	chr9	+	7271	15	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	5.25327885948483	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTACTTCCTTGTTTC	NA	False	NA	19	True	AATAAA	-20	NA	65816261	65952289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.12	chr9	+	7213	14	FSM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	-6	1	3	-1	multi-exon	FALSE	canonical	3	5	junction_1	6.58040843321514	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816261	65952296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65816451_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.13	chr9	+	2024	11	NIC	ENSMUSG00000032384.17	novel	4001	12	NA	NA	3	288	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	8.29457654133109	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAAAGAACAGACTCT	NA	False	NA	NA	False	NA	NA	NA	65816261	65920587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028
ES.35421.14	chr9	+	7165	13	FSM	ENSMUSG00000032384.17	ENSMUST00000206594.2	2482	13	-108	-4575	3	0	multi-exon	FALSE	canonical	2	3	junction_1	7.24377127070024	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816261	65952297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.15	chr9	+	2648	14	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	7.4269619168008	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTCTGGTTATATT	NA	False	NA	NA	False	TATAAA	-16	NA	65816266	65947720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.16	chr9	+	7161	14	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	7.38541662319905	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816267	65952296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65946858
ES.35421.17	chr9	+	7165	13	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	8.36784520251978	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816268	65952296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65857297_65857347_65865610_65866004_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.18	chr9	+	7098	13	NIC	ENSMUSG00000032384.17	novel	2482	13	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	9.21464715668604	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTACTTTTACTTCCT	NA	False	NA	13	True	AATAAA	-14	NA	65816268	65952283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65946858
ES.35421.19	chr9	+	1740	11	NIC	ENSMUSG00000032384.17	novel	4001	12	NA	NA	1	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	10.0722390757964	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGACTTGTTTTCCAA	NA	False	NA	NA	False	AATAAA	-9	NA	65816268	65938145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65937906
ES.35421.2	chr9	+	5734	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	58	-3604	-25	3604	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	65797576	65814152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.20	chr9	+	7272	15	NNC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.35263384711873	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTCCTTGTTTCA	NA	False	NA	20	True	AATAAA	-21	NA	65816272	65952290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65816451_65828285_65828362_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.21	chr9	+	7283	15	NNC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1307775151379	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTACTTTTACTTC	NA	False	NA	11	True	AATAAA	-12	NA	65816272	65952281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65816451_65826601_65826682_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.22	chr9	+	4382	4	ISM	ENSMUSG00000032384.17	ENSMUST00000146069.8	3087	8	28	41739	-12	3763	5prime_fragment	FALSE	canonical	3	13	junction_2	2.86744175568088	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGCTTAGAGCACTGG	NA	False	NA	NA	False	AATAAA	-22	NA	65816283	65869711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610
ES.35421.23	chr9	+	1455	8	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	2	633	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.7084289452161	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTGGGGGGGG	NA	False	NA	NA	False	AGTAAA	-2	NA	65816297	65915711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021
ES.35421.24	chr9	+	7270	15	NNC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.56428273561249	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTTTCATTAGCT	NA	False	NA	26	True	AATAAA	-27	NA	65816322	65952296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65816451_65844078_65844197_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.25	chr9	+	6721	11	NIC	ENSMUSG00000032384.17	novel	2482	13	NA	NA	56	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	9.14822387133153	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCCTTGTTTCATTAG	NA	False	NA	24	True	AATAAA	-25	NA	65816425	65952294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816451_65828285_65828351_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65927083_65927195_65939520_65939628_65946858
ES.35421.26	chr9	+	7198	13	NIC	ENSMUSG00000032384.17	novel	5173	13	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.87885708011567	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTACTTTTACTTCC	NA	False	NA	12	True	AATAAA	-13	NA	65816707	65952282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65816945_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ES.35421.27	chr9	+	5865	1	NIC	ENSMUSG00000032384.17	novel	3087	8	NA	NA	-8958	-3405	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGCTGTGATGGCAC	NA	False	NA	NA	False	NA	NA	NA	65856678	65862543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65856700_65862500
ES.35421.28	chr9	+	1650	1	Intergenic	novelGene_28831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCTTAGATTTACCTT	3050	False	NA	NA	False	NA	NA	NA	65893581	65895231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65893600_65895200
ES.35421.29	chr9	+	4765	1	Intergenic	novelGene_28833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAACAGCTGAGAGTGC	5433	False	NA	NA	False	NA	NA	NA	65929644	65934409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65929600_65934400
ES.35421.3	chr9	+	4013	20	Fusion	ENSMUSG00000040204.7_ENSMUSG00000032384.17	novel	1740	11	NA	NA	-22	-2	multi-exon	FALSE	canonical	0	0	junction_4	302.30017552407	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTACTTCCTTGTTTC	NA	False	NA	19	True	AATAAA	-20	NA	65797579	65952289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839_65808934_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858_65948445_65950007_65950050_65952067
ES.35421.30	chr9	+	3366	2	ISM	ENSMUSG00000032384.17	ENSMUST00000206594.2	2482	13	120249	507	-6681	186	3prime_fragment	FALSE	canonical	3	21	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGACTACTATTCTCT	NA	False	NA	NA	False	NA	NA	NA	65936618	65947215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65939628_65946858
ES.35421.31	chr9	+	5542	2	ISM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	123250	7	-3782	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTCCTTGTTTCA	NA	False	NA	20	True	AATAAA	-21	NA	65939517	65952290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_65939628_65946858
ES.35421.32	chr9	+	3064	1	NIC	ENSMUSG00000032384.17	novel	2073	13	NA	NA	5617	-307	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACACAGCTGTG	NA	False	NA	NA	False	TTTAAA	-36	NA	65948916	65951980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65948900_65952000
ES.35421.4	chr9	+	713	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	63	1412	-20	-1412	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTACTTGCTACTCTACG	NA	False	NA	20	True	NA	NA	NA	65797581	65809136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.5	chr9	+	2398	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	75	-285	-8	285	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGGCCTGCATGTAT	NA	False	NA	16	True	AATAAA	-26	NA	65797593	65810833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.6	chr9	+	1976	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	125	87	0	-87	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGGTTTGACAGACTAT	NA	False	NA	NA	False	AATAAA	-20	NA	65797643	65810461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.7	chr9	+	1067	5	NNC	ENSMUSG00000040204.7	novel	2188	4	NA	NA	0	3604	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	367.570656473011	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	65797643	65814152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839_65809309_65813908
ES.35421.8	chr9	+	519	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	128	1541	3	-1541	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACCAGATGTAAGA	NA	False	NA	NA	False	NA	NA	NA	65797646	65809007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ES.35421.9	chr9	+	182	1	Antisense	novelGene_ENSMUSG00000032386.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGAGTGGGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	65802496	65802678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_65802500_65802700
ES.35422.1	chr9	-	3885	1	Genic_Genomic	ENSMUSG00000040524.10	novel	NA	NA	NA	NA	5685	816	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTAAAGTTTGCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	65602741	65598856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_65598900_65602700
ES.35422.10	chr9	-	351	1	Intergenic	novelGene_28811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTTAGCAGTTAC	NA	False	NA	NA	False	GATAAA	-12	NA	65665090	65664739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65664700_65665100
ES.35422.11	chr9	-	178	1	Intergenic	novelGene_28812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTACATGGGAC	NA	False	NA	NA	False	NA	NA	NA	65665090	65664912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65664900_65665100
ES.35422.12	chr9	-	180	1	Intergenic	novelGene_28814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAATTCAGTTA	1933	False	NA	NA	False	NA	NA	NA	65689462	65689282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65689300_65689500
ES.35422.2	chr9	-	7910	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-133	0	-133	0	multi-exon	FALSE	canonical	2	5	junction_1	3.80058475033046	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGGCTGCTGGTTA	NA	False	NA	0	True	AATAAA	-24	NA	65734979	65599672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ES.35422.3	chr9	-	7244	11	NNC	ENSMUSG00000040524.10	novel	7777	10	NA	NA	-141	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.02493781056044	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGAGGGCTGCTGG	NA	False	NA	-3	True	AATAAA	-21	NA	65734987	65599675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65600179_65600849_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ES.35422.4	chr9	-	7654	9	NNC	ENSMUSG00000040524.10	novel	7777	10	NA	NA	2425	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.11737237261468	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAATCTGTGAGGGCTG	NA	False	NA	-7	True	AATAAA	-17	NA	65702769	65599679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65602977_65603433_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903
ES.35422.5	chr9	-	4890	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-110	2997	-110	-2997	multi-exon	FALSE	canonical	2	5	junction_1	3.80058475033046	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGACTGCTCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	65734956	65602669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ES.35422.6	chr9	-	4763	10	NNC	ENSMUSG00000040524.10	novel	7777	10	NA	NA	-115	-3064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.15201027527539	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTGGTCATCTAT	NA	False	NA	NA	False	NA	NA	NA	65734961	65602736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734812
ES.35422.7	chr9	-	3898	5	ISM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	-166	9783	-166	-2304	5prime_fragment	FALSE	canonical	3	14	junction_2	1.29903810567666	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGCAGAAGAGTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	65735012	65609455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ES.35422.8	chr9	-	3589	4	NNC	ENSMUSG00000040524.10	novel	597	2	NA	NA	-121	-19283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.40870359029762	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTCACCTGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	65734967	65626434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65628704_65638257_65638484_65701903_65702778_65734747
ES.35422.9	chr9	-	1531	1	Intergenic	novelGene_28810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	65634949	65633418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65633400_65634900
ES.35423.1	chr9	-	3643	1	ISM	ENSMUSG00000032386.16	ENSMUST00000179395.8	7055	15	76222	0	20641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGAATTACTTTTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	65739854	65736211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_65736200_65739900
ES.35423.10	chr9	-	4110	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	-90	-2021	-90	1	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGACTCAGTTTCCTTT	NA	False	NA	NA	False	AGTAAA	-31	NA	65792428	65738416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.11	chr9	-	3621	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	4	-1626	3	229	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCTTTTCATGGTTAG	NA	False	NA	NA	False	AATAAA	-20	NA	65792334	65738811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.12	chr9	-	3216	14	NNC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	21	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1754131762281	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGGAAGTTCTCTGTT	NA	False	NA	-8	True	AATAAA	-31	NA	65792316	65739037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65739528_65739688_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.13	chr9	-	3483	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	-84	-1400	-84	3	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGGAAGTTCTCTGTT	NA	False	NA	-8	True	AATAAA	-31	NA	65792422	65739037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.15	chr9	-	3292	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	0	623	0	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792337	65739040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.16	chr9	-	3989	12	NNC	ENSMUSG00000032386.16	novel	4211	16	NA	NA	5905	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.7105755205514	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65786432	65739040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65761816_65762767_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356
ES.35423.17	chr9	-	3369	13	NNC	ENSMUSG00000032386.16	novel	4211	16	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	59.7863673609814	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792320	65739040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786482_65788172_65788343_65792209
ES.35423.18	chr9	-	3172	12	NIC	ENSMUSG00000032386.16	novel	4211	16	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	60.6986867939694	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792327	65739040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65786356_65786491_65788172_65788343_65792209
ES.35423.19	chr9	-	3342	13	NNC	ENSMUSG00000032386.16	novel	4211	16	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.6789442675462	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792317	65739040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760200_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.2	chr9	-	5397	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	12	-3410	11	-816	multi-exon	TRUE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATTAAAATTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	65792326	65737027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.20	chr9	-	4745	14	NNC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	14	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	74.6149088010206	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGGTTGGAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	65792323	65739044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65772748_65772958_65773281_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.21	chr9	-	3129	11	NIC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	80.3597536083828	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGGGTTGGAAGTT	NA	False	NA	-15	True	AATAAA	-24	NA	65792327	65739044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65740731_65746216_65746320_65758648_65758741_65764605_65764794_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.23	chr9	-	3886	16	FSM	ENSMUSG00000032386.16	ENSMUST00000119245.8	4211	16	-110	435	0	-435	multi-exon	FALSE	canonical	0	0	junction_13	81.2253381375267	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATTAATTTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	65816068	65739475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209_65792530_65803978_65804213_65805658_65805811_65815720
ES.35423.24	chr9	-	2678	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	19	-698	18	698	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGGTTGGTTTGAA	NA	False	NA	NA	False	TATAAA	-24	NA	65792319	65739739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.25	chr9	-	2151	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	22	-174	21	174	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGATGTCTGAGGAATC	NA	False	NA	NA	False	AATAGA	-10	NA	65792316	65740263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.26	chr9	-	2053	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	-7	-47	-7	47	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATTGGAAATTATTTT	NA	False	NA	39	True	ACTAAA	-16	NA	65792345	65740390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.27	chr9	-	1896	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	15	88	14	-88	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCTGTGTATTTTTCTT	NA	False	NA	-96	True	NA	NA	NA	65792323	65740525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.28	chr9	-	1771	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	23	205	22	-205	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATAGTGGAGTCTTGT	NA	False	NA	NA	False	AATAAA	-30	NA	65792315	65740642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.29	chr9	-	4144	6	NIC	ENSMUSG00000032386.16	novel	3915	12	NA	NA	17	-9117	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	101.899950932275	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTCCAAGGTCATTG	NA	False	NA	NA	False	AAGAAA	-13	NA	65792320	65755408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65758741_65764605_65764794_65765527_65765655_65771485_65771702_65788172_65788343_65792209
ES.35423.30	chr9	-	1595	8	ISM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	12	24681	11	-18827	5prime_fragment	FALSE	canonical	3	185	junction_2	15.7480157480236	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGGTGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	65792326	65765118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.31	chr9	-	174	1	Intergenic	novelGene_28823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAATTAA	4459	False	NA	NA	False	NA	NA	NA	65766989	65766815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65766800_65767000
ES.35423.32	chr9	-	1882	1	Intergenic	novelGene_28824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	287	False	NA	NA	False	NA	NA	NA	65771161	65769279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65769300_65771200
ES.35423.33	chr9	-	1180	8	NNC	ENSMUSG00000032386.16	novel	661	3	NA	NA	11	15543	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1754147122089	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGCACACCGATGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	65792326	65772732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65772740_65772950_65773281_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.34	chr9	-	3781	1	NIC	ENSMUSG00000032386.16	novel	7055	15	NA	NA	10	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAATGCTTTTCATTTG	NA	False	NA	NA	False	AAAAAG	-4	NA	65792327	65788546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65788500_65792300
ES.35423.35	chr9	-	2803	1	NIC	ENSMUSG00000032386.16	novel	7055	15	NA	NA	17	-1242	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACATTTATAATGTT	NA	False	NA	NA	False	NA	NA	NA	65792320	65789517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65789500_65792300
ES.35423.36	chr9	-	174	1	Intergenic	novelGene_28827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	65803388	65803214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65803200_65803400
ES.35423.4	chr9	-	5294	12	NIC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	-49	-853	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	61.3430942047397	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65792387	65737064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.5	chr9	-	4845	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	11	-2857	10	837	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAATGTGGCTTCATTC	NA	False	NA	NA	False	GATAAA	-19	NA	65792327	65737580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.6	chr9	-	4337	13	NNC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	8	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.9048549106396	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTAGTGTAAACCTAT	NA	False	NA	NA	False	AATAAA	-34	NA	65792329	65738114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788367_65792209
ES.35423.7	chr9	-	4278	13	NNC	ENSMUSG00000032386.16	novel	1999	13	NA	NA	17	284	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.4618796341041	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTCTTTTTAAACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	65792320	65738133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65740731_65746216_65746313_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.8	chr9	-	4240	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	-61	-264	-60	264	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTAAGTGTCCT	NA	False	NA	NA	False	AATACA	-11	NA	65792398	65738153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35423.9	chr9	-	4267	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	16	-2284	15	264	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAACTAAGTGTCCT	NA	False	NA	NA	False	AATACA	-11	NA	65792322	65738153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ES.35424.1	chr9	-	1040	1	Intergenic	novelGene_28828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	65832910	65831870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65831900_65832900
ES.35425.1	chr9	-	4295	1	Intergenic	novelGene_28829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65839803	65835508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65835500_65839800
ES.35425.2	chr9	-	2896	1	Intergenic	novelGene_28830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	65842157	65839261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65839300_65842200
ES.35426.1	chr9	-	253	1	Intergenic	novelGene_28832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTTATTCAATGTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	65896989	65896736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65896700_65897000
ES.35427.1	chr9	-	1541	1	Intergenic	novelGene_28834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-31	NA	65941330	65939789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65939800_65941300
ES.35428.1	chr9	-	2426	1	Antisense	novelGene_ENSMUSG00000032384.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCCAATATAACCAGACA	NA	False	NA	NA	False	NA	NA	NA	65950172	65947746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_65947700_65950200
ES.35429.1	chr9	+	206	1	Intergenic	novelGene_28835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTCCCGGGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	65954089	65954295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_65954100_65954300
ES.3543.1	chr10	-	8860	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-39	0	-39	0	multi-exon	FALSE	canonical	3	123	junction_48	34.745281900583	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662705	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.10	chr10	-	8833	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.3748442127756	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGCCTGAAAGACTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	88662692	88582469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592884_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613397_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.11	chr10	-	9512	61	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	123	junction_47	35.0056503375606	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGCCTGAAAGACTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	88662685	88582469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.13	chr10	-	8767	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	40.8569584133817	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGCCTGAAAGACTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	88662685	88582469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608359_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.14	chr10	-	8740	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_50	40.6617922514454	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGCCTGAAAGACTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	88662696	88582469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649888_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.18	chr10	-	6144	42	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_38	44.4771194912524	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTGCCTGAAAGACTAT	NA	False	NA	-2	True	ATTAAA	-15	NA	88662685	88582469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88657704_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.2	chr10	-	8924	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_58	41.0407208588079	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662685	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657517_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.23	chr10	-	4272	1	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-3049	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	NA	False	NA	-3	True	ATTAAA	-14	NA	88586742	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582500_88586700
ES.3543.24	chr10	-	8779	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	46.3098418397514	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	NA	False	NA	-3	True	ATTAAA	-14	NA	88662685	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597739_88598630_88598835_88600623_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.27	chr10	-	8506	60	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_41	41.1874659843084	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	NA	False	NA	-3	True	ATTAAA	-14	NA	88662674	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.28	chr10	-	4675	15	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	2711	-2	intron_retention	FALSE	canonical	3	182	junction_9	29.0242685224849	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	6393	False	NA	-3	True	ATTAAA	-14	NA	88598751	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630
ES.3543.3	chr10	-	9813	61	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	29	0	intron_retention	FALSE	canonical	3	123	junction_47	35.0129499852079	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662616	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.36	chr10	-	7620	23	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	4861	-2	intron_retention	FALSE	canonical	3	149	junction_13	25.6846740165968	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	NA	False	NA	-3	True	ATTAAA	-14	NA	88608831	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713
ES.3543.37	chr10	-	8816	62	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	199	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_61	41.0583384221873	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCTGCCTGAAAGACTA	NA	False	NA	-3	True	ATTAAA	-14	NA	88662446	88582470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662250
ES.3543.42	chr10	-	4676	4	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-5198	-3	intron_retention	FALSE	canonical	3	225	junction_3	13.1993265821489	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCTGCCTGAAAGACT	NA	False	NA	-4	True	ATTAAA	-13	NA	88588891	88582471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88584215_88585121_88586586_88587206
ES.3543.43	chr10	-	5683	38	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-8418	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.1408364269131	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCTGCCTGAAAGACT	NA	False	NA	-4	True	ATTAAA	-13	NA	88626946	88582471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582951_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912
ES.3543.45	chr10	-	8684	63	NNC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	40.7597080230827	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTCCTGCCTGAAAGAC	NA	False	NA	-5	True	ATTAAA	-12	NA	88662674	88582472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604584_88604724_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.48	chr10	-	7456	51	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-8	9925	-8	4338	5prime_fragment	FALSE	canonical	3	123	junction_37	23.8736758795121	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTGTAATCCTTCG	NA	False	NA	NA	False	NA	NA	NA	88662674	88592393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.5	chr10	-	8815	53	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	9529	0	intron_retention	TRUE	canonical	3	123	junction_47	36.498616939023	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88653116	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040
ES.3543.50	chr10	-	5780	43	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-9	20533	-9	-5397	5prime_fragment	FALSE	canonical	3	123	junction_29	20.6443263057136	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAAGATCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	88662675	88603001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.51	chr10	-	3518	27	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	17075	23694	17054	5878	internal_fragment	FALSE	canonical	3	123	junction_26	21.3969250680294	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATACTGTTTTTTCAT	NA	False	NA	NA	False	ATTAAA	-7	NA	88645591	88606162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576
ES.3543.52	chr10	-	4603	33	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	22	28376	1	1196	5prime_fragment	FALSE	canonical	3	123	junction_19	18.0828983002587	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGAGTCTGTCTGATT	NA	False	NA	NA	False	AATAAA	-15	NA	88662644	88610844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.53	chr10	-	2929	21	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-9	51460	-9	-21873	5prime_fragment	FALSE	canonical	3	123	junction_7	14.1665098030531	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGAGGGGCCATGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	88662675	88633928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.54	chr10	-	2551	16	ISM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	-28	60283	-28	18117	5prime_fragment	FALSE	canonical	3	123	junction_2	15.5343347316696	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTAGGAGTGTGTACAC	NA	False	NA	NA	False	AAAAAG	-36	NA	88662694	88642751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.8	chr10	-	8629	61	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	39.8659698935766	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662662	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.3543.9	chr10	-	8767	61	NIC	ENSMUSG00000004356.9	novel	8821	62	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_45	41.0831947259325	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662675	88582468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ES.35430.1	chr9	-	180	1	Intergenic	novelGene_28836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	65961211	65961031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_65961000_65961200
ES.35431.1	chr9	+	1030	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	-137	-1	-128	1	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	1437	False	NA	17	True	AATAAA	-17	NA	65967375	65973906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ES.35431.4	chr9	+	3367	3	NIC	ENSMUSG00000032383.8	novel	892	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	2090	junction_2	109.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTTGGGTGTGGGCTG	1570	False	NA	13	True	AATAAA	-13	NA	65967508	65973902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65970365_65972768_65972954_65973576
ES.35431.5	chr9	+	3298	4	FSM	ENSMUSG00000032383.8	ENSMUST00000213785.2	3305	4	7	0	-2	0	multi-exon	FALSE	canonical	3	2090	junction_3	185.159990878759	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1572	False	NA	16	True	AATAAA	-16	NA	65967510	65973905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_65967683_65968748_65968863_65970270_65972954_65973576
ES.35431.6	chr9	+	782	5	NNC	ENSMUSG00000032383.8	novel	892	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	962.582593858834	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1579	False	NA	16	True	AATAAA	-16	NA	65967517	65973905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65967578_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ES.35431.7	chr9	+	2296	4	NIC	ENSMUSG00000032383.8	novel	892	5	NA	NA	8	4	intron_retention	FALSE	canonical	3	2090	junction_3	182.499315067208	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGGGCTGTGTTTGG	1582	False	NA	20	True	AATAAA	-20	NA	65967520	65973909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65967683_65968748_65970365_65972768_65972954_65973576
ES.35431.8	chr9	+	4683	3	NIC	ENSMUSG00000032383.8	novel	3305	4	NA	NA	22	1	intron_retention	FALSE	canonical	3	2090	junction_2	223.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTGGGCTGTGTT	1596	False	NA	17	True	AATAAA	-17	NA	65967534	65973906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_65967683_65968748_65972954_65973576
ES.35431.9	chr9	+	1797	3	NNC	ENSMUSG00000032383.8	novel	3305	4	NA	NA	3637	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1045	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	5211	False	NA	16	True	AATAAA	-16	NA	65971149	65973905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_65972433_65972768_65972954_65973576
ES.35432.1	chr9	-	3190	5	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	-38	2	intron_retention	FALSE	canonical	0	0	junction_1	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTCATTGTGTGGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	65977039	65972455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65974863_65975061_65975504_65975967_65976073_65976455_65976540_65976887
ES.35432.2	chr9	-	3360	4	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	-11	0	intron_retention	FALSE	canonical	1	2	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTCATTGTGTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	65977012	65972457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65975504_65975967_65976073_65976455_65976540_65976887
ES.35432.3	chr9	-	2562	6	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	-52	0	intron_retention	TRUE	canonical	1	2	junction_3	1.85472369909914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTCATTGTGTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	65977053	65972457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65974502_65974794_65974863_65975408_65975504_65975967_65976073_65976455_65976540_65976887
ES.35432.4	chr9	-	2621	7	FSM	ENSMUSG00000039452.7	ENSMUST00000044711.7	2543	7	-81	3	-81	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.43241991988774	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACATTTGTCATTGTGT	NA	False	NA	NA	False	AATAAA	-9	NA	65977082	65972460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65974502_65974794_65974863_65975061_65975095_65975408_65975504_65975967_65976073_65976455_65976540_65976887
ES.35433.1	chr9	+	1328	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	-24	-64	-24	64	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCATAGCTGTGTTCTC	1359	False	NA	81	True	TATAAA	-31	NA	66033868	66046301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ES.35433.2	chr9	+	888	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	82	270	82	-270	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTGCCTGGCCTTCAG	1465	False	NA	NA	False	NA	NA	NA	66033974	66045967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ES.35433.3	chr9	+	1218	6	NNC	ENSMUSG00000032381.6	novel	1240	5	NA	NA	107	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	335.942614147119	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTAGGTTTTTACTG	1490	False	NA	22	True	AATAAA	-23	NA	66033999	66046242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66034253_66035006_66035087_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ES.35433.4	chr9	+	980	4	NIC	ENSMUSG00000032381.6	novel	1240	5	NA	NA	204	-6	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	323.837750870538	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAATGGCTCACCTTA	1587	False	NA	11	True	AATAAA	-12	NA	66034096	66046231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66034253_66039808_66039974_66043583_66043630_66045618
ES.35434.1	chr9	-	5075	2	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	31141	-10	-2398	10	intron_retention	FALSE	canonical	3	372	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTAGCACTTTTTGCTC	NA	False	NA	6	True	AATAAA	-30	NA	66001027	65995404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_65995852_65996399
ES.35434.10	chr9	-	1958	15	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.434959156083	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACAGGACTGGGCATG	NA	False	NA	-10	True	AATAAA	-14	NA	66032066	65995420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65995852_65996399_65996472_65996816_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.12	chr9	-	5543	12	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	26	-6	intron_retention	FALSE	canonical	2	266	junction_10	38.7786684140513	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACAGGACTGGGCATG	NA	False	NA	-10	True	AATAAA	-14	NA	66032053	65995420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.13	chr9	-	5440	14	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	25	-7	intron_retention	FALSE	canonical	2	266	junction_12	38.0998377048524	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCACAGGACTGGGCAT	NA	False	NA	-11	True	AATAAA	-13	NA	66032054	65995421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.14	chr9	-	5402	6	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	22	-8	intron_retention	FALSE	canonical	3	372	junction_1	18.4173830931541	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTCACAGGACTGGGCA	NA	False	NA	-12	True	AATAAA	-12	NA	66003851	65995422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_66000647_66001640_66001735_66001903
ES.35434.15	chr9	-	2023	16	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	24	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	132.531187105359	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTCACAGGACTG	NA	False	NA	-16	True	AATAAA	-8	NA	66032055	65995426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66023732_66023808_66031888
ES.35434.16	chr9	-	2211	15	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	23	-12	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	104.95334240334	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTCACAGGACTG	NA	False	NA	-16	True	AATAAA	-8	NA	66032145	65995426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65995852_65996399_65996645_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.18	chr9	-	1925	15	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	1	-12	combination_of_known_junctions	FALSE	canonical	2	5	junction_14	103.740477802514	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTCACAGGACTG	NA	False	NA	-16	True	AATAAA	-8	NA	66033868	65995426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66033724
ES.35434.19	chr9	-	4458	14	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	22	-12	intron_retention	FALSE	canonical	0	0	junction_12	106.382029002433	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGTCACAGGACTG	NA	False	NA	-16	True	AATAAA	-8	NA	66032146	65995426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012922_66016798_66016911_66031888
ES.35434.2	chr9	-	4397	14	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	20	5	intron_retention	FALSE	canonical	2	266	junction_12	38.7136353515164	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCATGGTAGCACTTTT	NA	False	NA	1	True	AATAAA	-25	NA	66032059	65995409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.22	chr9	-	502	1	Intergenic	novelGene_28837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	66017735	66017233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66017200_66017700
ES.35434.3	chr9	-	5377	13	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	18	4	intron_retention	FALSE	canonical	1	4	junction_2	111.010603847861	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCATGGTAGCACTTT	NA	False	NA	0	True	AATAAA	-24	NA	66032061	65995410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.4	chr9	-	2057	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	14	2	14	-2	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGACTGGGCATGGTAG	NA	False	NA	-6	True	AATAAA	-18	NA	66032154	65995416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.5	chr9	-	1808	14	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	47	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	140.641093424942	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGACTGGGCATGGTAG	NA	False	NA	-6	True	AATAAA	-18	NA	66033822	65995416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66033724
ES.35434.6	chr9	-	4685	3	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	31180	3	-2359	-3	intron_retention	FALSE	canonical	3	372	junction_1	7	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGACTGGGCATGGTA	NA	False	NA	-7	True	AATAAA	-17	NA	66000988	65995417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_65995852_65996399_65996472_65996809
ES.35434.7	chr9	-	4884	14	NIC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	-37	-5	intron_retention	FALSE	canonical	2	266	junction_12	38.3709702893574	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGGACTGGGCATGG	NA	False	NA	-9	True	AATAAA	-15	NA	66032116	65995419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35434.8	chr9	-	1438	12	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	25	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	114.875426599267	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACAGGACTGGGCATG	NA	False	NA	-10	True	AATAAA	-14	NA	66032054	65995420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65997908_66003835_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ES.35435.1	chr9	+	170	1	Intergenic	novelGene_28838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAGAAGAAG	7870	False	NA	NA	False	NA	NA	NA	66048355	66048525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66048400_66048500
ES.35436.1	chr9	-	154	1	Intergenic	novelGene_28839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2569	False	NA	NA	False	NA	NA	NA	66124012	66123858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66123900_66124000
ES.35437.1	chr9	+	15246	78	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-19	1	intron_retention	FALSE	canonical	2	7	junction_16	13.2495795304295	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCCGCTGTTGTTGATC	NA	False	NA	9	True	AATAAA	-20	NA	66257712	66416058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.10	chr9	+	3372	2	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	21384	4742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66279191	66286094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66280024_66283554
ES.35437.12	chr9	+	3355	5	NIC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	36329	22392	intron_retention	FALSE	canonical	2	11	junction_1	2.04633819296811	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	66294136	66303744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209
ES.35437.13	chr9	+	5761	2	NIC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	37715	22392	intron_retention	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	66295522	66303744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66296181_66298641
ES.35437.14	chr9	+	12821	69	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	44515	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	13.9438055972131	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	NA	False	NA	7	True	AATAAA	-18	NA	66302322	66416056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315461_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353364_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.15	chr9	+	11672	62	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-39225	0	intron_retention	FALSE	non_canonical	0	0	junction_2	14.3985203336655	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCCGCTGTTGTTGAT	NA	False	NA	8	True	AATAAA	-19	NA	66309967	66416057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66309998_66315265_66315483_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349184_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66358008_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368974_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.18	chr9	+	9031	47	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2658	-1	intron_retention	FALSE	non_canonical	0	0	junction_39	13.9419706076093	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	NA	False	NA	7	True	AATAAA	-18	NA	66346534	66416056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66346567_66347077_66347189_66349184_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400571_66403254_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.20	chr9	+	8124	42	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2723	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	14.2302390197073	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCCGCTGTTGTTGAT	5122	False	NA	8	True	AATAAA	-19	NA	66355684	66416057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66355815_66358008_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376208_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.21	chr9	+	8051	42	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2630	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	13.9280465915375	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGGGGCCGCTGTTGT	5215	False	NA	4	True	AATAAA	-15	NA	66355777	66416053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376208_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.22	chr9	+	7171	40	NIC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	2209	-1	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	13.0032616148132	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	NA	False	NA	7	True	AATAAA	-18	NA	66360616	66416056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.23	chr9	+	7124	40	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	2253	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.7828085659568	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGCCGCTGTTGTT	NA	False	NA	5	True	AATAAA	-16	NA	66360660	66416054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375063_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.24	chr9	+	4828	30	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	117069	398	-1026	-398	3prime_fragment	FALSE	canonical	3	17	junction_6	10.5441712882974	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTATACTTTTATGGT	1626	False	NA	NA	False	NA	NA	NA	66374876	66415659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.25	chr9	+	7515	28	NIC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-791	-1	intron_retention	FALSE	canonical	3	17	junction_5	10.7068430613413	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	1861	False	NA	7	True	AATAAA	-18	NA	66375111	66416056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.28	chr9	+	180	1	Intergenic	novelGene_28841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66390118	66390298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66390100_66390300
ES.35437.29	chr9	+	3135	17	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-12884	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.088448282192	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGGGCCGCTGTTG	NA	False	NA	3	True	AATAAA	-14	NA	66390952	66416052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394380_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.3	chr9	+	7580	37	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2	-3448	intron_retention	FALSE	canonical	2	7	junction_16	3.07769755210323	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGCCCCACCTGTTTC	NA	False	NA	NA	False	GATAAA	-14	NA	66257729	66356133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293
ES.35437.30	chr9	+	2968	16	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-11645	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.1948312647209	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGGGCCGCTGTTG	NA	False	NA	3	True	AATAAA	-14	NA	66392191	66416052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66403781_66403822_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.31	chr9	+	2150	8	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	145155	1	-874	-1	3prime_fragment	FALSE	canonical	3	33	junction_2	9.45235096552758	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCCGCTGTTGTTGA	8636	False	NA	7	True	AATAAA	-18	NA	66402962	66416056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.32	chr9	+	2923	3	NIC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-151	0	intron_retention	FALSE	canonical	3	45	junction_1	7.5	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCCGCTGTTGTTGAT	NA	False	NA	8	True	AATAAA	-19	NA	66407384	66416057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_66409365_66411869_66412176_66415420
ES.35437.4	chr9	+	15007	78	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_41	13.5739573857244	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGCCGCTGTTGTT	NA	False	NA	5	True	AATAAA	-16	NA	66257729	66416054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66358008_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365648_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.5	chr9	+	15178	78	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	0	-3	intron_retention	FALSE	canonical	2	3	junction_37	13.3794726507769	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGCCGCTGTTGTT	NA	False	NA	5	True	AATAAA	-16	NA	66257731	66416054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66358008_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.6	chr9	+	15199	78	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	3	0	intron_retention	FALSE	canonical	2	3	junction_37	13.3599189609548	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCCGCTGTTGTTGAT	NA	False	NA	8	True	AATAAA	-19	NA	66257734	66416057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66358008_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35437.7	chr9	+	3773	10	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	-69	112313	7	22392	5prime_fragment	FALSE	canonical	2	8	junction_4	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	66257738	66303744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209
ES.35437.8	chr9	+	9394	37	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-28	-1584	intron_retention	FALSE	canonical	2	7	junction_16	3.07769755210323	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCCTAGTGATACTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	66257779	66357997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349187_66349362_66352734_66352975_66353366_66353451_66355293
ES.35437.9	chr9	+	15208	78	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	-28	-3	intron_retention	FALSE	canonical	1	2	junction_50	13.4901624545229	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGGGCCGCTGTTGTT	NA	False	NA	5	True	AATAAA	-16	NA	66257779	66416054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349184_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369182_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376208_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ES.35438.1	chr9	+	6761	1	Antisense	novelGene_ENSMUSG00000032376.13_AS_novelGene_ENSMUSG00000050503.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTATAGAGTAAAATAGTA	NA	False	NA	NA	False	NA	NA	NA	66419146	66425907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_66419100_66425900
ES.35438.2	chr9	+	4707	1	Antisense	novelGene_ENSMUSG00000032376.13_AS_novelGene_ENSMUSG00000050503.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGATTCATTCCCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	66419249	66423956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_66419200_66424000
ES.35439.1	chr9	+	174	1	Intergenic	novelGene_28845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAACATGGGGG	9551	False	NA	NA	False	NA	NA	NA	66457608	66457782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66457600_66457800
ES.3544.1	chr10	+	3144	2	Antisense	novelGene_ENSMUSG00000074802.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	89272399	89278305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_89272469_89275230
ES.3544.2	chr10	+	2400	2	Antisense	novelGene_ENSMUSG00000074802.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCCCCCCCCCCACC	NA	False	NA	NA	False	NA	NA	NA	89272399	89274932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_89274655_89274787
ES.35440.1	chr9	+	157	1	Intergenic	novelGene_28846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66487969	66488126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66488000_66488100
ES.35441.1	chr9	-	261	1	Intergenic	novelGene_28840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	66274155	66273894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66273900_66274200
ES.35442.1	chr9	-	1624	1	Antisense	novelGene_ENSMUSG00000038664.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6227	False	NA	NA	False	NA	NA	NA	66294640	66293016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_66293000_66294600
ES.35443.1	chr9	-	179	1	Intergenic	novelGene_28842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	66395720	66395541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66395500_66395700
ES.35444.1	chr9	-	3741	2	FSM	ENSMUSG00000050503.10	ENSMUST00000056890.10	4035	2	204	90	204	-90	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTGAAGTAACTAAATG	NA	False	NA	NA	False	AATAAA	-20	NA	66421687	66415746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66419301_66421500
ES.35445.1	chr9	-	5423	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	182	2	-2	-2	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCCACCAGTCCTGA	NA	False	NA	NA	False	AATAAA	-17	NA	66500242	66421920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.12	chr9	-	4590	14	NIC	ENSMUSG00000032376.13	novel	5607	15	NA	NA	-2	20	intron_retention	FALSE	canonical	3	110	junction_10	16.0125690276078	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTCTGGTCTTCT	NA	False	NA	1	True	NA	NA	NA	66500290	66425138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.13	chr9	-	2260	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	125	3222	-11	18	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCTTGTCTCTGGTCTT	NA	False	NA	-1	True	NA	NA	NA	66500299	66425140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.14	chr9	-	2135	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	28	634	-2	16	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATTTCTTGTCTCTGGTC	NA	False	NA	-3	True	NA	NA	NA	66500290	66425142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.17	chr9	-	1829	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	75	3703	-31	68	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCAGTATGCACTTTT	NA	False	NA	-9	True	CATAAA	-18	NA	66500349	66425621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.18	chr9	-	1733	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	-49	1113	-49	68	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCAGTATGCACTTTT	NA	False	NA	-9	True	CATAAA	-18	NA	66500367	66425621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.19	chr9	-	1326	1	Intergenic	novelGene_28843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTCATTCTGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	66441041	66439715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66439700_66441000
ES.35445.2	chr9	-	4957	1	NIC	ENSMUSG00000032376.13	novel	5607	15	NA	NA	-235	616	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGAGGAGAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	66427856	66422899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66422900_66427900
ES.35445.20	chr9	-	182	1	Intergenic	novelGene_28844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	66446060	66445878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66445900_66446100
ES.35445.21	chr9	-	8574	1	NIC	ENSMUSG00000032376.13	novel	5607	15	NA	NA	-503	-10989	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTTGTGGTCTGG	NA	False	NA	NA	False	NA	NA	NA	66474711	66466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66466100_66474700
ES.35445.3	chr9	-	3686	12	NIC	ENSMUSG00000032376.13	novel	3662	13	NA	NA	40	23	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	49.8357633209839	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACCTGTGGTACCTGCT	NA	False	NA	NA	False	ATTAAA	-38	NA	66500384	66423492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66500065
ES.35445.4	chr9	-	4013	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	3	1591	3	6	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGTGTCGTGTGTCA	NA	False	NA	NA	False	ATTAAA	-21	NA	66500421	66423509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.5	chr9	-	3765	13	NIC	ENSMUSG00000032376.13	novel	1901	14	NA	NA	-50	4	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	38.6079834864357	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGAGTGTCGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	66500368	66423511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66500065
ES.35445.6	chr9	-	3868	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	-74	-997	32	4	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGAGTGTCGTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	66500392	66423511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.7	chr9	-	6224	14	NIC	ENSMUSG00000032376.13	novel	5607	15	NA	NA	-11	2	intron_retention	FALSE	canonical	3	110	junction_10	16.0125690276078	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGTTGAGTGTCGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	66500299	66423513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35445.9	chr9	-	3905	16	NNC	ENSMUSG00000032376.13	novel	5607	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.4030472531976	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGGTTGAGTGTCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	66500242	66423515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66425861_66426885_66426963_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ES.35446.1	chr9	+	174	1	Intergenic	novelGene_28847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATCC	4766	False	NA	NA	False	NA	NA	NA	66517384	66517558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66517400_66517600
ES.35447.1	chr9	-	132	1	Intergenic	novelGene_28848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAACAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	66562061	66561929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66561900_66562100
ES.35448.1	chr9	+	3845	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	-203	-3	-159	0	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTTTTCCCCCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66620808	66674127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
ES.35448.2	chr9	+	3809	11	NNC	ENSMUSG00000032373.16	novel	3716	11	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.86856030044848	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGATTTTTTCCCCCCC	NA	False	NA	NA	False	AATAAA	-16	NA	66620997	66674126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66667081_66667236_66670528_66670617_66671569
ES.35448.3	chr9	+	1786	10	NNC	ENSMUSG00000032373.16	novel	3639	10	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	5.02831488843767	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGATTTTTTCCCCCCC	NA	False	NA	NA	False	AATAAA	-16	NA	66621008	66674126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66673427
ES.35448.4	chr9	+	3673	11	FSM	ENSMUSG00000032373.16	ENSMUST00000071889.13	3716	11	43	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.86856030044848	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTTTTCCCCCCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66621010	66674127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66669684_66669715_66670528_66670617_66671569
ES.35448.5	chr9	+	180	1	Intergenic	novelGene_28849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	66637244	66637424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66637200_66637400
ES.35448.6	chr9	+	5724	2	ISM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	46436	0	12456	0	3prime_fragment	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGATTTTTTCCCCC	NA	False	NA	NA	False	AATAAA	-14	NA	66667447	66674124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_66670617_66671569
ES.35449.1	chr9	-	3695	1	ISM	ENSMUSG00000032375.16	ENSMUST00000034934.15	4910	6	16569	25	16455	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGTGGAGTGTA	NA	False	NA	NA	False	TTTAAA	-14	NA	66686203	66682508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66682500_66686200
ES.3545.1	chr10	-	7008	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	20	-723	7	283	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTATGACTCCTACC	NA	False	NA	NA	False	ATTAAA	-17	NA	89279809	89244401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.11	chr10	-	6395	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	31	322	18	118	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGTATTGTTTCTC	NA	False	NA	NA	False	GATAAA	-36	NA	89279798	89245006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.14	chr10	-	5724	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	19	22	intron_retention	FALSE	non_canonical	0	0	junction_1	17.078815837558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAACTGTGTTTTGATT	NA	False	NA	5	True	ATTAAA	-39	NA	89279797	89245102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245713_89246283_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.15	chr10	-	6293	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	14	-2	1	2	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGCTTTTTTAATGT	NA	False	NA	-15	True	ATTAAA	-19	NA	89279815	89245122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.16	chr10	-	6079	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	2	1	intron_retention	FALSE	non_canonical	0	0	junction_1	21.0489394326572	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTGCTTTTTTAATG	NA	False	NA	-16	True	ATTAAA	-18	NA	89279814	89245123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269670_89270154_89270224_89272364_89272472_89279716
ES.3545.19	chr10	-	6080	12	NNC	ENSMUSG00000074802.12	novel	6305	11	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	17.078815837558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTTGCTTTTTTAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	89279811	89245124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.21	chr10	-	6162	11	NNC	ENSMUSG00000074802.12	novel	6748	11	NA	NA	4	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	21.6462467878383	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCACTCTGTTTGCTTT	NA	False	NA	-23	True	ATTAAA	-11	NA	89279825	89245130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262283_89262412_89264891_89265008_89266745_89266784_89269617_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.23	chr10	-	5969	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	1	-128	intron_retention	FALSE	non_canonical	0	0	junction_1	17.078815837558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTCAGTTTGGAT	NA	False	NA	NA	False	AATAAA	-36	NA	89279828	89245252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.24	chr10	-	830	1	ISM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	33747	568	23622	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGTCAGTTTGGAT	NA	False	NA	NA	False	AATAAA	-36	NA	89246082	89245252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_89245300_89246100
ES.3545.25	chr10	-	5956	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	4	-140	intron_retention	TRUE	non_canonical	0	0	junction_1	17.078815837558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCATGCCATCTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	89279825	89245264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245611_89245815_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.26	chr10	-	5468	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	39	798	-24	-798	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACACATGTGTGGTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	89279790	89245922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.28	chr10	-	5096	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	14	1195	1	-1195	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTATTCTTGCAGAG	NA	False	NA	NA	False	NA	NA	NA	89279815	89246319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.29	chr10	-	3206	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	-2	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5061013829614	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGTTTTAATGATCTTAA	NA	False	NA	NA	False	ATTAAA	-23	NA	89279818	89248138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89249045_89249165_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272519_89279716
ES.3545.3	chr10	-	6552	12	NNC	ENSMUSG00000074802.12	novel	6748	11	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	18.9610300658225	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGCCTAACTTTATAA	NA	False	NA	49	True	AATAAA	-18	NA	89279840	89244684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.30	chr10	-	3157	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	1	180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9610300658225	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGGTTTTAATGATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	89279815	89248140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89249045_89249165_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.31	chr10	-	3287	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	5	3456	5	180	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGGTTTTAATGATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	89279824	89248140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.33	chr10	-	3000	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	5	3300	5	-104	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATTTTATAACCAATAT	NA	False	NA	NA	False	ATTAAA	-19	NA	89279824	89248424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.34	chr10	-	175	1	Intergenic	novelGene_2711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTTAAA	4052	False	NA	NA	False	NA	NA	NA	89253766	89253591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_89253600_89253800
ES.3545.5	chr10	-	6438	11	NNC	ENSMUSG00000074802.12	novel	6305	11	NA	NA	18	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	21.5983795688473	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGTTTGCCTAACTT	NA	False	NA	44	True	AATAAA	-13	NA	89279798	89244689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.3545.6	chr10	-	6754	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	-11	5	-11	-5	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGTTTGCCTAACTT	NA	False	NA	44	True	AATAAA	-13	NA	89279840	89244689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ES.3545.8	chr10	-	5221	4	NNC	ENSMUSG00000074802.12	novel	6748	11	NA	NA	12323	-52	intron_retention	FALSE	non_canonical	0	0	junction_1	22.3755819291179	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGTATTTCCTGGGCT	437	False	NA	-3	True	ATTAAA	-13	NA	89257381	89244736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245709_89246276_89250355_89252881_89252990_89257318
ES.3545.9	chr10	-	6301	12	NNC	ENSMUSG00000074802.12	novel	2111	12	NA	NA	16	-208	intron_retention	FALSE	non_canonical	0	0	junction_1	17.078815837558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGCTTACAGAAAGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	89279800	89244892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89245622_89245828_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ES.35450.1	chr9	-	305	1	FSM	ENSMUSG00000059237.7	ENSMUST00000112182.3	633	1	383	-55	383	55	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCTTCTTGTTCTCTA	NA	False	NA	NA	False	AATACA	-18	NA	66712837	66712532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66712500_66712800
ES.35451.1	chr9	+	179	1	Intergenic	novelGene_28850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	2476	False	NA	NA	False	NA	NA	NA	66716203	66716382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66716200_66716400
ES.35452.1	chr9	-	3925	6	NNC	ENSMUSG00000053040.14	novel	5205	6	NA	NA	1	-1294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.63033476111609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTACTGTCTCTCCA	NA	False	NA	NA	False	AATAAA	-30	NA	66742007	66723569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736044_66740440_66740612_66741767
ES.35452.2	chr9	-	4367	6	NNC	ENSMUSG00000053040.14	novel	5205	6	NA	NA	-6	-1301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.76194411635517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCATTTTCATTACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	66742014	66723576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741310
ES.35452.3	chr9	-	3483	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	-7	1729	-7	-1729	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGCTTGTCATGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	66742015	66724004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
ES.35452.4	chr9	-	3613	6	NNC	ENSMUSG00000053040.14	novel	5205	6	NA	NA	193	-1778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.76194411635517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTACTTGTAT	NA	False	NA	NA	False	NA	NA	NA	66741737	66724053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741310
ES.35452.5	chr9	-	1214	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	63	3928	-15	362	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCGTAGCCCTTGTCT	NA	False	NA	-3	True	AGTAAA	-15	NA	66741945	66726203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
ES.35452.6	chr9	-	1720	6	NNC	ENSMUSG00000053040.14	novel	5205	6	NA	NA	13	361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.76194411635517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGCGTAGCCCTTGTC	NA	False	NA	-4	True	AGTAAA	-14	NA	66741995	66726204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741310
ES.35453.1	chr9	+	1428	1	Genic_Genomic	ENSMUSG00000091745.2	novel	NA	NA	NA	NA	336	928	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTTTTGCTTGACAT	NA	False	NA	NA	False	NA	NA	NA	66742316	66743744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_66742300_66743700
ES.35454.1	chr9	+	181	1	Intergenic	novelGene_28851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATTAAATAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	66744988	66745169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66745000_66745200
ES.35455.1	chr9	+	1589	1	Antisense	novelGene_ENSMUSG00000036943.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCTGAGGCTGGGTAG	NA	False	NA	NA	False	NA	NA	NA	66753322	66754911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_66753300_66754900
ES.35456.1	chr9	+	2196	1	Intergenic	novelGene_28853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66789010	66791206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66789000_66791200
ES.35457.1	chr9	-	4847	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	-61	-53	-61	53	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAATTGGTCTATGTT	7690	False	NA	52	True	AATATA	-17	NA	66827030	66750892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ES.35457.10	chr9	-	180	1	Intergenic	novelGene_28852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66757618	66757438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66757400_66757600
ES.35457.11	chr9	-	177	1	Intergenic	novelGene_28854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACATCTATTGAT	3109	False	NA	NA	False	NA	NA	NA	66792386	66792209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66792200_66792400
ES.35457.3	chr9	-	4683	8	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	6309	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	17.9795802543455	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGACTCTTAAGTGG	NA	False	NA	-4	True	AATAAA	-18	NA	66820660	66750948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66820529
ES.35457.4	chr9	-	4699	8	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.2163864334801	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGACTCTTAAGTGG	7772	False	NA	-4	True	AATAAA	-18	NA	66826948	66750948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762018_66768118_66768180_66770704_66770766_66826791
ES.35457.5	chr9	-	3228	9	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	-12	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.1779399272855	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGACTCTTAAGTGG	7739	False	NA	-4	True	AATAAA	-18	NA	66826981	66750948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66752485_66753998_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ES.35457.6	chr9	-	4649	7	NIC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	20	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.9412621877305	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGACTCTTAAGTGG	7771	False	NA	-4	True	AATAAA	-18	NA	66826949	66750948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66826791
ES.35457.7	chr9	-	4781	8	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.7377170652224	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTATGACTCTTA	7768	False	NA	-9	True	AATAAA	-13	NA	66826952	66750953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760372_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ES.35457.8	chr9	-	4716	8	NNC	ENSMUSG00000036943.10	novel	4733	8	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.5604363073277	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTATGACTCTTA	7745	False	NA	-9	True	AATAAA	-13	NA	66826975	66750953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770719_66770766_66826791
ES.35457.9	chr9	-	2438	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	-12	2307	-12	-2307	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACAAGTATTTTCTT	7739	False	NA	NA	False	ATTAAA	-11	NA	66826981	66753252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ES.35458.1	chr9	-	183	1	Intergenic	novelGene_28855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAAAAG	8199	False	NA	NA	False	NA	NA	NA	66839475	66839292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66839300_66839500
ES.35459.1	chr9	-	188	1	Intergenic	novelGene_28856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	66851440	66851252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66851300_66851400
ES.3546.1	chr10	+	159	1	Intergenic	novelGene_2712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	89500504	89500663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_89500500_89500700
ES.35460.1	chr9	+	536	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	-28	-9	-28	5	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGCTTCTCTCTCTC	NA	False	NA	39	True	AATAAA	-23	NA	66853339	66856803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ES.35460.2	chr9	+	495	4	NNC	ENSMUSG00000036781.14	novel	499	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	28	junction_2	5096.17941861025	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	False	NA	32	True	AATAAA	-16	NA	66853367	66856796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66853463_66854112_66854216_66854868_66854980_66856610
ES.35460.3	chr9	+	587	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	-5	-7	0	5	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGCTTCTCTCTCTC	NA	False	NA	39	True	AATAAA	-23	NA	66853367	66856803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
ES.35460.4	chr9	+	2052	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	6	-1559	1	1555	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCATGTGTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	66853373	66858353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ES.35460.5	chr9	+	549	5	NNC	ENSMUSG00000036781.14	novel	575	5	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5730.70538851894	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTCCTCCCTCTGCTT	NA	False	NA	30	True	AATAAA	-14	NA	66853386	66856794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66855990_66856610
ES.35460.7	chr9	+	407	4	NNC	ENSMUSG00000036781.14	novel	566	4	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_1	5393.61797765553	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTATTTTGGTGTCAG	NA	False	NA	-15	True	TATAAA	-14	NA	66853595	66856749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66853644_66854112_66854222_66854868_66854980_66856610
ES.35460.8	chr9	+	768	4	NNC	ENSMUSG00000036781.14	novel	566	4	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5438.64102715212	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	False	NA	32	True	AATAAA	-16	NA	66853598	66856796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66853961_66854112_66854222_66854868_66854980_66856610
ES.35460.9	chr9	+	689	4	NNC	ENSMUSG00000036781.14	novel	566	4	NA	NA	28	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5436.76498991409	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGTGTCAGTTTTTC	NA	False	NA	-9	True	TATAAA	-20	NA	66853664	66856755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_66853989_66854112_66854222_66854868_66854980_66856610
ES.35461.1	chr9	-	2084	1	Antisense	novelGene_ENSMUSG00000036781.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCCTTGGCCATGAAG	NA	False	NA	NA	False	NA	NA	NA	66853833	66851749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_66851700_66853800
ES.35462.1	chr9	+	179	1	Intergenic	novelGene_28857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTTTTTTAAATGG	8441	False	NA	NA	False	NA	NA	NA	66881017	66881196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66881000_66881200
ES.35463.1	chr9	-	2015	6	FSM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	26	-10	26	5	multi-exon	FALSE	canonical	3	42	junction_2	9.68710483064987	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAGTTCCTAAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	66882740	66862664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
ES.35463.2	chr9	-	4736	5	NIC	ENSMUSG00000032370.9	novel	2031	6	NA	NA	32	0	intron_retention	FALSE	canonical	3	56	junction_1	4.76313972081441	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGCACTTTTCAGT	NA	False	NA	NA	False	AATAAA	-11	NA	66882734	66862674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66863483_66874960_66878219_66878457_66878649_66881999_66882067_66882322
ES.35463.4	chr9	-	3668	4	ISM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	31	12547	31	-12547	5prime_fragment	FALSE	canonical	3	65	junction_1	1.88561808316413	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATGACTGTTTTCAA	NA	False	NA	NA	False	AATAAA	-14	NA	66882735	66875221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66878219_66878457_66878649_66881999_66882067_66882322
ES.35463.5	chr9	-	2461	4	ISM	ENSMUSG00000032370.9	ENSMUST00000215172.2	1806	5	-18	13744	-18	-13739	5prime_fragment	FALSE	canonical	3	65	junction_1	1.88561808316413	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTACCCATTTTTAATA	NA	False	NA	NA	False	AATAAA	-1	NA	66882720	66876413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66878219_66878457_66878649_66881999_66882067_66882322
ES.35464.1	chr9	+	333	1	Intergenic	novelGene_28858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCATTATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66889822	66890155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_66889800_66890200
ES.35465.1	chr9	-	1843	3	Intergenic	novelGene_28859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAAAGACCCACCCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	66904571	66895651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66896134_66901924_66903110_66904395
ES.35466.1	chr9	-	5003	1	Genic_Genomic	ENSMUSG00000032366.16	novel	NA	NA	NA	NA	7170	1937	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66932937	66927934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_66927900_66932900
ES.35466.10	chr9	-	2801	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113689.8	904	8	-165	-1732	33	-1	multi-exon	FALSE	canonical	3	17	junction_1	204.866407441433	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGGTGGTCCTGTCG	NA	False	NA	-4	True	AATAAA	-22	NA	66951156	66929875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66931848_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.13	chr9	-	865	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	52	690	-17	-660	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCTTCAATGCGTTTT	NA	False	NA	-10	True	TTTAAA	-16	NA	66951032	66930563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.14	chr9	-	1074	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-54	694	1	-662	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCCTTCAATGCGTT	NA	False	NA	-12	True	TTTAAA	-14	NA	66951243	66930565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.15	chr9	-	844	3	ISM	ENSMUSG00000032366.16	ENSMUST00000113689.8	904	8	12193	-469	1309	467	3prime_fragment	FALSE	canonical	3	17	junction_1	294	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGTCAGAACCTTC	NA	False	NA	NA	False	AATAAA	-7	NA	66938798	66931138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66931848_66938310_66938381_66938733
ES.35466.16	chr9	-	2819	9	NIC	ENSMUSG00000032366.16	novel	1259	10	NA	NA	-53	0	intron_retention	FALSE	canonical	3	24	junction_7	235.545643135253	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTACTTTTTTATT	NA	False	NA	1	True	AATAAA	-22	NA	66956610	66935173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ES.35466.17	chr9	-	2745	8	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	22	-1	intron_retention	FALSE	canonical	3	209	junction_4	194.584329339466	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951222	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.18	chr9	-	1245	9	NIC	ENSMUSG00000032366.16	novel	1208	10	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	203.579683416592	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951218	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.19	chr9	-	3488	7	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	213	junction_3	181.659632891356	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951198	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.2	chr9	-	3659	1	NIC	ENSMUSG00000032366.16	novel	1714	8	NA	NA	6577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66933530	66929871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66929900_66933500
ES.35466.20	chr9	-	4046	7	ISM	ENSMUSG00000032366.16	ENSMUST00000113689.8	904	8	-246	3567	7	-1	5prime_fragment	FALSE	canonical	3	430	junction_3	81.4671031084872	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951237	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.21	chr9	-	3586	7	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	11	-1	intron_retention	FALSE	canonical	3	256	junction_1	140.001686497778	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951112	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.22	chr9	-	2742	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	25	-1	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	66951219	66935174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.23	chr9	-	1225	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-194	-144	-20	-12	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCGTGCATCTCAGGG	NA	False	NA	-11	True	AATAAA	-10	NA	66951209	66935185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.24	chr9	-	2741	9	FSM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	-70	-874	-57	-8	multi-exon	FALSE	canonical	3	24	junction_7	240.497628626563	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66956614	66935255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ES.35466.25	chr9	-	5335	4	NIC	ENSMUSG00000032366.16	novel	998	8	NA	NA	9	-8	intron_retention	FALSE	canonical	3	580	junction_1	32.2524762184584	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGCTATTCTTTT	NA	False	NA	-16	True	AATAAA	-13	NA	66951051	66935255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.27	chr9	-	1019	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-30	-9	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	205.517266765534	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGCTATTCTTT	NA	False	NA	-17	True	AATAAA	-12	NA	66951153	66935256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66935450_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.28	chr9	-	1821	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	14	-9	intron_retention	FALSE	canonical	3	173	junction_1	201.214780160658	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGCTATTCTTT	NA	False	NA	-17	True	AATAAA	-12	NA	66951109	66935256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.29	chr9	-	3725	6	NIC	ENSMUSG00000032366.16	novel	998	8	NA	NA	10	-9	intron_retention	FALSE	canonical	1	2	junction_2	246.830306080919	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGCTATTCTTT	NA	False	NA	-17	True	AATAAA	-12	NA	66951074	66935256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66938381_66938733_66938797_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.3	chr9	-	1801	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	-89	2	-34	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951278	66929873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.30	chr9	-	2444	9	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	-15	-10	intron_retention	FALSE	canonical	3	10	junction_4	231.293880971806	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGTTTGCTATTCTT	NA	False	NA	-18	True	AATAAA	-11	NA	66951138	66935257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66935450_66936945_66938381_66938733_66938797_66939232_66939309_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.31	chr9	-	3030	7	NIC	ENSMUSG00000032366.16	novel	998	8	NA	NA	-18	-10	intron_retention	FALSE	canonical	3	173	junction_1	200.982931834743	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGTTTGCTATTCTT	NA	False	NA	-18	True	AATAAA	-11	NA	66951033	66935257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66935450_66936945_66938381_66938733_66938797_66939232_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.32	chr9	-	4269	5	NIC	ENSMUSG00000032366.16	novel	2890	8	NA	NA	-21	2	intron_retention	FALSE	canonical	3	580	junction_2	28.6127157047352	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGAAGTTAGTGGTGC	NA	False	NA	-7	True	AATAAA	-17	NA	66951210	66936127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66938381_66938733_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.33	chr9	-	1657	8	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_4	194.584329339466	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951089	66936129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.34	chr9	-	1789	8	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-206	800	23	0	5prime_fragment	FALSE	canonical	3	256	junction_1	130.784134343269	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951221	66936129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.35	chr9	-	2177	1	NIC	ENSMUSG00000032366.16	novel	1714	8	NA	NA	-4164	-1035	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66944271	66942094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66942100_66944300
ES.35466.36	chr9	-	1521	2	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	-49	6765	-4	-1035	5prime_fragment	FALSE	canonical	3	619	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66951064	66942094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_66943411_66950859
ES.35466.37	chr9	-	2264	1	Genic_Genomic	ENSMUSG00000032366.16	novel	NA	NA	NA	NA	-3	-7924	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGTAGAGTTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	66951247	66948983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_66949000_66951200
ES.35466.4	chr9	-	1742	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	-136	1	24	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951220	66929874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.5	chr9	-	1829	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	66	3	-65	0	multi-exon	FALSE	canonical	3	24	junction_7	239.532846129711	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66956622	66929874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ES.35466.7	chr9	-	2322	7	NIC	ENSMUSG00000032366.16	novel	1607	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	213	junction_3	161.133140256401	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951033	66929874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66940147_66941157_66941276_66943276_66943411_66950859
ES.35466.8	chr9	-	1837	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113697.8	1742	9	-73	-22	58	0	multi-exon	FALSE	canonical	3	24	junction_7	230.863460729497	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66956630	66929874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ES.35466.9	chr9	-	2924	6	NIC	ENSMUSG00000032366.16	novel	2890	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	370	junction_1	101.57676899764	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	False	NA	-3	True	AATAAA	-23	NA	66951199	66929874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_66930724_66938310_66938381_66938733_66940147_66941157_66941276_66943276_66943411_66950859
ES.35467.1	chr9	-	177	1	Intergenic	novelGene_28860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGTGACTGAATA	NA	False	NA	NA	False	NA	NA	NA	66979502	66979325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_66979300_66979500
ES.35468.1	chr9	+	185	1	Intergenic	novelGene_28861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAGAAA	5214	False	NA	NA	False	NA	NA	NA	67053046	67053231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_67053000_67053200
ES.35469.1	chr9	+	179	1	Intergenic	novelGene_28862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGAGTTTGTTTTTTT	9029	False	NA	NA	False	NA	NA	NA	67056861	67057040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_67056900_67057000
ES.3547.1	chr10	-	3310	10	ISM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	29546	-9	-2268	9	3prime_fragment	FALSE	canonical	2	10	junction_2	7.02025288841392	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTCAGTAGTTATTT	NA	False	NA	9	True	AATAAA	-26	NA	89492601	89474573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569
ES.3547.2	chr10	-	4692	19	NNC	ENSMUSG00000069539.12	novel	3566	18	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.87400787401181	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTTCTTTGGAACA	NA	False	NA	-6	True	AATAAA	-11	NA	89522128	89474588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89475161_89475257_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ES.3547.3	chr10	-	4465	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	1	351	1	-351	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGGCTGAATGTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	89522146	89474933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ES.3547.4	chr10	-	536	2	NNC	ENSMUSG00000069539.12	novel	4817	18	NA	NA	14521	-353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAATGGCTGAATGTTC	5497	False	NA	NA	False	AATAAA	-13	NA	89475516	89474935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89475208_89475252
ES.3547.5	chr10	-	3944	18	NNC	ENSMUSG00000069539.12	novel	4817	18	NA	NA	-12	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.10057881651859	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTCAAGTATAGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	89522159	89475424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488876_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ES.3547.6	chr10	-	3990	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	-35	-389	-18	106	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTCAAGTATAGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	89522165	89475424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ES.3547.9	chr10	-	3443	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	-29	152	-12	-152	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCACCTGGTACCTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	89522159	89475965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ES.35470.1	chr9	+	176	1	Intergenic	novelGene_28865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAACAAAATATCAAA	NA	False	NA	NA	False	NA	NA	NA	67495041	67495217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_67495000_67495200
ES.35471.1	chr9	-	12302	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74355	2	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_58	17.5065895526389	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAAGGTTTCATGG	NA	False	NA	NA	False	AATAAA	-17	NA	67541340	67124366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466986_67541172
ES.35471.10	chr9	-	10667	58	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74341	1	intron_retention	FALSE	canonical	3	27	junction_57	17.1709669286024	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTGTTTCAGTTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	67541326	67127934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.14	chr9	-	8634	60	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74302	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	23.1443889656172	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCAAAGCTGTTTCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	67541287	67127938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230430_67239031_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67356658_67356687_67357903_67358001_67367197_67367272_67466895_67466973_67541172
ES.35471.16	chr9	-	8754	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74347	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6550210332312	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCAAAGCTGTTTCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	67541332	67127938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134344_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.17	chr9	-	8601	58	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74314	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_56	19.112116760817	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCAAAGCTGTTTCAG	NA	False	NA	-11	True	AATAAA	-15	NA	67541299	67127939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67466895_67466973_67541172
ES.35471.18	chr9	-	5491	36	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74367	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	21.6336849965652	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCAAAGCTGTTTCAG	NA	False	NA	-11	True	AATAAA	-15	NA	67541352	67127939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.19	chr9	-	9799	40	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-21083	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	18.593474426684	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCAAAGCTGTTTCAG	7912	False	NA	-11	True	AATAAA	-15	NA	67259012	67127939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202915_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403
ES.35471.2	chr9	-	12159	58	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74310	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	18.6226231490539	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGAACTTGTGTGAAGG	NA	False	NA	NA	False	AATAAA	-9	NA	67541295	67124374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67541172
ES.35471.20	chr9	-	5039	32	NIC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-1137	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	18.8241216164418	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGCAAAGCTGTTTCAG	NA	False	NA	-11	True	AATAAA	-15	NA	67239066	67127939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013
ES.35471.23	chr9	-	8626	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74355	-107	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_58	17.5065895526389	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTTATTTTTTTTTCC	NA	False	NA	-114	True	NA	NA	NA	67541340	67128042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466986_67541172
ES.35471.25	chr9	-	8473	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74356	7	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_58	17.1195697102182	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACAGAGGTCTGTGTAAG	NA	False	NA	1	True	AATAAA	-30	NA	67541341	67128183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.26	chr9	-	5380	30	NIC	ENSMUSG00000052698.16	novel	8330	59	NA	NA	4594	0	intron_retention	FALSE	canonical	3	55	junction_27	13.8338192160466	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67230352	67128190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254
ES.35471.27	chr9	-	8501	60	NNC	ENSMUSG00000052698.16	novel	8330	59	NA	NA	-74302	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.439314680344	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67541287	67128190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67134839_67134929_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.29	chr9	-	8478	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74355	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_58	17.5065895526389	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67541340	67128190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466986_67541172
ES.35471.30	chr9	-	7915	55	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74341	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_45	21.2278206693568	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67541326	67128190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273182_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67367197_67367272_67466895_67466986_67541172
ES.35471.32	chr9	-	8362	60	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74310	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.6174301439275	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGAGTCACAGAGGT	NA	False	NA	-8	True	AATAAA	-21	NA	67541295	67128192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169215_67169274_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273182_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.33	chr9	-	8530	60	NNC	ENSMUSG00000052698.16	novel	8330	59	NA	NA	-74337	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	20.8727557680457	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGAGTCACAGAGGT	NA	False	NA	-8	True	AATAAA	-21	NA	67541322	67128192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67446613_67446686_67466895_67466986_67541172
ES.35471.36	chr9	-	8457	60	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74304	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_56	20.5880372915288	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGAGTCACAGAGG	NA	False	NA	-9	True	AATAAA	-20	NA	67541289	67128193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67353892_67353939_67367197_67367272_67466895_67466973_67541172
ES.35471.37	chr9	-	8564	60	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74340	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_56	20.3336292388633	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTGGAGTCACAGAGG	NA	False	NA	-9	True	AATAAA	-20	NA	67541325	67128193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304972_67357889_67358001_67367197_67367272_67466895_67466973_67541172
ES.35471.39	chr9	-	8576	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74341	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	22.2969434247834	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTCTGGAGTCACAGAG	NA	False	NA	-10	True	AATAAA	-19	NA	67541326	67128194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169358_67169958_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251510_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293842_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.4	chr9	-	8732	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74349	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	19.4760440061835	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTCAGTTTATGCAGA	NA	False	NA	-1	True	AATAAA	-25	NA	67541334	67127929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241472_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466986_67541172
ES.35471.41	chr9	-	8594	61	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74364	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_56	21.7628889013691	176	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTCTGGAGTCACAGA	NA	False	NA	-11	True	AATAAA	-18	NA	67541349	67128195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67356658_67356687_67357903_67358001_67367197_67367272_67466895_67466973_67541172
ES.35471.42	chr9	-	5432	23	NIC	ENSMUSG00000052698.16	novel	3161	6	NA	NA	8180	-43	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.0009242924375	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	67226766	67152506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_67154885_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598
ES.35471.43	chr9	-	7287	44	ISM	ENSMUSG00000052698.16	ENSMUST00000040025.14	12132	58	72	54100	72	-26005	5prime_fragment	FALSE	canonical	3	34	junction_34	11.7083265568814	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCATTTGGACAATGGG	NA	False	NA	NA	False	AGTAAA	-22	NA	67466913	67178468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895
ES.35471.44	chr9	-	6135	43	NNC	ENSMUSG00000052698.16	novel	582	6	NA	NA	-74343	-36171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.2869937159256	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTTTTACTCTGTGCT	NA	False	NA	NA	False	AATAAA	-12	NA	67541328	67188634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67189060_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.45	chr9	-	4516	34	NNC	ENSMUSG00000052698.16	novel	582	6	NA	NA	-74285	-66389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7547442993379	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAAGTGGTATTGGGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	67541270	67218852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67218965_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.46	chr9	-	157	1	Intergenic	novelGene_28863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	1415	False	NA	NA	False	NA	NA	NA	67265509	67265352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_67265400_67265500
ES.35471.47	chr9	-	3467	10	NNC	ENSMUSG00000052698.16	novel	582	6	NA	NA	-74277	8874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3958984806942	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTCTTCTAGCTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	67541262	67290971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67293374_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35471.48	chr9	-	1509	1	Intergenic	novelGene_28864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67340937	67339428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_67339400_67340900
ES.35471.49	chr9	-	3149	1	Intergenic	novelGene_28866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	67541326	67538177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_67538200_67541300
ES.35471.8	chr9	-	8718	59	NNC	ENSMUSG00000052698.16	novel	12132	58	NA	NA	-74352	1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_58	17.1195697102182	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTGTTTCAGTTTAT	NA	False	NA	-6	True	AATAAA	-20	NA	67541337	67127934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895_67466973_67541172
ES.35472.1	chr9	+	1339	2	FSM	ENSMUSG00000091956.3	ENSMUST00000171652.3	1327	2	-11	-1	-11	1	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGCAGCATTGATGTT	NA	False	NA	NA	False	AATAAA	-23	NA	67666707	67668213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_67666799_67666965
ES.35472.2	chr9	+	5257	1	Genic_Genomic	ENSMUSG00000091956.3	novel	NA	NA	NA	NA	927	4690	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAGATTGCATTGATAT	NA	False	NA	NA	False	NA	NA	NA	67667645	67672902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_67667600_67672900
ES.35473.1	chr9	-	6359	2	FSM	ENSMUSG00000055125.8	ENSMUST00000186205.2	1414	2	-8	-4937	-8	4936	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGTATGGTTC	NA	False	NA	NA	False	NA	NA	NA	67667520	67661057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_67666326_67666429
ES.35473.2	chr9	-	2125	1	FSM	ENSMUSG00000055125.8	ENSMUST00000068526.7	1497	1	984	-1612	984	1612	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCTTCATTCCAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	67666506	67664381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_67664400_67666500
ES.35473.3	chr9	-	1509	1	FSM	ENSMUSG00000055125.8	ENSMUST00000196844.2	1496	1	-13	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGACTTGGGGGGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	67667503	67665994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_67666000_67667500
ES.35473.4	chr9	-	836	2	FSM	ENSMUSG00000055125.8	ENSMUST00000186205.2	1414	2	578	0	556	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGACTTGGGGGGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	67666934	67665994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_67666326_67666429
ES.35474.1	chr9	+	184	1	Intergenic	novelGene_28867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAACCCTGGA	8636	False	NA	NA	False	NA	NA	NA	67742602	67742786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_67742600_67742800
ES.35475.1	chr9	+	11401	83	NIC	ENSMUSG00000035284.11	novel	11527	85	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	4.40586651254363	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGGCTTGTTTTTAAT	NA	False	NA	8	True	ATTAAA	-16	NA	67747676	67902922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_67747809_67759772_67759817_67760977_67761021_67766071_67766168_67768065_67768168_67778457_67778568_67781136_67781197_67783508_67783569_67785378_67785460_67786359_67786418_67788611_67788740_67790734_67790842_67791853_67792026_67793538_67793602_67796967_67797095_67797576_67797672_67800362_67800506_67801239_67801433_67802611_67802727_67803369_67803507_67804355_67804480_67805914_67806033_67808726_67808857_67810122_67810202_67810840_67810981_67813074_67813229_67815273_67815354_67816843_67816904_67817377_67817538_67818788_67818906_67820212_67820317_67820487_67820656_67821088_67821394_67822862_67823011_67823627_67823737_67826519_67826654_67828140_67828298_67829121_67829202_67830125_67830186_67830961_67831125_67833051_67833166_67834201_67834306_67834643_67834812_67836642_67836948_67837895_67838044_67839721_67839873_67841722_67841833_67843573_67843744_67844940_67845189_67846204_67846435_67847740_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67862948_67863076_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ES.35475.10	chr9	+	4856	10	NIC	ENSMUSG00000035284.11	novel	11527	85	NA	NA	-5974	1	intron_retention	FALSE	canonical	3	12	junction_2	3.71184290855335	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTGGTGGGCTTGTTT	NA	False	NA	3	True	ATTAAA	-11	NA	67873261	67902917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ES.35475.2	chr9	+	11379	3	NNC	ENSMUSG00000035284.11	novel	2669	27	NA	NA	6	-42010	intron_retention	FALSE	non_canonical	0	0	junction_2	3.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTACTGTTGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	67747683	67771082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_67747809_67759772_67769757_67769812
ES.35475.3	chr9	+	3905	33	NIC	ENSMUSG00000035284.11	novel	11527	85	NA	NA	7	8409	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	2.64279681398325	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAATTTTTGGTCAGCTG	NA	False	NA	NA	False	TATAAA	-14	NA	67747684	67821501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_67747809_67759772_67759817_67760977_67761021_67766071_67766168_67768065_67768168_67778457_67778568_67781136_67781197_67783508_67783569_67785378_67785460_67786359_67786418_67788611_67788740_67790734_67790842_67791853_67792026_67793538_67793602_67796967_67797095_67797576_67797672_67800362_67800506_67801239_67801433_67802611_67802727_67803369_67803507_67804355_67804480_67805914_67806033_67808726_67808857_67810122_67810202_67810840_67810981_67813074_67813229_67815273_67815354_67816843_67816904_67817377_67817538_67818788_67818906_67820212_67820317_67820487_67820656_67821088
ES.35475.4	chr9	+	4048	2	NNC	ENSMUSG00000035284.11	novel	2669	27	NA	NA	19261	-42030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7529	False	NA	NA	False	NA	NA	NA	67766954	67771062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_67769753_67769812
ES.35475.5	chr9	+	5464	35	NIC	ENSMUSG00000035284.11	novel	11527	85	NA	NA	-17447	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	5.16140856824031	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTGGTGGGCTTGTTT	3172	False	NA	3	True	ATTAAA	-11	NA	67843622	67902917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_67843744_67844940_67845189_67846204_67846435_67847740_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ES.35475.6	chr9	+	5514	36	NNC	ENSMUSG00000035284.11	novel	11527	85	NA	NA	-17371	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.19607387105586	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGGCTTGTTTTTAAT	3248	False	NA	8	True	ATTAAA	-16	NA	67843698	67902922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_67843744_67844940_67845189_67846210_67846435_67847740_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67862948_67863076_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ES.35475.7	chr9	+	1470	8	ISM	ENSMUSG00000035284.11	ENSMUST00000077879.7	11527	85	100105	45138	-13287	-24033	internal_fragment	FALSE	canonical	2	5	junction_1	2.1946130708196	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTATTCGCTAAGATACTT	7332	False	NA	NA	False	NA	NA	NA	67847782	67857782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514
ES.35475.8	chr9	+	4905	32	ISM	ENSMUSG00000035284.11	ENSMUST00000077879.7	11527	85	102958	0	-10434	0	3prime_fragment	FALSE	canonical	2	4	junction_7	4.81261782428032	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGTGGGCTTGTTTTTA	NA	False	NA	6	True	ATTAAA	-14	NA	67850635	67902920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67862948_67863076_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ES.35476.1	chr9	-	1376	1	Antisense	novelGene_ENSMUSG00000035284.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTCACATCTGTACCTT	NA	False	NA	NA	False	NA	NA	NA	67787645	67786269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_67786300_67787600
ES.35477.1	chr9	-	3436	1	Antisense	novelGene_ENSMUSG00000035284.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAACAACCTAGAATT	NA	False	NA	NA	False	AATAGA	-31	NA	67802509	67799073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_67799100_67802500
ES.35478.1	chr9	+	179	1	Intergenic	novelGene_28868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATCCAGTAGGA	NA	False	NA	NA	False	NA	NA	NA	68106264	68106443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_68106300_68106400
ES.35479.1	chr9	-	1993	1	Intergenic	novelGene_28869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTCCGTTTTGAATTGG	8339	False	NA	NA	False	NA	NA	NA	68560915	68558922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_68558900_68560900
ES.3548.1	chr10	+	1316	1	Antisense	novelGene_ENSMUSG00000019948.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCGGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	89552089	89553405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_89552100_89553400
ES.35480.1	chr9	-	186	1	Intergenic	novelGene_28870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTATACAGAGGG	NA	False	NA	NA	False	NA	NA	NA	68681134	68680948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_68680900_68681100
ES.35481.1	chr9	-	2121	1	Intergenic	novelGene_28871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAACCATTTAGCCCCT	NA	False	NA	NA	False	NA	NA	NA	68786489	68784368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_68784400_68786500
ES.35482.1	chr9	-	1944	1	Intergenic	novelGene_28872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCACAAACCAAACCAGCA	NA	False	NA	NA	False	NA	NA	NA	68792055	68790111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_68790100_68792100
ES.35483.1	chr9	+	5932	10	FSM	ENSMUSG00000032238.18	ENSMUST00000113624.3	2591	10	288	-3629	288	3629	multi-exon	FALSE	canonical	0	0	junction_1	1.19670329047433	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGTGCTGACTGGTA	NA	False	NA	NA	False	NA	NA	NA	69197251	69290720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69197331_69255413_69255500_69269020_69269163_69271447_69271844_69278496_69278619_69280370_69280504_69281296_69281405_69282666_69282778_69284059_69284173_69286078
ES.35484.1	chr9	+	4264	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	-5	-90	-5	90	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCTAAAGAAGTGGC	4647	False	NA	6	True	TATAAA	-17	NA	69305182	69340494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.10	chr9	+	3290	4	NNC	ENSMUSG00000032235.16	novel	5475	14	NA	NA	0	-3429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.3790856308682	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4669	False	NA	NA	False	NA	NA	NA	69305204	69311034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69310122_69310327
ES.35484.11	chr9	+	4129	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-44	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	34.1619671564739	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4669	False	NA	25	True	AATAAA	-19	NA	69305204	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317372_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.12	chr9	+	4275	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-50	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	50.0901737889187	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATGTGTTTGTCATTT	4669	False	NA	19	True	AATAAA	-13	NA	69305204	69340354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69324095_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.13	chr9	+	4680	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-44	intron_retention	FALSE	canonical	3	101	junction_3	14.2112344176524	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4669	False	NA	25	True	AATAAA	-19	NA	69305204	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.14	chr9	+	4055	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-44	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.650887391304	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4669	False	NA	25	True	AATAAA	-19	NA	69305204	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.15	chr9	+	5184	14	NNC	ENSMUSG00000032235.16	novel	5475	14	NA	NA	0	-51	intron_retention	FALSE	canonical	2	5	junction_1	51.83725100462	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAATGTGTTTGTCATT	4669	False	NA	18	True	AATAAA	-12	NA	69305204	69340353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69335857_69339322
ES.35484.16	chr9	+	5000	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-44	intron_retention	FALSE	canonical	3	101	junction_2	12.7769323391806	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4669	False	NA	25	True	AATAAA	-19	NA	69305204	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.17	chr9	+	3960	16	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-44	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	30.4426601261381	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4669	False	NA	25	True	AATAAA	-19	NA	69305204	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.18	chr9	+	3538	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-484	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	31.7888441476707	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGAAATTCCTTTGTG	4669	False	NA	NA	False	ATTAAA	-22	NA	69305204	69339920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.19	chr9	+	3983	15	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	45.0625981841043	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATTTTCTTGTTGTTC	4669	False	NA	63	True	AATACA	-15	NA	69305204	69340398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324236_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.2	chr9	+	16533	10	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-4	-44	intron_retention	FALSE	canonical	3	101	junction_2	15.06283137026	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4648	False	NA	25	True	AATAAA	-19	NA	69305183	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69335857_69339322
ES.35484.21	chr9	+	3878	15	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	3	-49	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	50.4868643251664	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4676	False	NA	20	True	AATAAA	-14	NA	69305211	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335632_69335857_69339322
ES.35484.22	chr9	+	3854	14	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	3	-44	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	36.1261759907685	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4676	False	NA	25	True	AATAAA	-19	NA	69305211	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.23	chr9	+	3853	13	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	90	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	46.8952733936659	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGTCTAAAGAAGTGGC	4681	False	NA	6	True	TATAAA	-17	NA	69305216	69340494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.24	chr9	+	4094	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-490	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.8830668951649	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGTTGAAATTCC	4683	False	NA	NA	False	ATTAAA	-16	NA	69305218	69339914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305782_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.25	chr9	+	3886	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-51	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	42.3663388395394	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAATGTGTTTGTCATT	4683	False	NA	18	True	AATAAA	-12	NA	69305218	69340353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.26	chr9	+	3356	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	2	-490	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	42.3416618300535	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTGTTGAAATTCC	4685	False	NA	NA	False	ATTAAA	-16	NA	69305220	69339914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.27	chr9	+	3363	15	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	4	-488	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.9556223546117	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTGAAATTCCTT	4687	False	NA	NA	False	ATTAAA	-18	NA	69305222	69339916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69306913_69307001_69307758_69307864_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.28	chr9	+	7550	15	ISM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	36	49	5	-49	intron_retention	FALSE	canonical	3	101	junction_3	11.9454542630668	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4688	False	NA	20	True	AATAAA	-14	NA	69305223	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597
ES.35484.29	chr9	+	4094	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	5	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	35.014028934446	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAATGTGTTTGTCATT	4688	False	NA	18	True	AATAAA	-12	NA	69305223	69340353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335585_69335857_69339322
ES.35484.3	chr9	+	3688	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	-3	484	-3	-484	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGAAATTCCTTTGTG	4649	False	NA	NA	False	ATTAAA	-22	NA	69305184	69339920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.30	chr9	+	4063	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	5	-49	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	34.6573064286434	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4688	False	NA	20	True	AATAAA	-14	NA	69305223	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324236_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.31	chr9	+	5445	11	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	7	-488	intron_retention	FALSE	canonical	0	0	junction_1	50.0543704385541	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTGAAATTCCTT	4690	False	NA	NA	False	ATTAAA	-18	NA	69305225	69339916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69307864_69317372_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.32	chr9	+	4467	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	7	478	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGAAGACCCCAAA	4690	False	NA	NA	False	NA	NA	NA	69305225	69340882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.33	chr9	+	4087	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	38	44	7	-44	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4690	False	NA	25	True	AATAAA	-19	NA	69305225	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.34	chr9	+	3868	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	7	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.2534648579998	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4690	False	NA	25	True	AATAAA	-19	NA	69305225	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305265_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.35	chr9	+	1712	9	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-9	2607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.4675092061608	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAGCACAGTGATTT	4694	False	NA	NA	False	AATAAA	-5	NA	69305229	69320067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306237_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483
ES.35484.36	chr9	+	3837	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	42.3416618300535	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4694	False	NA	69	True	AATACA	-21	NA	69305229	69340404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.37	chr9	+	4479	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-9	-44	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.34815214179	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4694	False	NA	25	True	AATAAA	-19	NA	69305229	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305732_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.38	chr9	+	5598	2	NNC	ENSMUSG00000032235.16	novel	610	3	NA	NA	-8	-3429	intron_retention	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4695	False	NA	NA	False	NA	NA	NA	69305230	69311034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69310122_69310327
ES.35484.39	chr9	+	3914	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-7	-44	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	34.3232995046934	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4696	False	NA	25	True	AATAAA	-19	NA	69305231	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335764_69335857_69339322
ES.35484.4	chr9	+	3541	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-486	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTGAAATTCCTTTG	4652	False	NA	NA	False	ATTAAA	-20	NA	69305187	69339918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.41	chr9	+	3250	14	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-6	-491	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.4592606483896	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAACTTGTTGAAATTC	4697	False	NA	NA	False	ATTAAA	-15	NA	69305232	69339913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.42	chr9	+	4416	14	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	18	junction_3	42.4538733326742	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTTGTTGTTCTTTA	4697	False	NA	67	True	AATACA	-19	NA	69305232	69340402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.43	chr9	+	4053	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	4	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.3870270255964	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4707	False	NA	25	True	AATAAA	-19	NA	69305242	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317372_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335635_69335857_69339322
ES.35484.44	chr9	+	5741	13	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	13	85	intron_retention	FALSE	canonical	3	18	junction_10	33.8956732735414	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTGGAGTCTAAAGAA	4716	False	NA	1	True	TATAAA	-12	NA	69305251	69340489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69324392_69332938_69334184_69335597_69335857_69339322
ES.35484.45	chr9	+	3927	15	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	16	-10	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_13	42.0381265238195	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGCAATTTTCTTGTT	4719	False	NA	59	True	AATACA	-11	NA	69305254	69340394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335632_69335857_69339322
ES.35484.46	chr9	+	5326	14	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	27	-49	intron_retention	FALSE	canonical	3	18	junction_11	32.9625931076227	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4730	False	NA	20	True	AATAAA	-14	NA	69305265	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69335857_69339322
ES.35484.47	chr9	+	3903	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	29	-484	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	42.5423188000947	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGAAATTCCTTTGTG	4732	False	NA	NA	False	ATTAAA	-22	NA	69305267	69339920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305782_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.48	chr9	+	4559	16	NNC	ENSMUSG00000032235.16	novel	626	4	NA	NA	139	-44	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.650887391304	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4842	False	NA	25	True	AATAAA	-19	NA	69305377	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305960_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.49	chr9	+	4410	16	NNC	ENSMUSG00000032235.16	novel	626	4	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.8830668951649	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4857	False	NA	69	True	AATACA	-21	NA	69305392	69340404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305782_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.5	chr9	+	3841	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	1	-49	combination_of_known_splicesites	TRUE	canonical	3	18	junction_3	41.2251780605305	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	4653	False	NA	20	True	AATAAA	-14	NA	69305188	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.50	chr9	+	3864	15	NNC	ENSMUSG00000032235.16	novel	626	4	NA	NA	158	-491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	46.9148164229596	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAACTTGTTGAAATTC	4861	False	NA	NA	False	ATTAAA	-15	NA	69305396	69339913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305782_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69335597_69335857_69339322
ES.35484.51	chr9	+	3781	12	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	8371	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.3730946907204	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	173	False	NA	25	True	AATAAA	-19	NA	69314300	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335514_69335857_69339322
ES.35484.52	chr9	+	3226	10	ISM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	12858	49	-5951	-49	3prime_fragment	FALSE	canonical	3	116	junction_8	11.4869759851734	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTTTGTCATTTC	3252	False	NA	20	True	AATAAA	-14	NA	69318045	69340355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.53	chr9	+	7658	6	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	-1282	0	intron_retention	FALSE	canonical	0	0	junction_1	64.4440842901814	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	7921	False	NA	69	True	AATACA	-21	NA	69322714	69340404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69323644_69324028_69324095_69324215_69324392_69328942_69329073_69332938_69333024_69334132
ES.35484.54	chr9	+	5619	2	NNC	ENSMUSG00000032235.16	novel	5475	14	NA	NA	7114	-54	intron_retention	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGAAATGTGTTTGTC	NA	False	NA	15	True	AATAAA	-9	NA	69331268	69340350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69335857_69339319
ES.35484.55	chr9	+	1369	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	76	2	-20	-2	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCGTTGCCTTTGCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	69360977	69399075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ES.35484.56	chr9	+	1113	1	NIC	ENSMUSG00000032231.15	novel	1447	13	NA	NA	-20	-29051	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69360977	69362090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69361000_69362100
ES.35484.58	chr9	+	4712	8	NNC	ENSMUSG00000032231.15	novel	678	9	NA	NA	-19	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	29.9509803594105	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCGTTGCCTTTGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	69360978	69399074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69391142_69392479_69394050_69397235
ES.35484.59	chr9	+	1692	9	ISM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	79	4280	-17	-593	5prime_fragment	FALSE	canonical	3	66	junction_7	9.84568433375761	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGCACTTCTGATATCA	NA	False	NA	NA	False	NA	NA	NA	69360980	69394797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751
ES.35484.6	chr9	+	4020	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATTTTCTTGTTGTTC	4653	False	NA	63	True	AATACA	-15	NA	69305188	69340398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.7	chr9	+	3937	15	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	5	-44	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.5588389305729	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTGTCATTTCAGAAA	4657	False	NA	25	True	AATAAA	-19	NA	69305192	69340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ES.35484.9	chr9	+	4388	27	Fusion	ENSMUSG00000032231.15_ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-9	multi-exon	FALSE	canonical	0	0	junction_15	31.6379528283926	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGAATGCCGTTGCCT	4669	False	NA	NA	False	AATAAA	-16	NA	69305204	69399068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ES.35485.1	chr9	-	3718	2	Antisense	novelGene_ENSMUSG00000032235.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAATAAATCATAATGTG	NA	False	NA	NA	False	NA	NA	NA	69318172	69313931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_69317531_69318053
ES.35485.2	chr9	-	4670	1	Antisense	novelGene_ENSMUSG00000032235.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAAATAAATCATAATGT	NA	False	NA	NA	False	NA	NA	NA	69318602	69313932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_69313900_69318600
ES.35485.3	chr9	-	1985	3	Antisense	novelGene_ENSMUSG00000032235.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAAATAAATCATAATGT	NA	False	NA	NA	False	NA	NA	NA	69318172	69313932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_69315660_69317391_69317531_69318053
ES.35486.1	chr9	+	179	1	Intergenic	novelGene_28873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTTTTTAATTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	69493591	69493770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69493600_69493800
ES.35487.1	chr9	+	160	1	Intergenic	novelGene_28874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCAGAAAGAGAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	69571003	69571163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69571000_69571200
ES.35488.1	chr9	+	171	1	Intergenic	novelGene_28875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69686444	69686615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69686400_69686600
ES.35489.1	chr9	-	1033	1	Intergenic	novelGene_28876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69786071	69785038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_69785000_69786100
ES.3549.1	chr10	-	1762	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	-15	-42	-15	42	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACAGATGTCTGTA	NA	False	NA	24	True	ATTAAA	-42	NA	89568172	89547790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ES.3549.10	chr10	-	4011	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	269	junction_4	22.9803995925245	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568156	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ES.3549.12	chr10	-	2320	9	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	25	junction_8	92.0264058572321	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568159	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89562623_89564015_89564085_89568035
ES.3549.14	chr10	-	6010	7	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	4	-8	intron_retention	FALSE	canonical	3	25	junction_6	104.243971315158	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAATATATCTGTTT	NA	False	NA	-26	True	AATAAA	-13	NA	89568153	89547840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89564085_89568035
ES.3549.15	chr10	-	1328	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	25	352	3	-352	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCCGAGTCATGGCT	NA	False	NA	NA	False	GATAAA	-13	NA	89568132	89548184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ES.3549.16	chr10	-	175	1	Intergenic	novelGene_2713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCAATGTTA	NA	False	NA	NA	False	NA	NA	NA	89559490	89559315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_89559300_89559500
ES.3549.2	chr10	-	3567	4	NNC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	13178	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	130.579052259116	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTTTAATGTTTAT	NA	False	NA	-17	True	AATAAA	-22	NA	89554742	89547831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89548423_89550731_89552020_89552067_89553706_89554692
ES.3549.3	chr10	-	1592	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	4	junction_8	118.774087875333	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568151	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564002_89564085_89568035
ES.3549.4	chr10	-	1732	11	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	4	junction_8	90.3172740952693	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568173	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564002_89564085_89564761_89564880_89568035
ES.3549.5	chr10	-	3832	9	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	269	junction_5	24.8718590981856	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568160	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89564085_89564761_89564880_89568035
ES.3549.6	chr10	-	1757	11	NNC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	117.406814112299	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568166	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560866_89560941_89561032_89561132_89561463_89561521_89561629_89561816_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ES.3549.7	chr10	-	1722	11	NNC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_10	89.6306309249243	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568143	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568002
ES.3549.8	chr10	-	1574	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	95.2864427546726	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568152	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89564015_89564085_89564761_89564880_89568035
ES.3549.9	chr10	-	1580	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	88.0716599363871	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCTGTTTAATGTT	NA	False	NA	-20	True	AATAAA	-19	NA	89568152	89547834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89568035
ES.35490.1	chr9	+	4601	1	Intergenic	novelGene_28877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCACATGTTACATG	NA	False	NA	NA	False	NA	NA	NA	69795187	69799788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69795200_69799800
ES.35491.1	chr9	+	417	1	Intergenic	novelGene_28878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTCTGTTTGGTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	69819527	69819944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69819500_69819900
ES.35492.1	chr9	+	2462	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-101	-33	-63	-29	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGAATTTGTCCAG	NA	False	NA	50	True	NA	NA	NA	69896684	69915570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35492.10	chr9	+	2240	9	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	125.400109649075	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896762	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69910660_69910748_69910850_69910950_69914324
ES.35492.11	chr9	+	2457	11	NNC	ENSMUSG00000011958.18	novel	2464	11	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	128.992247829085	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGGGTCTTAATTACC	NA	False	NA	16	True	AATAAA	-16	NA	69896762	69915536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69905529_69905616_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914324
ES.35492.13	chr9	+	2368	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	34	62	-4	0	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896781	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ES.35492.14	chr9	+	2786	9	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	-4	327	intron_retention	FALSE	canonical	3	219	junction_8	27.3404462289846	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATATATTTTTTATGTT	NA	False	NA	NA	False	AGTAAA	-34	NA	69896781	69914724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
ES.35492.15	chr9	+	2454	12	NIC	ENSMUSG00000011958.18	novel	2464	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	130.837922573966	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896781	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69905529_69905616_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ES.35492.16	chr9	+	4639	15	Fusion	ENSMUSG00000033543.18_ENSMUSG00000011958.18	novel	2464	11	NA	NA	-4	1	multi-exon	FALSE	canonical	2	3	junction_11	256.929008300197	322	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAGTAATACTTGATGC	NA	False	NA	19	True	AATAAA	-17	NA	69896781	69930021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345_69917155_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ES.35492.17	chr9	+	3598	9	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	219	junction_8	27.3404462289846	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896782	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
ES.35492.18	chr9	+	2389	11	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	112.37263901858	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896783	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69905529_69905589_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35492.19	chr9	+	4259	9	NIC	ENSMUSG00000011958.18	novel	2464	11	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	32	junction_8	86.5685241586109	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGCAGGGTCTTAATTA	NA	False	NA	14	True	AATAAA	-14	NA	69896792	69915534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69911624_69914345
ES.35492.2	chr9	+	2272	16	Fusion	ENSMUSG00000033543.18_ENSMUSG00000011958.18	novel	2464	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	248.565877697554	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69896747	69930020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345_69914394_69922204_69922298_69922573_69922693_69924100_69924474_69926670_69926798_69929718
ES.35492.20	chr9	+	1804	11	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.4187622881953	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896798	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345_69914387_69914897
ES.35492.22	chr9	+	10498	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	12	3343	intron_retention	FALSE	canonical	2	2	junction_5	136.214790444366	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGCCTTGTTTTCATC	NA	False	NA	NA	False	AATAAA	-16	NA	69896810	69918942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69904702_69904771_69905529_69905589_69906375_69906553_69908124_69908228_69909261_69910748_69910850
ES.35492.23	chr9	+	5405	8	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	13	0	intron_retention	FALSE	canonical	3	219	junction_7	29.1939328334795	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896811	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
ES.35492.24	chr9	+	6966	9	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	14	3336	intron_retention	FALSE	canonical	3	219	junction_8	27.3404462289846	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACATTCGTGCCTTGT	NA	False	NA	NA	False	AATAAA	-9	NA	69896812	69918935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
ES.35492.25	chr9	+	8146	5	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	62	0	intron_retention	FALSE	canonical	3	5	junction_1	120.831235613975	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69904519	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69904540_69904702_69906553_69908124_69908228_69909261_69910748_69910850
ES.35492.26	chr9	+	4025	6	NNC	ENSMUSG00000033543.18	novel	791	6	NA	NA	-957	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	385.830532747215	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTGAGTAATACTTGA	NA	False	NA	16	True	AATAAA	-14	NA	69918874	69930018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69919052_69919100_69922298_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ES.35492.27	chr9	+	813	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	-48	128	-48	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919783	69930020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ES.35492.28	chr9	+	3230	4	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	729	junction_3	82.0893821798329	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919831	69930020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69919944_69922573_69922693_69924100_69926798_69929718
ES.35492.29	chr9	+	4801	3	NIC	ENSMUSG00000033543.18	novel	659	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	697	junction_1	16	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAGTAATACTTGAT	NA	False	NA	17	True	AATAAA	-15	NA	69919832	69930019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69924206_69926670_69926798_69929718
ES.35492.3	chr9	+	2353	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.3419839104196	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGGGTCTTAATTACC	NA	False	NA	16	True	AATAAA	-16	NA	69896753	69915536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904532_69906373_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35492.30	chr9	+	1023	5	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGTTGTGAGTAATA	NA	False	NA	11	True	AATAAA	-9	NA	69919834	69930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
ES.35492.31	chr9	+	1070	7	FSM	ENSMUSG00000033543.18	ENSMUST00000133881.8	833	7	-14	-223	0	0	multi-exon	FALSE	canonical	3	20	junction_4	372.51159564353	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919835	69930020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69925961_69926101_69926670_69926798_69929718
ES.35492.32	chr9	+	1278	6	NIC	ENSMUSG00000033543.18	novel	888	6	NA	NA	-3	-10	intron_retention	FALSE	canonical	2	6	junction_3	408.528872908635	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTATCTAATATTGAAT	NA	False	NA	NA	False	AATAAA	-24	NA	69919843	69930138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69925961_69926101_69926670_69926798_69929718
ES.35492.33	chr9	+	912	6	NIC	ENSMUSG00000033543.18	novel	833	7	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	366.992098007573	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTGTGAGTAATACTT	NA	False	NA	14	True	AATAAA	-12	NA	69919850	69930016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69926670_69926798_69929718
ES.35492.34	chr9	+	2011	3	FSM	ENSMUSG00000033543.18	ENSMUST00000126120.8	1613	3	0	-398	0	398	multi-exon	FALSE	canonical	3	899	junction_2	4	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAAGTGAGAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	69919852	69925901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69919944_69922573_69922693_69924100
ES.35492.35	chr9	+	599	4	NIC	ENSMUSG00000033543.18	novel	893	5	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	1	18	junction_1	327.8864979769	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGTTGTGAGTAATA	NA	False	NA	11	True	AATAAA	-9	NA	69919871	69930013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_69919944_69924100_69924206_69926670_69926798_69929718
ES.35492.36	chr9	+	833	6	FSM	ENSMUSG00000033543.18	ENSMUST00000140265.8	791	6	-43	1	5	0	multi-exon	FALSE	canonical	3	10	junction_3	407.297728940391	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGAGTAATACTTGAT	NA	False	NA	17	True	AATAAA	-15	NA	69919881	69930019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69924354_69924474_69926670_69926798_69929718
ES.35492.37	chr9	+	4401	2	FSM	ENSMUSG00000033543.18	ENSMUST00000148889.2	769	2	-3631	-1	-395	0	multi-exon	FALSE	canonical	3	729	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69922698	69930020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69926798_69929718
ES.35492.4	chr9	+	1528	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-32	832	6	308	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGACAAAGGAAAGAAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	69896753	69914705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35492.5	chr9	+	3391	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	92.1457514276857	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896756	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910428_69910660_69910748_69910850_69910950_69914345
ES.35492.6	chr9	+	2484	12	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	124.37486658492	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896756	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69904702_69904771_69905529_69905589_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35492.7	chr9	+	3689	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_5	118.617447137561	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896759	69915537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69904702_69904771_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
ES.35492.8	chr9	+	2369	10	NNC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_9	87.4795214131094	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGCAGGGTCTTAATT	NA	False	NA	13	True	AATAAA	-13	NA	69896761	69915533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914324
ES.35492.9	chr9	+	5756	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	-23	-3405	15	3343	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGCCTTGTTTTCATC	NA	False	NA	NA	False	AATAAA	-16	NA	69896762	69918942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ES.35493.1	chr9	-	201	1	Intergenic	novelGene_28879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTTAACATTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	69931340	69931139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_69931100_69931300
ES.35494.1	chr9	+	171	1	Intergenic	novelGene_28880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGGTTGTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	69933232	69933403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69933200_69933400
ES.35495.1	chr9	+	164	1	Intergenic	novelGene_28881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAGTTATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	69935511	69935675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_69935500_69935700
ES.35496.1	chr9	-	3797	3	NNC	ENSMUSG00000032226.6	novel	4301	3	NA	NA	-2612	-569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTGGGTGGATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	69947982	69939346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69942621_69943914_69944257_69947801
ES.35496.2	chr9	-	2243	2	ISM	ENSMUSG00000032226.6	ENSMUST00000034751.6	4301	3	1007	2049	1007	-2049	3prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCTGCCCCTCCAGTG	NA	False	NA	NA	False	CATAAA	-14	NA	69944363	69940826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_69942621_69943914
ES.35497.1	chr9	-	1297	1	Intergenic	novelGene_28882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCGATTTGTTTGCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69956909	69955612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_69955600_69956900
ES.35498.1	chr9	+	3819	1	FSM	ENSMUSG00000111176.2	ENSMUST00000217561.2	2168	1	-2004	353	-2004	-353	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	69975144	69978963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_69975100_69979000
ES.35499.1	chr9	+	2343	1	Antisense	novelGene_ENSMUSG00000032224.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCATATAGACAACAAAAAT	5735	False	NA	NA	False	NA	NA	NA	69995238	69997581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_69995200_69997600
ES.355.1	chr1	-	309	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTAAAAAAGAATGTT	9687	False	NA	NA	False	NA	NA	NA	39557933	39557624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39557600_39557900
ES.355.2	chr1	-	175	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGAGTGAGCAGGAAC	9687	False	NA	NA	False	NA	NA	NA	39557933	39557758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39557800_39557900
ES.3550.1	chr10	+	184	1	Intergenic	novelGene_2714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	89571513	89571697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_89571500_89571700
ES.35500.1	chr9	-	2929	10	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	8	10672	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.4398876899856	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTTTCTGACCTGTGG	NA	False	NA	NA	False	NA	NA	NA	70048852	69985120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69985154_69996591_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.10	chr9	-	3605	9	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	85	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	72.4231273489346	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTGTGGCATGGGAC	NA	False	NA	-23	True	AATAAA	-16	NA	70048775	69995795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000782_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.11	chr9	-	3004	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-96	795	-96	-795	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTTACTGTTGACCCA	NA	False	NA	-15	True	AATAAA	-19	NA	70048956	69996587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.12	chr9	-	2788	10	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	154	-799	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	89.1712182985043	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGCTCTTACTGTTGA	NA	False	NA	-19	True	AATAAA	-15	NA	70048706	69996591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70037925_70037964_70048594
ES.35500.13	chr9	-	2496	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-2	1209	-2	-1209	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCATCCTAATGA	NA	False	NA	95	True	NA	NA	NA	70048862	69997001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.14	chr9	-	2300	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	65	1338	65	-1338	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGCCTTGGTTTTT	NA	False	NA	-34	True	NA	NA	NA	70048795	69997130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.15	chr9	-	5182	8	NIC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	84	-1338	intron_retention	FALSE	canonical	3	198	junction_1	15.5838744494796	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGCCTTGGTTTTT	NA	False	NA	-34	True	NA	NA	NA	70048776	69997130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_69998174_70000772_70000966_70003332_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.16	chr9	-	2313	9	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	-990	-1340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.8962233246689	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATCTTGTGCCTTGGTTT	NA	False	NA	-36	True	NA	NA	NA	70050832	69997132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70050616
ES.35500.17	chr9	-	1911	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-88	1880	-88	-1880	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGCCCCTCACCCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	70048948	69997672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.18	chr9	-	4650	8	NIC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	67	-1887	intron_retention	FALSE	canonical	3	198	junction_1	15.5838744494796	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTATGTATTGCCCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	70048793	69997679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_69998174_70000772_70000966_70003332_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.19	chr9	-	1641	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	7	2055	7	-2055	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCTAAGTGCAGTTGA	NA	False	NA	-10	True	AATACA	-15	NA	70048853	69997847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.2	chr9	-	3645	10	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	87	10672	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	70.4398876899856	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTTTCTGACCTGTGG	NA	False	NA	NA	False	NA	NA	NA	70048773	69985120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69985148_69995790_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.20	chr9	-	1492	9	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	151	-2055	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.8962233246689	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCTAAGTGCAGTTGA	NA	False	NA	-10	True	AATACA	-15	NA	70048709	69997847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033557_70048590
ES.35500.21	chr9	-	2837	3	ISM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	10	34203	10	2251	5prime_fragment	FALSE	canonical	3	239	junction_2	2.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCTTTGCCTTGTCTCT	NA	False	NA	NA	False	TTTAAA	-7	NA	70048850	70029995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_70032480_70033468_70033566_70048594
ES.35500.22	chr9	-	2053	4	NNC	ENSMUSG00000032224.16	novel	478	3	NA	NA	-25	2246	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	110.563204648844	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGATGCTTTGCCTTG	NA	False	NA	NA	False	TTTAAA	-2	NA	70048885	70030000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70031392_70032205_70032480_70033468_70033566_70048594
ES.35500.23	chr9	-	3725	3	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	-7	2242	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	117	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAAGGATGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	70048867	70030004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70033360_70033468_70033566_70048594
ES.35500.3	chr9	-	730	1	Intergenic	novelGene_28883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69994715	69993985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_69994000_69994700
ES.35500.4	chr9	-	3808	10	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	-43	24	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	89.1712182985043	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGAAGAATCTTTGAGTGT	NA	False	NA	4	True	AATAAA	-43	NA	70048903	69995768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70037925_70037964_70048594
ES.35500.5	chr9	-	3768	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	-49	-16	-49	16	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAATGCGAAGAATCT	NA	False	NA	-4	True	AATAAA	-35	NA	70048909	69995776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35500.8	chr9	-	3725	9	NNC	ENSMUSG00000032224.16	novel	3703	9	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	73.8798644760533	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGTGTGGCATGGGAC	NA	False	NA	-23	True	AATAAA	-16	NA	70048879	69995795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_69998174_70000772_70000966_70003332_70003475_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ES.35501.1	chr9	+	132	1	Intergenic	novelGene_28884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	70061461	70061593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70061500_70061600
ES.35502.1	chr9	-	2459	1	Intergenic	novelGene_28885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70092922	70090463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70090500_70092900
ES.35503.1	chr9	+	5405	3	Intergenic	novelGene_28887	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAACTCTCTCCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	70098575	70104778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70101286_70101873_70102847_70103056
ES.35503.2	chr9	+	3833	2	Intergenic	novelGene_28888	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70100716	70104757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70102854_70103061
ES.35504.1	chr9	-	5485	1	Intergenic	novelGene_28886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGATTTGCCTCCAG	3662	False	NA	NA	False	NA	NA	NA	70099467	70093982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70094000_70099500
ES.35505.1	chr9	-	1158	1	Intergenic	novelGene_28889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	70104756	70103598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70103600_70104800
ES.35506.1	chr9	+	4543	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	-1239	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.3370034028609	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70113392	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70113458_70114796_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.10	chr9	+	5198	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-18	-555	0	555	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGATGAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	70114631	70307603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.12	chr9	+	6108	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.5452525196503	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70243837_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70297186_70297413_70303057_70303228_70306003
ES.35506.13	chr9	+	6815	27	NIC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	intron_retention	FALSE	canonical	3	179	junction_8	20.7693732188847	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.14	chr9	+	4405	26	NIC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.9695050005852	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70114986_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.15	chr9	+	6199	27	NIC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	intron_retention	FALSE	canonical	3	179	junction_9	20.7777760198574	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.16	chr9	+	4839	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	69.8987117476285	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204341_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275947_70276121_70277638_70277785_70283795_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.17	chr9	+	5078	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	45.9983896658552	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114633	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229236_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.18	chr9	+	5006	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1043158581607	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114633	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70147326_70147692_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.19	chr9	+	4501	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.8499969707984	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114848_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.2	chr9	+	4897	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	-269	-3	-251	3	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTTCATGACATTT	NA	False	NA	23	True	AATAAA	-23	NA	70114380	70307051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.20	chr9	+	4520	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.1688913608769	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114633	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242475_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.22	chr9	+	3559	18	FSM	ENSMUSG00000032220.11	ENSMUST00000214767.2	2671	18	2	-890	2	890	multi-exon	FALSE	canonical	3	179	junction_9	19.1157465118651	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTCTGGGGAGTTGT	NA	False	NA	NA	False	TTTAAA	-33	NA	70114633	70267971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566
ES.35506.23	chr9	+	4636	25	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	-6	-19709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	48.4423877462244	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	70114637	70287339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250581_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002
ES.35506.24	chr9	+	4614	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.1678217383099	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCCTTGTTTCTTCAT	NA	False	NA	16	True	AATAAA	-16	NA	70114647	70307044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232123_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.25	chr9	+	4719	29	NNC	ENSMUSG00000032220.11	novel	1260	4	NA	NA	40624	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.5879023984306	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70155273	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70155384_70167442_70167763_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.26	chr9	+	4381	28	NNC	ENSMUSG00000032220.11	novel	1260	4	NA	NA	40639	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.8499969707984	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCTTGTTTCTTCATG	NA	False	NA	17	True	AATAAA	-17	NA	70155288	70307045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70155384_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.27	chr9	+	4375	28	NNC	ENSMUSG00000032220.11	novel	1260	4	NA	NA	76006	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.8499969707984	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70190655	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70190742_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.28	chr9	+	4295	27	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	79536	2	79536	-2	3prime_fragment	FALSE	canonical	3	179	junction_8	20.398290043197	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70194185	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.29	chr9	+	4033	24	NNC	ENSMUSG00000032220.11	novel	2671	18	NA	NA	111759	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.5786249057296	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	5327	False	NA	18	True	AATAAA	-18	NA	70226408	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70226572_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.3	chr9	+	4668	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.168178281919	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114592	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209055_70223870_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.30	chr9	+	3872	23	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	112699	2	112699	-2	3prime_fragment	FALSE	canonical	3	179	junction_4	20.8412436772984	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	6267	False	NA	18	True	AATAAA	-18	NA	70227348	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.31	chr9	+	4657	21	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	116453	5	116453	-5	3prime_fragment	FALSE	canonical	3	179	junction_2	21.832258243251	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATGCCTTGTTTCTTCA	NA	False	NA	15	True	AATAAA	-15	NA	70231102	70307043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.32	chr9	+	1957	7	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	162987	3	162987	-3	3prime_fragment	FALSE	canonical	3	214	junction_4	19.2527054375915	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCTTGTTTCTTCATG	1736	False	NA	17	True	AATAAA	-17	NA	70277636	70307045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.33	chr9	+	3285	3	NIC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	163052	-19709	intron_retention	FALSE	canonical	3	235	junction_2	19	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	1801	False	NA	NA	False	NA	NA	NA	70277701	70287339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70277785_70283785_70285651_70286002
ES.35506.34	chr9	+	6372	1	NIC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	166318	-19709	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	5067	False	NA	NA	False	NA	NA	NA	70280967	70287339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70281000_70287300
ES.35506.35	chr9	+	4577	1	NIC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	175958	-11864	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9257	False	NA	NA	False	NA	NA	NA	70290607	70295184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70290600_70295200
ES.35506.36	chr9	+	3810	2	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	185813	0	185813	0	3prime_fragment	FALSE	canonical	3	230	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	2175	False	NA	20	True	AATAAA	-20	NA	70300462	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70303228_70306003
ES.35506.37	chr9	+	2251	1	NIC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	188017	-2131	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4379	False	NA	NA	False	NA	NA	NA	70302666	70304917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70302700_70304900
ES.35506.4	chr9	+	4895	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	59.6673067935867	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114605	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70297186_70297413_70303057_70303228_70306003
ES.35506.5	chr9	+	4649	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	59.8168974829838	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCTTGTTTCTTCATG	NA	False	NA	17	True	AATAAA	-17	NA	70114621	70307045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260630_70261533_70261552_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.6	chr9	+	4510	27	NIC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	46.8734447473749	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTTTCTTCATGA	NA	False	NA	18	True	AATAAA	-18	NA	70114630	70307046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35506.7	chr9	+	4768	29	NNC	ENSMUSG00000032220.11	novel	4699	29	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	70.5196726785787	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCCTTGTTTCTTCAT	NA	False	NA	16	True	AATAAA	-16	NA	70114631	70307044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291089_70291288_70297186_70297320_70303057_70303228_70306003
ES.35506.9	chr9	+	4626	28	NNC	ENSMUSG00000032220.11	novel	4625	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	46.0241482509152	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114631	70307048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275967_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ES.35507.1	chr9	+	7759	1	Antisense	novelGene_ENSMUSG00000032218.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGGACAATGAAG	2321	False	NA	NA	False	NA	NA	NA	70316554	70324313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_70316600_70324300
ES.35507.2	chr9	+	175	1	Intergenic	novelGene_28892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAAAGAAGA	2326	False	NA	5	True	NA	NA	NA	70323955	70324130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70324000_70324100
ES.35508.1	chr9	+	4241	1	Intergenic	novelGene_28894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	6570	False	NA	NA	False	NA	NA	NA	70376982	70381223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70377000_70381200
ES.35509.1	chr9	+	6952	1	Intergenic	novelGene_28895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACATTCACGAGTCCATA	NA	False	NA	NA	False	NA	NA	NA	70388877	70395829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70388900_70395800
ES.3551.1	chr10	+	6474	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	-4	-22	-4	22	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTCTTTTTTCTTCA	NA	False	NA	43	True	AATATA	-19	NA	89580848	89655755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.10	chr10	+	6136	19	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	9	341	intron_retention	FALSE	canonical	2	7	junction_11	31.1230631803554	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTTATCTTGCGATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	89580861	89654605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.11	chr10	+	7926	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	13	-1491	13	1491	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGTGTCATCCTTGCGT	NA	False	NA	NA	False	NA	NA	NA	89580865	89657224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.12	chr10	+	6094	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	162	intron_retention	FALSE	canonical	3	116	junction_11	11.7109698319325	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580866	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.13	chr10	+	6630	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.4347456876615	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580866	89655731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591417_89591888_89591953_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.14	chr10	+	5102	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	14	152	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	30.3006188055624	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAAACTCTTGACCC	NA	False	NA	NA	False	AATAAA	-22	NA	89580866	89654416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.15	chr10	+	5053	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	150	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	45.4467820643002	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGGAAAACTCTTGAC	NA	False	NA	NA	False	AATAAA	-20	NA	89580868	89654414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.16	chr10	+	5889	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	716	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	44.6262717715855	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAGGTTTTTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	89580868	89654980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89588181_89588258_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.17	chr10	+	7257	19	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	0	intron_retention	FALSE	canonical	2	7	junction_11	31.1230631803554	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580868	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.18	chr10	+	8129	22	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	1635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.3297631522721	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGGTAAATCTCTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	89580868	89657368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89621187_89621250_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.19	chr10	+	2293	14	ISM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	16	14848	16	21	5prime_fragment	FALSE	canonical	3	116	junction_11	11.951578836555	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTGCTGCCACCGA	NA	False	NA	NA	False	AATAAA	-10	NA	89580868	89640885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573
ES.3551.2	chr10	+	5702	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	1	745	1	724	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTTGAAGACAGTATAT	NA	False	NA	NA	False	AATAAA	-24	NA	89580853	89654988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.20	chr10	+	5525	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	719	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	40.9007988462376	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGTTTTTGAAGACAG	NA	False	NA	NA	False	AATAAA	-19	NA	89580868	89654983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.21	chr10	+	4734	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	16	1698	16	-9	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTCCAAACCCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	89580868	89654035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.22	chr10	+	6537	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	16	-14	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	44.0157671193181	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGCATTCAATATACT	NA	False	NA	7	True	TATAAA	-18	NA	89580868	89655719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.23	chr10	+	6621	22	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	40.2886411184915	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580870	89655731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645017_89645211_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.24	chr10	+	5302	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	18	143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.4347456876615	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTTTACAAATGGAAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	89580870	89654407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591417_89591888_89591953_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.25	chr10	+	5668	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	19	716	combination_of_known_junctions	FALSE	canonical	2	7	junction_12	45.033209967756	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAGGTTTTTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	89580871	89654980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.26	chr10	+	8058	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	19	-1629	19	1629	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTTGGGTAAATC	NA	False	NA	NA	False	AATAAA	-15	NA	89580871	89657362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.27	chr10	+	6701	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	45.4347456876615	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATATACTTTGTCCGAT	NA	False	NA	16	True	TATAAA	-27	NA	89580871	89655728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591417_89601082_89601226_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.28	chr10	+	4969	20	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	19	162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5894927931818	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580871	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591339_89611807_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.29	chr10	+	4975	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	19	1454	19	15	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTTAGGGCTAATGT	NA	False	NA	NA	False	NA	NA	NA	89580871	89654279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.3	chr10	+	9645	19	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	3	716	intron_retention	FALSE	canonical	1	3	junction_15	31.8102010193097	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAGGTTTTTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	89580855	89654980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.30	chr10	+	5148	20	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	19	341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5894927931818	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTTATCTTGCGATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	89580871	89654605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591339_89611807_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.31	chr10	+	5320	21	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	20	359	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.1046620299916	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCGGTATTTGTAACT	NA	False	NA	NA	False	ATTAAA	-41	NA	89580872	89654623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625246_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.32	chr10	+	6412	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	30.3006188055624	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580873	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.33	chr10	+	8195	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	21	1634	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGGTAAATCTCTAG	NA	False	NA	NA	False	AATAAA	-20	NA	89580873	89657367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.34	chr10	+	6647	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	21	722	intron_retention	FALSE	canonical	3	116	junction_11	11.7109698319325	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTTTTGAAGACAGTAT	NA	False	NA	NA	False	AATAAA	-22	NA	89580873	89654986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.35	chr10	+	7065	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	21	-638	21	638	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAGAAAAAAAAAGAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	89580873	89656371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.36	chr10	+	5330	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	21	162	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	44.6262717715855	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580873	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89588181_89588258_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.4	chr10	+	6583	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCGATTGGTTTTTC	NA	False	NA	25	True	TATAAA	-36	NA	89580855	89655737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.40	chr10	+	4962	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	162	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	40.9007988462376	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580874	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.42	chr10	+	6636	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	44.6262717715855	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580874	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89588181_89588258_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.43	chr10	+	2153	3	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCGATTGGTTTTTCC	NA	False	NA	26	True	TATAAA	-37	NA	89580874	89655738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581053_89652050_89652084_89653796
ES.3551.44	chr10	+	5240	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	149	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATGGAAAACTCTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	89580874	89654413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.46	chr10	+	9667	21	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	22	722	intron_retention	TRUE	canonical	0	0	junction_19	41.42535455491	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTTTTGAAGACAGTAT	NA	False	NA	NA	False	AATAAA	-22	NA	89580874	89654986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89648503_89648680_89649056_89652084_89653796
ES.3551.48	chr10	+	5362	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	24	549	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTGATGTATGTCTG	NA	False	NA	NA	False	TATAAA	-16	NA	89580876	89654813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.49	chr10	+	6693	24	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.3884351439178	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580876	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89588186_89588258_89591282_89591417_89591888_89591953_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.5	chr10	+	6302	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580856	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.50	chr10	+	6268	20	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5894927931818	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580877	89655731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89591282_89591339_89611807_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.52	chr10	+	7372	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	25	-18	intron_retention	FALSE	canonical	3	116	junction_11	11.7109698319325	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCTGAGCATTCAATA	NA	False	NA	3	True	TATAAA	-14	NA	89580877	89655715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.53	chr10	+	5282	21	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	25	162	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	38.6671372097806	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580877	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644704_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.54	chr10	+	9683	23	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	52.6920728900899	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89580880	89655731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89631966_89632211_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89648503_89648680_89649056_89652084_89653796
ES.3551.56	chr10	+	1991	7	ISM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	28	36206	28	1405	5prime_fragment	FALSE	canonical	3	120	junction_1	10.040196987886	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACTTGTAAAATTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	89580880	89619527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431
ES.3551.57	chr10	+	6279	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	31.6314475870817	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580880	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.58	chr10	+	5356	22	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	45	341	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	40.3684279768765	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGTTATCTTGCGATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	89580897	89654605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630410_89636436_89636595_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.59	chr10	+	4841	21	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	-49	-46	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	30.3006188055624	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTGAATTTATTTCTC	NA	False	NA	NA	False	AAGAAA	-26	NA	89580929	89654218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.6	chr10	+	5134	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	7	1307	7	162	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGACCCTACCGAACTT	NA	False	NA	NA	False	AATAAA	-32	NA	89580859	89654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.60	chr10	+	4843	15	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	-4517	719	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	32.8811247883484	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGTTTTTGAAGACAG	NA	False	NA	NA	False	AATAAA	-19	NA	89618544	89654983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644704_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.61	chr10	+	5000	12	NNC	ENSMUSG00000019951.11	novel	1154	7	NA	NA	5062	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.6934570649765	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCCGATTGGTTTT	NA	False	NA	23	True	TATAAA	-34	NA	89628123	89655735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89628189_89630344_89630487_89634101_89634248_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.62	chr10	+	4773	10	ISM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	49488	18	7279	-18	3prime_fragment	FALSE	canonical	3	117	junction_1	10.8570964447165	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCTGAGCATTCAATA	NA	False	NA	3	True	TATAAA	-14	NA	89630340	89655715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.63	chr10	+	4869	10	NNC	ENSMUSG00000019951.11	novel	1154	7	NA	NA	-1907	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.8299278465175	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89636551	89655733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89636595_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644704_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.64	chr10	+	6695	10	NNC	ENSMUSG00000019951.11	novel	1154	7	NA	NA	-1859	-14	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.7315532644971	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGCATTCAATATACT	NA	False	NA	7	True	TATAAA	-18	NA	89636599	89655719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89637659_89637860_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645626_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.65	chr10	+	181	1	Intergenic	novelGene_2716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	89637659	89637840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_89637700_89637800
ES.3551.66	chr10	+	5181	8	ISM	ENSMUSG00000019951.11	ENSMUST00000218776.2	4615	12	15497	-716	100	716	3prime_fragment	FALSE	canonical	3	122	junction_6	9.78336781043653	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACAGGTTTTTGAAGA	NA	False	NA	NA	False	AATAAA	-16	NA	89638558	89654980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_89639075_89640573_89642076_89642485_89642659_89644379_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.67	chr10	+	5196	2	ISM	ENSMUSG00000019951.11	ENSMUST00000219819.2	716	4	1090	-1581	1090	-2	3prime_fragment	FALSE	canonical	3	150	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACTTTGTCCGATTGG	NA	False	NA	19	True	TATAAA	-30	NA	89648822	89655731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_89652084_89653796
ES.3551.7	chr10	+	1949	12	NNC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	9	10158	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	38.4340155815003	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATCATTTATACGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	89580861	89628280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89627983
ES.3551.8	chr10	+	5828	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	9	724	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTTGAAGACAGTATAT	NA	False	NA	NA	False	AATAAA	-24	NA	89580861	89654988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.3551.9	chr10	+	4872	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	9	-12	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCTGTTCCAAACCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	89580861	89654032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ES.35510.1	chr9	+	178	1	Intergenic	novelGene_28896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGGGGATGGCTACA	7656	False	NA	NA	False	NA	NA	NA	70397408	70397586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70397400_70397600
ES.35510.2	chr9	+	281	1	Intergenic	novelGene_28897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATGTAAATGAAG	7656	False	NA	NA	False	NA	NA	NA	70397408	70397689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70397400_70397700
ES.35511.1	chr9	+	1472	1	Intergenic	novelGene_28898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTAAGAAGTAAAAAGAGC	9007	False	NA	NA	False	NA	NA	NA	70398759	70400231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70398800_70400200
ES.35512.1	chr9	-	176	1	Intergenic	novelGene_28890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAACTCCAGG	969	False	NA	NA	False	NA	NA	NA	70196505	70196329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70196300_70196500
ES.35513.1	chr9	-	2887	1	Intergenic	novelGene_28891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCACTCACTTGACC	9728	False	NA	NA	False	NA	NA	NA	70207661	70204774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70204800_70207700
ES.35514.1	chr9	-	4055	16	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-35	27043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.37485894765	912	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCAGGTGGTCGTGGTG	2211	False	NA	NA	False	NA	NA	NA	70411042	70305662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70305676_70333168_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
ES.35514.10	chr9	-	6798	2	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	6665	0	intron_retention	FALSE	canonical	3	1386	junction_1	0	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70322164	70314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70317544_70317936
ES.35514.103	chr9	-	4267	15	FSM	ENSMUSG00000032217.14	ENSMUST00000215848.2	4712	15	-14	459	10	-458	multi-exon	FALSE	canonical	2	7	junction_14	91.6561898774826	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCTTGTTTTATTT	2603	False	NA	-2	True	AATAAA	-14	NA	70410650	70333169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410513
ES.35514.105	chr9	-	4352	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-24	-458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	92.2538304395499	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCTTGTTTTATTT	2222	False	NA	-2	True	AATAAA	-14	NA	70411031	70333169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366277_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.106	chr9	-	4180	13	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-41	-458	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	95.317415629161	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCTTGTTTTATTT	2205	False	NA	-2	True	AATAAA	-14	NA	70411048	70333169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.108	chr9	-	4492	4	ISM	ENSMUSG00000032217.14	ENSMUST00000213208.2	3293	9	18949	465	-4858	-459	3prime_fragment	FALSE	canonical	3	217	junction_2	47.5137407026173	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTCTTGTTTTATT	NA	False	NA	-3	True	AATAAA	-13	NA	70342291	70333170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218
ES.35514.11	chr9	-	1429	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	470.774079973611	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328842	70314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318059_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.111	chr9	-	4423	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-70	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	112.721576666377	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTCTTGTTTTATT	2176	False	NA	-3	True	AATAAA	-13	NA	70411077	70333170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365112_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.112	chr9	-	4135	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	-459	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	86.709843378797	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTCTTGTTTTATT	2233	False	NA	-3	True	AATAAA	-13	NA	70411020	70333170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383321_70383531_70383951_70410740
ES.35514.113	chr9	-	3618	12	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-9	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	96.2737144768683	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTCTTGTTTTATT	2237	False	NA	-3	True	AATAAA	-13	NA	70411016	70333170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357608_70366267_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.114	chr9	-	4014	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-9	-459	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	98.8935987693391	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTCTTGTTTTATT	2237	False	NA	-3	True	AATAAA	-13	NA	70411016	70333170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
ES.35514.117	chr9	-	4384	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	58	-460	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	107.834150813333	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGTCTCTTGTTTTAT	2305	False	NA	-4	True	AATAAA	-12	NA	70410948	70333171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.12	chr9	-	1543	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	471.816552671693	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328828	70314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315325_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.120	chr9	-	3103	12	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	-463	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	108.070989830644	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTACATGTCTCTTGTTT	2233	False	NA	-7	True	AATAAA	-9	NA	70411020	70333174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70360916_70383689_70383951_70410221_70410285_70410740
ES.35514.121	chr9	-	3884	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	1	611	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	96.630925248006	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATATGGAATTCTGAGT	2248	False	NA	NA	False	ATTAAA	-27	NA	70411005	70333707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.122	chr9	-	3838	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-29	600	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	77.5959798873276	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTATATTTACAATATG	2217	False	NA	NA	False	ATTAAA	-16	NA	70411036	70333718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.123	chr9	-	3845	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	598	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	90.4619309253653	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTGTATATTTACAATA	2211	False	NA	NA	False	ATTAAA	-14	NA	70411042	70333720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.124	chr9	-	3887	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-19	1012	-19	596	multi-exon	FALSE	canonical	3	68	junction_2	86.8932021013645	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGCTGTATATTTACAA	2227	False	NA	NA	False	ATTAAA	-12	NA	70411026	70333722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.125	chr9	-	3890	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-46	596	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGCTGTATATTTACAA	2200	False	NA	NA	False	ATTAAA	-12	NA	70411053	70333722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.126	chr9	-	3873	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-92	596	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGCTGTATATTTACAA	2154	False	NA	NA	False	ATTAAA	-12	NA	70411099	70333722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.128	chr9	-	3446	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-9	252	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGACATTACTTCCTG	2237	False	NA	NA	False	TATAAA	-17	NA	70411016	70334066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.129	chr9	-	3516	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	252	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGACATTACTTCCTG	2227	False	NA	NA	False	TATAAA	-17	NA	70411026	70334066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.13	chr9	-	5766	7	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	1324	junction_2	57.7477753299255	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328827	70314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282
ES.35514.131	chr9	-	3208	8	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-49	-3121	combination_of_known_junctions	FALSE	canonical	3	170	junction_2	58.2601484546614	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAAACCTTTCTCGTG	2197	False	NA	NA	False	ATTAAA	-26	NA	70411056	70350092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.133	chr9	-	4486	9	NNC	ENSMUSG00000032217.14	novel	3555	5	NA	NA	-17	8053	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	100.059903932594	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCAGAGTCTTAATT	2229	False	NA	NA	False	AATAAA	-27	NA	70411024	70355142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70356090_70356324_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.134	chr9	-	4425	9	NNC	ENSMUSG00000032217.14	novel	3555	5	NA	NA	-19	8047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.306689387264	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTTGAGTCAGAGTC	2227	False	NA	NA	False	AATAAA	-21	NA	70411026	70355148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70356100_70356337_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410264_70410776
ES.35514.135	chr9	-	3427	8	ISM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-35	23747	-35	6738	5prime_fragment	FALSE	canonical	3	128	junction_7	70.7652053322414	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTTATCTTTATCATA	2211	False	NA	NA	False	AATAAA	-22	NA	70411042	70356457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.14	chr9	-	1504	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	594.631385292603	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328804	70314973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320561_70326075_70326190_70326282_70326404_70328698
ES.35514.16	chr9	-	4215	7	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	1334	junction_1	68.6013038424846	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGTATCCTGTGTAT	NA	False	NA	-10	True	AATAAA	-12	NA	70328835	70314975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.17	chr9	-	1635	8	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	1324	junction_2	62.4927750926098	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGTATCCTGTGTAT	NA	False	NA	-10	True	AATAAA	-12	NA	70328834	70314975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.18	chr9	-	4804	6	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	25	-3	intron_retention	FALSE	canonical	3	1324	junction_1	67.5680397821337	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAGGTATCCTGTGTA	NA	False	NA	-11	True	AATAAA	-11	NA	70328804	70314976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70316673_70317402_70317544_70317936_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.19	chr9	-	1465	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-30	96	-30	-96	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGTATGTTTGTATA	NA	False	NA	-1	True	AATAAA	-21	NA	70328859	70315069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.2	chr9	-	1576	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	-38	-7	-38	7	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGTGTATATTTGTATA	NA	False	NA	-1	True	AATAAA	-21	NA	70328867	70314966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.20	chr9	-	4822	23	Fusion	ENSMUSG00000032217.14_ENSMUSG00000032218.8	novel	4880	15	NA	NA	-94	-97	multi-exon	FALSE	canonical	1	9	junction_8	537.657353480882	912	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGTATGTTTGTAT	2152	False	NA	-2	True	AATAAA	-20	NA	70411101	70315070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70334141_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.21	chr9	-	3386	7	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	26	-99	intron_retention	FALSE	canonical	3	1377	junction_2	60.7426264386606	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTGTGTATGTTTGT	NA	False	NA	-4	True	AATAAA	-18	NA	70328803	70315072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.22	chr9	-	3390	8	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-8	-99	intron_retention	FALSE	canonical	3	1324	junction_2	72.3181745299682	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTGTGTATGTTTGT	NA	False	NA	-4	True	AATAAA	-18	NA	70328837	70315072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.23	chr9	-	1450	10	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	27	-99	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	577.797734698071	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTGTGTATGTTTGT	NA	False	NA	-4	True	AATAAA	-18	NA	70328802	70315072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326404_70328439_70328493_70328698
ES.35514.25	chr9	-	1163	7	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	24	-101	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	518.907720333994	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTATCCTGTGTATGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	70328805	70315074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70328698
ES.35514.26	chr9	-	150	1	Intergenic	novelGene_28893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	70330482	70330332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70330300_70330500
ES.35514.27	chr9	-	5063	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-117	85	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGGTGCTTATATTCA	2129	False	NA	72	True	NA	NA	NA	70411124	70332620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.3	chr9	-	3454	8	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	25	6	intron_retention	FALSE	canonical	3	41	junction_7	474.664005763389	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTGTATATTTGTAT	NA	False	NA	-2	True	AATAAA	-20	NA	70328804	70314967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326404_70328698
ES.35514.30	chr9	-	2034	5	NNC	ENSMUSG00000032217.14	novel	3293	9	NA	NA	-10682	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	127.89913017687	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	NA	False	NA	-13	True	AATAAA	-21	NA	70348115	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348058
ES.35514.31	chr9	-	4901	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	96.1358520054632	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2200	False	NA	-13	True	AATAAA	-21	NA	70411053	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348158_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.32	chr9	-	4878	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	104.741439892572	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2214	False	NA	-13	True	AATAAA	-21	NA	70411039	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.33	chr9	-	4910	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2134	False	NA	-13	True	AATAAA	-21	NA	70411119	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.34	chr9	-	4950	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-65	-5	-65	0	multi-exon	FALSE	canonical	3	68	junction_2	86.8932021013645	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2181	False	NA	-13	True	AATAAA	-21	NA	70411072	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.37	chr9	-	5868	13	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-66	0	intron_retention	FALSE	canonical	3	170	junction_7	57.4975844903264	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2180	False	NA	-13	True	AATAAA	-21	NA	70411073	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.39	chr9	-	4917	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_6	107.834150813333	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2238	False	NA	-13	True	AATAAA	-21	NA	70411015	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.4	chr9	-	3506	8	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-19	6	intron_retention	FALSE	canonical	3	1324	junction_2	72.3181745299682	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTGTATATTTGTAT	NA	False	NA	-2	True	AATAAA	-20	NA	70328848	70314967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.41	chr9	-	4902	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2163	False	NA	-13	True	AATAAA	-21	NA	70411090	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.43	chr9	-	4544	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	92.6976926477796	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2211	False	NA	-13	True	AATAAA	-21	NA	70411042	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410221_70410285_70410740
ES.35514.44	chr9	-	4943	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-118	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	90.4619309253653	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2128	False	NA	-13	True	AATAAA	-21	NA	70411125	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.45	chr9	-	4495	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	86.1012692788473	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	2197	False	NA	-13	True	AATAAA	-21	NA	70411056	70332705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
ES.35514.5	chr9	-	4734	7	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	1	4	intron_retention	FALSE	canonical	3	1324	junction_1	70.8247053568802	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCCTGTGTATATTTGT	NA	False	NA	-4	True	AATAAA	-18	NA	70328828	70314969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.51	chr9	-	4505	13	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-22712	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.196082017954	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	NA	False	NA	-15	True	AATAAA	-19	NA	70383952	70332707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376714_70383057
ES.35514.53	chr9	-	4602	15	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	88.4858169195401	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGTTTCATAATTAG	2226	False	NA	-15	True	AATAAA	-19	NA	70411027	70332707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383321_70383531_70383951_70410740
ES.35514.56	chr9	-	5011	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	122.767639601539	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2210	False	NA	-18	True	AATAAA	-16	NA	70411043	70332710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70404867_70404960_70410221_70410285_70410740
ES.35514.59	chr9	-	5448	14	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	15	junction_12	89.2011887309015	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2242	False	NA	-19	True	AATAAA	-15	NA	70411011	70332711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
ES.35514.6	chr9	-	1533	9	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	448.011840663838	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATCCTGTGTATATTT	NA	False	NA	-6	True	AATAAA	-16	NA	70328837	70314971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326404_70328698
ES.35514.60	chr9	-	4862	14	NNC	ENSMUSG00000032217.14	novel	4735	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	102.081299540985	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2615	False	NA	-20	True	AATAAA	-14	NA	70410638	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410324
ES.35514.61	chr9	-	4753	14	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	94.1074546343247	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2254	False	NA	-20	True	AATAAA	-14	NA	70410999	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366409_70376636_70376764_70383057_70383951_70410740
ES.35514.62	chr9	-	4730	15	NIC	ENSMUSG00000032217.14	novel	4712	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_14	93.2743375254755	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2594	False	NA	-20	True	AATAAA	-14	NA	70410659	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410513
ES.35514.63	chr9	-	5049	15	NNC	ENSMUSG00000032217.14	novel	4712	15	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_13	109.296288003887	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2599	False	NA	-20	True	AATAAA	-14	NA	70410654	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70404867_70404960_70410221
ES.35514.64	chr9	-	4894	15	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	111.920092668194	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2229	False	NA	-20	True	AATAAA	-14	NA	70411024	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70367946_70368036_70376636_70376764_70383057_70383951_70410740
ES.35514.65	chr9	-	4536	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	103.916419406282	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2233	False	NA	-20	True	AATAAA	-14	NA	70411020	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410221_70410285_70410740
ES.35514.66	chr9	-	4620	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	100.788118833319	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2227	False	NA	-20	True	AATAAA	-14	NA	70411026	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383321_70383531_70383951_70410740
ES.35514.67	chr9	-	4934	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	97.9988806683265	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2190	False	NA	-20	True	AATAAA	-14	NA	70411063	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.68	chr9	-	4693	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-50	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	93.20004768716	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2196	False	NA	-20	True	AATAAA	-14	NA	70411057	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383321_70383531_70383951_70410221_70410285_70410740
ES.35514.7	chr9	-	1428	10	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	2	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	446.163149033574	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATCCTGTGTATATTT	NA	False	NA	-6	True	AATAAA	-16	NA	70328827	70314971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70314980_70315082_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.71	chr9	-	5769	13	NIC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	148	junction_8	61.1071463360329	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2236	False	NA	-20	True	AATAAA	-14	NA	70411017	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.73	chr9	-	4686	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	103.252097100037	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2227	False	NA	-20	True	AATAAA	-14	NA	70411026	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383321_70383531_70383951_70410221_70410285_70410740
ES.35514.74	chr9	-	4864	14	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	-70	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	89.0076786794562	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2176	False	NA	-20	True	AATAAA	-14	NA	70411077	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357827_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.75	chr9	-	4569	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	117.433782760045	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2227	False	NA	-20	True	AATAAA	-14	NA	70411026	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410221_70410285_70410740
ES.35514.77	chr9	-	4772	15	FSM	ENSMUSG00000032217.14	ENSMUST00000113595.2	4735	15	-38	1	-14	-1	multi-exon	FALSE	canonical	2	7	junction_14	103.354872124331	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2579	False	NA	-20	True	AATAAA	-14	NA	70410674	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410513
ES.35514.78	chr9	-	4476	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	98.8935987693391	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2233	False	NA	-20	True	AATAAA	-14	NA	70411020	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
ES.35514.79	chr9	-	4823	14	NNC	ENSMUSG00000032217.14	novel	4712	15	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	88.0494078620184	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTTTGTGTTTCATA	2630	False	NA	-20	True	AATAAA	-14	NA	70410623	70332712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410324
ES.35514.8	chr9	-	5437	6	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	25	1	intron_retention	FALSE	canonical	3	1378	junction_3	61.2653246135202	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTATCCTGTGTATATT	NA	False	NA	-7	True	AATAAA	-15	NA	70328804	70314972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ES.35514.81	chr9	-	4864	14	NNC	ENSMUSG00000032217.14	novel	4712	15	NA	NA	-23436	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	112.252884413594	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGTCTTTGTGTTTCA	NA	False	NA	-22	True	AATAAA	-12	NA	70384676	70332714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70384361
ES.35514.82	chr9	-	4629	13	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-35	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	95.317415629161	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGTCTTTGTGTTTCA	2211	False	NA	-22	True	AATAAA	-12	NA	70411042	70332714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.84	chr9	-	5892	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	68	junction_2	89.908368870197	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTGTCTTTGTGTTTCA	2234	False	NA	-22	True	AATAAA	-12	NA	70411019	70332714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.86	chr9	-	4170	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-34	-455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	96.0746945807038	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTGTTTTATTTCTC	2212	False	NA	1	True	AATAAA	-17	NA	70411041	70333166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70350772_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.87	chr9	-	4438	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-101	-455	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTGTTTTATTTCTC	2145	False	NA	1	True	AATAAA	-17	NA	70411108	70333166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.88	chr9	-	3550	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-19	-455	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	107.999671268402	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTGTTTTATTTCTC	2227	False	NA	1	True	AATAAA	-17	NA	70411026	70333166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70410221_70410285_70410740
ES.35514.89	chr9	-	4472	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	-49	457	-49	-456	multi-exon	FALSE	canonical	3	68	junction_2	86.8932021013645	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTTGTTTTATTTCT	2197	False	NA	0	True	AATAAA	-16	NA	70411056	70333167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.90	chr9	-	4467	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-110	-456	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTTGTTTTATTTCT	2136	False	NA	0	True	AATAAA	-16	NA	70411117	70333167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.91	chr9	-	4232	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-7	-456	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	111.762427661027	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTTGTTTTATTTCT	2239	False	NA	0	True	AATAAA	-16	NA	70411014	70333167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.94	chr9	-	4108	16	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-62	-457	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	92.6976926477796	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2184	False	NA	-1	True	AATAAA	-15	NA	70411069	70333168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410221_70410285_70410740
ES.35514.96	chr9	-	4415	14	NNC	ENSMUSG00000032217.14	novel	4712	15	NA	NA	-7	-457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.605006467254	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2586	False	NA	-1	True	AATAAA	-15	NA	70410667	70333168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349549_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410324
ES.35514.97	chr9	-	4394	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-32	-457	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	90.4619309253653	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2214	False	NA	-1	True	AATAAA	-15	NA	70411039	70333168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
ES.35514.98	chr9	-	5443	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-41	-457	intron_retention	FALSE	canonical	3	128	junction_13	73.9017418984242	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2205	False	NA	-1	True	AATAAA	-15	NA	70411048	70333168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35514.99	chr9	-	4459	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	-65	-458	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCTTGTTTTATTT	2181	False	NA	-2	True	AATAAA	-14	NA	70411072	70333169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ES.35515.1	chr9	+	3838	21	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	-30570	11	intron_retention	FALSE	canonical	0	0	junction_1	112.03235023867	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGAACCTTTTTAATTG	NA	False	NA	28	True	AATAAA	-29	NA	70419465	70499527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70419573_70433953_70434416_70443179_70443315_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.10	chr9	+	3799	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	-33	-11	-33	11	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGAACCTTTTTAATTG	NA	False	NA	28	True	AATAAA	-29	NA	70450002	70499527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.12	chr9	+	4457	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-14	3	intron_retention	FALSE	canonical	2	9	junction_10	82.8308692975467	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450021	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.13	chr9	+	3089	18	NIC	ENSMUSG00000032212.11	novel	3319	20	NA	NA	-14	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	108.980236930934	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTATTGAGAACCTTT	NA	False	NA	21	True	AATAAA	-22	NA	70450021	70499520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.15	chr9	+	3210	19	NIC	ENSMUSG00000032212.11	novel	3319	20	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	105.099423827578	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450022	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.16	chr9	+	3365	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	-7	397	-7	-214	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTAGAGAAGATGTTTA	NA	False	NA	NA	False	TATAAA	-26	NA	70450028	70499119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.17	chr9	+	3615	20	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	78.1358997936614	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70450033	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.18	chr9	+	3950	1	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	0	1956	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTTTCAAAATTATC	NA	False	NA	NA	False	NA	NA	NA	70450035	70453985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450000_70454000
ES.35515.19	chr9	+	3581	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	70.4623835815962	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450038	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480966_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.2	chr9	+	4163	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-464	-8	-348	6	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTGAGAACCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	70449687	70499522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.20	chr9	+	3839	21	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	75.7433000337324	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450038	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.21	chr9	+	3366	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_10	88.2775778322131	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450040	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.22	chr9	+	5433	19	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	8	5	intron_retention	FALSE	canonical	3	20	junction_6	72.6550491902628	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTGAGAACCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	70450043	70499521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.23	chr9	+	3539	21	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	76.1510997950785	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450046	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70480946_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.24	chr9	+	3771	21	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	81.4857502880105	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450054	70499516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.25	chr9	+	3718	20	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	78.917573324966	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGTTGCTAATGTATT	NA	False	NA	11	True	AATAAA	-12	NA	70450055	70499510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.26	chr9	+	5906	19	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-19	0	intron_retention	FALSE	canonical	3	186	junction_5	50.4130163967821	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450056	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70470144_70479430_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.27	chr9	+	3842	22	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	89.9152536251059	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTGAGAACCTTTTT	NA	False	NA	23	True	AATAAA	-24	NA	70450062	70499522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70472842_70472897_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.28	chr9	+	3585	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	86.9280593364421	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450062	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480966_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487413_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.3	chr9	+	3597	22	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-342	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.7810792601826	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70449693	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70449796_70450293_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.30	chr9	+	3758	20	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.8178952625877	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGCTAATGTATTGAG	NA	False	NA	14	True	AATAAA	-15	NA	70450064	70499513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470148_70480733_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.31	chr9	+	3535	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	-87	243	-11	-62	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTAGTGGTTTCATTTG	NA	False	NA	NA	False	NA	NA	NA	70450064	70499271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.32	chr9	+	3791	21	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.9378157995144	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70450065	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466394_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.33	chr9	+	5420	19	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-4	-2	intron_retention	FALSE	canonical	1	4	junction_9	91.3089315875195	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450071	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70484123_70486563_70486714_70487233_70487362_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.34	chr9	+	3777	21	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	92.4767403188499	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450071	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469251_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487442_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.35	chr9	+	2988	17	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	96.9260147935011	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450072	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.37	chr9	+	4956	19	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	76.7827020450136	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450076	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.38	chr9	+	415	2	FSM	ENSMUSG00000032212.11	ENSMUST00000215714.2	1066	2	6	645	6	-645	multi-exon	FALSE	canonical	3	203	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTGGCTCTGCTCTTGT	NA	False	NA	NA	False	AATATA	-12	NA	70450081	70451384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251
ES.35515.39	chr9	+	3699	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	82.7755247642683	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450083	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470101_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.4	chr9	+	3221	18	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	-342	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	104.402435374424	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70449693	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70449796_70451251_70451340_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.40	chr9	+	3127	17	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	80.0950363240445	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70450083	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469205_70483990_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.42	chr9	+	3431	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	81.923378836569	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70450096	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70480946_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.43	chr9	+	5688	19	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	23	12	intron_retention	FALSE	canonical	3	195	junction_12	47.9298935045554	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGAACCTTTTTAATTGT	NA	False	NA	29	True	AATAAA	-30	NA	70450098	70499528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.44	chr9	+	3738	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.3781132218593	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70450099	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480747_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.46	chr9	+	3383	19	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.2386652761717	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70450147	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450294_70451251_70451340_70466318_70466384_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.47	chr9	+	3611	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	74.8178952625877	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450147	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.48	chr9	+	3770	21	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.3781132218593	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450147	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480661_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.49	chr9	+	3479	20	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	84.2901268522271	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	False	NA	13	True	AATAAA	-14	NA	70450148	70499512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70492012_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.5	chr9	+	3583	21	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	-342	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	76.1778182937789	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70449693	70499516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70449796_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.51	chr9	+	4951	20	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	186	junction_6	49.3482171653255	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGCTAATGTATTGAG	NA	False	NA	14	True	AATAAA	-15	NA	70450170	70499513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.53	chr9	+	3000	19	NIC	ENSMUSG00000032212.11	novel	3319	20	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	91.2178236860795	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGCTAATGTATTGAG	NA	False	NA	14	True	AATAAA	-15	NA	70450191	70499513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.54	chr9	+	3089	19	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.22990732311	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATTGAGAACCTTTT	NA	False	NA	22	True	AATAAA	-23	NA	70450204	70499521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450364_70466318_70466384_70469057_70469257_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.55	chr9	+	2989	19	NIC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	140	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	91.7792574537702	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450319	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.56	chr9	+	3744	21	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	230	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	75.4131785565361	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70450409	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450670_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.57	chr9	+	3487	21	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	255	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	86.7063290654148	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70450434	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70450670_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480966_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.59	chr9	+	180	1	Intergenic	novelGene_28902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGGGTGGTGGTTAGGG	NA	False	NA	NA	False	AAGAAA	-5	NA	70464680	70464860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70464700_70464900
ES.35515.6	chr9	+	3520	21	NNC	ENSMUSG00000032212.11	novel	1786	4	NA	NA	-330	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	81.9200219726533	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGTATTGAGAACCTT	NA	False	NA	20	True	AATAAA	-21	NA	70449705	70499519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70449796_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.60	chr9	+	3939	16	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-13667	1	intron_retention	FALSE	canonical	3	20	junction_3	77.056862121423	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70469022	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.61	chr9	+	3757	17	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-13451	0	intron_retention	FALSE	canonical	3	18	junction_2	77.5306139131505	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70469238	70499514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70470144_70479430_70479459_70480966_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.62	chr9	+	180	1	Intergenic	novelGene_28903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATCATGG	NA	False	NA	NA	False	NA	NA	NA	70473904	70474084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70473900_70474100
ES.35515.63	chr9	+	7253	15	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-7900	1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	79.7249416840841	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70474789	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.64	chr9	+	8976	11	NIC	ENSMUSG00000032212.11	novel	3319	20	NA	NA	-4260	2	intron_retention	FALSE	canonical	1	1	junction_6	95.2712443500136	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70478429	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70492034_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.65	chr9	+	6444	11	NIC	ENSMUSG00000032212.11	novel	3319	20	NA	NA	-2664	1	intron_retention	FALSE	canonical	1	1	junction_5	95.1035751168167	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTAATGTATTGAGAACC	NA	False	NA	18	True	AATAAA	-19	NA	70480025	70499517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70484123_70486563_70486714_70487233_70487613_70488064_70488151_70488582_70488747_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.66	chr9	+	6054	12	NNC	ENSMUSG00000032212.11	novel	3691	21	NA	NA	-2102	1	intron_retention	FALSE	non_canonical	0	0	junction_7	93.2877889664448	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70480587	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70484123_70486563_70486714_70487233_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492149_70493201_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.67	chr9	+	5622	13	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-1774	1	intron_retention	FALSE	canonical	3	195	junction_6	49.1383392972218	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70480915	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.69	chr9	+	2909	6	ISM	ENSMUSG00000032212.11	ENSMUST00000217593.2	3319	20	40530	-182	1945	1	3prime_fragment	FALSE	canonical	3	252	junction_2	38.3176199678425	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAATGTATTGAGAA	NA	False	NA	16	True	AATAAA	-17	NA	70490691	70499515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.7	chr9	+	3661	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	-319	2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	70.7250930092244	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATGTATTGAGAACCT	NA	False	NA	19	True	AATAAA	-20	NA	70449716	70499518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ES.35515.9	chr9	+	3105	2	FSM	ENSMUSG00000032212.11	ENSMUST00000215714.2	1066	2	-78	-1961	-38	1961	multi-exon	FALSE	canonical	3	203	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTCAAAATTATCAACTA	NA	False	NA	NA	False	NA	NA	NA	70449997	70453990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70450364_70451251
ES.35516.1	chr9	+	3910	1	Intergenic	novelGene_28904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCTTTCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	70524792	70528702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70524800_70528700
ES.35517.1	chr9	-	177	2	Antisense	novelGene_ENSMUSG00000064921.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	107	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	7652	False	NA	NA	False	NA	NA	NA	70535515	70430323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_70430421_70535435
ES.35517.11	chr9	-	3649	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-129	4561	-129	973	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTAAGTAAGTCTCTT	NA	False	NA	NA	False	TATAAA	-16	NA	70564585	70510856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35517.13	chr9	-	2549	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-6	5538	-6	-4	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTGACACTAATACTTA	NA	False	NA	NA	False	NA	NA	NA	70564462	70511833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35517.14	chr9	-	233	1	Intergenic	novelGene_28905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTGCTATCACTAG	7651	False	NA	NA	False	AATGAA	-26	NA	70535516	70535283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70535300_70535500
ES.35517.15	chr9	-	1036	2	ISM	ENSMUSG00000042444.11	ENSMUST00000214293.2	1779	5	-33	18583	-6	-18583	5prime_fragment	FALSE	canonical	3	20	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGCTATTAGGTATTC	NA	False	NA	NA	False	AATAAA	-20	NA	70564462	70552100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_70552229_70563554
ES.35517.2	chr9	-	177	1	Intergenic	novelGene_28899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	70430500	70430323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70430300_70430500
ES.35517.3	chr9	-	246	1	Intergenic	novelGene_28900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTCAATCCCCAACAC	NA	False	NA	NA	False	NA	NA	NA	70439706	70439460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70439500_70439700
ES.35517.4	chr9	-	159	1	Intergenic	novelGene_28901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAATTAAA	1106	False	NA	NA	False	NA	NA	NA	70456785	70456626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_70456600_70456800
ES.35517.5	chr9	-	8214	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-133	0	-133	0	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCTCTGTGTGTCAAC	NA	False	NA	2	True	AATAAA	-20	NA	70564589	70506295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35517.6	chr9	-	4042	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	25	4014	2	1520	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTCCTGTCCTTGAA	NA	False	NA	NA	False	ATTAAA	-32	NA	70564431	70510309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35517.8	chr9	-	3842	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	-120	4359	-120	1175	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTATGCTTGAGGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	70564576	70510654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35517.9	chr9	-	3699	8	NIC	ENSMUSG00000042444.11	novel	8081	9	NA	NA	-120	1175	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.71580529916752	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTATGCTTGAGGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	70564576	70510654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_70512572_70514739_70514941_70518110_70518285_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ES.35518.1	chr9	+	136	1	Intergenic	novelGene_28906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9510	False	NA	NA	False	NA	NA	NA	70571015	70571151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70571000_70571200
ES.35519.1	chr9	+	177	1	Intergenic	novelGene_28907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATGCATCGAG	755	False	NA	NA	False	NA	NA	NA	70574366	70574543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70574400_70574500
ES.3552.1	chr10	-	1681	3	Antisense	novelGene_ENSMUSG00000019951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5454	False	NA	NA	False	NA	NA	NA	89626559	89621700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_89623146_89625157_89625240_89626405
ES.35520.1	chr9	+	4766	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-172	-1	-172	1	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTCTATGCTCTTTGG	4778	False	NA	15	True	AATAAA	-20	NA	70586106	70687512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.10	chr9	+	4410	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4918	False	NA	12	True	AATAAA	-17	NA	70586246	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70686079_70686291
ES.35520.11	chr9	+	4496	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-31	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	71.2211631583805	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGGTCTATGCTCTTT	4919	False	NA	13	True	AATAAA	-18	NA	70586247	70687510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70685281
ES.35520.12	chr9	+	4465	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	71.7636782098304	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4919	False	NA	14	True	AATAAA	-19	NA	70586247	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70586542_70610568_70610720_70625939_70626059_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.13	chr9	+	4473	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	71.582583960979	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4919	False	NA	14	True	AATAAA	-19	NA	70586247	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70586542_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.14	chr9	+	4648	16	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	69.2751679094962	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGTCTATGCTCTTTGG	4926	False	NA	15	True	AATAAA	-20	NA	70586254	70687512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651102_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.15	chr9	+	4758	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.1023723328082	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4929	False	NA	12	True	AATAAA	-17	NA	70586257	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70608556_70608703_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.16	chr9	+	4741	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.1023723328082	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGAGGTCTATGCTC	4931	False	NA	10	True	AATAAA	-15	NA	70586259	70687507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70587814_70587948_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.17	chr9	+	4699	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.1023723328082	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4932	False	NA	14	True	AATAAA	-19	NA	70586260	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70606022_70606111_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.18	chr9	+	4178	13	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-18	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	77.262000146687	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGAGGTCTATGCTC	4932	False	NA	10	True	AATAAA	-15	NA	70586260	70687507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70586542_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.19	chr9	+	4551	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGAGGTCTATGCTC	4938	False	NA	10	True	AATAAA	-15	NA	70586266	70687507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70687422_70687471
ES.35520.2	chr9	+	4301	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4880	False	NA	12	True	AATAAA	-17	NA	70586208	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70685848_70686207
ES.35520.21	chr9	+	4436	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4941	False	NA	14	True	AATAAA	-19	NA	70586269	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70686027_70686192
ES.35520.23	chr9	+	3392	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATCAACTTGAGGTCT	4945	False	NA	4	True	AATAAA	-9	NA	70586273	70687501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70685521_70686716
ES.35520.24	chr9	+	4587	16	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.5573304707866	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4945	False	NA	14	True	AATAAA	-19	NA	70586273	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673244_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.25	chr9	+	3312	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	4954	False	NA	12	True	AATAAA	-17	NA	70586282	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70685442_70686716
ES.35520.26	chr9	+	2867	16	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	6	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	69.566914230513	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTTTTGAAACTTGAA	4956	False	NA	10	True	AATAAA	-18	NA	70586284	70687460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683699_70686867
ES.35520.27	chr9	+	4257	15	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	71.3320776798381	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGAGGTCTATGCTC	4958	False	NA	10	True	AATAAA	-15	NA	70586286	70687507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661531_70673296_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.28	chr9	+	4516	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4960	False	NA	14	True	AATAAA	-19	NA	70586288	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70687247_70687313
ES.35520.3	chr9	+	4538	16	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-68	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5731749071916	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTGAGGTCTATGCTC	4882	False	NA	10	True	AATAAA	-15	NA	70586210	70687507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610687_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.31	chr9	+	4084	14	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	62	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	71.0563573310634	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	5031	False	NA	12	True	AATAAA	-17	NA	70586359	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70676206_70676295_70683654_70683782_70685281
ES.35520.32	chr9	+	4450	17	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	62	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	67.3660418441666	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	5031	False	NA	12	True	AATAAA	-17	NA	70586359	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281_70685848_70685907
ES.35520.33	chr9	+	4596	16	NNC	ENSMUSG00000054693.15	novel	826	2	NA	NA	506	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5731749071916	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	5475	False	NA	12	True	AATAAA	-17	NA	70586803	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70587072_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.34	chr9	+	4125	14	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	39659	56	39640	-56	3prime_fragment	FALSE	canonical	3	235	junction_11	23.4230453454379	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAAGGTTTTTTGAAAC	NA	False	NA	5	True	AATAAA	-13	NA	70625937	70687455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.35	chr9	+	5321	12	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	59658	0	-37398	0	3prime_fragment	FALSE	canonical	3	235	junction_9	25.1369801009398	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	70645936	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.36	chr9	+	3647	10	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	67235	2	-29821	-2	3prime_fragment	FALSE	canonical	3	235	junction_7	25.0338043058719	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	NA	False	NA	12	True	AATAAA	-17	NA	70653513	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.37	chr9	+	3370	8	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	75163	2	-21893	-2	3prime_fragment	FALSE	canonical	3	235	junction_5	25.4998999597878	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGGTCTATGCTCTT	2907	False	NA	12	True	AATAAA	-17	NA	70661441	70687509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.38	chr9	+	2552	8	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	75303	680	-21753	-680	3prime_fragment	FALSE	canonical	3	235	junction_5	25.4998999597878	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGAGTCTAAGGTTTA	3047	False	NA	NA	False	NA	NA	NA	70661581	70686831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.39	chr9	+	150	1	Intergenic	novelGene_28908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	70675403	70675553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_70675400_70675600
ES.35520.4	chr9	+	4491	15	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.7636782098304	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4886	False	NA	14	True	AATAAA	-19	NA	70586214	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586542_70610568_70610720_70625939_70626052_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.40	chr9	+	4299	3	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-2897	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	1303	False	NA	14	True	AATAAA	-19	NA	70680437	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70683782_70685281_70685442_70686716
ES.35520.41	chr9	+	4103	2	FSM	ENSMUSG00000054693.15	ENSMUST00000145377.2	826	2	-1426	-1851	-1426	0	multi-exon	FALSE	canonical	3	243	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	2774	False	NA	14	True	AATAAA	-19	NA	70681908	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70683782_70685281
ES.35520.42	chr9	+	4834	1	Genic_Genomic	ENSMUSG00000054693.15	novel	NA	NA	NA	NA	3124	3781	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGAGTTCATATAGAGAG	7324	False	NA	NA	False	NA	NA	NA	70686458	70691292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_70686500_70691300
ES.35520.5	chr9	+	3082	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-64	1575	-64	272	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTTAATTGACATAC	4886	False	NA	NA	False	TATAAA	-23	NA	70586214	70685936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.6	chr9	+	4371	16	NNC	ENSMUSG00000054693.15	novel	826	2	NA	NA	-60	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.5731749071916	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAACTTGAGGTCTATG	4890	False	NA	7	True	AATAAA	-12	NA	70586218	70687504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586267_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.7	chr9	+	4599	16	NNC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.5731749071916	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4897	False	NA	14	True	AATAAA	-19	NA	70586225	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70586490_70610563_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.8	chr9	+	4477	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	69.8886870060425	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4902	False	NA	14	True	AATAAA	-19	NA	70586230	70687511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35520.9	chr9	+	3808	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	-34	819	-34	-819	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTGCTTCTGTTTT	4916	False	NA	NA	False	ATTAAA	-18	NA	70586244	70686692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ES.35521.1	chr9	-	1044	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118094	2	117899	-2	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTGTGAGATGACTC	NA	False	NA	NA	False	TATAAA	-15	NA	70723996	70705411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
ES.35521.4	chr9	-	4317	8	NNC	ENSMUSG00000032207.11	novel	1920	9	NA	NA	82043	-80	intron_retention	FALSE	canonical	0	0	junction_6	26.2398668488409	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTAATGGTTGCCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	70759852	70705533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70730846_70759828
ES.35522.1	chr9	+	4856	7	NNC	ENSMUSG00000111631.2	novel	1723	2	NA	NA	-28216	157068	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.372677996249965	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGTGAGATCTTATCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	70809553	70998780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_70809616_70821620_70821739_70840197_70840345_70929822_70929929_70983418_70985649_70985706_70987673_70998553
ES.35523.1	chr9	-	2246	2	Intergenic	novelGene_28910	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	71027852	71021754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71023785_71027636
ES.35523.2	chr9	-	5990	3	Intergenic	novelGene_28909	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	71027849	71021754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71025631_71025696_71025966_71026004
ES.35524.1	chr9	+	172	1	Intergenic	novelGene_28911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAACGAGAAGCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	71068802	71068974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71068800_71069000
ES.35525.1	chr9	+	179	1	Intergenic	novelGene_28912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGATCGACCAGATA	NA	False	NA	NA	False	NA	NA	NA	71112827	71113006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71112800_71113000
ES.35526.1	chr9	+	2632	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	-366	-2	-366	2	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTGTGTTTGTGAGTC	NA	False	NA	NA	False	AATAAA	-26	NA	71122704	71203527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
ES.35526.2	chr9	+	2408	14	NNC	ENSMUSG00000013584.6	novel	2264	14	NA	NA	79	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.09800470240035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGGGACTGTTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	71123149	71203517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_71123477_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
ES.35526.3	chr9	+	6991	2	ISM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	32220	41031	32220	-41031	intron_retention	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGTAAGGGGAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	71155290	71162494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_71159985_71160197
ES.35527.1	chr9	-	176	1	Intergenic	novelGene_28913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTTATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	71176050	71175874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71175900_71176000
ES.35528.1	chr9	+	178	1	Intergenic	novelGene_28914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	71209522	71209700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71209500_71209700
ES.35529.1	chr9	-	4505	2	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	6177	4297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	9624	False	NA	NA	False	AAGAAA	-30	NA	71386063	71381421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71382887_71383023
ES.35529.10	chr9	-	2083	5	NNC	ENSMUSG00000032199.14	novel	2138	4	NA	NA	393	8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1170.92514171488	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCATGGCGATGTGTTC	2893	False	NA	-25	True	AATAAA	-23	NA	71392794	71385744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016_71392100_71392716
ES.35529.12	chr9	-	2146	4	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1124.0945986289	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGAGCTCATGGCGATGT	2485	False	NA	-29	True	AATAAA	-19	NA	71393202	71385748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386814_71388623_71388829_71390448_71391088_71392965
ES.35529.13	chr9	-	2874	4	FSM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	-733	-3	214	3	multi-exon	FALSE	canonical	3	31	junction_3	1098.58130736368	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCATGGCGATG	2714	False	NA	-30	True	AATAAA	-18	NA	71392973	71385749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016
ES.35529.15	chr9	-	1988	3	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-49	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1142.5	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCATGGCGATG	2421	False	NA	-30	True	AATAAA	-18	NA	71393266	71385749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386830_71390480_71391088_71392965
ES.35529.16	chr9	-	1903	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-11	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	1008.45361197231	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGCTCATGGCGATG	2484	False	NA	-30	True	AATAAA	-18	NA	71393203	71385749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386360_71386611_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.17	chr9	-	849	3	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	1140	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCGAGCTCATGGCGA	2464	False	NA	-32	True	AATAAA	-16	NA	71393223	71385751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386314_71391058_71391088_71392965
ES.35529.18	chr9	-	1897	4	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1112.19732461865	1222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCGAGCTCATGGCGA	2471	False	NA	-32	True	AATAAA	-16	NA	71393216	71385751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386823_71388623_71388829_71390448_71390819_71392965
ES.35529.19	chr9	-	1936	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1010.17878986841	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCCGAGCTCATGGCG	2471	False	NA	-33	True	AATAAA	-15	NA	71393216	71385752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386314_71386542_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.2	chr9	-	4572	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-29	-2343	-29	2343	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTACTCAGTGGAGGTT	2441	False	NA	NA	False	AATAAA	-23	NA	71393246	71383375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.21	chr9	-	1512	3	NIC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1115	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCCGAGCTCATGGCG	2485	False	NA	-33	True	AATAAA	-15	NA	71393202	71385752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71386823_71388623_71388829_71392965
ES.35529.22	chr9	-	2434	6	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-4289	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1143.87901458152	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCCCGAGCTCATGGC	NA	False	NA	-34	True	AATAAA	-14	NA	71397506	71385753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965_71393376_71393634_71393692_71397452
ES.35529.23	chr9	-	5693	2	ISM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-32	37	-32	-3	intron_retention	FALSE	canonical	3	2231	junction_1	0	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTCCCCGAGCTCATG	2438	False	NA	-36	True	AATAAA	-12	NA	71393249	71385755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_71386823_71388623
ES.35529.24	chr9	-	1921	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	50	junction_1	991.203151478041	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTCCCCGAGCTCATG	2472	False	NA	-36	True	AATAAA	-12	NA	71393215	71385755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386314_71386553_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.26	chr9	-	5846	2	ISM	ENSMUSG00000032199.14	ENSMUST00000169804.2	720	3	-29	-2998	-4	-3	intron_retention	FALSE	canonical	3	2473	junction_1	0	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTCCCCGAGCTCATG	2466	False	NA	-36	True	AATAAA	-12	NA	71393221	71385755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_71388829_71390448
ES.35529.27	chr9	-	1839	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	7	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1012.76660070324	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAAATAAAATACCA	2477	False	NA	-61	True	NA	NA	NA	71393210	71385780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386065_71386356_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.28	chr9	-	1907	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-62	355	-62	-321	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGGGGAGCTGCTCCT	2408	False	NA	NA	False	NA	NA	NA	71393279	71386073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.29	chr9	-	1521	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	6	673	6	-639	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCATTTTCCTTATCTG	2476	False	NA	NA	False	NA	NA	NA	71393211	71386391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.3	chr9	-	3381	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	15	-1196	-10	1196	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCTTTATCCAGGAGC	2485	False	NA	NA	False	AATATA	-16	NA	71393202	71384522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.4	chr9	-	3194	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	-23	-971	-23	971	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGATTTTTTTTTTTTT	2447	False	NA	NA	False	AATAAA	-18	NA	71393240	71384747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ES.35529.8	chr9	-	4038	3	ISM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	15	25	-10	9	intron_retention	FALSE	canonical	3	2231	junction_1	121	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATGGCGATGTGTTCT	2485	False	NA	-24	True	AATAAA	-24	NA	71393202	71385743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_71386823_71388623_71388829_71390448
ES.35529.9	chr9	-	2001	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1012.76660070324	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATGGCGATGTGTTCT	2487	False	NA	-24	True	AATAAA	-24	NA	71393200	71385743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71386032_71386188_71386823_71388623_71388829_71390448_71391088_71392965
ES.3553.1	chr10	-	177	1	Intergenic	novelGene_2715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	89632140	89631963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_89632000_89632100
ES.35530.1	chr9	-	191	1	Intergenic	novelGene_28915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAGAAAAGCCACCT	NA	False	NA	NA	False	NA	NA	NA	71458383	71458192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71458200_71458400
ES.35531.1	chr9	-	6712	19	FSM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	42	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.66666666666667	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCTCTTGTATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	71678842	71533790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
ES.35532.1	chr9	-	199	1	Intergenic	novelGene_28916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTAAGGAGATTCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	71726823	71726624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71726600_71726800
ES.35533.1	chr9	-	178	1	Intergenic	novelGene_28917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTCCAAGGTTGAC	NA	False	NA	NA	False	NA	NA	NA	71728859	71728681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_71728700_71728900
ES.35534.1	chr9	+	4180	2	Antisense	novelGene_ENSMUSG00000032228.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCCTCGAACTTCG	NA	False	NA	NA	False	NA	NA	NA	71833019	71837484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_71834280_71834564
ES.35535.1	chr9	+	1488	1	Intergenic	novelGene_28918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATTACTGCAGACCAGA	NA	False	NA	NA	False	NA	NA	NA	71881933	71883421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71881900_71883400
ES.35536.1	chr9	+	154	1	Intergenic	novelGene_28919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	71904996	71905150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71905000_71905200
ES.35537.1	chr9	+	167	1	Intergenic	novelGene_28920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAATAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71925641	71925808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_71925600_71925800
ES.35538.1	chr9	+	6103	1	FSM	ENSMUSG00002076016.1	ENSMUST00020183751.1	90	1	-4284	-1729	-4284	1729	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGATAGCCACACTAAAGT	NA	False	NA	NA	False	NA	NA	NA	71936195	71942298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_71936200_71942300
ES.35539.1	chr9	-	6295	21	NNC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	21.2894339990522	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTGAAGATTTATTATT	9381	False	NA	NA	False	NA	NA	NA	72019126	71749967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71753843_71757053_71757208_71763586_71763817_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.11	chr9	-	6383	18	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	-8409	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_17	23.2731634808916	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	NA	False	NA	-32	True	AATAAA	-25	NA	71916167	71751554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71913982
ES.35539.18	chr9	-	4621	21	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_20	22.755823430498	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAACTAGTGAGTTT	NA	False	NA	-36	True	AATAAA	-21	NA	72018479	71751558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018296
ES.35539.19	chr9	-	4713	21	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	28.753956249532	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAACTAGTGAGTTT	9365	False	NA	-36	True	AATAAA	-21	NA	72019142	71751558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71913982_71914045_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.2	chr9	-	6003	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-15	311	9	-311	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAGTATTTCAAC	9363	False	NA	NA	False	NA	NA	NA	72019144	71750280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.20	chr9	-	4660	20	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	23.4841845761729	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAACTAGTGAGTTT	9363	False	NA	-36	True	AATAAA	-21	NA	72019144	71751558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.23	chr9	-	4816	22	NNC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	28.4782607943056	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAACTAGTGAGT	9408	False	NA	-38	True	AATAAA	-19	NA	72019099	71751560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_71952256_71952395_72016957_72017031_72018019_72018117_72018857
ES.35539.24	chr9	-	4813	23	NNC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	31.6355799275969	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAACTAGTGAGT	9365	False	NA	-38	True	AATAAA	-19	NA	72019142	71751560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71913982_71914045_71915809_71915840_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.25	chr9	-	4612	19	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	23.9642223036193	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAACTAGTGAGT	9306	False	NA	-38	True	AATAAA	-19	NA	72019201	71751560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.27	chr9	-	4674	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-54	1679	-30	-90	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAATTTCTTTTTTCTG	9324	False	NA	-126	True	GATAAA	-23	NA	72019183	71751648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.28	chr9	-	4600	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-81	102	-31	-93	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTCAAATTTCTTTTTT	9323	False	NA	-129	True	GATAAA	-20	NA	72019184	71751651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.29	chr9	-	4461	19	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	-1	-97	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	23.8548206686993	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAAGTTCAAATTTCTT	9353	False	NA	-133	True	GATAAA	-16	NA	72019154	71751655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_72016957_72017031_72018019_72018117_72018857
ES.35539.3	chr9	-	4767	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-114	-32	-64	16	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGTATTTTGTTTTC	9290	False	NA	5	True	AGTAAA	-33	NA	72019217	71751517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.31	chr9	-	4248	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-3	376	-3	79	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTACTTTATTTTATT	9401	False	NA	NA	False	AGTAAA	-3	NA	72019106	71751925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.32	chr9	-	3304	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-48	3043	-24	-219	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCACTAAGACTTTTC	9330	False	NA	NA	False	AATAAA	-16	NA	72019177	71753012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.34	chr9	-	3152	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	5	1464	-4	-220	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATCACTAAGACTTTT	9409	False	NA	NA	False	AATAAA	-15	NA	72019098	71753013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.35	chr9	-	3196	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-78	3181	-54	-357	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCAGTCCTGTATGCT	9300	False	NA	NA	False	NA	NA	NA	72019207	71753150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.36	chr9	-	2946	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-25	1700	1	-456	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTCTCTCTTGTTTTT	9379	False	NA	NA	False	NA	NA	NA	72019128	71753249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.37	chr9	-	6337	2	Genic_Genomic	ENSMUSG00000104469.2	novel	2299	1	NA	NA	949	5142	multi-exon	FALSE	canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71897604	71891112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_71894048_71894202
ES.35539.4	chr9	-	4827	22	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	9	15	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	27.1649033274392	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAATGTATTTTGTTTT	9363	False	NA	4	True	AGTAAA	-32	NA	72019144	71751518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71913982_71914045_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.6	chr9	-	5690	21	NNC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	-237	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	23.1137945824566	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGTTTTCCACAGAATA	9117	False	NA	-10	True	AGTAAA	-18	NA	72019390	71751532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018182_72018229
ES.35539.7	chr9	-	4994	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-258	1563	-234	1	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGTTTTCCACAGAATA	9120	False	NA	-10	True	AGTAAA	-18	NA	72019387	71751532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.8	chr9	-	6501	19	NIC	ENSMUSG00000032228.17	novel	4621	20	NA	NA	-35	0	intron_retention	FALSE	canonical	3	70	junction_15	8.96013117187935	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGAGTTTTTTACACTC	9319	False	NA	-27	True	AATAAA	-30	NA	72019188	71751549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ES.35539.9	chr9	-	4002	14	FSM	ENSMUSG00000032228.17	ENSMUST00000183918.8	4308	14	308	-2	1	2	multi-exon	FALSE	canonical	2	5	junction_13	26.2527541525021	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTGAGTTTTTTACA	NA	False	NA	-30	True	AATAAA	-27	NA	71803370	71751552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ES.3554.1	chr10	+	176	1	Intergenic	novelGene_2718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATAG	4072	False	NA	NA	False	NA	NA	NA	89690465	89690641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_89690500_89690600
ES.35540.1	chr9	-	175	1	Intergenic	novelGene_28921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAAAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72064887	72064712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72064700_72064900
ES.35541.1	chr9	+	448	1	Intergenic	novelGene_28922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCCTGTTTTACAAC	NA	False	NA	NA	False	NA	NA	NA	72076229	72076677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72076200_72076700
ES.35541.2	chr9	+	277	1	Intergenic	novelGene_28923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTAAGGAAGAGGGAC	NA	False	NA	NA	False	NA	NA	NA	72076230	72076507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72076200_72076500
ES.35542.1	chr9	+	180	1	Intergenic	novelGene_28924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGATAACTAAT	NA	False	NA	NA	False	NA	NA	NA	72101970	72102150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72102000_72102200
ES.35543.1	chr9	-	180	1	Intergenic	novelGene_28925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGATAAATAAATAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	72112788	72112608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72112600_72112800
ES.35544.1	chr9	-	173	1	Intergenic	novelGene_28926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	72121744	72121571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72121600_72121700
ES.35545.1	chr9	+	179	1	Intergenic	novelGene_28927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTTTGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	72147555	72147734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72147600_72147700
ES.35546.1	chr9	+	4364	21	FSM	ENSMUSG00000038535.18	ENSMUST00000183410.8	4200	21	-147	-17	-3	1	multi-exon	FALSE	canonical	3	22	junction_19	12.0883208097734	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGGCTAGCCTG	NA	False	NA	21	True	AATAAA	-30	NA	72182138	72271060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.10	chr9	+	4835	25	NNC	ENSMUSG00000038535.18	novel	4200	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.3441031365569	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTATATTCAGATT	NA	False	NA	4	True	AATAAA	-13	NA	72182189	72271043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72236791_72236893_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.11	chr9	+	4478	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	23.9526047169671	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGATTCC	NA	False	NA	6	True	AATAAA	-15	NA	72182189	72271045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269219
ES.35546.12	chr9	+	4478	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.3914597893934	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGATTCCTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	72182189	72271051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215
ES.35546.13	chr9	+	4461	22	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	19.6289850006106	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	14	True	AATAAA	-23	NA	72182189	72271053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.14	chr9	+	4466	23	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	3	8	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	18.6097370763154	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCAGATTCCTGTTTG	NA	False	NA	12	True	AATAAA	-21	NA	72182191	72271051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.15	chr9	+	4584	24	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.8302364612606	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTATATTCAGATT	NA	False	NA	4	True	AATAAA	-13	NA	72182192	72271043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72206001_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.16	chr9	+	1901	14	ISM	ENSMUSG00000038535.18	ENSMUST00000184517.8	3919	20	32	11771	4	14	5prime_fragment	FALSE	canonical	3	38	junction_1	9.81666256450355	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGTTGGATGTATT	NA	False	NA	NA	False	TATAAA	-16	NA	72182192	72236604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309
ES.35546.18	chr9	+	4410	22	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	22.0186480438288	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTATATTCAGATT	NA	False	NA	4	True	AATAAA	-13	NA	72182202	72271043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215
ES.35546.19	chr9	+	4227	20	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.4101571907666	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182208	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.2	chr9	+	4405	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	-18	0	1	0	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182142	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.20	chr9	+	4570	24	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	13	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	25.7043684179479	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGATTCCTGTTTGG	NA	False	NA	13	True	AATAAA	-22	NA	72182209	72271052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72236791_72236893_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.22	chr9	+	4395	21	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.529050141611	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182214	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72267567_72267624_72269215
ES.35546.23	chr9	+	4584	24	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.4972167990866	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	19	True	AATAAA	-28	NA	72182225	72271058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.24	chr9	+	4242	21	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	16.6015059557861	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGATTCC	NA	False	NA	6	True	AATAAA	-15	NA	72182254	72271045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215
ES.35546.25	chr9	+	4151	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	99	137	-1	13	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATGTACTTTGAATTC	NA	False	NA	NA	False	NA	NA	NA	72182259	72270922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.26	chr9	+	4172	20	FSM	ENSMUSG00000038535.18	ENSMUST00000184517.8	3919	20	99	-352	-1	352	multi-exon	FALSE	canonical	1	1	junction_19	16.0630682207609	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCCATTGCCCTTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72182259	72248727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72246897
ES.35546.27	chr9	+	6127	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	18.6638724828054	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182268	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.28	chr9	+	4146	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	8	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	20.3340582005288	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCAGATTCCTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	72182270	72271050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215_72269500_72269584
ES.35546.29	chr9	+	4421	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.197660888512	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGATTCCTGTTTGG	NA	False	NA	13	True	AATAAA	-22	NA	72182281	72271052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72236791_72236893_72238147_72238456_72238574_72238716_72242328_72242392_72267567_72267624_72269215
ES.35546.3	chr9	+	4505	22	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.1571848773849	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGGCTAGCCTG	NA	False	NA	21	True	AATAAA	-30	NA	72182142	72271060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.30	chr9	+	4479	23	NIC	ENSMUSG00000038535.18	novel	4200	21	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	23.5110752871285	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGATTCC	NA	False	NA	6	True	AATAAA	-15	NA	72182281	72271045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.31	chr9	+	4699	22	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	2	7	intron_retention	FALSE	canonical	0	0	junction_14	17.0058013310624	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTCAGATTCCTGTTT	NA	False	NA	11	True	AATAAA	-20	NA	72182287	72271050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236893_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.32	chr9	+	1658	2	FSM	ENSMUSG00000038535.18	ENSMUST00000184968.2	3062	2	91	1313	2	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATTGATACACGCCGTG	NA	False	NA	NA	False	NA	NA	NA	72182287	72194702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72193068
ES.35546.33	chr9	+	4131	21	NNC	ENSMUSG00000038535.18	novel	4200	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.592764992006	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	19	True	AATAAA	-28	NA	72182287	72271058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72202564_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229815_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35546.34	chr9	+	4402	23	NIC	ENSMUSG00000038535.18	novel	5910	23	NA	NA	5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	21.6533546730072	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTCCTGTTTGGCTAG	NA	False	NA	17	True	AATAAA	-26	NA	72182290	72271056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267574_72267624_72269215
ES.35546.35	chr9	+	4422	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.378186534506	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGTTTGGCTAGCCTG	NA	False	NA	21	True	AATAAA	-30	NA	72182291	72271060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205963_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.36	chr9	+	184	1	Intergenic	novelGene_28928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACAGTTTTAGG	NA	False	NA	NA	False	NA	NA	NA	72184764	72184948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72184800_72184900
ES.35546.37	chr9	+	4413	10	NNC	ENSMUSG00000038535.18	novel	4990	23	NA	NA	-3598	8	intron_retention	FALSE	non_canonical	0	0	junction_1	30.3575401986653	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAACGAACTGACTGGCA	NA	False	NA	NA	False	NA	NA	NA	72198971	72220968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72199532_72200645_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932
ES.35546.39	chr9	+	4240	20	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	686	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	28.1952040085876	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGATTCCTGTTTGG	NA	False	NA	13	True	AATAAA	-22	NA	72203255	72271052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236325_72236447_72238160_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215
ES.35546.4	chr9	+	4565	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2417761386937	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTGGCTAGCCTGT	NA	False	NA	22	True	AATAAA	-31	NA	72182146	72271061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202543_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.40	chr9	+	4156	19	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	686	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	16.7671968107042	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72203255	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72258806_72258853_72267567_72267624_72269215
ES.35546.41	chr9	+	3947	18	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	901	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	24.0226248605416	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCAGATTCCTGTTTGG	NA	False	NA	13	True	AATAAA	-22	NA	72215329	72271052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.42	chr9	+	3763	14	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-3904	0	intron_retention	FALSE	canonical	1	1	junction_5	22.9934387348233	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72226433	72271059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72236791_72237236_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.43	chr9	+	2920	10	NIC	ENSMUSG00000038535.18	novel	4990	23	NA	NA	1296	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8088892715688	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	14	True	AATAAA	-23	NA	72236825	72271053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72236893_72236990_72237236_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.44	chr9	+	7160	3	ISM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	71416	16	7547	0	3prime_fragment	FALSE	canonical	3	36	junction_1	16	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTATATTCAGATT	NA	False	NA	4	True	AATAAA	-13	NA	72253576	72271043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72258853_72267567_72267624_72269215
ES.35546.45	chr9	+	913	1	Intergenic	novelGene_28929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGCTTTATGTGGT	NA	False	NA	NA	False	AATAAA	-13	NA	72259229	72260142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72259200_72260100
ES.35546.46	chr9	+	3502	1	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	60	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGATTCC	NA	False	NA	6	True	AATAAA	-15	NA	72267543	72271045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72267500_72271000
ES.35546.5	chr9	+	4686	24	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.5146874977001	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGTTTGGCTAGCC	NA	False	NA	19	True	AATAAA	-28	NA	72182160	72271058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72216533_72216689_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.6	chr9	+	4522	23	NNC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.2417761386937	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGATTCCTGTTTGGC	NA	False	NA	14	True	AATAAA	-23	NA	72182164	72271053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72182312_72199063_72199209_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ES.35546.7	chr9	+	3853	20	FSM	ENSMUSG00000038535.18	ENSMUST00000184517.8	3919	20	24	42	-3	-42	multi-exon	FALSE	canonical	1	1	junction_19	16.0630682207609	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGATACACTGGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	72182184	72248333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72246897
ES.35546.8	chr9	+	1578	6	ISM	ENSMUSG00000038535.18	ENSMUST00000184517.8	3919	20	26	38092	-1	3826	5prime_fragment	FALSE	canonical	3	38	junction_1	14.0427917452336	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTGTGTCTTAAATAT	NA	False	NA	NA	False	NA	NA	NA	72182186	72210283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148
ES.35546.9	chr9	+	4419	22	NIC	ENSMUSG00000038535.18	novel	4387	22	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	19.5382060742188	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGATTCC	NA	False	NA	6	True	AATAAA	-15	NA	72182186	72271045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226005_72226124_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ES.35547.1	chr9	-	4376	1	Antisense	novelGene_ENSMUSG00000038535.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAGGATCAAGAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	72192425	72188049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72188000_72192400
ES.35548.1	chr9	-	271	1	FSM	ENSMUSG00000098893.2	ENSMUST00000183380.2	799	1	789	-261	789	261	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	72199833	72199562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72199600_72199800
ES.35549.2	chr9	-	3783	3	Antisense	novelGene_ENSMUSG00000038535.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACTCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	72208665	72201566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72202603_72203252_72203316_72205981
ES.35549.3	chr9	-	7397	7	Antisense	novelGene_ENSMUSG00000038535.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72221578	72201567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72202603_72203252_72203316_72205981_72206131_72208982_72209047_72209146_72209287_72215230_72219529_72219930
ES.35549.4	chr9	-	7070	1	Antisense	novelGene_ENSMUSG00000038535.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72208665	72201595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72201600_72208700
ES.35549.5	chr9	-	6422	2	Antisense	novelGene_ENSMUSG00000038535.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72208665	72201595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72202605_72203252
ES.3555.1	chr10	-	3765	2	Intergenic	novelGene_2717	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	89692191	89688222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_89690462_89690665
ES.35550.1	chr9	-	281	1	Intergenic	novelGene_28930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72309367	72309086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72309100_72309400
ES.35551.1	chr9	+	320	1	Intergenic	novelGene_28931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTAAATGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	72318104	72318424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72318100_72318400
ES.35551.10	chr9	+	4316	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13826	1	13826	-1	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACATTGTTCTTTATAT	1866	False	NA	NA	False	AATAAA	-18	NA	72359642	72369306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72360121_72364059_72364186_72365594
ES.35551.11	chr9	+	3597	4	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	13842	2	intron_retention	FALSE	non_canonical	0	0	junction_3	46.4494946749214	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTTCTTTATATTAC	1882	False	NA	NA	False	AATAAA	-21	NA	72359658	72369309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72360121_72364059_72364186_72365594_72366157_72366862
ES.35551.12	chr9	+	163	1	Intergenic	novelGene_28933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	72376610	72376773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72376600_72376800
ES.35551.13	chr9	+	752	1	Intergenic	novelGene_28934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGACAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	72388257	72389009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72388300_72389000
ES.35551.14	chr9	+	179	1	Intergenic	novelGene_28935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAACAAAA	3737	False	NA	NA	False	NA	NA	NA	72393680	72393859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72393700_72393900
ES.35551.15	chr9	+	176	1	Intergenic	novelGene_28936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGACTGTGAAGA	480	False	NA	NA	False	NA	NA	NA	72394829	72395005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72394800_72395000
ES.35551.16	chr9	+	179	1	Intergenic	novelGene_28937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATCTGCATCTTTGCT	NA	False	NA	5	True	NA	NA	NA	72425159	72425338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72425200_72425300
ES.35551.17	chr9	+	158	2	Intergenic	novelGene_28939	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	72425160	72549470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72425306_72549457
ES.35551.18	chr9	+	177	2	Intergenic	novelGene_28938	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	72425160	72506819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72425306_72506787
ES.35551.19	chr9	+	8054	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-211	15	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAATGTGCCACATCTC	466	False	NA	NA	False	CATAAA	-11	NA	72439310	72530234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.2	chr9	+	176	2	Antisense	novelGene_ENSMUSG00002076294.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATCTGCATCTTTGCT	NA	False	NA	5	True	NA	NA	NA	72318105	72425338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_72318133_72425189
ES.35551.20	chr9	+	2195	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	-705	64	-210	-1	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	467	False	NA	8	True	AATAAA	-17	NA	72439311	72519704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.21	chr9	+	5438	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-196	2638	-196	-2638	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGTCTTTATTTTGTA	481	False	NA	11	True	AGTAAA	-24	NA	72439325	72527473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.22	chr9	+	5030	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-191	-2884	intron_retention	FALSE	canonical	3	23	junction_1	67.8802504051195	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATGTATTGTATTTGT	486	False	NA	NA	False	GATAAA	-36	NA	72439330	72527227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.23	chr9	+	1246	7	ISM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-547	1990	-178	-1990	5prime_fragment	FALSE	canonical	3	107	junction_1	39.47573094109	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAATGCATTCTGTTCA	499	False	NA	NA	False	AATAAA	-16	NA	72439343	72517715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585
ES.35551.24	chr9	+	2082	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-543	-82	-174	19	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTAGTTTGTTGT	503	False	NA	91	True	AATAAA	-22	NA	72439347	72519787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.25	chr9	+	5250	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-172	-2642	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTGGGTCTTTATTT	505	False	NA	7	True	AGTAAA	-20	NA	72439349	72527469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.26	chr9	+	8103	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-99	-124	-99	16	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATGTGCCACATCTCT	578	False	NA	NA	False	CATAAA	-12	NA	72439422	72530235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.27	chr9	+	7339	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-83	-1	intron_retention	FALSE	canonical	1	1	junction_1	73.0156418215801	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGATGTTAAGATAATTT	594	False	NA	NA	False	ATTAAA	-20	NA	72439438	72530110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439474_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.28	chr9	+	7707	7	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-42	-9	intron_retention	FALSE	canonical	2	2	junction_2	80.4979295800002	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACTGACTGGATGTTAA	635	False	NA	NA	False	ATTAAA	-12	NA	72439479	72530102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72440263_72484320_72484355_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.3	chr9	+	2044	11	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	-42	-3444	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.7927228926065	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGTCATTTTTATTTA	NA	False	NA	10	True	ATTAAA	-22	NA	72345250	72365863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72345397_72345724_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ES.35551.30	chr9	+	10958	9	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-33	-3	intron_retention	FALSE	canonical	3	98	junction_8	47.1082529924428	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGATGTTAAGATAAT	644	False	NA	NA	False	ATTAAA	-18	NA	72439488	72530108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72522615_72523918
ES.35551.31	chr9	+	7752	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	-33	-4	intron_retention	FALSE	canonical	3	23	junction_1	67.8802504051195	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTGGATGTTAAGATAA	644	False	NA	NA	False	ATTAAA	-17	NA	72439488	72530107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.32	chr9	+	1758	7	NIC	ENSMUSG00000037674.16	novel	1457	8	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	79.750478925765	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTGATTACCTGGTTT	661	False	NA	8	True	AATAAA	-17	NA	72439505	72519704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.35	chr9	+	2937	8	ISM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-12	6259	-12	4084	5prime_fragment	FALSE	canonical	3	93	junction_7	42.3758691440575	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACACATGTACTGTTGTA	665	False	NA	NA	False	AATAAA	-12	NA	72439509	72523852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318
ES.35551.36	chr9	+	9036	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-12	-1144	-12	1036	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTCCAACATCTCACA	665	False	NA	NA	False	AATAAA	-32	NA	72439509	72531255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.38	chr9	+	1667	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-378	168	-9	-168	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCTTTTTTATAGCTG	668	False	NA	NA	False	AATAAA	-18	NA	72439512	72519537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.4	chr9	+	2061	11	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	-22	-3452	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	25.6766430827708	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCAGAATTAGTCATT	NA	False	NA	2	True	ATTAAA	-14	NA	72345270	72365855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72345397_72345679_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ES.35551.40	chr9	+	6946	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	-9	943	-9	-943	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGAGACTGGAGGATTT	668	False	NA	NA	False	TATAAA	-37	NA	72439512	72529168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.42	chr9	+	1477	8	NNC	ENSMUSG00000037674.16	novel	1457	8	NA	NA	-1	-351	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	89.271198820087	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGTCTGTGACCAAAG	679	False	NA	NA	False	AATAAA	-25	NA	72439523	72519354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515026_72517588_72517671_72518902
ES.35551.43	chr9	+	5404	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	7	-2306	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGCTGCACTAAAATT	687	False	NA	NA	False	AATAAA	-17	NA	72439531	72527805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.45	chr9	+	7688	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	8	-14	intron_retention	FALSE	canonical	0	0	junction_3	70.6007729122173	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTATACTGACTGGAT	688	False	NA	NA	False	ATTAAA	-7	NA	72439532	72530097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499039_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.48	chr9	+	5112	11	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	9	-2648	intron_retention	FALSE	canonical	1	1	junction_9	82.9918670714185	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAGAGCAGTCTGGGTCT	689	False	NA	1	True	AGTAAA	-14	NA	72439533	72527463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72521782_72521835_72522318_72522615_72523918
ES.35551.49	chr9	+	5555	9	NNC	ENSMUSG00000037674.16	novel	7988	9	NA	NA	10	-2311	intron_retention	FALSE	non_canonical	0	0	junction_5	75.4652237789036	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGTAAAAGCTGCACTA	690	False	NA	NA	False	AATAAA	-12	NA	72439534	72527800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515025_72517589_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.5	chr9	+	1881	11	NNC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	-12	-3445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9859222558726	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTAGTCATTTTTATTT	NA	False	NA	9	True	ATTAAA	-21	NA	72345280	72365862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72345397_72345856_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ES.35551.50	chr9	+	4516	5	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	11	-2644	intron_retention	FALSE	canonical	0	0	junction_4	90.7479338607772	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTCTGGGTCTTTAT	691	False	NA	5	True	AGTAAA	-18	NA	72439535	72527467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72523918
ES.35551.51	chr9	+	7400	9	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	15	-6	intron_retention	FALSE	canonical	0	0	junction_8	72.6962860124229	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGACTGGATGTTAAGAT	695	False	NA	NA	False	ATTAAA	-15	NA	72439539	72530105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72523918
ES.35551.53	chr9	+	7909	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	17	-3	intron_retention	FALSE	canonical	1	1	junction_8	86.4831390117943	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGGATGTTAAGATAAT	697	False	NA	NA	False	ATTAAA	-18	NA	72439541	72530108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72521782_72521835_72522318_72522615_72523918
ES.35551.54	chr9	+	8830	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	31	1036	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTCCAACATCTCACA	711	False	NA	NA	False	AATAAA	-32	NA	72439555	72531255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.56	chr9	+	7732	10	NNC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	49	-5	intron_retention	FALSE	canonical	1	2	junction_9	71.9898826910875	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTGGATGTTAAGATA	729	False	NA	NA	False	ATTAAA	-16	NA	72439573	72530106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522684_72523918
ES.35551.57	chr9	+	1482	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	-90	65	-90	-65	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATGTGCTAGGCTCC	956	False	NA	-56	True	NA	NA	NA	72439800	72519640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.58	chr9	+	1193	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	71	290	71	-227	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTTTAATCTACTTTTC	1243	False	NA	NA	False	AATAAA	-24	NA	72440087	72519478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ES.35551.59	chr9	+	4715	1	Intergenic	novelGene_28942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAATACAACAAAGTAAAG	4339	False	NA	NA	False	NA	NA	NA	72453045	72457760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72453000_72457800
ES.35551.6	chr9	+	5262	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	-10	-2	-1	2	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTTCTTTATATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	72345806	72369309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ES.35551.60	chr9	+	7104	7	ISM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	59510	2	-7848	-2	3prime_fragment	FALSE	canonical	3	93	junction_5	50.5162240165364	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGATGTTAAGATAATT	6977	False	NA	NA	False	ATTAAA	-19	NA	72499031	72530109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ES.35551.61	chr9	+	7179	4	NNC	ENSMUSG00000037674.16	novel	5521	6	NA	NA	1798	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	99.9911107160143	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATTGACTGATTAC	NA	False	NA	1	True	AATAAA	-10	NA	72508677	72519697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72509636_72509680_72515022_72517585_72517671_72518902
ES.35551.62	chr9	+	4072	1	ISM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	85248	1270	7099	-1270	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGCTCAGAGGTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	72524769	72528841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72524800_72528800
ES.35551.63	chr9	+	268	1	Intergenic	novelGene_28947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATTTAAAAAACA	2484	False	NA	NA	False	AATAAA	-11	NA	72540230	72540498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72540200_72540500
ES.35551.7	chr9	+	1202	7	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	42	-3451	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	33.4535332795938	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAGAATTAGTCATTT	NA	False	NA	3	True	ATTAAA	-15	NA	72345858	72365856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72359862_72360121_72364059_72364186_72365594
ES.35551.8	chr9	+	4638	7	NIC	ENSMUSG00000032221.15	novel	5250	10	NA	NA	53	-4	intron_retention	FALSE	canonical	2	4	junction_4	33.4535332795938	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAACATTGTTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	72345869	72369303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72359862_72360121_72364059_72364186_72365594
ES.35551.9	chr9	+	916	3	ISM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13776	3451	13776	-3451	3prime_fragment	FALSE	canonical	3	85	junction_1	11.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCAGAATTAGTCATTT	1816	False	NA	3	True	ATTAAA	-15	NA	72359592	72365856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72360121_72364059_72364186_72365594
ES.35552.1	chr9	+	177	1	Intergenic	novelGene_28949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAGAGAGAGAGAGG	1434	False	NA	NA	False	NA	NA	NA	72552558	72552735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72552600_72552700
ES.35553.1	chr9	+	182	1	Intergenic	novelGene_28950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAGAGAGAAAGAA	2569	False	NA	NA	False	NA	NA	NA	72553693	72553875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72553700_72553900
ES.35554.1	chr9	+	207	1	Intergenic	novelGene_28951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGAAACACTGTCACT	6967	False	NA	NA	False	NA	NA	NA	72558091	72558298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72558100_72558300
ES.35555.1	chr9	+	5391	29	NNC	ENSMUSG00000032216.16	novel	4034	9	NA	NA	-354	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.560943449088	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569273	72657134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569434_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.10	chr9	+	3516	10	FSM	ENSMUSG00000032216.16	ENSMUST00000184450.8	3329	10	-184	-3	-48	3	multi-exon	FALSE	non_canonical	0	0	junction_1	906.918361033807	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCGTTAGTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	72569579	72628075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499
ES.35555.102	chr9	+	2660	8	NNC	ENSMUSG00000032216.16	novel	3329	10	NA	NA	1	18129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1436.06042735687	2823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAGTTACATTGCCT	NA	False	NA	NA	False	NA	NA	NA	72569720	72597559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72594531_72594612_72595565
ES.35555.104	chr9	+	4985	24	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	602.110688879973	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569720	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.109	chr9	+	5328	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-6	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	762.872544084868	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGTGGCTCCGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	72569720	72657128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.11	chr9	+	5692	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.958791222387	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569579	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72570393_72570540_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.110	chr9	+	3698	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGAGTAGTTCAATG	NA	False	NA	18	True	TATAAA	-15	NA	72569720	72655441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644056_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.115	chr9	+	3705	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.038413389925	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGAGTAGTTCAATG	NA	False	NA	18	True	TATAAA	-15	NA	72569720	72655441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584668_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.118	chr9	+	5379	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.681939732762	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569722	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625634_72628573_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.119	chr9	+	5388	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569723	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644065_72644154_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.12	chr9	+	5507	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-47	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	897.177726233203	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569580	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617819_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633794_72638190_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.120	chr9	+	3675	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	4	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.958791222387	3458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCATGCCGTGAAGAACC	NA	False	NA	-96	True	NA	NA	NA	72569723	72655260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72570393_72570540_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.124	chr9	+	5377	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.096332165729	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAAGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	72569727	72657123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638670_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.125	chr9	+	3662	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	8	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	760.261723038288	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569727	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.126	chr9	+	5159	27	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	573.004989032051	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569727	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.128	chr9	+	3526	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	9	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGCCGTGAAGAACCG	NA	False	NA	-95	True	NA	NA	NA	72569728	72655261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644074_72644157_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.129	chr9	+	5376	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	747.841863501986	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569730	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653752_72654407
ES.35555.130	chr9	+	6129	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.567105794885	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569730	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650057_72650101_72650919_72653688_72653762_72654407
ES.35555.131	chr9	+	5367	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.503410392977	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAAGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	72569730	72657123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628683_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.134	chr9	+	3874	12	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	11	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	850.9930514133	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569730	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.138	chr9	+	5482	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	882.517717667822	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569730	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577242_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72597960_72598066_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.140	chr9	+	3706	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	11	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.110439853649	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGTTCAATGCATAATT	NA	False	NA	25	True	TATAAA	-22	NA	72569730	72655448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638187_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.141	chr9	+	5631	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.094820689172	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGTGGCTCCGTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	72569730	72657129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72573688_72573929_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.142	chr9	+	5428	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.435727643693	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569731	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593440_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.143	chr9	+	3649	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.574419219986	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569731	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625547_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.145	chr9	+	6789	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_1	764.850997260887	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569731	72657134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646326_72646418_72646736_72646811_72647449_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.148	chr9	+	5415	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.681939732762	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569731	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628552_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.15	chr9	+	5388	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-19	-10	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	761.568164110807	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569608	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.155	chr9	+	2526	27	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	104	6285	12	-3586	5prime_fragment	FALSE	non_canonical	0	0	junction_1	566.373708354116	3334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACGCTTACTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	72569731	72650849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821
ES.35555.156	chr9	+	5308	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	912.81831924574	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569731	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628997_72633748_72633794_72638181_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.158	chr9	+	5356	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.125100692589	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569731	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642511_72643975_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.159	chr9	+	3704	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569732	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638495_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.16	chr9	+	3798	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	747.841863501986	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569613	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653745_72654407
ES.35555.160	chr9	+	5431	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	13	46804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	884.373143708425	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGTAGTGAGATGGTTC	NA	False	NA	NA	False	AATAGA	-17	NA	72569732	72703938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617834_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407_72657137_72703915
ES.35555.161	chr9	+	4769	21	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	13	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	638.501260766179	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569732	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.162	chr9	+	5361	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.047398466889	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569732	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646381_72646722_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.164	chr9	+	5177	26	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	13	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	791.406662595154	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGGCTCCGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	72569732	72657130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.17	chr9	+	3272	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	38	2189	38	400	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTGCCTAGTGTACCT	NA	False	NA	NA	False	NA	NA	NA	72569665	72654945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.171	chr9	+	5444	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	15	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	883.785213951628	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAAGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	72569734	72657123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72582054_72582118_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.172	chr9	+	3181	10	FSM	ENSMUSG00000032216.16	ENSMUST00000184450.8	3329	10	-29	177	15	-177	multi-exon	FALSE	non_canonical	0	0	junction_1	906.918361033807	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTACTGCCTGCCA	NA	False	NA	NA	False	ATTAAA	-14	NA	72569734	72627895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499
ES.35555.175	chr9	+	3779	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	15	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	563.145686720478	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569734	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.176	chr9	+	5289	27	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1036.64112806813	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569734	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644096_72646326_72646406_72646745_72646842_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.178	chr9	+	5545	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	879.820374057353	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGCTCCGTTACCTA	NA	False	NA	NA	False	AATAAA	-25	NA	72569735	72657132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653316_72653473_72653688_72653762_72654407
ES.35555.180	chr9	+	3828	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	739.082313327792	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAACCAAAGAGTAG	NA	False	NA	11	True	TATAAA	-8	NA	72569739	72655434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72570398_72570540_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.182	chr9	+	5275	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.560943449088	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGGCTCCGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	72569741	72657130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569788_72577231_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.184	chr9	+	2726	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	119	2654	-17	45	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACACAGGGCTTTGATGG	NA	False	NA	NA	False	GATAAA	-19	NA	72569746	72654480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.186	chr9	+	2421	26	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	133	7140	-3	-4441	5prime_fragment	FALSE	non_canonical	0	0	junction_1	577.412468171584	3311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGCTACAGCATGAA	NA	False	NA	NA	False	NA	NA	NA	72569760	72649994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934
ES.35555.187	chr9	+	3478	27	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-5	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	777.694571251366	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAACCAAAGAGTAGT	NA	False	NA	12	True	TATAAA	-9	NA	72569763	72655435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.188	chr9	+	4137	15	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1026.62325671324	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569763	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584655_72642301_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.19	chr9	+	5439	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.047398466889	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGGCTCCGTTACC	NA	False	NA	NA	False	AATAAA	-23	NA	72569674	72657130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646745_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.190	chr9	+	5309	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	739.947650556986	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569763	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407_72654902_72654954
ES.35555.195	chr9	+	5335	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.776923755488	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569779	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632309_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.196	chr9	+	5075	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	16	3	intron_retention	FALSE	non_canonical	0	0	junction_1	563.387045434098	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAGTAGTTCAATGCA	NA	False	NA	20	True	TATAAA	-17	NA	72569787	72655443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.198	chr9	+	1587	7	NNC	ENSMUSG00000032216.16	novel	3329	10	NA	NA	26	16427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1369.92620441962	2823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGGTTCTGTAC	NA	False	NA	NA	False	NA	NA	NA	72569797	72595857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72594779
ES.35555.200	chr9	+	3594	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.038413389925	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAGAGTAGTTCAAT	NA	False	NA	17	True	TATAAA	-14	NA	72569814	72655440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584652_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.203	chr9	+	7167	29	NNC	ENSMUSG00000032216.16	novel	4034	9	NA	NA	-867	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.038413389925	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	4281	False	NA	NA	False	AATAAA	-17	NA	72575083	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72575945_72576146_72577399_72578511_72578586_72584596_72584674_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.204	chr9	+	5313	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1278	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	750.883095740867	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	6437	False	NA	NA	False	AATAAA	-26	NA	72577239	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649744_72649834_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.205	chr9	+	6629	27	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1291	-10	intron_retention	FALSE	canonical	3	2430	junction_6	168.853499927807	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	6450	False	NA	NA	False	AATAAA	-17	NA	72577252	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.206	chr9	+	5206	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1330	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	557.772709140317	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	6489	False	NA	NA	False	AATAAA	-26	NA	72577291	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72577399_72578511_72578586_72584596_72584676_72584774_72584818_72593312_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.207	chr9	+	5676	3	NNC	ENSMUSG00000032216.16	novel	660	8	NA	NA	7027	9533	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1335.5	2806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATGCTTAAACTTTAGG	1601	False	NA	NA	False	NA	NA	NA	72582988	72588963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72584676_72584774_72587602_72587801
ES.35555.208	chr9	+	4994	26	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	14966	1	8632	-1	3prime_fragment	FALSE	canonical	3	2430	junction_4	169.99300691499	3584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	3206	False	NA	NA	False	AATAAA	-26	NA	72584593	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.210	chr9	+	4905	25	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	15145	10	8811	-10	3prime_fragment	FALSE	canonical	3	2430	junction_3	169.408345426074	3584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	3385	False	NA	NA	False	AATAAA	-17	NA	72584772	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.211	chr9	+	173	1	Intergenic	novelGene_28954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2802	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6222	False	NA	NA	False	NA	NA	NA	72587609	72587782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72587600_72587800
ES.35555.212	chr9	+	2334	1	Intergenic	novelGene_28956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACACACTGTGACCTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	72607911	72610245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72607900_72610200
ES.35555.213	chr9	+	4820	23	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	46765	1	15672	-1	3prime_fragment	FALSE	canonical	3	2430	junction_1	163.599162437994	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72616392	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.214	chr9	+	3240	22	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	47975	1686	16882	8	3prime_fragment	FALSE	canonical	3	2632	junction_6	139.251269652284	3443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGTTCAATGCATAATT	NA	False	NA	25	True	TATAAA	-22	NA	72617602	72655448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.216	chr9	+	4766	20	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	24619	1	-21414	-1	3prime_fragment	FALSE	canonical	3	2632	junction_4	132.998302532229	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	4893	False	NA	NA	False	AATAAA	-26	NA	72625339	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.217	chr9	+	10153	18	NIC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-21124	-10	intron_retention	FALSE	canonical	3	2632	junction_3	132.996916997334	3560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	5183	False	NA	NA	False	AATAAA	-17	NA	72625629	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72653762_72654407
ES.35555.218	chr9	+	4320	18	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	28056	4	-17977	-4	3prime_fragment	FALSE	canonical	3	2632	junction_2	139.579844074896	3546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGGCTCCGTTACC	8330	False	NA	NA	False	AATAAA	-23	NA	72628776	72657130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.22	chr9	+	8824	8	NNC	ENSMUSG00000032216.16	novel	3329	10	NA	NA	-38	-15827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1436.06042735687	2823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTATATTTACTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	72569681	72603684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72594531_72594612_72595565
ES.35555.220	chr9	+	6585	16	Fusion	ENSMUSG00000032216.16_ENSMUSG00000102411.2	novel	1368	5	NA	NA	-5815	-10	intron_retention	FALSE	non_canonical	0	0	junction_1	992.503263918507	3546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	9160	False	NA	NA	False	AATAAA	-17	NA	72629606	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_72630198_72636033_72636817_72637034_72638256_72638503_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.221	chr9	+	177	1	Intergenic	novelGene_28957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2940	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	9847	False	NA	NA	False	NA	NA	NA	72630293	72630470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72630300_72630500
ES.35555.222	chr9	+	4110	1	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-16129	6662	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2978	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGTATACCCACATAC	NA	False	NA	NA	False	NA	NA	NA	72630624	72634734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72630600_72634700
ES.35555.223	chr9	+	6256	15	NIC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-15036	-10	intron_retention	FALSE	canonical	3	2632	junction_1	150.220127595119	3541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72631717	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72632365_72633692_72633813_72638183_72638256_72638503_72638719_72639873_72639940_72642291_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.224	chr9	+	6091	15	NIC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-14425	-10	intron_retention	FALSE	canonical	3	2645	junction_8	119.998214272428	3541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72632328	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688
ES.35555.225	chr9	+	5270	17	NNC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-14085	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	961.104847216863	3541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72632668	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653316_72653473_72653688_72653762_72654407
ES.35555.226	chr9	+	4373	13	NNC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-13097	-2604	intron_retention	FALSE	non_canonical	0	0	junction_12	800.473032892982	3294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCTTTGTTGATAGACA	NA	False	NA	NA	False	AATAAA	-23	NA	72633656	72651831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72648970_72649934_72650057_72650101
ES.35555.228	chr9	+	4086	15	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	35675	1673	-10358	21	3prime_fragment	FALSE	canonical	3	2645	junction_7	134.002760404099	3425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTATGAATTTGT	NA	False	NA	38	True	TATAAA	-35	NA	72636395	72655461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.229	chr9	+	203	1	FSM	ENSMUSG00000102411.2	ENSMUST00000194508.2	2749	1	1407	1139	1407	-1139	mono-exon	FALSE	NA	NA	NA	NA	NA	3024	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTATTTTAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	72636828	72637031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72636800_72637000
ES.35555.230	chr9	+	5135	14	NIC	ENSMUSG00000032216.16	novel	6035	21	NA	NA	-8589	-10	intron_retention	FALSE	canonical	3	2645	junction_6	130.406692027073	3494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72638164	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72638256_72638503_72638559_72638659_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.231	chr9	+	1428	1	Intergenic	novelGene_28958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3022	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCACTTCCACACTGG	NA	False	NA	NA	False	AAAAAG	-4	NA	72640577	72642005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72640600_72642000
ES.35555.232	chr9	+	179	1	Intergenic	novelGene_28959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3022	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAGGTCATAA	NA	False	NA	NA	False	NA	NA	NA	72640652	72640831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72640700_72640800
ES.35555.233	chr9	+	2024	11	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	41568	1698	-4465	-4	3prime_fragment	FALSE	canonical	3	2645	junction_3	143.820200250173	3373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72642288	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.235	chr9	+	5075	8	ISM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	43821	1	-2212	-1	3prime_fragment	FALSE	canonical	3	2794	junction_5	120.222243179463	3490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72644541	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.236	chr9	+	5750	2	FSM	ENSMUSG00000032216.16	ENSMUST00000184287.2	779	2	-2383	-2588	2012	-1	multi-exon	FALSE	canonical	3	3114	junction_1	0	3489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72650737	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72653762_72654407
ES.35555.237	chr9	+	6602	1	Genic_Genomic	ENSMUSG00000032216.16	novel	NA	NA	NA	NA	-2129	459	mono-exon	FALSE	NA	NA	NA	NA	NA	3488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAACTTTAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	72650991	72657593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_72651000_72657600
ES.35555.238	chr9	+	4102	2	FSM	ENSMUSG00000032216.16	ENSMUST00000184287.2	779	2	-275	-3048	-275	459	multi-exon	FALSE	canonical	3	3114	junction_1	0	3487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAACTTTAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	72652845	72657593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72653762_72654407
ES.35555.239	chr9	+	180	1	Intergenic	novelGene_28961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATGGA	1404	False	NA	NA	False	NA	NA	NA	72672664	72672844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72672700_72672800
ES.35555.25	chr9	+	3829	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.094820689172	3472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569686	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72573688_72573776_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.27	chr9	+	4737	21	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	869.070335185824	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569686	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72625578_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638182_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.28	chr9	+	5392	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	766.580259936658	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569686	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578624_72584780_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.3	chr9	+	5408	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-128	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	739.947650556986	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569499	72657134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569518_72569736_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.33	chr9	+	3808	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-31	88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.068778441082	3478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTTAATCAAAAGTCA	NA	False	NA	105	True	NA	NA	NA	72569688	72655528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648933_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.36	chr9	+	5394	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.068778441082	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569695	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648945_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.37	chr9	+	5405	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-24	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569695	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644055_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.39	chr9	+	3358	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	72	2069	-20	-375	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATTTCACGTTTGTTA	NA	False	NA	17	True	TTTAAA	-24	NA	72569699	72655065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.4	chr9	+	5616	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	-117	0	-117	0	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569510	72657134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.40	chr9	+	3316	24	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-18	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	602.110688879973	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569701	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.41	chr9	+	5126	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-18	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	562.504781872678	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569701	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.42	chr9	+	2875	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	75	2549	-17	40	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCCAGATAGTTTC	NA	False	NA	NA	False	AAAACA	-13	NA	72569702	72654585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.45	chr9	+	5411	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.574419219986	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569707	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619542_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.46	chr9	+	5243	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-11	-10	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	561.400925033312	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569708	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.47	chr9	+	2800	10	FSM	ENSMUSG00000032216.16	ENSMUST00000184450.8	3329	10	-55	584	-11	-149	multi-exon	FALSE	non_canonical	0	0	junction_1	906.918361033807	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAAAAATTATATTTTA	NA	False	NA	NA	False	NA	NA	NA	72569708	72627488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499
ES.35555.48	chr9	+	5350	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-10	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	907.461318126424	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569709	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632362_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.50	chr9	+	5185	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-10	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGGTATTTGTTTTCG	NA	False	NA	NA	False	AATGAA	-28	NA	72569709	72656901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644154_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.53	chr9	+	5465	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-3	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	999.677172623704	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569716	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616441_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72629934_72630004_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.54	chr9	+	5052	25	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	54	junction_1	579.308705604265	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569716	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.60	chr9	+	3727	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.045031955633	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACCAAAGAGTAGTTCAAT	NA	False	NA	17	True	TATAAA	-14	NA	72569717	72655440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617834_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.61	chr9	+	5415	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.560943449088	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569717	72657134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577227_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.62	chr9	+	3543	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	761.769107301882	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAAAGAGTAGTT	NA	False	NA	13	True	TATAAA	-10	NA	72569718	72655436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.65	chr9	+	5284	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	739.947650556986	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569718	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407_72656067_72656180
ES.35555.67	chr9	+	1313	10	FSM	ENSMUSG00000032216.16	ENSMUST00000184450.8	3329	10	-45	2061	-1	-1626	multi-exon	FALSE	non_canonical	0	0	junction_1	906.918361033807	2919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAATTTTAGGCTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72569718	72626011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499
ES.35555.69	chr9	+	5606	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.958791222387	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569718	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72570393_72570593_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.70	chr9	+	8177	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	560.651032503208	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569718	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72653762_72654407
ES.35555.73	chr9	+	5516	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	739.947650556986	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569718	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72572048_72572158_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.76	chr9	+	5419	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	751.806419803092	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569718	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638491_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.77	chr9	+	5355	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	747.209939627111	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569718	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646792_72647482_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.78	chr9	+	1233	2	ISM	ENSMUSG00000032216.16	ENSMUST00000184737.2	1260	3	-1	1141	-1	-1122	5prime_fragment	FALSE	non_canonical	0	0	junction_1	0	2749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCTAAATTACTATGTG	NA	False	NA	NA	False	NA	NA	NA	72569718	72578289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72569896_72577233
ES.35555.8	chr9	+	5362	27	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	-50	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	777.694571251366	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569577	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.82	chr9	+	5375	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	752.567105794885	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569719	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577234_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650022_72650821_72650919_72653688_72653762_72654407
ES.35555.84	chr9	+	5397	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	553.560943449088	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569719	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577242_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.85	chr9	+	5416	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	747.841863501986	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569719	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654388
ES.35555.87	chr9	+	5389	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.560943449088	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569719	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569878_72577232_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.89	chr9	+	5367	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1010.5100569787	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAAGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	72569720	72657123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578524_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616449_72617780_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649932_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.9	chr9	+	3943	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	-50	1606	-50	88	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTTAATCAAAAGTCA	NA	False	NA	105	True	NA	NA	NA	72569577	72655528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.90	chr9	+	5336	28	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-10	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	762.486938879343	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569720	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.91	chr9	+	4668	21	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	872.458973247453	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAAAGCTGTGGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	72569720	72657123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72628835_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.93	chr9	+	5483	30	NNC	ENSMUSG00000032216.16	novel	5699	30	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	738.094820689172	3589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	72569720	72657124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72573688_72573776_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.94	chr9	+	5357	27	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	772.949703462548	3589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCCGTTACCTAA	NA	False	NA	NA	False	AATAAA	-26	NA	72569720	72657133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584846_72617734_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35555.96	chr9	+	1699	5	ISM	ENSMUSG00000032216.16	ENSMUST00000183375.8	660	8	-48	33531	1	6550	5prime_fragment	FALSE	non_canonical	0	0	junction_1	1214.2753754812	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTTTGTATGTGA	NA	False	NA	NA	False	NA	NA	NA	72569720	72585980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774
ES.35555.98	chr9	+	2982	28	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	1	342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	761.769107301882	3423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTAATGATTAGTATAC	NA	False	NA	NA	False	AAGAAA	-1	NA	72569720	72654887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619539_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ES.35556.1	chr9	-	178	1	Intergenic	novelGene_28932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	72336902	72336724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72336700_72336900
ES.35557.1	chr9	-	6517	2	NNC	ENSMUSG00000090626.10	novel	3904	11	NA	NA	16509	-1712	intron_retention	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGATTTTTACTTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	72366036	72359387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72364541_72364672
ES.35557.11	chr9	-	2655	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	136	3	-4	-3	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTTTGCTATTT	7872	False	NA	NA	False	NA	NA	NA	72399247	72367004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.12	chr9	-	3238	11	NNC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-9	-4	intron_retention	FALSE	non_canonical	0	0	junction_7	65.7237400031374	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAAGTTTGCTATT	7867	False	NA	NA	False	NA	NA	NA	72399252	72367005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391399_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.14	chr9	-	5401	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	0	-4	intron_retention	FALSE	canonical	3	143	junction_9	33.7967782816975	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAAGTTTGCTATT	7876	False	NA	NA	False	NA	NA	NA	72399243	72367005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.15	chr9	-	5049	12	NNC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_5	81.0275945242123	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAAGTTTGCTATT	7879	False	NA	NA	False	NA	NA	NA	72399240	72367005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388030_72388466_72388723_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.17	chr9	-	3552	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-13	66	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGGAAGCAAGACTTC	7863	False	NA	62	True	NA	NA	NA	72399256	72368290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.18	chr9	-	7449	12	NNC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-12	4	intron_retention	TRUE	non_canonical	0	0	junction_3	93.1502829121392	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGGAAGACAAAGCCAG	7864	False	NA	0	True	AATAAA	-17	NA	72399255	72368352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72383750_72383989_72385193_72385621_72388058_72388466_72388723_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.19	chr9	-	1288	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	132	1374	-8	9	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACAGAATGTTTGGG	7868	False	NA	-23	True	AATAAA	-23	NA	72399251	72368375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.20	chr9	-	1150	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-6	8	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAACAGAATGTTTGG	7870	False	NA	-24	True	AATAAA	-22	NA	72399249	72368376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.21	chr9	-	3372	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-7	3	intron_retention	FALSE	canonical	2	9	junction_5	66.6907363956019	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGTGAAATAAACAGAATG	7869	False	NA	-29	True	AATAAA	-17	NA	72399250	72368381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.22	chr9	-	7271	10	NNC	ENSMUSG00000090626.10	novel	3904	11	NA	NA	-14	2	intron_retention	FALSE	non_canonical	0	0	junction_3	68.7940206991176	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGGTGAAATAAACAGAAT	7862	False	NA	-30	True	AATAAA	-16	NA	72399257	72368382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72383750_72383990_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ES.35557.23	chr9	-	3885	2	ISM	ENSMUSG00000090626.10	ENSMUST00000183399.8	2676	3	9700	758	9700	1	3prime_fragment	FALSE	canonical	3	193	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	NA	False	NA	-31	True	AATAAA	-15	NA	72372845	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_72368561_72369137
ES.35557.24	chr9	-	3740	11	NNC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_3	92.4761590897892	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7879	False	NA	-31	True	AATAAA	-15	NA	72399240	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72371033_72371414_72380939_72381075_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.25	chr9	-	3426	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	1	intron_retention	FALSE	canonical	0	0	junction_5	66.8318038062718	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7868	False	NA	-31	True	AATAAA	-15	NA	72399251	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388030_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.26	chr9	-	1402	13	NNC	ENSMUSG00000090626.10	novel	1434	13	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1435200270772	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7863	False	NA	-31	True	AATAAA	-15	NA	72399256	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72381075_72383311_72383429_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.27	chr9	-	1929	12	ISM	ENSMUSG00000090626.10	ENSMUST00000183856.8	2054	13	233	-1	-13	1	intron_retention	FALSE	canonical	1	12	junction_2	76.6258485183494	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7863	False	NA	-31	True	AATAAA	-15	NA	72399256	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_72368561_72369137_72369273_72379386_72379924_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ES.35557.28	chr9	-	3872	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	143	junction_9	33.698005216267	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGGTGAAATAAACAGAA	7879	False	NA	-31	True	AATAAA	-15	NA	72399240	72368383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.29	chr9	-	2202	13	NNC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	-2	0	intron_retention	FALSE	canonical	1	2	junction_6	86.4398875905485	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7874	False	NA	-32	True	AATAAA	-14	NA	72399245	72368384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72388058_72388466_72388723_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.3	chr9	-	4910	12	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	2	-4	intron_retention	FALSE	canonical	1	12	junction_1	76.2853494811064	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTACTAATGTGTTTAA	7878	False	NA	NA	False	AATAAA	-19	NA	72399241	72365857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72369273_72379386_72379924_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.30	chr9	-	1342	13	NNC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	74.1366512297093	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCTGGTGAAATAAACAG	7879	False	NA	-33	True	AATAAA	-13	NA	72399240	72368385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72387281_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.31	chr9	-	3234	9	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	9	junction_4	83.7652038438396	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCTGGTGAAATAAACAG	7868	False	NA	-33	True	AATAAA	-13	NA	72399251	72368385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.32	chr9	-	3321	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	37	junction_2	59.6380026327567	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCTGGTGAAATAAACAG	7864	False	NA	-33	True	AATAAA	-13	NA	72399255	72368385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.33	chr9	-	1948	12	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	21	junction_5	58.5026664646243	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGACCTGGTGAAATAAAC	7869	False	NA	-35	True	AATAAA	-11	NA	72399250	72368387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.34	chr9	-	1209	11	ISM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	145	2017	0	189	5prime_fragment	FALSE	canonical	3	143	junction_10	32.9740807301735	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTGTGAAGTCACATCT	7881	False	NA	NA	False	CATAAA	-23	NA	72399238	72369018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.35	chr9	-	3386	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-3	184	intron_retention	FALSE	canonical	3	143	junction_9	33.7967782816975	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATACGTGTGAAGTCA	7873	False	NA	NA	False	CATAAA	-18	NA	72399246	72369023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.36	chr9	-	2087	12	NNC	ENSMUSG00000090626.10	novel	969	8	NA	NA	-9	6294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.4491202169273	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCAAGGTTGACACA	7867	False	NA	NA	False	AATAAA	-23	NA	72399252	72378724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72379213_72379293_72379924_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.37	chr9	-	3621	2	Genic_Genomic	ENSMUSG00000090626.10	novel	2805	13	NA	NA	119	6293	multi-exon	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTGCAAGGTTGACAC	NA	False	NA	NA	False	AATAAA	-22	NA	72382426	72378725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_72379214_72379293
ES.35557.38	chr9	-	4238	11	NNC	ENSMUSG00000090626.10	novel	969	8	NA	NA	1	6285	intron_retention	FALSE	non_canonical	0	0	junction_1	82.2100358837046	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGATATGTGCAAG	7882	False	NA	NA	False	AATAAA	-14	NA	72399237	72378733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72379214_72379293_72379924_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.39	chr9	-	1471	1	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	1875	5819	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTGCATTCATAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72380670	72379199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72379200_72380700
ES.35557.4	chr9	-	3793	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	140	-1139	0	-9	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTAAAGTACTAATGTG	7876	False	NA	NA	False	AATAAA	-14	NA	72399243	72365862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.40	chr9	-	3974	4	NNC	ENSMUSG00000090626.10	novel	475	6	NA	NA	-2228	1520	intron_retention	FALSE	non_canonical	0	0	junction_1	85.2538692507397	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAACCTTGAGATTTCTT	4152	False	NA	NA	False	AGTAAA	-22	NA	72389813	72383498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72383750_72383990_72385193_72385621_72388058_72389728
ES.35557.41	chr9	-	2105	10	NNC	ENSMUSG00000090626.10	novel	969	8	NA	NA	-7	1514	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.7707002780103	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTGAAACCTTGAGA	7869	False	NA	NA	False	AGTAAA	-16	NA	72399250	72383504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72383750_72383990_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.42	chr9	-	4697	8	NNC	ENSMUSG00000090626.10	novel	969	8	NA	NA	-2	1513	intron_retention	FALSE	non_canonical	0	0	junction_1	78.9546498611315	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATTGAAACCTTGAG	7879	False	NA	NA	False	AGTAAA	-15	NA	72399240	72383505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72383750_72383990_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.43	chr9	-	795	9	ISM	ENSMUSG00000090626.10	ENSMUST00000184557.8	1434	13	145	16583	0	-25	5prime_fragment	FALSE	canonical	3	143	junction_8	33.6368473552442	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGCTGTCATCAGTAG	7881	False	NA	NA	False	AATAAA	-18	NA	72399238	72385043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.44	chr9	-	1481	9	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-9	-26	intron_retention	FALSE	canonical	3	21	junction_2	67.7564572568549	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAGCTGTCATCAGTA	7867	False	NA	NA	False	AATAAA	-17	NA	72399252	72385044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72385193_72385621_72385705_72387205_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.45	chr9	-	3144	8	NNC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	2	-26	intron_retention	FALSE	canonical	0	0	junction_3	97.4325512383635	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAGCTGTCATCAGTA	7878	False	NA	NA	False	AATAAA	-17	NA	72399241	72385044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72385193_72385621_72388058_72388466_72388723_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.5	chr9	-	2518	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGCTATTTGTAGTGG	7881	False	NA	NA	False	NA	NA	NA	72399238	72366997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.6	chr9	-	4874	11	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-43	3	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGCTATTTGTAGTG	7833	False	NA	NA	False	NA	NA	NA	72399286	72366998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.7	chr9	-	5252	10	NIC	ENSMUSG00000090626.10	novel	2794	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	143	junction_9	33.698005216267	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTTGCTATTTGT	7880	False	NA	NA	False	NA	NA	NA	72399239	72367002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ES.35557.8	chr9	-	2833	12	NIC	ENSMUSG00000090626.10	novel	3904	11	NA	NA	0	-1	intron_retention	FALSE	canonical	1	2	junction_6	77.3403981763906	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGTTTGCTATTTGT	7881	False	NA	NA	False	NA	NA	NA	72399238	72367002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72387284_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ES.35557.9	chr9	-	5824	6	NNC	ENSMUSG00000090626.10	novel	3904	11	NA	NA	-63	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	92.4584230884347	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTTTGCTATTT	8017	False	NA	NA	False	NA	NA	NA	72385948	72367004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72368561_72369137_72369273_72380939_72382503_72382708_72383750_72383990_72385193_72385621
ES.35558.1	chr9	-	1309	3	NNC	ENSMUSG00000096986.3	novel	1191	3	NA	NA	1474	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTTGTCACTCATAA	NA	False	NA	NA	False	AATAAA	-11	NA	72437666	72425547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72426573_72429482_72429584_72437483
ES.35558.2	chr9	-	2444	2	NNC	ENSMUSG00000096986.3	novel	1191	3	NA	NA	1499	-1766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGCCAGGAAACAAAAATG	NA	False	NA	NA	False	NA	NA	NA	72437641	72427297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72429584_72437483
ES.35558.3	chr9	-	179	1	Intergenic	novelGene_28940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGAGAGAGGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	72430219	72430040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72430000_72430200
ES.35558.4	chr9	-	4035	1	Intergenic	novelGene_28941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGGCTGAACAAACC	NA	False	NA	NA	False	NA	NA	NA	72437657	72433622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72433600_72437700
ES.35559.1	chr9	-	177	1	Intergenic	novelGene_28943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTGTTAGAT	NA	False	NA	NA	False	NA	NA	NA	72459585	72459408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72459400_72459600
ES.3556.1	chr10	-	164	1	Intergenic	novelGene_2719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGGAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	89707799	89707635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_89707600_89707800
ES.35560.1	chr9	-	180	1	Intergenic	novelGene_28944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGTAAATCCCATA	NA	False	NA	NA	False	NA	NA	NA	72496871	72496691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72496700_72496900
ES.35561.1	chr9	-	164	1	Intergenic	novelGene_28945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	4720	False	NA	NA	False	NA	NA	NA	72506243	72506079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72506100_72506200
ES.35562.1	chr9	-	158	1	Intergenic	novelGene_28946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72512473	72512315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72512300_72512500
ES.35563.1	chr9	-	179	2	Antisense	novelGene_ENSMUSG00000064735.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATATATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72591302	72512631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72512686_72591177
ES.35563.10	chr9	-	178	1	Intergenic	novelGene_28955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	72591303	72591125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72591100_72591300
ES.35563.11	chr9	-	6531	3	Antisense	novelGene_ENSMUSG00000104066.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAAAGGTCCCACTGC	NA	False	NA	NA	False	NA	NA	NA	72632543	72622579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72628699_72628776_72628944_72632298
ES.35563.2	chr9	-	4689	2	NNC	ENSMUSG00000099051.2	novel	622	2	NA	NA	2596	5425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACACCAGTCTTTCATT	NA	False	NA	NA	False	NA	NA	NA	72521567	72515646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72517670_72518901
ES.35563.3	chr9	-	3403	1	Genic_Genomic	ENSMUSG00000099051.2_ENSMUSG00000098573.2	novel	NA	NA	NA	NA	618	-1576	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	72526184	72522781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_72522800_72526200
ES.35563.4	chr9	-	231	1	Intergenic	novelGene_28948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTAATCTTGTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	72544421	72544190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72544200_72544400
ES.35563.5	chr9	-	2134	22	Antisense	novelGene_ENSMUSG00000102411.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.63887656499994	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTCCGGGAGCGCGCT	NA	False	NA	NA	False	NA	NA	NA	72646365	72569734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72569895_72577232_72577399_72578511_72578584_72584594_72584674_72584772_72584805_72593337_72593395_72616391_72616444_72617758_72617820_72619446_72619547_72625497_72625667_72628582_72628699_72628776_72628944_72632298_72632364_72633691_72633811_72638181_72638254_72638501_72638559_72638659_72638719_72639873_72639936_72642287_72642530_72643958_72644068_72644152_72644226_72646320
ES.35563.6	chr9	-	1659	1	Intergenic	novelGene_28952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72572703	72571044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72571000_72572700
ES.35563.7	chr9	-	400	1	Intergenic	novelGene_28953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGCAAAAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	72574081	72573681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72573700_72574100
ES.35563.8	chr9	-	3640	2	Antisense	novelGene_ENSMUSG00000104066.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGGCAGTGCCCTGGGA	NA	False	NA	NA	False	NA	NA	NA	72632543	72573876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72575344_72630370
ES.35563.9	chr9	-	267	1	Antisense	novelGene_ENSMUSG00000032216.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATAGTTTTAATGCCAG	NA	False	NA	NA	False	NA	NA	NA	72576148	72575881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72575900_72576100
ES.35564.1	chr9	-	238	1	Intergenic	novelGene_28960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTGTGTGCCTGTGTC	NA	False	NA	NA	False	AATAAA	-9	NA	72666864	72666626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72666600_72666900
ES.35565.1	chr9	-	2347	3	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-2883	5481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	139	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGACTATAAAATGAT	4655	False	NA	NA	False	NA	NA	NA	72686390	72675863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72677901_72683328_72683532_72686283
ES.35565.2	chr9	-	199	1	Intergenic	novelGene_28962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72680631	72680432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72680400_72680600
ES.35565.3	chr9	-	1547	4	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-3512	484	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1.24721912892465	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGGTAGTTTGGGTTT	4026	False	NA	NA	False	NA	NA	NA	72687019	72680860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72681693_72683328_72683532_72686283_72686702_72686925
ES.35565.4	chr9	-	1663	5	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-3504	462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.22474487139159	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	4034	False	NA	NA	False	NA	NA	NA	72687011	72680882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72681693_72683328_72683532_72684043_72684190_72686283_72686702_72686925
ES.35565.5	chr9	-	5320	2	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-2851	462	intron_retention	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	4687	False	NA	NA	False	NA	NA	NA	72686358	72680882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72685714_72685869
ES.35565.6	chr9	-	4223	4	NNC	ENSMUSG00000098294.2	novel	527	2	NA	NA	-3850	226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.4142135623731	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCACACTTCCACTG	3688	False	NA	NA	False	NA	NA	NA	72687357	72681118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72681693_72683328_72685714_72685869_72686702_72686925
ES.35565.7	chr9	-	185	1	Intergenic	novelGene_28963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4119	False	NA	NA	False	NA	NA	NA	72686926	72686741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72686700_72686900
ES.35566.1	chr9	+	159	1	Intergenic	novelGene_28964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	72708975	72709134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72709000_72709100
ES.35567.1	chr9	+	8041	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	24	1083	24	-1083	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72714179	72823490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.10	chr9	+	6081	11	ISM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	49774	1083	49774	-1083	3prime_fragment	FALSE	canonical	3	17	junction_2	5.6	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72763929	72823490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.11	chr9	+	5831	12	NNC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	50054	-1083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.2205537495384	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72764209	72823490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72804536_72804567_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.12	chr9	+	5548	10	NIC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	50124	-1083	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	8.80656320908194	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72764279	72823490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.13	chr9	+	6649	10	NNC	ENSMUSG00000036030.10	novel	517	2	NA	NA	-38868	-59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.56846672960488	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTGTCTACATATTG	NA	False	NA	NA	False	AATAAA	-26	NA	72779040	72824514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72779207_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.14	chr9	+	210	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	-139	1370	-139	-1370	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGTTGTTTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	72796187	72796397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72796200_72796400
ES.35567.15	chr9	+	189	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	397	855	397	-855	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATATAAAGTATATCCAT	NA	False	NA	NA	False	NA	NA	NA	72796723	72796912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72796700_72796900
ES.35567.16	chr9	+	3971	9	ISM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	83934	2540	-19819	2446	3prime_fragment	FALSE	canonical	3	18	junction_1	4.69041575982343	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCATGGACTAAAGTAT	NA	False	NA	NA	False	AATAAA	-11	NA	72798089	72822033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.17	chr9	+	176	1	Intergenic	novelGene_28971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGCTTGGC	5547	False	NA	NA	False	NA	NA	NA	72812890	72813066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72812900_72813100
ES.35567.18	chr9	+	3189	2	NNC	ENSMUSG00000036030.10	novel	517	2	NA	NA	1480	-1083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCCTGGGCTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	72819388	72823490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72821668_72822580
ES.35567.2	chr9	+	9082	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	91	-25	91	25	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGCGTTTTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-42	NA	72714246	72824598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.3	chr9	+	7584	19	NIC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	176	-1085	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.03464719546263	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCACTCCTGGGCTGTGTG	NA	False	NA	NA	False	NA	NA	NA	72714331	72823488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72714815_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.4	chr9	+	1230	5	NNC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	222	-68754	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.1243556529821	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	72714377	72750833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72714815_72716736_72717040_72746940_72747090_72749976_72750122_72750637
ES.35567.5	chr9	+	1068	2	ISM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	268	107160	268	-102174	5prime_fragment	FALSE	canonical	3	28	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTTGTGTGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	72714423	72717413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72714815_72716736
ES.35567.6	chr9	+	1269	1	NIC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	402	-103761	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	72714557	72715826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72714600_72715800
ES.35567.7	chr9	+	8374	18	NNC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	407	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.26004683415428	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	72714562	72824573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72714815_72716736_72717040_72749976_72750085_72755653_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ES.35567.8	chr9	+	8162	20	NNC	ENSMUSG00000036030.10	novel	9148	20	NA	NA	543	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.5997420928441	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTATTGAAACTGC	NA	False	NA	NA	False	AATAAA	-13	NA	72714698	72824501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72714815_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762243_72762403_72764056_72764363_72766042_72766232_72798058_72798153_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820460_72820519
ES.35567.9	chr9	+	203	1	Intergenic	novelGene_28967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTTATGGCCCTCGA	480	False	NA	NA	False	NA	NA	NA	72748490	72748693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72748500_72748700
ES.35568.1	chr9	-	171	1	Intergenic	novelGene_28965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATGAGTAAAAAA	8636	False	NA	NA	False	NA	NA	NA	72717855	72717684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72717700_72717900
ES.35569.1	chr9	-	149	1	Intergenic	novelGene_28966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	72731752	72731603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72731600_72731800
ES.3557.1	chr10	+	352	1	Intergenic	novelGene_2720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGAAATTGCCACAC	NA	False	NA	NA	False	AGTAAA	-41	NA	89714111	89714463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_89714100_89714500
ES.35570.1	chr9	-	133	1	Intergenic	novelGene_28968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72759674	72759541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72759500_72759700
ES.35571.1	chr9	-	5778	1	Intergenic	novelGene_28969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGCTCGGCCTGG	NA	False	NA	NA	False	NA	NA	NA	72774153	72768375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72768400_72774200
ES.35572.1	chr9	-	159	1	Intergenic	novelGene_28970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	72794514	72794355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72794400_72794500
ES.35573.1	chr9	+	2335	3	FSM	ENSMUSG00000034910.6	ENSMUST00000038489.6	7916	3	-573	6154	-573	-6154	multi-exon	FALSE	canonical	2	7	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTGAAGCTTCAAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	72832353	72853309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72833243_72850201_72850288_72851949
ES.35573.2	chr9	+	4059	3	FSM	ENSMUSG00000034910.6	ENSMUST00000038489.6	7916	3	-171	4028	-171	-4028	multi-exon	FALSE	canonical	2	7	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGAAATGAAATGATAATG	NA	False	NA	NA	False	AATAAA	-15	NA	72832755	72855435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72833243_72850201_72850288_72851949
ES.35573.3	chr9	+	1315	1	NIC	ENSMUSG00000034910.6	novel	7916	3	NA	NA	184	-25038	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72833110	72834425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72833100_72834400
ES.35573.4	chr9	+	164	1	Intergenic	novelGene_28972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGCCAA	NA	False	NA	NA	False	NA	NA	NA	72840649	72840813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72840600_72840800
ES.35574.1	chr9	-	157	1	Intergenic	novelGene_28973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	72864626	72864469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72864500_72864600
ES.35575.1	chr9	+	6963	6	NIC	ENSMUSG00000092192.8	novel	1975	9	NA	NA	45	-229	intron_retention	FALSE	canonical	3	15	junction_5	3.286335345031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGCTTTGGTATAATA	9223	False	NA	NA	False	ATTAAA	-20	NA	72866111	72880114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_72866280_72867863_72868674_72869196_72871519_72872450_72872561_72876313_72879361_72879608
ES.35575.2	chr9	+	1938	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	46	-9	46	9	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTATTTTTTTAAGA	9224	False	NA	NA	False	AATAAA	-24	NA	72866112	72880355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
ES.35575.3	chr9	+	1740	9	NNC	ENSMUSG00000092192.8	novel	1975	9	NA	NA	46	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.32654142756038	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTGGCTTTGGTATA	9224	False	NA	NA	False	ATTAAA	-17	NA	72866112	72880111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72866280_72868539_72868674_72869196_72869423_72871372_72871519_72872126_72872321_72872450_72872561_72876313_72876468_72879254_72879361_72879608
ES.35575.4	chr9	+	1678	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	61	236	61	-233	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGATTGGCTTTGGTAT	9239	False	NA	NA	False	ATTAAA	-16	NA	72866127	72880110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
ES.35576.1	chr9	-	254	1	Intergenic	novelGene_28974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACGCAGGCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	72878636	72878382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72878400_72878600
ES.35577.1	chr9	-	901	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	7	-197	7	197	multi-exon	FALSE	canonical	3	81	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAATAAAAAAAAAATAA	NA	False	NA	NA	False	AAAACA	-6	NA	72892651	72886806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72887479_72892422
ES.35577.2	chr9	-	854	3	NNC	ENSMUSG00000086158.3	novel	711	2	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	3.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTTTTTTGTTTTT	NA	False	NA	-5	True	AATAAA	-23	NA	72892640	72887009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72887479_72891080_72891248_72892422
ES.35577.3	chr9	-	687	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	18	6	18	-6	multi-exon	FALSE	canonical	3	81	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTTTTTTGTTTTT	NA	False	NA	-5	True	AATAAA	-23	NA	72892640	72887009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72887479_72892422
ES.35577.4	chr9	-	996	3	NNC	ENSMUSG00000086158.3	novel	711	2	NA	NA	23	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAACACTTTTTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	72892635	72887013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72887479_72891080_72891399_72892422
ES.35578.1	chr9	+	5144	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-143	-2062	6	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCTCAAGTCTGGCG	NA	False	NA	NA	False	AATAAA	-23	NA	72892716	72923282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35578.10	chr9	+	2556	9	NNC	ENSMUSG00000034563.17	novel	2969	9	NA	NA	-18	-421	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	77.5353749910323	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGTGTATGTGTATG	NA	False	NA	NA	False	TTTAAA	-6	NA	72892841	72920792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72914674_72914702_72917578_72917695_72919211
ES.35578.12	chr9	+	4843	9	NNC	ENSMUSG00000034563.17	novel	2969	9	NA	NA	2	-5	intron_retention	FALSE	non_canonical	0	0	junction_8	60.4285476823662	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTCTCTCTCAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	72892861	72923277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920075_72920225
ES.35578.13	chr9	+	2956	9	NNC	ENSMUSG00000034563.17	novel	2877	8	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	77.5353749910323	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGAGACTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	72892862	72921213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72914674_72914702_72917578_72917695_72919211
ES.35578.14	chr9	+	3015	9	NNC	ENSMUSG00000034563.17	novel	2969	9	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.8549895377585	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAGACTGCTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	72892876	72921217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72911387_72911484_72912922_72913175_72917578_72917695_72919211
ES.35578.16	chr9	+	2979	10	NNC	ENSMUSG00000034563.17	novel	2839	10	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	2	junction_7	79.0074226861386	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTCTCTCAAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	72892899	72923278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72914674_72914702_72917578_72917695_72919211_72920609_72922613
ES.35578.17	chr9	+	2615	9	FSM	ENSMUSG00000034563.17	ENSMUST00000037977.15	3151	9	191	345	1	-5	multi-exon	FALSE	canonical	1	1	junction_8	60.1040764008565	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTCTCTCTCAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	72892901	72923277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920275_72922613
ES.35578.18	chr9	+	4895	7	ISM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	11796	11	11782	-11	intron_retention	FALSE	canonical	3	171	junction_5	3.09120616516523	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTAAAGGTCTCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	72904682	72923271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35578.2	chr9	+	2982	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-44	1	30	-1	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGACTGCTTTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	72892815	72921219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35578.3	chr9	+	2926	10	FSM	ENSMUSG00000034563.17	ENSMUST00000140675.8	2839	10	-68	-19	33	17	multi-exon	FALSE	canonical	3	12	junction_9	64.8245495335079	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATTTTTCTTTTGTGACT	NA	False	NA	24	True	NA	NA	NA	72892818	72923639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613_72922712_72923179
ES.35578.4	chr9	+	2539	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-28	428	-28	-421	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGTGTATGTGTATG	NA	False	NA	NA	False	TTTAAA	-6	NA	72892831	72920792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35578.5	chr9	+	2506	1	FSM	ENSMUSG00000034563.17	ENSMUST00000183672.2	2475	1	-35	4	-27	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72892832	72895338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892800_72895300
ES.35578.7	chr9	+	5198	9	NNC	ENSMUSG00000034563.17	novel	2969	9	NA	NA	-26	-5	intron_retention	FALSE	canonical	0	0	junction_2	78.5238817176023	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTCTCTCTCAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	72892833	72923277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72892956_72904683_72904753_72905385_72905562_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35578.8	chr9	+	3017	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	-53	5	-26	-5	multi-exon	FALSE	canonical	3	41	junction_8	47.1963981676568	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGTCTCTCTCAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	72892833	72923277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
ES.35578.9	chr9	+	5364	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	-26	-2399	-26	-1	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTAGAGTTGCCAATT	NA	False	NA	4	True	AATAAA	-28	NA	72892833	72923619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ES.35579.1	chr9	+	499	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	-5	2	-5	-2	multi-exon	FALSE	canonical	3	439	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTAAGTTATTTATAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72946994	72950059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72947148_72949713
ES.35579.2	chr9	+	3043	1	FSM	ENSMUSG00000098332.3	ENSMUST00000184319.2	2639	1	5	-409	5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTAAGTTATTTATAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72947016	72950059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72947000_72950100
ES.3558.1	chr10	+	3389	8	NNC	ENSMUSG00000058589.15	novel	2661	3	NA	NA	-20544	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.728431359084684	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAAGTAGCTATTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	89811860	89915323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_89811937_89869075_89869157_89878407_89878565_89885677_89885975_89905329_89905406_89906929_89907032_89909840_89909955_89912837
ES.35580.1	chr9	-	178	1	Intergenic	novelGene_28975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACTAAAATTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	72899282	72899104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72899100_72899300
ES.35581.1	chr9	-	3130	1	Antisense	novelGene_ENSMUSG00000089865.3_AS_novelGene_ENSMUSG00000034563.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAACCACCA	NA	False	NA	NA	False	NA	NA	NA	72919305	72916175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72916200_72919300
ES.35581.11	chr9	-	4072	9	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	43	345	intron_retention	FALSE	non_canonical	0	0	junction_3	26.3094564748115	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGCTATTATAGTAACA	NA	False	NA	NA	False	AATAAA	-16	NA	72946890	72920647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72930510_72930563_72939334_72939524_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.12	chr9	-	4231	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	46	-2084	-2	99	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGATTGGCTCAATTAAA	NA	False	NA	NA	False	ATTAAA	-43	NA	72946935	72920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.13	chr9	-	4126	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	30	78	intron_retention	FALSE	non_canonical	3	6	junction_5	16.9752761391384	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAACTATACTGAAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	72946903	72920914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.14	chr9	-	6236	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-18	3	intron_retention	FALSE	non_canonical	3	21	junction_3	13.6587694713351	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGGGCTTCACACTAAAG	NA	False	NA	NA	False	AATAAA	-35	NA	72946951	72920989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.15	chr9	-	4093	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	69	-1969	21	-16	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGCAGCTCCACATGA	NA	False	NA	NA	False	AATAAA	-16	NA	72946912	72921008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.16	chr9	-	4216	13	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	40	-19	intron_retention	FALSE	non_canonical	0	0	junction_3	22.673252719645	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGGGCAGCTCCACA	NA	False	NA	NA	False	AATAAA	-13	NA	72946893	72921011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72927329_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939490_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.17	chr9	-	3246	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	-10	-1043	-10	11	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCTTCTGGTTCCTCT	NA	False	NA	0	True	AATAAA	-24	NA	72946991	72921934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.18	chr9	-	3178	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-4	9	intron_retention	FALSE	non_canonical	1	2	junction_8	17.8033333307544	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946937	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939454_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.19	chr9	-	3668	14	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	-2	9	intron_retention	FALSE	non_canonical	0	0	junction_4	27.4866293477285	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946935	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72926932_72927451_72928166_72928259_72928567_72928633_72929556_72929615_72930510_72930563_72936847_72936989_72939334_72939490_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.2	chr9	-	6037	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	29	1981	intron_retention	FALSE	non_canonical	0	0	junction_5	17.8033333307544	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGAGGCTTCTCATTC	NA	False	NA	0	True	AATAAA	-23	NA	72946904	72919011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929724_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.20	chr9	-	5227	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	30	9	intron_retention	FALSE	non_canonical	2	2	junction_9	19.477047309611	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946903	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941860_72943985_72944104_72945904_72946041_72946743
ES.35581.21	chr9	-	3214	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-4	9	intron_retention	FALSE	non_canonical	1	1	junction_8	18.0408168989147	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946937	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939490_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.22	chr9	-	3049	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-4	9	intron_retention	FALSE	non_canonical	0	0	junction_6	19.0580691571838	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946937	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.23	chr9	-	3145	13	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	-4	9	intron_retention	FALSE	non_canonical	0	0	junction_12	17.5188390660518	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946985	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743_72946821_72946913
ES.35581.24	chr9	-	3241	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	14	9	intron_retention	FALSE	non_canonical	0	0	junction_3	22.9278422537583	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946919	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72927329_72927451_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.25	chr9	-	2901	10	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	21	9	intron_retention	FALSE	non_canonical	1	2	junction_4	16.3571255285137	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946912	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.26	chr9	-	3105	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	29	9	intron_retention	FALSE	non_canonical	3	6	junction_5	16.9752761391384	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946904	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.27	chr9	-	3356	14	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	29	9	intron_retention	FALSE	non_canonical	0	0	junction_3	26.3321973140225	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946904	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928166_72928259_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941219_72941327_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.28	chr9	-	3098	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-18	9	intron_retention	FALSE	non_canonical	3	4	junction_5	16.7982683090198	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCTTCTGGTTCCT	NA	False	NA	-2	True	AATAAA	-22	NA	72946999	72921936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929615_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.3	chr9	-	6078	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	78	-3963	30	1978	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCAAGAGGCTTCTCA	NA	False	NA	-3	True	AATAAA	-20	NA	72946903	72919014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.30	chr9	-	2610	8	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	29	5	intron_retention	FALSE	non_canonical	0	0	junction_2	19.1897081259508	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946904	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.31	chr9	-	2263	13	FSM	ENSMUSG00000079469.11	ENSMUST00000184035.8	3221	13	10	948	10	5	multi-exon	FALSE	non_canonical	3	4	junction_1	16.6088580783468	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946971	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72922474_72923430_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.32	chr9	-	2732	10	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	30	5	intron_retention	FALSE	non_canonical	1	2	junction_4	24.0005143977796	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946903	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72928567_72928633_72929556_72929615_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.33	chr9	-	5238	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	29	5	intron_retention	FALSE	non_canonical	3	21	junction_3	13.6587694713351	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946904	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.34	chr9	-	3384	14	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	29	5	intron_retention	FALSE	non_canonical	0	0	junction_5	25.8223333455419	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946904	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72927255_72927451_72928068_72928259_72928567_72928633_72929556_72929615_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.35	chr9	-	7324	11	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-1	5	intron_retention	FALSE	non_canonical	0	0	junction_5	24.7202346267182	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946982	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72931864_72936878_72936989_72939334_72939466_72941768_72941874_72943985_72944100_72945904_72946041_72946743
ES.35581.36	chr9	-	2175	13	NNC	ENSMUSG00000079469.11	novel	2079	13	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.5188390660518	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAAGTTGCTTCTGGT	NA	False	NA	-6	True	AATAAA	-18	NA	72946982	72921940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72922333_72923388_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.37	chr9	-	2175	12	NIC	ENSMUSG00000079469.11	novel	3221	13	NA	NA	-4	3	combination_of_known_splicesites	FALSE	non_canonical	3	4	junction_1	21.0469761868913	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATCAAGTTGCTTCTG	NA	False	NA	-8	True	AATAAA	-16	NA	72946937	72921942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72922474_72923430_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.38	chr9	-	2829	9	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	21	2	intron_retention	FALSE	non_canonical	0	0	junction_3	17.9891460330945	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAATCAAGTTGCTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	72946912	72921943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.39	chr9	-	2704	13	NNC	ENSMUSG00000079469.11	novel	6838	13	NA	NA	25	394	intron_retention	FALSE	non_canonical	0	0	junction_3	22.0353251747179	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGAGTTCAGTTTTCT	NA	False	NA	NA	False	AGTAAA	-17	NA	72946908	72922583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928068_72928259_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.4	chr9	-	4503	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	36	-2346	-12	361	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTTTTATGTAAACC	NA	False	NA	NA	False	AATAAA	-32	NA	72946945	72920631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.40	chr9	-	4591	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	32	393	intron_retention	FALSE	non_canonical	3	21	junction_3	13.6587694713351	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTAGAGTTCAGTTTTC	NA	False	NA	NA	False	AGTAAA	-16	NA	72946901	72922584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.41	chr9	-	2130	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	69	-6	21	6	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAGCAGGAAAAAAAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	72946912	72922971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.42	chr9	-	4043	12	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	22.948018874141	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCCCCCCAGCAGGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	72946902	72922978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72927451_72928567_72928633_72929556_72929615_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944103_72945904_72946041_72946743
ES.35581.43	chr9	-	1205	9	NNC	ENSMUSG00000079469.11	novel	694	2	NA	NA	30	-2267	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_3	21.9416840739265	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGGAAAAAAAATTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	72946903	72927159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72927451_72928567_72928633_72929556_72929615_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.44	chr9	-	4412	4	NNC	ENSMUSG00000079469.11	novel	664	6	NA	NA	-4	284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATTATTTATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	72946937	72939967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72941994_72942951_72944177_72944377_72944960_72946358
ES.35581.45	chr9	-	318	1	Intergenic	novelGene_28976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	72944753	72944435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72944400_72944800
ES.35581.5	chr9	-	4191	10	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-8	352	intron_retention	FALSE	non_canonical	0	0	junction_5	19.5378707914074	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGTAACATGGTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	72946989	72920640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929615_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.6	chr9	-	4358	11	NIC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	-19	350	intron_retention	FALSE	non_canonical	0	0	junction_6	19.0580691571838	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTATAGTAACATGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	72946952	72920642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.8	chr9	-	4445	11	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	7	348	intron_retention	FALSE	non_canonical	0	0	junction_3	24.4092195696626	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTATTATAGTAACATGG	NA	False	NA	NA	False	AATAAA	-19	NA	72946974	72920644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928068_72928259_72928567_72928633_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35581.9	chr9	-	4242	11	NNC	ENSMUSG00000079469.11	novel	2193	12	NA	NA	30	348	intron_retention	FALSE	non_canonical	1	2	junction_5	18.0399556540475	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTATTATAGTAACATGG	NA	False	NA	NA	False	AATAAA	-19	NA	72946903	72920644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929615_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ES.35582.1	chr9	+	139	1	Intergenic	novelGene_28977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72950900	72951039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72950900_72951000
ES.35583.1	chr9	+	3223	7	FSM	ENSMUSG00000032202.12	ENSMUST00000184146.8	3168	7	-60	5	-60	-5	multi-exon	FALSE	canonical	0	0	junction_1	5.59761854124889	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTTCTGGTGAATATT	NA	False	NA	NA	False	ATTAAA	-43	NA	72952075	73004906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72952294_72968257_72968407_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ES.35583.2	chr9	+	3059	6	FSM	ENSMUSG00000032202.12	ENSMUST00000034722.5	2979	6	-45	-35	-42	-2	multi-exon	FALSE	canonical	2	4	junction_1	3.86781592116274	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGGTGAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	72952093	73004909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_72952294_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ES.35583.3	chr9	+	147	1	Intergenic	novelGene_28978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAATCTTTAAG	3624	False	NA	NA	False	NA	NA	NA	72965802	72965949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72965800_72965900
ES.35583.4	chr9	+	3522	6	NNC	ENSMUSG00000032202.12	novel	3168	7	NA	NA	18732	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08330601085553	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCAGTATATCAAGTTCT	757	False	NA	NA	False	ATTAAA	-33	NA	72970997	73004896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72971674_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ES.35583.5	chr9	+	3432	7	NNC	ENSMUSG00000032202.12	novel	3168	7	NA	NA	18743	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.59761854124889	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGGTGAATATTTCA	768	False	NA	NA	False	NA	NA	NA	72971008	73004909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72971475_72971566_72971674_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ES.35583.6	chr9	+	2155	6	NNC	ENSMUSG00000032202.12	novel	3168	7	NA	NA	18922	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.08330601085553	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAGGGAGGGAGTTC	947	False	NA	NA	False	ATTAAA	-17	NA	72971187	73003719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_72971674_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ES.35583.7	chr9	+	221	1	Intergenic	novelGene_28980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTCCCCTTAGTTG	7132	False	NA	NA	False	AAAACA	-14	NA	72977372	72977593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_72977400_72977600
ES.35584.1	chr9	-	175	1	Intergenic	novelGene_28979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGCAGAACAGGG	NA	False	NA	NA	False	NA	NA	NA	72970066	72969891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72969900_72970100
ES.35585.1	chr9	-	1591	1	Antisense	novelGene_ENSMUSG00000032202.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	72992345	72990754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_72990800_72992300
ES.35586.1	chr9	-	182	1	Intergenic	novelGene_28981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGTTGGTTGGTTGG	NA	False	NA	0	True	NA	NA	NA	73000021	72999839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_72999800_7.3e+07
ES.35587.1	chr9	-	285	1	Intergenic	novelGene_28982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	73006865	73006580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73006600_73006900
ES.35588.1	chr9	+	1664	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	21	-4	21	4	multi-exon	FALSE	canonical	3	216	junction_2	18.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTGTATTTGAATGG	NA	False	NA	30	True	AATAAA	-17	NA	73009700	73011724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73009958_73010111_73010292_73010497
ES.35588.2	chr9	+	1187	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	23	18	23	-18	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAATTGCATT	NA	False	NA	8	True	TTTAAA	-8	NA	73009702	73011702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
ES.35588.3	chr9	+	1831	2	ISM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	59	-3	-53	3	intron_retention	FALSE	canonical	3	253	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGTGTATTTGAATG	NA	False	NA	29	True	AATAAA	-16	NA	73009738	73011723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_73009958_73010111
ES.35589.1	chr9	-	179	1	Intergenic	novelGene_28983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGGAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	73019565	73019386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73019400_73019600
ES.3559.1	chr10	-	4862	1	Intergenic	novelGene_2721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGATTCTGGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	90165411	90160549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_90160500_90165400
ES.35590.1	chr9	-	260	1	Intergenic	novelGene_28984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCACCATGTGGGTCCA	NA	False	NA	NA	False	NA	NA	NA	73020331	73020071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73020100_73020300
ES.35590.2	chr9	-	159	1	Intergenic	novelGene_28985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAACAAAATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	73020332	73020173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73020200_73020300
ES.35591.1	chr9	+	1580	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	-36	-1	-14	1	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACATATCTCTTATTTA	8544	False	NA	14	True	AATAAA	-19	NA	73020693	73030616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.10	chr9	+	2920	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	36	-1413	-19	1413	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTGTGCTTTTGTTTG	8616	False	NA	NA	False	NA	NA	NA	73020765	73032028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.11	chr9	+	3611	2	ISM	ENSMUSG00000032215.16	ENSMUST00000165177.2	597	6	4152	-952	4152	1	3prime_fragment	FALSE	canonical	3	633	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACATATCTCTTATTTA	NA	False	NA	14	True	AATAAA	-19	NA	73026029	73030616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_73028570_73029545
ES.35591.2	chr9	+	3194	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	-27	-1624	-5	1624	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGATTTTTTTTTTGCCT	8553	False	NA	NA	False	CATAAA	-37	NA	73020702	73032239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.3	chr9	+	1531	6	NNC	ENSMUSG00000032215.16	novel	1543	6	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	377.547136130047	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTACATATCTCTTATT	8585	False	NA	12	True	AATAAA	-17	NA	73020734	73030614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029551
ES.35591.4	chr9	+	2683	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	10	-1150	10	1150	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCAAATGCTCTTTTGT	8590	False	NA	NA	False	AAGAAA	-37	NA	73020739	73031765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.5	chr9	+	1534	6	FSM	ENSMUSG00000032215.16	ENSMUST00000113505.4	734	6	-37	-763	18	-1	multi-exon	FALSE	canonical	1	1	junction_1	360.815188150388	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTACATATCTCTTATT	8598	False	NA	12	True	AATAAA	-17	NA	73020747	73030614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022159_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.6	chr9	+	4343	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	22	-2822	22	2822	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATTCATTCCTTTTTC	8602	False	NA	NA	False	NA	NA	NA	73020751	73033437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.7	chr9	+	800	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	23	720	23	44	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCCGAATGATGTACT	8603	False	NA	34	True	CATAAA	-27	NA	73020752	73029895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ES.35591.9	chr9	+	1463	7	NNC	ENSMUSG00000032215.16	novel	1543	6	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	347.474419522103	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTACATATCTCTTATT	8614	False	NA	12	True	AATAAA	-17	NA	73020763	73030614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545_73029911_73029955
ES.35592.1	chr9	+	160	1	Intergenic	novelGene_28986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	6128	False	NA	NA	False	NA	NA	NA	73051025	73051185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_73051000_73051200
ES.35593.1	chr9	+	176	1	Intergenic	novelGene_28987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAAATGGAATC	NA	False	NA	NA	False	NA	NA	NA	73060369	73060545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_73060400_73060500
ES.35594.1	chr9	+	1106	6	Antisense	novelGene_ENSMUSG00000062151.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTATTTGTTTGTTTTT	NA	False	NA	NA	False	AATACA	-18	NA	73474032	73519105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_73474267_73474530_73474587_73474843_73474961_73503271_73503360_73516277_73516410_73518626
ES.35595.1	chr9	-	148	1	Intergenic	novelGene_28988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	73725390	73725242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73725200_73725400
ES.35596.1	chr9	-	173	1	Intergenic	novelGene_28989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	73753192	73753019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_73753000_73753200
ES.35597.1	chr9	-	180	1	Intergenic	novelGene_28990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	74040928	74040748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_74040700_74040900
ES.35598.1	chr9	+	175	1	Intergenic	novelGene_28991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGACATAT	NA	False	NA	NA	False	NA	NA	NA	74069133	74069308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_74069100_74069300
ES.35599.1	chr9	+	177	1	Intergenic	novelGene_28992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAAAGATTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	74250713	74250890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_74250700_74250900
ES.356.1	chr1	+	1838	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-146	1470	-146	2	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCCCATGGATGAATT	NA	False	NA	29	True	AGTAAA	-17	NA	39574736	39584484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.10	chr1	+	3469	5	FSM	ENSMUSG00000003135.16	ENSMUST00000160145.2	2097	5	-2453	1081	-10	1	multi-exon	FALSE	canonical	3	736	junction_1	33.3541601603158	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTCCCATGGATGAAT	NA	False	NA	28	True	AGTAAA	-16	NA	39574872	39584483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.11	chr1	+	2754	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-9	-23	intron_retention	FALSE	canonical	3	674	junction_1	53.8241581448331	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTAAAATTTCCTTTTT	NA	False	NA	4	True	TATAAA	-15	NA	39574873	39584459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.12	chr1	+	1379	5	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	1	1	junction_1	347.533721385422	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTTTCCCATGGATGA	NA	False	NA	26	True	AGTAAA	-14	NA	39574874	39584481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39575419_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.13	chr1	+	1575	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-3	1590	-3	-118	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTATTGTTCAACTGT	NA	False	NA	-91	True	NA	NA	NA	39574879	39584364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.15	chr1	+	1652	7	NNC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-1	-24	intron_retention	FALSE	non_canonical	0	0	junction_4	284.633926688689	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTAAAATTTCCTTTT	NA	False	NA	3	True	TATAAA	-14	NA	39574881	39584458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579138_39581476_39581684_39583972_39584070_39584149
ES.356.16	chr1	+	1729	5	ISM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	7	3795	7	-2323	5prime_fragment	FALSE	canonical	3	674	junction_2	36.9687367920517	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGAATTCCCTGTTG	NA	False	NA	NA	False	NA	NA	NA	39574889	39582159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480
ES.356.18	chr1	+	3220	6	ISM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	24	-2	24	2	intron_retention	FALSE	canonical	3	674	junction_2	50.7503694567833	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAAAATATTAG	NA	False	NA	NA	False	NA	NA	NA	39574906	39585956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972
ES.356.19	chr1	+	2817	7	NNC	ENSMUSG00000003135.16	novel	3482	8	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	281.116227445755	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAGTTTATATTATTT	NA	False	NA	NA	False	NA	NA	NA	39574912	39585970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584074_39584484
ES.356.2	chr1	+	3283	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	-105	-16	-105	0	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAGTTTATATTATTT	NA	False	NA	NA	False	NA	NA	NA	39574777	39585970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.20	chr1	+	1322	1	NIC	ENSMUSG00000003135.16	novel	3482	8	NA	NA	30	-8248	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAGTTCTCAACAGC	NA	False	NA	NA	False	TTTAAA	-36	NA	39574912	39576234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39574900_39576200
ES.356.21	chr1	+	2174	1	NIC	ENSMUSG00000003135.16	novel	3482	8	NA	NA	-838	-4032	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCCATCTGTCTTAG	NA	False	NA	NA	False	AAAAAG	-28	NA	39578276	39580450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39578300_39580400
ES.356.3	chr1	+	3042	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-43	2	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAAAATATTAG	NA	False	NA	NA	False	NA	NA	NA	39574839	39585956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.5	chr1	+	1566	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-41	0	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	27	True	AGTAAA	-15	NA	39574841	39584482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.6	chr1	+	1585	6	NNC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-20	-22	intron_retention	FALSE	canonical	0	0	junction_1	315.81222268937	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAAATTTCCTTTTTC	NA	False	NA	5	True	TATAAA	-16	NA	39574862	39584460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39575419_39577289_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ES.356.7	chr1	+	1501	6	NNC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_4	296.779648897966	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	27	True	AGTAAA	-15	NA	39574872	39584482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579161_39583972_39584070_39584149
ES.356.9	chr1	+	3820	5	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	-10	-19	intron_retention	FALSE	canonical	3	713	junction_1	42.2692263946243	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATTTCCTTTTTCCTA	NA	False	NA	8	True	TATAAA	-19	NA	39574872	39584463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39575419_39576496_39579157_39581480_39581684_39583972_39584070_39584149
ES.3560.1	chr10	+	5454	1	Genic_Genomic	ENSMUSG00000058589.15	novel	NA	NA	NA	NA	76384	3715	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90807423	90812877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_90807400_90812900
ES.35600.1	chr9	+	1901	2	FSM	ENSMUSG00000043013.11	ENSMUST00000056006.11	3957	2	-58	2114	-58	-693	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCAGGACCTCAAGAT	NA	False	NA	NA	False	ATTAAA	-20	NA	74769144	74796949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74770684_74796587
ES.35600.2	chr9	+	5607	2	FSM	ENSMUSG00000043013.11	ENSMUST00000056006.11	3957	2	-55	-1595	-55	1595	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAAGATCTACTATTTA	NA	False	NA	NA	False	NA	NA	NA	74769147	74800658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74770684_74796587
ES.35600.3	chr9	+	157	1	Intergenic	novelGene_28993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	74783962	74784119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_74784000_74784100
ES.35601.1	chr9	-	157	1	Intergenic	novelGene_28994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	74791039	74790882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_74790900_74791000
ES.35602.2	chr9	+	4128	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	-156	383	13	0	multi-exon	FALSE	canonical	2	6	junction_4	2.59673940848048	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGTGTTTTAA	NA	False	NA	NA	False	AATATA	-16	NA	74860178	74939367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ES.35602.3	chr9	+	3876	13	FSM	ENSMUSG00000034858.17	ENSMUST00000215370.2	4205	13	-34	363	-34	0	multi-exon	FALSE	canonical	1	2	junction_1	3.15788255358274	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTGGTGTGTTTTAA	NA	False	NA	NA	False	AATATA	-16	NA	74860211	74939367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74860342_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ES.35602.4	chr9	+	4414	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	-63	4	26	-4	multi-exon	FALSE	canonical	2	6	junction_4	2.59673940848048	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTGGCTTTTATTC	NA	False	NA	NA	False	AATATA	-16	NA	74860271	74939746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ES.35602.5	chr9	+	4143	13	FSM	ENSMUSG00000034858.17	ENSMUST00000215370.2	4205	13	66	-4	4	4	multi-exon	FALSE	canonical	1	2	junction_1	3.15788255358274	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTAAAATGTGTATT	NA	False	NA	NA	False	AATATA	-4	NA	74860311	74939734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74860342_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ES.35602.6	chr9	+	5672	2	NIC	ENSMUSG00000034858.17	novel	3795	12	NA	NA	45003	4	intron_retention	FALSE	canonical	3	14	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTAAAATGTGTATT	NA	False	NA	NA	False	AATATA	-4	NA	74928395	74939734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74933130_74938796
ES.35603.1	chr9	-	173	1	Intergenic	novelGene_28995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGAAATCTGTTCC	NA	False	NA	NA	False	NA	NA	NA	74942920	74942747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_74942700_74942900
ES.35604.1	chr9	+	3970	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	-7	0	-7	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944888	74967595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35604.10	chr9	+	1676	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	56	2212	-7	6	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTATGCTGAGAATCA	NA	False	NA	10	True	AATAAA	-19	NA	74944951	74965364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35604.11	chr9	+	2881	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	57	1006	-6	-1006	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTTTTGTTCAGTAG	NA	False	NA	NA	False	AGTAAA	-43	NA	74944952	74966570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35604.12	chr9	+	348	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	2461.20390595064	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	False	NA	26	True	ATTAAA	-13	NA	74944955	74964104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945002_74945188_74945244_74959514_74959574_74963916
ES.35604.13	chr9	+	4682	3	ISM	ENSMUSG00000007656.14	ENSMUST00000164467.8	1047	5	5	887	5	1	intron_retention	FALSE	canonical	3	3551	junction_1	1227.5	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74944965	74964105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_74945002_74945188_74945244_74959514
ES.35604.15	chr9	+	4766	4	NNC	ENSMUSG00000007656.14	novel	540	4	NA	NA	10	0	intron_retention	FALSE	canonical	3	14	junction_2	1665.24052316775	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	False	NA	26	True	ATTAAA	-13	NA	74944970	74964104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945002_74945188_74945244_74950490_74950581_74959514
ES.35604.16	chr9	+	487	5	NNC	ENSMUSG00000007656.14	novel	540	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	2465.43713162595	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	False	NA	26	True	ATTAAA	-13	NA	74944970	74964104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945002_74945188_74945244_74950490_74950581_74959514_74959638_74963916
ES.35604.17	chr9	+	1125	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	75	2744	10	-160	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGTCTGTATTAAT	NA	False	NA	11	True	AATACA	-19	NA	74944970	74964832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35604.19	chr9	+	4112	6	NNC	ENSMUSG00000007656.14	novel	1047	5	NA	NA	11	-1	intron_retention	FALSE	canonical	2	3	junction_3	2395.3532015133	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTTTATTGATTTTAA	NA	False	NA	0	True	AATAAA	-10	NA	74944971	74967575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945002_74945188_74945244_74950220_74950376_74950490_74950581_74959514_74959638_74963916
ES.35604.20	chr9	+	1443	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	13	-1027	11	155	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTCTTAGTGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	74944971	74965147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ES.35604.21	chr9	+	3274	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2465.51013427693	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTATTGATTTTAAT	NA	False	NA	1	True	AATAAA	-11	NA	74944971	74967576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945002_74945188_74945244_74959514_74959574_74964446
ES.35604.22	chr9	+	872	5	FSM	ENSMUSG00000007656.14	ENSMUST00000164467.8	1047	5	15	160	15	-160	multi-exon	FALSE	canonical	2	10	junction_4	2415.60255164214	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGTCTGTATTAAT	NA	False	NA	11	True	AATACA	-19	NA	74944975	74964832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916_74964199_74964446
ES.35604.23	chr9	+	388	4	NNC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2787.10315560799	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	False	NA	26	True	ATTAAA	-13	NA	74944975	74964104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74944998_74945188_74945244_74959514_74959638_74963916
ES.35604.24	chr9	+	1403	5	FSM	ENSMUSG00000007656.14	ENSMUST00000164467.8	1047	5	23	-379	-16	13	multi-exon	FALSE	canonical	2	10	junction_4	2415.60255164214	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGAGAATCAAACCTCT	NA	False	NA	17	True	AATAAA	-26	NA	74944983	74965371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916_74964199_74964446
ES.35604.25	chr9	+	555	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	0	3491	0	0	multi-exon	FALSE	canonical	3	5814	junction_2	96	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTCTACTGTCCTT	NA	False	NA	26	True	ATTAAA	-13	NA	74944999	74964104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945244_74959514_74959638_74963916
ES.35604.26	chr9	+	4833	2	ISM	ENSMUSG00000007656.14	ENSMUST00000164467.8	1047	5	41	887	2	1	intron_retention	FALSE	canonical	3	6006	junction_1	0	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCTACTGTCCTTT	NA	False	NA	27	True	ATTAAA	-14	NA	74945001	74964105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_74945244_74959514
ES.35604.27	chr9	+	4040	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	6	0	6	0	multi-exon	FALSE	canonical	3	5814	junction_2	96	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74945005	74967595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945244_74959514_74959638_74963916
ES.35604.28	chr9	+	1269	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	15	2762	15	-159	multi-exon	FALSE	canonical	3	5814	junction_2	96	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATGTCTGTATTAATT	NA	False	NA	12	True	AATACA	-20	NA	74945014	74964833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945244_74959514_74959638_74963916
ES.35604.29	chr9	+	2051	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	32	1963	1	274	multi-exon	FALSE	canonical	3	5814	junction_2	96	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTTTATGTATTAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	74945031	74965632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945244_74959514_74959638_74963916
ES.35604.30	chr9	+	1788	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	34	2224	3	13	multi-exon	FALSE	canonical	3	5814	junction_2	96	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGAGAATCAAACCTCT	NA	False	NA	17	True	AATAAA	-26	NA	74945033	74965371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945244_74959514_74959638_74963916
ES.35604.31	chr9	+	3931	4	NNC	ENSMUSG00000007656.14	novel	540	4	NA	NA	-12	1	intron_retention	FALSE	canonical	3	14	junction_1	2732.02737093821	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTATTGATTTTAATA	NA	False	NA	2	True	AATAAA	-12	NA	74945186	74967577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74945244_74950490_74950581_74959514_74959638_74963916
ES.35604.32	chr9	+	3829	1	NIC	ENSMUSG00000007656.14	novel	3963	4	NA	NA	4416	1	mono-exon	FALSE	NA	NA	NA	NA	NA	639	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTATTGATTTTAATA	NA	False	NA	2	True	AATAAA	-12	NA	74963748	74967577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74963700_74967600
ES.35604.33	chr9	+	4793	2	NNC	ENSMUSG00000007656.14	novel	4046	3	NA	NA	7392	4610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTCTTGAGAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	74966724	74972205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74968638_74969325
ES.35604.4	chr9	+	445	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	35	3464	-28	8	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTCCTTTATTTCTC	NA	False	NA	34	True	ATTAAA	-21	NA	74944930	74964112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35604.5	chr9	+	642	2	ISM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	-28	18365	-28	0	5prime_fragment	FALSE	canonical	3	608	junction_1	0	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74944930	74945755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_74945006_74945188
ES.35604.6	chr9	+	845	1	NIC	ENSMUSG00000007656.14	novel	3944	4	NA	NA	-26	22	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCTGATGGGCTTTGCA	NA	False	NA	NA	False	NA	NA	NA	74944932	74945777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74944900_74945800
ES.35604.7	chr9	+	3226	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	-8	-2789	-8	-667	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCAACCCAAACTCTGTA	NA	False	NA	NA	False	NA	NA	NA	74944950	74966909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ES.35604.8	chr9	+	1312	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	55	2577	-8	7	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTAAGCTTTTTCATTT	NA	False	NA	NA	False	AATATA	-14	NA	74944950	74964999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ES.35605.1	chr9	-	231	1	Intergenic	novelGene_28996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTCAAATCTGATTT	NA	False	NA	NA	False	AAAAAG	-28	NA	74951935	74951704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_74951700_74951900
ES.35606.1	chr9	+	7521	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-26	531	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGCCTGAATGTCCTT	2307	False	NA	22	True	ATTAAA	-24	NA	74978443	75126766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.10	chr9	+	6422	39	NIC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	15.1526169539792	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCCAAGTAACTTCCT	2325	False	NA	9	True	AATAAA	-17	NA	74978461	75125766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.11	chr9	+	10959	39	NNC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-7	-664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.684545330088	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATGTGAGACATTTT	2326	False	NA	NA	False	AATAAA	-14	NA	74978462	75130306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047933_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081231_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.12	chr9	+	7578	41	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-7	532	combination_of_known_junctions	FALSE	canonical	3	14	junction_31	15.7384084328753	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTGAATGTCCTTG	2326	False	NA	23	True	ATTAAA	-25	NA	74978462	75126767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.13	chr9	+	8954	39	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-2	514	intron_retention	FALSE	canonical	3	40	junction_18	11.6756725562123	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTCATTATCTTATT	2331	False	NA	5	True	ATTAAA	-7	NA	74978467	75126749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.15	chr9	+	6475	40	NNC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.6666456838166	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAAGTAACTTCCTTC	2349	False	NA	11	True	AATAAA	-19	NA	74978485	75125768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030332_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.16	chr9	+	11677	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	2355	False	NA	NA	False	AATAAA	-19	NA	74978491	75130970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.19	chr9	+	6074	40	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	18.337546584185	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCCAAGTAACTTCCT	2748	False	NA	9	True	AATAAA	-17	NA	74978884	75125766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.2	chr9	+	3701	5	FSM	ENSMUSG00000034593.17	ENSMUST00000136871.2	1919	5	-44	-1738	-26	1738	multi-exon	FALSE	canonical	3	52	junction_1	5.33853912601566	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACCTGTTGAACAGTT	2307	False	NA	NA	False	NA	NA	NA	74978443	75040028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253
ES.35606.20	chr9	+	11148	38	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-24515	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_28	15.2080771281007	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	NA	False	NA	NA	False	AATAAA	-19	NA	75023465	75130970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.21	chr9	+	5929	38	NNC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-20028	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	18.8574290309332	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTCCTTCTCTGTGTCC	NA	False	NA	20	True	AATAAA	-28	NA	75027952	75125777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061166_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081231_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.22	chr9	+	3868	1	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-11873	1685	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAACCAACC	NA	False	NA	NA	False	NA	NA	NA	75036107	75039975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75036100_75040000
ES.35606.23	chr9	+	6592	36	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-10729	526	combination_of_known_junctions	FALSE	canonical	3	40	junction_14	11.7752421007218	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTATTGAAGCCTGAATG	NA	False	NA	17	True	ATTAAA	-19	NA	75037251	75126761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.24	chr9	+	7261	36	NNC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-6025	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	18.9148467763138	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGCCAAGTAACTTC	4110	False	NA	7	True	AATAAA	-15	NA	75041955	75125764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75073914_75074071_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.25	chr9	+	5287	34	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	734	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_24	16.9556760258903	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGCCAAGTAACTTC	NA	False	NA	7	True	AATAAA	-15	NA	75048714	75125764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.26	chr9	+	8272	26	NNC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	19831	-2	intron_retention	FALSE	canonical	0	0	junction_5	25.2869610669214	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGCCAAGTAACTTC	NA	False	NA	7	True	AATAAA	-15	NA	75067811	75125764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75073914_75074071_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.27	chr9	+	4865	22	NIC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-19889	525	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	18.7899234828084	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTATTGAAGCCTGAAT	28	False	NA	16	True	ATTAAA	-18	NA	75071576	75126760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.28	chr9	+	9226	24	NNC	ENSMUSG00000034593.17	novel	2640	14	NA	NA	-17500	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.9510039482072	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	2384	False	NA	NA	False	AATAAA	-19	NA	75073965	75130970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75074071_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.29	chr9	+	3474	20	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-12647	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	12.4709079744167	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCCAAGTAACTTCC	7237	False	NA	8	True	AATAAA	-16	NA	75078818	75125765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.3	chr9	+	6608	41	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	-26	12	combination_of_known_junctions	FALSE	canonical	3	14	junction_31	15.7384084328753	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCTTCTCTGTGTCCC	2307	False	NA	21	True	AATAAA	-29	NA	74978443	75125778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.30	chr9	+	7554	12	FSM	ENSMUSG00000034593.17	ENSMUST00000148144.8	1758	12	-101	-5695	-2	0	multi-exon	FALSE	canonical	2	6	junction_2	23.3793721327651	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	NA	False	NA	NA	False	AATAAA	-19	NA	75093174	75130970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.31	chr9	+	6201	10	NIC	ENSMUSG00000034593.17	novel	1758	12	NA	NA	-170	12	intron_retention	FALSE	canonical	3	40	junction_1	14.7756890754483	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCTTCTCTGTGTCCC	NA	False	NA	21	True	AATAAA	-29	NA	75097050	75125778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.32	chr9	+	3272	5	ISM	ENSMUSG00000034593.17	ENSMUST00000148144.8	1758	12	23661	-1066	15882	106	3prime_fragment	FALSE	canonical	3	66	junction_1	11.247221879202	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCTTAGGTGTTGCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	75116936	75126341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.33	chr9	+	5944	3	NNC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	21378	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGTCTTTGTCTATAAAC	NA	False	NA	NA	False	AATAAA	-19	NA	75122432	75130970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75122530_75124780_75124880_75125222
ES.35606.4	chr9	+	6414	40	NNC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-26	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.5953937129673	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCTTCTCTGTGTCCC	2307	False	NA	21	True	AATAAA	-29	NA	74978443	75125778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74978942_75023467_75023579_75027954_75028043_75030227_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.5	chr9	+	6531	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-22	14	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTCTCTGTGTCCCTA	2311	False	NA	23	True	AATAAA	-31	NA	74978447	75125780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.6	chr9	+	7438	39	NNC	ENSMUSG00000034593.17	novel	6480	40	NA	NA	-21	530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.3553904919183	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGCCTGAATGTCCT	2312	False	NA	21	True	ATTAAA	-23	NA	74978448	75126765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030342_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ES.35606.9	chr9	+	5899	38	NNC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	-10	-3129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	14.4233699657444	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTCTTACATAATTAC	2323	False	NA	NA	False	AATAAA	-19	NA	74978459	75122146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75121852
ES.35607.1	chr9	-	1365	1	Intergenic	novelGene_28997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGCAGCAGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	74989763	74988398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_74988400_74989800
ES.35608.1	chr9	-	3351	1	Antisense	novelGene_ENSMUSG00000034593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGAACCTTTGGGGTC	9679	False	NA	NA	False	AGTAAA	-12	NA	75062820	75059469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75059500_75062800
ES.35609.1	chr9	-	161	1	Intergenic	novelGene_28998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	9124	False	NA	NA	False	NA	NA	NA	75090050	75089889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75089900_75090000
ES.3561.1	chr10	+	176	1	Intergenic	novelGene_2722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAATGAAATAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	90814849	90815025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_90814800_90815000
ES.35610.1	chr9	+	5177	36	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-12	8282	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_31	12.4256482605085	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAACACTAAGTTTT	5116	False	NA	NA	False	AATAAA	-13	NA	75139289	75203162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443
ES.35610.10	chr9	+	5561	42	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	14.6940238431936	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	5151	False	NA	5	True	AATAAA	-15	NA	75139324	75212730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203355_75203443_75204685_75204956_75208087_75208263_75208685_75208767_75211211_75211382_75212465
ES.35610.11	chr9	+	3596	4	ISM	ENSMUSG00000033590.9	ENSMUST00000216788.2	4782	30	-33	38275	-9	-9043	5prime_fragment	FALSE	canonical	3	45	junction_2	8.9566858950296	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGATAAGAT	5151	False	NA	NA	False	NA	NA	NA	75139324	75156605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419
ES.35610.12	chr9	+	6597	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	13.9523967475126	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	5164	False	NA	5	True	AATAAA	-15	NA	75139337	75212730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165466_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196160_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203355_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.13	chr9	+	5006	35	NIC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	7	8282	combination_of_known_splicesites	FALSE	canonical	1	2	junction_33	12.6747985795097	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAACACTAAGTTTT	5167	False	NA	NA	False	AATAAA	-13	NA	75139340	75203162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75201207_75201363_75202443
ES.35610.14	chr9	+	4799	34	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	39	12631	7	5222	5prime_fragment	FALSE	canonical	3	15	junction_20	11.609897300802	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTAAATTCTTGTT	5167	False	NA	NA	False	AATAAA	-18	NA	75139340	75200102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435
ES.35610.15	chr9	+	6778	42	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	13.3004899875301	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5167	False	NA	8	True	AATAAA	-18	NA	75139340	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75181652_75181743_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.16	chr9	+	6759	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	14.7935585644564	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	5167	False	NA	5	True	AATAAA	-15	NA	75139340	75212730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75186960_75187115_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195430_75196160_75196239_75196340_75196510_75198130_75198219_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.17	chr9	+	5603	42	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	12.1127952858587	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5168	False	NA	8	True	AATAAA	-18	NA	75139341	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75211382_75212465
ES.35610.18	chr9	+	6949	42	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	13.2572138107894	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5172	False	NA	8	True	AATAAA	-18	NA	75139345	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75194566_75194833_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.19	chr9	+	1305	8	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	12949	47098	-10894	-13	internal_fragment	FALSE	canonical	3	35	junction_2	6.73401357108153	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTAAATATAGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	75152250	75165635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
ES.35610.2	chr9	+	7936	39	NIC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	14.246931924175	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5127	False	NA	8	True	AATAAA	-18	NA	75139300	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75139458_75150043_75150155_75152251_75152418_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165467_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203355_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.20	chr9	+	5906	34	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	2144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.4416752307713	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	NA	False	NA	8	True	AATAAA	-18	NA	75165288	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75165467_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75194566_75194833_75195330_75195425_75196174_75196239_75196340_75196510_75197846_75198024_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.21	chr9	+	4225	32	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	6345	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	10.6762010804839	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	2258	False	NA	5	True	AATAAA	-15	NA	75169489	75212730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75211409_75212465
ES.35610.22	chr9	+	3348	22	NNC	ENSMUSG00000033590.9	novel	3189	12	NA	NA	10584	5223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1039205758234	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTAAATTCTTGTTA	6497	False	NA	NA	False	AATAAA	-19	NA	75173728	75200103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75174029_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435
ES.35610.23	chr9	+	2502	15	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	43273	12626	-12538	5227	internal_fragment	FALSE	canonical	3	15	junction_1	9.13867091662945	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAATTCTTGTTAACAA	4892	False	NA	NA	False	AATAAA	-23	NA	75182574	75200107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435
ES.35610.24	chr9	+	4284	22	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	43375	0	-12436	0	3prime_fragment	FALSE	canonical	3	15	junction_1	8.65907569182385	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	4994	False	NA	8	True	AATAAA	-18	NA	75182676	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.25	chr9	+	6538	16	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-6915	0	intron_retention	FALSE	canonical	1	1	junction_15	11.9301671777427	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	2132	False	NA	8	True	AATAAA	-18	NA	75188197	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75211382_75212465
ES.35610.26	chr9	+	3436	17	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-5902	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	13.8099545165797	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	3145	False	NA	8	True	AATAAA	-18	NA	75189210	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203355_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.27	chr9	+	3525	17	NNC	ENSMUSG00000033590.9	novel	3189	12	NA	NA	-4268	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.7512717271028	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	603	False	NA	8	True	AATAAA	-18	NA	75190844	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75190979_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.28	chr9	+	3867	7	NIC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	-4096	5222	intron_retention	FALSE	canonical	3	28	junction_2	7.44796765716811	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTAAATTCTTGTT	775	False	NA	NA	False	AATAAA	-18	NA	75191016	75200102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75191269_75191428_75191493_75192214_75192296_75193692_75196239_75196340_75196510_75198130_75198219_75199435
ES.35610.3	chr9	+	6728	41	FSM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	-1	0	-1	0	multi-exon	FALSE	canonical	3	15	junction_20	11.0181384543851	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5127	False	NA	8	True	AATAAA	-18	NA	75139300	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.30	chr9	+	3452	12	FSM	ENSMUSG00000033590.9	ENSMUST00000215620.2	3189	12	-263	0	-263	0	multi-exon	FALSE	canonical	3	30	junction_2	7.22140985754018	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	1454	False	NA	8	True	AATAAA	-18	NA	75194849	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.31	chr9	+	5897	11	NNC	ENSMUSG00000033590.9	novel	3189	12	NA	NA	-121	0	intron_retention	FALSE	canonical	0	0	junction_1	13.7898513407506	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	1596	False	NA	8	True	AATAAA	-18	NA	75194991	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75195028_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.32	chr9	+	3488	23	Fusion	ENSMUSG00000032192.10_ENSMUSG00000033590.9	novel	3189	12	NA	NA	24	-4	multi-exon	FALSE	canonical	0	0	junction_12	16.0920004765984	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTGTTCAGTTGTCTT	1741	False	NA	NA	False	TTTAAA	-28	NA	75195136	75252755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75211382_75218660_75218803_75221553_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241643_75242932_75243077_75244552_75244645_75247469_75247519_75251762_75251930_75252234
ES.35610.33	chr9	+	3183	12	NNC	ENSMUSG00000033590.9	novel	3189	12	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	12.0075733677466	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	1744	False	NA	8	True	AATAAA	-18	NA	75195139	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.34	chr9	+	6015	10	NIC	ENSMUSG00000033590.9	novel	3189	12	NA	NA	61	-3	intron_retention	FALSE	canonical	3	30	junction_2	7.03606231066114	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGATGCACCATTTTT	1778	False	NA	5	True	AATAAA	-15	NA	75195173	75212730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.36	chr9	+	3274	11	Fusion	ENSMUSG00000032192.10_ENSMUSG00000033590.9	novel	3189	12	NA	NA	1340	1108	multi-exon	FALSE	canonical	0	0	junction_10	13.6238761004349	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAGATTAGTGTTG	3057	False	NA	NA	False	TATAAA	-9	NA	75196452	75213841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75212794_75213328
ES.35610.37	chr9	+	1715	11	NNC	ENSMUSG00000032192.10	novel	2105	11	NA	NA	-2	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	7.31846978541279	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTTGTCTTTTTTAAG	378	False	NA	NA	False	TTTAAA	-35	NA	75221420	75252762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244649_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ES.35610.38	chr9	+	2098	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	12	-5	7	0	multi-exon	FALSE	canonical	3	15	junction_6	3.38230690505755	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTATCTTGTCTTTAT	387	False	NA	6	True	NA	NA	NA	75221429	75253158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ES.35610.39	chr9	+	1560	10	NIC	ENSMUSG00000032192.10	novel	2105	11	NA	NA	13	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.6332495807108	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTTTTTTAAGA	393	False	NA	NA	False	TTTAAA	-36	NA	75221435	75252763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75221666_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ES.35610.4	chr9	+	5027	9	NIC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	0	-7	intron_retention	FALSE	canonical	3	37	junction_8	8.72854512504805	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGCTCCTGGGTCAT	5128	False	NA	NA	False	NA	NA	NA	75139301	75165641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
ES.35610.5	chr9	+	6746	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_31	11.9167686475823	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5130	False	NA	8	True	AATAAA	-18	NA	75139303	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196319_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.7	chr9	+	6677	41	NIC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	12.006144260336	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5138	False	NA	8	True	AATAAA	-18	NA	75139311	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165467_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ES.35610.8	chr9	+	1635	10	ISM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	14	47020	14	65	5prime_fragment	FALSE	canonical	3	35	junction_4	9.15302014516399	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCTTAGCCAGCAAAA	5142	False	NA	NA	False	AATAAA	-20	NA	75139315	75165713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240
ES.35610.9	chr9	+	7046	41	NNC	ENSMUSG00000033590.9	novel	6727	41	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_10	13.080137613955	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5142	False	NA	8	True	AATAAA	-18	NA	75139315	75212733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165467_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211_75211382_75212465
ES.35611.1	chr9	-	1888	1	Antisense	novelGene_ENSMUSG00000033590.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGTCAAAAGATTCTAA	NA	False	NA	NA	False	AATAAA	-21	NA	75182624	75180736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75180700_75182600
ES.35612.1	chr9	-	170	1	Intergenic	novelGene_28999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTTTATACA	NA	False	NA	NA	False	NA	NA	NA	75263688	75263518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75263500_75263700
ES.35613.1	chr9	+	804	1	Intergenic	novelGene_29000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAAGTGTATTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	75280601	75281405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75280600_75281400
ES.35614.1	chr9	+	171	1	Intergenic	novelGene_29001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGTTGCCAGACAGT	NA	False	NA	NA	False	NA	NA	NA	75284678	75284849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75284700_75284800
ES.35615.1	chr9	+	1739	1	Intergenic	novelGene_29003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	2068	False	NA	NA	False	AAAAAG	-41	NA	75313449	75315188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75313400_75315200
ES.35616.1	chr9	-	4255	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-36	-147	-36	145	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCGGGTATGTCCA	NA	False	NA	3	True	AATAAA	-45	NA	75317323	75294038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ES.35616.10	chr9	-	4138	6	NNC	ENSMUSG00000042688.17	novel	4089	6	NA	NA	181	109	intron_retention	FALSE	canonical	0	0	junction_5	120.421592748145	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCACGGCTCCTGTTTG	NA	False	NA	-33	True	AATAAA	-9	NA	75316460	75294074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316362
ES.35616.11	chr9	-	4178	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	-85	-21	-85	19	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTTTGTTTTGTCTGTT	NA	False	NA	-27	True	AATAAA	-37	NA	75317372	75294164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ES.35616.12	chr9	-	4469	6	FSM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	-375	-5	-151	5	multi-exon	FALSE	canonical	2	3	junction_5	119.229862031288	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAGTCTTTTAGAGT	NA	False	NA	-41	True	AATAAA	-23	NA	75317016	75294178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316483
ES.35616.14	chr9	-	4133	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	102.565881266628	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75317340	75294185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
ES.35616.16	chr9	-	6056	5	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	266	junction_4	21.5334042826489	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317292	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75296430_75297448_75297651_75300646_75302937_75304860_75306034_75317144
ES.35616.17	chr9	-	3848	7	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.382164420808	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317307	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75295715_75295957_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ES.35616.19	chr9	-	4146	7	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	141.531700414509	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317306	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75306147_75306204_75317144
ES.35616.2	chr9	-	4479	6	FSM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	-270	-120	-46	120	multi-exon	FALSE	canonical	2	3	junction_5	119.229862031288	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTGACTCTTTAGAA	NA	False	NA	-22	True	AATAAA	-20	NA	75316911	75294063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316483
ES.35616.20	chr9	-	3913	5	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	126.3672722662	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317294	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75296430_75297448_75297651_75302791_75302937_75304860_75306034_75317144
ES.35616.21	chr9	-	3882	7	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.382164420808	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317295	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75295680_75295876_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ES.35616.22	chr9	-	4077	6	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	148.394069962381	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACTGCTCAGTCT	NA	False	NA	-49	True	AATAAA	-15	NA	75317296	75294186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300807_75302787_75302937_75304860_75306024_75317136
ES.35616.25	chr9	-	1486	3	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	15839	1118	4087	-1116	3prime_fragment	FALSE	canonical	3	287	junction_2	19.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCGTTGTGTCTTTTTT	NA	False	NA	NA	False	ACTAAA	-32	NA	75300802	75295301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_75296430_75297448_75297651_75300646
ES.35616.26	chr9	-	6305	3	FSM	ENSMUSG00000042688.17	ENSMUST00000172946.2	3228	3	-14	-3063	-5	2418	multi-exon	FALSE	canonical	3	266	junction_2	13	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCCCGTCTACCATGG	NA	False	NA	NA	False	NA	NA	NA	75317292	75297952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75302937_75304860_75306034_75317144
ES.35616.27	chr9	-	3632	1	Intergenic	novelGene_29002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCTAGGGGCTTAC	NA	False	NA	NA	False	NA	NA	NA	75311241	75307609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75307600_75311200
ES.35616.28	chr9	-	1679	1	Genic_Genomic	ENSMUSG00000042688.17	novel	NA	NA	NA	NA	-1	-9916	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75317288	75315609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_75315600_75317300
ES.35616.3	chr9	-	4225	6	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-24	119	intron_retention	FALSE	canonical	3	45	junction_5	102.565881266628	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTTGACTCTTTAGA	NA	False	NA	-23	True	AATAAA	-19	NA	75317311	75294064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317136
ES.35616.4	chr9	-	6183	5	NIC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-14	115	intron_retention	FALSE	canonical	3	266	junction_4	21.5334042826489	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTCCTGTTTGACTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	75317301	75294068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75296430_75297448_75297651_75300646_75302937_75304860_75306034_75317144
ES.35616.5	chr9	-	4183	6	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-9	115	intron_retention	FALSE	non_canonical	0	0	junction_4	118.576557548278	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTCCTGTTTGACTCTT	NA	False	NA	-27	True	AATAAA	-15	NA	75317296	75294068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302939_75304877_75306034_75317144
ES.35616.6	chr9	-	4192	6	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	2	114	intron_retention	FALSE	non_canonical	0	0	junction_4	138.007825865057	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTCCTGTTTGACTCT	NA	False	NA	-28	True	AATAAA	-14	NA	75317285	75294069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302931_75304856_75306034_75317136
ES.35616.7	chr9	-	4284	7	NNC	ENSMUSG00000042688.17	novel	4072	6	NA	NA	-4	112	intron_retention	FALSE	canonical	0	0	junction_5	141.531700414509	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACGGCTCCTGTTTGACT	NA	False	NA	-30	True	AATAAA	-12	NA	75317282	75294071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75310447_75310543_75317136
ES.35617.1	chr9	+	3953	3	NNC	ENSMUSG00000097021.8	novel	1153	4	NA	NA	-55	775	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCATCTGAACTGGTGG	3160	False	NA	NA	False	NA	NA	NA	75317410	75323594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75317806_75318989_75319147_75320193
ES.35618.1	chr9	-	200	1	Intergenic	novelGene_29004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTAGTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	75339283	75339083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75339100_75339300
ES.35619.1	chr9	+	157	1	Intergenic	novelGene_29005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	1083	False	NA	NA	False	NA	NA	NA	75346192	75346349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75346200_75346300
ES.3562.1	chr10	+	170	1	Intergenic	novelGene_2723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	6410	False	NA	NA	False	NA	NA	NA	90914113	90914283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_90914100_90914300
ES.35620.1	chr9	-	205	1	Intergenic	novelGene_29006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGTGAGATCGCTTGT	NA	False	NA	NA	False	NA	NA	NA	75348270	75348065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75348100_75348300
ES.35621.1	chr9	+	2240	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	-54	-6	-42	6	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTAAGAAAACTGCTTT	872	False	NA	11	True	AATAAA	-20	NA	75348763	75373720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.10	chr9	+	3936	9	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	-3497	0	intron_retention	FALSE	canonical	3	353	junction_1	49.5667164032479	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	4973	False	NA	5	True	AATAAA	-14	NA	75352864	75373714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.2	chr9	+	3469	11	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	353	junction_2	50.3250434674427	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCCTATGCTTAAGAAA	917	False	NA	3	True	AATAAA	-12	NA	75348808	75373712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.3	chr9	+	3696	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	-8	-1508	4	1508	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTTGTGTATATGT	918	False	NA	NA	False	CATAAA	-21	NA	75348809	75375222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.4	chr9	+	3059	12	NNC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	133.858813001542	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTCCCTATGCTTAAGA	929	False	NA	1	True	AATAAA	-10	NA	75348820	75373710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75348918_75352516_75354081_75354302_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.5	chr9	+	3131	12	NNC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	134.560809934572	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTCCCTATGCTTAAGA	936	False	NA	1	True	AATAAA	-10	NA	75348827	75373710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363691_75364007_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.7	chr9	+	1987	11	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	25	-63	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	137.812517573695	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATTGAGATTAATTG	951	False	NA	-58	True	TATAAA	-20	NA	75348842	75373651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75348918_75352516_75353276_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ES.35621.8	chr9	+	3112	11	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	26	-2	intron_retention	FALSE	canonical	3	353	junction_2	50.3250434674427	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCCTATGCTTAAGAAA	952	False	NA	3	True	AATAAA	-12	NA	75348843	75373712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ES.35622.1	chr9	+	2325	3	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-84	-8606	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	4.5	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTGTAGTTTATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	75375813	75380292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75379554_75380085
ES.35622.10	chr9	+	2835	7	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-54	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.7527775720469	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATGTGTGTGCATTCT	NA	False	NA	18	True	AATAAA	-23	NA	75375843	75393965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75375966_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.11	chr9	+	3304	7	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-53	-2	intron_retention	FALSE	canonical	0	0	junction_3	16.0312195418814	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375844	75393961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380085_75380689_75385260_75385396_75388729_75388947_75390380_75390484_75391931
ES.35622.12	chr9	+	2691	6	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.7683226755416	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTATGTGTGTGC	NA	False	NA	13	True	AATAAA	-18	NA	75375851	75393960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75386953_75387087_75388729_75388947_75390380_75390484_75391931
ES.35622.13	chr9	+	3534	13	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-46	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.51074896107	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375851	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75377934_75378200_75379333_75379365_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.14	chr9	+	3176	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.7807014651697	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375856	75393963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.15	chr9	+	5043	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.7807014651697	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375856	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.17	chr9	+	3352	12	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-40	23817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	13.1180274671194	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGTATTTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	75375857	75417780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391841_75393958_75417748
ES.35622.18	chr9	+	3166	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.4488403016753	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375861	75393963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377558_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.19	chr9	+	3248	11	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.65571681816928	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375862	75393961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390365_75390484_75391931
ES.35622.2	chr9	+	3087	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.6666666666667	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375816	75393963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388818_75390380_75390480_75391931
ES.35622.20	chr9	+	3506	9	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-35	-6	intron_retention	FALSE	canonical	0	0	junction_4	14.9535739875121	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAGGGCTTTATGTGTG	NA	False	NA	10	True	AATAAA	-15	NA	75375862	75393957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380085_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.21	chr9	+	2443	4	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-31	-4	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	3.2659863237109	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375866	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75375966_75388729_75388947_75390380_75390480_75391931
ES.35622.22	chr9	+	2300	3	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-30	-8606	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	7.5	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTGTAGTTTATCTG	NA	False	NA	NA	False	AATAAA	-14	NA	75375867	75380292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377558_75379554_75380085
ES.35622.23	chr9	+	3464	9	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_4	13.1808336231059	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375878	75393961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380689_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390484_75391931
ES.35622.25	chr9	+	2967	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-16	23817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.9450819552204	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGTATTTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	75375881	75417780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380603_75380689_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931_75393958_75417748
ES.35622.26	chr9	+	3102	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.3465554947582	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375883	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377558_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75388729_75388947_75390380_75390480_75391931
ES.35622.27	chr9	+	385	3	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-13	-8604	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	4.5	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTAGTTTATCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	75375884	75380294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380085
ES.35622.28	chr9	+	3100	11	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-9	23817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	13.0464554573263	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGTATTTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	75375888	75417780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75386953_75387087_75388729_75388947_75390380_75390484_75391931_75393958_75417748
ES.35622.29	chr9	+	2443	5	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	3	23817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.1898410623955	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGTATTTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	75375900	75417780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75388729_75388947_75390380_75390484_75391931_75393958_75417748
ES.35622.3	chr9	+	2626	5	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-78	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6077940659284	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375819	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75386950_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.31	chr9	+	4528	8	NIC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-1070	0	intron_retention	FALSE	canonical	0	0	junction_3	15.6453031355766	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75378339	75393963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75379554_75380085_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.32	chr9	+	1351	3	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	77	550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75379486	75389448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75379723_75387367_75387661_75388626
ES.35622.33	chr9	+	2353	1	NIC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-3067	520	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75387065	75389418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75387100_75389400
ES.35622.34	chr9	+	3651	2	NIC	ENSMUSG00000109032.2	novel	2184	3	NA	NA	-1276	-4	intron_retention	FALSE	canonical	3	43	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75388856	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75390480_75391931
ES.35622.4	chr9	+	2759	6	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-77	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.0554700852678	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375820	75393961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_75375966_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.5	chr9	+	3273	11	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-77	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	12.1424873893284	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375820	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390484_75391931
ES.35622.6	chr9	+	3040	9	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-77	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.6264097146678	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTGTGCATTCTCT	NA	False	NA	20	True	AATAAA	-25	NA	75375820	75393967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75379458_75379554_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.7	chr9	+	3291	11	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.7135991518051	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTTATGTGTGTGCA	NA	False	NA	14	True	AATAAA	-19	NA	75375829	75393961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377558_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.8	chr9	+	3635	10	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	-67	1	intron_retention	FALSE	canonical	0	0	junction_5	15.0291897056986	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTATGTGTGTGCATTC	NA	False	NA	17	True	AATAAA	-22	NA	75375830	75393964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75377558_75377649_75379458_75379554_75380085_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
ES.35622.9	chr9	+	2493	4	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-62	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.3095064303001	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGGCTTTATGTGTGTG	NA	False	NA	12	True	AATAAA	-17	NA	75375835	75393959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_75375966_75388729_75388947_75390365_75390484_75391931
ES.35623.1	chr9	+	1811	1	Intergenic	novelGene_29010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAAGCGCAGCA	NA	False	NA	NA	False	NA	NA	NA	75459906	75461717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75459900_75461700
ES.35624.1	chr9	+	2009	7	Antisense	novelGene_ENSMUSG00000110895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACCTCTGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75466663	75498972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_75466817_75488219_75488268_75489858_75489976_75492174_75492340_75493870_75493952_75495024_75495275_75497777
ES.35625.1	chr9	-	175	1	Intergenic	novelGene_29007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACACAA	NA	False	NA	NA	False	NA	NA	NA	75353508	75353333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75353300_75353500
ES.35626.1	chr9	-	4693	9	Antisense	novelGene_ENSMUSG00000042487.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGGACAATGATACAT	462	False	NA	NA	False	NA	NA	NA	75375507	75354090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75354486_75355578_75355677_75356634_75356783_75357767_75357853_75361903_75361999_75362920_75364474_75365354_75365543_75368286_75368384_75373473
ES.35626.10	chr9	-	3749	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5624	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	198.819239511673	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTCCCTTCATGTGTT	NA	False	NA	-1	True	NA	NA	NA	75454613	75405060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452229_75454578
ES.35626.11	chr9	-	3655	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5626	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.938913703993	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATAGTCCCTTCATGTGT	NA	False	NA	-2	True	NA	NA	NA	75454615	75405061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75454576
ES.35626.12	chr9	-	3664	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-31	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	197.640608175547	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATAGTCCCTTCATGT	NA	False	NA	-4	True	NA	NA	NA	75466907	75405063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75466781
ES.35626.13	chr9	-	3872	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5627	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.667931205263	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATAGTCCCTTCATGT	NA	False	NA	-4	True	NA	NA	NA	75454616	75405063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75452132_75452229_75454378
ES.35626.14	chr9	-	4361	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5623	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.645114170002	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATAGTCCCTTCATGT	NA	False	NA	-4	True	NA	NA	NA	75454612	75405063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75453865
ES.35626.15	chr9	-	3702	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	16	-77	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	199.854847326754	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATAGTCCCTTCAT	NA	False	NA	-6	True	NA	NA	NA	75466923	75405065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75409648_75409777_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.17	chr9	-	3439	9	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	2	-82	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	168.766851010499	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATAACTGATAGTCCC	NA	False	NA	-11	True	NA	NA	NA	75466937	75405070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75407433_75412121_75412267_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.18	chr9	-	3514	10	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5936	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	157.926143075384	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATAACTGATAGTCCC	NA	False	NA	-11	True	NA	NA	NA	75454925	75405070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75454838
ES.35626.19	chr9	-	3578	10	Fusion	ENSMUSG00000032186.16_ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5	-83	multi-exon	FALSE	canonical	0	0	junction_9	157.926143075384	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAACTGATAGTCC	NA	False	NA	-12	True	NA	NA	NA	75518457	75405071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75518305
ES.35626.2	chr9	-	614	1	Antisense	novelGene_ENSMUSG00000042487.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75354733	75354119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75354100_75354700
ES.35626.20	chr9	-	3412	10	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	9201	-83	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	203.173768599476	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAACTGATAGTCC	NA	False	NA	-12	True	NA	NA	NA	75439788	75405071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75409704_75409777_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707
ES.35626.21	chr9	-	3580	10	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-2	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	157.122033252289	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAACTGATAGTCC	NA	False	NA	-12	True	NA	NA	NA	75466941	75405071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436656_75436808_75439707_75439875_75466781
ES.35626.22	chr9	-	3612	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-14	-90	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	198.622153849967	545	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTTTTATAACTG	NA	False	NA	-19	True	NA	NA	NA	75466890	75405078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75466781
ES.35626.23	chr9	-	3521	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	2	144	2	-144	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAAGACAGCTACA	NA	False	NA	-73	True	NA	NA	NA	75466937	75405132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.24	chr9	-	3284	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-25	408	-25	-408	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGACTGTTGGTCATTT	NA	False	NA	1	True	AATAAA	-20	NA	75466964	75405396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.25	chr9	-	3425	13	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5626	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	231.849972443868	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454615	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75453209_75453318_75454578
ES.35626.26	chr9	-	3346	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5653	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.938913703993	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454642	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75454576
ES.35626.27	chr9	-	3537	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5626	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.667931205263	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454615	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75452132_75452229_75454378
ES.35626.28	chr9	-	4048	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5644	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.645114170002	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454633	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75453865
ES.35626.29	chr9	-	3427	13	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5623	-409	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	232.084560140384	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454612	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75441054_75441162_75451951_75452036_75452132_75452229_75454572
ES.35626.3	chr9	-	159	1	Intergenic	novelGene_29008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75358078	75357919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75357900_75358100
ES.35626.30	chr9	-	3535	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5644	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	218.938913703993	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75454633	75405397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75454378
ES.35626.31	chr9	-	2931	8	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	2	-410	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	169.888799164726	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCAGACTGTTGGTCAT	NA	False	NA	-1	True	AATAAA	-18	NA	75466937	75405398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75466781
ES.35626.32	chr9	-	6753	1	FSM	ENSMUSG00000058587.10	ENSMUST00000214733.2	2990	1	1314	-5077	1314	-410	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCAGACTGTTGGTCAT	NA	False	NA	-1	True	AATAAA	-18	NA	75412151	75405398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75405400_75412200
ES.35626.33	chr9	-	3359	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5650	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	220.108688403579	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCAGACTGTTGGTCA	NA	False	NA	-2	True	AATAAA	-17	NA	75454639	75405399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75452132_75452229_75454578
ES.35626.34	chr9	-	3322	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	6	-411	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	197.305980649346	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCAGACTGTTGGTCA	NA	False	NA	-2	True	AATAAA	-17	NA	75466933	75405399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75409704_75409777_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.35	chr9	-	3119	9	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	28	-412	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	169.552674337505	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCAGACTGTTGGTC	NA	False	NA	-3	True	AATAAA	-16	NA	75466911	75405400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75407433_75412121_75412267_75414662_75414807_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.36	chr9	-	3353	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	6	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	197.640608175547	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCAGACTGTTGGTC	NA	False	NA	-3	True	AATAAA	-16	NA	75466933	75405400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75466781
ES.35626.38	chr9	-	4230	13	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5621	-412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	232.427706801252	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCAGACTGTTGGTC	NA	False	NA	-3	True	AATAAA	-16	NA	75454610	75405400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75452132_75452229_75453209_75453582_75454049
ES.35626.39	chr9	-	3344	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	198.622153849967	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCAGACTGTTGGTC	NA	False	NA	-3	True	AATAAA	-16	NA	75466944	75405400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75466781
ES.35626.4	chr9	-	4791	2	Antisense	novelGene_ENSMUSG00000042487.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAAGAACATCTTCAAA	9360	False	NA	NA	False	NA	NA	NA	75363867	75358154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75361999_75362920
ES.35626.45	chr9	-	7219	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	9249	-416	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	227.161198271184	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATTAGCAGACTGTT	NA	False	NA	-7	True	AATAAA	-12	NA	75439740	75405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75408421_75408507_75408569_75408870_75409106_75409145_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707
ES.35626.48	chr9	-	3295	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5623	-416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	219.381700646413	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATTAGCAGACTGTT	NA	False	NA	-7	True	AATAAA	-12	NA	75454612	75405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75454590
ES.35626.49	chr9	-	3423	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	8	-416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.381700646413	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATTAGCAGACTGTT	NA	False	NA	-7	True	AATAAA	-12	NA	75466931	75405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75466781
ES.35626.5	chr9	-	5634	1	Antisense	novelGene_ENSMUSG00000042487.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9360	False	NA	NA	False	NA	NA	NA	75363867	75358233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_75358200_75363900
ES.35626.51	chr9	-	3333	13	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5627	-416	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	231.50011999037	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATTAGCAGACTGTT	NA	False	NA	-7	True	AATAAA	-12	NA	75454616	75405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452229_75453865_75453886_75454576
ES.35626.52	chr9	-	3252	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5646	-416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	198.819239511673	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATTAGCAGACTGTT	NA	False	NA	-7	True	AATAAA	-12	NA	75454635	75405404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75454580
ES.35626.53	chr9	-	3131	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-15	551	-15	-551	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCATGCCTTGAAAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	75466954	75405539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.54	chr9	-	3231	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-13	-553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	197.640608175547	544	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTCATGCCTTGAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	75466952	75405541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75466781
ES.35626.55	chr9	-	2460	10	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	4	966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	159.863908171302	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGGTTATCTCTATCA	NA	False	NA	NA	False	AATAAA	-14	NA	75466935	75406186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414802_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.56	chr9	-	2077	8	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	0	898	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	169.888799164726	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTAGTAGATGTTTCC	NA	False	NA	NA	False	NA	NA	NA	75466939	75406254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75466781
ES.35626.57	chr9	-	1739	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-13	1941	-13	223	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGGCTCAGAATCCATT	NA	False	NA	1	True	AATAAA	-16	NA	75466952	75406929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.59	chr9	-	3791	12	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-5627	84	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	219.381700646413	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGCTGACTCAATATT	NA	False	NA	NA	False	AATGAA	-35	NA	75454616	75407068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452036_75452132_75452683_75452888
ES.35626.6	chr9	-	3580	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	8	30034	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	202.303237739785	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATATATGACTTAGTGTA	NA	False	NA	NA	False	TTTAAA	-4	NA	75466931	75374954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75374965_75405081_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418403_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.60	chr9	-	1666	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	4	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	197.640608175547	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTTAAATCAAAAG	NA	False	NA	NA	False	AATGAA	-14	NA	75466935	75407089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75451951_75452056_75466781
ES.35626.61	chr9	-	1510	10	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	-18	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.182534767198	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTTGAGGACCAATAT	NA	False	NA	NA	False	NA	NA	NA	75466894	75407104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75407433_75412121_75412267_75414658_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.62	chr9	-	1139	9	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	27170	2265	9220	-101	3prime_fragment	FALSE	canonical	3	422	junction_2	36.9710613182797	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTACTAGGTAGTA	NA	False	NA	NA	False	NA	NA	NA	75439769	75407253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707
ES.35626.63	chr9	-	2884	9	ISM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-15	5487	-15	0	5prime_fragment	FALSE	canonical	3	422	junction_1	38.5938385626514	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	75466954	75410475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.64	chr9	-	3059	2	FSM	ENSMUSG00000058587.10	ENSMUST00000217459.2	3918	2	-5	864	-5	-864	multi-exon	FALSE	canonical	3	524	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTATAATACATCTCAC	NA	False	NA	NA	False	TTTAAA	-27	NA	75466944	75436978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75439875_75466781
ES.35626.65	chr9	-	1619	2	FSM	ENSMUSG00000058587.10	ENSMUST00000217459.2	3918	2	20	2279	20	-2279	multi-exon	FALSE	canonical	3	524	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTCTTCAGGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	75466919	75438393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75439875_75466781
ES.35626.66	chr9	-	539	2	FSM	ENSMUSG00000058587.10	ENSMUST00000217459.2	3918	2	4	3375	4	-3375	multi-exon	FALSE	canonical	3	524	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTTACCTTTGTGTAA	NA	False	NA	NA	False	ATTAAA	-27	NA	75466935	75439489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75439875_75466781
ES.35626.67	chr9	-	240	1	Intergenic	novelGene_29009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTACTTATATGTGA	NA	False	NA	NA	False	NA	NA	NA	75443714	75443474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75443500_75443700
ES.35626.68	chr9	-	1085	1	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	2	-29738	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAACCACAGTCATCT	NA	False	NA	NA	False	NA	NA	NA	75466937	75465852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75465900_75466900
ES.35626.69	chr9	-	9622	11	NNC	ENSMUSG00000032186.16	novel	9871	10	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.61891229734916	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGTTCCTGGCTACTC	NA	False	NA	2	True	AATAAA	-19	NA	75518398	75472902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75480383_75480444_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.7	chr9	-	3683	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	-17	1	-17	-1	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCTGTATGCCACATT	NA	False	NA	70	True	AATAAA	-29	NA	75466956	75404989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35626.70	chr9	-	5531	2	NNC	ENSMUSG00000032186.16	novel	9884	10	NA	NA	26398	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCCTGGTTCCTGGCTA	NA	False	NA	-1	True	AATAAA	-16	NA	75478535	75472905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75477846_75477944
ES.35626.71	chr9	-	3619	11	NNC	ENSMUSG00000032186.16	novel	1921	11	NA	NA	4	1945	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.61891229734916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGAGTCACCCCCAA	NA	False	NA	NA	False	AATAAA	-15	NA	75518418	75478925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75480383_75480444_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.72	chr9	-	2389	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	129	7353	-4	615	multi-exon	FALSE	canonical	3	14	junction_9	3.42467444609388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCAAAGTTTCTGATAC	NA	False	NA	NA	False	TTTAAA	-13	NA	75518456	75480255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.73	chr9	-	1747	10	FSM	ENSMUSG00000032186.16	ENSMUST00000064433.11	9884	10	172	7965	-13	0	multi-exon	FALSE	canonical	0	0	junction_9	6.87992248018343	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCTCTACATGCACAT	NA	False	NA	NA	False	NA	NA	NA	75518435	75480870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504679_75518305
ES.35626.74	chr9	-	1558	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	-21	8334	1	-139	multi-exon	FALSE	canonical	3	14	junction_9	3.42467444609388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTTTTAGCGCTAATT	NA	False	NA	NA	False	NA	NA	NA	75518606	75481236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.75	chr9	-	2031	9	NNC	ENSMUSG00000032186.16	novel	1564	7	NA	NA	2	-3515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.90224690738243	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCAATCTATTTCTTT	NA	False	NA	NA	False	AATAAA	-34	NA	75518401	75484612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_75485571_75487356_75487535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.76	chr9	-	3567	7	FSM	ENSMUSG00000032186.16	ENSMUST00000215462.2	1564	7	2	-2005	2	2005	multi-exon	FALSE	canonical	3	14	junction_6	3.4960294939005	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTGCCATTCCATC	NA	False	NA	NA	False	AATAAA	-14	NA	75518401	75486439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ES.35626.8	chr9	-	3129	7	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	12304	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	180.360441585423	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGCTGTATGCCACATT	NA	False	NA	70	True	AATAAA	-29	NA	75436685	75404989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75423754_75423878_75436650
ES.35626.9	chr9	-	8337	9	NIC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	2	-17	intron_retention	FALSE	canonical	3	422	junction_1	38.5938385626514	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGTCTGAAAAAAATATT	NA	False	NA	54	True	AATAAA	-13	NA	75466937	75405005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ES.35627.1	chr9	+	1632	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-442	-1	-442	1	multi-exon	FALSE	canonical	3	61	junction_2	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTCATTTCTCTTATTT	NA	False	NA	8	True	AATAAA	-18	NA	75532580	75545054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75533320_75542667_75543000_75544493
ES.35627.2	chr9	+	1512	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	-20	-303	-20	303	multi-exon	FALSE	canonical	3	61	junction_2	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATCTTGCCATTTATT	NA	False	NA	NA	False	TTTAAA	-22	NA	75533002	75545356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_75533320_75542667_75543000_75544493
ES.35628.1	chr9	-	151	1	Intergenic	novelGene_29011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75543838	75543687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75543700_75543800
ES.35629.1	chr9	+	2900	1	Intergenic	novelGene_29019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGGAGGGGACCCGAT	NA	False	NA	NA	False	NA	NA	NA	75640178	75643078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75640200_75643100
ES.35629.2	chr9	+	2741	1	Intergenic	novelGene_29018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCGGCCGCCAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	75640178	75642919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75640200_75642900
ES.35629.3	chr9	+	2260	1	Intergenic	novelGene_29017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCCAGAGAGATATTTC	NA	False	NA	NA	False	NA	NA	NA	75640178	75642438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75640200_75642400
ES.3563.1	chr10	-	6604	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-170	-1	-62	1	multi-exon	TRUE	canonical	3	61	junction_15	13.5705476423617	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCGGGATCCTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	90918694	90825171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.12	chr10	-	6382	26	NIC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_3	22.0593381587028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90918601	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90827459_90831509_90831657_90833073_90833200_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.13	chr10	-	6041	27	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_26	21.8790380888262	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90918592	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918502
ES.3563.15	chr10	-	4816	10	NIC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-31300	0	intron_retention	FALSE	canonical	3	77	junction_7	10.6712952920382	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90867573	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410
ES.3563.17	chr10	-	6052	27	NNC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_26	21.8790380888262	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTTGGTTTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	90918597	90825179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918491
ES.3563.18	chr10	-	6122	28	NNC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	32	0	intron_retention	FALSE	canonical	0	0	junction_27	24.825812930382	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTTGGTTTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	90918600	90825179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044_90918069_90918491
ES.3563.2	chr10	-	5216	18	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	25615	0	intron_retention	FALSE	canonical	0	0	junction_11	32.9457979951364	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90892676	90825172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90869210_90869246_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776
ES.3563.20	chr10	-	3533	11	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-36582	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	40.1492216611979	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAACATTTTGGTTTCGG	NA	False	NA	NA	False	AATAAA	-17	NA	90872855	90825180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835641_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771
ES.3563.22	chr10	-	3866	14	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-39498	-3	intron_retention	FALSE	canonical	0	0	junction_12	37.4379170512476	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAACATTTTGGTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	90875771	90825182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875038_90875079_90875646
ES.3563.23	chr10	-	4898	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-132	1667	-24	-376	multi-exon	FALSE	canonical	3	61	junction_15	13.5705476423617	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTAAGATATTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	90918656	90826839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.24	chr10	-	3399	12	NIC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-39499	-379	intron_retention	FALSE	canonical	3	77	junction_7	10.5611168956055	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGCTTTAAGATATTG	NA	False	NA	NA	False	AATAAA	-22	NA	90875772	90826842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646
ES.3563.25	chr10	-	4532	17	ISM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	61	40799	-5	-33377	5prime_fragment	FALSE	canonical	3	23	junction_16	19.7973127911341	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTTCTTGCTTTTTC	NA	False	NA	NA	False	GATAAA	-28	NA	90918571	90865978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.26	chr10	-	4467	17	ISM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-25	40806	17	-33377	5prime_fragment	FALSE	canonical	3	61	junction_5	12.9270791364484	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTTTCTTGCTTTTTC	NA	False	NA	NA	False	GATAAA	-28	NA	90918549	90865978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.27	chr10	-	4018	17	ISM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	-71	41301	-29	-33872	5prime_fragment	FALSE	canonical	3	61	junction_5	12.9270791364484	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGTCTCATGCTGACA	NA	False	NA	NA	False	AATAAA	-19	NA	90918595	90866473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.28	chr10	-	4041	17	ISM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	32	41319	32	-33897	5prime_fragment	FALSE	canonical	3	23	junction_16	19.7973127911341	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAGACAAAAAA	NA	False	NA	NA	False	AATGAA	-23	NA	90918600	90866498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.29	chr10	-	3800	17	ISM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	2	41590	2	-34168	5prime_fragment	FALSE	canonical	3	23	junction_16	19.7973127911341	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGTATTGTGTCTGT	NA	False	NA	NA	False	TTTAAA	-16	NA	90918630	90866769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.3	chr10	-	6635	27	FSM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	-51	-7	-51	0	multi-exon	FALSE	canonical	3	23	junction_26	18.4606169641815	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918683	90825172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.30	chr10	-	3151	16	NNC	ENSMUSG00000019979.13	novel	1596	5	NA	NA	16	27020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.0781449213124	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGTGTGTTTGTCATT	NA	False	NA	NA	False	TATAAA	-40	NA	90918550	90874233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90874594_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.31	chr10	-	2409	11	NNC	ENSMUSG00000019979.13	novel	2710	5	NA	NA	-9	7501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.8933683874859	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGTGTGCTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	90918575	90893752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90894073_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.32	chr10	-	3599	8	NIC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	14	6030	intron_retention	FALSE	canonical	3	23	junction_7	23.0615856933967	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90918552	90895223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90895603_90895909_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.33	chr10	-	1750	5	FSM	ENSMUSG00000019979.13	ENSMUST00000161987.8	2710	5	-304	1264	-29	234	multi-exon	FALSE	canonical	3	68	junction_4	12.1449578014911	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAATCCATCATTAT	NA	False	NA	NA	False	NA	NA	NA	90918595	90902517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.34	chr10	-	1637	5	FSM	ENSMUSG00000019979.13	ENSMUST00000161987.8	2710	5	-304	1377	-29	121	multi-exon	FALSE	canonical	3	68	junction_4	12.1449578014911	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGGAAGGATTTCTTA	NA	False	NA	NA	False	GATAAA	-13	NA	90918595	90902630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.35	chr10	-	1377	4	NIC	ENSMUSG00000019979.13	novel	1596	5	NA	NA	20	46	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	34.4705993887867	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATTGTTTCTATTGGA	NA	False	NA	NA	False	AATACA	-15	NA	90918612	90902705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90903127_90913395_90913594_90915308_90915499_90918044
ES.3563.4	chr10	-	6464	28	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	13	0	intron_retention	FALSE	non_canonical	0	0	junction_27	21.8332626518505	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918619	90825172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044_90918195_90918258
ES.3563.5	chr10	-	6443	27	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_10	22.2286730446386	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918554	90825172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859691_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.6	chr10	-	6421	26	NIC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	-29	0	intron_retention	FALSE	canonical	1	5	junction_11	24.7180581761594	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918595	90825172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.7	chr10	-	8714	27	NNC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	28	0	intron_retention	FALSE	non_canonical	0	0	junction_17	25.2940107979838	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90918604	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90894051_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ES.3563.8	chr10	-	6532	27	NNC	ENSMUSG00000019979.13	novel	6433	27	NA	NA	-5	0	intron_retention	FALSE	canonical	1	5	junction_19	21.4922925499644	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90918637	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895921_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ES.3563.9	chr10	-	6490	27	NNC	ENSMUSG00000019979.13	novel	6577	27	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_26	21.8790380888262	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGTTTCGGGATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	90918606	90825174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915928_90918044
ES.35630.1	chr9	-	4640	2	Intergenic	novelGene_29012	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTGTCTTAGCTCC	183	False	NA	NA	False	NA	NA	NA	75643046	75637748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75637961_75638618
ES.35630.2	chr9	-	3827	1	Intergenic	novelGene_29013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTCTGCTTTCCT	182	False	NA	NA	False	NA	NA	NA	75643047	75639220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75639200_75643000
ES.35630.3	chr9	-	3167	1	Intergenic	novelGene_29014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTACTTGTCATTTTTC	183	False	NA	NA	False	NA	NA	NA	75643046	75639879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75639900_75643000
ES.35630.4	chr9	-	3041	1	Intergenic	novelGene_29015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGGTTTTCTCCACA	183	False	NA	NA	False	NA	NA	NA	75643046	75640005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75640000_75643000
ES.35630.5	chr9	-	2914	1	Intergenic	novelGene_29016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACTATTTAGTGCATTC	143	False	NA	NA	False	NA	NA	NA	75643086	75640172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75640200_75643100
ES.35630.6	chr9	-	2649	1	Intergenic	novelGene_29020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATTATGC	183	False	NA	NA	False	NA	NA	NA	75643046	75640397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75640400_75643000
ES.35630.7	chr9	-	2381	1	Intergenic	novelGene_29021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTAAAGTCATTTT	169	False	NA	NA	False	NA	NA	NA	75643060	75640679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_75640700_75643100
ES.35631.1	chr9	+	169	1	Intergenic	novelGene_29022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75962879	75963048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_75962900_75963000
ES.35632.1	chr9	+	1426	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7121	791	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGTCCTCTAATAAGT	NA	False	NA	NA	False	NA	NA	NA	76219737	76228919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_76219851_76226917_76227020_76227708
ES.35632.2	chr9	+	1264	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-7062	471	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTTTATAACTATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	76219796	76228599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_76219851_76226917_76227237_76227708
ES.35632.3	chr9	+	704	4	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-5426	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.67241208569794	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCAGACTTGACAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	76221432	76228127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_76221574_76226281_76226324_76226917_76227020_76227708
ES.35632.4	chr9	+	5985	2	FSM	ENSMUSG00000098894.2	ENSMUST00000183362.2	581	2	-5406	2	-5406	-2	multi-exon	FALSE	canonical	3	21	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGCAGACTTGACAGT	NA	False	NA	NA	False	AATAAA	-20	NA	76221452	76228126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_76227020_76227708
ES.35632.5	chr9	+	7172	1	Genic_Genomic	ENSMUSG00000098894.2	novel	NA	NA	NA	NA	-5406	496	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	76221452	76228624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_76221500_76228600
ES.35632.6	chr9	+	6668	1	Genic_Genomic	ENSMUSG00000098894.2	novel	NA	NA	NA	NA	-5404	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTTTGCAGACTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	76221454	76228122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_76221500_76228100
ES.35632.7	chr9	+	716	3	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-5383	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCAGACTTGACAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	76221475	76228127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_76221671_76226917_76227020_76227708
ES.35632.8	chr9	+	2276	2	NNC	ENSMUSG00000098894.2	novel	581	2	NA	NA	-3530	465	intron_retention	FALSE	canonical	3	3	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGAAGGTTTATAAC	NA	False	NA	NA	False	AATAAA	-11	NA	76223328	76228593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_76223929_76226917
ES.35633.1	chr9	-	3841	8	FSM	ENSMUSG00000032360.17	ENSMUST00000063140.15	3761	8	-77	-3	-77	3	multi-exon	FALSE	canonical	0	0	junction_1	1.0690449676497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAATCGAATATTATTT	NA	False	NA	NA	False	NA	NA	NA	76230970	76133158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_76135488_76137785_76138009_76140181_76140304_76143450_76143672_76153628_76153745_76161742_76161987_76166933_76167113_76230563
ES.35634.1	chr9	+	2864	1	Intergenic	novelGene_29023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAAATAATCCAA	NA	False	NA	NA	False	NA	NA	NA	76453139	76456003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_76453100_76456000
ES.35635.1	chr9	-	6464	5	FSM	ENSMUSG00000032358.13	ENSMUST00000183437.8	3879	5	10	-2595	10	2595	multi-exon	FALSE	canonical	1	2	junction_4	1.87082869338697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTGAGTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76474388	76394740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76474345
ES.35635.2	chr9	-	3550	5	FSM	ENSMUSG00000032358.13	ENSMUST00000183437.8	3879	5	-159	488	-159	163	multi-exon	FALSE	canonical	1	2	junction_4	1.87082869338697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGGGATTCATTGTGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	76474557	76397823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76474345
ES.35635.3	chr9	-	3481	6	NNC	ENSMUSG00000032358.13	novel	3879	5	NA	NA	16	157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.78567765543682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTAGATGGGATTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	76474382	76397829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621_76453126_76465377_76465490_76474345
ES.35636.1	chr9	+	180	1	Intergenic	novelGene_29024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATGGCAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	76492671	76492851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_76492700_76492900
ES.35637.1	chr9	+	176	1	Intergenic	novelGene_29025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGCCTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	77075508	77075684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77075500_77075700
ES.35638.1	chr9	+	5274	1	Intergenic	novelGene_29026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAAAAAAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	77382452	77387726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77382500_77387700
ES.35639.1	chr9	+	163	1	Intergenic	novelGene_29027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	77400582	77400745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77400600_77400700
ES.3564.1	chr10	+	3363	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-125	-6	-8	6	multi-exon	FALSE	canonical	3	50	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTACTGTCCATTTATTT	630	False	NA	19	True	AATAAA	-25	NA	90918793	90934525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90931645
ES.3564.10	chr10	+	3621	4	NNC	ENSMUSG00000019975.13	novel	3232	3	NA	NA	-11	445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.4682888230213	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGCACCTAATTATT	744	False	NA	NA	False	AATAAA	-12	NA	90918907	90934964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931645_90933029_90933095
ES.3564.11	chr10	+	3623	3	NNC	ENSMUSG00000019975.13	novel	3232	3	NA	NA	-11	449	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	49.5	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCACCTAATTATTTGTA	744	False	NA	NA	False	AATAAA	-16	NA	90918907	90934968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931714
ES.3564.12	chr10	+	3210	3	NNC	ENSMUSG00000019975.13	novel	3232	3	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGAGTACTGTCCATT	751	False	NA	14	True	AATAAA	-20	NA	90918914	90934520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931672
ES.3564.13	chr10	+	3103	4	NNC	ENSMUSG00000019975.13	novel	3232	3	NA	NA	7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.4682888230213	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTCCATAATATTT	762	False	NA	16	True	AATAAA	-21	NA	90918925	90938473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931645_90933541_90937616
ES.3564.14	chr10	+	157	1	Intergenic	novelGene_2724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAATAAATAAATATTAA	8032	False	NA	NA	False	NA	NA	NA	90926195	90926352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_90926200_90926400
ES.3564.15	chr10	+	1687	1	Genic_Genomic	ENSMUSG00000019975.13	novel	NA	NA	NA	NA	496	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTCCATAATATTTT	42	False	NA	17	True	AATAAA	-22	NA	90936787	90938474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_90936800_90938500
ES.3564.2	chr10	+	3217	5	NNC	ENSMUSG00000019975.13	novel	1328	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.9738292452511	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTGCTCCATAAT	711	False	NA	12	True	AATAAA	-17	NA	90918874	90938469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931645_90933541_90936137_90936205_90937616
ES.3564.3	chr10	+	2155	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-30	1107	-30	-1107	multi-exon	FALSE	canonical	3	50	junction_2	27	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTACATCATTATTTTA	725	False	NA	NA	False	AATAAA	-14	NA	90918888	90933412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90931645
ES.3564.4	chr10	+	3695	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-14	-449	-14	449	multi-exon	FALSE	canonical	3	50	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCACCTAATTATTTGTA	741	False	NA	NA	False	AATAAA	-16	NA	90918904	90934968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90931645
ES.3564.5	chr10	+	3199	4	NNC	ENSMUSG00000019975.13	novel	3232	3	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.4682888230213	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATAGAGAGTACTGTC	743	False	NA	10	True	AATAAA	-16	NA	90918906	90934516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_90919159_90929000_90929119_90931645_90932037_90932078
ES.3564.6	chr10	+	2588	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-12	656	-12	-656	multi-exon	FALSE	canonical	3	50	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAATAAAAAATAAAAA	743	False	NA	NA	False	NA	NA	NA	90918906	90933863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90931645
ES.3564.7	chr10	+	2688	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	-11	555	-11	-555	multi-exon	FALSE	canonical	3	50	junction_2	27	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTGTGTCTGTGTATT	744	False	NA	NA	False	AAAACA	-21	NA	90918907	90933964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90931645
ES.3564.8	chr10	+	1224	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	106	-2	-11	2	multi-exon	FALSE	canonical	3	39	junction_2	32.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTTGCTCCATAATAT	744	False	NA	14	True	AATAAA	-19	NA	90918907	90938471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_90919159_90929000_90929119_90937616
ES.3564.9	chr10	+	1106	2	NIC	ENSMUSG00000019975.13	novel	1328	3	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTTGCTCCATAATAT	744	False	NA	14	True	AATAAA	-19	NA	90918907	90938471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_90919159_90937616
ES.35640.1	chr9	-	3343	17	Fusion	ENSMUSG00000099170.2_ENSMUSG00000032352.17	novel	355	5	NA	NA	-31	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	19.0816502168969	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTCTTGCCTTTGTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	77452183	77273697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_77274727_77274954_77275403_77291404_77291498_77296233_77296313_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
ES.35640.2	chr9	-	572	2	NNC	ENSMUSG00000099170.2	novel	2033	4	NA	NA	22164	-1328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGTTATGGGCTTAC	NA	False	NA	NA	False	AATAAA	-11	NA	77284536	77275021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_77275403_77284345
ES.35640.5	chr9	-	3158	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-39	2	-39	-2	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCATAGCTTTTTAAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	77452191	77338106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
ES.35640.6	chr9	-	2902	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-40	259	-40	7	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAAATGTTGCTATCTC	NA	False	NA	NA	False	AATAAA	-21	NA	77452192	77338363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
ES.35640.7	chr9	-	2095	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	-39	1065	-39	-799	multi-exon	FALSE	canonical	3	32	junction_5	6.66972316521396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCGTTTTTGTCTTGTG	NA	False	NA	0	True	AATACA	-17	NA	77452191	77339169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
ES.35641.1	chr9	-	152	1	Intergenic	novelGene_29028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATGTATTTCAAAATTG	NA	False	NA	NA	False	NA	NA	NA	77659702	77659550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_77659600_77659700
ES.35642.1	chr9	+	4538	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-110	-127	intron_retention	FALSE	canonical	3	228	junction_1	21.646144126739	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCTCTATATCTCAT	4310	False	NA	25	True	AATAAA	-30	NA	77661706	77701640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.10	chr9	+	4014	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-1	-134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.5419937080386	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGAATTGGCTCTAT	4419	False	NA	18	True	AATAAA	-23	NA	77661815	77701633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77687641_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.11	chr9	+	8056	12	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	-129	intron_retention	FALSE	canonical	3	228	junction_1	21.1933250056094	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGGCTCTATATCTC	4420	False	NA	23	True	AATAAA	-28	NA	77661816	77701638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77692691_77693031_77693149_77693992_77694132_77694558_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.12	chr9	+	3857	15	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	70.2357546018393	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4420	False	NA	18	True	AATAAA	-45	NA	77661816	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699086_77699161_77699266_77699334_77699456_77700321
ES.35642.13	chr9	+	3170	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	-132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	71.8206382708526	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAATTGGCTCTATAT	4420	False	NA	20	True	AATAAA	-25	NA	77661816	77701635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77700321
ES.35642.15	chr9	+	5384	15	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_9	94.9286789207174	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4422	False	NA	15	True	AATAAA	-42	NA	77661818	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694232_77694437_77694532_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.17	chr9	+	3845	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-3	intron_retention	FALSE	canonical	3	228	junction_1	21.0504738421631	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4422	False	NA	15	True	AATAAA	-42	NA	77661818	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.18	chr9	+	3491	18	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-143	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	103.267281788034	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTTTCAATACTAGAAT	4422	False	NA	9	True	AATAAA	-14	NA	77661818	77701624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77671363_77671444_77673448_77673582_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.19	chr9	+	3703	15	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-140	intron_retention	FALSE	canonical	0	0	junction_3	71.7720669330119	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTCAATACTAGAATTGG	4422	False	NA	12	True	AATAAA	-17	NA	77661818	77701627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686808_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.2	chr9	+	8477	11	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-14	-127	intron_retention	FALSE	canonical	3	228	junction_1	23.502340308999	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCTCTATATCTCAT	4406	False	NA	25	True	AATAAA	-30	NA	77661802	77701640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77692691_77693031_77693149_77693992_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.20	chr9	+	3445	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.5063226540499	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4422	False	NA	15	True	AATAAA	-42	NA	77661818	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688488_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.21	chr9	+	5457	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-127	intron_retention	FALSE	canonical	3	228	junction_1	21.646144126739	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCTCTATATCTCAT	4422	False	NA	25	True	AATAAA	-30	NA	77661818	77701640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.23	chr9	+	4130	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	-6	intron_retention	FALSE	canonical	3	228	junction_1	21.2118087018143	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGTAGTACGTGTAT	4422	False	NA	12	True	AATAAA	-39	NA	77661818	77701761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.24	chr9	+	4497	17	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	117.014355422743	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4422	False	NA	18	True	AATAAA	-45	NA	77661818	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77668627_77668748_77670450_77670612_77671363_77671444_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.25	chr9	+	3490	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	228	junction_1	20.9411225163528	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4422	False	NA	18	True	AATAAA	-45	NA	77661818	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.26	chr9	+	3709	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	228	junction_1	20.4605144867187	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4422	False	NA	18	True	AATAAA	-45	NA	77661818	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.27	chr9	+	4228	18	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	114.889084468908	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4422	False	NA	18	True	AATAAA	-45	NA	77661818	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77670450_77670612_77671363_77671444_77673448_77673588_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.28	chr9	+	2523	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	5	895	5	-895	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTACTGTAAATCTT	4425	False	NA	NA	False	NA	NA	NA	77661821	77700872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.29	chr9	+	1750	1	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	13	-23248	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCCCTGTTGGCAGGA	4433	False	NA	NA	False	NA	NA	NA	77661829	77663579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77661800_77663600
ES.35642.3	chr9	+	3429	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	-3	-3	-3	3	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACGTGTATGAGTGGCTT	4417	False	NA	21	True	AATAAA	-24	NA	77661813	77701770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.30	chr9	+	4196	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	13	2	intron_retention	FALSE	canonical	3	228	junction_1	21.9924229376089	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACGTGTATGAGTGGCT	4433	False	NA	20	True	AATAAA	-23	NA	77661829	77701769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.31	chr9	+	3465	16	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	26	-134	intron_retention	FALSE	canonical	0	0	junction_1	93.0946949198622	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGAATTGGCTCTAT	4446	False	NA	18	True	AATAAA	-23	NA	77661842	77701633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77673448_77673582_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.32	chr9	+	5325	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	39	-3	intron_retention	FALSE	canonical	3	228	junction_1	22.067447116108	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4459	False	NA	15	True	AATAAA	-42	NA	77661855	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.33	chr9	+	3456	17	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	39	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.1689386651523	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAAAGGTAGTACGTGT	4459	False	NA	10	True	AATAAA	-37	NA	77661855	77701759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77671363_77671444_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.34	chr9	+	3542	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	39	-130	intron_retention	FALSE	canonical	3	228	junction_1	20.4605144867187	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAATTGGCTCTATATCT	4459	False	NA	22	True	AATAAA	-27	NA	77661855	77701637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.35	chr9	+	7346	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	40	-3	intron_retention	FALSE	canonical	3	228	junction_1	20.9922240219505	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4460	False	NA	15	True	AATAAA	-42	NA	77661856	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.36	chr9	+	3729	17	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	40	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.4236556438635	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4460	False	NA	15	True	AATAAA	-42	NA	77661856	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77687641_77687991_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.37	chr9	+	3751	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	40	-129	intron_retention	FALSE	canonical	0	0	junction_2	93.0429769276304	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGGCTCTATATCTC	4460	False	NA	23	True	AATAAA	-28	NA	77661856	77701638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77671363_77671444_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.39	chr9	+	3611	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	40	-129	intron_retention	FALSE	canonical	3	228	junction_1	21.1447532904968	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGGCTCTATATCTC	4460	False	NA	23	True	AATAAA	-28	NA	77661856	77701638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.41	chr9	+	3634	19	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	42	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.560230790255	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCTCTATATCTCAT	4462	False	NA	25	True	AATAAA	-30	NA	77661858	77701640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77670450_77670612_77671363_77671444_77673448_77673588_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.42	chr9	+	3965	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	45	-128	intron_retention	FALSE	canonical	3	228	junction_1	21.2118087018143	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCTCTATATCTCA	4465	False	NA	24	True	AATAAA	-29	NA	77661861	77701639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.43	chr9	+	4445	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	45	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	69.5419937080386	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGTAGTACGTGTAT	4465	False	NA	12	True	AATAAA	-39	NA	77661861	77701761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77687991_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.44	chr9	+	4082	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	46	0	intron_retention	FALSE	canonical	3	228	junction_1	20.8062348416051	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4466	False	NA	18	True	AATAAA	-45	NA	77661862	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.45	chr9	+	3249	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	46	128	46	-128	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCTCTATATCTCA	4466	False	NA	24	True	AATAAA	-29	NA	77661862	77701639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.46	chr9	+	3946	21	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.856317965617	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4472	False	NA	18	True	AATAAA	-45	NA	77661868	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77670450_77670701_77671363_77671444_77673448_77673582_77674471_77674504_77674590_77674671_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.47	chr9	+	3200	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	52	-129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	69.5419937080387	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGGCTCTATATCTC	4472	False	NA	23	True	AATAAA	-28	NA	77661868	77701638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694630_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.48	chr9	+	4504	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	52	-132	intron_retention	FALSE	canonical	0	0	junction_1	98.5121264274324	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAATTGGCTCTATAT	4472	False	NA	20	True	AATAAA	-25	NA	77661868	77701635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77673448_77673582_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.5	chr9	+	3420	17	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-3	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.4930073265332	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCTCTATATCTCATT	4417	False	NA	26	True	AATAAA	-31	NA	77661813	77701641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77668627_77668748_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.50	chr9	+	7625	14	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	62	-129	intron_retention	FALSE	canonical	3	228	junction_1	21.7734434630053	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGGCTCTATATCTC	4482	False	NA	23	True	AATAAA	-28	NA	77661878	77701638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.51	chr9	+	5586	12	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	66	-3	intron_retention	FALSE	canonical	3	228	junction_1	22.479375303811	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAGTACGTGTATGAG	4486	False	NA	15	True	AATAAA	-42	NA	77661882	77701764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.53	chr9	+	3538	17	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	81	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	88.817843787158	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAAAGGTAGTACGTGT	4501	False	NA	10	True	AATAAA	-37	NA	77661897	77701759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694232_77694437_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.54	chr9	+	3206	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	81	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.3082005729962	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCTCTATATCTCA	4501	False	NA	24	True	AATAAA	-29	NA	77661897	77701639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662234_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.55	chr9	+	4104	15	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	85	-143	intron_retention	FALSE	canonical	1	1	junction_9	93.7385639283371	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTTTCAATACTAGAAT	4505	False	NA	9	True	AATAAA	-14	NA	77661901	77701624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694232_77694437_77694558_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.56	chr9	+	2985	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	231	-128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.3082005729962	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCTCTATATCTCA	4651	False	NA	24	True	AATAAA	-29	NA	77662047	77701639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662188_77682385_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.57	chr9	+	3549	19	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	254	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.560230790255	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4674	False	NA	18	True	AATAAA	-45	NA	77662070	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77670450_77670612_77671363_77671444_77673448_77673588_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.58	chr9	+	1523	1	Genic_Genomic	ENSMUSG00000032350.10	novel	NA	NA	NA	NA	-576	-14616	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGGAGTTTATTCTGT	NA	False	NA	NA	False	NA	NA	NA	77670688	77672211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_77670700_77672200
ES.35642.59	chr9	+	3468	3	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	23936	-5	intron_retention	FALSE	canonical	3	258	junction_1	3	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGTAGTACGTGTATG	NA	False	NA	13	True	AATAAA	-40	NA	77697359	77701762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77699266_77699334_77699456_77700321
ES.35642.6	chr9	+	4557	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	228	junction_1	21.646144126739	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4418	False	NA	18	True	AATAAA	-45	NA	77661814	77701767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.60	chr9	+	1304	1	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	26897	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTTTCAATACTAGAAT	NA	False	NA	9	True	AATAAA	-14	NA	77700320	77701624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77700300_77701600
ES.35642.7	chr9	+	3420	16	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	69.5419937080386	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTACGTGTATGAGTGGC	4418	False	NA	19	True	AATAAA	-22	NA	77661814	77701768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686912_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35642.8	chr9	+	4194	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	228	junction_1	21.5271146851283	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTAGTACGTGTATGA	4419	False	NA	14	True	AATAAA	-41	NA	77661815	77701763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77695575_77698996_77699079_77699161_77699456_77700321
ES.35642.9	chr9	+	4020	15	NNC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	-1	3	intron_retention	FALSE	canonical	2	7	junction_9	69.38553192717	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACGTGTATGAGTGGCTT	4419	False	NA	21	True	AATAAA	-24	NA	77661815	77701770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694437_77694558_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ES.35643.1	chr9	+	168	1	Intergenic	novelGene_29029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	77702900	77703068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77702900_77703100
ES.35644.1	chr9	-	180	1	Intergenic	novelGene_29030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	77750124	77749944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_77749900_77750100
ES.35645.1	chr9	+	881	1	Intergenic	novelGene_29031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAGACTCCCGAAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	77818193	77819074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77818200_77819100
ES.35646.1	chr9	+	2947	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	-163	-2	-163	2	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTCTGTTGTTTGAT	NA	False	NA	13	True	ATTAAA	-21	NA	77824482	77891803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.10	chr9	+	2874	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	252.404654028011	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824703	77891801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889259_77889410_77889946
ES.35646.11	chr9	+	2857	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	242.341152871319	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCGTGCTGTGTCTTCTG	NA	False	NA	4	True	ATTAAA	-12	NA	77824709	77891794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77829157_77829304_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.12	chr9	+	2633	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	192.749189362757	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824710	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946_77891205_77891285
ES.35646.13	chr9	+	173	1	Intergenic	novelGene_29032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAAACAACAACA	2967	False	NA	NA	False	NA	NA	NA	77841860	77842033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77841900_77842000
ES.35646.14	chr9	+	2507	6	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	34116	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.738183068882	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77882688	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77882834_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.15	chr9	+	2286	4	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	59382	3	35455	-3	3prime_fragment	FALSE	canonical	3	515	junction_2	27.3130005674953	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77884027	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.17	chr9	+	4448	1	NIC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	38770	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTACCCGTGCTGTGTCT	NA	False	NA	0	True	ATTAAA	-8	NA	77887342	77891790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77887300_77891800
ES.35646.18	chr9	+	1250	2	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	41692	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGTCTTCTGT	NA	False	NA	5	True	ATTAAA	-13	NA	77890264	77891795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77891354_77891634
ES.35646.2	chr9	+	5679	7	NIC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	515	junction_5	47.772609539591	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824653	77891801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77887232_77888755_77888891_77889946
ES.35646.4	chr9	+	2817	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	246.612265256617	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824664	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77848639_77848697_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.5	chr9	+	8074	5	NIC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	19	-3	intron_retention	FALSE	canonical	3	527	junction_4	45.395484356927	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824664	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77888891_77889946
ES.35646.6	chr9	+	4284	7	NIC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	19	-3	intron_retention	FALSE	canonical	3	527	junction_6	41.5628707168095	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824664	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77888891_77889946
ES.35646.7	chr9	+	2716	8	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.117185861824	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824688	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824789_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.8	chr9	+	2897	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	246.612265256617	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGTGTCTTCTGTTGT	NA	False	NA	8	True	ATTAAA	-16	NA	77824692	77891798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77832440_77832606_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ES.35646.9	chr9	+	2762	10	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	264.557818833942	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGTCTTCTGT	NA	False	NA	5	True	ATTAAA	-13	NA	77824697	77891795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_77824809_77829157_77829304_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946_77891164_77891271
ES.35647.1	chr9	-	176	1	Intergenic	novelGene_29033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGGTTCGAGAC	NA	False	NA	NA	False	NA	NA	NA	77906256	77906080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_77906100_77906300
ES.35648.1	chr9	+	3201	6	FSM	ENSMUSG00000023333.9	ENSMUST00000024104.9	2068	6	10	-1143	10	1143	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTCTGTGTGTGGTTT	2059	False	NA	NA	False	ATTAAA	-20	NA	77959215	77974049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_77959323_77961093_77961274_77966857_77967111_77968629_77968743_77969692_77969822_77971630
ES.35648.2	chr9	+	176	1	Intergenic	novelGene_29035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	1236	False	NA	NA	False	NA	NA	NA	77963540	77963716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77963500_77963700
ES.35649.1	chr9	-	175	1	Intergenic	novelGene_29034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTCTAAAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	77960700	77960525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_77960500_77960700
ES.3565.1	chr10	-	159	1	Intergenic	novelGene_2725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	90940621	90940462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_90940500_90940600
ES.35650.1	chr9	+	233	1	Intergenic	novelGene_29036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCATAATCTTGA	NA	False	NA	NA	False	NA	NA	NA	77975250	77975483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_77975200_77975500
ES.35651.1	chr9	+	181	1	Intergenic	novelGene_29037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	78007934	78008115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78007900_78008100
ES.35652.10	chr9	+	2613	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-120	4067	-46	102	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATTTTTTGTTCATTG	NA	False	NA	105	True	AATGAA	-14	NA	78020476	78075322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.11	chr9	+	3004	11	ISM	ENSMUSG00000009828.16	ENSMUST00000117330.8	2698	12	-63	3476	-4	-3476	5prime_fragment	FALSE	canonical	3	95	junction_8	8.89100669215809	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCTGAGTTTCATTTTT	NA	False	NA	NA	False	NA	NA	NA	78020518	78069219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944
ES.35652.12	chr9	+	4988	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-78	1650	-4	4	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGTAATCTAGCCAG	NA	False	NA	NA	False	AATAAA	-17	NA	78020518	78077739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.13	chr9	+	6591	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-28	-3	3	3	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACTAGAATTTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	78020568	78079392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.14	chr9	+	2951	1	NIC	ENSMUSG00000009828.16	novel	735	2	NA	NA	4	-2231	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAACCTCTCCTACTTC	NA	False	NA	NA	False	NA	NA	NA	78020569	78023520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78020600_78023500
ES.35652.15	chr9	+	3119	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	-22	3463	-7	706	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGAGACAGCACAGTCCTA	NA	False	NA	NA	False	GATAAA	-15	NA	78020574	78075926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.18	chr9	+	3776	8	NIC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	10	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	38.6924028824306	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGTAATCTAGCCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	78020606	78077740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78071812_78071942_78074191_78074315_78074881
ES.35652.19	chr9	+	2374	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	17	4169	17	0	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78020613	78075220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.2	chr9	+	2453	1	Genic_Genomic	ENSMUSG00000009828.16	novel	NA	NA	NA	NA	-514	-2299	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAATAACAGACGTGATT	NA	False	NA	NA	False	TTTAAA	-32	NA	78015959	78018412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_78016000_78018400
ES.35652.21	chr9	+	2238	13	NIC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	30.9931668096193	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78020616	78075220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.22	chr9	+	2424	15	NNC	ENSMUSG00000009828.16	novel	6560	14	NA	NA	90	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.4294125169089	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCGGGTCTCATTATT	NA	False	NA	2	True	TATAAA	-13	NA	78020686	78075219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78063291_78063416_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.23	chr9	+	3284	6	ISM	ENSMUSG00000009828.16	ENSMUST00000142402.2	3952	7	281	2511	281	4	3prime_fragment	FALSE	canonical	2	83	junction_4	11.7711511756497	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78062885	78075224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.24	chr9	+	612	1	NIC	ENSMUSG00000009828.16	novel	2540	14	NA	NA	12004	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78074608	78075220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78074600_78075200
ES.35652.4	chr9	+	2739	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	-31	-168	-31	168	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTATTGTGACAGGGT	NA	False	NA	NA	False	NA	NA	NA	78016442	78075388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.5	chr9	+	6737	14	NNC	ENSMUSG00000009828.16	novel	2540	14	NA	NA	-19	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.3195074821526	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTAGAATTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	78016454	78079394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78016764_78038576_78038858_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.6	chr9	+	5042	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	14	-2516	14	1	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCTCTGTAATCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	78016487	78077736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.7	chr9	+	2525	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	15	0	15	0	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78016488	78075220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35652.8	chr9	+	3061	11	ISM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	15	6000	15	-3475	5prime_fragment	FALSE	canonical	3	4	junction_1	33.0310460022083	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGAGTTTCATTTTTT	NA	False	NA	NA	False	NA	NA	NA	78016488	78069220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944
ES.35652.9	chr9	+	4141	13	NIC	ENSMUSG00000009828.16	novel	2540	14	NA	NA	15	4	intron_retention	FALSE	canonical	2	4	junction_1	30.1389144905165	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTCATTATTTTCTT	NA	False	NA	7	True	TATAAA	-18	NA	78016488	78075224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ES.35653.1	chr9	-	2757	12	NNC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	24.4438976481126	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	3	True	AATAAA	-31	NA	78015872	77988780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78010769_78011637_78015572
ES.35653.11	chr9	-	1261	6	FSM	ENSMUSG00000001366.15	ENSMUST00000159099.8	1201	6	-57	-3	-5	3	multi-exon	FALSE	non_canonical	2	34	junction_4	15.3961034031342	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCATATTGATTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	78015943	78002791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ES.35653.2	chr9	-	3226	7	NNC	ENSMUSG00000001366.15	novel	1850	13	NA	NA	-2094	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	22.5511763674438	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	False	NA	0	True	AATAAA	-28	NA	77997012	77988783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77995577_77995631
ES.35653.3	chr9	-	2142	13	FSM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	10	3	10	0	multi-exon	FALSE	non_canonical	2	34	junction_11	11.6437274482396	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	False	NA	0	True	AATAAA	-28	NA	78015928	77988783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ES.35653.5	chr9	-	2001	12	NIC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_11	19.5448202856921	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	False	NA	0	True	AATAAA	-28	NA	78015871	77988783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78015572
ES.35653.6	chr9	-	1229	7	NNC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-3128	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	19.2563120964414	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGTGTGGATGGCCT	NA	False	NA	-1	True	AATAAA	-27	NA	77998046	77988784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_77997955
ES.35653.7	chr9	-	2853	10	NIC	ENSMUSG00000001366.15	novel	1850	13	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	23.2283351869125	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGTGTGGATGGCCT	NA	False	NA	-1	True	AATAAA	-27	NA	78016345	77988784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_77989371_77991784_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
ES.35653.8	chr9	-	2547	13	NNC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	18.9581043942221	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATATGTGTGGATGGCC	NA	False	NA	-2	True	AATAAA	-26	NA	78016337	77988785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008963_78011548_78011637_78015572
ES.35653.9	chr9	-	3350	12	NIC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	2	34	junction_10	12.1226514296976	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATATGTGTGGATGG	NA	False	NA	-4	True	AATAAA	-24	NA	78015888	77988787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_77989371_77991784_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ES.35654.1	chr9	-	2140	14	Antisense	novelGene_ENSMUSG00000009828.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	78074963	78020590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78020737_78038574_78038854_78042877_78042931_78047255_78047378_78048473_78048555_78057809_78057948_78060850_78061017_78062628_78062797_78064920_78065234_78067648_78067836_78067940_78068091_78071810_78071936_78074184_78074314_78074880
ES.35654.2	chr9	-	174	1	Intergenic	novelGene_29038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGTAAACAACCTT	NA	False	NA	NA	False	NA	NA	NA	78026106	78025932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78025900_78026100
ES.35655.1	chr9	-	1689	1	Antisense	novelGene_ENSMUSG00000009828.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCTCACCA	NA	False	NA	NA	False	NA	NA	NA	78077802	78076113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78076100_78077800
ES.35656.1	chr9	-	330	1	FSM	ENSMUSG00002076161.1	ENSMUST00020183253.1	331	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTCCTGCAATTTAAT	NA	False	NA	-1	True	NA	NA	NA	78082914	78082584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78082600_78082900
ES.35657.1	chr9	+	1555	4	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	-10	2	intron_retention	FALSE	canonical	3	3	junction_1	4.49691252107735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083185	78086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78083417_78083852_78084025_78084280_78084376_78085106
ES.35657.2	chr9	+	1451	4	FSM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	-9	2	-9	-2	multi-exon	FALSE	canonical	3	12	junction_1	0.471404520791032	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGCCTTGGGATTTCTT	NA	False	NA	1	True	AATAAA	-12	NA	78083186	78086159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78083318_78083852_78084025_78084280_78084376_78085106
ES.35657.3	chr9	+	2977	1	Genic_Genomic	ENSMUSG00000097574.3	novel	NA	NA	NA	NA	-9	2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083186	78086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_78083200_78086200
ES.35657.4	chr9	+	1534	4	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_2	5.65685424949238	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATAGCCTTGGGATTT	NA	False	NA	-2	True	AATAAA	-9	NA	78083186	78086156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78083318_78083852_78084025_78084194_78084376_78085106
ES.35657.5	chr9	+	2156	3	ISM	ENSMUSG00000097574.3	ENSMUST00000180974.2	1444	4	14	5	14	-5	intron_retention	FALSE	canonical	3	12	junction_1	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACATAGCCTTGGGATTT	NA	False	NA	-2	True	AATAAA	-9	NA	78083209	78086156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78083318_78083852_78084025_78084280
ES.35657.6	chr9	+	1416	4	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	24	2	intron_retention	FALSE	canonical	1	2	junction_2	4.71404520791032	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083219	78086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78083318_78083852_78084019_78084280_78084376_78085106
ES.35657.7	chr9	+	2211	2	NIC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	26	2	intron_retention	FALSE	canonical	3	12	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083221	78086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78084376_78085106
ES.35657.8	chr9	+	1926	3	NIC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	34	-19	intron_retention	FALSE	canonical	3	12	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGTAATGAAGACA	NA	False	NA	-16	True	NA	NA	NA	78083229	78086142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78084025_78084280_78084376_78085106
ES.35657.9	chr9	+	2498	2	NNC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	34	2	intron_retention	FALSE	canonical	3	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGGATTTCTTTTTT	NA	False	NA	5	True	AATAAA	-16	NA	78083229	78086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78083417_78083852
ES.35658.1	chr9	-	473	2	Antisense	novelGene_ENSMUSG00000032348.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAGGGAGTGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	78097806	78097214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78097320_78097438
ES.35659.1	chr9	+	1183	8	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	-977	11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1167.12795933839	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTTTGTTTTGTTTTC	NA	False	NA	28	True	ATTAAA	-27	NA	78098251	78116642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78098291_78099072_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ES.35659.12	chr9	+	2025	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	71	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1184.29722479902	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	False	NA	10	True	ATTAAA	-9	NA	78099299	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78112773_78113193_78113336_78115082_78115215_78116338
ES.35659.13	chr9	+	996	6	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	6180	6	6180	-6	3prime_fragment	FALSE	canonical	3	2950	junction_4	256.764795094655	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTCTCGTTGGAGAG	NA	False	NA	11	True	ATTAAA	-10	NA	78105408	78116625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ES.35659.14	chr9	+	3000	1	NIC	ENSMUSG00000032348.7	novel	743	6	NA	NA	10262	-747	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAATGAAAG	254	False	NA	NA	False	NA	NA	NA	78109490	78112490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78109500_78112500
ES.35659.15	chr9	+	4425	2	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	11847	-7	intron_retention	FALSE	canonical	3	3356	junction_1	0	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	1839	False	NA	10	True	ATTAAA	-9	NA	78111075	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78115215_78116338
ES.35659.16	chr9	+	1910	3	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	12191	8	12191	-8	intron_retention	FALSE	canonical	3	2950	junction_2	400.5	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATTCTCGTTGGAG	2183	False	NA	9	True	ATTAAA	-8	NA	78111419	78116623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78111647_78113193_78113336_78115082
ES.35659.2	chr9	+	3588	5	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	46	-3	intron_retention	FALSE	canonical	3	2717	junction_1	267.895851964901	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCGTTGGAGAGGTG	NA	False	NA	14	True	ATTAAA	-13	NA	78099274	78116628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78106824_78111513_78113336_78115082_78115215_78116338
ES.35659.3	chr9	+	7163	5	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	49	-2	intron_retention	FALSE	canonical	3	2717	junction_1	250.518836617129	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCGTTGGAGAGGTGT	NA	False	NA	15	True	ATTAAA	-14	NA	78099277	78116629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78105659_78106771_78113336_78115082_78115215_78116338
ES.35659.5	chr9	+	6714	5	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	64	-2	intron_retention	FALSE	canonical	3	2717	junction_1	394.828127164213	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCGTTGGAGAGGTGT	NA	False	NA	15	True	ATTAAA	-14	NA	78099292	78116629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78111647_78113193_78113336_78115082_78115215_78116338
ES.35659.6	chr9	+	850	6	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	68	-7	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	1317.60683058339	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	False	NA	10	True	ATTAAA	-9	NA	78099296	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78105659_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ES.35659.7	chr9	+	892	7	NNC	ENSMUSG00000032348.7	novel	977	7	NA	NA	68	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1243.85757491228	384	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	False	NA	10	True	ATTAAA	-9	NA	78099296	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78099347_78105551_78105649_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ES.35659.8	chr9	+	2649	6	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	68	-7	intron_retention	FALSE	canonical	3	2717	junction_1	331.174032798467	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	False	NA	10	True	ATTAAA	-9	NA	78099296	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78115215_78116338
ES.35659.9	chr9	+	5592	6	NIC	ENSMUSG00000032348.7	novel	977	7	NA	NA	68	-7	intron_retention	FALSE	canonical	3	2717	junction_1	353.722263930333	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	False	NA	10	True	ATTAAA	-9	NA	78099296	78116624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78099347_78105551_78105659_78106771_78111647_78113193_78113336_78115082_78115215_78116338
ES.3566.1	chr10	-	1586	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	24	2	-13	-2	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTTTTATTTTTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	90959897	90952437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ES.3566.10	chr10	-	1455	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	-56	213	-56	4	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGTTTGTTATTTTAAA	NA	False	NA	0	True	AATAAA	-20	NA	90959977	90952648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ES.3566.12	chr10	-	2911	7	NIC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGAGTTTGTTATTTT	NA	False	NA	-3	True	AATAAA	-17	NA	90959922	90952651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
ES.3566.13	chr10	-	3579	7	NIC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-5	1	intron_retention	FALSE	canonical	1	1248	junction_6	1086.21145884829	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGAGTTTGTTATTTT	NA	False	NA	-3	True	AATAAA	-17	NA	90959889	90952651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90957906_90959419_90959569_90959777
ES.3566.14	chr10	-	5163	5	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-7	0	intron_retention	FALSE	canonical	1	1248	junction_4	1127.40332179748	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959872	90952652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90953186_90953905_90954079_90954560_90954743_90955388_90959569_90959777
ES.3566.15	chr10	-	6294	4	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1248	junction_3	1433.85757854661	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959889	90952652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90954743_90955388_90959569_90959777
ES.3566.18	chr10	-	1157	7	NIC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	1	53	junction_5	1651.45929576104	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959806	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90959419_90959569_90959777
ES.3566.23	chr10	-	4053	5	NNC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_4	1832.44808930567	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959867	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90954743_90955388_90955569_90957783_90959566_90959777
ES.3566.28	chr10	-	4287	4	NIC	ENSMUSG00000061904.13	novel	1483	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	3880	junction_2	289.721705549768	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959889	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90954743_90955388_90955569_90957783
ES.3566.29	chr10	-	3845	7	NNC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	1898.63682824166	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959868	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90958194_90959419_90959566_90959773
ES.3566.30	chr10	-	1099	5	NIC	ENSMUSG00000061904.13	novel	1483	7	NA	NA	270	0	intron_retention	FALSE	canonical	3	3785	junction_2	122.696780723864	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90957815	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783
ES.3566.32	chr10	-	1346	8	FSM	ENSMUSG00000061904.13	ENSMUST00000170810.8	1341	8	-5	0	-5	0	multi-exon	FALSE	canonical	1	85	junction_6	1787.71823557179	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959870	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90958068_90958194_90959419_90959569_90959777
ES.3566.37	chr10	-	1369	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1601.27180320991	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959889	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957913_90959419_90959569_90959777
ES.3566.39	chr10	-	2694	8	NNC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_5	1820.62178210341	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959868	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955567_90957779_90957906_90958068_90959569_90959777
ES.3566.4	chr10	-	2067	9	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_7	1952.08023256602	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTAGTTTTATTTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	90959887	90952439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90958068_90958194_90959098_90959258_90959419
ES.3566.42	chr10	-	1292	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1449.17098046167	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959867	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959825
ES.3566.44	chr10	-	6915	3	NIC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1248	junction_2	1665	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959865	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90959569_90959777
ES.3566.46	chr10	-	4130	7	NNC	ENSMUSG00000061904.13	novel	1341	8	NA	NA	-11	0	intron_retention	FALSE	canonical	1	21	junction_5	1660.68647954192	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959932	90952653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90956572_90959569_90959777
ES.3566.47	chr10	-	1363	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1601.27180320991	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTATGAGTTTGTTAT	NA	False	NA	-6	True	AATAAA	-14	NA	90959898	90952654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957899_90959419_90959569_90959777
ES.3566.48	chr10	-	1322	8	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1612.18023249289	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTATGAGTTTGTTAT	NA	False	NA	-6	True	AATAAA	-14	NA	90959855	90952654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955560_90957779_90957906_90959419_90959569_90959777
ES.3566.5	chr10	-	4777	5	FSM	ENSMUSG00000061904.13	ENSMUST00000167455.8	891	5	-3453	-433	665	-4	multi-exon	FALSE	canonical	3	3785	junction_3	317.741246929007	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTAGTTTTATTTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	90959152	90952439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388
ES.3566.53	chr10	-	5070	6	NNC	ENSMUSG00000061904.13	novel	1483	7	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	2028.38511136322	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTATGAGTTTGTTAT	NA	False	NA	-6	True	AATAAA	-14	NA	90959867	90952654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954556_90954743_90955388_90959563_90959773
ES.3566.55	chr10	-	5549	5	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1248	junction_4	1273.22354184173	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTATGAGTTTGTTA	NA	False	NA	-7	True	AATAAA	-13	NA	90959867	90952655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954743_90955388_90959569_90959777
ES.3566.56	chr10	-	5787	5	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	1248	junction_4	1264.36177081562	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTATGAGTTTGTTA	NA	False	NA	-7	True	AATAAA	-13	NA	90959867	90952655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90954079_90954560_90954743_90955388_90959569_90959777
ES.3566.57	chr10	-	1397	8	FSM	ENSMUSG00000061904.13	ENSMUST00000163246.8	1395	8	-5	3	-5	-2	multi-exon	FALSE	canonical	0	0	junction_5	1829.96665521087	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTATGAGTTTGTTA	NA	False	NA	-7	True	AATAAA	-13	NA	90959824	90952655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957969_90958194_90959419_90959569_90959777
ES.3566.60	chr10	-	2451	2	FSM	ENSMUSG00000061904.13	ENSMUST00000172442.2	4039	2	-5	1593	-5	-1593	multi-exon	FALSE	canonical	1	1248	junction_1	0	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATAGATGATTGTGAG	NA	False	NA	NA	False	NA	NA	NA	90959889	90957229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90959569_90959777
ES.3566.7	chr10	-	3066	7	NIC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	0	-4	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTAGTTTTATTTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	90959865	90952439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
ES.3566.8	chr10	-	6412	3	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	-2	52	intron_retention	FALSE	canonical	1	1248	junction_2	1316	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAGAATAATTAA	NA	False	NA	48	True	AAAAAG	-11	NA	90959867	90952600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90954743_90955388_90959569_90959777
ES.3566.9	chr10	-	5128	6	NIC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	4	8	intron_retention	FALSE	canonical	1	1248	junction_5	1149.29219957329	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGTTATTTTAAAAACT	NA	False	NA	4	True	AATAAA	-24	NA	90959917	90952644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90959569_90959777
ES.35660.1	chr9	+	866	6	ISM	ENSMUSG00000074183.4	ENSMUST00000098537.4	875	7	1494	2	1494	-2	3prime_fragment	FALSE	canonical	1	1	junction_4	9.65401470891774	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTCCTCATAAGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	78139431	78149964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78139609_78142365_78142418_78143211_78143345_78146766_78146909_78148808_78148941_78149734
ES.35661.1	chr9	+	323	2	NNC	ENSMUSG00000110919.2	novel	348	3	NA	NA	334	499	at_least_one_novel_splicesite	FALSE	canonical	3	3031	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTTCCCGGTGTCCGT	NA	False	NA	NA	False	ATTAAA	-36	NA	78153165	78153916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78153212_78153639
ES.35662.1	chr9	+	239	1	Intergenic	novelGene_29039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCGTCGTCATTAA	4144	False	NA	NA	False	AATAAA	-20	NA	78180085	78180324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78180100_78180300
ES.35663.1	chr9	-	4441	1	Intergenic	novelGene_29040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	78194528	78190087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78190100_78194500
ES.35664.1	chr9	-	202	1	Intergenic	novelGene_29041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAACAAAAA	247	False	NA	NA	False	NA	NA	NA	78209047	78208845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78208800_78209000
ES.35665.1	chr9	+	175	2	Antisense	novelGene_ENSMUSG00000090802.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAATTGTG	9689	False	NA	NA	False	NA	NA	NA	78218976	78231073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78218995_78230916
ES.35665.2	chr9	+	177	1	Intergenic	novelGene_29042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAATTGTG	211	False	NA	NA	False	NA	NA	NA	78230896	78231073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78230900_78231100
ES.35666.1	chr9	+	179	1	Intergenic	novelGene_29043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	78242090	78242269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78242100_78242300
ES.35667.1	chr9	-	840	6	NNC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-1937	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.8280677584532	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATATGCTCCTCATAAG	NA	False	NA	-4	True	AATAAA	-12	NA	78247971	78238304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78247817
ES.35667.2	chr9	-	864	7	NIC	ENSMUSG00000057933.11	novel	870	7	NA	NA	-3823	-25	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	12.0369800568452	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAATTAACAAC	NA	False	NA	-24	True	TATAAA	-29	NA	78249857	78238324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78249768
ES.35668.1	chr9	-	221	1	Intergenic	novelGene_29044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGCAGCCATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	78257990	78257769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78257800_78258000
ES.35669.1	chr9	-	172	1	Intergenic	novelGene_29045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	78258868	78258696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78258700_78258900
ES.3567.1	chr10	-	217	1	Intergenic	novelGene_2726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGGTTATCTATCTGT	NA	False	NA	NA	False	NA	NA	NA	90964519	90964302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_90964300_90964500
ES.35670.1	chr9	-	200	1	Intergenic	novelGene_29046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCCCATTTGATTCTC	NA	False	NA	NA	False	NA	NA	NA	78259740	78259540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78259500_78259700
ES.35671.1	chr9	+	174	1	Intergenic	novelGene_29047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTCGAGACAGGG	NA	False	NA	6	True	NA	NA	NA	78279006	78279180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78279000_78279200
ES.35672.1	chr9	+	136	1	Antisense	novelGene_ENSMUSG00000032346.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	78284390	78284526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78284400_78284500
ES.35673.1	chr9	-	807	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	21	-209	21	209	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTCAGTTTACCCTAA	NA	False	NA	NA	False	NA	NA	NA	78275438	78274124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78274577_78275002_78275186_78275266
ES.35673.11	chr9	-	3088	7	Fusion	ENSMUSG00000032346.8_ENSMUSG00000060461.6	novel	619	3	NA	NA	332	0	multi-exon	FALSE	non_canonical	0	0	junction_3	84260.8982578647	11435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78285675	78274333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_78274577_78275002_78275186_78275266_78275987_78280906_78280981_78283328_78284974_78285256_78285440_78285635
ES.35673.13	chr9	-	974	2	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	32	-4	intron_retention	FALSE	canonical	3	7420	junction_1	0	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCGTCGTCATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	78275427	78274337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78275151_78275266
ES.35673.15	chr9	-	584	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCGTCGTCATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	78275439	78274337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274574_78275010_78275186_78275266
ES.35673.16	chr9	-	600	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90659	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGCGTCGTCATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	78275438	78274337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78274996_78275186_78275266
ES.35673.2	chr9	-	9676	5	Fusion	ENSMUSG00000032346.8_ENSMUSG00000060461.6	novel	619	3	NA	NA	591	42	multi-exon	FALSE	non_canonical	0	0	junction_3	89352.8361032122	11435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGTGTCCGTTTGAATCC	NA	False	NA	NA	False	ATTAAA	-44	NA	78285416	78274291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_78274577_78275002_78275186_78275266_78278513_78279171_78284974_78285256
ES.35673.21	chr9	-	544	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	22	-30	at_least_one_novel_splicesite	FALSE	canonical	2	8289	junction_1	86514.5	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275437	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78275025_78275186_78275266
ES.35673.22	chr9	-	494	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	10	-30	at_least_one_novel_splicesite	FALSE	canonical	3	664	junction_2	88746.5	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275449	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78275002_78275178_78275343
ES.35673.23	chr9	-	561	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	20	-30	at_least_one_novel_splicesite	FALSE	canonical	3	2030	junction_2	88063.5	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275439	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78275002_78275178_78275266
ES.35673.24	chr9	-	612	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	21	-30	at_least_one_novel_splicesite	FALSE	canonical	3	2030	junction_3	2399.09001266916	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275438	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78274796_78274849_78275002_78275178_78275266
ES.35673.27	chr9	-	608	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	21	-30	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	83712.1200557137	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275438	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78274808_78274849_78275002_78275186_78275266
ES.35673.3	chr9	-	1069	2	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	18	42	intron_retention	FALSE	canonical	3	181318	junction_1	0	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGTGTCCGTTTGAATCC	NA	False	NA	NA	False	ATTAAA	-44	NA	78275441	78274291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78275186_78275266
ES.35673.30	chr9	-	595	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	26	-30	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	3241.42283573125	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAAATTGAA	NA	False	NA	NA	False	NA	NA	NA	78275433	78274363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78274808_78274849_78275002_78275178_78275266
ES.35673.35	chr9	-	2024	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	144	-30	144	30	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAAGGGTGGTTTTGC	NA	False	NA	NA	False	GATAAA	-19	NA	78285863	78283360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78284974_78285256_78285440_78285635
ES.35673.36	chr9	-	1308	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	36	794	36	-794	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCTACCCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	78285971	78284184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78284974_78285256_78285440_78285635
ES.35673.37	chr9	-	1130	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	73	935	73	-935	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTGTCCTTCCTTAT	NA	False	NA	-1	True	ATTAAA	-14	NA	78285934	78284325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78284974_78285256_78285440_78285635
ES.35673.4	chr9	-	702	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	10	41	at_least_one_novel_splicesite	FALSE	canonical	3	3484	junction_1	82858.6360227801	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGTGTCCGTTTGAATC	NA	False	NA	NA	False	ATTAAA	-43	NA	78275449	78274292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78274796_78274849_78275002_78275186_78275266
ES.35673.40	chr9	-	745	4	NNC	ENSMUSG00000032346.8	novel	2138	3	NA	NA	-75	-1305	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	952.33059152563	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTGAGTATTCAGTT	NA	False	NA	25	True	AGTAAA	-7	NA	78286082	78284695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78284974_78285256_78285440_78285635_78285812_78285974
ES.35673.7	chr9	-	1161	1	Genic_Genomic	ENSMUSG00000060461.6	novel	NA	NA	NA	NA	5	40	mono-exon	FALSE	NA	NA	NA	NA	NA	11198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTCCGTTTGAAT	NA	False	NA	NA	False	ATTAAA	-42	NA	78275454	78274293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_78274300_78275500
ES.35673.8	chr9	-	599	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	19	34	at_least_one_novel_splicesite	FALSE	canonical	3	7420	junction_2	85368.5	11198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTTCCCGGTGTCCGT	NA	False	NA	NA	False	ATTAAA	-36	NA	78275440	78274299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78274577_78275002_78275151_78275266
ES.35674.1	chr9	-	178	1	Intergenic	novelGene_29048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	78297927	78297749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78297700_78297900
ES.35675.1	chr9	+	2105	16	NNC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.5284420328755	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGTTGAAATTTTTT	9050	False	NA	1	True	AATAAA	-12	NA	78303066	78330868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318878_78319031_78319480_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.10	chr9	+	2026	16	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	26.8444076526606	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9084	False	NA	2	True	AATAAA	-13	NA	78303100	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78327870_78327959_78328979_78329121_78330733
ES.35675.12	chr9	+	6655	12	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	45	2	intron_retention	FALSE	canonical	3	37	junction_3	18.0091803953538	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTGAAATTTTTTATG	9087	False	NA	4	True	AATAAA	-15	NA	78303103	78330871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.13	chr9	+	3312	13	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	45	0	intron_retention	FALSE	canonical	0	0	junction_11	27.0630693422276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9087	False	NA	2	True	AATAAA	-13	NA	78303103	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78328979_78329121_78330733
ES.35675.14	chr9	+	3729	13	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	55	0	intron_retention	FALSE	canonical	3	37	junction_4	19.355590636529	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9097	False	NA	2	True	AATAAA	-13	NA	78303113	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.15	chr9	+	2879	12	NNC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	62	-1	intron_retention	FALSE	canonical	0	0	junction_9	37.1639210094063	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGTTGAAATTTTTT	9104	False	NA	1	True	AATAAA	-12	NA	78303120	78330868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78320247_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78328018_78328177_78328979_78329121_78330733
ES.35675.16	chr9	+	3382	14	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	63	0	intron_retention	FALSE	canonical	3	37	junction_4	19.1295799327211	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9105	False	NA	2	True	AATAAA	-13	NA	78303121	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.17	chr9	+	857	6	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	63	-10449	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	39.1744814898679	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTGTGTGTGGTT	9105	False	NA	NA	False	TTTAAA	-3	NA	78303121	78320420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78320247
ES.35675.18	chr9	+	4139	12	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	89	0	intron_retention	FALSE	canonical	3	37	junction_4	17.5555788029742	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9131	False	NA	2	True	AATAAA	-13	NA	78303147	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.19	chr9	+	1902	15	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	103	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	25.0262107497279	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGTTGAAATTTTTT	9145	False	NA	1	True	AATAAA	-12	NA	78303161	78330868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.2	chr9	+	1970	15	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	26.467538839962	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9055	False	NA	2	True	AATAAA	-13	NA	78303071	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.20	chr9	+	5944	12	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	178	0	intron_retention	FALSE	canonical	3	37	junction_4	20.0898806812067	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9220	False	NA	2	True	AATAAA	-13	NA	78303236	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.21	chr9	+	156	1	Intergenic	novelGene_29051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	78305918	78306074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78305900_78306100
ES.35675.22	chr9	+	163	1	Intergenic	novelGene_29052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATATAATTAA	NA	False	NA	NA	False	NA	NA	NA	78322253	78322416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78322300_78322400
ES.35675.23	chr9	+	171	1	Intergenic	novelGene_29053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAAAATGG	1806	False	NA	NA	False	NA	NA	NA	78329918	78330089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78329900_78330100
ES.35675.3	chr9	+	2111	16	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	19.8422668955832	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9056	False	NA	2	True	AATAAA	-13	NA	78303072	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.4	chr9	+	2197	17	FSM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	20	-10	20	10	multi-exon	FALSE	canonical	3	26	junction_4	22.7904002542737	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTTATGGATATTAG	9062	False	NA	12	True	AATAAA	-23	NA	78303078	78330879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.5	chr9	+	4008	3	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	31	-20646	intron_retention	FALSE	canonical	3	88	junction_2	3.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGAGTTGTTTTTTTT	9073	False	NA	NA	False	NA	NA	NA	78303089	78310223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78306379_78308130_78308258_78309631
ES.35675.6	chr9	+	2747	15	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	32	0	intron_retention	FALSE	canonical	3	37	junction_4	19.3260160912482	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9074	False	NA	2	True	AATAAA	-13	NA	78303090	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.7	chr9	+	1952	15	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_12	25.0954301067923	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9076	False	NA	2	True	AATAAA	-13	NA	78303092	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78327870_78327959_78328979_78329121_78330733
ES.35675.8	chr9	+	2535	15	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	34	0	intron_retention	FALSE	canonical	3	37	junction_4	19.1179208586913	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9076	False	NA	2	True	AATAAA	-13	NA	78303092	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35675.9	chr9	+	3848	13	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	41	0	intron_retention	FALSE	canonical	3	37	junction_4	17.6704005488148	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9083	False	NA	2	True	AATAAA	-13	NA	78303099	78330869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ES.35676.10	chr9	+	2901	11	NNC	ENSMUSG00000032342.14	novel	2076	11	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	36.781653035175	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATACTGTTGTTAGGTG	NA	False	NA	11	True	AATAAA	-10	NA	78355492	78381426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78369510_78371876_78372285_78377912_78378074_78381071
ES.35676.11	chr9	+	2362	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	29.2266718445231	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	NA	False	NA	12	True	AATAAA	-11	NA	78355493	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368974_78372165_78372285_78377916_78378074_78381071
ES.35676.12	chr9	+	2153	8	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1	-9109	intron_retention	FALSE	canonical	3	15	junction_7	24.1981615088453	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAAAAAGTTAATTCC	NA	False	NA	NA	False	ATTAAA	-13	NA	78355493	78368914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103
ES.35676.13	chr9	+	2253	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.8306661906417	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATACTGTTGTTAGGT	NA	False	NA	10	True	AATAAA	-9	NA	78355500	78381425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368877_78372161_78372285_78377912_78378074_78381071
ES.35676.14	chr9	+	1531	8	NNC	ENSMUSG00000032342.14	novel	2076	11	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.3651506083464	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	NA	False	NA	12	True	AATAAA	-11	NA	78355506	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78368103_78368320_78368801_78368877_78372165_78372285_78377912_78378074_78381071
ES.35676.16	chr9	+	3254	11	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	26	0	intron_retention	FALSE	canonical	3	15	junction_6	22.4412566493055	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355520	78381434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ES.35676.17	chr9	+	3563	13	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	77	985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.4760711581918	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAACAAATTGGCTTTTT	NA	False	NA	NA	False	TTTAAA	-11	NA	78355571	78383615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360048_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071_78381179_78382077
ES.35676.18	chr9	+	2185	4	NNC	ENSMUSG00000032342.14	novel	840	4	NA	NA	-1728	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.6526695123626	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	618	False	NA	12	True	AATAAA	-11	NA	78370252	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78371599_78371962_78372285_78377912_78378074_78381071
ES.35676.19	chr9	+	2744	1	NIC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1860	535	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGATTTGTCAAGCCAG	6180	False	NA	NA	False	NA	NA	NA	78375814	78378558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_78375800_78378600
ES.35676.2	chr9	+	2569	14	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-14	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.4472545860989	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAATACTGTTGTTAGG	NA	False	NA	9	True	AATAAA	-8	NA	78355475	78381424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368877_78372165_78372285_78374013_78374161_78376451_78376605_78377916_78378074_78381071
ES.35676.20	chr9	+	145	1	Intergenic	novelGene_29058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	78380353	78380498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78380400_78380500
ES.35676.21	chr9	+	172	2	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGCAGAGTTGACTGG	NA	False	NA	NA	False	NA	NA	NA	78383422	78418147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78383568_78418120
ES.35676.22	chr9	+	176	2	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	78383423	78424917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78383528_78424845
ES.35676.23	chr9	+	175	2	Antisense	novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	78383423	78397843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78383528_78397772
ES.35676.24	chr9	+	4999	1	Antisense	novelGene_ENSMUSG00000037742.15_AS_novelGene_ENSMUSG00000076138.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGAGTGCGGCCGGAGT	NA	False	NA	NA	False	NA	NA	NA	78383684	78388683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_78383700_78388700
ES.35676.25	chr9	+	326	1	Intergenic	novelGene_29061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAAATAGACC	1793	False	NA	NA	False	NA	NA	NA	78397667	78397993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78397700_78398000
ES.35676.26	chr9	+	224	1	Intergenic	novelGene_29060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTGCCTTTAATCCCA	1793	False	NA	NA	False	NA	NA	NA	78397667	78397891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78397700_78397900
ES.35676.27	chr9	+	169	1	Intergenic	novelGene_29062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGCAATTTCCA	5425	False	NA	NA	False	NA	NA	NA	78401299	78401468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78401300_78401500
ES.35676.28	chr9	+	212	1	Intergenic	novelGene_29065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGAAGTCAGCAGAG	NA	False	NA	NA	False	AATAAA	-9	NA	78412803	78413015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78412800_78413000
ES.35676.29	chr9	+	174	1	Intergenic	novelGene_29067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATATGTATTTT	NA	False	NA	NA	False	NA	NA	NA	78421742	78421916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78421700_78421900
ES.35676.3	chr9	+	2369	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	-10	7	-10	-7	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	NA	False	NA	12	True	AATAAA	-11	NA	78355479	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ES.35676.30	chr9	+	233	1	Intergenic	novelGene_29068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGATGGCTCTAGGGAGC	NA	False	NA	NA	False	NA	NA	NA	78424738	78424971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78424700_78425000
ES.35676.4	chr9	+	3572	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	-7	-1199	-7	3	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGATGGGATGTCTC	NA	False	NA	NA	False	AGTAAA	-22	NA	78355482	78382633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ES.35676.5	chr9	+	1834	8	ISM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	-2	12834	-2	-9423	5prime_fragment	FALSE	canonical	3	72	junction_7	6.04067843196171	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATAAGTCACTGTAGCT	NA	False	NA	NA	False	TATAAA	-21	NA	78355487	78368600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114
ES.35676.6	chr9	+	2247	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-1	513	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	24.5996035713539	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78355488	78378536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78378293
ES.35676.7	chr9	+	1983	11	NNC	ENSMUSG00000032342.14	novel	2076	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	34.4592512977284	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	NA	False	NA	12	True	AATAAA	-11	NA	78355489	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368877_78372165_78372285_78377912_78378074_78381071
ES.35676.8	chr9	+	4016	11	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_8	31.7680657264493	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355492	78381434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78370134_78372165_78372285_78377912_78378074_78381071
ES.35676.9	chr9	+	2752	11	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	15	junction_7	28.6419273094532	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGTTGTTAGGTGA	NA	False	NA	12	True	AATAAA	-11	NA	78355492	78381427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368877_78372165_78372285_78377912_78378074_78381071
ES.35677.1	chr9	+	4835	3	NNC	ENSMUSG00000111417.2	novel	961	2	NA	NA	189	6601	intron_retention	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTGTGTGTGTGTGATG	320	False	NA	NA	False	ATTAAA	-20	NA	78428016	78436040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_78429465_78429618_78429804_78432838
ES.35677.2	chr9	+	3948	1	Intergenic	novelGene_29069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCTAAATTACGTAGT	3010	False	NA	NA	False	ATTAAA	-6	NA	78432078	78436026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78432100_78436000
ES.35678.1	chr9	+	786	1	Intergenic	novelGene_29070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCACTTGTGTGAGTGC	7707	False	NA	NA	False	AATAAA	-14	NA	78436775	78437561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78436800_78437600
ES.35679.1	chr9	+	235	1	Intergenic	novelGene_29071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAAGTGAAACCATGCA	2808	False	NA	NA	False	CATAAA	-31	NA	78451018	78451253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78451000_78451300
ES.3568.1	chr10	+	138	1	Intergenic	novelGene_2727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90967855	90967993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_90967900_90968000
ES.35680.1	chr9	+	178	1	Intergenic	novelGene_29072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAGATTAAA	9941	False	NA	NA	False	NA	NA	NA	78458151	78458329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_78458200_78458300
ES.35681.1	chr9	-	195	1	Intergenic	novelGene_29049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAAGGGGGGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	78298136	78297941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78297900_78298100
ES.35681.10	chr9	-	164	1	Intergenic	novelGene_29055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTTTTTTAAATTTT	6066	False	NA	NA	False	NA	NA	NA	78341110	78340946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78340900_78341100
ES.35681.11	chr9	-	1987	5	Antisense	novelGene_ENSMUSG00000032342.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	10001	False	NA	NA	False	NA	NA	NA	78368553	78359230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78360334_78364489_78364604_78364696_78364886_78365195_78365325_78368101
ES.35681.12	chr9	-	2612	2	Antisense	novelGene_ENSMUSG00000032342.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACCAAAACCCTAAAA	10001	False	NA	NA	False	NA	NA	NA	78368553	78365732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78367170_78367378
ES.35681.13	chr9	-	1931	2	Antisense	novelGene_ENSMUSG00000032342.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGCTAGAGAACTGG	10001	False	NA	NA	False	NA	NA	NA	78368553	78366413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_78367170_78367378
ES.35681.14	chr9	-	176	1	Intergenic	novelGene_29056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTATAAAAGACCAGCAGA	9925	False	NA	NA	False	NA	NA	NA	78368757	78368581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78368600_78368800
ES.35681.15	chr9	-	224	1	Intergenic	novelGene_29057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAAATGGTTTAAGTAAA	3840	False	NA	NA	False	NA	NA	NA	78374842	78374618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78374600_78374800
ES.35681.16	chr9	-	1869	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	-77	2	-77	-2	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGGTCAATGCTGAAA	7023	False	NA	NA	False	ATTAAA	-20	NA	78389083	78385732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.17	chr9	-	2869	5	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	53	4	53	-4	intron_retention	FALSE	canonical	3	11573	junction_3	1660.48372093797	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTGGTCAATGCTGA	7153	False	NA	98	True	ATTAAA	-18	NA	78388953	78385734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133
ES.35681.18	chr9	-	1622	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5015.73746180103	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGTTGGTCAATGCT	7153	False	NA	96	True	ATTAAA	-16	NA	78388953	78385736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387717_78387919_78387971_78388920
ES.35681.2	chr9	-	176	2	Intergenic	novelGene_29050	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTACATTCTTT	5918	False	NA	NA	False	NA	NA	NA	78475819	78297960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78297971_78475653
ES.35681.22	chr9	-	1726	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4936.65241446311	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387141_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.24	chr9	-	2122	9	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	5997.17128632324	4043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	NA	False	NA	95	True	ATTAAA	-15	NA	78396443	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78395275_78395609_78396355
ES.35681.25	chr9	-	1822	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-258	-7	at_least_one_novel_splicesite	FALSE	canonical	3	435	junction_7	4804.61982611209	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7725	False	NA	95	True	ATTAAA	-15	NA	78388381	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388260
ES.35681.26	chr9	-	1774	8	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	5	-7	combination_of_known_junctions	FALSE	canonical	3	424	junction_7	4808.28362605321	4043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	NA	False	NA	95	True	ATTAAA	-15	NA	78396428	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78396355
ES.35681.28	chr9	-	1739	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	54	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4949.720940392	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7154	False	NA	95	True	ATTAAA	-15	NA	78388952	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388914
ES.35681.29	chr9	-	1669	9	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	4703.24903657036	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386603_78386667_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.3	chr9	-	161	1	Intergenic	novelGene_29054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGATAAAGCTGGT	9987	False	NA	NA	False	NA	NA	NA	78332603	78332442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78332400_78332600
ES.35681.30	chr9	-	1719	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	4936.02014351065	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387042_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.32	chr9	-	1727	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5026.41413952738	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386810_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.33	chr9	-	1506	6	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	89	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5465.14009335534	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	8414	False	NA	95	True	ATTAAA	-15	NA	78387692	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386566_78386817_78386905_78387057_78387133_78387431_78387522
ES.35681.35	chr9	-	1809	7	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	55	-7	intron_retention	FALSE	canonical	3	9075	junction_6	2285.92845834393	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7155	False	NA	95	True	ATTAAA	-15	NA	78388951	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.37	chr9	-	1789	6	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	1	-7	intron_retention	FALSE	canonical	3	12130	junction_5	1464.96888704163	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	8137	False	NA	95	True	ATTAAA	-15	NA	78387969	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386475_78386559_78387057_78387133_78387431_78387522_78387703_78387792
ES.35681.39	chr9	-	1819	7	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	intron_retention	FALSE	canonical	3	9075	junction_6	1931.40898482602	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.4	chr9	-	4208	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	-151	-8	-118	8	multi-exon	FALSE	canonical	1	6	junction_4	3.56195171219375	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATGTATCAGTCTTAG	5122	False	NA	0	True	AATAAA	-24	NA	78350637	78337799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
ES.35681.40	chr9	-	2834	1	FSM	ENSMUSG00000076138.3	ENSMUST00000102184.3	108	1	-2654	-72	-2654	72	mono-exon	FALSE	NA	NA	NA	NA	NA	4040	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7535	False	NA	95	True	ATTAAA	-15	NA	78388571	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78385700_78388600
ES.35681.41	chr9	-	1867	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-142	-7	at_least_one_novel_splicesite	FALSE	canonical	3	420	junction_7	4809.61598874418	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7841	False	NA	95	True	ATTAAA	-15	NA	78388265	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388099
ES.35681.44	chr9	-	1620	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4740.55454432866	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386353_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.45	chr9	-	1729	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	99	-7	at_least_one_novel_splicesite	FALSE	canonical	1	141	junction_7	4902.6408876716	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7199	False	NA	95	True	ATTAAA	-15	NA	78388907	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388879
ES.35681.46	chr9	-	1885	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-538	-7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	4948.05068193732	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	6562	False	NA	95	True	ATTAAA	-15	NA	78389544	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78389360
ES.35681.5	chr9	-	3747	4	NNC	ENSMUSG00000032344.18	novel	4049	5	NA	NA	13	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.09120616516523	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAATGTATCAGTCTTA	5253	False	NA	-1	True	AATAAA	-23	NA	78350506	78337800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78340550_78341594_78341616_78344588_78344805_78349745
ES.35681.50	chr9	-	1946	6	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	8	-7	intron_retention	FALSE	canonical	3	9075	junction_5	2485.88838043867	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7108	False	NA	95	True	ATTAAA	-15	NA	78388998	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387431_78387522_78387971_78388920
ES.35681.51	chr9	-	1837	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	1037	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4949.720940392	4043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	710	False	NA	95	True	ATTAAA	-15	NA	78395396	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78395260
ES.35681.52	chr9	-	1922	6	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-7	intron_retention	FALSE	canonical	3	9075	junction_5	2171.56877855618	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGTTGGTCAATGC	7153	False	NA	95	True	ATTAAA	-15	NA	78388953	78385737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386475_78386559_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.54	chr9	-	1730	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5015.73746180103	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTGTTGGTCAATG	7153	False	NA	94	True	ATTAAA	-14	NA	78388953	78385738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387696_78387788_78387971_78388920
ES.35681.55	chr9	-	753	3	Fusion	ENSMUSG00000076138.3_ENSMUSG00000037742.15	novel	1152	4	NA	NA	-365	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	6811.5	4040	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTGTTGGTCAATG	8743	False	NA	94	True	ATTAAA	-14	NA	78387363	78385738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_78386122_78386916_78387057_78387133
ES.35681.56	chr9	-	1936	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	84	-8	at_least_one_novel_splicesite	FALSE	canonical	3	408	junction_7	4813.61330615833	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTGTTGGTCAATG	7184	False	NA	94	True	ATTAAA	-14	NA	78388922	78385738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388686
ES.35681.57	chr9	-	1837	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	96	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4949.720940392	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	7196	False	NA	93	True	ATTAAA	-13	NA	78388910	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388772
ES.35681.58	chr9	-	1794	5	NIC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	71	-9	intron_retention	FALSE	canonical	3	12130	junction_4	1631.09049028556	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	8207	False	NA	93	True	ATTAAA	-13	NA	78387899	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78386141_78386239_78386475_78386559_78387431_78387522_78387703_78387792
ES.35681.59	chr9	-	1367	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	55	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4936.65241446311	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	7155	False	NA	93	True	ATTAAA	-13	NA	78388951	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78386931_78387370_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.6	chr9	-	5142	4	NIC	ENSMUSG00000032344.18	novel	4049	5	NA	NA	-8	7	intron_retention	FALSE	canonical	1	6	junction_3	3.68178700572909	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAATGTATCAGTCTTA	5232	False	NA	-1	True	AATAAA	-23	NA	78350527	78337800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78341698_78342722_78342966_78344584_78344805_78349745
ES.35681.60	chr9	-	1717	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5015.73746180103	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	7153	False	NA	93	True	ATTAAA	-13	NA	78388953	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387807_78387971_78388920
ES.35681.61	chr9	-	1724	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4949.720940392	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	7153	False	NA	93	True	ATTAAA	-13	NA	78388953	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388928
ES.35681.63	chr9	-	1663	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	53	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4949.720940392	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	7153	False	NA	93	True	ATTAAA	-13	NA	78388953	78385739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387902_78388920
ES.35681.64	chr9	-	878	3	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-14	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7704.5	4040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAATCTGTGTTGGTCA	9309	False	NA	91	True	ATTAAA	-11	NA	78386797	78385741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386481_78386559
ES.35681.68	chr9	-	1710	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	61	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6275.98032670789	4040	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAAATCTGTGTTGGT	7161	False	NA	89	True	ATTAAA	-9	NA	78388945	78385743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387423_78387520_78387703_78387796_78387971_78388920
ES.35681.69	chr9	-	1672	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	-2	124	-2	111	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	4039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGTGTGGCAGTTT	7098	False	NA	-22	True	NA	NA	NA	78389008	78385854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ES.35681.7	chr9	-	5136	4	NIC	ENSMUSG00000032344.18	novel	2511	5	NA	NA	8	6	intron_retention	FALSE	canonical	0	0	junction_2	4.49691252107735	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAATGTATCAGTCTT	5281	False	NA	-2	True	AATAAA	-22	NA	78350478	78337801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78341698_78342722_78343010_78344584_78344805_78349745
ES.35681.70	chr9	-	2890	3	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	61	141	61	94	intron_retention	FALSE	canonical	3	15409	junction_1	167.5	4038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTGGACCATTTTT	7161	False	NA	-39	True	NA	NA	NA	78388945	78385871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_78386141_78386239_78386475_78386559
ES.35681.71	chr9	-	1686	8	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	1037	92	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_7	4936.36041253563	4041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTGTGGACCATTT	710	False	NA	-41	True	AGTAAA	-45	NA	78395396	78385873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78395275
ES.35681.72	chr9	-	2228	2	ISM	ENSMUSG00000076138.3_ENSMUSG00000037742.15	ENSMUST00000126614.2	842	3	-224	-1072	-71	-65	intron_retention	FALSE	canonical	3	12542	junction_1	0	4036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGTTGTGGACCATT	7912	False	NA	-42	True	AGTAAA	-44	NA	78388194	78385874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_78387431_78387522
ES.35681.76	chr9	-	3624	2	NNC	ENSMUSG00000037742.15	novel	859	5	NA	NA	-9	-4875	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAATGAAAACA	NA	False	NA	NA	False	NA	NA	NA	78396442	78392071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78395609_78396355
ES.35681.77	chr9	-	1593	1	NIC	ENSMUSG00000037742.15	novel	859	5	NA	NA	17	-7627	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCTTGAATTGGCTC	NA	False	NA	NA	False	NA	NA	NA	78396416	78394823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78394800_78396400
ES.35681.78	chr9	-	133	1	Intergenic	novelGene_29059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	78397631	78397498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78397500_78397600
ES.35681.79	chr9	-	160	1	Intergenic	novelGene_29063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	78404788	78404628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78404600_78404800
ES.35681.80	chr9	-	163	1	Intergenic	novelGene_29064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAACTA	NA	False	NA	NA	False	NA	NA	NA	78407718	78407555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78407600_78407700
ES.35681.81	chr9	-	177	1	Intergenic	novelGene_29066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTTCTCC	NA	False	NA	NA	False	NA	NA	NA	78417331	78417154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78417200_78417300
ES.35681.82	chr9	-	2996	11	NNC	ENSMUSG00000049624.15	novel	3236	11	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.9014387744578	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGTGTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	78495336	78443769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484468_78485967_78485990_78495155
ES.35681.83	chr9	-	3240	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGTGTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	78495327	78443769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
ES.35681.84	chr9	-	2993	2	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	45936	-18	45936	0	3prime_fragment	FALSE	canonical	3	40	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGTGTTT	NA	False	NA	-1	True	ATTAAA	-19	NA	78449361	78443769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_78445582_78448180
ES.35681.85	chr9	-	5667	11	NNC	ENSMUSG00000049624.15	novel	3236	11	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	13.9014387744578	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTTTTATTTTAT	NA	False	NA	-19	True	ATTAAA	-1	NA	78495292	78443787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78445582_78448180_78448272_78460215_78462073_78463967_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
ES.35681.86	chr9	-	3074	10	NIC	ENSMUSG00000049624.15	novel	3236	11	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.7395422157589	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGTGTTTTTATTT	NA	False	NA	-22	True	TATAAA	-22	NA	78495314	78443790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_78445582_78448180_78448272_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482036_78484311_78484546_78485792_78485990_78495155
ES.35681.87	chr9	-	1926	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	14	1296	0	-1278	multi-exon	FALSE	canonical	3	37	junction_3	5.61782876207526	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	78495309	78445065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
ES.35681.88	chr9	-	175	1	Intergenic	novelGene_29073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTGATATAAC	NA	False	NA	NA	False	NA	NA	NA	78467932	78467757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78467800_78467900
ES.35681.89	chr9	-	2433	6	NNC	ENSMUSG00000049624.15	novel	1151	6	NA	NA	1	8263	intron_retention	TRUE	non_canonical	0	0	junction_1	21.4046723871215	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	78495308	78468588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_78468616_78469060_78469683_78477190_78478391_78484311_78484546_78485792_78485990_78495155
ES.35681.9	chr9	-	3788	5	FSM	ENSMUSG00000032344.18	ENSMUST00000127190.2	2511	5	-15	-1262	-15	-1	multi-exon	FALSE	canonical	0	0	junction_3	3.93700393700591	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTAGTTGAATGTAT	5577	False	NA	-9	True	AATAAA	-15	NA	78350182	78337808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78340550_78341594_78341698_78342722_78343010_78344584_78344805_78349745
ES.35681.90	chr9	-	181	1	Intergenic	novelGene_29074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATGAATTT	5917	False	NA	NA	False	NA	NA	NA	78475820	78475639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78475600_78475800
ES.35681.91	chr9	-	178	1	Intergenic	novelGene_29075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTTTAAAGTCAAAGG	4389	False	NA	NA	False	NA	NA	NA	78484764	78484586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78484600_78484800
ES.35682.1	chr9	-	162	1	Intergenic	novelGene_29076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAAATAAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	78509139	78508977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78509000_78509100
ES.35683.1	chr9	+	5647	33	FSM	ENSMUSG00000046186.9	ENSMUST00000093812.5	5860	33	220	-7	3	7	multi-exon	FALSE	canonical	0	0	junction_8	1.55623744974859	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTGCTCTTTAATT	2319	False	NA	NA	False	ATTAAA	-22	NA	78523047	78623542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_78523235_78524158_78524332_78541928_78541958_78543730_78543962_78549260_78549387_78561841_78561882_78564726_78564812_78567544_78567642_78568173_78568334_78568934_78569045_78571484_78571701_78572725_78572828_78572917_78572981_78574520_78574698_78576984_78577138_78579192_78579268_78579833_78579895_78587302_78587445_78588084_78588203_78592116_78592231_78596011_78596231_78596990_78597136_78598470_78598648_78603101_78603184_78605364_78605594_78607476_78607643_78610317_78610506_78610934_78611091_78612319_78612386_78614725_78614866_78617414_78617563_78619818_78619922_78622173
ES.35684.1	chr9	-	3340	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-76	-2063	-76	2063	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATCTTCACCAAGAATT	NA	False	NA	NA	False	NA	NA	NA	78729196	78725856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78725900_78729200
ES.35684.2	chr9	-	2744	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	259	-1802	259	1802	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTGGCTTTTGAAG	NA	False	NA	NA	False	TATAAA	-14	NA	78728861	78726117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78726100_78728900
ES.35684.3	chr9	-	2114	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-74	-839	-74	839	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTGTTCTGTGTCT	NA	False	NA	NA	False	TATAAA	-16	NA	78729194	78727080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78727100_78729200
ES.35684.4	chr9	-	1969	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-77	-691	-77	691	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTGTCGTGTGATGTT	NA	False	NA	NA	False	AATACA	-26	NA	78729197	78727228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78727200_78729200
ES.35684.5	chr9	-	1782	2	Genic_Genomic	ENSMUSG00000059422.6	novel	1201	1	NA	NA	-56	666	multi-exon	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTCGAATTAGAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	78729176	78727253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_78728419_78728559
ES.35684.6	chr9	-	1600	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-56	-343	-56	343	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATTGCGAGTCTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	78729176	78727576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78727600_78729200
ES.35684.7	chr9	-	1487	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-56	-230	-56	230	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACATTATCTCCCATG	NA	False	NA	NA	False	AGTAAA	-13	NA	78729176	78727689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78727700_78729200
ES.35684.8	chr9	-	1376	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-77	-98	-77	98	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGTGGTGCCTTCTTA	NA	False	NA	NA	False	AATAAA	-42	NA	78729197	78727821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_78727800_78729200
ES.35685.1	chr9	-	178	1	Intergenic	novelGene_29077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTTATTTA	NA	False	NA	NA	False	NA	NA	NA	78738572	78738394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_78738400_78738600
ES.35686.1	chr9	-	176	1	Intergenic	novelGene_29078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATTTTTTAATTAA	NA	False	NA	NA	False	NA	NA	NA	79060987	79060811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_79060800_79061000
ES.35687.1	chr9	-	131	1	Intergenic	novelGene_29079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	79363052	79362921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_79362900_79363100
ES.35688.1	chr9	-	5661	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	118	-5120	-50	5120	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTATCCTCGTTATCTC	NA	False	NA	NA	False	AATGAA	-44	NA	79667042	79657522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ES.35688.2	chr9	-	4866	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	152	-4359	-16	4359	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTGTTCAT	NA	False	NA	2	True	ATTAAA	-22	NA	79667008	79658283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ES.35688.3	chr9	-	7066	1	Genic_Genomic	ENSMUSG00000032330.8	novel	NA	NA	NA	NA	1184	4359	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTGTTCAT	NA	False	NA	2	True	ATTAAA	-22	NA	79665349	79658283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_79658300_79665300
ES.35688.4	chr9	-	556	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	102	1	-66	-1	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTCAGCAGTTGGC	NA	False	NA	-1	True	AATAAA	-15	NA	79667058	79662643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ES.35688.5	chr9	-	4333	1	NIC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-28	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667020	79662687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79662700_79667000
ES.35688.6	chr9	-	3295	2	FSM	ENSMUSG00000032330.8	ENSMUST00000215452.2	344	2	-50	-2901	-50	0	multi-exon	FALSE	canonical	3	5621	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667042	79662687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79665862_79666921
ES.35688.7	chr9	-	1167	3	NIC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-50	0	intron_retention	FALSE	canonical	3	5621	junction_2	538.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667042	79662687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79663644_79665771_79665862_79666921
ES.35689.1	chr9	+	170	1	Intergenic	novelGene_29080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGGCCTACTAAC	NA	False	NA	NA	False	NA	NA	NA	79668310	79668480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_79668300_79668500
ES.3569.1	chr10	-	155	1	Intergenic	novelGene_2728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	90969483	90969328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_90969300_90969500
ES.35690.1	chr9	-	4486	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	-135	-693	-58	693	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTTATTCTCAAGCCT	NA	False	NA	NA	False	AATAAA	-23	NA	79700847	79675531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.10	chr9	-	3502	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	98	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.33500333163	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTTTATGTGTCTT	NA	False	NA	-7	True	AATAAA	-16	NA	79700614	79676222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678702_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.11	chr9	-	4360	6	NIC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	97	0	intron_retention	FALSE	canonical	3	435	junction_2	21.6573313222105	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	False	NA	-9	True	AATAAA	-14	NA	79700615	79676224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79678762_79681374_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.12	chr9	-	3517	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	98	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCGTGCTGTTTATGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	79700614	79676225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678356_79678397_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.13	chr9	-	6971	5	NIC	ENSMUSG00000032328.13	novel	2662	6	NA	NA	98	-1	intron_retention	FALSE	canonical	3	435	junction_1	16.5604951616792	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCGTGCTGTTTATGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	79700614	79676225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.14	chr9	-	3122	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCGTGCTGTTTATGTGT	NA	False	NA	-10	True	AATAAA	-13	NA	79700613	79676225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678062_79678497_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.15	chr9	-	3609	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	80	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.33500333163	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCGTGCTGTTTATGTG	NA	False	NA	-11	True	AATAAA	-12	NA	79700632	79676226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678795_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.16	chr9	-	3551	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	96	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.274308899172	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCGTGCTGTTTATGTG	NA	False	NA	-11	True	AATAAA	-12	NA	79700616	79676226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678762_79681374_79681585_79682383_79682525_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.17	chr9	-	3511	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATCGTGCTGTTTATGT	NA	False	NA	-12	True	AATAAA	-11	NA	79700673	79676227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79677333_79677437_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.18	chr9	-	3480	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700613	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678102_79678171_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.2	chr9	-	2363	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	-7	634	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	165.595558179828	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGATGGTGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	79700796	79675590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79676749_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.21	chr9	-	3707	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	-55	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700844	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678336_79678409_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.22	chr9	-	3459	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700613	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79677897_79677987_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.23	chr9	-	3510	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	98	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700614	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678654_79678694_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.24	chr9	-	3487	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700782	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79677597_79677828_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.25	chr9	-	3474	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700613	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79676614_79676689_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.26	chr9	-	3606	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	100	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.33500333163	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700612	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678819_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.27	chr9	-	3500	7	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	167.712054824134	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	False	NA	-18	True	AATAAA	-5	NA	79700613	79676233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687881_79700255
ES.35690.28	chr9	-	1907	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	-103	1854	-26	1755	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTGTGTAAAGGCT	NA	False	NA	-1	True	AATAAA	-17	NA	79700815	79678078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.29	chr9	-	1201	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	98	2359	98	1250	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATCACCATTTAATTTT	NA	False	NA	NA	False	CATAAA	-24	NA	79700614	79678583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.3	chr9	-	3924	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	88	634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.341360389577	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGATGGTGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	79700624	79675590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79676976_79677175_79678762_79681374_79681518_79682396_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.4	chr9	-	5094	6	NIC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	634	intron_retention	FALSE	canonical	3	408	junction_2	29.1410363576864	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGATGGTGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	79700613	79675590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79678762_79681374_79681585_79682383_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.5	chr9	-	3818	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	-153	-7	-76	7	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTATGTGTCTTACTAA	NA	False	NA	-2	True	AATAAA	-21	NA	79700865	79676217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.6	chr9	-	3524	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTATGTGTCTTACTA	NA	False	NA	-3	True	AATAAA	-20	NA	79700613	79676218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79678365_79678405_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.7	chr9	-	7875	4	NIC	ENSMUSG00000032328.13	novel	2662	6	NA	NA	102	6	intron_retention	FALSE	canonical	3	444	junction_2	15.6418242755334	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTATGTGTCTTACTA	NA	False	NA	-3	True	AATAAA	-20	NA	79700610	79676218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.8	chr9	-	6174	6	FSM	ENSMUSG00000032328.13	ENSMUST00000153815.8	2662	6	99	-3611	99	2	multi-exon	FALSE	canonical	3	408	junction_1	22.8508205541945	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTTTATGTGTCTT	NA	False	NA	-7	True	AATAAA	-16	NA	79700613	79676222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35690.9	chr9	-	3346	8	NNC	ENSMUSG00000032328.13	novel	3658	7	NA	NA	99	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.804216950311	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTTTATGTGTCTT	NA	False	NA	-7	True	AATAAA	-16	NA	79700613	79676222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_79677993_79678207_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ES.35691.1	chr9	-	4455	6	NIC	ENSMUSG00000034898.18	novel	4640	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTTTGATTTATTTGTG	NA	False	NA	NA	False	AATAAA	-29	NA	79869356	79722332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_79723180_79725179_79727989_79760903_79761083_79767361_79767536_79805476_79805759_79869192
ES.35692.1	chr9	+	4605	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	-259	765	-259	17	multi-exon	FALSE	canonical	0	0	junction_3	105.987768279143	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTGAACTTGCATAATT	NA	False	NA	24	True	AATAAA	-35	NA	79973925	80051470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.10	chr9	+	4214	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-25	12	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	86.9113916584011	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	79974159	80051465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.100	chr9	+	2913	17	ISM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	161	11867	-35	-3486	5prime_fragment	FALSE	canonical	0	0	junction_3	113.358116162893	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACACAGTTTTCTGCTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	79974345	80040368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.101	chr9	+	3974	23	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	126.13859129892	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974349	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033420_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.102	chr9	+	3864	21	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	113.652045736098	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATGATTAATTTGATA	NA	False	NA	1	True	AATAAA	-12	NA	79974353	80051447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023826_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.103	chr9	+	3985	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.277036563996	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATTAATTTGATATT	NA	False	NA	3	True	AATAAA	-14	NA	79974375	80051449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023826_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.104	chr9	+	4294	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.898989016484	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	2	True	AATAAA	-13	NA	79974381	80051448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997193_79999548_79999695_80000818_80000924_80006167_80006331_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.105	chr9	+	4148	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	126.529746935273	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974381	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80001790_80001863_80010973_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.106	chr9	+	6065	19	FSM	ENSMUSG00000034252.15	ENSMUST00000164859.8	3853	19	140	-2352	14	1567	multi-exon	FALSE	canonical	2	8	junction_1	87.8421880419654	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGATTTGCGTTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	79974394	80053802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.108	chr9	+	3614	20	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	137	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	116.423574732365	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974517	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.109	chr9	+	3868	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.633299649054	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974651	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000933_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.110	chr9	+	7162	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	27	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	112.350248997968	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCTTTAGTGAACTT	NA	False	NA	16	True	AATAAA	-27	NA	79974801	80051462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80043288_80043343_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.111	chr9	+	3716	22	NIC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-39	43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	85.1834355204979	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACTTTTCCAACATTTAT	NA	False	NA	NA	False	AGTAAA	-24	NA	79975059	80051330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79975371_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.112	chr9	+	3848	22	NIC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-37	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	85.1834355204979	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79975061	80051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79975371_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.113	chr9	+	3917	23	NIC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	105.129632689463	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79975072	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79975371_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.114	chr9	+	3952	24	NIC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.394345710123	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79975098	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79975371_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.115	chr9	+	3398	20	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-2419	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.949967750386	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79997165	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80029243_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.116	chr9	+	991	2	ISM	ENSMUSG00000034252.15	ENSMUST00000175673.2	1916	5	25372	95	-28	-95	3prime_fragment	FALSE	canonical	3	363	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTCCGTTTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	79999556	80001671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79999695_80000818
ES.35692.118	chr9	+	3428	19	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	31251	-274	-4428	9	3prime_fragment	FALSE	canonical	3	263	junction_1	40.041644987854	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCTTTAGTGAACTT	1800	False	NA	16	True	AATAAA	-27	NA	80006025	80051462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.119	chr9	+	7356	18	FSM	ENSMUSG00000034252.15	ENSMUST00000176607.8	3319	18	-3576	-461	-3576	2	multi-exon	FALSE	canonical	3	296	junction_1	33.6390364767855	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	2652	False	NA	9	True	AATAAA	-20	NA	80006877	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.12	chr9	+	3878	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-19	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	140.948714077142	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	79974165	80051465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.120	chr9	+	10322	19	NNC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-3163	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	118.556232425434	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	3065	False	NA	7	True	AATAAA	-18	NA	80007290	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80007793_80007831_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80043288_80043343_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.121	chr9	+	4611	18	NNC	ENSMUSG00000034252.15	novel	3853	19	NA	NA	-993	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	90.8100416684194	559	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	5235	False	NA	4	True	AATAAA	-15	NA	80009460	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.122	chr9	+	7457	16	NIC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-3505	2	intron_retention	FALSE	canonical	3	313	junction_4	30.5694110000322	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	80017798	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.123	chr9	+	3653	17	ISM	ENSMUSG00000034252.15	ENSMUST00000176607.8	3319	18	7671	-459	-3179	0	3prime_fragment	FALSE	canonical	3	313	junction_4	29.9295396514881	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	80018124	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.124	chr9	+	4410	17	NNC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-2713	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	94.0963394280033	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	80018590	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80036799_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.125	chr9	+	3995	13	ISM	ENSMUSG00000034252.15	ENSMUST00000176607.8	3319	18	16411	-454	-4214	-2	3prime_fragment	FALSE	canonical	3	314	junction_2	26.3844440701124	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	2	True	AATAAA	-13	NA	80026864	80051448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.126	chr9	+	3619	14	NNC	ENSMUSG00000034252.15	novel	3319	18	NA	NA	-3083	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	137.195321396241	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCTCTTTAATTGCA	NA	False	NA	NA	False	AGTAAA	-16	NA	80027995	80052065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80041905_80042044_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.127	chr9	+	4338	6	NNC	ENSMUSG00000034252.15	novel	1445	6	NA	NA	-791	0	intron_retention	FALSE	non_canonical	0	0	junction_1	159.120583206573	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	80042863	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80043288_80043343_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.128	chr9	+	3601	2	ISM	ENSMUSG00000034252.15	ENSMUST00000175722.8	492	5	-3166	2580	-514	-2580	5prime_fragment	FALSE	canonical	3	388	junction_1	0	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGTAGAATAAAGTGCAAC	NA	False	NA	NA	False	NA	NA	NA	80043140	80048411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80046430_80048099
ES.35692.129	chr9	+	3643	3	FSM	ENSMUSG00000034252.15	ENSMUST00000176563.2	614	3	-2867	-162	153	-1	multi-exon	FALSE	canonical	3	376	junction_2	11	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATTAATTTGATATT	NA	False	NA	3	True	AATAAA	-14	NA	80046459	80051449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_80049434_80049526_80049678_80050931
ES.35692.13	chr9	+	4301	23	FSM	ENSMUSG00000034252.15	ENSMUST00000175999.8	4706	23	-205	610	-9	0	multi-exon	FALSE	canonical	3	24	junction_2	83.8945126703669	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974175	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.14	chr9	+	4044	20	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-9	4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	105.324981844546	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGATATTCTTTAGTG	NA	False	NA	11	True	AATAAA	-22	NA	79974175	80051457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.15	chr9	+	4241	23	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_22	106.715695515803	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974176	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050990
ES.35692.16	chr9	+	4463	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.684908424752	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974178	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79995768_79995879_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.17	chr9	+	2986	11	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-6	2498	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	105.526726472491	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGAAGGTTCAAGGC	NA	False	NA	NA	False	AATAAA	-24	NA	79974178	80031831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001
ES.35692.18	chr9	+	4198	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.632092193784	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	79974181	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.2	chr9	+	4637	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-242	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.464054242867	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTTGATATTCTTTA	NA	False	NA	8	True	AATAAA	-19	NA	79973942	80051454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80001790_80001856_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.20	chr9	+	4035	20	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	115.928098835972	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974183	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.21	chr9	+	6709	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	0	1573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.822246885334	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGCGTTGTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-30	NA	79974184	80053808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997193_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.22	chr9	+	4263	16	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-590	15968	0	5887	5prime_fragment	FALSE	canonical	0	0	junction_3	100.00711085829	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTGAGAGTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	79974184	80035220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617
ES.35692.23	chr9	+	4074	21	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	99.7549372211722	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974185	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.24	chr9	+	3852	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.759353252772	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79974185	80051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974209_79974559_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.26	chr9	+	4453	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.414120034218	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974185	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79989609_79989717_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.27	chr9	+	3803	21	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	98.6702969489805	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATGATTAATTTGATA	NA	False	NA	1	True	AATAAA	-12	NA	79974185	80051447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.28	chr9	+	4499	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-588	-416	2	151	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCATCTTTATATGCT	NA	False	NA	NA	False	AATATA	-24	NA	79974186	80051604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.30	chr9	+	3814	22	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	116.885024034465	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974189	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.31	chr9	+	3730	22	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	127.848088710188	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGAAATGATTAATTTG	NA	False	NA	-2	True	AATAAA	-9	NA	79974192	80051444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.32	chr9	+	3948	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	113.499918083489	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	2	True	AATAAA	-13	NA	79974193	80051448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.33	chr9	+	3595	16	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-581	16627	9	5228	5prime_fragment	FALSE	canonical	0	0	junction_3	100.00711085829	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTAAAAGTCTCTAGC	NA	False	NA	NA	False	TATAAA	-13	NA	79974193	80034561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617
ES.35692.34	chr9	+	4161	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.067130588895	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974195	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.35	chr9	+	4347	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.142440856751	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATGATTAATTTGAT	NA	False	NA	0	True	AATAAA	-11	NA	79974195	80051446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994696_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.37	chr9	+	6672	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	12	-1573	12	1573	multi-exon	FALSE	canonical	0	0	junction_3	105.987768279143	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTGCGTTGTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-30	NA	79974196	80053808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.38	chr9	+	3653	20	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	101.991852371346	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTAATTTGATATTCT	NA	False	NA	5	True	AATAAA	-16	NA	79974196	80051451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.4	chr9	+	4487	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-695	-297	-105	32	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTCAGTGTGATTTT	NA	False	NA	39	True	NA	NA	NA	79974079	80051485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.40	chr9	+	3956	20	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	126.202975938502	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTAATTTGATATTCT	NA	False	NA	5	True	AATAAA	-16	NA	79974198	80051451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050990
ES.35692.41	chr9	+	3884	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	109.95870179196	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974204	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.42	chr9	+	4252	22	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-13	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	101.102920103797	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTTGATATTCTTTA	NA	False	NA	8	True	AATAAA	-19	NA	79974204	80051454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.43	chr9	+	4390	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.705564271789	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGATTAATTTGATATT	NA	False	NA	3	True	AATAAA	-14	NA	79974205	80051449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80001790_80001856_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.48	chr9	+	8537	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-9	11	intron_retention	FALSE	canonical	3	24	junction_2	85.7820631500353	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAATTCAGGTAGCGT	NA	False	NA	NA	False	AATAAA	-30	NA	79974208	80052246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.5	chr9	+	4362	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	114.336280873426	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974079	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.50	chr9	+	3784	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-8	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	130.023949716966	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79974209	80051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.51	chr9	+	3077	18	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-564	10812	-7	-3478	5prime_fragment	FALSE	canonical	0	0	junction_3	96.0017661313896	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGCTGAGTCATAAG	NA	False	NA	NA	False	ATTAAA	-23	NA	79974210	80040376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.52	chr9	+	4373	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-7	201	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCTCTTTCATCTGTTC	NA	False	NA	NA	False	AAGAAA	-17	NA	79974210	80051654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.53	chr9	+	4478	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-3	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.45999281587	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGCATAATTCCTCAG	NA	False	NA	30	True	AATAAA	-41	NA	79974214	80051476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006174_80006331_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.55	chr9	+	3958	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.272264065912	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974226	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974258_79974607_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.56	chr9	+	6561	22	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	13	1567	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	117.249680291013	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGATTTGCGTTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	79974230	80053802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.58	chr9	+	4183	22	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-9	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	122.027282180551	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTCTTTAGTGAACTT	NA	False	NA	16	True	AATAAA	-27	NA	79974245	80051462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.6	chr9	+	4002	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-80	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.272264065912	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGATATTCTTTAGTGA	NA	False	NA	12	True	AATAAA	-23	NA	79974104	80051458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974131_79974563_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.60	chr9	+	4132	22	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	97.7234285149965	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTAATTTGATATTCT	NA	False	NA	5	True	AATAAA	-16	NA	79974246	80051451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040268_80043745_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.61	chr9	+	2815	15	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-8	-3531	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	95.0016380095091	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTCTGAAATTTGTTC	NA	False	NA	NA	False	TTTAAA	-2	NA	79974246	80040323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.62	chr9	+	3695	21	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	113.412918135458	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974247	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.63	chr9	+	3575	19	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	119.070577680365	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAATGATTAATTTGATA	NA	False	NA	1	True	AATAAA	-12	NA	79974249	80051447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.64	chr9	+	4041	21	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	122.370043311261	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974252	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010971_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031211_80033478_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.65	chr9	+	5952	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_3	91.8885418984946	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974252	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.66	chr9	+	4717	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	86.9113916584011	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGTGTTCTCTTTAATT	NA	False	NA	NA	False	AGTAAA	-13	NA	79974253	80052062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.67	chr9	+	4894	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.414120034218	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974253	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79989609_79990223_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.68	chr9	+	4168	22	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.802274744738	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTTGATATTCTTTA	NA	False	NA	8	True	AATAAA	-19	NA	79974253	80051454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80009113_80009173_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.69	chr9	+	4117	21	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.9192979150176	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974253	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010966_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.7	chr9	+	4266	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	-56	12	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	79974128	80051465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.70	chr9	+	4134	22	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	97.4046425951708	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATGATTAATTTGAT	NA	False	NA	0	True	AATAAA	-11	NA	79974259	80051446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043721_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.71	chr9	+	3847	19	FSM	ENSMUSG00000034252.15	ENSMUST00000164859.8	3853	19	6	0	6	0	multi-exon	FALSE	canonical	2	8	junction_1	87.8421880419654	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974260	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.73	chr9	+	4845	25	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.515951677776	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	79974278	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79989609_79990197_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.74	chr9	+	4233	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.633299649054	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAAATGATTAATTTGA	NA	False	NA	-1	True	AATAAA	-10	NA	79974282	80051445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010965_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.75	chr9	+	4100	23	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.18327885858	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	79974283	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050990
ES.35692.76	chr9	+	4256	21	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-491	2253	29	-2056	5prime_fragment	FALSE	canonical	0	0	junction_3	92.3744553434552	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTGTGTCATAAACTA	NA	False	NA	NA	False	AATAAA	-16	NA	79974283	80048935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099
ES.35692.77	chr9	+	4237	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	125.110405787703	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	2	True	AATAAA	-13	NA	79974297	80051448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018566_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.78	chr9	+	4872	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	43	5	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCATGTGTAATTCAGG	NA	False	NA	NA	False	AATAAA	-24	NA	79974297	80052240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.79	chr9	+	3557	18	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-477	10245	43	-2911	5prime_fragment	FALSE	canonical	0	0	junction_3	96.0017661313896	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTTTTCTCTCTTTAT	NA	False	NA	NA	False	AAGAAA	-14	NA	79974297	80040943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.81	chr9	+	4176	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.408624084406	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974299	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050990
ES.35692.83	chr9	+	4272	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	48	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	112.577501135061	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79974302	80051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997187_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023782_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.84	chr9	+	4112	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	114.2507391878	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974302	80051453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.85	chr9	+	2978	17	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	49	-3482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	123.392650079938	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTTCTGCTGAGTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	79974303	80040372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000938_80010970_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.86	chr9	+	4038	22	NNC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	50	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	97.7234285149965	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTTTAGTGAACTTGC	NA	False	NA	18	True	AATAAA	-29	NA	79974304	80051464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040213_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.87	chr9	+	4839	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-469	-875	51	0	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGTTCTCTTTAATTG	NA	False	NA	NA	False	AGTAAA	-14	NA	79974305	80052063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.88	chr9	+	3293	19	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	-468	7024	52	310	5prime_fragment	FALSE	canonical	0	0	junction_3	93.8930965526588	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACTGAGAATATTTT	NA	False	NA	NA	False	NA	NA	NA	79974306	80044164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739
ES.35692.9	chr9	+	4313	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-26	31	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	107.922655576931	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCCTCAGTGTGATTT	NA	False	NA	38	True	NA	NA	NA	79974158	80051484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.90	chr9	+	5946	5	FSM	ENSMUSG00000034252.15	ENSMUST00000175673.2	1916	5	122	-4152	52	4152	multi-exon	FALSE	canonical	0	0	junction_3	128.61449179622	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTGAGAATTTTCATG	NA	False	NA	NA	False	ATTAAA	-17	NA	79974306	80005918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818
ES.35692.92	chr9	+	4082	26	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	53	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	147.713593145655	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTAGTGAACTTGCA	NA	False	NA	19	True	AATAAA	-30	NA	79974307	80051465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974517_79974798_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80006511_80006619_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043721_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.93	chr9	+	4344	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109.563423035686	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974312	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994931_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.94	chr9	+	4216	23	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	59	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.633299649054	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTTGATATTCTTTAG	NA	False	NA	9	True	AATAAA	-20	NA	79974313	80051455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000938_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.95	chr9	+	1765	1	NIC	ENSMUSG00000034252.15	novel	1916	5	NA	NA	-60	-18695	mono-exon	FALSE	NA	NA	NA	NA	NA	494	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAAGACTCTTAGTGG	NA	False	NA	NA	False	NA	NA	NA	79974320	79976085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974300_79976100
ES.35692.96	chr9	+	6391	21	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-57	1567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.9192979150176	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGATTTGCGTTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	79974323	80053802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010971_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35692.97	chr9	+	2866	17	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	-57	-3482	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	117.27638295923	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTTTCTGCTGAGTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	79974323	80040372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170
ES.35692.98	chr9	+	4046	21	NNC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.9192979150176	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAATTTGATATTC	NA	False	NA	4	True	AATAAA	-15	NA	79974326	80051450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_79974855_79999548_79999695_80000818_80000938_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ES.35693.1	chr9	-	274	1	Intergenic	novelGene_29081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	79993978	79993704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_79993700_79994000
ES.35694.1	chr9	-	174	1	Intergenic	novelGene_29082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGCCAGCAAGGA	1725	False	NA	NA	False	NA	NA	NA	80002343	80002169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_80002200_80002300
ES.35695.1	chr9	-	3496	2	Antisense	novelGene_ENSMUSG00000034252.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAAGTTCAAACAAACTA	4468	False	NA	NA	False	NA	NA	NA	80008385	80004850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_80007791_80007829
ES.35696.1	chr9	-	169	1	Intergenic	novelGene_29083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	80020115	80019946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_80019900_80020100
ES.35697.1	chr9	+	5559	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-45	797	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGATTGGTGTCTTTA	4809	False	NA	25	True	AATAAA	-28	NA	80072267	80216681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.10	chr9	+	4850	27	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	0	790	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.5606291507848	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTCACTTTTGATTGGT	4854	False	NA	18	True	AATAAA	-21	NA	80072312	80216674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.12	chr9	+	7828	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTTGTGTATTGTGT	4866	False	NA	NA	False	AATAAA	-16	NA	80072324	80219007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.13	chr9	+	4634	24	ISM	ENSMUSG00000033577.19	ENSMUST00000113266.8	7632	31	28764	2337	-15654	790	3prime_fragment	FALSE	canonical	3	51	junction_5	8.97781344289916	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCTCACTTTTGATTGGT	NA	False	NA	18	True	AATAAA	-21	NA	80153674	80216674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.14	chr9	+	4622	28	ISM	ENSMUSG00000033577.19	ENSMUST00000184480.8	4139	36	81297	-1291	-15523	786	3prime_fragment	FALSE	canonical	0	0	junction_25	30.2164119324017	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCGCTCACTTTTGAT	NA	False	NA	14	True	AATAAA	-17	NA	80153805	80216670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80200808_80200836_80201226_80201257_80203924_80203964_80206427_80206532_80207816_80207949_80210554_80210582_80214241_80214461_80214953
ES.35697.15	chr9	+	4386	22	ISM	ENSMUSG00000033577.19	ENSMUST00000113266.8	7632	31	37249	2339	-7169	788	3prime_fragment	FALSE	canonical	3	51	junction_3	9.26407735566261	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGCTCACTTTTGATTG	NA	False	NA	16	True	AATAAA	-19	NA	80162159	80216672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.16	chr9	+	7958	18	NNC	ENSMUSG00000033577.19	novel	7663	32	NA	NA	4112	789	intron_retention	FALSE	non_canonical	0	0	junction_11	28.2194808659908	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGCTCACTTTTGATTGG	8358	False	NA	17	True	AATAAA	-20	NA	80173440	80216673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80195650_80195742_80197147_80197227_80199638_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.17	chr9	+	2973	1	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-3357	-1479	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80189338	80192311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80189300_80192300
ES.35697.18	chr9	+	2889	8	ISM	ENSMUSG00000033577.19	ENSMUST00000113266.8	7632	31	68538	2339	-114	788	3prime_fragment	FALSE	canonical	3	56	junction_2	9.40690150465961	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGCTCACTTTTGATTG	NA	False	NA	16	True	AATAAA	-19	NA	80193448	80216672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.2	chr9	+	5588	33	NIC	ENSMUSG00000033577.19	novel	7927	35	NA	NA	-34	798	combination_of_known_junctions	TRUE	canonical	3	6	junction_28	17.6442437054553	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGATTGGTGTCTTTAT	4820	False	NA	26	True	AATAAA	-29	NA	80072278	80216682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80203924_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.4	chr9	+	5524	32	NNC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	-31	787	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.8899678747944	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATCGCTCACTTTTGATT	4823	False	NA	15	True	AATAAA	-18	NA	80072281	80216671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136167_80136270_80149429_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.5	chr9	+	5611	34	NIC	ENSMUSG00000033577.19	novel	4139	36	NA	NA	-23	802	combination_of_known_junctions	FALSE	canonical	2	3	junction_29	21.0251500105475	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGTCTTTATTTGT	4831	False	NA	30	True	AATAAA	-33	NA	80072289	80216686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80201226_80201257_80203924_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
ES.35697.6	chr9	+	2179	10	ISM	ENSMUSG00000033577.19	ENSMUST00000184480.8	4139	36	-217	55213	-21	-13787	5prime_fragment	FALSE	canonical	3	64	junction_5	7.6658614714046	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTATTGGTACTAGTTAA	4833	False	NA	NA	False	AATAAA	-12	NA	80072291	80160166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048
ES.35697.7	chr9	+	5556	33	FSM	ENSMUSG00000033577.19	ENSMUST00000035889.15	7871	33	-17	2332	-17	795	multi-exon	FALSE	canonical	0	0	junction_30	19.7791517449561	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGATTGGTGTCTT	4837	False	NA	23	True	AATAAA	-26	NA	80072295	80216679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80210554_80210582_80214241_80214461_80214953
ES.35697.8	chr9	+	1837	11	ISM	ENSMUSG00000033577.19	ENSMUST00000184480.8	4139	36	-204	52510	-8	-11084	5prime_fragment	FALSE	canonical	3	64	junction_5	7.28010988928052	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCATCGTCTGTGTATT	4846	False	NA	NA	False	NA	NA	NA	80072304	80162869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161
ES.35698.1	chr9	-	2851	1	Antisense	novelGene_ENSMUSG00000033577.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTCTCC	NA	False	NA	NA	False	NA	NA	NA	80138692	80135841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_80135800_80138700
ES.35699.1	chr9	-	2276	1	Antisense	novelGene_ENSMUSG00000033577.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80184286	80182010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_80182000_80184300
ES.357.1	chr1	-	1807	1	Antisense	novelGene_ENSMUSG00000003135.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	-32	True	NA	NA	False	NA	NA	NA	39577415	39575608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_39575600_39577400
ES.3570.1	chr10	+	177	1	Intergenic	novelGene_2729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTTATATT	3725	False	NA	NA	False	NA	NA	NA	90973984	90974161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_90974000_90974200
ES.35700.1	chr9	-	184	1	Intergenic	novelGene_29084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTACATGGAACCATTA	NA	False	NA	NA	False	NA	NA	NA	80322487	80322303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_80322300_80322500
ES.35701.1	chr9	-	149	1	Intergenic	novelGene_29085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAACAAATAA	NA	False	NA	NA	False	NA	NA	NA	80512315	80512166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_80512200_80512300
ES.35702.1	chr9	+	1796	2	Intergenic	novelGene_29086	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAACAAACTGGCTACACA	NA	False	NA	NA	False	NA	NA	NA	81064748	81066758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_81064906_81065119
ES.35703.1	chr9	+	2270	1	Intergenic	novelGene_29087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	81308434	81310704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_81308400_81310700
ES.35704.1	chr9	-	4745	2	FSM	ENSMUSG00000049511.6	ENSMUST00000183482.2	4724	2	-23	2	-23	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTAGTAGTAGTTCT	NA	False	NA	NA	False	AATAAA	-44	NA	81515904	81510345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_81514925_81515738
ES.35704.2	chr9	-	3979	2	FSM	ENSMUSG00000049511.6	ENSMUST00000183482.2	4724	2	-3	748	-3	-748	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGTTGTTTGCCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	81515884	81511091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_81514925_81515738
ES.35705.1	chr9	+	1136	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	-73	-288	-59	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81559591	81560727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_81559600_81560700
ES.35705.2	chr9	+	688	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	-57	7	-57	-7	multi-exon	FALSE	canonical	3	2455	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81559593	81560723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_81559913_81560354
ES.35706.1	chr9	+	2126	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	-24	568	-24	0	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGGTTGAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	81745698	81908511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
ES.35706.2	chr9	+	1876	4	FSM	ENSMUSG00000043289.13	ENSMUST00000189391.2	1817	4	-59	0	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	20.6774165590278	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGGTTGAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	81745702	81908511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_81745971_81809150_81809687_81861178_81861311_81907571
ES.35706.3	chr9	+	4676	5	FSM	ENSMUSG00000043289.13_ENSMUSG00000103536.2	ENSMUST00000057067.10	2670	5	26	-2032	-9	-125	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTTGCCTGGCTCG	NA	False	NA	NA	False	NA	NA	NA	81745748	81911111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
ES.35706.4	chr9	+	2426	3	NNC	ENSMUSG00000043289.13	novel	2670	5	NA	NA	28	-120454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCATCTTGCTTGTGCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	81745789	81788057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_81745971_81772174_81772421_81786058
ES.35706.5	chr9	+	2082	6	NNC	ENSMUSG00000043289.13	novel	2670	5	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.2787434038274	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTACTGGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	81745833	81908510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81881915_81882008_81907571
ES.35706.6	chr9	+	4535	5	Fusion	ENSMUSG00000043289.13_ENSMUSG00000103536.2	novel	2670	5	NA	NA	112	-148	multi-exon	FALSE	non_canonical	0	0	junction_1	17.9094946885723	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATACTGTGCAGCATTG	NA	False	NA	NA	False	NA	NA	NA	81745873	81911088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_81745971_81772167_81772421_81809150_81809687_81861178_81861311_81907571
ES.35706.7	chr9	+	1751	1	Intergenic	novelGene_29088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	4619	False	NA	NA	False	NA	NA	NA	81868430	81870181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_81868400_81870200
ES.35707.1	chr9	-	232	1	Intergenic	novelGene_29089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACTATGAAGAGAATGA	NA	False	NA	NA	False	NA	NA	NA	81974914	81974682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_81974700_81974900
ES.35708.1	chr9	+	1901	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	264	-7	-2	7	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGATCTCTGTGGTCTT	NA	False	NA	11	True	NA	NA	NA	82711856	82729747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ES.35708.2	chr9	+	1123	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	445	590	179	77	multi-exon	FALSE	canonical	3	114	junction_3	13.589211407093	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGTTGTCATGTCTT	NA	False	NA	NA	False	AATAAA	-41	NA	82712037	82729150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ES.35708.3	chr9	+	1035	3	FSM	ENSMUSG00000032251.13	ENSMUST00000034783.6	1159	3	194	-70	194	70	multi-exon	FALSE	canonical	1	5	junction_1	54.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCGCAAAACAGGTTGTC	NA	False	NA	NA	False	AATAAA	-34	NA	82712052	82729143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_82712393_82728351_82728483_82728579
ES.35708.4	chr9	+	4185	2	ISM	ENSMUSG00000032251.13	ENSMUST00000034783.6	1159	3	12988	-55	12988	55	3prime_fragment	FALSE	canonical	3	114	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTGAATTTTTACTTC	NA	False	NA	NA	False	AATAAA	-19	NA	82724846	82729128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_82728483_82728579
ES.35709.1	chr9	+	5855	1	Antisense	novelGene_ENSMUSG00000032253.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCTAAGTAGCAACACAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	82756488	82762343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_82756500_82762300
ES.3571.1	chr10	-	177	1	Intergenic	novelGene_2730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	90978420	90978243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_90978200_90978400
ES.35710.1	chr9	+	3367	1	Intergenic	novelGene_29090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGAAAAGGAAACATAGAAA	NA	False	NA	NA	False	NA	NA	NA	82816849	82820216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_82816800_82820200
ES.35710.2	chr9	+	4257	1	Intergenic	novelGene_29091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCATGATATTATTTA	NA	False	NA	NA	False	NA	NA	NA	82816849	82821106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_82816800_82821100
ES.35711.1	chr9	+	7313	1	Antisense	novelGene_ENSMUSG00000032253.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACTAAAAAATAACCA	631	False	NA	NA	False	NA	NA	NA	82831089	82838402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_82831100_82838400
ES.35712.1	chr9	+	171	1	Intergenic	novelGene_29092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	82851043	82851214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_82851000_82851200
ES.35713.1	chr9	-	9588	1	Genic_Genomic	ENSMUSG00000032253.14	novel	NA	NA	NA	NA	17274	832	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGATTAAAAGCCAGAGC	NA	False	NA	NA	False	NA	NA	NA	82756967	82747379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_82747400_82757000
ES.35713.10	chr9	-	6630	1	NIC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	19136	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTTTGTAGAGCCTC	NA	False	NA	-6	True	AATAAA	-19	NA	82755105	82748475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82748500_82755100
ES.35713.13	chr9	-	7772	5	ISM	ENSMUSG00000032253.14	ENSMUST00000190774.2	3830	17	17471	-3898	13287	-265	3prime_fragment	FALSE	canonical	3	58	junction_2	7.92148975887743	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCATTTTGTAGAGCCT	NA	False	NA	-7	True	AATAAA	-18	NA	82760954	82748476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242
ES.35713.15	chr9	-	4013	5	NNC	ENSMUSG00000032253.14	novel	3830	17	NA	NA	15416	-266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.3428015022424	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCATTTTGTAGAGCC	NA	False	NA	-8	True	AATAAA	-17	NA	82758825	82748477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82749179_82751107_82753915_82757342_82757541_82758061_82758322_82758778
ES.35713.16	chr9	-	5078	6	ISM	ENSMUSG00000032253.14	ENSMUST00000190774.2	3830	17	16139	-2641	11955	-1522	3prime_fragment	FALSE	canonical	3	58	junction_2	7.54718490564528	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTTGTTTGCGTGAA	NA	False	NA	NA	False	AAGAAA	-13	NA	82762286	82749733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164
ES.35713.17	chr9	-	7915	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	31	2810	31	1353	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGGAAGTGCGCACAG	NA	False	NA	NA	False	AATAAA	-22	NA	82857538	82751021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.18	chr9	-	7801	40	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	37	1250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	15.1406728285606	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTATTTGAGAAATGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	82857532	82751124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789109_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814540_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.19	chr9	-	7821	41	NIC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-7	1248	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	14.6696114467971	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAATCTATTTGAGAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	82857486	82751126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.2	chr9	-	1720	1	Genic_Genomic	ENSMUSG00000032253.14	novel	NA	NA	NA	NA	24578	268	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAACAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	82749663	82747943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_82747900_82749700
ES.35713.21	chr9	-	7678	40	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	31	1119	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	12.9783616000821	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTAGTTACTCTTCATA	NA	False	NA	NA	False	ATTAAA	-2	NA	82857538	82751255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789109_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.23	chr9	-	7455	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	70	3231	-20	932	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGGGCTTTTTAGATC	NA	False	NA	NA	False	GATAAA	-38	NA	82857499	82751442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.25	chr9	-	7538	42	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	32	845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.4826236384765	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTAATTAGATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	82857537	82751529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758603_82758676_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789109_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.26	chr9	-	5694	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	5	5057	5	-894	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTGCATTTTAAAAA	NA	False	NA	NA	False	AAAAAG	-35	NA	82857564	82753268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.27	chr9	-	5152	31	ISM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	82	19110	-8	3634	5prime_fragment	FALSE	canonical	3	34	junction_19	8.9679057384282	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGGAGTGAGATCACGA	NA	False	NA	NA	False	ATTAAA	-27	NA	82857487	82767321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.28	chr9	-	3731	30	ISM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	26	21358	26	1386	5prime_fragment	FALSE	canonical	3	34	junction_18	8.67623484753655	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTAAATAAGTAATAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	82857543	82769569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.29	chr9	-	4471	28	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	22	1695	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	16.3850277937655	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGCAGTGGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	82857547	82774388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82793314_82793437_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814594_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.3	chr9	-	10762	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	8	-14	8	14	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGTTATTGGTTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	82857561	82748197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.30	chr9	-	3366	23	NIC	ENSMUSG00000032253.14	novel	3317	25	NA	NA	3	90	intron_retention	FALSE	canonical	1	1	junction_18	12.0556560574366	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTAGACCAGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	82857476	82775993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140
ES.35713.31	chr9	-	2963	23	ISM	ENSMUSG00000032253.14	ENSMUST00000188868.7	3317	25	-78	6592	30	33	5prime_fragment	FALSE	canonical	3	34	junction_11	7.22484235865655	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGATTTACAATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	82857539	82782675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.32	chr9	-	2879	24	NIC	ENSMUSG00000032253.14	novel	3317	25	NA	NA	-3	-50	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	13.8656802518622	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAGAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82857475	82782758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.33	chr9	-	6244	1	FSM	ENSMUSG00000032253.14	ENSMUST00000186099.2	1794	1	-1689	-2761	-1689	24	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTCCATGAAGTCA	NA	False	NA	NA	False	TTTAAA	-41	NA	82801351	82795107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82795100_82801400
ES.35713.34	chr9	-	4826	16	NIC	ENSMUSG00000032253.14	novel	2623	17	NA	NA	22	24	intron_retention	FALSE	canonical	3	34	junction_5	7.88979650490993	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTCCATGAAGTCA	NA	False	NA	NA	False	TTTAAA	-41	NA	82857547	82795107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.35	chr9	-	2995	18	NIC	ENSMUSG00000032253.14	novel	2623	17	NA	NA	-195	24	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	15.6167331071891	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTCCATGAAGTCA	NA	False	NA	NA	False	TTTAAA	-41	NA	82857764	82795107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.36	chr9	-	4858	17	NIC	ENSMUSG00000032253.14	novel	2623	17	NA	NA	-37	24	intron_retention	FALSE	canonical	1	2	junction_3	16.0952972557204	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTTTCCATGAAGTCA	NA	False	NA	NA	False	TTTAAA	-41	NA	82857516	82795107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.4	chr9	-	9162	27	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	14.6675183543283	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTGTCTACTTAGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	82810228	82748213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82791863_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152
ES.35713.5	chr9	-	10494	40	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-1	-260	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	12.9783616000821	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTAGAGCCTCATGA	NA	False	NA	-2	True	AATAAA	-23	NA	82857570	82748471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789109_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.7	chr9	-	10312	39	NIC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	21	-262	combination_of_known_splicesites	FALSE	canonical	1	1	junction_33	13.1417005607649	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	-4	True	AATAAA	-21	NA	82857548	82748473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.8	chr9	-	10476	41	NIC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	-9	-262	combination_of_known_junctions	FALSE	canonical	1	2	junction_26	14.6696114467971	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	-4	True	AATAAA	-21	NA	82857488	82748473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82798014_82798078_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ES.35713.9	chr9	-	10390	39	NNC	ENSMUSG00000032253.14	novel	10756	40	NA	NA	1	-262	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	13.4363174284765	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	-4	True	AATAAA	-21	NA	82857478	82748473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82857123_82857200_82857304
ES.35714.1	chr9	-	4427	1	Intergenic	novelGene_29093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCTATCGCCAACTAGGC	1433	False	NA	NA	False	NA	NA	NA	82907301	82902874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_82902900_82907300
ES.35715.1	chr9	-	873	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	-11	0	-11	0	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028669	82992000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ES.35715.2	chr9	-	768	5	NIC	ENSMUSG00000066456.15	novel	862	6	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	18.8015956769632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028637	82992000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_82992483_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ES.35715.3	chr9	-	1118	6	Fusion	ENSMUSG00000098747.8_ENSMUSG00000066456.15	novel	862	6	NA	NA	3618	0	multi-exon	FALSE	canonical	0	0	junction_5	18.6719040271741	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	8725	False	NA	-6	True	AATAAA	-18	NA	83132457	82992000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83132026
ES.35715.4	chr9	-	1437	5	FSM	ENSMUSG00000066456.15	ENSMUST00000185315.7	1391	5	-46	0	29	0	multi-exon	FALSE	canonical	3	40	junction_3	4.7169905660283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028629	82992000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ES.35716.1	chr9	+	542	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	-38	-37	-38	37	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCATTACATT	NA	False	NA	NA	False	AATAAA	-15	NA	83291674	83292216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83291700_83292200
ES.35717.1	chr9	+	680	1	Intergenic	novelGene_29094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAGGAACAATCTGG	NA	False	NA	NA	False	NA	NA	NA	83320089	83320769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_83320100_83320800
ES.35718.1	chr9	-	6156	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	4	7	intron_retention	FALSE	canonical	1	2	junction_7	9.37647947509825	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTTTATTTCTGGCA	NA	False	NA	NA	False	TTTAAA	-5	NA	83323142	83273409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323089
ES.35718.10	chr9	-	4268	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	-109	1	-9	-1	multi-exon	FALSE	canonical	3	4	junction_7	8.75051018920774	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	-6	True	AATAAA	-13	NA	83323189	83275472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322961
ES.35718.12	chr9	-	4218	9	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.7446796465463	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	-6	True	AATAAA	-13	NA	83323145	83275472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310450_83310577_83323093
ES.35718.13	chr9	-	4263	9	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	10.7819293264239	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGATCCTTTATTTG	NA	False	NA	-8	True	AATAAA	-11	NA	83323159	83275474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83287862_83287905_83305075_83305606_83308645_83309015_83322976
ES.35718.15	chr9	-	3291	6	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.1821285987955	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGATCCTTTATTTG	NA	False	NA	-8	True	AATAAA	-11	NA	83323128	83275474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83322976
ES.35718.16	chr9	-	4201	10	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.2194716101016	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGGGATCCTTTA	NA	False	NA	-12	True	AATAAA	-7	NA	83323145	83275478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83287862_83287905_83305075_83305606_83308645_83309015_83310932_83311002_83323089
ES.35718.17	chr9	-	4178	9	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	10.7819293264239	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGGGATCCTTTA	NA	False	NA	-12	True	AATAAA	-7	NA	83323191	83275478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83287862_83287905_83305075_83305606_83308645_83309015_83323089
ES.35718.18	chr9	-	8331	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	9.8685234509546	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGGGATCCTTTA	NA	False	NA	-12	True	AATAAA	-7	NA	83323156	83275478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83287905_83305075_83305606_83308645_83309015_83322961
ES.35718.2	chr9	-	6076	8	NNC	ENSMUSG00000032258.16	novel	2001	8	NA	NA	4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.568181398813	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTTTATTTCTGGCA	NA	False	NA	NA	False	TTTAAA	-5	NA	83323142	83273409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83273927_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83287905_83305075_83305606_83308645_83309015_83323089
ES.35718.3	chr9	-	8302	9	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	10.9765374777295	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTTATTTGAATGACAC	NA	False	NA	0	True	AATAAA	-19	NA	83323178	83275466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83287905_83305075_83305606_83308645_83309015_83310932_83311002_83323093
ES.35718.4	chr9	-	4112	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	9.37647947509825	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTTATTTGAATGACA	NA	False	NA	-1	True	AATAAA	-18	NA	83323156	83275467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323089
ES.35718.5	chr9	-	4162	9	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	10.5948100502085	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323145	83275471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310932_83311002_83323093
ES.35718.6	chr9	-	4210	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	9.37647947509825	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323145	83275471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322976
ES.35718.8	chr9	-	4188	8	NNC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.0122374102487	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323136	83275471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322989
ES.35718.9	chr9	-	4348	9	NIC	ENSMUSG00000032258.16	novel	4160	8	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	10.5948100502085	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGATCCTTTATTTGAA	NA	False	NA	-6	True	AATAAA	-13	NA	83323200	83275472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83310932_83311002_83322961
ES.35719.1	chr9	-	133	1	Intergenic	novelGene_29095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	83401310	83401177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83401200_83401300
ES.3572.1	chr10	+	1397	1	Antisense	novelGene_ENSMUSG00000019961.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAGAAATGACTATGTCG	NA	False	NA	NA	False	CATAAA	-40	NA	91005127	91006524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_91005100_91006500
ES.35720.1	chr9	+	3697	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-186	1054	-185	-1054	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGTTTCTTCCCA	NA	False	NA	NA	False	AATAAA	-24	NA	83430194	83482345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.10	chr9	+	1061	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-1	3505	0	317	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGCTTCCAAAACCTCCA	NA	False	NA	NA	False	TATAAA	-17	NA	83430379	83479894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.11	chr9	+	3316	3	NIC	ENSMUSG00000032261.17	novel	4565	4	NA	NA	0	-1062	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	65.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAGCTGGAGTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	83430381	83482337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83430557_83476710_83476792_83479277
ES.35720.12	chr9	+	6094	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	7	-1536	6	1536	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGATGTTCACATGTTAG	NA	False	NA	NA	False	NA	NA	NA	83430387	83484935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.13	chr9	+	6267	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	24	-1726	2	1726	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACGTGTTCCCATAAG	NA	False	NA	NA	False	NA	NA	NA	83430404	83485125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.14	chr9	+	207	1	Intergenic	novelGene_29096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGACATATAGTTTAG	NA	False	NA	NA	False	NA	NA	NA	83473474	83473681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_83473500_83473700
ES.35720.2	chr9	+	4611	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-46	0	-45	0	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTATTTTTCCTTC	NA	False	NA	9	True	AATAAA	-16	NA	83430334	83483399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.3	chr9	+	3625	5	NNC	ENSMUSG00000032261.17	novel	4565	4	NA	NA	-45	-1054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.2934095362644	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGTTTCTTCCCA	NA	False	NA	NA	False	AATAAA	-24	NA	83430334	83482345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83430557_83459488_83459675_83476710_83476792_83479087_83479156_83479277
ES.35720.4	chr9	+	6470	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-35	-1870	-34	1870	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGTCTTGATAAAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	83430345	83485269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.5	chr9	+	3304	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-29	1290	-28	-1290	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAAGGCTTTTTATGTT	NA	False	NA	NA	False	AATATA	-23	NA	83430351	83482109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.6	chr9	+	5267	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-12	-690	-11	690	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTCTGTCAGCCATGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	83430368	83484089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.7	chr9	+	1274	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-9	3300	-8	522	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCGTTTTCAGCTCTTG	NA	False	NA	NA	False	AATAGA	-20	NA	83430371	83480099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35720.8	chr9	+	4490	3	NIC	ENSMUSG00000032261.17	novel	4565	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	55	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTATTTTTCCTTC	NA	False	NA	9	True	AATAAA	-16	NA	83430374	83483399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83430557_83459488_83459675_83479277
ES.35720.9	chr9	+	4997	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	-4	-428	-3	428	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTGTCAAACTTCTCT	NA	False	NA	NA	False	NA	NA	NA	83430376	83483827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ES.35721.1	chr9	-	130	1	Intergenic	novelGene_29097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83527428	83527298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83527300_83527400
ES.35722.1	chr9	-	173	1	Intergenic	novelGene_29098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGGAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	83533179	83533006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83533000_83533200
ES.35723.1	chr9	-	3038	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	-38	1	-13	-1	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCCGTCGTTGATTT	NA	False	NA	0	True	AATAAA	-25	NA	83688343	83660745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
ES.35723.2	chr9	-	2982	6	NNC	ENSMUSG00000032262.14	novel	3001	6	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.8594187325661	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGTGACTCTGTCCGT	NA	False	NA	-9	True	AATAAA	-16	NA	83688317	83660754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672050_83672218_83687991
ES.35723.3	chr9	-	2208	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	-39	832	-14	-832	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAGTCCTCTAATGTA	NA	False	NA	NA	False	AATAAA	-19	NA	83688344	83661576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
ES.35723.4	chr9	-	1926	1	NIC	ENSMUSG00000032262.14	novel	782	4	NA	NA	1	-23688	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTGAGAGCAAAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	83688329	83686403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_83686400_83688300
ES.35724.1	chr9	+	2935	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-60	-4	-31	1	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGTCAGTTTCTTCAA	NA	False	NA	14	True	AATAAA	-25	NA	83716710	83754443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.11	chr9	+	2659	21	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.090870266217	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83716764	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721778_83721886_83725133_83725278_83725680_83725796_83725938_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.12	chr9	+	3208	21	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_13	77.7684222547944	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83716767	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739459_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747241_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.13	chr9	+	2685	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-3	189	-3	-189	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTAGATTATCCTCAA	NA	False	NA	-76	True	AAAACA	-12	NA	83716767	83754250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.14	chr9	+	4033	21	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	11	junction_17	58.2298033656306	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGTACAGTGGTCA	NA	False	NA	4	True	AATAAA	-15	NA	83716768	83754433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747241_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.15	chr9	+	5810	20	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-2	0	intron_retention	FALSE	canonical	3	11	junction_16	59.7150203592839	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	83716768	83754439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747241_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.17	chr9	+	2795	22	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	59.0995163640712	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83716769	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750170_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.18	chr9	+	2945	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	73.9663202337768	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGTACAGTGGTCA	NA	False	NA	4	True	AATAAA	-15	NA	83716769	83754433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83745718_83745798_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.19	chr9	+	2947	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	74.5741768391691	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83716770	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83726402_83726481_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.20	chr9	+	4210	19	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	0	-2313	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	73.8957390308371	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTTTTGTGTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	83716770	83749233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83745718_83745798_83747130
ES.35724.21	chr9	+	5571	7	NIC	ENSMUSG00000038379.16	novel	2711	21	NA	NA	4	7120	intron_retention	FALSE	canonical	3	211	junction_6	17.4547032821147	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATCACAGGAGGCCAC	NA	False	NA	NA	False	NA	NA	NA	83716774	83733600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83726010_83726099_83729306_83732624
ES.35724.22	chr9	+	2969	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.2920756156067	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTACAGTGGTCAGT	NA	False	NA	6	True	AATAAA	-17	NA	83716775	83754435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83726402_83726481_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747241_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.23	chr9	+	2695	20	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	81.4473641697134	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83716776	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83732624_83732762_83735139_83735229_83736855_83737018_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.24	chr9	+	2499	20	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	61.9110254256225	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGGTCAGTTTCTTC	NA	False	NA	12	True	AATAAA	-23	NA	83716776	83754441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83716813_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.25	chr9	+	2701	21	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	60.3618256847819	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTACAGTGGTCAGT	NA	False	NA	6	True	AATAAA	-17	NA	83716782	83754435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83716813_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.26	chr9	+	3023	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.3057353322081	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTGTACAGTGGTCAG	NA	False	NA	5	True	AATAAA	-16	NA	83716802	83754434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716924_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83726402_83726481_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.27	chr9	+	2932	22	NNC	ENSMUSG00000038379.16	novel	600	5	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.6640633339261	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGTACAGTGGTCA	NA	False	NA	4	True	AATAAA	-15	NA	83716814	83754433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716924_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.28	chr9	+	3956	3	NNC	ENSMUSG00000038379.16	novel	2711	21	NA	NA	6153	594	intron_retention	FALSE	non_canonical	0	0	junction_1	125.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAATTGGCTGCCGAATG	NA	False	NA	NA	False	NA	NA	NA	83722971	83727074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83723898_83723954_83726010_83726099
ES.35724.29	chr9	+	2204	1	NIC	ENSMUSG00000038379.16	novel	2711	21	NA	NA	8052	594	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAATTGGCTGCCGAATG	NA	False	NA	NA	False	NA	NA	NA	83724870	83727074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83724900_83727100
ES.35724.3	chr9	+	3048	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	-60	-117	-31	114	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAGGACTGTAAACAG	NA	False	NA	NA	False	NA	NA	NA	83716710	83754556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.30	chr9	+	2200	18	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	8440	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	65.6797304319938	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTACAGTGGTCAGT	NA	False	NA	6	True	AATAAA	-17	NA	83725258	83754435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729212_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.31	chr9	+	5485	15	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	8495	-3	intron_retention	FALSE	canonical	3	27	junction_4	65.9698833575146	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTACAGTGGTCAGTT	NA	False	NA	7	True	AATAAA	-18	NA	83725313	83754436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83725796_83725936_83726010_83726099_83729306_83732624_83732762_83735136_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.32	chr9	+	5621	1	NIC	ENSMUSG00000038379.16	novel	2711	21	NA	NA	11161	7120	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATCACAGGAGGCCAC	NA	False	NA	NA	False	NA	NA	NA	83727979	83733600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83728000_83733600
ES.35724.33	chr9	+	1755	12	ISM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	15819	4	15771	-4	3prime_fragment	FALSE	canonical	3	226	junction_2	31.3284387478879	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTACAGTGGTCAGT	NA	False	NA	6	True	AATAAA	-17	NA	83732589	83754435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.34	chr9	+	4589	8	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	20836	-6	intron_retention	FALSE	canonical	3	232	junction_7	35.8716532962182	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTGTACAGTGGTCA	NA	False	NA	4	True	AATAAA	-15	NA	83737654	83754433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83739464_83744214_83744373_83744500_83744653_83745497_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.35	chr9	+	4638	7	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	21636	-2	intron_retention	FALSE	canonical	3	232	junction_6	38.3003481272255	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83738454	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83739464_83744214_83744373_83744500_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.36	chr9	+	5766	3	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	28793	-2	intron_retention	FALSE	canonical	3	232	junction_2	27.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACAGTGGTCAGTTT	NA	False	NA	8	True	AATAAA	-19	NA	83745611	83754437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83750273_83750628_83751334_83754037
ES.35724.4	chr9	+	4050	21	NIC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	-20	-7	intron_retention	FALSE	canonical	3	211	junction_9	28.1589683759899	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAACTGTACAGTGGTC	NA	False	NA	3	True	AATAAA	-14	NA	83716721	83754432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35724.5	chr9	+	1865	8	ISM	ENSMUSG00000038379.16	ENSMUST00000186277.2	999	9	-64	-594	-12	594	intron_retention	FALSE	canonical	3	220	junction_5	14.2427926635594	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAATTGGCTGCCGAATG	NA	False	NA	NA	False	NA	NA	NA	83716729	83727074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099
ES.35724.7	chr9	+	2716	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	0	-5	0	5	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCGACAACATTCTTTA	NA	False	NA	5	True	AATAAA	-20	NA	83716741	83751551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ES.35724.8	chr9	+	5305	21	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_6	77.4022609488896	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAGAACTGTACAGTGG	NA	False	NA	1	True	AATAAA	-12	NA	83716742	83754430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725938_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747241_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ES.35725.1	chr9	-	5874	2	Antisense	novelGene_ENSMUSG00000038379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTGAACACCAGCCCC	NA	False	NA	NA	False	ACTAAA	-33	NA	83726617	83720653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_83726009_83726098
ES.35725.2	chr9	-	3644	2	Antisense	novelGene_ENSMUSG00000038379.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTGAACACCAGCCCC	NA	False	NA	NA	False	ACTAAA	-33	NA	83724353	83720653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_83723899_83723954
ES.35726.1	chr9	+	3860	1	Intergenic	novelGene_29099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	83764243	83768103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_83764200_83768100
ES.35727.1	chr9	+	1733	9	ISM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-19	54391	-19	-54350	5prime_fragment	FALSE	canonical	3	595	junction_3	43.6799439102204	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGTTTATAAATGTGT	NA	False	NA	NA	False	TATAAA	-14	NA	83807178	83951901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157
ES.35727.10	chr9	+	1582	11	FSM	ENSMUSG00000032263.15	ENSMUST00000034801.11	1472	11	0	-110	0	109	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGACTTTTCCATTT	NA	False	NA	NA	False	AGTAAA	-14	NA	83807202	84006402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.11	chr9	+	2420	1	NIC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	1	-196628	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83807203	83809623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83807200_83809600
ES.35727.12	chr9	+	3967	3	ISM	ENSMUSG00000032263.15	ENSMUST00000034801.11	1472	11	3	166845	3	-166804	5prime_fragment	FALSE	canonical	3	668	junction_1	14	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTCCTTCCCTGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	83807205	83839447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83807413_83834576_83834655_83835765
ES.35727.13	chr9	+	4646	7	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	3	-121972	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_6	249.162374544972	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAGGAGACAACAACA	NA	False	NA	NA	False	NA	NA	NA	83807205	83884279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83874523_83881033
ES.35727.14	chr9	+	7060	6	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	5	-121973	intron_retention	FALSE	canonical	1	1	junction_5	261.544183647811	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAACAGGAGACAACAAC	NA	False	NA	NA	False	NA	NA	NA	83807207	83884278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83874523_83881033
ES.35727.17	chr9	+	1243	9	NIC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	223.27278019275	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGACTGTGTGTGTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	83807218	84006288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83951157_83951245_84004286_84004436_84006021
ES.35727.18	chr9	+	2239	2	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	18	-196628	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	83807220	83809623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83808898_83809061
ES.35727.19	chr9	+	2946	3	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	262	-167726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAACAAACATACAAAAATC	NA	False	NA	NA	False	NA	NA	NA	83807464	83838525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83807573_83834576_83834655_83835765
ES.35727.2	chr9	+	1496	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807178	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.20	chr9	+	3838	2	ISM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	2739	167772	2739	-167730	internal_fragment	FALSE	canonical	3	696	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAACAAACATACAAA	NA	False	NA	NA	False	NA	NA	NA	83833572	83838521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83834655_83835765
ES.35727.21	chr9	+	4414	8	ISM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	36692	5	36692	-4	3prime_fragment	FALSE	canonical	3	616	junction_7	43.4276315687774	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGACTGTGTGTGTGTC	960	False	NA	NA	False	AATAAA	-15	NA	83867525	84006288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.22	chr9	+	206	1	Intergenic	novelGene_29101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTATACAGGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	83883531	83883737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_83883500_83883700
ES.35727.23	chr9	+	4426	5	ISM	ENSMUSG00000032263.15	ENSMUST00000190166.7	1398	11	57764	0	-29295	0	3prime_fragment	FALSE	canonical	3	616	junction_4	49.2036584005702	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	83888597	84006293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.24	chr9	+	748	5	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	-23335	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	317.255417605437	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83894557	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83894673_83951157_83951245_83972475_83972602_84004286_84004436_84006021
ES.35727.3	chr9	+	3072	3	ISM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-19	167767	-19	-167726	5prime_fragment	FALSE	canonical	3	668	junction_1	14	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAACAAACATACAAAAATC	NA	False	NA	NA	False	NA	NA	NA	83807178	83838525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83807413_83834576_83834655_83835765
ES.35727.4	chr9	+	3081	10	ISM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	-18	0	-18	0	intron_retention	FALSE	canonical	3	595	junction_3	43.2215081346325	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807179	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286
ES.35727.5	chr9	+	1347	9	NIC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	229.690790792752	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807180	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83807413_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.7	chr9	+	3900	10	NIC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	595	junction_3	46.0844635183896	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807191	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ES.35727.8	chr9	+	2359	4	NNC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	0	-165142	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	320.287717876009	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCTACCATATTTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	83807197	83841109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_83807413_83834576_83834655_83835765_83835835_83839112
ES.35727.9	chr9	+	5479	9	NIC	ENSMUSG00000032263.15	novel	1477	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	595	junction_3	44.430950642542	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807198	84006292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286
ES.35728.1	chr9	-	4065	1	Intergenic	novelGene_29100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83812992	83808927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83808900_83813000
ES.35729.1	chr9	-	543	1	Intergenic	novelGene_29102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83923912	83923369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83923400_83923900
ES.3573.1	chr10	-	3636	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-44	-59	-44	59	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATGTGGTATTTATT	NA	False	NA	57	True	CATAAA	-22	NA	91007488	90983373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.10	chr10	-	4208	1	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	54	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	681	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	90987641	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90983400_90987600
ES.3573.11	chr10	-	3226	9	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	262.771020805187	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007443	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001939_91007211
ES.3573.12	chr10	-	3612	8	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	698	junction_3	72.6251207452718	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007427	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.13	chr10	-	3275	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.793026899201	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007433	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90983582_90983827_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.14	chr10	-	3629	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	328.141380249579	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTTGTTGAATACA	NA	False	NA	-4	True	AATAAA	-13	NA	91007427	90983434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90995199_90995315_90999904_91000064_91001804_91001932_91006899
ES.3573.15	chr10	-	8962	7	NIC	ENSMUSG00000019961.18	novel	1854	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	698	junction_3	75.4276695472778	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTTGTTGAATACA	NA	False	NA	-4	True	AATAAA	-13	NA	91007428	90983434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.16	chr10	-	3313	7	FSM	ENSMUSG00000019961.18	ENSMUST00000099355.12	1953	7	-28	-1332	-2	-2	multi-exon	FALSE	canonical	1	5	junction_3	305.633086123432	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTTGTTGAATACA	NA	False	NA	-4	True	AATAAA	-13	NA	91007442	90983434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.18	chr10	-	3926	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-376	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	365.505163699992	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTTGTTGAATACA	NA	False	NA	-4	True	AATAAA	-13	NA	91017553	90983434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90995199_90995315_90999904_91000064_91001804_91001932_91016728
ES.3573.19	chr10	-	3425	9	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_7	252.133366246913	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTTGTTGAATACA	NA	False	NA	-4	True	AATAAA	-13	NA	91007425	90983434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_90999977_91001804_91001932_91006899
ES.3573.2	chr10	-	5909	4	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-2662	0	intron_retention	FALSE	canonical	3	670	junction_3	91.7327034862098	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	9158	False	NA	-2	True	AATAAA	-15	NA	90992218	90983432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90989043_90989139
ES.3573.20	chr10	-	3164	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	100	-1410	56	-135	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACTTGGTCTTTTGTC	NA	False	NA	NA	False	TTTAAA	-6	NA	91007330	90983567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.21	chr10	-	3372	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	17	144	3	-144	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATGTGTACTTGG	NA	False	NA	NA	False	AAAACA	-11	NA	91007427	90983576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.22	chr10	-	2826	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-3	710	-3	340	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAAGTTGCAATTTTAC	NA	False	NA	NA	False	AGTAAA	-33	NA	91007447	90984142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.23	chr10	-	2471	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-12	-617	4	333	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAATCATTAAGTTGCA	NA	False	NA	NA	False	AGTAAA	-26	NA	91007426	90984149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.24	chr10	-	2686	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-5	-827	-5	332	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAAATCATTAAGTTGC	NA	False	NA	NA	False	AGTAAA	-25	NA	91007435	90984150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.25	chr10	-	2204	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	247	1082	189	-32	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTTGGATTTCATTGT	124	False	NA	NA	False	ACTAAA	-16	NA	91007197	90984514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.26	chr10	-	5252	4	ISM	ENSMUSG00000019961.18	ENSMUST00000213262.2	788	5	-3792	-575	-3792	7	intron_retention	FALSE	canonical	3	698	junction_3	82.9337084664613	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGACTTATTCTCTGCT	8028	False	NA	0	True	ATTAAA	-25	NA	90993348	90984970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946
ES.3573.27	chr10	-	4051	5	ISM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	9714	-5	-8160	5	3prime_fragment	FALSE	canonical	3	63	junction_4	314.873784237431	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGACTTATTCTCTG	9605	False	NA	-2	True	ATTAAA	-23	NA	90997716	90984972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609
ES.3573.28	chr10	-	2118	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	-125	1540	-125	5	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGACTTATTCTCTG	NA	False	NA	-2	True	ATTAAA	-23	NA	91007569	90984972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.29	chr10	-	8014	7	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-1	2	intron_retention	FALSE	canonical	3	670	junction_3	85.460842235234	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATGACTTATTCT	NA	False	NA	-5	True	ATTAAA	-20	NA	91007441	90984975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90988601_90988946_90989043_90989139_90989260_90994609_91000064_91001804_91001932_91006899
ES.3573.3	chr10	-	3501	9	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	265.134399880513	904	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007425	90983432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989247_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.31	chr10	-	1907	9	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_7	252.133366246913	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	NA	False	NA	-6	True	ATTAAA	-19	NA	91007449	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_90999977_91001804_91001932_91006899
ES.3573.32	chr10	-	5074	3	ISM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	8464	210	7374	1	3prime_fragment	FALSE	canonical	3	37	junction_2	425	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	8371	False	NA	-6	True	ATTAAA	-19	NA	90998950	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90985621_90987570_90987660_90994609
ES.3573.33	chr10	-	1647	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-15	210	1	1	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	NA	False	NA	-6	True	ATTAAA	-19	NA	91007429	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.34	chr10	-	2100	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	328.141380249579	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	NA	False	NA	-6	True	ATTAAA	-19	NA	91007440	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90995199_90995315_90999904_91000064_91001804_91001932_91006899
ES.3573.35	chr10	-	3147	2	NIC	ENSMUSG00000019961.18	novel	788	5	NA	NA	603	1	intron_retention	FALSE	canonical	3	728	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	NA	False	NA	-6	True	ATTAAA	-19	NA	90988953	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90987660_90988489
ES.3573.36	chr10	-	7051	8	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-182	1	intron_retention	FALSE	canonical	3	670	junction_4	81.3054206592121	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATGACTTATTC	165	False	NA	-6	True	ATTAAA	-19	NA	91007156	90984976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.38	chr10	-	2323	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	296.538549114801	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGATTTATGACTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	91007440	90984978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90998883_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.39	chr10	-	1877	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-24	1	-10	-1	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGATTTATGACTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	91007454	90984978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.40	chr10	-	1758	7	FSM	ENSMUSG00000019961.18	ENSMUST00000099355.12	1953	7	-17	212	-1	-1	multi-exon	FALSE	canonical	1	5	junction_3	305.633086123432	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGATTTATGACTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	91007431	90984978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.41	chr10	-	7175	8	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	670	junction_4	81.1607123212321	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGATTTATGACTTAT	NA	False	NA	-8	True	ATTAAA	-17	NA	91007435	90984978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_91000064_91001804_91001932_91006899
ES.3573.42	chr10	-	5637	10	NNC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-98	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	295.84342705785	891	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGAAAAGATTTATGACTT	249	False	NA	-10	True	ATTAAA	-15	NA	91007072	90984980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90995199_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.44	chr10	-	4162	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	-383	-7	-379	7	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCTCCAGAAACATG	NA	False	NA	-11	True	AATAAA	-23	NA	91007823	90996271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.46	chr10	-	4441	3	FSM	ENSMUSG00000019961.18	ENSMUST00000216501.2	4441	3	2	-2	2	0	multi-exon	FALSE	canonical	3	809	junction_2	36.5	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	False	NA	-18	True	AATAAA	-16	NA	91007428	90996278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_91000064_91001804_91001932_91006899
ES.3573.47	chr10	-	4102	4	NIC	ENSMUSG00000019961.18	novel	3772	4	NA	NA	-422	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	377.933268654078	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	False	NA	-18	True	AATAAA	-16	NA	91017599	90996278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90999224_90999904_91000064_91001804_91001932_91016728
ES.3573.48	chr10	-	3653	4	NNC	ENSMUSG00000019961.18	novel	3772	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	347.835529461203	818	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTTGTGTGGTCTCC	NA	False	NA	-20	True	AATAAA	-14	NA	91007425	90996280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90999224_90999904_90999962_91001804_91001932_91006899
ES.3573.49	chr10	-	5091	2	ISM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	5388	2	4272	0	intron_retention	FALSE	canonical	3	173	junction_1	0	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTTGTGTGGTCTCC	5269	False	NA	-20	True	AATAAA	-14	NA	91002052	90996280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_90999224_90999904
ES.3573.5	chr10	-	3471	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-72	-1545	-58	0	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007502	90983432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.50	chr10	-	3415	4	NNC	ENSMUSG00000019961.18	novel	3772	4	NA	NA	3304	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	381.595189813615	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTTGTGTGGTCTCC	4301	False	NA	-20	True	AATAAA	-14	NA	91003020	90996280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90999224_90999904_91000064_91001804_91002098_91003000
ES.3573.51	chr10	-	6591	2	NNC	ENSMUSG00000019961.18	novel	1213	2	NA	NA	558	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACAGTTTTGTGTGGTCT	1555	False	NA	-22	True	AATAAA	-12	NA	91005766	90996282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_91001623_91004515
ES.3573.52	chr10	-	2806	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	16	950	6	-948	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTTTGTTGTCCACTC	NA	False	NA	NA	False	TATAAA	-16	NA	91007424	90997228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.53	chr10	-	3471	3	FSM	ENSMUSG00000019961.18	ENSMUST00000216501.2	4441	3	19	951	3	-951	multi-exon	FALSE	canonical	3	809	junction_2	36.5	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCCTTTTGTTGTCCA	NA	False	NA	NA	False	TATAAA	-13	NA	91007411	90997231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_91000064_91001804_91001932_91006899
ES.3573.54	chr10	-	2189	4	NNC	ENSMUSG00000019961.18	novel	3772	4	NA	NA	-5	-1489	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_2	343.788048399333	804	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGGAACATTATTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	91007435	90997769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_90999224_90999904_90999977_91001804_91001932_91006899
ES.3573.55	chr10	-	2276	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	5	1491	-5	-1489	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGGAACATTATTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	91007435	90997769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.56	chr10	-	1654	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	-14	2132	-10	1497	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAAGTGTTGTCTCTCAT	NA	False	NA	NA	False	AATACA	-29	NA	91007454	90998410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ES.3573.57	chr10	-	334	1	Intergenic	novelGene_2731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTGTGTTTGAAG	1617	False	NA	NA	False	NA	NA	NA	91005704	91005370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_91005400_91005700
ES.3573.6	chr10	-	3865	9	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	-429	-1	combination_of_known_junctions	FALSE	canonical	3	12	junction_8	258.972458719069	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91017606	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91016728
ES.3573.7	chr10	-	3241	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-66	-1333	-36	-1	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007480	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ES.3573.8	chr10	-	9270	7	NIC	ENSMUSG00000019961.18	novel	1854	8	NA	NA	-387	-1	intron_retention	FALSE	canonical	3	12	junction_6	297.656634769363	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91017564	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90994708_90999904_91000064_91001804_91001932_91016728
ES.3573.9	chr10	-	8849	8	NIC	ENSMUSG00000019961.18	novel	3533	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	670	junction_4	81.3054206592121	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTGTTGAATACAT	NA	False	NA	-3	True	AATAAA	-14	NA	91007411	90983433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90994708_90999904_91000064_91001804_91001932_91006899
ES.35730.1	chr9	-	128	1	Intergenic	novelGene_29103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	83982081	83981953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_83982000_83982100
ES.35731.1	chr9	+	2506	1	Intergenic	novelGene_29104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAGGAGGAGGAGGG	819	False	NA	NA	False	NA	NA	NA	84008312	84010818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_84008300_84010800
ES.35732.1	chr9	-	176	1	Intergenic	novelGene_29105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAGGAGTCCACAT	NA	False	NA	NA	False	NA	NA	NA	84246128	84245952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_84246000_84246100
ES.35733.1	chr9	+	888	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-26	-64	-26	64	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACACATCCTTGGGTGGA	NA	False	NA	NA	False	CATAAA	-35	NA	84306010	84306898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_84306000_84306900
ES.35734.1	chr9	+	321	1	Intergenic	novelGene_29106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATTAATAATTCTT	NA	False	NA	NA	False	NA	NA	NA	85104965	85105286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_85105000_85105300
ES.35735.1	chr9	-	2761	1	ISM	ENSMUSG00000032265.15	ENSMUST00000034802.15	5479	3	3923	2	3923	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTCTGCTCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	85205254	85202493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_85202500_85205300
ES.35736.1	chr9	-	2701	3	FSM	ENSMUSG00000032265.15	ENSMUST00000034802.15	5479	3	-216	2994	8	-2994	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGTGGAGGAAATGCC	NA	False	NA	NA	False	AATAAA	-17	NA	85209393	85205485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_85207287_85208311_85208859_85209040
ES.35736.2	chr9	-	2625	3	NNC	ENSMUSG00000032265.15	novel	5648	3	NA	NA	-6	-3026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	85209407	85205517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85207284_85208311_85208859_85209095
ES.35737.1	chr9	-	148	1	Intergenic	novelGene_29107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	85503550	85503402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_85503400_85503600
ES.35738.1	chr9	+	2052	2	Antisense	novelGene_ENSMUSG00000035941.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAACTCAAACCAGGTTT	NA	False	NA	NA	False	NA	NA	NA	85610036	85612177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_85610638_85610726
ES.35739.1	chr9	+	1029	2	Genic_Genomic	ENSMUSG00000103715.2	novel	1352	1	NA	NA	-113	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTTTATCTGTCTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	85631017	85632482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_85631200_85631635
ES.3574.1	chr10	+	392	1	Intergenic	novelGene_2732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTCTGTCCACTTCTTA	NA	False	NA	NA	False	ATTAAA	-44	NA	91018708	91019100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_91018700_91019100
ES.35740.1	chr9	-	5667	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	-11	-6	-11	6	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCGTGTGTTTGATTTCA	NA	False	NA	-1	True	AATAAA	-22	NA	85631398	85569406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.10	chr9	-	5474	28	FSM	ENSMUSG00000035941.16	ENSMUST00000187521.7	5290	28	0	-184	0	2	multi-exon	FALSE	canonical	2	7	junction_18	46.0379458210114	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTAGCGTGTGTTTGAT	NA	False	NA	-5	True	AATAAA	-18	NA	85631387	85569410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.12	chr9	-	5655	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	47.8010865729119	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTAGCGTGTGTTTGAT	NA	False	NA	-5	True	AATAAA	-18	NA	85631366	85569410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614659_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.15	chr9	-	5516	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	46.3945342268079	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTAGCGTGTGTTTGA	NA	False	NA	-6	True	AATAAA	-17	NA	85631367	85569411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606214_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.17	chr9	-	5693	30	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.4663080620306	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTAGCGTGTGTTTGA	NA	False	NA	-6	True	AATAAA	-17	NA	85631344	85569411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85571518_85571607_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.19	chr9	-	5167	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	61.1572496411788	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTAGCGTGTGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	85631386	85569412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599704_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85625633_85631183
ES.35740.2	chr9	-	5864	30	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	65.5249723206495	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCGTGTGTTTGATTT	NA	False	NA	-3	True	AATAAA	-20	NA	85631349	85569408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619183_85619435_85619520_85619618_85625427_85626113_85631183
ES.35740.20	chr9	-	5585	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	46.9987380421115	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTAGCGTGTGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	85631367	85569412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590181_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.24	chr9	-	5251	27	NIC	ENSMUSG00000035941.16	novel	5290	28	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	48.0207672037863	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTCTAGCGTGTGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	85631345	85569413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.26	chr9	-	5480	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-11	4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_19	38.9746614442496	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCAGTCTGTAGAGCAA	NA	False	NA	-6	True	ATTAAA	-22	NA	85631398	85569590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.31	chr9	-	5325	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.0355616603977	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85631374	85569594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585072_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599698_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606161_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.32	chr9	-	7273	27	NNC	ENSMUSG00000035941.16	novel	5290	28	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_17	47.8637891071351	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85631351	85569594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85606214_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.33	chr9	-	3932	23	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	2540	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	51.9253477170562	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85610748	85569594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590181_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728
ES.35740.35	chr9	-	5251	28	FSM	ENSMUSG00000035941.16	ENSMUST00000187521.7	5290	28	39	0	19	0	multi-exon	FALSE	canonical	2	7	junction_18	46.0379458210114	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85631348	85569594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.36	chr9	-	5707	30	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	60.1487059312841	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85631375	85569594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619183_85619435_85619520_85619618_85625427_85626113_85631183
ES.35740.37	chr9	-	5441	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.7927471869265	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGTGTGTTTCAGT	NA	False	NA	-17	True	ATTAAA	-11	NA	85631374	85569601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602803_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.38	chr9	-	5351	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-9	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.7630738593089	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATGTGTGTTTCAG	NA	False	NA	-18	True	ATTAAA	-10	NA	85631376	85569602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590145_85592445_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.39	chr9	-	5109	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	47.8399222748669	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATGTGTGTTTCAG	NA	False	NA	-18	True	ATTAAA	-10	NA	85631375	85569602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85625774_85631183
ES.35740.40	chr9	-	4772	25	NIC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-3817	0	intron_retention	FALSE	canonical	3	145	junction_18	23.7430911003601	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAAAATGTGT	NA	False	NA	-25	True	ATTAAA	-3	NA	85617105	85569609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_85570568_85572261_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027
ES.35740.42	chr9	-	2096	1	Intergenic	novelGene_29108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATACATTATAAA	NA	False	NA	NA	False	NA	NA	NA	85582500	85580404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_85580400_85582500
ES.35740.43	chr9	-	3433	20	ISM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	39	26248	19	-5440	5prime_fragment	FALSE	canonical	3	145	junction_10	21.8949898770804	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATTACTCGTAAGCTCT	NA	False	NA	NA	False	AATAAA	-8	NA	85631348	85595660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35740.8	chr9	-	5682	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	-8	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	47.8214552437779	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGCGTGTGTTTGATTT	NA	False	NA	-3	True	AATAAA	-20	NA	85631395	85569408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596322_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ES.35741.1	chr9	+	2532	2	FSM	ENSMUSG00000035274.14	ENSMUST00000006559.14	3603	2	15	1056	15	-1056	multi-exon	TRUE	canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGCATGTTGTGTTT	NA	False	NA	-4	True	AATAAA	-9	NA	85724447	85728037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_85724646_85725703
ES.35741.2	chr9	+	2450	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	-19	1050	-19	-1050	multi-exon	FALSE	canonical	3	125	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGTTTAACTTT	NA	False	NA	2	True	AATAAA	-15	NA	85724898	85728043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_85725009_85725703
ES.35741.3	chr9	+	3495	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	1	-15	1	15	multi-exon	FALSE	canonical	3	125	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTTTGCAGATGACTG	NA	False	NA	NA	False	AATAAA	-45	NA	85724918	85729108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_85725009_85725703
ES.35741.4	chr9	+	2420	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	-43	-1056	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGCATGTTGTGTTT	NA	False	NA	-4	True	AATAAA	-9	NA	85725370	85728037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_85725457_85725703
ES.35741.5	chr9	+	2490	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	-22	-2059	-22	-1056	multi-exon	FALSE	canonical	3	15	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGCATGTTGTGTTT	NA	False	NA	-4	True	AATAAA	-9	NA	85725391	85728037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_85725548_85725703
ES.35741.6	chr9	+	3450	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	-5	12	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGCTCTTTGCAGATGA	NA	False	NA	NA	False	AATAAA	-42	NA	85725408	85729105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_85725457_85725703
ES.35741.7	chr9	+	3266	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	1	-2858	1	-257	multi-exon	FALSE	canonical	3	15	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGTCATCCGATACTC	NA	False	NA	NA	False	AATAAA	-39	NA	85725414	85728836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_85725548_85725703
ES.35742.1	chr9	-	3188	1	Antisense	novelGene_ENSMUSG00000035274.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCAGCTTCCGTTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	85730825	85727637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_85727600_85730800
ES.35742.2	chr9	-	2905	1	Antisense	novelGene_ENSMUSG00000035274.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGAAAAATCTCAGGTCA	NA	False	NA	NA	False	NA	NA	NA	85730826	85727921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_85727900_85730800
ES.35743.1	chr9	+	279	2	Intergenic	novelGene_29109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCAGCTTTCATTC	1340	False	NA	NA	False	NA	NA	NA	85846939	85847294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_85847126_85847201
ES.35744.1	chr9	-	1770	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	17	3	17	-3	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTTCTTTTGTTCTT	NA	False	NA	-3	True	ATTAAA	-23	NA	86346986	86189361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ES.35744.2	chr9	-	1978	10	NNC	ENSMUSG00000032415.15	novel	1790	10	NA	NA	37	-7958	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.94427190999916	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCATTGTCACCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	86346966	86197752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86198549_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ES.35744.3	chr9	-	157	1	Intergenic	novelGene_29110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86258263	86258106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_86258100_86258300
ES.35745.1	chr9	+	7023	33	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	-3	-674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5.45686207907072	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCGCCTAAGTATCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	86349219	86430496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385044_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222
ES.35745.10	chr9	+	8490	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	7	-484	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	4.02423215588321	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGTGGTCTTTCTCC	NA	False	NA	NA	False	TATAAA	-16	NA	86349273	86437373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.11	chr9	+	8845	37	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	15	-154	intron_retention	FALSE	canonical	0	0	junction_13	5.28179671543783	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGTCTGAATGTGGCC	NA	False	NA	NA	False	TTTAAA	-16	NA	86349281	86436524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86392667_86392805_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.12	chr9	+	7840	38	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.10546192005119	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGTCTCAAGCCTC	NA	False	NA	14	True	AATACA	-19	NA	86349283	86436679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86361677_86361732_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.13	chr9	+	7885	38	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.35517199128519	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTGGTCTCAAGCCT	NA	False	NA	13	True	AATACA	-18	NA	86349317	86436678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86392667_86392805_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.14	chr9	+	5925	23	NIC	ENSMUSG00000034973.17	novel	8933	37	NA	NA	-8450	2	intron_retention	FALSE	canonical	3	11	junction_3	3.63551126373724	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGTCTCAAGCCTCA	NA	False	NA	15	True	AATACA	-20	NA	86394743	86436680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.15	chr9	+	5693	23	NIC	ENSMUSG00000034973.17	novel	8933	37	NA	NA	-8426	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	5.18998558892249	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGCCTCATTTAATTG	NA	False	NA	23	True	AATACA	-28	NA	86394767	86436688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.16	chr9	+	3497	18	NIC	ENSMUSG00000034973.17	novel	8933	37	NA	NA	-535	-202	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	5.13890109831566	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGCATTATTCAGGTTG	NA	False	NA	NA	False	NA	NA	NA	86402658	86436476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.17	chr9	+	1710	1	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	-580	7621	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAATGCAGTTATATT	NA	False	NA	NA	False	NA	NA	NA	86413049	86414759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86413000_86414800
ES.35745.18	chr9	+	4058	8	NNC	ENSMUSG00000034973.17	novel	2164	14	NA	NA	-388	-99	intron_retention	FALSE	canonical	0	0	junction_6	6.13787173112595	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGTGCCTACAAGGTC	NA	False	NA	-86	True	AATATA	-17	NA	86424485	86436579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86424522_86424787_86424938_86425061_86425124_86427293_86430360_86430853_86430910_86432055_86432103_86433698_86433829_86436068
ES.35745.19	chr9	+	4704	1	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	303	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTGGTCTCAAGC	NA	False	NA	11	True	AATACA	-16	NA	86431972	86436676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86432000_86436700
ES.35745.2	chr9	+	7839	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	4.02423215588321	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTCAAGCCTCATTT	NA	False	NA	18	True	AATACA	-23	NA	86349234	86436683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.3	chr9	+	8017	39	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	6.42256237643702	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCTTGGTCTCAAGC	NA	False	NA	11	True	AATACA	-16	NA	86349234	86436676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86392667_86392805_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ES.35745.4	chr9	+	7285	37	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	4.89984567658217	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTGGTCTCAAGCCT	NA	False	NA	13	True	AATACA	-18	NA	86349243	86436678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86394693_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.6	chr9	+	7912	37	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	14	-137	intron_retention	FALSE	canonical	0	0	junction_6	5.55354130151693	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGAATCAAGTTTAAATA	NA	False	NA	NA	False	TTTAAA	-33	NA	86349245	86436541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86379331_86379479_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.7	chr9	+	7706	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	-3	-102	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	4.02423215588321	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGATGGTGCCTACAAG	NA	False	NA	-89	True	AATATA	-14	NA	86349260	86436576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
ES.35745.8	chr9	+	7858	38	NNC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	5.54653597830718	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTGGTCTCAAGCCT	NA	False	NA	13	True	AATACA	-18	NA	86349261	86436678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ES.35745.9	chr9	+	6370	22	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	7	0	intron_retention	FALSE	canonical	2	9	junction_9	4.14586644946265	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAATTGTATACCTACA	NA	False	NA	NA	False	ATTAAA	-20	NA	86349273	86407138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394610_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276
ES.35746.1	chr9	-	2268	1	Intergenic	novelGene_29111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	86413132	86410864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_86410900_86413100
ES.35747.1	chr9	-	10336	13	FSM	ENSMUSG00000056131.14_ENSMUSG00000103731.2	ENSMUST00000070064.11	2666	13	25	-7695	-9	0	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTACAGCTACTGTAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	86453855	86428734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.10	chr9	-	2737	11	NIC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	14	-1	intron_retention	FALSE	canonical	2	4	junction_6	145.264448506852	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86453866	86437054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86441567_86443873_86443958_86444588_86444747_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.11	chr9	-	2073	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-32	625	-17	-1	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86453912	86437054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.12	chr9	-	2286	14	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	173.196847341382	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86453890	86437054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86452640_86452876_86453782
ES.35747.14	chr9	-	2902	2	ISM	ENSMUSG00000056131.14	ENSMUST00000190924.2	760	3	-751	-254	-751	-1	intron_retention	FALSE	canonical	3	487	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86440744	86437054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_86437457_86438244
ES.35747.16	chr9	-	1944	13	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	136.932744034759	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCAGCCCCTTTCGAT	NA	False	NA	-10	True	ATTAAA	-12	NA	86453874	86437061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444645_86446711_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.17	chr9	-	5191	7	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	5725	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	175.309963588306	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCAGCCCCTTTCGAT	NA	False	NA	-10	True	ATTAAA	-12	NA	86448121	86437061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86439679_86440447_86441567_86443873_86443958_86444588_86445008_86445656_86446926_86447650
ES.35747.2	chr9	-	6267	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-6	-3595	-5	3595	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGGAGCTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	86453886	86432834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.20	chr9	-	2794	12	NIC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	6	-11	intron_retention	FALSE	canonical	3	372	junction_6	44.9309847257964	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453874	86437064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86437457_86438244_86438419_86439555_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.22	chr9	-	2018	13	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	138.196016183133	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTTGCAGCCCCTTTC	NA	False	NA	-13	True	ATTAAA	-9	NA	86453873	86437064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449624_86451263_86451449_86452254_86452461_86453782
ES.35747.23	chr9	-	1902	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-4	768	-3	111	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATCTTAGACTTGGGA	NA	False	NA	NA	False	TTTAAA	-29	NA	86453884	86437197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.24	chr9	-	3054	11	NNC	ENSMUSG00000056131.14	novel	2116	12	NA	NA	8	10	intron_retention	FALSE	canonical	1	7	junction_9	141.650132368452	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGTGATGTAAATTC	NA	False	NA	NA	False	GATAAA	-22	NA	86453872	86437723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86438419_86439555_86439679_86440447_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451445_86452254_86452461_86453782
ES.35747.3	chr9	-	5088	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	9	-2431	9	2431	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATTTAGTAAATGAT	NA	False	NA	NA	False	AATAAA	-25	NA	86453871	86433998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.4	chr9	-	3507	6	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	9930	-1893	-3957	1893	3prime_fragment	FALSE	canonical	3	447	junction_3	39.3263270596175	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTATTATGTGTTGA	NA	False	NA	NA	False	GATAAA	-21	NA	86443950	86434536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873
ES.35747.5	chr9	-	3989	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	-34	-1289	-19	1289	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAAGCTCCTAATTGC	NA	False	NA	NA	False	NA	NA	NA	86453914	86435140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.6	chr9	-	6341	11	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	-17	667	intron_retention	FALSE	non_canonical	0	0	junction_5	193.134797486108	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACTTTTTATATTCC	NA	False	NA	NA	False	AATACA	-14	NA	86453912	86435762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86441567_86443873_86443969_86444588_86445008_86445656_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.7	chr9	-	2612	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	32	22	-2	-22	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAACTATAC	NA	False	NA	NA	False	AATACA	-44	NA	86453848	86436451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.8	chr9	-	2509	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	5	152	5	-152	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTATGAGCCACCTATA	NA	False	NA	NA	False	AATATA	-19	NA	86453875	86436581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ES.35747.9	chr9	-	2039	13	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_11	134.027023601793	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	False	NA	-3	True	ATTAAA	-19	NA	86453870	86437054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452246_86452461_86453782
ES.35748.1	chr9	+	1234	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	-15	-165	-15	-1	multi-exon	FALSE	canonical	3	38	junction_1	7	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTGTCTCAAGTCCA	NA	False	NA	5	True	AATAAA	-18	NA	86454028	86456951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86454111_86454889_86455117_86456026
ES.35748.3	chr9	+	1379	3	FSM	ENSMUSG00000032417.11	ENSMUST00000034988.10	1355	3	-25	1	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	22.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTGTCTCAAGTCCA	NA	False	NA	5	True	AATAAA	-18	NA	86454043	86456951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86454271_86454889_86455117_86456026
ES.35748.4	chr9	+	1099	3	NNC	ENSMUSG00000032417.11	novel	1054	3	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAACTTGTCTCAAGTC	NA	False	NA	3	True	AATAAA	-16	NA	86454056	86456949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86454111_86454994_86455117_86456026
ES.35748.5	chr9	+	2103	2	ISM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	24	-163	-1	-3	intron_retention	FALSE	canonical	3	38	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAACTTGTCTCAAGTC	NA	False	NA	3	True	AATAAA	-16	NA	86454067	86456949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_86454111_86454889
ES.35749.1	chr9	+	176	1	Intergenic	novelGene_29112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGATATATAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	86532059	86532235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86532100_86532200
ES.3575.1	chr10	+	191	1	Intergenic	novelGene_2733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCACAAAAGTGAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	91020852	91021043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_91020900_91021000
ES.35750.1	chr9	+	133	1	Intergenic	novelGene_29114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	86544020	86544153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86544000_86544200
ES.35751.1	chr9	+	167	1	Intergenic	novelGene_29115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGTAAAGAA	6326	False	NA	NA	False	NA	NA	NA	86551588	86551755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86551600_86551800
ES.35752.1	chr9	+	1347	3	FSM	ENSMUSG00000087466.4	ENSMUST00000150367.4	1825	3	24	454	24	-454	multi-exon	FALSE	canonical	3	6	junction_2	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACGTTGTAAAAGTGTT	5543	False	NA	NA	False	ATTAAA	-44	NA	86577536	86582852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86577756_86581135_86581202_86581790
ES.35753.1	chr9	-	4040	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	34	-786	34	786	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTGTTTGGTCAAGTT	9644	False	NA	NA	False	NA	NA	NA	86577972	86462637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.10	chr9	-	1803	3	NNC	ENSMUSG00000032418.16	novel	1055	8	NA	NA	31038	-6	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	172.5	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATACCGTAAATGTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	86469719	86463429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86469546
ES.35753.11	chr9	-	2255	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	8	1025	8	290	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGCCTACAGTTCTT	9618	False	NA	NA	False	AATAAA	-24	NA	86577998	86464448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.12	chr9	-	2162	14	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	43	290	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	90.5871054214619	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGCCTACAGTTCTT	9653	False	NA	NA	False	AATAAA	-24	NA	86577963	86464448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480880_86493965_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.13	chr9	-	2100	13	NIC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	53	290	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	95.1773198940915	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATGCCTACAGTTCTT	9663	False	NA	NA	False	AATAAA	-24	NA	86577953	86464448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.15	chr9	-	2047	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	43	1198	43	117	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTTTTGTTTCACTTA	9653	False	NA	NA	False	GATAAA	-20	NA	86577963	86464621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.16	chr9	-	1975	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	1	1312	1	3	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGGTCAGAATCTTTT	9611	False	NA	NA	False	AGTAAA	-21	NA	86578005	86464735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.17	chr9	-	1623	12	NIC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	64	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	99.3101827442393	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTTTAAGGGTCAGAAT	9674	False	NA	NA	False	AGTAAA	-16	NA	86577942	86464740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86577725
ES.35753.18	chr9	-	1875	11	ISM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	52	14236	52	-12921	5prime_fragment	FALSE	canonical	3	250	junction_2	28.1247222208505	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTTGTACTGATA	9662	False	NA	NA	False	AATAAA	-12	NA	86577954	86477659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.19	chr9	-	3917	9	ISM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	65	27729	65	4441	5prime_fragment	FALSE	canonical	3	297	junction_3	20.5057156666135	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAACTAGGTTTGGAG	9675	False	NA	NA	False	NA	NA	NA	86577941	86491152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.2	chr9	-	3977	14	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	87	782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	91.6972765819377	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGAAGTGTTTGGTCA	9697	False	NA	NA	False	NA	NA	NA	86577919	86462641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495686_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.20	chr9	-	6748	1	NIC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	2857	4441	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAACTAGGTTTGGAG	NA	False	NA	NA	False	NA	NA	NA	86497900	86491152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86491200_86497900
ES.35753.21	chr9	-	175	1	Intergenic	novelGene_29113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCTTCATATTTAA	NA	False	NA	NA	False	NA	NA	NA	86535285	86535110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_86535100_86535300
ES.35753.3	chr9	-	3610	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	35	-357	35	357	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCTTATTCCAGTGTG	9645	False	NA	NA	False	TATAAA	-18	NA	86577971	86463066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.4	chr9	-	3378	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	36	-126	36	126	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTATGTGTGTCTG	9646	False	NA	NA	False	TTTAAA	-26	NA	86577970	86463297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.5	chr9	-	3386	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	-96	-2	-96	2	multi-exon	FALSE	canonical	3	250	junction_5	30.9913139195733	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTAAATGTCATTTTTTTC	9514	False	NA	NA	False	ATTAAA	-22	NA	86578102	86463421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.6	chr9	-	2921	13	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	140	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	94.4523321869585	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACCGTAAATGTCATTT	9750	False	NA	NA	False	ATTAAA	-17	NA	86577866	86463426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86493962_86501845_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35753.8	chr9	-	2664	10	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	-29237	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	107.586428076095	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACCGTAAATGTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	86530027	86463428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86529843
ES.35753.9	chr9	-	3151	13	NNC	ENSMUSG00000032418.16	novel	3288	14	NA	NA	35	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	124.676553752322	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATACCGTAAATGTCAT	9645	False	NA	NA	False	ATTAAA	-15	NA	86577971	86463428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494033_86495593_86495692_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ES.35754.1	chr9	+	2629	2	Intergenic	novelGene_29116	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAACAATAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	86607335	86611164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86607367_86608566
ES.35755.1	chr9	+	3568	3	NNC	ENSMUSG00000033491.14	novel	3211	3	NA	NA	-720	-742	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTTGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	86624981	86639583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86625010_86625196_86626364_86637210
ES.35755.2	chr9	+	3820	3	NNC	ENSMUSG00000033491.14	novel	3444	2	NA	NA	-540	0	intron_retention	FALSE	canonical	0	0	junction_1	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACTGTGTTTGTATA	NA	False	NA	4	True	AATAAA	-19	NA	86625161	86640496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86625413_86625576_86625860_86637210
ES.35755.3	chr9	+	2713	3	NNC	ENSMUSG00000033491.14	novel	3211	3	NA	NA	-453	-744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	86625248	86639581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86625413_86625681_86625860_86637210
ES.35755.4	chr9	+	1745	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	-28	1727	-28	-1556	multi-exon	FALSE	canonical	3	21	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTGATGTGACTTCT	NA	False	NA	NA	False	TTTAAA	-11	NA	86625673	86638769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86625860_86637210
ES.35755.5	chr9	+	2767	3	NNC	ENSMUSG00000033491.14	novel	3211	3	NA	NA	-12	-744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	86625689	86639581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86625860_86626137_86626364_86637210
ES.35756.1	chr9	+	155	1	Intergenic	novelGene_29117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	5168	False	NA	NA	False	NA	NA	NA	86748832	86748987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86748800_86749000
ES.35757.1	chr9	-	2196	8	NIC	ENSMUSG00000033419.17	novel	4318	28	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	8.43220260764212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTAATCTTTCTGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	86680769	86647977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86680590
ES.35757.10	chr9	-	3641	1	FSM	ENSMUSG00000103891.2	ENSMUST00000192170.2	2309	1	-1665	333	-1665	-333	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	86670573	86666932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86666900_86670600
ES.35757.2	chr9	-	4206	26	NIC	ENSMUSG00000033419.17	novel	4318	28	NA	NA	-55	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	6.56097553722006	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTAATCTTTCTGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	86762762	86647978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762524
ES.35757.3	chr9	-	3390	20	FSM	ENSMUSG00000033419.17	ENSMUST00000074501.12	2577	20	-64	-749	-29	4	multi-exon	FALSE	canonical	1	1	junction_12	6.69145897907908	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACGTAATCTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	86762531	86647981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762313
ES.35757.4	chr9	-	3469	21	NIC	ENSMUSG00000033419.17	novel	4336	30	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.80147042925278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACGTAATCTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	86762507	86647981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762313
ES.35757.6	chr9	-	3407	19	NNC	ENSMUSG00000033419.17	novel	2577	20	NA	NA	-55	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	7.17935999073338	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACGTAATCTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	86762762	86647981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86686507_86686621_86688521_86688644_86697469_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762524
ES.35757.7	chr9	-	3279	19	NIC	ENSMUSG00000033419.17	novel	2577	20	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	6.85475414008319	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCAAACGTAATCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	86762508	86647985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86655571_86655677_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762313
ES.35757.8	chr9	-	2754	13	NIC	ENSMUSG00000033419.17	novel	4336	30	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.41460370757623	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGCAAACGTAATC	NA	False	NA	NA	False	AATAAA	-12	NA	86680726	86647988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590
ES.35757.9	chr9	-	3675	13	NIC	ENSMUSG00000033419.17	novel	4318	28	NA	NA	4279	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.48650890138774	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAAATGCAAACGTAA	NA	False	NA	NA	False	AATAAA	-10	NA	86676473	86647990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657644_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409
ES.35758.1	chr9	+	2323	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	-6	327	-6	66	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTTTTTTGAGTCT	NA	False	NA	77	True	AATACA	-28	NA	86904060	86959500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.11	chr9	+	2232	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	36	50	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	236.300915040504	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGAGTTTTATTTACAT	NA	False	NA	61	True	AATACA	-12	NA	86904102	86959484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.13	chr9	+	2017	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-33	-8	combination_of_known_splicesites	FALSE	canonical	1	7	junction_10	253.216678736873	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTACTCCCTGTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	86904106	86959426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86931154_86931278_86937817_86937959_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.15	chr9	+	1931	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-30	-112	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGATGGTGTATGTCCT	NA	False	NA	NA	False	ATTAAA	-25	NA	86904109	86959322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
ES.35758.16	chr9	+	1668	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-30	-375	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACTTCTTGGTTTAAT	NA	False	NA	10	True	AATGAA	-19	NA	86904109	86959059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
ES.35758.17	chr9	+	1674	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-29	-377	combination_of_known_splicesites	FALSE	canonical	3	62	junction_8	234.467696264786	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTAACTTCTTGGTTTA	NA	False	NA	8	True	AATGAA	-17	NA	86904110	86959057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.18	chr9	+	2372	17	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-26	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.417616980806	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTACTCCCTGTGGTG	NA	False	NA	3	True	AATAAA	-14	NA	86904113	86959426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86921760_86921937_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.19	chr9	+	2241	16	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	229.727800281599	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGTGGTGGACGTGT	NA	False	NA	10	True	AATAAA	-21	NA	86904114	86959433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924793_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.2	chr9	+	2145	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	-5	504	-5	-111	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGGTGTATGTCCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	86904061	86959323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.20	chr9	+	4468	14	ISM	ENSMUSG00000032872.17	ENSMUST00000174724.8	2733	16	-25	5813	-25	320	5prime_fragment	FALSE	canonical	3	203	junction_12	178.997041395668	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATTGCTTGAACTCTT	NA	False	NA	NA	False	AAAAAG	-4	NA	86904114	86944488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417
ES.35758.21	chr9	+	5444	15	NNC	ENSMUSG00000032872.17	novel	2733	16	NA	NA	-24	2381	intron_retention	FALSE	canonical	0	0	junction_6	229.979102866113	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATACAAGGACAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	86904115	86952682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923325_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701
ES.35758.22	chr9	+	1891	13	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_9	252.932838582366	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCTGTGGTGGACGTG	NA	False	NA	9	True	AATAAA	-20	NA	86904115	86959432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86937817_86937959_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.23	chr9	+	4486	17	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-23	1716	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.417616980806	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCTGAGTTGACCTCT	NA	False	NA	NA	False	NA	NA	NA	86904116	86961543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86921760_86921937_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.24	chr9	+	2253	15	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-23	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	233.27500850249	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTTATTTACATACTG	NA	False	NA	65	True	AATACA	-16	NA	86904116	86959488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914531_86922422_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.28	chr9	+	2581	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	56	7	-17	-7	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCAGATTGGGACTAGG	NA	False	NA	NA	False	AATAAA	-20	NA	86904122	86959820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.29	chr9	+	2049	14	ISM	ENSMUSG00000032872.17	ENSMUST00000174724.8	2733	16	-17	8224	-17	-2091	5prime_fragment	FALSE	canonical	3	203	junction_12	178.997041395668	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGCCCTCTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	86904122	86942077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417
ES.35758.3	chr9	+	1852	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	28	764	28	-371	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGGTTTAATTTTG	NA	False	NA	14	True	AATGAA	-23	NA	86904094	86959063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.30	chr9	+	2040	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	1	7	junction_11	187.642422099664	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCTGTGGTGGACGTG	NA	False	NA	9	True	AATAAA	-20	NA	86904122	86959432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.31	chr9	+	3302	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	56	-714	-17	714	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATATCTCTTCTTTGCTCC	NA	False	NA	NA	False	AAAAAG	-14	NA	86904122	86960541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.32	chr9	+	2219	16	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	230.207404070523	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGTGGTGGACGTGT	NA	False	NA	10	True	AATAAA	-21	NA	86904124	86959433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923278_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.33	chr9	+	2179	16	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	228.864404299916	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCTGTGGTGGACGTG	NA	False	NA	9	True	AATAAA	-20	NA	86904126	86959432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931264_86937813_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.35	chr9	+	1739	12	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	276.181189777249	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTTTACTCCCTGTGG	NA	False	NA	1	True	AATAAA	-12	NA	86904128	86959424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86931166_86931285_86940991_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.36	chr9	+	1767	15	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-7	-375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	238.023022381604	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACTTCTTGGTTTAAT	NA	False	NA	10	True	AATGAA	-19	NA	86904132	86959059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924917_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.37	chr9	+	2176	17	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	1	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.426162299763	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATTTACATACTGTT	NA	False	NA	67	True	AATACA	-18	NA	86904140	86959490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904210_86904266_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.38	chr9	+	2212	17	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	254.321516183256	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGGACGTGTGG	NA	False	NA	12	True	AATAAA	-23	NA	86904147	86959435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86949192_86949234_86958880
ES.35758.39	chr9	+	1862	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	-63	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	235.230668611942	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGTGGTGGACGTGT	NA	False	NA	10	True	AATAAA	-21	NA	86909060	86959433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86948701_86948867_86958880
ES.35758.4	chr9	+	2121	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	31	66	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTTTTTTGAGTCT	NA	False	NA	77	True	AATACA	-28	NA	86904097	86959500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
ES.35758.40	chr9	+	130	1	Intergenic	novelGene_29118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86929750	86929880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_86929800_86929900
ES.35758.41	chr9	+	3630	5	ISM	ENSMUSG00000032872.17	ENSMUST00000174043.8	3832	13	22030	-310	-9838	310	3prime_fragment	FALSE	canonical	3	203	junction_3	237.809140909259	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAAGGCTTATTGC	NA	False	NA	NA	False	NA	NA	NA	86931153	86944478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417
ES.35758.42	chr9	+	3163	1	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	66	52	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATACACGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	86941057	86944220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86941100_86944200
ES.35758.43	chr9	+	5192	1	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	6499	2381	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATACAAGGACAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	86947490	86952682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86947500_86952700
ES.35758.5	chr9	+	2057	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	32	-6	combination_of_known_splicesites	FALSE	canonical	3	62	junction_8	234.467696264786	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTCCCTGTGGTGGA	NA	False	NA	5	True	AATAAA	-16	NA	86904098	86959428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35758.6	chr9	+	6896	12	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	32	320	intron_retention	FALSE	canonical	3	203	junction_10	191.408394679332	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATTGCTTGAACTCTT	NA	False	NA	NA	False	AAAAAG	-4	NA	86904098	86944488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417
ES.35758.7	chr9	+	2215	15	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	233.27500850249	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTGTGGTGGACGTGT	NA	False	NA	10	True	AATAAA	-21	NA	86904099	86959433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914540_86922431_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ES.35759.1	chr9	+	3614	2	Intergenic	novelGene_29119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTCATACAGATTTTGA	NA	False	NA	NA	False	NA	NA	NA	87072838	87165542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_87075208_87164297
ES.3576.1	chr10	-	183	1	Intergenic	novelGene_2734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAGTGCAACCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	91053992	91053809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_91053800_91054000
ES.35760.1	chr9	-	4549	27	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5675330015579	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGGAGTTTTGTGTTT	NA	False	NA	NA	False	AATACA	-16	NA	87137350	87071631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87072081_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.10	chr9	-	4198	25	NIC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	1238	-2953	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	14.7739917873719	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTCCATGACGTCAG	NA	False	NA	-6	True	ATTAAA	-14	NA	87136103	87074582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984
ES.35760.11	chr9	-	4318	26	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	3	-2953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.9143754853286	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTCCATGACGTCAG	NA	False	NA	-6	True	ATTAAA	-14	NA	87137338	87074582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114202_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.13	chr9	-	4330	26	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	0	-2953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.659046063505	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTTCCATGACGTCAG	NA	False	NA	-6	True	ATTAAA	-14	NA	87137341	87074582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099192_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.17	chr9	-	4129	25	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	1238	-3014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	18.557296782907	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGAGAGAACATACATG	NA	False	NA	-67	True	AATAAA	-13	NA	87136103	87074643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104092_87104228_87107731_87107994_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984
ES.35760.18	chr9	-	2281	1	Intergenic	novelGene_29120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAAAGTGATTTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87080313	87078032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_87078000_87080300
ES.35760.19	chr9	-	4020	25	ISM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	229	10359	-19	4079	5prime_fragment	FALSE	canonical	3	45	junction_12	9.23074196488138	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTTATGTTCATATTT	NA	False	NA	NA	False	AATAAA	-13	NA	87137360	87081988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.2	chr9	-	7875	26	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	18.4375269491328	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGGAGTTTTGTGTTT	NA	False	NA	NA	False	AATACA	-16	NA	87137340	87071631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87131112_87135984_87136102_87137315
ES.35760.20	chr9	-	3767	6	ISM	ENSMUSG00000056919.10	ENSMUST00000144137.2	3131	12	-10	15466	-10	-15466	5prime_fragment	FALSE	canonical	3	55	junction_2	7.17216843081644	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTATGATTTACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	87137351	87123239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.21	chr9	-	1299	6	ISM	ENSMUSG00000056919.10	ENSMUST00000144137.2	3131	12	-39	17963	-39	-17963	5prime_fragment	FALSE	canonical	3	55	junction_2	7.17216843081644	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATCTAGCTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	87137380	87125736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.3	chr9	-	7475	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	206	4	-42	-4	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTAGGAGTTTTGTGT	NA	False	NA	NA	False	AATACA	-14	NA	87137383	87071633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.5	chr9	-	6879	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	248	558	0	-558	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGTTTATTTTATAATCC	NA	False	NA	NA	False	AATAAA	-17	NA	87137341	87072187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.6	chr9	-	4849	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	23	2813	23	-2813	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCAGCTCTTTCTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	87137566	87074442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35760.7	chr9	-	3526	18	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	-4088	-2820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.3952748397194	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCGGAAATCAGCTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	87114099	87074449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099189_87100557_87100671_87102503_87102645_87103150_87103379_87104092_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031
ES.35760.8	chr9	-	3430	12	NNC	ENSMUSG00000056919.10	novel	7685	27	NA	NA	7406	-2822	intron_retention	FALSE	canonical	0	0	junction_3	25.9404913390069	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACCGGAAATCAGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	87102605	87074451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_87074976_87075625_87075761_87080244_87080446_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503
ES.35760.9	chr9	-	4758	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	-11	2938	-11	-2938	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAAGACTGTGACTAGC	NA	False	NA	9	True	ATTAAA	-29	NA	87137600	87074567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ES.35761.1	chr9	+	181	1	Intergenic	novelGene_29121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	87526786	87526967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_87526800_87527000
ES.35762.1	chr9	-	4274	8	FSM	ENSMUSG00000032419.9	ENSMUST00000034991.8	4679	8	407	-2	-356	2	multi-exon	FALSE	canonical	0	0	junction_3	1.29362644830535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTCTTGGAGTGTAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	87612906	87584850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_87587999_87589819_87589915_87595550_87595616_87597575_87597744_87606354_87606527_87609416_87609519_87611513_87611719_87612587
ES.35762.2	chr9	-	3821	1	Genic_Genomic	ENSMUSG00000032419.9	novel	NA	NA	NA	NA	23878	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTCTTGGAGTGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	87588672	87584851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_87584900_87588700
ES.35763.1	chr9	-	175	1	Intergenic	novelGene_29122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	87627594	87627419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_87627400_87627600
ES.35764.1	chr9	-	159	1	Intergenic	novelGene_29123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87988063	87987904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_87987900_87988100
ES.35765.1	chr9	+	3564	9	FSM	ENSMUSG00000032420.9	ENSMUST00000034992.8	3995	9	426	5	5	-5	multi-exon	FALSE	canonical	0	0	junction_1	0.695970545353753	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGTCTTTGGTCTTA	NA	False	NA	NA	False	AATAAA	-13	NA	88209675	88254140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_88210084_88234315_88234539_88237639_88237829_88245488_88245687_88246720_88246876_88248414_88248521_88249283_88249434_88251098_88251300_88252206
ES.35765.2	chr9	+	155	1	Intergenic	novelGene_29124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAAAAAATCTT	NA	False	NA	NA	False	NA	NA	NA	88231572	88231727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88231600_88231700
ES.35766.1	chr9	-	3706	1	Intergenic	novelGene_29125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88244982	88241276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88241300_88245000
ES.35767.1	chr9	+	571	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	-34	-56	-34	56	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAATTATAAGCTACA	NA	False	NA	NA	False	NA	NA	NA	88272855	88273426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_88272900_88273400
ES.35768.1	chr9	+	3262	1	Antisense	novelGene_ENSMUSG00000032422.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTAACTAAGAAAGTTAA	7890	False	NA	NA	False	AGTAAA	-23	NA	88281481	88284743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88281500_88284700
ES.35769.1	chr9	+	4819	1	Antisense	novelGene_ENSMUSG00000092541.8_AS_novelGene_ENSMUSG00000032422.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88304573	88309392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88304600_88309400
ES.3577.1	chr10	+	220	1	Intergenic	novelGene_2735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATAAAAAAGGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	91066567	91066787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_91066600_91066800
ES.35770.1	chr9	+	6556	1	Intergenic	novelGene_29126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGGAGGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	88310334	88316890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88310300_88316900
ES.35771.1	chr9	+	2957	2	Antisense	novelGene_ENSMUSG00000032423.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	9607	False	NA	NA	False	AAAACA	-20	NA	88337254	88340725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88339111_88339624
ES.35772.1	chr9	-	3325	28	FSM	ENSMUSG00000032422.19	ENSMUST00000239462.2	3112	28	-213	0	-206	0	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTACTGTCTTGA	NA	False	NA	1	True	AATAAA	-43	NA	88321217	88258799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.10	chr9	-	5980	11	NIC	ENSMUSG00000032422.19	novel	1765	13	NA	NA	57	-1	intron_retention	FALSE	canonical	3	163	junction_5	19.2727787306346	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCTTTTGTATTTACTG	NA	False	NA	-5	True	AATAAA	-37	NA	88280617	88258805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88258993_88261562_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419
ES.35772.102	chr9	-	3535	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	326.788019551241	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATAAATGTGTGTTA	NA	False	NA	41	True	AATAAA	-23	NA	88364202	88334685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88355223_88355343_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.103	chr9	-	3603	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATAAATGTGTGTTA	NA	False	NA	41	True	AATAAA	-23	NA	88364247	88334685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.105	chr9	-	4965	11	NIC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	723	junction_1	70.6877641462792	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGTCATTAATATAAAT	NA	False	NA	33	True	AATAAA	-15	NA	88364272	88334693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.106	chr9	-	3573	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	441	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	265.868823679947	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAGGCGAGTGTAACT	NA	False	NA	-16	True	AATAAA	-17	NA	88363743	88334742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88363435
ES.35772.11	chr9	-	3018	28	NIC	ENSMUSG00000032422.19	novel	3082	29	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	64.5056754662141	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCTTTTGTATTTACTG	NA	False	NA	-5	True	AATAAA	-37	NA	88320973	88258805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.111	chr9	-	3714	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	259.211464509835	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGGAGGCGAGTGTAA	NA	False	NA	-18	True	AATAAA	-15	NA	88364632	88334744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108_88364277_88364349
ES.35772.112	chr9	-	3245	11	FSM	ENSMUSG00000032423.13	ENSMUST00000172828.8	1925	11	-74	-1246	25	-3	multi-exon	FALSE	canonical	0	0	junction_7	353.000906514417	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGGAGGCGAGTGTAA	NA	False	NA	-18	True	AATAAA	-15	NA	88364276	88334744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359152_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.113	chr9	-	3386	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	267.790623775027	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGGAGGCGAGTGTAA	NA	False	NA	-18	True	AATAAA	-15	NA	88364621	88334744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364498
ES.35772.114	chr9	-	5091	7	NNC	ENSMUSG00000032423.13	novel	6257	11	NA	NA	5068	-3	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	302.653634080647	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGGAGGCGAGTGTAA	NA	False	NA	-18	True	AATAAA	-15	NA	88357729	88334744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88355223
ES.35772.116	chr9	-	3365	12	NIC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	328.565225545882	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCTGGAGGCGAGTGT	NA	False	NA	-20	True	AATAAA	-13	NA	88364241	88334746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359152_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.117	chr9	-	2565	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	-38	6923	-23	6	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGATTTTTCCCCTCTT	NA	False	NA	5	True	AATAAA	-34	NA	88364650	88335984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.119	chr9	-	2326	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364283	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.12	chr9	-	3127	29	FSM	ENSMUSG00000032422.19	ENSMUST00000174806.9	3082	29	-32	-13	5	-2	multi-exon	FALSE	canonical	3	13	junction_14	53.7773542165344	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGCCTTTTGTATTTACT	NA	False	NA	-6	True	AATAAA	-36	NA	88320999	88258806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.120	chr9	-	4537	10	NNC	ENSMUSG00000032423.13	novel	6257	11	NA	NA	14	-8	intron_retention	FALSE	canonical	0	0	junction_1	373.903664888811	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364287	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88337393_88338783_88343722_88343845_88344288_88344439_88345007_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.121	chr9	-	3888	9	NIC	ENSMUSG00000032423.13	novel	6257	11	NA	NA	-14	-8	intron_retention	FALSE	canonical	3	68	junction_8	284.936725432156	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364216	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88338415_88338783_88343722_88344439_88345007_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.122	chr9	-	2021	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	21	4215	21	-8	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364280	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.124	chr9	-	2017	12	NNC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	324.436116035853	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88364200	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.125	chr9	-	2427	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	331	-8	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	265.868823679947	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	False	NA	-9	True	AATAAA	-20	NA	88363853	88335998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88363435
ES.35772.127	chr9	-	2523	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-6	-9	intron_retention	FALSE	canonical	0	0	junction_3	268.240209359737	958	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATCTGCTCTAAGTA	NA	False	NA	-10	True	AATAAA	-19	NA	88364633	88335999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343835_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.128	chr9	-	1898	1	NIC	ENSMUSG00000092541.8	novel	889	9	NA	NA	587	-33388	mono-exon	FALSE	NA	NA	NA	NA	NA	951	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGTTCCAAAAAAATC	NA	False	NA	-1	True	ATTAAA	-21	NA	88337967	88336069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336100_88338000
ES.35772.129	chr9	-	3047	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	-8	-95	-4	95	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGTGTGGAATATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	88364616	88337535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.13	chr9	-	5847	28	NNC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	7	-2	intron_retention	FALSE	canonical	0	0	junction_14	58.133307849128	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGCCTTTTGTATTTACT	NA	False	NA	-6	True	AATAAA	-36	NA	88320944	88258806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88284477_88284710_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.131	chr9	-	4023	10	NIC	ENSMUSG00000032423.13	novel	2944	11	NA	NA	-14	-16	intron_retention	FALSE	canonical	3	839	junction_5	35.6602624918501	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATACGTACTAAAACTGT	NA	False	NA	NA	False	AATAAA	-18	NA	88364216	88337646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.133	chr9	-	2444	10	NIC	ENSMUSG00000032423.13	novel	2944	11	NA	NA	8	-19	combination_of_known_splicesites	FALSE	canonical	2	14	junction_6	288.615768329444	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTATACGTACTAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	88364241	88337649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.134	chr9	-	2525	11	NNC	ENSMUSG00000032423.13	novel	2944	11	NA	NA	-258	-19	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	277.3611544539	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTATACGTACTAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	88363535	88337649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88363435
ES.35772.135	chr9	-	2835	12	NNC	ENSMUSG00000032423.13	novel	2944	11	NA	NA	14	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	268.990798331052	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGTATACGTACTAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	88364594	88337650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108_88364366_88364440
ES.35772.137	chr9	-	2602	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	10	332	10	228	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGGTAGTTAATGAGT	NA	False	NA	NA	False	AATAAA	-17	NA	88364598	88337962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.138	chr9	-	1341	10	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	410	6133	4	2890	5prime_fragment	FALSE	canonical	3	754	junction_3	65.6293370113032	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAAAAGCTCAGAG	NA	False	NA	6	True	NA	NA	NA	88364198	88343763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.14	chr9	-	4506	38	Fusion	ENSMUSG00000032422.19_ENSMUSG00000032423.13	novel	3082	29	NA	NA	1	-2	multi-exon	FALSE	canonical	1	29	junction_27	306.827485595289	1248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGCCTTTTGTATTTACT	NA	False	NA	-6	True	AATAAA	-36	NA	88364201	88258806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88336255_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.15	chr9	-	4708	39	Fusion	ENSMUSG00000032422.19_ENSMUSG00000032423.13	novel	3082	29	NA	NA	2	-3	multi-exon	FALSE	canonical	1	29	junction_27	322.37432862471	1248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGGCCTTTTGTATTTAC	NA	False	NA	-7	True	AATAAA	-35	NA	88364247	88258807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88336255_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.17	chr9	-	2891	28	NNC	ENSMUSG00000032422.19	novel	3082	29	NA	NA	156	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.5534412437171	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGGCCTTTTGTATTTA	NA	False	NA	-8	True	AATAAA	-34	NA	88320795	88258808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286700_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.2	chr9	-	6630	27	NIC	ENSMUSG00000032422.19	novel	3109	28	NA	NA	5	0	intron_retention	FALSE	canonical	3	145	junction_15	27.5163480186602	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATTTACTGTCT	NA	False	NA	-2	True	AATAAA	-40	NA	88320977	88258802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.20	chr9	-	3027	28	NNC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	46.8064045422508	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGGCCTTTTGTATTTA	NA	False	NA	-8	True	AATAAA	-34	NA	88320980	88258808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289516_88292642_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.21	chr9	-	3142	29	NNC	ENSMUSG00000032422.19	novel	3082	29	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	56.9517675452713	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACGGCCTTTTGTATTT	NA	False	NA	-9	True	AATAAA	-33	NA	88320966	88258809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88299408_88299487_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.22	chr9	-	3979	13	NNC	ENSMUSG00000032422.19	novel	1765	13	NA	NA	-2233	-5	intron_retention	FALSE	canonical	0	0	junction_12	59.2649418571666	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACGGCCTTTTGTATTT	NA	False	NA	-9	True	AATAAA	-33	NA	88282907	88258809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280305
ES.35772.24	chr9	-	6677	26	Fusion	ENSMUSG00000032422.19_ENSMUSG00000032423.13	novel	3082	29	NA	NA	-17433	0	intron_retention	FALSE	canonical	1	29	junction_24	111.827538647687	1245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTAGGTATTACGGCC	NA	False	NA	-19	True	AATAAA	-23	NA	88338444	88258819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88284032_88284196_88284322_88285317_88285474_88286356_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88336255_88336349_88338415
ES.35772.25	chr9	-	4726	40	Fusion	ENSMUSG00000032422.19_ENSMUSG00000032423.13	novel	3082	29	NA	NA	2	0	multi-exon	FALSE	canonical	1	13	junction_14	329.448324557256	1248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTAGGTATTACGGCC	NA	False	NA	-19	True	AATAAA	-23	NA	88364247	88258819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88336255_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.29	chr9	-	3737	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	16	54844	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.211464509835	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCCTATGACTTGCA	NA	False	NA	NA	False	NA	NA	NA	88364285	88274217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88274259_88334488_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.30	chr9	-	212	2	ISM	ENSMUSG00000092541.8	ENSMUST00000154586.3	547	4	2209	2268	2209	-2268	internal_fragment	FALSE	canonical	1	29	junction_1	0	1159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGTGTTTTTATATA	NA	False	NA	NA	False	AATAAA	-15	NA	88336345	88304949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88305072_88336255
ES.35772.31	chr9	-	2954	1	FSM	ENSMUSG00000101335.2	ENSMUST00000188747.2	2153	1	-799	-2	-799	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCATACTACTGAAGTTT	NA	False	NA	NA	False	NA	NA	NA	88326504	88323550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88323600_88326500
ES.35772.32	chr9	-	4010	2	Genic_Genomic	ENSMUSG00000101335.2	novel	2153	1	NA	NA	-2333	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATGGGCATACTACT	NA	False	NA	NA	False	NA	NA	NA	88328038	88323557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_88326241_88326711
ES.35772.33	chr9	-	7045	5	ISM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	19587	899	17772	-899	3prime_fragment	FALSE	canonical	3	723	junction_1	89.8926443041921	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGCAGATGCAGTATT	NA	False	NA	NA	False	TATAAA	-17	NA	88345025	88329960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007
ES.35772.34	chr9	-	7928	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	338	1184	-25	-1184	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGGAAGTGCTTCAGA	NA	False	NA	NA	False	AATAAA	-22	NA	88364274	88330245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.36	chr9	-	6744	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	355	2351	-8	371	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGATTGAAATACCAAGTA	NA	False	NA	-2	True	AATAAA	-22	NA	88364257	88331412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.37	chr9	-	6496	11	FSM	ENSMUSG00000032423.13	ENSMUST00000172828.8	1925	11	3	-4574	3	367	multi-exon	FALSE	canonical	0	0	junction_7	353.000906514417	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAGATTGAAATACCA	NA	False	NA	-6	True	AATAAA	-18	NA	88364199	88331416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359152_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.39	chr9	-	5152	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	25520	-221	24016	221	3prime_fragment	FALSE	canonical	3	723	junction_1	0	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTTTTGGAAATACA	NA	False	NA	NA	False	AATAAA	-23	NA	88338781	88331562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88336349_88338415
ES.35772.4	chr9	-	3054	28	NNC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	46.647879816322	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	-3	True	AATAAA	-39	NA	88320956	88258803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287363_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.40	chr9	-	6800	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	-40	2690	-25	32	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTTCATCATTTTTCA	NA	False	NA	16	True	NA	NA	NA	88364652	88331751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.43	chr9	-	6223	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	27	7	-25	-7	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGATCTCCAGGAGTCC	NA	False	NA	-23	True	AATAAA	-21	NA	88364274	88331790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.44	chr9	-	6490	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGGATCTCCAGGAGT	NA	False	NA	-25	True	AATAAA	-19	NA	88364241	88331792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.45	chr9	-	6646	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	6	-10	intron_retention	FALSE	canonical	3	22	junction_5	263.806872760553	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAGGATCTCCAGGAG	NA	False	NA	-26	True	AATAAA	-18	NA	88364621	88331793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.46	chr9	-	6160	11	NNC	ENSMUSG00000032423.13	novel	6257	11	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	363.45598082849	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAGGATCTCCAGGAG	NA	False	NA	-26	True	AATAAA	-18	NA	88364606	88331793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361960_88364413
ES.35772.47	chr9	-	6624	1	NIC	ENSMUSG00000092541.8	novel	889	9	NA	NA	137	-29112	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1063	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAGGATCTCCAGGAG	NA	False	NA	-26	True	AATAAA	-18	NA	88338417	88331793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88331800_88338400
ES.35772.48	chr9	-	6334	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_5	264.084822336366	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	NA	False	NA	-27	True	AATAAA	-17	NA	88364241	88331794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345202_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.5	chr9	-	2996	27	NIC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	46.4874004690181	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	-3	True	AATAAA	-39	NA	88320973	88258803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.50	chr9	-	6155	11	FSM	ENSMUSG00000032423.13	ENSMUST00000172828.8	1925	11	-34	-4196	13	-11	multi-exon	FALSE	canonical	0	0	junction_7	353.000906514417	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	NA	False	NA	-27	True	AATAAA	-17	NA	88364236	88331794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359152_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.51	chr9	-	3537	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	1	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	259.211464509835	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	NA	False	NA	-27	True	AATAAA	-17	NA	88364626	88331794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88331927_88335120_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.52	chr9	-	6268	11	NIC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	16	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	278.306036585626	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	NA	False	NA	-27	True	AATAAA	-17	NA	88364285	88331794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88338415_88338783_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.53	chr9	-	6455	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-22	-14	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	258.683955607782	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTCTTAGGATCTCCA	NA	False	NA	-30	True	AATAAA	-14	NA	88364649	88331797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108_88364203_88364498
ES.35772.54	chr9	-	4817	4	ISM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	19939	311	18435	-311	3prime_fragment	FALSE	canonical	3	723	junction_1	100.180947401301	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTAAATTCTTTTACAT	NA	False	NA	NA	False	ATTAAA	-13	NA	88344362	88332094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288
ES.35772.55	chr9	-	5993	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	27	3430	23	-708	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGACTTCTTGGGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	88364585	88332491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.57	chr9	-	5514	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	33	710	-19	-710	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAGACTTCTTGGGAT	NA	False	NA	NA	False	AATAAA	-20	NA	88364268	88332493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.59	chr9	-	5409	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	387	3654	-23	-932	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATACTGTTTTGATG	NA	False	NA	NA	False	NA	NA	NA	88364225	88332715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.6	chr9	-	5639	27	NNC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	46.8453328208968	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTTGTATTTACTGTC	NA	False	NA	-3	True	AATAAA	-39	NA	88320969	88258803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302307_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.60	chr9	-	4946	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	23	1288	23	-1288	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCTCAGCATGTTTAT	NA	False	NA	NA	False	NA	NA	NA	88364278	88333071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.61	chr9	-	5116	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	293	4041	-18	-1319	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATTATGAGAAAATTG	NA	False	NA	NA	False	CATAAA	-23	NA	88364319	88333102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.63	chr9	-	4727	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	54	1476	2	1230	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTAATAGTCAAGTCC	NA	False	NA	NA	False	NA	NA	NA	88364247	88333259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.64	chr9	-	4807	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	326	4317	15	1111	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGATGTTAACTAATGTA	NA	False	NA	NA	False	AGTAAA	-20	NA	88364286	88333378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.65	chr9	-	4569	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	371	4510	8	918	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATTTCTGTAGAAAAAT	NA	False	NA	NA	False	AAGAAA	-24	NA	88364241	88333571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.66	chr9	-	4481	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	-83	1859	-83	847	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATGTAGTGATTAGTG	NA	False	NA	NA	False	AATATA	-13	NA	88364384	88333642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.67	chr9	-	4393	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-8	807	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	263.806872760553	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGGTGCAGTTTTTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	88364257	88333682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.68	chr9	-	4460	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-293	807	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	265.868823679947	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGGTGCAGTTTTTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	88363570	88333682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88363435
ES.35772.69	chr9	-	4617	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	211	4622	-100	806	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATGGGTGCAGTTTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	88364401	88333683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.7	chr9	-	6144	25	NNC	ENSMUSG00000032422.19	novel	3082	29	NA	NA	-4	0	intron_retention	TRUE	canonical	0	0	junction_15	66.892482138628	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTTTTGTATTTACTGT	NA	False	NA	-4	True	AATAAA	-38	NA	88320986	88258804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286700_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.71	chr9	-	4597	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	8	804	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAATGGGTGCAGTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	88364241	88333685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.72	chr9	-	4684	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	-62	4828	-47	600	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTTTTTTAATTTGGG	NA	False	NA	1	True	ATTAAA	-27	NA	88364674	88333889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.73	chr9	-	4171	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	55	598	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	267.790623775027	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCTTTTTTAATTTG	NA	False	NA	-1	True	ATTAAA	-25	NA	88364553	88333891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364498
ES.35772.75	chr9	-	4089	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	60	2108	8	598	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCTTTTTTAATTTG	NA	False	NA	-1	True	ATTAAA	-25	NA	88364241	88333891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.76	chr9	-	4434	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	14	595	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGGCTTTTTTAAT	NA	False	NA	-4	True	ATTAAA	-22	NA	88364287	88333894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.77	chr9	-	4133	11	NIC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	7	595	combination_of_known_splicesites	FALSE	canonical	2	14	junction_7	275.155973949322	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGGCTTTTTTAAT	NA	False	NA	-4	True	ATTAAA	-22	NA	88364242	88333894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.78	chr9	-	4113	11	NIC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-13	591	combination_of_known_splicesites	FALSE	canonical	1	16	junction_3	274.41800232492	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAAGACTTGGCTTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	88364262	88333898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88338415_88338783_88343722_88343845_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.79	chr9	-	4255	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-304	591	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	265.868823679947	1030	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAAGACTTGGCTTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	88363581	88333898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88363435
ES.35772.8	chr9	-	6680	28	NNC	ENSMUSG00000032422.19	novel	3112	28	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_10	58.1164103053209	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCCTTTTGTATTTACTG	NA	False	NA	-5	True	AATAAA	-37	NA	88320981	88258805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88270746_88270796_88273814_88273899_88276419_88276622_88280291_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ES.35772.80	chr9	-	4214	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	4	591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	269.926375024532	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAAGACTTGGCTTTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	88364198	88333898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345229_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.82	chr9	-	4144	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	45	5261	41	167	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATATTACCCTGTGC	NA	False	NA	NA	False	AATGAA	-16	NA	88364567	88334322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.85	chr9	-	3542	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	14	2701	14	5	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGGTATAGCTGGGGC	NA	False	NA	-8	True	AATAAA	-24	NA	88364287	88334484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.86	chr9	-	3824	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	268.149982702107	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTGGTATAGCTGGGG	NA	False	NA	-9	True	AATAAA	-23	NA	88364268	88334485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338273_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.87	chr9	-	6001	7	NNC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	4409	-1	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	365.907737308495	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGTTACTGGTATAGC	NA	False	NA	-14	True	AATAAA	-18	NA	88358388	88334490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88355223
ES.35772.88	chr9	-	5717	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	366	-3139	7	-2	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCAGTTACTGGTATAG	NA	False	NA	-15	True	AATAAA	-17	NA	88364242	88334491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.89	chr9	-	3756	13	NNC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	314.76687802245	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCAGTTACTGGTATAG	NA	False	NA	-15	True	AATAAA	-17	NA	88364647	88334491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108_88364203_88364498
ES.35772.93	chr9	-	3545	13	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.211464509835	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGTCAGTTACTGGTA	NA	False	NA	-18	True	AATAAA	-14	NA	88364274	88334494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88335503_88335636_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.94	chr9	-	3564	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	263.806872760553	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATGTCAGTTACTGGT	NA	False	NA	-19	True	AATAAA	-13	NA	88364241	88334495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.95	chr9	-	3113	10	NIC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	292.190112304293	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATGTCAGTTACTGGT	NA	False	NA	-19	True	AATAAA	-13	NA	88364198	88334495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88336349_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.96	chr9	-	3420	11	NNC	ENSMUSG00000032423.13	novel	6257	11	NA	NA	874	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	346.02335181314	1008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTATGTCAGTTACT	NA	False	NA	-22	True	AATAAA	-10	NA	88361923	88334498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88355223_88355337_88358841_88359019_88359126_88359241_88361623_88361732_88361846
ES.35772.97	chr9	-	3419	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	26	18	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	263.806872760553	1000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTTAGTATAGAAAAT	NA	False	NA	52	True	AATAAA	-34	NA	88364275	88334674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345133_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35772.98	chr9	-	3651	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	-288	2894	19	15	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGTGTTAGTATAGAA	NA	False	NA	49	True	AATAAA	-31	NA	88364589	88334677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ES.35772.99	chr9	-	3898	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	-67	5619	-52	12	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATGTGTGTTAGTATA	NA	False	NA	46	True	AATAAA	-28	NA	88364679	88334680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ES.35773.1	chr9	-	183	1	Intergenic	novelGene_29127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAAAAACAATGTG	4366	False	NA	NA	False	NA	NA	NA	88375887	88375704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88375700_88375900
ES.35774.1	chr9	+	178	1	Intergenic	novelGene_29128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATAATAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	88376811	88376989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88376800_88377000
ES.35775.1	chr9	-	186	1	Intergenic	novelGene_29129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTCCTGGAACTCAT	NA	False	NA	NA	False	NA	NA	NA	88385514	88385328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88385300_88385500
ES.35776.1	chr9	-	1265	3	NIC	ENSMUSG00000097195.11	novel	1533	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_1	364.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403502_88403970_88404435_88404536
ES.35776.10	chr9	-	1568	2	NNC	ENSMUSG00000097195.11	novel	1533	3	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403731_88403998
ES.35776.11	chr9	-	1466	3	NNC	ENSMUSG00000097195.11	novel	1533	3	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	595	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403731_88403998_88404435_88404536
ES.35776.12	chr9	-	735	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	480.860166784482	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404705_88404903
ES.35776.14	chr9	-	938	5	NIC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	405	junction_1	326.655016799069	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ES.35776.15	chr9	-	1001	4	NIC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	461	junction_1	317.975191205575	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403502_88403970_88404435_88404536_88404640_88404903
ES.35776.16	chr9	-	1012	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	661	5	-10	0	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404954	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
ES.35776.17	chr9	-	663	5	NNC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	474.860176788915	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404633_88404903
ES.35776.19	chr9	-	2670	2	FSM	ENSMUSG00000097195.11	ENSMUST00000182517.3	442	2	-2230	2	-633	0	multi-exon	FALSE	canonical	3	461	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATATTTATTCAATTCT	NA	False	NA	-14	True	AATAAA	-33	NA	88406248	88403109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403970
ES.35776.2	chr9	-	671	5	NIC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404944	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ES.35776.21	chr9	-	666	6	NNC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_5	420.463268312465	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAACATTCAATTG	NA	False	NA	-33	True	AATAAA	-14	NA	88404941	88403128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404592_88404903
ES.35776.22	chr9	-	1513	3	FSM	ENSMUSG00000097195.11	ENSMUST00000239278.2	1534	3	-3	24	0	-10	multi-exon	FALSE	canonical	3	834	junction_1	178	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAACATTCAATTG	NA	False	NA	-33	True	AATAAA	-14	NA	88404944	88403128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403702_88404435_88404536
ES.35776.23	chr9	-	601	5	NNC	ENSMUSG00000097195.11	novel	826	6	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	457.443644069955	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAACATTCAATTG	NA	False	NA	-33	True	AATAAA	-14	NA	88404943	88403128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404592_88404903
ES.35776.3	chr9	-	1834	1	FSM	ENSMUSG00000119666.1	ENSMUST00000240226.1	72	1	-1288	-474	-1288	474	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404941	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403100_88404900
ES.35776.4	chr9	-	942	4	NIC	ENSMUSG00000097195.11	novel	1678	5	NA	NA	-7	0	intron_retention	FALSE	canonical	3	461	junction_1	319.66545011934	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404951	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536
ES.35776.5	chr9	-	738	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	83	5	0	0	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404944	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ES.35776.6	chr9	-	690	5	NNC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	479.444991630948	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404660_88404903
ES.35776.7	chr9	-	1332	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	73	3	0	0	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
ES.35776.8	chr9	-	779	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	27	3	0	0	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ES.35776.9	chr9	-	712	5	NIC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	468.898976326458	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTATTCAATTCTTT	NA	False	NA	-12	True	AATAAA	-35	NA	88404943	88403107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ES.35777.1	chr9	+	2757	1	Genic_Genomic	ENSMUSG00000032425.16	novel	NA	NA	NA	NA	-457	-4220	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88429615	88432372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_88429600_88432400
ES.35777.10	chr9	+	1237	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	6	675	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	4.17612260356422	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTGTAGAGCGATATAA	NA	False	NA	NA	False	AATAGA	-28	NA	88430158	88450911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.11	chr9	+	382	1	Intergenic	novelGene_29130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTACATATTTAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	88437408	88437790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88437400_88437800
ES.35777.2	chr9	+	3315	7	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.19383236885457	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCAGTTTGAGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	88430102	88453113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_88430126_88430251_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.3	chr9	+	3180	7	NNC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.53912563829967	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACTTCAGTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	88430103	88453109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_88430150_88430251_88430354_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.4	chr9	+	3234	8	NNC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	17	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.19407451411428	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	88430113	88453101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_88430150_88430251_88430354_88430489_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.5	chr9	+	3115	7	NNC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.80656320908194	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCACTTCAGTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	88430113	88453108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_88430150_88430251_88430354_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.6	chr9	+	3473	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	12	junction_1	4.17612260356422	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTCAGTTTGAGTAGT	NA	False	NA	NA	False	NA	NA	NA	88430122	88453111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.7	chr9	+	3404	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	55	13	-10	-13	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	88430127	88453101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.8	chr9	+	3302	7	NNC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	7.13559154286922	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	88430127	88453101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_88430150_88430251_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ES.35777.9	chr9	+	4953	5	NIC	ENSMUSG00000032425.16	novel	3163	5	NA	NA	-6	-13	intron_retention	FALSE	canonical	3	12	junction_1	4.58257569495584	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	False	NA	NA	False	NA	NA	NA	88430146	88453101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_88430562_88434714_88436598_88449211_88449339_88449560_88449654_88450666
ES.35778.1	chr9	+	162	1	Intergenic	novelGene_29131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	88453532	88453694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88453500_88453700
ES.35779.1	chr9	+	2015	1	Intergenic	novelGene_29132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGCTCTCATTGCATA	NA	False	NA	NA	False	NA	NA	NA	88460775	88462790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88460800_88462800
ES.3578.1	chr10	-	180	1	Intergenic	novelGene_2736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAACTATAGG	6902	False	NA	NA	False	NA	NA	NA	91131527	91131347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_91131300_91131500
ES.35780.1	chr9	+	1838	7	NIC	ENSMUSG00000090693.5	novel	1981	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	88463089	88470872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_88463244_88464086_88464502_88465085_88465182_88466184_88466419_88467449_88467473_88468141_88468243_88470057
ES.35781.1	chr9	-	174	1	Intergenic	novelGene_29133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGTAAATGTTCT	8883	False	NA	NA	False	NA	NA	NA	88471400	88471226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88471200_88471400
ES.35782.1	chr9	+	241	1	Intergenic	novelGene_29134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTCTTTCATGATTC	NA	False	NA	NA	False	NA	NA	NA	88471953	88472194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88472000_88472200
ES.35783.1	chr9	-	3190	5	NIC	ENSMUSG00000097073.8	novel	3177	5	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	14.2543852901484	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTGAAAATTTTCTTT	1043	False	NA	NA	False	NA	NA	NA	88481553	88477373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88480301_88480521_88480618_88480933_88481009_88481097_88481153_88481516
ES.35784.1	chr9	-	158	1	Intergenic	novelGene_29135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88493615	88493457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88493500_88493600
ES.35785.1	chr9	+	1613	1	Intergenic	novelGene_29136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTACTAGGTGTTCAACA	NA	False	NA	NA	False	NA	NA	NA	88599797	88601410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88599800_88601400
ES.35786.1	chr9	-	4539	5	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	725	4	NA	NA	22	-2699	multi-exon	TRUE	canonical	1	2	junction_1	217.562060111592	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTGGTAATAATGAGC	NA	False	NA	0	True	AATAAA	-27	NA	88601601	88567683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88597540_88597803_88598546_88598617_88599771
ES.35786.10	chr9	-	3111	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	14	-2324	14	2324	multi-exon	FALSE	canonical	3	319	junction_2	104	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCAGGCTAAGAGTTG	NA	False	NA	NA	False	AATATA	-13	NA	88601852	88568330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88571039_88597540_88597803_88601711
ES.35786.11	chr9	-	2149	5	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	-5	2324	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	211.573864170412	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCAGGCTAAGAGTTG	NA	False	NA	NA	False	AATATA	-13	NA	88601628	88568330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88569512_88570489_88571039_88597540_88597803_88598546_88598617_88601541
ES.35786.12	chr9	-	751	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAATAGAAATTATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	88601644	88570652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88571039_88597540_88597803_88601541
ES.35786.13	chr9	-	797	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	4	0	4	0	multi-exon	FALSE	canonical	3	319	junction_2	104	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAATAGAAATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	88601862	88570654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88571039_88597540_88597803_88601711
ES.35786.14	chr9	-	821	3	NIC	ENSMUSG00000079427.11	novel	801	3	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	263.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88602380	88570658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88571039_88597540_88597803_88602201
ES.35786.15	chr9	-	4677	3	NIC	ENSMUSG00000079427.11	novel	1103	2	NA	NA	-3	0	intron_retention	FALSE	canonical	1	5	junction_1	0.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601626	88570658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88571039_88585978_88586190_88597540
ES.35786.16	chr9	-	4463	2	FSM	ENSMUSG00000079427.11	ENSMUST00000185519.7	1103	2	-3360	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601623	88570658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88571039_88597540
ES.35786.17	chr9	-	994	5	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.913973852069	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	88601569	88570659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88571039_88597540_88597803_88598546_88598617_88600226_88600482_88601541
ES.35786.18	chr9	-	3717	3	ISM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	18	-85	1	-1	intron_retention	FALSE	canonical	3	84	junction_2	221.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	88601622	88570659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_88571039_88597540_88597803_88598546
ES.35786.19	chr9	-	1797	7	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	1	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.2085344820889	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	88601639	88570682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88571039_88584788_88584879_88585978_88586190_88597540_88597803_88598546_88598617_88599771_88600482_88601541
ES.35786.2	chr9	-	2848	5	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	801	3	NA	NA	19	-2703	multi-exon	FALSE	canonical	0	0	junction_2	137.699854756641	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATATTTTGGTAATAAT	NA	False	NA	-4	True	AATAAA	-23	NA	88601847	88567687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88590893_88590971_88597540_88597803_88601711
ES.35786.20	chr9	-	829	4	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	14	-24	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	226.851395313222	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	88601852	88570682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88571039_88597540_88597803_88598546_88598617_88601711
ES.35786.21	chr9	-	4002	5	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	5	-24	intron_retention	FALSE	canonical	0	0	junction_1	35.591431553114	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	88601629	88570682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88571039_88584788_88584879_88585978_88586190_88597540_88597803_88598546
ES.35786.22	chr9	-	763	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	24	-62	7	-24	multi-exon	FALSE	canonical	3	43	junction_3	219.136182924378	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	88601616	88570682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
ES.35786.23	chr9	-	1270	7	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	31	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	191.726150189969	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAAATAATATAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	88601592	88570683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88571039_88597540_88597803_88598546_88598617_88599771_88599946_88600235_88600482_88600892_88601005_88601541
ES.35786.24	chr9	-	1477	5	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	217.039598921487	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAATAAAATAATATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	88601622	88570684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88571039_88597540_88597803_88598546_88598617_88599771_88600482_88601541
ES.35786.25	chr9	-	475	3	NIC	ENSMUSG00000079427.11	novel	616	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCTCTGTAACTC	NA	False	NA	NA	False	AATAAA	-12	NA	88601863	88575936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88576187_88576312_88576386_88601711
ES.35786.26	chr9	-	4409	3	NNC	ENSMUSG00000079427.11	novel	801	3	NA	NA	-4	-1706	intron_retention	FALSE	canonical	0	0	junction_1	42	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCACTTTTTGGATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	88601627	88577642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88578709_88597540_88597803_88598546
ES.35786.3	chr9	-	3869	4	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	725	4	NA	NA	-562	-2703	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATATTTTGGTAATAAT	631	False	NA	-4	True	AATAAA	-23	NA	88598825	88567687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88585978_88586190_88597540
ES.35786.4	chr9	-	2769	4	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	801	3	NA	NA	20	-2704	multi-exon	FALSE	canonical	1	2	junction_1	215.864669539866	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATATTTTGGTAATAA	NA	False	NA	-5	True	AATAAA	-22	NA	88601846	88567688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88597540_88597803_88601711
ES.35786.5	chr9	-	2938	5	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	725	4	NA	NA	30	-2707	multi-exon	FALSE	canonical	0	0	junction_3	227.194300104558	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGATATTTTGGTAA	NA	False	NA	-8	True	AATAAA	-19	NA	88601593	88567691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88597540_88597803_88600226_88600482_88601541
ES.35786.6	chr9	-	2688	4	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	725	4	NA	NA	22	-2710	multi-exon	FALSE	canonical	1	2	junction_1	220.34871353279	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATCAGATATTTTGG	NA	False	NA	-11	True	AATAAA	-16	NA	88601601	88567694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88597540_88597803_88601541
ES.35786.7	chr9	-	2968	6	Fusion	ENSMUSG00000102533.2_ENSMUSG00000079427.11	novel	725	4	NA	NA	1	-2712	multi-exon	FALSE	canonical	0	0	junction_5	204.171104713669	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTATCAGATATTTT	NA	False	NA	-13	True	AATAAA	-14	NA	88601639	88567696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_88569512_88570489_88571039_88597540_88597803_88598546_88598617_88599771_88599946_88601541
ES.35786.8	chr9	-	2135	4	NNC	ENSMUSG00000079427.11	novel	801	3	NA	NA	14	2326	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	215.864669539866	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGGCTAAGAGTTGAT	NA	False	NA	NA	False	AATATA	-15	NA	88601852	88568328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88569512_88570489_88571039_88597540_88597803_88601711
ES.35786.9	chr9	-	2048	4	NNC	ENSMUSG00000079427.11	novel	725	4	NA	NA	27	2325	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	220.34871353279	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCAGGCTAAGAGTTGA	NA	False	NA	NA	False	AATATA	-14	NA	88601596	88568329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88569512_88570489_88571039_88597540_88597803_88601541
ES.35787.1	chr9	-	183	1	Intergenic	novelGene_29137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAATGCTA	NA	False	NA	NA	False	NA	NA	NA	88621037	88620854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88620900_88621000
ES.35788.1	chr9	+	10308	3	Intergenic	novelGene_29138	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATTCCTTCTTTAGG	NA	False	NA	NA	False	NA	NA	NA	88694638	88893599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88697860_88698269_88699154_88887396
ES.35788.2	chr9	+	178	1	Intergenic	novelGene_29139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGGGTCGT	NA	False	NA	NA	False	NA	NA	NA	88731284	88731462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88731300_88731500
ES.35788.3	chr9	+	4777	1	FSM	ENSMUSG00000103581.2	ENSMUST00000194342.2	3256	1	159	-1680	159	1680	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGCACACTTTCAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	88863132	88867909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_88863100_88867900
ES.35789.1	chr9	-	4545	3	Antisense	novelGene_ENSMUSG00000101698.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAAAAACCCCACA	8643	False	NA	NA	False	NA	NA	NA	88711156	88699445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_88703405_88710528_88710642_88710683
ES.3579.1	chr10	-	153	1	Intergenic	novelGene_2737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAATAAATAAATAAGTAA	NA	False	NA	NA	False	NA	NA	NA	92124570	92124417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_92124400_92124600
ES.35790.1	chr9	-	5526	1	Genic_Genomic	ENSMUSG00000097177.9	novel	NA	NA	NA	NA	1906	4775	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGGAATCTACAAAGGT	NA	False	NA	NA	False	NA	NA	NA	88738948	88733422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_88733400_88738900
ES.35790.2	chr9	-	1145	2	NNC	ENSMUSG00000097177.9	novel	2265	3	NA	NA	2245	1478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAAATTTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	88738609	88736719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88736791_88737535
ES.35790.3	chr9	-	2583	5	NNC	ENSMUSG00000097177.9	novel	602	5	NA	NA	-4	865	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	9.09326673973661	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGCTTAATTCACT	NA	False	NA	NA	False	NA	NA	NA	88740927	88737332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_88739637_88739866_88739950_88740278_88740354_88740442_88740498_88740861
ES.35790.4	chr9	-	625	5	NIC	ENSMUSG00000097177.9	novel	602	5	NA	NA	0	-14	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	52.4976189936268	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGTGATTGTAAAATT	NA	False	NA	NA	False	TATAAA	-14	NA	88740854	88739298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442_88740498_88740755
ES.35791.1	chr9	+	156	1	Intergenic	novelGene_29140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88937281	88937437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88937300_88937400
ES.35792.1	chr9	+	786	5	Intergenic	novelGene_29141	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGTTATGAGCCATT	NA	False	NA	NA	False	TATAAA	-28	NA	88948801	88957919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
ES.35792.10	chr9	+	2481	6	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	17.0246879560243	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATATAAATAGAATAT	NA	False	NA	NA	False	TATAAA	-44	NA	88949011	88960454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949127_88949384_88949440_88949528_88949604_88957243_88957340_88957565_88959668_88960416
ES.35792.11	chr9	+	676	5	Intergenic	novelGene_29143	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	16.976086121365	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAATTGGTTATGAGCC	NA	False	NA	NA	False	TATAAA	-25	NA	88949027	88957916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88949127_88949384_88949440_88949528_88949604_88957243_88957340_88957565
ES.35792.12	chr9	+	2145	1	Intergenic	novelGene_29144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATGAGAAAAAA	6081	False	NA	NA	False	TATAAA	-32	NA	88963111	88965256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88963100_88965300
ES.35792.2	chr9	+	2550	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	14.9059551857638	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGCTTAATTCACT	NA	False	NA	NA	False	NA	NA	NA	88948966	88959873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957281_88957340_88957565
ES.35792.3	chr9	+	3145	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATATAAATAGAATAT	NA	False	NA	NA	False	TATAAA	-44	NA	88948977	88960454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
ES.35792.4	chr9	+	2504	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATGTTATTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	88948983	88959819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
ES.35792.5	chr9	+	1712	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	14.9059551857638	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCCAGAGTGCCCTT	NA	False	NA	NA	False	AATAAA	-30	NA	88948983	88959014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957243_88957340_88957565
ES.35792.6	chr9	+	1892	6	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	16.6060230037177	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATGAGAAAAAA	NA	False	NA	NA	False	TATAAA	-32	NA	88948987	88965256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957243_88957340_88957565_88958475_88964532
ES.35792.7	chr9	+	1689	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	8.87411967464942	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCAGAGTGCCCTTGTC	NA	False	NA	NA	False	AATAAA	-33	NA	88948996	88959017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957256_88957340_88957565
ES.35792.8	chr9	+	1003	5	Antisense	novelGene_ENSMUSG00000100602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	14.9059551857638	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAATGATTTCACATA	NA	False	NA	NA	False	AATAAA	-14	NA	88949002	88958324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_88949021_88949384_88949440_88949528_88949604_88957243_88957340_88957565
ES.35792.9	chr9	+	658	5	Intergenic	novelGene_29142	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	16.976086121365	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGTTATGAGCCATT	NA	False	NA	NA	False	TATAAA	-28	NA	88949010	88957919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_88949127_88949384_88949440_88949528_88949604_88957281_88957340_88957565
ES.35793.1	chr9	-	174	1	Intergenic	novelGene_29145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGAGGGTCGTGTGC	NA	False	NA	NA	False	NA	NA	NA	88965895	88965721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88965700_88965900
ES.35794.1	chr9	-	185	1	Intergenic	novelGene_29146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACACTCGCATAGGA	NA	False	NA	NA	False	NA	NA	NA	88984366	88984181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88984200_88984400
ES.35795.1	chr9	-	185	1	Intergenic	novelGene_29147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATGTCAAGTTACA	NA	False	NA	NA	False	NA	NA	NA	88984618	88984433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_88984400_88984600
ES.35796.1	chr9	+	956	4	NNC	ENSMUSG00000066442.18	novel	705	3	NA	NA	14	4000	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	82.4957911384305	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAGTGTGTTGTTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	89093223	89220460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_89093365_89097261_89097524_89218413_89218569_89220062
ES.35796.10	chr9	+	3660	3	NIC	ENSMUSG00000066442.18	novel	705	4	NA	NA	27	4	intron_retention	FALSE	canonical	3	44	junction_1	174.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATAAAATAATATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	89093490	89122248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_89096535_89097261_89097524_89121894
ES.35796.2	chr9	+	759	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	14	43	14	6	multi-exon	TRUE	canonical	3	175	junction_1	109	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	89093223	89122250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_89093365_89097261_89097524_89121894
ES.35796.3	chr9	+	2144	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	20	-1348	20	1348	multi-exon	FALSE	canonical	3	175	junction_1	109	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGGCTAAGAGTTGAT	NA	False	NA	NA	False	AATATA	-16	NA	89093229	89123641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_89093365_89097261_89097524_89121894
ES.35796.4	chr9	+	808	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	-91	6	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	89093344	89122250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_89093535_89097261_89097524_89121894
ES.35796.5	chr9	+	4446	2	FSM	ENSMUSG00000066442.18	ENSMUST00000127868.2	655	2	-3542	-249	0	-6	multi-exon	FALSE	canonical	3	393	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTTAGAAATCAATAGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	89093456	89122273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_89097524_89121894
ES.35796.6	chr9	+	958	4	NNC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.026724796417	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAATATAAAA	NA	False	NA	NA	False	ATTAAA	-28	NA	89093461	89122250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_89093535_89094586_89094854_89097261_89097524_89121894
ES.35796.7	chr9	+	413	2	NNC	ENSMUSG00000066442.18	novel	481	2	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATAAAATAATATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	89093471	89122248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_89093531_89121894
ES.35796.8	chr9	+	1690	5	NNC	ENSMUSG00000066442.18	novel	705	4	NA	NA	9	-29126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	161.598847458761	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAACGGGATATTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	89093472	89187334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_89093535_89097261_89097524_89121894_89122089_89186036_89186130_89186255
ES.35796.9	chr9	+	4218	1	NIC	ENSMUSG00000066442.18	novel	765	4	NA	NA	11	-10819	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTTTGTGTATTTTGT	NA	False	NA	NA	False	CATAAA	-16	NA	89093474	89097692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_89093500_89097700
ES.35797.1	chr9	-	4527	1	Antisense	novelGene_ENSMUSG00000100838.2_AS_novelGene_ENSMUSG00000066442.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTAGGTGTTCAACAC	NA	False	NA	NA	False	NA	NA	NA	89098191	89093664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_89093700_89098200
ES.35798.1	chr9	-	7541	1	Antisense	novelGene_ENSMUSG00000066442.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	89257629	89250088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_89250100_89257600
ES.35799.1	chr9	-	7333	4	FSM	ENSMUSG00000039313.15	ENSMUST00000044491.13	7202	4	-129	-2	-129	2	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTGAGACTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	89505307	89469266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89473354_89478488_89478744_89483094_89485448_89504669
ES.358.1	chr1	-	5038	8	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-14	3726	intron_retention	FALSE	canonical	0	0	junction_7	80.2913063634602	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTCTCAAGATTATATA	4752	False	NA	1	True	AATAAA	-22	NA	39616451	39586650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39586743_39588006_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615788
ES.358.10	chr1	-	2575	8	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	80.2824096930483	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4711	False	NA	-8	True	AATAAA	-12	NA	39616492	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39610938_39611021_39615907
ES.358.11	chr1	-	2049	6	Fusion	ENSMUSG00000085894.2_ENSMUSG00000048234.14	novel	668	6	NA	NA	13	-5	multi-exon	FALSE	canonical	2	5	junction_5	86.5184373414129	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4730	False	NA	-8	True	AATAAA	-12	NA	39616473	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39616235
ES.358.12	chr1	-	2431	7	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.7216525361145	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4767	False	NA	-8	True	AATAAA	-12	NA	39616436	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604408_39615907
ES.358.13	chr1	-	2285	8	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.242649004143	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4730	False	NA	-8	True	AATAAA	-12	NA	39616473	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591282_39591470_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.15	chr1	-	2249	8	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.5103618632219	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4709	False	NA	-8	True	AATAAA	-12	NA	39616494	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39610938_39611021_39616235
ES.358.16	chr1	-	2391	6	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	66.5924920693016	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4716	False	NA	-8	True	AATAAA	-12	NA	39616487	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.17	chr1	-	2003	7	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	54	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	65.8847900167827	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTCTATGTAACA	4873	False	NA	-8	True	AATAAA	-12	NA	39616330	39590381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39616235
ES.358.2	chr1	-	3471	8	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-14	3712	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	87.1245882489612	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGGTTATTCAGT	4752	False	NA	-13	True	AATAAA	-8	NA	39616451	39586664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39586743_39588006_39588198_39589534_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.22	chr1	-	2253	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	-15	254	-15	-254	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTGATTCTGTTGTT	4702	False	NA	NA	False	ATTAAA	-12	NA	39616501	39590630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.23	chr1	-	2237	7	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-15	-255	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	67.7899123927906	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTTGATTCTGTTGT	4702	False	NA	NA	False	ATTAAA	-11	NA	39616501	39590631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597478_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.24	chr1	-	2117	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	-22	397	-22	-397	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGCAAAAAATGCCATAT	4695	False	NA	NA	False	NA	NA	NA	39616508	39590773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.25	chr1	-	2077	7	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	12	-397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.7216525361145	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGCAAAAAATGCCATAT	4729	False	NA	NA	False	NA	NA	NA	39616474	39590773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604408_39615907
ES.358.26	chr1	-	2011	6	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-13	-397	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	66.5924920693016	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGCAAAAAATGCCATAT	4704	False	NA	NA	False	NA	NA	NA	39616499	39590773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39591597_39594558_39594752_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.3	chr1	-	1263	1	FSM	ENSMUSG00000077704.3	ENSMUST00000104516.3	110	1	4	-1157	4	1157	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGATTGTGGTTATT	NA	False	NA	-17	True	AATAAA	-4	NA	39587931	39586668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39586700_39587900
ES.358.4	chr1	-	3871	4	Fusion	ENSMUSG00000085894.2_ENSMUSG00000048234.14	novel	1832	3	NA	NA	1736	-18	multi-exon	FALSE	canonical	1	2	junction_2	90.0530707724926	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGATTGTGGTTATT	NA	False	NA	-17	True	AATAAA	-4	NA	39596102	39586668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_39586743_39588006_39588198_39589534_39591597_39594558
ES.358.5	chr1	-	5296	4	Fusion	ENSMUSG00000085894.2_ENSMUSG00000048234.14	novel	1832	3	NA	NA	1242	-20	multi-exon	FALSE	non_canonical	0	0	junction_2	90.5428075553216	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGTTGATTGTGGTTA	NA	False	NA	-19	True	AATAAA	-2	NA	39596596	39586670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_39586743_39588006_39589118_39589521_39591597_39594558
ES.358.6	chr1	-	2684	7	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-21	170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.9313378836798	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGACTTTATGTGTATG	4696	False	NA	NA	False	GATAAA	-17	NA	39616507	39590206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597394_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.7	chr1	-	2519	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	-27	0	-27	0	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4690	False	NA	-3	True	AATAAA	-17	NA	39616513	39590376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.8	chr1	-	7404	5	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	13	0	intron_retention	FALSE	canonical	3	173	junction_4	9.03811374126261	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4730	False	NA	-3	True	AATAAA	-17	NA	39616473	39590376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_39591597_39594558_39599857_39603128_39603198_39604162_39604414_39615907
ES.358.9	chr1	-	2381	8	NNC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	-24	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	63.242649004143	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4742	False	NA	-3	True	AATAAA	-17	NA	39616461	39590376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907_39615967_39616052
ES.3580.1	chr10	-	3546	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	-11	-1	-11	1	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTGAGCTTGAACCT	NA	False	NA	0	True	AATAAA	-20	NA	92558293	92520606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.11	chr10	-	2942	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	15	-331	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	47.0005665331586	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTATCTCCAAAAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	92558251	92520938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.12	chr10	-	2666	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	50	818	-7	-818	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACTATAAGATTTTCA	NA	False	NA	NA	False	AATGAA	-17	NA	92558232	92521425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.13	chr10	-	2543	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	51	940	-6	-940	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATACATGGTACCTTTG	NA	False	NA	NA	False	AATACA	-21	NA	92558231	92521547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.15	chr10	-	2203	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	48	1283	-9	-1283	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCCTAGTGGGGAAGT	NA	False	NA	-21	True	ATTAAA	-16	NA	92558234	92521890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.16	chr10	-	3543	6	NNC	ENSMUSG00000019988.8	novel	391	4	NA	NA	15	4308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.6247768666682	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTTTGTATGATTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	92558251	92542836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_92545816_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.2	chr10	-	3397	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	48.0154067976189	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92558274	92520607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.3	chr10	-	6240	8	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	14128	0	intron_retention	FALSE	canonical	3	126	junction_7	15.5733943713276	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92538212	92520607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581
ES.3580.4	chr10	-	3279	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.2465958705163	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92558230	92520607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.5	chr10	-	3494	15	NNC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.362865594379	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGTCTGAGCTTGAAC	NA	False	NA	-2	True	AATAAA	-18	NA	92558248	92520608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528789_92530837_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.6	chr10	-	4544	14	NNC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	47.8400936058137	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGTCTGAGCTTGAAC	NA	False	NA	-2	True	AATAAA	-18	NA	92558251	92520608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552116_92555347_92555492_92558184
ES.3580.7	chr10	-	5376	13	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	126	junction_7	16.1529151135845	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGACAGTCTGAGCTTGA	NA	False	NA	-4	True	AATAAA	-16	NA	92558227	92520610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.3580.8	chr10	-	3212	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	8	314	-8	-314	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAACAGGAGTAAGACTT	NA	False	NA	NA	False	AATAAA	-30	NA	92558274	92520921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ES.35800.1	chr9	-	1348	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	-1	-1	-1	1	multi-exon	FALSE	canonical	3	96	junction_1	7.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGGAGTGATGTGTGCC	NA	False	NA	-11	True	AATAAA	-15	NA	89587122	89581257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89582033_89584824_89585074_89586798
ES.35801.1	chr9	+	1373	12	FSM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	242	2	3	0	multi-exon	FALSE	canonical	2	5	junction_2	3.46648653907957	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGGCGTAGGTCTCTA	NA	False	NA	4	True	AATAAA	-16	NA	89936561	89958140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
ES.35802.1	chr9	-	174	1	Intergenic	novelGene_29148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	89965828	89965654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_89965700_89965800
ES.35803.1	chr9	+	2673	1	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACAGATGGATGAGTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	89971295	89973968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_89971300_89974000
ES.35803.2	chr9	+	4418	2	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACATCACACAGCCGG	NA	False	NA	NA	False	NA	NA	NA	89971295	89978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_89975127_89978228
ES.35803.3	chr9	+	5097	4	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACATCACACAGCCGG	NA	False	NA	NA	False	NA	NA	NA	89971295	89978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_89975872_89976407_89976579_89977172_89977263_89978555
ES.35803.4	chr9	+	4360	4	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACATCACACAGCCGG	NA	False	NA	NA	False	NA	NA	NA	89971295	89978815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_89974452_89975782_89975872_89976407_89977263_89978555
ES.35803.5	chr9	+	1747	1	Antisense	novelGene_ENSMUSG00000062270.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGCCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89977031	89978778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_89977000_89978800
ES.35804.1	chr9	-	1749	2	Intergenic	novelGene_29149	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCGTGGTTTTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	89971086	89967501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_89967967_89969802
ES.35804.10	chr9	-	1647	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1998.57081166923	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCCGTGTTATCA	NA	False	NA	NA	False	AATAAA	-23	NA	89996645	89973718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982489_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.11	chr9	-	4635	10	FSM	ENSMUSG00000062270.15	ENSMUST00000190377.7	4640	10	7	-2	7	2	multi-exon	FALSE	canonical	3	6220	junction_6	287.280007082177	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996686	89973721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.12	chr9	-	3144	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2075.65946903748	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996579	89973721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992471_89995261
ES.35804.13	chr9	-	4367	12	NIC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	8	2	intron_retention	FALSE	canonical	3	323	junction_9	2457.5767174829	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996704	89973721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ES.35804.14	chr9	-	3027	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	9	2	intron_retention	FALSE	canonical	3	3415	junction_6	1204.37672262461	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTGGCCGTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	89996703	89973721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.15	chr9	-	4273	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-16	1	intron_retention	FALSE	canonical	3	3987	junction_6	839.723978459589	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGATTGTGTGGCCGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	89996728	89973722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.16	chr9	-	1710	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2099.67951509646	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996725	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984434_89989287_89989356_89992178_89992226_89996588
ES.35804.2	chr9	-	4182	10	ISM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	7494	-2666	7009	2666	3prime_fragment	FALSE	canonical	3	3415	junction_7	1209.7772471221	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGGTCCCAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	89989333	89971051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287
ES.35804.23	chr9	-	1578	10	NIC	ENSMUSG00000062270.15	novel	1540	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	2189.3605357628	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996702	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89996588
ES.35804.24	chr9	-	1642	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	133	junction_10	2078.88549227705	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996698	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89996588
ES.35804.25	chr9	-	2230	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	9	0	intron_retention	FALSE	canonical	3	3415	junction_6	1216.96363544684	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996703	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.26	chr9	-	2267	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	3415	junction_6	1185.82732301124	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996683	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.27	chr9	-	1717	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2093.38813907657	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996718	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975880_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.29	chr9	-	1665	11	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2112.26881811951	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996706	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989371_89996588
ES.35804.3	chr9	-	4017	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	18	-2211	-12	2211	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCCCTGCCTGCCTTG	NA	False	NA	NA	False	TTTAAA	-10	NA	89996809	89971506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.31	chr9	-	1666	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2075.65946903748	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996669	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996582
ES.35804.33	chr9	-	1671	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_9	2097.52729274297	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996655	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984465_89989287_89989356_89992178_89992226_89996588
ES.35804.34	chr9	-	1684	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2099.67951509646	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996701	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989295_89989356_89992178_89992226_89996588
ES.35804.36	chr9	-	4168	7	NNC	ENSMUSG00000062270.15	novel	4640	10	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_5	2492.56064230252	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996703	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89980919_89992178_89992226_89996588
ES.35804.37	chr9	-	1617	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	2169.84053791978	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996728	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.38	chr9	-	1943	13	NNC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2728.61709479362	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996849	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975800_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ES.35804.4	chr9	-	3779	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	139	-2094	5	2094	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTCTTCTGGCGCTGG	NA	False	NA	NA	False	NA	NA	NA	89996688	89971623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.42	chr9	-	1645	11	NNC	ENSMUSG00000062270.15	novel	4640	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2008.93909564227	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996674	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89982489_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.43	chr9	-	1688	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2064.67613372899	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996689	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977165_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.44	chr9	-	1556	10	NNC	ENSMUSG00000062270.15	novel	1540	10	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2197.25222342209	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996704	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984420_89996592
ES.35804.45	chr9	-	1682	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2064.67613372899	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996709	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976563_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.46	chr9	-	1686	12	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2559.79949821746	1460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996703	89973723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982497_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996594
ES.35804.47	chr9	-	1414	10	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2198.65011336221	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGATTGTGTGGCCGT	NA	False	NA	NA	False	AATAAA	-16	NA	89996683	89973725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.48	chr9	-	1354	8	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	-8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2334.12255943191	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGATTGTGTGGCCGT	NA	False	NA	NA	False	AATAAA	-16	NA	89996671	89973725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.49	chr9	-	1837	13	NNC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	4116	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2771.89704895402	1457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGATTGTGTGGCCGT	NA	False	NA	NA	False	AATAAA	-16	NA	89992226	89973725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985084_89985227_89985707_89985825_89989287_89989356_89992178
ES.35804.5	chr9	-	3050	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	-25	-1201	-25	1201	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTATTAATCCTTGAC	NA	False	NA	NA	False	NA	NA	NA	89996852	89972516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.52	chr9	-	1298	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	60	466	1	24	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTACCAGTGTATC	NA	False	NA	NA	False	AATAAA	-39	NA	89996767	89974183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.53	chr9	-	1491	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	-84	475	-25	15	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTCAAAGTTTCTAC	NA	False	NA	NA	False	AATAAA	-30	NA	89996852	89974192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ES.35804.54	chr9	-	1143	11	FSM	ENSMUSG00000062270.15	ENSMUST00000191189.7	1223	11	93	-13	8	13	multi-exon	FALSE	canonical	3	6	junction_7	2089.62901970661	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATTTCAAAGTTTCT	NA	False	NA	NA	False	AATAAA	-28	NA	89996704	89974194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.55	chr9	-	1151	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	8	3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	2169.84053791978	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCTTTTTTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	89996743	89974204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.57	chr9	-	6197	2	NNC	ENSMUSG00000062270.15	novel	666	4	NA	NA	-7024	977	intron_retention	TRUE	canonical	0	0	junction_1	0	1435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATGACGGATACATACG	NA	False	NA	NA	False	NA	NA	NA	89986966	89978058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89978254_89980964
ES.35804.58	chr9	-	3648	1	NIC	ENSMUSG00000062270.15	novel	1882	13	NA	NA	4583	1578	mono-exon	FALSE	NA	NA	NA	NA	NA	1380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGGGAGCTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	89991759	89988111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_89988100_89991800
ES.35804.59	chr9	-	161	1	Intergenic	novelGene_29150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	89992893	89992732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_89992700_89992900
ES.35804.6	chr9	-	1825	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	-2	1	-2	-1	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCCGTGTTATCA	NA	False	NA	NA	False	AATAAA	-23	NA	89996829	89973718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ES.35804.8	chr9	-	1910	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	-29	1	0	-1	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCCGTGTTATCA	NA	False	NA	NA	False	AATAAA	-23	NA	89996797	89973718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ES.35804.9	chr9	-	3007	11	NNC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	2619.85671554763	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGCCGTGTTATCA	NA	False	NA	NA	False	AATAAA	-23	NA	89996661	89973718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_89975887_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996584
ES.35805.1	chr9	+	182	1	Intergenic	novelGene_29151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTTCATTATG	NA	False	NA	NA	False	NA	NA	NA	89998895	89999077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_89998900_89999100
ES.35806.1	chr9	-	134	1	Intergenic	novelGene_29152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90000306	90000172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90000200_90000300
ES.35807.1	chr9	+	2224	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-52	-1301	-52	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATTTTCA	NA	False	NA	NA	False	AATACA	-17	NA	90000937	90003161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_90000900_90003200
ES.35807.2	chr9	+	1561	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	249	-939	249	939	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTCATGCATGGTACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	90001238	90002799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_90001200_90002800
ES.35808.1	chr9	-	179	1	Intergenic	novelGene_29153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90020971	90020792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90020800_90021000
ES.35809.1	chr9	+	5349	24	NNC	ENSMUSG00000032363.16	novel	5098	24	NA	NA	-173	-1	intron_retention	FALSE	canonical	2	9	junction_7	7.97752040160563	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	4	True	CATAAA	-18	NA	90044948	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.10	chr9	+	6334	22	NIC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-102	-6	intron_retention	FALSE	canonical	2	9	junction_17	7.63747770927269	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCAGAGTGGTTTGG	NA	False	NA	-4	True	CATAAA	-10	NA	90045019	90082144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90075919_90076095_90076323_90077210_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.12	chr9	+	4596	22	NNC	ENSMUSG00000032363.16	novel	5098	24	NA	NA	10372	1	intron_retention	FALSE	non_canonical	0	0	junction_8	9.40858873317956	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGCCTTGTCTTT	355	False	NA	6	True	CATAAA	-20	NA	90055650	90082154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068602_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.13	chr9	+	4467	23	NIC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	10528	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	7.83085653358474	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	511	False	NA	4	True	CATAAA	-18	NA	90055806	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.14	chr9	+	5886	14	NNC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-9201	-1	intron_retention	FALSE	canonical	0	0	junction_4	11.3757761943381	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGTGGTTTGGCCTTG	6210	False	NA	1	True	CATAAA	-15	NA	90061505	90082149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90070321_90070492_90070711_90070846_90071671_90073146_90073417_90073554_90073888_90075919_90076095_90076323_90077210_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.15	chr9	+	4539	9	NIC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	80	-1	intron_retention	FALSE	canonical	3	9	junction_4	8.58778201865883	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGTGGTTTGGCCTTG	3017	False	NA	1	True	CATAAA	-15	NA	90070786	90082149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_90070846_90071671_90071793_90072900_90073146_90073417_90075919_90076095_90076323_90077210_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.16	chr9	+	2756	9	NNC	ENSMUSG00000032363.16	novel	5379	24	NA	NA	474	0	intron_retention	FALSE	canonical	0	0	junction_3	12.1320855585509	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGTTTGGCCTTGT	5741	False	NA	2	True	CATAAA	-16	NA	90073510	90082150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90073554_90073888_90074016_90074433_90074628_90074951_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.2	chr9	+	5245	25	FSM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	-301	-111	-168	1	multi-exon	FALSE	canonical	2	9	junction_18	7.86065713255295	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGCCTTGTCTTT	NA	False	NA	6	True	CATAAA	-20	NA	90044953	90082154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.3	chr9	+	5010	24	NNC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.36610952111049	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGTTTGGCCTTGT	NA	False	NA	2	True	CATAAA	-16	NA	90044962	90082150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.4	chr9	+	5157	25	NNC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-158	-1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	8.26093551333961	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	4	True	CATAAA	-18	NA	90044963	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.5	chr9	+	5281	25	NNC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-158	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	9.08744173143477	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	4	True	CATAAA	-18	NA	90044963	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90068974_90069119_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.6	chr9	+	5750	24	NNC	ENSMUSG00000032363.16	novel	4833	25	NA	NA	-157	0	intron_retention	FALSE	canonical	0	0	junction_6	9.15380033054542	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGTTTGGCCTTGT	NA	False	NA	2	True	CATAAA	-16	NA	90044964	90082150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060497_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.7	chr9	+	5842	22	NNC	ENSMUSG00000032363.16	novel	5098	24	NA	NA	-153	-1	intron_retention	FALSE	canonical	0	0	junction_6	10.1158818577343	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	4	True	CATAAA	-18	NA	90044968	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060497_90061375_90061526_90062753_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90074433_90074648_90075077_90076323_90077210_90077364_90077475_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.8	chr9	+	5382	24	FSM	ENSMUSG00000032363.16	ENSMUST00000113060.3	5098	24	-289	5	-132	0	multi-exon	FALSE	canonical	2	9	junction_18	7.51406997818433	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGTGGTTTGGCCTTGT	NA	False	NA	2	True	CATAAA	-16	NA	90044989	90082150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.35809.9	chr9	+	5483	24	FSM	ENSMUSG00000032363.16	ENSMUST00000113059.8	5379	24	-105	1	-105	-1	multi-exon	FALSE	canonical	2	12	junction_18	7.29502510649195	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTTGGCCTTGTCT	NA	False	NA	4	True	CATAAA	-18	NA	90045016	90082152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ES.3581.1	chr10	-	2201	1	Intergenic	novelGene_2738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCAGGGTGGGATCTGGC	NA	False	NA	NA	False	NA	NA	NA	92598176	92595975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_92596000_92598200
ES.35810.1	chr9	-	176	2	Intergenic	novelGene_29154	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATCACTCAAA	NA	False	NA	NA	False	NA	NA	NA	90050293	90026926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90026936_90050126
ES.35810.2	chr9	-	3387	1	Intergenic	novelGene_29155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCACATCCTCGGAGTCA	NA	False	NA	NA	False	NA	NA	NA	90050292	90046905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90046900_90050300
ES.35810.3	chr9	-	179	1	Intergenic	novelGene_29156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTACTTGGA	NA	False	NA	NA	False	NA	NA	NA	90050295	90050116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90050100_90050300
ES.35811.1	chr9	+	241	1	Intergenic	novelGene_29157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAATATATATTTT	NA	False	NA	NA	False	NA	NA	NA	90100016	90100257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_90100000_90100300
ES.35812.1	chr9	-	5658	13	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-4	-20	combination_of_known_splicesites	FALSE	canonical	2	4	junction_12	18.7387002988171	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGTAGTCATTTGTG	NA	False	NA	-20	True	AATAAA	-29	NA	90152861	90084099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
ES.35812.10	chr9	-	6239	13	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	12	-33	intron_retention	FALSE	canonical	1	3	junction_9	19.3496698220466	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCAAAAGGTAGGT	NA	False	NA	-33	True	AATAAA	-16	NA	90152845	90084112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109921_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.11	chr9	-	6937	13	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	12	-33	intron_retention	FALSE	canonical	0	0	junction_1	24.8979863085797	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCAAAAGGTAGGT	NA	False	NA	-33	True	AATAAA	-16	NA	90152845	90084112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90111155_90123062_90123232_90131843_90131998_90152721
ES.35812.12	chr9	-	5589	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-3	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9311141581848	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCTCAAAAGGTAGGT	NA	False	NA	-33	True	AATAAA	-16	NA	90152860	90084112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
ES.35812.14	chr9	-	5718	13	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-2	-34	intron_retention	FALSE	canonical	0	0	junction_1	26.1219097055837	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCCTCAAAAGGTAGG	NA	False	NA	-34	True	AATAAA	-15	NA	90152859	90084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.15	chr9	-	6000	15	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	14	-34	intron_retention	FALSE	canonical	0	0	junction_1	27.3492155616342	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCCTCAAAAGGTAGG	NA	False	NA	-34	True	AATAAA	-15	NA	90152808	90084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90096595_90096743_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.16	chr9	-	7279	12	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	6	-34	intron_retention	FALSE	canonical	3	55	junction_2	9.02796390286342	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCCTCAAAAGGTAGG	NA	False	NA	-34	True	AATAAA	-15	NA	90152816	90084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.17	chr9	-	5872	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-3	-34	intron_retention	FALSE	canonical	0	0	junction_1	24.427407247845	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCCTCAAAAGGTAGG	NA	False	NA	-34	True	AATAAA	-15	NA	90152860	90084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152437
ES.35812.18	chr9	-	5728	15	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	4	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.0220986695542	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCCTCAAAAGGTAGG	NA	False	NA	-34	True	AATAAA	-15	NA	90152853	90084113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404_90152552_90152721
ES.35812.19	chr9	-	5316	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	48	-537	intron_retention	FALSE	canonical	0	0	junction_1	19.324999904315	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCTGTATGTATTTATA	NA	False	NA	NA	False	NA	NA	NA	90152774	90084616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.20	chr9	-	4713	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	18	-1170	intron_retention	FALSE	canonical	0	0	junction_1	19.324999904315	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCCCTGAGAGACGGCA	NA	False	NA	NA	False	NA	NA	NA	90152804	90085249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.21	chr9	-	3228	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	6	2722	6	-2722	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTGTGCGTGTTTCGC	NA	False	NA	NA	False	NA	NA	NA	90152816	90086801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.22	chr9	-	125	1	FSM	ENSMUSG00000081520.2	ENSMUST00000120385.2	331	1	251	-45	251	45	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTGTCAGGG	3606	False	NA	NA	False	AATAAA	-24	NA	90103427	90103302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_90103300_90103400
ES.35812.23	chr9	-	2285	4	ISM	ENSMUSG00000037410.14	ENSMUST00000144348.8	655	5	-2	-1458	-2	1458	intron_retention	FALSE	canonical	3	61	junction_1	8.60232526704263	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATTTTTAAATATAG	NA	False	NA	NA	False	NA	NA	NA	90152859	90109647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.24	chr9	-	1932	4	NIC	ENSMUSG00000037410.14	novel	655	5	NA	NA	1	1458	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	32.9545141065682	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATTTTTAAATATAG	NA	False	NA	NA	False	NA	NA	NA	90152823	90109647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_90111155_90123062_90123232_90131843_90131998_90152721
ES.35812.25	chr9	-	1140	5	NNC	ENSMUSG00000037410.14	novel	655	5	NA	NA	38	1458	intron_retention	FALSE	canonical	1	3	junction_1	30.7926533445885	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATTTTTAAATATAG	NA	False	NA	NA	False	NA	NA	NA	90152784	90109647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90109921_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.26	chr9	-	975	4	NNC	ENSMUSG00000037410.14	novel	3473	3	NA	NA	-4	14	intron_retention	FALSE	canonical	3	8	junction_1	32.9679979508749	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACTTTGTATTGGAAC	NA	False	NA	NA	False	AATAAA	-32	NA	90152861	90120318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90120514_90123062_90123232_90131843_90131998_90152404
ES.35812.27	chr9	-	3449	3	FSM	ENSMUSG00000037410.14	ENSMUST00000128874.3	3473	3	23	1	21	-1	multi-exon	FALSE	canonical	3	73	junction_2	4.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCTTCAGACATA	NA	False	NA	NA	False	AATAAA	-17	NA	90152801	90120333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_90123232_90131843_90131998_90152404
ES.35812.3	chr9	-	5929	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-13	-20	intron_retention	FALSE	canonical	0	0	junction_1	19.324999904315	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGTAGTCATTTGTG	NA	False	NA	-20	True	AATAAA	-29	NA	90152870	90084099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.4	chr9	-	5805	14	NIC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	-4	-20	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	19.0868460544872	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGTAGTCATTTGTG	NA	False	NA	-20	True	AATAAA	-29	NA	90152861	90084099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404_90152552_90152721
ES.35812.5	chr9	-	7750	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	27	-20	intron_retention	TRUE	canonical	0	0	junction_1	30.9531044413353	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGTAGTCATTTGTG	NA	False	NA	-20	True	AATAAA	-29	NA	90152795	90084099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90091907_90096595_90096743_90097530_90097649_90100712_90101184_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.6	chr9	-	6452	3	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	44820	-24	intron_retention	FALSE	canonical	0	0	junction_1	30	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAGGTGTAGTCATT	3572	False	NA	-24	True	AATAAA	-25	NA	90093160	90084103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825
ES.35812.7	chr9	-	5491	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.070147753721	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAGGTGTAGTCATT	NA	False	NA	-24	True	AATAAA	-25	NA	90152822	90084103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108389_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152721
ES.35812.8	chr9	-	5779	14	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	27	-26	intron_retention	FALSE	canonical	0	0	junction_1	24.4051115026263	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTAGGTGTAGTCA	NA	False	NA	-26	True	AATAAA	-23	NA	90152795	90084105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90086446_90086500_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108389_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35812.9	chr9	-	5842	13	NNC	ENSMUSG00000037410.14	novel	5956	13	NA	NA	15	-30	intron_retention	FALSE	canonical	0	0	junction_8	19.5254463599569	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAAAAGGTAGGTGTA	NA	False	NA	-30	True	AATAAA	-19	NA	90152807	90084109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108389_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ES.35813.1	chr9	-	177	1	Intergenic	novelGene_29158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAATTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90180719	90180542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_90180500_90180700
ES.35814.1	chr9	+	219	1	Intergenic	novelGene_29159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAAGGTGATGAATAAC	NA	False	NA	NA	False	NA	NA	NA	91221730	91221949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_91221700_91221900
ES.35815.1	chr9	+	173	1	Intergenic	novelGene_29160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATGGAACTCAAC	NA	False	NA	NA	False	NA	NA	NA	91451265	91451438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_91451300_91451400
ES.35816.1	chr9	+	1841	1	Intergenic	novelGene_29161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGCCAGGAATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	92124036	92125877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_92124000_92125900
ES.35817.1	chr9	-	206	1	Intergenic	novelGene_29162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGAAAGGTATGGATGG	NA	False	NA	NA	False	AATACA	-16	NA	92128812	92128606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_92128600_92128800
ES.35818.1	chr9	+	1614	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	433	255	-159	46	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGTTCCTGTTTCATTT	NA	False	NA	NA	False	TTTAAA	-7	NA	92132235	92154076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.10	chr9	+	3225	8	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-110	4	intron_retention	FALSE	canonical	1	104	junction_4	76.5868854335268	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132284	92154034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.11	chr9	+	10302	3	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-93	-10156	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	169	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	92132301	92143872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92138296_92138365_92140128_92141326
ES.35818.12	chr9	+	2129	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	513	-340	-79	340	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTATGCTGCACTAGC	NA	False	NA	NA	False	NA	NA	NA	92132315	92154671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.13	chr9	+	5164	8	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-73	4	intron_retention	FALSE	canonical	1	104	junction_3	79.4511786943301	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATGTTACTTTACAA	NA	False	NA	NA	False	NA	NA	NA	92132321	92154034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.14	chr9	+	3227	7	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-16	0	intron_retention	FALSE	canonical	1	104	junction_4	82.7192373164926	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	92132378	92154030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92148927_92151867_92152030_92153581
ES.35818.15	chr9	+	2044	9	NNC	ENSMUSG00000032369.14	novel	1471	9	NA	NA	22	287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.466173969619	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTGGGCTTCAGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	92132416	92154618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92132483_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.2	chr9	+	1476	9	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	105.636168048638	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAGTTGATGTTACT	NA	False	NA	NA	False	NA	NA	NA	92132245	92154028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145251_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.3	chr9	+	1852	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	448	2	-144	-2	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACGTTTGGCTCCTGTA	NA	False	NA	NA	False	TATAAA	-21	NA	92132250	92154329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.4	chr9	+	1293	8	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-131	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	111.298642197926	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAGTTGATGTTACT	NA	False	NA	NA	False	NA	NA	NA	92132263	92154028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92141408_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.5	chr9	+	4479	8	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-129	0	intron_retention	FALSE	canonical	1	104	junction_4	82.1114225567047	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	92132265	92154030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92152030_92153581
ES.35818.6	chr9	+	2392	1	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-127	-19369	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATATTAATGTAAAATC	NA	False	NA	NA	False	NA	NA	NA	92132267	92134659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132300_92134700
ES.35818.7	chr9	+	2894	8	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-122	-3	intron_retention	FALSE	canonical	3	193	junction_4	46.6734203081937	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAAAAGAGTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	92132272	92154025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ES.35818.8	chr9	+	1526	9	NNC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-116	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	137.666036116393	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAAAGAGTTGATGTTA	NA	False	NA	NA	False	NA	NA	NA	92132278	92154026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145330_92146698_92146742_92148443_92148671_92148764_92148927_92151867_92152030_92153581
ES.35819.1	chr9	-	2167	1	Antisense	novelGene_ENSMUSG00000032369.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGAACCTGACAAGA	NA	False	NA	NA	False	NA	NA	NA	92147673	92145506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_92145500_92147700
ES.3582.1	chr10	-	3046	20	NIC	ENSMUSG00000020014.19	novel	1794	12	NA	NA	-4	30	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	0.223296878269436	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTACCTTATCATGGTC	NA	False	NA	NA	False	NA	NA	NA	92917484	92857542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_92857932_92860874_92860997_92861312_92861400_92864453_92864581_92864901_92865031_92868747_92868825_92870532_92870684_92871280_92871416_92873675_92873759_92874674_92874841_92874929_92875112_92879090_92879290_92880888_92880991_92881115_92881230_92883795_92883940_92897323_92897383_92900942_92901115_92902568_92902713_92905690_92905797_92917126
ES.35820.1	chr9	+	1096	7	NNC	ENSMUSG00000074139.9	novel	842	5	NA	NA	-12833	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGTGTTTGGCTTTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	92212724	92239927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92212850_92225503_92225737_92229854_92229898_92232978_92233200_92235519_92235659_92236597_92236760_92239754
ES.35821.1	chr9	+	3751	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	-102	0	-102	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424173	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.10	chr9	+	3344	19	NNC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	19.4133084045424	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424509	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92424622_92453307_92453400_92455523_92455590_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.11	chr9	+	3475	20	NNC	ENSMUSG00000032374.15	novel	3663	20	NA	NA	203	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3382655450413	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGTGCCTCTCTGTC	NA	False	NA	NA	False	NA	NA	NA	92424519	92490478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92424622_92439145_92439219_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.12	chr9	+	4987	15	NIC	ENSMUSG00000032374.15	novel	3663	20	NA	NA	7742	-16	intron_retention	FALSE	canonical	3	58	junction_7	8.9019603436088	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAATTTAAAA	5541	False	NA	NA	False	NA	NA	NA	92463382	92490457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.13	chr9	+	8866	2	NIC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	-1964	0	intron_retention	FALSE	canonical	3	81	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92481430	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92488943_92489127
ES.35821.2	chr9	+	3526	18	NIC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	-3	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	20.1059477505562	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	92424272	92490457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.4	chr9	+	7664	18	NNC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_12	20.3022149233981	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424313	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92482465_92482503_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.5	chr9	+	6216	17	NIC	ENSMUSG00000032374.15	novel	3663	20	NA	NA	-2	13	intron_retention	FALSE	canonical	3	58	junction_10	9.82801321478558	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTATTGGTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	92424314	92490494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92485115_92486831_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.6	chr9	+	3671	20	FSM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	0	-8	0	0	multi-exon	FALSE	canonical	2	5	junction_13	23.4907891420283	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424316	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.7	chr9	+	2631	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	41	977	0	-969	multi-exon	FALSE	canonical	3	58	junction_10	9.44264688775947	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTTGGTATTTATTT	NA	False	NA	NA	False	AAGAAA	-16	NA	92424316	92489504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.8	chr9	+	5091	19	NNC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	25.7377562884847	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424317	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473362_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92483506_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ES.35821.9	chr9	+	3434	20	NNC	ENSMUSG00000032374.15	novel	3649	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	19.4852028522647	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424320	92490481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127_92489254_92489423
ES.35822.1	chr9	-	2684	1	FSM	ENSMUSG00000103622.2	ENSMUST00000191720.2	4069	1	408	977	408	-977	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGTTTGTATAGC	NA	False	NA	NA	False	AATATA	-17	NA	92424514	92421830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_92421800_92424500
ES.35823.1	chr9	-	6704	1	Intergenic	novelGene_29163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAAAATCTGTATGTT	241	False	NA	NA	False	NA	NA	NA	92436291	92429587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_92429600_92436300
ES.35823.2	chr9	-	2017	3	Antisense	novelGene_ENSMUSG00000032374.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGCAATCCTGCAAGC	241	False	NA	NA	False	NA	NA	NA	92436291	92434051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_92435706_92435743_92435804_92435988
ES.35823.3	chr9	-	2196	2	Antisense	novelGene_ENSMUSG00000032374.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGGCAAAGCAATCCT	241	False	NA	NA	False	NA	NA	NA	92436291	92434057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_92435706_92435743
ES.35824.1	chr9	-	6785	1	Antisense	novelGene_ENSMUSG00000032374.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	92455368	92448583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_92448600_92455400
ES.35825.1	chr9	+	183	1	Intergenic	novelGene_29164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAAAAGAATCT	NA	False	NA	NA	False	NA	NA	NA	92848757	92848940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_92848800_92848900
ES.35826.1	chr9	+	2945	1	Intergenic	novelGene_29165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAGACAATATCAAA	NA	False	NA	NA	False	GATAAA	-35	NA	92902856	92905801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_92902900_92905800
ES.35827.1	chr9	+	3788	1	Intergenic	novelGene_29166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	93205908	93209696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_93205900_93209700
ES.35828.1	chr9	-	1213	1	Intergenic	novelGene_29167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGGCTTTTTGGTA	NA	False	NA	NA	False	TATAAA	-22	NA	93317907	93316694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_93316700_93317900
ES.35829.1	chr9	-	4260	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-291	-19	-291	19	multi-exon	FALSE	canonical	3	138	junction_2	1.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCAAGTTTTTCTTG	NA	False	NA	18	True	AATAAA	-39	NA	94420425	94399897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_94402700_94406444_94406749_94419271
ES.35829.10	chr9	-	2576	2	ISM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-248	5367	-248	-5367	5prime_fragment	FALSE	canonical	3	138	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAAATTGTTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	94420382	94405283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_94406749_94419271
ES.35829.2	chr9	-	3912	3	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.5	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	94420133	94399916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94402700_94406444_94406712_94419271
ES.35829.3	chr9	-	3880	4	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.7723346096214	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGCTACTCTGTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	94420134	94399918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94402700_94406444_94406749_94419271_94419524_94419591
ES.35829.4	chr9	-	3881	3	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGCTACTCTGTCTT	NA	False	NA	-3	True	AATAAA	-18	NA	94420094	94399918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94402689_94406460_94406749_94419271
ES.35829.5	chr9	-	3726	4	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7723346096214	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTGGCTACTCTGTCT	NA	False	NA	-4	True	AATAAA	-17	NA	94420132	94399919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94400756_94400974_94402700_94406444_94406749_94419271
ES.35829.6	chr9	-	3803	4	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7723346096214	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTGGCTACTCTGTCT	NA	False	NA	-4	True	AATAAA	-17	NA	94420099	94399919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94402151_94402259_94402700_94406444_94406749_94419271
ES.35829.7	chr9	-	3896	4	NNC	ENSMUSG00000045414.8	novel	3950	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7723346096214	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTTTGGCTACTCTGTC	NA	False	NA	-5	True	AATAAA	-16	NA	94420135	94399920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_94402619_94402669_94402700_94406444_94406749_94419271
ES.35829.8	chr9	-	3147	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	-233	1036	-233	-1036	multi-exon	FALSE	canonical	3	138	junction_2	1.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCCTTCTCATTCATT	NA	False	NA	4	True	ATTAAA	-21	NA	94420367	94400952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_94402700_94406444_94406749_94419271
ES.3583.1	chr10	+	154	1	Intergenic	novelGene_2739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	92937003	92937157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_92937000_92937200
ES.35830.1	chr9	-	173	1	Intergenic	novelGene_29168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGGGTTTATCC	NA	False	NA	NA	False	NA	NA	NA	94424737	94424564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_94424600_94424700
ES.35831.1	chr9	-	183	1	Intergenic	novelGene_29169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAATAATAAAGGG	NA	False	NA	NA	False	NA	NA	NA	94544681	94544498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_94544500_94544700
ES.35832.1	chr9	+	2265	1	FSM	ENSMUSG00000103755.2	ENSMUST00000192612.2	1094	1	-1162	-9	-1162	9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACTGGTTTGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	95288351	95290616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95288400_95290600
ES.35833.1	chr9	-	2784	1	ISM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	898	3749	898	-3749	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGCAGCTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	95287877	95285093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_95285100_95287900
ES.35833.2	chr9	-	3152	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	-634	4810	-634	-4810	multi-exon	FALSE	canonical	3	17	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTCTTTTTATATTTG	NA	False	NA	-20	True	AATAAA	-13	NA	95289409	95286154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95288527_95288629
ES.35833.3	chr9	-	2883	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	-563	5008	-563	-5008	multi-exon	FALSE	canonical	3	17	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTACAAAATTTTCG	NA	False	NA	NA	False	GATAAA	-21	NA	95289338	95286352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95288527_95288629
ES.35834.1	chr9	-	5913	1	Intergenic	novelGene_29170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACCACTGCTTGTGGC	NA	False	NA	NA	False	AATAAA	-27	NA	95325611	95319698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95319700_95325600
ES.35835.1	chr9	+	2661	1	Intergenic	novelGene_29171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACCAGAAGAAGAGGC	NA	False	NA	NA	False	NA	NA	NA	95330935	95333596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95330900_95333600
ES.35836.1	chr9	+	10057	1	Antisense	novelGene_ENSMUSG00000032407.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCAAGCACATTATTGTG	NA	False	NA	NA	False	NA	NA	NA	95334621	95344678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_95334600_95344700
ES.35836.2	chr9	+	5941	1	Antisense	novelGene_ENSMUSG00000032407.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCGTCAGGTCCAGGC	NA	False	NA	NA	False	CATAAA	-37	NA	95336315	95342256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_95336300_95342300
ES.35836.3	chr9	+	4295	1	Antisense	novelGene_ENSMUSG00000032407.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	95341011	95345306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_95341000_95345300
ES.35837.1	chr9	-	8326	27	NNC	ENSMUSG00000032407.15	novel	3231	27	NA	NA	-2	754	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	230.683894478131	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCTTAAACTCTGGTCT	8306	False	NA	NA	False	NA	NA	NA	95393934	95338196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.100	chr9	-	4161	25	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	16	-1	intron_retention	FALSE	canonical	0	0	junction_13	250.554797593704	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8208	False	NA	-2	True	AATAAA	-16	NA	95394032	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.101	chr9	-	3418	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	221.005609182077	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8302	False	NA	-2	True	AATAAA	-16	NA	95393938	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.102	chr9	-	4874	11	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	-1819	-1	intron_retention	FALSE	canonical	3	640	junction_9	55.6413515292359	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	NA	False	NA	-2	True	AATAAA	-16	NA	95366116	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144
ES.35837.103	chr9	-	3311	26	NNC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	264.852725868548	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8302	False	NA	-2	True	AATAAA	-16	NA	95393938	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375233_95375755_95375871_95377887_95377987_95393869
ES.35837.104	chr9	-	3502	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	212.798081099468	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8280	False	NA	-2	True	AATAAA	-16	NA	95393960	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373491_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.105	chr9	-	3505	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	229.048811445708	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8303	False	NA	-2	True	AATAAA	-16	NA	95393937	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344927_95346443_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.106	chr9	-	3492	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	218.671323975034	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8303	False	NA	-2	True	AATAAA	-16	NA	95393937	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.107	chr9	-	3541	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	217.627165102149	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8303	False	NA	-2	True	AATAAA	-16	NA	95393937	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348592_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.108	chr9	-	3581	28	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	216.564648346816	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8312	False	NA	-2	True	AATAAA	-16	NA	95393928	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382927_95384592_95384638_95393869
ES.35837.11	chr9	-	7539	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-43	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGTGTGCTCTGTGG	8250	False	NA	-2	True	ATTAAA	-18	NA	95393990	95338949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.112	chr9	-	3514	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	217.473603399546	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8303	False	NA	-2	True	AATAAA	-16	NA	95393937	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366372_95366456_95366528_95367624_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.114	chr9	-	3443	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	254.585216328666	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTTGTTTTTTTGCC	8303	False	NA	-2	True	AATAAA	-16	NA	95393937	95343031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359488_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374441_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.115	chr9	-	2847	21	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	235.084000944343	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8303	False	NA	-3	True	AATAAA	-15	NA	95393937	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95393869
ES.35837.117	chr9	-	3518	24	NNC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	276.716126643897	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8321	False	NA	-3	True	AATAAA	-15	NA	95393919	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393866
ES.35837.118	chr9	-	3508	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	217.703558781598	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8323	False	NA	-3	True	AATAAA	-15	NA	95393917	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359569_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.122	chr9	-	5885	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_12	170.935422423362	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8171	False	NA	-3	True	AATAAA	-15	NA	95394069	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.123	chr9	-	3556	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	227.853808448951	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8303	False	NA	-3	True	AATAAA	-15	NA	95393937	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357369_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.13	chr9	-	7643	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	216.242516145072	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGTGTGCTCTGTGG	8296	False	NA	-2	True	ATTAAA	-18	NA	95393944	95338949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357369_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.130	chr9	-	3359	27	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	306.579931564135	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8312	False	NA	-3	True	AATAAA	-15	NA	95393928	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372299_95373143_95373223_95373320_95373354_95373445_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377977_95384592_95384638_95393869
ES.35837.131	chr9	-	3565	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	227.365806304605	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAATGTTGTTTTTTTGC	8303	False	NA	-3	True	AATAAA	-15	NA	95393937	95343032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366195_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.132	chr9	-	3520	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.267495545747	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8303	False	NA	-7	True	AATAAA	-11	NA	95393937	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343582_95344751_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.135	chr9	-	3509	27	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	261.912043707526	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8303	False	NA	-7	True	AATAAA	-11	NA	95393937	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346529_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382899_95393869
ES.35837.137	chr9	-	3510	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	214.655189734862	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8302	False	NA	-7	True	AATAAA	-11	NA	95393938	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382851_95384592_95384638_95393869
ES.35837.138	chr9	-	3506	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	215.804349230446	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8303	False	NA	-7	True	AATAAA	-11	NA	95393937	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366247_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.143	chr9	-	3382	27	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	244.269990793726	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8313	False	NA	-7	True	AATAAA	-11	NA	95393927	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366521_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.144	chr9	-	4442	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_13	170.963840081418	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8302	False	NA	-7	True	AATAAA	-11	NA	95393938	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.145	chr9	-	3489	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	214.870457740164	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8300	False	NA	-7	True	AATAAA	-11	NA	95393940	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95393869
ES.35837.146	chr9	-	3203	16	NNC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	-7458	-6	intron_retention	FALSE	non_canonical	0	0	junction_8	264.942878539675	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	NA	False	NA	-7	True	AATAAA	-11	NA	95371755	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358326_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798
ES.35837.147	chr9	-	3717	11	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	-690	-6	intron_retention	FALSE	canonical	3	640	junction_9	60.4864447624424	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	NA	False	NA	-7	True	AATAAA	-11	NA	95364987	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95359576_95361319_95361408_95363705_95363786_95364144
ES.35837.148	chr9	-	3562	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	281.790824171238	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8329	False	NA	-7	True	AATAAA	-11	NA	95393911	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95379245_95379347_95382740_95382873_95384592_95384638_95393869
ES.35837.149	chr9	-	3564	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-1944	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	212.096297719156	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8748	False	NA	-7	True	AATAAA	-11	NA	95395993	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95395892
ES.35837.150	chr9	-	3258	26	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	279.571397678661	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8312	False	NA	-7	True	AATAAA	-11	NA	95393928	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359488_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.151	chr9	-	3344	26	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	255.286148468733	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8309	False	NA	-7	True	AATAAA	-11	NA	95393931	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354252_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95393869
ES.35837.152	chr9	-	3356	26	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	246.374589598846	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATAATGTTGTTTTT	8302	False	NA	-7	True	AATAAA	-11	NA	95393938	95343036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.156	chr9	-	3510	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.048811445708	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTATAATGTTGTTTT	8320	False	NA	-8	True	AATAAA	-10	NA	95393920	95343037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346421_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.157	chr9	-	5276	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_12	187.685277295822	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTATAATGTTGTTT	8303	False	NA	-9	True	AATAAA	-9	NA	95393937	95343038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.159	chr9	-	2340	17	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	244.438642607915	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTATAATGTTGTTT	8302	False	NA	-9	True	AATAAA	-9	NA	95393938	95343038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95375806_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.16	chr9	-	7797	30	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	320.370193123662	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTGTGCTCTGTG	8309	False	NA	-3	True	ATTAAA	-17	NA	95393931	95338950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358334_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95368782_95368851_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95379245_95379347_95382740_95382873_95384592_95384638_95393869
ES.35837.164	chr9	-	3520	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	217.473603399546	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAAACTATAATGTTG	8303	False	NA	-12	True	AATAAA	-6	NA	95393937	95343041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367619_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.165	chr9	-	3351	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	10	4269	1	187	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTCTCAAGATGAAAT	8303	False	NA	NA	False	TATAAA	-16	NA	95393937	95343219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.166	chr9	-	3204	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	112	204	1	172	multi-exon	FALSE	canonical	0	0	junction_13	216.387107234962	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTTGTTGTGGCTGTT	8303	False	NA	NA	False	TATAAA	-1	NA	95393937	95343234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.167	chr9	-	4557	23	ISM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	9	15374	0	5756	5prime_fragment	FALSE	canonical	0	0	junction_8	200.454751597503	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAAAATACTAGGTT	8302	False	NA	NA	False	AATAAA	-13	NA	95393938	95354324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.168	chr9	-	4333	1	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	-63	53	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	791	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGACAGAGAACCTTAG	NA	False	NA	NA	False	NA	NA	NA	95364360	95360027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95360000_95364400
ES.35837.169	chr9	-	4434	2	FSM	ENSMUSG00000032407.15	ENSMUST00000186139.2	3858	2	-542	-34	-542	34	multi-exon	FALSE	canonical	3	767	junction_1	0	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAACAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	95364839	95360046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95363786_95364144
ES.35837.17	chr9	-	8515	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_13	170.963840081418	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTGTGCTCTGTG	8315	False	NA	-3	True	ATTAAA	-17	NA	95393925	95338950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.170	chr9	-	1681	4	ISM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	27605	16623	-2036	0	internal_fragment	FALSE	canonical	3	640	junction_1	87.8723822116799	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95366333	95360080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_95361408_95363705_95363786_95364144_95364308_95366222
ES.35837.171	chr9	-	3046	12	ISM	ENSMUSG00000032407.15	ENSMUST00000191213.7	3231	27	117	26547	1	5207	5prime_fragment	FALSE	canonical	3	304	junction_3	170.750651899098	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGAGAGGCCTCTTTTT	8309	False	NA	NA	False	AATAAA	-15	NA	95393931	95369953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.172	chr9	-	181	1	Intergenic	novelGene_29172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	760	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTTGAACT	NA	False	NA	NA	False	NA	NA	NA	95373054	95372873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95372900_95373100
ES.35837.173	chr9	-	2856	1	FSM	ENSMUSG00000032407.15	ENSMUST00000188017.2	2846	1	-5	-5	1	5	mono-exon	FALSE	NA	NA	NA	NA	NA	705	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATTTTGCCAGGCAG	8303	False	NA	NA	False	TATAAA	-20	NA	95393937	95391081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95391100_95393900
ES.35837.18	chr9	-	7431	26	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	246.374589598846	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTGTGCTCTGTG	8313	False	NA	-3	True	ATTAAA	-17	NA	95393927	95338950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.21	chr9	-	7439	26	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	217.799298437805	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTTGGTGTGCTCTGT	8303	False	NA	-4	True	ATTAAA	-16	NA	95393937	95338951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95393869
ES.35837.23	chr9	-	6733	5	ISM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	38171	1	8521	-1	3prime_fragment	FALSE	canonical	3	677	junction_3	63.7078291891978	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTTGGTGTGCTCTGT	NA	False	NA	-4	True	ATTAAA	-16	NA	95355776	95338951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095
ES.35837.24	chr9	-	7717	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_13	167.904580714321	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAACTTGGTGTGCTCTGT	8296	False	NA	-4	True	ATTAAA	-16	NA	95393944	95338951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.27	chr9	-	6084	4	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	9682	-648	intron_retention	FALSE	canonical	3	677	junction_2	62.2700213229091	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTGTATACTGTTTT	NA	False	NA	NA	False	AATAAA	-38	NA	95354615	95339598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95344933_95346415_95346535_95348598_95348710_95354095
ES.35837.28	chr9	-	6963	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-5	-3847	4	-660	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTATGTAATTTTCT	8297	False	NA	NA	False	AATAAA	-26	NA	95393943	95339610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.3	chr9	-	8482	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-7	747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	167.860448931548	902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAACGTTTCTTAAACT	8184	False	NA	NA	False	NA	NA	NA	95394056	95338203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.30	chr9	-	6919	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	17	-3416	16	-664	multi-exon	FALSE	canonical	0	0	junction_13	216.387107234962	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTGCTTATGTAATT	8208	False	NA	NA	False	AATAAA	-22	NA	95394032	95339614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.34	chr9	-	7860	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-667	intron_retention	FALSE	canonical	0	0	junction_13	170.963840081418	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGACTGCTTATGTA	8303	False	NA	NA	False	AATAAA	-19	NA	95393937	95339617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.35	chr9	-	6948	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	2	-667	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	184.18480907976	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGACTGCTTATGTA	8304	False	NA	NA	False	AATAAA	-19	NA	95393936	95339617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366389_95366466_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.37	chr9	-	6906	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	-667	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	218.671323975034	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGACTGCTTATGTA	8303	False	NA	NA	False	AATAAA	-19	NA	95393937	95339617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.39	chr9	-	6386	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	-3275	0	-1232	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGTTTTTGGAAT	8302	False	NA	NA	False	AATAAA	-24	NA	95393938	95340182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.4	chr9	-	8181	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	10	-561	1	561	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAGCATCCTGTAGTT	8303	False	NA	NA	False	AATAAA	-14	NA	95393937	95338389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.40	chr9	-	6118	26	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	36	-1397	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	217.799298437805	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCATTTTCAAAATAAGCT	8228	False	NA	NA	False	AATAAA	-20	NA	95394012	95340347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95393869
ES.35837.41	chr9	-	6220	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	-3110	1	-1397	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCATTTTCAAAATAAGCT	8303	False	NA	NA	False	AATAAA	-20	NA	95393937	95340347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.42	chr9	-	6182	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	16	-1398	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCATTTTCAAAATAAGC	8208	False	NA	NA	False	AATAAA	-19	NA	95394032	95340348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.45	chr9	-	4509	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	-1399	1	972	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCATGTCTTTTCCTTA	8303	False	NA	NA	False	NA	NA	NA	95393937	95342058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.47	chr9	-	3954	26	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	1	591	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	229.634164705516	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAACATCCAATGGTT	8303	False	NA	-6	True	AATAAA	-28	NA	95393937	95342439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95393869
ES.35837.49	chr9	-	4245	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-123	-1011	-12	584	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGCAATTTTAACATCC	8179	False	NA	-13	True	AATAAA	-21	NA	95394061	95342446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.5	chr9	-	7650	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-23	-4516	-14	9	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTGTGGTCTCTTTA	8279	False	NA	6	True	ATTAAA	-26	NA	95393961	95338941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.53	chr9	-	4141	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	583	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	229.070645802066	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGCAATTTTAACATC	8303	False	NA	-14	True	AATAAA	-20	NA	95393937	95342447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370861_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.54	chr9	-	4143	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-43	583	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGCAATTTTAACATC	8148	False	NA	-14	True	AATAAA	-20	NA	95394092	95342447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.56	chr9	-	5039	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-3	579	intron_retention	FALSE	canonical	0	0	junction_13	170.963840081418	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8290	False	NA	-18	True	AATAAA	-16	NA	95393950	95342451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.57	chr9	-	4109	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	216.722620188823	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8303	False	NA	-18	True	AATAAA	-16	NA	95393937	95342451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358166_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.60	chr9	-	4161	28	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	4	579	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	216.564648346816	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8312	False	NA	-18	True	AATAAA	-16	NA	95393928	95342451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382927_95384592_95384638_95393869
ES.35837.63	chr9	-	4087	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	2	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	214.655189734862	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8310	False	NA	-18	True	AATAAA	-16	NA	95393930	95342451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382851_95384592_95384638_95393869
ES.35837.64	chr9	-	4184	29	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	250.842112305973	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8303	False	NA	-18	True	AATAAA	-16	NA	95393937	95342451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95368782_95368851_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.66	chr9	-	4014	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	-9	574	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	232.92484248899	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTTTTCAGGCAAT	8284	False	NA	-23	True	AATAAA	-11	NA	95393956	95342456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.67	chr9	-	4208	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	-13	574	intron_retention	FALSE	canonical	3	570	junction_18	88.127101930533	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTTTTCAGGCAAT	8280	False	NA	-23	True	AATAAA	-11	NA	95393960	95342456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.68	chr9	-	4100	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	5	574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	261.002835443869	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTTTTCAGGCAAT	8313	False	NA	-23	True	AATAAA	-11	NA	95393927	95342456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370861_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382851_95384592_95384638_95393869
ES.35837.69	chr9	-	4068	27	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	574	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	218.671323975034	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTTTTCAGGCAAT	8302	False	NA	-23	True	AATAAA	-11	NA	95393938	95342456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.7	chr9	-	7600	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	214.655189734862	901	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTCTGTGGTCT	8302	False	NA	1	True	ATTAAA	-21	NA	95393938	95338946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382851_95384592_95384638_95393869
ES.35837.70	chr9	-	4103	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	569	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	212.798081099468	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAACGGTTTTCAG	8303	False	NA	-28	True	AATAAA	-6	NA	95393937	95342461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373357_95373440_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.71	chr9	-	4260	30	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	3	565	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	298.311032409254	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAAAATTAAACGGTTT	8311	False	NA	-32	True	AATAAA	-2	NA	95393929	95342465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95364426_95364521_95366222_95366387_95366456_95366528_95367613_95367719_95368782_95368851_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.76	chr9	-	3893	28	NNC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	557	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.796910650722	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTGAAAAATTA	8303	False	NA	-40	True	NA	NA	NA	95393937	95342473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354144_95354215_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.77	chr9	-	4188	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	1	557	intron_retention	FALSE	canonical	0	0	junction_13	167.904580714321	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTGAAAAATTA	8303	False	NA	-40	True	NA	NA	NA	95393937	95342473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.78	chr9	-	4111	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	217.704812669664	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTGAAAAATTA	8303	False	NA	-40	True	NA	NA	NA	95393937	95342473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358334_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.80	chr9	-	5121	26	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	5	557	intron_retention	FALSE	non_canonical	0	0	junction_2	261.432864039699	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTGAAAAATTA	8313	False	NA	-40	True	NA	NA	NA	95393927	95342473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344929_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366461_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.81	chr9	-	5186	26	NIC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	557	intron_retention	FALSE	canonical	0	0	junction_12	222.995784713523	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTGAAAAATTA	8303	False	NA	-40	True	NA	NA	NA	95393937	95342473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.84	chr9	-	3955	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	9	3666	0	414	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATAGAATTCTTTTG	8302	False	NA	NA	False	TATAAA	-16	NA	95393938	95342616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.86	chr9	-	3549	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	217.445463260229	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTTTTTTTGCCCAG	8311	False	NA	1	True	AATAAA	-19	NA	95393929	95343028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370861_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.87	chr9	-	3691	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	-151	-429	-40	2	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTTTTTTTGCCCAG	8151	False	NA	1	True	AATAAA	-19	NA	95394089	95343028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.88	chr9	-	3570	29	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	250.842112305973	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTGTTTTTTTGCCCA	8312	False	NA	0	True	AATAAA	-18	NA	95393928	95343029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95368166_95368208_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.89	chr9	-	3541	28	NNC	ENSMUSG00000032407.15	novel	3111	28	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	254.942506765408	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTGTTTTTTTGCCCA	8303	False	NA	0	True	AATAAA	-18	NA	95393937	95343029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344927_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358326_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ES.35837.9	chr9	-	6150	2	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	17718	4	intron_retention	FALSE	canonical	3	764	junction_1	0	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTCTGTGGTCT	NA	False	NA	1	True	ATTAAA	-21	NA	95346579	95338946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95344933_95346415
ES.35837.95	chr9	-	3524	27	NIC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8184	False	NA	-1	True	AATAAA	-17	NA	95394056	95343030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.97	chr9	-	3426	27	NNC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	252.561375749955	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8303	False	NA	-1	True	AATAAA	-17	NA	95393937	95343030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357369_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35837.98	chr9	-	3395	27	NNC	ENSMUSG00000032407.15	novel	3520	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	244.680195212024	858	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8303	False	NA	-1	True	AATAAA	-17	NA	95393937	95343030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358307_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ES.35838.1	chr9	-	140	1	Intergenic	novelGene_29173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGTCTTAACTGCAT	3970	False	NA	NA	False	NA	NA	NA	95403803	95403663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95403700_95403800
ES.35839.1	chr9	+	634	4	Intergenic	novelGene_29174	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	7.07106781186548	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTGGAACTCATATGT	NA	False	NA	NA	False	AATAAA	-18	NA	95405431	95409451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95405466_95406451_95406766_95408952_95409053_95409265
ES.3584.1	chr10	+	176	1	Intergenic	novelGene_2740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACTACTCCTATG	NA	False	NA	NA	False	NA	NA	NA	92968313	92968489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_92968300_92968500
ES.35840.1	chr9	+	2455	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	-59	5971	-59	-5971	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTGGTCCTCAAACG	NA	False	NA	NA	False	AATAAA	-23	NA	95441650	95444105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95441600_95444100
ES.35841.1	chr9	+	5434	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	2932	1	2932	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAGGACTGGATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	95444641	95450075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95444600_95450100
ES.35842.1	chr9	+	1144	2	Intergenic	novelGene_29175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATGAATGCCTAT	NA	False	NA	NA	False	AATAAA	-9	NA	95470385	95476135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95470620_95475225
ES.35843.1	chr9	+	170	1	Intergenic	novelGene_29176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATTAAACCTTG	4200	False	NA	NA	False	NA	NA	NA	95515478	95515648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95515500_95515600
ES.35844.1	chr9	+	2086	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	-183	2535	-183	878	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACCTTGTTCTCCCAGA	8192	False	NA	NA	False	AATAAA	-28	NA	95519470	95577614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.10	chr9	+	1581	2	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	236	57901	236	-54488	5prime_fragment	FALSE	canonical	3	310	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAGAAAAAGAAA	8611	False	NA	NA	False	GGGGCT	-45	NA	95519889	95522248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95519927_95520704
ES.35844.11	chr9	+	1638	9	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	238	868	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	100.687325418843	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGCCAGATAACCTTG	8613	False	NA	NA	False	AATAAA	-18	NA	95519891	95577604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95519927_95520704_95520797_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.12	chr9	+	1719	9	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	434	866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.096691302902	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCAGCCAGATAACCT	8809	False	NA	NA	False	AATAAA	-16	NA	95520087	95577602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95520189_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.13	chr9	+	1753	9	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	542	865	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.096691302902	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8917	False	NA	NA	False	AATAAA	-15	NA	95520195	95577601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95520332_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.14	chr9	+	163	2	Antisense	novelGene_ENSMUSG00000100825.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACATATAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	95552452	95642695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_95552566_95642645
ES.35844.15	chr9	+	1254	6	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	40742	2548	-1963	865	3prime_fragment	FALSE	canonical	3	299	junction_5	9.35093578204877	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	355	False	NA	NA	False	AATAAA	-15	NA	95560395	95577601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.16	chr9	+	3692	4	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	46383	2548	3678	865	3prime_fragment	FALSE	canonical	3	299	junction_3	11.1455023315337	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	1566	False	NA	NA	False	AATAAA	-15	NA	95566036	95577601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.17	chr9	+	716	1	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	59773	7	17068	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGATATTCACATAATAC	NA	False	NA	NA	False	NA	NA	NA	95579426	95580142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95579400_95580100
ES.35844.2	chr9	+	2029	9	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	-71	866	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	101.227389450682	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCAGCCAGATAACCT	8304	False	NA	NA	False	AATAAA	-16	NA	95519582	95577602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576609_95576845_95577018
ES.35844.3	chr9	+	1303	6	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	64	865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	123.350881634466	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8439	False	NA	NA	False	AATAAA	-15	NA	95519717	95577601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563649_95577060
ES.35844.4	chr9	+	1673	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	118	2647	118	766	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGGTTACCTTCAAGC	8493	False	NA	NA	False	TATAAA	-18	NA	95519771	95577502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.5	chr9	+	1381	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	119	2938	119	475	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	8494	False	NA	NA	False	NA	NA	NA	95519772	95577211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.7	chr9	+	3361	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	139	938	139	-938	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCTGTTAAATAATTAAC	8514	False	NA	NA	False	AATAAA	-24	NA	95519792	95579211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35844.8	chr9	+	1709	10	NNC	ENSMUSG00000015354.9	novel	4438	9	NA	NA	140	865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	97.1853263323275	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGCAGCCAGATAACC	8515	False	NA	NA	False	AATAAA	-15	NA	95519793	95577601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018_95577459_95577499
ES.35844.9	chr9	+	3446	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	174	818	174	-818	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGAGCTTTGATCC	8549	False	NA	NA	False	AATAAA	-11	NA	95519827	95579331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ES.35845.1	chr9	+	191	1	Intergenic	novelGene_29177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGGGGGCTAAA	NA	False	NA	NA	False	NA	NA	NA	95670137	95670328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95670100_95670300
ES.35846.1	chr9	-	5368	3	Antisense	novelGene_ENSMUSG00000015354.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGACAGTACGGAGAAG	NA	False	NA	NA	False	AATAAA	-35	NA	95582544	95575451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_95578767_95580019_95581911_95582382
ES.35847.1	chr9	-	4429	12	NIC	ENSMUSG00000032839.14	novel	2912	12	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.86904251601082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	95632406	95587136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608589_95614059_95614263_95625249_95625405_95631720
ES.35847.2	chr9	-	4531	13	NIC	ENSMUSG00000032839.14	novel	4559	13	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.97559517855952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	95632406	95587136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608589_95614059_95614263_95618872_95618975_95625249_95625405_95631720
ES.35847.3	chr9	-	4295	11	FSM	ENSMUSG00000032839.14	ENSMUST00000190604.7	2757	11	5	-1543	5	-2	multi-exon	FALSE	canonical	1	1	junction_5	2.90516780926679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	95632406	95587136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608610_95614059_95614263_95631720
ES.35847.4	chr9	-	4391	12	FSM	ENSMUSG00000032839.14	ENSMUST00000190497.2	2859	12	11	-1543	11	-2	multi-exon	TRUE	canonical	0	0	junction_11	3.06944418475166	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGATAGAGCTTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	95632400	95587136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95589021_95590253_95590449_95590698_95590901_95592168_95592345_95598135_95598280_95599572_95599713_95603185_95603523_95605147_95605344_95608477_95608610_95614059_95614263_95618872_95618975_95631720
ES.35848.1	chr9	-	4049	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	29	-374	29	374	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGTGATTGTTATAAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	95727310	95634320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
ES.35848.3	chr9	-	3700	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	4	0	4	0	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTATTTCATTTAA	NA	False	NA	2	True	AATAAA	-19	NA	95727335	95634694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
ES.35848.4	chr9	-	3772	17	NNC	ENSMUSG00000049493.14	novel	3704	16	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.586552276742	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTTGTGTTTATTTCA	NA	False	NA	-3	True	AATAAA	-14	NA	95727329	95634699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95636491_95636713_95636839_95642938_95643022_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
ES.35848.5	chr9	-	3771	17	NNC	ENSMUSG00000049493.14	novel	3704	16	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	21.6151531049401	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATTTGTGTTTATTTC	NA	False	NA	-4	True	AATAAA	-13	NA	95727317	95634700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95678327_95678423_95727223
ES.35848.6	chr9	-	2454	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	8	1242	8	-1242	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATAATCTCACTTAATCC	NA	False	NA	NA	False	ATTAAA	-18	NA	95727331	95635936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
ES.35848.7	chr9	-	178	1	Intergenic	novelGene_29178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACTTCGGT	NA	False	NA	NA	False	NA	NA	NA	95676954	95676776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95676800_95677000
ES.35848.8	chr9	-	2417	1	NIC	ENSMUSG00000049493.14	novel	3704	16	NA	NA	7	-57309	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	95727332	95724915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_95724900_95727300
ES.35849.1	chr9	+	5186	28	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	5	40937	5	4355	5prime_fragment	FALSE	canonical	3	80	junction_14	14.9254204491194	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTCTTTTTATTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	95739654	95792760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531
ES.35849.10	chr9	+	7985	47	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	32.6076811436388	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739705	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756320_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763484_95765200_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.11	chr9	+	8012	48	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	35.6161061424415	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739711	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95789979_95790046_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822970_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.12	chr9	+	5843	33	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	65	29752	-7	2761	5prime_fragment	FALSE	canonical	3	80	junction_14	14.6372811683044	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGTGTTTTTTGTTCT	NA	False	NA	NA	False	AATATA	-15	NA	95739714	95803945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705
ES.35849.13	chr9	+	9428	46	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-7	0	intron_retention	FALSE	canonical	3	80	junction_14	23.3747780077925	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739714	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.14	chr9	+	7912	46	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-7	19	combination_of_known_splicesites	FALSE	canonical	3	7	junction_36	28.0665874899912	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTACTAATCAGTGGT	NA	False	NA	28	True	AATAAA	-34	NA	95739714	95833716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.15	chr9	+	5086	28	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-6	4346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.4449494897321	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTGACATGTTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	95739715	95792751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747888_95748654_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531
ES.35849.16	chr9	+	7800	45	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-6	2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_19	32.1516936561463	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	11	True	AATAAA	-17	NA	95739715	95833699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.17	chr9	+	7987	47	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.4409397003632	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739715	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744990_95747027_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.18	chr9	+	5988	22	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-5	-2784	intron_retention	FALSE	canonical	2	11	junction_21	22.892036857255	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTGAATCTATAACATAC	NA	False	NA	NA	False	NA	NA	NA	95739716	95783307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
ES.35849.19	chr9	+	7349	42	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-5	382	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	23.9746048470642	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATATATTTCAGTGCCA	NA	False	NA	NA	False	AATATA	-19	NA	95739716	95823429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95823155
ES.35849.2	chr9	+	8045	47	FSM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	20	-9	20	9	multi-exon	TRUE	canonical	3	80	junction_14	23.1390654868948	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAAATCCATGTTACT	NA	False	NA	18	True	AATAAA	-24	NA	95739669	95833706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.20	chr9	+	7978	47	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.4253158686166	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739717	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743504_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.21	chr9	+	9454	45	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-3	-6	intron_retention	FALSE	canonical	0	0	junction_44	28.0226811914389	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95739718	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832708_95833503
ES.35849.22	chr9	+	6396	33	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	69	29195	-3	3318	5prime_fragment	FALSE	canonical	3	80	junction_14	14.6372811683044	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAACACAAGTCAAGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	95739718	95804502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705
ES.35849.23	chr9	+	4651	24	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-2	-2649	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_23	22.001804359758	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTGTAGCTCATGGT	NA	False	NA	NA	False	AATAAA	-14	NA	95739719	95783442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
ES.35849.26	chr9	+	7542	46	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.3595608456482	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCCATGTTACTAATC	NA	False	NA	22	True	AATAAA	-28	NA	95739721	95833710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747623_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.27	chr9	+	5032	28	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	0	4353	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	24.1313279297746	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGTTCTTTTTATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	95739721	95792758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748730_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531
ES.35849.28	chr9	+	7702	48	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.6402678785477	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGAATATATTAGTAAT	NA	False	NA	1	True	AATAAA	-7	NA	95739722	95833689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747623_95748635_95748676_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827294_95827396_95827551_95827928_95828075_95829142_95829295_95832597_95832704_95833503
ES.35849.29	chr9	+	9239	45	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_4	28.4933931010896	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATTAGTAATCTGAAA	NA	False	NA	7	True	AATAAA	-13	NA	95739722	95833695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.3	chr9	+	9599	47	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-13	1436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	25.9605633733482	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTGGCTTTTGTCCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	95739678	95835270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827297_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.30	chr9	+	8060	48	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.3790502831471	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95739725	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757175_95757262_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.33	chr9	+	9260	44	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_25	28.9426803400741	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739735	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.35	chr9	+	9277	44	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	16	-6	intron_retention	FALSE	canonical	0	0	junction_41	26.3075170169185	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95739737	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95829142_95829295_95832597_95832704_95833503
ES.35849.37	chr9	+	3713	1	FSM	ENSMUSG00000032409.16	ENSMUST00000186061.2	4101	1	408	-20	357	20	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTTGGTACCAACAC	NA	False	NA	NA	False	NA	NA	NA	95740115	95743828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95740100_95743800
ES.35849.38	chr9	+	7479	44	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	5189	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	29.319577793151	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95744947	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.39	chr9	+	7315	41	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	8942	-3	intron_retention	FALSE	canonical	3	7	junction_31	29.2790027152565	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATATTAGTAATCTGAA	NA	False	NA	6	True	AATAAA	-12	NA	95748700	95833694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.4	chr9	+	4545	24	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-7	-2784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	29.3331686424889	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTGAATCTATAACATAC	NA	False	NA	NA	False	NA	NA	NA	95739684	95783307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753492_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
ES.35849.40	chr9	+	8737	41	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	9055	-3	intron_retention	FALSE	canonical	3	80	junction_9	24.0384587692306	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATATTAGTAATCTGAA	NA	False	NA	6	True	AATAAA	-12	NA	95748813	95833694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.41	chr9	+	7164	42	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	9297	6	9188	-6	3prime_fragment	FALSE	canonical	3	80	junction_9	23.7751463669726	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95748946	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.42	chr9	+	6428	41	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	9801	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	29.9155477970904	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	11	True	AATAAA	-17	NA	95749559	95833699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.43	chr9	+	1919	13	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-14572	-2793	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	37.7635185507565	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGGTGTGAATCT	NA	False	NA	NA	False	NA	NA	NA	95756225	95783298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95775467_95775594_95779588_95779796_95781089_95781204_95783115
ES.35849.44	chr9	+	172	1	Intergenic	novelGene_29179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTAAAAGAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	95758301	95758473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_95758300_95758500
ES.35849.45	chr9	+	6069	32	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-7369	-4	intron_retention	FALSE	canonical	0	0	junction_5	37.3058344788084	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATATTAGTAATCTGA	NA	False	NA	5	True	AATAAA	-11	NA	95763428	95833693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95774546_95774576_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.46	chr9	+	4420	30	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-3366	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.5209161634385	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95767431	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787917_95789368_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.47	chr9	+	5392	26	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-6059	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	38.0694102922543	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95779657	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95823155_95824790_95827140_95827299_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.48	chr9	+	5498	24	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	40019	2508	-6048	-2508	internal_fragment	FALSE	canonical	3	94	junction_10	22.5558747518758	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGAGGCTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	95779668	95831189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142
ES.35849.5	chr9	+	7836	46	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	28.1851024479245	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAATCTGAAATCCA	NA	False	NA	11	True	AATAAA	-17	NA	95739692	95833699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.51	chr9	+	5457	19	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	54792	6	-2585	-6	3prime_fragment	FALSE	canonical	3	94	junction_3	23.4668139726016	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95794441	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.52	chr9	+	3255	18	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-477	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	37.8445189222528	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATTAGTAATCTGAAA	NA	False	NA	7	True	AATAAA	-13	NA	95796549	95833695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.53	chr9	+	2560	16	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	5365	-6	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	40.1915413986575	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95802391	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.54	chr9	+	1623	10	ISM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	78696	6	-877	-6	3prime_fragment	FALSE	canonical	3	103	junction_1	24.9612044660321	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	2820	False	NA	3	True	AATAAA	-9	NA	95818345	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.55	chr9	+	2819	8	NIC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	432	-6	intron_retention	FALSE	canonical	3	113	junction_1	23.892616911028	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	4129	False	NA	3	True	AATAAA	-9	NA	95819654	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95819702_95821202_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.6	chr9	+	7957	47	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	28.3881748058778	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATATATTAGTAATCT	NA	False	NA	3	True	AATAAA	-9	NA	95739694	95833691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792706_95797032_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.7	chr9	+	4537	24	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	-4	-2784	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_23	22.001804359758	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTGAATCTATAACATAC	NA	False	NA	NA	False	NA	NA	NA	95739698	95783307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
ES.35849.8	chr9	+	10650	44	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_38	36.5544852898793	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739702	95833697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95823155_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.35849.9	chr9	+	8117	48	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	32.1602765247374	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATATTAGTAATCTGAA	NA	False	NA	6	True	AATAAA	-12	NA	95739704	95833694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95823155_95823275_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ES.3585.1	chr10	+	4437	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-264	-14	-249	14	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTTCTTTATTGGG	NA	False	NA	29	True	TATAAA	-16	NA	92996487	93077204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.10	chr10	+	3895	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-198	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	86.7087955452819	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGGAGTCACTGTT	NA	False	NA	19	True	TATAAA	-6	NA	92996538	93077194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93017472_93017536_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.11	chr10	+	4261	5	ISM	ENSMUSG00000020015.11	ENSMUST00000215495.2	1388	7	-197	4113	-197	-4113	5prime_fragment	FALSE	canonical	3	223	junction_1	22.7431308310883	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAATAGTGTTGTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	92996539	93057117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825
ES.3585.12	chr10	+	2396	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-194	9362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	86.4501776631667	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGTTTGAGAGTGCTT	NA	False	NA	NA	False	AAGAAA	-18	NA	92996542	93086552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93077547_93077648_93086339
ES.3585.14	chr10	+	3524	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-193	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.0764198042054	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTTGTTTTGAAATTT	NA	False	NA	-35	True	TATAAA	-17	NA	92996543	93077140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92996814_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.16	chr10	+	3085	16	ISM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-207	1281	-192	-1281	intron_retention	FALSE	canonical	3	223	junction_1	19.4712323413	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGACTGCTGCATTTT	NA	False	NA	NA	False	NA	NA	NA	92996544	93075909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.17	chr10	+	3850	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-191	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.0562797720582	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCACTGTTCTTTATTG	NA	False	NA	27	True	TATAAA	-14	NA	92996545	93077202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047105_93047185_93047834_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.18	chr10	+	5425	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-191	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	86.6243131360796	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996545	93077203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93069029_93069268_93070194_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.2	chr10	+	3876	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-246	-15	-231	15	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTCTTTATTGGGG	NA	False	NA	30	True	TATAAA	-17	NA	92996505	93077205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.20	chr10	+	3749	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-190	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	65.3298259539205	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTTCTTTATTGGG	NA	False	NA	29	True	TATAAA	-16	NA	92996546	93077204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449_93075493_93075577
ES.3585.23	chr10	+	5826	16	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-58	-1195	intron_retention	FALSE	non_canonical	0	0	junction_11	91.2622594504431	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATTTTAGCTTTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	92996678	93075995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047680_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93069029_93069268_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.24	chr10	+	3291	17	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-46	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.0764198042054	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996690	93077203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92996738_93044106_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.25	chr10	+	6076	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	75	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	66.3841801561185	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGATTTTTGTGGAG	NA	False	NA	11	True	ACTAAA	-15	NA	92996826	93077186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93058969_93059720_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.26	chr10	+	1881	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	211	681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	86.4501776631667	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGCTTCTCAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	92996962	93077871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93077547_93077648_93077753
ES.3585.27	chr10	+	177	1	FSM	ENSMUSG00000089214.3	ENSMUST00000158589.3	119	1	100	-158	100	158	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	92998746	92998923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_92998700_92998900
ES.3585.28	chr10	+	3985	16	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-8676	2	intron_retention	FALSE	canonical	0	0	junction_1	68.6603880624694	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGTGGAGTCACTG	NA	False	NA	17	True	TATAAA	-4	NA	93034172	93077192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93034308_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.29	chr10	+	3422	17	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-8659	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0764198042054	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTGTGGAGTCAC	NA	False	NA	15	True	TATAAA	-2	NA	93034189	93077190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93034308_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.3	chr10	+	2652	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	-234	1197	-219	-1197	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATATTTTAGCTTTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	92996517	93075993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.30	chr10	+	3500	17	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-8631	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0764198042054	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGATTTTTGTGGAG	NA	False	NA	11	True	ACTAAA	-15	NA	93034217	93077186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93034418_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.31	chr10	+	2729	16	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-8624	-1312	intron_retention	FALSE	canonical	0	0	junction_1	68.6603880624694	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGAACGCATCTGTTT	NA	False	NA	NA	False	NA	NA	NA	93034224	93075878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93034418_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.32	chr10	+	3426	17	NNC	ENSMUSG00000020015.11	novel	3242	17	NA	NA	-8588	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	66.6152373241288	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTGTGGAGTCAC	NA	False	NA	15	True	TATAAA	-2	NA	93034260	93077190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93034383_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.33	chr10	+	4155	12	NNC	ENSMUSG00000020015.11	novel	698	4	NA	NA	14359	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	112.869485075272	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGATTTTTGTGGA	NA	False	NA	10	True	ACTAAA	-14	NA	93058520	93077185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93058837_93059524_93059680_93059720_93060913_93061885_93061981_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.34	chr10	+	4087	2	NIC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-2919	-57	intron_retention	FALSE	canonical	3	269	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCTTCATTTGTTTT	NA	False	NA	-42	True	TATAAA	-10	NA	93071965	93077133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93073747_93074827
ES.3585.4	chr10	+	5653	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-219	8023	intron_retention	FALSE	canonical	1	1	junction_16	66.5652875003181	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTCGTTCATTCTTA	NA	False	NA	NA	False	AAAAAG	-44	NA	92996517	93085213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93077648_93084410
ES.3585.5	chr10	+	7183	16	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-214	14	intron_retention	FALSE	non_canonical	0	0	junction_11	68.9840561289346	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTGTTCTTTATTGGG	NA	False	NA	29	True	TATAAA	-16	NA	92996522	93077204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93069029_93069184_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827
ES.3585.7	chr10	+	3972	18	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-204	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	86.4672268254215	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGATTTTTGTGGAG	NA	False	NA	11	True	ACTAAA	-15	NA	92996532	93077186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93070051_93070194_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.8	chr10	+	3768	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	66.0775763307796	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTGTGGAGTCAC	NA	False	NA	15	True	TATAAA	-2	NA	92996536	93077190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047834_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.3585.9	chr10	+	3934	17	NNC	ENSMUSG00000020015.11	novel	3615	17	NA	NA	-199	13	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	65.6229463964397	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACTGTTCTTTATTGG	NA	False	NA	28	True	TATAAA	-15	NA	92996537	93077203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_92997063_93044033_93044181_93047680_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ES.35850.1	chr9	-	1118	5	NNC	ENSMUSG00000097777.8	novel	2100	3	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCCTTTCTCAAATCA	8534	False	NA	NA	False	AATAAA	-19	NA	95836716	95824102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_95824760_95825416_95825479_95825668_95825793_95827914_95828154_95836680
ES.35851.1	chr9	+	3449	27	NIC	ENSMUSG00000032410.14	novel	6235	40	NA	NA	-10	6	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.5694455790205	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATTTCTTTCTTTGT	NA	False	NA	NA	False	AATATA	-41	NA	95836802	95893924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846109_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
ES.35851.10	chr9	+	1917	15	NNC	ENSMUSG00000032410.14	novel	3357	21	NA	NA	1	3947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.614955996359	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATATTTATTTTCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	95836813	95864333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95864117
ES.35851.11	chr9	+	7890	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	1	-2333	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	10.8501775727909	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTGTCAAAACTTTATT	NA	False	NA	13	True	ACTAAA	-21	NA	95836813	95937523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.12	chr9	+	7931	42	FSM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	7	-2439	0	-2337	multi-exon	FALSE	canonical	3	16	junction_37	10.9955915670048	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTTGTGTCAAAACTT	NA	False	NA	9	True	ACTAAA	-17	NA	95836819	95937519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.13	chr9	+	4025	32	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	7	25930	0	6589	5prime_fragment	FALSE	canonical	3	35	junction_24	7.7546937885659	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATTTTGGCATAATTT	NA	False	NA	NA	False	AGTAAA	-23	NA	95836819	95909150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890
ES.35851.14	chr9	+	3604	29	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	7	34740	0	-2221	5prime_fragment	FALSE	canonical	3	35	junction_24	7.40346030514083	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTTGTGTTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	95836819	95900340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099
ES.35851.15	chr9	+	4116	29	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	12	34223	5	-1704	5prime_fragment	FALSE	canonical	3	35	junction_24	7.40346030514083	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGATTTTAGTTAATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	95836824	95900857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099
ES.35851.16	chr9	+	10258	42	FSM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	13	-4772	6	-4	multi-exon	FALSE	canonical	3	16	junction_37	10.9955915670048	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACACTGCTGCTTTGCTT	NA	False	NA	21	True	ATTAAA	-21	NA	95836825	95939852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.17	chr9	+	10117	41	NIC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	12.5378427171503	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTGCTGCTTTGCTTGTC	NA	False	NA	24	True	ATTAAA	-24	NA	95836825	95939855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.18	chr9	+	9988	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	6	262	6	-262	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTTGTGCTCATTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	95836825	95939594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.19	chr9	+	4349	26	NIC	ENSMUSG00000032410.14	novel	6235	40	NA	NA	0	979	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	12.068736470733	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95836845	95894897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888753_95888901_95893263_95893354_95893576
ES.35851.2	chr9	+	3542	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	-10	41149	-10	13	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTCTTTGTAATAGTT	NA	False	NA	NA	False	NA	NA	NA	95836802	95893931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
ES.35851.20	chr9	+	3259	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	33	41389	0	-227	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGTTGAGAAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	95836845	95893691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
ES.35851.21	chr9	+	5454	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	26	4776	0	0	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAATTAAACC	NA	False	NA	NA	False	NA	NA	NA	95836845	95935080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.24	chr9	+	10062	42	FSM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	34	-4597	1	-179	multi-exon	FALSE	canonical	3	16	junction_37	10.9955915670048	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATGGACTCCAAGTGT	NA	False	NA	NA	False	TTTAAA	-15	NA	95836846	95939677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.25	chr9	+	10139	42	NIC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	11.9739952217501	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACACTGCTGCTTTGCTT	NA	False	NA	21	True	ATTAAA	-21	NA	95836846	95939852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846109_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.26	chr9	+	10187	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	10.8501775727909	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACACTGCTGCTTTGCTTG	NA	False	NA	22	True	ATTAAA	-22	NA	95836846	95939853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.27	chr9	+	6705	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	29	3522	3	1254	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAGGAACCAGTCTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95836848	95936334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.28	chr9	+	5237	42	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	4	-201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	13.110794059874	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTTATCTCCATC	NA	False	NA	NA	False	AATAAA	-17	NA	95836849	95934879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915622_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.29	chr9	+	10042	42	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	7	-268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	15.5665178600332	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGACTTCTTTGTGCT	NA	False	NA	NA	False	ATTAAA	-9	NA	95836852	95939588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95911212_95911404_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.3	chr9	+	10203	42	NIC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	-10	4	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	12.4960910009247	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGCTTGTCTCTCA	NA	False	NA	29	True	ATTAAA	-29	NA	95836802	95939860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846109_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.30	chr9	+	7884	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	35	2337	9	-2337	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTTGTGTCAAAACTT	NA	False	NA	9	True	ACTAAA	-17	NA	95836854	95937519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.31	chr9	+	9130	43	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	12.7504612872848	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGACACTGCTGCTTTGC	NA	False	NA	19	True	ATTAAA	-19	NA	95836855	95939850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565_95938148_95939243
ES.35851.32	chr9	+	2108	15	NNC	ENSMUSG00000032410.14	novel	3357	21	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	18.3770042638697	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACACTGCTGCTTTGCTT	NA	False	NA	21	True	ATTAAA	-21	NA	95836856	95939852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846109_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863976_95939307
ES.35851.33	chr9	+	5430	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	-19	35	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	10.8501775727909	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCAAACTGAGCATGGTAA	NA	False	NA	NA	False	AATAAA	-1	NA	95836865	95935115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.34	chr9	+	9986	42	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	-5	-183	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	11.4548489014542	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATGGAATGGACTCCAA	NA	False	NA	NA	False	TTTAAA	-43	NA	95836879	95939673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.35	chr9	+	5161	41	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	-4039	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	13.8940409888556	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAATTAAACC	NA	False	NA	NA	False	NA	NA	NA	95849758	95935080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95926638_95926763_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.36	chr9	+	3195	17	NNC	ENSMUSG00000032410.14	novel	6235	40	NA	NA	4038	979	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.3722823518048	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAAG	1660	False	NA	NA	False	NA	NA	NA	95859607	95894897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873154_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
ES.35851.37	chr9	+	8264	26	ISM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	36207	9	17457	-9	3prime_fragment	FALSE	canonical	3	17	junction_24	10.2243630608464	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTACGACACTGCTGCTT	NA	False	NA	16	True	ATTAAA	-16	NA	95873026	95939847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.38	chr9	+	4546	25	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	17719	1258	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_23	11.148539391129	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACCAGTCTTTATAT	NA	False	NA	NA	False	AGTAAA	-22	NA	95873288	95936338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.39	chr9	+	3775	2	NIC	ENSMUSG00000032410.14	novel	3093	24	NA	NA	-12715	1020	intron_retention	FALSE	canonical	3	55	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATTATCCTATATTATAT	NA	False	NA	NA	False	NA	NA	NA	95886800	95894938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95888901_95893263
ES.35851.4	chr9	+	5250	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	-3	-201	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	10.8501775727909	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTTTATCTCCATC	NA	False	NA	NA	False	AATAAA	-17	NA	95836809	95934879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.40	chr9	+	1951	1	NIC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	-6569	979	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	95892946	95894897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95892900_95894900
ES.35851.42	chr9	+	4275	1	NIC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	25662	-5628	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAATTGTTACGA	NA	False	NA	NA	False	NA	NA	NA	95925177	95929452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95925200_95929500
ES.35851.43	chr9	+	4108	4	ISM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	93016	1561	30320	-1561	3prime_fragment	FALSE	canonical	3	17	junction_2	5.43650214343336	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	TTTAAA	-9	NA	95929835	95938295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.44	chr9	+	5294	3	ISM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	93573	262	30877	-262	3prime_fragment	FALSE	canonical	3	17	junction_1	5.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTTTGTGCTCATTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	95930392	95939594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95930497_95933646_95933808_95934565
ES.35851.5	chr9	+	11552	41	NIC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	-3	-2340	intron_retention	FALSE	canonical	3	17	junction_39	10.4558297136095	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCAGTTGTGTCAAAA	NA	False	NA	6	True	ACTAAA	-14	NA	95836809	95937516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.6	chr9	+	10234	42	NNC	ENSMUSG00000032410.14	novel	5499	42	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_40	11.4548489014542	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACACTGCTGCTTTGCTT	NA	False	NA	21	True	ATTAAA	-21	NA	95836810	95939852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921910_95927538_95927715_95929835_95929950_95930393_95930497_95933685_95933808_95934565
ES.35851.7	chr9	+	5481	42	NNC	ENSMUSG00000032410.14	novel	10256	42	NA	NA	-2	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.7729960209541	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACCTTGTATTAAAATA	NA	False	NA	NA	False	NA	NA	NA	95836810	95935093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863872_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900075_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35851.8	chr9	+	1536	12	ISM	ENSMUSG00000032410.14	ENSMUST00000189612.7	3357	21	-72	22411	0	-350	5prime_fragment	FALSE	canonical	3	43	junction_4	6.10243143521397	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGATTTATTGGTTTCA	NA	False	NA	NA	False	AAAAAG	-44	NA	95836812	95860036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849
ES.35851.9	chr9	+	10261	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	-7	2	0	-2	multi-exon	FALSE	canonical	3	17	junction_40	10.3589359987776	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGCTGCTTTGCTTGT	NA	False	NA	23	True	ATTAAA	-23	NA	95836812	95939854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ES.35852.1	chr9	-	1975	1	Intergenic	novelGene_29180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGCTGTAGGGTCATT	5605	False	NA	NA	False	NA	NA	NA	95839645	95837670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95837700_95839600
ES.35853.1	chr9	-	224	1	Intergenic	novelGene_29181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGGCCCTACAGTTTA	NA	False	NA	NA	False	AAAAAG	-19	NA	95896666	95896442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95896400_95896700
ES.35854.1	chr9	-	370	1	Antisense	novelGene_ENSMUSG00000032410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACAAAAAGACTCAGC	NA	False	NA	NA	False	NA	NA	NA	95900725	95900355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_95900400_95900700
ES.35855.1	chr9	-	5038	1	Antisense	novelGene_ENSMUSG00000032410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAGGGTTAAGGAAACC	NA	False	NA	NA	False	NA	NA	NA	95938888	95933850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_95933800_95938900
ES.35856.1	chr9	-	162	1	Intergenic	novelGene_29182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95942801	95942639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_95942600_95942800
ES.35857.1	chr9	+	7322	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	-57	-4450	-57	32	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTGTGTGTTTGTT	NA	False	NA	49	True	AATAGA	-35	NA	96001357	96066693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.10	chr9	+	1443	12	NNC	ENSMUSG00000041440.19	novel	2815	16	NA	NA	-22	-15725	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	20.4494943258218	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGAAGTCTATAGCT	NA	False	NA	NA	False	NA	NA	NA	96001462	96039793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96039454
ES.35857.11	chr9	+	2859	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	66	-110	-4	110	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACCTCTTGACTTAGTCT	NA	False	NA	NA	False	NA	NA	NA	96001480	96062353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.12	chr9	+	4397	17	FSM	ENSMUSG00000041440.19	ENSMUST00000122383.3	4455	17	55	3	-2	-3	multi-exon	FALSE	canonical	1	1	junction_16	18.0831413200251	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTTTCATATGCATA	NA	False	NA	14	True	AATAAA	-24	NA	96001482	96066658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973_96061060_96063824
ES.35857.13	chr9	+	7062	15	NIC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	7	junction_3	17.8269745163941	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATACTTTTCATAT	NA	False	NA	9	True	AATAAA	-19	NA	96001483	96066653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96011053_96011148_96015441_96015518_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.14	chr9	+	9864	15	NIC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	48	junction_1	8.43008460993199	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCATATGCATATTT	NA	False	NA	17	True	AATAAA	-27	NA	96001483	96066661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.15	chr9	+	7018	16	NNC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	-1	-11	intron_retention	FALSE	non_canonical	0	0	junction_15	18.6697616481839	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATAGAAATACTTTTCA	NA	False	NA	6	True	AATAAA	-16	NA	96001483	96066650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059536_96061038
ES.35857.18	chr9	+	7216	17	NNC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	34	-16	intron_retention	FALSE	canonical	0	0	junction_6	23.525833539962	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAGCAATAGAAATACT	NA	False	NA	1	True	AATAAA	-11	NA	96001518	96066645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96023328_96023432_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.19	chr9	+	6880	13	NNC	ENSMUSG00000041440.19	novel	2815	16	NA	NA	15945	-3	intron_retention	FALSE	canonical	2	4	junction_1	19.4522206672886	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTTTTCATATGCATA	NA	False	NA	14	True	AATAAA	-24	NA	96022217	96066658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96022383_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.2	chr9	+	7081	14	NIC	ENSMUSG00000041440.19	novel	2506	16	NA	NA	1	19	intron_retention	FALSE	canonical	0	0	junction_1	19.7490169031031	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAACATTCTTTT	NA	False	NA	36	True	ATTAAA	-40	NA	96001415	96066680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.20	chr9	+	6732	13	NNC	ENSMUSG00000041440.19	novel	2815	16	NA	NA	15967	-49	intron_retention	FALSE	canonical	0	0	junction_1	20.4952569038682	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTATAGGTCTTTAAT	NA	False	NA	-32	True	ATTAAA	-23	NA	96022239	96066612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96022383_96022671_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.21	chr9	+	178	1	Intergenic	novelGene_29185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACAGG	NA	False	NA	NA	False	NA	NA	NA	96029206	96029384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96029200_96029400
ES.35857.22	chr9	+	176	1	Intergenic	novelGene_29186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	96038966	96039142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96039000_96039100
ES.35857.23	chr9	+	278	1	Intergenic	novelGene_29187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCACTAAACTGAAAGC	6827	False	NA	NA	False	NA	NA	NA	96050433	96050711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96050400_96050700
ES.35857.24	chr9	+	9179	1	FSM	ENSMUSG00000041440.19	ENSMUST00000189249.2	2550	1	-1522	-5107	-1522	-1618	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTGAGACAGGGTTTC	7840	False	NA	NA	False	NA	NA	NA	96051446	96060625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96051400_96060600
ES.35857.3	chr9	+	6826	12	NIC	ENSMUSG00000041440.19	novel	2506	16	NA	NA	5	-6	intron_retention	FALSE	canonical	0	0	junction_1	21.1413972500862	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATACTTTTCATATGC	NA	False	NA	11	True	AATAAA	-21	NA	96001419	96066655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.4	chr9	+	7121	15	NIC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	6	-11	intron_retention	FALSE	canonical	0	0	junction_11	18.9156289984807	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATAGAAATACTTTTCA	NA	False	NA	6	True	AATAAA	-16	NA	96001420	96066650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.5	chr9	+	4523	18	NNC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	23.2713792763902	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATACTTTTCATATGC	NA	False	NA	11	True	AATAAA	-21	NA	96001421	96066655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973_96061060_96063310_96063379_96063824
ES.35857.6	chr9	+	1912	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	16	887	3	-887	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTCAAAATTGAGTCT	NA	False	NA	NA	False	TTTAAA	-30	NA	96001430	96061356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.7	chr9	+	7115	15	NNC	ENSMUSG00000041440.19	novel	2506	16	NA	NA	7	-8	intron_retention	FALSE	canonical	0	0	junction_8	24.2706886290977	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATACTTTTCATAT	NA	False	NA	9	True	AATAAA	-19	NA	96001434	96066653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032854_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.8	chr9	+	6936	13	NIC	ENSMUSG00000041440.19	novel	2506	16	NA	NA	14	-6	intron_retention	FALSE	canonical	0	0	junction_1	20.4952569038682	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATACTTTTCATATGC	NA	False	NA	11	True	AATAAA	-21	NA	96001441	96066655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96001666_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ES.35857.9	chr9	+	1931	17	NNC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	-26	-533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.3011910473062	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGTCACATTCCCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	96001458	96064330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973_96061060_96063986
ES.35858.1	chr9	-	173	1	Intergenic	novelGene_29183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTTTAAATTTAAC	NA	False	NA	NA	False	NA	NA	NA	96013310	96013137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96013100_96013300
ES.35859.1	chr9	-	284	1	Intergenic	novelGene_29184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGAGGCTCCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	96018562	96018278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96018300_96018600
ES.3586.1	chr10	+	1608	2	Antisense	novelGene_ENSMUSG00000008398.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTTTTCCAAATAAATGT	NA	False	NA	NA	False	CATAAA	-17	NA	93142524	93144706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93142794_93143367
ES.35860.1	chr9	+	166	1	Intergenic	novelGene_29188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	96069534	96069700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96069500_96069700
ES.35861.1	chr9	+	179	1	Intergenic	novelGene_29189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTAACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	96073064	96073243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96073100_96073200
ES.35862.1	chr9	+	3001	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-22	4	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	130.778145993082	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078305	96201141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.10	chr9	+	3163	19	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-2	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	170.313191894619	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96078325	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96093485_96093605_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96131624_96131759_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.100	chr9	+	7411	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	113.611608707632	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGGTGTCATAATT	NA	False	NA	NA	False	AATAAA	-10	NA	96078365	96205695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.101	chr9	+	2799	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	1	-27	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGGGTAAATTGCATT	NA	False	NA	-23	True	NA	NA	NA	96078370	96201007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.102	chr9	+	2588	12	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.720956553214	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078371	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.103	chr9	+	1761	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	2	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	152.031100835657	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078371	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.104	chr9	+	2816	15	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	145.052013893961	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078371	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.105	chr9	+	2899	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	145.434521348956	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078371	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.106	chr9	+	5673	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	2	-1894	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	153.088413089372	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCCGTTCACCTGCGA	NA	False	NA	NA	False	NA	NA	NA	96078371	96203805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.107	chr9	+	2994	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	149.746214940108	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATACTGCAGTATGGC	NA	False	NA	105	True	NA	NA	NA	96078372	96201135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.108	chr9	+	1572	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	4	14	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	129.689202542842	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTTAATATTTGATG	NA	False	NA	8	True	AATAAA	-14	NA	96078373	96200038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.109	chr9	+	2507	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	9	-20	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	124.802733232178	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTTTGTCTTTATTTC	NA	False	NA	NA	False	AATGAA	-10	NA	96078378	96200911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.11	chr9	+	2785	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078325	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.110	chr9	+	1910	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	9	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	157.827275490927	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078378	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96117274_96117351_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.111	chr9	+	3064	17	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.014432674288	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078380	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96110462_96110639_96111408_96111503_96113783_96113853_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.112	chr9	+	2650	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	141.238839283754	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078390	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155918_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.113	chr9	+	2607	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	2	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	146.358278078591	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGACCAAATTGCTT	NA	False	NA	NA	False	AAGAAA	-5	NA	96078391	96200825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96113783_96113927_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.114	chr9	+	3000	17	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-5	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	162.54305919894	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGCTTGTCTATAGT	NA	False	NA	NA	False	AAGAAA	-14	NA	96078427	96200834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96128834_96129103_96148774_96148938_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.115	chr9	+	2425	10	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	6	23	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	130.011490470346	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGCCAGCAAGATAACT	NA	False	NA	NA	False	NA	NA	NA	96078438	96190324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852
ES.35862.117	chr9	+	2685	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	160.115291795214	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96084193	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.118	chr9	+	2162	10	NIC	ENSMUSG00000032411.16	novel	2212	11	NA	NA	-18	-22	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	131.669713982551	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTACTTTTGTCTTTATT	NA	False	NA	NA	False	AATGAA	-8	NA	96141287	96200909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96141354_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.119	chr9	+	2215	10	FSM	ENSMUSG00000032411.16	ENSMUST00000179065.8	2213	10	2	-4	2	4	multi-exon	FALSE	canonical	0	0	junction_1	137.369826147529	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTCAGTGTTTTTGTT	NA	False	NA	8	True	NA	NA	NA	96141307	96201038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96141354_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.12	chr9	+	1820	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	146.453538889487	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078325	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.120	chr9	+	2412	11	NIC	ENSMUSG00000032411.16	novel	2212	11	NA	NA	-13	11	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	130.214476921731	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCTGTGATTTCTGCT	NA	False	NA	NA	False	NA	NA	NA	96141324	96201148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96141354_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.121	chr9	+	171	1	Intergenic	novelGene_29192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACTATTATTAATGGGA	NA	False	NA	NA	False	NA	NA	NA	96143548	96143719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96143500_96143700
ES.35862.122	chr9	+	2102	6	ISM	ENSMUSG00000032411.16	ENSMUST00000179065.8	2213	10	35810	0	6706	0	intron_retention	FALSE	canonical	3	353	junction_1	34.3301616658005	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96177115	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529
ES.35862.123	chr9	+	165	1	Intergenic	novelGene_29193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	96178601	96178766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96178600_96178800
ES.35862.124	chr9	+	3017	1	FSM	ENSMUSG00000032411.16	ENSMUST00000190689.2	3148	1	133	-2	133	2	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-39	NA	96187286	96190303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96187300_96190300
ES.35862.125	chr9	+	7557	2	NNC	ENSMUSG00000032411.16	novel	550	2	NA	NA	-176	17	intron_retention	FALSE	non_canonical	0	0	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAATATTTGATGCTC	NA	False	NA	11	True	AATAAA	-17	NA	96192442	96200041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96197320_96197361
ES.35862.126	chr9	+	1468	3	ISM	ENSMUSG00000032411.16	ENSMUST00000165768.4	2212	11	51116	44	-165	-17	3prime_fragment	FALSE	canonical	3	407	junction_1	14.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96192453	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_96192742_96199529_96199636_96199840
ES.35862.127	chr9	+	6249	3	ISM	ENSMUSG00000032411.16	ENSMUST00000179065.8	2213	10	51152	-4665	-161	0	3prime_fragment	FALSE	canonical	3	407	junction_1	14.5	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96192457	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_96192742_96199529_96199636_96199840
ES.35862.128	chr9	+	1573	3	ISM	ENSMUSG00000032411.16	ENSMUST00000179065.8	2213	10	51162	1	-151	-1	3prime_fragment	FALSE	canonical	3	407	junction_1	14.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96192467	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_96192742_96199529_96199636_96199840
ES.35862.13	chr9	+	5510	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	-1894	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCCGTTCACCTGCGA	NA	False	NA	NA	False	NA	NA	NA	96078325	96203805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.14	chr9	+	2925	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-1	-17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	143.283762814879	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96078326	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96128834_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.15	chr9	+	1682	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	22	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGATGCTCATATG	NA	False	NA	16	True	AATAAA	-22	NA	96078327	96200046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.16	chr9	+	2716	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.257618827679	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078327	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.17	chr9	+	3011	17	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	165.919961408355	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078327	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.18	chr9	+	1766	13	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	22	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	139.700174978018	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGATGCTCATATG	NA	False	NA	16	True	AATAAA	-22	NA	96078327	96200046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.19	chr9	+	2685	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	146.453538889487	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96078327	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.20	chr9	+	2821	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	-29	4562	0	0	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078327	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.21	chr9	+	1805	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	22	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	158.907326645245	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTGATGCTCATATG	NA	False	NA	16	True	AATAAA	-22	NA	96078327	96200046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.22	chr9	+	7492	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	138.636141001677	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078327	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.23	chr9	+	2752	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	-92	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	151.383486549888	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTCTATAGTTGTCT	NA	False	NA	NA	False	AAGAAA	-19	NA	96078327	96200839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.24	chr9	+	7598	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	149.746214940108	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078332	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.25	chr9	+	2692	14	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	6	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	174.777457823695	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAATGACCATATCAGA	NA	False	NA	-46	True	NA	NA	NA	96078333	96200984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.26	chr9	+	1758	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	6	37	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTCTTTAGTGTGAG	NA	False	NA	31	True	AATAAA	-37	NA	96078333	96200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.27	chr9	+	1641	12	FSM	ENSMUSG00000032411.16	ENSMUST00000188008.7	1576	12	-35	-30	7	23	multi-exon	FALSE	canonical	3	40	junction_2	138.805946951458	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078334	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.28	chr9	+	2790	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	163.034392131696	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078335	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105176_96155918_96155996_96169653_96169776_96172632_96172681_96177017_96177177_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.3	chr9	+	1941	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-11	29	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	147.16506227891	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTCATATGTGTCTTT	NA	False	NA	23	True	AATAAA	-29	NA	96078316	96200053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.30	chr9	+	2671	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	124.629201513219	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCTTTTCCATAT	NA	False	NA	-73	True	NA	NA	NA	96078337	96200957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155918_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.32	chr9	+	7278	12	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	12	-24	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	138.755805477533	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078339	96205675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.33	chr9	+	3184	17	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	12	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	169.746306568803	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078339	96201141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96113783_96113927_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.34	chr9	+	7723	18	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-24	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	166.119563395046	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078347	96205675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.36	chr9	+	3284	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	157.724265341611	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGATTGAGGCCATTAA	NA	False	NA	NA	False	CATAAA	-16	NA	96078347	96201441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96117274_96117351_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.37	chr9	+	3615	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	663	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATGTGTTACACCCAT	NA	False	NA	NA	False	NA	NA	NA	96078347	96201800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.38	chr9	+	2544	11	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.478284973935	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078347	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.39	chr9	+	7315	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078347	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.4	chr9	+	2573	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-10	-17	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	135.467990274045	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96078317	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.40	chr9	+	2851	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	-17	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	152.392242438897	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTCTTTATTTCAAG	NA	False	NA	NA	False	AATGAA	-13	NA	96078347	96200914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96093485_96093605_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.41	chr9	+	1893	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	163.028794251513	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078347	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96117274_96117351_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.42	chr9	+	2699	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	134.927330868822	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078347	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.43	chr9	+	7361	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	-9	2	-9	-2	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGGTGTCATAATTGG	NA	False	NA	NA	False	AATAAA	-12	NA	96078347	96205697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.44	chr9	+	1786	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-42	-31	-9	31	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCATATGTGTCTTTAG	NA	False	NA	25	True	AATAAA	-31	NA	96078347	96200055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.45	chr9	+	2796	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	155.845593100636	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCTTTTCCATAT	NA	False	NA	-73	True	NA	NA	NA	96078347	96200957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96113783_96113853_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.46	chr9	+	2386	10	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	160.739955621909	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078347	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.47	chr9	+	7588	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	147.36144528185	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078347	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.48	chr9	+	2904	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATACTGCAGTATGG	NA	False	NA	104	True	NA	NA	NA	96078347	96201134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.49	chr9	+	1556	12	NNC	ENSMUSG00000032411.16	novel	1576	12	NA	NA	-9	14	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	164.168981678801	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTTAATATTTGATG	NA	False	NA	8	True	AATAAA	-14	NA	96078347	96200038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.5	chr9	+	1845	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	23	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	134.20570627821	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078319	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.50	chr9	+	1558	11	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-9	23	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.478284973935	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078347	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.51	chr9	+	7511	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGGTGTCATAATTG	NA	False	NA	NA	False	AATAAA	-11	NA	96078347	96205696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.53	chr9	+	7419	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	131.410328955577	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGGTGTCATAATTGG	NA	False	NA	NA	False	AATAAA	-12	NA	96078347	96205697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.54	chr9	+	3076	18	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	166.99839420731	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078347	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.55	chr9	+	1558	11	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-8	23	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	131.97105743306	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078348	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.57	chr9	+	1669	13	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	23	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	148.553838912212	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078348	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.58	chr9	+	2798	13	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	136.16378515923	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078348	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.59	chr9	+	1713	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	23	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	161.088485001256	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078348	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.6	chr9	+	2917	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	157.535418758022	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078324	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96111408_96111503_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.60	chr9	+	2819	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078348	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.61	chr9	+	2658	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078348	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.62	chr9	+	7379	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGGTGTCATAATTGG	NA	False	NA	NA	False	AATAAA	-12	NA	96078348	96205697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.63	chr9	+	7279	12	FSM	ENSMUSG00000032411.16	ENSMUST00000188008.7	1576	12	-21	-5682	-8	0	multi-exon	FALSE	canonical	3	40	junction_2	138.805946951458	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078348	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.64	chr9	+	7324	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078348	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.65	chr9	+	1757	13	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-8	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.882683151601	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078348	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084725_96084818_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.66	chr9	+	2217	9	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	147.880652892797	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078348	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.67	chr9	+	2903	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	121.307619140508	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078348	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.68	chr9	+	2802	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCAATATTCAGTGTTT	NA	False	NA	3	True	NA	NA	NA	96078348	96201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.69	chr9	+	1584	12	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-7	23	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	133.675380822411	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078349	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.7	chr9	+	2315	17	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-3	23	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	162.41102131244	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078324	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96128834_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.70	chr9	+	2681	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-7	-18	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGTCTTTATTTCAA	NA	False	NA	NA	False	AATGAA	-12	NA	96078349	96200913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.71	chr9	+	2839	16	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	149.746214940108	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCTTTTCCATAT	NA	False	NA	-73	True	NA	NA	NA	96078349	96200957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.72	chr9	+	7464	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	121.307619140508	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078349	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.73	chr9	+	1846	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-7	9	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCATGTTTTAATATT	NA	False	NA	3	True	AATAAA	-9	NA	96078349	96200033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.74	chr9	+	2715	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078349	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.75	chr9	+	2842	13	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-7	7	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	139.700174978018	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTATGGCTGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	96078349	96201144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.76	chr9	+	2650	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	96078349	96201036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.77	chr9	+	2863	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-39	-1111	-6	-2	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATACTGCAGTATGGC	NA	False	NA	105	True	NA	NA	NA	96078350	96201135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.78	chr9	+	2750	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCAGTATGGCTG	NA	False	NA	107	True	NA	NA	NA	96078350	96201137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.79	chr9	+	2497	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-6	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	128.501149623439	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTTTTGTCTTTATTTC	NA	False	NA	NA	False	AATGAA	-10	NA	96078350	96200911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155918_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.8	chr9	+	2882	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	142.640401091937	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATACTGCAGTATGG	NA	False	NA	104	True	NA	NA	NA	96078324	96201134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.80	chr9	+	1813	15	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-5	23	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078351	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.83	chr9	+	2772	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	172.919894577889	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAACTCAATATTCAGT	NA	False	NA	-1	True	NA	NA	NA	96078351	96201029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96084374_96084449_96093185_96093270_96105146_96105252_96155918_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.85	chr9	+	2788	16	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-5	-22	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	160.184393746707	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTACTTTTGTCTTTATT	NA	False	NA	NA	False	AATGAA	-8	NA	96078351	96200909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96129102_96129142_96148860_96148938_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.87	chr9	+	7399	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_4	124.629201513219	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078351	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155918_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.88	chr9	+	1761	14	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126.011317233834	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATGCTCATATGT	NA	False	NA	17	True	AATAAA	-23	NA	96078354	96200047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084232_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.89	chr9	+	2659	12	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	158.068663812088	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078354	96201141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.9	chr9	+	2807	13	NNC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	136.108310628786	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTATGGCTGTGAT	NA	False	NA	NA	False	NA	NA	NA	96078324	96201141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.90	chr9	+	1719	13	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	37	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	132.410635482535	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTCTTTAGTGTGAG	NA	False	NA	31	True	AATAAA	-37	NA	96078356	96200061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.91	chr9	+	7532	15	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	149.492338210604	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078356	96205699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96131042_96131163_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.92	chr9	+	2577	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	125.257618827679	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAACTCAATATTCAGT	NA	False	NA	-1	True	NA	NA	NA	96078358	96201029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.93	chr9	+	2689	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	2	4663	2	2	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTCAGTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	96078358	96201036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.94	chr9	+	7137	11	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	3	-24	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	152.023550807104	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	96078359	96205675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.95	chr9	+	2539	10	ISM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	3	15375	3	23	5prime_fragment	FALSE	canonical	3	58	junction_3	112.773125246123	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGCCAGCAAGATAACT	NA	False	NA	NA	False	NA	NA	NA	96078359	96190324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852
ES.35862.96	chr9	+	2745	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	139.65299561296	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCTTTTCCATAT	NA	False	NA	-73	True	NA	NA	NA	96078359	96200957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96105146_96105252_96113783_96113853_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35862.99	chr9	+	2966	17	NNC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	163.381826081575	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078363	96201034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96111408_96111503_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ES.35863.1	chr9	-	173	1	Intergenic	novelGene_29190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGTGAGCAAGGA	NA	False	NA	NA	False	NA	NA	NA	96081187	96081014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96081000_96081200
ES.35864.1	chr9	-	166	1	Intergenic	novelGene_29191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGTTCGAGTGTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	96086945	96086779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96086800_96086900
ES.35865.1	chr9	+	203	1	Intergenic	novelGene_29194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCCCACTCTGCATCA	NA	False	NA	NA	False	NA	NA	NA	96219977	96220180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96220000_96220200
ES.35866.1	chr9	+	1492	1	Antisense	novelGene_ENSMUSG00000032412.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTCATTAACCACGC	NA	False	NA	NA	False	AATAAA	-21	NA	96245947	96247439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_96245900_96247400
ES.35866.2	chr9	+	1214	2	Antisense	novelGene_ENSMUSG00000032412.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGCAATAATTTCATTA	NA	False	NA	NA	False	AATAAA	-14	NA	96245947	96247432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_96246215_96246485
ES.35867.1	chr9	+	160	1	Intergenic	novelGene_29198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAAGCCCCAAAGT	7372	False	NA	NA	False	NA	NA	NA	96266645	96266805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96266600_96266800
ES.35868.1	chr9	+	171	1	Intergenic	novelGene_29199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGAACTGAGCAGTG	4500	False	NA	NA	False	NA	NA	NA	96273000	96273171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96273000_96273200
ES.35869.1	chr9	+	148	1	Intergenic	novelGene_29200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAAGGCCCTTTT	9262	False	NA	NA	False	AATAAA	-12	NA	96277762	96277910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96277800_96277900
ES.3587.1	chr10	-	1752	11	Antisense	novelGene_ENSMUSG00000089214.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTATTGAAACGATCC	NA	False	NA	NA	False	NA	NA	NA	93068569	92996615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_92997056_93044027_93044179_93047770_93047934_93052200_93052294_93053825_93053952_93057448_93057504_93060795_93060909_93061882_93061980_93062574_93062636_93064504_93064630_93068241
ES.3587.10	chr10	-	1168	4	NNC	ENSMUSG00000008398.17	novel	1653	6	NA	NA	-26	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	21.1712593442672	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACATGTTCCAAAGTG	NA	False	NA	NA	False	AATAAA	-9	NA	93147023	93085192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93085398_93101198_93101543_93120630_93120840_93146613
ES.3587.11	chr10	-	6565	4	NNC	ENSMUSG00000008398.17	novel	4212	5	NA	NA	1042	-8	intron_retention	FALSE	canonical	0	0	junction_3	21.2759645296439	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACATGTTCCAAAGTG	NA	False	NA	NA	False	AATAAA	-9	NA	93145631	93085192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93090674_93100741_93101543_93120630_93120840_93145557
ES.3587.12	chr10	-	1931	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-62	2343	-62	-434	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTAATGTTTGTGGTTT	NA	False	NA	NA	False	TATAAA	-21	NA	93147059	93085618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ES.3587.13	chr10	-	631	4	ISM	ENSMUSG00000008398.17	ENSMUST00000129827.8	1653	6	45446	438	45446	-438	3prime_fragment	FALSE	canonical	2	3	junction_3	20.7417989148054	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTTTAATGTTTGTG	NA	False	NA	NA	False	TATAAA	-17	NA	93101227	93085622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93085971_93090550_93090674_93100741_93100873_93101198
ES.3587.14	chr10	-	1559	5	NNC	ENSMUSG00000008398.17	novel	4212	5	NA	NA	694	-439	intron_retention	FALSE	canonical	0	0	junction_4	19.8415599185145	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAATTTTAATGTTTGT	NA	False	NA	NA	False	TATAAA	-16	NA	93145979	93085623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93145900
ES.3587.15	chr10	-	1832	1	Intergenic	novelGene_2741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAGATGTTCCAGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	93135374	93133542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93133500_93135400
ES.3587.16	chr10	-	5314	1	Intergenic	novelGene_2742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	93143641	93138327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93138300_93143600
ES.3587.2	chr10	-	1803	11	Antisense	novelGene_ENSMUSG00000089214.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTATTGAAACGATCC	NA	False	NA	NA	False	NA	NA	NA	93068569	92996615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_92997060_93044027_93044179_93047770_93047934_93052200_93052337_93053823_93053952_93057448_93057510_93060802_93060911_93061883_93061978_93062571_93062636_93064504_93064630_93068240
ES.3587.4	chr10	-	4872	5	Antisense	novelGene_ENSMUSG00000089214.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93057747	92996656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_92997060_93044027_93047934_93052200_93052337_93053823_93053952_93057448
ES.3587.5	chr10	-	2632	5	NNC	ENSMUSG00000008398.17	novel	931	2	NA	NA	17	50492	intron_retention	FALSE	canonical	0	0	junction_1	20.3592730715023	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACTTGGTATTTTTC	NA	False	NA	NA	False	TATAAA	-10	NA	93146980	93032783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93033916_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ES.3587.6	chr10	-	5184	1	Antisense	novelGene_ENSMUSG00000020015.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGTTTTCTGCAGAAT	NA	False	NA	NA	False	NA	NA	NA	93057747	93052563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_93052600_93057700
ES.3587.7	chr10	-	4216	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-6	2	-6	-2	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTTTGTTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-31	NA	93147003	93083277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ES.3587.8	chr10	-	3841	6	FSM	ENSMUSG00000008398.17	ENSMUST00000129827.8	1653	6	-296	-1892	28	-17	multi-exon	FALSE	canonical	2	3	junction_3	17.64086165696	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTGGATTCGAGGGT	NA	False	NA	NA	False	AATAAA	-16	NA	93146969	93083292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93085971_93090550_93090674_93100741_93100873_93101198_93101543_93120630_93120840_93146613
ES.3587.9	chr10	-	2334	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	-37	1915	-37	-6	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGTTCCAAAGTGCA	NA	False	NA	NA	False	AATAAA	-11	NA	93147034	93085190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ES.35870.1	chr9	-	2093	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	129	-228	129	228	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTTTGGTTTGGTTT	NA	False	NA	NA	False	AATGAA	-16	NA	96246366	96214479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.11	chr9	-	5153	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	8	-29	intron_retention	FALSE	canonical	3	777	junction_1	37.7497019855786	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACAAAAACTTCAAACT	NA	False	NA	-39	True	AATAAA	-12	NA	96246487	96214736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96215748_96217431_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.12	chr9	-	1933	6	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	6	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	363.941423858291	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACAAAAACTTCAAACT	NA	False	NA	-39	True	AATAAA	-12	NA	96246489	96214736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222172_96222440_96227817_96227947_96246098
ES.35870.13	chr9	-	1640	7	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	115	-31	combination_of_known_junctions	TRUE	canonical	1	12	junction_6	297.823773396282	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAATACAAAAACTTCAAA	NA	False	NA	-41	True	AATAAA	-10	NA	96231314	96214738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96231240
ES.35870.14	chr9	-	1813	7	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	136	-38	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	392.303312360333	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATTGTGAAATACAAAAA	NA	False	NA	44	True	AATAAA	-3	NA	96246359	96214745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217438_96217512_96220707_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.15	chr9	-	1655	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	-43	382	-43	-382	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCGCATGTGTGAGTG	NA	False	NA	1	True	AATAAA	-23	NA	96246538	96215089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.16	chr9	-	4784	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	18	-388	intron_retention	FALSE	canonical	3	777	junction_1	37.7497019855786	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTTCTGCGCATGTG	NA	False	NA	-5	True	AATAAA	-17	NA	96246477	96215095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96215748_96217431_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.17	chr9	-	3876	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	116	-391	intron_retention	FALSE	canonical	3	621	junction_2	88.2510056599923	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTCTGCTTCTGCGCAT	NA	False	NA	-8	True	AATAAA	-14	NA	96246379	96215098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96227947_96246098
ES.35870.18	chr9	-	1506	7	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	3	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	302.903037290814	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGACTCTGCTTCTGC	NA	False	NA	-12	True	AATAAA	-10	NA	96246492	96215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222344_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.19	chr9	-	1505	8	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	-32457	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	360.744468327058	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGACTCTGCTTCTGC	NA	False	NA	-12	True	AATAAA	-10	NA	96278952	96215102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96261576_96261721_96278793
ES.35870.2	chr9	-	3682	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	5	9	intron_retention	FALSE	canonical	3	621	junction_1	89.2443835767831	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGGAGTCTTCTTTCA	NA	False	NA	-1	True	AATACA	-32	NA	96246490	96214698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.20	chr9	-	1388	4	NNC	ENSMUSG00000032412.9	novel	278	2	NA	NA	129	-2927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	383.489533393315	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTTATGAACATATT	NA	False	NA	NA	False	ATTAAA	-8	NA	96246366	96223647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96224531_96225320_96225429_96227817_96227947_96246098
ES.35870.21	chr9	-	3340	1	Intergenic	novelGene_29195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAATCTGATGATCTGT	NA	False	NA	NA	False	NA	NA	NA	96240484	96237144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96237100_96240500
ES.35870.22	chr9	-	2403	1	Intergenic	novelGene_29196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96239674	96237271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96237300_96239700
ES.35870.23	chr9	-	204	1	Intergenic	novelGene_29197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGCCTTTGCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	96249880	96249676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96249700_96249900
ES.35870.3	chr9	-	1996	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	3	-5	3	5	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATGATGGAGTCTTCT	NA	False	NA	-5	True	AATACA	-28	NA	96246492	96214702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.4	chr9	-	3903	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	21517	-4	656	4	3prime_fragment	FALSE	canonical	3	621	junction_2	80.3713602942961	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATGATGGAGTCTTC	NA	False	NA	-6	True	AATAAA	-45	NA	96224978	96214703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254
ES.35870.5	chr9	-	3359	7	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	597	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	302.130766390978	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96245898	96214707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96244136
ES.35870.6	chr9	-	6765	5	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	109	0	intron_retention	FALSE	canonical	3	803	junction_1	34.9213401804684	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96246386	96214707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ES.35870.7	chr9	-	1922	7	NNC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	59	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	388.314305685485	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTCAAACTGATTTA	NA	False	NA	-33	True	AATAAA	-18	NA	96246436	96214730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96215748_96217431_96217516_96220707_96220763_96222254_96222440_96225320_96225429_96227811_96227947_96246098
ES.35870.8	chr9	-	1855	6	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	6	-25	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	304.870070685858	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAACTTCAAACTGATT	NA	False	NA	-35	True	AATAAA	-16	NA	96246489	96214732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96227817_96227947_96246098
ES.35871.1	chr9	+	175	1	Intergenic	novelGene_29201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGAGAGCAGGGCT	5859	False	NA	NA	False	NA	NA	NA	96284730	96284905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96284700_96284900
ES.35871.2	chr9	+	285	1	Intergenic	novelGene_29202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCGAAGAA	5860	False	NA	NA	False	NA	NA	NA	96284731	96285016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96284700_96285000
ES.35872.1	chr9	-	1262	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	-40	10	-40	-10	multi-exon	FALSE	canonical	3	1085	junction_1	10	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAATATGCTCTTT	3673	False	NA	-10	True	ATTAAA	-25	NA	96360768	96352999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96353906_96356010_96356059_96360460
ES.35872.2	chr9	-	3169	3	NNC	ENSMUSG00000051234.7	novel	1232	3	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	552.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATTAATATGCTCTT	3797	False	NA	-11	True	ATTAAA	-24	NA	96360644	96353000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96355008_96355080_96356059_96360460
ES.35872.3	chr9	-	1087	2	NIC	ENSMUSG00000051234.7	novel	1232	3	NA	NA	-2	-12	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATTAATATGCTCT	3798	False	NA	-12	True	ATTAAA	-23	NA	96360643	96353001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96353906_96360460
ES.35872.4	chr9	-	802	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	59	371	-6	-371	multi-exon	FALSE	canonical	3	1085	junction_1	10	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGTCTTCATTTGC	3772	False	NA	45	True	NA	NA	NA	96360669	96353360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96353906_96356010_96356059_96360460
ES.35872.6	chr9	-	409	2	FSM	ENSMUSG00000051234.7	ENSMUST00000128955.2	325	2	-86	2	1	-2	multi-exon	FALSE	canonical	3	1105	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCGCTGTGGTAACCCA	3714	False	NA	NA	False	ATTAAA	-13	NA	96360727	96355916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96356059_96360460
ES.35873.1	chr9	+	168	1	Intergenic	novelGene_29203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGCAATTAAG	8143	False	NA	NA	False	NA	NA	NA	96372074	96372242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96372100_96372200
ES.35874.1	chr9	-	174	1	Intergenic	novelGene_29204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGCAAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	96373644	96373470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96373500_96373600
ES.35875.1	chr9	-	175	1	Intergenic	novelGene_29205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	96380159	96379984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96380000_96380200
ES.35876.1	chr9	-	3155	3	Intergenic	novelGene_29206	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	6784	False	NA	NA	False	NA	NA	NA	96388201	96382412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96383950_96384155_96384701_96387128
ES.35877.1	chr9	+	228	1	Intergenic	novelGene_29207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTTTTTTTTTTTTA	527	False	NA	NA	False	NA	NA	NA	96392842	96393070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96392800_96393100
ES.35878.1	chr9	+	177	1	Intergenic	novelGene_29208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	96507338	96507515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96507300_96507500
ES.35879.1	chr9	-	5842	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	-29	0	-29	0	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513699	96421352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.10	chr9	-	5602	24	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	225	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	18.0528524627436	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTCTTTGTGAGACC	NA	False	NA	NA	False	AATAAA	-13	NA	96513364	96421354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513319
ES.35879.13	chr9	-	3909	24	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	33	1228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.6647558927237	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATTATTTTTACTTCAT	NA	False	NA	NA	False	AATATA	-23	NA	96513556	96423129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442826_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452864_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.14	chr9	-	3900	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	6	1907	6	1098	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGTCTATTTCCATA	NA	False	NA	NA	False	ATTAAA	-26	NA	96513664	96423259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.16	chr9	-	3070	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	82	2661	1	344	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTCCTCTGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	96513588	96424013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.17	chr9	-	2729	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	102	2982	21	23	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGATGTGTGTATTA	NA	False	NA	NA	False	NA	NA	NA	96513568	96424334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.18	chr9	-	4972	17	NNC	ENSMUSG00000032413.13	novel	1987	20	NA	NA	304	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	21.3181810610099	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAAGTCTTTTTTGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	96513285	96439347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96442548_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513054
ES.35879.19	chr9	-	4963	17	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.8164447691374	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAAGTCTTTTTTGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	96513638	96439347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96442548_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.2	chr9	-	5763	24	NIC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_23	17.772666509509	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513654	96421352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513450
ES.35879.20	chr9	-	6733	15	NIC	ENSMUSG00000032413.13	novel	1987	20	NA	NA	19292	2	intron_retention	FALSE	canonical	3	24	junction_1	16.2727078388375	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAAGTCTTTTTTGGGT	NA	False	NA	NA	False	AATAAA	-20	NA	96494297	96439347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434
ES.35879.21	chr9	-	4130	16	ISM	ENSMUSG00000032413.13	ENSMUST00000128346.8	1987	20	33	11933	33	-918	5prime_fragment	FALSE	canonical	2	3	junction_15	18.52445830667	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAGAAGGATATACTTGT	NA	False	NA	NA	False	NA	NA	NA	96513556	96440267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513450
ES.35879.22	chr9	-	849	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	-8	-7971	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTATTTAGTCTTTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	96513597	96461911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.3	chr9	-	5596	22	NIC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	19.4944029411456	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513684	96421352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.4	chr9	-	5647	23	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.5588743780925	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513562	96421352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96435116_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.5	chr9	-	5700	25	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.5425561584397	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513644	96421352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96423141_96423227_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.7	chr9	-	5744	25	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	22	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.5425561584397	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTCTTTGTGAGACCT	NA	False	NA	NA	False	AATAAA	-14	NA	96513648	96421353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96422129_96422174_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ES.35879.8	chr9	-	5612	24	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	467	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	17.772666509509	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTCTTTGTGAGACCT	NA	False	NA	NA	False	AATAAA	-14	NA	96513122	96421353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513068
ES.35879.9	chr9	-	5821	24	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.5399837278125	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTTCTTTGTGAGACCT	NA	False	NA	NA	False	AATAAA	-14	NA	96513585	96421353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435037_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513450
ES.3588.1	chr10	+	264	1	Intergenic	novelGene_2743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAAAAGAGCTTAGA	NA	False	NA	NA	False	NA	NA	NA	93220589	93220853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93220600_93220900
ES.3588.2	chr10	+	157	1	Intergenic	novelGene_2744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACAAATTTT	NA	False	NA	NA	False	NA	NA	NA	93220591	93220748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93220600_93220700
ES.35880.1	chr9	-	156	1	Intergenic	novelGene_29209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	96559953	96559797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96559800_96560000
ES.35881.1	chr9	+	5657	1	Genic_Genomic	ENSMUSG00000102097.2	novel	NA	NA	NA	NA	1686	1721	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAAACTCCTCGCA	NA	False	NA	NA	False	NA	NA	NA	96589566	96595223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_96589600_96595200
ES.35882.1	chr9	-	6641	3	NIC	ENSMUSG00000040433.17	novel	7406	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAAGTGTCTTTTCTAA	2526	False	NA	-17	True	ATTAAA	-14	NA	96634736	96564822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96571083_96633354_96633437_96634437
ES.35882.2	chr9	-	4115	3	FSM	ENSMUSG00000040433.17	ENSMUST00000140121.8	2673	3	543	-1985	93	10	multi-exon	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATTGTTTGTGATTTT	9607	False	NA	NA	False	NA	NA	NA	96601810	96567465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96571083_96600262_96600363_96601412
ES.35882.3	chr9	-	175	1	Intergenic	novelGene_29210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCCCTCCTGCA	NA	False	NA	NA	False	NA	NA	NA	96586602	96586427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96586400_96586600
ES.35882.4	chr9	-	1372	5	NIC	ENSMUSG00000040433.17	novel	2341	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTTCTGTGGCTCAGTT	2471	False	NA	NA	False	ACTAAA	-14	NA	96634791	96611903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96612323_96613344_96613796_96614300_96614367_96633354_96633437_96634437
ES.35882.5	chr9	-	5490	4	NNC	ENSMUSG00000040433.17	novel	566	4	NA	NA	0	5539	intron_retention	TRUE	non_canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAATAAAAAATTTG	2482	False	NA	NA	False	NA	NA	NA	96634780	96623794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96625168_96626965_96630658_96633354_96633437_96634437
ES.35882.6	chr9	-	5173	1	NIC	ENSMUSG00000040433.17	novel	7406	6	NA	NA	-17	-59	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTGTGATCTTTAGC	2499	False	NA	NA	False	AAAACA	-25	NA	96634763	96629590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96629600_96634800
ES.35883.1	chr9	-	3916	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	-88	-920	-43	912	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	96771570	96704476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ES.35883.2	chr9	-	2981	7	NNC	ENSMUSG00000043587.16	novel	3118	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.9155027478869	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTACGGTGTGTATCTG	NA	False	NA	6	True	AATAAA	-24	NA	96771483	96705388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96751789_96751854_96771411
ES.35883.3	chr9	-	3145	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	-230	-7	-185	-1	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTACGGTGTGTATCT	NA	False	NA	5	True	AATAAA	-23	NA	96771712	96705389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ES.35883.5	chr9	-	2543	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	39	326	23	-84	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTAGAACTGGGTC	NA	False	NA	NA	False	AATAAA	-20	NA	96771443	96705722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ES.35884.1	chr9	+	758	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-44	-224	-44	224	mono-exon	FALSE	NA	NA	NA	NA	NA	1552	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCACCTGACACAAACAC	NA	False	NA	NA	False	NA	NA	NA	96777666	96778424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_96777700_96778400
ES.35884.2	chr9	+	600	2	Genic_Genomic	ENSMUSG00000062933.8	novel	490	1	NA	NA	-42	188	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACTAAATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	96777668	96778388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_96777780_96777899
ES.35885.1	chr9	-	2675	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	46	-1	-33	1	multi-exon	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTAAAGTGCTCTAT	NA	False	NA	NA	False	AATAAA	-23	NA	96900850	96825533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96826758_96877627_96878475_96900246
ES.35886.1	chr9	-	181	1	Intergenic	novelGene_29211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	96904444	96904263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96904300_96904400
ES.35887.1	chr9	-	173	1	Intergenic	novelGene_29212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAATGTTGTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	96914861	96914688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96914700_96914900
ES.35888.1	chr9	-	208	1	Intergenic	novelGene_29213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCAGGCAGCCTCTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	96924273	96924065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96924100_96924300
ES.35889.1	chr9	+	230	1	Intergenic	novelGene_29215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96951825	96952055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96951800_96952100
ES.3589.1	chr10	+	177	1	Intergenic	novelGene_2745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7261	False	NA	NA	False	NA	NA	NA	93268759	93268936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93268800_93268900
ES.35890.1	chr9	+	224	1	Intergenic	novelGene_29217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCGGTGGTGGTGGCA	NA	False	NA	NA	False	AATACA	-30	NA	96955232	96955456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96955200_96955500
ES.35891.1	chr9	+	214	1	Intergenic	novelGene_29218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCATAATAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	96955799	96956013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96955800_96956000
ES.35892.1	chr9	+	172	1	Intergenic	novelGene_29219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	96956226	96956398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96956200_96956400
ES.35893.1	chr9	+	577	1	Antisense	novelGene_ENSMUSG00000032449.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAGAT	NA	False	NA	NA	False	AGTAAA	-23	NA	96958373	96958950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_96958400_96959000
ES.35893.2	chr9	+	9007	3	NNC	ENSMUSG00000084911.2	novel	3207	2	NA	NA	-9005	2243	intron_retention	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACTTTAAACAGCACT	NA	False	NA	NA	False	NA	NA	NA	96958373	96972906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_96961295_96962246_96962535_96967108
ES.35893.3	chr9	+	4640	4	Intergenic	novelGene_29220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACTTTAAACAGCACT	NA	False	NA	NA	False	NA	NA	NA	96958373	96972906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96961295_96962246_96962535_96967108_96967175_96971541
ES.35893.4	chr9	+	4212	5	Intergenic	novelGene_29221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-32	NA	96958483	96972880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96961295_96962247_96962535_96967108_96967176_96971541_96971579_96971870
ES.35894.1	chr9	+	2677	4	Antisense	novelGene_ENSMUSG00000032449.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTAGCGGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	96973273	96993440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_96975231_96979155_96979233_96982126_96982293_96992963
ES.35894.2	chr9	+	143	1	Intergenic	novelGene_29224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96987410	96987553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96987400_96987600
ES.35894.3	chr9	+	230	1	Intergenic	novelGene_29225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTTAAATTGGGATC	NA	False	NA	NA	False	ATTAAA	-15	NA	96993357	96993587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_96993400_96993600
ES.35895.1	chr9	-	3762	2	Intergenic	novelGene_29214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAATACCTGTCTGCAC	NA	False	NA	NA	False	AATAAA	-27	NA	96954701	96950228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96951835_96952545
ES.35895.10	chr9	-	5632	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	50	352	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAAGAGGTAGGTGGG	NA	False	NA	-6	True	NA	NA	NA	96993160	96956661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.100	chr9	-	4499	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-12	-239	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCTAACCTTTCTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	96993222	96957856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.101	chr9	-	4353	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	30	844	30	-240	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGCTAACCTTTCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	96993180	96957857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.102	chr9	-	3464	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	6	-1132	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTAGGGTGGATCTT	NA	False	NA	NA	False	TTTAAA	-39	NA	96993080	96958749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.103	chr9	-	3406	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-1225	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTGTAATGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	96993181	96958842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.104	chr9	-	3331	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	33	1863	33	-1259	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTTGTCTATGAAGT	NA	False	NA	NA	False	NA	NA	NA	96993177	96958876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.105	chr9	-	3800	3	NNC	ENSMUSG00000032449.14	novel	532	3	NA	NA	-1033	-1444	at_least_one_novel_splicesite	FALSE	canonical	3	509	junction_1	395.5	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAAAGTTAGCGTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	96968347	96959061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109
ES.35895.106	chr9	-	2979	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	1638	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGGTCTCAGGCTATA	NA	False	NA	NA	False	AATAAA	-31	NA	96993177	96959331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.107	chr9	-	2777	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	124	2326	0	1630	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTAGAGAAGGTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	96993086	96959339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.108	chr9	-	2860	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	1519	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAGACCAAAGGCACG	NA	False	NA	NA	False	ATTAAA	-14	NA	96993177	96959450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.11	chr9	-	6171	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-1046	-4593	-1046	351	multi-exon	FALSE	canonical	3	1282	junction_1	9	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGAAGAGGTAGGTGG	NA	False	NA	-7	True	NA	NA	NA	96968360	96956662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109
ES.35895.110	chr9	-	6166	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-4174	-1460	592	1174	multi-exon	FALSE	canonical	3	1282	junction_1	9	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCTCTTCAGAATGACT	NA	False	NA	0	True	NA	NA	NA	96971488	96959795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109
ES.35895.111	chr9	-	5989	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	28	1160	intron_retention	FALSE	canonical	3	669	junction_4	274.76014792704	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGCAATGGCTTTC	NA	False	NA	-14	True	ATTAAA	-37	NA	96993182	96959809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.112	chr9	-	2457	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	1159	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTGCAATGGCTTT	NA	False	NA	-15	True	ATTAAA	-36	NA	96993180	96959810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.113	chr9	-	2500	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	24	1159	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	430.738156395507	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTGCAATGGCTTT	NA	False	NA	-15	True	ATTAAA	-36	NA	96993186	96959810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.114	chr9	-	2401	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	29	2797	29	1159	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTGCAATGGCTTT	NA	False	NA	-15	True	ATTAAA	-36	NA	96993181	96959810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.115	chr9	-	2542	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-10	1158	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGTGCAATGGCTT	NA	False	NA	-16	True	ATTAAA	-35	NA	96993220	96959811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.116	chr9	-	5218	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-3329	-1357	1437	1071	multi-exon	FALSE	canonical	3	1282	junction_1	9	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTTCCTATGGATGTT	NA	False	NA	-103	True	TATAAA	-20	NA	96970643	96959898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109
ES.35895.117	chr9	-	2320	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	51	1063	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	1061	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACTATAGATTTTCCTA	NA	False	NA	-111	True	TATAAA	-12	NA	96993159	96959906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.118	chr9	-	1573	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	30	3624	30	332	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCTGCCTGTTACAGTG	NA	False	NA	NA	False	NA	NA	NA	96993180	96960637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.119	chr9	-	5442	6	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	33	279	intron_retention	FALSE	canonical	3	263	junction_3	390.203741652999	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTCTGCAATACTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	96993177	96960690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96979234_96982127_96982293_96992963
ES.35895.12	chr9	-	5338	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	7	0	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_5	458.242778933225	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993079	96957013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.120	chr9	-	3266	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-2172	-562	-2172	276	multi-exon	FALSE	canonical	3	1282	junction_1	9	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTCTGCAATACTGTA	NA	False	NA	NA	False	NA	NA	NA	96969486	96960693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109
ES.35895.121	chr9	-	1588	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	8	222	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGTACTGTAATTTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	96993202	96960747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.122	chr9	-	5045	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	-1	187	intron_retention	FALSE	canonical	3	669	junction_4	274.76014792704	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGTTGTTTAAACAA	NA	False	NA	NA	False	AATACA	-18	NA	96993211	96960782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.123	chr9	-	178	1	Intergenic	novelGene_29222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	910	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGATGCAGTATCA	3419	False	NA	NA	False	NA	NA	NA	96963181	96963003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96963000_96963200
ES.35895.124	chr9	-	2410	4	FSM	ENSMUSG00000032449.14	ENSMUST00000148337.2	685	4	-142	-1583	28	-1528	multi-exon	FALSE	canonical	3	669	junction_1	32.124756808418	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATGGTCCCGTACAGAT	NA	False	NA	NA	False	NA	NA	NA	96993182	96973282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.125	chr9	-	702	4	FSM	ENSMUSG00000032449.14	ENSMUST00000148337.2	685	4	-137	120	33	-120	multi-exon	FALSE	canonical	3	669	junction_1	32.124756808418	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATCTGTTATCAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	96993177	96974985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.126	chr9	-	155	1	Intergenic	novelGene_29223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	96986847	96986692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96986700_96986800
ES.35895.127	chr9	-	1079	1	Genic_Genomic	ENSMUSG00000032449.14	novel	NA	NA	NA	NA	-16	-10792	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGGTGGTTTGATT	NA	False	NA	NA	False	AATAAA	-10	NA	96993226	96992147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_96992100_96993200
ES.35895.13	chr9	-	5147	8	FSM	ENSMUSG00000032449.14	ENSMUST00000153070.8	1203	8	12	-3956	-8	0	multi-exon	FALSE	canonical	3	41	junction_3	473.47189214679	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993048	96957013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.14	chr9	-	5224	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	3	0	3	0	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993207	96957013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.15	chr9	-	5331	8	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993211	96957013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.16	chr9	-	5233	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCTCTTGTTTCCAC	NA	False	NA	-2	True	NA	NA	NA	96993181	96957015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.17	chr9	-	5340	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	301.8849625474	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCTCTTGTTTCCAC	NA	False	NA	-2	True	NA	NA	NA	96993181	96957015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.18	chr9	-	5252	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGCTCTTGTTTCCA	NA	False	NA	-3	True	NA	NA	NA	96993181	96957016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.2	chr9	-	8307	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	24	6779	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	444.374818809343	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTCTCAATACCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	96993186	96950234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96951828_96955502_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.20	chr9	-	5845	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	479.619785756268	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGCTCTTGTTTCC	NA	False	NA	-4	True	NA	NA	NA	96993223	96957017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96978546_96979234_96982127_96982293_96992963
ES.35895.21	chr9	-	8788	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	21	-4	intron_retention	FALSE	canonical	3	669	junction_4	274.76014792704	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGCTCTTGTTTCC	NA	False	NA	-4	True	NA	NA	NA	96993189	96957017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.22	chr9	-	4986	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	288	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGTGACATTTTCACACT	NA	False	NA	NA	False	ATTAAA	-18	NA	96993182	96957329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.23	chr9	-	4877	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	33	317	33	287	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTGACATTTTCACAC	NA	False	NA	NA	False	ATTAAA	-17	NA	96993177	96957330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.24	chr9	-	6398	4	NIC	ENSMUSG00000032449.14	novel	894	3	NA	NA	-1428	284	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	274.927061034175	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTAGTGACATTTTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	96973625	96957333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543
ES.35895.25	chr9	-	4815	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	24	159	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGGTGTGTGGTCTTA	NA	False	NA	NA	False	TATAAA	-35	NA	96993186	96957458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.26	chr9	-	4878	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	35	155	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	495.948018949567	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGTTGGTGTGTGGT	NA	False	NA	NA	False	TATAAA	-31	NA	96993175	96957462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96981134_96981233_96982127_96982293_96992963
ES.35895.27	chr9	-	4747	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	30	450	30	154	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATCTGTTGGTGTGTGG	NA	False	NA	NA	False	TATAAA	-30	NA	96993180	96957463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.28	chr9	-	4854	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	21	149	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTTGAATCTGTTGGTG	NA	False	NA	NA	False	TATAAA	-25	NA	96993189	96957468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.29	chr9	-	5002	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	504.737555567247	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTCATACCTTGAAT	NA	False	NA	NA	False	TATAAA	-16	NA	96993180	96957477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96972145_96972228_96975129_96975231_96979155_96979234_96981134_96981219_96982127_96982293_96992963
ES.35895.3	chr9	-	4425	4	NNC	ENSMUSG00000032449.14	novel	532	3	NA	NA	-762	6775	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	607.684859848334	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACCAAAACTCTCAATAC	NA	False	NA	NA	False	AATAAA	-17	NA	96968076	96950238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96950709_96958594_96961293_96962245_96962536_96967109
ES.35895.30	chr9	-	4851	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	450.58517507792	1169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCTTCATACCTTGAA	NA	False	NA	NA	False	TATAAA	-15	NA	96993180	96957478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.31	chr9	-	5407	8	NIC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	39	139	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	394.802973336197	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCTTCATACCTTGAA	NA	False	NA	NA	False	TATAAA	-15	NA	96993171	96957478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.32	chr9	-	10019	3	FSM	ENSMUSG00000032449.14	ENSMUST00000148995.8	532	3	-5838	-3649	-955	11	multi-exon	FALSE	canonical	3	1282	junction_1	9	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGGTGATATCATTGT	NA	False	NA	7	True	ATTAAA	-33	NA	96973152	96957606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109
ES.35895.33	chr9	-	4791	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	11	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	476.470355845985	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGGTGATATCATTGT	NA	False	NA	7	True	ATTAAA	-33	NA	96993180	96957606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96981134_96981219_96982127_96982293_96992963
ES.35895.35	chr9	-	4658	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	385.517410072992	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTATAATGGTGATATC	NA	False	NA	2	True	ATTAAA	-43	NA	96993202	96957611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.36	chr9	-	8185	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	30	6	intron_retention	FALSE	canonical	3	669	junction_4	274.76014792704	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTATAATGGTGATATC	NA	False	NA	2	True	ATTAAA	-43	NA	96993180	96957611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.37	chr9	-	4742	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTATAATGGTGATATC	NA	False	NA	2	True	ATTAAA	-43	NA	96993220	96957611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.38	chr9	-	4757	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	4	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	429.397961540341	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTTATAATGGTGATA	NA	False	NA	0	True	ATTAAA	-41	NA	96993180	96957613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.39	chr9	-	4871	11	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	43	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	478.094091157797	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTTATAATGGTGAT	NA	False	NA	-1	True	ATTAAA	-40	NA	96993167	96957614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971894_96972145_96972228_96974510_96974659_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.4	chr9	-	3599	6	NNC	ENSMUSG00000032449.14	novel	894	3	NA	NA	-1636	6773	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	576.328933856353	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCACCAAAACTCTCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	96973833	96950240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96950709_96958594_96958710_96960923_96961293_96962245_96962536_96967109_96967177_96971543
ES.35895.40	chr9	-	4623	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	3	601	3	3	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTTATAATGGTGAT	NA	False	NA	-1	True	ATTAAA	-40	NA	96993207	96957614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.41	chr9	-	4607	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	506.3856318689	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTTTATAATGGTGAT	NA	False	NA	-1	True	ATTAAA	-40	NA	96993093	96957614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96981134_96981233_96982127_96982293_96992963
ES.35895.42	chr9	-	4741	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	2	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	301.8849625474	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATTTTATAATGGTGA	NA	False	NA	-2	True	ATTAAA	-39	NA	96993182	96957615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.43	chr9	-	4681	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	197	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	451.988576702319	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGATTTTATAATGGT	NA	False	NA	-4	True	ATTAAA	-37	NA	96992843	96957617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992641
ES.35895.44	chr9	-	4609	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	437.412626195856	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993182	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975113_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.45	chr9	-	4650	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	465.741015884956	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993182	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.46	chr9	-	4710	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	450.58517507792	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993180	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.48	chr9	-	4792	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	369.939437611077	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993180	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.49	chr9	-	4695	8	FSM	ENSMUSG00000032449.14	ENSMUST00000153070.8	1203	8	-142	-3350	8	-2	multi-exon	FALSE	canonical	3	41	junction_3	473.47189214679	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993202	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.50	chr9	-	4776	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	450.58517507792	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAAGATTTTATAATG	NA	False	NA	-6	True	ATTAAA	-35	NA	96993180	96957619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.51	chr9	-	4528	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	487.857288943191	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGATTTTATAAT	NA	False	NA	-7	True	ATTAAA	-34	NA	96993203	96957620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96993142
ES.35895.52	chr9	-	4916	11	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	492.957006238881	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993181	96957621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96972145_96972228_96975129_96975231_96979155_96979234_96981134_96981219_96982127_96982293_96992963
ES.35895.54	chr9	-	4255	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	292.232451236264	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993033	96957621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.55	chr9	-	4504	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	478.156109765548	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993079	96957621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971913_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.56	chr9	-	4833	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	458.242778933225	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993182	96957621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96971930_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.57	chr9	-	4652	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_3	313.821826661067	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATCTTAAGATTTTATAA	NA	False	NA	-8	True	ATTAAA	-33	NA	96993202	96957621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.58	chr9	-	4844	5	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	-88	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	644.282304195917	1162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96972285	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96970921_96970998_96971543
ES.35895.59	chr9	-	4828	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	455.812170060212	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993170	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96974510_96974659_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.6	chr9	-	177	1	Intergenic	novelGene_29216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	96952525	96952348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_96952300_96952500
ES.35895.60	chr9	-	4763	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	477.018932253632	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993180	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971617_96971872_96971909_96974075_96974143_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.61	chr9	-	4729	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	430.738156395507	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993228	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.63	chr9	-	3473	4	NNC	ENSMUSG00000032449.14	novel	532	3	NA	NA	-1055	-6	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	561.962236770012	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96968369	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96960947_96961293_96962245_96962536_96967109
ES.35895.64	chr9	-	6387	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-54	-6	intron_retention	FALSE	canonical	3	99	junction_1	379.506984152345	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993140	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96960947_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.65	chr9	-	9432	3	NNC	ENSMUSG00000032449.14	novel	532	3	NA	NA	-344	-6	intron_retention	FALSE	canonical	3	509	junction_1	395.5	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96972541	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109
ES.35895.66	chr9	-	4668	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	502.676550363864	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993177	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96981134_96981219_96982127_96982293_96992963
ES.35895.67	chr9	-	4727	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	460.552432639191	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993180	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971894_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.68	chr9	-	4726	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-6	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	489.736903219474	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTTAAGATTTTAT	NA	False	NA	-10	True	ATTAAA	-31	NA	96993180	96957623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96971930_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.69	chr9	-	7839	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	30	-11	intron_retention	FALSE	canonical	3	88	junction_3	411.526730602035	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971872_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.7	chr9	-	6397	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	40	1025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	450.58517507792	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTTTTTTAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	96993170	96955988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.71	chr9	-	7876	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	intron_retention	FALSE	canonical	3	117	junction_4	374.856489546469	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.72	chr9	-	2957	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	27	-11	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	459.910404586495	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993183	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96960923_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.73	chr9	-	4630	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	24	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	510.050897820352	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993186	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96978546_96978589_96979155_96979234_96982127_96982293_96992963
ES.35895.75	chr9	-	5294	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	451.7913099597	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96978546_96979234_96982127_96982293_96992963
ES.35895.76	chr9	-	4719	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	23	-11	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_4	445.699380188037	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993187	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971617_96971872_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.77	chr9	-	4744	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	28	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	391.536316961786	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993182	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96971543_96971647_96971913_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.79	chr9	-	4367	6	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	47	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	534.215537026021	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993163	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96993021
ES.35895.8	chr9	-	6306	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	47	1023	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	1170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTTTTTTTAAAGGA	NA	False	NA	NA	False	NA	NA	NA	96993163	96955990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.80	chr9	-	4524	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422.82352627899	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993177	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961052_96961209_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.81	chr9	-	2650	4	NNC	ENSMUSG00000032449.14	novel	532	3	NA	NA	-729	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	607.684859848334	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96968043	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96958710_96960947_96961293_96962245_96962536_96967109
ES.35895.82	chr9	-	7566	7	NIC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	intron_retention	FALSE	canonical	3	41	junction_3	425.233530610599	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96972145_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.83	chr9	-	4422	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	56	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	504.6456402489	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993154	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96982176_96982293_96992963
ES.35895.84	chr9	-	2936	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	33	-11	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	403.011708886975	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993177	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96960947_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.85	chr9	-	2860	8	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	442.096581931032	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96960923_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.86	chr9	-	4578	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	-30	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	422.82352627899	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993116	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982218_96982260_96982293_96992963
ES.35895.87	chr9	-	2738	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	422.82352627899	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993202	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959202_96961170_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.88	chr9	-	4666	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	364.017084077108	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	False	NA	-15	True	ATTAAA	-26	NA	96993180	96957628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96959406_96959465_96961293_96962204_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.89	chr9	-	4575	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	50	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	437.412626195856	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGTATCTTAAGA	NA	False	NA	-16	True	ATTAAA	-25	NA	96993160	96957629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967191_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.9	chr9	-	5552	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	31	-356	31	356	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGGTAGGTGGGGCTT	NA	False	NA	-2	True	NA	NA	NA	96993179	96956657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.90	chr9	-	7696	8	NIC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-12	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	403.97443847201	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTGTATCTTAAGA	NA	False	NA	-16	True	ATTAAA	-25	NA	96993180	96957629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96974659_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.92	chr9	-	4755	10	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-15	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	459.212718669305	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGTGTATCTTA	NA	False	NA	-19	True	ATTAAA	-22	NA	96993181	96957632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971930_96972145_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.93	chr9	-	4363	5	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	30	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	530.745407422429	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAAAATGTGTATCTT	NA	False	NA	-20	True	ATTAAA	-21	NA	96993180	96957633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967185_96982170_96982293_96992963
ES.35895.94	chr9	-	4643	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	18	-20	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_5	435.788348140471	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTTTTAAAAATGTGTA	NA	False	NA	-24	True	ATTAAA	-17	NA	96993192	96957637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96971894_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.95	chr9	-	5026	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	29	-26	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	428.243195363336	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGTGCTTTTAAAAA	NA	False	NA	-30	True	ATTAAA	-11	NA	96993181	96957643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96971872_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.96	chr9	-	4953	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	30	-32	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	429.588738650119	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAATGTGCTTT	NA	False	NA	-36	True	ATTAAA	-5	NA	96993180	96957649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971872_96972228_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.97	chr9	-	4436	6	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	30	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	477.004654065346	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAATGTGCTTT	NA	False	NA	-36	True	ATTAAA	-5	NA	96993180	96957649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96982176_96982293_96992963
ES.35895.98	chr9	-	4067	9	NNC	ENSMUSG00000032449.14	novel	1203	8	NA	NA	43	-32	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	442.725366338998	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAATGTGCTTT	NA	False	NA	-36	True	ATTAAA	-5	NA	96993167	96957649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96958077_96958594_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ES.35895.99	chr9	-	4521	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	29	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	435.915384245867	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTCAAAAAATTAAAAT	NA	False	NA	-43	True	NA	NA	NA	96993181	96957656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971611_96979155_96979234_96982127_96982293_96992963
ES.35896.1	chr9	-	176	1	Intergenic	novelGene_29226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97032876	97032700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_97032700_97032900
ES.35897.1	chr9	+	177	1	Intergenic	novelGene_29227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	98002934	98003111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98002900_98003100
ES.35898.1	chr9	+	2172	5	NIC	ENSMUSG00000032456.14	novel	2166	5	NA	NA	-20	-11	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	2.27760839478607	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATGAAAAGTTTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	98178615	98293476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98179034_98236074_98236218_98281508_98281693_98285586_98285667_98292129
ES.35898.2	chr9	+	2543	4	NNC	ENSMUSG00000032456.14	novel	349	3	NA	NA	67797	-17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.02768199119819	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACTAATGAAAAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	98246511	98293470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98247450_98281508_98281693_98285586_98285667_98292129
ES.35898.3	chr9	+	153	1	Intergenic	novelGene_29229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	98255686	98255839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98255700_98255800
ES.35899.1	chr9	-	2278	1	Intergenic	novelGene_29228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAGAAGGAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	98202688	98200410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_98200400_98202700
ES.359.1	chr1	-	5564	4	FSM	ENSMUSG00000050967.6	ENSMUST00000053355.6	6091	4	522	5	522	-5	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACGTTTTAGATTTCC	NA	False	NA	NA	False	AATAAA	-15	NA	39690120	39657578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_39662412_39664037_39664152_39686943_39687114_39689673
ES.3590.1	chr10	+	3516	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-24	0	intron_retention	FALSE	canonical	3	348	junction_6	43.3330228007683	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289248	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
ES.3590.10	chr10	+	3437	17	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	12	-5	intron_retention	FALSE	non_canonical	0	0	junction_8	115.449512098363	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATTTTAAAGTGTCAT	NA	False	NA	16	True	AATACA	-15	NA	93289284	93320731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305058_93307147_93307229_93307715_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.11	chr10	+	5540	16	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	12	-1	intron_retention	FALSE	canonical	3	348	junction_6	46.1236984158421	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTGTCATTTTT	NA	False	NA	20	True	AATACA	-19	NA	93289284	93320735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93318929_93320524
ES.3590.13	chr10	+	2975	17	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	13	0	intron_retention	FALSE	canonical	3	348	junction_6	43.0671260214795	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289285	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.14	chr10	+	3853	16	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	13	0	intron_retention	FALSE	canonical	3	56	junction_14	106.498951481537	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289285	93320737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
ES.3590.15	chr10	+	4045	17	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	19	-1	intron_retention	FALSE	canonical	3	348	junction_6	44.66607878189	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAAATTG	NA	False	NA	-36	True	NA	NA	NA	93289291	93320679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318929_93320524
ES.3590.16	chr10	+	4624	2	FSM	ENSMUSG00000015889.9	ENSMUST00000215224.2	629	2	-16	-3979	-16	21	multi-exon	FALSE	canonical	3	414	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGGAAACCTCGAGTG	NA	False	NA	NA	False	AAAACA	-42	NA	93289296	93300068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93289531_93295678
ES.3590.17	chr10	+	4570	16	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-11	0	intron_retention	FALSE	canonical	3	348	junction_6	44.4790087819212	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289301	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.18	chr10	+	4390	16	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-10	0	intron_retention	FALSE	canonical	3	348	junction_6	44.4790087819212	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289302	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.19	chr10	+	3657	19	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-10	9	intron_retention	FALSE	canonical	1	2	junction_16	138.467059415624	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTTTGGTTTTTTGTT	NA	False	NA	31	True	AATACA	-30	NA	93289302	93320746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93317335_93317388_93318111_93318195_93318823
ES.3590.2	chr10	+	2064	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	-24	-11	-24	10	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTTGGTTTTTTGTTG	NA	False	NA	32	True	AATACA	-31	NA	93289248	93320747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.20	chr10	+	3384	17	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-10	-7	intron_retention	FALSE	canonical	3	21	junction_9	111.010627306578	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTATTTTAAAGTGTC	NA	False	NA	14	True	AATACA	-13	NA	93289302	93320729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
ES.3590.22	chr10	+	4419	16	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	348	junction_6	44.4120103875817	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTGTCATTTTT	NA	False	NA	20	True	AATACA	-19	NA	93289303	93320735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
ES.3590.23	chr10	+	3443	17	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-4	-5	intron_retention	FALSE	non_canonical	0	0	junction_8	115.592208187879	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATTTTAAAGTGTCAT	NA	False	NA	16	True	AATACA	-15	NA	93289308	93320731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305058_93307148_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
ES.3590.24	chr10	+	1980	18	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	112.25036894692	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTATTTTAAAGTGTC	NA	False	NA	14	True	AATACA	-13	NA	93289310	93320729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93307137_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.25	chr10	+	4089	17	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	1	-5	intron_retention	FALSE	canonical	3	56	junction_15	101.737848629455	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATTTTAAAGTGTCAT	NA	False	NA	16	True	AATACA	-15	NA	93289313	93320731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93316649_93318823_93318929_93320524
ES.3590.26	chr10	+	1911	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	111.80287274011	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTATTTTAAAGTGT	NA	False	NA	13	True	AATACA	-12	NA	93289313	93320728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.27	chr10	+	1974	18	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	112.25036894692	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTATTTTAAAGTGTC	NA	False	NA	14	True	AATACA	-13	NA	93289313	93320729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305068_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.28	chr10	+	1992	19	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	108.197992382278	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTGTCATTTTT	NA	False	NA	20	True	AATACA	-19	NA	93289324	93320735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304601_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.29	chr10	+	10740	1	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	16	21	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGGAAACCTCGAGTG	NA	False	NA	NA	False	AAAACA	-42	NA	93289328	93300068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289300_93300100
ES.3590.3	chr10	+	1990	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-22	21	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGTTGTTGTTTAT	NA	False	NA	43	True	AATACA	-42	NA	93289250	93320758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
ES.3590.30	chr10	+	5432	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	16	0	intron_retention	FALSE	canonical	3	348	junction_6	42.733826540527	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289328	93320737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.31	chr10	+	3604	13	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-6885	0	intron_retention	FALSE	non_canonical	0	0	junction_5	160.347712452934	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93300320	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305058_93307147_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93316649_93318823_93318929_93320524
ES.3590.32	chr10	+	1232	13	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-2257	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	172.650638734861	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93304948	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93317335_93317388_93318111_93318195_93318823_93318929_93320524
ES.3590.4	chr10	+	7471	13	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-21	4	intron_retention	FALSE	canonical	3	348	junction_6	49.4340188758938	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTCATTTTTGGTTTT	NA	False	NA	26	True	AATACA	-25	NA	93289251	93320741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93310442_93310779_93310851_93314308_93314364_93316552_93318929_93320524
ES.3590.5	chr10	+	2053	18	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-21	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	112.25036894692	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTTTGGTTTTTTGTT	NA	False	NA	31	True	AATACA	-30	NA	93289251	93320746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305058_93307147_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.6	chr10	+	3483	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	348	junction_6	43.3545773496021	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289251	93320737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.7	chr10	+	2198	19	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	109.279867799027	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289258	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295965_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.8	chr10	+	3545	19	NNC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-11	17	intron_retention	FALSE	non_canonical	0	0	junction_13	169.867559158072	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTTGTTGTTGTTGT	NA	False	NA	39	True	AATACA	-38	NA	93289261	93320754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93289531_93295678_93295810_93295910_93295965_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93310443_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ES.3590.9	chr10	+	4932	17	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	-8	0	intron_retention	FALSE	canonical	3	348	junction_6	44.6594317445934	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289264	93320736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
ES.35900.1	chr9	+	815	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1810	27	1810	-27	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATGTGTTTTGGAGG	4695	False	NA	14	True	AATAAA	-15	NA	98306823	98328601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
ES.35900.2	chr9	+	176	1	Intergenic	novelGene_29230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGACCT	NA	False	NA	NA	False	NA	NA	NA	98326050	98326226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98326000_98326200
ES.35901.1	chr9	-	155	1	Intergenic	novelGene_29231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	98438531	98438376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_98438400_98438500
ES.35902.1	chr9	-	3037	1	FSM	ENSMUSG00000051074.5	ENSMUST00000194714.2	1152	1	14	-1899	-5	1668	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGAGTTTGTAGAGC	NA	False	NA	NA	False	AATAAA	-11	NA	98445650	98442613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98442600_98445600
ES.35903.1	chr9	+	3085	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-33	-2	-23	2	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGTTTCCTTCCTAG	NA	False	NA	21	True	CATAAA	-22	NA	98445750	98470437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.10	chr9	+	4642	23	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	1	1628	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	165.912229111042	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAACTGACAAAAGGACT	NA	False	NA	NA	False	ATTAAA	-23	NA	98445774	98472063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097_98471476_98471520
ES.35903.11	chr9	+	3433	20	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	1	-5	intron_retention	FALSE	canonical	3	669	junction_10	51.2420252561759	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445774	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464951_98467035_98467147_98467984_98468200_98469092_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.13	chr9	+	2980	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	169.70435810844	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445776	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463259_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.15	chr9	+	3942	21	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	669	junction_10	52.5256127998522	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTCTTGAGTTTCCTT	NA	False	NA	16	True	CATAAA	-17	NA	98445781	98470432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.17	chr9	+	2978	21	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	172.549963778611	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445781	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469813_98469883_98470097
ES.35903.19	chr9	+	8848	17	Fusion	ENSMUSG00000032458.7_ENSMUSG00000102861.2	novel	3050	22	NA	NA	-2	801	intron_retention	FALSE	canonical	3	669	junction_10	38.4475596592293	590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTCTCTCTGGATCTG	NA	False	NA	NA	False	AATAAA	-27	NA	98445781	98474604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464951_98467035_98467147_98467984_98469459_98469604
ES.35903.2	chr9	+	3228	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	-23	-155	-13	155	multi-exon	FALSE	canonical	3	669	junction_10	53.4673910412871	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTGTCGGACTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	98445760	98470590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.20	chr9	+	3031	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.443600607542	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445785	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445865_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.21	chr9	+	3045	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	169.552766387249	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGAAAGACTCTTGAGT	NA	False	NA	10	True	CATAAA	-11	NA	98445785	98470426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453540_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.22	chr9	+	3025	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	169.62224269069	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCTTGAGTTTCCT	NA	False	NA	15	True	CATAAA	-16	NA	98445786	98470431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450178_98452370_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.24	chr9	+	2740	21	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	173.401095728949	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445791	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464367_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.27	chr9	+	3813	21	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	14	-7	intron_retention	FALSE	canonical	3	669	junction_9	54.7570999962562	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACTCTTGAGTTT	NA	False	NA	12	True	CATAAA	-13	NA	98445797	98470428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.3	chr9	+	3054	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.486753574397	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAAGACTCTTGAGTT	NA	False	NA	11	True	CATAAA	-12	NA	98445763	98470427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452450_98452647_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.31	chr9	+	3008	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	169.62224269069	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTCTTGAGTTTCCTT	NA	False	NA	16	True	CATAAA	-17	NA	98445810	98470432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452370_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.32	chr9	+	2949	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	167.378845749799	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	19	True	CATAAA	-20	NA	98445810	98470435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469351_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.33	chr9	+	3010	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	168.76793765418	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCTTGAGTTTCCT	NA	False	NA	15	True	CATAAA	-16	NA	98445811	98470431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469666_98469813_98469883_98470097
ES.35903.34	chr9	+	2878	21	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	173.876795461614	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	19	True	CATAAA	-20	NA	98445811	98470435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.35	chr9	+	960	7	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	36	14062	36	-6902	5prime_fragment	FALSE	canonical	3	687	junction_6	32.6785692601266	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCACCATTCTAGTGTCT	NA	False	NA	NA	False	AATAAA	-12	NA	98445819	98456373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118
ES.35903.40	chr9	+	2741	20	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	6638	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	177.794350374051	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGACTCTTGAGTTT	NA	False	NA	12	True	CATAAA	-13	NA	98452421	98470428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464943_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.41	chr9	+	2207	15	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13226	3	-2994	-3	3prime_fragment	FALSE	canonical	3	669	junction_3	61.8683592602149	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTCTTGAGTTTCCTT	NA	False	NA	16	True	CATAAA	-17	NA	98459009	98470432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.42	chr9	+	2070	14	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	13585	8	-2635	-8	3prime_fragment	FALSE	canonical	3	669	junction_2	62.4936446472901	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAAAGACTCTTGAGTT	NA	False	NA	11	True	CATAAA	-12	NA	98459368	98470427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.43	chr9	+	6219	9	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-2520	-5	intron_retention	FALSE	canonical	3	694	junction_1	54.8815485842009	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98459483	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.44	chr9	+	1973	3	FSM	ENSMUSG00000032458.7	ENSMUST00000187336.2	699	3	-725	-549	-725	-4	multi-exon	FALSE	canonical	3	768	junction_1	19	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCTTGAGTTTCCT	NA	False	NA	15	True	CATAAA	-16	NA	98468172	98470431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98469459_98469604_98469674_98469813
ES.35903.5	chr9	+	7416	18	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	674	junction_8	47.6259938911268	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGACTCTTGAGTTTC	NA	False	NA	13	True	CATAAA	-14	NA	98445769	98470429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98459154_98459380_98459581_98461033_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.6	chr9	+	5896	16	NIC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_7	196.264515386761	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGACTCTTGAGTTTCC	NA	False	NA	14	True	CATAAA	-15	NA	98445769	98470430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98464951_98467035_98468200_98469092_98469459_98469604_98469674_98469813_98469883_98470097
ES.35903.8	chr9	+	3062	22	NNC	ENSMUSG00000032458.7	novel	3050	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	169.640275669582	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	19	True	CATAAA	-20	NA	98445770	98470435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455626_98456110_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ES.35904.1	chr9	-	3624	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-7	9	intron_retention	FALSE	canonical	3	515	junction_4	22.0661883130428	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGTTTTTTCCTGCTTT	NA	False	NA	0	True	ATTAAA	-29	NA	98483720	98470773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.2	chr9	-	3693	7	NNC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_3	201.417270030816	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483718	98470782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98470980_98472087_98474754_98476125_98476210_98476642_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.3	chr9	-	3523	8	NNC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.671233145046	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483715	98470782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98470980_98472087_98472197_98472283_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.4	chr9	-	5499	5	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-6	0	intron_retention	FALSE	canonical	3	515	junction_2	14.6692706021806	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483719	98470782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98470980_98472087_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.5	chr9	-	1206	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	-12	3	-12	-3	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCTGTAATTCGTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98483725	98470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.6	chr9	-	1027	7	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	204.162244850076	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCTGTAATTCGTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98483711	98470785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98480187_98480352_98483525
ES.35904.7	chr9	-	4119	6	NIC	ENSMUSG00000032459.10	novel	1197	8	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	515	junction_3	13.8072444752746	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTTCTGTAATTCGT	NA	False	NA	-13	True	ATTAAA	-16	NA	98483715	98470786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98470980_98472087_98474754_98476125_98476867_98478872_98479038_98480187_98480352_98483525
ES.35904.8	chr9	-	1060	3	ISM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	-16	7563	-16	-1117	5prime_fragment	FALSE	canonical	3	535	junction_1	10	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGTCATGGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	98483729	98478345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_98479038_98480187_98480352_98483525
ES.35905.1	chr9	-	207	1	Intergenic	novelGene_29232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTTTATTAAGTCC	NA	False	NA	NA	False	AAGAAA	-7	NA	98613050	98612843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_98612800_98613000
ES.35906.1	chr9	-	5844	3	NNC	ENSMUSG00000102013.2	novel	1483	3	NA	NA	-12021	4415	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTCCTGGAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	98714161	98626236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98631851_98640205_98640336_98714061
ES.35907.1	chr9	+	1346	1	FSM	ENSMUSG00000091080.3	ENSMUST00000170349.3	883	1	-158	-305	-158	305	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATGTTGCTGTCTGT	NA	False	NA	NA	False	TATAAA	-13	NA	98724397	98725743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98724400_98725700
ES.35908.1	chr9	-	4102	3	Antisense	novelGene_ENSMUSG00000091080.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98725344	98717441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_98720937_98723451_98723530_98724815
ES.35909.1	chr9	+	173	1	Intergenic	novelGene_29233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGTTGGCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	98725810	98725983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98725800_98726000
ES.3591.1	chr10	+	2306	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	301	2712	266	-74	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACAATTCCATAGGTT	NA	False	NA	NA	False	TATAAA	-22	NA	93324930	93352454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
ES.3591.2	chr10	+	1912	17	ISM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	1964	2723	1929	-85	3prime_fragment	FALSE	canonical	2	6	junction_12	2.52487623459052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAGCCACAA	NA	False	NA	NA	False	TATAAA	-11	NA	93326593	93352443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
ES.3591.3	chr10	+	2069	17	ISM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	1967	2563	1932	75	3prime_fragment	FALSE	canonical	2	6	junction_12	2.52487623459052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACGTTTCAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	93326596	93352603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
ES.3591.4	chr10	+	2978	11	ISM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	1988	16571	1953	2076	internal_fragment	FALSE	canonical	2	7	junction_9	2.0591260281974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGTTCATGTTCATGG	NA	False	NA	NA	False	AATAGA	-14	NA	93326617	93338595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478
ES.35910.1	chr9	+	3512	1	FSM	ENSMUSG00000063058.3	ENSMUST00000071302.3	881	1	-43	-2588	-43	2588	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAAGACTCTAGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	98738503	98742015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98738500_98742000
ES.35910.2	chr9	+	2734	2	Genic_Genomic	ENSMUSG00000063058.3	novel	881	1	NA	NA	-18	2588	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAAGACTCTAGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	98738528	98742015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_98740900_98741652
ES.35910.3	chr9	+	2684	2	Genic_Genomic	ENSMUSG00000063058.3	novel	881	1	NA	NA	40	2588	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAAGACTCTAGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	98738586	98742015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_98740915_98741659
ES.35911.1	chr9	+	166	1	Intergenic	novelGene_29234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACTGAGAGAGAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	98745875	98746041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98745900_98746000
ES.35912.1	chr9	+	1887	1	FSM	ENSMUSG00000090470.3	ENSMUST00000167951.3	1817	1	-16	-54	-16	54	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACCAAATTCCCTCTT	NA	False	NA	60	True	NA	NA	NA	98746803	98748690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98746800_98748700
ES.35912.2	chr9	+	4794	2	Genic_Genomic	ENSMUSG00000090470.3	novel	1817	1	NA	NA	141	4613	multi-exon	TRUE	canonical	0	0	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGCCAACAGCCTTCT	NA	False	NA	NA	False	AAAAAG	-4	NA	98746960	98753249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_98750447_98751941
ES.35912.3	chr9	+	1714	2	Genic_Genomic	ENSMUSG00000090470.3	novel	1817	1	NA	NA	143	65057	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAGGATCAGATGGT	NA	False	NA	NA	False	GATAAA	-42	NA	98746962	98813693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_98748642_98813658
ES.35912.4	chr9	+	4666	1	Antisense	novelGene_ENSMUSG00000100839.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATTAGAAACAGTTACT	NA	False	NA	NA	False	AATAAA	-18	NA	98750643	98755309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_98750600_98755300
ES.35912.5	chr9	+	3938	1	Intergenic	novelGene_29235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98756547	98760485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98756500_98760500
ES.35912.6	chr9	+	4794	1	FSM	ENSMUSG00000074123.2	ENSMUST00000098460.2	1504	1	-3280	-10	-3280	10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATGCCATAATTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	98781891	98786685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98781900_98786700
ES.35913.1	chr9	-	3857	1	Intergenic	novelGene_29236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	98812885	98809028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_98809000_98812900
ES.35914.1	chr9	+	181	1	Intergenic	novelGene_29237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGACCAAATATTCT	NA	False	NA	NA	False	NA	NA	NA	98826156	98826337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98826200_98826300
ES.35915.1	chr9	+	3143	1	FSM	ENSMUSG00000050397.5	ENSMUST00000051312.5	3256	1	113	0	113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCTTGGAAGCTGCAA	NA	False	NA	NA	False	TATAAA	-14	NA	98837453	98840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98837500_98840600
ES.35916.1	chr9	-	3977	8	NNC	ENSMUSG00000097072.8	novel	3095	8	NA	NA	-1358	617	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.699854212223765	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTCTATAACTGGTAT	NA	False	NA	NA	False	NA	NA	NA	98838710	98831216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98832776_98833037_98833135_98833239_98833363_98834906_98835010_98835657_98835911_98836080_98836172_98836256_98836288_98836990
ES.35916.2	chr9	-	3748	7	NNC	ENSMUSG00000097072.8	novel	3095	8	NA	NA	-693	611	intron_retention	FALSE	canonical	0	0	junction_5	0.577350269189626	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTAGCTTTCTATAAC	NA	False	NA	NA	False	NA	NA	NA	98838045	98831222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98832515_98833037_98833135_98833239_98833363_98834906_98835010_98835657_98835911_98836080_98836172_98836256
ES.35917.1	chr9	+	1018	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	2	-1	1	1	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTTTGGTTTCATGT	3546	False	NA	10	True	AATAAA	-24	NA	98868427	98884075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ES.35917.2	chr9	+	1054	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	18	-269	-9	-3	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGTGGGTTTGGTTTC	3563	False	NA	6	True	AATAAA	-20	NA	98868444	98884071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ES.35917.3	chr9	+	6557	4	NNC	ENSMUSG00000032463.11	novel	1019	5	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_1	141.011425856993	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGGGTTTGGTTTCA	3563	False	NA	7	True	AATAAA	-21	NA	98868444	98884072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98874258_98874565_98874795_98881019_98881070_98883607
ES.35917.4	chr9	+	1141	7	NNC	ENSMUSG00000032463.11	novel	803	6	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	140.622129600335	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGTGGGTTTGGTTTC	3566	False	NA	6	True	AATAAA	-20	NA	98868447	98884071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_98868566_98872967_98873025_98873815_98873906_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ES.35917.5	chr9	+	6583	4	NIC	ENSMUSG00000032463.11	novel	1019	5	NA	NA	-3	1	intron_retention	FALSE	canonical	3	266	junction_1	19.4307888557196	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGGTTTGGTTTCATGT	3569	False	NA	10	True	AATAAA	-24	NA	98868450	98884075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_98874287_98874565_98874795_98881019_98881070_98883607
ES.35917.6	chr9	+	3041	5	FSM	ENSMUSG00000032463.11	ENSMUST00000185472.2	568	5	-2143	-330	-2143	-3	multi-exon	FALSE	canonical	2	3	junction_1	124.26458666893	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGTGGGTTTGGTTTC	6859	False	NA	6	True	AATAAA	-20	NA	98871740	98884071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_98873906_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ES.35917.7	chr9	+	741	3	ISM	ENSMUSG00000032463.11	ENSMUST00000185472.2	568	5	680	-326	680	-7	3prime_fragment	FALSE	canonical	3	283	junction_2	15	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCACAGAGGTGGGTTTGG	9682	False	NA	2	True	AATAAA	-16	NA	98874563	98884067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_98874795_98881019_98881070_98883607
ES.35918.1	chr9	+	175	1	Intergenic	novelGene_29238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACAAAAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	98971660	98971835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_98971700_98971800
ES.35919.1	chr9	+	9452	2	Antisense	novelGene_ENSMUSG00000032462.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGGGAGTGGAATTAAG	NA	False	NA	NA	False	NA	NA	NA	99007728	99018182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_99008601_99009602
ES.3592.1	chr10	-	182	1	Intergenic	novelGene_2746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGTGAACAGGGGCC	1205	False	NA	NA	False	NA	NA	NA	93378920	93378738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93378700_93378900
ES.35920.1	chr9	-	6647	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-125	-44	-125	44	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTAATGTCCCTTGTCC	NA	False	NA	41	True	NA	NA	NA	99022265	98918662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.11	chr9	-	8389	22	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-114	-1	intron_retention	FALSE	canonical	3	182	junction_18	20.6035903790562	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGGGTGTCTTCTTTT	NA	False	NA	-2	True	AATAAA	-24	NA	99022254	98920454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.12	chr9	-	5059	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-133	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	65.63904611586	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGGGTGTCTTCTTTT	NA	False	NA	-2	True	AATAAA	-24	NA	99022273	98920454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98983708_98983905_98987583_98987771_99004336_99004430_99022043
ES.35920.13	chr9	-	6380	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-105	-2	intron_retention	FALSE	canonical	1	2	junction_5	65.8342135010117	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTGGGTGTCTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	99022245	98920455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98934531_98934608_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.14	chr9	-	4902	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-125	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	50.3192454735597	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGTGGGTGTCTTCTTT	NA	False	NA	-3	True	AATAAA	-23	NA	99022265	98920455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923155_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.16	chr9	-	4887	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-87	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.3192454735597	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTGGGTGTCTTCTT	NA	False	NA	-4	True	AATAAA	-22	NA	99022227	98920456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923179_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.17	chr9	-	5087	23	NIC	ENSMUSG00000032462.15	novel	5045	24	NA	NA	-105	-3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_22	65.9991391128427	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTGGGTGTCTTCTT	NA	False	NA	-4	True	AATAAA	-22	NA	99022245	98920456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99021563
ES.35920.18	chr9	-	5313	24	NIC	ENSMUSG00000032462.15	novel	5045	24	NA	NA	-105	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_23	50.4068888381741	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATGTGGGTGTCTTCTT	NA	False	NA	-4	True	AATAAA	-22	NA	99022245	98920456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021563
ES.35920.19	chr9	-	4662	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-87	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	76.9683606712748	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACATGTGGGTGTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	99022227	98920459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98934531_98934608_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.2	chr9	-	6483	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-80	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.681992564021	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTAGCCAGTATT	NA	False	NA	3	True	AATAAA	-18	NA	99022220	98918700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943847_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.20	chr9	-	5256	24	NNC	ENSMUSG00000032462.15	novel	5045	24	NA	NA	-105	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	65.4468427424329	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACATGTGGGTGTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	99022245	98920459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975149_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021563
ES.35920.22	chr9	-	4704	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-130	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	51.6691891166269	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACATGTGGGTGTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	99022270	98920459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983303_98987583_98987771_99004336_99004430_99022043
ES.35920.23	chr9	-	4822	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-105	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	51.681992564021	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACATGTGGGTGTCTT	NA	False	NA	-7	True	AATAAA	-19	NA	99022245	98920459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943920_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.24	chr9	-	6275	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-82	-8	intron_retention	FALSE	canonical	3	182	junction_19	21.1615197317058	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGACATGTGGGTGTC	NA	False	NA	-9	True	AATAAA	-17	NA	99022222	98920461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.25	chr9	-	4705	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	17546	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	66.4735545864465	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGACATGTGGGTGTC	NA	False	NA	-9	True	AATAAA	-17	NA	99004432	98920461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98934531_98934608_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336
ES.35920.26	chr9	-	4580	22	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	53.3911676220454	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGACATGTGGGTGTC	NA	False	NA	-9	True	AATAAA	-17	NA	99022246	98920461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.27	chr9	-	4894	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-32	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.1808018709284	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGGGGACATGTGGG	NA	False	NA	-13	True	AATAAA	-13	NA	99022172	98920465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953257_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.28	chr9	-	7489	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-64	-28	intron_retention	FALSE	canonical	3	157	junction_2	25.2207198696588	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGGTGGTTTCATCTG	NA	False	NA	16	True	ATTAAA	-43	NA	99022204	98920481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.3	chr9	-	6439	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	51.6691891166269	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTAGCCAGTATT	NA	False	NA	3	True	AATAAA	-18	NA	99022246	98918700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983303_98987583_98987771_99004336_99004430_99022043
ES.35920.30	chr9	-	4762	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-127	-42	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	50.5256303223493	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGTCAAATAAATG	NA	False	NA	2	True	ATTAAA	-29	NA	99022267	98920495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975149_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.31	chr9	-	5162	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-127	-42	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	65.9691742184935	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGTCAAATAAATG	NA	False	NA	2	True	ATTAAA	-29	NA	99022267	98920495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975149_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021643
ES.35920.34	chr9	-	4481	22	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-75	-46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.7426038401064	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTCTCAGTCAAATA	NA	False	NA	-2	True	ATTAAA	-25	NA	99022215	98920499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.35	chr9	-	4786	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-94	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.9085320839385	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTCTCAGTCAAATA	NA	False	NA	-2	True	ATTAAA	-25	NA	99022234	98920499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921911_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.37	chr9	-	4798	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	51.371510938514	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATGTTCTCAGTCAAA	NA	False	NA	-4	True	ATTAAA	-23	NA	99022246	98920501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936110_98937361_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.38	chr9	-	3908	19	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	-50	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	57.3706005064365	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAATGTTCTCAGTCA	NA	False	NA	-6	True	ATTAAA	-21	NA	99022246	98920503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98987583_98987771_99004336_99004430_99022043
ES.35920.39	chr9	-	4875	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-131	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	76.8656724241857	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAATGTTCTCAGT	NA	False	NA	-8	True	ATTAAA	-19	NA	99022271	98920505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98934531_98934608_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976706_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.4	chr9	-	6347	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-93	2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTTGTGTAGCCAG	NA	False	NA	-1	True	AATAAA	-14	NA	99022233	98918704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.40	chr9	-	4596	23	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-75	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.2540814273741	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCCTTCTTAATGTTCT	NA	False	NA	-12	True	ATTAAA	-15	NA	99022215	98920509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923179_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.41	chr9	-	4713	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-79	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	51.6980838276969	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTCCTTCTTAATGT	NA	False	NA	-15	True	ATTAAA	-12	NA	99022219	98920512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955846_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.42	chr9	-	4537	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-86	-346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.4912395129156	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAATGGTATTAGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	99022226	98920799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923097_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98934531_98934608_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.43	chr9	-	4544	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-159	2093	-159	-346	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAATGGTATTAGTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	99022299	98920799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.44	chr9	-	4448	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-157	-347	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	52.0213918173243	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCAATGGTATTAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	99022297	98920800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99022043
ES.35920.45	chr9	-	4126	22	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	34285	-347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2036536637677	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCAATGGTATTAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	98987693	98920800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921911_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942235_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583
ES.35920.46	chr9	-	4242	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-86	-349	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTCAATGGTATTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	99022226	98920802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.47	chr9	-	4307	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-105	-349	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	52.5317888804028	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTCAATGGTATTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	99022245	98920802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.48	chr9	-	4486	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-66	-356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	65.7393712363874	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTGATTTTTCAATG	NA	False	NA	NA	False	ATTAAA	-7	NA	99022206	98920809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98974938_98975038_98975149_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.49	chr9	-	4631	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-105	-406	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	65.63904611586	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTTAGTAATATGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	99022245	98920859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98983708_98983910_98987583_98987771_99004336_99004430_99022043
ES.35920.5	chr9	-	4912	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-179	1745	-179	2	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTCTTCTTTTTGG	NA	False	NA	1	True	AATAAA	-27	NA	99022319	98920451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.50	chr9	-	3574	19	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-129	-407	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	57.3706005064365	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATTTTAGTAATATGCC	NA	False	NA	NA	False	AATAAA	-17	NA	99022269	98920860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98987583_98987771_99004336_99004430_99022043
ES.35920.51	chr9	-	4267	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-178	2389	-178	-642	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCAGCCTGTGTTTTCA	NA	False	NA	NA	False	TATAAA	-43	NA	99022318	98921095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.52	chr9	-	4068	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-131	-643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	51.6691891166269	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCAGCCTGTGTTTTC	NA	False	NA	NA	False	TATAAA	-42	NA	99022271	98921096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983303_98987583_98987771_99004336_99004430_99022043
ES.35920.53	chr9	-	3966	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-106	-645	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTCAGCCTGTGTTT	NA	False	NA	NA	False	TATAAA	-40	NA	99022246	98921098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.54	chr9	-	4089	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-74	-662	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	50.5256303223493	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGATGTTTCTTTGGTA	NA	False	NA	NA	False	TATAAA	-23	NA	99022214	98921115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975149_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.55	chr9	-	4252	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	53	-664	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	51.1177150697373	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGATGTTTCTTTGG	NA	False	NA	NA	False	TATAAA	-21	NA	99021925	98921117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021643
ES.35920.56	chr9	-	4040	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-122	2560	-122	-813	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTAATTTTGTTAATAT	NA	False	NA	NA	False	AAGAAA	-21	NA	99022262	98921266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.57	chr9	-	4146	25	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-74	-817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.9732689975434	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCACTAATTTTGTTA	NA	False	NA	NA	False	AAGAAA	-17	NA	99022214	98921270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952052_98952211_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.58	chr9	-	4318	2	ISM	ENSMUSG00000032462.15	ENSMUST00000136965.8	5045	24	48768	33665	48768	29284	intron_retention	FALSE	canonical	3	211	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGCATGCCATTTGAATG	NA	False	NA	NA	False	NA	NA	NA	98973210	98954118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_98955884_98970657
ES.35920.59	chr9	-	3054	9	ISM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-70	35449	-70	29247	5prime_fragment	FALSE	canonical	3	182	junction_5	19.0509186130223	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99022210	98954155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.6	chr9	-	4777	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-122	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	52.6572418947949	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTCTTCTTTTTGG	NA	False	NA	1	True	AATAAA	-27	NA	99022262	98920451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.60	chr9	-	7020	7	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-97	29247	intron_retention	FALSE	canonical	3	182	junction_3	19.3821223468088	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99022237	98954155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98955884_98970657_98970736_98972202_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ES.35920.61	chr9	-	2031	9	NNC	ENSMUSG00000032462.15	novel	631	4	NA	NA	-105	13353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.6235294004567	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGTATTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	99022245	98970049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98970240_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021563
ES.35920.62	chr9	-	1177	5	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-119	8451	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	87.5510565327455	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTCCTAGGTGATTG	NA	False	NA	NA	False	AATAAA	-14	NA	99022259	98974951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99022043
ES.35920.7	chr9	-	4629	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-122	2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTCTTCTTTTTGG	NA	False	NA	1	True	AATAAA	-27	NA	99022262	98920451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
ES.35920.8	chr9	-	5264	24	NNC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-131	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	51.1177150697373	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTCTTCTTTTTGG	NA	False	NA	1	True	AATAAA	-27	NA	99022271	98920451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021643
ES.35920.9	chr9	-	4763	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-125	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	52.0213918173243	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99022265	98920453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99022043
ES.35921.1	chr9	+	399	1	Intergenic	novelGene_29239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99052658	99053057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99052700_99053100
ES.35921.2	chr9	+	236	1	Intergenic	novelGene_29240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAGAGCAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	99052659	99052895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99052700_99052900
ES.35922.1	chr9	-	178	1	Intergenic	novelGene_29241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAGAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	99105129	99104951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99105000_99105100
ES.35923.1	chr9	-	1215	5	NNC	ENSMUSG00000096316.8	novel	785	5	NA	NA	10	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.16599457994296	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATCACGTCTTCGTAC	NA	False	NA	NA	False	AATAAA	-28	NA	99119282	99110995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99111671_99114500_99114551_99116351_99116581_99118285_99118411_99119146
ES.35923.2	chr9	-	1412	1	Intergenic	novelGene_29242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTACTTCTACCATGGTC	NA	False	NA	NA	False	NA	NA	NA	99113635	99112223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99112200_99113600
ES.35923.3	chr9	-	2916	2	NIC	ENSMUSG00000096316.8	novel	785	5	NA	NA	38	-4082	intron_retention	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATTGTTTAACAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	99119254	99115602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99118411_99119146
ES.35924.1	chr9	+	2679	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	-73	0	2	0	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125421	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.10	chr9	+	1831	6	FSM	ENSMUSG00000056267.15	ENSMUST00000185799.7	740	6	73	-1164	-2	-2	multi-exon	FALSE	canonical	3	66	junction_1	121.109867475776	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTGTTCTTGGTCATC	NA	False	NA	5	True	NA	NA	NA	99125492	99146979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ES.35924.11	chr9	+	647	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-21	1142	-2	24	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAATATAAAATGTTA	NA	False	NA	NA	False	AATAAA	-9	NA	99125492	99145839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ES.35924.12	chr9	+	2799	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_11	114.925521241045	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACGTAAGTGTCCCTAG	NA	False	NA	13	True	AATAAA	-18	NA	99125492	99182452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173048_99173191_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.13	chr9	+	3413	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	2	-3	intron_retention	FALSE	canonical	2	26	junction_10	98.1911401298508	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125496	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.14	chr9	+	2651	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	4	-5	intron_retention	FALSE	canonical	2	29	junction_9	88.6342334752775	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACGTAAGTGTCCCTAG	NA	False	NA	13	True	AATAAA	-18	NA	99125498	99182452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.15	chr9	+	2649	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	83.1088001619555	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCCTAGTGACTTAT	NA	False	NA	21	True	AATAAA	-26	NA	99125498	99182460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.16	chr9	+	2323	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-13	-542	-5	542	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTATGACTAAAGCTCATC	NA	False	NA	NA	False	AATACA	-20	NA	99125500	99147523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ES.35924.17	chr9	+	4498	16	NNC	ENSMUSG00000056267.15	novel	2120	16	NA	NA	-5	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	122.308244475451	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACGTAAGTGTCCCTAG	NA	False	NA	13	True	AATAAA	-18	NA	99125500	99182452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178113_99178227_99178328_99178498_99179631_99180216_99180286
ES.35924.18	chr9	+	2570	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	102.567591015114	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125500	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178065_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.19	chr9	+	4554	16	FSM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	-15	-2419	-5	0	multi-exon	FALSE	canonical	3	165	junction_10	76.0584570504089	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125500	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
ES.35924.2	chr9	+	3139	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	110.476241789807	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125474	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180214_99180288_99180636_99181780
ES.35924.20	chr9	+	3391	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-3	intron_retention	FALSE	non_canonical	0	0	junction_15	105.81085719339	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125500	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180226_99180290_99180636_99181780
ES.35924.21	chr9	+	4602	15	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	1	junction_12	112.914000144231	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACGTAAGTGTCCCTAG	NA	False	NA	13	True	AATAAA	-18	NA	99125500	99182452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178065_99178227_99178328_99180636_99181780
ES.35924.22	chr9	+	2133	16	FSM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	-13	0	-3	0	multi-exon	FALSE	canonical	3	165	junction_10	76.0584570504089	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGAGTTGGATTATA	NA	False	NA	NA	False	ATTAAA	-13	NA	99125502	99180038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
ES.35924.23	chr9	+	2470	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	75.3706466404528	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125504	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99128319_99128420_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.24	chr9	+	3755	19	Fusion	ENSMUSG00000103857.2_ENSMUSG00000056267.15	novel	2606	18	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_18	111.588529876507	240	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAGTGAACACTATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	99125504	99192508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780_99181854_99183313_99184718_99192203
ES.35924.25	chr9	+	2446	5	NNC	ENSMUSG00000056267.15	novel	1768	6	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	149.883913413014	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGTGTTCTTGGTCAT	NA	False	NA	4	True	NA	NA	NA	99125505	99146978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128414_99136307_99136431_99144598_99144690_99144878
ES.35924.26	chr9	+	2509	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	-3	intron_retention	FALSE	canonical	2	5	junction_5	107.198175772207	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125505	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.27	chr9	+	3455	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	-3	intron_retention	FALSE	canonical	2	29	junction_9	91.3560555677011	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125505	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.28	chr9	+	2499	5	ISM	ENSMUSG00000056267.15	ENSMUST00000185799.7	740	6	86	-1166	0	0	intron_retention	FALSE	canonical	3	66	junction_1	131.040785635618	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTTGGTCATCAT	NA	False	NA	7	True	NA	NA	NA	99125505	99146981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878
ES.35924.29	chr9	+	2602	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	91.7461519704455	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125505	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157811_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.3	chr9	+	3382	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-8	0	intron_retention	FALSE	canonical	2	26	junction_10	89.2159423813928	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125486	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.31	chr9	+	3400	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	-3	intron_retention	FALSE	canonical	3	165	junction_10	73.8784633282934	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125506	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.32	chr9	+	4289	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	0	intron_retention	FALSE	canonical	2	29	junction_8	91.261382851675	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125506	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.33	chr9	+	4492	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	2	-3	intron_retention	FALSE	canonical	2	26	junction_10	92.1096930597185	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125507	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99180636_99181780
ES.35924.36	chr9	+	4537	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_7	97.5728559704092	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125513	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157811_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99180636_99181780
ES.35924.37	chr9	+	2544	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_10	86.2734848423965	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAACGTAAGTGTCCCTA	NA	False	NA	12	True	AATAAA	-17	NA	99125513	99182451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.38	chr9	+	2398	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	86.2785278907794	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACGTAAGTGTCCCTAG	NA	False	NA	13	True	AATAAA	-18	NA	99125516	99182452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.39	chr9	+	2966	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	97.974045005857	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125522	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125938_99128319_99128420_99136307_99136431_99144601_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.4	chr9	+	2518	18	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.559623764496	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGTAAGTGTCCCTAGT	NA	False	NA	14	True	AATAAA	-19	NA	99125489	99182453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99144598_99144690_99144878_99145003_99145681_99145863_99156623_99156699_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.40	chr9	+	4572	15	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	7	-3	intron_retention	FALSE	canonical	2	29	junction_9	94.5111212546773	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125522	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99180636_99181780
ES.35924.41	chr9	+	2672	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	7	0	intron_retention	FALSE	canonical	2	26	junction_9	98.113454734812	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125522	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.42	chr9	+	2729	19	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	101.482057649081	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGTAAGTGTCCCTAGT	NA	False	NA	14	True	AATAAA	-19	NA	99125522	99182453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99125782_99125938_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.43	chr9	+	4052	13	NNC	ENSMUSG00000056267.15	novel	2120	16	NA	NA	7	-3849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	126.088014894359	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTCAGCATTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	99125522	99174555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159970_99160072_99160162_99160252_99163080_99163156_99171248_99173191_99173577
ES.35924.45	chr9	+	3009	17	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	1	0	intron_retention	FALSE	canonical	2	17	junction_1	103.652646342243	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125535	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125938_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.46	chr9	+	3002	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	91.5844383209318	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125536	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125938_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.47	chr9	+	2834	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	88.8653959297431	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125537	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125938_99128319_99128420_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.48	chr9	+	2319	18	NIC	ENSMUSG00000056267.15	novel	1138	8	NA	NA	185	-412	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	89.442680413686	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTCCTTAATCGTTTCC	NA	False	NA	NA	False	AATAAA	-38	NA	99125763	99182045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125938_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.49	chr9	+	3615	16	NNC	ENSMUSG00000056267.15	novel	1138	8	NA	NA	211	-3	intron_retention	FALSE	canonical	0	0	junction_7	122.316238587614	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125789	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125938_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157811_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.5	chr9	+	2181	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	-5	430	-5	-430	multi-exon	FALSE	canonical	3	165	junction_10	72.0150887688172	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTGAGTTAACTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	99125489	99182027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.50	chr9	+	2606	17	ISM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	2772	4	-73	-4	3prime_fragment	FALSE	canonical	3	165	junction_9	74.142994232429	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGTAAGTGTCCCTAGT	NA	False	NA	14	True	AATAAA	-19	NA	99128266	99182453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.51	chr9	+	3713	1	Intergenic	novelGene_29243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99137701	99141414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99137700_99141400
ES.35924.52	chr9	+	239	1	Genic_Genomic	ENSMUSG00000056267.15	novel	NA	NA	NA	NA	16775	234	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGGGCAAACATTGAG	5593	False	NA	NA	False	ATTAAA	-23	NA	99145114	99145353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_99145100_99145400
ES.35924.53	chr9	+	5530	3	ISM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	50197	0	2151	0	intron_retention	FALSE	canonical	3	179	junction_1	23.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99175691	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_99178227_99178328_99178498_99179631
ES.35924.54	chr9	+	5728	1	FSM	ENSMUSG00000103857.2	ENSMUST00000195185.2	2869	1	-2860	1	-2860	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGTCAGAGTGAACACT	3145	False	NA	NA	False	AATAAA	-13	NA	99186775	99192503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99186800_99192500
ES.35924.6	chr9	+	1792	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	-24	0	-5	0	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTTGGTCATCAT	NA	False	NA	7	True	NA	NA	NA	99125489	99146981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ES.35924.7	chr9	+	3461	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-5	-3	intron_retention	TRUE	canonical	3	66	junction_1	85.5334136098285	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	False	NA	15	True	AATAAA	-20	NA	99125489	99182454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
ES.35924.8	chr9	+	2512	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	86.1095777193223	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCCTAGTGACTTAT	NA	False	NA	21	True	AATAAA	-26	NA	99125491	99182460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99125544_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ES.35924.9	chr9	+	3482	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_12	109.08785450269	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125491	99182457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160211_99163080_99163156_99171248_99171355_99173577_99173749_99178065_99178227_99178328_99178498_99179631_99180636_99181780
ES.35925.1	chr9	+	160	1	Intergenic	novelGene_29248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99222908	99223068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99222900_99223100
ES.35926.1	chr9	-	3792	1	Intergenic	novelGene_29244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATAGTGTCTTTTTCAA	6101	False	NA	NA	False	NA	NA	NA	99152351	99148559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99148600_99152400
ES.35927.1	chr9	-	173	1	Intergenic	novelGene_29245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATCTATATGAAG	1062	False	NA	NA	False	NA	NA	NA	99157390	99157217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99157200_99157400
ES.35928.1	chr9	-	256	1	Intergenic	novelGene_29246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTTTTAAATGACAAAAC	NA	False	NA	NA	False	NA	NA	NA	99165152	99164896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99164900_99165200
ES.35929.1	chr9	-	2434	1	Intergenic	novelGene_29247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAAAACAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	99177202	99174768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99174800_99177200
ES.3593.1	chr10	+	3626	14	NIC	ENSMUSG00000036168.16	novel	3656	16	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_7	1.73716766009788	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGCCTTCTAGATGT	NA	False	NA	NA	False	AATAAA	-14	NA	93385903	93420186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93386190_93391380_93391446_93398592_93398757_93399066_93399148_93401655_93401808_93403525_93403619_93405737_93405796_93406708_93406782_93409872_93410025_93411134_93411271_93414570_93414754_93415623_93415830_93417594_93417689_93418303
ES.35930.1	chr9	-	4582	23	FSM	ENSMUSG00000037681.14	ENSMUST00000042158.13	4483	23	-99	0	-60	0	multi-exon	TRUE	canonical	3	14	junction_20	5.80538365130531	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATATTTCTATT	NA	False	NA	1	True	AATAAA	-20	NA	99240670	99192015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
ES.35930.2	chr9	-	4805	22	NIC	ENSMUSG00000037681.14	novel	4483	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	14	junction_19	4.48428852075945	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATATTTCTATT	NA	False	NA	1	True	AATAAA	-20	NA	99240625	99192015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
ES.35930.5	chr9	-	4490	22	NNC	ENSMUSG00000037681.14	novel	4483	23	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	7.60087117575252	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTGTGTGTATATTTC	NA	False	NA	-3	True	AATAAA	-16	NA	99240639	99192019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206923_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
ES.35930.7	chr9	-	6360	20	NIC	ENSMUSG00000037681.14	novel	4483	23	NA	NA	-29	-4	intron_retention	FALSE	canonical	3	14	junction_17	4.38392935220185	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTGTGTGTATATTTC	NA	False	NA	-3	True	AATAAA	-16	NA	99240639	99192019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99207121_99209951_99210073_99211808_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
ES.35930.9	chr9	-	5915	22	NIC	ENSMUSG00000037681.14	novel	4483	23	NA	NA	-19	-6	intron_retention	FALSE	canonical	3	14	junction_19	5.81147508214442	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTTGTGTGTATATT	NA	False	NA	-5	True	AATAAA	-14	NA	99240629	99192021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99214936_99218117_99218253_99220820_99220863_99240103
ES.35931.1	chr9	+	5527	1	Antisense	novelGene_ENSMUSG00000032470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99302659	99308186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_99302700_99308200
ES.35932.1	chr9	+	1010	1	Antisense	novelGene_ENSMUSG00000032470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATGTAAATACTGTGA	NA	False	NA	NA	False	NA	NA	NA	99318749	99319759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_99318700_99319800
ES.35933.1	chr9	-	3954	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-251	1	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTATTTCCTCTTCC	2299	False	NA	-3	True	NA	NA	NA	99302456	99267471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
ES.35933.10	chr9	-	5241	5	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	228	-5	intron_retention	FALSE	canonical	3	447	junction_4	31.1558581971353	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATCCTGCCTTATTTCC	3922	False	NA	-9	True	NA	NA	NA	99318751	99267477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.12	chr9	-	1600	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-19	387	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACAGTGTCCCTGTTTG	2531	False	NA	NA	False	NA	NA	NA	99302224	99269593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
ES.35933.13	chr9	-	1920	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	658	2123	203	385	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACAGTGTCCCTGTT	3897	False	NA	NA	False	NA	NA	NA	99318776	99269595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.14	chr9	-	1708	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	489	2504	34	4	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTCTTCTTAACCGA	3728	False	NA	25	True	GATAAA	-14	NA	99318945	99269976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.15	chr9	-	1463	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-271	-2	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGCTGTTGTCTTCTT	2279	False	NA	19	True	GATAAA	-8	NA	99302476	99269982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
ES.35933.16	chr9	-	1146	6	FSM	ENSMUSG00000032470.18	ENSMUST00000119472.8	1190	6	61	-17	61	17	multi-exon	FALSE	canonical	3	31	junction_5	193.993195756965	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGGCAGACCTCTG	NA	False	NA	-13	True	ATTAAA	-32	NA	99307888	99270014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99307829
ES.35933.17	chr9	-	1227	6	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	965	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	206.357553774995	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCGAAGCCCCAAGTC	4659	False	NA	-28	True	ATTAAA	-17	NA	99318014	99270029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99317859
ES.35933.18	chr9	-	4403	5	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	419	2	intron_retention	FALSE	canonical	3	447	junction_4	34.5063399971657	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCGAAGCCCCAAGTC	4113	False	NA	-28	True	ATTAAA	-17	NA	99318560	99270029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.19	chr9	-	1198	6	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-2349	2	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_5	197.183569295213	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCGAAGCCCCAAGTC	201	False	NA	-28	True	ATTAAA	-17	NA	99304554	99270029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99304428
ES.35933.2	chr9	-	4082	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	619	0	164	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTATTTCCTCTTC	3858	False	NA	-4	True	NA	NA	NA	99318815	99267472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.20	chr9	-	1193	6	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	2059	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	206.357553774995	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCGAAGCCCCAAGTC	5753	False	NA	-28	True	ATTAAA	-17	NA	99316920	99270029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99316799
ES.35933.21	chr9	-	1620	6	FSM	ENSMUSG00000032470.18	ENSMUST00000122384.9	1167	6	-503	50	-48	1	multi-exon	FALSE	canonical	3	40	junction_5	190.404411713594	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGCGAAGCCCCAAGT	3191	False	NA	-29	True	ATTAAA	-16	NA	99319482	99270030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318933
ES.35933.22	chr9	-	1411	6	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	257	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	202.268534379423	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGCGAAGCCCCAAGT	3951	False	NA	-29	True	ATTAAA	-16	NA	99318722	99270030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271842_99274994_99275099_99276521_99276676_99293445_99293656_99318362
ES.35933.23	chr9	-	1409	7	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	409	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	239.211668240122	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTGGCGAAGCCCCAA	4103	False	NA	27	True	ATTAAA	-14	NA	99318570	99270032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99300389_99300522_99318362
ES.35933.24	chr9	-	1065	5	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	411	-1	combination_of_known_splicesites	FALSE	canonical	1	15	junction_4	214.024531304241	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTGGCGAAGCCCCAA	4105	False	NA	27	True	ATTAAA	-14	NA	99318568	99270032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99318362
ES.35933.25	chr9	-	1173	7	NNC	ENSMUSG00000032470.18	novel	1167	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	248.09166092842	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTGGCGAAGCCCCAA	3697	False	NA	27	True	ATTAAA	-14	NA	99318976	99270032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99291930_99291992_99293445_99293656_99318933
ES.35933.27	chr9	-	170	1	Intergenic	novelGene_29249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAACACACACAC	8961	False	NA	NA	False	NA	NA	NA	99295794	99295624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99295600_99295800
ES.35933.28	chr9	-	4416	1	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	474	-39036	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAAAAAATTT	4168	False	NA	NA	False	AATAAA	-15	NA	99318505	99314089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99314100_99318500
ES.35933.3	chr9	-	4154	7	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	221	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	239.211668240122	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	3915	False	NA	-7	True	NA	NA	NA	99318758	99267475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99300389_99300522_99318362
ES.35933.4	chr9	-	3799	5	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	234	-3	combination_of_known_splicesites	FALSE	canonical	1	15	junction_4	214.024531304241	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	3928	False	NA	-7	True	NA	NA	NA	99318745	99267475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99318362
ES.35933.5	chr9	-	4176	6	FSM	ENSMUSG00000032470.18	ENSMUST00000122384.9	1167	6	-504	-2505	-49	-3	multi-exon	FALSE	canonical	3	40	junction_5	190.404411713594	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	3190	False	NA	-7	True	NA	NA	NA	99319483	99267475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318933
ES.35933.6	chr9	-	3981	6	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-2578	-3	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_5	197.183569295213	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	NA	False	NA	-7	True	NA	NA	NA	99304783	99267475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99304428
ES.35933.7	chr9	-	3812	6	FSM	ENSMUSG00000032470.18	ENSMUST00000119472.8	1190	6	-66	-2556	-66	-3	multi-exon	FALSE	canonical	3	31	junction_5	193.993195756965	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCTGCCTTATTTCCTC	NA	False	NA	-7	True	NA	NA	NA	99308015	99267475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99307829
ES.35933.8	chr9	-	4005	7	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-176	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	242.932089275995	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATCCTGCCTTATTTCC	2374	False	NA	-9	True	NA	NA	NA	99302381	99267477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99300389_99300522_99302132
ES.35933.9	chr9	-	3148	7	NNC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	331	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.839217325216	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATCCTGCCTTATTTCC	4025	False	NA	-9	True	NA	NA	NA	99318648	99267477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99269092_99269853_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ES.35934.1	chr9	+	326	1	Intergenic	novelGene_29250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99325515	99325841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99325500_99325800
ES.35934.2	chr9	+	173	1	Intergenic	novelGene_29251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	99325517	99325690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99325500_99325700
ES.35935.1	chr9	+	155	1	Intergenic	novelGene_29253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	99441103	99441258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99441100_99441300
ES.35936.1	chr9	+	2092	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	-118	287	-118	-287	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTTTTAAGACATTCAC	6288	False	NA	20	True	ATTAAA	-24	NA	99457733	99466267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.10	chr9	+	2748	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	19	-506	-10	506	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTCTAGAAAGTCTGT	6425	False	NA	NA	False	AATAAA	-16	NA	99457870	99467060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.11	chr9	+	1996	7	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-9	-164	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	92.1188845399731	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATCCTATTGGCTC	6426	False	NA	NA	False	ATTAAA	-15	NA	99457871	99466390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99458754_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.12	chr9	+	5465	5	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-9	-47	intron_retention	FALSE	canonical	3	262	junction_1	4.9749371855331	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTAATTATTCAATGT	6426	False	NA	2	True	ATTAAA	-13	NA	99457871	99466507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.13	chr9	+	4659	6	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-9	-157	intron_retention	FALSE	canonical	3	258	junction_2	5.6	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTATTGGCTCTTGTATA	6426	False	NA	NA	False	ATTAAA	-22	NA	99457871	99466397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.14	chr9	+	6994	3	NNC	ENSMUSG00000032469.13	novel	491	5	NA	NA	-9	-296	intron_retention	FALSE	non_canonical	0	0	junction_2	131	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGATGACCATTTTTAA	6426	False	NA	11	True	ATTAAA	-15	NA	99457871	99466258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99458179_99458628_99461943_99462885
ES.35936.16	chr9	+	5034	5	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	19	-294	intron_retention	FALSE	canonical	2	18	junction_3	101.787462391004	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATGACCATTTTTAAGA	6454	False	NA	13	True	ATTAAA	-17	NA	99457899	99466260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99458754_99460493_99464156_99464443_99464516_99465364
ES.35936.17	chr9	+	2613	8	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	19	506	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	87.67449074007	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTCTAGAAAGTCTGT	6454	False	NA	NA	False	AATAAA	-16	NA	99457899	99467060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462297_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.2	chr9	+	2111	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	-5	155	-5	-155	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGGCTCTTGTATATT	6401	False	NA	NA	False	ATTAAA	-24	NA	99457846	99466399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.3	chr9	+	4797	6	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-4	-43	intron_retention	FALSE	canonical	3	258	junction_2	5.6	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTATTCAATGTTAAT	6402	False	NA	6	True	ATTAAA	-17	NA	99457847	99466511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.4	chr9	+	2820	6	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	9	-47	intron_retention	FALSE	canonical	3	18	junction_2	99.4995477376656	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTAATTATTCAATGT	6415	False	NA	2	True	ATTAAA	-13	NA	99457860	99466507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99458754_99461409_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.5	chr9	+	3979	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	9	-1727	9	1727	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGTGTAGCACATTTAAAG	6415	False	NA	NA	False	NA	NA	NA	99457860	99468281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.6	chr9	+	2207	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	13	41	13	-41	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATTCAATGTTAATTA	6419	False	NA	8	True	ATTAAA	-19	NA	99457864	99466513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.7	chr9	+	3826	7	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-11	-157	intron_retention	FALSE	canonical	3	227	junction_2	14.9861046751093	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTATTGGCTCTTGTATA	6424	False	NA	NA	False	ATTAAA	-22	NA	99457869	99466397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ES.35936.8	chr9	+	2817	7	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-10	-47	intron_retention	FALSE	canonical	2	18	junction_5	88.5004708085405	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTAATTATTCAATGT	6425	False	NA	2	True	ATTAAA	-13	NA	99457870	99466507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99462417_99464074_99464156_99464443_99464516_99465364
ES.35936.9	chr9	+	1969	8	NNC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	-10	-164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.4210107423793	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTATCCTATTGGCTC	6425	False	NA	NA	False	ATTAAA	-15	NA	99457870	99466390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462300_99462417_99464074_99464156_99464369_99464516_99465364
ES.35937.1	chr9	-	4667	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-21	1	-21	-1	multi-exon	TRUE	canonical	3	93	junction_7	54.8151294142266	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTTTCCAAGTGACT	NA	False	NA	5	True	AATAAA	-34	NA	99450973	99360425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.10	chr9	-	4302	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	4	-22	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	65.0465025962196	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCAACTTCTTTAAAG	NA	False	NA	-16	True	AATAAA	-13	NA	99450712	99360446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.11	chr9	-	4415	22	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	1	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	71.979872470131	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCAACTTCTTTAAAG	NA	False	NA	-16	True	AATAAA	-13	NA	99450715	99360446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411369_99411465_99415150_99415244_99417847_99417959_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.12	chr9	-	4520	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-1	128	-1	-128	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCATTTTTTTTCTT	NA	False	NA	-122	True	TATAAA	-24	NA	99450953	99360552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.13	chr9	-	4424	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	16	-130	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	65.4877660330538	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGTTGCATTTTTTTTC	NA	False	NA	-124	True	TATAAA	-22	NA	99450936	99360554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.14	chr9	-	4584	21	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	21	-131	intron_retention	FALSE	canonical	0	0	junction_2	65.2995214377563	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGTTGCATTTTTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	99450931	99360555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365239_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.16	chr9	-	4114	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	233	300	1	-300	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAGGTGCAGTATTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	99450719	99360724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.17	chr9	-	2997	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-7	1657	-7	-1657	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCTACAGTCTGCCTGA	NA	False	NA	65	True	NA	NA	NA	99450959	99362081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.18	chr9	-	2703	19	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	23	-1669	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	64.1013857441552	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGAAAAAGTTGGCTA	NA	False	NA	53	True	NA	NA	NA	99450929	99362093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.19	chr9	-	3057	21	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	1	-1669	intron_retention	FALSE	canonical	2	2	junction_17	64.6226740393803	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGAAAAAGTTGGCTA	NA	False	NA	53	True	NA	NA	NA	99450715	99362093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417959_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.2	chr9	-	4538	21	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-1	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.0129822097482	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAACTTCTTTAAAGGAG	NA	False	NA	-13	True	AATAAA	-16	NA	99450953	99360443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365239_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.20	chr9	-	2951	22	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-6842	-1721	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	66.1375944973484	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATAGATTTTCTTTAT	NA	False	NA	1	True	AGTAAA	-27	NA	99457794	99362145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99457471
ES.35937.21	chr9	-	3050	23	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-10	-1723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	73.5487694499596	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACATAGATTTTCTTT	NA	False	NA	-1	True	AGTAAA	-25	NA	99450962	99362147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99431721_99431838_99433595_99433673_99450654
ES.35937.22	chr9	-	2510	20	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-1	-1723	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.8247063552813	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACATAGATTTTCTTT	NA	False	NA	-1	True	AGTAAA	-25	NA	99450703	99362147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.23	chr9	-	2816	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	29	-1725	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	65.4877660330538	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTACATAGATTTTCT	NA	False	NA	-3	True	AGTAAA	-23	NA	99450923	99362149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.24	chr9	-	2587	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	6	-1731	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	64.5189119561079	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCTCAACTTACATAGA	NA	False	NA	-9	True	AGTAAA	-17	NA	99450710	99362155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.25	chr9	-	2889	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	-8	1766	-8	-1766	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATATTTGTAAGTAAAA	NA	False	NA	-44	True	CATAAA	-23	NA	99450960	99362190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.26	chr9	-	2272	18	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-1	-1820	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	77.0201968748691	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAAACAATTGTTTA	NA	False	NA	-98	True	AATGAA	-11	NA	99450721	99362244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99433595_99433673_99450654
ES.35937.27	chr9	-	7886	9	ISM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	56748	2096	56498	-2096	intron_retention	FALSE	canonical	3	93	junction_7	16.8407058937564	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCCTATGCTGCAGC	2326	False	NA	NA	False	NA	NA	NA	99394204	99362520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317
ES.35937.28	chr9	-	2056	19	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	5	-2098	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	64.1013857441552	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGCCTATGCTGCA	NA	False	NA	NA	False	NA	NA	NA	99450711	99362522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.29	chr9	-	3959	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-209	-930	41	930	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACTTAGAAGAACTCAGT	NA	False	NA	NA	False	AATAAA	-15	NA	99450911	99399926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.3	chr9	-	4439	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-13	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	66.8644898283087	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAACTTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-15	NA	99450965	99360444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.30	chr9	-	3714	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-333	-561	-83	561	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGTTTTCCTATTG	NA	False	NA	NA	False	TATAAA	-15	NA	99451035	99400295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.31	chr9	-	3165	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-10	-335	4	335	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTATGCCTTGTATAA	NA	False	NA	NA	False	NA	NA	NA	99450712	99400521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.32	chr9	-	3252	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-204	-228	46	228	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAACTCTTCCTTACAT	NA	False	NA	NA	False	TATAAA	-2	NA	99450906	99400628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.33	chr9	-	3087	12	NNC	ENSMUSG00000032468.12	novel	2820	12	NA	NA	-6836	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	68.1595115025369	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTTTATGTGTGTGA	NA	False	NA	-3	True	AATAAA	-26	NA	99457788	99400858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99457471
ES.35937.34	chr9	-	2952	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	-194	3	38	-3	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	-4	True	AATAAA	-25	NA	99450914	99400859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.35	chr9	-	3056	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-239	3	11	-3	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTTTTTATGTGTGTG	NA	False	NA	-4	True	AATAAA	-25	NA	99450941	99400859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.36	chr9	-	2596	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	9	156	5	-156	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATACCGTGTTCTAGAAG	NA	False	NA	NA	False	AATAAA	-30	NA	99450711	99401012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.37	chr9	-	2883	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-234	171	16	-171	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGACTTAATACATGAT	NA	False	NA	NA	False	AATAAA	-15	NA	99450936	99401027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.38	chr9	-	1885	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-234	1169	16	-1169	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTAGTGAGTGGTCATC	NA	False	NA	4	True	AATAAA	-23	NA	99450936	99402025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.39	chr9	-	1464	11	NIC	ENSMUSG00000032468.12	novel	2820	12	NA	NA	-1	-1174	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	72.1767968255727	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTTAGTGAGTGG	NA	False	NA	-1	True	AATAAA	-18	NA	99450721	99402030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99402636_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.40	chr9	-	1588	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	-1	1174	-1	-1174	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTTTAGTGAGTGG	NA	False	NA	-1	True	AATAAA	-18	NA	99450721	99402030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.41	chr9	-	8479	1	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	37991	-3376	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGGCAAGAATAAAACGA	7671	False	NA	NA	False	NA	NA	NA	99412711	99404232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99404200_99412700
ES.35937.42	chr9	-	179	1	Intergenic	novelGene_29252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACATATTGAAA	1471	False	NA	NA	False	NA	NA	NA	99436088	99435909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99435900_99436100
ES.35937.43	chr9	-	3944	2	Intergenic	novelGene_29254	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAACCCTGAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	99445814	99441553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99444607_99444923
ES.35937.5	chr9	-	4551	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-1	-20	combination_of_known_junctions	FALSE	canonical	3	18	junction_20	65.4877660330538	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAACTTCTTTAAAGGA	NA	False	NA	-14	True	AATAAA	-15	NA	99450953	99360444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ES.35937.6	chr9	-	4365	22	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-4	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	64.163941102994	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCAACTTCTTTAAAGG	NA	False	NA	-15	True	AATAAA	-14	NA	99450706	99360445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417931_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.7	chr9	-	4361	19	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	13	-21	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	64.1013857441552	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCAACTTCTTTAAAGG	NA	False	NA	-15	True	AATAAA	-14	NA	99450939	99360445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ES.35937.8	chr9	-	4488	23	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	3	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	73.5487694499596	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCAACTTCTTTAAAG	NA	False	NA	-16	True	AATAAA	-13	NA	99450699	99360446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99431721_99431838_99433595_99433673_99450654
ES.35937.9	chr9	-	4672	22	NNC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	-6864	-22	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	66.1375944973484	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGCAACTTCTTTAAAG	NA	False	NA	-16	True	AATAAA	-13	NA	99457816	99360446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99457471
ES.35938.1	chr9	+	177	1	Intergenic	novelGene_29255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATGTCCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	99468849	99469026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99468800_99469000
ES.35939.1	chr9	-	170	1	Intergenic	novelGene_29256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTTGTCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	99474495	99474325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99474300_99474500
ES.3594.1	chr10	-	161	1	Intergenic	novelGene_2747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93408417	93408256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93408300_93408400
ES.35940.1	chr9	-	177	1	Intergenic	novelGene_29257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACTAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99476374	99476197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99476200_99476400
ES.35941.1	chr9	-	158	1	Intergenic	novelGene_29258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9241	False	NA	NA	False	NA	NA	NA	99490257	99490099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99490100_99490300
ES.35942.1	chr9	+	4001	16	NIC	ENSMUSG00000037784.15	novel	3981	16	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	5.64348198268488	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	AATATA	-20	NA	99511570	99551308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99511723_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.11	chr9	+	3988	16	FSM	ENSMUSG00000037784.15	ENSMUST00000112886.9	3970	16	-24	6	-24	-6	multi-exon	FALSE	canonical	0	0	junction_1	6.07142670401465	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTATGTCGTTCTTT	NA	False	NA	NA	False	AATATA	-15	NA	99511871	99551303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99512016_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.12	chr9	+	3714	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-11	-286	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	5.64579489531811	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAAGCCTCTTGTCCC	NA	False	NA	NA	False	AATAAA	-11	NA	99511884	99550930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99512016_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.15	chr9	+	6604	8	NIC	ENSMUSG00000037784.15	novel	3981	16	NA	NA	-651	-1	intron_retention	FALSE	canonical	3	10	junction_6	4.71212071499161	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	AATATA	-20	NA	99531617	99551308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99545211_99545578_99547908_99549691
ES.35942.16	chr9	+	3515	5	NIC	ENSMUSG00000037784.15	novel	3970	16	NA	NA	9536	-2	intron_retention	FALSE	canonical	3	15	junction_4	3.35410196624968	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTCGTTCTTTGTTA	NA	False	NA	NA	False	AATATA	-19	NA	99541804	99551307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.2	chr9	+	1945	12	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-21	6271	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	6.01925285718067	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGACGTGATTTACTGTT	NA	False	NA	NA	False	NA	NA	NA	99511573	99542009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685
ES.35942.3	chr9	+	4113	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-21	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.75407464324195	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	AATATA	-20	NA	99511573	99551308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ES.35942.4	chr9	+	4922	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-20	812	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGCTCGTGTTTGTCACA	NA	False	NA	NA	False	AATAGA	-35	NA	99511574	99552121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.5	chr9	+	4028	17	NNC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	8.25733575374043	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	False	NA	NA	False	AATATA	-20	NA	99511575	99551308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532962_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99545077_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.6	chr9	+	3773	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	-16	-240	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTTTCTGAATGAGAT	NA	False	NA	NA	False	CATAAA	-12	NA	99511578	99550976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ES.35942.8	chr9	+	4862	16	NNC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	2	-278	intron_retention	FALSE	canonical	0	0	junction_1	6.65532368358845	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTTGTCCCCAATAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	99511596	99550938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_99511723_99514693_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ES.35942.9	chr9	+	4352	17	FSM	ENSMUSG00000037784.15	ENSMUST00000112885.9	4350	17	-4	2	-4	-2	multi-exon	FALSE	canonical	1	2	junction_1	6.09302880347697	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTCGTTCTTTGTTA	NA	False	NA	NA	False	AATATA	-19	NA	99511626	99551307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_99512016_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ES.35943.1	chr9	+	192	1	Intergenic	novelGene_29259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGACTCCTTGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	99569341	99569533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99569300_99569500
ES.35944.1	chr9	+	239	1	Intergenic	novelGene_29260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATCAGGAAAAAAAG	624	False	NA	NA	False	AAGAAA	-11	NA	99576426	99576665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_99576400_99576700
ES.35945.1	chr9	+	1118	2	Antisense	novelGene_ENSMUSG00000032473.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATTCCTGTTGAGACT	1499	False	NA	NA	False	ATTAAA	-14	NA	99577301	99581837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_99577424_99580841
ES.35945.2	chr9	+	4529	1	Antisense	novelGene_ENSMUSG00000032473.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGTTGAGACTCTTAA	1511	False	NA	NA	False	ATTAAA	-19	NA	99577313	99581842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_99577300_99581800
ES.35946.1	chr9	-	178	1	Intergenic	novelGene_29261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAACAGAAATATC	NA	False	NA	NA	False	NA	NA	NA	99658258	99658080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99658100_99658300
ES.35947.1	chr9	-	179	1	Intergenic	novelGene_29262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	99765262	99765083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_99765100_99765300
ES.35948.1	chr9	-	1495	5	NNC	ENSMUSG00000111258.2	novel	708	5	NA	NA	-442	339	intron_retention	FALSE	canonical	1	1	junction_1	0.866025403784439	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATTCATTTTACATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	100274402	100265915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100266938_100271146_100271246_100271506_100271577_100273786_100274016_100274327
ES.35949.1	chr9	+	1599	1	Genic_Genomic	ENSMUSG00000101287.2	novel	NA	NA	NA	NA	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGCACTCCCCACTT	NA	False	NA	NA	False	NA	NA	NA	100332366	100333965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_100332400_100334000
ES.3595.1	chr10	-	491	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	10	360	10	-360	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGGACTATTTAATGC	NA	False	NA	-1	True	AATAAA	-28	NA	93425558	93419250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ES.3595.2	chr10	-	4349	3	NIC	ENSMUSG00000020018.7	novel	861	4	NA	NA	49	-366	intron_retention	FALSE	canonical	3	2132	junction_2	49.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGACTTGTGGACTATT	NA	False	NA	-7	True	AATAAA	-22	NA	93425519	93419256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93419393_93419891_93423986_93425400
ES.3595.4	chr10	-	455	4	NNC	ENSMUSG00000020018.7	novel	861	4	NA	NA	279	-367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1145.16151214092	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTGACTTGTGGACTAT	NA	False	NA	-8	True	AATAAA	-21	NA	93425289	93419257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93419393_93419891_93419957_93423859_93423986_93425160
ES.35950.1	chr9	-	1185	1	Intergenic	novelGene_29263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGTCATGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	100339676	100338491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100338500_100339700
ES.35951.1	chr9	+	4781	2	Antisense	novelGene_ENSMUSG00000032475.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCATGACCACACCTAG	NA	False	NA	NA	False	AAAAAG	-9	NA	100382278	100387254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_100385458_100385652
ES.35952.1	chr9	+	130	1	Intergenic	novelGene_29264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	100390250	100390380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100390200_100390400
ES.35953.1	chr9	-	3791	3	FSM	ENSMUSG00000044244.19	ENSMUST00000136606.8	2327	3	-1461	-3	-1461	1	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTCTGTTACAGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	100350389	100339770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100341295_100343442_100343586_100348265
ES.35953.10	chr9	-	1422	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	17	3037	5	-327	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGCCCATACGTATATA	NA	False	NA	NA	False	AATACA	-18	NA	100428170	100377382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ES.35953.2	chr9	-	3481	10	Fusion	ENSMUSG00000032475.16_ENSMUSG00000044244.19	novel	2793	7	NA	NA	13	0	multi-exon	FALSE	canonical	0	0	junction_2	59.5889210019181	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCCTCTGTTACAGT	NA	False	NA	NA	False	AATAAA	-11	NA	100428162	100339773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_100341295_100343442_100343586_100348265_100348417_100350375_100350501_100355050_100355242_100356928_100357056_100377573_100377725_100379310_100380024_100390481_100390726_100428047
ES.35953.3	chr9	-	3198	1	ISM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	50641	3	11363	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAATTTATAGCCATAT	NA	False	NA	NA	False	AATAAA	-20	NA	100377546	100374348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_100374300_100377500
ES.35953.4	chr9	-	2908	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	19	1549	7	1161	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACTGTGACTGGTTTC	NA	False	NA	NA	False	AGTAAA	-30	NA	100428168	100375894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ES.35953.5	chr9	-	2926	5	NNC	ENSMUSG00000032475.16	novel	4476	4	NA	NA	1	1007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.6435385565573	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTTTGAAAGCTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	100428186	100376048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100377725_100379310_100380024_100388778_100388933_100390481_100390726_100428047
ES.35953.6	chr9	-	4301	3	NIC	ENSMUSG00000032475.16	novel	4476	4	NA	NA	35	996	intron_retention	FALSE	canonical	3	120	junction_1	7.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTATAACACCTGCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	100428140	100376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_100380024_100390481_100390726_100428047
ES.35953.7	chr9	-	2729	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	26	1721	14	989	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCAATCTTTATAACA	NA	False	NA	NA	False	ATTAAA	-12	NA	100428161	100376066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ES.35953.8	chr9	-	1809	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	-20	2687	-20	23	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCATTGTAAATATCAAG	NA	False	NA	-17	True	AATAAA	-41	NA	100428207	100377032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ES.35953.9	chr9	-	1461	3	NIC	ENSMUSG00000032475.16	novel	4476	4	NA	NA	23	-26	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	61.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAACAGAAAATAAG	NA	False	NA	-66	True	GATAAA	-44	NA	100428152	100377081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_100377725_100379310_100380024_100428047
ES.35954.1	chr9	-	1571	2	FSM	ENSMUSG00000070287.4	ENSMUST00000093792.4	1590	2	14	5	14	-3	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTCATGATCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	100453129	100434245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100435688_100453000
ES.35954.2	chr9	-	1536	2	FSM	ENSMUSG00000070287.4	ENSMUST00000093792.4	1590	2	-121	175	-121	-173	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTGTTAATGTCTA	NA	False	NA	NA	False	ATTAAA	-19	NA	100453264	100434415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100435688_100453000
ES.35955.1	chr9	+	3799	3	Intergenic	novelGene_29266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAGGCCAATCTGAG	NA	False	NA	NA	False	NA	NA	NA	100462696	100479225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100462872_100475337_100475391_100475654
ES.35956.1	chr9	-	4046	2	Intergenic	novelGene_29265	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGCTTTGATCATGGT	1719	False	NA	NA	False	NA	NA	NA	100465169	100459386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100463402_100465138
ES.35957.1	chr9	+	4825	32	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-117	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	117.029937381408	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100479733	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100658808_100658886_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.10	chr9	+	4551	34	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-62	57	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	96.3881139104504	744	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTTTATGAAAATCAGCA	NA	False	NA	0	True	AATAAA	-14	NA	100479788	100838944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737855_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.100	chr9	+	6040	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	77.2143927166943	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100525671	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716443_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.101	chr9	+	5919	33	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_22	78.8701216795689	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100525672	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.102	chr9	+	5702	31	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	6	-7	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	104.862894613236	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCTTGTGGTTAT	NA	False	NA	7	True	AATAAA	-7	NA	100525674	100840590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100620030_100620196_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.103	chr9	+	4383	30	NIC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	108.584219383701	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525677	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100620030_100620196_100639742_100639840_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.104	chr9	+	7099	33	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-5	0	intron_retention	FALSE	canonical	3	316	junction_9	35.5174775418737	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525683	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.105	chr9	+	6060	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.72092763246	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525695	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100580812_100580960_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.106	chr9	+	4359	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-27	195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	78.432930060698	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGTTCTAATCGCCGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	100525793	100839082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771631_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.108	chr9	+	5778	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	78.7500841750392	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTTATCCTGTTGC	NA	False	NA	15	True	AATAAA	-15	NA	100525815	100840598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833749_100835545_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.109	chr9	+	5548	1	Intergenic	novelGene_29267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAGATCTCTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	100529374	100534922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100529400_100534900
ES.35957.11	chr9	+	5976	34	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.7058314050068	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100479979	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100480121_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.110	chr9	+	2157	1	Intergenic	novelGene_29268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100531112	100533269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100531100_100533300
ES.35957.111	chr9	+	188	1	Intergenic	novelGene_29269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGTACATTACTGTTA	NA	False	NA	NA	False	NA	NA	NA	100580812	100581000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100580800_100581000
ES.35957.112	chr9	+	3166	1	Intergenic	novelGene_29270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100582037	100585203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100582000_100585200
ES.35957.113	chr9	+	3648	1	FSM	ENSMUSG00000104272.2	ENSMUST00000195122.2	1057	1	-2566	-25	-2566	25	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTCTTTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	100582699	100586347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100582700_100586300
ES.35957.117	chr9	+	5498	31	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-58614	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	81.0023387865368	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCTTGTGGTTAT	NA	False	NA	7	True	AATAAA	-7	NA	100620142	100840590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813785_100824709_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.118	chr9	+	3987	1	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-40396	-16501	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATATTTTTACTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	100638360	100642347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100638400_100642300
ES.35957.119	chr9	+	192	1	Intergenic	novelGene_29271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	579	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGAAGAAACAGATTTAAA	2962	False	NA	NA	False	NA	NA	NA	100652189	100652381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100652200_100652400
ES.35957.12	chr9	+	5915	33	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	140	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_22	97.4543963862072	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100479990	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.120	chr9	+	5084	27	ISM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	153255	5	-1	-4	3prime_fragment	FALSE	canonical	3	316	junction_2	35.7795063817694	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCCTTGTGGTTATCCT	NA	False	NA	10	True	AATAAA	-10	NA	100678755	100840593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.121	chr9	+	4521	3	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	6581	-19288	intron_retention	FALSE	canonical	0	0	junction_1	223.5	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100685337	100814445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100685408_100790689_100790771_100810075
ES.35957.122	chr9	+	4735	24	ISM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	201567	4	-35	-3	3prime_fragment	FALSE	canonical	3	363	junction_8	30.0069935137686	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	7664	False	NA	11	True	AATAAA	-11	NA	100727067	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.123	chr9	+	3415	22	ISM	ENSMUSG00000037286.16	ENSMUST00000123302.8	4800	35	212024	10	7631	-3	3prime_fragment	FALSE	canonical	3	363	junction_6	31.0352736191705	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAATGGTTCTCAA	NA	False	NA	-3	True	AATAAA	-12	NA	100737844	100839449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.124	chr9	+	4556	22	ISM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	212344	8	7631	-7	3prime_fragment	FALSE	canonical	3	363	junction_6	31.0352736191705	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCTTGTGGTTAT	NA	False	NA	7	True	AATAAA	-7	NA	100737844	100840590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.125	chr9	+	4057	1	Intergenic	novelGene_29274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100752948	100757005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100752900_100757000
ES.35957.126	chr9	+	3929	16	ISM	ENSMUSG00000037286.16	ENSMUST00000146934.8	2885	23	43194	-1707	-1364	-3	3prime_fragment	FALSE	canonical	3	390	junction_5	25.0238996872101	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	11	True	AATAAA	-11	NA	100770296	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.127	chr9	+	2137	1	Intergenic	novelGene_29275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCTATAGGACATGACT	NA	False	NA	NA	False	NA	NA	NA	100777482	100779619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100777500_100779600
ES.35957.128	chr9	+	1391	1	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	-24552	-19073	mono-exon	FALSE	NA	NA	NA	NA	NA	626	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	5966	False	NA	NA	False	NA	NA	NA	100813269	100814660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100813300_100814700
ES.35957.129	chr9	+	172	1	Intergenic	novelGene_29276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	654	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGAAGCAGT	NA	False	NA	NA	False	NA	NA	NA	100829543	100829715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100829500_100829700
ES.35957.13	chr9	+	5851	33	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	156	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	117.161609640008	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTTATCCTGTTGC	NA	False	NA	15	True	AATAAA	-15	NA	100480006	100840598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620061_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ES.35957.130	chr9	+	6948	2	NIC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	-7343	0	intron_retention	FALSE	canonical	3	447	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100830478	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100836389_100838421
ES.35957.131	chr9	+	4722	5	ISM	ENSMUSG00000037286.16	ENSMUST00000146934.8	2885	23	104320	-1703	-6399	-7	3prime_fragment	FALSE	canonical	3	400	junction_1	24.2538656712698	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCTTGTGGTTAT	NA	False	NA	7	True	AATAAA	-7	NA	100831422	100840590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.132	chr9	+	6140	2	ISM	ENSMUSG00000037286.16	ENSMUST00000146934.8	2885	23	105648	-1707	-5071	-3	intron_retention	FALSE	canonical	3	400	junction_1	0	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	11	True	AATAAA	-11	NA	100832750	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100833835_100835538
ES.35957.133	chr9	+	3137	4	ISM	ENSMUSG00000037286.16	ENSMUST00000155108.8	1793	9	307885	0	-4248	0	3prime_fragment	FALSE	canonical	3	420	junction_1	17.7451088722749	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGGTTCTCAAGTT	NA	False	NA	0	True	AATAAA	-15	NA	100833573	100839452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.134	chr9	+	2312	1	FSM	ENSMUSG00000037286.16	ENSMUST00000191345.2	3607	1	1860	-565	1860	565	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100839681	100841993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100839700_100842000
ES.35957.14	chr9	+	5873	33	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	161	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_30	95.8879910934498	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	11	True	AATAAA	-11	NA	100480011	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ES.35957.15	chr9	+	6048	35	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	161	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.700630719451	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100480011	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100480163_100531606_100531668_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.16	chr9	+	5884	33	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	161	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.8500486752356	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100480011	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.17	chr9	+	3907	30	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	167	103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	83.3329068558251	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCTGTTGTACAATT	NA	False	NA	46	True	AGTAAA	-18	NA	100480017	100838990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.18	chr9	+	5773	32	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	169	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	80.8154846538305	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100480019	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.19	chr9	+	8432	31	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	169	0	intron_retention	FALSE	canonical	3	68	junction_1	70.8566314625683	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100480019	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100828038_100829134_100829341_100833659_100833835_100835538_100836389_100838421_100838503_100838587
ES.35957.2	chr9	+	4613	35	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-113	204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5615392585695	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGCCGAAGAGTGTTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100479737	100839091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100479826_100479967_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.20	chr9	+	6122	35	Fusion	ENSMUSG00000103657.2_ENSMUSG00000037286.16	novel	3857	26	NA	NA	171	-7	multi-exon	FALSE	canonical	0	0	junction_1	102.700630719451	758	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCTTGTGGTTAT	NA	False	NA	7	True	AATAAA	-7	NA	100480021	100840590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_100480163_100551353_100551506_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.21	chr9	+	4248	3	ISM	ENSMUSG00000037286.16	ENSMUST00000124487.8	536	4	185	21540	185	3747	5prime_fragment	FALSE	canonical	3	68	junction_1	175	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100480035	100598509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_100480163_100587205_100587308_100594490
ES.35957.22	chr9	+	5708	33	NNC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	221	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	138.061237403688	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	11	True	AATAAA	-11	NA	100480071	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100480163_100545302_100545352_100587205_100587308_100594490_100594594_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810078_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
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ES.35957.87	chr9	+	5974	35	NNC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	77.5835357360119	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525669	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587_100840229_100840270
ES.35957.88	chr9	+	5996	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	77.7737057834765	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTTATCCTGTTGC	NA	False	NA	15	True	AATAAA	-15	NA	100525669	100840598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762926_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.9	chr9	+	5016	34	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	118.415720359599	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100479782	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100480163_100545302_100545352_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ES.35957.90	chr9	+	5739	32	NIC	ENSMUSG00000037286.16	novel	5909	33	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	104.45612574682	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100525669	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ES.35957.91	chr9	+	4800	33	NNC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	102.545412005791	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525669	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100658808_100658886_100668525_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.92	chr9	+	4865	34	NNC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	78.7484516733822	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525669	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828036_100829145_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.93	chr9	+	5502	33	NIC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	1	0	intron_retention	FALSE	canonical	3	316	junction_9	35.5853809300603	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525669	100839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100836389_100838421_100838503_100838587
ES.35957.95	chr9	+	5971	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	78.7169144280941	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525669	100840597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773146_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.96	chr9	+	6005	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.232557672598	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGGTTATCCTGTT	NA	False	NA	13	True	AATAAA	-13	NA	100525670	100840596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525852_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813650_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ES.35957.97	chr9	+	5900	33	FSM	ENSMUSG00000037286.16	ENSMUST00000041418.13	5909	33	5	4	2	-4	multi-exon	FALSE	canonical	3	20	junction_30	76.7811355310502	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCCTTGTGGTTATCCT	NA	False	NA	10	True	AATAAA	-10	NA	100525670	100840593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ES.35957.98	chr9	+	5764	34	NNC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	104.066518248597	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTGTGGTTATCCTG	NA	False	NA	11	True	AATAAA	-11	NA	100525670	100840594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587_100840229_100840270
ES.35958.1	chr9	-	3590	1	Intergenic	novelGene_29272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCTCACGAGAAGTTAC	NA	False	NA	NA	False	NA	NA	NA	100690811	100687221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100687200_100690800
ES.35958.2	chr9	-	1477	1	Intergenic	novelGene_29273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAATGGAAGTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	100690811	100689334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100689300_100690800
ES.35959.1	chr9	-	2948	1	Antisense	novelGene_ENSMUSG00000037286.16_AS_novelGene_ENSMUSG00000103624.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTGTTTTTAATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	100763505	100760557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_100760600_100763500
ES.3596.1	chr10	-	204	1	Intergenic	novelGene_2748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTCCACAACAAAATTT	NA	False	NA	NA	False	NA	NA	NA	93465392	93465188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93465200_93465400
ES.35960.1	chr9	-	2820	5	Antisense	novelGene_ENSMUSG00000037286.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	3.90512483795333	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGAAATTGTATTTAGT	NA	False	NA	NA	False	AATAAA	-30	NA	100851618	100826778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_100829230_100838081_100838193_100842389_100842496_100843014_100843098_100851549
ES.35960.2	chr9	-	724	6	Antisense	novelGene_ENSMUSG00000037286.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.66606055596467	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTAAAAATAAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	100851608	100826815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_100827008_100829050_100829254_100838081_100838193_100842389_100842496_100843162_100843212_100851545
ES.35960.3	chr9	-	175	1	Intergenic	novelGene_29277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATCAGATTTGGC	NA	False	NA	NA	False	NA	NA	NA	100830411	100830236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100830200_100830400
ES.35960.4	chr9	-	4564	1	Antisense	novelGene_ENSMUSG00000037286.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATGGTGTCTTCAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	100840944	100836380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_100836400_100840900
ES.35960.5	chr9	-	1496	5	Antisense	novelGene_ENSMUSG00000037286.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.76662979332984	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACCATGGTGTCTTCAA	NA	False	NA	NA	False	AGTAAA	-15	NA	100851618	100836382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_100837506_100838081_100838193_100842389_100842496_100843014_100843098_100851545
ES.35961.1	chr9	+	121	1	Intergenic	novelGene_29278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATTTGTAAAACA	NA	False	NA	NA	False	NA	NA	NA	100866201	100866322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100866200_100866300
ES.35962.1	chr9	+	1912	2	Antisense	novelGene_ENSMUSG00000032527.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCATAAACACTTTCAGG	NA	False	NA	NA	False	NA	NA	NA	100913892	100916299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_100914708_100915202
ES.35963.1	chr9	-	2364	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	-45	1	-45	-1	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGTGTTGTTTTTTTA	NA	False	NA	-1	True	NA	NA	NA	100916996	100864085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ES.35963.2	chr9	-	1805	10	NNC	ENSMUSG00000032527.14	novel	2188	14	NA	NA	-22821	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.9157842446432	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTGGGTGTTGTTT	NA	False	NA	-6	True	NA	NA	NA	100890483	100864090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100890291
ES.35963.4	chr9	-	2594	14	NIC	ENSMUSG00000032527.14	novel	2320	15	NA	NA	0	-9	intron_retention	FALSE	canonical	3	67	junction_11	13.0764705804065	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACATACTTGGGTGTTG	NA	False	NA	-9	True	NA	NA	NA	100916930	100864093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_100864860_100866425_100866526_100867180_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ES.35963.5	chr9	-	1868	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	1	451	1	-451	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTCAATCTTATACA	NA	False	NA	NA	False	AATAAA	-18	NA	100916950	100864535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ES.35964.1	chr9	-	173	1	Intergenic	novelGene_29279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAAATGAGCCGG	NA	False	NA	NA	False	NA	NA	NA	100929544	100929371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100929400_100929500
ES.35965.1	chr9	+	158	1	Intergenic	novelGene_29280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	100930769	100930927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100930800_100930900
ES.35966.1	chr9	-	182	1	Intergenic	novelGene_29281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	100950766	100950584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_100950600_100950800
ES.35967.1	chr9	+	3632	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-732	1989	-71	1026	multi-exon	FALSE	canonical	3	56	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGCTGTTTATGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100956082	100980010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100977769
ES.35967.10	chr9	+	5403	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-42	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTAGAATTTTTTTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	100956111	100981997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956558_100957474_100977769
ES.35967.11	chr9	+	5116	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	-37	-403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.05480466765633	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTAGAATACTGAGGA	NA	False	NA	19	True	AATAAA	-19	NA	100956116	100981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956557_100957474_100957932_100958051_100977769
ES.35967.12	chr9	+	3441	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-35	1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGCTGTTTATGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100956118	100980010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956399_100956553_100957474_100977769
ES.35967.13	chr9	+	5022	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-35	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATGTTGTAGAATACT	NA	False	NA	14	True	AATAAA	-14	NA	100956118	100981591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956399_100956553_100957474_100977769
ES.35967.14	chr9	+	4556	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	-34	-919	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	1.24721912892465	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTCTTAGTTGTCT	NA	False	NA	7	True	AGTAAA	-7	NA	100956119	100981080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956557_100957474_100957932_100958010_100977769
ES.35967.17	chr9	+	4477	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-30	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTTGTCTTGTCTTT	NA	False	NA	14	True	AGTAAA	-14	NA	100956123	100981087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956365_100956555_100957474_100977769
ES.35967.18	chr9	+	3586	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-30	1169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAACTGAATTTATATA	NA	False	NA	NA	False	AATAAA	-22	NA	100956123	100980153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956394_100956541_100957474_100977769
ES.35967.19	chr9	+	4998	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-30	-404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTGTAGAATACTGAGG	NA	False	NA	18	True	AATAAA	-18	NA	100956123	100981595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956371_100956548_100957474_100977769
ES.35967.2	chr9	+	4526	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-67	-909	at_least_one_novel_splicesite	FALSE	non_canonical	1	8	junction_1	24	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTCTTGTCTTTATT	NA	False	NA	17	True	AGTAAA	-17	NA	100956086	100981090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956374_100956555_100957474_100977769
ES.35967.20	chr9	+	3664	3	FSM	ENSMUSG00000066415.5	ENSMUST00000189616.2	2612	3	-29	-1023	-29	1023	multi-exon	FALSE	canonical	2	3	junction_1	1.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTAAGCTGTTTATGC	NA	False	NA	NA	False	AATAAA	-15	NA	100956124	100980007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100957932_100958010_100977769
ES.35967.21	chr9	+	3544	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-29	1169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAACTGAATTTATATA	NA	False	NA	NA	False	AATAAA	-22	NA	100956124	100980153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956560_100957474_100977769
ES.35967.22	chr9	+	3301	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-28	1021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTAAGCTGTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	100956125	100980005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956321_100956603_100957474_100977769
ES.35967.23	chr9	+	5284	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	-28	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.44948974278318	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATTTAAATTGGTATAT	NA	False	NA	NA	False	ACTAAA	-10	NA	100956125	100981813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956556_100957474_100957932_100958010_100977769
ES.35967.24	chr9	+	4514	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-28	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTTGTCTTGTCTTT	NA	False	NA	14	True	AGTAAA	-14	NA	100956125	100981087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956402_100956553_100957474_100977769
ES.35967.26	chr9	+	5137	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-26	-257	at_least_one_novel_splicesite	FALSE	non_canonical	1	8	junction_1	24	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAGCTGTGAATTTAT	NA	False	NA	NA	False	AAAAAG	-14	NA	100956127	100981742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956374_100956555_100957474_100977769
ES.35967.27	chr9	+	5572	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-686	3	-25	-3	multi-exon	FALSE	canonical	3	56	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTAGAATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	100956128	100981996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100977769
ES.35967.28	chr9	+	4592	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	-25	-919	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.29983164553722	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTCTTAGTTGTCT	NA	False	NA	7	True	AGTAAA	-7	NA	100956128	100981080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956374_100956555_100957474_100957932_100958051_100977769
ES.35967.3	chr9	+	5034	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-63	-394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGAGGAGTTTGGGAT	NA	False	NA	28	True	AATAAA	-28	NA	100956090	100981605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956556_100957474_100977769
ES.35967.32	chr9	+	5489	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.44948974278318	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTAGAATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	100956136	100981996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956402_100956553_100957474_100957932_100958010_100977769
ES.35967.33	chr9	+	4751	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-14	-403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTAGAATACTGAGGA	NA	False	NA	19	True	AATAAA	-19	NA	100956139	100981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956290_100956699_100957474_100977769
ES.35967.35	chr9	+	5011	4	NNC	ENSMUSG00000066415.5	novel	2612	3	NA	NA	28	-406	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_2	2.05480466765633	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGTTGTAGAATACTGA	NA	False	NA	16	True	AATAAA	-16	NA	100956181	100981593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956374_100956555_100957474_100957932_100958010_100977769
ES.35967.37	chr9	+	5067	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-581	403	80	-403	multi-exon	FALSE	canonical	3	56	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTAGAATACTGAGGA	NA	False	NA	19	True	AATAAA	-19	NA	100956233	100981596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100977769
ES.35967.39	chr9	+	4305	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	149	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTTGTCTTGTCTTT	NA	False	NA	14	True	AGTAAA	-14	NA	100956302	100981087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956363_100956546_100957474_100977769
ES.35967.42	chr9	+	3215	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	190	1021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTAAGCTGTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	100956343	100980005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956391_100956541_100957474_100977769
ES.35967.43	chr9	+	4343	3	FSM	ENSMUSG00000066415.5	ENSMUST00000189616.2	2612	3	372	-2103	-289	-912	multi-exon	FALSE	canonical	2	3	junction_1	1.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTTGTCTTGTCTTT	NA	False	NA	14	True	AGTAAA	-14	NA	100956525	100981087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100957932_100958010_100977769
ES.35967.44	chr9	+	3589	2	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	382	-911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGTTGTCTTGTCTTTA	NA	False	NA	15	True	AGTAAA	-15	NA	100957196	100981088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100957467_100977769
ES.35967.45	chr9	+	177	1	Intergenic	novelGene_29282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	100972156	100972333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_100972200_100972300
ES.35967.46	chr9	+	8042	1	Genic_Genomic	ENSMUSG00000066415.5	novel	NA	NA	NA	NA	24283	7140	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCTACTAAGTAGCCATG	NA	False	NA	NA	False	NA	NA	NA	100981097	100989139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_100981100_100989100
ES.35967.5	chr9	+	4691	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	-713	911	-52	-911	multi-exon	FALSE	canonical	3	56	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTAGTTGTCTTGTCTTTA	NA	False	NA	15	True	AGTAAA	-15	NA	100956101	100981088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_100957474_100977769
ES.35967.6	chr9	+	3402	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-50	1026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGCTGTTTATGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100956103	100980010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956345_100956553_100957474_100977769
ES.35967.7	chr9	+	3428	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-50	1029	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	25.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGTTTATGCTTTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	100956103	100980013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956372_100956557_100957474_100977769
ES.35967.9	chr9	+	4529	3	NNC	ENSMUSG00000066415.5	novel	4889	2	NA	NA	-42	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTTGTCTTGTCTTT	NA	False	NA	14	True	AGTAAA	-14	NA	100956111	100981087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_100956391_100956541_100957474_100977769
ES.35968.1	chr9	+	900	1	Intergenic	novelGene_29284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCCAGTGAGAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	101120053	101120953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_101120100_101121000
ES.35969.1	chr9	-	8813	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	48	-2075	48	2075	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTATATTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	101128946	100980207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.10	chr9	-	4916	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-25	1895	-25	904	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGTTCCTTACTTCC	NA	False	NA	NA	False	AGTAAA	-12	NA	101129019	100984177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.11	chr9	-	4762	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-56	2080	-56	719	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAACATTTGCAGATAA	NA	False	NA	NA	False	AATGAA	-22	NA	101129050	100984362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.12	chr9	-	4047	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-60	2799	-60	0	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGTGGAAAGCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	101129054	100985081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.13	chr9	-	4266	14	NNC	ENSMUSG00000043154.16	novel	2333	12	NA	NA	-37	7182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.6997760303939	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCATTTTTTTCTTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	101129031	100994261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100994591_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.14	chr9	-	5569	14	NNC	ENSMUSG00000043154.16	novel	2333	12	NA	NA	-49	957	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.4649315764322	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTAGCTTTGTTTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	101129043	101000486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_101002107_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.15	chr9	-	5663	13	ISM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-28	18204	-28	957	5prime_fragment	FALSE	canonical	3	27	junction_1	5.20416499866533	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTAGCTTTGTTTCTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	101129022	101000486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.16	chr9	-	2178	12	NIC	ENSMUSG00000043154.16	novel	6786	14	NA	NA	-36	-104	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	10.8315425517138	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCTCATTGATGCTAT	NA	False	NA	NA	False	NA	NA	NA	101129030	101001547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101128860
ES.35969.17	chr9	-	3168	1	Intergenic	novelGene_29283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	101021306	101018138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_101018100_101021300
ES.35969.18	chr9	-	221	2	ISM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-46	108438	-46	-7329	5prime_fragment	FALSE	canonical	3	31	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCACTTAAGGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	101129040	101090720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_101090762_101128860
ES.35969.2	chr9	-	7359	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-33	-540	-33	540	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAACATTACTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	101129027	100981742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.3	chr9	-	6917	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-36	-95	-36	95	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGAGTGTTTTCCTT	NA	False	NA	NA	False	TATAAA	-22	NA	101129030	100982187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.4	chr9	-	6828	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-49	7	-49	-7	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGTGCGGTTTAGAT	NA	False	NA	NA	False	AATAAA	-30	NA	101129043	100982289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.5	chr9	-	6941	15	NNC	ENSMUSG00000043154.16	novel	6786	14	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.4581740581548	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCAGTGCGGTTTAGA	NA	False	NA	NA	False	AATAAA	-29	NA	101128986	100982290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101108232_101108404_101128860
ES.35969.6	chr9	-	6634	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-50	202	-50	0	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCATATCTGTTACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	101129044	100982484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.7	chr9	-	5667	15	NNC	ENSMUSG00000043154.16	novel	6786	14	NA	NA	-4	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.6130935688913	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATCATATCTGTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	101128998	100982487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100983216_100984133_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.35969.8	chr9	-	6470	14	NNC	ENSMUSG00000043154.16	novel	6786	14	NA	NA	-1649	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	13.9623330988102	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATCATATCTGTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	101090685	100982487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101077245_101077345_101088329
ES.35969.9	chr9	-	6170	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	-48	664	-48	-462	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTCACCCTATTCCT	NA	False	NA	NA	False	TATAAA	-2	NA	101129042	100982946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ES.3597.1	chr10	+	3702	10	FSM	ENSMUSG00000020019.5	ENSMUST00000020204.5	3646	10	-60	4	-60	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTGTCTCCTGGCCA	8703	False	NA	NA	False	AATAAA	-15	NA	93476850	93583065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93477371_93480332_93480863_93518279_93518559_93543139_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93574745_93574815_93576912_93577084_93581578
ES.35970.1	chr9	+	200	1	Intergenic	novelGene_29285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCAATTTTTGCAACA	NA	False	NA	NA	False	NA	NA	NA	102073572	102073772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102073600_102073800
ES.35971.1	chr9	+	156	1	Intergenic	novelGene_29286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102077041	102077197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102077000_102077200
ES.35972.1	chr9	+	174	1	Intergenic	novelGene_29287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACCTGATACATATT	NA	False	NA	NA	False	NA	NA	NA	102078307	102078481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102078300_102078500
ES.35973.1	chr9	-	4558	16	FSM	ENSMUSG00000032537.16	ENSMUST00000035129.14	4667	16	92	17	92	-17	multi-exon	TRUE	canonical	0	0	junction_5	1.4544949486181	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGGTTTACGTAAGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	102231800	101799343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_101800794_101804693_101804850_101806465_101806660_101813267_101813418_101841130_101841347_101848289_101848538_101861280_101861404_101873107_101873173_101873978_101874088_101878903_101879067_101887215_101887341_101918210_101918547_101944069_101944226_102071972_102072655_102100586_102100652_102231480
ES.35974.1	chr9	+	4731	3	ISM	ENSMUSG00000035606.9	ENSMUST00000039390.6	5837	11	31859	-5	16273	5	3prime_fragment	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTAATTATCGATCCAT	NA	False	NA	NA	False	AATAAA	-23	NA	102414807	102423443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102414989_102416196_102416388_102419084
ES.35975.1	chr9	+	158	1	Intergenic	novelGene_29288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAATAAAACTTCAAA	NA	False	NA	NA	False	NA	NA	NA	102494020	102494178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102494000_102494200
ES.35976.1	chr9	+	424	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	-13	178	-13	-3	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGTTTTCGTTTTGT	NA	False	NA	22	True	AATAAA	-22	NA	102503481	102511446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102503546_102506961_102507088_102511212
ES.35976.2	chr9	+	7929	1	FSM	ENSMUSG00000035048.14	ENSMUST00000190354.2	1216	1	-2198	-4515	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503512	102511441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102503500_102511400
ES.35976.3	chr9	+	3799	2	NIC	ENSMUSG00000035048.14	novel	727	3	NA	NA	-4	1	intron_retention	FALSE	canonical	3	1524	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCACTTGGTTTTCGTT	NA	False	NA	18	True	AATAAA	-18	NA	102503518	102511442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102507088_102511212
ES.35976.4	chr9	+	4495	2	ISM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	29	190	1	-7	intron_retention	FALSE	canonical	3	1105	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATATGCCCACTTGG	NA	False	NA	10	True	AATAAA	-10	NA	102503523	102511434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102503546_102506961
ES.35976.5	chr9	+	437	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	275	15	-64	-7	multi-exon	FALSE	canonical	3	126	junction_1	699	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATATGCCCACTTGG	NA	False	NA	10	True	AATAAA	-10	NA	102503797	102511434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102503887_102506961_102507088_102511212
ES.35977.1	chr9	-	4191	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-15	4	-15	-4	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAATGGTCTGTTGTCT	NA	False	NA	NA	False	AATATA	-17	NA	102503748	102461790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ES.35977.10	chr9	-	1840	11	NIC	ENSMUSG00000032534.19	novel	4180	13	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	34.0288113221723	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503738	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102503461
ES.35977.12	chr9	-	2802	13	NNC	ENSMUSG00000032534.19	novel	5861	12	NA	NA	-12	-2465	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	31.2592208618335	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGATTGTACTCT	NA	False	NA	NA	False	AATAAA	-17	NA	102503745	102470062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_102471098_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ES.35977.2	chr9	-	4390	12	ISM	ENSMUSG00000032534.19	ENSMUST00000216281.2	1791	15	3745	-272	-272	-4	intron_retention	FALSE	canonical	3	96	junction_4	9.43266699356922	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGTAACTACAGAGCTT	NA	False	NA	95	True	AATAAA	-23	NA	102499435	102463780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890
ES.35977.3	chr9	-	2224	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	-49	2005	-49	-15	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTTGAAACTAGAGTAA	NA	False	NA	84	True	AATAAA	-12	NA	102503782	102463791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ES.35977.4	chr9	-	3224	1	FSM	ENSMUSG00000032534.19	ENSMUST00000191074.2	484	1	-2734	-6	-2734	6	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTTTATTACCACAG	NA	False	NA	-4	True	AATAAA	-23	NA	102467103	102463879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_102463900_102467100
ES.35977.5	chr9	-	2131	14	NIC	ENSMUSG00000032534.19	novel	1791	15	NA	NA	-67	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	39.0328340013573	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503390	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102498894_102498928_102503102
ES.35977.6	chr9	-	1971	12	NIC	ENSMUSG00000032534.19	novel	4180	13	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	34.0354700737407	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503745	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ES.35977.7	chr9	-	1757	12	NNC	ENSMUSG00000032534.19	novel	4180	13	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.00759110392	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503762	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480092_102480198_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102503461
ES.35977.8	chr9	-	2025	13	NNC	ENSMUSG00000032534.19	novel	1791	15	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	42.1020585403295	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503319	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479618_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503102
ES.35977.9	chr9	-	2580	15	NIC	ENSMUSG00000032534.19	novel	2696	17	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	44.6453142180974	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACATGAATGTTTATTAC	NA	False	NA	-9	True	AATAAA	-18	NA	102503745	102463884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_102464212_102465906_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ES.35978.1	chr9	+	157	1	Intergenic	novelGene_29289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATGTTTA	NA	False	NA	NA	False	NA	NA	NA	102517697	102517854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102517700_102517900
ES.35979.1	chr9	+	210	1	Intergenic	novelGene_29290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGGTAGAGGTGCCT	NA	False	NA	NA	False	AAGAAA	-6	NA	102518385	102518595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102518400_102518600
ES.3598.1	chr10	-	961	6	FSM	ENSMUSG00000085723.3	ENSMUST00000147379.3	908	6	-62	9	-62	-9	multi-exon	FALSE	canonical	0	0	junction_1	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATCTGTCACTTGGTAT	NA	False	NA	NA	False	AATAAA	-10	NA	93519246	93510088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93510453_93511377_93511463_93515111_93515326_93516179_93516228_93516310_93516388_93519073
ES.35980.1	chr9	+	199	1	Intergenic	novelGene_29291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTAAAAATGCTT	NA	False	NA	NA	False	NA	NA	NA	102538989	102539188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102539000_102539200
ES.35981.1	chr9	+	4300	11	NNC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-1656	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4759504139735	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTGTCTGTCTAT	NA	False	NA	16	True	AATAAA	-19	NA	102592214	102610616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102592299_102594161_102594286_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.11	chr9	+	4209	10	NNC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	45	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5799524390562	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCTGTCTGTCTGTC	NA	False	NA	13	True	AATAAA	-16	NA	102594532	102610613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102594653_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.12	chr9	+	4479	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	-152	1	-152	-1	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTGTCTGTCTAT	NA	False	NA	16	True	AATAAA	-19	NA	102594714	102610616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.13	chr9	+	4613	9	NIC	ENSMUSG00000032531.16	novel	4328	10	NA	NA	100	1	intron_retention	FALSE	canonical	3	168	junction_1	20.2357202738128	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCTGTCTGTCTGTC	NA	False	NA	13	True	AATAAA	-16	NA	102594966	102610613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102607376_102607991_102608169_102608846
ES.35981.14	chr9	+	5883	7	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	120	8	120	-3	intron_retention	FALSE	canonical	3	168	junction_1	18.2117178395303	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGATGTCTGTCTGTC	NA	False	NA	9	True	AATAAA	-12	NA	102594986	102610609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466
ES.35981.16	chr9	+	5012	9	NIC	ENSMUSG00000032531.16	novel	4328	10	NA	NA	136	2	intron_retention	FALSE	canonical	3	168	junction_1	19.5048070997895	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTGTCTGTCTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	102595002	102610614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595102_102597279_102598076_102600767_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.19	chr9	+	3649	11	NNC	ENSMUSG00000032531.16	novel	4427	11	NA	NA	140	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	65.4220146433905	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595006	102610615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846_102609098_102609634
ES.35981.2	chr9	+	4279	11	NNC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-145	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.8534774299822	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTGTCTGTCTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	102593725	102610614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102593793_102594161_102594286_102597279_102598076_102600767_102601063_102601885_102602031_102602303_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.20	chr9	+	4035	12	NNC	ENSMUSG00000032531.16	novel	4427	11	NA	NA	141	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.6475139991998	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGATGTCTGTCTGTC	NA	False	NA	9	True	AATAAA	-12	NA	102595007	102610609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846_102609518_102609576_102609683_102609767
ES.35981.21	chr9	+	4797	9	NIC	ENSMUSG00000032531.16	novel	4427	11	NA	NA	142	0	intron_retention	FALSE	canonical	3	168	junction_1	19.6877976167981	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102595008	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102608169_102608846
ES.35981.22	chr9	+	4565	8	NIC	ENSMUSG00000032531.16	novel	4328	10	NA	NA	142	1	intron_retention	FALSE	canonical	0	0	junction_2	72.4881411835405	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCTGTCTGTCTGTC	NA	False	NA	13	True	AATAAA	-16	NA	102595008	102610613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595102_102597279_102598076_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991
ES.35981.24	chr9	+	4454	10	NNC	ENSMUSG00000032531.16	novel	4328	10	NA	NA	174	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5799524390562	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102595040	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102595407_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.25	chr9	+	6093	9	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	406	7	-355	-2	3prime_fragment	FALSE	canonical	3	197	junction_7	12.9204295594225	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGATGTCTGTCTGTCT	NA	False	NA	10	True	AATAAA	-13	NA	102595272	102610610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.26	chr9	+	4175	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102595645	102610615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.28	chr9	+	4329	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	66.4161961505709	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTGTCTGTCTAT	NA	False	NA	16	True	AATAAA	-19	NA	102595675	102610616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595913_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.29	chr9	+	4757	9	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	11	junction_1	69.1104188961404	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102595676	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102608169_102608846
ES.35981.3	chr9	+	4368	10	NNC	ENSMUSG00000032531.16	novel	4222	11	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.5799524390562	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102593835	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102594116_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.30	chr9	+	4934	9	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	0	1	intron_retention	FALSE	canonical	3	7	junction_1	70.4166173569847	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCTGTCTGTCTGTC	NA	False	NA	13	True	AATAAA	-16	NA	102595683	102610613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102595913_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102608169_102608846
ES.35981.31	chr9	+	3566	10	NNC	ENSMUSG00000032531.16	novel	4328	10	NA	NA	-168	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	68.5799524390562	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCTGTCTGTCTGTC	NA	False	NA	13	True	AATAAA	-16	NA	102597317	102610613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846_102609060_102609544
ES.35981.32	chr9	+	3420	9	ISM	ENSMUSG00000032531.16	ENSMUST00000130602.2	3475	10	165	302	165	-297	3prime_fragment	FALSE	canonical	3	197	junction_7	12.9204295594225	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTACAAAGATAAAAGTTTT	NA	False	NA	NA	False	AATACA	-19	NA	102597650	102610315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.33	chr9	+	8184	7	NIC	ENSMUSG00000032531.16	novel	4222	11	NA	NA	-518	0	intron_retention	FALSE	canonical	3	197	junction_5	13.5820551545862	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102598996	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102601063_102601885_102602031_102602301_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.34	chr9	+	2992	8	NNC	ENSMUSG00000032531.16	novel	4332	8	NA	NA	1214	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.2560016821889	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTGTCTGTCTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	102600946	102610614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102601063_102601885_102602031_102602301_102602373_102605616_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.35	chr9	+	2179	4	NNC	ENSMUSG00000032531.16	novel	919	2	NA	NA	-924	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.091494528445	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGATGTCTGTCTGTCT	NA	False	NA	10	True	AATAAA	-13	NA	102607005	102610610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102607035_102607166_102607376_102607991_102608169_102608846
ES.35981.36	chr9	+	157	1	NIC	ENSMUSG00000032531.16	novel	4427	11	NA	NA	-231	-1671	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTCTTTTCATTCTAT	NA	False	NA	NA	False	NA	NA	NA	102607698	102607855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102607700_102607900
ES.35981.4	chr9	+	4349	11	FSM	ENSMUSG00000032531.16	ENSMUST00000153965.8	4222	11	-124	-3	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	86.4759504139735	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102593876	102610615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102594011_102594161_102594286_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.6	chr9	+	4203	10	NIC	ENSMUSG00000032531.16	novel	4222	11	NA	NA	28	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	66.725159524577	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102593898	102610615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102594011_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.7	chr9	+	4770	9	NIC	ENSMUSG00000032531.16	novel	4222	11	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	70.1265596974499	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTCTGTCTGTCTGT	NA	False	NA	12	True	AATAAA	-15	NA	102593983	102610612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102594011_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.8	chr9	+	4302	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	-57	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.4896090146283	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTGTCTGTCTGTCTA	NA	False	NA	15	True	AATAAA	-18	NA	102594430	102610615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102594642_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35981.9	chr9	+	4418	11	NNC	ENSMUSG00000032531.16	novel	4427	11	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.4220146433905	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102594466	102610617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102594642_102594951_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ES.35982.1	chr9	-	174	1	Intergenic	novelGene_29292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102662965	102662791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_102662800_102663000
ES.35983.1	chr9	+	172	1	Intergenic	novelGene_29293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGCTGTCTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	102675231	102675403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102675200_102675400
ES.35984.1	chr9	+	240	1	Intergenic	novelGene_29294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACACCATTTTTTC	NA	False	NA	NA	False	NA	NA	NA	102677026	102677266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102677000_102677300
ES.35985.1	chr9	+	174	1	Intergenic	novelGene_29295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	102706752	102706926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102706800_102706900
ES.35986.1	chr9	+	2327	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-154	679	-99	-268	multi-exon	TRUE	canonical	3	312	junction_7	39.7877019252155	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATAGCTGTCTTAGTGCC	NA	False	NA	26	True	AATAAA	-33	NA	102712016	102784473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.10	chr9	+	2948	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-98	2	-43	-2	multi-exon	FALSE	canonical	3	312	junction_7	39.7877019252155	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCACAGTGTGTGAC	NA	False	NA	50	True	ATTAAA	-30	NA	102712072	102785150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.11	chr9	+	2170	14	NIC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	-28	-276	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_7	144.98214540145	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGGAATAGCTGTC	NA	False	NA	18	True	AATAAA	-25	NA	102712087	102784465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.12	chr9	+	2849	14	NNC	ENSMUSG00000032547.13	novel	2852	15	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	110.287306344966	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCACAGTGTGTGAC	NA	False	NA	50	True	ATTAAA	-30	NA	102712092	102785150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746583_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.13	chr9	+	2612	16	NNC	ENSMUSG00000032547.13	novel	2852	15	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	134.855906639478	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCACAGTGTGTGAC	NA	False	NA	50	True	ATTAAA	-30	NA	102712103	102785150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775772_102775889_102776050_102783235_102783373_102784048_102784428_102784736
ES.35986.14	chr9	+	2653	15	NNC	ENSMUSG00000032547.13	novel	2852	15	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.235793026967	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	46	True	ATTAAA	-26	NA	102712111	102785146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712187_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.15	chr9	+	2353	13	ISM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-54	8415	1	-8	5prime_fragment	FALSE	canonical	3	312	junction_7	40.0322786427819	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCCTAAGTCATCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	102712116	102776737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889
ES.35986.16	chr9	+	2341	15	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	4	-163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	106.419462697461	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGAGTGGTTTGTCTT	NA	False	NA	-98	True	TTTAAA	-26	NA	102712119	102784578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763189_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.17	chr9	+	2379	11	NNC	ENSMUSG00000032547.13	novel	3072	14	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.478150693204	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATACTGCTCACAG	NA	False	NA	42	True	ATTAAA	-22	NA	102712121	102785142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712443_102753042_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.2	chr9	+	2580	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	-61	-14	-61	14	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGCTTGTTTAGTGAC	NA	False	NA	79	True	NA	NA	NA	102712054	102784755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.20	chr9	+	2096	14	NIC	ENSMUSG00000032547.13	novel	2852	15	NA	NA	20	-293	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	109.27231062727	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTATTTAGACACAGA	NA	False	NA	1	True	AATAAA	-8	NA	102712135	102784448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.21	chr9	+	3243	15	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	139.488734824204	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGACAGCTTCCACAG	NA	False	NA	NA	False	AATAAA	-10	NA	102712136	102785502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775766_102775889_102776050_102783235_102783373_102784048
ES.35986.23	chr9	+	2433	15	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	26	-839	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	164.453842541093	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTTAACTTCCTTTA	NA	False	NA	NA	False	CATAAA	-27	NA	102712141	102783902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102774783_102774901_102775657_102775768_102775889_102776050_102783235
ES.35986.25	chr9	+	2674	16	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.07088190665	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATACTGCTCACAGTG	NA	False	NA	44	True	ATTAAA	-24	NA	102712141	102785144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712187_102712394_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.26	chr9	+	3381	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	26	-902	26	139	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGTAACTTAAGCCAC	NA	False	NA	NA	False	TTTAAA	-15	NA	102712141	102785643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.27	chr9	+	2905	16	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	13	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	177.066265059786	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGTATTCAAAATACT	NA	False	NA	34	True	ATTAAA	-14	NA	102712193	102785134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774432_102774534_102774783_102774901_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.29	chr9	+	6293	2	ISM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	65381	276	1743	-276	3prime_fragment	FALSE	canonical	3	399	junction_1	0	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGGAATAGCTGTC	NA	False	NA	18	True	AATAAA	-25	NA	102777496	102784465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_102783373_102784048
ES.35986.3	chr9	+	2557	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-102	397	-47	14	multi-exon	FALSE	canonical	3	312	junction_7	39.7877019252155	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGCTTGTTTAGTGAC	NA	False	NA	79	True	NA	NA	NA	102712068	102784755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.30	chr9	+	3743	1	NIC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	4952	-293	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTATTTAGACACAGA	NA	False	NA	1	True	AATAAA	-8	NA	102780705	102784448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102780700_102784400
ES.35986.31	chr9	+	3630	1	NIC	ENSMUSG00000032547.13	novel	2852	15	NA	NA	5763	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	46	True	ATTAAA	-26	NA	102781516	102785146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_102781500_102785100
ES.35986.5	chr9	+	2961	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	-47	-409	-47	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTCACAGTGTGTGAC	NA	False	NA	50	True	ATTAAA	-30	NA	102712068	102785150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.6	chr9	+	2934	15	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	-45	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	141.304852091108	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAAAATACTGCTCACA	NA	False	NA	41	True	ATTAAA	-21	NA	102712070	102785141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712423_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.7	chr9	+	2272	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	-43	276	-43	-276	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATTTGGAATAGCTGTC	NA	False	NA	18	True	AATAAA	-25	NA	102712072	102784465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35986.9	chr9	+	2787	14	NNC	ENSMUSG00000032547.13	novel	2505	15	NA	NA	-43	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	146.267081640394	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCTCACAGTGTG	NA	False	NA	46	True	ATTAAA	-26	NA	102712072	102785146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746540_102752981_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ES.35987.1	chr9	+	2468	2	Intergenic	novelGene_29296	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	102788760	102791628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102790521_102790920
ES.35988.1	chr9	+	3952	3	NNC	ENSMUSG00000032548.15	novel	3686	4	NA	NA	-3401	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTATTGATTCTTGT	NA	False	NA	NA	False	TTTAAA	-11	NA	102881799	102898048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102882342_102884528_102885915_102896024
ES.35988.2	chr9	+	4059	15	NNC	ENSMUSG00000032548.15	novel	7122	14	NA	NA	-206	-2602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.10901564064219	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTGTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	102884994	102965048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102885048_102885714_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ES.35988.3	chr9	+	4566	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	-46	2602	-46	-2602	multi-exon	FALSE	canonical	2	4	junction_10	4.55472964402691	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTGTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	102885154	102965048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ES.35988.4	chr9	+	4538	14	NNC	ENSMUSG00000032548.15	novel	7122	14	NA	NA	-94	-2183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.95303385600161	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGAGTGTATCATGC	NA	False	NA	NA	False	ATTAAA	-18	NA	102885603	102965467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102885915_102923883_102924022_102927340_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ES.35988.5	chr9	+	143	1	Intergenic	novelGene_29297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGCATGCTTGAGTG	5750	False	NA	NA	False	NA	NA	NA	102905956	102906099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_102906000_102906100
ES.35988.6	chr9	+	3592	12	NNC	ENSMUSG00000032548.15	novel	7122	14	NA	NA	46039	-2602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.48136637958772	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTGTAAATTTGTG	NA	False	NA	NA	False	NA	NA	NA	102931736	102965048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102931824_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ES.35989.1	chr9	-	190	1	Intergenic	novelGene_29298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGTCAGCTCCTATAAA	NA	False	NA	NA	False	NA	NA	NA	102983122	102982932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_102982900_102983100
ES.3599.1	chr10	+	176	1	Intergenic	novelGene_2749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAAGTA	221	False	NA	NA	False	NA	NA	NA	93596202	93596378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93596200_93596400
ES.35990.1	chr9	+	5047	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-40	0	-20	0	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTGTTGACTCTTTCT	193	False	NA	10	True	AATAAA	-23	NA	102988965	103062475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ES.35990.2	chr9	+	5372	10	NNC	ENSMUSG00000032549.8	novel	5007	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.55426347853585	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTGTTGACTCTTTCT	211	False	NA	10	True	AATAAA	-23	NA	102988983	103062475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102989426_103005111_103005229_103005971_103006198_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ES.35990.3	chr9	+	2730	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	141	2136	141	-2136	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACTTGTGGTTGTCTT	374	False	NA	NA	False	AAGAAA	-16	NA	102989146	103060339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ES.35990.4	chr9	+	1123	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	184	3700	184	-3700	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGCTTTTTTGTTT	417	False	NA	NA	False	NA	NA	NA	102989189	103058775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ES.35990.5	chr9	+	853	7	NNC	ENSMUSG00000032549.8	novel	5007	8	NA	NA	258	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.67390962214756	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAAGCTCCTTGTTGAC	491	False	NA	3	True	AATAAA	-16	NA	102989263	103062468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103062202
ES.35990.6	chr9	+	2489	3	NNC	ENSMUSG00000032549.8	novel	5007	8	NA	NA	23088	-20249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTTGTCTGTTCG	587	False	NA	NA	False	NA	NA	NA	103012093	103019607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103012327_103013344_103013574_103017580
ES.35990.7	chr9	+	181	1	Intergenic	novelGene_29300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGCTTTTCTGT	NA	False	NA	NA	False	NA	NA	NA	103029066	103029247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103029100_103029200
ES.35991.1	chr9	-	178	1	Intergenic	novelGene_29299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103002459	103002281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103002300_103002500
ES.35992.1	chr9	+	379	1	Intergenic	novelGene_29301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	103077974	103078353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103078000_103078400
ES.35993.1	chr9	-	2883	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	29	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTATTTGGGA	NA	False	NA	NA	False	NA	NA	NA	103079299	103065228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.11	chr9	-	4036	5	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	45	-16	intron_retention	FALSE	non_canonical	3	124	junction_1	67.5143503264306	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATGACTATACTGAAAG	NA	False	NA	-16	True	TATAAA	-15	NA	103079283	103066304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103068323_103069411_103069549_103074736_103076066_103078485
ES.35993.12	chr9	-	1745	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	46	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTGTTCTCATTGC	NA	False	NA	-3	True	TTTAAA	-33	NA	103079282	103066347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066800_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.13	chr9	-	1689	8	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	3	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	101.759821267973	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTGTTCTCATTGC	NA	False	NA	-3	True	TTTAAA	-33	NA	103079325	103066347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067621_103068267_103068323_103069411_103069549_103074736_103074812_103075980_103076066_103078485_103078581_103079110
ES.35993.14	chr9	-	1788	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	5	-59	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTGTTCTCATTGC	NA	False	NA	-3	True	TTTAAA	-33	NA	103079323	103066347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066745_103066890_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.15	chr9	-	1772	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	-1	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTGTGTTCTCATT	NA	False	NA	-5	True	TTTAAA	-31	NA	103079329	103066349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066818_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.17	chr9	-	1721	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	10	-76	at_least_one_novel_splicesite	FALSE	non_canonical	2	2	junction_2	100.962106449774	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATGCTGTCTTCAAC	NA	False	NA	-20	True	AATACA	-38	NA	103079318	103066364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067676_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.18	chr9	-	2926	7	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	4	-88	intron_retention	FALSE	non_canonical	0	0	junction_1	102.787807318443	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACCTTTTTAAAGTGAT	NA	False	NA	-32	True	AATACA	-26	NA	103079324	103066376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066800_103067621_103068267_103068323_103069411_103069549_103074736_103076066_103078485_103078581_103079110
ES.35993.19	chr9	-	2248	7	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	56	-94	intron_retention	FALSE	non_canonical	0	0	junction_4	105.132324028129	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTACCTTTTTAA	NA	False	NA	-38	True	AATACA	-20	NA	103079272	103066382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103068323_103069411_103069549_103074736_103074812_103075980_103076066_103078485_103078581_103079110
ES.35993.2	chr9	-	2908	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1596624119289	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTTTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	103079327	103065230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066666_103066812_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.20	chr9	-	2823	7	NNC	ENSMUSG00000032553.15	novel	3166	6	NA	NA	3	-94	intron_retention	FALSE	non_canonical	3	124	junction_1	57.6040122059412	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTACCTTTTTAA	NA	False	NA	-38	True	AATACA	-20	NA	103079325	103066382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067621_103068267_103068323_103069411_103069549_103074736_103076066_103078485_103078581_103079110
ES.35993.21	chr9	-	1563	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	57	-132	at_least_one_novel_splicesite	FALSE	non_canonical	3	124	junction_1	54.7454219500571	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGCATTTTAAATACAT	NA	False	NA	-76	True	AATACA	-15	NA	103079271	103066420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.22	chr9	-	1211	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	51	1802	43	567	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGCATAATACAGTGTC	NA	False	NA	NA	False	NA	NA	NA	103079285	103067032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.23	chr9	-	954	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	34	2076	26	293	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTTCTTGAGTTCTTG	NA	False	NA	NA	False	GATAAA	-18	NA	103079302	103067306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.3	chr9	-	2851	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	13	-1	at_least_one_novel_splicesite	TRUE	non_canonical	2	2	junction_2	100.962106449774	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTGTCTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	103079315	103065231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067676_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.5	chr9	-	2336	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	64	-409	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	101.759821267973	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAGAATCAGTACATCAA	NA	False	NA	NA	False	AATAAA	-15	NA	103079264	103065639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067621_103068267_103068323_103069411_103069549_103074736_103074812_103075980_103076066_103078485_103078581_103079110
ES.35993.6	chr9	-	2496	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	1	-411	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGGAGAATCAGTACATC	NA	False	NA	NA	False	AATAAA	-13	NA	103079327	103065641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066800_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.7	chr9	-	1749	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	124	junction_1	54.7454219500571	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079325	103066288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066653_103066898_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.8	chr9	-	1835	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079314	103066288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066724_103066872_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35993.9	chr9	-	1851	8	NNC	ENSMUSG00000032553.15	novel	3064	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.1596624119289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATTGAGTCAAATGAT	NA	False	NA	0	True	TATAAA	-31	NA	103079327	103066288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103066696_103066841_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ES.35994.1	chr9	-	2354	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	140	77	-31	-77	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAACTCCATTCTTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	103107503	103086070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
ES.35994.3	chr9	-	2353	17	NNC	ENSMUSG00000032554.16	novel	2571	17	NA	NA	-30	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	12.5343278639104	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCCCAAACTCCATT	NA	False	NA	-10	True	AATAAA	-16	NA	103107502	103086076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107366
ES.35994.4	chr9	-	3547	15	NIC	ENSMUSG00000032554.16	novel	2339	18	NA	NA	0	-84	intron_retention	FALSE	canonical	0	0	junction_1	13.3456788084062	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCCCAAACTCCAT	NA	False	NA	-11	True	AATAAA	-15	NA	103107472	103086077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103087878_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
ES.35995.1	chr9	+	178	1	Intergenic	novelGene_29302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGCTAGCT	NA	False	NA	NA	False	NA	NA	NA	103160653	103160831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103160700_103160800
ES.35996.1	chr9	-	1681	13	NNC	ENSMUSG00000033688.11	novel	2284	17	NA	NA	-9555	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.03749163316573	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCTTCACTGAGTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	103152979	103127730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103127862_103128989_103129177_103131838_103132024_103133763_103133829_103136568_103136711_103140228_103140385_103143401_103143459_103144830_103144922_103145510_103145654_103146810_103146983_103149685_103149865_103152139_103152196_103152862
ES.35996.2	chr9	-	2517	15	ISM	ENSMUSG00000033688.11	ENSMUST00000035163.10	2284	17	53	3504	-20	-2188	5prime_fragment	TRUE	canonical	0	0	junction_6	0.880630571852711	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AAGAAA	-36	NA	103165443	103131223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_103132024_103133763_103133829_103136568_103136711_103140228_103140385_103143401_103143459_103144830_103144922_103145510_103145654_103146810_103146983_103149685_103149865_103152139_103152196_103154654_103154803_103156571_103156734_103158233_103158343_103159693_103159867_103165379
ES.35997.1	chr9	+	5303	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-74	-5	-74	5	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGTTCATTTAGATC	879	False	NA	19	True	AATAAA	-24	NA	103182339	103227632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.100	chr9	+	5582	23	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	4334	-28	intron_retention	FALSE	canonical	3	379	junction_9	80.7383412764104	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	3664	False	NA	-14	True	NA	NA	NA	103187035	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103201699_103202840_103203053_103205605_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.101	chr9	+	8653	19	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	7314	0	intron_retention	FALSE	canonical	3	490	junction_2	63.6378643401692	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	6644	False	NA	14	True	AATAAA	-19	NA	103190015	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.102	chr9	+	3926	21	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	12772	215	-9823	-215	3prime_fragment	FALSE	canonical	3	379	junction_6	81.679786361131	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGGGTTATTTCATGT	NA	False	NA	NA	False	CATAAA	-13	NA	103195185	103227412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.104	chr9	+	3163	17	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-4365	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	210.407640070412	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	NA	False	NA	9	True	AATAAA	-14	NA	103200643	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.106	chr9	+	10993	11	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-2095	-28	intron_retention	FALSE	canonical	2	10	junction_6	233.875800372762	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	NA	False	NA	-14	True	NA	NA	NA	103202913	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.107	chr9	+	4131	14	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	12	0	intron_retention	FALSE	canonical	3	480	junction_2	66.2464468177451	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	NA	False	NA	14	True	AATAAA	-19	NA	103205046	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.108	chr9	+	3171	15	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	116	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	225.759308348786	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	NA	False	NA	-14	True	NA	NA	NA	103205150	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219130_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.109	chr9	+	4370	5	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	24503	13514	1882	1	internal_fragment	FALSE	canonical	3	480	junction_1	78.4135670659102	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	AATATA	-26	NA	103206916	103214113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262
ES.35997.110	chr9	+	2908	4	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-1463	-2	intron_retention	FALSE	canonical	3	578	junction_2	54.2402064892825	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	AATATA	-23	NA	103208464	103214110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103210254_103211254_103211379_103213010_103213158_103213262
ES.35997.111	chr9	+	6592	12	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-697	-28	intron_retention	FALSE	canonical	1	6	junction_5	191.71966448976	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	341	False	NA	-14	True	NA	NA	NA	103209230	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215389_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.112	chr9	+	222	1	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	1330	-2633	mono-exon	FALSE	NA	NA	NA	NA	NA	729	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTGTGTGGTGGCATG	2368	False	NA	NA	False	AATAAA	-14	NA	103211257	103211479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103211300_103211500
ES.35997.113	chr9	+	1628	2	NNC	ENSMUSG00000032555.11	novel	4023	4	NA	NA	1509	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAGAAAG	2547	False	NA	NA	False	AATATA	-23	NA	103211436	103214110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103211891_103212936
ES.35997.115	chr9	+	1816	2	Intergenic	novelGene_29303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGAAAGGATGTCCTC	1318	False	NA	NA	False	NA	NA	NA	103217150	103219005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103217554_103217592
ES.35997.116	chr9	+	5150	2	ISM	ENSMUSG00000032555.11	ENSMUST00000185972.2	828	3	-1102	-527	-481	0	intron_retention	FALSE	canonical	3	636	junction_1	0	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	1339	False	NA	14	True	AATAAA	-19	NA	103222324	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103223973_103224125
ES.35997.117	chr9	+	4822	1	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-28	-28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	1792	False	NA	-14	True	NA	NA	NA	103222777	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103222800_103227600
ES.35997.12	chr9	+	5300	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_9	131.581589432719	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	907	False	NA	14	True	AATAAA	-19	NA	103182367	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197562_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.13	chr9	+	5189	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-45	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.22913147214	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATTTGTTCATTTAGA	908	False	NA	17	True	AATAAA	-22	NA	103182368	103227630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210211_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.14	chr9	+	3969	21	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-44	8117	-44	270	5prime_fragment	FALSE	canonical	3	379	junction_13	65.3789721546615	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAATTGTCATTTTT	909	False	NA	NA	False	AATATA	-23	NA	103182369	103219510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126
ES.35997.16	chr9	+	5305	29	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	168.304980100206	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	909	False	NA	14	True	AATAAA	-19	NA	103182369	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188200_103188238_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.17	chr9	+	5277	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-44	-12	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	169.246850991812	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAACTTAAACTGTATTG	909	False	NA	2	True	AATAAA	-7	NA	103182369	103227615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185952_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197562_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.18	chr9	+	3736	7	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-44	32589	-44	6319	5prime_fragment	FALSE	canonical	3	482	junction_5	40.5233129061395	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAACTTTTATTTTTT	909	False	NA	NA	False	NA	NA	NA	103182369	103195038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252
ES.35997.19	chr9	+	5231	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-44	-28	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	134.201433268643	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	909	False	NA	-14	True	NA	NA	NA	103182369	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185952_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.2	chr9	+	7944	27	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-55	28	-55	-28	intron_retention	FALSE	canonical	3	379	junction_13	77.164314037946	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	898	False	NA	-14	True	NA	NA	NA	103182358	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.20	chr9	+	4613	27	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	-44	3348	-44	-8	5prime_fragment	FALSE	canonical	3	379	junction_13	77.164314037946	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGGTTTGTCACATT	909	False	NA	NA	False	AATATA	-13	NA	103182369	103224279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.21	chr9	+	5072	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-43	-28	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	135.955592297349	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	910	False	NA	-14	True	NA	NA	NA	103182370	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.24	chr9	+	9317	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-42	-27	intron_retention	FALSE	canonical	1	1	junction_22	189.65043288667	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAAAAAAAATAGCA	911	False	NA	-13	True	NA	NA	NA	103182371	103227600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221967_103222154_103222940_103223079_103223339_103223405_103223882_103223973_103224125_103224288_103226980
ES.35997.25	chr9	+	5355	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-42	0	intron_retention	FALSE	canonical	3	379	junction_13	74.9765249257448	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	911	False	NA	14	True	AATAAA	-19	NA	103182371	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.26	chr9	+	5966	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-42	0	intron_retention	FALSE	canonical	3	379	junction_12	77.8233092050274	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	911	False	NA	14	True	AATAAA	-19	NA	103182371	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.27	chr9	+	7835	26	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-39	0	intron_retention	FALSE	canonical	2	10	junction_19	129.87039693479	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	914	False	NA	14	True	AATAAA	-19	NA	103182374	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.29	chr9	+	8499	26	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-36	-28	intron_retention	FALSE	canonical	3	111	junction_15	110.880476189454	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	917	False	NA	-14	True	NA	NA	NA	103182377	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.3	chr9	+	5344	29	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	160.873365713279	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	898	False	NA	14	True	AATAAA	-19	NA	103182358	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223339_103223405_103223882_103223973_103224125_103224288_103226980
ES.35997.31	chr9	+	8557	25	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-35	-28	intron_retention	FALSE	canonical	2	10	junction_19	130.047847765095	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	918	False	NA	-14	True	NA	NA	NA	103182378	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.33	chr9	+	7970	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_7	168.460698261377	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	920	False	NA	14	True	AATAAA	-19	NA	103182380	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103193005_103193166_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.34	chr9	+	4640	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	170.29326757734	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTTTGTCACATTCT	921	False	NA	NA	False	AATATA	-15	NA	103182381	103224281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188200_103188238_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.36	chr9	+	3916	20	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	140.020516897898	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	921	False	NA	NA	False	AATATA	-25	NA	103182381	103214112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103213576
ES.35997.4	chr9	+	7794	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-54	3	intron_retention	FALSE	canonical	3	111	junction_15	111.487342397211	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATTTGTTCATTTAGA	899	False	NA	17	True	AATAAA	-22	NA	103182359	103227630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.40	chr9	+	7716	25	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-25	-28	intron_retention	FALSE	canonical	3	30	junction_15	130.909260081172	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	928	False	NA	-14	True	NA	NA	NA	103182388	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.41	chr9	+	5235	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-21	-28	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_17	133.883125740418	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	932	False	NA	-14	True	NA	NA	NA	103182392	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103212992_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.42	chr9	+	7873	26	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_21	171.666420711798	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	936	False	NA	14	True	AATAAA	-19	NA	103182396	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215389_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221988_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.43	chr9	+	8629	25	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-9	0	intron_retention	FALSE	canonical	3	482	junction_5	61.0965623464656	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	944	False	NA	14	True	AATAAA	-19	NA	103182404	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.45	chr9	+	5195	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	134.823503993484	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGATTTGTTCATTTA	947	False	NA	15	True	AATAAA	-20	NA	103182407	103227628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185979_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.46	chr9	+	11201	25	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-5	-28	intron_retention	FALSE	canonical	3	480	junction_14	64.4308280035436	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	948	False	NA	-14	True	NA	NA	NA	103182408	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.48	chr9	+	8492	26	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-3	0	intron_retention	FALSE	canonical	2	3	junction_25	131.07655167878	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	950	False	NA	14	True	AATAAA	-19	NA	103182410	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224246_103226980
ES.35997.50	chr9	+	5106	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_21	153.540529182066	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	956	False	NA	9	True	AATAAA	-14	NA	103182416	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.51	chr9	+	5183	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	134.814550264291	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	956	False	NA	-14	True	NA	NA	NA	103182416	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213020_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.52	chr9	+	5220	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	133.999058203598	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	956	False	NA	-14	True	NA	NA	NA	103182416	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195158_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.53	chr9	+	10467	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3	0	intron_retention	FALSE	canonical	3	480	junction_14	66.5072146462322	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	956	False	NA	14	True	AATAAA	-19	NA	103182416	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.54	chr9	+	5208	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_19	133.777962347602	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTTGTTCATTTAG	960	False	NA	16	True	AATAAA	-21	NA	103182420	103227629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215389_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.55	chr9	+	5177	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_16	115.358806863575	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	960	False	NA	14	True	AATAAA	-19	NA	103182420	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.56	chr9	+	5962	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	7	-5	intron_retention	FALSE	canonical	0	0	junction_18	134.768396555198	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	960	False	NA	9	True	AATAAA	-14	NA	103182420	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213266_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.59	chr9	+	5239	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	8	4	intron_retention	FALSE	canonical	2	10	junction_20	132.700713223181	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTGTTCATTTAGAT	961	False	NA	18	True	AATAAA	-23	NA	103182421	103227631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.6	chr9	+	7836	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-54	5	intron_retention	FALSE	canonical	3	480	junction_14	65.9353839153986	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGTTCATTTAGATC	899	False	NA	19	True	AATAAA	-24	NA	103182359	103227632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.60	chr9	+	7791	26	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	8	-28	intron_retention	FALSE	non_canonical	0	0	junction_24	158.338624472995	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	961	False	NA	-14	True	NA	NA	NA	103182421	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223974_103224125_103224288_103226980
ES.35997.63	chr9	+	7621	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	0	intron_retention	FALSE	canonical	3	30	junction_16	129.675940713765	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	962	False	NA	14	True	AATAAA	-19	NA	103182422	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.64	chr9	+	5493	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	129.73367253243	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	962	False	NA	14	True	AATAAA	-19	NA	103182422	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203331_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.66	chr9	+	3856	20	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	190.507981089312	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTTTAGTGTAGCTG	962	False	NA	NA	False	NA	NA	NA	103182422	103214138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183300_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103213576
ES.35997.67	chr9	+	5480	28	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	-5	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	134.051952339106	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	962	False	NA	9	True	AATAAA	-14	NA	103182422	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182841_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.68	chr9	+	5173	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_27	133.50683156331	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	962	False	NA	14	True	AATAAA	-19	NA	103182422	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224246_103226980
ES.35997.69	chr9	+	5140	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_21	131.218265482208	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	962	False	NA	9	True	AATAAA	-14	NA	103182422	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219278_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.7	chr9	+	5130	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	132.54375184763	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	900	False	NA	14	True	AATAAA	-19	NA	103182360	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.71	chr9	+	7572	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-6	-28	intron_retention	FALSE	canonical	2	2	junction_7	133.002772903425	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	963	False	NA	-14	True	NA	NA	NA	103182423	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.72	chr9	+	3755	10	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	10	27604	-6	-6817	5prime_fragment	FALSE	canonical	3	482	junction_5	41.6576286494006	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACTGTACATCCCAATA	963	False	NA	NA	False	NA	NA	NA	103182423	103200023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672
ES.35997.74	chr9	+	4105	23	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	16	6294	0	-1745	5prime_fragment	FALSE	canonical	3	379	junction_13	68.1413364672076	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATCATGTGTAAAGGG	969	False	NA	NA	False	AATACA	-13	NA	103182429	103221333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123
ES.35997.75	chr9	+	4787	14	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	16	19625	0	1162	5prime_fragment	FALSE	canonical	3	379	junction_13	61.6758082674543	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGTCTTGTTTAATGC	969	False	NA	NA	False	NA	NA	NA	103182429	103208002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605
ES.35997.77	chr9	+	7719	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_26	130.948700376054	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	969	False	NA	14	True	AATAAA	-19	NA	103182429	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224246_103226980
ES.35997.79	chr9	+	5174	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	168.695194321313	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	970	False	NA	-14	True	NA	NA	NA	103182430	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221991_103222154_103222940_103223079_103223882_103223977_103224132_103224288_103226980
ES.35997.82	chr9	+	4879	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	1	466	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	134.22915331626	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTGGCTGCCATTGAA	970	False	NA	NA	False	TATAAA	-36	NA	103182430	103224753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125
ES.35997.83	chr9	+	7749	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_4	132.081139890572	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	970	False	NA	14	True	AATAAA	-19	NA	103182430	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187149_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.84	chr9	+	5056	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	133.761318162937	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	971	False	NA	14	True	AATAAA	-19	NA	103182431	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.86	chr9	+	10630	24	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3	-28	intron_retention	FALSE	canonical	3	111	junction_15	112.30417108505	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	972	False	NA	-14	True	NA	NA	NA	103182432	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103220896_103221123_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.87	chr9	+	3589	7	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	5	6319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	211.467688627207	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAACTTTTATTTTTT	974	False	NA	NA	False	NA	NA	NA	103182434	103195038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188774_103188875_103189970_103190168_103192252
ES.35997.89	chr9	+	5069	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	8	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	168.886467940017	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAAAATAGC	977	False	NA	-14	True	NA	NA	NA	103182437	103227599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221945_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.9	chr9	+	7918	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	-48	4	intron_retention	FALSE	canonical	3	482	junction_5	62.9853824311641	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTGTTCATTTAGAT	905	False	NA	18	True	AATAAA	-23	NA	103182365	103227631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.90	chr9	+	4642	23	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	31	5742	15	-1193	5prime_fragment	FALSE	canonical	3	379	junction_13	68.1413364672076	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTAGGTTGATCATT	984	False	NA	NA	False	ATTAAA	-16	NA	103182444	103221885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123
ES.35997.91	chr9	+	5543	23	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	33	4839	17	-290	intron_retention	FALSE	canonical	3	379	junction_13	68.1413364672076	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTGTTCTCTATCAT	986	False	NA	NA	False	AATAAA	-15	NA	103182446	103222788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123
ES.35997.92	chr9	+	6610	18	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	21	-1	intron_retention	FALSE	canonical	3	480	junction_14	52.7281990568476	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAGAAAGA	990	False	NA	NA	False	AATATA	-24	NA	103182450	103214111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262
ES.35997.95	chr9	+	3975	20	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	36	1675	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	139.121521641813	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGACTTTAATTTTCT	1005	False	NA	NA	False	NA	NA	NA	103182465	103215787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103182841_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378
ES.35997.98	chr9	+	5445	27	ISM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	504	0	216	0	3prime_fragment	FALSE	canonical	3	379	junction_12	77.9481697011759	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	1457	False	NA	14	True	AATAAA	-19	NA	103182917	103227627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ES.35997.99	chr9	+	4888	27	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	3352	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	166.718254343551	789	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGTATTGATTTGTT	2682	False	NA	9	True	AATAAA	-14	NA	103186053	103227622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223339_103223367_103223882_103223973_103224125_103224288_103226980
ES.35998.1	chr9	-	174	1	Antisense	novelGene_ENSMUSG00000032555.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9235	False	NA	NA	False	NA	NA	NA	103212969	103212795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_103212800_103213000
ES.35999.1	chr9	+	822	1	Antisense	novelGene_ENSMUSG00000032803.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTAAGGATAATCCTGG	3840	False	NA	NA	False	NA	NA	NA	103231799	103232621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_103231800_103232600
ES.36.1	chr1	-	491	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAATGAATGTATTT	NA	False	NA	NA	False	NA	NA	NA	6303547	6303056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6303100_6303500
ES.360.1	chr1	-	171	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	39787267	39787096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39787100_39787300
ES.3600.1	chr10	+	173	1	Intergenic	novelGene_2750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	93629615	93629788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93629600_93629800
ES.36000.1	chr9	-	5379	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-114	-1478	-33	1464	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTAAAGTGACTATGT	NA	False	NA	NA	False	NA	NA	NA	103242851	103228828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.10	chr9	-	3940	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189875.8	554	5	-566	-2820	-74	0	multi-exon	FALSE	canonical	3	42	junction_2	179.509052696514	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242892	103230302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233633_103237074_103237218_103241173_103241251_103242252
ES.36000.12	chr9	-	3170	5	NNC	ENSMUSG00000032803.16	novel	3387	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.133843805298	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242840	103230302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103232505_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.13	chr9	-	3828	5	FSM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	-87	0	-4	0	multi-exon	FALSE	canonical	3	39	junction_4	188.321533553654	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242183	103230302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ES.36000.14	chr9	-	4771	3	ISM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	4054	-2844	3332	2	3prime_fragment	FALSE	canonical	3	61	junction_1	228	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGTGGAATGTGATGC	NA	False	NA	-10	True	AATAAA	-12	NA	103238764	103230304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_103233226_103233478_103233639_103237074
ES.36000.15	chr9	-	4728	4	NNC	ENSMUSG00000032803.16	novel	3741	5	NA	NA	1591	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	223.465632455841	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGTGGAATGTGATGC	NA	False	NA	-10	True	AATAAA	-12	NA	103240505	103230304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103233229_103233478_103233639_103237074_103237218_103239004
ES.36000.16	chr9	-	3250	6	NNC	ENSMUSG00000032803.16	novel	3387	5	NA	NA	-47	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	181.255620602507	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGTGGAATGTGATGC	NA	False	NA	-10	True	AATAAA	-12	NA	103242865	103230304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103232513_103233478_103233633_103237074_103237218_103239697_103239753_103241173_103241251_103242252
ES.36000.18	chr9	-	3126	6	NNC	ENSMUSG00000032803.16	novel	3387	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	219.354872296013	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATGGTGGAATGTGAT	NA	False	NA	-12	True	AATAAA	-10	NA	103242851	103230306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252_103242567_103242625
ES.36000.19	chr9	-	2997	5	FSM	ENSMUSG00000032803.16	ENSMUST00000190226.7	3107	5	106	4	24	0	multi-exon	FALSE	canonical	3	39	junction_4	215.031974366604	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATGGTGGAATGTGAT	NA	False	NA	-12	True	AATAAA	-10	NA	103242072	103230306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ES.36000.2	chr9	-	4073	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-130	-156	-49	142	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGGCTGCAATTTAG	NA	False	NA	NA	False	ATTAAA	-10	NA	103242867	103230150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.20	chr9	-	3907	5	NNC	ENSMUSG00000032803.16	novel	3787	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197.593648683352	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATGGTGGAATGTGAT	NA	False	NA	-12	True	AATAAA	-10	NA	103242851	103230306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103233229_103233478_103233645_103237074_103237218_103241173_103241251_103242252
ES.36000.21	chr9	-	3949	6	NNC	ENSMUSG00000032803.16	novel	3787	5	NA	NA	89	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	232.749994629431	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTGTCCATTGCAC	NA	False	NA	NA	False	AATACA	-12	NA	103242950	103230407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103233229_103233478_103233639_103237074_103237218_103239004_103239055_103241173_103241251_103242252
ES.36000.22	chr9	-	3521	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	165	101	165	-101	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTGTCCATTGCAC	NA	False	NA	NA	False	AATACA	-12	NA	103242572	103230407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.23	chr9	-	2509	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-130	1408	-49	-1408	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGGTAACTGGATTTAAT	NA	False	NA	NA	False	GGGGCT	-30	NA	103242867	103231714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.24	chr9	-	2102	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-103	1788	-22	1028	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTCATTCAAACATCTT	NA	False	NA	NA	False	TATAAA	-16	NA	103242840	103232094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.25	chr9	-	1175	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-199	2811	103	5	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGGAAAATTTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	103242936	103233117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.26	chr9	-	1132	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189875.8	554	5	-574	-4	-82	4	multi-exon	FALSE	canonical	3	42	junction_2	179.509052696514	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGATGGAAAATTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	103242900	103233118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233633_103237074_103237218_103241173_103241251_103242252
ES.36000.27	chr9	-	4666	2	NNC	ENSMUSG00000032803.16	novel	3741	5	NA	NA	4266	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGCATCAGATGGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	103237830	103233125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103236129_103236167
ES.36000.3	chr9	-	4044	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	-243	-14	59	0	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCTTTCTGTTGAAA	NA	False	NA	2	True	AATAAA	-24	NA	103242980	103230292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.30	chr9	-	4050	1	FSM	ENSMUSG00000032803.16	ENSMUST00000190127.2	3377	1	-673	0	-34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAACCTCTTG	NA	False	NA	NA	False	AAAAAG	-3	NA	103242852	103238802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103238800_103242900
ES.36000.31	chr9	-	1264	1	FSM	ENSMUSG00000032803.16	ENSMUST00000190127.2	3377	1	-686	2799	-47	-2799	mono-exon	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTTTAAAGATCACAT	NA	False	NA	NA	False	NA	NA	NA	103242865	103241601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103241600_103242900
ES.36000.4	chr9	-	3333	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	47	7	47	3	multi-exon	FALSE	canonical	3	85	junction_1	174.534201519358	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGAATGTGATGCTTTCT	NA	False	NA	-5	True	AATAAA	-17	NA	103242992	103230299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ES.36000.5	chr9	-	3237	5	NIC	ENSMUSG00000032803.16	novel	3387	5	NA	NA	-85	2	combination_of_known_junctions	TRUE	canonical	3	42	junction_2	203.657187449891	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGAATGTGATGCTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	103242903	103230300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103232513_103233478_103233633_103237074_103237218_103241173_103241251_103242252
ES.36000.8	chr9	-	7572	4	NNC	ENSMUSG00000032803.16	novel	3787	5	NA	NA	-52	1	intron_retention	TRUE	non_canonical	0	0	junction_1	221.433210396875	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGAATGTGATGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	103242870	103230301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103236129_103236167_103237218_103241173_103241251_103242252
ES.36000.9	chr9	-	8167	3	ISM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	-59	0	23	0	intron_retention	FALSE	canonical	3	423	junction_1	47	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242155	103230302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_103233229_103233478_103233639_103237074
ES.36001.1	chr9	+	3111	1	Intergenic	novelGene_29304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCCGTGCAGTACCCCA	NA	False	NA	NA	False	NA	NA	NA	103243278	103246389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103243300_103246400
ES.36002.1	chr9	+	160	1	Intergenic	novelGene_29305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	103272051	103272211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103272100_103272200
ES.36003.1	chr9	-	156	1	Intergenic	novelGene_29306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	103294791	103294635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103294600_103294800
ES.36004.1	chr9	-	1411	7	NNC	ENSMUSG00000032556.12	novel	1662	7	NA	NA	-1803	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.816496580927726	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCATTTGCTGTGGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	103328098	103302121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103302344_103303755_103303977_103309857_103309990_103325747_103325910_103327003_103327161_103327249_103327317_103327648
ES.36004.2	chr9	-	3137	1	NIC	ENSMUSG00000032556.12	novel	1662	7	NA	NA	-1611	-22647	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTATCGAAACAGCAAG	NA	False	NA	NA	False	NA	NA	NA	103327906	103324769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103324800_103327900
ES.36005.1	chr9	+	3487	5	NNC	ENSMUSG00000111278.2	novel	594	3	NA	NA	14644	1260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.433012701892219	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCGTTTATCTTGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	103413629	103424436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103415431_103415507_103415604_103420113_103420162_103420840_103420953_103423006
ES.36006.1	chr9	+	5399	1	Genic_Genomic	ENSMUSG00000099616.2	novel	NA	NA	NA	NA	3404	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAATTGGACTGTCTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	103437692	103443091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_103437700_103443100
ES.36007.1	chr9	+	3470	1	Antisense	novelGene_ENSMUSG00000042757.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAATAAAAAA	NA	False	NA	NA	False	AAAACA	-36	NA	103625700	103629170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_103625700_103629200
ES.36008.10	chr9	-	827	2	FSM	ENSMUSG00000042757.17	ENSMUST00000186455.3	1591	2	-73	837	-26	-837	multi-exon	FALSE	canonical	3	33	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	103639062	103629448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103630167_103638953
ES.36008.2	chr9	-	3696	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	-14	-832	-14	1	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGTCGCTAATACATTT	NA	False	NA	NA	False	AATAAA	-21	NA	103639050	103360144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
ES.36008.4	chr9	-	2257	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	-68	661	-68	0	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGTTGCACTGATTGC	NA	False	NA	NA	False	AATAAA	-14	NA	103639104	103361637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
ES.36008.6	chr9	-	2008	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	-20	157	15	-154	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATATAACCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	103639013	103361791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
ES.36008.7	chr9	-	2618	1	Intergenic	novelGene_29307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGCCAGACACACGATATT	9157	False	NA	NA	False	NA	NA	NA	103417287	103414669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103414700_103417300
ES.36008.8	chr9	-	1559	1	Intergenic	novelGene_29308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTCTGCTCCGTGTGTT	2509	False	NA	NA	False	NA	NA	NA	103447397	103445838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103445800_103447400
ES.36008.9	chr9	-	183	1	Intergenic	novelGene_29309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGATTTTTAAAAAAA	2988	False	NA	NA	False	NA	NA	NA	103486374	103486191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103486200_103486400
ES.36009.1	chr9	+	183	1	Intergenic	novelGene_29310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTTAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	103841333	103841516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_103841300_103841500
ES.3601.1	chr10	+	393	1	Intergenic	novelGene_2751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	93637878	93638271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93637900_93638300
ES.36010.1	chr9	+	5362	27	FSM	ENSMUSG00000032558.20	ENSMUST00000194774.6	4722	27	63	-703	-41	-6	multi-exon	TRUE	canonical	2	3	junction_1	6.38461538461538	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTTTGGCCAAGTTT	NA	False	NA	8	True	AATAAA	-22	NA	103879915	103921011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103880001_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.10	chr9	+	5288	26	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	2163	0	1942	0	3prime_fragment	FALSE	canonical	3	11	junction_16	5.64326146833549	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCCAAGTTTAGTCAA	NA	False	NA	14	True	AATAAA	-28	NA	103881907	103921017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.11	chr9	+	3502	13	Fusion	ENSMUSG00000032558.20_ENSMUSG00000101152.2	novel	418	4	NA	NA	-5100	-82	multi-exon	FALSE	canonical	0	0	junction_1	8.76031138462301	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTTGCAGTCTGTAT	NA	False	NA	-68	True	AATAAA	-18	NA	103903958	103920935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_103904038_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.12	chr9	+	3286	11	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	29343	82	29	-82	3prime_fragment	FALSE	canonical	3	11	junction_1	6.32139225171164	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTTGCAGTCTGTAT	NA	False	NA	-68	True	AATAAA	-18	NA	103909087	103920935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.13	chr9	+	3095	8	ISM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	32971	77	-331	-77	3prime_fragment	FALSE	canonical	3	24	junction_1	2.71052370871575	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCAGTCTGTATTAGAG	NA	False	NA	-63	True	AATAAA	-23	NA	103912715	103920940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.15	chr9	+	4526	3	NIC	ENSMUSG00000101152.2	novel	365	4	NA	NA	-2457	-32061	intron_retention	FALSE	canonical	3	27	junction_1	2.5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCCAAGTTTAGTCAA	NA	False	NA	14	True	AATAAA	-28	NA	103915403	103921017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103917947_103918337_103918454_103919150
ES.36010.16	chr9	+	2092	1	NIC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	1094	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGAATTTTGGCCA	NA	False	NA	3	True	AATAAA	-17	NA	103918914	103921006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_103918900_103921000
ES.36010.2	chr9	+	4514	27	NNC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	6.3062850212491	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTTTGGCCAAGTTTA	NA	False	NA	9	True	AATAAA	-23	NA	103879917	103921012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103920357
ES.36010.3	chr9	+	5719	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	180	0	-32	0	multi-exon	FALSE	canonical	3	11	junction_1	5.77333187568024	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCCAAGTTTAGTCAA	NA	False	NA	14	True	AATAAA	-28	NA	103879924	103921017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.4	chr9	+	4091	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	180	1628	-32	86	multi-exon	FALSE	canonical	3	11	junction_1	5.77333187568024	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGTTTTTAAAGAAAATC	NA	False	NA	NA	False	GATAAA	-25	NA	103879924	103919389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.5	chr9	+	5766	29	NNC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	-27	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.09068499408235	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTTGCAGTCTGTAT	NA	False	NA	-68	True	AATAAA	-18	NA	103879929	103920935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103903959_103904038_103906549_103906606_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.6	chr9	+	5733	28	NNC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	-20	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.13787230831544	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAATTTTGGCCAAGTT	NA	False	NA	7	True	AATAAA	-21	NA	103879936	103921010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103906549_103906606_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915656_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.7	chr9	+	5533	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	201	165	-11	-165	multi-exon	FALSE	canonical	3	11	junction_1	5.77333187568024	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGATCTCAATATGTA	NA	False	NA	NA	False	AGTAAA	-21	NA	103879945	103920852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ES.36010.9	chr9	+	5664	27	NNC	ENSMUSG00000032558.20	novel	5899	27	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	7.3983246144375	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTGAATTTTGGCCA	NA	False	NA	3	True	AATAAA	-17	NA	103879958	103921006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915641_103915762_103916532_103916774_103917822_103917947_103918337_103918454_103919150
ES.36011.1	chr9	-	5369	12	FSM	ENSMUSG00000032557.14_ENSMUSG00000103062.2	ENSMUST00000035166.12	2404	12	36	-3001	-35	7	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAATATTTATCAAATCT	NA	False	NA	NA	False	AATAAA	-18	NA	103940297	103920796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.11	chr9	-	5553	13	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	25	-10	intron_retention	FALSE	non_canonical	0	0	junction_2	187.79175449299	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAATGCACCTGCTTT	NA	False	NA	-23	True	AATAAA	-8	NA	103940308	103923807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926879_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592_103937639_103939990
ES.36011.12	chr9	-	1864	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	9	531	9	520	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAATGTCTTCATTGG	NA	False	NA	NA	False	AATAAA	-32	NA	103940324	103924328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.13	chr9	-	7420	10	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	10	491	intron_retention	FALSE	canonical	3	388	junction_1	30.0423569294512	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCAGATAATTCTGG	NA	False	NA	NA	False	AATAAA	-3	NA	103940323	103924357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592
ES.36011.14	chr9	-	5050	11	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	28	491	intron_retention	FALSE	canonical	3	388	junction_1	40.9229764313399	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCAGATAATTCTGG	NA	False	NA	NA	False	AATAAA	-3	NA	103940305	103924357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592_103937639_103939990
ES.36011.15	chr9	-	2910	8	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	5590	560	2918	491	intron_retention	FALSE	canonical	3	388	junction_1	32.9891757139477	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCAGATAATTCTGG	NA	False	NA	NA	False	AATAAA	-3	NA	103934743	103924357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001
ES.36011.16	chr9	-	3706	9	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	16	491	intron_retention	FALSE	canonical	3	388	junction_1	45.7001094090594	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCAGATAATTCTGG	NA	False	NA	NA	False	AATAAA	-3	NA	103940317	103924357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103932474_103933001_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.17	chr9	-	1868	12	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	16	453	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	133.244446956067	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	AATAAA	-29	NA	103940317	103924395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926879_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.18	chr9	-	1508	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	10	886	10	165	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTGGAACTAGTGG	NA	False	NA	-6	True	NA	NA	NA	103940323	103924683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.19	chr9	-	7131	9	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	50	895	-21	156	intron_retention	FALSE	canonical	3	388	junction_1	30.886890422961	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTGTTATGCTGTGTGG	NA	False	NA	-15	True	AATAAA	-37	NA	103940283	103924692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072
ES.36011.2	chr9	-	2722	14	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	22	468	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	152.222586945339	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTCCTTTTTCCTGT	NA	False	NA	NA	False	AAAACA	-29	NA	103940311	103923329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.20	chr9	-	4691	11	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	-21	154	intron_retention	FALSE	canonical	3	388	junction_1	40.9229764313399	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGTTGTTATGCTGTGT	NA	False	NA	-17	True	AATAAA	-35	NA	103940283	103924694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592_103937639_103939990
ES.36011.21	chr9	-	7074	10	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	19	154	intron_retention	FALSE	canonical	3	388	junction_1	30.0423569294512	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGTTGTTATGCTGTGT	NA	False	NA	-17	True	AATAAA	-35	NA	103940314	103924694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592
ES.36011.23	chr9	-	1399	12	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	20	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	135.369833181315	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTTAGTTGGCATGTGTA	NA	False	NA	-42	True	AATAAA	-10	NA	103940313	103924719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937479_103937507_103937592_103937639_103939990
ES.36011.3	chr9	-	2308	14	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	9	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	152.222586945339	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGGCAGTGTTTTATT	NA	False	NA	28	True	NA	NA	NA	103940324	103923756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.4	chr9	-	5494	13	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	27	11	intron_retention	FALSE	non_canonical	0	0	junction_2	158.150486527512	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTAGTGTTACAGGTG	NA	False	NA	-2	True	AATAAA	-29	NA	103940306	103923786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592_103937639_103939990
ES.36011.5	chr9	-	7677	8	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	3165	7	intron_retention	TRUE	non_canonical	0	0	junction_2	208.98012794893	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGATTCTAGTGTTACA	NA	False	NA	-6	True	AATAAA	-25	NA	103934496	103923790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926801_103927033_103930490_103930697_103931658_103932388
ES.36011.6	chr9	-	2407	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	-2	-1	-2	1	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTTTGAGATTCTAGT	NA	False	NA	-12	True	AATAAA	-19	NA	103940335	103923796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ES.36011.7	chr9	-	4677	10	NNC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	468	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	199.545038079683	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTGCTTTGAGATTC	NA	False	NA	-16	True	AATAAA	-15	NA	103937193	103923800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103924188_103924254_103924354_103924414_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931552_103931658_103932388_103932474_103933001_103933089_103934072
ES.36011.9	chr9	-	7950	10	NIC	ENSMUSG00000032557.14	novel	2404	12	NA	NA	34	-6	intron_retention	FALSE	canonical	3	388	junction_1	30.0423569294512	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGCACCTGCTTTGAGA	NA	False	NA	-19	True	AATAAA	-12	NA	103940299	103923803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103937507_103937592
ES.36012.1	chr9	+	3681	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	-307	70	2	-70	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTGTCATTTTATGGT	NA	False	NA	22	True	NA	NA	NA	103940577	104004854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
ES.36013.1	chr9	-	2052	3	NNC	ENSMUSG00000079355.6	novel	2389	3	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAATTTATAATTATC	NA	False	NA	NA	False	AATAAA	-13	NA	103980176	103975347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_103976955_103979477_103979744_103979997
ES.36014.1	chr9	-	2064	1	Antisense	novelGene_ENSMUSG00000090150.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGAGCTGCCCTCAAT	7019	False	NA	NA	False	CATAAA	-33	NA	103995337	103993273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_103993300_103995300
ES.36015.1	chr9	-	2044	1	Intergenic	novelGene_29311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCAGATTATGGTTGCT	3551	False	NA	NA	False	NA	NA	NA	103998805	103996761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_103996800_103998800
ES.36016.1	chr9	-	178	1	Intergenic	novelGene_29312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATAATTATTAAG	NA	False	NA	NA	False	NA	NA	NA	104025140	104024962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104025000_104025100
ES.36017.1	chr9	-	2657	1	Intergenic	novelGene_29313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCACTGCTCTAACTGAA	NA	False	NA	NA	False	NA	NA	NA	104028170	104025513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104025500_104028200
ES.36018.1	chr9	-	8021	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	-6	-3	-6	3	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCCATATCCTTTTT	NA	False	NA	3	True	AATAAA	-19	NA	104140135	104028477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.14	chr9	-	7477	32	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-173	-316	intron_retention	FALSE	canonical	3	156	junction_31	28.3279809679971	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATGTTCTGTAATTT	NA	False	NA	0	True	AATAAA	-26	NA	104080719	104028796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104079150_104080370_104080531_104080613
ES.36018.15	chr9	-	7654	55	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	0	-316	combination_of_known_splicesites	FALSE	canonical	1	2	junction_51	42.2093385151617	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATGTTCTGTAATTT	NA	False	NA	0	True	AATAAA	-26	NA	104140129	104028796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.16	chr9	-	7510	54	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	16	-317	intron_retention	FALSE	canonical	0	0	junction_25	42.2253612426877	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104124010	104028797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067668_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958
ES.36018.18	chr9	-	7339	52	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	7	-317	combination_of_known_splicesites	FALSE	canonical	0	0	junction_51	43.2862666936672	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104140122	104028797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104139897
ES.36018.19	chr9	-	6887	44	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	543	-317	intron_retention	FALSE	canonical	3	149	junction_37	31.1725427295745	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104105649	104028797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104095882_104097069_104097178_104098602_104098703_104105621
ES.36018.20	chr9	-	7753	57	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	5	-317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	49.7775120062324	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104140124	104028797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104079926_104079990_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.23	chr9	-	7667	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-2	-317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	41.9515107737296	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104140104	104028797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074554_104075824_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.26	chr9	-	6234	44	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	520	-318	intron_retention	FALSE	canonical	3	149	junction_36	30.4045554640941	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATGTTCTGTAAT	NA	False	NA	-2	True	AATAAA	-24	NA	104105672	104028798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621
ES.36018.27	chr9	-	8095	33	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-388	-318	intron_retention	TRUE	non_canonical	0	0	junction_30	48.350435866055	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATGTTCTGTAAT	NA	False	NA	-2	True	AATAAA	-24	NA	104080934	104028798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104078387_104078563_104079150_104080370_104080531_104080613
ES.36018.28	chr9	-	4581	2	FSM	ENSMUSG00000032560.15	ENSMUST00000190926.2	453	2	-3461	-667	39	-318	multi-exon	FALSE	canonical	3	278	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATGTTCTGTAAT	NA	False	NA	-2	True	AATAAA	-24	NA	104037769	104028798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104029623_104034012
ES.36018.30	chr9	-	7693	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-11	-318	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_41	41.842072227179	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATGTTCTGTAAT	NA	False	NA	-2	True	AATAAA	-24	NA	104140140	104028798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095737_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.32	chr9	-	7736	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	9	-318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.2038030821155	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTATGTTCTGTAAT	NA	False	NA	-2	True	AATAAA	-24	NA	104140120	104028798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104053014_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.35	chr9	-	7642	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-6	-319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	42.0098532322483	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGTATGTTCTGTAA	NA	False	NA	-3	True	AATAAA	-23	NA	104140108	104028799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051696_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.36	chr9	-	7638	55	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-42	-319	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_50	50.0806208738033	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGTATGTTCTGTAA	NA	False	NA	-3	True	AATAAA	-23	NA	104140171	104028799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108221_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104139897
ES.36018.37	chr9	-	6164	46	ISM	ENSMUSG00000032560.15	ENSMUST00000186788.7	6747	56	18355	-716	521	-319	3prime_fragment	FALSE	canonical	0	0	junction_36	54.1840484931784	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGTATGTTCTGTAA	NA	False	NA	-3	True	AATAAA	-23	NA	104105671	104028799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104087067_104087083_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621
ES.36018.38	chr9	-	7673	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	13	-320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	50.0979404403378	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140116	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044680_104047909_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110932_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.4	chr9	-	7839	57	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-31	-313	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.7717536422947	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTCTGTAATTTTAG	NA	False	NA	3	True	AATAAA	-29	NA	104140160	104028793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104030466_104030576_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.42	chr9	-	5213	36	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-6002	-320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	46.4686332653654	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104086548	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052833_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503
ES.36018.43	chr9	-	4462	29	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-34	-320	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	49.5143248701519	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104077716	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635
ES.36018.46	chr9	-	7616	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	9	-320	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_47	41.1723489012904	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140120	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106174_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.47	chr9	-	7599	55	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-15	-320	combination_of_known_splicesites	FALSE	canonical	1	1	junction_42	42.1301627967891	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140144	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.48	chr9	-	5696	41	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-3	-320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	43.8747079762361	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140105	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104039942_104061757_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.49	chr9	-	6183	45	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	7533	-320	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	59.6890141407186	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	4349	False	NA	-4	True	AATAAA	-22	NA	104098659	104028800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104030466_104030576_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057467_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602
ES.36018.5	chr9	-	7737	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-47	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_55	42.0121037262374	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTTCTGTAATTTT	NA	False	NA	1	True	AATAAA	-27	NA	104140176	104028795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124033_104139897
ES.36018.50	chr9	-	7592	55	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-9	-321	combination_of_known_splicesites	FALSE	canonical	2	5	junction_54	41.7209235220603	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATATGTATGTTCTGT	NA	False	NA	-5	True	AATAAA	-21	NA	104140111	104028801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104139897
ES.36018.55	chr9	-	4328	28	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	3197	-322	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	75.4038964474072	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATATGTATGTTCTG	NA	False	NA	-6	True	AATAAA	-20	NA	104074485	104028802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104073400_104073530_104074357
ES.36018.56	chr9	-	7749	57	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-6	-322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_51	49.7810480237905	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATATGTATGTTCTG	NA	False	NA	-6	True	AATAAA	-20	NA	104140108	104028802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104112279_104112360_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.63	chr9	-	6256	43	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-8	-326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	43.5556307556387	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATGAGATATGTATGT	NA	False	NA	-10	True	AATAAA	-16	NA	104140137	104028806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085115_104107835_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.65	chr9	-	7716	56	NNC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-44	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	50.0995240900509	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAATGAGATATGTAT	NA	False	NA	-12	True	AATAAA	-14	NA	104140173	104028808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059232_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098693_104105617_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.66	chr9	-	2968	3	FSM	ENSMUSG00000032560.15	ENSMUST00000188998.2	614	3	-21	-2333	-21	2333	multi-exon	FALSE	canonical	3	236	junction_2	9.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGGCTCATGTTTGGA	NA	False	NA	NA	False	AATAAA	-29	NA	104042292	104036958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104039613_104039853_104040034_104042158
ES.36018.67	chr9	-	5819	45	ISM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	-1	21051	-1	-7551	5prime_fragment	FALSE	canonical	3	149	junction_26	25.0066106962218	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGACACTGTCATTCAG	NA	False	NA	NA	False	AATATA	-16	NA	104140130	104049531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.68	chr9	-	5143	42	ISM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	20	25456	-7	5296	5prime_fragment	FALSE	canonical	3	149	junction_23	22.5228550720126	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATTTGATGTGGAACAAC	NA	False	NA	NA	False	NA	NA	NA	104140109	104053936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.69	chr9	-	1541	13	ISM	ENSMUSG00000032560.15	ENSMUST00000186788.7	6747	56	38958	35303	-4522	1448	internal_fragment	FALSE	canonical	3	156	junction_11	18.2183896714891	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAAGCCACCTATGA	NA	False	NA	NA	False	NA	NA	NA	104085068	104064818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951
ES.36018.7	chr9	-	7950	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	-253	315	-253	-315	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTTCTGTAATTTT	NA	False	NA	1	True	AATAAA	-27	NA	104140382	104028795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.70	chr9	-	2362	1	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-5508	-1014	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTCACAGATTTTGCC	NA	False	NA	NA	False	NA	NA	NA	104069642	104067280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104067300_104069600
ES.36018.71	chr9	-	3608	22	NNC	ENSMUSG00000032560.15	novel	568	4	NA	NA	13	-9997	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.8856136591427	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCCTCATAATTTGT	NA	False	NA	NA	False	NA	NA	NA	104140116	104083218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_104084226_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104123958_104124040_104139897
ES.36018.72	chr9	-	170	1	Intergenic	novelGene_29314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAAGTTGAAAG	9801	False	NA	NA	False	NA	NA	NA	104093207	104093037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104093000_104093200
ES.36018.73	chr9	-	792	4	FSM	ENSMUSG00000032560.15	ENSMUST00000189299.2	568	4	-20	-204	7	204	multi-exon	FALSE	canonical	3	174	junction_2	8.9566858950296	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATGTCGTCAAACTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	104140122	104114515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104114926_104115663_104115740_104123958_104124040_104139897
ES.36018.9	chr9	-	6801	50	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	-1708	-316	combination_of_known_junctions	FALSE	canonical	2	4	junction_28	51.9493954901795	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATGTTCTGTAATTT	NA	False	NA	0	True	AATAAA	-26	NA	104107900	104028796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104073400_104073530_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839
ES.36019.1	chr9	+	177	1	Intergenic	novelGene_29315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGGAAAAATATGG	NA	False	NA	NA	False	NA	NA	NA	104181254	104181431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_104181300_104181400
ES.3602.1	chr10	+	172	1	Intergenic	novelGene_2752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAATAAATAAA	1642	False	NA	NA	False	NA	NA	NA	93642835	93643007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93642800_93643000
ES.36020.1	chr9	+	178	1	Intergenic	novelGene_29318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATCAATATTTT	NA	False	NA	NA	False	NA	NA	NA	104204608	104204786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_104204600_104204800
ES.36021.1	chr9	-	2997	1	Genic_Genomic	ENSMUSG00000032561.16	novel	NA	NA	NA	NA	10421	443	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGCCTAGGCCTAAGCT	NA	False	NA	NA	False	NA	NA	NA	104168003	104165006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_104165000_104168000
ES.36021.2	chr9	-	4477	11	FSM	ENSMUSG00000032561.16	ENSMUST00000062723.14	4483	11	16	-10	-5	10	multi-exon	TRUE	canonical	0	0	junction_6	1.79164728671689	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAAGCCTGGGTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	104214911	104165439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_104168729_104178014_104178185_104184083_104184188_104186608_104186692_104191506_104191640_104193424_104193518_104197172_104197272_104201250_104201404_104201841_104201929_104204079_104204176_104214741
ES.36021.4	chr9	-	184	1	Intergenic	novelGene_29316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGGATAG	NA	False	NA	NA	False	NA	NA	NA	104190918	104190734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104190700_104190900
ES.36021.5	chr9	-	174	1	Intergenic	novelGene_29317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACAAAACTAAAACT	NA	False	NA	NA	False	NA	NA	NA	104194935	104194761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104194800_104194900
ES.36022.1	chr9	-	653	2	Intergenic	novelGene_29319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTAATGCCACTGTCT	NA	False	NA	NA	False	NA	NA	NA	104274289	104268136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104268336_104273835
ES.36023.1	chr9	+	173	1	Intergenic	novelGene_29320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAATAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	104288775	104288948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_104288800_104288900
ES.36024.1	chr9	+	1557	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	-10	2425	-10	-3	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGGTTGTGAAACAGA	NA	False	NA	17	True	ATTAAA	-14	NA	104930427	104954662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.10	chr9	+	2278	9	FSM	ENSMUSG00000032563.17	ENSMUST00000149243.8	2309	9	31	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	31.1879383736726	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATGTCCTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-2	NA	104930468	104953671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360
ES.36024.11	chr9	+	1902	5	ISM	ENSMUSG00000032563.17	ENSMUST00000149243.8	2309	9	34	13288	3	1048	5prime_fragment	FALSE	canonical	3	494	junction_1	40.5732362524855	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	104930471	104940383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097
ES.36024.13	chr9	+	3926	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	43	3	12	-3	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCCTCATCAAAGATG	NA	False	NA	NA	False	AATAAA	-24	NA	104930480	104957084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.14	chr9	+	1731	11	NNC	ENSMUSG00000032563.17	novel	3972	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	220.574794570912	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGGTTGTGAAACAG	NA	False	NA	16	True	ATTAAA	-13	NA	104930491	104954661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104930712_104931619_104931805_104931922_104932162_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.15	chr9	+	1915	2	Genic_Genomic	ENSMUSG00000032563.17	novel	2309	9	NA	NA	-2690	1011	multi-exon	TRUE	canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104938274	104940346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_104938315_104938471
ES.36024.16	chr9	+	5851	4	ISM	ENSMUSG00000032563.17	ENSMUST00000215577.2	1005	5	1457	20	1457	-2	3prime_fragment	FALSE	canonical	3	540	junction_1	15.2970585407784	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	18	True	ATTAAA	-15	NA	104943460	104954663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.17	chr9	+	7306	2	NIC	ENSMUSG00000032563.17	novel	1005	5	NA	NA	-2013	-6	intron_retention	FALSE	canonical	3	567	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTCTGGTTGTGAAAC	NA	False	NA	14	True	ATTAAA	-11	NA	104946044	104954659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_104951052_104952360
ES.36024.18	chr9	+	6331	2	NNC	ENSMUSG00000032563.17	novel	969	2	NA	NA	237	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	18	True	ATTAAA	-15	NA	104948294	104954663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104953100_104953137
ES.36024.19	chr9	+	3429	2	NIC	ENSMUSG00000032563.17	novel	1005	5	NA	NA	1422	-4	intron_retention	FALSE	canonical	3	576	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGGTTGTGAAACAG	NA	False	NA	16	True	ATTAAA	-13	NA	104949479	104954661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_104952439_104954191
ES.36024.2	chr9	+	3251	10	NNC	ENSMUSG00000032563.17	novel	3972	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	171.847118389473	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTTGTGAAACAGAA	NA	False	NA	18	True	ATTAAA	-15	NA	104930449	104954663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104953100_104953137
ES.36024.20	chr9	+	3122	1	NIC	ENSMUSG00000032563.17	novel	2309	9	NA	NA	2485	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTGTTATGTCCTT	NA	False	NA	NA	False	AATATA	-14	NA	104950542	104953664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_104950500_104953700
ES.36024.3	chr9	+	1620	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	28	2324	-3	80	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGGAGGAGGACTTTT	NA	False	NA	118	True	AATATA	-24	NA	104930465	104954763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.4	chr9	+	9727	3	NNC	ENSMUSG00000032563.17	novel	995	6	NA	NA	-3	1048	intron_retention	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	104930465	104940383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104934748_104934846_104938352_104938443
ES.36024.5	chr9	+	3049	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	29	894	-2	-894	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTCTGTGAAGAGGT	NA	False	NA	NA	False	AATAGA	-9	NA	104930466	104956193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.6	chr9	+	1539	10	NNC	ENSMUSG00000032563.17	novel	3972	10	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	171.847118389473	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGGTTGTGAAACAG	NA	False	NA	16	True	ATTAAA	-13	NA	104930467	104954661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952462_104954191
ES.36024.7	chr9	+	1864	10	NNC	ENSMUSG00000032563.17	novel	3972	10	NA	NA	-1	-377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	171.847118389473	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGTTGTTCCTAACAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	104930467	104953294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104953100_104953137
ES.36024.8	chr9	+	4945	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	30	-1003	-1	1003	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGGTGTTATCTGTG	NA	False	NA	NA	False	AATATA	-26	NA	104930467	104958090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ES.36024.9	chr9	+	7405	4	NNC	ENSMUSG00000032563.17	novel	995	6	NA	NA	-1	1048	intron_retention	FALSE	canonical	0	0	junction_3	263.906970140784	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	104930467	104940383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_104931805_104932793_104932886_104934223_104937918_104938101
ES.36025.1	chr9	-	178	1	Intergenic	novelGene_29321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTCTGCAG	NA	False	NA	NA	False	NA	NA	NA	104980862	104980684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_104980700_104980900
ES.36026.1	chr9	-	1579	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	44	8	0	-8	multi-exon	FALSE	canonical	3	25	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCAGCTGTCTGG	NA	False	NA	NA	False	AGTAAA	-10	NA	105008979	105006538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105007710_105008491_105008762_105008841
ES.36026.2	chr9	-	1294	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	27	310	-17	31	multi-exon	FALSE	canonical	3	25	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAGGCATCTGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	105008996	105006840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105007710_105008491_105008762_105008841
ES.36026.3	chr9	-	2028	2	NIC	ENSMUSG00000032565.10	novel	1631	3	NA	NA	12	-27	intron_retention	FALSE	canonical	3	29	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	105009006	105006898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105008762_105008841
ES.36027.1	chr9	+	2251	5	NNC	ENSMUSG00000032567.17	novel	841	5	NA	NA	-75	-6	intron_retention	FALSE	canonical	0	0	junction_1	25.6551651719493	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTCTGTATTTATT	NA	False	NA	NA	False	AATACA	-10	NA	105272515	105282660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105272583_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.10	chr9	+	3983	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-23	-1205	-23	1205	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	105272567	105284162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.11	chr9	+	2349	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-22	428	-22	2	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTACAGTTCTAGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	105272568	105282529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.12	chr9	+	2467	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-6	294	-6	-3	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTGTATTTATTTAT	NA	False	NA	NA	False	AATACA	-13	NA	105272584	105282663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.13	chr9	+	4377	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-6	-1616	-6	1616	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCAAGTGACCCTTATT	NA	False	NA	NA	False	AATATA	-39	NA	105272584	105284573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.14	chr9	+	2578	6	NIC	ENSMUSG00000032567.17	novel	841	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTACAGTTCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	105272585	105282527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.15	chr9	+	2271	6	NNC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-5	2	intron_retention	FALSE	canonical	1	5	junction_2	23.8947693020879	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTACAGTTCTAGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	105272585	105282529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105272865_105273743_105275058_105278794_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.16	chr9	+	6139	5	NIC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	20	junction_3	19.7405040462497	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTCTGTATTTATT	NA	False	NA	NA	False	AATACA	-10	NA	105272585	105282660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.17	chr9	+	4065	6	NIC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-5	1246	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTTAGATAAGCAGAGT	NA	False	NA	NA	False	AATAAA	-34	NA	105272585	105284203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.18	chr9	+	4841	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	-2	-2084	-2	2084	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTCACCTGAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	105272588	105285041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.19	chr9	+	4125	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	3	-1373	3	1373	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATCTTCAATTAGCATT	NA	False	NA	NA	False	AATAAA	-24	NA	105272593	105284330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.2	chr9	+	2258	6	NNC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.6013513205056	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTACAGTTCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	105272561	105282527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105272865_105273743_105273905_105273996_105275058_105278674_105278882_105280594_105280791_105282197
ES.36027.20	chr9	+	4188	6	NIC	ENSMUSG00000032567.17	novel	1886	6	NA	NA	86	1368	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACATCAATCTTCAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	105272773	105284325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.21	chr9	+	5125	3	NIC	ENSMUSG00000032567.17	novel	1227	4	NA	NA	85	-6	intron_retention	FALSE	canonical	3	32	junction_1	17	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTCTGTATTTATT	NA	False	NA	NA	False	AATACA	-10	NA	105275097	105282660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105278886_105279916_105280791_105282197
ES.36027.22	chr9	+	2722	2	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-136	0	intron_retention	FALSE	canonical	3	66	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105278537	105282666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105280791_105282197
ES.36027.3	chr9	+	2682	5	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-29	0	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272561	105282666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ES.36027.4	chr9	+	2805	6	NIC	ENSMUSG00000032567.17	novel	1886	6	NA	NA	-29	64	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTGTGAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	105272561	105282730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.5	chr9	+	2546	6	NIC	ENSMUSG00000032567.17	novel	809	6	NA	NA	-29	-6	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTCTGTATTTATT	NA	False	NA	NA	False	AATACA	-10	NA	105272561	105282660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.6	chr9	+	3169	5	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	32	junction_3	13.5092560861063	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272563	105282666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105280791_105282197
ES.36027.7	chr9	+	2409	6	NIC	ENSMUSG00000032567.17	novel	841	5	NA	NA	-25	0	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTACAGTTCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	105272565	105282527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36027.8	chr9	+	7607	3	NNC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-24	-21	intron_retention	TRUE	canonical	0	0	junction_2	31.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAAAACAAAATAT	NA	False	NA	NA	False	NA	NA	NA	105272566	105281102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105272865_105273743_105280509_105280558
ES.36027.9	chr9	+	2449	7	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	-24	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	23.2767170270113	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTCTGTATTTATT	NA	False	NA	NA	False	AATACA	-10	NA	105272566	105282660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105272865_105273743_105273905_105273996_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
ES.36028.1	chr9	+	2065	1	Intergenic	novelGene_29322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAAAAGAACCAGATCTT	NA	False	NA	NA	False	NA	NA	NA	105303440	105305505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_105303400_105305500
ES.36029.1	chr9	-	5487	41	Fusion	ENSMUSG00000035032.13_ENSMUSG00000032570.18	novel	4876	28	NA	NA	-3	5	multi-exon	FALSE	canonical	0	0	junction_1	199.134345355089	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTTGGTGTTTTAAAG	NA	False	NA	NA	False	CATAAA	-20	NA	105372279	105039349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_105040447_105081988_105082086_105095749_105095811_105121462_105121624_105164830_105164946_105170854_105170949_105172572_105172693_105175477_105175564_105177260_105177340_105177449_105177600_105190613_105190741_105191885_105191951_105200316_105200436_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.10	chr9	-	4808	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-90	924	-51	1	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372383	105288560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.101	chr9	-	3375	27	NIC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-6	297	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	86.9224642592432	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTATTTGGTTTAGAA	NA	False	NA	-6	True	AATAAA	-16	NA	105372282	105289824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105372091
ES.36029.102	chr9	-	3528	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	3	297	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	86.0908219825414	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTATTTGGTTTAGAA	NA	False	NA	-6	True	AATAAA	-16	NA	105372290	105289824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347273_105347347_105371613_105371797_105372091
ES.36029.103	chr9	-	3522	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-36	297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.3424292521541	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTATTTGGTTTAGAA	NA	False	NA	-6	True	AATAAA	-16	NA	105372368	105289824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300263_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.105	chr9	-	3468	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-5	293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	86.3717362194271	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATTCTATTTGGTTT	NA	False	NA	-10	True	AATAAA	-12	NA	105372337	105289828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371727_105372162
ES.36029.106	chr9	-	3509	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-6	293	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	85.248623721236	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATTCTATTTGGTTT	NA	False	NA	-10	True	AATAAA	-12	NA	105372310	105289828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297425_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.108	chr9	-	3416	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-6	149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	86.2568658924045	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACCTTCTGCACTTAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105372282	105289972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371607_105371797_105372091
ES.36029.109	chr9	-	3126	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-49	147	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_27	84.4565780756414	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCACCTTCTGCACTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	105372381	105289974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372357
ES.36029.110	chr9	-	6709	26	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-1	145	intron_retention	FALSE	canonical	3	363	junction_23	34.8900902836321	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAACCACCTTCTGCACT	NA	False	NA	NA	False	ATTAAA	-18	NA	105372305	105289976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.111	chr9	-	3409	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-107	2340	-68	145	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAACCACCTTCTGCACT	NA	False	NA	NA	False	ATTAAA	-18	NA	105372400	105289976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.112	chr9	-	5720	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-45	145	intron_retention	FALSE	canonical	3	363	junction_24	34.4740919786364	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAACCACCTTCTGCACT	NA	False	NA	NA	False	ATTAAA	-18	NA	105372377	105289976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.114	chr9	-	3498	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-49	1427	-49	138	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACCTGAACCACCTT	NA	False	NA	NA	False	ATTAAA	-11	NA	105372381	105289983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.115	chr9	-	4973	18	NIC	ENSMUSG00000032570.18	novel	4665	27	NA	NA	7384	76	intron_retention	FALSE	canonical	3	384	junction_8	35.8049309395337	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTTTGCAATTGAGTG	NA	False	NA	NA	False	AATGAA	-38	NA	105330845	105290045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732
ES.36029.116	chr9	-	3403	28	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-5	76	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	86.4519340435067	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTTTGCAATTGAGTG	NA	False	NA	NA	False	AATGAA	-38	NA	105372337	105290045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105328991_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.117	chr9	-	2605	22	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	42	11410	3	0	5prime_fragment	FALSE	canonical	3	363	junction_18	29.8007746174567	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTGTCACATTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	105372290	105299966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.118	chr9	-	3969	20	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-5	18427	-5	5396	5prime_fragment	FALSE	canonical	3	363	junction_16	31.2852128478661	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAATTAAAGTCACACC	NA	False	NA	NA	False	NA	NA	NA	105372337	105306983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.119	chr9	-	2966	21	NNC	ENSMUSG00000032570.18	novel	1072	12	NA	NA	-9	5396	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.0686593994046	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAATTAAAGTCACACC	NA	False	NA	NA	False	NA	NA	NA	105372255	105306983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105307773_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.12	chr9	-	4726	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-37	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	86.9224642592432	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372369	105288560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105372091
ES.36029.120	chr9	-	4658	6	NIC	ENSMUSG00000032570.18	novel	1082	10	NA	NA	5	-5	intron_retention	FALSE	canonical	3	389	junction_4	20.6784912409005	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTTTAAAAGATAT	NA	False	NA	NA	False	AATAAA	-10	NA	105372299	105330685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105347347_105371613
ES.36029.122	chr9	-	1348	3	ISM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-43	57909	-43	-160	5prime_fragment	FALSE	canonical	3	385	junction_2	26	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCACCT	NA	False	NA	NA	False	NA	NA	NA	105372375	105346465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_105347347_105371613_105371797_105372091
ES.36029.123	chr9	-	1268	1	NIC	ENSMUSG00000032570.18	novel	939	10	NA	NA	-40	-24799	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCCAAAAACAAAAAACCCTA	NA	False	NA	NA	False	NA	NA	NA	105372372	105371104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105371100_105372400
ES.36029.13	chr9	-	4811	27	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.0990566747582	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372308	105288560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105308679_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.16	chr9	-	4996	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-49	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	112.709187599715	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372381	105288560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345124_105345200_105347235_105347347_105371613_105371797_105372091
ES.36029.18	chr9	-	4923	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	113.687838198216	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372354	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312442_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330882_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.19	chr9	-	4345	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	84.2293016420179	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372382	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105289688_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.2	chr9	-	5760	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	31	-915	3	-5	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGGTGTGTGTACAT	NA	False	NA	NA	False	AATAAA	-11	NA	105372301	105287641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.20	chr9	-	4727	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	153	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	86.3717362194271	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372093	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105371996
ES.36029.21	chr9	-	4993	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_26	111.002269465676	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372379	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347118_105347235_105347347_105371613_105371797_105372091
ES.36029.23	chr9	-	5534	8	NIC	ENSMUSG00000032570.18	novel	4665	27	NA	NA	28	0	intron_retention	FALSE	canonical	3	400	junction_3	35.5785993919642	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105309906	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852
ES.36029.24	chr9	-	6066	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-6	0	intron_retention	FALSE	canonical	3	363	junction_23	33.4954072626727	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372252	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.25	chr9	-	5047	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	112.612908193673	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372281	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105366027_105366255_105371613_105371797_105372091
ES.36029.26	chr9	-	4750	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	85.8314796529122	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105372280	105288561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.28	chr9	-	4837	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	86.4476974220526	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAATGACTTCCCAGTT	NA	False	NA	-4	True	AATAAA	-18	NA	105372280	105288563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320075_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.3	chr9	-	5539	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-8	-26	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	108.516040927348	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAATAAATTATCTAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	105372254	105287662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347273_105347347_105371613_105371682_105372091
ES.36029.30	chr9	-	4668	27	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	87.6335160546162	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCACTAATGACTTCC	NA	False	NA	-9	True	AATAAA	-13	NA	105371879	105288568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347273_105347347_105371613
ES.36029.31	chr9	-	4477	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	22	377	-6	-372	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGTGCTGTCATTGA	NA	False	NA	NA	False	NA	NA	NA	105372310	105288933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.32	chr9	-	4374	5	ISM	ENSMUSG00000032570.18	ENSMUST00000112557.9	1514	12	13810	-1128	-4519	-432	intron_retention	FALSE	canonical	3	400	junction_3	36.7457480533463	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTGTCAGGATTAATA	NA	False	NA	NA	False	AATAAA	-21	NA	105299973	105288993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380
ES.36029.33	chr9	-	4490	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	3	-434	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	112.215825896496	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAACCTGTCAGGATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	105372290	105288995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345860_105345956_105347235_105347347_105371613_105371797_105372091
ES.36029.35	chr9	-	4275	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-9	1376	2	-451	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTGTTTTGTATTTTA	NA	False	NA	NA	False	AATAAA	-2	NA	105372302	105289012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.36	chr9	-	4205	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-6	-461	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	86.9224642592432	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAAGGTAAGTGTT	NA	False	NA	NA	False	TATAAA	-8	NA	105372310	105289022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105372091
ES.36029.37	chr9	-	4054	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-88	1676	-49	-751	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATCTGTATTTTTAAGT	NA	False	NA	NA	False	TATAAA	-40	NA	105372381	105289312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.38	chr9	-	4162	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-50	764	-50	-759	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTTCATATCTGTAT	NA	False	NA	NA	False	TATAAA	-32	NA	105372382	105289320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.39	chr9	-	4187	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-15	-774	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_26	111.002269465676	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTGACCTTTATTACT	NA	False	NA	NA	False	TATAAA	-17	NA	105372347	105289335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347118_105347235_105347347_105371613_105371797_105372091
ES.36029.4	chr9	-	4413	10	NIC	ENSMUSG00000032570.18	novel	1514	12	NA	NA	1505	4	intron_retention	FALSE	canonical	3	384	junction_9	36.5239647354993	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCAGTTAGTATTGTTAA	NA	False	NA	7	True	AATAAA	-29	NA	105312278	105288552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250
ES.36029.40	chr9	-	4154	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-2	-776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	112.832954008145	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATTGACCTTTATTA	NA	False	NA	NA	False	TATAAA	-15	NA	105372306	105289337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345860_105345946_105347235_105347347_105371613_105371797_105372091
ES.36029.42	chr9	-	6303	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-29	744	intron_retention	FALSE	canonical	3	363	junction_24	34.4740919786364	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTCATTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	105372361	105289377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.45	chr9	-	4045	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-25	740	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.4863930895618	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCATTTTGTCATTTCT	NA	False	NA	NA	False	TTTAAA	-45	NA	105372357	105289381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291863_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.46	chr9	-	6026	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-6	535	intron_retention	FALSE	canonical	0	0	junction_17	88.0681218310022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372282	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105328991_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.47	chr9	-	6124	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-59	535	intron_retention	FALSE	canonical	3	363	junction_24	34.4740919786364	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372391	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.48	chr9	-	3904	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-58	1030	-58	535	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372390	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.49	chr9	-	3632	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-40	535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.864169529774	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372372	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105309920_105312285_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.5	chr9	-	9520	22	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	367	0	intron_retention	FALSE	canonical	3	363	junction_21	35.953169338565	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCCAGTTAGTATTG	NA	False	NA	3	True	AATAAA	-25	NA	105347222	105288556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295891_105297380_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899
ES.36029.50	chr9	-	3804	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-7	535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	86.4476974220526	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372311	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330753_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.51	chr9	-	6374	26	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	8	535	intron_retention	FALSE	canonical	3	363	junction_22	34.0915473394799	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372285	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.52	chr9	-	3790	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-98	1950	-59	535	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372391	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.53	chr9	-	5190	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	3	535	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	85.5701286289804	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372301	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345860_105347347_105371613_105371797_105372091
ES.36029.55	chr9	-	3896	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-3	535	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_26	111.002269465676	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372307	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347118_105347235_105347347_105371613_105371797_105372091
ES.36029.56	chr9	-	3708	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	1	535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	108.560553102802	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372303	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371607_105371682_105372091
ES.36029.57	chr9	-	3757	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-28	535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.2283948407806	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372360	105289586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295797_105297403_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.58	chr9	-	3966	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-48	532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	134.026307195297	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372380	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329084_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345005_105347035_105347118_105347235_105347347_105371613_105371797_105372091
ES.36029.59	chr9	-	7838	25	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	14	532	intron_retention	FALSE	canonical	3	363	junction_21	34.5461647654266	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372262	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.6	chr9	-	4933	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-59	2	-59	-2	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTTCCCAGTTAGTAT	NA	False	NA	1	True	AATAAA	-23	NA	105372391	105288558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.60	chr9	-	3954	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-52	532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	111.378331164824	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372384	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347102_105347235_105347347_105371613_105371797_105372091
ES.36029.62	chr9	-	5063	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-1	532	intron_retention	FALSE	canonical	3	363	junction_23	33.4954072626727	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372277	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.64	chr9	-	3998	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-60	532	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_25	112.215825896496	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372392	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345860_105345956_105347235_105347347_105371613_105371797_105372091
ES.36029.65	chr9	-	3975	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-47	532	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	112.567032183912	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTGTTTTTTGGTTT	NA	False	NA	-14	True	AGTAAA	-24	NA	105372379	105289589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105327892_105327978_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.68	chr9	-	3634	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	10	531	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	84.4043872776527	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTTGTTTTTTGGTT	NA	False	NA	-15	True	AGTAAA	-23	NA	105372266	105289590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.7	chr9	-	4551	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-59	2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_27	84.4565780756414	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACTTCCCAGTTAGTA	NA	False	NA	0	True	AATAAA	-22	NA	105372391	105288559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372357
ES.36029.71	chr9	-	1830	10	NIC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	11	531	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	175.630574688555	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTTGTTTTTTGGTT	NA	False	NA	-15	True	AGTAAA	-23	NA	105372265	105289590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105371613_105371682_105372091
ES.36029.73	chr9	-	3608	27	NIC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-6	530	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	86.9224642592432	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGGTTGTTTTTTGGT	NA	False	NA	-16	True	AGTAAA	-22	NA	105372282	105289591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105372091
ES.36029.75	chr9	-	3793	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	5	528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	86.4382713845269	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAATGGTTGTTTTTTG	NA	False	NA	-18	True	AGTAAA	-20	NA	105372288	105289593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345011_105347231_105347347_105371613_105371797_105372091
ES.36029.77	chr9	-	3201	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	4	526	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	84.2293016420179	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAAATGGTTGTTTTT	NA	False	NA	-20	True	AGTAAA	-18	NA	105372272	105289595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105289688_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.79	chr9	-	3514	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-59	525	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_27	84.4565780756414	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTAAATGGTTGTTTT	NA	False	NA	-21	True	AGTAAA	-17	NA	105372391	105289596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372357
ES.36029.8	chr9	-	7141	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-50	1	intron_retention	FALSE	canonical	3	363	junction_24	34.4740919786364	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGACTTCCCAGTTAGT	NA	False	NA	-1	True	AATAAA	-21	NA	105372382	105288560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.80	chr9	-	3735	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-40	523	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	84.9119216528251	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGTAAATGGTTGTT	NA	False	NA	-23	True	AGTAAA	-15	NA	105372372	105289598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091_105372185_105372323
ES.36029.81	chr9	-	3611	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-2	521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	147.202118357156	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAGTGTAAATGGTTG	NA	False	NA	-25	True	AGTAAA	-13	NA	105372306	105289600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295833_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105345860_105345956_105347235_105347347_105371613_105371682_105372091
ES.36029.82	chr9	-	3685	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	156	521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	86.3717362194271	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAGTGTAAATGGTTG	NA	False	NA	-25	True	AGTAAA	-13	NA	105372090	105289600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105371996
ES.36029.83	chr9	-	3708	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-51	521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	113.552289492461	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAGTGTAAATGGTTG	NA	False	NA	-25	True	AGTAAA	-13	NA	105372383	105289600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329038_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091_105372185_105372323
ES.36029.84	chr9	-	3736	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	2	521	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	86.0908219825414	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAGTGTAAATGGTTG	NA	False	NA	-25	True	AGTAAA	-13	NA	105372274	105289600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347273_105347347_105371613_105371797_105372091
ES.36029.85	chr9	-	3710	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	-58	1224	-58	341	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCGTGCTTCCTTTTTCC	NA	False	NA	38	True	NA	NA	NA	105372390	105289780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.86	chr9	-	3606	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-110	2146	-71	339	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCGTGCTTCCTTTTT	NA	False	NA	36	True	TTTAAA	-44	NA	105372403	105289782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ES.36029.88	chr9	-	5888	27	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-58	300	intron_retention	FALSE	canonical	3	363	junction_24	34.4740919786364	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGGTTTAGAAATT	NA	False	NA	-3	True	AATAAA	-19	NA	105372390	105289821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.89	chr9	-	3853	28	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-49	300	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_25	83.4933278919288	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGGTTTAGAAATT	NA	False	NA	-3	True	AATAAA	-19	NA	105372381	105289821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347347_105371613_105371797_105372091
ES.36029.90	chr9	-	3325	27	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	99	300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	87.580402619975	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGGTTTAGAAATT	NA	False	NA	-3	True	AATAAA	-19	NA	105371764	105289821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344912_105345017_105347235_105347347_105371613
ES.36029.91	chr9	-	3447	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-58	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	84.9119216528251	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105372390	105289822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091_105372137_105372357
ES.36029.92	chr9	-	1552	10	NIC	ENSMUSG00000032570.18	novel	1514	12	NA	NA	1435	299	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	141.533663055041	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105312348	105289822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105312250
ES.36029.93	chr9	-	3601	30	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-51	299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	130.414750447807	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105372383	105289822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347118_105347235_105347347_105371613_105371797_105372091_105372195_105372329
ES.36029.94	chr9	-	3728	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-52	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	113.255242704256	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105372384	105289822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105339276_105339343_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ES.36029.95	chr9	-	8415	25	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-11	299	intron_retention	FALSE	canonical	3	363	junction_22	34.7938123090874	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105372343	105289822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105347347_105371613_105371797_105372091
ES.36029.96	chr9	-	3270	28	NNC	ENSMUSG00000032570.18	novel	5642	28	NA	NA	-42	298	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_27	84.4565780756414	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTATTTGGTTTAGAAA	NA	False	NA	-5	True	AATAAA	-17	NA	105372374	105289823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372357
ES.36029.97	chr9	-	3440	25	NNC	ENSMUSG00000032570.18	novel	4665	27	NA	NA	2289	298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	91.2974382018588	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTATTTGGTTTAGAAA	NA	False	NA	-5	True	AATAAA	-17	NA	105345300	105289823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341943_105343781_105343872_105344899
ES.36029.98	chr9	-	3671	29	NNC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	-3	298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	111.378331164824	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTATTTGGTTTAGAAA	NA	False	NA	-5	True	AATAAA	-17	NA	105372335	105289823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347042_105347102_105347235_105347347_105371613_105371797_105372091
ES.3603.1	chr10	+	3874	8	NNC	ENSMUSG00000020020.9	novel	2946	4	NA	NA	-11561	2650	intron_retention	FALSE	non_canonical	0	0	junction_7	9.00566714998542	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACCTTCCTCAACTAT	NA	False	NA	NA	False	TTTAAA	-32	NA	93655855	93696600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93655924_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590_93695284_93696576
ES.3603.10	chr10	+	4016	8	NNC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	22	1332	intron_retention	FALSE	canonical	1	1	junction_1	8.98979012717273	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669701	93695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93669754_93669871_93670055_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.11	chr10	+	3049	3	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	35	8	intron_retention	FALSE	canonical	3	11	junction_1	6.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTAATCCTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	93669714	93684408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93669754_93679839_93679914_93681472
ES.3603.12	chr10	+	3676	6	NIC	ENSMUSG00000020020.9	novel	2946	4	NA	NA	8957	24	intron_retention	FALSE	canonical	3	14	junction_4	3.48711915483254	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATAGGCCAACTAAACT	NA	False	NA	NA	False	TATAAA	-13	NA	93678636	93693974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.13	chr10	+	2513	6	NNC	ENSMUSG00000020020.9	novel	2946	4	NA	NA	10167	50	intron_retention	FALSE	canonical	0	0	junction_1	8	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTGAGTTTTATAC	1115	False	NA	NA	False	TATAAA	-39	NA	93679846	93694000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93679935_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.14	chr10	+	5453	5	ISM	ENSMUSG00000020020.9	ENSMUST00000216224.2	2449	6	11969	-3254	11969	3254	3prime_fragment	FALSE	canonical	3	14	junction_3	3.11247489949718	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTTTAATAGTCATCT	2917	False	NA	NA	False	AATAAA	-21	NA	93681648	93697204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.15	chr10	+	2870	2	ISM	ENSMUSG00000020020.9	ENSMUST00000216224.2	2449	6	12315	6051	12315	3499	internal_fragment	FALSE	canonical	3	22	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTCCATTTCTCACT	3263	False	NA	NA	False	ATTAAA	-18	NA	93681994	93687899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93682977_93686011
ES.3603.16	chr10	+	2592	2	NNC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	18969	-2503	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACGTGTCCCTTTCAT	6167	False	NA	NA	False	AATAAA	-20	NA	93688648	93691447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93688818_93689024
ES.3603.2	chr10	+	135	1	Intergenic	novelGene_2753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93664821	93664956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93664800_93665000
ES.3603.3	chr10	+	3822	6	FSM	ENSMUSG00000020020.9	ENSMUST00000216224.2	2449	6	-36	-1337	-36	1337	multi-exon	FALSE	canonical	0	0	junction_1	8	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCTAGCCTTTAATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	93669643	93695287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93669754_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.4	chr10	+	2607	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-36	48	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATATTTTGAGTTTTAT	NA	False	NA	NA	False	TATAAA	-37	NA	93669643	93693998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.5	chr10	+	3894	8	NNC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-18	19226	intron_retention	FALSE	canonical	0	0	junction_7	7.68513008932158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAGGAGACAAAGTACTG	NA	False	NA	NA	False	TATAAA	-39	NA	93669661	93713176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590_93695275_93713147
ES.3603.6	chr10	+	3870	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-15	1332	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669664	93695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.7	chr10	+	3898	7	NNC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-15	1339	intron_retention	FALSE	canonical	0	0	junction_2	7.4535599249993	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAGCCTTTAATTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	93669664	93695289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93669754_93679839_93679935_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.8	chr10	+	3979	8	NNC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	-6	1332	intron_retention	FALSE	canonical	0	0	junction_2	9.20736173961258	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669673	93695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93669754_93669871_93669990_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.3603.9	chr10	+	3706	8	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	8	1332	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	7.68513008932158	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669687	93695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93669754_93679839_93679914_93681472_93682317_93682457_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
ES.36030.1	chr9	+	158	1	Intergenic	novelGene_29323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105384757	105384915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_105384800_105384900
ES.36031.1	chr9	+	173	1	Intergenic	novelGene_29324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTAAGACAAAATC	NA	False	NA	NA	False	NA	NA	NA	105423080	105423253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_105423100_105423300
ES.36032.1	chr9	-	1807	6	Intergenic	novelGene_29325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCCTTTCCAGTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	105498867	105456075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_105457185_105458894_105459064_105466551_105466747_105474738_105474787_105482593_105482721_105498708
ES.36033.1	chr9	+	6521	13	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-22	193	intron_retention	FALSE	canonical	3	118	junction_2	13.1748392357891	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCCAGTTTACCCTGC	NA	False	NA	NA	False	NA	NA	NA	105520154	105556712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105547156_105549842_105550009_105553941_105554107_105555307
ES.36033.11	chr9	+	4864	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	36.289845805504	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520196	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.12	chr9	+	4898	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	36.3727242484266	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520196	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540469_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.14	chr9	+	4155	18	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	49.4413076948253	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520196	105564848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.18	chr9	+	5063	15	FSM	ENSMUSG00000032571.15	ENSMUST00000187573.7	4929	15	22	-156	-8	156	multi-exon	FALSE	canonical	3	108	junction_1	14.1767271200632	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105520198	105556675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307
ES.36033.19	chr9	+	5085	15	NNC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-6	156	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	33.9357887060555	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105520200	105556675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540469_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307
ES.36033.2	chr9	+	4917	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	-209	3	-17	-3	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGGATTTTTTTGGA	NA	False	NA	29	True	AGTAAA	-20	NA	105520159	105564853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.20	chr9	+	7546	19	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-5	-1	intron_retention	FALSE	canonical	1	3	junction_14	36.7768126761589	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520201	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.21	chr9	+	4901	20	FSM	ENSMUSG00000032571.15	ENSMUST00000191268.7	4756	20	-27	-118	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5737870553956	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520201	105564848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_105520621_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.22	chr9	+	5616	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.8515777296364	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520204	105564848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105556269_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.23	chr9	+	4689	19	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.8825753499087	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCCTGAGAGTTGGGA	NA	False	NA	19	True	AGTAAA	-10	NA	105520205	105564843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522171_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.24	chr9	+	4993	19	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-1	-6	intron_retention	FALSE	canonical	1	1	junction_11	46.196741106802	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCATCCTGAGAGTTGGG	NA	False	NA	18	True	AGTAAA	-9	NA	105520205	105564842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546924_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563654_105564313
ES.36033.25	chr9	+	4494	20	NNC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	46.6535530974919	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGAGTTGGGATTTTTTT	NA	False	NA	26	True	AGTAAA	-17	NA	105520206	105564850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563342_105563422_105563544_105563654_105564313
ES.36033.26	chr9	+	4417	20	NNC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	46.6493966197436	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTGAGAGTTGGGATT	NA	False	NA	21	True	AGTAAA	-12	NA	105520207	105564845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105547025_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.28	chr9	+	5526	18	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	1	-23	intron_retention	FALSE	canonical	1	3	junction_14	36.6091296496164	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTAAACTCTTATTCAA	NA	False	NA	1	True	TATAAA	-13	NA	105520207	105564825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563654_105564313
ES.36033.29	chr9	+	4927	20	NNC	ENSMUSG00000032571.15	novel	4756	20	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5737870553956	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGAGAGTTGGGATTT	NA	False	NA	22	True	AGTAAA	-13	NA	105520207	105564846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520655_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.3	chr9	+	4824	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	37.7529511238467	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGAGTTGGGATTTTTT	NA	False	NA	25	True	AGTAAA	-16	NA	105520167	105564849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105547025_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.30	chr9	+	4843	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	38.0263795300868	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520209	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553959_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.31	chr9	+	5579	19	NIC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	7	-1	intron_retention	FALSE	canonical	3	108	junction_1	21.4801085129567	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520220	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.33	chr9	+	4956	19	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	-2	-2	intron_retention	FALSE	canonical	1	3	junction_15	35.6327720566958	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTGAGAGTTGGGATTT	NA	False	NA	22	True	AGTAAA	-13	NA	105520226	105564846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563654_105564313
ES.36033.34	chr9	+	4774	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	46.8460672481746	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520240	105564848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540469_105544930_105545133_105546184_105546373_105547025_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.36	chr9	+	3564	16	NIC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	7248	-1	intron_retention	FALSE	canonical	3	121	junction_2	18.9180689641764	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105527647	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563654_105564313
ES.36033.37	chr9	+	5913	9	ISM	ENSMUSG00000032571.15	ENSMUST00000187573.7	4929	15	12389	-193	-3022	193	3prime_fragment	FALSE	canonical	3	121	junction_4	12.4373429638327	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCCAGTTTACCCTGC	NA	False	NA	NA	False	NA	NA	NA	105532565	105556712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307
ES.36033.38	chr9	+	2652	14	ISM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	15230	9	11	-1	3prime_fragment	FALSE	canonical	3	121	junction_4	18.906809768475	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105535598	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.39	chr9	+	3589	3	ISM	ENSMUSG00000032571.15	ENSMUST00000187573.7	4929	15	27812	-192	9627	192	3prime_fragment	FALSE	canonical	3	140	junction_1	1.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTCCAGTTTACCCTG	NA	False	NA	NA	False	NA	NA	NA	105547988	105556711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_105550009_105553941_105554107_105555307
ES.36033.4	chr9	+	4541	20	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.7025259626095	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTGGGATTTTTTTGG	NA	False	NA	28	True	AGTAAA	-19	NA	105520171	105564852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.40	chr9	+	1870	1	Intergenic	novelGene_29326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105550932	105552802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_105550900_105552800
ES.36033.41	chr9	+	1877	2	ISM	ENSMUSG00000032571.15	ENSMUST00000187573.7	4929	15	33421	-156	-5311	156	3prime_fragment	FALSE	canonical	3	143	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105553597	105556675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_105554107_105555307
ES.36033.42	chr9	+	2767	2	NNC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-5023	193	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCCAGTTTACCCTGC	NA	False	NA	NA	False	NA	NA	NA	105553885	105556712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105554675_105554734
ES.36033.5	chr9	+	3598	11	ISM	ENSMUSG00000032571.15	ENSMUST00000187573.7	4929	15	5	9719	2	602	5prime_fragment	FALSE	canonical	3	108	junction_1	13.0019229347047	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTTGAAATCCCACTTA	NA	False	NA	NA	False	TTTAAA	-15	NA	105520181	105546800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184
ES.36033.6	chr9	+	5695	19	NIC	ENSMUSG00000032571.15	novel	4756	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	118	junction_2	20.5297886550793	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520181	105564848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.7	chr9	+	4836	20	NNC	ENSMUSG00000032571.15	novel	4711	20	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.7232080635004	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520184	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531246_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559393_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36033.9	chr9	+	4339	19	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	47.2662539813776	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGAGTTGGGATTTT	NA	False	NA	23	True	AGTAAA	-14	NA	105520194	105564847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ES.36034.1	chr9	-	979	4	NNC	ENSMUSG00000043719.15	novel	8781	37	NA	NA	93780	-19524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTTCATTATCCTG	NA	False	NA	NA	False	AATACA	-28	NA	105593067	105586139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105586791_105592373_105592411_105592520_105592557_105592812
ES.36035.1	chr9	-	4267	25	NNC	ENSMUSG00000091345.10	novel	9289	41	NA	NA	-33551	-858	intron_retention	FALSE	non_canonical	0	0	junction_1	0.438985573035531	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTCTTTTTTTTTTC	NA	False	NA	NA	False	AGTAAA	-23	NA	105792556	105734134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105734537_105739028_105739262_105739947_105740045_105741344_105742035_105752987_105753197_105755748_105755840_105758621_105759279_105759792_105759887_105766086_105766582_105769321_105769363_105769467_105769504_105772440_105772504_105774178_105774242_105775920_105775957_105776057_105776109_105778813_105778877_105780690_105780754_105781703_105781767_105783262_105783320_105784320_105784361_105787844_105788361_105789653_105789717_105792192_105792247_105792337_105792383_105792511
ES.36036.1	chr9	-	6848	35	NNC	ENSMUSG00000032572.10	novel	7371	38	NA	NA	-7831	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	0.404344914260809	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGCTCTTGGAGAAC	3243	False	NA	NA	False	ATTAAA	-21	NA	105957439	105867663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_105868034_105873119_105873332_105874323_105874421_105877410_105878095_105880377_105880469_105890502_105890997_105893694_105893732_105895052_105895089_105896602_105896666_105897800_105897864_105897964_105898001_105900072_105900124_105902689_105902753_105903655_105903718_105905388_105905452_105907165_105907229_105910954_105910991_105911127_105911182_105917770_105917837_105918290_105918354_105921423_105921478_105924913_105924959_105927030_105927058_105928831_105928904_105934579_105934634_105937239_105937333_105937522_105937669_105938680_105938760_105939971_105940307_105943850_105944406_105945045_105945592_105949112_105949758_105952020_105952630_105954070_105954659_105957143
ES.36037.1	chr9	+	192	1	Intergenic	novelGene_29327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTTATTTTTAACTA	NA	False	NA	NA	False	TTTAAA	-7	NA	106009116	106009308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106009100_106009300
ES.36038.1	chr9	-	5965	4	FSM	ENSMUSG00000020258.17	ENSMUST00000036382.13	4209	4	-1753	-3	-1733	3	multi-exon	FALSE	canonical	2	8	junction_1	3.55902608401044	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTACTAATTAT	3722	False	NA	0	True	AATAAA	-24	NA	106037070	106030052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687
ES.36038.2	chr9	-	4050	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-2014	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	3.53553390593274	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATGTGTCTTACTAA	3441	False	NA	-4	True	AATAAA	-20	NA	106037351	106030056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295
ES.36038.4	chr9	-	4134	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1992	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.67340285895511	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCACATGTGTCTTAC	3463	False	NA	-7	True	AATAAA	-17	NA	106037329	106030059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106033784_106034234_106034496_106034687_106035104_106037295
ES.36038.5	chr9	-	4063	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1745	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.67340285895511	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCACATGTGTCTTAC	3710	False	NA	-7	True	AATAAA	-17	NA	106037082	106030059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037010
ES.36038.7	chr9	-	4574	4	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1985	4	intron_retention	FALSE	canonical	2	7	junction_3	4.02768199119819	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTATATGCACATGTGTC	3470	False	NA	-11	True	AATAAA	-13	NA	106037322	106030063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106034496_106034687_106035104_106037295
ES.36038.8	chr9	-	3815	7	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-4178	-507	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	5.13160143944688	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGAGCTCAATAGGACT	1277	False	NA	NA	False	AATAAA	-13	NA	106039515	106030574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295_106037434_106038130_106038227_106039410
ES.36038.9	chr9	-	1999	5	NNC	ENSMUSG00000020258.17	novel	4081	5	NA	NA	-1986	667	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	3.53553390593274	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATCTCCCCTCAGCAC	3469	False	NA	NA	False	AATAAA	-25	NA	106037323	106032079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106037295
ES.36039.1	chr9	-	180	1	Intergenic	novelGene_29328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	106043766	106043586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106043600_106043800
ES.3604.1	chr10	+	151	1	Intergenic	novelGene_2755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGATATATAAGCC	NA	False	NA	NA	False	NA	NA	NA	93717620	93717771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93717600_93717800
ES.36040.1	chr9	+	179	1	Intergenic	novelGene_29329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106045939	106046118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106045900_106046100
ES.36041.1	chr9	-	180	1	Intergenic	novelGene_29330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAAAACTATA	NA	False	NA	NA	False	NA	NA	NA	106046396	106046216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106046200_106046400
ES.36042.1	chr9	+	3795	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-48	0	-48	0	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048078	106068338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.10	chr9	+	4137	7	NNC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	115.038278653479	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048128	106068338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106062144_106062447_106062518_106063568_106063712_106065794
ES.36042.11	chr9	+	3510	10	NNC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	6	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.5858254452343	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTCGTAAACAGGATTT	NA	False	NA	20	True	TATAAA	-17	NA	106048133	106068304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794_106067214_106067409
ES.36042.12	chr9	+	3457	7	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	7	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	115.038278653479	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGGATTTTATGGTTT	NA	False	NA	28	True	TATAAA	-25	NA	106048134	106068312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106062447_106062518_106063568_106063712_106065794
ES.36042.13	chr9	+	2245	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	7	1080	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTGTCTCTCATCTA	NA	False	NA	NA	False	AATACA	-31	NA	106048134	106066944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.14	chr9	+	3505	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	8	234	7	-234	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGCTTATGAAGGAA	NA	False	NA	36	True	AATAAA	-22	NA	106048134	106068104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.15	chr9	+	3890	10	NNC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	7	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.521404774093	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTTTACAGTCTCT	NA	False	NA	37	True	TATAAA	-34	NA	106048134	106068321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106048579_106053811_106053910_106055076_106055261_106057407_106057492_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.16	chr9	+	3736	9	NNC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	7	-33	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	84.8760125123701	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106048134	106068305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061851_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.17	chr9	+	3990	7	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	7	-35	intron_retention	FALSE	canonical	3	45	junction_3	82.2261448013276	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGTCGTAAACAGGATT	NA	False	NA	19	True	TATAAA	-16	NA	106048134	106068303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.18	chr9	+	3397	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	11	-238	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATTAGTGCTTATGAA	NA	False	NA	32	True	AATAAA	-18	NA	106048138	106068100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.19	chr9	+	5472	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	18	1844	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCCTACT	NA	False	NA	NA	False	ATTAAA	-12	NA	106048145	106070182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.2	chr9	+	3683	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-42	106	-42	-106	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGTTATTCTACTGTA	NA	False	NA	3	True	CATAAA	-14	NA	106048084	106068232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.20	chr9	+	4598	7	ISM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	7996	241	2247	-241	3prime_fragment	FALSE	canonical	3	208	junction_1	25.660713595343	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGACAATTAGTGCTTAT	NA	False	NA	29	True	AATAAA	-15	NA	106056122	106068097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.21	chr9	+	3331	6	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	2247	1066	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	87.230728530719	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACATACGTGTATATGC	NA	False	NA	NA	False	AATACA	-17	NA	106056122	106066930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.22	chr9	+	3755	6	ISM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	12030	33	6281	-33	3prime_fragment	FALSE	canonical	3	211	junction_1	21.5536539825618	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCGTAAACAGGATTTT	NA	False	NA	21	True	TATAAA	-18	NA	106060156	106068305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.23	chr9	+	3503	5	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	6952	0	intron_retention	FALSE	canonical	3	211	junction_1	24.0883789408918	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106060827	106068338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106060915_106061378_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.3	chr9	+	3688	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048085	106068338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.4	chr9	+	2383	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-31	1395	-31	1079	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCCTGTCTCTCATCT	NA	False	NA	NA	False	AATACA	-30	NA	106048095	106066943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.5	chr9	+	5635	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-31	-1857	-31	1857	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACTGCAGCTACACTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	106048095	106070195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36042.6	chr9	+	5580	10	NNC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	-31	1857	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	81.5858254452343	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACTGCAGCTACACTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	106048095	106070195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794_106068857_106068911
ES.36042.7	chr9	+	4065	7	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	-27	-19	intron_retention	FALSE	canonical	3	45	junction_3	81.2602130333303	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGGTTTACAGTCT	NA	False	NA	35	True	TATAAA	-32	NA	106048099	106068319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062518_106063568_106063712_106065794
ES.36042.8	chr9	+	2063	1	FSM	ENSMUSG00000020257.14	ENSMUST00000191147.2	3045	1	-4	986	-3	-986	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTATTCAGGC	NA	False	NA	NA	False	AATAAA	-13	NA	106048123	106050186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048100_106050200
ES.36042.9	chr9	+	4058	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	-3	-308	-3	308	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTTTGATCAGAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	106048123	106068646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ES.36043.1	chr9	-	4948	1	Antisense	novelGene_ENSMUSG00000065440.3_AS_novelGene_ENSMUSG00000020257.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGCCAAAGGGATGGCT	6294	False	NA	NA	False	NA	NA	NA	106060212	106055264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_106055300_106060200
ES.36044.1	chr9	+	172	1	Intergenic	novelGene_29331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106070953	106071125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106071000_106071100
ES.36045.1	chr9	-	1876	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	-26	-4	-26	0	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCTCTTTTATTAA	3817	False	NA	0	True	NA	NA	NA	106076500	106072145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ES.36045.10	chr9	-	1001	6	NIC	ENSMUSG00000020253.16	novel	1811	10	NA	NA	-358	-3	intron_retention	FALSE	canonical	0	0	junction_3	56.2188580460329	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	5872	False	NA	-7	True	NA	NA	NA	106074445	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073791_106073911_106074002_106074088_106074425
ES.36045.11	chr9	-	1629	8	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	45	-3	intron_retention	FALSE	canonical	1	1	junction_3	59.6794156561643	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3888	False	NA	-7	True	NA	NA	NA	106076429	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072684_106072985_106073138_106073248_106073357_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ES.36045.12	chr9	-	2540	8	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	43	-3	intron_retention	FALSE	canonical	3	111	junction_3	12.0203908388358	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3886	False	NA	-7	True	NA	NA	NA	106076431	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106075196_106075299_106075424_106076168
ES.36045.13	chr9	-	1719	10	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	24	-4	intron_retention	FALSE	canonical	2	9	junction_8	40.4859372018373	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTCTCTCTCT	3867	False	NA	-8	True	NA	NA	NA	106076450	106072153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075097_106075299_106075424_106076168
ES.36045.14	chr9	-	2893	6	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	-72	-4	intron_retention	FALSE	canonical	3	111	junction_2	11.8894911581615	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTCTCTCTCT	3940	False	NA	-8	True	NA	NA	NA	106076377	106072153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106073138_106073248_106073357_106073566_106073631_106073791_106075196_106075299_106075424_106076168
ES.36045.15	chr9	-	3971	4	NIC	ENSMUSG00000020253.16	novel	1811	10	NA	NA	43	-4	intron_retention	FALSE	canonical	3	123	junction_2	9.89949493661167	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTCTCTCTCT	3886	False	NA	-8	True	NA	NA	NA	106076431	106072153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106073138_106073248_106073911_106074002_106075196_106075299
ES.36045.16	chr9	-	2713	5	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	16	-4	intron_retention	FALSE	canonical	0	0	junction_2	59.6337781798202	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTCTCTCTCT	3859	False	NA	-8	True	NA	NA	NA	106076458	106072153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072670_106072985_106073357_106073783_106075196_106075299_106075424_106076168
ES.36045.17	chr9	-	1433	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	46	367	46	-367	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGCGTTCTAGAACTTC	3889	False	NA	NA	False	NA	NA	NA	106076428	106072516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ES.36045.18	chr9	-	167	1	Intergenic	novelGene_29332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1817	False	NA	NA	False	NA	NA	NA	106078500	106078333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106078300_106078500
ES.36045.2	chr9	-	1707	9	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	23	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	57.3557974401891	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTCTCTCTCTTT	3866	False	NA	-6	True	NA	NA	NA	106076451	106072151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072670_106072985_106073138_106073248_106073352_106073562_106073631_106073791_106073911_106074002_106074088_106074940_106075196_106075299_106075424_106076168
ES.36045.3	chr9	-	3243	9	NNC	ENSMUSG00000020253.16	novel	1811	10	NA	NA	-3321	-2	intron_retention	TRUE	non_canonical	0	0	junction_7	56.9395238388942	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTCTCTCTCTTT	51	False	NA	-6	True	NA	NA	NA	106080266	106072151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106075196_106075299_106075559_106079378_106079909_106079966
ES.36045.4	chr9	-	1846	10	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	11	-3	intron_retention	FALSE	canonical	1	3	junction_1	41.0504056309939	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3854	False	NA	-7	True	NA	NA	NA	106076463	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072684_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ES.36045.5	chr9	-	3709	5	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	27	-3	intron_retention	FALSE	canonical	3	111	junction_2	11.842719282327	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3870	False	NA	-7	True	NA	NA	NA	106076447	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106073138_106073248_106073357_106073566_106073631_106073791_106075196_106075299
ES.36045.6	chr9	-	1415	9	NNC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	-76	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	44.6680464650067	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3936	False	NA	-7	True	NA	NA	NA	106076381	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074081_106075155_106075196_106075299_106075424_106076168
ES.36045.8	chr9	-	1786	5	NIC	ENSMUSG00000020253.16	novel	1811	10	NA	NA	-425	-3	intron_retention	FALSE	canonical	3	111	junction_2	11.842719282327	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	5805	False	NA	-7	True	NA	NA	NA	106074512	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002
ES.36045.9	chr9	-	2964	8	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	26	-3	intron_retention	FALSE	canonical	3	111	junction_3	12.3915705384008	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTCTCTCTCTT	3869	False	NA	-7	True	NA	NA	NA	106076448	106072152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106075196_106075299
ES.36046.1	chr9	+	1713	8	NIC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	299	junction_7	35.24607374284	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106080291	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091677_106092026
ES.36046.10	chr9	+	1245	6	FSM	ENSMUSG00000023277.14	ENSMUST00000217523.2	819	6	-18	-408	-18	0	multi-exon	FALSE	canonical	3	299	junction_5	34.8906864363543	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106089369	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ES.36046.11	chr9	+	1331	5	ISM	ENSMUSG00000023277.14	ENSMUST00000189708.3	1627	7	5413	-2	0	0	3prime_fragment	FALSE	canonical	3	299	junction_4	38.6975451417787	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106089387	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106089551_106089930_106090036_106090136_106090263_106091299_106091677_106092026
ES.36046.2	chr9	+	1609	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	-14	1	-14	1	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGAGCCTGGGTGCCTT	NA	False	NA	18	True	AATAAA	-15	NA	106080292	106092587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ES.36046.3	chr9	+	2536	1	NIC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	1	-6701	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAATCATTTGTGCAT	NA	False	NA	NA	False	NA	NA	NA	106080313	106082849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106080300_106082800
ES.36046.4	chr9	+	2040	7	ISM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	8	2	2	0	intron_retention	FALSE	canonical	3	302	junction_1	34.6025047262959	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106080314	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299
ES.36046.5	chr9	+	1680	8	NIC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	299	junction_7	25.1079302863718	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106080321	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090263_106091299_106091451_106091554_106091677_106092026
ES.36046.6	chr9	+	1486	8	NIC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	124.218701145543	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACTGAGCCTGGG	NA	False	NA	12	True	AATAAA	-9	NA	106080331	106092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106080484_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ES.36046.7	chr9	+	1637	8	NNC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	123.337929680854	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106080341	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106080484_106084087_106084166_106088943_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091677_106092026
ES.36046.8	chr9	+	2589	8	NIC	ENSMUSG00000023277.14	novel	1596	9	NA	NA	0	-3	intron_retention	FALSE	canonical	3	299	junction_7	35.2171108689964	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACTGAGCCTGGG	NA	False	NA	12	True	AATAAA	-9	NA	106080343	106092581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106091451_106091554_106091677_106092026
ES.36046.9	chr9	+	1474	7	ISM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	4786	0	-135	0	3prime_fragment	FALSE	canonical	3	299	junction_6	32.8705372974374	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGAGCCTGGGTGCCT	NA	False	NA	17	True	AATAAA	-14	NA	106088782	106092586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ES.36047.1	chr9	-	176	1	Intergenic	novelGene_29333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAAAAGA	1758	False	NA	NA	False	NA	NA	NA	106095059	106094883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106094900_106095100
ES.36048.1	chr9	-	2605	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	789	5	2	-5	multi-exon	TRUE	canonical	3	139	junction_7	18.0612845611822	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACCCCTTGTCTTGT	8567	False	NA	NA	False	NA	NA	NA	106125064	106110661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.10	chr9	-	3656	8	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_4	61.9515940069342	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTATAGTAAAATCATAG	8584	False	NA	-28	True	AATAAA	-17	NA	106125047	106111139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106116022_106116730_106116916_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.14	chr9	-	5294	8	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	139	junction_4	16.9235978227239	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCTATAGTAAAATCATA	8567	False	NA	-29	True	AATAAA	-16	NA	106125064	106111140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106116022_106116730_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.15	chr9	-	2125	8	ISM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	789	3930	2	-710	5prime_fragment	FALSE	canonical	3	139	junction_4	20.6733585830179	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGAAAGTTGAAGGTT	8567	False	NA	NA	False	AATGAA	-11	NA	106125064	106114586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.16	chr9	-	180	1	Intergenic	novelGene_29334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACATTGGGT	6045	False	NA	NA	False	NA	NA	NA	106121046	106120866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106120900_106121000
ES.36048.17	chr9	-	213	1	Intergenic	novelGene_29335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATTACTG	5681	False	NA	NA	False	AAGAAA	-11	NA	106121410	106121197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106121200_106121400
ES.36048.2	chr9	-	2222	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	722	455	-62	14	multi-exon	FALSE	canonical	3	139	junction_7	18.0612845611822	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTAGGTGTTTCTGC	8500	False	NA	0	True	AATAAA	-45	NA	106125131	106111111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.3	chr9	-	3564	10	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-38	14	intron_retention	FALSE	canonical	3	139	junction_6	18.6196497825467	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTTAGGTGTTTCTGC	8524	False	NA	0	True	AATAAA	-45	NA	106125107	106111111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.4	chr9	-	3590	10	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-45	0	intron_retention	FALSE	canonical	3	139	junction_6	15.1803967156476	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8517	False	NA	-14	True	AATAAA	-31	NA	106125114	106111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.5	chr9	-	3032	10	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	139	junction_6	18.9469695286868	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8565	False	NA	-14	True	AATAAA	-31	NA	106125066	106111125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.6	chr9	-	2311	11	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	54.6974405251288	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATAGTCCTGGTTAG	8499	False	NA	-18	True	AATAAA	-27	NA	106125132	106111129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106113908_106115167_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.7	chr9	-	3533	7	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_4	64.0407856152798	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATAGTCCTGGTTAG	8567	False	NA	-18	True	AATAAA	-27	NA	106125064	106111129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106116022_106116730_106116916_106120360_106120595_106123957_106124178_106124983
ES.36048.8	chr9	-	2165	11	NNC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-39	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	54.1299362645108	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTATAGTAAAATCATAG	8523	False	NA	-28	True	AATAAA	-17	NA	106125108	106111139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106111397_106112586_106112750_106113638_106113902_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36048.9	chr9	-	3939	9	NIC	ENSMUSG00000032786.17	novel	3399	11	NA	NA	-38	1	intron_retention	FALSE	canonical	3	139	junction_5	19.6389281784928	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTATAGTAAAATCATAG	8524	False	NA	-28	True	AATAAA	-17	NA	106125107	106111139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106111397_106112586_106112750_106113638_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ES.36049.1	chr9	-	194	1	Intergenic	novelGene_29336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACATGTTCTAG	3582	False	NA	NA	False	NA	NA	NA	106156549	106156355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106156400_106156500
ES.3605.1	chr10	+	4550	2	Antisense	novelGene_ENSMUSG00000036112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93719468	93724572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93723401_93723954
ES.3605.2	chr10	+	4647	3	Antisense	novelGene_ENSMUSG00000036112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93719468	93724572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93720584_93720791_93723429_93723677
ES.3605.3	chr10	+	4407	3	Antisense	novelGene_ENSMUSG00000036112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCCTGAGGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93719468	93724601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93720584_93720791_93723321_93723838
ES.3605.4	chr10	+	2163	2	Antisense	novelGene_ENSMUSG00000036112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCCTGAGGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93719468	93724601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93720581_93723550
ES.3605.5	chr10	+	4615	2	Antisense	novelGene_ENSMUSG00000036112.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACCCTGAGGTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	93719468	93724601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93723321_93723838
ES.36050.1	chr9	+	1740	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	-33	630	-33	1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTGGGATTGGGTG	9524	False	NA	21	True	AATAAA	-33	NA	106158226	106227090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ES.36050.11	chr9	+	1094	9	ISM	ENSMUSG00000023345.18	ENSMUST00000214208.2	1250	10	2086	14	2086	0	3prime_fragment	FALSE	canonical	3	31	junction_7	98.2228811173853	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCCACATCTTACCCA	2117	False	NA	6	True	AATAAA	-18	NA	106162168	106227075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
ES.36050.2	chr9	+	2360	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	-22	-1	-22	1	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTTGCCTGATCTTG	9535	False	NA	23	True	AGTAAA	-17	NA	106158237	106227721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ES.36050.4	chr9	+	3333	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	272	-1268	-47	1268	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTCTGTCGACGCTG	9829	False	NA	NA	False	AATAAA	-14	NA	106158531	106228988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ES.36050.6	chr9	+	2242	12	NNC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.046453634658	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTTTGCCTGATCTT	9840	False	NA	22	True	AGTAAA	-16	NA	106158542	106227720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106167271_106167460_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ES.36050.7	chr9	+	3288	11	NIC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	-30	1268	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	88.6248272212702	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTCTGTCGACGCTG	9846	False	NA	NA	False	AATAAA	-14	NA	106158548	106228988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
ES.36050.8	chr9	+	2011	11	NIC	ENSMUSG00000023345.18	novel	2337	11	NA	NA	-24	-3	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	88.6248272212702	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTGCTTTGCCTGAT	9852	False	NA	19	True	AGTAAA	-13	NA	106158554	106227717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
ES.36051.1	chr9	-	661	1	Antisense	novelGene_ENSMUSG00000023345.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAAGGTGA	1668	False	NA	NA	False	NA	NA	NA	106158463	106157802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_106157800_106158500
ES.36052.1	chr9	+	3892	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-677	-2	-677	2	multi-exon	FALSE	canonical	3	135	junction_1	12	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTGGTGTTCAATAAG	NA	False	NA	40	True	AATAAA	-21	NA	106245153	106252925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106246523_106247899_106248335_106250837
ES.36052.2	chr9	+	2187	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	-100	1126	-100	742	multi-exon	FALSE	canonical	3	135	junction_1	12	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATTTTGCACGTGTG	NA	False	NA	NA	False	NA	NA	NA	106245730	106251797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106246523_106247899_106248335_106250837
ES.36052.3	chr9	+	3274	3	NIC	ENSMUSG00000053716.10	novel	3213	3	NA	NA	-16	0	intron_retention	FALSE	canonical	1	1	junction_2	67	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	False	NA	35	True	AATAAA	-16	NA	106245814	106252920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106246523_106247899_106248335_106250789
ES.36052.4	chr9	+	3130	4	NIC	ENSMUSG00000053716.10	novel	3213	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	68.585712797929	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	False	NA	38	True	AATAAA	-19	NA	106245830	106252923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106246523_106247899_106248335_106250837_106252267_106252349
ES.36052.5	chr9	+	1828	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	1	1384	1	484	multi-exon	FALSE	canonical	3	135	junction_1	12	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTTCTTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	106245831	106251539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106246523_106247899_106248335_106250837
ES.36052.6	chr9	+	3215	2	ISM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	1372	3	392	0	3prime_fragment	FALSE	canonical	3	159	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	False	NA	35	True	AATAAA	-16	NA	106247202	106252920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106248335_106250837
ES.36053.1	chr9	+	158	2	Intergenic	novelGene_29337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	106305608	106306006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106305637_106305876
ES.36054.1	chr9	+	761	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	-29	1	-29	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	2	True	AATAAA	-18	NA	106306623	106308766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ES.36054.2	chr9	+	1104	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	-80	-179	21	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	2	True	AATAAA	-18	NA	106306673	106308766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106307214_106307506_106307572_106308267
ES.36054.3	chr9	+	2020	1	NIC	ENSMUSG00000048758.15	novel	733	4	NA	NA	-7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	False	NA	2	True	AATAAA	-18	NA	106306746	106308766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106306700_106308800
ES.36054.4	chr9	+	849	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	10	-393	10	-2	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTTGTGTCTGTTGTCA	NA	False	NA	0	True	AATAAA	-16	NA	106306770	106308764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
ES.36055.1	chr9	-	2559	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-47	1104	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCGAGTATAACCTAGTA	NA	False	NA	NA	False	AATAAA	-22	NA	106315448	106309075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.10	chr9	-	1286	13	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	134.172670673113	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106314940	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827
ES.36055.11	chr9	-	1437	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	129.549691041622	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315421	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106310464_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.12	chr9	-	1887	14	FSM	ENSMUSG00000023262.14	ENSMUST00000187324.8	1832	14	-55	0	-14	0	multi-exon	FALSE	canonical	3	284	junction_13	61.5898823628318	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315415	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.14	chr9	-	1528	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	127.930784857616	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315417	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314267_106314827_106314933_106315331
ES.36055.15	chr9	-	2349	13	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-29	0	intron_retention	FALSE	canonical	1	1	junction_9	140.89207354883	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315430	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312724_106312813_106312904_106312982_106313209_106313324_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.17	chr9	-	4182	8	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-28	0	intron_retention	FALSE	canonical	3	284	junction_7	76.9712376707782	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315429	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106311798_106311883_106312029_106312163_106312724_106312813_106314000_106314087_106314933_106315331
ES.36055.19	chr9	-	2312	11	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	284	junction_10	62.5616495946199	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315408	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106314153_106314827_106314933_106315331
ES.36055.2	chr9	-	2255	12	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	6	-1	intron_retention	FALSE	canonical	3	284	junction_11	66.5957336136272	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTGGACAGTCATGGA	NA	False	NA	-8	True	AATAAA	-26	NA	106315395	106310180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312724_106312813_106312904_106312982_106313060_106313324_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.20	chr9	-	2846	8	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-29	0	intron_retention	FALSE	canonical	3	284	junction_7	79.934667200209	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315430	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106312724_106312813_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.21	chr9	-	2171	13	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-29	0	intron_retention	FALSE	canonical	3	198	junction_12	84.2979174647208	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315430	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106314000_106314087_106314153_106314827_106314937_106315331
ES.36055.23	chr9	-	2831	8	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	284	junction_7	74.1666628449131	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCTTAATACTGTGGA	NA	False	NA	-18	True	AATAAA	-16	NA	106315414	106310190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312724_106312813_106314153_106314827_106314933_106315331
ES.36055.24	chr9	-	1408	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	125.594829608905	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCTTAATACTGTGGA	NA	False	NA	-18	True	AATAAA	-16	NA	106315420	106310190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314939_106315345
ES.36055.25	chr9	-	1511	14	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	198	junction_13	81.0331220175141	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTTAATACTGTGG	NA	False	NA	-19	True	AATAAA	-15	NA	106315431	106310191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ES.36055.26	chr9	-	2355	13	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	198	junction_12	82.986779402237	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTTAATACTGTGG	NA	False	NA	-19	True	AATAAA	-15	NA	106315387	106310191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ES.36055.4	chr9	-	3287	5	NIC	ENSMUSG00000023262.14	novel	1122	12	NA	NA	74	1	intron_retention	FALSE	canonical	3	416	junction_1	38.2524509018703	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTGGACAGTCATGG	NA	False	NA	-9	True	AATAAA	-25	NA	106315286	106310181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106314153_106314827
ES.36055.5	chr9	-	1549	15	NNC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_9	173.675395082731	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315408	106310188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313158_106313212_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ES.36055.6	chr9	-	1724	14	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-28	0	intron_retention	FALSE	canonical	3	284	junction_13	61.5010463181307	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315429	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.7	chr9	-	1342	14	NIC	ENSMUSG00000023262.14	novel	1832	14	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	129.30085096074	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315450	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106314087_106314153_106314827_106314933_106315331
ES.36055.8	chr9	-	1554	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315557	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
ES.36055.9	chr9	-	2943	3	ISM	ENSMUSG00000023262.14	ENSMUST00000215395.2	1051	12	1544	-86	-1030	0	intron_retention	FALSE	canonical	3	416	junction_1	37.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	948	False	NA	-17	True	AATAAA	-17	NA	106313392	106310189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106310445_106310560_106310622_106310765
ES.36056.1	chr9	-	143	1	Intergenic	novelGene_29338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	106316884	106316741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106316700_106316900
ES.36057.10	chr9	-	5415	5	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_3	97.3524524601204	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTGACGTTGTGTTT	NA	False	NA	-5	True	AATAAA	-22	NA	106324848	106317255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106317604_106317819_106321142_106321288_106322856_106322969_106323029_106324729
ES.36057.12	chr9	-	1608	7	NNC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.893067242576	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGAGTGACGTTGTG	NA	False	NA	-8	True	AATAAA	-19	NA	106324860	106317258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106317604_106317819_106318424_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ES.36057.2	chr9	-	1287	7	NNC	ENSMUSG00000042210.18	novel	1109	7	NA	NA	7	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	104.893067242576	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTTGTGTTTCCTGA	NA	False	NA	0	True	AATAAA	-27	NA	106324755	106317250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106317604_106317819_106318200_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ES.36057.3	chr9	-	1264	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACGTTGTGTTTCCTGA	NA	False	NA	0	True	AATAAA	-27	NA	106324876	106317250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ES.36057.4	chr9	-	4212	6	NIC	ENSMUSG00000042210.18	novel	1262	6	NA	NA	22	1	intron_retention	FALSE	canonical	0	0	junction_4	94.7573743832109	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	-1	True	AATAAA	-26	NA	106324855	106317251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106317604_106317819_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ES.36057.5	chr9	-	4433	5	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	12	1	intron_retention	FALSE	canonical	0	0	junction_3	94.9012644805115	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	False	NA	-1	True	AATAAA	-26	NA	106324865	106317251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324729
ES.36057.7	chr9	-	925	5	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	99.0631111968527	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGACGTTGTGTTTCC	NA	False	NA	-3	True	AATAAA	-24	NA	106324883	106317253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106317604_106317819_106318056_106322724_106322851_106322969_106323029_106324729
ES.36057.8	chr9	-	1286	7	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	29	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	104.893067242576	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGTGACGTTGTGTTTC	NA	False	NA	-4	True	AATAAA	-23	NA	106324848	106317254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106317604_106317819_106318110_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323034_106324729
ES.36058.1	chr9	+	1480	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	262	3	-16	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGCTTTTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	106325835	106330119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
ES.36058.10	chr9	+	2031	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.339193584351	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAAGCTGTGCAGTAA	1580	False	NA	19	True	AATAAA	-12	NA	106331020	106341203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337357_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.11	chr9	+	2046	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.339193584351	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGTGCAGTAATACTAG	1581	False	NA	25	True	AATAAA	-18	NA	106331021	106341209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337357_106337585_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.12	chr9	+	2269	12	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	316	junction_10	32.6888663534096	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1582	False	NA	22	True	AATAAA	-15	NA	106331022	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.13	chr9	+	2072	12	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-18	-5	intron_retention	FALSE	canonical	3	30	junction_11	102.531913999641	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1582	False	NA	22	True	AATAAA	-15	NA	106331022	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ES.36058.14	chr9	+	2494	11	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	316	junction_9	34.2817735830572	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1587	False	NA	27	True	AATAAA	-20	NA	106331027	106341211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.15	chr9	+	1944	13	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	107.21732861602	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1588	False	NA	22	True	AATAAA	-15	NA	106331028	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340427
ES.36058.16	chr9	+	2039	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.339193584351	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1589	False	NA	24	True	AATAAA	-17	NA	106331029	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337369_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.17	chr9	+	2051	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.339193584351	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1590	False	NA	24	True	AATAAA	-17	NA	106331030	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337357_106337570_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.18	chr9	+	1839	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1594	False	NA	22	True	AATAAA	-15	NA	106331034	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ES.36058.19	chr9	+	2194	14	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	138.043471413899	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1594	False	NA	22	True	AATAAA	-15	NA	106331034	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106333484_106333643_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.2	chr9	+	1320	5	NNC	ENSMUSG00000042073.16	novel	1745	4	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTTTGCTGTCTCCG	NA	False	NA	12	True	AATAAA	-19	NA	106325873	106330121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182_106329385_106329508
ES.36058.20	chr9	+	1801	13	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	137.831922604631	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1600	False	NA	22	True	AATAAA	-15	NA	106331040	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338561_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ES.36058.21	chr9	+	2030	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.339193584351	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1601	False	NA	22	True	AATAAA	-15	NA	106331041	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337349_106337570_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.22	chr9	+	2126	12	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	316	junction_10	32.5850444831205	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1601	False	NA	22	True	AATAAA	-15	NA	106331041	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.24	chr9	+	1985	13	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	107.827408389518	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1617	False	NA	24	True	AATAAA	-17	NA	106331057	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338563_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.25	chr9	+	2115	12	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	316	junction_10	34.2301399257853	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1626	False	NA	24	True	AATAAA	-17	NA	106331066	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339614_106339706_106339877_106340329
ES.36058.27	chr9	+	1728	12	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	158.547070467161	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1701	False	NA	22	True	AATAAA	-15	NA	106331141	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331207_106337203_106337357_106337585_106337629_106337849_106337967_106338191_106338324_106338461_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ES.36058.28	chr9	+	1889	13	NNC	ENSMUSG00000023495.14	novel	968	8	NA	NA	276	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.943146234982	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1967	False	NA	24	True	AATAAA	-17	NA	106331407	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106331436_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340334
ES.36058.29	chr9	+	2559	13	NIC	ENSMUSG00000023495.14	novel	968	8	NA	NA	8	-4	intron_retention	FALSE	canonical	0	0	junction_1	141.226374622055	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGTGCAGTAATACT	3450	False	NA	23	True	AATAAA	-16	NA	106332890	106341207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106333206_106333484_106333643_106337203_106337349_106337474_106337499_106337595_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.3	chr9	+	1790	3	ISM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	301	3	23	0	intron_retention	FALSE	canonical	1	1	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGCTTTTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	106325874	106330119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106325909_106327202_106327431_106328591
ES.36058.4	chr9	+	4394	16	Fusion	ENSMUSG00000023495.14_ENSMUSG00000042073.16	novel	2035	13	NA	NA	23	-3	intron_retention	FALSE	canonical	1	1	junction_1	150.244985126145	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	NA	False	NA	24	True	AATAAA	-17	NA	106325874	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.5	chr9	+	3813	2	NNC	ENSMUSG00000042073.16	novel	1627	3	NA	NA	28	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACATGCTTTTGCTGT	NA	False	NA	7	True	AATAAA	-14	NA	106325879	106330116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106329580_106330003
ES.36058.6	chr9	+	2030	14	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	101.847199622797	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1136	False	NA	22	True	AATAAA	-15	NA	106330576	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106330645_106331108_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.7	chr9	+	2180	13	NNC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	133.543272221238	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTGTGCAGTAATAC	1172	False	NA	22	True	AATAAA	-15	NA	106330612	106341206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106330842_106331108_106331207_106337203_106337362_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36058.8	chr9	+	2078	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-24	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_11	107.30677078151	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGTGCAGTAATACT	1576	False	NA	23	True	AATAAA	-16	NA	106331016	106341207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339683_106339877_106340329
ES.36058.9	chr9	+	2194	12	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	316	junction_10	34.3612312770662	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTGCAGTAATACTA	1578	False	NA	24	True	AATAAA	-17	NA	106331018	106341208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ES.36059.1	chr9	+	2129	1	Antisense	novelGene_ENSMUSG00000091735.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTAGGTGGCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	106341833	106343962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_106341800_106344000
ES.3606.1	chr10	-	3510	12	NNC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	1	16591	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	642.319158072096	1154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGGGATTATAGCTCA	NA	False	NA	NA	False	AAGAAA	-5	NA	93725669	93677759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93677782_93695279_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.11	chr10	-	4804	10	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2022	junction_3	157.927628369672	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725626	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93716001_93722855_93722964_93725399
ES.3606.13	chr10	-	3892	8	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	7392	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	756.926950348094	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93715956	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715934
ES.3606.14	chr10	-	4336	12	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	642.319158072096	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725637	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93694547_93694595_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.15	chr10	-	4344	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	671.364290084005	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725661	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715930_93716001_93722855_93722964_93725399
ES.3606.18	chr10	-	4382	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-8	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	823.15245246552	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAATAAATTTTGGAGTG	NA	False	NA	-24	True	AATAAA	-13	NA	93725654	93694360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701355_93704724_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722961_93725399
ES.3606.19	chr10	-	4274	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	15	135	9	-135	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGACTGCCTTATTAG	NA	False	NA	NA	False	GATAAA	-44	NA	93725661	93694485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.2	chr10	-	3757	2	Antisense	novelGene_ENSMUSG00000020020.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	668	False	NA	NA	False	NA	NA	NA	93682674	93678868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_93681270_93681318
ES.3606.20	chr10	-	4136	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	31	257	1	-257	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAATAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93725645	93694607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.21	chr10	-	3491	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	1	932	1	405	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCACATGAATCTTTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	93725675	93695282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.23	chr10	-	3204	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	14	1206	8	131	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGGTTTTTTGCGTGGG	NA	False	NA	NA	False	AGTAAA	-18	NA	93725662	93695556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.25	chr10	-	2208	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	21	2195	-9	244	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTGTGCCAACTGG	NA	False	NA	NA	False	TTTAAA	-19	NA	93725655	93696545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.27	chr10	-	2550	12	NIC	ENSMUSG00000036112.16	novel	2551	12	NA	NA	-34	14	intron_retention	FALSE	canonical	0	0	junction_11	642.319158072096	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATGGTTGTAATTC	NA	False	NA	-2	True	AATAAA	-30	NA	93727025	93696775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399_93726161_93726958
ES.3606.28	chr10	-	4331	10	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-3	9	intron_retention	FALSE	canonical	3	2022	junction_5	148.474547845833	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATGTGTATGGTTGT	NA	False	NA	-7	True	AATAAA	-25	NA	93725640	93696780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.3	chr10	-	174	1	Intergenic	novelGene_2754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTTTTTACTCAA	NA	False	NA	NA	False	NA	NA	NA	93685090	93684916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93684900_93685100
ES.3606.31	chr10	-	1778	9	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-8	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	732.263517714081	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725654	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.32	chr10	-	1767	9	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	951.299103528958	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725654	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93704728_93704824_93705978_93706161_93707349_93707510_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.34	chr10	-	1967	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	672.55322465958	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725645	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704722_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.35	chr10	-	1992	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	673.526606749874	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725654	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698918_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.36	chr10	-	3553	7	ISM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	16011	-8	-2115	7	3prime_fragment	FALSE	canonical	3	2022	junction_3	134.41064772637	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93709626	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349
ES.3606.38	chr10	-	1793	9	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-3	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	868.316537545497	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725649	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93722855_93722961_93725399
ES.3606.39	chr10	-	1897	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	1	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	665.52448489894	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAATGTGTATGGTT	NA	False	NA	-9	True	AATAAA	-23	NA	93725636	93696782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722923_93725413
ES.3606.4	chr10	-	7351	1	FSM	ENSMUSG00000036112.16	ENSMUST00000181009.2	1753	1	1554	-7152	1554	3392	mono-exon	FALSE	NA	NA	NA	NA	NA	1148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCTCAGGAGTGAGCT	NA	False	NA	NA	False	NA	NA	NA	93698309	93690958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93691000_93698300
ES.3606.42	chr10	-	2024	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181217.8	1984	11	-34	-6	-4	5	multi-exon	FALSE	canonical	3	15	junction_8	666.978530389097	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTTAATGTGTATGG	NA	False	NA	-11	True	AATAAA	-21	NA	93725680	93696784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715535_93715934_93716001_93722855_93722964_93725399
ES.3606.43	chr10	-	1939	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	823.994174736691	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACATTTTAATGTGTAT	NA	False	NA	-13	True	AATAAA	-19	NA	93725636	93696786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93715995_93722855_93722961_93725399
ES.3606.44	chr10	-	2382	10	NIC	ENSMUSG00000036112.16	novel	1984	11	NA	NA	1	1	intron_retention	FALSE	canonical	3	309	junction_9	603.635242653077	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACATTTTAATGTGT	NA	False	NA	-15	True	AATAAA	-17	NA	93725645	93696788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93716001_93722855_93722961_93725399
ES.3606.47	chr10	-	1555	7	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-11	1	combination_of_known_splicesites	FALSE	canonical	2	18	junction_1	826.184957096977	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACATTTTAATGTGT	NA	False	NA	-15	True	AATAAA	-17	NA	93725657	93696788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.49	chr10	-	5063	6	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-1258	1	intron_retention	FALSE	canonical	3	2022	junction_5	136.699670811601	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACATTTTAATGTGT	NA	False	NA	-15	True	AATAAA	-17	NA	93708769	93696788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93701366_93704728_93704824_93705978_93706161_93707349
ES.3606.5	chr10	-	4439	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	0	-15	0	15	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATCTGCATTAAATCT	NA	False	NA	1	True	AATAAA	-38	NA	93725676	93694335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.56	chr10	-	1920	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	-44	0	-5	0	multi-exon	FALSE	canonical	3	36	junction_8	660.841047453924	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725681	93696790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ES.3606.58	chr10	-	1941	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	665.52448489894	1134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725641	93696790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722956_93725399
ES.3606.64	chr10	-	1861	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	15	2548	9	-108	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGATGCTTTGAATGAC	NA	False	NA	-125	True	NA	NA	NA	93725661	93696898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.65	chr10	-	1569	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	15	2840	9	252	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTTTATTTTCTAAGC	NA	False	NA	3	True	ATTAAA	-21	NA	93725661	93697190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.66	chr10	-	3913	7	ISM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	15240	403	-2886	249	3prime_fragment	FALSE	canonical	3	2022	junction_3	134.41064772637	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTCTTTATTTTCTA	NA	False	NA	0	True	ATTAAA	-18	NA	93710397	93697193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349
ES.3606.67	chr10	-	3127	2	ISM	ENSMUSG00000036112.16	ENSMUST00000181894.2	3034	3	-1162	1506	271	249	intron_retention	FALSE	canonical	3	2160	junction_1	0	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTCTTTATTTTCTA	NA	False	NA	0	True	ATTAAA	-18	NA	93701094	93697193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93697465_93698238
ES.3606.68	chr10	-	4929	10	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	9	249	intron_retention	FALSE	canonical	3	2022	junction_3	155.69517543688	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACGTCTTTATTTTCTA	NA	False	NA	0	True	ATTAAA	-18	NA	93725661	93697193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.3606.69	chr10	-	1588	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181217.8	1984	11	-9	405	-9	247	multi-exon	FALSE	canonical	3	15	junction_8	666.978530389097	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAACGTCTTTATTTTC	NA	False	NA	-2	True	ATTAAA	-16	NA	93725655	93697195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715535_93715934_93716001_93722855_93722964_93725399
ES.3606.7	chr10	-	4347	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	20	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	825.75372236521	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCAGTATCTGCATTA	NA	False	NA	-4	True	AATAAA	-33	NA	93725570	93694340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698918_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722961_93725399
ES.3606.73	chr10	-	202	1	FSM	ENSMUSG00000036112.16	ENSMUST00000181009.2	1753	1	1551	0	1551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	93698312	93698110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93698100_93698300
ES.3606.74	chr10	-	384	3	FSM	ENSMUSG00000036112.16	ENSMUST00000181104.2	931	3	-22	569	1	-569	multi-exon	FALSE	canonical	3	2075	junction_1	110	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAGAAGAAAAAGAAG	NA	False	NA	-1	True	NA	NA	NA	93725645	93715970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93716001_93722855_93722964_93725399
ES.3606.8	chr10	-	4376	11	NNC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	823.994174736691	1150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725637	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93715995_93722855_93722961_93725399
ES.3606.9	chr10	-	4202	9	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	732.263517714081	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725646	93694350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ES.36060.1	chr9	-	1377	1	FSM	ENSMUSG00000091735.3	ENSMUST00000164834.3	1977	1	589	11	589	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTGTACAGAGTGTC	NA	False	NA	NA	False	AAAACA	-8	NA	106342548	106341171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106341200_106342500
ES.36061.1	chr9	+	1602	15	NNC	ENSMUSG00000041506.16	novel	725	7	NA	NA	-989	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	355.234680980656	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106352172	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106352357_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.10	chr9	+	2752	12	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	21	-2	intron_retention	FALSE	canonical	3	1203	junction_8	81.5387146297455	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTCCCTTGTTCCTCTG	NA	False	NA	19	True	ATTAAA	-19	NA	106354488	106362619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106360411_106360755_106360857_106360945_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.12	chr9	+	2192	13	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	23	-2	intron_retention	FALSE	canonical	3	1203	junction_10	79.0785035406097	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354490	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106362350_106362450
ES.36061.15	chr9	+	1952	10	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-20	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	429.957907787653	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCTTGTTCTCCCTTGT	NA	False	NA	12	True	ATTAAA	-12	NA	106354496	106362612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106359446_106360236_106360317_106360411_106360755_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.17	chr9	+	1538	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	355.426798629019	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354498	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361418_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.18	chr9	+	2376	11	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	-18	0	intron_retention	FALSE	canonical	3	1203	junction_9	73.0536788943582	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354498	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106361081_106361164_106361228_106361409_106361556_106361638
ES.36061.19	chr9	+	1973	13	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	-17	0	intron_retention	FALSE	canonical	3	1203	junction_9	78.661546443538	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354499	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.2	chr9	+	1699	16	NNC	ENSMUSG00000041506.16	novel	725	7	NA	NA	-963	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	465.278392172065	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106352198	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106352357_106353062_106353194_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.20	chr9	+	1324	11	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	544.141902448249	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354499	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360317_106360411_106360755_106360857_106361409_106361556_106361638_106361719_106362275
ES.36061.21	chr9	+	2571	14	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-17	0	intron_retention	FALSE	canonical	3	1203	junction_10	77.4719647707723	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354499	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.23	chr9	+	1440	14	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	365.287776640984	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCTTGTTCTCCCTTGT	NA	False	NA	12	True	ATTAAA	-12	NA	106354505	106362612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106362292_106362350_106362450
ES.36061.25	chr9	+	1521	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	353.748216985483	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354517	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361705_106362266_106362350_106362450
ES.36061.26	chr9	+	1528	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	354.878802249041	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354517	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358964_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.27	chr9	+	1615	14	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1203	junction_10	77.3220422961789	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354517	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.28	chr9	+	1954	13	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1203	junction_10	78.8139511056823	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354517	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360857_106360945_106361081_106361164_106361228_106361409_106361719_106362275_106362350_106362450
ES.36061.29	chr9	+	3107	14	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	1	3106	intron_retention	FALSE	non_canonical	0	0	junction_13	365.287776640984	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTTTTTTGGAGAC	NA	False	NA	NA	False	ATTAAA	-22	NA	106354517	106365729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106362350_106362450_106363509_106365683
ES.36061.3	chr9	+	1643	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	-57	0	-57	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106354410	106362623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.30	chr9	+	1602	14	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	1203	junction_10	75.7776254623359	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGACCTTGTTCTCCCTTG	NA	False	NA	11	True	ATTAAA	-11	NA	106354523	106362611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.31	chr9	+	1513	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.116222123157	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354525	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358427_106358520_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.32	chr9	+	1685	13	NIC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	11	0	intron_retention	FALSE	canonical	3	1203	junction_9	78.5286571895891	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354539	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.34	chr9	+	3439	6	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	12	0	intron_retention	FALSE	canonical	3	1253	junction_1	56.8844442708198	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354540	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106359086_106360110
ES.36061.35	chr9	+	1650	13	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	3114	0	-417	0	3prime_fragment	FALSE	canonical	3	1203	junction_9	75.8406589868229	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106357581	106362623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.36	chr9	+	1128	8	ISM	ENSMUSG00000041506.16	ENSMUST00000125630.8	1611	14	5528	2	-1008	-2	3prime_fragment	FALSE	canonical	3	1203	junction_4	81.0668658250328	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106360044	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.37	chr9	+	3114	1	Genic_Genomic	ENSMUSG00000041506.16	novel	NA	NA	NA	NA	-49	1494	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTCCTCCTAGACC	NA	False	NA	NA	False	NA	NA	NA	106361003	106364117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_106361000_106364100
ES.36061.4	chr9	+	1601	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	350.514607107776	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354454	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360423_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.5	chr9	+	1679	14	FSM	ENSMUSG00000041506.16	ENSMUST00000125630.8	1611	14	-62	-6	-13	0	multi-exon	FALSE	canonical	3	1203	junction_10	77.2574272104087	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354454	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36061.7	chr9	+	1822	12	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	21	-2	intron_retention	FALSE	canonical	3	1203	junction_9	72.1153804619622	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTGTTCTCCCTTGTT	NA	False	NA	13	True	ATTAAA	-13	NA	106354488	106362613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361228_106361409_106361556_106361638_106361719_106362275
ES.36061.8	chr9	+	1728	13	NIC	ENSMUSG00000041506.16	novel	1611	14	NA	NA	21	0	intron_retention	FALSE	canonical	3	1203	junction_10	79.9207941235154	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCCTTGTTCCTCTGGT	NA	False	NA	21	True	ATTAAA	-21	NA	106354488	106362621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361719_106362275_106362350_106362450
ES.36061.9	chr9	+	1546	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	476.120424013994	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354488	106362615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360114_106360236_106360317_106360411_106360762_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ES.36062.1	chr9	-	1971	7	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1863	-277	1591	-28	3prime_fragment	FALSE	canonical	2	3	junction_2	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106351712	106347548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595
ES.36062.2	chr9	-	3683	5	NIC	ENSMUSG00000023249.16	novel	2246	9	NA	NA	945	-1	intron_retention	FALSE	canonical	2	5	junction_3	1.78535710713571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCCTGTCCGACTGAA	NA	False	NA	NA	False	NA	NA	NA	106352358	106347826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106348602_106348958_106350406_106350631_106351484_106351595_106352068_106352221
ES.36062.3	chr9	-	2362	11	FSM	ENSMUSG00000023249.16	ENSMUST00000067218.14	2962	11	287	313	7	-8	multi-exon	FALSE	canonical	1	1	junction_10	2.71293199325011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCATTTCTCCTGTCC	NA	False	NA	NA	False	NA	NA	NA	106353861	106347833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353691
ES.36062.4	chr9	-	1973	11	NNC	ENSMUSG00000023249.16	novel	2962	11	NA	NA	16	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	2.9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTACAATG	NA	False	NA	NA	False	NA	NA	NA	106353852	106348217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353687
ES.36062.5	chr9	-	1584	6	ISM	ENSMUSG00000023249.16	ENSMUST00000145396.8	2246	9	1535	30	1470	-24	3prime_fragment	FALSE	canonical	2	3	junction_2	2.19089023002066	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTACAATG	NA	False	NA	NA	False	NA	NA	NA	106351833	106348217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106351033_106351256_106351484_106351595
ES.36063.1	chr9	+	161	1	Intergenic	novelGene_29339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAATAAAAATAAAA	6418	False	NA	NA	False	NA	NA	NA	106483733	106483894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106483700_106483900
ES.36064.2	chr9	-	4897	5	ISM	ENSMUSG00000023192.13	ENSMUST00000023959.13	4711	6	-5	1420	-3	348	intron_retention	FALSE	canonical	0	0	junction_4	2.27760839478607	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGTTTTGTTAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	106533284	106521735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106522291_106522495_106522677_106524349_106525426_106527594_106528433_106531037
ES.36065.1	chr9	+	6308	2	Antisense	novelGene_ENSMUSG00000040813.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTAAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	106554793	106561144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_106559783_106559825
ES.36066.1	chr9	+	2768	1	Antisense	novelGene_ENSMUSG00000040813.17_AS_novelGene_ENSMUSG00000040661.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTGTTCTGTTTGCTTT	826	False	NA	NA	False	AATAAA	-29	NA	106562575	106565343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_106562600_106565300
ES.36067.1	chr9	+	2419	1	Intergenic	novelGene_29342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGGGACAAAGGAAACA	1425	False	NA	NA	False	NA	NA	NA	106628031	106630450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106628000_106630400
ES.36068.1	chr9	-	2070	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	-175	1	-71	-1	multi-exon	FALSE	canonical	3	46	junction_5	161.744242555956	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7797	False	NA	-1	True	AATAAA	-27	NA	106563197	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ES.36068.10	chr9	-	4456	5	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	1	2	intron_retention	FALSE	canonical	3	285	junction_4	71.8031162276401	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGAGTTGGTTTTTG	7869	False	NA	-4	True	AATAAA	-24	NA	106563125	106535948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ES.36068.11	chr9	-	1103	7	NNC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	166.556963895906	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGAGTTGGTTTTT	7847	False	NA	-5	True	AATAAA	-23	NA	106563147	106535949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106536103_106536424_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ES.36068.12	chr9	-	5665	6	NNC	ENSMUSG00000040813.17	novel	1896	6	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_3	211.792917728615	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	8112	False	NA	-6	True	AATAAA	-22	NA	106562882	106535950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106536507_106539558_106539728_106550715_106550938_106555151_106559363_106562127_106562195_106562442
ES.36068.13	chr9	-	4145	5	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	285	junction_4	75.7970151127338	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7891	False	NA	-6	True	AATAAA	-22	NA	106563103	106535950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106562195_106563033
ES.36068.14	chr9	-	5411	27	Fusion	ENSMUSG00000040813.17_ENSMUSG00000040661.7	novel	9305	22	NA	NA	7	-1	multi-exon	TRUE	canonical	0	0	junction_5	152.466312119632	350	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	7320	False	NA	-7	True	AATAAA	-21	NA	106666368	106535951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106570458_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.15	chr9	-	4176	4	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	5	junction_2	194.187194909105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	7850	False	NA	-7	True	AATAAA	-21	NA	106563144	106535951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106539728_106550715_106550938_106562127_106562195_106563033
ES.36068.16	chr9	-	1110	5	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	189.758234340436	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	7864	False	NA	-7	True	AATAAA	-21	NA	106563130	106535951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106562127_106562195_106563033
ES.36068.17	chr9	-	4051	5	ISM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-1823	2	-1811	-2	intron_retention	FALSE	canonical	3	423	junction_4	22.3872173348989	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGATTTGAGTTGGTT	6057	False	NA	-8	True	AATAAA	-20	NA	106564937	106535952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127
ES.36068.18	chr9	-	4297	4	NIC	ENSMUSG00000040813.17	novel	822	5	NA	NA	36	-2	intron_retention	FALSE	canonical	2	5	junction_2	197.757989022497	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGATTTGAGTTGGTT	7928	False	NA	-8	True	AATAAA	-20	NA	106563066	106535952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106539728_106550715_106550938_106562127_106562195_106562833
ES.36068.19	chr9	-	7833	2	ISM	ENSMUSG00000040813.17	ENSMUST00000214885.2	501	4	7728	-3622	7728	-2	3prime_fragment	FALSE	canonical	3	478	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGATTTGAGTTGGTT	6878	False	NA	-8	True	AATAAA	-20	NA	106554773	106535952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106539728_106550715
ES.36068.2	chr9	-	1433	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	-37	-5	-25	-1	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7843	False	NA	-1	True	AATAAA	-27	NA	106563151	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ES.36068.20	chr9	-	1609	6	NIC	ENSMUSG00000040813.17	novel	1896	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	178.029660450162	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGATTTGAGTTGGT	7876	False	NA	-9	True	AATAAA	-19	NA	106563118	106535953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562816
ES.36068.21	chr9	-	1070	5	FSM	ENSMUSG00000040813.17	ENSMUST00000185257.7	785	5	8	-293	-2	-3	multi-exon	FALSE	canonical	1	4	junction_3	190.155857127778	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGATTTGAGTTGGT	7884	False	NA	-9	True	AATAAA	-19	NA	106563110	106535953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106562145_106562195_106563033
ES.36068.22	chr9	-	4630	5	NIC	ENSMUSG00000040813.17	novel	1364	6	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	151	junction_4	128.369340186822	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGATTTGAGTTGGT	7890	False	NA	-9	True	AATAAA	-19	NA	106563104	106535953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ES.36068.23	chr9	-	9321	22	NNC	ENSMUSG00000040661.7	novel	9305	22	NA	NA	3	4	intron_retention	FALSE	canonical	2	2	junction_14	9.28632476625705	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGTCAAGAAATTTTC	7298	False	NA	2	True	AATAAA	-15	NA	106666390	106565276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593472_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.24	chr9	-	9308	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	-1	-2	-1	2	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGGTCAAGAAATTT	7294	False	NA	0	True	AATAAA	-13	NA	106666394	106565278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.25	chr9	-	9025	21	NNC	ENSMUSG00000040661.7	novel	9305	22	NA	NA	-31125	-2	intron_retention	FALSE	canonical	0	0	junction_13	8.71937497760017	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGTTTGGTCAAGAA	NA	False	NA	-4	True	AATAAA	-9	NA	106631195	106565282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590865_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143
ES.36068.27	chr9	-	7908	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	32	1365	14	-657	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAAGGAGCTGGGGTC	7327	False	NA	NA	False	ACTAAA	-26	NA	106666361	106566645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.28	chr9	-	6775	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	23	2507	5	-1799	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTCTCAGTCAAATGT	7318	False	NA	NA	False	TTTAAA	-18	NA	106666370	106567787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.29	chr9	-	6385	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	-6	2926	-6	-2218	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCCTGCGTCCTA	7289	False	NA	1	True	CATAAA	-20	NA	106666399	106568206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.3	chr9	-	1466	6	NNC	ENSMUSG00000040813.17	novel	1364	6	NA	NA	-565	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	180.017110297883	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7303	False	NA	-1	True	AATAAA	-27	NA	106563691	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563540
ES.36068.31	chr9	-	5355	23	NNC	ENSMUSG00000040661.7	novel	9305	22	NA	NA	11	-3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.4114725342085	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGAAGTGTCAGTC	7324	False	NA	NA	False	AGTAAA	-20	NA	106666364	106569286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106588913_106588999_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.32	chr9	-	5296	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	-1	4010	-1	-3302	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTTTTGAAGTGTC	7294	False	NA	NA	False	AGTAAA	-16	NA	106666394	106569290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.33	chr9	-	4869	22	NNC	ENSMUSG00000040661.7	novel	9305	22	NA	NA	5	-3741	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	9.41870575719348	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGAGCTGTAATAGTGG	7318	False	NA	NA	False	AAAAAG	-18	NA	106666370	106569729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596375_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.35	chr9	-	4438	21	ISM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	35204	4504	-31119	-3796	3prime_fragment	FALSE	canonical	3	17	junction_10	6.61362230551458	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCAGGCTCTATTGCTG	NA	False	NA	NA	False	NA	NA	NA	106631189	106569784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143
ES.36068.36	chr9	-	4322	21	ISM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	17	7127	-1	-6419	5prime_fragment	FALSE	canonical	3	17	junction_9	7.46240577829965	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGTAGGATTTTTGGTC	7312	False	NA	NA	False	NA	NA	NA	106666376	106572407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.37	chr9	-	4023	21	ISM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	18	7425	0	-6717	5prime_fragment	FALSE	canonical	3	17	junction_9	7.46240577829965	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTTTTTTTTCACTCCC	7313	False	NA	NA	False	AATAAA	-20	NA	106666375	106572705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ES.36068.38	chr9	-	179	1	Intergenic	novelGene_29340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	106612245	106612066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106612100_106612200
ES.36068.39	chr9	-	3407	1	Intergenic	novelGene_29341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTATCAGGGGAGAG	NA	False	NA	NA	False	NA	NA	NA	106630364	106626957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106627000_106630400
ES.36068.4	chr9	-	2323	7	NNC	ENSMUSG00000040813.17	novel	1896	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	219.773873687378	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7868	False	NA	-1	True	AATAAA	-27	NA	106563126	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106536507_106539558_106539728_106550715_106550938_106556164_106556489_106559066_106559363_106562127_106562195_106562442
ES.36068.40	chr9	-	177	1	Intergenic	novelGene_29343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAATCAAACTAA	NA	False	NA	NA	False	NA	NA	NA	106635551	106635374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106635400_106635600
ES.36068.5	chr9	-	1656	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	-293	1	-48	-1	multi-exon	FALSE	canonical	3	151	junction_5	120.179865202121	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7820	False	NA	-1	True	AATAAA	-27	NA	106563174	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ES.36068.6	chr9	-	9736	5	NIC	ENSMUSG00000040813.17	novel	1364	6	NA	NA	1	-1	intron_retention	TRUE	canonical	3	151	junction_4	132.395949711462	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7869	False	NA	-1	True	AATAAA	-27	NA	106563125	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106536507_106539558_106539728_106550715_106559363_106562127_106562195_106562833
ES.36068.7	chr9	-	1415	6	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	172.206387802543	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTTGGTTTTTGTCT	7843	False	NA	-1	True	AATAAA	-27	NA	106563151	106535945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562145_106562195_106563033
ES.36068.8	chr9	-	3161	4	NNC	ENSMUSG00000040813.17	novel	785	5	NA	NA	9445	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	224.861438816589	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGAGTTGGTTTTTGTC	8595	False	NA	-2	True	AATAAA	-26	NA	106553056	106535946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106536507_106539206_106539298_106539558_106539728_106550715
ES.36068.9	chr9	-	1311	5	FSM	ENSMUSG00000040813.17	ENSMUST00000188892.7	822	5	-1	-488	-1	-3	multi-exon	FALSE	canonical	2	5	junction_3	202.069758994264	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGAGTTGGTTTTTGT	7867	False	NA	-3	True	AATAAA	-25	NA	106563127	106535947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106562127_106562195_106562833
ES.36069.1	chr9	+	179	1	Intergenic	novelGene_29344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGGTATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106671945	106672124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106671900_106672100
ES.3607.1	chr10	+	174	1	Intergenic	novelGene_2756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	93728769	93728943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_93728800_93728900
ES.36070.1	chr9	+	175	1	Intergenic	novelGene_29345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAGAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	106674399	106674574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_106674400_106674600
ES.36071.1	chr9	-	176	1	Intergenic	novelGene_29346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAGAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	106694731	106694555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106694600_106694700
ES.36072.1	chr9	+	5555	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-49	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	109.656154511374	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTTTCCTTGTTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	106699023	106758185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699110_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757413_106757466
ES.36072.12	chr9	+	4560	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	129.583299839224	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699101	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731490_106735634_106735805_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.14	chr9	+	6132	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	50	-6	intron_retention	FALSE	non_canonical	0	0	junction_23	85.570320632547	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTTTCCTTGTTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	106699122	106758185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.15	chr9	+	5095	25	NNC	ENSMUSG00000040325.17	novel	4945	23	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	84.0237131707472	516	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAGGCATTTCTAACGA	NA	False	NA	NA	False	TATAAA	-21	NA	106699123	106757642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.19	chr9	+	5651	25	NNC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	55	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	110.01777002931	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCCTTTCCTTGTTT	NA	False	NA	7	True	AATAAA	-18	NA	106699127	106758182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.2	chr9	+	5791	24	NIC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	False	NA	16	True	AATAAA	-27	NA	106699028	106758191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.20	chr9	+	8584	22	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	55	-11	intron_retention	FALSE	canonical	3	78	junction_21	73.0955948494474	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106699127	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
ES.36072.21	chr9	+	4994	23	NIC	ENSMUSG00000040325.17	novel	4945	23	NA	NA	62	-5482	combination_of_known_junctions	FALSE	canonical	3	305	junction_10	38.197426463438	511	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTAGTGAGCTTATAGT	NA	False	NA	NA	False	NA	NA	NA	106699134	106751875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254
ES.36072.22	chr9	+	5035	26	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	64	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	118.500673415808	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106699136	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106735053_106735634_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135_106757415_106757466
ES.36072.24	chr9	+	5360	24	NNC	ENSMUSG00000040325.17	novel	4945	23	NA	NA	68	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	110.329888561617	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106699140	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106757135_106757415_106757466
ES.36072.25	chr9	+	5588	23	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	68	-14	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	87.0222850721213	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTATGGCCTTTCCT	NA	False	NA	2	True	AATAAA	-13	NA	106699140	106758177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.28	chr9	+	5073	22	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	69	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	116.528820411066	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTTTCCTTGTTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	106699141	106758185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.29	chr9	+	5333	24	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	69	204	combination_of_known_junctions	FALSE	canonical	3	304	junction_23	40.0622389135641	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCCTCATATGCT	NA	False	NA	NA	False	TATAAA	-23	NA	106699141	106757846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.3	chr9	+	5598	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-39	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	85.3350784517524	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699033	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699110_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.33	chr9	+	5618	25	NNC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	73	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	84.0237131707472	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	False	NA	16	True	AATAAA	-27	NA	106699145	106758191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757411_106757466
ES.36072.34	chr9	+	5684	24	NIC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	73	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	85.7743335438756	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699145	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.37	chr9	+	5730	26	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	126.901536633722	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699146	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106753487_106753605_106757135_106757417_106757466
ES.36072.38	chr9	+	5569	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	84.5746390191374	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699146	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740312_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.39	chr9	+	4417	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	123.898565134323	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699146	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725178_106729136_106729307_106731368_106731494_106735022_106735053_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
ES.36072.4	chr9	+	5833	26	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-38	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	126.593838712632	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCCTTGTTTTCTTTT	NA	False	NA	13	True	AATAAA	-24	NA	106699034	106758188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106703922_106704026_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.40	chr9	+	5506	23	NIC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	87.3132600004193	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699146	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.41	chr9	+	5514	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	74	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	109.027893665897	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATGGCCTTTCCTTG	NA	False	NA	4	True	AATAAA	-15	NA	106699146	106758179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740312_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.43	chr9	+	7307	8	ISM	ENSMUSG00000040325.17	ENSMUST00000159645.8	4945	23	78	35276	78	-8458	intron_retention	FALSE	canonical	3	326	junction_6	17.3487634094403	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTATATGAGTATACT	NA	False	NA	NA	False	TATAAA	-21	NA	106699150	106722366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230
ES.36072.45	chr9	+	5694	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	79	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	85.6704681411932	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTTTTCTTTTAC	NA	False	NA	15	True	AATAAA	-26	NA	106699151	106758190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716203_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.46	chr9	+	5404	23	NIC	ENSMUSG00000040325.17	novel	4945	23	NA	NA	79	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	85.1436802175695	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699151	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106757135
ES.36072.47	chr9	+	5271	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	82	205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	84.0237131707472	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGCCTCATATGCTG	NA	False	NA	NA	False	TATAAA	-24	NA	106699154	106757847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.49	chr9	+	6605	22	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	85	-7	intron_retention	FALSE	canonical	2	10	junction_15	87.1537333832027	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699157	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736979_106737577_106738252_106740264_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.5	chr9	+	5986	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.750281966633	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699041	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106699653_106699869_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.50	chr9	+	5602	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	87	-9	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_17	83.6763727088863	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCCTTTCCTTGTTT	NA	False	NA	7	True	AATAAA	-18	NA	106699159	106758182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740264_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.51	chr9	+	5552	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	88	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	108.390081290781	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699160	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740264_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.52	chr9	+	5642	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	88	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.5866887164367	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699160	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715407_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.53	chr9	+	5622	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	88	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	109.884029776852	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATGGCCTTTCCTTG	NA	False	NA	4	True	AATAAA	-15	NA	106699160	106758179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716203_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.55	chr9	+	2705	14	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	91	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.843514502614	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106699163	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706339_106736015_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.56	chr9	+	5246	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	91	198	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_24	84.0237131707472	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGTTTTGTTGCCTCA	NA	False	NA	NA	False	TATAAA	-17	NA	106699163	106757840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757410_106757468
ES.36072.58	chr9	+	5758	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	93	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	109.765374777295	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATGGCCTTTCCTTGTT	NA	False	NA	6	True	AATAAA	-17	NA	106699165	106758181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106753487_106753605_106757135
ES.36072.59	chr9	+	5062	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	94	-9	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_14	82.2617667199586	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCCTTTCCTTGTTT	NA	False	NA	7	True	AATAAA	-18	NA	106699166	106758182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106735053_106735634_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.60	chr9	+	5138	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	94	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	121.822096780054	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106699166	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731490_106735022_106735053_106735549_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
ES.36072.61	chr9	+	2856	8	ISM	ENSMUSG00000040325.17	ENSMUST00000159645.8	4945	23	94	39711	94	-12893	5prime_fragment	FALSE	canonical	3	326	junction_6	17.3487634094403	417	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTATTTATTTATT	NA	False	NA	NA	False	AATAAA	-26	NA	106699166	106717931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230
ES.36072.62	chr9	+	4990	23	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	96	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	114.441330741206	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106699168	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715569_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.64	chr9	+	2948	15	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	105	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	141.665962383203	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699177	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708143_106735882_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757413_106757466
ES.36072.65	chr9	+	5307	24	NIC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	109	203	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	102.460559980935	518	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTGCCTCATATGC	NA	False	NA	NA	False	TATAAA	-22	NA	106699181	106757845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757135
ES.36072.66	chr9	+	5971	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	110	-10	intron_retention	FALSE	non_canonical	0	0	junction_23	100.976629836596	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATGGCCTTTCCTTGTT	NA	False	NA	6	True	AATAAA	-17	NA	106699182	106758181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135_106757415_106757466
ES.36072.67	chr9	+	5499	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	112	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	111.945605208601	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699184	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.71	chr9	+	5399	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	134	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	129.455030473651	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699206	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742903_106751254_106751508_106757132_106757415_106757466
ES.36072.72	chr9	+	5593	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	134	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	85.6704681411932	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATGGCCTTTCCTTGTT	NA	False	NA	6	True	AATAAA	-17	NA	106699206	106758181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716240_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ES.36072.73	chr9	+	5615	25	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	329	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	121.694517360297	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106699401	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699550_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135_106757415_106757466
ES.36072.74	chr9	+	5639	24	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	111.874524637023	517	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCCTTTCCTTGTTT	NA	False	NA	7	True	AATAAA	-18	NA	106706257	106758182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106753487_106753605_106757132
ES.36072.77	chr9	+	6803	4	ISM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	10527	26787	10527	26	internal_fragment	FALSE	canonical	3	305	junction_2	39.3022476032436	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTGGGCAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	106716794	106730850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_106721494_106723857_106724038_106724979_106725190_106729136
ES.36072.78	chr9	+	3384	15	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	-2975	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	141.977164734764	510	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTATGGCCTTTCCTTGT	NA	False	NA	5	True	AATAAA	-16	NA	106725109	106758180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106725190_106729136_106729307_106731368_106731494_106735022_106735805_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757417_106757466
ES.36072.79	chr9	+	3786	14	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	1051	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	111.758774459275	510	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106729135	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757413_106757466
ES.36072.8	chr9	+	5692	25	NNC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	84.0237131707472	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	False	NA	16	True	AATAAA	-27	NA	106699075	106758191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757415_106757466
ES.36072.80	chr9	+	2243	1	NIC	ENSMUSG00000040325.17	novel	4945	23	NA	NA	1445	948	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106729529	106731772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106729500_106731800
ES.36072.81	chr9	+	5143	11	NNC	ENSMUSG00000040325.17	novel	4967	23	NA	NA	5779	-7	intron_retention	FALSE	non_canonical	0	0	junction_10	126.947233132511	508	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106733863	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132_106757413_106757466
ES.36072.83	chr9	+	6528	5	Fusion	ENSMUSG00000103835.2_ENSMUSG00000040325.17	novel	275	2	NA	NA	-2832	-7	intron_retention	TRUE	non_canonical	0	0	junction_1	131.635861375235	506	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCTTTCCTTGTTTTC	NA	False	NA	9	True	AATAAA	-20	NA	106745040	106758184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_106748003_106748873_106750546_106750615_106751508_106757132_106757417_106757466
ES.36072.84	chr9	+	1950	4	NNC	ENSMUSG00000040325.17	novel	275	2	NA	NA	-962	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.306974320474	506	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106750492	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106750524_106750591_106751508_106757132_106757419_106757466
ES.36072.86	chr9	+	5817	2	NNC	ENSMUSG00000040325.17	novel	275	2	NA	NA	860	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	502	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106752314	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_106757415_106757466
ES.36072.87	chr9	+	4313	1	NIC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	2416	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCTTTCCTTGTTTT	NA	False	NA	8	True	AATAAA	-19	NA	106753870	106758183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_106753900_106758200
ES.36073.1	chr9	-	1615	1	Antisense	novelGene_ENSMUSG00000040325.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	106699717	106698102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_106698100_106699700
ES.36074.1	chr9	-	2998	13	NNC	ENSMUSG00000032575.17	novel	545	5	NA	NA	31770	9580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	106735712	106705930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106706375_106708054_106708133_106711346_106711420_106712712_106712827_106713754_106713897_106715396_106715906_106716228_106716331_106721332_106721494_106723857_106724037_106724978_106725188_106729134_106729305_106731366_106731491_106735019
ES.36074.2	chr9	-	162	1	Intergenic	novelGene_29347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	106708359	106708197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106708200_106708400
ES.36074.3	chr9	-	206	1	Intergenic	novelGene_29348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATATAGCCCCAAAT	NA	False	NA	NA	False	NA	NA	NA	106719408	106719202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106719200_106719400
ES.36075.1	chr9	-	1276	2	Antisense	novelGene_ENSMUSG00000103835.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106749449	106748001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_106748553_106748724
ES.36076.1	chr9	-	1942	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	5136	-567	3327	567	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATGTTTGTTTTTCCCT	NA	False	NA	NA	False	AGTAAA	-39	NA	106759491	106757549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106757500_106759500
ES.36076.10	chr9	-	2955	2	NNC	ENSMUSG00000074102.5	novel	682	2	NA	NA	321	764	intron_retention	FALSE	non_canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCGCCAGAGTCCTGGT	NA	False	NA	-11	True	AGTAAA	-25	NA	106764306	106761185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106763441_106763606
ES.36076.11	chr9	-	3037	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	297	3177	297	656	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGATTCTGTCTGCTGT	NA	False	NA	-119	True	AAGAAA	-16	NA	106764330	106761293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106761300_106764300
ES.36076.12	chr9	-	2804	2	NNC	ENSMUSG00000074102.5	novel	682	2	NA	NA	364	656	intron_retention	FALSE	non_canonical	0	0	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGATTCTGTCTGCTGT	NA	False	NA	-119	True	AAGAAA	-16	NA	106764263	106761293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106763445_106763610
ES.36076.13	chr9	-	2424	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	299	3788	299	45	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGCTGACCCAGCTAAA	NA	False	NA	NA	False	NA	NA	NA	106764328	106761904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106761900_106764300
ES.36076.14	chr9	-	1513	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	9	725	9	613	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTCGTCTTAGCTAT	NA	False	NA	NA	False	NA	NA	NA	106769169	106765338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ES.36076.15	chr9	-	899	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	9	1339	9	-1	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCACAGTATTCTGTC	NA	False	NA	-12	True	ATTAAA	-23	NA	106769169	106765952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ES.36076.2	chr9	-	2069	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	4763	-321	2954	321	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATGAAACCACGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	106759864	106757795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106757800_106759900
ES.36076.3	chr9	-	6262	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	251	-2	251	2	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGATTTGTAATTTCCA	NA	False	NA	42	True	AATAAA	-25	NA	106764376	106758114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106758100_106764400
ES.36076.4	chr9	-	5765	2	NNC	ENSMUSG00000074102.5	novel	682	2	NA	NA	273	0	intron_retention	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGATTTGTAATTTC	NA	False	NA	40	True	AATAAA	-23	NA	106764354	106758116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106763824_106764296
ES.36076.5	chr9	-	6433	2	Fusion	ENSMUSG00000032575.17_ENSMUSG00000074102.5	novel	682	2	NA	NA	-51	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGATTTGTAATTTC	NA	False	NA	40	True	AATAAA	-23	NA	106764678	106758116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_106764070_106764198
ES.36076.6	chr9	-	3476	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	340	2695	340	1138	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTTCAGTTGTGTAGT	NA	False	NA	NA	False	TATAAA	-18	NA	106764287	106760811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106760800_106764300
ES.36076.7	chr9	-	5698	4	FSM	ENSMUSG00000074102.5_ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	38	-3489	-24	825	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGCCGTATGTCATGTT	NA	False	NA	50	True	NA	NA	NA	106769140	106761124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ES.36076.8	chr9	-	2935	2	NNC	ENSMUSG00000074102.5	novel	682	2	NA	NA	346	770	intron_retention	FALSE	non_canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTCCTGGTTTAATC	NA	False	NA	-5	True	AGTAAA	-31	NA	106764281	106761179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106763446_106763612
ES.36076.9	chr9	-	2816	3	NNC	ENSMUSG00000074102.5	novel	682	2	NA	NA	364	764	intron_retention	FALSE	non_canonical	0	0	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCGCCAGAGTCCTGGT	NA	False	NA	-11	True	AGTAAA	-25	NA	106764263	106761185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106763232_106763316_106763818_106763994
ES.36077.1	chr9	+	176	1	Intergenic	novelGene_29352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAAAGCTATTG	NA	False	NA	NA	False	NA	NA	NA	107071308	107071484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107071300_107071500
ES.36078.1	chr9	+	4291	1	Intergenic	novelGene_29353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACAAAACCAGGATCTG	NA	False	NA	NA	False	NA	NA	NA	107073468	107077759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107073500_107077800
ES.36078.2	chr9	+	182	1	Intergenic	novelGene_29354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	107075379	107075561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107075400_107075600
ES.36079.1	chr9	-	8863	51	NIC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	-19	-1	intron_retention	TRUE	canonical	0	0	junction_29	2.77820085666965	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTGATTTCACTGAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	107109086	106770024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106773103_106773934_106774018_106774533_106774657_106777905_106777994_106778969_106779089_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809207_106810173_106810323_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.10	chr9	-	10818	30	NIC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	-15	2329	intron_retention	FALSE	canonical	0	0	junction_7	2.97512477381007	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGGGAGAGATGTT	NA	False	NA	NA	False	NA	NA	NA	107109082	106818801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.11	chr9	-	179	1	Intergenic	novelGene_29350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106855270	106855091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106855100_106855300
ES.36079.12	chr9	-	152	1	Intergenic	novelGene_29351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	106897753	106897601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106897600_106897800
ES.36079.13	chr9	-	5302	8	NIC	ENSMUSG00000039716.13	novel	5440	9	NA	NA	6	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.61403161162101	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATCTGCCA	NA	False	NA	NA	False	NA	NA	NA	107109049	106928285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.2	chr9	-	8962	52	NNC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	-15	-4	intron_retention	TRUE	canonical	0	0	junction_2	2.88055165804595	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCCACTGATTTCACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	107109082	106770027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106773103_106773934_106774018_106777905_106777994_106778969_106779089_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809207_106810173_106810321_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106959573_106959723_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.3	chr9	-	9057	53	NNC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	-5	-6	intron_retention	FALSE	canonical	0	0	junction_29	2.7079217560126	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGATCCACTGATTTCAC	NA	False	NA	NA	False	ATTAAA	-14	NA	107109072	106770029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106773103_106773934_106774018_106774533_106774657_106777905_106777994_106778969_106779071_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809207_106810173_106810323_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106959573_106959723_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.4	chr9	-	4776	8	NIC	ENSMUSG00000039716.13	novel	3947	12	NA	NA	1788	-7	intron_retention	FALSE	canonical	1	1	junction_5	2.1380899352994	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGATCCACTGATTTCA	604	False	NA	NA	False	ATTAAA	-13	NA	106788565	106770030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106774018_106774533_106774657_106777905_106777994_106778969_106779089_106783831_106783914_106784428_106784568_106785614_106785737_106788449
ES.36079.5	chr9	-	8500	51	NIC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.79885690952574	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTGTGCTTATTTAAA	NA	False	NA	-3	True	TATAAA	-18	NA	107109044	106770304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106773103_106773934_106774018_106777905_106777994_106778969_106779089_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809207_106810173_106810323_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.6	chr9	-	4001	11	NIC	ENSMUSG00000039716.13	novel	3947	12	NA	NA	804	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	1.85741756210067	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTGTGCTTATTTAAA	NA	False	NA	-3	True	TATAAA	-18	NA	106789549	106770304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_106773103_106773934_106774018_106774533_106774657_106777905_106777994_106778969_106779089_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369
ES.36079.7	chr9	-	8651	52	NNC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.89187436307241	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTCTGTGCTTATTTA	NA	False	NA	-5	True	TATAAA	-16	NA	107109054	106770306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106773103_106773934_106774018_106777905_106777994_106778969_106779089_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809205_106810173_106810323_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106959573_106959723_106985558_106985652_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.8	chr9	-	8638	52	NNC	ENSMUSG00000039716.13	novel	9063	53	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	2.74285622745815	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCATTCTGTGCTTATT	NA	False	NA	-7	True	TATAAA	-14	NA	107109081	106770308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_106773103_106773934_106774018_106774533_106774657_106777905_106777994_106778969_106779071_106783831_106783980_106784428_106784568_106785614_106785737_106788449_106788567_106788688_106788773_106789369_106789550_106790094_106790182_106790305_106790473_106791722_106791865_106807218_106807324_106809119_106809207_106810173_106810323_106815099_106815194_106815316_106815378_106818481_106818578_106821105_106821192_106829510_106829660_106832502_106832562_106832815_106832917_106833276_106833353_106835605_106835701_106841905_106842005_106844317_106844423_106846951_106847080_106850952_106851146_106855802_106855974_106863192_106863275_106866606_106866708_106868281_106868366_106870165_106870264_106870593_106870766_106871253_106871361_106872018_106872182_106874092_106874218_106882529_106882656_106883989_106884079_106900926_106901075_106902519_106902581_106909474_106909557_106932648_106932804_106933321_106933364_106939197_106939283_106985558_106985656_107011985_107012042_107036613_107036655_107056279_107056364_107108670
ES.36079.9	chr9	-	181	1	Intergenic	novelGene_29349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTATTGCAC	NA	False	NA	NA	False	NA	NA	NA	106794448	106794267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_106794300_106794400
ES.3608.1	chr10	-	786	1	ISM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	72120	1390	10811	-1390	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATGCATTCCTACCA	NA	False	NA	NA	False	AATAAA	-22	NA	93799559	93798773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93798800_93799600
ES.36080.1	chr9	+	184	1	Intergenic	novelGene_29355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTATTGCACAA	NA	False	NA	NA	False	NA	NA	NA	107131148	107131332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107131100_107131300
ES.36081.1	chr9	+	160	1	Intergenic	novelGene_29356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	107150925	107151085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107150900_107151100
ES.36082.1	chr9	-	2700	11	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.9524423672347	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGTTTCTTTATGT	NA	False	NA	-2	True	AATAAA	-24	NA	107166951	107132125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107133535_107134260_107134342_107134613_107134709_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.12	chr9	-	3968	9	NIC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	29	1	intron_retention	FALSE	canonical	3	157	junction_8	25.330009376232	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107167047	107132132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107133535_107134260_107134342_107134613_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.13	chr9	-	2067	5	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.2457791282298	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107167047	107132132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135982_107167002
ES.36082.17	chr9	-	2714	10	NIC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	30	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_7	64.0828938481294	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGATTCCTGGGTTTC	NA	False	NA	-9	True	AATAAA	-17	NA	107167046	107132132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107140823_107140964_107166318_107166596_107166723
ES.36082.18	chr9	-	2594	10	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.6207806194465	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107166952	107132133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107133535_107134260_107134342_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
ES.36082.19	chr9	-	2532	11	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.9095346191361	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107166929	107132133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
ES.36082.20	chr9	-	3130	10	NIC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	37	0	intron_retention	FALSE	canonical	3	157	junction_9	24.2761886080442	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107167039	107132133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.21	chr9	-	2644	13	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.3827271697937	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAATGATTCCTGGGTT	NA	False	NA	-11	True	AATAAA	-15	NA	107167009	107132134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132391_107132447_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.22	chr9	-	2608	13	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.9348900220682	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTTTTCAATGATTC	NA	False	NA	-18	True	AATAAA	-8	NA	107166978	107132141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132251_107132301_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
ES.36082.23	chr9	-	176	1	Intergenic	novelGene_29357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	107161169	107160993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_107161000_107161200
ES.36082.24	chr9	-	5113	1	NIC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-12	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAATTTTGGCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	107166990	107161877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107161900_107167000
ES.36082.25	chr9	-	1049	3	FSM	ENSMUSG00000032577.17	ENSMUST00000141596.2	1000	3	-54	5	44	-5	multi-exon	FALSE	canonical	0	0	junction_1	78.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAATTTTGGCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	107167032	107161877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107162341_107166318_107166596_107166723
ES.36082.3	chr9	-	2849	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	-33	0	-33	0	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGTTTCTTTATGT	NA	False	NA	-2	True	AATAAA	-24	NA	107167109	107132125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.5	chr9	-	2740	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	33	4	at_least_one_novel_splicesite	TRUE	canonical	3	142	junction_1	26.8365114556165	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTCCTGGGTTTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	107167043	107132129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.6	chr9	-	2657	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-5	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.447539980076	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATTCCTGGGTTTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	107166951	107132129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134709_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36082.9	chr9	-	2717	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	-44	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.0594746552762	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGATTCCTGGGTTTCT	NA	False	NA	-8	True	AATAAA	-18	NA	107167022	107132131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107132522_107132560_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ES.36083.1	chr9	+	2149	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	675	26	-9	18	multi-exon	FALSE	canonical	1	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGCCTTCAGTGGGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	107173899	107179160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107174234_107177122_107177344_107177566
ES.36084.1	chr9	-	6702	10	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	6	4890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.2675819912849	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGCCTCAAGTCTGTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	107215543	107199392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215475
ES.36084.11	chr9	-	5895	8	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-5	7	intron_retention	FALSE	canonical	3	10	junction_7	58.3284157305224	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	-23	True	AATAAA	-1	NA	107215505	107204901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107213472_107213770_107213863_107215479
ES.36084.12	chr9	-	6452	9	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-9	7	intron_retention	FALSE	canonical	3	133	junction_7	19.2609546751972	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	-23	True	AATAAA	-1	NA	107215540	107204901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107213472_107213770_107213863_107214199_107214578_107215479
ES.36084.13	chr9	-	2693	13	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-2058	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	76.4493296242681	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCCAGTATTTTGTT	NA	False	NA	-23	True	AATAAA	-1	NA	107217607	107204901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107214751_107215735_107217261_107217296_107217434
ES.36084.14	chr9	-	1436	8	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.1936644492086	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215496	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107208643_107208779_107213770_107213994_107214199_107214578_107215479
ES.36084.15	chr9	-	1597	11	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	55.3173571313742	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215540	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213902_107214199_107214578_107215479
ES.36084.16	chr9	-	1207	9	NNC	ENSMUSG00000032579.15	novel	1888	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	74.1922123608671	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215530	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213770_107213994_107215479
ES.36084.17	chr9	-	1526	11	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	53.3310416174295	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215546	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214237_107214578_107215479
ES.36084.18	chr9	-	1092	9	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	72.7113299286982	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215546	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213770_107213863_107215479
ES.36084.19	chr9	-	1045	9	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	75.3847423223029	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGGTGAGCCAGTAT	NA	False	NA	-29	True	AGTAAA	-14	NA	107215540	107204907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107213377_107213472_107213770_107213863_107215479
ES.36084.22	chr9	-	1214	10	NNC	ENSMUSG00000032579.15	novel	1888	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.2675819912849	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAATAAATGGTGAGCC	NA	False	NA	-34	True	AGTAAA	-9	NA	107215540	107204912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213902_107215479
ES.36084.23	chr9	-	2265	2	NIC	ENSMUSG00000032579.15	novel	1619	4	NA	NA	7	1	intron_retention	FALSE	canonical	3	151	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	107215509	107212342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107214578_107215479
ES.36084.3	chr9	-	2277	12	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	68.9271983884878	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGCCTCTTTTCACG	NA	False	NA	NA	False	NA	NA	NA	107215531	107204282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107214751_107214855_107215479
ES.36084.4	chr9	-	4297	9	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	4	-6	intron_retention	FALSE	canonical	3	133	junction_7	23.0162985729678	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGGACTGCCTCTT	NA	False	NA	NA	False	NA	NA	NA	107215527	107204288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205489_107205633_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ES.36084.8	chr9	-	1211	10	NIC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	7	12	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	55.2618905142583	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCATGGGCCCTCGTT	NA	False	NA	0	True	AATAAA	-24	NA	107215542	107204878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107215479
ES.36084.9	chr9	-	1616	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	-31	607	-31	1	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTATTAACATTCAT	NA	False	NA	-11	True	AATAAA	-13	NA	107215580	107204889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ES.36085.1	chr9	+	2681	6	FSM	ENSMUSG00000037977.7	ENSMUST00000042581.4	2599	6	-87	5	-87	-5	multi-exon	FALSE	canonical	1	2	junction_1	1.32664991614216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATTGGAGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-23	NA	107217713	107226886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107217988_107218509_107218617_107219405_107219789_107223344_107223371_107224016_107224165_107225143
ES.36085.2	chr9	+	1622	6	FSM	ENSMUSG00000037977.7	ENSMUST00000042581.4	2599	6	-81	1058	-81	-1058	multi-exon	FALSE	canonical	1	2	junction_1	1.32664991614216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGCAGCTAGAGCAGCGC	NA	False	NA	NA	False	NA	NA	NA	107217719	107225833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107217988_107218509_107218617_107219405_107219789_107223344_107223371_107224016_107224165_107225143
ES.36086.1	chr9	+	5570	38	NIC	ENSMUSG00000010066.16	novel	5183	39	NA	NA	-55	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.42792374934873	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCTATCCACTGTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	107277023	107406545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107277483_107303251_107303334_107342751_107342869_107374658_107374719_107383146_107383192_107386393_107386536_107389199_107389332_107389501_107389560_107390252_107390304_107390431_107390532_107390671_107390831_107391033_107391142_107391243_107391323_107391830_107391881_107392058_107392149_107392349_107392422_107392617_107392693_107394293_107394369_107394449_107394522_107394611_107394684_107394789_107394852_107395391_107395469_107399321_107399383_107401293_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404352_107404436_107404519
ES.36086.2	chr9	+	5542	38	NIC	ENSMUSG00000010066.16	novel	5807	39	NA	NA	-26	-2	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	2.18568287774657	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCAGTTTCTATCCAC	NA	False	NA	NA	False	ATTAAA	-20	NA	107277052	107406540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107277483_107303251_107303334_107342751_107342869_107374658_107374719_107383146_107383192_107386393_107386536_107389199_107389332_107389501_107389560_107390252_107390304_107390431_107390532_107390671_107390831_107391033_107391142_107391243_107391323_107391830_107391881_107392058_107392149_107392349_107392422_107392617_107392693_107394293_107394369_107394449_107394522_107394611_107394684_107394789_107394852_107395391_107395469_107399321_107399383_107401293_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404346_107404436_107404519
ES.36086.3	chr9	+	6021	14	NIC	ENSMUSG00000010066.16	novel	5183	39	NA	NA	-24	-2	intron_retention	FALSE	canonical	0	0	junction_2	3.13785816221094	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACCAGTTTCTATCCAC	NA	False	NA	NA	False	ATTAAA	-20	NA	107398686	107406540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107404014_107404135_107404246_107404352_107404436_107404519
ES.36086.4	chr9	+	3509	15	ISM	ENSMUSG00000010066.16	ENSMUST00000085092.12	5183	39	123978	-353	2346	3	3prime_fragment	FALSE	canonical	0	0	junction_2	3.03466368374971	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCTATCCACTGTGT	1003	False	NA	NA	False	ATTAAA	-25	NA	107401056	107406545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404352_107404436_107404519
ES.36086.5	chr9	+	3259	15	NNC	ENSMUSG00000010066.16	novel	5183	39	NA	NA	-2558	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	3.1943828249997	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTCTATCCACTGTGT	1244	False	NA	NA	False	ATTAAA	-25	NA	107401297	107406545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403895_107404014_107404135_107404246_107404352_107404436_107404519
ES.36087.1	chr9	-	160	1	Intergenic	novelGene_29358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAATATATTTAAG	NA	False	NA	NA	False	NA	NA	NA	107410474	107410314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_107410300_107410500
ES.36088.1	chr9	+	2148	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	68	-22	68	22	multi-exon	FALSE	canonical	3	142	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATCAGATGCAAAGTTA	NA	False	NA	55	True	NA	NA	NA	107411211	107415894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107412529_107415063
ES.36088.2	chr9	+	4585	1	NIC	ENSMUSG00000010045.3	novel	2194	2	NA	NA	121	-23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTCCTGGGCTCCGTC	NA	False	NA	10	True	AATAAA	-15	NA	107411264	107415849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107411300_107415800
ES.36089.1	chr9	-	1454	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	51	-343	-15	-225	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAGAAATTTGCCTTC	NA	False	NA	NA	False	NA	NA	NA	107419341	107416430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ES.36089.2	chr9	-	1121	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	61	-20	-5	20	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGAGGATGGTTCTTG	NA	False	NA	0	True	AATAAA	-39	NA	107419331	107416753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ES.36089.3	chr9	-	1140	4	FSM	ENSMUSG00000037190.13	ENSMUST00000194967.2	658	4	-19	-463	-19	2	multi-exon	FALSE	canonical	3	15	junction_2	45.536310297998	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGTCGGGAGGAGCA	NA	False	NA	-24	True	AATAAA	-15	NA	107419345	107416777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
ES.3609.1	chr10	+	7759	5	Antisense	novelGene_ENSMUSG00000036099.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAACCGCCCAAACATGT	NA	False	NA	NA	False	NA	NA	NA	93808686	93838613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_93809904_93810305_93810407_93816174_93816370_93820023_93820354_93832697
ES.36090.1	chr9	+	1449	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	-10	2	-10	-2	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTACTGCTTCAG	NA	False	NA	11	True	AATAAA	-22	NA	107419414	107422903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ES.36090.4	chr9	+	1647	10	NNC	ENSMUSG00000010057.9	novel	1441	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	1	2	junction_7	38.1226092146555	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTACTGCTTCAG	NA	False	NA	11	True	AATAAA	-22	NA	107419433	107422903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421838_107421945_107422040_107422112_107422587_107422689
ES.36090.5	chr9	+	1747	9	FSM	ENSMUSG00000010057.9	ENSMUST00000193628.6	1736	9	-2	-9	2	-2	multi-exon	FALSE	canonical	3	98	junction_4	11.1235954169504	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTACTGCTTCAG	NA	False	NA	11	True	AATAAA	-22	NA	107419441	107422903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422040_107422112_107422587_107422689
ES.36090.6	chr9	+	1529	10	NIC	ENSMUSG00000010057.9	novel	1441	11	NA	NA	3	-2	intron_retention	FALSE	canonical	3	98	junction_4	10.6770782520313	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTACTGCTTCAG	NA	False	NA	11	True	AATAAA	-22	NA	107419446	107422903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422040_107422112_107422231_107422443_107422587_107422689
ES.36090.7	chr9	+	1814	8	NIC	ENSMUSG00000010057.9	novel	1736	9	NA	NA	3	-3	intron_retention	FALSE	canonical	3	98	junction_4	11.7594946441467	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTGAGTACTGCTTCA	NA	False	NA	10	True	AATAAA	-21	NA	107419446	107422902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107422587_107422689
ES.36090.8	chr9	+	1484	10	NNC	ENSMUSG00000010057.9	novel	1441	11	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.2072681596564	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAATATTGAGTACTGC	NA	False	NA	6	True	AATAAA	-17	NA	107419449	107422898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421833_107422040_107422112_107422231_107422443_107422587_107422689
ES.36091.1	chr9	+	2240	10	NIC	ENSMUSG00000010044.13	novel	1765	12	NA	NA	0	-6	intron_retention	TRUE	canonical	1	1	junction_1	1.87247772737252	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCAACAGTGTGGCGCT	NA	False	NA	NA	False	AATAAA	-12	NA	107424502	107428512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426664_107426766_107427073_107427609_107427696_107427819_107427938_107428065_107428159
ES.36091.2	chr9	+	1987	4	NIC	ENSMUSG00000010044.13	novel	1383	10	NA	NA	-135	-2	intron_retention	FALSE	canonical	1	2	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGTGTGGCGCTGTAC	NA	False	NA	NA	False	AATAAA	-16	NA	107426226	107428516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107427609_107427696_107427819_107427938_107428065_107428159
ES.36092.1	chr9	+	1418	5	FSM	ENSMUSG00000010067.14	ENSMUST00000156198.8	1641	5	227	-4	227	0	multi-exon	FALSE	canonical	0	0	junction_1	25.743931323712	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTCTATAGATGTG	NA	False	NA	13	True	AATAAA	-20	NA	107429015	107439466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107429046_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ES.36092.2	chr9	+	1785	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	-53	-5	-53	1	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACTCTATAGATGTGG	NA	False	NA	14	True	AATAAA	-21	NA	107431728	107439467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ES.36092.3	chr9	+	4210	4	FSM	ENSMUSG00000010067.14	ENSMUST00000144129.2	2094	4	-2119	3	41	-3	multi-exon	FALSE	canonical	3	50	junction_3	6.53197264742181	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTTTGGACTCTAT	NA	False	NA	6	True	AATAAA	-13	NA	107431822	107439459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107434757_107434968_107435267_107435385_107435502_107438597
ES.36093.1	chr9	+	3590	2	NIC	ENSMUSG00000010054.5	novel	1665	3	NA	NA	-883	-1	intron_retention	FALSE	canonical	3	251	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	False	NA	19	True	AATAAA	-20	NA	107439570	107443310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107441896_107442045
ES.36093.2	chr9	+	1687	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	-23	1	-23	-1	multi-exon	FALSE	canonical	3	242	junction_1	4.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	False	NA	19	True	AATAAA	-20	NA	107440430	107443310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107440732_107441774_107441896_107442045
ES.36093.3	chr9	+	1463	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	-7	209	-7	-209	multi-exon	FALSE	canonical	3	242	junction_1	4.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGAAGGTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	107440446	107443102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107440732_107441774_107441896_107442045
ES.36093.4	chr9	+	1639	3	FSM	ENSMUSG00000010054.5	ENSMUST00000193418.2	410	3	-114	-1115	1	-1	multi-exon	FALSE	canonical	1	2	junction_2	120	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	False	NA	19	True	AATAAA	-20	NA	107440454	107443310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107440732_107441774_107441872_107442045
ES.36093.5	chr9	+	607	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	2	1056	2	60	multi-exon	FALSE	canonical	3	242	junction_1	4.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGGTTGTCCCTCAGT	NA	False	NA	28	True	AATAAA	-33	NA	107440455	107442255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107440732_107441774_107441896_107442045
ES.36093.6	chr9	+	1732	4	NNC	ENSMUSG00000010054.5	novel	1665	3	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	113.067334903686	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	False	NA	19	True	AATAAA	-20	NA	107440464	107443310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107440732_107441066_107441146_107441774_107441896_107442045
ES.36094.1	chr9	+	1832	4	NIC	ENSMUSG00000010047.13	novel	2062	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	101.301530097033	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTGTCTTTTTCTGC	NA	False	NA	15	True	ATTAAA	-17	NA	107445119	107449975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107445176_107447302_107448270_107448690_107448781_107449256
ES.36094.2	chr9	+	2116	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	-221	-2	-221	-1	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTTCTGCTT	NA	False	NA	17	True	ATTAAA	-19	NA	107446094	107449977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ES.36094.3	chr9	+	2764	3	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	-20	-15	intron_retention	FALSE	canonical	3	208	junction_2	7.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAACAACTCCTGT	NA	False	NA	-4	True	NA	NA	NA	107446295	107449956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107448270_107448690_107448781_107449256
ES.36094.4	chr9	+	1908	4	NNC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	7	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	105.359701341009	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAACAACTCCTGT	NA	False	NA	-4	True	NA	NA	NA	107446322	107449956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107446433_107447302_107448270_107448690_107448822_107449256
ES.36094.5	chr9	+	2341	3	FSM	ENSMUSG00000010047.13	ENSMUST00000193747.2	1532	3	-15	-794	9	-15	multi-exon	FALSE	canonical	3	223	junction_2	0.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAACAACTCCTGT	NA	False	NA	-4	True	NA	NA	NA	107446324	107449956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107446433_107447302_107448270_107448690
ES.36094.6	chr9	+	1960	4	NIC	ENSMUSG00000010047.13	novel	1893	4	NA	NA	86	-15	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.360461448831	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAACAACTCCTGT	NA	False	NA	-4	True	NA	NA	NA	107446425	107449956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107446629_107447302_107448270_107448690_107448781_107449256
ES.36095.1	chr9	+	4327	2	ISM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	-6	-11	-6	11	intron_retention	FALSE	canonical	3	34	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454119	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107454278_107454751
ES.36095.10	chr9	+	2183	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	0	831	0	585	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAACCAACCAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	107454156	107457346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ES.36095.11	chr9	+	3455	3	NIC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	3	-30	intron_retention	FALSE	canonical	3	13	junction_2	11.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCTCACATGCTGCCC	NA	False	NA	1	True	NA	NA	NA	107454159	107458147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107455676_107456079_107456170_107456298
ES.36095.12	chr9	+	1175	6	Fusion	ENSMUSG00000010051.16_ENSMUSG00000036091.9	novel	843	4	NA	NA	6	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	13.3626344707921	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTGTCCTCACC	NA	False	NA	10	True	CATAAA	-15	NA	107454162	107464551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107454278_107455526_107455676_107456079_107456170_107463580_107463671_107463773_107464388_107464434
ES.36095.13	chr9	+	4660	4	NIC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	8	2329	intron_retention	FALSE	canonical	3	8	junction_3	12.1928941054479	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGGTATGGCTGTGACA	NA	False	NA	1	True	AATAAA	-7	NA	107454164	107461238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107455676_107456079_107456170_107456298_107458135_107460015
ES.36095.14	chr9	+	2719	5	NNC	ENSMUSG00000010051.16	novel	2706	5	NA	NA	9	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.9895797139213	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454165	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107456606_107457634
ES.36095.15	chr9	+	2229	7	NNC	ENSMUSG00000010051.16	novel	2706	5	NA	NA	13	5641	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	14.6704540564436	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTTTGTCCTCAC	NA	False	NA	9	True	CATAAA	-14	NA	107454169	107464550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107456585_107463580_107463671_107463773_107464389_107464434
ES.36095.16	chr9	+	5563	5	NNC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	13	2338	intron_retention	FALSE	non_canonical	0	0	junction_4	14.9895797139213	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTGG	NA	False	NA	10	True	AATAAA	-16	NA	107454169	107461247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107459314_107459821
ES.36095.17	chr9	+	3633	5	NNC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	-4	11	intron_retention	FALSE	canonical	0	0	junction_2	14.9895797139213	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454184	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107454278_107454751_107455431_107455526_107455676_107456079_107456170_107456298
ES.36095.18	chr9	+	3473	2	ISM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	918	-11	855	11	intron_retention	FALSE	canonical	3	36	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107455043	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107455676_107456079
ES.36095.19	chr9	+	1127	3	NIC	ENSMUSG00000036091.9	novel	1380	4	NA	NA	-136	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3.5	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTCCTCACCATTCT	NA	False	NA	15	True	CATAAA	-20	NA	107457880	107464556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107458135_107463580_107463671_107463773
ES.36095.2	chr9	+	4238	5	NIC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	-6	2336	intron_retention	FALSE	canonical	3	8	junction_4	12.3970762682174	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTGACAGTTTATT	NA	False	NA	8	True	AATAAA	-14	NA	107454119	107461245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107458135_107460015
ES.36095.20	chr9	+	1451	2	NNC	ENSMUSG00000079334.9	novel	2053	2	NA	NA	572	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	75	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGTGACAGTTTATTG	NA	False	NA	9	True	AATAAA	-15	NA	107457887	107461246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107458135_107460042
ES.36095.21	chr9	+	3543	3	NNC	ENSMUSG00000036091.9	novel	1830	4	NA	NA	-1092	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	4.5	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTGTCCTCACC	NA	False	NA	10	True	CATAAA	-15	NA	107460858	107464551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107463671_107463773_107464388_107464434
ES.36095.22	chr9	+	1733	3	ISM	ENSMUSG00000036091.9	ENSMUST00000040059.9	1830	4	3505	7	49	-7	3prime_fragment	FALSE	canonical	2	4	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAGTTTGTCCTCACC	NA	False	NA	10	True	CATAAA	-15	NA	107461999	107464551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107462865_107463580_107463671_107463773
ES.36095.3	chr9	+	3788	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-31	-743	0	11	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454125	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ES.36095.4	chr9	+	3729	4	NNC	ENSMUSG00000010051.16	novel	3014	4	NA	NA	-2	10	intron_retention	FALSE	canonical	0	0	junction_2	16.5193489244852	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGCAGTGGAGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	107454134	107458919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107454278_107454751_107455349_107455526_107455676_107456079
ES.36095.5	chr9	+	3007	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-19	26	1	-26	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCACATGCTGCCCGTTT	NA	False	NA	5	True	NA	NA	NA	107454137	107458151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ES.36095.6	chr9	+	2412	4	NIC	ENSMUSG00000010051.16	novel	2706	5	NA	NA	8	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.5193489244852	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454144	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107454278_107454751_107455676_107456079_107456170_107457655
ES.36095.7	chr9	+	2695	5	FSM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	22	-11	-9	11	multi-exon	FALSE	canonical	2	4	junction_4	13.6450540489952	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454147	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107456585_107457655
ES.36095.8	chr9	+	6086	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	-3	-3069	-3	2337	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTGTGACAGTTTATTG	NA	False	NA	9	True	AATAAA	-15	NA	107454153	107461246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ES.36095.9	chr9	+	2982	4	FSM	ENSMUSG00000010051.16_ENSMUSG00000036091.9	ENSMUST00000123005.8	843	4	20	-2159	0	11	multi-exon	FALSE	canonical	0	0	junction_1	14.8847423745107	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCAGTGGAGTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	107454156	107458920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107454278_107455526_107455676_107456079_107456170_107456298
ES.36096.1	chr9	+	4630	6	NNC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	-9	1	intron_retention	FALSE	non_canonical	0	0	junction_5	285.86528295685	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464831	107470238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107467222_107467307_107467393_107467496_107468310_107468400_107468507_107468766_107469038_107469273
ES.36096.10	chr9	+	2082	11	ISM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	77	0	-7	0	intron_retention	FALSE	canonical	3	651	junction_3	29.3468908063529	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464917	107470237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474
ES.36096.11	chr9	+	2462	7	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	-7	-11	intron_retention	FALSE	canonical	3	696	junction_3	24.1913666877715	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGCCCCCTGTGGCCTT	NA	False	NA	10	True	ATTAAA	-22	NA	107464917	107470226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273
ES.36096.12	chr9	+	7006	10	Fusion	ENSMUSG00000010048.11_ENSMUSG00000103164.2	novel	2054	11	NA	NA	-7	41660	intron_retention	FALSE	canonical	0	0	junction_9	220.793406593272	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCGGGAGGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	107464917	107513750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468905_107469273_107469403_107469474_107469571_107469673_107472796_107513579
ES.36096.13	chr9	+	2168	10	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	-7	3	intron_retention	FALSE	canonical	3	631	junction_9	35.0428309358705	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTATCCTGAGTCTTG	NA	False	NA	24	True	ATTAAA	-36	NA	107464917	107470240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.14	chr9	+	4008	10	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-7	1	intron_retention	FALSE	canonical	3	631	junction_9	36.281138180249	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464917	107470238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.15	chr9	+	2153	10	NNC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	-7	0	intron_retention	FALSE	canonical	1	1	junction_6	222.197665309822	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464917	107470237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468380_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.16	chr9	+	7086	8	Fusion	ENSMUSG00000010048.11_ENSMUSG00000103164.2	novel	2054	11	NA	NA	-7	41660	intron_retention	FALSE	canonical	0	0	junction_7	249.848198810757	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCGGGAGGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	107464917	107513750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107467222_107467307_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107472796_107513579
ES.36096.17	chr9	+	2063	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-5	-18	intron_retention	FALSE	canonical	3	631	junction_10	33.5088048130637	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATACTTAGCCCCCTG	NA	False	NA	3	True	ATTAAA	-15	NA	107464919	107470219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.19	chr9	+	2154	10	ISM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	81	-4	-3	4	intron_retention	FALSE	canonical	3	651	junction_3	29.5108266385218	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATCCTGAGTCTTGC	NA	False	NA	25	True	ATTAAA	-37	NA	107464921	107470241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273
ES.36096.2	chr9	+	2055	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	11	-10	11	10	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGAGTCTTGCCTTCCC	NA	False	NA	31	True	ATTAAA	-43	NA	107464851	107470247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.20	chr9	+	2303	10	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	-2	-13	intron_retention	FALSE	canonical	3	631	junction_9	38.8418763453144	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGCCCCCTGTGGCC	NA	False	NA	8	True	ATTAAA	-20	NA	107464922	107470224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.21	chr9	+	1993	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_7	203.43809341232	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464924	107470238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468380_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.22	chr9	+	2364	8	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	631	junction_7	38.5502587407606	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTTTATCCTGAGTCT	NA	False	NA	22	True	ATTAAA	-34	NA	107464924	107470238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.23	chr9	+	2259	9	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	0	-13	intron_retention	FALSE	canonical	3	631	junction_8	41.1868835310466	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGCCCCCTGTGGCC	NA	False	NA	8	True	ATTAAA	-20	NA	107464924	107470224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.24	chr9	+	5365	8	Fusion	ENSMUSG00000010048.11_ENSMUSG00000103164.2	novel	2054	11	NA	NA	0	41660	intron_retention	FALSE	canonical	0	0	junction_7	250.414350504869	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCGGGAGGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	107464924	107513750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107465146_107467101_107467222_107467307_107468310_107468400_107468905_107469273_107469403_107469474_107469571_107469673_107472796_107513579
ES.36096.25	chr9	+	1957	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.931898359772	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGCCCCCTGTGGCCTT	NA	False	NA	10	True	ATTAAA	-22	NA	107464925	107470226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465150_107467108_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.28	chr9	+	2154	11	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	1	-12	intron_retention	FALSE	canonical	1	2	junction_8	213.386128883768	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGCCCCCTGTGGCCT	NA	False	NA	9	True	ATTAAA	-21	NA	107464925	107470225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468630_107468766_107468905_107469273_107469571_107469673
ES.36096.29	chr9	+	2114	10	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	1	-11	intron_retention	FALSE	canonical	3	631	junction_9	38.3434769187957	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGCCCCCTGTGGCCTT	NA	False	NA	10	True	ATTAAA	-22	NA	107464925	107470226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.3	chr9	+	768	1	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-14	-2828	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGAGTGCCTGCCCA	NA	False	NA	NA	False	ATTAAA	-12	NA	107464910	107465678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107464900_107465700
ES.36096.30	chr9	+	2121	10	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	1	-18	intron_retention	FALSE	canonical	3	631	junction_9	31.8468557666565	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATACTTAGCCCCCTG	NA	False	NA	3	True	ATTAAA	-15	NA	107464925	107470219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.31	chr9	+	4062	9	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	2	-18	intron_retention	FALSE	canonical	3	631	junction_8	37.7522764214292	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATACTTAGCCCCCTG	NA	False	NA	3	True	ATTAAA	-15	NA	107464926	107470219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.34	chr9	+	2241	9	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	4	-14	intron_retention	FALSE	canonical	3	631	junction_8	40.6686304170672	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTAGCCCCCTGTGGC	NA	False	NA	7	True	ATTAAA	-19	NA	107464928	107470223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.35	chr9	+	1293	7	NNC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	4	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.755321100371	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATACTTAGCCCCCTG	NA	False	NA	3	True	ATTAAA	-15	NA	107464928	107470219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465148_107468250_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.37	chr9	+	4660	5	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	651	junction_1	26.2392835268039	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464928	107470237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467393_107467496_107468046_107468130_107468310_107468400_107468905_107469273
ES.36096.38	chr9	+	2273	9	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	6	-12	intron_retention	FALSE	canonical	3	631	junction_8	37.1382552094198	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGCCCCCTGTGGCCT	NA	False	NA	9	True	ATTAAA	-21	NA	107464930	107470225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.39	chr9	+	2544	8	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	651	junction_3	34.6162637251006	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464930	107470237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107468046_107468130_107468310_107468400_107468905_107469273_107469403_107469474
ES.36096.40	chr9	+	2047	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	6	-10	intron_retention	FALSE	canonical	3	631	junction_10	36.5507865852433	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCCCCCTGTGGCCTTT	NA	False	NA	11	True	ATTAAA	-23	NA	107464930	107470227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.41	chr9	+	2341	10	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	6	-18	intron_retention	FALSE	canonical	3	631	junction_9	39.3251717835087	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGATACTTAGCCCCCTG	NA	False	NA	3	True	ATTAAA	-15	NA	107464930	107470219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107468046_107468130_107468310_107468400_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.42	chr9	+	4457	7	NIC	ENSMUSG00000010048.11	novel	2054	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	651	junction_2	33.2047520026209	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTATCCTGAGT	NA	False	NA	20	True	ATTAAA	-32	NA	107464930	107470236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468905_107469273_107469403_107469474
ES.36096.43	chr9	+	4605	11	FSM	ENSMUSG00000010048.11_ENSMUSG00000103164.2	ENSMUST00000194932.6	2054	11	6	-2557	6	704	multi-exon	FALSE	canonical	3	631	junction_10	36.8511872264653	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGCATCTCTACCCA	NA	False	NA	NA	False	NA	NA	NA	107464930	107472794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.44	chr9	+	1938	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-12	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	204.942725318946	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTATCCTGAGT	NA	False	NA	20	True	ATTAAA	-32	NA	107464943	107470236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469398_107469483_107469571_107469673
ES.36096.45	chr9	+	3909	12	FSM	ENSMUSG00000010048.11_ENSMUSG00000103164.2	ENSMUST00000010192.11	2056	12	105	-1958	-10	105	multi-exon	FALSE	canonical	3	631	junction_11	35.5716016363504	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTGCTTTTGGACTTG	NA	False	NA	NA	False	CATAAA	-12	NA	107464945	107472195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.46	chr9	+	3975	10	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	14	-12	intron_retention	FALSE	canonical	3	631	junction_9	33.0323447921751	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTAGCCCCCTGTGGCCT	NA	False	NA	9	True	ATTAAA	-21	NA	107464969	107470225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467222_107467307_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.47	chr9	+	2000	11	FSM	ENSMUSG00000010048.11	ENSMUST00000194932.6	2054	11	70	-16	39	16	multi-exon	FALSE	canonical	3	631	junction_10	36.8511872264653	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGCCTTCCCTCCCTC	NA	False	NA	37	True	ATTAAA	-32	NA	107464994	107470253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.5	chr9	+	2185	10	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-8	-13	intron_retention	FALSE	canonical	3	631	junction_9	39.293765408777	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGCCCCCTGTGGCC	NA	False	NA	8	True	ATTAAA	-20	NA	107464916	107470224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.6	chr9	+	3882	10	Fusion	ENSMUSG00000010048.11_ENSMUSG00000103164.2	novel	2056	12	NA	NA	-8	-250	intron_retention	FALSE	canonical	1	2	junction_7	224.835797422184	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCCTGAAAGTTACTGA	NA	False	NA	NA	False	NA	NA	NA	107464916	107471840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107465146_107467101_107467222_107467307_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468630_107468766_107468905_107469273_107469571_107469673
ES.36096.7	chr9	+	3922	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-7	-13	intron_retention	FALSE	canonical	3	631	junction_10	34.8	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTAGCCCCCTGTGGCC	NA	False	NA	8	True	ATTAAA	-20	NA	107464917	107470224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36096.8	chr9	+	2049	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	631	junction_10	36.7456119829293	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTTTATCCTGAG	NA	False	NA	19	True	ATTAAA	-31	NA	107464917	107470235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
ES.36096.9	chr9	+	1999	12	NNC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	-7	8	intron_retention	FALSE	canonical	0	0	junction_2	201.805855479431	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCTGAGTCTTGCCTTC	NA	False	NA	29	True	ATTAAA	-41	NA	107464917	107470245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107465146_107467101_107467222_107467295_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ES.36097.1	chr9	-	3356	7	ISM	ENSMUSG00000057969.16_ENSMUSG00000103409.3	ENSMUST00000102529.10	2875	18	4490	-1962	394	1281	3prime_fragment	TRUE	canonical	3	49	junction_1	3.45205252953466	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTGAGGAGCAGAGGGG	NA	False	NA	NA	False	TATAAA	-13	NA	107478111	107473591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026
ES.36097.10	chr9	-	3196	20	FSM	ENSMUSG00000057969.16	ENSMUST00000102532.10	3191	20	-8	3	-8	-3	multi-exon	FALSE	canonical	2	3	junction_18	17.1961150028469	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTACGCTGGTTCCAGT	4323	False	NA	-5	True	ATTAAA	-12	NA	107486436	107475418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107484232_107484292_107486319
ES.36097.13	chr9	-	2886	17	NNC	ENSMUSG00000057969.16	novel	2875	18	NA	NA	87	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	14.2805319841384	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGGCCCCAGCAGAC	8378	False	NA	-20	True	AATAAA	-18	NA	107482381	107475549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477418_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.15	chr9	-	3565	12	NIC	ENSMUSG00000057969.16	novel	2875	18	NA	NA	119	1	intron_retention	FALSE	canonical	3	41	junction_6	6.43081424866451	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAATGGCCCCAGCAGA	8410	False	NA	-21	True	AATAAA	-17	NA	107482349	107475550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477745_107478026_107478853_107478958_107479071_107479158_107479305_107480072_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.16	chr9	-	3116	15	NIC	ENSMUSG00000057969.16	novel	2875	18	NA	NA	48	1	intron_retention	FALSE	canonical	3	40	junction_10	6.8957247920841	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAATGGCCCCAGCAGA	8339	False	NA	-21	True	AATAAA	-17	NA	107482420	107475550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477571_107477652_107477745_107478026_107478247_107478556_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.18	chr9	-	3282	18	NNC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_17	15.9881011118466	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAATGGCCCCAGCAG	6880	False	NA	-22	True	AATAAA	-16	NA	107483879	107475551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482741_107483748
ES.36097.2	chr9	-	3361	17	ISM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	244	-614	111	-67	3prime_fragment	FALSE	canonical	3	40	junction_12	7.52054477747457	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGCTTCTTCATTTTT	8402	False	NA	NA	False	NA	NA	NA	107482357	107474939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.21	chr9	-	3355	22	NNC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.0724312013036	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	4316	False	NA	-23	True	AATAAA	-15	NA	107486443	107475552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748_107483854_107483952_107484134_107484232_107484292_107486319
ES.36097.22	chr9	-	5137	14	NIC	ENSMUSG00000057969.16	novel	2987	19	NA	NA	-134	0	intron_retention	FALSE	canonical	3	40	junction_9	7.09112287784093	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	6510	False	NA	-23	True	AATAAA	-15	NA	107484249	107475552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.24	chr9	-	3290	21	NNC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.1293042952199	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	4367	False	NA	-24	True	AATAAA	-14	NA	107486392	107475553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476683_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483952_107484134_107484232_107484292_107486319
ES.36097.27	chr9	-	4587	13	NNC	ENSMUSG00000057969.16	novel	2958	19	NA	NA	1	-1	intron_retention	FALSE	canonical	3	5	junction_12	14.5685639496676	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTGGAATGGCCCCAG	6880	False	NA	-25	True	AATAAA	-13	NA	107483879	107475554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477745_107478026_107478247_107478556_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482614
ES.36097.28	chr9	-	5155	14	NIC	ENSMUSG00000057969.16	novel	2987	19	NA	NA	3	-3	intron_retention	FALSE	canonical	3	21	junction_13	10.8141918589477	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACATTGGAATGGCCCC	6882	False	NA	-27	True	AATAAA	-11	NA	107483877	107475556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107481069_107481241_107481400_107482167_107482355_107482645
ES.36097.29	chr9	-	2976	21	NIC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	5	-221	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	19.6748570515773	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGCCTAAGCTCAATTC	4372	False	NA	NA	False	NA	NA	NA	107486387	107475774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483952_107484134_107484232_107484296_107486319
ES.36097.31	chr9	-	4118	16	NNC	ENSMUSG00000057969.16	novel	2958	19	NA	NA	4	-226	intron_retention	FALSE	canonical	2	2	junction_11	14.555029676675	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGTGGCCTAAGCTC	6883	False	NA	NA	False	NA	NA	NA	107483876	107475779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480324_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167
ES.36097.32	chr9	-	2789	20	NNC	ENSMUSG00000057969.16	novel	3191	20	NA	NA	28	-231	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	18.7402421515912	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTCAAAGAGTGGCCTA	4395	False	NA	NA	False	NA	NA	NA	107486364	107475784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482614_107482787_107484232_107484292_107486319
ES.36097.33	chr9	-	3021	22	NNC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	5	-231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	20.0724312013036	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTCAAAGAGTGGCCTA	4372	False	NA	NA	False	NA	NA	NA	107486387	107475784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482741_107483748_107483854_107483952_107484134_107484232_107484292_107486319
ES.36097.34	chr9	-	2307	19	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2519	711	1	-709	3prime_fragment	FALSE	canonical	0	0	junction_18	15.5384826944089	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTGCGTCGCCTGGTG	6880	False	NA	NA	False	NA	NA	NA	107483879	107476262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748
ES.36097.4	chr9	-	3758	18	NIC	ENSMUSG00000057969.16	novel	3191	20	NA	NA	7	93	intron_retention	FALSE	canonical	1	1	junction_17	18.0334176530444	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGGCAAGGATGTATT	4374	False	NA	91	True	AGTAAA	-14	NA	107486385	107475322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482787_107484232_107484296_107486319
ES.36097.5	chr9	-	3484	20	NIC	ENSMUSG00000057969.16	novel	3410	21	NA	NA	7	92	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	18.7823220946905	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGGCAAGGATGTAT	4374	False	NA	90	True	AGTAAA	-13	NA	107486385	107475323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107483748_107484134_107484232_107484292_107486319
ES.36097.6	chr9	-	3491	20	ISM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	2084	-137	70	1	3prime_fragment	FALSE	canonical	0	0	junction_18	17.6025684351025	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGCTGGTTCCAGTGAGC	6445	False	NA	-1	True	ATTAAA	-16	NA	107484314	107475414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748_107484134_107484232
ES.36097.8	chr9	-	2094	11	NNC	ENSMUSG00000057969.16	novel	2875	18	NA	NA	-1250	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	17.3942519241271	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACGCTGGTTCCAGTGA	NA	False	NA	-3	True	ATTAAA	-14	NA	107480615	107475416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478239_107479202_107479305_107480072_107480193_107480320_107480415_107480495
ES.36097.9	chr9	-	3221	20	NNC	ENSMUSG00000057969.16	novel	3191	20	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	18.7402421515912	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACGCTGGTTCCAGTGA	4331	False	NA	-3	True	ATTAAA	-14	NA	107486428	107475416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482614_107482787_107484232_107484292_107486319
ES.36098.1	chr9	-	2877	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-55	-607	-55	607	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAACAAAA	4715	False	NA	NA	False	NA	NA	NA	107512621	107490716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.10	chr9	-	3035	7	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	5	-17	intron_retention	FALSE	canonical	3	1229	junction_6	79.2683557431477	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4775	False	NA	-17	True	AATAAA	-7	NA	107512561	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.11	chr9	-	725	2	NNC	ENSMUSG00000032562.14	novel	197	2	NA	NA	0	-17	intron_retention	FALSE	non_canonical	0	0	junction_1	0	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4803	False	NA	-17	True	AATAAA	-7	NA	107512533	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107491926_107512393
ES.36098.12	chr9	-	2191	3	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	420	-17	intron_retention	FALSE	canonical	3	1277	junction_2	58.5	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	NA	False	NA	-17	True	AATAAA	-7	NA	107494251	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107493025_107493353_107493743_107494133
ES.36098.13	chr9	-	2556	8	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-29	-17	intron_retention	FALSE	canonical	3	1026	junction_1	124.90437158409	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4741	False	NA	-17	True	AATAAA	-7	NA	107512595	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107492298_107492810_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.14	chr9	-	1345	4	NNC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-2	-17	intron_retention	FALSE	non_canonical	0	0	junction_2	537.930809264124	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4792	False	NA	-17	True	AATAAA	-7	NA	107512544	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107492298_107492810_107492924_107497632_107497662_107512298
ES.36098.15	chr9	-	2019	9	NNC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	39	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	437.018806803552	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4864	False	NA	-17	True	AATAAA	-7	NA	107512472	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107496968_107497241_107497388_107497618_107497662_107512298
ES.36098.16	chr9	-	4832	8	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-1	-17	intron_retention	FALSE	canonical	3	1026	junction_1	131.083397662927	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4769	False	NA	-17	True	AATAAA	-7	NA	107512567	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.17	chr9	-	1781	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-16	450	-16	365	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAAAACTGCAAATCTA	4754	False	NA	NA	False	NA	NA	NA	107512582	107491773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.18	chr9	-	1376	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	-71	472	-16	343	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAGGAAA	4754	False	NA	NA	False	NA	NA	NA	107512582	107491795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.2	chr9	-	2744	8	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1229	junction_7	78.4427517755621	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4754	False	NA	0	True	AATAAA	-24	NA	107512582	107491323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.3	chr9	-	2259	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	-44	0	-44	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4726	False	NA	0	True	AATAAA	-24	NA	107512610	107491323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.4	chr9	-	2756	7	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-23	0	intron_retention	FALSE	canonical	3	1026	junction_1	123.831426634042	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4747	False	NA	0	True	AATAAA	-24	NA	107512589	107491323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107492298_107492810_107493508_107493612_107493743_107494133_107494263_107496895_107497388_107497618_107497662_107512298
ES.36098.6	chr9	-	1870	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	-98	5	-43	-5	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCCGTGTTCTTTT	4727	False	NA	-5	True	AATAAA	-19	NA	107512609	107491328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.7	chr9	-	2420	9	NNC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	-1	-9	intron_retention	FALSE	canonical	0	0	junction_1	444.676269183549	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAAAACTTCCGTGTTC	4793	False	NA	-9	True	AATAAA	-15	NA	107512543	107491332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107492535_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ES.36098.8	chr9	-	1400	6	NNC	ENSMUSG00000032562.14	novel	1777	9	NA	NA	-1	-17	intron_retention	FALSE	non_canonical	0	0	junction_5	592.944314417467	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	4793	False	NA	-17	True	AATAAA	-7	NA	107512543	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494244_107512325
ES.36098.9	chr9	-	4467	4	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	1331	-17	intron_retention	FALSE	canonical	3	1026	junction_1	121.249971363112	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACACCAAAAACTT	NA	False	NA	-17	True	AATAAA	-7	NA	107496816	107491340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107492298_107492810_107493508_107493612_107493743_107494133
ES.36099.1	chr9	+	177	1	Intergenic	novelGene_29359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTACATATCA	NA	False	NA	NA	False	NA	NA	NA	107524522	107524699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107524500_107524700
ES.361.1	chr1	-	2706	5	NNC	ENSMUSG00000101634.7	novel	675	4	NA	NA	-37571	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACGACTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	39924065	39878334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_39878765_39879800_39881717_39884387_39884500_39923329_39923430_39923917
ES.3610.1	chr10	-	5860	13	NNC	ENSMUSG00000036099.17	novel	4479	12	NA	NA	-1	1439	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.2594579546662	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGGCTTAAAGTTTAT	3462	False	NA	NA	False	NA	NA	NA	93871612	93802522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93803115_93803174_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.10	chr10	-	4105	1	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	716	-1588	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGATGTGTGCTGGGGTT	NA	False	NA	-2	True	AATAAA	-17	NA	93809654	93805549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93805500_93809700
ES.3610.12	chr10	-	2909	12	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	10	-1589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.6077385483647	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCGATGTGTGCTGGGGT	3445	False	NA	-3	True	AATAAA	-16	NA	93871629	93805550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820344_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.16	chr10	-	2692	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-50	1837	3	1379	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTTGGCAAATCTTTA	3414	False	NA	NA	False	AATAAA	-35	NA	93871660	93805798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.17	chr10	-	2500	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-50	2029	3	1187	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAATGAGTGTGTGT	3414	False	NA	46	True	NA	NA	NA	93871660	93805990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.18	chr10	-	5603	11	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	-6	1140	intron_retention	FALSE	non_canonical	0	0	junction_5	19.1219768852491	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGATTGTTCTTTTT	3405	False	NA	-1	True	AATAAA	-17	NA	93871669	93806037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826146_93829375_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.2	chr10	-	5866	13	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	7	1358	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.4547327076232	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTCTCCCCTTTGTATG	3402	False	NA	NA	False	AAGAAA	-3	NA	93871672	93802603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93804416_93804459_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826146_93829375_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.20	chr10	-	2096	10	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	14	1139	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	17.3717522943938	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTTGATTGTTCTTTT	3484	False	NA	-2	True	AATAAA	-16	NA	93871590	93806038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.21	chr10	-	2454	12	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	11	1138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.2779277990723	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCCTTGATTGTTCTTT	3422	False	NA	-3	True	AATAAA	-15	NA	93871652	93806039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826146_93829375_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.22	chr10	-	2109	10	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	8	1138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	21.520016522092	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCCTTGATTGTTCTTT	3478	False	NA	-3	True	AATAAA	-15	NA	93871596	93806039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93832699_93832976_93836212_93836394_93839854_93839945_93842821_93842957_93871531
ES.3610.23	chr10	-	5313	9	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	0	1137	intron_retention	FALSE	canonical	2	3	junction_4	18.4187404563939	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGCCTTGATTGTTCTT	3395	False	NA	-4	True	AATAAA	-14	NA	93871679	93806040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.24	chr10	-	2469	13	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	1	1136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.4857834134315	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATGGCCTTGATTGTTCT	3436	False	NA	-5	True	AATAAA	-13	NA	93871638	93806041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93821256_93821287_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.25	chr10	-	5526	11	NNC	ENSMUSG00000036099.17	novel	3705	12	NA	NA	0	1134	intron_retention	FALSE	non_canonical	0	0	junction_5	18.4252544080129	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGATGGCCTTGATTGTT	3463	False	NA	-7	True	AATAAA	-11	NA	93871611	93806043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826145_93829375_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.26	chr10	-	3825	9	NIC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	1	6273	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.6516538744198	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACCCACTATTTATACA	3436	False	NA	NA	False	NA	NA	NA	93871638	93813951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_93816370_93820023_93820356_93826001_93826146_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.27	chr10	-	3762	5	ISM	ENSMUSG00000036099.17	ENSMUST00000118205.8	3705	12	-56	22106	3	-362	5prime_fragment	FALSE	canonical	3	46	junction_1	7.3824115301167	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTTGAGATTTTACAT	3414	False	NA	NA	False	AATAAA	-23	NA	93871660	93829740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.28	chr10	-	1801	1	FSM	ENSMUSG00000110869.2	ENSMUST00000214203.2	1790	1	9	-20	9	20	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTGGAAGTTTCAAATG	3420	False	NA	NA	False	GATAAA	-16	NA	93871654	93869853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93869900_93871700
ES.3610.3	chr10	-	5122	13	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	0	617	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.2594579546662	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATAGTGACCGTTCATT	3395	False	NA	NA	False	AATAAA	-16	NA	93871679	93803344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93804426_93804468_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.4	chr10	-	2890	12	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	8	-1586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	18.2779277990723	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3478	False	NA	0	True	AATAAA	-19	NA	93871596	93805547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826146_93829375_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.5	chr10	-	2952	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-59	1586	-6	-1586	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3405	False	NA	0	True	AATAAA	-19	NA	93871669	93805547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.6	chr10	-	4400	12	NNC	ENSMUSG00000036099.17	novel	11138	12	NA	NA	0	-1586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.6414627170564	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3470	False	NA	0	True	AATAAA	-19	NA	93871604	93805547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93834711_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.7	chr10	-	2912	12	NNC	ENSMUSG00000036099.17	novel	4479	12	NA	NA	-2	-1586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.9898961541295	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3433	False	NA	0	True	AATAAA	-19	NA	93871641	93805547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820344_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.3610.8	chr10	-	3948	12	FSM	ENSMUSG00000036099.17	ENSMUST00000118077.8	2223	12	-97	-1628	-1	-1588	multi-exon	FALSE	canonical	0	0	junction_1	17.9669117367279	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGATGTGTGCTGGGGTT	3410	False	NA	-2	True	AATAAA	-17	NA	93871664	93805549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_93807570_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ES.36100.1	chr9	+	180	1	Intergenic	novelGene_29360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTGTGATGACAGT	NA	False	NA	NA	False	NA	NA	NA	107525779	107525959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107525800_107526000
ES.36101.1	chr9	+	2929	1	Intergenic	novelGene_29361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCCCAC	5014	False	NA	NA	False	NA	NA	NA	107539097	107542026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107539100_107542000
ES.36101.2	chr9	+	145	1	Intergenic	novelGene_29362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2067	False	NA	NA	False	NA	NA	NA	107541616	107541761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107541600_107541800
ES.36102.1	chr9	-	1606	7	NNC	ENSMUSG00000010064.16	novel	2463	16	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.06718737290547	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGTGTTCTATATTCTT	9841	False	NA	NA	False	TATAAA	-16	NA	107544563	107528352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107529238_107529327_107529408_107535908_107535952_107536130_107536210_107536293_107536444_107542368_107542677_107544502
ES.36102.2	chr9	-	2388	16	NNC	ENSMUSG00000010064.16	novel	2463	16	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2.09125161884775	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCGATTGTGTTCTATA	9852	False	NA	NA	False	TATAAA	-11	NA	107544552	107528357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107529238_107529327_107529432_107532221_107532367_107532454_107532576_107532783_107532885_107533133_107533214_107533298_107533470_107533654_107533714_107533793_107533877_107534828_107534911_107535008_107535102_107535192_107535267_107535835_107535952_107536130_107536210_107536293_107536444_107544502
ES.36103.1	chr9	+	172	1	Intergenic	novelGene_29363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAAGGGTCCC	1440	False	NA	NA	False	NA	NA	NA	107556264	107556436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107556300_107556400
ES.36104.1	chr9	-	3854	19	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	84	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	4.82438507563655	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTCTCTCCTTGG	9918	False	NA	NA	False	AATAAA	-19	NA	107587134	107558698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.10	chr9	-	3046	18	NIC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	1	3	junction_13	4.80844125122019	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCATTCATTGTTCAG	9828	False	NA	NA	False	ATTAAA	-26	NA	107587224	107560316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.11	chr9	-	2913	17	NIC	ENSMUSG00000034684.13	novel	2972	17	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	3.60338382634989	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTCTCATTCATTGT	9864	False	NA	NA	False	ATTAAA	-22	NA	107587188	107560320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.12	chr9	-	1041	4	NIC	ENSMUSG00000034684.13	novel	1034	10	NA	NA	-962	436	intron_retention	FALSE	canonical	3	14	junction_2	1.88561808316413	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTGTTGTCTGT	1482	False	NA	NA	False	NA	NA	NA	107565478	107564037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107564534_107564688_107565044_107565147_107565288_107565428
ES.36104.13	chr9	-	2124	11	NIC	ENSMUSG00000034684.13	novel	2972	17	NA	NA	16	434	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	3.48711915483254	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTGTTGTCT	9850	False	NA	NA	False	NA	NA	NA	107587202	107564039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.2	chr9	-	6413	15	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	83	0	intron_retention	FALSE	canonical	1	2	junction_5	4.81759106540493	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTCTCTCCTTGG	9917	False	NA	NA	False	AATAAA	-19	NA	107587135	107558698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561579_107561748_107561791_107561886_107561976_107562542_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.3	chr9	-	3632	20	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	-148	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_13	5.71482981184859	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTCTCTCCTTGG	7647	False	NA	NA	False	AATAAA	-19	NA	107586826	107558698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568328_107568415_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.4	chr9	-	5271	18	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	-3	93	intron_retention	FALSE	canonical	2	4	junction_13	4.28564837649106	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGCAAAGACAGTATTT	9831	False	NA	NA	False	NA	NA	NA	107587221	107559523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107568415_107568554_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.5	chr9	-	3156	20	NNC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	14	87	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	5.71482981184859	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTACCCCTGCAAAGACA	9848	False	NA	NA	False	NA	NA	NA	107587204	107559529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568351_107568415_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.6	chr9	-	3111	19	NIC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	-5	86	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	4.82438507563655	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTACCCCTGCAAAGAC	9829	False	NA	NA	False	NA	NA	NA	107587223	107559530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.7	chr9	-	2989	18	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	24	86	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	3.78121380705605	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCTACCCCTGCAAAGAC	9858	False	NA	NA	False	NA	NA	NA	107587194	107559530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36104.9	chr9	-	5234	17	NIC	ENSMUSG00000034684.13	novel	2383	18	NA	NA	-39	4	intron_retention	FALSE	canonical	2	4	junction_12	4.18143217091943	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCATTCATTGTTCAG	9795	False	NA	NA	False	ATTAAA	-26	NA	107587257	107560316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107568415_107568554_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ES.36105.1	chr9	+	172	1	Intergenic	novelGene_29364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGATTTAAAAAA	1672	False	NA	NA	False	NA	NA	NA	107589549	107589721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107589500_107589700
ES.36106.1	chr9	+	3671	7	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCTCCTTCTGAGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	107628778	107634734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107628991_107629074_107629153_107629309_107629398_107630175_107630273_107631219_107631384_107631629_107632398_107632470
ES.36106.10	chr9	+	5423	4	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCTCCTTCTGAGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	107628778	107634734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107630697_107630928_107631382_107631621_107632456_107632516
ES.36106.11	chr9	+	3774	6	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629153_107629309_107629398_107630175_107630273_107631219_107631382_107631621_107632456_107632516
ES.36106.12	chr9	+	2695	8	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107628991_107629074_107629153_107629309_107629398_107630175_107630273_107631219_107631382_107631621_107632456_107632516_107633113_107634107
ES.36106.2	chr9	+	5424	4	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCTCCTTCTGAGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	107628778	107634734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107630697_107630928_107631382_107631621_107632463_107632522
ES.36106.3	chr9	+	3733	6	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCTCCTTCTGAGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	107628778	107634734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629153_107629309_107629398_107630175_107630697_107630928_107632459_107632519_107633113_107634107
ES.36106.4	chr9	+	3690	7	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107628991_107629074_107629153_107629309_107629398_107630175_107630273_107631219_107631382_107631621_107632456_107632516
ES.36106.5	chr9	+	5656	3	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107630697_107630928_107632402_107632470
ES.36106.6	chr9	+	3922	5	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629396_107630174_107630273_107631219_107631382_107631621_107632402_107632470
ES.36106.7	chr9	+	3604	5	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629153_107629309_107629396_107630174_107630273_107631620_107632402_107632470
ES.36106.8	chr9	+	4729	5	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629153_107629309_107629398_107630175_107630697_107630928_107632456_107632516
ES.36106.9	chr9	+	2779	7	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCTCCTTCTGAGTAA	NA	False	NA	NA	False	TTTAAA	-12	NA	107628778	107634735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107629153_107629309_107629398_107630175_107630273_107631219_107631382_107631621_107632456_107632516_107633113_107634107
ES.36107.1	chr9	+	2071	1	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAACAATCTAGCTATGTG	680	False	NA	NA	False	NA	NA	NA	107635814	107637885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107635800_107637900
ES.36108.1	chr9	+	193	1	Intergenic	novelGene_29365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTTAAAAAAAAG	8465	False	NA	NA	False	AATAAA	-6	NA	107643599	107643792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107643600_107643800
ES.36109.1	chr9	-	3921	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	397	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	145.293470976274	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTCCAGAGTGCTTCA	9719	False	NA	NA	False	NA	NA	NA	107648181	107617172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
ES.36109.10	chr9	-	3060	25	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.599240829151	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9702	False	NA	-1	True	AAGAAA	-17	NA	107648198	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623356_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.13	chr9	-	2943	23	NIC	ENSMUSG00000032580.13	novel	2986	24	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_18	175.137331002684	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9708	False	NA	-1	True	AAGAAA	-17	NA	107648192	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.14	chr9	-	4648	17	NNC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	287	0	intron_retention	FALSE	non_canonical	0	0	junction_15	144.737639800433	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	1210	False	NA	-1	True	AAGAAA	-17	NA	107634172	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629398_107630175_107630274_107631220_107631382_107631621_107632398_107632470_107633113_107634107
ES.36109.16	chr9	-	3416	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	145.293470976274	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9702	False	NA	-2	True	AAGAAA	-16	NA	107648198	107617694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
ES.36109.17	chr9	-	3541	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	262	junction_19	107.792438648857	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9716	False	NA	-2	True	AAGAAA	-16	NA	107648184	107617694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.18	chr9	-	8700	21	NNC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	150.612043011175	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9716	False	NA	-3	True	AAGAAA	-15	NA	107648184	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632410_107632470_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.19	chr9	-	6304	19	NIC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	2003	-1	intron_retention	FALSE	canonical	3	356	junction_18	76.1099148324479	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9435	False	NA	-3	True	AAGAAA	-15	NA	107642793	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693
ES.36109.2	chr9	-	3704	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-4	199	combination_of_known_junctions	FALSE	canonical	3	17	junction_24	145.293470976274	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAATTTTAGATCTA	9738	False	NA	NA	False	AATAGA	-31	NA	107648162	107617370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
ES.36109.21	chr9	-	5510	23	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	204.715934007013	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9743	False	NA	-3	True	AAGAAA	-15	NA	107648157	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632410_107632470_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
ES.36109.22	chr9	-	1787	14	NNC	ENSMUSG00000032580.13	novel	2691	20	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.29577061576	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	4131	False	NA	-3	True	AAGAAA	-15	NA	107631251	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618204_107621026_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220
ES.36109.23	chr9	-	4371	25	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	151.284081330089	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9716	False	NA	-3	True	AAGAAA	-15	NA	107648184	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632410_107632470_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.24	chr9	-	5780	23	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	28	junction_9	145.990808326081	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9702	False	NA	-3	True	AAGAAA	-15	NA	107648198	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.25	chr9	-	3004	24	FSM	ENSMUSG00000032580.13	ENSMUST00000182371.8	2986	24	-15	-3	1	-1	multi-exon	FALSE	canonical	3	16	junction_19	139.730783549852	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTGTCTTTATTG	9706	False	NA	-3	True	AAGAAA	-15	NA	107648194	107617695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.26	chr9	-	6275	22	NIC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	17	junction_17	145.590953096622	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTCCTGTGTCTTTATT	9702	False	NA	-4	True	AAGAAA	-14	NA	107648198	107617696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.27	chr9	-	5855	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	316	junction_19	102.750105211542	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTCCTGTGTCTTTATT	9711	False	NA	-4	True	AAGAAA	-14	NA	107648189	107617696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.28	chr9	-	3526	17	NNC	ENSMUSG00000032580.13	novel	2691	20	NA	NA	-1118	1	intron_retention	FALSE	non_canonical	0	0	junction_16	148.102951945598	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTCCTGTGTCTTTAT	2463	False	NA	-5	True	AAGAAA	-13	NA	107632919	107617697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632398_107632470
ES.36109.29	chr9	-	6072	18	NNC	ENSMUSG00000032580.13	novel	2986	24	NA	NA	-1073	1	intron_retention	TRUE	non_canonical	0	0	junction_17	144.335993060406	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTCCTGTGTCTTTAT	NA	False	NA	-5	True	AAGAAA	-13	NA	107635532	107617697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632456_107632516
ES.36109.3	chr9	-	3216	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-8	-3	-8	3	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTATGTAGCCTAGAC	9697	False	NA	NA	False	NA	NA	NA	107648203	107617566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.30	chr9	-	3661	19	NNC	ENSMUSG00000032580.13	novel	3064	25	NA	NA	-1041	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	179.733521884174	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTCCTGTGTCTTTAT	NA	False	NA	-5	True	AAGAAA	-13	NA	107635500	107617697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631304_107631621_107631688_107633051_107633113_107634107
ES.36109.31	chr9	-	6282	22	NNC	ENSMUSG00000032580.13	novel	2986	24	NA	NA	-1	0	intron_retention	FALSE	canonical	3	4	junction_12	138.586449848579	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9719	False	NA	-6	True	AAGAAA	-12	NA	107648181	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107629034_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.33	chr9	-	3279	24	NIC	ENSMUSG00000032580.13	novel	3064	25	NA	NA	-2	0	intron_retention	FALSE	canonical	3	262	junction_18	115.088870074925	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9710	False	NA	-6	True	AAGAAA	-12	NA	107648190	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.34	chr9	-	3495	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_24	147.218227802206	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9722	False	NA	-6	True	AAGAAA	-12	NA	107648178	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647647
ES.36109.35	chr9	-	3428	24	NIC	ENSMUSG00000032580.13	novel	2986	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_23	169.742315543887	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9715	False	NA	-6	True	AAGAAA	-12	NA	107648185	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647647
ES.36109.37	chr9	-	3154	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	1	0	intron_retention	FALSE	canonical	3	262	junction_18	113.530672554099	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9706	False	NA	-6	True	AAGAAA	-12	NA	107648194	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.38	chr9	-	6223	22	NIC	ENSMUSG00000032580.13	novel	2986	24	NA	NA	-1	0	intron_retention	FALSE	canonical	3	28	junction_9	144.099046309794	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9728	False	NA	-6	True	AAGAAA	-12	NA	107648172	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.39	chr9	-	5351	24	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_17	154.535856075069	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9728	False	NA	-6	True	AAGAAA	-12	NA	107648172	107617698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632456_107632516_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.41	chr9	-	3831	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	262	junction_18	115.045499341411	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTTTCCTGTGTC	9728	False	NA	-10	True	AAGAAA	-8	NA	107648172	107617702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.42	chr9	-	2991	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	150.355231542417	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTTTCCTGTGTC	9701	False	NA	-10	True	AAGAAA	-8	NA	107648199	107617702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.43	chr9	-	3357	25	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	173.02997793414	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTTTCCTGTGTC	9735	False	NA	-10	True	AAGAAA	-8	NA	107648165	107617702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626915_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647759
ES.36109.44	chr9	-	6637	23	NIC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	17	junction_22	137.262078154068	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTTTCCTGTGTC	9728	False	NA	-10	True	AAGAAA	-8	NA	107648172	107617702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647750
ES.36109.45	chr9	-	5267	23	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_16	183.779607723153	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGGTTTCCTGTGTC	9707	False	NA	-10	True	AAGAAA	-8	NA	107648193	107617702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632394_107632470_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.46	chr9	-	3055	25	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.686704068865	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAACTGGGTTTCCTGTG	9707	False	NA	-12	True	AAGAAA	-6	NA	107648193	107617704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619708_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.49	chr9	-	5320	24	NNC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-1	-48	intron_retention	FALSE	non_canonical	0	0	junction_17	154.535856075069	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAGCTGCCACGTCTGG	9711	False	NA	-54	True	NA	NA	NA	107648189	107617746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632410_107632470_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.5	chr9	-	3458	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	-3	50	combination_of_known_junctions	FALSE	canonical	3	14	junction_24	145.703537477075	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATCTGTGGTTTTTCTTT	9702	False	NA	49	True	NA	NA	NA	107648198	107617643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647759
ES.36109.50	chr9	-	3337	25	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	0	-63	combination_of_known_junctions	FALSE	canonical	3	14	junction_24	145.703537477075	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAAGATTTTCAGTCT	9705	False	NA	-69	True	NA	NA	NA	107648195	107617761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107647759
ES.36109.51	chr9	-	2864	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	4	337	-3	-208	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTGTTGTGTCCCTAC	9709	False	NA	NA	False	NA	NA	NA	107648191	107617906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.52	chr9	-	4253	7	NNC	ENSMUSG00000032580.13	novel	1704	18	NA	NA	-878	-1878	intron_retention	FALSE	non_canonical	0	0	junction_6	229.803357967923	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATTGAAAAGCCTAGCT	2703	False	NA	NA	False	NA	NA	NA	107632679	107625221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107632402_107632470
ES.36109.53	chr9	-	4449	1	FSM	ENSMUSG00000032580.13	ENSMUST00000182792.2	4718	1	-2565	2834	-514	-1883	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAGAATTGAAAAGCC	5707	False	NA	NA	False	NA	NA	NA	107629675	107625226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107625200_107629700
ES.36109.54	chr9	-	3287	17	ISM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	-4	7529	-2	-1884	5prime_fragment	FALSE	canonical	3	44	junction_1	157.694213095313	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAGAATTGAAAAGC	9710	False	NA	NA	False	NA	NA	NA	107648190	107625227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.55	chr9	-	5909	8	NNC	ENSMUSG00000032580.13	novel	1704	18	NA	NA	-154	-1924	intron_retention	FALSE	non_canonical	0	0	junction_7	214.025365652899	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCTGTCTCAAAAAAAAAA	769	False	NA	NA	False	ATTAAA	-34	NA	107634613	107625267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107632456_107632516
ES.36109.56	chr9	-	2759	1	FSM	ENSMUSG00000032580.13	ENSMUST00000181993.2	1775	1	-14	-970	-1	970	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTACTCTGAAATTGGAT	9728	False	NA	NA	False	NA	NA	NA	107648172	107645413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107645400_107648200
ES.36109.7	chr9	-	3127	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	-46	124	-46	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9659	False	NA	-1	True	AAGAAA	-17	NA	107648241	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.8	chr9	-	6339	23	FSM	ENSMUSG00000032580.13	ENSMUST00000183307.8	6321	23	-18	0	-3	0	multi-exon	FALSE	canonical	3	324	junction_22	95.559855328549	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9702	False	NA	-1	True	AAGAAA	-17	NA	107648198	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ES.36109.9	chr9	-	6370	22	NNC	ENSMUSG00000032580.13	novel	6321	23	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_20	144.052113271095	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9748	False	NA	-1	True	AAGAAA	-17	NA	107648152	107617693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107618292_107619590_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644906_107646759_107646826_107648083
ES.3611.1	chr10	+	4715	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	-5	3334	-5	2134	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTTTCTGAGACTCAC	NA	False	NA	13	True	ATTAAA	-25	NA	93871857	93977867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ES.3611.2	chr10	+	4935	22	NNC	ENSMUSG00000020021.5	novel	8044	21	NA	NA	66	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	5.53201361198385	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGGTGTGAAGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	93871928	93981199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614_93977795_93980835
ES.3611.3	chr10	+	7951	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	94	-1	94	1	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGTGTGAAGTCCTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	93871956	93981202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ES.3611.4	chr10	+	4066	8	NIC	ENSMUSG00000020021.5	novel	8044	21	NA	NA	-9620	2121	intron_retention	FALSE	canonical	3	17	junction_2	3.41066753894666	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTGGTCATAACTGT	NA	False	NA	0	True	ATTAAA	-12	NA	93959404	93977854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93960821_93961410_93961495_93963230_93963311_93969141_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ES.3611.5	chr10	+	1683	7	ISM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	96593	3346	-569	2122	3prime_fragment	FALSE	canonical	3	17	junction_1	3.74165738677394	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTGGTCATAACTGTT	NA	False	NA	1	True	ATTAAA	-13	NA	93968455	93977855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ES.3611.6	chr10	+	4409	4	ISM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	101017	2	3855	-2	3prime_fragment	FALSE	canonical	3	18	junction_3	3.68178700572909	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGGTGTGAAGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	93972879	93981199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_93973426_93974145_93974275_93975600_93975750_93977614
ES.36110.1	chr9	+	162	1	Intergenic	novelGene_29366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAACAAC	4546	False	NA	NA	False	NA	NA	NA	107660485	107660647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107660500_107660600
ES.36111.1	chr9	+	175	1	Intergenic	novelGene_29367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGTTTTCAAAACA	NA	False	NA	NA	False	NA	NA	NA	107672497	107672672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107672500_107672700
ES.36111.2	chr9	+	173	2	Antisense	novelGene_ENSMUSG00000102670.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCCATTCTAT	NA	False	NA	NA	False	NA	NA	NA	107672497	107723049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107672654_107723032
ES.36111.3	chr9	+	173	1	Intergenic	novelGene_29368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCAAACAAT	NA	False	NA	NA	False	NA	NA	NA	107701380	107701553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107701400_107701600
ES.36111.4	chr9	+	2153	1	Intergenic	novelGene_29369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAACCAAAAGCTTCTAA	NA	False	NA	NA	False	NA	NA	NA	107710736	107712889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107710700_107712900
ES.36112.1	chr9	-	4029	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	-30	0	-30	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7475	False	NA	NA	False	AATAAA	-22	NA	107750058	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.10	chr9	-	2923	16	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	10	0	intron_retention	FALSE	canonical	3	80	junction_14	80.163998569599	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7622	False	NA	NA	False	AATAAA	-22	NA	107749911	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
ES.36112.11	chr9	-	4209	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	122.285899718002	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7475	False	NA	NA	False	AATAAA	-22	NA	107750058	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107678912_107679093_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.12	chr9	-	3977	21	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	103.636130282831	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7561	False	NA	NA	False	AATAAA	-22	NA	107749972	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665098_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.13	chr9	-	3855	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	120.213491117728	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7545	False	NA	NA	False	AATAAA	-22	NA	107749988	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107678912_107679080_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.14	chr9	-	3804	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	102.328757459351	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7594	False	NA	NA	False	AATAAA	-22	NA	107749939	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730000_107730105_107730874_107737547_107737659_107749847
ES.36112.15	chr9	-	3875	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_19	89.637310869972	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7495	False	NA	NA	False	AATAAA	-22	NA	107750038	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730740_107737547_107737659_107749847
ES.36112.16	chr9	-	4132	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	149.091047986018	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7574	False	NA	NA	False	AATAAA	-22	NA	107749959	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665098_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107678912_107679083_107710632_107710707_107724466_107724537_107728113_107728202_107729323_107730874_107737547_107737659_107749847
ES.36112.17	chr9	-	4054	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	122.285899718002	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7620	False	NA	NA	False	AATAAA	-22	NA	107749913	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107678912_107679083_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.2	chr9	-	3738	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	-18	-4	-10	0	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7495	False	NA	NA	False	AATAAA	-22	NA	107750038	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.20	chr9	-	4430	21	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	32	junction_20	114.706091817305	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7561	False	NA	NA	False	AATAAA	-22	NA	107749972	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
ES.36112.21	chr9	-	4909	13	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-5341	0	intron_retention	TRUE	non_canonical	0	0	junction_10	110.580632973812	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	5164	False	NA	NA	False	AATAAA	-22	NA	107674468	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665849_107666053_107668365_107668950_107669218_107673675
ES.36112.22	chr9	-	2432	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	92.2765408974567	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7610	False	NA	NA	False	AATAAA	-22	NA	107749923	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107729412_107737547_107737659_107749847
ES.36112.23	chr9	-	3892	22	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_19	121.901450847891	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7581	False	NA	NA	False	AATAAA	-18	NA	107749952	107650761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730740_107737547_107737659_107738821_107738929_107749847
ES.36112.24	chr9	-	3973	20	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	125.503308053652	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7628	False	NA	NA	False	AATAAA	-18	NA	107749905	107650761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749401
ES.36112.25	chr9	-	2188	18	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	32	junction_17	125.657082658103	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7633	False	NA	NA	False	AATAAA	-16	NA	107749900	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107738821_107738929_107749847
ES.36112.26	chr9	-	3910	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	104.076834598291	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7546	False	NA	NA	False	AATAAA	-16	NA	107749987	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668323_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.27	chr9	-	2189	17	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7525	False	NA	NA	False	AATAAA	-16	NA	107750008	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
ES.36112.28	chr9	-	4445	20	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_12	102.222341991446	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7604	False	NA	NA	False	AATAAA	-16	NA	107749929	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669215_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.3	chr9	-	2634	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_19	91.3922726492782	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7564	False	NA	NA	False	AATAAA	-22	NA	107749969	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107729568_107737547_107737659_107749847
ES.36112.30	chr9	-	3984	21	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_15	132.974847245635	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7547	False	NA	NA	False	AATAAA	-16	NA	107749986	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
ES.36112.31	chr9	-	2495	16	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	0	-2	intron_retention	FALSE	canonical	3	80	junction_14	81.4751223107738	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7599	False	NA	NA	False	AATAAA	-16	NA	107749934	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
ES.36112.32	chr9	-	6320	19	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	16528	2	-4860	-2	3prime_fragment	FALSE	canonical	3	211	junction_18	55.8402980730663	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	107733492	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323
ES.36112.33	chr9	-	3594	21	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	102.268506882618	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7621	False	NA	NA	False	AATAAA	-16	NA	107749912	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710695_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.34	chr9	-	3512	16	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	118.146161831672	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7612	False	NA	NA	False	AATAAA	-16	NA	107749921	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107665064_107665306_107665389_107665528_107665849_107666053_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
ES.36112.35	chr9	-	2462	8	NIC	ENSMUSG00000032582.15	novel	2066	16	NA	NA	2787	-2	intron_retention	FALSE	canonical	3	310	junction_5	45.6593419817246	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	9991	False	NA	NA	False	AATAAA	-16	NA	107665573	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660985_107664450_107665064_107665306_107665389_107665528
ES.36112.37	chr9	-	2297	19	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	91.9157558465332	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7561	False	NA	NA	False	AATAAA	-16	NA	107749972	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107737547_107737659_107749847
ES.36112.38	chr9	-	3560	21	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	101.510824545957	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7625	False	NA	NA	False	AATAAA	-16	NA	107749908	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668323_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.39	chr9	-	4341	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	98	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	116.601847882893	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7710	False	NA	NA	False	AATAAA	-16	NA	107749823	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749401
ES.36112.4	chr9	-	3845	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	111.389126107381	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7495	False	NA	NA	False	AATAAA	-22	NA	107750038	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107738821_107738929_107749847
ES.36112.40	chr9	-	4723	20	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	99	junction_18	75.1922743128806	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7600	False	NA	NA	False	AATAAA	-16	NA	107749933	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.41	chr9	-	4048	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	122.541565903777	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7546	False	NA	NA	False	AATAAA	-16	NA	107749987	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107716033_107716130_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.42	chr9	-	2732	5	NNC	ENSMUSG00000032582.15	novel	2066	16	NA	NA	-1871	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	175.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	9638	False	NA	NA	False	AATAAA	-16	NA	107659371	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107657578_107657915
ES.36112.45	chr9	-	4231	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	122.541565903777	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7608	False	NA	NA	False	AATAAA	-16	NA	107749925	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107716033_107716130_107724221_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.46	chr9	-	3843	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	92.2765408974567	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTTTGTTAAAGTTT	7630	False	NA	NA	False	AATAAA	-16	NA	107749903	107650763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730849_107737547_107737659_107749847
ES.36112.47	chr9	-	4051	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	135.924548898267	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATTTTGTTAAAGTT	7608	False	NA	NA	False	AATAAA	-15	NA	107749925	107650764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656244_107656403_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664973_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.48	chr9	-	2217	18	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	2	28	junction_16	88.9552198685862	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATTTTGTTAAAGTT	7570	False	NA	NA	False	AATAAA	-15	NA	107749963	107650764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107737547_107737659_107749847
ES.36112.49	chr9	-	2375	20	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	90.056922596096	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATTTTGTTAAAGTT	7572	False	NA	NA	False	AATAAA	-15	NA	107749961	107650764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107737547_107737659_107749847
ES.36112.5	chr9	-	4098	21	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	102.254535351739	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7581	False	NA	NA	False	AATAAA	-22	NA	107749952	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749401
ES.36112.50	chr9	-	2077	16	FSM	ENSMUSG00000032582.15	ENSMUST00000181986.8	2066	16	-11	0	1	0	multi-exon	FALSE	canonical	0	0	junction_14	99.8488635666704	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7560	False	NA	NA	False	AATAAA	-14	NA	107749973	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107737547_107737659_107749847
ES.36112.51	chr9	-	2842	15	NIC	ENSMUSG00000032582.15	novel	2066	16	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_13	101.138317089387	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7620	False	NA	NA	False	AATAAA	-14	NA	107749913	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107737547_107737659_107749847
ES.36112.52	chr9	-	4719	18	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-3301	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	123.7052809697	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	107731933	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665098_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107724466_107724537_107728113_107728204_107729323
ES.36112.53	chr9	-	2057	17	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	114.48183193743	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7634	False	NA	NA	False	AATAAA	-14	NA	107749899	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664577_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
ES.36112.54	chr9	-	6037	13	NIC	ENSMUSG00000032582.15	novel	2066	16	NA	NA	-9121	0	intron_retention	FALSE	canonical	3	304	junction_8	39.8483235392518	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	1384	False	NA	NA	False	AATAAA	-14	NA	107678248	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897
ES.36112.55	chr9	-	2640	22	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	129.637065330418	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7627	False	NA	NA	False	AATAAA	-14	NA	107749906	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107730659_107730874_107737547_107737659_107738821_107738929_107749847
ES.36112.56	chr9	-	3494	21	NNC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	92.2765408974567	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7601	False	NA	NA	False	AATAAA	-14	NA	107749932	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730473_107737547_107737659_107749847
ES.36112.58	chr9	-	3808	20	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_15	105.825183813145	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAATTTTGTTAAAGT	7614	False	NA	NA	False	AATAAA	-14	NA	107749919	107650765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.6	chr9	-	6575	19	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-14	0	intron_retention	FALSE	canonical	2	10	junction_14	103.242552716203	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7545	False	NA	NA	False	AATAAA	-22	NA	107749988	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.60	chr9	-	6973	1	Genic_Genomic	ENSMUSG00000032582.15	novel	NA	NA	NA	NA	-21000	-5223	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107690127	107683154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_107683200_107690100
ES.36112.61	chr9	-	3643	6	ISM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	53	58255	-1	-187	5prime_fragment	FALSE	canonical	3	99	junction_4	79.9249648107523	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTAATGTCTTATTTT	7558	False	NA	NA	False	AATAAA	-28	NA	107749975	107709012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ES.36112.62	chr9	-	2065	6	FSM	ENSMUSG00000032582.15	ENSMUST00000182301.7	3527	6	32	1430	10	-1430	multi-exon	FALSE	canonical	3	125	junction_4	70.7740065278206	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAACTAATGATGATTT	7622	False	NA	NA	False	AATACA	-17	NA	107749911	107710255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ES.36112.8	chr9	-	4063	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	113.526006690147	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7548	False	NA	NA	False	AATAAA	-22	NA	107749985	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
ES.36112.9	chr9	-	2274	19	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	28	junction_16	128.119976565178	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7627	False	NA	NA	False	AATAAA	-22	NA	107749906	107650757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107737547_107737659_107738821_107738929_107749847
ES.36113.1	chr9	-	198	1	Intergenic	novelGene_29370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	107758294	107758096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_107758100_107758300
ES.36114.1	chr9	+	3522	3	ISM	ENSMUSG00000032583.8	ENSMUST00000191906.6	2821	4	-23	1	-23	-1	intron_retention	FALSE	canonical	3	19	junction_2	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGCCCTTTGTCATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	107765326	107780332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107765602_107775870_107776011_107777225
ES.36114.2	chr9	+	2763	5	NIC	ENSMUSG00000032583.8	novel	2042	6	NA	NA	-22	-6	intron_retention	FALSE	canonical	3	19	junction_2	6.41774882649672	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGTTGCCCTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	107765327	107780327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107765602_107775870_107776011_107777225_107779160_107779814_107779963_107780060
ES.36114.3	chr9	+	3422	4	NIC	ENSMUSG00000032583.8	novel	2042	6	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	19	junction_2	6.84754619472471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCCTTTGTCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	107765327	107780331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107765602_107775870_107776011_107777225_107779963_107780060
ES.36114.4	chr9	+	2043	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	-13	12	-13	-7	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTTGCCCTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	107765367	107780326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
ES.36114.5	chr9	+	2243	9	NNC	ENSMUSG00000032583.8	novel	2042	6	NA	NA	0	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	12.4272885216366	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACACTGTTGCCCTTTG	NA	False	NA	NA	False	ATTAAA	-10	NA	107765380	107780326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107765602_107774663_107774744_107775438_107775517_107775719_107775775_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
ES.36115.1	chr9	+	4715	19	FSM	ENSMUSG00000032584.13	ENSMUST00000035203.9	4722	19	7	0	7	0	multi-exon	TRUE	canonical	0	0	junction_3	1.21207912384841	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGTGTATGCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	107784078	107797582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107785580_107788718_107788908_107788992_107789122_107789276_107789448_107789770_107789932_107790274_107790441_107790547_107790685_107791418_107791581_107791674_107791769_107791910_107792127_107792208_107792356_107792435_107792602_107792902_107793131_107793485_107793567_107793750_107793933_107794013_107794124_107794397_107794564_107794962_107795100_107797010
ES.36115.2	chr9	+	4386	17	NIC	ENSMUSG00000032584.13	novel	4717	19	NA	NA	-2	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.2608900626145	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATTCGAGCACAAGTA	NA	False	NA	NA	False	NA	NA	NA	107784103	107797565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107785608_107789276_107789448_107789770_107789932_107790274_107790441_107790547_107790685_107791418_107791581_107791674_107791769_107791907_107792127_107792208_107792356_107792435_107792602_107792902_107793131_107793485_107793567_107793750_107793933_107794013_107794124_107794397_107794564_107794962_107795100_107797010
ES.36116.1	chr9	+	3076	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	200	1	-24	-1	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTTGCCTTTGCTTCC	NA	False	NA	17	True	AATAAA	-25	NA	107813072	107826889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.10	chr9	+	3678	11	FSM	ENSMUSG00000032936.14_ENSMUSG00000032586.10	ENSMUST00000035700.14	3277	11	236	-637	2	637	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCTTTGAAGCATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	107813108	107827527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.11	chr9	+	4042	9	Fusion	ENSMUSG00000032936.14_ENSMUSG00000032586.10	novel	3253	10	NA	NA	4	632	intron_retention	FALSE	canonical	3	40	junction_4	5.62222153601225	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTGGTCTTTGAAGC	NA	False	NA	NA	False	AATAAA	-11	NA	107813110	107827522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.12	chr9	+	3342	12	NNC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.8412243640691	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813111	107826882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107814438_107814751_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.13	chr9	+	2869	12	NNC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	18.5396604139467	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813111	107826882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824212_107824360_107824578_107824667_107824942_107825999_107826227
ES.36116.14	chr9	+	3563	8	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	40	junction_4	6	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813111	107826882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824360_107824578_107824667_107824942
ES.36116.15	chr9	+	3154	10	NNC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	5	-1	intron_retention	FALSE	canonical	1	1	junction_7	19.0852538254079	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTTGCCTTTGCTTCC	NA	False	NA	17	True	AATAAA	-25	NA	107813111	107826889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823317_107823417_107823538_107823660_107823816_107824119_107824212_107824360_107824578_107824667_107824942
ES.36116.16	chr9	+	2929	12	NNC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	14.773776186538	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTTGCCTT	NA	False	NA	10	True	AATAAA	-18	NA	107813113	107826882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942_107825082_107825180
ES.36116.17	chr9	+	3647	7	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	8	-2	intron_retention	FALSE	canonical	3	40	junction_4	5.69844033242625	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCCACCCTCTTGCC	NA	False	NA	8	True	AATAAA	-16	NA	107813114	107826880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107824360_107824578_107824667_107824942
ES.36116.18	chr9	+	3189	10	NIC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	10	-1	intron_retention	FALSE	canonical	3	33	junction_4	7.06757506390633	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTTGCCTTTGCTTCC	NA	False	NA	17	True	AATAAA	-25	NA	107813116	107826889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.19	chr9	+	3812	10	Fusion	ENSMUSG00000032936.14_ENSMUSG00000032586.10	novel	3277	11	NA	NA	21	633	intron_retention	FALSE	canonical	3	33	junction_4	7.06757506390633	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGGTCTTTGAAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	107813127	107827523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.2	chr9	+	3927	10	FSM	ENSMUSG00000032936.14_ENSMUSG00000032586.10	ENSMUST00000192318.2	3253	10	-23	-651	-23	637	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCTTTGAAGCATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	107813073	107827527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.3	chr9	+	3343	10	NNC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	1	junction_7	15.6993355210489	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCACCCTCTTGCCT	NA	False	NA	9	True	AATAAA	-17	NA	107813079	107826881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824212_107824360_107824578_107824667_107824942
ES.36116.4	chr9	+	3223	10	NNC	ENSMUSG00000032936.14	novel	3277	11	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	1	junction_7	15.0996688705415	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTCTTGCCTTTGCTTC	NA	False	NA	16	True	AATAAA	-24	NA	107813081	107826888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107824119_107824212_107824360_107824578_107824667_107824942
ES.36116.5	chr9	+	3519	8	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	40	junction_4	5.27605294646268	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCACCCTCTTGCCT	NA	False	NA	9	True	AATAAA	-17	NA	107813081	107826881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.6	chr9	+	3436	9	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	40	junction_4	5.62222153601225	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTCTTGCCTTTGCTT	NA	False	NA	15	True	AATAAA	-23	NA	107813081	107826887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.7	chr9	+	3967	10	Fusion	ENSMUSG00000032936.14_ENSMUSG00000032586.10	novel	3253	10	NA	NA	2	634	intron_retention	FALSE	canonical	1	1	junction_7	15.6993355210489	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGGTCTTTGAAGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	107813098	107827524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824212_107824360_107824578_107824667_107824942
ES.36116.8	chr9	+	3256	10	FSM	ENSMUSG00000032936.14	ENSMUST00000192318.2	3253	10	2	-5	2	-1	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCACCCTCTTGCCT	NA	False	NA	9	True	AATAAA	-17	NA	107813098	107826881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ES.36116.9	chr9	+	3628	8	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	36	junction_5	6.26620348556037	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTCTTGCCTTTGCTTC	NA	False	NA	16	True	AATAAA	-24	NA	107813098	107826888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107824119_107824280_107824360_107824578
ES.36117.1	chr9	+	1926	15	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	88.7409667722494	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGCTGTATAAATTTG	NA	False	NA	19	True	AATAAA	-20	NA	107828147	107848730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833592_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.10	chr9	+	5426	11	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	-6	intron_retention	FALSE	canonical	3	271	junction_2	36.9816170549639	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAAGTTGGTTTGGCAGA	NA	False	NA	-2	True	NA	NA	NA	107828157	107849463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.11	chr9	+	2187	14	ISM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	6	728	-5	17	intron_retention	FALSE	canonical	3	256	junction_7	34.4793909802198	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTGTACCAAAACCT	NA	False	NA	30	True	AATAAA	-31	NA	107828160	107848741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906
ES.36117.12	chr9	+	3681	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-4	4	intron_retention	FALSE	canonical	3	256	junction_6	39.5181920132994	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828161	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.13	chr9	+	3345	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-4	-461	intron_retention	FALSE	canonical	3	271	junction_2	36.9198644213232	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAAGCTGGATACCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	107828161	107848263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.14	chr9	+	2589	14	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-3	4	intron_retention	FALSE	canonical	0	0	junction_6	92.8183949326308	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828162	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838706_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.15	chr9	+	4405	11	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	271	junction_2	33.808430901182	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGGTTTGGCAGAGTA	NA	False	NA	1	True	NA	NA	NA	107828162	107849466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906
ES.36117.16	chr9	+	4275	12	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	intron_retention	FALSE	canonical	3	271	junction_2	37.052787896582	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828165	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.17	chr9	+	4968	12	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	272	junction_2	35.8735151735802	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107828165	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.19	chr9	+	2619	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	4	intron_retention	FALSE	canonical	2	5	junction_2	115.048725258794	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828168	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833386_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.2	chr9	+	2989	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-3	4	intron_retention	FALSE	canonical	3	272	junction_2	35.6825315183152	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828151	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.20	chr9	+	2018	16	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	109.92348854241	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828168	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107846906_107846974_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.21	chr9	+	3446	12	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	3	4	intron_retention	FALSE	canonical	3	271	junction_2	38.5746030439718	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828168	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.22	chr9	+	3206	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	5	intron_retention	FALSE	canonical	3	256	junction_7	38.8990500484852	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828168	107848729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.23	chr9	+	2503	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	6	intron_retention	FALSE	canonical	1	5	junction_2	91.3889535359847	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGCTGTATAAATTTG	NA	False	NA	19	True	AATAAA	-20	NA	107828168	107848730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833592_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.24	chr9	+	1692	17	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	109.308622715685	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107828168	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172_107848248_107848824_107848882_107849302
ES.36117.25	chr9	+	2842	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	3	intron_retention	FALSE	canonical	3	256	junction_5	38.758063677124	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828168	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.26	chr9	+	2616	15	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	4	intron_retention	FALSE	canonical	1	4	junction_10	113.709911078811	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828168	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107846906_107846974_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.27	chr9	+	2445	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	4	intron_retention	FALSE	canonical	1	1	junction_6	133.378948404728	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828168	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838859_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107846906_107846974_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.28	chr9	+	5170	10	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	3	5	intron_retention	FALSE	canonical	3	271	junction_2	38.9779931578998	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828168	107848729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.29	chr9	+	4466	12	ISM	ENSMUSG00000032586.10	ENSMUST00000194538.6	3680	14	835	-743	4	-2	intron_retention	FALSE	canonical	1	4	junction_8	121.280564010115	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107828169	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107840617_107845792_107845949_107846906_107846974_107847202_107847252_107847667_107847818_107847906
ES.36117.3	chr9	+	2562	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	3	intron_retention	TRUE	canonical	3	271	junction_2	36.9687217865663	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828154	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.31	chr9	+	3612	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	4	4	intron_retention	FALSE	canonical	3	256	junction_7	39.5839473636585	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828169	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.32	chr9	+	3826	12	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	4	intron_retention	FALSE	canonical	3	256	junction_7	33.8601889642426	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828170	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840617_107845792_107847252_107847667_107847818_107847906
ES.36117.33	chr9	+	5443	13	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	4	intron_retention	TRUE	canonical	1	1	junction_7	124.115621498666	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828170	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107844285_107844373_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.34	chr9	+	3438	12	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	3	intron_retention	FALSE	canonical	3	272	junction_2	34.970826093845	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828170	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.35	chr9	+	1484	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	16	1206	5	-461	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAAGCTGGATACCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	107828170	107848263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.36	chr9	+	1971	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	88.9146575460459	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828170	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840505_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.37	chr9	+	1379	13	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	87.9979482084036	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828170	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847240_107848529
ES.36117.38	chr9	+	3036	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	5	4	intron_retention	FALSE	canonical	3	271	junction_2	38.4732049613754	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828170	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.39	chr9	+	3014	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	7	4	intron_retention	FALSE	canonical	3	271	junction_2	36.8442668538811	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828172	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.4	chr9	+	4356	13	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	intron_retention	FALSE	canonical	2	5	junction_2	122.066125067067	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828154	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833386_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.40	chr9	+	8393	13	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	8	-1	intron_retention	FALSE	canonical	3	5	junction_9	94.1429173591348	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGGCTCTGGCTGTAT	NA	False	NA	12	True	AATAAA	-13	NA	107828173	107848723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840505_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.41	chr9	+	2607	3	ISM	ENSMUSG00000032586.10	ENSMUST00000192567.2	1949	4	9	-210	9	210	intron_retention	FALSE	canonical	3	271	junction_2	36	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTATTGGGTCCATTC	NA	False	NA	NA	False	NA	NA	NA	107828174	107835896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107828372_107833063_107833122_107833544
ES.36117.42	chr9	+	2582	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	9	3	intron_retention	FALSE	canonical	3	256	junction_6	34.0534710255634	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828174	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906
ES.36117.43	chr9	+	1887	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	9	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	92.2801240884252	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828174	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.44	chr9	+	2724	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	9	6	intron_retention	FALSE	canonical	0	0	junction_4	117.562857698357	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGCTGTATAAATTTG	NA	False	NA	19	True	AATAAA	-20	NA	107828174	107848730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107834085_107834265_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.46	chr9	+	2405	14	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	3	intron_retention	FALSE	canonical	1	1	junction_6	92.572121252222	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828186	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838859_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.47	chr9	+	3851	11	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	0	4	intron_retention	FALSE	canonical	3	272	junction_2	36.7517346529385	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828186	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.48	chr9	+	4677	11	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	intron_retention	FALSE	canonical	3	272	junction_2	35.4508109921339	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828186	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.49	chr9	+	3522	14	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	intron_retention	FALSE	canonical	2	11	junction_2	89.0249615949496	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828186	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.5	chr9	+	2201	16	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	111.28833421942	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828154	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107844136_107844373_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.50	chr9	+	3269	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	271	junction_2	36.9687217865663	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107828187	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.51	chr9	+	4320	10	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	1	5	intron_retention	FALSE	canonical	3	272	junction_2	35.3504500818257	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGCTGTATAAATTT	NA	False	NA	18	True	AATAAA	-19	NA	107828187	107848729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.52	chr9	+	2738	16	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	111.282143920557	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGGTTTGGCAGAGTA	NA	False	NA	1	True	NA	NA	NA	107828189	107849466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833386_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.53	chr9	+	2481	15	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	3	intron_retention	FALSE	canonical	0	0	junction_3	117.678999565664	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107828189	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833629_107834085_107834215_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.54	chr9	+	1595	16	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	87.0699846228436	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107828208	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172_107848248_107849302
ES.36117.55	chr9	+	1478	17	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	147	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	127.451400051157	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGGTTTGGCAGAGTA	NA	False	NA	1	True	NA	NA	NA	107828333	107849466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107828372_107833063_107833122_107833592_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172_107848248_107848824_107848882_107849302
ES.36117.56	chr9	+	4585	12	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3082	3	intron_retention	FALSE	canonical	3	5	junction_6	98.292530171948	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCTGGCTGTATAAAT	NA	False	NA	16	True	AATAAA	-17	NA	107831268	107848727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840505_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.57	chr9	+	124	1	Intergenic	novelGene_29371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	107831746	107831870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107831700_107831900
ES.36117.58	chr9	+	4341	11	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	-3712	4	intron_retention	FALSE	canonical	3	282	junction_3	34.9113162169518	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107833877	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.59	chr9	+	2347	4	NIC	ENSMUSG00000032586.10	novel	3680	14	NA	NA	5765	-461	intron_retention	FALSE	canonical	3	327	junction_1	26.6958174002346	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAAGCTGGATACCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	107845196	107848263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.6	chr9	+	2454	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	intron_retention	FALSE	canonical	3	256	junction_7	40.5699046062881	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828154	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.60	chr9	+	1743	1	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	8293	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	False	NA	2	True	NA	NA	NA	107847724	107849467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107847700_107849500
ES.36117.7	chr9	+	1823	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	94.5995580797759	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828154	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.8	chr9	+	2385	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	3	4	intron_retention	FALSE	canonical	3	256	junction_6	38.6426505026483	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828157	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36117.9	chr9	+	1962	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	3	741	3	4	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCTGGCTGTATAAATT	NA	False	NA	17	True	AATAAA	-18	NA	107828157	107848728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ES.36118.1	chr9	-	1050	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	-28	3	-28	-3	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTGGTCCCATACTC	9728	False	NA	NA	False	AATAAA	-14	NA	107863106	107861424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107862264_107862895
ES.36119.1	chr9	-	180	1	Intergenic	novelGene_29372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCACATGTCTA	5953	False	NA	NA	False	NA	NA	NA	107866881	107866701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_107866700_107866900
ES.3612.1	chr10	-	181	1	Intergenic	novelGene_2757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGACG	NA	False	NA	NA	False	NA	NA	NA	93955784	93955603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_93955600_93955800
ES.36120.1	chr9	+	5861	9	NNC	ENSMUSG00000032595.11	novel	2480	19	NA	NA	-412	1	intron_retention	FALSE	canonical	0	0	junction_1	2.3418742493994	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGCCCACCTTGTAA	NA	False	NA	NA	False	AATAAA	-12	NA	107869283	107876877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107869373_107869505_107870231_107870332_107870496_107870575_107872280_107872448_107872586_107872781_107872966_107873066_107875262_107875711_107876227_107876728
ES.36120.2	chr9	+	5068	8	NNC	ENSMUSG00000032595.11	novel	2480	19	NA	NA	-78	2	intron_retention	FALSE	non_canonical	0	0	junction_3	1.9059520091609	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTTGTAATCTTTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	107869617	107876885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107869774_107870045_107870231_107870332_107872339_107872452_107872586_107872781_107874000_107874079_107875262_107876195_107876227_107876728
ES.36120.3	chr9	+	5367	10	NNC	ENSMUSG00000032595.11	novel	2480	19	NA	NA	-76	1	intron_retention	FALSE	canonical	0	0	junction_4	1.59474445493415	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAACACTGCCCACCT	NA	False	NA	NA	False	AATAAA	-7	NA	107869619	107876872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107869774_107870045_107870231_107870332_107870496_107870575_107872280_107872452_107872586_107872781_107873221_107873436_107873531_107873795_107874000_107874079_107876227_107876728
ES.36120.4	chr9	+	3154	16	NNC	ENSMUSG00000032595.11	novel	2480	19	NA	NA	-68	0	intron_retention	FALSE	canonical	0	0	junction_8	1.98214249964247	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACCTTGTAATCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	107869627	107876883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107869774_107870045_107870231_107870332_107870496_107870575_107870662_107871472_107871578_107872175_107872280_107872448_107872586_107872781_107872856_107873066_107873221_107873436_107874000_107874079_107874603_107874687_107875262_107875711_107875769_107875867_107875965_107876195_107876227_107876728
ES.36120.5	chr9	+	5061	10	NNC	ENSMUSG00000032595.11	novel	2480	19	NA	NA	-36	1	intron_retention	FALSE	canonical	0	0	junction_3	2.31474073955552	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAACACTGCCCACCT	NA	False	NA	NA	False	AATAAA	-7	NA	107869659	107876872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107869774_107870045_107870231_107870332_107872280_107872452_107874000_107874079_107874909_107875118_107875262_107875711_107875769_107875900_107875965_107876195_107876227_107876728
ES.36120.6	chr9	+	5419	5	Fusion	ENSMUSG00000079323.10_ENSMUSG00000093456.8	novel	601	4	NA	NA	-3169	4678	intron_retention	FALSE	canonical	0	0	junction_1	2.17944947177034	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCTTGTAATCTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	107870378	107876884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_107872280_107872452_107872586_107872781_107873221_107873436_107876227_107876728
ES.36120.7	chr9	+	3220	7	NIC	ENSMUSG00000093456.8	novel	1853	11	NA	NA	-1247	-32460	intron_retention	FALSE	canonical	1	1	junction_3	1.70782512765993	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGCCCACCTTGTAA	NA	False	NA	NA	False	AATAAA	-12	NA	107872300	107876877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107872586_107872781_107873221_107873436_107874000_107874079_107875769_107875900_107875965_107876195_107876227_107876728
ES.36120.8	chr9	+	3594	5	NIC	ENSMUSG00000032595.11	novel	560	6	NA	NA	-499	0	intron_retention	FALSE	canonical	1	1	junction_1	2.44948974278318	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACTGCCCACCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	107872389	107876876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107874000_107874079_107875262_107875711_107875769_107875900_107875965_107876195
ES.36121.1	chr9	+	5110	5	NNC	ENSMUSG00000032594.12	novel	786	5	NA	NA	-462	3	intron_retention	FALSE	canonical	0	0	junction_1	132.643083121586	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAAGTCTGTGTGAAAA	6258	False	NA	20	True	AATAAA	-20	NA	107879237	107925984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107879546_107901301_107901650_107909197_107909409_107918103_107918286_107921923
ES.36121.11	chr9	+	4864	5	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	-2	intron_retention	FALSE	canonical	3	34	junction_2	123.972527198569	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6848	False	NA	15	True	AATAAA	-15	NA	107879827	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923
ES.36121.12	chr9	+	4553	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_5	122.664746361781	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6848	False	NA	17	True	AATAAA	-17	NA	107879827	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922222_107922661
ES.36121.13	chr9	+	2332	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-13	-162	1	128	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGTCTCCCTTGCCT	6849	False	NA	NA	False	AATGAA	-8	NA	107879828	107923470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
ES.36121.14	chr9	+	4481	7	NNC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.052900534316	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6852	False	NA	15	True	AATAAA	-15	NA	107879831	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880022_107901301_107901650_107909197_107909409_107915817_107915874_107918103_107918286_107921923_107922100_107922661
ES.36121.15	chr9	+	4618	7	NIC	ENSMUSG00000032594.12	novel	2157	6	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_5	132.492767098183	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCAAGTCTGTGTGAA	6852	False	NA	18	True	AATAAA	-18	NA	107879831	107925982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922222_107922444_107922513_107922661
ES.36121.16	chr9	+	4512	6	NNC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.972938099385	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6852	False	NA	15	True	AATAAA	-15	NA	107879831	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880109_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ES.36121.17	chr9	+	4076	5	NIC	ENSMUSG00000032594.12	novel	880	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	119.309471543545	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6853	False	NA	15	True	AATAAA	-15	NA	107879832	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ES.36121.19	chr9	+	2194	5	NIC	ENSMUSG00000032594.12	novel	2157	6	NA	NA	0	6	intron_retention	FALSE	canonical	3	34	junction_2	123.972527198569	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGAATCCATATATAT	6853	False	NA	8	True	ACTAAA	-19	NA	107879832	107923314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923
ES.36121.2	chr9	+	4475	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	89	-5	-39	5	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTCTGTGTGAAAACT	6809	False	NA	22	True	AATAAA	-22	NA	107879788	107925986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ES.36121.20	chr9	+	7276	6	NNC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	128.855578070955	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6854	False	NA	15	True	AATAAA	-15	NA	107879833	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107920946_107921730_107922100_107922661
ES.36121.21	chr9	+	4364	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	130.254451832643	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6854	False	NA	15	True	AATAAA	-15	NA	107879833	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
ES.36121.23	chr9	+	4509	7	NNC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	132.777278009287	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGTCCAAGTCTGTG	6856	False	NA	14	True	AATAAA	-14	NA	107879835	107925978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922423_107922513_107922661
ES.36121.25	chr9	+	3530	3	NNC	ENSMUSG00000032594.12	novel	2251	3	NA	NA	11	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	178.5	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6876	False	NA	15	True	AATAAA	-15	NA	107879855	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880022_107901301_107901429_107922742
ES.36121.27	chr9	+	228	1	Intergenic	novelGene_29373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATTATTAAG	2432	False	NA	NA	False	AATATA	-27	NA	107890605	107890833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107890600_107890800
ES.36121.28	chr9	+	4306	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_4	115.522119094137	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	NA	False	NA	17	True	AATAAA	-17	NA	107901300	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
ES.36121.29	chr9	+	4009	4	NIC	ENSMUSG00000032594.12	novel	1244	5	NA	NA	-76	-4	intron_retention	FALSE	canonical	3	17	junction_3	129.636243217534	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGTCCAAGTCTGT	2303	False	NA	13	True	AATAAA	-13	NA	107909195	107925977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107909409_107918103_107918286_107921923_107922222_107922661
ES.36121.3	chr9	+	1905	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-8	37	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGGCTGTGACTGC	6840	False	NA	73	True	TATAAA	-43	NA	107879819	107923379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
ES.36121.30	chr9	+	3888	4	ISM	ENSMUSG00000032594.12	ENSMUST00000176566.2	786	5	7745	-3172	-76	-3	3prime_fragment	FALSE	canonical	3	206	junction_3	40.5407887880287	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTGTCCAAGTCTGTG	2303	False	NA	14	True	AATAAA	-14	NA	107909195	107925978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107909409_107918103_107918286_107921923_107922100_107922661
ES.36121.31	chr9	+	7507	3	NNC	ENSMUSG00000032594.12	novel	131	3	NA	NA	5362	0	intron_retention	FALSE	non_canonical	0	0	junction_1	146	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	2062	False	NA	17	True	AATAAA	-17	NA	107914633	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107914842_107915044_107918286_107921923
ES.36121.32	chr9	+	220	1	Intergenic	novelGene_29374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTTGTGAGACATGT	6410	False	NA	NA	False	NA	NA	NA	107921401	107921621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_107921400_107921600
ES.36121.4	chr9	+	4850	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-20	-2673	-6	0	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6842	False	NA	17	True	AATAAA	-17	NA	107879821	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
ES.36121.5	chr9	+	4505	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6842	False	NA	17	True	AATAAA	-17	NA	107879821	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
ES.36121.6	chr9	+	2397	5	ISM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-20	-71	-6	37	intron_retention	FALSE	canonical	3	292	junction_3	27.3541587331799	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTGGCTGTGACTGC	6842	False	NA	73	True	TATAAA	-43	NA	107879821	107923379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923
ES.36121.7	chr9	+	4376	6	NNC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.855578070955	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6842	False	NA	17	True	AATAAA	-17	NA	107879821	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918164_107918286_107921923_107922100_107922661
ES.36121.8	chr9	+	4308	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	111.90781920849	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTCCAAGTCTGTGT	6842	False	NA	15	True	AATAAA	-15	NA	107879821	107925979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ES.36121.9	chr9	+	4998	5	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	123	0	-5	0	intron_retention	FALSE	canonical	3	292	junction_3	27.3541587331799	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6843	False	NA	17	True	AATAAA	-17	NA	107879822	107925981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923
ES.36122.1	chr9	-	3878	2	Antisense	novelGene_ENSMUSG00000032594.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACATAAAGAAAAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107904238	107900165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_107903196_107903390
ES.36122.2	chr9	-	1021	2	Antisense	novelGene_ENSMUSG00000032594.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACATAAAGAAAAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	107904237	107900165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_107900335_107903385
ES.36123.1	chr9	+	1829	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	8	865	8	20	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGCTGGTTGATGCA	NA	False	NA	30	True	NA	NA	NA	107926448	107929135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ES.36123.2	chr9	+	1654	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	6	20	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGTGCTGGTTGATGCA	NA	False	NA	30	True	NA	NA	NA	107926473	107929135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ES.36123.3	chr9	+	1565	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	37	1100	10	-1	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGACTGGAAGTCAAG	NA	False	NA	28	True	NA	NA	NA	107926477	107928900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ES.36123.4	chr9	+	1473	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	-45	1	-9	-1	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGACTGGAAGTCAAG	NA	False	NA	28	True	NA	NA	NA	107926478	107928900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ES.36123.5	chr9	+	1530	9	NNC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	6	junction_1	39.1471582621268	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGACTGGAAGTCAAG	NA	False	NA	28	True	NA	NA	NA	107926478	107928900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107926594_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928442_107928524
ES.36123.6	chr9	+	1489	9	NIC	ENSMUSG00000070284.11	novel	2702	9	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41.105808591974	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCAGTCCTTGTTGTT	NA	False	NA	9	True	NA	NA	NA	107926483	107929114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107926561_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ES.36123.8	chr9	+	1612	6	FSM	ENSMUSG00000070284.11_ENSMUSG00000092218.2	ENSMUST00000145330.3	1052	6	-164	-396	2	-1	multi-exon	FALSE	canonical	1	1	junction_4	49.4085012927937	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCAGTCCTTGTTGTT	NA	False	NA	9	True	NA	NA	NA	107926489	107929114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107928047_107928442_107928524
ES.36124.1	chr9	+	2736	14	Antisense	novelGene_ENSMUSG00000041528.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGACGTGATGGCCTGT	7598	False	NA	NA	False	NA	NA	NA	107943505	107949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107943605_107943821_107943893_107944052_107944116_107944293_107944394_107944594_107944716_107945322_107945572_107945674_107945804_107946192_107947000_107947145_107947217_107947417_107947502_107947742_107947829_107947923_107947976_107948345_107948444_107948575
ES.36124.2	chr9	+	2924	13	Antisense	novelGene_ENSMUSG00000041528.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGACGTGATGGCCTGT	7598	False	NA	NA	False	NA	NA	NA	107943505	107949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107943605_107943821_107943893_107944052_107944116_107944293_107944716_107945322_107945558_107945673_107945804_107946192_107947000_107947145_107947217_107947417_107947502_107947742_107947829_107947923_107947976_107948345_107948444_107948575
ES.36124.3	chr9	+	4475	7	Antisense	novelGene_ENSMUSG00000041528.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	7693	False	NA	NA	False	NA	NA	NA	107943600	107949264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107946999_107947145_107947217_107947417_107947502_107947742_107947829_107947923_107947970_107948341_107948444_107948576
ES.36124.4	chr9	+	4496	7	Antisense	novelGene_ENSMUSG00000041528.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGACGTGATGGCCTGT	7693	False	NA	NA	False	NA	NA	NA	107943600	107949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107947000_107947145_107947217_107947417_107947502_107947742_107947829_107947923_107947976_107948345_107948444_107948575
ES.36124.5	chr9	+	5292	2	Antisense	novelGene_ENSMUSG00000041528.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGACGTGATGGCCTGT	7693	False	NA	NA	False	NA	NA	NA	107943600	107949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_107945804_107946192
ES.36125.1	chr9	-	4282	39	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	19.2939249549231	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGCCCGCTCTTCTTG	NA	False	NA	-1	True	ATTAAA	-17	NA	107956535	107928869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944673_107945292_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.10	chr9	-	4150	38	NNC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	23.0758586407693	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956505	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943895_107944053_107944116_107944293_107944394_107944594_107944673_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.11	chr9	-	3793	23	NNC	ENSMUSG00000041528.16	novel	4426	39	NA	NA	-4925	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.0542382507368	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107944113	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107935213_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107941531_107941651_107942884_107942987_107943483_107943605_107943821_107943894_107944053
ES.36125.12	chr9	-	4685	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_38	16.5285784572411	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGGGCCCGCTCTTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	107956477	107928871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.13	chr9	-	4202	39	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_38	17.6645606682167	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGGGCCCGCTCTTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	107956521	107928871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955039_107956467
ES.36125.14	chr9	-	9051	37	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_25	18.5224880004927	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956480	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945572_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.15	chr9	-	5367	38	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_8	18.9560253868271	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956495	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107935213_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.16	chr9	-	4612	38	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	15	-2	intron_retention	FALSE	canonical	3	35	junction_17	14.0519229153415	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956485	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.17	chr9	-	4735	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	20.9287969777598	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956494	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.19	chr9	-	4384	40	NNC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	20.8853669726718	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956496	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998_107956131_107956467
ES.36125.2	chr9	-	4291	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	23	-5	23	0	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956551	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.20	chr9	-	4641	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_38	18.7621982481396	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956474	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955039_107955998
ES.36125.21	chr9	-	10278	32	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	25	junction_14	14.9095085206999	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGGGCCCGCTCTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	107956501	107928872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929320_107929412_107929508_107929643_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944713_107945320_107945559_107945674_107945801_107946189_107946295_107946370_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.22	chr9	-	4051	37	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	23.0980699049365	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107956533	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943895_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.23	chr9	-	4316	39	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	22.2405011003951	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107956536	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944673_107945233_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946482_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.24	chr9	-	4725	4	NIC	ENSMUSG00000041528.16	novel	4658	38	NA	NA	224	2	intron_retention	FALSE	canonical	3	75	junction_1	7.78888096369861	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107934014	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929320_107929412_107933321_107933555_107933632_107933719
ES.36125.25	chr9	-	4766	39	NNC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.1008657973108	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107956476	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934221_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.26	chr9	-	3309	29	NIC	ENSMUSG00000041528.16	novel	4426	39	NA	NA	3888	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	18.4592767452894	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107946432	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370
ES.36125.27	chr9	-	3659	1	NIC	ENSMUSG00000041528.16	novel	4426	39	NA	NA	1706	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCTGGGCCCGCTCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	107932532	107928873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107928900_107932500
ES.36125.29	chr9	-	4274	39	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	18.1024515870808	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956522	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955114_107956467
ES.36125.3	chr9	-	4248	39	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	21.5973765976397	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956533	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946373_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954569_107954633_107954920_107955097_107956467
ES.36125.30	chr9	-	4566	38	NNC	ENSMUSG00000041528.16	novel	4722	39	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.3001080657837	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956486	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946484_107946871_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.31	chr9	-	4150	38	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	19.0076298547556	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956529	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944673_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.32	chr9	-	5582	39	NNC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.1008657973108	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956302	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107935213_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.33	chr9	-	4322	38	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	1	0	intron_retention	FALSE	canonical	3	35	junction_16	14.2589021057806	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956499	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.35	chr9	-	6027	37	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-28	0	intron_retention	FALSE	canonical	3	35	junction_17	13.1130824789126	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956532	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.38	chr9	-	4341	38	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_16	14.2172438226896	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956532	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.39	chr9	-	6104	36	NIC	ENSMUSG00000041528.16	novel	4722	39	NA	NA	1	0	intron_retention	FALSE	canonical	1	2	junction_6	19.1032425925815	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956499	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.41	chr9	-	9339	36	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-25	0	intron_retention	FALSE	canonical	1	2	junction_5	17.1549957024483	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956529	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.42	chr9	-	4691	39	NNC	ENSMUSG00000041528.16	novel	4722	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	21.0582229417063	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956471	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946478_107946868_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.43	chr9	-	5942	39	NNC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.0585851783216	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956483	107928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933648_107933719_107933909_107934014_107935213_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107948161_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.45	chr9	-	4358	38	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	25	junction_16	15.0954111903775	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACAGCCCTGGGCCCGCT	NA	False	NA	-8	True	ATTAAA	-10	NA	107956532	107928876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.47	chr9	-	4471	35	ISM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	20	3988	-15	239	5prime_fragment	FALSE	canonical	3	15	junction_34	17.9826184821357	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCACAGTGCTGCCAG	NA	False	NA	NA	False	NA	NA	NA	107956480	107932858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.48	chr9	-	3845	35	NIC	ENSMUSG00000041528.16	novel	3789	35	NA	NA	3	-9	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	15.5326701127156	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAAGAGTAACTGGTGA	NA	False	NA	NA	False	AATGAA	-26	NA	107956571	107933106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.49	chr9	-	4206	35	NIC	ENSMUSG00000041528.16	novel	3919	37	NA	NA	-5	-14	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	21.2589081674151	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGGCAAAGAGTAACT	NA	False	NA	NA	False	AATGAA	-21	NA	107956470	107933111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.5	chr9	-	4102	38	NIC	ENSMUSG00000041528.16	novel	4309	39	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.8131405826594	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956505	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.50	chr9	-	3772	35	NNC	ENSMUSG00000041528.16	novel	3789	35	NA	NA	6	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.9834923223626	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGGCAAAGAGTAACT	NA	False	NA	NA	False	AATGAA	-21	NA	107956494	107933111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940060_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.51	chr9	-	3882	33	ISM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	30	4890	-5	-2	5prime_fragment	FALSE	canonical	3	15	junction_32	18.2061759782223	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCCTACCTCTGAGATG	NA	False	NA	NA	False	NA	NA	NA	107956470	107933760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ES.36125.52	chr9	-	168	1	Intergenic	novelGene_29375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGAAATGATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	107951873	107951705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_107951700_107951900
ES.36125.6	chr9	-	4330	39	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_17	14.9572798866187	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956572	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ES.36125.7	chr9	-	5688	38	ISM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	-3	-5	-3	0	intron_retention	FALSE	canonical	3	35	junction_17	13.2204989468331	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956577	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36125.9	chr9	-	5630	38	NIC	ENSMUSG00000041528.16	novel	4727	39	NA	NA	15	0	intron_retention	FALSE	canonical	1	2	junction_6	18.7644660533506	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956485	107928870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933648_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920
ES.36126.1	chr9	+	2807	13	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-26	1	intron_retention	FALSE	canonical	3	19	junction_7	9.0046284394934	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATAGAGTGCTTCTTAG	6637	False	NA	14	True	CATAAA	-19	NA	107957608	107962198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107961594_107961691_107961832_107961972
ES.36126.10	chr9	+	2760	14	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	0	2	intron_retention	FALSE	canonical	3	27	junction_8	6.80497555526045	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	6681	False	NA	15	True	CATAAA	-20	NA	107957652	107962199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107961594_107961691_107961832_107961972
ES.36126.11	chr9	+	2319	17	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	16	junction_12	9.3674969975976	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATAGAGTGCTTCTTA	6685	False	NA	13	True	CATAAA	-18	NA	107957656	107962197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.13	chr9	+	3354	7	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	26	0	intron_retention	FALSE	canonical	0	0	junction_2	13.8403596613511	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6736	False	NA	18	True	CATAAA	-23	NA	107957707	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107957730_107958343_107958496_107958583_107958697_107958782_107959521_107959663_107960331_107960452_107960590_107960677
ES.36126.14	chr9	+	1892	11	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	1517	0	intron_retention	FALSE	canonical	3	16	junction_6	9.66902270139025	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	8227	False	NA	18	True	CATAAA	-23	NA	107959198	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107959321_107959401_107959521_107959663_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.15	chr9	+	2008	10	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	1517	2	intron_retention	FALSE	canonical	3	16	junction_6	10.1653004546513	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	8227	False	NA	15	True	CATAAA	-20	NA	107959198	107962199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107959321_107959401_107959521_107959663_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.17	chr9	+	1903	6	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-1717	0	intron_retention	FALSE	canonical	2	2	junction_4	16.9658480483588	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	8815	False	NA	18	True	CATAAA	-23	NA	107959786	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960797_107961832_107961972
ES.36126.18	chr9	+	1756	6	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-1529	1	intron_retention	FALSE	canonical	3	27	junction_1	7.96492310069595	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTATAGAGTGCTTCT	9003	False	NA	11	True	CATAAA	-16	NA	107959974	107962195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107961594_107961691
ES.36126.2	chr9	+	3177	10	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	35	junction_1	6.0736223860962	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGAGTGCTTCTTAGTT	6651	False	NA	16	True	CATAAA	-21	NA	107957622	107962200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959321_107959401_107960331_107960452_107960590_107960677_107960714_107960792_107961594_107961691_107961832_107961972
ES.36126.3	chr9	+	2235	18	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.4592067929718	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTATAGAGTGCTTCT	6654	False	NA	11	True	CATAAA	-16	NA	107957625	107962195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958372_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.4	chr9	+	2654	16	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	11.5739170359717	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6660	False	NA	18	True	CATAAA	-23	NA	107957631	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959590_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.5	chr9	+	2621	15	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	-2	0	intron_retention	FALSE	canonical	2	2	junction_10	12.6525386659705	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6661	False	NA	18	True	CATAAA	-23	NA	107957632	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960797_107960902_107961062_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.6	chr9	+	2410	17	NNC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	3	2	intron_retention	FALSE	canonical	2	2	junction_11	11.8662796928945	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGAGTGCTTCTTAGT	6666	False	NA	15	True	CATAAA	-20	NA	107957637	107962199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960797_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.7	chr9	+	3422	8	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	33	junction_4	5.74988908499946	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6669	False	NA	18	True	CATAAA	-23	NA	107957640	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107959119_107959199_107959321_107959401_107960590_107960677_107961594_107961691
ES.36126.8	chr9	+	2693	15	NIC	ENSMUSG00000032591.16	novel	2262	18	NA	NA	8	0	intron_retention	FALSE	canonical	3	27	junction_8	6.60279779907807	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6671	False	NA	18	True	CATAAA	-23	NA	107957642	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107961407_107961486_107961594_107961691_107961832_107961972
ES.36126.9	chr9	+	2253	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	9	0	9	0	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6672	False	NA	18	True	CATAAA	-23	NA	107957643	107962202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ES.36127.1	chr9	-	2485	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	70	-37	-57	37	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGCCTCTACCTTGG	NA	False	NA	5	True	NA	NA	NA	107971735	107962574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.10	chr9	-	3570	17	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	79	-1	intron_retention	FALSE	canonical	3	143	junction_14	19.5511148978773	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971561	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107963252_107963337_107963529_107963621_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970948_107971425
ES.36127.11	chr9	-	5106	10	NIC	ENSMUSG00000032590.15	novel	2517	21	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	143	junction_8	18.0541025056343	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971685	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107964303_107964379_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969379_107969474_107969917_107970005_107970082_107970179
ES.36127.12	chr9	-	2402	22	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	43.0608386781354	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971671	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107969985_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.13	chr9	-	2513	21	FSM	ENSMUSG00000032590.15	ENSMUST00000194915.6	2517	21	3	1	3	-1	multi-exon	FALSE	canonical	3	126	junction_20	23.458687090287	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971662	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.14	chr9	-	2449	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	3	-1	intron_retention	FALSE	canonical	3	126	junction_20	23.4803641368698	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971662	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.16	chr9	-	3523	16	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_9	62.2744463376967	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971671	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967429_107968441_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
ES.36127.17	chr9	-	2314	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	-54	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	42.4109360896456	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTGGTCTGTGCTGGT	NA	False	NA	-36	True	AATAAA	-10	NA	107971732	107962615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
ES.36127.18	chr9	-	2617	17	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	1006	-3	intron_retention	FALSE	canonical	0	0	junction_7	47.2489665892282	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTGGTCTGTGCTGGT	NA	False	NA	-36	True	AATAAA	-10	NA	107970213	107962615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107964303_107964379_107964464_107964921_107965061_107965459_107965540_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179
ES.36127.19	chr9	-	2602	20	NIC	ENSMUSG00000032590.15	novel	2517	21	NA	NA	3	-3	intron_retention	FALSE	canonical	3	126	junction_19	23.8817493106871	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTGGTCTGTGCTGGT	NA	False	NA	-36	True	AATAAA	-10	NA	107971672	107962615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969211_107969286_107969379_107969474_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.2	chr9	-	2214	21	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	0	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.2056419926842	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGCCTCTACCTTGG	NA	False	NA	5	True	NA	NA	NA	107971665	107962574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963417_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.20	chr9	-	3056	19	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	12	-3	intron_retention	FALSE	canonical	3	126	junction_18	21.0719666328935	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTGGTCTGTGCTGGT	NA	False	NA	-36	True	AATAAA	-10	NA	107971653	107962615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963252_107963337_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.4	chr9	-	4394	13	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	6	junction_8	49.1044097363521	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	False	NA	-32	True	AATAAA	-14	NA	107971674	107962611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107964303_107964379_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107969379_107969474_107969917_107969989_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.5	chr9	-	3386	20	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_5	58.121374577908	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971671	107962612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107964126_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967429_107968441_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.6	chr9	-	4253	15	NIC	ENSMUSG00000032590.15	novel	2517	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	126	junction_14	24.5253929216064	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971673	107962612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107969379_107969474_107969917_107970005_107970082_107970179_107971559_107971633
ES.36127.7	chr9	-	3533	14	NIC	ENSMUSG00000032590.15	novel	2517	21	NA	NA	-12	0	intron_retention	FALSE	canonical	0	0	junction_7	52.4750715682663	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971652	107962612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963711_107964221_107964303_107964379_107964464_107964921_107965114_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107969379_107969474_107970274_107970820_107970948_107971425
ES.36127.8	chr9	-	3719	17	NNC	ENSMUSG00000032590.15	novel	2517	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_2	59.2204237890105	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971680	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963090_107963148_107963252_107963337_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107969211_107969286_107969379_107969474_107969917_107969989_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ES.36127.9	chr9	-	2271	21	NNC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_17	54.6016483267676	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTCTGTGCTGGTAC	NA	False	NA	-34	True	AATAAA	-12	NA	107971671	107962613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107969989_107970082_107970179_107970274_107971425_107971559_107971633
ES.36128.1	chr9	-	4283	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5498	2	5498	-2	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACAGTCTCGGGGTGAT	3801	False	NA	-3	True	AATAAA	-22	NA	107982114	107973223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
ES.36128.2	chr9	-	1779	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5475	2529	5475	-2529	3prime_fragment	FALSE	canonical	3	14	junction_1	4.12310562561766	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGAAACTGGATAGCT	3778	False	NA	NA	False	AATAAA	-38	NA	107982137	107975750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
ES.36128.3	chr9	-	1342	6	NNC	ENSMUSG00000032589.15	novel	7496	8	NA	NA	5505	-3057	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.98799279134702	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTTTTGTTGTTGTT	3808	False	NA	NA	False	NA	NA	NA	107982107	107976278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_107977097_107980168_107980290_107980388_107980482_107980862_107980918_107981142_107981275_107981984
ES.36129.1	chr9	+	184	1	Intergenic	novelGene_29376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAACAATATATGA	7434	False	NA	NA	False	NA	NA	NA	108010081	108010265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108010100_108010300
ES.3613.1	chr10	+	2347	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-142	1527	-142	3	multi-exon	FALSE	canonical	3	23	junction_4	6	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCGTTCTCTTCCTGTT	NA	False	NA	3	True	AATAAA	-19	NA	93983742	94031546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.2	chr10	+	3878	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-141	-5	-141	5	multi-exon	FALSE	canonical	3	23	junction_4	6	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATCCTGTCAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	93983743	94033078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.3	chr10	+	3753	13	NIC	ENSMUSG00000005897.15	novel	3732	14	NA	NA	-133	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.3289641300568	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTGTCAATGTATTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	93983751	94033083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.4	chr10	+	5165	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-84	-1349	-84	1349	multi-exon	FALSE	canonical	3	23	junction_4	6	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATCTTATTCTTTGCAA	NA	False	NA	NA	False	AATAAA	-25	NA	93983800	94034422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.5	chr10	+	3763	12	NIC	ENSMUSG00000005897.15	novel	3732	14	NA	NA	-70	3	intron_retention	FALSE	canonical	0	0	junction_8	10.6351980713351	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCGTTCTCTTCCTGTT	NA	False	NA	3	True	AATAAA	-19	NA	93983814	94031546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.6	chr10	+	2172	13	NNC	ENSMUSG00000005897.15	novel	3732	14	NA	NA	5450	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.63356401107895	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCGTTCTCTTCCTGTT	NA	False	NA	3	True	AATAAA	-19	NA	93997597	94031546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_93997718_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.7	chr10	+	2540	5	ISM	ENSMUSG00000005897.15	ENSMUST00000099343.2	2413	13	25206	-1857	25206	-3	3prime_fragment	FALSE	canonical	3	25	junction_3	5.78791845139511	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAAATTTCTGTATCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	94017353	94033070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ES.3613.8	chr10	+	7566	1	Genic_Genomic	ENSMUSG00000005897.15	novel	NA	NA	NA	NA	33365	5	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTATCCTGTCAATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	94025512	94033078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_94025500_94033100
ES.36130.1	chr9	+	3147	3	NNC	ENSMUSG00000102224.6	novel	1341	3	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAGATTCTAAGTTT	8245	False	NA	NA	False	ATTAAA	-20	NA	108010892	108015766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108010990_108012619_108014766_108014862
ES.36131.1	chr9	+	158	1	Intergenic	novelGene_29377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	108073689	108073847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108073700_108073800
ES.36132.1	chr9	-	131	1	Intergenic	novelGene_29378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	3025	False	NA	NA	False	NA	NA	NA	108080325	108080194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108080200_108080300
ES.36133.1	chr9	+	179	1	Intergenic	novelGene_29381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108129594	108129773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108129600_108129800
ES.36134.1	chr9	+	180	1	Intergenic	novelGene_29382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108130418	108130598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108130400_108130600
ES.36135.1	chr9	+	177	1	Intergenic	novelGene_29385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATACTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	108132642	108132819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108132600_108132800
ES.36136.1	chr9	+	245	1	Intergenic	novelGene_29386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTGTTTCCTTGTTTT	NA	False	NA	NA	False	AAAAAG	-41	NA	108133060	108133305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108133100_108133300
ES.36136.10	chr9	+	2165	8	NIC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	19	0	intron_retention	FALSE	canonical	3	166	junction_4	16.1042521954765	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174087	108179501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ES.36136.11	chr9	+	1856	10	NNC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	61.6044731420626	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTATGGTCTCTAGCT	NA	False	NA	15	True	AATAAA	-16	NA	108174115	108179495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518_108178873_108179045
ES.36136.12	chr9	+	3318	5	NIC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	179	junction_1	16.1554944214035	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174116	108179501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108174992_108175966_108177090_108177732_108177914_108178271_108178428_108178518
ES.36136.13	chr9	+	2125	8	ISM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	48	0	-4	0	intron_retention	FALSE	canonical	3	166	junction_5	13.1583759310508	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174116	108179501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271
ES.36136.14	chr9	+	1592	9	NNC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	156	43591	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	65.1685315163692	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCTGCCTCTGCCTCCC	NA	False	NA	NA	False	NA	NA	NA	108174276	108223092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518_108179001_108222975
ES.36136.15	chr9	+	2438	10	Fusion	ENSMUSG00000032607.13_ENSMUSG00000007815.14	novel	1354	9	NA	NA	1878	4	multi-exon	FALSE	canonical	0	0	junction_5	678.986463255307	845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATTCTCTTGTGTGTTG	NA	False	NA	19	True	AATAAA	-19	NA	108175998	108215137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.16	chr9	+	1803	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	41	353	41	-353	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTCCCATTTTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	108183368	108214780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.17	chr9	+	2141	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	64	-8	64	8	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTGTGTGTTGCTTT	NA	False	NA	23	True	AATAAA	-23	NA	108183391	108215141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.18	chr9	+	1004	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	134	1059	134	124	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATGATTACTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	108183461	108214074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.2	chr9	+	351	4	Intergenic	novelGene_29387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTTGAGAAATAGCC	NA	False	NA	NA	False	NA	NA	NA	108133065	108210532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108133269_108154235_108154297_108203860_108203902_108210486
ES.36136.21	chr9	+	1516	6	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-150	-523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	606.29313042455	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATGTAGTATTTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	108183487	108214610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212383_108213846
ES.36136.22	chr9	+	1512	6	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-143	-525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	602.339107148125	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTAGATGTAGTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	108183494	108214608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192582_108204775_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.23	chr9	+	1328	4	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-121	-357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	696.974573105472	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAAATTCCCATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	108183516	108214776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192536_108212247_108212381_108213846
ES.36136.26	chr9	+	1124	4	NIC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-39	-523	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	695.560365620571	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATGTAGTATTTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	108183598	108214610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108183753_108192506_108192582_108212249_108212381_108213846
ES.36136.29	chr9	+	1910	6	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-21	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	593.417694377241	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTTGTGTGTTGCTTT	NA	False	NA	23	True	AATAAA	-23	NA	108183616	108215141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192582_108204782_108204931_108208065_108208191_108212249_108212381_108213846
ES.36136.3	chr9	+	178	1	Intergenic	novelGene_29388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCAACATTG	NA	False	NA	NA	False	NA	NA	NA	108144352	108144530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108144400_108144500
ES.36136.30	chr9	+	1581	4	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	696.974573105472	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTATTCTCTTGTGTGT	NA	False	NA	17	True	AATAAA	-17	NA	108183622	108215135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192536_108212247_108212381_108213846
ES.36136.31	chr9	+	1052	4	NNC	ENSMUSG00000007815.14	novel	2197	6	NA	NA	-13	-525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	696.974573105472	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTAGATGTAGTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	108183624	108214608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108183753_108192506_108192536_108212247_108212381_108213846
ES.36136.32	chr9	+	2841	5	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	298	524	-12	-524	intron_retention	FALSE	canonical	3	1457	junction_4	50.6236110920586	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGATGTAGTATTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	108183625	108214609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249
ES.36136.33	chr9	+	1548	6	FSM	ENSMUSG00000007815.14	ENSMUST00000194701.6	852	6	-19	-677	-19	-523	multi-exon	FALSE	canonical	3	21	junction_1	597.472543302201	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATGTAGTATTTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	108183976	108214610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108184276_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.34	chr9	+	2008	6	FSM	ENSMUSG00000007815.14	ENSMUST00000194701.6	852	6	41	-1197	9	-3	multi-exon	FALSE	canonical	3	21	junction_1	597.472543302201	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTGTATTCTCTTG	NA	False	NA	12	True	AATAAA	-12	NA	108184036	108215130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108184276_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ES.36136.35	chr9	+	4438	2	Intergenic	novelGene_29394	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACACACTATAGCTTCTG	NA	False	NA	NA	False	NA	NA	NA	108197953	108203901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108198106_108199615
ES.36136.36	chr9	+	176	1	Intergenic	novelGene_29395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATGTATTATT	NA	False	NA	NA	False	NA	NA	NA	108199350	108199526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108199400_108199500
ES.36136.37	chr9	+	656	1	Intergenic	novelGene_29397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	659	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAGAAATAGCCCCTG	NA	False	NA	NA	False	NA	NA	NA	108209880	108210536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108209900_108210500
ES.36136.38	chr9	+	1072	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	5	-5	5	5	multi-exon	FALSE	canonical	3	8868	junction_1	0	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCCTGTGTCATTGTC	NA	False	NA	23	True	AATAAA	-23	NA	108216257	108217547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108216758_108216975
ES.36136.4	chr9	+	176	1	Intergenic	novelGene_29389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGGTGGTTGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	108159467	108159643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108159500_108159600
ES.36136.40	chr9	+	857	2	NNC	ENSMUSG00000063856.9	novel	1072	2	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	0	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTGTTTGTGTGTCCTG	NA	False	NA	13	True	AATAAA	-13	NA	108216472	108217537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108216758_108216965
ES.36136.41	chr9	+	833	2	NNC	ENSMUSG00000063856.9	novel	1072	2	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTGTGTGTCCTGTG	NA	False	NA	15	True	AATAAA	-15	NA	108216476	108217539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108216758_108216987
ES.36136.42	chr9	+	835	2	NNC	ENSMUSG00000063856.9	novel	1072	2	NA	NA	2	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	0	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTGTTTGTGTGTCCT	NA	False	NA	12	True	AATAAA	-12	NA	108216476	108217536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108216751_108216975
ES.36136.44	chr9	+	176	1	Intergenic	novelGene_29398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTATTTAA	NA	False	NA	NA	False	NA	NA	NA	108222144	108222320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108222100_108222300
ES.36136.5	chr9	+	2157	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	-24	0	-24	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167603	108173697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ES.36136.6	chr9	+	1055	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	20	1058	5	660	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTGTTGTTTTGACA	NA	False	NA	NA	False	GATAAA	-20	NA	108167647	108172639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ES.36136.7	chr9	+	2231	6	NNC	ENSMUSG00000032606.8	novel	2133	6	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.314662644421	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTGTGTCAGCTGCTT	NA	False	NA	12	True	NA	NA	NA	108167647	108173695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108167862_108170534_108170712_108171009_108171244_108171644_108171717_108172087_108172193_108172266
ES.36136.8	chr9	+	2524	5	NIC	ENSMUSG00000032606.8	novel	2133	6	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	101	junction_4	4.81534007106456	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGACTGTGTCAGCT	NA	False	NA	8	True	NA	NA	NA	108167648	108173691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108167862_108170534_108171244_108171644_108171717_108172087_108172193_108172266
ES.36136.9	chr9	+	2068	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	14	0	14	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174082	108179501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ES.36137.1	chr9	-	5660	3	NIC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	17	-227	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	230.5	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCTGACTGTCTATTT	NA	False	NA	70	True	AATAAA	-25	NA	108141140	108082059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108140679
ES.36137.11	chr9	-	5546	3	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-18	-232	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	227.5	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141175	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108140823
ES.36137.12	chr9	-	5435	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	6	-232	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	188.076281067018	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141111	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095248_108095288_108095610_108130207_108130357_108140978
ES.36137.13	chr9	-	5354	4	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	30	-232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	191.816463202603	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141087	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095604_108130299_108130357_108140978
ES.36137.14	chr9	-	5694	5	NIC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	27	-232	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	191.259476889382	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140987	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108120087_108120223_108130299_108130357_108140679
ES.36137.15	chr9	-	5515	4	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	7	-232	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	175.562587763516	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141150	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140978
ES.36137.16	chr9	-	5414	4	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-1	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.830866412811	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140951	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130299_108130392_108140823
ES.36137.17	chr9	-	5535	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-17	-232	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	242.64621880425	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141134	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130299_108130357_108133537_108133666_108140978
ES.36137.18	chr9	-	5568	6	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	7	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.37192959459	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141110	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108120087_108120223_108123684_108123735_108130299_108130357_108140978
ES.36137.19	chr9	-	5342	4	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	1	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	191.816463202603	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141156	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095528_108130304_108130357_108140978
ES.36137.2	chr9	-	5466	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	-31	227	-31	-227	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCTGACTGTCTATTT	NA	False	NA	70	True	AATAAA	-25	NA	108141188	108082059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
ES.36137.20	chr9	-	5320	4	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-29	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.007523000764	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140979	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095528_108130304_108130357_108140823
ES.36137.21	chr9	-	5444	4	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-11201	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	230.830866412811	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	9126	False	NA	65	True	AATAAA	-20	NA	108152358	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130299_108130357_108152165
ES.36137.22	chr9	-	5468	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-28	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.932681413961	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140978	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108093711_108093774_108095211_108095610_108130299_108130357_108140823
ES.36137.23	chr9	-	5284	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-28	-232	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	200.832486166955	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141185	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095323_108095496_108095610_108130299_108130357_108140978
ES.36137.24	chr9	-	5523	5	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	2	-232	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	191.103375166427	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141115	108082064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108120087_108120223_108130299_108130357_108140978
ES.36137.25	chr9	-	5259	5	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-27	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.730954382744	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTGCCTCTGACTGT	NA	False	NA	64	True	AATAAA	-19	NA	108140977	108082065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108083840_108083984_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.26	chr9	-	5468	5	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	1	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.730954382744	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141156	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108083964_108084077_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.28	chr9	-	5339	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	2	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.97895930022	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141115	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108083136_108083182_108086861_108095211_108095610_108130299_108130357_108140978
ES.36137.29	chr9	-	5355	5	NNC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	-26	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.933805935253	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140976	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108082573_108082763_108086861_108095211_108095610_108130299_108130357_108140679
ES.36137.3	chr9	-	5597	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-150	-1083	-7	-227	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCTGACTGTCTATTT	NA	False	NA	70	True	AATAAA	-25	NA	108141164	108082059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.32	chr9	-	5519	5	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-15	-234	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	242.89812679393	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140965	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130299_108130357_108133537_108133666_108140823
ES.36137.33	chr9	-	5391	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	3	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.094674335278	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141154	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108082761_108082870_108086861_108095211_108095610_108130207_108130341_108140978
ES.36137.34	chr9	-	4644	5	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-12	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.730954382744	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140962	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108082430_108083173_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.35	chr9	-	5174	5	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	4	-234	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	200.069206776055	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141153	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095323_108095572_108095610_108130299_108130357_108140978
ES.36137.36	chr9	-	5030	4	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-15	-234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.725231398176	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140965	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095572_108095610_108130299_108130357_108140823
ES.36137.37	chr9	-	5573	5	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	2	-234	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	187.443824918294	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108141012	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108120087_108120223_108130299_108130357_108140823
ES.36137.38	chr9	-	5502	5	NNC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	-23	-234	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.933805935253	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCATTGCCTCTGACTG	NA	False	NA	63	True	AATAAA	-18	NA	108140973	108082066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108083135_108083175_108086861_108095211_108095610_108130299_108130357_108140679
ES.36137.4	chr9	-	5740	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-228	-1097	-6	-227	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTCTGACTGTCTATTT	NA	False	NA	70	True	AATAAA	-25	NA	108141163	108082059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
ES.36137.40	chr9	-	5574	4	NNC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	-13	-236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	206.931550679607	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTCATTGCCTCTGAC	NA	False	NA	61	True	AATAAA	-16	NA	108140963	108082068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130256_108130357_108140679
ES.36137.41	chr9	-	4544	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	72	-252	-7	252	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGATGTCTGAGTTA	NA	False	NA	NA	False	AAGAAA	-17	NA	108140942	108082890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.42	chr9	-	4516	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	-61	-40	18	26	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGTATAAGCTCCTAG	NA	False	NA	49	True	ATTAAA	-35	NA	108140996	108083116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
ES.36137.43	chr9	-	4259	3	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-7	24	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	227.5	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTATAAGCTCCT	NA	False	NA	47	True	ATTAAA	-33	NA	108140942	108083118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108140823
ES.36137.44	chr9	-	4380	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	-6	1288	-6	22	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGTTTGTATAAGCTC	NA	False	NA	45	True	ATTAAA	-31	NA	108141163	108083120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
ES.36137.45	chr9	-	4523	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	-149	-10	-6	10	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATGCTTAGCAGCAGT	NA	False	NA	33	True	ATTAAA	-19	NA	108141163	108083132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.46	chr9	-	4242	4	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	49	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.40352509594	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATGCTTAGCAGCAGT	NA	False	NA	33	True	ATTAAA	-19	NA	108141068	108083132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086866_108095247_108095610_108130299_108130357_108140978
ES.36137.47	chr9	-	4593	5	NNC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	-12	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	243.150544930502	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGATGCTTAGCAGCAG	NA	False	NA	32	True	ATTAAA	-18	NA	108140962	108083133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095610_108130299_108130357_108133537_108133666_108140679
ES.36137.48	chr9	-	4533	3	NIC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	6	-1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	230.5	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTAAAAAAAAAAAGATTA	NA	False	NA	8	True	ACTAAA	-26	NA	108141111	108083157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108140679
ES.36137.49	chr9	-	3564	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	-30	2128	-30	-804	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGCTGTTTACCTAAAC	NA	False	NA	NA	False	NA	NA	NA	108141187	108083960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
ES.36137.5	chr9	-	5712	4	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	-31	-228	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	177.122054590111	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTCTGACTGTCTATT	NA	False	NA	69	True	AATAAA	-24	NA	108141188	108082060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140823
ES.36137.50	chr9	-	3523	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	23	818	23	-804	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGCTGTTTACCTAAAC	NA	False	NA	NA	False	NA	NA	NA	108140991	108083960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ES.36137.51	chr9	-	2470	1	Intergenic	novelGene_29379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3673	False	NA	NA	False	NA	NA	NA	108122877	108120407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108120400_108122900
ES.36137.52	chr9	-	1909	2	Intergenic	novelGene_29380	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	614	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9115	False	NA	NA	False	NA	NA	NA	108126287	108120414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108121368_108125331
ES.36137.53	chr9	-	335	1	Intergenic	novelGene_29383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAGATGCTGGAATT	8297	False	NA	NA	False	AAGAAA	-18	NA	108131156	108130821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108130800_108131200
ES.36137.54	chr9	-	192	1	Intergenic	novelGene_29384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	8297	False	NA	NA	False	NA	NA	NA	108131156	108130964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108131000_108131200
ES.36137.55	chr9	-	5268	1	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	6	-5805	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAAGTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	108141111	108135843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108135800_108141100
ES.36137.6	chr9	-	5195	5	NNC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	1	-228	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	204.949383995171	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTCTGACTGTCTATT	NA	False	NA	69	True	AATAAA	-24	NA	108141013	108082060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108086861_108095211_108095323_108095572_108095610_108130299_108130357_108140823
ES.36137.8	chr9	-	5402	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	-67	-1091	-27	-230	multi-exon	FALSE	canonical	3	32	junction_2	218.5	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCTCTGACTGTCTA	NA	False	NA	67	True	AATAAA	-22	NA	108141184	108082062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108086861_108095211_108095610_108140978
ES.36137.9	chr9	-	4360	8	NNC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	-4	-230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	216.089833926843	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCTCTGACTGTCTA	NA	False	NA	67	True	AATAAA	-22	NA	108141161	108082062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108082344_108082909_108083127_108083173_108083600_108083818_108084399_108084642_108086861_108095211_108095610_108130299_108130357_108140978
ES.36138.1	chr9	-	167	1	Intergenic	novelGene_29390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTAAAAAAAGACTCT	1021	False	NA	0	True	NA	NA	NA	108160463	108160296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108160300_108160500
ES.36139.1	chr9	-	294	1	Intergenic	novelGene_29391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTGCTTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	108165189	108164895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108164900_108165200
ES.3614.1	chr10	-	177	1	Intergenic	novelGene_2758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	94020621	94020444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94020400_94020600
ES.36140.1	chr9	-	5343	2	NIC	ENSMUSG00000039461.13	novel	1668	3	NA	NA	16	3794	intron_retention	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAGTGTCTATGATCA	7301	False	NA	NA	False	NA	NA	NA	108183173	108176362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108181453_108182920
ES.36140.2	chr9	-	210	1	Antisense	novelGene_ENSMUSG00000032607.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGGCCCTAAAATTGGA	NA	False	NA	NA	False	NA	NA	NA	108179101	108178891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_108178900_108179100
ES.36140.3	chr9	-	173	1	Intergenic	novelGene_29392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGACACCC	NA	False	NA	NA	False	NA	NA	NA	108179736	108179563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108179600_108179700
ES.36140.4	chr9	-	1791	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	4	-701	4	5	multi-exon	TRUE	canonical	3	19	junction_2	5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGGTTATTCAATCAAG	7119	False	NA	3	True	ATTAAA	-18	NA	108183355	108180151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108181453_108182524_108182580_108182920
ES.36140.5	chr9	-	1281	1	NIC	ENSMUSG00000039461.13	novel	1668	3	NA	NA	-3	-781	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAATAGATAAAACAAGA	7324	False	NA	NA	False	NA	NA	NA	108183150	108181869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108181900_108183200
ES.36141.1	chr9	-	1869	1	Intergenic	novelGene_29393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTGGCAAGATGACAAG	NA	False	NA	NA	False	NA	NA	NA	108195560	108193691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108193700_108195600
ES.36142.1	chr9	-	1834	4	Antisense	novelGene_ENSMUSG00000102554.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCAGCACGATGACTTA	NA	False	NA	NA	False	NA	NA	NA	108212565	108203362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_108203726_108203906_108204939_108208067_108208189_108212247
ES.36142.2	chr9	-	187	1	Intergenic	novelGene_29396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACCAAAAACCAAAAC	5118	False	NA	NA	False	NA	NA	NA	108204402	108204215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108204200_108204400
ES.36143.1	chr9	+	3677	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	-28	13	-28	12	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGTGGCATTGTTTC	NA	False	NA	51	True	CATAAA	-8	NA	108225023	108269731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.10	chr9	+	3281	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	156.074429359841	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTCCTCTAGTTCTTT	NA	False	NA	17	True	AGTAAA	-21	NA	108225049	108269465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
ES.36143.101	chr9	+	5705	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-1	0	intron_retention	FALSE	canonical	3	106	junction_6	29.9492807471845	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9091	False	NA	19	True	AATAAA	-16	NA	108357054	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.102	chr9	+	5708	32	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	-1	0	-1	0	intron_retention	FALSE	canonical	3	106	junction_6	27.8780233004881	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9091	False	NA	19	True	AATAAA	-16	NA	108357054	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.103	chr9	+	7062	27	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-1	0	intron_retention	FALSE	canonical	3	106	junction_5	31.1615612479266	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9091	False	NA	19	True	AATAAA	-16	NA	108357054	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.104	chr9	+	5563	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	39.6159295612257	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9098	False	NA	19	True	AATAAA	-16	NA	108357061	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357114_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.105	chr9	+	5584	33	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	39.0793338727453	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9103	False	NA	16	True	AATAAA	-13	NA	108357066	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365434_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.106	chr9	+	5215	32	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	40.6335108750817	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9103	False	NA	18	True	AATAAA	-15	NA	108357066	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365673_108366445_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.108	chr9	+	3952	25	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	11	2638	-4	-779	5prime_fragment	FALSE	canonical	3	106	junction_6	16.5528929160098	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCGAGAGATCTGGACTG	9103	False	NA	NA	False	AATAAA	-23	NA	108357066	108365091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674
ES.36143.109	chr9	+	6797	30	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-4	0	intron_retention	FALSE	canonical	3	32	junction_1	37.9797805898141	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9103	False	NA	19	True	AATAAA	-16	NA	108357066	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.11	chr9	+	3530	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	9	6	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	156.074429359841	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	45	True	CATAAA	-2	NA	108225060	108269725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
ES.36143.110	chr9	+	5691	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	0	-2	intron_retention	FALSE	canonical	3	106	junction_6	30.137285600244	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTGTCTGGCCTT	9107	False	NA	17	True	AATAAA	-14	NA	108357070	108367727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.113	chr9	+	5761	31	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	-3	intron_retention	FALSE	canonical	3	106	junction_5	29.6877078940089	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9118	False	NA	16	True	AATAAA	-13	NA	108357081	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.115	chr9	+	6435	28	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	0	intron_retention	FALSE	canonical	3	32	junction_1	38.7496271941003	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9118	False	NA	19	True	AATAAA	-16	NA	108357081	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.116	chr9	+	5965	31	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	-3	intron_retention	FALSE	canonical	3	32	junction_1	36.8184736239839	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9118	False	NA	16	True	AATAAA	-13	NA	108357081	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.117	chr9	+	5893	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	-2	intron_retention	FALSE	canonical	3	106	junction_6	29.9277311985561	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTGTCTGGCCTT	9118	False	NA	17	True	AATAAA	-14	NA	108357081	108367727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.118	chr9	+	5705	31	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	2	intron_retention	FALSE	canonical	1	4	junction_1	40.0094433297385	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTCTGGCCTTTGAT	9118	False	NA	21	True	AATAAA	-18	NA	108357081	108367731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357114_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.12	chr9	+	5919	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-10	-29	intron_retention	FALSE	canonical	3	580	junction_17	48.9659840095928	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGCTCTCCCTTAAAAGA	NA	False	NA	10	True	GATAAA	-22	NA	108225062	108269690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.121	chr9	+	5516	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	40.5929516187703	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9118	False	NA	18	True	AATAAA	-15	NA	108357081	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.122	chr9	+	5972	31	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2	-1	intron_retention	FALSE	canonical	3	106	junction_6	28.0457760733333	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9118	False	NA	18	True	AATAAA	-15	NA	108357081	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.123	chr9	+	5648	33	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	38.3635849268222	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9119	False	NA	16	True	AATAAA	-13	NA	108357082	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366926_108367153_108367244_108367405_108367482
ES.36143.126	chr9	+	5592	33	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.0866249514723	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9121	False	NA	18	True	AATAAA	-15	NA	108357084	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357263_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.127	chr9	+	5498	32	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.2043031696763	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9121	False	NA	16	True	AATAAA	-13	NA	108357084	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362403_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365651_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.128	chr9	+	5543	33	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	40.1132065028153	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9121	False	NA	16	True	AATAAA	-13	NA	108357084	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364728_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.129	chr9	+	6290	27	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	5	-2	intron_retention	FALSE	canonical	3	106	junction_6	28.8899411253269	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTGTCTGGCCTT	9121	False	NA	17	True	AATAAA	-14	NA	108357084	108367727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366794_108366975_108367153_108367244
ES.36143.131	chr9	+	5971	31	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	5	0	intron_retention	FALSE	canonical	3	106	junction_6	30.415566190138	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9121	False	NA	19	True	AATAAA	-16	NA	108357084	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.133	chr9	+	5918	32	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	10	2	intron_retention	FALSE	canonical	0	0	junction_18	46.7305914683329	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTCTGGCCTTTGAT	9126	False	NA	21	True	AATAAA	-18	NA	108357089	108367731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362934_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367484
ES.36143.134	chr9	+	5574	33	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	44.2042379013314	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9126	False	NA	19	True	AATAAA	-16	NA	108357089	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367260_108367405_108367482
ES.36143.136	chr9	+	5713	32	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	12	-1	intron_retention	FALSE	canonical	0	0	junction_28	43.7444332715336	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	9128	False	NA	18	True	AATAAA	-15	NA	108357091	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366122_108366365_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.139	chr9	+	5601	31	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	178	-3	intron_retention	FALSE	canonical	0	0	junction_15	40.6916453341469	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	9294	False	NA	16	True	AATAAA	-13	NA	108357257	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361589_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.14	chr9	+	3327	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	156.268839227079	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225066	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243993_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.140	chr9	+	5182	28	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	1236	1	1212	-1	3prime_fragment	FALSE	canonical	3	106	junction_1	30.5884671238631	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	NA	False	NA	18	True	AATAAA	-15	NA	108358291	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.141	chr9	+	4852	27	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	1645	3	1621	-3	3prime_fragment	FALSE	canonical	3	113	junction_1	29.2597022800095	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	NA	False	NA	16	True	AATAAA	-13	NA	108358700	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.142	chr9	+	4331	24	NNC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	2691	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.8504504398839	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	NA	False	NA	18	True	AATAAA	-15	NA	108359770	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108359827_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.143	chr9	+	4719	20	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	3006	0	intron_retention	FALSE	canonical	3	133	junction_1	27.4820515590583	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	NA	False	NA	19	True	AATAAA	-16	NA	108360085	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.144	chr9	+	4441	20	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	3311	-1	intron_retention	FALSE	canonical	3	135	junction_5	29.1114964297051	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	NA	False	NA	18	True	AATAAA	-15	NA	108360390	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.145	chr9	+	4006	19	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	3803	3	3779	-3	intron_retention	FALSE	canonical	3	135	junction_3	26.6587951345272	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	NA	False	NA	16	True	AATAAA	-13	NA	108360858	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.146	chr9	+	3941	19	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	3983	0	3959	0	3prime_fragment	FALSE	canonical	3	135	junction_2	27.7833883222811	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	NA	False	NA	19	True	AATAAA	-16	NA	108361038	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.147	chr9	+	4432	15	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-3797	-1	intron_retention	FALSE	canonical	3	135	junction_2	28.416813792585	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	NA	False	NA	18	True	AATAAA	-15	NA	108361219	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365331_108365403_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.148	chr9	+	3357	16	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	5640	0	-2321	0	3prime_fragment	FALSE	canonical	3	142	junction_1	25.6546292118986	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	NA	False	NA	19	True	AATAAA	-16	NA	108362695	108367729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.149	chr9	+	3917	11	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-2155	-3	intron_retention	FALSE	canonical	3	148	junction_2	25.0936246883546	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	NA	False	NA	16	True	AATAAA	-13	NA	108362861	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.15	chr9	+	3769	18	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	586	junction_10	69.1784213410421	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108225071	108263101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261715_108262005
ES.36143.150	chr9	+	3248	11	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	-1490	-3	intron_retention	FALSE	canonical	3	148	junction_1	24.9136508765777	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGTGTTGTCTGGCCT	NA	False	NA	16	True	AATAAA	-13	NA	108363526	108367726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244
ES.36143.151	chr9	+	2181	10	ISM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	7434	1	-527	-1	3prime_fragment	FALSE	canonical	3	152	junction_4	22.5476176508383	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTCTGGCCTTT	NA	False	NA	18	True	AATAAA	-15	NA	108364489	108367728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36143.152	chr9	+	4825	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-201	-112	53	92	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTCTTGGTTATTGT	NA	False	NA	123	True	ATTAAA	-40	NA	108367853	108379628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.153	chr9	+	4682	27	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	71	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	83.0978250058933	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGTGACTGATCCACA	NA	False	NA	10	True	AATAAA	-14	NA	108367871	108379515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.154	chr9	+	2317	14	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-182	6131	72	-277	5prime_fragment	FALSE	canonical	3	222	junction_10	32.6860627519567	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACACAGAGACTGTGGA	NA	False	NA	NA	False	AAAACA	-3	NA	108367872	108373385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268
ES.36143.155	chr9	+	4699	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-164	-18	79	-2	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTATGGCTCCCTCC	NA	False	NA	29	True	AATAAA	-33	NA	108367879	108379534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.156	chr9	+	4706	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	88	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	61.820028925352	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367888	108378898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.158	chr9	+	4781	26	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	100	-2	intron_retention	FALSE	canonical	3	4	junction_8	72.8523548006514	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367900	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371887_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.159	chr9	+	4687	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	69.5979153601974	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367901	108378898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.16	chr9	+	4917	21	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_16	160.129720851565	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225079	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261528_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.163	chr9	+	4969	25	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	103	0	intron_retention	FALSE	canonical	3	70	junction_24	63.8826914264646	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108367903	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.166	chr9	+	4504	27	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	104	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	73.4425368095203	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367904	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.167	chr9	+	4785	26	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	105	0	intron_retention	FALSE	canonical	3	46	junction_5	79.5052098921825	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108367905	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.168	chr9	+	4650	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	108	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	72.1456449332892	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367908	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371571_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.169	chr9	+	4532	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	108	-2	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	79.495078184887	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCTTGTCTCTCTGTCT	NA	False	NA	13	True	AATAAA	-15	NA	108367908	108378894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.17	chr9	+	6232	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	-1	intron_retention	FALSE	canonical	3	580	junction_19	66.7296598223009	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTCTCCACGTTAGCT	NA	False	NA	63	True	CATAAA	-20	NA	108225079	108269743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108268268_108268877
ES.36143.170	chr9	+	2492	7	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-134	6854	109	3	intron_retention	FALSE	canonical	3	229	junction_1	28.1153378464891	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCTGGGATGGCACGA	NA	False	NA	NA	False	NA	NA	NA	108367909	108372662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214
ES.36143.171	chr9	+	6230	26	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-145	-3	109	3	intron_retention	FALSE	canonical	3	222	junction_10	42.1705869060415	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACTGATCCACAACAT	NA	False	NA	14	True	AATAAA	-18	NA	108367909	108379519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.172	chr9	+	4660	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-138	-10	116	-10	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAACATGTTATGG	NA	False	NA	21	True	AATAAA	-25	NA	108367916	108379526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.173	chr9	+	4654	27	NNC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	118	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	98.9360037612026	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAATCTTGTCTCTCTGT	NA	False	NA	11	True	AATAAA	-13	NA	108367918	108378892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375784_108375890_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.175	chr9	+	4653	27	NNC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-119	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	78.8264515721444	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTATGGCTCCCTCC	NA	False	NA	29	True	AATAAA	-33	NA	108367919	108379534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371571_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.177	chr9	+	4733	26	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-119	6	intron_retention	FALSE	canonical	3	118	junction_10	53.9779806958356	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGATCCACAACATGTT	NA	False	NA	17	True	AATAAA	-21	NA	108367919	108379522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.178	chr9	+	6179	25	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-119	1	intron_retention	FALSE	canonical	3	4	junction_8	96.0424439592552	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108367919	108379517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371723_108371825_108371887_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.179	chr9	+	4642	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-116	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.5983071278811	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108367922	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370523_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377206_108377289_108377469_108379038
ES.36143.180	chr9	+	4655	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-116	-4	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	84.0228554423521	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAATCTTGTCTCTCTGT	NA	False	NA	11	True	AATAAA	-13	NA	108367922	108378892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371887_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.183	chr9	+	4769	26	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-113	-3	intron_retention	FALSE	canonical	3	4	junction_8	79.7649145928208	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATGTTATGGCTCCCTC	NA	False	NA	28	True	AATAAA	-32	NA	108367925	108379533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371887_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.184	chr9	+	4967	25	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-113	-2	intron_retention	FALSE	canonical	3	222	junction_9	42.278815781534	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367925	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.185	chr9	+	5005	24	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-109	3	intron_retention	FALSE	canonical	3	222	junction_7	41.7554768715586	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACTGATCCACAACAT	NA	False	NA	14	True	AATAAA	-18	NA	108367929	108379519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370759_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.187	chr9	+	4736	26	NNC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-109	6	intron_retention	FALSE	canonical	3	10	junction_24	78.7765041113148	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGATCCACAACATGTT	NA	False	NA	17	True	AATAAA	-21	NA	108367929	108379522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377206_108377289_108377469_108379038
ES.36143.188	chr9	+	9040	14	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-109	-2	intron_retention	FALSE	canonical	3	242	junction_2	36.8669445117593	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTATGGCTCCCTCC	NA	False	NA	29	True	AATAAA	-33	NA	108367929	108379534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108369930_108370166_108370683_108370759_108371063_108371214_108371898_108372010_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374367_108375094_108375779_108375878_108376710_108376790_108377210_108377289
ES.36143.189	chr9	+	5281	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-109	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	61.820028925352	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367929	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.190	chr9	+	4500	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-104	1	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	94.0713014862323	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108367934	108378897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.191	chr9	+	4916	25	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-104	-10	intron_retention	FALSE	canonical	3	118	junction_8	54.4351678604925	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAACATGTTATGG	NA	False	NA	21	True	AATAAA	-25	NA	108367934	108379526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.192	chr9	+	6194	26	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	-109	2	-104	-2	intron_retention	FALSE	canonical	3	118	junction_10	54.0111099682278	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367934	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.193	chr9	+	4752	26	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-104	-2	intron_retention	FALSE	canonical	3	118	junction_9	53.5213452745725	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367934	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.194	chr9	+	4606	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-104	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	72.2194735986348	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367934	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376169_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.196	chr9	+	4935	24	NNC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-103	-2	intron_retention	FALSE	canonical	1	2	junction_12	82.8447656674078	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108367935	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373572_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.199	chr9	+	4617	27	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-99	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_9	71.7001997141797	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108367939	108379517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371887_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.2	chr9	+	3564	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	-26	124	-26	-99	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGACTCCTAGAAGTT	NA	False	NA	-60	True	AATGAA	-29	NA	108225025	108269620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.20	chr9	+	4842	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-8	0	intron_retention	FALSE	canonical	3	580	junction_18	64.8916597106284	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225087	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.200	chr9	+	6371	24	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-89	4	intron_retention	FALSE	canonical	3	118	junction_9	55.6027973892027	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTGATCCACAACATG	NA	False	NA	15	True	AATAAA	-19	NA	108367949	108379520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.201	chr9	+	4697	26	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-88	2	intron_retention	FALSE	canonical	3	118	junction_9	53.4919208853075	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGACTGATCCACAACA	NA	False	NA	13	True	AATAAA	-17	NA	108367950	108379518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.202	chr9	+	4471	27	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-82	-9	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	66.1673175013574	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACAACATGTTATGGC	NA	False	NA	22	True	AATAAA	-26	NA	108367956	108379527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.204	chr9	+	7451	14	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	222	junction_7	41.6420361125346	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATCTTGTCTCTCTGTC	NA	False	NA	12	True	AATAAA	-14	NA	108368029	108378893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108376405_108376492
ES.36143.205	chr9	+	4252	25	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-7	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	74.2369400223965	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108368031	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.207	chr9	+	4382	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-1	-78	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	71.7179716362733	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTAATTTTTTGCA	NA	False	NA	-67	True	NA	NA	NA	108368037	108379438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373572_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.209	chr9	+	7307	12	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	1	0	intron_retention	FALSE	canonical	3	4	junction_6	94.2137537993189	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108368039	108378898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370759_108371723_108371825_108371887_108372010_108372454_108372735_108372932_108373009_108373144_108373268_108374367_108375094_108376405_108376492
ES.36143.21	chr9	+	4083	20	ISM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	36	2752	-8	-1999	5prime_fragment	FALSE	canonical	3	580	junction_19	68.4053828210322	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAAGTCTGAGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	108225087	108266992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475
ES.36143.210	chr9	+	4464	27	NNC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.8275366000287	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGACTGATCCACAACAT	NA	False	NA	14	True	AATAAA	-18	NA	108368039	108379519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372298_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.211	chr9	+	4601	26	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	0	-7	intron_retention	FALSE	canonical	3	222	junction_9	41.3951494743044	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGACTTAGTGACTGA	NA	False	NA	4	True	AATAAA	-8	NA	108368043	108379509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.213	chr9	+	4622	26	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	0	-4	intron_retention	FALSE	canonical	3	222	junction_9	42.0402473827165	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTTAGTGACTGATCC	NA	False	NA	7	True	AATAAA	-11	NA	108368043	108379512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.215	chr9	+	4739	25	NNC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	1	-23	intron_retention	FALSE	non_canonical	0	0	junction_4	74.0813062152359	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108368044	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370683_108370756_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.216	chr9	+	4450	26	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	73.7267821079966	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTGACTGATCCACAA	NA	False	NA	11	True	AATAAA	-15	NA	108368044	108379516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.218	chr9	+	4457	27	NNC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	78.3095813585054	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAACATGTTATGGCTCC	NA	False	NA	25	True	AATAAA	-29	NA	108368048	108379530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373572_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.219	chr9	+	4421	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	70.778636498702	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108368050	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375971_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.22	chr9	+	4355	8	ISM	ENSMUSG00000032612.15	ENSMUST00000194224.6	3457	18	15	15653	-8	8	intron_retention	FALSE	canonical	3	609	junction_7	60.2978999194323	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCCTAGGCGTTAGGGT	NA	False	NA	NA	False	NA	NA	NA	108225087	108247449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959
ES.36143.220	chr9	+	5645	24	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	7	620	-4	0	intron_retention	FALSE	canonical	3	118	junction_10	55.126285675717	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108368050	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790
ES.36143.221	chr9	+	4728	26	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	118	junction_10	54.016975109682	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTTATGGCTCCCTCC	NA	False	NA	29	True	AATAAA	-33	NA	108368050	108379534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.222	chr9	+	5467	26	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	-4	619	-4	1	5prime_fragment	FALSE	canonical	3	222	junction_10	42.1705869060415	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTCTCTCTGTCTAAA	NA	False	NA	16	True	AATAAA	-18	NA	108368050	108378897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.223	chr9	+	4520	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	97.7581319730686	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATCTTGTCTCTCTGTCT	NA	False	NA	13	True	AATAAA	-15	NA	108368052	108378894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.225	chr9	+	4668	26	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-2	0	intron_retention	FALSE	canonical	3	70	junction_25	62.689022962557	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108368052	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.226	chr9	+	4662	26	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	-2	0	intron_retention	FALSE	canonical	3	222	junction_9	41.437181371324	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGGCTCCCTCCCC	NA	False	NA	31	True	AATAAA	-35	NA	108368052	108379536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.227	chr9	+	4790	25	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	0	-2	intron_retention	FALSE	canonical	3	222	junction_8	41.9433314789795	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108368054	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.228	chr9	+	4620	26	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	1	8	intron_retention	FALSE	canonical	3	222	junction_10	42.1947864078016	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATCCACAACATGTTAT	NA	False	NA	19	True	AATAAA	-23	NA	108368055	108379524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.229	chr9	+	4383	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	85.2440284049166	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108368055	108378898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.230	chr9	+	4891	24	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	3	-1	intron_retention	FALSE	canonical	3	222	junction_7	42.5110238121555	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGTGACTGATCCACA	NA	False	NA	10	True	AATAAA	-14	NA	108368057	108379515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.232	chr9	+	4485	27	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	88.5751444425452	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108368061	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.233	chr9	+	4963	27	NNC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	43	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.1089255293654	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTGACTGATCCACAAC	NA	False	NA	12	True	AATAAA	-16	NA	108368097	108379517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368588_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.234	chr9	+	4473	27	NNC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	243	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.1089255293654	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108368297	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108368322_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.235	chr9	+	4472	27	NNC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	-368	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	93.2794681138225	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108369523	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108369562_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.236	chr9	+	4471	26	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	1614	2	-223	-2	3prime_fragment	FALSE	canonical	3	222	junction_9	39.0672445918573	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGTGACTGATCCAC	NA	False	NA	9	True	AATAAA	-13	NA	108369668	108379514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.237	chr9	+	4498	26	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	-223	-1	combination_of_known_junctions	FALSE	canonical	3	70	junction_25	61.369699363774	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTGTCTCTCTGTCTA	NA	False	NA	14	True	AATAAA	-16	NA	108369668	108378895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ES.36143.238	chr9	+	4151	24	ISM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	2290	23	-332	-23	3prime_fragment	FALSE	canonical	3	118	junction_7	53.6320870015671	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108370333	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.239	chr9	+	4419	21	NNC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	-295	-28	intron_retention	FALSE	non_canonical	0	0	junction_17	126.336643536228	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAAAAATAAATAATAA	NA	False	NA	-17	True	TTTAAA	-4	NA	108370370	108379488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108370683_108370762_108371063_108371214_108371723_108371825_108371887_108372010_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376713_108376790_108376944_108377048_108377206_108377289_108377469_108379038
ES.36143.24	chr9	+	3343	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	36	283	-8	3	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225087	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.241	chr9	+	4072	19	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	351	-1	intron_retention	FALSE	canonical	3	222	junction_4	38.1550200570719	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGTGACTGATCCACA	NA	False	NA	10	True	AATAAA	-14	NA	108371016	108379515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108371063_108371214_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.242	chr9	+	3091	20	NNC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	360	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	102.009912070665	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCCACAACATGTTATGG	NA	False	NA	21	True	AATAAA	-25	NA	108371025	108379526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376693_108379056_108379139_108379179
ES.36143.243	chr9	+	6678	7	NIC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	-50	0	intron_retention	FALSE	canonical	3	310	junction_3	27.2682151149567	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108371488	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108376405_108376492_108376710_108376790
ES.36143.244	chr9	+	5734	11	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	53	-23	intron_retention	FALSE	canonical	3	4	junction_1	103.570072897532	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108371620	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108371887_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108376710_108376790
ES.36143.245	chr9	+	4369	18	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	70	0	intron_retention	FALSE	canonical	3	222	junction_3	37.4530848397544	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	NA	False	NA	15	True	AATAAA	-17	NA	108371637	108378896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.246	chr9	+	3141	18	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	3953	23	179	-23	3prime_fragment	FALSE	canonical	3	222	junction_1	35.4766846775364	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	NA	False	NA	-12	True	AATATA	-5	NA	108372007	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.247	chr9	+	5485	1	FSM	ENSMUSG00000006676.17	ENSMUST00000193975.2	1548	1	-3935	-2	-132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	545	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108373413	108378898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108373400_108378900
ES.36143.248	chr9	+	1990	10	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	7038	23	805	-23	3prime_fragment	FALSE	canonical	3	293	junction_9	29.1335791158375	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	726	False	NA	-12	True	AATATA	-5	NA	108375092	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ES.36143.249	chr9	+	3504	6	NIC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	-366	-23	intron_retention	FALSE	canonical	3	329	junction_5	19.6224361382577	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	1169	False	NA	-12	True	AATATA	-5	NA	108375535	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108375779_108375878_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289
ES.36143.25	chr9	+	2524	17	NNC	ENSMUSG00000032612.15	novel	3457	18	NA	NA	-7	-2896	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	176.378322080691	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAGATTCTA	NA	False	NA	NA	False	NA	NA	NA	108225088	108260206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108259907
ES.36143.250	chr9	+	1515	2	NNC	ENSMUSG00000006676.17	novel	3252	19	NA	NA	537	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAATAAATAAG	3519	False	NA	-12	True	AATATA	-5	NA	108377885	108379493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108379147_108379239
ES.36143.251	chr9	+	2484	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	318	-2	-32	2	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGTTGTCTGCCTTT	NA	False	NA	20	True	AATAAA	-23	NA	108385222	108393142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.254	chr9	+	2382	23	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	350	631	0	115	5prime_fragment	FALSE	canonical	3	468	junction_2	35.3225105572369	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTAGCATTCTCCAAA	NA	False	NA	NA	False	GATAAA	-14	NA	108385254	108392509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305
ES.36143.255	chr9	+	4246	17	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	474	junction_1	38.2078505512938	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385255	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108388410_108388529_108388616_108388730_108388818_108389681_108389978_108390058_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
ES.36143.257	chr9	+	2462	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_15	116.469137188164	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	108385256	108393136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390922_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
ES.36143.258	chr9	+	3614	17	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	473	junction_5	43.1623027073394	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385256	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108390168_108390264_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.259	chr9	+	4348	14	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	473	junction_4	42.3304833717406	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385256	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108386186_108386347_108386424_108386639_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108391006_108391091_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
ES.36143.26	chr9	+	3129	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	37	496	-7	-196	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACCTGTGGAGCTCA	NA	False	NA	NA	False	TTTAAA	-12	NA	108225088	108269248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.260	chr9	+	2423	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	114.111857701349	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392324_108392432_108392994
ES.36143.261	chr9	+	3078	20	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	1	intron_retention	FALSE	canonical	3	468	junction_1	38.9899482749336	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	108385257	108393136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
ES.36143.262	chr9	+	2512	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.070012385819	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108385257	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388265_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.263	chr9	+	2463	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	115.284459560936	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	108385257	108393136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388509_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.265	chr9	+	4322	20	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	-1	0	intron_retention	FALSE	canonical	3	473	junction_5	40.666674235199	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCTCTGGCGTCTCTC	NA	False	NA	6	True	AATAAA	-9	NA	108385262	108393128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108386186_108386347_108386424_108386639_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392233_108392305_108392432_108392994
ES.36143.266	chr9	+	2527	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	-1	intron_retention	FALSE	canonical	3	468	junction_2	40.6858555640066	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108385263	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392233_108392305_108392432_108392994
ES.36143.267	chr9	+	2380	24	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	115.117889767071	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385264	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390922_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.268	chr9	+	2449	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	115.309380833168	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108385270	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390600_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.269	chr9	+	3650	18	NIC	ENSMUSG00000032604.17	novel	3066	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	468	junction_2	36.8613787815206	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385270	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108390396_108390484_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165
ES.36143.27	chr9	+	3621	22	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	154.349913157118	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	45	True	CATAAA	-2	NA	108225088	108269725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261580_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.270	chr9	+	3056	22	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_14	120.261977826151	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385270	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390922_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392233_108392305_108392432_108392994
ES.36143.271	chr9	+	2588	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	4	0	intron_retention	FALSE	canonical	3	468	junction_2	40.0742338027321	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385273	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385399_108385581_108385730_108386075_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.272	chr9	+	2501	24	NNC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.717586985192	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108385276	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386267_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.273	chr9	+	4464	12	NIC	ENSMUSG00000032604.17	novel	3066	22	NA	NA	3	0	intron_retention	FALSE	canonical	3	468	junction_1	38.6640542482173	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385649	108393135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108385730_108386075_108386424_108386639_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165
ES.36143.274	chr9	+	1763	17	NNC	ENSMUSG00000032604.17	novel	2150	20	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	182.137128542618	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108388349	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108388410_108388529_108388618_108388738_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391267_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.275	chr9	+	4138	4	ISM	ENSMUSG00000032604.17	ENSMUST00000194045.7	760	7	-2607	2	-92	-1	intron_retention	FALSE	canonical	3	536	junction_2	23.8374122383748	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCGTCTCTCTGTTG	NA	False	NA	11	True	AATAAA	-14	NA	108388656	108393133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108391408_108391488_108391594_108391741_108391835_108391944
ES.36143.276	chr9	+	1632	15	ISM	ENSMUSG00000032604.17	ENSMUST00000207062.2	2150	20	2051	-1	-20	1	3prime_fragment	FALSE	canonical	3	501	junction_5	37.2490925790036	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTCTCTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-17	NA	108388728	108393136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.277	chr9	+	1258	11	ISM	ENSMUSG00000032604.17	ENSMUST00000207062.2	2150	20	3585	-2	-42	2	3prime_fragment	FALSE	canonical	3	501	junction_1	38.3026108770668	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTCTCTCTGTTGTCTG	NA	False	NA	15	True	AATAAA	-18	NA	108390262	108393137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ES.36143.278	chr9	+	1159	11	NNC	ENSMUSG00000032604.17	novel	2150	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	167.073157628627	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCTCTGGCGTCTCTC	NA	False	NA	6	True	AATAAA	-9	NA	108390318	108393128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108393028
ES.36143.279	chr9	+	3546	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-15	4	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	851	False	NA	68	True	NA	NA	NA	108393989	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.28	chr9	+	6287	22	FSM	ENSMUSG00000032611.10_ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	37	-2662	-7	-2563	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGAAGTTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	108225088	108272406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.280	chr9	+	3186	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	57	-2	multi-exon	FALSE	canonical	2	3	junction_1	207.047498576212	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTACTGGAGAACGTG	923	False	NA	62	True	NA	NA	NA	108394061	108437360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108394170_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.281	chr9	+	3223	10	NNC	ENSMUSG00000006673.15	novel	2291	6	NA	NA	-124	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.973823139142	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTACTGGAGAACGTGT	1023	False	NA	63	True	NA	NA	NA	108394161	108437361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394306_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.282	chr9	+	3333	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-118	-175	-95	4	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1052	False	NA	68	True	NA	NA	NA	108394190	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.283	chr9	+	3103	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-64	1	-41	-1	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCGCTTTTTTTTTTT	1106	False	NA	3	True	AGTAAA	-7	NA	108394244	108437190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.284	chr9	+	3662	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-13	5	intron_retention	FALSE	canonical	3	113	junction_1	182.811378201686	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGAACGTGTCTTTAT	1134	False	NA	69	True	NA	NA	NA	108394272	108437367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108434248_108436444
ES.36143.285	chr9	+	3311	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	234.862853597584	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGAACGTGTCTTTAT	1147	False	NA	69	True	NA	NA	NA	108394285	108437367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.286	chr9	+	2206	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	220.716305469261	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1147	False	NA	68	True	NA	NA	NA	108394285	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394440_108405787_108406118_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.287	chr9	+	4099	9	ISM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-23	1161	0	-568	5prime_fragment	FALSE	canonical	3	392	junction_1	83.5535008243221	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTCCTCAGCTATT	1147	False	NA	NA	False	AATAAA	-17	NA	108394285	108436030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156
ES.36143.288	chr9	+	3032	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	252.344610541093	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1147	False	NA	66	True	NA	NA	NA	108394285	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108405787_108406118_108410785_108411602_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.289	chr9	+	3380	12	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	285.374337312755	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1147	False	NA	66	True	NA	NA	NA	108394285	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108395965_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.290	chr9	+	2956	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-23	107	0	-107	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATGGAAGAAGAATAAGG	1147	False	NA	NA	False	CATAAA	-10	NA	108394285	108437084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.291	chr9	+	4128	8	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	23	junction_6	231.788344691216	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1147	False	NA	61	True	NA	NA	NA	108394285	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419786_108422061_108422177_108433160_108433759_108434162_108434248_108436444
ES.36143.292	chr9	+	3492	9	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	103	junction_4	196.029812783668	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1147	False	NA	61	True	NA	NA	NA	108394285	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108418989_108419630_108419786_108422061_108422177_108433160_108433759_108434156_108434248_108436444
ES.36143.293	chr9	+	3297	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	232.186649056314	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGAGAACGTGTCTTT	1147	False	NA	67	True	NA	NA	NA	108394285	108437365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.294	chr9	+	3360	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	252.557003466544	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1151	False	NA	66	True	NA	NA	NA	108394289	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.295	chr9	+	3349	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	284.792836988573	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1151	False	NA	61	True	NA	NA	NA	108394289	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434162_108434248_108436444
ES.36143.296	chr9	+	3793	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	-3	intron_retention	FALSE	canonical	3	392	junction_1	94.856141076896	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1151	False	NA	61	True	NA	NA	NA	108394289	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.297	chr9	+	3374	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	277.400522710394	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1151	False	NA	68	True	NA	NA	NA	108394289	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.298	chr9	+	3579	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	113	junction_1	182.656097626113	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1151	False	NA	64	True	NA	NA	NA	108394289	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433759_108434156_108434248_108436444
ES.36143.299	chr9	+	3366	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	236.660600861233	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1151	False	NA	64	True	NA	NA	NA	108394289	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.30	chr9	+	2994	21	FSM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	-22	464	-6	-189	multi-exon	FALSE	canonical	3	4	junction_6	159.685973084676	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGAGCTCAATTGTGG	NA	False	NA	NA	False	TTTAAA	-19	NA	108225089	108269255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.301	chr9	+	3899	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	253.754211787706	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGAGAACGTGTCTTT	1153	False	NA	67	True	NA	NA	NA	108394291	108437365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434380_108434903_108435440_108436444
ES.36143.302	chr9	+	3351	11	FSM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	-18	-2	-7	2	multi-exon	FALSE	canonical	3	8	junction_1	235.086983901704	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1156	False	NA	66	True	NA	NA	NA	108394294	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108394440_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.303	chr9	+	3205	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	281.286615394334	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1159	False	NA	66	True	NA	NA	NA	108394297	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108395965_108396026_108405787_108406123_108410881_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.304	chr9	+	3260	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	286.16060176062	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1159	False	NA	66	True	NA	NA	NA	108394297	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108405787_108406118_108406741_108406766_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.305	chr9	+	3209	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.973823139142	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1162	False	NA	61	True	NA	NA	NA	108394300	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405794_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.306	chr9	+	3404	12	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	292.210017307545	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1162	False	NA	61	True	NA	NA	NA	108394300	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108395965_108396026_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.307	chr9	+	3552	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	392	junction_1	94.9992598655379	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1163	False	NA	61	True	NA	NA	NA	108394301	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433759_108434156_108434248_108436444
ES.36143.308	chr9	+	3234	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	212.608897297071	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433144_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.309	chr9	+	2197	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	260.545311558278	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1164	False	NA	64	True	NA	NA	NA	108394302	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108405787_108406118_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.31	chr9	+	3320	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	156.762063877718	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225091	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261299_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.310	chr9	+	2695	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	-6	351	1	73	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGTGTCCTAGGAAGT	1164	False	NA	NA	False	CATAAA	-42	NA	108394302	108436840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.311	chr9	+	3143	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_4	186.773051695115	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1164	False	NA	66	True	NA	NA	NA	108394302	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108418989_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.312	chr9	+	3303	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	259.715632952658	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1164	False	NA	66	True	NA	NA	NA	108394302	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394440_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.313	chr9	+	3174	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	250.922298730105	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1165	False	NA	61	True	NA	NA	NA	108394303	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419760_108422086_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.314	chr9	+	3374	12	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	287.132244131227	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1165	False	NA	66	True	NA	NA	NA	108394303	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108395965_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.315	chr9	+	3474	12	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	311.217683111021	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACAAGCTACTGGAGAA	1168	False	NA	58	True	NA	NA	NA	108394306	108437356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108395901_108396026_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433762_108434156_108434248_108436444
ES.36143.316	chr9	+	3240	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	253.696669272578	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1169	False	NA	66	True	NA	NA	NA	108394307	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419616_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.317	chr9	+	4517	7	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	5	2	intron_retention	FALSE	canonical	3	113	junction_1	209.359671909903	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1179	False	NA	66	True	NA	NA	NA	108394317	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419786_108422061_108422177_108433160_108434248_108436444
ES.36143.318	chr9	+	3295	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	259.715632952658	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1184	False	NA	66	True	NA	NA	NA	108394322	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108394452_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.319	chr9	+	4440	10	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	357	-4	-128	4	3prime_fragment	FALSE	canonical	3	141	junction_1	164.63899902514	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1531	False	NA	68	True	NA	NA	NA	108394669	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.32	chr9	+	3197	21	FSM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	-19	258	-3	3	multi-exon	FALSE	canonical	3	4	junction_6	159.685973084676	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225092	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.320	chr9	+	3577	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	-55	4	multi-exon	FALSE	canonical	3	61	junction_1	223.453440340488	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1604	False	NA	68	True	NA	NA	NA	108394742	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.321	chr9	+	3666	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	-18	2	multi-exon	FALSE	canonical	3	19	junction_4	287.231728950167	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1641	False	NA	66	True	NA	NA	NA	108394779	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.322	chr9	+	3757	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	-8	2	multi-exon	FALSE	canonical	0	0	junction_1	236.88606966219	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1651	False	NA	66	True	NA	NA	NA	108394789	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395405_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.323	chr9	+	3581	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	-4	2	multi-exon	FALSE	canonical	0	0	junction_1	236.88606966219	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1655	False	NA	66	True	NA	NA	NA	108394793	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395908_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.324	chr9	+	4397	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	-2	3	intron_retention	FALSE	canonical	3	8	junction_1	258.316937114081	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGAGAACGTGTCTTT	1657	False	NA	67	True	NA	NA	NA	108394795	108437365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.325	chr9	+	3464	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	-2	4	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1657	False	NA	68	True	NA	NA	NA	108394795	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.326	chr9	+	3346	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	0	-1	multi-exon	FALSE	canonical	3	61	junction_1	223.453440340488	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCGCTTTTTTTTTTT	1659	False	NA	3	True	AGTAAA	-7	NA	108394797	108437190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.327	chr9	+	3584	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	0	2	multi-exon	FALSE	canonical	3	12	junction_1	234.191481484703	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1659	False	NA	66	True	NA	NA	NA	108394797	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.328	chr9	+	3421	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	1	2	multi-exon	FALSE	canonical	0	0	junction_2	250.965754635966	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1660	False	NA	66	True	NA	NA	NA	108394798	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405885_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.329	chr9	+	3601	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	3	2	multi-exon	FALSE	canonical	3	8	junction_2	279.742207182504	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1662	False	NA	66	True	NA	NA	NA	108394800	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.33	chr9	+	4554	19	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-3	1	intron_retention	FALSE	canonical	3	16	junction_17	154.872548157637	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTGGGTGCAGTGTGT	NA	False	NA	40	True	NA	NA	NA	108225092	108269720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261715_108262005_108262156_108268178_108268268_108268877
ES.36143.330	chr9	+	3579	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	9	2	multi-exon	FALSE	canonical	3	19	junction_3	288.786841805509	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1668	False	NA	66	True	NA	NA	NA	108394806	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.331	chr9	+	3472	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	10	-52	multi-exon	FALSE	non_canonical	0	0	junction_7	270.122268611827	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTCTTATTCTAGTTG	1669	False	NA	12	True	TATAAA	-19	NA	108394807	108437310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433144_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.332	chr9	+	3443	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	10	2	multi-exon	FALSE	canonical	1	17	junction_9	255.344115428475	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1669	False	NA	66	True	NA	NA	NA	108394807	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436451
ES.36143.333	chr9	+	4426	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	10	0	intron_retention	FALSE	canonical	3	19	junction_3	273.856184885425	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1669	False	NA	64	True	NA	NA	NA	108394807	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108396026_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.334	chr9	+	3493	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	10	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	284.129917467344	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1669	False	NA	61	True	NA	NA	NA	108394807	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395973_108396026_108405787_108406118_108410785_108411818_108418886_108419061_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.335	chr9	+	4252	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	10	-3	intron_retention	FALSE	canonical	3	19	junction_3	273.856184885425	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCATGCGCTTTTTTTTT	1669	False	NA	1	True	AGTAAA	-5	NA	108394807	108437188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108396026_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.336	chr9	+	3674	13	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	10	2	multi-exon	FALSE	canonical	0	0	junction_2	313.130818863654	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1669	False	NA	66	True	NA	NA	NA	108394807	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108396916_108396953_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.337	chr9	+	4316	10	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	10	2	intron_retention	FALSE	non_canonical	0	0	junction_6	245.105318758999	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1669	False	NA	66	True	NA	NA	NA	108394807	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433144_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.338	chr9	+	6276	23	Fusion	ENSMUSG00000006673.15_ENSMUSG00000062867.14	novel	1858	14	NA	NA	11	-1	intron_retention	TRUE	canonical	3	141	junction_1	862.111607365148	1375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAGTTCAATGGGCA	1670	False	NA	35	True	AATAAA	-28	NA	108394808	108442782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.339	chr9	+	3812	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	-3	2	multi-exon	FALSE	canonical	0	0	junction_1	288.470718395994	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	1680	False	NA	66	True	NA	NA	NA	108394818	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395405_108395965_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.34	chr9	+	5768	21	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2	0	intron_retention	FALSE	canonical	2	3	junction_10	158.764574134156	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225093	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249925_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108268268_108268877
ES.36143.340	chr9	+	3642	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	71	-3	multi-exon	FALSE	canonical	0	0	junction_1	270.540643896624	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1754	False	NA	61	True	NA	NA	NA	108394892	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395405_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436451
ES.36143.341	chr9	+	2662	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	76	-3	multi-exon	FALSE	canonical	0	0	junction_4	263.679933703755	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1759	False	NA	61	True	NA	NA	NA	108394897	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108410888_108411640_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.342	chr9	+	3519	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	79	4	multi-exon	FALSE	canonical	0	0	junction_2	289.943881717574	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAGAACGTGTCTTTA	1762	False	NA	68	True	NA	NA	NA	108394900	108437366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395901_108396026_108396916_108396953_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.343	chr9	+	2379	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	80	-3	multi-exon	FALSE	canonical	3	18	junction_3	279.570481848473	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1763	False	NA	61	True	NA	NA	NA	108394901	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.344	chr9	+	3076	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	80	-107	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	767	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATGGAAGAAGAATAAGG	1763	False	NA	NA	False	CATAAA	-10	NA	108394901	108437084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.345	chr9	+	3435	12	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	80	-3	multi-exon	FALSE	canonical	0	0	junction_3	294.361053388634	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1763	False	NA	61	True	NA	NA	NA	108394901	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108406741_108406766_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.347	chr9	+	3357	11	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	721	3	NA	NA	128	-3	multi-exon	TRUE	canonical	0	0	junction_3	273.023808485634	769	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	1811	False	NA	61	True	NA	NA	NA	108394949	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410791_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.348	chr9	+	3216	10	Fusion	ENSMUSG00000006673.15_ENSMUSG00000103970.2	novel	756	3	NA	NA	216	0	multi-exon	TRUE	non_canonical	0	0	junction_2	267.98373822047	769	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1899	False	NA	64	True	NA	NA	NA	108395037	108437362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108395176_108405787_108406122_108410791_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.349	chr9	+	3647	7	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	347	2	intron_retention	FALSE	canonical	3	596	junction_3	46.8994195652308	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	8026	False	NA	66	True	NA	NA	NA	108405957	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108434248_108436444
ES.36143.35	chr9	+	6728	19	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2	2	intron_retention	FALSE	canonical	3	580	junction_17	69.9397668544464	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108225093	108269721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108262156_108265475_108268268_108268877
ES.36143.350	chr9	+	9021	1	FSM	ENSMUSG00000103621.2	ENSMUST00000193127.2	1934	1	-1419	-5668	-1419	5668	mono-exon	FALSE	NA	NA	NA	NA	NA	720	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTAAGTAGTGATTAA	8680	False	NA	NA	False	NA	NA	NA	108406611	108415632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108406600_108415600
ES.36143.351	chr9	+	4773	2	NNC	ENSMUSG00000006673.15	novel	565	2	NA	NA	5038	4531	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAATACTAAGTA	NA	False	NA	NA	False	NA	NA	NA	108410648	108415624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108412084_108412286
ES.36143.353	chr9	+	7252	4	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	32868	-2	-6236	2	3prime_fragment	FALSE	canonical	3	639	junction_2	48.5821183381522	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	NA	False	NA	66	True	NA	NA	NA	108427180	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108433270_108433606_108433759_108434156_108434248_108436444
ES.36143.354	chr9	+	7925	2	FSM	ENSMUSG00000006673.15	ENSMUST00000194387.2	647	2	-6512	-766	-6174	2	multi-exon	FALSE	canonical	3	744	junction_1	0	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGAGAACGTGTCTT	NA	False	NA	66	True	NA	NA	NA	108427242	108437364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108434248_108436444
ES.36143.355	chr9	+	3669	2	NNC	ENSMUSG00000006673.15	novel	647	2	NA	NA	-250	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	NA	False	NA	61	True	NA	NA	NA	108433166	108437359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108434380_108434903
ES.36143.356	chr9	+	2932	11	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	1280	junction_10	441.761259052896	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1133	False	NA	16	True	AATAAA	-9	NA	108437622	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108438898_108438981_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.357	chr9	+	2261	10	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	1280	junction_9	449.462147707927	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGTGACAACT	1136	False	NA	14	True	AATAAA	-7	NA	108437625	108442761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108439580_108439990_108440079_108440334_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442610_108442696
ES.36143.358	chr9	+	1942	13	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1280	junction_12	412.141991106625	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1147	False	NA	16	True	AATAAA	-9	NA	108437636	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.359	chr9	+	2097	13	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1280	junction_12	410.346288382007	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1147	False	NA	16	True	AATAAA	-9	NA	108437636	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.36	chr9	+	3683	16	ISM	ENSMUSG00000032612.15	ENSMUST00000194224.6	3457	18	21	2888	-2	-2888	5prime_fragment	FALSE	canonical	3	586	junction_10	72.4549208512131	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGATTCTATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	108225093	108260214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526
ES.36143.360	chr9	+	2808	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	50	junction_7	748.884967277937	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1147	False	NA	16	True	AATAAA	-9	NA	108437636	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.361	chr9	+	1912	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	2	junction_4	767.017169848873	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGTGACAACT	1147	False	NA	14	True	AATAAA	-7	NA	108437636	108442761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439580_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.362	chr9	+	2293	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	4	intron_retention	FALSE	canonical	3	1280	junction_11	416.754838053888	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1147	False	NA	25	True	AATAAA	-18	NA	108437636	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.364	chr9	+	1758	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1147	False	NA	16	True	AATAAA	-9	NA	108437636	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.365	chr9	+	2348	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1280	junction_11	427.754351379348	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGTGACAACT	1150	False	NA	14	True	AATAAA	-7	NA	108437639	108442761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.366	chr9	+	2635	13	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	2	4	intron_retention	FALSE	canonical	3	1280	junction_12	412.830540967545	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1150	False	NA	25	True	AATAAA	-18	NA	108437639	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.367	chr9	+	2336	11	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	2	-3	intron_retention	FALSE	canonical	3	1280	junction_10	445.663157552876	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAAAAAAGTGACAAC	1150	False	NA	13	True	AATAAA	-6	NA	108437639	108442760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108439580_108439990_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.368	chr9	+	4155	5	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	2	4	intron_retention	FALSE	canonical	3	1479	junction_3	426.92644272755	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1150	False	NA	25	True	AATAAA	-18	NA	108437639	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108439580_108439990_108440711_108440794_108442445_108442525
ES.36143.369	chr9	+	2067	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-13	0	intron_retention	FALSE	canonical	3	1280	junction_11	425.701404684567	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1166	False	NA	16	True	AATAAA	-9	NA	108437655	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.370	chr9	+	2176	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-13	4	intron_retention	FALSE	canonical	3	50	junction_8	894.416056790478	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1166	False	NA	25	True	AATAAA	-18	NA	108437655	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442610_108442696
ES.36143.371	chr9	+	4584	4	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-4	4	intron_retention	FALSE	non_canonical	0	0	junction_3	970.396597044505	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1175	False	NA	25	True	AATAAA	-18	NA	108437664	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108437831_108438232_108440711_108440794_108441348_108441385
ES.36143.372	chr9	+	4096	4	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	1479	junction_3	443.754686986202	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGTGACAACT	1176	False	NA	14	True	AATAAA	-7	NA	108437665	108442761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108440711_108440794
ES.36143.373	chr9	+	4110	4	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-3	4	intron_retention	FALSE	canonical	3	2351	junction_1	98.4219939286382	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1176	False	NA	25	True	AATAAA	-18	NA	108437665	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108442445_108442525
ES.36143.374	chr9	+	2898	11	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	50	junction_5	952.670294488077	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1177	False	NA	16	True	AATAAA	-9	NA	108437666	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108439580_108439990_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.375	chr9	+	1653	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	701.452575714375	612	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1177	False	NA	16	True	AATAAA	-9	NA	108437666	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108437831_108438232_108438279_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.376	chr9	+	3637	8	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	1280	junction_7	509.717008320724	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAGTGACAACTG	1178	False	NA	15	True	AATAAA	-8	NA	108437667	108442762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.378	chr9	+	1685	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	708.88594988251	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1178	False	NA	16	True	AATAAA	-9	NA	108437667	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108437861_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.379	chr9	+	1643	14	NNC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	677.463534248661	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1178	False	NA	16	True	AATAAA	-9	NA	108437667	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442614_108442712
ES.36143.380	chr9	+	1736	13	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1280	junction_12	397.760711148466	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1178	False	NA	16	True	AATAAA	-9	NA	108437667	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442610_108442696
ES.36143.381	chr9	+	1730	13	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	4	-4	intron_retention	FALSE	canonical	3	1280	junction_12	407.613200023421	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGGAAAAAAAAAGTGACAA	1183	False	NA	12	True	AATAAA	-5	NA	108437672	108442759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108438282_108438795_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.382	chr9	+	4417	4	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	4	4	intron_retention	FALSE	canonical	3	1479	junction_3	410.095923738175	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	1183	False	NA	25	True	AATAAA	-18	NA	108437672	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108438282_108438795_108440535_108440619_108440711_108440794
ES.36143.384	chr9	+	4022	6	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1280	junction_5	530.52600313274	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1187	False	NA	16	True	AATAAA	-9	NA	108437676	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108437831_108438232_108439580_108439990_108440711_108440794_108442445_108442525_108442610_108442696
ES.36143.385	chr9	+	1849	13	ISM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	391	20	197	0	3prime_fragment	FALSE	canonical	3	1280	junction_12	411.311815685159	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	1386	False	NA	16	True	AATAAA	-9	NA	108437875	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.386	chr9	+	4201	2	FSM	ENSMUSG00000062867.14	ENSMUST00000195456.2	818	2	-1991	-1392	798	-2	multi-exon	FALSE	canonical	3	1479	junction_1	0	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGTGACAACT	1987	False	NA	14	True	AATAAA	-7	NA	108438476	108442761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108440711_108440794
ES.36143.388	chr9	+	2497	1	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	-58	4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	612	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGATCTTTGAGT	3786	False	NA	25	True	AATAAA	-18	NA	108440275	108442772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108440300_108442800
ES.36143.389	chr9	+	1984	6	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	22	0	intron_retention	FALSE	canonical	3	1280	junction_5	541.377723959898	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	3866	False	NA	16	True	AATAAA	-9	NA	108440355	108442763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108440535_108440619_108440711_108440794_108441978_108442064_108442445_108442525_108442610_108442696
ES.36143.39	chr9	+	3436	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	155.783616428019	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	45	True	CATAAA	-2	NA	108225093	108269725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249925_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.390	chr9	+	1715	5	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	228	-7	intron_retention	FALSE	canonical	3	1280	junction_4	569.375315587179	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTGGGAAAAAAAAAGTGA	4206	False	NA	9	True	AATAAA	-2	NA	108440695	108442756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ES.36143.41	chr9	+	3478	23	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-1	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	153.176510563564	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGCTCTCCCTTAAAA	NA	False	NA	8	True	GATAAA	-20	NA	108225094	108269688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258596_108258680_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.43	chr9	+	3234	21	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	160.49126923294	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATTTGATGTTGTCCT	NA	False	NA	7	True	AGTAAA	-11	NA	108225096	108269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239874_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.47	chr9	+	3346	22	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	4	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	154.349913157118	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225099	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261580_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.48	chr9	+	4725	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	16	junction_18	159.681053294257	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225100	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
ES.36143.5	chr9	+	2983	23	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	153.176510563564	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGGGTGCAGTGTG	NA	False	NA	39	True	NA	NA	NA	108225038	108269719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877_108268987_108269653
ES.36143.50	chr9	+	3286	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	156.42863666013	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225101	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233701_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.52	chr9	+	5735	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	10	intron_retention	FALSE	canonical	3	580	junction_17	65.8162471837448	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGTGTGTGGCATTGTT	NA	False	NA	49	True	CATAAA	-6	NA	108225102	108269729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108249986_108250805_108250890_108251422_108251518_108255634_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.53	chr9	+	3281	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	156.710675538281	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTTGATGTTGTCCTCT	NA	False	NA	9	True	AGTAAA	-13	NA	108225102	108269457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245060_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.55	chr9	+	2651	19	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.810304215133	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225102	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108243989_108250832_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.58	chr9	+	3163	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	155.783616428019	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225102	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249925_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.59	chr9	+	2957	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	-189	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	155.783616428019	712	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGAGCTCAATTGTGG	NA	False	NA	NA	False	TTTAAA	-19	NA	108225102	108269255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249925_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.6	chr9	+	4180	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-9	2	intron_retention	FALSE	canonical	3	580	junction_17	68.9343499159741	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108225042	108269721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.60	chr9	+	5944	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	8	intron_retention	FALSE	canonical	3	580	junction_17	67.8003832346027	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCTCTAGTTCTTTG	NA	False	NA	18	True	AGTAAA	-22	NA	108225102	108269466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.61	chr9	+	3860	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	7	3	intron_retention	FALSE	canonical	3	580	junction_17	68.9343499159741	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225102	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.63	chr9	+	3305	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-7	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	206.875064995777	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCAAATTTGATGTTG	NA	False	NA	3	True	AGTAAA	-7	NA	108225104	108269451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265483_108265580_108268178_108268265_108268877
ES.36143.64	chr9	+	11848	17	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-7	2	intron_retention	FALSE	canonical	3	604	junction_11	67.9252518858046	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108225104	108269721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108265580_108268178_108268268_108268877
ES.36143.65	chr9	+	3331	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-6	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	163.454924873416	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	45	True	CATAAA	-2	NA	108225105	108269725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.66	chr9	+	3067	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	163.454924873416	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225105	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.7	chr9	+	3517	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-9	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	158.346542431466	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108225042	108269721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.72	chr9	+	3309	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	156.735416960256	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225110	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237413_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.73	chr9	+	3183	21	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	206.731008801292	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATTTGATGTTGTCCT	NA	False	NA	7	True	AGTAAA	-11	NA	108225110	108269455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268265_108268877
ES.36143.74	chr9	+	2566	17	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	174.009417399605	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225110	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225169_108243136_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.76	chr9	+	6422	19	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	28	3	intron_retention	FALSE	canonical	3	580	junction_17	69.9397668544464	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGTCCTCTAGTT	NA	False	NA	13	True	AGTAAA	-17	NA	108225139	108269461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108262156_108265475_108268268_108268877
ES.36143.77	chr9	+	3540	22	NNC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	156.665523226396	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGGGTGCAGTGTG	NA	False	NA	39	True	NA	NA	NA	108225141	108269719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240042_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.78	chr9	+	3487	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	2996	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	154.742011102351	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGGGTGCAGTGTG	NA	False	NA	39	True	NA	NA	NA	108228107	108269719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261580_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.79	chr9	+	8801	14	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2088	11	intron_retention	FALSE	canonical	3	586	junction_4	67.5207616547523	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGTGGCATTGTTT	NA	False	NA	50	True	CATAAA	-7	NA	108243034	108269730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108268268_108268877
ES.36143.8	chr9	+	5107	20	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-7	6	intron_retention	FALSE	canonical	3	580	junction_17	50.0403715130437	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGCAGTGTGTGGCAT	NA	False	NA	45	True	CATAAA	-2	NA	108225044	108269725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108250890_108251422_108251518_108255634_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.80	chr9	+	4289	15	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-2002	2	intron_retention	FALSE	canonical	3	580	junction_12	66.5805098036526	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGGTGCAGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108243120	108269721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108243170_108243959_108244078_108245017_108245192_108248099_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.81	chr9	+	5742	10	NIC	ENSMUSG00000032612.15	novel	3436	21	NA	NA	-993	-31	intron_retention	FALSE	canonical	3	12	junction_5	222.672155620969	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGCTCTCCCTTAAAA	NA	False	NA	8	True	GATAAA	-20	NA	108248898	108269688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108249986_108250805_108250890_108251422_108251518_108255634_108258752_108261283_108261355_108261580_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.82	chr9	+	203	2	Intergenic	novelGene_29399	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATGTCAGGCAATGGT	NA	False	NA	NA	False	NA	NA	NA	108252898	108417037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108253043_108416978
ES.36143.83	chr9	+	774	3	ISM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	40362	263	-2601	-2	3prime_fragment	FALSE	canonical	3	677	junction_2	17.5	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTTGATGTTGTCCTC	1396	False	NA	8	True	AGTAAA	-12	NA	108265473	108269456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108265580_108268178_108268268_108268877
ES.36143.84	chr9	+	173	1	Genic_Genomic	ENSMUSG00000104399.2	novel	NA	NA	NA	NA	1010	59	mono-exon	FALSE	NA	NA	NA	NA	NA	685	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTAAATTTAAAAT	3213	False	NA	NA	False	NA	NA	NA	108267290	108267463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_108267300_108267500
ES.36143.85	chr9	+	2863	1	Genic_Genomic	ENSMUSG00000032611.10	novel	NA	NA	NA	NA	-15	-2118	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATATAGGCCTAAGGGGG	5911	False	NA	NA	False	NA	NA	NA	108269988	108272851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_108270000_108272900
ES.36143.86	chr9	+	957	2	ISM	ENSMUSG00000032611.10	ENSMUST00000035234.6	1101	4	205	2121	205	-2121	internal_fragment	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGATATAGGCCTAAGG	6160	False	NA	NA	False	NA	NA	NA	108270237	108272848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108270839_108272492
ES.36143.87	chr9	+	173	1	Intergenic	novelGene_29400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGCAATCAACTCC	NA	False	NA	NA	False	NA	NA	NA	108277464	108277637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108277500_108277600
ES.36143.88	chr9	+	179	1	Intergenic	novelGene_29403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTTAAGGATAAA	4689	False	NA	NA	False	NA	NA	NA	108332369	108332548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108332400_108332500
ES.36143.89	chr9	+	1777	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	-14	1329	-14	-1197	multi-exon	FALSE	canonical	3	208	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTGGTGTGTGGG	173	False	NA	66	True	NA	NA	NA	108337711	108341808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.9	chr9	+	3248	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	158.346542431466	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGATGTTGTCCTCTA	NA	False	NA	10	True	AGTAAA	-14	NA	108225048	108269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108225218_108228108_108228237_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ES.36143.90	chr9	+	2965	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	9	118	1	14	multi-exon	FALSE	canonical	3	208	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGCTGAATTAAGCATC	196	False	NA	28	True	AATAAA	-21	NA	108337734	108343019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.91	chr9	+	1889	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	10	1193	2	-1061	multi-exon	FALSE	canonical	3	208	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGAGAGATATGGGGA	197	False	NA	NA	False	ATTAAA	-15	NA	108337735	108341944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.92	chr9	+	636	1	NIC	ENSMUSG00000049305.7	novel	3092	2	NA	NA	6	-2091	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATAAATAAATAAATA	201	False	NA	NA	False	NA	NA	NA	108337739	108338375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108337700_108338400
ES.36143.93	chr9	+	3076	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	16	0	8	0	multi-exon	FALSE	canonical	3	208	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGAGATGGCTCAG	203	False	NA	NA	False	AATAAA	-13	NA	108337741	108343137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.94	chr9	+	1659	2	FSM	ENSMUSG00000049305.7	ENSMUST00000193269.2	384	2	12	-1287	12	-1252	multi-exon	FALSE	canonical	2	9	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCGGTCTCCTTGCTC	207	False	NA	11	True	NA	NA	NA	108337745	108341753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337788_108340136
ES.36143.95	chr9	+	4605	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	28	-1541	20	1541	multi-exon	FALSE	canonical	3	208	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAGTGGGGCAGGAGT	215	False	NA	NA	False	NA	NA	NA	108337753	108344678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.96	chr9	+	2698	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	28	366	20	-234	multi-exon	FALSE	canonical	3	208	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTTAAGAGGATTTAGC	215	False	NA	NA	False	NA	NA	NA	108337753	108342771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108337817_108340136
ES.36143.97	chr9	+	3988	1	NIC	ENSMUSG00000049305.7	novel	3092	2	NA	NA	31	-1253	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCGGTCTCCTTGCT	226	False	NA	10	True	NA	NA	NA	108337764	108341752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108337800_108341800
ES.36143.98	chr9	+	2949	1	Genic_Genomic	ENSMUSG00000049305.7	novel	NA	NA	NA	NA	3241	1671	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCTGGGTGTGGTAG	1552	False	NA	NA	False	AATAAA	-24	NA	108341859	108344808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_108341900_108344800
ES.36143.99	chr9	+	5638	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	-7	-2	-7	2	multi-exon	TRUE	canonical	3	106	junction_6	29.6719037980376	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTCTGGCCTTTGAT	9085	False	NA	21	True	AATAAA	-18	NA	108357048	108367731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ES.36144.10	chr9	-	161	1	Intergenic	novelGene_29401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGACGCAAG	5142	False	NA	NA	False	NA	NA	NA	108301017	108300856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108300900_108301000
ES.36144.2	chr9	-	2936	6	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3338	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.55824251627882	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGAAAGGTTATTGTTT	NA	False	NA	-3	True	ATTAAA	-25	NA	108309021	108280688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108283054_108283809_108283914_108294520_108294685_108298588_108298761_108305614_108305682_108308957
ES.36144.3	chr9	-	2963	9	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3357	119	at_least_one_novel_splicesite	TRUE	non_canonical	2	8	junction_1	5.30919014539883	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGAAAGGTTATTGT	NA	False	NA	-5	True	ATTAAA	-23	NA	108309040	108280690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108280803_108280916_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588_108298761_108305614_108305682_108308970
ES.36144.4	chr9	-	2862	6	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3357	117	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	7.57891812859857	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGGGAAAGGTTATT	NA	False	NA	-7	True	ATTAAA	-21	NA	108309040	108280692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108283054_108283809_108283914_108289691_108289780_108298588_108298761_108305614_108305682_108308970
ES.36144.5	chr9	-	2931	7	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3364	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.84433277428107	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGGGAAAGGTTATT	NA	False	NA	-7	True	ATTAAA	-21	NA	108309047	108280692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108298588_108298761_108305614_108305682_108308957
ES.36144.6	chr9	-	3063	8	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3347	115	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	4.97750039719553	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCATTGGGAAAGGTTA	NA	False	NA	-9	True	ATTAAA	-19	NA	108309030	108280694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588_108298761_108305614_108305682_108308970
ES.36144.7	chr9	-	2675	6	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3377	112	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_3	8.00999375780031	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACAATCATTGGGAAAGG	NA	False	NA	-12	True	ATTAAA	-16	NA	108309060	108280697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108280803_108280916_108283054_108283809_108283914_108298588_108298761_108305614_108305682_108308970
ES.36144.8	chr9	-	2900	8	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3354	108	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_4	7.45325569185462	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGACAATCATTGGGA	NA	False	NA	-16	True	ATTAAA	-12	NA	108309037	108280701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108280803_108280916_108283054_108283809_108283914_108289691_108289780_108294520_108294685_108298588_108298761_108305614_108305682_108308970
ES.36144.9	chr9	-	735	3	NNC	ENSMUSG00000047220.6	novel	2890	7	NA	NA	-3361	-17357	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAGTTTATTCATGAC	NA	False	NA	NA	False	NA	NA	NA	108309044	108298166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108298761_108305614_108305682_108308970
ES.36145.1	chr9	-	158	1	Intergenic	novelGene_29402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	7148	False	NA	NA	False	NA	NA	NA	108319568	108319410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108319400_108319600
ES.36146.1	chr9	-	2331	6	FSM	ENSMUSG00000032609.13	ENSMUST00000035232.13	1897	6	-407	-27	17	5	multi-exon	TRUE	canonical	3	5	junction_5	2.71293199325011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGTTTCTTTGAAGCC	9969	False	NA	-1	True	AATAAA	-19	NA	108329983	108324829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108328074_108328591_108329515
ES.36146.3	chr9	-	3531	3	NIC	ENSMUSG00000032609.13	novel	2956	11	NA	NA	-27	0	intron_retention	FALSE	canonical	3	5	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGGGGTTTCTTTG	NA	False	NA	-6	True	AATAAA	-14	NA	108329630	108324834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108325685_108326024_108328591_108329515
ES.36146.4	chr9	-	3293	11	NNC	ENSMUSG00000032609.13	novel	2956	11	NA	NA	-327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.80520551069359	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGGGGTTTCTTTG	2726	False	NA	-6	True	AATAAA	-14	NA	108337604	108324834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108327477_108327692_108328074_108328591_108329515_108329939_108331991_108332111_108335875_108336036_108336423_108336509_108337170
ES.36146.5	chr9	-	3726	4	NIC	ENSMUSG00000032609.13	novel	2718	11	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	5	junction_3	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGGTGTGGGGTTT	9983	False	NA	-11	True	AATAAA	-9	NA	108329969	108324839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108325685_108326024_108326127_108326265_108328591_108329515
ES.36146.6	chr9	-	3412	5	NIC	ENSMUSG00000032609.13	novel	2718	11	NA	NA	16	-5	intron_retention	FALSE	canonical	3	5	junction_4	3.03108891324554	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATCTGGTGTGGGGTTT	9968	False	NA	-11	True	AATAAA	-9	NA	108329984	108324839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108328591_108329515
ES.36147.1	chr9	-	2355	1	Antisense	novelGene_ENSMUSG00000049305.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCGGCTTGAGCCAGG	5308	False	NA	NA	False	NA	NA	NA	108342425	108340070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_108340100_108342400
ES.36148.1	chr9	-	180	1	Intergenic	novelGene_29404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTTTTTATACAGC	2025	False	NA	NA	False	NA	NA	NA	108345708	108345528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108345500_108345700
ES.36149.1	chr9	-	181	1	Intergenic	novelGene_29405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGGATTTGAA	4586	False	NA	NA	False	NA	NA	NA	108354509	108354328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108354300_108354500
ES.3615.1	chr10	-	2108	3	Antisense	novelGene_ENSMUSG00000005897.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAAGAGTTTACAAAGC	7822	False	NA	NA	False	NA	NA	NA	94028914	94022398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_94024148_94026477_94026618_94028695
ES.36150.1	chr9	-	178	1	Intergenic	novelGene_29406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	108383000	108382822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108382800_108383000
ES.36151.1	chr9	-	177	1	Intergenic	novelGene_29407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	108402406	108402229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108402200_108402400
ES.36152.1	chr9	-	228	1	Intergenic	novelGene_29408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACCAACTAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	108412283	108412055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108412100_108412300
ES.36153.1	chr9	-	6787	1	Intergenic	novelGene_29409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAACTACTCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	108433001	108426214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108426200_108433000
ES.36154.1	chr9	-	4708	1	Genic_Genomic	ENSMUSG00000070283.5	novel	NA	NA	NA	NA	887	4414	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACCCCCCAAACCAAAAA	9747	False	NA	NA	False	NA	NA	NA	108443029	108438321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_108438300_108443000
ES.36154.2	chr9	-	1492	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	-7	2	-7	-2	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATACTGGATCTGTTTT	8136	False	NA	NA	False	NA	NA	NA	108444640	108442737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ES.36154.3	chr9	-	1164	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	0	323	0	1	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGCTCAGTTTGGCT	8143	False	NA	-1	True	NA	NA	NA	108444633	108443058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ES.36154.4	chr9	-	870	3	FSM	ENSMUSG00000070283.5	ENSMUST00000193242.2	852	3	-7	-11	-7	-5	multi-exon	FALSE	canonical	3	450	junction_1	48.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTTGTTGCTCAGT	8660	False	NA	-7	True	NA	NA	NA	108444116	108443064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108443275_108443357_108443951_108444049
ES.36154.5	chr9	-	1009	2	ISM	ENSMUSG00000070283.5	ENSMUST00000193242.2	852	3	-47	-11	-27	-5	intron_retention	FALSE	canonical	3	450	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTTGTTGCTCAGT	8620	False	NA	-7	True	NA	NA	NA	108444156	108443064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108443275_108443357
ES.36155.1	chr9	+	4378	8	Fusion	ENSMUSG00000103103.2_ENSMUSG00000019039.15	novel	1746	12	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_1	56.5609658434406	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	8242	False	NA	13	True	AATAAA	-15	NA	108444731	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108445380_108445682_108447645_108447762_108448014_108448090_108448171_108448243_108448874_108448980_108449497_108449591_108449661_108449749
ES.36155.10	chr9	+	1974	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	1	intron_retention	FALSE	canonical	3	128	junction_6	19.4679223339318	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447094	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
ES.36155.11	chr9	+	1737	12	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.5418910536663	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447095	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447275_108447348_108447649_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.12	chr9	+	1896	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	3	83	junction_8	27.3455257359916	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449661_108449749
ES.36155.13	chr9	+	1963	9	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	0	0	junction_1	47.7879430400598	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447279_108447355_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591
ES.36155.14	chr9	+	2685	3	ISM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	12	0	-12	0	intron_retention	FALSE	canonical	3	136	junction_2	2	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447096	108449973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108447275_108447348_108447645_108447762
ES.36155.15	chr9	+	1861	10	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	0	intron_retention	FALSE	canonical	2	2	junction_9	44.7282604619341	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447096	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449646_108449749
ES.36155.16	chr9	+	2009	8	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	4	intron_retention	FALSE	canonical	2	4	junction_2	49.3694940097173	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGGCGTGTTCTTGG	NA	False	NA	19	True	AATAAA	-21	NA	108447096	108449977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980
ES.36155.17	chr9	+	1533	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	0	0	junction_8	47.6969600708473	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449591
ES.36155.18	chr9	+	1801	11	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	1	intron_retention	FALSE	canonical	3	83	junction_8	25.9470614906582	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447096	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449497_108449591_108449661_108449749
ES.36155.19	chr9	+	2367	6	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-12	0	intron_retention	FALSE	canonical	2	4	junction_2	58.1948451325373	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447096	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448874_108448980
ES.36155.2	chr9	+	4315	9	Fusion	ENSMUSG00000103103.2_ENSMUSG00000019039.15	novel	1746	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	128	junction_5	19.382659776202	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGAGTGAGGCGTGTT	8244	False	NA	14	True	AATAAA	-16	NA	108444733	108449972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
ES.36155.20	chr9	+	1907	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-5	1	intron_retention	FALSE	canonical	2	4	junction_2	51.6163733712472	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447103	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
ES.36155.21	chr9	+	1732	12	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	45.2504508904069	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447106	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448634_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.22	chr9	+	1864	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	128	junction_6	18.4357409183867	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447109	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
ES.36155.23	chr9	+	1860	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	11	1	intron_retention	FALSE	canonical	3	10	junction_5	47.0368912217046	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447123	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448634_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
ES.36155.24	chr9	+	1535	12	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	142	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.443746594352	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447254	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447275_108447387_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.25	chr9	+	1721	9	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	199	1	intron_retention	FALSE	canonical	2	2	junction_8	47.140746706008	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	NA	False	NA	13	True	AATAAA	-15	NA	108447311	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449646_108449749
ES.36155.3	chr9	+	4236	8	Fusion	ENSMUSG00000103103.2_ENSMUSG00000019039.15	novel	1746	12	NA	NA	157	1	intron_retention	FALSE	canonical	0	0	junction_1	51.3694104164201	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAGAGTGAGGCGTGT	8399	False	NA	13	True	AATAAA	-15	NA	108444888	108449971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108445380_108445682_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448874_108448980_108449497_108449591
ES.36155.4	chr9	+	3822	10	Fusion	ENSMUSG00000103103.2_ENSMUSG00000019039.15	novel	1746	12	NA	NA	-170	0	intron_retention	FALSE	canonical	0	0	junction_1	49.8998997994986	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	8432	False	NA	12	True	AATAAA	-14	NA	108444921	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108445380_108445682_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
ES.36155.5	chr9	+	3365	12	FSM	ENSMUSG00000103103.2_ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	-1617	-2	376	2	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGGCGTGTTCTT	8978	False	NA	17	True	AATAAA	-19	NA	108445467	108449975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.6	chr9	+	3527	5	Fusion	ENSMUSG00000103103.2_ENSMUSG00000019039.15	novel	1746	12	NA	NA	961	0	intron_retention	FALSE	canonical	3	136	junction_1	20.2113829314077	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	9563	False	NA	12	True	AATAAA	-14	NA	108446052	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108447645_108447762_108448014_108448090_108448874_108448980_108449661_108449749
ES.36155.7	chr9	+	2019	11	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	83	junction_7	27.4089401473315	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447080	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.8	chr9	+	1666	12	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.5418910536663	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447086	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447275_108447348_108447628_108447820_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ES.36155.9	chr9	+	1676	12	NNC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.3652939859996	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGAGTGAGGCGTG	NA	False	NA	12	True	AATAAA	-14	NA	108447094	108449970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449442_108449497_108449591_108449661_108449749
ES.36156.1	chr9	-	4189	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	-26	0	-26	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5725	False	NA	-1	True	AATAAA	-20	NA	108455964	108449509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
ES.36156.10	chr9	-	4443	2	NIC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	71	-4	intron_retention	FALSE	canonical	3	171	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGTGCCTTACCAT	5822	False	NA	-5	True	AATAAA	-16	NA	108455867	108449513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108453782_108455692
ES.36156.2	chr9	-	3973	7	NNC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	78	0	intron_retention	FALSE	canonical	0	0	junction_5	68.2285782417375	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5829	False	NA	-1	True	AATAAA	-20	NA	108455860	108449509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453059_108453170_108453782_108455692
ES.36156.3	chr9	-	4211	5	NIC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	27	0	intron_retention	FALSE	canonical	3	171	junction_4	14.1950695665784	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5778	False	NA	-1	True	AATAAA	-20	NA	108455911	108449509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
ES.36156.4	chr9	-	4143	5	NIC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	114	0	intron_retention	FALSE	canonical	3	171	junction_4	14.7394029729837	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5865	False	NA	-1	True	AATAAA	-20	NA	108455824	108449509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108450613_108450687_108450807_108450892_108451200_108451299_108453782_108455692
ES.36156.7	chr9	-	3924	7	NNC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	69	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	68.2285782417375	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGCCTTACCATCT	5820	False	NA	-3	True	AATAAA	-18	NA	108455869	108449511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108452532_108452699_108453782_108455692
ES.36156.8	chr9	-	4034	6	NNC	ENSMUSG00000066357.7	novel	4163	6	NA	NA	120	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	74.0405294416511	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGCCTTACCATCT	5871	False	NA	-3	True	AATAAA	-18	NA	108455818	108449511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453775_108455692
ES.36157.1	chr9	-	1858	10	NNC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-12	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	20.6451500896027	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGTGTGTGGGG	NA	False	NA	48	True	NA	NA	NA	108474791	108456014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108459332_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ES.36157.10	chr9	-	1337	8	NNC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	406	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.743329392499	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGCCCGCTTGGGGGAGG	NA	False	NA	0	True	AATAAA	-34	NA	108474139	108456062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460842_108461032_108474097
ES.36157.11	chr9	-	3710	6	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	12	junction_3	18.1262240965955	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGCCCGCTTGGGGGAG	NA	False	NA	-1	True	AATAAA	-33	NA	108474787	108456063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108459379_108460045_108460143_108460840_108461032_108474097
ES.36157.12	chr9	-	3199	7	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	-16	intron_retention	FALSE	canonical	3	31	junction_6	10.6718737290547	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGCGAGCTAAGCGC	NA	False	NA	-14	True	AATAAA	-20	NA	108474786	108456076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108460143_108460840_108461032_108474097_108474180_108474406
ES.36157.13	chr9	-	2355	8	NNC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	1	-17	intron_retention	FALSE	canonical	0	0	junction_7	24.5148851075573	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCCGGCGAGCTAAGCG	NA	False	NA	-15	True	AATAAA	-19	NA	108474778	108456077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461023_108474406
ES.36157.14	chr9	-	2495	9	NNC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-8	-21	intron_retention	FALSE	canonical	0	0	junction_8	23.1179043167844	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGGCCGGCGAGCTA	NA	False	NA	-19	True	AATAAA	-15	NA	108474787	108456081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474224_108474406
ES.36157.2	chr9	-	2510	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-7	39	intron_retention	FALSE	canonical	3	11	junction_4	18.9369843164111	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTCTCATGTGTGTGTG	NA	False	NA	41	True	NA	NA	NA	108474786	108456021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ES.36157.3	chr9	-	2682	8	NNC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-5	37	intron_retention	FALSE	canonical	0	0	junction_7	20.8316870097808	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTAGTCTCATGTGTGTG	NA	False	NA	39	True	NA	NA	NA	108474784	108456023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108460143_108460840_108461032_108474097_108474224_108474406
ES.36157.4	chr9	-	4403	5	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	1	36	intron_retention	FALSE	canonical	3	44	junction_4	8.13941029804985	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTAGTCTCATGTGTGT	NA	False	NA	38	True	NA	NA	NA	108474774	108456024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108460143_108460840_108461032_108474097
ES.36157.5	chr9	-	2404	8	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	-2	36	intron_retention	FALSE	canonical	3	31	junction_7	10.0772526220277	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTAGTCTCATGTGTGT	NA	False	NA	38	True	NA	NA	NA	108474781	108456024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ES.36157.7	chr9	-	1027	6	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	837	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	21.0142808585019	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGCCCGCTTGGGGGAGG	2391	False	NA	0	True	AATAAA	-34	NA	108459298	108456062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108459280
ES.36158.1	chr9	+	174	1	Antisense	novelGene_ENSMUSG00000064145.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTAAAGCTACA	4030	False	NA	NA	False	NA	NA	NA	108521780	108521954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_108521800_108522000
ES.36159.1	chr9	-	3882	15	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	222.231447654311	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGAGTCTTTTTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	108526540	108480139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485971_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.10	chr9	-	3985	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526594	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.100	chr9	-	2113	4	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	1688	6	NA	NA	-67	-1857	multi-exon	FALSE	canonical	3	34	junction_3	328.028454050356	911	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108530994	108495840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108497326_108521224_108521568_108522131_108522194_108530771
ES.36159.101	chr9	-	2017	4	ISM	ENSMUSG00000064145.13	ENSMUST00000194290.6	1688	6	-44	2881	7	-1864	5prime_fragment	FALSE	canonical	3	672	junction_2	89.859149042636	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108526561	108495847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.102	chr9	-	6258	1	NIC	ENSMUSG00000064145.13	novel	793	8	NA	NA	-1708	-8810	mono-exon	FALSE	NA	NA	NA	NA	NA	901	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGCCAACCT	9165	False	NA	NA	False	NA	NA	NA	108509051	108502793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108502800_108509100
ES.36159.103	chr9	-	4282	1	FSM	ENSMUSG00002076266.1	ENSMUST00020182013.1	121	1	-988	-3173	-988	3173	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTCTTTCTGCCTCA	NA	False	NA	NA	False	CATAAA	-17	NA	108531915	108527633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108527600_108531900
ES.36159.104	chr9	-	2410	1	FSM	ENSMUSG00002076266.1	ENSMUST00020182013.1	121	1	-1007	-1282	-1007	1282	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTGTATGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	108531934	108529524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108529500_108531900
ES.36159.12	chr9	-	4094	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	264.803228832278	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526584	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108523130_108523296_108526427
ES.36159.15	chr9	-	3803	15	NNC	ENSMUSG00000064145.13	novel	2160	15	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	244.802388026901	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526471	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485965_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.16	chr9	-	4152	18	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_17	307.897446189867	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526599	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108523130_108523296_108526427
ES.36159.17	chr9	-	4557	15	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-988	0	multi-exon	FALSE	canonical	1	1	junction_14	272.951965573073	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108531915	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108530771
ES.36159.18	chr9	-	4148	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	155	junction_12	232.812848060888	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526577	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.19	chr9	-	5351	13	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-39	0	intron_retention	FALSE	canonical	3	517	junction_4	115.949222602923	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108521338	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224
ES.36159.2	chr9	-	4011	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	-87	0	-81	0	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526666	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.20	chr9	-	5638	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-12	0	intron_retention	FALSE	canonical	3	17	junction_2	227.514117077134	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526553	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.21	chr9	-	3921	16	NNC	ENSMUSG00000064145.13	novel	2160	15	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	302.606998523755	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526540	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485971_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.24	chr9	-	5852	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	3	2	intron_retention	FALSE	canonical	3	359	junction_13	159.856121533824	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526538	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.25	chr9	-	7811	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-2	2	intron_retention	FALSE	canonical	3	155	junction_11	252.943770471637	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526581	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.26	chr9	-	3982	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	292.991227471063	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526561	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488972_108489912_108489973_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.27	chr9	-	3821	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	1	10	junction_11	242.713077017086	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526556	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494018_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.28	chr9	-	5932	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-1	2	intron_retention	FALSE	canonical	3	155	junction_12	234.926617384143	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526569	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.29	chr9	-	4082	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	2	intron_retention	FALSE	canonical	3	517	junction_4	116.979350174922	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526560	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.3	chr9	-	4912	16	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-984	0	multi-exon	FALSE	canonical	3	34	junction_15	215.945013577274	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108531911	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108530771
ES.36159.33	chr9	-	3890	15	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	222.231447654311	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526561	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108487086_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.34	chr9	-	3871	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	1	10	junction_11	281.510086655681	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526557	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494018_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.35	chr9	-	4010	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-28	2	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	219.891023514427	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGGAGTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	108526613	108480143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.36	chr9	-	4493	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	1	intron_retention	FALSE	canonical	3	155	junction_12	248.78517283436	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCCTGTGGAGTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	108526560	108480144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.38	chr9	-	7104	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	11	0	intron_retention	FALSE	canonical	3	155	junction_11	256.844549190711	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526557	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.39	chr9	-	4114	18	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	342.487279080815	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526561	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488590_108488642_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108523130_108523296_108526427
ES.36159.40	chr9	-	4079	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	225.877803739593	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526594	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487292_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.44	chr9	-	3808	15	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	102	0	multi-exon	FALSE	non_canonical	0	0	junction_5	286.935995138502	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108530825	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108487086_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108530771
ES.36159.45	chr9	-	3759	15	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-268	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	295.252192443777	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108521567	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485260_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224
ES.36159.46	chr9	-	4839	16	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-988	0	multi-exon	FALSE	canonical	0	0	junction_7	324.143754117418	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108531915	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108530771
ES.36159.48	chr9	-	5116	17	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-1002	0	multi-exon	FALSE	canonical	2	5	junction_7	316.622384513477	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108531929	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487292_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108530771
ES.36159.49	chr9	-	4162	18	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	328.067614771089	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526559	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108523130_108523296_108526427
ES.36159.5	chr9	-	7314	10	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9107	0	intron_retention	FALSE	canonical	3	517	junction_5	126.934609392901	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108494989	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108491035_108492223_108492346_108493876_108494028_108494570
ES.36159.50	chr9	-	3979	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	287.042244277737	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526541	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.52	chr9	-	3832	15	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	334.939440155125	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108521389	108480145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487292_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108495143_108495304_108497257_108497326_108521224
ES.36159.53	chr9	-	4217	4	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	39614	6	-1083	-1	intron_retention	FALSE	canonical	3	853	junction_1	15.3260852434302	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCCTGTGGAGTCTT	3569	False	NA	NA	False	AATAAA	-14	NA	108486965	108480146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107
ES.36159.54	chr9	-	4374	1	FSM	ENSMUSG00000064145.13	ENSMUST00000193923.2	3664	1	-711	1	34	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	999	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCCTGTGGAGTCTT	6014	False	NA	NA	False	AATAAA	-14	NA	108484520	108480146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108480100_108484500
ES.36159.55	chr9	-	3865	17	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	103	-1	multi-exon	FALSE	canonical	3	34	junction_16	275.284511914492	1014	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCCTGTGGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	108530824	108480146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108530771
ES.36159.56	chr9	-	6072	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	6	-1	intron_retention	FALSE	canonical	3	155	junction_11	254.79312336538	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCCTGTGGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	108526535	108480146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.57	chr9	-	3091	10	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	333.580241887582	1010	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCCTGTGGAGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	108526584	108480146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488921_108522131_108522194_108526427
ES.36159.58	chr9	-	4381	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	-2	intron_retention	FALSE	canonical	1	1	junction_1	292.99007188337	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAGCCTGTGGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	108526533	108480147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482904_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.59	chr9	-	3869	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-4796	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	240.782852840941	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAGCCTGTGGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	108531381	108480147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108531274
ES.36159.6	chr9	-	9611	5	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-6174	0	intron_retention	FALSE	canonical	3	517	junction_4	148.491371803213	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108492056	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108485953_108486976
ES.36159.60	chr9	-	2348	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-5133	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	289.023997435767	993	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCCTCAGCGTGTCTG	NA	False	NA	30	True	NA	NA	NA	108531718	108481830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108531495
ES.36159.62	chr9	-	2277	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	-82	1729	-76	15	multi-exon	FALSE	canonical	3	517	junction_5	114.47891605978	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526661	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.63	chr9	-	4316	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	15	intron_retention	FALSE	canonical	3	44	junction_15	272.036729546255	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526560	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108523130_108523296_108526427
ES.36159.64	chr9	-	2243	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-2	15	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526581	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.65	chr9	-	6203	14	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	90	15	combination_of_known_junctions	FALSE	canonical	1	10	junction_11	227.528813442925	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526427	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494018_108497257_108497326_108521224_108521568_108522131
ES.36159.66	chr9	-	2163	15	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	11	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	222.231447654311	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526557	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485965_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.68	chr9	-	2247	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	3	15	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	219.891023514427	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526576	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.69	chr9	-	2460	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	15	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	241.283291312653	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTTGACTTAGAATGT	NA	False	NA	-9	True	AATAAA	-26	NA	108526560	108481869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482904_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.7	chr9	-	3509	14	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	238.95720198123	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526569	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108526427
ES.36159.70	chr9	-	2183	16	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	15	14	multi-exon	FALSE	canonical	3	34	junction_15	215.945013577274	993	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTATTTGACTTAGAATG	NA	False	NA	-10	True	AATAAA	-25	NA	108530912	108481870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108530771
ES.36159.71	chr9	-	2170	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	55	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	244.519792427707	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTATTTGACTTAGAATG	NA	False	NA	-10	True	AATAAA	-25	NA	108526462	108481870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491131_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.72	chr9	-	2214	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	5	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	291.494051778458	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTATTTGACTTAGAATG	NA	False	NA	-10	True	AATAAA	-25	NA	108526563	108481870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485965_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.73	chr9	-	1716	14	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-8	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	236.66386919479	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTATTTGACTTAGAAT	NA	False	NA	-11	True	AATAAA	-24	NA	108521307	108481871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482346_108482528_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224
ES.36159.74	chr9	-	4991	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	8	9	intron_retention	FALSE	canonical	0	0	junction_8	291.034125528643	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTAGCTATTTGACTTA	NA	False	NA	-15	True	AATAAA	-20	NA	108526560	108481875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108491035_108491423_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.75	chr9	-	2167	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	5	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	226.350603170293	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTAGCTATTTGACTTA	NA	False	NA	-15	True	AATAAA	-20	NA	108526563	108481875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492229_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.76	chr9	-	3197	16	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-1007	9	multi-exon	FALSE	canonical	3	34	junction_15	234.612247477975	993	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTAGCTATTTGACTTA	NA	False	NA	-15	True	AATAAA	-20	NA	108531934	108481875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108530771
ES.36159.77	chr9	-	2054	15	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	5	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	234.465044607628	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTAGCTATTTGACTT	NA	False	NA	-16	True	AATAAA	-19	NA	108526563	108481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ES.36159.78	chr9	-	2355	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	308.737797076662	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTAGCTATTTGACTT	NA	False	NA	-16	True	AATAAA	-19	NA	108526577	108481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494566_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108523130_108523296_108526427
ES.36159.79	chr9	-	3521	6	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-2763	8	intron_retention	FALSE	canonical	3	579	junction_5	115.890638103343	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTAGCTATTTGACTT	1889	False	NA	-16	True	AATAAA	-19	NA	108488645	108481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108486999_108487095
ES.36159.8	chr9	-	6986	6	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-3646	0	intron_retention	FALSE	canonical	3	517	junction_4	153.671858191407	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	1006	False	NA	NA	False	AATAAA	-20	NA	108489528	108480140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095
ES.36159.81	chr9	-	2270	18	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	67	8	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_17	302.08792459622	989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTAGCTATTTGACTT	NA	False	NA	-16	True	AATAAA	-19	NA	108526450	108481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108523130_108523296_108526427
ES.36159.82	chr9	-	2242	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	280.481505629159	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTAGCTATTTGACTT	NA	False	NA	-16	True	AATAAA	-19	NA	108526581	108481876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484480_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.84	chr9	-	2140	15	NNC	ENSMUSG00000064145.13	novel	2160	15	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	244.802388026901	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTTAGCTATTTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	108526540	108481878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485971_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ES.36159.86	chr9	-	2165	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9237	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	223.266417836031	994	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTTAGCTATTTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	108535822	108481878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108535691
ES.36159.88	chr9	-	2769	17	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	-536	6	multi-exon	FALSE	canonical	3	34	junction_16	284.439299049463	993	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTTAGCTATTTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	108531463	108481878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108530771
ES.36159.89	chr9	-	3215	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	284.287919359494	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCTTTAGCTATTTGA	NA	False	NA	-19	True	AATAAA	-16	NA	108526546	108481879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108489967_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.90	chr9	-	3895	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	155	junction_12	235.913449289259	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526563	108481884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.91	chr9	-	1752	14	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	238.95720198123	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526556	108481884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108526427
ES.36159.93	chr9	-	5103	13	Fusion	ENSMUSG00002076266.1_ENSMUSG00000064145.13	novel	3924	16	NA	NA	70	-2	intron_retention	FALSE	canonical	3	34	junction_12	224.474509812485	993	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCTTCACCCTTTAGC	NA	False	NA	-26	True	AATAAA	-9	NA	108530857	108481886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108530771
ES.36159.96	chr9	-	2214	16	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	7	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	317.672200021762	988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGATAACACAGAGCCC	NA	False	NA	-66	True	TATAAA	-14	NA	108526561	108481926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108521224_108521565_108522131_108522194_108523130_108523296_108526427
ES.36159.97	chr9	-	4009	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	-9	-58	intron_retention	FALSE	canonical	3	155	junction_12	231.198289113239	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAGAGGCAAAGCAT	NA	False	NA	-82	True	NA	NA	NA	108526550	108481942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108482353_108482532_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
ES.36159.98	chr9	-	2074	5	NIC	ENSMUSG00000064145.13	novel	741	7	NA	NA	1	-1829	combination_of_known_junctions	FALSE	canonical	3	155	junction_1	291.631081162485	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGAAGCCAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	108526540	108495812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
ES.36159.99	chr9	-	2455	1	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	9076	-1829	mono-exon	FALSE	NA	NA	NA	NA	NA	902	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGAAGCCAAGAATTGC	NA	False	NA	NA	False	NA	NA	NA	108498267	108495812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108495800_108498300
ES.3616.1	chr10	+	563	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	10	-7	10	7	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCGTTCACACCGTC	NA	False	NA	20	True	ATTAAA	-20	NA	94034875	94056817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ES.3616.2	chr10	+	553	4	NNC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1853.32907673372	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTTGTGCGTTCAC	NA	False	NA	14	True	ATTAAA	-14	NA	94034894	94056811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94034993_94035811_94035895_94039149_94039238_94056527
ES.3616.3	chr10	+	1019	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	84	7	2	-7	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTTGCAAGATGT	NA	False	NA	4	True	NA	NA	NA	94034900	94057298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ES.3616.5	chr10	+	439	3	NIC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	1952.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCAGTGTCTTGTGCG	NA	False	NA	9	True	ATTAAA	-9	NA	94034900	94056806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94034993_94035811_94035895_94056542
ES.3616.6	chr10	+	447	3	NIC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	1638.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTTGTGCGTTC	NA	False	NA	12	True	ATTAAA	-12	NA	94034900	94056809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94034993_94039149_94039238_94056542
ES.3616.7	chr10	+	516	4	NNC	ENSMUSG00000020022.18	novel	566	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1728.7257349466	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCTTGTGCGTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	94034900	94056810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94034993_94035826_94035895_94039149_94039238_94056542
ES.36160.1	chr9	+	178	1	Intergenic	novelGene_29410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2865	False	NA	NA	False	NA	NA	NA	108537084	108537262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108537100_108537300
ES.36160.10	chr9	+	4312	8	NNC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	76	2	intron_retention	FALSE	canonical	3	30	junction_5	301.436425083876	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTGATATTTTCTCT	5153	False	NA	5	True	NA	NA	NA	108539372	108561842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108539532_108546964_108549746_108554782_108554874_108557285_108557404_108559170_108559287_108559545_108559656_108560247_108560373_108561030
ES.36160.11	chr9	+	4268	8	NIC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	77	2	intron_retention	FALSE	canonical	3	619	junction_7	107.359780406722	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTGATATTTTCTCT	5154	False	NA	5	True	NA	NA	NA	108539373	108561842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108539532_108546964_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.12	chr9	+	3463	8	NIC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	87	0	intron_retention	FALSE	canonical	3	619	junction_7	97.722639576069	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5164	False	NA	3	True	NA	NA	NA	108539383	108561840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.13	chr9	+	153	1	FSM	ENSMUSG00000032602.7	ENSMUST00000194088.2	2751	1	2092	506	2082	-506	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	7159	False	NA	NA	False	NA	NA	NA	108541378	108541531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108541400_108541500
ES.36160.14	chr9	+	180	1	Intergenic	novelGene_29412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTTTTTTTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108546426	108546606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108546400_108546600
ES.36160.15	chr9	+	1550	8	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	7666	0	-2732	0	3prime_fragment	FALSE	canonical	3	619	junction_7	106.961751699056	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	NA	False	NA	3	True	NA	NA	NA	108546962	108561840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.16	chr9	+	4486	11	NIC	ENSMUSG00000032601.14	novel	599	7	NA	NA	174	6	intron_retention	FALSE	canonical	0	0	junction_1	113.632565754717	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	6221	False	NA	26	True	AATAAA	-26	NA	108566686	108627641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108566772_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.17	chr9	+	5024	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	-53	-6	-53	6	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	1250	False	NA	26	True	AATAAA	-26	NA	108569288	108627641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.18	chr9	+	4052	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	-15	928	-15	5	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAGAAAGC	1288	False	NA	NA	False	NA	NA	NA	108569326	108626707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.19	chr9	+	4876	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	-14	103	-14	-103	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTGTAAACAAGGTTG	1289	False	NA	-21	True	ATTAAA	-22	NA	108569327	108627532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.2	chr9	+	176	2	Intergenic	novelGene_29411	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	903	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTATATGTGTATGTATA	2866	False	NA	NA	False	NA	NA	NA	108537085	108582547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108537244_108582529
ES.36160.22	chr9	+	1770	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	0	3195	0	247	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGTTTCACATTTGG	1303	False	NA	NA	False	NA	NA	NA	108569341	108624440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.23	chr9	+	3117	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	16	1832	16	-899	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACACCTGATTTCTTG	1319	False	NA	NA	False	AATAAA	-21	NA	108569357	108625803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.25	chr9	+	2770	2	NNC	ENSMUSG00000032601.14	novel	1143	10	NA	NA	19	-32948	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTCTTGTATATATTCT	1322	False	NA	NA	False	AATAAA	-14	NA	108569360	108572454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108569912_108570235
ES.36160.26	chr9	+	4771	8	NIC	ENSMUSG00000032601.14	novel	4965	11	NA	NA	19	-2	intron_retention	FALSE	canonical	0	0	junction_1	128.758276928324	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCCTGGTGTGTCTC	1322	False	NA	18	True	AATAAA	-18	NA	108569360	108627633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108569912_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.27	chr9	+	4846	10	FSM	ENSMUSG00000032601.14	ENSMUST00000195405.6	1143	10	-267	-3436	47	-6	multi-exon	FALSE	canonical	0	0	junction_8	117.999058376657	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGACTTTCCTGGTGTG	1350	False	NA	14	True	AATAAA	-14	NA	108569388	108627629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108622680_108622823_108624059
ES.36160.28	chr9	+	4862	10	NIC	ENSMUSG00000032601.14	novel	4965	11	NA	NA	60	-7	intron_retention	FALSE	canonical	0	0	junction_1	114.807084566531	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGACTTTCCTGGTGT	1363	False	NA	13	True	AATAAA	-13	NA	108569401	108627628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108569912_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.29	chr9	+	2592	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	62	2311	62	1131	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGCATTTGTCCTAAA	1365	False	NA	NA	False	NA	NA	NA	108569403	108625324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.3	chr9	+	1833	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	-48	-2	-38	2	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGTGATATTTTCTCT	5029	False	NA	5	True	NA	NA	NA	108539248	108561842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.30	chr9	+	4384	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	113	468	113	465	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAAATTGTCGCTCAC	1416	False	NA	NA	False	NA	NA	NA	108569454	108627167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.31	chr9	+	201	1	Intergenic	novelGene_29416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTGGGGATTAGCTTG	5658	False	NA	NA	False	NA	NA	NA	108575613	108575814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108575600_108575800
ES.36160.32	chr9	+	4547	11	NNC	ENSMUSG00000032601.14	novel	599	7	NA	NA	-5310	-2	intron_retention	FALSE	canonical	1	2	junction_1	113.06458331414	518	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCCTGGTGTGTCTC	NA	False	NA	18	True	AATAAA	-18	NA	108588761	108627633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108588916_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.33	chr9	+	4367	9	ISM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	24718	-6	-12	6	3prime_fragment	FALSE	canonical	3	310	junction_5	33.7527776634753	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCTCCTGTTGTA	NA	False	NA	26	True	AATAAA	-26	NA	108594059	108627641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.34	chr9	+	3963	5	ISM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	48291	-1	751	1	3prime_fragment	FALSE	canonical	3	310	junction_1	36.1005540123694	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGGTGTGTCTCCTG	NA	False	NA	21	True	AATAAA	-21	NA	108617632	108627636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ES.36160.4	chr9	+	1310	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	-33	506	-23	-506	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGGCCAAATTGCC	5044	False	NA	28	True	AATAAA	-16	NA	108539263	108561334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.5	chr9	+	1794	9	NNC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	288.301057923831	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGTGTGATATTTTCTC	5110	False	NA	4	True	NA	NA	NA	108539329	108561841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559287_108559545_108559656_108560247_108560373_108561030
ES.36160.6	chr9	+	2030	11	NNC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	396.293085985612	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATCGTGTGATATTTT	5117	False	NA	1	True	NA	NA	NA	108539336	108561838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108539532_108541148_108541230_108546623_108546832_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ES.36160.8	chr9	+	2959	7	ISM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	74	0	74	0	intron_retention	FALSE	canonical	3	844	junction_3	38.4303121102196	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5151	False	NA	3	True	NA	NA	NA	108539370	108561840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545
ES.36160.9	chr9	+	1677	9	NNC	ENSMUSG00000032602.7	novel	1783	9	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	298.574294565021	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5152	False	NA	3	True	NA	NA	NA	108539371	108561840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560278_108560373_108561030
ES.36161.1	chr9	-	206	1	Intergenic	novelGene_29413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGGATATAAACTCAGTG	NA	False	NA	NA	False	AATAAA	-7	NA	108552394	108552188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108552200_108552400
ES.36162.1	chr9	-	185	1	Intergenic	novelGene_29414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	108555160	108554975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108555000_108555200
ES.36163.1	chr9	-	153	1	Intergenic	novelGene_29415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAGAAAAAAAAA	5066	False	NA	NA	False	NA	NA	NA	108573645	108573492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108573500_108573600
ES.36164.1	chr9	-	174	1	Intergenic	novelGene_29417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCGAGGGATGGAG	NA	False	NA	NA	False	NA	NA	NA	108587122	108586948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108586900_108587100
ES.36165.1	chr9	-	84	1	Intergenic	novelGene_29418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	6291	False	NA	NA	False	NA	NA	NA	108630184	108630100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108630100_108630200
ES.36166.1	chr9	-	177	1	Intergenic	novelGene_29419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAATGTAAA	9541	False	NA	NA	False	NA	NA	NA	108640124	108639947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108639900_108640100
ES.36167.1	chr9	+	1060	5	NIC	ENSMUSG00000032599.13	novel	730	4	NA	NA	-10	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	45.778679535347	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGGCTTGGCTCACCC	NA	False	NA	3	True	AATAAA	-17	NA	108660984	108674886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673596_108673739_108673772_108673853_108673983_108674405
ES.36167.10	chr9	+	1002	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-53	-342	-10	-5	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGGCTTGGCTCACCC	NA	False	NA	3	True	AATAAA	-17	NA	108661010	108674886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
ES.36167.11	chr9	+	1107	4	NIC	ENSMUSG00000032599.13	novel	730	4	NA	NA	-5	-9	intron_retention	FALSE	canonical	3	10	junction_2	45.3455865793158	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAAAAGGCTTGGCTC	NA	False	NA	-1	True	AATAAA	-13	NA	108661015	108674882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673596_108673739_108673983_108674405
ES.36167.12	chr9	+	1327	5	NIC	ENSMUSG00000032599.13	novel	730	4	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	45.778679535347	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTGTCTTGTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	108661017	108675186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673596_108673739_108673772_108673853_108673983_108674405
ES.36167.13	chr9	+	3626	5	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	21	junction_3	39.6736688497547	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	14	True	AATACA	-18	NA	108661019	108683531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108675693_108676440_108676617_108681740_108681917_108682737
ES.36167.14	chr9	+	1294	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-43	-644	0	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108661020	108675188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
ES.36167.15	chr9	+	1314	4	NNC	ENSMUSG00000032599.13	novel	730	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9801516952444	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108661069	108675188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108661139_108673262_108673596_108673853_108673983_108674405
ES.36167.16	chr9	+	1680	4	NNC	ENSMUSG00000032599.13	novel	730	4	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	26.1916017074176	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108661096	108675188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108661532_108673262_108673596_108673853_108673983_108674405
ES.36167.17	chr9	+	1932	3	NNC	ENSMUSG00000032599.13	novel	730	4	NA	NA	38	-1	intron_retention	FALSE	canonical	2	4	junction_1	21	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTGTCTTGTAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	108661101	108675187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108661532_108673262_108673983_108674405
ES.36167.19	chr9	+	3823	1	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	4323	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	14	True	AATACA	-18	NA	108679708	108683531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108679700_108683500
ES.36167.2	chr9	+	1574	3	NIC	ENSMUSG00000032599.13	novel	607	4	NA	NA	3	-1	intron_retention	FALSE	canonical	3	46	junction_2	36.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTGTCTTGTAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	108660997	108675187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673983_108674405
ES.36167.3	chr9	+	1690	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-15	1145	11	-3	multi-exon	FALSE	canonical	3	119	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTTGGCTCACCCAC	NA	False	NA	5	True	AATAAA	-19	NA	108661005	108674888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108661070_108673262
ES.36167.4	chr9	+	1766	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	14	True	AATACA	-18	NA	108661005	108683531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
ES.36167.5	chr9	+	3549	6	NIC	ENSMUSG00000032599.13	novel	1846	6	NA	NA	11	1	intron_retention	FALSE	canonical	3	6	junction_2	39.7894458368045	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGCTGCTGTCGTTCT	NA	False	NA	15	True	AATACA	-19	NA	108661005	108683532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
ES.36167.6	chr9	+	1986	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	-14	848	12	-3	multi-exon	FALSE	canonical	3	119	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAATGTGTCTTGTAG	NA	False	NA	NA	False	AATAAA	-13	NA	108661006	108675185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108661070_108673262
ES.36167.7	chr9	+	1262	3	NIC	ENSMUSG00000032599.13	novel	607	4	NA	NA	-12	-5	intron_retention	FALSE	canonical	3	46	junction_2	36.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGGCTTGGCTCACCC	NA	False	NA	3	True	AATAAA	-17	NA	108661008	108674886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673983_108674405
ES.36167.8	chr9	+	4720	4	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	-12	-2988	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	41.2148840428633	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACCTTTTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	108661008	108680543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440
ES.36167.9	chr9	+	1175	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	16	0	-10	0	multi-exon	FALSE	canonical	3	25	junction_2	47	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108661010	108675188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108661070_108673262_108673596_108674405
ES.36168.1	chr9	-	3469	1	Intergenic	novelGene_29420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGTGTGGCTCAGGACT	NA	False	NA	NA	False	NA	NA	NA	108666744	108663275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108663300_108666700
ES.36169.1	chr9	-	1981	1	Intergenic	novelGene_29421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGCCCATTAGATGGC	NA	False	NA	NA	False	AATAAA	-13	NA	108678944	108676963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108677000_108678900
ES.3617.1	chr10	-	176	1	Intergenic	novelGene_2759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGAGCAAGTGGGGC	NA	False	NA	NA	False	NA	NA	NA	94096418	94096242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94096200_94096400
ES.36170.1	chr9	+	3075	14	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-19	-385	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	28.6732252485458	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTGTATGATGATGCG	3131	False	NA	11	True	AATAAA	-22	NA	108685547	108695658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688020_108688102_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.10	chr9	+	3510	12	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-393	intron_retention	FALSE	canonical	1	2	junction_4	24.7058730930371	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3155	False	NA	3	True	AATAAA	-14	NA	108685571	108695650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108690208_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.11	chr9	+	3184	13	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	1	-500	intron_retention	FALSE	canonical	2	7	junction_1	29.4036798528499	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAGAATCTATTTTCTC	3156	False	NA	NA	False	NA	NA	NA	108685572	108695543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688020_108688102_108688244_108688355_108688747_108688953_108689077_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.12	chr9	+	2625	7	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	1	8	intron_retention	FALSE	canonical	2	7	junction_4	29.5094146935441	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAGGACCAGTGCTGGG	3156	False	NA	NA	False	NA	NA	NA	108685572	108693328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691768_108691865
ES.36170.13	chr9	+	4446	11	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	5	-392	intron_retention	FALSE	canonical	3	72	junction_5	8.03803458564343	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3160	False	NA	4	True	AATAAA	-15	NA	108685576	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.14	chr9	+	2440	12	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	5	-393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.0643161124978	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3160	False	NA	3	True	AATAAA	-14	NA	108685576	108695650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692152_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.15	chr9	+	3139	14	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-392	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	33.8288417263196	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3161	False	NA	4	True	AATAAA	-15	NA	108685577	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688020_108688102_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108690010_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.16	chr9	+	3306	12	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-393	intron_retention	FALSE	canonical	1	1	junction_4	24.9793302982438	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGGCTTCCCTGTATG	3161	False	NA	3	True	AATAAA	-14	NA	108685577	108695650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108690010_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.17	chr9	+	2879	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	6	-392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.0780725380206	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3161	False	NA	4	True	AATAAA	-15	NA	108685577	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689831_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.18	chr9	+	3515	12	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	7	-392	intron_retention	FALSE	canonical	0	0	junction_4	25.2530989833815	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3162	False	NA	4	True	AATAAA	-15	NA	108685578	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108690219_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.19	chr9	+	3247	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-21	-391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.0780725380206	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3182	False	NA	5	True	AATAAA	-16	NA	108685598	108695652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108690219_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.2	chr9	+	3575	14	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0172694787462	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTCCGGTGCTCCCT	3141	False	NA	NA	False	AATAAA	-23	NA	108685557	108696044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108687332_108687538_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.20	chr9	+	3535	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-21	-8	intron_retention	FALSE	canonical	1	1	junction_1	24.9554975807763	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTCCAGCTAGTGTCCG	3182	False	NA	NA	False	AATAAA	-14	NA	108685598	108696035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685820_108688244_108688355_108688747_108688953_108689077_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.21	chr9	+	3013	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-19	-391	intron_retention	FALSE	canonical	3	52	junction_4	11.7859700877395	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3184	False	NA	5	True	AATAAA	-16	NA	108685600	108695652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.22	chr9	+	2905	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-19	-394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.0780725380206	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGCTTCCCTGTAT	3184	False	NA	2	True	AATAAA	-13	NA	108685600	108695649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689882_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.23	chr9	+	3038	14	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-6	-392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	33.3278496475572	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3197	False	NA	4	True	AATAAA	-15	NA	108685613	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688020_108688102_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692755_108694740
ES.36170.24	chr9	+	4416	10	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-2	-390	intron_retention	FALSE	canonical	3	52	junction_4	11.6141675934562	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTTCCCTGTATGATG	3201	False	NA	6	True	AATAAA	-17	NA	108685617	108695653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108691319_108691463_108691768_108691865_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.25	chr9	+	5054	8	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-1508	-394	intron_retention	FALSE	canonical	3	73	junction_6	6.74007206404883	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGCTTCCCTGTAT	5199	False	NA	2	True	AATAAA	-13	NA	108687615	108695649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108688355_108688747_108688953_108689077_108691319_108691463_108691768_108691865_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.26	chr9	+	2240	10	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-834	-477	intron_retention	FALSE	canonical	2	7	junction_3	24.7451204817095	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATAGGC	5873	False	NA	-81	True	NA	NA	NA	108688289	108695566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.3	chr9	+	2763	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-8	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.1849069095215	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTGGGCTTCCCTGTA	3142	False	NA	1	True	AATAAA	-12	NA	108685558	108695648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689153_108689611_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.4	chr9	+	3370	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	-5	-5	-5	5	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCGGTGCTCCCTTTCT	3145	False	NA	NA	False	AATAAA	-27	NA	108685561	108696048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.5	chr9	+	2972	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	-4	392	-4	-392	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3146	False	NA	4	True	AATAAA	-15	NA	108685562	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.6	chr9	+	3265	13	NNC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-2	-391	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	24.5870053754688	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3153	False	NA	5	True	AATAAA	-16	NA	108685569	108695652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108690208_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.7	chr9	+	4712	9	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	-2	-391	intron_retention	FALSE	canonical	3	73	junction_7	6.44204936336256	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3153	False	NA	5	True	AATAAA	-16	NA	108685569	108695652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108691319_108691463_108691768_108691865_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.8	chr9	+	3179	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-391	intron_retention	FALSE	canonical	1	1	junction_1	24.9554975807763	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTTCCCTGTATGAT	3155	False	NA	5	True	AATAAA	-16	NA	108685571	108695652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685820_108688244_108688355_108688747_108688953_108689077_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36170.9	chr9	+	2472	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-392	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	23.3436419573877	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTTCCCTGTATGA	3155	False	NA	4	True	AATAAA	-15	NA	108685571	108695651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ES.36171.1	chr9	-	2175	2	FSM	ENSMUSG00000103785.2	ENSMUST00000193519.2	634	2	-20	-1521	-20	1389	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	108702038	108699747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108701565_108701680
ES.36172.1	chr9	+	5748	10	NNC	ENSMUSG00000023473.14	novel	11571	36	NA	NA	-113	-541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCCGCCTCTACTTTAT	NA	False	NA	NA	False	NA	NA	NA	108703405	108713231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108707240_108708876_108709528_108709886_108710113_108710363_108710480_108710851_108710941_108711052_108711211_108711747_108711912_108712232_108712326_108712419_108712590_108712984
ES.36172.2	chr9	+	6717	30	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	7565	2	-587	-2	3prime_fragment	TRUE	canonical	0	0	junction_1	3.22298522635805	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGTTCCTCTTTCTGTC	NA	False	NA	7	True	AATAAA	-14	NA	108711083	108730166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108711211_108711747_108711912_108712199_108712326_108712419_108712590_108712984_108713171_108713728_108713846_108714190_108714363_108714515_108714658_108714753_108714875_108715165_108715350_108715662_108715765_108717198_108717294_108717490_108717701_108717953_108718150_108718390_108718547_108718880_108719053_108719691_108719860_108720072_108720200_108720292_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722243_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
ES.36172.3	chr9	+	3992	19	NIC	ENSMUSG00000023473.14	novel	11571	36	NA	NA	4063	-1428	intron_retention	FALSE	canonical	0	0	junction_1	3.41248615065249	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGAGAGATATGCTTA	NA	False	NA	NA	False	GGGGCT	-34	NA	108715733	108728740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108715765_108717198_108717294_108717490_108717701_108717953_108718150_108718390_108718547_108718880_108719053_108719691_108719860_108720072_108720200_108720292_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722240_108722368_108722900_108723018_108723112_108723262_108723518_108724066_108724743_108724945_108725794_108726675_108728499
ES.36172.4	chr9	+	4926	16	NIC	ENSMUSG00000023473.14	novel	11547	35	NA	NA	-2143	-2	intron_retention	FALSE	canonical	0	0	junction_5	3.49984126624178	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGTTCCTCTTTCTGTC	NA	False	NA	7	True	AATAAA	-14	NA	108717664	108730166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108717701_108717953_108718150_108718390_108718547_108718880_108719053_108719691_108720200_108720292_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
ES.36172.5	chr9	+	4472	15	NIC	ENSMUSG00000023473.14	novel	11571	36	NA	NA	-1365	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.68740271404009	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTGTTCCTCTTTC	NA	False	NA	3	True	AATAAA	-10	NA	108718442	108730162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108718547_108718880_108719053_108719691_108719860_108720072_108720200_108720292_108720500_108720742_108720918_108721124_108721238_108722240_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
ES.36172.7	chr9	+	3944	11	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	17051	6	118	-6	3prime_fragment	FALSE	canonical	0	0	junction_3	3.22645316098034	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTTGTTCCTCTTTC	NA	False	NA	3	True	AATAAA	-10	NA	108720569	108730162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108720918_108721124_108721238_108721661_108721742_108722243_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
ES.36173.10	chr9	+	4494	19	NIC	ENSMUSG00000023259.18	novel	4943	20	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_5	11.4837512690704	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCAGGCTCTGCTGTGG	NA	False	NA	12	True	AATAAA	-12	NA	108731261	108742110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734250_108734390_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.12	chr9	+	3314	20	NNC	ENSMUSG00000023259.18	novel	2659	21	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_6	12.7783143864735	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTCTGCTGTGGCA	NA	False	NA	14	True	AATAAA	-14	NA	108731264	108742112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108732016_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734250_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.13	chr9	+	3030	18	FSM	ENSMUSG00000023259.18	ENSMUST00000193291.7	3046	18	24	-8	-7	8	multi-exon	FALSE	canonical	3	10	junction_1	8.63965269069984	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTACAGTGCGTTGAA	NA	False	NA	NA	False	NA	NA	NA	108731265	108739671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280
ES.36173.14	chr9	+	2580	21	NNC	ENSMUSG00000023259.18	novel	2659	21	NA	NA	23	-17	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	10.09405765785	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAGCTTTGGGAATAAA	NA	False	NA	-19	True	NA	NA	NA	108731918	108742079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108732016_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.2	chr9	+	3318	21	FSM	ENSMUSG00000023259.18	ENSMUST00000239562.1	2659	21	-659	0	1	0	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCTGTGGCATGGTC	NA	False	NA	19	True	AATAAA	-19	NA	108731236	108742117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.3	chr9	+	3553	19	NNC	ENSMUSG00000023259.18	novel	4943	20	NA	NA	1	0	intron_retention	TRUE	canonical	3	8	junction_1	10.4880884817015	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCAGGCTCTGCTGTGG	NA	False	NA	12	True	AATAAA	-12	NA	108731236	108742110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108732016_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.4	chr9	+	4200	20	NIC	ENSMUSG00000023259.18	novel	2514	21	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	11.1873989263297	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGCTCTGCTGTGGCA	NA	False	NA	14	True	AATAAA	-14	NA	108731236	108742112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734250_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.5	chr9	+	4480	19	NIC	ENSMUSG00000023259.18	novel	4943	20	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_1	7.90139853224934	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCAGGCTCTGCTGTGG	NA	False	NA	12	True	AATAAA	-12	NA	108731242	108742110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108733142_108733221_108733362_108733530_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.6	chr9	+	2642	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	-76	-14	-15	0	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCAGGCTCTGCTGTGG	NA	False	NA	12	True	AATAAA	-12	NA	108731257	108742110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.7	chr9	+	4231	20	NNC	ENSMUSG00000023259.18	novel	4943	20	NA	NA	-15	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	11.5997420928441	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCAGGCTCTGCTGTGGC	NA	False	NA	13	True	AATAAA	-13	NA	108731257	108742111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108733142_108733221_108733362_108733530_108733642_108733876_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36173.9	chr9	+	3272	21	NNC	ENSMUSG00000023259.18	novel	2659	21	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	14.1013297245331	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTCAGGCTCTGCTGT	NA	False	NA	10	True	AATAAA	-10	NA	108731260	108742108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734148_108734305_108734394_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ES.36174.1	chr9	-	178	1	Intergenic	novelGene_29422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAATAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	108761366	108761188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108761200_108761400
ES.36175.1	chr9	-	183	1	Intergenic	novelGene_29423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGCATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108762003	108761820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108761800_108762000
ES.36176.1	chr9	+	1697	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	-27	-17	-27	17	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGGCATGGAGTCCAT	NA	False	NA	35	True	AATAAA	-31	NA	108765673	108778708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.10	chr9	+	1493	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1711.10122719909	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765752	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773173_108773794_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.11	chr9	+	3491	10	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-27	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	1950.74525803048	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765754	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766087_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.13	chr9	+	1315	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1855.55140322223	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765757	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.14	chr9	+	5526	6	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-22	0	intron_retention	FALSE	canonical	3	5936	junction_4	140.674091431223	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765759	108778691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108773957_108774427_108774508_108776005_108776122_108776403
ES.36176.15	chr9	+	2291	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-21	0	intron_retention	FALSE	canonical	3	5755	junction_3	210.501876476197	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765760	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.16	chr9	+	2829	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	5755	junction_3	192.948786922852	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765760	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108777702_108778006
ES.36176.17	chr9	+	1583	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1704.28320506175	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765760	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776671_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.19	chr9	+	3607	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-21	0	intron_retention	FALSE	canonical	3	5755	junction_3	196.647629022066	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765760	108778691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.2	chr9	+	5334	6	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	40	-2	intron_retention	FALSE	canonical	3	5755	junction_3	175.348110910839	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765740	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108776122_108776403_108777702_108778006
ES.36176.20	chr9	+	1644	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	-2	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	1708.90399208577	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765761	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773703_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.22	chr9	+	2924	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	5755	junction_3	182.213773834472	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765761	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108774508_108776005_108776122_108776403_108777702_108778006_108778083_108778502
ES.36176.23	chr9	+	5427	5	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	0	intron_retention	FALSE	canonical	3	5755	junction_3	212.655825220002	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765761	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427
ES.36176.24	chr9	+	7184	5	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	6039	junction_1	187.78628144782	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765761	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108773957_108774427_108776548_108776665
ES.36176.26	chr9	+	2106	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	5755	junction_3	199.580054983226	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765761	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.27	chr9	+	4494	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	5755	junction_3	208.983514601033	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765762	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.30	chr9	+	1333	11	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1876.11121472049	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765762	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765806_108773089_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.31	chr9	+	1448	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	1	64	junction_1	1770.99513977988	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765762	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.32	chr9	+	5176	6	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_4	2422.74533535822	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765762	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108777195_108777612_108777702_108778006
ES.36176.33	chr9	+	1580	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1720.47177799837	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765762	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773118_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.35	chr9	+	3983	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	5755	junction_3	215.491299128294	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765762	108778690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108776548_108776665_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.36	chr9	+	1591	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1714.2117458827	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765764	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776917_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.37	chr9	+	1570	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1710.52240842446	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765766	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778021_108778083_108778502
ES.36176.38	chr9	+	2186	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	196.651640645572	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777702_108778006_108778083_108778502
ES.36176.39	chr9	+	3219	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_2	2316.07822262836	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108767202_108767341_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.42	chr9	+	3501	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	199.708913171145	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.43	chr9	+	4601	7	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	208.861995904792	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108777702_108778006
ES.36176.44	chr9	+	3082	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	5755	junction_3	190.443675107444	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765768	108778690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.45	chr9	+	1561	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1711.10122719909	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765768	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773222_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.46	chr9	+	2519	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	209.197251415978	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.48	chr9	+	1580	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1716.94211989093	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766229_108771158_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.49	chr9	+	1665	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	1708.58941983016	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765938_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.5	chr9	+	1019	2	ISM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	41	11703	-40	-6503	5prime_fragment	FALSE	canonical	3	6039	junction_1	0	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	108765741	108766988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108765856_108766083
ES.36176.50	chr9	+	2121	11	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	186.423308628508	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.52	chr9	+	1565	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1711.10122719909	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773775_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.53	chr9	+	2839	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	68	-1254	-13	1254	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCTTCATTTACATT	NA	False	NA	NA	False	NA	NA	NA	108765768	108779945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.55	chr9	+	2401	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	183.379455477864	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108777702_108778006_108778083_108778502
ES.36176.56	chr9	+	3122	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	211.259421588427	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777702_108778006
ES.36176.57	chr9	+	7042	5	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	6039	junction_1	106.692021726088	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765768	108778690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108777702_108778006_108778083_108778502
ES.36176.58	chr9	+	4713	8	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	226.278499163472	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAACTGTGTTGTCCTTC	NA	False	NA	12	True	AATAAA	-8	NA	108765768	108778685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108776122_108776403_108776548_108776665_108777702_108778006
ES.36176.59	chr9	+	4122	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	16	intron_retention	FALSE	canonical	3	5755	junction_3	204.297229606011	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGGCATGGAGTCCA	NA	False	NA	34	True	AATAAA	-30	NA	108765768	108778707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777702_108778006
ES.36176.60	chr9	+	4386	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	5755	junction_3	212.547641718275	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765768	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776548_108776665_108776827_108776923_108777702_108778006
ES.36176.61	chr9	+	3600	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	5755	junction_3	210.50808611782	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765768	108778691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108777010_108777612_108777702_108778006
ES.36176.62	chr9	+	3125	8	ISM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	68	3	-13	1	intron_retention	FALSE	canonical	3	5755	junction_3	188.439997487426	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGTTGTCCTTCCTT	NA	False	NA	15	True	AATAAA	-11	NA	108765768	108778688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403
ES.36176.63	chr9	+	1497	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1714.2117458827	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765771	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776754_108776933_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.65	chr9	+	4615	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-9	1	intron_retention	FALSE	canonical	3	5755	junction_3	211.921528814323	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGTTGTCCTTCCTT	NA	False	NA	15	True	AATAAA	-11	NA	108765772	108778688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777702_108778006
ES.36176.66	chr9	+	1670	14	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2231.41605211425	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765772	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778204_108778298_108778502
ES.36176.67	chr9	+	1882	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	5755	junction_3	198.366636090976	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765772	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108778083_108778502
ES.36176.68	chr9	+	7457	4	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	6039	junction_1	121.749287015937	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765772	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108777702_108778006
ES.36176.69	chr9	+	3896	9	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-9	1	intron_retention	FALSE	canonical	3	5755	junction_3	191.915834417069	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGTTGTCCTTCCTT	NA	False	NA	15	True	AATAAA	-11	NA	108765772	108778688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.7	chr9	+	2029	12	ISM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	43	1	-38	-1	intron_retention	FALSE	canonical	3	5755	junction_3	203.476073278148	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765743	108778690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.70	chr9	+	2627	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1718.99061750073	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTCCTTCCTTAGAA	NA	False	NA	19	True	AATAAA	-15	NA	108765774	108778692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108775555_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.71	chr9	+	1571	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1720.47177799837	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765774	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771233_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.72	chr9	+	1568	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1714.41749704285	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765775	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778077_108778502
ES.36176.73	chr9	+	4312	8	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	5755	junction_3	195.28545302522	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765775	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108777702_108778006
ES.36176.74	chr9	+	1523	13	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1704.28320506175	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765775	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776716_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.75	chr9	+	3419	11	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_3	1875.151033917	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGTTGTCCTTCCTT	NA	False	NA	15	True	AATAAA	-11	NA	108765775	108778688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773185_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.76	chr9	+	3776	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	5755	junction_3	205.612784826116	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765775	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.78	chr9	+	5464	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	6039	junction_1	145.955937880133	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765776	108778691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36176.79	chr9	+	5808	4	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	5755	junction_2	226.218674933987	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCCTTCCTTAG	NA	False	NA	17	True	AATAAA	-13	NA	108765777	108778690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108766225_108771151_108771239_108773111_108777702_108778006
ES.36176.8	chr9	+	3924	10	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-35	-2	intron_retention	FALSE	canonical	3	5755	junction_3	201.858586364041	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765746	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108778083_108778502
ES.36176.80	chr9	+	3543	12	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_9	2386.6862188897	1876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGTTGTCCTTCCT	NA	False	NA	14	True	AATAAA	-10	NA	108765779	108778687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777139_108777195_108777612_108777702_108778006
ES.36176.81	chr9	+	6159	8	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	6039	junction_1	149.553485074602	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108765781	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108765856_108766083_108766225_108771151_108773957_108774427_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006
ES.36176.82	chr9	+	4892	6	ISM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	81	3	0	1	intron_retention	FALSE	canonical	3	5755	junction_3	212.520681346546	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGTTGTCCTTCCTT	NA	False	NA	15	True	AATAAA	-11	NA	108765781	108778688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427
ES.36176.83	chr9	+	4688	9	NNC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	2056.63262017673	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765781	108778691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108765856_108766083_108766225_108771151_108773957_108774427_108774508_108776005_108776122_108776401_108776548_108776665_108776827_108776923_108777010_108777612
ES.36176.84	chr9	+	6136	2	ISM	ENSMUSG00000025651.15	ENSMUST00000193332.2	2473	4	-2961	-2	1082	-2	intron_retention	FALSE	canonical	3	6057	junction_1	0	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108772271	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108776122_108776403
ES.36176.85	chr9	+	3722	7	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	1953	-2	intron_retention	FALSE	canonical	3	6057	junction_1	134.392150068373	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTGTCCTTCCTTA	NA	False	NA	16	True	AATAAA	-12	NA	108773142	108778689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ES.36177.1	chr9	+	9272	119	FSM	ENSMUSG00000025650.14	ENSMUST00000112070.8	9250	119	-22	0	-22	0	multi-exon	TRUE	canonical	0	0	junction_1	1.20386717675117	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTGTTGATTGTTTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	108782631	108813943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108782705_108782811_108782901_108783397_108783579_108784262_108784423_108784510_108784605_108784696_108784859_108784959_108785124_108785197_108785328_108785429_108785547_108785628_108785776_108785860_108785978_108786054_108786205_108786281_108786411_108787159_108787304_108787391_108787518_108787630_108787775_108788304_108788425_108788558_108788703_108789003_108789130_108789232_108789380_108789581_108789705_108790019_108790167_108790413_108790549_108790622_108790770_108790847_108790985_108791224_108791352_108791433_108791581_108791667_108791841_108791932_108791969_108792052_108792080_108792170_108792216_108792285_108792349_108792955_108793028_108793117_108793154_108793288_108793325_108793480_108793553_108793654_108793733_108794117_108794145_108794225_108794280_108794368_108794432_108794505_108794566_108794646_108794683_108794878_108794924_108794994_108795031_108795370_108795416_108795503_108795540_108795639_108795673_108796061_108796095_108796239_108796294_108796372_108796433_108796525_108796562_108796672_108796754_108796838_108796875_108797073_108797119_108797371_108797444_108797662_108797708_108797944_108797972_108798168_108798199_108798329_108798402_108798490_108798527_108798601_108798638_108798726_108798808_108799018_108799055_108799422_108799486_108799569_108799615_108800520_108800557_108800626_108800663_108800769_108800866_108800979_108801016_108801106_108801143_108801260_108801309_108801594_108801631_108801757_108801881_108801966_108802168_108802259_108802296_108802374_108802429_108802576_108802646_108802719_108802765_108802880_108802944_108803132_108803178_108803488_108803525_108803640_108803677_108803831_108803877_108803990_108804024_108804096_108804160_108804277_108804314_108804393_108804475_108804600_108804670_108804790_108804827_108804893_108804936_108805104_108805150_108805238_108805284_108806147_108806184_108806266_108806327_108806432_108806541_108806710_108806783_108806888_108806925_108807020_108807081_108807185_108807231_108807417_108807454_108807565_108807602_108807678_108807736_108807888_108807961_108808281_108808354_108808562_108808599_108808866_108808948_108809274_108809329_108809592_108809647_108809723_108809787_108810129_108810193_108810295_108810413_108811367_108811446_108811537_108811592_108811741_108811791_108812401_108812435_108812586_108812674_108812856_108812986_108813085_108813281_108813569
ES.36178.1	chr9	+	3300	14	NNC	ENSMUSG00000025648.19	novel	811	7	NA	NA	-3557	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	5.49663694921534	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	8890	False	NA	NA	False	AATAAA	-7	NA	108817288	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108817469_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839723_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.10	chr9	+	3978	15	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.40077469877598	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	AATAAA	-32	NA	108821029	108861290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840576_108853722_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.11	chr9	+	3336	15	NNC	ENSMUSG00000025648.19	novel	1712	14	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4.90158241837079	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	108821029	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854198_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.12	chr9	+	3355	15	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	4.23300925429402	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	108821032	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.13	chr9	+	3397	15	NNC	ENSMUSG00000025648.19	novel	1751	14	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.36665821607481	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	AATAAA	-32	NA	108821032	108861290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827909_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.15	chr9	+	312	1	Intergenic	novelGene_29424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAAG	1438	False	NA	NA	False	NA	NA	NA	108833290	108833602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108833300_108833600
ES.36178.16	chr9	+	2246	5	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	9357	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.8949130612758	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	173	False	NA	NA	False	AATAAA	-7	NA	108855804	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108855924_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.17	chr9	+	1901	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	-25	-42	-5	-11	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAACTATTTCTGTCT	NA	False	NA	60	True	NA	NA	NA	108867627	108886834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ES.36178.19	chr9	+	1047	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	5	782	5	-13	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCACGTCACCCCAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	108867657	108886010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ES.36178.2	chr9	+	3082	19	Fusion	ENSMUSG00000025648.19_ENSMUSG00000025647.17	novel	811	7	NA	NA	-3466	1	multi-exon	FALSE	canonical	0	0	junction_14	91.4682701511538	175	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTTCTTCAGCGCCTA	8981	False	NA	19	True	AATAAA	-19	NA	108817379	108886793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_108817469_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ES.36178.21	chr9	+	2015	5	FSM	ENSMUSG00000025647.17	ENSMUST00000198639.2	2010	5	-11	6	6	-6	multi-exon	FALSE	canonical	3	153	junction_2	33.0302891298275	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTTCCCCTTTCTTCA	NA	False	NA	12	True	AATAAA	-12	NA	108867658	108886786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885574_108885717
ES.36178.22	chr9	+	1527	4	FSM	ENSMUSG00000025647.17	ENSMUST00000198591.5	515	4	4	-1016	4	-6	multi-exon	FALSE	canonical	0	0	junction_1	122.37192851667	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTTCCCCTTTCTTCA	NA	False	NA	12	True	AATAAA	-12	NA	108881925	108886786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108882049_108885045_108885162_108885354_108885574_108885717
ES.36178.23	chr9	+	1559	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	-5	-516	-5	-1	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTTTCTTCAGCGCC	NA	False	NA	17	True	AATAAA	-17	NA	108883925	108886791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
ES.36178.3	chr9	+	3535	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	-50	3	-50	-3	multi-exon	FALSE	canonical	3	8	junction_7	3.73057097014835	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTAATATGAGGTGGT	NA	False	NA	NA	False	AATAAA	-35	NA	108820795	108861293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.4	chr9	+	5817	14	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	-3	-3	intron_retention	FALSE	canonical	2	6	junction_8	3.79036461377074	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGTAATATGAGGTGGT	NA	False	NA	NA	False	AATAAA	-35	NA	108820966	108861293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.5	chr9	+	3583	17	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.53326822884228	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	108821012	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108825637_108825772_108827612_108827687_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.6	chr9	+	3331	14	FSM	ENSMUSG00000025648.19	ENSMUST00000196249.5	1751	14	-70	-1510	-2	-6	multi-exon	FALSE	canonical	0	0	junction_1	5.14637805651622	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	AATAAA	-32	NA	108821013	108861290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108821181_108827909_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.7	chr9	+	5033	14	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	9	-6	intron_retention	FALSE	canonical	2	6	junction_7	4.38798790675436	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	AATAAA	-32	NA	108821024	108861290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.8	chr9	+	3171	13	NIC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	4.85555237731907	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	False	NA	NA	False	AATAAA	-7	NA	108821026	108861265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36178.9	chr9	+	3210	14	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.14637805651622	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAGTAATATGAGGT	NA	False	NA	NA	False	AATAAA	-32	NA	108821027	108861290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108821137_108827972_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ES.36179.1	chr9	+	253	1	Antisense	novelGene_ENSMUSG00000025646.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTACATATATATAATC	NA	False	NA	NA	False	NA	NA	NA	108890889	108891142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_108890900_108891100
ES.3618.1	chr10	+	5532	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	-4	2	-4	-2	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTCAGAGCCCATC	NA	False	NA	8	True	AATAAA	-23	NA	94350714	94426816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
ES.3618.2	chr10	+	3374	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	4	2152	4	3	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGGAAGAGAGAGACATG	NA	False	NA	NA	False	NA	NA	NA	94350722	94424666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
ES.36180.1	chr9	+	175	1	Intergenic	novelGene_29426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108899976	108900151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108900000_108900200
ES.36181.1	chr9	-	228	1	Intergenic	novelGene_29425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTGTAAACTCTTAT	1772	False	NA	NA	False	ATTAAA	-12	NA	108853531	108853303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108853300_108853500
ES.36182.1	chr9	-	2411	1	Antisense	novelGene_ENSMUSG00000025647.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTCGCATGGTCCGTTG	NA	False	NA	NA	False	NA	NA	NA	108886561	108884150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_108884200_108886600
ES.36182.10	chr9	-	4010	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	19	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	47.1748604197331	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGACTGCTTGCCGCC	NA	False	NA	-7	True	AATAAA	-10	NA	108903169	108887008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894280_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.11	chr9	-	4039	14	NNC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_12	57.4897984261288	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGACTGCTTGCCGCC	NA	False	NA	-7	True	AATAAA	-10	NA	108903192	108887008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890267_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900881_108901674_108901806_108902822
ES.36182.12	chr9	-	5961	11	NNC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	10	1	intron_retention	FALSE	canonical	1	2	junction_10	58.5781529241064	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTCCTGAGTCCGAT	NA	False	NA	2	True	ATTAAA	-27	NA	108903178	108888813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889549_108890177_108890270_108890599_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902766
ES.36182.13	chr9	-	6410	11	NIC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	17	0	intron_retention	FALSE	canonical	3	123	junction_2	15.9125736447628	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	1	True	ATTAAA	-26	NA	108903171	108888814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108888977_108889330_108889581_108889696_108890270_108890599_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.14	chr9	-	5996	12	NIC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	123	junction_2	15.1766458254911	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	1	True	ATTAAA	-26	NA	108903157	108888814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.15	chr9	-	2568	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	2	2	-2	-2	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903190	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.16	chr9	-	2466	13	FSM	ENSMUSG00000025646.10	ENSMUST00000160217.8	4248	13	-34	1816	15	-2	multi-exon	FALSE	canonical	3	16	junction_5	38.4544282957835	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903173	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894280_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.17	chr9	-	2010	11	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	-1883	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	56.0257976293065	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108900470	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890267_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900355
ES.36182.18	chr9	-	2322	12	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	56.2482690275447	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903178	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108898346_108898466_108900785_108900881_108901674_108901806_108902822
ES.36182.2	chr9	-	2463	2	FSM	ENSMUSG00000049734.10	ENSMUST00000112053.2	1054	2	-494	-915	-11	910	multi-exon	FALSE	canonical	3	24	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCTCTGTACCCGCAAA	NA	False	NA	NA	False	AATAAA	-34	NA	108888813	108886090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108887997_108888256
ES.36182.20	chr9	-	2383	12	NIC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	43.9278145661947	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903142	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.21	chr9	-	2366	12	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	55.7110312978001	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903178	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889549_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.22	chr9	-	2636	13	ISM	ENSMUSG00000025646.10	ENSMUST00000160928.5	4215	14	26	1813	-23	-2	5prime_fragment	FALSE	canonical	0	0	junction_12	41.7940552657379	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903162	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902726
ES.36182.23	chr9	-	2359	12	NNC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	64.5273982426608	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903173	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889549_108890177_108890267_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900881_108901674_108901806_108902822
ES.36182.24	chr9	-	2620	13	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	41.2737305478113	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903186	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902766
ES.36182.25	chr9	-	2477	13	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.4188596057335	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTGTTTCCTGAGTCC	NA	False	NA	-1	True	ATTAAA	-24	NA	108903173	108888816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896189_108896820_108896979_108898346_108898466_108900785_108900881_108901674_108901806_108902822
ES.36182.26	chr9	-	2564	13	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	40.9101318610548	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTTGTTTCCTGAGT	NA	False	NA	-3	True	ATTAAA	-22	NA	108903147	108888818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889549_108889623_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.27	chr9	-	7214	8	NNC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	15	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	51.5779576397293	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTTGTTTCCTGAGT	NA	False	NA	-3	True	ATTAAA	-22	NA	108903173	108888818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108894868_108895033_108895161_108896078_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.28	chr9	-	2434	13	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	41.7940552657379	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTTGTTTCCTGAGT	NA	False	NA	-3	True	ATTAAA	-22	NA	108903157	108888818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902921
ES.36182.29	chr9	-	2446	13	NNC	ENSMUSG00000025646.10	novel	2572	13	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.1922682490525	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTTGTTTCCTGAGT	NA	False	NA	-3	True	ATTAAA	-22	NA	108903187	108888818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894751_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.3	chr9	-	4332	13	FSM	ENSMUSG00000049734.10_ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	51	-1811	-2	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTTGCCGCCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	108903141	108887003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.30	chr9	-	3180	8	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	-37	3978	-18	-3102	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCCCATTCTGTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	108903157	108892830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.31	chr9	-	3046	8	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	-46	4121	22	-3245	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTGACTAGTTTTAC	NA	False	NA	NA	False	NA	NA	NA	108903166	108892973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.32	chr9	-	2738	8	ISM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	2	4491	-2	3227	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAGTTCCTAATTTGGG	NA	False	NA	NA	False	AAGAAA	-3	NA	108903190	108893305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.33	chr9	-	2777	8	NNC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	15	3227	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	50.2300828636565	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAGTTCCTAATTTGGG	NA	False	NA	NA	False	AAGAAA	-3	NA	108903173	108893305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902766
ES.36182.34	chr9	-	4897	6	NIC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	1	3227	intron_retention	FALSE	canonical	2	5	junction_3	58.2594198391985	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAGTTCCTAATTTGGG	NA	False	NA	NA	False	AAGAAA	-3	NA	108903187	108893305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108894868_108895033_108895161_108896084_108896187_108898346_108900957_108901674_108901806_108902822
ES.36182.35	chr9	-	2724	8	NNC	ENSMUSG00000025646.10	novel	2381	12	NA	NA	1	3222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	52.0796093906791	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTATAAGTTCCTAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	108903187	108893310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108894868_108895033_108895161_108896084_108896181_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.36	chr9	-	3509	5	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	3205	4462	-1328	3218	internal_fragment	FALSE	canonical	3	146	junction_3	2.6809513236909	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGTATAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	108899915	108893314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346
ES.36182.37	chr9	-	2267	8	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	-44	4898	24	2782	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTGTCCTGGAACTC	NA	False	NA	NA	False	NA	NA	NA	108903164	108893750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.38	chr9	-	1891	8	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	-53	5283	15	2397	5prime_fragment	FALSE	canonical	3	126	junction_6	12.2407816210354	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGGCTTTTGCACTT	NA	False	NA	NA	False	NA	NA	NA	108903173	108894135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.4	chr9	-	4117	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.9887555902104	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGCCGCCTCTG	NA	False	NA	-3	True	AATAAA	-14	NA	108903187	108887004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.6	chr9	-	3363	13	NIC	ENSMUSG00000025646.10	novel	4248	13	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	60.3107692612927	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	False	NA	-4	True	AATAAA	-13	NA	108903135	108887005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108887997_108888714_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894280_108894868_108895033_108895161_108896084_108896187_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36182.7	chr9	-	4229	15	NNC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	61.5376523200327	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	False	NA	-4	True	AATAAA	-13	NA	108903173	108887005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108887997_108888256_108888983_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900355_108900477_108900785_108900957_108901674_108901806_108902822
ES.36182.9	chr9	-	4124	14	NNC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.8376061047129	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTGCTTGCCGCCTC	NA	False	NA	-5	True	AATAAA	-12	NA	108903177	108887006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896206_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ES.36183.1	chr9	-	791	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	152	1	-57	-1	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGGGGTTGCCATGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	108911503	108906955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ES.36183.2	chr9	-	711	3	NIC	ENSMUSG00000091537.3	novel	944	4	NA	NA	5	-100	intron_retention	FALSE	canonical	3	4656	junction_2	594.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTTGTGTGTGCTTGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	108911441	108907054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108907494_108911069_108911295_108911394
ES.36183.3	chr9	-	655	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	-2	-102	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	2644.1756119189	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCATTTGTGTGTGCTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	108911448	108907056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108907494_108911069_108911158_108911238_108911315_108911394
ES.36183.4	chr9	-	633	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	102	0	-102	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCATTTGTGTGTGCTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	108911446	108907056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ES.36183.6	chr9	-	573	3	FSM	ENSMUSG00000091537.3	ENSMUST00000193868.2	380	3	-2	-191	-2	-108	multi-exon	FALSE	canonical	3	59	junction_2	2893	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTATCATTTGTGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	108911448	108907062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108907494_108911069_108911158_108911394
ES.36183.7	chr9	-	553	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	152	239	-57	60	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGTTCAGCAATTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	108911503	108907193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ES.36183.8	chr9	-	530	3	NIC	ENSMUSG00000091537.3	novel	380	3	NA	NA	0	13	intron_retention	FALSE	canonical	3	4656	junction_2	594.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATGAATA	NA	False	NA	NA	False	AATAAA	-8	NA	108911446	108907240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_108907494_108911069_108911295_108911394
ES.36183.9	chr9	-	430	4	NNC	ENSMUSG00000091537.3	novel	944	4	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	2344.67003127424	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATGAATA	NA	False	NA	NA	False	AATAAA	-8	NA	108911433	108907240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_108907488_108911069_108911158_108911238_108911295_108911394
ES.36184.1	chr9	+	1539	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	1	-14	1	14	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTTTTATCATTGATT	NA	False	NA	28	True	ATTAAA	-42	NA	108911561	108921571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
ES.36184.2	chr9	+	517	1	NIC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	4	-9476	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAGAGA	NA	False	NA	NA	False	NA	NA	NA	108911564	108912081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108911600_108912100
ES.36184.3	chr9	+	1434	4	NNC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	34.4705993887867	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAGTTATATCAGAC	NA	False	NA	10	True	ATTAAA	-24	NA	108911567	108921553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108911636_108918404_108918716_108919908_108919993_108920582
ES.36184.4	chr9	+	1556	5	NNC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0060971076254	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTATATCAGACTCAGT	NA	False	NA	15	True	ATTAAA	-29	NA	108911591	108921558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108911636_108916902_108916963_108918404_108918716_108919908_108920074_108920582
ES.36184.5	chr9	+	3256	3	ISM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	5045	-6	5045	6	3prime_fragment	FALSE	canonical	3	81	junction_1	1	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAGACTCAGTTTTAT	1952	False	NA	20	True	ATTAAA	-34	NA	108916605	108921563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108918716_108919908_108920074_108920582
ES.36184.6	chr9	+	3897	1	NIC	ENSMUSG00000025645.9	novel	1526	4	NA	NA	6096	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAGTTATATCAGAC	3003	False	NA	10	True	ATTAAA	-24	NA	108917656	108921553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_108917700_108921600
ES.36185.1	chr9	+	8466	38	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-596	-8	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	5.06524270995357	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGAAGCTAAGTCTTCA	9207	False	NA	NA	False	AATAAA	-16	NA	108923860	108948977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.10	chr9	+	7692	38	NNC	ENSMUSG00000053646.14	novel	8649	38	NA	NA	-9	-938	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	5.37029135321424	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCTCAGGTCCATGAC	9794	False	NA	NA	False	ATTAAA	-17	NA	108924447	108948047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108924714_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934449_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.11	chr9	+	8473	38	FSM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	168	8	168	-8	multi-exon	FALSE	canonical	2	3	junction_1	4.99948865171935	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGAAGCTAAGTCTTCA	9971	False	NA	NA	False	AATAAA	-16	NA	108924624	108948977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108924714_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.12	chr9	+	6627	36	NNC	ENSMUSG00000053646.14	novel	8649	38	NA	NA	3687	-1282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.68391931465518	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGACTCACCAGCCCC	2850	False	NA	NA	False	ATTAAA	-12	NA	108929464	108947703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934379_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942894_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.13	chr9	+	6500	36	NNC	ENSMUSG00000053646.14	novel	8649	38	NA	NA	3893	-1280	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	5.0536711247107	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACTCACCAGCCCCTC	3056	False	NA	NA	False	ATTAAA	-14	NA	108929670	108947705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934449_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.14	chr9	+	4686	27	ISM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	10201	945	89	-945	3prime_fragment	FALSE	canonical	2	6	junction_5	4.26298920044104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTGTGGGTCTCAGGT	8043	False	NA	NA	False	ATTAAA	-10	NA	108934657	108948040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.15	chr9	+	3591	14	NNC	ENSMUSG00000053646.14	novel	8649	38	NA	NA	4853	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.86837880700328	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGAAGCTAAGTCTTC	3664	False	NA	NA	False	AATAAA	-15	NA	108940714	108948976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108940788_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.16	chr9	+	3830	14	ISM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	16289	-116	4884	116	3prime_fragment	FALSE	canonical	2	13	junction_5	3.15103063819447	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTCTCTCCCCCTTT	3695	False	NA	NA	False	AATATA	-20	NA	108940745	108949101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.2	chr9	+	7531	38	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-593	-940	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.06524270995357	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGTCTCAGGTCCATG	9210	False	NA	NA	False	ATTAAA	-15	NA	108923863	108948045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.5	chr9	+	7167	38	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-563	-1274	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5.06524270995357	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACCAGCCCCTCTGCTAA	9240	False	NA	NA	False	ATTAAA	-20	NA	108923893	108947711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.6	chr9	+	7813	38	NNC	ENSMUSG00000053646.14	novel	651	5	NA	NA	-547	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	6.07585360901324	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAGGAAGCTAAGTCT	9256	False	NA	NA	False	AATAAA	-13	NA	108923909	108948974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932842_108933095_108933205_108933290_108933400_108934378_108934449_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36185.7	chr9	+	4448	21	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-546	1017	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.3692104549907	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGGTAGTGTGGTACA	9257	False	NA	NA	False	AGTAAA	-18	NA	108923910	108938996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557
ES.36185.8	chr9	+	8079	39	NNC	ENSMUSG00000053646.14	novel	799	6	NA	NA	-546	397	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.26542418086796	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTATGAGACAGGGATT	9257	False	NA	NA	False	NA	NA	NA	108923910	108949382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_108923943_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108934153_108934449_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907_108948991_108949352
ES.36185.9	chr9	+	7439	38	FSM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	-63	1273	-63	-1273	multi-exon	FALSE	canonical	2	3	junction_1	4.99948865171935	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGCCCCTCTGCTAAG	9740	False	NA	NA	False	ATTAAA	-21	NA	108924393	108947712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_108924714_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ES.36186.1	chr9	+	1287	2	Intergenic	novelGene_29427	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTTGTACAACTCTGC	7772	False	NA	NA	False	AATAAA	-14	NA	108953155	108954974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_108954259_108954790
ES.36187.1	chr9	-	186	1	Intergenic	novelGene_29428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	108956763	108956577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_108956600_108956800
ES.36188.1	chr9	+	552	5	Antisense	novelGene_ENSMUSG00000062275.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTCTCCTGCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	109454661	109463942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_109454824_109457193_109457244_109463012_109463103_109463584_109463640_109463747
ES.36189.1	chr9	+	176	1	Intergenic	novelGene_29429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTCAGGGTA	NA	False	NA	NA	False	NA	NA	NA	109473247	109473423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109473200_109473400
ES.3619.1	chr10	-	1186	1	Intergenic	novelGene_2760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCTCAGGATCTATGAC	NA	False	NA	NA	False	NA	NA	NA	94385281	94384095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94384100_94385300
ES.36190.1	chr9	+	178	1	Intergenic	novelGene_29430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	109653667	109653845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109653700_109653800
ES.36191.1	chr9	-	2593	1	FSM	ENSMUSG00000070282.7	ENSMUST00000133495.3	1008	1	-1352	-233	-27	35	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAACTAACGAAGAACC	NA	False	NA	NA	False	NA	NA	NA	109661801	109659208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109659200_109661800
ES.36192.1	chr9	+	1069	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	4	1	4	-1	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661829	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.10	chr9	+	1413	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.984359896939	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661850	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670764_109670809_109671156_109671519
ES.36192.11	chr9	+	1002	7	NIC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	233.901688749782	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCAGTACTCCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	109661850	109672030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109671029_109671156_109671519
ES.36192.12	chr9	+	3530	5	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	5	intron_retention	FALSE	non_canonical	0	0	junction_4	264.59438297137	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCAGTACTCCTGT	NA	False	NA	12	True	AATAAA	-19	NA	109661850	109672029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109670764_109670809
ES.36192.14	chr9	+	2479	8	NNC	ENSMUSG00000032478.15	novel	719	7	NA	NA	2	1684	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	239.835487833827	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGACCACATCAGATTT	NA	False	NA	NA	False	NA	NA	NA	109661856	109673868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661957_109662263_109662364_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519_109672368_109672833
ES.36192.15	chr9	+	1181	7	NNC	ENSMUSG00000032478.15	novel	719	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	215.187321497651	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661856	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661957_109662263_109662364_109664327_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.16	chr9	+	731	4	NIC	ENSMUSG00000032478.15	novel	930	6	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	73.0889868584864	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCAGTACTCCTGT	NA	False	NA	12	True	AATAAA	-19	NA	109661857	109672029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661876_109662263_109662364_109668675_109668779_109671519
ES.36192.17	chr9	+	1010	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200091.5	715	6	8	-303	7	6	multi-exon	FALSE	canonical	3	47	junction_2	202.945707025303	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCAGTACTCCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	109661861	109672030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109661957_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.18	chr9	+	816	4	NIC	ENSMUSG00000032478.15	novel	715	6	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	100.360461448831	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCCTGTGCAAGCTTT	NA	False	NA	21	True	AATAAA	-28	NA	109661862	109672038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661957_109662263_109662364_109668675_109668779_109671519
ES.36192.19	chr9	+	1103	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	48	-432	-10	5	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCAGTACTCCTGT	NA	False	NA	12	True	AATAAA	-19	NA	109661864	109672029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.2	chr9	+	1238	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	22	-541	0	-46	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTCTCGGCAGGTTGA	NA	False	NA	1	True	AGTAAA	-15	NA	109661838	109672138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.20	chr9	+	3605	5	NNC	ENSMUSG00000032478.15	novel	599	6	NA	NA	-8	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	257.005228546036	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661866	109672040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109670764_109670810
ES.36192.21	chr9	+	895	5	NIC	ENSMUSG00000032478.15	novel	599	6	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	245.714646490599	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCTGGCAGTACTCCT	NA	False	NA	10	True	AATAAA	-17	NA	109661869	109672027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109671519
ES.36192.22	chr9	+	1452	6	ISM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	75	-444	17	-1	intron_retention	FALSE	canonical	3	252	junction_1	130.300268610621	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661891	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994
ES.36192.23	chr9	+	1233	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	-56	-312	-44	-1	multi-exon	FALSE	canonical	3	493	junction_3	57.3431774494578	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109662053	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.24	chr9	+	3682	4	NNC	ENSMUSG00000032478.15	novel	409	4	NA	NA	-23	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	282.557762039709	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTCCAGGCTGGCAGTA	NA	False	NA	5	True	AATAAA	-12	NA	109662074	109672022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109662364_109664390_109664483_109668675_109670764_109670809
ES.36192.25	chr9	+	1090	5	NIC	ENSMUSG00000032478.15	novel	865	6	NA	NA	-16	5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	246.277663420782	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCAGTACTCCTGT	NA	False	NA	12	True	AATAAA	-19	NA	109662081	109672029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109662364_109664385_109664483_109670543_109670584_109670994_109671156_109671519
ES.36192.26	chr9	+	1055	7	NNC	ENSMUSG00000032478.15	novel	865	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	215.30908016152	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTCCAGGCTGGCAGTA	NA	False	NA	5	True	AATAAA	-12	NA	109662098	109672022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109662150_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.27	chr9	+	178	1	Intergenic	novelGene_29431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109663771	109663949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109663800_109663900
ES.36192.28	chr9	+	811	3	NIC	ENSMUSG00000032478.15	novel	930	6	NA	NA	6171	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	243.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109668529	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109668779_109670543_109670584_109671519
ES.36192.3	chr9	+	961	6	FSM	ENSMUSG00000032478.15	ENSMUST00000198201.5	930	6	-14	-17	2	-1	multi-exon	FALSE	canonical	3	47	junction_2	211.367547177896	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661840	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109661876_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.4	chr9	+	1025	6	NIC	ENSMUSG00000032478.15	novel	719	7	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	230.861343667579	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCAGTACTCCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	109661840	109672030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661957_109662263_109662364_109664385_109664483_109670543_109670584_109670994_109671156_109671519
ES.36192.5	chr9	+	5352	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	260.583799701107	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCAGTACTCCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	109661840	109672030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661876_109662263_109662364_109664385_109665108_109665360_109668779_109670543_109670764_109670809_109671156_109671519
ES.36192.6	chr9	+	3504	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	2	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	268.937208697908	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGCAGTACTCCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	109661840	109672030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661876_109662263_109662364_109664385_109665101_109665360_109665943_109669548_109670764_109670809_109671156_109671519
ES.36192.7	chr9	+	1251	8	NNC	ENSMUSG00000032478.15	novel	719	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	250.207261024511	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCTGTGCAAGCTTTCT	NA	False	NA	23	True	AATAAA	-30	NA	109661840	109672040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661957_109662263_109662364_109662637_109662751_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ES.36192.8	chr9	+	852	5	NIC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	254.098775085595	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGTGCAAGCTTTCTC	NA	False	NA	24	True	AATAAA	-31	NA	109661845	109672041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109671519
ES.36192.9	chr9	+	1466	7	NNC	ENSMUSG00000032478.15	novel	719	7	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	260.384758045133	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGCTGGCAGTACTCC	NA	False	NA	9	True	AATAAA	-16	NA	109661850	109672026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109661957_109662263_109662751_109664385_109664483_109668675_109668779_109670543_109670584_109671029_109671156_109671519
ES.36193.1	chr9	-	175	1	Intergenic	novelGene_29432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATCCAC	NA	False	NA	NA	False	NA	NA	NA	109674625	109674450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109674400_109674600
ES.36194.1	chr9	+	182	1	Intergenic	novelGene_29433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATTAAGGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	109681517	109681699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109681500_109681700
ES.36195.1	chr9	-	172	1	Intergenic	novelGene_29434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	109684528	109684356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109684400_109684500
ES.36196.1	chr9	+	177	1	Intergenic	novelGene_29435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACAGAAT	NA	False	NA	NA	False	NA	NA	NA	109684560	109684737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109684600_109684700
ES.36196.2	chr9	+	176	2	Intergenic	novelGene_29436	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	109684561	109686758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109684700_109686720
ES.36196.3	chr9	+	175	1	Intergenic	novelGene_29437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	109686583	109686758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109686600_109686800
ES.36197.1	chr9	-	286	1	Intergenic	novelGene_29438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	109698109	109697823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109697800_109698100
ES.36197.2	chr9	-	171	1	Intergenic	novelGene_29439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGAGCGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	109698107	109697936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109697900_109698100
ES.36198.1	chr9	+	4078	16	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-4629	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.574271864846	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCTAGTTCCTAATAT	NA	False	NA	31	True	AATAAA	-21	NA	109700017	109722966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109700246_109704428_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.10	chr9	+	3662	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	140.060427920908	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704609	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706309_109707347_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.11	chr9	+	4158	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.763575880331	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704615	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707875_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.12	chr9	+	3656	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	140.060427920908	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704615	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707342_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.13	chr9	+	3468	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-31	195	-31	-195	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGAGAGCAAGGGAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	109704615	109722768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.14	chr9	+	3626	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	136.751450389652	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704620	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718879_109720812_109720925_109721146
ES.36198.16	chr9	+	3626	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-21	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	137.166962167295	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTGTTCTCTGCCTAG	NA	False	NA	21	True	AATAAA	-11	NA	109704625	109722956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721166
ES.36198.17	chr9	+	4568	14	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	70	junction_3	127.032307310352	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCTGCCTAGTTCCT	NA	False	NA	26	True	AATAAA	-16	NA	109704625	109722961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.18	chr9	+	3666	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	139.673179024376	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704627	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713170_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.19	chr9	+	3675	16	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	180.962316519213	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704643	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109707834_109707875_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.2	chr9	+	3481	16	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-4584	-549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.574271864846	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTTATCATGTTTTAA	NA	False	NA	NA	False	AGTAAA	-18	NA	109700062	109722414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109700246_109704428_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.21	chr9	+	5154	14	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	-2	intron_retention	FALSE	canonical	3	70	junction_4	127.249835795804	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCTGCCTAGTTCCT	NA	False	NA	26	True	AATAAA	-16	NA	109704646	109722961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.22	chr9	+	3527	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	142.131117064033	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.23	chr9	+	6170	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	-199	intron_retention	FALSE	canonical	3	454	junction_8	40.9152681965747	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTGGAGAGCAAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	109704646	109722764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.24	chr9	+	1044	3	ISM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	0	15239	0	-2824	5prime_fragment	FALSE	canonical	3	492	junction_2	6.5	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGAGTGCTCGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	109704646	109707724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109705228_109706228_109706303_109707335
ES.36198.26	chr9	+	5757	13	ISM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	0	0	0	0	intron_retention	FALSE	canonical	3	454	junction_8	32.0607063067689	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778
ES.36198.27	chr9	+	3532	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	145.238347259919	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704646	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.3	chr9	+	3871	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	-237	-2	-237	2	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCCTAGTTCCTAATA	NA	False	NA	30	True	AATAAA	-20	NA	109704409	109722965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.30	chr9	+	2501	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	1	1130	1	118	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGGG	NA	False	NA	NA	False	NA	NA	NA	109704647	109721833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.33	chr9	+	6872	13	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	454	junction_7	42.4148657116032	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704647	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109713262_109713410_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.34	chr9	+	4658	14	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	-3	intron_retention	FALSE	canonical	3	70	junction_3	127.271038181368	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTCTCTGCCTAGTTCC	NA	False	NA	25	True	AATAAA	-15	NA	109704647	109722960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.36	chr9	+	3655	16	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	181.368305451152	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704647	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717608_109717634_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.38	chr9	+	3416	16	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.32272536422	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTCTCTGCCTAGTT	NA	False	NA	23	True	AATAAA	-13	NA	109704647	109722958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109704843_109705052_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.4	chr9	+	3720	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-63	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	135.820353288257	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCCTAGTTCCTAAT	NA	False	NA	29	True	AATAAA	-19	NA	109704583	109722964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713386_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.42	chr9	+	3837	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	28	236	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCCATGTGGTCTTAC	NA	False	NA	NA	False	ATTAAA	-12	NA	109704674	109723199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.44	chr9	+	2624	14	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	187.437847687072	696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704990	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713409_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718888_109721677
ES.36198.45	chr9	+	2045	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	346	1241	-15	7	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTATTGTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	109704992	109721722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.46	chr9	+	3047	14	ISM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	1579	7	852	-7	3prime_fragment	FALSE	canonical	3	454	junction_7	41.134215303553	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTGTTCTCTGCCTAG	NA	False	NA	21	True	AATAAA	-11	NA	109706225	109722956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.47	chr9	+	4957	13	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	852	0	intron_retention	FALSE	canonical	3	454	junction_7	36.6298110226569	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109706225	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109720925_109721146
ES.36198.48	chr9	+	2570	3	ISM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	13620	2	363	-2	3prime_fragment	FALSE	canonical	3	574	junction_2	10.5	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCTGCCTAGTTCCT	NA	False	NA	26	True	AATAAA	-16	NA	109718266	109722961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109718910_109720812_109720925_109721146
ES.36198.6	chr9	+	3651	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-63	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	144.249044995967	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTGCCTAGTTCCTA	NA	False	NA	27	True	AATAAA	-17	NA	109704583	109722962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ES.36198.8	chr9	+	7426	11	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-47	0	intron_retention	FALSE	canonical	3	454	junction_8	34.9841392633862	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704599	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109718199_109718778
ES.36198.9	chr9	+	3512	13	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	-42	0	combination_of_known_splicesites	TRUE	canonical	3	39	junction_10	139.10817133919	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704604	109722963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109718778_109718910_109720812_109720925_109721146
ES.36199.1	chr9	-	5122	1	Antisense	novelGene_ENSMUSG00000032477.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAACAAGTGTTTATGG	NA	False	NA	NA	False	NA	NA	NA	109717265	109712143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109712100_109717300
ES.362.1	chr1	+	4295	29	NNC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	-153	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	28.423366357665	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39939919	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.10	chr1	+	4617	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	28.8530568378619	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39939928	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.11	chr1	+	4642	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.1361883059282	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39939932	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053329_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.13	chr1	+	4651	32	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-113	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	32.4764863310684	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39939959	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053329_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.14	chr1	+	4475	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	26.5580377625656	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39939971	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.15	chr1	+	4382	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-100	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	27.0099290326647	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGTGCTAGGAGTGCTT	NA	False	NA	29	True	AATAAA	-39	NA	39939972	40064130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.16	chr1	+	4131	29	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-93	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	26.3961915543025	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39939979	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.17	chr1	+	4911	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-80	354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.2572632000223	254	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTAGGATACCTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	39939992	40064483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_39951077_39951181_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.18	chr1	+	4643	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	28.4697890559254	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39939995	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.19	chr1	+	4704	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-68	355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	27.0099290326647	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTAGGATACCTTTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	39940004	40064484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.2	chr1	+	4706	31	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-153	-2	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	26.1908380927377	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCGGTGCTAGGAGTG	NA	False	NA	26	True	AATAAA	-36	NA	39939919	40064127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.20	chr1	+	4092	29	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	28.8488982211007	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940030	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.21	chr1	+	4293	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	24.4259661839409	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGTGCTAGGAGTGCTT	NA	False	NA	29	True	AATAAA	-39	NA	39940050	40064130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.24	chr1	+	4553	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-18	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	32.0620232258249	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39940054	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042922_40043148_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.25	chr1	+	4559	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	34.3869484284695	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCATCGGTGCTAG	NA	False	NA	21	True	AATAAA	-31	NA	39940054	40064122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049701_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.26	chr1	+	4297	32	NNC	ENSMUSG00000026074.16	novel	3960	32	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.2827260650088	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCACCATCGGTGCTAGG	NA	False	NA	22	True	AATAAA	-32	NA	39940055	40064123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940075_39940231_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.27	chr1	+	4253	29	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-17	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	32.9700505716002	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGCTGTCTGGAC	NA	False	NA	4	True	AATAAA	-14	NA	39940055	40064105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40042913_40043148_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.28	chr1	+	4459	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	30.688923083093	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940055	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.29	chr1	+	4349	30	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	31.5939608010188	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940055	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.30	chr1	+	5932	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.6880629470047	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCATGGCTTCATGGTC	NA	False	NA	NA	False	AATAAA	-16	NA	39940055	40065463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049701_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.31	chr1	+	5634	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	27.0099290326647	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGCTTCATGGTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	39940056	40065466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.32	chr1	+	4442	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.8008976841929	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCACCATCGGTGCTAGG	NA	False	NA	22	True	AATAAA	-32	NA	39940058	40064123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042922_40043148_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.33	chr1	+	6306	33	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.2893868903316	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTTCATGGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	39940058	40065465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_39971967_39972195_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039689_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.34	chr1	+	4369	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-11	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.9315185782921	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGACTCCACCATCG	NA	False	NA	14	True	AATAAA	-24	NA	39940061	40064115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053862_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.35	chr1	+	4518	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-10	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.1104841206662	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39940062	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.36	chr1	+	4735	32	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.6530357504054	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATCGGTGCTAGGAGT	NA	False	NA	25	True	AATAAA	-35	NA	39940062	40064126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.37	chr1	+	5395	28	NNC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	-9	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.2202213086704	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTCATGGCTTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	39940063	40065459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.38	chr1	+	4129	28	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.5038027856152	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940064	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001455_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.39	chr1	+	4512	31	NIC	ENSMUSG00000026074.16	novel	3960	32	NA	NA	-8	-21	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	28.229692799525	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTGTCTGGACTCC	NA	False	NA	7	True	AATAAA	-17	NA	39940064	40064108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.4	chr1	+	4780	32	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-146	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.9610194422475	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39939926	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.40	chr1	+	4472	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-8	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	32.002239504968	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGCTGTCTGGAC	NA	False	NA	4	True	AATAAA	-14	NA	39940064	40064105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049701_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.41	chr1	+	4504	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	32.9804824437458	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940064	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.42	chr1	+	4369	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	23.9127924112531	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940065	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.43	chr1	+	4280	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.4637769103291	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCGGTGCTAGGAGTG	NA	False	NA	26	True	AATAAA	-36	NA	39940065	40064127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.45	chr1	+	4208	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.8063559281221	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940072	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940733_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053329_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.46	chr1	+	4005	28	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	1	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.8932547448004	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGTGCTGTCTGGACT	NA	False	NA	5	True	AATAAA	-15	NA	39940073	40064106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.47	chr1	+	4721	32	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.3508343451971	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940073	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.48	chr1	+	4199	29	NNC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.1814054563013	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATCGGTGCTAGGAGT	NA	False	NA	25	True	AATAAA	-35	NA	39940073	40064126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001455_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.49	chr1	+	4131	29	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	25.9180419391432	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940073	40064129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.5	chr1	+	4357	29	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-146	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	27.0118076977836	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGTGCTGTCTGGACT	NA	False	NA	5	True	AATAAA	-15	NA	39939926	40064106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063788
ES.362.50	chr1	+	4610	32	NIC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_16	30.8507197560981	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCACCATCGGTGCTAGG	NA	False	NA	22	True	AATAAA	-32	NA	39940074	40064123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.51	chr1	+	4308	30	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.5271243842214	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTCCACCATCGGTGCT	NA	False	NA	19	True	AATAAA	-29	NA	39940075	40064120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001391_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.53	chr1	+	7278	29	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_18	25.9360231322839	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940081	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.54	chr1	+	3951	28	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.2202213086704	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCATCGGTGCTAGGAGT	NA	False	NA	25	True	AATAAA	-35	NA	39940081	40064126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.55	chr1	+	5067	30	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	13	1	intron_retention	FALSE	canonical	1	13	junction_19	25.716463679163	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGGTGCTAGGAGTGCTT	NA	False	NA	29	True	AATAAA	-39	NA	39940085	40064130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40047500_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.57	chr1	+	4034	29	NNC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	13	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	31.57423630049	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39940085	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053329_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063468_40063610_40063788
ES.362.59	chr1	+	4200	30	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	16	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.9151132904171	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39940088	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001455_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053329_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.6	chr1	+	4587	31	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-145	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	32.3688636398211	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	39939927	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042922_40043148_40043966_40044074_40045833_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.61	chr1	+	2793	20	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	28	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.4695492668406	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGTCCAAGGAGGGCAC	NA	False	NA	NA	False	AAAACA	-40	NA	39940100	40049801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716
ES.362.62	chr1	+	4242	29	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	52	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.9878802839077	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGTGCTGTCTGGACT	NA	False	NA	5	True	AATAAA	-15	NA	39940124	40064106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.63	chr1	+	4315	31	NNC	ENSMUSG00000026074.16	novel	3960	32	NA	NA	109	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	31.2291886257428	253	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940181	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039790_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.65	chr1	+	8841	27	NIC	ENSMUSG00000026074.16	novel	3759	31	NA	NA	-38	-2	intron_retention	FALSE	canonical	1	13	junction_18	27.6485765814851	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCGGTGCTAGGAGTG	NA	False	NA	26	True	AATAAA	-36	NA	39940291	40064127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40047500_40048847_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.66	chr1	+	4486	31	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	146	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	32.1039976742254	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39940535	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.67	chr1	+	3647	27	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	9173	20	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	28.4699831546912	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGCTGTCTGGAC	3128	False	NA	4	True	AATAAA	-14	NA	40013182	40064105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.68	chr1	+	201	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATCAGACAGCCCA	4062	False	NA	NA	False	NA	NA	NA	40014116	40014317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_40014100_40014300
ES.362.7	chr1	+	5817	30	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-145	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	30.1304338500999	262	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGCTTCATGGTCATC	NA	False	NA	NA	False	AATAAA	-19	NA	39939927	40065466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.70	chr1	+	3760	27	NIC	ENSMUSG00000026074.16	novel	3960	32	NA	NA	11902	-4	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	30.5793419459307	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCATCGGTGCTAGGAG	5857	False	NA	24	True	AATAAA	-34	NA	40015911	40064125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.71	chr1	+	3583	26	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	11917	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.1282115424301	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTGTCTGGACTCC	5872	False	NA	7	True	AATAAA	-17	NA	40015926	40064108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024335_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.72	chr1	+	3668	25	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-16430	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	33.7160322893032	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCTGGACTCCACCA	NA	False	NA	11	True	AATAAA	-21	NA	40022324	40064112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.73	chr1	+	4487	21	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-12941	-5	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	28.4715208585702	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTTCATGGTCAT	437	False	NA	NA	False	AATAAA	-18	NA	40025813	40065465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.74	chr1	+	4329	20	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-10620	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	32.8269195661038	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTTCATGGTCAT	2758	False	NA	NA	False	AATAAA	-18	NA	40028134	40065465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042922_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.76	chr1	+	4099	18	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-2524	-5	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	30.0017300539215	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTTCATGGTCAT	7433	False	NA	NA	False	AATAAA	-18	NA	40036230	40065465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.77	chr1	+	3798	16	NIC	ENSMUSG00000026074.16	novel	3918	31	NA	NA	-2449	20	intron_retention	FALSE	canonical	1	13	junction_5	34.8537260880702	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGCTGTCTGGAC	7508	False	NA	4	True	AATAAA	-14	NA	40036305	40064105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40036343_40039047_40039910_40043966_40044074_40045830_40045983_40046592_40047500_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.78	chr1	+	2763	18	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.7811032753926	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCGGTGCTAGGAGTG	NA	False	NA	26	True	AATAAA	-36	NA	40039043	40064127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.79	chr1	+	2671	8	ISM	ENSMUSG00000026074.16	ENSMUST00000168431.7	5632	30	113613	13	674	-13	3prime_fragment	FALSE	canonical	3	98	junction_2	15.5274608618514	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTGCTTCATGGCTTC	NA	False	NA	NA	False	AATAAA	-10	NA	40053685	40065457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.8	chr1	+	4875	30	NNC	ENSMUSG00000026074.16	novel	5782	31	NA	NA	-144	357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	26.5580377625656	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGGATACCTTTTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	39939928	40064486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.362.80	chr1	+	4099	3	NIC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	-3330	-22	intron_retention	FALSE	canonical	3	134	junction_1	1.5	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGCTGTCTGGACTC	NA	False	NA	6	True	AATAAA	-16	NA	40059039	40064107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_40062680_40063469_40063610_40063788
ES.362.9	chr1	+	4385	30	NNC	ENSMUSG00000026074.16	novel	4082	31	NA	NA	-144	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	30.4937177990498	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCGGTGCTAGGAGTGC	NA	False	NA	27	True	AATAAA	-37	NA	39939928	40064128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ES.3620.1	chr10	-	177	1	Intergenic	novelGene_2761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	572	False	NA	NA	False	NA	NA	NA	94479016	94478839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94478800_94479000
ES.36200.1	chr9	-	1694	1	Intergenic	novelGene_29440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCCAAGCTGAAC	NA	False	NA	NA	False	NA	NA	NA	109727173	109725479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109725500_109727200
ES.36201.1	chr9	-	188	1	Intergenic	novelGene_29441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTAATTTTAACTATTA	7996	False	NA	NA	False	NA	NA	NA	109737898	109737710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109737700_109737900
ES.36202.1	chr9	-	175	1	Intergenic	novelGene_29442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	109758345	109758170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109758200_109758300
ES.36203.1	chr9	-	164	1	Intergenic	novelGene_29443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTATATAATTGGGAGT	NA	False	NA	NA	False	AAGAAA	-4	NA	109760350	109760186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109760200_109760400
ES.36204.1	chr9	+	5152	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-40	10	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCCTGGGAGTGTCTA	NA	False	NA	33	True	AATAAA	-25	NA	109760487	109912251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.10	chr9	+	5157	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-358	774	46	0	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760573	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.100	chr9	+	5394	16	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	9943	0	intron_retention	FALSE	canonical	1	3	junction_8	87.857612077725	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109808027	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.101	chr9	+	159	1	Intergenic	novelGene_29449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	109808418	109808577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109808400_109808600
ES.36204.102	chr9	+	4479	17	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	67906	777	-26349	0	3prime_fragment	FALSE	canonical	3	101	junction_16	62.9138485847909	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109828837	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.103	chr9	+	5537	16	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-26302	1	intron_retention	FALSE	canonical	3	101	junction_15	64.913138543407	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109828884	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.104	chr9	+	4239	16	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-26296	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	87.7487321845735	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109828890	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910908
ES.36204.105	chr9	+	194	1	Intergenic	novelGene_29452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTACTGATACATTATG	NA	False	NA	NA	False	NA	NA	NA	109846015	109846209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109846000_109846200
ES.36204.108	chr9	+	6149	14	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	94269	761	14	13	intron_retention	FALSE	canonical	3	289	junction_2	29.8936972637156	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGGGAGTGTCTAAGG	5894	False	NA	36	True	AATAAA	-28	NA	109855200	109912254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848
ES.36204.109	chr9	+	4918	15	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	24	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	104.935257007668	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	5904	False	NA	14	True	AATAAA	-14	NA	109855210	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.110	chr9	+	172	2	NNC	ENSMUSG00000032479.16	novel	442	3	NA	NA	1809	-3429	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7689	False	NA	NA	False	NA	NA	NA	109856995	109905674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109857051_109905557
ES.36204.111	chr9	+	6693	8	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-2372	0	intron_retention	FALSE	canonical	3	75	junction_6	101.910925492284	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	1786	False	NA	20	True	AATAAA	-12	NA	109863437	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848
ES.36204.112	chr9	+	4144	13	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	102910	786	-2372	-1	3prime_fragment	FALSE	canonical	3	302	junction_7	26.1990245789588	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTTGTATTGAAATGG	1786	False	NA	19	True	AATAAA	-11	NA	109863437	109912237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.115	chr9	+	3258	4	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-2282	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	179.919117630364	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	1876	False	NA	14	True	AATAAA	-14	NA	109863527	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109864575_109865809_109865924_109892084_109892172_109911002
ES.36204.116	chr9	+	3676	10	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-1985	1	intron_retention	FALSE	canonical	3	75	junction_7	90.4172768369922	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	2173	False	NA	21	True	AATAAA	-13	NA	109863824	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488
ES.36204.117	chr9	+	3487	13	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-1830	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.670857910208	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	2328	False	NA	20	True	AATAAA	-12	NA	109863979	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109864565_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.118	chr9	+	4263	13	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-1816	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_7	95.9891125191926	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	2342	False	NA	16	True	AATAAA	-16	NA	109863993	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109897952_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.119	chr9	+	5738	11	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-1800	1	intron_retention	FALSE	canonical	3	311	junction_7	24.5397636500436	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	2358	False	NA	21	True	AATAAA	-13	NA	109864009	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.12	chr9	+	4694	17	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-25	13	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	87.976204169082	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGGGAGTGTCTAAGG	NA	False	NA	36	True	AATAAA	-28	NA	109760842	109912254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.124	chr9	+	4211	12	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-1334	0	intron_retention	FALSE	canonical	3	302	junction_6	27.086942967763	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	2824	False	NA	20	True	AATAAA	-12	NA	109864475	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.125	chr9	+	3074	13	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-1304	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	98.4046351663489	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTTGTATTGAAATGG	2854	False	NA	19	True	AATAAA	-11	NA	109864505	109912237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901778_109907076_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.126	chr9	+	6540	9	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	302	junction_5	28.8852795555106	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTTATGTTGCTTCT	4156	False	NA	15	True	AATAAA	-15	NA	109865807	109913013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848
ES.36204.127	chr9	+	3010	12	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	105281	784	-1	1	3prime_fragment	FALSE	canonical	3	302	junction_6	25.3566298566263	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	4157	False	NA	21	True	AATAAA	-13	NA	109865808	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.128	chr9	+	6828	8	ISM	ENSMUSG00000032479.16	ENSMUST00000164930.8	4925	11	9349	-1	-1194	0	intron_retention	FALSE	canonical	2	3	junction_5	120.143281806622	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109890464	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848
ES.36204.129	chr9	+	3256	1	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	30	-2868	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	109891696	109894952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109891700_109895000
ES.36204.13	chr9	+	5687	16	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-25	2	intron_retention	FALSE	canonical	3	75	junction_13	73.123153348003	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760842	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488
ES.36204.130	chr9	+	8556	2	ISM	ENSMUSG00000032479.16	ENSMUST00000199461.5	1176	7	-360	5453	-360	-3401	intron_retention	FALSE	canonical	3	326	junction_1	0	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATTGGTGGACTAGT	NA	False	NA	NA	False	NA	NA	NA	109896291	109905702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109896737_109897591
ES.36204.131	chr9	+	3345	9	ISM	ENSMUSG00000032479.16	ENSMUST00000163979.7	3320	11	4892	-778	-101	1	3prime_fragment	FALSE	canonical	3	302	junction_3	23.3368672919053	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGTTGCTTCTGTC	111	False	NA	18	True	AATAAA	-18	NA	109896550	109913016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.132	chr9	+	5242	8	NIC	ENSMUSG00000032479.16	novel	4925	11	NA	NA	-66	0	intron_retention	FALSE	canonical	3	101	junction_7	86.3393872801884	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	146	False	NA	16	True	AATAAA	-16	NA	109896585	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109896737_109897591_109897652_109897760_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.134	chr9	+	6293	4	ISM	ENSMUSG00000032479.16	ENSMUST00000163979.7	3320	11	6597	-776	340	0	intron_retention	FALSE	canonical	3	311	junction_1	30.0111090542597	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	1816	False	NA	16	True	AATAAA	-16	NA	109898255	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109900208_109901680_109901774_109907070_109907153_109908848
ES.36204.135	chr9	+	326	1	Intergenic	novelGene_29454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	861	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACATACAGCCTT	9062	False	NA	NA	False	TTTAAA	-25	NA	109905501	109905827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109905500_109905800
ES.36204.136	chr9	+	176	2	Antisense	novelGene_ENSMUSG00000064877.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1017	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCCACACTCTACTTT	9064	False	NA	NA	False	AATAAA	-10	NA	109905503	109956112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_109905663_109956095
ES.36204.137	chr9	+	5559	2	FSM	ENSMUSG00000032479.16	ENSMUST00000196763.2	740	2	-907	-3912	-907	0	multi-exon	FALSE	canonical	3	382	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	9321	False	NA	17	True	AATAAA	-17	NA	109905760	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109907153_109908848
ES.36204.138	chr9	+	158	1	Intergenic	novelGene_29456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	109924953	109925111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109925000_109925100
ES.36204.139	chr9	+	175	2	Antisense	novelGene_ENSMUSG00000064877.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTGTAGGGTT	NA	False	NA	NA	False	NA	NA	NA	109926308	109953826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_109926452_109953794
ES.36204.14	chr9	+	5540	18	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-20	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	97.7644581295084	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760847	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.140	chr9	+	172	1	Intergenic	novelGene_29457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	109926309	109926481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109926300_109926500
ES.36204.141	chr9	+	345	1	Antisense	novelGene_ENSMUSG00000032480.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGCAAAAAAACCCTAAT	1630	False	NA	NA	False	NA	NA	NA	109938860	109939205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_109938900_109939200
ES.36204.142	chr9	+	347	1	Antisense	novelGene_ENSMUSG00000032480.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGGTATTTGCT	2228	False	NA	NA	False	NA	NA	NA	109939458	109939805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_109939500_109939800
ES.36204.143	chr9	+	176	1	Intergenic	novelGene_29458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAGCTCAG	1294	False	NA	NA	False	NA	NA	NA	109949573	109949749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109949600_109949700
ES.36204.144	chr9	+	180	1	Intergenic	novelGene_29459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGCACTGAC	5011	False	NA	NA	False	NA	NA	NA	109953290	109953470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109953300_109953500
ES.36204.15	chr9	+	4587	15	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	90.5861862695254	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760847	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109910488_109910679_109910802
ES.36204.16	chr9	+	5420	16	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	106.997736216967	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760847	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.17	chr9	+	4874	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	84.1275189600096	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760848	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.18	chr9	+	1023	5	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-18	-17	intron_retention	FALSE	canonical	2	10	junction_1	138.035095175104	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	109760849	109857172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761013_109807917_109808160_109828839_109828909_109855168_109855292_109856746
ES.36204.2	chr9	+	6100	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	-14	5	-14	3	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760513	109913018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.21	chr9	+	7121	8	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-81	42060	-17	13766	5prime_fragment	FALSE	canonical	3	256	junction_1	36.9787583813812	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACAGGTAAATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	109760850	109870955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809
ES.36204.22	chr9	+	5656	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-81	-2	-17	2	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760850	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.23	chr9	+	5449	17	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-17	2	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	87.976204169082	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760850	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.24	chr9	+	5685	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	81.2804169086226	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760853	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893367_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.25	chr9	+	4860	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	82.331627662644	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109760853	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901702_109907118_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.26	chr9	+	4739	18	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	97.3347948255762	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109760853	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.27	chr9	+	4986	9	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-78	18031	-14	-2836	intron_retention	FALSE	canonical	3	256	junction_1	41.9940471971921	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATGGAAACCAACAGAT	NA	False	NA	NA	False	NA	NA	NA	109760853	109894984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084
ES.36204.28	chr9	+	5105	18	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-76	774	-12	0	intron_retention	FALSE	canonical	3	256	junction_1	33.3962267101765	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760855	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.31	chr9	+	5861	16	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	13	8	intron_retention	FALSE	canonical	3	75	junction_12	73.0815678236007	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCCTGGGAGTGTC	NA	False	NA	31	True	AATAAA	-23	NA	109760880	109912249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.32	chr9	+	3084	4	FSM	ENSMUSG00000032479.16	ENSMUST00000169851.8	3446	4	13	349	13	-349	multi-exon	FALSE	canonical	2	3	junction_3	148.8944443408	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATATTTTCTGGGGT	NA	False	NA	NA	False	AATAAA	-19	NA	109760880	109834458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109831813
ES.36204.33	chr9	+	3894	12	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	119.525162467197	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760886	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.34	chr9	+	4950	20	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	19	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	113.459964017723	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCCTGGGAGTGTCTA	NA	False	NA	33	True	AATAAA	-25	NA	109760886	109912251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109898470_109898567_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.35	chr9	+	6514	16	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	19	0	intron_retention	FALSE	canonical	3	75	junction_12	90.5809889301036	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760886	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.37	chr9	+	4839	19	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	93.5320635588687	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109760886	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907157_109908854_109908962_109910488_109910679_109910908
ES.36204.4	chr9	+	5887	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760518	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.41	chr9	+	4849	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	81.0651410498101	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGGGAGTGTCTAAGG	NA	False	NA	36	True	AATAAA	-28	NA	109760886	109912254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.42	chr9	+	8274	14	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	3	intron_retention	FALSE	canonical	3	75	junction_12	77.83399114471	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760887	109913018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848
ES.36204.43	chr9	+	4517	16	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	106.415830067189	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109760887	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.44	chr9	+	5608	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	84.1275189600096	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760887	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.45	chr9	+	5704	20	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	114.338395554866	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760887	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109773951_109774042_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.46	chr9	+	4727	18	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	20	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	97.7644581295084	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760887	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.47	chr9	+	6173	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	21	0	intron_retention	FALSE	canonical	3	256	junction_1	34.423772218483	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109760888	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.48	chr9	+	5937	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	23	3	intron_retention	FALSE	canonical	0	0	junction_2	108.424306531855	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760890	109913018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109773951_109774042_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.5	chr9	+	5775	17	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	104.157032887847	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760522	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863548_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.50	chr9	+	4791	8	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	24	-2870	intron_retention	FALSE	canonical	1	1	junction_3	123.217577595777	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109760891	109894950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084
ES.36204.54	chr9	+	6717	18	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	26	2	intron_retention	FALSE	canonical	3	101	junction_17	63.5049517182209	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760893	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.56	chr9	+	5473	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	30	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	83.0059821915552	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109760897	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.57	chr9	+	4758	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	31	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	82.0909048961374	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCCTGGGAGTGTCTA	NA	False	NA	33	True	AATAAA	-25	NA	109760898	109912251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897950_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.58	chr9	+	5804	20	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	104.991913684141	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATGTTATGTTGCTT	NA	False	NA	13	True	AATAAA	-13	NA	109760898	109913011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109898470_109898567_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.59	chr9	+	5026	20	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.716785711463	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760898	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109773951_109774042_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.6	chr9	+	5324	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	-5	772	-5	10	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCCTGGGAGTGTCTA	NA	False	NA	33	True	AATAAA	-25	NA	109760522	109912251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.61	chr9	+	7360	17	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-33	3	31	-2	intron_retention	FALSE	canonical	3	256	junction_1	34.056421475986	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760898	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848
ES.36204.62	chr9	+	5580	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	31	3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	83.5253520140187	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTTGCTTCTGTCCT	NA	False	NA	20	True	AATAAA	-20	NA	109760898	109913018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.63	chr9	+	7460	17	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	32	1	intron_retention	FALSE	canonical	3	101	junction_16	64.906663756505	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760899	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109910679_109910908
ES.36204.65	chr9	+	5656	20	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	111.886963140375	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGTTGCTTCTGTC	NA	False	NA	18	True	AATAAA	-18	NA	109760900	109913016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109874991_109875043_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.66	chr9	+	4079	14	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	92.5282621145606	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTTATGTTGCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	109760909	109913013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.69	chr9	+	4974	20	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	103.84969428347	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760911	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109874991_109875043_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.70	chr9	+	4830	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	84.7182180560252	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760911	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.71	chr9	+	5823	18	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	-20	0	-20	0	intron_retention	FALSE	canonical	3	256	junction_1	33.3962267101765	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760911	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488
ES.36204.72	chr9	+	5683	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.4341862441087	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760911	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863455_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.73	chr9	+	6360	17	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-20	1	intron_retention	FALSE	canonical	0	0	junction_2	140.053658801725	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGTTGCTTCTGTC	NA	False	NA	18	True	AATAAA	-18	NA	109760911	109913016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109822105_109822163_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863734_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.74	chr9	+	4847	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	81.2804169086226	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760915	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893367_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.75	chr9	+	3678	18	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	96.4876598955054	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760916	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.77	chr9	+	5084	17	NNC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	113.187051351955	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760918	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863734_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.78	chr9	+	7548	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	-12	0	intron_retention	FALSE	canonical	3	256	junction_1	34.0651375125655	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760919	109912241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109910679_109910802
ES.36204.8	chr9	+	5769	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	80.7510272074711	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760546	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863734_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.80	chr9	+	6780	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	-2	intron_retention	FALSE	canonical	3	256	junction_1	33.4132145501506	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109760931	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.81	chr9	+	7713	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	256	junction_1	32.659510079239	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109760936	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.83	chr9	+	5450	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	83.6916816526868	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760938	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.84	chr9	+	5723	19	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	82.434485771699	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760941	109913015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901626_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.87	chr9	+	4489	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	37	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	113.659149846152	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760968	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109828839_109828909_109855168_109855292_109856746_109856861_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.88	chr9	+	5681	20	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	103.84969428347	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTTATGTTGCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	109760978	109913013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109874991_109875043_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.89	chr9	+	5609	9	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	47	12814	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	110.082923289673	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGTCTTCATCTTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	109760978	109870003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109866355
ES.36204.9	chr9	+	6284	15	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	44	1	intron_retention	FALSE	canonical	3	75	junction_12	75.6006222304595	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109760571	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488
ES.36204.90	chr9	+	4801	19	NNC	ENSMUSG00000032479.16	novel	3320	11	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	93.3496844142867	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109761023	109912238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109761106_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.91	chr9	+	236	1	Intergenic	novelGene_29446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCTTGTAACTAGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	109792631	109792867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109792600_109792900
ES.36204.92	chr9	+	177	1	Intergenic	novelGene_29447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCTTATTATTTA	NA	False	NA	NA	False	NA	NA	NA	109797130	109797307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_109797100_109797300
ES.36204.93	chr9	+	2014	2	Genic_Genomic	ENSMUSG00000106208.2	novel	777	1	NA	NA	-748	907	multi-exon	FALSE	canonical	0	0	junction_1	0	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGACTCAAACCAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	109798752	109801184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_109800675_109801092
ES.36204.94	chr9	+	5398	16	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	9832	2	combination_of_known_junctions	FALSE	canonical	3	75	junction_12	71.3094664122513	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	False	NA	19	True	AATAAA	-19	NA	109807916	109913017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.95	chr9	+	4721	18	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	46985	776	9832	1	3prime_fragment	FALSE	canonical	3	101	junction_17	61.680446728688	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTGAAATGGCC	NA	False	NA	21	True	AATAAA	-13	NA	109807916	109912239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ES.36204.96	chr9	+	5600	18	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	47389	11	9832	-2	3prime_fragment	FALSE	canonical	3	289	junction_4	27.7995792953156	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCATGTTATGTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	109807916	109913012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.97	chr9	+	4713	17	NNC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	9832	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	115.039514271184	1014	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTTTGTATTGAAATG	NA	False	NA	18	True	AATAAA	-10	NA	109807916	109912236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109898470_109898567_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ES.36204.99	chr9	+	9583	13	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	9907	0	intron_retention	FALSE	canonical	3	75	junction_10	79.3530700239267	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTATGTTGCTTCTG	NA	False	NA	16	True	AATAAA	-16	NA	109807991	109913014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488
ES.36205.1	chr9	-	695	1	Intergenic	novelGene_29444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGTAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	109764113	109763418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109763400_109764100
ES.36206.1	chr9	-	2497	2	Antisense	novelGene_ENSMUSG00000032479.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109780429	109767323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109769788_109780396
ES.36207.1	chr9	-	6691	1	Intergenic	novelGene_29445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGTCGAAACCAGTA	NA	False	NA	NA	False	NA	NA	NA	109794337	109787646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109787600_109794300
ES.36207.2	chr9	-	5113	2	Antisense	novelGene_ENSMUSG00000032479.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109794337	109787671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109788091_109789643
ES.36208.1	chr9	-	178	1	Intergenic	novelGene_29448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAGTAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	109803253	109803075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109803100_109803300
ES.36209.1	chr9	-	514	1	Intergenic	novelGene_29450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGGTAAGCACCACT	8312	False	NA	NA	False	NA	NA	NA	109841135	109840621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109840600_109841100
ES.36209.2	chr9	-	177	2	Antisense	novelGene_ENSMUSG00000032479.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109850748	109840642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109840800_109850728
ES.36209.3	chr9	-	176	1	Intergenic	novelGene_29451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTATCAGACCC	7884	False	NA	NA	False	NA	NA	NA	109841563	109841387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109841400_109841600
ES.3621.1	chr10	+	235	1	Intergenic	novelGene_2762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTCTCTTGGTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	94513754	94513989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_94513800_94514000
ES.36210.1	chr9	-	1019	1	Intergenic	novelGene_29453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCACCCAAC	NA	False	NA	NA	False	NA	NA	NA	109874425	109873406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109873400_109874400
ES.36211.1	chr9	-	3880	20	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	5324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.322170789015	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGTAAGTAAAACAAGCA	NA	False	NA	NA	False	AAAAAG	-12	NA	109930102	109908063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109908099_109913391_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915502_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.10	chr9	-	3065	16	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-1498	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	187.267532927865	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109922037	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914933_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921482_109921925
ES.36211.100	chr9	-	4225	22	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_9	168.964432919584	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109946470	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915728_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944651_109946425
ES.36211.102	chr9	-	4122	23	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-15	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_22	163.528423995786	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCTGCTGTCCTC	NA	False	NA	-7	True	AATAAA	-15	NA	109946715	109913393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946555
ES.36211.103	chr9	-	3876	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.419447431297	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCTGCTGTCCTC	NA	False	NA	-7	True	AATAAA	-15	NA	109946484	109913393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913717_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922146_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.104	chr9	-	3774	21	NIC	ENSMUSG00000032480.18	novel	3829	22	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	146.166651463321	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTGCTGCTGTCCTC	NA	False	NA	-7	True	AATAAA	-15	NA	109946483	109913393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109944558_109944651_109946425
ES.36211.106	chr9	-	2325	12	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-585	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	171.202359603728	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109917107	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916257_109916497
ES.36211.108	chr9	-	5117	21	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	-4	intron_retention	FALSE	canonical	3	46	junction_19	167.132253021372	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109946484	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
ES.36211.109	chr9	-	3975	24	NNC	ENSMUSG00000032480.18	novel	3885	23	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	199.3972675875	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109946481	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
ES.36211.11	chr9	-	3771	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	35	0	-13	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930120	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.110	chr9	-	4044	24	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-3	-4	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	202.330439640932	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109946445	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913848_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945861_109946425
ES.36211.111	chr9	-	4027	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	264	junction_15	83.9733820260259	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109930111	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109914122_109914212_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.112	chr9	-	3926	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.676438418773	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGAGTGCTGCTGTCCT	NA	False	NA	-8	True	AATAAA	-14	NA	109946471	109913394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913877_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.114	chr9	-	3635	18	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.361948368898	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGAGTGCTGCTGTCC	NA	False	NA	-9	True	AATAAA	-13	NA	109930111	109913395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914198_109914371_109914508_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.115	chr9	-	4009	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	206.77254741294	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGAGTGCTGCTGTCC	NA	False	NA	-9	True	AATAAA	-13	NA	109946484	109913395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927921_109938093_109938192_109942038_109942159_109944103_109944220_109944553_109944651_109946425
ES.36211.117	chr9	-	4030	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	3	-7	intron_retention	FALSE	canonical	3	264	junction_17	82.0006329623642	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTGAGTGCTGCTGT	NA	False	NA	-11	True	AATAAA	-11	NA	109930103	109913397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.119	chr9	-	2368	1	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-646	51	mono-exon	FALSE	NA	NA	NA	NA	NA	646	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTGCAAACAGGAGGTAA	NA	False	NA	NA	False	NA	NA	NA	109921185	109918817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109918800_109921200
ES.36211.12	chr9	-	6019	16	NNC	ENSMUSG00000032480.18	novel	4373	22	NA	NA	2072	0	intron_retention	FALSE	non_canonical	0	0	junction_12	161.720279770006	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109942073	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109914122_109914212_109914640_109914752_109915100_109915187_109915395_109915598_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109923368_109925428_109926268_109927796_109927928_109938093_109938190_109942038
ES.36211.120	chr9	-	2679	6	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	0	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	214.559455629436	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109930106	109918849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927792_109927928_109929883
ES.36211.121	chr9	-	156	1	Intergenic	novelGene_29455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	109924728	109924572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109924600_109924700
ES.36211.122	chr9	-	1839	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-54	-361	3	361	multi-exon	FALSE	canonical	3	279	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGAAGACTTCTGGCTA	NA	False	NA	NA	False	AAAAAG	-23	NA	109946496	109942882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109944651_109946425
ES.36211.123	chr9	-	3573	1	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	1	338	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACACCCCAAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	109946478	109942905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109942900_109946500
ES.36211.124	chr9	-	3321	1	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-25	34	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAATGTACTACCGGTA	NA	False	NA	NA	False	NA	NA	NA	109946530	109943209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109943200_109946500
ES.36211.125	chr9	-	1499	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	-41	-34	4	34	multi-exon	FALSE	canonical	3	279	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAATGTACTACCGGTA	NA	False	NA	NA	False	NA	NA	NA	109946483	109943209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109944651_109946425
ES.36211.126	chr9	-	1718	3	NNC	ENSMUSG00000032480.18	novel	420	5	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_2	9	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109946199	109943243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109944651_109945745_109945861_109946003
ES.36211.14	chr9	-	4257	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	264	junction_15	85.3947695509899	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930106	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109915100_109915187_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.15	chr9	-	4613	22	FSM	ENSMUSG00000032480.18	ENSMUST00000199529.5	4373	22	-240	0	-41	0	multi-exon	FALSE	canonical	3	162	junction_20	127.405044450657	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946741	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944651_109946425
ES.36211.16	chr9	-	4094	24	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	215.604298682995	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946485	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926311_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
ES.36211.17	chr9	-	3824	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	264	junction_17	80.6220195393422	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930102	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.19	chr9	-	4008	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	160.130247864018	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946536	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
ES.36211.2	chr9	-	2823	1	Antisense	novelGene_ENSMUSG00000032479.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGTAAGTAAAACAAGCA	NA	False	NA	NA	False	AAAAAG	-12	NA	109910886	109908063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109908100_109910900
ES.36211.22	chr9	-	3856	19	NNC	ENSMUSG00000032480.18	novel	3726	21	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	134.498577256232	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930111	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929788
ES.36211.23	chr9	-	3872	18	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_12	149.290455617257	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930111	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917776_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.24	chr9	-	2535	12	NNC	ENSMUSG00000032480.18	novel	3726	21	NA	NA	-767	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	171.090812481859	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109917289	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913952_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497
ES.36211.25	chr9	-	3741	18	NNC	ENSMUSG00000032480.18	novel	4574	18	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	147.785428483231	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930105	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914564_109914640_109914752_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.26	chr9	-	3379	13	NIC	ENSMUSG00000032480.18	novel	4574	18	NA	NA	-1483	0	intron_retention	FALSE	canonical	3	468	junction_7	45.3770469388312	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109922022	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925
ES.36211.27	chr9	-	4055	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946484	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.28	chr9	-	3835	24	NNC	ENSMUSG00000032480.18	novel	3885	23	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	205.743136423199	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946446	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915715_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.3	chr9	-	3854	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-7	1	intron_retention	FALSE	canonical	3	264	junction_17	81.8026572947629	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGTCCTCCCAAGGG	NA	False	NA	0	True	AATAAA	-22	NA	109930114	109913386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.30	chr9	-	3977	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	264	junction_17	81.9860313868195	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930102	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.32	chr9	-	3876	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	169.965364726498	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946484	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914564_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.33	chr9	-	3990	24	NIC	ENSMUSG00000032480.18	novel	3885	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	185.874645239503	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946484	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.35	chr9	-	4158	24	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	187.440031998138	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946483	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109940228_109940362_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.36	chr9	-	4177	24	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	184.164829188472	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946520	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945861_109946425
ES.36211.37	chr9	-	4011	23	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	165.791963636998	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946484	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944280_109944558_109944651_109946425
ES.36211.38	chr9	-	4904	22	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	18	junction_21	161.681190174478	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946418	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944651_109945745
ES.36211.39	chr9	-	4108	22	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_20	148.196137730021	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946692	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944558_109944651_109946425
ES.36211.4	chr9	-	4143	23	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	167.996292019293	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946146	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109945906
ES.36211.40	chr9	-	4336	22	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-25	0	intron_retention	FALSE	canonical	3	120	junction_20	132.876769330325	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946530	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944651_109946425
ES.36211.41	chr9	-	3744	19	NNC	ENSMUSG00000032480.18	novel	3726	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	134.498577256232	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930101	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929890
ES.36211.43	chr9	-	3592	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	147.366666027482	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930102	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.45	chr9	-	3943	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	167.945417392498	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946483	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922146_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.46	chr9	-	1376	9	NIC	ENSMUSG00000032480.18	novel	3726	21	NA	NA	257	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	190.556709078951	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109916265	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187
ES.36211.47	chr9	-	3663	18	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	146.833592226807	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109930103	109913388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914198_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.49	chr9	-	4271	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_23	185.427590461473	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946652	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945824_109946425
ES.36211.5	chr9	-	4176	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	-208	0	2	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946698	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.50	chr9	-	3825	21	NNC	ENSMUSG00000032480.18	novel	3829	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.01951977494	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946500	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914198_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944558_109944651_109946425
ES.36211.51	chr9	-	3849	22	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_16	173.911124903151	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946484	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.52	chr9	-	3946	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.120013213702	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946452	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915728_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.53	chr9	-	3547	17	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.312120656697	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109930112	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109914182_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.54	chr9	-	3873	19	NNC	ENSMUSG00000032480.18	novel	3829	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	134.498577256232	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109930103	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929762
ES.36211.55	chr9	-	3850	22	FSM	ENSMUSG00000032480.18	ENSMUST00000111991.9	3829	22	-21	0	-1	0	multi-exon	FALSE	canonical	3	9	junction_20	148.964330905375	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946500	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ES.36211.56	chr9	-	4063	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	264	junction_15	83.2200296403055	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109930111	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109914122_109914212_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.57	chr9	-	3682	24	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	168.945545527241	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946482	109913389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109916597_109916872_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.59	chr9	-	3952	23	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	168.317488275889	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946484	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927921_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.6	chr9	-	4130	24	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	197.874021903896	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946478	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109945745_109945861_109946425
ES.36211.60	chr9	-	1146	7	NNC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-515	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	229.528260182101	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109915098	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913922_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017
ES.36211.62	chr9	-	4233	14	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-6	0	intron_retention	FALSE	canonical	3	264	junction_13	78.8395119153667	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930113	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.63	chr9	-	4084	24	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	203.599397238218	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946482	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109940228_109940362_109942038_109942094_109944103_109944224_109944558_109944651_109946425
ES.36211.64	chr9	-	2915	12	NNC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_7	169.125802851258	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109920542	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109914122_109914212_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915728_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486
ES.36211.65	chr9	-	4059	23	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_22	167.359957492528	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946714	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946555
ES.36211.67	chr9	-	3618	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	148.151446874719	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930110	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.68	chr9	-	3840	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	171.347045254231	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946482	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915715_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.69	chr9	-	3250	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	148.386372539919	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930114	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.70	chr9	-	3991	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	264	junction_15	85.649258931736	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930103	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109914122_109914212_109914371_109914479_109914640_109914752_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.71	chr9	-	4091	22	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-1	0	intron_retention	FALSE	canonical	3	162	junction_19	136.18246729698	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946480	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.72	chr9	-	4076	24	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	187.238846485633	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946486	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109945745_109945861_109946425
ES.36211.73	chr9	-	3696	19	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	143.601783492484	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930100	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913848_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.74	chr9	-	3971	23	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	165.308701955308	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946483	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913848_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.75	chr9	-	4042	24	NNC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_23	200.660280584272	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946458	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109945745_109945861_109946425
ES.36211.77	chr9	-	4223	24	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	165.413167758957	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946730	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425_109946528_109946574
ES.36211.79	chr9	-	3737	19	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	145.612679630367	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930103	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914933_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.8	chr9	-	4273	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	156.078578694428	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946736	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
ES.36211.80	chr9	-	4169	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	166.366648010495	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946714	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914564_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ES.36211.81	chr9	-	4423	21	NIC	ENSMUSG00000032480.18	novel	4373	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	162	junction_19	128.444336192765	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946483	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944651_109946425
ES.36211.82	chr9	-	4140	15	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	264	junction_14	83.9663744651174	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930111	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.83	chr9	-	3743	19	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_18	132.982408564646	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930102	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927921_109929883
ES.36211.84	chr9	-	3738	19	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	147.195846693956	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930100	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915096_109915193_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.85	chr9	-	4132	24	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	203.684520135702	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946484	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927921_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945861_109946425
ES.36211.86	chr9	-	3893	23	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.272684803179	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946499	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913877_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ES.36211.88	chr9	-	3972	23	NIC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	196.34238100449	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946508	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944558_109944651_109945745_109945861_109946425
ES.36211.89	chr9	-	3627	19	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	146.63843373043	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109930096	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915715_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.9	chr9	-	3653	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_16	149.375377690594	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930113	109913387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109927796_109927928_109929883
ES.36211.90	chr9	-	4072	23	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	161.906181383689	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946482	109913390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944280_109944558_109944651_109946425
ES.36211.91	chr9	-	4124	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	264	junction_15	85.3492172716826	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGCTGTCCTCCC	NA	False	NA	-5	True	AATAAA	-17	NA	109930114	109913391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.92	chr9	-	4111	24	NNC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	199.027379826508	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGCTGTCCTCCC	NA	False	NA	-5	True	AATAAA	-17	NA	109946500	109913391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109945745_109945824_109946425
ES.36211.93	chr9	-	4033	22	NNC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	4	-1	intron_retention	FALSE	canonical	3	46	junction_20	161.639698992078	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGCTGTCCTCCC	NA	False	NA	-5	True	AATAAA	-17	NA	109946483	109913391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944224_109944558_109944651_109946425
ES.36211.94	chr9	-	2194	13	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-535	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	163.914272987098	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109917057	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109916941_109917030
ES.36211.95	chr9	-	3445	17	NNC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-1983	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	142.40918158602	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109922522	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109922364
ES.36211.96	chr9	-	4041	24	NNC	ENSMUSG00000032480.18	novel	4623	23	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	203.033078590387	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109946473	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914564_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945861_109946425
ES.36211.97	chr9	-	5813	17	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	-2	intron_retention	FALSE	canonical	3	468	junction_9	44.3663724007271	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109930102	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796
ES.36211.98	chr9	-	4162	16	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	264	junction_15	83.6854958892055	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109930111	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914640_109914752_109915100_109915187_109915395_109915598_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ES.36211.99	chr9	-	3945	18	NIC	ENSMUSG00000032480.18	novel	3806	19	NA	NA	4	-2	intron_retention	FALSE	canonical	2	7	junction_17	136.493152292844	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTGCTGCTGTCCTCC	NA	False	NA	-6	True	AATAAA	-16	NA	109930102	109913392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927921_109929883
ES.36212.1	chr9	-	193	1	Intergenic	novelGene_29460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAGGTATTAAACCAG	NA	False	NA	NA	False	NA	NA	NA	109955712	109955519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109955500_109955700
ES.36213.1	chr9	-	179	1	Intergenic	novelGene_29461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	109956451	109956272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109956300_109956500
ES.36214.1	chr9	+	3147	25	FSM	ENSMUSG00000032481.18	ENSMUST00000200237.5	3078	25	-61	-8	-4	8	multi-exon	FALSE	canonical	3	1122	junction_24	84.427936069105	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTGTTTGTTTTTT	2441	False	NA	NA	False	ATTAAA	-22	NA	109961043	110042939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576
ES.36214.10	chr9	+	5688	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	260.760384361057	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2466	False	NA	23	True	AATAAA	-23	NA	109961068	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968696_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.102	chr9	+	5172	25	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	15064	11	15007	-11	3prime_fragment	FALSE	canonical	3	994	junction_24	102.658684754655	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTCTAGTCCCATTC	5695	False	NA	13	True	AATAAA	-13	NA	109976111	110069235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.104	chr9	+	5093	24	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	17948	10	17891	-10	3prime_fragment	FALSE	canonical	3	994	junction_23	98.4428672359802	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTCTAGTCCCATTCT	37	False	NA	14	True	AATAAA	-14	NA	109978995	110069236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.105	chr9	+	5009	23	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	21790	1	21733	-1	3prime_fragment	FALSE	canonical	3	994	junction_22	95.6321831958777	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	3879	False	NA	23	True	AATAAA	-23	NA	109982837	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.106	chr9	+	4938	22	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	25295	0	25238	0	3prime_fragment	FALSE	canonical	3	994	junction_21	94.4772465378764	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	7384	False	NA	24	True	AATAAA	-24	NA	109986342	110069246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.107	chr9	+	3659	2	NNC	ENSMUSG00000032481.18	novel	1949	15	NA	NA	-22723	-13021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAATTCCTTGA	NA	False	NA	NA	False	NA	NA	NA	109992076	110000350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109994717_109999331
ES.36214.108	chr9	+	4533	18	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	41900	11	-11852	-11	3prime_fragment	FALSE	canonical	3	994	junction_17	96.8144874628739	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTCTAGTCCCATTC	3159	False	NA	13	True	AATAAA	-13	NA	110002947	110069235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.109	chr9	+	4416	17	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-10691	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	315.745837017291	1637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	291	False	NA	23	True	AATAAA	-23	NA	110004108	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026698_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.11	chr9	+	5784	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	343.268806060623	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2467	False	NA	23	True	AATAAA	-23	NA	109961069	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110006931_110007022_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.111	chr9	+	4358	16	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	45486	2	-8266	-2	3prime_fragment	FALSE	canonical	3	994	junction_15	98.7764254375619	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCCATTCTCTGCATTC	2716	False	NA	22	True	AATAAA	-22	NA	110006533	110069244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.112	chr9	+	4328	15	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	50940	-6	-2812	6	3prime_fragment	FALSE	canonical	3	994	junction_14	101.725947365198	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCATTCATCCATTC	1508	False	NA	30	True	AATAAA	-30	NA	110011987	110069252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.113	chr9	+	2304	14	Fusion	ENSMUSG00000032482.10_ENSMUSG00000032481.18	novel	5717	28	NA	NA	1143	0	multi-exon	TRUE	canonical	0	0	junction_11	521.953941607651	1676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTGTCCACTTCCTT	5463	False	NA	7	True	AATAAA	-8	NA	110015942	110091631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110080026_110080216_110085212_110085289_110091127
ES.36214.114	chr9	+	1738	10	ISM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	55840	1	2145	-1	3prime_fragment	FALSE	canonical	3	1122	junction_7	51.620648562612	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATAGTTCCTGGCTG	6465	False	NA	15	True	ATTAAA	-25	NA	110016944	110064358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.115	chr9	+	3859	11	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	55897	2	2145	-2	3prime_fragment	FALSE	canonical	3	994	junction_10	86.4705730292104	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCCATTCTCTGCATTC	6465	False	NA	22	True	AATAAA	-22	NA	110016944	110069244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.116	chr9	+	2327	2	NNC	ENSMUSG00000032481.18	novel	1280	9	NA	NA	11986	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	NA	False	NA	17	True	AATAAA	-17	NA	110026785	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110026829_110066955
ES.36214.117	chr9	+	174	1	Intergenic	novelGene_29470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1511	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTTTTATTTATTTCA	4561	False	NA	NA	False	NA	NA	NA	110049995	110050169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110050000_110050200
ES.36214.119	chr9	+	2645	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1158	-13	-542	13	multi-exon	FALSE	canonical	3	35	junction_4	8.38152730712011	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCTCCTGTCTGCTCAA	9595	False	NA	33	True	AATAAA	-34	NA	110074008	110091657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
ES.36214.120	chr9	+	5070	4	FSM	ENSMUSG00000032482.10	ENSMUST00000197850.5	7868	4	-112	2910	-64	-2910	multi-exon	FALSE	canonical	3	42	junction_1	7.31816613336672	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGGTTGTTTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	110074486	110088721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212
ES.36214.121	chr9	+	2097	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	-2	12	-2	0	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTGTCCACTTCCTT	NA	False	NA	7	True	AATAAA	-8	NA	110075130	110091631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
ES.36214.122	chr9	+	3938	4	NNC	ENSMUSG00000032482.10	novel	7868	4	NA	NA	787	-2938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5809320861155	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110075919	110088693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110076459_110080026_110080216_110085212_110085963_110086233
ES.36214.123	chr9	+	1202	3	ISM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	4473	0	4473	0	3prime_fragment	FALSE	canonical	3	35	junction_2	4	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTAGTGCCGTGGCC	NA	False	NA	19	True	AATAAA	-20	NA	110079605	110091643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110080216_110085212_110085289_110091127
ES.36214.124	chr9	+	3725	1	ISM	ENSMUSG00000032482.10	ENSMUST00000197850.5	7868	4	11166	2142	10632	-2142	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	3121	False	NA	NA	False	NA	NA	NA	110085764	110089489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110085800_110089500
ES.36214.13	chr9	+	3865	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	26	1826	26	952	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAATGGGCAGAAAGAGA	2471	False	NA	NA	False	AATAGA	-13	NA	109961073	110067420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.14	chr9	+	3397	25	NIC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	27	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	268.652188273032	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCATAGTTCCTGGC	2472	False	NA	13	True	ATTAAA	-23	NA	109961074	110064356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.15	chr9	+	4968	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-26	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTCTAGTCCCATTCT	2476	False	NA	14	True	AATAAA	-14	NA	109961078	110069236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110068142_110068849
ES.36214.17	chr9	+	3590	28	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_27	256.579836737082	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTGGAGTGGTTCTTA	2480	False	NA	NA	False	AATAAA	-26	NA	109961082	110066470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066202
ES.36214.18	chr9	+	5525	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-21	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTAGTCCCATTCTC	2481	False	NA	15	True	AATAAA	-15	NA	109961083	110069237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961179_109961325_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.19	chr9	+	4578	22	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-21	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	289.500140009914	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2481	False	NA	17	True	AATAAA	-17	NA	109961083	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026769_110066989
ES.36214.2	chr9	+	5729	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	-4	-8	-4	8	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCATTCATCCATTCAT	2441	False	NA	32	True	AATAAA	-32	NA	109961043	110069254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.21	chr9	+	5454	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCCATTCTCTGCATTC	2481	False	NA	22	True	AATAAA	-22	NA	109961083	110069244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110068150_110068374
ES.36214.22	chr9	+	5669	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-21	-2110	-21	1	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGGAGTGGTTCTT	2481	False	NA	NA	False	AATAAA	-25	NA	109961083	110066469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.23	chr9	+	1175	8	ISM	ENSMUSG00000032481.18	ENSMUST00000197480.5	1949	15	-21	19141	-21	18104	5prime_fragment	FALSE	canonical	3	1285	junction_2	51.7063924520766	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTCACTCTGGC	2481	False	NA	NA	False	AATAAA	-16	NA	109961083	109994230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869
ES.36214.24	chr9	+	4319	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-21	-760	-21	760	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATCCTTGACTGCCTTC	2481	False	NA	NA	False	AAAAAG	-13	NA	109961083	110065119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.25	chr9	+	6208	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	36	-527	-21	527	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGGCTTTAAACTTTTT	2481	False	NA	NA	False	NA	NA	NA	109961083	110069773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.26	chr9	+	7484	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-21	-3925	-21	-962	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAATCTGAGCCTGTAT	2481	False	NA	NA	False	NA	NA	NA	109961083	110068284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.28	chr9	+	5371	24	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-20	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	272.472131385675	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGCATTCATCCATTC	2482	False	NA	30	True	AATAAA	-30	NA	109961084	110069252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.29	chr9	+	2514	2	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2484	False	NA	23	True	AATAAA	-23	NA	109961086	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961315_110066959
ES.36214.3	chr9	+	3601	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-61	-2	-4	2	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATAGTTCCTGGCTGTTC	2441	False	NA	18	True	ATTAAA	-28	NA	109961043	110064361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.32	chr9	+	4820	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2485	False	NA	17	True	AATAAA	-17	NA	109961087	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110067423_110068272
ES.36214.33	chr9	+	5557	27	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	264.130324655021	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	2485	False	NA	24	True	AATAAA	-24	NA	109961087	110069246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.35	chr9	+	4537	27	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-16	-962	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	261.770635069359	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAATCTGAGCCTGTAT	2486	False	NA	NA	False	NA	NA	NA	109961088	110068284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110066886
ES.36214.36	chr9	+	5669	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	261.030058341994	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2486	False	NA	23	True	AATAAA	-23	NA	109961088	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031621_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.37	chr9	+	8429	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	-15	-4876	-15	-11	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTCTAGTCCCATTC	2487	False	NA	13	True	AATAAA	-13	NA	109961089	110069235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.38	chr9	+	3714	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	42	1961	-15	817	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTCTCTGTCTCTCTC	2487	False	NA	NA	False	NA	NA	NA	109961089	110067285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.4	chr9	+	4758	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	-3	962	-3	-962	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAATCTGAGCCTGTAT	2442	False	NA	NA	False	NA	NA	NA	109961044	110068284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.41	chr9	+	5458	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.44298252159	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCCCATTCTCTGCA	2488	False	NA	19	True	AATAAA	-19	NA	109961090	110069241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961179_109964649_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.42	chr9	+	4836	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCCCATTCTCTGCATT	2490	False	NA	21	True	AATAAA	-21	NA	109961092	110069243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110067423_110068255
ES.36214.44	chr9	+	5574	27	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-11	-11	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	264.254539295849	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTCTAGTCCCATTC	2491	False	NA	13	True	AATAAA	-13	NA	109961093	110069235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.45	chr9	+	4129	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	50	1538	-7	1240	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGCCATTCTGGTTGTCT	2495	False	NA	NA	False	NA	NA	NA	109961097	110067708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.46	chr9	+	3509	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	345.753811583982	1567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATAGTTCCTGGCTGT	2495	False	NA	16	True	ATTAAA	-26	NA	109961097	110064359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961344_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035069_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.47	chr9	+	5653	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	260.579653522496	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCCCATTCTCTGCA	2495	False	NA	19	True	AATAAA	-19	NA	109961097	110069241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014899_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.5	chr9	+	4432	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	6	1279	6	-1279	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTTATAGATTATGTTGA	2451	False	NA	29	True	AAGAAA	-17	NA	109961053	110067967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.52	chr9	+	5673	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	261.129003852405	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	2496	False	NA	24	True	AATAAA	-24	NA	109961098	110069246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063937_110064122_110066886
ES.36214.54	chr9	+	5643	27	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	265.322478790394	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2496	False	NA	17	True	AATAAA	-17	NA	109961098	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004192_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.55	chr9	+	5652	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	259.70298535744	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2497	False	NA	23	True	AATAAA	-23	NA	109961099	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982899_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.56	chr9	+	4690	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	-5	-962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	259.553938351126	1634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAATCTGAGCCTGTAT	2497	False	NA	NA	False	NA	NA	NA	109961099	110068284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000123_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.57	chr9	+	3476	26	NIC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	265.123234741884	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACATGCATAGTTCC	2497	False	NA	9	True	ATTAAA	-19	NA	109961099	110064352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.58	chr9	+	3519	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	261.604776660514	1567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGACATGCATAGTTC	2500	False	NA	8	True	ATTAAA	-18	NA	109961102	110064351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017072_110019993_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.59	chr9	+	1303	10	ISM	ENSMUSG00000032481.18	ENSMUST00000197480.5	1949	15	0	13050	0	-13050	5prime_fragment	FALSE	canonical	3	1205	junction_8	72.5595540841376	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2502	False	NA	NA	False	NA	NA	NA	109961104	110000321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013
ES.36214.6	chr9	+	5675	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	257.692440110272	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2453	False	NA	23	True	AATAAA	-23	NA	109961055	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961344_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.64	chr9	+	5283	27	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	261.770635069359	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAATTCTAGTCCCATT	2509	False	NA	12	True	AATAAA	-12	NA	109961111	110069234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051061_110066903
ES.36214.65	chr9	+	3522	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	258.745013958763	1567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCATAGTTCCTGGC	2509	False	NA	13	True	ATTAAA	-23	NA	109961111	110064356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976189_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.66	chr9	+	5630	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_13	261.769829787511	1569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCTGGAGTGGTTCT	2511	False	NA	NA	False	AATAAA	-24	NA	109961113	110066468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011997_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.74	chr9	+	5660	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	261.155635815063	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2521	False	NA	17	True	AATAAA	-17	NA	109961123	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026670_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.77	chr9	+	5861	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	24	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	343.09713884507	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2526	False	NA	17	True	AATAAA	-17	NA	109961128	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110027924_110028157_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.78	chr9	+	5569	27	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	24	-7	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	264.089731142039	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2526	False	NA	17	True	AATAAA	-17	NA	109961128	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.79	chr9	+	3262	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	24	10056	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	261.770635069359	1556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTACAAGACAGGTCGT	2526	False	NA	NA	False	AATAAA	-4	NA	109961128	110052987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110052824
ES.36214.8	chr9	+	926	7	ISM	ENSMUSG00000032481.18	ENSMUST00000197480.5	1949	15	-42	26867	15	10378	5prime_fragment	FALSE	canonical	3	1285	junction_2	55.0656174234179	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCGTTTGTTTGTTTGT	2460	False	NA	NA	False	GATAAA	-15	NA	109961062	109986504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343
ES.36214.82	chr9	+	4603	18	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	319.114995922845	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCCCATTCTCTGCA	2526	False	NA	19	True	AATAAA	-19	NA	109961128	110069241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982895_110015912_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.83	chr9	+	5533	27	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	422.420889971156	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTAGTCCCATTCTCT	2526	False	NA	16	True	AATAAA	-16	NA	109961128	110069238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110033283_110033395_110035077_110035198_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.84	chr9	+	5690	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_20	261.81848131819	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCTGGAGTGGTTCT	2526	False	NA	NA	False	AATAAA	-24	NA	109961128	110066468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025547_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.85	chr9	+	5656	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	25	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	256.937700945876	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTCTAGTCCCATTCT	2527	False	NA	14	True	AATAAA	-14	NA	109961129	110069236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066855
ES.36214.86	chr9	+	5563	27	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_18	349.422744591519	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTAGTCCCATTCTC	2527	False	NA	15	True	AATAAA	-15	NA	109961129	110069237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035069_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.87	chr9	+	5552	29	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	256.451252478827	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2528	False	NA	23	True	AATAAA	-23	NA	109961130	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886_110067010_110067090
ES.36214.89	chr9	+	5440	28	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	256.937700945876	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTAGTCCCATTCTC	2529	False	NA	15	True	AATAAA	-15	NA	109961131	110069237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064033_110066981
ES.36214.9	chr9	+	3358	27	NNC	ENSMUSG00000032481.18	novel	3538	27	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.254805161149	1567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGACATGCATAGTTC	2463	False	NA	8	True	ATTAAA	-18	NA	109961065	110064351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961179_109964649_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.90	chr9	+	3078	14	NNC	ENSMUSG00000032481.18	novel	1949	15	NA	NA	32	-2212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	361.101765721383	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCCTCCTGCCTGTGTC	2534	False	NA	NA	False	NA	NA	NA	109961136	110011159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110009389
ES.36214.92	chr9	+	5479	27	NIC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	45	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	265.200217430989	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCATTCTCTGCATTCA	2547	False	NA	23	True	AATAAA	-23	NA	109961149	110069245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110050959_110051225_110063944_110064122_110066886
ES.36214.93	chr9	+	8014	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	45	-4521	45	-366	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCAAGTGGGAATAGTT	2547	False	NA	NA	False	NA	NA	NA	109961149	110068880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ES.36214.96	chr9	+	6751	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	107	-1141	50	1141	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTAGTAGTGCCTCG	2552	False	NA	NA	False	NA	NA	NA	109961154	110070387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.98	chr9	+	5263	25	NNC	ENSMUSG00000032481.18	novel	5717	28	NA	NA	62	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	270.519292287999	1645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	2564	False	NA	17	True	AATAAA	-17	NA	109961166	110069239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961377_109979038_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36214.99	chr9	+	5543	28	NNC	ENSMUSG00000032481.18	novel	1280	9	NA	NA	420	-9	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	257.692440110272	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTAGTCCCATTCTC	2922	False	NA	15	True	AATAAA	-15	NA	109961524	110069237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_109961689_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ES.36215.1	chr9	-	344	1	Intergenic	novelGene_29462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAAAACATGCCG	NA	False	NA	NA	False	NA	NA	NA	109977518	109977174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109977200_109977500
ES.36216.1	chr9	-	177	1	Intergenic	novelGene_29463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGCACTTTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	109981802	109981625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109981600_109981800
ES.36217.1	chr9	-	215	1	Intergenic	novelGene_29464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATCTAACTGGTTAG	NA	False	NA	NA	False	NA	NA	NA	109983357	109983142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109983100_109983400
ES.36218.1	chr9	-	4460	1	Antisense	novelGene_ENSMUSG00000032481.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGGAAAAAAAAGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	109988124	109983664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_109983700_109988100
ES.36219.1	chr9	-	163	1	Intergenic	novelGene_29465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	109998032	109997869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109997900_109998000
ES.3622.1	chr10	-	3846	3	NNC	ENSMUSG00000097164.3	novel	6566	3	NA	NA	0	-2678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCATTTCTATACCT	NA	False	NA	-2	True	AATAAA	-26	NA	94524438	94509564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_94512992_94514192_94514310_94524136
ES.3622.2	chr10	-	3893	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	-11	2684	-11	-2684	multi-exon	FALSE	canonical	3	9	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACATATCTCCATTTCT	NA	False	NA	-8	True	AATAAA	-20	NA	94524449	94509570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_94512992_94514192_94514310_94524094
ES.3622.3	chr10	-	4639	2	NNC	ENSMUSG00000097164.3	novel	6566	3	NA	NA	10031	-2690	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACCACATATCTCC	NA	False	NA	-14	True	AATAAA	-14	NA	94514407	94509576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_94513742_94513933
ES.3622.4	chr10	-	359	2	Genic_Genomic	ENSMUSG00000097164.3	novel	6566	3	NA	NA	1	-14680	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGTTTATGTATTT	NA	False	NA	NA	False	NA	NA	NA	94524437	94521566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_94521857_94524368
ES.36220.1	chr9	-	137	1	Intergenic	novelGene_29466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	109998779	109998642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_109998600_109998800
ES.36221.1	chr9	-	894	8	Antisense	novelGene_ENSMUSG00000032481.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAAATTAAAACAAGTTG	NA	False	NA	NA	False	NA	NA	NA	110025441	110006534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110006572_110011987_110012111_110012883_110012957_110014890_110015003_110015823_110015978_110016945_110017060_110019968_110020025_110025216
ES.36221.2	chr9	-	107	1	Intergenic	novelGene_29467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110009488	110009381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110009400_110009500
ES.36222.1	chr9	-	3618	1	Intergenic	novelGene_29468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCATCCAACCCAATTGT	NA	False	NA	NA	False	NA	NA	NA	110040902	110037284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110037300_110040900
ES.36223.1	chr9	-	181	1	Intergenic	novelGene_29469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAATAGGGGGC	NA	False	NA	NA	False	NA	NA	NA	110049606	110049425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110049400_110049600
ES.36224.1	chr9	-	4667	1	Intergenic	novelGene_29471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCCCCCCCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	110059138	110054471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110054500_110059100
ES.36224.2	chr9	-	4529	1	Intergenic	novelGene_29472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	110059138	110054609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110054600_110059100
ES.36225.1	chr9	-	157	1	Intergenic	novelGene_29473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110063529	110063372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110063400_110063500
ES.36226.1	chr9	+	177	1	Intergenic	novelGene_29474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATATTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	110098365	110098542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110098400_110098500
ES.36227.1	chr9	-	175	1	Intergenic	novelGene_29475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	110101268	110101093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110101100_110101300
ES.36228.1	chr9	-	176	1	Intergenic	novelGene_29476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGAATCAAGGT	NA	False	NA	NA	False	NA	NA	NA	110119972	110119796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110119800_110120000
ES.36229.1	chr9	+	1306	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	0	-2	0	2	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2182	False	NA	9	True	AATAAA	-19	NA	110134240	110150393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.10	chr9	+	2094	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTGTGTTCCTGTG	2252	False	NA	9	True	AATAAA	-17	NA	110134310	110151173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.11	chr9	+	2108	7	NIC	ENSMUSG00000054836.13	novel	567	5	NA	NA	-29	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	57.0129127673918	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTGTGTGTGTGTTCC	2476	False	NA	5	True	AATAAA	-13	NA	110134534	110151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110134738_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.12	chr9	+	733	2	ISM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	14316	4	9842	-4	3prime_fragment	FALSE	canonical	3	125	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTTCCTGGAGGTTGT	NA	False	NA	3	True	AATAAA	-13	NA	110148556	110150387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110148785_110149882
ES.36229.13	chr9	+	2399	1	NIC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	10056	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTGTGTGTGTGTTCC	NA	False	NA	5	True	AATAAA	-13	NA	110148770	110151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110148800_110151200
ES.36229.2	chr9	+	1383	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2183	False	NA	9	True	AATAAA	-19	NA	110134241	110150393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.3	chr9	+	1152	6	NIC	ENSMUSG00000054836.13	novel	1304	7	NA	NA	7	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	63.373811625939	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2189	False	NA	9	True	AATAAA	-19	NA	110134247	110150393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110149882
ES.36229.4	chr9	+	2274	9	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.0418010751417	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTGTGTGTGTGTTCC	2204	False	NA	5	True	AATAAA	-13	NA	110134262	110151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110136274_110136411_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.5	chr9	+	1177	7	NNC	ENSMUSG00000054836.13	novel	1304	7	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	57.1596205570175	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2205	False	NA	9	True	AATAAA	-19	NA	110134263	110150393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149988
ES.36229.6	chr9	+	2059	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	23	-778	-8	-1	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTGTGTGTGTGTTCC	2205	False	NA	5	True	AATAAA	-13	NA	110134263	110151169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ES.36229.7	chr9	+	1307	7	NNC	ENSMUSG00000054836.13	novel	1304	7	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.854462998881	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGAGGTTGTCTTTTT	2205	False	NA	9	True	AATAAA	-19	NA	110134263	110150393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148613_110148785_110149882
ES.36229.8	chr9	+	2009	7	NIC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	57.1605924858493	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTGTGTTCCTGTG	2213	False	NA	9	True	AATAAA	-17	NA	110134271	110151173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144864_110145021_110148637_110148785_110149882
ES.36229.9	chr9	+	1235	7	NNC	ENSMUSG00000054836.13	novel	1304	7	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.854462998881	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGCTTCCTGGAGGTT	2232	False	NA	1	True	AATAAA	-11	NA	110134290	110150385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148650_110148785_110149882
ES.3623.1	chr10	+	3958	7	FSM	ENSMUSG00000020024.8_ENSMUSG00000112203.2	ENSMUST00000220052.2	3910	7	-63	15	-47	-15	multi-exon	TRUE	canonical	3	151	junction_6	27.6872413456692	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTAGTTTTGGTTTT	9457	False	NA	NA	False	AATAAA	-2	NA	94524468	94578540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918
ES.3623.10	chr10	+	3028	17	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.1238003728284	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGGAAAAGATAATCAT	9501	False	NA	NA	False	AATAAA	-24	NA	94524512	94626061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94615663_94615704_94622605_94622710_94624508_94624699_94625565
ES.3623.12	chr10	+	5016	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTTGGAAAAGATAAT	9502	False	NA	NA	False	AATAAA	-21	NA	94524513	94626058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.13	chr10	+	3166	17	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-1	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.1238003728284	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9503	False	NA	9	True	AATAAA	-18	NA	94524514	94626201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94615663_94615704_94622605_94622710_94624508_94624699_94625565
ES.3623.14	chr10	+	3080	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.1121180484264	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9504	False	NA	9	True	AATAAA	-18	NA	94524515	94626201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573842_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.15	chr10	+	7314	14	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_11	60.4777821201928	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTTTGGAAAAGATAA	9504	False	NA	NA	False	AATAAA	-20	NA	94524515	94626057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.17	chr10	+	5156	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	145	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTGTTTAATTTTCC	9504	False	NA	8	True	AATAAA	-17	NA	94524515	94626200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.18	chr10	+	2187	12	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	-148	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	85.3685253706947	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCAAGTTTTCAAA	9504	False	NA	NA	False	AATAAA	-16	NA	94524515	94625907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.2	chr10	+	3165	16	FSM	ENSMUSG00000020024.8_ENSMUSG00000112203.2	ENSMUST00000020212.6	3639	16	-39	513	-39	147	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTTTAATTTTCCTG	9465	False	NA	10	True	AATAAA	-19	NA	94524476	94626202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.20	chr10	+	3177	18	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	1	144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.7513146254796	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGTTTAATTTTC	9505	False	NA	7	True	AATAAA	-16	NA	94524516	94626199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561606_94564485_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94615663_94615704_94621295_94621340_94622605_94622710_94624508_94624699_94625565
ES.3623.24	chr10	+	5091	15	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	4	141	intron_retention	FALSE	canonical	0	0	junction_12	74.1570314004171	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTGTGTTTAATT	9524	False	NA	4	True	AATAAA	-13	NA	94524535	94626196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625606
ES.3623.25	chr10	+	1885	4	FSM	ENSMUSG00000020024.8	ENSMUST00000220352.2	1842	4	-43	0	5	0	multi-exon	FALSE	canonical	3	8	junction_3	88.9044430835715	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAAGAAAAG	9525	False	NA	NA	False	CATAAA	-34	NA	94524536	94557635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94556541
ES.3623.26	chr10	+	4144	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	5	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	74.6823197878112	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9525	False	NA	9	True	AATAAA	-18	NA	94524536	94626201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94574927_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.27	chr10	+	3751	7	FSM	ENSMUSG00000020024.8	ENSMUST00000220052.2	3910	7	5	154	5	-154	multi-exon	FALSE	canonical	3	151	junction_6	27.6872413456692	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCTTCACATTGTAGAA	9525	False	NA	NA	False	AATAAA	-18	NA	94524536	94578401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918
ES.3623.29	chr10	+	2795	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	43	801	-21	-141	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTTCAAATTAATTT	9547	False	NA	NA	False	AATAAA	-23	NA	94524558	94625914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.30	chr10	+	2081	12	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	60	21801	-4	-21141	5prime_fragment	FALSE	canonical	3	151	junction_6	28.2040967658985	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATTTGTGGGAAGTT	9564	False	NA	NA	False	TATAAA	-25	NA	94524575	94604914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680
ES.3623.31	chr10	+	2768	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-4	-148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.1305045183297	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCAAGTTTTCAAA	9564	False	NA	NA	False	AATAAA	-16	NA	94524575	94625907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606934_94622605_94622710_94624508_94624699_94625565
ES.3623.32	chr10	+	3578	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	68	-7	4	7	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATTTGTTACATCAAAA	9572	False	NA	NA	False	ATTAAA	-20	NA	94524583	94626722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.33	chr10	+	4975	11	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	7	-20268	intron_retention	FALSE	canonical	3	176	junction_2	24.204131878669	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGTAGCTAACAGCT	9575	False	NA	NA	False	ATTAAA	-24	NA	94524586	94605787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680
ES.3623.34	chr10	+	2936	12	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	72	20934	8	-20274	5prime_fragment	FALSE	canonical	3	151	junction_6	28.2040967658985	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACATACAGTGTAGCTA	9576	False	NA	NA	False	ATTAAA	-18	NA	94524587	94605781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680
ES.3623.35	chr10	+	4836	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	25	141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.1677826968147	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTGTGTTTAATT	9593	False	NA	4	True	AATAAA	-13	NA	94524604	94626196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94575692_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.36	chr10	+	2377	12	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	37	143	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	85.3685253706947	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGTGTTTAATTTT	9605	False	NA	6	True	AATAAA	-15	NA	94524616	94626198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.38	chr10	+	5083	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	50	146	intron_retention	FALSE	canonical	0	0	junction_12	66.6501979658642	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9618	False	NA	9	True	AATAAA	-18	NA	94524629	94626201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94615663_94615704_94622605_94622710_94624508_94624699_94625565
ES.3623.4	chr10	+	2898	3	ISM	ENSMUSG00000020024.8	ENSMUST00000220352.2	1842	4	-93	-26	-29	26	intron_retention	FALSE	canonical	3	176	junction_2	18	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGTGACTGTACTTCC	9475	False	NA	NA	False	AATAAA	-18	NA	94524486	94557661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94524909_94554713_94554982_94555453
ES.3623.40	chr10	+	3035	17	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	54	22756	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	73.1987875582649	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	9622	False	NA	NA	False	NA	NA	NA	94524633	94649471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565_94626197_94649438
ES.3623.41	chr10	+	2592	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	57	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.7860750352385	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTTTGGAAAAGATAA	9625	False	NA	NA	False	AATAAA	-20	NA	94524636	94626057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.42	chr10	+	4221	17	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	79	145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.1238003728284	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTGTTTAATTTTCC	9647	False	NA	8	True	AATAAA	-17	NA	94524658	94626200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94614463_94615704_94622605_94622710_94624508_94624699_94625565
ES.3623.43	chr10	+	4718	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	88	-141	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTTCAAATTAATTT	9656	False	NA	NA	False	AATAAA	-23	NA	94524667	94625914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.44	chr10	+	5522	14	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	151	-141	intron_retention	FALSE	canonical	0	0	junction_12	60.5231629579772	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTTCAAATTAATTT	9719	False	NA	NA	False	AATAAA	-23	NA	94524730	94625914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508
ES.3623.45	chr10	+	2528	16	NNC	ENSMUSG00000020024.8	novel	1692	10	NA	NA	399	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1533543274461	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTTCAAATTAATTT	9967	False	NA	NA	False	AATAAA	-23	NA	94524978	94625914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94525062_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.46	chr10	+	5075	1	Intergenic	novelGene_2763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94541660	94546735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_94541700_94546700
ES.3623.49	chr10	+	3436	9	ISM	ENSMUSG00000020024.8	ENSMUST00000218076.2	1692	10	7151	-143	7151	143	3prime_fragment	FALSE	canonical	0	0	junction_1	99.4741643593953	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGTGTTTAATTTT	6834	False	NA	6	True	AATAAA	-15	NA	94583096	94626198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94584918_94586091_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.5	chr10	+	2526	8	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	71.7464355937503	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTTTGAGGTAGGATC	9483	False	NA	NA	False	AATAAA	-15	NA	94524494	94578553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94577469
ES.3623.51	chr10	+	1035	1	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	49219	144	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTGTTTAATTTTC	NA	False	NA	7	True	AATAAA	-16	NA	94625164	94626199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_94625200_94626200
ES.3623.6	chr10	+	3753	12	ISM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	-21	20210	-21	-19550	5prime_fragment	FALSE	canonical	3	151	junction_6	28.2040967658985	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACTTAGATGCTCTAA	9483	False	NA	NA	False	AGTAAA	-14	NA	94524494	94606505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680
ES.3623.7	chr10	+	3002	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	-17	654	-17	6	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGGAAAAGATAATCAT	9487	False	NA	NA	False	AATAAA	-24	NA	94524498	94626061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ES.3623.8	chr10	+	3100	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	-16	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	72.0359786649853	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTAATTTTCCT	9488	False	NA	9	True	AATAAA	-18	NA	94524499	94626201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625606
ES.36230.1	chr9	-	177	1	Intergenic	novelGene_29477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAACC	NA	False	NA	NA	False	NA	NA	NA	110137782	110137605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110137600_110137800
ES.36231.1	chr9	+	177	1	Intergenic	novelGene_29478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGTACATCTT	NA	False	NA	NA	False	NA	NA	NA	110160216	110160393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110160200_110160400
ES.36232.1	chr9	+	4140	23	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	21.4736528936053	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGGCTGAAGTTCTTG	NA	False	NA	10	True	AATAAA	-22	NA	110162353	110214017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.10	chr9	+	4242	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	-19	4	-19	-4	multi-exon	FALSE	canonical	3	36	junction_1	22.4939385774762	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110162404	110214014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.11	chr9	+	4063	22	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-15	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	31.5705307636475	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTACCAGGGGCTGAAGT	NA	False	NA	5	True	AATAAA	-17	NA	110162408	110214012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.12	chr9	+	5272	21	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	36	junction_1	22.6831986280595	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTACCAGGGGCTGAAGT	NA	False	NA	5	True	AATAAA	-17	NA	110162408	110214012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.13	chr9	+	4353	24	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.0228434325571	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTACCAGGGGCTGAA	NA	False	NA	3	True	AATAAA	-15	NA	110162410	110214010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162574_110163037_110163159_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.14	chr9	+	4035	22	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.456553200073	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	NA	False	NA	6	True	AATAAA	-18	NA	110162414	110214013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162574_110182013_110182167_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.15	chr9	+	4243	23	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	29.1452617245366	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110162419	110214003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212994_110213133_110213215_110213334_110213542_110213623
ES.36232.16	chr9	+	4567	22	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	36	junction_1	23.0165079277507	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110162419	110214014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.18	chr9	+	5881	20	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	11	-10	intron_retention	FALSE	canonical	0	0	junction_3	38.2945285142332	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTTACCAGGGGCTG	NA	False	NA	1	True	AATAAA	-13	NA	110162434	110214008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162574_110182013_110182233_110191461_110191592_110193605_110193790_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110206802_110207411_110207511_110207636_110207856_110208523_110209458_110209561_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.19	chr9	+	4284	22	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	19	-7	intron_retention	FALSE	canonical	3	36	junction_1	22.7264118575363	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTACCAGGGGCTGAAG	NA	False	NA	4	True	AATAAA	-16	NA	110162442	110214011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.2	chr9	+	4065	24	NNC	ENSMUSG00000032485.15	novel	619	5	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.4347025872663	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110162364	110214003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162418_110182013_110182036_110184617_110184765_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.21	chr9	+	4808	20	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	74	-6	intron_retention	FALSE	canonical	3	36	junction_1	23.6406617171896	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTACCAGGGGCTGAAGT	NA	False	NA	5	True	AATAAA	-17	NA	110162497	110214012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.22	chr9	+	6034	19	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	74	0	intron_retention	FALSE	canonical	3	36	junction_1	21.6815475963511	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110162497	110214018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110206802_110207411_110207511_110207636_110208901_110209268_110209458_110209561_110209764_110209840_110210554_110210630_110210717_110212616_110212700_110212799_110213215_110213334_110213542_110213623
ES.36232.23	chr9	+	4235	23	NIC	ENSMUSG00000032485.15	novel	597	4	NA	NA	-32	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	27.2204423060839	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	NA	False	NA	6	True	AATAAA	-18	NA	110162671	110214013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162835_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.24	chr9	+	5072	1	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	5533	1487	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCACTACATTCTTATT	NA	False	NA	NA	False	NA	NA	NA	110178799	110183871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110178800_110183900
ES.36232.25	chr9	+	4074	22	ISM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	19588	5	-8240	-5	3prime_fragment	FALSE	canonical	3	74	junction_11	17.7776643987314	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	NA	False	NA	6	True	AATAAA	-18	NA	110182011	110214013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.26	chr9	+	4153	22	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-8240	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.9317275852335	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110182011	110214003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208434_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.27	chr9	+	3938	22	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-8240	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4328384769244	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110182011	110214014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110182096_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.28	chr9	+	3251	19	NNC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-1177	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.5660588008543	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	4478	False	NA	6	True	AATAAA	-18	NA	110202200	110214013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208744_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.29	chr9	+	3676	16	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-382	-4	intron_retention	FALSE	canonical	3	74	junction_6	20.3306009093025	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	5273	False	NA	7	True	AATAAA	-19	NA	110202995	110214014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.3	chr9	+	4113	23	NNC	ENSMUSG00000032485.15	novel	619	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.1600756844086	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCAGGGGCTGAAGTT	NA	False	NA	6	True	AATAAA	-18	NA	110162364	110214013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203076_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.30	chr9	+	4008	11	NIC	ENSMUSG00000032485.15	novel	4227	23	NA	NA	-635	-6	intron_retention	FALSE	canonical	3	77	junction_2	18.9462397324641	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTACCAGGGGCTGAAGT	9003	False	NA	5	True	AATAAA	-17	NA	110206725	110214012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110206802_110207411_110207511_110207636_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110213215_110213334_110213542_110213623
ES.36232.5	chr9	+	4180	24	NNC	ENSMUSG00000032485.15	novel	619	5	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.4347025872663	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTACCAGGGGCTGA	NA	False	NA	2	True	AATAAA	-14	NA	110162383	110214009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162418_110182013_110182233_110189750_110189829_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.6	chr9	+	7184	15	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	20	-4	intron_retention	FALSE	canonical	3	44	junction_1	23.5117209154958	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAGGGGCTGAAGTTC	NA	False	NA	7	True	AATAAA	-19	NA	110162383	110214014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110203705_110205630_110206802_110207411_110207511_110207636_110209458_110209561_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.7	chr9	+	6072	20	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	21	-9	intron_retention	FALSE	canonical	3	44	junction_1	22.1320639536317	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTACCAGGGGCTGA	NA	False	NA	2	True	AATAAA	-14	NA	110162384	110214009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203705_110205630_110206802_110207411_110207511_110207636_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36232.8	chr9	+	6005	19	NNC	ENSMUSG00000032485.15	novel	619	5	NA	NA	28	-7	intron_retention	FALSE	canonical	0	0	junction_4	32.7457470615236	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTACCAGGGGCTGAAG	NA	False	NA	4	True	AATAAA	-16	NA	110162391	110214011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202048_110202265_110202457_110203238_110203577_110203705_110205630_110206802_110207411_110207511_110207636_110207856_110208523_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334
ES.36232.9	chr9	+	5333	20	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	29	-15	intron_retention	FALSE	canonical	3	44	junction_1	21.8785365166595	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCACATTTACCAGG	NA	False	NA	-4	True	AATAAA	-8	NA	110162392	110214003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110208901_110209268_110209458_110209561_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ES.36233.1	chr9	+	1419	1	Intergenic	novelGene_29480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110224674	110226093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110224700_110226100
ES.36234.1	chr9	-	176	1	Intergenic	novelGene_29479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	110188307	110188131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110188100_110188300
ES.36235.1	chr9	-	2273	6	ISM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	20536	-132	-1028	132	3prime_fragment	FALSE	canonical	3	78	junction_2	13.5410487038486	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGGTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110216745	110214017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798
ES.36235.10	chr9	-	1562	1	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	0	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110215717	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214200_110215700
ES.36235.11	chr9	-	5614	22	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	11	-6	intron_retention	FALSE	canonical	3	45	junction_21	14.512173324598	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110237270	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.12	chr9	-	5366	24	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	51	-6	intron_retention	FALSE	canonical	3	45	junction_23	14.8271706858795	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110237230	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.13	chr9	-	6125	19	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	24	-6	intron_retention	FALSE	canonical	3	45	junction_18	15.5094554990349	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110237257	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110217720_110217808_110217989_110218079_110218232_110218308_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.14	chr9	-	5400	24	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	21	-6	intron_retention	FALSE	canonical	3	45	junction_23	14.4244331677789	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110237260	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.15	chr9	-	3384	21	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	12	-6	intron_retention	FALSE	canonical	1	1	junction_4	20.8932405337229	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	False	NA	-9	True	AATAAA	-15	NA	110237269	110214155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110217808_110217989_110218079_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.19	chr9	-	5449	25	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	-61	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	20.3585908702499	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTGAGTTCACCTA	NA	False	NA	-10	True	AATAAA	-14	NA	110237342	110214156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222565_110222768_110222897_110227188_110227264_110237101
ES.36235.2	chr9	-	5398	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	-53	1	-53	-1	multi-exon	FALSE	canonical	3	45	junction_24	14.8742413438654	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTCACCTACTGCTG	NA	False	NA	-4	True	AATAAA	-20	NA	110237334	110214150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.22	chr9	-	2041	7	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.9830214883596	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTGAGTTCACCTA	NA	False	NA	-10	True	AATAAA	-14	NA	110237270	110214156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214457_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216891_110237164
ES.36235.23	chr9	-	5414	24	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	29	-7	intron_retention	FALSE	canonical	3	45	junction_23	14.3521732544815	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTGAGTTCACCTA	NA	False	NA	-10	True	AATAAA	-14	NA	110237252	110214156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.24	chr9	-	5073	19	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	-2277	-7	intron_retention	FALSE	canonical	0	0	junction_4	21.5100464612569	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTGAGTTCACCTA	NA	False	NA	-10	True	AATAAA	-14	NA	110221820	110214156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110217718_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770
ES.36235.25	chr9	-	5864	22	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	16	-8	intron_retention	FALSE	canonical	3	45	junction_21	15.5459964149985	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCTTGAGTTCACCT	NA	False	NA	-11	True	AATAAA	-13	NA	110237265	110214157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.26	chr9	-	5453	24	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	36	-9	intron_retention	FALSE	canonical	0	0	junction_9	20.7877017590555	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTTGAGTTCACC	NA	False	NA	-12	True	AATAAA	-12	NA	110237245	110214158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218464_110218540_110218859_110219035_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.27	chr9	-	2223	7	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	34	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.3765034053577	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTTGAGTTCACC	NA	False	NA	-12	True	AATAAA	-12	NA	110237247	110214158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216778_110237188
ES.36235.28	chr9	-	5384	24	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	39	-9	intron_retention	FALSE	canonical	3	45	junction_23	15.1627590747833	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTTGAGTTCACC	NA	False	NA	-12	True	AATAAA	-12	NA	110237242	110214158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.3	chr9	-	5267	25	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	19.8273362782016	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTCACCTACTGCT	NA	False	NA	-5	True	AATAAA	-19	NA	110237279	110214151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221610_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.4	chr9	-	5279	26	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	23	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	19.9579558071462	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTCACCTACTGCT	NA	False	NA	-5	True	AATAAA	-19	NA	110237258	110214151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216813_110216854_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.5	chr9	-	3890	25	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	84	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.2206148247003	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGTTCACCTACTGCT	NA	False	NA	-5	True	AATAAA	-19	NA	110237197	110214151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216350_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.6	chr9	-	1759	8	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	736	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	33.1914668158513	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGAGTTCACCTACTG	NA	False	NA	-7	True	AATAAA	-17	NA	110218807	110214153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110217808_110217989_110218079_110218232_110218308_110218464_110218540
ES.36235.7	chr9	-	5454	23	NIC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	56	-5	intron_retention	FALSE	canonical	3	45	junction_22	15.01101523923	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGTTCACCTACT	NA	False	NA	-8	True	AATAAA	-16	NA	110237225	110214154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110217720_110217808_110217989_110218079_110218232_110218308_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36235.8	chr9	-	3000	7	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.3765034053577	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGTTCACCTACT	NA	False	NA	-8	True	AATAAA	-16	NA	110237270	110214154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217505_110237165
ES.36235.9	chr9	-	3959	25	NNC	ENSMUSG00000036057.12	novel	5346	25	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	19.8093342195598	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGAGTTCACCTACT	NA	False	NA	-8	True	AATAAA	-16	NA	110237300	110214154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216319_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ES.36236.1	chr9	-	210	1	Intergenic	novelGene_29481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTCCCTGACCTCC	NA	False	NA	NA	False	NA	NA	NA	110243814	110243604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110243600_110243800
ES.36237.1	chr9	+	168	1	Intergenic	novelGene_29482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	110292252	110292420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110292300_110292400
ES.36238.1	chr9	+	242	1	Intergenic	novelGene_29483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTATCTCTTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	110301450	110301692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110301400_110301700
ES.36239.1	chr9	-	2742	1	Genic_Genomic	ENSMUSG00000054792.16	novel	NA	NA	NA	NA	4353	475	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110257260	110254518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_110254500_110257300
ES.36239.2	chr9	-	4465	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	77	-4	-22	2	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTTTCCTGATTGTG	2040	False	NA	0	True	AATAAA	-19	NA	110305680	110254991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ES.36239.3	chr9	-	4539	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	-9	0	-9	0	multi-exon	FALSE	canonical	1	6	junction_9	1.68508343201146	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCAGTTTCCTGATTG	1949	False	NA	-2	True	AATAAA	-17	NA	110305771	110254993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ES.36239.4	chr9	-	3726	6	NIC	ENSMUSG00000054792.16	novel	4538	10	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.99332590941915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCAGTTTCCTGAT	2040	False	NA	-4	True	AATAAA	-15	NA	110305680	110254995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110258086_110259013_110259126_110261501_110261607_110279787_110279929_110284424_110284556_110305533
ES.36239.6	chr9	-	3765	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	-12	785	-7	-785	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCTGGTAACTGATAC	1951	False	NA	NA	False	NA	NA	NA	110305769	110255780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ES.3624.1	chr10	+	2909	2	Antisense	novelGene_ENSMUSG00000074785.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5914	False	NA	NA	False	NA	NA	NA	94731565	94734931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_94732977_94733433
ES.36240.1	chr9	+	3176	21	NIC	ENSMUSG00000032489.18	novel	2956	21	NA	NA	-200	15	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	1.07121426428143	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTCGGGACTTCTCTGG	618	False	NA	NA	False	NA	NA	NA	110305825	110353317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110306152_110312128_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110343496_110343692_110346572_110346788_110348102_110348280_110348567_110348684_110350327_110350433_110352794
ES.36240.2	chr9	+	3347	21	NIC	ENSMUSG00000032489.18	novel	2956	21	NA	NA	-176	210	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	1.07121426428143	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCCTGTCAGATTTTAT	642	False	NA	NA	False	AATAAA	-27	NA	110305849	110353512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110306152_110312128_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110343496_110343692_110346572_110346788_110348102_110348280_110348567_110348684_110350327_110350433_110352794
ES.36240.3	chr9	+	1637	12	NNC	ENSMUSG00000032489.18	novel	3184	20	NA	NA	26269	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.20604537831105	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAGGACATCTTCCTT	3157	False	NA	NA	False	GATAAA	-19	NA	110332330	110354240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110332416_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110343496_110343692_110346572_110346788_110348102_110348280_110348567_110348684_110350327_110350433_110353951
ES.36241.1	chr9	+	8323	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3425	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCAGGTTTGTTTGTGT	NA	False	NA	37	True	AATAAA	-38	NA	110358239	110447699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.11	chr9	+	8557	19	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	37.8641577807357	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110358263	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433191_110433300_110443937_110444019_110446501
ES.36241.12	chr9	+	8292	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTCCCTCAAAAT	NA	False	NA	18	True	AATAAA	-19	NA	110358263	110447680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358374_110376251_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.13	chr9	+	8263	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110358263	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358396_110376274_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.14	chr9	+	8672	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.4812076994788	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAATGTGTGCTCCCTC	NA	False	NA	13	True	AATAAA	-14	NA	110358263	110447675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402496_110403343_110406189_110406407_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.15	chr9	+	8498	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3720131690719	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGCTCCCTCAAAATT	NA	False	NA	19	True	AATAAA	-20	NA	110358263	110447681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110406189_110406407_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.16	chr9	+	10445	22	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3400	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.3222365868224	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGAATGTGTGCTCCCT	NA	False	NA	12	True	AATAAA	-13	NA	110358264	110447674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358397_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110406189_110406407_110407019_110408971_110419458_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.17	chr9	+	8281	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3399	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAATTAATCAGGTTTG	NA	False	NA	30	True	AATAAA	-31	NA	110358265	110447692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358374_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.18	chr9	+	3589	16	NNC	ENSMUSG00000044791.17	novel	2910	10	NA	NA	-3399	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8108743911354	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTGCTCCCTCAAA	NA	False	NA	16	True	AATAAA	-17	NA	110358265	110447678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358374_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.19	chr9	+	8302	21	Fusion	ENSMUSG00000044791.17_ENSMUSG00000104983.2	novel	7442	19	NA	NA	-3399	2	multi-exon	FALSE	non_canonical	0	0	junction_1	30.9293954030789	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGTGTGCTCCCTCAA	NA	False	NA	15	True	AATAAA	-16	NA	110358265	110447677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_110358374_110374343_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.23	chr9	+	8488	20	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-154	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTAATCAGGTTTGT	NA	False	NA	31	True	AATAAA	-32	NA	110361510	110447693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110361825_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.26	chr9	+	8560	22	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.3469364232553	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAATGTGTGCTCCCTC	NA	False	NA	13	True	AATAAA	-14	NA	110361575	110447675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110361821_110366429_110366580_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.27	chr9	+	8422	21	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-70	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.9293954030789	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110361594	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110361821_110374343_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.29	chr9	+	8245	20	NIC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-55	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	38.2276313751456	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110361609	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110361821_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.3	chr9	+	9818	19	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3403	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	32.4328365840685	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTGGAATGTGTGCTC	NA	False	NA	9	True	AATAAA	-10	NA	110358261	110447671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.32	chr9	+	8935	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	184	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.6141908596743	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110361848	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110362628_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.33	chr9	+	9087	22	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	185	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	38.0320905196789	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTCCCTCAAAAT	NA	False	NA	18	True	AATAAA	-19	NA	110361849	110447680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110362614_110366429_110366580_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.34	chr9	+	12468	20	ISM	ENSMUSG00000044791.17	ENSMUST00000153838.8	8350	21	8407	22	-6966	-3	3prime_fragment	FALSE	canonical	3	73	junction_12	18.7874833089978	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	7620	False	NA	17	True	AATAAA	-18	NA	110370071	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.36	chr9	+	6825	19	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	536	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	32.4790530786981	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110377573	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396896_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.37	chr9	+	5634	19	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-1589	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.3762601642349	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110378774	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401011_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.38	chr9	+	5630	19	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-1377	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	32.2452503919493	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTCCCTCAAAAT	NA	False	NA	18	True	AATAAA	-19	NA	110378986	110447680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402496_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.39	chr9	+	4269	19	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-229	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.5466673099189	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110380134	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401013_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.40	chr9	+	3976	19	NNC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-156	212	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.3762601642349	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTTGTTCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	110380207	110447428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401012_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.41	chr9	+	174	1	Intergenic	novelGene_29485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATACACATATCTC	3432	False	NA	NA	False	NA	NA	NA	110384377	110384551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110384400_110384600
ES.36241.44	chr9	+	3219	1	Intergenic	novelGene_29487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	110435174	110438393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110435200_110438400
ES.36241.45	chr9	+	175	1	Intergenic	novelGene_29488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTAAAAGAATATATAG	NA	False	NA	NA	False	NA	NA	NA	110437394	110437569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110437400_110437600
ES.36241.46	chr9	+	976	2	ISM	ENSMUSG00000044791.17	ENSMUST00000197399.2	767	6	15153	-436	-274	-23	3prime_fragment	FALSE	canonical	3	155	junction_1	0	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110446394	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110446604_110446885
ES.36241.5	chr9	+	8333	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3402	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.336328219644	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGCTCCCTCAAAAT	NA	False	NA	18	True	AATAAA	-19	NA	110358262	110447680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110439065_110439118_110443937_110444019_110446501_110446604_110446885
ES.36241.6	chr9	+	8233	20	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3402	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.6803013570899	213	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110358262	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358374_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401128_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.8	chr9	+	8117	19	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8438761899776	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATCAATTAAA	NA	False	NA	-10	True	NA	NA	NA	110358263	110447652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36241.9	chr9	+	8144	19	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6570561031128	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCTCCCTCAAAA	NA	False	NA	17	True	AATAAA	-18	NA	110358263	110447679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110358383_110376272_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ES.36242.1	chr9	-	175	1	Intergenic	novelGene_29484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	110368591	110368416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110368400_110368600
ES.36243.1	chr9	-	174	1	Intergenic	novelGene_29486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCCA	574	False	NA	NA	False	NA	NA	NA	110387937	110387763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110387800_110387900
ES.36244.1	chr9	-	3143	1	Antisense	novelGene_ENSMUSG00000044791.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGCAAAAAAGTAAACTGT	9411	False	NA	NA	False	ATTAAA	-34	NA	110398817	110395674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110395700_110398800
ES.36244.2	chr9	-	1283	2	Antisense	novelGene_ENSMUSG00000044791.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	9411	False	NA	NA	False	ATTAAA	-16	NA	110398817	110395692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110396903_110398744
ES.36245.1	chr9	+	203	1	Intergenic	novelGene_29489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTCTATATTAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	110448370	110448573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110448400_110448600
ES.36246.1	chr9	-	2028	4	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	1	2	intron_retention	TRUE	canonical	3	126	junction_2	1.88561808316413	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGCTCCTTGGACCTG	8946	False	NA	-3	True	ATTAAA	-27	NA	110453498	110450200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110450806_110450907_110451051_110451139_110452304_110453382
ES.36246.10	chr9	-	8855	54	FSM	ENSMUSG00000056724.16	ENSMUST00000167320.8	8803	54	-56	4	-56	-4	multi-exon	FALSE	canonical	2	5	junction_38	4.32878054960468	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	NA	False	NA	-2	True	AATAAA	-19	NA	110483285	110453860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36246.11	chr9	-	5383	30	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-198	-4	intron_retention	TRUE	canonical	2	7	junction_5	3.88876243117725	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	NA	False	NA	-2	True	AATAAA	-19	NA	110464353	110453860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113
ES.36246.12	chr9	-	7578	43	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-1234	-4	intron_retention	FALSE	canonical	2	5	junction_37	4.39445383293486	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	7723	False	NA	-2	True	AATAAA	-19	NA	110468919	110453860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847
ES.36246.13	chr9	-	9029	53	NNC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-21	-6	intron_retention	FALSE	canonical	0	0	junction_27	5.14044612757809	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCGGTTTCTTGAGT	NA	False	NA	-4	True	AATAAA	-17	NA	110483250	110453862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462257_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467083_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36246.14	chr9	-	5898	34	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-1315	-6	intron_retention	FALSE	canonical	2	7	junction_5	3.7477878384825	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCGGTTTCTTGAGT	NA	False	NA	-4	True	AATAAA	-17	NA	110465470	110453862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464785_110464928_110465089_110465362
ES.36246.15	chr9	-	2259	6	ISM	ENSMUSG00000056724.16	ENSMUST00000131017.8	3303	23	4250	-248	1083	-6	intron_retention	FALSE	canonical	2	7	junction_5	5.8309518948453	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCGGTTTCTTGAGT	5575	False	NA	-4	True	AATAAA	-17	NA	110456869	110453862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603
ES.36246.16	chr9	-	5736	32	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-56	-173	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	4.07729685401934	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTGGTGCACACCTT	NA	False	NA	NA	False	AATAAA	-18	NA	110483285	110460306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36246.17	chr9	-	5973	31	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-7	-176	intron_retention	FALSE	canonical	2	5	junction_15	4.23857942659514	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGGTGGTGCACAC	NA	False	NA	NA	False	AATAAA	-15	NA	110483236	110460309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36246.18	chr9	-	5611	33	ISM	ENSMUSG00000056724.16	ENSMUST00000167320.8	8803	54	146	6454	127	-177	5prime_fragment	FALSE	canonical	2	5	junction_17	4.1302050493892	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTGTGGTGGTGCACA	NA	False	NA	NA	False	AATAAA	-14	NA	110483083	110460310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36246.2	chr9	-	1257	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	-36	2	-36	-2	multi-exon	FALSE	canonical	3	119	junction_3	3.96074487943871	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	8888	False	NA	-7	True	ATTAAA	-23	NA	110453556	110450204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ES.36246.3	chr9	-	1152	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	-497	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	53.4058751449688	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	9557	False	NA	-7	True	ATTAAA	-23	NA	110452887	110450204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110452818
ES.36246.4	chr9	-	3830	3	ISM	ENSMUSG00000056724.16_ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	-705	2	-705	-2	intron_retention	FALSE	canonical	3	126	junction_2	2	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	8219	False	NA	-7	True	ATTAAA	-23	NA	110454225	110450204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110450806_110450907_110451051_110451139
ES.36246.5	chr9	-	1177	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	78	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.2695817194126	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTACTTGGCTCCTTGG	9076	False	NA	-8	True	ATTAAA	-22	NA	110453368	110450205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453273
ES.36246.6	chr9	-	1039	5	NIC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	51.265851207212	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTACTTGGCTCCTTGG	8958	False	NA	-8	True	ATTAAA	-22	NA	110453486	110450205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110450806_110450907_110451051_110451139_110451183_110452154_110452304_110453382
ES.36246.7	chr9	-	1054	5	NNC	ENSMUSG00000032491.15	novel	1223	5	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	54.7283062043765	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACCTACTTGGCTCCTT	8983	False	NA	-10	True	ATTAAA	-20	NA	110453461	110450207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110450806_110450907_110451051_110451139_110451225_110452154_110452304_110453382
ES.36246.8	chr9	-	6324	28	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	-921	-2	intron_retention	TRUE	canonical	2	7	junction_5	3.98281631370965	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGTTTCTTGAGTACAC	NA	False	NA	0	True	AATAAA	-21	NA	110465076	110453858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464785_110464928
ES.36246.9	chr9	-	8564	53	NIC	ENSMUSG00000056724.16	novel	8803	54	NA	NA	135	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_38	4.27299729898812	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCGGTTTCTTGAGTAC	NA	False	NA	-2	True	AATAAA	-19	NA	110483075	110453860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463539_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ES.36247.1	chr9	+	866	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	-31	-1	-31	1	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGTTGCTCTGGATT	8451	False	NA	30	True	AATAAA	-30	NA	110485539	110540675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ES.36247.2	chr9	+	1171	1	FSM	ENSMUSG00000019659.9	ENSMUST00000198077.2	1150	1	9	-30	-4	30	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGATTGGTCAGTCTCGG	8513	False	NA	NA	False	NA	NA	NA	110485601	110486772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110485600_110486800
ES.36247.3	chr9	+	876	6	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	32	14	-3	-1	intron_retention	FALSE	canonical	3	695	junction_3	21.9544984001001	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGTTGTTTCATTTCC	8514	False	NA	15	True	AATAAA	-15	NA	110485602	110540660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153
ES.36247.4	chr9	+	733	7	NNC	ENSMUSG00000019659.9	novel	834	7	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	271.305485876469	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGTTGTTTCATTTCC	8523	False	NA	15	True	AATAAA	-15	NA	110485611	110540660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540213_110540346
ES.36247.5	chr9	+	948	6	NIC	ENSMUSG00000019659.9	novel	834	7	NA	NA	6	1	intron_retention	FALSE	canonical	3	695	junction_3	23.7907545067406	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTTCATTTCCTA	8527	False	NA	17	True	AATAAA	-17	NA	110485615	110540662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539230_110540153_110540231_110540318
ES.36247.6	chr9	+	3423	1	Intergenic	novelGene_29491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	1724	False	NA	NA	False	NA	NA	NA	110530960	110534383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110531000_110534400
ES.36247.7	chr9	+	170	1	Intergenic	novelGene_29492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	1674	False	NA	NA	False	NA	NA	NA	110534384	110534554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110534400_110534600
ES.36248.1	chr9	-	225	1	Intergenic	novelGene_29490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGGCTGGAGGTGCAGT	4518	False	NA	NA	False	NA	NA	NA	110528433	110528208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110528200_110528400
ES.36249.1	chr9	-	1523	1	Antisense	novelGene_ENSMUSG00000019659.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTAGTTGTGTGCACG	1713	False	NA	NA	False	NA	NA	NA	110531238	110529715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110529700_110531200
ES.3625.1	chr10	-	7481	31	FSM	ENSMUSG00000074785.6	ENSMUST00000099337.5	7302	31	-179	0	-179	0	multi-exon	TRUE	canonical	0	0	junction_5	2.01218510303821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTGTTTGTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	94780876	94626727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
ES.3625.2	chr10	-	6025	32	NNC	ENSMUSG00000074785.6	novel	7302	31	NA	NA	652	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.00675238903171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATGTGGACTGTTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	94780045	94626733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_94628433_94629051_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
ES.3625.3	chr10	-	6111	31	FSM	ENSMUSG00000074785.6	ENSMUST00000099337.5	7302	31	-163	1354	-163	-1354	multi-exon	FALSE	canonical	0	0	junction_5	2.01218510303821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTTCACATTGGAGTA	NA	False	NA	3	True	AATAAA	-25	NA	94780860	94628081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
ES.36250.1	chr9	+	222	1	Intergenic	novelGene_29493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCACTAACTGTTCTT	NA	False	NA	NA	False	AAAAAG	-25	NA	110566984	110567206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110567000_110567200
ES.36251.1	chr9	+	2186	7	NNC	ENSMUSG00000059741.14	novel	937	7	NA	NA	14	18765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.10554159678513	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAGTTATCTTTGGCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	110592727	110617631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110592969_110595546_110595575_110595688_110595839_110596975_110597150_110598169_110598248_110598482_110598521_110616154
ES.36251.2	chr9	+	180	1	Intergenic	novelGene_29494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	110602697	110602877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110602700_110602900
ES.36252.1	chr9	-	1201	2	Intergenic	novelGene_29495	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAGAGAGAGAG	1378	False	NA	NA	False	NA	NA	NA	110623022	110621785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110622492_110622527
ES.36253.1	chr9	-	206	1	Intergenic	novelGene_29496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGGTGGTTGCACAT	NA	False	NA	NA	False	NA	NA	NA	110625782	110625576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110625600_110625800
ES.36254.1	chr9	+	3006	7	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-902	-7	intron_retention	FALSE	canonical	0	0	junction_3	5.52016505389307	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTATATGAGCAGAC	1808	False	NA	NA	False	GATAAA	-21	NA	110626331	110632815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626360_110626505_110626566_110627080_110627207_110627319_110627477_110627779_110627848_110628225_110630040_110632062
ES.36254.2	chr9	+	2240	7	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-897	-18	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAGCTAAGAAACTA	1813	False	NA	NA	False	GATAAA	-10	NA	110626336	110632804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626360_110626505_110627477_110627779_110627937_110628225_110628489_110629878_110630040_110632062_110632114_110632190
ES.36254.3	chr9	+	3206	8	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-888	-7	intron_retention	FALSE	canonical	0	0	junction_1	5.61702950038214	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACTATATGAGCAGAC	1822	False	NA	NA	False	GATAAA	-21	NA	110626345	110632815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626566_110626886_110626943_110627080_110627207_110627319_110627477_110627779_110627937_110628225_110630040_110632062_110632114_110632190
ES.36254.4	chr9	+	3176	6	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-880	3	intron_retention	FALSE	canonical	1	1	junction_3	5.16139516022558	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCAGACTTCCTTATTT	1830	False	NA	NA	False	GATAAA	-31	NA	110626353	110632825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626566_110627080_110627477_110627779_110627848_110628225_110630040_110632062_110632114_110632190
ES.36254.5	chr9	+	2538	7	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-869	-12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	4.45969605341988	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTAAGAAACTATATGAG	1841	False	NA	NA	False	GATAAA	-16	NA	110626364	110632810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626566_110627080_110627477_110627779_110627937_110628225_110629178_110629878_110630040_110632062_110632114_110632190
ES.36254.6	chr9	+	3596	4	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-860	-12	intron_retention	FALSE	canonical	3	11	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCTAAGAAACTATATGAG	1850	False	NA	NA	False	GATAAA	-16	NA	110626373	110632810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110626566_110627080_110627477_110627779_110630040_110632062
ES.36254.7	chr9	+	2626	3	NNC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	-523	1103	intron_retention	FALSE	non_canonical	0	0	junction_2	7	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGACATGCATTTGT	2187	False	NA	NA	False	ATTAAA	-14	NA	110626710	110633925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110627477_110627779_110628373_110632658
ES.36254.8	chr9	+	4198	3	NIC	ENSMUSG00000044664.8	novel	1584	5	NA	NA	166	1101	intron_retention	FALSE	canonical	3	13	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTTGACATGCATTT	2876	False	NA	NA	False	ATTAAA	-12	NA	110627399	110633923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110627477_110627779_110630040_110632062
ES.36255.1	chr9	-	192	1	Intergenic	novelGene_29497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGTAAAACTCCTTA	2431	False	NA	NA	False	NA	NA	NA	110642910	110642718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110642700_110642900
ES.36256.1	chr9	+	1708	8	Fusion	ENSMUSG00000047257.14_ENSMUSG00000049719.15	novel	1232	6	NA	NA	14	-2	multi-exon	TRUE	canonical	0	0	junction_4	0.989743318610787	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTGTGCCTTCTCTGA	1978	False	NA	NA	False	CATAAA	-14	NA	110663669	110685582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_110663808_110665133_110665161_110667488_110667637_110668089_110668365_110678694_110678873_110679063_110679327_110680382_110680547_110685067
ES.36257.1	chr9	+	1493	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	-38	1	-38	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCCTCCTTTCTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	110686996	110693696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
ES.36257.2	chr9	+	1276	6	NNC	ENSMUSG00000048752.8	novel	1456	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.31413210223457	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCCTCCTTTCTGAG	NA	False	NA	NA	False	ATTAAA	-14	NA	110687038	110693695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110687198_110687371_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
ES.36258.1	chr9	-	3058	6	NNC	ENSMUSG00000049555.11	novel	2802	6	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.95959179422654	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACGTTCTCTCCCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	110709183	110694774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110696026_110696515_110696666_110699698_110699817_110702863_110703167_110704695_110705086_110708337
ES.36258.2	chr9	-	3135	6	NNC	ENSMUSG00000049555.11	novel	2802	6	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.6	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACGTTCTCTCCCT	NA	False	NA	NA	False	AATAAA	-14	NA	110709183	110694776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110696026_110696515_110696666_110699698_110699817_110702863_110703246_110704695_110705086_110708337
ES.36258.3	chr9	-	2768	6	NNC	ENSMUSG00000049555.11	novel	2802	6	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.78885438199983	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACGTTCTCTCCCT	NA	False	NA	NA	False	AATAAA	-14	NA	110709179	110694776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110696026_110696515_110696666_110699732_110699817_110702863_110703095_110704695_110704908_110708337
ES.36258.4	chr9	-	2990	6	NNC	ENSMUSG00000049555.11	novel	2802	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.95959179422654	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCTGACGTTCTCTCC	NA	False	NA	NA	False	AATAAA	-12	NA	110709191	110694778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110696026_110696515_110696666_110699698_110699817_110702863_110703095_110704695_110705086_110708337
ES.36259.1	chr9	+	4989	26	NIC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.08801805866774	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709230	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709298_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.10	chr9	+	5162	28	NIC	ENSMUSG00000044037.16	novel	5079	27	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	7.41055488685824	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110709279	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709298_110709409_110709526_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.11	chr9	+	5243	27	FSM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	-90	-3	14	0	multi-exon	FALSE	canonical	3	12	junction_1	6.10945527743532	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709314	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.12	chr9	+	3595	27	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	27	-1626	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	6.69109184357617	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCATCTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	110709327	110727966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709526_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.13	chr9	+	5018	26	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	7.46147438513328	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709373	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.14	chr9	+	5040	26	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.08801805866774	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110709406	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709526_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.15	chr9	+	5580	26	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	30	0	intron_retention	FALSE	canonical	3	12	junction_1	6.19031501621687	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709434	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.16	chr9	+	4588	20	NIC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	-209	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	7.58734914420123	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	5141	False	NA	4	True	AATAAA	-17	NA	110715147	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.17	chr9	+	4239	20	NNC	ENSMUSG00000044037.16	novel	4122	19	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.53128286592983	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGCATGTGTGT	7108	False	NA	1	True	AATAAA	-14	NA	110717114	110729595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110717250_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.18	chr9	+	4149	20	NIC	ENSMUSG00000044037.16	novel	4122	19	NA	NA	72	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.36691713975692	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	7128	False	NA	4	True	AATAAA	-17	NA	110717134	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110717177_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.19	chr9	+	4145	20	NNC	ENSMUSG00000044037.16	novel	4122	19	NA	NA	90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.9609803579223	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	7146	False	NA	4	True	AATAAA	-17	NA	110717152	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110717177_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719354_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.2	chr9	+	4996	26	NIC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	7.67333043730035	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709236	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110709298_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.20	chr9	+	2545	20	NNC	ENSMUSG00000044037.16	novel	5079	27	NA	NA	191	-1626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.53128286592983	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCATCTCATTTATTT	7247	False	NA	NA	False	NA	NA	NA	110717253	110727966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110717324_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.21	chr9	+	3718	15	ISM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	9747	-2	2089	-1	3prime_fragment	FALSE	canonical	3	17	junction_8	5.4832769883175	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	9145	False	NA	3	True	AATAAA	-16	NA	110719151	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.22	chr9	+	3674	15	NNC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	2095	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.27585620454871	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	9151	False	NA	3	True	AATAAA	-16	NA	110719157	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723754_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.23	chr9	+	3417	12	NIC	ENSMUSG00000044037.16	novel	4122	19	NA	NA	2298	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.1622148932151	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	9354	False	NA	3	True	AATAAA	-16	NA	110719360	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110719531_110720921_110721000_110721861_110721993_110723054_110723229_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.24	chr9	+	3508	13	NIC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	2302	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.9485411598142	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGCATGTGTGT	9358	False	NA	1	True	AATAAA	-14	NA	110719364	110729595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110719531_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.25	chr9	+	3491	13	NNC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	2743	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.90809556901287	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGCATGTGTGTT	9799	False	NA	2	True	AATAAA	-15	NA	110719805	110729596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723641_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.26	chr9	+	2116	1	NIC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	10419	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110727481	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110727500_110729600
ES.36259.3	chr9	+	5084	27	FSM	ENSMUSG00000044037.16	ENSMUST00000084926.9	5079	27	1	-6	1	0	multi-exon	FALSE	canonical	3	5	junction_2	6.964087930954	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709242	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110709298_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.4	chr9	+	3446	27	FSM	ENSMUSG00000044037.16	ENSMUST00000084926.9	5079	27	5	1628	5	-1628	multi-exon	FALSE	canonical	3	5	junction_2	6.964087930954	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGTTCATCTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	110709246	110727964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110709298_110711781_110711892_110713085_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.6	chr9	+	5105	27	NNC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	7.66495135600617	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGCATGTGTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	110709266	110729597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110709298_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723504_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.8	chr9	+	5008	27	NNC	ENSMUSG00000044037.16	novel	5056	27	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	8.81298128065948	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGCATGTGTGTTCA	NA	False	NA	4	True	AATAAA	-17	NA	110709267	110729598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110709298_110709409_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719248_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.36259.9	chr9	+	3534	28	NNC	ENSMUSG00000044037.16	novel	5150	27	NA	NA	2	-1626	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	7.81542914910221	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTTCATCTCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	110709275	110727966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110709298_110709409_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719248_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ES.3626.1	chr10	+	535	2	Intergenic	novelGene_2764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGGCTATCCTTGC	NA	False	NA	NA	False	NA	NA	NA	94784986	94786234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_94785090_94785802
ES.36260.1	chr9	+	171	1	Intergenic	novelGene_29498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAATCAAACATCG	NA	False	NA	NA	False	NA	NA	NA	110753529	110753700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110753500_110753700
ES.36261.1	chr9	-	858	3	NNC	ENSMUSG00000096393.2	novel	499	3	NA	NA	-10645	337	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTCAGTCGTTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	110756574	110743469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110744095_110745519_110745666_110756487
ES.36262.1	chr9	+	204	1	Intergenic	novelGene_29499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATTTTTATCCTG	NA	False	NA	NA	False	NA	NA	NA	110762132	110762336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110762100_110762300
ES.36263.1	chr9	+	168	1	Antisense	novelGene_ENSMUSG00000032494.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAACCACATGTAGA	3694	False	NA	NA	False	NA	NA	NA	110773460	110773628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_110773500_110773600
ES.36264.1	chr9	-	1624	6	NNC	ENSMUSG00000032494.13	novel	502	4	NA	NA	-5	5527	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	1782.49874053251	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCAGTCTCTTGAATT	NA	False	NA	NA	False	AATACA	-22	NA	110775148	110763143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110764131_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.10	chr9	-	3928	4	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	2074.75797785348	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110771992_110772038_110772322_110773258_110773312_110774891
ES.36264.11	chr9	-	2102	7	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	2128.90937780096	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775196	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110772754_110772955_110773258_110773312_110774891
ES.36264.12	chr9	-	3539	4	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3873	junction_2	326.06884072062	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771713_110772219_110772322_110773258
ES.36264.13	chr9	-	6445	2	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	0	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110771992_110772038
ES.36264.14	chr9	-	4971	3	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_2	2335.5	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775197	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771992_110772038
ES.36264.15	chr9	-	3377	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3873	junction_2	400.681528773164	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.16	chr9	-	3354	4	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	2172.61506535839	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771990_110772038_110773312_110774891
ES.36264.17	chr9	-	3366	3	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_1	2254.5	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110771713_110773258_110773312_110774891
ES.36264.18	chr9	-	4012	4	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_2	2108.30300373441	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775175	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771992_110772038_110772322_110773258
ES.36264.19	chr9	-	6334	3	NNC	ENSMUSG00000032494.13	novel	502	4	NA	NA	-8	-7	intron_retention	FALSE	canonical	0	0	junction_2	2482.5	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775151	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110771507_110771597_110771990_110772038
ES.36264.2	chr9	-	2019	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	-66	-21	-66	21	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTAAGTTAAATAGTT	NA	False	NA	6	True	AGTAAA	-42	NA	110775292	110768649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.20	chr9	-	3339	4	NIC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	intron_retention	FALSE	canonical	3	35	junction_3	2257.92018361047	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110773258
ES.36264.21	chr9	-	1762	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	2037.2819361836	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775165	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110773258_110773312_110774891
ES.36264.22	chr9	-	5887	3	NIC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	intron_retention	FALSE	canonical	3	3873	junction_2	546	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110771507_110771597_110771713_110772219
ES.36264.23	chr9	-	4886	3	NNC	ENSMUSG00000032494.13	novel	786	3	NA	NA	596	-7	intron_retention	FALSE	canonical	0	0	junction_1	2121.5	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110774547	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110771992_110772038_110772322_110773258
ES.36264.24	chr9	-	1670	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769289_110769479_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.25	chr9	-	3899	5	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_3	2019.64444581218	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771990_110772038_110772322_110773258
ES.36264.26	chr9	-	4904	3	ISM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	45	7	-19	-7	intron_retention	FALSE	canonical	3	4671	junction_1	147	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775181	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110769888_110771396_110771507_110771597
ES.36264.27	chr9	-	1702	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769300_110769458_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.28	chr9	-	2365	6	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_4	1801.18012425188	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110772754_110773312_110774891
ES.36264.29	chr9	-	2462	6	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	1837.26159269713	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772923_110773258_110773312_110774891
ES.36264.3	chr9	-	3527	5	ISM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	0	-15	0	15	intron_retention	FALSE	canonical	3	3873	junction_3	415.110828574731	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAAGTGGTAAGTTAA	NA	False	NA	0	True	AGTAAA	-36	NA	110775226	110768655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258
ES.36264.30	chr9	-	2119	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	2141.33723147217	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110772696_110772955_110773258_110773312_110774891
ES.36264.31	chr9	-	1808	5	NIC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1990.37212287049	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110774891
ES.36264.32	chr9	-	1824	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769555_110769591_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.33	chr9	-	4315	4	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	502	-7	intron_retention	FALSE	canonical	0	0	junction_3	2274.39618360566	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110774641	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771990_110772038
ES.36264.34	chr9	-	1806	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769485_110769539_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.35	chr9	-	1634	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	475	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1813.61204230673	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110774668	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774624
ES.36264.36	chr9	-	1838	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775228	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769038_110769126_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.37	chr9	-	2245	6	NIC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	intron_retention	FALSE	canonical	2	10	junction_3	1852.86012424036	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110771835_110772322_110773258_110773312_110774891
ES.36264.38	chr9	-	2017	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	2128.43599987304	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATGTGAGTAGTGCC	NA	False	NA	-22	True	AGTAAA	-14	NA	110775162	110768677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110772754_110772911_110773258_110773312_110774891
ES.36264.39	chr9	-	1730	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAATGTGAGTAGTGC	NA	False	NA	-23	True	AGTAAA	-13	NA	110775161	110768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769164_110769292_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.4	chr9	-	6513	1	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-21	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1989	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775183	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110768700_110775200
ES.36264.40	chr9	-	1500	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1696.49855093759	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAATGTGAGTAGTGC	NA	False	NA	-23	True	AGTAAA	-13	NA	110775119	110768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110768720_110769036_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.41	chr9	-	3304	4	NIC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-8	intron_retention	FALSE	canonical	3	4544	junction_3	176.322305893371	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAATGTGAGTAGTGC	NA	False	NA	-23	True	AGTAAA	-13	NA	110775162	110768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110773312_110774891
ES.36264.42	chr9	-	1767	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1840.40045642246	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAAATGTGAGTAGTGC	NA	False	NA	-23	True	AGTAAA	-13	NA	110775159	110768678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772248_110773274_110773312_110774891
ES.36264.43	chr9	-	1883	6	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1753.22137792123	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAAATGTGAGTAGTG	NA	False	NA	-24	True	AGTAAA	-12	NA	110775162	110768679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771531_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.44	chr9	-	4947	4	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	1	-9	intron_retention	FALSE	canonical	3	3873	junction_2	453.461746518442	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAAATGTGAGTAGTG	NA	False	NA	-24	True	AGTAAA	-12	NA	110775161	110768679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110771507_110771597_110771713_110772219_110772322_110773258
ES.36264.45	chr9	-	2824	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-28	-9	intron_retention	FALSE	canonical	3	3873	junction_3	399.946480794618	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAAATGTGAGTAGTG	NA	False	NA	-24	True	AGTAAA	-12	NA	110775190	110768679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110773312_110774891
ES.36264.46	chr9	-	783	2	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	4336	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGAACAAAATGTGAGTA	NA	False	NA	-27	True	AGTAAA	-9	NA	110769603	110768682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769292_110769429
ES.36264.48	chr9	-	1949	6	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1813.61204230673	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGAACAAAATGTGAGTA	NA	False	NA	-27	True	AGTAAA	-9	NA	110775162	110768682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774798
ES.36264.49	chr9	-	1821	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	31	80	31	-80	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCACGTATTGTCAAG	NA	False	NA	-25	True	AGTAAA	-10	NA	110775195	110768750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.5	chr9	-	4479	4	ISM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	-30	0	-30	0	intron_retention	FALSE	canonical	3	3873	junction_3	461.363197491954	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775256	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219
ES.36264.50	chr9	-	1025	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	156	751	73	-111	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCAGGGAGGTGGTGGTG	NA	False	NA	NA	False	AGTAAA	-33	NA	110775070	110769421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.51	chr9	-	1017	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	29	886	29	-246	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGAGTTTCTTGATAGA	NA	False	NA	NA	False	NA	NA	NA	110775197	110769556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.52	chr9	-	3964	3	NNC	ENSMUSG00000032494.13	novel	786	3	NA	NA	-13	811	intron_retention	FALSE	canonical	0	0	junction_2	23.5	1899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGGCTGGCCTGGATT	NA	False	NA	NA	False	NA	NA	NA	110775175	110770613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110770848_110771396_110771990_110772038
ES.36264.6	chr9	-	3202	5	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_3	2052.39506430901	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775099	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110769888_110771396_110771507_110771597_110771992_110772038_110773312_110774891
ES.36264.7	chr9	-	2831	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1780.14781408736	1989	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775165	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110770848_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.8	chr9	-	3468	4	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3873	junction_1	274.416957687871	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110771713_110772219_110772322_110773258_110773312_110774891
ES.36264.9	chr9	-	5558	2	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4243	junction_1	0	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775165	110768670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_110772322_110773258
ES.36265.1	chr9	+	3613	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-3668	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.04922206221	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	7178	False	NA	8	True	AATAAA	-19	NA	110776944	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110777033_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.10	chr9	+	2426	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	-629	-1818	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782237	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.11	chr9	+	3285	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-628	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	123.707063258328	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782238	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.12	chr9	+	1615	8	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-628	-1818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	114.699251816858	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782238	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787025_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.13	chr9	+	1773	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-596	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	104.54903155936	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110782270	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.14	chr9	+	3694	10	NNC	ENSMUSG00000032495.9	novel	666	5	NA	NA	-298	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	114.761588618415	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782568	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.15	chr9	+	3752	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	-141	-4	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782725	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.16	chr9	+	1715	8	NIC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-65	-1818	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	98.1918156113901	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782801	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110782957_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.17	chr9	+	1557	9	NNC	ENSMUSG00000032495.9	novel	666	5	NA	NA	62	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	116.544988631	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782928	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110812689
ES.36265.18	chr9	+	1796	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	121	-1846	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	104.350895420212	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110782987	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110783105_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.19	chr9	+	3255	7	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-414	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	116.941580856996	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789487	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789522_110789869_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.2	chr9	+	1858	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-165	-1818	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	103.870035982472	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110780447	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110780599_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.20	chr9	+	1665	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-390	-1847	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	92.9191002091253	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110789511	110811287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.21	chr9	+	1664	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-377	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	115.818647823541	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789524	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795657_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.22	chr9	+	3509	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-367	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	108.274405741964	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789534	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.23	chr9	+	3722	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	8922	-9	-367	9	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGTGTTCCTGTGTGCG	NA	False	NA	17	True	AATAAA	-28	NA	110789534	110813143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.24	chr9	+	1906	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-367	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	96.8997190685069	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789534	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795657_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.25	chr9	+	1496	7	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-358	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	114.409716953296	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789543	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789637_110789869_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.26	chr9	+	1910	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-351	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	112.373879922733	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789550	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795657_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.27	chr9	+	3459	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-343	-6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	92.9191002091253	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCCTTGTTCCACGT	NA	False	NA	2	True	AATAAA	-13	NA	110789558	110813128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.28	chr9	+	3286	7	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-321	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	113.021630181523	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789580	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789646_110789869_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.29	chr9	+	1863	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-315	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	82.1734277137216	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789586	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.3	chr9	+	1765	9	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-1	-1846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.04922206221	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110780611	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110780698_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.30	chr9	+	3445	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-210	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	95.8804527757863	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789691	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110789759_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.32	chr9	+	3286	8	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-140	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	112.32714611839	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGCCTTGTTCCACGTG	NA	False	NA	3	True	AATAAA	-14	NA	110789761	110813129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.33	chr9	+	1121	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-138	-2206	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGACGAATGCACATACT	NA	False	NA	NA	False	GATAAA	-21	NA	110789763	110810928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.34	chr9	+	3324	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-124	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	118.401013509176	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789777	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110795508_110795657_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.35	chr9	+	3329	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	108.012962185101	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789781	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.36	chr9	+	1149	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9170	2316	-119	2220	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAATTGCGGCTTGTGC	NA	False	NA	NA	False	NA	NA	NA	110789782	110810818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.37	chr9	+	3272	8	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-114	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	124.675251623355	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110789787	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795657_110799081_110799248_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.38	chr9	+	1485	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-114	-1818	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	83.1033092000553	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789787	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110790078_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.39	chr9	+	1613	7	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	9176	1846	-113	-1846	3prime_fragment	FALSE	canonical	3	227	junction_2	34.6959011347962	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789788	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.4	chr9	+	1770	9	FSM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	69	1818	69	-1818	multi-exon	FALSE	canonical	1	2	junction_1	105.561593394568	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110780681	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110780745_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.40	chr9	+	3244	8	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	98.1918156113901	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789788	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.41	chr9	+	3107	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	131.88083847002	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789788	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110799081_110799228_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.42	chr9	+	3472	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-112	-6	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_4	82.1734277137216	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCCTTGTTCCACGT	NA	False	NA	2	True	AATAAA	-13	NA	110789789	110813128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.43	chr9	+	1384	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-21	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	108.012962185101	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789880	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.44	chr9	+	1364	6	NIC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-1	-1846	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	112.634985683845	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789900	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110790078_110791582_110791740_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.45	chr9	+	2993	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	135.174783973277	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789922	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110799081_110799248_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.47	chr9	+	1324	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	30	-1846	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	118.401013509176	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110789931	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110795508_110795657_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.48	chr9	+	1381	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	30	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	126.928956507174	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110789931	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791582_110791740_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.49	chr9	+	1467	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	100	-1818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.737752114475	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110790001	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790078_110791543_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.5	chr9	+	3674	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-675	-4	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110782191	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.50	chr9	+	3260	7	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	475	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	105.031344527876	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTGTTCCACGTGT	NA	False	NA	4	True	AATAAA	-15	NA	110790376	110813130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110790471_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.51	chr9	+	2275	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	4460	-1818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	130.010768784743	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110794361	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110795422_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
ES.36265.52	chr9	+	2230	6	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	4467	-1847	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	137.159760863017	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110794368	110811287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110795422_110795508_110795657_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.53	chr9	+	156	1	Intergenic	novelGene_29502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	369	False	NA	NA	False	NA	NA	NA	110797622	110797778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110797600_110797800
ES.36265.54	chr9	+	919	3	ISM	ENSMUSG00000032495.9	ENSMUST00000035076.9	3657	9	27876	1860	18587	-1860	3prime_fragment	FALSE	canonical	3	281	junction_2	26	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATCTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110808488	110811274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110808694_110809894_110810032_110810697
ES.36265.6	chr9	+	3457	10	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-669	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	111.253464365535	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110782197	110813134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697_110812423_110812637
ES.36265.7	chr9	+	1417	3	NNC	ENSMUSG00000032495.9	novel	3657	9	NA	NA	-668	-1846	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	26	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110782198	110811288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110788087_110811236
ES.36265.8	chr9	+	1434	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-662	-2231	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTGCTTATATATTA	NA	False	NA	NA	False	AAGAAA	-20	NA	110782204	110810903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36265.9	chr9	+	1847	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-662	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAGTATACTGTTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	110782204	110811316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
ES.36266.1	chr9	-	152	1	Intergenic	novelGene_29500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110777656	110777504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110777500_110777700
ES.36267.1	chr9	-	1660	9	Antisense	novelGene_ENSMUSG00000106234.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATTTTCTGCAATG	NA	False	NA	NA	False	NA	NA	NA	110810781	110782478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110782955_110786865_110787024_110789868_110790076_110791580_110791739_110795507_110795646_110799081_110799225_110808534_110808692_110809892_110810030_110810695
ES.36267.2	chr9	-	118	1	Intergenic	novelGene_29501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	110792167	110792049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110792000_110792200
ES.36267.3	chr9	-	2338	3	Antisense	novelGene_ENSMUSG00000106234.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	11.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGATTTCCCATTA	NA	False	NA	NA	False	NA	NA	NA	110808695	110796733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110797605_110797814_110799208_110808621
ES.36268.1	chr9	+	3308	7	FSM	ENSMUSG00000057802.9	ENSMUST00000197321.5	3824	7	523	-7	523	7	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCATCTGGTTTCAACA	5081	False	NA	NA	False	AATAAA	-18	NA	110819089	110837104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110821118_110821795_110822017_110833820_110833958_110834919_110835007_110835410_110835499_110835844_110836008_110836520
ES.36269.1	chr9	-	2546	4	NNC	ENSMUSG00000066319.7	novel	703	3	NA	NA	122	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.23609564462324	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCATTTTCTTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	110819529	110814005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_110815457_110815792_110816383_110818512_110818732_110819243
ES.36269.2	chr9	-	150	1	Intergenic	novelGene_29503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAGATAAAT	NA	False	NA	NA	False	NA	NA	NA	110817843	110817693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110817700_110817800
ES.3627.1	chr10	+	544	2	Intergenic	novelGene_2765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTTTATTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	94786807	94791037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_94786885_94790570
ES.36270.1	chr9	-	4659	1	Intergenic	novelGene_29504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTATGGCAACGCAC	NA	False	NA	NA	False	NA	NA	NA	110829013	110824354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_110824400_110829000
ES.36271.1	chr9	+	194	1	Intergenic	novelGene_29505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAAAAG	470	False	NA	NA	False	NA	NA	NA	110844996	110845190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_110845000_110845200
ES.36272.1	chr9	-	3017	1	Antisense	novelGene_ENSMUSG00000032497.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAGA	148	False	NA	NA	False	NA	NA	NA	110947118	110944101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_110944100_110947100
ES.36273.1	chr9	+	1802	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-59	1448	-35	-2	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTTGGATTTTGTTT	NA	False	NA	44	True	AATGAA	-16	NA	110947143	111053288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.11	chr9	+	3200	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-10	1	-10	0	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947192	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.12	chr9	+	3009	16	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	-8	-343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.8696778727375	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATAATTGTCCCTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	110947194	111054392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111025350_111025433_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.13	chr9	+	1951	17	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	96.0629472988935	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTTGGATTTTGTTT	NA	False	NA	44	True	AATGAA	-16	NA	110947204	111053288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111023497_111023543_111028732_111028904_111034822_111034916_111036864_111036958_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.14	chr9	+	3288	16	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.1629816617895	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATTGCATCCTGTGGT	NA	False	NA	13	True	GATAAA	-18	NA	110947219	111054733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111023497_111023543_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.16	chr9	+	3351	17	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.821263490334	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947232	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_110996267_110996310_110999315_110999393_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.18	chr9	+	2970	17	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	45	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.2369926568367	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAATGAAGCAGGTTTA	NA	False	NA	18	True	ATTAAA	-26	NA	110947247	111053262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110966003_110966186_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022936_111023247_111023543_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.19	chr9	+	3357	18	NIC	ENSMUSG00000032497.20	novel	2421	28	NA	NA	142	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	103.886683008817	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947344	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_110996267_110996313_110999323_110999393_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111036864_111036958_111042880_111042983_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.2	chr9	+	1845	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-8	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTTGGATTTTGTTT	NA	False	NA	44	True	AATGAA	-16	NA	110947172	111053288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.20	chr9	+	1490	13	ISM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	1502	1449	-38	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	71.2064194203491	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGATTTGGATTTTGTT	373	False	NA	43	True	AATGAA	-15	NA	110948704	111053287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.21	chr9	+	1346	12	ISM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	43188	3	-2	-3	3prime_fragment	FALSE	canonical	3	142	junction_4	26.7065473137485	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGATTTGGATTTTGTT	NA	False	NA	43	True	AATGAA	-15	NA	110990368	111053287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.22	chr9	+	2635	10	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	6433	-1445	3568	0	3prime_fragment	FALSE	canonical	3	52	junction_2	51.8416392059082	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	8702	False	NA	15	True	GATAAA	-20	NA	111017827	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.23	chr9	+	2104	9	NNC	ENSMUSG00000032497.20	novel	822	4	NA	NA	2211	-35	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.6996287118964	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTATGAGAATGAAGC	749	False	NA	11	True	ATTAAA	-19	NA	111024319	111053255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111025433_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.24	chr9	+	1754	10	NNC	ENSMUSG00000032497.20	novel	822	4	NA	NA	2656	-33	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	100.993949213692	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATGAGAATGAAGCAG	288	False	NA	13	True	ATTAAA	-21	NA	111024764	111053257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111025433_111028732_111028904_111034822_111034916_111036864_111036958_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.25	chr9	+	4099	8	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	14263	2	-2864	-2	3prime_fragment	FALSE	canonical	3	202	junction_2	10.4705612581764	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTTGGATTTTGTTT	532	False	NA	44	True	AATGAA	-16	NA	111025657	111053288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.3	chr9	+	6311	15	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	-6	-363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.9010571844413	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAACTCAAAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	110947172	111054372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111025350_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.4	chr9	+	3476	17	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.7553547126703	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947172	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111025350_111025433_111028732_111028904_111034822_111034916_111042880_111042983_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.5	chr9	+	3291	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-7	-1445	-5	0	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCATCCTGTGGTCT	NA	False	NA	15	True	GATAAA	-20	NA	110947173	111054735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.6	chr9	+	5426	14	NNC	ENSMUSG00000032497.20	novel	3191	14	NA	NA	-5	-1	intron_retention	TRUE	canonical	0	0	junction_2	84.1349999991209	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGATTTTGTTTGTAGT	NA	False	NA	49	True	AATGAA	-21	NA	110947173	111053293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045074_111045127_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.7	chr9	+	2950	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	-6	-1105	-4	-340	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATTGTCCCTTTTTTA	NA	False	NA	NA	False	AATAAA	-43	NA	110947174	111054395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.8	chr9	+	2871	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	-23	343	1	-342	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATAATTGTCCCTTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	110947179	111054393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36273.9	chr9	+	2996	16	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	0	-342	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	84.116955616702	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATAATTGTCCCTTTTT	NA	False	NA	NA	False	AATAAA	-41	NA	110947180	111054393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111045127_111045182_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ES.36274.1	chr9	-	2465	1	Intergenic	novelGene_29506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111031697	111029232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111029200_111031700
ES.36275.1	chr9	-	2315	19	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	5	8578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	135.667030666542	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTCTGTTTCTTTA	NA	False	NA	NA	False	AGTAAA	-17	NA	111100597	111048717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111048918_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.10	chr9	-	6856	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	0	2267	intron_retention	FALSE	canonical	2	6	junction_12	95.396622348779	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTTTGGATTTCTG	NA	False	NA	-7	True	ATTAAA	-7	NA	111100602	111055028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087628_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.11	chr9	-	6291	17	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	2267	intron_retention	FALSE	canonical	0	0	junction_1	95.3878390768446	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTTTGGATTTCTG	NA	False	NA	-7	True	ATTAAA	-7	NA	111100600	111055028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.12	chr9	-	4669	18	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	0	2267	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	167.494605604403	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTTTGGATTTCTG	NA	False	NA	-7	True	ATTAAA	-7	NA	111100602	111055028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.13	chr9	-	4675	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	2267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.20893647263	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTTTGGATTTCTG	NA	False	NA	-7	True	ATTAAA	-7	NA	111100600	111055028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057693_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087628_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.14	chr9	-	4976	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-5	2267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	145.621525911742	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTTTGGATTTCTG	NA	False	NA	-7	True	ATTAAA	-7	NA	111100607	111055028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086136_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.15	chr9	-	2673	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	138.614973229172	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGGAAAACTTTCTAAA	NA	False	NA	0	True	AATAAA	-42	NA	111100647	111057295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111063127_111063232_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.16	chr9	-	4801	19	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_5	151.581752786336	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGGAAAACTTTCTAAA	NA	False	NA	0	True	AATAAA	-42	NA	111100657	111057295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070402_111070516_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.17	chr9	-	2603	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	178	-27	-13	0	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGGAAAACTTTCTAAA	NA	False	NA	0	True	AATAAA	-42	NA	111100681	111057295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.18	chr9	-	3788	18	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_2	93.8071348390558	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTGGAAAACTTTCTAA	NA	False	NA	-1	True	AATAAA	-41	NA	111100654	111057296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.19	chr9	-	4095	10	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_7	139.328637170549	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCGCACATTGGAAAACTT	NA	False	NA	-6	True	AATAAA	-36	NA	111100601	111057301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111093934_111094034_111097285_111097372_111100476
ES.36275.2	chr9	-	3416	20	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	1	5275	intron_retention	FALSE	canonical	0	0	junction_1	163.004104089862	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTCTATGCTTGTTTT	NA	False	NA	NA	False	AATACA	-21	NA	111100601	111052020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111052377_111053908_111054145_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.20	chr9	-	4517	15	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	15	-7	intron_retention	FALSE	canonical	3	11	junction_7	120.273943265245	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCGCACATTGGAAAACT	NA	False	NA	-7	True	AATAAA	-35	NA	111100653	111057302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.21	chr9	-	3349	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	-8	intron_retention	FALSE	canonical	3	11	junction_13	155.713655092517	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCGCACATTGGAAAAC	NA	False	NA	-8	True	AATAAA	-34	NA	111100601	111057303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.22	chr9	-	2483	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-5	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	91.190277259512	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCGCACATTGGAAAAC	NA	False	NA	-8	True	AATAAA	-34	NA	111100607	111057303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111059366_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.23	chr9	-	3595	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	5	-10	intron_retention	FALSE	canonical	3	23	junction_5	114.876163201825	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAACCGCACATTGGAAA	NA	False	NA	-10	True	AATAAA	-32	NA	111100597	111057305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.24	chr9	-	3355	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	-11	intron_retention	FALSE	canonical	1	3	junction_13	133.279245723857	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAACCGCACATTGGAA	NA	False	NA	-11	True	AATAAA	-31	NA	111100600	111057306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086188_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.25	chr9	-	2777	21	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	154.728762678437	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAACCGCACATTGGAA	NA	False	NA	-11	True	AATAAA	-31	NA	111100601	111057306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.26	chr9	-	2384	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	10	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.724137244087	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100592	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084703_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.27	chr9	-	3986	17	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	15	-12	intron_retention	FALSE	canonical	0	0	junction_1	139.132524504517	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100587	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084703_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.28	chr9	-	2406	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.441565403247	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100601	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.29	chr9	-	4922	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-5	-12	intron_retention	FALSE	canonical	0	0	junction_15	98.313421712851	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100607	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100138
ES.36275.3	chr9	-	2270	17	NNC	ENSMUSG00000032498.10	novel	697	8	NA	NA	2	5273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.3878390768446	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGTCTATGCTTGTT	NA	False	NA	NA	False	AATACA	-19	NA	111100600	111052022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111052377_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.30	chr9	-	4878	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-23	-12	intron_retention	FALSE	canonical	0	0	junction_2	155.668866019352	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100637	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111063127_111063261_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.31	chr9	-	6645	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	2	-12	intron_retention	TRUE	canonical	0	0	junction_8	96.9643691718194	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAACCGCACATTGGA	NA	False	NA	-12	True	AATAAA	-30	NA	111100600	111057307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082809_111083391_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.33	chr9	-	4660	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-12	-13	intron_retention	FALSE	canonical	3	23	junction_3	93.0545837428525	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100680	111057308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.34	chr9	-	3206	19	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	-13	intron_retention	FALSE	canonical	1	3	junction_13	114.97596367164	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100601	111057308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.36	chr9	-	2682	20	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	21	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	145.402983809931	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100647	111057308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.37	chr9	-	4666	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	1	-13	intron_retention	FALSE	canonical	1	2	junction_1	146.966511680571	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAACCGCACATTGG	NA	False	NA	-13	True	AATAAA	-29	NA	111100601	111057308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062206_111062356_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.38	chr9	-	2964	17	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	13	intron_retention	FALSE	canonical	1	1	junction_4	95.5776639375016	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATAACCGCACATTG	NA	False	NA	-14	True	AATAAA	-28	NA	111100600	111057309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.39	chr9	-	4778	17	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-12	5	intron_retention	FALSE	canonical	1	1	junction_11	120.549717440565	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTATATAACC	NA	False	NA	-22	True	AATAAA	-20	NA	111100626	111057317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086136_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.4	chr9	-	2232	17	NNC	ENSMUSG00000032498.10	novel	697	8	NA	NA	2	5189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.752526070103	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAATGACAGCTGCA	NA	False	NA	NA	False	TTTAAA	-21	NA	111100600	111052106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111052377_111059917_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.40	chr9	-	4443	14	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-23	5	intron_retention	FALSE	canonical	2	4	junction_8	150.618488221343	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTATATAACC	NA	False	NA	-22	True	AATAAA	-20	NA	111100637	111057317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111084695_111084785_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.41	chr9	-	3898	16	NNC	ENSMUSG00000032498.10	novel	3762	18	NA	NA	-5	4	intron_retention	FALSE	canonical	0	0	junction_1	170.610537645116	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTTTTTATATAAC	NA	False	NA	-23	True	AATAAA	-19	NA	111100607	111057318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111084695_111084785_111085156_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.44	chr9	-	4350	14	NIC	ENSMUSG00000032498.10	novel	3762	18	NA	NA	-7	2	intron_retention	FALSE	canonical	0	0	junction_5	166.421436944152	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTTTTTTTTATATA	NA	False	NA	-25	True	AATAAA	-17	NA	111100621	111057320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.45	chr9	-	2595	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	149.225034103947	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTTTTTTTTATATA	NA	False	NA	-25	True	AATAAA	-17	NA	111100601	111057320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059366_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.46	chr9	-	2795	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_2	119.931381765491	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTTTTTTTTATATA	NA	False	NA	-25	True	AATAAA	-17	NA	111100605	111057320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.47	chr9	-	4687	17	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	3	2	intron_retention	FALSE	canonical	1	3	junction_11	151.59494498086	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTTTTTTTTATATA	NA	False	NA	-25	True	AATAAA	-17	NA	111100599	111057320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086467_111086560_111087556_111087628_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.5	chr9	-	4865	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	189	-2300	-2	2273	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGATTTCTGGGACCT	NA	False	NA	-1	True	ATTAAA	-13	NA	111100670	111055022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.51	chr9	-	3086	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-7	1	intron_retention	FALSE	canonical	3	23	junction_5	88.7524842480908	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100621	111057321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.52	chr9	-	4874	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	22	1	intron_retention	FALSE	canonical	3	11	junction_11	148.682495368708	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100646	111057321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.54	chr9	-	6337	14	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	1	1	intron_retention	FALSE	canonical	2	4	junction_8	104.761605957718	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100601	111057321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111078382_111081931_111082045_111084695_111084785_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.55	chr9	-	4461	15	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-5	1	intron_retention	FALSE	canonical	1	1	junction_2	100.554889062073	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTTTTTTTTTATAT	NA	False	NA	-26	True	AATAAA	-16	NA	111100607	111057321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.57	chr9	-	3074	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	3273	0	intron_retention	FALSE	canonical	1	1	junction_13	118.613530215456	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111097329	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086136_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285
ES.36275.58	chr9	-	6087	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	166.575232127941	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100600	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.59	chr9	-	2680	21	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.179647533231	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100571	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078113_111078190_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086197_111086337_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.6	chr9	-	5746	7	NIC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	2	2272	intron_retention	FALSE	canonical	0	0	junction_4	140.149226025532	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGATTTCTGGGACC	NA	False	NA	-2	True	ATTAAA	-12	NA	111100600	111055023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111093934_111094034_111097285_111097377_111100476
ES.36275.60	chr9	-	751	6	NNC	ENSMUSG00000032498.10	novel	3762	18	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	163.531770613542	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100572	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111058981_111060029_111060094_111093973_111094034_111097285_111097372_111100476
ES.36275.62	chr9	-	4549	16	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	6	0	intron_retention	FALSE	canonical	2	3	junction_8	139.773149543585	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100596	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084703_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.64	chr9	-	3601	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_3	166.803781087365	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100634	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111060134_111062202_111062310_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086082_111086197_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.67	chr9	-	2522	19	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	280	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	143.494483053066	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100322	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084781_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100167
ES.36275.68	chr9	-	3707	18	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_2	93.8071348390558	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100637	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111059022_111059310_111059366_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.69	chr9	-	2541	19	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	162.862245812561	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100632	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111057695_111059310_111059404_111059968_111060134_111062390_111062455_111063127_111063261_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.70	chr9	-	4543	19	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_7	153.861770574904	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100607	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111059022_111059310_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111076943_111077136_111078113_111078190_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.71	chr9	-	5260	16	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_6	124.47246906668	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100607	111057322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078113_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111085950_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.75	chr9	-	5985	20	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	-2	intron_retention	TRUE	non_canonical	0	0	junction_2	154.364302706741	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGATTTTTTTTTTTTA	NA	False	NA	-29	True	AATAAA	-13	NA	111100600	111057324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111059022_111059310_111059366_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082686_111082768_111082893_111082934_111083330_111083538_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.76	chr9	-	2239	17	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	143.158511360659	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGATTTTTTTTTTTT	NA	False	NA	-30	True	AATAAA	-12	NA	111100600	111057325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
ES.36275.77	chr9	-	3994	17	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_1	95.3878390768446	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGATTTTTTTTTTTT	NA	False	NA	-30	True	AATAAA	-12	NA	111100600	111057325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.79	chr9	-	2190	16	ISM	ENSMUSG00000032498.10	ENSMUST00000123869.8	2394	17	-138	945	53	-945	5prime_fragment	FALSE	canonical	3	322	junction_5	32.5504053567523	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTGAGTTATCTTT	NA	False	NA	NA	False	TTTAAA	-26	NA	111100806	111059900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.8	chr9	-	7092	16	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	14	2271	intron_retention	FALSE	canonical	1	1	junction_6	127.403540854335	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGGATTTCTGGGAC	NA	False	NA	-3	True	ATTAAA	-11	NA	111100654	111055024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078113_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36275.81	chr9	-	2069	17	NNC	ENSMUSG00000032498.10	novel	2394	17	NA	NA	-5	-947	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	146.40392540844	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTCTTTGAGTTATCT	NA	False	NA	NA	False	TTTAAA	-24	NA	111100607	111059902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078113_111078190_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ES.36276.1	chr9	+	4420	2	FSM	ENSMUSG00000046785.9	ENSMUST00000200053.2	578	2	-2287	-1555	-114	3	multi-exon	FALSE	canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTGTCTTTCAGTGA	NA	False	NA	16	True	NA	NA	NA	111100882	111108164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111103596_111106457
ES.36276.2	chr9	+	5315	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-125	1959	-109	-407	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGTAATTTACCCTAG	NA	False	NA	NA	False	AAGAAA	-2	NA	111100887	111106202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111100900_111106200
ES.36276.3	chr9	+	7274	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-119	-6	-103	6	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCTTTCAGTGACCA	NA	False	NA	19	True	NA	NA	NA	111100893	111108167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111100900_111108200
ES.36276.4	chr9	+	3756	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-114	3507	-98	-1955	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGGAAGTCCTGAAA	NA	False	NA	NA	False	AATAAA	-29	NA	111100898	111104654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111100900_111104700
ES.36276.5	chr9	+	3851	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-81	3379	-65	-1827	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGTGAATATGGGGG	NA	False	NA	NA	False	NA	NA	NA	111100931	111104782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111100900_111104800
ES.36276.6	chr9	+	4312	2	FSM	ENSMUSG00000046785.9	ENSMUST00000135807.2	4245	2	-59	-8	-59	4	multi-exon	FALSE	canonical	1	2	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTCTTTCAGTGAC	NA	False	NA	17	True	NA	NA	NA	111100937	111108165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111103596_111106511
ES.36276.7	chr9	+	3785	2	NNC	ENSMUSG00000046785.9	novel	4245	2	NA	NA	-59	-1827	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGTGAATATGGGGG	NA	False	NA	NA	False	NA	NA	NA	111100937	111104782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111103379_111103438
ES.36276.8	chr9	+	4342	2	NNC	ENSMUSG00000046785.9	novel	4245	2	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTTGTGTTTGTCTT	NA	False	NA	9	True	NA	NA	NA	111100978	111108157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111103596_111106432
ES.36277.1	chr9	+	10710	22	FSM	ENSMUSG00000062296.9	ENSMUST00000078626.8	10520	22	-191	1	-191	-1	multi-exon	FALSE	canonical	0	0	junction_4	1.67142178807469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTGTCTTTTTGTTTA	NA	False	NA	NA	False	TATAAA	-18	NA	111140615	111224842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111141320_111162765_111162893_111172162_111172314_111174462_111174582_111176536_111176621_111176855_111176995_111178343_111178476_111181141_111181313_111191325_111191581_111193012_111193190_111193742_111196617_111202013_111202214_111202475_111202614_111206845_111206990_111207877_111208035_111212141_111212231_111215438_111215543_111215639_111215773_111218225_111218372_111219014_111222065_111222825_111222925_111223325
ES.36277.2	chr9	+	5594	15	NIC	ENSMUSG00000062296.9	novel	10520	22	NA	NA	80	-6998	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.28769688409428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATGTGTGTGTGGGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	111140886	111207412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_111141320_111162765_111162893_111172162_111172314_111173897_111173925_111174462_111174582_111176536_111176621_111176855_111176995_111178343_111178476_111181141_111181313_111191325_111191581_111193012_111193190_111193742_111196617_111202013_111202214_111202475_111202614_111206845
ES.36277.3	chr9	+	5566	14	ISM	ENSMUSG00000062296.9	ENSMUST00000078626.8	10520	22	80	17432	80	-6999	5prime_fragment	FALSE	canonical	0	0	junction_4	1.27330348901899	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATGTGTGTGTGGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	111140886	111207411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_111141320_111162765_111162893_111172162_111172314_111174462_111174582_111176536_111176621_111176855_111176995_111178343_111178476_111181141_111181313_111191325_111191581_111193012_111193190_111193742_111196617_111202013_111202214_111202475_111202614_111206845
ES.36277.4	chr9	+	5235	6	NIC	ENSMUSG00000062296.9	novel	5546	10	NA	NA	-3272	-3	intron_retention	FALSE	canonical	0	0	junction_2	2.19089023002066	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTTGTCTTTTTGTT	725	False	NA	NA	False	TATAAA	-16	NA	111212139	111224840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_111212231_111215438_111215773_111218225_111218372_111219014_111222065_111222825_111222925_111223325
ES.36277.5	chr9	+	2545	3	NNC	ENSMUSG00000062296.9	novel	5546	10	NA	NA	5711	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTTGTCTTTTTGTT	4402	False	NA	NA	False	TATAAA	-16	NA	111221122	111224840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111222065_111222825_111222925_111223336
ES.36278.1	chr9	-	3459	1	Antisense	novelGene_ENSMUSG00000062296.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTTTAAGGACTTTGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	111221079	111217620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_111217600_111221100
ES.36279.1	chr9	+	3028	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	-23	0	-23	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	111268125	111318186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
ES.36279.2	chr9	+	2847	4	NIC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.28559218478941	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTGCCTTGTTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	111268135	111318183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_111268421_111296545_111298384_111311685_111311819_111317592
ES.36279.3	chr9	+	3464	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	34	-493	34	493	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGGGTGTGTCATTTA	NA	False	NA	NA	False	NA	NA	NA	111268182	111318679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
ES.36279.4	chr9	+	840	3	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	44660	-7	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	15	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAAGATCTGCCTTGTT	694	False	NA	NA	False	AATAAA	-13	NA	111312808	111318179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111312894_111313984_111314153_111317592
ES.36279.5	chr9	+	800	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	47911	-3	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTGCCTTGTTCAAT	3945	False	NA	NA	False	AATAAA	-17	NA	111316059	111318183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111316269_111317592
ES.36279.6	chr9	+	671	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	48646	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATCTGCCTTGTTCA	4680	False	NA	NA	False	AATAAA	-15	NA	111316794	111318181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_111316877_111317592
ES.3628.1	chr10	-	178	1	Intergenic	novelGene_2766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATAGTAAAAACT	NA	False	NA	NA	False	NA	NA	NA	94813031	94812853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94812900_94813000
ES.36280.1	chr9	-	2049	1	Intergenic	novelGene_29507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCCCAATCCCAAGTC	NA	False	NA	NA	False	NA	NA	NA	111282672	111280623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111280600_111282700
ES.36281.1	chr9	-	2488	1	Intergenic	novelGene_29508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111290934	111288446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111288400_111290900
ES.36281.2	chr9	-	6995	1	Antisense	novelGene_ENSMUSG00000032500.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACGAATGAACGAA	NA	False	NA	NA	False	NA	NA	NA	111297073	111290078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_111290100_111297100
ES.36281.3	chr9	-	5415	1	Antisense	novelGene_ENSMUSG00000032500.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGAAGTGCCTCTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	111296988	111291573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_111291600_111297000
ES.36282.1	chr9	-	3391	2	Intergenic	novelGene_29509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGATTCGCTAACAATT	NA	False	NA	NA	False	AATAAA	-17	NA	111352325	111327644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111330971_111352260
ES.36282.2	chr9	-	4142	2	Intergenic	novelGene_29510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAATGATTCGCTAACAA	NA	False	NA	NA	False	AATAAA	-15	NA	111335072	111327646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111330989_111334272
ES.36282.3	chr9	-	6820	1	Intergenic	novelGene_29511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAAAACCCTCA	NA	False	NA	NA	False	AATAGA	-24	NA	111352294	111345474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111345500_111352300
ES.36282.4	chr9	-	2434	2	Intergenic	novelGene_29512	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATATGGATAACTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	111352320	111346318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111348693_111352260
ES.36282.5	chr9	-	1678	1	Intergenic	novelGene_29513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111352331	111350653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_111350700_111352300
ES.36283.1	chr9	+	209	1	Intergenic	novelGene_29514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGGCATATGTGGAT	NA	False	NA	NA	False	NA	NA	NA	111705165	111705374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_111705200_111705400
ES.36284.1	chr9	+	698	1	Intergenic	novelGene_29515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113213135	113213833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113213100_113213800
ES.36285.1	chr9	+	3720	1	Intergenic	novelGene_29516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCACATCTGCTAAAGGA	4544	False	NA	NA	False	NA	NA	NA	113283841	113287561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113283800_113287600
ES.36286.1	chr9	-	518	4	Intergenic	novelGene_29517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTATTTAGCCTTTG	NA	False	NA	NA	False	AAAAAG	-13	NA	113290043	113287722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113287954_113288151_113288279_113289505_113289596_113289973
ES.36287.1	chr9	+	1144	1	Intergenic	novelGene_29518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113491726	113492870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113491700_113492900
ES.36288.1	chr9	+	135	1	Intergenic	novelGene_29519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113502613	113502748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113502600_113502700
ES.36289.1	chr9	+	233	1	Intergenic	novelGene_29520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATTTATTTATTATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	113523845	113524078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113523800_113524100
ES.3629.1	chr10	-	243	1	Intergenic	novelGene_2767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	94904865	94904622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_94904600_94904900
ES.36290.1	chr9	+	2630	1	Antisense	novelGene_ENSMUSG00000032504.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTATTTATTCATTC	NA	False	NA	NA	False	AATAAA	-13	NA	113536866	113539496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_113536900_113539500
ES.36291.1	chr9	-	5980	19	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-11	23013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.9003660235198	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATGAATTTCAGCCTA	NA	False	NA	NA	False	AAAACA	-14	NA	113537338	113457798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113457817_113480811_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.10	chr9	-	8108	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	27	-2	intron_retention	FALSE	canonical	3	268	junction_2	36.4638091125982	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGGAGTATGAAT	NA	False	NA	-11	True	AATAAA	-15	NA	113537285	113480813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.11	chr9	-	5808	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	2	14	junction_14	92.0324119196601	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCTGTGGAGTATGAA	NA	False	NA	-12	True	AATAAA	-14	NA	113537315	113480814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113526573_113526644_113529036_113529092_113536966
ES.36291.13	chr9	-	6630	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	13	1234	intron_retention	FALSE	canonical	3	268	junction_2	36.4638091125982	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGAATATTCTCTTGG	NA	False	NA	NA	False	AATAGA	-20	NA	113537299	113482305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.14	chr9	-	4102	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	17	1832	2	896	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAAGCACCTTACTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	113537310	113482643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.15	chr9	-	3514	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	-10	2447	-10	281	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTAATGTTTTATTGT	NA	False	NA	-1	True	AATAAA	-18	NA	113537337	113483258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.16	chr9	-	3430	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	61	274	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTATGTATTAATGTT	NA	False	NA	-8	True	AATAAA	-11	NA	113537251	113483265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.19	chr9	-	3234	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	-7	2724	-7	4	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTATGTTTTGTCATTGA	NA	False	NA	-4	True	AATAAA	-21	NA	113537334	113483535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.2	chr9	-	5966	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	-11	-4	-11	4	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGTATGAATTCTTAT	NA	False	NA	-5	True	AATAAA	-21	NA	113537338	113480807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.22	chr9	-	3218	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537313	113483539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.23	chr9	-	5820	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	9	0	intron_retention	FALSE	canonical	3	268	junction_2	36.25	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537303	113483539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.24	chr9	-	5431	17	NIC	ENSMUSG00000032504.16	novel	3223	18	NA	NA	-7	0	intron_retention	FALSE	canonical	3	268	junction_2	36.4638091125982	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537334	113483539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.25	chr9	-	5837	6	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	41320	0	-4510	0	3prime_fragment	FALSE	canonical	3	268	junction_2	46.6793316147522	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113495992	113483539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336
ES.36291.27	chr9	-	5257	16	NIC	ENSMUSG00000032504.16	novel	3223	18	NA	NA	28	0	intron_retention	FALSE	canonical	2	10	junction_9	96.6536542966115	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537284	113483539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.29	chr9	-	3645	18	NNC	ENSMUSG00000032504.16	novel	3223	18	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	93.2906682842788	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTTATGTTTTGTC	NA	False	NA	-9	True	AATAAA	-16	NA	113537299	113483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514943_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.3	chr9	-	5965	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537332	113480811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.30	chr9	-	3238	18	FSM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	-16	1	-1	-1	multi-exon	FALSE	canonical	2	4	junction_12	92.4204698786755	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTTATGTTTTGTC	NA	False	NA	-9	True	AATAAA	-16	NA	113537328	113483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.31	chr9	-	3197	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	93.2906682842788	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTTATGTTTTGTC	NA	False	NA	-9	True	AATAAA	-16	NA	113537332	113483540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514462_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.32	chr9	-	4657	12	NNC	ENSMUSG00000032504.16	novel	3223	18	NA	NA	-2262	-2	intron_retention	FALSE	canonical	0	0	junction_3	109.635308301871	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATTGTTATGTTTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	113516745	113483541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488847_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374
ES.36291.34	chr9	-	3072	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	2	14	junction_14	92.0324119196601	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTCATTGTTATGTT	NA	False	NA	-14	True	AATAAA	-11	NA	113537310	113483545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113526573_113526644_113529036_113529092_113536966
ES.36291.35	chr9	-	5402	17	NNC	ENSMUSG00000032504.16	novel	3223	18	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_10	116.702864548176	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTCATTGTTATGTT	NA	False	NA	-14	True	AATAAA	-11	NA	113537310	113483545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509028_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.36	chr9	-	4391	1	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-1574	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTCATTGTTATGTT	NA	False	NA	-14	True	AATAAA	-11	NA	113487936	113483545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113483500_113487900
ES.36291.39	chr9	-	3307	15	ISM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	36	7016	21	875	5prime_fragment	FALSE	canonical	3	312	junction_5	27.6682238722492	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTGAATGTTTTTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	113537291	113487827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.4	chr9	-	5867	19	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.9003660235198	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537308	113480811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113482615_113482679_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.5	chr9	-	5963	18	FSM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	-13	-2727	2	-1	multi-exon	FALSE	canonical	2	4	junction_12	92.4204698786755	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTGGAGTATGAATT	NA	False	NA	-10	True	AATAAA	-16	NA	113537325	113480812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ES.36291.6	chr9	-	5551	11	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-602	-1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_9	112.138485811072	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTGGAGTATGAATT	NA	False	NA	-10	True	AATAAA	-16	NA	113515085	113480812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113509020_113509244_113514374
ES.36291.7	chr9	-	5809	16	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	129.123816548304	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTGGAGTATGAATT	NA	False	NA	-10	True	AATAAA	-16	NA	113537313	113480812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500993_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113536966
ES.36292.1	chr9	+	844	4	Intergenic	novelGene_29521	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTACAGCGTGAAGGATG	NA	False	NA	NA	False	NA	NA	NA	113540102	113543274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113540224_113542140_113542269_113542443_113542551_113542786
ES.36293.1	chr9	-	177	1	Intergenic	novelGene_29522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCAGATCT	NA	False	NA	NA	False	NA	NA	NA	113564442	113564265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113564300_113564400
ES.36294.1	chr9	+	6334	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-34	15	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570506	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.10	chr9	+	6172	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-16	15	combination_of_known_splicesites	FALSE	canonical	2	10	junction_27	41.1974736350427	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570524	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.11	chr9	+	6308	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-15	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	49.8241315191008	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113570525	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602754_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719023_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.15	chr9	+	1980	11	FSM	ENSMUSG00000033392.17	ENSMUST00000216817.2	2234	11	-52	306	-13	-306	multi-exon	FALSE	canonical	3	4	junction_10	60.2408499276031	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAAGGTTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	113570527	113671659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113670935
ES.36294.16	chr9	+	5110	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-12	-2381	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.1798628683725	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCACATTTCTCATGT	NA	False	NA	NA	False	NA	NA	NA	113570528	113744823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205
ES.36294.18	chr9	+	6355	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-10	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	42.1760160106501	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570530	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730509_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.19	chr9	+	4943	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-10	-2546	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.1798628683725	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTGGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	113570530	113744658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205
ES.36294.20	chr9	+	5622	31	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-9	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.7425847363436	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATGTAGCTCAGCTCT	NA	False	NA	27	True	AATAAA	-28	NA	113570531	113748762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570709_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.21	chr9	+	6311	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	42.2187307304447	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACCTTAACTATGTAG	NA	False	NA	18	True	AATAAA	-19	NA	113570531	113748753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699813_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.22	chr9	+	8543	35	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	52.2707219550526	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTTAACTATGTAGCT	NA	False	NA	20	True	AATAAA	-21	NA	113570537	113748755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113613325_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.24	chr9	+	6330	37	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	51.2604701740936	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570537	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113691503_113691531_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.25	chr9	+	6545	38	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.4207110455443	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570537	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595215_113595337_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.26	chr9	+	6195	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	42.7745356451006	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570537	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.27	chr9	+	5864	34	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-3	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	43.3783618560987	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570537	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697783_113709225_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.29	chr9	+	6344	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	1	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	57.6457867904835	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570541	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.3	chr9	+	5951	37	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-24	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	41.628501039137	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113570516	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062_113748253_113748623
ES.36294.30	chr9	+	6219	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	1	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	42.5529184081645	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570541	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.31	chr9	+	6323	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	1	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.672489819327	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113570541	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113595011_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.32	chr9	+	6148	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.6552811655328	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570541	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642236_113664272_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.33	chr9	+	6290	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	1	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.9624127241589	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570541	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599348_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.34	chr9	+	6293	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.0231902970261	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAGACCTTAACTATG	NA	False	NA	15	True	AATAAA	-16	NA	113570544	113748750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615627_113615709_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719023_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.37	chr9	+	6112	34	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	5	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	53.166940852683	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATGTAGCTCAGCTCT	NA	False	NA	27	True	AATAAA	-28	NA	113570545	113748762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113599264_113599357_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.39	chr9	+	6298	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-14	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	42.1417820686118	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570565	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699667_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.4	chr9	+	6449	37	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-24	15	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	49.1547929793169	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113570516	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.40	chr9	+	6165	35	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	0	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	42.5064212531573	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113570579	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.41	chr9	+	2844	22	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	12	19917	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	42.5480920377685	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTTTAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	113570591	113704714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113704332
ES.36294.42	chr9	+	6019	36	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	16936	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.8751886989352	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATGTAGCTCAGCTCT	NA	False	NA	27	True	AATAAA	-28	NA	113587735	113748762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113587861_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.43	chr9	+	6162	38	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	16970	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.408244592235	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAGACCTTAACTATGT	NA	False	NA	16	True	AATAAA	-17	NA	113587769	113748751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113587861_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113704332_113704396_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.44	chr9	+	5700	33	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-23131	-1	combination_of_known_splicesites	FALSE	canonical	3	90	junction_21	29.3001039887233	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGAAGACCTTAACTAT	NA	False	NA	14	True	AATAAA	-15	NA	113599262	113748749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.45	chr9	+	5518	30	NIC	ENSMUSG00000033392.17	novel	1487	5	NA	NA	-4	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.2341773073263	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113622389	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113622535_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.46	chr9	+	5374	29	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	540	10	combination_of_known_splicesites	FALSE	canonical	3	90	junction_17	29.8368864983994	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTATGTAGCTCAGCT	NA	False	NA	25	True	AATAAA	-26	NA	113642207	113748760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.47	chr9	+	2794	1	Intergenic	novelGene_29526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTACTGTTGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	113659490	113662284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113659500_113662300
ES.36294.48	chr9	+	4156	26	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	31601	126	combination_of_known_splicesites	FALSE	canonical	3	90	junction_14	30.216392901867	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCATGTGTGTCTTTGA	NA	False	NA	NA	False	AATAGA	-30	NA	113673268	113747991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.50	chr9	+	7531	15	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	59900	15	intron_retention	FALSE	canonical	3	90	junction_3	36.1276789134518	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTAGCTCAGCTCTTTC	NA	False	NA	30	True	AATAAA	-31	NA	113701567	113748765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.51	chr9	+	6137	14	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	64883	13	intron_retention	FALSE	canonical	3	90	junction_2	37.463038984322	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113706550	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.52	chr9	+	5986	11	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	77409	11	intron_retention	FALSE	canonical	3	173	junction_1	22.0417785126337	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTATGTAGCTCAGCTC	NA	False	NA	26	True	AATAAA	-27	NA	113719076	113748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113719190_113721464_113721544_113725709_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.53	chr9	+	6564	8	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	85165	13	intron_retention	FALSE	canonical	3	187	junction_4	17.3781471969828	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	415	False	NA	28	True	AATAAA	-29	NA	113726832	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.54	chr9	+	6936	7	NIC	ENSMUSG00000033392.17	novel	5609	33	NA	NA	88297	-4	intron_retention	FALSE	canonical	3	187	junction_4	11.8567842745549	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACTTGAAGACCTTAAC	3547	False	NA	11	True	AATAAA	-12	NA	113729964	113748746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113744323_113747062
ES.36294.55	chr9	+	6758	3	Intergenic	novelGene_29527	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTCTGCCACTTGTT	688	False	NA	NA	False	NA	NA	NA	113742209	113755124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113743285_113749303_113752335_113752472
ES.36294.7	chr9	+	5941	32	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-24	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	44.2658462076426	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGACCTTAACTATGTA	NA	False	NA	17	True	AATAAA	-18	NA	113570516	113748752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36294.8	chr9	+	6382	37	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	-21	13	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	50.0078388916906	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATGTAGCTCAGCTCTT	NA	False	NA	28	True	AATAAA	-29	NA	113570519	113748763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113704332_113704396_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ES.36295.1	chr9	-	2971	3	Antisense	novelGene_ENSMUSG00000033392.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAATTTTTAAAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	113587601	113569074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_113571858_113587214_113587365_113587563
ES.36295.2	chr9	-	3868	31	Intergenic	novelGene_29523	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTCAGAGCGACGCGCCC	NA	False	NA	NA	False	NA	NA	NA	113735186	113570516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113570943_113590656_113590737_113595636_113595739_113599263_113599357_113600850_113600925_113602745_113602842_113615627_113615701_113642207_113642355_113664240_113664321_113670624_113670719_113673140_113673281_113676762_113676906_113677547_113677618_113679188_113679249_113680888_113680967_113681688_113681854_113682409_113682471_113683238_113683417_113691256_113691356_113697615_113697786_113699689_113699798_113705310_113705419_113709010_113709253_113710753_113710818_113719023_113719188_113721462_113721542_113725707_113725852_113728521_113728665_113730555_113730664_113732907_113733063_113735062
ES.36295.3	chr9	-	176	1	Intergenic	novelGene_29524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGTTAATTAAGG	NA	False	NA	NA	False	NA	NA	NA	113598105	113597929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113597900_113598100
ES.36295.4	chr9	-	5450	1	Intergenic	novelGene_29525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAGGAGCTGGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	113632964	113627514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113627500_113633000
ES.36295.5	chr9	-	5311	1	Antisense	novelGene_ENSMUSG00000033392.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACACA	4430	False	NA	NA	False	NA	NA	NA	113667375	113662064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_113662100_113667400
ES.36296.1	chr9	+	4459	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-211	0	intron_retention	TRUE	canonical	0	0	junction_5	136.625800546602	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1091	False	NA	20	True	AATAAA	-20	NA	113759790	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.10	chr9	+	3500	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	46	196	46	2	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATTCATTATCA	1348	False	NA	19	True	AATAAA	-20	NA	113760047	113806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.101	chr9	+	3694	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	224	-4	intron_retention	FALSE	canonical	1	4	junction_3	141.60637973625	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAACGTGTCACTCATT	1526	False	NA	16	True	AATAAA	-16	NA	113760225	113806263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.102	chr9	+	4119	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	226	0	intron_retention	FALSE	canonical	0	0	junction_13	132.474352542795	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1528	False	NA	20	True	AATAAA	-20	NA	113760227	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801975_113802586_113802639_113804413
ES.36296.103	chr9	+	3535	14	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	226	55	intron_retention	FALSE	canonical	3	224	junction_7	64.6973838674327	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGACTGAATCCAAGA	1528	False	NA	NA	False	AATAAA	-17	NA	113760227	113804506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.104	chr9	+	3337	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	228	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	158.683108391816	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1530	False	NA	15	True	AATAAA	-16	NA	113760229	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760286_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802632_113802710_113804413
ES.36296.106	chr9	+	4803	15	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	233	0	intron_retention	FALSE	canonical	3	42	junction_1	105.67443747044	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1535	False	NA	17	True	AATAAA	-18	NA	113760234	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.107	chr9	+	3474	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	233	0	intron_retention	FALSE	canonical	2	4	junction_14	125.069474026772	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1535	False	NA	20	True	AATAAA	-20	NA	113760234	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113802586_113802639_113804413
ES.36296.108	chr9	+	3564	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	233	-1	intron_retention	FALSE	canonical	2	5	junction_15	124.564557113526	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	1535	False	NA	19	True	AATAAA	-19	NA	113760234	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113804413
ES.36296.109	chr9	+	3912	15	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	233	0	intron_retention	FALSE	non_canonical	0	0	junction_1	114.895982239127	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1535	False	NA	17	True	AATAAA	-18	NA	113760234	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760299_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.11	chr9	+	4116	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	-673	-1820	47	1	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCACTCATTTCAAATCT	1349	False	NA	24	True	AATAAA	-24	NA	113760048	113806271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.110	chr9	+	3734	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	233	-1	intron_retention	FALSE	canonical	3	25	junction_11	133.567061807917	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	1535	False	NA	16	True	AATAAA	-17	NA	113760234	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.111	chr9	+	3608	15	NNC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	238	0	intron_retention	FALSE	canonical	2	13	junction_6	112.364748630048	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1540	False	NA	17	True	AATAAA	-18	NA	113760239	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787903_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.113	chr9	+	3585	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	239	-3	intron_retention	FALSE	canonical	1	3	junction_15	142.8301958402	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACGTGTCACTCATTT	1541	False	NA	17	True	AATAAA	-17	NA	113760240	113806264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802632_113802710_113804413
ES.36296.114	chr9	+	5554	14	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	239	0	intron_retention	FALSE	canonical	3	95	junction_1	98.2613349228902	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1541	False	NA	23	True	AATAAA	-23	NA	113760240	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113802639_113804413
ES.36296.115	chr9	+	3842	14	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	240	-2	intron_retention	FALSE	canonical	1	2	junction_11	141.818201817905	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1542	False	NA	15	True	AATAAA	-16	NA	113760241	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801962_113802586_113802639_113804413
ES.36296.116	chr9	+	3769	19	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	242	0	intron_retention	FALSE	canonical	0	0	junction_7	168.619714223134	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1544	False	NA	20	True	AATAAA	-20	NA	113760243	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.117	chr9	+	4507	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	242	-2	intron_retention	FALSE	canonical	0	0	junction_5	127.258721595898	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1544	False	NA	15	True	AATAAA	-16	NA	113760243	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.118	chr9	+	4201	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	242	0	intron_retention	FALSE	canonical	3	95	junction_1	92.3304692696596	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1544	False	NA	23	True	AATAAA	-23	NA	113760243	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.119	chr9	+	3696	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	244	-2	intron_retention	FALSE	canonical	0	0	junction_5	141.474237937513	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1546	False	NA	15	True	AATAAA	-16	NA	113760245	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.12	chr9	+	3804	15	FSM	ENSMUSG00000009741.16	ENSMUST00000214095.2	2320	15	-452	-1032	49	0	multi-exon	FALSE	canonical	3	191	junction_7	65.0304481275769	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1351	False	NA	17	True	AATAAA	-18	NA	113760050	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.120	chr9	+	3914	14	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	244	-4	intron_retention	FALSE	canonical	1	8	junction_5	132.802117328241	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTATTTTGAATTCA	1546	False	NA	13	True	AATAAA	-14	NA	113760245	113806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.121	chr9	+	3519	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	245	0	intron_retention	FALSE	canonical	1	8	junction_5	131.471602341427	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1547	False	NA	20	True	AATAAA	-20	NA	113760246	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.122	chr9	+	4555	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	245	-3	intron_retention	FALSE	canonical	1	6	junction_12	126.226498362622	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTATTTTGAATTCAT	1547	False	NA	14	True	AATAAA	-15	NA	113760246	113806066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799046_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.124	chr9	+	4447	14	FSM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	-450	0	245	0	multi-exon	FALSE	canonical	3	191	junction_6	61.6247471999328	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1547	False	NA	23	True	AATAAA	-23	NA	113760246	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.125	chr9	+	3557	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	245	0	intron_retention	FALSE	canonical	0	0	junction_15	124.227110567702	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1547	False	NA	20	True	AATAAA	-20	NA	113760246	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801914_113802586_113802639_113804413
ES.36296.126	chr9	+	4958	13	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-245	-2	intron_retention	FALSE	canonical	3	191	junction_6	64.0383457174076	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1558	False	NA	15	True	AATAAA	-16	NA	113760257	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.127	chr9	+	3304	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-239	-2	intron_retention	FALSE	canonical	1	4	junction_3	146.597543784847	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1564	False	NA	15	True	AATAAA	-16	NA	113760263	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.128	chr9	+	3508	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-239	-2	intron_retention	FALSE	canonical	3	95	junction_1	95.7738620556842	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACGTGTCACTCATTTC	1564	False	NA	18	True	AATAAA	-18	NA	113760263	113806265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.129	chr9	+	3063	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-239	0	intron_retention	FALSE	non_canonical	0	0	junction_1	114.712328750431	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1564	False	NA	17	True	AATAAA	-18	NA	113760263	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760307_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.13	chr9	+	4546	13	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_8	122.9228247045	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1351	False	NA	20	True	AATAAA	-20	NA	113760050	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.130	chr9	+	4177	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-239	0	intron_retention	FALSE	canonical	0	0	junction_11	151.496915993546	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1564	False	NA	23	True	AATAAA	-23	NA	113760263	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798989_113799046_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.131	chr9	+	3809	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-239	0	intron_retention	FALSE	canonical	0	0	junction_5	128.513380194005	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1564	False	NA	23	True	AATAAA	-23	NA	113760263	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.132	chr9	+	3386	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-235	-2	intron_retention	FALSE	canonical	0	0	junction_6	153.833056834349	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1568	False	NA	15	True	AATAAA	-16	NA	113760267	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.133	chr9	+	4097	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-228	0	intron_retention	FALSE	canonical	0	0	junction_5	162.783061955216	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1575	False	NA	20	True	AATAAA	-20	NA	113760274	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785518_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.134	chr9	+	4327	13	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	-159	0	intron_retention	FALSE	canonical	1	8	junction_4	119.441640793969	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1644	False	NA	20	True	AATAAA	-20	NA	113760343	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.135	chr9	+	3530	16	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-99	-2	intron_retention	FALSE	canonical	0	0	junction_13	110.810468819512	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1704	False	NA	15	True	AATAAA	-16	NA	113760403	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799302_113801818_113801962_113802586_113802639_113804413
ES.36296.136	chr9	+	3454	15	NNC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	-98	-2	intron_retention	FALSE	canonical	2	15	junction_4	111.606725713506	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1705	False	NA	15	True	AATAAA	-16	NA	113760404	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.137	chr9	+	3823	15	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-88	-1	intron_retention	FALSE	canonical	3	224	junction_7	66.0351251615535	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	1715	False	NA	19	True	AATAAA	-19	NA	113760414	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.138	chr9	+	4235	13	NIC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	-81	-1	intron_retention	FALSE	canonical	3	191	junction_6	68.8566849009997	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	1722	False	NA	16	True	AATAAA	-17	NA	113760421	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.139	chr9	+	4248	15	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-64	-1	intron_retention	FALSE	canonical	3	224	junction_8	66.9079477296065	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	1739	False	NA	16	True	AATAAA	-17	NA	113760438	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.140	chr9	+	3489	14	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-43	0	intron_retention	FALSE	canonical	1	8	junction_4	115.471352014665	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1760	False	NA	23	True	AATAAA	-23	NA	113760459	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.141	chr9	+	3771	16	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-39	0	intron_retention	FALSE	canonical	2	7	junction_15	109.069070878147	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1764	False	NA	23	True	AATAAA	-23	NA	113760463	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802710_113804413
ES.36296.143	chr9	+	3764	14	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_13	118.693878049336	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	2025	False	NA	23	True	AATAAA	-23	NA	113760724	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413_113804638_113805567
ES.36296.144	chr9	+	3467	15	NNC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	36	-4	intron_retention	FALSE	canonical	0	0	junction_4	114.895982239127	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTATTTTGAATTCA	2058	False	NA	13	True	AATAAA	-14	NA	113760757	113806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.145	chr9	+	3129	15	ISM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	13912	199	13192	-1	3prime_fragment	FALSE	canonical	3	224	junction_7	65.499961053112	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	NA	False	NA	16	True	AATAAA	-17	NA	113773913	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.146	chr9	+	3277	15	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-17605	0	intron_retention	FALSE	canonical	3	25	junction_10	134.487765925654	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	NA	False	NA	20	True	AATAAA	-20	NA	113780687	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.147	chr9	+	1515	12	ISM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	24700	13	-12871	-13	3prime_fragment	FALSE	canonical	3	224	junction_4	67.8756763356103	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGAAGTGATACCTTA	NA	False	NA	NA	False	NA	NA	NA	113785421	113804438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.148	chr9	+	1911	11	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-12848	53	intron_retention	FALSE	canonical	0	0	junction_1	133.132114833349	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGAAGACTGAATCCAA	NA	False	NA	NA	False	AATAAA	-15	NA	113785444	113804504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.149	chr9	+	3963	11	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	-11145	0	intron_retention	FALSE	canonical	1	6	junction_7	128.17601179628	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	NA	False	NA	20	True	AATAAA	-20	NA	113787147	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799046_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.15	chr9	+	3448	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	49	1	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1351	False	NA	18	True	AATAAA	-19	NA	113760050	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.150	chr9	+	12213	5	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-10946	65	intron_retention	FALSE	canonical	3	249	junction_1	64.464622080642	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCAAGAAGTCTTGGGA	NA	False	NA	NA	False	AATAAA	-27	NA	113787346	113804516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113788008_113788443_113793724_113795302_113795358_113795559_113795654_113798393
ES.36296.151	chr9	+	2597	10	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-10591	-1	intron_retention	FALSE	canonical	2	5	junction_9	131.65789937993	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	NA	False	NA	16	True	AATAAA	-17	NA	113787701	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113804413
ES.36296.152	chr9	+	6123	8	ISM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	29114	201	-8482	0	3prime_fragment	FALSE	canonical	3	373	junction_3	19.0627320996241	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	NA	False	NA	17	True	AATAAA	-18	NA	113789810	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.153	chr9	+	5933	7	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-7567	0	intron_retention	FALSE	canonical	3	373	junction_3	20.317616876877	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	NA	False	NA	17	True	AATAAA	-18	NA	113790725	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.154	chr9	+	4560	7	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-5997	-1	intron_retention	FALSE	canonical	3	373	junction_3	20.317616876877	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	NA	False	NA	19	True	AATAAA	-19	NA	113792295	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.155	chr9	+	5385	3	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-5347	0	intron_retention	TRUE	canonical	0	0	junction_1	214.5	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	109	False	NA	23	True	AATAAA	-23	NA	113792945	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113795654_113801818_113802639_113804413
ES.36296.156	chr9	+	3874	4	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	-989	-2	intron_retention	FALSE	canonical	3	381	junction_2	21.3541565040626	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	3951	False	NA	15	True	AATAAA	-16	NA	113797303	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.157	chr9	+	5562	2	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	438	-2	intron_retention	FALSE	canonical	3	429	junction_1	0	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	5378	False	NA	15	True	AATAAA	-16	NA	113798730	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113802639_113804413
ES.36296.158	chr9	+	5112	2	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	1091	0	intron_retention	FALSE	canonical	3	429	junction_1	0	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	6031	False	NA	23	True	AATAAA	-23	NA	113799383	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113802639_113804413
ES.36296.159	chr9	+	1994	4	ISM	ENSMUSG00000009741.16	ENSMUST00000116492.3	2111	16	40114	-182	2453	-2	3prime_fragment	FALSE	non_canonical	0	0	junction_3	191.921859098957	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	7393	False	NA	15	True	AATAAA	-16	NA	113800745	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_113801962_113802586_113802639_113804413_113804646_113805573
ES.36296.16	chr9	+	3763	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	49	0	intron_retention	FALSE	canonical	3	25	junction_12	140.973277055441	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1351	False	NA	23	True	AATAAA	-23	NA	113760050	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.160	chr9	+	3095	3	ISM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	40076	3	2480	0	3prime_fragment	FALSE	canonical	3	381	junction_1	24	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	7420	False	NA	20	True	AATAAA	-20	NA	113800772	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_113801962_113802586_113802639_113804413
ES.36296.161	chr9	+	3303	1	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	4474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	9414	False	NA	17	True	AATAAA	-18	NA	113802766	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113802800_113806100
ES.36296.17	chr9	+	4005	15	FSM	ENSMUSG00000009741.16	ENSMUST00000214095.2	2320	15	-452	-1233	49	0	multi-exon	FALSE	canonical	3	191	junction_7	65.0304481275769	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1351	False	NA	23	True	AATAAA	-23	NA	113760050	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.18	chr9	+	3633	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	65	1	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCACTCATTTCAAATCT	1367	False	NA	24	True	AATAAA	-24	NA	113760066	113806271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.19	chr9	+	3896	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	-653	-1620	67	2	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATTCATTATCA	1369	False	NA	19	True	AATAAA	-20	NA	113760068	113806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.2	chr9	+	4589	15	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	11	1	intron_retention	FALSE	canonical	3	224	junction_7	62.5713062621114	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1313	False	NA	18	True	AATAAA	-19	NA	113760012	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.20	chr9	+	4417	14	NIC	ENSMUSG00000009741.16	novel	2111	16	NA	NA	68	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	118.693878049336	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	1370	False	NA	19	True	AATAAA	-19	NA	113760069	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413_113804646_113805573
ES.36296.21	chr9	+	3538	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	68	2	intron_retention	FALSE	canonical	3	95	junction_1	91.3275141660497	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATTCATTATCA	1370	False	NA	19	True	AATAAA	-20	NA	113760069	113806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.22	chr9	+	3785	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	68	-3	68	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1370	False	NA	23	True	AATAAA	-23	NA	113760069	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.23	chr9	+	4733	15	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	69	-2	intron_retention	FALSE	canonical	3	25	junction_10	137.621208172198	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACGTGTCACTCATTTC	1371	False	NA	18	True	AATAAA	-18	NA	113760070	113806265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.24	chr9	+	3725	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	80	0	intron_retention	FALSE	canonical	3	95	junction_1	91.3275141660497	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1382	False	NA	23	True	AATAAA	-23	NA	113760081	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.25	chr9	+	3520	16	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	91	-4	intron_retention	FALSE	canonical	2	7	junction_15	125.618045412804	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTATTTTGAATTCA	1393	False	NA	13	True	AATAAA	-14	NA	113760092	113806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802710_113804413
ES.36296.26	chr9	+	4332	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	93	0	intron_retention	FALSE	canonical	0	0	junction_4	114.895982239127	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1395	False	NA	20	True	AATAAA	-20	NA	113760094	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.27	chr9	+	3583	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	96	0	intron_retention	FALSE	canonical	2	15	junction_5	128.701689965594	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1398	False	NA	17	True	AATAAA	-18	NA	113760097	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.28	chr9	+	3649	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	96	-3	96	0	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1398	False	NA	23	True	AATAAA	-23	NA	113760097	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.29	chr9	+	3773	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	101	0	intron_retention	FALSE	canonical	3	42	junction_1	101.01175674148	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1403	False	NA	23	True	AATAAA	-23	NA	113760102	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.3	chr9	+	3755	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	11	0	intron_retention	FALSE	canonical	3	42	junction_1	104.062673423279	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1313	False	NA	23	True	AATAAA	-23	NA	113760012	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.30	chr9	+	7355	14	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	102	0	intron_retention	FALSE	canonical	3	95	junction_1	96.5261714518292	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1404	False	NA	17	True	AATAAA	-18	NA	113760103	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113801962_113802586_113802639_113804413
ES.36296.31	chr9	+	4698	15	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	102	0	intron_retention	FALSE	canonical	3	224	junction_7	62.5713062621114	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1404	False	NA	23	True	AATAAA	-23	NA	113760103	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.32	chr9	+	3488	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	102	0	intron_retention	FALSE	non_canonical	0	0	junction_5	124.191824912109	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1404	False	NA	17	True	AATAAA	-18	NA	113760103	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785069_113785768_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.33	chr9	+	5006	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	102	0	intron_retention	TRUE	canonical	1	4	junction_3	154.455977187317	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1404	False	NA	17	True	AATAAA	-18	NA	113760103	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.34	chr9	+	3711	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	103	0	intron_retention	FALSE	canonical	1	4	junction_3	146.597543784847	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1405	False	NA	20	True	AATAAA	-20	NA	113760104	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.35	chr9	+	5454	13	NNC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	104	2	intron_retention	FALSE	canonical	2	3	junction_4	122.516977281609	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTGAATTCATTATCA	1406	False	NA	19	True	AATAAA	-20	NA	113760105	113806071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113802639_113804413
ES.36296.36	chr9	+	3448	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	118	1	intron_retention	FALSE	canonical	3	42	junction_1	104.062673423279	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1420	False	NA	18	True	AATAAA	-19	NA	113760119	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.37	chr9	+	3843	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	120	0	intron_retention	FALSE	canonical	0	0	junction_6	148.664155538141	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1422	False	NA	23	True	AATAAA	-23	NA	113760121	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.38	chr9	+	3507	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	191	0	intron_retention	FALSE	canonical	1	8	junction_5	124.350293749374	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1493	False	NA	23	True	AATAAA	-23	NA	113760192	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.39	chr9	+	2151	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	191	-191	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	104.062673423279	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGTGCCAGTTTGG	1493	False	NA	NA	False	NA	NA	NA	113760192	113804846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.4	chr9	+	3164	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	163.871413004221	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1330	False	NA	23	True	AATAAA	-23	NA	113760029	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801914_113805002
ES.36296.40	chr9	+	4666	14	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	191	-2	intron_retention	FALSE	canonical	3	95	junction_1	97.9289079175151	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1493	False	NA	15	True	AATAAA	-16	NA	113760192	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.41	chr9	+	6709	14	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	191	0	intron_retention	FALSE	canonical	3	95	junction_1	96.5604939614688	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1493	False	NA	23	True	AATAAA	-23	NA	113760192	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113802639_113804413
ES.36296.42	chr9	+	3547	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	192	-2	intron_retention	FALSE	canonical	0	0	junction_6	143.44831363638	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1494	False	NA	15	True	AATAAA	-16	NA	113760193	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785421_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.43	chr9	+	4410	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	192	-1	intron_retention	FALSE	canonical	3	25	junction_12	140.07944174646	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	1494	False	NA	19	True	AATAAA	-19	NA	113760193	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.44	chr9	+	3094	14	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	192	-2	intron_retention	FALSE	canonical	0	0	junction_12	156.721288056784	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1494	False	NA	15	True	AATAAA	-16	NA	113760193	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113802586_113802639_113804413
ES.36296.45	chr9	+	1795	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	196	1751	196	65	multi-exon	FALSE	canonical	3	95	junction_1	93.8633522142103	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCAAGAAGTCTTGGGA	1498	False	NA	NA	False	AATAAA	-27	NA	113760197	113804516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.46	chr9	+	4172	15	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	196	0	intron_retention	FALSE	canonical	3	95	junction_1	94.1734450633619	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1498	False	NA	17	True	AATAAA	-18	NA	113760197	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.47	chr9	+	4877	14	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	196	0	intron_retention	FALSE	canonical	2	4	junction_12	132.286670959736	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1498	False	NA	23	True	AATAAA	-23	NA	113760197	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113802586_113802639_113804413
ES.36296.48	chr9	+	3528	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	196	0	intron_retention	FALSE	canonical	1	4	junction_3	141.60637973625	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1498	False	NA	17	True	AATAAA	-18	NA	113760197	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.49	chr9	+	4320	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	196	0	intron_retention	FALSE	canonical	1	3	junction_14	147.394346341145	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1498	False	NA	23	True	AATAAA	-23	NA	113760197	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802632_113802710_113804413
ES.36296.5	chr9	+	3633	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	40	0	intron_retention	FALSE	canonical	3	42	junction_1	101.01175674148	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1342	False	NA	17	True	AATAAA	-18	NA	113760041	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.50	chr9	+	4108	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	200	-3	intron_retention	FALSE	canonical	3	42	junction_1	102.689045180097	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTATTTTGAATTCAT	1502	False	NA	14	True	AATAAA	-15	NA	113760201	113806066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.51	chr9	+	4133	15	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	202	0	intron_retention	FALSE	canonical	3	95	junction_1	94.7980668019541	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1504	False	NA	23	True	AATAAA	-23	NA	113760203	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.53	chr9	+	3268	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	203	-1	intron_retention	FALSE	canonical	1	7	junction_5	129.324303633169	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	1505	False	NA	16	True	AATAAA	-17	NA	113760204	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785172_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.54	chr9	+	3454	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	205	0	intron_retention	FALSE	canonical	1	8	junction_5	136.581066605522	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1507	False	NA	23	True	AATAAA	-23	NA	113760206	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.56	chr9	+	4112	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	206	0	intron_retention	FALSE	canonical	3	25	junction_11	151.14760997118	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1508	False	NA	17	True	AATAAA	-18	NA	113760207	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.57	chr9	+	5118	14	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	206	0	intron_retention	FALSE	canonical	3	224	junction_7	64.6973838674327	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1508	False	NA	17	True	AATAAA	-18	NA	113760207	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.58	chr9	+	4285	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	206	0	intron_retention	FALSE	canonical	3	95	junction_1	92.3304692696596	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1508	False	NA	23	True	AATAAA	-23	NA	113760207	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.59	chr9	+	4902	14	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	206	0	intron_retention	FALSE	canonical	3	95	junction_1	97.9289079175151	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1508	False	NA	23	True	AATAAA	-23	NA	113760207	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.6	chr9	+	4447	14	FSM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	-650	200	45	1	multi-exon	FALSE	canonical	3	191	junction_6	61.6247471999328	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1347	False	NA	18	True	AATAAA	-19	NA	113760046	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.60	chr9	+	3925	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	207	-2	intron_retention	FALSE	canonical	3	95	junction_1	94.7980668019541	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1509	False	NA	15	True	AATAAA	-16	NA	113760208	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.61	chr9	+	8609	12	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	207	0	intron_retention	FALSE	canonical	3	95	junction_1	101.797725217728	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1509	False	NA	17	True	AATAAA	-18	NA	113760208	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788552_113793619_113793724_113795302_113795358_113795559_113799329_113801818_113802639_113804413
ES.36296.62	chr9	+	4359	13	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	208	-3	intron_retention	FALSE	canonical	1	2	junction_10	121.191194216228	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACGTGTCACTCATTT	1510	False	NA	17	True	AATAAA	-17	NA	113760209	113806264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801962_113802586_113802639_113804413
ES.36296.63	chr9	+	1951	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	209	59	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	136.125425574686	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGAATCCAAGAAGTC	1511	False	NA	NA	False	AATAAA	-21	NA	113760210	113804510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.64	chr9	+	4182	15	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	209	0	intron_retention	FALSE	canonical	0	0	junction_8	157.788608264219	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1511	False	NA	23	True	AATAAA	-23	NA	113760210	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788550_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801962_113802586_113802639_113804413
ES.36296.65	chr9	+	3407	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	210	1	intron_retention	FALSE	canonical	1	4	junction_3	146.597543784847	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1512	False	NA	18	True	AATAAA	-19	NA	113760211	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.66	chr9	+	4080	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	210	0	intron_retention	FALSE	canonical	3	95	junction_1	92.3304692696596	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1512	False	NA	17	True	AATAAA	-18	NA	113760211	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.67	chr9	+	1751	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	210	-1800	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	92.0194665395438	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTTGGTGTGTTGTG	1512	False	NA	NA	False	AGTAAA	-16	NA	113760211	113802651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586
ES.36296.68	chr9	+	3554	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	210	0	intron_retention	FALSE	non_canonical	0	0	junction_1	138.88934044371	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1512	False	NA	23	True	AATAAA	-23	NA	113760211	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760284_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802710_113804413
ES.36296.69	chr9	+	4694	14	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	210	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	118.693878049336	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTATTTTGAATTCA	1512	False	NA	13	True	AATAAA	-14	NA	113760211	113806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760289_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.7	chr9	+	4578	15	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	45	-2	intron_retention	FALSE	canonical	0	0	junction_1	113.393593923366	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1347	False	NA	15	True	AATAAA	-16	NA	113760046	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773889_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.71	chr9	+	5205	13	NIC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	212	0	intron_retention	FALSE	canonical	3	191	junction_6	64.0383457174076	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1514	False	NA	23	True	AATAAA	-23	NA	113760213	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.72	chr9	+	3408	15	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	212	-2	intron_retention	FALSE	canonical	3	95	junction_1	95.7738620556842	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1514	False	NA	15	True	AATAAA	-16	NA	113760213	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.73	chr9	+	4697	16	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	212	-3	intron_retention	FALSE	canonical	3	25	junction_11	132.538296352413	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACGTGTCACTCATTT	1514	False	NA	17	True	AATAAA	-17	NA	113760213	113806264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.74	chr9	+	4804	15	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	213	-2	intron_retention	TRUE	canonical	0	0	junction_11	131.183719902078	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1515	False	NA	15	True	AATAAA	-16	NA	113760214	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795658_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.75	chr9	+	5009	14	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	213	-2	intron_retention	FALSE	canonical	3	224	junction_7	64.9086750340396	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1515	False	NA	15	True	AATAAA	-16	NA	113760214	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113802639_113804413
ES.36296.76	chr9	+	3415	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	213	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	180.670625725379	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1515	False	NA	15	True	AATAAA	-16	NA	113760214	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113775093_113775166_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795643_113798393_113798485_113799209_113799329_113801818_113801962_113802632_113802710_113804413
ES.36296.77	chr9	+	3526	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	213	-4	intron_retention	FALSE	canonical	1	8	junction_5	124.350293749374	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAACGTGTCACTCATT	1515	False	NA	16	True	AATAAA	-16	NA	113760214	113806263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.78	chr9	+	4285	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	213	0	intron_retention	FALSE	canonical	3	25	junction_11	145.325320880048	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1515	False	NA	23	True	AATAAA	-23	NA	113760214	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113798651_113798767_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.79	chr9	+	4191	15	NNC	ENSMUSG00000009741.16	novel	3997	14	NA	NA	213	0	intron_retention	FALSE	canonical	3	42	junction_1	105.783881531341	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1515	False	NA	23	True	AATAAA	-23	NA	113760214	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.8	chr9	+	3607	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	46	197	46	1	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTGAATTCATTATC	1348	False	NA	18	True	AATAAA	-19	NA	113760047	113806070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.80	chr9	+	3330	16	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	213	-2	intron_retention	FALSE	canonical	1	8	junction_5	124.350293749374	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1515	False	NA	15	True	AATAAA	-16	NA	113760214	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.81	chr9	+	3351	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	214	-2	intron_retention	FALSE	canonical	2	7	junction_15	125.618045412804	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1516	False	NA	15	True	AATAAA	-16	NA	113760215	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802710_113804413
ES.36296.82	chr9	+	3553	16	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	214	0	intron_retention	FALSE	canonical	1	3	junction_14	148.287468564722	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1516	False	NA	20	True	AATAAA	-20	NA	113760215	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802632_113802710_113804413
ES.36296.83	chr9	+	3394	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	214	-2	intron_retention	FALSE	canonical	2	15	junction_5	121.699537155036	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1516	False	NA	15	True	AATAAA	-16	NA	113760215	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.84	chr9	+	6387	13	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	214	0	intron_retention	FALSE	canonical	1	2	junction_11	141.70764113327	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1516	False	NA	17	True	AATAAA	-18	NA	113760215	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113802639_113804413
ES.36296.85	chr9	+	3420	15	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	215	0	intron_retention	FALSE	canonical	1	8	junction_5	129.145326303829	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1517	False	NA	20	True	AATAAA	-20	NA	113760216	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.87	chr9	+	5207	14	NIC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	215	0	intron_retention	FALSE	canonical	3	224	junction_7	64.9086750340396	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1517	False	NA	20	True	AATAAA	-20	NA	113760216	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113802639_113804413
ES.36296.88	chr9	+	4947	15	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	215	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	114.585967192981	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGTGTCACTCATTTCA	1517	False	NA	19	True	AATAAA	-19	NA	113760216	113806266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760286_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.89	chr9	+	3398	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	215	-2	intron_retention	FALSE	canonical	0	0	junction_6	148.171762133512	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATTTTGAATTCATT	1517	False	NA	15	True	AATAAA	-16	NA	113760216	113806067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785439_113785511_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.9	chr9	+	3435	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	46	-4	intron_retention	FALSE	canonical	1	2	junction_13	124.94681535224	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATTATTTTGAATTCA	1348	False	NA	13	True	AATAAA	-14	NA	113760047	113806065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801962_113802586_113802639_113804413
ES.36296.90	chr9	+	3170	14	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	215	-1	intron_retention	FALSE	canonical	0	0	junction_13	153.937741968521	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTTGAATTCATTA	1517	False	NA	16	True	AATAAA	-17	NA	113760216	113806068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801975_113804413
ES.36296.91	chr9	+	3229	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	215	0	intron_retention	FALSE	canonical	2	5	junction_14	129.542523157929	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1517	False	NA	17	True	AATAAA	-18	NA	113760216	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113804413
ES.36296.92	chr9	+	4306	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	215	824	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCATCTGTTTGTTATT	1517	False	NA	NA	False	AATAAA	-16	NA	113760216	113807094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.93	chr9	+	2731	18	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	127.702373485271	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1517	False	NA	23	True	AATAAA	-23	NA	113760216	113806270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413_113804646_113805573
ES.36296.94	chr9	+	4026	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	216	0	intron_retention	FALSE	canonical	3	95	junction_1	92.3304692696596	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1518	False	NA	17	True	AATAAA	-18	NA	113760217	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.95	chr9	+	4163	15	NIC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	217	0	intron_retention	FALSE	canonical	3	95	junction_1	94.7980668019541	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1519	False	NA	20	True	AATAAA	-20	NA	113760218	113806267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36296.97	chr9	+	3344	15	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	220	0	intron_retention	FALSE	non_canonical	0	0	junction_1	140.027985541083	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1522	False	NA	17	True	AATAAA	-18	NA	113760221	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760289_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113801818_113801962_113802586_113802639_113804413
ES.36296.99	chr9	+	3981	15	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	222	0	intron_retention	FALSE	canonical	3	42	junction_1	105.783881531341	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1524	False	NA	17	True	AATAAA	-18	NA	113760223	113806069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ES.36297.1	chr9	+	8816	2	Antisense	novelGene_ENSMUSG00000032507.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	113836738	113846718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_113840567_113841730
ES.36298.1	chr9	+	196	1	Intergenic	novelGene_29529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACATACTACTTACTAA	NA	False	NA	NA	False	NA	NA	NA	113860999	113861195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_113861000_113861200
ES.36299.1	chr9	-	4172	1	Intergenic	novelGene_29528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAGAAAGGACAGAGGC	NA	False	NA	NA	False	NA	NA	NA	113769932	113765760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_113765800_113769900
ES.363.1	chr1	-	226	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACGATGTTGCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	39947904	39947678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39947700_39947900
ES.3630.1	chr10	+	151	1	Intergenic	novelGene_2768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	95006387	95006538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95006400_95006500
ES.36300.1	chr9	-	3493	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	-18	-11	-5	11	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGTCTGTCTTCTGGAA	NA	False	NA	NA	False	AATAAA	-28	NA	113855847	113805763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ES.36300.10	chr9	-	3356	14	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-4	-13	intron_retention	FALSE	canonical	3	6	junction_13	11.4592150458684	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACAAACAGATGCA	NA	False	NA	-25	True	NA	NA	NA	113875263	113807117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
ES.36300.11	chr9	-	2252	15	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-6	-13	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	13.9395561080615	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACAAACAGATGCA	NA	False	NA	-25	True	NA	NA	NA	113875265	113807117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813185_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
ES.36300.12	chr9	-	2160	15	NNC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	3	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.5973758200278	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACAAACAGATGCA	NA	False	NA	-25	True	NA	NA	NA	113855791	113807117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113808009_113808525_113808739_113813052_113813187_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ES.36300.13	chr9	-	2297	16	FSM	ENSMUSG00000032507.16	ENSMUST00000143180.8	2257	16	-53	13	-5	-13	multi-exon	FALSE	canonical	1	1	junction_14	14.1254695103876	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACAAACAGATGCA	NA	False	NA	-25	True	NA	NA	NA	113855847	113807117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113833104_113833263_113847056_113847119_113855760
ES.36300.14	chr9	-	1884	15	NNC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-25	-344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.5182854443938	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGGCTGGTAGTTTC	NA	False	NA	NA	False	ACTAAA	-34	NA	113875284	113807448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819801_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
ES.36300.15	chr9	-	1744	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	22	1698	-10	-368	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACGTGATTGTACTGC	NA	False	NA	NA	False	ACTAAA	-10	NA	113855807	113807472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ES.36300.16	chr9	-	3542	2	NNC	ENSMUSG00000032507.16	novel	394	4	NA	NA	-1496	-39804	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTCTTTCTTAATCA	NA	False	NA	NA	False	NA	NA	NA	113876755	113872313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113875625_113876524
ES.36300.17	chr9	-	2081	2	NNC	ENSMUSG00000032507.16	novel	394	4	NA	NA	-615	-41115	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTCTCTCTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	113875874	113873624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113875625_113875793
ES.36300.2	chr9	-	3371	14	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-10	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	13.0882304055181	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGAAGTAGTCTGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	113855807	113805770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832509_113832565_113847056_113847119_113855760
ES.36300.3	chr9	-	2143	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	4	1317	4	13	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGTGGTTTTTATTTA	NA	False	NA	1	True	AGTAAA	-24	NA	113855825	113807091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ES.36300.4	chr9	-	2202	15	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-6	12	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	11.0628999408853	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGTGGTTTTTATTT	NA	False	NA	0	True	AGTAAA	-23	NA	113875265	113807092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
ES.36300.5	chr9	-	2011	13	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	3	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	12.9494208364699	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGATGTGGTTTTTAT	NA	False	NA	-2	True	AGTAAA	-21	NA	113855826	113807094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113847056_113847119_113855760
ES.36300.6	chr9	-	2441	16	NNC	ENSMUSG00000032507.16	novel	2257	16	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.4745529270422	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGATGTGGTTTTTAT	NA	False	NA	-2	True	AGTAAA	-21	NA	113875271	113807094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113808009_113808525_113808739_113813052_113813187_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113833104_113833263_113847056_113847119_113875140
ES.36300.7	chr9	-	2218	15	NNC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-6	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.5182854443938	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGGATGTGGTTTTTA	NA	False	NA	-3	True	AGTAAA	-20	NA	113875265	113807095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819801_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
ES.36300.8	chr9	-	2132	15	NNC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.6670470762784	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGAATGGATGTGGTTT	NA	False	NA	-6	True	AGTAAA	-17	NA	113855802	113807098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819801_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ES.36300.9	chr9	-	1859	12	NIC	ENSMUSG00000032507.16	novel	3464	15	NA	NA	2	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	13.4237977900234	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAACAAACAGATGCA	NA	False	NA	-25	True	NA	NA	NA	113855792	113807117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113847056_113847119_113855760
ES.36301.1	chr9	+	3881	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	204	-2	204	2	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTATTGAATTTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	113886411	113927798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
ES.36301.2	chr9	+	3601	4	NIC	ENSMUSG00000086596.3	novel	4083	5	NA	NA	297	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTATTGAATTTCTACA	NA	False	NA	NA	False	AATAAA	-23	NA	113886504	113927800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_113886713_113893023_113893202_113897824_113897944_113924704
ES.36302.1	chr9	-	161	1	Intergenic	novelGene_29530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGTCAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	114041122	114040961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114041000_114041100
ES.36303.1	chr9	+	176	1	Intergenic	novelGene_29531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114190492	114190668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114190500_114190700
ES.36303.10	chr9	+	201	1	Intergenic	novelGene_29537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	114221088	114221289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114221100_114221300
ES.36303.11	chr9	+	3524	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	-270	-333	-270	333	multi-exon	FALSE	canonical	3	40	junction_1	0	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTAGTTAGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	114229902	114236677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114230338_114233588
ES.36303.12	chr9	+	2438	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	-40	-2	-40	2	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230103	114303447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.13	chr9	+	2211	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230159	114303446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.14	chr9	+	6862	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	-13	-3928	-13	3928	multi-exon	FALSE	canonical	3	40	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGTCCATTCTTCAGA	NA	False	NA	16	True	AATAAA	-24	NA	114230159	114240272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114230338_114233588
ES.36303.15	chr9	+	2789	16	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-16	13942	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	100.847651875931	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACCTGAACCAAGCC	NA	False	NA	NA	False	NA	NA	NA	114230159	114317908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114316959
ES.36303.16	chr9	+	6668	3	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	-12	3928	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	20	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGTCCATTCTTCAGA	NA	False	NA	16	True	AATAAA	-24	NA	114230160	114240272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114233588_114236495_114236687
ES.36303.17	chr9	+	2135	14	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.444770845757	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGTCCTGTCATTA	NA	False	NA	23	True	AATAAA	-14	NA	114230160	114303444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114249420_114249572_114253024_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.18	chr9	+	1904	12	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	110.549342036909	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTCCTGTCATTAATA	NA	False	NA	26	True	AATAAA	-17	NA	114230160	114303447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.19	chr9	+	1955	14	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-15	-9793	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	79.5849440133589	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTACTTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	114230160	114293652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111
ES.36303.2	chr9	+	173	2	Intergenic	novelGene_29532	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	114190493	114350052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114190639_114350024
ES.36303.20	chr9	+	2344	10	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	27	30072	-5	-30072	5prime_fragment	FALSE	canonical	3	295	junction_2	41.9046536795139	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCCTCTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	114230170	114273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.21	chr9	+	2273	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	104.522456331408	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGGGGGTCCTGTCA	NA	False	NA	20	True	AATAAA	-11	NA	114230172	114303441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.22	chr9	+	2529	10	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	11	-29873	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	121.657483164319	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTTTCTGTTTTGCA	NA	False	NA	14	True	AATACA	-21	NA	114230186	114273572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250754_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.23	chr9	+	6637	3	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	17	3926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGGTGTCCATTCTTCA	NA	False	NA	14	True	AATAAA	-22	NA	114230189	114240270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114233588_114236487_114236679
ES.36303.25	chr9	+	1506	7	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	22	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	145.204166606885	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230197	114303446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114246028_114246199_114249420_114249572_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.26	chr9	+	2789	9	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	57	34624	25	-34624	5prime_fragment	FALSE	canonical	3	295	junction_2	34.2105155617392	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTTATTTATTTACTT	NA	False	NA	NA	False	AATAAA	-24	NA	114230200	114268821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008
ES.36303.27	chr9	+	3712	3	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	30	1014	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGATGGGCTCATTCG	NA	False	NA	NA	False	AATAAA	-15	NA	114230202	114237358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114233588_114236485_114236677
ES.36303.28	chr9	+	6059	12	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	37	-18747	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	111.256683335325	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTCTCTCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	114230212	114284698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114255957_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255
ES.36303.3	chr9	+	176	2	Antisense	novelGene_ENSMUSG00000032431.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATAAATAAATAAA	NA	False	NA	5	True	NA	NA	NA	114190493	114211097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114190590_114211017
ES.36303.30	chr9	+	1514	13	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	38	-18747	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	107.362670680063	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTCTCTCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	114230213	114284698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283315_114284435
ES.36303.31	chr9	+	2322	9	ISM	ENSMUSG00000045594.11	ENSMUST00000217583.2	2806	15	40	30400	40	-29879	5prime_fragment	FALSE	canonical	3	112	junction_1	94.1361215209125	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGAGTCTGGTTTCTGT	NA	False	NA	8	True	AATACA	-15	NA	114230215	114273566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.32	chr9	+	2099	9	NNC	ENSMUSG00000045594.11	novel	2806	15	NA	NA	41	-30099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.604911241063	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114230216	114273346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114249420_114249572_114250758_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.34	chr9	+	2076	10	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	74	30293	42	-30293	5prime_fragment	FALSE	canonical	3	295	junction_2	41.9046536795139	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTTTCTCTTTTTT	NA	False	NA	NA	False	AAGAAA	-22	NA	114230217	114273152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.35	chr9	+	3584	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	45	-708	45	708	multi-exon	FALSE	canonical	3	40	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTACTCTGCTTCTGTAAA	NA	False	NA	NA	False	NA	NA	NA	114230217	114237052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114230338_114233588
ES.36303.36	chr9	+	2145	16	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	100.15885160861	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230217	114303445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293190_114302905
ES.36303.37	chr9	+	2000	14	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	42	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	107.612992770472	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGTCCTGTCATTA	NA	False	NA	23	True	AATAAA	-14	NA	114230217	114303444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114230338_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.38	chr9	+	2152	12	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	42	13948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	145.543779446382	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAACCAAGCCTACACT	NA	False	NA	NA	False	NA	NA	NA	114230217	114317914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114273156_114305270_114305306_114317876
ES.36303.39	chr9	+	2266	16	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	44	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	143.315967940305	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114230219	114303446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114249420_114249572_114249936_114250052_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.4	chr9	+	3577	2	FSM	ENSMUSG00000074039.11	ENSMUST00000131898.2	2660	2	-489	-428	-376	428	multi-exon	FALSE	canonical	3	21	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTTCTTTGCAATAAG	NA	False	NA	NA	False	AATAAA	-17	NA	114196994	114200660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114197968_114198056
ES.36303.40	chr9	+	2274	10	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	54	-30072	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	121.567945742695	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCCTCTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	114230229	114273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259546_114263463_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.41	chr9	+	6599	3	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	345	3928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGTCCATTCTTCAGA	NA	False	NA	16	True	AATAAA	-24	NA	114230517	114240272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230626_114233588_114236495_114236687
ES.36303.42	chr9	+	6790	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	345	3926	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGGTGTCCATTCTTCA	NA	False	NA	14	True	AATAAA	-22	NA	114230517	114240270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230626_114233588
ES.36303.43	chr9	+	3197	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	345	333	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTAGTTAGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	114230517	114236677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114230626_114233588
ES.36303.44	chr9	+	3114	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	942	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTAGTTAGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	114231114	114236677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114231140_114233588
ES.36303.45	chr9	+	3258	1	Genic_Genomic	ENSMUSG00000079260.4	novel	NA	NA	NA	NA	3239	325	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAACATCTAGTT	NA	False	NA	NA	False	NA	NA	NA	114233411	114236669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_114233400_114236700
ES.36303.46	chr9	+	1500	1	Genic_Genomic	ENSMUSG00000079260.4	novel	NA	NA	NA	NA	4863	191	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGCAGAGGCAGGCGGA	NA	False	NA	NA	False	NA	NA	NA	114235035	114236535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_114235000_114236500
ES.36303.47	chr9	+	3944	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	5960	3926	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGGTGTCCATTCTTCA	NA	False	NA	14	True	AATAAA	-22	NA	114236132	114240270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114236485_114236678
ES.36303.49	chr9	+	1969	14	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	19298	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	107.394037497157	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGGGGGTCCTGTCA	NA	False	NA	20	True	AATAAA	-11	NA	114249473	114303441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302911
ES.36303.5	chr9	+	1342	4	NNC	ENSMUSG00000074039.11	novel	1285	4	NA	NA	-50	-47	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	6.37704215656966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGAAAACAACAAACA	NA	False	NA	NA	False	NA	NA	NA	114197320	114206250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114197553_114197857_114197968_114198056_114198132_114205325
ES.36303.50	chr9	+	1420	8	NNC	ENSMUSG00000045594.11	novel	2806	15	NA	NA	20617	-29467	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	137.421591744351	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCAGCTTATAATTGTA	NA	False	NA	NA	False	NA	NA	NA	114250792	114273978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272938_114273942
ES.36303.51	chr9	+	5974	11	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	24987	1	24955	-1	3prime_fragment	FALSE	canonical	3	319	junction_2	36.8570210407732	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGTCCTGTCATTA	NA	False	NA	23	True	AATAAA	-14	NA	114255130	114303444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.52	chr9	+	4163	5	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	26774	30072	26742	-30072	internal_fragment	FALSE	canonical	3	319	junction_2	45.4147553114624	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCCTCTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	114256917	114273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076
ES.36303.53	chr9	+	3237	8	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	38817	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.769519678627	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGGGGTCCTGTCATT	NA	False	NA	22	True	AATAAA	-13	NA	114268992	114303443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114270910_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.54	chr9	+	3543	2	Genic_Genomic	ENSMUSG00000045594.11	novel	2396	16	NA	NA	39615	-30072	multi-exon	FALSE	non_canonical	0	0	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCCTCTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	114269790	114273373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_114270381_114270420
ES.36303.55	chr9	+	1310	7	NNC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	47787	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	148.635366660234	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114277962	114303445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114278064_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ES.36303.56	chr9	+	5563	1	NIC	ENSMUSG00000045594.11	novel	2806	15	NA	NA	67708	1	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	False	NA	25	True	AATAAA	-16	NA	114297883	114303446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114297900_114303400
ES.36303.57	chr9	+	185	1	Intergenic	novelGene_29540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	114323156	114323341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114323200_114323300
ES.36303.58	chr9	+	289	1	Intergenic	novelGene_29541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAGTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	114323164	114323453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114323200_114323500
ES.36303.59	chr9	+	177	1	Intergenic	novelGene_29543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAATAA	2835	False	NA	NA	False	NA	NA	NA	114332892	114333069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114332900_114333100
ES.36303.6	chr9	+	1280	4	FSM	ENSMUSG00000074039.11	ENSMUST00000124664.8	1285	4	-42	47	-42	-47	multi-exon	FALSE	canonical	3	8	junction_3	6.12825877028341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAGAAAACAACAAACA	NA	False	NA	NA	False	NA	NA	NA	114197328	114206250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114197553_114197911_114197968_114198056_114198132_114205325
ES.36303.60	chr9	+	5032	1	Antisense	novelGene_ENSMUSG00000079259.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTGAGGTAGGACTT	6443	False	NA	NA	False	NA	NA	NA	114336500	114341532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114336500_114341500
ES.36303.7	chr9	+	2835	3	NNC	ENSMUSG00000074039.11	novel	1285	4	NA	NA	-13	467	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTCTGCTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	114197470	114200699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114197553_114197857_114197968_114198056
ES.36303.8	chr9	+	256	1	Intergenic	novelGene_29534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAGAGGTCCCAGGC	NA	False	NA	83	True	NA	NA	NA	114210919	114211175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114210900_114211200
ES.36303.9	chr9	+	163	1	Intergenic	novelGene_29535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAACTGTAGAATT	NA	False	NA	NA	False	NA	NA	NA	114212654	114212817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114212700_114212800
ES.36304.1	chr9	+	4462	3	Antisense	novelGene_ENSMUSG00000079259.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCACCTGCTGCTTGAT	NA	False	NA	NA	False	NA	NA	NA	114354211	114358796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114354411_114354458_114356978_114357052
ES.36305.1	chr9	+	1075	2	Antisense	novelGene_ENSMUSG00000079259.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	2385	False	NA	NA	False	NA	NA	NA	114392545	114393670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114392566_114392615
ES.36306.1	chr9	-	87	1	Intergenic	novelGene_29533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATATGTCTAACCTCAT	NA	False	NA	-5	True	AATAAA	-43	NA	114202671	114202584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114202600_114202700
ES.36307.1	chr9	-	4504	8	NNC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	-4729	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	215.716556279441	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTCCTTCCAGACGTT	NA	False	NA	NA	False	GATAAA	-25	NA	114224472	114204196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199_114219893_114221796
ES.36307.3	chr9	-	3422	6	NIC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	30	-8	intron_retention	FALSE	canonical	3	526	junction_4	45.2680903065283	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTTGGTCTCTCCGT	NA	False	NA	NA	False	GATAAA	-12	NA	114219713	114204209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114204651_114207107_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ES.36307.4	chr9	-	1498	6	NIC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	22	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	239.544066927152	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTTGGTCTCTCCGT	NA	False	NA	NA	False	GATAAA	-12	NA	114219721	114204209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114204651_114207107_114207192_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ES.36307.5	chr9	-	5075	3	NIC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	-5311	-8	intron_retention	FALSE	canonical	3	611	junction_2	22.5	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTTTGGTCTCTCCGT	NA	False	NA	NA	False	GATAAA	-12	NA	114212600	114204209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114207192_114208977_114209124_114210653
ES.36307.6	chr9	-	1359	6	NNC	ENSMUSG00000032431.7	novel	1674	7	NA	NA	4	-4350	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	231.586355383904	260	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTCTTATATTTTG	NA	False	NA	NA	False	NA	NA	NA	114219739	114208567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114208790_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ES.36307.7	chr9	-	158	1	Intergenic	novelGene_29536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	114217020	114216862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114216900_114217000
ES.36308.1	chr9	-	5869	5	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114267319	114251197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114251401_114254387_114259559_114263465_114263527_114266805_114266929_114267008
ES.36309.1	chr9	-	2432	2	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGCAATTATTGTTCA	NA	False	NA	NA	False	CATAAA	-33	NA	114274151	114270981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114273202_114273939
ES.36309.3	chr9	-	2474	6	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGCAATTATTGTTCA	NA	False	NA	NA	False	CATAAA	-33	NA	114293965	114270981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114272189_114279663_114279738_114283253_114283343_114285495_114285613_114288659_114288793_114293111
ES.36309.4	chr9	-	3320	1	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGCAATTATTGTTCA	NA	False	NA	NA	False	CATAAA	-33	NA	114274301	114270981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114271000_114274300
ES.36309.7	chr9	-	4972	1	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCGGCTGTGATGTGTG	NA	False	NA	NA	False	NA	NA	NA	114294412	114289440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114289400_114294400
ES.3631.1	chr10	+	2365	1	Intergenic	novelGene_2771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTCAGTGTGGTTCA	NA	False	NA	NA	False	TATAAA	-16	NA	95059457	95061822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95059500_95061800
ES.36310.1	chr9	-	267	1	Intergenic	novelGene_29538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	114314873	114314606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114314600_114314900
ES.36311.1	chr9	-	2309	4	NNC	ENSMUSG00000047898.8	novel	339	3	NA	NA	2822	872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGATCGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-27	NA	114331162	114318511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114318853_114320580_114322124_114325565_114325705_114330876
ES.36311.2	chr9	-	240	1	Intergenic	novelGene_29539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCTATCCATGAGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	114322574	114322334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114322300_114322600
ES.36312.1	chr9	-	177	1	Intergenic	novelGene_29542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCCCGAT	NA	False	NA	NA	False	NA	NA	NA	114331720	114331543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114331500_114331700
ES.36313.1	chr9	-	9334	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCCGTGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	114393439	114336200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ES.36313.10	chr9	-	3890	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	14	5428	14	-5428	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTCTTTTTCTTTTTC	NA	False	NA	NA	False	AAGAAA	-11	NA	114393423	114341628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ES.36313.11	chr9	-	178	1	Intergenic	novelGene_29544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTAAATTTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	114343679	114343501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114343500_114343700
ES.36313.12	chr9	-	6236	1	NIC	ENSMUSG00000079259.3	novel	9332	4	NA	NA	77	-50924	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGAAATAGGAATCTCG	NA	False	NA	NA	False	NA	NA	NA	114393360	114387124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114387100_114393400
ES.36313.2	chr9	-	4926	2	NNC	ENSMUSG00000079259.3	novel	9332	4	NA	NA	51699	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGGTGTCCGTGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	114341738	114336204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114337439_114338046
ES.36313.4	chr9	-	7355	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	841	1136	841	-1136	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTATTTTTAAAACT	NA	False	NA	NA	False	AATAAA	-25	NA	114392596	114337336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ES.36313.5	chr9	-	3359	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	51672	2206	51672	-2206	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCTTGTTTTCCCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	114341765	114338406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_114338400_114341800
ES.36313.6	chr9	-	5174	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	44	4114	44	-4114	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGTACCAAAGAATAGAAA	NA	False	NA	37	True	NA	NA	NA	114393393	114340314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ES.36313.8	chr9	-	1418	1	ISM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	50789	5030	50789	-5030	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTAGTGTATTTGTG	NA	False	NA	NA	False	AGTAAA	-43	NA	114342648	114341230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_114341200_114342600
ES.36313.9	chr9	-	3967	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	77	5288	77	-5288	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGGCTTGAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	114393360	114341488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ES.36314.1	chr9	+	157	1	Intergenic	novelGene_29545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	8156	False	NA	NA	False	NA	NA	NA	114409664	114409821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114409700_114409800
ES.36315.1	chr9	+	530	2	Antisense	novelGene_ENSMUSG00000056167.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGCTGTGGTCATGGT	1997	False	NA	NA	False	NA	NA	NA	114413010	114415476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114413348_114415283
ES.36315.2	chr9	+	1672	2	Antisense	novelGene_ENSMUSG00000056167.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCCACTTGCCTCTCC	2050	False	NA	NA	False	AATAAA	-25	NA	114413063	114415579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114413348_114414191
ES.36316.1	chr9	+	4978	1	Antisense	novelGene_ENSMUSG00000056167.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGAGAAGACGGTTCTG	NA	False	NA	NA	False	NA	NA	NA	114460352	114465330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114460400_114465300
ES.36316.2	chr9	+	3601	2	Antisense	novelGene_ENSMUSG00000056167.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGAGAAGACGGTTCT	NA	False	NA	NA	False	NA	NA	NA	114461529	114465329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114464860_114465058
ES.36316.3	chr9	+	3335	2	Antisense	novelGene_ENSMUSG00000056167.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114461627	114465297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114462234_114462568
ES.36316.4	chr9	+	159	1	Intergenic	novelGene_29546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATATATTAA	NA	False	NA	NA	False	NA	NA	NA	114464866	114465025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114464900_114465000
ES.36317.1	chr9	-	2745	21	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	8	11789	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	151.27665880763	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGGAGGGAGGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	114469240	114403156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114403183_114415177_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.10	chr9	-	8679	17	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	28	-129	intron_retention	FALSE	canonical	3	27	junction_2	125.274199259065	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTGTGTTGTTT	NA	False	NA	-6	True	TATAAA	-24	NA	114469220	114415162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.11	chr9	-	7466	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	2	-129	intron_retention	FALSE	canonical	3	134	junction_3	100.44720074949	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTGTGTTGTTT	NA	False	NA	-6	True	TATAAA	-24	NA	114469132	114415162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114426675_114426862_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.12	chr9	-	2741	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-33	-131	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGGTTTGTGTTGT	NA	False	NA	-8	True	TATAAA	-22	NA	114469285	114415164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.16	chr9	-	2753	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-121	221	-11	-133	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469263	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.17	chr9	-	3577	17	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	14	-133	intron_retention	FALSE	canonical	1	4	junction_2	130.145576543154	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469101	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.18	chr9	-	2654	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	19	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.658696298733	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469229	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420609_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.19	chr9	-	2675	21	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	2	-133	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	194.294853251444	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469132	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420750_114422504_114422581_114425672_114425740_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.2	chr9	-	4577	1	Genic_Genomic	ENSMUSG00000056167.9	novel	NA	NA	NA	NA	50016	507	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATGTGAGATTGAAG	NA	False	NA	NA	False	NA	NA	NA	114419015	114414438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_114414400_114419000
ES.36317.20	chr9	-	3685	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-2	-133	intron_retention	FALSE	canonical	3	27	junction_4	161.900896467587	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469254	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114426675_114426862_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.22	chr9	-	2956	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-29	-133	intron_retention	FALSE	canonical	3	122	junction_4	115.591714428174	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469281	114415166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.24	chr9	-	7786	17	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-17	-134	intron_retention	FALSE	canonical	3	299	junction_5	62.0488718672628	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGGTTTGTGT	NA	False	NA	-11	True	TATAAA	-19	NA	114469269	114415167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.26	chr9	-	3812	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-10	-135	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469262	114415168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.27	chr9	-	2557	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-38	-135	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	133.407329524784	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469204	114415168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420738_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.28	chr9	-	2731	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-17	-135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	155.196935029849	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469269	114415168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452005_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.3	chr9	-	3932	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	18	6	intron_retention	FALSE	canonical	2	5	junction_2	179.879426351908	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCATGGTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	114469097	114414939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420750_114422504_114422581_114425672_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.30	chr9	-	3528	17	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	2	-135	intron_retention	FALSE	canonical	3	19	junction_15	126.65004688116	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469140	114415168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114461744_114461840_114468986
ES.36317.31	chr9	-	2084	16	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	32	-135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	169.727546379484	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469216	114415168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114446982_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114461744_114461840_114468986
ES.36317.33	chr9	-	3961	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-9	-136	intron_retention	FALSE	canonical	0	0	junction_5	159.635696370065	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469261	114415169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114433421_114433573_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.35	chr9	-	2348	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-31	-136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	158.560522975824	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469283	114415169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114446982_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.37	chr9	-	3720	17	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-9	-136	intron_retention	FALSE	canonical	0	0	junction_2	144.222701056387	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469261	114415169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420750_114426546_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.38	chr9	-	3700	17	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-17	-136	intron_retention	FALSE	canonical	0	0	junction_10	130.770657426466	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469269	114415169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.39	chr9	-	2549	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-9	-137	combination_of_known_splicesites	FALSE	canonical	3	19	junction_16	129.687860559385	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469261	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114461744_114461840_114468986
ES.36317.4	chr9	-	4104	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	2	2	intron_retention	FALSE	canonical	1	1	junction_11	180.264389162141	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATGTTGCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	114469246	114414943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448457_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.40	chr9	-	3750	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	7	-137	intron_retention	FALSE	canonical	0	0	junction_14	126.831032191036	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469241	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456565_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.41	chr9	-	2863	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-29	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	153.163085460964	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469281	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468890
ES.36317.42	chr9	-	2651	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-3	-137	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	160.834458346742	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469137	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.43	chr9	-	6661	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	39	-137	intron_retention	FALSE	canonical	3	122	junction_4	123.97575430027	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469209	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.45	chr9	-	2691	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	3	-137	intron_retention	FALSE	canonical	0	0	junction_8	145.769714579474	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469139	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.46	chr9	-	2848	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	8	-137	intron_retention	FALSE	canonical	3	27	junction_4	162.998699925138	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469107	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.47	chr9	-	3895	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-28	-137	intron_retention	FALSE	canonical	3	27	junction_4	152.245953138051	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469280	114415170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.5	chr9	-	2490	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	158.560522975824	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATGTTGCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	114469199	114414943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114446982_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.50	chr9	-	3733	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	-138	intron_retention	FALSE	canonical	1	2	junction_10	139.574538878386	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469251	114415171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448379_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.51	chr9	-	2586	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	-7	-138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	131.518756802988	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469259	114415171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.52	chr9	-	2728	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	156.271374161333	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTGTTGTTGGTTT	NA	False	NA	-15	True	TATAAA	-15	NA	114469249	114415171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426667_114426858_114426899_114427774_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.56	chr9	-	5138	19	ISM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	84	2807	-27	-2719	5prime_fragment	FALSE	canonical	3	122	junction_4	119.866244901001	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTGTGGTGCTGGTT	NA	False	NA	NA	False	TATAAA	-14	NA	114469058	114417752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.57	chr9	-	5129	1	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	41741	-1578	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	448	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGACTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	114427290	114422161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114422200_114427300
ES.36317.58	chr9	-	3492	16	NNC	ENSMUSG00000056167.9	novel	4866	15	NA	NA	16	-1043	intron_retention	FALSE	canonical	2	4	junction_1	130.520428371279	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTTGGTCATAGTG	NA	False	NA	NA	False	NA	NA	NA	114469232	114425947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114426150_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.59	chr9	-	2330	17	NNC	ENSMUSG00000056167.9	novel	4866	15	NA	NA	-2	-1043	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	133.097943259842	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTTGGTCATAGTG	NA	False	NA	NA	False	NA	NA	NA	114469168	114425947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114426150_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.6	chr9	-	2925	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATGTTGCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	114469248	114414943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.60	chr9	-	3448	16	NNC	ENSMUSG00000056167.9	novel	4866	15	NA	NA	1	-1044	intron_retention	FALSE	canonical	1	2	junction_8	169.796531832138	475	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGATTTGGTCATAGT	NA	False	NA	NA	False	NA	NA	NA	114469251	114425948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114426150_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448379_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.61	chr9	-	3329	15	FSM	ENSMUSG00000056167.9	ENSMUST00000217296.2	4866	15	21	1516	-3	-1516	multi-exon	FALSE	canonical	3	299	junction_3	61.1176934199876	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTTAAAATATTCTTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	114469145	114426420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.62	chr9	-	5491	12	NNC	ENSMUSG00000056167.9	novel	1723	10	NA	NA	1	6551	intron_retention	FALSE	non_canonical	0	0	junction_1	143.275842144266	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAGAAGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	114469251	114440044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114440570_114440670_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.63	chr9	-	1701	10	FSM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	22	0	18	0	multi-exon	FALSE	canonical	3	407	junction_3	40.9103204703612	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGAATCTAAGACCTCA	NA	False	NA	NA	False	NA	NA	NA	114469230	114446595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.64	chr9	-	4445	3	ISM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	12003	2859	11782	-2859	intron_retention	FALSE	canonical	3	407	junction_1	58.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	4483	False	NA	NA	False	NA	NA	NA	114457249	114449454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_114452031_114454887_114454972_114455464
ES.36317.65	chr9	-	6293	7	FSM	ENSMUSG00000056167.9	ENSMUST00000213539.2	1441	7	29	-4881	-9	-2859	multi-exon	FALSE	canonical	3	475	junction_4	26.6817665582072	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	114469124	114449454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.66	chr9	-	1488	9	NNC	ENSMUSG00000056167.9	novel	1441	7	NA	NA	19	-3507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.634088120525	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAAAAAAAGAAATTG	NA	False	NA	NA	False	AAAACA	-13	NA	114469229	114450102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114450508_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.67	chr9	-	1551	7	FSM	ENSMUSG00000056167.9	ENSMUST00000213539.2	1441	7	-110	0	-11	0	multi-exon	FALSE	canonical	3	475	junction_4	26.6817665582072	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGCAGTTTACTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	114469263	114454335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.7	chr9	-	4026	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATGTTGCATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	114469251	114414943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ES.36317.9	chr9	-	2686	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	20	-129	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	127.993405019146	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGGTTTGTGTTGTTT	NA	False	NA	-6	True	TATAAA	-24	NA	114469095	114415162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468853
ES.36318.1	chr9	-	178	1	Intergenic	novelGene_29547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	114471341	114471163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114471200_114471300
ES.36319.1	chr9	+	178	1	Intergenic	novelGene_29548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	114475049	114475227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114475000_114475200
ES.36319.2	chr9	+	173	2	Antisense	novelGene_ENSMUSG00000111744.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	114475050	114514993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114475195_114514964
ES.36319.3	chr9	+	176	2	Antisense	novelGene_ENSMUSG00000111744.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	114475051	114477665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_114475070_114477507
ES.36319.4	chr9	+	176	1	Intergenic	novelGene_29549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAAAGGTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	114485027	114485203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114485000_114485200
ES.36319.5	chr9	+	169	1	Intergenic	novelGene_29552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	114503175	114503344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114503200_114503300
ES.36319.6	chr9	+	159	1	Intergenic	novelGene_29553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAACTTTA	NA	False	NA	NA	False	NA	NA	NA	114513907	114514066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114513900_114514100
ES.3632.1	chr10	+	6333	1	Intergenic	novelGene_2773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTACTGGCTCACACT	NA	False	NA	NA	False	NA	NA	NA	95108633	95114966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95108600_95115000
ES.36320.1	chr9	+	4143	3	NNC	ENSMUSG00000032435.10	novel	1930	3	NA	NA	-113	-10633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	213.5	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	2013	False	NA	NA	False	NA	NA	NA	114517744	114525106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114518096_114518276_114521100_114524137
ES.36320.10	chr9	+	2553	13	NNC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	126.013529917316	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGTCAAATAACGTG	2135	False	NA	3	True	AATAAA	-16	NA	114517866	114553370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550887_114552320
ES.36320.11	chr9	+	3613	1	Intergenic	novelGene_29555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAATGAACAAACAAAAC	5799	False	NA	NA	False	NA	NA	NA	114521530	114525143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114521500_114525100
ES.36320.12	chr9	+	3683	10	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	16265	0	16265	0	intron_retention	FALSE	canonical	3	336	junction_6	49.5602887624984	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGTCAAATAACGTG	NA	False	NA	3	True	AATAAA	-16	NA	114534122	114553370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772
ES.36320.2	chr9	+	2679	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-64	-14	-64	14	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTTGCCTTTTCTTAT	2062	False	NA	17	True	AATAAA	-30	NA	114517793	114553384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ES.36320.3	chr9	+	3031	12	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	-47	13	intron_retention	FALSE	canonical	3	336	junction_7	45.7152523510552	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTTGCCTTTTCTTA	2079	False	NA	16	True	AATAAA	-29	NA	114517810	114553383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ES.36320.5	chr9	+	1748	8	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	-16	8031	-16	-8031	5prime_fragment	FALSE	canonical	3	363	junction_4	37.1631812526367	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGAGTATTTATGTGT	2110	False	NA	NA	False	GATAAA	-25	NA	114517841	114545339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667
ES.36320.6	chr9	+	3466	12	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	-16	13	intron_retention	FALSE	canonical	3	336	junction_7	47.2314505108129	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTTGCCTTTTCTTA	2110	False	NA	16	True	AATAAA	-29	NA	114517841	114553383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114518096_114518276_114518351_114534121_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ES.36320.7	chr9	+	2569	12	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	0	13	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	128.648537811324	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTTGCCTTTTCTTA	2126	False	NA	16	True	AATAAA	-29	NA	114517857	114553383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114549616_114549738_114550772_114550926_114552320
ES.36320.8	chr9	+	5126	11	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	5	9	intron_retention	FALSE	canonical	3	363	junction_4	36.5808693171718	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATAACGTGTTGCCTTTT	2131	False	NA	12	True	AATAAA	-25	NA	114517862	114553379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ES.36321.1	chr9	+	3460	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	-63	-14	-6	14	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGTTCATTAATTACA	NA	False	NA	33	True	AATAAA	-29	NA	114560177	114578426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ES.36321.10	chr9	+	3418	5	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.774733259633	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGTGCCTTCACAGT	NA	False	NA	18	True	AATAAA	-14	NA	114560281	114578411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114561568_114561646_114566250_114566428_114569126_114569226_114575506
ES.36321.11	chr9	+	3275	5	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	53	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	268.697785625412	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTTCACAGTTGTT	NA	False	NA	22	True	AATAAA	-18	NA	114560293	114578415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506_114577643_114577700
ES.36321.12	chr9	+	3321	4	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.29884186764	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560293	114578412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114566259_114566428_114569126_114569226_114575506
ES.36321.13	chr9	+	6008	1	NIC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	12163	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTGTGCCTTCACAGT	NA	False	NA	18	True	AATAAA	-14	NA	114572403	114578411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114572400_114578400
ES.36321.2	chr9	+	3279	4	NIC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	287.356147586154	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560185	114578412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114560283_114566250_114566428_114569126_114569226_114575506
ES.36321.3	chr9	+	3473	5	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	313.579734676844	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGCCTTCACAGTTG	NA	False	NA	20	True	AATAAA	-16	NA	114560217	114578413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114566250_114566428_114569126_114569226_114571999_114572066_114575506
ES.36321.4	chr9	+	5899	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	-8	-2508	-8	2508	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTATTTGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	114560232	114580920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ES.36321.5	chr9	+	3299	5	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	268.697785625412	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGCCTTCACAGTTG	NA	False	NA	20	True	AATAAA	-16	NA	114560253	114578413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506_114577381_114577452
ES.36321.7	chr9	+	3188	3	NIC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	21	3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	298.5	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTTCACAGTTGTT	NA	False	NA	22	True	AATAAA	-18	NA	114560261	114578415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114560442_114569126_114569226_114575506
ES.36321.8	chr9	+	3419	5	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	313.579734676844	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTGCCTTCACAG	NA	False	NA	17	True	AATAAA	-13	NA	114560261	114578410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114566250_114566428_114569126_114569226_114570395_114570455_114575506
ES.36321.9	chr9	+	3098	4	NNC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	283.573623597118	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560276	114578412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114560442_114569126_114569226_114575506_114577381_114577452
ES.36322.1	chr9	-	2129	4	Genic_Genomic	ENSMUSG00000111744.2	novel	406	1	NA	NA	-12217	184	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTTAAAATATTGTAT	8024	False	NA	NA	False	NA	NA	NA	114489320	114476513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_114477162_114480198_114480386_114484345_114484431_114488111
ES.36323.1	chr9	-	306	1	Intergenic	novelGene_29550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTCCAGGCCATCCA	773	False	NA	NA	False	NA	NA	NA	114500460	114500154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114500200_114500500
ES.36323.10	chr9	-	171	1	Intergenic	novelGene_29559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACAAATGCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	114570916	114570745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114570700_114570900
ES.36323.11	chr9	-	174	1	Intergenic	novelGene_29560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	114573949	114573775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114573800_114573900
ES.36323.2	chr9	-	167	1	Intergenic	novelGene_29551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCGTATGTCTCT	771	False	NA	NA	False	NA	NA	NA	114500462	114500295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114500300_114500500
ES.36323.3	chr9	-	150	2	Antisense	novelGene_ENSMUSG00000032434.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAGATATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	114573947	114500311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114500434_114573919
ES.36323.4	chr9	-	151	2	Antisense	novelGene_ENSMUSG00000032435.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAGATATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	114528145	114500311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114500416_114528098
ES.36323.5	chr9	-	1113	1	Intergenic	novelGene_29554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAGAGAAAGGGGAGACA	576	False	NA	NA	False	NA	NA	NA	114520041	114518928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114518900_114520000
ES.36323.6	chr9	-	172	1	Intergenic	novelGene_29556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATCTCTAATTCA	NA	False	NA	NA	False	NA	NA	NA	114528142	114527970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114528000_114528100
ES.36323.7	chr9	-	3119	2	Antisense	novelGene_ENSMUSG00000032435.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGCTGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	114533727	114529238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_114531774_114533143
ES.36323.8	chr9	-	4489	1	Intergenic	novelGene_29557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGAGGCTGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	114533727	114529238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114529200_114533700
ES.36323.9	chr9	-	184	1	Intergenic	novelGene_29558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAAGAGAATG	NA	False	NA	NA	False	NA	NA	NA	114533171	114532987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114533000_114533200
ES.36324.1	chr9	+	1135	3	NNC	ENSMUSG00000052724.8	novel	965	3	NA	NA	-907	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTTTCTTTCTTATT	NA	False	NA	NA	False	AATAAA	-45	NA	114608260	114611336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114608595_114609158_114609380_114610756
ES.36324.2	chr9	+	816	3	NNC	ENSMUSG00000052724.8	novel	965	3	NA	NA	816	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCCACCATTCTGCTT	NA	False	NA	NA	False	AATAAA	-34	NA	114609983	114611325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114610047_114610365_114610550_114610756
ES.36324.3	chr9	+	1259	1	NIC	ENSMUSG00000052724.8	novel	965	3	NA	NA	899	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCCACCATTCTGCTT	NA	False	NA	NA	False	AATAAA	-34	NA	114610066	114611325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114610100_114611300
ES.36325.1	chr9	-	1162	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	-160	-9	-153	9	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCATGAGATGTCTCTAA	NA	False	NA	-5	True	AATAAA	-25	NA	114611077	114585894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ES.36325.10	chr9	-	2447	3	NNC	ENSMUSG00000032436.18	novel	665	2	NA	NA	0	2074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGACGCTCTGTGTTCCC	NA	False	NA	NA	False	ATTAAA	-18	NA	114610910	114597714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114598284_114598575_114600279_114610735
ES.36325.11	chr9	-	669	2	FSM	ENSMUSG00000032436.18	ENSMUST00000216760.2	665	2	-29	25	-15	-25	multi-exon	FALSE	canonical	3	16	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114610939	114599813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114600279_114610735
ES.36325.12	chr9	-	776	2	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	-137	-10263	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	0	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACCTTTTCTGTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	114611061	114610051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114610502_114610735
ES.36325.2	chr9	-	4165	4	NIC	ENSMUSG00000032436.18	novel	993	5	NA	NA	-142	3	intron_retention	FALSE	canonical	3	1122	junction_1	141.662352875498	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTATTGCATGAGATGT	NA	False	NA	-11	True	AATAAA	-19	NA	114611066	114585900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114586360_114587872_114591074_114592286_114592461_114610735
ES.36325.3	chr9	-	1092	6	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	-168	2	at_least_one_novel_splicesite	TRUE	canonical	3	44	junction_1	525.219192337828	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTATTGCATGAGATG	NA	False	NA	-12	True	AATAAA	-18	NA	114611092	114585901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114586099_114586176_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ES.36325.4	chr9	-	5365	3	NIC	ENSMUSG00000032436.18	novel	874	4	NA	NA	-135	0	intron_retention	FALSE	canonical	3	1122	junction_1	161	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTCCTTATTGCATG	NA	False	NA	-17	True	AATAAA	-13	NA	114611059	114585906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114586360_114587872_114592461_114610735
ES.36325.5	chr9	-	1032	4	FSM	ENSMUSG00000032436.18	ENSMUST00000084867.9	874	4	-159	1	-135	-1	multi-exon	FALSE	canonical	3	20	junction_2	609.72343457232	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTTCCTTATTGCAT	NA	False	NA	-18	True	AATAAA	-12	NA	114611059	114585907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114586360_114587872_114587955_114592286_114592461_114610735
ES.36325.6	chr9	-	988	5	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	572.985820068874	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTTCCTTATTGCAT	NA	False	NA	-18	True	AATAAA	-12	NA	114610910	114585907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114586360_114587872_114587955_114590974_114591074_114592280_114592461_114610735
ES.36325.7	chr9	-	962	5	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	605.54329944274	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTTCCTTATTGCAT	NA	False	NA	-18	True	AATAAA	-12	NA	114610924	114585907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114586326_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ES.36325.8	chr9	-	1363	1	NIC	ENSMUSG00000032436.18	novel	993	5	NA	NA	17247	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGTTTCCTTATTGC	NA	False	NA	-20	True	AATAAA	-10	NA	114587272	114585909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114585900_114587300
ES.36325.9	chr9	-	5184	3	NNC	ENSMUSG00000032436.18	novel	874	4	NA	NA	-1977	-4	intron_retention	FALSE	canonical	0	0	junction_2	561	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCAGGTTTCCTTATTG	NA	False	NA	-21	True	AATAAA	-9	NA	114612901	114585910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114586360_114587872_114592461_114612754
ES.36326.1	chr9	+	822	1	Intergenic	novelGene_29561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114630954	114631776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114631000_114631800
ES.36327.1	chr9	-	172	1	Intergenic	novelGene_29562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	114699294	114699122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114699100_114699300
ES.36328.1	chr9	-	4401	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	-7	-3	-7	3	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTGTTGTATTTTATA	NA	False	NA	NA	False	NA	NA	NA	114763062	114728405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.11	chr9	-	3650	8	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	45	-435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.1773750277355	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGAGCCTATTTTTC	NA	False	NA	-8	True	AATAAA	-19	NA	114762902	114728843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749760_114762883
ES.36328.12	chr9	-	2830	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	13	-435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.4374517001257	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGGAGCCTATTTTTC	NA	False	NA	-8	True	AATAAA	-19	NA	114762934	114728843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730436_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.13	chr9	-	2067	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	-13	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.4374517001257	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTCCAAGAAGACTT	NA	False	NA	NA	False	AATAAA	-18	NA	114762960	114729632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730442_114731446_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.14	chr9	-	2061	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	4	-128	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGTCCAAGAAGACT	NA	False	NA	NA	False	AATAAA	-17	NA	114762943	114729633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.15	chr9	-	3003	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	163	1225	55	-128	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGTCCAAGAAGACT	NA	False	NA	NA	False	AATAAA	-17	NA	114762892	114729633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.2	chr9	-	3307	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTGTTGTATTTTATA	NA	False	NA	NA	False	NA	NA	NA	114762961	114728405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.3	chr9	-	3291	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.4374517001257	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTGATTGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	114762949	114728410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730438_114731429_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.4	chr9	-	4182	8	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	288	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	42.155688119355	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATAACTTGATTGTTG	NA	False	NA	NA	False	NA	NA	NA	114762659	114728414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762545
ES.36328.5	chr9	-	3956	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	13	422	13	-422	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTTTCTTGTTTTT	NA	False	NA	5	True	AATAAA	-32	NA	114763042	114728830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.6	chr9	-	2959	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	16	-423	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTCCTTTCTTGTTTT	NA	False	NA	4	True	AATAAA	-31	NA	114763039	114728831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.7	chr9	-	3752	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	13	-434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	40.4374517001257	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762934	114728842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114731571_114732728_114732836_114733842_114733936_114734019_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36328.8	chr9	-	3768	8	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	274	-434	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	42.155688119355	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762673	114728842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762545
ES.36328.9	chr9	-	3580	7	NIC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	35	-434	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	45.3422172667666	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762912	114728842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_114731571_114732728_114732836_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ES.36329.1	chr9	-	177	1	Intergenic	novelGene_29563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114804358	114804181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114804200_114804400
ES.3633.1	chr10	+	1947	1	Intergenic	novelGene_2776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTACATTATGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	95139869	95141816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95139900_95141800
ES.36330.1	chr9	-	176	1	Intergenic	novelGene_29564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	114804564	114804388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114804400_114804600
ES.36331.1	chr9	+	3194	12	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	-486	1051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4607078977156	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTTGTGTTATTTTT	NA	False	NA	NA	False	ATTAAA	-6	NA	114807150	115062344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114807211_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.10	chr9	+	2268	13	NNC	ENSMUSG00000040875.13	novel	2158	12	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9374246986859	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	NA	False	NA	4	True	ATTAAA	-14	NA	114819837	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114819891_114836506_114836643_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.11	chr9	+	3314	13	NNC	ENSMUSG00000040875.13	novel	2158	12	NA	NA	23	1043	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.9374246986859	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	AATATA	-9	NA	114819838	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114819891_114836506_114836643_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.12	chr9	+	216	1	Intergenic	novelGene_29566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCTCTTGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	114825349	114825565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114825300_114825600
ES.36331.13	chr9	+	3439	12	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	17494	1047	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.218657001768	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTGTCTTGTGTTAT	NA	False	NA	NA	False	ATTAAA	-2	NA	114863224	115062340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114863534_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.14	chr9	+	3232	12	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	17629	1047	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	20.4995464573897	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTGTCTTGTGTTAT	NA	False	NA	NA	False	ATTAAA	-2	NA	114863359	115062340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114863462_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.15	chr9	+	3075	11	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	17665	1046	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.54976459406	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGTGTCTTGTGTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	114863395	115062339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114863534_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.16	chr9	+	1990	11	NNC	ENSMUSG00000040875.13	novel	1872	10	NA	NA	-13568	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7507009253963	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	NA	False	NA	4	True	ATTAAA	-14	NA	114869840	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114869944_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.17	chr9	+	193	1	Intergenic	novelGene_29567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	114886555	114886748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_114886600_114886700
ES.36331.18	chr9	+	2936	10	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-331	1043	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.438387843266	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	AATATA	-9	NA	114917577	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114917644_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.19	chr9	+	2850	9	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-2378	1043	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.4386988196999	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	AATATA	-9	NA	114947228	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114947401_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.2	chr9	+	3961	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-433	-1051	-433	1049	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTCTTGTGTTATTT	NA	False	NA	NA	False	ATTAAA	-4	NA	114807203	115062342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.20	chr9	+	2520	8	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	49314	1042	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	33.6640060914094	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGTGTCTTGT	NA	False	NA	NA	False	AATATA	-8	NA	114998920	115062335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114998979_115004995_115005151_115036585_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.21	chr9	+	2609	8	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	49350	1043	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	21.4466590329	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	-11	True	NA	NA	False	AATATA	-9	NA	114998956	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114999099_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.22	chr9	+	3261	8	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	49454	1049	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.4382221761739	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTCTTGTGTTATTT	93	False	NA	NA	False	ATTAAA	-4	NA	114999060	115062342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114999849_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.23	chr9	+	3217	1	Intergenic	novelGene_29568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTTTAGAGCAATCAC	7239	False	NA	NA	False	NA	NA	NA	115006206	115009423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_115006200_115009400
ES.36331.24	chr9	+	2304	6	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	95790	1043	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.8843002187195	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	5865	False	NA	NA	False	AATATA	-9	NA	115045396	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_115045465_115045542_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.25	chr9	+	4299	4	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	149235	-1049	95975	1047	intron_retention	FALSE	canonical	3	73	junction_2	2.16024689946929	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTGTCTTGTGTTAT	6050	False	NA	NA	False	ATTAAA	-2	NA	115045581	115062340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_115046098_115052660_115052848_115055748_115055932_115058927
ES.36331.26	chr9	+	1129	5	ISM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	149256	2	95996	2	3prime_fragment	FALSE	canonical	3	73	junction_2	2.54950975679639	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	6071	False	NA	4	True	ATTAAA	-14	NA	115045602	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.27	chr9	+	4396	5	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	99247	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.2903890034346	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	9322	False	NA	4	True	ATTAAA	-14	NA	115048853	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_115052582_115052626_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.28	chr9	+	4428	5	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	100265	1046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.2903890034346	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTGTGTCTTGTGTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	115049871	115062339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_115052582_115052626_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.3	chr9	+	2348	12	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-412	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6607087008157	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	NA	False	NA	4	True	ATTAAA	-14	NA	114807224	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_114807245_114807591_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.4	chr9	+	2885	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-408	0	-408	0	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCGTTGGTATTTGTTG	NA	False	NA	6	True	ATTAAA	-16	NA	114807228	115061291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.5	chr9	+	3482	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-146	1049	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTCTTGTGTTATTT	NA	False	NA	NA	False	ATTAAA	-4	NA	114807490	115062342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.6	chr9	+	2428	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-145	2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTGGTATTTGT	NA	False	NA	4	True	ATTAAA	-14	NA	114807491	115061289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.7	chr9	+	3559	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	-138	-944	-138	942	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCTTCTCTGTAGTA	NA	False	NA	NA	False	TATAAA	-11	NA	114807498	115062235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.8	chr9	+	3498	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-124	1045	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	24.2505670036806	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTCTTGTGTCTTGTGTT	NA	False	NA	NA	False	AATATA	-11	NA	114807512	115062338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36331.9	chr9	+	3182	12	FSM	ENSMUSG00000040875.13	ENSMUST00000182384.8	2158	12	19	-1043	19	1043	multi-exon	FALSE	canonical	1	3	junction_1	20.7380354832004	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	AATATA	-9	NA	114819834	115062336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_114819891_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ES.36332.1	chr9	-	271	1	Intergenic	novelGene_29565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCACTCATACACATAA	7663	False	NA	NA	False	NA	NA	NA	114811418	114811147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_114811100_114811400
ES.36333.1	chr9	-	375	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	614	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATCCCTTGGCCAGG	7273	False	NA	NA	False	NA	NA	NA	114811808	114811433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_114811400_114811800
ES.36334.1	chr9	-	1841	1	Intergenic	novelGene_29569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTCCTGGTGACCTACT	3258	False	NA	NA	False	NA	NA	NA	115031770	115029929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_115029900_115031800
ES.36335.1	chr9	+	176	1	Intergenic	novelGene_29570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAACAAAC	7030	False	NA	NA	False	NA	NA	NA	115095870	115096046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_115095900_115096000
ES.36336.1	chr9	+	6441	1	Intergenic	novelGene_29573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAACTGGCAA	NA	False	NA	NA	False	NA	NA	NA	115116106	115122547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_115116100_115122500
ES.36337.1	chr9	+	3473	1	Intergenic	novelGene_29574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGAGACACATTTTCT	NA	False	NA	NA	False	NA	NA	NA	115129913	115133386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_115129900_115133400
ES.36338.1	chr9	-	8244	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-54	-3969	-54	3969	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATCTGTTGTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	115139543	115067679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.10	chr9	-	4372	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	190.30775076176	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTGTCTCTTGCAGAC	NA	False	NA	-2	True	AATAAA	-19	NA	115139536	115071538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084006_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.11	chr9	-	3044	12	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	33585	110	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	273.495040521913	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTGTCTCTTGCAGAC	NA	False	NA	-2	True	AATAAA	-19	NA	115105904	115071538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083905_115085200_115085250_115095161_115095262_115096377_115096444_115105771
ES.36338.15	chr9	-	4277	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	195.906748433107	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCCTTGTCTCTTGCAGA	NA	False	NA	-3	True	AATAAA	-18	NA	115139535	115071539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.18	chr9	-	4130	14	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	202.44511273093	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115139535	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085251_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.19	chr9	-	3509	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	33576	108	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	253.22423917572	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115105913	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115088458_115088564_115095161_115095262_115096377_115096444_115105771
ES.36338.2	chr9	-	4846	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-510	-115	-510	115	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTTGCAGACCTTGT	NA	False	NA	3	True	AATAAA	-24	NA	115139999	115071533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.22	chr9	-	5022	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-44	108	intron_retention	FALSE	canonical	3	623	junction_9	55.793761994967	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115139533	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.23	chr9	-	3762	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	523	108	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	188.981903895585	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115138966	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087585_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.24	chr9	-	4160	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	18	108	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	251.045192921292	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115139471	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083905_115085200_115085250_115086503_115086651_115087529_115087585_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.25	chr9	-	3286	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	551	108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	188.997660185399	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGCCTTGTCTCTTGCAG	NA	False	NA	-4	True	AATAAA	-17	NA	115138938	115071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115072781_115075271_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.26	chr9	-	2861	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	473	106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.828959916774	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACGCCTTGTCTCTTGC	NA	False	NA	-6	True	AATAAA	-15	NA	115139016	115071542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115071780_115072772_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.27	chr9	-	2346	8	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	56504	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	266.417349438119	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATACCTTGTCATTT	NA	False	NA	-28	True	AATAAA	-27	NA	115082985	115071642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115071904_115071974_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900
ES.36338.28	chr9	-	4730	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-503	-6	-503	6	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATACCTTGTCATTT	NA	False	NA	-28	True	AATAAA	-27	NA	115139992	115071642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.29	chr9	-	4027	14	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	6	combination_of_known_splicesites	FALSE	canonical	3	66	junction_9	185.380848988232	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATACCTTGTCATTT	NA	False	NA	-28	True	AATAAA	-27	NA	115139535	115071642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.3	chr9	-	5633	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	111	intron_retention	FALSE	canonical	3	623	junction_9	56.4884402117019	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGTCTCTTGCAGACC	NA	False	NA	-1	True	AATAAA	-20	NA	115139536	115071537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.30	chr9	-	6665	14	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-511	0	intron_retention	FALSE	canonical	3	623	junction_8	57.0022318674438	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115140000	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.31	chr9	-	4228	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	189.940505305097	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139517	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087608_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.32	chr9	-	4111	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	196.076307511507	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139535	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083905_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.33	chr9	-	3897	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.828959916774	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139535	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115072168_115072537_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.34	chr9	-	5398	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-32	0	intron_retention	FALSE	canonical	1	4	junction_10	193.656715528762	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139521	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115085250_115086503_115086651_115087529_115087585_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.35	chr9	-	3508	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	249.471159405251	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139535	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115071961_115072680_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083130_115083912_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.37	chr9	-	7346	13	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	0	intron_retention	FALSE	canonical	3	623	junction_7	55.3885266900004	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139535	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.38	chr9	-	3576	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	20089	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	191.638618237557	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115119400	115071648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115119375
ES.36338.40	chr9	-	3786	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.828959916774	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGATTTCTGATACCTT	NA	False	NA	-35	True	AATAAA	-20	NA	115139535	115071649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115071943_115072422_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.41	chr9	-	4370	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	240.118842646199	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGATTTCTGATACC	NA	False	NA	-37	True	AATAAA	-18	NA	115139536	115071651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115088458_115088564_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.42	chr9	-	4438	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	249.134870288665	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGATTTCTGATACC	NA	False	NA	-37	True	AATAAA	-18	NA	115139535	115071651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115104061_115104236_115105771_115106060_115109478_115109588_115138819
ES.36338.45	chr9	-	4109	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	196.30106251077	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGATTTCTGATACC	NA	False	NA	-37	True	AATAAA	-18	NA	115139535	115071651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.46	chr9	-	4221	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	255.015938499712	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGGATTTCTGATAC	NA	False	NA	-38	True	AATAAA	-17	NA	115139512	115071652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115084287_115084424_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.47	chr9	-	4155	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	189.110714192037	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCTGGATTTCTGATA	NA	False	NA	-39	True	AATAAA	-16	NA	115139535	115071653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083905_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.49	chr9	-	4023	18	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-162198	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	242.580375864012	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	9183	False	NA	-60	True	NA	NA	NA	115301687	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819_115139176_115139232_115139272_115301584
ES.36338.5	chr9	-	6311	14	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	111	intron_retention	FALSE	canonical	3	623	junction_8	57.0022318674438	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGTCTCTTGCAGACC	NA	False	NA	-1	True	AATAAA	-20	NA	115139535	115071537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.50	chr9	-	4197	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-26	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	188.981903895585	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115139535	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087585_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.51	chr9	-	3766	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	315	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	194.37242025324	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115139174	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.52	chr9	-	4143	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	195.906748433107	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115139536	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.53	chr9	-	3344	8	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	54261	-26	intron_retention	FALSE	canonical	3	663	junction_5	55.401687147374	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115085228	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115081755_115082900_115083113_115083856_115084012_115085200
ES.36338.54	chr9	-	4985	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-26	intron_retention	FALSE	canonical	3	623	junction_9	56.3730287224923	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115139535	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.55	chr9	-	4042	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-43	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.508006315686	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAGTATA	NA	False	NA	-60	True	NA	NA	NA	115139532	115071674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080901_115082891_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.57	chr9	-	3966	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-47	302	-47	-302	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTTCCAGCTTATAGG	NA	False	NA	NA	False	TATAAA	-16	NA	115139536	115071950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.58	chr9	-	3308	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-48	-1066	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	240.118842646199	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGCGTACCTGTCAAC	NA	False	NA	NA	False	NA	NA	NA	115139537	115072714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115088458_115088564_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.59	chr9	-	3514	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	-510	1217	-510	-1217	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTCTGATGTGTAAC	NA	False	NA	-1	True	ATTAAA	-17	NA	115139999	115072865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.60	chr9	-	4983	14	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	-1218	intron_retention	FALSE	canonical	3	623	junction_8	57.0022318674438	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTGATGTGTAA	NA	False	NA	-2	True	ATTAAA	-16	NA	115139536	115072866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.61	chr9	-	2734	17	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-31	-1219	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	185.828959916774	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTCTGATGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	115139520	115072867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819_115138914_115139212
ES.36338.62	chr9	-	4227	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-1219	intron_retention	FALSE	canonical	0	0	junction_8	197.876804077276	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTCTGATGTGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	115139535	115072867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115085973_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.64	chr9	-	2370	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	29968	-1220	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	246.932559394036	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTTTCTGATGTGT	NA	False	NA	-4	True	ATTAAA	-14	NA	115109521	115072868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115088458_115088564_115095161_115095262_115096377_115096444_115105771_115106060_115109478
ES.36338.65	chr9	-	2892	15	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-1220	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	196.30106251077	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCTGTTTCTGATGTGT	NA	False	NA	-4	True	ATTAAA	-14	NA	115139535	115072868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.66	chr9	-	6116	13	NIC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-37	-1221	intron_retention	FALSE	canonical	3	623	junction_7	55.3885266900004	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCTGTTTCTGATGTG	NA	False	NA	-5	True	ATTAAA	-13	NA	115139526	115072869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.67	chr9	-	2935	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-46	-1222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	190.30775076176	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGCTGTTTCTGATGT	NA	False	NA	-6	True	ATTAAA	-12	NA	115139535	115072870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083902_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.68	chr9	-	1553	4	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-47	-32646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	351.941598690591	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTACACTTAATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	115139536	115104294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115104481_115105518_115106060_115109478_115109588_115138819
ES.36338.69	chr9	-	183	1	Intergenic	novelGene_29571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	115106596	115106413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_115106400_115106600
ES.36338.7	chr9	-	4219	15	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	-44	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	196.076307511507	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTGTCTCTTGCAGAC	NA	False	NA	-2	True	AATAAA	-19	NA	115139533	115071538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115083905_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ES.36338.70	chr9	-	3551	1	Intergenic	novelGene_29572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	706	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATTTAGGTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	115117019	115113468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_115113500_115117000
ES.36338.9	chr9	-	3661	16	NNC	ENSMUSG00000032437.11	novel	4221	16	NA	NA	19603	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	298.613864380072	843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTTGTCTCTTGCAGAC	NA	False	NA	-2	True	AATAAA	-19	NA	115119886	115071538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081751_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087585_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115119838
ES.36339.1	chr9	+	154	1	Intergenic	novelGene_29575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	115636533	115636687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_115636500_115636700
ES.3634.1	chr10	-	1693	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	-30	-2	-5	2	multi-exon	FALSE	canonical	3	29	junction_2	28.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGCGTGTCCATTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95160000	95010605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95011841_95158447_95158752_95159846
ES.3634.10	chr10	-	5555	1	Intergenic	novelGene_2774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	95129962	95124407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95124400_95130000
ES.3634.11	chr10	-	5379	1	Intergenic	novelGene_2775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGTGAGAGAAGGGTGA	NA	False	NA	NA	False	NA	NA	NA	95132046	95126667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95126700_95132000
ES.3634.12	chr10	-	2750	1	FSM	ENSMUSG00000112744.2	ENSMUST00000219461.2	1984	1	1951	-2717	1951	2717	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAGTCTTTACAGAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	95148764	95146014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95146000_95148800
ES.3634.13	chr10	-	2021	1	FSM	ENSMUSG00000112744.2	ENSMUST00000219461.2	1984	1	1932	-1969	1932	1969	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAACTGTTCTAGGGT	NA	False	NA	NA	False	NA	NA	NA	95148783	95146762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95146800_95148800
ES.3634.14	chr10	-	2750	1	Genic_Genomic	ENSMUSG00000045867.11	novel	NA	NA	NA	NA	-37	327	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATACTACCAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	95160032	95157282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_95157300_95160000
ES.3634.15	chr10	-	2090	2	ISM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-524	146156	19	327	5prime_fragment	FALSE	canonical	3	30	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATACTACCAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	95159951	95157282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95158752_95159330
ES.3634.16	chr10	-	967	3	NIC	ENSMUSG00000045867.11	novel	717	3	NA	NA	-9	327	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATACTACCAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	95160004	95157282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95157804_95158447_95158752_95159862
ES.3634.17	chr10	-	1598	2	ISM	ENSMUSG00000045867.11	ENSMUST00000218761.2	2663	3	-137	110898	-5	302	5prime_fragment	FALSE	canonical	3	29	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	95160000	95157307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95158752_95159846
ES.3634.2	chr10	-	2210	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	-574	-521	-6	2	multi-exon	FALSE	canonical	3	30	junction_2	28	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGCGTGTCCATTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95160001	95010605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95011841_95158447_95158752_95159330
ES.3634.3	chr10	-	1631	3	NIC	ENSMUSG00000045867.11	novel	1661	3	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_2	34	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	95159956	95010607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95011841_95158447_95158752_95159862
ES.3634.4	chr10	-	780	2	NNC	ENSMUSG00000045867.11	novel	1613	2	NA	NA	134372	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGCCTCTTTCAATG	NA	False	NA	-2	True	AATAAA	-18	NA	95024455	95011130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95011841_95024385
ES.3634.5	chr10	-	1162	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	-25	524	0	-5	multi-exon	FALSE	canonical	3	29	junction_2	28.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGTGCCTCTTTCAAT	NA	False	NA	-3	True	AATAAA	-17	NA	95159995	95011131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95011841_95158447_95158752_95159846
ES.3634.6	chr10	-	3597	1	Genic_Genomic	ENSMUSG00000045867.11	novel	NA	NA	NA	NA	108836	15	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGTTGCATGAAAC	NA	False	NA	NA	False	NA	NA	NA	95049991	95046394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_95046400_95050000
ES.3634.7	chr10	-	4187	2	Intergenic	novelGene_2769	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAAACCCTGTCTCGAGA	NA	False	NA	NA	False	NA	NA	NA	95060083	95055507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95056793_95057181
ES.3634.8	chr10	-	180	1	Intergenic	novelGene_2770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95056393	95056213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95056200_95056400
ES.3634.9	chr10	-	3135	1	Intergenic	novelGene_2772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGGCCTGA	NA	False	NA	NA	False	NA	NA	NA	95087925	95084790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95084800_95087900
ES.36340.1	chr9	-	359	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	159	-46	159	46	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGACT	NA	False	NA	-17	True	AATAAA	-18	NA	115869973	115869614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115869600_115870000
ES.36341.1	chr9	-	4804	8	FSM	ENSMUSG00000032440.14	ENSMUST00000061101.12	8092	8	-111	3399	-16	1237	multi-exon	FALSE	canonical	1	1	junction_6	2.1189138534559	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTCTTGTTGCTGTC	NA	False	NA	NA	False	AATAAA	-41	NA	116004444	115916759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_115987338_115987414_116004011
ES.36341.2	chr9	-	4609	7	FSM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	102	-1235	7	1235	multi-exon	FALSE	canonical	1	1	junction_6	1.95078331845327	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCCTCTTGTTGCTG	NA	False	NA	NA	False	AATAAA	-39	NA	116004326	115916761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_116004011
ES.36341.3	chr9	-	2903	7	NNC	ENSMUSG00000032440.14	novel	3476	7	NA	NA	-11	-493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCCTCAGCCTCACTG	NA	False	NA	NA	False	TTTAAA	-19	NA	116004344	115918489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960608_115960782_116004011
ES.36342.1	chr9	-	188	1	Intergenic	novelGene_29576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTGCCCCGGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	116052376	116052188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_116052200_116052400
ES.36343.1	chr9	-	131	1	Intergenic	novelGene_29577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCTAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116195913	116195782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_116195800_116195900
ES.36344.1	chr9	-	176	1	Intergenic	novelGene_29578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTCTCTG	7040	False	NA	NA	False	NA	NA	NA	116377258	116377082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_116377100_116377300
ES.36345.1	chr9	-	172	1	Intergenic	novelGene_29579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	116519015	116518843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_116518800_116519000
ES.36346.1	chr9	+	2354	1	Intergenic	novelGene_29580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCATAAATATCATAATA	NA	False	NA	NA	False	AATAAA	-16	NA	116866250	116868604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_116866200_116868600
ES.36347.11	chr9	+	2118	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	60	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTATGCTATTGTTTCA	9620	False	NA	NA	False	AATAAA	-14	NA	117869601	117891617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.12	chr9	+	3223	9	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.7685202327344	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9620	False	NA	NA	False	ATTAAA	-23	NA	117869601	117892646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117889839_117889963_117890781
ES.36347.13	chr9	+	2017	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-23	-62	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.3308064707382	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAACATGTCTGC	9620	False	NA	NA	False	AATAAA	-17	NA	117869601	117891495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890517_117890586_117890781
ES.36347.14	chr9	+	2263	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	35	1098	-23	2	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAATGTCCAGTTAAAAG	9620	False	NA	1	True	AATAAA	-14	NA	117869601	117891809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.15	chr9	+	3058	9	NIC	ENSMUSG00000039285.13	novel	2156	8	NA	NA	-23	-268	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.0035614876162	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATTGGATGTGAA	9620	False	NA	NA	False	ATTAAA	-16	NA	117869601	117892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117869945_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.16	chr9	+	3941	8	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-22	268	intron_retention	FALSE	non_canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGTGGAAATTCATC	9621	False	NA	NA	False	AGTAAA	-16	NA	117869602	117892075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888887_117890011
ES.36347.17	chr9	+	5628	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-42	-3087	-20	-268	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATTGGATGTGAA	9623	False	NA	NA	False	ATTAAA	-16	NA	117869604	117892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ES.36347.18	chr9	+	1616	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-42	925	-20	-925	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAACTCTGACTCCTTT	9623	False	NA	NA	False	AATATA	-25	NA	117869604	117888627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ES.36347.19	chr9	+	2266	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-41	274	-19	-274	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCTCAGGAGTGTTT	9624	False	NA	NA	False	AAGAAA	-9	NA	117869605	117889278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ES.36347.2	chr9	+	3216	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-20	-247	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCCTTGCCTATGTAT	9565	False	NA	NA	False	ATTAAA	-37	NA	117869546	117892660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.20	chr9	+	4606	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	39	-1249	-19	1249	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAATATTTGTATTT	9624	False	NA	NA	False	AATAAA	-10	NA	117869605	117894156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.21	chr9	+	3526	10	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	74.5168801822699	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTATTTTGTGATT	9626	False	NA	2	True	AATATA	-16	NA	117869607	117892905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117889836_117889963_117890781
ES.36347.22	chr9	+	2993	7	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-17	-262	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	72.6536685622657	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGATGTGAAATACTG	9626	False	NA	NA	False	ATTAAA	-22	NA	117869607	117892645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.23	chr9	+	3395	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGCTGTATTTTGTGAT	9630	False	NA	1	True	AATATA	-15	NA	117869611	117892904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.24	chr9	+	4078	8	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.9923824600002	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTATTTTGTGATT	9631	False	NA	2	True	AATATA	-16	NA	117869612	117892905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117870757_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.25	chr9	+	2516	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-19	2	3	-2	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTCTGTGTTCTTTTTA	9646	False	NA	NA	False	AATAAA	-15	NA	117869627	117889550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ES.36347.26	chr9	+	3486	9	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	5	-261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1005836553784	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9648	False	NA	NA	False	ATTAAA	-23	NA	117869629	117892646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879290_117879973_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.27	chr9	+	1903	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	81	1412	1	-62	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAAACATGTCTGC	9666	False	NA	NA	False	AATAAA	-17	NA	117869647	117891495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.28	chr9	+	3121	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	2	-261	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	67.3308064707382	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9667	False	NA	NA	False	ATTAAA	-23	NA	117869648	117892646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890517_117890586_117890781
ES.36347.29	chr9	+	4386	8	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-14	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	71.8405263377837	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACAGCTGTATTTTGTG	9688	False	NA	-1	True	AATATA	-13	NA	117869669	117892902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.3	chr9	+	3462	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	-11	-55	-11	55	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGACAACCCCAACAAGC	9574	False	NA	59	True	ATTAAA	-31	NA	117869555	117892962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.30	chr9	+	2417	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	129	850	12	250	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATAACAAAGATGGC	9714	False	NA	NA	False	NA	NA	NA	117869695	117892057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.31	chr9	+	4054	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	31	-268	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.6859250487677	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATTGGATGTGAA	9804	False	NA	NA	False	ATTAAA	-16	NA	117869785	117892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.33	chr9	+	3953	9	NNC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-1903	-264	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	78.3354166389635	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATTGGATGTGAAATAC	4250	False	NA	NA	False	ATTAAA	-20	NA	117876479	117892643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117876702_117878377_117878504_117878964_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117889827_117889963_117890781
ES.36347.34	chr9	+	3504	4	NIC	ENSMUSG00000039285.13	novel	742	5	NA	NA	570	-124	intron_retention	FALSE	canonical	2	9	junction_3	63.4262476336799	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGCAATTTGA	8295	False	NA	NA	False	AGTAAA	-15	NA	117880524	117891683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117880571_117884883_117884979_117888124_117890586_117890781
ES.36347.35	chr9	+	4760	3	FSM	ENSMUSG00000039285.13	ENSMUST00000133814.2	599	3	-3332	-829	1285	-124	multi-exon	FALSE	canonical	0	0	junction_2	77.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGCAATTTGA	9010	False	NA	NA	False	AGTAAA	-15	NA	117881239	117891683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117884979_117888124_117888244_117890781
ES.36347.36	chr9	+	4299	2	Genic_Genomic	ENSMUSG00000039285.13	novel	3396	8	NA	NA	-1769	-268	multi-exon	FALSE	non_canonical	0	0	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATTGGATGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	117882802	117892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_117884475_117890012
ES.36347.37	chr9	+	1921	2	NNC	ENSMUSG00000039285.13	novel	2499	7	NA	NA	1216	272	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTGGAAATTCATCTAAA	NA	False	NA	NA	False	AGTAAA	-20	NA	117889339	117892079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_117889963_117890781
ES.36347.4	chr9	+	3128	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	7	261	7	-261	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATGTGAAATACTGT	9592	False	NA	NA	False	ATTAAA	-23	NA	117869573	117892646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.5	chr9	+	1255	5	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	-59	8762	21	63	5prime_fragment	FALSE	canonical	3	140	junction_4	16.3783393541592	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTATATTGGGTTGTG	9606	False	NA	NA	False	AATATA	-18	NA	117869587	117880790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421
ES.36347.6	chr9	+	2151	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	21	1224	21	-124	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGCAATTTGA	9606	False	NA	NA	False	AGTAAA	-15	NA	117869587	117891683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.7	chr9	+	3496	8	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	21	67	intron_retention	FALSE	canonical	0	0	junction_6	64.1102366941473	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTGTTTCAAGTTTTA	9606	False	NA	NA	False	AATAAA	-21	NA	117869587	117891624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
ES.36347.8	chr9	+	3952	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	21	-577	21	577	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTGAAGCTTGAAC	9606	False	NA	NA	False	AGTAAA	-16	NA	117869587	117893484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36347.9	chr9	+	4203	8	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	23	-268	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	71.8405263377837	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGAATTGGATGTGAA	9608	False	NA	NA	False	ATTAAA	-16	NA	117869589	117892639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117880163_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ES.36348.1	chr9	+	1910	1	Intergenic	novelGene_29581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAAGCTCTCCTCCGCA	NA	False	NA	NA	False	NA	NA	NA	117936133	117938043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_117936100_117938000
ES.36349.1	chr9	+	1323	1	Intergenic	novelGene_29582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	117964540	117965863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_117964500_117965900
ES.3635.1	chr10	+	137	1	Intergenic	novelGene_2777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95173527	95173664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95173500_95173700
ES.36350.1	chr9	+	4078	1	Intergenic	novelGene_29583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117973118	117977196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_117973100_117977200
ES.36351.1	chr9	-	1654	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	54	-539	40	539	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCTACTGTCGGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	117979191	117893050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ES.36351.2	chr9	-	1156	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	4	9	4	-9	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCAGGAAGGCA	NA	False	NA	NA	False	ATTAAA	-8	NA	117979241	117893598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ES.36351.3	chr9	-	1143	4	NNC	ENSMUSG00000039163.11	novel	1169	4	NA	NA	34745	-9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	89.5705804876182	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCAGGAAGGCA	NA	False	NA	NA	False	ATTAAA	-8	NA	117944486	117893598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_117894417_117897741_117897897_117904189_117904281_117944407
ES.36351.4	chr9	-	618	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	-15	566	-15	7	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTGATTTATTAAATAT	NA	False	NA	0	True	AATAAA	-20	NA	117979260	117894155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ES.36351.5	chr9	-	3062	1	NIC	ENSMUSG00000039163.11	novel	1169	4	NA	NA	82014	7	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTGATTTATTAAATAT	NA	False	NA	0	True	AATAAA	-20	NA	117897217	117894155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_117894200_117897200
ES.36351.6	chr9	-	504	3	ISM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	37	10401	23	-9828	5prime_fragment	FALSE	canonical	3	186	junction_2	4.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGGCTCTATGATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	117979208	117903990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_117904281_117944407_117944498_117979084
ES.36352.1	chr9	+	4103	2	Intergenic	novelGene_29584	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCCTCCTATGATATCC	NA	False	NA	NA	False	NA	NA	NA	118184261	118193043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_118184862_118189540
ES.36353.1	chr9	-	208	1	Intergenic	novelGene_29585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTCAAGGTTAGCC	NA	False	NA	NA	False	NA	NA	NA	118191417	118191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_118191200_118191400
ES.36354.1	chr9	+	186	1	Intergenic	novelGene_29586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	118196219	118196405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_118196200_118196400
ES.36355.1	chr9	-	179	1	Intergenic	novelGene_29587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118197286	118197107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_118197100_118197300
ES.36356.1	chr9	-	2640	4	NNC	ENSMUSG00000098161.2	novel	388	4	NA	NA	-33	28087	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	21.6384431561566	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGGCCTTCATGCGTC	NA	False	NA	NA	False	AATAAA	-44	NA	118235200	118205077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_118207408_118233371_118233493_118233797_118233891_118235104
ES.36356.11	chr9	-	1323	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-61	4949	multi-exon	FALSE	non_canonical	0	0	junction_1	22.796655456448	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTATTATTATTATTT	NA	False	NA	NA	False	TTTAAA	-40	NA	118235228	118226583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227473_118232126_118232223_118233371_118233493_118233797_118233891_118235104
ES.36356.12	chr9	-	2027	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-27	8	multi-exon	FALSE	non_canonical	2	8	junction_2	19.811612756159	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGCATTATTCTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	118235194	118231524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118233232_118233371_118233418_118233466_118233558_118233797_118233891_118235104
ES.36356.13	chr9	-	2471	2	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-46	4	intron_retention	FALSE	canonical	3	61	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAAGCTGCATTATTC	NA	False	NA	NA	False	AATAAA	-29	NA	118235213	118231528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118233891_118235104
ES.36356.14	chr9	-	2168	3	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-52	0	intron_retention	FALSE	canonical	3	48	junction_1	6.5	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCACAGAAAAGCTGCATT	NA	False	NA	NA	False	AATAAA	-25	NA	118235219	118231532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118233493_118233797_118233891_118235104
ES.36356.15	chr9	-	2188	3	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-33	-5	intron_retention	FALSE	canonical	2	2	junction_1	29.5	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCACGCACAGAAAAGCT	NA	False	NA	NA	False	AATAAA	-20	NA	118235200	118231537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118233537_118233797_118233891_118235104
ES.36356.16	chr9	-	2209	3	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-33	-5	intron_retention	FALSE	canonical	3	19	junction_1	21	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCACGCACAGAAAAGCT	NA	False	NA	NA	False	AATAAA	-20	NA	118235200	118231537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118233558_118233797_118233891_118235104
ES.36356.2	chr9	-	4694	1	Intergenic	novelGene_29588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATCTGGTTTGAATT	NA	False	NA	NA	False	NA	NA	NA	118224989	118220295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_118220300_118225000
ES.36356.3	chr9	-	1635	6	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-38	5359	multi-exon	FALSE	non_canonical	2	8	junction_3	18.5752523536021	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGTTCCCCATGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	118235205	118226173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227447_118232126_118232223_118233371_118233418_118233466_118233493_118233797_118233891_118235104
ES.36356.4	chr9	-	1719	6	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-60	5358	multi-exon	FALSE	non_canonical	1	3	junction_4	20.5970871727048	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGGTTCCCCATGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	118235227	118226174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227447_118232126_118232223_118233371_118233418_118233466_118233556_118233797_118233891_118235104
ES.36356.5	chr9	-	1782	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-48	5357	multi-exon	FALSE	non_canonical	0	0	junction_1	13.5531361684298	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATGGTTCCCCATGTA	NA	False	NA	NA	False	AATAAA	-16	NA	118235215	118226175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227476_118232126_118232223_118233371_118233558_118233797_118233891_118235108
ES.36356.6	chr9	-	1690	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-48	5355	multi-exon	FALSE	canonical	3	23	junction_1	14.6116391962025	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGATGGTTCCCCATG	NA	False	NA	NA	False	AATAAA	-14	NA	118235215	118226177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227447_118232126_118232223_118233371_118233493_118233797_118233891_118235104
ES.36356.7	chr9	-	1722	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-54	5355	multi-exon	FALSE	non_canonical	0	0	junction_1	22.796655456448	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGATGGTTCCCCATG	NA	False	NA	NA	False	AATAAA	-14	NA	118235221	118226177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227473_118232126_118232223_118233371_118233493_118233797_118233891_118235104
ES.36356.8	chr9	-	2731	6	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-66	5355	multi-exon	FALSE	non_canonical	1	3	junction_4	20.5970871727048	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGATGGTTCCCCATG	NA	False	NA	NA	False	AATAAA	-14	NA	118235233	118226177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227447_118232126_118233232_118233371_118233418_118233466_118233556_118233797_118233891_118235104
ES.36356.9	chr9	-	1691	5	Fusion	ENSMUSG00000098161.2_ENSMUSG00000103968.2	novel	388	4	NA	NA	-38	5330	multi-exon	FALSE	non_canonical	0	0	junction_1	20.7846096908265	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAATAAAAAATTTAA	NA	False	NA	NA	False	NA	NA	NA	118235205	118226202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_118227473_118232126_118232237_118233371_118233493_118233797_118233891_118235108
ES.36357.1	chr9	+	3642	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	-97	15	35	-15	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCTTCTGTACTATG	NA	False	NA	NA	False	AATAAA	-27	NA	118307314	118315185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.10	chr9	+	1698	5	NIC	ENSMUSG00000032446.15	novel	3560	6	NA	NA	425	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.69740215917033	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	ATTAAA	-30	NA	118308353	118314435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118308615_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.11	chr9	+	1214	5	FSM	ENSMUSG00000032446.15	ENSMUST00000150633.2	1647	5	432	1	432	-1	multi-exon	FALSE	canonical	3	18	junction_2	1.6393596310755	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118308360	118311824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300
ES.36357.2	chr9	+	3220	6	FSM	ENSMUSG00000032446.15	ENSMUST00000111763.8	2869	6	398	-749	-251	-17	multi-exon	FALSE	canonical	2	3	junction_5	6.66333249958307	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTCTTCTGTACTA	NA	False	NA	NA	False	AATAAA	-25	NA	118307677	118315183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313398
ES.36357.3	chr9	+	3241	6	NNC	ENSMUSG00000032446.15	novel	3560	6	NA	NA	-229	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	7.83836717690617	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTATAGCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	118307699	118315175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313347
ES.36357.4	chr9	+	3150	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	288	122	-229	-122	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTATGATGTCACAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	118307699	118315078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.5	chr9	+	3146	6	NNC	ENSMUSG00000032446.15	novel	3560	6	NA	NA	-229	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	8.06473806146238	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTCTTCTGTACTA	NA	False	NA	NA	False	AATAAA	-25	NA	118307699	118315183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118308615_118309534_118309635_118310386_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.6	chr9	+	1913	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	513	1134	-4	-368	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGTCCCTAGAGCATT	NA	False	NA	NA	False	AGTAAA	-38	NA	118307924	118314066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.7	chr9	+	2566	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	514	480	-3	286	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGTGGCTGGGA	NA	False	NA	NA	False	AATAAA	-16	NA	118307925	118314720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36357.8	chr9	+	2824	6	NNC	ENSMUSG00000032446.15	novel	3560	6	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	7.44580418759451	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTCTTCTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	118307930	118315182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313540
ES.36357.9	chr9	+	4971	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	551	-1962	34	1962	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCGTATTCCTTGTTT	NA	False	NA	NA	False	TATAAA	-14	NA	118307962	118317162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ES.36358.1	chr9	-	2722	5	NNC	ENSMUSG00000110692.2	novel	536	5	NA	NA	-728	245	intron_retention	FALSE	canonical	0	0	junction_1	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGCCTGCTTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	118318895	118314381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_118314745_118315798_118315968_118316237_118318006_118318151_118318347_118318668
ES.36358.2	chr9	-	672	4	NNC	ENSMUSG00000110692.2	novel	536	5	NA	NA	-629	-2539	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGACGCGCTTTTTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	118318796	118317165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_118317355_118317845_118318006_118318151_118318347_118318668
ES.36359.1	chr9	+	7628	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-61	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	57.6555182976455	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335273	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.12	chr9	+	7572	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	65.189791261271	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335320	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.14	chr9	+	7485	26	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	68.349525236098	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335321	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118387366_118387574_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.15	chr9	+	7610	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	66.9240180846709	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335321	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.16	chr9	+	7573	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	57.3947473623971	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118335321	118411588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.18	chr9	+	7695	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	63.0103607000909	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335321	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.19	chr9	+	7440	16	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-13	5221	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	36.3308256015314	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTATGGAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	118335321	118391007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809
ES.36359.2	chr9	+	7641	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-58	3	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	53.3849663424073	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335276	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.20	chr9	+	7660	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	56.4723864803198	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335324	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394754_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.21	chr9	+	7653	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	56.4723864803198	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATAGTGTTCATTGTG	NA	False	NA	4	True	AATAAA	-12	NA	118335324	118411584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394740_118396233_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.23	chr9	+	7669	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	70.3994431598874	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118335326	118411588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.24	chr9	+	7676	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.0102999564074	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAATAGTGTTCATTGT	NA	False	NA	3	True	AATAAA	-11	NA	118335327	118411583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359480_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.25	chr9	+	7588	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.5201645917126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335327	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394740_118396233_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.27	chr9	+	7642	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	60.790267290268	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATAATAGTGTTCATT	NA	False	NA	1	True	AATAAA	-9	NA	118335327	118411581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366316_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.29	chr9	+	7593	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.5201645917126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335327	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394754_118396242_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.3	chr9	+	7615	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	57.5079045950128	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335292	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394742_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.30	chr9	+	8867	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_2	64.0015495680178	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118335327	118411588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343342_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.31	chr9	+	7115	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-7	364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	62.3681975087584	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTTTATTGCATCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	118335327	118409024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408825
ES.36359.32	chr9	+	7692	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	64.9519816817442	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118335328	118411588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394754_118396242_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.33	chr9	+	7574	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.5201645917126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335328	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396242_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.35	chr9	+	7774	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_18	64.0517233483135	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335328	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118395975_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118405290_118405425_118406209_118406297_118410916
ES.36359.37	chr9	+	7492	22	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	61.8104409646534	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335328	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394742_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.38	chr9	+	7786	26	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_23	62.26621555868	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118335328	118411585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118405290_118405425_118406209_118406297_118408609_118408675_118410916
ES.36359.39	chr9	+	7356	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-5	69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.0418180831996	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTAGGGTGGTTTC	NA	False	NA	NA	False	TTTAAA	-19	NA	118335329	118411254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359520_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394742_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.4	chr9	+	3321	16	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-40	56	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	40.9843330500272	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGGATCAGGAAGCCA	NA	False	NA	76	True	NA	NA	NA	118335294	118385842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640
ES.36359.40	chr9	+	7726	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	76.6842371170387	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAATAGTGTTCATTGT	NA	False	NA	3	True	AATAAA	-11	NA	118335329	118411583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118339808_118339936_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.41	chr9	+	7506	22	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	58.9468033364216	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335330	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394754_118396241_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.43	chr9	+	12259	22	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_17	53.927767259851	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335332	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118394742_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.44	chr9	+	7729	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	67.1769920723523	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118335335	118411585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394745_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.46	chr9	+	7465	22	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	56.9564021513977	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335335	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389949_118396238_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.47	chr9	+	7398	22	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	67.4934447140245	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATAATAGTGTTCATTG	NA	False	NA	2	True	AATAAA	-10	NA	118335337	118411582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.48	chr9	+	7094	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-1	364	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	64.7917197035915	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTTTATTGCATCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	118335337	118409024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394746_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408825
ES.36359.49	chr9	+	7668	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	64.9519816817442	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335337	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394742_118396243_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.5	chr9	+	7540	23	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-38	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	54.2322256367988	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335296	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.50	chr9	+	7545	23	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_17	60.7559812380505	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335338	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118395975_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.51	chr9	+	7569	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.5201645917126	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAATAGTGTTCATTGT	NA	False	NA	3	True	AATAAA	-11	NA	118335338	118411583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394751_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.53	chr9	+	7199	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	7	364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	69.7555130238623	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTTTATTGCATCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	118335345	118409024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408825
ES.36359.57	chr9	+	7446	23	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	42	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	60.1087856781559	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118335380	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.58	chr9	+	7255	23	NNC	ENSMUSG00000038708.11	novel	1363	12	NA	NA	-3356	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	62.6713189176359	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118339891	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118339936_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.59	chr9	+	6426	13	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-9722	4793	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	45.6060272576139	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGCTTTCAGAGTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	118356200	118390579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809
ES.36359.6	chr9	+	7560	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.2345757497268	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATAGTGTTCATTGTG	NA	False	NA	4	True	AATAAA	-12	NA	118335312	118411584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359432_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.60	chr9	+	6314	16	NNC	ENSMUSG00000038708.11	novel	4461	11	NA	NA	1375	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.7534649804851	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118367297	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118367330_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.61	chr9	+	5500	16	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	2031	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	72.7534649804851	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118367953	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118384788_118385561_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.62	chr9	+	7157	13	ISM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	41269	0	-872	0	3prime_fragment	FALSE	canonical	3	96	junction_1	48.6931292210034	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118376603	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.64	chr9	+	4392	1	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	2446	-641	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCATAGAGTGTGGAG	NA	False	NA	NA	False	AATAAA	-16	NA	118379921	118384313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118379900_118384300
ES.36359.66	chr9	+	9694	10	NIC	ENSMUSG00000038708.11	novel	4461	11	NA	NA	-1114	-1	intron_retention	FALSE	canonical	3	74	junction_9	60.3768003846789	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118384733	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118406297_118408609_118408675_118410916
ES.36359.67	chr9	+	3919	4	ISM	ENSMUSG00000038708.11	ENSMUST00000211840.2	4461	11	-401	16702	-401	-7153	5prime_fragment	FALSE	canonical	3	183	junction_1	12.4988888395018	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAAGTGCAGTACTGGA	NA	False	NA	NA	False	NA	NA	NA	118385446	118394885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624
ES.36359.69	chr9	+	2878	11	FSM	ENSMUSG00000038708.11	ENSMUST00000211840.2	4461	11	1254	329	1254	73	multi-exon	FALSE	canonical	3	74	junction_10	60.3685348505329	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGGGTGGTTTCTTTT	NA	False	NA	NA	False	TTTAAA	-23	NA	118387101	118411258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.7	chr9	+	7649	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	56.3648659152209	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335312	118411587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.70	chr9	+	7699	7	NIC	ENSMUSG00000038708.11	novel	4461	11	NA	NA	-1273	-1	intron_retention	FALSE	canonical	3	147	junction_6	28.5564742610537	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118388155	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118396318_118398031_118398108_118401985_118406297_118410916
ES.36359.71	chr9	+	2697	1	Intergenic	novelGene_29590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCTGAGTCTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	118390016	118392713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_118390000_118392700
ES.36359.72	chr9	+	6772	5	NIC	ENSMUSG00000038708.11	novel	796	8	NA	NA	1054	-1	intron_retention	FALSE	canonical	3	147	junction_4	39.92101576864	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118390482	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.73	chr9	+	3731	7	NNC	ENSMUSG00000038708.11	novel	796	8	NA	NA	-1594	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.5149077211793	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118392749	118411585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118395455_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.74	chr9	+	2372	6	NIC	ENSMUSG00000038708.11	novel	796	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	147	junction_5	37.333095237336	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118394681	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ES.36359.75	chr9	+	2800	5	NIC	ENSMUSG00000038708.11	novel	796	8	NA	NA	1603	-1	intron_retention	FALSE	canonical	2	4	junction_3	97.1374670248303	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGTGTTCATTGTGCT	NA	False	NA	6	True	AATAAA	-14	NA	118396302	118411586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118398108_118401985_118402090_118405290_118405425_118406209_118406297_118410916
ES.36359.76	chr9	+	3697	1	Genic_Genomic	ENSMUSG00000038708.11	novel	NA	NA	NA	NA	2231	1	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTTCATTGTGCTTC	NA	False	NA	8	True	AATAAA	-16	NA	118407891	118411588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_118407900_118411600
ES.36359.8	chr9	+	7673	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	3	74	junction_24	53.463318161978	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	False	NA	10	True	AATAAA	-18	NA	118335312	118411590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.36359.9	chr9	+	7763	26	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	64.5947366276851	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATAGTGTTCATTGTGC	NA	False	NA	5	True	AATAAA	-13	NA	118335316	118411585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ES.3636.1	chr10	+	281	1	Intergenic	novelGene_2778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGTCATAACTCAACAAA	3185	False	NA	NA	False	AATAAA	-29	NA	95183520	95183801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95183500_95183800
ES.3636.2	chr10	+	175	1	Intergenic	novelGene_2779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTCCT	3186	False	NA	NA	False	NA	NA	NA	95183521	95183696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95183500_95183700
ES.36360.1	chr9	-	209	1	Intergenic	novelGene_29589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGTAACCAGAGAATTG	NA	False	NA	NA	False	TTTAAA	-14	NA	118378516	118378307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_118378300_118378500
ES.36361.1	chr9	+	3851	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	-39	3208	-39	72	multi-exon	TRUE	canonical	2	4	junction_19	2.10688335604858	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAGGAACTTATTCTA	NA	False	NA	NA	False	AATACA	-23	NA	118435718	118726863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
ES.36361.2	chr9	+	4938	28	NNC	ENSMUSG00000039115.14	novel	7020	28	NA	NA	-35	1169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	2.43319521565287	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCCCAAAAAAAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	118435722	118727960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706286_118716831_118716952_118726301
ES.36361.4	chr9	+	1893	1	Genic_Genomic	ENSMUSG00000039115.14	novel	NA	NA	NA	NA	-35	-198684	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTTGTAGAATACACCCA	NA	False	NA	NA	False	NA	NA	NA	118435722	118437615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_118435700_118437600
ES.36361.5	chr9	+	4942	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	-17	2095	-17	1185	multi-exon	FALSE	canonical	2	4	junction_19	2.10688335604858	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCACACCCAGCTCTTT	NA	False	NA	NA	False	NA	NA	NA	118435740	118727976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
ES.36361.6	chr9	+	6983	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	36	1	36	-1	multi-exon	FALSE	canonical	2	4	junction_19	2.10688335604858	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCGTGTCTGACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	118435793	118730070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
ES.36361.7	chr9	+	1925	13	ISM	ENSMUSG00000039115.14	ENSMUST00000124360.8	1935	14	57350	-30	-38277	30	3prime_fragment	FALSE	canonical	2	4	junction_4	1.4790199457749	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATCTTGGAAATACA	NA	False	NA	NA	False	ATTAAA	-23	NA	118598074	118726821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
ES.36362.1	chr9	-	2713	5	Antisense	novelGene_ENSMUSG00000039115.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.87082869338697	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCGGAACCATAACAAAT	9151	False	NA	NA	False	AATAAA	-23	NA	118692713	118671856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_118674206_118676704_118676747_118687184_118687326_118692324_118692461_118692668
ES.36362.2	chr9	-	3661	3	Antisense	novelGene_ENSMUSG00000039115.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGTCTGTTTGCTTT	9315	False	NA	NA	False	NA	NA	NA	118692549	118676773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_118680069_118687184_118687326_118692324
ES.36362.3	chr9	-	3544	4	Antisense	novelGene_ENSMUSG00000039115.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTATGACTTGCTTTGTT	9203	False	NA	NA	False	NA	NA	NA	118692661	118676787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_118680015_118687184_118687326_118692324_118692461_118692621
ES.36363.1	chr9	+	205	1	Antisense	novelGene_ENSMUSG00000086119.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTCTACTAAAGGTAGA	NA	False	NA	NA	False	NA	NA	NA	118734884	118735089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_118734900_118735100
ES.36364.1	chr9	+	1710	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	-178	3057	-178	32	multi-exon	FALSE	canonical	0	0	junction_2	3.56284683238284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGCAAAAACTTTGATA	NA	False	NA	NA	False	AAAACA	-37	NA	118755342	118870009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
ES.36364.2	chr9	+	4671	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	39	-121	39	121	multi-exon	FALSE	canonical	0	0	junction_2	3.56284683238284	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCGTGGTTGATCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	118755559	118873187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
ES.36364.3	chr9	+	4678	9	NNC	ENSMUSG00000047409.14	novel	4589	8	NA	NA	101	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.63145976158349	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCGTGGTTGATC	NA	False	NA	NA	False	AATAAA	-12	NA	118755621	118873184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118756009_118758928_118759001_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
ES.36364.4	chr9	+	3907	3	ISM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	175	20548	175	-10178	5prime_fragment	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGCAACAAGCCATGATG	NA	False	NA	NA	False	AATAAA	-23	NA	118755695	118852518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_118756009_118840302_118840458_118849079
ES.36364.5	chr9	+	5535	3	FSM	ENSMUSG00000047409.14_ENSMUSG00000065513.3	ENSMUST00000174132.2	1200	3	-1128	-3207	77	118	multi-exon	FALSE	canonical	3	7	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCGTGGTTGATC	NA	False	NA	NA	False	AATAAA	-12	NA	118860940	118873184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118862697_118866428_118866615_118869591
ES.36364.6	chr9	+	2360	3	FSM	ENSMUSG00000047409.14_ENSMUSG00000065513.3	ENSMUST00000174132.2	1200	3	-1128	-32	77	32	multi-exon	FALSE	canonical	3	7	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGCAAAAACTTTGATA	NA	False	NA	NA	False	AAAACA	-37	NA	118860940	118870009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118862697_118866428_118866615_118869591
ES.36365.1	chr9	-	180	1	Intergenic	novelGene_29591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATTATTATAAAATAAT	NA	False	NA	NA	False	AATAAA	-9	NA	118874745	118874565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_118874600_118874700
ES.36366.1	chr9	+	2731	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	-6	184	-6	-2	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGTGTGCCTGTGTGCCT	4701	False	NA	12	True	AATAAA	-25	NA	118881839	118900403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.10	chr9	+	1519	10	NNC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.45685459153476	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	False	NA	3	True	AATAAA	-16	NA	118892510	118900394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118892553_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.11	chr9	+	3799	9	NNC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_1	9.64284060845143	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGTGTGGCACGTGTGC	NA	False	NA	2	True	AATAAA	-15	NA	118892511	118900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118892553_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.3	chr9	+	2638	20	NNC	ENSMUSG00000038775.15	novel	2909	20	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	9.19140873097447	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGTGTGGCACGTGTGC	4709	False	NA	2	True	AATAAA	-15	NA	118881847	118900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892696_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.4	chr9	+	3990	19	NNC	ENSMUSG00000038775.15	novel	2909	20	NA	NA	4	-1	intron_retention	TRUE	non_canonical	0	0	junction_10	10.3454230352257	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGTGTGGCACGTGTGC	4711	False	NA	2	True	AATAAA	-15	NA	118881849	118900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894170_118894346_118894526_118894665_118894927_118895089_118895768_118895949_118896478_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.5	chr9	+	3272	19	NNC	ENSMUSG00000038775.15	novel	2909	20	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_15	8.84590300647707	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGTGTGGCACGTGTGC	4711	False	NA	2	True	AATAAA	-15	NA	118881849	118900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898932_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.6	chr9	+	2609	20	NNC	ENSMUSG00000038775.15	novel	360	4	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.48332842442674	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGTGTGGCACGTGTGC	4829	False	NA	2	True	AATAAA	-15	NA	118881967	118900393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118882030_118886850_118886923_118887072_118887148_118887495_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.7	chr9	+	4765	5	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	14	junction_1	7.1894019222742	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGGTGTGGCACGTGTGCC	NA	False	NA	3	True	AATAAA	-16	NA	118892508	118900394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118899883_118900201
ES.36366.8	chr9	+	1342	8	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.4393290893972	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGTGGCACGTGTGCCT	NA	False	NA	4	True	AATAAA	-17	NA	118892508	118900395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118892670_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ES.36366.9	chr9	+	1773	10	NIC	ENSMUSG00000038775.15	novel	1645	11	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	10.0345083598895	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTGATTATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	118892510	118900597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118892670_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899690_118899883_118900201
ES.36367.1	chr9	-	2700	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	0	6	0	-6	multi-exon	FALSE	canonical	3	27	junction_4	6.31163486696415	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATCCTTCTAGTCTCT	8079	False	NA	NA	False	TATAAA	-19	NA	118917329	118900600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ES.36367.2	chr9	-	3237	11	NIC	ENSMUSG00000010660.4	novel	2715	15	NA	NA	14	-6	intron_retention	FALSE	canonical	3	6	junction_10	10.0503731274018	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATCCTTCTAGTCTCT	2852	False	NA	NA	False	TATAAA	-19	NA	118922556	118900600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118900956_118901090_118901241_118901317_118901722_118902523_118903392_118903477_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ES.36367.3	chr9	-	2581	15	NNC	ENSMUSG00000010660.4	novel	2706	15	NA	NA	3237	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	10.3954954923088	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATCCTTCTAGTCTCT	NA	False	NA	NA	False	TATAAA	-19	NA	118914092	118900600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118914017
ES.36367.4	chr9	-	2661	15	NNC	ENSMUSG00000010660.4	novel	2706	15	NA	NA	0	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.8298529207794	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATCACA	8079	False	NA	NA	False	NA	NA	NA	118917329	118900621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905046_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ES.36367.5	chr9	-	2969	13	NIC	ENSMUSG00000010660.4	novel	2706	15	NA	NA	28	-27	intron_retention	FALSE	canonical	3	27	junction_4	6.27328993963029	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATCACA	8107	False	NA	NA	False	NA	NA	NA	118917301	118900621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118903392_118903477_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ES.36367.6	chr9	-	2618	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	12	27	12	-27	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATCACA	2850	False	NA	NA	False	NA	NA	NA	118922558	118900621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ES.36367.7	chr9	-	2699	15	NIC	ENSMUSG00000010660.4	novel	2706	15	NA	NA	38	-27	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	10.5453345908346	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATCACA	8117	False	NA	NA	False	NA	NA	NA	118917291	118900621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118903049_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ES.36367.8	chr9	-	2871	14	NIC	ENSMUSG00000010660.4	novel	2706	15	NA	NA	50	-27	intron_retention	FALSE	canonical	3	27	junction_4	6.21888705581776	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATCACA	8129	False	NA	NA	False	NA	NA	NA	118917279	118900621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ES.36368.1	chr9	+	185	1	Intergenic	novelGene_29592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAGGCAGGCAGA	1200	False	NA	NA	False	NA	NA	NA	118927868	118928053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_118927900_118928100
ES.36369.1	chr9	+	2142	12	NNC	ENSMUSG00000038060.16	novel	2318	12	NA	NA	1	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.715818897637437	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTGTTTCTCTTTATT	4909	False	NA	NA	False	NA	NA	NA	118931577	118954093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118931994_118934869_118935021_118939168_118939280_118941124_118941313_118941479_118941695_118944031_118944111_118948715_118948804_118949870_118950045_118950855_118950993_118952212_118952306_118953187_118953408_118953823
ES.36369.2	chr9	+	1305	5	NNC	ENSMUSG00000038060.16	novel	2318	12	NA	NA	5	-12441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.707106781186548	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTCGGTAAATCTCCAA	4913	False	NA	NA	False	ATTAAA	-14	NA	118931581	118941922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_118931994_118934869_118935021_118939168_118939280_118941124_118941313_118941479
ES.36369.3	chr9	+	4639	18	NIC	ENSMUSG00000038060.16	novel	5263	37	NA	NA	356	2169	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	0.922611008315184	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTCTAGATTGGGTTT	5264	False	NA	NA	False	NA	NA	NA	118931932	118961477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_118931994_118934869_118935021_118939168_118939280_118941124_118941313_118941476_118941695_118944031_118944111_118948715_118948804_118949870_118950045_118950855_118950993_118952212_118952306_118953187_118953279_118953823_118953987_118955221_118955415_118956055_118956115_118956483_118956653_118957085_118957180_118957567_118957727_118959066
ES.3637.1	chr10	+	473	3	NNC	ENSMUSG00000100550.3	novel	642	3	NA	NA	3138	16	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGAAGGCCCGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95193887	95199094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95193983_95194128_95194221_95198808
ES.36370.1	chr9	-	6502	7	NIC	ENSMUSG00000010651.5	novel	1689	12	NA	NA	57	-19	intron_retention	FALSE	canonical	2	3	junction_4	61.1076009092886	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTGCAGTCATTTCAT	NA	False	NA	NA	False	AGTAAA	-16	NA	118986104	118977109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118979973_118980883_118984871_118985658_118985753_118985891
ES.36370.2	chr9	-	3316	10	NIC	ENSMUSG00000010651.5	novel	1689	12	NA	NA	48	-21	intron_retention	FALSE	canonical	1	2	junction_7	64.0146588150704	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGTTGCAGTCATTTC	NA	False	NA	NA	False	AGTAAA	-14	NA	118986113	118977111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982993_118984871_118985658_118985753_118985891
ES.36370.3	chr9	-	2764	9	NIC	ENSMUSG00000010651.5	novel	1689	12	NA	NA	28	-21	intron_retention	TRUE	canonical	1	1	junction_7	56.8391370448215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGTTGCAGTCATTTC	NA	False	NA	NA	False	AGTAAA	-14	NA	118986133	118977111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118985658_118985753_118985891
ES.36370.4	chr9	-	1661	12	FSM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	5	23	5	-23	multi-exon	FALSE	canonical	2	3	junction_6	59.9400526973023	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGGTTGCAGTCATT	NA	False	NA	NA	False	AGTAAA	-12	NA	118986156	118977113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118984812_118984871_118985658_118985753_118985891
ES.36371.1	chr9	+	196	1	Intergenic	novelGene_29593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATCAATTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	119004331	119004527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119004300_119004500
ES.36372.1	chr9	+	2237	4	Antisense	novelGene_ENSMUSG00000092212.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.68178700572909	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCGATGGGTGTTAT	658	False	NA	NA	False	NA	NA	NA	119053536	119061418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_119053682_119057772_119058657_119059019_119059410_119060600
ES.36372.2	chr9	+	1318	2	Antisense	novelGene_ENSMUSG00000092212.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGCTTGTTATTATTA	658	False	NA	NA	False	NA	NA	NA	119053536	119058945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_119053682_119057772
ES.36373.1	chr9	-	4100	7	NNC	ENSMUSG00000092212.4	novel	1458	6	NA	NA	-2345	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	4.82182538049648	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCAGAGTTGTACTGTC	NA	False	NA	NA	False	NA	NA	NA	119063103	119049557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119049990_119050186_119050403_119051512_119051622_119051804_119052020_119052238_119052540_119059637_119059742_119060380
ES.36374.1	chr9	+	177	1	Intergenic	novelGene_29594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTCATT	1262	False	NA	NA	False	NA	NA	NA	119103758	119103935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119103800_119103900
ES.36375.1	chr9	+	1769	2	Antisense	novelGene_ENSMUSG00000036737.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAATGAAAAAGCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	119113513	119135399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_119113757_119133873
ES.36375.2	chr9	+	8368	1	Antisense	novelGene_ENSMUSG00000036737.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGCAGGTGAGATG	NA	False	NA	NA	False	NA	NA	NA	119113513	119121881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_119113500_119121900
ES.36376.1	chr9	+	289	1	Intergenic	novelGene_29595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTATTATTTTA	6281	False	NA	NA	False	NA	NA	NA	119139882	119140171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119139900_119140200
ES.36377.1	chr9	-	4926	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-279	0	-279	0	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5293	False	NA	47	True	AATAAA	-29	NA	119151772	119067497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.10	chr9	-	4349	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.5438921917408	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5612	False	NA	41	True	AATAAA	-23	NA	119151453	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151322
ES.36377.11	chr9	-	4637	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.8585493004585	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5571	False	NA	41	True	AATAAA	-23	NA	119151494	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073822_119073871_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.12	chr9	-	7255	15	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-23	-6	intron_retention	FALSE	canonical	3	12	junction_13	72.3122833724023	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5549	False	NA	41	True	AATAAA	-23	NA	119151516	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070
ES.36377.13	chr9	-	4750	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.8814236135632	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5568	False	NA	41	True	AATAAA	-23	NA	119151497	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071960_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.14	chr9	-	6508	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	230	junction_9	21.3577232810522	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGCTTTCATTTAT	5571	False	NA	40	True	AATAAA	-22	NA	119151494	119067504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.17	chr9	-	4457	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-234	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.5438921917408	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGCTTTCATTTAT	5338	False	NA	40	True	AATAAA	-22	NA	119151727	119067504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133980_119151483
ES.36377.18	chr9	-	4242	1	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	682	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGCTTTCATTTAT	NA	False	NA	40	True	AATAAA	-22	NA	119071746	119067504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119067500_119071700
ES.36377.19	chr9	-	6620	18	NIC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	16	-7	intron_retention	FALSE	canonical	3	9	junction_14	89.6184916657433	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGCTTTCATTTAT	5588	False	NA	40	True	AATAAA	-22	NA	119151477	119067504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
ES.36377.2	chr9	-	8826	18	NIC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	10	0	intron_retention	FALSE	canonical	3	9	junction_14	90.7550793568368	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5582	False	NA	47	True	AATAAA	-29	NA	119151483	119067497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
ES.36377.21	chr9	-	4752	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	90.857370248071	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGCTTTCATTTAT	5578	False	NA	40	True	AATAAA	-22	NA	119151487	119067504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119094531_119094650_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.25	chr9	-	3939	14	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	193	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	77.1876986857515	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATGCTTTCATTTA	5870	False	NA	39	True	AATAAA	-21	NA	119151195	119067505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.28	chr9	-	4392	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	25	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	73.9764527100047	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATGCTTTCATTTA	5597	False	NA	39	True	AATAAA	-21	NA	119151468	119067505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119151070
ES.36377.3	chr9	-	7356	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTTCATTTATTTAT	5560	False	NA	44	True	AATAAA	-26	NA	119151505	119067500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.30	chr9	-	4334	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	188	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.8814236135632	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATATAAATGCTTTCAT	5865	False	NA	36	True	AATAAA	-18	NA	119151200	119067508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071846_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.32	chr9	-	4441	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	34	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	118.942563169512	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATATAAATGCTTTC	5606	False	NA	34	True	AATAAA	-16	NA	119151459	119067510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119092012_119092186_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070_119151100_119151322
ES.36377.34	chr9	-	7866	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	10	-13	intron_retention	FALSE	canonical	3	230	junction_8	21.0423910766391	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATATAAATGCTTTC	5582	False	NA	34	True	AATAAA	-16	NA	119151483	119067510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119073775_119074607_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.35	chr9	-	4667	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	-47	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	90.1709111070557	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATATATAAATGCTT	5630	False	NA	32	True	AATAAA	-14	NA	119151435	119067512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119109312_119109406_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.36	chr9	-	4639	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	14	-15	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_6	68.0263535336601	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATATATAAATGCTT	5586	False	NA	32	True	AATAAA	-14	NA	119151479	119067512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076216_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.37	chr9	-	4406	18	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-12	-15	at_least_one_novel_splicesite	TRUE	canonical	1	6	junction_17	90.8252819093342	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATATATAAATGCTT	5560	False	NA	32	True	AATAAA	-14	NA	119151505	119067512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070_119151194_119151322
ES.36377.38	chr9	-	7044	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-47	-245	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTGTTTTTTGTGTTTT	5630	False	NA	NA	False	ATTAAA	-17	NA	119151435	119067742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.39	chr9	-	4401	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-1	247	-1	-247	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCTTGTTTTTTGTGTT	5571	False	NA	NA	False	ATTAAA	-15	NA	119151494	119067744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.4	chr9	-	4786	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-252	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	69.1425158639748	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTTTCATTTATTTA	5320	False	NA	43	True	AATAAA	-25	NA	119151745	119067501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070
ES.36377.40	chr9	-	5880	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-255	516	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCGCCTTCTGCTCCTC	5317	False	NA	NA	False	AATAAA	-20	NA	119151748	119069219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.41	chr9	-	2921	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	1	1725	1	513	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGGCCGCCTTCTGCTC	5573	False	NA	NA	False	AATAAA	-17	NA	119151492	119069222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.42	chr9	-	2418	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	-1	2230	-1	8	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTACTGTTTTTTT	5571	False	NA	-5	True	ATTAAA	-27	NA	119151494	119069727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.43	chr9	-	2495	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	105.207980380779	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAGAGAATTTAATTAC	5610	False	NA	-14	True	ATTAAA	-18	NA	119151455	119069736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123586_119133870_119133984_119151070
ES.36377.44	chr9	-	5357	18	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	1	junction_9	118.767633911988	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAGAGAATTTAATTAC	5570	False	NA	-14	True	ATTAAA	-18	NA	119151495	119069736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119094531_119094650_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
ES.36377.45	chr9	-	5273	17	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_8	94.2781580948101	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAGAGAATTTAATTAC	5580	False	NA	-14	True	ATTAAA	-18	NA	119151485	119069736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119092012_119092186_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.46	chr9	-	3248	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	230	junction_9	22.3798877343029	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCCAGAGAATTTAATTA	5564	False	NA	-15	True	ATTAAA	-17	NA	119151501	119069737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.47	chr9	-	2553	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	90.6991363428193	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCCCAGAGAATTTAAT	5573	False	NA	-17	True	ATTAAA	-15	NA	119151492	119069739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119115720_119115870_119123480_119123590_119133870_119133984_119151070
ES.36377.48	chr9	-	5340	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-235	-4	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCCCAGAGAATTTAAT	5337	False	NA	-17	True	ATTAAA	-15	NA	119151728	119069739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ES.36377.49	chr9	-	5403	1	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-10875	-27477	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACCCACTCTTTAACT	NA	False	NA	NA	False	NA	NA	NA	119104713	119099310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119099300_119104700
ES.36377.5	chr9	-	4417	19	NNC	ENSMUSG00000036737.13	novel	2433	19	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	67.8464133353351	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGCTTTCATTTATTT	5578	False	NA	42	True	AATAAA	-24	NA	119151487	119067502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070_119151100_119151318
ES.36377.50	chr9	-	172	1	Intergenic	novelGene_29596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAACAAAG	9782	False	NA	NA	False	NA	NA	NA	119147283	119147111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119147100_119147300
ES.36377.6	chr9	-	4510	17	NNC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	-47	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	93.9790535172599	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5630	False	NA	41	True	AATAAA	-23	NA	119151435	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119070283_119070776_119070842_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133980_119151070
ES.36377.8	chr9	-	4774	19	FSM	ENSMUSG00000036737.13	ENSMUST00000128880.8	2433	19	-109	-2232	-4	-6	multi-exon	FALSE	canonical	3	9	junction_15	88.2525136913363	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTTCATTTATT	5568	False	NA	41	True	AATAAA	-23	NA	119151497	119067503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
ES.36378.1	chr9	+	177	1	Intergenic	novelGene_29597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	119152614	119152791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119152600_119152800
ES.36379.1	chr9	+	158	1	Intergenic	novelGene_29598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATACATAAATAA	NA	False	NA	NA	False	NA	NA	NA	119154684	119154842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119154700_119154800
ES.36379.2	chr9	+	374	1	Intergenic	novelGene_29599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119154684	119155058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119154700_119155100
ES.3638.1	chr10	+	6132	1	Antisense	novelGene_ENSMUSG00000020027.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGCCACCTTAAGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	95215118	95221250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_95215100_95221200
ES.3638.2	chr10	+	1760	1	Antisense	novelGene_ENSMUSG00000020027.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAAGAAAAAAAAAG	1793	False	NA	NA	False	NA	NA	NA	95219815	95221575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_95219800_95221600
ES.36380.1	chr9	+	154	1	Intergenic	novelGene_29600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTTAAAAAGG	5273	False	NA	NA	False	NA	NA	NA	119167904	119168058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119167900_119168100
ES.36381.1	chr9	+	1792	13	NIC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	78.0953832751264	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7471	False	NA	28	True	AGTAAA	-19	NA	119170102	119179365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119170226_119170452_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.10	chr9	+	5478	7	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	257	junction_1	25.2548125226769	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTGCTTGTCATT	7892	False	NA	21	True	AGTAAA	-12	NA	119170523	119179358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119171847_119173238_119175635_119176795_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.11	chr9	+	1553	11	NIC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	84.7362968272747	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7894	False	NA	28	True	AGTAAA	-19	NA	119170525	119179365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.12	chr9	+	1691	12	NNC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.146641677896	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7895	False	NA	23	True	AGTAAA	-14	NA	119170526	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119170752_119170890_119170985_119171317_119171462_119171788_119171847_119173238_119173319_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.14	chr9	+	4697	8	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	14	-4	intron_retention	FALSE	canonical	3	257	junction_1	23.6332522570402	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7905	False	NA	23	True	AGTAAA	-14	NA	119170536	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119171847_119173238_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.16	chr9	+	3525	5	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-1209	-2	intron_retention	FALSE	canonical	3	271	junction_4	20.573040611441	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGCTTGTCATTTCCT	NA	False	NA	25	True	AGTAAA	-16	NA	119173954	119179362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119175635_119176795_119177838_119177986_119178167_119178419_119178704_119179023
ES.36381.17	chr9	+	3347	6	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-724	-4	intron_retention	FALSE	canonical	3	271	junction_5	23.349518196314	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	NA	False	NA	23	True	AGTAAA	-14	NA	119174439	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.18	chr9	+	3782	3	NIC	ENSMUSG00000036138.17	novel	768	9	NA	NA	87	2	intron_retention	FALSE	canonical	3	321	junction_1	0.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCATTTCCTTCAGG	NA	False	NA	30	True	AGTAAA	-21	NA	119175250	119179367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119178167_119178419_119178476_119178557
ES.36381.2	chr9	+	1724	13	NNC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	-95	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	77.5669961316596	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7633	False	NA	23	True	AGTAAA	-14	NA	119170264	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119170325_119170452_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.3	chr9	+	1813	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	-51	0	-51	0	multi-exon	FALSE	canonical	3	245	junction_2	23.8777880116768	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7677	False	NA	28	True	AGTAAA	-19	NA	119170308	119179365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.4	chr9	+	3660	11	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-60	-2	intron_retention	FALSE	canonical	3	245	junction_2	25.0047995392885	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGCTTGTCATTTCCT	7788	False	NA	25	True	AGTAAA	-16	NA	119170419	119179362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.5	chr9	+	5950	7	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-59	-4	intron_retention	FALSE	canonical	3	245	junction_2	31.2125330952523	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7789	False	NA	23	True	AGTAAA	-14	NA	119170420	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.6	chr9	+	1538	13	NNC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.4178034196363	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7843	False	NA	23	True	AGTAAA	-14	NA	119170474	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119170563_119170666_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.7	chr9	+	5838	10	NNC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_2	118.744460559557	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7865	False	NA	28	True	AGTAAA	-19	NA	119170496	119179365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119170752_119170890_119171273_119171428_119171462_119171788_119171847_119173238_119173319_119173531_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.8	chr9	+	3587	13	NNC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-12	-4	intron_retention	FALSE	canonical	0	0	junction_1	122.594946198175	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7879	False	NA	23	True	AGTAAA	-14	NA	119170510	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119170596_119170666_119170752_119170890_119170985_119171370_119171462_119171788_119171847_119173238_119173319_119173531_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36381.9	chr9	+	3780	10	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	245	junction_2	25.5342906696074	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	7879	False	NA	23	True	AGTAAA	-14	NA	119170510	119179360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ES.36382.1	chr9	-	3259	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	-1300	1	70	-1	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGACTGACGGTATGT	NA	False	NA	0	True	AATAAA	-25	NA	119170407	119165000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
ES.36383.1	chr9	-	1881	1	Intergenic	novelGene_29601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGGGCTGGTGAGAT	7543	False	NA	NA	False	NA	NA	NA	119182874	119180993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119181000_119182900
ES.36384.1	chr9	+	3230	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	166	-13	-22	4	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119186612	119222399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.11	chr9	+	6599	19	NIC	ENSMUSG00000035769.10	novel	3702	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_7	25.1952866452399	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186652	119222395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119186774_119188297_119188381_119190179_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.12	chr9	+	3221	19	NIC	ENSMUSG00000035769.10	novel	3702	20	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	27.189152248645	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTCCTTGCTTCCCT	NA	False	NA	25	True	AATAAA	-25	NA	119186652	119222400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.13	chr9	+	2518	18	ISM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	207	1874	1	-1874	5prime_fragment	FALSE	canonical	3	51	junction_3	12.5802613557329	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTATGAGTGTTTTGTC	NA	False	NA	NA	False	TTTAAA	-14	NA	119186653	119220512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495
ES.36384.14	chr9	+	5359	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	23	-2248	5	1780	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATATAATCAGTATAATG	NA	False	NA	NA	False	NA	NA	NA	119186657	119224643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.15	chr9	+	872	9	NNC	ENSMUSG00000035769.10	novel	3383	19	NA	NA	79	11190	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	25.1864919153105	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCTTCCTGATTTCT	NA	False	NA	NA	False	NA	NA	NA	119186731	119201667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119201426
ES.36384.17	chr9	+	3422	30	Fusion	ENSMUSG00000035769.10_ENSMUSG00000061393.15	novel	3702	20	NA	NA	93	15	multi-exon	TRUE	canonical	0	0	junction_20	58.980619159053	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119186745	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806_119221093_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.18	chr9	+	3193	20	NIC	ENSMUSG00000035769.10	novel	3702	20	NA	NA	93	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	24.7680654010747	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186745	119222395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.19	chr9	+	3993	11	NNC	ENSMUSG00000035769.10	novel	3134	18	NA	NA	-5272	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.1933197590531	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119201984	119222395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119203485_119207309_119207392_119208915_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.2	chr9	+	3158	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	-20	-4	-20	4	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119186614	119222399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.20	chr9	+	2247	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-410	1338	-84	142	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTTTTTACCAGCATA	NA	False	NA	NA	False	NA	NA	NA	119231099	119262723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.21	chr9	+	2206	12	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	-29	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.7322970872548	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231154	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256185_119256327_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.22	chr9	+	2110	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	-28	85	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTATTATTATTATAAT	NA	False	NA	NA	False	CATAAA	-40	NA	119231155	119262666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.23	chr9	+	2180	10	FSM	ENSMUSG00000061393.15	ENSMUST00000165044.3	2093	10	-27	-60	-27	60	multi-exon	FALSE	canonical	3	128	junction_3	24.155872429691	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGCTGCTATTTTA	NA	False	NA	NA	False	CATAAA	-15	NA	119231156	119262641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.24	chr9	+	8800	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-338	-5287	-12	5287	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTTACCAGTTCAAA	NA	False	NA	22	True	TTTAAA	-3	NA	119231171	119269348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.25	chr9	+	3506	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	-12	17	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231171	119264078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.26	chr9	+	3529	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-337	-17	-11	17	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231172	119264078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.27	chr9	+	3533	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	56.2466887914302	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231183	119264078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257475_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.29	chr9	+	8748	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	11	5282	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCCTTTTTTACCAGT	NA	False	NA	17	True	NA	NA	NA	119231194	119269343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.3	chr9	+	5297	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	169	-2083	-19	1606	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAAAGGCATTAGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	119186615	119224469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.30	chr9	+	10619	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	11	7153	intron_retention	FALSE	canonical	3	57	junction_3	40.556133938037	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAATTTGTGAT	NA	False	NA	20	True	NA	NA	NA	119231194	119271214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.31	chr9	+	10768	12	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	7139	intron_retention	FALSE	canonical	1	1	junction_1	70.7322970872548	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTCGTCTGTATTTTTT	NA	False	NA	6	True	NA	NA	NA	119231196	119271200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256185_119256327_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.32	chr9	+	3496	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	17	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	54.8876124457969	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231196	119264078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258939_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.33	chr9	+	3149	10	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	15	intron_retention	FALSE	canonical	3	57	junction_3	39.7184535896799	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231196	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119261694_119261778_119261910_119262332
ES.36384.34	chr9	+	2023	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-313	1465	13	15	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231196	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.35	chr9	+	2063	12	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.9162001098235	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAGAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	119231196	119262565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256255_119256327_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.36	chr9	+	10639	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-313	-7151	13	7151	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTTAATTTGTG	NA	False	NA	18	True	NA	NA	NA	119231196	119271212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.37	chr9	+	2897	12	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	13	17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	61.6453466234928	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTTCTAGTCAGT	NA	False	NA	NA	False	AATAGA	-17	NA	119231196	119264078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332_119263241_119263824
ES.36384.38	chr9	+	3476	9	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	14	15	intron_retention	FALSE	canonical	3	128	junction_2	21.2246171932499	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231197	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119261694_119261778_119261910_119262332
ES.36384.4	chr9	+	5482	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	169	-2268	-19	1791	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAATGAAAAGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	119186615	119224654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.40	chr9	+	2492	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-310	993	16	487	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGTGGGTGTAATGGGT	NA	False	NA	NA	False	AAGAAA	-16	NA	119231199	119263068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.41	chr9	+	3383	12	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	43	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	54.7059759226804	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAGAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119231226	119264050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332_119263117_119263180
ES.36384.42	chr9	+	1942	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.3859759881979	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231232	119262567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260281_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.43	chr9	+	2004	10	FSM	ENSMUSG00000061393.15	ENSMUST00000035093.15	1729	10	-275	0	51	0	multi-exon	FALSE	canonical	3	57	junction_3	42.7369213262308	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119231234	119262567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.44	chr9	+	2335	10	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	100	15	intron_retention	FALSE	canonical	3	57	junction_3	42.3305627556483	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231283	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778
ES.36384.45	chr9	+	1999	10	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	122	15	intron_retention	FALSE	canonical	3	128	junction_3	24.1129031592098	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231305	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261910_119262332
ES.36384.46	chr9	+	1786	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	-73	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.3859759881979	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231436	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259462_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.47	chr9	+	1657	11	NNC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	11	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.3446597339282	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119231520	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257532_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.48	chr9	+	1629	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	26	-2	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAGAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	119231535	119262565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.49	chr9	+	3075	11	NNC	ENSMUSG00000061393.15	novel	599	4	NA	NA	285	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.3689811657833	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAGAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119231794	119264050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119231860_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.5	chr9	+	3235	19	NNC	ENSMUSG00000035769.10	novel	3702	20	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.4888666180677	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186615	119222395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198703_119198752_119199344_119199445_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.50	chr9	+	3211	11	NNC	ENSMUSG00000061393.15	novel	599	4	NA	NA	-4740	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	57.0936949233451	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTTTTGTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	119254671	119262596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119256327_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ES.36384.51	chr9	+	6546	3	NNC	ENSMUSG00000061393.15	novel	544	3	NA	NA	274	5269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATTTTTAAAGAGC	NA	False	NA	4	True	NA	NA	NA	119261777	119269330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119261910_119262332_119263241_119263824
ES.36384.6	chr9	+	2470	17	ISM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	-19	1899	-19	-1890	5prime_fragment	FALSE	canonical	3	22	junction_2	17.1537167984084	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATTTATTTTATGG	NA	False	NA	NA	False	NA	NA	NA	119186615	119220496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495
ES.36384.7	chr9	+	5813	16	NIC	ENSMUSG00000035769.10	novel	3134	18	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	22	junction_2	17.6484182482926	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCACCTCTCCTTGC	NA	False	NA	19	True	AATAAA	-19	NA	119186624	119222394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119212500_119215384_119215444_119217746_119219591_119220806
ES.36384.8	chr9	+	6369	19	NIC	ENSMUSG00000035769.10	novel	3383	19	NA	NA	-1	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	20.8552477334769	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACCTCTCCTTGCTTCCC	NA	False	NA	24	True	AATAAA	-24	NA	119186633	119222399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119186774_119188297_119188381_119190179_119190250_119190402_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36384.9	chr9	+	4528	21	NNC	ENSMUSG00000035769.10	novel	3383	19	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.5158293560553	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCACCTCTCCTTGC	NA	False	NA	19	True	AATAAA	-19	NA	119186650	119222394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119186774_119188297_119188381_119190179_119190250_119190402_119191605_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209376_119209516_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ES.36385.1	chr9	+	2725	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGACTGCATATTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	119273988	119293307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.10	chr9	+	2172	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-27	479	0	-478	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTTCTGCTCCTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	119274025	119292826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.11	chr9	+	3956	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACCGGTGATTGGCC	NA	False	NA	NA	False	NA	NA	NA	119274027	119294577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.12	chr9	+	3930	7	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	31	junction_2	22.4548930574657	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCACGCCTGACTGCATA	NA	False	NA	NA	False	AAAAAG	-1	NA	119274027	119293302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119278921_119281293_119281409_119291441
ES.36385.13	chr9	+	2557	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	3	11	3	-11	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAAAGACAGCACGCCT	NA	False	NA	NA	False	NA	NA	NA	119274028	119293293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.14	chr9	+	3841	7	NNC	ENSMUSG00000042787.16	novel	2571	7	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.750299758899	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGACCGGTGATTGG	NA	False	NA	NA	False	NA	NA	NA	119274029	119294575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291200_119291239_119291441
ES.36385.15	chr9	+	2522	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	23	1287	6	-8	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAGCACGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	119274031	119293296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.16	chr9	+	2636	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-16	4	-5	-3	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCACGCCTGACTGCAT	NA	False	NA	NA	False	NA	NA	NA	119274036	119293301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.17	chr9	+	4011	9	NNC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.9622157892236	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGACCGGTGATTGGC	NA	False	NA	NA	False	NA	NA	NA	119274037	119294576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119276259_119276326_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.18	chr9	+	5213	6	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	31	junction_2	21.1414285231628	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274037	119293305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119278921_119281293_119281409_119291441
ES.36385.19	chr9	+	1917	5	NIC	ENSMUSG00000042787.16	novel	3832	6	NA	NA	-5	-482	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	33.8996681399686	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGACCCTCTTCTGCTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	119274047	119292822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119291441
ES.36385.2	chr9	+	2082	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	-9	1759	-9	-480	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCTCTTCTGCTCCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	119273999	119292824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.20	chr9	+	4057	1	NIC	ENSMUSG00000042787.16	novel	3832	6	NA	NA	15187	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAGCACGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	119289239	119293296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119289200_119293300
ES.36385.3	chr9	+	3943	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-43	-1276	1	-2	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCGGTGATTGGCCACAG	NA	False	NA	NA	False	NA	NA	NA	119274009	119294581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.4	chr9	+	3464	7	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	7	-480	intron_retention	FALSE	canonical	3	31	junction_2	22.4548930574657	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCTCTTCTGCTCCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	119274015	119292824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119278921_119281293_119281409_119291441
ES.36385.5	chr9	+	3003	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-37	-342	7	342	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGTGTGACTGTCCGT	NA	False	NA	NA	False	AAAACA	-16	NA	119274015	119293647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.6	chr9	+	3852	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	-10	-1271	7	-8	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGACCGGTGATTGG	NA	False	NA	NA	False	NA	NA	NA	119274015	119294575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.7	chr9	+	6204	5	NNC	ENSMUSG00000042787.16	novel	3832	6	NA	NA	8	11937	intron_retention	FALSE	non_canonical	0	0	junction_4	38.4732049613754	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119274016	119306520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119274217_119276014_119276165_119277454_119281409_119291441_119293301_119306479
ES.36385.8	chr9	+	3812	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	15	5	-2	-5	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACCGGTGATTGGCCA	NA	False	NA	NA	False	NA	NA	NA	119274023	119294578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36385.9	chr9	+	2091	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	-1	481	-1	-481	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCCTCTTCTGCTCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	119274024	119292823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ES.36386.1	chr9	-	223	1	Intergenic	novelGene_29602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCACTGAT	NA	False	NA	NA	False	NA	NA	NA	119219273	119219050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119219000_119219300
ES.36387.1	chr9	-	2442	1	Genic_Genomic	ENSMUSG00000111204.2	novel	NA	NA	NA	NA	-2201	-3668	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCACAGAACAAGGGGTG	NA	False	NA	NA	False	NA	NA	NA	119240283	119237841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_119237800_119240300
ES.36387.2	chr9	-	2442	2	NNC	ENSMUSG00000111204.2	novel	397	2	NA	NA	-43208	-3668	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCACAGAACAAGGGGTG	NA	False	NA	NA	False	NA	NA	NA	119281290	119237841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119240264_119281270
ES.36387.3	chr9	-	2107	1	Antisense	novelGene_ENSMUSG00000061393.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAGCATGTTTCATAAAT	NA	False	NA	NA	False	NA	NA	NA	119265908	119263801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_119263800_119265900
ES.36388.1	chr9	-	177	1	Intergenic	novelGene_29603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	119282075	119281898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119281900_119282100
ES.36389.1	chr9	-	2108	1	Intergenic	novelGene_29604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGTGACCTGTCACG	NA	False	NA	NA	False	NA	NA	NA	119297276	119295168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119295200_119297300
ES.3639.1	chr10	+	174	2	Intergenic	novelGene_2781	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATGATCAC	NA	False	NA	NA	False	NA	NA	NA	95261747	95264993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95261756_95264827
ES.36390.1	chr9	-	5753	21	ISM	ENSMUSG00000032511.18	ENSMUST00000117911.8	8453	28	-9	16539	-9	-15625	5prime_fragment	FALSE	canonical	0	0	junction_3	0.9	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGTATGAAAGCACAGT	NA	False	NA	NA	False	AATAAA	-16	NA	119408091	119329014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_119330862_119341206_119341362_119342046_119342168_119344968_119345131_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671_119379801_119381051_119381142_119389327_119389447_119391417_119391745_119407914
ES.36390.2	chr9	-	4829	12	ISM	ENSMUSG00000032511.18	ENSMUST00000117911.8	8453	28	21	47515	21	31612	5prime_fragment	FALSE	canonical	0	0	junction_1	1.08330684434663	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACCTCCTCTGTATGAC	NA	False	NA	NA	False	AATGAA	-22	NA	119408061	119359990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671_119379801_119381051_119381142_119389327_119389447_119391417_119391745_119407914
ES.36390.3	chr9	-	2537	11	NIC	ENSMUSG00000032511.18	novel	8453	28	NA	NA	-4	28775	intron_retention	FALSE	canonical	0	0	junction_1	1.09544511501033	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGGTGGTTTCCTTGCT	NA	False	NA	NA	False	AAGAAA	-17	NA	119408086	119362827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671_119379801_119381051_119381142_119389327_119389447_119391417_119391745_119407914
ES.36391.1	chr9	-	5153	22	NNC	ENSMUSG00000034115.11	novel	5899	27	NA	NA	12493	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.12485826771597	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGTTTCCATTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	119640433	119582824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119584344_119587472_119587744_119588905_119589007_119594493_119594636_119597414_119597469_119598826_119599097_119599480_119599583_119603335_119603510_119607973_119608129_119609845_119609964_119610966_119611081_119612819_119613222_119618973_119619328_119621402_119621580_119623001_119623241_119624723_119624854_119632401_119632576_119633438_119633637_119634724_119634867_119636813_119636988_119640181_119640280_119640388
ES.36391.2	chr9	-	2134	9	NNC	ENSMUSG00000034115.11	novel	5899	27	NA	NA	11760	-40039	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.707106781186548	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTCTGCACAGGTC	NA	False	NA	NA	False	AATAAA	-19	NA	119641166	119622867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119623241_119624723_119624854_119632401_119632576_119633438_119633637_119634724_119634867_119635992_119636060_119636813_119636988_119640181_119640280_119640388
ES.36392.1	chr9	+	3883	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	-35	-3	-35	2	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGCTGGACATGTTTA	NA	False	NA	32	True	AATAAA	-20	NA	119723908	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.10	chr9	+	3795	19	FSM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	-20	1	8	0	multi-exon	FALSE	canonical	0	0	junction_12	68.0088955692063	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119723951	119755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.11	chr9	+	2859	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-8	-552	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	69.7287875000589	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGGTTCATGTTTGT	NA	False	NA	19	True	AGTAAA	-31	NA	119723952	119754752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119753143_119753334_119753774
ES.36392.12	chr9	+	8434	15	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	9	1	-8	-1	intron_retention	FALSE	canonical	3	238	junction_12	22.0232947172779	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723952	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714
ES.36392.13	chr9	+	2876	19	FSM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	-19	919	-8	-570	multi-exon	FALSE	canonical	0	0	junction_12	68.0088955692063	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTTTGATATTTAT	NA	False	NA	1	True	AGTAAA	-13	NA	119723952	119754734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.14	chr9	+	5089	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	235	junction_16	24.3963806947559	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723952	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.15	chr9	+	3902	20	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.9999055652981	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCAGTGTGCTGGAC	NA	False	NA	25	True	AATAAA	-13	NA	119723952	119755648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119727430_119727501_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.16	chr9	+	4075	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-5	-568	intron_retention	FALSE	canonical	3	235	junction_16	24.4360616152938	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTTTGATATTTATAT	NA	False	NA	3	True	AGTAAA	-15	NA	119723955	119754736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.17	chr9	+	4630	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	235	junction_16	23.862930380965	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCAGTGTGCTGGACAT	NA	False	NA	27	True	AATAAA	-15	NA	119723958	119755650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.18	chr9	+	3686	18	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	108.723578900791	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723960	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745860_119746176_119746279_119747527_119747624_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.2	chr9	+	3902	20	NNC	ENSMUSG00000032512.8	novel	3776	19	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.683112375495	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCAGTGTGCTGGA	NA	False	NA	24	True	AATAAA	-12	NA	119723940	119755647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119750243_119750345_119751683_119751761_119753143_119753334_119753774
ES.36392.20	chr9	+	6132	16	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_12	73.3622973104487	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723961	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119742792_119745791_119745900_119746176_119747624_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.22	chr9	+	3843	20	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	1	1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	66.4872886857834	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCCAACTACTGGAGATA	NA	False	NA	NA	False	NA	NA	NA	119723961	119757506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774_119755637_119757474
ES.36392.23	chr9	+	3869	19	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.1271732012643	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119723961	119755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742651_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.24	chr9	+	6601	17	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	2	0	intron_retention	FALSE	canonical	3	235	junction_15	24.5069346053316	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119723962	119755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119751761_119753143_119753334_119753774
ES.36392.25	chr9	+	7851	16	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	3	-3	intron_retention	FALSE	canonical	3	235	junction_14	25.2546145398332	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCAGTGTGCTGGACA	NA	False	NA	26	True	AATAAA	-14	NA	119723963	119755649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119747624_119748714_119751761_119753143_119753334_119753774
ES.36392.26	chr9	+	2818	19	NNC	ENSMUSG00000032512.8	novel	3776	19	NA	NA	3	-556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	90.7862093187569	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATTGTGGTTCATGT	NA	False	NA	15	True	AGTAAA	-27	NA	119723963	119754748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748775_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.28	chr9	+	5958	1	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	3	-3513	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTACTTTTCGTTGT	NA	False	NA	NA	False	TTTAAA	-2	NA	119723963	119729921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724000_119729900
ES.36392.3	chr9	+	3111	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	-3	737	-3	-389	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTACTTTGGATTCTT	NA	False	NA	NA	False	GATAAA	-17	NA	119723940	119754915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.30	chr9	+	3767	20	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	66.4872886857834	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723965	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774_119754469_119754523
ES.36392.31	chr9	+	3805	19	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	67.9326100350402	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCAGTGTGCTGGACA	NA	False	NA	26	True	AATAAA	-14	NA	119723965	119755649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747628_119748733_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.32	chr9	+	2900	19	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	5	-570	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	68.1764232807649	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTTTGATATTTAT	NA	False	NA	1	True	AGTAAA	-13	NA	119723965	119754734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736843_119738410_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.36	chr9	+	3973	19	NIC	ENSMUSG00000032512.8	novel	2924	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	66.449646767726	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119724174	119755652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724383_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.37	chr9	+	3862	19	NNC	ENSMUSG00000032512.8	novel	2924	6	NA	NA	-47	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	86.8723343138413	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCAGTGTGCTGGA	NA	False	NA	24	True	AATAAA	-12	NA	119724175	119755647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724383_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738521_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.38	chr9	+	3044	19	NIC	ENSMUSG00000032512.8	novel	2924	6	NA	NA	-36	-569	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	66.449646767726	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGGTTTGATATTTATA	NA	False	NA	2	True	AGTAAA	-14	NA	119724186	119754735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724383_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.39	chr9	+	2894	14	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	10583	916	-2252	-568	intron_retention	FALSE	canonical	3	235	junction_13	19.35162027068	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTTTGATATTTATAT	NA	False	NA	3	True	AGTAAA	-15	NA	119734526	119754736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143
ES.36392.4	chr9	+	4292	18	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	-1	-5	-1	4	intron_retention	FALSE	canonical	3	235	junction_17	23.4534066552606	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGACATGTTTATT	NA	False	NA	34	True	AATAAA	-22	NA	119723942	119755657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143
ES.36392.40	chr9	+	3273	14	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-29	1854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	74.743268680315	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACTACTGGAGATAT	NA	False	NA	NA	False	NA	NA	NA	119736749	119757507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774_119755651_119757477
ES.36392.41	chr9	+	2640	8	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	21846	2	-1407	-2	3prime_fragment	FALSE	canonical	3	235	junction_6	25.0028569796105	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCAGTGTGCTGGACAT	NA	False	NA	27	True	AATAAA	-15	NA	119745789	119755650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.42	chr9	+	3965	3	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	-643	-553	intron_retention	FALSE	canonical	3	235	junction_1	8	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTGGTTCATGTTTG	NA	False	NA	18	True	AGTAAA	-30	NA	119748962	119754751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119751761_119753143_119753334_119753774
ES.36392.43	chr9	+	3077	1	FSM	ENSMUSG00000032512.8	ENSMUST00000217429.2	3487	1	2069	-1659	1311	-553	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTGGTTCATGTTTG	NA	False	NA	18	True	AGTAAA	-30	NA	119751674	119754751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119751700_119754800
ES.36392.44	chr9	+	1206	1	Antisense	novelGene_ENSMUSG00000032513.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACTACTGGAGATAT	NA	False	NA	NA	False	NA	NA	NA	119756301	119757507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_119756300_119757500
ES.36392.5	chr9	+	2510	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	7	1328	7	-980	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTAAGAGTTATTTTTA	NA	False	NA	NA	False	TATAAA	-20	NA	119723950	119754324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.6	chr9	+	2940	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	7	898	7	-550	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGTTCATGTTTGTTT	NA	False	NA	21	True	AGTAAA	-33	NA	119723950	119754754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.7	chr9	+	5810	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	7	-1	intron_retention	FALSE	canonical	3	235	junction_16	24.4197718972879	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723950	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119751761_119753143_119753334_119753774
ES.36392.8	chr9	+	4995	18	NIC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	7	-1	intron_retention	FALSE	canonical	3	235	junction_16	24.4360616152938	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGCTGGACATG	NA	False	NA	28	True	AATAAA	-16	NA	119723950	119755651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36392.9	chr9	+	3727	19	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	64.7542362406593	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCAGTGTGCTGGA	NA	False	NA	24	True	AATAAA	-12	NA	119723951	119755647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738521_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ES.36393.1	chr9	-	5355	8	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	-2	1272	intron_retention	FALSE	canonical	3	103	junction_4	11.4749060731561	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTCAGTCATTGC	NA	False	NA	NA	False	TATAAA	-18	NA	119766618	119753050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.10	chr9	-	3193	7	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	5	-1331	intron_retention	FALSE	canonical	3	103	junction_3	11.6535640709422	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766626	119755653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.11	chr9	-	2573	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	0	1333	0	-1333	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	-2	True	AATAAA	-17	NA	119766631	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.12	chr9	-	3393	6	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	-1	-1333	intron_retention	FALSE	canonical	3	103	junction_2	12.6269552941317	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	-2	True	AATAAA	-17	NA	119766617	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.13	chr9	-	2990	8	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	1	-1333	intron_retention	FALSE	canonical	3	103	junction_4	11.0509026318936	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	-2	True	AATAAA	-17	NA	119766615	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757103_119757292_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.14	chr9	-	2688	8	NNC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	19	-1333	intron_retention	FALSE	canonical	1	3	junction_3	40.3287510749503	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	-2	True	AATAAA	-17	NA	119766597	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119757446_119757878_119758030_119758616_119758828_119759079_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.15	chr9	-	3175	7	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	27	-1333	intron_retention	FALSE	canonical	3	103	junction_3	11.8696625431766	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGTAACTAAAGCT	NA	False	NA	-2	True	AATAAA	-17	NA	119766589	119755655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757103_119757292_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.16	chr9	-	5472	6	NNC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	18	-1334	intron_retention	FALSE	canonical	1	1	junction_3	46.6416123220456	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTTTGTAACTAAAGC	NA	False	NA	-3	True	AATAAA	-16	NA	119766598	119755656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119758030_119758616_119758828_119759038_119759166_119759285_119761891_119762327_119762409_119766523
ES.36393.17	chr9	-	3734	6	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	30	-1337	intron_retention	FALSE	canonical	3	103	junction_2	12.4032253869709	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGTGTTTGTAACTAA	NA	False	NA	-6	True	AATAAA	-13	NA	119766586	119755659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.18	chr9	-	2522	9	NNC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	21	-1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.1053300697052	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAAGTGTTTGTAACT	NA	False	NA	-8	True	AATAAA	-11	NA	119766595	119755661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762400_119766523
ES.36393.2	chr9	-	5147	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	31	-1272	16	1272	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTCAGTCATTGC	NA	False	NA	NA	False	TATAAA	-18	NA	119766600	119753050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.4	chr9	-	5541	7	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	21	1270	intron_retention	FALSE	canonical	3	103	junction_3	12.1609575646365	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATGTTTTCAGTCATT	NA	False	NA	NA	False	TATAAA	-16	NA	119766595	119753052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757446_119757878_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.5	chr9	-	3865	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	45	-4	30	4	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTTTTTTTTTATAT	NA	False	NA	NA	False	ATTAAA	-23	NA	119766586	119754318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.6	chr9	-	4253	8	NNC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	30	0	intron_retention	FALSE	canonical	1	3	junction_3	41.2651950986617	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAACTTGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	119766586	119754322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119757103_119757292_119758030_119758616_119758828_119759079_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.7	chr9	-	3476	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	14	416	-1	-416	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTGAGATCTTTTTA	NA	False	NA	NA	False	TATAAA	-44	NA	119766617	119754738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.8	chr9	-	2770	8	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	1	-1331	intron_retention	FALSE	canonical	3	103	junction_4	11.7229932793878	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766615	119755653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36393.9	chr9	-	2932	7	NIC	ENSMUSG00000032513.9	novel	3906	9	NA	NA	29	-1331	intron_retention	FALSE	canonical	3	103	junction_3	12.1609575646365	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTAACTAAAGCTTT	NA	False	NA	0	True	AATAAA	-19	NA	119766587	119755653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119757446_119757878_119758030_119758616_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ES.36394.1	chr9	+	2812	10	NNC	ENSMUSG00000032514.12	novel	4041	26	NA	NA	1	-12921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.79161283295523	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATTAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	119766702	119778821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119766817_119768232_119768363_119769481_119769593_119770198_119770366_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119775684_119775878_119777189
ES.36394.2	chr9	+	4131	29	FSM	ENSMUSG00000032514.12	ENSMUST00000035100.6	4182	29	37	14	7	-14	multi-exon	FALSE	canonical	0	0	junction_8	1.4961685761181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTCCCCGTTCAGTGT	NA	False	NA	NA	False	AGTAAA	-27	NA	119766708	119796845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119766817_119768232_119768363_119769481_119769593_119770198_119770366_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119775684_119775878_119779666_119779765_119779885_119780087_119781220_119781351_119783221_119783380_119783599_119783816_119785899_119786139_119787129_119787203_119787303_119787415_119787752_119787892_119788034_119788142_119790820_119791010_119792246_119792358_119793297_119793380_119794762_119794914_119795078_119795241_119795332_119795526_119795620_119795846_119796261_119796383_119796512_119796581_119796662
ES.36394.3	chr9	+	4778	9	ISM	ENSMUSG00000032514.12	ENSMUST00000159128.8	4041	26	8	16638	7	-12261	5prime_fragment	FALSE	canonical	0	0	junction_8	1.72753437013566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGATCATTGTTGTCTT	NA	False	NA	NA	False	TTTAAA	-14	NA	119766708	119779481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119766817_119768232_119768363_119769481_119769593_119770198_119770366_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119775684
ES.36394.4	chr9	+	4117	9	ISM	ENSMUSG00000032514.12	ENSMUST00000159128.8	4041	26	9	17298	8	-12921	5prime_fragment	FALSE	canonical	0	0	junction_8	1.72753437013566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATTAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	119766709	119778821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119766817_119768232_119768363_119769481_119769593_119770198_119770366_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119775684
ES.36394.5	chr9	+	3739	23	NNC	ENSMUSG00000032514.12	novel	4041	26	NA	NA	8	-1355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.61091319515176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTCTTTGTCCTCATC	NA	False	NA	NA	False	NA	NA	NA	119766709	119793880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119766817_119768232_119768363_119769481_119769593_119770198_119770366_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119775684_119775878_119779666_119779765_119779885_119780087_119781220_119781351_119781938_119782001_119783221_119783380_119783599_119783816_119785750_119786139_119787129_119787203_119787303_119787415_119787752_119787892_119788034_119788142_119790820_119791010_119792246_119792358_119793297
ES.36394.6	chr9	+	3491	25	NNC	ENSMUSG00000032514.12	novel	827	5	NA	NA	4785	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.30104124966633	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTCTCCCCGTTCAGT	NA	False	NA	NA	False	AGTAAA	-25	NA	119771486	119796843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119771558_119771637_119771761_119772882_119773041_119774010_119774096_119774548_119774648_119779666_119779765_119779885_119780087_119781220_119781351_119783221_119783380_119783599_119783816_119785899_119786139_119787129_119787203_119787303_119787415_119787752_119787892_119788034_119788142_119790820_119791010_119792246_119792358_119793297_119793380_119794762_119794914_119795078_119795241_119795332_119795526_119795620_119795846_119796261_119796383_119796512_119796581_119796662
ES.36394.7	chr9	+	177	1	Intergenic	novelGene_29605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	119794161	119794338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119794200_119794300
ES.36395.1	chr9	-	2975	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-82	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	2	True	AATAAA	-17	NA	119813806	119800228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
ES.36395.2	chr9	-	3317	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-290	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	8.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTCTTCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	119813135	119800230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119812684
ES.36395.3	chr9	-	3116	5	NNC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-1175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9268604418766	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTCTTCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	119814899	119800230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119814649
ES.36395.4	chr9	-	3135	5	FSM	ENSMUSG00000032515.9	ENSMUST00000035101.9	2906	5	-231	2	-16	0	multi-exon	FALSE	canonical	1	1	junction_4	11.4972822875669	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTCTTCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	119813740	119800230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471
ES.36395.5	chr9	-	2075	5	NIC	ENSMUSG00000032515.9	novel	2906	5	NA	NA	-96	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	4.71036092035419	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGTTTTTCTGTACT	NA	False	NA	NA	False	NA	NA	NA	119813820	119801142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813699
ES.36396.1	chr9	+	167	1	Intergenic	novelGene_29606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAACCTTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	119817830	119817997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119817800_119818000
ES.36397.1	chr9	-	237	1	Intergenic	novelGene_29607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAAAAGAAAATCAATCT	NA	False	NA	NA	False	NA	NA	NA	119832914	119832677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119832700_119832900
ES.36398.1	chr9	-	178	1	Intergenic	novelGene_29608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	119835810	119835632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_119835600_119835800
ES.36399.1	chr9	+	1757	2	NNC	ENSMUSG00000042262.6	novel	1175	2	NA	NA	0	589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119921179	119924561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119921248_119922872
ES.36399.2	chr9	+	2066	2	FSM	ENSMUSG00000111546.2_ENSMUSG00000042262.6	ENSMUST00000048777.4	1175	2	2	-893	2	893	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAGATTTGCATTTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	119921181	119924865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119921255_119922872
ES.364.1	chr1	-	4357	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTACACTATGTACCA	NA	False	NA	NA	False	NA	NA	NA	39999723	39995366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_39995400_39999700
ES.3640.1	chr10	+	1196	3	Antisense	novelGene_ENSMUSG00000112261.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAAAGAGTAGAGTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	95292353	95294683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_95292419_95293392_95294181_95294340
ES.36400.1	chr9	+	1631	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	-3	163	-3	-163	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTCTGTGACAGAACC	1757	False	NA	21	True	AATAAA	-38	NA	119939436	119953407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.10	chr9	+	2918	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-9	775	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAACAGACCATTAATCC	1782	False	NA	NA	False	NA	NA	NA	119939461	119954345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.11	chr9	+	2500	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	38	-747	4	747	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	1798	False	NA	NA	False	NA	NA	NA	119939477	119954317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.12	chr9	+	4339	6	NNC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	6	-179	intron_retention	FALSE	canonical	0	0	junction_2	63.0187273752811	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCACCAGGGTGGAGAC	1800	False	NA	5	True	AATAAA	-30	NA	119939479	119953391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119939639_119945567_119948542_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.14	chr9	+	2980	3	ISM	ENSMUSG00000032519.12	ENSMUST00000135514.2	991	6	3446	-562	3307	562	3prime_fragment	FALSE	canonical	3	158	junction_1	3	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGAACCACATACATAC	9682	False	NA	NA	False	NA	NA	NA	119947361	119951823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_119949503_119949738_119949914_119951159
ES.36400.15	chr9	+	1679	1	Genic_Genomic	ENSMUSG00000032519.12	novel	NA	NA	NA	NA	9425	1588	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTTTTAAAATGTGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	119953479	119955158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_119953500_119955200
ES.36400.3	chr9	+	1786	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	7	-2	7	2	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACTCTGATTGACAGC	1767	False	NA	NA	False	ATTAAA	-18	NA	119939446	119953572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.4	chr9	+	1663	6	NIC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	61.2359371611148	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACTCTGATTGACAGC	1768	False	NA	NA	False	ATTAAA	-18	NA	119939447	119953572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939639_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.5	chr9	+	4314	6	NIC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	9	-187	intron_retention	FALSE	canonical	3	152	junction_2	4.4	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1769	False	NA	-3	True	AATAAA	-22	NA	119939448	119953383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939639_119945567_119945690_119946518_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.6	chr9	+	3513	1	NIC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	11	2300	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCAGAATG	1771	False	NA	NA	False	NA	NA	NA	119939450	119942963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939400_119943000
ES.36400.7	chr9	+	1961	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-14	-187	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1777	False	NA	-3	True	AATAAA	-22	NA	119939456	119953383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.8	chr9	+	1709	8	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-13	-187	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	64.126469430592	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1778	False	NA	-3	True	AATAAA	-22	NA	119939457	119953383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949072_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36400.9	chr9	+	1723	8	NNC	ENSMUSG00000032519.12	novel	961	8	NA	NA	-9	-187	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	65.5186528978658	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGACATCACCAGG	1782	False	NA	-3	True	AATAAA	-22	NA	119939461	119953383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948930_119949072_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ES.36401.1	chr9	+	1271	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	-91	758	-91	52	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCATGGTCCTACTGAC	NA	False	NA	57	True	NA	NA	NA	119956663	119960677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.10	chr9	+	1014	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1923.12694588787	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAGACTGTACCTGGAT	NA	False	NA	18	True	AATAAA	-28	NA	119956854	119960638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959400_119959830_119959963_119960065_119960232_119960465
ES.36401.14	chr9	+	997	7	NNC	ENSMUSG00000032518.7	novel	1101	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1987.53948947492	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTCTTATGGTCCT	NA	False	NA	-3	True	AATAAA	-7	NA	119956868	119960617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119956897_119957522_119957689_119958223_119958330_119959179_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.16	chr9	+	2164	5	NIC	ENSMUSG00000032518.7	novel	1599	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	2998	junction_1	1134.17481015935	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956879	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.17	chr9	+	1469	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2026.36247717157	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGGTCCTCACTGCA	NA	False	NA	4	True	AATAAA	-14	NA	119956890	119960624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119957375_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.18	chr9	+	3016	2	NIC	ENSMUSG00000032518.7	novel	1599	6	NA	NA	466	0	intron_retention	FALSE	canonical	3	5877	junction_1	0	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119957375	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119960232_119960465
ES.36401.19	chr9	+	983	6	NNC	ENSMUSG00000032518.7	novel	1599	6	NA	NA	-350	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2170.60664331426	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119957521	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119957689_119958223_119958343_119959187_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.20	chr9	+	1292	6	FSM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	650	-343	-312	343	multi-exon	FALSE	canonical	3	2998	junction_2	1090.74407630755	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTTGGTGAGACTGAT	NA	False	NA	2	True	AAAAAG	-3	NA	119957559	119960968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.21	chr9	+	1649	4	NIC	ENSMUSG00000032518.7	novel	1599	6	NA	NA	377	13	intron_retention	FALSE	canonical	3	5375	junction_1	214.17905281952	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAGACTGTACCTGGAT	NA	False	NA	18	True	AATAAA	-28	NA	119958248	119960638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.22	chr9	+	161	1	NIC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	1281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	779	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119960464	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_119960500_119960600
ES.36401.5	chr9	+	1060	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2028.1482249141	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119956897_119957522_119957689_119958193_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ES.36401.6	chr9	+	1103	7	FSM	ENSMUSG00000032518.7	ENSMUST00000217356.2	1101	7	-2	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_3	1986.85748524313	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956852	119960625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959110_119959430_119959833_119959963_119960065_119960232_119960465
ES.36402.1	chr9	+	202	1	Intergenic	novelGene_29609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCAAAAGCTATGAAA	NA	False	NA	NA	False	TTTAAA	-7	NA	119970857	119971059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_119970900_119971100
ES.36403.1	chr9	+	2479	6	FSM	ENSMUSG00000032517.17	ENSMUST00000174193.8	2609	6	-32	162	3	-162	multi-exon	FALSE	canonical	2	7	junction_4	5.38144961882948	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTATCTGGAGATTGCT	NA	False	NA	14	True	AATAAA	-16	NA	119978775	120010388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002442_120008392_120008472_120008590
ES.36403.2	chr9	+	994	3	FSM	ENSMUSG00000032517.17	ENSMUST00000215512.2	498	3	25	-521	0	521	multi-exon	FALSE	canonical	3	18	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACCTGGCGTGGCTTCT	NA	False	NA	3	True	NA	NA	NA	119978807	119997725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119978864_119983752_119983832_119996866
ES.36403.3	chr9	+	1497	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	36	3	1	-3	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGGTGGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	119978808	119998441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
ES.36403.4	chr9	+	1473	6	FSM	ENSMUSG00000032517.17	ENSMUST00000174193.8	2609	6	2	1134	2	683	multi-exon	FALSE	canonical	2	7	junction_4	5.38144961882948	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATATTTGTTTTGAAT	NA	False	NA	NA	False	CATAAA	-11	NA	119978809	120009416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002442_120008392_120008472_120008590
ES.36403.5	chr9	+	780	4	FSM	ENSMUSG00000032517.17	ENSMUST00000068698.15	1536	4	37	719	2	521	multi-exon	FALSE	canonical	3	15	junction_3	2.44948974278318	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACCTGGCGTGGCTTCT	NA	False	NA	3	True	NA	NA	NA	119978809	119997725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288
ES.36403.6	chr9	+	3170	5	NNC	ENSMUSG00000032517.17	novel	3286	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.07774721070176	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGTTTATTTGCTTT	NA	False	NA	14	True	NA	NA	NA	119978809	120005157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002431_120002544
ES.36403.7	chr9	+	2786	7	NNC	ENSMUSG00000032517.17	novel	2609	6	NA	NA	6	-159	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	6.58280588604383	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTGGAGATTGCTTGA	NA	False	NA	17	True	AATAAA	-19	NA	119978813	120010391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_119978864_119983752_119983832_119996866_119997077_119997288_119997631_120002216_120002442_120008392_120008472_120008590
ES.36403.8	chr9	+	4920	4	NNC	ENSMUSG00000032517.17	novel	569	3	NA	NA	-2732	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTGGAGATTGCTTGA	NA	False	NA	17	True	AATAAA	-19	NA	119999362	120010391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120002442_120008392_120008472_120008590_120010110_120010148
ES.36404.1	chr9	+	4837	1	Intergenic	novelGene_29610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTGTGACTCTAGAG	992	False	NA	NA	False	NA	NA	NA	120095923	120100760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_120095900_120100800
ES.36405.1	chr9	+	1745	1	NIC	ENSMUSG00000111360.2	novel	1512	3	NA	NA	41929	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTACCTCCATGCACTA	NA	False	NA	NA	False	AATAAA	-15	NA	120107635	120109380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120107600_120109400
ES.36406.1	chr9	+	2731	11	NNC	ENSMUSG00000041794.14	novel	4906	17	NA	NA	-125	1314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.748331477354788	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTGTCATAATATA	1719	False	NA	NA	False	NA	NA	NA	120132876	120263331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120133267_120164663_120164807_120217177_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418_120262045_120262679
ES.36406.2	chr9	+	5008	17	FSM	ENSMUSG00000041794.14	ENSMUST00000048121.13	4906	17	-102	0	-102	0	multi-exon	FALSE	canonical	0	0	junction_1	0.70433922934904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGTACGTGGTGTTT	1742	False	NA	NA	False	AGTAAA	-18	NA	120132899	120303907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120133267_120164663_120164807_120217177_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418_120262045_120270407_120270648_120282592_120282788_120290473_120290636_120293759_120293865_120293966_120294028_120296511_120296631_120301837
ES.36407.1	chr9	-	177	1	Intergenic	novelGene_29611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	120289009	120288832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120288800_120289000
ES.36408.1	chr9	+	1065	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	-27	-3	-27	3	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATGCACTTTGTTTTCT	NA	False	NA	37	True	AATAAA	-39	NA	120321529	120324399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ES.36408.2	chr9	+	1293	3	NIC	ENSMUSG00000006941.6	novel	1035	4	NA	NA	-13	-19	intron_retention	FALSE	canonical	3	438	junction_1	17.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGAGCGCTGACCTAAG	NA	False	NA	15	True	AATAAA	-17	NA	120321543	120324377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120321908_120323172_120323703_120323978
ES.36408.3	chr9	+	827	5	NNC	ENSMUSG00000006941.6	novel	1035	4	NA	NA	-9	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.664420276691	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAAAAAGAAAGTGTG	NA	False	NA	-10	True	ATTAAA	-19	NA	120321547	120324352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120321633_120321805_120321908_120323172_120323337_120323600_120323703_120323978
ES.36408.4	chr9	+	851	4	NNC	ENSMUSG00000006941.6	novel	1035	4	NA	NA	135	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	208.69328903654	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCAGCAATGCACTTT	NA	False	NA	30	True	AATAAA	-32	NA	120321691	120324392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120321908_120323217_120323337_120323600_120323703_120323978
ES.36409.1	chr9	-	216	1	Intergenic	novelGene_29612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGTGGCAGGACTCGA	NA	False	NA	NA	False	NA	NA	NA	120337824	120337608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120337600_120337800
ES.3641.1	chr10	-	2706	3	NNC	ENSMUSG00000020027.19	novel	479	2	NA	NA	10	24187	intron_retention	FALSE	canonical	0	0	junction_1	223.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGATATTCTTCTATAG	NA	False	NA	NA	False	AATAAA	-21	NA	95252709	95197036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95199152_95250692_95251054_95252479
ES.3641.10	chr10	-	4597	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	5	733	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCCAGAGGAGATTG	NA	False	NA	NA	False	NA	NA	NA	95252714	95220490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.11	chr10	-	4997	6	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	54	730	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	212.826126215744	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGACTGGCCAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	95252665	95220493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95248520_95248973_95250692_95251054_95252479
ES.3641.12	chr10	-	2894	6	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	8	886	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	212.826126215744	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTAAATGTTGCTCAC	NA	False	NA	NA	False	NA	NA	NA	95252711	95222642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95248520_95248973_95250692_95251054_95252479
ES.3641.13	chr10	-	2360	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	38	834	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTCGCCCAATTAATG	NA	False	NA	NA	False	NA	NA	NA	95252681	95222694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.14	chr10	-	1868	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	-26	305	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	21.2779228309532	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGATGGAGCCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	95252100	95223223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95251861
ES.3641.15	chr10	-	2834	7	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	4	299	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	210.418630353873	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGCTGGGATGGAGCC	NA	False	NA	NA	False	NA	NA	NA	95252715	95223229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95228275_95228799_95248520_95248973_95250692_95251054_95252479
ES.3641.16	chr10	-	1686	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	30	152	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGGGCTGTGATGCCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	95252689	95223376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.17	chr10	-	1489	5	NNC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	16.5151445649137	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCCAGTGATCTGCAT	NA	False	NA	NA	False	TTTAAA	-6	NA	95253168	95223528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95253003
ES.3641.18	chr10	-	1497	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	58	-9	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATTCAATATGCCAGT	NA	False	NA	NA	False	NA	NA	NA	95252661	95223537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.19	chr10	-	1896	3	NIC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-189	-118	intron_retention	FALSE	canonical	0	0	junction_1	247	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAAAATTGGATTTCGG	NA	False	NA	NA	False	NA	NA	NA	95250878	95223646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224905_95248520_95248973_95250692
ES.3641.2	chr10	-	3113	6	NNC	ENSMUSG00000020027.19	novel	479	2	NA	NA	2	24180	intron_retention	FALSE	canonical	0	0	junction_1	172.853001131019	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCCATTGATATTCT	NA	False	NA	NA	False	AATAAA	-14	NA	95252717	95197043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95199152_95203559_95203732_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.20	chr10	-	2436	3	FSM	ENSMUSG00000020027.19	ENSMUST00000130784.8	3285	3	709	140	709	-140	multi-exon	FALSE	canonical	3	44	junction_2	8	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4587	False	NA	NA	False	NA	NA	NA	95228120	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95224258_95224751_95224905_95226426
ES.3641.22	chr10	-	1553	6	NNC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	194	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	188.205844755151	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95250951	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95224258_95224751_95224905_95226426_95226508_95246513_95246598_95248585_95248973_95250692
ES.3641.23	chr10	-	1932	7	NNC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	50	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	210.553569325138	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252669	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95224258_95224751_95224905_95226426_95226508_95246511_95246618_95248520_95248973_95250692_95251054_95252479
ES.3641.24	chr10	-	2347	7	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	52	-140	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	210.418630353873	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252667	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95228275_95228799_95248520_95248973_95250692_95251054_95252479
ES.3641.25	chr10	-	1423	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	1	-140	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252718	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.26	chr10	-	2351	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	19	-140	intron_retention	FALSE	canonical	2	11	junction_2	222.428640242213	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252700	95223668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224905_95226426_95226508_95248520_95248973_95250692_95251054_95252479
ES.3641.27	chr10	-	1902	7	NNC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	54	-144	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	210.277924555945	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95252665	95223672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95224258_95224751_95224905_95226426_95226508_95246513_95246598_95248520_95248973_95250692_95251054_95252479
ES.3641.28	chr10	-	165	1	Intergenic	novelGene_2780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTATAA	6717	False	NA	NA	False	NA	NA	NA	95225990	95225825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95225800_95226000
ES.3641.29	chr10	-	726	3	NIC	ENSMUSG00000020027.19	novel	479	2	NA	NA	51	-2116	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	212.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATAAAGTATCTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	95252668	95226331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95226508_95250692_95251054_95252479
ES.3641.3	chr10	-	4769	1	Antisense	novelGene_ENSMUSG00000100550.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCAGCTGCAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	95203198	95198429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_95198400_95203200
ES.3641.30	chr10	-	3346	1	Genic_Genomic	ENSMUSG00000020027.19	novel	NA	NA	NA	NA	8989	936	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCTGTGTTGTTTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	95239607	95236261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_95236300_95239600
ES.3641.31	chr10	-	819	3	NIC	ENSMUSG00000020027.19	novel	893	3	NA	NA	52	1004	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	223.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGCCTCTGACTCAA	NA	False	NA	NA	False	NA	NA	NA	95252667	95246347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95246618_95250692_95251054_95252479
ES.3641.32	chr10	-	2431	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	-215	6	108	-6	multi-exon	FALSE	canonical	3	447	junction_2	23.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTACTTTGAGTTGTA	NA	False	NA	-4	True	AATAAA	-26	NA	95252934	95247357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95252479
ES.3641.33	chr10	-	2278	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	-96	13	-96	-13	multi-exon	FALSE	canonical	1	4	junction_2	245	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCACTCATTACTTTG	NA	False	NA	-11	True	AATAAA	-19	NA	95252170	95247364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95251861
ES.3641.34	chr10	-	3852	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	-1792	-1112	105	-14	multi-exon	FALSE	canonical	3	494	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95252937	95247365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692
ES.3641.35	chr10	-	4005	1	NIC	ENSMUSG00000020027.19	novel	2195	3	NA	NA	-24	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTCATTACTTT	NA	False	NA	-12	True	AATAAA	-18	NA	95251370	95247365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95247400_95251400
ES.3641.36	chr10	-	2159	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	-21	15	-21	-15	multi-exon	FALSE	canonical	3	27	junction_2	233.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95251367	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95251175
ES.3641.37	chr10	-	3400	3	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	126	-15	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	245.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95252916	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95248973_95250692_95251054_95251483
ES.3641.38	chr10	-	2006	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-283	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	247	395	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95253325	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95253286
ES.3641.39	chr10	-	3882	2	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	45	-15	intron_retention	FALSE	canonical	3	447	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95252674	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95251054_95252479
ES.3641.4	chr10	-	3022	4	NNC	ENSMUSG00000020027.19	novel	352	4	NA	NA	161	19380	intron_retention	TRUE	non_canonical	0	0	junction_1	25.3683967872539	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCATCTCTCTGGGGC	4039	False	NA	NA	False	NA	NA	NA	95228668	95201843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95201854_95223640_95224258_95224751_95224905_95226426
ES.3641.40	chr10	-	2132	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-126	-15	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	237	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95253168	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95253003
ES.3641.41	chr10	-	1999	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-56	-15	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	243.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGCACTCATTACTT	NA	False	NA	-13	True	AATAAA	-17	NA	95251402	95247366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95251370
ES.3641.42	chr10	-	3443	2	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	-14	417	intron_retention	FALSE	canonical	3	447	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATCACCATGAGATCC	NA	False	NA	NA	False	NA	NA	NA	95252733	95247864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95251054_95252479
ES.3641.43	chr10	-	1721	5	Fusion	ENSMUSG00000112261.2_ENSMUSG00000020027.19	novel	2153	3	NA	NA	28	417	multi-exon	FALSE	canonical	0	0	junction_2	211.801056418517	479	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATCACCATGAGATCC	1581	False	NA	NA	False	NA	NA	NA	95297058	95247864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_95248973_95250692_95251054_95266279_95266373_95296475_95296557_95296980
ES.3641.45	chr10	-	3340	2	FSM	ENSMUSG00000020027.19	ENSMUST00000119917.2	948	2	-1779	-613	118	417	multi-exon	FALSE	canonical	3	494	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATCACCATGAGATCC	NA	False	NA	NA	False	NA	NA	NA	95252924	95247864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692
ES.3641.46	chr10	-	1922	6	Fusion	ENSMUSG00000112261.2_ENSMUSG00000020027.19	novel	2153	3	NA	NA	26	417	multi-exon	FALSE	canonical	0	0	junction_2	195.838300646222	479	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATCACCATGAGATCC	1579	False	NA	NA	False	NA	NA	NA	95297060	95247864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_95248973_95250692_95251054_95266279_95266373_95272707_95272876_95296475_95296588_95296980
ES.3641.47	chr10	-	2714	3	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	-17	409	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	245.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95252736	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95248973_95250692_95251054_95251483
ES.3641.48	chr10	-	1737	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	-63	521	-63	409	multi-exon	FALSE	canonical	1	4	junction_2	245	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95252137	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95251861
ES.3641.49	chr10	-	1654	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	-22	521	-22	409	multi-exon	FALSE	canonical	3	27	junction_2	233.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95251368	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95251175
ES.3641.5	chr10	-	7676	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	54	3861	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTTGATCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	95252665	95217362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.50	chr10	-	4845	1	NIC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	2	409	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95252717	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95247900_95252700
ES.3641.51	chr10	-	1604	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-104	409	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	237	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95253146	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95253003
ES.3641.52	chr10	-	1654	4	Fusion	ENSMUSG00000112261.2_ENSMUSG00000020027.19	novel	2153	3	NA	NA	25	409	multi-exon	FALSE	canonical	1	3	junction_2	227.782059580351	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	1578	False	NA	NA	False	NA	NA	NA	95297061	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_95248973_95250692_95251054_95296475_95296588_95296980
ES.3641.53	chr10	-	1673	4	NNC	ENSMUSG00000020027.19	novel	2222	3	NA	NA	-77	409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	222.624247456461	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAAAAAAGAACCATCACCA	NA	False	NA	NA	False	NA	NA	NA	95253119	95247872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95252479_95252576_95253003
ES.3641.54	chr10	-	1450	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-21	379	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	246.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95251367	95247902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95251348
ES.3641.55	chr10	-	1457	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-53	376	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	243.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95251399	95247905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95248973_95250692_95251054_95251370
ES.3641.56	chr10	-	1056	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	4	1162	4	-36	multi-exon	FALSE	canonical	3	447	junction_2	23.5	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTCTCTCTTTTTCGT	NA	False	NA	NA	False	TATAAA	-14	NA	95252715	95248513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95248973_95250692_95251054_95252479
ES.3641.57	chr10	-	3112	1	Intergenic	novelGene_2782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCTACTTTA	NA	False	NA	NA	False	NA	NA	NA	95279594	95276482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95276500_95279600
ES.3641.58	chr10	-	2376	4	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	10	2224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.6714276000077	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGCTGTGTCTCAAAGT	1563	False	NA	NA	False	NA	NA	NA	95297076	95278953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95279509_95280006_95281620_95296475_95296588_95296980
ES.3641.59	chr10	-	2826	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	25	-2191	25	2191	multi-exon	FALSE	canonical	3	19	junction_2	4.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTTCCTAATTAGAATC	1578	False	NA	NA	False	ATTAAA	-13	NA	95297061	95278986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95281620_95296475_95296588_95296980
ES.3641.6	chr10	-	5470	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	31	1701	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	14.972892172189	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATAGCACATATTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	95251315	95219522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95251175
ES.3641.60	chr10	-	2234	3	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	10	1615	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	7.5	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTAGAAGCACTGGGG	1563	False	NA	NA	False	NA	NA	NA	95297076	95279562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95281620_95296475_95296557_95296980
ES.3641.61	chr10	-	2142	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7784	1587	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAAAATAAA	9337	False	NA	NA	False	NA	NA	NA	95289302	95279590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95281620_95289189
ES.3641.62	chr10	-	1648	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7784	1093	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCCATTAGTCCCAGG	9337	False	NA	NA	False	AAAACA	-30	NA	95289302	95280084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95281620_95289189
ES.3641.63	chr10	-	1287	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	46	-673	46	673	multi-exon	FALSE	canonical	3	19	junction_2	4.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACACTCCTTATAAAGG	1599	False	NA	NA	False	AATGAA	-8	NA	95297040	95280504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95281620_95296475_95296588_95296980
ES.3641.64	chr10	-	4059	2	ISM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	16	11441	16	-11441	5prime_fragment	FALSE	canonical	3	19	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAATTATTCTTAATAT	1569	False	NA	NA	False	NA	NA	NA	95297070	95292618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95296588_95296980
ES.3641.65	chr10	-	4441	1	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	25	-11443	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTAATTATTCTTAAT	1578	False	NA	NA	False	NA	NA	NA	95297061	95292620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95292600_95297100
ES.3641.66	chr10	-	156	1	Intergenic	novelGene_2783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	5652	False	NA	NA	False	NA	NA	NA	95292987	95292831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95292800_95293000
ES.3641.67	chr10	-	4390	1	Genic_Genomic	ENSMUSG00000112261.2	novel	NA	NA	NA	NA	-1589	-13108	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAGATAAAATGCTATG	NA	False	NA	NA	False	NA	NA	NA	95298675	95294285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_95294300_95298700
ES.3641.68	chr10	-	2342	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	25	-13118	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAACAAGAAGATA	1578	False	NA	NA	False	NA	NA	NA	95297061	95294295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95296557_95296980
ES.3641.69	chr10	-	1969	2	ISM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	17	13530	17	-13530	5prime_fragment	FALSE	canonical	3	19	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGACTCTACTCTTTG	1570	False	NA	NA	False	AATAAA	-20	NA	95297069	95294707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95296588_95296980
ES.3641.7	chr10	-	5841	4	NIC	ENSMUSG00000020027.19	novel	352	4	NA	NA	-19	1459	intron_retention	FALSE	canonical	3	22	junction_2	195.368028773048	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGCCGTCTTTTTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	95252738	95219764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224905_95226426_95226508_95250692_95251054_95252479
ES.3641.70	chr10	-	2326	1	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	46	-13537	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTGCTGAAGACTCTA	1599	False	NA	NA	False	AATAAA	-13	NA	95297040	95294714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95294700_95297000
ES.3641.71	chr10	-	1407	3	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	46	-13539	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCTTGCTGAAGACTC	1599	False	NA	NA	False	AATAAA	-11	NA	95297040	95294716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95295983_95296475_95296557_95296980
ES.3641.72	chr10	-	1416	1	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	25	-14468	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTACTTGTATATGTATC	1578	False	NA	NA	False	NA	NA	NA	95297061	95295645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95295600_95297100
ES.3641.9	chr10	-	5326	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	2	1459	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGCCGTCTTTTTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	95252717	95219764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
ES.36410.1	chr9	+	164	1	Intergenic	novelGene_29613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAAAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	120346292	120346456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_120346300_120346500
ES.36411.1	chr9	+	166	1	Intergenic	novelGene_29614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	120349208	120349374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_120349200_120349400
ES.36412.1	chr9	+	3542	11	FSM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	-599	510	-599	-510	multi-exon	FALSE	canonical	3	4	junction_7	3.21869538788622	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCGTGTATTTGTTAACT	NA	False	NA	15	True	AATAAA	-17	NA	120368284	120396883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120386457_120386618_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
ES.36412.3	chr9	+	2742	10	NIC	ENSMUSG00000041608.9	novel	3453	11	NA	NA	40	-511	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	4.371625682868	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCGTGTATTTGTTAAC	NA	False	NA	14	True	AATAAA	-16	NA	120368923	120396882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
ES.36412.4	chr9	+	1811	3	ISM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	21055	508	2839	-508	3prime_fragment	FALSE	canonical	3	12	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTGTATTTGTTAACTTA	5085	False	NA	17	True	AATAAA	-19	NA	120389938	120396885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120390098_120390964_120391103_120395371
ES.36413.1	chr9	-	6143	1	Antisense	novelGene_ENSMUSG00000041608.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAGTGGTTTGCTTAA	NA	False	NA	NA	False	TATAAA	-17	NA	120400466	120394323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_120394300_120400500
ES.36414.1	chr9	+	799	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	-5	215	-5	4	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGGACTCTAAGCTTG	NA	False	NA	23	True	AATAAA	-27	NA	120400504	120403505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.10	chr9	+	710	6	NNC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6544.36268554853	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTCATGTGTGGACT	NA	False	NA	14	True	AATAAA	-18	NA	120400580	120403496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120400612_120401169_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.12	chr9	+	2644	2	FSM	ENSMUSG00000025794.10	ENSMUST00000215063.2	570	2	-2074	0	1	0	multi-exon	FALSE	canonical	3	15430	junction_1	0	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400580	120403501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120402884_120403160
ES.36414.13	chr9	+	938	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	73	-2	3	2	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATAGTCGAGTATAATT	NA	False	NA	28	True	AATAAA	-37	NA	120400582	120403722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.14	chr9	+	1515	4	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	10044	junction_1	3251.09031283694	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400582	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120400608_120401161_120401264_120401833_120402884_120403160
ES.36414.15	chr9	+	619	5	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	573	junction_2	5946.15987423816	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400582	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120400608_120401161_120401264_120402641_120402742_120402829_120402884_120403160
ES.36414.16	chr9	+	673	5	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7059.62040410106	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCTCATGTGTGGACTC	NA	False	NA	15	True	AATAAA	-19	NA	120400582	120403497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402756_120403160
ES.36414.17	chr9	+	650	6	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6546.75745694004	1348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400582	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402694_120402845_120402884_120403160
ES.36414.18	chr9	+	1088	6	NIC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	6530.14012100812	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400584	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120400984_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.2	chr9	+	845	5	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	30	0	intron_retention	FALSE	canonical	3	10044	junction_1	2963.91573766867	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400539	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402884_120403160
ES.36414.21	chr9	+	1535	4	ISM	ENSMUSG00000025794.10	ENSMUST00000213310.2	1271	5	13	0	13	0	intron_retention	FALSE	canonical	3	14823	junction_3	1227.918564075	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400592	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120401264_120401833_120401929_120402641_120402742_120402829
ES.36414.22	chr9	+	2316	2	ISM	ENSMUSG00000025794.10	ENSMUST00000213310.2	1271	5	31	2	-11	-2	intron_retention	FALSE	canonical	3	17817	junction_1	0	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTCATGTGTGGACT	NA	False	NA	14	True	AATAAA	-18	NA	120400610	120403496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120401264_120401833
ES.36414.23	chr9	+	1552	4	NIC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	-11	2	intron_retention	FALSE	canonical	3	15430	junction_3	974.827278148402	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATAGTCGAGTATAATT	NA	False	NA	28	True	AATAAA	-37	NA	120400610	120403722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120401264_120401833_120401929_120402641_120402884_120403160
ES.36414.24	chr9	+	672	5	NNC	ENSMUSG00000025794.10	novel	570	2	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6787.17667738214	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120401400	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120401486_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.25	chr9	+	3077	1	Genic_Genomic	ENSMUSG00000025794.10	novel	NA	NA	NA	NA	-320	1691	mono-exon	FALSE	NA	NA	NA	NA	NA	1348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTATAGCCCTTGC	417	False	NA	NA	False	NA	NA	NA	120402334	120405411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_120402300_120405400
ES.36414.3	chr9	+	1295	5	FSM	ENSMUSG00000025794.10	ENSMUST00000213310.2	1271	5	-24	0	-24	0	multi-exon	FALSE	canonical	3	14823	junction_3	1143.83114466253	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400555	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.4	chr9	+	685	6	NNC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6544.36268554853	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTCATGTGTGGACT	NA	False	NA	14	True	AATAAA	-18	NA	120400571	120403496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120400618_120401209_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ES.36414.7	chr9	+	2918	1	NIC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400580	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120400600_120403500
ES.36414.8	chr9	+	2069	3	NIC	ENSMUSG00000025794.10	novel	1271	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	15430	junction_2	1193.5	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTCATGTGTGGACT	NA	False	NA	14	True	AATAAA	-18	NA	120400580	120403496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120401264_120401833_120402884_120403160
ES.36414.9	chr9	+	682	5	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7059.62040410106	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGTGTGGACTCT	NA	False	NA	16	True	AATAAA	-20	NA	120400580	120403498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402762_120403160
ES.36415.1	chr9	-	178	1	Intergenic	novelGene_29615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120451260	120451082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120451100_120451300
ES.36416.1	chr9	+	3216	3	Intergenic	novelGene_29616	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTCCTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	120458939	120470851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_120459136_120460561_120463042_120470311
ES.36417.1	chr9	-	4540	1	Antisense	novelGene_ENSMUSG00000111533.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGCCAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	120504044	120499504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_120499500_120504000
ES.36418.1	chr9	-	2032	1	Antisense	novelGene_ENSMUSG00000111533.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTATAGACTGTACTC	NA	False	NA	NA	False	AAAAAG	-11	NA	120509531	120507499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_120507500_120509500
ES.36419.1	chr9	-	176	1	Intergenic	novelGene_29617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGGAGTGAACATGGAC	NA	False	NA	NA	False	NA	NA	NA	120513136	120512960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120513000_120513100
ES.3642.1	chr10	+	1360	1	Antisense	novelGene_ENSMUSG00000062981.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9999	False	NA	NA	False	NA	NA	NA	95329295	95330655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_95329300_95330700
ES.36420.1	chr9	-	178	1	Intergenic	novelGene_29618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAGGATTTGAG	NA	False	NA	NA	False	NA	NA	NA	120528822	120528644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120528600_120528800
ES.36421.1	chr9	-	2401	1	Intergenic	novelGene_29619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGGCGGGAAAACTGC	NA	False	NA	NA	False	NA	NA	NA	120552519	120550118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120550100_120552500
ES.36422.1	chr9	-	1808	2	FSM	ENSMUSG00000111831.2	ENSMUST00000215385.2	790	2	509	-1527	509	1527	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATGCTTTTATCAGCGT	NA	False	NA	NA	False	NA	NA	NA	120579700	120571128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_120572855_120579618
ES.36423.1	chr9	+	1962	1	Antisense	novelGene_ENSMUSG00000111831.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGATGGTGCCT	8327	False	NA	NA	False	NA	NA	NA	120579837	120581799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_120579800_120581800
ES.36424.1	chr9	-	518	1	Intergenic	novelGene_29620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAATGAAAGCAACGGCG	NA	False	NA	NA	False	AATAAA	-44	NA	120594503	120593985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120594000_120594500
ES.36425.1	chr9	-	1277	2	ISM	ENSMUSG00000100146.2	ENSMUST00000188320.2	644	3	97	14	97	-14	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAGAGAGTATTGAA	NA	False	NA	NA	False	NA	NA	NA	120744221	120742853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_120743157_120743247
ES.36426.1	chr9	+	3815	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-184	-8	-184	8	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTTGTTTGTCGTGA	NA	False	NA	35	True	ATTAAA	-24	NA	120762281	120789581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.10	chr9	+	2835	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	59	729	-16	-2	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGCTGTAGTGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	120762524	120788844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.11	chr9	+	3703	16	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.616700980756	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762528	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120772598_120772742_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.12	chr9	+	3840	14	NIC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	540	junction_3	68.8427588333514	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTGTGTCATTTTGT	NA	False	NA	22	True	ATTAAA	-11	NA	120762531	120789568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120762705_120779238_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.13	chr9	+	3308	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	73	242	-2	-241	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGATTAGTTTCCTTTTTA	NA	False	NA	NA	False	TATAAA	-18	NA	120762538	120789331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.14	chr9	+	3593	15	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	171.624055209433	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTGTGTCATTTTGTT	NA	False	NA	23	True	ATTAAA	-12	NA	120762539	120789569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788326
ES.36426.15	chr9	+	3028	16	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	169.787789117278	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762553	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788580_120789083
ES.36426.16	chr9	+	2938	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	88	597	2	130	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGCTTTTTGTTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	120762553	120788976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.17	chr9	+	4615	14	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-28	0	intron_retention	FALSE	non_canonical	0	0	junction_12	172.49594798431	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762609	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120786293_120786582_120786734_120786824_120786947_120787655_120787719_120788374
ES.36426.2	chr9	+	3666	15	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-48	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.534984012432	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGTTTGTTTGTCGT	NA	False	NA	33	True	ATTAAA	-22	NA	120762417	120789579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779238_120779300_120779587_120779805_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.20	chr9	+	3600	15	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	170.049332577944	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762811	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.21	chr9	+	4178	14	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	3	-2	intron_retention	FALSE	canonical	3	24	junction_1	172.220788524498	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762886	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657
ES.36426.22	chr9	+	3095	16	NNC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	22	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	218.789904296844	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762905	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789003
ES.36426.23	chr9	+	3483	15	NNC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	153	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.66677638794	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120763036	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120763139_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.24	chr9	+	11574	12	NIC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-7294	0	intron_retention	FALSE	canonical	3	540	junction_2	66.9266281364825	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120771992	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657
ES.36426.25	chr9	+	4636	14	ISM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	15521	0	-1300	0	3prime_fragment	FALSE	canonical	3	499	junction_1	74.8197834800396	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120777986	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.26	chr9	+	3107	11	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	-121	-4	intron_retention	FALSE	canonical	3	540	junction_1	69.0871912875317	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTGTGTCATTTTGT	NA	False	NA	22	True	ATTAAA	-11	NA	120780033	120789568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786947_120787657_120787719_120788374
ES.36426.27	chr9	+	2637	10	ISM	ENSMUSG00000006932.18	ENSMUST00000163844.8	2222	14	1327	-987	459	-2	3prime_fragment	FALSE	canonical	3	564	junction_1	58.9232604094847	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120780613	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.28	chr9	+	2399	9	ISM	ENSMUSG00000006932.18	ENSMUST00000163844.8	2222	14	2636	-987	1768	-2	3prime_fragment	FALSE	canonical	3	577	junction_1	51.550945675128	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120781922	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.29	chr9	+	2160	7	NNC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	258.118459023931	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCATTTTGTTTGT	NA	False	NA	26	True	ATTAAA	-15	NA	120784399	120789572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787642_120787719_120788374
ES.36426.4	chr9	+	3554	15	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	171.683753525166	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762460	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762631_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36426.5	chr9	+	4284	14	ISM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	-5	0	-5	0	intron_retention	FALSE	canonical	3	499	junction_2	71.7077401679902	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762460	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657
ES.36426.7	chr9	+	3605	15	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	170.791330492588	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGTGTCATTTTGTTT	NA	False	NA	24	True	ATTAAA	-13	NA	120762474	120789570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786941_120787657_120787719_120788374
ES.36426.9	chr9	+	3574	15	NNC	ENSMUSG00000006932.18	novel	3623	15	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.66677638794	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762503	120789573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_120762705_120779249_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ES.36427.1	chr9	+	180	1	Intergenic	novelGene_29622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTAACATGG	NA	False	NA	NA	False	NA	NA	NA	121041123	121041303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_121041100_121041300
ES.36428.1	chr9	+	171	1	Intergenic	novelGene_29623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGGTTGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	121083425	121083596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_121083400_121083600
ES.36429.1	chr9	-	4120	37	FSM	ENSMUSG00000040936.16	ENSMUST00000171923.8	4103	37	-17	0	-17	0	multi-exon	FALSE	canonical	2	8	junction_10	8.07583653886513	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGTGTCAAACCCTCT	NA	False	NA	-1	True	AATAAA	-16	NA	121106280	120793519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.10	chr9	-	3895	4	NNC	ENSMUSG00000040936.16	novel	3898	34	NA	NA	26842	34170	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.03957069398096	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAATTTTAAAAGCC	8582	False	NA	NA	False	NA	NA	NA	120910749	120868562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120869746_120871444_120873938_120902983_120903083_120910629
ES.36429.11	chr9	-	4875	15	ISM	ENSMUSG00000040936.16	ENSMUST00000051479.13	3898	34	84381	-2988	266	2984	3prime_fragment	FALSE	canonical	2	8	junction_7	7.88080851544706	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGCTGGTGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	121021857	120899748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699
ES.36429.12	chr9	-	3907	34	NIC	ENSMUSG00000040936.16	novel	4200	35	NA	NA	4	-15	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	7.79571590102859	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTCTTGAGAGACAGAT	NA	False	NA	NA	False	ATTAAA	-1	NA	121106259	120902751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.13	chr9	-	181	1	Intergenic	novelGene_29621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATCA	NA	False	NA	NA	False	NA	NA	NA	120981691	120981510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_120981500_120981700
ES.36429.14	chr9	-	2802	23	NIC	ENSMUSG00000040936.16	novel	4200	35	NA	NA	-9	42	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	7.91744595265564	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCCTGATAATGTATT	NA	False	NA	NA	False	AATAAA	-24	NA	121106272	120985874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.15	chr9	-	10745	24	NIC	ENSMUSG00000040936.16	novel	3900	34	NA	NA	-3	38	intron_retention	FALSE	canonical	3	16	junction_15	5.76050039834383	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTCTCCTGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	121106250	120985878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120986096_120986231_120986354_120989335_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.16	chr9	-	2995	25	NIC	ENSMUSG00000040936.16	novel	4200	35	NA	NA	-14	38	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	5.47579902845238	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTCTCCTGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	121106277	120985878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.17	chr9	-	6402	23	NNC	ENSMUSG00000040936.16	novel	4200	35	NA	NA	-8764	38	intron_retention	FALSE	canonical	0	0	junction_7	9.72482976969709	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTCTCCTGATAATG	NA	False	NA	NA	False	AATAAA	-20	NA	121115027	120985878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121037331_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086488_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121114738
ES.36429.18	chr9	-	2308	20	NIC	ENSMUSG00000040936.16	novel	3900	34	NA	NA	-6364	33	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	7.94649698951885	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACATTCTCTCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	121092838	120985883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694
ES.36429.19	chr9	-	2932	25	NNC	ENSMUSG00000040936.16	novel	3900	34	NA	NA	-2	33	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	7.71081041280501	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACATTCTCTCCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	121106240	120985883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089133_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.2	chr9	-	4081	37	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_30	8.83368273243294	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGTGTCAAACCCTCT	NA	False	NA	-1	True	AATAAA	-16	NA	121106259	120793519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089133_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.20	chr9	-	2820	23	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-16	-4807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.25522624345199	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	121106279	120994248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120994548_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.21	chr9	-	3951	21	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	4845	-37433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.1084194720741	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGTATGTTTTTTTG	NA	False	NA	NA	False	TATAAA	-19	NA	121101391	121026874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121028712_121033789_121033874_121037222_121037331_121039152_121039297_121040025_121040199_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090969_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101308
ES.36429.22	chr9	-	3826	20	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-6	-37482	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.61583930796121	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGATGCTTTTATGTA	NA	False	NA	NA	False	AATAAA	-26	NA	121106269	121026923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121028712_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.23	chr9	-	3467	20	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-9	-37844	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.61583930796121	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	121106272	121027285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121028712_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.36429.3	chr9	-	640	5	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	27941	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	7.46240577829965	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCATGTGTCAAACCCT	9681	False	NA	-3	True	AATAAA	-14	NA	120909650	120793521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120909534
ES.36429.8	chr9	-	4214	37	NNC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-8730	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	8.86298308335306	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCTCATGTGTCAAA	NA	False	NA	-7	True	AATAAA	-10	NA	121114993	120793525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121114738
ES.36429.9	chr9	-	3964	35	NIC	ENSMUSG00000040936.16	novel	4103	37	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.47043504763444	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAACCTCATGTGTCAA	NA	False	NA	-8	True	AATAAA	-9	NA	121106278	120793526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ES.3643.1	chr10	-	768	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	2	-109	1	106	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCTTTTATTTATTTT	NA	False	NA	98	True	ATTAAA	-16	NA	95337800	95316560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.11	chr10	-	1120	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	132	junction_2	1514.28562695418	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337805	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.13	chr10	-	786	8	NNC	ENSMUSG00000062981.6	novel	677	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_3	1840.73094399026	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337798	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95326396_95326444_95326648_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.14	chr10	-	653	6	FSM	ENSMUSG00000062981.6	ENSMUST00000075829.3	666	6	13	0	13	0	multi-exon	FALSE	canonical	3	7	junction_5	1622.28826045188	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337776	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337751
ES.3643.16	chr10	-	494	5	FSM	ENSMUSG00000062981.6	ENSMUST00000217777.2	455	5	-11	-28	1	0	multi-exon	FALSE	canonical	3	14	junction_1	1680.921826707	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337800	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95316840_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.17	chr10	-	739	7	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	1766.8786665253	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337798	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95326648_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.19	chr10	-	707	7	NIC	ENSMUSG00000062981.6	novel	677	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_3	1770.46641688944	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337799	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95316840_95326107_95326275_95326396_95326444_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.2	chr10	-	3923	5	NIC	ENSMUSG00000062981.6	novel	661	6	NA	NA	-38	3	intron_retention	FALSE	canonical	3	2875	junction_4	535.975745719897	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTATTTCATTATGT	NA	False	NA	-5	True	AATAAA	-20	NA	95337840	95316663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95316840_95326107_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.22	chr10	-	1562	6	NNC	ENSMUSG00000062981.6	novel	666	6	NA	NA	-2090	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	1968.38975815259	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGTGTGTATTTCAT	NA	False	NA	-10	True	AATAAA	-15	NA	95339892	95316668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326810_95329169_95329578_95332685_95332750_95336244_95336385_95339815
ES.3643.23	chr10	-	2993	3	ISM	ENSMUSG00000062981.6	ENSMUST00000218996.2	3277	4	13	3379	1	-3379	5prime_fragment	FALSE	canonical	3	2875	junction_2	487	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTACTCTTAATGGGAGA	NA	False	NA	NA	False	NA	NA	NA	95337788	95329917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95332750_95336244_95336385_95337767
ES.3643.24	chr10	-	175	1	Intergenic	novelGene_2784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95333382	95333207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95333200_95333400
ES.3643.25	chr10	-	205	1	Intergenic	novelGene_2785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAGCTACAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	95341115	95340910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95340900_95341100
ES.3643.26	chr10	-	136	1	Intergenic	novelGene_2786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAGTAAATTA	NA	False	NA	NA	False	NA	NA	NA	95343631	95343495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95343500_95343600
ES.3643.3	chr10	-	712	6	NNC	ENSMUSG00000062981.6	novel	666	6	NA	NA	-10843	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1625.06708784591	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTATTTCATTATGT	NA	False	NA	-5	True	AATAAA	-20	NA	95348645	95316663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95348565
ES.3643.4	chr10	-	823	7	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	-2097	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1489.21952900019	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGTATTTCATTATG	NA	False	NA	-6	True	AATAAA	-19	NA	95339899	95316664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767_95337876_95339815
ES.3643.5	chr10	-	1513	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	-3	1	intron_retention	FALSE	non_canonical	0	0	junction_2	1564.45921647066	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTGTATTTCATTAT	NA	False	NA	-7	True	AATAAA	-18	NA	95337792	95316665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326810_95329169_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.6	chr10	-	840	6	NIC	ENSMUSG00000062981.6	novel	677	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	54	junction_2	1543.9124845664	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337809	95316666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95316840_95326107_95326444_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.3643.7	chr10	-	5260	4	NIC	ENSMUSG00000062981.6	novel	666	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	3807	junction_1	251.842984593355	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337798	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95316840_95326107_95329578_95332685_95332750_95336244
ES.3643.8	chr10	-	705	6	NNC	ENSMUSG00000062981.6	novel	666	6	NA	NA	-2090	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	1619.11254704545	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95339892	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95339815
ES.3643.9	chr10	-	987	7	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_3	1771.16023649283	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337798	95316667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95316840_95326107_95326275_95326396_95326725_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ES.36430.1	chr9	-	176	1	Intergenic	novelGene_29624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAAGATATTGCCTT	NA	False	NA	NA	False	NA	NA	NA	121120921	121120745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121120700_121120900
ES.36431.1	chr9	+	5264	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-44	1	at_least_one_novel_splicesite	TRUE	canonical	3	68	junction_15	49.7895179103996	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126523	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.10	chr9	+	5581	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	84.2039047660776	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126568	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121292141_121292441_121298050_121298154_121301302
ES.36431.11	chr9	+	5257	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.7993147406407	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGAAAGCTTTTGTC	NA	False	NA	1	True	AATAAA	-9	NA	121126569	121303974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121134692_121134743_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.12	chr9	+	4105	12	NNC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.0071885965818	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTTTTAGGTCCTA	NA	False	NA	2	True	ATTAAA	-12	NA	121126571	121291669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269817_121275844_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.13	chr9	+	4227	14	NIC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	70.8599752658337	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGGTCCTAGTTTTAC	NA	False	NA	9	True	ATTAAA	-19	NA	121126571	121291676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.16	chr9	+	5530	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	95.8682053799286	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126585	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121169687_121169815_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
ES.36431.17	chr9	+	5091	16	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	94.7707409137089	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGCTTTTGTCTTTTT	NA	False	NA	6	True	AATAAA	-14	NA	121126585	121303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269739_121269853_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.18	chr9	+	5607	19	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	106.768990273162	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121126587	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121270205_121270411_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280804_121281214_121281347_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.2	chr9	+	5315	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	-39	-1923	-29	4	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTTTTTTAGTATGT	NA	False	NA	15	True	AATAAA	-23	NA	121126538	121303988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.20	chr9	+	5389	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	87.1577339553714	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126588	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121169687_121169815_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.21	chr9	+	6091	16	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	114	junction_14	41.1272280720314	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121126590	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.23	chr9	+	5348	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	87.6104147638082	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126590	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121300092_121300181_121301302
ES.36431.25	chr9	+	4548	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	452	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	60.0020507462037	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAAGTCCATTGTCCCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	121126590	121303135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
ES.36431.26	chr9	+	3902	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	7	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	49.7895179103996	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCCTCCGTGTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	121126590	121302690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.27	chr9	+	5094	16	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	67.1246270422083	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126590	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121301302
ES.36431.28	chr9	+	5344	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	86.1933129496241	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCTTTTGTCTTTTTT	NA	False	NA	7	True	AATAAA	-15	NA	121126590	121303980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121298786_121298876_121301302
ES.36431.29	chr9	+	4108	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-9	12	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	60.0020507462037	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGTTCTGAGTGATT	NA	False	NA	NA	False	NA	NA	NA	121126590	121302695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
ES.36431.3	chr9	+	5438	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	60.0020507462037	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126550	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
ES.36431.30	chr9	+	5437	9	NNC	ENSMUSG00000032536.13	novel	3533	14	NA	NA	-9	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	83.8196538706764	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTTCCGCCTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	121126590	121284943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269817_121275844_121275887_121277173_121277249_121277887_121278020_121280716
ES.36431.31	chr9	+	5060	16	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	72.8302135106029	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126591	121303981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.32	chr9	+	5397	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	90.5345142467567	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126591	121303981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121270205_121270411_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.34	chr9	+	5713	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.4886640167487	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126591	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121229301_121229618_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
ES.36431.37	chr9	+	4626	16	NNC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	88.4886433391314	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTTTTAGGTCCTA	NA	False	NA	2	True	ATTAAA	-12	NA	121126591	121291669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121169687_121169815_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.38	chr9	+	5284	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	91.3512556187061	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126591	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121300092_121300181_121301302
ES.36431.39	chr9	+	5156	16	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	2	13	junction_15	64.071834685765	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126591	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121301302
ES.36431.4	chr9	+	4546	15	ISM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	-25	10388	-15	1	5prime_fragment	FALSE	canonical	3	209	junction_1	22.8924949826491	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTCCTAGTTTTACT	NA	False	NA	10	True	ATTAAA	-20	NA	121126552	121291677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.40	chr9	+	4548	16	NNC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4853433064134	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTTTTAGGTCCTA	NA	False	NA	2	True	ATTAAA	-12	NA	121126592	121291669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121134692_121134743_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.41	chr9	+	5809	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	71.1112409802417	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126594	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121281347_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.42	chr9	+	4501	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-3	449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75.8289347396494	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCAAGTCCATTGTCC	NA	False	NA	NA	False	ATTAAA	-11	NA	121126596	121303132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193514_121220907_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.44	chr9	+	4331	18	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	69.3961098996489	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCTTTTGTCTTTTTTT	NA	False	NA	8	True	AATAAA	-16	NA	121126605	121303981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302_121302244_121303153
ES.36431.46	chr9	+	4369	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	58	-1074	36	456	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATTGTCCCCTCATC	NA	False	NA	NA	False	ATTAAA	-18	NA	121126635	121303139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.47	chr9	+	5195	18	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	2327	60561	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.0286993151335	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGGAGAGATGGCTC	712	False	NA	NA	False	NA	NA	NA	121129221	121364545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121129413_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302_121303986_121364492
ES.36431.48	chr9	+	5102	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-4669	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.3280274506452	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121138634	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121138789_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.49	chr9	+	3379	14	NNC	ENSMUSG00000032536.13	novel	651	2	NA	NA	-4669	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.6139386782891	616	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTATTTCCGCCTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	121138634	121284940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121138789_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ES.36431.5	chr9	+	4347	14	NIC	ENSMUSG00000032536.13	novel	3353	17	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	71.2347564924902	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGGTCCTAGTTTTAC	NA	False	NA	9	True	ATTAAA	-19	NA	121126555	121291676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121126900_121193066_121193366_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.50	chr9	+	5005	17	NIC	ENSMUSG00000032536.13	novel	510	3	NA	NA	68	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	70.9232639900336	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121143371	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121143426_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.51	chr9	+	5102	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	22137	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.979095705579	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121165440	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121165542_121169687_121169815_121193066_121193366_121220922_121221118_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.52	chr9	+	4969	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	22154	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	76.3478879865056	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121165457	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121165542_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.53	chr9	+	3416	15	NNC	ENSMUSG00000032536.13	novel	651	2	NA	NA	22169	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.388124034613	615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCGCCTTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	121165472	121284947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121165542_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121281231_121281347_121282273_121282511_121283344
ES.36431.54	chr9	+	5077	18	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	22173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.2515819647674	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121165476	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121165542_121169687_121169815_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.55	chr9	+	4951	15	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-14669	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.0433167789377	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTTAGGTCCTAGTT	NA	False	NA	5	True	ATTAAA	-15	NA	121181364	121291672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121182122_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ES.36431.56	chr9	+	4991	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-14649	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	76.3478879865056	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121181384	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121181488_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.57	chr9	+	5252	18	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-14642	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	100.210919433475	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121181391	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121181488_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121270205_121270411_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.58	chr9	+	5378	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-14339	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.3280274506452	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121181694	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121182122_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.59	chr9	+	5031	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-14061	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.7193546310186	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGCTTTTGTCTTTTT	NA	False	NA	6	True	AATAAA	-14	NA	121181972	121303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121182122_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.6	chr9	+	3576	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	-44	1	-12	-1	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCCGCCTTTCTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	121126555	121284947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ES.36431.60	chr9	+	3792	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-12936	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	89.7646227642048	681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATTGATTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	121183097	121302706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121183216_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269855_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.61	chr9	+	5060	17	NNC	ENSMUSG00000032536.13	novel	736	3	NA	NA	-12927	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	71.1255217467682	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121183106	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121183216_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.63	chr9	+	3145	13	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	-37	19038	11	-2	5prime_fragment	FALSE	canonical	0	0	junction_1	73.68339742137	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCCGCCTTTCTTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	121196044	121284946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121196258_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ES.36431.64	chr9	+	4825	16	FSM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	-3	5	-2	-3	multi-exon	FALSE	canonical	0	0	junction_1	72.6943066699327	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAAGCTTTTGTCTTTTT	NA	False	NA	6	True	AATAAA	-14	NA	121196078	121303979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121196258_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.65	chr9	+	179	1	Intergenic	novelGene_29626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121198162	121198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_121198200_121198300
ES.36431.66	chr9	+	4870	16	NNC	ENSMUSG00000032536.13	novel	434	4	NA	NA	-142	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	77.8277299910228	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121211717	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121211999_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.67	chr9	+	4262	12	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	75674	2	-11606	0	3prime_fragment	FALSE	canonical	3	114	junction_10	45.5459081813736	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121271755	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.68	chr9	+	3645	6	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	84626	-1	-2654	1	3prime_fragment	FALSE	canonical	3	114	junction_4	52.7234293270079	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121280707	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.69	chr9	+	3098	5	NNC	ENSMUSG00000032536.13	novel	4052	18	NA	NA	5941	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.198336581375	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTCTTTTTTTAG	NA	False	NA	10	True	AATAAA	-18	NA	121289302	121303983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121289331_121289424_121289644_121295976_121296044_121298050_121298154_121301302
ES.36431.7	chr9	+	4013	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	-22	-638	-12	20	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGATTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	121126555	121302703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ES.36431.70	chr9	+	2347	1	NIC	ENSMUSG00000032536.13	novel	4052	18	NA	NA	5961	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTTTTAGGTCCTA	NA	False	NA	2	True	ATTAAA	-12	NA	121289322	121291669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121289300_121291700
ES.36431.71	chr9	+	3044	3	NNC	ENSMUSG00000032536.13	novel	4827	16	NA	NA	5961	1	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	85	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121289322	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121289581_121298050_121298154_121301302
ES.36431.72	chr9	+	3104	3	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	93244	-1	5964	1	3prime_fragment	FALSE	canonical	3	114	junction_1	62	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121289325	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121289644_121298050_121298154_121301302
ES.36431.73	chr9	+	7092	2	ISM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	97663	-1	10383	1	3prime_fragment	FALSE	canonical	3	238	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121293744	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121298154_121301302
ES.36431.74	chr9	+	5075	3	NNC	ENSMUSG00000032536.13	novel	4052	18	NA	NA	12293	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	117.5	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121295654	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121297944_121298050_121298154_121301302
ES.36431.75	chr9	+	112	1	Intergenic	novelGene_29628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	121340952	121341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_121341000_121341100
ES.36431.8	chr9	+	5241	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.8631088364242	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTTTGTCTTTTTTTA	NA	False	NA	9	True	AATAAA	-17	NA	121126565	121303982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283322_121283662_121289424_121289581_121298050_121298154_121301302
ES.36431.9	chr9	+	5411	18	NNC	ENSMUSG00000032536.13	novel	4052	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	87.8986519258437	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTTTTTTTAGTA	NA	False	NA	12	True	AATAAA	-20	NA	121126567	121303985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121300968_121301097_121301302
ES.36432.1	chr9	-	1379	1	Intergenic	novelGene_29625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCCTGAATTCTA	NA	False	NA	NA	False	NA	NA	NA	121131125	121129746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121129700_121131100
ES.36433.1	chr9	-	213	2	Antisense	novelGene_ENSMUSG00000110751.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTACTGTTCTGAGAT	NA	False	NA	NA	False	NA	NA	NA	121148460	121148190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121148230_121148286
ES.36433.2	chr9	-	201	2	Antisense	novelGene_ENSMUSG00000110751.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTACTGTTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	121148460	121148191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121148247_121148314
ES.36433.3	chr9	-	216	2	Antisense	novelGene_ENSMUSG00000110751.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGCTTTTCTTCTACTG	NA	False	NA	NA	False	NA	NA	NA	121148460	121148199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121148240_121148284
ES.36433.4	chr9	-	153	1	Antisense	novelGene_ENSMUSG00000110751.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	121148459	121148306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121148300_121148500
ES.36434.1	chr9	-	4311	4	Antisense	novelGene_ENSMUSG00000110738.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	121242215	121151501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121152855_121236827_121238883_121241254_121241370_121241427
ES.36434.2	chr9	-	2937	1	Antisense	novelGene_ENSMUSG00000032536.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGCCAGCCGTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	121212640	121209703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121209700_121212600
ES.36435.1	chr9	-	2969	2	Antisense	novelGene_ENSMUSG00000032536.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGAGGCTGGGACTTTCT	NA	False	NA	NA	False	NA	NA	NA	121296614	121292650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121293285_121294279
ES.36435.2	chr9	-	3944	1	Antisense	novelGene_ENSMUSG00000032536.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121296614	121292670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121292700_121296600
ES.36436.1	chr9	-	156	1	Intergenic	novelGene_29627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	5430	False	NA	NA	False	NA	NA	NA	121309376	121309220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121309200_121309400
ES.36437.1	chr9	-	690	1	Intergenic	novelGene_29629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTCTTTGTCTTGGTC	NA	False	NA	NA	False	NA	NA	NA	121426310	121425620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121425600_121426300
ES.36438.1	chr9	+	4897	13	FSM	ENSMUSG00000032528.6	ENSMUST00000035115.5	4902	13	-7	12	-7	-12	multi-exon	TRUE	canonical	0	0	junction_1	1.08012344973464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTCCTGAGCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	121471774	121502008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121471993_121482864_121482971_121487112_121487221_121489232_121489340_121490027_121490135_121490461_121490595_121493589_121493744_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ES.36438.2	chr9	+	4754	14	NNC	ENSMUSG00000032528.6	novel	4902	13	NA	NA	18	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.07141448286032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTGAGCTGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	121471799	121502010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121471993_121482864_121482971_121487112_121487221_121489232_121489340_121490027_121490135_121490461_121490595_121493589_121493744_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439_121500696_121500815
ES.36438.3	chr9	+	4624	11	NNC	ENSMUSG00000032528.6	novel	4902	13	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.916515138991168	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTGAGCTGCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	121471815	121502011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121471993_121482864_121482971_121490027_121490135_121490461_121490595_121493589_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ES.36439.1	chr9	-	2325	1	Antisense	novelGene_ENSMUSG00000032528.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCAAG	7318	False	NA	NA	False	NA	NA	NA	121488393	121486068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_121486100_121488400
ES.3644.1	chr10	+	1758	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-453	2562	-453	89	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTAGTCCTCTCCATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	95350553	95378957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ES.3644.10	chr10	+	4549	2	FSM	ENSMUSG00000074781.6	ENSMUST00000219381.2	699	2	-12	-3838	0	3	multi-exon	FALSE	canonical	3	2257	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTTGACTGGTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	95351006	95381522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066
ES.3644.11	chr10	+	643	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	3224	0	98	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGTGATTACATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	95351006	95378295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ES.3644.12	chr10	+	1068	3	NIC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	1127	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCTTTGTACAGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	95351012	95378867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95351100_95377066_95377314_95378133
ES.3644.13	chr10	+	1061	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	13	2793	1	-106	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACTTTGCTGTCAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	95351019	95378726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ES.3644.14	chr10	+	1501	4	NIC	ENSMUSG00000074781.6	novel	512	3	NA	NA	215	0	combination_of_known_junctions	FALSE	canonical	1	21	junction_1	891.001808203677	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95351261	95378868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95351640_95377066_95377314_95377499_95377641_95378133
ES.3644.15	chr10	+	2368	1	NIC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	-754	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGCCTTTGTACAGTT	NA	False	NA	NA	False	AGTAAA	-17	NA	95376499	95378867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95376500_95378900
ES.3644.16	chr10	+	1847	2	FSM	ENSMUSG00000074781.6	ENSMUST00000217757.2	330	2	188	-1705	188	1034	multi-exon	FALSE	canonical	3	1883	junction_1	0	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGTGAAATTTTAAACT	NA	False	NA	NA	False	AATAAA	-21	NA	95377562	95379902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95377641_95378133
ES.3644.2	chr10	+	4180	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-307	-6	-307	6	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGACTGGTCTGTTTC	NA	False	NA	19	True	AATAAA	-23	NA	95350699	95381525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ES.3644.3	chr10	+	1651	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	-149	2365	-149	286	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTGTCCTTGCCAT	NA	False	NA	12	True	AATAAA	-23	NA	95350857	95379154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ES.3644.4	chr10	+	1921	2	FSM	ENSMUSG00000074781.6	ENSMUST00000219381.2	699	2	-38	-1184	-26	0	multi-exon	FALSE	canonical	3	2257	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95350980	95378868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066
ES.3644.5	chr10	+	1427	3	NIC	ENSMUSG00000074781.6	novel	1103	4	NA	NA	-25	0	intron_retention	FALSE	canonical	3	1883	junction_2	187	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95350981	95378868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95351100_95377066_95377641_95378133
ES.3644.6	chr10	+	1447	4	FSM	ENSMUSG00000074781.6	ENSMUST00000220127.2	1103	4	-61	-283	-21	283	multi-exon	FALSE	canonical	2	5	junction_2	985.351826619417	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCTTGGTGTCCTTGC	NA	False	NA	9	True	AATAAA	-20	NA	95350985	95379151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377241_95377499_95377641_95378133
ES.3644.7	chr10	+	4074	3	NIC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	-21	0	intron_retention	FALSE	canonical	3	1883	junction_2	187	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGATTTGACTGGTC	NA	False	NA	13	True	AATAAA	-17	NA	95350985	95381519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95351100_95377066_95377641_95378133
ES.3644.9	chr10	+	1236	4	FSM	ENSMUSG00000074781.6	ENSMUST00000220127.2	1103	4	-46	-87	-6	87	multi-exon	FALSE	canonical	2	5	junction_2	985.351826619417	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTAGTCCTCTCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	95351000	95378955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95351100_95377066_95377241_95377499_95377641_95378133
ES.36440.1	chr9	-	5944	9	NNC	ENSMUSG00000061536.14	novel	5713	8	NA	NA	-43	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.13013554116257	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	-5	True	AATAAA	-16	NA	121534599	121509112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510106_121510156_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121529618_121529744_121534279
ES.36440.10	chr9	-	2497	6	FSM	ENSMUSG00000061536.14	ENSMUST00000139193.2	938	6	-34	-1525	16	8	multi-exon	FALSE	canonical	2	3	junction_4	7.62627038597505	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTATTGTTTTCCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	121534079	121512091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
ES.36440.11	chr9	-	2544	8	FSM	ENSMUSG00000061536.14	ENSMUST00000078547.12	5713	8	-58	3227	12	-238	multi-exon	FALSE	canonical	1	1	junction_7	8.73183245139207	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATCTTTATTGTCTG	NA	False	NA	NA	False	NA	NA	NA	121534083	121512337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121529618_121529744_121533989
ES.36440.2	chr9	-	5577	8	NNC	ENSMUSG00000061536.14	novel	5713	8	NA	NA	-22	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.13658906622751	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	-5	True	AATAAA	-16	NA	121534067	121509112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510106_121510156_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ES.36440.3	chr9	-	5484	6	FSM	ENSMUSG00000061536.14	ENSMUST00000139193.2	938	6	-42	-4504	8	-2	multi-exon	FALSE	canonical	2	3	junction_4	7.62627038597505	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	-5	True	AATAAA	-16	NA	121534087	121509112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
ES.36440.4	chr9	-	5405	7	NNC	ENSMUSG00000061536.14	novel	2669	7	NA	NA	7	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.11805291105995	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	-5	True	AATAAA	-16	NA	121534088	121509112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510036_121510115_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121524599_121524809_121533989
ES.36440.5	chr9	-	5569	8	NNC	ENSMUSG00000061536.14	novel	5713	8	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.13658906622751	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTGTTTGTGTGTG	NA	False	NA	-5	True	AATAAA	-16	NA	121534088	121509112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510036_121510115_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ES.36440.6	chr9	-	5536	8	NNC	ENSMUSG00000061536.14	novel	5713	8	NA	NA	-20	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.13658906622751	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGTGTTTGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	121534065	121509113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510027_121510115_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ES.36440.7	chr9	-	5228	6	NNC	ENSMUSG00000061536.14	novel	938	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.5261578935526	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGTGTTTGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	121534092	121509113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510106_121510156_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121533989
ES.36440.8	chr9	-	3691	2	NNC	ENSMUSG00000061536.14	novel	2669	7	NA	NA	6686	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGTGTTTGTGTGT	NA	False	NA	-6	True	AATAAA	-15	NA	121512853	121509113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121510135_121510183
ES.36440.9	chr9	-	2680	7	FSM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	1	-12	1	12	multi-exon	FALSE	canonical	3	5	junction_5	6.55108133567785	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTGTTTTCCTCCTGA	NA	False	NA	NA	False	ATTAAA	-21	NA	121534094	121512087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ES.36441.1	chr9	+	553	3	FSM	ENSMUSG00000032526.12	ENSMUST00000215104.2	315	3	-68	-170	3	3	multi-exon	FALSE	canonical	2	7	junction_1	206	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCCCATGTCAACTAAT	NA	False	NA	14	True	AATAAA	-19	NA	121539397	121541990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121539514_121539704_121539782_121541630
ES.36441.2	chr9	+	564	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	13	0	-4	0	multi-exon	FALSE	canonical	3	377	junction_1	21	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539407	121541987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121539538_121539704_121539782_121541630
ES.36441.3	chr9	+	692	2	FSM	ENSMUSG00000032526.12	ENSMUST00000214535.2	1175	2	12	471	5	-4	multi-exon	FALSE	canonical	3	419	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTCAGTGTCCCATGTC	NA	False	NA	7	True	AATAAA	-12	NA	121539442	121541983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121539782_121541630
ES.36442.1	chr9	-	257	1	Intergenic	novelGene_29630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTAAACCTACGAGT	NA	False	NA	NA	False	NA	NA	NA	121547299	121547042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121547000_121547300
ES.36443.1	chr9	+	6405	16	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-27	-1	intron_retention	FALSE	canonical	3	26	junction_7	10.0783596548909	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548207	121583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.10	chr9	+	6771	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	0	-205	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	14.4629343699069	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTTAATAGAAAATGCT	NA	False	NA	NA	False	AATAAA	-20	NA	121548243	121585704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.11	chr9	+	6859	18	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	0	-189	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	11.909113720986	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTTTATTGGATGAT	NA	False	NA	NA	False	AATAAA	-36	NA	121548243	121585720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.12	chr9	+	4757	19	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.5682278122769	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGTCTGTTGTGTTTT	NA	False	NA	2	True	AAGAAA	-5	NA	121548246	121583462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121548919_121549079_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.13	chr9	+	6291	16	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	2	-2	intron_retention	FALSE	canonical	3	9	junction_7	13.7103367330395	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGGCAGTCTGTTGTGTT	NA	False	NA	0	True	AAGAAA	-3	NA	121548248	121583460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.14	chr9	+	7007	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	8	7	3	-7	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTTGGTCTTT	NA	False	NA	2	True	AATACA	-12	NA	121548249	121585902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.16	chr9	+	7311	15	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	5	-1	intron_retention	FALSE	canonical	3	26	junction_6	9.8519655140381	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548251	121583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.17	chr9	+	5623	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	10	571	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_16	13.0067855594007	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGGTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	121548256	121584494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.18	chr9	+	6887	16	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	14.7325791662183	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTTGGTCTTT	NA	False	NA	2	True	AATACA	-12	NA	121548264	121585902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.19	chr9	+	1028	11	NNC	ENSMUSG00000032525.16	novel	2576	11	NA	NA	-10	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.4854770672395	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGCTTAATAGAAAATG	NA	False	NA	NA	False	AATAAA	-18	NA	121548270	121585702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571833_121585574
ES.36443.2	chr9	+	7083	18	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-27	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	11.909113720986	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	8	True	AATACA	-18	NA	121548207	121585908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.20	chr9	+	6790	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-9	-205	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	12.6859604977313	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTTAATAGAAAATGCT	NA	False	NA	NA	False	AATAAA	-20	NA	121548271	121585704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.22	chr9	+	4733	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-9	185	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	12.6859604977313	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATAATTTGCAGTGTCA	NA	False	NA	NA	False	AAGAAA	-16	NA	121548271	121583647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.23	chr9	+	6754	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-9	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	18.375175069194	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTTTATTGGATGAT	NA	False	NA	NA	False	AATAAA	-36	NA	121548271	121585720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121567453_121567482_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.24	chr9	+	7042	19	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	16.67074024292	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	3	True	AATACA	-13	NA	121548271	121585903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121567453_121567482_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.26	chr9	+	7029	18	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	17.4355957741627	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	3	True	AATACA	-13	NA	121548277	121585903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580346_121580476_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.27	chr9	+	10494	14	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	18	junction_4	12.1592003785674	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	8	True	AATACA	-18	NA	121548281	121585908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121582159_121583310
ES.36443.29	chr9	+	7106	19	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.4481254693623	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGGTCTTTCTTTGCT	NA	False	NA	9	True	AATACA	-19	NA	121548283	121585909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121567453_121567482_121570187_121570218_121570663_121570810_121571630_121571924_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.3	chr9	+	4598	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	-24	2448	-17	-1	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548217	121583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.30	chr9	+	1575	3	ISM	ENSMUSG00000032525.16	ENSMUST00000183311.8	2548	4	2	1287	2	-1287	5prime_fragment	FALSE	canonical	3	44	junction_2	1	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCAATATTGCTTTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	121548284	121557792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121548362_121548524_121548612_121556381
ES.36443.31	chr9	+	6903	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	14.7985166064035	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGTCTTTCTTTGCTC	NA	False	NA	10	True	AATACA	-20	NA	121548284	121585910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.32	chr9	+	5550	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	57	1415	16	571	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGGGTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	121548298	121584494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.33	chr9	+	7068	20	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.2676003332585	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGCTTGGTCTTTCTT	NA	False	NA	5	True	AATACA	-15	NA	121548300	121585905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557647_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121567453_121567482_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121573740_121573798_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.34	chr9	+	6803	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	16.0657827384787	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCTTGGTCTTTCTTT	NA	False	NA	6	True	AATACA	-16	NA	121548305	121585906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.36	chr9	+	6718	16	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	27	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.8799684043938	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTTGGTCTTTC	NA	False	NA	3	True	AATACA	-13	NA	121548309	121585903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.38	chr9	+	6661	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	40	-208	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	14.3396303997	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTGCTTAATAGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	121548322	121585701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.39	chr9	+	4429	16	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	13.5875760245241	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTCTGTTGTGTTTTA	NA	False	NA	3	True	AAGAAA	-6	NA	121548476	121583463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.4	chr9	+	6753	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-8	-207	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	14.7985166064035	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGCTTAATAGAAAATG	NA	False	NA	NA	False	AATAAA	-18	NA	121548226	121585702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.40	chr9	+	4517	16	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-6	38	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	12.9707362936728	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGATATTTCTTGTC	NA	False	NA	40	True	AAGAAA	-43	NA	121548503	121583500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.41	chr9	+	6700	16	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	12	-208	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	12.9707362936728	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTGCTTAATAGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	121548521	121585701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.42	chr9	+	4444	1	NIC	ENSMUSG00000032525.16	novel	2576	11	NA	NA	-134	-3060	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACACATATATGTACACA	NA	False	NA	NA	False	NA	NA	NA	121560078	121564522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121560100_121564500
ES.36443.43	chr9	+	5706	11	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-1266	-3	intron_retention	FALSE	canonical	3	9	junction_2	14.5907504947484	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGGCAGTCTGTTGTGT	NA	False	NA	-1	True	AAGAAA	-2	NA	121568455	121583459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.44	chr9	+	7788	11	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-1102	-207	intron_retention	FALSE	canonical	3	9	junction_2	16.1913557184073	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGCTTAATAGAAAATG	NA	False	NA	NA	False	AATAAA	-18	NA	121568619	121585702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582053_121582159_121583310
ES.36443.45	chr9	+	7084	11	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-238	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.9717412188614	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTTTATTGGATGAT	NA	False	NA	NA	False	AATAAA	-36	NA	121569483	121585720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121570218_121570663_121570810_121571630_121571924_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.46	chr9	+	6897	11	ISM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	21340	208	-140	-208	3prime_fragment	FALSE	canonical	3	26	junction_2	11.5394973894013	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTGCTTAATAGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	121569581	121585701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.47	chr9	+	6785	7	ISM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	25676	208	4196	-208	3prime_fragment	FALSE	canonical	3	27	junction_5	10.9354164682162	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTGCTTAATAGAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	121573917	121585701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.48	chr9	+	4710	5	NNC	ENSMUSG00000032525.16	novel	539	6	NA	NA	-1329	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.4398801097804	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGCCTGCTTGGTCTT	NA	False	NA	1	True	AATACA	-11	NA	121578151	121585901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121579953_121580732_121580829_121581412_121581530_121582053_121582159_121583310
ES.36443.49	chr9	+	6801	2	ISM	ENSMUSG00000032525.16	ENSMUST00000182503.8	539	6	-967	-3003	-596	556	intron_retention	FALSE	canonical	3	52	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAATTAATTAATTAATT	NA	False	NA	NA	False	NA	NA	NA	121578884	121586465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121579953_121580732
ES.36443.5	chr9	+	5062	17	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	9	junction_9	13.6792212406262	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGGCAGTCTGTTGTG	NA	False	NA	-2	True	AAGAAA	-1	NA	121548230	121583458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121582159_121583310
ES.36443.50	chr9	+	5200	3	FSM	ENSMUSG00000032525.16	ENSMUST00000213351.2	741	3	-196	-4263	-196	-1	multi-exon	FALSE	canonical	3	50	junction_2	1	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	8	True	AATACA	-18	NA	121579284	121585908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121579953_121580732_121580829_121581472
ES.36443.51	chr9	+	4193	3	NIC	ENSMUSG00000032525.16	novel	539	6	NA	NA	68	-1	intron_retention	FALSE	canonical	3	50	junction_1	5.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTGGTCTTTCTTTGC	NA	False	NA	8	True	AATACA	-18	NA	121579919	121585908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121580829_121581472_121582159_121583310
ES.36443.6	chr9	+	4604	18	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	11.909113720986	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCAGTCTGTTGTGTTTT	NA	False	NA	2	True	AAGAAA	-5	NA	121548240	121583462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.7	chr9	+	4496	17	NNC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	16.3893067272536	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548240	121583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121548362_121548524_121548612_121556381_121556457_121558701_121558747_121559062_121559091_121560543_121560632_121570187_121570218_121570663_121570810_121571629_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36443.9	chr9	+	4499	17	NIC	ENSMUSG00000032525.16	novel	7022	17	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.2863593113388	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCAGTCTGTTGTGTTT	NA	False	NA	1	True	AAGAAA	-4	NA	121548241	121583461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571705_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ES.36444.1	chr9	+	4087	6	NIC	ENSMUSG00000013419.8	novel	2136	7	NA	NA	-506	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7.7614431647729	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGGGCAGGCCCAAG	858	False	NA	NA	False	AATAAA	-20	NA	121587889	121598120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121588505_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ES.36444.2	chr9	+	3985	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-321	2689	-321	-1	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGTGGGCAGGCCCAA	1746	False	NA	NA	False	AATAAA	-19	NA	121588777	121598119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ES.36444.3	chr9	+	2806	3	NNC	ENSMUSG00000013419.8	novel	6353	6	NA	NA	-26	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	3.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGTGGGCAGGCCCAA	2041	False	NA	NA	False	AATAAA	-19	NA	121589072	121598119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121589292_121591684_121592972_121596819
ES.36444.4	chr9	+	4889	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-24	1488	-24	1200	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGGCCCAGCCTCTTC	2043	False	NA	NA	False	AATAAA	-17	NA	121589074	121599320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ES.36444.5	chr9	+	3796	7	NNC	ENSMUSG00000013419.8	novel	6353	6	NA	NA	-19	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.23441288469042	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTCGGCTGAGTCGG	2048	False	NA	NA	False	AATAAA	-37	NA	121589079	121598137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121589292_121591684_121593188_121594548_121594697_121595010_121595106_121595532_121595649_121596304_121596450_121596560
ES.36444.6	chr9	+	4102	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	-13	2264	-13	424	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGACCACCTCAAGGGG	2054	False	NA	NA	False	NA	NA	NA	121589085	121598544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ES.36445.1	chr9	+	3919	7	NNC	ENSMUSG00000074001.4	novel	2370	6	NA	NA	578	2209	intron_retention	TRUE	canonical	0	0	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCAAGTCACATCAGTT	7533	False	NA	NA	False	NA	NA	NA	121607334	121615093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121607994_121608988_121609150_121609437_121609546_121609637_121609824_121611595_121611743_121612353_121613417_121613498
ES.36445.2	chr9	+	1793	6	FSM	ENSMUSG00000074001.4	ENSMUST00000098272.4	2370	6	579	-2	579	2	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGATCTAGAATCAAC	7534	False	NA	NA	False	AATAAA	-19	NA	121607335	121612886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121607994_121608988_121609150_121609437_121609546_121609637_121609824_121611595_121611743_121612353
ES.36445.3	chr9	+	1401	6	FSM	ENSMUSG00000074001.4	ENSMUST00000098272.4	2370	6	604	365	604	-365	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	7559	False	NA	NA	False	NA	NA	NA	121607360	121612519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121607994_121608988_121609150_121609437_121609546_121609637_121609824_121611595_121611743_121612353
ES.36446.1	chr9	-	2593	15	ISM	ENSMUSG00000079235.11	ENSMUST00000135986.9	2640	16	5508	-4	-2874	4	3prime_fragment	FALSE	canonical	1	2	junction_4	1.88034951158403	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCGTGGAGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	121663019	121626688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_121627306_121628091_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
ES.36446.2	chr9	-	3374	14	NIC	ENSMUSG00000079235.11	novel	2640	16	NA	NA	-2874	-1	intron_retention	FALSE	canonical	1	2	junction_3	1.94601702164208	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACAGCTCTCGTGGAGTG	NA	False	NA	NA	False	NA	NA	NA	121663019	121626693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121628207_121629568_121629718_121637217_121637341_121638146_121638231_121639159_121639288_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
ES.36446.3	chr9	-	1535	10	NNC	ENSMUSG00000079235.11	novel	2640	16	NA	NA	-2871	4511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.3778816176703	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTTGACAATGTCAT	NA	False	NA	NA	False	ATTAAA	-7	NA	121663016	121641916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_121642078_121642351_121642559_121643235_121643413_121645658_121645821_121648560_121648666_121649725_121649843_121654033_121654124_121656298_121656442_121659942_121660092_121662792
ES.36447.1	chr9	-	1839	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	398	-5	-351	5	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTTGTTTTTATTTC	NA	False	NA	2	True	ATTAAA	-18	NA	121687030	121677623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ES.36447.3	chr9	-	1588	5	NIC	ENSMUSG00000038412.9	novel	713	6	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	1100.26050892505	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATGTCTTGTTTTTAT	NA	False	NA	-1	True	ATTAAA	-15	NA	121686630	121677626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121678756_121679253_121679389_121681556_121681676_121685786_121685939_121686577
ES.36447.4	chr9	-	886	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	371	975	371	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121687057	121678603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ES.36447.6	chr9	-	627	5	NIC	ENSMUSG00000038412.9	novel	713	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	1100.26050892505	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACGGTATTGAATATT	NA	False	NA	-26	True	AATAAA	-19	NA	121686647	121678604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121678756_121679253_121679389_121681556_121681676_121685786_121685939_121686577
ES.36447.7	chr9	-	975	3	FSM	ENSMUSG00000038412.9	ENSMUST00000215007.2	1980	3	29	976	-16	0	multi-exon	FALSE	canonical	3	2040	junction_2	90	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACGGTATTGAATATT	NA	False	NA	-26	True	AATAAA	-19	NA	121686649	121678604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121679389_121681556_121681676_121686577
ES.36447.9	chr9	-	615	5	NIC	ENSMUSG00000038412.9	novel	713	6	NA	NA	21	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1104.51369389429	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACACGGTATTGAATA	NA	False	NA	-28	True	AATAAA	-17	NA	121686657	121678606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121678756_121679253_121679389_121681556_121681672_121685515_121685652_121686577
ES.36448.1	chr9	-	158	1	Intergenic	novelGene_29631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121721193	121721035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121721000_121721200
ES.36449.1	chr9	-	177	1	Intergenic	novelGene_29632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAATTACAAC	NA	False	NA	NA	False	NA	NA	NA	121721947	121721770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_121721800_121721900
ES.3645.1	chr10	-	311	1	Intergenic	novelGene_2787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAACAAATGAAGC	NA	False	NA	NA	False	NA	NA	NA	95360247	95359936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95359900_95360200
ES.3645.2	chr10	-	159	1	Intergenic	novelGene_2788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	95360248	95360089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95360100_95360200
ES.36450.1	chr9	+	976	5	FSM	ENSMUSG00000043773.6	ENSMUST00000214777.2	1900	5	51	873	51	-871	multi-exon	FALSE	canonical	0	0	junction_1	4.81534007106456	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATAGGCTGAGAATCT	6309	False	NA	NA	False	AATAAA	-37	NA	121766339	121775209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121766386_121767041_121767229_121768484_121768568_121769749_121769877_121774676
ES.36450.2	chr9	+	6457	3	ISM	ENSMUSG00000043773.6	ENSMUST00000063103.5	1642	4	-13	-2	6	0	intron_retention	FALSE	canonical	2	9	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGTCATGATGT	7157	False	NA	NA	False	NA	NA	NA	121767187	121776082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121767229_121768484_121768568_121769749
ES.36451.1	chr9	-	2467	3	NIC	ENSMUSG00000066235.8	novel	2504	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825087	121810674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121812890_121823910_121824017_121824941
ES.36451.2	chr9	-	2615	3	NIC	ENSMUSG00000066235.8	novel	463	4	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825072	121810674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121812890_121823910_121824180_121824941
ES.36451.3	chr9	-	2349	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	16	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825075	121810674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121812890_121824941
ES.36451.4	chr9	-	2486	4	FSM	ENSMUSG00000066235.8	ENSMUST00000215084.2	463	4	7	-2030	3	-7	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCCCAAGTCTTT	NA	False	NA	-12	True	ATTAAA	-9	NA	121825068	121810683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_121812890_121823910_121824017_121824132_121824180_121824941
ES.36451.5	chr9	-	2663	4	NIC	ENSMUSG00000066235.8	novel	463	4	NA	NA	-1	-7	intron_retention	FALSE	canonical	1	1	junction_2	2.35702260395516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCCCAAGTCTTT	NA	False	NA	-12	True	ATTAAA	-9	NA	121825072	121810683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_121812890_121813165_121813223_121823910_121824180_121824941
ES.36452.1	chr9	+	3161	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	-33	1630	4	597	multi-exon	FALSE	canonical	2	8	junction_1	10.6695829346793	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8223	False	NA	NA	False	NA	NA	NA	121946335	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.10	chr9	+	3140	6	NIC	ENSMUSG00000038145.18	novel	4811	7	NA	NA	1	597	intron_retention	FALSE	canonical	0	0	junction_5	16.5336021483523	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8254	False	NA	NA	False	NA	NA	NA	121946366	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946569_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121995301
ES.36452.11	chr9	+	3122	9	NNC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	1	560	intron_retention	FALSE	non_canonical	0	0	junction_4	11.1579568022107	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	8254	False	NA	NA	False	NA	NA	NA	121946366	121997101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966050_121966193_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.12	chr9	+	3398	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	1	597	intron_retention	FALSE	canonical	1	1	junction_1	11.5245965886278	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8254	False	NA	NA	False	NA	NA	NA	121946366	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946569_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.13	chr9	+	4756	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	2	0	1	0	multi-exon	FALSE	canonical	2	8	junction_1	10.6695829346793	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGTCTGTGTTCCTTTT	8258	False	NA	NA	False	AATAAA	-28	NA	121946370	121998768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.14	chr9	+	3256	10	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	2	570	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	13.5135962626762	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8273	False	NA	NA	False	NA	NA	NA	121946385	121997111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301_121996015_121996131
ES.36452.15	chr9	+	3130	9	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	2	560	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	11.1579568022107	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	8273	False	NA	NA	False	NA	NA	NA	121946385	121997101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301_121996015_121996131
ES.36452.16	chr9	+	4903	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	8	-5	intron_retention	FALSE	canonical	3	20	junction_3	6.34388666033558	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCCGAGTCTGTGTTC	8279	False	NA	NA	False	AATAAA	-23	NA	121946391	121998763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.17	chr9	+	5012	9	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	13	-7	intron_retention	FALSE	canonical	1	1	junction_3	11.9209636774885	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAAGCCGAGTCTGTGT	8284	False	NA	NA	False	AATAAA	-21	NA	121946396	121998761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.18	chr9	+	612	1	NIC	ENSMUSG00000038145.18	novel	1082	5	NA	NA	13	-16134	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGCTTGGACTCGGG	8284	False	NA	NA	False	AATAAA	-16	NA	121946396	121947008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946400_121947000
ES.36452.19	chr9	+	4214	9	NNC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	13	597	intron_retention	FALSE	canonical	0	0	junction_1	14.3739130023804	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8284	False	NA	NA	False	NA	NA	NA	121946396	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121947120_121960958_121961009_121961693_121961817_121965971_121966668_121973444_121973740_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.2	chr9	+	3313	9	NNC	ENSMUSG00000038145.18	novel	4811	7	NA	NA	7	558	intron_retention	FALSE	canonical	0	0	junction_1	14.0334422006862	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAACAAAAATTAAAAAAAA	8226	False	NA	NA	False	NA	NA	NA	121946338	121997099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121946379_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.20	chr9	+	3865	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	1	560	intron_retention	FALSE	canonical	0	0	junction_1	11.8183530742551	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	8301	False	NA	NA	False	NA	NA	NA	121946413	121997101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121947120_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.21	chr9	+	6254	5	NNC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	14752	560	intron_retention	FALSE	canonical	0	0	junction_4	12.5698050899765	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121961569	121997101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121961817_121965971_121966668_121986221_121989602_121992982_121993118_121995305
ES.36452.22	chr9	+	6072	5	ISM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	16554	1630	16105	597	3prime_fragment	FALSE	canonical	3	26	junction_3	4.7169905660283	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	121962922	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.3	chr9	+	3223	8	NNC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-8	597	intron_retention	FALSE	canonical	0	0	junction_3	11.7560232065377	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8228	False	NA	NA	False	NA	NA	NA	121946340	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_121946474_121960958_121961009_121961693_121961817_121966077_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.4	chr9	+	3328	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-7	597	intron_retention	FALSE	canonical	3	20	junction_3	6.34388666033558	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8229	False	NA	NA	False	NA	NA	NA	121946341	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.5	chr9	+	3417	9	FSM	ENSMUSG00000038145.18	ENSMUST00000134949.8	1664	9	-70	-1683	-6	597	multi-exon	FALSE	canonical	2	2	junction_3	11.6833214455479	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8230	False	NA	NA	False	NA	NA	NA	121946342	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121946474_121960958_121961009_121961693_121961817_121963052_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.6	chr9	+	3092	7	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-3	597	intron_retention	FALSE	canonical	0	0	junction_6	13.1328680120613	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8233	False	NA	NA	False	NA	NA	NA	121946345	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121995301
ES.36452.7	chr9	+	3196	7	FSM	ENSMUSG00000038145.18	ENSMUST00000118886.9	4811	7	-15	1630	2	597	multi-exon	FALSE	canonical	3	10	junction_2	9.08142181721685	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8238	False	NA	NA	False	NA	NA	NA	121946350	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_121946474_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.8	chr9	+	3432	9	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	5	597	intron_retention	FALSE	canonical	1	1	junction_3	11.9209636774885	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8241	False	NA	NA	False	NA	NA	NA	121946353	121997138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36452.9	chr9	+	3484	9	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	-6	560	intron_retention	FALSE	canonical	1	1	junction_1	13.8558426304574	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAATTAAAAAAAAAA	8247	False	NA	NA	False	NA	NA	NA	121946359	121997101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_121946569_121960958_121961009_121961693_121961817_121963026_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ES.36453.1	chr9	-	2626	13	NNC	ENSMUSG00000037949.9	novel	2653	13	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.7635573425642	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTGGCAAATGTTTCA	NA	False	NA	-2	True	ATTAAA	-32	NA	122123480	122004944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090707_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ES.36453.2	chr9	-	2601	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	33	19	-4	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCTTCTCCAAGACT	NA	False	NA	-16	True	ATTAAA	-18	NA	122123456	122004958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ES.36453.3	chr9	-	2724	15	NNC	ENSMUSG00000037949.9	novel	2653	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1464641864881	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCTTCTCCAAGACT	NA	False	NA	-16	True	ATTAAA	-18	NA	122123456	122004958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122005545_122010295_122010362_122011886_122011944_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ES.36453.4	chr9	-	150	1	Intergenic	novelGene_29633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAATAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122065189	122065039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122065000_122065200
ES.36454.1	chr9	-	2058	1	Intergenic	novelGene_29634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	122159757	122157699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122157700_122159800
ES.36455.1	chr9	-	159	1	Intergenic	novelGene_29635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	122175939	122175780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122175800_122175900
ES.36456.1	chr9	+	3175	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	-12	-6	-12	6	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCTGTGTGTTTTCTT	NA	False	NA	10	True	AATAAA	-23	NA	122180660	122210595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36456.2	chr9	+	1371	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	89	1697	-33	2	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGATTTTTCAGC	NA	False	NA	17	True	AATAAA	-22	NA	122180761	122208892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36456.3	chr9	+	2615	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	-33	-6	-33	6	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCTGTGTGTTTTCTT	NA	False	NA	10	True	AATAAA	-23	NA	122180761	122210595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36456.4	chr9	+	841	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	38	1697	-21	2	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGATTTTTCAGC	NA	False	NA	17	True	AATAAA	-22	NA	122180832	122208892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36456.5	chr9	+	2900	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCGTGGGTGAGCTGTG	NA	False	NA	1	True	AATAAA	-14	NA	122180840	122210586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36456.6	chr9	+	1277	7	NNC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.1333804808817	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGTGATTTTTCAGC	NA	False	NA	17	True	AATAAA	-22	NA	122180843	122208892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207883_122208074_122208592
ES.36456.7	chr9	+	3487	6	ISM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	173	1	-8	-1	intron_retention	FALSE	canonical	3	74	junction_5	14.0342438342791	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTGGGTGAGCTGTGTG	NA	False	NA	3	True	AATAAA	-16	NA	122180845	122210588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886
ES.36456.8	chr9	+	3425	7	NNC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	156	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.1692824191637	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122181009	122210589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122181510_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ES.36457.1	chr9	+	229	1	Intergenic	novelGene_29636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATTAGCCTTGGATAT	NA	False	NA	NA	False	NA	NA	NA	122382289	122382518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_122382300_122382500
ES.36458.1	chr9	+	252	1	Intergenic	novelGene_29637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAGCACTCAGGAGGC	NA	False	NA	NA	False	AAAAAG	-39	NA	122387506	122387758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_122387500_122387800
ES.36459.1	chr9	+	6102	1	Intergenic	novelGene_29638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTGTGACTCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	122490024	122496126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_122490000_122496100
ES.3646.1	chr10	-	159	1	Intergenic	novelGene_2789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGACTGCAATCCTCCA	NA	False	NA	NA	False	AATAAA	-9	NA	95368527	95368368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95368400_95368500
ES.36460.1	chr9	+	6099	1	Intergenic	novelGene_29639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCGTAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	122532797	122538896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_122532800_122538900
ES.36461.1	chr9	+	5374	20	NNC	ENSMUSG00000094985.3	novel	5030	20	NA	NA	-135	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.46425555192037	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAGAATAAAAATA	3773	False	NA	NA	False	NA	NA	NA	122576275	122631181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122576856_122577308_122579740_122586990_122587056_122588140_122588266_122596068_122596134_122600164_122600299_122603091_122603178_122603823_122603950_122604646_122604711_122609746_122609899_122610391_122610485_122614139_122614256_122617878_122617946_122619145_122619321_122620499_122620601_122624288_122624455_122625099_122625265_122626721_122626926_122628466_122628657_122630912
ES.36461.2	chr9	+	3062	2	ISM	ENSMUSG00000094985.3	ENSMUST00000178679.3	5030	20	52	50995	52	-20182	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTCCTGATAGCACTC	3960	False	NA	NA	False	AATAAA	-14	NA	122576462	122580205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122576628_122577308
ES.36461.3	chr9	+	172	1	Intergenic	novelGene_29641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAACAAACACT	NA	False	NA	NA	False	NA	NA	NA	122597553	122597725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_122597600_122597700
ES.36461.4	chr9	+	1668	1	NIC	ENSMUSG00000094985.3	novel	5030	20	NA	NA	19290	238	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTTGTGTGTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	122598957	122600625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122599000_122600600
ES.36462.1	chr9	-	178	1	Intergenic	novelGene_29640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTCTAAACATAG	NA	False	NA	NA	False	NA	NA	NA	122592999	122592821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122592800_122593000
ES.36463.1	chr9	-	176	1	Intergenic	novelGene_29642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	122601925	122601749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122601700_122601900
ES.36464.1	chr9	-	378	1	Intergenic	novelGene_29643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAAAAACCAAACCAT	NA	False	NA	NA	False	NA	NA	NA	122608720	122608342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122608300_122608700
ES.36464.2	chr9	-	154	1	Intergenic	novelGene_29644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	122608719	122608565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_122608600_122608700
ES.36465.1	chr9	+	2006	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	-12	1055	-12	-1048	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTCTCGCTCAGTAT	NA	False	NA	NA	False	AATAAA	-13	NA	122634591	122664344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.2	chr9	+	3168	11	NNC	ENSMUSG00000046603.17	novel	3049	11	NA	NA	-9	12	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	7.24499827467198	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCAGCTGCTGAGTTT	NA	False	NA	34	True	AATAAA	-34	NA	122634594	122665411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122634852_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.3	chr9	+	3060	11	NIC	ENSMUSG00000046603.17	novel	2909	11	NA	NA	3	13	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9.76933979345585	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAGCTGCTGAGTTTC	NA	False	NA	35	True	AATAAA	-35	NA	122634606	122665412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122634754_122637831_122637902_122640745_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.4	chr9	+	3046	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	3	0	3	0	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGTTCCAGGATTTCCA	NA	False	NA	22	True	AATAAA	-22	NA	122634606	122665399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.5	chr9	+	3260	12	NNC	ENSMUSG00000046603.17	novel	3049	11	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.8712097039312	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCGTTCCAGGATTT	NA	False	NA	19	True	AATAAA	-19	NA	122634607	122665396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122634754_122637831_122637902_122638818_122639037_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.6	chr9	+	2961	11	FSM	ENSMUSG00000046603.17	ENSMUST00000136274.3	2909	11	-48	-4	9	-3	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGCGTTCCAGGATTT	NA	False	NA	19	True	AATAAA	-19	NA	122634612	122665396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36465.7	chr9	+	3056	11	NNC	ENSMUSG00000046603.17	novel	2909	11	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	7.24499827467198	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCTGCGTTCCAGGAT	NA	False	NA	17	True	AATAAA	-17	NA	122634613	122665394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122634852_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ES.36466.1	chr9	-	11088	4	Fusion	ENSMUSG00000111325.2_ENSMUSG00000047036.9	novel	6189	7	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_1	57.2033410057684	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGAGCGGTCATGTTCT	NA	False	NA	NA	False	NA	NA	NA	122695056	122673592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_-_122683883_122686534_122686704_122690773_122691325_122694978
ES.36466.11	chr9	-	10169	5	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-22	-18	intron_retention	FALSE	non_canonical	0	0	junction_3	73.1825628138288	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695021	122677992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122686227_122686534_122688909_122691088_122691325_122694978
ES.36466.12	chr9	-	6297	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-21	-18	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	50.8254092184433	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695020	122677992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683110_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
ES.36466.13	chr9	-	6233	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	16	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.5326707689894	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695034	122677992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690759_122691410_122694978
ES.36466.14	chr9	-	8014	6	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	17	-18	intron_retention	FALSE	canonical	3	35	junction_5	53.3614092767423	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695033	122677992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.16	chr9	-	8504	5	NNC	ENSMUSG00000047036.9	novel	2961	6	NA	NA	-9	-20	intron_retention	FALSE	canonical	0	0	junction_4	68.6890639039433	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGGCCTCTGACATCT	NA	False	NA	-14	True	AATAAA	-15	NA	122695008	122677994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122686227_122686534_122686704_122690773_122691410_122694823
ES.36466.17	chr9	-	6271	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	3	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	60.3701545099526	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGGCCTCTGACATCT	NA	False	NA	-14	True	AATAAA	-15	NA	122694996	122677994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694801
ES.36466.18	chr9	-	6169	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	6	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.5411065549084	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATGGCCTCTGACATC	NA	False	NA	-15	True	AATAAA	-14	NA	122695044	122677995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691325_122694986
ES.36466.19	chr9	-	6358	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	13	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	63.5411065549084	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCATGGCCTCTGACAT	NA	False	NA	-16	True	AATAAA	-13	NA	122694986	122677996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694823
ES.36466.2	chr9	-	6244	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-3	-12	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGACATCTATATAATT	NA	False	NA	-6	True	AATAAA	-23	NA	122695053	122677986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
ES.36466.20	chr9	-	6297	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	17	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.3701545099526	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695033	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691518_122694978
ES.36466.21	chr9	-	6431	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	9	-47	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	63.2666315419643	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695062	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694801
ES.36466.22	chr9	-	6227	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-16	-47	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	47.6261482801202	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695015	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683110_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
ES.36466.23	chr9	-	6019	6	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	11	-47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	68.4146183209407	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695039	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122686131_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.24	chr9	-	6135	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	-9	-47	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	51.5999569336599	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695008	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683110_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.25	chr9	-	6189	7	NNC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	11	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.426263605599	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTAAATAAAAATAAAC	NA	False	NA	-41	True	NA	NA	NA	122695039	122678021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686221_122686534_122686704_122690773_122691410_122694978
ES.36466.28	chr9	-	5880	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	12	-312	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	54.6310859818433	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTCTGTCATATAA	NA	False	NA	NA	False	NA	NA	NA	122695038	122678286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.3	chr9	-	6505	6	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	12	-13	intron_retention	FALSE	canonical	3	118	junction_3	25.3929123969662	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGACATCTATATAAT	NA	False	NA	-7	True	AATAAA	-22	NA	122695038	122677987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122686227_122686534_122686704_122690773_122691410_122694978
ES.36466.4	chr9	-	6158	7	FSM	ENSMUSG00000047036.9	ENSMUST00000216063.2	6189	7	18	13	-3	-13	multi-exon	FALSE	canonical	3	35	junction_6	50.4669859082813	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGACATCTATATAAT	NA	False	NA	-7	True	AATAAA	-22	NA	122695053	122677987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.5	chr9	-	8390	5	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	8	-13	intron_retention	FALSE	canonical	3	118	junction_2	28.3405628031625	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTGACATCTATATAAT	NA	False	NA	-7	True	AATAAA	-22	NA	122695042	122677987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122686227_122686534_122686704_122690773_122691410_122694978
ES.36466.6	chr9	-	6355	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	10	-14	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	60.070560362146	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTCTGACATCTATATAA	NA	False	NA	-8	True	AATAAA	-21	NA	122694989	122677988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694801
ES.36466.7	chr9	-	6034	5	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	19	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	68.7509090848987	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTCTGACATCTATATAA	NA	False	NA	-8	True	AATAAA	-21	NA	122695031	122677988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122686534_122686704_122690773_122691410_122694978
ES.36466.8	chr9	-	6178	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	11	-15	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	54.6310859818433	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTCTGACATCTATATA	NA	False	NA	-9	True	AATAAA	-20	NA	122695039	122677989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691325_122694978
ES.36466.9	chr9	-	6265	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	6	-18	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	42.9434382518318	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCTGACATCTAT	NA	False	NA	-12	True	AATAAA	-17	NA	122695044	122677992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
ES.36467.1	chr9	+	5012	6	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1138	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.92574776766556	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCTCTCGTGTGTGTGT	NA	False	NA	10	True	NA	NA	NA	122715887	122727683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721844_122723756
ES.36467.2	chr9	+	2837	6	NNC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1139	1075	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.68328157299975	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTGTTCCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	122715888	122725540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721813_122723756
ES.36467.3	chr9	+	2233	5	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1153	548	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.26917420765551	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCCTTTGGTGACAGT	NA	False	NA	NA	False	NA	NA	NA	122715902	122725013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122723756
ES.36467.4	chr9	+	3517	1	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	4488	1075	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTGTTCCACAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	122722023	122725540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122722000_122725500
ES.36468.1	chr9	+	1970	4	NNC	ENSMUSG00000057895.12	novel	2010	4	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.4896335536171	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTTGTTTTAACTGT	4842	False	NA	9	True	AATAAA	-20	NA	122752104	122760091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122752284_122754142_122754362_122755374_122755520_122758664
ES.36468.2	chr9	+	2023	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	2	-15	-2	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTTGTTTTAACTGT	4859	False	NA	9	True	AATAAA	-20	NA	122752121	122760091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
ES.36468.3	chr9	+	2273	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	-15	-248	-15	248	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGAATTGAGTTTA	4859	False	NA	NA	False	TATAAA	-16	NA	122752121	122760341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
ES.36468.4	chr9	+	1864	4	NNC	ENSMUSG00000057895.12	novel	2010	4	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.743346594939	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTTGTTTTAACTGT	4883	False	NA	9	True	AATAAA	-20	NA	122752145	122760091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122752284_122754072_122754227_122755374_122755520_122758664
ES.36469.1	chr9	+	1787	1	NIC	ENSMUSG00000111163.2	novel	6329	2	NA	NA	579	-1344	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACAAGAATGCTATGAA	NA	False	NA	NA	False	NA	NA	NA	122765455	122767242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122765500_122767200
ES.3647.1	chr10	-	230	1	Intergenic	novelGene_2790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCTCTTCAAAGTACCA	NA	False	NA	NA	False	NA	NA	NA	95371972	95371742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95371700_95372000
ES.36470.1	chr9	+	5153	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	-282	-13	-282	13	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTTGTGTATGTACA	NA	False	NA	21	True	AATAAA	-31	NA	122779828	122847811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.13	chr9	+	4983	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	56.0093723935411	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTGTATAAATACTATG	NA	False	NA	5	True	AATAAA	-15	NA	122780137	122847795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842604_122842760_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.14	chr9	+	4888	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	56.1031557190204	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780138	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832464_122832531_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.15	chr9	+	4753	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	45.275546543186	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780138	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.16	chr9	+	4704	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	45.4300135820798	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780138	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.17	chr9	+	4972	36	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_30	55.2070241020477	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780138	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842604_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.18	chr9	+	4725	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	45.698697821194	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780138	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.2	chr9	+	4500	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	-4	362	-4	134	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCAGGTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	122780106	122847436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.20	chr9	+	5138	37	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	70.7265371381602	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACAATGTGTATAAA	NA	False	NA	-2	True	AATAAA	-8	NA	122780140	122847788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822106_122822285_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842604_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.21	chr9	+	4998	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	55.574373774323	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780140	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822106_122822285_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.22	chr9	+	4912	35	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_8	43.0773826927075	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780140	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808450_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.23	chr9	+	4753	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	44.9830802485837	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780140	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846709_122847132
ES.36470.24	chr9	+	4963	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_11	27.9664629273797	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780141	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.26	chr9	+	5121	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_29	57.432485216354	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780141	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842604_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.27	chr9	+	4071	30	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	31	6777	0	-2568	5prime_fragment	FALSE	canonical	3	157	junction_12	27.1815143171007	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTCATATTCTTTCAT	NA	False	NA	NA	False	TTTAAA	-15	NA	122780141	122841021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592
ES.36470.28	chr9	+	4786	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_16	43.9188560524408	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780141	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822948_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.3	chr9	+	4762	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	45.4819311442034	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATAAATACTATGC	NA	False	NA	6	True	AATAAA	-16	NA	122780106	122847796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.30	chr9	+	4521	33	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_32	45.964564731296	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780141	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122847132
ES.36470.32	chr9	+	4453	32	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	45.9676174305048	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATAAATACTATGC	NA	False	NA	6	True	AATAAA	-16	NA	122780141	122847796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.34	chr9	+	4999	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	63.1068675715558	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780141	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808450_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842380_122842469_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.35	chr9	+	7128	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	1	0	intron_retention	FALSE	canonical	3	157	junction_12	28.1465403178454	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780142	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.36	chr9	+	4820	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.7989839386756	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780145	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807119_122808541_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.37	chr9	+	9797	34	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_31	73.6748621147109	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780146	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122802166_122802285_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122843078_122843533_122843572_122845159_122845250_122846309_122846476_122846651_122846784_122847132
ES.36470.38	chr9	+	4541	30	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	37	6301	1	-2092	5prime_fragment	FALSE	canonical	3	157	junction_12	27.1815143171007	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTGTTGTCATGTC	NA	False	NA	NA	False	NA	NA	NA	122780147	122841497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592
ES.36470.4	chr9	+	1102	6	FSM	ENSMUSG00000036768.7	ENSMUST00000215176.2	1057	6	-40	-5	9	5	multi-exon	FALSE	canonical	3	187	junction_5	25.0391693152948	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCAATC	NA	False	NA	NA	False	NA	NA	NA	122780119	122801415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753
ES.36470.40	chr9	+	6971	33	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	75.2244493063093	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780147	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806915_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822948_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830111_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.42	chr9	+	5049	37	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	63.1120586294287	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780149	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842380_122842469_122842604_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.43	chr9	+	4742	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.4817084639218	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780150	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792617_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815569_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.44	chr9	+	5044	36	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_30	62.8510646411866	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780150	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808450_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842604_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.45	chr9	+	5184	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_30	54.6977893818873	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780150	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842380_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.46	chr9	+	4781	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	45.1956530965482	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780151	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846448_122846651_122846784_122847132
ES.36470.47	chr9	+	4860	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	55.7779123865718	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTGTATAAATACTATG	NA	False	NA	5	True	AATAAA	-15	NA	122780151	122847795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822106_122822153_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.48	chr9	+	4502	32	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	45.3753911126552	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACAATGTGTATAAA	NA	False	NA	-2	True	AATAAA	-8	NA	122780152	122847788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.49	chr9	+	5082	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_33	56.57741121868	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780152	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122845159_122845250_122846309_122846784_122847132
ES.36470.5	chr9	+	5372	33	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-6	0	intron_retention	FALSE	canonical	1	2	junction_5	45.8506300222527	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780123	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.50	chr9	+	7511	34	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	4	0	intron_retention	FALSE	canonical	1	7	junction_16	44.3655820073435	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780154	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822948_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122846476_122846651_122846784_122847132
ES.36470.53	chr9	+	6340	34	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	57.3939233944492	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780158	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821492_122821695_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.54	chr9	+	4900	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	55.5080872945739	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACTATGCCTTTGTG	NA	False	NA	13	True	AATAAA	-23	NA	122780161	122847803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842380_122842469_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.57	chr9	+	4518	32	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	12432	8	-50	0	3prime_fragment	FALSE	canonical	3	157	junction_9	26.6660856683152	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122792542	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.58	chr9	+	6732	30	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-8100	0	intron_retention	FALSE	canonical	0	0	junction_20	68.1784571650246	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122800757	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822948_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122831416_122831491_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.59	chr9	+	4377	30	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-4144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	69.2337026930166	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122804713	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826526_122826597_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840707_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.6	chr9	+	5019	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	157	junction_12	28.1508464545299	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATAAATACTATGC	NA	False	NA	6	True	AATAAA	-16	NA	122780123	122847796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846784_122847132
ES.36470.60	chr9	+	4418	31	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-4143	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	76.0195954270272	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122804714	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822106_122822153_122822907_122823106_122824780_122824889_122825355_122825462_122826526_122826597_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.62	chr9	+	3426	19	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	41806	364	2345	132	3prime_fragment	FALSE	canonical	3	159	junction_5	27.7027876655842	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTAGTCAGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	122821916	122847434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.63	chr9	+	3941	9	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-4721	0	intron_retention	FALSE	canonical	0	0	junction_3	79.1971432565595	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122833734	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122833759_122836378_122836526_122838381_122838484_122838808_122838990_122840592_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.64	chr9	+	5062	6	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-160	120	intron_retention	FALSE	canonical	1	2	junction_3	96.7710700571199	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCTCTGGTGAATTCT	NA	False	NA	NA	False	NA	NA	NA	122838295	122847422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122838484_122838824_122843078_122843533_122843572_122846314_122846476_122846651_122846784_122847132
ES.36470.65	chr9	+	1271	7	NIC	ENSMUSG00000036768.7	novel	669	6	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	110.82819536963	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122840750	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122840813_122842604_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.66	chr9	+	3017	6	ISM	ENSMUSG00000036768.7	ENSMUST00000216048.2	843	8	1818	-487	81	-1	3prime_fragment	FALSE	canonical	2	8	junction_1	93.2600664807827	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACAATGTGTATAAAT	NA	False	NA	-1	True	AATAAA	-9	NA	122840795	122847789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122842747_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.67	chr9	+	5723	3	NIC	ENSMUSG00000036768.7	novel	1546	7	NA	NA	548	0	intron_retention	FALSE	canonical	3	231	junction_2	20	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122841262	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122843078_122843533_122846784_122847132
ES.36470.68	chr9	+	4344	5	NNC	ENSMUSG00000036768.7	novel	669	6	NA	NA	691	0	intron_retention	FALSE	canonical	0	0	junction_2	105.155539559264	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122841405	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122843078_122843533_122845250_122846309_122846476_122846651_122846784_122847132
ES.36470.69	chr9	+	4303	4	NIC	ENSMUSG00000036768.7	novel	669	6	NA	NA	-247	14	intron_retention	FALSE	canonical	3	211	junction_2	24.9443825784929	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTTGTGTATGTACAT	NA	False	NA	22	True	AATAAA	-32	NA	122842528	122847812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122843078_122843533_122846476_122846651_122846784_122847132
ES.36470.7	chr9	+	4867	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.7647926526978	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122780129	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815508_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122831452_122831491_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.70	chr9	+	996	4	ISM	ENSMUSG00000036768.7	ENSMUST00000216062.2	669	6	2817	-496	756	0	3prime_fragment	FALSE	canonical	3	211	junction_2	9.42809041582063	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122843531	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122843572_122846309_122846476_122846651_122846784_122847132
ES.36470.71	chr9	+	3358	3	NNC	ENSMUSG00000036768.7	novel	669	6	NA	NA	1238	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122844013	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122846476_122846545_122846784_122847132
ES.36470.72	chr9	+	2341	1	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	-1033	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	False	NA	0	True	AATAAA	-10	NA	122845449	122847790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122845400_122847800
ES.36470.73	chr9	+	989	3	NNC	ENSMUSG00000036768.7	novel	752	2	NA	NA	-129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.5	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACAATGTGTATAAAT	NA	False	NA	-1	True	AATAAA	-9	NA	122846353	122847789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122846448_122846545_122846784_122847132
ES.36470.8	chr9	+	4948	36	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	55.7028266604055	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780129	122847798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122846878_122846988_122847132
ES.36470.9	chr9	+	4790	35	NNC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	79.178988903225	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTATGCCTTTGTGTAT	NA	False	NA	16	True	AATAAA	-26	NA	122780129	122847806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822948_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122842380_122842469_122843004_122843078_122843533_122843572_122846309_122846476_122846657_122846784_122847132
ES.36471.1	chr9	-	2355	1	Genic_Genomic	ENSMUSG00000032551.8	novel	NA	NA	NA	NA	4022	512	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGAACACAACAAAGATG	NA	False	NA	NA	False	NA	NA	NA	122775996	122773641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_122773600_122776000
ES.36471.2	chr9	-	1921	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	7	1433	7	1013	multi-exon	FALSE	canonical	3	36	junction_2	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATTTGTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	122780058	122775586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122777174_122777989_122778135_122779869
ES.36471.3	chr9	-	923	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	-15	2453	-15	-7	multi-exon	FALSE	canonical	3	36	junction_2	10	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATCTGTCTTAGTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	122780080	122776606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122777174_122777989_122778135_122779869
ES.36471.4	chr9	-	2633	2	ISM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	10	2453	10	-7	intron_retention	FALSE	canonical	3	56	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATCTGTCTTAGTCA	NA	False	NA	NA	False	ATTAAA	-20	NA	122780055	122776606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_122777174_122777989
ES.36471.5	chr9	-	1021	4	NNC	ENSMUSG00000032551.8	novel	3361	3	NA	NA	24	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.9401019444583	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGATCTGTCTTAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	122779994	122776608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122777174_122777989_122778135_122778697_122778884_122779869
ES.36472.1	chr9	-	7078	1	Antisense	novelGene_ENSMUSG00000036768.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGATTACTTATAATAC	NA	False	NA	NA	False	NA	NA	NA	122790944	122783866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_122783900_122790900
ES.36472.2	chr9	-	2791	1	Antisense	novelGene_ENSMUSG00000036768.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGGGATCTATAAGGAT	NA	False	NA	NA	False	NA	NA	NA	122790944	122788153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_122788200_122790900
ES.36472.3	chr9	-	2143	2	Antisense	novelGene_ENSMUSG00000036768.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGGGATCTATAAGGAT	NA	False	NA	NA	False	NA	NA	NA	122790943	122788153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_122788223_122788869
ES.36473.1	chr9	+	1278	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	-235	-2	-235	2	multi-exon	FALSE	canonical	3	26	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGATATGGAATTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	122850155	122852554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122850636_122851230_122851378_122851903
ES.36474.1	chr9	+	2685	1	Antisense	novelGene_ENSMUSG00000025786.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAAACTGGTTCAGCCC	2705	False	NA	NA	False	NA	NA	NA	122925811	122928496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_+_122925800_122928500
ES.36475.1	chr9	+	1052	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	0	1	0	1	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	NA	False	NA	14	True	AATAAA	-19	NA	122942279	122965193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.10	chr9	+	850	7	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	507.268639107744	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942310	122965188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122942388_122947955_122948058_122948305_122948401_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.11	chr9	+	2217	8	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	475.769065915001	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	NA	False	NA	14	True	AATAAA	-19	NA	122942310	122965193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122942388_122947955_122948058_122948305_122949597_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.12	chr9	+	1922	2	ISM	ENSMUSG00000025785.6	ENSMUST00000159376.2	711	3	-12	-951	-1	951	intron_retention	FALSE	canonical	3	1418	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTAGTCCATCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	122942310	122949800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_122942388_122947955
ES.36475.13	chr9	+	925	7	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	28	junction_2	501.759044650805	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	NA	False	NA	13	True	AATAAA	-18	NA	122942310	122965192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122942388_122947955_122948058_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.14	chr9	+	651	5	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	597.093533292733	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942312	122965188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122942388_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.15	chr9	+	906	4	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	1	951	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	631.266099904699	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTAGTCCATCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	122942312	122949800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122942388_122947955_122948058_122948305_122948401_122949166
ES.36475.16	chr9	+	1239	7	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1140	junction_3	111.424737927546	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTGGTGTTGTTAGC	NA	False	NA	9	True	AATAAA	-14	NA	122942319	122965188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122960016_122960949_122961106_122964963
ES.36475.17	chr9	+	1324	6	NNC	ENSMUSG00000025785.6	novel	1107	5	NA	NA	6421	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	542.714805399668	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	NA	False	NA	14	True	AATAAA	-19	NA	122948787	122965193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122949365_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.18	chr9	+	3813	5	FSM	ENSMUSG00000025785.6	ENSMUST00000214741.2	1107	5	-2706	0	-1646	0	multi-exon	FALSE	canonical	3	1267	junction_1	78.9600373606801	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	2725	False	NA	13	True	AATAAA	-18	NA	122953803	122965192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.19	chr9	+	3410	4	NIC	ENSMUSG00000025785.6	novel	1107	5	NA	NA	250	1	intron_retention	FALSE	canonical	3	1314	junction_3	73.8286303995047	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	5681	False	NA	14	True	AATAAA	-19	NA	122956759	122965193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.3	chr9	+	2122	9	NNC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	585.567980148334	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGGTGTTGTTAGCAT	NA	False	NA	11	True	AATAAA	-16	NA	122942299	122965190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_122942388_122947955_122948058_122948305_122949365_122955661_122955791_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ES.36475.4	chr9	+	1632	10	Fusion	ENSMUSG00000025785.6_ENSMUSG00000025784.6	novel	1053	8	NA	NA	-7	-10	multi-exon	FALSE	canonical	2	2	junction_8	624.622394573289	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTGAAGTTGGGGGCT	NA	False	NA	NA	False	AATAAA	-11	NA	122942299	122986487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122980162_122980218_122983481_122983581_122985811
ES.36475.7	chr9	+	1683	3	FSM	ENSMUSG00000025785.6	ENSMUST00000159376.2	711	3	-21	-951	-5	951	multi-exon	FALSE	canonical	3	1248	junction_2	85	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTAGTCCATCTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	122942301	122949800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_122942388_122947955_122948058_122948305
ES.36475.9	chr9	+	1955	7	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1140	junction_3	84.9164622176145	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	NA	False	NA	13	True	AATAAA	-18	NA	122942309	122965192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122961106_122964963
ES.36476.1	chr9	-	7622	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-52	-2194	5	2194	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	8719	False	NA	NA	False	NA	NA	NA	122942264	122893030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.10	chr9	-	4653	6	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	-11	-642	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	132.023331271408	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8727	False	NA	NA	False	AATAAA	-13	NA	122942256	122895866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
ES.36476.12	chr9	-	4807	8	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	-2	-642	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	123.273050168961	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8750	False	NA	NA	False	AATAAA	-13	NA	122942233	122895866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ES.36476.14	chr9	-	5195	8	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	-150	-644	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	132.6022131745	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGGGGTCCAGCTTT	8563	False	NA	NA	False	AATAAA	-11	NA	122942420	122895868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122941498_122941754_122942060
ES.36476.15	chr9	-	4442	6	NIC	ENSMUSG00000025786.18	novel	5380	7	NA	NA	-7	-644	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	129.566353657113	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGGGGTCCAGCTTT	8731	False	NA	NA	False	AATAAA	-11	NA	122942252	122895868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122942060
ES.36476.16	chr9	-	3818	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-28	1586	3	-1586	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTGTGTACTGAGT	8743	False	NA	NA	False	AATACA	-12	NA	122942240	122896810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.17	chr9	-	7003	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	-4	-12	-4	12	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTGTATAGTTGGTTC	8709	False	NA	NA	False	NA	NA	NA	122942274	122901362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.18	chr9	-	6649	7	NIC	ENSMUSG00000025786.18	novel	6987	7	NA	NA	-11	-353	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	97.6774738048077	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTCTCTTTTAAGAAA	8702	False	NA	NA	False	GATAAA	-27	NA	122942281	122901727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
ES.36476.19	chr9	-	5141	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	13	1833	-12	-1833	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGAGTCTGTGC	8726	False	NA	0	True	AATACA	-27	NA	122942257	122903207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.2	chr9	-	5443	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-66	-1	-8	1	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCAGAATCTGTTCTT	8705	False	NA	NA	False	NA	NA	NA	122942278	122895223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.20	chr9	-	5300	8	NIC	ENSMUSG00000025786.18	novel	1727	8	NA	NA	-12	-1834	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	123.125786022561	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGTGAGTCTGTG	8726	False	NA	-1	True	AATACA	-26	NA	122942257	122903208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122920041_122920198_122929323_122929658_122942060
ES.36476.21	chr9	-	5016	6	FSM	ENSMUSG00000025786.18	ENSMUST00000155778.8	1633	6	-34	-3349	4	-1841	multi-exon	FALSE	canonical	3	7	junction_4	109.405667129267	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTACTTTGGTTGTGA	8718	False	NA	-8	True	AATACA	-19	NA	122942265	122903215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
ES.36476.22	chr9	-	5011	7	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	1	-1844	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	123.676661770387	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAGTACTTTGGTTG	8772	False	NA	-11	True	AATACA	-16	NA	122942211	122903218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122927987_122928040_122929327_122929658_122942060
ES.36476.23	chr9	-	5199	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	-29	-2678	-4	-1844	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAGTACTTTGGTTG	8709	False	NA	-11	True	AATACA	-16	NA	122942274	122903218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ES.36476.24	chr9	-	4919	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	-8	2076	-8	-2076	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGTGATGGAGTTCAG	8705	False	NA	NA	False	AATAAA	-20	NA	122942278	122903450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.25	chr9	-	5029	9	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	3	-2079	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	126.577051632593	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGGGGTGATGGAGTT	8800	False	NA	NA	False	AATAAA	-17	NA	122942183	122903453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122920041_122920198_122927987_122928040_122929327_122929658_122942060
ES.36476.3	chr9	-	5351	7	NIC	ENSMUSG00000025786.18	novel	5380	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	138.49147587086	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCAGAATCTGTTCT	8727	False	NA	NA	False	NA	NA	NA	122942256	122895224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122927987_122928040_122929323_122929658_122942060
ES.36476.31	chr9	-	2574	9	NNC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	127.420992677816	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8783	False	NA	-1	True	AATAAA	-16	NA	122942200	122905896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122918757_122918885_122927987_122928040_122929327_122929658_122942060
ES.36476.33	chr9	-	2199	8	NNC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.6727146324575	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTGCTCTGCTCTCTC	8738	False	NA	-3	True	AATAAA	-14	NA	122942245	122905898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122906641_122906879_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.37	chr9	-	1798	7	NIC	ENSMUSG00000025786.18	novel	6987	7	NA	NA	-1	21	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	97.6774738048077	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAATTTCAGGCAAGC	8737	False	NA	NA	False	NA	NA	NA	122942246	122906543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
ES.36476.38	chr9	-	1928	8	NIC	ENSMUSG00000025786.18	novel	1727	8	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	121.130053231716	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCTTATACAATCA	8733	False	NA	NA	False	NA	NA	NA	122942250	122906569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122920041_122920198_122929327_122929658_122942060
ES.36476.39	chr9	-	1785	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	34	673	1	-5	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCTTATACAATCA	8772	False	NA	NA	False	NA	NA	NA	122942211	122906569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ES.36476.4	chr9	-	5456	8	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	123.273050168961	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCAGAATCTGTTCT	8743	False	NA	NA	False	NA	NA	NA	122942240	122895224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ES.36476.40	chr9	-	1372	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	-12	5627	-12	103	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCCTCTCTGCTCT	8701	False	NA	39	True	TTTAAA	-15	NA	122942282	122907001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.41	chr9	-	1397	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	-12	1107	-12	101	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTTTCCTCTCTGCT	8726	False	NA	37	True	TTTAAA	-13	NA	122942257	122907003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ES.36476.42	chr9	-	1427	8	NIC	ENSMUSG00000025786.18	novel	1727	8	NA	NA	-5	48	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	121.130053231716	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTTTGATGACTGGA	8747	False	NA	-16	True	AAAAAG	-37	NA	122942236	122907056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122920041_122920198_122929327_122929658_122942060
ES.36476.43	chr9	-	1501	8	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	-12	2	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	122.011039982253	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCTCATGTT	8726	False	NA	-62	True	NA	NA	NA	122942257	122907102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122941498_122941754_122942060
ES.36476.44	chr9	-	1238	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	21	5728	-4	2	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTCCTCATGTT	8734	False	NA	-62	True	NA	NA	NA	122942249	122907102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.5	chr9	-	5326	7	NNC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	124.71924025141	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCAGAATCTGTTCT	9052	False	NA	NA	False	NA	NA	NA	122941931	122895224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122941829
ES.36476.6	chr9	-	5249	6	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	132.023331271408	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCAGAATCTGTTCT	8773	False	NA	NA	False	NA	NA	NA	122942210	122895224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
ES.36476.7	chr9	-	5224	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-62	214	-4	-214	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTGTTGTTGTTTG	8709	False	NA	NA	False	NA	NA	NA	122942274	122895438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.8	chr9	-	4949	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-215	642	-157	-642	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8556	False	NA	NA	False	AATAAA	-13	NA	122942427	122895866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ES.36476.9	chr9	-	4686	7	NIC	ENSMUSG00000025786.18	novel	5380	7	NA	NA	-2	-642	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	138.49147587086	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8750	False	NA	NA	False	AATAAA	-13	NA	122942233	122895866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122927987_122928040_122929323_122929658_122942060
ES.36477.1	chr9	-	5273	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	34	3	-5	-3	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATGTTCATTTGTTT	6365	False	NA	NA	False	AATAAA	-15	NA	123045069	122999891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
ES.36477.2	chr9	-	3699	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	-7	1618	-7	-1618	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAATTCCAGAACTTGG	6324	False	NA	NA	False	NA	NA	NA	123045110	123001506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
ES.36477.3	chr9	-	3538	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	33	1739	-6	-1739	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCTGCCTTGTGTGGTA	6364	False	NA	NA	False	NA	NA	NA	123045070	123001627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
ES.36478.1	chr9	-	1808	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	-99	3	-99	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTATGTTTCCTTTA	NA	False	NA	0	True	AATACA	-16	NA	123089928	123088120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123088100_123089900
ES.36479.1	chr9	-	155	1	Intergenic	novelGene_29645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	123163555	123163400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123163400_123163600
ES.3648.1	chr10	-	3324	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-92	-22	-92	22	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGCCTGTTTTCATCTT	NA	False	NA	1	True	AATAAA	-38	NA	95400100	95382846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ES.3648.10	chr10	-	3116	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-92	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	296.277167530676	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTTATTTTTAGT	NA	False	NA	-23	True	AATAAA	-14	NA	95400100	95382870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523_95399743_95399929
ES.3648.14	chr10	-	3043	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-32	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	267.311354042435	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTATGTTTATTTTT	NA	False	NA	-26	True	AATAAA	-11	NA	95400040	95382873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399744_95399937
ES.3648.15	chr10	-	3184	1	NIC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	13951	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTATGTTTATTTTT	NA	False	NA	-26	True	AATAAA	-11	NA	95386057	95382873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_95382900_95386100
ES.3648.17	chr10	-	3092	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-85	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	267.311354042435	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATGGAAACAACCTCT	NA	False	NA	-40	True	NA	NA	NA	95400093	95382887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399746_95399929
ES.3648.18	chr10	-	4629	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-50	-22	intron_retention	FALSE	non_canonical	2	23	junction_4	288.485159930281	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATGGAAACAACC	NA	False	NA	-43	True	NA	NA	NA	95400058	95382890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95387356_95388347_95388459_95399523_95399741_95399937
ES.3648.23	chr10	-	2302	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-33	-744	at_least_one_novel_splicesite	FALSE	non_canonical	2	23	junction_5	258.581824573963	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGGGTTTGTATGTA	NA	False	NA	NA	False	AATAAA	-11	NA	95400041	95383612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399741_95399937
ES.3648.24	chr10	-	2334	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	2	874	2	-874	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCACAGATTGTCATTC	NA	False	NA	NA	False	AAGAAA	-11	NA	95400006	95383742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ES.3648.25	chr10	-	1895	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-63	-1381	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACACTGTCTTGAGGGTC	NA	False	NA	NA	False	ACTAAA	-22	NA	95400071	95384249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
ES.3648.27	chr10	-	954	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-26	-2088	at_least_one_novel_splicesite	FALSE	non_canonical	2	23	junction_5	289.333302611366	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATGTGGAATTTTTT	NA	False	NA	-2	True	AATAAA	-33	NA	95400034	95384956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523_95399741_95399937
ES.3648.28	chr10	-	1183	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	-62	2089	-62	-2089	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCATGTGGAATTTTT	NA	False	NA	-3	True	AATAAA	-32	NA	95400070	95384957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ES.3648.29	chr10	-	945	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-50	-2128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	267.311354042435	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAACAAAATAGC	NA	False	NA	-42	True	NA	NA	NA	95400058	95384996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399739_95399925
ES.3648.3	chr10	-	2959	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-21	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	267.311354042435	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTATTTTTAGTTTAAG	NA	False	NA	-18	True	AATAAA	-19	NA	95400029	95382865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399725_95399999
ES.3648.4	chr10	-	3321	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-75	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	287.849244397132	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTATTTTTAGTTTAAG	NA	False	NA	-18	True	AATAAA	-19	NA	95400083	95382865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388492_95399523
ES.3648.5	chr10	-	3237	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	287.849244397132	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400042	95382868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399530
ES.3648.9	chr10	-	2964	6	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	267.311354042435	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTTTATTTTTAGT	NA	False	NA	-23	True	AATAAA	-14	NA	95400001	95382870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523_95399743_95399979
ES.36480.1	chr9	+	2114	15	NNC	ENSMUSG00000035202.9	novel	3894	21	NA	NA	0	-15793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.9759066045322	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTGTTTCTTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	123195991	123274865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265400_123265466_123267199_123267299_123270528_123270667_123274488
ES.36480.2	chr9	+	6879	1	FSM	ENSMUSG00000035202.9	ENSMUST00000215674.2	1598	1	-2	-5279	1	-1302	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCATTGGTCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	123195992	123202871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123196000_123202900
ES.36480.3	chr9	+	2121	2	FSM	ENSMUSG00000035202.9	ENSMUST00000214074.2	3415	2	-10	1304	7	-1304	multi-exon	FALSE	canonical	3	60	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCATTGGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	123196001	123202869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123196173_123200919
ES.36480.4	chr9	+	2060	14	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	18	20941	-2	-19870	5prime_fragment	FALSE	canonical	3	28	junction_9	7.36776924642996	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCATTGTAGGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	123196009	123270788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528
ES.36480.5	chr9	+	6134	14	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	20	16865	0	-15794	5prime_fragment	FALSE	canonical	3	28	junction_9	7.36776924642996	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGTTGTTTCTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	123196011	123274864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528
ES.36480.6	chr9	+	6150	1	Intergenic	novelGene_29646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123231444	123237594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_123231400_123237600
ES.36481.1	chr9	-	3979	1	Antisense	novelGene_ENSMUSG00000035202.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	123204328	123200349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_123200300_123204300
ES.36482.1	chr9	+	4940	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	-85	-7	-85	7	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTTCTTTGACTGTT	NA	False	NA	14	True	AATAAA	-30	NA	123307685	123350624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ES.36482.2	chr9	+	9336	1	Genic_Genomic	ENSMUSG00000025239.4	novel	NA	NA	NA	NA	-24	-28791	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATCATTGAGACCTTG	NA	False	NA	NA	False	NA	NA	NA	123307746	123317082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_+_123307700_123317100
ES.36482.3	chr9	+	4390	9	NNC	ENSMUSG00000025239.4	novel	4848	8	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	12.852528934027	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCCCAAGACTGTCTTC	NA	False	NA	4	True	AATAAA	-20	NA	123307756	123350614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170_123349781_123350249
ES.36482.4	chr9	+	4952	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	5	-109	5	109	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGGATTTTAAATGTTC	NA	False	NA	NA	False	AATAAA	-21	NA	123307775	123350726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ES.36482.5	chr9	+	223	1	Intergenic	novelGene_29647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATTTCCCCCTAGAAGA	NA	False	NA	NA	False	TTTAAA	-17	NA	123326671	123326894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_123326700_123326900
ES.36482.6	chr9	+	151	1	Intergenic	novelGene_29648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	123343273	123343424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_123343300_123343400
ES.36483.1	chr9	-	3522	1	Intergenic	novelGene_29649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAAGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	123358631	123355109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123355100_123358600
ES.36484.1	chr9	+	3601	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	-41	-2	-41	2	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTACTGTTTCTCT	NA	False	NA	21	True	AATAAA	-22	NA	123358782	123421667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.10	chr9	+	2318	7	NIC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	107.282726164716	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358854	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123358987_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.11	chr9	+	4005	20	NNC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	37	480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	65.5828756109947	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTTTTTTGTTTTTAA	NA	False	NA	NA	False	TTTAAA	-7	NA	123358860	123422145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398079_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.12	chr9	+	2014	19	NNC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	37	57	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	67.2708042995705	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAGAAATCTATTCA	NA	False	NA	NA	False	ATTAAA	-24	NA	123358860	123420258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123381704_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.13	chr9	+	3189	2	NNC	ENSMUSG00000025240.11	novel	374	4	NA	NA	37	-17096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCATCTTAACTATATG	NA	False	NA	NA	False	AATATA	-14	NA	123358860	123364723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123362026_123364699
ES.36484.14	chr9	+	3394	1	NIC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	38	-19564	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGTACCTCTTGC	NA	False	NA	NA	False	AATAAA	-40	NA	123358861	123362255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123358900_123362300
ES.36484.15	chr9	+	3496	20	NNC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	65.5828756109947	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358880	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398079_123399020_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.16	chr9	+	3271	19	NNC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	66.2116882002037	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358881	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123381831_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.17	chr9	+	6695	19	NIC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	209	junction_13	25.3630430078349	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGCTGTTGGTACTGTT	NA	False	NA	16	True	AATAAA	-17	NA	123358883	123421662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.18	chr9	+	3480	20	NNC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.5802145691541	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGCTGTTGGTACTGTT	NA	False	NA	16	True	AATAAA	-17	NA	123358892	123421662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388344_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.19	chr9	+	3171	1	NIC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	-7	-19753	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATATATACATACATCAG	NA	False	NA	NA	False	NA	NA	NA	123358895	123362066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123358900_123362100
ES.36484.22	chr9	+	2948	15	NNC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	-27014	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.1060524030616	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123388288	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123388350_123389630_123389665_123395450_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.23	chr9	+	4854	12	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	36936	-2	-19420	0	3prime_fragment	FALSE	canonical	3	209	junction_6	27.5561035521208	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	123395882	123421665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_+_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.24	chr9	+	7491	6	NIC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	-6456	0	intron_retention	FALSE	canonical	3	266	junction_4	16.5529453572468	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123408846	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.4	chr9	+	3441	19	NIC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65.6050895722106	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358840	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_+_123358987_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.5	chr9	+	3528	19	NNC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	66.8058962800274	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACCGCTGTTGGTACTG	NA	False	NA	14	True	AATAAA	-15	NA	123358841	123421660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388355_123395433_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.6	chr9	+	2135	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	18	1405	18	59	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGAAATCTATTCACT	NA	False	NA	NA	False	ATTAAA	-26	NA	123358841	123420260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.7	chr9	+	3526	20	NNC	ENSMUSG00000025240.11	novel	3433	20	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.4011698625535	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358842	123421663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411323_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36484.8	chr9	+	3581	21	NNC	ENSMUSG00000025240.11	novel	3558	20	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.5217935631174	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGCTGTTGGTACTGTT	NA	False	NA	16	True	AATAAA	-17	NA	123358847	123421662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_123358987_123368638_123368689_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ES.36485.1	chr9	-	2137	1	Intergenic	novelGene_29650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAGTATTGAAAACTTGCA	NA	False	NA	NA	False	NA	NA	NA	123369852	123367715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123367700_123369900
ES.36486.1	chr9	-	154	1	Intergenic	novelGene_29651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	123416029	123415875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123415900_123416000
ES.36487.1	chr9	-	5365	2	Intergenic	novelGene_29652	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGAAAGGATGGGGGAA	9838	False	NA	NA	False	NA	NA	NA	123519753	123512963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123517926_123519350
ES.36487.2	chr9	-	4448	2	Intergenic	novelGene_29653	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTACAAAACTCCT	7777	False	NA	NA	False	NA	NA	NA	123521814	123515941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123517926_123519350
ES.36487.3	chr9	-	1364	1	FSM	ENSMUSG00000058922.8	ENSMUST00000168019.2	960	1	-78	-326	-78	326	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTGTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	123519335	123517971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123518000_123519300
ES.36488.1	chr9	-	4306	2	ISM	ENSMUSG00000025245.15	ENSMUST00000168921.2	739	7	11652	-4151	7196	1110	3prime_fragment	FALSE	canonical	3	95	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCATTGCATCTTTTAC	NA	False	NA	NA	False	NA	NA	NA	123530038	123524966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_123529169_123529934
ES.36488.10	chr9	-	1874	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	26	2170	-17	871	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGACGCCTACAATGT	NA	False	NA	NA	False	TATAAA	-13	NA	123546664	123528246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.11	chr9	-	1421	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	6	2643	6	398	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTAATTTATCTAATC	NA	False	NA	0	True	AATAAA	-18	NA	123546684	123528719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.12	chr9	-	1238	9	FSM	ENSMUSG00000025245.15	ENSMUST00000165754.8	6541	9	64	5239	-8	398	multi-exon	FALSE	canonical	1	4	junction_8	33.4168744798193	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTAATTTATCTAATC	NA	False	NA	0	True	AATAAA	-18	NA	123546626	123528719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123546590
ES.36488.14	chr9	-	2766	9	NIC	ENSMUSG00000025245.15	novel	4070	10	NA	NA	-8	391	intron_retention	FALSE	canonical	3	87	junction_8	8.92941067484299	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACGAAATCTTAATTTA	NA	False	NA	-7	True	AATAAA	-11	NA	123546626	123528726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.15	chr9	-	4104	7	NIC	ENSMUSG00000025245.15	novel	4070	10	NA	NA	2145	391	intron_retention	FALSE	canonical	3	93	junction_4	6.3879226322456	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACGAAATCTTAATTTA	NA	False	NA	-7	True	AATAAA	-11	NA	123544448	123528726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123540162_123541494_123541690_123544364
ES.36488.16	chr9	-	1101	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	69	2900	-3	141	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAATGATTCT	NA	False	NA	NA	False	NA	NA	NA	123546621	123528976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.2	chr9	-	3715	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	44	311	1	-311	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCACCTGTTTATGTGA	NA	False	NA	NA	False	ATTAAA	-9	NA	123546646	123526387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.3	chr9	-	3533	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	3	534	3	-534	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTGTGTCCTGAGCTT	NA	False	NA	NA	False	TATAAA	-34	NA	123546687	123526610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.4	chr9	-	1525	11	NNC	ENSMUSG00000025245.15	novel	4070	10	NA	NA	-7	-552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.6965600511886	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTGGTTATGCATAAG	NA	False	NA	NA	False	TATAAA	-16	NA	123546625	123526628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123527162_123529085_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544486_123546590
ES.36488.5	chr9	-	3290	9	FSM	ENSMUSG00000025245.15	ENSMUST00000165754.8	6541	9	72	3179	0	-583	multi-exon	FALSE	canonical	1	4	junction_8	33.4168744798193	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATTAGATTATAAAACTT	NA	False	NA	NA	False	ATTAAA	-16	NA	123546618	123526659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123546590
ES.36488.6	chr9	-	3360	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	60	650	-12	-650	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCACTTTGATAAACT	NA	False	NA	NA	False	TTTAAA	-37	NA	123546630	123526726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.7	chr9	-	3179	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	64	827	-8	-827	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTTCAATTTTGTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	123546626	123526903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.8	chr9	-	4584	9	NIC	ENSMUSG00000025245.15	novel	4070	10	NA	NA	-7	-831	intron_retention	FALSE	canonical	3	87	junction_8	8.92941067484299	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGCCTTCAATTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	123546625	123526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123540162_123541494_123541690_123544364_123544490_123546590
ES.36488.9	chr9	-	1354	11	NNC	ENSMUSG00000025245.15	novel	4070	10	NA	NA	-7	-1342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	40.7008599417752	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGTTAAGTAGTAAG	NA	False	NA	NA	False	AATAAA	-24	NA	123546625	123527418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123527779_123529085_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540160_123541494_123541690_123544364_123544490_123546590
ES.36489.1	chr9	+	159	1	Intergenic	novelGene_29654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	123662746	123662905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_+_123662700_123662900
ES.3649.1	chr10	+	218	1	Intergenic	novelGene_2791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAATTGCTTTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	95487403	95487621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95487400_95487600
ES.36490.1	chr9	-	7481	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTGTCTTTTATTCCTC	9310	False	NA	2	True	AATAAA	-24	NA	123680964	123618565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620853_123621072_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.10	chr9	-	7460	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9308	False	NA	-7	True	AATAAA	-15	NA	123680966	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620835_123621068_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.11	chr9	-	7588	20	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.4286328342028	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9311	False	NA	-7	True	AATAAA	-15	NA	123680963	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620853_123621072_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123674217_123674335_123680845
ES.36490.13	chr9	-	7622	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	-152	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9158	False	NA	-7	True	AATAAA	-15	NA	123681116	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620835_123621056_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.14	chr9	-	7559	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.2496913537908	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9337	False	NA	-7	True	AATAAA	-15	NA	123680937	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620849_123621087_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680712
ES.36490.15	chr9	-	7455	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9330	False	NA	-7	True	AATAAA	-15	NA	123680944	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620877_123621093_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.17	chr9	-	7455	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9328	False	NA	-7	True	AATAAA	-15	NA	123680946	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620864_123621082_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.18	chr9	-	7423	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	9338	False	NA	-7	True	AATAAA	-15	NA	123680936	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620858_123621098_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.19	chr9	-	3216	4	NNC	ENSMUSG00000091661.3	novel	2371	3	NA	NA	-6307	-17325	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.7371617907833	74	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	5885	False	NA	-7	True	AATAAA	-15	NA	123626661	123618574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620835_123621048_123621815_123623789_123623900_123626581
ES.36490.21	chr9	-	7842	19	NNC	ENSMUSG00000025241.17	novel	7949	19	NA	NA	14	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.2496913537908	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGAGTAGCATTGTCT	9342	False	NA	-8	True	AATAAA	-14	NA	123680932	123618575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620840_123621075_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680426
ES.36490.24	chr9	-	7235	18	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.7757898577702	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGGAGTAGCATTGTC	9338	False	NA	-9	True	AATAAA	-13	NA	123680936	123618576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620857_123621072_123621815_123623789_123623900_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.27	chr9	-	5844	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	4	-1607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.37638878602347	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATCTCATTTTTATTGC	9314	False	NA	NA	False	AATAGA	-22	NA	123680960	123620181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620862_123621098_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.3	chr9	-	5013	12	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	15748	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.2028626801994	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCATTGTCTTTTATTCC	NA	False	NA	0	True	AATAAA	-22	NA	123657923	123618567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620873_123621093_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240
ES.36490.30	chr9	-	5849	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	1	-1611	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGGATCTCATTTTTA	9324	False	NA	NA	False	AATAGA	-18	NA	123680950	123620185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620855_123621072_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.31	chr9	-	4639	18	FSM	ENSMUSG00000025241.17	ENSMUST00000167595.9	7692	18	14	3039	1	-3039	multi-exon	FALSE	canonical	3	23	junction_5	6.23584903191129	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAAGAAAATCAGCT	9324	False	NA	NA	False	ATTAAA	-11	NA	123680950	123621613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.32	chr9	-	4542	18	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	-1	-3077	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.9953411934264	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCATCCACAAAATTTTAA	9322	False	NA	NA	False	ATTAAA	-14	NA	123680952	123621651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123621815_123622046_123622136_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123680845
ES.36490.33	chr9	-	2693	1	NIC	ENSMUSG00000025241.17	novel	7949	19	NA	NA	21501	8099	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	123652170	123649477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_123649500_123652200
ES.36490.34	chr9	-	2624	4	NNC	ENSMUSG00000025241.17	novel	1179	4	NA	NA	-138	8099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.7279220613579	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCCTCCA	9172	False	NA	NA	False	NA	NA	NA	123681102	123649477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123651178_123667502_123668063_123669606_123669714_123680845
ES.36490.35	chr9	-	4888	5	NIC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	16368	8099	intron_retention	FALSE	canonical	3	31	junction_3	1.58113883008419	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	123657303	123649477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_123651595_123652242_123654739_123655610_123655730_123656149_123656243_123657240
ES.36490.36	chr9	-	2519	4	ISM	ENSMUSG00000025241.17	ENSMUST00000084715.14	7949	19	25032	30913	17977	8099	internal_fragment	FALSE	canonical	3	32	junction_3	1.4142135623731	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	123655694	123649477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr9_-_123651595_123652242_123652393_123654570_123654739_123655610
ES.36490.37	chr9	-	3952	11	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	-154	3278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.62496753241277	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGCCATTTCCTTATC	9156	False	NA	NA	False	AATAAA	-12	NA	123681118	123654298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680847
ES.36490.4	chr9	-	7526	20	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.6464824360587	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGCATTGTCTTTTATT	9329	False	NA	-2	True	AATAAA	-20	NA	123680945	123618569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620852_123621092_123621815_123622046_123622136_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.5	chr9	-	6987	16	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	9767	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.7879174158633	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTAGCATTGTCTTTTA	NA	False	NA	-4	True	AATAAA	-18	NA	123663904	123618571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620864_123621098_123621815_123622046_123622136_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857
ES.36490.6	chr9	-	7525	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	-69	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTAGCATTGTCTTT	9241	False	NA	-6	True	AATAAA	-16	NA	123681033	123618573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620862_123621098_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.7	chr9	-	7433	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	2	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTAGCATTGTCTTT	9330	False	NA	-6	True	AATAAA	-16	NA	123680944	123618573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620849_123621088_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36490.9	chr9	-	7463	19	NNC	ENSMUSG00000025241.17	novel	7692	18	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.37638878602347	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGTAGCATTGTCTTT	9323	False	NA	-6	True	AATAAA	-16	NA	123680951	123618573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_123620863_123621079_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ES.36491.1	chr9	-	8162	2	Intergenic	novelGene_29655	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTTGCATAGTACTCC	NA	False	NA	NA	False	NA	NA	NA	124093025	123953545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_123961428_124092745
ES.36491.10	chr9	-	2669	5	FSM	ENSMUSG00000074829.11	ENSMUST00000185949.2	634	5	1	-2036	1	-3	multi-exon	FALSE	non_canonical	0	0	junction_2	8.44097150806707	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACTATTATCATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	124075300	124054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124074305_124074381_124075189
ES.36491.11	chr9	-	2905	5	NNC	ENSMUSG00000074829.11	novel	634	5	NA	NA	10	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8.8423695919137	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAAAGAAAATGATATAC	NA	False	NA	NA	False	AATAAA	-8	NA	124075291	124054448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_124056732_124057727_124057789_124057987_124058115_124074305_124074381_124074932
ES.36491.12	chr9	-	732	1	Intergenic	novelGene_29656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGATCTCTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	124093009	124092277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_124092300_124093000
ES.36491.2	chr9	-	498	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-45	621	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCAATCAATGTGAT	NA	False	NA	NA	False	NA	NA	NA	124044814	124032366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
ES.36491.3	chr9	-	528	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	-57	-10	-57	10	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTACTGGAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	124044826	124032977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ES.36491.4	chr9	-	630	2	NIC	ENSMUSG00000110834.2	novel	461	4	NA	NA	-53	-627	intron_retention	FALSE	canonical	3	93	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAATGTCAGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	124044822	124033614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr9_-_124034127_124044704
ES.36491.5	chr9	-	901	1	Genic_Genomic	ENSMUSG00000110834.2	novel	NA	NA	NA	NA	-45	-10926	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTTGTGTTCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	124044814	124043913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_124043900_124044800
ES.36491.6	chr9	-	3502	4	FSM	ENSMUSG00000074829.11	ENSMUST00000189915.7	683	4	-795	-2024	2	-3	multi-exon	FALSE	non_canonical	0	0	junction_2	9.46337971105226	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACTATTATCATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	124075324	124054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124074305
ES.36491.7	chr9	-	2618	4	FSM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	2	3	2	-3	multi-exon	FALSE	non_canonical	0	0	junction_2	8.73053390247253	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACTATTATCATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	124075324	124054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124075189
ES.36491.8	chr9	-	2645	5	FSM	ENSMUSG00000074829.11	ENSMUST00000071300.13	795	5	-16	-1834	13	-3	multi-exon	FALSE	non_canonical	0	0	junction_2	8.95823643358446	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACTATTATCATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	124075288	124054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124067285_124067349_124075189
ES.36491.9	chr9	-	2486	5	NNC	ENSMUSG00000074829.11	novel	634	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.29903810567666	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATACTATTATCATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	124075325	124054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_124056555_124057758_124057789_124057987_124058115_124074305_124074381_124075189
ES.36492.1	chr9	-	4143	2	NNC	ENSMUSG00000111194.2	novel	802	4	NA	NA	3715	-21	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTTTTAGAATCTC	NA	False	NA	NA	False	AATAAA	-16	NA	124105682	124101434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_-_124101768_124101872
ES.36492.2	chr9	-	213	1	Antisense	novelGene_ENSMUSG00000111733.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGACACGGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	124102200	124101987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_124102000_124102200
ES.36493.1	chr9	+	2299	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-532	1096	at_least_one_novel_splicesite	TRUE	canonical	3	45	junction_1	43.8003678320425	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195294	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.10	chr9	+	2703	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-101	-644	intron_retention	FALSE	canonical	3	45	junction_1	44.413347707029	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGCCCATTGTCAACT	NA	False	NA	NA	False	AATAGA	-15	NA	124195725	124202995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794
ES.36493.11	chr9	+	2299	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-31	-646	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	43.8003678320425	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATGGCCCATTGTCAA	NA	False	NA	NA	False	AATAGA	-13	NA	124195795	124202993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.12	chr9	+	2078	11	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	23	1096	intron_retention	FALSE	non_canonical	0	0	junction_6	60.1315225152332	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195849	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199836_124200410_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.13	chr9	+	4221	7	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	28	1096	intron_retention	FALSE	canonical	3	121	junction_1	25.6753232155356	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195854	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201396_124201794
ES.36493.14	chr9	+	2690	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	53	1096	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	50.0480760604778	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195879	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196748_124197152_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.15	chr9	+	4015	10	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	56	1097	intron_retention	FALSE	canonical	1	1	junction_8	68.3484174859924	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124195882	124202493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124196340_124197351_124197648_124197753_124197928_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201171_124201276_124201396_124201794
ES.36493.16	chr9	+	3784	9	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	70	1097	intron_retention	FALSE	canonical	3	114	junction_1	29.1694939105909	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124195896	124202493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794
ES.36493.17	chr9	+	2909	11	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	113	1097	intron_retention	FALSE	canonical	2	5	junction_1	65.7209251304332	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGGTGCACAGTCAGG	NA	False	NA	20	True	AATAAA	-21	NA	124195939	124202493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124196340_124196748_124197152_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.18	chr9	+	2138	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	133	1096	intron_retention	FALSE	canonical	0	0	junction_2	63.7656298922512	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195959	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124196340_124196472_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.19	chr9	+	1921	13	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-47	1096	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	49.060266226573	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124196350	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196748_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.2	chr9	+	2335	12	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-497	1096	intron_retention	FALSE	non_canonical	0	0	junction_1	53.7992902960963	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195329	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124195508_124196892_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.20	chr9	+	1820	13	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-21	1096	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	59.8641981673706	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124196376	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196748_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201833_124202239
ES.36493.21	chr9	+	1885	13	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-18	1096	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	64.8555553176099	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124196379	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196748_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201026_124201276_124201396_124201794_124201932_124202239
ES.36493.22	chr9	+	1560	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	719	1096	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_4	34.2887592115034	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124197116	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.23	chr9	+	1999	10	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-658	1096	intron_retention	FALSE	canonical	3	104	junction_1	31.3372731959567	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124197270	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201396_124201794_124201908_124202239
ES.36493.24	chr9	+	1945	11	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-398	-646	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	32.5799017800852	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATGGCCCATTGTCAA	NA	False	NA	NA	False	AATAGA	-13	NA	124197530	124202993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.25	chr9	+	1298	10	NNC	ENSMUSG00000093803.6	novel	385	3	NA	NA	-355	1096	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	57.5924377751879	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124197573	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197753_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.26	chr9	+	1618	10	NNC	ENSMUSG00000093803.6	novel	422	4	NA	NA	-240	1096	intron_retention	FALSE	canonical	3	98	junction_3	33.5010595004743	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124197688	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794
ES.36493.27	chr9	+	1190	9	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	675	1096	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	29.9322150867589	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124198632	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.28	chr9	+	1142	8	NNC	ENSMUSG00000093803.6	novel	385	3	NA	NA	-1027	1096	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.6118327539372	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124199389	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124199575_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.3	chr9	+	2623	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-483	1096	intron_retention	FALSE	canonical	3	45	junction_1	43.6816053348329	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195343	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.4	chr9	+	4045	8	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-427	1096	intron_retention	FALSE	canonical	3	45	junction_1	48.0887784440913	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195399	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794
ES.36493.5	chr9	+	4450	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-416	0	intron_retention	FALSE	canonical	3	45	junction_1	43.8003678320425	180	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTCTGTCCTACGA	NA	False	NA	NA	False	NA	NA	NA	124195410	124204759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.6	chr9	+	2668	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-410	1096	intron_retention	FALSE	canonical	0	0	junction_5	68.2407909945038	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195416	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198336_124198455_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
ES.36493.7	chr9	+	2058	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-404	1096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.8989282891116	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195422	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201832_124201908_124202239
ES.36493.8	chr9	+	2204	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-400	1096	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	56.3897646346884	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195426	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202202
ES.36493.9	chr9	+	2593	11	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-121	1096	intron_retention	FALSE	canonical	3	45	junction_1	44.6519876377301	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGGTGCACAGTCAG	NA	False	NA	19	True	AATAAA	-20	NA	124195705	124202492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794
ES.36494.1	chr9	-	1539	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTGTGAGTTTATGA	NA	False	NA	NA	False	NA	NA	NA	124198163	124194873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_124196190_124197940
ES.36494.2	chr9	-	913	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124198165	124195501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_124196190_124197940
ES.36494.3	chr9	-	681	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGAGTGATGGCGTCAC	NA	False	NA	0	True	AATAAA	-16	NA	124198125	124195693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr9_-_124196190_124197940
ES.36495.1	chr9	-	850	2	Intergenic	novelGene_29657	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTTCTATCGTACAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	124239730	124203003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr9_-_124203757_124239633
ES.36495.2	chr9	-	3817	2	Genic_Genomic	ENSMUSG00000111523.2	novel	774	1	NA	NA	-426	3621	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTTCTATCGTACAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	124207824	124203003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_124203757_124204760
ES.36495.3	chr9	-	3085	2	Genic_Genomic	ENSMUSG00000111523.2	novel	774	1	NA	NA	-32332	376	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGACCCTCAAAG	NA	False	NA	NA	False	AATAAA	-9	NA	124239730	124206248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_124209237_124239633
ES.36495.4	chr9	-	3997	4	Genic_Genomic	ENSMUSG00000111523.2	novel	774	1	NA	NA	-32349	2	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACATTCTGTATTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	124239747	124206622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr9_-_124209237_124212958_124213123_124214249_124215355_124239633
ES.36496.1	chrM	+	142	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	4	809	4	-809	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACACCCCCACGGGACT	1	True	NA	-33	True	ATTAAA	-22	NA	73	215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_100_200
ES.36496.10	chrM	+	2635	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	0	-1053	0	1053	mono-exon	FALSE	NA	NA	NA	NA	NA	2582	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTGATAGAGTAAATTA	-3	True	NA	4	True	GATAAA	-6	NA	1093	3728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1100_3700
ES.36496.12	chrM	+	1453	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	22	107	22	-107	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGACAAGAGAAATAGAG	0	True	NA	-73	True	NA	NA	NA	1115	2568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1100_2600
ES.36496.13	chrM	+	280	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	80	1222	80	-1222	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGAATTTAAGTTCA	14	False	NA	-6	True	NA	NA	NA	1173	1453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1200_1500
ES.36496.14	chrM	+	2399	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	102	-919	102	919	mono-exon	FALSE	NA	NA	NA	NA	NA	2577	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATCAACTTATACATCTT	5	False	NA	85	True	NA	NA	NA	1195	3594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1200_3600
ES.36496.15	chrM	+	1146	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	122	314	122	-314	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTACCCTAGGGATAACA	25	False	NA	52	True	AGTAAA	-45	NA	1215	2361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1200_2400
ES.36496.17	chrM	+	177	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	456	949	456	-949	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGTTAGTATGAGTAA	13	False	NA	20	True	NA	NA	NA	1549	1726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1500_1700
ES.36496.18	chrM	+	97	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	1014	471	1014	-471	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACCTAATGGCCCAAAAA	35	False	NA	10	True	NA	NA	NA	2107	2204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_2100_2200
ES.36496.19	chrM	+	220	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	1	736	1	-736	mono-exon	FALSE	NA	NA	NA	NA	NA	2290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACCCTATCACTCACAC	-1	True	NA	69	True	NA	NA	NA	2751	2971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_2800_3000
ES.36496.2	chrM	+	674	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	4	277	4	-277	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCAAGGTGTAGCCAAT	1	True	NA	-47	True	ATTAAA	-30	NA	73	747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_100_700
ES.36496.20	chrM	+	499	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	1	457	1	-457	mono-exon	FALSE	NA	NA	NA	NA	NA	2352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAGAACACATATGAT	-1	True	NA	32	True	AATAAA	-31	NA	2751	3250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_2800_3200
ES.36496.21	chrM	+	2205	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	-1162	-5	-1162	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2757	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATATACTAGTCCGCGA	-1	True	NA	-22	True	NA	NA	NA	2751	4956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_2800_5000
ES.36496.23	chrM	+	1174	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	-137	1	-137	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAGGATATACTAGT	337	False	NA	-28	True	NA	NA	NA	3776	4950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_3800_5000
ES.36496.24	chrM	+	619	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	-67	486	-67	-486	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCACATAGGATGAATATT	407	False	NA	27	True	NA	NA	NA	3846	4465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_3800_4500
ES.36496.25	chrM	+	3068	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-1414	-109	-1414	109	mono-exon	FALSE	NA	NA	NA	NA	NA	3188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATAGATCAATAATCT	-3	True	NA	NA	False	AGTAAA	-27	NA	3913	6981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_3900_7000
ES.36496.26	chrM	+	104	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	320	614	320	-614	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCAAATTTACCCGCTA	0	True	NA	126	True	NA	NA	NA	4233	4337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_4200_4300
ES.36496.27	chrM	+	520	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	379	139	379	-139	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACTAACAATATTTCCAA	1	True	NA	52	True	ACTAAA	-34	NA	4292	4812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_4300_4800
ES.36496.28	chrM	+	160	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	511	367	511	-367	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAACCATCAACTCAATCT	9	True	NA	23	True	ACTAAA	-7	NA	4424	4584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_4400_4600
ES.36496.29	chrM	+	1395	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-571	721	-571	-721	mono-exon	FALSE	NA	NA	NA	NA	NA	2029	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATAATGTCTATTGGCT	-1	True	NA	13	True	AAAAAG	-29	NA	4756	6151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_4800_6200
ES.36496.3	chrM	+	948	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	5	2	5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAGTGTAGCTTAATAT	2	True	NA	-49	True	NA	NA	NA	74	1022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_100_1000
ES.36496.30	chrM	+	569	1	FSM	ENSMUSG00000064346.1	ENSMUST00000082397.1	67	1	-193	-309	-193	309	mono-exon	FALSE	NA	NA	NA	NA	NA	927	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTTCATTAATCGTTGA	-1	True	NA	NA	False	NA	NA	NA	4756	5325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_4800_5300
ES.36496.31	chrM	+	184	1	Antisense	novelGene_ENSMUSG00000064349.1_AS_novelGene_ENSMUSG00000064347.1_AS_novelGene_ENSMUSG00000064348.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATTTCTCTACACCTT	-1	True	NA	NA	False	NA	NA	NA	5016	5200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_+_5000_5200
ES.36496.32	chrM	+	2608	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-230	-833	-230	833	mono-exon	FALSE	NA	NA	NA	NA	NA	3193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTAAGAGCGTTAACCT	80	False	NA	NA	False	ACTAAA	-44	NA	5097	7705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5100_7700
ES.36496.33	chrM	+	309	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-3	1239	-3	-1239	mono-exon	FALSE	NA	NA	NA	NA	NA	1284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCCTACCACCATCATT	-2	True	NA	13	True	AATAAA	-14	NA	5324	5633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5300_5600
ES.36496.34	chrM	+	1091	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	-3	457	-3	-457	mono-exon	FALSE	NA	NA	NA	NA	NA	2723	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCGTGCTTCACGATA	-2	True	NA	103	True	NA	NA	NA	5324	6415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5300_6400
ES.36496.35	chrM	+	442	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	0	1103	0	-1103	mono-exon	FALSE	NA	NA	NA	NA	NA	1406	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTTCATTTAGCTGGA	1	True	NA	80	True	NA	NA	NA	5327	5769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5300_5800
ES.36496.36	chrM	+	697	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	3	845	3	-845	mono-exon	FALSE	NA	NA	NA	NA	NA	1596	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGATTCTTTGGGCAC	4	True	NA	141	True	NA	NA	NA	5330	6027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5300_6000
ES.36496.37	chrM	+	1454	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	78	13	78	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	2894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAATAAGAAAGGA	-1	True	NA	NA	False	NA	NA	NA	5405	6859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5400_6900
ES.36496.38	chrM	+	1332	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	80	133	80	-133	mono-exon	FALSE	NA	NA	NA	NA	NA	2834	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGAGGCCTTTGCTT	1	True	NA	NA	False	NA	NA	NA	5407	6739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5400_6700
ES.36496.39	chrM	+	406	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	146	993	146	-993	mono-exon	FALSE	NA	NA	NA	NA	NA	1486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATCCGTACTTATTAC	67	False	NA	-7	True	NA	NA	NA	5473	5879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5500_5900
ES.36496.4	chrM	+	325	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	35	595	35	-595	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAATAACGAAAGTAA	3	False	NA	-21	True	ATTAAA	-37	NA	104	429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_100_400
ES.36496.40	chrM	+	1075	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	229	241	229	-241	mono-exon	FALSE	NA	NA	NA	NA	NA	2800	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCACGACGCTACTCAG	150	False	NA	NA	False	AGTAAA	-40	NA	5556	6631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_5600_6600
ES.36496.41	chrM	+	687	2	Genic_Genomic	ENSMUSG00000064351.1	novel	1545	1	NA	NA	863	66	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGATATTAGTAAAATC	2	True	NA	NA	False	NA	NA	NA	6190	6938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrM_+_6458_6518
ES.36496.42	chrM	+	2434	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	-1594	-56	-1594	56	mono-exon	FALSE	NA	NA	NA	NA	NA	2398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAGAGTAATTAACCT	-1	True	NA	NA	False	AATAAA	-3	NA	7012	9446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7000_9400
ES.36496.43	chrM	+	361	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	0	323	0	-323	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATCCCAACAAACGAC	-1	True	NA	NA	False	AATATA	-31	NA	7012	7373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7000_7400
ES.36496.44	chrM	+	229	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	325	130	325	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAACCGACCAGGGTTAT	299	False	NA	NA	False	ACTAAA	-16	NA	7337	7566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7300_7600
ES.36496.45	chrM	+	1216	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	-409	-126	-409	126	mono-exon	FALSE	NA	NA	NA	NA	NA	2252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTTGGCCTACTCACC	479	False	NA	NA	False	NA	NA	NA	7517	8733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7500_8700
ES.36496.46	chrM	+	249	1	FSM	ENSMUSG00000064356.1	ENSMUST00000082407.1	204	1	0	-45	0	45	mono-exon	FALSE	NA	NA	NA	NA	NA	1423	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCCATCCTCAAAACGC	-11	True	NA	NA	False	NA	NA	NA	7765	8014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_8000
ES.36496.47	chrM	+	1150	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	-161	-308	-161	308	mono-exon	FALSE	NA	NA	NA	NA	NA	2016	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCGTACCAACACA	-11	True	NA	NA	False	NA	NA	NA	7765	8915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_8900
ES.36496.48	chrM	+	115	1	FSM	ENSMUSG00000064356.1	ENSMUST00000082407.1	204	1	0	89	0	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	1403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATCACTAACAACCATA	-11	True	NA	NA	False	ACTAAA	-36	NA	7765	7880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_7900
ES.36496.49	chrM	+	486	1	FSM	ENSMUSG00000064356.1	ENSMUST00000082407.1	204	1	0	-282	0	282	mono-exon	FALSE	NA	NA	NA	NA	NA	1451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGAGCCGTAATTACA	-11	True	NA	NA	False	CATAAA	-24	NA	7765	8251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_8300
ES.36496.5	chrM	+	143	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	411	401	411	-401	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTATAATCGATAAACC	58	False	NA	102	True	NA	NA	NA	480	623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_500_600
ES.36496.50	chrM	+	1985	2	Genic_Genomic	ENSMUSG00000064363.1_ENSMUSG00000064364.1_ENSMUSG00000064356.1	novel	1378	1	NA	NA	0	-9	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTCACCAAGAAAGATTG	-11	True	NA	-4	True	AATAAA	-6	NA	7765	11603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrM_+_8060_9912
ES.36496.51	chrM	+	635	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	-161	207	-161	-207	mono-exon	FALSE	NA	NA	NA	NA	NA	1487	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCTTACAGCTAACATTAC	-11	True	NA	NA	False	NA	NA	NA	7765	8400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_8400
ES.36496.52	chrM	+	3781	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-2401	-2	-2401	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2964	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATAGTTTACAAAAAAC	-11	True	NA	15	True	NA	NA	NA	7765	11546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_11500
ES.36496.53	chrM	+	672	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	-79	88	-79	-88	mono-exon	FALSE	NA	NA	NA	NA	NA	1544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACAATTCTAGAATTTG	71	False	NA	NA	False	NA	NA	NA	7847	8519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_7800_8500
ES.36496.54	chrM	+	659	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	0	125	0	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	1127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGACAACTAAAATTTCACT	-2	True	NA	NA	False	NA	NA	NA	8606	9265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_8600_9300
ES.36496.56	chrM	+	109	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	331	344	331	-344	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCATAGCCTTATAGAAG	319	False	NA	NA	False	NA	NA	NA	8937	9046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_8900_9000
ES.36496.57	chrM	+	334	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	12	2	12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAATTAGTTTAAAA	10	False	NA	NA	False	AAAAAG	-19	NA	9470	9804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_9500_9800
ES.36496.58	chrM	+	236	1	FSM	ENSMUSG00000065947.1	ENSMUST00000084013.1	297	1	0	61	0	-61	mono-exon	FALSE	NA	NA	NA	NA	NA	667	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTCAAACACGTACG	-1	True	NA	NA	False	NA	NA	NA	9876	10112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_9900_10100
ES.36496.59	chrM	+	1409	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	-290	259	-290	-259	mono-exon	FALSE	NA	NA	NA	NA	NA	812	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTAATAGGAGAATTATT	-1	True	NA	-86	True	NA	NA	NA	9876	11285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_9900_11300
ES.36496.6	chrM	+	1848	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	-259	-7	-259	7	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAGCCAGGAAATTGC	141	False	NA	41	True	AATAAA	-42	NA	834	2682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_800_2700
ES.36496.60	chrM	+	876	1	FSM	ENSMUSG00000065947.1	ENSMUST00000084013.1	297	1	0	-579	0	579	mono-exon	FALSE	NA	NA	NA	NA	NA	733	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGGCATGCATAATAGCA	-1	True	NA	NA	False	NA	NA	NA	9876	10752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_9900_10800
ES.36496.61	chrM	+	577	1	FSM	ENSMUSG00000065947.1	ENSMUST00000084013.1	297	1	171	-451	171	451	mono-exon	FALSE	NA	NA	NA	NA	NA	723	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATCGGTTCTATTCCAC	66	False	NA	NA	False	NA	NA	NA	10047	10624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_10000_10600
ES.36496.62	chrM	+	570	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	128	680	128	-680	mono-exon	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTCTAAAATTAGGTA	197	False	NA	NA	False	NA	NA	NA	10294	10864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_10300_10900
ES.36496.63	chrM	+	812	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	436	130	436	-130	mono-exon	FALSE	NA	NA	NA	NA	NA	825	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTAACCAACCATAT	505	False	NA	43	True	AATATA	-23	NA	10602	11414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_10600_11400
ES.36496.64	chrM	+	88	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	715	575	715	-575	mono-exon	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTATAACTAGCTCAA	277	False	NA	-75	True	AATATA	-35	NA	10881	10969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_10900_11000
ES.36496.7	chrM	+	2817	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	-69	-1166	-69	1166	mono-exon	FALSE	NA	NA	NA	NA	NA	2623	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTAAGGTCAGCTAATT	331	False	NA	11	True	NA	NA	NA	1024	3841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1000_3800
ES.36496.8	chrM	+	893	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	0	689	0	-689	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTAAAGTTTAACGGC	-3	True	NA	39	True	AAAACA	-41	NA	1093	1986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1100_2000
ES.36496.9	chrM	+	487	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	0	1095	0	-1095	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGCTTTTAACCA	-3	True	NA	9	True	NA	NA	NA	1093	1580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_1100_1600
ES.36497.1	chrM	+	1474	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	-71	421	-71	-421	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATATAATATTCCACCAA	206	False	NA	59	True	NA	NA	NA	11670	13144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_13100
ES.36497.10	chrM	+	1758	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	66	0	-66	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTATATCATTCCTAAT	-4	True	NA	77	True	ATTAAA	-4	NA	11741	13499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_13500
ES.36497.12	chrM	+	3606	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	-1782	0	1782	mono-exon	FALSE	NA	NA	NA	NA	NA	3546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGACATCAAGAAGAAGG	-4	True	NA	-64	True	TATAAA	-44	NA	11741	15347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_15300
ES.36497.14	chrM	+	590	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	428	806	428	-806	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGCTCTGGCTCAATC	98	False	NA	9	True	NA	NA	NA	12169	12759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_12200_12800
ES.36497.15	chrM	+	203	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	442	1179	442	-1179	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAATCGCAGCTACAGG	112	False	NA	-24	True	NA	NA	NA	12183	12386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_12200_12400
ES.36497.16	chrM	+	115	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	1164	545	1164	-545	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTTCGTAACAATAACA	210	False	NA	62	True	NA	NA	NA	12905	13020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_12900_13000
ES.36497.17	chrM	+	603	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	541	0	-541	mono-exon	FALSE	NA	NA	NA	NA	NA	3089	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGGATCAAACAACCC	-2	True	NA	-23	True	NA	NA	NA	14144	14747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_14700
ES.36497.18	chrM	+	458	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	686	0	-686	mono-exon	FALSE	NA	NA	NA	NA	NA	3057	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATATATTGGAACAACCC	-2	True	NA	-14	True	NA	NA	NA	14144	14602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_14600
ES.36497.19	chrM	+	154	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	990	0	-990	mono-exon	FALSE	NA	NA	NA	NA	NA	2882	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATACACTACACATCAGAT	-2	True	NA	31	True	NA	NA	NA	14144	14298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_14300
ES.36497.2	chrM	+	262	1	FSM	ENSMUSG00000064366.1	ENSMUST00000082417.1	71	1	0	-191	0	191	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGCACTGAGTCACCA	206	False	NA	-15	True	AATATA	-15	NA	11670	11932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_11900
ES.36497.20	chrM	+	1074	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	70	0	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	3212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATCATCTTAATTCT	-2	True	NA	-58	True	NA	NA	NA	14144	15218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_15200
ES.36497.21	chrM	+	962	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	182	0	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	3177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTTTGTACTGAATCC	-2	True	NA	166	True	NA	NA	NA	14144	15106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_15100
ES.36497.22	chrM	+	664	2	Genic_Genomic	ENSMUSG00000064370.1	novel	1144	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTGATAGTATAAACATT	-2	True	NA	12	True	ACTAAA	-12	NA	14144	15288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrM_+_14700_15179
ES.36497.23	chrM	+	271	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	873	0	-873	mono-exon	FALSE	NA	NA	NA	NA	NA	3001	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCTTATTCCTTCAT	-2	True	NA	148	True	NA	NA	NA	14144	14415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_14100_14400
ES.36497.25	chrM	+	383	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCGGGCCCATTAAACTT	-2	True	NA	0	True	NA	NA	NA	15355	15738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_+_15400_15700
ES.36497.26	chrM	+	942	1	Antisense	novelGene_ENSMUSG00000064372.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AA	-2	True	NA	NA	False	AATAAA	-8	NA	15355	16297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_+_15400_16300
ES.36497.27	chrM	+	372	1	Intergenic	novelGene_29659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTGAAGAATCATTAGTCC	-1	True	NA	-48	True	NA	NA	NA	15619	15991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_+_15600_16000
ES.36497.3	chrM	+	2482	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	-71	-587	-71	587	mono-exon	FALSE	NA	NA	NA	NA	NA	3120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACGAAAAACACACCCAT	206	False	NA	95	True	NA	NA	NA	11670	14152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_14200
ES.36497.4	chrM	+	2279	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	-1	-454	-1	454	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGACAACCAACCAAAAATA	-5	True	NA	-38	True	ATTAAA	-42	NA	11740	14019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_14000
ES.36497.5	chrM	+	1567	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	257	0	-257	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTACTGGGGTTTTTC	-4	True	NA	-42	True	AATAAA	-27	NA	11741	13308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_13300
ES.36497.6	chrM	+	4362	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	-2538	0	2538	mono-exon	FALSE	NA	NA	NA	NA	NA	3570	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTCTTAATGCCAAACCC	-4	True	NA	64	True	CATAAA	-44	NA	11741	16103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_16100
ES.36497.7	chrM	+	1130	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	694	0	-694	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGCCCTCACAGGAATAC	-4	True	NA	79	True	NA	NA	NA	11741	12871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_12900
ES.36497.8	chrM	+	3723	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	-1899	0	1899	mono-exon	FALSE	NA	NA	NA	NA	NA	3561	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACATTAAACTATTTTCC	-4	True	NA	53	True	CATAAA	-33	NA	11741	15464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_15500
ES.36497.9	chrM	+	2042	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	-218	0	218	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCCCAATACTAAAAAACC	-4	True	NA	16	True	ATTAAA	-16	NA	11741	13783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_+_11700_13800
ES.36498.1	chrM	-	338	1	Antisense	novelGene_ENSMUSG00000064337.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTCTCTGGCAAATAGT	5499	False	NA	NA	False	TATAAA	-37	NA	903	565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_-_600_900
ES.36499.1	chrM	-	1369	1	Antisense	novelGene_ENSMUSG00000064339.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAATTTCTTTCTCCAAT	9957	False	NA	NA	False	NA	NA	NA	2557	1188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_-_1200_2600
ES.36499.2	chrM	-	638	1	Antisense	novelGene_ENSMUSG00000064339.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCCGAGTTCCTTTT	9955	False	NA	NA	False	NA	NA	NA	2559	1921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_-_1900_2600
ES.365.1	chr1	-	4823	5	Antisense	novelGene_ENSMUSG00000026074.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAAACTTCTGACTC	NA	False	NA	NA	False	NA	NA	NA	40042815	40026870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_40028201_40029246_40029458_40036178_40036341_40039045_40039132_40039781
ES.365.2	chr1	-	5439	4	Antisense	novelGene_ENSMUSG00000026074.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40042815	40026904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_40028201_40029246_40029458_40036178_40036341_40039045
ES.365.3	chr1	-	8144	3	Antisense	novelGene_ENSMUSG00000026074.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40042815	40026904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_40028201_40029246_40029458_40036178
ES.365.4	chr1	-	4166	1	Antisense	novelGene_ENSMUSG00000026074.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAAACCAACCAAACAGG	NA	False	NA	NA	False	NA	NA	NA	40042815	40038649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_40038600_40042800
ES.3650.1	chr10	+	481	3	NNC	ENSMUSG00000112188.2	novel	632	3	NA	NA	-48900	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGTAAGTAATCTAG	1969	False	NA	NA	False	NA	NA	NA	95517144	95575214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95517233_95570676_95570791_95574935
ES.3650.2	chr10	+	659	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	11	0	11	0	multi-exon	FALSE	canonical	3	30	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAAGTAATCTAGG	3231	False	NA	NA	False	NA	NA	NA	95567099	95575215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95567365_95570676_95570791_95574935
ES.3650.3	chr10	+	624	3	NNC	ENSMUSG00000112188.2	novel	670	3	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAAGTAATCTAGG	3251	False	NA	NA	False	NA	NA	NA	95567119	95575215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95567365_95570676_95570776_95574935
ES.36500.1	chrM	-	93	1	FSM	ENSMUSG00000064349.1	ENSMUST00000082400.1	66	1	2	-29	2	29	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGATTGAAGCCAGTAA	9832	False	NA	-6	True	NA	NA	NA	5255	5162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_5200_5300
ES.36501.1	chrM	-	5450	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-4931	0	4931	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTGGGTCATTATGTA	-3	True	NA	NA	False	NA	NA	NA	14070	8620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_8600_14100
ES.36501.2	chrM	-	4825	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-4306	0	4306	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGATCCAATAATTACAT	-3	True	NA	NA	False	NA	NA	NA	14070	9245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_9200_14100
ES.36501.3	chrM	-	2635	1	Antisense	novelGene_ENSMUSG00000064365.1_AS_novelGene_ENSMUSG00000064367.1_AS_novelGene_ENSMUSG00000065947.1_AS_novelGene_ENSMUSG00000064361.1_AS_novelGene_ENSMUSG00000064363.1_AS_novelGene_ENSMUSG00000064364.1_AS_novelGene_ENSMUSG00000064366.1_AS_novelGene_ENSMUSG00000064360.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATATTAATGAAGAT	4	True	NA	NA	False	NA	NA	NA	12131	9496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_-_9500_12100
ES.36501.4	chrM	-	4232	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-3713	0	3713	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATTAATTTTTTTTAA	-3	True	NA	NA	False	NA	NA	NA	14070	9838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_9800_14100
ES.36501.5	chrM	-	3395	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	268	-3144	268	3144	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAGCTATTAATATTAGT	2386	False	13823	NA	False	NA	NA	NA	13802	10407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_10400_13800
ES.36501.6	chrM	-	2421	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-1902	0	1902	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAGCATGAATTAGCAG	-3	True	NA	NA	False	TATAAA	-25	NA	14070	11649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_11600_14100
ES.36501.7	chrM	-	1898	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	267	-1646	267	1646	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATTAATAGGGGTAA	2385	False	13823	NA	False	NA	NA	NA	13803	11905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_11900_13800
ES.36501.8	chrM	-	1142	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-623	0	623	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAGGTCTTTTGAGTA	-3	True	NA	NA	False	NA	NA	NA	14070	12928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_12900_14100
ES.36501.9	chrM	-	554	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	-35	0	35	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAATGATATAAAGTACAA	-3	True	NA	NA	False	NA	NA	NA	14070	13516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_13500_14100
ES.36502.1	chrM	-	1212	1	Antisense	novelGene_ENSMUSG00000064370.1_AS_novelGene_ENSMUSG00000064371.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTCTGTAGTTGAATTA	835	False	NA	-2	True	TTTAAA	-34	NA	15353	14141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrM_-_14100_15400
ES.36502.2	chrM	-	1828	1	FSM	ENSMUSG00000064372.1	ENSMUST00000082423.1	67	1	-765	-996	-765	996	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACAAATGTGTGTTAC	1	True	NA	NA	False	NA	NA	NA	16187	14359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_14400_16200
ES.36502.3	chrM	-	829	1	FSM	ENSMUSG00000064372.1	ENSMUST00000082423.1	67	1	-765	3	-765	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTCTTGAGAAGAGAAG	1	True	NA	-10	True	NA	NA	NA	16187	15358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrM_-_15400_16200
ES.36502.4	chrM	-	695	1	Intergenic	novelGene_29658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGGGGAAAATAGTTT	1	True	NA	-75	True	NA	NA	NA	16187	15492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_-_15500_16200
ES.36502.5	chrM	-	558	1	Intergenic	novelGene_29660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTATGTCAGATAACAC	1	True	NA	NA	False	NA	NA	NA	16187	15629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_-_15600_16200
ES.36502.6	chrM	-	444	1	Intergenic	novelGene_29661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCGAGAAGAGGGGCATT	1	True	NA	95	True	GATAAA	-36	NA	16187	15743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_-_15700_16200
ES.36502.7	chrM	-	318	1	Intergenic	novelGene_29662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGATACCATCGAGATGT	1	True	NA	-31	True	NA	NA	NA	16187	15869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_-_15900_16200
ES.36502.8	chrM	-	197	1	Intergenic	novelGene_29663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGCGTCTAGACTGTGT	0	True	NA	-49	True	NA	NA	NA	16188	15991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrM_-_16000_16200
ES.36503.1	chrUn_GL456367v1	+	177	1	Intergenic	novelGene_29664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	12382	12559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_GL456367v1_+_12400_12600
ES.36504.1	chrUn_GL456368v1	+	2048	1	Intergenic	novelGene_29665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAATGAGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	6242	8290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_GL456368v1_+_6200_8300
ES.36505.1	chrUn_GL456368v1	+	177	1	Intergenic	novelGene_29666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATATAGCTTGTC	NA	False	NA	NA	False	NA	NA	NA	18097	18274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_GL456368v1_+_18100_18300
ES.36506.1	chrUn_GL456378v1	+	178	1	Intergenic	novelGene_29667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	17173	17351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_GL456378v1_+_17200_17400
ES.36507.1	chrUn_GL456382v1	-	550	1	Intergenic	novelGene_29668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	AATAAA	-19	NA	14752	14202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_GL456382v1_-_14200_14800
ES.36508.1	chrUn_JH584304v1	+	3796	2	Intergenic	novelGene_29669	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAACCAAAACCACTCCC	NA	False	NA	NA	False	NA	NA	NA	3665	7679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_4305_4522
ES.36508.10	chrUn_JH584304v1	+	3834	2	Intergenic	novelGene_29684	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31626	35535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_33223_33297
ES.36508.11	chrUn_JH584304v1	+	3614	2	Intergenic	novelGene_29685	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTCCATGGCCAAGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	31708	35372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_33227_33276
ES.36508.13	chrUn_JH584304v1	+	3595	2	Intergenic	novelGene_29686	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTCTAATGTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	32903	36548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_33227_33276
ES.36508.14	chrUn_JH584304v1	+	3725	18	Intergenic	novelGene_29687	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_12	21.9114291328429	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	34125	52729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_35417_38114_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49055_49312_49863_49969_50092_50277_51408_51545_51650_51730_52288
ES.36508.15	chrUn_JH584304v1	+	4101	17	Intergenic	novelGene_29688	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_9	22.1006221631881	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	34146	52729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_35417_38114_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47516_47678_48581_48657_48768_48946_49051_49969_50092_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.16	chrUn_JH584304v1	+	2403	19	Intergenic	novelGene_29689	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	23.627837212873	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTCCTACTTTTC	NA	False	NA	6	True	ATTAAA	-12	NA	34392	52726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_34533_38114_38246_39081_39164_39432_39612_40110_40187_40595_40692_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_49312_49863_49969_51408_51545_51650_51730_52288_52401_52484
ES.36508.17	chrUn_JH584304v1	+	3398	16	Intergenic	novelGene_29690	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	21.1559290349853	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAAGTCTCCTACTTTT	NA	False	NA	5	True	ATTAAA	-11	NA	35926	52725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_37005_37939_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_49312_51408_51545_51650_51730_52288
ES.36508.18	chrUn_JH584304v1	+	5283	14	Intergenic	novelGene_29691	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_4	10.2806764219242	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	37077	52729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_51545_51650_51730_52288
ES.36508.19	chrUn_JH584304v1	+	3343	18	Intergenic	novelGene_29692	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_13	19.1896382074512	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	37139	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_49312_49863_49984_50092_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.2	chrUn_JH584304v1	+	4014	26	Intergenic	novelGene_29670	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	8	junction_13	17.6680502602862	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCCTACTTTTCATAC	NA	False	NA	10	True	ATTAAA	-16	NA	5070	52730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_5089_14083_14202_19242_19346_20219_20377_24796_24959_26983_27055_28052_28146_29421_29520_31432_31500_38114_38246_39081_39164_39432_39612_40110_40187_40595_40692_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.20	chrUn_JH584304v1	+	2646	15	Intergenic	novelGene_29694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_7	19.7898396936923	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	38137	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_48581_48657_48768_48946_49051_49969_50092_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.21	chrUn_JH584304v1	+	2635	16	Intergenic	novelGene_29695	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	19.6972643334607	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	39585	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_39612_40110_40187_40595_40692_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_49969_50092_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.22	chrUn_JH584304v1	+	2605	13	Intergenic	novelGene_29696	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_12	13.1866936299017	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	40142	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_40187_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.23	chrUn_JH584304v1	+	3503	11	Intergenic	novelGene_29697	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	49	junction_2	8.4504437753292	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	40191	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_50277_51408_51545_51650_51730_52288
ES.36508.24	chrUn_JH584304v1	+	2851	12	Intergenic	novelGene_29698	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_3	20.1359019031814	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	False	NA	8	True	ATTAAA	-14	NA	40779	52728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_41127_41974_42078_44213_44311_47496_47678_47923_47999_48581_48657_48768_48946_49051_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.25	chrUn_JH584304v1	+	3969	9	Intergenic	novelGene_29699	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_8	19.576372876506	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTCCTACTTTTC	NA	False	NA	6	True	ATTAAA	-12	NA	41757	52726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_51545_51650_51730_52234
ES.36508.26	chrUn_JH584304v1	+	3770	7	Intergenic	novelGene_29701	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	7.66847804688489	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTCTCCTACTTTTC	NA	False	NA	6	True	ATTAAA	-12	NA	47244	52726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_47678_47923_47999_48581_48657_48768_48946_49051_51545_51650_51730_52288
ES.36508.27	chrUn_JH584304v1	+	4019	4	Intergenic	novelGene_29702	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	5.8878405775519	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTCCTACTTTTCA	NA	False	NA	7	True	ATTAAA	-13	NA	47907	52727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_47999_48581_48657_48768_48946_49051
ES.36508.3	chrUn_JH584304v1	+	7043	5	Intergenic	novelGene_29673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_2	5.85234995535981	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	19260	35535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_19346_20219_20377_24796_24959_26983_29520_31432
ES.36508.4	chrUn_JH584304v1	+	4552	4	Intergenic	novelGene_29675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	4.54606056566195	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGTTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	20219	33129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_20377_24796_24959_26983_29520_31432
ES.36508.5	chrUn_JH584304v1	+	7210	19	Intergenic	novelGene_29676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_16	20.0914575545595	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCTACTTTTCATACAA	NA	False	NA	12	True	ATTAAA	-18	NA	20233	52732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_20377_24796_29520_31432_31500_38114_38246_39081_39164_39432_39612_40110_40187_41049_41127_41974_42078_44213_44311_47496_47678_47923_47999_48581_48657_48768_48946_49051_49312_49863_49969_51408_51545_51650_51730_52288
ES.36508.6	chrUn_JH584304v1	+	5840	22	Intergenic	novelGene_29677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_7	18.3837895663778	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	NA	False	NA	9	True	ATTAAA	-15	NA	24920	52729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_28146_29421_29520_31432_31500_38114_38246_39081_39164_39432_39612_40110_40187_40595_40692_41049_41127_41974_42078_44213_44311_47516_47678_47923_47999_48581_48657_48768_48946_49051_49312_49863_49969_50092_50277_51408_51545_51650_51730_52288_52401_52484
ES.36508.7	chrUn_JH584304v1	+	6478	3	Intergenic	novelGene_29680	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	25	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	27066	35507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_29520_31432_33245_33294
ES.36508.8	chrUn_JH584304v1	+	3887	2	Intergenic	novelGene_29682	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	31570	35507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_33251_33300
ES.36508.9	chrUn_JH584304v1	+	3892	2	Intergenic	novelGene_29683	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31601	35543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_33227_33276
ES.36509.1	chrUn_JH584304v1	+	4626	5	Intergenic	novelGene_29871	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAAAACGTGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	53179	60328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_54477_54718_54868_55111_55704_56986_58830_59583
ES.36509.2	chrUn_JH584304v1	+	1801	1	Intergenic	novelGene_29879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAAAACGTGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	58527	60328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_58500_60300
ES.36509.3	chrUn_JH584304v1	+	162	1	Intergenic	novelGene_29880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAATTAGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	59263	59425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_+_59300_59400
ES.3651.1	chr10	-	176	1	Intergenic	novelGene_2792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95520722	95520546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95520500_95520700
ES.36510.1	chrUn_JH584304v1	-	144	1	Intergenic	novelGene_29671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	10651	10507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_10500_10700
ES.36510.10	chrUn_JH584304v1	-	6305	4	Intergenic	novelGene_29704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_3	95.6114823415868	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCTGTCTTCCCCAGC	NA	False	NA	-32	True	AATAAA	-23	NA	59731	52185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59591
ES.36510.100	chrUn_JH584304v1	-	3380	5	Intergenic	novelGene_29797	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	137.066589656269	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59744	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.101	chrUn_JH584304v1	-	2679	4	Intergenic	novelGene_29788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_3	398.479610519786	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59722	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_59591
ES.36510.102	chrUn_JH584304v1	-	2732	6	Intergenic	novelGene_29798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59766	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.104	chrUn_JH584304v1	-	2862	7	Intergenic	novelGene_29795	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	293.733817521162	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59735	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55244_55511_55702_56985_57152_58563_58836_59591
ES.36510.106	chrUn_JH584304v1	-	6998	1	Intergenic	novelGene_29778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59666	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52700_59700
ES.36510.107	chrUn_JH584304v1	-	3033	7	Intergenic	novelGene_29784	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_3	269.274797681971	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59720	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55212_55293_55702_56985_57152_58563_58836_59591
ES.36510.108	chrUn_JH584304v1	-	2823	5	Intergenic	novelGene_29781	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_4	349.301714138365	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59700	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_59591
ES.36510.109	chrUn_JH584304v1	-	2943	5	Intergenic	novelGene_29773	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	384.579884419349	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59036	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55216_55293_55702_58563
ES.36510.11	chrUn_JH584304v1	-	5129	5	Intergenic	novelGene_29707	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	233.283491700549	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCTGTCTTCCCCAG	NA	False	NA	-33	True	AATAAA	-22	NA	59724	52186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_58836_59591
ES.36510.110	chrUn_JH584304v1	-	3459	6	Intergenic	novelGene_29792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_3	296.852421246652	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59731	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.111	chrUn_JH584304v1	-	4065	6	Intergenic	novelGene_29775	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	319.413462458926	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59662	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_58160_58563_58836_59591
ES.36510.112	chrUn_JH584304v1	-	3504	3	Intergenic	novelGene_29793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	450	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59731	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_58563
ES.36510.115	chrUn_JH584304v1	-	4334	3	Intergenic	novelGene_29780	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	442.5	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59686	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_57152_59591
ES.36510.118	chrUn_JH584304v1	-	2490	5	Intergenic	novelGene_29771	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_1	355.497187049349	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	58991	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55702_58563
ES.36510.119	chrUn_JH584304v1	-	4236	2	Intergenic	novelGene_29770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	1325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	57330	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55293
ES.36510.12	chrUn_JH584304v1	-	3620	6	Intergenic	novelGene_29708	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCTGTCTTCCCCAG	NA	False	NA	-33	True	AATAAA	-22	NA	59743	52186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.120	chrUn_JH584304v1	-	2626	7	Intergenic	novelGene_29776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	338.850999703409	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59665	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58734_58836_59591
ES.36510.123	chrUn_JH584304v1	-	2461	5	Intergenic	novelGene_29785	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_4	401.075429314736	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59720	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_59591
ES.36510.124	chrUn_JH584304v1	-	2344	8	Intergenic	novelGene_29794	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	302.330404473959	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59731	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.125	chrUn_JH584304v1	-	2914	7	Intergenic	novelGene_29796	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	256.761508451369	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59735	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.126	chrUn_JH584304v1	-	4847	3	Intergenic	novelGene_29779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_1	77	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59683	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_57152_58563_58836_59591
ES.36510.127	chrUn_JH584304v1	-	3030	4	Intergenic	novelGene_29772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_2	347.835529461203	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59020	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55464_55702_58563
ES.36510.129	chrUn_JH584304v1	-	2850	6	Intergenic	novelGene_29782	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	26	junction_3	343.92127006046	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59702	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55431_55511_55702_58563_58836_59591
ES.36510.131	chrUn_JH584304v1	-	3195	4	Intergenic	novelGene_29791	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_2	279.385436668095	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59725	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_58563_58836_59591
ES.36510.132	chrUn_JH584304v1	-	3008	4	Intergenic	novelGene_29786	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	275.460019280879	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59720	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55293_55702_58563_58836_59591
ES.36510.133	chrUn_JH584304v1	-	3482	7	Intergenic	novelGene_29800	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_4	312.424213032359	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59998	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.136	chrUn_JH584304v1	-	2920	3	Intergenic	novelGene_29833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	439.5	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59744	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_59591
ES.36510.137	chrUn_JH584304v1	-	2351	7	Intergenic	novelGene_29823	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	352.436597923024	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59715	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_58734_58836_59591
ES.36510.138	chrUn_JH584304v1	-	4629	4	Intergenic	novelGene_29831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_2	157.35522446575	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59731	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_57152_58563_58836_59591
ES.36510.139	chrUn_JH584304v1	-	2527	7	Intergenic	novelGene_29825	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	266.626715757359	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59720	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.14	chrUn_JH584304v1	-	5439	3	Intergenic	novelGene_29705	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_1	4.5	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCTGTCTTCCCCAG	NA	False	NA	-33	True	AATAAA	-22	NA	59665	52186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_56985_58836_59591
ES.36510.140	chrUn_JH584304v1	-	2826	6	Intergenic	novelGene_29824	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	351.320138904675	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59715	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55431_55526_55702_58563_58836_59591
ES.36510.141	chrUn_JH584304v1	-	3099	8	Intergenic	novelGene_29835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_4	326.722999446545	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59916	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55212_55293_55404_55511_55702_56985_57152_58563_58836_59591
ES.36510.143	chrUn_JH584304v1	-	2902	7	Intergenic	novelGene_29826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	347.787770534464	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59720	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55187_55249_55367_55702_56981_57152_58563_58836_59591
ES.36510.144	chrUn_JH584304v1	-	2707	4	Intergenic	novelGene_29822	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	381.907784099193	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59712	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_58563_58836_59591
ES.36510.145	chrUn_JH584304v1	-	3354	4	Intergenic	novelGene_29811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	408.352788652165	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59662	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55431_58563
ES.36510.146	chrUn_JH584304v1	-	3350	5	Intergenic	novelGene_29805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	329.762319709211	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59026	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563_58965_59010
ES.36510.147	chrUn_JH584304v1	-	1961	7	Intergenic	novelGene_29803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_1	310.253346297649	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58581	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563
ES.36510.148	chrUn_JH584304v1	-	3569	5	Intergenic	novelGene_29807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	384.579884419349	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59652	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58965_59010
ES.36510.149	chrUn_JH584304v1	-	4719	4	Intergenic	novelGene_29816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_2	110.1342614973	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59693	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_58836_59591
ES.36510.15	chrUn_JH584304v1	-	3581	5	Intergenic	novelGene_29706	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	26	junction_2	346.66338139469	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCTTCTGTCTTCCCCAG	NA	False	NA	-33	True	AATAAA	-22	NA	59710	52186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55431_55511_55702_58563_58836_59591
ES.36510.150	chrUn_JH584304v1	-	1963	7	Intergenic	novelGene_29810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	348.950211348267	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59659	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53696_54335_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.151	chrUn_JH584304v1	-	2526	7	Intergenic	novelGene_29813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	293.395495307387	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59673	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53816_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.152	chrUn_JH584304v1	-	4105	2	Intergenic	novelGene_29809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_1	0	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59657	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_58563
ES.36510.153	chrUn_JH584304v1	-	2593	7	Intergenic	novelGene_29819	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_1	262.009806856325	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59706	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.155	chrUn_JH584304v1	-	2758	4	Intergenic	novelGene_29814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	419.158151006939	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59678	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55431_55526_55702_59591
ES.36510.156	chrUn_JH584304v1	-	2605	6	Intergenic	novelGene_29827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_5	368.869299345988	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59720	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_59591
ES.36510.157	chrUn_JH584304v1	-	6550	3	Intergenic	novelGene_29829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	828	junction_1	36	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59725	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111
ES.36510.159	chrUn_JH584304v1	-	4300	6	Intergenic	novelGene_29832	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	320.157086443514	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59731	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55206_55293_57152_58563_58836_59591
ES.36510.16	chrUn_JH584304v1	-	2438	7	Intergenic	novelGene_29721	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	199.023170063745	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59731	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.160	chrUn_JH584304v1	-	6205	3	Intergenic	novelGene_29806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	450	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59185	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_58965_59010
ES.36510.161	chrUn_JH584304v1	-	2618	6	Intergenic	novelGene_29804	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	365.164291792064	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58886	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58697
ES.36510.162	chrUn_JH584304v1	-	3055	6	Intergenic	novelGene_29818	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_2	247.844628749545	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59704	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.163	chrUn_JH584304v1	-	2255	4	Intergenic	novelGene_29812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	359.084329309364	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59665	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54846_58568_58836_59591
ES.36510.164	chrUn_JH584304v1	-	2868	5	Intergenic	novelGene_29815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_2	310.752614630995	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59683	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.165	chrUn_JH584304v1	-	4925	3	Intergenic	novelGene_29808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_1	4.5	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59655	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_56985_58836_59591
ES.36510.166	chrUn_JH584304v1	-	2829	5	Intergenic	novelGene_29817	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	384.579884419349	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59699	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58831_59663
ES.36510.167	chrUn_JH584304v1	-	2749	8	Intergenic	novelGene_29834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_1	330.568341756177	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59773	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.168	chrUn_JH584304v1	-	2655	7	Intergenic	novelGene_29820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	383.320760663384	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59706	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58734_58836_59581
ES.36510.169	chrUn_JH584304v1	-	2764	7	Intergenic	novelGene_29828	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	26	junction_4	357.24754100701	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59720	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55212_55293_55431_55511_55702_58563_58836_59591
ES.36510.17	chrUn_JH584304v1	-	2025	9	Intergenic	novelGene_29717	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	95	junction_2	315.6043557605	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59715	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.171	chrUn_JH584304v1	-	2285	5	Intergenic	novelGene_29830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	10	junction_1	351.658214748355	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59725	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54720_54868_55111_55702_58563_58836_59591
ES.36510.172	chrUn_JH584304v1	-	2606	8	Intergenic	novelGene_29821	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	332.967608892259	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59710	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.173	chrUn_JH584304v1	-	2244	6	Intergenic	novelGene_29802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	396.406558977018	1325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	57339	52690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53816_54335_54480_54720_54868_55111_55702_56985_57152_57267
ES.36510.174	chrUn_JH584304v1	-	2512	7	Intergenic	novelGene_29836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	347.052709733454	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59704	52695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56979_57152_58563_58836_59591
ES.36510.175	chrUn_JH584304v1	-	2662	6	Intergenic	novelGene_29837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTCCTGGGCTCTGT	NA	False	NA	-1	True	AGTAAA	-21	NA	59731	53132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.176	chrUn_JH584304v1	-	1640	7	Intergenic	novelGene_29838	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	339.783100750399	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGTCCTGGGCTCTG	NA	False	NA	-2	True	AGTAAA	-20	NA	59658	53133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
ES.36510.177	chrUn_JH584304v1	-	2805	7	Intergenic	novelGene_29841	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_4	312.424213032359	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGTCCTGGGCTCTG	NA	False	NA	-2	True	AGTAAA	-20	NA	59786	53133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.178	chrUn_JH584304v1	-	5598	3	Intergenic	novelGene_29840	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_2	114.5	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGTCCTGGGCTCTG	NA	False	NA	-2	True	AGTAAA	-20	NA	59731	53133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_58836_59591
ES.36510.179	chrUn_JH584304v1	-	2434	5	Intergenic	novelGene_29839	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTGTCCTGGGCTCTG	NA	False	NA	-2	True	AGTAAA	-20	NA	59670	53133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.18	chrUn_JH584304v1	-	6539	3	Intergenic	novelGene_29720	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_2	114.5	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59727	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_58836_59591
ES.36510.181	chrUn_JH584304v1	-	2165	6	Intergenic	novelGene_29842	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59665	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.182	chrUn_JH584304v1	-	2381	7	Intergenic	novelGene_29848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	244.42818759073	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59715	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.183	chrUn_JH584304v1	-	2492	7	Intergenic	novelGene_29856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	256.761508451369	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59779	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.184	chrUn_JH584304v1	-	3134	4	Intergenic	novelGene_29850	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_2	70.5706895405041	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59720	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_56985_57152_58563_58836_59591
ES.36510.188	chrUn_JH584304v1	-	5356	4	Intergenic	novelGene_29852	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_3	95.6114823415868	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59731	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59591
ES.36510.189	chrUn_JH584304v1	-	1622	7	Intergenic	novelGene_29844	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	333.3316666625	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59688	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.191	chrUn_JH584304v1	-	2262	6	Intergenic	novelGene_29849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59715	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
ES.36510.192	chrUn_JH584304v1	-	2912	5	Intergenic	novelGene_29855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	137.066589656269	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59742	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.193	chrUn_JH584304v1	-	2283	7	Intergenic	novelGene_29846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	346.280072901819	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59704	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58697_58836_59591
ES.36510.194	chrUn_JH584304v1	-	2094	7	Intergenic	novelGene_29853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	266.626715757359	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59731	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.195	chrUn_JH584304v1	-	2441	5	Intergenic	novelGene_29845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_2	310.752614630995	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59700	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.196	chrUn_JH584304v1	-	1958	5	Intergenic	novelGene_29843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_4	401.075429314736	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59683	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_59591
ES.36510.197	chrUn_JH584304v1	-	2378	5	Intergenic	novelGene_29851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_4	349.301714138365	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59721	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_59591
ES.36510.198	chrUn_JH584304v1	-	2533	8	Intergenic	novelGene_29854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	327.894457882722	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59731	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.199	chrUn_JH584304v1	-	2147	7	Intergenic	novelGene_29847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_1	262.009806856325	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	59704	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.2	chrUn_JH584304v1	-	135	2	Intergenic	novelGene_29672	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30529	10514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_10640_30519
ES.36510.20	chrUn_JH584304v1	-	1621	7	Intergenic	novelGene_29719	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	330.691699321286	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59720	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53696_54335_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.200	chrUn_JH584304v1	-	2771	3	Intergenic	novelGene_29857	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	439.5	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	60039	53134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_59591
ES.36510.201	chrUn_JH584304v1	-	4013	5	Intergenic	novelGene_29858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_3	102.027876092762	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTGTTGTCCTGGGCTC	NA	False	NA	-4	True	AGTAAA	-18	NA	59673	53135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_58836_59591
ES.36510.202	chrUn_JH584304v1	-	1964	7	Intergenic	novelGene_29861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	343.545565472115	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59035	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53833_54318_54480_54720_54868_55111_55244_55511_55702_56985_57152_58563
ES.36510.203	chrUn_JH584304v1	-	4251	4	Intergenic	novelGene_29862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_2	110.1342614973	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59671	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_58836_59591
ES.36510.204	chrUn_JH584304v1	-	5839	2	Intergenic	novelGene_29865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59731	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_58836_59591
ES.36510.205	chrUn_JH584304v1	-	2452	6	Intergenic	novelGene_29859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	14	junction_1	366.399563318517	1315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	57881	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53271_53535_54480_54720_54868_55111_55702_56985_57152_57410
ES.36510.206	chrUn_JH584304v1	-	4240	3	Intergenic	novelGene_29860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_2	191.5	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59032	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_57152_58563
ES.36510.207	chrUn_JH584304v1	-	5056	3	Intergenic	novelGene_29864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_2	119	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59720	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985
ES.36510.208	chrUn_JH584304v1	-	5225	4	Intergenic	novelGene_29863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	359.084329309364	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTGTTGTCCTGGGCT	NA	False	NA	-5	True	AGTAAA	-17	NA	59678	53136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55187_58836_59591
ES.36510.21	chrUn_JH584304v1	-	1576	8	Intergenic	novelGene_29710	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	323.399733696709	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	58955	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53710_54335_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563
ES.36510.211	chrUn_JH584304v1	-	3339	7	Intergenic	novelGene_29868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	14	junction_1	289.004998034444	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGATGTGTTGTCCTGG	NA	False	NA	-8	True	AGTAAA	-14	NA	60680	53139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53271_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.212	chrUn_JH584304v1	-	2709	4	Intergenic	novelGene_29866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_2	279.385436668095	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGATGTGTTGTCCTGG	NA	False	NA	-8	True	AGTAAA	-14	NA	59710	53139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_58563_58836_59591
ES.36510.213	chrUn_JH584304v1	-	5346	4	Intergenic	novelGene_29867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	408.352788652165	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGATGTGTTGTCCTGG	NA	False	NA	-8	True	AGTAAA	-14	NA	59716	53139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59581
ES.36510.215	chrUn_JH584304v1	-	1895	4	Intergenic	novelGene_29869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	408.352788652165	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGGATGTGTTGTCC	NA	False	NA	-11	True	AGTAAA	-11	NA	58837	53142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_58563
ES.36510.216	chrUn_JH584304v1	-	2871	5	Intergenic	novelGene_29870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	110.042037422069	1317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTGGATGTGTTGTC	NA	False	NA	-12	True	AGTAAA	-10	NA	59707	53143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_55702_56985_57152_58563_58836_59591
ES.36510.217	chrUn_JH584304v1	-	1595	5	Intergenic	novelGene_29872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	148.706716391695	1246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATGATCTAGCTCTGC	NA	False	NA	NA	False	TATAAA	-14	NA	59003	54227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563
ES.36510.218	chrUn_JH584304v1	-	1308	6	Intergenic	novelGene_29873	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	1233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCGTGTAGTCCTAAC	NA	False	NA	NA	False	NA	NA	NA	59665	54420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.219	chrUn_JH584304v1	-	1364	6	Intergenic	novelGene_29874	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	320.157086443514	1233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCGTGTAGTCCTAAC	NA	False	NA	NA	False	NA	NA	NA	59714	54420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55709_56985_57152_58563_58836_59591
ES.36510.220	chrUn_JH584304v1	-	1582	4	Intergenic	novelGene_29875	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	157.888146061276	1222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTAGCATATTCTCTT	NA	False	NA	NA	False	GGGGCT	-5	NA	59031	54509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563
ES.36510.221	chrUn_JH584304v1	-	3312	2	Intergenic	novelGene_29876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_1	0	1169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGCTTAGCAGCACC	NA	False	NA	NA	False	AATGAA	-17	NA	60002	55406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_56985
ES.36510.222	chrUn_JH584304v1	-	3989	1	Intergenic	novelGene_29878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGATCAACTCAGC	NA	False	NA	-4	True	NA	NA	NA	59731	55742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55700_59700
ES.36510.223	chrUn_JH584304v1	-	1809	3	Intergenic	novelGene_29877	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_1	77	1135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGATCAACTCAGC	NA	False	NA	-4	True	NA	NA	NA	59719	55742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_57152_58563_58836_59591
ES.36510.23	chrUn_JH584304v1	-	3119	6	Intergenic	novelGene_29714	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59673	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.24	chrUn_JH584304v1	-	1716	6	Intergenic	novelGene_29715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	398.301092140105	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59686	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52392_53535_54480_54720_54868_55111_55249_55511_55702_59591
ES.36510.25	chrUn_JH584304v1	-	2199	6	Intergenic	novelGene_29713	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_4	274.719202095522	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59658	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.26	chrUn_JH584304v1	-	1658	9	Intergenic	novelGene_29716	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	285.144590515058	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59700	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.27	chrUn_JH584304v1	-	2537	4	Intergenic	novelGene_29711	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	302.3070550873	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	58999	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54868_55111_55702_58563
ES.36510.28	chrUn_JH584304v1	-	1872	8	Intergenic	novelGene_29722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	270.17454675503	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59731	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.29	chrUn_JH584304v1	-	2416	7	Intergenic	novelGene_29712	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_4	290.220031470377	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59035	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55212_55293_55702_56985_57152_58563
ES.36510.3	chrUn_JH584304v1	-	135	1	Intergenic	novelGene_29674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	19931	19796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_19800_19900
ES.36510.30	chrUn_JH584304v1	-	1596	9	Intergenic	novelGene_29718	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	287.746416137543	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59718	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.32	chrUn_JH584304v1	-	1641	6	Intergenic	novelGene_29709	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_4	295.364181985562	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	57029	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55511_55702_56985
ES.36510.33	chrUn_JH584304v1	-	3847	5	Intergenic	novelGene_29723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	137.066589656269	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59731	52188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.34	chrUn_JH584304v1	-	1444	6	Intergenic	novelGene_29727	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_5	367.898355527719	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59662	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_59591
ES.36510.36	chrUn_JH584304v1	-	1636	7	Intergenic	novelGene_29729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_6	348.271445857969	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59688	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_59591
ES.36510.37	chrUn_JH584304v1	-	2005	9	Intergenic	novelGene_29730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	317.672763036115	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59776	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.38	chrUn_JH584304v1	-	1537	7	Intergenic	novelGene_29725	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	10	junction_2	304.208627242701	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	58985	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54720_54868_55111_55249_55511_55702_56985_57152_58563
ES.36510.39	chrUn_JH584304v1	-	2132	7	Intergenic	novelGene_29724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	333.334999995833	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	58926	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55511_55709_56985_57152_58563
ES.36510.4	chrUn_JH584304v1	-	2114	5	Intergenic	novelGene_29678	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	223.867566878277	1338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTAAAGGCCCTCCG	NA	False	NA	NA	False	NA	NA	NA	59035	24950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_25027_37137_37220_46246_46316_55736_57152_58563
ES.36510.41	chrUn_JH584304v1	-	3987	2	Intergenic	novelGene_29726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_1	0	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59038	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_55702_58563
ES.36510.42	chrUn_JH584304v1	-	3781	6	Intergenic	novelGene_29728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	208.708025720143	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59663	52189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_58836_59591
ES.36510.44	chrUn_JH584304v1	-	2428	7	Intergenic	novelGene_29732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	311.244634045669	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAATCTTCTGTCTTCC	NA	False	NA	-37	True	AATAAA	-18	NA	59716	52190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55709_56985_57152_58563_58836_59591
ES.36510.45	chrUn_JH584304v1	-	3450	5	Intergenic	novelGene_29733	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAATCTTCTGTCTTCC	NA	False	NA	-37	True	AATAAA	-18	NA	59743	52190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.46	chrUn_JH584304v1	-	3663	3	Intergenic	novelGene_29731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_2	336.5	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAATCTTCTGTCTTCC	NA	False	NA	-37	True	AATAAA	-18	NA	58959	52190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_58563
ES.36510.47	chrUn_JH584304v1	-	5075	4	Intergenic	novelGene_29738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_2	157.35522446575	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59678	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_57152_58563_58836_59591
ES.36510.48	chrUn_JH584304v1	-	3127	4	Intergenic	novelGene_29739	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_3	398.479610519786	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59693	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_59591
ES.36510.49	chrUn_JH584304v1	-	3340	5	Intergenic	novelGene_29736	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_2	310.752614630995	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59656	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.5	chrUn_JH584304v1	-	3203	6	Intergenic	novelGene_29679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	268.2011185659	1338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTAAAGGCCCTCCG	NA	False	NA	NA	False	NA	NA	NA	59731	24950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_25027_37137_37220_46246_46316_55736_58301_58563_58836_59591
ES.36510.50	chrUn_JH584304v1	-	3544	8	Intergenic	novelGene_29737	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	73	junction_3	334.363116802005	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59665	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55212_55293_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.51	chrUn_JH584304v1	-	5869	3	Intergenic	novelGene_29740	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_2	191.5	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59716	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_57152_58563
ES.36510.52	chrUn_JH584304v1	-	3445	7	Intergenic	novelGene_29735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	344.983091373089	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	58944	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_57410_57500_58563
ES.36510.54	chrUn_JH584304v1	-	1520	8	Intergenic	novelGene_29742	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	312.652118078185	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59731	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.55	chrUn_JH584304v1	-	3400	5	Intergenic	novelGene_29734	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	408.758715503413	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	57706	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52392_53535_53833_54318_54480_54720_54868_55111
ES.36510.56	chrUn_JH584304v1	-	2524	8	Intergenic	novelGene_29743	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_5	302.837398278215	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59731	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.57	chrUn_JH584304v1	-	3376	7	Intergenic	novelGene_29741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	256.761508451369	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAATCTTCTGTCTTC	NA	False	NA	-38	True	AATAAA	-17	NA	59720	52191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.59	chrUn_JH584304v1	-	2455	7	Intergenic	novelGene_29758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	291.705140319619	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59731	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52392_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.6	chrUn_JH584304v1	-	5021	2	Intergenic	novelGene_29681	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCAAAACTGGACCAGTA	NA	False	NA	NA	False	NA	NA	NA	35460	30364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_33219_33293
ES.36510.60	chrUn_JH584304v1	-	1716	7	Intergenic	novelGene_29748	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	310.093220750721	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59668	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.61	chrUn_JH584304v1	-	3226	7	Intergenic	novelGene_29749	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	354.880104949388	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59673	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55709_56985_58836_59591
ES.36510.62	chrUn_JH584304v1	-	3431	5	Intergenic	novelGene_29753	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_2	321.33345219569	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59704	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55464_55702_58563_58836_59591
ES.36510.63	chrUn_JH584304v1	-	5241	4	Intergenic	novelGene_29755	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_2	110.1342614973	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59720	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_56985_58836_59591
ES.36510.64	chrUn_JH584304v1	-	3498	6	Intergenic	novelGene_29746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_2	247.844628749545	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59652	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.65	chrUn_JH584304v1	-	3738	6	Intergenic	novelGene_29744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_4	337.269980875856	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59025	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563
ES.36510.66	chrUn_JH584304v1	-	2215	8	Intergenic	novelGene_29759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_4	262.594589371805	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59731	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.67	chrUn_JH584304v1	-	1945	8	Intergenic	novelGene_29760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	266.612613569362	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59731	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.68	chrUn_JH584304v1	-	1721	8	Intergenic	novelGene_29750	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	333.462539584467	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59678	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_58734_58836_59591
ES.36510.69	chrUn_JH584304v1	-	3600	7	Intergenic	novelGene_29751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	314.495230488477	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59699	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54043_54480_54720_54868_55111_55702_56985_58836_59591
ES.36510.7	chrUn_JH584304v1	-	3087	8	Intergenic	novelGene_29693	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	335.383545286556	1335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTATGCAGTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	59665	37735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_39579_44740_44999_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.70	chrUn_JH584304v1	-	3352	6	Intergenic	novelGene_29752	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	351.61877083	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59699	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58625_58673_58836_59591
ES.36510.72	chrUn_JH584304v1	-	5068	4	Intergenic	novelGene_29745	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	368.778464061495	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59038	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_55249_55367_57152_58563
ES.36510.73	chrUn_JH584304v1	-	1485	8	Intergenic	novelGene_29754	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	350.563918885686	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59710	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53696_54335_54480_54720_54868_55111_55249_55367_55702_58563_58836_59591
ES.36510.74	chrUn_JH584304v1	-	4551	6	Intergenic	novelGene_29756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	315.837553182012	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59721	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_58836_59591
ES.36510.75	chrUn_JH584304v1	-	3262	7	Intergenic	novelGene_29747	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	244.42818759073	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59657	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.76	chrUn_JH584304v1	-	2039	7	Intergenic	novelGene_29757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_4	306.623955359003	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	-42	True	AATAAA	-13	NA	59721	52195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
ES.36510.79	chrUn_JH584304v1	-	2627	6	Intergenic	novelGene_29763	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	198.880265486548	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGCCAACAATCTTCT	NA	False	NA	-44	True	AATAAA	-11	NA	59688	52197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.8	chrUn_JH584304v1	-	1286	2	Intergenic	novelGene_29700	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCAATTATATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	48463	44670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_44999_47505
ES.36510.80	chrUn_JH584304v1	-	1771	9	Intergenic	novelGene_29762	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	312.025414629962	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGCCAACAATCTTCT	NA	False	NA	-44	True	AATAAA	-11	NA	59678	52197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55249_55367_55702_56985_57152_58563_58836_59591
ES.36510.82	chrUn_JH584304v1	-	1658	9	Intergenic	novelGene_29761	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	291.444677426094	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGCCAACAATCTTCT	NA	False	NA	-44	True	AATAAA	-11	NA	59662	52197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
ES.36510.83	chrUn_JH584304v1	-	2661	8	Intergenic	novelGene_29765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	312.327536083385	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAATGGCCAACAATCTT	NA	False	NA	-46	True	AATAAA	-9	NA	59700	52199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_53696_54335_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
ES.36510.84	chrUn_JH584304v1	-	1506	7	Intergenic	novelGene_29764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	345.738179680649	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAATGGCCAACAATCTT	NA	False	NA	-46	True	AATAAA	-9	NA	58988	52199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53784_54335_54480_54720_54868_55111_55249_55464_55702_58563
ES.36510.85	chrUn_JH584304v1	-	1934	7	Intergenic	novelGene_29766	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_4	298.70019343073	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAATGGCCAACAATCT	NA	False	NA	-47	True	AATAAA	-8	NA	59668	52200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
ES.36510.86	chrUn_JH584304v1	-	4347	5	Intergenic	novelGene_29767	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	147.775167061316	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTTGAATTTTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	59665	52665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_57152_58563_58836_59591
ES.36510.88	chrUn_JH584304v1	-	6076	3	Intergenic	novelGene_29769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_2	114.5	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATAGCTTTGAATTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	59743	52667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54868_55111_58836_59591
ES.36510.89	chrUn_JH584304v1	-	5274	4	Intergenic	novelGene_29768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	662	junction_3	99.6571901849313	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATAGCTTTGAATTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	59710	52667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985
ES.36510.9	chrUn_JH584304v1	-	3042	8	Intergenic	novelGene_29703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	333.040476794749	1329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTGTCTTCCCCAGCA	NA	False	NA	-31	True	AATAAA	-24	NA	59668	52184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_58301_58563_58836_59591
ES.36510.90	chrUn_JH584304v1	-	3305	5	Intergenic	novelGene_29801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	60076	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
ES.36510.91	chrUn_JH584304v1	-	3191	6	Intergenic	novelGene_29799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59796	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
ES.36510.92	chrUn_JH584304v1	-	3097	7	Intergenic	novelGene_29774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	376.40211948866	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59201	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55709_56985_57152_58563_58965_59010
ES.36510.93	chrUn_JH584304v1	-	6951	2	Intergenic	novelGene_29777	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59665	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_58965_59010
ES.36510.94	chrUn_JH584304v1	-	5804	4	Intergenic	novelGene_29783	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_3	95.6114823415868	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59713	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59591
ES.36510.95	chrUn_JH584304v1	-	6300	2	Intergenic	novelGene_29789	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_1	0	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59724	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_58836_59591
ES.36510.98	chrUn_JH584304v1	-	2941	8	Intergenic	novelGene_29787	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_5	321.845443957062	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59720	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_57410_57500_58563_58836_59591
ES.36510.99	chrUn_JH584304v1	-	2737	6	Intergenic	novelGene_29790	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	1327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59724	52668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
ES.36511.1	chrUn_MU069435v1	+	552	1	Intergenic	novelGene_29881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	862	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGGCTTTCCCGTGGCA	NA	False	NA	29	True	NA	NA	NA	37	589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_0_600
ES.36511.2	chrUn_MU069435v1	+	712	1	Intergenic	novelGene_29883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	863	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGAGGGCGGAGGA	NA	False	NA	NA	False	NA	NA	NA	141	853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_100_900
ES.36512.1	chrUn_MU069435v1	-	253	1	Intergenic	novelGene_29882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTATTAGTGGGTGAA	NA	False	NA	NA	False	NA	NA	NA	295	42	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_0_300
ES.36513.1	chrUn_MU069435v1	+	110	1	Intergenic	novelGene_29886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTTCTTCCAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	3313	3423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_3300_3400
ES.36514.1	chrUn_MU069435v1	-	2416	1	Intergenic	novelGene_29884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCCGGGGTGGCCCCGC	NA	False	NA	NA	False	NA	NA	NA	3724	1308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_1300_3700
ES.36514.2	chrUn_MU069435v1	-	145	1	Intergenic	novelGene_29885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TATAAA	-44	NA	1659	1514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_1500_1700
ES.36515.1	chrUn_MU069435v1	+	159	1	Intergenic	novelGene_29889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	5854	6013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_5900_6000
ES.36516.1	chrUn_MU069435v1	-	236	2	Intergenic	novelGene_29887	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTAGAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	6760	4423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_4475_6575
ES.36516.2	chrUn_MU069435v1	-	238	1	Intergenic	novelGene_29888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATGTTTAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	4670	4432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_4400_4700
ES.36516.3	chrUn_MU069435v1	-	425	1	Intergenic	novelGene_29890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	6762	6337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_6300_6800
ES.36516.4	chrUn_MU069435v1	-	217	1	Intergenic	novelGene_29891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTCAAATGAATAAATG	NA	False	NA	NA	False	AAGAAA	-19	NA	6762	6545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_6500_6800
ES.36517.1	chrUn_MU069435v1	+	256	1	Intergenic	novelGene_29892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTCTCCAGCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	7369	7625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_7400_7600
ES.36518.1	chrUn_MU069435v1	-	136	1	Intergenic	novelGene_29893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8297	8161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_8200_8300
ES.36519.1	chrUn_MU069435v1	-	130	1	Intergenic	novelGene_29894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAAAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	10291	10161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_10200_10300
ES.3652.1	chr10	-	259	1	Intergenic	novelGene_2793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATGGCAAGCCACA	-5	True	NA	NA	False	AAGAAA	-39	NA	95548933	95548674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95548700_95548900
ES.36520.1	chrUn_MU069435v1	+	197	1	Intergenic	novelGene_29897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTCCTAAAATTCAT	NA	False	NA	NA	False	NA	NA	NA	11767	11964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_11800_12000
ES.36521.1	chrUn_MU069435v1	+	379	1	Intergenic	novelGene_29899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	GATAAA	-45	NA	13188	13567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_13200_13600
ES.36522.1	chrUn_MU069435v1	+	591	3	Intergenic	novelGene_29900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	10.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTCTCCAGCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	13834	15284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_14170_14906_14964_15085
ES.36523.1	chrUn_MU069435v1	+	296	1	Intergenic	novelGene_29910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTCGAGCTATCTAAA	NA	False	NA	NA	False	AATAAA	-32	NA	21778	22074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_+_21800_22100
ES.36524.1	chrUn_MU069435v1	-	1829	2	Intergenic	novelGene_29896	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAGTCA	NA	False	NA	NA	False	NA	NA	NA	27229	10314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_10396_25481
ES.36524.10	chrUn_MU069435v1	-	718	1	Intergenic	novelGene_29907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	22021	21303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_21300_22000
ES.36524.11	chrUn_MU069435v1	-	788	1	Intergenic	novelGene_29908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	22223	21435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_21400_22200
ES.36524.12	chrUn_MU069435v1	-	174	1	Intergenic	novelGene_29909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAAGGGGGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	21941	21767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_21800_21900
ES.36524.13	chrUn_MU069435v1	-	2189	1	Intergenic	novelGene_29911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATGAAGGTAG	NA	False	NA	NA	False	NA	NA	NA	24757	22568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_22600_24800
ES.36524.14	chrUn_MU069435v1	-	821	1	Intergenic	novelGene_29912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	26343	25522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_25500_26300
ES.36524.15	chrUn_MU069435v1	-	2846	1	Intergenic	novelGene_29913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCCTTCATGATC	NA	False	NA	NA	False	NA	NA	NA	29465	26619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_26600_29500
ES.36524.16	chrUn_MU069435v1	-	365	1	Intergenic	novelGene_29914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	28002	27637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_27600_28000
ES.36524.17	chrUn_MU069435v1	-	254	1	Intergenic	novelGene_29915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGCATTTGAAAAGCAGA	NA	False	NA	NA	False	AAGAAA	-43	NA	28003	27749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_27700_28000
ES.36524.18	chrUn_MU069435v1	-	309	1	Intergenic	novelGene_29916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACTCAGACTGAAGAC	NA	False	NA	NA	False	AATAAA	-36	NA	28442	28133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_28100_28400
ES.36524.2	chrUn_MU069435v1	-	698	2	Intergenic	novelGene_29895	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAGTCA	NA	False	NA	NA	False	NA	NA	NA	26114	10314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_10392_25493
ES.36524.3	chrUn_MU069435v1	-	213	1	Intergenic	novelGene_29898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCCTTTCCAGTAAC	NA	False	NA	NA	False	AATAAA	-23	NA	12922	12709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_12700_12900
ES.36524.4	chrUn_MU069435v1	-	743	2	Intergenic	novelGene_29901	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21937	14452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_14631_21372
ES.36524.5	chrUn_MU069435v1	-	1032	1	Intergenic	novelGene_29902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	15569	14537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_14500_15600
ES.36524.6	chrUn_MU069435v1	-	930	1	Intergenic	novelGene_29903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	15595	14665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_14700_15600
ES.36524.7	chrUn_MU069435v1	-	173	1	Intergenic	novelGene_29904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGAAGGGGGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	15170	14997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_15000_15200
ES.36524.8	chrUn_MU069435v1	-	1263	2	Intergenic	novelGene_29905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17988	15832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_16472_17364
ES.36524.9	chrUn_MU069435v1	-	592	3	Intergenic	novelGene_29906	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTGCCTTCATGATC	NA	False	NA	NA	False	NA	NA	NA	27229	19848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_19914_22613_22820_26908
ES.36525.1	chrUn_MU069435v1	-	1161	1	Intergenic	novelGene_29917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCCGGGCAGTGGTGGC	NA	False	NA	NA	False	AAAAAG	-7	NA	30823	29662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_29700_30800
ES.36525.2	chrUn_MU069435v1	-	980	1	Intergenic	novelGene_29918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30767	29787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrUn_MU069435v1_-_29800_30800
ES.36526.1	chrX	-	4208	1	Intergenic	novelGene_29919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	3428961	3424753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_3424800_3429000
ES.36527.1	chrX	-	5195	3	Antisense	novelGene_ENSMUSG00000094401.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGGTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	5174668	5024636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_5026163_5026224_5029736_5174510
ES.36528.1	chrX	-	176	1	Intergenic	novelGene_29920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTAAAAAAAGATGCCTT	NA	False	NA	NA	False	NA	NA	NA	5407213	5407037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_5407000_5407200
ES.36529.1	chrX	-	172	1	Intergenic	novelGene_29921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGGTTTCTAAGT	NA	False	NA	NA	False	NA	NA	NA	5652783	5652611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_5652600_5652800
ES.3653.1	chr10	-	260	2	ISM	ENSMUSG00000112289.2	ENSMUST00000218396.2	989	3	2215	350	2215	2	3prime_fragment	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTAGCATGTCTTGGTT	8041	False	NA	NA	False	NA	NA	NA	95556136	95555344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_95555519_95556050
ES.36530.1	chrX	-	627	1	Intergenic	novelGene_29922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCTTCTTGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	5779971	5779344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_5779300_5780000
ES.36531.1	chrX	+	2620	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	56	360	56	-360	multi-exon	FALSE	canonical	3	23	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTAGAAGTTACTTGG	NA	False	NA	13	True	NA	NA	NA	5959562	5966804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_5960459_5965080
ES.36532.1	chrX	+	3144	1	Antisense	novelGene_ENSMUSG00000073294.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTCTTGTGGTCAT	9591	False	NA	NA	False	NA	NA	NA	5994280	5997424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_5994300_5997400
ES.36533.1	chrX	-	1817	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	20	1	20	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTTTGTTGTGGTACA	NA	False	NA	0	True	AATAAA	-23	NA	5995453	5993273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_5994830_5995192
ES.36533.2	chrX	-	2207	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	-7	1	-7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTTTGTTGTGGTACA	NA	False	NA	0	True	AATAAA	-23	NA	5995480	5993273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_5993300_5995500
ES.36534.1	chrX	-	2097	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	-325	3	-325	-3	multi-exon	FALSE	canonical	3	9	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGGAGTCCTTATAA	NA	False	NA	5	True	NA	NA	NA	6085394	6080752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_6081851_6084395
ES.36535.1	chrX	-	3024	2	FSM	ENSMUSG00000023279.8	ENSMUST00000024049.8	3060	2	34	2	34	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAAAGTTAGTAATTT	NA	False	NA	NA	False	AATAAA	-21	NA	6232741	6226162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_6228541_6232095
ES.36536.1	chrX	+	8404	9	FSM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	50	-3615	50	4	multi-exon	FALSE	canonical	2	6	junction_3	2.54644359843292	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGTCTCTGATGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	6311957	6549506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
ES.36536.2	chrX	+	8199	9	NNC	ENSMUSG00000068270.16	novel	4839	9	NA	NA	160	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCGTCTCTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	6312067	6549502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_6312225_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
ES.36536.3	chrX	+	7498	8	NIC	ENSMUSG00000068270.16	novel	4839	9	NA	NA	175	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	4.02542937245868	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCGTCTCTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	6312082	6549502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6541154_6541336_6544276_6544547_6545501
ES.36536.4	chrX	+	173	1	Intergenic	novelGene_29923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	6377298	6377471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_6377300_6377500
ES.36536.5	chrX	+	8048	8	ISM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	120937	-3615	-56495	4	3prime_fragment	FALSE	canonical	2	6	junction_2	2.54750778573243	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCGTCTCTGATGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	6432844	6549506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
ES.36537.1	chrX	+	4442	7	NNC	ENSMUSG00000062393.15	novel	7849	28	NA	NA	110287	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATATCTACGTCTTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	6800696	6814601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_6800792_6801939_6802101_6802868_6803011_6804538_6804626_6807048_6807160_6809815_6809943_6810882
ES.36538.1	chrX	-	8664	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	49	-323	8	323	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCAGCCTCCCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	7054904	7019725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.10	chrX	-	5224	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	-48	2101	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	17.5557421270835	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTGTGCGAACGGATAC	3208	False	NA	NA	False	AATAAA	-16	NA	7185520	7023606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7184640_7184728_7185344
ES.36538.12	chrX	-	3121	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-6	5275	-6	384	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTGGCTTGGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	7054959	7025323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.13	chrX	-	2700	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	25	5665	-16	-6	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTTGTTCTTTAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	7054928	7025713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.14	chrX	-	2678	12	ISM	ENSMUSG00000004317.15	ENSMUST00000115746.8	3052	15	106232	8	-24287	-8	3prime_fragment	FALSE	canonical	3	26	junction_11	8.96826360373711	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTATGTTTGTTCTTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	7079240	7025715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102
ES.36538.15	chrX	-	2551	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	26	5813	-15	-154	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTGTGTTGTCTGTTT	NA	False	NA	NA	False	AAAACA	-29	NA	7054927	7025861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.16	chrX	-	2927	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	-12	-160	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	17.5557421270835	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATATTAGTGTGTTGT	3244	False	NA	NA	False	AAAACA	-23	NA	7185484	7025867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7184640_7184728_7185344
ES.36538.17	chrX	-	2955	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	9	-218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	19.5134699683086	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGATATATTTTATTAA	3140	False	NA	NA	False	TATAAA	-17	NA	7185588	7025925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7166136_7166206_7182897_7183063_7185344
ES.36538.18	chrX	-	777	4	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	11	-66085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.02768199119819	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTCCTGAGACGTGT	3142	False	NA	NA	False	AATAAA	-19	NA	7185586	7145314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7145598_7182897_7183063_7184640_7184728_7185344
ES.36538.2	chrX	-	8821	14	NIC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_12	15.0816319177261	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	3082	False	NA	0	True	AATAAA	-22	NA	7185646	7020048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7185344
ES.36538.3	chrX	-	8858	15	NNC	ENSMUSG00000004317.15	novel	3052	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	17.5557421270835	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	3132	False	NA	0	True	AATAAA	-22	NA	7185596	7020048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7079102_7079250_7182897_7183063_7184640_7184728_7185344
ES.36538.4	chrX	-	5468	2	NNC	ENSMUSG00000004317.15	novel	8390	12	NA	NA	29348	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTCTGTTTCTGAAG	NA	False	NA	-1	True	AATAAA	-21	NA	7025564	7020049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7022879_7022925
ES.36538.5	chrX	-	8382	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	7	1	7	-1	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTCTGTTTCTGAAG	NA	False	NA	-1	True	AATAAA	-21	NA	7054946	7020049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.6	chrX	-	6907	6	NNC	ENSMUSG00000004317.15	novel	8390	12	NA	NA	24426	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.0875449209005	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATTCAAGTCTGTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	7030486	7020054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7029965_7030039_7030459
ES.36538.7	chrX	-	7312	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	23	1055	-18	-1055	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGATAAAACTATATGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	7054930	7021103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36538.8	chrX	-	5378	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	-7	3019	-7	2640	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTTCCTAAGCACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	7054960	7023067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ES.36539.1	chrX	-	4766	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-209	-1317	-209	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTAACATTCTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	7242278	7237512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7237500_7242300
ES.36539.2	chrX	-	4366	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-500	-626	-500	626	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTACTTAGTGGCCAAC	NA	False	NA	NA	False	AATAAA	-27	NA	7242569	7238203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7238200_7242600
ES.36539.3	chrX	-	3724	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-484	0	-484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTATTTGGACTG	NA	False	NA	NA	False	NA	NA	NA	7242553	7238829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7238800_7242600
ES.36539.4	chrX	-	2887	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	-10	363	-10	-363	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGGCTAGCGAAAGA	NA	False	NA	NA	False	ATTAAA	-12	NA	7242079	7239192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7239200_7242100
ES.3654.1	chr10	-	159	1	Intergenic	novelGene_2794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	95568875	95568716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95568700_95568900
ES.36540.1	chrX	-	728	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15497	-6	-6658	3	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGCTTATTATTCT	NA	False	NA	-25	True	NA	NA	NA	7295885	7278338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_7278772_7290368_7290524_7295745
ES.36540.2	chrX	-	549	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	-6	-3	-6	3	multi-exon	FALSE	canonical	3	121	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGCTTATTATTCT	NA	False	NA	-25	True	NA	NA	NA	7289233	7278338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7278772_7289117
ES.36540.3	chrX	-	534	2	NNC	ENSMUSG00000063018.7	novel	874	2	NA	NA	284	3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGCTTATTATTCT	NA	False	NA	-25	True	NA	NA	NA	7288943	7278338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7278772_7288842
ES.36540.4	chrX	-	626	3	NNC	ENSMUSG00000063018.7	novel	885	4	NA	NA	-6571	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	25.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGGCTTATTATTCT	NA	False	NA	-25	True	NA	NA	NA	7295798	7278338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7278772_7290383_7290524_7295745
ES.36540.5	chrX	-	517	2	NIC	ENSMUSG00000063018.7	novel	885	4	NA	NA	-6614	-6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAAGTTACTTTGTG	NA	False	NA	-37	True	NA	NA	NA	7295841	7278350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7278772_7295745
ES.36541.1	chrX	-	176	1	Intergenic	novelGene_29924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATTAAGGGA	3682	False	NA	NA	False	NA	NA	NA	7315629	7315453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7315500_7315600
ES.36542.1	chrX	+	3528	3	FSM	ENSMUSG00000039545.17	ENSMUST00000144719.9	3467	3	-66	5	-66	-5	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCACTGACCATTTGT	10007	False	NA	NA	False	ATTAAA	-23	NA	7439772	7447261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7440149_7443926_7443964_7444146
ES.36543.1	chrX	-	4333	19	NIC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	1	26	combination_of_known_splicesites	TRUE	canonical	0	0	junction_16	95.1319583850392	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCTTTACAGCAGAACT	NA	False	NA	NA	False	AATAAA	-42	NA	7471619	7424814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7427123_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7466859_7466993_7470398_7470577_7471482
ES.36543.10	chrX	-	3794	20	NIC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	0	-621	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	82.9390190828574	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGAGCTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	7471620	7425461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7427123_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.11	chrX	-	5474	1	Genic_Genomic	ENSMUSG00000039556.17	novel	NA	NA	NA	NA	-12	-6592	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTTGAGTATTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	7440534	7435060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_7435100_7440500
ES.36543.12	chrX	-	2258	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	98	-3	98	3	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTAGGCATGGATTGGG	NA	False	NA	-6	True	AATAAA	-22	NA	7471658	7460044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.13	chrX	-	4453	13	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	129	1	intron_retention	FALSE	canonical	3	186	junction_10	26.1486137299858	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGCTTAGGCATGGATTG	NA	False	NA	-8	True	AATAAA	-20	NA	7471627	7460046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462853_7462969_7463972_7465396_7465576_7465672_7466993_7470398_7470577_7471482
ES.36543.14	chrX	-	3543	14	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	142	0	intron_retention	FALSE	canonical	3	186	junction_9	24.2428541292349	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7471614	7460047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.15	chrX	-	2941	16	NNC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	160	0	intron_retention	FALSE	canonical	1	1	junction_15	61.400832422877	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7471596	7460047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471478
ES.36543.16	chrX	-	1733	14	NNC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	-2427	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	65.4018981683534	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7465945	7460047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462975_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867
ES.36543.17	chrX	-	4605	12	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	160	0	intron_retention	FALSE	canonical	3	194	junction_7	23.8108940967354	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGCTTAGGCATGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	7471596	7460048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462853_7462969_7463972_7465396_7465740_7465867_7466993_7470398_7470577_7471482
ES.36543.18	chrX	-	2346	16	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	123	0	intron_retention	FALSE	canonical	3	186	junction_11	24.7910378071503	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGCTTAGGCATGGAT	NA	False	NA	-10	True	AATAAA	-18	NA	7471633	7460048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.19	chrX	-	4089	13	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	136	-1	intron_retention	FALSE	canonical	3	186	junction_10	24.2113093408845	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACGCTTAGGCATGGA	NA	False	NA	-11	True	AATAAA	-17	NA	7471620	7460049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7463972_7465396_7465576_7465672_7466993_7470398_7470577_7471482
ES.36543.2	chrX	-	3447	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	-22	-359	13	359	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATATATTTATTTACTT	NA	False	NA	NA	False	AATAAA	-25	NA	7440509	7424831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
ES.36543.21	chrX	-	2005	17	NNC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	137	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	60.3681414323814	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCACGCTTAGGCATGG	NA	False	NA	-12	True	AATAAA	-16	NA	7471619	7460050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463901_7465533_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.22	chrX	-	4023	13	NIC	ENSMUSG00000031143.5	novel	2353	17	NA	NA	181	-2	intron_retention	FALSE	canonical	3	194	junction_9	22.9799127258762	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCACGCTTAGGCATGG	NA	False	NA	-12	True	AATAAA	-16	NA	7471575	7460050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463972_7465396_7466993_7470398_7470577_7471482
ES.36543.3	chrX	-	4471	13	NIC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	7544	9	intron_retention	FALSE	canonical	1	3	junction_3	100.217645097502	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATATATTTATTTACTT	NA	False	NA	NA	False	AATAAA	-25	NA	7464076	7424831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7427123_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969
ES.36543.4	chrX	-	4808	19	NIC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	1	-350	intron_retention	FALSE	canonical	1	3	junction_3	85.2109401484789	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGGAGCCTGT	NA	False	NA	NA	False	AATATA	-21	NA	7471619	7425190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7427123_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ES.36543.5	chrX	-	3119	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	-54	1	-19	-1	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTCTGGGAGCCTG	NA	False	NA	NA	False	AATATA	-20	NA	7440541	7425191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
ES.36543.6	chrX	-	5035	18	NNC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	45	-352	intron_retention	FALSE	canonical	1	1	junction_17	96.3999741561222	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTGTCTGGGAGCCT	NA	False	NA	NA	False	AATATA	-19	NA	7471575	7425192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7427123_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7466993_7470398_7470577_7471478
ES.36543.7	chrX	-	4522	10	NIC	ENSMUSG00000103436.2	novel	5727	17	NA	NA	9500	-352	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	114.163625263625	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTGTCTGGGAGCCT	NA	False	NA	NA	False	AATATA	-19	NA	7462120	7425192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7428822_7430100_7430181_7430474_7430528_7460264_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943
ES.36543.8	chrX	-	7764	3	FSM	ENSMUSG00000039556.17	ENSMUST00000123090.3	486	3	-4192	-3086	-4192	78	multi-exon	FALSE	canonical	0	0	junction_1	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTTGCTGTGCTGGT	NA	False	NA	NA	False	AATAGA	-16	NA	7434719	7425382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7428822_7430100_7430181_7430474
ES.36543.9	chrX	-	2896	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	-23	193	12	77	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTGCTGTGCTGG	NA	False	NA	NA	False	AATAGA	-15	NA	7440510	7425383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
ES.36544.1	chrX	-	938	1	Intergenic	novelGene_29925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCATCTGCGTAGGGAGG	NA	False	NA	NA	False	NA	NA	NA	7502994	7502056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7502100_7503000
ES.36545.1	chrX	+	131	1	Intergenic	novelGene_29926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	7503779	7503910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7503800_7503900
ES.36546.1	chrX	+	2371	7	FSM	ENSMUSG00000031144.16	ENSMUST00000069520.11	2591	7	215	5	-36	-5	multi-exon	FALSE	canonical	0	0	junction_4	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCGTCCCGGCTCTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	7504924	7519490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7504968_7506096_7506163_7507335_7507461_7510339_7510539_7511246_7511439_7514795_7515127_7518075
ES.36546.2	chrX	+	273	2	NNC	ENSMUSG00000031144.16	novel	2591	7	NA	NA	5206	-1265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTCTGAGCCCTACCTT	NA	False	NA	NA	False	NA	NA	NA	7515353	7518230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7515472_7518075
ES.36546.3	chrX	+	1469	2	NNC	ENSMUSG00000031144.16	novel	2591	7	NA	NA	5227	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGTCCCGGCTCTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	7515374	7519491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7515428_7518075
ES.36547.1	chrX	-	1932	1	NIC	ENSMUSG00000087644.2	novel	1820	3	NA	NA	4000	-221	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7519497	7517565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7517600_7519500
ES.36548.1	chrX	+	2352	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	-59	8	-59	-3	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTATTTTTATTGTTT	NA	False	NA	89	True	AAAAAG	-23	NA	7523439	7534189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ES.36548.10	chrX	+	3159	6	FSM	ENSMUSG00000031145.16	ENSMUST00000123172.3	2487	6	-742	70	-742	-70	multi-exon	FALSE	canonical	3	70	junction_3	4.22374241638858	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAATGGTTTTGCCTCAA	NA	False	NA	22	True	AAGAAA	-18	NA	7528259	7534122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ES.36548.3	chrX	+	5018	1	NIC	ENSMUSG00000031145.16	novel	2301	9	NA	NA	90	1239	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCTAAAAAAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	7523588	7528606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7523600_7528600
ES.36548.4	chrX	+	4197	2	ISM	ENSMUSG00000031145.16	ENSMUST00000129662.3	2376	8	-1176	5804	97	1254	5prime_fragment	FALSE	canonical	3	80	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAAGCTTAGGTAAA	NA	False	NA	NA	False	NA	NA	NA	7523595	7528621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7524946_7525774
ES.36548.5	chrX	+	2434	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	106	-239	106	11	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGGAGAATACTTGC	NA	False	NA	NA	False	AATAAA	-21	NA	7523604	7534436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ES.36548.6	chrX	+	2721	8	ISM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	112	8	-100	-3	intron_retention	FALSE	canonical	3	64	junction_3	5.92814112035612	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTATTTTTATTGTTT	NA	False	NA	89	True	AAAAAG	-23	NA	7523610	7534189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510
ES.36548.8	chrX	+	2053	9	NNC	ENSMUSG00000031145.16	novel	2301	9	NA	NA	-82	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.3673017879316	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACTTAAACATTATTTT	NA	False	NA	81	True	AAAAAG	-15	NA	7523628	7534181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531270_7531373_7531465_7531653_7532510_7532811_7533350
ES.36548.9	chrX	+	3058	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	132	-889	-80	661	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCCTTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	7523630	7535086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ES.36549.1	chrX	+	316	1	Intergenic	novelGene_29927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7536065	7536381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7536100_7536400
ES.3655.1	chr10	-	172	1	Intergenic	novelGene_2795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95690101	95689929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95689900_95690100
ES.36550.1	chrX	-	1204	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	-45	-2	-45	2	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTTAACTTTTTTTGA	NA	False	NA	NA	False	AATAAA	-30	NA	7537674	7534177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
ES.36550.10	chrX	-	964	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	1238	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	958.276578029537	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATGAATAAGTTAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	7536314	7534184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7536254
ES.36550.11	chrX	-	1981	2	FSM	ENSMUSG00000031146.7	ENSMUST00000143854.2	600	2	3	-1384	3	-5	multi-exon	FALSE	canonical	3	2052	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATGAATAAGTTAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	7537549	7534184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7535998_7537381
ES.36550.12	chrX	-	1214	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	-39	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	916.885352702289	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATGAATAAGTTAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	7537668	7534184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7534746_7535165_7535280_7535653_7535750_7535841_7535998_7537381
ES.36550.2	chrX	-	1253	4	FSM	ENSMUSG00000031146.7	ENSMUST00000136155.2	1212	4	-23	-18	-5	-1	multi-exon	FALSE	canonical	3	2052	junction_3	118.4229707447	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATAAGTTAACTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	7537634	7534180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7534746_7535165_7535257_7535653_7535998_7537381
ES.36550.3	chrX	-	999	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	295	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	953.098630782775	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATAAGTTAACTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	7537257	7534181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537165
ES.36550.4	chrX	-	930	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	264	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	955.687579703744	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAAGTTAACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	7537288	7534183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537263
ES.36550.5	chrX	-	2986	2	ISM	ENSMUSG00000031146.7	ENSMUST00000136155.2	1212	4	22	-15	22	-4	intron_retention	FALSE	canonical	3	2166	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAAGTTAACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	7537589	7534183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_7534746_7535165
ES.36550.6	chrX	-	1612	3	NIC	ENSMUSG00000031146.7	novel	1212	4	NA	NA	12	-4	intron_retention	FALSE	canonical	3	2052	junction_2	57	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAAGTTAACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	7537599	7534183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7534746_7535165_7535998_7537381
ES.36550.8	chrX	-	1081	5	NNC	ENSMUSG00000031146.7	novel	1157	5	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	952.105430086395	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAAGTTAACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	7537568	7534183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7534746_7535165_7535257_7535653_7535739_7535841_7535998_7537381
ES.36551.1	chrX	-	1237	6	FSM	ENSMUSG00000031147.9	ENSMUST00000130287.2	2770	6	69	1464	69	-2	multi-exon	TRUE	canonical	0	0	junction_3	0.489897948556636	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGACTTGCTAGGTGC	NA	False	NA	NA	False	AATAAA	-13	NA	7547421	7540866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7541431_7542079_7542249_7542338_7542576_7543358_7543442_7546138_7546286_7547384
ES.36552.1	chrX	+	3606	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	-15	-12	-15	12	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTATCTCTGTAGTCACT	NA	False	NA	NA	False	NA	NA	NA	7563354	7576513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.10	chrX	+	4970	9	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	67	-213	intron_retention	FALSE	canonical	0	0	junction_5	84.8141350247705	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTAATCTTCTCAATG	NA	False	NA	NA	False	NA	NA	NA	7563436	7576288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7572389_7572570_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.12	chrX	+	911	1	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	77	-9900	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563446	7564357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7563400_7564400
ES.36552.13	chrX	+	3604	12	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	77	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	105.367597384169	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563446	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7573119_7573256_7574174_7574261_7574349
ES.36552.14	chrX	+	3284	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	81	214	81	-214	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGTAATCTTCTCAAT	NA	False	NA	NA	False	NA	NA	NA	7563450	7576287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.15	chrX	+	1819	11	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	82	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	84.0164269652072	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563451	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574206_7575938
ES.36552.16	chrX	+	3627	11	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	82	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	64.4224339807182	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCATTTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	7563451	7576500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563766_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.17	chrX	+	4167	10	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	-34	intron_retention	FALSE	canonical	0	0	junction_4	97.8378603280972	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563452	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563766_7564731_7564893_7564994_7565120_7568301_7568408_7569608_7569823_7571538_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.18	chrX	+	3717	11	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.3754111101096	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563452	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573256_7574174_7574261_7574349
ES.36552.19	chrX	+	3702	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	-34	intron_retention	FALSE	canonical	3	223	junction_8	32.8971461106009	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563452	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7573001_7574174_7574261_7574349
ES.36552.2	chrX	+	5247	9	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	223	junction_7	20.0838087772215	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCATTTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	7563375	7576500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.21	chrX	+	2940	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	402	intron_retention	FALSE	canonical	3	223	junction_8	19.0580659182198	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGAGTTTGGATCTTG	NA	False	NA	NA	False	AATAGA	-27	NA	7563452	7574848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.22	chrX	+	3540	9	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	424	intron_retention	FALSE	canonical	3	223	junction_7	20.0838087772215	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTCAAAGGCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	7563452	7574870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.24	chrX	+	3393	11	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	92	-34	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	84.4289050029668	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563461	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571612_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.25	chrX	+	2680	1	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	-1394	-3228	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAGATAACGAATATTT	1794	False	NA	NA	False	NA	NA	NA	7568349	7571029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7568300_7571000
ES.36552.3	chrX	+	1918	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	27	1634	27	421	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTCTTCAAAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	7563396	7574867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.4	chrX	+	5269	9	NNC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	47	-34	intron_retention	FALSE	canonical	0	0	junction_5	93.7262469909043	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563416	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7569823_7571538_7572389_7572570_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.7	chrX	+	4056	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	67	-34	intron_retention	FALSE	canonical	3	223	junction_8	33.549300373563	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7563436	7576467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.8	chrX	+	4608	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	67	-1	intron_retention	FALSE	canonical	3	223	junction_8	19.0580659182198	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCATTTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	7563436	7576500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36552.9	chrX	+	1708	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	67	1804	67	251	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCATTTCTTAGCCTC	NA	False	NA	NA	False	NA	NA	NA	7563436	7574697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ES.36553.1	chrX	-	191	1	Intergenic	novelGene_29928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTAGTTTATTAGGGAC	5408	False	NA	NA	False	NA	NA	NA	7568870	7568679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7568700_7568900
ES.36554.1	chrX	+	226	1	Intergenic	novelGene_29929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGTCTACTTATCCAAG	68	False	NA	NA	False	NA	NA	NA	7577576	7577802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7577600_7577800
ES.36555.1	chrX	+	1636	1	Intergenic	novelGene_29930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGGAGAGATAGCTCA	429	False	NA	NA	False	NA	NA	NA	7580933	7582569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7580900_7582600
ES.36556.1	chrX	+	3276	10	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	6	junction_1	82.8586480432523	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	3763	False	NA	16	True	AATAAA	-29	NA	7588212	7594439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.10	chrX	+	1530	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	-2	9	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	63.2250741399328	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGACCTCAAGGGTG	4009	False	NA	7	True	AATAAA	-20	NA	7588458	7594430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.11	chrX	+	1549	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	-22	-17	1	-2	multi-exon	FALSE	canonical	3	15	junction_8	67.1240642392875	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAAGGGTGGGGCGTGC	4017	False	NA	15	True	AATAAA	-28	NA	7588466	7594438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
ES.36556.12	chrX	+	1355	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	-21	176	0	1	multi-exon	FALSE	canonical	3	15	junction_8	67.1240642392875	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTTTGTGACTGGAG	4018	False	NA	14	True	AATAAA	-16	NA	7588467	7594245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
ES.36556.13	chrX	+	3421	8	NIC	ENSMUSG00000039382.13	novel	1510	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	15	junction_6	73.3050656712156	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAAGGGTGGGGCGT	4018	False	NA	13	True	AATAAA	-26	NA	7588467	7594436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593450_7593732_7593988
ES.36556.15	chrX	+	1477	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	9	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	64.5585780512551	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTGACCTCAAGGGTG	4021	False	NA	7	True	AATAAA	-20	NA	7588470	7594430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.16	chrX	+	3578	10	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_1	81.924084099583	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	4021	False	NA	17	True	AATAAA	-30	NA	7588470	7594440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.17	chrX	+	1813	13	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	85.4908620847866	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4022	False	NA	3	True	AATAAA	-16	NA	7588471	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7589553_7589604_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.18	chrX	+	1793	8	NIC	ENSMUSG00000039382.13	novel	1568	11	NA	NA	-4	5	intron_retention	FALSE	canonical	2	6	junction_4	90.4092734994253	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4025	False	NA	3	True	AATAAA	-16	NA	7588474	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592436_7592532_7592924_7593005_7593116_7593326_7593408
ES.36556.19	chrX	+	1565	12	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	75.0007162500234	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTTTTGTGACTGGA	4038	False	NA	13	True	AATAAA	-15	NA	7588487	7594244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.2	chrX	+	3921	10	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	4	5	intron_retention	FALSE	canonical	2	3	junction_1	82.8149804543497	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	3766	False	NA	3	True	AATAAA	-16	NA	7588215	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588470_7589553_7589993_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.20	chrX	+	3680	7	NIC	ENSMUSG00000039382.13	novel	1335	9	NA	NA	0	1	intron_retention	FALSE	canonical	3	94	junction_1	47.0416482137549	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCACTTTTTGTGACTGG	4038	False	NA	12	True	AATAAA	-14	NA	7588487	7594243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.21	chrX	+	3358	9	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	5	intron_retention	FALSE	canonical	3	94	junction_1	45.2021501147899	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4038	False	NA	3	True	AATAAA	-16	NA	7588487	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.22	chrX	+	1375	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	34	200	1	1	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTTTGTGACTGGAG	4040	False	NA	14	True	AATAAA	-16	NA	7588489	7594245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.23	chrX	+	1686	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	82.1800462399481	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4040	False	NA	3	True	AATAAA	-16	NA	7588489	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7591978_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.25	chrX	+	3296	9	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	1	5	intron_retention	FALSE	non_canonical	0	0	junction_1	88.8164364011527	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4040	False	NA	3	True	AATAAA	-16	NA	7588489	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588619_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.26	chrX	+	1453	11	NNC	ENSMUSG00000039382.13	novel	1510	11	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_8	79.1719647349995	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4040	False	NA	3	True	AATAAA	-16	NA	7588489	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7594049
ES.36556.27	chrX	+	1568	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	34	7	1	-2	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAAGGGTGGGGCGTGC	4040	False	NA	15	True	AATAAA	-28	NA	7588489	7594438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.28	chrX	+	3679	7	NIC	ENSMUSG00000109493.2	novel	1153	8	NA	NA	15	-2254	intron_retention	FALSE	canonical	3	94	junction_1	47.7275252518572	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4049	False	NA	3	True	AATAAA	-16	NA	7588498	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7592532_7592924_7593005_7593116_7593326_7593408
ES.36556.29	chrX	+	3668	8	NNC	ENSMUSG00000039382.13	novel	1335	9	NA	NA	-1	6	intron_retention	FALSE	canonical	3	37	junction_7	71.0969444505464	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4061	False	NA	4	True	AATAAA	-17	NA	7588510	7594427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.3	chrX	+	2157	12	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	-6	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	76.4454107611849	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	3776	False	NA	3	True	AATAAA	-16	NA	7588225	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588516_7589553_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.30	chrX	+	3450	9	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	-9	3	intron_retention	FALSE	canonical	3	37	junction_8	67.0054801863251	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	4115	False	NA	1	True	AATAAA	-14	NA	7588564	7594424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7592276_7592436_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.31	chrX	+	1488	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115687.8	1299	11	-5	-184	-5	5	multi-exon	FALSE	canonical	1	1	junction_1	65.9799969687784	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4711	False	NA	3	True	AATAAA	-16	NA	7589160	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7589221_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.32	chrX	+	1552	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	123	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.4240490665804	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAAGGGTGGGGCGTGC	4839	False	NA	15	True	AATAAA	-28	NA	7589288	7594438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589401_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.33	chrX	+	1637	12	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	154	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	85.699069881256	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4870	False	NA	3	True	AATAAA	-16	NA	7589319	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589401_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.34	chrX	+	1438	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	156	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	86.6988465897903	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	4872	False	NA	1	True	AATAAA	-14	NA	7589321	7594424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589401_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594051
ES.36556.35	chrX	+	3826	9	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	206	5	intron_retention	TRUE	non_canonical	0	0	junction_1	81.7311713791011	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	4922	False	NA	3	True	AATAAA	-16	NA	7589371	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589480_7589528_7589993_7590087_7590160_7590262_7590338_7590425_7592276_7592436_7592532_7592924_7593326_7593408_7593732_7593988
ES.36556.36	chrX	+	1334	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	254	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	66.2646964831199	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGTGACTGGAGTGC	4970	False	NA	17	True	AATAAA	-19	NA	7589419	7594248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589498_7590081_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.37	chrX	+	1955	10	ISM	ENSMUSG00000039382.13	ENSMUST00000115687.8	1299	11	405	-194	-213	-4	3prime_fragment	FALSE	canonical	3	181	junction_9	21.9747329651327	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAAGGGTGGGGCGT	5121	False	NA	13	True	AATAAA	-26	NA	7589570	7594436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.38	chrX	+	1337	11	NNC	ENSMUSG00000039382.13	novel	955	8	NA	NA	-100	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	65.4110082478477	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTTTGTGACTGGAG	5234	False	NA	14	True	AATAAA	-16	NA	7589683	7594245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7589774_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.4	chrX	+	3517	12	Fusion	ENSMUSG00000039382.13_ENSMUSG00000031149.8	novel	1609	11	NA	NA	-5	-1	intron_retention	FALSE	canonical	2	6	junction_1	256.521936941524	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCCTCCTGTGTGAA	3777	False	NA	6	True	AATAAA	-19	NA	7588226	7597302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7595002_7595954_7596173_7596506
ES.36556.40	chrX	+	1500	10	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	169	3	intron_retention	FALSE	canonical	3	37	junction_9	58.7215652228568	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	5503	False	NA	1	True	AATAAA	-14	NA	7589952	7594424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.41	chrX	+	1200	10	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	291	2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_9	58.7215652228568	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTGTGACTGGAGT	5625	False	NA	15	True	AATAAA	-17	NA	7590074	7594246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
ES.36556.42	chrX	+	1047	2	NIC	ENSMUSG00000031149.8	novel	1339	3	NA	NA	68	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTAGTTTGGCCTCCTGT	1238	False	NA	1	True	AATAAA	-14	NA	7594745	7597297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7595002_7596506
ES.36556.43	chrX	+	1004	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	117	552	117	-552	intron_retention	FALSE	canonical	3	906	junction_1	0	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGACACCTGTGATT	1287	False	NA	NA	False	ATTAAA	-30	NA	7594794	7596751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7595002_7595954
ES.36556.44	chrX	+	1548	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	124	1	124	-1	intron_retention	FALSE	canonical	3	906	junction_1	0	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCCTCCTGTGTGAA	1294	False	NA	6	True	AATAAA	-19	NA	7594801	7597302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7595002_7595954
ES.36556.45	chrX	+	1831	3	NNC	ENSMUSG00000031149.8	novel	1339	3	NA	NA	350	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	376	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTAGTTTGGCCTCCT	1520	False	NA	-1	True	AATAAA	-12	NA	7595027	7597295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7595852_7595954_7596173_7596506
ES.36556.46	chrX	+	1717	2	ISM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	569	6	569	-6	3prime_fragment	FALSE	canonical	3	755	junction_1	0	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTAGTTTGGCCTCCTGT	1739	False	NA	1	True	AATAAA	-14	NA	7595246	7597297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7596173_7596506
ES.36556.5	chrX	+	1663	11	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	64.5585780512551	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	3785	False	NA	3	True	AATAAA	-16	NA	7588234	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.6	chrX	+	1556	10	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	4	5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	88.4183378555365	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACTTGACCTCAAG	3786	False	NA	3	True	AATAAA	-16	NA	7588235	7594426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ES.36556.7	chrX	+	1390	8	NNC	ENSMUSG00000039382.13	novel	1007	10	NA	NA	64	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.688399595258	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATGACTTGACCTCA	3846	False	NA	1	True	AATAAA	-14	NA	7588295	7594424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7588470_7590087_7590160_7590262_7590338_7590425_7590531_7592726_7593005_7593116_7593326_7593408_7593511_7594049
ES.36556.8	chrX	+	4250	5	NIC	ENSMUSG00000109493.2	novel	1153	8	NA	NA	-182	-2241	intron_retention	FALSE	canonical	3	6	junction_1	89.0575656527844	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGGGTGGGGCGTGCT	3852	False	NA	16	True	AATAAA	-29	NA	7588301	7594439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7593326_7593450
ES.36556.9	chrX	+	3240	9	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	6	intron_retention	FALSE	canonical	3	6	junction_1	70.6690128344807	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGACTTGACCTCAAGG	4006	False	NA	4	True	AATAAA	-17	NA	7588455	7594427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7588516_7590087_7590160_7590262_7590338_7590425_7592276_7592436_7592532_7592924_7593326_7593408_7593511_7593585_7593732_7593988
ES.36557.1	chrX	-	2905	1	Antisense	novelGene_ENSMUSG00000109493.2_AS_novelGene_ENSMUSG00000039382.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTAAGGTTTC	3052	False	NA	NA	False	NA	NA	NA	7592394	7589489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_7589500_7592400
ES.36558.1	chrX	+	177	1	Intergenic	novelGene_29932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGGAGAGAGCAGGGACT	5158	False	NA	NA	False	NA	NA	NA	7612275	7612452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7612300_7612500
ES.36559.1	chrX	+	383	1	Intergenic	novelGene_29933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGAAAAAGTCCCTAT	8203	False	NA	NA	False	NA	NA	NA	7615320	7615703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7615300_7615700
ES.3656.1	chr10	+	3541	2	NIC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-2041	107	intron_retention	FALSE	canonical	3	133	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCAGTTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	95727263	95733226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95730152_95732573
ES.3656.10	chr10	+	1067	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	113	327	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGCAGCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	95729417	95733446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729523_95730062_95730152_95732573
ES.3656.11	chr10	+	847	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	113	107	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCAGTTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	95729417	95733226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729523_95730062_95730152_95732573
ES.3656.12	chr10	+	174	1	Intergenic	novelGene_2796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTTCGTAGCA	1326	False	NA	NA	False	NA	NA	NA	95731661	95731835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_95731700_95731800
ES.3656.2	chr10	+	1666	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-933	107	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	63.5	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGCAGTTTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	95728371	95733226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729296_95730062_95730152_95732573
ES.3656.3	chr10	+	1761	4	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-283	620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.0987873536054	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTCAGAATATCATTC	NA	False	NA	27	True	AATAAA	-20	NA	95729021	95733739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729296_95729415_95729523_95729937_95730152_95732573
ES.3656.4	chr10	+	1705	4	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-261	617	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	55.1603722491669	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGAAACTCAGAATATCA	NA	False	NA	24	True	AATAAA	-17	NA	95729043	95733736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729296_95729415_95729523_95729968_95730152_95732573
ES.3656.5	chr10	+	1494	4	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	-144	617	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	55.4035698809703	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGAAACTCAGAATATCA	NA	False	NA	24	True	AATAAA	-17	NA	95729160	95733736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729296_95729415_95729523_95730062_95730152_95732573
ES.3656.6	chr10	+	1544	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	22	619	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAACTCAGAATATCATT	NA	False	NA	26	True	AATAAA	-19	NA	95729326	95733738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729523_95729968_95730152_95732573
ES.3656.7	chr10	+	1235	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	24	312	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTCTGGCAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	95729328	95733431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729523_95729968_95730152_95732573
ES.3656.8	chr10	+	1416	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	57	620	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	59.5	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTCAGAATATCATTC	NA	False	NA	27	True	AATAAA	-20	NA	95729361	95733739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729523_95730062_95730152_95732573
ES.3656.9	chr10	+	1439	3	NNC	ENSMUSG00000112400.2	novel	858	3	NA	NA	59	617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.5	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGAAACTCAGAATATCA	NA	False	NA	24	True	AATAAA	-17	NA	95729363	95733736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95729541_95730052_95730152_95732573
ES.36560.1	chrX	-	3906	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-183	4	intron_retention	TRUE	canonical	0	0	junction_10	13.1057239403247	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCTGTCTGTTTC	NA	False	NA	0	True	AATAAA	-18	NA	7607763	7597948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606587_7606649_7607450
ES.36560.10	chrX	-	3871	10	NNC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	1	junction_6	12.1207912384841	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGATTGAGTCTCTGT	NA	False	NA	-7	True	AATAAA	-11	NA	7617145	7597955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604095_7604267_7604400_7604492_7604608_7604763_7616836
ES.36560.11	chrX	-	5393	6	NNC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	670	-3	intron_retention	FALSE	canonical	0	0	junction_5	15.3492670834799	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGATTGAGTCTCTGT	NA	False	NA	-7	True	AATAAA	-11	NA	7605776	7597955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7604492_7604608_7604763_7605672
ES.36560.12	chrX	-	3389	11	NNC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1354165131417	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGATTGAGTCTCTG	NA	False	NA	-8	True	AATAAA	-10	NA	7617127	7597956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7598973_7599422_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603703_7604132_7604267_7604400_7604492_7604608_7604763_7616836
ES.36560.13	chrX	-	3493	9	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_1	12.854352375752	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGATTGAGTCTCTG	NA	False	NA	-8	True	AATAAA	-10	NA	7606449	7597956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606381
ES.36560.14	chrX	-	3380	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11.7936423550996	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGATTGAGTCTCTG	NA	False	NA	-8	True	AATAAA	-10	NA	7617142	7597956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7598973_7599422_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
ES.36560.15	chrX	-	4806	8	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	16	junction_7	9.14062472745508	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTTGATTGAGTCTCTG	NA	False	NA	-8	True	AATAAA	-10	NA	7617146	7597956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7603217_7603537_7603679_7604132_7604267_7604400_7604763_7616836
ES.36560.17	chrX	-	3697	10	NNC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	1179	-5	intron_retention	FALSE	canonical	0	0	junction_9	14.4845596804253	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTTGATTGAGTCTCT	121	False	NA	-9	True	AATAAA	-9	NA	7605267	7597957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604600_7604763_7605101
ES.36560.18	chrX	-	128	1	Intergenic	novelGene_29931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACAGCCCCAAA	111	False	NA	NA	False	NA	NA	NA	7605277	7605149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7605100_7605300
ES.36560.19	chrX	-	4550	1	NIC	ENSMUSG00000031150.14	novel	372	2	NA	NA	7	-7828	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATGAAAAGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	7617129	7612579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7612600_7617100
ES.36560.2	chrX	-	3659	10	NNC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	645	2	intron_retention	FALSE	canonical	0	0	junction_9	11.9350091933121	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGTCTCTGTCTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	7605801	7597950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7605672
ES.36560.3	chrX	-	3931	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-61	0	intron_retention	FALSE	canonical	1	1	junction_8	12.1563883525403	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7617205	7597952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604518_7604600_7604763_7616836
ES.36560.4	chrX	-	3898	11	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-1	0	intron_retention	FALSE	canonical	1	2	junction_10	12.7357763799464	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7617145	7597952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7606587_7606649_7616836
ES.36560.5	chrX	-	3616	10	FSM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	42	0	9	0	multi-exon	FALSE	canonical	2	2	junction_9	11.4385097881166	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7607538	7597952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7607450
ES.36560.6	chrX	-	4931	8	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_7	6.77932029583124	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7617136	7597952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
ES.36560.7	chrX	-	3868	10	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-32	0	intron_retention	FALSE	canonical	3	16	junction_9	8.46926177784867	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7617176	7597952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
ES.36560.9	chrX	-	3823	9	NIC	ENSMUSG00000031150.14	novel	3658	10	NA	NA	-88	-2	intron_retention	FALSE	canonical	0	0	junction_1	10.5704481929576	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTGAGTCTCTGTC	NA	False	NA	-6	True	AATAAA	-12	NA	7617232	7597954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7600338_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7616836
ES.36561.1	chrX	-	182	1	Intergenic	novelGene_29934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	7623792	7623610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7623600_7623800
ES.36562.1	chrX	-	191	1	Intergenic	novelGene_29935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	7625395	7625204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7625200_7625400
ES.36563.1	chrX	-	152	1	Intergenic	novelGene_29936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7627664	7627512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7627500_7627700
ES.36564.1	chrX	+	3130	11	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	92.8918188001505	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628783	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7628870_7629128_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.10	chrX	+	2889	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	116.938730396164	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCATTGAGTCTCC	NA	False	NA	15	True	AATAAA	-26	NA	7628825	7641431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7628870_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.11	chrX	+	3329	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	-89	-1	1	0	multi-exon	FALSE	canonical	3	33	junction_2	88.3978101510788	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628825	7641441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.12	chrX	+	4240	9	ISM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	-69	3	3	0	intron_retention	FALSE	canonical	3	227	junction_1	32.0848484490733	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628827	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687
ES.36564.13	chrX	+	3150	11	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.7477466395859	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628828	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7628870_7629061_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.14	chrX	+	3210	11	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.7477466395859	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628833	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633738_7633864_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.15	chrX	+	3201	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115680.11	3103	10	-101	3	2	0	multi-exon	FALSE	canonical	1	3	junction_2	97.3049172117229	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628904	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7629300_7631745_7631860_7632858_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.16	chrX	+	3178	10	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	93.1241041053931	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628905	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639821
ES.36564.18	chrX	+	2785	9	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	102.007888788074	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628915	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7640054
ES.36564.2	chrX	+	4757	9	NIC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	227	junction_1	31.5612004682965	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628793	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7638836_7639732
ES.36564.21	chrX	+	4760	8	NIC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	227	junction_1	34.1192386928488	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628927	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7629300_7631745_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.22	chrX	+	3178	9	NIC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	98.5646995632818	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCATTGAGTCTCCCG	NA	False	NA	17	True	AATAAA	-28	NA	7628930	7641433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637233_7637310_7638687_7638836_7639732
ES.36564.23	chrX	+	4822	8	NIC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	227	junction_1	32.8670792429018	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628937	7641441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7634237_7635668_7635787_7637012_7637070_7637233_7638836_7639732
ES.36564.24	chrX	+	3381	10	FSM	ENSMUSG00000000134.18	ENSMUST00000137467.8	3390	10	7	2	5	0	multi-exon	FALSE	canonical	2	7	junction_1	95.6201332175563	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7628940	7641436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7629453_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.25	chrX	+	3213	10	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.6294975034233	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628951	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633683_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.26	chrX	+	3249	11	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	21	35925	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	93.747746639586	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTTATAGTCTTTTTT	NA	False	NA	NA	False	AAAACA	-12	NA	7628956	7677366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732_7641438_7677330
ES.36564.27	chrX	+	4443	9	NNC	ENSMUSG00000000134.18	novel	4717	8	NA	NA	147	0	intron_retention	TRUE	non_canonical	0	0	junction_3	103.513208698214	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7629152	7641436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7629300_7631745_7631860_7632793_7633137_7633189_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687
ES.36564.28	chrX	+	2977	10	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	87.2919042249043	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7630134	7641441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.29	chrX	+	3492	9	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	34	junction_1	92.5239833772844	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7630199	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7630238_7631745_7631860_7632793_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.3	chrX	+	2950	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628793	7641441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.30	chrX	+	3805	9	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	2	1	intron_retention	FALSE	canonical	3	34	junction_1	91.8959159865116	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGAGTCTCCCGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	7630199	7641437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687
ES.36564.31	chrX	+	5196	7	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	34	junction_1	99.323405544156	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7630199	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7637310_7638687
ES.36564.32	chrX	+	2910	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	33	0	33	0	multi-exon	FALSE	canonical	3	13	junction_1	93.7669820010234	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7630230	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.33	chrX	+	3026	10	NNC	ENSMUSG00000000134.18	novel	2989	10	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.783711941139	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7630238	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7630394_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.34	chrX	+	2994	10	NIC	ENSMUSG00000000134.18	novel	2989	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	121.434939142096	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7630255	7641436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7630400_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.35	chrX	+	2983	10	FSM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	1	5	1	-5	multi-exon	FALSE	canonical	2	4	junction_1	96.5471803041982	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCATTGAGTCTCC	NA	False	NA	15	True	AATAAA	-26	NA	7630280	7641431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7630400_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.36	chrX	+	3136	10	NNC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	105	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	97.1653802087508	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	23	True	AATAAA	-34	NA	7630430	7641439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7630695_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.37	chrX	+	2970	10	NNC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	175	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	96.238130581271	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGGCATTGAGTCTC	NA	False	NA	14	True	AATAAA	-25	NA	7630500	7641430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7630608_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.38	chrX	+	2947	10	NNC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	615	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	96.8562636202178	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGAGTCTCCCGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	7631505	7641437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7631583_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.39	chrX	+	6704	5	ISM	ENSMUSG00000000134.18	ENSMUST00000126694.2	6328	7	685	0	685	0	intron_retention	FALSE	canonical	3	276	junction_4	14.396180048888	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7631575	7641436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668
ES.36564.4	chrX	+	3380	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	-103	0	-5	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628793	7641441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.40	chrX	+	2935	9	ISM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	1404	-4	793	0	3prime_fragment	FALSE	canonical	3	276	junction_4	18.5569225627527	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7631683	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.41	chrX	+	3788	8	NNC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	856	0	intron_retention	FALSE	canonical	0	0	junction_3	108.451061096982	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7631746	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7631860_7632793_7633095_7633677_7633924_7634112_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687
ES.36564.42	chrX	+	3372	8	ISM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	1900	-3	1289	-1	3prime_fragment	FALSE	canonical	3	276	junction_3	19.6281763320602	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	False	NA	23	True	AATAAA	-34	NA	7632179	7641439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.43	chrX	+	3593	22	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	-28	0	intron_retention	FALSE	canonical	2	9	junction_3	16.2201408909276	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3231	False	NA	7	True	NA	NA	NA	7656204	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.44	chrX	+	4249	21	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_3	15.9351027608861	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3259	False	NA	11	True	NA	NA	NA	7656232	7686806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534
ES.36564.45	chrX	+	1495	14	NNC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	0	-6071	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	25.7895442324206	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTTTGTCTCATTTGG	3259	False	NA	NA	False	NA	NA	NA	7656232	7670983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658466_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598
ES.36564.46	chrX	+	4380	23	ISM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	229	4	0	0	intron_retention	FALSE	canonical	3	50	junction_7	9.60543923045257	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3259	False	NA	7	True	NA	NA	NA	7656232	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534
ES.36564.47	chrX	+	3699	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	-1	intron_retention	FALSE	canonical	2	42	junction_23	10.5842555254659	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTCTGGTCTCATTC	3259	False	NA	6	True	NA	NA	NA	7656232	7686801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.48	chrX	+	3729	24	NNC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	16.9285164496817	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTGGTCTCATT	3259	False	NA	5	True	NA	NA	NA	7656232	7686800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661199_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.49	chrX	+	3015	26	FSM	ENSMUSG00000031153.17	ENSMUST00000115675.9	3015	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	17.6906755099968	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3260	False	NA	7	True	NA	NA	NA	7656233	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.5	chrX	+	2303	11	NNC	ENSMUSG00000000134.18	novel	3239	10	NA	NA	-3	-859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.130099457462	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCCACCCCTGGAG	NA	False	NA	NA	False	AAGAAA	-6	NA	7628795	7640577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7628870_7629061_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.50	chrX	+	2585	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	231	340	1	271	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGGCTGGTGTTGGTG	3261	False	NA	NA	False	ATTAAA	-15	NA	7656234	7686466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.51	chrX	+	3576	23	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	-2	intron_retention	FALSE	canonical	2	10	junction_6	15.6485813789479	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTGGTCTCATT	3261	False	NA	5	True	NA	NA	NA	7656234	7686800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.52	chrX	+	2875	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	15.333223746903	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGTCTCATTCTTT	3261	False	NA	9	True	NA	NA	NA	7656234	7686804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.53	chrX	+	4402	23	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	-1	intron_retention	FALSE	canonical	2	42	junction_22	10.7180237477742	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTCTGGTCTCATTC	3261	False	NA	6	True	NA	NA	NA	7656234	7686801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.54	chrX	+	2923	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	231	2	1	2	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGTCTCATTCTTT	3261	False	NA	9	True	NA	NA	NA	7656234	7686804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.55	chrX	+	3756	24	NNC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	2	junction_6	15.9767079990752	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3261	False	NA	7	True	NA	NA	NA	7656234	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665726_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.56	chrX	+	5225	21	NIC	ENSMUSG00000031153.17	novel	2972	24	NA	NA	1	-4	intron_retention	FALSE	canonical	3	50	junction_6	9.8737024463977	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGACTGTCTGGTCTCA	3261	False	NA	3	True	NA	NA	NA	7656234	7686798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265
ES.36564.57	chrX	+	2790	23	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	16.0309617782961	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3261	False	NA	11	True	NA	NA	NA	7656234	7686806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.58	chrX	+	3794	25	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	2	0	intron_retention	FALSE	canonical	2	9	junction_12	17.9534506123165	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3262	False	NA	11	True	NA	NA	NA	7656235	7686806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.59	chrX	+	2924	25	NNC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	16.720693682447	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3264	False	NA	7	True	NA	NA	NA	7656237	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670740_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.6	chrX	+	3252	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	-87	-2	-9	0	multi-exon	FALSE	canonical	3	29	junction_4	94.1407689314252	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628815	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.60	chrX	+	3353	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	273	intron_retention	FALSE	canonical	2	42	junction_23	10.5842555254659	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTGGTGTTGGTGAC	3272	False	NA	NA	False	ATTAAA	-17	NA	7656245	7686468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.61	chrX	+	2524	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	270	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	15.333223746903	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTGGCTGGTGTTGGT	3273	False	NA	NA	False	ATTAAA	-14	NA	7656246	7686465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.62	chrX	+	2861	24	FSM	ENSMUSG00000031153.17	ENSMUST00000101694.10	2867	24	0	6	0	-6	multi-exon	FALSE	canonical	2	9	junction_3	21.1150418078725	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGACTGTCTGGTCT	3273	False	NA	1	True	NA	NA	NA	7656246	7686796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.63	chrX	+	3617	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	0	intron_retention	FALSE	canonical	2	42	junction_23	10.8740860163911	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3274	False	NA	11	True	NA	NA	NA	7656247	7686806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.64	chrX	+	3827	23	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	42	junction_22	10.769945939381	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3274	False	NA	7	True	NA	NA	NA	7656247	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.65	chrX	+	2437	16	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_11	21.3412485316321	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAAAGA	3274	False	NA	NA	False	NA	NA	NA	7656247	7677087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846
ES.36564.66	chrX	+	3513	23	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_12	17.2598636310367	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGACTGTCTGGTCTCA	3274	False	NA	3	True	NA	NA	NA	7656247	7686798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.67	chrX	+	3638	23	NNC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_9	24.6379150803012	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTGGTCTCATT	3275	False	NA	5	True	NA	NA	NA	7656248	7686800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669563_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.68	chrX	+	2779	22	NNC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.371979657414	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTGGTCTCATT	3278	False	NA	5	True	NA	NA	NA	7656251	7686800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685345_7685561_7686240
ES.36564.69	chrX	+	4438	23	NNC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	2	junction_5	16.3198910221609	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGACTGTCTGGTCTCAT	3281	False	NA	4	True	NA	NA	NA	7656254	7686799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665726_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.7	chrX	+	3138	11	NNC	ENSMUSG00000000134.18	novel	3239	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.130099457462	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	False	NA	20	True	AATAAA	-31	NA	7628819	7641436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7628870_7629061_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.70	chrX	+	2961	25	NNC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	16.5948452505255	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3281	False	NA	7	True	NA	NA	NA	7656254	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685345_7685561_7686240
ES.36564.71	chrX	+	5155	23	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	3	0	intron_retention	FALSE	canonical	3	9	junction_11	18.2948757672427	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3286	False	NA	11	True	NA	NA	NA	7656259	7686806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534
ES.36564.72	chrX	+	2756	22	NNC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	22.2331492409435	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGACTGTCTGGTCTCA	3287	False	NA	3	True	NA	NA	NA	7656260	7686798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658466_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.73	chrX	+	2423	23	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	5	271	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	16.0309617782961	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGGCTGGTGTTGGTG	3288	False	NA	NA	False	ATTAAA	-15	NA	7656261	7686466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.74	chrX	+	3682	22	NNC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	6	273	intron_retention	FALSE	canonical	2	2	junction_6	16.6060120796117	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTGGTGTTGGTGAC	3289	False	NA	NA	False	ATTAAA	-17	NA	7656262	7686468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665726_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7685561_7686240
ES.36564.75	chrX	+	3622	23	NIC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	6	0	intron_retention	FALSE	canonical	2	10	junction_7	15.4799256837219	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3289	False	NA	7	True	NA	NA	NA	7656262	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.76	chrX	+	3694	25	NNC	ENSMUSG00000031153.17	novel	3015	26	NA	NA	24	2	intron_retention	FALSE	non_canonical	0	0	junction_5	21.0138429903295	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGTCTCATTCTTT	3307	False	NA	9	True	NA	NA	NA	7656280	7686804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7661339_7665528_7665687_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.77	chrX	+	4145	20	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	28	0	intron_retention	FALSE	canonical	3	9	junction_3	20.0631965537817	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3311	False	NA	7	True	NA	NA	NA	7656284	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534
ES.36564.78	chrX	+	3465	21	NIC	ENSMUSG00000031153.17	novel	2867	24	NA	NA	28	0	intron_retention	FALSE	canonical	2	9	junction_3	20.0031872460366	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3311	False	NA	7	True	NA	NA	NA	7656284	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
ES.36564.79	chrX	+	3029	25	NNC	ENSMUSG00000031153.17	novel	2252	9	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.1468951263771	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3340	False	NA	7	True	NA	NA	NA	7656313	7686802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7656495_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ES.36564.8	chrX	+	3072	11	NNC	ENSMUSG00000000134.18	novel	3239	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	115.509350270876	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628822	7641440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7628870_7629128_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ES.36564.80	chrX	+	3428	10	NNC	ENSMUSG00000031153.17	novel	2252	9	NA	NA	-1751	18	intron_retention	FALSE	non_canonical	0	0	junction_1	32.554607494728	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAGAAAGAAAAAAAA	4626	False	NA	NA	False	NA	NA	NA	7662934	7677105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7663360_7663906_7665668_7666395_7666581_7666772_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676491
ES.36564.9	chrX	+	3082	9	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	25	junction_1	94.3954448053506	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628822	7641438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637310_7638687_7638836_7639732
ES.36565.1	chrX	-	179	1	Intergenic	novelGene_29937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAAAAAGTGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	7681770	7681591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7681600_7681800
ES.36566.1	chrX	+	4843	7	NIC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-348	-582	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.11890797254573	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGACTCTGTGGATTG	NA	False	NA	NA	False	AATAAA	-29	NA	7688179	7703937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7688630_7688839_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
ES.36566.2	chrX	+	4724	6	FSM	ENSMUSG00000009731.5	ENSMUST00000009875.5	5287	6	-20	583	-20	-583	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGACTCTGTGGATT	NA	False	NA	NA	False	AATAAA	-28	NA	7688507	7703936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
ES.36566.3	chrX	+	4617	8	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-13	-584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.2503968183984	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACTGACTCTGTGGAT	NA	False	NA	NA	False	AATAAA	-27	NA	7688514	7703935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7688630_7688839_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7701719_7701831_7702504
ES.36566.4	chrX	+	4824	7	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	-11	-585	intron_retention	FALSE	canonical	0	0	junction_5	11.1417632755722	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTACTGACTCTGTGGA	NA	False	NA	NA	False	AATAAA	-26	NA	7688516	7703934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7701719_7701831_7702504
ES.36566.5	chrX	+	3311	8	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	1	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.5694978931965	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCATCTACTGACTCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	7688528	7703931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7688630_7689987_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698471_7698583_7701719_7701831_7702504
ES.36566.6	chrX	+	3883	7	NNC	ENSMUSG00000009731.5	novel	5287	6	NA	NA	589	-586	intron_retention	FALSE	canonical	0	0	junction_1	11.1055541659718	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTACTGACTCTGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	7689134	7703933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7689274_7689987_7691203_7697410_7697574_7697670_7697755_7697840_7698583_7701719_7701831_7702504
ES.36567.1	chrX	+	2916	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-27	15	intron_retention	FALSE	canonical	3	18	junction_1	143.100931314963	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7707575	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.10	chrX	+	3308	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-7	2	intron_retention	FALSE	canonical	3	18	junction_1	143.100931314963	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAACTCTATTCTGTGT	NA	False	NA	7	True	AATAAA	-19	NA	7707595	7741526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.11	chrX	+	2982	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	-496	-15	-4	15	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7707598	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
ES.36567.12	chrX	+	3041	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	377	junction_7	42.6404043324246	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7707601	7741095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7740193_7740471
ES.36567.13	chrX	+	3260	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-718	1	0	-1	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	False	NA	9	True	AATAAA	-21	NA	7707602	7741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.14	chrX	+	4820	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	1	2	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTTGTTTGTGTGTGT	NA	False	NA	18	True	AATAAA	-27	NA	7707603	7742861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.15	chrX	+	2971	9	NIC	ENSMUSG00000031154.16	novel	2471	9	NA	NA	1	-4	intron_retention	FALSE	canonical	3	18	junction_1	181.540586026927	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7707603	7741095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
ES.36567.18	chrX	+	3636	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-464	1087	3	249	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACAACTGGTCGTGGTC	NA	False	NA	NA	False	NA	NA	NA	7707605	7741778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.19	chrX	+	2827	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	13	-6	intron_retention	FALSE	canonical	3	18	junction_7	155.023368876951	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAATCAACAAATCAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	7707615	7741093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740471
ES.36567.2	chrX	+	3418	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-494	1335	-27	1	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTATTCTGTGTGGGA	NA	False	NA	11	True	AATAAA	-23	NA	7707575	7741530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.21	chrX	+	4705	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	-449	3	18	3	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTGTTTGTGTGTGTC	NA	False	NA	19	True	AATAAA	-28	NA	7707620	7742862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.22	chrX	+	3348	7	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	24	2	intron_retention	FALSE	canonical	3	18	junction_6	165.706232699786	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAACTCTATTCTGTGT	NA	False	NA	7	True	AATAAA	-19	NA	7707626	7741526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740471
ES.36567.25	chrX	+	4315	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-42	1	intron_retention	FALSE	canonical	3	377	junction_7	48.4148737476408	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCAACTCTATTCTGTG	NA	False	NA	6	True	AATAAA	-18	NA	7708027	7741525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7739995_7740078_7740193_7740471
ES.36567.26	chrX	+	3420	6	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-35	0	intron_retention	FALSE	canonical	3	407	junction_5	40.1925366206215	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708034	7741529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792
ES.36567.27	chrX	+	2720	7	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-29	15	intron_retention	FALSE	canonical	3	377	junction_6	46.0341057140126	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7708040	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7740193_7740471
ES.36567.28	chrX	+	3999	11	Fusion	ENSMUSG00000031154.16_ENSMUSG00000031155.18	novel	2543	10	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_8	189.531026483792	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATTGCCATTTATAG	NA	False	NA	3	True	AATAAA	-13	NA	7708052	7749669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471_7740863_7747486_7747860_7748311_7748489_7748592
ES.36567.32	chrX	+	2769	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	98	-1	intron_retention	FALSE	canonical	3	78	junction_1	132.334566534976	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	False	NA	9	True	AATAAA	-21	NA	7708192	7741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.35	chrX	+	4249	8	ISM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-12	-1331	-12	1	intron_retention	FALSE	canonical	3	78	junction_1	134.62116157149	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	False	NA	17	True	AATAAA	-26	NA	7708308	7742860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792
ES.36567.36	chrX	+	3957	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-11	-11	intron_retention	FALSE	canonical	3	78	junction_1	126.100158604183	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGCTTACTTATCT	NA	False	NA	5	True	AATAAA	-14	NA	7708309	7742848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7740193_7740471
ES.36567.37	chrX	+	3984	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-9	3	intron_retention	FALSE	canonical	3	78	junction_1	132.334566534976	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTGTTTGTGTGTGTC	NA	False	NA	19	True	AATAAA	-28	NA	7708311	7742862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.38	chrX	+	1980	9	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-8	15	intron_retention	FALSE	canonical	0	0	junction_1	156.651683680706	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7708312	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708453_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.39	chrX	+	3883	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-8	-1332	-8	2	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTTGTTTGTGTGTGT	NA	False	NA	18	True	AATAAA	-27	NA	7708312	7742861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.40	chrX	+	2556	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	18	junction_7	155.023368876951	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAACTCTATTCTGT	NA	False	NA	5	True	AATAAA	-17	NA	7708317	7741524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740471
ES.36567.41	chrX	+	3803	11	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	1	4	junction_1	207.032002357124	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	False	NA	17	True	AATAAA	-26	NA	7708318	7742860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708402_7708474_7708708_7708836_7708950_7722545_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
ES.36567.42	chrX	+	3932	10	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-2	1	intron_retention	FALSE	non_canonical	1	4	junction_1	147.280533525499	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	False	NA	17	True	AATAAA	-26	NA	7708318	7742860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708402_7708474_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.43	chrX	+	3692	7	NIC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	377	junction_6	51.9788952898728	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7708319	7741095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7739995_7740078_7740193_7740471
ES.36567.46	chrX	+	2229	9	NNC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	0	0	junction_7	150.792697104336	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7708319	7741095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740088_7740193_7740471
ES.36567.47	chrX	+	2926	9	Fusion	ENSMUSG00000031154.16_ENSMUSG00000031155.18	novel	4259	9	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	1	junction_6	200.627609017303	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATTGCCATTTATAG	NA	False	NA	3	True	AATAAA	-13	NA	7708319	7749669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7747486_7747860_7748311_7748489_7748592
ES.36567.48	chrX	+	2427	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	177.674518080112	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAACTCTATTCTGTGT	NA	False	NA	7	True	AATAAA	-19	NA	7708319	7741526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740471
ES.36567.49	chrX	+	2169	10	NNC	ENSMUSG00000031154.16	novel	2471	9	NA	NA	-1	-4	intron_retention	FALSE	non_canonical	1	4	junction_1	176.263971515228	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAACAAATCAAAAAG	NA	False	NA	NA	False	ATTAAA	-17	NA	7708319	7741095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708402_7708474_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
ES.36567.5	chrX	+	3421	9	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	18	junction_1	150.996481747092	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	False	NA	9	True	AATAAA	-21	NA	7707583	7741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.50	chrX	+	4078	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	377	junction_7	42.6404043324246	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGCTTACTTATCTTG	NA	False	NA	7	True	AATAAA	-16	NA	7708319	7742850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7740193_7740471
ES.36567.51	chrX	+	4064	5	NNC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	-1	8	intron_retention	FALSE	canonical	3	37	junction_1	193.189673637076	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAGAATATTCATGGC	NA	False	NA	NA	False	ATTAAA	-29	NA	7708319	7741107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708950_7722545_7722637_7733753_7733819_7733905_7734311_7738234
ES.36567.52	chrX	+	2213	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-1	15	intron_retention	FALSE	canonical	3	78	junction_1	126.100158604183	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7708319	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7740193_7740471
ES.36567.56	chrX	+	3985	8	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	1	-4	intron_retention	FALSE	canonical	3	78	junction_1	141.467238581365	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCCTGAGCAACTCTAT	NA	False	NA	0	True	AATAAA	-12	NA	7708321	7741519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7739995_7740078_7740193_7740471
ES.36567.57	chrX	+	2929	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	1	159	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAGAATCTCTAGAGC	NA	False	NA	NA	False	ATTAAA	-24	NA	7708321	7741688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.58	chrX	+	2118	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	176.945970689388	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAATCAACAAATCAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	7708324	7741093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734078_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.6	chrX	+	3499	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGAGCAACTCTATTC	NA	False	NA	2	True	AATAAA	-14	NA	7707584	7741521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.60	chrX	+	4477	5	NIC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	10	-1	intron_retention	FALSE	canonical	3	410	junction_1	37.3856590151892	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	False	NA	9	True	AATAAA	-21	NA	7708330	7741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234
ES.36567.62	chrX	+	3821	10	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	173.913132850219	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATCTTGTTTGTGTGTGT	NA	False	NA	18	True	AATAAA	-27	NA	7708367	7742861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738241_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.64	chrX	+	2365	7	NIC	ENSMUSG00000031154.16	novel	2708	9	NA	NA	348	0	intron_retention	FALSE	canonical	3	377	junction_6	52.4520945456158	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGCAACTCTATTCTG	36	False	NA	4	True	AATAAA	-16	NA	7722313	7741523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.65	chrX	+	3403	8	NNC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	589	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.350542519684	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGATGCTTACTTATC	277	False	NA	4	True	AATAAA	-13	NA	7722554	7742847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7722637_7733753_7733819_7733905_7734063_7734107_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.66	chrX	+	3214	6	ISM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	25835	7	11939	-1	3prime_fragment	FALSE	canonical	3	377	junction_5	54.3455609962764	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTATCTTGTTTGTGTG	4020	False	NA	15	True	AATAAA	-24	NA	7733904	7742858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.67	chrX	+	1729	3	ISM	ENSMUSG00000031154.16	ENSMUST00000150644.8	2233	8	30596	-5	17474	-1	3prime_fragment	FALSE	canonical	3	94	junction_2	213.5	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	9555	False	NA	9	True	AATAAA	-21	NA	7739439	7741528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7739995_7740078_7740193_7740468
ES.36567.68	chrX	+	3354	1	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	17535	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	537	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTACTTATCTTGTTTG	9616	False	NA	11	True	AATAAA	-20	NA	7739500	7742854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7739500_7742900
ES.36567.69	chrX	+	3790	5	NIC	ENSMUSG00000031155.18	novel	2045	6	NA	NA	-1578	0	intron_retention	FALSE	canonical	3	69	junction_4	7.63216876123687	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCCATTTATAGAA	NA	False	NA	5	True	AATAAA	-15	NA	7742922	7749671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
ES.36567.7	chrX	+	4649	10	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	-18	1	intron_retention	FALSE	non_canonical	0	0	junction_4	185.479425500379	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	False	NA	17	True	AATAAA	-26	NA	7707584	7742860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733815_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.70	chrX	+	1539	3	NIC	ENSMUSG00000031155.18	novel	2045	6	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	32.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGATTGCCATTTATAGA	NA	False	NA	4	True	AATAAA	-14	NA	7744511	7749670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7744796_7748311_7748489_7748592
ES.36567.71	chrX	+	2066	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	-23	2	17	-2	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATTGCCATTTATAG	NA	False	NA	3	True	AATAAA	-13	NA	7744517	7749669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
ES.36567.72	chrX	+	4362	2	ISM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	-8	650	-8	-650	intron_retention	FALSE	canonical	3	85	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTCCCTCTGGGCCCT	NA	False	NA	NA	False	NA	NA	NA	7744532	7749021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7744796_7744922
ES.36567.74	chrX	+	2048	6	NNC	ENSMUSG00000031155.18	novel	2045	6	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.5150757574847	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATTGCCATTTATAG	NA	False	NA	3	True	AATAAA	-13	NA	7744547	7749669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7744796_7744922_7745033_7745854_7745918_7747486_7747860_7748311_7748489_7748592
ES.36567.75	chrX	+	2522	3	FSM	ENSMUSG00000031155.18	ENSMUST00000126715.2	1100	3	49	-1471	9	391	multi-exon	FALSE	canonical	3	85	junction_1	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCTGGGCTCTTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	7744549	7748032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7744796_7744922_7745033_7745866
ES.36567.8	chrX	+	2861	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	-733	415	-15	15	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7707587	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36567.9	chrX	+	3081	8	NIC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	-7	15	intron_retention	FALSE	canonical	3	377	junction_7	51.3459654039663	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTCATGGCAACGTTG	NA	False	NA	NA	False	ATTAAA	-36	NA	7707595	7741114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ES.36568.1	chrX	-	260	1	Intergenic	novelGene_29938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAAATTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	7724486	7724226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7724200_7724500
ES.36569.1	chrX	+	5705	3	NIC	ENSMUSG00000031156.19	novel	1757	4	NA	NA	4	1	intron_retention	FALSE	canonical	0	0	junction_2	42	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTAGCTTTCTGAC	NA	False	NA	7	True	AATAAA	-19	NA	7750281	7760267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7750673_7751987_7756003_7758968
ES.36569.10	chrX	+	797	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	0	-103	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	379.892748022386	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7765709_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.11	chrX	+	962	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	2	-117	intron_retention	FALSE	canonical	3	843	junction_3	49.2290564605904	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGAAATGTCTGTGTA	1191	False	NA	17	True	TTTAAA	-4	NA	7765597	7773092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772631_7772726
ES.36569.12	chrX	+	831	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	2	-103	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	399.088570996464	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1191	False	NA	31	True	TTTAAA	-18	NA	7765597	7773106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7765709_7767199_7767300_7772309_7772439_7772519_7772631_7772726
ES.36569.13	chrX	+	2372	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	10	-1	10	1	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCTTGCTGTTTGTCT	1199	False	NA	3	True	NA	NA	NA	7765605	7774591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.14	chrX	+	1693	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	13	675	13	-675	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAAGCTGGGCAGTGC	1202	False	NA	NA	False	NA	NA	NA	7765608	7773915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.15	chrX	+	2442	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	19	-1	intron_retention	FALSE	canonical	3	843	junction_3	49.2290564605904	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGCTGTTTGT	1208	False	NA	1	True	NA	NA	NA	7765614	7774589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772631_7772726
ES.36569.16	chrX	+	932	6	NIC	ENSMUSG00000031158.12	novel	438	5	NA	NA	-55	-105	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	366.586088115739	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTATGTCTGCCTTCA	1448	False	NA	29	True	TTTAAA	-16	NA	7765854	7773104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7766005_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.17	chrX	+	613	3	ISM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	6712	1493	-45	-112	3prime_fragment	FALSE	canonical	3	898	junction_2	13.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTCTGTGTATGTCT	4767	False	NA	22	True	TTTAAA	-9	NA	7772307	7773097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7772439_7772519_7772631_7772726
ES.36569.2	chrX	+	2682	5	NNC	ENSMUSG00000031156.19	novel	1991	5	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_2	44.0908153700972	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750285	7760266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7750673_7751987_7752171_7752390_7752463_7755850_7756003_7758378
ES.36569.3	chrX	+	2354	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	274	466	-8	-1	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCATGTGTAGCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	7750540	7760265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
ES.36569.4	chrX	+	2782	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	280	32	-2	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTGGGTTGGAAAGCC	NA	False	NA	NA	False	AATAAA	-16	NA	7750546	7760699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
ES.36569.5	chrX	+	4725	3	ISM	ENSMUSG00000031156.19	ENSMUST00000096514.11	1757	4	-2	0	-2	0	intron_retention	FALSE	canonical	3	84	junction_1	11	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750546	7760266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7750673_7751987_7752171_7755850
ES.36569.6	chrX	+	2962	7	Fusion	ENSMUSG00000031156.19_ENSMUSG00000031158.12	novel	1527	5	NA	NA	2	360	intron_retention	TRUE	canonical	0	0	junction_3	414.631161395282	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	7750573	7774950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_7750673_7751987_7752171_7755850_7756003_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.7	chrX	+	179	1	Intergenic	novelGene_29939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGCTAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	7756784	7756963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7756800_7757000
ES.36569.8	chrX	+	916	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	-19	1484	-19	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1170	False	NA	31	True	TTTAAA	-18	NA	7765576	7773106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.36569.9	chrX	+	2795	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	-19	-395	-19	395	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTCTCAGTATTATTGT	1170	False	NA	NA	False	AATAAA	-3	NA	7765576	7774985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ES.3657.1	chr10	+	7847	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-93	-5	7	5	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATGATTGGTTTGCTT	2686	False	NA	19	True	ATTAAA	-31	NA	95776518	95881385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.11	chr10	+	6980	21	NIC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	3	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	12.2131077126176	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGTTATCCAATGACT	2740	False	NA	4	True	ATTAAA	-16	NA	95776572	95881370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95776835_95809847_95809941_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.12	chr10	+	4616	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-38	3171	4	-3171	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGGGTTCATCTTT	2741	False	NA	NA	False	AGTAAA	-16	NA	95776573	95878209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.15	chr10	+	6280	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-23	1492	19	-1492	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGACACTGGAGACTTT	2756	False	NA	NA	False	ATTAAA	-25	NA	95776588	95879888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.16	chr10	+	5479	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-20	2290	-20	-2290	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAAATACAGCGACAGAA	2759	False	NA	NA	False	NA	NA	NA	95776591	95879090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.17	chr10	+	8289	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-12	-528	-12	528	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGAGCTATTTGTATTTT	2767	False	NA	NA	False	TATAAA	-24	NA	95776599	95881908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.19	chr10	+	7884	30	NIC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	12.7565701986955	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGACTATGATTGGTT	2770	False	NA	14	True	ATTAAA	-26	NA	95776602	95881380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95776835_95809847_95809941_95814022_95814149_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.2	chr10	+	8079	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-63	-267	-4	267	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTCATTGTATATATA	2716	False	NA	NA	False	ATTAAA	-14	NA	95776548	95881647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.21	chr10	+	7057	30	NNC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	0	-389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	10.7776136507465	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAGTAATGAACTTACT	2779	False	NA	NA	False	AATAAA	-24	NA	95776611	95880991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943_95878090_95878392
ES.3657.22	chr10	+	7616	29	NNC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	103	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.9653326629046	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGTTATCCAATGAC	2889	False	NA	3	True	ATTAAA	-15	NA	95776721	95881369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95776823_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.23	chr10	+	6366	20	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	62135	388	62128	-388	3prime_fragment	FALSE	canonical	3	33	junction_6	7.22108332048105	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAATGAACTTACTG	NA	False	NA	NA	False	AATAAA	-25	NA	95838746	95880992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.24	chr10	+	7823	18	NIC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	70024	-381	intron_retention	FALSE	canonical	3	37	junction_6	6.74754857446065	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTTACTGTAACATG	NA	False	NA	NA	False	AATAAA	-32	NA	95846642	95880999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.25	chr10	+	6185	18	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	71332	114	71325	-114	3prime_fragment	FALSE	canonical	3	33	junction_4	7.50501562393916	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCATTTAAATCTGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	95847943	95881266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.26	chr10	+	5705	17	NNC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	77259	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.5379962974585	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTATCCAATGACTAT	NA	False	NA	6	True	ATTAAA	-18	NA	95853877	95881372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943_95878090_95878392
ES.3657.3	chr10	+	5089	29	NNC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	-2	-2717	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	10.9637622024857	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCCTATGTAAAATTT	2718	False	NA	NA	False	ATTAAA	-18	NA	95776550	95878663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867376_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.4	chr10	+	7224	28	NIC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	1	-388	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	11.159892915102	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAATGAACTTACTG	2721	False	NA	NA	False	AATAAA	-25	NA	95776553	95880992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.6	chr10	+	7689	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-54	114	5	-114	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCATTTAAATCTGTAT	2725	False	NA	NA	False	AATAAA	-18	NA	95776557	95881266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.7	chr10	+	7796	29	NNC	ENSMUSG00000036499.10	novel	7749	29	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	10.9495014330632	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAATGACTATGATTGGT	2725	False	NA	13	True	ATTAAA	-25	NA	95776557	95881379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849173_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.8	chr10	+	7420	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-52	381	7	-381	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTTACTGTAACATG	2727	False	NA	NA	False	AATAAA	-32	NA	95776559	95880999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.3657.9	chr10	+	4773	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	-49	3025	-7	-3025	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATGACTACAATTCCT	2730	False	NA	NA	False	AATATA	-15	NA	95776562	95878355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ES.36570.1	chrX	-	1208	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	2	-62	2	-2	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	588	False	NA	-3	True	AATAAA	-20	NA	7765216	7760759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ES.36570.2	chrX	-	1391	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	-289	2	-289	-2	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	7	True	NA	-3	True	AATAAA	-20	NA	7765797	7760759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
ES.36570.3	chrX	-	1033	7	FSM	ENSMUSG00000031157.11	ENSMUST00000156741.8	763	7	3	-273	3	-2	multi-exon	FALSE	canonical	3	64	junction_6	182.287014226345	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	568	False	NA	-3	True	AATAAA	-20	NA	7765236	7760759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765204
ES.36570.4	chrX	-	1196	7	NIC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	591	False	NA	-3	True	AATAAA	-20	NA	7765213	7760759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
ES.36570.5	chrX	-	1204	7	NNC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	205.498310347203	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGAGGCTTGAGTGCT	598	False	NA	-3	True	AATAAA	-20	NA	7765206	7760759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7761107_7761403_7761468_7761836_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ES.36570.7	chrX	-	1047	7	NNC	ENSMUSG00000031157.11	novel	1104	7	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_6	202.606145020332	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCATGAGGCTTGAGTG	641	False	NA	-5	True	AATAAA	-18	NA	7765163	7760761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765115
ES.36570.8	chrX	-	3476	5	NNC	ENSMUSG00000031157.11	novel	1148	7	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	236.730859838763	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCATGAGGCTTGAGTG	586	False	NA	-5	True	AATAAA	-18	NA	7765218	7760761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762543
ES.36571.1	chrX	-	167	1	Intergenic	novelGene_29940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7775412	7775245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7775200_7775400
ES.36572.1	chrX	+	171	1	Intergenic	novelGene_29941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATATCTC	4766	False	NA	NA	False	NA	NA	NA	7779541	7779712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7779500_7779700
ES.36573.1	chrX	+	991	3	FSM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	27	1175	27	-1175	multi-exon	FALSE	canonical	3	43	junction_1	26.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGTCTGAGCGCCCT	NA	False	NA	5	True	AATAAA	-15	NA	7786087	7789474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7786284_7788286_7788754_7789146
ES.36573.2	chrX	+	2945	2	NIC	ENSMUSG00000039278.11	novel	2193	3	NA	NA	75	-1176	intron_retention	FALSE	canonical	3	96	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTTGTCTGAGCGCCC	NA	False	NA	4	True	AATAAA	-14	NA	7786135	7789473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7788754_7789146
ES.36574.1	chrX	-	1039	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	30	8	30	-8	multi-exon	FALSE	canonical	3	21	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATACTAAATCTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	7794816	7790522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7791453_7794707
ES.36574.13	chrX	-	3973	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-33	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_28	82.6919227109435	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814039	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813473_7813888
ES.36574.14	chrX	-	5108	27	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	12	4	intron_retention	FALSE	canonical	3	77	junction_26	74.0306988937577	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814065	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
ES.36574.16	chrX	-	6335	26	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	29	4	intron_retention	FALSE	canonical	3	320	junction_24	44.0378746081143	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814048	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7812991_7813141_7813271_7813363
ES.36574.17	chrX	-	3990	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	84.3654586441922	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814051	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813369_7813484_7813888
ES.36574.2	chrX	-	1070	3	NNC	ENSMUSG00000031160.5	novel	1077	2	NA	NA	141	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAAAGCTTCCTTTATA	NA	False	NA	NA	False	AATAAA	-10	NA	7794705	7790535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7791453_7793757_7793887_7794681
ES.36574.20	chrX	-	4205	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	-57	-6	-57	4	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814185	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
ES.36574.21	chrX	-	3876	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_28	82.8505770181771	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814130	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7814087
ES.36574.22	chrX	-	3009	21	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	97.8846770439582	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814039	7796360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803204_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.23	chrX	-	4075	28	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	14	0	intron_retention	FALSE	canonical	3	285	junction_27	47.2746114620616	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814063	7796360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.24	chrX	-	4021	28	NNC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	11	0	intron_retention	FALSE	canonical	3	34	junction_27	79.3190843793371	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814066	7796360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813945
ES.36574.25	chrX	-	5584	25	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	11	0	intron_retention	FALSE	canonical	3	321	junction_15	43.6687141695542	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814066	7796360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7813271_7813363
ES.36574.28	chrX	-	3968	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	84.7896782681496	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814020	7796360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805781_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.3	chrX	-	4499	7	NNC	ENSMUSG00000031161.16	novel	932	7	NA	NA	-15	4490	intron_retention	TRUE	non_canonical	0	0	junction_1	146.039283147454	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAACAGTTATTTGTCAT	NA	False	NA	NA	False	AAAACA	-5	NA	7814021	7791868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7791889_7807145_7808152_7808271_7808377_7809625_7809977_7810812_7810854_7810952_7813271_7813363
ES.36574.31	chrX	-	4170	30	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-4092	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	106.246589089826	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGTGCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	7818220	7796362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7814991_7815234_7818117
ES.36574.32	chrX	-	6366	20	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	2506	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	99.2812396323509	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7810892	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800794_7800843_7802690_7803180_7803315_7803542_7803712_7803865_7804251_7804464_7804533_7804624_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812
ES.36574.34	chrX	-	5470	26	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	180	-2	intron_retention	TRUE	non_canonical	0	0	junction_7	87.654722633752	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7813218	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800792_7800839_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141
ES.36574.38	chrX	-	4255	27	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	12	-2	intron_retention	FALSE	canonical	1	2	junction_6	86.0841493495218	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814065	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
ES.36574.39	chrX	-	4036	29	NNC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	-31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	83.3272072578204	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814037	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813473_7813813
ES.36574.4	chrX	-	4669	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	94	-694	-28	694	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTATGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	7814034	7795664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.41	chrX	-	2187	12	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	12	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	130.616212781271	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814065	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802430_7812959_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.43	chrX	-	3912	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	1	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	84.7978388249827	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814076	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803613_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.45	chrX	-	3961	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.8462219403494	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814032	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808277_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.46	chrX	-	4243	26	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_16	113.766314873956	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814048	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7812901_7812991_7813141_7813271_7813363
ES.36574.47	chrX	-	4098	29	NNC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	99.6171433795511	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814064	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808176_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
ES.36574.48	chrX	-	5311	27	NNC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	-31	-2	intron_retention	FALSE	non_canonical	0	0	junction_17	86.1363306370854	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814037	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7805772_7805844_7805905_7805998_7806049_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
ES.36574.49	chrX	-	3910	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-136	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	83.0093429705847	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814264	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7814177
ES.36574.5	chrX	-	4079	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	-5	-5	-5	5	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTTTTTATTTTG	NA	False	NA	NA	False	AATAAA	-30	NA	7814133	7796353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.50	chrX	-	3996	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	84.8462219403494	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGAAAGTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	7814063	7796364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808146_7808267_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.51	chrX	-	4051	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	84.8028551093292	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGAAAGTGCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	7814124	7796365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809632_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.52	chrX	-	3974	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.5874246553141	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGAAGAAAGTGCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	7814062	7796366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797268_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.53	chrX	-	3985	30	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	124.269901116177	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGAAGAAAGTGCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	7814020	7796366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7804870_7804914_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813473_7813888
ES.36574.54	chrX	-	4080	28	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	16	-5	intron_retention	FALSE	canonical	3	285	junction_27	47.6136140345029	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTGAAGAAAGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	7814061	7796367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.55	chrX	-	3887	28	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	85.8384931926245	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7814016	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.57	chrX	-	4310	24	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	2416	-6	intron_retention	FALSE	canonical	0	0	junction_15	90.53917469808	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7810982	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7804870_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952
ES.36574.58	chrX	-	1634	8	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	158.729265076849	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7814022	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800499_7813931
ES.36574.6	chrX	-	3984	28	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	15	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	109.446869685481	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814062	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809997_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813482_7813888
ES.36574.61	chrX	-	3898	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	123.144115629963	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7814035	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798478_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810824_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813945
ES.36574.64	chrX	-	3943	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	84.8358559158779	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7814019	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804721_7805677_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.65	chrX	-	2388	11	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	925	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	123.267351719748	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7803986	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797395_7797518_7797621_7797704_7798199_7798301_7798478_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865
ES.36574.69	chrX	-	2556	12	NIC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	657	-6	intron_retention	FALSE	canonical	3	352	junction_8	49.2730627294854	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7804254	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081
ES.36574.7	chrX	-	3982	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_28	77.9875709615949	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814094	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813945
ES.36574.71	chrX	-	6413	23	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	13	-6	intron_retention	FALSE	canonical	0	0	junction_10	92.0781760020678	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7814064	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7813271_7813363
ES.36574.72	chrX	-	4903	23	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	1075	-6	intron_retention	FALSE	canonical	2	4	junction_20	91.1264333742089	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7812323	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809693_7809879_7809977_7810812_7810854_7810952
ES.36574.73	chrX	-	3676	26	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	2055	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	86.9437151265116	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGAAGAAAGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	7811343	7796368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7811148
ES.36574.74	chrX	-	5350	27	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	12	-7	intron_retention	FALSE	canonical	3	320	junction_25	44.5153553721109	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACCTGAAGAAAGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	7814065	7796369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
ES.36574.75	chrX	-	4138	27	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	22	-7	intron_retention	FALSE	canonical	3	285	junction_26	46.5366337848331	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACCTGAAGAAAGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	7813984	7796369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7813271_7813363_7813484_7813888
ES.36574.76	chrX	-	8294	18	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	1986	-8	intron_retention	FALSE	non_canonical	0	0	junction_7	104.107909149136	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACCTGAAGAAAGTGC	NA	False	NA	NA	False	AATAAA	-13	NA	7811412	7796370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800792_7800839_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7806065_7806156_7806284_7808082_7808152_7808271_7809977_7810812
ES.36574.79	chrX	-	3839	28	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-21	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	109.611885450889	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAACCTGAAGAAAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	7814027	7796371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813473_7813888
ES.36574.8	chrX	-	4566	27	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	12	4	intron_retention	FALSE	canonical	3	321	junction_17	42.6341946823558	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814065	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7813271_7813363
ES.36574.81	chrX	-	3186	10	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	1141	-13	intron_retention	FALSE	canonical	0	0	junction_7	140.224247212003	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCTACAAAACCTGAAGAA	NA	False	NA	NA	False	AATAAA	-8	NA	7803770	7796375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7801463_7802690_7803180_7803315_7803542
ES.36574.82	chrX	-	3808	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	63	198	12	-194	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAGTGTTCAGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	7814065	7796556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ES.36574.84	chrX	-	6760	1	NIC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	-91	2514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGAACTGGGGACG	NA	False	NA	NA	False	NA	NA	NA	7813883	7807123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7807100_7813900
ES.36574.9	chrX	-	10674	18	NNC	ENSMUSG00000031161.16	novel	5037	27	NA	NA	14	4	intron_retention	TRUE	non_canonical	0	0	junction_7	105.188872804768	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTTTTTTTTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	7814063	7796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800794_7800843_7802690_7803180_7803712_7803865_7804251_7804464_7804533_7804624_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7813271_7813363
ES.36575.1	chrX	+	515	3	Antisense	novelGene_ENSMUSG00000031162.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGATGGTCTAGAAAT	NA	False	NA	NA	False	TTTAAA	-9	NA	7818369	7842953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_7818511_7820013_7820112_7842677
ES.36575.2	chrX	+	161	1	Intergenic	novelGene_29942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAATCTTAATG	NA	False	NA	NA	False	NA	NA	NA	7818933	7819094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7818900_7819100
ES.36576.1	chrX	-	147	1	Intergenic	novelGene_29943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGTCAGAAAATAGCC	NA	False	NA	NA	False	NA	NA	NA	7850503	7850356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7850400_7850500
ES.36577.1	chrX	-	156	1	Intergenic	novelGene_29944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	7863609	7863453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7863500_7863600
ES.36578.1	chrX	+	147	1	Intergenic	novelGene_29945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGTCTTTGATGAA	NA	False	NA	NA	False	NA	NA	NA	7864703	7864850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7864700_7864800
ES.36579.1	chrX	-	969	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2661	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	19.4821855949366	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTTCCTCACTCTTG	NA	False	NA	-15	True	AATAAA	-15	NA	7882070	7870444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7870742_7871941_7872098_7881456_7881548_7881645
ES.36579.2	chrX	-	969	4	NNC	ENSMUSG00000031163.3	novel	673	4	NA	NA	2642	-6	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	9.28559218478941	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTTCCTCACTCTTG	NA	False	NA	-15	True	AATAAA	-15	NA	7882089	7870444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7870742_7871941_7872098_7881456_7881595_7881711
ES.36579.3	chrX	-	178	1	Intergenic	novelGene_29946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGCATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	7878261	7878083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7878100_7878300
ES.3658.1	chr10	-	9223	1	Intergenic	novelGene_2797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	95791961	95782738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95782700_95792000
ES.36580.1	chrX	+	176	1	Intergenic	novelGene_29947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATAAGACAAAACAA	4013	False	NA	NA	False	NA	NA	NA	7888343	7888519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7888300_7888500
ES.36581.1	chrX	-	176	1	Intergenic	novelGene_29948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7899948	7899772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7899800_7899900
ES.36582.1	chrX	+	3732	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-239	379	intron_retention	FALSE	canonical	3	17	junction_1	48	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGATGTCCGTTTCCAT	7412	False	NA	NA	False	AATAAA	-19	NA	7915171	7941237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7915823_7936874_7937304_7938585
ES.36582.10	chrX	+	1409	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-303	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	9767	False	NA	26	True	TATAAA	-16	NA	7917526	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7936874_7937304_7938585
ES.36582.11	chrX	+	1435	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-90	-168	-90	165	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATTTCACTTTTAAAAA	9980	False	NA	NA	False	ATTAAA	-12	NA	7917739	7939363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
ES.36582.12	chrX	+	1188	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	-11	0	-11	0	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	NA	False	NA	26	True	TATAAA	-16	NA	7917818	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
ES.36582.13	chrX	+	1290	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-9	172	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTTAAAAATCCCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	7917820	7939370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7936874_7937304_7938585
ES.36582.14	chrX	+	3154	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-5	380	intron_retention	FALSE	canonical	3	67	junction_1	23	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATGTCCGTTTCCATC	NA	False	NA	NA	False	AATAAA	-20	NA	7917824	7941238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7936874_7937304_7938585
ES.36582.15	chrX	+	3568	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-3	796	intron_retention	FALSE	canonical	3	67	junction_1	23	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACAATGAGATC	NA	False	NA	NA	False	AATAAA	-10	NA	7917826	7941654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7936874_7937304_7938585
ES.36582.16	chrX	+	1320	4	NNC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.0345799141152	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTCCTGGGCCACTGG	NA	False	NA	24	True	TATAAA	-14	NA	7917827	7939193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7917897_7920479_7920694_7936874_7937304_7938585
ES.36582.17	chrX	+	993	4	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-1	380	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	24.1430919496424	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATGTCCGTTTCCATC	NA	False	NA	NA	False	AATAAA	-20	NA	7917828	7941238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7926454_7926526_7936874_7937304_7940813
ES.36582.18	chrX	+	4404	3	NNC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	-1	258	intron_retention	FALSE	canonical	0	0	junction_2	28	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCAGTCATTTATT	NA	False	NA	NA	False	CATAAA	-22	NA	7917828	7941116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7917897_7926454_7926549_7936874
ES.36582.19	chrX	+	1476	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	5	-304	5	301	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTAGACCCAGGAAAGG	NA	False	NA	NA	False	TATAAA	-44	NA	7917834	7939499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
ES.36582.2	chrX	+	1684	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-233	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	7418	False	NA	26	True	TATAAA	-16	NA	7915177	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7915823_7936874_7937304_7938585
ES.36582.20	chrX	+	1591	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	5	863	5	-148	5prime_fragment	FALSE	canonical	3	56	junction_1	9.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGCCTCTTGTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	7917834	7938332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7917897_7926454_7926526_7936874
ES.36582.21	chrX	+	2623	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	5	-169	5	166	intron_retention	FALSE	canonical	3	56	junction_1	9.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTCACTTTTAAAAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	7917834	7939364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7917897_7926454_7926526_7936874
ES.36582.22	chrX	+	1343	4	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	30.4667396060396	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	NA	False	NA	26	True	TATAAA	-16	NA	7917834	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7917897_7926454_7926526_7936874_7937475_7938585
ES.36582.23	chrX	+	3155	3	ISM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	8624	-2044	8624	381	3prime_fragment	FALSE	canonical	3	75	junction_1	19	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGTCCGTTTCCATCA	3272	False	NA	NA	False	AATAAA	-21	NA	7926453	7941239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7926526_7936874_7937304_7938585
ES.36582.24	chrX	+	188	1	Intergenic	novelGene_29950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGGGTCAT	NA	False	NA	NA	False	NA	NA	NA	7936207	7936395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7936200_7936400
ES.36582.25	chrX	+	4101	1	Genic_Genomic	ENSMUSG00000087193.8	novel	NA	NA	NA	NA	19307	379	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGATGTCCGTTTCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	7937136	7941237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_7937100_7941200
ES.36582.26	chrX	+	702	1	Genic_Genomic	ENSMUSG00000087193.8	novel	NA	NA	NA	NA	21287	620	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTAGGTGTATGCTGTCA	NA	False	NA	NA	False	TTTAAA	-29	NA	7939116	7939818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_7939100_7939800
ES.36582.3	chrX	+	1993	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-264	-280	-188	280	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGGCATAGTGGTGCA	7463	False	NA	NA	False	TATAAA	-23	NA	7915222	7939478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
ES.36582.4	chrX	+	814	2	ISM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	-130	12396	-54	739	5prime_fragment	FALSE	canonical	3	19	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGTTTCTGACCAGTA	7597	False	NA	NA	False	ATTAAA	-16	NA	7915356	7926802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_7915823_7926454
ES.36582.5	chrX	+	1693	3	NNC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-15	-150	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7.5	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTGCCTCTTGTTCTC	7712	False	NA	NA	False	NA	NA	NA	7915471	7938330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_7915823_7936874_7937304_7937417
ES.36582.6	chrX	+	1572	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	-14	180	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTTGCCATGATT	7713	False	NA	NA	False	ATTAAA	-27	NA	7915472	7939378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7915823_7936874_7937304_7938585
ES.36582.7	chrX	+	613	1	NIC	ENSMUSG00000087193.8	novel	617	2	NA	NA	-11	-9975	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAGGGTTGAAGT	7716	False	NA	NA	False	NA	NA	NA	7915475	7916088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7915500_7916100
ES.36582.8	chrX	+	1515	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	7	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	7758	False	NA	26	True	TATAAA	-16	NA	7915517	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_7915823_7936874_7937475_7938585
ES.36582.9	chrX	+	1317	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	129	3	49	0	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	7856	False	NA	26	True	TATAAA	-16	NA	7915615	7939195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
ES.36583.1	chrX	-	1417	1	Antisense	novelGene_ENSMUSG00000087193.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	9451	False	NA	NA	False	NA	NA	NA	7919065	7917648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_7917600_7919100
ES.36583.2	chrX	-	1644	1	Intergenic	novelGene_29949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTATTTTATATAGATA	8741	False	NA	NA	False	NA	NA	NA	7919775	7918131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7918100_7919800
ES.36584.1	chrX	-	2973	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-21	-174	-21	-90	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATAGTCCAGCTTTTT	7334	False	NA	NA	False	TATAAA	-32	NA	7940518	7927499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.10	chrX	-	2098	4	NIC	ENSMUSG00000039231.19	novel	2807	5	NA	NA	36	-1	intron_retention	FALSE	canonical	1	1	junction_2	43.6450328088878	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7028	False	NA	NA	False	NA	NA	NA	7940824	7927674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7929223_7929934_7930297_7938561_7938708_7940782
ES.36584.11	chrX	-	2654	6	NNC	ENSMUSG00000039231.19	novel	3116	6	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.7784992724149	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7032	False	NA	NA	False	NA	NA	NA	7940820	7927674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7929223_7929934_7930047_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.12	chrX	-	2787	6	NNC	ENSMUSG00000039231.19	novel	2778	6	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.4227658628155	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAAGCTTGAGATTTGG	7334	False	NA	NA	False	NA	NA	NA	7940518	7927676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938570_7938708_7940354
ES.36584.13	chrX	-	1833	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	47	927	47	-918	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTTGCAGGCCTCTTCA	7039	False	NA	NA	False	NA	NA	NA	7940813	7928591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.14	chrX	-	1875	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-43	946	12	-946	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTTCTGCTTGGAGCT	7312	False	NA	NA	False	NA	NA	NA	7940540	7928619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.15	chrX	-	1721	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-7	1064	-7	-1064	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGCAGCTCTATG	7348	False	NA	NA	False	AAAACA	-18	NA	7940504	7928737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.16	chrX	-	1628	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	158	1330	19	-1066	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCTCTGCAGCTCTA	7011	False	NA	NA	False	AAAACA	-16	NA	7940841	7928739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.17	chrX	-	1462	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	10	1306	10	-1306	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCCTCACCTACCCTA	7365	False	NA	NA	False	NA	NA	NA	7940487	7928979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.18	chrX	-	1728	4	NIC	ENSMUSG00000039231.19	novel	2778	6	NA	NA	-15	-1862	intron_retention	FALSE	canonical	3	73	junction_3	19.6015872373189	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTTGGCAGATAGTGG	7340	False	NA	NA	False	ATTAAA	-14	NA	7940512	7929535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.19	chrX	-	3673	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	11	-2518	11	-502	multi-exon	FALSE	canonical	3	73	junction_2	20	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGATTGTTTTGTTTTGT	7311	False	NA	NA	False	NA	NA	NA	7940541	7934149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7937490_7938561_7938708_7940354
ES.36584.2	chrX	-	2861	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	2	253	2	2	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGAGATTGAGGTCTT	9882	False	NA	NA	False	NA	NA	NA	7940997	7927662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.20	chrX	-	3699	3	ISM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	-137	6487	2	-504	5prime_fragment	FALSE	canonical	3	87	junction_2	13	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGATTGTTTTGTTTT	9882	False	NA	NA	False	NA	NA	NA	7940997	7934151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_7937490_7938561_7938708_7940782
ES.36584.21	chrX	-	3700	4	NNC	ENSMUSG00000039231.19	novel	1166	3	NA	NA	-10	-504	intron_retention	FALSE	canonical	0	0	junction_1	34.4125300177453	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGATTGTTTTGTTTT	7345	False	NA	NA	False	NA	NA	NA	7940507	7934151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7937490_7938235_7938301_7938563_7938708_7940354
ES.36584.22	chrX	-	1116	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	35	15	-20	-15	multi-exon	FALSE	canonical	3	73	junction_2	20	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACACTGAAGTATTC	7335	False	NA	NA	False	AAGAAA	-40	NA	7940517	7936682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7937490_7938561_7938708_7940354
ES.36584.3	chrX	-	3581	5	NIC	ENSMUSG00000039231.19	novel	3116	6	NA	NA	-8	0	intron_retention	FALSE	canonical	3	87	junction_4	12.6688594593199	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGGAGATTGAGGTC	9872	False	NA	NA	False	NA	NA	NA	7941007	7927664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.4	chrX	-	4341	2	ISM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	7772	-1	7772	1	intron_retention	FALSE	canonical	3	99	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTGAGATTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	7932725	7927672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_7929223_7929934
ES.36584.5	chrX	-	3124	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	-345	-1	18	1	multi-exon	FALSE	canonical	3	73	junction_5	15.551205741035	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTGAGATTTGGGAGA	7010	False	NA	NA	False	NA	NA	NA	7940842	7927672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.6	chrX	-	2776	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	22	9	22	0	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	7014	False	NA	NA	False	NA	NA	NA	7940838	7927673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
ES.36584.7	chrX	-	2903	5	NIC	ENSMUSG00000039231.19	novel	2778	6	NA	NA	14	-1	intron_retention	FALSE	canonical	3	73	junction_4	16.9908063375462	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7314	False	NA	NA	False	NA	NA	NA	7940538	7927674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940354
ES.36584.8	chrX	-	2861	6	NNC	ENSMUSG00000039231.19	novel	2778	6	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	40.8734632738651	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTTGAGATTTGGGA	7280	False	NA	NA	False	NA	NA	NA	7940572	7927674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7929223_7929925_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ES.36585.1	chrX	+	148	1	Intergenic	novelGene_29951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	7948591	7948739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7948600_7948700
ES.36586.1	chrX	-	2356	12	NNC	ENSMUSG00000031165.7	novel	2114	12	NA	NA	43	287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.65685424949238	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTTATGATTTGGG	7484	False	NA	NA	False	TTTAAA	-6	NA	7956694	7947404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7948229_7951744_7951860_7952080_7952536_7952802_7952957_7953168_7953212_7953999_7954175_7954962_7955015_7955112_7955155_7955274_7955378_7955494_7955582_7956082_7956224_7956529
ES.36587.1	chrX	-	196	1	Intergenic	novelGene_29952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGACATTCTGAGTGAC	6442	False	NA	NA	False	NA	NA	NA	7961404	7961208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7961200_7961400
ES.36588.1	chrX	-	134	1	Intergenic	novelGene_29953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	6040	False	NA	NA	False	NA	NA	NA	7961806	7961672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7961700_7961800
ES.36589.1	chrX	-	171	1	Intergenic	novelGene_29954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCAGGCTGGTG	2867	False	NA	NA	False	NA	NA	NA	7964979	7964808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_7964800_7965000
ES.3659.1	chr10	-	264	1	Intergenic	novelGene_2798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	95943283	95943019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_95943000_95943300
ES.36590.1	chrX	+	177	2	Intergenic	novelGene_29955	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAAATCTCCGT	3925	False	NA	NA	False	NA	NA	NA	7970278	7975509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7970439_7975492
ES.36590.2	chrX	+	162	1	Intergenic	novelGene_29956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	7294	False	NA	NA	False	NA	NA	NA	7973647	7973809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_7973600_7973800
ES.36591.1	chrX	-	4207	9	FSM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	-25	1	-10	-1	multi-exon	FALSE	canonical	3	18	junction_8	7.92839044194974	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCCTCTCTTCATTT	6896	False	NA	0	True	AATAAA	-45	NA	7999072	7989540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
ES.36591.10	chrX	-	4726	9	NNC	ENSMUSG00000031166.14	novel	4374	9	NA	NA	11	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	13.536409235835	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	6932	False	NA	-2	True	AATAAA	-43	NA	7999036	7989542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623
ES.36591.11	chrX	-	3225	6	NNC	ENSMUSG00000031166.14	novel	4183	9	NA	NA	-763	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	20.9437341465174	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	NA	False	NA	-2	True	AATAAA	-43	NA	7995519	7989542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7994809_7994865_7995217
ES.36591.12	chrX	-	3492	9	NNC	ENSMUSG00000031166.14	novel	4183	9	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.6984286025624	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	7190	False	NA	-2	True	AATAAA	-43	NA	7998778	7989542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7996248_7996373_7996494_7996605_7997623_7997865_7998525
ES.36591.15	chrX	-	5819	7	NNC	ENSMUSG00000031166.14	novel	4374	9	NA	NA	99	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	15.3776533392525	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGACTTGGGCCTCTCTTC	7317	False	NA	-4	True	AATAAA	-41	NA	7998651	7989544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7996373_7996494_7996605_7997623
ES.36591.16	chrX	-	4269	8	NNC	ENSMUSG00000031166.14	novel	4374	9	NA	NA	406	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.4603610195709	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGACTTGGGCCTCTCTTC	7624	False	NA	-4	True	AATAAA	-41	NA	7998344	7989544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996738_7997623
ES.36591.17	chrX	-	3667	11	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-49	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.3661235483544	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGACTTGGGCCTCTCTTC	7169	False	NA	-4	True	AATAAA	-41	NA	7998799	7989544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525_7998606_7998764
ES.36591.18	chrX	-	4020	9	FSM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	368	-14	109	-7	multi-exon	FALSE	canonical	1	2	junction_8	12.8980376414399	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGACTTGGGCCTCT	7327	False	NA	-8	True	AATAAA	-37	NA	7998641	7989548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7998117_7998525
ES.36591.19	chrX	-	3779	9	FSM	ENSMUSG00000031166.14	ENSMUST00000133292.8	4197	9	333	85	-14	-64	multi-exon	FALSE	canonical	2	3	junction_8	12.5797456254091	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGTGACACTTTTGTC	7204	False	NA	-2	True	NA	NA	NA	7998764	7989626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997831_7998525
ES.36591.2	chrX	-	3740	11	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-15	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.9010066774027	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCCTCTCTTCATTT	6856	False	NA	0	True	AATAAA	-45	NA	7999112	7989540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525_7998606_7999008
ES.36591.20	chrX	-	3551	10	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	367	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.5693454872709	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGTGACACTTTTGTC	7585	False	NA	-2	True	NA	NA	NA	7998383	7989626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998302
ES.36591.22	chrX	-	3738	10	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-44	-64	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.7903168747557	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGTGACACTTTTGTC	7174	False	NA	-2	True	NA	NA	NA	7998794	7989626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991391_7991495_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
ES.36591.23	chrX	-	3917	11	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-3	-66	intron_retention	FALSE	non_canonical	0	0	junction_1	16.3661235483544	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGTGACACTTTTG	6903	False	NA	-4	True	NA	NA	NA	7999065	7989628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991697_7991787_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
ES.36591.24	chrX	-	3784	11	NNC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-37	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.3763434883004	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCTTGGTGACACTT	7181	False	NA	-7	True	NA	NA	NA	7998787	7989631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7996680_7996738_7997623_7997865_7998525
ES.36591.3	chrX	-	3795	10	NIC	ENSMUSG00000031166.14	novel	1749	10	NA	NA	-1	-1	combination_of_known_junctions	TRUE	canonical	3	9	junction_9	11.515957795625	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGCCTCTCTTCATTT	6905	False	NA	0	True	AATAAA	-45	NA	7999063	7989540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525_7998606_7999008
ES.36591.5	chrX	-	3687	9	NNC	ENSMUSG00000031166.14	novel	4183	9	NA	NA	420	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	13.2169398878863	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	7638	False	NA	-1	True	AATAAA	-44	NA	7998330	7989541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998302
ES.36591.6	chrX	-	5381	7	NIC	ENSMUSG00000031166.14	novel	4197	9	NA	NA	-51	0	intron_retention	FALSE	canonical	2	3	junction_6	14.2789666604026	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	7167	False	NA	-1	True	AATAAA	-44	NA	7998801	7989541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7996373_7996494_7996605_7997623_7997831_7998525
ES.36591.7	chrX	-	5430	8	NNC	ENSMUSG00000031166.14	novel	4197	9	NA	NA	11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	17.128565471225	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	6895	False	NA	-1	True	AATAAA	-44	NA	7999073	7989541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7995516_7996241_7996373_7996494_7996605_7997711
ES.36591.8	chrX	-	4500	8	NNC	ENSMUSG00000031166.14	novel	4183	9	NA	NA	361	0	intron_retention	FALSE	canonical	1	1	junction_7	13.9019892865176	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCCTCTCTTCATT	7579	False	NA	-1	True	AATAAA	-44	NA	7998389	7989541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998302
ES.36591.9	chrX	-	5619	8	NNC	ENSMUSG00000031166.14	novel	4374	9	NA	NA	-55	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	18.516401995451	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	7163	False	NA	-2	True	AATAAA	-43	NA	7998805	7989542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_7991383_7991486_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7994809_7996373_7996494_7996605_7997623
ES.36592.1	chrX	+	163	1	Intergenic	novelGene_29957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAAGTGCACTAC	NA	False	NA	NA	False	NA	NA	NA	8008052	8008215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8008100_8008200
ES.36593.1	chrX	+	868	3	FSM	ENSMUSG00000055188.13	ENSMUST00000124018.8	839	3	-33	4	-33	-4	multi-exon	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGCATGAAATATCTT	NA	False	NA	NA	False	AATACA	-10	NA	8011634	8014199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8011971_8012730_8012858_8013794
ES.36593.2	chrX	+	2681	3	NNC	ENSMUSG00000055188.13	novel	839	3	NA	NA	306	2070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	8012461	8016273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_8012537_8012730_8012858_8013794
ES.36594.1	chrX	-	4815	1	Genic_Genomic	ENSMUSG00000031167.17	novel	NA	NA	NA	NA	1737	2608	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTGGTGGTTTTTTTT	8405	False	NA	NA	False	NA	NA	NA	8007420	8002605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8002600_8007400
ES.36594.10	chrX	-	6063	3	NIC	ENSMUSG00000031167.17	novel	1274	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1172	junction_2	71.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGTTACACGTATG	6559	False	NA	-1	True	ATTAAA	-18	NA	8011938	8005214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8011312_8011876
ES.36594.11	chrX	-	2833	7	FSM	ENSMUSG00000031167.17	ENSMUST00000040010.10	2792	7	-40	-1	-14	1	multi-exon	FALSE	canonical	3	26	junction_1	443.550604653955	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6521	False	NA	-2	True	ATTAAA	-17	NA	8011976	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8007448_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.12	chrX	-	4606	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	-39	-3384	-3	1	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6496	False	NA	-2	True	ATTAAA	-17	NA	8012001	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.13	chrX	-	2940	8	NIC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	2	63	junction_1	380.838816406144	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6540	False	NA	-2	True	ATTAAA	-17	NA	8011957	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009065_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.14	chrX	-	2945	8	NNC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	555.932421381284	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6564	False	NA	-2	True	ATTAAA	-17	NA	8011933	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8007448_8009489_8009569_8009896_8009991_8010086_8010187_8010526_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.15	chrX	-	4987	7	NNC	ENSMUSG00000031167.17	novel	1055	7	NA	NA	2	1	intron_retention	FALSE	canonical	1	1	junction_3	538.177067102971	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6564	False	NA	-2	True	ATTAAA	-17	NA	8011933	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8009569_8009896_8009991_8010086_8010187_8010526_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.16	chrX	-	3220	8	NNC	ENSMUSG00000031167.17	novel	1319	8	NA	NA	4	1	intron_retention	FALSE	canonical	2	3	junction_1	557.959913708971	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6540	False	NA	-2	True	ATTAAA	-17	NA	8011957	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8005456_8007359_8009569_8009896_8009991_8010086_8010187_8010413_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.19	chrX	-	891	8	NNC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	505.993062790229	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGTGTTACACGTAT	6559	False	NA	-2	True	ATTAAA	-17	NA	8011938	8005215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8005456_8007359_8007448_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.2	chrX	-	5900	6	NIC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	-3	1001	intron_retention	FALSE	canonical	3	764	junction_1	193.394312222464	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATAACTGGTCATTCTT	6496	False	NA	NA	False	ATTAAA	-31	NA	8012001	8004212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.21	chrX	-	5354	6	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	3	0	intron_retention	FALSE	canonical	2	12	junction_3	489.083469358759	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6539	False	NA	-3	True	ATTAAA	-16	NA	8011958	8005216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009572_8009896_8009991_8010086_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.22	chrX	-	3327	7	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	-14	0	intron_retention	FALSE	canonical	2	12	junction_4	532.579388969903	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6521	False	NA	-3	True	ATTAAA	-16	NA	8011976	8005216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009489_8009569_8009896_8009991_8010086_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.24	chrX	-	4700	8	NNC	ENSMUSG00000031167.17	novel	1319	8	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_4	512.235835353608	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6559	False	NA	-3	True	ATTAAA	-16	NA	8011938	8005216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010526_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.27	chrX	-	3413	8	NIC	ENSMUSG00000031167.17	novel	1319	8	NA	NA	1	-8	intron_retention	FALSE	canonical	2	12	junction_5	502.64411071932	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTTTCATGTGTGT	6563	False	NA	-11	True	ATTAAA	-8	NA	8011934	8005224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009065_8009195_8009485_8009572_8009896_8009991_8010086_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.3	chrX	-	7060	3	NIC	ENSMUSG00000031167.17	novel	1274	6	NA	NA	2	1001	intron_retention	FALSE	canonical	3	1172	junction_2	71.5	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATAACTGGTCATTCTT	6564	False	NA	NA	False	ATTAAA	-31	NA	8011933	8004212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8011312_8011876
ES.36594.30	chrX	-	1223	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	113	2	6	0	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	6491	False	NA	-9	True	ATTAAA	-23	NA	8012006	8008599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.32	chrX	-	2571	1	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	748	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	7327	False	NA	-9	True	ATTAAA	-23	NA	8011170	8008599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8008600_8011200
ES.36594.34	chrX	-	1445	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115619.8	969	7	-15	1577	2	0	5prime_fragment	FALSE	canonical	3	764	junction_1	193.394312222464	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	6564	False	NA	-9	True	ATTAAA	-23	NA	8011933	8008599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.37	chrX	-	1771	5	NIC	ENSMUSG00000031167.17	novel	1183	7	NA	NA	2	-2	intron_retention	FALSE	canonical	3	925	junction_2	139.71220419133	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATAATGCTTTT	6564	False	NA	-11	True	ATTAAA	-21	NA	8011933	8008601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.38	chrX	-	2107	6	NIC	ENSMUSG00000031167.17	novel	1055	7	NA	NA	-3	2	intron_retention	FALSE	canonical	2	11	junction_2	586.872047383414	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATACTGATAATGCT	6496	False	NA	-14	True	ATTAAA	-18	NA	8012001	8008604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8010187_8010413_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.39	chrX	-	1120	7	NNC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	429.57941317319	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATACTGATAATGCT	6559	False	NA	-14	True	ATTAAA	-18	NA	8011938	8008604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8009195_8009489_8009569_8009926_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.4	chrX	-	3920	8	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	0	999	combination_of_known_junctions	FALSE	canonical	2	63	junction_1	380.838816406144	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGATAACTGGTCATTC	6561	False	NA	NA	False	ATTAAA	-29	NA	8011936	8004214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009065_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.42	chrX	-	1707	7	NIC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	1	2	intron_retention	FALSE	canonical	2	12	junction_4	428.038160292592	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATACTGATAATGCT	6500	False	NA	-14	True	ATTAAA	-18	NA	8011997	8008604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.43	chrX	-	2736	3	NIC	ENSMUSG00000031167.17	novel	1274	6	NA	NA	-3	2	intron_retention	FALSE	canonical	3	1172	junction_2	71.5	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATACTGATAATGCT	6496	False	NA	-14	True	ATTAAA	-18	NA	8012001	8008604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8011312_8011876
ES.36594.44	chrX	-	1840	6	NIC	ENSMUSG00000031167.17	novel	1183	7	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	391	junction_1	334.202692987355	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAATCAATACTGATAAT	6495	False	NA	-17	True	ATTAAA	-15	NA	8012002	8008607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010919_8011193_8011312_8011876
ES.36594.45	chrX	-	2051	5	NIC	ENSMUSG00000031167.17	novel	1183	7	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	391	junction_1	361.712938668221	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAAATCAATACTGATA	6557	False	NA	-19	True	ATTAAA	-13	NA	8011940	8008609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8011312_8011876
ES.36594.48	chrX	-	1726	6	FSM	ENSMUSG00000031167.17	ENSMUST00000141925.8	1274	6	-37	-415	0	-3	multi-exon	FALSE	canonical	3	764	junction_2	204.799804687407	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTGTGAATGTCAT	6499	False	NA	NA	False	ATTAAA	-35	NA	8011998	8008713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010919_8011193_8011312_8011876
ES.36594.5	chrX	-	3785	7	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	1	995	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	423.594145379749	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTGATAACTGGTC	6563	False	NA	NA	False	ATTAAA	-25	NA	8011934	8004218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.51	chrX	-	1096	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	10	119	-4	-15	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTTCTTTAAAATGTT	6495	False	NA	NA	False	ATTAAA	-23	NA	8012002	8008725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.53	chrX	-	2423	1	Genic_Genomic	ENSMUSG00000031167.17	novel	NA	NA	NA	NA	-1887	-871	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCAATGCTGCTGTAG	4491	False	NA	NA	False	NA	NA	NA	8014006	8011583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8011600_8014000
ES.36594.6	chrX	-	6160	5	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	-4	994	intron_retention	FALSE	canonical	3	925	junction_2	139.71220419133	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCGAATGTGATAACTGGT	6557	False	NA	NA	False	ATTAAA	-24	NA	8011940	8004219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.7	chrX	-	6317	6	NIC	ENSMUSG00000031167.17	novel	1055	7	NA	NA	2	988	intron_retention	FALSE	canonical	2	12	junction_3	468.809385571577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACACTCGAATGTGATA	6564	False	NA	NA	False	ATTAAA	-18	NA	8011933	8004225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009569_8009896_8009991_8010086_8010685_8010811_8010919_8011193_8011312_8011876
ES.36594.8	chrX	-	4834	6	NIC	ENSMUSG00000031167.17	novel	2792	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	764	junction_1	193.394312222464	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTTACACGTATGT	6561	False	NA	0	True	ATTAAA	-19	NA	8011936	8005213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ES.36594.9	chrX	-	3189	9	NIC	ENSMUSG00000031167.17	novel	1319	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	518.289976750467	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTTACACGTATGT	6564	False	NA	0	True	ATTAAA	-19	NA	8011933	8005213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8007448_8009065_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010413_8010685_8010811_8010919_8011193_8011312_8011876
ES.36595.1	chrX	+	178	1	Intergenic	novelGene_29958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	8018496	8018674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8018500_8018700
ES.36596.1	chrX	-	3978	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	279	-1609	-11	1609	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	8042141	8019101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.11	chrX	-	2365	5	FSM	ENSMUSG00000039201.11	ENSMUST00000133093.2	2560	5	197	-2	130	2	multi-exon	FALSE	canonical	3	121	junction_3	12.051970793194	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTATGTGTATTT	NA	False	NA	-16	True	NA	NA	NA	8042000	8020719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.12	chrX	-	2450	6	NNC	ENSMUSG00000039201.11	novel	2648	6	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.394773281197	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGGTATGTGTATTT	NA	False	NA	-16	True	NA	NA	NA	8042163	8020719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8022306_8022486_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.13	chrX	-	3657	5	NIC	ENSMUSG00000039201.11	novel	2648	6	NA	NA	-1	1	intron_retention	FALSE	canonical	3	134	junction_1	6.57171971404746	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGGTATGTGTATT	NA	False	NA	-17	True	NA	NA	NA	8042131	8020720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8040550_8041949
ES.36596.14	chrX	-	3779	4	NNC	ENSMUSG00000039201.11	novel	2560	5	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_2	66.4446302487183	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGTGGTATGTGTAT	NA	False	NA	-18	True	NA	NA	NA	8042140	8020721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8022306_8022554_8022982_8038972_8040550_8041949
ES.36596.15	chrX	-	2247	5	FSM	ENSMUSG00000039201.11	ENSMUST00000143984.2	2184	5	-58	-5	9	-3	multi-exon	FALSE	canonical	3	5	junction_3	59.3738157776641	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCACTGTGGTATGTG	NA	False	NA	-21	True	NA	NA	NA	8042188	8020724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8040439_8040550_8041949
ES.36596.17	chrX	-	2373	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	257	18	-33	1	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAAGGTCACTGTGGTA	NA	False	NA	-25	True	NA	NA	NA	8042163	8020728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.18	chrX	-	160	1	Intergenic	novelGene_29959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAATAAGTAAAAAAAA	7495	False	NA	NA	False	NA	NA	NA	8031517	8031357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8031400_8031500
ES.36596.2	chrX	-	3832	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	289	-1473	-1	1473	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGAGTTTTGTTTTGAG	NA	False	NA	NA	False	AATGAA	-25	NA	8042131	8019237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.3	chrX	-	3161	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	248	-761	25	761	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACATGCACTCAGTTC	NA	False	NA	NA	False	NA	NA	NA	8042172	8019949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.4	chrX	-	2620	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	316	-288	26	288	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATCAAGCAG	NA	False	NA	NA	False	AATATA	-4	NA	8042104	8020422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.5	chrX	-	2802	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	-70	-84	-70	84	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGGTTCCTGCTTTCTC	NA	False	NA	77	True	GGGGCT	-37	NA	8042490	8020626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ES.36596.6	chrX	-	2266	5	NNC	ENSMUSG00000039201.11	novel	2648	6	NA	NA	8275	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	65.4064217030713	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	5157	False	NA	-7	True	NA	NA	NA	8033855	8020710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8022306_8022554_8022744_8022889_8023018_8033429_8033630_8033701
ES.36596.8	chrX	-	3847	4	NIC	ENSMUSG00000039201.11	novel	2560	5	NA	NA	30	-2	intron_retention	FALSE	canonical	3	134	junction_1	7.58653778449403	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGTATTTCTCTATT	NA	False	NA	-9	True	NA	NA	NA	8042167	8020712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8022306_8022554_8023018_8038976_8040550_8041949
ES.36596.9	chrX	-	2235	5	NNC	ENSMUSG00000039201.11	novel	2184	5	NA	NA	8293	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	65.4064217030713	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTATGTGTATTTCT	5175	False	NA	-14	True	NA	NA	NA	8033837	8020717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8022306_8022554_8022744_8022889_8023018_8033429_8033624_8033701
ES.36597.1	chrX	-	172	1	Intergenic	novelGene_29960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	8046982	8046810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8046800_8047000
ES.36598.1	chrX	-	5846	3	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	-15	1435	intron_retention	FALSE	canonical	3	793	junction_2	2	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCTAGAAGGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	8059152	8050132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8052073_8052882_8056676_8059039
ES.36598.2	chrX	-	2603	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	34	1400	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8059103	8050167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
ES.36598.3	chrX	-	1131	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	610	2	-4	0	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059141	8051569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ES.36598.4	chrX	-	3304	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_2	374.770151781951	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGAGAGATATTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	8059137	8051571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8052073_8052882_8054307_8055394_8056676_8059039
ES.36598.5	chrX	-	1206	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	27	-2	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGAGAGATATTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	8059110	8051571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
ES.36598.8	chrX	-	819	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	641	283	27	-281	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCCGGAGAGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	8059110	8051850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ES.36599.1	chrX	-	1980	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	13	-154	3	152	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTCTGTGATTGGCT	2001	False	NA	NA	False	AATAAA	-26	NA	8072727	8059934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ES.36599.10	chrX	-	1807	14	FSM	ENSMUSG00000031169.14	ENSMUST00000089403.10	1854	14	45	2	35	1	multi-exon	FALSE	canonical	0	0	junction_7	24.4748391512445	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTCGGTTTTTTGGT	2033	False	NA	-4	True	AATAAA	-15	NA	8072695	8060090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8067896_8067912_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ES.36599.12	chrX	-	189	1	Intergenic	novelGene_29961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCAGATTGAGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	8062247	8062058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8062100_8062200
ES.36599.2	chrX	-	1844	13	NNC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.2476549798208	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCGGTTTTTTGGTTTT	1998	False	NA	-1	True	AATAAA	-18	NA	8072730	8060087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067811_8069385_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ES.36599.3	chrX	-	3974	10	NIC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	46	0	intron_retention	FALSE	canonical	3	57	junction_2	7.16645133182093	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCGGTTTTTTGGTTTT	2044	False	NA	-1	True	AATAAA	-18	NA	8072684	8060087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8069529_8069607_8070628_8071803_8071973_8072613
ES.36599.4	chrX	-	1276	9	NIC	ENSMUSG00000031169.14	novel	1324	10	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	23.4240794909853	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGTTTTTTGGTT	2000	False	NA	-3	True	AATAAA	-16	NA	8072728	8060089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8071803_8071973_8072613
ES.36599.5	chrX	-	1817	13	NNC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.9280910264349	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGTTTTTTGGTT	2009	False	NA	-3	True	AATAAA	-16	NA	8072719	8060089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069387_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072623
ES.36599.6	chrX	-	4591	10	NNC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	-324	-1	intron_retention	FALSE	canonical	0	0	junction_9	21.7511174681006	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGTTTTTTGGTT	1640	False	NA	-3	True	AATAAA	-16	NA	8073088	8060089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8060517_8064213_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8069529_8069607_8070075_8070434_8070628_8071803_8071868_8072914
ES.36599.7	chrX	-	1892	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	-54	1	-30	-1	multi-exon	FALSE	canonical	3	57	junction_2	6.61857655055493	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGTTTTTTGGTT	1934	False	NA	-3	True	AATAAA	-16	NA	8072794	8060089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ES.36599.8	chrX	-	1764	14	NNC	ENSMUSG00000031169.14	novel	1883	14	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.4926020711242	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTCGGTTTTTTGGT	2000	False	NA	-4	True	AATAAA	-15	NA	8072728	8060090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071879_8071939_8071973_8072613
ES.36599.9	chrX	-	3244	13	NNC	ENSMUSG00000031169.14	novel	1839	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	18.8038116703325	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGGCTCGGTTTTTTGGT	1998	False	NA	-4	True	AATAAA	-15	NA	8072730	8060090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8065997_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ES.366.1	chr1	+	1260	8	ISM	ENSMUSG00000026073.14	ENSMUST00000027243.13	1419	9	17716	12	16429	0	3prime_fragment	FALSE	canonical	1	2	junction_5	1.35526185435788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATACGAGAGTGACCC	NA	False	NA	NA	False	AATAAA	-8	NA	40141573	40164379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_40141698_40144423_40144683_40151114_40151296_40154183_40154359_40157114_40157178_40160068_40160205_40162281_40162425_40164200
ES.3660.1	chr10	+	182	1	Intergenic	novelGene_2799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	96137306	96137488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_96137300_96137500
ES.36600.1	chrX	+	129	1	Intergenic	novelGene_29963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8087124	8087253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8087100_8087300
ES.36601.1	chrX	+	4131	1	Intergenic	novelGene_29966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCCCGTGGTCGGGCTG	NA	False	NA	NA	False	NA	NA	NA	8092955	8097086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8093000_8097100
ES.36602.1	chrX	+	504	1	Intergenic	novelGene_29967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGGGGGGTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	8097100	8097604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8097100_8097600
ES.36603.1	chrX	+	217	1	Intergenic	novelGene_29968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTCTTTTACAGTT	NA	False	NA	NA	False	TTTAAA	-16	NA	8107226	8107443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8107200_8107400
ES.36604.1	chrX	-	2114	15	NNC	ENSMUSG00000031171.12	novel	1791	9	NA	NA	-4	29645	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	122.712310810651	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGGAAGGAGTGTCAGG	NA	False	NA	NA	False	NA	NA	NA	8118606	8075261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8075280_8101625_8102324_8102541_8102723_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.10	chrX	-	1849	14	NNC	ENSMUSG00000031171.12	novel	3425	13	NA	NA	-293	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	101.78821266083	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118938	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410_8118752_8118867
ES.36604.11	chrX	-	1638	14	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	108.781796684651	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118577	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8114445_8114486_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.13	chrX	-	1647	13	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	84.9615926299774	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATGCACGTTGCTTAC	NA	False	NA	-16	True	AATAAA	-19	NA	8118636	8106660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112650_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.14	chrX	-	1605	13	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	84.1996634989317	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATGCACGTTGCTTAC	NA	False	NA	-16	True	AATAAA	-19	NA	8118620	8106660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117153_8117277_8118410
ES.36604.16	chrX	-	1446	13	NNC	ENSMUSG00000031171.12	novel	1791	9	NA	NA	6	1655	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.330003903077	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACCGGCTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	8118628	8109202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8109404_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.17	chrX	-	174	1	Intergenic	novelGene_29969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAGAGACAGTTGAT	NA	False	NA	NA	False	NA	NA	NA	8114706	8114532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8114500_8114700
ES.36604.18	chrX	-	1016	5	FSM	ENSMUSG00000031171.12	ENSMUST00000147467.2	1047	5	33	-2	-20	2	multi-exon	FALSE	canonical	3	296	junction_2	13.7386316640341	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGTCAATGTTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	8118569	8114758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.2	chrX	-	157	1	Intergenic	novelGene_29962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8365	False	NA	NA	False	NA	NA	NA	8082103	8081946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8081900_8082100
ES.36604.3	chrX	-	299	1	Intergenic	novelGene_29964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTTTGTTTCCGA	NA	False	NA	NA	False	AATAAA	-6	NA	8092569	8092270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8092300_8092600
ES.36604.4	chrX	-	177	1	Intergenic	novelGene_29965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGCAAGCGGGGCCC	NA	False	NA	NA	False	NA	NA	NA	8092568	8092391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8092400_8092600
ES.36604.5	chrX	-	3692	13	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	4	293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	82.6271326838561	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTTGTTGTTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	8118630	8104613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117272_8118410
ES.36604.6	chrX	-	3081	11	NIC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	5	-1	intron_retention	FALSE	canonical	3	233	junction_4	24.6365582011774	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118640	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8116878_8117118_8117277_8118410
ES.36604.7	chrX	-	1954	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	-299	1	-288	-1	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118933	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.8	chrX	-	1545	12	NIC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	87.0699348438886	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118608	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ES.36604.9	chrX	-	1597	13	NNC	ENSMUSG00000031171.12	novel	1656	13	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.6683070707229	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCACGTTGCTTACT	NA	False	NA	-15	True	AATAAA	-20	NA	8118596	8106659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116827_8116878_8117118_8117277_8118410
ES.36605.1	chrX	+	202	1	Intergenic	novelGene_29970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTAGGGTCTTCCTATAT	NA	False	NA	9	True	NA	NA	NA	8121511	8121713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8121500_8121700
ES.36606.1	chrX	+	1850	16	FSM	ENSMUSG00000031170.15	ENSMUST00000033512.11	1868	16	13	5	13	0	multi-exon	FALSE	canonical	1	1	junction_9	2.63818119165458	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCTGGTCTGAGCCGT	5426	False	NA	NA	False	AATAAA	-12	NA	8137632	8146413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8137745_8138125_8138183_8138269_8138349_8138890_8139007_8139113_8139188_8139825_8139919_8140036_8140116_8142358_8142442_8142817_8142877_8142978_8143108_8143259_8143340_8143931_8144033_8144267_8144384_8145096_8145242_8145331_8145436_8145990
ES.36607.1	chrX	-	176	1	Intergenic	novelGene_29971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8153465	8153289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8153300_8153500
ES.36608.1	chrX	-	181	1	Intergenic	novelGene_29972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATGTAGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	8155771	8155590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_8155600_8155800
ES.36609.1	chrX	+	868	8	Fusion	ENSMUSG00000079699.3_ENSMUSG00000079697.2	novel	444	5	NA	NA	-42852	581	multi-exon	FALSE	canonical	0	0	junction_1	1.98976975388345	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGTGTCACATGTTTG	NA	False	NA	NA	False	ACTAAA	-11	NA	8667380	8747570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_8667501_8710175_8710302_8740491_8740607_8740905_8740996_8741470_8741521_8742125_8742202_8746876_8746994_8747396
ES.36609.2	chrX	+	3390	1	Intergenic	novelGene_29973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTTGGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	8719081	8722471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8719100_8722500
ES.36609.3	chrX	+	4858	8	NNC	ENSMUSG00000079697.2	novel	444	5	NA	NA	-7214	580	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.8070158058105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGTGTCACATGTTT	NA	False	NA	NA	False	ACTAAA	-10	NA	8733277	8747569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_8737181_8737814_8737928_8740270_8740607_8740905_8740996_8741470_8741521_8742125_8742202_8746876_8746994_8747396
ES.3661.1	chr10	-	153	1	Intergenic	novelGene_2800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9875	False	NA	NA	False	NA	NA	NA	96153548	96153395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_96153400_96153500
ES.36610.1	chrX	+	2591	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	-22	14	-22	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTTCCCCATTTCGT	NA	False	NA	NA	False	AATACA	-11	NA	8758598	8761189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8758600_8761200
ES.36610.2	chrX	+	2318	2	Genic_Genomic	ENSMUSG00000052364.5	novel	2583	1	NA	NA	5	-22	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACTAAATAAGTTCCC	NA	False	NA	NA	False	AATACA	-3	NA	8758625	8761181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_8759415_8759652
ES.36611.1	chrX	+	2627	1	Intergenic	novelGene_29974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAATTTCACAGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	8819333	8821960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8819300_8822000
ES.36612.1	chrX	-	4711	1	FSM	ENSMUSG00000078208.2	ENSMUST00000105006.2	842	1	-33	-3836	-33	3836	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTCTAGGCAGCCTA	NA	False	NA	NA	False	TATAAA	-17	NA	8829247	8824536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8824500_8829200
ES.36612.2	chrX	-	4218	2	Genic_Genomic	ENSMUSG00000078208.2	novel	842	1	NA	NA	-16	3396	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGGTCTCCTAACTCTA	NA	False	NA	NA	False	NA	NA	NA	8829230	8824976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8827428_8827463
ES.36612.3	chrX	-	862	2	Genic_Genomic	ENSMUSG00000060685.5_ENSMUSG00000078208.2	novel	850	1	NA	NA	-29	-9	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAAGTATCAAGTTG	NA	False	NA	NA	False	AATAAA	-22	NA	8842827	8828381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8828391_8841974
ES.36612.4	chrX	-	400	2	Genic_Genomic	ENSMUSG00000060685.5_ENSMUSG00000078208.2	novel	850	1	NA	NA	433	-9	multi-exon	TRUE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAAGTATCAAGTTG	NA	False	NA	NA	False	AATAAA	-22	NA	8842365	8828381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8828408_8841991
ES.36612.6	chrX	-	876	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	-36	10	-36	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATAAAATTGATGTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	8842834	8841958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8842000_8842800
ES.36612.7	chrX	-	782	2	Genic_Genomic	ENSMUSG00000060685.5	novel	850	1	NA	NA	-36	-17	multi-exon	FALSE	canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTGAAGTATAAAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	8842834	8841965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_8842667_8842753
ES.36613.1	chrX	-	913	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	-66	9	-66	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAAGTATCAAGTTG	NA	False	NA	NA	False	AATAAA	-22	NA	8853060	8852147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_8852100_8853100
ES.36614.1	chrX	+	437	1	FSM	ENSMUSG00000071815.7	ENSMUST00000096509.7	841	1	395	9	395	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAAGTATCAAGTTG	7077	False	NA	22	True	AATAAA	-22	NA	8900126	8900563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8900100_8900600
ES.36615.1	chrX	+	912	2	Genic_Genomic	ENSMUSG00000072249.4	novel	847	1	NA	NA	-19515	-9	multi-exon	TRUE	canonical	3	217	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGAAGTATCAAATTG	NA	False	NA	21	True	AATAAA	-21	NA	8909738	8930091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_8909865_8929305
ES.36615.2	chrX	+	2585	1	Intergenic	novelGene_29975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8916361	8918946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_8916400_8918900
ES.36615.3	chrX	+	894	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	-59	12	-59	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAATTGAAGTATCAAA	NA	False	NA	18	True	AATAAA	-18	NA	8929194	8930088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8929200_8930100
ES.36615.4	chrX	+	837	2	Genic_Genomic	ENSMUSG00000072249.4_ENSMUSG00000083123.2	novel	847	1	NA	NA	0	157	multi-exon	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATTGAAGTATAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	8929253	8946967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_8929913_8946789
ES.36615.5	chrX	+	901	1	FSM	ENSMUSG00000083123.2	ENSMUST00000122268.2	528	1	-216	-157	-216	157	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATTGAAGTATAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	8946066	8946967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_8946100_8947000
ES.36616.1	chrX	-	736	1	Intergenic	novelGene_29976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	9085318	9084582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_9084600_9085300
ES.36617.1	chrX	+	1004	3	NNC	ENSMUSG00000015342.7	novel	5076	3	NA	NA	-160	31151	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	26	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTCTGAGTCTGTGTT	NA	False	NA	NA	False	GATAAA	-17	NA	9138834	9210640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_9139474_9148235_9148580_9210619
ES.36617.2	chrX	+	5214	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	-138	0	-138	0	multi-exon	FALSE	canonical	3	33	junction_2	9.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCATTTTATTTCTTGT	NA	False	NA	9	True	AATAAA	-19	NA	9138856	9179489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_9139474_9148235_9148499_9175155
ES.36617.3	chrX	+	5218	4	NNC	ENSMUSG00000015342.7	novel	5076	3	NA	NA	-134	21917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.483844059096	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTATGCAAAGGATCCAT	NA	False	NA	NA	False	AAAAAG	-5	NA	9138860	9201406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_9139474_9148235_9148499_9175155_9179480_9201388
ES.36617.4	chrX	+	5798	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	-123	-599	-123	599	multi-exon	FALSE	canonical	3	33	junction_2	9.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATGTTAAATGTGTAC	NA	False	NA	NA	False	NA	NA	NA	9138871	9180088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_9139474_9148235_9148499_9175155
ES.36617.5	chrX	+	4941	4	NNC	ENSMUSG00000015342.7	novel	5076	3	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.483844059096	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTTGCATTTTATTT	NA	False	NA	4	True	AATAAA	-14	NA	9139016	9179484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_9139178_9139285_9139474_9148235_9148499_9175155
ES.36617.6	chrX	+	4920	4	NNC	ENSMUSG00000015342.7	novel	5076	3	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.483844059096	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCATTTTATTTCTTG	NA	False	NA	8	True	AATAAA	-18	NA	9139036	9179488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_9139171_9139283_9139474_9148235_9148499_9175155
ES.36617.7	chrX	+	695	2	ISM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	148	30890	148	-30890	5prime_fragment	FALSE	canonical	3	52	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCTGAGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	9139142	9148599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_9139474_9148235
ES.36618.1	chrX	-	189	1	Intergenic	novelGene_29977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAAGAGATACATT	NA	False	NA	NA	False	NA	NA	NA	9143719	9143530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_9143500_9143700
ES.36619.1	chrX	-	1128	2	Intergenic	novelGene_29978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGGTGGTTGCGTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	9198865	9195214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_9196165_9198687
ES.36619.2	chrX	-	3641	1	Intergenic	novelGene_29979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACCGGTGGTTGCG	NA	False	NA	NA	False	NA	NA	NA	9198862	9195221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_9195200_9198900
ES.3662.1	chr10	-	175	1	Intergenic	novelGene_2801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAAATAAATTTTTTT	1596	False	NA	NA	False	NA	NA	NA	96372623	96372448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_96372400_96372600
ES.36620.1	chrX	+	2410	1	Intergenic	novelGene_29980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAAGGCTCCCTAGGAGG	NA	False	NA	NA	False	NA	NA	NA	9325279	9327689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_9325300_9327700
ES.36621.1	chrX	+	3141	5	Antisense	novelGene_ENSMUSG00000118573.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTGTGTCGTTGCTCTT	268	False	NA	NA	False	NA	NA	NA	9350902	9470331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_9351994_9398083_9398132_9418936_9419026_9463511_9463639_9468545
ES.36621.2	chrX	+	1912	1	Intergenic	novelGene_29981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAACACTATAGATAA	9962	False	NA	NA	False	NA	NA	NA	9360596	9362508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_9360600_9362500
ES.36622.1	chrX	-	5038	14	NIC	ENSMUSG00000015340.11	novel	4752	13	NA	NA	-251	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	1.59139698965978	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGCCTACTACTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	9354261	9301492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_9304583_9306133_9306259_9308771_9308919_9310786_9310950_9312931_9313186_9315879_9315973_9316920_9317051_9319824_9320016_9321372_9321519_9323198_9323284_9331882_9331994_9333321_9333418_9335444_9335544_9353953
ES.36622.2	chrX	-	4857	14	NIC	ENSMUSG00000015340.11	novel	4752	13	NA	NA	-246	-178	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	1.59139698965978	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTATTTTATCAAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	9354256	9301668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_9304583_9306133_9306259_9308771_9308919_9310786_9310950_9312931_9313186_9315879_9315973_9316920_9317051_9319824_9320016_9321372_9321519_9323198_9323284_9331882_9331994_9333321_9333418_9335444_9335544_9353953
ES.36622.3	chrX	-	4151	16	NNC	ENSMUSG00000015340.11	novel	4752	13	NA	NA	-289	-243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.88561808316413	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGAGCTTTCCCTGTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	9354299	9301733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_9303162_9303956_9304583_9306133_9306259_9308771_9308919_9310786_9310950_9312931_9313186_9315879_9315973_9316920_9317051_9319824_9320016_9321372_9321519_9323198_9323284_9331882_9331994_9333321_9333418_9335444_9335544_9336507_9336619_9353953
ES.36622.4	chrX	-	4517	13	NNC	ENSMUSG00000015340.11	novel	4752	13	NA	NA	-6898	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1.83143841465299	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCAGTGAGCTTTCCC	NA	False	NA	NA	False	ATTAAA	-15	NA	9342461	9301738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_9304583_9306133_9306259_9308771_9308919_9310786_9310950_9312931_9313186_9315879_9315973_9316920_9317051_9319824_9320016_9321372_9321519_9323198_9323284_9331882_9331994_9333321_9333418_9342329
ES.36623.1	chrX	-	6524	3	NIC	ENSMUSG00000031176.9	novel	2176	5	NA	NA	50	0	intron_retention	FALSE	canonical	3	232	junction_2	35.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9529192	9520505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_9522303_9522618_9527261_9529107
ES.36623.2	chrX	-	7756	3	ISM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	82	0	82	0	intron_retention	FALSE	canonical	3	289	junction_2	7	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9529160	9520505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_9522303_9522618_9522697_9523279
ES.36623.3	chrX	-	2136	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	38	2	38	-2	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTCTGGTTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	9529204	9520507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ES.36623.4	chrX	-	2020	4	NIC	ENSMUSG00000031176.9	novel	2176	5	NA	NA	30	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	129.389163207571	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTCTGGTTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	9529212	9520507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_9522303_9522618_9522697_9527218_9527261_9529107
ES.36623.6	chrX	-	433	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	59	1684	59	58	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTTAAGTTTGTGAGT	NA	False	NA	NA	False	ACTAAA	-21	NA	9529183	9522189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ES.36624.1	chrX	-	2748	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	178	0	-9	0	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCTTGGAAGTATTT	NA	False	NA	0	True	AATAAA	-32	NA	10082981	10024454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.11	chrX	-	2647	17	NNC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	30.6236606849998	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082958	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068330_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.12	chrX	-	2716	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	173	-150	11	-6	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGTGCTTGGAA	NA	False	NA	-6	True	AATAAA	-26	NA	10082986	10024460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.14	chrX	-	2844	18	NNC	ENSMUSG00000031174.18	novel	2739	17	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.3554278088242	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATATGTGCTTGGA	NA	False	NA	-7	True	AATAAA	-25	NA	10082935	10024461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10050140_10050321_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.15	chrX	-	2605	16	NIC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	36	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	31.1422542536664	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGGATATGTGCTTG	NA	False	NA	-9	True	AATAAA	-23	NA	10082936	10024463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_10025120_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.17	chrX	-	1568	10	ISM	ENSMUSG00000031174.18	ENSMUST00000155734.8	2672	12	59	14798	34	11235	5prime_fragment	FALSE	canonical	3	91	junction_1	9.6148034012373	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCTTTGTTTATAGAT	NA	False	NA	NA	False	ATTAAA	-21	NA	10082938	10062004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.18	chrX	-	1427	10	NNC	ENSMUSG00000031174.18	novel	2672	12	NA	NA	40	11232	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	35.4247594239808	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATAGCCTTTGTTTATA	NA	False	NA	NA	False	ATTAAA	-18	NA	10082932	10062007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10062394_10065149_10065275_10068248_10068273_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.19	chrX	-	1798	7	NNC	ENSMUSG00000031174.18	novel	2672	12	NA	NA	5	1606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.7159708291947	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTTATTAGATAT	NA	False	NA	NA	False	NA	NA	NA	10082687	10071633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082367
ES.36624.2	chrX	-	2527	16	NIC	ENSMUSG00000031174.18	novel	2739	17	NA	NA	52	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	34.6746144735437	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082920	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10082790
ES.36624.3	chrX	-	8532	15	NIC	ENSMUSG00000031174.18	novel	2795	17	NA	NA	12	-3	intron_retention	FALSE	canonical	0	0	junction_14	31.8308668061781	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082680	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082454
ES.36624.4	chrX	-	2677	17	NNC	ENSMUSG00000031174.18	novel	2739	17	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	32.1859829739593	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082968	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025089_10028840_10028930_10030984_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.5	chrX	-	2674	17	NNC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5550220913028	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082951	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025120_10028881_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.6	chrX	-	2682	17	NNC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	28.8693176226942	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082942	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025120_10028840_10028930_10030984_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.7	chrX	-	2565	16	NIC	ENSMUSG00000031174.18	novel	2926	17	NA	NA	15	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	31.060085139756	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082957	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.8	chrX	-	2612	16	NNC	ENSMUSG00000031174.18	novel	2739	17	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.3427107465778	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082970	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_10025089_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061221_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36624.9	chrX	-	3547	18	NIC	ENSMUSG00000031174.18	novel	3805	18	NA	NA	37	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	40.3554278088242	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGTGCTTGGAAGTA	NA	False	NA	-3	True	AATAAA	-29	NA	10082935	10024457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10042241_10043121_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ES.36625.1	chrX	-	181	1	Intergenic	novelGene_29982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAAAGCCTTT	NA	False	NA	NA	False	NA	NA	NA	10231995	10231814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_10231800_10232000
ES.36626.1	chrX	+	1769	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	-37	1	-37	-1	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGGTTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	10351359	10462843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ES.36626.2	chrX	+	1894	9	NNC	ENSMUSG00000058254.13	novel	1733	8	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.5550334122633	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGTGGTTTTCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	10351378	10462842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_10351478_10383530_10383676_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ES.36627.1	chrX	+	239	1	Intergenic	novelGene_29983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAAATGACCTAGCTC	NA	False	NA	NA	False	AGTAAA	-7	NA	10568847	10569086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_10568800_10569100
ES.36628.1	chrX	+	4688	1	Genic_Genomic	ENSMUSG00000008035.13	novel	NA	NA	NA	NA	1	11	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGTGTGTTGCTCTTT	NA	False	NA	NA	False	AATAAA	-26	NA	10581252	10585940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_10581300_10585900
ES.36628.2	chrX	+	1761	2	FSM	ENSMUSG00000008035.13	ENSMUST00000144356.8	447	2	-5	-1309	1	3	multi-exon	FALSE	canonical	3	13	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	10581252	10585932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_10581307_10584225
ES.36628.3	chrX	+	1823	3	NNC	ENSMUSG00000008035.13	novel	447	2	NA	NA	27	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGACAAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	10581284	10585932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_10581307_10581650_10581742_10584222
ES.36628.4	chrX	+	1991	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	41	-13	-37	13	multi-exon	FALSE	canonical	3	265	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGTTGCTCTTTAA	1520	False	NA	NA	False	AATAAA	-28	NA	10583669	10585942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_10583944_10584225
ES.36629.1	chrX	+	1113	3	Intergenic	novelGene_29984	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAATAGTTTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	10832059	10878670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_10832355_10839127_10839165_10877889
ES.3663.1	chr10	-	175	1	Intergenic	novelGene_2802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAACTTAAATC	1915	False	NA	NA	False	NA	NA	NA	96389792	96389617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_96389600_96389800
ES.36630.1	chrX	-	170	1	FSM	ENSMUSG00000080811.2	ENSMUST00000117403.2	123	1	25	-72	25	72	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTCCTTTATTA	NA	False	NA	NA	False	AATAAA	-14	NA	11550338	11550168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11550200_11550300
ES.36631.1	chrX	+	332	1	Intergenic	novelGene_29986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACACACT	NA	False	NA	NA	False	NA	NA	NA	11983307	11983639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_11983300_11983600
ES.36631.2	chrX	+	181	1	Intergenic	novelGene_29985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCAAGCAGAGTT	NA	False	NA	NA	False	NA	NA	NA	11983307	11983488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_11983300_11983500
ES.36632.1	chrX	-	6914	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	-67	-8	-67	8	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTGCATCCTTTGTAT	NA	False	NA	2	True	AATAAA	-27	NA	11946859	11902970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.10	chrX	-	6818	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	-35	2	-35	1	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11946827	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.11	chrX	-	6161	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	49.2654720336046	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11946824	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946764
ES.36632.12	chrX	-	7162	15	NNC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	1604	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	51.0719780190224	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11945188	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11944229
ES.36632.13	chrX	-	6455	16	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	49.8970495676403	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11946825	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056_11946333_11946747
ES.36632.15	chrX	-	6312	15	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	49.4277456578421	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	11994691	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11994480
ES.36632.16	chrX	-	6363	15	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-195	1	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	48.7835703356558	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTGAAGTACTTTGCA	NA	False	NA	-8	True	AATAAA	-17	NA	12026789	11902980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_12026527
ES.36632.17	chrX	-	5442	11	NNC	ENSMUSG00000040363.16	novel	6113	14	NA	NA	21770	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	61.4482709276673	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATTGAAGTACTTTGC	NA	False	NA	-9	True	AATAAA	-16	NA	11925022	11902981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907733_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582
ES.36632.19	chrX	-	6528	14	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	488	-1	intron_retention	FALSE	canonical	3	70	junction_7	37.5233260785874	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAATTGAAGTACTTTG	NA	False	NA	-10	True	AATAAA	-15	NA	11946304	11902982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.2	chrX	-	6978	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-31	-6	-31	6	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACTTTGCATCCTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	11946823	11902972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.20	chrX	-	7093	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	1568	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	49.91937376962	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAAATTGAAGTACTTT	NA	False	NA	-11	True	AATAAA	-14	NA	11945224	11902983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11944229
ES.36632.21	chrX	-	5159	9	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	23929	-2	intron_retention	FALSE	canonical	3	55	junction_5	43.1811229011011	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCAAATTGAAGTACTTT	NA	False	NA	-11	True	AATAAA	-14	NA	11922863	11902983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ES.36632.22	chrX	-	6047	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-32	-113	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	49.2654720336046	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTTTATGTTTGAAA	NA	False	NA	-122	True	CATAAA	-17	NA	11946824	11903094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946764
ES.36632.23	chrX	-	6837	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-12	116	-12	-113	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTTTATGTTTGAAA	NA	False	NA	-122	True	CATAAA	-17	NA	11946804	11903094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.24	chrX	-	6667	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	2	116	2	-113	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTTTATGTTTGAAA	NA	False	NA	-122	True	CATAAA	-17	NA	11946790	11903094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.25	chrX	-	6711	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	12	116	12	-113	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTTTATGTTTGAAA	NA	False	NA	-122	True	CATAAA	-17	NA	11946780	11903094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.26	chrX	-	6812	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	-45	120	-45	-117	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTGTTTATGTTT	NA	False	NA	NA	False	CATAAA	-13	NA	11946837	11903098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.27	chrX	-	6445	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	-54	550	-54	-547	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11946846	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.28	chrX	-	6259	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	-24	550	-24	-547	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11946816	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.29	chrX	-	5864	15	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	-142	-547	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	49.9731050114939	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	12026736	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_12026527
ES.36632.3	chrX	-	6683	14	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	47.0524068893701	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTACTTTGCATCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	11946790	11902975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.30	chrX	-	5769	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-426	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.251053395396	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11947218	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11947002
ES.36632.31	chrX	-	6321	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	-32	550	-32	-547	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11946824	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.34	chrX	-	6337	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	0	550	0	-547	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCTTGGCGTAATT	NA	False	NA	-7	True	NA	NA	NA	11946792	11903528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.35	chrX	-	5677	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-11	-549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	57.9146099081771	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGTGCTTGGCGTAA	NA	False	NA	-9	True	NA	NA	NA	11994600	11903530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926362_11926448_11927760_11927886_11994480
ES.36632.36	chrX	-	5724	14	FSM	ENSMUSG00000040363.16	ENSMUST00000043441.13	6113	14	-161	550	-161	-550	multi-exon	FALSE	canonical	2	9	junction_13	56.0447834457346	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	12026755	11903531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_12026527
ES.36632.37	chrX	-	5633	14	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	496	-550	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	47.0524068893701	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	11946296	11903531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.38	chrX	-	5611	15	NNC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-33	-550	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	49.2654720336046	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	11946825	11903531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946764
ES.36632.39	chrX	-	5926	11	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	21439	-550	intron_retention	FALSE	canonical	3	55	junction_7	43.8957856747091	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCTGTGCTTGGCGTA	NA	False	NA	-10	True	NA	NA	NA	11925353	11903531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ES.36632.4	chrX	-	8283	13	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	2	3	intron_retention	FALSE	canonical	3	71	junction_12	40.54798255017	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTACTTTGCATCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	11946790	11902975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36632.40	chrX	-	5757	15	NIC	ENSMUSG00000040363.16	novel	6839	15	NA	NA	-49	-551	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	49.4277456578421	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCTCTGTGCTTGGCGT	NA	False	NA	-11	True	NA	NA	NA	11994688	11903532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11994480
ES.36632.41	chrX	-	3828	11	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	23971	-556	intron_retention	FALSE	canonical	3	55	junction_7	44.4841544822423	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGAGCTCTGTGCTT	NA	False	NA	-16	True	NA	NA	NA	11922821	11903537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582
ES.36632.7	chrX	-	6461	15	NIC	ENSMUSG00000040363.16	novel	6941	15	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	49.9731050114939	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	12026783	11902978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_12026527
ES.36632.8	chrX	-	6885	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	2	0	2	0	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	11946790	11902978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ES.36633.1	chrX	-	189	1	Intergenic	novelGene_29987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	2674	False	NA	NA	False	NA	NA	NA	12125725	12125536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12125500_12125700
ES.36634.1	chrX	+	225	1	Intergenic	novelGene_29988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCACCAACGTGGTGAC	NA	False	NA	NA	False	NA	NA	NA	12187274	12187499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12187300_12187500
ES.36635.1	chrX	+	6341	1	Intergenic	novelGene_29989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTGGGGCCTAGGGAG	NA	False	NA	NA	False	NA	NA	NA	12260415	12266756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12260400_12266800
ES.36636.1	chrX	+	961	2	Intergenic	novelGene_29990	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTAGTCCAGTGGTG	8732	False	NA	NA	False	AATAAA	-20	NA	12273875	12275195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12273978_12274336
ES.36637.1	chrX	+	154	1	Intergenic	novelGene_29991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGTGGTACCATTTTAC	NA	False	NA	NA	False	ATTAAA	-9	NA	12326475	12326629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12326500_12326600
ES.36638.1	chrX	-	3221	1	Intergenic	novelGene_29992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCGTGTATATTTGT	NA	False	NA	NA	False	NA	NA	NA	12387477	12384256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12384300_12387500
ES.36639.1	chrX	+	314	1	Intergenic	novelGene_29993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGAGTTTCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	12395484	12395798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12395500_12395800
ES.36639.2	chrX	+	174	1	Intergenic	novelGene_29994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGTGAGCGAGGTC	NA	False	NA	NA	False	NA	NA	NA	12395486	12395660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12395500_12395700
ES.3664.1	chr10	+	1868	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	-49	3182	-49	959	multi-exon	FALSE	canonical	3	461	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCTTGTCATGATTA	NA	False	NA	NA	False	AATAAA	-25	NA	96452818	96455489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_96453335_96454137
ES.3664.3	chr10	+	1579	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	3	3419	3	722	multi-exon	FALSE	canonical	3	461	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGAGGTCTGGTTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	96452870	96455252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_96453335_96454137
ES.3664.4	chr10	+	4972	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	4	25	4	-25	multi-exon	FALSE	canonical	3	461	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACACCC	NA	False	NA	NA	False	NA	NA	NA	96452871	96458646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_96453335_96454137
ES.3664.5	chr10	+	3111	1	ISM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	1894	799	1346	-799	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGACTAGTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	96454761	96457872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_96454800_96457900
ES.36640.1	chrX	+	863	1	Intergenic	novelGene_29995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCATGTGCATATGGCT	NA	False	NA	NA	False	NA	NA	NA	12407005	12407868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12407000_12407900
ES.36641.1	chrX	-	182	1	Intergenic	novelGene_29996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAACCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	12421899	12421717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12421700_12421900
ES.36642.1	chrX	-	172	1	Intergenic	novelGene_29997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	12422091	12421919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12421900_12422100
ES.36643.10	chrX	+	1897	8	NIC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-13	-309	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	374.576713485655	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454026	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12454175_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.11	chrX	+	2045	11	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-13	-309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	488.468269184396	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454026	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12454453_12454520_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482240_12482288
ES.36643.12	chrX	+	1844	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-11	-310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATCTGTGTCACTGCAA	NA	False	NA	27	True	AATAAA	-11	NA	12454028	12482978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482633_12482813
ES.36643.13	chrX	+	3047	8	NIC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-9	-311	intron_retention	FALSE	canonical	3	980	junction_3	66.9891858467332	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCTGTGTCACTGCA	NA	False	NA	26	True	AATAAA	-10	NA	12454030	12482977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.15	chrX	+	2260	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTTACAGTTTTAT	NA	False	NA	84	True	AATAAA	-19	NA	12454040	12483288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482945_12483007
ES.36643.16	chrX	+	2029	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	1	13030	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAACAAGCTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	12454040	12496318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482978_12496301
ES.36643.18	chrX	+	1954	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	4	-309	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	355.197744221441	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454043	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473226_12473320_12475073_12475194_12481920
ES.36643.2	chrX	+	1328	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-49	1045	-49	-1045	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTGCCTATTGT	NA	False	NA	NA	False	ATTAAA	-25	NA	12453990	12482243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.21	chrX	+	1998	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	8	-309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	354.53728647351	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454047	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471481_12472514_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.22	chrX	+	1930	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	12	-311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCTGTGTCACTGCA	NA	False	NA	26	True	AATAAA	-10	NA	12454051	12482977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482333_12482403
ES.36643.23	chrX	+	1986	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	22	-309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	349.540390191177	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454061	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475187_12481920
ES.36643.26	chrX	+	1971	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	43	-301	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	356.176724920369	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGCAATTCTGAATT	NA	False	NA	36	True	AATAAA	-20	NA	12454082	12482987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472565_12473169_12473320_12475073_12475194_12481920
ES.36643.27	chrX	+	1523	5	ISM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	17315	309	17315	-309	3prime_fragment	FALSE	canonical	3	988	junction_2	70.1231060350296	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12471354	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.28	chrX	+	3269	1	Intergenic	novelGene_29999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTCTCTCTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	12491769	12495038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12491800_12495000
ES.36643.29	chrX	+	159	1	Intergenic	novelGene_30000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATCTTAGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	12493593	12493752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12493600_12493800
ES.36643.3	chrX	+	2133	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-48	239	-48	-239	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTGGTTTATTATAC	NA	False	NA	98	True	ATTAAA	-20	NA	12453991	12483049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.4	chrX	+	2361	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	-37	0	-37	0	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTTACAGTTTTAT	NA	False	NA	84	True	AATAAA	-19	NA	12454002	12483288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ES.36643.5	chrX	+	3827	9	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-35	13030	intron_retention	FALSE	non_canonical	0	0	junction_8	346.056353792269	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAACAAGCTTAATAAT	NA	False	NA	NA	False	NA	NA	NA	12454004	12496318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12475194_12481920_12482987_12496302
ES.36643.6	chrX	+	3790	8	NIC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-21	-309	intron_retention	FALSE	canonical	3	980	junction_3	49.0376781419249	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTGTCACTGCAAT	NA	False	NA	28	True	AATAAA	-12	NA	12454018	12482979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12475194_12481920
ES.36643.7	chrX	+	1998	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-21	-308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTGTCACTGCAATT	NA	False	NA	29	True	AATAAA	-13	NA	12454018	12482980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482688_12482726
ES.36643.8	chrX	+	1918	10	NNC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	-20	-311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	336.303104026379	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCTGTGTCACTGCA	NA	False	NA	26	True	AATAAA	-10	NA	12454019	12482977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920_12482289_12482403
ES.36644.1	chrX	-	187	1	Intergenic	novelGene_29998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAAATTTGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	12467540	12467353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12467400_12467500
ES.36645.1	chrX	-	1476	1	Antisense	novelGene_ENSMUSG00000031007.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	12472072	12470596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_12470600_12472100
ES.36646.1	chrX	-	158	1	Intergenic	novelGene_30001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	12501225	12501067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12501100_12501200
ES.36647.1	chrX	+	254	2	Intergenic	novelGene_30002	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTTGCTGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	12517889	12630836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12518095_12630787
ES.36647.2	chrX	+	643	1	FSM	ENSMUSG00000079871.5	ENSMUST00000115987.3	360	1	-121	-162	-121	162	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGAGTGTTGCCTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	12518420	12519063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12518400_12519100
ES.36647.3	chrX	+	178	1	Intergenic	novelGene_30003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	12533639	12533817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12533600_12533800
ES.36647.4	chrX	+	265	1	Intergenic	novelGene_30004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGTTGTGCAGATATG	NA	False	NA	NA	False	NA	NA	NA	12630622	12630887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12630600_12630900
ES.36648.1	chrX	+	177	1	Intergenic	novelGene_30005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	12635732	12635909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12635700_12635900
ES.36649.1	chrX	+	224	1	Intergenic	novelGene_30013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGATTTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12715049	12715273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12715000_12715300
ES.3665.1	chr10	-	7223	1	Antisense	novelGene_ENSMUSG00000036478.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	96464476	96457253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_96457300_96464500
ES.36650.1	chrX	+	178	1	Intergenic	novelGene_30014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAAAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	12715792	12715970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12715800_12716000
ES.36651.1	chrX	+	221	1	Intergenic	novelGene_30015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTCCCTATGGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	12729694	12729915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12729700_12729900
ES.36652.1	chrX	+	174	1	Intergenic	novelGene_30017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	12747674	12747848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12747700_12747800
ES.36653.1	chrX	+	176	1	Intergenic	novelGene_30019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCTTTAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	12752189	12752365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12752200_12752400
ES.36654.1	chrX	+	161	1	Intergenic	novelGene_30021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATGAAAAAAA	8809	False	NA	NA	False	NA	NA	NA	12771277	12771438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12771300_12771400
ES.36655.1	chrX	+	310	1	Intergenic	novelGene_30022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	12778860	12779170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12778900_12779200
ES.36656.1	chrX	-	1784	12	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	245	26554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.3226838722649	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTATTTGTATATTG	NA	False	NA	NA	False	NA	NA	NA	12628067	12515053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12515105_12609601_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.11	chrX	-	2756	8	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	102.324214621756	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539802	12521117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12532471_12532634_12535765_12535886_12539264_12539400_12539564
ES.36656.12	chrX	-	3108	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	122	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	111.833830103219	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCTTACAGTTTTTA	NA	False	NA	-8	True	AATAAA	-20	NA	12539785	12521122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530876_12535765_12535886_12539264_12539400_12539564
ES.36656.13	chrX	-	4121	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	105	-10	intron_retention	FALSE	canonical	3	18	junction_4	109.593820790935	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAAAATTCTTACAGT	NA	False	NA	-13	True	AATAAA	-15	NA	12539802	12521127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12524264_12528888_12529069_12530738_12530889_12532471_12532634_12535765_12535886_12539264_12539400_12539564
ES.36656.14	chrX	-	3078	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	-1425	-1373	intron_retention	FALSE	canonical	3	18	junction_5	103.580886267689	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCCAGGTTGCTGTTT	NA	False	NA	NA	False	AATACA	-25	NA	12541332	12522490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12532471_12532634_12535765_12535886_12539264
ES.36656.15	chrX	-	1209	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	104	1386	104	-1386	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGCTTATTTAATCTTC	NA	False	NA	NA	False	AATACA	-12	NA	12539803	12522503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ES.36656.16	chrX	-	6471	31	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-166341	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	22.2821303589521	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCTTTGGTGAAGATG	NA	False	NA	0	True	AATAAA	-31	NA	12794653	12541604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12794541
ES.36656.17	chrX	-	6992	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	-28	-1	-28	1	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTCTCTTTGGTGAAGA	NA	False	NA	-2	True	AATAAA	-29	NA	12628340	12541606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.18	chrX	-	6965	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.1554750278713	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTCTCTTTGGTGAAG	NA	False	NA	-3	True	AATAAA	-28	NA	12628446	12541607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.19	chrX	-	4429	15	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	7528	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	27.6999226404283	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACCAACTCTCTTTGGT	NA	False	NA	-7	True	AATAAA	-24	NA	12572686	12541611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12566403_12566482_12569451_12569722_12569989_12570143_12571326_12571419_12572537
ES.36656.2	chrX	-	3131	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	104	-536	104	536	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAGGACTTGGCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	12539803	12520581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ES.36656.20	chrX	-	7010	31	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	21.6224163517607	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACCAACTCTCTTTGG	NA	False	NA	-8	True	AATAAA	-23	NA	12628340	12541612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614241_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.21	chrX	-	6669	32	Fusion	ENSMUSG00000083760.2_ENSMUSG00000064127.14	novel	6963	31	NA	NA	-2656	-6	multi-exon	FALSE	canonical	0	0	junction_30	26.1974810332404	389	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTACCAACTCTCTTTG	NA	False	NA	-9	True	AATAAA	-22	NA	12783487	12541613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12780398_12780488_12783257
ES.36656.22	chrX	-	6074	25	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	58	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	19.2619010830534	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTACCAACTCTCTTTG	NA	False	NA	-9	True	AATAAA	-22	NA	12628254	12541613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12620345_12620452_12622667_12622695_12627705
ES.36656.23	chrX	-	6886	31	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	57	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	21.9452854972442	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAACTACCAACTCTC	NA	False	NA	-13	True	AATAAA	-18	NA	12628255	12541617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613717_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.24	chrX	-	6681	30	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	266	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	22.4900030638532	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGAGAACTACCAACT	NA	False	NA	-16	True	AATAAA	-15	NA	12628046	12541620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620476_12627705
ES.36656.25	chrX	-	6702	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-22	-13	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	22.6367163578842	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGAGAACTACCAACT	NA	False	NA	-16	True	AATAAA	-15	NA	12628334	12541620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.26	chrX	-	6157	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	243	-161	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	24.732652135035	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTTTTGCCTCTTTT	NA	False	NA	2	True	ATTAAA	-44	NA	12628069	12541768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.27	chrX	-	6851	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	-49	161	-49	-161	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCTTTTGCCTCTTTT	NA	False	NA	2	True	ATTAAA	-44	NA	12628361	12541768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.28	chrX	-	6410	29	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	255	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	24.5565777380335	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTCTTTTGCCTCTT	NA	False	NA	0	True	ATTAAA	-42	NA	12628057	12541770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620476_12627705
ES.36656.29	chrX	-	5543	25	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	14495	-165	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	21.0568014876165	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACCATGTCTTTTGCCTC	2925	False	NA	-2	True	ATTAAA	-40	NA	12613817	12541772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594295_12610955_12611068_12611984_12612136_12612863_12612997_12613707
ES.36656.3	chrX	-	2689	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	63	-53	63	53	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATGCGAGTCAGATTA	NA	False	NA	50	True	AAAACA	-28	NA	12539844	12521064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ES.36656.30	chrX	-	6611	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	54	-166	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.1554750278713	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAACCATGTCTTTTGCCT	NA	False	NA	-3	True	ATTAAA	-39	NA	12628258	12541773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.31	chrX	-	6737	31	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	45	-175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.6877353064014	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCACCACGAACCATGT	NA	False	NA	-12	True	ATTAAA	-30	NA	12628267	12541782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550222_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.32	chrX	-	6538	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-35	-190	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	22.6367163578842	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGAATCGTAACTTT	NA	False	NA	-27	True	ATTAAA	-15	NA	12628347	12541797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.33	chrX	-	6126	30	Fusion	ENSMUSG00000083760.2_ENSMUSG00000064127.14	novel	6963	31	NA	NA	-2698	-190	multi-exon	FALSE	canonical	0	0	junction_7	30.4325143725339	389	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGAATCGTAACTTT	NA	False	NA	-27	True	ATTAAA	-15	NA	12783529	12541797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12780398_12780488_12783414
ES.36656.34	chrX	-	5233	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	58	1672	58	-1672	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACTTGTGTATGTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	12628254	12543279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.35	chrX	-	4587	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	70	1762	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	24.732652135035	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTTTATTTAATTGT	NA	False	NA	NA	False	TATAAA	-15	NA	12628242	12543511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.36	chrX	-	5834	30	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	58	3663	58	3	5prime_fragment	FALSE	canonical	3	55	junction_6	16.6138203002884	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACTGTGATCTAGCAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	12628254	12545270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.37	chrX	-	5143	30	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	37	4375	37	5	5prime_fragment	FALSE	canonical	3	55	junction_6	16.6138203002884	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGCTTTTTGGGCTTCT	NA	False	NA	1	True	AATAAA	-18	NA	12628275	12545982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.38	chrX	-	5320	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-272	5	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	19.2046909129313	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGCTTTTTGGGCTTCT	NA	False	NA	1	True	AATAAA	-18	NA	12628584	12545982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.39	chrX	-	4937	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-28	4	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	22.8389157235752	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGCTGCTTTTTGGGCTTC	NA	False	NA	0	True	AATAAA	-17	NA	12628340	12545983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.4	chrX	-	3299	8	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	111	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	112.850090195546	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539796	12521117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12532471_12532634_12535765_12535886_12539264_12539400_12539564
ES.36656.40	chrX	-	4930	29	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	246	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	22.7361473860279	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGCTGCTTTTTGGGCTTC	NA	False	NA	0	True	AATAAA	-17	NA	12628066	12545983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620476_12627705
ES.36656.41	chrX	-	4968	30	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	231	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	21.7091354875026	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCTGCTTTTTGGGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	12628081	12545984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614238_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.42	chrX	-	4982	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	70	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	23.2737699427261	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCTGCTTTTTGGGCTT	NA	False	NA	-1	True	AATAAA	-16	NA	12628242	12545984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.43	chrX	-	5548	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-36	2	intron_retention	FALSE	canonical	3	55	junction_5	16.5356757173262	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCGCTGCTTTTTGGGCT	NA	False	NA	-2	True	AATAAA	-15	NA	12628348	12545985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.44	chrX	-	4672	29	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	276	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	24.8435923656917	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATACAAATGGCATCGC	NA	False	NA	-15	True	AATAAA	-2	NA	12628036	12545998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594295_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.45	chrX	-	4438	26	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	243	9739	243	-5359	5prime_fragment	FALSE	canonical	3	55	junction_2	17.437614515753	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGTGTAAAATAGTGGG	NA	False	NA	NA	False	AAAAAG	-12	NA	12628069	12551346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.46	chrX	-	5161	22	NNC	ENSMUSG00000064127.14	novel	627	3	NA	NA	55	6693	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	23.1877870739697	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGATTATGGCTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	12628257	12565918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12567863_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.47	chrX	-	4864	23	NNC	ENSMUSG00000064127.14	novel	627	3	NA	NA	63	6479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	29.2166317402936	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTACTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	12628249	12566132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12567863_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705_12628102_12628176
ES.36656.48	chrX	-	6614	21	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	-23	24525	-23	6479	5prime_fragment	FALSE	canonical	3	69	junction_7	14.6706339331332	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTACTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	12628335	12566132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.5	chrX	-	3186	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	81.2617512869506	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539845	12521117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ES.36656.50	chrX	-	5528	4	NIC	ENSMUSG00000064127.14	novel	3729	16	NA	NA	7077	6475	intron_retention	FALSE	canonical	3	77	junction_3	2.94392028877595	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTGTATTACTTAA	NA	False	NA	NA	False	NA	NA	NA	12573137	12566136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12569722_12569989_12571419_12572537_12572685_12572770
ES.36656.51	chrX	-	4641	21	NNC	ENSMUSG00000064127.14	novel	627	3	NA	NA	273	6470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.6128649427002	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTATTTATTTGTATTA	NA	False	NA	NA	False	NA	NA	NA	12628039	12566141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12567863_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.52	chrX	-	4774	22	NNC	ENSMUSG00000064127.14	novel	627	3	NA	NA	66	6317	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	23.1877870739697	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGGTTCTCTGATGC	NA	False	NA	NA	False	NA	NA	NA	12628246	12566294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12567863_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.54	chrX	-	2703	17	NNC	ENSMUSG00000064127.14	novel	2561	17	NA	NA	-149	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.5307833678878	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAACTATTTTAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	12628461	12575378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12575480_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612859_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.56	chrX	-	1750	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	268	-19578	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.536133759253	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGAGTATGAATTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	12628044	12594945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12595287_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.57	chrX	-	6382	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	57	-21170	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.536133759253	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAATTTTTAGTCTCCT	NA	False	NA	NA	False	TATAAA	-9	NA	12628255	12596537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12601300_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.58	chrX	-	3737	10	ISM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	-35	33563	-35	-33563	5prime_fragment	FALSE	canonical	3	97	junction_8	6.20035841257942	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCATCTAGGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	12628347	12608930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.59	chrX	-	3430	9	NNC	ENSMUSG00000064127.14	novel	2561	17	NA	NA	266	-33566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.5470587051817	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGGCATCTAGGTTGA	NA	False	NA	NA	False	NA	NA	NA	12628046	12608933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620476_12627705
ES.36656.60	chrX	-	3231	10	ISM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	305	33729	305	-33729	5prime_fragment	FALSE	canonical	3	97	junction_8	6.20035841257942	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACATACTTGTCTG	NA	False	NA	NA	False	NA	NA	NA	12628007	12609096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.61	chrX	-	2012	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	-51	-34251	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGCAGAATAATAGGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	12628363	12609618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.62	chrX	-	2362	3	ISM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	238	43118	238	-43118	5prime_fragment	FALSE	canonical	3	97	junction_1	4.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCTCTGTAGTTTA	NA	False	NA	NA	False	NA	NA	NA	12628074	12618485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_12620452_12622667_12622695_12627705
ES.36656.63	chrX	-	195	1	Intergenic	novelGene_30006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	12642153	12641958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12642000_12642200
ES.36656.64	chrX	-	180	2	Intergenic	novelGene_30010	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12749671	12696926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12696966_12749530
ES.36656.66	chrX	-	178	2	Intergenic	novelGene_30008	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12749668	12696926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12696960_12749523
ES.36656.67	chrX	-	178	1	Intergenic	novelGene_30007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12697104	12696926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12696900_12697100
ES.36656.68	chrX	-	177	2	Intergenic	novelGene_30009	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	12749668	12696926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12696943_12749507
ES.36656.69	chrX	-	179	2	Intergenic	novelGene_30011	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	12749667	12696927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12696977_12749537
ES.36656.7	chrX	-	6979	36	Fusion	ENSMUSG00000044148.7_ENSMUSG00000064127.14	novel	5129	28	NA	NA	57	0	multi-exon	TRUE	canonical	0	0	junction_6	56.3004041744292	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12628255	12521117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ES.36656.71	chrX	-	125	1	Intergenic	novelGene_30012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGTCTGTTTGCTACAA	NA	False	NA	NA	False	NA	NA	NA	12707373	12707248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12707200_12707400
ES.36656.72	chrX	-	159	1	Intergenic	novelGene_30016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	12738902	12738743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12738700_12738900
ES.36656.73	chrX	-	182	1	Intergenic	novelGene_30018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	12749672	12749490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12749500_12749700
ES.36656.74	chrX	-	175	1	Intergenic	novelGene_30020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTAGAGTGAGCAAGGCT	NA	False	NA	NA	False	NA	NA	NA	12769950	12769775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12769800_12770000
ES.36656.9	chrX	-	3979	6	NIC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	95	0	intron_retention	FALSE	canonical	3	210	junction_3	24.2520102259586	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539812	12521117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ES.36657.1	chrX	-	135	1	Intergenic	novelGene_30023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12797152	12797017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12797000_12797200
ES.36658.1	chrX	-	196	1	Intergenic	novelGene_30024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAACATCTTAAATGAG	NA	False	NA	NA	False	NA	NA	NA	12797447	12797251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12797300_12797400
ES.36659.1	chrX	+	1655	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	9	-407	9	407	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGAGTTTTTTGGTCTCT	NA	False	NA	3	True	AATAAA	-28	NA	12803119	12804774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12803100_12804800
ES.3666.1	chr10	-	2802	1	Intergenic	novelGene_2803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	96468744	96465942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_96465900_96468700
ES.36660.1	chrX	-	156	1	Intergenic	novelGene_30025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	12818093	12817937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12817900_12818100
ES.36661.1	chrX	+	178	1	Intergenic	novelGene_30026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACACTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	12853560	12853738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12853600_12853700
ES.36662.1	chrX	+	177	1	Intergenic	novelGene_30027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAAGCCGTATTCAC	NA	False	NA	NA	False	NA	NA	NA	12869531	12869708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12869500_12869700
ES.36663.1	chrX	+	177	1	Intergenic	novelGene_30028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAGAAAACC	NA	False	NA	NA	False	NA	NA	NA	12871696	12871873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12871700_12871900
ES.36664.1	chrX	+	9693	46	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-223	1038	multi-exon	TRUE	canonical	1	3	junction_2	250.797005121229	1448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCCTGTGGTATGTT	NA	False	NA	NA	False	AATAGA	-19	NA	12908030	13037175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.10	chrX	+	8461	46	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-166	-168	multi-exon	FALSE	canonical	0	0	junction_1	248.543043444077	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAATGTTTGACTGTTA	NA	False	NA	NA	False	AATAAA	-42	NA	12908087	13035969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.100	chrX	+	4144	17	FSM	ENSMUSG00000031010.18	ENSMUST00000169594.9	2772	17	1	-1373	1	1373	multi-exon	FALSE	canonical	3	336	junction_14	127.465421168841	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	808	False	NA	NA	False	NA	NA	NA	12937737	12991061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406
ES.36664.101	chrX	+	3113	18	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1399	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	123.687014308902	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCACCTTGTACAAGCT	808	False	NA	NA	False	NA	NA	NA	12937737	12991087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806
ES.36664.102	chrX	+	9911	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1328	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTGTATTTTTTACG	808	False	NA	NA	False	NA	NA	NA	12937737	13037465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.103	chrX	+	8426	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	-169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	256.056008533627	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAATGTTTGACTGTT	808	False	NA	NA	False	AATAAA	-41	NA	12937737	13035968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966757_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024039_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.104	chrX	+	12484	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	224.014604148705	1458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	808	False	NA	NA	False	AATAAA	-16	NA	12937737	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971031_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.106	chrX	+	9543	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	455	intron_retention	FALSE	non_canonical	0	0	junction_2	256.231480886952	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACTTGGTAATGGGAATT	809	False	NA	NA	False	AATAAA	-16	NA	12937738	13036592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964687_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987662_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.11	chrX	+	8545	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-163	-180	multi-exon	FALSE	canonical	0	0	junction_1	319.317579293914	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908090	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001313_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.110	chrX	+	8323	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	3	-306	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTGGAGAGTTTATT	810	False	NA	NA	False	NA	NA	NA	12937739	13035831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.112	chrX	+	9059	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	5	-16	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAGTAAATCAA	812	False	NA	NA	False	NA	NA	NA	12937741	13036121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.119	chrX	+	9475	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	853	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCAGTTAAAGCTGTGT	817	False	NA	NA	False	AATAAA	-20	NA	12937746	13036990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.12	chrX	+	3441	1	Genic_Genomic	ENSMUSG00000087424.2	novel	NA	NA	NA	NA	-159	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCATTTCTGGCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	12908094	12911535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_12908100_12911500
ES.36664.121	chrX	+	11892	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	-5	0	-5	0	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	818	False	NA	NA	False	AATAAA	-16	NA	12937747	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.122	chrX	+	3247	16	NIC	ENSMUSG00000031010.18	novel	2772	17	NA	NA	-5	5	intron_retention	FALSE	canonical	3	336	junction_13	118.769730524612	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCCTACATGATGGAT	818	False	NA	NA	False	NA	NA	NA	12937747	12989693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406
ES.36664.124	chrX	+	8441	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	-180	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	818	False	NA	NA	False	AATAAA	-30	NA	12937747	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.125	chrX	+	8922	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	-180	intron_retention	FALSE	canonical	3	36	junction_43	219.231820019565	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	818	False	NA	NA	False	AATAAA	-30	NA	12937747	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.126	chrX	+	9521	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	452	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGACTTGGTAATGGGA	818	False	NA	NA	False	AATAAA	-13	NA	12937747	13036589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.127	chrX	+	4708	25	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5	2711	intron_retention	FALSE	canonical	3	336	junction_13	110.838087304059	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGGACATCAGGATGT	818	False	NA	NA	False	NA	NA	NA	12937747	13002732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683
ES.36664.129	chrX	+	8745	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4	-308	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGTGGAGAGTTTA	819	False	NA	NA	False	NA	NA	NA	12937748	13035829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.13	chrX	+	12150	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-157	0	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	1468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	12908096	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.130	chrX	+	11743	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	229.053791730617	1458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	819	False	NA	NA	False	AATAAA	-13	NA	12937748	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13007998_13010685_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.132	chrX	+	8277	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	-3	3613	-3	-183	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	820	False	NA	NA	False	AATAAA	-27	NA	12937749	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.134	chrX	+	9930	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-3	876	intron_retention	FALSE	canonical	0	0	junction_15	224.995289206884	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGGTGATTTGA	820	False	NA	NA	False	AATAAA	-43	NA	12937749	13037013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.137	chrX	+	8262	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-2	-308	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGTGGAGAGTTTA	821	False	NA	NA	False	NA	NA	NA	12937750	13035829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.14	chrX	+	8498	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-115	-180	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908138	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.140	chrX	+	9642	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	1	1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	281.613431433419	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	824	False	NA	NA	False	AATAGA	-18	NA	12937753	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991801_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.141	chrX	+	10370	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1323	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGCTTGGTTGTATTTT	825	False	NA	NA	False	NA	NA	NA	12937754	13037460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.142	chrX	+	11900	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	825	False	NA	NA	False	AATAAA	-16	NA	12937754	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.143	chrX	+	2349	2	ISM	ENSMUSG00000031010.18	ENSMUST00000169594.9	2772	17	18	49104	2	-47816	5prime_fragment	FALSE	canonical	3	486	junction_1	0	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAATTTAGTGGTG	825	False	NA	NA	False	AATACA	-17	NA	12937754	12940584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12937973_12938453
ES.36664.145	chrX	+	10320	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1321	intron_retention	FALSE	non_canonical	0	0	junction_8	222.750512047187	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAAGCTTGGTTGTATT	825	False	NA	NA	False	NA	NA	NA	12937754	13037458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974030_12974077_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.149	chrX	+	9697	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	251.521709067677	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	825	False	NA	NA	False	AATAGA	-15	NA	12937754	13037171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13034261_13034359_13035585
ES.36664.153	chrX	+	9789	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1319	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACAAGCTTGGTTGTA	825	False	NA	NA	False	NA	NA	NA	12937754	13037456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.154	chrX	+	12029	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_45	220.534786595597	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	825	False	NA	NA	False	AATAAA	-16	NA	12937754	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035567
ES.36664.156	chrX	+	9667	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	2	1037	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	254.060351291379	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	825	False	NA	NA	False	AATAGA	-18	NA	12937754	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12939347_12939397_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.158	chrX	+	12043	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	826	False	NA	NA	False	AATAAA	-16	NA	12937755	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.159	chrX	+	9538	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4	1022	combination_of_known_junctions	FALSE	canonical	3	36	junction_43	245.628124651545	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTTAAGAAGAACTTTT	827	False	NA	NA	False	AATAGA	-3	NA	12937756	13037159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.16	chrX	+	9614	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-9	1035	multi-exon	FALSE	canonical	0	0	junction_1	296.996923376782	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	NA	False	NA	NA	False	AATAGA	-16	NA	12908244	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030921_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.160	chrX	+	8296	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4	-307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	281.914036455472	1411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAGTGGAGAGTTTAT	827	False	NA	NA	False	NA	NA	NA	12937756	13035830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964833_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980753_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.161	chrX	+	4421	27	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4	3936	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	113.462796603194	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGCTTGGCAGAC	827	False	NA	NA	False	NA	NA	NA	12937756	13003957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846
ES.36664.163	chrX	+	9393	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4	1035	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	221.287595442434	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	827	False	NA	NA	False	AATAGA	-16	NA	12937756	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12960272_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.164	chrX	+	8161	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	5	-306	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTGGAGAGTTTATT	828	False	NA	NA	False	NA	NA	NA	12937757	13035831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.166	chrX	+	13539	45	Fusion	ENSMUSG00000094259.2_ENSMUSG00000031010.18	novel	11887	45	NA	NA	6	4895	intron_retention	FALSE	canonical	3	383	junction_13	181.354298859652	1554	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGGGTTTCTATGG	829	False	NA	NA	False	NA	NA	NA	12937758	13060809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13055776
ES.36664.169	chrX	+	9899	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8	1324	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTGGTTGTATTTTT	831	False	NA	NA	False	NA	NA	NA	12937760	13037461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.170	chrX	+	11009	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8	-163	intron_retention	FALSE	canonical	3	383	junction_14	189.225132650096	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTGACTGTTAATTCT	831	False	NA	NA	False	NA	NA	NA	12937760	13035974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.171	chrX	+	8279	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8	-180	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	227.176588757158	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	831	False	NA	NA	False	AATAAA	-30	NA	12937760	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.172	chrX	+	3249	16	NIC	ENSMUSG00000031010.18	novel	2772	17	NA	NA	8	5	intron_retention	FALSE	canonical	3	383	junction_13	108.99692146519	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCCTACATGATGGAT	831	False	NA	NA	False	NA	NA	NA	12937760	12989693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406
ES.36664.173	chrX	+	8590	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8	15	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCATTCATTCATGTCA	831	False	NA	NA	False	AGTAAA	-16	NA	12937760	13036152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.174	chrX	+	9646	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8	1037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	252.987789682417	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	831	False	NA	NA	False	AATAGA	-18	NA	12937760	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991833_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.176	chrX	+	9423	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	11	866	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGTTTCAAAGAAAATT	834	False	NA	NA	False	AATAAA	-33	NA	12937763	13037003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.178	chrX	+	9108	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	12	537	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTATTTGATGTGCTT	835	False	NA	NA	False	AATACA	-40	NA	12937764	13036674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.18	chrX	+	9589	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-2	1037	multi-exon	FALSE	canonical	0	0	junction_1	274.110971449862	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12908251	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908351_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.180	chrX	+	9674	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	12	1034	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	254.479476334019	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	835	False	NA	NA	False	AATAGA	-15	NA	12937764	13037171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.181	chrX	+	9445	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	12	1036	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	231.485665041779	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTGTCCTGTGGTATG	835	False	NA	NA	False	AATAGA	-17	NA	12937764	13037173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.185	chrX	+	11919	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_43	247.666801418344	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGTTTTTCTTTCAT	837	False	NA	NA	False	AATAAA	-14	NA	12937766	13039565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.187	chrX	+	8832	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	20	-187	intron_retention	FALSE	canonical	0	0	junction_19	223.633928063234	1414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAAGGTGTATATAGTA	843	False	NA	NA	False	AATAAA	-23	NA	12937772	13035950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995225_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.188	chrX	+	8147	44	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	22	-4180	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	181.775115283985	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTTAAACCTTCATG	845	False	NA	NA	False	NA	NA	NA	12937774	13031957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510
ES.36664.192	chrX	+	12176	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	26	1037	intron_retention	FALSE	canonical	3	336	junction_14	192.013314954549	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	849	False	NA	NA	False	AATAGA	-18	NA	12937778	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.193	chrX	+	8257	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	26	-308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	258.519501855288	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGAGTGGAGAGTTTA	849	False	NA	NA	False	NA	NA	NA	12937778	13035829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964681_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998098_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.194	chrX	+	11212	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	26	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	225.81158320846	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	849	False	NA	NA	False	AATAGA	-10	NA	12937778	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13013213_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.2	chrX	+	9813	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-213	1037	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12908040	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.20	chrX	+	11095	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-1	-899	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	1467	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTGTTTCTTTTCATT	NA	False	NA	NA	False	AATACA	-16	NA	12908252	13038668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.200	chrX	+	4269	26	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	29	2772	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	113.932962745643	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTATGAGAAGGTAA	852	False	NA	NA	False	AATGAA	-9	NA	12937781	13002793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683
ES.36664.202	chrX	+	9582	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	29	1037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	226.492955222524	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	852	False	NA	NA	False	AATAGA	-18	NA	12937781	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966680_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.204	chrX	+	8349	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	32	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	225.771909372553	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	855	False	NA	NA	False	AATAAA	-30	NA	12937784	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024025_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.205	chrX	+	5546	33	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	32	14412	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	113.685107691982	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATCTTAAGATATCTT	855	False	NA	NA	False	AATAAA	-19	NA	12937784	13014433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183
ES.36664.208	chrX	+	12657	44	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	41	1037	intron_retention	FALSE	canonical	3	383	junction_13	182.628080218113	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	864	False	NA	NA	False	AATAGA	-18	NA	12937793	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.21	chrX	+	11983	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	272.39783121366	1468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	12908253	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.211	chrX	+	10022	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	52	1037	intron_retention	FALSE	canonical	0	0	junction_9	225.263925785578	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	875	False	NA	NA	False	AATAGA	-18	NA	12937804	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976326_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.214	chrX	+	8525	46	NNC	ENSMUSG00000031010.18	novel	2772	17	NA	NA	428	-180	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	252.106728329761	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	1251	False	NA	NA	False	AATAAA	-30	NA	12938180	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.215	chrX	+	8065	45	NNC	ENSMUSG00000031010.18	novel	2772	17	NA	NA	798	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	225.017330599774	1415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	1621	False	NA	NA	False	AATAAA	-30	NA	12938550	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964694_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.216	chrX	+	8493	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	1220	-183	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	220.50418372748	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	2043	False	NA	NA	False	AATAAA	-27	NA	12938972	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12939397_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.217	chrX	+	9577	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	1236	884	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	250.996825693602	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATTTGAATATGTGT	2059	False	NA	NA	False	AATAAA	-38	NA	12938988	13037021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12939397_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.218	chrX	+	11126	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	1298	-902	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	220.50418372748	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGCTTTGTTTCTTTTC	2121	False	NA	NA	False	AATACA	-13	NA	12939050	13038665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12939397_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.219	chrX	+	12008	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	1304	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	256.292120102133	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	2127	False	NA	NA	False	AATAAA	-16	NA	12939056	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12939397_12960162_12960417_12964688_12964836_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.22	chrX	+	9637	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	1035	multi-exon	FALSE	canonical	0	0	junction_1	274.110971449862	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	NA	False	NA	NA	False	AATAGA	-16	NA	12908253	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908403_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.220	chrX	+	8374	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	1320	-187	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	222.882500406836	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAAGGTGTATATAGTA	2143	False	NA	NA	False	AATAAA	-23	NA	12939072	13035950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12939397_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.221	chrX	+	815	1	Intergenic	novelGene_30032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGTAAATAATTAAAAAATA	3433	False	NA	NA	False	NA	NA	NA	12940362	12941177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12940400_12941200
ES.36664.222	chrX	+	7452	41	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-10311	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	228.870372700356	1410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	NA	False	NA	NA	False	AATAAA	-27	NA	12969611	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977364_12979818_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.227	chrX	+	7112	38	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5943	-183	combination_of_known_junctions	FALSE	canonical	3	36	junction_36	224.400927981998	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	NA	False	NA	NA	False	AATAAA	-27	NA	12973979	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.23	chrX	+	8252	46	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	-180	multi-exon	FALSE	canonical	1	3	junction_2	250.797005121229	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908253	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.231	chrX	+	6450	34	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-2594	-191	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	244.772096544961	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGGCAAAGGTGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	12977328	13035946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.232	chrX	+	9628	33	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-126	-183	intron_retention	FALSE	canonical	3	383	junction_2	184.720047893427	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	1922	False	NA	NA	False	AATAAA	-27	NA	12979796	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.233	chrX	+	7525	34	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	42044	2567	-126	863	3prime_fragment	FALSE	canonical	3	336	junction_2	186.844617068452	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGTGTTTCAAAGAAA	1922	False	NA	NA	False	AATAAA	-30	NA	12979796	13037000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.234	chrX	+	3261	18	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-126	8354	combination_of_known_junctions	FALSE	canonical	3	383	junction_2	110.873599279996	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTACCTCGTGTGTCCCC	1922	False	NA	NA	False	NA	NA	NA	12979796	13008375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945
ES.36664.237	chrX	+	6368	1	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4797	1399	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	750	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCACCTTGTACAAGCT	6845	False	NA	NA	False	NA	NA	NA	12984719	12991087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12984700_12991100
ES.36664.238	chrX	+	6003	31	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-7629	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	231.528901483642	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	9795	False	NA	NA	False	AATAAA	-27	NA	12987669	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.239	chrX	+	6986	30	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	51646	2546	-5900	884	3prime_fragment	FALSE	canonical	3	671	junction_4	159.685570949789	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATTTGAATATGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	12989398	13037021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.24	chrX	+	9432	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	884	multi-exon	FALSE	canonical	3	31	junction_2	270.94939241751	1446	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATTTGAATATGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	12908253	13037021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.242	chrX	+	9337	30	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-5716	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.238970368686	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	12989582	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12989754_12990818_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.243	chrX	+	9087	28	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	53880	0	-3666	0	3prime_fragment	FALSE	canonical	3	671	junction_2	155.408457786939	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	12991632	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.244	chrX	+	6329	27	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	56692	2546	-854	884	3prime_fragment	FALSE	canonical	3	671	junction_1	154.784943383473	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATTTGAATATGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	12994444	13037021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.247	chrX	+	9822	27	Fusion	ENSMUSG00000094574.2_ENSMUSG00000031010.18	novel	11887	45	NA	NA	-751	4894	multi-exon	FALSE	canonical	3	671	junction_1	154.784943383473	1472	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGGGTTTCTATGG	NA	False	NA	NA	False	NA	NA	NA	12994547	13050713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13045681
ES.36664.248	chrX	+	4755	25	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	3	-237	combination_of_known_splicesites	FALSE	canonical	1	5	junction_16	240.798148381355	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGTGTATAGTGTTTT	NA	False	NA	NA	False	AATATA	-15	NA	12995301	13035900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.249	chrX	+	6375	25	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	58711	2108	898	1322	3prime_fragment	FALSE	canonical	3	785	junction_8	146.111258977534	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAAGCTTGGTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	12996463	13037459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.25	chrX	+	9593	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	1035	multi-exon	FALSE	canonical	0	0	junction_1	297.371299861127	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	NA	False	NA	NA	False	AATAGA	-16	NA	12908253	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.250	chrX	+	6090	25	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	58711	2393	898	1037	3prime_fragment	FALSE	canonical	3	785	junction_8	146.111258977534	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12996463	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.251	chrX	+	5434	21	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	64929	2393	7116	1037	3prime_fragment	FALSE	canonical	3	785	junction_4	145.548093426194	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	13002681	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.252	chrX	+	5184	20	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	7212	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	264.378767990149	1419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTTTGTCCTGTGGT	NA	False	NA	NA	False	AATAGA	-14	NA	13002777	13037170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13027005_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.253	chrX	+	7698	20	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	66092	3	8279	-3	3prime_fragment	FALSE	canonical	3	785	junction_3	143.700056963075	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	13003844	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.254	chrX	+	5305	20	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	66092	2396	8279	1034	3prime_fragment	FALSE	canonical	3	785	junction_3	143.700056963075	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	NA	False	NA	NA	False	AATAGA	-15	NA	13003844	13037171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.255	chrX	+	4125	20	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8281	-190	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	336.767919462272	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGCAAAGGTGTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	13003846	13035947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022991_13023913_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.256	chrX	+	7464	19	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	8342	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	277.002050177375	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13003907	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.257	chrX	+	6522	18	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	10842	-165	intron_retention	FALSE	canonical	3	36	junction_16	274.617607683533	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTGACTGTTAATT	NA	False	NA	NA	False	AATAAA	-45	NA	13006407	13035972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.259	chrX	+	8457	18	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	68914	-1052	11101	1052	3prime_fragment	FALSE	canonical	3	785	junction_1	133.558483489858	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGGTTTCTATGGT	NA	False	NA	NA	False	NA	NA	NA	13006666	13040619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.26	chrX	+	9570	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	1029	multi-exon	FALSE	canonical	0	0	junction_1	274.110971449862	1447	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	NA	False	NA	NA	False	AATAGA	-10	NA	12908253	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.260	chrX	+	4883	17	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	70191	2395	12378	1035	3prime_fragment	FALSE	canonical	3	819	junction_1	120.104105232711	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	NA	False	NA	NA	False	AATAGA	-16	NA	13007943	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.261	chrX	+	4932	17	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	12379	1037	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	275.516723346787	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	13007944	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.262	chrX	+	3662	17	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	70192	3615	12379	-185	3prime_fragment	FALSE	canonical	3	819	junction_1	120.104105232711	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGTGTATATAGTATA	NA	False	NA	NA	False	AATAAA	-25	NA	13007944	13035952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.263	chrX	+	6376	17	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	70192	901	12379	-901	3prime_fragment	FALSE	canonical	3	819	junction_1	120.104105232711	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTTGTTTCTTTTCA	NA	False	NA	NA	False	AATACA	-14	NA	13007944	13038666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.264	chrX	+	3442	16	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	15015	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	285.467336134977	1394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	NA	False	NA	NA	False	AATAAA	-27	NA	13010580	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035603
ES.36664.265	chrX	+	6055	13	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-15521	-190	intron_retention	FALSE	canonical	3	952	junction_3	80.56480310905	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGCAAAGGTGTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	13011574	13035947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.266	chrX	+	5717	13	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-15521	-235	intron_retention	FALSE	canonical	3	952	junction_3	89.1621494182867	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTATAGTGTTTTGT	NA	False	NA	NA	False	AATATA	-17	NA	13011574	13035902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.267	chrX	+	7609	14	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	75504	3	-13839	-3	3prime_fragment	FALSE	canonical	3	952	junction_3	85.6664786373887	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	13013256	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.268	chrX	+	6653	14	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	75564	899	-13779	-899	3prime_fragment	FALSE	canonical	3	952	junction_3	85.6664786373887	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTGTTTCTTTTCATT	NA	False	NA	NA	False	AATACA	-16	NA	13013316	13038668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.269	chrX	+	5123	14	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	76429	1564	-12914	-1564	3prime_fragment	FALSE	canonical	3	952	junction_3	85.6664786373887	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTGTGAATTTTTCTT	NA	False	NA	NA	False	AAGAAA	-14	NA	13014181	13038003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.27	chrX	+	8267	46	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	-180	multi-exon	FALSE	canonical	1	3	junction_2	248.808671596728	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908253	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.270	chrX	+	6388	15	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-12894	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	296.026784502445	1436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTTGGGTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	13014201	13039562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13014375_13017508_13017683_13020330_13020473_13022232_13022528_13022801_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.271	chrX	+	6555	12	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	82343	0	-7000	0	3prime_fragment	FALSE	canonical	3	952	junction_1	83.5984103609395	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13020095	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.272	chrX	+	3221	12	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6661	454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	333.138245941667	1405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGACTTGGTAATGGGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	13020434	13036591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13020473_13022232_13022987_13023907_13024013_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.273	chrX	+	177	1	Intergenic	novelGene_30033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTGACTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	13021422	13021599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13021400_13021600
ES.36664.274	chrX	+	6228	11	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4865	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	338.257948908817	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13022230	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.275	chrX	+	3483	10	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4641	-190	intron_retention	FALSE	canonical	3	1026	junction_7	69.3397432934389	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGCAAAGGTGTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	13022454	13035947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13032967_13035585
ES.36664.276	chrX	+	5042	11	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4583	-904	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	338.257948908817	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGCTTTGTTTCTTT	NA	False	NA	NA	False	AATACA	-11	NA	13022512	13038663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.277	chrX	+	3290	12	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-4416	1029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	333.073044380001	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	NA	False	NA	NA	False	AATAGA	-10	NA	13022679	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585_13036952_13036991
ES.36664.278	chrX	+	1688	9	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	87204	3613	-2139	-183	3prime_fragment	FALSE	canonical	3	1026	junction_5	73.2707948298638	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	NA	False	NA	NA	False	AATAAA	-27	NA	13024956	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.279	chrX	+	6322	4	NIC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	123	-5	intron_retention	FALSE	canonical	3	1026	junction_1	90.2748888426652	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTTGGGTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	13027218	13039562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13027951_13030950_13031108_13031510_13032967_13035585
ES.36664.28	chrX	+	7219	41	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	0	-306	multi-exon	FALSE	canonical	0	0	junction_28	312.52455503528	1421	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTGGAGAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	12908253	13035831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.280	chrX	+	4536	5	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	90107	3	764	-3	3prime_fragment	FALSE	canonical	3	1026	junction_1	82.8986580108508	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	13027859	13039564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.281	chrX	+	3635	5	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	90107	904	764	-904	3prime_fragment	FALSE	canonical	3	1026	junction_1	82.8986580108508	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGGCTTTGTTTCTTT	NA	False	NA	NA	False	AATACA	-11	NA	13027859	13038663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.282	chrX	+	4392	4	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	90853	2401	1510	1029	3prime_fragment	FALSE	canonical	3	1088	junction_2	61.7215971565509	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	NA	False	NA	NA	False	AATAGA	-10	NA	13028605	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.283	chrX	+	4293	3	ISM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	93756	0	4413	0	3prime_fragment	FALSE	canonical	3	1088	junction_1	53.5	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13031508	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13031724_13032870_13032967_13035585
ES.36664.284	chrX	+	4082	4	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	4558	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	539.878381366273	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13031653	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13031724_13032870_13032967_13035585_13038803_13038868
ES.36664.285	chrX	+	168	1	Intergenic	novelGene_30035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGTACACATA	24	False	NA	NA	False	NA	NA	NA	13042052	13042220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13042100_13042200
ES.36664.286	chrX	+	1487	1	FSM	ENSMUSG00000094574.2	ENSMUST00000120922.2	138	1	100	-1449	100	1449	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	3753	False	NA	NA	False	AATAGA	-16	NA	13045781	13047268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13045800_13047300
ES.36664.287	chrX	+	3300	1	Intergenic	novelGene_30036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	4334	False	NA	NA	False	AATAAA	-16	NA	13046362	13049662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13046400_13049700
ES.36664.288	chrX	+	2135	1	Intergenic	novelGene_30037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGGCTTTGTTTCTT	4595	False	NA	NA	False	AATACA	-10	NA	13046623	13048758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13046600_13048800
ES.36664.289	chrX	+	167	1	Intergenic	novelGene_30038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGTACACATACA	NA	False	NA	NA	False	NA	NA	NA	13052150	13052317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13052200_13052300
ES.36664.290	chrX	+	3976	1	FSM	ENSMUSG00000094259.2	ENSMUST00000118324.2	138	1	6	-3844	6	3844	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	13055782	13059758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13055800_13059800
ES.36664.291	chrX	+	1394	1	FSM	ENSMUSG00000094259.2	ENSMUST00000118324.2	138	1	21	-1277	21	1277	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGTGTTTCAAAGAAA	NA	False	NA	NA	False	AATAAA	-30	NA	13055797	13057191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13055800_13057200
ES.36664.292	chrX	+	3869	2	Genic_Genomic	ENSMUSG00000094259.2	novel	138	1	NA	NA	71	3841	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	13055847	13059755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13057322_13057360
ES.36664.293	chrX	+	189	1	Intergenic	novelGene_30039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGTGTATATAGTATAT	NA	False	NA	NA	False	AATAAA	-26	NA	13055955	13056144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13056000_13056100
ES.36664.294	chrX	+	1147	1	Intergenic	novelGene_30040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTTTTTGTCCTGTGG	NA	False	NA	NA	False	AATAGA	-13	NA	13056213	13057360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13056200_13057400
ES.36664.295	chrX	+	2471	1	Intergenic	novelGene_30041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCTTTTCATTGA	NA	False	NA	NA	False	AATACA	-18	NA	13056390	13058861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13056400_13058900
ES.36664.3	chrX	+	12167	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-189	0	multi-exon	FALSE	canonical	3	31	junction_2	270.94939241751	1468	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	12908064	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.30	chrX	+	8632	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	9	-180	multi-exon	FALSE	canonical	3	11	junction_1	271.683365582465	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908262	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908607_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.32	chrX	+	8610	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	16	-180	multi-exon	FALSE	canonical	3	11	junction_1	273.401876385921	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908269	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908607_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.33	chrX	+	8872	2	FSM	ENSMUSG00000087424.2	ENSMUST00000127521.2	1749	2	17	-7140	17	7053	multi-exon	FALSE	canonical	3	50	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12908270	12918589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12908349_12909795
ES.36664.34	chrX	+	3247	2	FSM	ENSMUSG00000087424.2	ENSMUST00000127521.2	1749	2	17	-1515	17	1428	multi-exon	FALSE	canonical	3	50	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCTGCGCTCTCTAC	NA	False	NA	NA	False	ATTAAA	-19	NA	12908270	12912964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12908349_12909795
ES.36664.35	chrX	+	1089	1	Intergenic	novelGene_30029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTGACTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	12908376	12909465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12908400_12909500
ES.36664.36	chrX	+	9641	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	158	1029	multi-exon	FALSE	canonical	3	11	junction_1	273.401876385921	1447	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	NA	False	NA	NA	False	AATAGA	-10	NA	12908447	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908607_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.37	chrX	+	9589	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	233	1037	multi-exon	FALSE	canonical	3	11	junction_1	271.683365582465	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12908522	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908607_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.38	chrX	+	9401	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-23559	876	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	248.244696087958	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGGTGATTTGA	NA	False	NA	NA	False	AATAAA	-43	NA	12914177	13037013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12914335_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.39	chrX	+	3777	15	NNC	ENSMUSG00000031010.18	novel	523	5	NA	NA	-23506	17	intron_retention	FALSE	canonical	3	4	junction_1	260.374504614145	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTGCTAATTATCAGT	NA	False	NA	NA	False	AAGAAA	-8	NA	12914230	12988417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12914335_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980884_12982847_12982997_12987671
ES.36664.4	chrX	+	8671	48	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-181	-163	multi-exon	FALSE	canonical	0	0	junction_2	294.667668496904	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTGACTGTTAATTCT	NA	False	NA	NA	False	NA	NA	NA	12908072	13035974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12917547_12917653_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.40	chrX	+	9492	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-23491	1035	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	248.244696087958	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	NA	False	NA	NA	False	AATAGA	-16	NA	12914245	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12914335_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.41	chrX	+	9479	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-23487	1037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	303.735235580815	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12914249	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12914335_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991851_12994448_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.42	chrX	+	160	1	Intergenic	novelGene_30031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAGAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	12936151	12936311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_12936200_12936300
ES.36664.43	chrX	+	9828	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-499	1328	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	220.764724385618	1441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTGTATTTTTTACG	308	False	NA	NA	False	NA	NA	NA	12937237	13037465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.44	chrX	+	9452	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-433	1033	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	223.139937748001	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTTTGTCCTGTGGT	374	False	NA	NA	False	AATAGA	-14	NA	12937303	13037170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.45	chrX	+	9580	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-431	1037	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	219.759561092022	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	376	False	NA	NA	False	AATAGA	-18	NA	12937305	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.46	chrX	+	8152	45	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-332	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	254.652472430322	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTATATAGTATATT	475	False	NA	NA	False	AATAAA	-27	NA	12937404	13035954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.47	chrX	+	8197	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-272	-187	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	219.759561092022	1414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAAGGTGTATATAGTA	535	False	NA	NA	False	AATAAA	-23	NA	12937464	13035950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.48	chrX	+	9408	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-271	1037	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	282.742285482734	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	536	False	NA	NA	False	AATAGA	-18	NA	12937465	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937486_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980745_12980884_12982862_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.49	chrX	+	11837	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-229	-902	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGCTTTGTTTCTTTTC	578	False	NA	NA	False	AATACA	-13	NA	12937507	13038665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.5	chrX	+	12833	44	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	523	5	NA	NA	-167	1037	intron_retention	FALSE	canonical	3	31	junction_2	265.738130348353	1448	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	NA	False	NA	NA	False	AATAGA	-18	NA	12908086	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.50	chrX	+	9409	46	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-156	1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	222.750512047187	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	651	False	NA	NA	False	AATAGA	-10	NA	12937580	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937613_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.51	chrX	+	8363	48	NNC	ENSMUSG00000031010.18	novel	1452	7	NA	NA	-143	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.883631333704	1414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAAGGTGTATATAGTA	664	False	NA	NA	False	AATAAA	-23	NA	12937593	13035950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937613_12938453_12938565_12939546_12939646_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.52	chrX	+	8557	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-67	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	281.577638398586	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	740	False	NA	NA	False	AATAAA	-30	NA	12937669	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.53	chrX	+	10468	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-60	1328	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTTGTATTTTTTACG	747	False	NA	NA	False	NA	NA	NA	12937676	13037465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.54	chrX	+	9679	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-43	1037	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	764	False	NA	NA	False	AATAGA	-18	NA	12937693	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.55	chrX	+	8456	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-39	-167	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGTTTGACTGTTAA	768	False	NA	NA	False	AATAAA	-43	NA	12937697	13035970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.56	chrX	+	9536	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	-42	2393	-26	1037	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	781	False	NA	NA	False	AATAGA	-18	NA	12937710	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.57	chrX	+	8926	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-26	-180	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	781	False	NA	NA	False	AATAAA	-30	NA	12937710	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.58	chrX	+	8332	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-24	-180	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	783	False	NA	NA	False	AATAAA	-30	NA	12937712	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.59	chrX	+	11132	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-19	-901	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTTGTTTCTTTTCA	788	False	NA	NA	False	AATACA	-14	NA	12937717	13038666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.6	chrX	+	9265	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-167	535	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	1440	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGTATTTGATGTGC	NA	False	NA	NA	False	AATACA	-38	NA	12908086	13036672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.60	chrX	+	9639	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	1037	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	789	False	NA	NA	False	AATAGA	-18	NA	12937718	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.61	chrX	+	12513	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	0	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	789	False	NA	NA	False	AATAAA	-16	NA	12937718	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.62	chrX	+	9107	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	22	intron_retention	FALSE	canonical	0	0	junction_15	224.995289206884	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCATGTCACACCAAT	789	False	NA	NA	False	AGTAAA	-23	NA	12937718	13036159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.63	chrX	+	8502	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	-115	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCACAGATCTACAAAACT	789	False	NA	NA	False	NA	NA	NA	12937718	13036022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.65	chrX	+	12101	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	256.347501622118	1458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	789	False	NA	NA	False	AATAAA	-16	NA	12937718	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.66	chrX	+	9057	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-18	455	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACTTGGTAATGGGAATT	789	False	NA	NA	False	AATAAA	-16	NA	12937718	13036592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.68	chrX	+	12046	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	790	False	NA	NA	False	AATAAA	-16	NA	12937719	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.69	chrX	+	10134	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	1037	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	790	False	NA	NA	False	AATAGA	-18	NA	12937719	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.7	chrX	+	8527	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-167	-190	multi-exon	TRUE	canonical	0	0	junction_17	296.048788480346	1424	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGCAAAGGTGTATATA	NA	False	NA	NA	False	AATAAA	-20	NA	12908086	13035947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987762_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.70	chrX	+	8310	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	-306	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTGGAGAGTTTATT	790	False	NA	NA	False	NA	NA	NA	12937719	13035831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.71	chrX	+	9701	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	1037	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	220.868268655245	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	790	False	NA	NA	False	AATAGA	-18	NA	12937719	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.73	chrX	+	10119	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	1037	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	790	False	NA	NA	False	AATAGA	-18	NA	12937719	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.74	chrX	+	9686	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-17	1037	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	790	False	NA	NA	False	AATAGA	-18	NA	12937719	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.77	chrX	+	11143	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-14	-900	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTCTTTTCAT	793	False	NA	NA	False	AATACA	-15	NA	12937722	13038667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.79	chrX	+	9507	46	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-7	1029	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	220.186022363919	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACTTTTTGTCCTG	800	False	NA	NA	False	AATAGA	-10	NA	12937729	13037166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937845_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.8	chrX	+	8528	47	Fusion	ENSMUSG00000031010.18_ENSMUSG00000087424.2	novel	1452	7	NA	NA	-167	-180	multi-exon	FALSE	canonical	0	0	junction_1	274.110971449862	1426	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTATATAGTATATTAAT	NA	False	NA	NA	False	AATAAA	-30	NA	12908086	13035957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_12908342_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.80	chrX	+	9530	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-7	1035	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTCCTGTGGTAT	800	False	NA	NA	False	AATAGA	-16	NA	12937729	13037172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.85	chrX	+	8181	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	257.229007689052	1416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGTGTATATAGTATAT	801	False	NA	NA	False	AATAAA	-26	NA	12937730	13035953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12960272_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997969_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.86	chrX	+	8903	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	-168	intron_retention	FALSE	canonical	3	336	junction_13	184.407752028662	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAATGTTTGACTGTTA	801	False	NA	NA	False	AATAAA	-42	NA	12937730	13035969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.87	chrX	+	9481	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	876	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGGTGATTTGA	801	False	NA	NA	False	AATAAA	-43	NA	12937730	13037013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.88	chrX	+	8935	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	-22	2974	-6	456	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTGGTAATGGGAATTT	801	False	NA	NA	False	AATAAA	-17	NA	12937730	13036593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.91	chrX	+	12516	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	0	intron_retention	FALSE	canonical	3	383	junction_13	181.435749789431	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	801	False	NA	NA	False	AATAAA	-16	NA	12937730	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.94	chrX	+	8472	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-6	-187	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	256.347501622118	1414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAAGGTGTATATAGTA	801	False	NA	NA	False	AATAAA	-23	NA	12937730	13035950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12940135_12940205_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.95	chrX	+	12017	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	804	False	NA	NA	False	AATAAA	-16	NA	12937733	13039567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.96	chrX	+	10165	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1037	intron_retention	FALSE	canonical	3	36	junction_43	216.855670239162	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCTGTGGTATGT	807	False	NA	NA	False	AATAGA	-18	NA	12937736	13037174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
ES.36664.97	chrX	+	9638	47	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	256.836237755841	1438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTTTGTCCTGTGGT	807	False	NA	NA	False	AATAGA	-14	NA	12937736	13037170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12937973_12938453_12938565_12959196_12959218_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36664.98	chrX	+	9957	45	NNC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	884	intron_retention	FALSE	non_canonical	0	0	junction_6	224.014604148705	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGATTTGAATATGTGT	807	False	NA	NA	False	AATAAA	-38	NA	12937736	13037021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971049_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ES.36665.1	chrX	-	1549	1	Intergenic	novelGene_30030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12932683	12931134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_12931100_12932700
ES.36666.1	chrX	-	4330	2	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAACAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	12958519	12952971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_12956839_12958056
ES.36667.1	chrX	-	178	2	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAAAAAATCCAGT	NA	False	NA	NA	False	NA	NA	NA	12995734	12981256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_12981269_12995568
ES.36667.2	chrX	-	163	1	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAATTTTAACT	NA	False	NA	NA	False	NA	NA	NA	12995719	12995556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_12995600_12995700
ES.36668.1	chrX	-	3001	1	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAACAATTATTGTGT	9395	False	NA	NA	False	NA	NA	NA	13004770	13001769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_13001800_13004800
ES.36668.2	chrX	-	5377	3	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAACAATTATTGTGT	5790	False	NA	NA	False	NA	NA	NA	13008375	13001769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_13002808_13003844_13006456_13006647
ES.36669.1	chrX	-	4539	1	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCAAACACACACACCT	NA	False	NA	NA	False	NA	NA	NA	13027993	13023454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_13023500_13028000
ES.3667.1	chr10	-	173	1	Intergenic	novelGene_2804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96584581	96584408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_96584400_96584600
ES.36670.1	chrX	-	180	1	Intergenic	novelGene_30034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAATTTTCGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	13041123	13040943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13040900_13041100
ES.36671.1	chrX	-	335	1	Intergenic	novelGene_30042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCCCCCCGCAAA	NA	False	NA	NA	False	NA	NA	NA	13061311	13060976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13061000_13061300
ES.36671.2	chrX	-	179	1	Intergenic	novelGene_30043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAATTTTCGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	13061313	13061134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13061100_13061300
ES.36672.1	chrX	+	1329	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	-29	-90	-29	90	mono-exon	FALSE	NA	NA	NA	NA	NA	4619	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGAACACAACTCTTGA	NA	False	NA	NA	False	AATAAA	-45	NA	13068780	13070109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13068800_13070100
ES.36672.10	chrX	+	1118	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13068992_13069165
ES.36672.11	chrX	+	828	3	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	88	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGAACACAACTCTT	NA	False	NA	NA	False	AATAAA	-43	NA	13068784	13070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069407_13069535_13069663_13070028
ES.36672.12	chrX	+	1251	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	87	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACTTGAACACAACTCT	NA	False	NA	NA	False	AATAAA	-42	NA	13068784	13070106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069652_13069722
ES.36672.13	chrX	+	1135	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	88	multi-exon	FALSE	canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGAACACAACTCTT	NA	False	NA	NA	False	AATAAA	-43	NA	13068784	13070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13068813_13069000
ES.36672.14	chrX	+	1275	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	88	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGAACACAACTCTT	NA	False	NA	NA	False	AATAAA	-43	NA	13068784	13070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069663_13069710
ES.36672.15	chrX	+	1276	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	86	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACACTTGAACACAACTC	NA	False	NA	NA	False	AATAAA	-41	NA	13068784	13070105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069525_13069569
ES.36672.16	chrX	+	1243	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-24	88	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGAACACAACTCTT	NA	False	NA	NA	False	AATAAA	-43	NA	13068785	13070107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069650_13069728
ES.36672.17	chrX	+	991	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-7	57	multi-exon	FALSE	canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068802	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069363_13069645
ES.36672.2	chrX	+	1208	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069910_13069993
ES.36672.3	chrX	+	1207	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069656_13069740
ES.36672.4	chrX	+	864	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069401_13069828
ES.36672.5	chrX	+	824	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13068912_13069379
ES.36672.6	chrX	+	1214	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069669_13069746
ES.36672.7	chrX	+	1198	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	57	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	13068784	13070076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069568_13069661
ES.36672.8	chrX	+	1204	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	59	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	13068784	13070078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13069657_13069746
ES.36672.9	chrX	+	1208	2	Genic_Genomic	ENSMUSG00000084349.4	novel	1210	1	NA	NA	-25	85	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACACTTGAACACAACT	NA	False	NA	NA	False	AATAAA	-40	NA	13068784	13070104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_13068895_13069006
ES.36673.1	chrX	+	160	1	Intergenic	novelGene_30044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3074	False	NA	NA	False	NA	NA	NA	13075890	13076050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13075900_13076000
ES.36674.1	chrX	+	175	1	Intergenic	novelGene_30045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	9989	False	NA	NA	False	NA	NA	NA	13082805	13082980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13082800_13083000
ES.36675.1	chrX	+	176	1	Intergenic	novelGene_30046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAGTAAGGCCCT	NA	False	NA	NA	False	NA	NA	NA	13083430	13083606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13083400_13083600
ES.36676.1	chrX	-	734	1	FSM	ENSMUSG00000083364.5	ENSMUST00000122000.2	393	1	-53	-288	-53	288	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGTGAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	13084894	13084160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13084200_13084900
ES.36677.1	chrX	-	280	1	Intergenic	novelGene_30047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCACAAACAAGCCA	NA	False	NA	NA	False	NA	NA	NA	13094438	13094158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13094200_13094400
ES.36677.2	chrX	-	176	1	Intergenic	novelGene_30048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTCC	NA	False	NA	NA	False	NA	NA	NA	13094439	13094263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13094300_13094400
ES.36678.1	chrX	-	176	1	Intergenic	novelGene_30049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	13098688	13098512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13098500_13098700
ES.36679.1	chrX	-	227	1	Intergenic	novelGene_30050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCCTCTCAGAGTGCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	13099246	13099019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13099000_13099200
ES.3668.1	chr10	-	958	1	Intergenic	novelGene_2805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTGATGTAAAGATCT	NA	False	NA	NA	False	AATAAA	-18	NA	97110542	97109584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_97109600_97110500
ES.36680.1	chrX	-	3025	2	NNC	ENSMUSG00000100714.7	novel	472	3	NA	NA	-4443	-9	intron_retention	FALSE	canonical	2	5	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACAGCATTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	13106965	13100931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13101739_13104747
ES.36681.1	chrX	-	178	1	Intergenic	novelGene_30051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	13118480	13118302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13118300_13118500
ES.36682.1	chrX	+	5150	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	-458	0	-458	0	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13146750	13160291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.10	chrX	+	5289	14	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	0	-66	intron_retention	FALSE	canonical	3	179	junction_1	104.929562172686	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTGTTGTTGTCAAT	NA	False	NA	15	True	AATAAA	-17	NA	13147260	13160225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.11	chrX	+	5427	15	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	179	junction_1	83.0117092797819	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	16	True	AATAAA	-16	NA	13147260	13160289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13147397_13150416_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401
ES.36682.13	chrX	+	4935	16	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	179	junction_1	101.279283831065	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCGTTTGATTGTCCA	NA	False	NA	17	True	AATAAA	-17	NA	13147261	13160290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.15	chrX	+	4540	17	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	14	-69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	118.270859021781	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	12	True	AATAAA	-14	NA	13147284	13160222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156604_13156695_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.16	chrX	+	4552	17	NNC	ENSMUSG00000000787.13	novel	1003	5	NA	NA	335	-72	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	120.383485552421	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCTCCTTTGTTGTT	NA	False	NA	9	True	AATAAA	-11	NA	13147605	13160219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13147726_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.17	chrX	+	5605	15	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	574	-120	intron_retention	FALSE	canonical	3	213	junction_1	88.4012189407142	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACCTTGGCACAC	NA	False	NA	NA	False	AATAAA	-18	NA	13147844	13158141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.18	chrX	+	8649	12	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	787	0	intron_retention	FALSE	canonical	3	187	junction_1	98.1792928968171	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13148057	13160291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13150475_13151153_13152406_13153463_13153623_13153702_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.19	chrX	+	4718	17	NNC	ENSMUSG00000000787.13	novel	1003	5	NA	NA	957	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.341444254426	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCGTTTGATTGTCCA	NA	False	NA	17	True	AATAAA	-17	NA	13148227	13160290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13148443_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.20	chrX	+	4503	16	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	3206	3	-3108	-3	3prime_fragment	FALSE	canonical	3	187	junction_1	93.8215800809648	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13150414	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.23	chrX	+	4399	16	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	-2365	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	138.773420445784	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCGTTTGATTGTCCA	NA	False	NA	17	True	AATAAA	-17	NA	13151157	13160290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155098_13155136_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157404_13157542_13157651
ES.36682.24	chrX	+	4914	14	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	4478	70	-1836	-70	3prime_fragment	FALSE	canonical	3	219	junction_1	83.7977277233556	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTCCTTTGTTGTTGT	NA	False	NA	11	True	AATAAA	-13	NA	13151686	13160221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.25	chrX	+	7302	2	NIC	ENSMUSG00000000787.13	novel	802	5	NA	NA	-1251	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13152271	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13153803_13154517
ES.36682.27	chrX	+	4193	13	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	-61	-71	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	120.690001196822	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCCTTTGTTGTTG	NA	False	NA	10	True	AATAAA	-12	NA	13153461	13160220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157404_13157542_13157651
ES.36682.28	chrX	+	6622	1	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	145	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	16	True	AATAAA	-16	NA	13153667	13160289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13153700_13160300
ES.36682.29	chrX	+	3334	13	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	226	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	125.288638972397	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13153748	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651_13158745_13159467
ES.36682.30	chrX	+	4289	1	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	-162	-111	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	548	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCACACAGGTGTGAT	NA	False	NA	NA	False	AATAAA	-27	NA	13153861	13158150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13153900_13158200
ES.36682.31	chrX	+	3756	10	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	35	-70	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	140.451476617196	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTCCTTTGTTGTTGT	NA	False	NA	11	True	AATAAA	-13	NA	13154058	13160221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.32	chrX	+	3873	10	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	7304	2	489	-2	3prime_fragment	FALSE	canonical	3	307	junction_1	68.3700894821885	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	16	True	AATAAA	-16	NA	13154512	13160289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.34	chrX	+	1636	9	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	7601	2150	786	-120	3prime_fragment	FALSE	canonical	3	313	junction_1	65.2380257212004	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACCTTGGCACAC	NA	False	NA	NA	False	AATAAA	-18	NA	13154809	13158141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.35	chrX	+	3783	9	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	7601	3	786	-3	3prime_fragment	FALSE	canonical	3	313	junction_1	65.2380257212004	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13154809	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.36	chrX	+	2809	9	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	1029	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.106749930582	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGTTGTTGTCAATT	NA	False	NA	16	True	AATAAA	-18	NA	13155052	13160226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651_13158827_13159603
ES.36682.37	chrX	+	3463	7	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	8421	65	1606	-65	3prime_fragment	FALSE	canonical	3	337	junction_1	56.7528756001746	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTGTTGTTGTCAATT	NA	False	NA	16	True	AATAAA	-18	NA	13155629	13160226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.39	chrX	+	3722	3	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	2289	-64	intron_retention	FALSE	canonical	3	424	junction_2	21.5	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	NA	False	NA	17	True	AATAAA	-19	NA	13156312	13160227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13156600_13156684_13157294_13157401
ES.36682.4	chrX	+	2603	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	12	2077	12	-47	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCAAGTGGTAGCCT	NA	False	NA	NA	False	CATAAA	-11	NA	13147220	13158214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.40	chrX	+	3325	3	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	9334	2	2519	-2	intron_retention	FALSE	canonical	3	406	junction_2	30.5	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCGTTTGATTGTCC	NA	False	NA	16	True	AATAAA	-16	NA	13156542	13160289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13156600_13156684_13156803_13157139
ES.36682.41	chrX	+	2779	2	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	10191	3	3376	-3	3prime_fragment	FALSE	canonical	3	520	junction_1	0	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13157399	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_13157542_13157651
ES.36682.5	chrX	+	5726	16	NIC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	21	-3	combination_of_known_junctions	FALSE	canonical	3	179	junction_1	97.5012250635288	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTCGTTTGATTGTC	NA	False	NA	15	True	AATAAA	-15	NA	13147229	13160288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36682.6	chrX	+	4235	18	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	21	-69	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	121.780675281312	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTCCTTTGTTGTTGTC	NA	False	NA	12	True	AATAAA	-14	NA	13147229	13160222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651_13158830_13159196
ES.36682.7	chrX	+	4472	17	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	-4	-72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130.823816997327	658	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCTCCTTTGTTGTT	NA	False	NA	9	True	AATAAA	-11	NA	13147256	13160219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13147397_13150416_13150471_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157747
ES.36682.9	chrX	+	3225	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	52	1415	0	615	multi-exon	FALSE	canonical	3	179	junction_1	98.1322449554681	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTCCAGAAGAGTAACAA	NA	False	NA	NA	False	NA	NA	NA	13147260	13158876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ES.36683.1	chrX	-	181	1	Intergenic	novelGene_30052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCTTGAAGCA	NA	False	NA	NA	False	NA	NA	NA	13171384	13171203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13171200_13171400
ES.36684.1	chrX	-	1729	1	Intergenic	novelGene_30053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCTGTCTCTGTATCA	4823	False	NA	NA	False	AATAAA	-17	NA	13213815	13212086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13212100_13213800
ES.36685.1	chrX	+	4294	2	NNC	ENSMUSG00000051228.6	novel	5183	3	NA	NA	19884	3501	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGTGTGTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	13352232	13359053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_13354065_13356591
ES.36686.1	chrX	+	188	1	Intergenic	novelGene_30054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCCCAAACTGATTAGA	NA	False	NA	NA	False	NA	NA	NA	13534676	13534864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13534700_13534900
ES.36687.1	chrX	+	220	1	Intergenic	novelGene_30055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTATTATCTAATG	NA	False	NA	NA	False	NA	NA	NA	13566206	13566426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_13566200_13566400
ES.36688.1	chrX	-	8409	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-43	0	-43	0	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACGTGTCTCCTCAGATT	NA	False	NA	NA	False	AATAAA	-19	NA	13712860	13383318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.10	chrX	-	4457	26	NIC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-7	339	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	35.0347484649169	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	False	NA	NA	False	AATATA	-23	NA	13712802	13387230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.11	chrX	-	4181	24	NNC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	81	339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.004887587442	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	False	NA	NA	False	AATATA	-23	NA	13712699	13387230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399752_13404007_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.12	chrX	-	4699	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-22	336	intron_retention	FALSE	canonical	1	1	junction_3	54.890640367917	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGCCTTTGGGTC	NA	False	NA	NA	False	AATATA	-20	NA	13712996	13387233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.13	chrX	-	4554	24	NIC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-51	336	intron_retention	FALSE	canonical	2	6	junction_7	33.2138058615836	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGCCTTTGGGTC	NA	False	NA	NA	False	AATATA	-20	NA	13713025	13387233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.14	chrX	-	4686	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-18	336	intron_retention	FALSE	canonical	0	0	junction_24	44.4261904736384	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAATGCCTTTGGGTC	NA	False	NA	NA	False	AATATA	-20	NA	13712992	13387233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13654553_13654650_13712246
ES.36688.16	chrX	-	4395	25	NIC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-51	335	intron_retention	FALSE	canonical	0	0	junction_23	36.3438201609144	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAAATGCCTTTGGGT	NA	False	NA	NA	False	AATATA	-19	NA	13712868	13387234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13652175_13652289_13712246
ES.36688.18	chrX	-	4676	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-49	334	intron_retention	FALSE	canonical	1	1	junction_19	35.4713179907372	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13713023	13387235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480853_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.19	chrX	-	4548	27	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-22	334	intron_retention	FALSE	non_canonical	0	0	junction_1	35.0173245373127	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13712996	13387235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13387916_13387995_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.2	chrX	-	8478	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-174	-4247	5	-4	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCACGTGTCTCCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	13712969	13383322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.20	chrX	-	3913	25	NIC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	9	315	combination_of_known_junctions	FALSE	canonical	2	4	junction_23	35.8248051867232	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATTGTATGTGTTCA	NA	False	NA	NA	False	TTTAAA	-41	NA	13712318	13387254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.21	chrX	-	4361	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-42	4047	-42	204	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGCATTTGCTACAAA	NA	False	NA	NA	False	AATATA	-20	NA	13712859	13387365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.22	chrX	-	4495	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-243	-195	-64	195	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCAGTTTAGGCATT	NA	False	NA	NA	False	AATATA	-11	NA	13713038	13387374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.23	chrX	-	4358	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-219	4227	-62	24	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCAATTTAATTTG	NA	False	NA	1	True	NA	NA	NA	13713036	13387545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.24	chrX	-	4339	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-258	-24	-79	24	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCAATTTAATTTG	NA	False	NA	1	True	NA	NA	NA	13713053	13387545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.25	chrX	-	4141	26	NIC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-8	22	combination_of_known_junctions	FALSE	canonical	2	4	junction_24	35.0347484649169	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTCAATTTAATT	NA	False	NA	-1	True	NA	NA	NA	13712803	13387547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.26	chrX	-	4426	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-48	22	intron_retention	FALSE	canonical	1	1	junction_3	43.8045842349862	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTCAATTTAATT	NA	False	NA	-1	True	NA	NA	NA	13713022	13387547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.27	chrX	-	4346	25	NIC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-70	22	intron_retention	FALSE	canonical	2	4	junction_23	35.8248051867232	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTCAATTTAATT	NA	False	NA	-1	True	NA	NA	NA	13713044	13387547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.28	chrX	-	4143	25	NIC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-57	22	intron_retention	FALSE	canonical	2	3	junction_8	43.4021088837346	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTCAATTTAATT	NA	False	NA	-1	True	NA	NA	NA	13712874	13387547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.3	chrX	-	4761	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-280	3885	-123	366	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGATTTGTTCAGGTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	13713097	13387203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.30	chrX	-	4194	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-164	4230	30	21	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTGTCTCAATTTAAT	NA	False	NA	-2	True	NA	NA	NA	13712944	13387548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.32	chrX	-	4229	27	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-40	13	intron_retention	FALSE	canonical	0	0	junction_9	43.4917696083827	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGTAATTTTGTCTC	NA	False	NA	-10	True	NA	NA	NA	13712857	13387556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13420293_13420355_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.33	chrX	-	4180	24	NIC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-51	-1	intron_retention	FALSE	canonical	0	0	junction_22	37.1888858735265	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTAGTGAAATGTGTT	NA	False	NA	-24	True	TATAAA	-35	NA	13713025	13387570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13652175_13652289_13712246
ES.36688.35	chrX	-	4220	27	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	42.7652357016232	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATCATGTAGTGAA	NA	False	NA	-31	True	TATAAA	-28	NA	13712810	13387577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.37	chrX	-	4288	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-250	4328	-93	-77	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCTATGCACATCCCTT	NA	False	NA	-100	True	AATAAA	-21	NA	13713067	13387646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.38	chrX	-	3732	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	193	4335	193	-84	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGTAAACCTATGCAC	NA	False	NA	-107	True	AATAAA	-14	NA	13712587	13387653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.39	chrX	-	3947	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	22	88	7	-88	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTAAGTTGTAAACCTAT	NA	False	NA	-111	True	AATAAA	-10	NA	13712773	13387657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.4	chrX	-	4690	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-268	-365	-89	365	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGATTTGTTCAGGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	13713063	13387204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.40	chrX	-	4074	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-196	4488	-39	214	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGGGTCTTGACTCTT	NA	False	NA	NA	False	NA	NA	NA	13713013	13387806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.41	chrX	-	3791	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-43	0	intron_retention	FALSE	canonical	1	1	junction_3	43.8045842349862	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGGTGGAACACTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	13712860	13388020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.43	chrX	-	3892	26	NIC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-54	-1	intron_retention	FALSE	canonical	2	4	junction_24	35.0347484649169	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGTGGAACACTACA	NA	False	NA	NA	False	AATAAA	-20	NA	13713028	13388021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.44	chrX	-	3861	25	NIC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-59	-1	intron_retention	FALSE	canonical	2	4	junction_23	35.8248051867232	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGTGGAACACTACA	NA	False	NA	NA	False	AATAAA	-20	NA	13713033	13388021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652157_13652289_13712246
ES.36688.45	chrX	-	3827	26	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_25	35.6168499449348	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGTGGAACACTACA	NA	False	NA	NA	False	AATAAA	-20	NA	13712992	13388021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712257
ES.36688.46	chrX	-	3882	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-219	4703	-62	-1	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGGGTGGAACACTACA	NA	False	NA	NA	False	AATAAA	-20	NA	13713036	13388021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.47	chrX	-	3777	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-221	4704	-27	-2	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGGGTGGAACACTAC	NA	False	NA	NA	False	AATAAA	-19	NA	13713001	13388022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.48	chrX	-	3844	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-241	454	-62	-3	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGGGGTGGAACACTA	NA	False	NA	NA	False	AATAAA	-18	NA	13713036	13388023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.5	chrX	-	4598	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-245	3907	-51	344	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGGTCCTTCATTT	NA	False	NA	NA	False	ATTAAA	-1	NA	13713025	13387225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.50	chrX	-	3715	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	-249	591	-70	-140	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATTCAATCCTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	13713044	13388160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.52	chrX	-	3756	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-234	4844	-77	-142	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTATTCAATCCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	13713051	13388162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.53	chrX	-	2567	17	FSM	ENSMUSG00000031012.18	ENSMUST00000152358.8	2525	17	-21	-21	-21	21	multi-exon	FALSE	canonical	3	118	junction_11	14.6926852549151	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTGTTTCCAGGAA	NA	False	NA	NA	False	AAAAAG	-33	NA	13712838	13420801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36688.54	chrX	-	8208	1	Genic_Genomic	ENSMUSG00000031012.18	novel	NA	NA	NA	NA	-50	7669	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATGCTACGAAAGATA	NA	False	NA	NA	False	NA	NA	NA	13712867	13704659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_13704700_13712900
ES.36688.6	chrX	-	4763	27	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-54	341	intron_retention	FALSE	canonical	0	0	junction_25	43.3801995843303	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTTGGGTCCTTCA	NA	False	NA	NA	False	AATATA	-25	NA	13713028	13387228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13654553_13654650_13712246
ES.36688.7	chrX	-	3196	18	NNC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-49486	340	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	51.4199751150314	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCCTTTGGGTCCTTC	NA	False	NA	NA	False	AATATA	-24	NA	13475056	13387229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972
ES.36688.8	chrX	-	7516	25	NNC	ENSMUSG00000031012.18	novel	4057	25	NA	NA	-39	340	intron_retention	FALSE	canonical	0	0	junction_23	43.4980842490027	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGCCTTTGGGTCCTTC	NA	False	NA	NA	False	AATATA	-24	NA	13712856	13387229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13685954_13686002_13712246
ES.36688.9	chrX	-	4505	27	NNC	ENSMUSG00000031012.18	novel	8366	26	NA	NA	-48	339	intron_retention	FALSE	non_canonical	0	0	junction_1	35.0173245373127	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	False	NA	NA	False	AATATA	-23	NA	13713022	13387230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_13387924_13388077_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ES.36689.1	chrX	-	175	1	Intergenic	novelGene_30056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	13887844	13887669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_13887700_13887800
ES.3669.1	chr10	+	3995	1	Intergenic	novelGene_2806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTAGTGTCACTGTAC	NA	False	NA	NA	False	NA	NA	NA	97140505	97144500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_97140500_97144500
ES.36690.1	chrX	+	6822	1	Intergenic	novelGene_30057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14056965	14063787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_14057000_14063800
ES.36691.1	chrX	+	3560	1	Intergenic	novelGene_30058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGCAAGAGTTTTACA	NA	False	NA	NA	False	NA	NA	NA	14355552	14359112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_14355600_14359100
ES.36692.1	chrX	+	171	1	Intergenic	novelGene_30059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	15299133	15299304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_15299100_15299300
ES.36693.1	chrX	-	4936	3	Intergenic	novelGene_30060	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCACTGCTTTTACAGAT	NA	False	NA	NA	False	AATAAA	-16	NA	15712452	15585580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_15590232_15711700_15711784_15712250
ES.36694.1	chrX	+	2799	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1129	47396	-1129	-47396	5prime_fragment	FALSE	canonical	3	229	junction_2	15	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	16484807	16506661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_16486153_16500420_16500516_16505302
ES.36694.10	chrX	+	1955	15	NNC	ENSMUSG00000025037.7	novel	4167	15	NA	NA	134	-2079	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	66.1690784186655	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTGTGTAGCATC	NA	False	NA	5	True	AATAAA	-15	NA	16486070	16551978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550201_16550315_16551220_16551284_16551470
ES.36694.11	chrX	+	3614	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	419	134	-419	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCACTATATGTGAGGCT	NA	False	NA	NA	False	NA	NA	NA	16486070	16553638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.12	chrX	+	5303	11	NIC	ENSMUSG00000025037.7	novel	4167	15	NA	NA	19394	-2077	intron_retention	FALSE	canonical	3	197	junction_3	25.5595383369888	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTGTAGCATCCA	NA	False	NA	7	True	AATAAA	-17	NA	16505330	16551980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_16505441_16524806_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.13	chrX	+	1608	4	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	61590	2165	61590	-2165	3prime_fragment	FALSE	canonical	3	263	junction_2	13.8884444373331	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTCTGGATTCTGTT	NA	False	NA	8	True	AATAAA	-42	NA	16547526	16551892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.14	chrX	+	1673	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	63280	2075	63280	-2075	3prime_fragment	FALSE	canonical	3	263	junction_1	17	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTGTAGCATCCAAT	NA	False	NA	9	True	AATAAA	-19	NA	16549216	16551982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_16550315_16551220_16551284_16551470
ES.36694.2	chrX	+	3223	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1129	2073	-1129	-2073	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTAGCATCCAATGT	NA	False	NA	11	True	AATAAA	-21	NA	16484807	16551984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.3	chrX	+	4030	15	NNC	ENSMUSG00000025037.7	novel	4167	15	NA	NA	-1125	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0818872113534	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGCTTCTCTGATTTGG	NA	False	NA	22	True	AATAAA	-23	NA	16484811	16554058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_16484890_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.4	chrX	+	3045	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1065	2187	-1065	-2187	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAAGTGCTTATGA	NA	False	NA	-14	True	AATAAA	-20	NA	16484871	16551870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.5	chrX	+	5230	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	-1065	2	-1065	-2	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATAGGCTTCTCTGATT	NA	False	NA	19	True	AATAAA	-20	NA	16484871	16554055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.6	chrX	+	4113	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	54	0	54	0	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGGCTTCTCTGATTTG	NA	False	NA	21	True	AATAAA	-22	NA	16485990	16554057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.7	chrX	+	2751	14	NIC	ENSMUSG00000025037.7	novel	4167	15	NA	NA	112	-2076	intron_retention	FALSE	canonical	3	197	junction_6	23.9923557845968	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTGTGTAGCATCCAA	NA	False	NA	8	True	AATAAA	-18	NA	16486048	16551981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.8	chrX	+	3925	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	108	134	-108	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGGCATATGCATATGT	NA	False	NA	5	True	AATAAA	-18	NA	16486070	16553949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ES.36694.9	chrX	+	1859	15	NNC	ENSMUSG00000025037.7	novel	4167	15	NA	NA	134	-2165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	66.1690784186655	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTCTGGATTCTGTT	NA	False	NA	8	True	AATAAA	-42	NA	16486070	16551892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548529_16550202_16550315_16551220_16551284_16551470
ES.36695.1	chrX	-	4450	2	Antisense	novelGene_ENSMUSG00000025037.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTCGTGACCTCAAGGG	NA	False	NA	NA	False	NA	NA	NA	16524461	16519637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_16520211_16520584
ES.36696.1	chrX	-	2429	15	FSM	ENSMUSG00000040147.15	ENSMUST00000040820.13	2411	15	-20	2	-20	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.479157423749955	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTTTGCTGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	16683625	16575522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_16576431_16577486_16577550_16578804_16578917_16582624_16582723_16584494_16584553_16589174_16589229_16590898_16590996_16598257_16598418_16600312_16600463_16602210_16602353_16605332_16605425_16606309_16606415_16634616_16634755_16637163_16637259_16683468
ES.36697.1	chrX	+	152	1	Intergenic	novelGene_30061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	16987264	16987416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_16987300_16987400
ES.36698.1	chrX	-	2155	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	31.8576477823179	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTTTATTGTATGTAT	NA	False	NA	-4	True	ATTAAA	-22	NA	17117553	16998282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
ES.36698.2	chrX	-	2872	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	67895	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	30.7834582491173	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACCATTTTATTGTAT	NA	False	NA	-8	True	ATTAAA	-18	NA	17117712	16998286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117079
ES.36698.3	chrX	-	2129	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68064	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	30.7679486912382	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACCATTTTATTGTAT	NA	False	NA	-8	True	ATTAAA	-18	NA	17117543	16998286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
ES.36698.4	chrX	-	2444	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	67896	-3	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTTGACCATTTTATT	NA	False	NA	-12	True	ATTAAA	-14	NA	17117711	16998290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
ES.36698.5	chrX	-	4210	1	NIC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	183104	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGTTGACCATTTT	NA	False	NA	-15	True	ATTAAA	-11	NA	17002503	16998293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_16998300_17002500
ES.36698.6	chrX	-	937	5	NIC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	114419	-6	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	52.9598904832704	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGTTGACCATTTT	NA	False	NA	-15	True	ATTAAA	-11	NA	17071188	16998293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_16998612_17027489_17027583_17028929_17029128_17067284_17067416_17070991
ES.36698.7	chrX	-	2193	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68029	-121	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTTTGTATTAAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	17117578	16998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
ES.36698.8	chrX	-	1904	12	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68061	-121	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.3795174308488	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTTTGTATTAAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	17117546	16998408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
ES.36698.9	chrX	-	2169	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68053	-143	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	30.5403022115302	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAAAATAAGA	NA	False	NA	NA	False	AATAAA	-14	NA	17117554	16998430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109839_17117502
ES.36699.1	chrX	+	624	1	Intergenic	novelGene_30062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAGTACACTTAG	NA	False	NA	NA	False	AATAAA	-11	NA	17183570	17184194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_17183600_17184200
ES.367.1	chr1	+	5308	14	NNC	ENSMUSG00000026072.13	novel	4832	11	NA	NA	-41	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.01767339209292	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGTTAAAGCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	40305704	40355324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40306042_40310895_40311082_40315261_40315338_40316281_40316492_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ES.367.2	chr1	+	5121	13	NNC	ENSMUSG00000026072.13	novel	4832	11	NA	NA	-36	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.08166599946613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGTTAAAGCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	40305709	40355324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40306042_40315257_40315338_40316281_40316492_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ES.367.3	chr1	+	4993	12	NNC	ENSMUSG00000026072.13	novel	4832	11	NA	NA	-12	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.04898684901539	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGTTAAAGCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	40305733	40355324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_40306042_40310895_40311082_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ES.367.4	chr1	+	4780	11	FSM	ENSMUSG00000026072.13	ENSMUST00000114795.3	4832	11	21	31	21	-31	multi-exon	FALSE	canonical	0	0	junction_3	2.01246117974981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAAAGCCTCTTTTGAG	NA	False	NA	NA	False	AATAAA	-22	NA	40305766	40355330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_40306042_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ES.367.5	chr1	+	4041	7	ISM	ENSMUSG00000026072.13	ENSMUST00000114795.3	4832	11	28170	5	28099	-5	3prime_fragment	FALSE	canonical	1	1	junction_6	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTTGGTTGCTCTGTC	8318	False	NA	NA	False	AATAAA	-27	NA	40333915	40355356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ES.3670.1	chr10	+	85	1	Intergenic	novelGene_2807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	5750	False	NA	NA	False	NA	NA	NA	97399234	97399319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_97399200_97399300
ES.36700.1	chrX	-	1748	1	Intergenic	novelGene_30063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	17351860	17350112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_17350100_17351900
ES.36701.1	chrX	-	7846	1	Intergenic	novelGene_30064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	17369855	17362009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_17362000_17369900
ES.36702.1	chrX	-	2921	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	26	-964	26	964	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGCGTCAGAAGTATT	NA	False	NA	NA	False	ACTAAA	-16	NA	17438538	17421838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ES.36702.2	chrX	-	2015	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	-34	2	-34	-2	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATTGTGCTTATATAT	NA	False	NA	-11	True	AATAAA	-19	NA	17438598	17422804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ES.36702.3	chrX	-	1788	5	NIC	ENSMUSG00000025040.14	novel	1983	5	NA	NA	62	-8	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	100.367761258285	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAAGTGATTGTGCTT	NA	False	NA	-17	True	AATAAA	-13	NA	17438430	17422810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_17424251_17424919_17425049_17434271_17434348_17437594_17437699_17438391
ES.36702.5	chrX	-	1085	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	134	764	62	196	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTACGCGACTAAAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	17438430	17423566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ES.36702.6	chrX	-	1071	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	24	888	24	72	multi-exon	FALSE	canonical	3	209	junction_3	21.435951110226	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACAATAGAATTATTAAG	NA	False	NA	50	True	AATAAA	-31	NA	17438540	17423690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ES.36702.7	chrX	-	957	5	NNC	ENSMUSG00000025040.14	novel	1983	5	NA	NA	-12333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.248393302923	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATGGCTGATTTTTT	NA	False	NA	-22	True	ATTAAA	-18	NA	17450897	17423762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17450790
ES.36703.1	chrX	+	1941	1	Intergenic	novelGene_30065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	17565903	17567844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_17565900_17567800
ES.36704.1	chrX	+	162	1	Intergenic	novelGene_30066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	17633638	17633800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_17633600_17633800
ES.36705.1	chrX	-	3634	1	Intergenic	novelGene_30067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	17645097	17641463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_17641500_17645100
ES.36706.1	chrX	+	4250	1	Intergenic	novelGene_30068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAATATCTAGCAGAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	17707871	17712121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_17707900_17712100
ES.36707.1	chrX	-	6174	1	Intergenic	novelGene_30069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGGAAAACACAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	17714547	17708373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_17708400_17714500
ES.36708.1	chrX	-	196	1	Intergenic	novelGene_30070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	17773393	17773197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_17773200_17773400
ES.36709.1	chrX	+	5544	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	-40	414	-40	-414	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028773	18145761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.11	chrX	+	5444	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	4	-422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	47.1025124985225	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028817	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112252_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.13	chrX	+	5576	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	5	-375	combination_of_known_junctions	FALSE	canonical	3	24	junction_28	53.1090522281412	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATTTTTGTTCACTTTT	NA	False	NA	49	True	AAAAAG	-16	NA	18028818	18145800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.15	chrX	+	5712	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	14	-144	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	47.1025124985225	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATGTCAGACTGGTTT	NA	False	NA	6	True	AATATA	-22	NA	18028827	18146031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112252_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.16	chrX	+	6837	28	NNC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	20	-144	intron_retention	FALSE	canonical	0	0	junction_20	47.9037100034931	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATGTCAGACTGGTTT	NA	False	NA	6	True	AATATA	-22	NA	18028833	18146031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128679_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.17	chrX	+	6838	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	21	884	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	57.8536484835411	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTGCTTAGGAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	18028834	18147059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.18	chrX	+	5373	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	22	-414	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	48.294648915326	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028835	18145761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.19	chrX	+	5654	30	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	22	-422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	57.2498331937608	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028835	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130776_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.2	chrX	+	5473	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-38	-419	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.3232712670962	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028775	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.20	chrX	+	5751	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	23	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	47.4508876070182	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTAAAATGTCAGACTG	NA	False	NA	2	True	AATATA	-18	NA	18028836	18146027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130256_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.21	chrX	+	5201	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	25	341	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAACAGCAACGTCACAA	NA	False	NA	NA	False	AATAAA	-16	NA	18028838	18145462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.22	chrX	+	5493	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	26	416	26	-416	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTATTGTTTGAGTTTT	NA	False	NA	8	True	ATTAAA	-21	NA	18028839	18145759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.23	chrX	+	9024	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	29	-422	intron_retention	FALSE	canonical	3	111	junction_13	32.9368185956748	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028842	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.24	chrX	+	5339	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	30	-414	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028843	18145761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.25	chrX	+	5622	28	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	30	-148	combination_of_known_junctions	FALSE	canonical	3	24	junction_27	50.7834910474158	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTAAAATGTCAGACTG	NA	False	NA	2	True	AATATA	-18	NA	18028843	18146027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.26	chrX	+	5172	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	32	714	-30	340	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAACAGCAACGTCACA	NA	False	NA	NA	False	AATAAA	-15	NA	18028845	18145461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.27	chrX	+	5637	30	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-30	-422	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	55.0636643746478	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028845	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.28	chrX	+	9735	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-27	-419	intron_retention	FALSE	canonical	3	16	junction_12	47.7100294862647	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028848	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.29	chrX	+	5627	31	NNC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-27	54282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	62.3509868049861	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGCATATTGTGACC	NA	False	NA	NA	False	NA	NA	NA	18028848	18200457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864_18145720_18200430
ES.36709.3	chrX	+	5535	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-15	-419	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028798	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.31	chrX	+	5854	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	55.6776779915489	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGACTCATCATTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	18028850	18146175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112252_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.32	chrX	+	5425	29	NNC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-23	-423	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	55.0833667808928	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGTTTTCTATTGTTT	NA	False	NA	1	True	ATTAAA	-14	NA	18028852	18145752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112252_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.33	chrX	+	5359	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-23	-421	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	47.2446860149684	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTTCTATTGTTTGA	NA	False	NA	3	True	ATTAAA	-16	NA	18028852	18145754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.34	chrX	+	5760	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-23	-140	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTGGTTTATTG	NA	False	NA	10	True	AATATA	-26	NA	18028852	18146035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.35	chrX	+	5894	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGACTCATCATTTTT	NA	False	NA	NA	False	AATACA	-16	NA	18028857	18146174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.36	chrX	+	6555	28	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-18	-419	intron_retention	FALSE	canonical	3	35	junction_12	45.2689569534006	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028857	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.37	chrX	+	6757	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	45	-884	-17	884	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTGCTTAGGAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	18028858	18147059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.38	chrX	+	5376	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-17	-419	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	56.0313942962015	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028858	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.39	chrX	+	6745	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-17	716	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACACCTAACTGTTC	NA	False	NA	NA	False	AATAAA	-26	NA	18028858	18146891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.4	chrX	+	5931	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	-14	1	-14	-1	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGACTCATCATTTTT	NA	False	NA	NA	False	AATACA	-16	NA	18028799	18146174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.40	chrX	+	5432	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-17	-447	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.4508876070182	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTATTAAAATTGTTTAA	NA	False	NA	-23	True	AATAAA	-23	NA	18028858	18145728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121028_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.41	chrX	+	9147	27	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-16	-149	intron_retention	FALSE	canonical	0	0	junction_14	54.5268648840445	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCTAAAATGTCAGACT	NA	False	NA	1	True	AATATA	-17	NA	18028859	18146026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116096_18116945_18117342_18120242_18121022_18124074_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.42	chrX	+	5762	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-16	-266	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTTCTTGTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	18028859	18145909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.43	chrX	+	5112	28	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	-16	412	combination_of_known_junctions	FALSE	canonical	3	24	junction_27	50.7834910474158	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCTAATCTTGATG	NA	False	NA	NA	False	AATAAA	-19	NA	18028859	18145533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.46	chrX	+	5388	26	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-6	-138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	64.6676920880899	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTGGTTTATTGTT	NA	False	NA	12	True	AATATA	-28	NA	18028869	18146037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112435_18112656_18114508_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.48	chrX	+	8460	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-3	-145	intron_retention	FALSE	canonical	3	111	junction_12	33.1522654177955	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAATGTCAGACTGGTT	NA	False	NA	5	True	AATATA	-21	NA	18028872	18146030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.49	chrX	+	5001	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-2	332	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATTAACAGCA	NA	False	NA	NA	False	AATAAA	-7	NA	18028873	18145453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.5	chrX	+	5494	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	474	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGAATGGAATGCTG	NA	False	NA	NA	False	TATAAA	-22	NA	18028813	18145595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.50	chrX	+	5867	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-2	-147	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAATGTCAGACTGG	NA	False	NA	3	True	AATATA	-19	NA	18028873	18146028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.51	chrX	+	6757	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	64	-886	2	886	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGCTTAGGAACTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	18028877	18147061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.52	chrX	+	5890	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	24	junction_28	53.1090522281412	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGACTCATCATTTT	NA	False	NA	NA	False	AATACA	-15	NA	18028877	18146173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.53	chrX	+	5588	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	68	262	0	-262	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTTTTAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	18028881	18145913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.55	chrX	+	5324	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-415	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	48.2523658417683	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATTGTTTGAGTTTTA	NA	False	NA	9	True	ATTAAA	-22	NA	18028886	18145760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.56	chrX	+	5819	30	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.3084455376832	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAATGTCAGACTGG	NA	False	NA	3	True	AATATA	-19	NA	18028886	18146028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18041236_18041308_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.59	chrX	+	5226	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	12	474	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	55.6776779915489	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGAATGGAATGCTG	NA	False	NA	NA	False	TATAAA	-22	NA	18028898	18145595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112252_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.6	chrX	+	5340	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	0	578	0	476	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGGAATGCTGTT	NA	False	NA	NA	False	TATAAA	-24	NA	18028813	18145597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.60	chrX	+	5425	29	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	15	-424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	55.8951277494063	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTTTTCTATTGTT	NA	False	NA	0	True	ATTAAA	-13	NA	18028901	18145751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121028_18124082_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.61	chrX	+	4767	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	91	1060	18	-6	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATAATTACCACGTTT	NA	False	NA	NA	False	NA	NA	NA	18028904	18145115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.63	chrX	+	5185	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	103	647	30	407	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTGTTTCTAATCT	NA	False	NA	NA	False	AATAAA	-14	NA	18028916	18145528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.64	chrX	+	5604	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	65	-147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	56.5478298829573	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAAAATGTCAGACTGG	NA	False	NA	3	True	AATATA	-19	NA	18028951	18146028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.65	chrX	+	6432	28	ISM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	143	422	70	-422	intron_retention	FALSE	canonical	3	111	junction_13	33.0146909976987	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18028956	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.66	chrX	+	5554	28	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	73	-138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	65.3724582606451	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTGGTTTATTGTT	NA	False	NA	12	True	AATATA	-28	NA	18028959	18146037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105178_18107943_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.67	chrX	+	5776	30	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	219	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.5685911524423	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGACTCATCATTTT	NA	False	NA	NA	False	AATACA	-15	NA	18029105	18146173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107944_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.68	chrX	+	5337	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	228	-145	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAATGTCAGACTGGTT	NA	False	NA	5	True	AATATA	-21	NA	18029114	18146030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.69	chrX	+	5958	27	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	412	-419	intron_retention	FALSE	canonical	3	25	junction_12	41.505399948104	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18029298	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.7	chrX	+	5655	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-419	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18028813	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.70	chrX	+	5945	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	413	332	intron_retention	FALSE	canonical	3	16	junction_13	48.2355376443213	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATTAACAGCA	NA	False	NA	NA	False	AATAAA	-7	NA	18029299	18145453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.71	chrX	+	5300	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	486	149	413	-149	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCTAAAATGTCAGACT	NA	False	NA	1	True	AATATA	-17	NA	18029299	18146026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.72	chrX	+	3890	27	ISM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	486	4835	413	-3159	5prime_fragment	FALSE	canonical	3	111	junction_13	33.3618541692375	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCATATGGCACGGGCG	NA	False	NA	NA	False	NA	NA	NA	18029299	18141340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273
ES.36709.75	chrX	+	5077	28	ISM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	630	422	557	-422	3prime_fragment	FALSE	canonical	3	111	junction_12	33.1460582829726	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18029443	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.76	chrX	+	5350	28	ISM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	630	149	557	-149	3prime_fragment	FALSE	canonical	3	111	junction_12	33.1460582829726	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCTAAAATGTCAGACT	NA	False	NA	1	True	AATATA	-17	NA	18029443	18146026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.77	chrX	+	5041	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	602	468	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	56.0187992315699	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATATTTGTGAATGGA	NA	False	NA	NA	False	TATAAA	-16	NA	18029488	18145589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.79	chrX	+	4997	28	NNC	ENSMUSG00000037369.18	novel	3219	17	NA	NA	961	-419	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	55.0607844684634	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTCTATTGTTTGAGT	NA	False	NA	5	True	ATTAAA	-18	NA	18029847	18145756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18029991_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ES.36709.8	chrX	+	5306	27	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	1	-452	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	57.6536922048542	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTTTTATTAAAATTG	NA	False	NA	-28	True	AATAAA	-18	NA	18028814	18145723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.80	chrX	+	2606	1	Intergenic	novelGene_30072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGGTCTGTAAAACT	NA	False	NA	NA	False	AGTAAA	-16	NA	18075849	18078455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_18075800_18078500
ES.36709.81	chrX	+	5962	1	Intergenic	novelGene_30074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATAAGATATTCACTT	NA	False	NA	NA	False	AATAAA	-1	NA	18089233	18095195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_18089200_18095200
ES.36709.82	chrX	+	4245	20	NNC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-4304	-422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.7556838751569	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18107979	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_18108068_18112252_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.83	chrX	+	4342	20	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	-81	-422	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	57.9375439828966	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTCTATTGTTTG	NA	False	NA	2	True	ATTAAA	-15	NA	18112202	18145753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.86	chrX	+	5012	11	ISM	ENSMUSG00000037369.18	ENSMUST00000225336.2	3219	17	12224	-408	11002	408	3prime_fragment	FALSE	canonical	3	180	junction_1	25.8079445132696	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGTTTCTAATCTT	NA	False	NA	NA	False	AATAAA	-15	NA	18124758	18145529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.36709.87	chrX	+	3039	9	ISM	ENSMUSG00000037369.18	ENSMUST00000225336.2	3219	17	15939	-470	-12277	470	intron_retention	FALSE	canonical	3	182	junction_2	25.9033660940041	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTGTGAATGGAAT	NA	False	NA	NA	False	TATAAA	-18	NA	18128473	18145591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614
ES.36709.9	chrX	+	5202	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	1	474	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGAATGGAATGCTG	NA	False	NA	NA	False	TATAAA	-22	NA	18028814	18145595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ES.3671.1	chr10	-	3282	1	Antisense	novelGene_ENSMUSG00000019936.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTGTTATTCTCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	97512729	97509447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_97509400_97512700
ES.36710.1	chrX	-	3586	1	Intergenic	novelGene_30071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTAATAAAATGCAATAA	NA	False	NA	NA	False	NA	NA	NA	18039125	18035539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_18035500_18039100
ES.36711.1	chrX	-	175	1	Intergenic	novelGene_30073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	18077764	18077589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_18077600_18077800
ES.36712.1	chrX	-	3373	1	Intergenic	novelGene_30075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18096472	18093099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_18093100_18096500
ES.36713.1	chrX	-	4200	1	Antisense	novelGene_ENSMUSG00000037369.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAACAGCTCCAAGGAT	2149	False	NA	NA	False	NA	NA	NA	18144946	18140746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_18140700_18144900
ES.36714.1	chrX	-	3956	2	Intergenic	novelGene_30076	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTAATTTTTTTTTCCT	NA	False	NA	NA	False	AATAAA	-32	NA	18744846	18673466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_18677331_18744754
ES.36715.1	chrX	-	175	1	Intergenic	novelGene_30077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTGAA	NA	False	NA	NA	False	NA	NA	NA	18914350	18914175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_18914200_18914400
ES.36716.1	chrX	-	944	1	FSM	ENSMUSG00000065422.3	ENSMUST00000083488.3	95	1	84	-933	84	933	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTATGAGTTTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	19012543	19011599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_19011600_19012500
ES.36717.1	chrX	-	2611	1	Intergenic	novelGene_30078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGGAATTGGTAAAT	NA	False	NA	NA	False	NA	NA	NA	19087584	19084973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_19085000_19087600
ES.36718.1	chrX	+	3316	1	Antisense	novelGene_ENSMUSG00000097497.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19098951	19102267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_19099000_19102300
ES.36719.1	chrX	+	3769	1	Intergenic	novelGene_30079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTTGTGTCCTGTATT	NA	False	NA	NA	False	NA	NA	NA	19404081	19407850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_19404100_19407800
ES.3672.1	chr10	+	143	1	Intergenic	novelGene_2808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	98696678	98696821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_98696700_98696800
ES.36720.1	chrX	+	181	1	Intergenic	novelGene_30080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19432438	19432619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_19432400_19432600
ES.36721.1	chrX	+	4164	1	Intergenic	novelGene_30081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	19530834	19534998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_19530800_19535000
ES.36722.1	chrX	-	172	1	Intergenic	novelGene_30082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATGAGAATA	NA	False	NA	NA	False	NA	NA	NA	19569477	19569305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_19569300_19569500
ES.36723.1	chrX	+	4723	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	-50	-2467	-50	2467	multi-exon	FALSE	canonical	3	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGGAAAATTTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	19925748	19966227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_19927448_19963203
ES.36724.1	chrX	+	158	1	Intergenic	novelGene_30083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	20071139	20071297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20071100_20071300
ES.36725.1	chrX	-	6182	17	NNC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	5	6902	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	2.17586189819115	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAACGAGTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	20158020	19965090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_19969013_19972159_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
ES.36725.2	chrX	-	9376	17	FSM	ENSMUSG00000037341.15	ENSMUST00000072451.11	2512	17	37	-6901	0	6900	multi-exon	FALSE	canonical	0	0	junction_11	2.05775970414429	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTAACGAGTTTTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	20158009	19965092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20005151_20005212_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
ES.36725.3	chrX	-	2998	16	NIC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	2	547	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.24697327284703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACGTTCTGTTCTGTT	NA	False	NA	NA	False	TATAAA	-31	NA	20158044	19971445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
ES.36725.4	chrX	-	681	2	NNC	ENSMUSG00000037341.15	novel	2512	17	NA	NA	2	-59302	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATTGTAGTATATG	NA	False	NA	NA	False	AATAAA	-17	NA	20158044	20090056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20090292_20157598
ES.36726.1	chrX	+	169	1	Intergenic	novelGene_30084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAGAACAACT	NA	False	NA	NA	False	NA	NA	NA	20189535	20189704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20189500_20189700
ES.36727.1	chrX	+	178	1	Intergenic	novelGene_30085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20190002	20190180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20190000_20190200
ES.36728.1	chrX	-	174	1	Intergenic	novelGene_30086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	20206776	20206602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20206600_20206800
ES.36729.1	chrX	-	202	1	Intergenic	novelGene_30087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCAAAAAGTGTTTCAC	NA	False	NA	NA	False	NA	NA	NA	20218077	20217875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20217900_20218100
ES.3673.1	chr10	-	214	1	Intergenic	novelGene_2809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAAATTCATTGACGCT	NA	False	NA	NA	False	AAAAAG	-31	NA	98724761	98724547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_98724500_98724800
ES.36730.1	chrX	+	4188	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	-5119	-1	intron_retention	FALSE	canonical	3	5	junction_1	174.833313473148	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	2	True	AATAAA	-17	NA	20225600	20267091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20225721_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.10	chrX	+	5522	12	Fusion	ENSMUSG00000060090.17_ENSMUSG00000037315.16	novel	1615	9	NA	NA	8	4	multi-exon	FALSE	canonical	0	0	junction_4	124.659072263196	705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGTGATGATTTTCT	NA	False	NA	13	True	ATTAAA	-21	NA	20230805	20386182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.11	chrX	+	3087	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	8	6115	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	174.178608043583	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTCTTAGGTTTATT	NA	False	NA	NA	False	AATAAA	-9	NA	20230805	20278007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20276049
ES.36730.12	chrX	+	4705	5	NIC	ENSMUSG00000060090.17	novel	4498	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	16	junction_1	170.095561376539	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTCTATACTTTGTT	NA	False	NA	7	True	AATAAA	-22	NA	20230805	20267096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20231438_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.13	chrX	+	4215	4	NIC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_2	194.946716366863	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	2	True	AATAAA	-17	NA	20230805	20267091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20231068_20243119_20243786_20263459_20263546_20263890
ES.36730.14	chrX	+	2453	2	ISM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	88	21780	-6	-21780	5prime_fragment	FALSE	canonical	3	410	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCAAATTTCTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	20230807	20245312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20231068_20243119
ES.36730.15	chrX	+	4367	6	NNC	ENSMUSG00000060090.17	novel	4498	6	NA	NA	-5	746	intron_retention	FALSE	non_canonical	0	0	junction_5	163.77911954825	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAAGGAAGGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	20230808	20267842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890_20267092_20267802
ES.36730.16	chrX	+	3094	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	89	1234	-5	-1234	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATTACTAATTTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	20230808	20265858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.17	chrX	+	4098	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	90	229	-4	-229	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGGCTTATAAAAGTAGA	NA	False	NA	NA	False	GATAAA	-7	NA	20230809	20266863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.18	chrX	+	3936	4	ISM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	90	736	-4	-736	intron_retention	FALSE	canonical	3	378	junction_2	19.6015872373189	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGGTTCAATGCTACT	NA	False	NA	2	True	TATAAA	-44	NA	20230809	20266356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459
ES.36730.19	chrX	+	3505	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	-1	-720	intron_retention	FALSE	canonical	0	0	junction_2	175.902494297267	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTTGAAGAGTACTC	NA	False	NA	18	True	NA	NA	NA	20230812	20266372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243217_20243660_20243786_20247943_20248059_20263459
ES.36730.2	chrX	+	4532	4	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	-5118	-1	intron_retention	FALSE	canonical	3	5	junction_1	187.894178255267	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	2	True	AATAAA	-17	NA	20225601	20267091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20225721_20243119_20243786_20247943_20248059_20263459
ES.36730.20	chrX	+	2991	4	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	-1	6112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	186.192254284531	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATTTCTTAGGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	20230812	20278004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20247943_20248059_20276049
ES.36730.21	chrX	+	4548	6	NNC	ENSMUSG00000060090.17	novel	4498	6	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_2	204.505843437296	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTGATGTCTATAC	NA	False	NA	1	True	AATAAA	-16	NA	20230822	20267090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20244575_20244812_20247943_20248059_20263459_20263546_20263890
ES.36730.22	chrX	+	4658	4	ISM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	103	1	9	-1	intron_retention	FALSE	canonical	3	378	junction_2	19.6015872373189	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	2	True	AATAAA	-17	NA	20230822	20267091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459
ES.36730.23	chrX	+	1626	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	116	2675	-22	-2675	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACATACATAGCC	NA	False	NA	NA	False	AATAAA	-13	NA	20230835	20264417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.24	chrX	+	3636	6	NNC	ENSMUSG00000060090.17	novel	4498	6	NA	NA	-11	-573	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	163.77911954825	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTTAAACTGCGTGT	NA	False	NA	NA	False	AATAAA	-34	NA	20230846	20266519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890_20264629_20264709
ES.36730.25	chrX	+	3572	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	-10	-704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	175.902494297267	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATATTTACTCATACT	NA	False	NA	34	True	NA	NA	NA	20230847	20266388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263903
ES.36730.27	chrX	+	4076	4	ISM	ENSMUSG00000060090.17	ENSMUST00000115387.8	4498	6	12320	-5	12260	1	3prime_fragment	FALSE	canonical	3	378	junction_1	20.5318181259127	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCTATACTTTGTTT	3707	False	NA	8	True	AATAAA	-23	NA	20243117	20267097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.28	chrX	+	3615	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	12517	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	176.987287679087	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTCTTGATGTCTATA	3964	False	NA	0	True	AATAAA	-15	NA	20243374	20267089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20243786_20247943_20248059_20263459_20263546_20263890_20264593_20264788
ES.36730.29	chrX	+	2988	5	NNC	ENSMUSG00000060090.17	novel	4417	5	NA	NA	12838	-620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.269321347647	435	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAATAAAGTGGTC	4285	False	NA	118	True	NA	NA	NA	20243695	20266472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20243786_20244456_20244572_20247943_20248059_20263459_20263546_20263890
ES.36730.3	chrX	+	3813	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	-114	718	-114	-718	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGAAGAGTACTCTA	NA	False	NA	20	True	NA	NA	NA	20230605	20266374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.30	chrX	+	3053	1	Intergenic	novelGene_30089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGGTTTATTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	20274959	20278012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20275000_20278000
ES.36730.31	chrX	+	197	1	Intergenic	novelGene_30090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGATAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	20280533	20280730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20280500_20280700
ES.36730.32	chrX	+	222	1	Intergenic	novelGene_30091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCGACAGATTATGCAC	NA	False	NA	NA	False	NA	NA	NA	20285294	20285516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20285300_20285500
ES.36730.33	chrX	+	4819	13	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-372	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	41.5759011394288	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20291554	20386178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20291651_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.34	chrX	+	4678	12	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-342	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.9689583054608	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20291584	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20291651_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.35	chrX	+	4627	13	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-341	-161	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	41.5759011394288	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCAAGCATCTGCTACA	NA	False	NA	NA	False	NA	NA	NA	20291585	20386017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20291651_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.36	chrX	+	4269	9	NNC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	-314	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	77.6353656525169	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20291612	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20291651_20295261_20295367_20301449_20301538_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.37	chrX	+	5092	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	-221	-5	-221	5	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTGATGATTTTCTA	NA	False	NA	14	True	ATTAAA	-22	NA	20291705	20386183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.38	chrX	+	4957	14	NNC	ENSMUSG00000037315.16	novel	4962	14	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.8433762685329	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTGTCAGTGTGATG	NA	False	NA	6	True	ATTAAA	-14	NA	20291958	20386175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20292070_20293104_20293231_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.39	chrX	+	4714	12	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	32	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	48.0988994908553	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTGTCAGTGTGATG	NA	False	NA	6	True	ATTAAA	-14	NA	20291987	20386175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20295261_20295371_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.4	chrX	+	4356	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	67	-6	-11	2	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTATACTTTGTTTT	NA	False	NA	9	True	AATAAA	-24	NA	20230786	20267098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.40	chrX	+	5005	13	NNC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	48.7056778574691	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20291998	20386178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20292281_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.41	chrX	+	4750	13	NNC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	49.6243527805541	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTGTCAGTGTGATG	NA	False	NA	6	True	ATTAAA	-14	NA	20292003	20386175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360572_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.42	chrX	+	7578	12	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	119	junction_1	20.5438454719865	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20292014	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.43	chrX	+	4657	12	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	50.4153000520561	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20292026	20386178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.44	chrX	+	4699	13	NNC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	48.7613234712376	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20292028	20386178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345817_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.45	chrX	+	4514	10	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	70.4619676768176	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTCTGTCAGTGTGAT	NA	False	NA	5	True	ATTAAA	-13	NA	20292028	20386174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20301449_20301538_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.46	chrX	+	1776	11	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	2	-4989	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	50.4464072060637	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTACAATTTAGTATCA	NA	False	NA	NA	False	AATATA	-20	NA	20292028	20379146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20295261_20295371_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974
ES.36730.49	chrX	+	4621	11	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	52.6019011063288	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20292032	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20292070_20295261_20295371_20301449_20301538_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.5	chrX	+	3835	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	78	504	0	-504	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATGAAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	20230797	20266588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.50	chrX	+	175	1	Intergenic	novelGene_30093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATACCCAATTA	NA	False	NA	NA	False	NA	NA	NA	20298496	20298671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20298500_20298700
ES.36730.51	chrX	+	188	1	Intergenic	novelGene_30094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTTAAATGTG	NA	False	NA	NA	False	NA	NA	NA	20302145	20302333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20302100_20302300
ES.36730.52	chrX	+	4389	8	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	18985	-2041	18985	-2	3prime_fragment	FALSE	canonical	3	148	junction_7	11.962526523119	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20345750	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.53	chrX	+	4039	6	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	33629	-2041	33629	-2	3prime_fragment	FALSE	canonical	3	148	junction_5	12.416118556135	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGTCAGTGTGATGA	NA	False	NA	7	True	ATTAAA	-15	NA	20360394	20386176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.54	chrX	+	4818	5	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	37909	-2043	37909	0	3prime_fragment	FALSE	canonical	3	148	junction_4	10.9772492000501	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	-3	True	NA	9	True	ATTAAA	-17	NA	20364674	20386178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ES.36730.55	chrX	+	3544	3	ISM	ENSMUSG00000037315.16	ENSMUST00000043693.7	2472	10	50488	-2039	50488	-4	3prime_fragment	FALSE	canonical	3	148	junction_2	8	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTCTGTCAGTGTGAT	NA	False	NA	5	True	ATTAAA	-13	NA	20377253	20386174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20377730_20378974_20379093_20383224
ES.36730.6	chrX	+	1535	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	79	2803	1	-2803	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACTTTCCAACTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	20230798	20264289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.7	chrX	+	4496	6	FSM	ENSMUSG00000060090.17	ENSMUST00000115387.8	4498	6	1	1	1	-1	multi-exon	TRUE	canonical	2	4	junction_1	195.012820091398	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTGATGTCTATACT	NA	False	NA	2	True	AATAAA	-17	NA	20230798	20267091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20231278_20231438_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.8	chrX	+	3760	6	FSM	ENSMUSG00000060090.17	ENSMUST00000115387.8	4498	6	7	731	7	-731	multi-exon	FALSE	canonical	2	4	junction_1	195.012820091398	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCAATGCTACTTTTTT	NA	False	NA	7	True	NA	NA	NA	20230804	20266361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20231278_20231438_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ES.36730.9	chrX	+	1306	6	FSM	ENSMUSG00000060090.17	ENSMUST00000115391.8	1398	6	86	6	8	-2	multi-exon	FALSE	canonical	0	0	junction_5	163.77911954825	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTGATGTCTATAC	NA	False	NA	1	True	AATAAA	-16	NA	20230805	20267090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890_20263986_20267008
ES.36731.1	chrX	-	5925	2	Antisense	novelGene_ENSMUSG00000082855.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCTTATCTTTAACTA	NA	False	NA	NA	False	NA	NA	NA	20258025	20252019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_20256531_20256611
ES.36731.2	chrX	-	606	1	Intergenic	novelGene_30088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGCATACAAA	NA	False	NA	NA	False	NA	NA	NA	20253841	20253235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20253200_20253800
ES.36732.1	chrX	-	497	1	Intergenic	novelGene_30092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATCA	NA	False	NA	NA	False	NA	NA	NA	20295231	20294734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20294700_20295200
ES.36733.1	chrX	-	133	1	Intergenic	novelGene_30095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	20312270	20312137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20312100_20312300
ES.36734.1	chrX	-	195	1	Intergenic	novelGene_30096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCCTTGATTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	20324018	20323823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20323800_20324000
ES.36735.1	chrX	-	5879	1	Antisense	novelGene_ENSMUSG00000037315.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATTCAGGA	NA	False	NA	NA	False	NA	NA	NA	20355551	20349672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_20349700_20355600
ES.36736.1	chrX	-	173	1	Intergenic	novelGene_30097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20420439	20420266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20420300_20420400
ES.36737.1	chrX	-	198	1	Intergenic	novelGene_30098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAGTAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	20431265	20431067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20431100_20431300
ES.36738.1	chrX	-	338	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-56	-108	-56	108	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATTAGATAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	20447609	20447271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20447300_20447600
ES.36739.1	chrX	+	2963	23	NNC	ENSMUSG00000031060.17	novel	2790	23	NA	NA	-454	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	102.84961540244	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	NA	False	NA	41	True	AATAAA	-29	NA	20483287	20517140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20483351_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.10	chrX	+	3439	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115375.8	3698	24	260	-1	-20	1	multi-exon	FALSE	canonical	3	6	junction_1	114.836729664995	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	535	False	NA	29	True	AATAAA	-17	NA	20484001	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20484322_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.13	chrX	+	3352	22	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-19	1	intron_retention	FALSE	canonical	0	0	junction_16	98.4550037077956	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	536	False	NA	29	True	AATAAA	-17	NA	20484002	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515535_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.15	chrX	+	3447	22	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	25	junction_5	119.37062845933	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	536	False	NA	25	True	AATAAA	-13	NA	20484002	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.16	chrX	+	3343	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	115.592318607176	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	536	False	NA	29	True	AATAAA	-17	NA	20484002	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516864
ES.36739.17	chrX	+	3110	23	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	103.572548135463	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCATTTCTACTTTC	536	False	NA	27	True	AATAAA	-15	NA	20484002	20517126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516864
ES.36739.18	chrX	+	3262	23	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	102.958197807983	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	537	False	NA	29	True	AATAAA	-17	NA	20484003	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510823_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.19	chrX	+	3240	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-17	-11	intron_retention	FALSE	canonical	3	194	junction_9	67.8117977146828	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGCATCTTCCAT	538	False	NA	17	True	AATAAA	-5	NA	20484004	20517116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.2	chrX	+	3854	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	-682	0	-402	0	multi-exon	FALSE	canonical	3	151	junction_9	72.7799809002085	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	NA	False	NA	41	True	AATAAA	-29	NA	20483339	20517140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.20	chrX	+	2869	15	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-16	-11	intron_retention	FALSE	canonical	0	0	junction_5	144.251693301702	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGCATCTTCCAT	539	False	NA	17	True	AATAAA	-5	NA	20484005	20517116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516716_20516797
ES.36739.22	chrX	+	3101	23	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_11	101.057016882337	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCCATTTCTACTTT	539	False	NA	26	True	AATAAA	-14	NA	20484005	20517125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513632_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.28	chrX	+	5175	22	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-14	0	intron_retention	FALSE	canonical	3	108	junction_4	92.3979365830604	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	541	False	NA	28	True	AATAAA	-16	NA	20484007	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516509_20516585_20516716_20516797
ES.36739.29	chrX	+	8506	20	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-14	1	intron_retention	FALSE	canonical	3	108	junction_4	101.189189529131	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCATGTCCTAGTATG	541	False	NA	42	True	AATAAA	-30	NA	20484007	20517141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.31	chrX	+	3889	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	194	junction_9	68.7497021226282	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	541	False	NA	25	True	AATAAA	-13	NA	20484007	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.32	chrX	+	5180	23	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-14	0	intron_retention	FALSE	canonical	3	151	junction_9	78.2031154924615	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	541	False	NA	28	True	AATAAA	-16	NA	20484007	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.33	chrX	+	3509	1	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-14	-27919	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGCCCAGAAAGGCAAACC	541	False	NA	NA	False	NA	NA	NA	20484007	20487516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484000_20487500
ES.36739.37	chrX	+	3323	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_12	114.141341093803	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	547	False	NA	25	True	AATAAA	-13	NA	20484013	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513632_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.38	chrX	+	3238	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	194	junction_9	64.8870639323405	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	547	False	NA	25	True	AATAAA	-13	NA	20484013	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516716_20516797
ES.36739.4	chrX	+	3979	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	-413	-2	-294	2	multi-exon	FALSE	canonical	3	108	junction_4	93.2983708932913	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCATGTCCTAGTATGG	NA	False	NA	43	True	AATAAA	-31	NA	20483447	20517142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.41	chrX	+	3562	23	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	108	junction_4	83.9764454381689	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATCTTCCATTTCTAC	549	False	NA	23	True	AATAAA	-11	NA	20484015	20517122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.42	chrX	+	6328	21	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-5	0	intron_retention	FALSE	canonical	3	194	junction_7	67.6386538896214	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	550	False	NA	28	True	AATAAA	-16	NA	20484016	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.43	chrX	+	3150	23	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	123.433791266599	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	550	False	NA	28	True	AATAAA	-16	NA	20484016	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516410_20516507_20516585_20516716_20516797
ES.36739.49	chrX	+	6553	22	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	2	0	intron_retention	FALSE	canonical	3	108	junction_4	96.5379156652853	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	559	False	NA	28	True	AATAAA	-16	NA	20484025	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.50	chrX	+	4998	22	NIC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	2	-3	intron_retention	FALSE	canonical	2	2	junction_8	102.436264128563	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	559	False	NA	25	True	AATAAA	-13	NA	20484025	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.51	chrX	+	6493	20	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	216	junction_3	53.8910874586812	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	559	False	NA	28	True	AATAAA	-16	NA	20484025	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20509070_20510910_20510972_20511103_20511281_20511675_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.52	chrX	+	3081	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	108.613838834628	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCATGTCCTAGTATG	559	False	NA	42	True	AATAAA	-30	NA	20484025	20517141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.53	chrX	+	2969	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	104.15928409213	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCCATTTCTACTTT	559	False	NA	26	True	AATAAA	-14	NA	20484025	20517125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.54	chrX	+	3344	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	15	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	116.980650493114	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGCATCTTCCAT	572	False	NA	17	True	AATAAA	-5	NA	20484038	20517116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514513_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.55	chrX	+	3389	21	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	21	-1	intron_retention	FALSE	canonical	3	216	junction_3	55.8476499057928	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCATTTCTACTTTC	578	False	NA	27	True	AATAAA	-15	NA	20484044	20517126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.57	chrX	+	2875	21	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	129.159929931848	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	581	False	NA	28	True	AATAAA	-16	NA	20484047	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.59	chrX	+	3620	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	107.153283136619	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	581	False	NA	28	True	AATAAA	-16	NA	20484047	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20504152_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.6	chrX	+	3004	23	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.691948874468	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	161	False	NA	28	True	AATAAA	-16	NA	20483627	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20483745_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.60	chrX	+	2533	20	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	102.747680618962	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	583	False	NA	28	True	AATAAA	-16	NA	20484049	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515919_20517039
ES.36739.62	chrX	+	3278	23	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	134.347374154275	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCCATTTCTACTTT	586	False	NA	26	True	AATAAA	-14	NA	20484052	20517125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515772_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.64	chrX	+	3822	20	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	31	-2	intron_retention	FALSE	canonical	3	216	junction_3	58.1120324050821	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCCATTTCTACTTT	588	False	NA	26	True	AATAAA	-14	NA	20484054	20517125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.65	chrX	+	3189	22	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	33	-3	intron_retention	FALSE	canonical	0	0	junction_7	102.039830380724	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	590	False	NA	25	True	AATAAA	-13	NA	20484056	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511109_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516716_20516797
ES.36739.66	chrX	+	1532	2	ISM	ENSMUSG00000031060.17	ENSMUST00000141128.2	2160	17	39	27919	39	-27919	5prime_fragment	FALSE	canonical	3	380	junction_1	0	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGCCCAGAAAGGCAAACC	596	False	NA	NA	False	NA	NA	NA	20484062	20487516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20484291_20486212
ES.36739.68	chrX	+	4600	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	47	6	intron_retention	FALSE	canonical	3	194	junction_8	66.4963129593529	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTACTTTCTCATGTC	604	False	NA	34	True	AATAAA	-22	NA	20484070	20517133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.69	chrX	+	3634	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	47	1	intron_retention	FALSE	canonical	1	2	junction_4	122.618485578933	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	604	False	NA	29	True	AATAAA	-17	NA	20484070	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20504030_20504152_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.7	chrX	+	3445	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	-82	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	100.321998591339	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCATTTCTACTTTCTC	193	False	NA	29	True	AATAAA	-17	NA	20483659	20517128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.70	chrX	+	3419	23	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	47	-1	intron_retention	FALSE	canonical	3	108	junction_4	88.4290465909914	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCATTTCTACTTTC	604	False	NA	27	True	AATAAA	-15	NA	20484070	20517126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585
ES.36739.72	chrX	+	6733	19	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	80	-1	intron_retention	FALSE	canonical	3	151	junction_6	76.3524155349698	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCATTTCTACTTTC	637	False	NA	27	True	AATAAA	-15	NA	20484103	20517126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20509070_20510910_20510972_20511103_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.73	chrX	+	3636	21	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	87	0	intron_retention	FALSE	canonical	3	216	junction_3	57.101204015327	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	644	False	NA	28	True	AATAAA	-16	NA	20484110	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.74	chrX	+	2877	23	NNC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	235	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.380389123572	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTTTCTCATGTCC	792	False	NA	35	True	AATAAA	-23	NA	20484258	20517134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20502021_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.75	chrX	+	7173	2	NNC	ENSMUSG00000031060.17	novel	2160	17	NA	NA	-310	-22023	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTAAGTTTAGTTGGTAA	2560	False	NA	NA	False	NA	NA	NA	20486026	20493412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20491400_20491612
ES.36739.76	chrX	+	3043	22	NIC	ENSMUSG00000031060.17	novel	2790	23	NA	NA	-126	-3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	117.161109689106	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	2744	False	NA	25	True	AATAAA	-13	NA	20486210	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.77	chrX	+	6882	19	NNC	ENSMUSG00000031060.17	novel	2793	23	NA	NA	-57	0	intron_retention	FALSE	canonical	0	0	junction_15	140.463968843294	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	2813	False	NA	28	True	AATAAA	-16	NA	20486279	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20486354_20501969_20502154_20503664_20505742_20508982_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515772_20515960_20516039_20516509_20516585_20516716_20516797
ES.36739.78	chrX	+	4223	1	Intergenic	novelGene_30099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTAAGTTTAGTTGGTAA	5723	False	NA	NA	False	NA	NA	NA	20489189	20493412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20489200_20493400
ES.36739.8	chrX	+	3734	24	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.840497210392	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	194	False	NA	28	True	AATAAA	-16	NA	20483660	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505728_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.82	chrX	+	8601	11	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	19334	0	intron_retention	FALSE	canonical	3	342	junction_1	36.3704550425204	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	NA	False	NA	28	True	AATAAA	-16	NA	20505670	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20505742_20507421_20510972_20511103_20511281_20511675_20513745_20513849_20513990_20514104_20514226_20514320_20515533_20515626_20515693_20515770_20515960_20516039_20516716_20516797
ES.36739.83	chrX	+	4013	16	NIC	ENSMUSG00000031060.17	novel	2562	22	NA	NA	22968	-4	intron_retention	FALSE	canonical	3	151	junction_3	69.3574957897286	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATCTTCCATTTCTACT	NA	False	NA	24	True	AATAAA	-12	NA	20509304	20517123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516716_20516797
ES.36739.84	chrX	+	2362	3	NNC	ENSMUSG00000031060.17	novel	2562	22	NA	NA	24536	-1994	intron_retention	TRUE	canonical	0	0	junction_1	75.5	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20510872	20513441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20511540_20511575_20511837_20512007
ES.36739.85	chrX	+	2560	15	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	24764	0	intron_retention	FALSE	canonical	3	194	junction_2	65.1228039310097	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	NA	False	NA	28	True	AATAAA	-16	NA	20511100	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516509_20516585_20516716_20516797
ES.36739.86	chrX	+	2114	16	NNC	ENSMUSG00000031060.17	novel	2562	22	NA	NA	24910	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	120.904075843437	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTCCATTTCTACTT	NA	False	NA	25	True	AATAAA	-13	NA	20511246	20517124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515783_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.36739.87	chrX	+	2515	11	NNC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	26741	0	intron_retention	FALSE	canonical	0	0	junction_6	131.039841269745	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCATTTCTACTTTCT	NA	False	NA	28	True	AATAAA	-16	NA	20513077	20517127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515630_20515693_20515770_20515960_20516039_20516509_20516585_20516716_20516797
ES.36739.9	chrX	+	3373	24	NNC	ENSMUSG00000031060.17	novel	3564	24	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	107.439330926191	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCATGTCCTAGTATGG	533	False	NA	43	True	AATAAA	-31	NA	20483999	20517142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503842_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ES.3674.1	chr10	-	170	1	Intergenic	novelGene_2810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAGAAGAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	98745483	98745313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_98745300_98745500
ES.36740.1	chrX	-	1421	3	FSM	ENSMUSG00000031059.10_ENSMUSG00000064398.3	ENSMUST00000116621.2	908	3	338	-851	338	48	multi-exon	FALSE	canonical	3	2198	junction_1	70	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTGACATCAATCTATG	NA	False	NA	NA	False	ATTAAA	-23	NA	20483520	20480713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20481782_20481952_20482084_20483298
ES.36740.2	chrX	-	965	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	-55	-2	-55	2	multi-exon	FALSE	canonical	3	2198	junction_1	70	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTACTGCTGCTTTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	20483913	20481562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20481782_20481952_20482084_20483298
ES.36740.3	chrX	-	545	3	NNC	ENSMUSG00000031059.10	novel	908	3	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1099	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGGTTACTGCTGCTT	NA	False	NA	-5	True	ATTAAA	-13	NA	20483806	20481565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20481782_20481952_20482084_20483608
ES.36740.4	chrX	-	725	4	NNC	ENSMUSG00000031059.10	novel	908	3	NA	NA	89	-6	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_3	964.303317887525	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGACTGGTTACTGC	NA	False	NA	-10	True	ATTAAA	-8	NA	20483769	20481570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20481782_20481952_20482084_20483298_20483521_20483608
ES.36741.1	chrX	-	172	1	Intergenic	novelGene_30100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAAATTCAATTCCCAA	NA	False	NA	NA	False	GGGGCT	-21	NA	20518612	20518440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20518400_20518600
ES.36742.1	chrX	-	209	1	Intergenic	novelGene_30101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGCACTTTTAAGTACA	NA	False	NA	NA	False	NA	NA	NA	20519458	20519249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20519200_20519500
ES.36743.1	chrX	+	3672	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	-65	437	-65	-437	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGAGTTCTCTGGT	NA	False	NA	84	True	NA	NA	NA	20524499	20548981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.10	chrX	+	3489	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-23	-477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	783.772075032021	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTAGCCATCCTGGCT	NA	False	NA	44	True	AATAAA	-13	NA	20524636	20548941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538759_20539064_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.100	chrX	+	1135	8	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	32	-474	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1287.94284636788	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529168	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535130_20547563_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.101	chrX	+	3014	22	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	32	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	688.941394385589	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529168	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547080_20548647
ES.36743.103	chrX	+	3567	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	711.162653687608	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546034_20547028_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.104	chrX	+	3552	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	712.22811626613	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536540_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.109	chrX	+	3639	27	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	897.060776637931	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529169	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20531516_20531592_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.112	chrX	+	4812	23	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-475	intron_retention	FALSE	canonical	3	2172	junction_1	369.610519263742	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529169	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20547111_20547346_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.114	chrX	+	3293	24	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-480	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	737.083467327265	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGTAGCCATCCTG	NA	False	NA	41	True	AATAAA	-10	NA	20529169	20548938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.115	chrX	+	3427	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	724.656925532505	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.117	chrX	+	3556	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	705.216612396503	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547567_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.118	chrX	+	3317	24	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	733.021736229219	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546028_20547630_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.12	chrX	+	3479	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-20	-474	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	782.949398109482	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524639	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544498_20544838_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.121	chrX	+	4034	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	712.312556115642	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGTTCGCATGTTTT	NA	False	NA	NA	False	NA	NA	NA	20529169	20549420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538759_20539064_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.122	chrX	+	3556	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	712.256713271276	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529169	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541984_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.123	chrX	+	3005	23	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	735.84212733686	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529169	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529254_20535468_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.125	chrX	+	3557	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	712.228992389386	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20529169	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541827_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.126	chrX	+	3103	22	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	724.226120712932	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529169	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546043_20548351_20548449_20548616
ES.36743.127	chrX	+	3222	24	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	33	-471	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	741.804533535307	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCATCCTGGCTGTCTCC	NA	False	NA	50	True	AATAAA	-19	NA	20529169	20548947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534770_20535448_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.129	chrX	+	3455	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	36	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	710.628796489419	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529172	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535418_20536462_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.130	chrX	+	4182	24	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	38	-476	intron_retention	FALSE	canonical	3	2172	junction_1	372.172389269534	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529174	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20539211_20541824_20541991_20542117_20542315_20544437_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.132	chrX	+	3575	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	40	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	923.95384646637	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529176	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535069_20535257_20535366_20535504_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.133	chrX	+	3368	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	40	-480	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	873.009815294192	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGTAGCCATCCTG	NA	False	NA	41	True	AATAAA	-10	NA	20529176	20548938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548225_20548624_20548738_20548792
ES.36743.135	chrX	+	3556	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	41	-468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	691.063065139499	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCTGGCTGTCTCCAAG	NA	False	NA	53	True	AATAAA	-22	NA	20529177	20548950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529359_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.136	chrX	+	3546	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	41	-478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	710.658349419748	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20529177	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545837_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.137	chrX	+	3543	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	42	-478	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	712.198889075236	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20529178	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538379_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.138	chrX	+	3605	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	44	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	711.617425306604	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529180	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544774_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.139	chrX	+	3720	25	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	44	475	44	-475	intron_retention	FALSE	canonical	3	2172	junction_1	320.692347269501	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529180	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347
ES.36743.14	chrX	+	3710	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-2	-474	intron_retention	FALSE	canonical	3	1167	junction_1	503.297665333901	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524657	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.142	chrX	+	3257	24	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	45	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	719.974267025971	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529181	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529258_20535098_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.143	chrX	+	3570	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	48	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	712.205763526244	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529184	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534828_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.144	chrX	+	3541	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	48	-477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	705.5650966424	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTAGCCATCCTGGCT	NA	False	NA	44	True	AATAAA	-13	NA	20529184	20548941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547762_20548154_20548244_20548347_20548449_20548616
ES.36743.148	chrX	+	2707	21	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	51	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	701.211266309947	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529187	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20548876
ES.36743.149	chrX	+	3526	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	56	-473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	710.204252310559	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20529192	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537610_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.15	chrX	+	3525	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-1	-475	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	688.056888345724	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524658	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524816_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.150	chrX	+	6444	24	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	67	-474	intron_retention	FALSE	canonical	3	2172	junction_1	372.297912094221	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529203	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.154	chrX	+	2888	21	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	7303	478	7303	-478	3prime_fragment	FALSE	canonical	3	2742	junction_3	326.725328066252	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20536439	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.156	chrX	+	2314	16	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	9071	475	-6108	-475	3prime_fragment	FALSE	canonical	3	2853	junction_2	315.853594776652	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20538207	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.157	chrX	+	2088	15	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-5812	-471	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	904.757967409979	2654	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCATCCTGGCTGTCTCC	NA	False	NA	50	True	AATAAA	-19	NA	20538503	20548947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547410_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.158	chrX	+	5859	9	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-3981	-474	intron_retention	FALSE	canonical	3	3123	junction_4	307.805919980432	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20540334	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.159	chrX	+	3313	8	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-2172	-476	intron_retention	FALSE	canonical	3	3123	junction_4	328.28969287655	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20542143	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20542315_20544437_20545024_20545629_20545705_20545831_20547111_20547346_20547440_20547561_20548244_20548347_20548449_20548616
ES.36743.16	chrX	+	3602	27	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-1	-445	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	890.53387102557	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAGTATGTCTAGAGT	NA	False	NA	76	True	AATAAA	-45	NA	20524658	20548973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20525438_20525536_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.18	chrX	+	3338	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-476	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	797.082752874854	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524659	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.19	chrX	+	3453	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	782.600638895727	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524659	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537086_20537588_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.2	chrX	+	3760	27	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	15	-450	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	892.786043035538	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAAGAAGTATGTCT	NA	False	NA	71	True	AATAAA	-40	NA	20524579	20548968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20533712_20533894_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.20	chrX	+	3448	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	691.063065139499	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524659	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524741_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.21	chrX	+	3381	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-475	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	791.770655451017	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524659	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.22	chrX	+	3480	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.888497421467	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524659	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535509_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.24	chrX	+	3456	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	782.600638895727	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524660	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537610_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.25	chrX	+	3316	25	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	797.950916366762	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524660	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535453_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.26	chrX	+	3342	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	781.919470022329	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524660	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545963_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.27	chrX	+	3460	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	783.772075032021	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20524660	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538745_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.28	chrX	+	5593	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-478	intron_retention	FALSE	canonical	3	1167	junction_1	503.826109152641	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20524660	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.3	chrX	+	3438	27	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	35	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	768.92687073894	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524599	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538246_20538341_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.32	chrX	+	3368	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-475	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	799.57462215161	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524660	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.33	chrX	+	3465	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-475	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	757.131950455137	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524660	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548624
ES.36743.34	chrX	+	3468	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	776.465637617016	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524660	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547567_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.36	chrX	+	3946	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	96	2	1	-2	multi-exon	FALSE	canonical	3	1167	junction_1	494.469940036804	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGCTAAGTTCGCATG	NA	False	NA	NA	False	NA	NA	NA	20524660	20549416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.37	chrX	+	7143	21	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-477	intron_retention	FALSE	canonical	3	1167	junction_1	542.020746835396	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTAGCCATCCTGGCT	NA	False	NA	44	True	AATAAA	-13	NA	20524660	20548941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20539211_20541824_20544503_20544827_20545024_20545629_20545705_20545831_20547111_20547346_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.39	chrX	+	5723	24	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-475	intron_retention	FALSE	canonical	3	1167	junction_1	514.64875609974	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524660	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.40	chrX	+	3425	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	781.888497421467	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524660	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535491_20536478_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.42	chrX	+	3504	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	1	-473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	691.063065139499	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20524660	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534658_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.43	chrX	+	4773	24	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	2	-474	intron_retention	FALSE	canonical	3	1167	junction_1	514.732756839977	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524661	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.44	chrX	+	3596	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	2	-478	intron_retention	FALSE	canonical	3	1167	junction_1	504.660362617496	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20524661	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.47	chrX	+	3475	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	2	-478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	782.453883625099	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20524661	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546028_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.48	chrX	+	3555	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	3	-447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	782.949398109482	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGAAGTATGTCTAGA	NA	False	NA	74	True	AATAAA	-43	NA	20524662	20548971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544507_20544775_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.49	chrX	+	3304	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	13	-476	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	798.465924966954	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524672	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.5	chrX	+	3775	26	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-34	-473	intron_retention	FALSE	canonical	3	3	junction_1	883.296637828991	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20524625	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20525438_20525536_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347
ES.36743.51	chrX	+	3780	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	21	-473	intron_retention	FALSE	canonical	3	1167	junction_1	504.28842710133	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20524680	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.54	chrX	+	3629	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	48	-474	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	683.112113785139	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524707	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524968_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.56	chrX	+	4158	26	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	86	-475	intron_retention	FALSE	canonical	3	49	junction_1	682.406393873914	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524745	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20525536_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.57	chrX	+	3487	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	86	-475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	691.063065139499	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20524745	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524865_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.59	chrX	+	3649	27	NNC	ENSMUSG00000001924.16	novel	830	6	NA	NA	123	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	890.914652006444	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20524782	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524968_20525438_20525536_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.6	chrX	+	3803	25	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-32	-478	intron_retention	FALSE	canonical	3	1167	junction_1	504.666246972525	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGTAGCCATCCTGGC	NA	False	NA	43	True	AATAAA	-12	NA	20524627	20548940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.60	chrX	+	3535	26	NIC	ENSMUSG00000001924.16	novel	830	6	NA	NA	-29	-477	combination_of_known_junctions	FALSE	canonical	2	33	junction_1	685.230292383517	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTAGCCATCCTGGCT	NA	False	NA	44	True	AATAAA	-13	NA	20525636	20548941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20525806_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.61	chrX	+	3427	26	NNC	ENSMUSG00000001924.16	novel	830	6	NA	NA	-13	-469	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	691.063065139499	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCTGGCTGTCTCCAA	NA	False	NA	52	True	AATAAA	-21	NA	20525652	20548949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20525706_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.62	chrX	+	2545	1	Genic_Genomic	ENSMUSG00000001924.16	novel	NA	NA	NA	NA	-403	-4178	mono-exon	FALSE	NA	NA	NA	NA	NA	2304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATACCTCTGTCCAATACC	NA	False	NA	NA	False	AATAAA	-9	NA	20528733	20531278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_20528700_20531300
ES.36743.64	chrX	+	3673	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	-28	-474	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	675.886646117528	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529108	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529413_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.65	chrX	+	3657	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	-27	441	-27	-441	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATGTCTAGAGTTCTC	NA	False	NA	80	True	NA	NA	NA	20529109	20548977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.67	chrX	+	3607	25	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	-1	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	725.053671385015	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529135	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536666_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.69	chrX	+	3553	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	1	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	685.859432828623	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529137	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548203_20548347_20548449_20548616
ES.36743.70	chrX	+	4070	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	1	0	1	0	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	False	NA	NA	False	NA	NA	NA	20529137	20549418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.71	chrX	+	3588	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	1	-473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	711.617425306604	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20529137	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544494_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.73	chrX	+	3438	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	2	-475	combination_of_known_splicesites	FALSE	canonical	3	6	junction_13	725.66129682403	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529138	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.75	chrX	+	3583	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	6	-474	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	684.933578093526	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529142	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548624
ES.36743.76	chrX	+	4589	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-475	intron_retention	FALSE	canonical	3	2172	junction_1	364.068665303066	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529143	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.77	chrX	+	3615	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	712.22811626613	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529143	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536576_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.78	chrX	+	3438	25	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-476	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	725.053671385015	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529143	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535459_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.79	chrX	+	3564	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-475	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	914.732835313131	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529143	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529361_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537672_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.8	chrX	+	3518	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	-24	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	757.59821963888	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20524635	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548468_20548616
ES.36743.80	chrX	+	3609	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-474	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	685.455998879578	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCCATCCTGGCTGTC	NA	False	NA	47	True	AATAAA	-16	NA	20529143	20548944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548468_20548616
ES.36743.81	chrX	+	3580	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	7	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	705.5650966424	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529143	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547746_20548141_20548244_20548347_20548449_20548616
ES.36743.83	chrX	+	3884	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	12	-475	intron_retention	FALSE	canonical	3	2172	junction_1	364.496834977114	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529148	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.85	chrX	+	3473	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	18	-475	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	725.809690343979	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529154	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.88	chrX	+	3578	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	24	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	710.628796489419	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529160	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535509_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.89	chrX	+	3595	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	24	-447	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	710.204252310559	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGAAGTATGTCTAGA	NA	False	NA	74	True	AATAAA	-43	NA	20529160	20548971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537106_20537592_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.91	chrX	+	3505	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	25	-476	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	724.744743139496	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529161	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.93	chrX	+	6809	23	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	25	-476	intron_retention	FALSE	canonical	3	2172	junction_1	380.504200083247	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529161	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20541991_20542117_20542315_20544437_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.94	chrX	+	3569	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	25	-476	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_20	710.31519764116	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTAGCCATCCTGGCTG	NA	False	NA	45	True	AATAAA	-14	NA	20529161	20548942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546028_20547028_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.96	chrX	+	3605	27	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	25	-475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	894.043299621239	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529161	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529365_20529607_20529642_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.98	chrX	+	2770	20	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	31	-473	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	789.478796474676	2657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCCATCCTGGCTGTCT	NA	False	NA	48	True	AATAAA	-17	NA	20529167	20548945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20529268_20537001_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36743.99	chrX	+	3801	25	NIC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	31	-475	intron_retention	FALSE	canonical	3	2172	junction_1	364.564656664478	2657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGCCATCCTGGCTGT	NA	False	NA	46	True	AATAAA	-15	NA	20529167	20548943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ES.36744.1	chrX	+	3228	16	NNC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	17	0	intron_retention	FALSE	canonical	3	5	junction_14	566.546638268495	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1877	False	NA	18	True	ATTAAA	-20	NA	20554209	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564583_20564768_20564847
ES.36744.10	chrX	+	3140	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-26	0	intron_retention	FALSE	canonical	1	14	junction_7	418.5151849097	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2298	False	NA	18	True	ATTAAA	-20	NA	20554630	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561943_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.100	chrX	+	3878	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	32	-915	intron_retention	FALSE	canonical	3	1538	junction_11	92.2480486478649	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2356	False	NA	12	True	NA	NA	NA	20554688	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20564768_20564847
ES.36744.101	chrX	+	3367	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	40	-3	intron_retention	FALSE	canonical	3	1538	junction_13	88.4547154559356	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2364	False	NA	15	True	ATTAAA	-17	NA	20554696	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.102	chrX	+	4019	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	46	-915	intron_retention	FALSE	canonical	3	1538	junction_10	96.2187091994067	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2370	False	NA	12	True	NA	NA	NA	20554702	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20564768_20564847
ES.36744.103	chrX	+	2148	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	47	-915	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	549.918595996009	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2371	False	NA	12	True	NA	NA	NA	20554703	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560145_20560351_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.105	chrX	+	4852	12	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	48	-3	intron_retention	FALSE	canonical	0	0	junction_8	484.877576778727	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2372	False	NA	15	True	ATTAAA	-17	NA	20554704	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562704_20562786_20562885_20562969_20563204_20563358_20564768_20564847
ES.36744.106	chrX	+	2448	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	49	-2	intron_retention	FALSE	canonical	2	14	junction_15	418.614996811576	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGGTTATAAATCATC	2373	False	NA	16	True	ATTAAA	-18	NA	20554705	20566117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20565468
ES.36744.107	chrX	+	3852	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	49	0	intron_retention	FALSE	canonical	3	1538	junction_10	95.0778628283156	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2373	False	NA	18	True	ATTAAA	-20	NA	20554705	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562885_20562969_20563450_20564689_20564768_20564847
ES.36744.108	chrX	+	3981	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	51	0	intron_retention	FALSE	canonical	3	35	junction_2	502.42254129368	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2375	False	NA	18	True	ATTAAA	-20	NA	20554707	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563450_20564689
ES.36744.109	chrX	+	2980	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	61	0	intron_retention	FALSE	canonical	0	0	junction_12	421.988762356956	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2385	False	NA	18	True	ATTAAA	-20	NA	20554717	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20562997_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.11	chrX	+	3275	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-24	0	intron_retention	FALSE	canonical	3	35	junction_2	413.425602604494	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2300	False	NA	18	True	ATTAAA	-20	NA	20554632	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.110	chrX	+	2292	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	73	-914	intron_retention	FALSE	canonical	3	1538	junction_13	88.3943557597289	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2397	False	NA	13	True	NA	NA	NA	20554729	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563450_20564689_20564768_20564847
ES.36744.112	chrX	+	3513	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	105	-3	intron_retention	FALSE	canonical	3	1580	junction_2	83.4790021601414	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2429	False	NA	15	True	ATTAAA	-17	NA	20554761	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562885_20562969_20563204_20563358_20563450_20564689
ES.36744.113	chrX	+	6102	14	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	1919	-3	intron_retention	FALSE	canonical	3	35	junction_1	443.361140146175	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	4243	False	NA	15	True	ATTAAA	-17	NA	20556575	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.115	chrX	+	2629	8	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	347	-5	intron_retention	FALSE	canonical	3	1538	junction_7	66.9239592861227	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	3305	False	NA	13	True	ATTAAA	-15	NA	20560868	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.116	chrX	+	2483	8	NNC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	-137	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	753.47136776444	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	4399	False	NA	15	True	ATTAAA	-17	NA	20561962	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20562512_20562563_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564583_20564768_20564847
ES.36744.117	chrX	+	3234	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	-15	248	-15	-246	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGGCTTTGTTTCTTC	NA	False	NA	9	True	CATAAA	-24	NA	20570129	20586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.118	chrX	+	3485	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	-15	-3	-15	3	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTTTTGAGTGTTTAT	NA	False	NA	6	True	NA	NA	NA	20570129	20586781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.119	chrX	+	3147	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	64.8997565100342	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570132	20586779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.12	chrX	+	3211	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	4	junction_1	549.380389620889	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2301	False	NA	18	True	ATTAAA	-20	NA	20554633	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559036_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.120	chrX	+	5062	17	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	1	1	intron_retention	FALSE	canonical	3	191	junction_8	32.1867111553821	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570145	20586779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.121	chrX	+	4268	20	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	1	1	intron_retention	FALSE	canonical	3	191	junction_9	32.7398035553377	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570145	20586779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.122	chrX	+	4670	20	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	3	0	intron_retention	FALSE	canonical	3	30	junction_2	73.1677009709473	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570147	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.124	chrX	+	4518	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	-249	intron_retention	FALSE	canonical	3	208	junction_7	30.2325473689404	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570166	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.125	chrX	+	5195	17	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	-248	intron_retention	FALSE	canonical	3	30	junction_2	78.5524307389657	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGTGGCTTTGTTTCT	NA	False	NA	7	True	CATAAA	-22	NA	20570166	20586528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.126	chrX	+	2988	20	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	-250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.3443385684955	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTGGCTTTGTTT	NA	False	NA	5	True	CATAAA	-20	NA	20570166	20586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570290_20578294_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.127	chrX	+	3516	22	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.5175554282958	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570166	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.128	chrX	+	4435	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	191	junction_9	32.2838969147159	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570166	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.129	chrX	+	7315	19	NNC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_2	92.1811320776172	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570170	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20573150_20573222_20575672_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585658_20585831_20585921_20586004
ES.36744.13	chrX	+	5161	10	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-20	0	intron_retention	FALSE	canonical	3	1580	junction_2	90.0888450364417	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2304	False	NA	18	True	ATTAAA	-20	NA	20554636	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969
ES.36744.130	chrX	+	5461	15	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	221	junction_12	30.4225346124365	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570171	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.131	chrX	+	4900	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	0	1	intron_retention	FALSE	canonical	3	30	junction_2	74.2864201736914	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570172	20586779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.132	chrX	+	4323	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	0	-249	intron_retention	FALSE	canonical	3	205	junction_12	31.0921072911192	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570172	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.133	chrX	+	4570	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	205	junction_12	31.0921072911192	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570174	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.134	chrX	+	3586	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.7331451467245	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570174	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579835_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.135	chrX	+	4557	17	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	-246	intron_retention	FALSE	canonical	0	0	junction_3	68.0348026748076	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGGCTTTGTTTCTTC	NA	False	NA	9	True	CATAAA	-24	NA	20570174	20586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.136	chrX	+	3418	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.1479881219735	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570174	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579835_20580161_20580252_20580412_20580915_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.137	chrX	+	4431	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	-248	intron_retention	FALSE	canonical	3	191	junction_9	32.5378672129592	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGTGGCTTTGTTTCT	NA	False	NA	7	True	CATAAA	-22	NA	20570174	20586528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.138	chrX	+	3989	20	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	-247	intron_retention	FALSE	canonical	3	191	junction_9	32.7398035553377	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGGCTTTGTTTCTT	NA	False	NA	8	True	CATAAA	-23	NA	20570174	20586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.139	chrX	+	3255	22	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	-251	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.5175554282958	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACAGTGTGGCTTTGTT	NA	False	NA	4	True	CATAAA	-19	NA	20570174	20586525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.14	chrX	+	3599	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-18	0	intron_retention	FALSE	canonical	3	1538	junction_13	90.6073523931271	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2306	False	NA	18	True	ATTAAA	-20	NA	20554638	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.140	chrX	+	5083	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	2	-1	intron_retention	FALSE	canonical	3	30	junction_2	76.31042049954	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTAGCTGTTTTGAGT	NA	False	NA	0	True	NA	NA	NA	20570174	20586775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.141	chrX	+	4723	18	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	5	-249	intron_retention	FALSE	canonical	0	0	junction_7	65.513568683601	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570177	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579835_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.142	chrX	+	3275	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	62.1242907404181	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570177	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584391_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.143	chrX	+	4470	19	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	5	-248	intron_retention	FALSE	canonical	0	0	junction_7	64.3179073810439	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTGTGGCTTTGTTTCT	NA	False	NA	7	True	CATAAA	-22	NA	20570177	20586528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579835_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.144	chrX	+	4236	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	5	-251	intron_retention	FALSE	canonical	3	191	junction_9	32.8956918639793	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACAGTGTGGCTTTGTT	NA	False	NA	4	True	CATAAA	-19	NA	20570177	20586525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.145	chrX	+	5244	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	6	0	intron_retention	FALSE	canonical	3	30	junction_2	76.35040329327	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570178	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.146	chrX	+	5110	16	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	7	-249	intron_retention	FALSE	canonical	3	221	junction_13	29.7159889621732	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570179	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.147	chrX	+	4982	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	12	0	intron_retention	FALSE	canonical	3	30	junction_2	75.0534788757858	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570184	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.149	chrX	+	3432	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.1479881219735	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570184	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579835_20580161_20580252_20580412_20580891_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.15	chrX	+	3761	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	1580	junction_2	87.5570180223075	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2306	False	NA	15	True	ATTAAA	-17	NA	20554638	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689
ES.36744.150	chrX	+	4164	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-12	-249	intron_retention	FALSE	canonical	3	191	junction_9	32.2838969147159	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570186	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.152	chrX	+	2005	12	ISM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	42	4988	-12	-2134	5prime_fragment	FALSE	canonical	3	191	junction_9	22.2026727599618	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTATATATAATATTTA	NA	False	NA	NA	False	NA	NA	NA	20570186	20581790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266
ES.36744.153	chrX	+	4297	21	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-12	0	intron_retention	FALSE	canonical	3	30	junction_2	71.7097448050124	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570186	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.154	chrX	+	4667	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-10	0	intron_retention	FALSE	canonical	3	191	junction_9	32.5378672129592	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570188	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.155	chrX	+	4569	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-9	-246	intron_retention	FALSE	canonical	3	30	junction_2	75.0089912305991	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGGCTTTGTTTCTTC	NA	False	NA	9	True	CATAAA	-24	NA	20570189	20586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.156	chrX	+	4445	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-9	0	intron_retention	FALSE	canonical	1	2	junction_1	65.8907557666607	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20570189	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.157	chrX	+	3216	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-8	-250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.9025237967444	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTGGCTTTGTTT	NA	False	NA	5	True	CATAAA	-20	NA	20570190	20586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570406_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.158	chrX	+	4905	18	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-6	0	intron_retention	FALSE	canonical	3	205	junction_11	30.4814879437739	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570192	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.159	chrX	+	3167	21	NNC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-4	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.6945771179613	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20570194	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570359_20577987_20578098_20578268_20578408_20578571_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.16	chrX	+	3129	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-18	0	intron_retention	FALSE	canonical	3	47	junction_12	410.497551758838	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2306	False	NA	18	True	ATTAAA	-20	NA	20554638	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563169_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.160	chrX	+	4721	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-3	-250	intron_retention	FALSE	canonical	3	30	junction_2	75.0534788757858	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTGGCTTTGTTT	NA	False	NA	5	True	CATAAA	-20	NA	20570195	20586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.161	chrX	+	4545	20	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	-3	3	intron_retention	FALSE	canonical	3	30	junction_2	72.6536579713678	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTTTTGAGTGTTTAT	NA	False	NA	6	True	NA	NA	NA	20570195	20586781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.162	chrX	+	3814	21	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	5	1	intron_retention	FALSE	canonical	3	30	junction_2	71.9133332560798	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTTTGAGTGTTT	NA	False	NA	4	True	NA	NA	NA	20570203	20586779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.163	chrX	+	3356	21	NNC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	565	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	62.537568708737	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570763	20586778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20570867_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.164	chrX	+	4901	17	NIC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	2968	0	intron_retention	FALSE	canonical	3	30	junction_1	61.5872095081438	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20573166	20586776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.165	chrX	+	6123	20	ISM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	4722	251	-3197	-249	3prime_fragment	FALSE	canonical	3	183	junction_12	35.1859327216978	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTGGCTTTGTTTC	NA	False	NA	6	True	CATAAA	-21	NA	20574866	20586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.166	chrX	+	7620	17	NIC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	-2960	-1	intron_retention	FALSE	canonical	3	205	junction_10	30.6257015225774	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTAGCTGTTTTGAGT	NA	False	NA	0	True	NA	NA	NA	20575103	20586775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.167	chrX	+	5733	19	FSM	ENSMUSG00000031066.11	ENSMUST00000149960.2	3976	19	-1756	-1	-1756	1	multi-exon	FALSE	canonical	3	191	junction_8	33.2123731220017	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGCTGTTTTGAGTGT	NA	False	NA	2	True	NA	NA	NA	20576307	20586777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.168	chrX	+	4375	13	NIC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	1023	-246	intron_retention	FALSE	canonical	3	205	junction_7	34.0269501033127	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGGCTTTGTTTCTTC	NA	False	NA	9	True	CATAAA	-24	NA	20579086	20586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20579222_20579353_20579416_20579535_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.169	chrX	+	4022	11	NIC	ENSMUSG00000031066.11	novel	3976	19	NA	NA	1563	-246	intron_retention	FALSE	canonical	3	221	junction_8	32.2031054403143	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGGCTTTGTTTCTTC	NA	False	NA	9	True	CATAAA	-24	NA	20579626	20586530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.18	chrX	+	3474	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-16	-3	intron_retention	FALSE	canonical	3	1538	junction_13	88.1096680817006	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2308	False	NA	15	True	ATTAAA	-17	NA	20554640	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.2	chrX	+	3121	16	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	18	0	intron_retention	FALSE	canonical	3	24	junction_1	416.044580944559	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1878	False	NA	18	True	ATTAAA	-20	NA	20554210	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.20	chrX	+	2817	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-11	-3	intron_retention	FALSE	canonical	1	4	junction_1	420.933702882321	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2313	False	NA	15	True	ATTAAA	-17	NA	20554645	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20554735_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.22	chrX	+	2389	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-8	-914	intron_retention	FALSE	canonical	3	1538	junction_14	87.5299365698294	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2316	False	NA	13	True	NA	NA	NA	20554648	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.23	chrX	+	2263	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-8	-915	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	413.425602604494	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2316	False	NA	12	True	NA	NA	NA	20554648	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.24	chrX	+	3137	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-8	0	intron_retention	FALSE	canonical	2	6	junction_12	420.521084158954	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2316	False	NA	18	True	ATTAAA	-20	NA	20554648	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563085_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.25	chrX	+	3006	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_16	408.655703955053	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2316	False	NA	18	True	ATTAAA	-20	NA	20554648	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847_20565921_20566042
ES.36744.26	chrX	+	3211	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1538	junction_14	85.3986151491214	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2318	False	NA	18	True	ATTAAA	-20	NA	20554650	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.27	chrX	+	3672	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1538	junction_12	91.5752195374564	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2318	False	NA	18	True	ATTAAA	-20	NA	20554650	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.28	chrX	+	3901	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	1580	junction_2	91.1205794538204	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2319	False	NA	13	True	ATTAAA	-15	NA	20554651	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563450_20564689
ES.36744.3	chrX	+	3792	13	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	21	-3	intron_retention	FALSE	canonical	3	24	junction_1	619.187751996292	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	1881	False	NA	15	True	ATTAAA	-17	NA	20554213	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20554601_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.30	chrX	+	3595	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	35	junction_2	443.458636323815	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2321	False	NA	18	True	ATTAAA	-20	NA	20554653	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.31	chrX	+	3691	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-2	28	intron_retention	FALSE	canonical	3	1579	junction_10	87.6302205609204	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCTCAAGTTATGGTGA	2322	False	NA	46	True	TATAAA	-16	NA	20554654	20566147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689
ES.36744.32	chrX	+	8183	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_11	93.2010179776279	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.33	chrX	+	3456	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1579	junction_11	84.278981635768	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689
ES.36744.34	chrX	+	2022	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	-914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	408.655703955053	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2325	False	NA	13	True	NA	NA	NA	20554657	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20554883_20554984_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.35	chrX	+	5169	16	Fusion	ENSMUSG00000031066.11_ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	-6037	intron_retention	FALSE	canonical	1	2	junction_15	421.554846833587	1591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGGTTGAGTATTAAA	2325	False	NA	NA	False	NA	NA	NA	20554657	20573355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20570033
ES.36744.36	chrX	+	3075	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	-5	intron_retention	FALSE	canonical	1	9	junction_8	448.71768644681	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2325	False	NA	13	True	ATTAAA	-15	NA	20554657	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.37	chrX	+	3196	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	0	intron_retention	FALSE	canonical	2	5	junction_1	549.215601875757	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2325	False	NA	18	True	ATTAAA	-20	NA	20554657	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559027_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.38	chrX	+	3059	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	44	junction_3	404.161760794968	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2325	False	NA	18	True	ATTAAA	-20	NA	20554657	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560351_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.39	chrX	+	3331	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	2	-3	intron_retention	FALSE	canonical	3	35	junction_2	427.864703009763	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2326	False	NA	15	True	ATTAAA	-17	NA	20554658	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.4	chrX	+	2122	16	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	22	-914	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	416.044580944559	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	1882	False	NA	13	True	NA	NA	NA	20554214	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.40	chrX	+	2118	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	3	-909	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_12	410.497551758838	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGATGTGTCTGTCTCTG	2327	False	NA	18	True	NA	NA	NA	20554659	20565129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563169_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.41	chrX	+	3823	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	3	-5	intron_retention	FALSE	canonical	3	1580	junction_2	82.8156989948162	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2327	False	NA	13	True	ATTAAA	-15	NA	20554659	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20563204_20563358_20563450_20564689
ES.36744.42	chrX	+	3372	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	4	0	intron_retention	FALSE	canonical	3	1538	junction_14	87.5299365698294	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2328	False	NA	18	True	ATTAAA	-20	NA	20554660	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.44	chrX	+	3678	14	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	6	-3	intron_retention	FALSE	canonical	3	5	junction_12	449.75494971473	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2330	False	NA	15	True	ATTAAA	-17	NA	20554662	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564583_20564768_20564847
ES.36744.45	chrX	+	3004	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	8	0	intron_retention	FALSE	non_canonical	0	0	junction_1	408.655703955053	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2332	False	NA	18	True	ATTAAA	-20	NA	20554664	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20554878_20554985_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.46	chrX	+	3189	15	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	8	3	8	-3	intron_retention	FALSE	canonical	3	1579	junction_12	81.824725568044	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2332	False	NA	15	True	ATTAAA	-17	NA	20554664	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689
ES.36744.48	chrX	+	4158	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	1538	junction_11	90.8418842488656	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2333	False	NA	18	True	ATTAAA	-20	NA	20554665	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.5	chrX	+	2326	15	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	-22	-914	intron_retention	FALSE	canonical	3	24	junction_1	429.170462304066	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	1883	False	NA	13	True	NA	NA	NA	20554215	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.50	chrX	+	3640	15	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	4	junction_1	581.685043469332	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2333	False	NA	18	True	ATTAAA	-20	NA	20554665	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559036_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.52	chrX	+	2456	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	10	-914	intron_retention	FALSE	canonical	3	1538	junction_13	88.1096680817006	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2334	False	NA	13	True	NA	NA	NA	20554666	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.53	chrX	+	4228	9	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	10	-907	intron_retention	FALSE	canonical	3	1580	junction_2	86.9503270551641	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTCTGTCTCTGTC	2334	False	NA	20	True	NA	NA	NA	20554666	20565131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786
ES.36744.54	chrX	+	2862	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_8	446.769853252374	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2334	False	NA	15	True	ATTAAA	-17	NA	20554666	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.56	chrX	+	3324	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	11	0	intron_retention	FALSE	canonical	1	7	junction_8	463.074050653768	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2335	False	NA	18	True	ATTAAA	-20	NA	20554667	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689
ES.36744.57	chrX	+	3160	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	12	-5	intron_retention	FALSE	canonical	0	0	junction_9	420.683391109699	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2336	False	NA	13	True	ATTAAA	-15	NA	20554668	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562528_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.58	chrX	+	2656	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	15	-914	intron_retention	FALSE	canonical	3	1538	junction_12	91.5752195374564	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2339	False	NA	13	True	NA	NA	NA	20554671	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.59	chrX	+	3684	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	17	0	intron_retention	FALSE	canonical	3	1538	junction_11	86.6439470114272	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2341	False	NA	18	True	ATTAAA	-20	NA	20554673	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20563450_20564689_20564768_20564847
ES.36744.6	chrX	+	3236	16	FSM	ENSMUSG00000031065.15	ENSMUST00000115364.8	3270	16	34	0	-11	0	multi-exon	FALSE	canonical	3	24	junction_1	561.492914766815	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1894	False	NA	18	True	ATTAAA	-20	NA	20554226	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20554601_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.60	chrX	+	3569	14	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	18	-3	intron_retention	FALSE	canonical	2	6	junction_10	449.501604343847	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2342	False	NA	15	True	ATTAAA	-17	NA	20554674	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563085_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.61	chrX	+	3136	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_14	421.983854351483	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2342	False	NA	18	True	ATTAAA	-20	NA	20554674	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564655_20564768_20564847
ES.36744.62	chrX	+	5158	36	Fusion	ENSMUSG00000031066.11_ENSMUSG00000031065.15	novel	3976	19	NA	NA	18	4	multi-exon	FALSE	canonical	1	2	junction_15	710.458722752204	1668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGAGTGTTTATT	2342	False	NA	7	True	NA	NA	NA	20554674	20586782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.63	chrX	+	2172	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	21	-914	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	549.380389620889	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2345	False	NA	13	True	NA	NA	NA	20554677	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559036_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.64	chrX	+	2574	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	22	-904	intron_retention	FALSE	canonical	3	1538	junction_13	90.6073523931271	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGTCTCTGTCTTG	2346	False	NA	23	True	NA	NA	NA	20554678	20565134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.65	chrX	+	4989	10	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	22	0	intron_retention	FALSE	canonical	3	44	junction_3	506.897924806207	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2346	False	NA	18	True	ATTAAA	-20	NA	20554678	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560351_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20563204_20563358
ES.36744.66	chrX	+	5890	32	Fusion	ENSMUSG00000031066.11_ENSMUSG00000031065.15	novel	3976	19	NA	NA	22	1	intron_retention	FALSE	canonical	0	0	junction_13	701.768171176923	1668	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGCTGTTTTGAGTGT	2346	False	NA	2	True	NA	NA	NA	20554678	20586777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ES.36744.67	chrX	+	2508	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-914	intron_retention	FALSE	canonical	1	1	junction_2	474.100923802531	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2348	False	NA	13	True	NA	NA	NA	20554680	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.68	chrX	+	3301	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	0	intron_retention	FALSE	canonical	3	1538	junction_14	87.6087079820591	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2348	False	NA	18	True	ATTAAA	-20	NA	20554680	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.7	chrX	+	3181	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	-33	-28	-33	28	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCTCAAGTTATGGTGA	2291	False	NA	46	True	TATAAA	-16	NA	20554623	20566147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.70	chrX	+	2597	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-914	intron_retention	FALSE	canonical	3	1538	junction_12	91.4087280053473	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2348	False	NA	13	True	NA	NA	NA	20554680	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563450_20564689_20564768_20564847
ES.36744.71	chrX	+	3123	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-3	intron_retention	FALSE	canonical	1	1	junction_9	420.439050940271	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2348	False	NA	15	True	ATTAAA	-17	NA	20554680	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562555_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.73	chrX	+	2324	10	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	526.067896852455	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2348	False	NA	13	True	ATTAAA	-15	NA	20554680	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562371_20565067
ES.36744.74	chrX	+	2646	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	24	-915	intron_retention	FALSE	canonical	3	1538	junction_12	84.8493354259314	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2348	False	NA	12	True	NA	NA	NA	20554680	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.75	chrX	+	3798	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-3	intron_retention	FALSE	canonical	3	1580	junction_2	87.4350616171796	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2349	False	NA	15	True	ATTAAA	-17	NA	20554681	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562885_20562969_20563204_20563358_20563450_20564689
ES.36744.76	chrX	+	3479	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-3	intron_retention	FALSE	canonical	3	35	junction_2	427.429293591827	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2349	False	NA	15	True	ATTAAA	-17	NA	20554681	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.77	chrX	+	2177	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-914	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	549.215601875757	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2349	False	NA	13	True	NA	NA	NA	20554681	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559027_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.78	chrX	+	3687	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	35	junction_2	441.918343684902	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2349	False	NA	18	True	ATTAAA	-20	NA	20554681	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.79	chrX	+	3198	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-3	intron_retention	FALSE	canonical	3	5	junction_14	420.760813553523	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2349	False	NA	15	True	ATTAAA	-17	NA	20554681	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564583_20564768_20564847
ES.36744.8	chrX	+	2161	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	-26	985	-26	-904	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTGTCTCTGTCTTG	2298	False	NA	23	True	NA	NA	NA	20554630	20565134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.80	chrX	+	2188	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-911	intron_retention	FALSE	canonical	3	1538	junction_14	85.3986151491214	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGATGTGTCTGTCTC	2349	False	NA	16	True	NA	NA	NA	20554681	20565127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.83	chrX	+	2718	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	479	intron_retention	FALSE	canonical	3	1580	junction_2	85.494093363226	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCCCACCCCAAGACAG	2349	False	NA	NA	False	NA	NA	NA	20554681	20563926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969
ES.36744.84	chrX	+	3942	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	1538	junction_12	88.3680356363217	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2349	False	NA	18	True	ATTAAA	-20	NA	20554681	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.85	chrX	+	3443	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	1538	junction_13	88.7456307783573	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2349	False	NA	18	True	ATTAAA	-20	NA	20554681	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.86	chrX	+	3474	14	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	-3	intron_retention	FALSE	canonical	0	0	junction_10	451.069603256802	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2349	False	NA	15	True	ATTAAA	-17	NA	20554681	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20562997_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.87	chrX	+	3735	12	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	1538	junction_11	92.9015296691935	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2349	False	NA	18	True	ATTAAA	-20	NA	20554681	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.88	chrX	+	3718	14	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	25	0	intron_retention	FALSE	canonical	2	5	junction_1	601.818477026039	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2349	False	NA	18	True	ATTAAA	-20	NA	20554681	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559027_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.9	chrX	+	2091	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	-26	-914	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	404.161760794968	1354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTTGATGTGTCTGT	2298	False	NA	13	True	NA	NA	NA	20554630	20565124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560351_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.90	chrX	+	3094	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	26	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	417.151557856641	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTCTGGTTATAAATC	2350	False	NA	13	True	ATTAAA	-15	NA	20554682	20566114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562898_20562977_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.91	chrX	+	3101	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	26	0	intron_retention	FALSE	canonical	1	9	junction_8	579.505436575368	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2350	False	NA	18	True	ATTAAA	-20	NA	20554682	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.92	chrX	+	3635	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	26	0	intron_retention	FALSE	canonical	3	1538	junction_12	89.1884708543281	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2350	False	NA	18	True	ATTAAA	-20	NA	20554682	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.93	chrX	+	2203	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	27	-915	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_14	420.760813553523	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCTTGATGTGTCTG	2351	False	NA	12	True	NA	NA	NA	20554683	20565123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564583_20564768_20564847
ES.36744.95	chrX	+	2966	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	27	-3	intron_retention	FALSE	canonical	1	9	junction_8	432.555818033102	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTGGTTATAAATCAT	2351	False	NA	15	True	ATTAAA	-17	NA	20554683	20566116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.96	chrX	+	3875	11	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	27	-4	intron_retention	FALSE	canonical	3	1538	junction_10	90.4657393713222	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTGGTTATAAATCA	2351	False	NA	14	True	ATTAAA	-16	NA	20554683	20566115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20563450_20564689_20564768_20564847
ES.36744.97	chrX	+	3578	13	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	28	0	intron_retention	FALSE	canonical	3	44	junction_3	448.371373850839	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2352	False	NA	18	True	ATTAAA	-20	NA	20554684	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559562_20559771_20560276_20560351_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
ES.36744.99	chrX	+	3750	15	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	30	0	intron_retention	FALSE	canonical	3	4	junction_1	679.935444864932	1360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2354	False	NA	18	True	ATTAAA	-20	NA	20554686	20566119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20555046_20559036_20559105_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ES.36745.1	chrX	+	176	1	Intergenic	novelGene_30102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAAAGTACATG	NA	False	NA	NA	False	NA	NA	NA	20595824	20596000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20595800_20596000
ES.36746.1	chrX	+	157	1	Intergenic	novelGene_30103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGGGGGGGGGAGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	20638407	20638564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20638400_20638600
ES.36747.1	chrX	+	2754	1	Genic_Genomic	ENSMUSG00000118509.2	novel	NA	NA	NA	NA	1923	409	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTGTCTCTTCATC	5077	False	NA	NA	False	NA	NA	NA	20646977	20649731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_20647000_20649700
ES.36748.1	chrX	+	156	1	Intergenic	novelGene_30104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTTCACTGATC	NA	False	NA	NA	False	NA	NA	NA	20654386	20654542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20654400_20654500
ES.36749.1	chrX	+	2393	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-30	14	combination_of_known_junctions	TRUE	non_canonical	1	66	junction_12	96.2243674382372	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCCCGACTCTTC	1093	False	NA	37	True	NA	NA	NA	20664022	20726772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.10	chrX	+	7419	11	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	3	14	intron_retention	FALSE	non_canonical	1	66	junction_7	111.343118332477	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCCCGACTCTTC	1126	False	NA	37	True	NA	NA	NA	20664055	20726772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20718052_20718168_20719699_20719798_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.11	chrX	+	2317	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	7	-1	combination_of_known_junctions	FALSE	non_canonical	1	12	junction_13	109.678844308686	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCTTGTTTATTTT	1130	False	NA	22	True	NA	NA	NA	20664059	20726757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
ES.36749.12	chrX	+	2520	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	-161	-1	-161	1	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	6112	False	NA	24	True	NA	NA	NA	20714620	20726759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.13	chrX	+	933	7	NNC	ENSMUSG00000001127.13	novel	826	8	NA	NA	-8	-42	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	124.993333155546	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATGTCATTATGA	6286	False	NA	NA	False	AATAAA	-12	NA	20714794	20719086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
ES.36749.14	chrX	+	7380	12	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	-3	0	intron_retention	FALSE	non_canonical	1	16	junction_7	117.966306998129	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6291	False	NA	23	True	NA	NA	NA	20714799	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20723762_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
ES.36749.15	chrX	+	1566	10	NNC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_6	119.22755502208	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCGTTGTGTAGTTATT	6291	False	NA	NA	False	NA	NA	NA	20714799	20720798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719623_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.16	chrX	+	1654	5	ISM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-16	-1	-2	1	intron_retention	FALSE	canonical	3	219	junction_1	70.1654295219519	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCTCCAACTATCTT	6292	False	NA	NA	False	AATAAA	-13	NA	20714800	20719129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896
ES.36749.17	chrX	+	1547	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-15	-12	-1	-3	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATCTTTGTCCTTCATT	6293	False	NA	NA	False	AATAAA	-24	NA	20714801	20719140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ES.36749.18	chrX	+	3917	4	NIC	ENSMUSG00000001127.13	novel	2854	5	NA	NA	-1	-42	intron_retention	FALSE	canonical	3	322	junction_2	37.5588427226754	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATGTCATTATGA	6293	False	NA	NA	False	AATAAA	-12	NA	20714801	20719086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20717808_20717896_20718052_20718168
ES.36749.19	chrX	+	1553	6	NNC	ENSMUSG00000001127.13	novel	1520	6	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	144.625862140905	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTATCTTTGTCCTTC	6293	False	NA	NA	False	AATAAA	-21	NA	20714801	20719137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718159
ES.36749.2	chrX	+	4233	6	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-16	33	intron_retention	FALSE	canonical	3	74	junction_1	121.295671810663	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAAAGAGGTGGAAC	1107	False	NA	NA	False	NA	NA	NA	20664036	20721782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20719699_20719798
ES.36749.20	chrX	+	2496	15	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	21	0	0	0	intron_retention	FALSE	non_canonical	1	66	junction_12	90.2516040899901	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6294	False	NA	23	True	NA	NA	NA	20714802	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
ES.36749.21	chrX	+	2429	15	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-4	intron_retention	FALSE	non_canonical	1	66	junction_11	90.1246585659699	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTTTGCTTGTTTAT	6294	False	NA	19	True	NA	NA	NA	20714802	20726754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.22	chrX	+	2205	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	21	132	0	-110	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTGCCTGATGTGT	6294	False	NA	20	True	NA	NA	NA	20714802	20726626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.23	chrX	+	3622	15	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	1	-3	intron_retention	FALSE	non_canonical	1	66	junction_11	89.0160499171758	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTTTGCTTGTTTATT	6295	False	NA	20	True	NA	NA	NA	20714803	20726755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.24	chrX	+	2461	17	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	14	combination_of_known_junctions	FALSE	non_canonical	1	1	junction_10	112.893184443305	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCCCGACTCTTC	6296	False	NA	37	True	NA	NA	NA	20714804	20726772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723649_20723762_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.25	chrX	+	4931	14	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	1	66	junction_10	92.2309296206984	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6296	False	NA	23	True	NA	NA	NA	20714804	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.26	chrX	+	6720	3	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	0	37	intron_retention	FALSE	canonical	3	195	junction_2	109.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGAGGTGGAACACAA	6296	False	NA	NA	False	NA	NA	NA	20714804	20721786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20719699_20719798
ES.36749.27	chrX	+	2182	16	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-107	combination_of_known_junctions	FALSE	non_canonical	1	12	junction_13	103.468642592816	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCCTGATGTGTCTT	6296	False	NA	23	True	NA	NA	NA	20714804	20726629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
ES.36749.28	chrX	+	3904	9	NNC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	0	28	intron_retention	FALSE	non_canonical	0	0	junction_8	124.582741079975	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCAAAGAGGT	6296	False	NA	NA	False	NA	NA	NA	20714804	20721777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720143
ES.36749.29	chrX	+	1602	7	NNC	ENSMUSG00000001127.13	novel	1520	6	NA	NA	4	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.080344220699	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATGTCATTATGA	6300	False	NA	NA	False	AATAAA	-12	NA	20714808	20719086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20715907_20716024_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ES.36749.3	chrX	+	4281	5	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-8	0	intron_retention	FALSE	canonical	3	74	junction_1	132.533722123843	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1115	False	NA	NA	False	NA	NA	NA	20664044	20721749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20719699_20719798
ES.36749.30	chrX	+	5959	10	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	4	-3	intron_retention	FALSE	non_canonical	1	66	junction_8	101.949636561695	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTTTGCTTGTTTATT	6300	False	NA	20	True	NA	NA	NA	20714808	20726755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20717808_20717896_20718052_20718168_20719699_20719798_20720355_20723850_20724028_20724116_20724164_20724632_20726059_20726217
ES.36749.31	chrX	+	1477	11	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	115.601081309822	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCGTTGTGTAGTTATT	6303	False	NA	NA	False	NA	NA	NA	20714811	20720798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20720498
ES.36749.32	chrX	+	5499	5	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	-2	29	intron_retention	FALSE	canonical	3	195	junction_4	79.4492762710901	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCCAAAGAGGTG	6303	False	NA	NA	False	NA	NA	NA	20714811	20721778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20719699_20719798
ES.36749.33	chrX	+	5322	7	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	-2	37	intron_retention	FALSE	canonical	3	193	junction_6	87.2596699512438	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGAGGTGGAACACAA	6303	False	NA	NA	False	NA	NA	NA	20714811	20721786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.34	chrX	+	2563	10	FSM	ENSMUSG00000001127.13	ENSMUST00000152955.8	2581	10	11	7	0	-7	multi-exon	FALSE	canonical	3	168	junction_6	87.3856218927361	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6305	False	NA	NA	False	NA	NA	NA	20714813	20721742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.35	chrX	+	1063	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	-3	460	0	215	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTATTTCACTTATGT	6305	False	NA	NA	False	AATAAA	-19	NA	20714813	20718668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ES.36749.36	chrX	+	3483	15	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-110	intron_retention	FALSE	non_canonical	1	66	junction_11	89.0160499171758	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTGCCTGATGTGT	6305	False	NA	20	True	NA	NA	NA	20714813	20726626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.37	chrX	+	1737	4	NNC	ENSMUSG00000001127.13	novel	826	8	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_1	181.614977355944	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATCTTTGTCCTTCATT	6306	False	NA	NA	False	AATAAA	-24	NA	20714814	20719140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716168_20716322_20716483_20716588_20717704
ES.36749.38	chrX	+	4934	14	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	1	1	intron_retention	FALSE	non_canonical	1	1	junction_1	103.691737044766	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	6306	False	NA	24	True	NA	NA	NA	20714814	20726759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20714963_20716322_20716483_20716588_20717704_20717808_20717896_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.4	chrX	+	2631	10	ISM	ENSMUSG00000001127.13	ENSMUST00000136451.8	2439	17	-7	4956	-7	31	5prime_fragment	FALSE	canonical	3	74	junction_1	106.497898895405	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCAAAGAGGTGGA	1116	False	NA	NA	False	NA	NA	NA	20664045	20721780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.40	chrX	+	5193	8	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	1	28	intron_retention	FALSE	canonical	3	193	junction_7	86.6449475663498	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCAAAGAGGT	6306	False	NA	NA	False	NA	NA	NA	20714814	20721777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.41	chrX	+	4008	11	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	1	1583	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	115.601081309822	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCGGACTCTAGATTCTT	6306	False	NA	NA	False	NA	NA	NA	20714814	20723332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20720498
ES.36749.42	chrX	+	2440	17	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_7	109.660199594019	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCTTGTTTATTTT	6306	False	NA	22	True	NA	NA	NA	20714814	20726757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834_20718951_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.43	chrX	+	2960	4	NNC	ENSMUSG00000001127.13	novel	2854	5	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	158.276832024006	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATCTTTGTCCTTCATT	6306	False	NA	NA	False	AATAAA	-24	NA	20714814	20719140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20716324_20716483_20716588_20717704_20717808_20717896
ES.36749.44	chrX	+	5734	16	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	1	2	intron_retention	FALSE	non_canonical	1	16	junction_10	102.92383375854	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGCT	6306	False	NA	25	True	NA	NA	NA	20714814	20726760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20723762_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.45	chrX	+	4161	2	ISM	ENSMUSG00000001127.13	ENSMUST00000122312.8	2854	5	10	6	1	-6	intron_retention	FALSE	canonical	3	414	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTATCTTTGTCCTTC	6306	False	NA	NA	False	AATAAA	-21	NA	20714814	20719137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20716322_20716483
ES.36749.46	chrX	+	5057	7	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	1	32	intron_retention	FALSE	canonical	0	0	junction_6	139.959220251234	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAAGAGGTGGAA	6306	False	NA	NA	False	NA	NA	NA	20714814	20721781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20720151
ES.36749.47	chrX	+	2457	11	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	1	32	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	115.601081309822	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAAGAGGTGGAA	6306	False	NA	NA	False	NA	NA	NA	20714814	20721781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20720498
ES.36749.48	chrX	+	2791	8	ISM	ENSMUSG00000001127.13	ENSMUST00000152955.8	2581	10	12	-37	1	37	intron_retention	FALSE	canonical	3	168	junction_6	88.4757547787724	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGAGGTGGAACACAA	6306	False	NA	NA	False	NA	NA	NA	20714814	20721786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798
ES.36749.49	chrX	+	3894	9	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	1	36	intron_retention	FALSE	canonical	3	193	junction_8	84.5011094601722	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAAAGAGGTGGAACACA	6306	False	NA	NA	False	NA	NA	NA	20714814	20721785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.5	chrX	+	3759	14	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-3	1	intron_retention	FALSE	non_canonical	1	66	junction_10	93.7091686230524	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	1120	False	NA	24	True	NA	NA	NA	20664049	20726759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.50	chrX	+	2590	17	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	113.792419974926	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCTTGTTTATTTTGC	6308	False	NA	24	True	NA	NA	NA	20714816	20726759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718418_20718834_20718951_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.51	chrX	+	3675	6	NNC	ENSMUSG00000001127.13	novel	1520	6	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_3	182.373243651584	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTTTGTCCTTCATTG	6308	False	NA	NA	False	AATAAA	-25	NA	20714816	20719141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20714963_20716322_20716483_20717528_20717704_20717808_20717896_20718052_20718168
ES.36749.53	chrX	+	4650	15	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-105	intron_retention	FALSE	non_canonical	1	1	junction_1	107.872751945266	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTGATGTGTCTTCA	6308	False	NA	25	True	NA	NA	NA	20714816	20726631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20716024_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.54	chrX	+	6969	1	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	0	36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAAAGAGGTGGAACACA	6308	False	NA	NA	False	NA	NA	NA	20714816	20721785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20714800_20721800
ES.36749.55	chrX	+	4787	14	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-110	intron_retention	FALSE	non_canonical	1	66	junction_10	92.2309296206984	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTTTGCCTGATGTGT	6308	False	NA	20	True	NA	NA	NA	20714816	20726626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.57	chrX	+	2406	15	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_10	104.612623618797	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6310	False	NA	23	True	NA	NA	NA	20714818	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724120_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.58	chrX	+	2176	15	NNC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	108.56456745238	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTTTGCCTGATGTG	6312	False	NA	19	True	NA	NA	NA	20714820	20726625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719897_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.59	chrX	+	5283	7	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	2	37	intron_retention	FALSE	canonical	3	193	junction_6	92.602045813734	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGAGGTGGAACACAA	6314	False	NA	NA	False	NA	NA	NA	20714822	20721786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.6	chrX	+	7304	12	NNC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	131.380087047951	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTTTGCTTGTTTATT	1120	False	NA	20	True	NA	NA	NA	20664049	20726755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718159_20719699_20719798_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
ES.36749.60	chrX	+	2855	8	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	174	-1	intron_retention	FALSE	canonical	3	168	junction_4	89.5635676659948	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCGTTGTGTAGTTATT	6493	False	NA	NA	False	NA	NA	NA	20715001	20720798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.61	chrX	+	2669	4	NIC	ENSMUSG00000001127.13	novel	2854	5	NA	NA	199	-37	intron_retention	FALSE	canonical	3	348	junction_2	27.6325090347503	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTCATTATGATATGT	6518	False	NA	NA	False	AATAAA	-17	NA	20715026	20719091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20716588_20717704_20718052_20718168
ES.36749.62	chrX	+	3099	9	ISM	ENSMUSG00000001127.13	ENSMUST00000152955.8	2581	10	820	-31	795	31	3prime_fragment	FALSE	canonical	3	168	junction_5	90.7268393310381	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCAAAGAGGTGGA	7114	False	NA	NA	False	NA	NA	NA	20715622	20721780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151
ES.36749.63	chrX	+	5462	4	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	1139	30	intron_retention	FALSE	canonical	3	195	junction_3	89.7861657247683	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCCAAAGAGGTGG	7458	False	NA	NA	False	NA	NA	NA	20715966	20721779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716322_20716483_20717808_20717896_20719699_20719798
ES.36749.64	chrX	+	2582	8	ISM	ENSMUSG00000001127.13	ENSMUST00000152955.8	2581	10	1439	-37	-1127	37	intron_retention	FALSE	canonical	3	168	junction_5	91.0270199849854	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGAGGTGGAACACAA	7733	False	NA	NA	False	NA	NA	NA	20716241	20721786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915
ES.36749.65	chrX	+	3042	3	NIC	ENSMUSG00000001127.13	novel	2581	10	NA	NA	-826	2	intron_retention	FALSE	canonical	3	195	junction_2	76.5	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTGTGTAGTTATTATA	8034	False	NA	NA	False	NA	NA	NA	20716542	20720801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20716588_20717704_20719699_20719798
ES.36749.66	chrX	+	5250	5	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	2854	2	intron_retention	FALSE	canonical	3	177	junction_1	14.9248115565993	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGCT	411	False	NA	25	True	NA	NA	NA	20720222	20726760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20724028_20724116_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.67	chrX	+	3459	5	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	6285	635	-2895	-324	internal_fragment	FALSE	non_canonical	1	66	junction_2	59.4868682988103	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTGAACCATGTT	1255	False	NA	NA	False	AGTAAA	-15	NA	20721066	20726123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
ES.36749.68	chrX	+	3091	5	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	7288	0	-1892	0	intron_retention	FALSE	non_canonical	1	66	junction_2	59.4868682988103	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	2258	False	NA	23	True	NA	NA	NA	20722069	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923
ES.36749.69	chrX	+	3129	2	ISM	ENSMUSG00000001127.13	ENSMUST00000128250.3	705	6	-426	-306	-426	-5	intron_retention	FALSE	canonical	3	177	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTTTGCTTGTTTA	3724	False	NA	18	True	NA	NA	NA	20723535	20726753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20724028_20724116
ES.36749.7	chrX	+	1553	6	ISM	ENSMUSG00000001127.13	ENSMUST00000136451.8	2439	17	-2	7603	-2	5	5prime_fragment	FALSE	canonical	3	74	junction_1	119.456100723236	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAACTATCTTTGTC	1121	False	NA	NA	False	AATAAA	-17	NA	20664050	20719133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ES.36749.8	chrX	+	7116	14	NNC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	-1	-2	intron_retention	FALSE	canonical	1	3	junction_10	110.619129068965	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTTTGCTTGTTTATTT	1122	False	NA	21	True	NA	NA	NA	20664051	20726756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798_20719827_20719915_20720056_20720151_20724028_20724116_20724164_20724649_20724752_20724980_20725113_20725923_20726059_20726217
ES.36749.9	chrX	+	4096	7	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	2	31	intron_retention	FALSE	canonical	3	74	junction_1	116.525271460267	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCAAAGAGGTGGA	1125	False	NA	NA	False	NA	NA	NA	20664054	20721780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20719699_20719798
ES.3675.1	chr10	+	7364	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	79.1567274462506	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750189	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846073_98846163_98846548_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.12	chr10	+	4728	22	NNC	ENSMUSG00000019943.11	novel	1460	6	NA	NA	226	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.1802274389672	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTTTAGTCTTTTT	NA	False	NA	6	True	ATTAAA	-15	NA	98750493	98859938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669_98859113_98859389
ES.3675.13	chr10	+	5062	22	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	227	251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.7431045777098	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAACCTTTAGTCTTT	NA	False	NA	4	True	ATTAAA	-13	NA	98750494	98859936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826929_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98836320_98836387_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.15	chr10	+	4807	20	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	238	259	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	61.1086857013309	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTAGTCTTTTTTTTTTT	NA	False	NA	12	True	ATTAAA	-21	NA	98750505	98859944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.16	chr10	+	7033	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	241	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.608807115798	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGGGGACTGAACTT	NA	False	NA	6	True	AATAAA	-18	NA	98750508	98861999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826941_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.17	chr10	+	8520	17	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	248	254	intron_retention	FALSE	canonical	3	221	junction_9	24.9145414366791	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCTTTAGTCTTTTTT	NA	False	NA	7	True	ATTAAA	-16	NA	98750515	98859939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.18	chr10	+	9515	18	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	248	256	intron_retention	FALSE	canonical	3	221	junction_9	25.1000765104501	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98750515	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98846152_98846535_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.19	chr10	+	10185	18	NIC	ENSMUSG00000019943.11	novel	1249	4	NA	NA	253	-4	intron_retention	FALSE	canonical	3	221	junction_9	23.7895909312918	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGGGACTGAACTTTT	NA	False	NA	8	True	AATAAA	-20	NA	98750520	98862001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850960_98851345_98854760_98858669
ES.3675.2	chr10	+	5300	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-63	259	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTAGTCTTTTTTTTTTT	NA	False	NA	12	True	ATTAAA	-21	NA	98750204	98859944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.20	chr10	+	4819	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	254	95	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTTTAATTTTTA	NA	False	NA	NA	False	AATACA	-21	NA	98750521	98859780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.21	chr10	+	5322	22	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	258	515	combination_of_known_junctions	FALSE	canonical	3	6	junction_20	76.3503679415316	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGCTCCTTGGTTCTC	NA	False	NA	28	True	AATAAA	-45	NA	98750525	98860200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855227_98858669
ES.3675.22	chr10	+	7011	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	259	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	60.426318769225	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATGGGGACTGAACT	NA	False	NA	5	True	AATAAA	-17	NA	98750526	98861998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832824_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.23	chr10	+	7126	22	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	259	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_20	76.3503679415316	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750526	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855227_98858669
ES.3675.24	chr10	+	8650	20	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	259	0	intron_retention	FALSE	canonical	3	221	junction_9	24.4330732666212	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750526	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.26	chr10	+	6924	22	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	261	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.1802274389672	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAATGGGGACTGAAC	NA	False	NA	4	True	AATAAA	-16	NA	98750528	98861997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669_98858815_98858919
ES.3675.27	chr10	+	4813	20	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	269	473	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	59.9236818414003	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTTTTATTAAATAAAT	NA	False	NA	-14	True	AATAAA	-3	NA	98750536	98860158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837268_98845272_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.28	chr10	+	6473	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	269	-556	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGCAAGCTGTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	98750536	98861449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.3	chr10	+	4498	21	NIC	ENSMUSG00000019943.11	novel	1460	6	NA	NA	-53	-165	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGACTGAGGGTGCTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	98750214	98859152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.30	chr10	+	4847	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	275	254	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	90.6731906353802	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCTTTAGTCTTTTTT	NA	False	NA	7	True	ATTAAA	-16	NA	98750542	98859939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98776389_98776472_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.32	chr10	+	4871	22	NNC	ENSMUSG00000019943.11	novel	1460	6	NA	NA	278	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	59.1802274389672	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98750545	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669_98859354_98859438
ES.3675.33	chr10	+	6084	15	NIC	ENSMUSG00000019943.11	novel	1249	4	NA	NA	289	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	67.0324319921	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGGGGACTGAACTTTT	NA	False	NA	8	True	AATAAA	-20	NA	98750556	98862001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98854576_98854760_98858669
ES.3675.34	chr10	+	5145	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	293	512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.5716724220159	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTCAGCTCCTTGGTT	NA	False	NA	25	True	AATAAA	-42	NA	98750560	98860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850372_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.35	chr10	+	6914	20	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	294	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	60.9035839454142	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	NA	False	NA	10	True	AATAAA	-22	NA	98750561	98862003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.38	chr10	+	5704	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-378	1804	368	516	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGCTCCTTGGTTCTCT	NA	False	NA	29	True	AATAAA	-25	NA	98750635	98860201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.39	chr10	+	5425	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-355	2060	-355	260	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTAGTCTTTTTTTTTTTT	NA	False	NA	13	True	ATTAAA	-22	NA	98750658	98859945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.4	chr10	+	4574	20	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-48	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	81.3314071188586	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAGGTTTGTAGATACT	NA	False	NA	0	True	TATAAA	-15	NA	98750219	98859423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846061_98846152_98846535_98846643_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.40	chr10	+	7292	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-162	0	-162	0	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750851	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.41	chr10	+	4653	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-101	2578	-101	-4	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTGTAGATACTTTTT	NA	False	NA	4	True	TATAAA	-19	NA	98750912	98859427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.42	chr10	+	5238	21	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-26	492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.7103340117045	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGCAATGGTTCTTCA	NA	False	NA	5	True	AATAAA	-22	NA	98750987	98860177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823139_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.43	chr10	+	4825	22	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-23	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	95.1978248193736	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98750990	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845387_98846063_98846152_98846535_98846643_98850320_98850356_98850424_98850492_98850860_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.44	chr10	+	4923	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	-18	2225	-18	95	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTTTAATTTTTA	NA	False	NA	NA	False	AATACA	-21	NA	98750995	98859780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.45	chr10	+	5005	22	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-18	259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	67.1555543549871	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTAGTCTTTTTTTTTTT	NA	False	NA	12	True	ATTAAA	-21	NA	98750995	98859944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835663_98835744_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.46	chr10	+	4797	22	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-6	256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	67.1555543549871	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98751007	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669_98859562_98859836
ES.3675.47	chr10	+	4641	20	NIC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-6	256	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	62.1450363276602	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98751007	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98751234_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.48	chr10	+	4874	20	NIC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-5	251	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	69.2680369422164	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAACCTTTAGTCTTT	NA	False	NA	4	True	ATTAAA	-13	NA	98751008	98859936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.49	chr10	+	4912	21	NIC	ENSMUSG00000019943.11	novel	1588	9	NA	NA	10	259	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60.5716724220159	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTAGTCTTTTTTTTTTT	NA	False	NA	12	True	ATTAAA	-21	NA	98751343	98859944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98751407_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.5	chr10	+	5543	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-47	518	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTCCTTGGTTCTCTAC	NA	False	NA	31	True	AATAAA	-27	NA	98750220	98860203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.50	chr10	+	4694	21	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	86	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.5716724220159	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAGAAAAAA	NA	False	NA	NA	False	GATAAA	-45	NA	98751419	98859648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98751561_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.52	chr10	+	4083	19	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	821	253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	63.8446465170643	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTTTAGTCTTTTT	NA	False	NA	6	True	ATTAAA	-15	NA	98822813	98859938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850791_98850860_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.53	chr10	+	6027	17	ISM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	72088	0	1109	0	3prime_fragment	FALSE	canonical	3	221	junction_5	26.0971741765272	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98823101	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.54	chr10	+	4543	1	FSM	ENSMUSG00000019943.11	ENSMUST00000220358.2	3688	1	-839	-16	-839	16	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTCGAAATGTTTATCA	NA	False	NA	NA	False	NA	NA	NA	98825902	98830445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98825900_98830400
ES.3675.55	chr10	+	3308	3	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-1496	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.5	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGGGGACTGAACTT	NA	False	NA	6	True	AATAAA	-18	NA	98835807	98861999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98835844_98837149_98837256_98858833
ES.3675.56	chr10	+	3499	12	NIC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-530	256	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	104.238442489141	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTAGTCTTTTTTTT	NA	False	NA	9	True	ATTAAA	-18	NA	98836773	98859941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855227_98858669
ES.3675.57	chr10	+	6524	9	NIC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	1717	0	intron_retention	FALSE	canonical	3	247	junction_2	21.1479165640495	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98839020	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98854760_98858669
ES.3675.58	chr10	+	2779	7	ISM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	88080	8809	1790	225	intron_retention	FALSE	canonical	3	247	junction_2	23.2355092237913	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGTTAATATTTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	98839093	98853196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345
ES.3675.59	chr10	+	2438	6	ISM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	99306	1808	-435	512	3prime_fragment	FALSE	canonical	3	260	junction_5	9.71596624119289	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCTCAGCTCCTTGGTT	NA	False	NA	25	True	AATAAA	-42	NA	98850319	98860197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.6	chr10	+	5084	20	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-40	249	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	61.8853376321921	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGAAACCTTTAGTCT	NA	False	NA	2	True	ATTAAA	-11	NA	98750227	98859934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98858669
ES.3675.60	chr10	+	4236	7	NNC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	-412	1457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	101.384444347028	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAATGCATAAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	98850342	98863462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669_98861992_98863435
ES.3675.61	chr10	+	1561	3	ISM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	101768	2069	1874	251	3prime_fragment	FALSE	canonical	3	260	junction_2	2	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAACCTTTAGTCTTT	NA	False	NA	4	True	ATTAAA	-13	NA	98852781	98859936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_98852893_98854576_98854760_98858669
ES.3675.62	chr10	+	4508	1	NIC	ENSMUSG00000019943.11	novel	7130	21	NA	NA	2597	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	NA	False	NA	10	True	AATAAA	-22	NA	98857495	98862003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98857500_98862000
ES.3675.7	chr10	+	4751	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-28	-1	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTAGATACTTTTTTTG	NA	False	NA	7	True	TATAAA	-22	NA	98750239	98859430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.8	chr10	+	7403	22	NNC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	75.2208841073787	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750244	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98750656_98776389_98776472_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.3675.9	chr10	+	7319	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98750246	98862005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ES.36750.1	chrX	+	891	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	-9	1	-9	-1	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTCTGTATAGTG	NA	False	NA	15	True	AATAAA	-16	NA	20736395	20740971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ES.36750.2	chrX	+	806	5	NIC	ENSMUSG00000001131.12	novel	883	6	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	293.187226870476	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATATTTCTGTATAGTG	NA	False	NA	15	True	AATAAA	-16	NA	20736400	20740971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20736564_20737272_20737402_20739288_20739416_20739606_20739732_20740709
ES.36750.3	chrX	+	2500	5	NIC	ENSMUSG00000001131.12	novel	883	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	578	junction_1	73.7478813254998	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTGTATAGTGTTT	NA	False	NA	18	True	AATAAA	-19	NA	20736403	20740974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20736564_20737272_20739096_20739288_20739416_20739606_20739732_20740709
ES.36750.5	chrX	+	2615	4	NIC	ENSMUSG00000001131.12	novel	833	6	NA	NA	22	0	intron_retention	FALSE	canonical	3	578	junction_1	77.0165927288111	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTGTATAGTGTTT	NA	False	NA	18	True	AATAAA	-19	NA	20736481	20740974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_20736564_20737272_20739416_20739606_20739732_20740709
ES.36751.1	chrX	+	2792	1	Intergenic	novelGene_30108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCTACTTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	20752424	20755216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20752400_20755200
ES.36752.1	chrX	+	205	1	Intergenic	novelGene_30109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGCAAATGGATGGAAC	NA	False	NA	NA	False	NA	NA	NA	20757133	20757338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20757100_20757300
ES.36753.1	chrX	+	174	1	Intergenic	novelGene_30110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTTGGATATTGTC	NA	False	NA	NA	False	NA	NA	NA	20762593	20762767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_20762600_20762800
ES.36754.1	chrX	+	3702	2	Antisense	novelGene_ENSMUSG00000001134.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGACTTGTTCTAAATGT	NA	False	NA	NA	False	AAAAAG	-10	NA	20819490	20823233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_20821959_20821999
ES.36755.1	chrX	+	948	6	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	-10	608	intron_retention	FALSE	non_canonical	0	0	junction_1	58.5504910312458	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20827912	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828218_20828756_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
ES.36755.10	chrX	+	671	7	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-9	26452	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	65.9621103361619	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTATAAGATTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828343	20879428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828741_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321_20853522_20879366
ES.36755.11	chrX	+	1560	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-9	608	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	48.9744831519435	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828343	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828775_20828835_20833967_20834048_20851664_20851705_20852228
ES.36755.12	chrX	+	649	6	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-9	608	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	45.9451847313731	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828343	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828775_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
ES.36755.13	chrX	+	710	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-8	-846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3648826841678	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATATTTCTCTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	20828344	20852116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828749_20828835_20833967_20834048_20838516_20838586_20851664
ES.36755.14	chrX	+	2488	3	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-6	608	intron_retention	FALSE	canonical	3	138	junction_1	14	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828346	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828835_20833967_20834048_20851664
ES.36755.15	chrX	+	1044	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	605	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	30.3016088681773	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGATTTGCCATGGTCA	NA	False	NA	0	True	NA	NA	NA	20828352	20853581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
ES.36755.16	chrX	+	1036	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	608	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828352	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
ES.36755.17	chrX	+	2542	4	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	1	26452	intron_retention	FALSE	non_canonical	0	0	junction_3	72.7293307789612	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTATAAGATTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828353	20879428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828897_20833967_20834048_20851664_20853526_20879370
ES.36755.18	chrX	+	2099	5	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	1	608	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	28.6563692745609	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828353	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828897_20833967_20834048_20838516_20838586_20851664_20851705_20852217
ES.36755.19	chrX	+	2612	4	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	1	608	intron_retention	FALSE	canonical	2	8	junction_3	7.76029781788188	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828353	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828897_20833967_20834048_20838516_20838586_20851664
ES.36755.2	chrX	+	2279	4	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	75	608	intron_retention	FALSE	canonical	3	18	junction_1	64.1941499584572	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20827997	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828218_20828775_20828835_20833967_20834048_20851664
ES.36755.20	chrX	+	2030	4	ISM	ENSMUSG00000086877.8	ENSMUST00000123462.8	1144	6	431	-622	1	608	3prime_fragment	FALSE	canonical	3	27	junction_1	57.1567046713585	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828353	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_20828897_20833967_20834048_20851664_20851705_20852217
ES.36755.21	chrX	+	1108	5	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	1	608	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	52.6355393246806	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828353	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828897_20833967_20834048_20851664_20851705_20852217_20852400_20853321
ES.36755.22	chrX	+	791	7	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	14	615	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	53.6459587377175	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCATTGTGTTTGT	NA	False	NA	10	True	NA	NA	NA	20828366	20853591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828458_20828775_20828835_20833967_20834048_20838516_20838586_20851664_20851705_20852217_20852400_20853321
ES.36755.23	chrX	+	715	6	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	14	608	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	49.9015029833772	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828366	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828458_20828775_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
ES.36755.24	chrX	+	1669	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	16	600	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	55.6619259458384	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTATAAGATTTGCCAT	NA	False	NA	-5	True	NA	NA	NA	20828368	20853576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828511_20828775_20828835_20833967_20834048_20851664_20851705_20852228
ES.36755.25	chrX	+	1020	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	118	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.3936116655298	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTACATCATGAATGC	NA	False	NA	NA	False	ATTAAA	-24	NA	20828470	20852969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828511_20828726_20828835_20833967_20834048_20851664_20851705_20852217
ES.36755.26	chrX	+	1724	4	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	234	608	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	30.9443945740671	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828586	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228
ES.36755.3	chrX	+	1824	6	NNC	ENSMUSG00000086877.8	novel	1144	6	NA	NA	75	608	intron_retention	FALSE	canonical	2	8	junction_4	51.2468535619505	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20827997	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828218_20828775_20828835_20833967_20834048_20838516_20838586_20851664_20851705_20852228
ES.36755.4	chrX	+	693	6	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-42	611	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.9882746768689	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCATGGTCATTGTGT	NA	False	NA	6	True	NA	NA	NA	20828310	20853587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828756_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
ES.36755.5	chrX	+	1110	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-30	137	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	48.9744831519435	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATCATTTATTGT	NA	False	NA	NA	False	NA	NA	NA	20828322	20853113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828775_20828835_20833967_20834048_20851664_20851705_20852228
ES.36755.6	chrX	+	766	7	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-24	26452	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.4903093495449	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTATAAGATTTCCC	NA	False	NA	NA	False	NA	NA	NA	20828328	20879428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828734_20828897_20833967_20834048_20851664_20851705_20852217_20852400_20853321_20853552_20879396
ES.36755.7	chrX	+	1674	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-23	608	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	54.1265877365274	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828329	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828458_20828775_20828835_20833967_20834048_20851664_20851705_20852217
ES.36755.8	chrX	+	1609	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-9	608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.997519792449	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828343	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828726_20828835_20833967_20834048_20851664_20851705_20852228
ES.36755.9	chrX	+	2084	4	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	-9	608	intron_retention	FALSE	canonical	3	37	junction_1	55.4035698809703	103	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCATGGTCATTG	NA	False	NA	3	True	NA	NA	NA	20828343	20853584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_20828369_20828775_20828835_20833967_20834048_20851664
ES.36756.1	chrX	-	174	1	Intergenic	novelGene_30105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGGAAAAAAAGAATAATC	NA	False	NA	NA	False	NA	NA	NA	20679626	20679452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20679500_20679600
ES.36757.1	chrX	-	199	1	Intergenic	novelGene_30106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATACATTATATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20700142	20699943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20699900_20700100
ES.36758.1	chrX	-	1593	7	NNC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	17	90562	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.7918086657819	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCGGCTCCCATTGTTC	NA	False	NA	NA	False	NA	NA	NA	20816830	20709071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20709095_20801594_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ES.36758.10	chrX	-	2766	12	NNC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	2	-1326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.8343699820129	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATCTAAGTCCTCTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	20787155	20728079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731261_20731353_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.11	chrX	-	178	1	Intergenic	novelGene_30107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAAAGTGTGGAA	NA	False	NA	NA	False	NA	NA	NA	20733073	20732895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20732900_20733100
ES.36758.12	chrX	-	1458	6	NNC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	2	-38889	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.179155351579	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCAATTTATGGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	20787155	20765642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20766200_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.13	chrX	-	2125	6	NNC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	2	-44642	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.179155351579	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATAAAATATAATCATTA	NA	False	NA	NA	False	NA	NA	NA	20787155	20771395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20772620_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.14	chrX	-	177	1	Intergenic	novelGene_30111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	20789776	20789599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20789600_20789800
ES.36758.15	chrX	-	5305	3	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	-998	-73	intron_retention	FALSE	canonical	3	87	junction_2	23	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGATTCTGTAATGACG	NA	False	NA	0	True	AATAAA	-20	NA	20798792	20791765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20791999_20793519_20794366_20794566
ES.36758.16	chrX	-	1525	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	38	73	38	-73	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGATTCTGTAATGACG	NA	False	NA	0	True	AATAAA	-20	NA	20797756	20791765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
ES.36758.18	chrX	-	2009	10	NNC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	-1097	-75	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	40.3154230206423	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAGATTCTGTAATGA	NA	False	NA	-2	True	AATAAA	-18	NA	20798891	20791767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20791999_20793519_20793632_20793744_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629_20798187_20798864
ES.36758.19	chrX	-	3535	7	ISM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	-506	75	-506	-75	intron_retention	FALSE	canonical	3	67	junction_3	22.7082951070015	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAGATTCTGTAATGA	NA	False	NA	-2	True	AATAAA	-18	NA	20798300	20791767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834
ES.36758.2	chrX	-	3259	7	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	16	186106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.6550215184184	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCGGCTCCCATTGTTC	3261	False	NA	NA	False	NA	NA	NA	20928266	20709071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20709101_20895178_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20927806_20927904_20928181
ES.36758.20	chrX	-	3044	1	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	-961	-78	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20794814	20791770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20791800_20794800
ES.36758.21	chrX	-	5080	19	Fusion	ENSMUSG00000001134.10_ENSMUSG00000001128.8	novel	1636	9	NA	NA	-2	-79	intron_retention	FALSE	canonical	0	0	junction_10	246.708160924333	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20828215	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20798187_20802470_20802903_20803355_20803652_20803787_20803803_20807792_20808037_20816678_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.22	chrX	-	1301	8	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	82	-79	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	38.4819066946681	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20797712	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20791999_20793519_20793632_20793773_20793963_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
ES.36758.23	chrX	-	3151	7	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	15	-79	intron_retention	FALSE	canonical	3	58	junction_6	24.7773417998515	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20797779	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20791999_20793519_20793632_20793773_20794366_20794566_20794759_20794881_20795053_20795834_20797542_20797629
ES.36758.24	chrX	-	2820	14	Fusion	ENSMUSG00000001134.10_ENSMUSG00000001128.8	novel	1636	9	NA	NA	11344	-79	multi-exon	FALSE	canonical	0	0	junction_8	41.0110390680825	197	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20816810	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20798115_20798187_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ES.36758.25	chrX	-	1535	9	NNC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	14	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.1820990614348	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20797780	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20791991_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
ES.36758.26	chrX	-	1494	3	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	-1056	-79	intron_retention	FALSE	canonical	3	95	junction_2	19	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCTAAGATTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	20794909	20791771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20791999_20793519_20794759_20794881
ES.36758.28	chrX	-	3880	9	Fusion	ENSMUSG00000001128.8_ENSMUSG00000009406.14	novel	1636	9	NA	NA	-2811	-81	multi-exon	FALSE	canonical	0	0	junction_8	37.0723532433537	189	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTTTCTAAGATTCTG	NA	False	NA	-8	True	AATAAA	-12	NA	20800605	20791773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20798115
ES.36758.29	chrX	-	4543	3	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	1153	-82	intron_retention	FALSE	canonical	3	87	junction_1	4	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCTTTCTAAGATTCT	NA	False	NA	-9	True	AATAAA	-11	NA	20796641	20791774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20794366_20794566_20794759_20794881
ES.36758.3	chrX	-	4317	12	NIC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	-129	0	intron_retention	FALSE	canonical	3	43	junction_8	5.56405227203613	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTCTTGGTAAAG	NA	False	NA	2	True	AATAAA	-21	NA	20787372	20726749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.30	chrX	-	5121	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	-10	-1563	-10	1563	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAACTAAAGCTGAGAAT	NA	False	NA	NA	False	NA	NA	NA	20816857	20798070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ES.36758.31	chrX	-	4135	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	9	-596	9	596	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACAAAACAGTTGCA	NA	False	NA	NA	False	AATAAA	-18	NA	20816838	20799037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ES.36758.32	chrX	-	2987	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	31	530	31	-530	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCATGGTCTTATGTGT	NA	False	NA	NA	False	NA	NA	NA	20816816	20800163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ES.36758.33	chrX	-	4690	12	Fusion	ENSMUSG00000001134.10_ENSMUSG00000009406.14	novel	875	7	NA	NA	-1	-761	multi-exon	FALSE	canonical	3	96	junction_1	246.197293726021	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20828231	20800394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.34	chrX	-	3070	10	Fusion	ENSMUSG00000001134.10_ENSMUSG00000009406.14	novel	3548	6	NA	NA	-3	-761	multi-exon	FALSE	canonical	1	4	junction_5	264.516516789256	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20828259	20800394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.35	chrX	-	3085	10	Fusion	ENSMUSG00000001134.10_ENSMUSG00000009406.14	novel	3548	6	NA	NA	1	-761	multi-exon	FALSE	canonical	1	4	junction_5	267.186622715331	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGTATTTTTTTTTC	NA	False	NA	-1	True	AATATA	-24	NA	20828229	20800394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20825596_20825705_20825973_20826042_20826176_20826259_20827873_20828026_20828172
ES.36758.36	chrX	-	2619	7	NNC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	28	-765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.7918086657819	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGTTGGTATTTTTT	NA	False	NA	-5	True	AATATA	-20	NA	20816819	20800398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803652_20803787_20803803_20807792_20808037_20816678
ES.36758.37	chrX	-	6738	5	NIC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	35	-765	intron_retention	FALSE	canonical	3	96	junction_1	9.02773504263389	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGTTGGTATTTTTT	NA	False	NA	-5	True	AATATA	-20	NA	20816812	20800398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20808037_20816678
ES.36758.38	chrX	-	2706	7	NNC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	31	-766	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.7918086657819	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGTTGGTATTTTT	NA	False	NA	-6	True	AATATA	-19	NA	20816816	20800399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678_20816709_20816753
ES.36758.39	chrX	-	7206	4	NIC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	17	-768	intron_retention	FALSE	canonical	3	96	junction_1	8.52447456836295	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAAGCTGTTGGTATTT	NA	False	NA	-8	True	AATATA	-17	NA	20816830	20800401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20801788_20801869_20801972_20802470_20808037_20816678
ES.36758.4	chrX	-	3294	13	FSM	ENSMUSG00000037217.16	ENSMUST00000115345.8	3261	13	-37	4	-37	0	multi-exon	FALSE	canonical	3	14	junction_1	11.6198465279595	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	20787280	20726753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.40	chrX	-	3751	9	Fusion	ENSMUSG00000001134.10_ENSMUSG00000009406.14	novel	3548	6	NA	NA	158	-772	multi-exon	FALSE	canonical	1	3	junction_8	241.265284489916	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGAAAGCTGTTGGT	NA	False	NA	-12	True	AATATA	-13	NA	20827996	20800405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20825596_20825705_20825973_20826042_20826176_20826259_20827110
ES.36758.41	chrX	-	4271	7	FSM	ENSMUSG00000001134.10_ENSMUSG00000009406.14	ENSMUST00000123836.2	875	7	31	-3427	0	3427	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAATATCATTTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	20828225	20814473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.42	chrX	-	3122	7	FSM	ENSMUSG00000001134.10_ENSMUSG00000009406.14	ENSMUST00000123836.2	875	7	24	-2271	-2	2271	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTTGTTTGTTTGT	NA	False	NA	NA	False	CATAAA	-1	NA	20828232	20815629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.43	chrX	-	3647	6	Fusion	ENSMUSG00000001134.10_ENSMUSG00000009406.14	novel	659	6	NA	NA	352	2271	multi-exon	FALSE	canonical	2	3	junction_5	241.379866600344	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTTGTTTGTTTGT	NA	False	NA	NA	False	CATAAA	-1	NA	20827802	20815629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827110
ES.36758.44	chrX	-	846	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	27	2	1	-2	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAGATTCAATTGGTA	NA	False	NA	NA	False	CATAAA	-20	NA	20828229	20817902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.45	chrX	-	3085	3	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	0	-7	intron_retention	FALSE	canonical	3	628	junction_1	20	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGAAGATGAGATTCAAT	NA	False	NA	NA	False	CATAAA	-15	NA	20828225	20817907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20818511_20825596_20828026_20828172
ES.36758.46	chrX	-	724	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	27	124	1	-124	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATGCTTTACTCTCTT	NA	False	NA	NA	False	NA	NA	NA	20828229	20818024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.47	chrX	-	602	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	11	262	-6	-1	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATAGTCCTTTTTTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	20828245	20818162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.48	chrX	-	562	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	227.131386353068	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATAGTCCTTTTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	20828248	20818163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827960_20828026_20828172
ES.36758.49	chrX	-	548	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.209252722862	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATAGTCCTTTTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	20828204	20818163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20818255_20818450_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.5	chrX	-	3977	13	NNC	ENSMUSG00000037217.16	novel	3209	13	NA	NA	177	0	intron_retention	FALSE	canonical	0	0	junction_11	19.9415813481947	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	20786980	20726753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20780283_20780340_20786651
ES.36758.50	chrX	-	476	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	227.721760049408	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATAGTCCTTTTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	20828228	20818163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20818263_20818446_20818511_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.53	chrX	-	5916	2	NNC	ENSMUSG00000001134.10	novel	659	6	NA	NA	4034	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATAGTCCTTTTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	20824120	20818163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20821959_20821999
ES.36758.54	chrX	-	662	7	FSM	ENSMUSG00000001134.10	ENSMUST00000001162.10	636	7	-22	-4	-5	-2	multi-exon	FALSE	canonical	3	21	junction_5	225.323039705713	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATAGTCCTTTTTTC	NA	False	NA	-10	True	ATTAAA	-18	NA	20828261	20818163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827873_20828026_20828172
ES.36758.55	chrX	-	747	6	NIC	ENSMUSG00000001134.10	novel	875	7	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	539	junction_4	46.7478341744299	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGGAATCACATAGTC	NA	False	NA	-18	True	ATTAAA	-10	NA	20828215	20818171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ES.36758.56	chrX	-	5490	1	Intergenic	novelGene_30112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	20887001	20881511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20881500_20887000
ES.36758.57	chrX	-	8444	1	Intergenic	novelGene_30113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCGTCTGTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	20890984	20882540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_20882500_20891000
ES.36758.58	chrX	-	5933	5	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	16	2752	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.3261480900877	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATCTCAAGATCATAT	3261	False	NA	NA	False	AATAAA	-17	NA	20928266	20892425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902753_20902866_20903012_20926741_20926797_20928176
ES.36758.6	chrX	-	3208	13	FSM	ENSMUSG00000037217.16	ENSMUST00000081893.7	3209	13	0	1	0	-1	multi-exon	FALSE	canonical	1	4	junction_1	14.1330483461833	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTCTGTGCTTCTTGG	NA	False	NA	-3	True	AATAAA	-16	NA	20787157	20726754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20727849_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36758.60	chrX	-	6003	7	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	3	2750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.8599829551438	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGTATCTCAAGATCAT	3305	False	NA	NA	False	AATAAA	-15	NA	20928222	20892427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902711_20902866_20903012_20912638_20912744_20915842_20915896_20926741_20926797_20928176
ES.36758.61	chrX	-	5591	3	NIC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	-8	2748	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGTATCTCAAGATC	3277	False	NA	NA	False	AATAAA	-13	NA	20928250	20892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20897892_20926741_20926797_20928176
ES.36758.62	chrX	-	5871	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	41	-2752	-8	2748	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGGTATCTCAAGATC	3277	False	NA	NA	False	AATAAA	-13	NA	20928250	20892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.63	chrX	-	5459	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	-2	-2297	-2	2293	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGTTTTAAATTGAG	3234	False	NA	NA	False	ATTAAA	-14	NA	20928293	20892884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.64	chrX	-	5293	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	57	-2190	8	2186	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTGCCTATGCTATA	3293	False	NA	NA	False	AATAAA	-24	NA	20928234	20892991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.66	chrX	-	3600	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	46	-486	-3	482	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGTCTTGTTGTGGAT	3282	False	NA	NA	False	AATATA	-16	NA	20928245	20894695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.67	chrX	-	3203	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	-37	-6	-37	2	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTCCTTTAATGGTCA	3199	False	NA	1	True	TTTAAA	-7	NA	20928328	20895175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.68	chrX	-	3285	6	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	19.8937176012931	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTCCTTTAATGGT	3250	False	NA	-1	True	TTTAAA	-5	NA	20928277	20895177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902711_20902866_20903012_20925907_20926043_20926741_20926797_20928176
ES.36758.69	chrX	-	3055	4	NIC	ENSMUSG00000054737.12	novel	739	5	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	19.6015872373189	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGTATTCCTTTAATG	3283	False	NA	-3	True	TTTAAA	-3	NA	20928244	20895179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20897892_20902575_20902711_20902866_20903012_20928181
ES.36758.70	chrX	-	3066	4	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.0720922897661	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTGTATTCCTTTAA	3242	False	NA	-5	True	TTTAAA	-1	NA	20928285	20895181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902711_20902866_20903012_20928209
ES.36758.72	chrX	-	3193	5	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	19.3261480900877	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATATTGTATTCCTT	3242	False	NA	-8	True	NA	NA	NA	20928285	20895184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902753_20902866_20903012_20926741_20926797_20928176
ES.36758.73	chrX	-	3204	5	NNC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	-7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.753164303473	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATTTAAAACCATATTG	3278	False	NA	-16	True	NA	NA	NA	20928249	20895192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926894_20928176
ES.36758.74	chrX	-	7145	4	NNC	ENSMUSG00000054737.12	novel	3130	5	NA	NA	17274	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	19.6015872373189	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACTATATTTAAAA	9968	False	NA	-24	True	NA	NA	NA	20910951	20895200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20897892_20902575_20902711_20902866_20903012_20906777
ES.36758.75	chrX	-	3101	5	NIC	ENSMUSG00000054737.12	novel	3160	5	NA	NA	0	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.753164303473	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAACTATATTTAA	3245	False	NA	-26	True	NA	NA	NA	20928282	20895202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926768_20928176
ES.36758.76	chrX	-	2711	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	47	402	-2	244	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATGTGGATTCTGCTT	3283	False	NA	NA	False	NA	NA	NA	20928244	20895583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.77	chrX	-	697	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	25	2438	16	208	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTCTTCCATACAGA	3261	False	NA	NA	False	AATAAA	-19	NA	20928266	20897619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ES.36758.8	chrX	-	3070	12	NNC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	22.0217773507487	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAATTCTGTGCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	20787219	20726756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731266_20731357_20731501_20732084_20732148_20773315_20773406_20775575_20775668_20775763_20775822_20786651
ES.36758.9	chrX	-	4460	11	NIC	ENSMUSG00000037217.16	novel	3261	13	NA	NA	32	-5	intron_retention	FALSE	canonical	3	43	junction_7	4.88262224629348	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGAATTCTGTGCTTC	NA	False	NA	-7	True	AATAAA	-12	NA	20787211	20726758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20729330_20729421_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ES.36759.1	chrX	-	4649	5	NNC	ENSMUSG00000031079.13	novel	4634	5	NA	NA	-8	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.707106781186548	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGTGGAGCATGTGT	6539	False	NA	NA	False	NA	NA	NA	20955476	20945389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_20949528_20950146_20950240_20950454_20950582_20954760_20954820_20955244
ES.36759.2	chrX	-	3355	5	NIC	ENSMUSG00000031079.13	novel	4634	5	NA	NA	-59	-1082	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAAAATGATGCTTTT	6731	False	NA	NA	False	AATAAA	-17	NA	20955284	20946494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20949531_20950146_20950240_20950454_20950582_20954760_20954820_20955244
ES.36759.3	chrX	-	3609	5	NIC	ENSMUSG00000031079.13	novel	4634	5	NA	NA	12	-1298	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTTGTCTAAATTAC	6261	False	NA	NA	False	AAAAAG	-25	NA	20955754	20946710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_20949531_20950146_20950240_20950454_20950582_20954760_20954820_20955244
ES.36759.4	chrX	-	3343	5	FSM	ENSMUSG00000031079.13	ENSMUST00000040667.13	4634	5	-8	1299	-8	-1299	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCTTTGTCTAAATTA	6539	False	NA	NA	False	AAAAAG	-24	NA	20955476	20946711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_20949531_20950146_20950240_20950454_20950595_20954760_20954820_20955244
ES.3676.1	chr10	+	2947	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	1	-86	1	0	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	98942898	99033936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.10	chr10	+	3803	11	NNC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	20	-18822	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	26.0222981306417	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATATTTTTCTATGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	98942984	99009829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99007222
ES.3676.11	chr10	+	2993	2	FSM	ENSMUSG00000019952.16	ENSMUST00000220019.2	513	2	-649	-1831	32	1831	multi-exon	FALSE	canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGGCCTGGGGTTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	98942996	98946636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98943739_98944385
ES.3676.12	chr10	+	2723	11	NIC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	43	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	24.7030362506312	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98943007	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.13	chr10	+	3378	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	70	1	70	-1	multi-exon	FALSE	canonical	3	64	junction_10	9.48946784598589	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAATGTCTTCTCTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	98943034	99033935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.14	chr10	+	2629	11	NIC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	73	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.1809090751257	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98943037	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_98943086_98943653_98943739_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.15	chr10	+	2789	12	NNC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	98	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.2098629524764	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98943062	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965538_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.16	chr10	+	2656	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	-34	2467	-34	-2467	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGGGTTGATATATGT	NA	False	NA	NA	False	AATAAA	-29	NA	98943986	98946642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98944000_98946600
ES.3676.17	chr10	+	4744	2	NNC	ENSMUSG00000019952.16	novel	513	2	NA	NA	448	4297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAATTCTGATGATTTT	NA	False	NA	9	True	AATAAA	-23	NA	98944093	98949102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98947795_98948059
ES.3676.18	chr10	+	4677	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	2410	-1998	2410	1998	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTACTTAAAAAACAAACAAA	749	False	NA	NA	False	NA	NA	NA	98946430	98951107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98946400_98951100
ES.3676.2	chr10	+	2908	12	NNC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.2098629524764	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98942916	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965511_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.3	chr10	+	2869	12	NNC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3133810044545	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98942938	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943684_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.4	chr10	+	1801	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	50	1011	4	-51	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCCCCTCCCCCATAT	NA	False	NA	NA	False	AATAAA	-24	NA	98942947	99032839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.5	chr10	+	3129	13	NNC	ENSMUSG00000019952.16	novel	1902	13	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	31.5184029135713	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98942959	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99026399_99026650_99028643_99028860_99032487
ES.3676.6	chr10	+	5572	2	ISM	ENSMUSG00000019952.16	ENSMUST00000159228.8	1799	11	22	83809	1	4300	5prime_fragment	FALSE	canonical	3	95	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTCTGATGATTTTAGT	NA	False	NA	12	True	AATAAA	-26	NA	98942965	98949105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_98943086_98943653
ES.3676.7	chr10	+	3432	11	NNC	ENSMUSG00000019952.16	novel	3449	11	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_3	25.4049207831869	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	98942967	99033936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943739_98960692_98960865_98965344_98965511_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.3676.9	chr10	+	2926	12	NNC	ENSMUSG00000019952.16	novel	2862	12	NA	NA	20	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	23.7806783157467	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	98942984	99033929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_98943086_98943581_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ES.36760.1	chrX	-	171	1	Intergenic	novelGene_30114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAGAATTCA	9165	False	NA	NA	False	NA	NA	NA	21052856	21052685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_21052700_21052900
ES.36761.1	chrX	-	175	1	Intergenic	novelGene_30115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGAGTCATAGTG	NA	False	NA	NA	False	NA	NA	NA	21277523	21277348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_21277300_21277500
ES.36762.1	chrX	+	219	1	Intergenic	novelGene_30116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGGAAGGAGTTACA	NA	False	NA	NA	False	NA	NA	NA	21338590	21338809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_21338600_21338800
ES.36763.1	chrX	-	202	1	Intergenic	novelGene_30117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAATGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21495641	21495439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_21495400_21495600
ES.36764.1	chrX	-	218	1	Intergenic	novelGene_30118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCCGATGTAATTGT	NA	False	NA	NA	False	NA	NA	NA	21547839	21547621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_21547600_21547800
ES.36765.1	chrX	-	5893	1	FSM	ENSMUSG00000118511.2	ENSMUST00000239065.2	302	1	-64	-5527	-64	5527	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGTCATGGATCATAT	NA	False	NA	NA	False	AATAAA	-16	NA	22115409	22109516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_22109500_22115400
ES.36766.1	chrX	-	174	1	Intergenic	novelGene_30119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATCAAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	22492632	22492458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_22492500_22492600
ES.36767.1	chrX	-	207	1	Intergenic	novelGene_30120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTAGCCAAACTGCC	NA	False	NA	NA	False	AAAAAG	-4	NA	22523225	22523018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_22523000_22523200
ES.36768.1	chrX	+	4165	2	Antisense	novelGene_ENSMUSG00000036782.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGATACGCATTCTCC	NA	False	NA	NA	False	NA	NA	NA	23209553	23227538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_23212395_23226214
ES.36768.2	chrX	+	2904	1	Intergenic	novelGene_30122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23224606	23227510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_23224600_23227500
ES.36769.10	chrX	-	3311	8	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	377.683811176081	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181278_23181441_23227732
ES.36769.11	chrX	-	8235	2	ISM	ENSMUSG00000036782.14	ENSMUST00000115316.9	3064	7	31562	-1	31562	0	intron_retention	FALSE	canonical	3	949	junction_1	0	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23101479	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_23087092_23094812
ES.36769.13	chrX	-	3431	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3732	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	486.705361974778	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185150	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23150798_23150912_23181368_23181441_23184851
ES.36769.14	chrX	-	3082	7	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	395.962820925849	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23181368_23181441_23227732
ES.36769.16	chrX	-	3144	8	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	375.902505814408	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231319	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23231194
ES.36769.17	chrX	-	3459	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	496.176138080017	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23225889_23225919_23227367_23227511_23227732
ES.36769.18	chrX	-	3818	10	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	489.372639454755	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227934	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23225889_23225919_23226942_23227511_23227732
ES.36769.19	chrX	-	3984	12	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3362	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	501.332967000628	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23227930	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23221380_23221485_23225889_23225919_23226942_23227511_23227732
ES.36769.21	chrX	-	3311	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	471.687226878151	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23231301	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23225889_23225919_23227732_23227824_23231194
ES.36769.25	chrX	-	3347	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	480.952388495992	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23231299	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23221380_23221485_23225889_23225919_23227732_23227824_23231194
ES.36769.27	chrX	-	3196	10	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	223	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_7	485.405214457181	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23231069	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23225889_23225919_23227732_23227824_23231011
ES.36769.29	chrX	-	3171	7	NNC	ENSMUSG00000036782.14	novel	2996	7	NA	NA	-3725	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	458.169546492708	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23185143	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23181368_23181441_23184851
ES.36769.3	chrX	-	3335	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	-79	-5	-79	5	multi-exon	TRUE	canonical	3	241	junction_8	283.721694623446	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTCCTCAGTTTGATTT	NA	False	NA	-3	True	AATAAA	-34	NA	23231400	23085504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
ES.36769.30	chrX	-	3490	10	NNC	ENSMUSG00000036782.14	novel	3216	7	NA	NA	-3726	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	481.637741025604	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23185144	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23150798_23150912_23160453_23160520_23181368_23181441_23184851
ES.36769.33	chrX	-	3184	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	453.427071727086	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23231294	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23231194
ES.36769.34	chrX	-	3274	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	436.11466382134	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23227934	23085524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127685_23127813_23160453_23160520_23181368_23181441_23227732
ES.36769.35	chrX	-	3524	12	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	474.156441038728	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCTCTGTGCCATGC	NA	False	NA	-24	True	AATAAA	-13	NA	23231294	23085525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23184851_23185035_23221380_23221485_23225889_23225919_23227732_23227824_23231194
ES.36769.37	chrX	-	3458	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	450.342358656167	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23231296	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851_23185035_23227732_23227824_23231194
ES.36769.38	chrX	-	2746	5	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3361	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	444.652954561195	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23227931	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23181368_23181441_23227732
ES.36769.4	chrX	-	3307	10	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	389.833899418461	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTTACTCCTCAGTTT	NA	False	NA	-8	True	AATAAA	-29	NA	23231311	23085509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732_23227824_23231194
ES.36769.40	chrX	-	3390	10	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	489.219585124242	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23227934	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23225889_23225919_23227367_23227511_23227732
ES.36769.41	chrX	-	3361	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	484.220042955679	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23231290	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23150798_23150912_23151396_23151442_23181368_23181441_23227732_23227824_23231194
ES.36769.42	chrX	-	3919	11	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	506.785763414877	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23227934	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23221380_23221485_23225889_23225919_23226942_23227511_23227732
ES.36769.43	chrX	-	3142	8	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	438.45238030591	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCTCTGTGCCATG	NA	False	NA	-25	True	AATAAA	-12	NA	23231301	23085526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23227732_23227824_23231194
ES.36769.45	chrX	-	3285	10	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	457.947056080547	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTCTGCTCTGTGCC	NA	False	NA	-28	True	AATAAA	-9	NA	23231271	23085529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23221380_23221485_23227732_23227824_23231194
ES.36769.46	chrX	-	2005	4	NNC	ENSMUSG00000036782.14	novel	395	5	NA	NA	-3712	-11761	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_1	12.9185482500507	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTTTAAAGCAATATAAAA	NA	False	NA	NA	False	NA	NA	NA	23185130	23126224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23127813_23160453_23160520_23181368_23181441_23184851
ES.36769.47	chrX	-	157	1	Intergenic	novelGene_30121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	609	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	23184989	23184832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_23184800_23185000
ES.36769.8	chrX	-	3247	10	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_7	455.242819483579	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23231302	23085523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23225889_23225919_23227732_23227824_23231194
ES.3677.1	chr10	-	704	2	Genic_Genomic	ENSMUSG00000112346.2	novel	2290	1	NA	NA	1320	1912	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATAGGTGGAGGTAA	NA	False	NA	NA	False	CATAAA	-4	NA	98942622	98939740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_98939923_98942100
ES.3677.2	chr10	-	1856	1	FSM	ENSMUSG00000112346.2	ENSMUST00000218379.2	2290	1	26	408	26	-408	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTTCCCTCGCTGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	98943916	98942060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_98942100_98943900
ES.36770.1	chrX	-	3246	1	Intergenic	novelGene_30123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTCCATGTTTTCCTC	NA	False	NA	NA	False	AATAAA	-32	NA	23373955	23370709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_23370700_23374000
ES.36770.2	chrX	-	2492	5	Intergenic	novelGene_30124	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGATTTACAGATAG	NA	False	NA	NA	False	NA	NA	NA	23401508	23373154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_23374494_23396261_23396419_23396545_23396701_23399405_23399531_23400792
ES.36771.1	chrX	-	176	1	Intergenic	novelGene_30125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	23493366	23493190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_23493200_23493400
ES.36772.1	chrX	+	4266	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	-66	-33	-66	-2	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATTTACAATCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	23559223	23672262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.10	chrX	+	3877	20	NIC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	16.7403174147569	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559301	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.11	chrX	+	4089	20	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_17	15.6249321328166	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559343	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ES.36772.12	chrX	+	4148	20	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	10	12	intron_retention	FALSE	canonical	0	0	junction_18	15.3241973666078	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559344	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23669983_23670143_23671127
ES.36772.13	chrX	+	3949	20	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	10	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.9965735356191	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAGGTGAAATATTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	23559344	23672182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559509_23559590_23559779_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.14	chrX	+	4052	22	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	13	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	18.6018066564609	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559347	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23632226_23632313_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.15	chrX	+	5418	17	NIC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	13	12	intron_retention	FALSE	canonical	0	0	junction_1	16.8809017457599	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559347	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23559779_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23667075_23667278_23668682_23670007_23670143_23671127
ES.36772.16	chrX	+	4113	22	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	15	-39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.0960099594623	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTTTGAGATGACA	NA	False	NA	NA	False	ATTAAA	-26	NA	23559349	23672190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23643151_23643352_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.17	chrX	+	3787	20	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	289	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.488177959647	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559686	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624316_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.18	chrX	+	3757	20	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.0203924171658	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559689	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628590_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.19	chrX	+	3675	18	NNC	ENSMUSG00000036769.15	novel	2723	2	NA	NA	-23144	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3131127335902	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGATTTACAATCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	23619913	23672261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23619988_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.2	chrX	+	4162	19	NIC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	-22	7	intron_retention	FALSE	canonical	0	0	junction_1	16.0524795207916	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGATTGTCTTAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	23559267	23672236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23559779_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.20	chrX	+	4982	17	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	-20081	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.8072714918276	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23622976	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23643151_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.21	chrX	+	2794	15	ISM	ENSMUSG00000036769.15	ENSMUST00000101670.3	4002	21	66085	35	-17638	0	3prime_fragment	FALSE	canonical	3	33	junction_3	10.6080446947068	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23625419	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.22	chrX	+	2486	12	NNC	ENSMUSG00000036769.15	novel	2723	2	NA	NA	-121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0571129429147	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23642936	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23643055_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.23	chrX	+	4304	11	ISM	ENSMUSG00000036769.15	ENSMUST00000101670.3	4002	21	83604	23	-119	12	3prime_fragment	FALSE	canonical	3	41	junction_2	10.1533245786787	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23642938	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.24	chrX	+	2696	13	NNC	ENSMUSG00000036769.15	novel	2723	2	NA	NA	-119	12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.8696487365533	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23642938	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23643055_23643151_23643352_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.25	chrX	+	5472	10	NIC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	-108	-3	intron_retention	FALSE	canonical	3	41	junction_2	10.6770782520313	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGATTTACAATCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	23642949	23672261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23668682_23670007_23670143_23671127
ES.36772.26	chrX	+	609	1	Intergenic	novelGene_30126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTAGGAACACAAGGAA	NA	False	NA	NA	False	NA	NA	NA	23645379	23645988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_23645400_23646000
ES.36772.27	chrX	+	3352	1	NIC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	25774	-46	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGTGAAATATTTTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	23668831	23672183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23668800_23672200
ES.36772.3	chrX	+	4045	21	FSM	ENSMUSG00000036769.15	ENSMUST00000101670.3	4002	21	-66	23	-21	12	multi-exon	FALSE	canonical	3	24	junction_1	11.664475984801	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559268	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.4	chrX	+	3713	3	NNC	ENSMUSG00000036769.15	novel	4167	20	NA	NA	0	-15728	intron_retention	FALSE	canonical	0	0	junction_2	27.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGAACTTTAAATTC	NA	False	NA	NA	False	NA	NA	NA	23559289	23602210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559779_23598556_23598591_23599020
ES.36772.5	chrX	+	4095	21	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	2	12	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.7474574079738	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTAATTTGACTT	NA	False	NA	NA	False	AATAAA	-1	NA	23559291	23672241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559509_23559590_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.6	chrX	+	3195	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	2	970	2	-970	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATATGTATCATAAATGA	NA	False	NA	NA	False	AATAAA	-15	NA	23559291	23671259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.7	chrX	+	4121	22	NNC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.8768117738622	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559301	23672229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_23559509_23559590_23559779_23562890_23562939_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36772.9	chrX	+	4005	20	NIC	ENSMUSG00000036769.15	novel	4002	21	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16.7786634064329	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACAATCTCTACATTAT	NA	False	NA	NA	False	AATAAA	-28	NA	23559301	23672268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_23559509_23559663_23559779_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ES.36773.1	chrX	-	121	1	Intergenic	novelGene_30127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	25171332	25171211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_25171200_25171300
ES.36774.1	chrX	-	1401	1	Intergenic	novelGene_30128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGAACCAAATGA	NA	False	NA	NA	False	NA	NA	NA	29485801	29484400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_29484400_29485800
ES.36775.1	chrX	+	1571	4	NNC	ENSMUSG00000085060.2	novel	1959	4	NA	NA	20105	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTTCTTTTACTATGA	NA	False	NA	NA	False	NA	NA	NA	29807060	29836662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_29807255_29820772_29820942_29835159_29835271_29835565
ES.36775.2	chrX	+	920	1	Genic_Genomic	ENSMUSG00000085060.2	novel	NA	NA	NA	NA	49158	35	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAAAATGGTATTTGTA	NA	False	NA	NA	False	NA	NA	NA	29836113	29837033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_29836100_29837000
ES.36776.1	chrX	+	587	6	NNC	ENSMUSG00000096539.2	novel	639	8	NA	NA	7972	115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGAAACAGAGTTTGAAA	NA	False	NA	NA	False	AATAAA	-24	NA	30388984	30402169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_30389017_30390472_30390599_30390909_30390974_30399248_30399331_30401567_30401667_30401985
ES.36777.1	chrX	+	3659	1	FSM	ENSMUSG00000079297.5	ENSMUST00000112099.2	1350	1	-128	-2181	-128	2181	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAACCATAATAGCCA	NA	False	NA	NA	False	NA	NA	NA	32942995	32946654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_32943000_32946700
ES.36777.2	chrX	+	1617	1	FSM	ENSMUSG00000079297.5	ENSMUST00000112099.2	1350	1	-119	-148	-119	148	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAAATGTGACCTCTAC	NA	False	NA	NA	False	TATAAA	-20	NA	32943004	32944621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_32943000_32944600
ES.36778.1	chrX	+	4603	2	Intergenic	novelGene_30129	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	33289113	33293778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_33292192_33292253
ES.36779.1	chrX	-	5889	2	Intergenic	novelGene_30130	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	33916245	33910294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_33911820_33911881
ES.36779.2	chrX	-	6933	2	Intergenic	novelGene_30131	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	33917272	33910294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_33911733_33911777
ES.36779.3	chrX	-	4435	2	Intergenic	novelGene_30132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	33914790	33910295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_33911815_33911874
ES.3678.1	chr10	-	245	1	Intergenic	novelGene_2811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98996724	98996479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_98996500_98996700
ES.36780.1	chrX	-	609	6	NNC	ENSMUSG00000095899.2	novel	639	8	NA	NA	7950	117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACAGAGTTTGAAAGG	NA	False	NA	NA	False	AATAAA	-26	NA	34483353	34469972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_34470159_34470477_34470577_34473019_34473102_34481347_34481412_34481722_34481849_34483301
ES.36781.1	chrX	+	1976	4	Intergenic	novelGene_30133	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATGGTATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	34740860	34782969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_34741083_34757833_34758007_34781082_34781194_34781499
ES.36782.1	chrX	+	172	1	Intergenic	novelGene_30134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCTCCAATTT	NA	False	NA	NA	False	NA	NA	NA	35039342	35039514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35039300_35039500
ES.36783.1	chrX	-	4445	2	Antisense	novelGene_ENSMUSG00000082799.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAACAAAAAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	35087141	35074848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_35078318_35086165
ES.36783.2	chrX	-	3501	2	Antisense	novelGene_ENSMUSG00000082799.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATACCCACCATAAATAT	NA	False	NA	NA	False	NA	NA	NA	35086712	35075363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_35078318_35086165
ES.36783.3	chrX	-	959	1	Intergenic	novelGene_30135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCGTTTTGATGCGTT	NA	False	NA	NA	False	NA	NA	NA	35086925	35085966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35086000_35086900
ES.36784.1	chrX	-	186	1	Intergenic	novelGene_30136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35149179	35148993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35149000_35149200
ES.36785.1	chrX	+	7005	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-334	-6	-334	6	multi-exon	TRUE	canonical	1	53	junction_52	21.5813446724207	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAGGAAATAATTCTT	NA	False	NA	14	True	AATAAA	-26	NA	35152150	35340221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.10	chrX	+	7586	54	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-146	0	intron_retention	FALSE	canonical	0	0	junction_39	30.2260499824838	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152338	35340215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297549_35297807_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35332084_35333500_35333640_35339751
ES.36785.13	chrX	+	8940	53	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-138	-1	intron_retention	FALSE	canonical	1	53	junction_52	22.6606689477553	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCGAAGTGAAGGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	35152346	35340214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.14	chrX	+	6471	51	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-74	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_46	27.7452698671323	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTAATTCGAAGTGAA	NA	False	NA	1	True	AATAAA	-13	NA	35152410	35340208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.15	chrX	+	6755	53	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-68	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	30.8766394529153	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCGAAGTGAAGGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	35152416	35340214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227436_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333662_35339748
ES.36785.18	chrX	+	6758	54	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-43	4464	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_53	27.2974074118073	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGTAAATAACTACCGTAAA	NA	False	NA	NA	False	NA	NA	NA	35152441	35344679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751_35340237_35344650
ES.36785.2	chrX	+	6923	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-212	7	combination_of_known_junctions	FALSE	canonical	1	53	junction_53	22.4821593760484	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGGAAATAATTCTTT	NA	False	NA	15	True	AATAAA	-27	NA	35152272	35340222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.20	chrX	+	6704	53	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-40	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	26.2285415250743	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAACAAACTTATTTGTAA	NA	False	NA	-10	True	AATAAA	-2	NA	35152444	35340197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275267_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.21	chrX	+	4484	37	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-37	6170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	26.8431084104618	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCTTGTTAAATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	35152447	35286662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35286239
ES.36785.22	chrX	+	6544	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-36	157	-36	-151	multi-exon	FALSE	canonical	1	53	junction_52	21.5813446724207	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTGCTTGCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	35152448	35340058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.23	chrX	+	4365	30	ISM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-34	66172	-34	-6449	5prime_fragment	FALSE	canonical	3	103	junction_18	11.083940884948	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35152450	35274043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991
ES.36785.24	chrX	+	6673	53	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	27.5585109116701	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	10	True	AATAAA	-22	NA	35152451	35340217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301218_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.25	chrX	+	6677	53	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	27.3248591761071	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTGTAATTCGAAGTG	NA	False	NA	-1	True	AATAAA	-11	NA	35152454	35340206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210599_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.29	chrX	+	3789	14	ISM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	-20	96918	-20	-4195	5prime_fragment	FALSE	canonical	3	110	junction_11	8.87186897849588	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGGGGAAAGCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	35152464	35243297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139
ES.36785.32	chrX	+	5095	42	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-14	28431	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_27	31.5749017415431	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTTTTTTCTGCT	NA	False	NA	NA	False	AATAAA	-32	NA	35152470	35308923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270254_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293635_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518
ES.36785.35	chrX	+	6656	53	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.5511560233841	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152483	35340215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227060_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.36	chrX	+	4135	35	ISM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	1	56308	1	3415	5prime_fragment	FALSE	canonical	3	62	junction_30	16.4944417606823	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAATGTCTGAAAGAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	35152485	35283907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644
ES.36785.39	chrX	+	6145	49	FSM	ENSMUSG00000031093.15	ENSMUST00000115266.8	6047	49	-92	-6	-92	0	multi-exon	FALSE	canonical	1	53	junction_48	23.2696209770737	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35210957	35340215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.40	chrX	+	5309	23	ISM	ENSMUSG00000031093.15	ENSMUST00000115266.8	6047	49	30103	53544	2612	6173	internal_fragment	FALSE	canonical	3	67	junction_18	21.579614270559	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGTTAAATTCATTC	NA	False	NA	NA	False	AATAAA	-18	NA	35241152	35286665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644
ES.36785.41	chrX	+	3936	31	NIC	ENSMUSG00000031093.15	novel	6047	49	NA	NA	-17798	8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_26	35.7980291201749	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAAATAATTCTTTG	NA	False	NA	16	True	AATAAA	-28	NA	35257281	35340223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.42	chrX	+	5263	3	NIC	ENSMUSG00000031093.15	novel	6047	49	NA	NA	1049	6170	intron_retention	FALSE	canonical	3	119	junction_1	2.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCTTGTTAAATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	35276128	35286662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35277680_35279866_35280561_35283644
ES.36785.43	chrX	+	3100	23	NNC	ENSMUSG00000031093.15	novel	6047	49	NA	NA	2549	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	45.5219500228659	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCGAAGTGAAGGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	35277628	35340214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35290491_35290564_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.44	chrX	+	1981	12	NNC	ENSMUSG00000031093.15	novel	6047	49	NA	NA	3625	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	45.568040126735	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAATTCGAAGTGAAG	NA	False	NA	2	True	AATAAA	-14	NA	35308515	35340209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333639_35339751
ES.36785.45	chrX	+	1102	5	ISM	ENSMUSG00000031093.15	ENSMUST00000115266.8	6047	49	119471	0	25630	0	3prime_fragment	FALSE	canonical	1	53	junction_4	53.9768468882724	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAATTCGAAGTGAAG	NA	False	NA	2	True	AATAAA	-14	NA	35330520	35340209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.6	chrX	+	4857	36	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-160	3937	combination_of_known_junctions	FALSE	canonical	3	67	junction_31	18.2087666708503	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCACATTTATTTACAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	35152324	35284429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644
ES.36785.7	chrX	+	6896	54	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-159	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_53	26.4392207878828	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGGAAATAATTCTTTG	NA	False	NA	16	True	AATAAA	-28	NA	35152325	35340223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333662_35339748
ES.36785.8	chrX	+	6706	54	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-159	-151	combination_of_known_junctions	FALSE	canonical	1	53	junction_53	22.4821593760484	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTGCTTGCTTTGTA	NA	False	NA	NA	False	NA	NA	NA	35152325	35340058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ES.36785.9	chrX	+	7033	56	NNC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-149	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	37.8680789710632	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAAGTGAAGGAAATAAT	NA	False	NA	10	True	AATAAA	-22	NA	35152335	35340217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35287838_35287943_35290487_35290564_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333638_35339751
ES.36786.1	chrX	-	3443	1	Intergenic	novelGene_30137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-5	NA	35158335	35154892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35154900_35158300
ES.36787.1	chrX	-	159	1	Intergenic	novelGene_30138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	35171153	35170994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35171000_35171200
ES.36788.1	chrX	-	5455	1	Genic_Genomic	ENSMUSG00000118439.2	novel	NA	NA	NA	NA	-664	4352	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTATTGTGATTAT	NA	False	NA	NA	False	AATAAA	-12	NA	35289497	35284042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_35284000_35289500
ES.36789.1	chrX	+	3786	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	-71	-3	-71	3	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTTTTGGTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	35375691	35434915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ES.36789.2	chrX	+	3676	10	NIC	ENSMUSG00000017057.10	novel	3712	11	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	15.0882179526826	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTGGTC	NA	False	NA	NA	False	AATAAA	-24	NA	35375750	35434912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ES.36789.3	chrX	+	3765	12	NNC	ENSMUSG00000017057.10	novel	3712	11	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5441175988684	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAATGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	35375776	35434908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35375929_35387594_35387666_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ES.36789.4	chrX	+	3610	10	NIC	ENSMUSG00000017057.10	novel	3712	11	NA	NA	20	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.4112352794806	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTTTTGGTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	35375782	35434915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35432466
ES.36789.5	chrX	+	1866	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	20	1826	20	-1826	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCATTTTCCTCTGCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	35375782	35433086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ES.36789.6	chrX	+	3582	10	NIC	ENSMUSG00000017057.10	novel	3712	11	NA	NA	30	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	14.735528577867	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGCTTTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	35375792	35434909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35419195_35419281_35432466
ES.36789.7	chrX	+	4085	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	39	-412	39	412	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCTAATGGAAATGAAT	NA	False	NA	NA	False	AATAAA	-10	NA	35375801	35435324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ES.3679.1	chr10	+	287	2	Antisense	novelGene_ENSMUSG00000112805.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATACATATAT	NA	False	NA	NA	False	AATAAA	-16	NA	99051393	99053470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_99051450_99053239
ES.36790.1	chrX	+	176	1	Intergenic	novelGene_30139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATGTATGTATAT	NA	False	NA	NA	False	NA	NA	NA	35444639	35444815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35444600_35444800
ES.36791.1	chrX	-	241	1	Intergenic	novelGene_30140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTTATTTCTGCCTGC	NA	False	NA	NA	False	AATAAA	-39	NA	35469651	35469410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35469400_35469700
ES.36792.1	chrX	+	158	1	Intergenic	novelGene_30141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	35526872	35527030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35526900_35527000
ES.36793.1	chrX	+	158	1	Intergenic	novelGene_30142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	35561573	35561731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35561600_35561700
ES.36794.1	chrX	+	3208	11	FSM	ENSMUSG00000016239.12	ENSMUST00000016383.10	2911	11	-285	-12	-285	12	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGTTTTAATAATTT	NA	False	NA	NA	False	TATAAA	-27	NA	35591720	35626006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.10	chrX	+	3967	2	ISM	ENSMUSG00000016239.12	ENSMUST00000016383.10	2911	11	27382	1359	26519	-1359	intron_retention	FALSE	canonical	3	45	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCCTAGGGAGCATAGT	NA	False	NA	NA	False	NA	NA	NA	35619387	35624635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35619858_35621138
ES.36794.11	chrX	+	4735	1	NIC	ENSMUSG00000016239.12	novel	2911	11	NA	NA	26996	-1395	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35619864	35624599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35619900_35624600
ES.36794.2	chrX	+	4983	12	NNC	ENSMUSG00000016239.12	novel	2911	11	NA	NA	23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.3145157621845	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATGTTCATACTT	NA	False	NA	NA	False	TATAAA	-8	NA	35592028	35625987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35593053_35596168_35596288_35598864_35598988_35603172_35603329_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35617752_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.3	chrX	+	7544	12	Fusion	ENSMUSG00000016239.12_ENSMUSG00000119926.1	novel	2911	11	NA	NA	45	2861	multi-exon	FALSE	canonical	1	2	junction_3	15.6437614635123	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCAAAGTGTATTCTAT	NA	False	NA	14	True	ATTAAA	-23	NA	35592050	35630516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_35593053_35596168_35596288_35598864_35598988_35603172_35603329_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.4	chrX	+	7383	11	FSM	ENSMUSG00000016239.12_ENSMUSG00000119926.1	ENSMUST00000016383.10	2911	11	54	-4526	54	2865	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTGTATTCTATCTTG	NA	False	NA	18	True	ATTAAA	-27	NA	35592059	35630520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.5	chrX	+	3003	12	NIC	ENSMUSG00000016239.12	novel	2911	11	NA	NA	56	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	15.6437614635123	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAATGTTCATACT	NA	False	NA	NA	False	TATAAA	-7	NA	35592061	35625986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35593053_35596168_35596288_35598864_35598988_35603172_35603329_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.6	chrX	+	7224	10	Fusion	ENSMUSG00000016239.12_ENSMUSG00000119926.1	novel	2911	11	NA	NA	61	2853	multi-exon	FALSE	non_canonical	0	0	junction_4	17.6663172572016	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTGTCTACCAAAGTG	NA	False	NA	6	True	ATTAAA	-15	NA	35592066	35630508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35614667_35614765_35617525_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.7	chrX	+	2534	11	FSM	ENSMUSG00000016239.12	ENSMUST00000016383.10	2911	11	61	316	61	-316	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATAGATGTTGTTATTCT	NA	False	NA	NA	False	NA	NA	NA	35592066	35625678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36794.8	chrX	+	1130	6	NIC	ENSMUSG00000016239.12	novel	2911	11	NA	NA	12579	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	15.3022874107109	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATGTTCATACTT	NA	False	NA	NA	False	TATAAA	-8	NA	35605447	35625987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35625416
ES.36794.9	chrX	+	7468	6	ISM	ENSMUSG00000016239.12_ENSMUSG00000119926.1	ENSMUST00000016383.10	2911	11	20983	-4515	-14563	2854	3prime_fragment	FALSE	canonical	3	31	junction_2	6.7705243519243	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCTACCAAAGTGT	NA	False	NA	7	True	ATTAAA	-16	NA	35612988	35630509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ES.36795.1	chrX	-	3554	1	Intergenic	novelGene_30143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCGCATGTAGCCCAAGAT	NA	False	NA	NA	False	NA	NA	NA	35613386	35609832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35609800_35613400
ES.36796.1	chrX	+	197	2	Antisense	novelGene_ENSMUSG00000091556.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35716746	35786872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_35716809_35786737
ES.36797.1	chrX	-	6895	12	NNC	ENSMUSG00000091556.9	novel	5181	8	NA	NA	-22019	1220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.995859195463938	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTAGTCCATTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	35777502	35686033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_35687688_35689588_35689686_35692844_35692997_35693960_35697957_35700205_35700312_35702046_35702215_35734374_35734525_35743493_35743621_35747822_35747992_35755452_35755526_35773856_35774003_35777445
ES.36797.2	chrX	-	8103	2	NNC	ENSMUSG00000091556.9	novel	710	2	NA	NA	-4301	-957	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGGTATAATTTGTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	35697277	35688210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_35692997_35693960
ES.36798.1	chrX	-	179	1	Intergenic	novelGene_30144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35860324	35860145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_35860100_35860300
ES.36799.1	chrX	+	2200	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	-340	-3	-340	3	multi-exon	FALSE	canonical	3	454	junction_1	42	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGCTTTCATTTTTTA	1328	False	NA	NA	False	AATAAA	-18	NA	35861518	35869735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35862268_35865773_35865930_35868440
ES.36799.2	chrX	+	830	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	3	1024	3	-1024	multi-exon	FALSE	canonical	3	454	junction_1	42	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGATGTGTTTGTAT	1671	False	NA	NA	False	GATAAA	-16	NA	35861861	35868708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_35862268_35865773_35865930_35868440
ES.36799.3	chrX	+	1470	4	NNC	ENSMUSG00000006373.11	novel	1857	3	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	236.31805310264	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATATAGTGAGGCTTTC	1671	False	NA	NA	False	AATAAA	-10	NA	35861861	35869727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_35862268_35865773_35865930_35868440_35869208_35869586
ES.36799.5	chrX	+	5114	1	NIC	ENSMUSG00000006373.11	novel	1857	3	NA	NA	2758	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTGAGGCTTTCATT	4426	False	NA	NA	False	AATAAA	-13	NA	35864616	35869730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_35864600_35869700
ES.36799.6	chrX	+	1447	2	ISM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	3914	2	3914	-2	3prime_fragment	FALSE	canonical	3	538	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTGAGGCTTTCATT	5582	False	NA	NA	False	AATAAA	-13	NA	35865772	35869730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_35865930_35868440
ES.368.1	chr1	-	3980	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	-23	-797	1	797	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGCTATTTTTATCAA	NA	False	NA	NA	False	TTTAAA	-5	NA	40829846	40810400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
ES.368.3	chr1	-	4072	7	FSM	ENSMUSG00000041945.13	ENSMUST00000131390.8	3311	7	32	-793	2	790	multi-exon	FALSE	canonical	0	0	junction_5	5.1234753829798	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGAATATGGCTATTT	NA	False	NA	NA	False	NA	NA	NA	40829815	40810407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829430_40829561_40829644
ES.368.4	chr1	-	3178	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	-14	-4	10	4	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTCGTGTTCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	40829837	40811193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
ES.368.5	chr1	-	3289	7	FSM	ENSMUSG00000041945.13	ENSMUST00000131390.8	3311	7	21	1	-3	-1	multi-exon	FALSE	canonical	0	0	junction_5	5.1234753829798	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACGTGTGTGTGTGTGTC	NA	False	NA	NA	False	ATTAAA	-10	NA	40829826	40811201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829430_40829561_40829644
ES.368.6	chr1	-	1190	1	ISM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	17221	215	17215	-212	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCTGGTGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	40812602	40811412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_40811400_40812600
ES.3680.1	chr10	+	2758	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	34	4	34	-4	multi-exon	TRUE	canonical	2	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCGTGTTTTTATTTT	NA	False	NA	5	True	AATAAA	-15	NA	99099126	99103346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_99099954_99100405_99100844_99101853
ES.36800.1	chrX	-	6191	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	-32	-156	-32	156	multi-exon	FALSE	canonical	3	11	junction_4	20.573040611441	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCGGGGTAGATGAATG	NA	False	NA	NA	False	AATAAA	-39	NA	35909080	35871810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ES.36800.11	chrX	-	3493	1	NIC	ENSMUSG00000059708.13	novel	6003	7	NA	NA	20499	-9226	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGATAGGCAGAGGGAAT	NA	False	NA	NA	False	AAAACA	-26	NA	35888250	35884757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_35884800_35888200
ES.36800.2	chrX	-	5442	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-372	-3700	-73	135	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGACTATTGACTGATCA	NA	False	NA	NA	False	AATAAA	-18	NA	35909121	35871831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
ES.36800.3	chrX	-	5274	5	NIC	ENSMUSG00000059708.13	novel	1370	6	NA	NA	-7	135	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	23.710493457539	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGACTATTGACTGATCA	NA	False	NA	NA	False	AATAAA	-18	NA	35909055	35871831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35908702
ES.36800.4	chrX	-	6146	7	NNC	ENSMUSG00000059708.13	novel	6003	7	NA	NA	-14	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.374965790891	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGACTATTGACTGATCA	NA	False	NA	NA	False	AATAAA	-18	NA	35909062	35871831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_35876318_35877907_35877977_35878338_35878568_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ES.36800.5	chrX	-	5266	5	NIC	ENSMUSG00000059708.13	novel	1370	6	NA	NA	31	132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.8480768249708	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTGACTATTGACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	35909017	35871834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_35876318_35878338_35878574_35882255_35882387_35900125_35900228_35908702
ES.36800.6	chrX	-	6107	7	NNC	ENSMUSG00000059708.13	novel	6003	7	NA	NA	7	132	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	22.1541317942174	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTGACTATTGACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	35909041	35871834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_35876318_35877907_35877977_35878359_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ES.36800.7	chrX	-	5268	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-328	-3570	-29	5	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATGTCTCTATCTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	35909077	35871961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
ES.36800.8	chrX	-	5294	7	NNC	ENSMUSG00000059708.13	novel	6003	7	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9284030140833	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGATGTCTCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	35909017	35871966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_35876318_35876912_35876997_35877907_35877977_35878338_35878574_35882255_35882387_35900118_35900228_35908702
ES.36800.9	chrX	-	5973	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	30	0	30	0	multi-exon	FALSE	canonical	3	11	junction_4	20.573040611441	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGATGTCTCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	35909018	35871966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ES.36801.1	chrX	+	283	1	Intergenic	novelGene_30145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	35935377	35935660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35935400_35935700
ES.36802.1	chrX	+	181	1	Intergenic	novelGene_30146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTATTTAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35943640	35943821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35943600_35943800
ES.36803.1	chrX	+	260	1	Intergenic	novelGene_30147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGATTAGGTTTCT	NA	False	NA	NA	False	TTTAAA	-21	NA	35983860	35984120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_35983900_35984100
ES.36804.1	chrX	+	2735	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-48	-1576	-48	1576	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAATTTACATATATTT	NA	False	NA	NA	False	AATAAA	-11	NA	36007263	36042431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
ES.36804.2	chrX	+	2319	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-42	-1166	-42	1166	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTATTCTCACAAGATGT	NA	False	NA	NA	False	AATAAA	-16	NA	36007269	36042021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
ES.36804.3	chrX	+	2778	3	ISM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	-36	17295	-36	-16378	5prime_fragment	FALSE	canonical	3	15	junction_1	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCCACCTCCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36007275	36023560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36007672_36015785_36016028_36021420
ES.36804.4	chrX	+	1975	4	NNC	ENSMUSG00000037636.7	novel	1111	5	NA	NA	4	-11061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCATGCTTTGTAAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	36007315	36028877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36007672_36015785_36016028_36021420_36021594_36027673
ES.36804.5	chrX	+	1109	4	NNC	ENSMUSG00000037636.7	novel	1111	5	NA	NA	5	-17895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGAGGCCTAAGAAAGA	NA	False	NA	NA	False	AATAAA	-14	NA	36007316	36022043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36007672_36015785_36016028_36021420_36021594_36021704
ES.36804.6	chrX	+	5526	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	38	-4453	-14	4453	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTCATGGTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	36007349	36045308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
ES.36804.7	chrX	+	1310	5	NNC	ENSMUSG00000037636.7	novel	1111	5	NA	NA	1	-16378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.24662100445346	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCCACCTCCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	36007364	36023560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36007672_36015785_36016028_36021420_36021594_36022467_36022653_36023157
ES.36804.8	chrX	+	1504	4	NNC	ENSMUSG00000037636.7	novel	1111	5	NA	NA	255	-17198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGTATGCTTGGTCA	NA	False	NA	NA	False	ATTAAA	-24	NA	36007618	36022740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36007672_36015785_36016028_36021420_36021594_36021704
ES.36804.9	chrX	+	159	1	Intergenic	novelGene_30151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	36041081	36041240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36041100_36041200
ES.36805.1	chrX	-	175	1	Intergenic	novelGene_30148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAAAGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	36029246	36029071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36029100_36029200
ES.36806.1	chrX	-	207	1	Intergenic	novelGene_30149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGTTGATAAAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	36030582	36030375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36030400_36030600
ES.36807.1	chrX	-	1452	1	Intergenic	novelGene_30150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGCCATCTAGGAATA	NA	False	NA	NA	False	NA	NA	NA	36032463	36031011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36031000_36032500
ES.36808.1	chrX	+	1189	5	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	-801	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5140.90018260421	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCGTTGTTTGTTTCCA	NA	False	NA	32	True	AATAAA	-34	NA	36058502	36062463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36058536_36059390_36059495_36060495_36060983_36061388_36061530_36062039
ES.36808.10	chrX	+	1193	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	1	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5382.46789741162	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAGAAATA	NA	False	NA	-7	True	NA	NA	NA	36059304	36062424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36059499_36060509_36060983_36061388_36061530_36062039
ES.36808.11	chrX	+	1234	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5382.46789741162	1959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCGTTGTTTGTTTC	NA	False	NA	30	True	AATAAA	-32	NA	36059304	36062461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36059495_36060501_36060983_36061388_36061530_36062039
ES.36808.13	chrX	+	1187	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	2	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5605.09585605416	1959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAGAAATA	NA	False	NA	-7	True	NA	NA	NA	36059308	36062424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36059495_36060495_36060983_36061400_36061530_36062039
ES.36808.15	chrX	+	486	2	FSM	ENSMUSG00000016319.4	ENSMUST00000126608.2	989	2	2	501	2	-501	multi-exon	FALSE	canonical	3	12606	junction_1	0	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCCGTCTAGCAGCTGA	NA	False	NA	NA	False	GGGGCT	-37	NA	36059308	36060795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36059495_36060495
ES.36808.2	chrX	+	1309	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	-64	-5	-64	5	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTTGTTTGTTTCCATA	NA	False	NA	34	True	AATAAA	-36	NA	36059239	36062465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ES.36808.3	chrX	+	1068	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	-20	192	-20	62	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGGGCTTGTCTGTT	NA	False	NA	16	True	AATATA	-25	NA	36059283	36062268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ES.36808.5	chrX	+	1622	3	NIC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	-1	-25	intron_retention	FALSE	canonical	3	11014	junction_2	796	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAATAAAAATACCCAA	NA	False	NA	4	True	AATAAA	-6	NA	36059302	36062435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36059495_36060495_36061530_36062039
ES.36808.6	chrX	+	1234	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	0	-36	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	5756.94110521281	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAGAAATA	NA	False	NA	-7	True	NA	NA	NA	36059303	36062424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36059495_36060495_36060983_36061388_36061530_36062009
ES.36808.7	chrX	+	1276	4	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5758.35290879451	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCAGTTTTGTTCGTTG	NA	False	NA	22	True	AATAAA	-24	NA	36059303	36062453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36059495_36060495_36060983_36061388_36061573_36062039
ES.36808.8	chrX	+	1749	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	1	0	-1	intron_retention	FALSE	canonical	3	11783	junction_2	411.5	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTCGTTGTTTGTT	NA	False	NA	28	True	AATAAA	-30	NA	36059303	36062459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36059495_36060495_36060983_36061388
ES.36809.1	chrX	+	178	1	Intergenic	novelGene_30153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	36086588	36086766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36086600_36086800
ES.3681.1	chr10	-	1361	2	FSM	ENSMUSG00000112082.2	ENSMUST00000218838.2	628	2	-2	-731	-2	731	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCACAGTGCTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	99296094	99287784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_99289098_99296046
ES.36810.1	chrX	+	9557	2	Antisense	novelGene_ENSMUSG00000006423.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCAAGAACATAGCTCT	3200	False	NA	NA	False	NA	NA	NA	36115343	36125498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_36116387_36116984
ES.36811.1	chrX	-	1073	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	16	41099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5417368800871	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCCGGCTCTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	36127875	36046290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36046668_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.10	chrX	-	5743	6	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	19	0	intron_retention	FALSE	canonical	3	146	junction_1	37.322379345374	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127872	36112195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36120547_36127276_36127395_36127661
ES.36811.11	chrX	-	3109	1	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	5356	2	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTAGCTTGTTTTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	36115309	36112200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36112200_36115300
ES.36811.12	chrX	-	3129	6	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	92.4675078067966	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAAACTAGCTTGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	36127835	36112203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36120504_36120547_36127276_36127395_36127661
ES.36811.14	chrX	-	3195	6	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	91.2697102000439	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATGAACTAAACTAGCT	NA	False	NA	NA	False	AATAAA	-14	NA	36127810	36112209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36127276_36127395_36127661
ES.36811.15	chrX	-	3169	6	NIC	ENSMUSG00000006423.16	novel	579	6	NA	NA	19	-33	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	93.200858365146	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAATAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	36127872	36112235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36120469_36120547_36127276_36127395_36127661
ES.36811.16	chrX	-	3203	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	30	107	22	-100	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTGTTGGGGGTGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	36127869	36112302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.17	chrX	-	5918	3	ISM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	7603	109	369	-102	intron_retention	FALSE	canonical	3	146	junction_1	35.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTTTTGTTGGGGGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	36120296	36112304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36114816_36116291_36116385_36116982
ES.36811.18	chrX	-	3060	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	37	243	29	-236	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCATAAGTCTGCAAG	NA	False	NA	NA	False	AATAAA	-22	NA	36127862	36112438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.19	chrX	-	2799	6	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	60	-244	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	92.4675078067966	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGGGAAAGTCATAAG	NA	False	NA	NA	False	AATAAA	-14	NA	36127748	36112446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36120504_36120547_36127276_36127395_36127661
ES.36811.2	chrX	-	164	1	Intergenic	novelGene_30152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAGATAGAT	NA	False	NA	NA	False	NA	NA	NA	36063771	36063607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36063600_36063800
ES.36811.20	chrX	-	2690	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	90	560	-1	-553	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTGAATTGCAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	36127809	36112755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.21	chrX	-	1033	1	ISM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	13590	1081	6356	-1074	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTCCAGGCAATGAC	NA	False	NA	NA	False	ATTAAA	-21	NA	36114309	36113276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36113300_36114300
ES.36811.3	chrX	-	1255	7	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	22	8971	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	75.5389891968968	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGCTGTTTTTGCTTCG	NA	False	NA	NA	False	NA	NA	NA	36127869	36078418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.4	chrX	-	3674	6	NIC	ENSMUSG00000006423.16	novel	678	3	NA	NA	27	8965	intron_retention	FALSE	canonical	3	30	junction_1	82.368926179719	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGTAAGAGCTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	36127864	36078424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36078984_36116291_36116385_36116982_36117073_36117935_36120547_36127276_36127395_36127661
ES.36811.5	chrX	-	2189	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	20	-3002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5417368800871	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAATCACAAATTGAGTT	NA	False	NA	NA	False	NA	NA	NA	36127871	36090391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36091889_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.6	chrX	-	4365	5	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	-2415	-3039	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	91.7534059313331	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36123080	36090428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36091896_36116291_36116385_36116982_36117073_36117935_36118075_36120504
ES.36811.7	chrX	-	1559	7	NNC	ENSMUSG00000006423.16	novel	678	3	NA	NA	19	-3640	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	84.3374504923854	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGCGTTTTACAGCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	36127872	36091029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36091896_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.8	chrX	-	3316	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	26	-2	18	2	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTTTGATCATTTTA	NA	False	NA	NA	False	AATAAA	-30	NA	36127873	36112193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ES.36811.9	chrX	-	6569	5	NIC	ENSMUSG00000006423.16	novel	3340	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	146	junction_1	41.4751431582822	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127835	36112195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36114816_36116291_36116385_36116982_36120547_36127276_36127395_36127661
ES.36812.1	chrX	+	768	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	17	947	17	20	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTCTTCCCCTTTCT	NA	False	NA	48	True	ATTAAA	-40	NA	36137964	36146928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ES.36812.2	chrX	+	969	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	17	746	17	-65	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGATGTTATTTGTAA	NA	False	NA	NA	False	GATAAA	-20	NA	36137964	36147129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ES.36812.5	chrX	+	1699	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	36	-3	0	3	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCACACTTTTATTAACT	NA	False	NA	10	True	AATAAA	-19	NA	36137983	36147878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ES.36812.6	chrX	+	888	5	FSM	ENSMUSG00000016308.13	ENSMUST00000202812.2	719	5	-322	153	0	-17	multi-exon	FALSE	canonical	3	845	junction_1	46.1702014290603	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAATAGCTGTTGT	NA	False	NA	6	True	NA	NA	NA	36137983	36146886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ES.36812.7	chrX	+	671	6	FSM	ENSMUSG00000016308.13	ENSMUST00000202991.4	715	6	27	17	0	-17	multi-exon	FALSE	canonical	1	6	junction_4	341.941749425249	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAATAGCTGTTGT	NA	False	NA	6	True	NA	NA	NA	36138010	36146886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146260_36146341_36146664
ES.36812.8	chrX	+	2550	1	NIC	ENSMUSG00000016308.13	novel	1732	6	NA	NA	248	2083	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACAGGACTGAGTGATT	NA	False	NA	NA	False	AAAAAG	-4	NA	36138553	36141103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36138600_36141100
ES.36812.9	chrX	+	3098	3	FSM	ENSMUSG00000016308.13	ENSMUST00000201050.2	603	3	-2494	-1	-2494	1	multi-exon	FALSE	canonical	3	893	junction_2	36.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGTCTTCCCTTGGCA	NA	False	NA	29	True	ATTAAA	-21	NA	36142635	36146909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36145400_36146251_36146341_36146664
ES.36813.1	chrX	-	1102	2	Antisense	novelGene_ENSMUSG00000016308.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTGACAAATAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	36144533	36141204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_36142153_36144379
ES.36813.2	chrX	-	3323	1	Intergenic	novelGene_30154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCTGACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	36144533	36141210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36141200_36144500
ES.36814.1	chrX	-	6214	1	Genic_Genomic	ENSMUSG00000044149.8	novel	NA	NA	NA	NA	12469	3323	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTTTTTTATTTACAA	NA	False	NA	NA	False	AATAAA	-20	NA	36154083	36147869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_36147900_36154100
ES.36814.2	chrX	-	5383	3	FSM	ENSMUSG00000044149.8	ENSMUST00000239259.2	3882	3	47	-1548	47	1548	multi-exon	FALSE	canonical	3	10	junction_2	0.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGCACTTCCAAGTTT	NA	False	NA	NA	False	NA	NA	NA	36167119	36149644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36154166_36155277_36155409_36166388
ES.36814.3	chrX	-	4951	3	FSM	ENSMUSG00000044149.8	ENSMUST00000239259.2	3882	3	36	-1105	36	1105	multi-exon	FALSE	canonical	3	10	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGTGATAAATTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	36167130	36150087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36154166_36155277_36155409_36166388
ES.36814.5	chrX	-	3502	4	NNC	ENSMUSG00000044149.8	novel	3882	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.96655480858378	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGCTGTAATTATTTCT	NA	False	NA	NA	False	AATAAA	-23	NA	36167160	36151192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36154166_36155277_36155409_36166388_36166451_36166824
ES.36814.9	chrX	-	3728	4	NNC	ENSMUSG00000044149.8	novel	3882	3	NA	NA	46	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.71404520791032	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAAAATTAGTGCTGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	36167120	36151200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36154161_36155273_36155409_36166388_36166726_36166824
ES.36815.1	chrX	-	2232	9	NNC	ENSMUSG00000050379.16	novel	3457	10	NA	NA	14315	-919	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	20.6242424103287	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTCCATGATCTGCTC	NA	False	NA	NA	False	AATAAA	-17	NA	36238829	36175897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715
ES.36815.2	chrX	-	2362	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	168	927	3	-927	multi-exon	FALSE	canonical	3	7	junction_1	15.297865581774	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCAGTGGCTCCATG	NA	False	NA	NA	False	AATAAA	-9	NA	36253141	36175905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.3	chrX	-	4494	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-28	3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTTCTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	36253172	36177095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.4	chrX	-	4487	11	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	21.2388794431345	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTTCTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	36253147	36177095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.5	chrX	-	3291	10	NNC	ENSMUSG00000050379.16	novel	1845	10	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	19.9610732287732	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTGTGTGGTGTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	36253197	36177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.6	chrX	-	3299	10	FSM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	131	-1585	-34	0	multi-exon	FALSE	canonical	3	5	junction_1	15.8869462681912	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTGTGTGGTGTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	36253178	36177098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.7	chrX	-	4438	10	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	16.9538225414044	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGTGTGTGTGGTGTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	36253147	36177099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.8	chrX	-	2327	11	FSM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	-41	2387	-41	-802	multi-exon	FALSE	canonical	2	7	junction_2	18.537529500988	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGAGTCTTGATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	36253350	36179485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36815.9	chrX	-	2113	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	-37	-802	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGAGTCTTGATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	36253181	36179485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ES.36816.1	chrX	+	178	1	Intergenic	novelGene_30155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAC	2144	False	NA	NA	False	NA	NA	NA	36330574	36330752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36330600_36330800
ES.36817.1	chrX	-	187	1	Intergenic	novelGene_30156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATTTATCTATATAC	NA	False	NA	NA	False	NA	NA	NA	36338116	36337929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36337900_36338100
ES.36818.1	chrX	+	284	1	Intergenic	novelGene_30157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCCTTAAA	2632	False	NA	NA	False	NA	NA	NA	36339339	36339623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36339300_36339600
ES.36818.2	chrX	+	175	1	Intergenic	novelGene_30158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGCGGGATT	2633	False	NA	NA	False	NA	NA	NA	36339340	36339515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36339300_36339500
ES.36819.1	chrX	+	207	1	Intergenic	novelGene_30159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAGAATCTATGTAGC	7516	False	NA	NA	False	NA	NA	NA	36344223	36344430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36344200_36344400
ES.3682.1	chr10	-	170	1	Intergenic	novelGene_2812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAAGCTGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	99299682	99299512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_99299500_99299700
ES.36820.1	chrX	+	1301	1	Intergenic	novelGene_30160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTATGCAAAAGTGGGG	7870	False	NA	NA	False	AAAACA	-5	NA	36344577	36345878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36344600_36345900
ES.36821.1	chrX	-	682	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	-70	0	-70	0	multi-exon	FALSE	canonical	3	12849	junction_1	35	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	False	NA	-5	True	TATAAA	-17	NA	36349125	36346172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36346403_36347637_36347742_36348777
ES.36821.2	chrX	-	1388	2	ISM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	221	39	-15	-39	intron_retention	FALSE	canonical	3	12849	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTTCTGGTTTAT	NA	False	NA	-9	True	AATAAA	-15	NA	36348834	36346211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36346403_36347637
ES.36821.3	chrX	-	2591	1	FSM	ENSMUSG00000065642.3	ENSMUST00000083708.3	131	1	-2107	-353	-2107	353	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTTCTGGTTTAT	NA	False	NA	-9	True	AATAAA	-15	NA	36348802	36346211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36346200_36348800
ES.36822.1	chrX	+	2959	1	Intergenic	novelGene_30161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36368568	36371527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36368600_36371500
ES.36823.1	chrX	-	5751	2	ISM	ENSMUSG00000036572.17	ENSMUST00000130324.2	780	7	6060	-3998	6060	0	3prime_fragment	FALSE	canonical	3	310	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36362116	36355330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36359476_36360510
ES.36823.10	chrX	-	1659	12	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.0383481798478	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373997	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36355463_36356206_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.11	chrX	-	2280	10	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	92.9049693683461	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373973	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36372567_36372675_36372800_36372908_36373728
ES.36823.12	chrX	-	6420	5	NNC	ENSMUSG00000036572.17	novel	780	7	NA	NA	2455	-2	intron_retention	FALSE	canonical	2	4	junction_2	111.243820053071	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36365721	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36359476_36360510_36360672_36361312_36363343_36363745_36363790_36365679
ES.36823.13	chrX	-	5956	2	NNC	ENSMUSG00000036572.17	novel	780	7	NA	NA	1897	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36372078	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36361159_36371948
ES.36823.14	chrX	-	2402	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	-60	2	-60	-2	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36374035	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.15	chrX	-	2135	9	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.871741352998	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373950	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359257_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36372567_36372675_36372800_36372908_36373728
ES.36823.17	chrX	-	2422	12	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	297	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	112.919118278205	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGCGTTTATTTATT	NA	False	NA	-5	True	AATAAA	-20	NA	36373678	36355334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36371006_36371257_36372567_36372675_36372800_36372908_36373638
ES.36823.18	chrX	-	5488	11	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	15	-4	intron_retention	FALSE	canonical	0	0	junction_6	104.694985553273	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGCGTTTATTTATT	NA	False	NA	-5	True	AATAAA	-20	NA	36373960	36355334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36366163_36366428_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.19	chrX	-	4422	10	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	4	-4	intron_retention	FALSE	canonical	3	159	junction_3	47.7609789588856	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGCGTTTATTTATT	NA	False	NA	-5	True	AATAAA	-20	NA	36373971	36355334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36356315_36359174_36359476_36360510_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.2	chrX	-	6737	9	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	14	0	intron_retention	FALSE	non_canonical	0	0	junction_1	103.532528101076	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373961	36355330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36355463_36356206_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.20	chrX	-	2344	10	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.662502662478	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGCGTTTATTTATT	NA	False	NA	-5	True	AATAAA	-20	NA	36373951	36355334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359500_36360510_36360672_36363159_36363343_36363741_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.21	chrX	-	4635	10	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	27	-11	intron_retention	FALSE	non_canonical	0	0	junction_2	120.443419429833	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTTTGAAGCTGCGTTT	NA	False	NA	-12	True	AATAAA	-13	NA	36373948	36355341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359476_36360512_36360672_36361321_36361362_36363159_36363343_36363745_36363790_36365679_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.22	chrX	-	1511	4	ISM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	10209	2999	4410	999	internal_fragment	FALSE	canonical	3	68	junction_2	98.8140790688362	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATATATTCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	36363766	36358329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36359476_36360510_36360672_36363159_36363343_36363745
ES.36823.23	chrX	-	1902	3	NNC	ENSMUSG00000036572.17	novel	780	7	NA	NA	6269	999	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	153	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATATATTCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	36361907	36358329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36359476_36360510_36360672_36361312
ES.36823.24	chrX	-	2241	10	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	3	999	combination_of_known_junctions	FALSE	canonical	3	132	junction_2	56.9368287590361	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATATATTCTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	36373972	36358329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.25	chrX	-	4849	7	NIC	ENSMUSG00000036572.17	novel	2553	8	NA	NA	9	14	intron_retention	FALSE	canonical	3	159	junction_1	46.950328362359	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAACAAAAAATACACTGAT	NA	False	NA	NA	False	NA	NA	NA	36373966	36361088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36362758_36363159_36363343_36363745_36363790_36365679_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.26	chrX	-	2559	8	FSM	ENSMUSG00000036572.17	ENSMUST00000133481.2	2553	8	4	-10	4	10	multi-exon	FALSE	canonical	3	159	junction_1	43.5576090496534	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGTAACAAAAAATACAC	NA	False	NA	NA	False	NA	NA	NA	36373971	36361092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.3	chrX	-	4894	11	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	85.4145772102163	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373973	36355330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36356661_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.4	chrX	-	4690	11	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_6	106.643518321556	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373971	36355330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359476_36360510_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36366163_36366428_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.5	chrX	-	2459	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	-78	-2	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36374053	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36823.6	chrX	-	4815	9	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	17	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	109.749074597465	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373958	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359476_36360509_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372909_36373728
ES.36823.7	chrX	-	2544	5	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	5845	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	133.375410027486	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36362331	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36358793_36358875_36359174_36359476_36360510_36360672_36361312
ES.36823.8	chrX	-	2220	11	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	251	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	87.4914852999993	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373724	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373638
ES.36823.9	chrX	-	2280	11	NNC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.5817532740011	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	False	NA	-3	True	AATAAA	-22	NA	36373957	36355332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36356315_36359257_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ES.36824.1	chrX	-	177	2	Intergenic	novelGene_30162	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAGGATGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36385161	36378502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36378533_36385014
ES.36824.2	chrX	-	159	1	Intergenic	novelGene_30163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAGGATGAAGA	NA	False	NA	NA	False	NA	NA	NA	36378663	36378504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36378500_36378700
ES.36825.1	chrX	+	4274	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-42	-2	-42	2	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAATGTGTGGATTGT	NA	False	NA	26	True	AATAAA	-26	NA	36390405	36414401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.10	chrX	+	3879	2	ISM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-5	16476	-5	-7599	5prime_fragment	FALSE	canonical	3	431	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCTATATCTAATACTC	NA	False	NA	NA	False	NA	NA	NA	36390442	36397923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36391029_36394630
ES.36825.11	chrX	+	4147	10	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	133.605370632054	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTTCATATTTTTAAT	NA	False	NA	15	True	AATAAA	-15	NA	36390450	36414390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443_36413155_36413225
ES.36825.12	chrX	+	3948	7	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	149.143946128117	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTTTCATATTTTTAA	NA	False	NA	14	True	AATAAA	-14	NA	36390452	36414389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403388_36406632_36406708_36411443
ES.36825.14	chrX	+	4210	9	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	16	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	141.687100242047	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGTTTCATATTTTTAA	NA	False	NA	14	True	AATAAA	-14	NA	36390463	36414389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403323_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.17	chrX	+	4097	9	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	52	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	141.601498491365	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAAACACAGT	NA	False	NA	-14	True	AAAACA	-23	NA	36390499	36414322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406701_36411440
ES.36825.18	chrX	+	4159	9	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	75	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	141.68401241848	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTCATATTTTTAATG	NA	False	NA	16	True	AATAAA	-16	NA	36390522	36414391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400392_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.19	chrX	+	4003	10	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	87	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	133.605370632054	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAAACACAGT	NA	False	NA	-14	True	AAAACA	-23	NA	36390534	36414322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443_36412936_36412998
ES.36825.2	chrX	+	1775	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	2462	-7	-2462	multi-exon	FALSE	canonical	3	360	junction_3	33.4381425171914	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTTAAGTTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	36390440	36411937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.3	chrX	+	3107	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	1130	-7	-1130	multi-exon	FALSE	canonical	3	360	junction_3	33.4381425171914	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTGTAGTGTATAAGT	NA	False	NA	NA	False	NA	NA	NA	36390440	36413269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.4	chrX	+	3677	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	560	-7	-560	multi-exon	FALSE	canonical	3	360	junction_3	33.4381425171914	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATTGTTACAAGTGTT	NA	False	NA	NA	False	AATAGA	-21	NA	36390440	36413839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.5	chrX	+	2875	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	-7	1362	-7	-1362	multi-exon	FALSE	canonical	3	360	junction_3	33.4381425171914	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATACGTCTCAGTCTGA	NA	False	NA	NA	False	AGTAAA	-36	NA	36390440	36413037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.6	chrX	+	4216	9	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	139.273112983088	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGTTTCATATTTTTA	NA	False	NA	13	True	AATAAA	-13	NA	36390441	36414388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405299_36405401_36405489_36405566_36406557_36406708_36411443
ES.36825.7	chrX	+	4151	9	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	-6	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	181.970292905188	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAAACACAGT	NA	False	NA	-14	True	AAAACA	-23	NA	36390441	36414322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403395_36405290_36405401_36405489_36405566_36406557_36406712_36411456
ES.36825.9	chrX	+	4382	10	NNC	ENSMUSG00000016409.5	novel	4230	9	NA	NA	-6	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	173.943441921949	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATGTTTCATATTTTT	NA	False	NA	12	True	AATAAA	-12	NA	36390441	36414387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36391029_36394630_36394712_36394837_36394996_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ES.36826.1	chrX	-	176	1	Intergenic	novelGene_30164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTTACTACGAA	NA	False	NA	NA	False	NA	NA	NA	36393098	36392922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_36392900_36393100
ES.36827.1	chrX	+	5291	1	Antisense	novelGene_ENSMUSG00000036551.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTCAAGAATTTAC	NA	False	NA	NA	False	NA	NA	NA	36422491	36427782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_36422500_36427800
ES.36828.1	chrX	+	177	1	Intergenic	novelGene_30165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATAGGCTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	36436544	36436721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36436500_36436700
ES.36829.1	chrX	+	171	1	Intergenic	novelGene_30166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36443650	36443821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36443600_36443800
ES.3683.1	chr10	+	182	1	Intergenic	novelGene_2813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCCATTTGATTA	3663	False	NA	NA	False	NA	NA	NA	99310277	99310459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_99310300_99310500
ES.36830.1	chrX	+	1241	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	-22	4	-22	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTTTCTTTCTTTCT	NA	False	NA	17	True	AATAAA	-17	NA	36454875	36456116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36454900_36456100
ES.36831.1	chrX	-	588	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	-172	3	-172	-3	multi-exon	FALSE	canonical	3	2951	junction_1	110	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCATTTTTATTTTTAT	2140	False	NA	-4	True	AATAAA	-17	NA	36454988	36451243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36451395_36453526_36453617_36454641
ES.36831.2	chrX	-	2179	1	NIC	ENSMUSG00000016427.8	novel	419	3	NA	NA	1385	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCTAAAGTCATTTT	3697	False	NA	-13	True	AATAAA	-8	NA	36453431	36451252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36451300_36453400
ES.36832.1	chrX	-	1440	4	NNC	ENSMUSG00000073243.3	novel	817	4	NA	NA	38	847	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	31.8433666561813	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGAGGTCCCCAGATT	NA	False	NA	NA	False	NA	NA	NA	36474656	36472153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36473184_36473576_36473674_36473912_36474040_36474470
ES.36832.2	chrX	-	1643	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	19	-845	19	845	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCTGAGGTCCCCAGA	NA	False	NA	NA	False	NA	NA	NA	36474675	36472155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
ES.36832.3	chrX	-	1150	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	52	-385	52	385	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTTGTCCTCTGACC	NA	False	NA	NA	False	NA	NA	NA	36474642	36472615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
ES.36832.4	chrX	-	892	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	19	-94	19	94	multi-exon	FALSE	canonical	3	60	junction_3	3.74165738677394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGATATCTCAAAAGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	36474675	36472906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
ES.36833.1	chrX	+	160	1	Intergenic	novelGene_30167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATGAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	36475434	36475594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_36475400_36475600
ES.36834.1	chrX	-	725	3	NIC	ENSMUSG00000071773.5	novel	883	5	NA	NA	3984	22	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	50.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTGTCTTCTGTAAA	NA	False	NA	-1	True	AATAAA	-23	NA	36481927	36477434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36477701_36481305_36481649_36481811
ES.36834.2	chrX	-	824	4	ISM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	3923	-14	3923	14	3prime_fragment	FALSE	canonical	3	106	junction_3	6.34209919681348	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTATTCATGTGTCT	NA	False	NA	-9	True	AATAAA	-15	NA	36481988	36477442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811
ES.36835.1	chrX	+	805	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	-8	-2	-8	2	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36508620	36513341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
ES.36835.2	chrX	+	957	3	NIC	ENSMUSG00000051827.12	novel	795	4	NA	NA	2	2	intron_retention	FALSE	canonical	3	47	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36508630	36513341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36509314_36510828_36510875_36513113
ES.36836.1	chrX	+	805	4	FSM	ENSMUSG00000079638.9	ENSMUST00000115191.7	799	4	-7	1	-7	-1	multi-exon	FALSE	canonical	3	16	junction_3	23.6126143312331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36593712	36598458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36593831_36593992_36594405_36595944_36595991_36598229
ES.36836.2	chrX	+	721	4	NNC	ENSMUSG00000079638.9	novel	799	4	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	29.4392028877595	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36593713	36598458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36593831_36593992_36594405_36595944_36595991_36598312
ES.36836.3	chrX	+	940	3	NIC	ENSMUSG00000079638.9	novel	799	4	NA	NA	17	-4	intron_retention	FALSE	canonical	3	16	junction_2	18.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATATATTTGTTTTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	36593736	36598455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36594405_36595944_36595991_36598229
ES.36837.1	chrX	+	767	5	NNC	ENSMUSG00000079637.11	novel	720	5	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	23.1988685068906	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36635294	36640033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639885
ES.36837.2	chrX	+	715	4	NNC	ENSMUSG00000079637.11	novel	762	4	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	20.3141986469235	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36635297	36640033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36635407_36635568_36635981_36637508_36637555_36639885
ES.36837.3	chrX	+	846	5	FSM	ENSMUSG00000079637.11	ENSMUST00000184688.8	720	5	-34	-92	-34	1	multi-exon	FALSE	canonical	2	3	junction_3	22.1585198061603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36635298	36640033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36637822_36637872_36639802
ES.36837.4	chrX	+	767	4	FSM	ENSMUSG00000079637.11	ENSMUST00000115190.11	762	4	-4	-1	-4	1	multi-exon	FALSE	canonical	3	17	junction_3	17.9133717900592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36635328	36640033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36639802
ES.36838.1	chrX	+	1104	3	NIC	ENSMUSG00000095698.3	novel	685	4	NA	NA	-376	89	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTTGTTTTGTGCTT	6513	False	NA	NA	False	AATAAA	-14	NA	36674704	36679365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36675169_36675331_36675744_36679137
ES.36839.1	chrX	+	815	4	FSM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	-18	2	-18	-2	multi-exon	FALSE	canonical	3	15	junction_3	24.1246761636296	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36712086	36723464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36723236
ES.36839.2	chrX	+	845	5	FSM	ENSMUSG00000096788.9	ENSMUST00000184746.2	735	5	-18	-92	4	1	multi-exon	FALSE	canonical	1	2	junction_3	31.4523449046331	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTTGTGCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	36712108	36723467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723236
ES.36839.3	chrX	+	724	5	NNC	ENSMUSG00000096788.9	novel	735	5	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	31.4523449046331	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATTTGTTTTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36712144	36723465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723319
ES.36839.4	chrX	+	766	3	ISM	ENSMUSG00000096788.9	ENSMUST00000072167.10	799	4	195	0	173	0	3prime_fragment	FALSE	canonical	3	15	junction_2	21	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36712299	36723466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36712790_36720942_36720989_36723236
ES.3684.1	chr10	-	6651	2	Antisense	novelGene_ENSMUSG00000113032.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTTCACCAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	99576067	99569210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_99575309_99575514
ES.36840.1	chrX	-	825	1	FSM	ENSMUSG00000080241.4	ENSMUST00000116499.4	451	1	-101	-273	-101	273	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAAGG	NA	False	NA	5	True	AATAAA	-19	NA	36807851	36807026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36807000_36807900
ES.36841.1	chrX	-	782	4	FSM	ENSMUSG00000079629.6	ENSMUST00000115169.4	795	4	15	-2	15	0	multi-exon	FALSE	canonical	2	5	junction_2	7.03957069398096	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATATTTGTTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	36825108	36820767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36820996_36822809_36822856_36824438_36824851_36825012
ES.36842.1	chrX	-	951	4	NNC	ENSMUSG00000079628.4	novel	979	4	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.80656320908194	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCATGTGTCTTTTTGA	6390	False	NA	NA	False	AATAAA	-18	NA	36832958	36828155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36828390_36829677_36829721_36832090_36832497_36832690
ES.36843.1	chrX	-	803	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	-22	-2	-22	2	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACATTTGTTTTGTGCTT	9207	False	NA	NA	False	AATAAA	-14	NA	36854952	36850647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
ES.36843.2	chrX	-	383	3	NIC	ENSMUSG00000079627.3	novel	779	4	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATACATTTGTTTTGTG	9212	False	NA	NA	False	AATAAA	-11	NA	36854947	36850650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_36850876_36852672_36852719_36854835
ES.36844.1	chrX	-	4159	4	Fusion	ENSMUSG00000081195.3_ENSMUSG00000106388.2	novel	322	3	NA	NA	-50	102	multi-exon	FALSE	canonical	2	3	junction_3	4.54606056566195	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTCAGGTGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36865134	36857920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_36858142_36859175_36859222_36861051_36864809_36864999
ES.36845.1	chrX	+	4623	3	NIC	ENSMUSG00000095180.11	novel	893	6	NA	NA	-48	-45	intron_retention	FALSE	canonical	3	2792	junction_1	567.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTTCCATTACCTCT	8457	False	NA	27	True	AATAAA	-17	NA	36891587	36897263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36891707_36892583_36893357_36893532
ES.36845.10	chrX	+	4225	4	NIC	ENSMUSG00000095180.11	novel	957	6	NA	NA	37	-3	intron_retention	FALSE	canonical	3	3927	junction_2	145.433451753332	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8542	False	NA	14	True	ATTAAA	-11	NA	36891672	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36892653_36893274_36893357_36893532_36893891_36894500
ES.36845.11	chrX	+	1042	6	FSM	ENSMUSG00000095180.11	ENSMUST00000179626.3	957	6	-88	3	37	-3	multi-exon	FALSE	canonical	0	0	junction_1	1594.13919091151	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8542	False	NA	14	True	ATTAAA	-11	NA	36891672	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36891896_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.12	chrX	+	3963	4	ISM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	37	-2	37	-1	intron_retention	FALSE	canonical	3	2792	junction_1	621.141422436684	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGTGATTCGAGTAATA	8542	False	NA	19	True	ATTAAA	-16	NA	36891672	36897310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532
ES.36845.14	chrX	+	908	6	NNC	ENSMUSG00000095180.11	novel	957	6	NA	NA	52	-46	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1592.14803331851	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTGTTCCATTACCTC	8557	False	NA	26	True	AATAAA	-16	NA	36891687	36897262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36891820_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.15	chrX	+	980	6	FSM	ENSMUSG00000095180.11	ENSMUST00000239523.1	868	6	-160	48	-160	-45	multi-exon	FALSE	canonical	3	15	junction_1	1588.16578479704	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTTCCATTACCTCT	9032	False	NA	27	True	AATAAA	-17	NA	36892162	36897263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36892366_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.16	chrX	+	874	6	NNC	ENSMUSG00000095180.11	novel	766	2	NA	NA	-150	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1593.74095762141	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTTCCATTACCTCT	9042	False	NA	27	True	AATAAA	-17	NA	36892172	36897263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36892270_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.2	chrX	+	909	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	-15	-1	-15	1	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGTGATTCGAGTAAT	8490	False	NA	18	True	ATTAAA	-15	NA	36891620	36897309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.3	chrX	+	4798	2	ISM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	-5	3	-5	-3	intron_retention	FALSE	canonical	3	2792	junction_1	0	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8500	False	NA	14	True	ATTAAA	-11	NA	36891630	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36891707_36892583
ES.36845.4	chrX	+	3387	5	ISM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	1	0	1	0	intron_retention	FALSE	canonical	3	2792	junction_1	551.22885446972	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	8506	False	NA	17	True	ATTAAA	-14	NA	36891636	36897308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500
ES.36845.6	chrX	+	896	7	NNC	ENSMUSG00000095180.11	novel	893	6	NA	NA	11	-49	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1871.64031593205	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATGTTTGTTCCATTAC	8516	False	NA	23	True	AATAAA	-13	NA	36891646	36897259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36891707_36892302_36892366_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ES.36845.7	chrX	+	1488	5	NIC	ENSMUSG00000095180.11	novel	893	6	NA	NA	12	-3	intron_retention	FALSE	canonical	3	2792	junction_1	540.640534458895	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8517	False	NA	14	True	ATTAAA	-11	NA	36891647	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36894547_36897041
ES.36845.8	chrX	+	4140	3	ISM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	31	3	31	-3	intron_retention	FALSE	canonical	3	2792	junction_1	722.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8536	False	NA	14	True	ATTAAA	-11	NA	36891666	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_36891707_36892583_36892653_36893274
ES.36845.9	chrX	+	3976	4	NIC	ENSMUSG00000095180.11	novel	893	6	NA	NA	31	-3	intron_retention	FALSE	canonical	3	2792	junction_1	535.752637780617	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTAGTGATTCGAG	8536	False	NA	14	True	ATTAAA	-11	NA	36891666	36897305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36891707_36892583_36893357_36893532_36893891_36894500
ES.36846.1	chrX	+	1101	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	-95	4	-95	-4	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGGCTCCATTGTC	NA	False	NA	10	True	AATAAA	-14	NA	36915691	36918730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
ES.36846.2	chrX	+	751	4	NNC	ENSMUSG00000006200.4	novel	1010	4	NA	NA	337	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	87.0899917709645	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGGCTCCATTGTC	NA	False	NA	10	True	AATAAA	-14	NA	36916123	36918730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_36916139_36916242_36916703_36917291_36917338_36918500
ES.36846.3	chrX	+	1321	2	NIC	ENSMUSG00000006200.4	novel	1010	4	NA	NA	460	-4	intron_retention	FALSE	canonical	3	187	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTTGGCTCCATTGTC	NA	False	NA	10	True	AATAAA	-14	NA	36916246	36918730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36917338_36918500
ES.36847.1	chrX	+	1836	3	NIC	ENSMUSG00000071767.5	novel	983	8	NA	NA	-54	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCCTCAGGTGTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	36926674	36930150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_36928246_36928868_36928915_36929931
ES.36848.1	chrX	-	1058	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	-178	2	-178	-2	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGGCTCCATTATC	900	False	NA	-3	True	AATAAA	-14	NA	36990825	36987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
ES.36848.2	chrX	-	699	4	NNC	ENSMUSG00000068048.9	novel	882	4	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.7207222984806	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTGGCTCCATTATC	1097	False	NA	-3	True	AATAAA	-14	NA	36990628	36987975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_36988177_36989156_36989203_36989828_36990127_36990474
ES.36849.1	chrX	-	2425	2	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-102	208	intron_retention	TRUE	canonical	2	7	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTCAATTGCCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	37034581	37029484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37031443_37034114
ES.36849.2	chrX	-	3429	2	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-78	208	intron_retention	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTCAATTGCCCTC	NA	False	NA	NA	False	AATAAA	-14	NA	37034557	37029484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37032471_37034114
ES.36849.3	chrX	-	1651	4	NNC	ENSMUSG00000081133.3	novel	451	3	NA	NA	-84	206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.32049379893857	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCAATTGCCC	NA	False	NA	NA	False	AATAAA	-12	NA	37034563	37029486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37030512_37031396_37031443_37032339_37032471_37034114
ES.3685.1	chr10	+	5498	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	150	0	-44	0	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTCTCATTTGATGC	NA	False	NA	NA	False	AATAAA	-23	NA	99851641	99936278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
ES.3685.2	chr10	+	3903	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	196	1549	0	-1549	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAATCGAAGTTATAAAT	NA	False	NA	NA	False	AATAAA	-28	NA	99851687	99934729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
ES.3685.3	chr10	+	5309	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	197	142	0	-142	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTGTATATACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	99851688	99936136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
ES.36850.1	chrX	+	684	3	FSM	ENSMUSG00000053909.9	ENSMUST00000115150.4	763	3	76	3	76	-3	multi-exon	FALSE	canonical	2	4	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTGTTTGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	37155427	37160565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37155824_37158275_37158322_37160323
ES.36851.1	chrX	+	921	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	-37	-8	-37	8	multi-exon	FALSE	canonical	3	73	junction_1	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGG	NA	False	NA	10	True	AATAAA	-23	NA	37210058	37218852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37210700_37211950_37211997_37218618
ES.36852.1	chrX	+	2440	1	Intergenic	novelGene_30168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTCTGGTGTATCAT	NA	False	NA	NA	False	NA	NA	NA	37255166	37257606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37255200_37257600
ES.36853.1	chrX	+	5182	2	FSM	ENSMUSG00000048047.4	ENSMUST00000049740.3	5122	2	-60	0	-60	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGTGATTTTTTTTG	NA	False	NA	5	True	AATAAA	-16	NA	37278609	37285923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37278960_37281091
ES.36853.2	chrX	+	4994	2	FSM	ENSMUSG00000048047.4	ENSMUST00000115142.3	2567	2	-67	-2360	-48	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGAGTGATTTTTTT	NA	False	NA	3	True	AATAAA	-14	NA	37278621	37285921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37278786_37281091
ES.36853.3	chrX	+	2611	2	FSM	ENSMUSG00000048047.4	ENSMUST00000115142.3	2567	2	-45	1	-26	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACCAGAGTAAGTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	37278643	37283560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37278786_37281091
ES.36853.4	chrX	+	2760	2	FSM	ENSMUSG00000048047.4	ENSMUST00000131124.2	2103	2	-41	-616	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCAGAGTAAGTCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	37278669	37283561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37278960_37281091
ES.36854.1	chrX	+	179	1	Intergenic	novelGene_30169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTTGAAATTCGAT	NA	False	NA	NA	False	NA	NA	NA	37295649	37295828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37295600_37295800
ES.36855.1	chrX	+	2662	2	NIC	ENSMUSG00000084009.2	novel	806	6	NA	NA	3444	103	intron_retention	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCCCATGTGTCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	37389188	37395008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_37391631_37394788
ES.36856.1	chrX	+	5345	1	Intergenic	novelGene_30171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	37498083	37503428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37498100_37503400
ES.36857.1	chrX	+	1577	4	Antisense	novelGene_ENSMUSG00000016534.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTGCAACATCGCCTA	6455	False	NA	NA	False	NA	NA	NA	37520878	37532045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37520939_37524272_37524431_37529006_37529222_37530901
ES.36857.2	chrX	+	615	1	Antisense	novelGene_ENSMUSG00000016534.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6455	False	NA	NA	False	NA	NA	NA	37520878	37521493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37520900_37521500
ES.36857.3	chrX	+	724	5	Antisense	novelGene_ENSMUSG00000016534.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGCCGCTTCAGCTGGA	6455	False	NA	NA	False	NA	NA	NA	37520878	37545300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37520939_37524272_37524431_37529006_37529222_37530901_37531022_37545129
ES.36857.4	chrX	+	1270	1	Antisense	novelGene_ENSMUSG00000016534.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTTGCAACATCGCCTA	311	False	NA	NA	False	NA	NA	NA	37530775	37532045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37530800_37532000
ES.36858.1	chrX	+	2766	1	Genic_Genomic	ENSMUSG00000087390.2	novel	NA	NA	NA	NA	3444	184	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAATCCTGAAT	NA	False	NA	NA	False	NA	NA	NA	37568781	37571547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_37568800_37571500
ES.36859.1	chrX	-	4364	3	ISM	ENSMUSG00000016534.16	ENSMUST00000074913.12	2184	9	29527	-1709	16223	1709	3prime_fragment	FALSE	canonical	3	19	junction_1	468	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGGATAACCTCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	37515804	37488524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37491159_37513143_37513309_37514239
ES.36859.10	chrX	-	2120	9	NNC	ENSMUSG00000016534.16	novel	1769	9	NA	NA	-23735	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	396.882775514383	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	37569066	37493938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37568509
ES.36859.11	chrX	-	1775	1	NIC	ENSMUSG00000016534.16	novel	1769	9	NA	NA	36314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	37495713	37493938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37493900_37495700
ES.36859.12	chrX	-	3084	11	NNC	ENSMUSG00000016534.16	novel	1769	9	NA	NA	3321	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	452.740808852041	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCTGTTTCAATTTGT	NA	False	NA	-3	True	AATAAA	-16	NA	37541970	37493940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37494449_37510517_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37540378_37540455_37540734
ES.36859.13	chrX	-	3757	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	-69	-84	-69	84	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTTAAGAATAGAAAGAGC	NA	False	NA	62	True	ATTAAA	-15	NA	37545400	37508299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.16	chrX	-	5989	8	ISM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	35	14440	-5	5	5prime_fragment	FALSE	canonical	3	893	junction_2	49.0027071305499	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545296	37508378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.17	chrX	-	3447	8	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	346.782646742355	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545304	37508378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529203_37545125
ES.36859.18	chrX	-	3641	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	19	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	411.184467929744	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545312	37508378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37544182_37544234_37545125
ES.36859.19	chrX	-	3551	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_5	320.24521854354	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545291	37508378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524290_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.2	chrX	-	3804	9	FSM	ENSMUSG00000016534.16	ENSMUST00000074913.12	2184	9	34	-1654	-6	1654	multi-exon	FALSE	canonical	3	19	junction_1	322.044615503815	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGATTTTAGATTGA	NA	False	NA	NA	False	AATAAA	-20	NA	37545297	37488579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37491159_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.21	chrX	-	3518	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-5	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	327.341349931536	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCACATTTTTTCCCA	NA	False	NA	-17	True	AATAAA	-24	NA	37545296	37508378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530957_37531018_37545125
ES.36859.23	chrX	-	5819	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	4189	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	328.166783053983	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCTCACATTTTTTC	NA	False	NA	-20	True	AATAAA	-21	NA	37541102	37508381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37538683
ES.36859.25	chrX	-	3695	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-23475	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	328.166783053983	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	False	NA	-22	True	AATAAA	-19	NA	37568806	37508383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37568509
ES.36859.26	chrX	-	3333	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	461.78951434128	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	False	NA	-22	True	AATAAA	-19	NA	37545296	37508383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37509737_37509970_37510729_37513143_37513309_37514239_37514304_37519794_37519919_37520726_37520939_37524272_37524439_37529017_37529222_37530901_37531018_37545125
ES.36859.28	chrX	-	3428	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.301413444618	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37545285	37508385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37508543_37508670_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.29	chrX	-	2855	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.301413444618	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37545290	37508385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37508753_37509458_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.3	chrX	-	5437	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	35	-3703	-5	-2	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATACTGTTCGTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	37545296	37490235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.30	chrX	-	5614	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	2695	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	329.149258505925	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37542596	37508385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37540378
ES.36859.31	chrX	-	3543	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	330.845861958405	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37545297	37508385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519819_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.32	chrX	-	2126	4	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	467.864177821821	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	False	NA	-24	True	AATAAA	-17	NA	37545296	37508385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510047_37529043_37529222_37530901_37531018_37545125
ES.36859.33	chrX	-	3551	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	324.81396117624	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATTTGCTCACATT	NA	False	NA	-25	True	AATAAA	-16	NA	37545304	37508386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524434_37529032_37529222_37530901_37531018_37545125
ES.36859.34	chrX	-	3697	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	412.010277949231	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATTTGCTCACATT	NA	False	NA	-25	True	AATAAA	-16	NA	37545281	37508386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37544087_37544234_37545125
ES.36859.35	chrX	-	3742	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	407.019792038558	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATTTGCTCACATT	NA	False	NA	-25	True	AATAAA	-16	NA	37545290	37508386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37527930_37528113_37529007_37529222_37530901_37531018_37545125
ES.36859.37	chrX	-	3423	10	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.301413444618	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAAATTTGCTCACATT	NA	False	NA	-25	True	AATAAA	-16	NA	37545291	37508386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37508997_37509134_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.38	chrX	-	3464	9	NNC	ENSMUSG00000016534.16	novel	3604	9	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	324.81396117624	863	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGAAATTTGCTCACAT	NA	False	NA	-26	True	AATAAA	-15	NA	37545296	37508387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524331_37529007_37529222_37530901_37531018_37545125
ES.36859.39	chrX	-	3331	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	27	246	-13	-246	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTATTTTTGTTTT	NA	False	NA	NA	False	AATACA	-13	NA	37545304	37508629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.4	chrX	-	2136	9	FSM	ENSMUSG00000016534.16	ENSMUST00000074913.12	2184	9	40	8	0	-8	multi-exon	FALSE	canonical	3	19	junction_1	322.044615503815	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAAGCAATACTGTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	37545291	37490241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37491159_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.40	chrX	-	3000	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	34	570	-6	-570	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTTTTGCATTTTGTT	NA	False	NA	NA	False	TATAAA	-40	NA	37545297	37508953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.41	chrX	-	2706	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	41	857	1	-857	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGAGCTCTCTGGGTTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	37545290	37509240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.42	chrX	-	1462	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	-5	2147	-5	-2147	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTATTGAAGGTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	37545336	37510530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.5	chrX	-	1990	1	Intergenic	novelGene_30170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCACGTGTCTCTGCT	NA	False	NA	NA	False	AAGAAA	-2	NA	37493253	37491263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37491300_37493300
ES.36859.6	chrX	-	3273	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	35	-1539	-5	1539	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTTGATTGATTAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	37545296	37492399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.7	chrX	-	3489	10	NNC	ENSMUSG00000016534.16	novel	1769	9	NA	NA	-16	1533	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	310.745340538948	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTAAAATGTTGATTGA	NA	False	NA	NA	False	AATAAA	-13	NA	37545307	37492405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37494449_37510517_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.8	chrX	-	2610	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	16	-857	16	857	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGACTGGTACTTATGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	37545315	37493081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.36859.9	chrX	-	1761	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	9	-1	9	1	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTTCAATTTGTAAC	NA	False	NA	0	True	AATAAA	-19	NA	37545322	37493937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ES.3686.1	chr10	+	1265	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-11273	263	multi-exon	FALSE	canonical	2	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100165424	100177887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100165494_100176691
ES.3686.2	chr10	+	1265	2	Genic_Genomic	ENSMUSG00000091101.3	novel	927	1	NA	NA	-994	263	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100175703	100177887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100175773_100176691
ES.36860.1	chrX	+	157	1	Intergenic	novelGene_30172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAACAAATA	6440	False	NA	NA	False	NA	NA	NA	37587918	37588075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37587900_37588100
ES.36861.1	chrX	+	158	1	Intergenic	novelGene_30173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37592700	37592858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37592700_37592900
ES.36862.1	chrX	+	151	1	Intergenic	novelGene_30174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-5	NA	37593493	37593644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37593500_37593600
ES.36863.1	chrX	+	197	1	Intergenic	novelGene_30175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAACCAGACACCTTAA	NA	False	NA	NA	False	NA	NA	NA	37595688	37595885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37595700_37595900
ES.36864.1	chrX	+	173	1	Intergenic	novelGene_30177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTGGGCTGTAGGC	NA	False	NA	NA	False	NA	NA	NA	37605561	37605734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37605600_37605700
ES.36865.1	chrX	+	173	2	Antisense	novelGene_ENSMUSG00000031095.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGAGTGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	37610914	37688090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37611038_37688040
ES.36865.2	chrX	+	6465	1	Antisense	novelGene_ENSMUSG00000031095.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37617384	37623849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_37617400_37623800
ES.36865.3	chrX	+	178	1	Intergenic	novelGene_30181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAGCTAGAAC	NA	False	NA	NA	False	NA	NA	NA	37658479	37658657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37658500_37658700
ES.36865.4	chrX	+	204	1	Intergenic	novelGene_30182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGTTTTTAAAAAAAGGG	NA	False	NA	NA	False	AATAAA	-9	NA	37663204	37663408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37663200_37663400
ES.36866.1	chrX	+	1080	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-201	-96	-124	96	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGACTCAATGTCCT	NA	False	NA	8	True	ATTAAA	-21	NA	37689330	37702399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ES.36866.2	chrX	+	731	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-5	96	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGACTCAATGTCCT	NA	False	NA	8	True	ATTAAA	-21	NA	37689526	37702399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ES.36866.3	chrX	+	741	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-5	87	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	247.742305632284	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTCAACAGATGACT	NA	False	NA	-1	True	ATTAAA	-12	NA	37689526	37702390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_37689656_37690805_37690959_37691452_37691551_37700642_37700711_37702097
ES.36866.4	chrX	+	781	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	-4	6	-4	-6	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAATTTCTGTTAGTTTC	NA	False	NA	11	True	AATAAA	-13	NA	37689527	37702297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ES.36866.5	chrX	+	1040	7	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	265.37960233095	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTTAGTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	37689527	37702301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37696964_37697209_37700631_37700711_37702097
ES.36866.6	chrX	+	593	5	NNC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	271.685479921177	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTCAACAGATGACT	NA	False	NA	-1	True	ATTAAA	-12	NA	37689531	37702390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_37689596_37691516_37691551_37694815_37694950_37700642_37700711_37702097
ES.36866.8	chrX	+	1389	6	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	109	96	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	233.438985604376	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGACTCAATGTCCT	NA	False	NA	8	True	ATTAAA	-21	NA	37689640	37702399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ES.36866.9	chrX	+	2763	8	NNC	ENSMUSG00000000355.14	novel	764	4	NA	NA	175	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.376176332074	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTTAGTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	37689706	37702301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37696282_37697090_37697209_37697668_37697746_37700631_37700711_37702097
ES.36867.1	chrX	+	205	1	Intergenic	novelGene_30185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGGAAACTGTAAAGCAT	NA	False	NA	NA	False	ATTAAA	-6	NA	37706603	37706808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_37706600_37706800
ES.36868.1	chrX	-	5967	2	Intergenic	novelGene_30176	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGGCCAATAAGTTG	NA	False	NA	NA	False	NA	NA	NA	37608081	37600208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37600810_37602715
ES.36868.100	chrX	-	2829	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	408.903322926092	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	7808	False	NA	-1	True	GATAAA	-18	NA	37653886	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640519_37640600_37641257_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.102	chrX	-	3105	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-11	-4	2	0	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	NA	False	NA	-1	True	GATAAA	-18	NA	37665071	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.103	chrX	-	6256	20	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-392	0	intron_retention	FALSE	non_canonical	3	1019	junction_19	125.341660496244	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	7763	False	NA	-1	True	GATAAA	-18	NA	37653931	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.104	chrX	-	2970	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	331.510383393221	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	NA	False	NA	-1	True	GATAAA	-18	NA	37665073	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37631005_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.106	chrX	-	2724	20	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-329	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	418.706476631789	1282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	7826	False	NA	-1	True	GATAAA	-18	NA	37653868	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37640530_37640600_37641259_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.107	chrX	-	5221	21	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	600	junction_20	210.999905213249	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	NA	False	NA	-1	True	GATAAA	-18	NA	37665073	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.108	chrX	-	3192	22	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_5	339.304410512444	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATTTGACTTCTTT	NA	False	NA	-3	True	GATAAA	-16	NA	37665058	37622448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629930_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.109	chrX	-	5258	21	NNC	ENSMUSG00000031095.16	novel	3090	23	NA	NA	5	2	intron_retention	FALSE	non_canonical	0	0	junction_6	391.757271789561	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATTTGACTTCTTT	NA	False	NA	-3	True	GATAAA	-16	NA	37665055	37622448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37632295_37633625_37633731_37634368_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.11	chrX	-	5190	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-55	-2045	-42	1745	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCACATTTGACAATTC	NA	False	NA	67	True	CATAAA	-20	NA	37665115	37620405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.111	chrX	-	2802	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-46	2	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_20	304.19475258459	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATTTGACTTCTTT	8246	False	NA	-3	True	GATAAA	-16	NA	37653448	37622448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653385
ES.36868.113	chrX	-	4143	5	ISM	ENSMUSG00000031095.16	ENSMUST00000147129.8	3103	19	20172	2	20035	2	intron_retention	FALSE	canonical	3	1337	junction_4	51.7415452030571	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATTTGACTTCTTT	NA	False	NA	-3	True	GATAAA	-16	NA	37633367	37622448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813
ES.36868.114	chrX	-	2943	23	NNC	ENSMUSG00000031095.16	novel	3090	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_20	381.412850329789	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTATTTGACTTCT	NA	False	NA	-5	True	GATAAA	-14	NA	37665045	37622450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653941_37653984_37661280_37661356_37664956
ES.36868.115	chrX	-	2900	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_20	329.801283144315	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTATTTGACTTCT	NA	False	NA	-5	True	GATAAA	-14	NA	37665061	37622450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653941_37653984_37661280_37661356_37665015
ES.36868.116	chrX	-	3026	23	NNC	ENSMUSG00000031095.16	novel	3090	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	308.492003325374	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTATTTGACTTCT	NA	False	NA	-5	True	GATAAA	-14	NA	37665071	37622450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665031
ES.36868.12	chrX	-	4637	22	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-345	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	301.288645774384	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	7810	False	NA	-20	True	AATAAA	-19	NA	37653884	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37652887_37653019_37653086_37653809
ES.36868.121	chrX	-	3224	21	ISM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-11	4949	2	-4949	5prime_fragment	FALSE	non_canonical	3	112	junction_20	298.414623468757	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCTATTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	37665071	37627399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.122	chrX	-	3157	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	-4958	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	343.901508429376	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGAAGTTGAGCTATT	NA	False	NA	NA	False	AATAAA	-16	NA	37665073	37627408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640598_37641256_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.123	chrX	-	173	1	Intergenic	novelGene_30179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAGTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37636607	37636434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37636400_37636600
ES.36868.124	chrX	-	177	1	Intergenic	novelGene_30180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	4957	False	NA	NA	False	NA	NA	NA	37656737	37656560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37656600_37656700
ES.36868.125	chrX	-	158	1	Intergenic	novelGene_30183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	37685947	37685789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37685800_37685900
ES.36868.126	chrX	-	173	1	Intergenic	novelGene_30184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCCTAGCAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	37701200	37701027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37701000_37701200
ES.36868.127	chrX	-	332	1	Intergenic	novelGene_30186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37714322	37713990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37714000_37714300
ES.36868.128	chrX	-	159	1	Intergenic	novelGene_30187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	37714323	37714164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37714200_37714300
ES.36868.129	chrX	-	1485	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	-43	7	-43	-7	multi-exon	FALSE	canonical	3	94	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGTGTTTCTATTACT	NA	False	NA	-9	True	ATTAAA	-11	NA	37724007	37719668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37721001_37723854
ES.36868.13	chrX	-	4873	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-3	1658	at_least_one_novel_splicesite	FALSE	non_canonical	2	13	junction_20	329.801283144315	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665076	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653941_37653984_37661280_37661356_37665015
ES.36868.130	chrX	-	4332	1	Genic_Genomic	ENSMUSG00000048970.10	novel	NA	NA	NA	NA	-36	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGTGTTTCTATTACT	NA	False	NA	-9	True	ATTAAA	-11	NA	37724000	37719668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_37719700_37724000
ES.36868.131	chrX	-	2365	1	NIC	ENSMUSG00000048970.10	novel	1449	2	NA	NA	48	-1890	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	37723916	37721551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37721600_37723900
ES.36868.14	chrX	-	5209	25	Fusion	ENSMUSG00000031095.16_ENSMUSG00000048970.10	novel	3344	23	NA	NA	2	1658	multi-exon	FALSE	non_canonical	0	0	junction_22	445.040346173493	1412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37723962	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37670287_37670374_37675688_37675760_37723854
ES.36868.19	chrX	-	4824	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-341	1658	at_least_one_novel_splicesite	FALSE	non_canonical	3	52	junction_20	294.224132252948	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	7814	False	NA	-20	True	AATAAA	-19	NA	37653880	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653751
ES.36868.2	chrX	-	2859	22	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-378	18990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	301.288645774384	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGATTTGGAGTCCTG	7777	False	NA	NA	False	AAGAAA	-5	NA	37653917	37603160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37603168_37622443_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.20	chrX	-	4998	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	332.854089716984	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665073	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640593_37641254_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.21	chrX	-	4868	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-279	1658	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_20	295.848609934203	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	7876	False	NA	-20	True	AATAAA	-19	NA	37653818	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653645
ES.36868.22	chrX	-	4929	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	1	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	328.306489162865	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665072	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37627988_37628932_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.23	chrX	-	4935	22	NIC	ENSMUSG00000031095.16	novel	3090	23	NA	NA	5	1658	combination_of_known_junctions	FALSE	non_canonical	3	26	junction_5	379.671704469273	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665055	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.24	chrX	-	5181	24	Fusion	ENSMUSG00000031095.16_ENSMUSG00000048970.10	novel	3344	23	NA	NA	-56	1658	multi-exon	FALSE	non_canonical	3	17	junction_23	385.242024926378	1412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37724020	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37675688_37675760_37723854
ES.36868.25	chrX	-	4782	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-37	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	404.87181613444	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	8255	False	NA	-20	True	AATAAA	-19	NA	37653439	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637407_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653385
ES.36868.26	chrX	-	4615	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-346	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	304.806758455255	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	7809	False	NA	-20	True	AATAAA	-19	NA	37653885	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37652930_37653809
ES.36868.27	chrX	-	4892	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1658	combination_of_known_junctions	FALSE	non_canonical	3	26	junction_5	327.325948626122	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665071	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.28	chrX	-	4950	24	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1658	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	326.580362942044	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665071	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37621148_37621197_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.29	chrX	-	4608	21	NNC	ENSMUSG00000031095.16	novel	3354	20	NA	NA	-218	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	304.806758455255	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	7937	False	NA	-20	True	AATAAA	-19	NA	37653757	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37652887_37653645
ES.36868.3	chrX	-	6062	1	Intergenic	novelGene_30178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	876	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTCATGTTGTGAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	37621126	37615064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37615100_37621100
ES.36868.30	chrX	-	4982	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	409.274294754884	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665071	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37627988_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640600_37641259_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.31	chrX	-	5052	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	384.320730059828	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37665073	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638473_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.35	chrX	-	4848	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	1	1658	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_20	304.19475258459	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	8156	False	NA	-20	True	AATAAA	-19	NA	37653538	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653385
ES.36868.36	chrX	-	2750	6	NNC	ENSMUSG00000031095.16	novel	3354	20	NA	NA	22376	1658	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	545.323536994324	1322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGGAAGATATTT	NA	False	NA	-20	True	AATAAA	-19	NA	37631026	37620492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628884_37628983_37629813_37629928_37630927
ES.36868.38	chrX	-	5067	24	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	1230	1652	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_22	389.761087211089	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTTCTGGGGAAG	NA	False	NA	-26	True	AATAAA	-13	NA	37663830	37620498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37661852_37661927_37663775
ES.36868.4	chrX	-	6323	1	Genic_Genomic	ENSMUSG00000031095.16	novel	NA	NA	NA	NA	31189	6260	mono-exon	FALSE	NA	NA	NA	NA	NA	1089	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTACACATGTATTTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	37622213	37615890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_37615900_37622200
ES.36868.40	chrX	-	5024	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-29	-1651	-29	1651	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665102	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.41	chrX	-	6324	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1651	intron_retention	FALSE	non_canonical	3	600	junction_21	215.369513188112	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665071	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.42	chrX	-	5229	20	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-348	1651	intron_retention	FALSE	non_canonical	3	1019	junction_19	124.760846013727	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	7807	False	NA	-27	True	AATAAA	-12	NA	37653887	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.43	chrX	-	4988	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	333.819039041284	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665073	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638162_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.46	chrX	-	5824	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1651	intron_retention	FALSE	non_canonical	3	600	junction_21	215.136828263511	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665071	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.47	chrX	-	4586	19	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-284	1651	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	418.958231808375	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	7871	False	NA	-27	True	AATAAA	-12	NA	37653823	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37650485_37650602_37652539_37653086_37653751
ES.36868.48	chrX	-	4755	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-344	1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	408.133299303059	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	7811	False	NA	-27	True	AATAAA	-12	NA	37653883	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638871_37639742_37639817_37640530_37640600_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.49	chrX	-	4968	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	5	1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	330.836446196956	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665055	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638094_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.5	chrX	-	6819	1	Genic_Genomic	ENSMUSG00000031095.16	novel	NA	NA	NA	NA	30118	5685	mono-exon	FALSE	NA	NA	NA	NA	NA	1318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCCTCTGTAGATCAG	NA	False	NA	NA	False	NA	NA	NA	37623284	37616465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_37616500_37623300
ES.36868.50	chrX	-	4796	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	0	1651	at_least_one_novel_splicesite	FALSE	non_canonical	3	20	junction_20	328.662667122888	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665073	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37652887_37653809_37653984_37661280_37661356_37665015
ES.36868.54	chrX	-	4990	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1651	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	331.840422666833	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTCTGGGGAA	NA	False	NA	-27	True	AATAAA	-12	NA	37665071	37620499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641356_37650481_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.55	chrX	-	2310	5	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	1650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	498.815597189984	1376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTTTCTGGGGA	NA	False	NA	-28	True	AATAAA	-11	NA	37665071	37620500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626031_37653941_37653984_37661280_37661356_37665015
ES.36868.57	chrX	-	4683	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-346	1650	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	307.681405840522	1331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATGTTTCTGGGGA	7809	False	NA	-28	True	AATAAA	-11	NA	37653885	37620500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627910_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.58	chrX	-	3982	21	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	11189	-870	-345	870	3prime_fragment	FALSE	non_canonical	3	1019	junction_20	124.443109491848	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTTTGCTTCCTGGT	7810	False	NA	NA	False	AGTAAA	-24	NA	37653884	37621280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.59	chrX	-	3958	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-272	861	at_least_one_novel_splicesite	FALSE	non_canonical	3	52	junction_20	294.224132252948	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGAGGACTCTGCTTTG	7883	False	NA	NA	False	AGTAAA	-15	NA	37653811	37621289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653751
ES.36868.6	chrX	-	6354	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-3	2296	intron_retention	FALSE	non_canonical	3	600	junction_21	210.498253530116	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGCTCTAAGTGCTGT	NA	False	NA	NA	False	NA	NA	NA	37665063	37619854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653984_37661280_37661356_37665015
ES.36868.60	chrX	-	3956	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	10	-622	-3	622	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCGCCTCCTGATTTGG	NA	False	NA	NA	False	ACTAAA	-19	NA	37665063	37621528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.61	chrX	-	3842	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	1	-499	1	499	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAGTGGTTAAATGTT	NA	False	NA	NA	False	AGTAAA	-24	NA	37665072	37621651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.62	chrX	-	3529	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	11	349	at_least_one_novel_splicesite	FALSE	non_canonical	2	3	junction_20	304.19475258459	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGTCTTGTACTACAAGA	8166	False	NA	NA	False	ATTAAA	-15	NA	37653528	37621801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653385
ES.36868.63	chrX	-	3521	21	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	11128	-348	-406	348	3prime_fragment	FALSE	non_canonical	3	1019	junction_20	124.443109491848	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTCTTGTACTACAAG	7749	False	NA	NA	False	ATTAAA	-14	NA	37653945	37621802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.66	chrX	-	3488	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	-144	0	144	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTGGCATTCTGTT	NA	False	NA	NA	False	AAGAAA	-12	NA	37665073	37622006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.68	chrX	-	6945	19	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	91	intron_retention	FALSE	non_canonical	3	600	junction_18	219.928074662357	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTTGTTTACCCATTT	NA	False	NA	63	True	AATAGA	-14	NA	37665071	37622059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.69	chrX	-	3582	24	Fusion	ENSMUSG00000031095.16_ENSMUSG00000048970.10	novel	3344	23	NA	NA	-26	89	multi-exon	FALSE	non_canonical	3	17	junction_23	385.242024926378	1380	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGTTGTTTACCCAT	NA	False	NA	61	True	AATAGA	-12	NA	37723990	37622061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37675688_37675760_37723854
ES.36868.7	chrX	-	5138	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-42	-1752	-42	1752	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACAATTCATACTTG	NA	False	NA	74	True	CATAAA	-27	NA	37665115	37620398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.70	chrX	-	3492	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	-13	-389	0	89	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGTTGTTTACCCAT	NA	False	NA	61	True	AATAGA	-12	NA	37665073	37622061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.71	chrX	-	3250	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-231	88	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_20	295.848609934203	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTGGTTGTTTACCCA	7924	False	NA	60	True	AATAGA	-11	NA	37653770	37622062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653645
ES.36868.73	chrX	-	3401	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-33	-24	-33	24	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATGCAAATTTTATTTA	NA	False	NA	-4	True	AATAAA	-44	NA	37665106	37622126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.74	chrX	-	5973	17	NIC	ENSMUSG00000031095.16	novel	3354	20	NA	NA	406	21	intron_retention	FALSE	non_canonical	3	1064	junction_14	107.350404633611	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATGCAAATTTTAT	8698	False	NA	-7	True	AATAAA	-41	NA	37652996	37622129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ES.36868.75	chrX	-	3004	20	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-327	18	combination_of_known_junctions	FALSE	non_canonical	3	26	junction_5	303.133259232941	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAACTGCATGCAAATTT	7828	False	NA	-10	True	AATAAA	-38	NA	37653866	37622132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.76	chrX	-	7658	16	NIC	ENSMUSG00000031095.16	novel	3354	20	NA	NA	11	16	intron_retention	FALSE	canonical	3	1146	junction_6	92.9252028963797	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAAACTGCATGCAAAT	8166	False	NA	-12	True	AATAAA	-36	NA	37653528	37622134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37641363_37650485_37650602_37652539
ES.36868.77	chrX	-	3253	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	16	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_8	341.239424262792	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTAAACTGCATGCAAAT	NA	False	NA	-12	True	AATAAA	-36	NA	37665071	37622134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.78	chrX	-	3306	22	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-1299	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	301.288645774384	1298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTAAACTGCATGCAAA	6856	False	NA	-13	True	AATAAA	-35	NA	37654838	37622135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37654758
ES.36868.79	chrX	-	3103	20	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-348	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	412.794845519581	1297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGATACTTAAACTGC	7807	False	NA	-20	True	AATAAA	-28	NA	37653887	37622142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636866_37638059_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641259_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.8	chrX	-	5935	20	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-326	1751	intron_retention	FALSE	non_canonical	3	1019	junction_19	122.781498601752	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGACAATTCATACTT	7829	False	NA	73	True	CATAAA	-26	NA	37653865	37620399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809
ES.36868.80	chrX	-	4741	19	NIC	ENSMUSG00000031095.16	novel	3354	20	NA	NA	-52	4	intron_retention	FALSE	non_canonical	3	1064	junction_16	112.887849951475	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCATTTAAAGATACTTAAA	8240	False	NA	-24	True	AATAAA	-24	NA	37653454	37622146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ES.36868.82	chrX	-	3326	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	308.492003325374	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	False	NA	-28	True	AATAAA	-20	NA	37665071	37622150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665031
ES.36868.84	chrX	-	3368	23	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	383.522925925874	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	False	NA	-28	True	AATAAA	-20	NA	37665045	37622150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638870_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ES.36868.86	chrX	-	3102	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-279	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	52	junction_20	294.224132252948	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAAGTCATTTAAAGATA	7876	False	NA	-30	True	AATAAA	-18	NA	37653818	37622152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653751
ES.36868.88	chrX	-	3264	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-32	112	-32	-112	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGGTCTTCATGATTC	NA	False	NA	-140	True	AAGAAA	-2	NA	37665105	37622262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.90	chrX	-	3268	24	Fusion	ENSMUSG00000031095.16_ENSMUSG00000048970.10	novel	3344	23	NA	NA	-41	56	multi-exon	FALSE	non_canonical	3	17	junction_23	385.242024926378	1366	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGGACTTTTCTC	NA	False	NA	2	True	AATGAA	-16	NA	37724005	37622390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37675688_37675760_37723854
ES.36868.92	chrX	-	2928	21	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	-240	53	at_least_one_novel_splicesite	FALSE	non_canonical	3	44	junction_20	295.848609934203	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGTTGTGTGGACTTTT	7915	False	NA	-1	True	AATGAA	-13	NA	37653779	37622393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653645
ES.36868.93	chrX	-	3822	22	NIC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	52	intron_retention	FALSE	non_canonical	3	600	junction_21	210.498253530116	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATAGTTGTGTGGACTTT	NA	False	NA	-2	True	AATGAA	-12	NA	37665071	37622394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653984_37661280_37661356_37665015
ES.36868.94	chrX	-	3091	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	-42	295	-42	1	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGACTTCTTTTAT	NA	False	NA	0	True	GATAAA	-19	NA	37665115	37622445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ES.36868.98	chrX	-	1630	15	NNC	ENSMUSG00000031095.16	novel	3344	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	406.595923366134	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATTTGACTTCTTTTA	NA	False	NA	-1	True	GATAAA	-18	NA	37665071	37622446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637336_37653941_37653984_37661280_37661356_37665015
ES.36869.1	chrX	-	173	1	Intergenic	novelGene_30188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	37726899	37726726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37726700_37726900
ES.3687.1	chr10	+	1250	2	Genic_Genomic	ENSMUSG00000112856.2	novel	910	1	NA	NA	-954	263	multi-exon	FALSE	canonical	3	20	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100186000	100188127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100186070_100186946
ES.3687.2	chr10	+	1271	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-6095	296	multi-exon	FALSE	canonical	2	11	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGAGTCATAAAGTCT	NA	False	NA	NA	False	AATAAA	-23	NA	100186001	100193275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100186070_100192072
ES.3687.3	chr10	+	1261	3	Genic_Genomic	ENSMUSG00000091552.3_ENSMUSG00000112856.2	novel	883	1	NA	NA	-953	284	multi-exon	FALSE	non_canonical	0	0	junction_2	10	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100186001	100193263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100186070_100186946_100187261_100192384
ES.3687.4	chr10	+	1184	2	Genic_Genomic	ENSMUSG00000091552.3	novel	883	1	NA	NA	-974	209	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGTGGATAAATAGTAG	NA	False	NA	NA	False	AATACA	-19	NA	100191122	100193188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100191191_100192072
ES.36870.1	chrX	-	176	1	Intergenic	novelGene_30189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAACTTTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	37743527	37743351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37743400_37743500
ES.36871.1	chrX	-	172	1	Intergenic	novelGene_30190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	37745993	37745821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37745800_37746000
ES.36872.1	chrX	-	177	1	Intergenic	novelGene_30191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAGAAATA	NA	False	NA	NA	False	NA	NA	NA	37881262	37881085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37881100_37881300
ES.36873.1	chrX	-	163	1	Intergenic	novelGene_30192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	37914065	37913902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_37913900_37914100
ES.36874.1	chrX	+	176	1	Intergenic	novelGene_30193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	38092151	38092327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_38092200_38092300
ES.36875.1	chrX	+	244	1	Intergenic	novelGene_30194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTTTTCCTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	38487876	38488120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_38487900_38488100
ES.36876.1	chrX	-	178	1	Intergenic	novelGene_30195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAAAGTCACA	NA	False	NA	NA	False	NA	NA	NA	38781003	38780825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_38780800_38781000
ES.36877.1	chrX	+	174	1	Intergenic	novelGene_30196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	39200862	39201036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_39200900_39201000
ES.36878.1	chrX	+	144	1	Intergenic	novelGene_30197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	40423406	40423550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_40423400_40423600
ES.36879.1	chrX	+	4701	11	FSM	ENSMUSG00000001986.17	ENSMUST00000148212.2	5206	11	-178	683	0	-228	multi-exon	FALSE	canonical	0	0	junction_2	2.10713075057055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGCTTTGTTTTGTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	40490180	40701748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_40490533_40491677_40491837_40567436_40567677_40629952_40630141_40658764_40658819_40677340_40677503_40680586_40680755_40684558_40684664_40685495_40685604_40687330_40687538_40698790
ES.36879.2	chrX	+	1895	11	FSM	ENSMUSG00000001986.17	ENSMUST00000148212.2	5206	11	75	3236	-8	-2781	multi-exon	FALSE	canonical	0	0	junction_2	2.10713075057055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTATTTTGTGGTCTTA	NA	False	NA	NA	False	AATACA	-9	NA	40490433	40699195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_40490533_40491677_40491837_40567436_40567677_40629952_40630141_40658764_40658819_40677340_40677503_40680586_40680755_40684558_40684664_40685495_40685604_40687330_40687538_40698790
ES.3688.1	chr10	+	1250	2	Genic_Genomic	ENSMUSG00000096744.2	novel	910	1	NA	NA	-954	263	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100196245	100198372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_100196315_100197191
ES.36880.1	chrX	+	1844	1	Intergenic	novelGene_30198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATACTGTATCTATAGGCT	NA	False	NA	NA	False	NA	NA	NA	40930334	40932178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_40930300_40932200
ES.36881.1	chrX	+	4572	2	Intergenic	novelGene_30199	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTCAAGGCAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	40977202	41006516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_40981756_41006497
ES.36881.2	chrX	+	3974	1	Intergenic	novelGene_30200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGACATCCCCGTTCT	NA	False	NA	NA	False	NA	NA	NA	40995094	40999068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_40995100_40999100
ES.36882.1	chrX	-	5092	14	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5427	-1	intron_retention	FALSE	canonical	2	157	junction_2	20.4895701567188	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGTATATTGTTACT	NA	False	NA	0	True	AATAAA	-25	NA	40914380	40883868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312
ES.36882.11	chrX	-	8411	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	37.4149821118037	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTGTATATTGTTA	NA	False	NA	-2	True	AATAAA	-23	NA	41000778	40883870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902034_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.12	chrX	-	9379	36	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-3	intron_retention	FALSE	canonical	0	0	junction_16	39.2175928868248	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTGTATATTGTTA	NA	False	NA	-2	True	AATAAA	-23	NA	41000773	40883870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.13	chrX	-	5081	9	NNC	ENSMUSG00000037475.16	novel	2213	9	NA	NA	-13	-3	intron_retention	FALSE	canonical	0	0	junction_3	89.2670676957634	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTGTATATTGTTA	NA	False	NA	-2	True	AATAAA	-23	NA	40903212	40883870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40893164_40893280_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40902886_40903074
ES.36882.14	chrX	-	5798	23	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-7548	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	53.0351512935268	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTGTGTATATTGTTA	NA	False	NA	-2	True	AATAAA	-23	NA	40927497	40883870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914402_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460
ES.36882.17	chrX	-	8330	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	37.0374613831236	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTGTGTATATTGTT	NA	False	NA	-3	True	AATAAA	-22	NA	41000770	40883871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902106_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.19	chrX	-	7567	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	37.9897914087233	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTGTGTATATTGTT	NA	False	NA	-3	True	AATAAA	-22	NA	41000763	40883871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.22	chrX	-	8496	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.0493283126201	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATTGTGTATATTGT	NA	False	NA	-4	True	AATAAA	-21	NA	41000763	40883872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.24	chrX	-	13183	38	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	37.8898677024206	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATTGTGTATATTGT	NA	False	NA	-4	True	AATAAA	-21	NA	41000763	40883872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40889456_40889531_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.26	chrX	-	7181	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	38.3660429357504	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCATTGTGTATATTG	NA	False	NA	-5	True	AATAAA	-20	NA	41000774	40883873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.27	chrX	-	7672	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.8461678035744	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCATTGTGTATATTG	NA	False	NA	-5	True	AATAAA	-20	NA	41000760	40883873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891863_40892331_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903075_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.28	chrX	-	8410	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	37.4149821118037	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCATTGTGTATATTG	NA	False	NA	-5	True	AATAAA	-20	NA	41000759	40883873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.29	chrX	-	7433	38	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.7735167584119	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCATTGTGTATATTG	NA	False	NA	-5	True	AATAAA	-20	NA	41000778	40883873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886510_40892322_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.3	chrX	-	8920	38	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	4	-1	intron_retention	FALSE	canonical	2	5	junction_7	37.7913807465274	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGTATATTGTTACT	NA	False	NA	0	True	AATAAA	-25	NA	41000774	40883868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.31	chrX	-	7637	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-28	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.7880900640998	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATCATTGTGTATATT	NA	False	NA	-6	True	AATAAA	-19	NA	41000806	40883874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891863_40892331_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.32	chrX	-	10290	29	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-5134	-7	intron_retention	FALSE	non_canonical	0	0	junction_12	52.7182901111644	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATCATTGTGTATATT	2686	False	NA	-6	True	AATAAA	-19	NA	40952965	40883874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914896_40915039_40916059_40916336_40919569_40919883_40920707_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905
ES.36882.39	chrX	-	7629	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	2	5	junction_37	43.6130304008455	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATATCATTGTGTATA	NA	False	NA	-8	True	AATAAA	-17	NA	41000772	40883876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_41000677
ES.36882.4	chrX	-	7706	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGTATATTGTTACT	NA	False	NA	0	True	AATAAA	-25	NA	41000782	40883868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.44	chrX	-	8265	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6	-12	combination_of_known_splicesites	FALSE	canonical	1	5	junction_37	46.7383966452018	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTATATCATTGTGT	NA	False	NA	-11	True	AATAAA	-14	NA	41000772	40883879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902106_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_41000677
ES.36882.46	chrX	-	7527	37	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_35	44.4409373616292	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTATATCATTGTGT	NA	False	NA	-11	True	AATAAA	-14	NA	41000758	40883879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40986668_40986728_41000677
ES.36882.47	chrX	-	3265	6	NNC	ENSMUSG00000037475.16	novel	3506	9	NA	NA	-123	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	84.6749077354089	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGACTATATCATTGT	NA	False	NA	-13	True	AATAAA	-12	NA	40896050	40883881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891872_40892338_40892410_40895278_40895440_40895521_40895592_40895910
ES.36882.49	chrX	-	9544	37	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	7	-16	intron_retention	FALSE	canonical	2	149	junction_18	23.5241535972952	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAATGACTATATCATT	NA	False	NA	-15	True	AATAAA	-10	NA	41000771	40883883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.5	chrX	-	8534	40	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	53.8104643628978	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	-1	True	AATAAA	-24	NA	41000772	40883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963059_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.50	chrX	-	7499	40	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	2	-233	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_36	46.2184305960156	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGTCCCTTGCCATT	NA	False	NA	NA	False	ATTAAA	-31	NA	41000776	40884100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963064_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.51	chrX	-	7466	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	3	-234	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTTGTCCCTTGCCAT	NA	False	NA	NA	False	ATTAAA	-30	NA	41000775	40884101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.52	chrX	-	8100	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	4	-238	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	37.0374613831236	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGCTCACTTGTCCCTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	41000774	40884105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902106_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.54	chrX	-	5047	14	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6774	-239	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	55.2433026276227	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCTCACTTGTCCCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	40913033	40884106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966
ES.36882.55	chrX	-	5526	23	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-7533	-242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.059212649891	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAGCGCTCACTTGTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	40927482	40884109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891863_40892331_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460
ES.36882.56	chrX	-	3621	1	NIC	ENSMUSG00000037475.16	novel	3506	9	NA	NA	7708	-243	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCAGCGCTCACTTGTC	NA	False	NA	NA	False	ATTAAA	-21	NA	40887731	40884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40884100_40887700
ES.36882.57	chrX	-	7377	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	8	-243	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_18	42.5840866067709	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCAGCGCTCACTTGTC	NA	False	NA	NA	False	ATTAAA	-21	NA	41000755	40884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922245_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.59	chrX	-	7383	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	-4	243	-4	-243	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCAGCGCTCACTTGTC	NA	False	NA	NA	False	ATTAAA	-21	NA	41000782	40884110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.6	chrX	-	8184	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.0493283126201	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	-1	True	AATAAA	-24	NA	41000773	40883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902257_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.60	chrX	-	8272	40	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.4235465534991	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAATATACCAGCGC	NA	False	NA	NA	False	ATTAAA	-12	NA	41000773	40884119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40887439_40887534_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.61	chrX	-	7789	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-2	-310	intron_retention	FALSE	canonical	2	149	junction_19	23.2040839205445	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAACGCCTAAGAATCGT	NA	False	NA	74	True	AATAAA	-16	NA	41000765	40884177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.62	chrX	-	7311	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.6629709013375	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAACTCAGTTTTAAT	NA	False	NA	0	True	AATAAA	-31	NA	41000773	40884251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891874_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961557_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.63	chrX	-	7337	40	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-2	-384	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_36	46.2184305960156	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAACTCAGTTTTAAT	NA	False	NA	0	True	AATAAA	-31	NA	41000765	40884251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963064_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.65	chrX	-	7303	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-2	-387	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTAGAACTCAGTTTT	NA	False	NA	-3	True	AATAAA	-28	NA	41000765	40884254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.66	chrX	-	7231	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	4	387	4	-387	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTAGAACTCAGTTTT	NA	False	NA	-3	True	AATAAA	-28	NA	41000774	40884254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.68	chrX	-	4016	9	NNC	ENSMUSG00000037475.16	novel	3506	9	NA	NA	-11	-390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.9566830259983	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATCTTAGAACTCAGT	NA	False	NA	-6	True	AATAAA	-25	NA	40903210	40884257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902013_40902886_40903074
ES.36882.7	chrX	-	7677	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	52.9281708945078	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	-1	True	AATAAA	-24	NA	41000772	40883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903075_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945790_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.71	chrX	-	7153	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	37.7473834649337	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACCTCATCTTAGAAC	NA	False	NA	-11	True	AATAAA	-20	NA	41000773	40884262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914402_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.72	chrX	-	6395	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	0	1227	0	892	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGTCATTTTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	41000778	40885094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.73	chrX	-	6462	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-3	890	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGATGTCATTTTCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	41000766	40885096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.74	chrX	-	9451	15	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	3559	890	intron_retention	FALSE	non_canonical	0	0	junction_7	53.3494926625075	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGATGTCATTTTCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	40916248	40885096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903075_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059
ES.36882.75	chrX	-	5976	34	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	6	890	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.2219706551552	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGATGTCATTTTCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	41000772	40885096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.76	chrX	-	2935	8	NNC	ENSMUSG00000037475.16	novel	2213	9	NA	NA	263	890	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	72.9867195076597	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGATGTCATTTTCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	40902860	40885096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902013
ES.36882.79	chrX	-	6364	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.7880900640998	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCGATGTCATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	41000758	40885099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891863_40892331_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.8	chrX	-	7693	40	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	54.1664952204843	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	-1	True	AATAAA	-24	NA	41000750	40883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949007_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963059_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.80	chrX	-	6651	41	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	7	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	60.111100264427	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCGATGTCATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	41000771	40885099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40955796_40955958_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963059_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.81	chrX	-	6813	38	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	7	887	intron_retention	FALSE	canonical	2	15	junction_17	36.2261382132653	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCGATGTCATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	41000771	40885099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922245_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.82	chrX	-	6326	38	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	887	combination_of_known_splicesites	FALSE	canonical	2	5	junction_37	37.1602653078551	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCGATGTCATTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	41000773	40885099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_41000677
ES.36882.84	chrX	-	6220	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	4	1398	4	721	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGTCATGTTTTGAA	NA	False	NA	NA	False	GATAAA	-16	NA	41000774	40885265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.85	chrX	-	6203	39	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	7	719	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	38.055798077468	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATGGTCATGTTTTG	NA	False	NA	NA	False	GATAAA	-14	NA	41000771	40885267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903086_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.86	chrX	-	5294	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	13	2315	-2	178	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAAGATCTTTGTGTTT	NA	False	NA	NA	False	TATAAA	-18	NA	41000765	40886182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.87	chrX	-	3939	31	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	-64	19578	-64	25	5prime_fragment	FALSE	canonical	3	149	junction_12	22.2343328111179	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGACTCCAGCTACAA	NA	False	NA	NA	False	NA	NA	NA	41000842	40903445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.88	chrX	-	3447	28	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.5004916757362	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAGAAAAAGAGAAGAG	NA	False	NA	NA	False	AATAAA	-7	NA	41000765	40912285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40912388_40912500_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.89	chrX	-	3750	21	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	5	36909	5	-8492	5prime_fragment	FALSE	canonical	3	149	junction_2	22.6773014267571	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATCTTTCTACCCTT	NA	False	NA	NA	False	NA	NA	NA	41000773	40920776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.9	chrX	-	6728	1	NIC	ENSMUSG00000037475.16	novel	3506	9	NA	NA	4842	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTGTATATTGTTAC	NA	False	NA	-1	True	AATAAA	-24	NA	40890597	40883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40883900_40890600
ES.36882.90	chrX	-	3508	21	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	13	37143	-2	-8726	5prime_fragment	FALSE	canonical	3	149	junction_2	22.6773014267571	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTGAAACATTTATTA	NA	False	NA	NA	False	NA	NA	NA	41000765	40921010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.91	chrX	-	3627	22	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	5	-8727	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	57.8286231883826	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTGAAACATTTATT	NA	False	NA	NA	False	NA	NA	NA	41000773	40921011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40962951_40963064_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.92	chrX	-	3158	21	NNC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-2	-9078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.6554123334046	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGCTGTCTCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	41000765	40921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40922366_40923974_40924093_40925375_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.94	chrX	-	2181	17	NNC	ENSMUSG00000037475.16	novel	2697	11	NA	NA	4	-16484	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.2884507072755	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACGTATGAATCTTTT	NA	False	NA	NA	False	GATAAA	-18	NA	41000774	40928768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_40929209_40929326_40929381_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.95	chrX	-	2429	9	NIC	ENSMUSG00000037475.16	novel	2697	11	NA	NA	12	1540	intron_retention	FALSE	canonical	3	169	junction_3	17.8518206354422	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTATTTTTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	41000751	40947461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ES.36882.96	chrX	-	4144	1	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	-1756	-17028	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	40989934	40985790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40985800_40989900
ES.36882.97	chrX	-	2565	1	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-29451	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	41000778	40998213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_40998200_41000800
ES.36883.1	chrX	-	310	1	Intergenic	novelGene_30201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAACTATGTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	41008597	41008287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41008300_41008600
ES.36883.2	chrX	-	185	1	Intergenic	novelGene_30202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41008599	41008414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41008400_41008600
ES.36884.1	chrX	-	176	1	Intergenic	novelGene_30203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATTACTATCAGA	NA	False	NA	NA	False	NA	NA	NA	41032729	41032553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41032600_41032700
ES.36885.1	chrX	-	178	1	Intergenic	novelGene_30204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	41038759	41038581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41038600_41038800
ES.36886.1	chrX	-	176	1	Intergenic	novelGene_30205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGGAACGAAAAG	NA	False	NA	NA	False	NA	NA	NA	41089673	41089497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41089500_41089700
ES.36887.1	chrX	+	209	1	Intergenic	novelGene_30206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAAAAAGATGATGGGG	NA	False	NA	NA	False	NA	NA	NA	41147286	41147495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_41147300_41147500
ES.36888.1	chrX	+	182	1	Intergenic	novelGene_30207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATGATGGAAG	NA	False	NA	NA	False	NA	NA	NA	41147518	41147700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_41147500_41147700
ES.36889.1	chrX	+	6449	7	NIC	ENSMUSG00000025860.16	novel	6834	6	NA	NA	-73	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.4594577868766	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41148482	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41148729_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.10	chrX	+	4358	8	NIC	ENSMUSG00000025860.16	novel	6834	6	NA	NA	0	-2053	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.3297939528291	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTGCCTCTTCCTGTA	NA	False	NA	NA	False	ATTAAA	-19	NA	41149270	41196480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41149365_41155557_41155680_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.11	chrX	+	6286	7	NIC	ENSMUSG00000025860.16	novel	6834	6	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	42.1175603387576	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATCTTCTTTGTA	NA	False	NA	17	True	AATAAA	-13	NA	41149272	41198532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41149365_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.12	chrX	+	5510	7	NIC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	50.6096170044126	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTTCTTTGTATTTG	NA	False	NA	21	True	AATAAA	-17	NA	41149272	41198536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41149365_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.13	chrX	+	6475	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	75	-8	-7	8	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156787	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.14	chrX	+	4406	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	82	2054	0	-2054	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTGCCTCTTCCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	41156794	41196479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.15	chrX	+	5555	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	7	8	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156801	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.17	chrX	+	5485	7	NNC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	60	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.1400358010362	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41156854	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190889_41191074_41193667
ES.36889.18	chrX	+	3841	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	153	2548	71	2289	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTGAGAGTTAAGCA	NA	False	NA	NA	False	ATTAAA	-15	NA	41156865	41195985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.19	chrX	+	2605	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	1960	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGTAACTGACTGTCT	NA	False	NA	NA	False	AATAGA	-10	NA	41156866	41195656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.2	chrX	+	6555	8	NIC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	-59	7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	45.7941267065584	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41148496	41198540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41148729_41157233_41157360_41183248_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.20	chrX	+	5249	4	NNC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.6627449623354	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTGTATTTGATT	NA	False	NA	24	True	AATAAA	-20	NA	41156866	41198539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41156934_41157233_41157360_41190889_41191074_41193667
ES.36889.21	chrX	+	6402	8	NNC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.6504539775346	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTTTGTATTTGATTT	NA	False	NA	25	True	AATAAA	-21	NA	41156866	41198540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190865_41191074_41193667
ES.36889.23	chrX	+	4328	2	ISM	ENSMUSG00000025860.16	ENSMUST00000126375.2	487	3	127	21921	90	-2	5prime_fragment	FALSE	canonical	3	44	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGAGGCTCAGAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	41156884	41161512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41156934_41157233
ES.36889.24	chrX	+	6402	8	NNC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	210	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	40.1492114950402	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATCTTCTTTGTATTTG	NA	False	NA	21	True	AATAAA	-17	NA	41157004	41198536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41157083_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.25	chrX	+	6473	7	ISM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	377	-8	-185	8	3prime_fragment	FALSE	canonical	3	60	junction_1	23.6531651628745	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41157089	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.26	chrX	+	6665	7	FSM	ENSMUSG00000025860.16	ENSMUST00000115095.9	6670	7	13	-8	1	8	multi-exon	FALSE	canonical	3	22	junction_1	35.08283847632	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41157287	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.27	chrX	+	5727	6	FSM	ENSMUSG00000025860.16	ENSMUST00000145065.2	5407	6	-312	-8	33	8	multi-exon	FALSE	canonical	2	7	junction_1	43.8880393729317	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41157319	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41157750_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.28	chrX	+	4556	7	FSM	ENSMUSG00000025860.16	ENSMUST00000115095.9	6670	7	60	2054	48	-2054	multi-exon	FALSE	canonical	3	22	junction_1	35.08283847632	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTGCCTCTTCCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	41157334	41196479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.29	chrX	+	6283	8	NNC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	48	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.445190131877	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTTTGTATTTGAT	NA	False	NA	23	True	AATAAA	-19	NA	41157334	41198538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667_41197664_41197995
ES.36889.3	chrX	+	6629	10	NNC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	-59	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	49.136494194523	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTTATCTTCTTTG	NA	False	NA	15	True	AATAAA	-11	NA	41148496	41198530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41148729_41155557_41155680_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667_41194604_41194646
ES.36889.30	chrX	+	186	1	Intergenic	novelGene_30209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCCACTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	41169893	41170079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_41169900_41170100
ES.36889.31	chrX	+	5848	2	ISM	ENSMUSG00000025860.16	ENSMUST00000026978.7	6834	6	-4021	12762	-4021	2177	5prime_fragment	FALSE	canonical	3	86	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTAAGACTTTAGGTAAC	NA	False	NA	NA	False	NA	NA	NA	41178583	41185771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41184150_41185489
ES.36889.32	chrX	+	6986	7	NNC	ENSMUSG00000025860.16	novel	6834	6	NA	NA	-2377	-34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.1175603387576	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGACTTATTCAATAA	NA	False	NA	-16	True	ATTAAA	-15	NA	41180227	41198499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41181053_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.33	chrX	+	5189	4	ISM	ENSMUSG00000025860.16	ENSMUST00000026978.7	6834	6	5075	1	5075	-1	3prime_fragment	FALSE	canonical	3	86	junction_2	20.4341761653255	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATCTTCTTTGTA	NA	False	NA	17	True	AATAAA	-13	NA	41187679	41198532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.34	chrX	+	5080	1	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	10848	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATCTTCTTTGTA	NA	False	NA	17	True	AATAAA	-13	NA	41193452	41198532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41193500_41198500
ES.36889.4	chrX	+	6679	9	NIC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	-55	8	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.0215642389522	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41148500	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41148729_41155557_41155680_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.7	chrX	+	4531	3	ISM	ENSMUSG00000025860.16	ENSMUST00000224454.2	693	4	-34	22080	-34	0	5prime_fragment	FALSE	canonical	2	2	junction_1	0.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAGGCTCAGAGTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	41149236	41161514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41149365_41155557_41155680_41157233
ES.36889.8	chrX	+	6452	8	NIC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	-29	8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	39.5644656071014	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTGTATTTGATTTG	NA	False	NA	26	True	AATAAA	-22	NA	41149241	41198541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41149365_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.36889.9	chrX	+	6572	9	NIC	ENSMUSG00000025860.16	novel	6670	7	NA	NA	-29	6	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	45.8257569495584	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTGTATTTGATT	NA	False	NA	24	True	AATAAA	-20	NA	41149241	41198539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41149365_41155557_41155680_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ES.3689.1	chr10	-	1247	2	Genic_Genomic	ENSMUSG00000096640.4	novel	914	1	NA	NA	-993	259	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACAAGTATTCTAGA	NA	False	NA	NA	False	AATAAA	-11	NA	100219415	100217249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_100218428_100219346
ES.36890.1	chrX	-	8283	1	Antisense	novelGene_ENSMUSG00000025860.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTATTAAGGAGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	41166609	41158326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_41158300_41166600
ES.36890.2	chrX	-	3105	1	Intergenic	novelGene_30208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAGTCCAAGAGGTG	NA	False	NA	NA	False	NA	NA	NA	41166581	41163476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41163500_41166600
ES.36891.1	chrX	-	5343	1	Intergenic	novelGene_30210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATTTTGACTGATATGA	NA	False	NA	NA	False	NA	NA	NA	41176232	41170889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41170900_41176200
ES.36892.1	chrX	-	165	1	Intergenic	novelGene_30211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	41220204	41220039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41220000_41220200
ES.36893.1	chrX	-	175	1	Intergenic	novelGene_30212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAGAAATGAC	NA	False	NA	NA	False	NA	NA	NA	41227292	41227117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41227100_41227300
ES.36894.1	chrX	+	163	1	Genic_Genomic	ENSMUSG00000025862.15	novel	NA	NA	NA	NA	-64	-56706	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGGAAAAAAAATACAGA	NA	False	NA	NA	False	NA	NA	NA	41238129	41238292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_41238100_41238300
ES.36894.10	chrX	+	5198	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	-38	1011	-38	-1001	multi-exon	FALSE	canonical	3	50	junction_1	38.2930798352529	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41238155	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.11	chrX	+	4403	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-133	1685	-38	-1685	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTACAGTTTTTCTTAG	NA	False	NA	NA	False	AATAAA	-23	NA	41238155	41364367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.12	chrX	+	5642	30	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-38	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	50.2281122283743	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATAAACCTACCGT	NA	False	NA	-8	True	NA	NA	NA	41238155	41366035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336856_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.13	chrX	+	5964	35	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-38	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	50.2526144545293	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATAAACCTACCGT	NA	False	NA	-8	True	NA	NA	NA	41238155	41366035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139_41364352_41364403_41364601_41364655
ES.36894.14	chrX	+	4137	32	NNC	ENSMUSG00000025862.15	novel	5955	33	NA	NA	-22	-1568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	59.3240277674359	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAGAATCTTCTCACAT	NA	False	NA	NA	False	AATATA	-25	NA	41238171	41364484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312312_41315690_41315740_41317087_41317212_41318000_41318100_41318195_41318261_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41346950_41348335_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.15	chrX	+	4466	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	-22	1727	-22	-1717	multi-exon	FALSE	canonical	3	50	junction_1	38.2930798352529	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGGACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	41238171	41364335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.16	chrX	+	4867	24	NNC	ENSMUSG00000025862.15	novel	5955	33	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	59.4766717306141	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTATGCTTTATCTC	NA	False	NA	11	True	AATAAA	-14	NA	41238173	41366054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.17	chrX	+	4631	30	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-10	-1005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.1493701877423	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGGTGCTGATTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	41238183	41365047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41239576_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.19	chrX	+	5931	34	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	53.8223449113275	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTATGCTTTATCTC	NA	False	NA	11	True	AATAAA	-14	NA	41238420	41366054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290876_41294928_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341933_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.20	chrX	+	4020	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	132	1803	3	-1803	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACAGATTTTTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	41238420	41364249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.21	chrX	+	5819	33	NNC	ENSMUSG00000025862.15	novel	5955	33	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	43.3856142452484	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41238422	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318280_41322753_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.22	chrX	+	3960	33	NIC	ENSMUSG00000025862.15	novel	5955	33	NA	NA	-3	-1803	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4008463448398	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACAGATTTTTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	41238556	41364249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41238639_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.23	chrX	+	5315	30	NNC	ENSMUSG00000025862.15	novel	295	3	NA	NA	3	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8563509702758	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAAAAATAAACCTACCG	NA	False	NA	-9	True	NA	NA	NA	41238562	41366034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238639_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.24	chrX	+	5745	33	NIC	ENSMUSG00000025862.15	novel	295	3	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4008463448398	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41238574	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41238639_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.25	chrX	+	5200	29	NNC	ENSMUSG00000025862.15	novel	295	3	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.3114787892304	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41238584	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238639_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.26	chrX	+	6191	33	NIC	ENSMUSG00000025862.15	novel	699	4	NA	NA	99	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4008463448398	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41238658	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.27	chrX	+	4749	33	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-123	-987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.4008463448398	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGCGCAGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-33	NA	41238907	41365065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238963_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.28	chrX	+	5933	34	NIC	ENSMUSG00000025862.15	novel	699	4	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	43.3986157967765	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTATGCTTTATCT	NA	False	NA	10	True	AATAAA	-13	NA	41239028	41366053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.29	chrX	+	4732	25	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.0797555128074	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATAAACCTACCGT	NA	False	NA	-8	True	NA	NA	NA	41239030	41366035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239169_41239576_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.3	chrX	+	5110	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-156	1001	-61	-1001	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41238132	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.30	chrX	+	4919	34	NIC	ENSMUSG00000025862.15	novel	699	4	NA	NA	3	-1008	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	43.3986157967765	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAATTGGTGCTGATTT	NA	False	NA	NA	False	AATAAA	-12	NA	41239033	41365044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.31	chrX	+	4719	33	NIC	ENSMUSG00000025862.15	novel	699	4	NA	NA	4	-1096	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4008463448398	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTTGCAGAAAATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	41239034	41364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.32	chrX	+	3577	30	NNC	ENSMUSG00000025862.15	novel	699	4	NA	NA	11	-1807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8563509702758	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTGTACAGATTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	41239041	41364245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.33	chrX	+	4577	24	NNC	ENSMUSG00000025862.15	novel	699	4	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.0079744559289	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239079	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239169_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312199_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.34	chrX	+	3524	30	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	81	-1803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	57.7135284610094	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACAGATTTTTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	41239111	41364249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239169_41239576_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317098_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.35	chrX	+	4261	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-52	-1717	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGGACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	41239525	41364335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.36	chrX	+	4656	24	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.3571516706038	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATCTCTTGTAATCA	NA	False	NA	20	True	AATAAA	-23	NA	41239542	41366063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.37	chrX	+	5953	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-23	4	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41239554	41366056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.38	chrX	+	5848	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-23	0	-23	0	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	False	NA	19	True	AATAAA	-22	NA	41239554	41366062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.39	chrX	+	4860	25	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-23	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	43.2829033478835	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATGCTTTATCTCT	NA	False	NA	12	True	AATAAA	-15	NA	41239554	41366055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338929_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.4	chrX	+	6301	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	-61	-69	-61	69	multi-exon	FALSE	canonical	3	50	junction_1	38.2930798352529	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAATGTGTTTGAGTGG	NA	False	NA	88	True	NA	NA	NA	41238132	41366131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.40	chrX	+	6548	31	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	-7979	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	41.2014158332777	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAAGTGAACATTGGG	NA	False	NA	NA	False	AATAAA	-19	NA	41239558	41358073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318101_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242
ES.36894.41	chrX	+	5301	29	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	41.5566370346862	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTATGCTTTATCTC	NA	False	NA	11	True	AATAAA	-14	NA	41239558	41366054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.42	chrX	+	4830	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-19	1014	-19	-1004	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTGCTGATTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	41239558	41365048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.43	chrX	+	4025	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-19	1819	-19	-1809	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTCTGTACAGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	41239558	41364243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.44	chrX	+	5353	29	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.7233072711689	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239558	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.45	chrX	+	4950	34	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-19	-1001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	44.5628290173273	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41239558	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325938_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.46	chrX	+	4943	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-18	-1001	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41239559	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.47	chrX	+	4143	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	-17	1699	-17	-1689	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAAGCTACAGTTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	41239560	41364363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.49	chrX	+	5825	33	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-11	-4052	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	33.5323858148731	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAATTTGTCATAAACT	NA	False	NA	NA	False	AATAAA	-18	NA	41239566	41362000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121
ES.36894.5	chrX	+	1889	5	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	-60	58775	-60	-2619	5prime_fragment	FALSE	canonical	3	50	junction_1	48.9866053120646	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTGTTTAGATTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	41238133	41307287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211
ES.36894.51	chrX	+	5407	30	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	46.4308264077185	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATGCTTTATCTCTTG	NA	False	NA	14	True	AATAAA	-17	NA	41239566	41366057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.53	chrX	+	4040	28	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-9	-1001	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_27	49.475714900175	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41239568	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358289_41364213
ES.36894.54	chrX	+	5415	30	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	47.2297493864893	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239572	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336832_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.56	chrX	+	5790	34	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	44.4543492177198	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239572	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.57	chrX	+	4807	33	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-1	-1001	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	39.9701060168722	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41239576	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312320_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.58	chrX	+	4769	34	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-1	-1096	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.3251069559597	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTTGCAGAAAATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	41239576	41364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41256584_41256634_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.59	chrX	+	5260	29	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.0478609177923	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATGCTTTATCTCT	NA	False	NA	12	True	AATAAA	-15	NA	41239576	41366055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312187_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.6	chrX	+	6323	34	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-55	73	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	38.8715480162427	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTTTGAGTGGGATC	NA	False	NA	92	True	NA	NA	NA	41238138	41366135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41239576_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.60	chrX	+	4113	34	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	3	-1803	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	44.3797784840349	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACAGATTTTTCTCT	NA	False	NA	NA	False	AATAAA	-21	NA	41239580	41364249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342560_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.61	chrX	+	5668	31	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	11	-8828	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	29.0810362034551	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATTATGCCTGGCATT	NA	False	NA	NA	False	AATAAA	-19	NA	41239588	41357224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242
ES.36894.62	chrX	+	4565	31	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	31	-1004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	49.4723716386789	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTGCTGATTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	41239608	41365048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335926_41336733_41336931_41338881_41338953_41339208_41339297_41341957_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.64	chrX	+	5057	2	NNC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	46	-33445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	41239623	41261553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239712_41256584
ES.36894.65	chrX	+	5977	34	NNC	ENSMUSG00000025862.15	novel	294	3	NA	NA	-142	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.4054816498061	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41239748	41366052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41239966_41290731_41290872_41294954_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.66	chrX	+	4775	33	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	-22	-1003	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	36.8033201627244	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTGCTGATTTTATAA	NA	False	NA	NA	False	AATAAA	-17	NA	41239868	41365049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.67	chrX	+	4081	33	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	-18	-1693	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	36.8033201627244	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGATAAGCTACAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	41239872	41364359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.68	chrX	+	5766	33	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	36.8033201627244	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41239884	41366056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.69	chrX	+	5868	34	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	42.0706694798964	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATGCTTTATCTCT	NA	False	NA	12	True	AATAAA	-15	NA	41239892	41366055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.7	chrX	+	5236	34	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	-52	-1001	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	38.8715480162427	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41238141	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41239576_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.70	chrX	+	4825	34	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	36	-1006	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	42.0706694798964	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGGTGCTGATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	41239926	41365046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.71	chrX	+	5125	1	Intergenic	novelGene_30213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41256393	41261518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_41256400_41261500
ES.36894.72	chrX	+	4679	32	ISM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	51152	1014	49673	-1004	3prime_fragment	FALSE	canonical	3	108	junction_29	24.5889411112798	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTGCTGATTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	41290729	41365048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.73	chrX	+	5795	33	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	52537	8	49674	2	3prime_fragment	FALSE	canonical	3	63	junction_29	33.133194741075	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTATGCTTTATCTC	NA	False	NA	11	True	AATAAA	-14	NA	41290730	41366054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.74	chrX	+	4078	28	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	53917	-988	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	46.7481064807293	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTGCGCAGTTTGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	41294973	41365064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.76	chrX	+	5414	30	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	68016	6	65153	4	3prime_fragment	FALSE	canonical	3	63	junction_26	34.4294415393088	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41306209	41366056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.77	chrX	+	3759	26	NNC	ENSMUSG00000025862.15	novel	6171	34	NA	NA	65173	-1096	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	48.4217141373578	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTTGCAGAAAATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	41306229	41364956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.78	chrX	+	4029	16	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	87632	8726	84769	-8716	internal_fragment	FALSE	canonical	3	63	junction_15	33.329066393565	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTTTTTGGGATCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	41325825	41357336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242
ES.36894.79	chrX	+	3497	13	ISM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	101202	27	98339	-17	3prime_fragment	FALSE	canonical	3	63	junction_9	49.7026575412891	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATAAACCTACCGT	NA	False	NA	-8	True	NA	NA	NA	41339395	41366035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ES.36894.8	chrX	+	4562	29	NNC	ENSMUSG00000025862.15	novel	5955	33	NA	NA	-48	-1001	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	45.2486892357228	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	41238145	41365051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323630_41336851_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.80	chrX	+	5828	7	ISM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	107344	1015	105865	-1005	intron_retention	FALSE	canonical	3	108	junction_5	35.6670560726406	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGGTGCTGATTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	41346921	41365047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121
ES.36894.82	chrX	+	2674	6	ISM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	109895	5	108416	5	3prime_fragment	FALSE	canonical	3	108	junction_3	41.629797020884	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATGCTTTATCTCTTG	NA	False	NA	14	True	AATAAA	-17	NA	41349472	41366057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36894.9	chrX	+	6096	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	-137	-4	-42	4	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATGCTTTATCTCTT	NA	False	NA	13	True	AATAAA	-16	NA	41238151	41366056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ES.36895.1	chrX	-	5942	22	Antisense	novelGene_ENSMUSG00000025862.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAAGGCTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	41355932	41314409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_41317210_41317998_41318098_41318193_41318276_41322747_41322856_41323522_41323633_41325163_41325282_41325825_41325931_41335841_41335936_41336055_41336144_41336724_41336929_41338879_41338951_41339206_41339295_41339395_41339476_41341927_41342021_41342550_41342726_41345728_41345870_41346900_41347003_41348229_41348379_41349478_41349610_41351535_41351760_41354962_41355153_41355242
ES.36895.2	chrX	-	6005	23	Antisense	novelGene_ENSMUSG00000025862.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAAGGCTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	41364589	41314409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_41317210_41317998_41318101_41318198_41318276_41322747_41322856_41323522_41323633_41325163_41325282_41325825_41325931_41335841_41335936_41336055_41336144_41336724_41336929_41338879_41338951_41339206_41339476_41341927_41342021_41342550_41342726_41345728_41345870_41346900_41347003_41348229_41348379_41349478_41349621_41351548_41351760_41354962_41355153_41358257_41358381_41360116_41360200_41364139
ES.36895.3	chrX	-	6819	20	Antisense	novelGene_ENSMUSG00000025862.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAACAAGGCTTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	41355930	41314409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_41318098_41318193_41318276_41322747_41322856_41323522_41323633_41325163_41325282_41325825_41325931_41335841_41335936_41336055_41336144_41336724_41336929_41338879_41338951_41339206_41339295_41339395_41339476_41341927_41342021_41342550_41342726_41345728_41345870_41346900_41347003_41348229_41348379_41349478_41349610_41351535_41351760_41354962
ES.36896.1	chrX	+	2080	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-17	587	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGCTCTTTCCTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	41578550	41580988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_41580411_41580768
ES.36896.2	chrX	+	1974	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-17	587	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGCTCTTTCCTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	41578550	41580988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_41580313_41580776
ES.36896.3	chrX	+	2992	2	Genic_Genomic	ENSMUSG00000105993.2	novel	1834	1	NA	NA	-16	1500	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTTTTGTGTGGTTT	NA	False	NA	5	True	AATAAA	-18	NA	41578551	41581901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_41580411_41580768
ES.36897.1	chrX	-	6381	1	Intergenic	novelGene_30214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41662062	41655681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_41655700_41662100
ES.36898.1	chrX	+	200	1	Intergenic	novelGene_30215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAATGAAAGGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	42208750	42208950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_42208800_42209000
ES.36899.1	chrX	-	2414	2	Intergenic	novelGene_30216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTTCTTCATGATGCT	NA	False	NA	NA	False	AATAAA	-15	NA	42298557	42226630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_42228178_42297690
ES.369.1	chr1	-	180	1	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAATAATTATT	NA	False	NA	NA	False	NA	NA	NA	41834061	41833881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_41833900_41834100
ES.3690.1	chr10	-	6722	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	-1	-728	-1	728	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTAATTTATCCTTT	NA	False	NA	NA	False	GATAAA	-14	NA	100323213	100279035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ES.3690.11	chr10	-	3714	3	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	38395	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100284734	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283020_100283186_100283606_100284685
ES.3690.12	chr10	-	6050	15	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.1205649389735	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100323212	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284693_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320912_100320988_100323023
ES.3690.13	chr10	-	6030	15	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_13	31.4078665565277	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100323199	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320927_100320988_100323023
ES.3690.14	chr10	-	6157	16	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	37.5419173132587	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100323212	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100314769_100314869_100320912_100320988_100323023
ES.3690.16	chr10	-	3469	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	34	2490	10	1786	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTTTTCTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	100323178	100282253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ES.3690.17	chr10	-	2628	1	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	4	-6732	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100323197	100320569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_100320600_100323200
ES.3690.2	chr10	-	6010	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	-17	0	-17	0	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323229	100279763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ES.3690.3	chr10	-	6069	15	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	29.291288668079	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323213	100279763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320912_100320988_100323023
ES.3690.4	chr10	-	4687	8	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	26277	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	44.6286263032405	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTGTCTTGTGATG	NA	False	NA	0	True	ATTAAA	-22	NA	100296852	100279764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292406_100292488_100292909_100293022_100294776_100294898_100296821
ES.3690.5	chr10	-	7600	12	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	9353	-1	intron_retention	FALSE	canonical	0	0	junction_10	43.2557262248557	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTGTCTTGTGATG	NA	False	NA	0	True	ATTAAA	-22	NA	100313776	100279764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292406_100292488_100292909_100293022_100294776_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100312418_100312638_100313666
ES.3690.6	chr10	-	5922	14	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.0054065558036	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGATTGTCTTGTGATG	NA	False	NA	0	True	ATTAAA	-22	NA	100323207	100279764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312573_100313666_100313885_100323023
ES.3690.8	chr10	-	5920	15	NNC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.2026196496361	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100323212	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100281726_100281788_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ES.3690.9	chr10	-	6971	4	ISM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	33227	10	33144	-10	3prime_fragment	FALSE	canonical	3	93	junction_2	7.71722460186015	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	False	NA	-9	True	ATTAAA	-13	NA	100289985	100279773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243
ES.36900.1	chrX	+	213	1	Intergenic	novelGene_30217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATCCTATTATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	42542425	42542638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_42542400_42542600
ES.36901.1	chrX	-	4326	2	Intergenic	novelGene_30218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTTTGCATCCTTGG	NA	False	NA	NA	False	CATAAA	-24	NA	43141281	43130273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_43132319_43139000
ES.36902.1	chrX	-	188	1	Intergenic	novelGene_30219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTACTTTGCTCA	NA	False	NA	NA	False	NA	NA	NA	43688636	43688448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_43688400_43688600
ES.36903.1	chrX	-	3644	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	-131	-4	-131	4	multi-exon	FALSE	canonical	3	37	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTTTTCTTTAAAAT	NA	False	NA	-1	True	AATAAA	-44	NA	43879205	43875442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_43877171_43877289
ES.36903.2	chrX	-	3608	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	-112	-1	-76	1	multi-exon	FALSE	canonical	3	16	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCTGTTTTTCTTTAA	NA	False	NA	-4	True	AATAAA	-41	NA	43879150	43875445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_43877171_43877267
ES.36903.3	chrX	-	3274	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	1	220	1	-220	multi-exon	FALSE	canonical	3	16	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGCATTTTCTTGC	NA	False	NA	NA	False	TATAAA	-43	NA	43879037	43875666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_43877171_43877267
ES.36903.4	chrX	-	2109	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	46	1354	10	-1354	multi-exon	FALSE	canonical	3	37	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCATGTTCCAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	43879028	43876800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_43877171_43877289
ES.36903.5	chrX	-	2231	1	NIC	ENSMUSG00000045284.10	novel	3509	2	NA	NA	17	-1380	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	43879057	43876826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_43876800_43879100
ES.36904.1	chrX	+	203	1	Intergenic	novelGene_30220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATAGACCCTCTAA	NA	False	NA	NA	False	NA	NA	NA	45509224	45509427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_45509200_45509400
ES.36905.1	chrX	-	5066	23	NIC	ENSMUSG00000031099.17	novel	4798	23	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	9	junction_16	5.32517023357272	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTCCTGTTTTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	46981448	46898245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.10	chrX	-	4648	23	NNC	ENSMUSG00000031099.17	novel	4798	23	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_2	6.19200364106071	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTCTCACTTCTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	46981436	46898513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_46900146_46912241_46912373_46912622_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.11	chrX	-	3761	24	NNC	ENSMUSG00000031099.17	novel	3991	24	NA	NA	-26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.92738463238404	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTCTCACTTCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	46981455	46898514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915377_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943598_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.13	chrX	-	3823	24	NIC	ENSMUSG00000031099.17	novel	4024	24	NA	NA	-53	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.06361986129624	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGACTTTCTCACTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	46981482	46898516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_46898998_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.2	chrX	-	3932	24	NIC	ENSMUSG00000031099.17	novel	3991	24	NA	NA	-11	-88	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	5.5376354545258	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCTGTCAGTGTGCGT	NA	False	NA	NA	False	AATAAA	-19	NA	46981440	46898334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.3	chrX	-	4932	23	FSM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	35	-169	2	-94	multi-exon	FALSE	canonical	0	0	junction_21	6.17462817162712	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTGTTTGCTGTCAGT	NA	False	NA	NA	False	AATAAA	-43	NA	46981394	46898340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975973_46976076_46981102
ES.36905.4	chrX	-	3782	24	FSM	ENSMUSG00000031099.17	ENSMUST00000101616.9	3991	24	-53	262	-20	1	multi-exon	FALSE	canonical	0	0	junction_22	6.29309340266527	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCACTTCTTTGTTGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	46981449	46898508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975973_46976076_46981102
ES.36905.5	chrX	-	4854	24	NNC	ENSMUSG00000031099.17	novel	4798	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	6.24726783382333	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCACTTCTTTGTTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	46981395	46898509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46932466_46932572_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.6	chrX	-	3797	24	NIC	ENSMUSG00000031099.17	novel	3991	24	NA	NA	-53	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	5.5376354545258	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTCACTTCTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	46981482	46898511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36905.7	chrX	-	3750	25	NNC	ENSMUSG00000031099.17	novel	3991	24	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.17042052850149	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTCACTTCTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	46981765	46898511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_46899067_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975973_46976076_46981102_46981327_46981740
ES.36905.8	chrX	-	4838	23	NIC	ENSMUSG00000031099.17	novel	4798	23	NA	NA	-57	-2	intron_retention	FALSE	canonical	2	9	junction_16	5.32517023357272	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTCACTTCTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	46981486	46898511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ES.36906.1	chrX	+	131	1	FSM	ENSMUSG00000068014.6	ENSMUST00000119328.2	483	1	381	-29	381	29	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-12	NA	46989602	46989733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_46989600_46989700
ES.36907.1	chrX	-	174	1	Intergenic	novelGene_30221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46996110	46995936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_46995900_46996100
ES.36908.1	chrX	+	177	1	Intergenic	novelGene_30222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTAACAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	46998861	46999038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_46998900_46999000
ES.36909.1	chrX	+	5083	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-513	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.356458305114	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATCTGACTGAGAAC	NA	False	NA	20	True	AATAAA	-21	NA	47000750	47054748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47000822_47001441_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020494_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.10	chrX	+	5188	23	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2902961141656	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001327	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001846_47001926_47005351_47005432_47009037_47009077_47019219_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.11	chrX	+	5014	22	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.5878938574164	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001328	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001503_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.12	chrX	+	5019	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	34.8107338343024	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTCATTGTGATCTG	NA	False	NA	11	True	AATAAA	-12	NA	47001329	47054739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.14	chrX	+	3066	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-1	-1973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9406799321008	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTCGGTGTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	47001330	47052667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020494_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.15	chrX	+	5249	22	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	26.542824679188	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001330	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.16	chrX	+	5310	25	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.6572397864386	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTCATTGTGATCTG	NA	False	NA	11	True	AATAAA	-12	NA	47001330	47054739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47004949_47005080_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.17	chrX	+	4131	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	70	1052	2	-947	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCAGCTGCCAGCTTC	NA	False	NA	NA	False	TTTAAA	-18	NA	47001333	47053693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.19	chrX	+	5119	23	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.1826206885046	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATCTGACTGAGAAC	NA	False	NA	20	True	AATAAA	-21	NA	47001334	47054748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020494_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.2	chrX	+	2325	12	NNC	ENSMUSG00000001173.16	novel	3210	19	NA	NA	17	5985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.8339528750649	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTAAGTGCATCTATT	NA	False	NA	NA	False	NA	NA	NA	47001280	47026182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019229_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177
ES.36909.20	chrX	+	2949	23	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	3	-1971	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.1785951036924	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCGGTGTTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	47001334	47052669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019821_47020506_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027276_47030011_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.21	chrX	+	5138	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.0185668430763	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGATCTGACTGAGA	NA	False	NA	18	True	AATAAA	-19	NA	47001334	47054746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009040_47009077_47019247_47019359_47019774_47019862_47020494_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.22	chrX	+	3276	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	71	1906	3	-1801	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGACTTGTCTACAG	NA	False	NA	NA	False	NA	NA	NA	47001334	47052839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.23	chrX	+	3081	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	4	-1971	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	25.9866860380401	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCGGTGTTTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	47001335	47052669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.24	chrX	+	5769	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	29.4556677676192	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001338	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.3	chrX	+	5213	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	17	1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	25.9866860380401	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGATCTGACTGAGA	NA	False	NA	18	True	AATAAA	-19	NA	47001280	47054746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.30	chrX	+	4951	22	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	33	-3	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	33.0088286135681	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATTGTGATCTGACT	NA	False	NA	14	True	AATAAA	-15	NA	47001376	47054742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.32	chrX	+	2226	12	ISM	ENSMUSG00000001173.16	ENSMUST00000115020.8	3210	19	67	19767	38	6005	5prime_fragment	FALSE	non_canonical	0	0	junction_1	31.3700915623162	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAAAGGCTATGG	NA	False	NA	NA	False	NA	NA	NA	47001381	47026202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177
ES.36909.33	chrX	+	5149	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	38	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.2797870852994	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001381	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019270_47019359_47019774_47019862_47020260_47020322_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.35	chrX	+	5132	23	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.0268804971724	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001381	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037259_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.36	chrX	+	5694	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	38	556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.8803018275155	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGCCAGCAAAATCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	47001381	47055301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001842_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.39	chrX	+	5784	21	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	39	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	27.1640847443826	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001382	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.4	chrX	+	5224	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	30	-1	-21	1	multi-exon	FALSE	non_canonical	0	0	junction_1	28.8803018275155	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGATCTGACTGAGA	NA	False	NA	18	True	AATAAA	-19	NA	47001293	47054746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.40	chrX	+	5282	24	NNC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.9537615259363	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001382	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47001569_47001845_47001926_47005351_47005432_47007041_47007218_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.44	chrX	+	4840	21	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	502	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.5604969833021	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001845	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001926_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.45	chrX	+	6332	21	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	2516	-4	combination_of_known_splicesites	FALSE	canonical	3	64	junction_16	16.8243870616436	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47003859	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.46	chrX	+	3911	12	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-2091	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_7	17.3171677107043	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47025176	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.47	chrX	+	9788	6	NNC	ENSMUSG00000001173.16	novel	2910	5	NA	NA	-6984	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7584964787962	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTGATCTGACTGAGA	NA	False	NA	18	True	AATAAA	-19	NA	47042181	47054746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47048576_47048787_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.48	chrX	+	3028	7	NNC	ENSMUSG00000001173.16	novel	2910	5	NA	NA	-4573	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.9369929271345	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47044592	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47044750_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.49	chrX	+	1058	1	Genic_Genomic	ENSMUSG00000001173.16	novel	NA	NA	NA	NA	-3773	481	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTAGCTGTCTGTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	47045392	47046450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_47045400_47046400
ES.36909.50	chrX	+	4851	6	NNC	ENSMUSG00000001173.16	novel	2910	5	NA	NA	-2053	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.7584964787962	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47047112	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47048575_47048787_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.51	chrX	+	4048	3	NIC	ENSMUSG00000001173.16	novel	2910	5	NA	NA	-25	-6	intron_retention	FALSE	canonical	3	96	junction_2	8	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTCATTGTGATCTG	NA	False	NA	11	True	AATAAA	-12	NA	47049140	47054739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47050339_47050956_47051085_47052017
ES.36909.52	chrX	+	3820	4	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	2	0	intron_retention	FALSE	canonical	3	96	junction_2	8.33999733546454	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47049167	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47050339_47050956_47051085_47052017_47052130_47052336
ES.36909.53	chrX	+	3010	3	ISM	ENSMUSG00000001173.16	ENSMUST00000115013.2	2910	5	1430	-105	1430	0	3prime_fragment	FALSE	canonical	3	96	junction_1	9.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47050595	47054745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47051085_47052017_47052130_47052336
ES.36909.6	chrX	+	449	1	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-5	-2701	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47001309	47001758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001300_47001800
ES.36909.8	chrX	+	5048	22	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	-8	-4	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	31.8766756262254	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	False	NA	13	True	AATAAA	-14	NA	47001323	47054741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ES.3691.1	chr10	+	8859	53	NNC	ENSMUSG00000019971.11	novel	8006	53	NA	NA	-97	-398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.75513374334769	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTCTGCATCAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	100323322	100410304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100323400_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.11	chr10	+	7318	51	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	47	1681	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.28	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATTTTTGACTTGCTTG	NA	False	NA	NA	False	CATAAA	-15	NA	100323466	100404802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676
ES.3691.12	chr10	+	8522	53	NNC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	56	3	intron_retention	FALSE	non_canonical	0	0	junction_6	10.0778772302234	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAATTGTTCAGGTTCA	NA	False	NA	NA	False	ATTAAA	-25	NA	100323475	100409520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330211_100330294_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.13	chr10	+	9321	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	57	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCTGTCCTCAGTACCT	NA	False	NA	NA	False	NA	NA	NA	100323476	100410705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.14	chr10	+	8235	54	NNC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	58	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	9.24840147637853	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGGTTCAGGTTCAT	NA	False	NA	NA	False	ATTAAA	-32	NA	100323477	100409527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349422_100349516_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.16	chr10	+	7294	45	NNC	ENSMUSG00000019971.11	novel	7985	52	NA	NA	-1642	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	9.31840354503384	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAATTGTTCAGGTTCA	NA	False	NA	NA	False	ATTAAA	-25	NA	100332550	100409520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387706_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.17	chr10	+	7100	44	NNC	ENSMUSG00000019971.11	novel	7985	52	NA	NA	-1538	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	10.7595782225062	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGGTTCAGGTTCAT	NA	False	NA	NA	False	ATTAAA	-32	NA	100332654	100409527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366084_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.18	chr10	+	6726	34	NNC	ENSMUSG00000019971.11	novel	7985	52	NA	NA	6503	-289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	9.47065449704441	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGCTTCTTGGTCACGA	NA	False	NA	NA	False	NA	NA	NA	100351090	100410413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402880_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.19	chr10	+	4534	27	NNC	ENSMUSG00000019971.11	novel	7985	52	NA	NA	-10432	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	10.3746390826223	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGATTATTTTATATT	NA	False	NA	NA	False	CATAAA	-27	NA	100365883	100409251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379226_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.2	chr10	+	9096	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	-4	-283	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTCACGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	100323415	100410419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.20	chr10	+	4271	26	ISM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	42942	275	-9223	-1	3prime_fragment	FALSE	canonical	3	27	junction_6	7.11617874986288	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTATTTAAAATTGATTA	570	False	NA	NA	False	CATAAA	-18	NA	100367092	100409242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.21	chr10	+	4572	23	NIC	ENSMUSG00000019971.11	novel	7985	52	NA	NA	-3375	3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	10.6328665579734	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAATTGTTCAGGTTCA	6418	False	NA	NA	False	ATTAAA	-25	NA	100372940	100409520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.3	chr10	+	7704	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	1	-211	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTCTCTGTGTTATAG	NA	False	NA	NA	False	AAAAAG	-16	NA	100323420	100409032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.4	chr10	+	8168	53	NNC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	10.7783443580446	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTCATAATTGTTCAG	NA	False	NA	NA	False	ATTAAA	-20	NA	100323420	100409515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353645_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399290_100402872_100403014_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.5	chr10	+	8184	53	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	12	6	combination_of_known_junctions	FALSE	canonical	3	23	junction_17	7.43263633176255	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTCAGGTTCAGGT	NA	False	NA	NA	False	ATTAAA	-28	NA	100323431	100409523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.7	chr10	+	8128	53	NNC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.75513374334769	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTCAGGTTCAG	NA	False	NA	NA	False	ATTAAA	-26	NA	100323436	100409521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_100323566_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.3691.8	chr10	+	9023	52	NIC	ENSMUSG00000019971.11	novel	8211	54	NA	NA	17	-288	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	8.91538247066448	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTTCTTGGTCACGAT	NA	False	NA	NA	False	NA	NA	NA	100323436	100410414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ES.36910.1	chrX	-	508	1	Intergenic	novelGene_30223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47023612	47023104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47023100_47023600
ES.36911.1	chrX	-	257	1	Intergenic	novelGene_30224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAAACTGGACTTTCA	NA	False	NA	NA	False	AATAAA	-8	NA	47031938	47031681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47031700_47031900
ES.36912.1	chrX	-	177	1	Intergenic	novelGene_30225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAATACT	NA	False	NA	NA	False	NA	NA	NA	47068452	47068275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47068300_47068500
ES.36913.1	chrX	-	3212	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-63	0	-63	0	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47123793	47114022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47116585_47117170_47117343_47123315
ES.36913.2	chrX	-	2746	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	-147	550	-147	-550	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTGCCCTTACTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	47123877	47114572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47116585_47117170_47117343_47123315
ES.36914.1	chrX	-	157	1	Intergenic	novelGene_30226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	47170405	47170248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47170200_47170400
ES.36915.1	chrX	+	2970	22	NNC	ENSMUSG00000037005.17	novel	3498	21	NA	NA	-111	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	10.7088875290034	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTGTGGGCAGACTC	NA	False	NA	NA	False	ATTAAA	-27	NA	47197490	47225547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47197615_47197942_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
ES.36915.2	chrX	+	1212	6	NNC	ENSMUSG00000037005.17	novel	3017	20	NA	NA	-69	5377	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.9138143006306	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAATCAAAATGTTT	NA	False	NA	NA	False	ATTAAA	-8	NA	47197532	47206408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205999_47206154
ES.36915.3	chrX	+	3254	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	-67	311	-67	0	multi-exon	FALSE	canonical	3	24	junction_11	7.3109506905737	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTGTGGGCAGACTC	NA	False	NA	NA	False	ATTAAA	-27	NA	47197534	47225547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
ES.36915.4	chrX	+	3231	7	ISM	ENSMUSG00000037005.17	ENSMUST00000114998.8	3017	20	-257	13434	-63	8437	5prime_fragment	FALSE	canonical	3	34	junction_5	7.51480021173033	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTTTGGTTCTAGTTG	NA	False	NA	NA	False	AATAAA	-27	NA	47197538	47209468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211
ES.36915.5	chrX	+	3006	6	NIC	ENSMUSG00000037005.17	novel	3017	20	NA	NA	76	8425	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.8689063071676	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCATACCCAGAGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	47197677	47209456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47198072_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211
ES.36915.6	chrX	+	4150	19	NIC	ENSMUSG00000037005.17	novel	3498	21	NA	NA	91	0	intron_retention	FALSE	canonical	3	24	junction_11	7.60035736651675	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTGTGGGCAGACTC	NA	False	NA	NA	False	ATTAAA	-27	NA	47197692	47225547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47220852_47223961_47224052_47224611
ES.36915.7	chrX	+	1288	1	Intergenic	novelGene_30227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGCTTAGTTCAATA	NA	False	NA	NA	False	AATAAA	-11	NA	47208804	47210092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47208800_47210100
ES.36916.1	chrX	-	2945	1	Antisense	novelGene_ENSMUSG00000037005.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAACAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	47217609	47214664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47214700_47217600
ES.36917.1	chrX	+	2613	8	FSM	ENSMUSG00000031101.7	ENSMUST00000033427.7	2677	8	42	22	42	-22	multi-exon	FALSE	canonical	1	3	junction_3	1.30930734141595	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATAAATAGAACTT	NA	False	NA	NA	False	NA	NA	NA	47235354	47250420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248942
ES.36918.1	chrX	+	3041	1	Intergenic	novelGene_30228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGCATGATATATATACA	NA	False	NA	NA	False	NA	NA	NA	47274525	47277566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47274500_47277600
ES.36919.1	chrX	+	7794	2	Antisense	novelGene_ENSMUSG00000036985.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACAACCCAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	47285246	47293666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_47289717_47290342
ES.3692.1	chr10	-	2446	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	155	-37	-5	37	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATGGTGATCATAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	100425102	100408089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.2	chr10	-	2346	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	150	68	3	-68	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGTCTGATTTTT	NA	False	NA	1	True	AATAAA	-16	NA	100425107	100408194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.3	chr10	-	3291	6	NIC	ENSMUSG00000046567.11	novel	2564	7	NA	NA	0	-69	intron_retention	FALSE	canonical	3	50	junction_4	4.31740662898458	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTGTCTGATTTT	NA	False	NA	0	True	AATAAA	-15	NA	100425097	100408195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_100409623_100411578_100411749_100413022_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.4	chr10	-	4311	6	NIC	ENSMUSG00000046567.11	novel	2564	7	NA	NA	-8	-70	intron_retention	FALSE	canonical	3	50	junction_4	5.23832034148352	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTGTCTGATTT	NA	False	NA	-1	True	AATAAA	-14	NA	100425118	100408196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.5	chr10	-	5253	5	NIC	ENSMUSG00000046567.11	novel	2564	7	NA	NA	6	-70	intron_retention	FALSE	canonical	3	50	junction_3	4.63680924774785	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTTTGTCTGATTT	NA	False	NA	-1	True	AATAAA	-14	NA	100425104	100408196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_100411749_100413022_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.6	chr10	-	2479	8	NNC	ENSMUSG00000046567.11	novel	2564	7	NA	NA	4	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6297363325824	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCTGTTTGTCTGATT	NA	False	NA	-2	True	AATAAA	-13	NA	100425106	100408197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_100409623_100410868_100411006_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.7	chr10	-	1396	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	186	982	26	149	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAAATATGATTTTTT	NA	False	NA	NA	False	CATAAA	-39	NA	100425071	100409108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.3692.9	chr10	-	1120	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	292	1152	62	-21	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATATAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	100424965	100409278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ES.36920.1	chrX	+	205	1	Intergenic	novelGene_30229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATTTTGCTCCCATA	NA	False	NA	NA	False	NA	NA	NA	47298851	47299056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47298900_47299100
ES.36921.1	chrX	-	3046	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	-63	-1	-63	1	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTCCTCCTTCCT	NA	False	NA	-1	True	ATTAAA	-17	NA	47297627	47260844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ES.36921.10	chrX	-	1386	6	FSM	ENSMUSG00000036985.13	ENSMUST00000123054.8	1388	6	-3	5	-3	-5	multi-exon	FALSE	canonical	3	110	junction_1	9.45304183847718	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTGATGTTTTTCAT	NA	False	NA	NA	False	GATAAA	-16	NA	47297545	47270575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ES.36921.2	chrX	-	3740	3	ISM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	28209	0	27850	0	3prime_fragment	FALSE	canonical	3	122	junction_1	7	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47269355	47260845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_47262519_47266916_47267014_47267385
ES.36921.3	chrX	-	3112	10	NIC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	37.8235017409893	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47297337	47260845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47296999
ES.36921.4	chrX	-	3239	11	NNC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-25554	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	49.7253456498796	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47323309	47260845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47306494_47306725_47323074
ES.36921.5	chrX	-	3697	9	NIC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	3	-2	intron_retention	FALSE	canonical	3	110	junction_4	8.95823643358446	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGCCTGCCTCCTCCTT	NA	False	NA	-4	True	ATTAAA	-14	NA	47297532	47260847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ES.36921.6	chrX	-	3990	10	NNC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_7	50.8799118719634	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGCCTGCCTCCTCCTT	NA	False	NA	-4	True	ATTAAA	-14	NA	47297541	47260847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47290928_47291213_47295544_47295835_47297356
ES.36921.8	chrX	-	2966	10	NNC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.9113214545311	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGATGCCTGCCTCCTCC	NA	False	NA	-6	True	ATTAAA	-12	NA	47297572	47260849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297376
ES.36921.9	chrX	-	2931	10	NNC	ENSMUSG00000036985.13	novel	2982	10	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39.1798638128703	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCAAGATGCCTGCCT	NA	False	NA	-11	True	ATTAAA	-7	NA	47297531	47260854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47262519_47266916_47267005_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ES.36922.1	chrX	-	1771	1	Intergenic	novelGene_30230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTCATGACGTTT	NA	False	NA	NA	False	NA	NA	NA	47338760	47336989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47337000_47338800
ES.36923.1	chrX	+	2813	16	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-6481	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	106.04745269087	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTACCTTCTGTATTATC	NA	False	NA	22	True	AATAAA	-26	NA	47339257	47371332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47339298_47345474_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.10	chrX	+	4043	13	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-5	-4	intron_retention	FALSE	canonical	2	4	junction_6	146.701203320067	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345733	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361006_47361060_47361676_47361797_47361898_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.11	chrX	+	3181	13	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	338	junction_6	49.5325370057119	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCGACTACCTTCTG	NA	False	NA	15	True	AATAAA	-19	NA	47345734	47371325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.12	chrX	+	2557	16	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	131.373191921166	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345737	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361006_47361060_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.13	chrX	+	3565	16	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	8	-4	intron_retention	FALSE	canonical	0	0	junction_7	153.98072029388	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345746	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291_47355736_47361006_47361060_47361676_47361797_47361898_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.14	chrX	+	2981	17	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.096641792329	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345757	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291_47355736_47361006_47361060_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.15	chrX	+	4397	13	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_7	151.183915774427	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCGACTACCTTCTG	NA	False	NA	15	True	AATAAA	-19	NA	47345769	47371325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291_47355736_47361676_47361797_47361898_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.16	chrX	+	2064	6	NIC	ENSMUSG00000063785.13	novel	2138	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	166.18616067531	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTTGAGTTCTGTTTT	NA	False	NA	NA	False	GATAAA	-41	NA	47345771	47356846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291
ES.36923.17	chrX	+	2461	15	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	109.671890060251	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345773	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352503_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.18	chrX	+	2422	15	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	107.670794554512	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345773	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345800_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.19	chrX	+	6002	17	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	151.38422504921	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47345773	47371327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47354318_47357799_47361006_47361060_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.2	chrX	+	1848	11	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-31	-5	combination_of_known_splicesites	FALSE	canonical	2	10	junction_7	125.572648295718	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCGACTACCTTCTG	NA	False	NA	15	True	AATAAA	-19	NA	47345707	47371325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.20	chrX	+	2124	7	FSM	ENSMUSG00000063785.13	ENSMUST00000125966.8	2138	7	14	0	-7	0	multi-exon	FALSE	canonical	3	18	junction_6	135.426999605774	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTTGAGTTCTGTTTT	NA	False	NA	NA	False	GATAAA	-41	NA	47345787	47356846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291
ES.36923.21	chrX	+	2447	15	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	341	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.132760426945	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCGACTACCTTCTG	NA	False	NA	15	True	AATAAA	-19	NA	47346135	47371325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47346188_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.22	chrX	+	2401	14	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	1421	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.557186757106	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47347215	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47347297_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.23	chrX	+	177	1	Intergenic	novelGene_30231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47351940	47352117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47351900_47352100
ES.36923.24	chrX	+	1861	10	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	6609	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	132.986029155762	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGACTACCTTCTGTAT	NA	False	NA	18	True	AATAAA	-22	NA	47352403	47371328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366365_47367243_47367438_47367544_47367645_47370938
ES.36923.25	chrX	+	3358	10	NNC	ENSMUSG00000063785.13	novel	2138	7	NA	NA	8468	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.950055184575	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47354262	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47355736_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.26	chrX	+	3608	8	NNC	ENSMUSG00000063785.13	novel	2138	7	NA	NA	9757	0	intron_retention	FALSE	canonical	0	0	junction_1	186.154642758133	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47355551	47371330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47355736_47361006_47361060_47361676_47361797_47361898_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.27	chrX	+	3387	9	ISM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	14436	4	14380	-4	3prime_fragment	FALSE	canonical	3	320	junction_2	58.0689245638319	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47360174	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.28	chrX	+	6504	4	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	14881	-3	intron_retention	FALSE	canonical	3	384	junction_1	54.1869192907497	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGACTACCTTCTGTA	NA	False	NA	17	True	AATAAA	-21	NA	47360675	47371327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.29	chrX	+	5068	1	Genic_Genomic	ENSMUSG00000063785.13	novel	NA	NA	NA	NA	21270	802	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGTGGTATCTGTAC	NA	False	NA	NA	False	NA	NA	NA	47367064	47372132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_47367100_47372100
ES.36923.4	chrX	+	1434	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGACTACCTTCTGTAT	NA	False	NA	18	True	AATAAA	-22	NA	47345726	47371328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
ES.36923.5	chrX	+	3992	12	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	338	junction_6	49.5136678684293	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345731	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.6	chrX	+	4541	14	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	320	junction_8	50.6068498766508	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCGACTACCTTCTG	NA	False	NA	15	True	AATAAA	-19	NA	47345732	47371325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.7	chrX	+	2551	14	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-5	-4	intron_retention	FALSE	canonical	1	4	junction_6	164.227976917354	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	False	NA	16	True	AATAAA	-20	NA	47345733	47371326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361006_47361060_47361676_47361797_47362566_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.8	chrX	+	3621	14	NNC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	-5	-10	intron_retention	FALSE	canonical	0	0	junction_7	143.874493300533	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTATAACTCGACTACC	NA	False	NA	10	True	AATAAA	-14	NA	47345733	47371320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47355291_47355736_47361676_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ES.36923.9	chrX	+	2563	6	ISM	ENSMUSG00000063785.13	ENSMUST00000125966.8	2138	7	-40	2397	-5	-2397	5prime_fragment	FALSE	canonical	3	345	junction_4	29.36256119619	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAGAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	47345733	47354449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353
ES.36924.1	chrX	+	6166	16	NNC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	-49561	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.447868660297	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGTATTGAGGGACTT	NA	False	NA	NA	False	NA	NA	NA	47380673	47495588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47380738_47382126_47382247_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.10	chrX	+	5705	14	FSM	ENSMUSG00000036959.16	ENSMUST00000037596.13	7360	14	-60	1715	-60	-375	multi-exon	FALSE	canonical	2	7	junction_1	7.66996755970088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTAGTGACTGGATTC	NA	False	NA	19	True	NA	NA	NA	47432586	47495211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47432767_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.11	chrX	+	5554	14	NNC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	-27	-370	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	8.08461172509615	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGACTGGATTCCTTTC	NA	False	NA	24	True	NA	NA	NA	47432619	47495216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47432767_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472921_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.12	chrX	+	7478	14	NNC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.65444442376423	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCCGTGTCAGGGCCT	NA	False	NA	4	True	AAAACA	-12	NA	47432657	47496927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47432895_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.13	chrX	+	129	1	Intergenic	novelGene_30233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTCCCTGGCTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	47432805	47432934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47432800_47432900
ES.36924.14	chrX	+	4280	11	NNC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	-123	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.7612784455238	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTATCACTGTGACGAT	NA	False	NA	NA	False	NA	NA	NA	47458021	47495559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47459910_47463899_47464066_47465873_47465959_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.15	chrX	+	3928	11	NNC	ENSMUSG00000036959.16	novel	7360	14	NA	NA	84	-45	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	8.1	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGGTTTCTGATAAGT	NA	False	NA	NA	False	NA	NA	NA	47458228	47495541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472921_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.16	chrX	+	4838	11	ISM	ENSMUSG00000036959.16	ENSMUST00000037596.13	7360	14	26014	166	516	-166	3prime_fragment	FALSE	canonical	3	9	junction_8	6.847627326308	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTTTGTTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	47458660	47496760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.17	chrX	+	656	1	Intergenic	novelGene_30235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47468325	47468981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47468300_47469000
ES.36924.2	chrX	+	5771	16	NNC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	-49538	-373	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.33571398209883	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGTGACTGGATTCCT	NA	False	NA	21	True	NA	NA	NA	47380696	47495213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47380738_47382123_47382247_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.3	chrX	+	6060	15	NNC	ENSMUSG00000036959.16	novel	7446	15	NA	NA	-329	-374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.56716322871613	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTAGTGACTGGATTCC	NA	False	NA	20	True	NA	NA	NA	47429905	47495212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47430361_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480914_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.5	chrX	+	6049	15	NIC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	7	-113	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.55027150780271	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGTCTCCCTGTGCT	NA	False	NA	NA	False	NA	NA	NA	47430944	47495473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47431127_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.7	chrX	+	7469	15	NIC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	59	19	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.55027150780271	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCCTGTCCTCACT	NA	False	NA	22	True	AAAACA	-30	NA	47430996	47496945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47431127_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.8	chrX	+	2380	13	NIC	ENSMUSG00000036959.16	novel	5591	12	NA	NA	63	-371	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	9.9121138007995	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTGACTGGATTCCTTT	NA	False	NA	23	True	NA	NA	NA	47431000	47495215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47431127_47431677_47431758_47450409_47450540_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36924.9	chrX	+	6098	14	FSM	ENSMUSG00000036959.16	ENSMUST00000037596.13	7360	14	-80	1342	-80	-2	multi-exon	FALSE	canonical	2	7	junction_1	7.66996755970088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTGTTGTATTGAGGG	NA	False	NA	NA	False	NA	NA	NA	47432566	47495584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47432767_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ES.36925.1	chrX	-	295	3	Antisense	novelGene_ENSMUSG00002076264.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAACTCACAACAACA	NA	False	NA	NA	False	NA	NA	NA	47465809	47359318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47359345_47425380_47425455_47465614
ES.36925.2	chrX	-	4375	4	Antisense	novelGene_ENSMUSG00000063785.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACCAAAAACTCACAAC	NA	False	NA	NA	False	NA	NA	NA	47365377	47359322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47361795_47362564_47362690_47362774_47362853_47363677
ES.36925.3	chrX	-	3202	1	Antisense	novelGene_ENSMUSG00000063785.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47362558	47359356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47359400_47362600
ES.36925.4	chrX	-	178	1	Intergenic	novelGene_30232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAAAAAAAGATGTT	NA	False	NA	NA	False	NA	NA	NA	47409413	47409235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47409200_47409400
ES.36925.5	chrX	-	214	1	Intergenic	novelGene_30234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47465811	47465597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47465600_47465800
ES.36926.1	chrX	-	6214	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-105	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.0932821814351	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTGTCATTTTTA	NA	False	NA	NA	False	NA	NA	NA	47543151	47499815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513146_47542748
ES.36926.10	chrX	-	6029	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	379	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.7718354022371	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47542667	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542424
ES.36926.11	chrX	-	6008	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-94	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	26.0932821814351	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543140	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513163_47542849
ES.36926.12	chrX	-	5895	8	NIC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-88	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	27.8509150547653	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543134	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47542748
ES.36926.14	chrX	-	6142	10	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-148	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.6486420631149	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGGTGTTCAGATTCC	NA	False	NA	-4	True	NA	NA	NA	47543194	47499928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748_47543034_47543121
ES.36926.15	chrX	-	4525	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-431	1994	-431	-1991	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGATGGATGGATGGA	NA	False	NA	NA	False	NA	NA	NA	47543477	47501916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ES.36926.16	chrX	-	3226	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-355	3217	-355	2395	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGGTCTGTATCTTCA	NA	False	NA	NA	False	NA	NA	NA	47543401	47503139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ES.36926.17	chrX	-	2850	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-373	2382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.8966720342868	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTGTGCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	47543419	47503152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47542748_47543034_47543137
ES.36926.18	chrX	-	2475	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	355	2030	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	25.7718354022371	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAAGCATTTTCATGTG	NA	False	NA	NA	False	TATAAA	-35	NA	47542691	47503504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542424
ES.36926.19	chrX	-	2619	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-117	3586	-117	2026	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTGAAGCATTTTCA	NA	False	NA	NA	False	TATAAA	-31	NA	47543163	47503508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ES.36926.2	chrX	-	7076	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	-988	0	-988	0	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTCAGATTCCAATTGT	NA	False	NA	2	True	NA	NA	NA	47544034	47499922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ES.36926.20	chrX	-	4722	1	Intergenic	novelGene_30236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47529936	47525214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47525200_47529900
ES.36926.21	chrX	-	6215	1	Intergenic	novelGene_30237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAAACCTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	47531580	47525365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47525400_47531600
ES.36926.3	chrX	-	6532	8	NIC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-112	0	intron_retention	FALSE	canonical	3	71	junction_6	5.87280136888413	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGTTCAGATTCCAAT	NA	False	NA	-1	True	NA	NA	NA	47543158	47499925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509753_47512954_47513232_47542748
ES.36926.4	chrX	-	6101	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.0932821814351	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGTTCAGATTCCAAT	NA	False	NA	-1	True	NA	NA	NA	47543148	47499925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513146_47542748
ES.36926.5	chrX	-	6144	10	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-637	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.6486420631149	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47543683	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748_47543034_47543610
ES.36926.6	chrX	-	5914	9	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	-3118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.0932821814351	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47546164	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47546036
ES.36926.7	chrX	-	5493	7	NNC	ENSMUSG00000031103.13	novel	6088	9	NA	NA	33333	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.7937353594118	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47509713	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47504347_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580
ES.36926.9	chrX	-	5994	9	FSM	ENSMUSG00000031103.13	ENSMUST00000033429.9	5847	9	-148	1	-148	-1	multi-exon	FALSE	canonical	1	1	junction_8	25.7718354022371	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTTCAGATTCCAA	NA	False	NA	-2	True	NA	NA	NA	47552157	47499926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47551949
ES.36927.1	chrX	+	258	1	Intergenic	novelGene_30238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAGTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	47560686	47560944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47560700_47560900
ES.36928.1	chrX	-	187	1	Intergenic	novelGene_30239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	47561200	47561013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47561000_47561200
ES.36929.1	chrX	+	179	1	Intergenic	novelGene_30241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	47567915	47568094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47567900_47568100
ES.3693.1	chr10	-	183	1	Intergenic	novelGene_2814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAATAAACT	NA	False	NA	NA	False	NA	NA	NA	100500779	100500596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_100500600_100500800
ES.36930.1	chrX	+	159	2	Intergenic	novelGene_30242	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATAAATCATTTT	NA	False	NA	NA	False	NA	NA	NA	47586499	47624342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47586646_47624329
ES.36930.2	chrX	+	156	1	Intergenic	novelGene_30244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	47597960	47598116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47598000_47598100
ES.36930.3	chrX	+	1170	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	-12	0	-12	0	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	False	NA	6	True	AATAAA	-14	NA	47608149	47619109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47608736_47618525
ES.36930.4	chrX	+	1006	2	NNC	ENSMUSG00000031104.3	novel	1158	2	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	False	NA	6	True	AATAAA	-14	NA	47608307	47619109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47608736_47618531
ES.36931.1	chrX	+	177	1	Intergenic	novelGene_30246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGACAATGA	NA	False	NA	NA	False	NA	NA	NA	47659178	47659355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_47659200_47659400
ES.36932.1	chrX	+	1482	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	44	2	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGACTTTGTCTTCATT	NA	False	NA	16	True	ATTAAA	-19	NA	47712333	47751173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.2	chrX	+	1471	11	NNC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.5747633384279	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	False	NA	12	True	ATTAAA	-15	NA	47712333	47751169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729201_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.3	chrX	+	1382	10	NNC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.6694525354562	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCATTTTGACTTTGTC	NA	False	NA	10	True	ATTAAA	-13	NA	47712619	47751167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740779_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.4	chrX	+	1436	12	NIC	ENSMUSG00000031105.17	novel	1862	13	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	47.4155186089816	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTTGTCTTCATTTA	NA	False	NA	18	True	ATTAAA	-21	NA	47712639	47751175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47712706_47714472_47714518_47717012_47717061_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.5	chrX	+	1311	10	NNC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.3399350192974	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	False	NA	12	True	ATTAAA	-15	NA	47712640	47751169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47712706_47718128_47718223_47719765_47719914_47723658_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.6	chrX	+	1572	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	186	2	-1	0	multi-exon	FALSE	canonical	1	2	junction_2	43.9708994677161	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	False	NA	12	True	ATTAAA	-15	NA	47712640	47751169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.7	chrX	+	1526	10	ISM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	372	-5	-12	5	3prime_fragment	FALSE	canonical	1	2	junction_1	37.7843131601946	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTTGTCTTCATTTAC	NA	False	NA	19	True	ATTAAA	-22	NA	47712826	47751176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.8	chrX	+	1391	10	FSM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	125	0	125	0	multi-exon	FALSE	canonical	3	5	junction_1	36.940726629976	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	False	NA	12	True	ATTAAA	-15	NA	47712963	47751169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47713084_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ES.36932.9	chrX	+	5190	2	ISM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	32032	-4	32032	2	3prime_fragment	FALSE	canonical	3	101	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGACTTTGTCTTCATT	NA	False	NA	16	True	ATTAAA	-19	NA	47744870	47751173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47749647_47750759
ES.36933.10	chrX	-	3464	2	NNC	ENSMUSG00000036932.15	novel	1025	6	NA	NA	3153	0	intron_retention	FALSE	canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47568620	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47567056_47568390
ES.36933.12	chrX	-	2160	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	301.622383490056	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602370	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572134_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.13	chrX	-	2154	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	66	1	66	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602370	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
ES.36933.16	chrX	-	2434	15	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	35	0	intron_retention	FALSE	non_canonical	0	0	junction_7	310.356871609285	527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602268	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574338_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.17	chrX	-	4403	15	NIC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1039	junction_8	67.6816150842174	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602307	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.18	chrX	-	2090	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	301.31942445776	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602292	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569147_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.2	chrX	-	2245	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	-7	-1	-7	1	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTTTTATTTTAAA	NA	False	NA	0	True	ATTAAA	-17	NA	47602447	47563819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.21	chrX	-	3408	15	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	6974	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	407.436360374356	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47595329	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47564066_47564439_47564640_47566576_47566702_47569001_47569145_47570844_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686
ES.36933.23	chrX	-	2053	15	NIC	ENSMUSG00000036932.15	novel	2221	16	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_14	309.250616616283	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47602400	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47602112
ES.36933.26	chrX	-	3366	15	FSM	ENSMUSG00000036932.15	ENSMUST00000143466.8	3364	15	-5	3	-5	-2	multi-exon	FALSE	canonical	3	1039	junction_8	81.8778333362378	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTTGTTTTATTT	NA	False	NA	-4	True	ATTAAA	-13	NA	47602308	47563823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.27	chrX	-	2711	15	NIC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1039	junction_8	83.7546221691309	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTTGTTTTATTT	NA	False	NA	-4	True	ATTAAA	-13	NA	47602301	47563823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.28	chrX	-	3674	12	NIC	ENSMUSG00000036932.15	novel	3364	15	NA	NA	-13384	-2	intron_retention	FALSE	canonical	3	1039	junction_7	90.7815468925175	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGTTGTTTTATTT	NA	False	NA	-4	True	ATTAAA	-13	NA	47588779	47563823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47571688_47572031_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648
ES.36933.29	chrX	-	5282	14	NIC	ENSMUSG00000036932.15	novel	3364	15	NA	NA	17	-4	intron_retention	FALSE	canonical	3	1039	junction_7	72.8157275423022	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTGGTTGTTTTAT	NA	False	NA	-6	True	ATTAAA	-11	NA	47602286	47563825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.3	chrX	-	4014	15	NIC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	26	0	intron_retention	FALSE	canonical	3	1039	junction_8	72.9261927693797	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602277	47563820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.30	chrX	-	177	1	Intergenic	novelGene_30240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTGAGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	47565317	47565140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47565100_47565300
ES.36933.31	chrX	-	174	2	Antisense	novelGene_ENSMUSG00002075412.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTGAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	47758427	47565141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47565192_47758303
ES.36933.32	chrX	-	176	2	Antisense	novelGene_ENSMUSG00002075412.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTGAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	47758427	47565141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_47565175_47758284
ES.36933.33	chrX	-	178	1	Intergenic	novelGene_30243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	47596535	47596357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47596400_47596500
ES.36933.34	chrX	-	4226	1	NIC	ENSMUSG00000036932.15	novel	2221	16	NA	NA	36	-23840	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGTAAACTTAGAGATTT	NA	False	NA	NA	False	AAAAAG	-11	NA	47602400	47598174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47598200_47602400
ES.36933.35	chrX	-	4092	21	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-17	27598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.4995212717196	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACAAACCGGGCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	47683346	47602903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47602937_47630504_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ES.36933.36	chrX	-	3964	20	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	18	27598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.4595648332421	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACAAACCGGGCTGCTCA	NA	False	NA	NA	False	NA	NA	NA	47683311	47602903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47602930_47630498_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
ES.36933.37	chrX	-	179	1	Intergenic	novelGene_30245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTGG	NA	False	NA	NA	False	NA	NA	NA	47619773	47619594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47619600_47619800
ES.36933.38	chrX	-	4304	20	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-138	42	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	17.5929663608489	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGCCTGCTTTGTCTG	NA	False	NA	86	True	NA	NA	NA	47683519	47630459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
ES.36933.39	chrX	-	4088	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	-5	-38	-5	38	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGACTGCCTGCTTTG	NA	False	NA	82	True	NA	NA	NA	47683334	47630463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ES.36933.4	chrX	-	4781	13	NIC	ENSMUSG00000036932.15	novel	3364	15	NA	NA	21	0	intron_retention	FALSE	canonical	3	1039	junction_6	85.8811759868767	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602282	47563820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47571688_47572031_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.41	chrX	-	3935	19	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	20.1286755711078	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCATCATCTAATACGA	NA	False	NA	45	True	AATAAA	-23	NA	47683337	47630500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ES.36933.42	chrX	-	3998	20	NIC	ENSMUSG00000036916.14	novel	4024	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	23.9104979320243	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683251	47630501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683209
ES.36933.43	chrX	-	4077	21	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	34.4605208898531	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683321	47630501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682012_47682072_47682390_47682491_47683240
ES.36933.44	chrX	-	6357	20	NNC	ENSMUSG00000036916.14	novel	4024	20	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_19	24.839651975205	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683267	47630501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47681681_47681935
ES.36933.45	chrX	-	3763	3	ISM	ENSMUSG00000036916.14	ENSMUST00000076635.13	4355	19	46487	1	-1942	0	3prime_fragment	FALSE	canonical	3	69	junction_2	10.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47634523	47630502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_47632167_47632281_47632319_47632461
ES.36933.46	chrX	-	4037	19	NIC	ENSMUSG00000036916.14	novel	3863	18	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.556128285633	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683414	47630502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
ES.36933.47	chrX	-	4321	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	27.0766966227419	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683494	47630502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47682390_47682476_47683240
ES.36933.48	chrX	-	4037	21	NNC	ENSMUSG00000036916.14	novel	4024	20	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.2411952560083	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	42	True	AATAAA	-20	NA	47683261	47630503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47681276_47681312_47683240
ES.36933.5	chrX	-	4734	15	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	28	0	intron_retention	FALSE	canonical	0	0	junction_3	303.272735406295	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602275	47563820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47564066_47564439_47564637_47566576_47567056_47568390_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ES.36933.51	chrX	-	4020	20	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	28.9537791944314	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	42	True	AATAAA	-20	NA	47683340	47630503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
ES.36933.52	chrX	-	4277	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-97	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	26.1914108058348	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTGCATCATCTAATA	NA	False	NA	42	True	AATAAA	-20	NA	47683478	47630503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
ES.36933.53	chrX	-	6344	20	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	1	junction_19	23.7395843905493	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATTGCATCATCTAAT	NA	False	NA	41	True	AATAAA	-19	NA	47683284	47630504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47681681_47681935
ES.36933.56	chrX	-	4001	20	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-30	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	29.7657521322744	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACAGATTGCATCATCT	NA	False	NA	38	True	AATAAA	-16	NA	47683298	47630507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47682390_47682476_47683240
ES.36933.57	chrX	-	3895	19	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-10	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	24.2670329642684	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTACAGATTGCATC	NA	False	NA	34	True	AATAAA	-12	NA	47683278	47630511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47683240
ES.36933.58	chrX	-	4252	2	FSM	ENSMUSG00000036916.14	ENSMUST00000143028.2	832	2	-2297	-1123	-2297	-9	multi-exon	FALSE	canonical	3	90	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTACAGATTGCATC	NA	False	NA	34	True	AATAAA	-12	NA	47634878	47630511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_47632167_47632281
ES.36933.59	chrX	-	3849	19	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	-26	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	28.0400947498443	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTACAGATTGCATC	NA	False	NA	34	True	AATAAA	-12	NA	47683294	47630511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680608_47680639_47683240
ES.36933.60	chrX	-	4144	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	24	-44	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	28.6984320129167	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGAATTATTTTATAA	NA	False	NA	-1	True	AATAAA	-19	NA	47683357	47630546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683209
ES.36933.62	chrX	-	4876	22	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	1	-50	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	29.7035236921125	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTCTTGGGAATTATT	NA	False	NA	-7	True	AATAAA	-13	NA	47683267	47630552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47681276_47681681_47681935_47682476_47683240
ES.36933.63	chrX	-	4048	22	NNC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	5	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	29.8174339117129	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTCTTGGGAATTATT	NA	False	NA	-7	True	AATAAA	-13	NA	47683263	47630552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47681276_47681312_47682390_47682476_47683240
ES.36933.64	chrX	-	3942	20	NNC	ENSMUSG00000036916.14	novel	4024	20	NA	NA	6	-52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.171654462225	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACACTCTTGGGAATTA	NA	False	NA	-9	True	AATAAA	-11	NA	47683262	47630554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661283_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683240
ES.36933.65	chrX	-	174	1	Intergenic	novelGene_30247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47673130	47672956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47673000_47673100
ES.36933.66	chrX	-	179	1	Intergenic	novelGene_30248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTATAGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	47674917	47674738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47674700_47674900
ES.36933.67	chrX	-	173	1	Intergenic	novelGene_30249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	47724649	47724476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47724500_47724600
ES.36933.68	chrX	-	179	1	Intergenic	novelGene_30250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	47758430	47758251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_47758300_47758400
ES.36933.7	chrX	-	3583	5	NIC	ENSMUSG00000036932.15	novel	3364	15	NA	NA	-589	0	intron_retention	FALSE	canonical	3	1078	junction_4	105.871089065901	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47572362	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47571688_47572031
ES.36933.9	chrX	-	4953	15	ISM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	6789	1	6656	0	3prime_fragment	FALSE	canonical	3	37	junction_14	302.074663023591	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47595647	47563821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459
ES.36934.1	chrX	+	1800	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	-21	-32	-21	32	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACGATTTTCTTGTAT	NA	False	NA	NA	False	NA	NA	NA	47783859	47799632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ES.36934.2	chrX	+	3647	5	NIC	ENSMUSG00000031107.7	novel	1747	6	NA	NA	57	-8	intron_retention	FALSE	canonical	3	254	junction_1	56.5707521604583	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCGGGGCATTTGG	NA	False	NA	NA	False	NA	NA	NA	47783937	47799592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47783998_47784196_47786330_47795181_47795312_47797766_47797951_47798452
ES.36934.3	chrX	+	1109	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	65	573	65	-573	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTCAATCCCTTACC	NA	False	NA	NA	False	TATAAA	-13	NA	47783945	47799027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ES.36934.4	chrX	+	1659	6	NNC	ENSMUSG00000031107.7	novel	1747	6	NA	NA	76	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	142.505298147122	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCGGGGCATTTGGTCC	NA	False	NA	NA	False	NA	NA	NA	47783956	47799595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797773_47797951_47798452
ES.36934.5	chrX	+	1681	5	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	257	8	257	-8	3prime_fragment	FALSE	canonical	3	347	junction_4	19.8053023203384	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCGGGGCATTTGG	NA	False	NA	NA	False	NA	NA	NA	47784137	47799592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ES.36934.6	chrX	+	4683	3	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	8072	8	-3104	-8	3prime_fragment	FALSE	canonical	3	347	junction_2	21.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCGGGGCATTTGG	NA	False	NA	NA	False	NA	NA	NA	47791952	47799592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_47795312_47797766_47797951_47798452
ES.36934.7	chrX	+	3782	1	NIC	ENSMUSG00000031107.7	novel	1747	6	NA	NA	762	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47795818	47799600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_47795800_47799600
ES.36935.1	chrX	-	2179	21	NNC	ENSMUSG00000079606.2	novel	2122	21	NA	NA	-52	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.33398800339676	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATTCCTGGCATTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	47966642	47930334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_47930518_47931665_47931712_47933207_47933309_47933523_47933596_47934354_47934424_47935111_47935184_47942295_47942368_47943118_47943191_47943943_47944019_47944848_47944921_47945500_47945573_47946351_47946418_47947147_47947217_47961723_47961842_47962307_47962419_47963043_47963186_47964080_47964221_47964535_47964626_47965095_47965258_47965864_47965991_47966393
ES.36935.2	chrX	-	1033	3	NIC	ENSMUSG00000079606.2	novel	2122	21	NA	NA	-54	-34259	intron_retention	FALSE	canonical	3	6	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATACAGACAATATCT	NA	False	NA	NA	False	ATTAAA	-8	NA	47966644	47964601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_47965258_47965864_47965991_47966393
ES.36936.1	chrX	+	8918	1	Antisense	novelGene_ENSMUSG00000031109.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAAAGTGGC	1482	False	NA	NA	False	AAAACA	-14	NA	48148036	48156954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_48148000_48157000
ES.36937.1	chrX	+	1744	1	Intergenic	novelGene_30253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGCTACATTGCTAA	NA	False	NA	NA	False	NA	NA	NA	48165637	48167381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_48165600_48167400
ES.36938.1	chrX	+	4351	1	Intergenic	novelGene_30254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGCACTGGTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	48319068	48323419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_48319100_48323400
ES.36939.1	chrX	-	3875	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-20	-629	-3	-122	multi-exon	TRUE	canonical	3	25	junction_4	10.7695042700313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCAGAGGCTCCTAAAG	NA	False	NA	NA	False	AATAAA	-31	NA	48377139	48098705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.10	chrX	-	2981	15	NIC	ENSMUSG00000031109.17	novel	3226	16	NA	NA	2	-57	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	15.5688071187885	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGACTGGGCTGTGAGG	NA	False	NA	-12	True	AATAAA	-1	NA	48377087	48099391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.11	chrX	-	3093	15	FSM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	-1	75	-1	-75	multi-exon	FALSE	canonical	2	12	junction_13	14.647560220329	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAATGAATAAATG	NA	False	NA	-30	True	NA	NA	NA	48377120	48099409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ES.36939.12	chrX	-	2746	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	0	480	0	79	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACTGTGAACCAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	48377119	48099814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.13	chrX	-	2234	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-1	993	-1	-434	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGATGTGAGTTTTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	48377120	48100327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.14	chrX	-	1926	12	NNC	ENSMUSG00000031109.17	novel	636	5	NA	NA	12	-13557	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	18.2362820627198	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGAGTAAGAGGAGAAAT	NA	False	NA	NA	False	NA	NA	NA	48377107	48113450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_48113705_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ES.36939.15	chrX	-	1947	12	NNC	ENSMUSG00000031109.17	novel	636	5	NA	NA	0	-13559	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	15.7988387479942	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTGAGTAAGAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	48377119	48113452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_48113705_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.16	chrX	-	2792	1	Intergenic	novelGene_30251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTACTTATTTCCCTA	8906	False	NA	NA	False	AATAAA	-16	NA	48139020	48136228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_48136200_48139000
ES.36939.17	chrX	-	1802	5	ISM	ENSMUSG00000031109.17	ENSMUST00000114911.8	2623	16	6	57436	6	1302	5prime_fragment	FALSE	canonical	2	12	junction_3	17.6263297370723	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTTTCATCTCTTT	NA	False	NA	NA	False	AGTAAA	-7	NA	48377113	48157329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ES.36939.18	chrX	-	3298	1	Intergenic	novelGene_30252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGCCTCAGGAGAGA	8940	False	NA	NA	False	NA	NA	NA	48164410	48161112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_48161100_48164400
ES.36939.2	chrX	-	3805	15	NIC	ENSMUSG00000031109.17	novel	3226	16	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	12.2975441384341	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTCAGAGGCTCCTAA	NA	False	NA	NA	False	AATAAA	-29	NA	48377119	48098707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.3	chrX	-	3742	15	NNC	ENSMUSG00000031109.17	novel	3226	16	NA	NA	6	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.7442508192648	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTTCAGTCTCAGAGGC	NA	False	NA	NA	False	AATAAA	-23	NA	48377113	48098713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257508_48257662_48375721_48375782_48376977
ES.36939.4	chrX	-	3590	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-13	-351	4	351	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTGTTCCGTTTTGAA	NA	False	NA	NA	False	TATAAA	-20	NA	48377132	48098983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.5	chrX	-	3560	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114914.8	3936	16	-24	400	6	351	multi-exon	FALSE	canonical	2	12	junction_14	13.255774423079	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTGTTCCGTTTTGAA	NA	False	NA	NA	False	TATAAA	-20	NA	48377113	48098983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ES.36939.6	chrX	-	3191	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114914.8	3936	16	-50	795	-3	-44	multi-exon	FALSE	canonical	2	12	junction_14	13.255774423079	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTTCCTGCAGATG	NA	False	NA	1	True	AATAAA	-14	NA	48377139	48099378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ES.36939.7	chrX	-	3201	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	-20	45	-3	-45	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGGCTTCCTGCAGAT	NA	False	NA	0	True	AATAAA	-13	NA	48377139	48099379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ES.36939.8	chrX	-	3128	15	NNC	ENSMUSG00000031109.17	novel	3167	15	NA	NA	-3	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	16.6433169770932	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGGGCTGTGAGGCT	NA	False	NA	-10	True	AATAAA	-3	NA	48377122	48099389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375719_48375782_48376977
ES.36939.9	chrX	-	3306	17	NNC	ENSMUSG00000031109.17	novel	2623	16	NA	NA	8	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	19.7290236707243	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGGGCTGTGAGGCT	NA	False	NA	-10	True	AATAAA	-3	NA	48377128	48099389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48112003_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48374843_48375014_48375732_48375782_48376977
ES.3694.1	chr10	-	119	1	Intergenic	novelGene_2815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	101508300	101508181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_101508200_101508300
ES.36940.1	chrX	+	715	1	FSM	ENSMUSG00000082192.3	ENSMUST00000121891.3	340	1	-124	-251	-124	251	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAGGGCAATCTG	NA	False	NA	NA	False	NA	NA	NA	48749712	48750427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_48749700_48750400
ES.36940.2	chrX	+	616	2	Genic_Genomic	ENSMUSG00000082192.3	novel	340	1	NA	NA	-121	233	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	48749715	48750409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_48749892_48749969
ES.36941.1	chrX	-	157	1	Intergenic	novelGene_30255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48753042	48752885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_48752900_48753000
ES.36942.1	chrX	-	4415	20	FSM	ENSMUSG00000031111.17	ENSMUST00000033442.14	4421	20	1	5	1	-5	multi-exon	FALSE	canonical	0	0	junction_6	2.03569259008565	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACCATGGTAGTGGTCT	NA	False	NA	NA	False	AATAAA	-27	NA	48886625	48871417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
ES.36942.2	chrX	-	4757	19	NIC	ENSMUSG00000031111.17	novel	4421	20	NA	NA	5	-8	intron_retention	FALSE	canonical	0	0	junction_6	2.08758824756177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCATGGTAGTGG	NA	False	NA	NA	False	AATAAA	-24	NA	48886621	48871420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48884027_48884155_48884285_48886529
ES.36942.3	chrX	-	2653	14	NIC	ENSMUSG00000031111.17	novel	2515	13	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.88736063790543	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACATTTGTTGTATTTG	NA	False	NA	NA	False	AATAAA	-27	NA	48886623	48875222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_48875430_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
ES.36942.4	chrX	-	1759	5	FSM	ENSMUSG00000031111.17	ENSMUST00000114891.2	1761	5	1	1	1	-1	multi-exon	FALSE	canonical	2	4	junction_2	1.08972473588517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATATAGCTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	48886625	48881843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
ES.36942.5	chrX	-	2060	4	NIC	ENSMUSG00000031111.17	novel	1761	5	NA	NA	35	-1	intron_retention	FALSE	canonical	2	5	junction_2	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATATAGCTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	48886577	48881843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_48883069_48883368_48884027_48884155_48884285_48886529
ES.36943.1	chrX	-	157	1	Intergenic	novelGene_30256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	49578530	49578373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_49578400_49578500
ES.36944.1	chrX	+	411	3	Antisense	novelGene_ENSMUSG00000083112.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGTTGTCCTGGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	49626218	49651475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_49626314_49638412_49638547_49651293
ES.36944.2	chrX	+	3399	1	Antisense	novelGene_ENSMUSG00000085396.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTCTCTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	49646680	49650079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_49646700_49650100
ES.36945.1	chrX	+	1273	1	Intergenic	novelGene_30257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAGAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	49677830	49679103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_49677800_49679100
ES.36946.1	chrX	-	4150	7	NNC	ENSMUSG00000085396.8	novel	1754	5	NA	NA	357	-1	intron_retention	FALSE	canonical	0	0	junction_2	42.1956422183882	258	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTTCGTAAATTATTG	NA	False	NA	-1	True	AATAAA	-23	NA	49658719	49644621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49649685_49649884_49650512_49650675_49651556_49651832_49653689_49653845_49656416_49656571_49658153
ES.36946.11	chrX	-	2780	6	NIC	ENSMUSG00000085396.8	novel	1754	5	NA	NA	381	-1178	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	27.4852687816583	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGTGTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	49658695	49645805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49647262_49649685_49649884_49651556_49651832_49653689_49653845_49656416_49656571_49658153
ES.36946.12	chrX	-	3103	10	NNC	ENSMUSG00000085396.8	novel	3850	12	NA	NA	-10417	611	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	30.731814857643	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGTACTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	49669493	49646403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49649685_49649884_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662022_49662100_49662229_49666747_49666902_49669457
ES.36946.13	chrX	-	4185	18	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	-11553	607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.6628582621169	250	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTATTTTGTACTTGT	NA	False	NA	NA	False	NA	NA	NA	49692389	49646407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49658549_49659018_49659169_49661891_49662022_49662100_49662229_49666747_49666902_49669269_49669827_49670279_49670434_49673555_49673725_49680801_49680963_49684337_49684493_49685306_49685449_49687010_49687166_49689620_49689776_49692247
ES.36946.14	chrX	-	6040	26	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	1	597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.0346242600094	278	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACAGTTACTTATT	NA	False	NA	NA	False	NA	NA	NA	49724197	49646417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662019_49662100_49662229_49666747_49666902_49669457_49669827_49670279_49670724_49672981_49673135_49684337_49684493_49685306_49685449_49687010_49687166_49689620_49689776_49692247_49692403_49694884_49695040_49697347_49697437_49697563_49697692_49701581_49701728_49704237_49704393_49709551_49709682_49715313_49715387_49716083_49716187_49719767_49719873_49723821
ES.36946.15	chrX	-	2982	13	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	37.8670004386698	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGGAAACCGAAAATTTA	NA	False	NA	NA	False	TATAAA	-14	NA	49680964	49647014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662022_49662100_49662229_49666747_49666902_49669457_49669641_49669771_49669827_49670279_49670434_49673555_49673725_49680801
ES.36946.16	chrX	-	3111	1	NIC	ENSMUSG00000085396.8	novel	884	5	NA	NA	-747	-318	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGAACTGTGGTCGT	NA	False	NA	NA	False	NA	NA	NA	49650652	49647541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49647500_49650700
ES.36946.17	chrX	-	2112	4	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	29	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.9648399931579	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAGATTGGAAAGGTA	NA	False	NA	-5	True	AATAAA	-22	NA	49659047	49651997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49653845_49656416_49656571_49658153_49658236_49659018
ES.36946.19	chrX	-	6217	1	NIC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATGTGAAGATTGGAAA	NA	False	NA	-9	True	AATAAA	-18	NA	49658218	49652001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49652000_49658200
ES.36946.2	chrX	-	5361	13	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	-3590	-2	intron_retention	FALSE	canonical	0	0	junction_10	35.1863096798867	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCATTTCGTAAATTATT	NA	False	NA	-2	True	AATAAA	-22	NA	49684426	49644622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662019_49662100_49662229_49666747_49666902_49669689_49669827_49670279_49670434_49673551_49673725_49680801_49680963_49684337
ES.36946.20	chrX	-	3681	2	ISM	ENSMUSG00000085396.8	ENSMUST00000204991.3	1754	5	817	4992	817	-5	intron_retention	FALSE	canonical	3	87	junction_1	0	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTTGATGTGAAGATT	NA	False	NA	-14	True	AATAAA	-13	NA	49658259	49652006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_49653845_49656416
ES.36946.21	chrX	-	3447	7	NIC	ENSMUSG00000085396.8	novel	3850	12	NA	NA	-10412	-5	combination_of_known_junctions	FALSE	canonical	3	52	junction_6	24.8422802674974	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCTTGATGTGAAGATT	NA	False	NA	-14	True	AATAAA	-13	NA	49669488	49652006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49653845_49656416_49656571_49658153_49659169_49661891_49662019_49662100_49662229_49666747_49666902_49669457
ES.36946.22	chrX	-	2371	4	ISM	ENSMUSG00000085396.8	ENSMUST00000204974.3	3850	12	18822	4229	-2938	-764	internal_fragment	FALSE	canonical	3	74	junction_3	17.1075032271418	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTGAACTTTGCCTGTCC	NA	False	NA	NA	False	AATATA	-20	NA	49662014	49652765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_49653845_49656416_49656571_49658153_49659169_49661891
ES.36946.23	chrX	-	818	1	NIC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	-10529	-16786	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGTGTCAGTTTTAC	NA	False	NA	NA	False	CATAAA	-14	NA	49669605	49668787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49668800_49669600
ES.36946.24	chrX	-	1761	1	Intergenic	novelGene_30258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCTGTAAGCTGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	49680646	49678885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_49678900_49680600
ES.36946.25	chrX	-	2291	3	NIC	ENSMUSG00000085396.8	novel	720	5	NA	NA	-14	-8888	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.5	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAACAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	49723957	49713275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49715387_49716083_49716128_49723821
ES.36946.26	chrX	-	7360	1	NIC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	3308	-8888	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAACAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	49720635	49713275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49713300_49720600
ES.36946.27	chrX	-	6961	2	NIC	ENSMUSG00000085396.8	novel	715	5	NA	NA	-4	-8895	intron_retention	FALSE	canonical	3	63	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	49724192	49713282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49719873_49723821
ES.36946.28	chrX	-	2732	5	NNC	ENSMUSG00000085396.8	novel	715	5	NA	NA	1	-8959	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	14.5859521458148	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49724197	49713346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49715387_49716083_49716187_49719767_49719873_49720299_49720408_49723821
ES.36946.29	chrX	-	2592	4	ISM	ENSMUSG00000085396.8	ENSMUST00000136518.8	715	5	23	9021	15	-8959	5prime_fragment	FALSE	canonical	3	33	junction_2	13.29995822884	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49724165	49713346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_49715387_49716083_49716187_49719767_49719873_49723821
ES.36946.3	chrX	-	1989	8	NNC	ENSMUSG00000085396.8	novel	3850	12	NA	NA	-7683	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	35.7987572467001	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCATTTCGTAAAT	NA	False	NA	-6	True	AATAAA	-18	NA	49666759	49644626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49644807_49647107_49647262_49649685_49649884_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659001_49666733
ES.36946.30	chrX	-	2256	3	NNC	ENSMUSG00000085396.8	novel	720	5	NA	NA	5	-8959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49724175	49713346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49715387_49716083_49716128_49724003
ES.36946.31	chrX	-	3185	2	ISM	ENSMUSG00000085396.8	ENSMUST00000148530.3	716	6	6952	8959	6715	-8959	internal_fragment	FALSE	canonical	3	37	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49717228	49713346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_49715387_49716083
ES.36946.32	chrX	-	2611	5	NNC	ENSMUSG00000085396.8	novel	720	5	NA	NA	3	-8959	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	12.7744862910412	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49724135	49713346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49715387_49716083_49716128_49719767_49719873_49720299_49720408_49723821
ES.36946.33	chrX	-	2671	1	Intergenic	novelGene_30259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGGTACCATTTAAAAACA	NA	False	NA	NA	False	AAAACA	-44	NA	49719677	49717006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_49717000_49719700
ES.36946.4	chrX	-	6700	26	NNC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	15	0	intron_retention	FALSE	canonical	2	4	junction_5	37.2331894953951	289	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGTCATTTCGTAAA	NA	False	NA	-7	True	AATAAA	-17	NA	49724165	49644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49658236_49661891_49662022_49662100_49662229_49666747_49666902_49669457_49669827_49670279_49670434_49673555_49673725_49680801_49680963_49684337_49684493_49687010_49687166_49689620_49689776_49692247_49692403_49694884_49695040_49695839_49695982_49697347_49697485_49697563_49697692_49701581_49701728_49704237_49704393_49709551_49709682_49715313_49715387_49719767_49719873_49723821
ES.36946.5	chrX	-	4592	1	NIC	ENSMUSG00000085396.8	novel	884	5	NA	NA	686	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGTCATTTCGTAAA	NA	False	NA	-7	True	AATAAA	-17	NA	49649219	49644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49644600_49649200
ES.36946.6	chrX	-	5455	12	NIC	ENSMUSG00000085396.8	novel	5555	20	NA	NA	-86	0	intron_retention	FALSE	canonical	3	13	junction_1	28.7157629416722	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGTCATTTCGTAAA	NA	False	NA	-7	True	AATAAA	-17	NA	49680922	49644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49647262_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662019_49662100_49662229_49666747_49666902_49669457_49669827_49670279_49670434_49673555_49673725_49680801
ES.36946.8	chrX	-	5190	11	NNC	ENSMUSG00000085396.8	novel	3850	12	NA	NA	-10649	0	intron_retention	FALSE	canonical	3	17	junction_10	30.9412346230722	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAGTCATTTCGTAAA	NA	False	NA	-7	True	AATAAA	-17	NA	49669725	49644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49649685_49649884_49651556_49651832_49653689_49653845_49656416_49656571_49658153_49659169_49661891_49662019_49662100_49662229_49666747_49666902_49669215_49669298_49669457
ES.36946.9	chrX	-	3945	7	NNC	ENSMUSG00000085396.8	novel	1754	5	NA	NA	462	-1	intron_retention	FALSE	canonical	1	1	junction_6	31.0881363581386	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGAGTCATTTCGTAA	NA	False	NA	-8	True	AATAAA	-16	NA	49658614	49644628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49647262_49649685_49649884_49651556_49651832_49653689_49653845_49656416_49656571_49657387_49657457_49658153
ES.36947.1	chrX	+	3516	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	127	-4	127	4	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGATGTTTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	49930050	49981978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ES.36947.2	chrX	+	1956	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	316	1367	-78	-118	multi-exon	FALSE	canonical	3	20	junction_11	5.29618605950164	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGCTTCAAAAAGCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	49930239	49980607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ES.36947.3	chrX	+	3032	11	NIC	ENSMUSG00000031112.11	novel	3639	12	NA	NA	-15	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.94786409235671	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGATGTTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	49930302	49981977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_49930424_49930555_49930713_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ES.36947.4	chrX	+	4259	12	NIC	ENSMUSG00000031112.11	novel	3639	12	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	8.73862897505303	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGATGTTTGTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	49930317	49981977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49973454_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ES.36948.1	chrX	-	5959	7	NIC	ENSMUSG00000036131.13	novel	2063	11	NA	NA	32521	2533	intron_retention	FALSE	canonical	1	1	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAATGTCTTTCCTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	49999066	49981523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_49985119_49986126_49986203_49986320_49986390_49987600_49987765_49989202_49990704_49990871_49990987_49998627
ES.36948.2	chrX	-	3214	13	NNC	ENSMUSG00000036131.13	novel	2112	12	NA	NA	-3477	765	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.986013297183269	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGTTATGAATATG	NA	False	NA	NA	False	AATAAA	-21	NA	50035064	49983291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_49985119_49986126_49986203_49986320_49986390_49987600_49987765_49989202_49989299_49990555_49990704_49990871_49990987_49998627_49998726_50001456_50001536_50004222_50004266_50005054_50005160_50031530_50031876_50035015
ES.36949.1	chrX	-	3810	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-752	-372	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTTAATTATTTC	NA	False	NA	1	True	AATAAA	-23	NA	50107647	50093160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
ES.36949.10	chrX	-	3139	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-748	-1039	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCAACGCTCCTTCAG	NA	False	NA	NA	False	AATAAA	-24	NA	50107643	50093827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
ES.36949.11	chrX	-	2995	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-752	-1187	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGTGTTGCATTTGATT	NA	False	NA	-4	True	ATTAAA	-19	NA	50107647	50093975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
ES.36949.2	chrX	-	3821	5	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-707	-376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.1377015032175	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCTCTTTAATTA	NA	False	NA	-3	True	AATAAA	-19	NA	50107602	50093164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103645_50103706_50103847_50104161_50106502_50107328_50107442
ES.36949.3	chrX	-	3707	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-2077	-376	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.0163372525573	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCTCTTTAATTA	NA	False	NA	-3	True	AATAAA	-19	NA	50108972	50093164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50108866
ES.36949.4	chrX	-	3850	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-870	-378	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.4867836331703	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTTGTCTCTTTAAT	NA	False	NA	-5	True	AATAAA	-17	NA	50107765	50093166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107542_50107728
ES.36949.5	chrX	-	5536	2	ISM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	-27	378	-27	-378	intron_retention	FALSE	canonical	3	105	junction_1	0	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTTGTCTCTTTAAT	NA	False	NA	-5	True	AATAAA	-17	NA	50106922	50093166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_50095628_50103847
ES.36949.6	chrX	-	3315	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-747	-379	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.4867836331703	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGGCTTGTCTCTTTAA	NA	False	NA	-6	True	AATAAA	-16	NA	50107642	50093167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50107013_50107610
ES.36949.7	chrX	-	5199	1	NIC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	8527	-381	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGAGGCTTGTCTCTTT	NA	False	NA	-8	True	AATAAA	-14	NA	50098368	50093169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_50093200_50098400
ES.36949.9	chrX	-	3090	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-660	-382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.4867836331703	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGAGGCTTGTCTCTT	NA	False	NA	-9	True	AATAAA	-13	NA	50107555	50093170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50095628_50103847_50104161_50106502_50106710_50107442
ES.3695.1	chr10	+	234	1	Intergenic	novelGene_2816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAATTAAATATAAA	7455	False	NA	NA	False	NA	NA	NA	101689320	101689554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_101689300_101689600
ES.36950.1	chrX	+	1033	1	Intergenic	novelGene_30260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTCTCACACATTCGC	NA	False	NA	NA	False	NA	NA	NA	50203975	50205008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_50204000_50205000
ES.36951.1	chrX	+	2409	8	Antisense	novelGene_ENSMUSG00000036109.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGCGCTGCGCTAG	NA	False	NA	NA	False	NA	NA	NA	50208709	50293682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_50209896_50212693_50212789_50217797_50217949_50218980_50219217_50220303_50220500_50228080_50228249_50253294_50253543_50293553
ES.36951.2	chrX	+	203	1	Intergenic	novelGene_30262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGCTCTGCTTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	50274854	50275057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_50274900_50275100
ES.36951.3	chrX	+	2492	1	Intergenic	novelGene_30264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGCGCTGCGCTAG	NA	False	NA	NA	False	NA	NA	NA	50291190	50293682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_50291200_50293700
ES.36951.4	chrX	+	2137	1	Intergenic	novelGene_30263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGTGGGGGTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	50291190	50293327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_50291200_50293300
ES.36952.1	chrX	-	8658	8	NNC	ENSMUSG00000036109.18	novel	2243	8	NA	NA	219	3769	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	8.22638859936455	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATGTCTTCTTTTATG	NA	False	NA	-5	True	AATAAA	-15	NA	50294490	50202376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294438
ES.36952.2	chrX	-	3701	8	NNC	ENSMUSG00000036109.18	novel	2243	8	NA	NA	77	-1269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.59166304662544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTGGTGCAACATACT	NA	False	NA	NA	False	AATAAA	-15	NA	50294632	50207414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294499
ES.36952.3	chrX	-	1974	8	FSM	ENSMUSG00000036109.18	ENSMUST00000114876.9	2243	8	-25	294	-25	78	multi-exon	FALSE	canonical	3	6	junction_7	7.54848275064166	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATGTGACTGAAAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	50294892	50209250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294650
ES.36952.4	chrX	-	1585	7	FSM	ENSMUSG00000036109.18	ENSMUST00000114875.8	4649	7	-109	3173	49	10	multi-exon	FALSE	canonical	0	0	junction_6	9.88966913276453	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATAGTGTTTTCTTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	50294818	50209318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50294650
ES.36952.5	chrX	-	916	5	ISM	ENSMUSG00000036109.18	ENSMUST00000041495.14	1803	7	14971	522	-4074	-113	3prime_fragment	FALSE	canonical	3	24	junction_4	1.80277563773199	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATACTCTTGGTGGAT	NA	False	NA	NA	False	AATAAA	-28	NA	50220321	50209478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305
ES.36952.6	chrX	-	4710	1	Intergenic	novelGene_30261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	50240461	50235751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_50235800_50240500
ES.36953.1	chrX	-	3729	4	NNC	ENSMUSG00000062184.12	novel	4318	5	NA	NA	91	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGTGAGTAATCTCATG	NA	False	NA	NA	False	AATAAA	-12	NA	50770134	50476089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50479304_50608631_50608700_50768921_50769286_50770051
ES.36954.1	chrX	+	7594	1	Antisense	novelGene_ENSMUSG00000055780.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAGAAAAGAAAAAG	6500	False	NA	NA	False	NA	NA	NA	50847941	50855535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_50847900_50855500
ES.36955.1	chrX	-	6957	8	NNC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	62	2878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.85403677770316	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889959	50839957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886609_50886704_50887371_50887462_50889689_50889806_50889878
ES.36955.10	chrX	-	6056	8	NNC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	66	2012	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	8.49969987465344	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	50889955	50840823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886609_50886704_50887371_50887431_50889689_50889806_50889878
ES.36955.11	chrX	-	177	1	Intergenic	novelGene_30265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	50847830	50847653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_50847700_50847800
ES.36955.12	chrX	-	3324	1	NIC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	60	-43802	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACTGCAAGAGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	50889961	50886637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_50886600_50890000
ES.36955.2	chrX	-	6936	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	62	-2878	62	2878	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889959	50839957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
ES.36955.4	chrX	-	7031	9	NNC	ENSMUSG00000055780.11	novel	4133	9	NA	NA	66	2878	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	8.24526379202024	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889955	50839957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50887774_50887874_50889689_50889806_50889878
ES.36955.5	chrX	-	6727	6	NNC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	275	2878	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	9.65401470891774	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889746	50839957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886609_50886704_50889689
ES.36955.6	chrX	-	6923	8	NNC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	65	2878	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	8.49969987465344	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGACTCAATAGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	50889956	50839957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886609_50886704_50887371_50887431_50889689_50889806_50889878
ES.36955.7	chrX	-	6926	8	NNC	ENSMUSG00000055780.11	novel	4120	8	NA	NA	62	2858	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.75750407085377	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATATTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	50889959	50839977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889816_50889878
ES.36955.8	chrX	-	6162	9	NNC	ENSMUSG00000055780.11	novel	4133	9	NA	NA	62	2071	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.2217598778293	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCTTTTAGCGAAGT	NA	False	NA	NA	False	NA	NA	NA	50889959	50840764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_50846351_50854031_50854113_50882016_50882050_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
ES.36955.9	chrX	-	6168	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	5	-2053	5	2053	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACAAACAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	50890016	50840782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
ES.36956.1	chrX	-	5180	2	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-25	2732	intron_retention	FALSE	canonical	3	81	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCAAGTGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	51061674	51054839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51059953_51061607
ES.36956.2	chrX	-	4109	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	3	2730	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGAGCAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	51061646	51054841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
ES.36956.3	chrX	-	4390	2	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-11	1956	intron_retention	FALSE	canonical	3	81	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTATGGACAATTT	NA	False	NA	NA	False	NA	NA	NA	51061660	51055615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51059953_51061607
ES.36956.4	chrX	-	4055	3	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-24	1953	intron_retention	FALSE	canonical	3	81	junction_2	1	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTGGCTTATGGACAA	NA	False	NA	NA	False	NA	NA	NA	51061673	51055618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51058747_51059091_51059953_51061607
ES.36956.5	chrX	-	1453	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-21	50	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTATGTCTAATTTCTA	NA	False	NA	48	True	TATAAA	-11	NA	51061670	51057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
ES.36956.6	chrX	-	2420	2	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	2	-1	intron_retention	FALSE	canonical	3	81	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGTTGCTCCGTTTC	NA	False	NA	-3	True	CATAAA	-16	NA	51061647	51057572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51059953_51061607
ES.36956.7	chrX	-	1592	5	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	37.6322667401261	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTGTTGCTCCGTTTC	NA	False	NA	-3	True	CATAAA	-16	NA	51061671	51057572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_51058747_51059091_51059163_51059359_51059477_51059786_51059953_51061607
ES.36957.1	chrX	+	175	1	Intergenic	novelGene_30268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAACACATATTA	NA	False	NA	NA	False	NA	NA	NA	51222437	51222612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51222400_51222600
ES.36958.1	chrX	-	5538	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-240	-2647	-240	2647	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTACTTCCCGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	51254369	51139250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.10	chrX	-	2575	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-300	376	-300	-376	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGGCCACTGGT	NA	False	NA	77	True	AATGAA	-20	NA	51254429	51142273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.11	chrX	-	1817	10	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-70	-453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.829334520848	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTCTCACTTTTTTT	NA	False	NA	0	True	AGTAAA	-29	NA	51254199	51142350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492_51253682_51254132
ES.36958.12	chrX	-	2151	8	ISM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-240	830	-240	-830	5prime_fragment	FALSE	canonical	3	220	junction_4	20.9245486138621	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGGAAATGACGTGGA	NA	False	NA	NA	False	AGTAAA	-13	NA	51254369	51142727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.13	chrX	-	5703	1	Intergenic	novelGene_30266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51170754	51165051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51165100_51170800
ES.36958.14	chrX	-	3155	1	Intergenic	novelGene_30267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCATT	NA	False	NA	NA	False	NA	NA	NA	51175830	51172675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51172700_51175800
ES.36958.15	chrX	-	3031	2	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-273	-107357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTTATGCAGTTGA	NA	False	NA	NA	False	AAAAAG	-15	NA	51254402	51249254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51251376_51253492
ES.36958.2	chrX	-	4908	9	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-2248	2647	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.8872068830372	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTACTTCCCGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	51256377	51139250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51256130
ES.36958.3	chrX	-	5026	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-239	-2136	-239	2136	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTGGACAACTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	51254368	51139761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.4	chrX	-	4397	9	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-2251	2133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.8872068830372	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCTGACTGGACAACT	NA	False	NA	-7	True	AATAAA	-21	NA	51256380	51139764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51256130
ES.36958.5	chrX	-	4949	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-283	-2015	-283	2015	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTGATTTGTTTTCTT	NA	False	NA	-6	True	ATTAAA	-24	NA	51254412	51139882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.6	chrX	-	4677	10	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-107	2006	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.829334520848	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGACGCTCGCTGATT	NA	False	NA	-15	True	ATTAAA	-15	NA	51254236	51139891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51141278_51141364_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.7	chrX	-	4617	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-303	-1663	-303	1663	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTTTTTTTTTTCTT	NA	False	NA	2	True	AATAAA	-29	NA	51254432	51140234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.8	chrX	-	2957	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	-283	-23	-283	23	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTATTTTAGCTGCCT	NA	False	NA	4	True	ATTAAA	-38	NA	51254412	51141874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36958.9	chrX	-	2719	9	NNC	ENSMUSG00000031119.5	novel	2651	9	NA	NA	-68	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.9537077827751	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTGTTATTTTAGCTG	NA	False	NA	1	True	ATTAAA	-35	NA	51254197	51141877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145797_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ES.36959.1	chrX	-	170	1	Intergenic	novelGene_30269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	51261884	51261714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51261700_51261900
ES.3696.1	chr10	+	3723	5	NNC	ENSMUSG00000019888.17	novel	4272	9	NA	NA	-4080	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.08972473588517	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGTTGTTTCTTGA	1952	False	NA	NA	False	ATTAAA	-21	NA	102203786	102227327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_102203886_102213470_102213549_102214012_102214166_102220866_102221015_102224082
ES.3696.2	chr10	+	3751	4	FSM	ENSMUSG00000019888.17	ENSMUST00000120748.2	2603	4	5	-1153	5	0	multi-exon	FALSE	canonical	1	1	junction_3	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTGTTGTTTCTTGA	8466	False	NA	NA	False	ATTAAA	-21	NA	102210300	102227327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_102210506_102214012_102214166_102220866_102221015_102224082
ES.36960.1	chrX	-	179	1	Intergenic	novelGene_30270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCACCTTCACTGGAG	NA	False	NA	NA	False	NA	NA	NA	51299794	51299615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51299600_51299800
ES.36961.1	chrX	+	2020	1	Intergenic	novelGene_30273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACACTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	51665022	51667042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51665000_51667000
ES.36962.1	chrX	-	2564	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	-348	0	-319	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	51703146	51361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
ES.36962.2	chrX	-	843	4	NNC	ENSMUSG00000055653.14	novel	2216	8	NA	NA	247912	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	127.50947677199	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAATAAACAT	NA	False	NA	NA	False	NA	NA	NA	51454886	51361331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51361832_51403713_51403874_51454598_51454720_51454824
ES.36962.3	chrX	-	3343	1	Antisense	novelGene_ENSMUSG00000086704.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTACTTGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	51423954	51420611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_51420600_51424000
ES.36962.4	chrX	-	1681	6	NNC	ENSMUSG00000055653.14	novel	1880	5	NA	NA	2	11028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.840267085274	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGGCTATTGTTGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	51702825	51465512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_51465761_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
ES.36962.5	chrX	-	11959	1	Intergenic	novelGene_30271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAAAGAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	51549976	51538017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51538000_51550000
ES.36962.6	chrX	-	3413	1	Intergenic	novelGene_30272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGGAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	51617340	51613927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51613900_51617300
ES.36963.1	chrX	-	3424	1	Intergenic	novelGene_30274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGGAGTTTGATGGTG	NA	False	NA	NA	False	AAAACA	-40	NA	51770562	51767138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51767100_51770600
ES.36964.1	chrX	-	178	1	Intergenic	novelGene_30275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATAAGCTAAC	NA	False	NA	NA	False	NA	NA	NA	51779506	51779328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51779300_51779500
ES.36965.1	chrX	-	184	1	Intergenic	novelGene_30276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTTTTGGATGA	NA	False	NA	NA	False	NA	NA	NA	51815325	51815141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_51815100_51815300
ES.36966.1	chrX	+	178	1	Intergenic	novelGene_30277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAGGCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	51817034	51817212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51817000_51817200
ES.36967.1	chrX	+	178	1	Intergenic	novelGene_30278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	51825062	51825240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51825100_51825200
ES.36968.1	chrX	-	3268	1	FSM	ENSMUSG00000065613.3	ENSMUST00000083679.3	91	1	-2663	-514	-2663	514	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTCTTTTTTCTTTTT	7147	False	NA	NA	False	AATAAA	-26	NA	51833468	51830200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51830200_51833500
ES.36969.1	chrX	-	468	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-23	-37	-23	37	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	51861649	51861181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_51861200_51861600
ES.3697.1	chr10	-	177	1	Intergenic	novelGene_2817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAGAAAACTAAG	NA	False	NA	NA	False	NA	NA	NA	102255465	102255288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_102255300_102255500
ES.36970.1	chrX	+	458	1	Intergenic	novelGene_30279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTTTTCTTGTACCTC	NA	False	NA	NA	False	NA	NA	NA	51861717	51862175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51861700_51862200
ES.36971.1	chrX	+	1674	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	-115	-23	-115	23	multi-exon	FALSE	canonical	3	142	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAACAAATATGCCTGT	NA	False	NA	NA	False	CATAAA	-19	NA	51879961	51888368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_51880203_51886935
ES.36971.2	chrX	+	1610	3	NNC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	-25	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCATAAAATATGCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	51880051	51888339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_51880203_51881316_51881372_51886935
ES.36971.3	chrX	+	1507	2	NNC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	1869	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAAATATGCCTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	51881945	51888341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_51882047_51886935
ES.36971.4	chrX	+	5425	1	NIC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	2838	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCATAAAATATGCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	51882914	51888339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_51882900_51888300
ES.36971.5	chrX	+	1541	2	NNC	ENSMUSG00000073207.2	novel	1536	2	NA	NA	6149	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCTGTGATTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	51886225	51888347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_51886355_51886935
ES.36972.1	chrX	+	3233	1	Intergenic	novelGene_30280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGATGTTTTCTTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	51893638	51896871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51893600_51896900
ES.36973.1	chrX	+	6648	1	Intergenic	novelGene_30281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGGTCAAGA	NA	False	NA	NA	False	NA	NA	NA	51924666	51931314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_51924700_51931300
ES.36974.1	chrX	+	976	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	-27	-67	-27	67	mono-exon	FALSE	NA	NA	NA	NA	NA	799	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACGGACCACAACTGACA	NA	False	NA	NA	False	AATAAA	-44	NA	51987437	51988413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_51987400_51988400
ES.36974.10	chrX	+	1137	1	Genic_Genomic	ENSMUSG00000025626.17	novel	NA	NA	NA	NA	-5	-27219	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	52001137	52002274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_52001100_52002300
ES.36974.12	chrX	+	172	1	Intergenic	novelGene_30282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGGTCTTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	52017850	52018022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_52017800_52018000
ES.36974.13	chrX	+	218	1	Intergenic	novelGene_30283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAATATAGAGCTGGTCA	NA	False	NA	NA	False	AAAAAG	-9	NA	52019416	52019634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_52019400_52019600
ES.36974.2	chrX	+	713	3	Genic_Genomic	ENSMUSG00000081684.5	novel	882	1	NA	NA	-27	8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATGAGAAAAATAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	51987437	51988354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_51987840_51987983_51988059_51988118
ES.36974.3	chrX	+	596	2	Genic_Genomic	ENSMUSG00000081684.5	novel	882	1	NA	NA	-26	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	51987438	51988384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_51987634_51987983
ES.36974.4	chrX	+	967	2	Genic_Genomic	ENSMUSG00000081684.5	novel	882	1	NA	NA	-26	13946	multi-exon	FALSE	non_canonical	0	0	junction_1	0	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGCGAAGCATGTAATA	NA	False	NA	NA	False	NA	NA	NA	51987438	52002292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_51988384_52002270
ES.36974.5	chrX	+	825	2	Genic_Genomic	ENSMUSG00000081684.5	novel	882	1	NA	NA	-23	38	multi-exon	FALSE	canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	51987441	51988384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_51987849_51987966
ES.36974.6	chrX	+	4442	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-50	-42	-50	42	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAATAGTGCCATGTT	NA	False	NA	59	True	NA	NA	NA	52001092	52045862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ES.36974.7	chrX	+	1432	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-21	2939	-21	-1961	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCGACTCTTAGATCC	NA	False	NA	9	True	AATAAA	-17	NA	52001121	52042881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ES.36974.8	chrX	+	3906	7	NIC	ENSMUSG00000025626.17	novel	4350	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	94.6484724300046	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001122	52045820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52001314_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ES.36974.9	chrX	+	4692	10	ISM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	-15	0	-15	0	intron_retention	FALSE	canonical	3	213	junction_7	26.1651922207848	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001127	52045820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328
ES.36975.1	chrX	-	7390	1	Antisense	novelGene_ENSMUSG00000025626.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAACCATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	52018815	52011425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_52011400_52018800
ES.36976.1	chrX	+	176	1	Intergenic	novelGene_30284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAGATTTATTTATTA	NA	False	NA	NA	False	NA	NA	NA	52051981	52052157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_52052000_52052200
ES.36977.1	chrX	+	1567	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-269	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGAATTCTTTCGTG	NA	False	NA	16	True	AATAAA	-20	NA	52076744	52110540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.11	chrX	+	1431	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1132.5164457967	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTTGAATTCTTTCG	NA	False	NA	14	True	AATAAA	-18	NA	52076983	52110538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52106305_52106411_52108981_52109029_52109199_52109277_52109943
ES.36977.12	chrX	+	1325	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-30	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGAATTCTTTCGTG	NA	False	NA	16	True	AATAAA	-20	NA	52076983	52110540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097616_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.13	chrX	+	1379	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-30	-7	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	764.555824891159	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGCCACTTTTTGA	NA	False	NA	5	True	AATAAA	-9	NA	52076983	52110529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101239_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.15	chrX	+	1019	7	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-28	-7	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	820.455446010866	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGCCACTTTTTGA	NA	False	NA	5	True	AATAAA	-9	NA	52076985	52110529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52077128_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.16	chrX	+	6024	7	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-15	1	intron_retention	FALSE	canonical	3	2155	junction_4	139.768558696153	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52076998	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52105307_52108981_52109029_52109199
ES.36977.17	chrX	+	1389	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1133.4816661508	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52077003	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52106326_52106411_52108981_52109029_52109199_52109277_52109943
ES.36977.18	chrX	+	1469	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1108.62915773265	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGCCACTTTTTGA	NA	False	NA	5	True	AATAAA	-9	NA	52077005	52110529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52094381_52094556_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.2	chrX	+	2476	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-76	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1058.27539720364	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52076937	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105199_52106411_52108981_52109029_52109199_52109277_52109943
ES.36977.20	chrX	+	547	4	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-1	-14041	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1107.63933159169	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATATATTCTTAC	NA	False	NA	NA	False	NA	NA	NA	52077012	52096495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52096354
ES.36977.22	chrX	+	1287	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1062.95435423337	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52077015	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077122_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.24	chrX	+	1327	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	31	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1137.78808851868	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTGAATTCTTTCGT	NA	False	NA	15	True	AATAAA	-19	NA	52077044	52110539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52086968_52087030_52087967_52088075_52090964_52091149_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.25	chrX	+	1246	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	46	-3	46	3	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTTGAATTCTTTCGT	NA	False	NA	15	True	AATAAA	-19	NA	52077059	52110539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.26	chrX	+	1914	8	ISM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	46	-4	46	4	intron_retention	FALSE	canonical	3	2155	junction_4	135.670218409441	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTGAATTCTTTCGTG	NA	False	NA	16	True	AATAAA	-20	NA	52077059	52110540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199
ES.36977.27	chrX	+	1259	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	54	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTTGAATTCTTTCG	NA	False	NA	14	True	AATAAA	-18	NA	52077067	52110538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097621_52105208_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.3	chrX	+	5420	8	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-74	5	intron_retention	FALSE	canonical	3	2155	junction_4	132.973681606549	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAATTCTTTCGTGT	NA	False	NA	17	True	AATAAA	-21	NA	52076939	52110541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.30	chrX	+	3762	2	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	29087	-7	intron_retention	FALSE	canonical	3	2215	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGCCACTTTTTGA	NA	False	NA	5	True	AATAAA	-9	NA	52106100	52110529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52109277_52109943
ES.36977.31	chrX	+	1738	3	ISM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	30948	-1	30948	1	3prime_fragment	FALSE	canonical	3	2215	junction_2	54.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52107961	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_52109029_52109199_52109277_52109943
ES.36977.4	chrX	+	1341	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCACTTTTTGAATTCTT	NA	False	NA	11	True	AATAAA	-15	NA	52076956	52110535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52105209_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.6	chrX	+	1285	8	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-47	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	818.20507882829	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTTGAATTCTTTC	NA	False	NA	13	True	AATAAA	-17	NA	52076966	52110537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097616_52105277_52105307_52108981_52109029_52109199_52109277_52109943
ES.36977.9	chrX	+	1378	9	NNC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	-31	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1108.46842535094	502	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCGCCACTTTTTGA	NA	False	NA	5	True	AATAAA	-9	NA	52076982	52110529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52077128_52087967_52088075_52090964_52091149_52096538_52096599_52097529_52097596_52105200_52105307_52108981_52109029_52109199_52109277_52109943
ES.36978.1	chrX	-	178	1	Intergenic	novelGene_30285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACTTATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	52086060	52085882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_52085900_52086100
ES.36979.1	chrX	-	1070	4	FSM	ENSMUSG00000087365.8	ENSMUST00000129764.8	868	4	-51	-151	-21	-10	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTGCTCATGTGTGT	NA	False	NA	NA	False	AATGAA	-4	NA	52146088	52143932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52144368_52144732_52145042_52145534_52145647_52145874
ES.3698.1	chr10	-	2574	8	FSM	ENSMUSG00000019892.14	ENSMUST00000020043.12	2542	8	30	-62	1	62	multi-exon	TRUE	canonical	0	0	junction_4	0.451753951452626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTATTGAAATACTGT	NA	False	NA	NA	False	AATAAA	-15	NA	103072153	103050197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_103051974_103053938_103054014_103057096_103057321_103059553_103059672_103060740_103060833_103063036_103063164_103069873_103070019_103072136
ES.3698.2	chr10	-	2499	7	NIC	ENSMUSG00000019892.14	novel	2542	8	NA	NA	-41	61	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGTATTGAAATACTG	NA	False	NA	NA	False	AATAAA	-14	NA	103072224	103050198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_103051974_103053938_103054014_103057096_103057321_103059553_103059672_103060740_103060833_103063036_103063164_103072136
ES.36980.1	chrX	+	1707	1	Intergenic	novelGene_30286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	52336774	52338481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_52336800_52338500
ES.36981.1	chrX	-	3584	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTCTCTTATTCCTG	NA	False	NA	-1	True	AATAAA	-36	NA	52358711	52332289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.10	chrX	-	4191	10	NNC	ENSMUSG00000036022.16	novel	4334	9	NA	NA	264	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	36.0801576739595	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGATCGTAAAAGTCTG	NA	False	NA	-16	True	AATAAA	-21	NA	52358411	52332304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52355147_52355289_52357752
ES.36981.11	chrX	-	3582	9	NNC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	-41	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.6050694807756	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATGGATCGTAAAAG	NA	False	NA	-20	True	AATAAA	-17	NA	52357938	52332308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354905_52354997_52357752
ES.36981.13	chrX	-	2674	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	2682	-7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	30.8692983439357	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATGGATCGTAAAAG	NA	False	NA	-20	True	AATAAA	-17	NA	52355215	52332308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52355147
ES.36981.14	chrX	-	3502	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	2707	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	35.665109000254	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATGGATCGTAAAAG	NA	False	NA	-20	True	AATAAA	-17	NA	52355190	52332308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52335168_52342730_52342806_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52355147
ES.36981.16	chrX	-	3409	10	NNC	ENSMUSG00000036022.16	novel	4334	9	NA	NA	1	-136	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.8956632370818	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTTGACTGACTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	52358681	52332437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.17	chrX	-	3425	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-25	136	-25	-136	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTTGACTGACTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	52357922	52332437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.2	chrX	-	4408	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-860	-12	-75	2	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTCTCTTATTCCTG	NA	False	NA	-1	True	AATAAA	-36	NA	52358757	52332289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.20	chrX	-	3119	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114841.2	3074	9	-36	-9	-29	9	multi-exon	FALSE	canonical	0	0	junction_1	28.9242005075335	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTTTGTTGACAGTAC	NA	False	NA	NA	False	AATAAA	-28	NA	52358711	52332613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52334249_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.21	chrX	-	4007	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-784	313	1	8	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCTTTGTTGACAGTA	NA	False	NA	NA	False	AATAAA	-27	NA	52358681	52332614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.23	chrX	-	3250	10	NNC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCACAGAGCAGCTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	52358711	52332623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.24	chrX	-	2149	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	-816	2203	-31	-764	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTTTGACCTGCTCC	NA	False	NA	NA	False	TTTAAA	-20	NA	52358713	52334504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.25	chrX	-	176	1	Intergenic	novelGene_30287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCTGTAATGCTG	NA	False	NA	NA	False	NA	NA	NA	52346185	52346009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_52346000_52346200
ES.36981.3	chrX	-	3468	9	NIC	ENSMUSG00000036022.16	novel	4334	9	NA	NA	-51	2	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	35.2916420700426	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTCTCTTATTCCTG	NA	False	NA	-1	True	AATAAA	-36	NA	52358733	52332289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52334249_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.5	chrX	-	4423	10	NIC	ENSMUSG00000036022.16	novel	2038	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	33.4390914874518	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCGTAAAAGTCTGCCT	NA	False	NA	-13	True	AATAAA	-24	NA	52358709	52332301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52335168_52342730_52342806_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.6	chrX	-	11290	8	NIC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	73	junction_2	9.11603207631075	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	-15	True	AATAAA	-22	NA	52357908	52332303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.7	chrX	-	4401	10	NNC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.6619934633186	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	-15	True	AATAAA	-22	NA	52358708	52332303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52335168_52341691_52341748_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ES.36981.8	chrX	-	2540	9	NNC	ENSMUSG00000036022.16	novel	3074	9	NA	NA	2680	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9042770163294	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGATCGTAAAAGTCTGC	NA	False	NA	-15	True	AATAAA	-22	NA	52355217	52332303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52334249_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52355147
ES.36982.1	chrX	-	179	1	Intergenic	novelGene_30288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATCCAGGAAACC	1757	False	NA	NA	False	NA	NA	NA	52427086	52426907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_52426900_52427100
ES.36983.1	chrX	-	2436	7	NNC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	9	139	intron_retention	FALSE	canonical	0	0	junction_3	43.7432534480715	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGCATTTTCTTTGC	NA	False	NA	NA	False	AAAAAG	-29	NA	52459370	52433335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52434867_52436580_52436743_52440547_52440666_52444527_52444751_52446286_52446363_52446450_52446705_52459298
ES.36983.2	chrX	-	2362	7	NNC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	-52	4	intron_retention	FALSE	canonical	1	3	junction_2	42.1056871323683	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTCTCCGTTCATTT	NA	False	NA	0	True	CATAAA	-22	NA	52459431	52433470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52434867_52436580_52436743_52440547_52440671_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ES.36983.3	chrX	-	1943	4	NIC	ENSMUSG00000023074.12	novel	1773	6	NA	NA	12673	1	intron_retention	FALSE	canonical	1	2	junction_1	43.0219582177391	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCTCTCTCCGTTCA	NA	False	NA	-3	True	CATAAA	-19	NA	52446706	52433473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52434867_52444532_52444751_52446286_52446363_52446450
ES.36983.4	chrX	-	2236	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	-55	-408	-55	-2	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTCTCTCTCCGT	NA	False	NA	-6	True	CATAAA	-16	NA	52459434	52433476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ES.36983.5	chrX	-	2250	7	NNC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	11	-2	intron_retention	FALSE	canonical	1	1	junction_6	42.6161810688017	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTCTCTCTCCGT	NA	False	NA	-6	True	CATAAA	-16	NA	52459368	52433476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52449263_52449344_52459298
ES.36983.6	chrX	-	1762	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	11	0	11	0	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCCTAAGCACAACGACT	NA	False	NA	NA	False	AATAAA	-20	NA	52459368	52433884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ES.36984.1	chrX	+	217	1	Intergenic	novelGene_30289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52506364	52506581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_52506400_52506600
ES.36985.1	chrX	+	2623	5	Antisense	novelGene_ENSMUSG00000079593.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	1.29903810567666	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGCTCTCTGGTCGAG	NA	False	NA	NA	False	NA	NA	NA	52549512	52578502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_52549659_52550126_52550264_52551675_52551841_52552289_52552399_52576436
ES.36986.1	chrX	+	1215	1	FSM	ENSMUSG00000051851.6	ENSMUST00000063384.4	401	1	-120	-694	-120	694	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52609878	52611093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52609900_52611100
ES.36986.2	chrX	+	928	2	Genic_Genomic	ENSMUSG00000051851.6	novel	401	1	NA	NA	-94	694	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52609904	52611093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_52610392_52610652
ES.36987.1	chrX	-	1252	1	FSM	ENSMUSG00000067925.5	ENSMUST00000088779.5	1195	1	-66	9	-66	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52645715	52644463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52644500_52645700
ES.36988.1	chrX	-	1360	1	FSM	ENSMUSG00000067924.5	ENSMUST00000088778.5	1232	1	-125	-3	-125	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAATGGAGTCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	52672500	52671140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52671100_52672500
ES.36989.1	chrX	+	3898	4	NIC	ENSMUSG00000055555.2	novel	1427	5	NA	NA	-54	2	intron_retention	FALSE	canonical	3	124	junction_3	20.138409955991	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTACCTGTAGTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	52726738	52740410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_52727016_52729333_52729516_52735693_52738355_52739632
ES.36989.2	chrX	+	1460	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-33	0	-33	0	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTTACCTGTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	52726759	52740408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
ES.36989.3	chrX	+	1583	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-33	-123	-33	123	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGTTTTCCATGATCCC	NA	False	NA	NA	False	AATAAA	-20	NA	52726759	52740531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
ES.36989.4	chrX	+	1452	3	ISM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-25	3693	-25	-3693	5prime_fragment	FALSE	canonical	3	164	junction_2	2.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAAATCTCATAAACT	NA	False	NA	NA	False	AATAAA	-17	NA	52726767	52736715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_52727016_52729333_52729516_52735693
ES.36989.5	chrX	+	10063	4	NNC	ENSMUSG00000055555.2	novel	1427	5	NA	NA	-24	121	intron_retention	FALSE	non_canonical	0	0	junction_2	71.4624998785299	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATCGTTTTCCATGATC	NA	False	NA	NA	False	AATAAA	-18	NA	52726768	52740529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_52727016_52729333_52733952_52734053_52738355_52739632
ES.36989.7	chrX	+	4116	2	ISM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	-20	7202	-20	-7202	5prime_fragment	FALSE	canonical	3	169	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCAGTTTATTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	52726772	52733206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_52727016_52729333
ES.3699.1	chr10	+	3910	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-364	-3	-339	1	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTGTCCCTCATTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	103203304	103255239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.10	chr10	+	1368	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-42	24006	-17	-1789	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAGTATCATTTATAG	NA	False	NA	1	True	ATTAAA	-14	NA	103203626	103231230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.11	chr10	+	3846	13	NNC	ENSMUSG00000019894.15	novel	3607	13	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.2084966401791	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203634	103255238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204015_103223939_103224077_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.12	chr10	+	3667	13	NNC	ENSMUSG00000019894.15	novel	3607	13	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.4011730816304	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTGTCCCTCATTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	103203667	103255239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204015_103224887_103225203_103228323_103228444_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.13	chr10	+	3764	11	NIC	ENSMUSG00000019894.15	novel	3607	13	NA	NA	11	0	intron_retention	FALSE	canonical	3	31	junction_8	32.0381023158364	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203679	103255238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.14	chr10	+	3322	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	355	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	33.5120553120764	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103204058	103255238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.15	chr10	+	3431	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	376	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	34.3374118308248	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103204079	103255238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.16	chr10	+	2130	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	381	-866	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	44.144648599802	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAATCAAT	NA	False	NA	NA	False	AATAAA	-7	NA	103204084	103232153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.17	chr10	+	3178	11	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	385	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.2739099148531	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTTCGTGTCCCTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	103204088	103255236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.18	chr10	+	1068	5	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	388	-1791	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	41.1969355656461	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTTAGTATCATTTAT	NA	False	NA	-1	True	ATTAAA	-12	NA	103204091	103231228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.19	chr10	+	3444	12	NIC	ENSMUSG00000019894.15	novel	3607	13	NA	NA	1509	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	35.2584319673094	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTTCGTGTCCCTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	103205212	103255236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103205330_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.20	chr10	+	7462	1	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-6072	1356	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGTTCTAAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	103223238	103230700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103223200_103230700
ES.3699.21	chr10	+	149	1	Intergenic	novelGene_2818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103249824	103249973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_103249800_103250000
ES.3699.3	chr10	+	1595	4	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-188	24887	-163	1005	5prime_fragment	FALSE	canonical	3	31	junction_1	34.2928563989645	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACATTTTCTATAGAA	NA	False	NA	NA	False	NA	NA	NA	103203480	103230349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761
ES.3699.4	chr10	+	1638	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-155	-1787	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGTATCATTTATAGTA	NA	False	NA	3	True	ATTAAA	-16	NA	103203488	103231232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.5	chr10	+	3821	12	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-120	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	31.6193789307593	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTGTCCCTCATTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	103203523	103255239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ES.3699.6	chr10	+	2341	5	ISM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	-77	23068	-52	-851	5prime_fragment	FALSE	canonical	3	31	junction_1	35.7596140918774	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTGATTTTAATATATT	NA	False	NA	NA	False	AATAAA	-22	NA	103203591	103232168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.7	chr10	+	2821	6	NIC	ENSMUSG00000019894.15	novel	3607	13	NA	NA	-44	-590	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	53.8256444457472	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTTACCAGAAACAGTT	NA	False	NA	NA	False	TATAAA	-15	NA	103203599	103232429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103205232_103205330_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.8	chr10	+	3297	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-41	-14	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTAAGAATAGAATTGT	NA	False	NA	NA	False	AATAAA	-21	NA	103203602	103233005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ES.3699.9	chr10	+	1992	5	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	-32	-1310	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	32.0341614530488	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGCCACTGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	103203611	103231709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850
ES.36990.1	chrX	-	3226	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-10	2339	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGCCTTGGTTGGCTG	NA	False	NA	NA	False	AGTAAA	-14	NA	52759808	52742528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
ES.36990.10	chrX	-	3315	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	6	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAGTATATTTATCACT	NA	False	NA	-5	True	AGTAAA	-23	NA	52759810	52744861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.11	chrX	-	4706	6	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1225	junction_3	157.511396413085	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52753824_52759728
ES.36990.12	chrX	-	5461	5	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	14	0	intron_retention	FALSE	canonical	3	1225	junction_3	162.029896932634	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759784	52744867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52753824_52759728
ES.36990.13	chrX	-	1177	10	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	433.772711719051	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759810	52744867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753696_52753754_52753824_52759728
ES.36990.14	chrX	-	888	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
ES.36990.15	chrX	-	5927	6	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	1225	junction_2	158.602648149393	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52747719_52748908_52749009_52749789_52752016_52752989_52753824_52759728
ES.36990.16	chrX	-	1273	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	490.52375173931	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759850	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52752956_52753054_52753476_52753824_52759728
ES.36990.17	chrX	-	3257	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-1	intron_retention	TRUE	canonical	0	0	junction_7	459.607832151498	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753690_52753740_52753824_52759728
ES.36990.18	chrX	-	3809	7	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-90	-1	intron_retention	FALSE	canonical	3	1225	junction_3	151.423706495677	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759888	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753824_52759728
ES.36990.19	chrX	-	2961	7	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	152	junction_6	449.65001822405	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGACTTTAGTATATT	NA	False	NA	-12	True	AGTAAA	-16	NA	52759810	52744868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52759728
ES.36990.2	chrX	-	3570	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-2334	-12	2334	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGTGGGGCCTTGGTT	NA	False	NA	NA	False	AGTAAA	-9	NA	52759810	52742533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.20	chrX	-	973	6	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	574.743560207507	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGACTTTAGTATA	NA	False	NA	-14	True	AGTAAA	-14	NA	52759803	52744870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52752989_52753054_52753476_52753824_52759728
ES.36990.21	chrX	-	3390	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-81	-3	intron_retention	FALSE	canonical	0	0	junction_2	490.352184971294	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGACTTTAGTATA	NA	False	NA	-14	True	AGTAAA	-14	NA	52759879	52744870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745439_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.22	chrX	-	1229	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	458.126006138049	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGACTTTAGTATA	NA	False	NA	-14	True	AGTAAA	-14	NA	52759810	52744870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753056_52753482_52753824_52759728
ES.36990.23	chrX	-	4280	7	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	1225	junction_3	147.767177982422	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGACTTTAGTATA	NA	False	NA	-14	True	AGTAAA	-14	NA	52759810	52744870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52753054_52753476_52753824_52759728
ES.36990.24	chrX	-	3347	8	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-8	-6	intron_retention	FALSE	canonical	0	0	junction_3	628.020570311749	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGATATTGACTTTAGT	NA	False	NA	-17	True	AGTAAA	-11	NA	52759806	52744873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748904_52749009_52749789_52752016_52752989_52753054_52753432_52753824_52759728
ES.36990.25	chrX	-	1179	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-52	97	-52	-97	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGTATGTCAAGGATT	NA	False	NA	-108	True	NA	NA	NA	52759850	52744964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.26	chrX	-	818	1	Intergenic	novelGene_30290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGAGGCGGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	52758622	52757804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_52757800_52758600
ES.36990.3	chrX	-	3017	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-20	-1773	-20	1773	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTTTTGGAATTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	52759818	52743094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.4	chrX	-	2486	10	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-8	1454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	433.772711719051	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTTGAATATTAATGT	NA	False	NA	NA	False	NA	NA	NA	52759806	52743413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52744175_52744374_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.5	chrX	-	2690	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-12	-1454	-12	1454	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTTGAATATTAATGT	NA	False	NA	NA	False	NA	NA	NA	52759810	52743413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36990.6	chrX	-	2706	9	NNC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-8	1449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	440.618244629067	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAATGCTTGAATATT	NA	False	NA	NA	False	NA	NA	NA	52759806	52743418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753849_52759728
ES.36990.7	chrX	-	6152	6	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	-9	1449	intron_retention	FALSE	canonical	3	1225	junction_3	157.511396413085	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAATGCTTGAATATT	NA	False	NA	NA	False	NA	NA	NA	52759807	52743418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52753824_52759728
ES.36990.9	chrX	-	1362	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	-132	-6	-132	6	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAGTATATTTATCACT	NA	False	NA	-5	True	AGTAAA	-23	NA	52759930	52744861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ES.36991.1	chrX	-	2560	2	Genic_Genomic	ENSMUSG00000059334.7	novel	2347	1	NA	NA	35	1344	multi-exon	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTCTATTAAATGTCTC	NA	False	NA	NA	False	AATAAA	-2	NA	52778326	52774670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_52774921_52776016
ES.36992.1	chrX	-	1103	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	-44	-27	-34	27	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTCCACACACTAATG	NA	False	NA	NA	False	AATAAA	-40	NA	52799707	52785687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
ES.36992.10	chrX	-	813	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	0	-211	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_7	85.2532840949813	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACAGAGTTTGAAAGG	NA	False	NA	NA	False	AATAAA	-26	NA	52799673	52785925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
ES.36992.2	chrX	-	9874	6	NIC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	257	junction_1	20.9895211951107	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGAGTGGCAAATAGT	NA	False	NA	NA	False	AATAAA	-11	NA	52799677	52785716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52797470_52797739_52797804_52798109
ES.36992.3	chrX	-	999	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	8	-7	at_least_one_novel_splicesite	TRUE	canonical	3	47	junction_7	85.2532840949813	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799655	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798218_52799598
ES.36992.4	chrX	-	1004	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-27	7	-17	-7	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799690	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ES.36992.5	chrX	-	979	8	NIC	ENSMUSG00000054626.12	novel	984	8	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	96.8662026946953	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799657	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799590
ES.36992.6	chrX	-	1096	8	NNC	ENSMUSG00000054626.12	novel	1032	8	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.3238896423	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799660	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798310_52799598
ES.36992.7	chrX	-	992	8	NNC	ENSMUSG00000054626.12	novel	984	8	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	106.917095481136	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799657	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789989_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ES.36992.8	chrX	-	2376	7	ISM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	12	7	12	-7	intron_retention	FALSE	canonical	3	257	junction_1	21.338541031039	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	False	NA	NA	False	AATAAA	-6	NA	52799651	52785721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109
ES.36992.9	chrX	-	784	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	-8	208	2	-208	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAGTTTGAAAGGCTC	NA	False	NA	NA	False	AATAAA	-29	NA	52799671	52785922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ES.36993.1	chrX	-	2096	3	NNC	ENSMUSG00000086711.2	novel	4529	2	NA	NA	103	16594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTCAGTAACTGCCT	NA	False	NA	NA	False	NA	NA	NA	52976864	52954809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_52956397_52975320_52975490_52976524
ES.36994.1	chrX	-	176	1	Intergenic	novelGene_30291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGGAAAGACCTT	NA	False	NA	NA	False	NA	NA	NA	53033462	53033286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_53033300_53033500
ES.36995.1	chrX	+	779	6	NNC	ENSMUSG00000096308.2	novel	468	5	NA	NA	-1643	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAGTTTGAAAGGCT	NA	False	NA	NA	False	AATAAA	-27	NA	53238038	53255325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_53238181_53239658_53239791_53245609_53245736_53246045_53246110_53252182_53252283_53255110
ES.36996.1	chrX	+	206	1	Intergenic	novelGene_30292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53255634	53255840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_53255600_53255800
ES.36997.1	chrX	+	691	7	NIC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	-5	-210	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	19.6864307469779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAGTTTGAAAGGCT	NA	False	NA	NA	False	AATAAA	-28	NA	55181926	55198648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55181986_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ES.36997.2	chrX	+	1029	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	-5	-2	-5	2	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGCAAATAGTCCTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	55181926	55198860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ES.36997.3	chrX	+	896	7	NIC	ENSMUSG00000031125.3	novel	1022	8	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	19.6864307469779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTGAGTGGCAAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	55181926	55198853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55181986_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ES.36998.1	chrX	-	940	8	FSM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	9	2	9	-2	multi-exon	FALSE	canonical	3	17	junction_1	4.42165358301205	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATTTTTTGCAATGT	NA	False	NA	NA	False	AATAAA	-17	NA	55258232	55235188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032_55248151_55258173
ES.36998.2	chrX	-	4667	1	NIC	ENSMUSG00000073177.9	novel	951	8	NA	NA	18385	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTGATTTTTTGCAATG	NA	False	NA	NA	False	AATAAA	-16	NA	55239856	55235189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_55235200_55239900
ES.36999.1	chrX	-	157	1	Intergenic	novelGene_30293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	55361520	55361363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55361400_55361500
ES.37.1	chr1	-	2805	2	Antisense	novelGene_ENSMUSG00000025907.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTCCCTGTCACAAAAA	NA	False	NA	NA	False	AAAAAG	-38	NA	6312213	6307921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_6308689_6310175
ES.37.2	chr1	-	4274	1	Antisense	novelGene_ENSMUSG00000025907.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-20	NA	6312213	6307939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_6307900_6312200
ES.370.1	chr1	+	189	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	42552575	42552764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_42552600_42552800
ES.3700.1	chr10	+	1176	2	FSM	ENSMUSG00000091779.9	ENSMUST00000180664.2	1185	2	-24	33	-24	-33	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	103979238	103981284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_103979308_103980177
ES.37000.1	chrX	-	178	1	Intergenic	novelGene_30294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	55386251	55386073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55386100_55386300
ES.37001.1	chrX	+	178	1	Intergenic	novelGene_30295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAGCTGGAGATAT	NA	False	NA	NA	False	NA	NA	NA	55386470	55386648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55386500_55386600
ES.37002.1	chrX	+	3533	4	NIC	ENSMUSG00000073176.5	novel	3738	5	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13.4742552876052	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTTTCTGATTCTTTT	NA	False	NA	5	True	AATAAA	-15	NA	55391758	55411033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55391800_55393642_55394089_55407826_55407941_55408101
ES.37002.2	chrX	+	3742	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	-1	-3	-1	3	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTGATTCTTTTACAT	NA	False	NA	9	True	AATAAA	-19	NA	55391758	55411037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
ES.37002.3	chrX	+	4080	5	NNC	ENSMUSG00000073176.5	novel	3738	5	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.3259198889987	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCTCTTTCTGATTCT	NA	False	NA	2	True	AATAAA	-12	NA	55391797	55411030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55392184_55393642_55394089_55398822_55399028_55407826_55407941_55408101
ES.37002.4	chrX	+	3694	4	ISM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	1882	5	1882	-5	3prime_fragment	FALSE	canonical	3	32	junction_3	5.73488351136175	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGCTCTTTCTGATTC	NA	False	NA	1	True	AATAAA	-11	NA	55393641	55411029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_55394089_55398822_55399028_55407826_55407941_55408101
ES.37003.1	chrX	+	2473	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-77	-3	-77	3	multi-exon	FALSE	canonical	3	59	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCTGCCTCCTGTTT	NA	False	NA	17	True	AAGAAA	-18	NA	55419868	55423162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55420569_55421389
ES.37003.10	chrX	+	1861	5	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.1650635094611	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATCCTGGCTGCCTCCT	NA	False	NA	13	True	AAGAAA	-14	NA	55419970	55423158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420219_55420454_55420569_55420777_55420910_55421187_55421517_55422120
ES.37003.11	chrX	+	2259	4	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16024689946929	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCCTGGCTGCCTCC	NA	False	NA	12	True	AAGAAA	-13	NA	55419973	55423157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420219_55420454_55420569_55420777_55420910_55421389
ES.37003.12	chrX	+	3525	3	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	41	2223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAGGCCAGGATAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	55419986	55425382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421389_55423136_55424185
ES.37003.2	chrX	+	2673	4	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	-45	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.35702260395516	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCCTGGCTGCCTCC	NA	False	NA	12	True	AAGAAA	-13	NA	55419900	55423157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55420777_55420910_55421187_55421293_55421389
ES.37003.3	chrX	+	2172	4	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	-31	2221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7124606795322	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGAGAGGCCAGGATAG	NA	False	NA	NA	False	AATAAA	-17	NA	55419914	55425380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421389_55421551_55422973_55423136_55424185
ES.37003.4	chrX	+	5503	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	-30	-3080	-30	3080	multi-exon	FALSE	canonical	3	59	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGGGTGTCAGCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	55419915	55426239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55420569_55421389
ES.37003.5	chrX	+	1237	4	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.8128667266709	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCCTGGCTGCCTCC	NA	False	NA	12	True	AAGAAA	-13	NA	55419928	55423157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421389_55421551_55422290_55422543_55422973
ES.37003.6	chrX	+	1929	3	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	-17	-3	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	29	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACATCCTGGCTGCCTC	NA	False	NA	11	True	AAGAAA	-12	NA	55419928	55423156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55419977_55420454_55420569_55421389
ES.37003.7	chrX	+	2991	4	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	9	3080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7124606795322	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGGGTGTCAGCTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	55419954	55426239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421389_55421551_55422973_55423136_55424185
ES.37003.8	chrX	+	1213	3	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	20	263	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	27	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTAATGTTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	55419965	55423422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421389_55421551_55422973
ES.37003.9	chrX	+	2461	3	NNC	ENSMUSG00000054850.5	novel	2393	2	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCCTGGCTGCCTCC	NA	False	NA	12	True	AAGAAA	-13	NA	55419970	55423157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55420569_55421187_55421283_55421389
ES.37004.1	chrX	+	204	1	Intergenic	novelGene_30296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAAGTTTCAGGAC	NA	False	NA	NA	False	NA	NA	NA	55443141	55443345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55443100_55443300
ES.37005.1	chrX	-	284	1	Intergenic	novelGene_30297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	55464398	55464114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55464100_55464400
ES.37006.1	chrX	+	3565	19	NNC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	8	junction_1	21.5556271476474	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500154	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500194_55500590_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.10	chrX	+	3796	17	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-27	1	intron_retention	FALSE	canonical	0	0	junction_16	25.4490145929071	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	17	True	AATAAA	-28	NA	55500189	55553201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552423_55552573
ES.37006.11	chrX	+	2957	10	ISM	ENSMUSG00000035967.16	ENSMUST00000101553.9	3201	11	-49	1292	-26	-1292	intron_retention	FALSE	canonical	3	51	junction_1	10.785220797662	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGGATGCTGTGCCGT	NA	False	NA	NA	False	ATTAAA	-22	NA	55500190	55539788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398
ES.37006.12	chrX	+	3837	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-19	-1	intron_retention	FALSE	canonical	2	3	junction_17	22.566165689147	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500197	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
ES.37006.13	chrX	+	3609	19	NNC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	22.8576512840279	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTACATTTCTAGGT	NA	False	NA	8	True	AATAAA	-19	NA	55500200	55553192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552277_55552573
ES.37006.14	chrX	+	6101	17	NIC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-15	0	intron_retention	FALSE	canonical	2	3	junction_16	22.488886144049	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTTCTAGGTGTATGT	NA	False	NA	14	True	AATAAA	-25	NA	55500201	55553198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
ES.37006.15	chrX	+	7184	16	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-14	1	intron_retention	FALSE	canonical	3	51	junction_1	13.3759319509168	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	17	True	AATAAA	-28	NA	55500202	55553201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.16	chrX	+	1267	2	NIC	ENSMUSG00000035967.16	novel	3201	11	NA	NA	-13	-15507	intron_retention	FALSE	canonical	3	83	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAAGGTACTGCA	NA	False	NA	NA	False	NA	NA	NA	55500203	55525573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989
ES.37006.17	chrX	+	5867	13	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-11	-5673	intron_retention	FALSE	canonical	3	51	junction_1	10.9122128319094	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATTTTAAAAATTATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	55500205	55547372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020
ES.37006.18	chrX	+	3693	19	NIC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	22.3606797749979	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTTCTAGGTGTATGT	NA	False	NA	14	True	AATAAA	-25	NA	55500205	55553198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
ES.37006.19	chrX	+	3854	17	NNC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-6	1	intron_retention	FALSE	canonical	0	0	junction_15	23.7946127043497	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	17	True	AATAAA	-28	NA	55500210	55553201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550277_55551732_55551827_55552239
ES.37006.2	chrX	+	3680	18	NNC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-45	-1	intron_retention	FALSE	canonical	3	8	junction_1	21.7064402925263	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500171	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500194_55500590_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.20	chrX	+	3773	18	NNC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_15	22.6662256555239	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGTGTATGTCTCTT	NA	False	NA	19	True	AATAAA	-30	NA	55500212	55553203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547124_55550084_55550460_55551732_55551827_55552239
ES.37006.21	chrX	+	7297	15	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	62	junction_6	11.9080233627653	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACATTTCTAGGTGT	NA	False	NA	10	True	AATAAA	-21	NA	55500214	55553194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.22	chrX	+	3451	18	NNC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	6	1	intron_retention	FALSE	canonical	0	0	junction_1	25.0828385340921	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTAGGTGTATGTCTC	NA	False	NA	17	True	AATAAA	-28	NA	55500222	55553201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500260_55500590_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.23	chrX	+	3495	16	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_3	29.6463600913614	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTAGGTGTATGTC	NA	False	NA	15	True	AATAAA	-26	NA	55500223	55553199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
ES.37006.24	chrX	+	3338	5	ISM	ENSMUSG00000035967.16	ENSMUST00000101553.9	3201	11	-11	12259	-8	-12259	intron_retention	FALSE	canonical	3	51	junction_1	14.9833240637717	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGTAACTGAATTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	55500228	55528821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249
ES.37006.25	chrX	+	3904	17	NNC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_4	23.7539470404394	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTAGGTGTATGTC	NA	False	NA	15	True	AATAAA	-26	NA	55500228	55553199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526321_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.26	chrX	+	3781	19	NNC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-4	-4	intron_retention	FALSE	canonical	1	1	junction_1	22.6908911947036	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACATTTCTAGGTGT	NA	False	NA	10	True	AATAAA	-21	NA	55500232	55553194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500496_55500590_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.27	chrX	+	6773	15	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_13	23.3536476196516	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500239	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55551732_55551827_55552239
ES.37006.28	chrX	+	7286	15	NNC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_13	23.4146299983404	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACATTTCTAGGTGT	NA	False	NA	10	True	AATAAA	-21	NA	55500239	55553194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551718_55551827_55552239
ES.37006.29	chrX	+	3231	19	NNC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	345	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	22.8576512840279	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500589	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552655
ES.37006.3	chrX	+	3833	17	FSM	ENSMUSG00000035967.16	ENSMUST00000039374.9	3766	17	-63	-4	-43	0	multi-exon	FALSE	canonical	3	20	junction_10	18.8414436814168	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGTGTATGTCTCTT	NA	False	NA	19	True	AATAAA	-30	NA	55500173	55553203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.31	chrX	+	3680	18	NNC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	433	-5	intron_retention	FALSE	canonical	0	0	junction_16	28.230146589605	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTACATTTCTAGGTG	NA	False	NA	9	True	AATAAA	-20	NA	55500677	55553193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55550829_55550948_55551732_55551827_55552239
ES.37006.32	chrX	+	6627	14	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-4190	-4	intron_retention	FALSE	canonical	3	62	junction_5	12.2850753731134	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACATTTCTAGGTGT	NA	False	NA	10	True	AATAAA	-21	NA	55524987	55553194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.33	chrX	+	2570	3	ISM	ENSMUSG00000035967.16	ENSMUST00000142624.2	719	4	-1480	-157	-1480	-1	intron_retention	FALSE	canonical	3	67	junction_1	18.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55548946	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_55550460_55551732_55551827_55552239
ES.37006.4	chrX	+	3683	18	NNC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_11	26.8811301047657	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTAGGTGTATGTC	NA	False	NA	15	True	AATAAA	-26	NA	55500174	55553199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500194_55500590_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539613_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.5	chrX	+	3328	20	NNC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_19	25.6752572833282	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTAGGTGTATGTC	NA	False	NA	15	True	AATAAA	-26	NA	55500174	55553199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500194_55500590_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239_55552360_55552573
ES.37006.6	chrX	+	6949	16	NNC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-39	-1	intron_retention	FALSE	canonical	1	5	junction_1	21.6143984931856	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGTGTATGTCTCT	NA	False	NA	18	True	AATAAA	-29	NA	55500177	55553202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500198_55500590_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.7	chrX	+	3939	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	-38	0	intron_retention	FALSE	canonical	3	44	junction_10	16.0656094259874	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGTGTATGTCTCTT	NA	False	NA	19	True	AATAAA	-30	NA	55500178	55553203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.8	chrX	+	3757	18	NNC	ENSMUSG00000035967.16	novel	3608	18	NA	NA	-38	0	intron_retention	FALSE	canonical	0	0	junction_8	32.8374417069094	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTTCTAGGTGTATGT	NA	False	NA	14	True	AATAAA	-25	NA	55500178	55553198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55500198_55500590_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55533974_55534170_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37006.9	chrX	+	4057	17	NIC	ENSMUSG00000035967.16	novel	3766	17	NA	NA	-29	0	intron_retention	FALSE	canonical	3	44	junction_9	15.57040461902	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTTCTAGGTGTATGT	NA	False	NA	14	True	AATAAA	-25	NA	55500187	55553198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ES.37007.1	chrX	-	2954	1	Intergenic	novelGene_30298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-4	NA	55522523	55519569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55519600_55522500
ES.37007.2	chrX	-	179	1	Intergenic	novelGene_30299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAAAGAATTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	55522450	55522271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55522300_55522400
ES.37008.1	chrX	-	160	1	Intergenic	novelGene_30300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	55529527	55529367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55529400_55529500
ES.37009.1	chrX	-	1124	5	FSM	ENSMUSG00000064016.5	ENSMUST00000081133.5	1040	5	-106	22	-106	-22	multi-exon	FALSE	canonical	0	0	junction_3	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTGTTTTGTTTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	55595072	55589255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_55589511_55589905_55590000_55590336_55590676_55592483_55592638_55594790
ES.3701.1	chr10	+	1176	2	FSM	ENSMUSG00000097427.6	ENSMUST00000180692.3	509	2	-24	-643	-24	-33	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	103987748	103989793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_103987818_103988686
ES.3701.2	chr10	+	1864	1	NIC	ENSMUSG00000097427.6	novel	1246	2	NA	NA	157	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	103987929	103989793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_103987900_103989800
ES.37010.1	chrX	+	5073	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-12023	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	52.3119796019663	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTATTTGAGTCACAG	NA	False	NA	24	True	ATTAAA	-28	NA	55643093	55709200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55643537_55644417_55644515_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.10	chrX	+	4827	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTTGTACATGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	55655141	55709590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.11	chrX	+	2351	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	9	375	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATCTGAGTACCGAG	NA	False	NA	22	True	CATAAA	-24	NA	55655143	55707116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.15	chrX	+	4318	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	17	-98	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTACGTGCTTTCTGT	NA	False	NA	-85	True	NA	NA	NA	55655151	55709091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.17	chrX	+	4370	18	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.8094774947935	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTATTTGAGTCA	NA	False	NA	21	True	ATTAAA	-25	NA	55655161	55709197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535_55707386_55707429
ES.37010.18	chrX	+	4677	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.9978280313085	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	16	True	ATTAAA	-20	NA	55655163	55709192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55704566_55704645_55706026_55706219_55706535
ES.37010.19	chrX	+	2460	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	51	2465	9	384	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACCGAGTTCTTGTGC	NA	False	NA	31	True	CATAAA	-33	NA	55655185	55707125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.2	chrX	+	2635	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-11538	380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.1073204022829	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAGTACCGAGTTCTT	NA	False	NA	27	True	CATAAA	-29	NA	55643578	55707121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55643663_55644417_55644515_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.20	chrX	+	4569	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	52	355	10	34	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGAATGCTGACTTCA	NA	False	NA	59	True	NA	NA	NA	55655186	55709235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.21	chrX	+	7009	16	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	43.3612217950043	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATTCACTGTTAT	NA	False	NA	13	True	ATTAAA	-17	NA	55655194	55709189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55706219_55706535
ES.37010.22	chrX	+	4916	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	60	0	18	0	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTTGTACATGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	55655194	55709590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.23	chrX	+	4405	17	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	42.3445225944277	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATTCACTGTTAT	NA	False	NA	13	True	ATTAAA	-17	NA	55655194	55709189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535_55708332_55708441
ES.37010.24	chrX	+	4416	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	60	500	18	-99	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTACGTGCTTTCTG	NA	False	NA	-86	True	NA	NA	NA	55655194	55709090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.25	chrX	+	2203	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	61	2712	19	137	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTAGTGCATGTCTCT	NA	False	NA	NA	False	AAGAAA	-15	NA	55655195	55706878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.27	chrX	+	4353	15	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.8624314443839	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTCACTGTTATTTGA	NA	False	NA	17	True	ATTAAA	-21	NA	55655195	55709193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655548_55665685_55665816_55668364_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.28	chrX	+	3992	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	61	923	19	-522	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTAACCTGTCTCTT	NA	False	NA	NA	False	TATAAA	-17	NA	55655195	55708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.29	chrX	+	2298	16	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	145	357	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	32.6612240363945	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTGACTCTTTCTTAT	NA	False	NA	4	True	CATAAA	-6	NA	55655321	55707098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678947_55680139_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.3	chrX	+	5084	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-11519	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.1073204022829	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCTCTTTGTACATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	55643597	55709589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55643663_55644417_55644515_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.30	chrX	+	4019	12	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	145	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	48.7113271060208	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTATTTGAGTCA	NA	False	NA	21	True	ATTAAA	-25	NA	55655321	55709197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55703618_55703725_55706535
ES.37010.31	chrX	+	4138	14	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	10521	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	44.4705873144787	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	16	True	ATTAAA	-20	NA	55665697	55709192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691330_55700333_55700414_55703618_55703725_55706535
ES.37010.32	chrX	+	4059	11	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-17418	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.2027485922152	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCTCTTTGTACATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	55673789	55709589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55673860_55678809_55678947_55680139_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.33	chrX	+	177	1	Intergenic	novelGene_30302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATATCTATAT	NA	False	NA	NA	False	NA	NA	NA	55689195	55689372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55689200_55689400
ES.37010.4	chrX	+	4747	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-11512	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.3119796019663	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTATTTTTCTACCTAT	NA	False	NA	76	True	NA	NA	NA	55643604	55709252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55643670_55644417_55644515_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.5	chrX	+	4663	19	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-11495	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	52.1073204022829	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	16	True	ATTAAA	-20	NA	55643621	55709192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55643663_55644417_55644515_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.6	chrX	+	4553	18	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-1420	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.1890021768022	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	16	True	ATTAAA	-20	NA	55653696	55709192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55653725_55654883_55655019_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.7	chrX	+	4442	17	NNC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	37.5097903886439	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATTCACTGTTATTTG	NA	False	NA	16	True	ATTAAA	-20	NA	55655130	55709192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678948_55680139_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.8	chrX	+	3914	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-3	-522	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTAACCTGTCTCTT	NA	False	NA	NA	False	TATAAA	-17	NA	55655131	55708667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37010.9	chrX	+	4501	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	-3	53	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	37.5097903886439	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTTCTACCTATAT	NA	False	NA	78	True	NA	NA	NA	55655131	55709254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ES.37011.1	chrX	-	3535	2	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	11080	2890	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGGCTTCTTTGTTT	NA	False	NA	NA	False	TATAAA	-43	NA	55632349	55627981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55628118_55628950
ES.37011.10	chrX	-	4196	5	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	131	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.3623596676957	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGTGTTTGGTAGTG	NA	False	NA	-8	True	AATAAA	-13	NA	55643298	55630872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55634664_55636437_55636542_55640749_55640803_55641400_55641495_55643144
ES.37011.2	chrX	-	4291	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	-50	-7	-50	7	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTAGTGGGTTTTTG	NA	False	NA	0	True	AATAAA	-21	NA	55643479	55630864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ES.37011.3	chrX	-	4066	5	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	127	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.7388287251287	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTAGTGGGTTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	55643302	55630865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55631343_55631389_55634664_55636437_55636542_55640749_55640803_55643144
ES.37011.4	chrX	-	3995	3	NIC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	138	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	65	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGGTAGTGGGTT	NA	False	NA	-4	True	AATAAA	-17	NA	55643291	55630868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_55634664_55640749_55640803_55643144
ES.37011.5	chrX	-	3826	7	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	130	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.7462586092808	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTGGTAGTGGGT	NA	False	NA	-5	True	AATAAA	-16	NA	55643299	55630869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55632406_55632466_55632774_55632891_55633299_55633399_55634664_55636437_55636542_55640749_55640803_55643144
ES.37011.7	chrX	-	8320	3	NIC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	123	1	intron_retention	FALSE	canonical	3	137	junction_2	1.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTTTGGTAGTGGG	NA	False	NA	-6	True	AATAAA	-15	NA	55643306	55630870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_55634664_55636437_55640803_55643144
ES.37011.8	chrX	-	4125	5	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	32	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.7388287251287	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTTTGGTAGTGGG	NA	False	NA	-6	True	AATAAA	-15	NA	55643397	55630870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55631384_55631461_55634664_55636437_55636542_55640749_55640803_55643144
ES.37011.9	chrX	-	2894	2	NNC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	9622	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	False	NA	-7	True	AATAAA	-14	NA	55633807	55630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_55631289_55631330
ES.37012.1	chrX	-	239	1	Intergenic	novelGene_30301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGGACCAAGTCACTT	NA	False	NA	NA	False	AATAGA	-16	NA	55646071	55645832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55645800_55646100
ES.37013.1	chrX	+	2628	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	-273	1	-273	-1	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTCCTGTCTTTTTATT	NA	False	NA	11	True	AATAAA	-17	NA	55776873	55838705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ES.37013.10	chrX	+	202	1	Intergenic	novelGene_30303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGAAAGGCCTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	55783916	55784118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55783900_55784100
ES.37013.11	chrX	+	2033	4	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	9411	6	1136	-4	3prime_fragment	FALSE	canonical	3	131	junction_2	4.24264068711928	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGAGCACGCCTCCT	NA	False	NA	0	True	AATAAA	-6	NA	55834493	55838694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_55834679_55835236_55835407_55835823_55836011_55837203
ES.37013.12	chrX	+	3382	1	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	1964	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	55835321	55838703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55835300_55838700
ES.37013.2	chrX	+	2267	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCACGCCTCCTGTCTTT	NA	False	NA	6	True	AATAAA	-12	NA	55777042	55838700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
ES.37013.3	chrX	+	2408	7	NNC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	51.6462325182906	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCACGCCTCCTGTCTTT	NA	False	NA	6	True	AATAAA	-12	NA	55777105	55838700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55777246_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ES.37013.4	chrX	+	2580	8	NIC	ENSMUSG00000023092.17	novel	2770	8	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	57.513796037941	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTCCTGTCTTTTTATT	NA	False	NA	11	True	AATAAA	-17	NA	55777121	55838705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
ES.37013.5	chrX	+	2182	6	NNC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.5278234562425	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGCCTCCTGTCTTTTT	NA	False	NA	8	True	AATAAA	-14	NA	55777146	55838702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55777246_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
ES.37013.6	chrX	+	2716	5	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	22	junction_4	52.7227417724079	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCACGCCTCCTGTCT	NA	False	NA	4	True	AATAAA	-10	NA	55777149	55838698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55835407_55837203
ES.37013.7	chrX	+	2538	7	NNC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	52.1709263436596	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCACGCCTCCTGTCT	NA	False	NA	4	True	AATAAA	-10	NA	55777173	55838698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836986
ES.37013.8	chrX	+	2887	6	NNC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	-37	3	intron_retention	FALSE	canonical	1	2	junction_1	55.4422221776869	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCCTCCTGTCTTTTTA	NA	False	NA	9	True	AATAAA	-15	NA	55777187	55838703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_55777246_55799694_55799752_55833348_55833531_55834503_55835407_55835823_55836011_55837203
ES.37013.9	chrX	+	2413	7	FSM	ENSMUSG00000023092.17	ENSMUST00000116596.8	1203	7	-107	-1103	-107	0	multi-exon	FALSE	canonical	1	1	junction_1	52.0173582139227	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCACGCCTCCTGTCT	NA	False	NA	4	True	AATAAA	-10	NA	55777381	55838698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_55777529_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ES.37014.1	chrX	-	239	1	Intergenic	novelGene_30304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTGAGCCCTTCAGGA	NA	False	NA	NA	False	NA	NA	NA	55785361	55785122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55785100_55785400
ES.37015.1	chrX	-	1574	1	Intergenic	novelGene_30305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGTGGCTACCCTGA	NA	False	NA	NA	False	AATAAA	-13	NA	55841773	55840199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_55840200_55841800
ES.37016.1	chrX	+	166	1	Intergenic	novelGene_30306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAAAAAAGAACCCTTCT	NA	False	NA	NA	False	NA	NA	NA	55850251	55850417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55850300_55850400
ES.37017.1	chrX	-	2959	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	-68	0	-68	0	multi-exon	FALSE	canonical	2	2	junction_7	2.18682926224756	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTTGTCTCTTTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	55867754	55843217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
ES.37017.2	chrX	-	2584	14	ISM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	2	2825	2	-2825	5prime_fragment	FALSE	canonical	2	2	junction_5	2.32557176274323	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACACCACCTGTCTTTAT	NA	False	NA	NA	False	TATAAA	-2	NA	55867684	55846042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
ES.37018.1	chrX	+	176	1	Intergenic	novelGene_30307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	55882497	55882673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55882500_55882700
ES.37019.1	chrX	+	178	1	Intergenic	novelGene_30308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	55912446	55912624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_55912400_55912600
ES.3702.1	chr10	+	1086	2	FSM	ENSMUSG00000097878.6	ENSMUST00000181179.5	1246	2	-1	161	-1	-161	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCTTTCTTTTATTTA	NA	False	NA	NA	False	TTTAAA	-26	NA	103995865	103998173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_103995973_103997194
ES.3702.2	chr10	+	1038	2	FSM	ENSMUSG00000097878.6	ENSMUST00000181166.3	509	2	-24	-505	-24	-171	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTCTCCTTCTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	103996257	103998163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_103996327_103997194
ES.37020.1	chrX	+	3146	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-332	-4	-300	4	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTAACTTGTGTC	NA	False	NA	20	True	AATAAA	-35	NA	56098642	56112547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.10	chrX	+	1939	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-49	920	-17	-920	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAGAAGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	56098925	56111623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.11	chrX	+	3084	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	-37	-237	-5	237	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTGTGATCCACAGC	NA	False	NA	NA	False	ACTAAA	-20	NA	56098937	56112780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.12	chrX	+	888	3	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	4	1245	4	-1243	5prime_fragment	FALSE	canonical	3	407	junction_1	70	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAACTGCCATTGCCAA	NA	False	NA	NA	False	AATAAA	-20	NA	56098946	56101321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_56099126_56099313_56099559_56100857
ES.37020.15	chrX	+	2733	9	NNC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-23	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	168.393837105163	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTTAACTTGTGTCT	NA	False	NA	21	True	AATAAA	-36	NA	56099234	56112548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105304_56109476_56109567_56110365_56110504_56111005
ES.37020.16	chrX	+	990	5	NNC	ENSMUSG00000067873.12	novel	1128	6	NA	NA	-20	1018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	230.993912257445	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCATATTTAATTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	56099237	56103584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56103299
ES.37020.17	chrX	+	3090	8	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-19	-10	intron_retention	FALSE	canonical	3	455	junction_4	30.4898778787522	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGAAATGTGGACTTG	NA	False	NA	6	True	AATAAA	-21	NA	56099238	56112533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56099559_56100857_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.18	chrX	+	1246	4	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	306	0	-9	0	intron_retention	FALSE	canonical	3	520	junction_3	11.0453610171873	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACTGGCTCACTTAT	NA	False	NA	25	True	NA	NA	NA	56099248	56102566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859
ES.37020.19	chrX	+	5362	7	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	455	junction_3	32.6121994896934	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56099248	56112543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56099559_56100857_56101039_56101404_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.2	chrX	+	1170	6	FSM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	-42	0	-42	0	multi-exon	FALSE	canonical	3	35	junction_5	193.065170344109	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACTGGCTCACTTAT	NA	False	NA	25	True	NA	NA	NA	56098900	56102566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
ES.37020.21	chrX	+	8940	5	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	3	-7	intron_retention	FALSE	canonical	3	455	junction_2	18.2277261335582	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAATGTGGACTTGAGT	NA	False	NA	9	True	AATAAA	-24	NA	56099260	56112536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56102015_56104245_56104410_56105213_56109567_56110365_56110504_56111005
ES.37020.22	chrX	+	6588	1	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	6695	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGACTTGAGTTAAC	NA	False	NA	13	True	AATAAA	-28	NA	56105952	56112540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56106000_56112500
ES.37020.4	chrX	+	4535	8	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-28	0	intron_retention	FALSE	canonical	3	407	junction_1	33.7795977550029	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56098914	56112543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56099126_56099313_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.6	chrX	+	4718	7	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	455	junction_3	22.4158921799294	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56098919	56112543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.7	chrX	+	2876	10	NNC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-21	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	158.521253005144	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTGAAATGTGGACTT	NA	False	NA	5	True	AATAAA	-20	NA	56098921	56112532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110341_56110504_56111005
ES.37020.8	chrX	+	3053	9	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-19	4	intron_retention	FALSE	canonical	3	455	junction_5	31.3996417177012	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTAACTTGTGTC	NA	False	NA	20	True	AATAAA	-35	NA	56098923	56112547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37020.9	chrX	+	4159	9	NIC	ENSMUSG00000067873.12	novel	2810	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	407	junction_1	37.261743115426	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56098924	56112543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56099126_56099313_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ES.37021.1	chrX	-	158	1	Intergenic	novelGene_30309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	56121234	56121076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56121100_56121200
ES.37022.1	chrX	-	2856	3	Intergenic	novelGene_30310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGTACACATTGTACT	NA	False	NA	NA	False	NA	NA	NA	56230630	56224613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56227408_56228490_56228530_56230607
ES.37023.1	chrX	+	180	1	Intergenic	novelGene_30311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGGAAGTTGGAAAGGT	3041	False	NA	NA	False	NA	NA	NA	56377860	56378040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56377900_56378000
ES.37024.1	chrX	-	4263	20	NIC	ENSMUSG00000031133.13	novel	4569	22	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.31262778035157	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGTGTTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	56383930	56276844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_56279012_56280216_56280272_56282345_56282446_56284525_56284604_56285953_56286048_56289964_56290111_56290911_56290991_56291746_56291834_56294322_56294470_56296649_56296710_56301480_56301620_56319254_56319378_56321237_56321334_56325571_56325667_56334580_56334652_56344819_56345022_56347669_56347792_56349925_56350011_56382311_56382396_56383697
ES.37024.2	chrX	-	4041	19	NNC	ENSMUSG00000031133.13	novel	4569	22	NA	NA	-4013	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.30052221230218	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTCCTGTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	56350232	56276847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56279012_56280216_56280272_56282345_56282446_56284525_56284604_56285953_56286048_56289964_56290111_56290911_56290991_56291746_56291834_56294322_56294470_56296649_56296710_56301480_56301620_56319254_56319378_56321237_56321334_56325571_56325667_56334580_56334652_56344819_56345022_56347669_56347792_56349925_56350011_56350134
ES.37025.1	chrX	+	208	1	Intergenic	novelGene_30312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56393452	56393660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56393500_56393700
ES.37025.2	chrX	+	175	2	Intergenic	novelGene_30313	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGTGTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	56393453	56425084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56393581_56425036
ES.37025.3	chrX	+	190	1	Intergenic	novelGene_30316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGAATAAGTAAATAGAAT	NA	False	NA	NA	False	NA	NA	NA	56424910	56425100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56424900_56425100
ES.37026.1	chrX	-	3310	11	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	4	6648	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.9283597875856	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAATGTGAAAGTGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	56438337	56422241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56424374_56429848_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434222_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.10	chrX	-	2464	9	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	181	181	intron_retention	FALSE	canonical	0	0	junction_8	24.4438131231606	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTTGGGTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	56437976	56428708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56437799
ES.37026.12	chrX	-	3626	11	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	2	181	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	24.8265986393626	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTGTTGGGTTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	56438394	56428708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56429922_56430492_56430582_56431500_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.13	chrX	-	3842	7	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	2590	180	intron_retention	FALSE	canonical	2	5	junction_2	26.3148669428941	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGGTGTTGGGTTCT	NA	False	NA	-7	True	AATAAA	-14	NA	56435567	56428709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56429922_56430492_56430582_56431500_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423
ES.37026.15	chrX	-	2105	9	NIC	ENSMUSG00000031134.17	novel	2108	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	19.0028780714922	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTGAAGCTGCAAACCG	NA	False	NA	-14	True	AATAAA	-17	NA	56438394	56431719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.16	chrX	-	157	1	Intergenic	novelGene_30317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAGTTCAGAGCAGTA	NA	False	NA	NA	False	AAAACA	-7	NA	56436066	56435909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56435900_56436100
ES.37026.2	chrX	-	3307	11	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	-19	6645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.9945447781944	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTGAATGTGAAAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	56438360	56422244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56424374_56429869_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.3	chrX	-	5324	2	Intergenic	novelGene_30314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGTTGAATGTGAA	NA	False	NA	NA	False	AATAAA	-12	NA	56427703	56422248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56423380_56423510
ES.37026.4	chrX	-	8780	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	-6641	0	6641	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGTTGAATGTGAA	NA	False	NA	NA	False	AATAAA	-12	NA	56438341	56422248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.5	chrX	-	2303	1	Intergenic	novelGene_30315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	56426096	56423793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56423800_56426100
ES.37026.6	chrX	-	2808	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	4	-673	4	673	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTTTTTGTGTTATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	56438337	56428216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.7	chrX	-	2324	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	-185	0	185	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTTGGGTTCTTTTTT	NA	False	NA	-2	True	AATAAA	-19	NA	56438341	56428704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ES.37026.9	chrX	-	2337	10	NNC	ENSMUSG00000031134.17	novel	2139	10	NA	NA	405	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.1228602613662	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTTGGGTTCTTT	NA	False	NA	-5	True	AATAAA	-16	NA	56437752	56428707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56437606
ES.37027.1	chrX	+	2305	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	-145	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	151.271641013774	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTCCCTGTCTGGCCTC	NA	False	NA	12	True	TATAAA	-5	NA	56454368	56534130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ES.37027.12	chrX	+	2195	18	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	209.787782043687	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAACCTCCCTGTCTGGCC	NA	False	NA	10	True	TATAAA	-3	NA	56454528	56534128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56530745_56530799_56533944
ES.37027.13	chrX	+	4943	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	16	-2803	16	2803	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTATCTCCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	56454529	56536930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ES.37027.16	chrX	+	6244	9	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	14111	6	intron_retention	FALSE	canonical	0	0	junction_1	205.205042274794	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTCTGGCCTCAGT	NA	False	NA	15	True	TATAAA	-8	NA	56468624	56534133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56509775_56513777_56517886_56533944
ES.37027.17	chrX	+	1764	1	Intergenic	novelGene_30318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	2156	False	NA	NA	False	NA	NA	NA	56476366	56478130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56476400_56478100
ES.37027.3	chrX	+	2003	15	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	211.8629827728	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454507	56534129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ES.37027.4	chrX	+	1918	15	NIC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	161.318609830208	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454513	56534129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ES.37027.5	chrX	+	2100	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	173.722648476674	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAAACCTCCCTGTC	NA	False	NA	5	True	NA	NA	NA	56454514	56534123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533995
ES.37027.6	chrX	+	2079	18	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	168.963438644625	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454515	56534129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944_56534026_56534102
ES.37027.7	chrX	+	2153	17	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	151.271641013774	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454515	56534129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468734_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ES.37027.8	chrX	+	2393	16	ISM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	2	15820	2	-15820	5prime_fragment	FALSE	canonical	1	199	junction_7	110.207481093113	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGAAATGTTTTTTCTT	NA	False	NA	NA	False	AGTAAA	-27	NA	56454515	56518307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713
ES.37027.9	chrX	+	5970	16	NNC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	13	2	intron_retention	FALSE	canonical	0	0	junction_7	153.498664489304	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCCCTGTCTGGCCT	NA	False	NA	11	True	TATAAA	-4	NA	56454526	56534129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468741_56478571_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56517886_56533944
ES.37028.1	chrX	-	4958	1	Antisense	novelGene_ENSMUSG00000079584.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGGTGAAGCACAGTGAT	NA	False	NA	NA	False	NA	NA	NA	56460686	56455728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_56455700_56460700
ES.37029.1	chrX	+	256	1	Intergenic	novelGene_30319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTATTCAATTTTTTT	2515	False	NA	NA	False	NA	NA	NA	56795259	56795515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56795300_56795500
ES.3703.1	chr10	+	1136	2	FSM	ENSMUSG00000095022.9	ENSMUST00000181703.8	1246	2	77	33	77	-33	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	104021470	104023828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_104021500_104022721
ES.3703.2	chr10	+	1156	2	FSM	ENSMUSG00000095022.9	ENSMUST00000181707.2	1185	2	-46	75	-46	-75	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCATTTTCACCTTT	NA	False	NA	NA	False	GATAAA	-21	NA	104021762	104023786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_104021854_104022721
ES.37030.1	chrX	-	176	1	Intergenic	novelGene_30320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCAGTCCTTAAG	NA	False	NA	NA	False	NA	NA	NA	56798331	56798155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_56798200_56798300
ES.37031.1	chrX	+	174	1	Intergenic	novelGene_30321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGTATGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56928565	56928739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56928600_56928700
ES.37032.1	chrX	+	178	1	Intergenic	novelGene_30322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATTGTAT	NA	False	NA	NA	False	NA	NA	NA	56990659	56990837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_56990700_56990800
ES.37033.1	chrX	+	178	1	Intergenic	novelGene_30323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGTGAGAAAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	57024975	57025153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_57025000_57025200
ES.37034.1	chrX	+	4333	7	NNC	ENSMUSG00000067860.12	novel	2980	4	NA	NA	-3165	76	intron_retention	FALSE	canonical	0	0	junction_1	95.7403897120866	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAATTTCTGGTGCT	NA	False	NA	10	True	AATAAA	-20	NA	57064894	57081995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57065222_57065695_57065867_57066865_57066974_57073596_57073670_57076373_57077598_57078721_57078886_57079729
ES.37034.10	chrX	+	3632	4	NNC	ENSMUSG00000067860.12	novel	2980	4	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_1	96.2439031258027	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTTATAACTTTTTT	9490	False	NA	10	True	AATAAA	-16	NA	57075992	57081917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57076049_57076373_57077598_57078721_57078886_57079729
ES.37034.11	chrX	+	2201	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088629.4	1951	3	-252	2	115	-2	multi-exon	FALSE	canonical	3	14	junction_2	99.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGATTATTGTTTT	9615	False	NA	NA	False	NA	NA	NA	57076117	57087094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57086537
ES.37034.12	chrX	+	8756	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	368	-5175	1	-2	multi-exon	FALSE	canonical	3	194	junction_2	9.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGATTATTGTTTT	9868	False	NA	NA	False	NA	NA	NA	57076370	57087094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57079729
ES.37034.13	chrX	+	1611	3	NNC	ENSMUSG00000067860.12	novel	3949	3	NA	NA	1	9498	intron_retention	FALSE	canonical	2	4	junction_2	104.5	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTTTGCATTTTT	9868	False	NA	NA	False	AATAAA	-13	NA	57076370	57096594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57077598_57078721_57078886_57096374
ES.37034.14	chrX	+	2996	2	ISM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	372	1425	5	-1425	intron_retention	FALSE	canonical	3	213	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATCGTTTGTAATTT	9872	False	NA	NA	False	AATACA	-15	NA	57076374	57080494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_57077598_57078721
ES.37034.15	chrX	+	4858	1	NIC	ENSMUSG00000067860.12	novel	3949	3	NA	NA	80	-612	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCTTTAAATTTTGG	9947	False	NA	NA	False	NA	NA	NA	57076449	57081307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_57076400_57081300
ES.37034.16	chrX	+	4537	2	NIC	ENSMUSG00000067860.12	novel	3949	3	NA	NA	244	75	intron_retention	FALSE	canonical	3	194	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAGAGAATTTCTGGTGC	NA	False	NA	9	True	AATAAA	-19	NA	57076613	57081994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_57078886_57079729
ES.37034.17	chrX	+	1133	3	NNC	ENSMUSG00000067860.12	novel	1951	3	NA	NA	839	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGATTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	57077208	57087094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57077598_57078721_57078886_57086514
ES.37034.18	chrX	+	2601	3	NNC	ENSMUSG00000067860.12	novel	3949	3	NA	NA	1409	-386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTTGTTTTGTGATA	NA	False	NA	NA	False	ATTAAA	-19	NA	57077778	57081533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57078412_57078721_57078886_57079729
ES.37034.2	chrX	+	4259	5	NNC	ENSMUSG00000067860.12	novel	2980	4	NA	NA	-3033	72	intron_retention	FALSE	canonical	0	0	junction_1	101.228701463567	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTAGAGAATTTCTGG	6467	False	NA	6	True	AATAAA	-16	NA	57072969	57081991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57073506_57073596_57073670_57076373_57077598_57078721_57078886_57079729
ES.37034.3	chrX	+	3302	5	NNC	ENSMUSG00000067860.12	novel	2980	4	NA	NA	-2534	-386	intron_retention	FALSE	canonical	0	0	junction_1	101.228701463567	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTTGTTTTGTGATA	6966	False	NA	NA	False	ATTAAA	-19	NA	57073468	57081533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_57073506_57073596_57073670_57076373_57077598_57078721_57078886_57079729
ES.37034.4	chrX	+	4419	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-393	-77	-393	77	multi-exon	FALSE	canonical	3	194	junction_2	9.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGAATTTCTGGTGCTT	9107	False	NA	11	True	AATAAA	-21	NA	57075609	57081996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57079729
ES.37034.5	chrX	+	2740	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-50	1259	-50	-1259	multi-exon	FALSE	canonical	3	194	junction_2	9.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGACTTTTTGTTTTGT	9450	False	NA	NA	False	NA	NA	NA	57075952	57080660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57079729
ES.37034.6	chrX	+	4422	2	ISM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-15	386	-15	-386	intron_retention	FALSE	canonical	3	213	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTTGTTTTGTGATA	9485	False	NA	NA	False	ATTAAA	-19	NA	57075987	57081533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_57077598_57078721
ES.37034.7	chrX	+	3576	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-13	386	-13	-386	multi-exon	FALSE	canonical	3	194	junction_2	9.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTTGTTTTGTGATA	9487	False	NA	NA	False	ATTAAA	-19	NA	57075989	57081533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57079729
ES.37034.8	chrX	+	4878	2	ISM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-11	-74	-11	74	intron_retention	FALSE	canonical	3	213	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAGAGAATTTCTGGTG	9489	False	NA	8	True	AATAAA	-18	NA	57075991	57081993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_57077598_57078721
ES.37034.9	chrX	+	2536	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	-10	1423	-10	-1423	multi-exon	FALSE	canonical	3	194	junction_2	9.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCGTTTGTAATTTAA	9490	False	NA	NA	False	AATACA	-17	NA	57075992	57080496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57077598_57078721_57078886_57079729
ES.37035.1	chrX	-	210	1	Intergenic	novelGene_30324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACATTTCAGCAACAAG	NA	False	NA	NA	False	NA	NA	NA	57104496	57104286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_57104300_57104500
ES.37036.1	chrX	-	166	1	Intergenic	novelGene_30325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTTGCATAATTT	NA	False	NA	NA	False	NA	NA	NA	57113113	57112947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_57112900_57113100
ES.37037.1	chrX	+	176	1	Intergenic	novelGene_30326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAATAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	57125885	57126061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_57125900_57126100
ES.37038.1	chrX	+	1548	1	Intergenic	novelGene_30327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGTGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	57446850	57448398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_57446800_57448400
ES.37039.1	chrX	+	1583	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	-5	-6	-5	6	multi-exon	FALSE	canonical	3	101	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTTTGTTCTTTGGA	NA	False	NA	19	True	AATAAA	-24	NA	57956815	57965670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57956922_57964193
ES.37039.2	chrX	+	4319	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	51	-2798	51	2798	multi-exon	FALSE	canonical	3	101	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGATTATCTTGGAA	NA	False	NA	NA	False	NA	NA	NA	57956871	57968462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_57956922_57964193
ES.3704.1	chr10	+	1101	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181615.8	1258	2	-1	158	-1	-158	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTTTATTTACAT	NA	False	NA	NA	False	TTTAAA	-29	NA	104029901	104032225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_104030009_104031231
ES.3704.2	chr10	+	1188	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	-24	33	-24	-33	multi-exon	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAAGTATTCTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	104030293	104032350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_104030363_104031231
ES.37040.1	chrX	+	189	1	Intergenic	novelGene_30328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATATTTTG	NA	False	NA	NA	False	NA	NA	NA	58167595	58167784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_58167600_58167800
ES.37041.1	chrX	-	4042	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-309	-1234	-309	1234	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCAAATACTGTTGCTT	NA	False	NA	NA	False	AATAAA	-27	NA	58180105	58106270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
ES.37041.2	chrX	-	2893	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	-388	-6	-388	6	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAATGTGTGTTTATTAT	NA	False	NA	NA	False	AATAAA	-31	NA	58180184	58107498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
ES.37041.3	chrX	-	2479	5	NNC	ENSMUSG00000031137.18	novel	2499	5	NA	NA	51	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.3841279652472	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCAATGTGTGTTTA	NA	False	NA	NA	False	AATAAA	-27	NA	58179745	58107502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_58109059_58112760_58112960_58171253_58171358_58177199_58177311_58179236
ES.37042.1	chrX	+	157	1	Intergenic	novelGene_30329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58986279	58986436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_58986300_58986400
ES.37043.1	chrX	-	179	1	Intergenic	novelGene_30330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAACTGGATTA	NA	False	NA	NA	False	NA	NA	NA	59040876	59040697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59040700_59040900
ES.37044.1	chrX	+	175	1	Intergenic	novelGene_30331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	59204828	59205003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59204800_59205000
ES.37045.1	chrX	+	6365	1	Intergenic	novelGene_30332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACATGGATAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	59213435	59219800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59213400_59219800
ES.37046.10	chrX	-	9881	25	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-55	0	intron_retention	FALSE	canonical	3	390	junction_24	56.068023541845	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224504	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.100	chrX	-	2981	9	NNC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	63316	-6	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	241.507990292247	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	5069	False	NA	-11	True	AATAAA	-20	NA	59129687	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218
ES.37046.101	chrX	-	4446	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-84	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	180.094340451177	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59224533	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.102	chrX	-	3973	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-84	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	149.082329679249	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59224533	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528_59223649_59223941_59224048_59224496
ES.37046.103	chrX	-	3501	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	180.441995138237	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59223619	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.104	chrX	-	4446	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	169	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	186.101630526605	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59224280	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833_59193037_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.105	chrX	-	3987	5	NNC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	79061	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	267.943090972691	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59113942	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112513
ES.37046.106	chrX	-	5482	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	-6	intron_retention	FALSE	canonical	0	0	junction_25	211.876267932958	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTGATACTCTGGTGT	NA	False	NA	-11	True	AATAAA	-20	NA	59224536	59101324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181684_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.107	chrX	-	6554	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	813	-14	intron_retention	FALSE	canonical	3	198	junction_26	80.4152315637754	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTTCCACAAATTGATAC	NA	False	NA	-19	True	AATAAA	-12	NA	59223636	59101332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.108	chrX	-	3487	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	-453	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	160.253544650742	788	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACTTGAAAATTGTT	NA	False	NA	NA	False	GATAAA	-21	NA	59224536	59101771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.11	chrX	-	5228	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	0	intron_retention	FALSE	canonical	3	198	junction_26	80.0515089354363	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223621	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.110	chrX	-	3625	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	142	460	142	-457	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTTTGACTTGAAAAT	NA	False	NA	NA	False	GATAAA	-17	NA	59224307	59101775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.111	chrX	-	3622	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	556	-459	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_27	79.0220750182634	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTTTTGACTTGAAA	NA	False	NA	NA	False	GATAAA	-15	NA	59223893	59101777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.112	chrX	-	3640	3	NNC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	83753	-2061	intron_retention	FALSE	canonical	0	0	junction_1	305.5	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAGGAGACCTACTATAA	NA	False	NA	NA	False	AAGAAA	-6	NA	59109250	59103379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59103847_59105206_59107583_59108453
ES.37046.113	chrX	-	3528	26	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	633	-3506	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	127.410831564667	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTTGTGTATATGTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	59223816	59104824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.114	chrX	-	3502	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-3509	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_14	150.073242292309	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTCTTTGTGTATATG	NA	False	NA	NA	False	AGTAAA	-14	NA	59223619	59104827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.115	chrX	-	4794	22	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-83	19520	-83	-19517	5prime_fragment	FALSE	canonical	3	390	junction_21	47.5624902227635	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTTTTTTTTGGTACT	NA	False	NA	NA	False	AATAAA	-28	NA	59224532	59120835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.117	chrX	-	4893	23	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-116	-19529	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	146.28854652014	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGAAAATCTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	59224565	59120847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.118	chrX	-	7117	22	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-59	-19912	intron_retention	FALSE	canonical	0	0	junction_18	179.505026174112	751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATCTGAGAGGTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	59224508	59121230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181684_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.119	chrX	-	4417	22	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-102	19916	-102	-19913	5prime_fragment	FALSE	canonical	3	390	junction_21	47.5624902227635	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTGAGAGGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59224551	59121231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.12	chrX	-	4219	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	615	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	150.29326773522	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223834	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.120	chrX	-	2690	18	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-18	53261	-18	-53258	5prime_fragment	FALSE	canonical	3	390	junction_17	50.101212439314	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTATTCTGTGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	59224467	59154576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.121	chrX	-	3388	15	ISM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	-234	56488	-234	-56485	5prime_fragment	FALSE	canonical	3	390	junction_14	50.407775963149	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCTACTTTGTTTT	NA	False	NA	0	True	NA	NA	NA	59224683	59157803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.122	chrX	-	2792	16	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	-56485	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_15	131.654429811111	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCTACTTTGTTTT	NA	False	NA	0	True	NA	NA	NA	59224536	59157803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.123	chrX	-	3289	16	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	-56485	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	177.057228664131	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCTACTTTGTTTT	NA	False	NA	0	True	NA	NA	NA	59224536	59157803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.124	chrX	-	3115	14	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-78	-56485	combination_of_known_splicesites	FALSE	canonical	3	25	junction_9	142.734619478363	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCTACTTTGTTTT	NA	False	NA	0	True	NA	NA	NA	59224527	59157803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.125	chrX	-	2765	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4627	-56487	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	140.27218439265	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTTCTACTTTGTT	NA	False	NA	-2	True	NA	NA	NA	59229076	59157805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59228955
ES.37046.126	chrX	-	2735	15	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-56487	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_14	93.2665972536004	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTTCTACTTTGTT	NA	False	NA	-2	True	NA	NA	NA	59223619	59157805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.127	chrX	-	2765	16	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	848	-56487	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	188.260056541182	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTTCTACTTTGTT	NA	False	NA	-2	True	NA	NA	NA	59223601	59157805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.128	chrX	-	4373	13	NNC	ENSMUSG00000031139.17	novel	3659	26	NA	NA	-84	-62284	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.860837000816	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTTATTCCGCTTTT	NA	False	NA	NA	False	NA	NA	NA	59224533	59163602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59164681_59165066_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.129	chrX	-	3330	14	NNC	ENSMUSG00000031139.17	novel	3659	26	NA	NA	830	-62943	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	167.643323826714	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTGTGCTTCTAAAGT	NA	False	NA	NA	False	ACTAAA	-3	NA	59223619	59164261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59164666_59165051_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.13	chrX	-	5487	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	592	0	intron_retention	FALSE	canonical	3	198	junction_26	80.1041112493813	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223857	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.131	chrX	-	2122	13	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-64537	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_12	100.320424141847	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGTTAGTAATTTTTG	NA	False	NA	NA	False	GATAAA	-5	NA	59223619	59165855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.132	chrX	-	2211	14	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-122	-64538	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_13	141.365069377964	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGAGTTAGTAATTTTT	NA	False	NA	NA	False	GATAAA	-4	NA	59224571	59165856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.133	chrX	-	2964	1	Intergenic	novelGene_30333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTCCAGGACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	59218986	59216022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59216000_59219000
ES.37046.134	chrX	-	2048	1	Genic_Genomic	ENSMUSG00000031139.17	novel	NA	NA	NA	NA	-72	-121155	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCCTGTGCACAAGTCG	NA	False	NA	NA	False	TTTAAA	-38	NA	59224521	59222473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_59222500_59224500
ES.37046.15	chrX	-	4263	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_18	111.145760951621	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224605	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.16	chrX	-	3717	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	806	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_22	124.869091214874	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223643	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.17	chrX	-	4555	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	186.728369423827	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224536	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59128345_59129348_59129396_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.18	chrX	-	4065	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.451288429363	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224527	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122649_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.19	chrX	-	4216	28	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	167.580466105174	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224507	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.20	chrX	-	7655	6	ISM	ENSMUSG00000031139.17	ENSMUST00000033478.5	3659	26	73962	-3	73962	0	3prime_fragment	FALSE	canonical	3	522	junction_5	39.6615682998038	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59119041	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514
ES.37046.21	chrX	-	4129	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	577	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	149.233530694926	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223872	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.22	chrX	-	3982	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	144.808670390996	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223619	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59214424_59214597_59223528
ES.37046.23	chrX	-	7856	26	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	0	intron_retention	FALSE	canonical	3	390	junction_25	52.4623445911446	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224536	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.24	chrX	-	4086	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_28	106.155564274939	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224757	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.25	chrX	-	6434	26	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	0	intron_retention	FALSE	canonical	3	28	junction_17	126.686978020632	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223619	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.26	chrX	-	4047	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	168	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	113.701797547058	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224281	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128333_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.27	chrX	-	6443	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	0	intron_retention	FALSE	canonical	3	25	junction_5	111.626357940149	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224532	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.28	chrX	-	4752	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-447	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	138.734807956675	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224896	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.29	chrX	-	3887	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-111	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	142.498603645146	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224560	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128343_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.3	chrX	-	5952	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-114	1	intron_retention	FALSE	canonical	3	21	junction_6	143.601653340934	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTTCGTGTATTT	NA	False	NA	-1	True	AATAAA	-30	NA	59224563	59101314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.30	chrX	-	3762	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	172.660734650183	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224042	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.31	chrX	-	4299	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	113.641845883471	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224532	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174770_59175411_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.32	chrX	-	3698	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	848	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	128.162208841561	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223601	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.33	chrX	-	6876	21	NIC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	12160	-1	intron_retention	FALSE	canonical	3	443	junction_9	49.3017241077835	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59180843	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738
ES.37046.34	chrX	-	4249	32	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4614	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	221.084329967857	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59229063	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111846_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833_59193037_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59228955
ES.37046.35	chrX	-	4303	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-116	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_23	166.363131005715	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224565	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.36	chrX	-	5633	28	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	57	-1	intron_retention	FALSE	canonical	3	25	junction_14	142.957455276751	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224392	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.38	chrX	-	3828	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4627	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_27	144.984886398378	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59229076	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59228955
ES.37046.39	chrX	-	5359	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	306	-1	intron_retention	FALSE	canonical	3	390	junction_26	54.8383854677548	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224143	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.4	chrX	-	4202	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	517	1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	148.257910963514	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTTCGTGTATTT	NA	False	NA	-1	True	AATAAA	-30	NA	59223932	59101314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.40	chrX	-	3606	4	NNC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	83236	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	277.489138926593	656	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59109767	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59107583_59108453
ES.37046.41	chrX	-	4045	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4630	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	170.809906722924	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59229079	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833_59193037_59198259_59198351_59200962_59201078_59205586_59205656_59228955
ES.37046.43	chrX	-	3585	26	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	828	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	183.456527820626	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223621	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107452_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.44	chrX	-	3689	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	124.493607402242	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223619	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.45	chrX	-	4116	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	593	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	181.267920966722	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223856	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.46	chrX	-	3936	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	204.32757966009	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223619	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112513_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.47	chrX	-	3747	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	831	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.491696993455	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223618	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59109953_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.49	chrX	-	3941	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-236	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_15	183.553817248595	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224685	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.5	chrX	-	3844	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4630	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_27	110.182004311385	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGTGTTCGTGTATTT	NA	False	NA	-1	True	AATAAA	-30	NA	59229079	59101314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59228955
ES.37046.50	chrX	-	5015	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-72	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	109.724345971008	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59224521	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.53	chrX	-	4115	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	572	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_15	149.744182368001	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59223877	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.54	chrX	-	3980	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4627	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	183.567008504189	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGGTGTTCGTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	59229076	59101316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107452_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59228955
ES.37046.56	chrX	-	5318	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	1	intron_retention	FALSE	canonical	3	35	junction_27	107.907799896317	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTCTGGTGTTCGTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	59224575	59101317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.57	chrX	-	3781	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-122	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_22	141.576146340477	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTCTGGTGTTCGTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	59224571	59101317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.58	chrX	-	4402	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-111	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	140.09717381962	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTCTGGTGTTCGTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	59224560	59101317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.59	chrX	-	4161	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	57	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	113.777247298146	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTCTGGTGTTCGTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	59224392	59101317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200969_59201078_59205586_59205656_59223941
ES.37046.60	chrX	-	3724	26	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	294	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	113.644399774032	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTCTGGTGTTCGTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	59224155	59101317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.61	chrX	-	4074	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-2986	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	169.29022283687	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59227435	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833_59193037_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59227386
ES.37046.63	chrX	-	4102	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	113.379704868175	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224405	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175519_59179026_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.64	chrX	-	6023	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-122	0	intron_retention	FALSE	canonical	3	35	junction_27	106.057054293583	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224571	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.65	chrX	-	4244	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-113	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	115.166107203989	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224562	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.66	chrX	-	4472	8	NNC	ENSMUSG00000031139.17	novel	3659	26	NA	NA	63386	0	intron_retention	FALSE	canonical	3	21	junction_5	255.815063940292	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	5139	False	NA	-5	True	AATAAA	-26	NA	59129617	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218
ES.37046.67	chrX	-	5410	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-118	0	intron_retention	FALSE	canonical	3	29	junction_7	162.303079270901	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224567	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.69	chrX	-	4031	31	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-946	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	196.26837918184	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59225395	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59225312
ES.37046.70	chrX	-	4488	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	141.043288332602	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224519	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.71	chrX	-	3742	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	141.297553511226	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224536	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.72	chrX	-	3337	12	NNC	ENSMUSG00000031139.17	novel	3659	26	NA	NA	37855	0	intron_retention	FALSE	canonical	3	8	junction_3	205.778987594791	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59155148	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115
ES.37046.75	chrX	-	4067	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-244	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_15	161.480111460038	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224693	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.76	chrX	-	3864	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	169.178066285925	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224548	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152903_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205590_59205656_59223941_59224048_59224496
ES.37046.77	chrX	-	4042	26	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_22	117.190743661776	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59224504	59101318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.78	chrX	-	5781	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-53	-1	intron_retention	FALSE	canonical	3	8	junction_3	141.932517437594	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224502	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.79	chrX	-	3927	30	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-87	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	160.774552088589	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224536	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.81	chrX	-	4018	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-105	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	142.185043990899	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224554	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154986_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.82	chrX	-	5396	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-387	-1	intron_retention	FALSE	non_canonical	0	0	junction_27	113.701797547058	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224836	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224677
ES.37046.84	chrX	-	3755	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	173.90234239756	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59223619	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59106131_59106198_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.86	chrX	-	5416	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-1	intron_retention	FALSE	canonical	3	21	junction_6	153.042997625128	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59223619	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59111797_59111992_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.87	chrX	-	3722	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4630	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_26	146.349145830125	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59229079	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59228955
ES.37046.88	chrX	-	4252	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	113.689249895661	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224504	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174682_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.89	chrX	-	3972	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	793	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	155.152508907875	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59223656	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59156727_59156857_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.9	chrX	-	7216	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-4630	0	intron_retention	FALSE	canonical	3	7	junction_27	145.413331703242	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59229079	59101315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59228955
ES.37046.90	chrX	-	4171	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-83	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	191.82021291522	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59224532	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ES.37046.91	chrX	-	3733	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	854	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.226155680284	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATACTCTGGTGTTCGTG	NA	False	NA	-6	True	AATAAA	-25	NA	59223595	59101319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59101959_59102007_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37046.92	chrX	-	3354	24	NNC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	11342	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.426083444804	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATACTCTGGTGTTCGT	NA	False	NA	-7	True	AATAAA	-24	NA	59181661	59101320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107452_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613
ES.37046.93	chrX	-	7184	2	NIC	ENSMUSG00000031139.17	novel	3671	25	NA	NA	83626	-4	intron_retention	FALSE	canonical	3	611	junction_1	0	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATACTCTGGTGTTC	NA	False	NA	-9	True	AATAAA	-22	NA	59109377	59101322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59107583_59108453
ES.37046.94	chrX	-	6744	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-70	-4	intron_retention	FALSE	canonical	3	25	junction_13	166.522167812919	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATACTCTGGTGTTC	NA	False	NA	-9	True	AATAAA	-22	NA	59224519	59101322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59110036_59112514_59112608_59122540_59122763_59128218_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
ES.37046.97	chrX	-	5363	5	ISM	ENSMUSG00000031139.17	ENSMUST00000033478.5	3659	26	78726	4	78726	-4	intron_retention	FALSE	canonical	3	564	junction_4	24.2590189414164	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATACTCTGGTGTTC	NA	False	NA	-9	True	AATAAA	-22	NA	59114277	59101322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956
ES.37046.99	chrX	-	3937	28	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	830	-5	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_13	124.794789029825	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGATACTCTGGTGTT	NA	False	NA	-10	True	AATAAA	-21	NA	59223619	59101323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158603_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
ES.37047.1	chrX	+	148	1	Intergenic	novelGene_30334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	59259524	59259672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59259500_59259700
ES.37048.1	chrX	+	181	1	Intergenic	novelGene_30337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATGGATCAA	NA	False	NA	NA	False	NA	NA	NA	59301306	59301487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59301300_59301500
ES.37049.1	chrX	+	180	1	Intergenic	novelGene_30338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGAGAGTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	59312676	59312856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59312700_59312900
ES.3705.1	chr10	-	176	1	Intergenic	novelGene_2819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTGAAGACTA	NA	False	NA	NA	False	NA	NA	NA	104212480	104212304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_104212300_104212500
ES.37050.1	chrX	+	2402	1	Intergenic	novelGene_30339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCTTGGGAAACATTT	NA	False	NA	NA	False	AATAAA	-18	NA	59375175	59377577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59375200_59377600
ES.37051.11	chrX	-	5856	29	NNC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-862	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	33.9306578305863	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	59450034	59268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59281731_59281798_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59449961
ES.37051.12	chrX	-	4713	7	ISM	ENSMUSG00000062949.14	ENSMUST00000133295.8	1154	10	17324	-2336	17324	3	3prime_fragment	FALSE	canonical	3	14	junction_1	32.968419232148	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	59294866	59268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248
ES.37051.13	chrX	-	5873	28	NIC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_26	25.3101475011406	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTATTCGAGTGTCTT	NA	False	NA	-6	True	AATAAA	-15	NA	59449192	59268648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59366793_59366914_59448995
ES.37051.15	chrX	-	6038	29	NIC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_22	20.1540938769273	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	-7	True	AATAAA	-14	NA	59449214	59268649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.17	chrX	-	5838	30	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-856	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_29	25.2027686605451	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	-7	True	AATAAA	-14	NA	59450028	59268649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449095_59449961
ES.37051.18	chrX	-	5924	30	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-849	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_29	24.3517622242107	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	-7	True	AATAAA	-14	NA	59450021	59268649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449095_59449961
ES.37051.2	chrX	-	6038	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-850	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_30	19.765879692035	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGAGTGTCTTGTTTTTA	NA	False	NA	1	True	AATAAA	-22	NA	59450022	59268641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449095_59449961
ES.37051.20	chrX	-	5910	28	NIC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_21	24.9558182983651	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGGTATTCGAGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	59449192	59268650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.21	chrX	-	5879	29	NNC	ENSMUSG00000062949.14	novel	6039	30	NA	NA	-850	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	26.1297781491242	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGGTATTCGAGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	59450022	59268650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59449961
ES.37051.24	chrX	-	12119	29	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	31.0665841872135	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGGTATTCGAGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	59449174	59268650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59277511_59281974_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315269_59322005_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337275_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.25	chrX	-	6031	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-766	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	20.2079192397436	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGGGTATTCGAGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	59449938	59268651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449095_59449874
ES.37051.27	chrX	-	6166	30	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-54	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.1763741243265	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGGGTATTCGAGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	59449226	59268651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59292764_59292883_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.28	chrX	-	5613	25	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-69	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	31.9352371996827	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGGGTATTCGAGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	59449241	59268651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336056_59337678_59337744_59340548_59340653_59355100_59355166_59366793_59366914_59448995
ES.37051.31	chrX	-	6072	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-850	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	20.2079192397436	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATGGGTATTCGAGTG	NA	False	NA	-10	True	AATAAA	-11	NA	59450022	59268652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449068_59449889
ES.37051.34	chrX	-	6300	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-798	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	35.7818234427606	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACAATGGGTATTCGAG	NA	False	NA	-12	True	AATAAA	-9	NA	59449970	59268654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59281731_59281798_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322146_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337275_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449095_59449595
ES.37051.35	chrX	-	3794	30	FSM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	-62	2312	-62	18	multi-exon	FALSE	canonical	3	63	junction_14	11.609582331096	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTACAGTTATTGTAAG	NA	False	NA	NA	False	AATAAA	-32	NA	59449234	59270964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.37	chrX	-	3626	29	NNC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	29.7302498324861	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAATAACTCTCTTAAC	NA	False	NA	NA	False	AATAAA	-13	NA	59449201	59270983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288252_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324219_59325387_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.38	chrX	-	1076	1	Intergenic	novelGene_30335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCGAATCTTGAACTG	NA	False	NA	NA	False	AATAAA	-31	NA	59272231	59271155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59271200_59272200
ES.37051.39	chrX	-	3512	28	NNC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	2	-919	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.1274790349055	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGTGGTAAGTAGATTC	NA	False	NA	NA	False	AGTAAA	-16	NA	59449170	59281739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59282071_59283829_59283934_59286132_59286199_59288121_59288149_59290515_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.40	chrX	-	3635	28	NNC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-18	-921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	21.1565462990337	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAGGTGGTAAGTAGAT	NA	False	NA	NA	False	AGTAAA	-14	NA	59449190	59281741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337275_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.41	chrX	-	177	1	Intergenic	novelGene_30336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	59283105	59282928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59282900_59283100
ES.37051.42	chrX	-	2221	8	NIC	ENSMUSG00000062949.14	novel	5939	29	NA	NA	-15	-56800	intron_retention	FALSE	canonical	3	81	junction_7	9.79795897113271	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGCATGCTAAAAGTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	59449187	59337620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.43	chrX	-	4500	1	Intergenic	novelGene_30340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59409466	59404966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59405000_59409500
ES.37051.5	chrX	-	6165	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-46	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	25.2654573149455	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCGAGTGTCTTGTTTT	NA	False	NA	-1	True	AATAAA	-20	NA	59449218	59268643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281731_59281798_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ES.37051.7	chrX	-	5831	28	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	20.9407027472831	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	59449175	59268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59355108_59355166_59366793_59366914_59448995
ES.37051.8	chrX	-	5926	30	NNC	ENSMUSG00000062949.14	novel	6039	30	NA	NA	-842	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	20.4860673050402	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	59450014	59268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59449961
ES.37051.9	chrX	-	6006	31	NNC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	-850	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_30	19.6196047077633	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTCGAGTGTCTTGT	NA	False	NA	-4	True	AATAAA	-17	NA	59450022	59268646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995_59449068_59449961
ES.37052.1	chrX	+	170	1	Intergenic	novelGene_30341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	59517076	59517246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59517100_59517200
ES.37053.1	chrX	+	1529	8	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71547	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.24890659167824	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	59529786	59851553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59672601_59672728_59723839_59723918_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.10	chrX	+	4619	9	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	713	-156037	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.58113883008419	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAACTTGGAGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	59602046	59695562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59602084_59607158_59607236_59613279_59613375_59615242_59615312_59672601_59672728_59687417_59687574_59690534_59690685_59690758_59690869_59691763
ES.37053.11	chrX	+	499	1	Intergenic	novelGene_30342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATTGTATATTTCTATA	NA	False	NA	NA	False	NA	NA	NA	59648420	59648919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59648400_59648900
ES.37053.12	chrX	+	194	1	Intergenic	novelGene_30344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGAGTTACTTATTCT	NA	False	NA	NA	False	NA	NA	NA	59768548	59768742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59768500_59768700
ES.37053.13	chrX	+	6389	1	Intergenic	novelGene_30346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCACATGCTATTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	59806424	59812813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_59806400_59812800
ES.37053.14	chrX	+	6317	1	FSM	ENSMUSG00000081891.2	ENSMUST00000119809.2	575	1	-6178	436	-6178	-436	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATCCCTGAGTC	NA	False	NA	NA	False	AATAAA	-23	NA	59855635	59861952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_59855600_59862000
ES.37053.2	chrX	+	2216	10	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71539	485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.66666666666667	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGGTCAGGGTATTT	NA	False	NA	NA	False	NA	NA	NA	59529794	59852084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59613279_59613375_59615242_59615312_59672601_59672728_59723839_59723918_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.3	chrX	+	1911	11	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71529	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.33704968844029	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATTGTCTGGAGTCTC	NA	False	NA	NA	False	NA	NA	NA	59529804	59851597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59613279_59613375_59615242_59615312_59652900_59653033_59723839_59723918_59789032_59789219_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.4	chrX	+	2135	13	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71528	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.40328160454097	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGTCTCAGGTACG	NA	False	NA	NA	False	NA	NA	NA	59529805	59851604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59613279_59613375_59615242_59615312_59672601_59672728_59723839_59723918_59821860_59821962_59822590_59822677_59825486_59825710_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.5	chrX	+	3943	9	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71528	2222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.9180788932265	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATTTGCTTTAGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	59529805	59853821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59658333_59658439_59723839_59723918_59789032_59789219_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.6	chrX	+	2597	10	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71528	877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.66666666666667	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTTAAATTAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59529805	59852476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59613279_59613375_59615242_59615312_59672601_59672728_59723839_59723918_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.7	chrX	+	2766	10	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71523	34881	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.94662873101157	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAACAAACAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59529810	59886480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59672601_59672728_59723839_59723918_59847242_59847346_59850088_59850175_59850727_59851425_59853052_59853132_59884112_59884261_59885212
ES.37053.8	chrX	+	3094	10	NNC	ENSMUSG00000067835.5	novel	2051	12	NA	NA	-71521	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.89897948556636	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGTCTCAGGTACG	NA	False	NA	NA	False	NA	NA	NA	59529812	59851604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_59529869_59533307_59533431_59672592_59672728_59723839_59723918_59821218_59822677_59825486_59825560_59843031_59843137_59847242_59847346_59850088_59850175_59850727
ES.37053.9	chrX	+	1368	1	FSM	ENSMUSG00000082226.5	ENSMUST00000117865.3	1210	1	-164	6	-164	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTGACCTTATTTT	2161	False	NA	NA	False	NA	NA	NA	59591449	59592817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_59591400_59592800
ES.37054.1	chrX	-	3665	1	Intergenic	novelGene_30343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACCAAACCAAACCAA	NA	False	NA	NA	False	ACTAAA	-30	NA	59741169	59737504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59737500_59741200
ES.37055.1	chrX	-	177	1	Intergenic	novelGene_30345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCAGCTCAAAATTA	NA	False	NA	NA	False	NA	NA	NA	59796562	59796385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59796400_59796600
ES.37056.1	chrX	-	206	2	Intergenic	novelGene_30347	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAATGGCCATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59903928	59901649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_59901675_59903747
ES.37057.1	chrX	-	2152	1	FSM	ENSMUSG00000045179.10	ENSMUST00000135107.4	2065	1	-91	4	-91	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTGGAGTCCTGATA	NA	False	NA	-4	True	AATAAA	-11	NA	59937127	59934975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_59935000_59937100
ES.37058.1	chrX	+	176	1	Intergenic	novelGene_30348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTGGGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	60627670	60627846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_60627700_60627800
ES.37059.1	chrX	-	177	1	Intergenic	novelGene_30349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	60735873	60735696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_60735700_60735900
ES.3706.1	chr10	-	5659	1	Intergenic	novelGene_2820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	104836885	104831226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_104831200_104836900
ES.37060.1	chrX	+	1447	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAGCAGCAAACTGTT	NA	False	NA	1	True	AATAAA	-14	NA	60753102	60754549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_60753100_60754500
ES.37061.1	chrX	-	1581	1	Intergenic	novelGene_30350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCATACACTAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	60758744	60757163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_60757200_60758700
ES.37062.1	chrX	+	988	3	Intergenic	novelGene_30351	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTACACTGGCTTCTGT	NA	False	NA	NA	False	TTTAAA	-18	NA	61223371	61224928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_61223520_61223860_61223947_61224174
ES.37062.2	chrX	+	2222	4	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-75278	362	multi-exon	FALSE	canonical	1	1	junction_1	12.4988888395018	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTTGTGTGGCTTAC	NA	False	NA	NA	False	AATAAA	-10	NA	61223375	61300115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_61223520_61223860_61223947_61249243_61249365_61298244
ES.37062.3	chrX	+	2504	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57688	364	multi-exon	FALSE	canonical	2	5	junction_1	12.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTGGCTTACTA	NA	False	NA	NA	False	AATAAA	-12	NA	61240965	61300117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_61241476_61249243_61249365_61298244
ES.37062.4	chrX	+	2269	3	Genic_Genomic	ENSMUSG00000083576.2	novel	1100	1	NA	NA	-57665	364	multi-exon	FALSE	canonical	2	4	junction_1	13	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTGGCTTACTA	NA	False	NA	NA	False	AATAAA	-12	NA	61240988	61300117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_61241264_61249243_61249365_61298244
ES.37063.1	chrX	+	1933	4	FSM	ENSMUSG00000045330.9	ENSMUST00000051414.2	1970	4	39	-2	39	2	multi-exon	FALSE	canonical	1	3	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCTTTTCTGTTTGGAA	NA	False	NA	NA	False	AATAAA	-23	NA	61330786	61335686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_61330842_61332956_61333046_61333767_61333841_61333970
ES.37064.1	chrX	-	709	3	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-4855	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	14.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61564530	61554144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_61554605_61558040_61558144_61564384
ES.37064.2	chrX	-	672	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-24879	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	23.2522400354604	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61595496	61554144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61595457
ES.37064.3	chrX	-	691	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-26391	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	21.9241115365405	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61597008	61554144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_61554605_61558040_61558144_61575716_61575786_61596949
ES.37064.4	chrX	-	676	4	NNC	ENSMUSG00000085757.8	novel	594	3	NA	NA	-22639	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.6126143312331	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61593256	61554144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_61554605_61558040_61558144_61591628_61591699_61593213
ES.37065.1	chrX	-	4849	1	Intergenic	novelGene_30352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTTCTGTGTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	61674397	61669548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_61669500_61674400
ES.37065.2	chrX	-	4451	1	Intergenic	novelGene_30353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGGAAGTCAAAATA	NA	False	NA	NA	False	NA	NA	NA	61674673	61670222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_61670200_61674700
ES.37066.1	chrX	-	220	1	Intergenic	novelGene_30354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATTTCTTCATAGCTT	NA	False	NA	NA	False	NA	NA	NA	62977545	62977325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_62977300_62977500
ES.37067.1	chrX	+	1653	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	-2	-2	-2	2	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTAGTCTCCCGTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	63217151	63222386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
ES.37068.1	chrX	+	286	1	Intergenic	novelGene_30355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	63542208	63542494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63542200_63542500
ES.37069.1	chrX	+	5282	1	Intergenic	novelGene_30356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCGTTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	63976925	63982207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63976900_63982200
ES.37069.10	chrX	+	3743	2	Intergenic	novelGene_30365	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63978205	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63981640_63981890
ES.37069.2	chrX	+	3827	2	Intergenic	novelGene_30357	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63977023	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63979783_63981131
ES.37069.3	chrX	+	1026	2	Intergenic	novelGene_30358	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63977044	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977270_63981398
ES.37069.4	chrX	+	4756	2	Intergenic	novelGene_30359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	63977044	63982204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977270_63977673
ES.37069.5	chrX	+	3894	2	Intergenic	novelGene_30364	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGTTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	63977045	63982203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63979794_63981057
ES.37069.6	chrX	+	5107	2	Intergenic	novelGene_30361	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63977045	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977469_63977515
ES.37069.7	chrX	+	1102	3	Intergenic	novelGene_30362	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63977045	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977270_63977673_63977765_63981412
ES.37069.8	chrX	+	5108	2	Intergenic	novelGene_30363	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	54	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	63977045	63982199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977458_63977503
ES.37069.9	chrX	+	4698	2	Intergenic	novelGene_30360	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	63977045	63982198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_63977413_63977867
ES.3707.1	chr10	+	173	1	Intergenic	novelGene_2821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAACTGAAAACA	NA	False	NA	NA	False	NA	NA	NA	105394883	105395056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_105394900_105395100
ES.37070.1	chrX	+	942	3	FSM	ENSMUSG00000031181.3	ENSMUST00000033524.3	854	3	-94	6	-94	-6	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCATTGAGTTACTG	NA	False	NA	NA	False	NA	NA	NA	64091155	64092614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_64091683_64092028_64092158_64092328
ES.37071.1	chrX	-	5342	1	Intergenic	novelGene_30366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTCTTTTTGGACTGT	NA	False	NA	NA	False	AATAAA	-18	NA	65817722	65812380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_65812400_65817700
ES.37072.1	chrX	-	3362	13	Intergenic	novelGene_30367	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTCTCCTTGTTTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	65919768	65838205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_65838401_65840043_65840179_65854941_65855222_65894018_65894130_65895823_65895959_65896180_65897951_65914847_65915004_65915426_65915487_65915709_65915829_65916877_65917011_65917469_65917531_65918631_65918742_65919671
ES.37073.1	chrX	-	1712	9	NNC	ENSMUSG00000079578.2	novel	782	8	NA	NA	-918	717	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_8	9.82264602843857	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGAAATTATCAAATTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	66738086	66725788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059_66737213_66737917
ES.37074.1	chrX	+	1698	10	NNC	ENSMUSG00000079577.2	novel	782	8	NA	NA	-1175	679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0413153507362	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAATATGTCAATTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	66738128	66750635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_66738194_66738428_66738557_66739259_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ES.37074.2	chrX	+	2396	9	NNC	ENSMUSG00000079577.2	novel	782	8	NA	NA	-883	44268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.4878012485479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAACATTACAC	NA	False	NA	NA	False	NA	NA	NA	66738420	66794224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810_66750666_66794202
ES.37074.3	chrX	+	1717	9	NNC	ENSMUSG00000079577.2	novel	782	8	NA	NA	-875	677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7727168473706	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAATATGTCAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	66738428	66750633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_66738646_66739259_66739413_66739883_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ES.37074.4	chrX	+	3995	9	NNC	ENSMUSG00000079577.2	novel	782	8	NA	NA	-864	3052	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	9.9365172470036	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTGAGTCTTATGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	66738439	66753008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_66738557_66739259_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ES.37074.5	chrX	+	2301	8	FSM	ENSMUSG00000079577.2	ENSMUST00000114672.2	782	8	-842	-677	-842	677	multi-exon	FALSE	canonical	3	52	junction_3	6.1842459491181	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAATATGTCAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	66738461	66750633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ES.37075.1	chrX	+	3568	1	Intergenic	novelGene_30368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	67075241	67078809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_67075200_67078800
ES.37076.1	chrX	+	160	1	Intergenic	novelGene_30369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	67407736	67407896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_67407700_67407900
ES.37077.1	chrX	+	159	1	Intergenic	novelGene_30370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	67637537	67637696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_67637500_67637700
ES.37078.1	chrX	+	3642	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	-38	-769	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	1105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAATGTTGATTTCTAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	67722108	67760800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.10	chrX	+	4273	15	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	-5	-6	multi-exon	FALSE	canonical	3	47	junction_3	235.001128959511	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATACTAGTCTGACAG	NA	False	NA	14	True	ATTAAA	-20	NA	67722141	67761563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.100	chrX	+	2484	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	165	1760	82	-1760	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTATGATCTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	67722311	67759809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.102	chrX	+	4152	17	NIC	ENSMUSG00000000838.18	novel	4199	17	NA	NA	86	-64	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	240.482774526056	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67722315	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759119
ES.37078.103	chrX	+	2974	8	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	86	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	352.909018743081	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722315	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67754362_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.105	chrX	+	4200	18	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	-84	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	266.009717022091	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTGTTTATCTTATC	NA	False	NA	32	True	ATTAAA	-13	NA	67722323	67761503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755024_67755134_67755911_67756020_67756846_67756930_67759170
ES.37078.106	chrX	+	3703	16	NIC	ENSMUSG00000000838.18	novel	4199	17	NA	NA	-60	-493	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	238.628823815472	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722347	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759119
ES.37078.107	chrX	+	8872	14	NNC	ENSMUSG00000000838.18	novel	4076	16	NA	NA	-11	-11	intron_retention	FALSE	canonical	0	0	junction_13	220.768721521793	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722396	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67751735_67754189_67756020_67756846_67757605_67759170
ES.37078.108	chrX	+	4090	16	ISM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	9739	-6	-6518	6	3prime_fragment	FALSE	canonical	3	466	junction_13	129.765018398642	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACAGATGTTTGCTCCG	NA	False	NA	26	True	ATTAAA	-32	NA	67731885	67761575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.11	chrX	+	4238	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	1	-11	multi-exon	FALSE	canonical	0	0	junction_4	264.159547748452	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722147	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738671_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.110	chrX	+	3825	13	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	689	-4	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_10	180.98916097073	1108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	16	True	ATTAAA	-22	NA	67739092	67761565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.111	chrX	+	3766	12	NNC	ENSMUSG00000000838.18	novel	4076	16	NA	NA	689	0	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_9	212.338611539242	1108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67739092	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.112	chrX	+	5706	8	NIC	ENSMUSG00000000838.18	novel	4076	16	NA	NA	251	-64	intron_retention	FALSE	canonical	3	289	junction_5	176.052635913936	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67741518	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67756930_67759170
ES.37078.113	chrX	+	2528	9	NIC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	2450	-785	combination_of_known_junctions	FALSE	canonical	3	204	junction_6	233.254153232049	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTATTGCCAAACAGT	NA	False	NA	NA	False	ATTAAA	-10	NA	67743717	67760784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.114	chrX	+	3365	6	ISM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	26902	64	-6408	-64	3prime_fragment	FALSE	canonical	3	466	junction_3	160.209862368083	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67749048	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.115	chrX	+	9493	2	NIC	ENSMUSG00000000838.18	novel	4257	16	NA	NA	-5621	0	intron_retention	FALSE	canonical	3	890	junction_1	0	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67749835	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67756930_67759170
ES.37078.12	chrX	+	3879	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	1	-493	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722147	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.13	chrX	+	4315	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	214.122400378265	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722147	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754329_67755872_67756020_67756846_67756930_67759170
ES.37078.14	chrX	+	5788	15	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	289	junction_11	149.691110529078	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722155	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.15	chrX	+	3288	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	9	1112	9	-1112	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCTTTTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	67722155	67760457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.16	chrX	+	4301	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	9	0	multi-exon	FALSE	canonical	3	169	junction_13	205.444883119536	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722155	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.17	chrX	+	6331	15	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	9	0	intron_retention	FALSE	canonical	3	568	junction_11	95.0619830018546	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722155	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.18	chrX	+	4262	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	9	0	multi-exon	FALSE	non_canonical	0	0	junction_14	241.83285320421	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722155	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67755941_67756842_67756930_67759170
ES.37078.19	chrX	+	3907	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	9	493	9	-493	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722155	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.2	chrX	+	4375	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-299	0	27	0	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722117	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.21	chrX	+	3630	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	14	765	14	-765	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTGATTTCTAGTTATT	NA	False	NA	NA	False	ATTAAA	-30	NA	67722160	67760804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.22	chrX	+	7732	14	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	18	-66	intron_retention	FALSE	canonical	3	568	junction_10	96.133597868036	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATTGTTTATCTTATC	NA	False	NA	32	True	ATTAAA	-13	NA	67722164	67761503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.23	chrX	+	3786	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	-10	-493	multi-exon	FALSE	canonical	3	169	junction_13	205.444883119536	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722177	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.24	chrX	+	4351	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	-5	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	217.560973852734	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722182	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738630_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.25	chrX	+	3817	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-234	493	-5	-493	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722182	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.26	chrX	+	4237	18	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	-4	-11	multi-exon	FALSE	non_canonical	0	0	junction_1	239.217626157355	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722183	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722296_67722344_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.28	chrX	+	2547	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-231	1760	-2	-1760	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTATGATCTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	67722185	67759809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.29	chrX	+	4227	18	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	0	-12	multi-exon	FALSE	non_canonical	0	0	junction_1	285.271278649193	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGCAAAATACTAGTC	NA	False	NA	8	True	ATTAAA	-14	NA	67722187	67761557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722299_67722350_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743667_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.3	chrX	+	4362	17	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114653.2	4058	17	-294	-10	-18	10	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGTTTGCTCCGGTTT	NA	False	NA	30	True	ATTAAA	-36	NA	67722128	67761579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.30	chrX	+	3800	17	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114653.2	4058	17	-235	493	0	-493	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722187	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.31	chrX	+	3809	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	0	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.403716879897	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGTTGATGCAATC	NA	False	NA	16	True	AATAAA	-19	NA	67722187	67761073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722297_67722359_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.32	chrX	+	3538	15	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	0	-496	multi-exon	FALSE	canonical	2	21	junction_12	240.733064125527	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGTTGATGCAATC	NA	False	NA	16	True	AATAAA	-19	NA	67722187	67761073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67755911_67756020_67756846_67756930_67759170
ES.37078.35	chrX	+	4419	17	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114655.8	4199	17	-220	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	216.208440731971	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759119
ES.37078.36	chrX	+	5817	16	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	496	junction_11	115.067979907531	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.38	chrX	+	4280	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4257	16	NA	NA	2	-11	multi-exon	FALSE	canonical	0	0	junction_9	244.572188843203	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722189	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747280_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.39	chrX	+	4350	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	244.451298830667	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTAGTCTGACAGAT	NA	False	NA	16	True	ATTAAA	-22	NA	67722189	67761565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759146
ES.37078.4	chrX	+	4388	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722131	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.40	chrX	+	3732	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	-496	multi-exon	FALSE	canonical	3	204	junction_13	199.338461472497	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGTTGATGCAATC	NA	False	NA	16	True	AATAAA	-19	NA	67722189	67761073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.41	chrX	+	4234	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	236.815295905902	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722189	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67755926_67755983_67756020_67756846_67756930_67759170
ES.37078.42	chrX	+	4118	17	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	-64	multi-exon	FALSE	non_canonical	0	0	junction_1	259.620395963029	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67722189	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722296_67722341_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.43	chrX	+	4184	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.815295905902	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67722189	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.44	chrX	+	3127	7	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4257	16	NA	NA	2	0	multi-exon	FALSE	canonical	3	18	junction_4	319.232934808842	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755872_67756020_67756846_67756930_67759170
ES.37078.47	chrX	+	3088	7	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	0	multi-exon	FALSE	canonical	3	49	junction_4	307.710587330946	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755911_67756020_67756846_67756930_67759170
ES.37078.48	chrX	+	4211	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.406732384793	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67722189	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.49	chrX	+	4031	16	FSM	ENSMUSG00000000838.18_ENSMUSG00002075986.1	ENSMUST00000114657.9	4076	16	-227	272	2	-272	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTCTCTTTTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	67722189	67761297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.5	chrX	+	4424	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	-15	0	-15	0	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722131	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.50	chrX	+	4219	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	0	multi-exon	FALSE	canonical	3	47	junction_3	236.940911527654	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.51	chrX	+	2961	6	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	2	0	multi-exon	FALSE	canonical	3	10	junction_3	346.488325921668	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735141_67755911_67756020_67756846_67756930_67759170
ES.37078.54	chrX	+	3798	16	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	-496	combination_of_known_splicesites	FALSE	canonical	3	47	junction_3	211.068982931068	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGTTGATGCAATC	NA	False	NA	16	True	AATAAA	-19	NA	67722189	67761073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.55	chrX	+	4251	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	2	-6	multi-exon	FALSE	non_canonical	0	0	junction_11	220.112658023618	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATACTAGTCTGACAG	NA	False	NA	14	True	ATTAAA	-20	NA	67722189	67761563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748950_67751656_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.56	chrX	+	4418	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	263.964517380625	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67723257_67723310_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.57	chrX	+	4309	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	219.409639359236	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722189	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67755956_67756839_67756930_67759170
ES.37078.58	chrX	+	3506	17	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	3	-785	multi-exon	FALSE	non_canonical	0	0	junction_10	246.533941628734	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTATTGCCAAACAGT	NA	False	NA	NA	False	ATTAAA	-10	NA	67722190	67760784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748853_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.59	chrX	+	3778	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	6	-493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.406732384793	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722193	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.6	chrX	+	4281	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	-10	0	multi-exon	FALSE	canonical	3	204	junction_13	199.338461472497	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722136	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.61	chrX	+	4188	16	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	10	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	219.958016196021	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722197	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67755966_67759192
ES.37078.62	chrX	+	4147	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	18	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.674448598551	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGATGTAAATTTTTAT	NA	False	NA	-29	True	ATTAAA	-30	NA	67722205	67761520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37078.63	chrX	+	5240	15	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	18	-491	intron_retention	FALSE	canonical	0	0	junction_12	244.992305168625	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGATGCAATCCTTAC	NA	False	NA	21	True	AATAAA	-24	NA	67722205	67761078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754196_67756020_67756846_67756930_67759170
ES.37078.64	chrX	+	2707	11	FSM	ENSMUSG00000000838.18	ENSMUST00000146177.8	2870	11	33	130	-9	-130	multi-exon	FALSE	canonical	3	696	junction_8	82.2352722376475	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTTGGAAAGCATGTAT	NA	False	NA	NA	False	ATTAAA	-34	NA	67722220	67750369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854
ES.37078.66	chrX	+	4187	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	80	142	-3	-142	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTGTGCAAAATGT	NA	False	NA	-44	True	NA	NA	NA	67722226	67761427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.67	chrX	+	3985	15	NIC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	2	21	junction_12	240.733064125527	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATACTAGTCTGACAG	NA	False	NA	14	True	ATTAAA	-20	NA	67722230	67761563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67755911_67756020_67756846_67756930_67759170
ES.37078.69	chrX	+	3931	14	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	9	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	265.446169004288	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTTATCTTATCTA	NA	False	NA	34	True	ATTAAA	-15	NA	67722238	67761505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722435_67738617_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.7	chrX	+	4360	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	215.403716879897	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722140	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.72	chrX	+	3643	17	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	11	-491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.620395963029	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGATGCAATCCTTAC	NA	False	NA	21	True	AATAAA	-24	NA	67722240	67761078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722296_67722338_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.73	chrX	+	3973	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	281.167511548139	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170_67759556_67759694_67759807_67759946
ES.37078.74	chrX	+	8690	14	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	11	-11	intron_retention	FALSE	canonical	3	568	junction_11	98.6170046668801	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722240	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67749530_67751647_67756020_67756846_67756930_67759170
ES.37078.75	chrX	+	4044	16	NIC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_13	216.172523693461	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67755911_67756020_67756846_67756930_67759170
ES.37078.76	chrX	+	4077	16	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	325.4984280556	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67755911_67756020_67756846_67756930_67757273_67757370_67759170
ES.37078.77	chrX	+	4430	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	263.996683946879	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67734522_67734638_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.78	chrX	+	4231	16	NNC	ENSMUSG00000000838.18	novel	4076	16	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	241.012272624353	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738671_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ES.37078.79	chrX	+	4098	18	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.217626157355	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722240	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722266_67722407_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.8	chrX	+	8464	14	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	696	junction_8	78.8602989187977	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722140	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.83	chrX	+	5198	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	28	-496	intron_retention	FALSE	non_canonical	0	0	junction_1	214.122400378265	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGTTGATGCAATC	NA	False	NA	16	True	AATAAA	-19	NA	67722257	67761073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722292_67722346_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.85	chrX	+	7177	1	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	29	5744	mono-exon	FALSE	NA	NA	NA	NA	NA	908	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGAACTAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	67722258	67729435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722300_67729400
ES.37078.87	chrX	+	2523	7	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	30	-495	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	307.710587330946	1109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATGTTGATGCAATCC	NA	False	NA	17	True	AATAAA	-20	NA	67722259	67761074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755911_67756020_67756846_67756930_67759170
ES.37078.88	chrX	+	4162	16	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	30	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	308.18245677953	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722259	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67739092_67739244_67741273_67741368_67741453_67741571_67743647_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ES.37078.89	chrX	+	5253	16	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	31	-493	intron_retention	FALSE	canonical	3	496	junction_11	115.067979907531	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGCAATCCTT	NA	False	NA	19	True	AATAAA	-22	NA	67722260	67761076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
ES.37078.91	chrX	+	4063	16	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	56	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	220.625111897989	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722285	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67755836_67756020_67756846_67756930_67759170
ES.37078.92	chrX	+	2882	6	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	350.079191041113	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722286	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735159_67755911_67756020_67756846_67756930_67759170
ES.37078.93	chrX	+	2760	8	NNC	ENSMUSG00000000838.18	novel	4257	16	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	392.653557638958	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722292	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755920_67756020_67756846_67756930_67759170_67760967_67761182
ES.37078.95	chrX	+	8156	15	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	65	-11	intron_retention	FALSE	canonical	3	496	junction_11	119.077063025486	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAAATACTAGTCT	NA	False	NA	9	True	ATTAAA	-15	NA	67722294	67761558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67756020_67756846_67756930_67759170
ES.37078.96	chrX	+	4296	18	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	65	-65	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	265.715134819175	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGTTTATCTTATCT	NA	False	NA	33	True	ATTAAA	-14	NA	67722294	67761504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755024_67755125_67755836_67756020_67756846_67756930_67759170
ES.37078.99	chrX	+	4122	16	NNC	ENSMUSG00000000838.18	novel	4076	16	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	311.589730254384	1112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722309	67761569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67722474_67731887_67731941_67735125_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743953_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
ES.37079.2	chrX	+	799	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	-4	4	-4	-4	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCTGGATTCTTTTTGT	NA	False	NA	23	True	ATTAAA	-23	NA	67805440	67848169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
ES.37079.4	chrX	+	702	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	-27	4	15	-4	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCTGGATTCTTTTTGT	NA	False	NA	23	True	ATTAAA	-23	NA	67805459	67848169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
ES.37079.5	chrX	+	900	6	FSM	ENSMUSG00000062170.13	ENSMUST00000071848.7	842	6	-67	9	-14	-9	multi-exon	FALSE	canonical	3	35	junction_2	319.056484027515	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAATCTGGATTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	67805472	67848164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67805838_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
ES.37079.6	chrX	+	720	5	NNC	ENSMUSG00000062170.13	novel	799	5	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	309.972881878399	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAATCTGGATTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	67805486	67848164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67805810_67807537_67807616_67815650_67815748_67847210_67847300_67848031
ES.37079.7	chrX	+	4065	4	NNC	ENSMUSG00000062170.13	novel	842	6	NA	NA	6155	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	357.063330828331	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAAATCAGAATCTGGA	NA	False	NA	13	True	ATTAAA	-13	NA	67811694	67848159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_67814384_67814588_67815748_67847210_67847300_67848031
ES.37079.8	chrX	+	5036	2	Genic_Genomic	ENSMUSG00000062170.13	novel	799	5	NA	NA	37091	-11	multi-exon	FALSE	non_canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATCAGAATCTGGATTC	NA	False	NA	16	True	ATTAAA	-16	NA	67842630	67848162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_67843431_67843926
ES.3708.1	chr10	+	3973	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	18	323	18	-323	multi-exon	FALSE	canonical	3	411	junction_2	58.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGCTGTACTAACATT	NA	False	NA	12	True	ATTAAA	-20	NA	105676945	105683371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105681311_105682877
ES.3708.10	chr10	+	5131	2	ISM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	425	325	-12	-325	intron_retention	FALSE	canonical	3	528	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAGCTGTACTAACA	NA	False	NA	10	True	ATTAAA	-18	NA	105677352	105683369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_105677517_105678402
ES.3708.11	chr10	+	865	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	426	522	-11	-522	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTTTGTATATAT	NA	False	NA	43	True	NA	NA	NA	105677353	105683172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ES.3708.2	chr10	+	3813	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	38	463	38	-463	multi-exon	FALSE	canonical	3	411	junction_2	58.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATCTTTAAAAACTTCA	NA	False	NA	-46	True	AAAAAG	-11	NA	105676965	105683231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105681311_105682877
ES.3708.3	chr10	+	1359	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	40	414	40	-414	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGTCTGAGCTCACAG	NA	False	NA	3	True	AATATA	-9	NA	105676967	105683280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ES.3708.4	chr10	+	3231	4	NNC	ENSMUSG00000019897.9	novel	1813	4	NA	NA	40	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	226.419963784115	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTGGCAGCTGTACTA	NA	False	NA	7	True	ATTAAA	-15	NA	105676967	105683366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_105677517_105678402_105678710_105679424_105681311_105682877
ES.3708.5	chr10	+	4253	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	59	2	59	-2	multi-exon	FALSE	canonical	3	411	junction_2	58.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGTGTAATAGAAGCG	NA	False	NA	NA	False	AATAAA	-16	NA	105676986	105683692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105681311_105682877
ES.3708.7	chr10	+	1406	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	405	2	-32	-2	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGTGTAATAGAAGCG	NA	False	NA	NA	False	AATAAA	-16	NA	105677332	105683692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ES.3708.8	chr10	+	4913	2	ISM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	411	557	-26	-557	intron_retention	FALSE	canonical	3	528	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGATTGTTAAATTA	NA	False	NA	8	True	AATGAA	-16	NA	105677338	105683137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_105677517_105678402
ES.3708.9	chr10	+	1609	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	414	-210	-23	210	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTGTCTTAAAGGTTT	NA	False	NA	NA	False	TATAAA	-18	NA	105677341	105683904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ES.37080.1	chrX	-	182	1	Intergenic	novelGene_30371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	67814585	67814403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_67814400_67814600
ES.37081.1	chrX	+	4187	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	0	39	0	-39	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTGGTGGTTGTATT	NA	False	NA	NA	False	ATTAAA	-10	NA	67864698	67868885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67864700_67868900
ES.37081.2	chrX	+	1932	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	11	2283	11	-2283	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGTAAATTATTTGGA	NA	False	NA	NA	False	ATTAAA	-12	NA	67864709	67866641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_67864700_67866600
ES.37082.1	chrX	-	1393	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-41	-602	-41	602	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTCTCTGGA	NA	False	NA	NA	False	AGTAAA	-20	NA	68649892	68648499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_68648500_68649900
ES.37082.2	chrX	-	1067	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-44	-273	-44	273	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACACTGTGCCTTTGA	NA	False	NA	57	True	ATTAAA	-20	NA	68649895	68648828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_68648800_68649900
ES.37082.3	chrX	-	835	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	-44	-41	-44	41	mono-exon	FALSE	NA	NA	NA	NA	NA	892	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTCATTAATAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	68649895	68649060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_68649100_68649900
ES.37082.4	chrX	-	715	2	Genic_Genomic	ENSMUSG00000082926.4	novel	750	1	NA	NA	-41	39	multi-exon	FALSE	canonical	0	0	junction_1	0	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGCTTTCATTAATAG	NA	False	NA	NA	False	AATAAA	-18	NA	68649892	68649062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_68649598_68649712
ES.37083.1	chrX	+	173	1	Intergenic	novelGene_30372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGCACT	NA	False	NA	NA	False	NA	NA	NA	68734434	68734607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_68734400_68734600
ES.37084.1	chrX	-	2062	5	NNC	ENSMUSG00000100511.2	novel	1133	9	NA	NA	205965	63704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATACTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	68981229	68909160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_68910746_68912156_68912330_68913826_68913944_68973230_68973296_68981107
ES.37085.1	chrX	-	5414	12	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-9951	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	14.5494312745627	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGGTTCTTAATGT	NA	False	NA	62	True	AATAAA	-20	NA	69418641	69386674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400_69408789_69416830_69417030_69418115_69418243_69418623
ES.37085.10	chrX	-	4759	10	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	7	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	11.2062592738871	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGACAGTTTTTCC	NA	False	NA	-26	True	AATAAA	-15	NA	69408683	69386762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400_69408494_69408611
ES.37085.11	chrX	-	4720	10	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	10	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	11.2062592738871	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTGACAGTTTTT	NA	False	NA	-28	True	AATAAA	-13	NA	69408680	69386764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400_69408499_69408650
ES.37085.13	chrX	-	5533	9	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-1909	-2089	intron_retention	FALSE	non_canonical	0	0	junction_8	11.709371246997	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTAAATGAGTAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	69410599	69388763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69408497_69408611
ES.37085.14	chrX	-	2798	10	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-39	-2089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	11.2062592738871	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTAAATGAGTAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	69408729	69388763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400_69408496_69408619
ES.37085.3	chrX	-	4987	11	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-20745	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.8674140320366	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGGGGTTCTTAA	NA	False	NA	59	True	AATAAA	-17	NA	69429435	69386677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69416830_69417030_69418623_69418701_69429403
ES.37085.6	chrX	-	5033	12	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-20742	-81	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	15.242394120098	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTTTTCCTGTATAT	NA	False	NA	-19	True	AATAAA	-22	NA	69429432	69386755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69416830_69417030_69418115_69418243_69418623_69418701_69429403
ES.37085.7	chrX	-	5008	12	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-20747	-83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.7096590806342	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACAGTTTTTCCTGTAT	NA	False	NA	-21	True	AATAAA	-20	NA	69429437	69386757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69416830_69417030_69418623_69418701_69419077_69419177_69429403
ES.37085.8	chrX	-	4865	9	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	10	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.346117177255	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGACAGTTTTTCC	NA	False	NA	-26	True	AATAAA	-15	NA	69408680	69386762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403747_69404648_69404738_69406582_69406761_69407407_69407545_69408400
ES.37085.9	chrX	-	5193	14	NNC	ENSMUSG00000035847.16	novel	4972	9	NA	NA	-20745	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	16.1461520137793	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGACAGTTTTTCC	NA	False	NA	-26	True	AATAAA	-15	NA	69429435	69386762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69409185_69409246_69416830_69417030_69418115_69418243_69418623_69418701_69425230_69425335_69429403
ES.37086.1	chrX	+	1118	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	-1	-23	-1	23	multi-exon	FALSE	canonical	3	343	junction_1	1.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCCTATGTCTTTATT	NA	False	NA	37	True	AATAAA	-44	NA	69429481	69433046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_69429758_69431499_69431773_69432477
ES.37086.2	chrX	+	1043	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	168	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAAGTGTCTAGCTCCC	NA	False	NA	13	True	AATAAA	-20	NA	69429482	69433022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_69429758_69431549_69431773_69432477
ES.37087.1	chrX	+	4427	1	Intergenic	novelGene_30373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGTTTCTGGTATAT	NA	False	NA	NA	False	NA	NA	NA	69522577	69527004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_69522600_69527000
ES.37087.2	chrX	+	1732	3	Genic_Genomic	ENSMUSG00000087325.4	novel	948	1	NA	NA	-34067	422	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTTTAGTCTCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	69522586	69558023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_69522811_69555395_69555470_69556589
ES.37088.1	chrX	-	2530	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	-18	-1205	-18	-1	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69520804	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
ES.37088.10	chrX	-	2330	6	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	86.1519587705352	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGTGTATTTTATT	NA	False	NA	-3	True	AATAAA	-18	NA	69520782	69503360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69520583
ES.37088.13	chrX	-	2241	8	NNC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.5587629356005	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGTGTGTATTTTAT	NA	False	NA	-4	True	AATAAA	-17	NA	69520754	69503361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69504077_69504313_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
ES.37088.2	chrX	-	2386	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	42	1	4	-1	multi-exon	FALSE	canonical	3	32	junction_3	81.8300678235085	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69520744	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
ES.37088.5	chrX	-	3389	6	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	188	junction_4	22.0272558436134	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69520765	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
ES.37088.6	chrX	-	2495	8	NNC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	-21064	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	99.6418074701496	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69541850	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69539202_69539354_69541815
ES.37088.8	chrX	-	2354	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69520786	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
ES.37088.9	chrX	-	2230	6	NIC	ENSMUSG00000073139.10	novel	2429	6	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	103.207364078345	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTGTATTTTATTC	NA	False	NA	-2	True	AATAAA	-19	NA	69520746	69503359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510810_69513723_69513901_69520583
ES.37089.1	chrX	+	2824	1	Intergenic	novelGene_30374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATCAGGAAAAAACCAATA	NA	False	NA	NA	False	NA	NA	NA	69756864	69759688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_69756900_69759700
ES.37089.2	chrX	+	5806	3	Intergenic	novelGene_30375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69756906	69765446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_69756984_69759337_69764928_69765307
ES.3709.1	chr10	-	2033	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	-7	7	-5	-7	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTATGATCAATGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	105677246	105599056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ES.3709.10	chr10	-	1875	11	NIC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	35.666370715283	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCATAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	105677240	105599114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_105599323_105601080_105601153_105601824_105601900_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ES.3709.11	chr10	-	1973	13	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.2640224719052	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCATAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	105677234	105599114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661942_105662453_105665708_105665816_105668711_105668877_105671987_105672082_105676936
ES.3709.12	chr10	-	1594	8	ISM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	59	30017	52	-29951	5prime_fragment	FALSE	canonical	3	65	junction_7	19.06701393528	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGTAGGGATTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	105677180	105629066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ES.3709.2	chr10	-	2073	13	NIC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	40	-7	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	44.608404165832	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTATGATCAATGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	105677192	105599056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105671987_105672082_105676936
ES.3709.3	chr10	-	2133	14	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	23	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.2128505222664	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTATGATCAATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	105677209	105599057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105606793_105606834_105606928_105607027_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ES.3709.4	chr10	-	1947	12	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.2127066604228	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTATGATCAATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	105677245	105599057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661942_105662453_105665708_105665816_105668711_105668877_105676936
ES.3709.5	chr10	-	2238	14	NIC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	-3	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	48.8740683411256	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAGTGTTTTCATTC	NA	False	NA	NA	False	AATAAA	-14	NA	105677235	105599110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105668965_105669142_105671987_105672082_105676936
ES.3709.6	chr10	-	5082	3	ISM	ENSMUSG00000036009.17	ENSMUST00000176924.8	2145	13	70618	-4	70449	4	3prime_fragment	FALSE	canonical	3	122	junction_2	3	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATAGTGTTTTCATT	NA	False	NA	NA	False	AATAAA	-13	NA	105606623	105599111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_105599323_105601080_105601153_105601824
ES.3709.7	chr10	-	2160	14	NNC	ENSMUSG00000036009.17	novel	2145	13	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.7832599723598	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCATAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	105677245	105599114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661942_105662453_105665708_105665816_105668711_105668877_105668965_105669142_105671987_105672082_105676936
ES.3709.8	chr10	-	788	8	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	41270	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	43.1797382567144	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCATAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	105635802	105599114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635662
ES.3709.9	chr10	-	726	8	NNC	ENSMUSG00000036009.17	novel	2033	12	NA	NA	41269	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	44.209612030851	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCATAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	105635803	105599114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105635725
ES.37090.1	chrX	+	3980	6	FSM	ENSMUSG00000059401.15	ENSMUST00000114629.4	3346	6	-159	-475	-143	245	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAGTTGTGTTTATTAT	NA	False	NA	NA	False	AATAAA	-18	NA	70093702	70198798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70093956_70145090_70145250_70161086_70163001_70189791_70190042_70195795_70195881_70197479
ES.37090.2	chrX	+	4920	7	FSM	ENSMUSG00000059401.15	ENSMUST00000082088.10	4796	7	-135	11	-119	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAAAGTGTCTCTGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	70093726	70199651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70093956_70145090_70145250_70161086_70163001_70164963_70165075_70189791_70190042_70195795_70195881_70197479
ES.37091.1	chrX	+	214	1	Intergenic	novelGene_30376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGTTTAGAACAGTAGCA	NA	False	NA	NA	False	NA	NA	NA	70204135	70204349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_70204100_70204300
ES.37092.1	chrX	+	3415	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	-26	-10	-26	10	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTGTGTGTTTAAGA	NA	False	NA	26	True	AATAAA	-34	NA	70258585	70358911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.10	chrX	+	9132	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	15	1	-7	-1	intron_retention	FALSE	canonical	3	300	junction_1	26.1022114731105	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCAGGGCTATGACTG	NA	False	NA	15	True	AATAAA	-23	NA	70258626	70358900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
ES.37092.11	chrX	+	3559	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	91.2376634098539	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTATTTCCAGGGCTA	NA	False	NA	9	True	AATAAA	-41	NA	70258627	70358894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351686_70357251
ES.37092.12	chrX	+	3140	13	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	97.4657703447158	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACAGTATTTCCAGGGC	NA	False	NA	7	True	AATAAA	-39	NA	70258635	70358892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.13	chrX	+	4277	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	25	-923	0	527	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGTAAAGACTCTGTTCA	NA	False	NA	NA	False	CATAAA	-19	NA	70258636	70359824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.14	chrX	+	2961	12	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	134.844262787156	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACAGTATTTCCAGGGC	NA	False	NA	7	True	AATAAA	-39	NA	70258637	70358892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
ES.37092.15	chrX	+	3170	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	5	junction_13	93.3887339099411	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTCCAGGGCTAT	NA	False	NA	10	True	AATAAA	-42	NA	70258637	70358895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
ES.37092.16	chrX	+	3360	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	122.032615245571	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTCCAGGGCTAT	NA	False	NA	10	True	AATAAA	-42	NA	70258638	70358895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278590_70297883_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351487_70357251
ES.37092.17	chrX	+	3292	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-1	-32	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	138.945224855711	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATTGCAATAAATATTA	NA	False	NA	-46	True	NA	NA	NA	70258640	70358839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70264212_70264328_70274996_70275068_70276677_70276751_70278457_70278553_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.18	chrX	+	3464	16	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	115.637863848981	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCAGGGCTATGACTG	NA	False	NA	15	True	AATAAA	-23	NA	70258640	70358900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70264212_70264328_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.19	chrX	+	3134	13	NIC	ENSMUSG00000031337.17	novel	3286	14	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	98.0590454210568	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACAGTATTTCCAGGGC	NA	False	NA	7	True	AATAAA	-39	NA	70258640	70358892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70351305_70351483_70357251
ES.37092.2	chrX	+	3268	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	91.7350184469783	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258611	70358901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.21	chrX	+	6432	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	-90	intron_retention	FALSE	canonical	3	290	junction_13	25.1085218565826	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAAAAACTAATACT	NA	False	NA	NA	False	ATTAAA	-15	NA	70258656	70358781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.22	chrX	+	3271	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	140.965547969302	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCAGGGCTATGACTG	NA	False	NA	15	True	AATAAA	-23	NA	70258656	70358900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70264212_70264328_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
ES.37092.23	chrX	+	3438	16	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	118.283764265807	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGTAATAAATATATTA	NA	False	NA	-20	True	AATAAA	-12	NA	70258656	70358865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70352735_70352876_70357251
ES.37092.25	chrX	+	3415	14	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	122.90719065536	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTAACTAAAACCTAAC	NA	False	NA	-7	True	AATAAA	-25	NA	70258660	70358878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351686_70357251
ES.37092.27	chrX	+	4723	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	91.2376634098539	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGCTATGACTGTG	NA	False	NA	17	True	AATAAA	-25	NA	70258661	70358902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70352876_70357251
ES.37092.29	chrX	+	3215	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	56	108	3	-78	multi-exon	FALSE	canonical	3	290	junction_14	28.3207755284104	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATACTAATAGTTGACAG	NA	False	NA	-92	True	ATTAAA	-27	NA	70258667	70358793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.30	chrX	+	3345	14	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	3	120	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_13	120.386163666623	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGTAATTATTGTCT	NA	False	NA	NA	False	NA	NA	NA	70258667	70359021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357254
ES.37092.31	chrX	+	3375	15	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.3753947525774	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258680	70358901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.32	chrX	+	3493	15	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-7	118	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.3753947525774	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTGTAATTATTGT	NA	False	NA	NA	False	NA	NA	NA	70258680	70359019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.34	chrX	+	5069	14	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	14	junction_13	116.374319540527	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTATTTCCAGGGCTA	NA	False	NA	9	True	AATAAA	-41	NA	70258683	70358894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258754_70274996_70275068_70276677_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357254
ES.37092.35	chrX	+	3154	15	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-2	-186	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.3753947525774	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTATGGATTTTGTAAG	NA	False	NA	NA	False	AATATA	-7	NA	70258685	70358685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.37	chrX	+	3372	15	NNC	ENSMUSG00000031337.17	novel	3338	15	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.400804935499	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTCCAGGGCTAT	NA	False	NA	10	True	AATAAA	-42	NA	70258691	70358895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70258768_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.38	chrX	+	3417	15	NNC	ENSMUSG00000031337.17	novel	3469	3	NA	NA	4101	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	90.9078082005981	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGTAATAAATATATTAA	NA	False	NA	-19	True	AATAAA	-13	NA	70262791	70358866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70262942_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.39	chrX	+	3055	11	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	39244	9	39165	-2	3prime_fragment	FALSE	canonical	3	290	junction_10	27.9649780976135	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACAGTATTTCCAGGGC	NA	False	NA	7	True	AATAAA	-39	NA	70297855	70358892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.4	chrX	+	2658	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	1	6489	1	-1505	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAACCTTGTTGATTG	NA	False	NA	NA	False	ATTAAA	-26	NA	70258612	70352412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
ES.37092.40	chrX	+	5997	6	NIC	ENSMUSG00000031337.17	novel	3488	15	NA	NA	-19138	3890	intron_retention	FALSE	canonical	3	322	junction_2	24.3014402865345	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAGAATTATATAGAGT	NA	False	NA	NA	False	AGTAAA	-16	NA	70325836	70346357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106
ES.37092.41	chrX	+	2761	8	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	72142	9	-14221	-2	3prime_fragment	FALSE	canonical	3	290	junction_7	30.8286905862916	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACAGTATTTCCAGGGC	NA	False	NA	7	True	AATAAA	-39	NA	70330753	70358892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.42	chrX	+	5961	1	NIC	ENSMUSG00000031337.17	novel	3488	15	NA	NA	-8438	30	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCTGCAAACAGAATTG	NA	False	NA	NA	False	NA	NA	NA	70336536	70342497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70336500_70342500
ES.37092.43	chrX	+	2251	5	NIC	ENSMUSG00000031337.17	novel	3488	15	NA	NA	-5206	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	153.872309074765	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70339768	70358901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
ES.37092.5	chrX	+	2432	12	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	-1505	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	102.099772949618	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAACCTTGTTGATTG	NA	False	NA	NA	False	ATTAAA	-26	NA	70258625	70352412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
ES.37092.6	chrX	+	3151	13	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	97.9595650709459	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCCAGGGCTATGACTG	NA	False	NA	15	True	AATAAA	-23	NA	70258625	70358900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.7	chrX	+	3182	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	14	5952	-8	-968	5prime_fragment	FALSE	canonical	3	300	junction_1	26.1022114731105	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGCATAGGACTTTCTA	NA	False	NA	NA	False	ATTAAA	-4	NA	70258625	70352949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305
ES.37092.8	chrX	+	3263	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	3	19	junction_3	89.9133047266304	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTATTTCCAGGGCTA	NA	False	NA	9	True	AATAAA	-41	NA	70258625	70358894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ES.37092.9	chrX	+	3665	10	FSM	ENSMUSG00000031337.17	ENSMUST00000126208.8	2339	10	-15	-1311	-7	30	multi-exon	FALSE	canonical	3	300	junction_1	24.1844761962894	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCTGCAAACAGAATTG	NA	False	NA	NA	False	NA	NA	NA	70258626	70342497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769
ES.37093.1	chrX	+	4748	15	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.7717153593699	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGTTGTCTCTG	NA	False	NA	6	True	ACTAAA	-19	NA	70408357	70462797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431717_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.10	chrX	+	3398	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	-5	1241	-5	-709	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTGTTATGGGTTTA	NA	False	NA	NA	False	GATAAA	-20	NA	70408360	70461561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.11	chrX	+	4882	16	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.2474894624475	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTGCTCCCTGGTC	NA	False	NA	-7	True	ACTAAA	-6	NA	70408365	70462784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70423327_70423604_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445525_70448471_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.12	chrX	+	5630	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	0	-5	intron_retention	FALSE	canonical	3	55	junction_12	10.4207349057699	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGTTGTCTCTG	NA	False	NA	6	True	ACTAAA	-19	NA	70408365	70462797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.13	chrX	+	2187	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	1	2446	1	-1914	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGGCTGCTCTATTGTC	NA	False	NA	NA	False	NA	NA	NA	70408366	70460356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.14	chrX	+	4232	13	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.3660484939628	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGGTCTCTGTTGTCT	NA	False	NA	3	True	ACTAAA	-16	NA	70408366	70462794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.15	chrX	+	3196	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	9	-711	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	22.5031227287321	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGCTGTTATGGGTT	NA	False	NA	NA	False	GATAAA	-18	NA	70408374	70461559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.16	chrX	+	4768	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	10	-144	10	144	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAAGTTGTCAGCAATT	NA	False	NA	NA	False	AATATA	-30	NA	70408375	70462946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.17	chrX	+	3229	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	10	-713	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTCTGCTGTTATGGG	NA	False	NA	NA	False	GATAAA	-16	NA	70408375	70461557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.18	chrX	+	4502	15	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	11	-711	intron_retention	FALSE	canonical	1	1	junction_2	28.95184249186	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGCTGTTATGGGTT	NA	False	NA	NA	False	GATAAA	-18	NA	70408376	70461559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70423327_70423619_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.19	chrX	+	4005	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	20	29	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	23.3156878898125	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTCATATACTTTT	NA	False	NA	NA	False	AAAAAG	-24	NA	70408385	70462299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.2	chrX	+	4641	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	-7	0	-7	0	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408358	70462802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.20	chrX	+	4682	15	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.6260839130214	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408458	70462802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70423327_70423619_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.21	chrX	+	3972	12	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-67	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	28.0230129750237	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTGGTCTCTGTTGTC	NA	False	NA	2	True	ACTAAA	-15	NA	70408475	70462793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.3	chrX	+	4491	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408358	70462802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.4	chrX	+	4528	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-7	-7	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	23.3156878898125	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGTCTCTGTTGTCTC	NA	False	NA	4	True	ACTAAA	-17	NA	70408358	70462795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.5	chrX	+	4638	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-7	147	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTGTCAGCAATTTGT	NA	False	NA	NA	False	AATATA	-33	NA	70408358	70462949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.6	chrX	+	4670	16	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-6	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	28.6025639876335	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408359	70462802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444263_70444690_70444791_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.7	chrX	+	4296	13	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-6	-5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	21.0216488939907	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGTTGTCTCTG	NA	False	NA	6	True	ACTAAA	-19	NA	70408359	70462797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37093.8	chrX	+	4616	15	NNC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	22.7021530939698	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTGGTCTCTGTTGTC	NA	False	NA	2	True	ACTAAA	-15	NA	70408359	70462793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435383_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ES.37094.1	chrX	-	3260	8	NIC	ENSMUSG00000035776.15	novel	3327	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	18.3903257620047	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGATGTGATCTGTCT	NA	False	NA	1	True	NA	NA	NA	70536247	70463665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70536127
ES.37094.10	chrX	-	1703	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	209	1688	5	876	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCATGCTTGTTGTTTT	NA	False	NA	NA	False	AATGAA	-11	NA	70536246	70465353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ES.37094.2	chrX	-	3403	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	196	1	-4	-1	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGATGTGATCTGTC	NA	False	NA	0	True	NA	NA	NA	70536259	70463666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ES.37094.3	chrX	-	3476	11	NNC	ENSMUSG00000035776.15	novel	3600	10	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	21.1291268158436	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTCCTGATGTGAT	NA	False	NA	-5	True	NA	NA	NA	70536246	70463671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70478438_70478530_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ES.37094.4	chrX	-	3328	9	FSM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	-7	6	-3	-6	multi-exon	FALSE	canonical	1	4	junction_7	17.0399347123162	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATGTCCTGATGTGAT	NA	False	NA	-5	True	NA	NA	NA	70536258	70463671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70494216_70494280_70536127
ES.37094.5	chrX	-	3613	12	NNC	ENSMUSG00000035776.15	novel	3600	10	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	24.879544520292	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTATGTCCTGATGTG	NA	False	NA	-7	True	NA	NA	NA	70536246	70463673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70478438_70478530_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70535477_70535617_70536127
ES.37094.6	chrX	-	10614	3	NIC	ENSMUSG00000035776.15	novel	3459	8	NA	NA	59504	-10	intron_retention	FALSE	canonical	3	44	junction_2	6	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTTATGTCCTGATG	476	False	NA	-9	True	NA	NA	NA	70476707	70463675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_70466356_70467629_70472773_70473916
ES.37094.8	chrX	-	3468	11	NNC	ENSMUSG00000035776.15	novel	3600	10	NA	NA	7	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.1707345172528	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACAGCTCCTTATGTCCT	NA	False	NA	-13	True	NA	NA	NA	70536244	70463679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70518220_70518314_70536127
ES.37094.9	chrX	-	2767	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	209	624	5	-624	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCAATAGCACTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	70536246	70464289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ES.37095.1	chrX	+	175	1	Intergenic	novelGene_30377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70578647	70578822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_70578600_70578800
ES.37096.1	chrX	-	179	1	Intergenic	novelGene_30378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70589844	70589665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_70589700_70589800
ES.37097.1	chrX	+	1604	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	-20	-13	-20	13	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTCAACTTGCTTT	NA	False	NA	NA	False	TTTAAA	-40	NA	70599503	70604295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.3	chrX	+	1564	6	NNC	ENSMUSG00000015217.12	novel	1743	5	NA	NA	5	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	379.422719404097	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTTCTGTATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	70599528	70604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70599615_70599769_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.4	chrX	+	1665	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	62	16	0	-16	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAACGGCCTAAATTTC	NA	False	NA	NA	False	AATAAA	-29	NA	70599595	70604266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.5	chrX	+	741	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	74	756	2	147	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTAGTTTCTCAAAGT	NA	False	NA	NA	False	NA	NA	NA	70599597	70603526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.6	chrX	+	1960	5	NNC	ENSMUSG00000015217.12	novel	1728	5	NA	NA	2	-29	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	365.186253848635	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTTCTGTATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	70599597	70604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70600107_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.7	chrX	+	1697	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	2	29	2	-29	multi-exon	FALSE	canonical	3	38	junction_1	352.060630431748	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTTCTGTATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	70599597	70604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.8	chrX	+	1726	5	NIC	ENSMUSG00000015217.12	novel	634	4	NA	NA	-112	-29	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	363.915082814659	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTTCTGTATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	70600439	70604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_70600715_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ES.37097.9	chrX	+	1458	4	FSM	ENSMUSG00000015217.12	ENSMUST00000132145.2	847	4	263	-874	263	-29	multi-exon	FALSE	canonical	3	753	junction_3	86.723058576649	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTTCTGTATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	70601651	70604253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70601814_70602038_70602179_70602703_70602879_70603272
ES.37098.1	chrX	-	169	1	Intergenic	novelGene_30379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	70726802	70726633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_70726600_70726800
ES.37099.1	chrX	+	197	1	Intergenic	novelGene_30380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAACCCAGGTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	70796354	70796551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_70796400_70796600
ES.371.1	chr1	-	173	1	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACGATGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	42756273	42756100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_42756100_42756300
ES.3710.1	chr10	-	167	1	Intergenic	novelGene_2822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGTCTAAGA	NA	False	NA	NA	False	NA	NA	NA	105769830	105769663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_105769700_105769800
ES.37100.1	chrX	+	2177	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3191	1442	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGCTATTATTGAT	NA	False	NA	NA	False	AATAAA	-13	NA	70856338	70866032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
ES.37100.10	chrX	+	4270	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114575.4	4290	3	19	1	-4	-1	multi-exon	FALSE	canonical	0	0	junction_1	199.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGTGTCCTCATTC	NA	False	NA	15	True	ATTAAA	-19	NA	70860414	70868311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860674_70863673_70863784_70864410
ES.37100.11	chrX	+	2881	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	56	1258	1	-1258	multi-exon	FALSE	canonical	3	286	junction_1	56.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTCAAAGTAACTGCGTA	NA	False	NA	NA	False	AGTAAA	-15	NA	70860419	70867054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.12	chrX	+	3752	2	NNC	ENSMUSG00000073131.13	novel	4195	3	NA	NA	4064	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTACTGTGCTGTGTCC	NA	False	NA	9	True	ATTAAA	-13	NA	70864482	70868305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70867472_70867542
ES.37100.2	chrX	+	805	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3191	70	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGTCTTAAAGAGTC	NA	False	NA	23	True	AATAAA	-35	NA	70856338	70864660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
ES.37100.3	chrX	+	2667	4	NNC	ENSMUSG00000073131.13	novel	4652	4	NA	NA	-3137	-1736	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	181.726901329073	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTCACACTGGTATT	NA	False	NA	NA	False	AATAAA	-21	NA	70856392	70866576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70856555_70860076_70860306_70863673_70863784_70864410
ES.37100.4	chrX	+	4196	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	-2	1	-2	-1	multi-exon	FALSE	canonical	3	286	junction_1	56.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGTGTCCTCATTC	NA	False	NA	15	True	ATTAAA	-19	NA	70860361	70868311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.5	chrX	+	2127	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	4	2064	4	1658	multi-exon	FALSE	canonical	3	286	junction_1	56.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTTTATTTTGTAAAG	NA	False	NA	NA	False	AATATA	-26	NA	70860367	70866248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.6	chrX	+	2496	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	7	1692	7	-1692	multi-exon	FALSE	canonical	3	286	junction_1	56.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTTTTCTAGGATT	NA	False	NA	NA	False	ATTAAA	-42	NA	70860370	70866620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.7	chrX	+	533	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	22	3640	-10	82	multi-exon	FALSE	canonical	3	286	junction_1	56.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCAGTCACATTTGG	NA	False	NA	35	True	AATAAA	-29	NA	70860385	70864672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.8	chrX	+	1909	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	22	2264	-10	1458	multi-exon	FALSE	canonical	3	286	junction_1	56.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGATGGTCTACTGTT	NA	False	NA	NA	False	AATAAA	-29	NA	70860385	70866048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_70860547_70863673_70863784_70864410
ES.37100.9	chrX	+	4009	4	NNC	ENSMUSG00000073131.13	novel	483	4	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	167.917307691084	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTACTGTGCTGTGTCC	NA	False	NA	9	True	ATTAAA	-13	NA	70860404	70868305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_70860547_70863673_70863784_70864410_70866152_70866289
ES.37101.1	chrX	+	5444	4	FSM	ENSMUSG00000033361.14	ENSMUST00000170096.8	3408	4	-155	-1881	-154	-731	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATCCTGTGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	71006075	71015597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71006386_71009420_71009459_71010107_71010269_71010662
ES.37101.2	chrX	+	6334	5	NNC	ENSMUSG00000033361.14	novel	3408	4	NA	NA	-152	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.52769256906871	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTACCTTGTCCTGGTC	NA	False	NA	5	True	AATAAA	-16	NA	71006077	71016327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71006386_71007221_71007384_71009420_71009459_71010107_71010269_71010662
ES.37101.3	chrX	+	6052	4	FSM	ENSMUSG00000033361.14	ENSMUST00000170096.8	3408	4	-33	-2611	-32	-1	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTACCTTGTCCTGGTC	NA	False	NA	5	True	AATAAA	-16	NA	71006197	71016327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71006386_71009420_71009459_71010107_71010269_71010662
ES.37101.4	chrX	+	5959	4	FSM	ENSMUSG00000033361.14	ENSMUST00000048790.7	5931	4	-28	0	-28	0	multi-exon	FALSE	canonical	3	9	junction_1	0.471404520791032	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTACCTTGTCCTGGTCG	NA	False	NA	6	True	AATAAA	-17	NA	71006559	71016328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71006654_71009420_71009459_71010107_71010269_71010662
ES.37101.5	chrX	+	5260	4	FSM	ENSMUSG00000033361.14	ENSMUST00000048790.7	5931	4	-15	686	-15	-686	multi-exon	FALSE	canonical	3	9	junction_1	0.471404520791032	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAGTATGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	71006572	71015642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71006654_71009420_71009459_71010107_71010269_71010662
ES.37101.6	chrX	+	6714	4	NNC	ENSMUSG00000033361.14	novel	5931	4	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_2	4.02768199119819	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTACCTTGTCCTGGTC	NA	False	NA	5	True	AATAAA	-16	NA	71006614	71016327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71006654_71007221_71007384_71009420_71010269_71010662
ES.37102.1	chrX	+	2902	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4098	463	multi-exon	FALSE	canonical	1	2	junction_6	3.54729944229879	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCGCCGGGCATCTGTT	NA	False	NA	NA	False	NA	NA	NA	71261524	71267033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_71261614_71262220_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71264959
ES.37102.2	chrX	+	3387	6	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4060	379	multi-exon	FALSE	canonical	1	2	junction_5	3.48711915483254	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTATTTAGTGTGTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	71261562	71266949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71264959
ES.37102.3	chrX	+	2085	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4058	381	multi-exon	FALSE	canonical	2	2	junction_1	3.54729944229879	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTAGTGTGTGGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	71261564	71266951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_71261614_71262315_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71265559
ES.37102.4	chrX	+	2180	7	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-4058	381	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTAGTGTGTGGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	71261564	71266951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_71261614_71262220_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786_71264860_71265559
ES.37102.5	chrX	+	3008	5	Genic_Genomic	ENSMUSG00000033343.2	novel	948	1	NA	NA	-3506	454	multi-exon	FALSE	canonical	2	7	junction_1	1.78535710713571	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAAAAGCCTTCGCCGG	NA	False	NA	NA	False	NA	NA	NA	71262116	71267024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_71262501_71263739_71263837_71264233_71264433_71264562_71264653_71264786
ES.37103.1	chrX	-	706	1	ISM	ENSMUSG00000031340.9	ENSMUST00000064780.4	4306	9	18098	1	13058	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGGTGTGGCTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	71300311	71299605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_71299600_71300300
ES.37104.1	chrX	-	2122	8	NIC	ENSMUSG00000031340.9	novel	579	6	NA	NA	54	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.699854212223765	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	71318355	71304989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_71305143_71306050_71306189_71307348_71307432_71308124_71308215_71308310_71308346_71312834_71312903_71313290_71314742_71318251
ES.37105.1	chrX	-	3766	4	FSM	ENSMUSG00000043453.6	ENSMUST00000088481.5	1821	4	-2	-1943	-2	1943	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATAGGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	71430466	71423532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71427050_71427946_71428036_71428780_71428874_71430399
ES.37105.2	chrX	-	1727	4	FSM	ENSMUSG00000043453.6	ENSMUST00000088481.5	1821	4	6	88	6	-88	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTGTTAATAATTGCC	NA	False	NA	NA	False	AATAAA	-25	NA	71430458	71425563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71427050_71427946_71428036_71428780_71428874_71430399
ES.37106.1	chrX	+	240	1	Intergenic	novelGene_30381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACTCCTAAAAACAGTTA	NA	False	NA	NA	False	NA	NA	NA	71631924	71632164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_71631900_71632200
ES.37107.1	chrX	+	175	1	Intergenic	novelGene_30382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	71704735	71704910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_71704700_71704900
ES.37108.1	chrX	-	201	1	Intergenic	novelGene_30383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTGGAAATATAGAATG	NA	False	NA	NA	False	NA	NA	NA	71944773	71944572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_71944600_71944800
ES.37109.1	chrX	+	1469	4	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	-475	-21049	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	178.557180383951	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAATGGTGTCAGCGTTT	NA	False	NA	NA	False	NA	NA	NA	71961687	71976213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71962300_71969899_71970017_71973229_71973389_71975632
ES.37109.10	chrX	+	1667	8	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	82	-383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.879689398534	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGACTCTGGTGTGG	NA	False	NA	13	True	CATAAA	-13	NA	71962244	72001737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71962300_71969899_71970017_71973229_71973353_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.11	chrX	+	2881	1	Intergenic	novelGene_30384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	71982136	71985017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_71982100_71985000
ES.37109.12	chrX	+	5207	5	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	26772	384	15577	-384	3prime_fragment	FALSE	canonical	3	334	junction_3	35.0499643366438	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAGACTCTGGTGTG	NA	False	NA	12	True	CATAAA	-12	NA	71988934	72001736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.13	chrX	+	5441	5	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	17626	-376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.883783805283	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTGGTCTTTAT	NA	False	NA	20	True	CATAAA	-20	NA	71990983	72001744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71992918_71994173_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.14	chrX	+	1620	4	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	34283	-9	23088	9	3prime_fragment	FALSE	canonical	3	334	junction_2	36.8811906291299	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGGCTGTTCTTCCA	4602	False	NA	NA	False	AATAAA	-15	NA	71996445	72002129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.15	chrX	+	852	1	NIC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	27528	-383	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGACTCTGGTGTGG	9042	False	NA	13	True	CATAAA	-13	NA	72000885	72001737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72000900_72001700
ES.37109.2	chrX	+	2176	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	1	-9	1	9	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGGCTGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	71962163	72002129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.3	chrX	+	1784	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	7	377	7	-377	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTGGTGTGGTCTTTA	NA	False	NA	19	True	CATAAA	-19	NA	71962169	72001743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.4	chrX	+	1880	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	27	261	27	-261	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGTGGTCTCCTTCA	NA	False	NA	NA	False	AATAAA	-31	NA	71962189	72001859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.5	chrX	+	1634	9	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	33	-384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	128.750182038706	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAGACTCTGGTGTG	NA	False	NA	12	True	CATAAA	-12	NA	71962195	72001736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887_72001516_72001632
ES.37109.6	chrX	+	1708	8	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	34	-383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	134.879689398534	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGACTCTGGTGTGG	NA	False	NA	13	True	CATAAA	-13	NA	71962196	72001737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71962300_71969899_71970017_71973229_71973389_71992813_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.7	chrX	+	1294	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	37	837	37	-837	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCTCTTGACCTGTG	NA	False	NA	NA	False	NA	NA	NA	71962199	72001283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ES.37109.9	chrX	+	4012	8	NNC	ENSMUSG00000031349.5	novel	2168	8	NA	NA	50	-381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.428274427953	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGACTCTGGTGTGGTC	NA	False	NA	15	True	CATAAA	-15	NA	71962212	72001739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71994173_71996578_71998677_71998821_71999942_72000046_72000887
ES.3711.1	chr10	+	5394	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	-210	-4313	-210	4313	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGCTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	106018671	106024065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_106018700_106024100
ES.3711.2	chr10	+	3378	2	Genic_Genomic	ENSMUSG00000112523.2	novel	871	1	NA	NA	-14	4308	multi-exon	FALSE	canonical	3	32	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGCTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	106018867	106024060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_106019108_106020922
ES.3711.3	chr10	+	4609	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	-3	-3735	-3	3735	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTTTTAGTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	106018878	106023487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_106018900_106023500
ES.3711.4	chr10	+	4106	2	Genic_Genomic	ENSMUSG00000112523.2	novel	871	1	NA	NA	2	4311	multi-exon	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGCTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	106018883	106024063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_106021522_106022595
ES.37110.1	chrX	-	2835	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	51	-1600	51	1600	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGGTGATTATTGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	71961966	71955537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ES.37110.2	chrX	-	1318	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	10	-42	10	42	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTATAGAGTCTTATG	NA	False	NA	40	True	NA	NA	NA	71962007	71957095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ES.37110.3	chrX	-	1140	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	-13	159	-13	13	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATGAGTATTTTTTAG	NA	False	NA	0	True	AATAAA	-30	NA	71962030	71957296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ES.37110.4	chrX	-	1055	5	NNC	ENSMUSG00000031347.13	novel	1286	5	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	268.561445483152	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTCATTCTTTAAAGG	NA	False	NA	-15	True	AATAAA	-15	NA	71961939	71957311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_71957900_71958445_71958584_71959870_71960021_71960293_71960453_71961919
ES.37110.6	chrX	-	975	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	51	260	51	-88	multi-exon	FALSE	canonical	3	590	junction_4	36.4862987983161	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCAATGAGTGCTTGC	NA	False	NA	-101	True	NA	NA	NA	71961966	71957397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ES.37111.1	chrX	+	3536	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	-3	24	-3	-24	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATAACTTCTTTTTTA	NA	False	NA	21	True	AATAAA	-21	NA	72030941	72075125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.10	chrX	+	3341	17	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	24.2998842589836	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030967	72075124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72044593_72044678_72045010_72045053_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.11	chrX	+	4006	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	-32	intron_retention	FALSE	canonical	3	40	junction_11	12.988150042346	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCAGTATTATAACTT	NA	False	NA	13	True	AATAAA	-13	NA	72030967	72075117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.12	chrX	+	1662	11	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	6201	intron_retention	FALSE	canonical	3	44	junction_8	14.5811522178462	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATGTAATTTTGTGAG	NA	False	NA	NA	False	AATGAA	-6	NA	72030967	72047212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978
ES.37111.13	chrX	+	3443	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	-25	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	17.8703520102112	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030967	72075124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.14	chrX	+	4388	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	-33	intron_retention	FALSE	canonical	3	40	junction_11	13.5084236182657	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCAGTATTATAACT	NA	False	NA	12	True	AATAAA	-12	NA	72030967	72075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.15	chrX	+	4962	12	ISM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	23	24133	2	10005	5prime_fragment	FALSE	canonical	3	42	junction_6	15.1226391504933	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTTTTGCCTGCACAT	NA	False	NA	NA	False	ATTAAA	-14	NA	72030967	72051016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978
ES.37111.16	chrX	+	3447	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	19.1768314653882	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTGTATGTGTGCAC	NA	False	NA	45	True	AATAAA	-45	NA	72030967	72075149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.18	chrX	+	3410	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	9	-33	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	19.4662337409003	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCAGTATTATAACT	NA	False	NA	12	True	AATAAA	-12	NA	72030974	72075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.19	chrX	+	3435	18	NNC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	9	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.6142832888127	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCAGTATTATAACT	NA	False	NA	12	True	AATAAA	-12	NA	72030974	72075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72031126_72040640_72040719_72041278_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.20	chrX	+	2061	19	FSM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	33	1463	12	-1463	multi-exon	FALSE	canonical	3	40	junction_12	13.3427050397503	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTAGCTTGTCTATTCA	NA	False	NA	NA	False	ATTAAA	-24	NA	72030977	72073686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.21	chrX	+	5044	11	NIC	ENSMUSG00000031351.16	novel	3533	19	NA	NA	31	10185	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	24.2695282195596	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCATCTTTCTAGCCCTT	NA	False	NA	NA	False	NA	NA	NA	72030996	72051196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978
ES.37111.22	chrX	+	3953	17	NNC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	33	-32	intron_retention	FALSE	canonical	0	0	junction_3	22.8988946239769	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCAGTATTATAACTT	NA	False	NA	13	True	AATAAA	-13	NA	72030998	72075117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041278_72041410_72042141_72042181_72042274_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.23	chrX	+	8446	1	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	34816	-29	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGTATTATAACTTCTT	NA	False	NA	16	True	AATAAA	-16	NA	72066674	72075120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72066700_72075100
ES.37111.24	chrX	+	1945	2	ISM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	41478	32	40585	-32	3prime_fragment	FALSE	canonical	3	72	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCAGTATTATAACTT	NA	False	NA	13	True	AATAAA	-13	NA	72072443	72075117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72072550_72073278
ES.37111.25	chrX	+	354	1	ISM	ENSMUSG00000031351.16	ENSMUST00000164800.8	3557	19	43184	667	42270	-667	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGTCCTCAAGAC	NA	False	NA	NA	False	ATTAAA	-20	NA	72074128	72074482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72074100_72074500
ES.37111.4	chrX	+	3428	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	-6	-27	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	18.8150716292876	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTATAACTTCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	72030959	72075122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.5	chrX	+	3594	20	NNC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	-4	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.2475190013308	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCAGTATTATAACT	NA	False	NA	12	True	AATAAA	-12	NA	72030961	72075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72031126_72033922_72034010_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.6	chrX	+	4697	17	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	-3	-25	intron_retention	FALSE	canonical	3	40	junction_10	12.9010658474407	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030962	72075124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.7	chrX	+	3358	17	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	-1	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	22.5616343324237	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTATAACTTCTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	72030964	72075123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72042141_72042181_72042274_72042353_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37111.8	chrX	+	8006	15	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	0	-25	intron_retention	FALSE	canonical	3	40	junction_9	13.2851382363596	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATAACTTCTTTTTT	NA	False	NA	20	True	AATAAA	-20	NA	72030965	72075124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72064577_72072450_72072550_72073278
ES.37111.9	chrX	+	2091	18	NIC	ENSMUSG00000031351.16	novel	3557	19	NA	NA	2	-1356	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	19.1768314653882	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTTCCATTCTCCTTT	NA	False	NA	NA	False	TTTAAA	-43	NA	72030967	72073793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72043622_72043707_72044593_72044678_72045010_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ES.37112.1	chrX	-	2110	1	Intergenic	novelGene_30385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTCTGAGATAA	NA	False	NA	NA	False	AATAAA	-24	NA	72070298	72068188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72068200_72070300
ES.37113.1	chrX	-	1346	1	Antisense	novelGene_ENSMUSG00000031351.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAAGAAGCAAATCA	NA	False	NA	NA	False	ATTAAA	-11	NA	72076392	72075046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_72075000_72076400
ES.37114.1	chrX	-	2684	5	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2671	-1	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_1	20.9568008054665	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTTCTGGCGATGTT	NA	False	NA	-1	True	AATAAA	-20	NA	72083380	72077587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72077934_72078769_72080775_72080892_72080952_72081548_72081672_72083229
ES.37114.3	chrX	-	3557	3	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2591	-2	intron_retention	FALSE	canonical	3	77	junction_2	5	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTCTGGCGATGT	NA	False	NA	-2	True	AATAAA	-19	NA	72083300	72077588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72080952_72081548_72081672_72083229
ES.37114.5	chrX	-	3415	4	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	-2591	-19	intron_retention	FALSE	canonical	3	77	junction_3	4.18993502999218	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCTCATGAATGTTC	NA	False	NA	-26	True	AATACA	-11	NA	72083300	72077612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72080775_72080892_72080952_72081548_72081672_72083229
ES.37114.6	chrX	-	536	2	NNC	ENSMUSG00000050424.10	novel	2287	2	NA	NA	723	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCTCATGAATGTTC	NA	False	NA	-26	True	AATACA	-11	NA	72078986	72077612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72077934_72078771
ES.37115.1	chrX	-	1649	6	NNC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	-16	12345	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	483.431649770679	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAATGTCTCCTACTTG	NA	False	NA	NA	False	NA	NA	NA	72140645	72117553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72117658_72129607_72130791_72130883_72130980_72137788_72137859_72138551_72138689_72140586
ES.37115.10	chrX	-	3508	7	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	1	intron_retention	FALSE	canonical	3	11	junction_6	109.343495462693	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72126116	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125674_72125860
ES.37115.11	chrX	-	4380	3	ISM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	1836	-1	-1176	1	intron_retention	FALSE	canonical	3	118	junction_2	30	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72124248	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72118324_72118440_72118537_72120338
ES.37115.12	chrX	-	1239	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-54	-1	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_8	86.1506674379253	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72126138	72117951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125964
ES.37115.13	chrX	-	1194	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.026865786119	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72126075	72117951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118342_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125964
ES.37115.14	chrX	-	4923	5	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-32	-1	intron_retention	FALSE	canonical	0	0	junction_4	65.7395428946688	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72126116	72117951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72124950_72125079
ES.37115.15	chrX	-	1429	8	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	559	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	124.033899250428	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72125481	72117951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72124776_72124950_72125079
ES.37115.16	chrX	-	1158	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	100.580502583751	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72126093	72117951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125964
ES.37115.17	chrX	-	669	2	Fusion	ENSMUSG00000079845.9_ENSMUSG00000057836.13	novel	648	3	NA	NA	-4487	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	483	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTTGGCATGAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	72130571	72117952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72118106_72130055
ES.37115.18	chrX	-	1191	9	FSM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	-32	3	-32	-3	multi-exon	FALSE	canonical	3	52	junction_8	89.7743699504486	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	NA	False	AATAAA	-13	NA	72126116	72117953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125988
ES.37115.2	chrX	-	4199	6	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	4	5	intron_retention	FALSE	canonical	3	52	junction_5	92.0065215079888	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCATGAGTCATTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	72126080	72117945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72118324_72118440_72120438_72121630_72122700_72124325_72124395_72125079_72125674_72125988
ES.37115.20	chrX	-	1665	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	-79	-2	-1	2	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGCATGAGTCATTTAA	NA	False	NA	-3	True	AATAAA	-20	NA	72140702	72129896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.21	chrX	-	3794	7	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	586	junction_5	385.386674508718	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140655	72129898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.22	chrX	-	3950	7	NNC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	133	junction_5	517.713053298403	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140670	72129898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138425_72138689_72140586
ES.37115.23	chrX	-	4470	6	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	806	junction_1	301.757783661002	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140623	72129898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72138689_72140586
ES.37115.24	chrX	-	1628	9	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	616.836472961027	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140622	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138401_72138585_72140586
ES.37115.25	chrX	-	1672	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	-26	-1	-26	-1	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140727	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.26	chrX	-	2445	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-5	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	529.603856573911	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140670	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.27	chrX	-	1555	9	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	590.140820059077	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140662	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135431_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.28	chrX	-	1288	6	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_4	609.639434420051	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140645	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.29	chrX	-	4844	6	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	603.93198292523	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140616	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72134565_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.3	chrX	-	1202	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-9	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	111.870181460477	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCATGAGTCATTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	72126093	72117945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125926
ES.37115.30	chrX	-	1710	10	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	662.92256032485	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140645	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135131_72135237_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.31	chrX	-	4559	5	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	3	-1	intron_retention	FALSE	canonical	3	1129	junction_4	186.263254561924	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140620	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130980_72133005_72133105_72134464_72136911_72137788_72138689_72140586
ES.37115.32	chrX	-	3990	6	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	597.688213034187	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140622	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138429_72138689_72140586
ES.37115.33	chrX	-	1528	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	504.619153219454	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140638	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72138551_72138689_72140586
ES.37115.34	chrX	-	3838	7	NNC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	654.111016741212	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140645	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72132965_72133105_72134464_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.35	chrX	-	1747	10	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	633.396137236932	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140624	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72131048_72133005_72133105_72134464_72134565_72135131_72135242_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.36	chrX	-	1611	9	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	621.460728847769	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140645	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135373_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.37	chrX	-	1668	9	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	509.246855046744	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140655	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72131048_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.38	chrX	-	2429	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	586	junction_6	364.100344993643	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140669	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.39	chrX	-	2476	8	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	17	-1	intron_retention	FALSE	canonical	3	9	junction_2	539.960013636686	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140648	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72131048_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.4	chrX	-	7246	15	Fusion	ENSMUSG00000079845.9_ENSMUSG00000057836.13	novel	1645	9	NA	NA	-1	2	intron_retention	FALSE	canonical	3	118	junction_2	561.943420784749	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72140624	72117948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.40	chrX	-	4662	6	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	586	junction_4	383.941141322469	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72140646	72129899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72137859_72138566_72138689_72140586
ES.37115.42	chrX	-	8132	3	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_1	564.5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140623	72129900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72137859_72138551_72138689_72140586
ES.37115.43	chrX	-	4662	6	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	571.682219419145	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140632	72129900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72137859_72138551_72138689_72140586
ES.37115.44	chrX	-	3567	5	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	1	0	intron_retention	FALSE	canonical	1	6	junction_4	632.782348047099	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140622	72129900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72140586
ES.37115.45	chrX	-	1470	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	16	-1	combination_of_known_junctions	FALSE	canonical	2	52	junction_7	514.238648640008	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140649	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72140586
ES.37115.47	chrX	-	1524	9	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_5	491.933684555144	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140648	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135431_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.48	chrX	-	2523	8	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	133	junction_6	489.420607057207	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140624	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138425_72138689_72140586
ES.37115.49	chrX	-	1229	5	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	494.867153890819	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140623	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72137788_72137859_72138551_72138689_72140586
ES.37115.5	chrX	-	3760	8	Fusion	ENSMUSG00000079845.9_ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	1	intron_retention	TRUE	non_canonical	0	0	junction_1	548.01184256532	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72140623	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72118070_72130020_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.50	chrX	-	1550	9	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	529.428465422856	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140613	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140592
ES.37115.51	chrX	-	1401	7	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	542.745310640472	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140650	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72140586
ES.37115.52	chrX	-	3914	7	NNC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	10	-1	intron_retention	FALSE	canonical	3	34	junction_5	549.302790413043	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140613	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138401_72138689_72140586
ES.37115.53	chrX	-	5626	2	ISM	ENSMUSG00000057836.13	ENSMUST00000172938.2	648	3	2989	-395	2989	-1	3prime_fragment	FALSE	canonical	3	806	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72135620	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72130791_72130883
ES.37115.54	chrX	-	2547	8	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	34	junction_6	519.230435257756	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140624	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138401_72138689_72140586
ES.37115.55	chrX	-	3716	6	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_4	571.682219419145	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140650	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72138566_72138689_72140586
ES.37115.56	chrX	-	1555	9	NNC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	500.185403125681	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140622	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136914_72137801_72137859_72138566_72138689_72140586
ES.37115.57	chrX	-	3851	7	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	527.663613383459	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140637	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72137859_72138551_72138689_72140586
ES.37115.58	chrX	-	1213	5	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	491.045313591322	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140642	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72136875_72136911_72138551_72138689_72140586
ES.37115.59	chrX	-	3797	7	FSM	ENSMUSG00000057836.13	ENSMUST00000172709.8	3783	7	-17	3	-17	-1	multi-exon	FALSE	non_canonical	0	0	junction_5	560.301406982587	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72140646	72129901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.6	chrX	-	4703	5	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	5	1	intron_retention	FALSE	canonical	3	52	junction_4	45.1684347747406	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72126079	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72125674_72125988
ES.37115.61	chrX	-	2939	8	NNC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	636.622721708799	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72140623	72129903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72130791_72130883_72130980_72132460_72133105_72134464_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.63	chrX	-	2957	8	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	520.379100428971	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72140623	72129903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.64	chrX	-	7327	4	NIC	ENSMUSG00000057836.13	novel	3783	7	NA	NA	1	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	653.416151213502	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACTTGTTGGCATGAG	NA	False	NA	-11	True	AATAAA	-12	NA	72140700	72129904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.65	chrX	-	3121	7	FSM	ENSMUSG00000057836.13	ENSMUST00000172709.8	3783	7	6	656	0	-258	multi-exon	FALSE	non_canonical	0	0	junction_5	560.301406982587	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGTAGGGAACTCCA	NA	False	NA	8	True	AATAAA	-30	NA	72140623	72130554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.66	chrX	-	948	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	-23	659	-17	-261	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTCTGTAGGGAACT	NA	False	NA	5	True	AATAAA	-27	NA	72140646	72130557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.67	chrX	-	3149	2	ISM	ENSMUSG00000057836.13	ENSMUST00000172938.2	648	3	4800	271	4800	-271	3prime_fragment	FALSE	canonical	3	806	junction_1	0	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	72133809	72130567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72130791_72130883
ES.37115.68	chrX	-	932	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	46	667	10	-271	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	72140655	72130567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.69	chrX	-	3171	7	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	-2	-273	intron_retention	FALSE	canonical	3	586	junction_5	385.386674508718	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGCAGTGCAAATATGT	NA	False	NA	-7	True	AATAAA	-15	NA	72140703	72130569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138566_72138689_72140586
ES.37115.7	chrX	-	1607	10	Fusion	ENSMUSG00000079845.9_ENSMUSG00000057836.13	novel	1584	9	NA	NA	-18	1	multi-exon	TRUE	non_canonical	0	0	junction_1	589.847019296393	487	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72140647	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72117960_72129909_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.70	chrX	-	2622	5	NIC	ENSMUSG00000057836.13	novel	1584	9	NA	NA	-3	-80	intron_retention	FALSE	non_canonical	0	0	junction_3	606.500206100542	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTCCTGTCCCCCCC	NA	False	NA	NA	False	AATAAA	-18	NA	72140632	72133163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ES.37115.8	chrX	-	1182	9	NNC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	103.438085345776	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72126092	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125195_72125590_72125674_72125964
ES.37115.9	chrX	-	1158	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	106.028003376467	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72126092	72117949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125195_72125590_72125674_72125988
ES.37116.1	chrX	+	3525	5	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	-24	16	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	17.8798070459387	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGCTCTACTGATCCT	NA	False	NA	NA	False	AATAAA	-34	NA	72160628	72172884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.2	chrX	+	2871	5	FSM	ENSMUSG00000067771.10	ENSMUST00000088459.9	2864	5	-4	-3	-4	3	multi-exon	FALSE	canonical	3	20	junction_1	16.161296358894	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAGATGTCTAAGACAG	NA	False	NA	NA	False	AATAAA	-21	NA	72160648	72172871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72160742_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.3	chrX	+	2968	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	9	9	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	22.4499443206436	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTAAGACAGCTCTAC	NA	False	NA	NA	False	AATAAA	-27	NA	72160661	72172877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72160742_72166217_72166322_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.4	chrX	+	3152	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.2719636256724	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTAGATGTCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72160664	72172867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72160742_72164766_72165068_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.5	chrX	+	7492	5	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7727168473706	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCTAAGACAGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	72160673	72172875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72165384_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.6	chrX	+	2986	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	21	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	23.412817002659	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTCTAAGACAGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	72160673	72172875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72160742_72161226_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.7	chrX	+	3137	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.003333101884	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72160676	72172866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72160742_72161063_72161363_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.8	chrX	+	3549	6	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	42	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	21.0237960416286	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTAGATGTCTAAGACA	NA	False	NA	NA	False	AATAAA	-20	NA	72160694	72172870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72161363_72166217_72166322_72166673_72166742_72167034_72167132_72168423_72168590_72170424
ES.37116.9	chrX	+	2883	4	NNC	ENSMUSG00000067771.10	novel	2864	5	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.5120517668642	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGTAGATGTCTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	72166741	72172868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72166918_72167034_72167132_72168423_72168590_72170424
ES.37117.1	chrX	-	1495	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	30	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	154.494039248333	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGGTATTTGGGGTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	72161278	72151225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158860_72161230
ES.37117.10	chrX	-	1238	10	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-1	307	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	170.252100655991	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCTTTCATTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	72161309	72151707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72160623_72160755_72161284
ES.37117.12	chrX	-	1148	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	31	471	31	303	multi-exon	FALSE	canonical	3	269	junction_2	77.2438306598009	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161277	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ES.37117.13	chrX	-	998	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-17	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	154.494039248333	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161325	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158856_72161284
ES.37117.14	chrX	-	1200	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-6	303	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	178.265909177835	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161314	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72160623_72160738_72161207
ES.37117.15	chrX	-	1300	10	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	275	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	170.443502822258	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161033	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72160623_72160784_72160971
ES.37117.16	chrX	-	2321	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114520.2	867	8	-1151	-303	-1151	303	multi-exon	FALSE	canonical	3	269	junction_2	81.1275136398729	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72160120	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740
ES.37117.17	chrX	-	1327	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-721	303	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_7	148.375695242771	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72162029	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161681
ES.37117.18	chrX	-	1145	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	11	303	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	132.269551957357	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161297	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
ES.37117.19	chrX	-	1062	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-5	303	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	139.651022779159	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161313	72151711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
ES.37117.2	chrX	-	1623	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	42	-15	42	15	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGGTATTTGGGGTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	72161266	72151225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ES.37117.20	chrX	-	1128	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	32	302	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	137.187770500872	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72161276	72151712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158860_72161207
ES.37117.21	chrX	-	2378	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	11	302	intron_retention	FALSE	canonical	3	293	junction_4	71.5276455759076	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72161297	72151712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72152123_72152218_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ES.37117.22	chrX	-	1098	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	300	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	144.148144282193	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGTGCATGCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	72161325	72151714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158860_72161284
ES.37117.23	chrX	-	1065	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-893	300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	154.494039248333	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGTGCATGCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	72162201	72151714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72162112
ES.37117.24	chrX	-	2899	7	ISM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	416	566	416	208	3prime_fragment	FALSE	canonical	3	293	junction_4	79.3928348292352	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTTGACTTTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	72160892	72151806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740
ES.37117.3	chrX	-	3040	7	ISM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	854	-13	854	13	3prime_fragment	FALSE	canonical	3	293	junction_4	79.3928348292352	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGAGGTATTTGGGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	72160454	72151227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740
ES.37117.4	chrX	-	1588	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	295	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	145.274524607723	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTGTGTTCAGCACAT	NA	False	NA	NA	False	ATTAAA	-11	NA	72161013	72151243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72160971
ES.37117.5	chrX	-	1106	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-18	311	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTCATTTCTCATGA	NA	False	NA	NA	False	AATAAA	-22	NA	72161326	72151703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ES.37117.6	chrX	-	1127	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	-17	311	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTCATTTCTCATGA	NA	False	NA	NA	False	AATAAA	-22	NA	72161325	72151703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ES.37117.8	chrX	-	998	6	NIC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	-19	311	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	160.759447622838	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTCATTTCTCATGA	NA	False	NA	NA	False	AATAAA	-22	NA	72158988	72151703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72152123_72152218_72152324_72155796_72155918_72156950_72156986_72158152_72158223_72158740
ES.37117.9	chrX	-	1185	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	8	309	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_8	130.918629308437	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTTCATTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	72161300	72151705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161199
ES.37118.1	chrX	+	1023	8	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	-18	308	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	175.455093388361	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72192383	72202007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72192426_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
ES.37118.2	chrX	+	1569	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	-3	13	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGAGGTATTTGGGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	72192398	72202491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
ES.37118.3	chrX	+	1172	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	9	471	9	308	multi-exon	TRUE	canonical	3	121	junction_8	146.338167868127	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72192410	72202007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ES.37118.4	chrX	+	1078	8	NNC	ENSMUSG00000072479.11	novel	864	8	NA	NA	25	306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.488769996389	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72192426	72202005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72192511_72194816_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
ES.37118.5	chrX	+	1023	8	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	31	307	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	208.551271041586	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	72192432	72202006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72192480_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201598
ES.37118.6	chrX	+	2372	8	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	42	314	intron_retention	FALSE	canonical	3	52	junction_1	175.313130933057	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTCATTTCTCATGA	NA	False	NA	NA	False	AATAAA	-22	NA	72192443	72202013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72192511_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72201499_72201594
ES.37118.7	chrX	+	1625	9	NNC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	42	7	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	174.785582929485	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCACATATGAGGTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	72192443	72202485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72192511_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ES.37118.8	chrX	+	4313	7	NIC	ENSMUSG00000072479.11	novel	864	8	NA	NA	416	308	intron_retention	FALSE	canonical	3	121	junction_6	144.003086386677	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72192817	72202007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72201499_72201594
ES.37118.9	chrX	+	3786	8	NNC	ENSMUSG00000072479.11	novel	864	8	NA	NA	478	308	intron_retention	FALSE	canonical	1	3	junction_1	196.279475883398	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72192879	72202007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72194199_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72200175_72201393_72201499_72201594
ES.37119.1	chrX	-	3029	6	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	-13	18	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	23.2860473245246	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGCTCTACTGATCCT	NA	False	NA	NA	False	AATAAA	-34	NA	72193069	72180819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192347_72192484_72192967
ES.37119.6	chrX	-	2958	6	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	22.5122189044083	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTAGATGTCTAAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	72193045	72180834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72187382_72187487_72192967
ES.37119.7	chrX	-	2843	5	FSM	ENSMUSG00000071745.2	ENSMUST00000080324.4	2862	5	22	-3	22	3	multi-exon	FALSE	canonical	3	17	junction_4	17.5499287747842	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTAGATGTCTAAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	72193034	72180834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72192967
ES.37119.8	chrX	-	3081	7	NNC	ENSMUSG00000071745.2	novel	2862	5	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	23.4662878757307	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTAGATGTCTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	72193034	72180836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72183280_72185114_72185281_72186572_72186670_72186962_72187031_72187382_72187487_72192347_72192484_72192967
ES.3712.1	chr10	-	4750	16	FSM	ENSMUSG00000035948.14	ENSMUST00000165067.9	4696	16	-54	0	12	0	multi-exon	TRUE	canonical	0	0	junction_3	0.748331477354788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGCGACAATTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	106959498	106769377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_106772094_106773004_106773181_106773264_106773365_106784516_106784640_106787834_106787917_106798822_106798887_106802808_106802905_106824666_106824771_106840524_106840677_106859514_106859611_106859717_106859799_106881073_106881215_106885224_106885360_106889188_106889378_106920667_106920813_106959148
ES.3712.2	chr10	-	2581	13	ISM	ENSMUSG00000035948.14	ENSMUST00000165067.9	4696	16	-86	14348	-1	-14348	5prime_fragment	FALSE	canonical	0	0	junction_2	0.721687836487032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGTTCTAATGTTGA	NA	False	NA	NA	False	AATATA	-21	NA	106959530	106783725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_106784640_106787834_106787917_106798822_106798887_106802808_106802905_106824666_106824771_106840524_106840677_106859514_106859611_106859717_106859799_106881073_106881215_106885224_106885360_106889188_106889378_106920667_106920813_106959148
ES.3712.3	chr10	-	2278	13	ISM	ENSMUSG00000035948.14	ENSMUST00000165067.9	4696	16	-57	14622	9	-14622	5prime_fragment	FALSE	canonical	0	0	junction_2	0.721687836487032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGAATTTCATCAGTG	NA	False	NA	NA	False	NA	NA	NA	106959501	106783999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_106784640_106787834_106787917_106798822_106798887_106802808_106802905_106824666_106824771_106840524_106840677_106859514_106859611_106859717_106859799_106881073_106881215_106885224_106885360_106889188_106889378_106920667_106920813_106959148
ES.37120.1	chrX	+	2052	10	NNC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	-17190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	562.18838282001	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72218622	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72218976_72235526_72235681_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.10	chrX	+	8426	4	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	-20	389	intron_retention	FALSE	canonical	3	1084	junction_1	278.773504240749	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTGAATGTCTCCTAC	NA	False	NA	NA	False	AATAAA	-16	NA	72235792	72246925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72245552_72245645
ES.37120.11	chrX	+	4019	4	ISM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	-20	3240	-20	-3230	5prime_fragment	FALSE	canonical	3	979	junction_3	214.802751896297	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCCCCCCCCCTCA	NA	False	NA	NA	False	AATAAA	-24	NA	72235792	72243296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547
ES.37120.12	chrX	+	1879	10	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_6	555.292537739466	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235792	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241488_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.13	chrX	+	3799	7	FSM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	-20	1	-20	0	multi-exon	FALSE	canonical	3	979	junction_3	266.969203384127	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235792	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.14	chrX	+	3784	7	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	856	junction_4	309.180457913426	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235792	72246536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72243451_72245455_72245552_72245645
ES.37120.15	chrX	+	3113	7	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-20	-661	intron_retention	FALSE	canonical	3	856	junction_4	309.180457913426	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGCAGTGCAAATATGT	NA	False	NA	NA	False	AATAAA	-15	NA	72235792	72245865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72243451_72245455_72245552_72245645
ES.37120.16	chrX	+	1376	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-34	222	-19	-222	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGCTTAATTCACC	NA	False	NA	NA	False	ATTAAA	-34	NA	72235793	72246304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.17	chrX	+	2284	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	473.64035670538	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235793	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.18	chrX	+	4186	7	FSM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	-16	-390	-16	390	multi-exon	FALSE	canonical	3	979	junction_3	266.969203384127	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAATGTCTCCTACT	NA	False	NA	NA	False	AATAAA	-17	NA	72235796	72246926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.19	chrX	+	5782	6	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	856	junction_4	337.884240532168	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235796	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72245552_72245645
ES.37120.2	chrX	+	2947	1	Antisense	novelGene_ENSMUSG00000079566.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGTAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	72219597	72222544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_72219600_72222500
ES.37120.20	chrX	+	2978	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	836	junction_4	290.706739108789	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235796	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.21	chrX	+	1748	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-13	-659	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72235799	72245867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.22	chrX	+	2447	8	NNC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	-4	0	intron_retention	FALSE	canonical	3	33	junction_6	504.720532895711	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235808	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243491_72245455_72245552_72245645
ES.37120.23	chrX	+	923	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-18	659	-3	-659	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72235809	72245867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.24	chrX	+	2800	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-3	393	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGTCTCCTACTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72235809	72246929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.25	chrX	+	1492	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	505.773079713883	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235809	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72245455_72245552_72245645
ES.37120.26	chrX	+	4741	5	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1084	junction_1	150.509758819819	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235816	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72241992_72243351_72243451_72245455
ES.37120.27	chrX	+	2942	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	836	junction_5	316.613264383654	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235816	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72243451_72245455_72245552_72245645
ES.37120.28	chrX	+	3677	6	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_4	586.43512855217	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72245455_72245552_72245645
ES.37120.29	chrX	+	1602	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	482.944872630407	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTTGGCATGAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	72235816	72246532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241870_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.3	chrX	+	1704	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-125	-15	-110	5	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATGAGTCATTTAATTG	NA	False	NA	NA	False	AATAAA	-23	NA	72235702	72246541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.30	chrX	+	1622	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_7	477.42610684796	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235816	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243491_72245455_72245552_72245645
ES.37120.31	chrX	+	1576	8	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	516.453565883987	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235817	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72240928_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.32	chrX	+	1974	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	-10	-400	1	390	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAATGTCTCCTACT	NA	False	NA	NA	False	AATAAA	-17	NA	72235817	72246926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.33	chrX	+	2098	10	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	547.549851160762	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235817	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241732_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.35	chrX	+	2485	8	NNC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	85	0	intron_retention	FALSE	canonical	2	2	junction_1	515.627337347825	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235912	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72236038_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.36	chrX	+	1626	9	NNC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	129	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	487.938200492644	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235956	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72236038_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.37	chrX	+	1511	2	ISM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	8433	661	8433	-661	3prime_fragment	FALSE	canonical	3	1764	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGCAGTGCAAATATGT	NA	False	NA	NA	False	AATAAA	-15	NA	72244260	72245865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72245552_72245645
ES.37120.4	chrX	+	2449	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-41	4	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGAGTCATTTAATT	NA	False	NA	NA	False	AATAAA	-22	NA	72235771	72246540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ES.37120.5	chrX	+	7185	5	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	-41	0	intron_retention	FALSE	canonical	3	979	junction_3	313.815531005079	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235771	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72245552_72245645
ES.37120.6	chrX	+	2169	10	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	610.400415028256	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	72235786	72246533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241732_72241891_72241992_72243351_72243491_72245455_72245552_72245645
ES.37120.7	chrX	+	6037	5	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	1084	junction_1	267.680196316425	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235786	72246535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72243451_72245455_72245552_72245645
ES.37120.8	chrX	+	5159	6	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	979	junction_3	287.13132883752	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72235791	72246534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72243451_72245455_72245552_72245645
ES.37120.9	chrX	+	2694	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	-20	390	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_7	575.026955889896	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAATGTCTCCTACT	NA	False	NA	NA	False	AATAAA	-17	NA	72235792	72246926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241732_72241891_72241992_72243351_72243491_72245455_72245552_72245645
ES.37121.1	chrX	-	1271	2	FSM	ENSMUSG00000079566.2	ENSMUST00000114517.2	1015	2	-230	-26	-230	26	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGCTCAGGTTGCTGT	NA	False	NA	NA	False	AATAAA	-40	NA	72220825	72218881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72219726_72220398
ES.37122.1	chrX	+	4384	5	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	151	junction_4	41.8807831827438	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257890	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258962_72259646_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.10	chrX	+	1181	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	18	1	17	-1	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257972	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.11	chrX	+	1068	8	ISM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	423	1	340	-1	3prime_fragment	FALSE	canonical	3	151	junction_7	61.3883589310294	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72258377	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.12	chrX	+	4381	4	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	546	4	intron_retention	FALSE	canonical	3	151	junction_3	48.1940521918075	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGAGTCATTTAATT	NA	False	NA	22	True	AATAAA	-22	NA	72258583	72266063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.13	chrX	+	3212	1	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	879	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72262847	72266059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72262800_72266100
ES.37122.14	chrX	+	2201	2	ISM	ENSMUSG00000067768.13	ENSMUST00000081827.4	1077	9	5703	-2	1772	-1	3prime_fragment	FALSE	canonical	3	151	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72263740	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72265569_72265685
ES.37122.2	chrX	+	1216	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	-25	-1	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	78.4071903590481	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257913	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258064_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.3	chrX	+	1178	9	NIC	ENSMUSG00000067768.13	novel	1200	9	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	102.689382971172	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257915	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258064_72258379_72258427_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.4	chrX	+	1587	8	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	4	4	intron_retention	FALSE	canonical	3	74	junction_1	86.4041287751214	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATGAGTCATTTAATT	NA	False	NA	22	True	AATAAA	-22	NA	72257942	72266063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258088_72258379_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.5	chrX	+	1874	7	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	4	-1	intron_retention	FALSE	canonical	3	151	junction_6	64.746728789097	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257942	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.6	chrX	+	4040	6	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	4	-1	intron_retention	FALSE	canonical	3	74	junction_1	67.041479697274	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	17	True	AATAAA	-17	NA	72257942	72266058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258088_72258379_72258962_72259646_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.7	chrX	+	2401	7	NIC	ENSMUSG00000067768.13	novel	1077	9	NA	NA	4	0	intron_retention	FALSE	canonical	3	85	junction_1	77.3534456605235	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	15	True	AATAAA	-15	NA	72257942	72266056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258064_72258379_72258962_72259646_72259716_72261328_72262392_72263579_72263679_72265472_72265569_72265685
ES.37122.8	chrX	+	6195	3	NIC	ENSMUSG00000067768.13	novel	1744	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	151	junction_2	31	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257953	72266059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72263679_72265472_72265569_72265685
ES.37122.9	chrX	+	3994	6	NIC	ENSMUSG00000067768.13	novel	1077	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	85	junction_1	63.4400504413419	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	15	True	AATAAA	-15	NA	72257962	72266056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72258064_72258379_72258962_72259646_72262392_72263579_72263679_72265472_72265569_72265685
ES.37123.1	chrX	-	176	1	Intergenic	novelGene_30386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGATGGAGAA	5541	False	NA	NA	False	NA	NA	NA	72269211	72269035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72269000_72269200
ES.37124.1	chrX	+	1709	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	-195	991	-195	-991	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCCTTTTCTTTTG	NA	False	NA	18	True	NA	NA	NA	72271701	72273410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72271700_72273400
ES.37124.2	chrX	+	2196	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	19	290	19	-290	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGTTTCTGACTGA	NA	False	NA	NA	False	NA	NA	NA	72271915	72274111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72271900_72274100
ES.37125.1	chrX	-	3376	1	Antisense	novelGene_ENSMUSG00000078317.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTATTCCTCAGT	1940	False	NA	NA	False	AATAAA	-17	NA	72272812	72269436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_72269400_72272800
ES.37126.1	chrX	-	1948	8	NIC	ENSMUSG00000031362.18	novel	1500	9	NA	NA	-14	3	intron_retention	FALSE	canonical	3	63	junction_1	109.115553802529	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTTTGAATGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	72286688	72277290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72286267_72286581
ES.37126.10	chrX	-	4670	5	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	63	junction_1	87.5995861862372	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286685	72277684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72286267_72286581
ES.37126.11	chrX	-	2441	7	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	5	-2	intron_retention	FALSE	canonical	3	63	junction_1	100.045684009301	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72286731	72277686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72283332_72284921_72284991_72285673_72286267_72286581
ES.37126.12	chrX	-	4009	6	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	27	-2	intron_retention	FALSE	canonical	3	63	junction_1	85.9362554455336	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	72286709	72277686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72284991_72285673_72286267_72286581
ES.37126.14	chrX	-	5883	4	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	23	-4	intron_retention	FALSE	canonical	3	63	junction_1	45.8427263102398	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACTTGTTGGCATGA	NA	False	NA	-12	True	AATAAA	-11	NA	72286713	72277688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72286267_72286581
ES.37126.15	chrX	-	2045	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-1	-460	-1	460	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCCAGTGTTGAATT	NA	False	NA	NA	False	AATATA	-17	NA	72308997	72297685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.16	chrX	-	4183	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-12	393	intron_retention	FALSE	canonical	3	944	junction_2	356.51012920003	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTGAATGTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	72309008	72297752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.17	chrX	-	5153	6	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-15	2	intron_retention	FALSE	canonical	3	944	junction_2	389.309337160053	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309011	72298143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.18	chrX	-	4676	6	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-13	2	intron_retention	FALSE	canonical	3	944	junction_2	311.498314602182	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-6	True	AATAAA	-18	NA	72309009	72298143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72306099_72306921_72307059_72308956
ES.37126.19	chrX	-	1650	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	-65	-1	-65	1	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309061	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.2	chrX	-	1229	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	-3	-6	-3	6	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCATGAGTCATTTAAT	NA	False	NA	-2	True	AATAAA	-21	NA	72286739	72277678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
ES.37126.20	chrX	-	2429	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	11	1	intron_retention	FALSE	canonical	1	2	junction_2	578.697234999372	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72308985	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301201_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.21	chrX	-	2371	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	2	1	intron_retention	FALSE	canonical	1	2	junction_2	669.942093141837	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72308994	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301201_72301341_72302698_72303665_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.22	chrX	-	2265	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	543.546901725141	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309021	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72302958_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.23	chrX	-	2069	11	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-9755	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	638.341985145893	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72318751	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72309120_72309275_72309371_72309495_72318504
ES.37126.24	chrX	-	3804	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-25	1	intron_retention	FALSE	canonical	3	944	junction_2	356.51012920003	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309021	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.25	chrX	-	3906	7	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	35	1	intron_retention	FALSE	canonical	2	2	junction_6	605.431710067746	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72308961	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308794
ES.37126.27	chrX	-	2478	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-78	1	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309074	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.28	chrX	-	3665	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	10	1	intron_retention	FALSE	non_canonical	0	0	junction_1	561.230899406812	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72308986	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72298190_72298293_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.29	chrX	-	2327	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-65	1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	540.874523341597	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309061	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303476_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.3	chrX	-	5250	11	Fusion	ENSMUSG00000058147.2_ENSMUSG00000031362.18	novel	1584	9	NA	NA	-10275	2	intron_retention	TRUE	non_canonical	0	0	junction_1	684.652583431918	330	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72319271	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72277819_72298279_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72309120_72309225_72309371_72311700_72318814
ES.37126.30	chrX	-	3772	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-14	1	intron_retention	FALSE	canonical	3	686	junction_3	424.672586300971	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72309010	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.31	chrX	-	2269	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	647.682684171038	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-7	True	AATAAA	-17	NA	72308985	72298144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301201_72301341_72302698_72302799_72302958_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.32	chrX	-	1611	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	530.270670860646	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72309007	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303749_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.33	chrX	-	3391	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-18	-1	intron_retention	FALSE	canonical	2	44	junction_4	548.852941160388	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72309014	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303202_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.34	chrX	-	1570	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	348	junction_7	388.473595466925	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72308998	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306936_72307059_72308956
ES.37126.35	chrX	-	2929	3	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	4353	-1	intron_retention	FALSE	canonical	3	32	junction_2	463	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72304643	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72302698
ES.37126.36	chrX	-	1488	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	632.716353807138	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72308989	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303202_72303233_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.37	chrX	-	1570	9	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	468.995852193812	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72308992	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306090_72306921_72307059_72308956
ES.37126.38	chrX	-	1633	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	600.2778986066	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-9	True	AATAAA	-15	NA	72309016	72298146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303202_72303233_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.4	chrX	-	1580	10	Fusion	ENSMUSG00000058147.2_ENSMUSG00000031362.18	novel	1584	9	NA	NA	5	2	multi-exon	TRUE	non_canonical	0	0	junction_1	515.324517197359	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72308991	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72277693_72298154_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.41	chrX	-	2779	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-9703	-2	intron_retention	FALSE	canonical	2	4	junction_8	672.437027204448	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTTGGCATGAGTC	NA	False	NA	-10	True	AATAAA	-14	NA	72318699	72298147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72309120_72309225_72309371_72309495_72318504
ES.37126.42	chrX	-	1862	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-761	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	608.085520301216	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-11	True	AATAAA	-13	NA	72309757	72298148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72309120_72309225_72309540
ES.37126.44	chrX	-	2138	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	676.619478264812	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-11	True	AATAAA	-13	NA	72308997	72298148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72302698_72302799_72302958_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.46	chrX	-	2537	8	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_5	503.149630845942	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGCATGAGT	NA	False	NA	-11	True	AATAAA	-13	NA	72308995	72298148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305288_72306028_72306099_72306921_72307059_72308956
ES.37126.47	chrX	-	1746	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	-12	-665	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGCAAATATGTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	72309008	72298810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.48	chrX	-	1436	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	0	-665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	609.108415414198	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTGCAAATATGTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	72308996	72298810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72302958_72303476_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.49	chrX	-	3111	7	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	0	-667	intron_retention	FALSE	canonical	3	944	junction_2	356.51012920003	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72308996	72298812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.5	chrX	-	1219	9	NNC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	110.415125775412	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286709	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286557
ES.37126.6	chrX	-	3768	8	Fusion	ENSMUSG00000058147.2_ENSMUSG00000031362.18	novel	1584	9	NA	NA	10	2	intron_retention	TRUE	canonical	1	1	junction_1	560.947922207197	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72308986	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72277774_72298236_72299035_72299128_72299225_72301241_72301341_72302698_72305146_72306028_72306099_72306921_72307059_72308956
ES.37126.7	chrX	-	1109	9	FSM	ENSMUSG00000031362.18	ENSMUST00000068551.9	1500	9	2	389	2	2	multi-exon	FALSE	canonical	1	2	junction_7	125.099897581893	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286672	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285789_72286219_72286267_72286581
ES.37126.8	chrX	-	3298	7	NNC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	24	2	intron_retention	FALSE	canonical	2	9	junction_6	122.996951181726	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	-6	True	AATAAA	-17	NA	72286712	72277682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72284991_72285673_72286267_72286453
ES.37126.9	chrX	-	1568	8	NIC	ENSMUSG00000031362.18	novel	1220	9	NA	NA	-28	0	intron_retention	FALSE	canonical	3	63	junction_1	109.115553802529	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286702	72277684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72286267_72286581
ES.37127.1	chrX	+	3034	5	Genic_Genomic	ENSMUSG00000082629.4	novel	2403	1	NA	NA	-5248	7767	multi-exon	TRUE	non_canonical	0	0	junction_1	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72335950	72351368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_72336018_72338374_72338735_72339077_72339243_72341198_72343600_72351327
ES.37128.1	chrX	-	1627	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	42	-13	42	13	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGAGGTATTTGGGGT	NA	False	NA	NA	False	ATTAAA	-27	NA	72336540	72326488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ES.37128.10	chrX	-	1031	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	23	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	162.079345648094	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGTGCATGCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	72336559	72326977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72330297_72330394_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336504
ES.37128.11	chrX	-	1015	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	272	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.844839499686	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTGTGCATGCTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	72336310	72326977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72330297_72330394_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336271
ES.37128.2	chrX	-	1539	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	29	11	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATATGAGGTATTTGGG	NA	False	NA	NA	False	ATTAAA	-25	NA	72336553	72326490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ES.37128.3	chrX	-	1599	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_8	149.667913645511	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCAGCACATATGAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	72336599	72326498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
ES.37128.4	chrX	-	1176	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	11	469	11	-469	multi-exon	FALSE	canonical	3	126	junction_7	127.059963698248	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCTTTCATTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	72336571	72326970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ES.37128.5	chrX	-	1123	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-15	-471	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_8	149.667913645511	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	72336597	72326972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
ES.37128.6	chrX	-	1114	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	18	-472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	192.90347327096	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCATGCTTTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	72336564	72326973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72335899_72335947_72336481
ES.37128.7	chrX	-	1079	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	5	-473	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336577	72326974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ES.37128.8	chrX	-	1224	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	715	-473	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	167.542485283584	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72335867	72326974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72335725
ES.37128.9	chrX	-	1196	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	-6	-474	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_8	159.15946209698	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGCATGCTTTCAT	NA	False	NA	NA	False	AATAAA	-13	NA	72336588	72326975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336473
ES.37129.1	chrX	-	6858	1	Intergenic	novelGene_30387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72350501	72343643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72343600_72350500
ES.3713.1	chr10	-	147	1	Intergenic	novelGene_2823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	107411591	107411444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_107411400_107411600
ES.37130.1	chrX	-	174	1	Intergenic	novelGene_30388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATAAAAAGAGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	72355172	72354998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72355000_72355200
ES.37131.1	chrX	+	175	1	Intergenic	novelGene_30389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	72368362	72368537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72368400_72368500
ES.37132.1	chrX	+	5972	7	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	13.6829171678492	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386174	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826_72396928_72397383
ES.37132.11	chrX	+	5856	5	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	12.6762573340872	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386237	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395485_72397188
ES.37132.12	chrX	+	2413	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	22	-3384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4146276229466	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATTGTGATGTTATTT	NA	False	NA	NA	False	NA	NA	NA	72386248	72399302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386349_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
ES.37132.13	chrX	+	5709	3	NNC	ENSMUSG00000031365.14	novel	6284	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.5	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386250	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388495_72397136
ES.37132.15	chrX	+	7337	4	ISM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	1030	2	-817	-2	3prime_fragment	FALSE	canonical	3	19	junction_1	11.115554667022	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGTCTTTCTTGACTCA	NA	False	NA	10	True	NA	NA	NA	72387256	72402684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72388519_72395414_72395530_72396441_72396544_72396826
ES.37132.16	chrX	+	9162	1	Genic_Genomic	ENSMUSG00000031365.14	novel	NA	NA	NA	NA	9794	4343	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACCTCAGTTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	72397867	72407029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_72397900_72407000
ES.37132.2	chrX	+	5870	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	11.6206712370672	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386184	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
ES.37132.3	chrX	+	6331	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	-41	-6	-41	6	multi-exon	FALSE	canonical	3	19	junction_2	9.63068014212911	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGACTCATTTCATCC	NA	False	NA	18	True	NA	NA	NA	72386185	72402692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
ES.37132.4	chrX	+	6403	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.4146276229466	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGGTCTTTCTTGACTC	NA	False	NA	9	True	NA	NA	NA	72386198	72402683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386908_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
ES.37132.5	chrX	+	5901	7	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	20.0450880655475	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGGTCTTTCTTGACTC	NA	False	NA	9	True	NA	NA	NA	72386198	72402683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72391239_72391290_72395414_72395530_72396441_72396544_72396826_72396926_72397383
ES.37132.6	chrX	+	6317	5	NNC	ENSMUSG00000031365.14	novel	6284	5	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.3683928893037	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386219	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396415_72396544_72396826
ES.37132.7	chrX	+	6214	4	NIC	ENSMUSG00000031365.14	novel	6284	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	19.4821855949366	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386220	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72386358_72395414_72395530_72396441_72396544_72396826
ES.37132.8	chrX	+	6379	6	FSM	ENSMUSG00000031365.14	ENSMUST00000033731.4	6376	6	-1	-2	-1	2	multi-exon	FALSE	canonical	3	12	junction_2	13.9226434271657	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTTCTTGACTCATTTC	NA	False	NA	14	True	NA	NA	NA	72386225	72402688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826
ES.37132.9	chrX	+	5848	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.1364776376578	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386232	72402686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396415_72396544_72396826_72396928_72397383
ES.37133.1	chrX	+	6100	1	Intergenic	novelGene_30390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGAACTATGGCTCTT	NA	False	NA	NA	False	ATTAAA	-24	NA	72429830	72435930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72429800_72435900
ES.37134.1	chrX	-	3755	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-3022	1253	multi-exon	FALSE	canonical	3	30	junction_1	0	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCACCACTTCCTTG	NA	False	NA	1	True	AATAAA	-19	NA	72445364	72438791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_72442387_72445204
ES.37134.2	chrX	-	3900	3	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-3000	1252	multi-exon	FALSE	canonical	0	0	junction_1	0.5	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACCACTTCCTT	NA	False	NA	0	True	AATAAA	-18	NA	72445342	72438792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_72442387_72444166_72444335_72445204
ES.37134.3	chrX	-	1489	2	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	1303	1250	multi-exon	FALSE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTCACCACTTCC	NA	False	NA	-2	True	AATAAA	-16	NA	72441039	72438794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_72440166_72440921
ES.37134.4	chrX	-	2525	3	Genic_Genomic	ENSMUSG00000096966.3	novel	2298	1	NA	NA	-2983	1250	multi-exon	TRUE	non_canonical	0	0	junction_1	15	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTCACCACTTCC	NA	False	NA	-2	True	AATAAA	-16	NA	72445325	72438794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_72440503_72441690_72442387_72445204
ES.37135.1	chrX	-	1534	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	-141	-13	-141	13	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACTGTTTGTGCATATC	NA	False	NA	1	True	AATAAA	-30	NA	72502791	72480907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ES.37135.10	chrX	-	2210	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	43	0	intron_retention	FALSE	non_canonical	0	0	junction_6	233.801435220383	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502607	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498031_72498085_72498472_72498541_72501579_72501696_72502440
ES.37135.12	chrX	-	1282	9	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	34	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	186.570655181891	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502616	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72498472_72498541_72501579_72501696_72502440
ES.37135.2	chrX	-	4452	7	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	14	0	intron_retention	FALSE	canonical	3	498	junction_4	41.7442610826127	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502636	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72492509_72496604_72498541_72501579_72501696_72502440
ES.37135.3	chrX	-	2092	8	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_4	200.916776353813	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502634	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ES.37135.4	chrX	-	1021	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	9	2	9	0	multi-exon	FALSE	canonical	3	30	junction_3	203.601462557506	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502641	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ES.37135.5	chrX	-	5053	3	ISM	ENSMUSG00000031371.15	ENSMUST00000131140.2	502	4	-4337	0	-4337	0	intron_retention	FALSE	canonical	3	534	junction_2	19.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72495222	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72481172_72489415_72489531_72490533
ES.37135.6	chrX	-	2728	10	NNC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.161570952118	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502582	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72498085_72498472_72498541_72501579_72501696_72502440
ES.37135.7	chrX	-	2102	8	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	36	0	intron_retention	FALSE	canonical	2	4	junction_5	199.394696263364	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502614	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72498472_72498541_72501579_72501696_72502440
ES.37135.8	chrX	-	820	6	NIC	ENSMUSG00000031371.15	novel	1032	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	232.764773967196	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502650	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ES.37135.9	chrX	-	2188	9	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	498	junction_5	41.9545885452354	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGCCTTCGGACTA	NA	False	NA	-14	True	AATAAA	-15	NA	72502638	72480922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ES.37136.1	chrX	+	2341	8	NIC	ENSMUSG00000031375.18	novel	828	6	NA	NA	-2212	0	intron_retention	TRUE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGAGTCTGTGTGCCAG	NA	False	NA	NA	False	ATTAAA	-13	NA	72533450	72539535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72533538_72534384_72534637_72534923_72535037_72535553_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ES.37137.1	chrX	+	4547	21	NNC	ENSMUSG00000031376.16	novel	3894	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.42828568570857	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGTAGCTTTTTGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	72546694	72601820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72546941_72566440_72566769_72572250_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72577490_72577533_72578961_72579127_72579737_72579953_72580490_72580734_72581681_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658_72598842_72600981
ES.37137.2	chrX	+	4013	21	ISM	ENSMUSG00000031376.16	ENSMUST00000114479.2	4637	22	46	10794	46	1997	5prime_fragment	FALSE	canonical	0	0	junction_5	1.42828568570857	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCGGACCTTTCGTC	NA	False	NA	NA	False	NA	NA	NA	72546737	72603817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72546941_72566440_72566769_72572250_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72577490_72577533_72578961_72579127_72579737_72579953_72580490_72580734_72581681_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658_72598842_72603469
ES.37138.1	chrX	+	2727	4	NNC	ENSMUSG00000031383.9	novel	2722	4	NA	NA	-3909	2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	276.791538085173	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTTGTTGCTTCTTGG	NA	False	NA	30	True	AATAAA	-24	NA	72679115	72687122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72679342_72683798_72684411_72684952_72685409_72685689
ES.37138.2	chrX	+	2773	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-49	-2	-49	2	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTTGTTGCTTCTTGG	NA	False	NA	30	True	AATAAA	-24	NA	72682975	72687122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
ES.37138.3	chrX	+	3012	3	ISM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	-11	2	-11	-2	intron_retention	FALSE	canonical	3	583	junction_1	11.5	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGAGGTTGTTGCTTC	NA	False	NA	26	True	AATAAA	-20	NA	72683013	72687118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72683248_72683798_72684411_72684952
ES.37138.4	chrX	+	3498	2	ISM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	43	4	43	-4	intron_retention	FALSE	canonical	3	583	junction_1	0	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGAGAGGTTGTTGCT	NA	False	NA	24	True	AATAAA	-18	NA	72683067	72687116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72683248_72683798
ES.37138.5	chrX	+	3197	3	NIC	ENSMUSG00000031383.9	novel	2722	4	NA	NA	65	-2	intron_retention	FALSE	canonical	3	583	junction_1	3.5	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAGAGGTTGTTGCTTC	NA	False	NA	26	True	AATAAA	-20	NA	72683089	72687118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72683248_72683798_72685409_72685689
ES.37138.7	chrX	+	2679	3	ISM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	588	6	588	-6	3prime_fragment	FALSE	canonical	3	590	junction_2	8	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAACAGAGAGGTTGTTG	NA	False	NA	22	True	AATAAA	-16	NA	72683612	72687114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72684411_72684952_72685409_72685689
ES.37139.1	chrX	+	178	1	Intergenic	novelGene_30391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGAAAAAGACAAAGAT	NA	False	NA	NA	False	NA	NA	NA	72691295	72691473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72691300_72691500
ES.3714.1	chr10	+	175	1	Intergenic	novelGene_2824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGATGCAAA	NA	False	NA	NA	False	NA	NA	NA	107514355	107514530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_107514400_107514500
ES.37140.1	chrX	+	3101	2	Intergenic	novelGene_30392	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCCACATCACCCACTA	NA	False	NA	NA	False	NA	NA	NA	72695239	72698547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72698171_72698377
ES.37141.1	chrX	-	3238	10	NNC	ENSMUSG00000002012.14	novel	1536	12	NA	NA	-57	8334	intron_retention	FALSE	canonical	0	0	junction_1	33.8748604844287	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTATAAGTGGCTCT	NA	False	NA	NA	False	NA	NA	NA	72703491	72691265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72692457_72699853_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701325_72701450_72701624_72701764_72701859_72701935_72702293
ES.37141.10	chrX	-	1419	12	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	22.5282192185052	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703661	72699600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700899_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.11	chrX	-	1435	11	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.4693060658034	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703461	72699600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72699989_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703385
ES.37141.12	chrX	-	1792	10	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	21	-19	intron_retention	FALSE	canonical	3	38	junction_9	14.0035268926117	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGACAAACAGAACCA	NA	False	NA	-22	True	NA	NA	NA	72703702	72699619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.14	chrX	-	1421	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	22	-19	combination_of_known_splicesites	TRUE	canonical	2	5	junction_10	21.6148097377701	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGACAAACAGAACCA	NA	False	NA	-22	True	NA	NA	NA	72703701	72699619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72703624
ES.37141.2	chrX	-	1552	12	NNC	ENSMUSG00000002012.14	novel	868	7	NA	NA	26	5291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1134464102322	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAACAGACTGAAGCAATT	NA	False	NA	NA	False	AATATA	-32	NA	72703697	72694308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72694747_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.3	chrX	-	1531	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	4	-3	4	2	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	0	True	AATAAA	-17	NA	72703719	72699597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.4	chrX	-	1546	11	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	30	2	intron_retention	FALSE	canonical	3	12	junction_1	21.2228650280776	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	0	True	AATAAA	-17	NA	72703693	72699597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.5	chrX	-	1417	12	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	65	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.4110648974504	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGCTGAACTGGGTG	NA	False	NA	0	True	AATAAA	-17	NA	72703658	72699597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ES.37141.7	chrX	-	1345	11	NIC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	57	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	23.6137671708688	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCTGAACTGGGT	NA	False	NA	-1	True	AATAAA	-16	NA	72703666	72699598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702785_72702856_72703624
ES.37141.8	chrX	-	1576	12	NNC	ENSMUSG00000002012.14	novel	1492	12	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_11	24.5868338078374	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703467	72699599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
ES.37141.9	chrX	-	1822	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	-331	1	62	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703661	72699600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
ES.37142.1	chrX	+	4022	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-705	-3	-70	3	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGTTTCTGCTTCTCT	NA	False	NA	33	True	AATAAA	-23	NA	72716685	72726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.10	chrX	+	5553	11	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	365	junction_7	40.7829621288106	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716754	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.11	chrX	+	3784	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	12	-4	intron_retention	FALSE	canonical	0	0	junction_11	124.210842253538	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716767	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724259_72724282_72724565
ES.37142.13	chrX	+	3922	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	13	15	intron_retention	FALSE	canonical	3	360	junction_3	44.3930602870865	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGCCTCTCCTCCCCAC	NA	False	NA	24	True	AATAAA	-30	NA	72716768	72724912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.14	chrX	+	3796	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	14	-4	intron_retention	FALSE	canonical	3	40	junction_4	118.785590577837	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716769	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.15	chrX	+	5633	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	14	0	intron_retention	FALSE	canonical	3	365	junction_6	42.1885830908064	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716769	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.16	chrX	+	4008	11	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	14	7	intron_retention	FALSE	canonical	3	360	junction_3	45.4643816630118	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAATAGATGCCTCTC	NA	False	NA	16	True	AATAAA	-22	NA	72716769	72724904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.17	chrX	+	2591	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	14	2	intron_retention	FALSE	canonical	3	40	junction_4	118.785590577837	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACCAAAAATAGATGC	NA	False	NA	11	True	AATAAA	-17	NA	72716769	72724899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.18	chrX	+	4355	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716770	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.19	chrX	+	5596	9	NIC	ENSMUSG00000019558.15	novel	3964	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	360	junction_3	32.4131049885691	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716770	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723841_72723937_72724039_72724110
ES.37142.20	chrX	+	2351	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.828305003177	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACCAAAAATAGATGC	NA	False	NA	11	True	AATAAA	-17	NA	72716771	72724899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72716835_72717207_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.22	chrX	+	3799	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	120.828305003177	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716771	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717138_72717271_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.23	chrX	+	3915	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	-4	intron_retention	FALSE	canonical	0	0	junction_7	124.767422519752	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716773	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723302_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.24	chrX	+	2635	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	2	intron_retention	FALSE	canonical	0	0	junction_11	162.628069191296	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACCAAAAATAGATGC	NA	False	NA	11	True	AATAAA	-17	NA	72716773	72724899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723602_72723663_72723737_72723841_72723937_72724030_72724110_72724282_72724565
ES.37142.25	chrX	+	4538	9	NIC	ENSMUSG00000019558.15	novel	2151	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	365	junction_5	41.2687457405722	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACCCACCAAAAATAGAT	NA	False	NA	9	True	AATAAA	-15	NA	72716773	72724897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722377_72722471_72722795_72723290_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.26	chrX	+	3840	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.828305003177	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716773	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717055_72717141_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.27	chrX	+	2720	13	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	-7	intron_retention	FALSE	canonical	1	1	junction_3	125.167526628204	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATCACAACCCACCA	NA	False	NA	0	True	AATAAA	-6	NA	72716773	72724888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720515_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.28	chrX	+	5469	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	360	junction_3	34.8970266517909	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716773	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937
ES.37142.29	chrX	+	3864	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.828305003177	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716773	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717161_72717227_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.3	chrX	+	5459	10	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-50	0	intron_retention	FALSE	canonical	1	4	junction_7	134.168587517881	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716705	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723602_72723663_72723737_72723841_72723937
ES.37142.30	chrX	+	3940	13	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	0	intron_retention	FALSE	canonical	1	1	junction_3	125.167526628204	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716773	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720515_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.32	chrX	+	6105	7	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	365	junction_5	32.6326353347211	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716773	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722377_72722471_72722795_72723290_72723663_72723737_72723841_72723937
ES.37142.33	chrX	+	4345	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_7	131.002491932642	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716773	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723531_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.34	chrX	+	5108	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	19	-4	intron_retention	FALSE	canonical	3	360	junction_3	44.3930602870865	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716774	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.35	chrX	+	4468	11	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	19	-4	intron_retention	FALSE	canonical	3	365	junction_7	43.7264222181509	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716774	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.36	chrX	+	4396	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	19	2	intron_retention	FALSE	canonical	3	365	junction_7	42.320062078416	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCACCAAAAATAGATGC	NA	False	NA	11	True	AATAAA	-17	NA	72716774	72724899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724282_72724565
ES.37142.37	chrX	+	3406	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	156.641908504717	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716774	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72716842_72717230_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.38	chrX	+	3838	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	20	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	125.626071029155	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716775	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722328_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.39	chrX	+	5254	10	NIC	ENSMUSG00000019558.15	novel	3964	13	NA	NA	20	-4	intron_retention	FALSE	canonical	3	360	junction_3	43.2206512139512	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716775	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723841_72723937_72724282_72724565
ES.37142.4	chrX	+	3800	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.828305003177	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716710	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717071_72717260_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.40	chrX	+	5557	9	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	20	-4	intron_retention	FALSE	canonical	3	360	junction_3	36.8060796608386	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716775	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722471_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937
ES.37142.41	chrX	+	5291	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	20	0	intron_retention	TRUE	canonical	1	2	junction_4	134.435536895	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716775	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72722377_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110
ES.37142.42	chrX	+	3923	13	FSM	ENSMUSG00000019558.15	ENSMUST00000168831.8	1919	13	-788	-1216	20	3	multi-exon	FALSE	canonical	1	9	junction_9	123.186398960636	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGTTTCTGCTTCTCT	NA	False	NA	33	True	AATAAA	-23	NA	72716775	72726111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723654_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.43	chrX	+	3751	14	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.828305003177	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716775	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717061_72717238_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.45	chrX	+	3918	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	21	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	125.428598546477	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716776	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720932_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.47	chrX	+	3917	13	NNC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	22	-4	intron_retention	FALSE	non_canonical	0	0	junction_5	124.11408282526	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72716777	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722477_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.48	chrX	+	5029	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	365	junction_6	41.6318372948301	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72717372	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72722377_72722471_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.49	chrX	+	3796	11	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	29	-4	intron_retention	FALSE	canonical	3	365	junction_7	44.300790060675	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72717419	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.5	chrX	+	3185	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-25	1	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCACCAAAAATAGATG	NA	False	NA	10	True	AATAAA	-16	NA	72716730	72724898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.50	chrX	+	4213	10	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	216	-4	intron_retention	FALSE	canonical	3	360	junction_2	47.8585879905001	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72719328	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72719376_72720255_72720506_72720926_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724282_72724565
ES.37142.51	chrX	+	5730	1	NIC	ENSMUSG00000019558.15	novel	3964	13	NA	NA	-73	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72720378	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72720400_72726100
ES.37142.52	chrX	+	3911	8	NIC	ENSMUSG00000019558.15	novel	2729	11	NA	NA	320	0	intron_retention	FALSE	canonical	3	365	junction_4	44.4228292109141	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72720984	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72722377_72722471_72722576_72722669_72722795_72723290_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.53	chrX	+	4467	2	FSM	ENSMUSG00000019558.15	ENSMUST00000170574.8	527	2	-1357	-2583	477	-4	multi-exon	FALSE	canonical	3	443	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72721141	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72722795_72723290
ES.37142.54	chrX	+	2575	6	NIC	ENSMUSG00000019558.15	novel	2729	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	365	junction_3	50.9140452134772	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72722487	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72722576_72722669_72722795_72723290_72723663_72723737_72723841_72723937_72724282_72724565
ES.37142.56	chrX	+	2335	2	ISM	ENSMUSG00000019558.15	ENSMUST00000114464.9	2729	11	3221	4	1174	-4	intron_retention	FALSE	canonical	3	432	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGCTCCTGTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	72723672	72726104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72723841_72723937
ES.37142.6	chrX	+	4066	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-23	0	intron_retention	FALSE	canonical	3	360	junction_3	46.937271309872	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716732	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.7	chrX	+	2770	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-652	1196	-17	15	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGCCTCTCCTCCCCAC	NA	False	NA	24	True	AATAAA	-30	NA	72716738	72724912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ES.37142.8	chrX	+	2812	12	NIC	ENSMUSG00000019558.15	novel	3314	13	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	360	junction_3	46.1617708814241	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATCACAACCCACCA	NA	False	NA	0	True	AATAAA	-6	NA	72716744	72724888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724282_72724565
ES.37142.9	chrX	+	4242	12	ISM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	-644	0	-9	0	intron_retention	FALSE	canonical	3	360	junction_3	36.3995277419187	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716746	72726108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110
ES.37143.1	chrX	+	3216	1	Intergenic	novelGene_30396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGAAGGAGGCAGCG	NA	False	NA	NA	False	NA	NA	NA	72739398	72742614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72739400_72742600
ES.37143.2	chrX	+	1176	1	Intergenic	novelGene_30395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTTATTGCTAGGCA	NA	False	NA	NA	False	NA	NA	NA	72739398	72740574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72739400_72740600
ES.37144.1	chrX	-	1560	3	Intergenic	novelGene_30393	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTGATGG	NA	False	NA	NA	False	NA	NA	NA	72716634	72714016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72715415_72716284_72716339_72716526
ES.37144.12	chrX	-	1549	2	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	27204	4	27204	-4	intron_retention	FALSE	canonical	3	2879	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTGTTTGTGTCTAAC	NA	False	NA	-17	True	AATAAA	-13	NA	72732577	72729787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72730202_72731442
ES.37144.13	chrX	-	1197	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1009.18722601054	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTGTTTGTGTCTAAC	NA	False	NA	-17	True	AATAAA	-13	NA	72759766	72729787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72730195_72731438_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ES.37144.14	chrX	-	1191	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	998.63788865287	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTGTTTGTGTCTAAC	NA	False	NA	-17	True	AATAAA	-13	NA	72759767	72729787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756142_72758398_72758535_72759723
ES.37144.15	chrX	-	1118	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	25	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1303.53967084603	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGGTGTTTGTGTCTAA	NA	False	NA	-18	True	AATAAA	-12	NA	72759756	72729788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72730202_72731608_72731639_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ES.37144.18	chrX	-	1048	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	-38	209	-38	-209	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGACCTGATTGTTGT	NA	False	NA	-7	True	NA	NA	NA	72759819	72729992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ES.37144.2	chrX	-	1704	1	Intergenic	novelGene_30394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTTGTCCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	72716631	72714927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72714900_72716600
ES.37144.3	chrX	-	1242	9	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	6	14856	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	956.827309392871	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTTGTCCAGGGAG	NA	False	NA	NA	False	NA	NA	NA	72759775	72714927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72714956_72729782_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ES.37144.4	chrX	-	2930	4	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	26601	-2262	26601	2262	3prime_fragment	FALSE	canonical	3	2622	junction_2	106.904942199445	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTACATATTTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	72733180	72727521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152
ES.37144.5	chrX	-	1261	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	-38	-4	-38	4	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTCTAACTGAGGCTT	NA	False	NA	-9	True	AATAAA	-21	NA	72759819	72729779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ES.37144.6	chrX	-	4392	4	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	22875	2	22875	-2	3prime_fragment	FALSE	canonical	3	2622	junction_2	106.904942199445	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTGTCTAACTG	NA	False	NA	-15	True	AATAAA	-15	NA	72736906	72729785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152
ES.37144.8	chrX	-	1326	8	NNC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	60	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1022.57462179679	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTGTTTGTGTCTAAC	NA	False	NA	-17	True	AATAAA	-13	NA	72759721	72729787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759552
ES.37145.1	chrX	+	3664	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	-16	0	-16	0	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCCTGAACTTGGT	NA	False	NA	18	True	AGTAAA	-19	NA	72760186	72782140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
ES.37145.2	chrX	+	3500	3	NNC	ENSMUSG00000031378.15	novel	3648	10	NA	NA	0	-7933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACCCCTGCCATTTCCT	NA	False	NA	NA	False	NA	NA	NA	72760202	72767105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72761537_72764519_72765702_72766121
ES.37145.4	chrX	+	2891	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	373	384	230	-384	multi-exon	FALSE	canonical	3	38	junction_7	8.3901765016235	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTACAACCTAATTTAT	NA	False	NA	NA	False	AATATA	-23	NA	72760575	72781756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
ES.37145.5	chrX	+	2674	10	NNC	ENSMUSG00000031378.15	novel	3648	10	NA	NA	230	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.0561224405474	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCCTGCCTCCTGAACT	NA	False	NA	14	True	AGTAAA	-15	NA	72760575	72782136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72760940_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
ES.37145.6	chrX	+	4223	5	NIC	ENSMUSG00000031378.15	novel	3648	10	NA	NA	13825	-9	intron_retention	FALSE	canonical	3	50	junction_2	7.08431365765238	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACAATCCTGCCTCCT	NA	False	NA	9	True	AGTAAA	-10	NA	72774170	72782131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72774495_72777614_72777761_72778067_72780481_72780708_72780835_72780917
ES.37146.1	chrX	-	177	1	Intergenic	novelGene_30397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72779226	72779049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72779000_72779200
ES.37147.1	chrX	-	173	1	Intergenic	novelGene_30398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	72783325	72783152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72783200_72783300
ES.37148.1	chrX	+	220	1	Intergenic	novelGene_30399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAAGAGGTGTACTGA	NA	False	NA	NA	False	NA	NA	NA	72791917	72792137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72791900_72792100
ES.37148.2	chrX	+	390	1	Intergenic	novelGene_30400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGACAAAATAAAAAC	NA	False	NA	NA	False	NA	NA	NA	72791917	72792307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72791900_72792300
ES.37149.1	chrX	+	3838	25	NNC	ENSMUSG00000031385.15	novel	6030	35	NA	NA	-2291	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.42339090437823	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACAATCTCAATCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	72806845	72816107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72806884_72806965_72807083_72807388_72807483_72807967_72808120_72808872_72808979_72809610_72809742_72809964_72810142_72810242_72810439_72810546_72810787_72810896_72811059_72811126_72811279_72811386_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814587_72814849_72815016_72815082_72815148_72815225_72815351_72815427_72815751
ES.37149.2	chrX	+	2358	15	ISM	ENSMUSG00000031385.15	ENSMUST00000002079.7	6030	35	10377	12	1945	-12	3prime_fragment	FALSE	canonical	0	0	junction_1	1.4638501094228	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATCTCAATCTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	72811081	72816108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72811279_72811386_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814700_72814849_72815016_72815082_72815148_72815225_72815351_72815427_72815751
ES.37149.3	chrX	+	2889	12	NIC	ENSMUSG00000031385.15	novel	5030	31	NA	NA	1982	-4	intron_retention	FALSE	canonical	0	0	junction_10	1.52662323852242	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATCTGAAGCCCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	72811118	72816116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814700_72814849_72815016_72815082_72815148
ES.3715.1	chr10	+	2993	22	NNC	ENSMUSG00000019907.11	novel	4212	15	NA	NA	-434	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.7737240369269	504	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGCCTCAGATATTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	107997619	108113437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107997802_108066370_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.10	chr10	+	5334	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-101	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTTTTAATGAAAACAG	NA	False	NA	15	True	AATAAA	-25	NA	107997952	108115260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.17	chr10	+	5860	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-93	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTTTTTCCTTAGC	NA	False	NA	NA	False	CATAAA	-25	NA	107997960	108115626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.18	chr10	+	5487	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-93	-616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.630003210372	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	107997960	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034669_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.2	chr10	+	5250	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-414	-1150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	54.0733940775863	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTGTGTTCTACTGCC	NA	False	NA	14	True	ATTAAA	-29	NA	107997639	108114695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.20	chr10	+	2489	16	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-93	16412	-93	7463	5prime_fragment	FALSE	canonical	3	168	junction_12	22.3352238005851	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGCAGGATAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	107997960	108096800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
ES.3715.21	chr10	+	4758	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-90	-1150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTGTGTTCTACTGCC	NA	False	NA	14	True	ATTAAA	-29	NA	107997963	108114695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.24	chr10	+	3161	18	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-86	14632	-86	-6637	5prime_fragment	FALSE	canonical	3	168	junction_12	28.0333464308264	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCGTGTTGTACATTAAT	NA	False	NA	NA	False	AATAGA	-18	NA	107997967	108098580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170
ES.3715.26	chr10	+	6371	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-84	-592	intron_retention	FALSE	non_canonical	0	0	junction_18	55.2341559496574	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGAACTTTTAATG	NA	False	NA	8	True	AATAAA	-44	NA	107997969	108115253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.27	chr10	+	3614	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	70.0855539831616	504	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATATGCCTCAGATATT	NA	False	NA	NA	False	AATAAA	-15	NA	107997978	108113434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088653_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.29	chr10	+	6529	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-72	-341	intron_retention	FALSE	non_canonical	0	0	junction_18	53.9369849649333	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGAGAGCTAGTTTTT	NA	False	NA	4	True	CATAAA	-15	NA	107997981	108115504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.3	chr10	+	5831	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-413	-568	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTAAATCTTGTTCTGA	NA	False	NA	32	True	AATAAA	-42	NA	107997640	108115277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.30	chr10	+	6838	21	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-71	-229	intron_retention	FALSE	non_canonical	0	0	junction_14	71.2961955506744	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTAAACTTCTGGTTT	NA	False	NA	NA	False	CATAAA	-15	NA	107997982	108115616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108096696_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.31	chr10	+	4235	16	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	-71	14644	-71	-6649	intron_retention	FALSE	canonical	3	168	junction_12	22.3352238005851	459	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAATGCTTTCCGTG	NA	False	NA	NA	False	AATAGA	-6	NA	107997982	108098568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
ES.3715.32	chr10	+	4807	18	NIC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	-69	-2535	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	54.2186397805587	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107997984	108102682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563
ES.3715.33	chr10	+	5883	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGCACTTTGTGTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	107997988	108115845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.34	chr10	+	5389	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-64	-616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	89.9010588261998	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	107997989	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108111618_108111742_108113067
ES.3715.4	chr10	+	6143	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-156	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGCACTTTGTGTATT	NA	False	NA	NA	False	AGTAAA	-20	NA	107997897	108115846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.41	chr10	+	10273	22	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-50	1185	intron_retention	FALSE	non_canonical	0	0	junction_17	56.4963828031607	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGCTGACTGTATTA	NA	False	NA	-60	True	AATAAA	-17	NA	107998003	108114621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563_108100643_108100693_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.45	chr10	+	4471	14	NIC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	0	7444	intron_retention	FALSE	canonical	3	168	junction_10	23.7150240747064	445	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAAAGAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	107998053	108096781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
ES.3715.46	chr10	+	6467	22	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	4	-616	intron_retention	FALSE	non_canonical	0	0	junction_17	53.5024105672626	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	107998057	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.48	chr10	+	5625	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	6	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.6472221374205	522	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGAGAGCTAGTTTTT	NA	False	NA	4	True	CATAAA	-15	NA	107998059	108115504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998487_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070002_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.5	chr10	+	5740	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-141	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTTTTTCCTTAGC	NA	False	NA	NA	False	CATAAA	-25	NA	107997912	108115626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.51	chr10	+	4636	18	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	17	13054	17	-5059	5prime_fragment	FALSE	canonical	3	168	junction_12	28.0333464308264	461	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGATAGATAGATAGATA	NA	False	NA	NA	False	NA	NA	NA	107998070	108100158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170
ES.3715.52	chr10	+	5453	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	27	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	67.5706547876351	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAGCTAGTTTTTTTA	NA	False	NA	7	True	CATAAA	-18	NA	107998080	108115507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.53	chr10	+	6493	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	46	-340	intron_retention	FALSE	non_canonical	0	0	junction_18	55.2341559496574	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGAGCTAGTTTTTT	NA	False	NA	5	True	CATAAA	-16	NA	107998099	108115505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.55	chr10	+	4720	19	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	186	10530	-21	-2535	5prime_fragment	FALSE	canonical	3	168	junction_12	28.3274503696405	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107998239	108102682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563
ES.3715.56	chr10	+	5906	22	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-18	-616	intron_retention	FALSE	non_canonical	0	0	junction_17	69.050804524221	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	107998242	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.57	chr10	+	5597	18	NIC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	-7	-2537	intron_retention	FALSE	canonical	3	168	junction_12	29.1444321247718	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107998253	108102680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563
ES.3715.58	chr10	+	5064	23	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-6	-616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	71.6751164215977	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	107998254	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108107582_108107631_108109998_108110050_108113067
ES.3715.59	chr10	+	5547	19	NNC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	-2	-2535	intron_retention	FALSE	non_canonical	0	0	junction_18	60.3972701942197	472	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107998258	108102682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108098293_108100563_108100643_108100689
ES.3715.6	chr10	+	5791	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-141	-336	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	522	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCTAGTTTTTTTATG	NA	False	NA	9	True	CATAAA	-20	NA	107997912	108115509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.63	chr10	+	3772	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	3	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAGTGCTTTAACGTCC	NA	False	NA	NA	False	NA	NA	NA	107998263	108113841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.65	chr10	+	177	1	Intergenic	novelGene_2825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	108031069	108031246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_108031100_108031200
ES.3715.66	chr10	+	1431	1	Intergenic	novelGene_2826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAAAAAAACTC	NA	False	NA	NA	False	NA	NA	NA	108046399	108047830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_108046400_108047800
ES.3715.67	chr10	+	5375	15	NIC	ENSMUSG00000019907.11	novel	3355	25	NA	NA	-35121	-2507	intron_retention	FALSE	canonical	3	168	junction_10	25.1047804212664	432	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTACAATCCCAATTAT	NA	False	NA	NA	False	NA	NA	NA	108050333	108102710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108098293_108100563
ES.3715.69	chr10	+	3754	19	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-19120	-1162	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	78.1555113259281	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTTTAAAAGGTCATTG	NA	False	NA	2	True	ATTAAA	-17	NA	108066334	108114683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.7	chr10	+	3695	24	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-101	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	54.0733940775863	504	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCCGTAAGCCTTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	107997952	108113453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.72	chr10	+	6877	15	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-9205	-338	intron_retention	FALSE	non_canonical	0	0	junction_10	63.1445135529345	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAGCTAGTTTTTTTA	NA	False	NA	7	True	CATAAA	-18	NA	108076249	108115507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108088786_108089185_108089357_108095616_108095708_108096696_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.73	chr10	+	2049	8	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	87313	15034	-88	-7039	intron_retention	FALSE	canonical	3	168	junction_3	39.2022489983752	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGGAGAAAGA	NA	False	NA	NA	False	CATAAA	-12	NA	108085366	108098178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105
ES.3715.74	chr10	+	3950	13	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-82	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	88.2159597553388	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTTTTTCCTTAGC	NA	False	NA	NA	False	CATAAA	-25	NA	108085372	108115626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.75	chr10	+	7682	6	ISM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	87654	10531	230	-2536	intron_retention	FALSE	canonical	3	168	junction_2	31.7779797973377	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108085707	108102681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696
ES.3715.76	chr10	+	3792	13	NNC	ENSMUSG00000019907.11	novel	4212	15	NA	NA	1320	-338	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	94.0096035283394	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAGCTAGTTTTTTTA	NA	False	NA	7	True	CATAAA	-18	NA	108086797	108115507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108086870_108087700_108087806_108088617_108088786_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.77	chr10	+	8490	3	ISM	ENSMUSG00000019907.11	ENSMUST00000218161.2	5066	11	-1999	13135	-1261	-2507	intron_retention	FALSE	canonical	3	247	junction_2	6.5	428	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTACAATCCCAATTAT	NA	False	NA	NA	False	NA	NA	NA	108086971	108102710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108089357_108095616_108095708_108096696
ES.3715.78	chr10	+	3892	13	NNC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-536	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	73.3622575534132	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGAGAGCTAGTTTTT	NA	False	NA	4	True	CATAAA	-15	NA	108087696	108115504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.80	chr10	+	3357	9	NNC	ENSMUSG00000019907.11	novel	4212	15	NA	NA	-6264	-340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	86.2843228808107	478	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGAGCTAGTTTTTT	NA	False	NA	5	True	CATAAA	-16	NA	108096693	108115505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.81	chr10	+	3155	8	NNC	ENSMUSG00000019907.11	novel	4212	15	NA	NA	-5854	-340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.5484109276432	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGAGCTAGTTTTTT	NA	False	NA	5	True	CATAAA	-16	NA	108097103	108115505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108097278_108098170_108098293_108100563_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.83	chr10	+	4032	6	NNC	ENSMUSG00000019907.11	novel	5066	11	NA	NA	-4451	1185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.6087862071264	465	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGCTGACTGTATTA	NA	False	NA	-60	True	AATAAA	-17	NA	108098506	108114621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.84	chr10	+	10397	5	NNC	ENSMUSG00000019907.11	novel	541	5	NA	NA	-4057	1185	intron_retention	FALSE	non_canonical	0	0	junction_1	103.945598752424	460	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGCTGACTGTATTA	NA	False	NA	-60	True	AATAAA	-17	NA	108098900	108114621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108100643_108100689_108104569_108105114_108105220_108107582_108107631_108109998
ES.3715.85	chr10	+	4263	6	NNC	ENSMUSG00000019907.11	novel	5066	11	NA	NA	-4056	-598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.6087862071264	468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAATGTGTGAACTT	NA	False	NA	2	True	AATAAA	-38	NA	108098901	108115247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108100630_108104417_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.86	chr10	+	4437	5	NIC	ENSMUSG00000019907.11	novel	5066	11	NA	NA	-440	-596	intron_retention	FALSE	canonical	3	227	junction_3	9.87420882906575	467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTGTGAACTTTT	NA	False	NA	4	True	AATAAA	-40	NA	108102517	108115249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.87	chr10	+	2566	5	NIC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-382	0	intron_retention	FALSE	canonical	3	227	junction_3	9.87420882906575	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATGCCTCAGATATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	108102575	108113436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.88	chr10	+	3294	6	ISM	ENSMUSG00000019907.11	ENSMUST00000218161.2	5066	11	13795	340	-192	-340	3prime_fragment	FALSE	canonical	3	227	junction_4	17.2348484182484	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGAGCTAGTTTTTT	NA	False	NA	5	True	CATAAA	-16	NA	108102765	108115505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ES.3715.89	chr10	+	1888	6	NNC	ENSMUSG00000019907.11	novel	5066	11	NA	NA	86	-616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.6087862071264	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	108104516	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067_108114270_108114799
ES.3715.90	chr10	+	2651	3	ISM	ENSMUSG00000019907.11	ENSMUST00000218161.2	5066	11	18609	229	3149	-229	3prime_fragment	FALSE	canonical	3	227	junction_1	4	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTAAACTTCTGGTTT	NA	False	NA	NA	False	CATAAA	-15	NA	108107579	108115616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108107631_108109998_108110050_108113067
ES.3715.91	chr10	+	2264	3	ISM	ENSMUSG00000019907.11	ENSMUST00000218161.2	5066	11	18609	616	3149	-616	3prime_fragment	FALSE	canonical	3	227	junction_1	4	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGAATAAAACTA	NA	False	NA	-16	True	AATAAA	-20	NA	108107579	108115229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108107631_108109998_108110050_108113067
ES.37150.1	chrX	+	3092	11	NIC	ENSMUSG00000002007.6	novel	1981	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	0.66332495807108	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	False	NA	NA	False	AATAAA	-14	NA	72818012	72822531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72818113_72818189_72818321_72818498_72818608_72818709_72818798_72819083_72819733_72819803_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821953_72822109
ES.37150.2	chrX	+	2383	13	NNC	ENSMUSG00000002007.6	novel	1981	15	NA	NA	37	-4	intron_retention	FALSE	canonical	0	0	junction_1	0.640095478989051	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCAGTGTCTTGGAG	NA	False	NA	NA	False	AATAAA	-10	NA	72818047	72822527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72818113_72818189_72818321_72818498_72818608_72818709_72818798_72819083_72819733_72819803_72819985_72820575_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ES.37151.1	chrX	+	1007	10	Antisense	novelGene_ENSMUSG00000002010.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCGACAGTTGGGGACAGC	NA	False	NA	NA	False	AAAACA	-14	NA	72823267	72830507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_72823318_72823584_72823732_72823820_72823921_72824178_72824314_72824503_72824637_72824757_72824818_72825281_72825401_72825615_72825710_72826280_72826325_72830382
ES.37152.1	chrX	+	971	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-84	4	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	599.594863220158	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATTCAAGACACGGGG	5348	False	NA	37	True	AATAAA	-19	NA	72830549	72834421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ES.37152.10	chrX	+	7610	1	Genic_Genomic	ENSMUSG00000002014.13	novel	NA	NA	NA	NA	-17	3790	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCGTGCTCGGATCAGG	5415	False	NA	NA	False	NA	NA	NA	72830616	72838226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_72830600_72838200
ES.37152.11	chrX	+	2729	3	FSM	ENSMUSG00000002014.13	ENSMUST00000141721.2	2568	3	-172	11	-16	4	multi-exon	FALSE	canonical	3	1319	junction_2	168.5	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATTCAAGACACGGGG	5416	False	NA	37	True	AATAAA	-19	NA	72830617	72834421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72832560_72833405_72834031_72834259
ES.37152.13	chrX	+	2163	3	NNC	ENSMUSG00000002014.13	novel	522	3	NA	NA	-7	4	intron_retention	FALSE	canonical	3	147	junction_2	139.5	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATTCAAGACACGGGG	5425	False	NA	37	True	AATAAA	-19	NA	72830626	72834421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832660
ES.37152.14	chrX	+	944	5	NIC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	426	junction_1	475.325677825215	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAGTACATTCAAGACA	5427	False	NA	32	True	AATAAA	-14	NA	72830628	72834416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72830913_72832443_72832560_72833405_72833727_72833964_72834031_72834259
ES.37152.15	chrX	+	1128	6	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	147	junction_2	616.054218393154	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACACGGGGCTCCTGT	5427	False	NA	44	True	AATAAA	-26	NA	72830628	72834428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964
ES.37152.16	chrX	+	3544	3	NNC	ENSMUSG00000002014.13	novel	747	4	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	147	junction_1	688	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACACGGGGCTCCTGTG	5427	False	NA	45	True	AATAAA	-27	NA	72830628	72834429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72832560_72832660_72833481_72833636
ES.37152.17	chrX	+	1425	3	FSM	ENSMUSG00000002014.13	ENSMUST00000142829.2	522	3	-242	-661	-5	0	multi-exon	FALSE	canonical	3	426	junction_1	615	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5427	False	NA	46	True	AATAAA	-28	NA	72830628	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72830913_72832443_72832560_72833405
ES.37152.2	chrX	+	917	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-55	4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	619.843730306276	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATTCAAGACACGGGG	5377	False	NA	37	True	AATAAA	-19	NA	72830578	72834421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832685_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ES.37152.20	chrX	+	2124	3	NNC	ENSMUSG00000002014.13	novel	522	3	NA	NA	7	4	intron_retention	FALSE	canonical	3	48	junction_2	189	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATTCAAGACACGGGG	5439	False	NA	37	True	AATAAA	-19	NA	72830640	72834421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832685
ES.37152.22	chrX	+	3458	3	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	9	0	intron_retention	FALSE	canonical	3	147	junction_1	586	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5441	False	NA	46	True	AATAAA	-28	NA	72830642	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72832560_72832660_72834031_72834259
ES.37152.23	chrX	+	2944	2	ISM	ENSMUSG00000002014.13	ENSMUST00000141721.2	2568	3	-147	0	9	0	intron_retention	FALSE	canonical	3	1656	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5441	False	NA	48	True	AATAAA	-30	NA	72830642	72834432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72832560_72833405
ES.37152.24	chrX	+	2542	4	FSM	ENSMUSG00000002014.13	ENSMUST00000129239.2	747	4	-1801	6	15	0	multi-exon	FALSE	canonical	3	1491	junction_3	71.4438396380137	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5447	False	NA	46	True	AATAAA	-28	NA	72830648	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72832560_72833405_72833481_72833636_72833727_72833964
ES.37152.25	chrX	+	2286	5	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	16	2254	intron_retention	FALSE	canonical	0	0	junction_4	511.842260857776	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTATCTAGCCCCTGC	5448	False	NA	NA	False	AATAAA	-11	NA	72830649	72836690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832660_72834031_72834259_72834630_72836523
ES.37152.26	chrX	+	658	5	NIC	ENSMUSG00000002014.13	novel	800	6	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	100	junction_3	582.767964116079	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGAGTACATTCAAGAC	5469	False	NA	31	True	AATAAA	-13	NA	72830670	72834415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72830913_72832440_72832560_72833405_72833481_72833964_72834031_72834259
ES.37152.27	chrX	+	2198	2	FSM	ENSMUSG00000002014.13	ENSMUST00000136544.2	383	2	-83	-1732	37	0	multi-exon	FALSE	canonical	3	1181	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5503	False	NA	46	True	AATAAA	-28	NA	72830704	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72830913_72832440
ES.37152.28	chrX	+	2954	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	113	-2267	-41	2261	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGCCCCTGCTTTCCCA	5545	False	NA	NA	False	AATAAA	-18	NA	72830746	72836697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ES.37152.29	chrX	+	3676	1	NIC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-41	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTCAAGACACGGGGC	5545	False	NA	38	True	AATAAA	-20	NA	72830746	72834422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72830700_72834400
ES.37152.3	chrX	+	1078	5	ISM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	-86	2	-52	0	intron_retention	FALSE	canonical	3	426	junction_1	493.487081897794	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5380	False	NA	46	True	AATAAA	-28	NA	72830581	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964
ES.37152.30	chrX	+	1204	5	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	147	junction_2	554.862370322587	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAGTACATTCAAGACA	5577	False	NA	32	True	AATAAA	-14	NA	72830778	72834416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832443_72832560_72832660_72832760_72833405_72833481_72833636
ES.37152.31	chrX	+	3440	2	NIC	ENSMUSG00000002014.13	novel	747	4	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1523	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACACGGGGCTCCTGT	5631	False	NA	44	True	AATAAA	-26	NA	72830832	72834428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72833481_72833636
ES.37152.32	chrX	+	2360	5	NNC	ENSMUSG00000002014.13	novel	2119	5	NA	NA	43	-3	intron_retention	FALSE	canonical	3	147	junction_1	662.822138661647	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATGAGTACATTCAAGA	5712	False	NA	30	True	AATAAA	-12	NA	72830913	72834414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964
ES.37152.33	chrX	+	8104	1	Genic_Genomic	ENSMUSG00000085669.2_ENSMUSG00000002014.13	novel	NA	NA	NA	NA	669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGTCTTTGCCTTC	7917	False	NA	NA	False	NA	NA	NA	72833118	72841222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_72833100_72841200
ES.37152.34	chrX	+	4326	1	Genic_Genomic	ENSMUSG00000085669.2	novel	NA	NA	NA	NA	1670	3594	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAGAACGAG	NA	False	NA	NA	False	NA	NA	NA	72840490	72844816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_72840500_72844800
ES.37152.4	chrX	+	852	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	-52	0	-52	0	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5380	False	NA	46	True	AATAAA	-28	NA	72830581	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ES.37152.5	chrX	+	1231	4	NIC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-37	0	intron_retention	FALSE	canonical	3	1181	junction_1	199.50995519578	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5395	False	NA	46	True	AATAAA	-28	NA	72830596	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_72830913_72832440_72832560_72833405_72834031_72834259
ES.37152.7	chrX	+	2345	5	FSM	ENSMUSG00000002014.13	ENSMUST00000130738.8	2119	5	-213	-13	-17	0	multi-exon	FALSE	canonical	3	1319	junction_4	120.079921302439	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5415	False	NA	46	True	AATAAA	-28	NA	72830616	72834430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ES.37152.8	chrX	+	3069	3	NNC	ENSMUSG00000002014.13	novel	2568	3	NA	NA	-17	0	intron_retention	FALSE	canonical	3	147	junction_1	35.5	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5415	False	NA	48	True	AATAAA	-30	NA	72830616	72834432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72832560_72832660_72832760_72833405
ES.37152.9	chrX	+	1106	6	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	48	junction_2	633.576325315269	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAGTACATTCAAGACA	5415	False	NA	32	True	AATAAA	-14	NA	72830616	72834416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_72830913_72832440_72832560_72832685_72832760_72833405_72833481_72833636_72833727_72833964
ES.37153.10	chrX	-	2362	9	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	10	-2	intron_retention	FALSE	canonical	3	1120	junction_7	122.29312889529	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830493	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72826323_72830380
ES.37153.11	chrX	-	1283	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	523.595831764656	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830471	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824631_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ES.37153.12	chrX	-	1997	6	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	34	-2	intron_retention	FALSE	canonical	3	1120	junction_5	127.540424964009	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72825791	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823922_72824179_72824637_72824757_72824819_72825282
ES.37153.13	chrX	-	1778	10	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	1072	junction_8	153.432898431163	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830506	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.16	chrX	-	1796	10	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_5	449.758810535515	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830513	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824746_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.17	chrX	-	1588	11	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	428.479824495857	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830502	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ES.37153.18	chrX	-	3052	6	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	2	211	junction_4	473.636400628161	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830513	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823730_72823818_72823922_72824179_72824637_72824757_72825916_72826280_72826323_72830380
ES.37153.19	chrX	-	1545	11	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	20	-2	intron_retention	FALSE	canonical	0	0	junction_4	612.419006889891	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830208	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824175_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830133
ES.37153.2	chrX	-	1515	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-194	2	combination_of_known_junctions	TRUE	canonical	3	1072	junction_10	144.485579365652	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGTTCTTCCCTTAC	NA	False	NA	-26	True	AATAAA	-21	NA	72830697	72822566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.20	chrX	-	2297	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	21	-2	intron_retention	FALSE	canonical	3	210	junction_8	411.788401366527	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830207	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830133
ES.37153.21	chrX	-	1316	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	536.384884016741	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830471	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823949_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ES.37153.22	chrX	-	4136	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_11	407.113747379998	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830228	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72827286
ES.37153.23	chrX	-	2565	8	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	1120	junction_6	118.975044545021	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830506	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72826323_72830380
ES.37153.24	chrX	-	4570	10	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	24	-2	intron_retention	FALSE	canonical	1	18	junction_9	448.875164806705	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830204	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72827286
ES.37153.25	chrX	-	3324	6	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	1264	junction_5	72.1886417658623	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830508	72822571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72826323_72830380
ES.37153.26	chrX	-	6141	9	ISM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	-6	3	-6	-3	intron_retention	FALSE	canonical	3	1120	junction_7	118.465976128169	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830509	72822571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611
ES.37153.27	chrX	-	1285	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	581.469583067814	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830227	72822571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824631_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830133
ES.37153.28	chrX	-	4829	9	NNC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	21	-3	intron_retention	FALSE	canonical	0	0	junction_8	478.874983685721	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGCCCTGTTCTTCC	NA	False	NA	-31	True	AATAAA	-16	NA	72830207	72822571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72827600
ES.37153.29	chrX	-	2652	8	NNC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-3	-4	intron_retention	FALSE	canonical	0	0	junction_4	498.668062677663	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830506	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824746_72824819_72825282_72825396_72825611_72826323_72830380
ES.37153.3	chrX	-	1163	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	411.114248865002	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830463	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823696_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.30	chrX	-	2852	7	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	1120	junction_5	123.731452033112	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830501	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72826323_72830380
ES.37153.31	chrX	-	1918	11	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	24	-4	intron_retention	FALSE	canonical	2	18	junction_6	524.901743186284	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830204	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824419_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830133
ES.37153.32	chrX	-	2623	9	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	1214	junction_5	100.288022714579	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830508	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72825396_72825611_72826323_72830380
ES.37153.33	chrX	-	4871	10	NNC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	24	-4	intron_retention	FALSE	canonical	1	18	junction_9	446.854382887952	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830204	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72827286
ES.37153.35	chrX	-	1302	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	32	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	542.1811322476	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830471	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826338_72830380
ES.37153.36	chrX	-	7838	4	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-204	-4	intron_retention	FALSE	canonical	3	1404	junction_3	27.0678160675491	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830707	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823133_72823219_72823730_72823818_72824637_72824757
ES.37153.38	chrX	-	3544	5	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	32	-4	intron_retention	FALSE	canonical	3	1264	junction_4	80.1479101411883	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830471	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823133_72823219_72823730_72823818_72824637_72824757_72826323_72830380
ES.37153.39	chrX	-	1305	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	411.9644331916	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830506	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830393
ES.37153.4	chrX	-	1283	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	504.639352441977	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830218	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830133
ES.37153.40	chrX	-	2389	9	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	7	-4	intron_retention	FALSE	canonical	3	1120	junction_7	116.685943347946	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830496	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72826323_72830380
ES.37153.41	chrX	-	1279	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	58	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	534.663716046075	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830445	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822796_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ES.37153.42	chrX	-	1299	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	412.124890803546	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830513	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824529_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.43	chrX	-	1322	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	408.296987194452	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	False	NA	-32	True	AATAAA	-15	NA	72830499	72822572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824746_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ES.37153.44	chrX	-	1325	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	542.1811322476	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTTGGCCCTGTTCTT	NA	False	NA	-33	True	AATAAA	-14	NA	72830513	72822573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826313_72830373
ES.37153.46	chrX	-	3776	12	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	43	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	411.9644331916	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTTGGCCCTGTTCTT	NA	False	NA	-33	True	AATAAA	-14	NA	72830185	72822573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72827600
ES.37153.5	chrX	-	2351	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830508	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ES.37153.6	chrX	-	2098	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	-20	2	-20	-2	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830523	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ES.37153.7	chrX	-	1956	9	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	39	-2	intron_retention	FALSE	canonical	0	0	junction_7	465.681204661515	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830464	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825710_72826276_72826323_72830380
ES.37153.8	chrX	-	1898	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1120	junction_8	123.424632873669	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830513	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ES.37153.9	chrX	-	1500	11	NNC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_9	429.183131075768	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGCCCTGTTCTTCCC	NA	False	NA	-30	True	AATAAA	-17	NA	72830492	72822570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826276_72826323_72830380
ES.37154.1	chrX	-	3937	8	NNC	ENSMUSG00000002006.13	novel	3970	8	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.0690449676497	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACTTGTGTTCATTGC	NA	False	NA	-4	True	AATAAA	-24	NA	72868558	72836962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842363_72842455_72843457_72843694_72867887
ES.37154.2	chrX	-	3098	6	NNC	ENSMUSG00000002006.13	novel	3625	6	NA	NA	26350	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.01980390271856	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACTTGTGTTCATTGC	NA	False	NA	-4	True	AATAAA	-24	NA	72842225	72836962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842066
ES.37154.3	chrX	-	4058	8	FSM	ENSMUSG00000002006.13	ENSMUST00000002080.12	3970	8	-87	-1	-87	1	multi-exon	FALSE	canonical	1	1	junction_1	0.699854212223765	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACTTGTGTTCATTG	NA	False	NA	-5	True	AATAAA	-23	NA	72868662	72836963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842363_72842455_72843439_72843694_72867887
ES.37154.4	chrX	-	3820	7	NNC	ENSMUSG00000002006.13	novel	3970	8	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.10554159678513	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGACTTGTGTTCATT	NA	False	NA	-6	True	AATAAA	-22	NA	72868542	72836964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72842363_72842455_72843457_72843694_72867887
ES.37154.5	chrX	-	3178	8	FSM	ENSMUSG00000002006.13	ENSMUST00000002080.12	3970	8	23	769	23	-769	multi-exon	FALSE	canonical	1	1	junction_1	0.699854212223765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGGTATTCTTGCT	NA	False	NA	NA	False	CATAAA	-17	NA	72868552	72837733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842363_72842455_72843439_72843694_72867887
ES.37155.1	chrX	-	158	1	Intergenic	novelGene_30401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	72877835	72877677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72877700_72877800
ES.37156.1	chrX	+	171	1	Intergenic	novelGene_30402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	72896632	72896803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72896600_72896800
ES.37157.1	chrX	-	5245	27	NIC	ENSMUSG00000031391.19	novel	5113	29	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1.70276489393682	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACCATTCCTTCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	72924424	72897385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72898873_72899364_72899438_72899748_72899887_72900237_72900400_72900508_72900629_72900773_72900948_72901026_72901150_72901243_72901446_72901647_72901764_72902908_72903132_72903307_72903379_72903624_72903823_72904044_72904156_72904325_72904451_72904653_72904811_72904911_72905079_72905187_72905300_72905883_72906028_72906165_72906298_72906453_72906639_72906762_72906875_72907764_72907936_72908029_72908153_72909222_72909423_72909660_72909767_72913334_72913523_72924299
ES.37158.1	chrX	+	477	1	Intergenic	novelGene_30403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAGAGAGCGCG	NA	False	NA	NA	False	NA	NA	NA	72970121	72970598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_72970100_72970600
ES.37159.1	chrX	-	3212	20	NNC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	-1119	8	intron_retention	FALSE	canonical	0	0	junction_8	14.4561616419533	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTCTATGGGTGTGCG	NA	False	NA	NA	False	AATACA	-36	NA	72950381	72937949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940622_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941512_72941574_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274
ES.37159.10	chrX	-	3422	20	NIC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	15	-8	intron_retention	FALSE	canonical	3	19	junction_16	9.87988807455079	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACAGATTCCTGAACA	NA	False	NA	NA	False	AATACA	-14	NA	72954862	72937971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.101	chrX	-	5090	9	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-2	-638	intron_retention	FALSE	non_canonical	0	0	junction_1	890.821802817488	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974349	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72970305_72971229_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973718_72973792_72973869_72974013_72974124_72974319
ES.37159.102	chrX	-	5276	5	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-3	-638	intron_retention	FALSE	canonical	3	225	junction_3	830.533111922698	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974401	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72969954_72971418_72971967_72972721_72973687_72974013_72974124_72974319
ES.37159.103	chrX	-	5187	5	ISM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	-21	656	4	-638	intron_retention	FALSE	canonical	3	1962	junction_2	107.047594554946	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974419	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286
ES.37159.104	chrX	-	6061	3	NNC	ENSMUSG00000031387.15	novel	514	4	NA	NA	-10	-638	intron_retention	TRUE	non_canonical	0	0	junction_1	1021	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974408	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72970287_72972055_72974124_72974319
ES.37159.105	chrX	-	4969	5	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-16	-638	intron_retention	FALSE	canonical	2	40	junction_1	907.529062895509	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974378	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72969954_72971884_72971967_72972721_72973869_72974013_72974124_72974319
ES.37159.106	chrX	-	5553	4	ISM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	11	656	11	-638	intron_retention	FALSE	canonical	3	1962	junction_2	123.582630926302	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGATAAGGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	72974445	72966382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721
ES.37159.107	chrX	-	5293	5	ISM	ENSMUSG00000031387.15	ENSMUST00000135711.8	2125	7	16	680	-9	-664	5prime_fragment	FALSE	canonical	3	1962	junction_2	110.664752744494	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72974407	72966408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721_72974124_72974319
ES.37159.108	chrX	-	4380	4	ISM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	-10	1792	-10	1350	intron_retention	FALSE	canonical	3	1962	junction_2	123.582630926302	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAATAAA	NA	False	NA	NA	False	NA	NA	NA	72974408	72967518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721
ES.37159.11	chrX	-	3180	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	2	171	2	9	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCCTGTGCTGTTTGGG	NA	False	NA	NA	False	CATAAA	-26	NA	72954934	72938128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.12	chrX	-	3215	21	FSM	ENSMUSG00000031389.18	ENSMUST00000145159.8	3208	21	2	-9	2	9	multi-exon	FALSE	canonical	3	19	junction_17	9.50513019374274	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCCTGTGCTGTTTGGG	NA	False	NA	NA	False	CATAAA	-26	NA	72954875	72938128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.13	chrX	-	3339	22	NNC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-9	1	intron_retention	FALSE	canonical	0	0	junction_16	13.6866454267855	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTAATAGCCTGTGC	NA	False	NA	NA	False	CATAAA	-18	NA	72954913	72938136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.14	chrX	-	3730	27	Fusion	ENSMUSG00000031389.18_ENSMUSG00000031388.15	novel	3208	21	NA	NA	8	0	intron_retention	FALSE	canonical	2	2	junction_20	446.638862694055	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72965542	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.15	chrX	-	3110	21	NNC	ENSMUSG00000031389.18	novel	3051	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	13.7363568678162	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954916	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943810_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72950034_72950198_72950274_72950483_72954768
ES.37159.16	chrX	-	3062	21	NNC	ENSMUSG00000031389.18	novel	3051	21	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	13.9838299474786	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954886	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72950034_72950198_72950274_72950485_72954768
ES.37159.17	chrX	-	6257	12	NNC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-5	0	intron_retention	FALSE	canonical	1	2	junction_3	12.5322723893023	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954909	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72939654_72939999_72940093_72940419_72940622_72940686_72940761_72940834_72941069_72941158_72941799_72943146_72943479_72943704_72944076_72944240_72944343_72947853_72950198_72950274_72950483_72954768
ES.37159.18	chrX	-	3276	23	NNC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	13.5702183639867	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954945	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.19	chrX	-	3216	21	NNC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-19	0	intron_retention	FALSE	canonical	0	0	junction_16	15.2459830775191	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954854	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949470_72950034_72950198_72950274_72950483_72954768
ES.37159.2	chrX	-	3611	21	NNC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_15	13.8689401181201	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTGAACATAGGTATGT	NA	False	NA	NA	False	AATACA	-23	NA	72954928	72937962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.20	chrX	-	3163	22	NNC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.127441194744	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954884	72938137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943521_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.21	chrX	-	3561	20	NIC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	23	junction_4	8.94024484224762	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTGTAATAGCCTGT	NA	False	NA	NA	False	CATAAA	-16	NA	72954938	72938138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.22	chrX	-	3783	26	Fusion	ENSMUSG00000031389.18_ENSMUSG00000031388.15	novel	6299	22	NA	NA	-6	-1	intron_retention	FALSE	canonical	1	1	junction_20	428.810261071257	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTGTAATAGCCTGT	NA	False	NA	NA	False	CATAAA	-16	NA	72965482	72938138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949826_72950034_72950198_72950274_72950483_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.23	chrX	-	3959	28	Fusion	ENSMUSG00000031389.18_ENSMUSG00000031388.15	novel	6299	22	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_17	442.153149267771	344	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTGTAATAGCCTGT	NA	False	NA	NA	False	CATAAA	-16	NA	72965479	72938138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949826_72950034_72950198_72950274_72950483_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.24	chrX	-	2919	17	NNC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-1093	18	intron_retention	FALSE	canonical	1	2	junction_13	10.6770782520313	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGGTGAAGGCAGGC	NA	False	NA	NA	False	NA	NA	NA	72950355	72939998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72940093_72940419_72940604_72940686_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948719_72949256_72949470_72949762_72949826_72950034_72950198_72950274
ES.37159.25	chrX	-	2818	17	NNC	ENSMUSG00000031389.18	novel	2367	15	NA	NA	-23	0	intron_retention	FALSE	canonical	1	2	junction_6	515.488508449752	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	72965499	72942922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948719_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.26	chrX	-	1932	10	ISM	ENSMUSG00000031389.18	ENSMUST00000148319.8	3145	20	-60	4785	-1	0	5prime_fragment	FALSE	canonical	2	2	junction_7	12.5255294853706	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	72954937	72942922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72950034_72950198_72950274_72950483_72954768
ES.37159.27	chrX	-	4383	4	ISM	ENSMUSG00000031389.18	ENSMUST00000114406.9	2749	19	-48	8032	-8	-2281	5prime_fragment	FALSE	canonical	3	29	junction_1	2.44948974278318	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATTTCTGATATTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	72954950	72945995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.28	chrX	-	4351	4	NIC	ENSMUSG00000031389.18	novel	2690	19	NA	NA	-1	-2312	intron_retention	FALSE	canonical	0	0	junction_3	14.4299072146089	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAACAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	72954937	72946026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72949826_72950034_72950198_72950274_72950495_72954768
ES.37159.29	chrX	-	2038	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	71	-1078	-1	1076	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTCCTCACTTCTGAAC	NA	False	NA	NA	False	CATAAA	-32	NA	72965459	72959402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.3	chrX	-	5529	12	NIC	ENSMUSG00000031389.18	novel	3208	21	NA	NA	-3	0	intron_retention	FALSE	canonical	3	24	junction_4	9.916177616017	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCTGAACATAGGTATG	NA	False	NA	NA	False	AATACA	-22	NA	72954945	72937963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72941069_72941158_72941653_72941737_72941799_72943146_72943250_72943450_72944076_72944240_72944343_72947853_72948076_72948185_72950483_72954768
ES.37159.30	chrX	-	2897	7	Fusion	ENSMUSG00000031387.15_ENSMUSG00000031388.15	novel	892	7	NA	NA	-200	1063	intron_retention	FALSE	canonical	3	21	junction_1	404.832784410222	855	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGACAAAAAGAGAGTC	NA	False	NA	NA	False	CATAAA	-19	NA	72965750	72959415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72961559_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.31	chrX	-	925	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	36	1	-2	1	multi-exon	FALSE	canonical	3	198	junction_1	315.02562254068	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGGGGTATGCTTTTTT	NA	False	NA	-2	True	AATAAA	-37	NA	72965514	72960479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.33	chrX	-	3337	5	FSM	ENSMUSG00000031388.15	ENSMUST00000143076.2	2156	5	13	-1194	-5	0	multi-exon	FALSE	canonical	3	1058	junction_4	30.5327692815441	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	-3	True	AATAAA	-36	NA	72965499	72960480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.35	chrX	-	3155	6	ISM	ENSMUSG00000031389.18	ENSMUST00000128329.2	2367	15	-49	17563	-49	-10098	5prime_fragment	FALSE	canonical	3	1058	junction_5	27.4328270508163	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTGGGGTATGCTTTT	NA	False	NA	-4	True	AATAAA	-35	NA	72965525	72960481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.36	chrX	-	965	8	NNC	ENSMUSG00000031388.15	novel	979	8	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	474.658072420859	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGTGGGGTATGCTTTT	NA	False	NA	-4	True	AATAAA	-35	NA	72965476	72960481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72960889_72961448_72961534_72963114_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.37	chrX	-	3608	4	NIC	ENSMUSG00000031388.15	novel	2156	5	NA	NA	8	-2	intron_retention	FALSE	canonical	3	1058	junction_3	29.698484809835	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATAGTGGGGTATGCTTT	NA	False	NA	-5	True	AATAAA	-34	NA	72965542	72960482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72963476_72963568_72963615_72964588_72964977_72965361
ES.37159.38	chrX	-	4321	4	NIC	ENSMUSG00000031388.15	novel	2156	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1058	junction_3	31.5841028929991	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATAGTGGGGTATGCTTT	NA	False	NA	-5	True	AATAAA	-34	NA	72965511	72960482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72963476_72963568_72964648_72964877_72964977_72965361
ES.37159.39	chrX	-	4096	13	Fusion	ENSMUSG00000031387.15_ENSMUSG00000031388.15	novel	1318	11	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	383	junction_11	576.015691096075	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATAGTGGGGTATG	NA	False	NA	-9	True	AATAAA	-30	NA	72974378	72960486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973687_72973834_72974124_72974319
ES.37159.4	chrX	-	3252	22	NIC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	12.2770364332263	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCCTGAACATAGGTAT	NA	False	NA	NA	False	AATACA	-21	NA	72954830	72937964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950495_72954768
ES.37159.41	chrX	-	2708	6	NIC	ENSMUSG00000031388.15	novel	834	7	NA	NA	5	4	intron_retention	FALSE	canonical	3	198	junction_1	364.424697296986	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGCATAGTGGGGTA	NA	False	NA	-11	True	AATAAA	-28	NA	72965525	72960488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72960802_72961448_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.42	chrX	-	2395	19	Fusion	ENSMUSG00000031387.15_ENSMUSG00000031388.15	novel	1418	11	NA	NA	-8	2	multi-exon	FALSE	canonical	2	3	junction_8	601.257409286757	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGTGCATAGTGGGG	NA	False	NA	-13	True	AATAAA	-26	NA	72974406	72960490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361_72965530_72965719_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.43	chrX	-	4108	5	NNC	ENSMUSG00000031388.15	novel	979	8	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	476.084748232917	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGTGCATAGTGG	NA	False	NA	-15	True	AATAAA	-24	NA	72965511	72960492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72963153_72963359_72963476_72963564_72964648_72964877_72964977_72965361
ES.37159.45	chrX	-	861	8	NNC	ENSMUSG00000031388.15	novel	962	8	NA	NA	63	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	456.027568088973	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGAATGTGCATAG	NA	False	NA	-18	True	AATAAA	-21	NA	72965371	72960495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965266
ES.37159.46	chrX	-	1544	7	NIC	ENSMUSG00000031388.15	novel	797	8	NA	NA	4	-3	intron_retention	FALSE	canonical	3	46	junction_2	391.366587173146	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGAATGTGCATAG	NA	False	NA	-18	True	AATAAA	-21	NA	72965508	72960495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72961534_72963107_72963147_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ES.37159.47	chrX	-	1494	7	ISM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	-93	15	-73	-3	intron_retention	FALSE	canonical	3	794	junction_1	118.899700962151	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGAATGTGCATAG	NA	False	NA	-18	True	AATAAA	-21	NA	72965623	72960495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877
ES.37159.49	chrX	-	3267	15	Fusion	ENSMUSG00000031387.15_ENSMUSG00000031388.15	novel	1418	11	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	225	junction_13	584.031048238125	870	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTGTGAATGTGCATA	NA	False	NA	-19	True	AATAAA	-20	NA	72974407	72960496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_72961534_72963107_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
ES.37159.5	chrX	-	3299	22	NNC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.2163044836847	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTCCTGAACATAGGT	NA	False	NA	NA	False	AATACA	-19	NA	72954897	72937966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948309_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.50	chrX	-	993	8	NNC	ENSMUSG00000031388.15	novel	979	8	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	465.707887773757	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTGTGAATGTGCATA	NA	False	NA	-19	True	AATAAA	-20	NA	72965499	72960496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963628_72964588_72964648_72964877_72964977_72965361
ES.37159.52	chrX	-	986	2	FSM	ENSMUSG00000031388.15	ENSMUST00000153929.2	355	2	8	-639	8	503	multi-exon	FALSE	canonical	3	1058	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGAAACCAATACAGATT	NA	False	NA	NA	False	NA	NA	NA	72965450	72964079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72964977_72965361
ES.37159.53	chrX	-	1818	8	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	4	2	intron_retention	FALSE	canonical	3	1962	junction_4	96.4504737030929	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGCGCGCCTCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	72974452	72965724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72974124_72974319
ES.37159.54	chrX	-	1458	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	-38	-2	-38	2	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGCGCGCCTCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	72974494	72965724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.57	chrX	-	1390	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	-73	1	-15	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974471	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ES.37159.58	chrX	-	1633	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	225	junction_7	606.585100686623	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974408	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973460_72973610_72973687_72974013_72974124_72974319
ES.37159.59	chrX	-	1197	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	682.793846999224	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974422	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974319
ES.37159.6	chrX	-	3802	19	NNC	ENSMUSG00000031389.18	novel	3145	20	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_16	16.4569209426788	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATTCCTGAACATAGGT	NA	False	NA	NA	False	AATACA	-19	NA	72954896	72937966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72949470_72950274_72950481_72954768
ES.37159.60	chrX	-	1466	10	NIC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	383	junction_8	531.748478553954	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974402	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72974124_72974319
ES.37159.61	chrX	-	1387	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	619.869994434317	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974420	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971878_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.62	chrX	-	1308	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_7	628.476602194682	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974423	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973792_72973869_72974013_72974124_72974319
ES.37159.63	chrX	-	1836	10	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	803.20773568652	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974405	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72970300_72971218_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
ES.37159.64	chrX	-	1337	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_8	580.11297324607	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974452	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
ES.37159.65	chrX	-	5230	9	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_7	680.193986576624	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974407	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974015_72974124_72974319
ES.37159.66	chrX	-	1409	9	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_4	858.176263945817	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974367	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971878_72971967_72972721_72972947_72973286_72973687_72974013_72974124_72974319
ES.37159.67	chrX	-	2111	7	FSM	ENSMUSG00000031387.15	ENSMUST00000135711.8	2125	7	15	-1	-10	0	multi-exon	FALSE	canonical	3	1962	junction_4	102.832252830628	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974408	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72974124_72974319
ES.37159.7	chrX	-	3347	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-5	11	1	-5	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGATTCCTGAACATAG	NA	False	NA	NA	False	AATACA	-17	NA	72954941	72937968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ES.37159.70	chrX	-	1336	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	621.391502999518	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974381	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973798_72973869_72974013_72974124_72974319
ES.37159.71	chrX	-	1204	11	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	741.584418660479	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974410	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971543_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ES.37159.73	chrX	-	1201	12	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_11	749.238257793974	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974445	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971446_72971543_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974426
ES.37159.74	chrX	-	1783	8	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	225	junction_6	648.385687689048	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974407	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973687_72974013_72974124_72974319
ES.37159.75	chrX	-	1403	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_7	616.226135440554	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974402	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973570_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.76	chrX	-	1402	10	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	807.135737509765	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974363	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966199_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72974013_72974124_72974319
ES.37159.77	chrX	-	1745	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	1767	junction_6	145.076225175289	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTGTGTGCGCGCCTCT	NA	False	NA	-3	True	AATAAA	-17	NA	72974444	72965727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.79	chrX	-	1860	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	1785	junction_6	127.432089757643	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974410	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.8	chrX	-	3778	22	NNC	ENSMUSG00000031389.18	novel	3353	22	NA	NA	8	-6	intron_retention	FALSE	canonical	0	0	junction_16	16.578542534323	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAGATTCCTGAACATA	NA	False	NA	NA	False	AATACA	-16	NA	72954928	72937969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72948624_72948719_72949256_72949470_72949762_72949826_72950034_72950483_72953761_72953942_72954768
ES.37159.80	chrX	-	2116	7	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	774.91004854327	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974368	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973460_72973608
ES.37159.81	chrX	-	1331	10	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	649.322686048535	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974379	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973756_72974013_72974124_72974319
ES.37159.82	chrX	-	1234	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	40	junction_4	608.18780816455	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974407	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971463_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.83	chrX	-	1279	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	607.157977794906	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974445	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971543_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ES.37159.85	chrX	-	1254	11	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_10	730.287621420492	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974444	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974426
ES.37159.86	chrX	-	1572	9	NIC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	383	junction_7	563.258377656294	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974359	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973687_72973834_72974124_72974319
ES.37159.88	chrX	-	896	9	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	687.144078323462	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974423	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972752_72973834_72973869_72974013_72974124_72974319
ES.37159.89	chrX	-	1622	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	1962	junction_4	90.2800330914871	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974406	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973869_72974013_72974124_72974319
ES.37159.9	chrX	-	3159	20	NIC	ENSMUSG00000031389.18	novel	3051	21	NA	NA	-11	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	14.0017806544684	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAGATTCCTGAACAT	NA	False	NA	NA	False	AATACA	-15	NA	72954953	72937970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72950034_72950198_72950274_72950483_72954768
ES.37159.90	chrX	-	3824	5	NIC	ENSMUSG00000031387.15	novel	2125	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	1965	junction_1	114.040562958975	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974368	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72971967_72972721_72974124_72974319
ES.37159.91	chrX	-	2285	8	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-16	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	726.817805539311	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974378	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72970305_72971223_72971595_72971884_72971967_72972721_72972947_72973286_72974124_72974319
ES.37159.93	chrX	-	1297	11	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_10	590.512192930849	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974445	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974426
ES.37159.94	chrX	-	1618	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	1767	junction_7	133.405397192168	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974408	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72974124_72974319
ES.37159.95	chrX	-	1457	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	225	junction_7	614.894249037995	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	False	NA	-5	True	AATAAA	-15	NA	72974423	72965729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973687_72974013_72974124_72974319
ES.37159.97	chrX	-	1322	11	NNC	ENSMUSG00000031387.15	novel	1318	11	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	872.562439026572	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGCTTGTGTGCGCGCC	NA	False	NA	-6	True	AATAAA	-14	NA	72974402	72965730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971878_72971965_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ES.37159.98	chrX	-	3233	7	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1962	junction_3	103.286010669403	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGCTTGTGTGCGCGCC	NA	False	NA	-6	True	AATAAA	-14	NA	72974408	72965730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72965870_72965956_72966045_72969821_72971595_72971884_72971967_72972721_72972947_72973286_72974124_72974319
ES.3716.1	chr10	+	2563	8	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	-33816	609	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	327.861344510892	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGTGTCGTGTTTT	3066	False	NA	32	True	AATAAA	-34	NA	108134165	108250710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108134385_108134702_108134821_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.10	chr10	+	2272	7	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	5	589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.202538970933	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTTGGTATTTAGG	5603	False	NA	12	True	AATAAA	-14	NA	108167986	108250690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168605_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.11	chr10	+	3709	7	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	16	589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	269.844193728323	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTTGGTATTTAGG	5614	False	NA	12	True	AATAAA	-14	NA	108167997	108250690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108248203_108248410
ES.3716.12	chr10	+	1223	4	ISM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	16	22188	16	-21702	5prime_fragment	FALSE	canonical	3	604	junction_1	61.4563982746214	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTGGGCCTGGAGA	5614	False	NA	NA	False	NA	NA	NA	108167997	108227913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558
ES.3716.13	chr10	+	2303	6	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	17	589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	266.872553852958	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTTGGTATTTAGG	5615	False	NA	12	True	AATAAA	-14	NA	108167998	108250690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168548_108169173_108218590_108218736_108245315_108245472_108247824_108247930_108249528
ES.3716.14	chr10	+	3136	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	21	-1412	21	1412	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	5619	False	NA	NA	False	NA	NA	NA	108168002	108251513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.15	chr10	+	2304	7	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	21	589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	257.501941740252	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTTGGTATTTAGG	5619	False	NA	12	True	AATAAA	-14	NA	108168002	108250690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245332_108245472_108247824_108247930_108249528
ES.3716.19	chr10	+	2349	7	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	185	605	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	264.853838098593	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTGTTTTGTGTCGTG	5783	False	NA	28	True	AATAAA	-30	NA	108168166	108250706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168294_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.2	chr10	+	2642	9	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	-33815	588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	350.280512589553	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATCCTTGGTATTTAG	3067	False	NA	11	True	AATAAA	-13	NA	108134166	108250689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108134385_108134702_108134821_108166448_108166550_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.20	chr10	+	2329	6	ISM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	461	-606	-235	606	3prime_fragment	FALSE	canonical	3	675	junction_4	49.1634010214916	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGTTTTGTGTCGTGT	6059	False	NA	29	True	AATAAA	-31	NA	108168442	108250707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.21	chr10	+	1435	6	ISM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	548	201	-148	-201	3prime_fragment	FALSE	canonical	3	675	junction_4	49.1634010214916	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCCATTTGCATATAT	6146	False	NA	NA	False	AATATA	-11	NA	108168529	108249900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.22	chr10	+	179	1	Intergenic	novelGene_2832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	108229449	108229628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_108229400_108229600
ES.3716.3	chr10	+	266	1	Intergenic	novelGene_2827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAATAAAAATATAAAA	5873	False	NA	NA	False	NA	NA	NA	108136972	108137238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_108137000_108137200
ES.3716.4	chr10	+	266	1	Intergenic	novelGene_2831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGATCATTTTAGCATCTC	4720	False	NA	NA	False	AATAAA	-17	NA	108167103	108167369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_108167100_108167400
ES.3716.5	chr10	+	2583	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-228	-610	-228	610	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTGTCGTGTTTTC	5370	False	NA	33	True	AATAAA	-35	NA	108167753	108250711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.7	chr10	+	3536	7	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	-108	292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	269.844193728323	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTCTTCAGGCCTCAC	5490	False	NA	NA	False	AGTAAA	-22	NA	108167873	108250393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108248203_108248410
ES.3716.8	chr10	+	2360	8	NNC	ENSMUSG00000035873.9	novel	1745	7	NA	NA	-78	606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	252.01384801601	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGTTTTGTGTCGTGT	5520	False	NA	29	True	AATAAA	-31	NA	108167903	108250707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_108168110_108168548_108168996_108169064_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.3716.9	chr10	+	1562	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	-54	237	-54	-237	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTGTGATATCCAGAT	5544	False	NA	NA	False	ATTAAA	-21	NA	108167927	108249864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ES.37160.1	chrX	-	194	1	Intergenic	novelGene_30404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGACAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	72975220	72975026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72975000_72975200
ES.37161.1	chrX	-	3256	1	Intergenic	novelGene_30405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCCTGGTGTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	72985029	72981773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_72981800_72985000
ES.37162.1	chrX	-	5730	15	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-3389	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	126.991663714833	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTGTCAAGAGTGTCT	NA	False	NA	1	True	ATTAAA	-34	NA	72996248	72986386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995791_72995999_72996167
ES.37162.11	chrX	-	6227	19	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	2743	1	at_least_one_novel_splicesite	FALSE	non_canonical	2	6	junction_1	112.949349513645	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATTTACCCGTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	72998292	72986399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72987297_72987351_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187
ES.37162.15	chrX	-	8592	28	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	117.069650870782	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010586	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416_73010141_73010234_73010313_73010384
ES.37162.16	chrX	-	6617	19	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	2115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	114.02679996874	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72998920	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998328_72998619
ES.37162.17	chrX	-	8836	27	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-623	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.708346112641	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010586	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72987296_72987349_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.18	chrX	-	7013	27	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	135.05574128647	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73009963	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72993958_72994029_72994130_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.21	chrX	-	8879	23	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-413	0	intron_retention	FALSE	canonical	3	303	junction_14	60.8526875887734	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010376	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.22	chrX	-	7686	20	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	0	intron_retention	FALSE	non_canonical	0	0	junction_11	163.396480905493	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010586	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72987297_72987351_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72991124_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72994961_72998206_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001076_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.23	chrX	-	5763	14	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-3352	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	156.356026748545	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72996211	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167
ES.37162.24	chrX	-	4520	11	NNC	ENSMUSG00000031386.15	novel	3480	10	NA	NA	-1169	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	146.344661672368	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72994028	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72992895_72993020
ES.37162.25	chrX	-	8507	27	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	96.8928600638919	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010586	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416_73010144_73010394
ES.37162.26	chrX	-	8252	26	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	128.133655219852	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73009943	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995257_72995399_72995528_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.28	chrX	-	9192	26	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-990	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	95.7215628790086	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	73010953	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989107_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.3	chrX	-	8725	25	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-358	7	intron_retention	FALSE	canonical	3	79	junction_6	96.59634654927	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCGTGTGTCAAGAGT	NA	False	NA	-3	True	ATTAAA	-30	NA	73010321	72986390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.30	chrX	-	5345	12	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-2796	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	135.924626658422	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72995655	72986400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531
ES.37162.31	chrX	-	6142	18	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	145.349667875634	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTGGTATTTACCCGT	NA	False	NA	-14	True	ATTAAA	-19	NA	73009962	72986401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72993704_72998729_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.33	chrX	-	8378	21	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-1020	0	intron_retention	FALSE	canonical	3	303	junction_15	64.7278147321536	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTGGTATTTACCCG	NA	False	NA	-15	True	ATTAAA	-18	NA	73002055	72986402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857
ES.37162.34	chrX	-	8161	27	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	105.321970431726	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTGGTATTTACCCG	NA	False	NA	-15	True	ATTAAA	-18	NA	73009985	72986402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72992895_72993020_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.36	chrX	-	5803	14	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-3362	-1	intron_retention	FALSE	canonical	3	311	junction_10	73.4287885113769	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	72996221	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995999_72996167
ES.37162.37	chrX	-	8140	26	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	98.2701256740826	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73009962	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002899_73003189_73003339_73009416
ES.37162.38	chrX	-	4706	11	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	147.148394486654	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73010586	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72993715_73010209
ES.37162.39	chrX	-	9358	24	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	13	-1	intron_retention	FALSE	canonical	3	139	junction_6	78.2287132004491	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73009944	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.4	chrX	-	9072	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-934	0	-934	0	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATTTACCCGTGTGT	NA	False	NA	-10	True	ATTAAA	-23	NA	73010897	72986397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.41	chrX	-	6369	23	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-928	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	128.868606606089	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73010891	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991631_72995625_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416_73010566_73010872
ES.37162.42	chrX	-	8672	25	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	279	-1	intron_retention	FALSE	canonical	3	79	junction_6	97.0748476262861	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73009678	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.44	chrX	-	7742	10	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-3796	-1	intron_retention	FALSE	canonical	3	311	junction_5	72.0971566707037	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	72996655	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989916_72990315_72991121_72991447_72994308_72994848_72995070_72995259_72995399_72995531_72995999_72996167_72996273_72996431
ES.37162.45	chrX	-	7909	20	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-935	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	111.883893122139	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73010898	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72994961_72998206_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.46	chrX	-	8772	26	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	98.7245379832187	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73010586	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999258_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.47	chrX	-	7813	26	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	1416	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	98.8077405874661	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATCTGGTATTTACCC	NA	False	NA	-16	True	ATTAAA	-17	NA	73008541	72986403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73008313
ES.37162.48	chrX	-	6753	19	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	124.587566508039	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCATCTGGTATTTACC	NA	False	NA	-17	True	ATTAAA	-16	NA	73009943	72986404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72996952_73003239_73003339_73009416
ES.37162.5	chrX	-	8659	27	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.8928600638919	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATTTACCCGTGTGT	NA	False	NA	-10	True	ATTAAA	-23	NA	73010586	72986397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994029_72994130_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.52	chrX	-	6096	1	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	357	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	672	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72992502	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72986400_72992500
ES.37162.53	chrX	-	6414	4	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-856	-4	intron_retention	FALSE	canonical	3	331	junction_3	82.6935440177903	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72993715	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72989916_72990315_72991121_72991447
ES.37162.54	chrX	-	4926	11	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-2118	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	148.130516774904	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72994977	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72990999_72991447_72991893_72992507_72992672_72992803_72994308_72994848
ES.37162.57	chrX	-	14781	15	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	2195	-4	intron_retention	FALSE	canonical	3	303	junction_9	28.1157411063479	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	73007762	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996657_72996930_72997129_72998187_72998349_72998619_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728
ES.37162.59	chrX	-	4232	7	NIC	ENSMUSG00000031386.15	novel	3480	10	NA	NA	204	-4	intron_retention	FALSE	canonical	3	79	junction_5	153.285590393299	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72992655	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989916_72990315_72990454_72990540_72991124_72991447_72991893_72992507
ES.37162.60	chrX	-	6577	7	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-2182	-4	intron_retention	FALSE	canonical	0	0	junction_2	164.146699293312	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72995041	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72989916_72990322_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848
ES.37162.61	chrX	-	2212	2	NIC	ENSMUSG00000031386.15	novel	3480	10	NA	NA	1997	-4	intron_retention	FALSE	canonical	3	450	junction_1	0	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	False	NA	-19	True	ATTAAA	-14	NA	72989041	72986406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988316_72988738
ES.37162.65	chrX	-	8323	26	NNC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	104.671172726783	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACCATCTGGTATTT	NA	False	NA	-20	True	ATTAAA	-13	NA	73009959	72986407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989107_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.7	chrX	-	8900	25	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-624	1	intron_retention	FALSE	canonical	3	303	junction_16	62.7692948423033	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATTTACCCGTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	73010587	72986399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.70	chrX	-	7493	20	NNC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	111.320878320908	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAACCATCTGGTATT	NA	False	NA	-21	True	ATTAAA	-12	NA	73010586	72986408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998659_73009461
ES.37162.71	chrX	-	7458	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-623	1303	-623	1226	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGCCTGCACTTGTTTG	NA	False	NA	1	True	ATTAAA	-29	NA	73010586	72987700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.72	chrX	-	7590	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-623	1226	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGCCTGCACTTGTTTG	NA	False	NA	1	True	ATTAAA	-29	NA	73010586	72987700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.74	chrX	-	8443	24	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-623	1221	intron_retention	FALSE	canonical	3	303	junction_16	64.0646530713849	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACTTAAGCCTGCACTT	NA	False	NA	-4	True	ATTAAA	-24	NA	73010586	72987705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73003339_73009416
ES.37162.76	chrX	-	8086	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-1247	1098	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTAAGTGCAAGTTGTGC	NA	False	NA	30	True	NA	NA	NA	73011210	72987828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.77	chrX	-	7589	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-883	1432	-883	1097	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGTAAGTGCAAGTTGTG	NA	False	NA	29	True	NA	NA	NA	73010846	72987829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.8	chrX	-	8921	26	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-653	1	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	79.9086878881139	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATTTACCCGTGT	NA	False	NA	-12	True	ATTAAA	-21	NA	73010616	72986399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.82	chrX	-	7336	17	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	832	1058	intron_retention	FALSE	canonical	3	303	junction_13	63.2707475852783	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATTGGGAGGAAGCAGA	NA	False	NA	-10	True	AATAAA	-19	NA	73000203	72987868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172
ES.37162.84	chrX	-	1585	7	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	399	1053	intron_retention	FALSE	canonical	3	331	junction_6	60.1387285088957	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTATTGGGAGGAA	NA	False	NA	-15	True	AATAAA	-14	NA	72991553	72987873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72991121_72991447
ES.37162.86	chrX	-	6361	23	ISM	ENSMUSG00000031386.15	ENSMUST00000114372.3	8262	26	15	3167	15	-643	5prime_fragment	FALSE	canonical	3	79	junction_4	93.7475509321984	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGTTGGTAAATGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	73009942	72989569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.87	chrX	-	6868	23	ISM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	-623	3174	-623	-645	5prime_fragment	FALSE	canonical	3	303	junction_14	58.0774810202103	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCGTTGGTAAATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	73010586	72989571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.88	chrX	-	6613	21	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-111	-792	intron_retention	FALSE	canonical	3	139	junction_4	70.6663109267776	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCCATCTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	73010074	72989718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72989916_72990315_72990454_72990540_72991121_72991447_72992025_72992507_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37162.89	chrX	-	6722	23	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-621	-792	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	82.8022761894186	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCCATCTTTCTGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	73010584	72989718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ES.37163.1	chrX	+	169	1	Intergenic	novelGene_30406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTGTTGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	73040198	73040367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73040200_73040400
ES.37164.1	chrX	-	213	1	Intergenic	novelGene_30407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTCTGCCCTGGTACTT	NA	False	NA	NA	False	NA	NA	NA	73047201	73046988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73047000_73047200
ES.37165.1	chrX	-	178	1	Intergenic	novelGene_30408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	73054341	73054163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73054200_73054300
ES.37166.1	chrX	+	157	1	Intergenic	novelGene_30409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	73056152	73056309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73056200_73056300
ES.37167.10	chrX	-	3868	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-34	1	-34	-1	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067558	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.100	chrX	-	3082	12	NIC	ENSMUSG00000031392.19	novel	2052	14	NA	NA	-2	-359	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	159.983160270848	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067434	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066454_73066672_73066971_73067140_73067215
ES.37167.102	chrX	-	2766	9	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-2	-359	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	125.259667790554	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067434	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73066971_73067140_73067215
ES.37167.103	chrX	-	4510	5	NIC	ENSMUSG00000031392.19	novel	2812	12	NA	NA	-541	-360	intron_retention	FALSE	canonical	3	354	junction_3	25.4103817366052	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTGTGGAATTTGTTG	NA	False	NA	-11	True	AATAAA	-23	NA	73065135	73057891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548
ES.37167.104	chrX	-	6136	6	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-40	-361	intron_retention	FALSE	canonical	3	345	junction_5	27.2646291007232	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTGTGGAATTTGTT	NA	False	NA	-12	True	AATAAA	-22	NA	73067477	73057892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73067140_73067215
ES.37167.105	chrX	-	4112	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-364	intron_retention	FALSE	canonical	3	311	junction_3	31.7482380185728	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTAAACTTGTGGAATTT	NA	False	NA	-15	True	AATAAA	-19	NA	73067436	73057895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066804_73066971_73067140_73067215
ES.37167.106	chrX	-	5075	5	NIC	ENSMUSG00000031392.19	novel	2052	14	NA	NA	-61	-364	intron_retention	FALSE	canonical	3	354	junction_3	25.2623732060153	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTAAACTTGTGGAATTT	NA	False	NA	-15	True	AATAAA	-19	NA	73066318	73057895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73061973_73063505_73063572_73063933_73064142_73064548
ES.37167.107	chrX	-	3859	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	-364	intron_retention	FALSE	canonical	3	272	junction_9	40.8319727664486	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTAAACTTGTGGAATTT	NA	False	NA	-15	True	AATAAA	-19	NA	73067441	73057895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066559_73066671_73066804_73066971
ES.37167.108	chrX	-	3176	12	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	18	-364	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	139.384894304694	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTAAACTTGTGGAATTT	NA	False	NA	-15	True	AATAAA	-19	NA	73067501	73057895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73064013_73064142_73064548_73064668_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.109	chrX	-	4460	9	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-39	-365	intron_retention	FALSE	canonical	3	311	junction_3	31.473947559847	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTAAACTTGTGGAATT	NA	False	NA	-16	True	AATAAA	-18	NA	73067476	73057896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73064142_73064548_73064668_73065454_73065570_73065790_73067140_73067215
ES.37167.110	chrX	-	3419	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-366	intron_retention	FALSE	canonical	3	9	junction_9	143.169968918066	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTAAACTTGTGGAAT	NA	False	NA	-17	True	AATAAA	-17	NA	73067436	73057897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066672_73066971_73067140_73067215
ES.37167.112	chrX	-	3839	8	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2812	12	NA	NA	-5	-367	intron_retention	FALSE	canonical	3	13	junction_7	164.498123554833	626	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGTTAAACTTGTGGAA	NA	False	NA	-18	True	AATAAA	-16	NA	73067529	73057898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790
ES.37167.114	chrX	-	3627	15	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-11	-369	combination_of_known_junctions	FALSE	canonical	3	20	junction_10	139.202832483497	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73067448	73057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.116	chrX	-	3599	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-25	-369	intron_retention	FALSE	canonical	0	0	junction_7	153.130622849647	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73067462	73057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066671_73066804_73066971_73067140_73067215
ES.37167.117	chrX	-	3379	15	Fusion	ENSMUSG00000031393.17_ENSMUSG00000031392.19	novel	2890	15	NA	NA	-7	-369	multi-exon	FALSE	canonical	0	0	junction_13	114.995030948546	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73129225	73057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73123514_73123639_73129115
ES.37167.118	chrX	-	3765	13	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	0	-369	intron_retention	FALSE	canonical	3	20	junction_9	99.4952539348262	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73067519	73057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.119	chrX	-	3675	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-11	-369	intron_retention	FALSE	canonical	3	283	junction_9	37.0117247449378	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTTAAACTTGTGG	NA	False	NA	-20	True	AATAAA	-14	NA	73067448	73057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.12	chrX	-	3940	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	9	junction_10	106.419488055603	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067465	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066672_73066971_73067140_73067215
ES.37167.120	chrX	-	3478	15	NNC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-18	-370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.695138672584	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGGTTAAACTTGTG	NA	False	NA	-21	True	AATAAA	-13	NA	73067542	73057901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061008_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.121	chrX	-	3885	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-370	intron_retention	FALSE	canonical	3	311	junction_3	30.6978826631414	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGGTTAAACTTGTG	NA	False	NA	-21	True	AATAAA	-13	NA	73067436	73057901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.123	chrX	-	3352	12	NNC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	-2	-370	intron_retention	FALSE	canonical	3	30	junction_3	101.755825061194	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGGTTAAACTTGTG	NA	False	NA	-21	True	AATAAA	-13	NA	73067434	73057901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971
ES.37167.124	chrX	-	3192	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-18	-370	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	103.349293122347	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGGTTAAACTTGTG	NA	False	NA	-21	True	AATAAA	-13	NA	73067455	73057901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.125	chrX	-	3001	11	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2846	13	NA	NA	-6	-376	intron_retention	FALSE	canonical	0	0	junction_8	143.728215740682	626	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACTGTCTGGTTAAA	NA	False	NA	-27	True	AATAAA	-7	NA	73067530	73057907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73066454_73066559_73066671_73066804_73066971
ES.37167.127	chrX	-	2995	9	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2812	12	NA	NA	-35	26	intron_retention	FALSE	canonical	0	0	junction_1	179.540211373386	624	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067472	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73058712_73059011_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790
ES.37167.129	chrX	-	4364	5	NIC	ENSMUSG00000031392.19	novel	2052	14	NA	NA	264	26	intron_retention	FALSE	canonical	3	354	junction_2	25.3808490795718	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73065838	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454
ES.37167.13	chrX	-	4248	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	9	-2	intron_retention	FALSE	canonical	3	20	junction_9	102.527238872135	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067510	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066804_73066971_73067140_73067215
ES.37167.130	chrX	-	2974	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-5	866	-5	26	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067529	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.131	chrX	-	3066	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	26	intron_retention	FALSE	canonical	3	272	junction_10	42.1586784264719	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067437	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.132	chrX	-	2889	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-1	26	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	98.3373014276424	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067525	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.133	chrX	-	2702	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	26	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	112.347968898875	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067437	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.134	chrX	-	4121	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	2	26	intron_retention	FALSE	canonical	3	272	junction_7	40.1942812712652	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067430	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.135	chrX	-	5859	6	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	-2	26	intron_retention	FALSE	canonical	3	327	junction_5	31.9724881734281	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067526	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73060304_73060735_73061973_73063505_73063572_73063933_73064668_73065454_73066804_73066971
ES.37167.136	chrX	-	3275	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-5	26	intron_retention	FALSE	canonical	3	23	junction_4	121.138289599534	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067529	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.137	chrX	-	2882	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-9	26	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	105.248873836194	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067446	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066550_73066671_73066804_73066971_73067140_73067215
ES.37167.138	chrX	-	3090	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	-9	-191	-4	26	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067528	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.139	chrX	-	3281	12	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	26	intron_retention	FALSE	non_canonical	0	0	junction_5	108.887234109725	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067437	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063564_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.14	chrX	-	3827	12	NIC	ENSMUSG00000031392.19	novel	2052	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	9	junction_10	135.319884253498	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067434	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066672_73066971_73067140_73067215
ES.37167.140	chrX	-	2821	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-14	26	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	99.4242002614712	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067451	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066196_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.141	chrX	-	3194	13	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-7	26	intron_retention	FALSE	non_canonical	0	0	junction_10	122.727340067322	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067531	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066268_73066454_73066557_73066671_73066804_73066971_73067140_73067215
ES.37167.142	chrX	-	2853	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	8	26	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	140.923034934492	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067406	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.143	chrX	-	3174	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-32	26	intron_retention	FALSE	canonical	3	272	junction_10	44.0247864069983	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067469	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971
ES.37167.145	chrX	-	3092	14	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	1	26	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	114.398348976376	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067518	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.147	chrX	-	4821	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	26	intron_retention	FALSE	canonical	3	272	junction_8	43.3635791880698	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067528	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.148	chrX	-	4470	7	NIC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	-8	26	intron_retention	FALSE	canonical	3	354	junction_4	20.9158366369175	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067422	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454
ES.37167.149	chrX	-	2680	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-12	26	intron_retention	FALSE	canonical	3	9	junction_10	111.430516466541	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73066994	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066672_73066971
ES.37167.15	chrX	-	4090	15	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	20	junction_10	139.202832483497	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067532	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.150	chrX	-	2592	13	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-3	26	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_11	142.92499975706	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067440	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066672_73066971_73067140_73067215
ES.37167.151	chrX	-	3050	13	ISM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-5	866	-5	26	intron_retention	FALSE	canonical	3	198	junction_10	59.1220489045049	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067529	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971
ES.37167.152	chrX	-	3314	12	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-2	26	intron_retention	FALSE	canonical	3	90	junction_9	86.0824129435381	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTACAGTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	73067434	73058385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971
ES.37167.154	chrX	-	2637	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	33	25	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	129.233150161217	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTCTTACAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	73067081	73058386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971
ES.37167.155	chrX	-	4088	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	327	junction_8	26.9901673911532	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067531	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.156	chrX	-	3710	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	30	0	intron_retention	FALSE	canonical	3	272	junction_9	42.4851943097497	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067489	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.157	chrX	-	3108	12	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	20	junction_9	134.333247886007	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067531	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066804_73066971_73067140_73067215
ES.37167.158	chrX	-	5119	7	NIC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	272	junction_6	46.2808455699187	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067423	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73066559_73066671
ES.37167.159	chrX	-	3401	12	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-40	0	intron_retention	FALSE	canonical	3	9	junction_10	156.175785680937	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067477	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066672_73066971_73067140_73067215
ES.37167.160	chrX	-	4545	8	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	30	junction_3	122.353619330469	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067462	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73066804_73066971_73067140_73067215
ES.37167.161	chrX	-	3208	11	NNC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_3	105.934177676518	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067432	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.162	chrX	-	2985	12	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	30	junction_3	101.129489041125	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067430	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.163	chrX	-	2679	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	99.6513448606911	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067531	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.164	chrX	-	3412	11	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2846	13	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_9	113.19810069078	624	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	73067472	73058411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066004_73066078_73066804_73066971
ES.37167.166	chrX	-	5885	7	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	22	-1	intron_retention	FALSE	canonical	3	23	junction_2	133.300933563456	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-34	NA	73067311	73058412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73060304_73060735_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73066804_73066971
ES.37167.167	chrX	-	5166	9	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	272	junction_6	41.7849778628636	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-34	NA	73067456	73058412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.169	chrX	-	2651	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	128.975099879352	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-33	NA	73067430	73058413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.17	chrX	-	4939	10	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	272	junction_8	40.2354183386838	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067529	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066559_73066671_73066804_73066971
ES.37167.171	chrX	-	2783	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-5	1057	-5	0	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACTGCTAGCTACAC	NA	False	NA	NA	False	NA	NA	NA	73067529	73058576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.172	chrX	-	2402	14	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-2	-12	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	112.677473426375	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	73067434	73058588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.173	chrX	-	3008	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-32	-12	intron_retention	FALSE	canonical	3	283	junction_9	37.0117247449378	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	73067469	73058588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.174	chrX	-	2900	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	-14	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	101.479819896144	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAACAGAAG	NA	False	NA	NA	False	NA	NA	NA	73067528	73058590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.175	chrX	-	3090	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-27	-16	intron_retention	FALSE	canonical	3	23	junction_4	121.138289599534	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	73067551	73058592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.176	chrX	-	3275	10	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	-2	-208	intron_retention	FALSE	canonical	3	272	junction_7	43.4948556628919	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73067526	73060361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.177	chrX	-	3702	7	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	-4	-208	intron_retention	FALSE	canonical	3	9	junction_5	137.904254224927	616	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73067528	73060361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066672_73066971_73067140_73067215
ES.37167.178	chrX	-	5336	1	ISM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	53739	3	53667	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAAGGTCTGGGCTTT	6921	False	NA	NA	False	GATAAA	-15	NA	73075536	73070200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73070200_73075500
ES.37167.179	chrX	-	10135	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	72	-8468	-6	8	multi-exon	FALSE	canonical	3	119	junction_2	51.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGTTTGTGTCTTTTGTT	NA	False	NA	NA	False	TATAAA	-30	NA	73129224	73070425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73080101_73080587_73080939_73129115
ES.37167.18	chrX	-	4565	10	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	30	junction_2	108.782941654755	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067436	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060847_73061735_73061973_73063505_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.180	chrX	-	7282	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	-10	-5533	-10	-2927	multi-exon	FALSE	canonical	3	119	junction_2	51.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTGTCTGCTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	73129306	73073360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73080101_73080587_73080939_73129115
ES.37167.181	chrX	-	4082	3	NNC	ENSMUSG00000031393.17	novel	10538	4	NA	NA	-10	-2927	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTGTCTGCTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	73129228	73073360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73077284_73123592_73123639_73129115
ES.37167.182	chrX	-	7298	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	75	3165	3	-2929	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACATCTGTCTGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	73129200	73073362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ES.37167.183	chrX	-	1938	5	NNC	ENSMUSG00000031393.17	novel	1675	5	NA	NA	8	2	intron_retention	FALSE	canonical	1	2	junction_3	91.2811590636315	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129267	73078891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73080101_73080587_73080939_73123514_73123639_73124088_73124191_73129115
ES.37167.184	chrX	-	1839	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	5	8694	5	2	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTAGAGTTTCGTGGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	73129270	73078891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ES.37167.185	chrX	-	1751	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	-11	-1	-11	1	multi-exon	FALSE	canonical	3	119	junction_2	51.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGAGTTTCGTGGCT	NA	False	NA	NA	False	AATAAA	-23	NA	73129307	73078892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73080101_73080587_73080939_73129115
ES.37167.19	chrX	-	3781	15	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	1	-2	intron_retention	FALSE	canonical	2	8	junction_3	125.38978004118	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067436	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.2	chrX	-	4299	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	92	-556	0	556	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTTATTTTATAAGCTT	NA	False	NA	NA	False	NA	NA	NA	73067432	73056963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.20	chrX	-	4985	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	272	junction_7	40.1942812712652	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTTTTAATTTTCT	NA	False	NA	-2	True	NA	NA	NA	73067430	73057521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.21	chrX	-	4406	10	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	1	intron_retention	FALSE	canonical	1	10	junction_5	115.943579297203	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATGCCTTTTAATTTTC	NA	False	NA	-3	True	NA	NA	NA	73067437	73057522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73064013_73064142_73064548_73064668_73065454_73066804_73066971_73067140_73067215
ES.37167.22	chrX	-	3765	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	36	junction_3	98.3373014276424	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067539	73057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.23	chrX	-	4049	12	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	36	junction_3	99.0034643354121	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067526	73057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.24	chrX	-	5188	9	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	283	junction_7	38.3305931991666	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067436	73057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73067140_73067215
ES.37167.25	chrX	-	3485	15	NNC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.471026268354	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067335	73057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73058284_73058440_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.26	chrX	-	3646	14	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_7	138.228693105423	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067430	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73064013_73064142_73064548_73064662_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.27	chrX	-	4340	11	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	0	-2	intron_retention	FALSE	canonical	3	20	junction_9	139.546551372651	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067519	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73067140_73067215
ES.37167.28	chrX	-	3899	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	9	junction_9	143.169968918066	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067544	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066672_73066971_73067140_73067215
ES.37167.29	chrX	-	3981	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	90	junction_9	81.8874566435883	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067456	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.3	chrX	-	3954	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	-7	-1057	-2	0	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTAATTTTCTTT	NA	False	NA	0	True	NA	NA	NA	73067526	73057519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.30	chrX	-	3500	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	30	junction_3	99.6513448606911	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067466	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.32	chrX	-	4595	9	ISM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	-5	2	-2	-2	intron_retention	FALSE	canonical	3	311	junction_3	30.8170001784729	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067526	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790
ES.37167.33	chrX	-	3703	13	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_4	104.598803636668	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067436	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061952_73063884_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.34	chrX	-	2609	15	NNC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.253486543022	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	False	NA	-6	True	NA	NA	NA	73067519	73057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73057732_73058946_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.36	chrX	-	3826	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-7	-3	intron_retention	FALSE	canonical	1	2	junction_11	105.248873836194	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTATATGCCTTTTAAT	NA	False	NA	-7	True	NA	NA	NA	73067531	73057526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066550_73066671_73066804_73066971_73067140_73067215
ES.37167.37	chrX	-	3987	11	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	30	junction_3	104.421310085633	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTATATGCCTTTTAAT	NA	False	NA	-7	True	NA	NA	NA	73067434	73057526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.38	chrX	-	3858	13	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-63	-3	intron_retention	FALSE	canonical	3	23	junction_4	125.428155619949	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTATATGCCTTTTAAT	NA	False	NA	-7	True	NA	NA	NA	73067177	73057526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971
ES.37167.39	chrX	-	3837	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	1	-4	intron_retention	FALSE	canonical	3	9	junction_12	145.250161677898	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTATATGCCTTTTAA	NA	False	NA	-8	True	NA	NA	NA	73067436	73057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066672_73066971_73067140_73067215
ES.37167.4	chrX	-	3698	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-25	0	intron_retention	FALSE	canonical	3	7	junction_10	99.4242002614712	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTAATTTTCTTT	NA	False	NA	0	True	NA	NA	NA	73067462	73057519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066196_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.40	chrX	-	3778	14	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-28	-4	intron_retention	FALSE	canonical	0	0	junction_11	145.577568335121	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTATATGCCTTTTAA	NA	False	NA	-8	True	NA	NA	NA	73067465	73057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066671_73066804_73066971_73067140_73067215
ES.37167.41	chrX	-	3718	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	13	junction_7	105.439029248608	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTATATGCCTTTTAA	NA	False	NA	-8	True	NA	NA	NA	73067530	73057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.42	chrX	-	3969	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-5	3	intron_retention	FALSE	canonical	1	3	junction_2	116.659047370246	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCTATATGCCTTTTA	NA	False	NA	-9	True	NA	NA	NA	73067529	73057528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.43	chrX	-	3710	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	2	3	intron_retention	FALSE	canonical	3	9	junction_11	120.938316462934	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCTATATGCCTTTTA	NA	False	NA	-9	True	NA	NA	NA	73067430	73057528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066672_73066971_73067140_73067215
ES.37167.44	chrX	-	4132	13	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-2	1	intron_retention	FALSE	canonical	3	23	junction_4	128.870736269592	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACCTATATGCCTTT	NA	False	NA	-11	True	NA	NA	NA	73067434	73057530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73067140_73067215
ES.37167.46	chrX	-	6413	6	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2052	14	NA	NA	-5	1	intron_retention	FALSE	canonical	3	327	junction_5	30.7675153367964	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACCTATATGCCTTT	NA	False	NA	-11	True	NA	NA	NA	73067529	73057530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73064142_73064548_73066804_73066971
ES.37167.47	chrX	-	3732	11	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	13	junction_7	139.493404862022	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACCTATATGCCTTT	NA	False	NA	-11	True	NA	NA	NA	73067521	73057530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.5	chrX	-	2468	14	NNC	ENSMUSG00000031392.19	novel	2537	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	5	junction_1	126.640711552349	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067525	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73057732_73059011_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.50	chrX	-	3350	13	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	13	junction_7	129.937458246479	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAACCTATATGCCTTT	NA	False	NA	-11	True	NA	NA	NA	73067436	73057530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.52	chrX	-	3970	11	NNC	ENSMUSG00000031392.19	novel	2537	15	NA	NA	-40	0	intron_retention	FALSE	canonical	3	30	junction_3	105.532033051581	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067477	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73067140_73067215
ES.37167.53	chrX	-	3665	13	NNC	ENSMUSG00000031392.19	novel	2537	15	NA	NA	-16	0	intron_retention	FALSE	canonical	3	30	junction_3	97.6228570685279	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067453	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.54	chrX	-	4707	11	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-5	0	intron_retention	FALSE	canonical	3	23	junction_3	107.87868186069	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067419	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066559_73066671_73066804_73066971
ES.37167.55	chrX	-	2928	14	NNC	ENSMUSG00000031392.19	novel	2537	15	NA	NA	-4	0	intron_retention	FALSE	canonical	1	1	junction_1	128.95786202289	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067528	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73057732_73058946_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.57	chrX	-	3903	11	NIC	ENSMUSG00000031392.19	novel	2537	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	13	junction_7	108.994678769195	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067422	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.58	chrX	-	6003	9	NIC	ENSMUSG00000031392.19	novel	2441	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	327	junction_7	28.1022129911507	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067520	73057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.59	chrX	-	4132	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_9	99.4952539348262	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCAACCTATATGCCT	NA	False	NA	-13	True	NA	NA	NA	73067518	73057532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.6	chrX	-	3955	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	6	-1	intron_retention	FALSE	canonical	3	20	junction_9	101.479819896144	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067513	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.60	chrX	-	3877	13	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-1	intron_retention	FALSE	canonical	1	10	junction_5	107.339026764112	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCAACCTATATGCCT	NA	False	NA	-13	True	NA	NA	NA	73067436	73057532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73064013_73064142_73064548_73064668_73065454_73065570_73065790_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.62	chrX	-	3776	15	NNC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	7	junction_11	139.310473989809	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCAACCTATATGCCT	NA	False	NA	-13	True	NA	NA	NA	73067436	73057532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066196_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.63	chrX	-	3813	12	NNC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-25	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	127.397601077613	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCCAACCTATATGCCT	NA	False	NA	-13	True	NA	NA	NA	73067462	73057532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065572_73066035_73066268_73066454_73066559_73066671_73066804_73066971
ES.37167.66	chrX	-	5892	4	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2812	12	NA	NA	6	-2	intron_retention	FALSE	canonical	1	3	junction_1	195.204166622198	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067513	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73060304_73061735_73061973_73063505_73064668_73065790
ES.37167.67	chrX	-	3697	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	104.078031718468	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067436	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060268_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.68	chrX	-	3531	12	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2846	13	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	141.83985848324	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067526	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065870_73066078_73066271_73066454_73066559_73066671_73066804_73066971
ES.37167.69	chrX	-	3577	14	NNC	ENSMUSG00000031392.19	novel	2052	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	7	junction_10	125.303040948757	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067436	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066196_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.7	chrX	-	4041	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	283	junction_9	37.0117247449378	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067434	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066804_73066971_73067140_73067215
ES.37167.70	chrX	-	3744	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	106.254021852179	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067518	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066773_73067011_73067140_73067215
ES.37167.71	chrX	-	4515	10	Fusion	ENSMUSG00000031392.19_ENSMUSG00000076127.3	novel	2812	12	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	13	junction_6	115.400537046486	626	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCCAACCTATATGCC	NA	False	NA	-14	True	NA	NA	NA	73067455	73057533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_73059108_73060153_73060304_73060735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066559_73066671_73066804_73066971
ES.37167.73	chrX	-	3558	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	3	junction_7	136.545938747477	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATTGCCAACCTATAT	NA	False	NA	-17	True	NA	NA	NA	73067525	73057536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.74	chrX	-	4092	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	1	-6	intron_retention	FALSE	canonical	3	198	junction_10	58.2525138676506	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCATTGCCAACCTATA	NA	False	NA	-18	True	NA	NA	NA	73067518	73057537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73067140_73067215
ES.37167.75	chrX	-	3600	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	108	127	-2	-115	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGATCTTTATTCTGT	NA	False	NA	NA	False	NA	NA	NA	73067416	73057646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.76	chrX	-	3441	15	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	-19	-347	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	133.976943645433	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTGCTAAAAGTGTT	NA	False	NA	2	True	AATAAA	-36	NA	73067456	73057878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.78	chrX	-	3583	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	3	-696	3	-349	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTGTGCTAAAAGTG	NA	False	NA	0	True	AATAAA	-34	NA	73067516	73057880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.79	chrX	-	3482	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	-15	368	-15	-356	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067539	73057887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.8	chrX	-	4013	13	NIC	ENSMUSG00000031392.19	novel	2890	15	NA	NA	0	-1	intron_retention	FALSE	canonical	3	272	junction_10	42.1586784264719	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067519	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.80	chrX	-	3657	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-6	-356	intron_retention	FALSE	canonical	3	272	junction_10	42.1586784264719	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067530	73057887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.81	chrX	-	3721	11	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-5	-356	intron_retention	FALSE	canonical	3	30	junction_3	104.421310085633	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067529	73057887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066804_73066971_73067140_73067215
ES.37167.82	chrX	-	3336	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-3	-356	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	138.916170690596	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067527	73057887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73065856_73066078_73066271_73066454_73066672_73066971_73067140_73067215
ES.37167.84	chrX	-	3581	12	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-2	-356	intron_retention	FALSE	canonical	3	9	junction_10	112.171945933667	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067434	73057887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73066271_73066454_73066672_73066971_73067140_73067215
ES.37167.85	chrX	-	3855	11	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-5	-358	intron_retention	FALSE	canonical	1	9	junction_9	144.818817838014	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGAATTTGTTGTG	NA	False	NA	-9	True	AATAAA	-25	NA	73067529	73057889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063936_73064142_73064548_73064668_73065454_73065570_73065790_73066672_73066971_73067140_73067215
ES.37167.86	chrX	-	3348	13	NNC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	-8	-359	intron_retention	FALSE	canonical	1	2	junction_11	133.380069933838	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067422	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066550_73066671_73066804_73066971
ES.37167.87	chrX	-	2990	13	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	-359	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	107.613602764706	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067432	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.88	chrX	-	3197	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	-359	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	99.6513448606911	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067528	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73060847_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.89	chrX	-	4495	9	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-15	-359	intron_retention	FALSE	canonical	3	311	junction_3	33.4738704066321	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067452	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73064142_73064548_73064668_73065454_73066804_73066971_73067140_73067215
ES.37167.9	chrX	-	3355	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	2	-1	intron_retention	FALSE	canonical	1	3	junction_2	120.084085123717	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCTTTTAATTTTCTT	NA	False	NA	-1	True	NA	NA	NA	73067430	73057520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.90	chrX	-	3388	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-5	-359	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	98.3373014276424	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067529	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.91	chrX	-	3361	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	-4	-359	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	104.225283507517	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067528	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066671_73066804_73066971_73067140_73067215
ES.37167.92	chrX	-	4091	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-26	-359	intron_retention	FALSE	canonical	3	311	junction_3	29.9592315581618	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067463	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73067140_73067215
ES.37167.93	chrX	-	6963	6	NIC	ENSMUSG00000031392.19	novel	2846	13	NA	NA	1	-359	intron_retention	FALSE	canonical	3	272	junction_4	49.3290989173733	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067436	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73061973_73063505_73063572_73063933_73064142_73064548_73066559_73066671_73066804_73066971
ES.37167.95	chrX	-	3803	10	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-21	-359	intron_retention	FALSE	canonical	3	13	junction_7	114.176385095957	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067458	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065790_73066804_73066971_73067140_73067215
ES.37167.96	chrX	-	3629	13	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-4	-359	intron_retention	FALSE	canonical	0	0	junction_8	105.032898285357	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067528	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065547_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.98	chrX	-	4107	11	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	-15	-359	intron_retention	FALSE	canonical	3	272	junction_8	40.8073522787255	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067539	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37167.99	chrX	-	3505	14	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	1	-359	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	114.398348976376	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGGAATTTGTTGT	NA	False	NA	-10	True	AATAAA	-24	NA	73067436	73057890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065988_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ES.37168.1	chrX	+	117	1	FSM	ENSMUSG00000084131.2	ENSMUST00000117131.2	1214	1	1151	-54	1151	54	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGGTTTTACCACAAA	1021	False	NA	1	True	AATAAA	-12	NA	73215409	73215526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73215400_73215500
ES.37169.1	chrX	+	2527	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	-65	11	-65	-11	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCATCTACTTTATG	6411	False	NA	-5	True	AATAAA	-7	NA	73220799	73252095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
ES.37169.2	chrX	+	2423	12	NIC	ENSMUSG00000031397.12	novel	2473	13	NA	NA	-46	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	6.17646827325928	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATGCAGTTTGTGCCT	6430	False	NA	7	True	AATAAA	-19	NA	73220818	73252107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249950_73250071_73251279
ES.3717.1	chr10	-	173	1	Intergenic	novelGene_2828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATATATCTGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	108140950	108140777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108140800_108141000
ES.37170.1	chrX	-	8090	45	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	146.783383154388	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290039	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281620_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.12	chrX	-	8217	46	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	122.074346907282	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290016	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284024_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.13	chrX	-	6972	35	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	1457	0	intron_retention	FALSE	canonical	3	112	junction_18	137.728231470329	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73283452	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257
ES.37170.14	chrX	-	7968	45	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_37	172.998965446197	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290016	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.15	chrX	-	6637	37	NNC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	1219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	156.625376257024	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73283690	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73267710_73267788_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551
ES.37170.16	chrX	-	7817	44	NIC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-1648	0	intron_retention	FALSE	canonical	3	440	junction_26	89.8682468102528	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73286557	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522
ES.37170.17	chrX	-	8211	46	NNC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	146.688695315397	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290012	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280733_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283933_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.18	chrX	-	6953	39	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	76	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	157.309144354379	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTTTCATGGAAGGA	NA	False	NA	-4	True	AATAAA	-24	NA	73284833	73267067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276735_73276935_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708
ES.37170.19	chrX	-	4624	18	ISM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	14323	2	-1505	0	3prime_fragment	FALSE	canonical	3	578	junction_14	63.5516301016844	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73275681	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.2	chrX	-	8648	47	FSM	ENSMUSG00000031328.17	ENSMUST00000114299.8	8456	47	-192	0	-192	0	multi-exon	FALSE	canonical	3	4	junction_46	120.821682727122	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73293618	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293334
ES.37170.21	chrX	-	8379	47	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	150.262209384123	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290151	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283048_73283252_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.23	chrX	-	5214	23	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	505	0	intron_retention	FALSE	canonical	3	112	junction_16	162.134318360064	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73279063	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961
ES.37170.24	chrX	-	11477	43	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-13	0	intron_retention	FALSE	canonical	1	1	junction_35	148.099397047711	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290017	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283935_73284018_73284157_73284421_73284479_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.25	chrX	-	6581	38	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	873	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	129.657271431502	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73284036	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280465_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018
ES.37170.26	chrX	-	4812	10	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-50	0	intron_retention	FALSE	canonical	3	578	junction_6	75.7267667993065	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73274226	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73269181_73269807_73271364_73271457_73271581_73271691_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.3	chrX	-	8912	42	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	-13	0	intron_retention	FALSE	canonical	3	112	junction_18	132.211325620193	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290017	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281623_73281709_73281834_73282704_73282849_73282939_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.30	chrX	-	8987	45	NIC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	-47	0	intron_retention	FALSE	canonical	3	112	junction_18	128.52896255271	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290051	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.31	chrX	-	8220	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	147.910406648963	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290028	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280839_73281026_73281197_73281287_73281379_73281461_73281623_73281715_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.34	chrX	-	6282	35	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	1459	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	131.84008151327	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73283450	73267068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271232_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257
ES.37170.36	chrX	-	8176	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_39	120.827590668136	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGCTTTCATGGAAG	NA	False	NA	-6	True	AATAAA	-22	NA	73290017	73267069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284865_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.37	chrX	-	8866	44	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	440	junction_27	89.1401385742122	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGCTTTCATGGAAG	NA	False	NA	-6	True	AATAAA	-22	NA	73290017	73267069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284910_73284992_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.38	chrX	-	8112	47	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-363	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	145.779315047273	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGCTTTCATGGAAG	NA	False	NA	-6	True	AATAAA	-22	NA	73293789	73267069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279544_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293719
ES.37170.39	chrX	-	8103	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	122.327348728375	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73290032	73267070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274243_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.40	chrX	-	12069	40	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	440	junction_24	85.84433873644	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73290016	73267070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283935_73284018_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.41	chrX	-	4531	21	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	1304	-2	intron_retention	FALSE	canonical	3	112	junction_17	170.32788233287	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73278264	73267070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209
ES.37170.43	chrX	-	8246	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	121.71634703606	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73290016	73267070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278906_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.44	chrX	-	8272	47	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	149.915510231395	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTAGCTTTCATGGAA	NA	False	NA	-7	True	AATAAA	-21	NA	73290018	73267070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278408_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.45	chrX	-	7078	40	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-127	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	126.759241578055	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGTAGCTTTCATGGA	NA	False	NA	-8	True	AATAAA	-20	NA	73285036	73267071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274378_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992
ES.37170.47	chrX	-	4470	16	NIC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	2679	-4	intron_retention	FALSE	canonical	3	112	junction_15	195.642463011825	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGTAGCTTTCATGG	NA	False	NA	-9	True	AATAAA	-19	NA	73276889	73267072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754
ES.37170.48	chrX	-	5588	14	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-879	-4	intron_retention	FALSE	canonical	3	578	junction_10	57.1773944655563	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAATGTAGCTTTCATGG	NA	False	NA	-9	True	AATAAA	-19	NA	73275055	73267072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73268562_73268645_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.50	chrX	-	6679	37	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	984	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	185.144538131699	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAATGTAGCTTTCATG	NA	False	NA	-10	True	AATAAA	-18	NA	73283925	73267073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272536_73272624_73272799_73272986_73273119_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281285_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810
ES.37170.52	chrX	-	4778	27	NNC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	43	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	191.3527211861	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAATGTAGCTTTCAT	NA	False	NA	-11	True	AATAAA	-17	NA	73279525	73267074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271863_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225
ES.37170.53	chrX	-	8217	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	122.404094985159	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAATGTAGCTTTCAT	NA	False	NA	-11	True	AATAAA	-17	NA	73290012	73267074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277691_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.54	chrX	-	7725	10	NIC	ENSMUSG00000031328.17	novel	7753	45	NA	NA	2009	-6	intron_retention	FALSE	canonical	3	578	junction_7	79.1315516664232	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAATGTAGCTTTCAT	NA	False	NA	-11	True	AATAAA	-17	NA	73277559	73267074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73269181_73269807_73271364_73271457_73271581_73271691_73271845_73271926_73273116_73273431_73273573_73273661_73276945_73277527
ES.37170.58	chrX	-	3433	7	NIC	ENSMUSG00000031328.17	novel	7753	45	NA	NA	-210	-7	intron_retention	FALSE	canonical	3	637	junction_4	50.7819412346117	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGAATGTAGCTTTCA	NA	False	NA	-12	True	AATAAA	-16	NA	73271784	73267075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691
ES.37170.59	chrX	-	8233	47	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	149.915510231395	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGAATGTAGCTTTCA	NA	False	NA	-12	True	AATAAA	-16	NA	73290018	73267075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278477_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.6	chrX	-	3921	23	NNC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	1054	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	151.976346571943	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73278514	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272459_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470
ES.37170.62	chrX	-	6506	14	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-2382	-8	intron_retention	FALSE	canonical	3	578	junction_10	68.9687348769901	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73276558	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.64	chrX	-	2921	16	NNC	ENSMUSG00000031328.17	novel	7753	45	NA	NA	433	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	178.558848064783	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73273743	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272994_73273116_73273431_73273573_73273661
ES.37170.65	chrX	-	6141	34	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-1479	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	132.47575449118	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73283010	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281164_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939
ES.37170.66	chrX	-	3905	15	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-16	-8	intron_retention	FALSE	canonical	3	578	junction_11	67.6511158029766	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73274192	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.67	chrX	-	3900	23	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	1021	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	152.420931947905	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73278547	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278268_73278470
ES.37170.69	chrX	-	7806	47	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-54	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.223769403657	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73290058	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267098_73267546_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.70	chrX	-	8895	44	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	440	junction_25	88.4594855518588	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73290017	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.71	chrX	-	8488	48	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	89	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_47	148.677992031847	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73293337	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293227
ES.37170.72	chrX	-	8523	46	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	10	-8	intron_retention	FALSE	canonical	0	0	junction_8	150.052642614369	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAATGTAGCTTTC	NA	False	NA	-13	True	AATAAA	-15	NA	73290151	73267076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73271364_73271457_73271577_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.73	chrX	-	8208	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_44	121.960313318273	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290018	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286426_73286522_73286772_73289669
ES.37170.74	chrX	-	7117	39	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	130.822586616284	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290016	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280480_73283298_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.75	chrX	-	9100	49	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-4762	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	163.25691106479	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73298188	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73294127_73294206_73297157_73297330_73297691
ES.37170.76	chrX	-	7995	45	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	148.23114593083	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290016	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279220_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283895_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.77	chrX	-	7421	45	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	-13	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	142.717767127008	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290017	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267276_73269088_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.78	chrX	-	8318	45	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-14	-9	intron_retention	FALSE	canonical	0	0	junction_17	123.687211719624	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290018	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274090_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.79	chrX	-	8271	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-46	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	121.275680238389	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGTGAATGTAGCTTT	NA	False	NA	-14	True	AATAAA	-14	NA	73290050	73267077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276729_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.80	chrX	-	4859	14	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-303	-10	intron_retention	FALSE	canonical	3	578	junction_10	62.7982587479553	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGTGAATGTAGCTT	NA	False	NA	-15	True	AATAAA	-13	NA	73274479	73267078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73270583_73270803_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.81	chrX	-	3720	22	NNC	ENSMUSG00000031328.17	novel	8233	47	NA	NA	1716	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	209.524545453253	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGTGAATGTAGCTT	NA	False	NA	-15	True	AATAAA	-13	NA	73277852	73267078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271554_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768
ES.37170.83	chrX	-	6679	19	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	1681	-10	intron_retention	FALSE	canonical	3	578	junction_13	64.1034079716535	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGTGAATGTAGCTT	NA	False	NA	-15	True	AATAAA	-13	NA	73277887	73267078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73276945_73277527_73277685_73277768
ES.37170.85	chrX	-	4535	13	NIC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-302	-10	intron_retention	FALSE	canonical	3	578	junction_9	71.327686692398	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTGTGAATGTAGCTT	NA	False	NA	-15	True	AATAAA	-13	NA	73274478	73267078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73270583_73270803_73271364_73271457_73271845_73271926_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111
ES.37170.86	chrX	-	7881	47	NNC	ENSMUSG00000031328.17	novel	8312	47	NA	NA	175	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	149.956220769423	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	False	NA	-16	True	AATAAA	-12	NA	73289795	73267079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274243_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.88	chrX	-	7990	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-14	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	122.388343671555	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	False	NA	-16	True	AATAAA	-12	NA	73290018	73267079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271318_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.89	chrX	-	7743	45	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-1771	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.702428912714	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	False	NA	-16	True	AATAAA	-12	NA	73286680	73267079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268546_73268658_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522
ES.37170.9	chrX	-	8257	46	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	122.076106599404	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290032	73267066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271863_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.90	chrX	-	8246	46	NNC	ENSMUSG00000031328.17	novel	8345	46	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	122.388343671555	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	False	NA	-16	True	AATAAA	-12	NA	73290016	73267079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270978_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37170.91	chrX	-	8443	47	NNC	ENSMUSG00000031328.17	novel	8456	47	NA	NA	-345	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_46	121.123109504151	741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	False	NA	-16	True	AATAAA	-12	NA	73293771	73267079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293679
ES.37170.93	chrX	-	8113	45	ISM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	126	880	-10	467	5prime_fragment	FALSE	canonical	3	440	junction_26	83.0778628856863	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTCTCTATGTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	73290014	73267948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ES.37171.1	chrX	+	1406	6	NNC	ENSMUSG00000001964.15	novel	1338	6	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	126.848886475207	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGCCAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	73298354	73305145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73298636_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ES.37171.2	chrX	+	1361	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	93	141	19	-141	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGTTGATTCTTCCTAC	NA	False	NA	19	True	AATAAA	-14	NA	73298385	73301352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ES.37171.5	chrX	+	181	1	Intergenic	novelGene_30410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGTGTGTAG	NA	False	NA	NA	False	NA	NA	NA	73302761	73302942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73302800_73302900
ES.37172.1	chrX	-	293	2	Intergenic	novelGene_30411	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTCCGTTAGGCG	NA	False	NA	NA	False	ATTAAA	-15	NA	73314263	73313884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73314083_73314168
ES.37173.1	chrX	+	969	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-73	-97	-73	97	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGAATATTTTAAACC	NA	False	NA	109	True	NA	NA	NA	73314344	73316838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ES.37173.11	chrX	+	1321	4	ISM	ENSMUSG00000008682.14	ENSMUST00000125775.8	600	5	121	-207	121	-3	3prime_fragment	FALSE	canonical	3	9221	junction_1	230.206187772807	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTTTGTTTCTGATT	NA	False	NA	9	True	AATAAA	-19	NA	73314712	73316738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73315514_73315784_73315924_73316277_73316441_73316520
ES.37173.2	chrX	+	2263	2	NIC	ENSMUSG00000008682.14	novel	600	5	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	9593	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTTGTTTCTGATTC	NA	False	NA	10	True	AATAAA	-20	NA	73314396	73316739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73316441_73316520
ES.37173.3	chrX	+	893	6	ISM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	-20	6	-20	-6	intron_retention	FALSE	canonical	3	2920	junction_1	2571.44126123853	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTATGTTTTTGTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	73314397	73316735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277
ES.37173.4	chrX	+	747	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3908.1507739879	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314461	73316736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73314481_73314584_73314628_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ES.37173.5	chrX	+	853	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	-3	5	0	-5	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314462	73316736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ES.37173.6	chrX	+	861	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3908.1507739879	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314462	73316736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73314481_73314584_73314743_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ES.37173.8	chrX	+	2001	2	FSM	ENSMUSG00000008682.14	ENSMUST00000146584.2	699	2	-980	-322	0	-7	multi-exon	FALSE	canonical	3	9221	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTATGTTTTTGTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	73314462	73316734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73315514_73315784
ES.37173.9	chrX	+	772	7	NNC	ENSMUSG00000008682.14	novel	799	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3736.64552848615	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTTTTTGTTTCTGA	NA	False	NA	7	True	AATAAA	-17	NA	73314463	73316736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73314481_73314584_73314631_73315265_73315325_73315381_73315514_73315784_73315924_73316277_73316441_73316520
ES.37174.1	chrX	+	157	1	Intergenic	novelGene_30412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	73319245	73319402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73319200_73319400
ES.37175.1	chrX	-	229	1	Antisense	novelGene_ENSMUSG00000008682.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73315796	73315567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_73315600_73315800
ES.37176.1	chrX	-	1605	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	19	1	19	0	multi-exon	FALSE	canonical	2	3	junction_5	3.01018678652935	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGTATGCTTAATTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	73325323	73316823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
ES.37176.2	chrX	-	3892	5	NIC	ENSMUSG00000019088.15	novel	1625	8	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	6	junction_3	2.38484800354236	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATGTATGCTTAATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	73325208	73316824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73320949_73325126
ES.37177.1	chrX	+	6865	5	NNC	ENSMUSG00000009995.18	novel	826	8	NA	NA	-110	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	122.781309652569	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73325407	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73325652_73326323_73327007_73327253_73329826_73330312_73331706_73331783
ES.37177.10	chrX	+	2091	9	NNC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	-11	0	intron_retention	FALSE	canonical	3	7	junction_1	98.1542153959778	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326344	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326472_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332626_73332710_73332789_73332904
ES.37177.11	chrX	+	3007	4	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	248	junction_1	7.78888096369861	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326344	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624
ES.37177.12	chrX	+	3083	4	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	226	junction_3	16.0069429380573	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326345	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73327007_73327253_73327624_73331624_73331706_73331783
ES.37177.13	chrX	+	2574	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326345	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
ES.37177.14	chrX	+	2238	8	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	7	junction_1	96.0607800790091	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326345	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326472_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ES.37177.16	chrX	+	2261	9	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	76	junction_7	67.3163009604657	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326345	73333757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332626_73332710_73332789_73332904
ES.37177.17	chrX	+	2692	6	ISM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-10	-2	-10	-1	intron_retention	FALSE	canonical	3	226	junction_5	12.5123938556936	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326345	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783
ES.37177.18	chrX	+	2063	10	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	107.523411174578	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATACCTCTGTCTTCTGTG	NA	False	NA	5	True	AATAAA	-18	NA	73326345	73333752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331910_73332056_73332120_73332396_73332626_73332710_73332789_73332904
ES.37177.19	chrX	+	3044	4	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	249	junction_2	6.68331255192114	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTCTGTCTTCTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	73326345	73333753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73327007_73327253_73327624_73331624_73332789_73332904
ES.37177.2	chrX	+	2660	9	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	-83	0	intron_retention	FALSE	canonical	3	8	junction_1	92.6680062103421	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73325434	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73325647_73326323_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
ES.37177.20	chrX	+	1805	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	45	1	-8	-1	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326347	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ES.37177.21	chrX	+	2918	5	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_4	13.8744369255116	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326355	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783
ES.37177.22	chrX	+	2333	7	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	88.6917257821846	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326355	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326492_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
ES.37177.23	chrX	+	1734	9	NNC	ENSMUSG00000009995.18	novel	1742	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	92.6873103504466	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACCTCTGTCTTCTGTGT	NA	False	NA	6	True	AATAAA	-19	NA	73326356	73333753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332910
ES.37177.24	chrX	+	2686	5	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	13	junction_1	102.125841489801	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326356	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326492_73326877_73327007_73327253_73327624_73331624_73331706_73331783
ES.37177.25	chrX	+	2184	9	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	70	junction_7	68.8284779360985	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326356	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332789_73332904
ES.37177.26	chrX	+	2024	9	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	70	junction_6	75.5379664473435	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326357	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332321_73332710_73332789_73332904
ES.37177.27	chrX	+	2713	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	76	junction_5	65.8525288470804	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326361	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ES.37177.28	chrX	+	2802	6	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	70	junction_4	73.2420644165632	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326364	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73327007_73327253_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
ES.37177.29	chrX	+	2645	7	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	70	junction_5	68.0506347427332	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326364	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
ES.37177.3	chrX	+	2535	9	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-55	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	93.7382492635744	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73325462	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73325498_73326336_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ES.37177.30	chrX	+	2091	10	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	1	-1	intron_retention	FALSE	canonical	3	70	junction_7	77.3376435580443	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326366	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332626_73332710_73332789_73332904
ES.37177.31	chrX	+	2630	6	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	243	junction_3	8.17312669668102	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326367	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73332789_73332904
ES.37177.32	chrX	+	6513	4	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	121.114271110661	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326368	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326723_73326877_73327007_73327253_73329840_73330310
ES.37177.33	chrX	+	1603	11	NNC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	103.656210619528	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326368	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326472_73326861_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332569_73332626_73332710_73332789_73332904
ES.37177.35	chrX	+	2669	6	NIC	ENSMUSG00000009995.18	novel	826	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	70	junction_5	71.3991596589204	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATACCTCTGTCTTCTGTG	NA	False	NA	5	True	AATAAA	-18	NA	73326371	73333752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267
ES.37177.36	chrX	+	1741	10	NIC	ENSMUSG00000009995.18	novel	1742	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	91.7033596594994	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326392	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332589_73332626_73332710_73332789_73332904
ES.37177.37	chrX	+	2293	7	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	-2	0	intron_retention	FALSE	canonical	1	6	junction_3	102.255263379881	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326392	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73331624_73331706_73331783_73332120_73332267_73332789_73332904
ES.37177.39	chrX	+	1770	10	NIC	ENSMUSG00000009995.18	novel	1742	9	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	91.2507060686365	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326418	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332534_73332626_73332710_73332789_73332904
ES.37177.4	chrX	+	2657	9	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	8	junction_1	91.6630207608281	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73325500	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73325647_73326323_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ES.37177.40	chrX	+	2249	9	NIC	ENSMUSG00000009995.18	novel	1786	10	NA	NA	45	-1	intron_retention	FALSE	canonical	3	70	junction_6	76.7788015991393	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326439	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332626_73332710_73332789_73332904
ES.37177.42	chrX	+	1694	10	NNC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	-65	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	89.6831184136405	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326461	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332569_73332626_73332710_73332789_73332904
ES.37177.43	chrX	+	581	1	Genic_Genomic	ENSMUSG00000009995.18	novel	NA	NA	NA	NA	1290	392	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAGTCAGACATGATG	NA	False	NA	NA	False	AATAAA	-17	NA	73333568	73334149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_73333600_73334100
ES.37177.5	chrX	+	7041	5	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	8	junction_1	108.285213672043	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	False	NA	8	True	AATAAA	-21	NA	73325519	73333755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73325647_73326323_73326723_73326877_73327007_73327253_73332789_73332904
ES.37177.6	chrX	+	2492	9	NIC	ENSMUSG00000009995.18	novel	1742	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	8	junction_1	85.5912342182306	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73325519	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73325647_73326323_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332789_73332904
ES.37177.7	chrX	+	3000	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	33	0	intron_retention	FALSE	canonical	3	8	junction_1	100.746656961355	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73325550	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73325647_73326323_73327007_73327253_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
ES.37177.8	chrX	+	3573	6	NNC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_1	100.897968264975	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73325561	73333754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73326146_73326323_73327007_73327253_73327624_73331624_73331706_73331783_73332789_73332904
ES.37177.9	chrX	+	1795	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	-51	-2	2	-1	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTCTTCTGTGTAGG	NA	False	NA	9	True	AATAAA	-22	NA	73326304	73333756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
ES.37178.1	chrX	+	2022	10	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	13	3	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	217.423351046402	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTTCGTGTCACTCAT	NA	False	NA	17	True	AATAAA	-22	NA	73340715	73348298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340803_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.10	chrX	+	3366	6	NIC	ENSMUSG00000019087.14	novel	2157	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	13	junction_2	275.080061073136	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340752	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73344183_73345628_73345967_73346207_73346827_73346876_73346963
ES.37178.11	chrX	+	3229	8	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	672	junction_1	22.6400403836086	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGGCTTCGTGTCAC	NA	False	NA	13	True	AATAAA	-18	NA	73340752	73348294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.12	chrX	+	3025	7	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	-14	-1	6	1	intron_retention	FALSE	canonical	3	647	junction_4	31.6016877186436	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340754	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967
ES.37178.13	chrX	+	4184	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	6	-3	intron_retention	FALSE	canonical	0	0	junction_2	230.214811371901	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGGGCTTCGTGTC	NA	False	NA	11	True	AATAAA	-16	NA	73340754	73348292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73342325_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.14	chrX	+	2101	9	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	6	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	229.269355780488	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCGTGTCACTCATTTC	NA	False	NA	20	True	AATAAA	-25	NA	73340754	73348301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346925_73347193_73347402
ES.37178.15	chrX	+	4147	5	NIC	ENSMUSG00000019087.14	novel	799	8	NA	NA	8	2	intron_retention	FALSE	canonical	3	672	junction_1	26.2583320110018	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340756	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73345628_73345967
ES.37178.16	chrX	+	2028	11	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	207.903078380288	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340756	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402_73348035_73348111
ES.37178.17	chrX	+	2092	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340762	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.18	chrX	+	3905	5	NIC	ENSMUSG00000019087.14	novel	799	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	665	junction_4	15.7955689989313	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGGCTTCGTGTCAC	NA	False	NA	13	True	AATAAA	-18	NA	73340764	73348294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541
ES.37178.19	chrX	+	2148	9	NNC	ENSMUSG00000019087.14	novel	2157	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	41	junction_7	215.071354438475	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGGCTTCGTGTCAC	NA	False	NA	13	True	AATAAA	-18	NA	73340768	73348294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346055_73346827_73346876_73346963
ES.37178.2	chrX	+	2149	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	14	26	14	6	multi-exon	FALSE	canonical	3	647	junction_4	26.5934179176579	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCGTGTCACTCATTTC	NA	False	NA	20	True	AATAAA	-25	NA	73340716	73348301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.20	chrX	+	2019	9	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	226.547421912058	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340768	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344977_73345960_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.21	chrX	+	2115	11	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	276.203711053997	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTTCGTGTCACTCAT	NA	False	NA	17	True	AATAAA	-22	NA	73340778	73348298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347104_73347192_73347313_73347402
ES.37178.22	chrX	+	823	4	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	5286	597	-170	109	3prime_fragment	FALSE	canonical	3	673	junction_2	11.1455023315337	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCAGTCTCTCTTGCT	3333	False	NA	NA	False	NA	NA	NA	73345988	73347730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.23	chrX	+	1719	3	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	5578	30	122	2	3prime_fragment	FALSE	canonical	3	673	junction_1	8.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	3625	False	NA	16	True	AATAAA	-21	NA	73346280	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73346876_73346963_73347193_73347402
ES.37178.24	chrX	+	1554	2	ISM	ENSMUSG00000019087.14	ENSMUST00000144506.2	752	3	495	-676	-441	0	3prime_fragment	FALSE	canonical	3	673	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTCGTGTCACT	3998	False	NA	14	True	AATAAA	-19	NA	73346653	73348295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73346876_73346963
ES.37178.3	chrX	+	2351	9	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	18	30	18	2	intron_retention	FALSE	canonical	3	647	junction_4	28.1954672775608	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340720	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963
ES.37178.4	chrX	+	3658	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-16	1	intron_retention	FALSE	canonical	0	0	junction_2	217.433060509365	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340732	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73342325_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.5	chrX	+	1985	10	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_4	216.116223875539	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340732	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344234_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.6	chrX	+	2029	11	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	207.605298583634	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGCTTCGTGTCACTC	NA	False	NA	15	True	AATAAA	-20	NA	73340732	73348296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340800_73340898_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37178.7	chrX	+	2520	9	NNC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_6	216.579625946209	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGGGCTTCGTGTCA	NA	False	NA	12	True	AATAAA	-17	NA	73340737	73348293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346055_73346827_73346876_73346963_73347193_73347402
ES.37178.8	chrX	+	2881	8	NIC	ENSMUSG00000019087.14	novel	2157	10	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	665	junction_4	25.2804675751127	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGGGCTTCGTGTC	NA	False	NA	11	True	AATAAA	-16	NA	73340737	73348292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963
ES.37178.9	chrX	+	2668	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	3	665	junction_4	23.6748812035034	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTTCGTGTCACTCA	NA	False	NA	16	True	AATAAA	-21	NA	73340745	73348297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ES.37179.1	chrX	+	2941	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	5932	False	NA	15	True	AATAAA	-16	NA	73348587	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.10	chrX	+	3655	7	ISM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	240	-2	-4	0	intron_retention	FALSE	canonical	3	736	junction_5	44.7638867342365	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6202	False	NA	15	True	AATAAA	-16	NA	73348857	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995
ES.37179.11	chrX	+	5313	3	FSM	ENSMUSG00000015291.11	ENSMUST00000145580.8	462	3	-4	-4847	-4	1	multi-exon	FALSE	canonical	3	805	junction_2	38.5	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGGCTCTTTAGGTT	6202	False	NA	12	True	AATAAA	-13	NA	73348857	73355465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73349048_73350184_73350293_73350450
ES.37179.12	chrX	+	4724	5	ISM	ENSMUSG00000015291.11	ENSMUST00000149391.8	2746	9	-15	-4	-4	0	intron_retention	FALSE	canonical	3	771	junction_4	40.2399055664896	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6202	False	NA	15	True	AATAAA	-16	NA	73348857	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277
ES.37179.13	chrX	+	4362	7	NIC	ENSMUSG00000015291.11	novel	2746	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	771	junction_4	33.153263623494	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGGCTCTTTAGGT	6202	False	NA	11	True	AATAAA	-12	NA	73348857	73355464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73353741_73353995_73354141_73354243
ES.37179.14	chrX	+	4269	8	NIC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	748	junction_7	39.5257601354574	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6203	False	NA	13	True	AATAAA	-14	NA	73348858	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.15	chrX	+	2921	9	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	728	junction_6	49.6103567816237	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6205	False	NA	13	True	AATAAA	-14	NA	73348860	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73354141_73354243_73354299_73354392
ES.37179.16	chrX	+	3906	6	ISM	ENSMUSG00000015291.11	ENSMUST00000149391.8	2746	9	-11	-4	0	0	intron_retention	FALSE	canonical	3	736	junction_5	48.830318450733	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6206	False	NA	15	True	AATAAA	-16	NA	73348861	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681
ES.37179.17	chrX	+	3812	7	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	736	junction_5	48.9080770425499	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6206	False	NA	15	True	AATAAA	-16	NA	73348861	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73354299_73354392
ES.37179.18	chrX	+	2528	9	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_3	265.628852913233	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6208	False	NA	13	True	AATAAA	-14	NA	73348863	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.19	chrX	+	2259	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	251.601291484251	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6208	False	NA	13	True	AATAAA	-14	NA	73348863	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73354243_73354299_73354392
ES.37179.2	chrX	+	2681	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	-15	0	-15	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	5933	False	NA	15	True	AATAAA	-16	NA	73348588	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.20	chrX	+	3569	8	NIC	ENSMUSG00000015291.11	novel	2746	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	728	junction_5	44.2700433102779	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGGCTCTTTAGGT	6208	False	NA	11	True	AATAAA	-12	NA	73348863	73355464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73352782_73353568_73353741_73353995_73354141_73354243
ES.37179.21	chrX	+	2503	11	NNC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	238.869755306108	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6208	False	NA	13	True	AATAAA	-14	NA	73348863	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73349048_73350085_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.22	chrX	+	2126	10	NNC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	254.032709082808	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6208	False	NA	13	True	AATAAA	-14	NA	73348863	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350765_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.24	chrX	+	4621	6	NIC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	2	1	intron_retention	FALSE	canonical	3	748	junction_5	45.723516925101	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGGCTCTTTAGGTT	6208	False	NA	12	True	AATAAA	-13	NA	73348863	73355465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73354299_73354392
ES.37179.25	chrX	+	3532	8	NNC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	279.673132825607	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGCCTGGCTCTTTAGG	6211	False	NA	10	True	AATAAA	-11	NA	73348866	73355463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73349042_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243
ES.37179.26	chrX	+	3270	9	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	553	junction_5	92.939496447958	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGGCTCTTTAGGT	6221	False	NA	11	True	AATAAA	-12	NA	73348876	73355464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73353741_73353995_73354141_73354243
ES.37179.27	chrX	+	2744	9	FSM	ENSMUSG00000015291.11	ENSMUST00000149391.8	2746	9	4	-2	4	0	multi-exon	FALSE	canonical	3	728	junction_6	47.4656125526681	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6221	False	NA	13	True	AATAAA	-14	NA	73348876	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243
ES.37179.28	chrX	+	4349	7	NIC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	8	1	intron_retention	FALSE	canonical	3	748	junction_6	41.862539605502	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGGCTCTTTAGGTT	6225	False	NA	12	True	AATAAA	-13	NA	73348880	73355465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73353741_73353995_73354299_73354392
ES.37179.29	chrX	+	3772	7	NIC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	498	0	intron_retention	FALSE	canonical	3	736	junction_4	34.5687720348872	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCCTGGCTCTTTAGGT	7276	False	NA	11	True	AATAAA	-12	NA	73349931	73355464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73354141_73354243_73354299_73354392
ES.37179.3	chrX	+	3689	9	FSM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	9	-2	9	0	multi-exon	FALSE	canonical	3	736	junction_5	44.1572120383522	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	5971	False	NA	15	True	AATAAA	-16	NA	73348626	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.30	chrX	+	3059	6	ISM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	2090	0	-52	0	3prime_fragment	FALSE	canonical	3	736	junction_2	35.863072930244	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	8052	False	NA	13	True	AATAAA	-14	NA	73350707	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.5	chrX	+	3557	8	ISM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	233	0	-11	0	intron_retention	FALSE	canonical	3	736	junction_5	42.2972957113075	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6195	False	NA	13	True	AATAAA	-14	NA	73348850	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243
ES.37179.6	chrX	+	4628	6	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-11	0	intron_retention	FALSE	canonical	3	771	junction_4	36.1917117583571	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6195	False	NA	15	True	AATAAA	-16	NA	73348850	73355468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73354141_73354243
ES.37179.7	chrX	+	5156	4	ISM	ENSMUSG00000015291.11	ENSMUST00000149391.8	2746	9	-16	-1	-5	1	intron_retention	FALSE	canonical	3	805	junction_2	34.0032678168176	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCTGGCTCTTTAGGTT	6201	False	NA	12	True	AATAAA	-13	NA	73348856	73355465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708
ES.37179.8	chrX	+	1673	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	-4	-72	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGGTTCTGCCTTTGA	6202	False	NA	NA	False	NA	NA	NA	73348857	73354470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ES.37179.9	chrX	+	3805	7	NIC	ENSMUSG00000015291.11	novel	3696	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	736	junction_5	45.6167610521493	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	6202	False	NA	13	True	AATAAA	-14	NA	73348857	73355466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73354141_73354243
ES.3718.1	chr10	-	274	1	Intergenic	novelGene_2829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGATTCAGCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	108142621	108142347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108142300_108142600
ES.3718.2	chr10	-	164	1	Intergenic	novelGene_2830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	108142621	108142457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108142500_108142600
ES.37180.1	chrX	+	1465	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	-77	-5	-77	5	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTGCGCTTTATTTTA	122	False	NA	NA	False	AATAAA	-38	NA	73356561	73363760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.10	chrX	+	4547	5	NIC	ENSMUSG00000001962.9	novel	1918	11	NA	NA	28	-6	intron_retention	FALSE	canonical	3	832	junction_1	36.2042815147601	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCATTATAAGAACCTGC	227	False	NA	NA	False	AATAAA	-27	NA	73356666	73363749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73359179_73361035_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.11	chrX	+	1312	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	37	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.005578735448	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGCGCTTTATTTT	236	False	NA	NA	False	AATAAA	-37	NA	73356675	73363759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73356894_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.12	chrX	+	1902	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	37	-556	37	556	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTGGTCATTTTTAC	236	False	NA	NA	False	AATAAA	-9	NA	73356675	73364311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.13	chrX	+	1264	12	NIC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	38	4	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	236.531898151127	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGCGCTTTATTTT	237	False	NA	NA	False	AATAAA	-37	NA	73356676	73363759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.16	chrX	+	2032	10	NIC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	663	junction_3	77.4539289585177	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGAGTGCCTGCATTAT	248	False	NA	NA	False	AATAAA	-17	NA	73356687	73363739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.17	chrX	+	1775	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	-36	446	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.093891366737	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGGGTTCTGGGGA	256	False	NA	NA	False	NA	NA	NA	73356695	73364201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361239_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.18	chrX	+	747	9	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	-40	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289.372570184183	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTGCATTATAAGAAC	2682	False	NA	NA	False	AATAAA	-23	NA	73361033	73363745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73361109_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.19	chrX	+	641	7	ISM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	5087	-4	652	4	3prime_fragment	FALSE	canonical	3	846	junction_2	28.4351113160395	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGCGCTTTATTTT	3374	False	NA	NA	False	AATAAA	-37	NA	73361725	73363759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.20	chrX	+	713	5	ISM	ENSMUSG00000001962.9	ENSMUST00000138242.2	1918	11	5252	-5	910	5	3prime_fragment	FALSE	canonical	3	846	junction_1	31.3049516849971	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCTGCATTATAAGAAC	3632	False	NA	NA	False	AATAAA	-23	NA	73361983	73363745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73362051_73362420_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.3	chrX	+	1857	12	NIC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	747	junction_4	52.3017310839724	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGAACCTGCGCTTT	187	False	NA	NA	False	AATAAA	-32	NA	73356626	73363754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358282_73358368_73358469_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.4	chrX	+	3760	9	NIC	ENSMUSG00000001962.9	novel	1918	11	NA	NA	-9	4	intron_retention	FALSE	canonical	3	747	junction_3	57.3812632746962	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGCGCTTTATTTT	190	False	NA	NA	False	AATAAA	-37	NA	73356629	73363759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73358368_73358469_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.5	chrX	+	2358	10	NIC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	663	junction_3	79.1554183042044	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGAACCTGCGCTTT	195	False	NA	NA	False	AATAAA	-32	NA	73356634	73363754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.6	chrX	+	3869	6	NIC	ENSMUSG00000001962.9	novel	1918	11	NA	NA	-3	2	intron_retention	FALSE	canonical	1	2	junction_3	344.265943712125	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGCCTGCATTATAAG	196	False	NA	NA	False	AATAAA	-20	NA	73356635	73363742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73359179_73361035_73361113_73361242_73361310_73361973_73362868_73362997_73363109_73363565
ES.37180.8	chrX	+	2972	8	NIC	ENSMUSG00000001962.9	novel	1918	11	NA	NA	8	-3	intron_retention	FALSE	canonical	3	747	junction_4	62.3027499638758	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGAGTGCCTGCATT	207	False	NA	NA	False	AATAAA	-15	NA	73356646	73363737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358282_73358368_73358469_73359179_73361035_73361113_73361242_73362705_73362796_73362868_73362997_73363109_73363565
ES.37180.9	chrX	+	2228	9	NIC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	25	-2	intron_retention	FALSE	canonical	3	47	junction_1	271.917467947537	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAGTGCCTGCATTA	224	False	NA	NA	False	AATAAA	-16	NA	73356663	73363738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73356932_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ES.37181.1	chrX	-	244	2	Antisense	novelGene_ENSMUSG00000001962.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	73360768	73336918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_73336966_73360571
ES.37181.2	chrX	-	340	1	Intergenic	novelGene_30413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAACAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	73360767	73360427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73360400_73360800
ES.37181.3	chrX	-	3145	4	Antisense	novelGene_ENSMUSG00000106409.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACTGACCTGTACAGC	NA	False	NA	NA	False	NA	NA	NA	73372358	73360574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_73362929_73368105_73368248_73371335_73371402_73371775
ES.37182.1	chrX	+	6762	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	-8	189	-8	-183	multi-exon	TRUE	canonical	3	8	junction_6	7.59085592999894	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCATGTCTTTGTCTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	73372663	73388106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.10	chrX	+	6049	32	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	2	-188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.1957552529532	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCATGTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	73372673	73388101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372822_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378690_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.11	chrX	+	7157	31	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	4	-187	intron_retention	FALSE	canonical	0	0	junction_1	9.20410536421414	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTGCATGTCTTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	73372675	73388102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372714_73374574_73375199_73375572_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382929_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.12	chrX	+	7987	30	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	4	-186	intron_retention	FALSE	canonical	0	0	junction_2	9.17046907048116	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73372675	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372822_73374574_73375199_73375274_73375459_73375572_73376757_73377152_73377282_73377351_73377955_73378037_73378195_73378278_73378379_73378648_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.13	chrX	+	5955	33	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	-940	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.2217598778293	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTGCATGTCTTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	73375122	73388102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73375199_73375342_73375459_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378690_73378960_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382929_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.14	chrX	+	5647	29	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	-201	-1	intron_retention	FALSE	canonical	0	0	junction_2	9.022293816668	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTGTTTCCACTCAGA	NA	False	NA	NA	False	NA	NA	NA	73377150	73388294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73377282_73377351_73377453_73377645_73377706_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.15	chrX	+	4819	24	NIC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	409	-188	intron_retention	FALSE	canonical	3	13	junction_1	6.95271635048371	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCATGTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	73378340	73388101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73378379_73378648_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.16	chrX	+	5010	17	NIC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	201	-188	intron_retention	FALSE	canonical	3	13	junction_4	5.90517516674992	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCATGTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	73379038	73388101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73379105_73379375_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.17	chrX	+	4322	23	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	202	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	8.39335136327784	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73379039	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385285_73385526_73385678_73387052
ES.37182.18	chrX	+	3502	16	ISM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	8302	192	-898	-186	3prime_fragment	FALSE	canonical	3	16	junction_7	5.90442395346254	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73380973	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.19	chrX	+	3148	8	NIC	ENSMUSG00000031398.14	novel	5561	29	NA	NA	132	-186	intron_retention	FALSE	canonical	3	26	junction_6	2.81395937194174	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73382086	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73382553_73382675_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.2	chrX	+	6934	34	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	-1	-186	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	10.0933203052418	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73372670	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372822_73374574_73375199_73375274_73375459_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378065_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380488_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.3	chrX	+	6093	33	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	-1	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	8.3703345213916	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGCCTCACAGACCTCT	NA	False	NA	NA	False	AATATA	-18	NA	73372670	73387514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385285_73385526_73385678_73387052
ES.37182.4	chrX	+	6519	28	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	-1	-2099	intron_retention	FALSE	canonical	0	0	junction_1	8.18912256563924	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCCAAACACTGATGGCA	NA	False	NA	NA	False	AAAAAG	-10	NA	73372670	73385452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372714_73374574_73375199_73375572_73376757_73377152_73377282_73377351_73377955_73378037_73378195_73378278_73378379_73378648_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141
ES.37182.5	chrX	+	6836	33	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	8.38985389845973	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTGTTTCCACTCAGA	NA	False	NA	NA	False	NA	NA	NA	73372673	73388294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381894_73382087_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.6	chrX	+	6018	32	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	2	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.48601714544084	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCATGTCTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	73372673	73388104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372714_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.7	chrX	+	6641	33	NNC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	2	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.39247244559075	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTCTTTGTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	73372673	73388103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73372714_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.8	chrX	+	6437	31	NIC	ENSMUSG00000031398.14	novel	6943	33	NA	NA	2	-34	intron_retention	FALSE	canonical	3	8	junction_6	7.71837634048336	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTCACAGACCTCTTCT	NA	False	NA	NA	False	AATATA	-21	NA	73372673	73387517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73379105_73379375_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37182.9	chrX	+	6939	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	2	2	2	-2	multi-exon	FALSE	canonical	3	8	junction_6	7.59085592999894	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACTGTTTCCACTCAG	NA	False	NA	NA	False	NA	NA	NA	73372673	73388293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ES.37183.1	chrX	-	1782	1	Antisense	novelGene_ENSMUSG00000031398.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCCAGATA	NA	False	NA	NA	False	NA	NA	NA	73381063	73379281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_73379300_73381100
ES.37184.1	chrX	-	160	1	Intergenic	novelGene_30414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAAATCTT	9941	False	NA	NA	False	NA	NA	NA	73391776	73391616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73391600_73391800
ES.37185.1	chrX	-	178	1	Intergenic	novelGene_30415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACATTTCCCAAAAAAA	8259	False	NA	NA	False	NA	NA	NA	73393458	73393280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73393300_73393500
ES.37186.1	chrX	+	360	1	Antisense	novelGene_ENSMUSG00000015289.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73395304	73395664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_73395300_73395700
ES.37187.1	chrX	-	2966	2	FSM	ENSMUSG00000015289.5	ENSMUST00000114153.2	1997	2	-11	-958	-11	958	multi-exon	FALSE	canonical	3	1433	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCTACTAATATTTTT	4506	False	NA	NA	False	AATAAA	-16	NA	73397211	73393923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73396609_73396930
ES.37187.2	chrX	-	847	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	-74	-12	-74	12	multi-exon	FALSE	canonical	3	1433	junction_2	31	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTTTGGTTTTTAT	4419	False	NA	-6	True	AATAAA	-42	NA	73397298	73395754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73396105_73396479_73396609_73396930
ES.37187.3	chrX	-	775	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	-29	0	-10	0	multi-exon	FALSE	canonical	3	109	junction_1	662	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4507	False	NA	-19	True	AATAAA	-29	NA	73397210	73395767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73396105_73396450_73396609_73396930
ES.37187.4	chrX	-	711	3	NNC	ENSMUSG00000015289.5	novel	746	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	696.5	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4501	False	NA	-19	True	AATAAA	-29	NA	73397216	73395767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73396105_73396520_73396609_73396930
ES.37187.5	chrX	-	710	3	NNC	ENSMUSG00000015289.5	novel	761	3	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	704	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCAGCCTCTAAATT	4518	False	NA	-21	True	AATAAA	-27	NA	73397199	73395769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73396105_73396502_73396609_73396930
ES.37187.6	chrX	-	1114	2	FSM	ENSMUSG00000015289.5	ENSMUST00000114153.2	1997	2	-13	896	11	-10	multi-exon	FALSE	canonical	3	1433	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTTATTTTCAGCC	4504	False	NA	-29	True	AATAAA	-19	NA	73397213	73395777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73396609_73396930
ES.37188.1	chrX	-	2073	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-11	10263	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	731.195724481482	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCATAGGTGTTTGTCC	NA	False	NA	NA	False	AATAAA	-21	NA	73412130	73399060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73400570_73411052_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.10	chrX	-	2663	2	FSM	ENSMUSG00000015290.16	ENSMUST00000126191.2	614	2	-25	-2024	20	0	multi-exon	FALSE	canonical	3	1799	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412144	73409324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411865_73412021
ES.37188.11	chrX	-	1832	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	734.211992547112	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412142	73409324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73410646_73411117_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.12	chrX	-	2535	3	NIC	ENSMUSG00000015290.16	novel	2220	3	NA	NA	-11	0	intron_retention	FALSE	canonical	3	1598	junction_1	100.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412130	73409324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73411193_73411306_73411865_73412021
ES.37188.13	chrX	-	2362	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	14	-2	intron_retention	FALSE	canonical	3	1665	junction_1	67	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAACTGAATCCTGTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	73412088	73409326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73411516_73411758_73411865_73412021
ES.37188.14	chrX	-	645	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	123	1674	8	73	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTGATAATAATAGCTGG	NA	False	NA	8	True	ATTAAA	-27	NA	73412156	73410997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.15	chrX	-	399	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-10	63	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	890	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGGCTCATAGTGATAA	NA	False	NA	-2	True	ATTAAA	-17	NA	73412129	73411007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73411193_73411758_73411865_73412021
ES.37188.16	chrX	-	691	4	FSM	ENSMUSG00000015290.16	ENSMUST00000015434.15	782	4	-39	130	-2	63	multi-exon	FALSE	canonical	0	0	junction_2	804.874455358653	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGGCTCATAGTGATAA	NA	False	NA	-2	True	ATTAAA	-17	NA	73412111	73411007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411193_73411306_73411617_73411758_73411865_73412021
ES.37188.17	chrX	-	525	3	ISM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	161	1870	1	-123	5prime_fragment	FALSE	canonical	3	1665	junction_1	67	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTATGACAGGTCCTTGA	NA	False	NA	NA	False	AATACA	-19	NA	73412118	73411193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73411516_73411758_73411865_73412021
ES.37188.2	chrX	-	1430	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-18	9613	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	731.195724481482	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	73412137	73399710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73400570_73411052_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.3	chrX	-	2450	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	147	-155	-13	155	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTGCAGATGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	73412132	73409168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.4	chrX	-	2829	1	Genic_Genomic	ENSMUSG00000015290.16	novel	NA	NA	NA	NA	20	8	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTAATATTTGGGTT	NA	False	NA	2	True	AATAAA	-28	NA	73412144	73409315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_73409300_73412100
ES.37188.5	chrX	-	2326	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	122	-6	7	6	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGTGTAATATTTGGG	NA	False	NA	0	True	AATAAA	-26	NA	73412157	73409317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.6	chrX	-	1705	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	734.211992547112	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAATCCTGTGTAATAT	NA	False	NA	-5	True	AATAAA	-21	NA	73412133	73409322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73410461_73411052_73411193_73411306_73411516_73411758_73411865_73412021
ES.37188.7	chrX	-	2153	3	FSM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	67	0	5	0	multi-exon	FALSE	canonical	3	33	junction_2	782.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412097	73409324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73411193_73411306_73411516_73412021
ES.37188.8	chrX	-	2085	3	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	890	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412132	73409324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73411193_73411758_73411865_73412021
ES.37189.1	chrX	-	1999	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	24	0	-20	0	multi-exon	FALSE	canonical	3	11	junction_2	8.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416931	73412822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73414618_73416219_73416289_73416796
ES.3719.1	chr10	-	2317	1	Antisense	novelGene_ENSMUSG00000035873.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGACTGCGAGCCTA	NA	False	NA	NA	False	NA	NA	NA	108169134	108166817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_108166800_108169100
ES.37190.1	chrX	+	158	1	Intergenic	novelGene_30416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCTCAGTGAGTG	5428	False	NA	NA	False	ATTAAA	-33	NA	73417037	73417195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73417000_73417200
ES.37191.1	chrX	-	5911	8	ISM	ENSMUSG00000031399.16	ENSMUST00000122894.8	814	9	53	-4799	-20	3096	intron_retention	FALSE	canonical	3	109	junction_5	16	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCTCTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	73436808	73425228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ES.37191.10	chrX	-	1658	11	NNC	ENSMUSG00000031399.16	novel	814	9	NA	NA	-2	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.8283375555967	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGTATTCAGATGT	NA	False	NA	-31	True	AATAAA	-18	NA	73436863	73428349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73429042_73429356_73429452_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431413_73434079_73434104_73434596_73434711_73436280_73436354_73436704
ES.37191.11	chrX	-	1918	10	NNC	ENSMUSG00000031399.16	novel	1586	10	NA	NA	-35	15	intron_retention	FALSE	canonical	2	3	junction_8	53.6658615076477	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAAGTGTATTCAGAT	NA	False	NA	-33	True	AATAAA	-16	NA	73436823	73428351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73434919_73435021_73436280
ES.37191.2	chrX	-	1898	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	11	-10	-6	10	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGTGTTGTCCCGTG	NA	False	NA	4	True	AATAAA	-30	NA	73436867	73428314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ES.37191.3	chrX	-	1436	10	NIC	ENSMUSG00000031399.16	novel	814	9	NA	NA	21	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	35.9828491381487	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGAGTCAAGGGTGGT	NA	False	NA	-7	True	AATAAA	-42	NA	73436767	73428325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
ES.37191.4	chrX	-	1485	9	NNC	ENSMUSG00000031399.16	novel	814	9	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.9361601803465	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGAGTCAAGGGTGGT	NA	False	NA	-7	True	AATAAA	-42	NA	73436824	73428325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431370_73434592_73434711_73436280_73436354_73436704
ES.37191.5	chrX	-	2163	7	NIC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	-37	-4	intron_retention	FALSE	canonical	3	109	junction_1	12.4721912892465	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGGAGAGTCAAGGGT	NA	False	NA	-10	True	AATAAA	-39	NA	73436746	73428328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73429042_73430027_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ES.37191.6	chrX	-	5080	7	NIC	ENSMUSG00000031399.16	novel	1899	9	NA	NA	11	-6	intron_retention	FALSE	canonical	3	109	junction_1	15.1152976226809	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGTGGAGAGTCAAGG	NA	False	NA	-12	True	AATAAA	-37	NA	73436850	73428330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73434711_73436280
ES.37191.7	chrX	-	2624	8	NIC	ENSMUSG00000031399.16	novel	814	9	NA	NA	5	-19	intron_retention	FALSE	canonical	3	22	junction_7	40.494897637775	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTCAGATGTCCTCAG	NA	False	NA	-25	True	AATAAA	-24	NA	73436856	73428343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73430155_73430237_73430323_73430639_73430691_73431043_73431358_73434079_73434104_73434596_73434711_73436280_73436354_73436704
ES.37191.9	chrX	-	3006	6	FSM	ENSMUSG00000031399.16	ENSMUST00000114138.8	507	6	-331	-2168	-15	17	multi-exon	FALSE	canonical	3	109	junction_3	12.8156154748806	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGTATTCAGATGT	NA	False	NA	-31	True	AATAAA	-18	NA	73436624	73428349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ES.37192.1	chrX	+	4537	10	FSM	ENSMUSG00000004221.17	ENSMUST00000164101.8	6788	10	1	2250	1	8	multi-exon	FALSE	canonical	0	0	junction_1	36.7184819073481	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCCTCCCTTGTTGG	NA	False	NA	9	True	AATAAA	-23	NA	73436897	73495134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73437012_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.11	chrX	+	2563	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	17	752	-16	428	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAGGTCTAAATCCTTCC	NA	False	NA	4	True	AATAAA	-16	NA	73473293	73493140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.12	chrX	+	6824	12	NNC	ENSMUSG00000004221.17	novel	3332	10	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.591705458079	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGTTAAATTTAATT	NA	False	NA	NA	False	TATAAA	-15	NA	73473303	73497447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73475103_73475273_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822_73496140_73496344
ES.37192.14	chrX	+	3302	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	33	-3	0	3	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTTTGGGCTTATAT	NA	False	NA	6	True	NA	NA	NA	73473309	73493895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.15	chrX	+	2820	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	33	479	0	-479	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCTTATGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	73473309	73493413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.16	chrX	+	4707	11	NNC	ENSMUSG00000004221.17	novel	4530	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.6688077356964	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGTCCTCCCTTGT	NA	False	NA	6	True	AATAAA	-20	NA	73473309	73495131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73475103_73475273_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.17	chrX	+	6426	10	NNC	ENSMUSG00000004221.17	novel	4530	10	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	37.1835620126773	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACTCTGTCCTCCCTTG	NA	False	NA	5	True	AATAAA	-19	NA	73473309	73495130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487765_73489819_73491527_73491822
ES.37192.18	chrX	+	6640	11	NNC	ENSMUSG00000004221.17	novel	4530	10	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	43.2019675477865	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGTTAAATTTAATTT	NA	False	NA	NA	False	TATAAA	-16	NA	73473316	73497448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822_73496140_73496344
ES.37192.2	chrX	+	3411	11	NIC	ENSMUSG00000004221.17	novel	6788	10	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	43.5340096935718	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTTTGGGCTTATAT	NA	False	NA	6	True	NA	NA	NA	73436897	73493895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73437012_73471367_73471481_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.20	chrX	+	6847	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	40	-3555	7	-13	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTGTTAAATTTAATT	NA	False	NA	NA	False	TATAAA	-15	NA	73473316	73497447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.21	chrX	+	5339	9	NIC	ENSMUSG00000004221.17	novel	4530	10	NA	NA	8	2	intron_retention	FALSE	canonical	3	18	junction_3	33.754397861612	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCACTCTGTCCTCCCT	NA	False	NA	3	True	AATAAA	-17	NA	73473317	73495128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.22	chrX	+	2675	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	54	603	3	577	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAATCCTGAGCTGG	NA	False	NA	NA	False	TATAAA	-10	NA	73473330	73493289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.23	chrX	+	9571	11	NNC	ENSMUSG00000004221.17	novel	3332	10	NA	NA	11	2938	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	35.3247788386566	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTCTGAGCAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	73473338	73500398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822_73496140_73496344
ES.37192.24	chrX	+	6973	11	NNC	ENSMUSG00000004221.17	novel	3332	10	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.6688077356964	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATTTTATTAATTTTTA	NA	False	NA	NA	False	TATAAA	-28	NA	73473344	73497460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73473428_73475131_73475273_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.3	chrX	+	5638	8	NIC	ENSMUSG00000004221.17	novel	6788	10	NA	NA	10	7	intron_retention	FALSE	canonical	0	0	junction_1	41.3052351280027	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCCTCCCTTGTTG	NA	False	NA	8	True	AATAAA	-22	NA	73436906	73495133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73437012_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73483557_73486950_73487095_73487377_73487521_73491464
ES.37192.4	chrX	+	3212	1	Antisense	novelGene_ENSMUSG00000031400.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACCAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	73458670	73461882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_73458700_73461900
ES.37192.5	chrX	+	4523	10	NIC	ENSMUSG00000004221.17	novel	6918	11	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	36.7184819073481	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACTCTGTCCTCCCTTG	NA	False	NA	5	True	AATAAA	-19	NA	73468217	73495130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73468322_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.6	chrX	+	4621	11	NIC	ENSMUSG00000004221.17	novel	2222	11	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	48.9023516816932	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGTCCTCCCTTGT	NA	False	NA	6	True	AATAAA	-20	NA	73468230	73495131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_73468322_73471367_73471481_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.7	chrX	+	3345	11	FSM	ENSMUSG00000004221.17	ENSMUST00000114128.8	1867	11	64	-1542	30	3	multi-exon	FALSE	canonical	0	0	junction_1	44.339711320666	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGTTTGGGCTTATAT	NA	False	NA	6	True	NA	NA	NA	73468273	73493895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73468322_73471367_73471481_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37192.9	chrX	+	4566	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	5	-1239	5	5	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCTGTCCTCCCTTGT	NA	False	NA	6	True	AATAAA	-20	NA	73473281	73495131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ES.37193.1	chrX	-	153	1	Intergenic	novelGene_30417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	73439479	73439326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_73439300_73439500
ES.37194.1	chrX	-	5651	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	239	-3238	-75	3238	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGATTATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	73472561	73449850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.10	chrX	-	2315	13	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	-67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	87.7943857354596	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	-9	True	ATTAAA	-15	NA	73472553	73453091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471744_73471786_73472428
ES.37194.12	chrX	-	3945	11	NIC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	286	junction_6	15.4857999470483	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACCTGTCTCCTTGTTC	NA	False	NA	-11	True	ATTAAA	-13	NA	73472485	73453093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.13	chrX	-	1931	11	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	94.0749169545209	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACCTGTCTCCTTGTTC	NA	False	NA	-11	True	ATTAAA	-13	NA	73472487	73453093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457519_73471744_73471786_73472428
ES.37194.2	chrX	-	7047	11	NIC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	1	3231	intron_retention	FALSE	canonical	3	286	junction_5	15.9439643752738	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTGCCTTGATTATG	NA	False	NA	NA	False	NA	NA	NA	73472485	73449857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73453904_73454002_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.3	chrX	-	3922	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	316	-1586	-2	1586	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGGTGTGTGTATGTA	NA	False	NA	NA	False	NA	NA	NA	73472484	73451502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.5	chrX	-	2417	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	234	1	-80	-1	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTCTCCTTGTTCTTTT	NA	False	NA	-7	True	ATTAAA	-17	NA	73472566	73453089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.7	chrX	-	2173	12	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	121.752696102651	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTCTCCTTGTTCTTT	NA	False	NA	-8	True	ATTAAA	-16	NA	73472524	73453090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73458513_73458640_73458721_73458760_73471657_73471786_73472428
ES.37194.8	chrX	-	2428	12	NIC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	267	junction_7	20.7838144273076	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTCTCCTTGTTCTTT	NA	False	NA	-8	True	ATTAAA	-16	NA	73472485	73453090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_73453904_73454002_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ES.37194.9	chrX	-	2312	13	NNC	ENSMUSG00000031400.11	novel	2652	13	NA	NA	547	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	88.4242849372652	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTGTCTCCTTGTTCTT	NA	False	NA	-9	True	ATTAAA	-15	NA	73471908	73453091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73471873
ES.37195.1	chrX	-	157	1	Antisense	novelGene_ENSMUSG00000004221.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	73496341	73496184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_73496200_73496300
ES.37196.1	chrX	-	912	3	FSM	ENSMUSG00000079536.2	ENSMUST00000114125.2	627	3	-138	-147	-138	147	multi-exon	FALSE	canonical	3	15	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAAAAATAGCAA	NA	False	NA	NA	False	TTTAAA	-9	NA	73525143	73523745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73524038_73524213_73524343_73524652
ES.37196.2	chrX	-	837	3	NNC	ENSMUSG00000079536.2	novel	627	3	NA	NA	-147	147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAAAAATAGCAA	NA	False	NA	NA	False	TTTAAA	-9	NA	73525152	73523745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_73523967_73524226_73524343_73524652
ES.37197.1	chrX	+	6089	1	Intergenic	novelGene_30418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCATAAGTTCTGT	8169	False	NA	NA	False	NA	NA	NA	73578579	73584668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73578600_73584700
ES.37198.1	chrX	+	959	2	ISM	ENSMUSG00000083847.2	ENSMUST00000121687.2	658	8	7811	-833	7811	833	3prime_fragment	FALSE	canonical	3	314	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGGATGAGTCATT	9666	False	NA	NA	False	AATAAA	-17	NA	73747463	73748515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_73747533_73747625
ES.37199.1	chrX	-	227	1	FSM	ENSMUSG00000080777.2	ENSMUST00000122392.2	300	1	299	-226	299	226	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCATGGATTTCCGTT	NA	False	NA	NA	False	TATAAA	-16	NA	73757108	73756881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_73756900_73757100
ES.372.1	chr1	+	159	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAAGTAA	NA	False	NA	NA	False	NA	NA	NA	42828414	42828573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_42828400_42828600
ES.3720.1	chr10	-	4677	1	Intergenic	novelGene_2833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108237915	108233238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108233200_108237900
ES.3720.2	chr10	-	179	1	Intergenic	novelGene_2834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGTGTACTACTC	NA	False	NA	NA	False	NA	NA	NA	108236171	108235992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108236000_108236200
ES.37200.1	chrX	+	3187	7	NNC	ENSMUSG00000084066.2	novel	646	7	NA	NA	-915	300	intron_retention	FALSE	canonical	0	0	junction_2	51.562260100452	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGGATGAGT	4368	False	NA	NA	False	AATAAA	-13	NA	73769919	73778047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73770018_73770333_73770417_73770803_73770932_73771611_73771681_73773318_73775663_73777464_73777561_73777678
ES.37201.1	chrX	-	1766	3	Genic_Genomic	ENSMUSG00000082910.2	novel	138	1	NA	NA	-1126	1018	multi-exon	FALSE	canonical	0	0	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGCTTTTCTTAGTTTT	4445	False	NA	NA	False	ATTAAA	-19	NA	73820554	73818272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_73819430_73819520_73819735_73820159
ES.37201.2	chrX	-	905	3	Genic_Genomic	ENSMUSG00000082910.2	novel	138	1	NA	NA	-1176	192	multi-exon	FALSE	canonical	3	12	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTTTGTTTGTAT	4395	False	NA	NA	False	AATACA	-15	NA	73820604	73819098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_73819430_73819605_73819735_73820159
ES.37202.1	chrX	+	626	2	Intergenic	novelGene_30419	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGGATGAGTCATT	NA	False	NA	25	True	AATAAA	-17	NA	73964133	73995954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_73964640_73995834
ES.37202.2	chrX	+	1210	9	NNC	ENSMUSG00000081357.2	novel	648	7	NA	NA	-936	304	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	23.8507730482683	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGGATGAGTCATT	NA	False	NA	25	True	AATAAA	-17	NA	73987632	73995954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73987777_73988067_73988151_73988537_73988666_73989350_73989420_73991236_73991355_73992188_73992289_73993476_73993576_73995367_73995464_73995581
ES.37202.3	chrX	+	3363	7	NNC	ENSMUSG00000081357.2	novel	648	7	NA	NA	-913	300	intron_retention	FALSE	canonical	3	13	junction_5	23.0771652408946	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTTGGGATGAGT	NA	False	NA	21	True	AATAAA	-13	NA	73987655	73995950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_73987753_73988067_73988666_73989350_73991355_73992188_73992289_73993476_73993576_73995367_73995464_73995581
ES.37203.1	chrX	-	1638	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	-11	-877	-11	-62	multi-exon	FALSE	canonical	3	11	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTTTGTTGTTGTTC	2168	False	NA	NA	False	TATAAA	-18	NA	74012742	74010510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74011592_74011767_74011897_74012314
ES.37204.1	chrX	+	231	1	Intergenic	novelGene_30420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGTATATTTTTGT	NA	False	NA	NA	False	AGTAAA	-42	NA	74099535	74099766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74099500_74099800
ES.37205.1	chrX	+	186	1	Intergenic	novelGene_30421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGGTCAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	74100550	74100736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74100600_74100700
ES.37206.1	chrX	+	175	1	Intergenic	novelGene_30423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	74109701	74109876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74109700_74109900
ES.37207.1	chrX	-	2159	11	NNC	ENSMUSG00000032750.14	novel	2153	10	NA	NA	10	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.68819430161341	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGATTGTTTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	74128501	74032070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74032125_74032164_74032443_74033659_74033777_74043570_74043707_74045416_74045499_74047929_74048138_74048921_74048978_74068383_74068863_74069594_74069812_74076776_74077081_74128273
ES.37207.2	chrX	-	1178	7	NNC	ENSMUSG00000032750.14	novel	2153	10	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.95078331845327	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTCTCACAAGTTTACAC	NA	False	NA	NA	False	NA	NA	NA	74128518	74032125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74032443_74033642_74033777_74043570_74043707_74045416_74045499_74047929_74048138_74048921_74048978_74128273
ES.37207.3	chrX	-	2207	10	NNC	ENSMUSG00000032750.14	novel	2153	10	NA	NA	-36	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5475986974649	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTCTCACAAGTTTACAC	NA	False	NA	NA	False	NA	NA	NA	74128547	74032125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74032443_74033642_74033777_74043570_74043707_74045416_74045499_74047929_74048138_74048921_74048978_74068383_74068863_74069594_74069812_74076776_74077081_74128273
ES.37207.4	chrX	-	2050	10	FSM	ENSMUSG00000032750.14	ENSMUST00000037374.11	2153	10	0	103	0	80	multi-exon	FALSE	canonical	1	1	junction_2	1.5475986974649	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTTCTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	74128511	74032229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74032443_74033659_74033777_74043570_74043707_74045416_74045499_74047929_74048138_74048921_74048978_74068383_74068863_74069594_74069812_74076776_74077081_74128273
ES.37207.5	chrX	-	210	1	Intergenic	novelGene_30422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTGCACAGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74109082	74108872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74108900_74109100
ES.37207.6	chrX	-	174	1	Intergenic	novelGene_30424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	74126641	74126467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74126500_74126600
ES.37208.1	chrX	+	2819	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	-8	-7	-8	7	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTCCTTTGGCTAC	NA	False	NA	41	True	ATTAAA	-28	NA	74139451	74153390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.10	chrX	+	2668	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	42	-159	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	1043.53796758715	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139501	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.11	chrX	+	3290	14	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	47	-1	intron_retention	FALSE	canonical	0	0	junction_8	995.029213689063	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139506	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146184_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.12	chrX	+	2725	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	61	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	880.936141389999	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139520	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.13	chrX	+	2733	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-81	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	718.545430515208	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139577	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.14	chrX	+	3577	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-44	-159	intron_retention	FALSE	canonical	3	1536	junction_7	514.264496365656	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139614	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.15	chrX	+	2562	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-34	-159	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139624	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.17	chrX	+	2711	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-21	3	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGCTTTTCCTTTGG	NA	False	NA	37	True	ATTAAA	-24	NA	74139637	74153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.18	chrX	+	2748	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	929.226115288057	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139644	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.19	chrX	+	2622	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	720.948797327069	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139652	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146184_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.2	chrX	+	2641	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	703.019854311068	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGAATTTGCTTTTC	NA	False	NA	31	True	ATTAAA	-18	NA	74139472	74153380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139513_74139659_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.20	chrX	+	2578	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	880.515204587748	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCTATTTTGAATTTG	NA	False	NA	25	True	ATTAAA	-12	NA	74139659	74153374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144606_74144727_74146033_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.21	chrX	+	4884	12	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	1536	junction_7	508.242247179612	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139659	74153383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.22	chrX	+	2022	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	7	-624	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	718.545430515208	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAGAGAAAAAATGTAAT	NA	False	NA	NA	False	ATTAAA	-30	NA	74139665	74152759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.24	chrX	+	4699	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	206	-2101	7	2101	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGACCTAAAAGGTGTGG	NA	False	NA	NA	False	AATAAA	-45	NA	74139665	74155484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.25	chrX	+	2487	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	7	-159	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	718.545430515208	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139665	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.26	chrX	+	4547	14	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	13	2071	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	742.787059246872	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTTGGCCTTGGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	74139671	74155454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142558_74144093_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.27	chrX	+	2635	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	16	105413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	1012.43784116469	1794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74139674	74258796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258761
ES.37208.28	chrX	+	2581	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	725.934021851596	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTTGAATTTGCTTTT	NA	False	NA	30	True	ATTAAA	-17	NA	74139675	74153379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140512_74140895_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.29	chrX	+	3016	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-16	-159	intron_retention	FALSE	canonical	3	151	junction_1	697.349135173	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139675	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.3	chrX	+	2622	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	23	159	23	-159	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139482	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.30	chrX	+	2968	11	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_4	830.281572720966	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139676	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.31	chrX	+	3179	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-15	5	intron_retention	FALSE	canonical	3	151	junction_1	697.349135173	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTTCCTTTGGCT	NA	False	NA	39	True	ATTAAA	-26	NA	74139676	74153388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.32	chrX	+	2441	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	2	66	junction_8	733.882566424476	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139676	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.34	chrX	+	2545	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-15	-5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	875.581253004108	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTGAATTTGCTTT	NA	False	NA	29	True	ATTAAA	-16	NA	74139676	74153378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.35	chrX	+	3106	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	147	junction_5	863.32085542299	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139679	74153383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.36	chrX	+	3222	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	147	junction_4	736.804983244097	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139680	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.37	chrX	+	2709	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	829.262580047277	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139680	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140193_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.39	chrX	+	1534	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	224	1046	-8	455	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGTGGTAGAAGAGAT	NA	False	NA	NA	False	AAAAAG	-16	NA	74139683	74152337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.4	chrX	+	2460	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	23	-256	combination_of_known_junctions	FALSE	canonical	3	147	junction_5	713.258221081838	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74139482	74153127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.40	chrX	+	2348	13	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	783.575188727214	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139685	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74142417_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.42	chrX	+	2607	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	105413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	703.927351049492	1794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74139685	74258796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258761
ES.37208.43	chrX	+	4737	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-5	5	intron_retention	FALSE	canonical	3	1552	junction_5	502.272502399511	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTTTTCCTTTGGCT	NA	False	NA	39	True	ATTAAA	-26	NA	74139686	74153388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.44	chrX	+	2886	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	1	-159	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	830.136149475896	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139692	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74139846_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.45	chrX	+	2538	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	105417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	855.865798654276	1794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	74139693	74258800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258761
ES.37208.46	chrX	+	3591	12	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	147	junction_3	763.167854114492	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139693	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.47	chrX	+	2626	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	959.439972705166	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139698	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140193_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.48	chrX	+	1467	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-6	29	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	898.355194539195	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGAACCATGGGTGT	NA	False	NA	79	True	NA	NA	NA	74139698	74151911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784
ES.37208.49	chrX	+	3197	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	39	junction_2	852.849904252603	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139699	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140321_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.5	chrX	+	2637	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	921.590755614081	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139492	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.50	chrX	+	2376	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-5	-159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	728.454080185413	1787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74139699	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142131_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.51	chrX	+	3746	14	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-4	-1	intron_retention	TRUE	canonical	0	0	junction_10	675.920796452456	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139700	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148514_74149027_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.52	chrX	+	2535	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_8	724.010306190035	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139700	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144700_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.53	chrX	+	2473	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	965.278673942063	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139700	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144700_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.54	chrX	+	1871	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-1	-624	combination_of_known_junctions	FALSE	canonical	3	147	junction_5	713.258221081838	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAGAGAAAAAATGTAAT	NA	False	NA	NA	False	ATTAAA	-30	NA	74139703	74152759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.55	chrX	+	2482	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	749.332689324269	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTATTTTGAATTTGC	NA	False	NA	26	True	ATTAAA	-13	NA	74139705	74153375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.56	chrX	+	2622	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	1043.53796758715	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139705	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.57	chrX	+	2424	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	728.454080185413	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTATTTTGAATTTGC	NA	False	NA	26	True	ATTAAA	-13	NA	74139708	74153375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142086_74142417_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.58	chrX	+	2962	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	960.210680538604	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139708	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74139734_74139846_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.59	chrX	+	4353	13	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	1536	junction_7	524.057162647571	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139708	74153383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140508_74140888_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.6	chrX	+	2781	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	42	2	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	947.11987690286	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTTGCTTTTCCTTTG	NA	False	NA	36	True	ATTAAA	-23	NA	74139501	74153385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.60	chrX	+	3110	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	2	105413	intron_retention	FALSE	non_canonical	0	0	junction_10	1009.45999910641	1794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74139708	74258796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149383_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258761
ES.37208.61	chrX	+	3102	15	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	859.418304103753	1791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74139711	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144719_74146054_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.62	chrX	+	1909	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	252	643	5	-643	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTATAGAACCTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	74139711	74152740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.63	chrX	+	2437	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1086.20981006401	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139711	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.64	chrX	+	2396	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	5	-173	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	947.11987690286	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAGAATGG	NA	False	NA	NA	False	NA	NA	NA	74139711	74153210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.65	chrX	+	3162	16	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-5	105409	intron_retention	FALSE	non_canonical	0	0	junction_15	830.281917316174	1794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	74139715	74258792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258759
ES.37208.66	chrX	+	3074	15	NNC	ENSMUSG00000031403.15	novel	963	8	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	979.166234766152	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74139742	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74140321_74140439_74140508_74140925_74140976_74142067_74142160_74142368_74142558_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.67	chrX	+	3090	14	NIC	ENSMUSG00000031403.15	novel	541	6	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	991.353011242417	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139743	74153383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140321_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.68	chrX	+	2967	14	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	287	256	26	-256	3prime_fragment	FALSE	canonical	3	1536	junction_8	506.912011085009	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74139746	74153127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.69	chrX	+	2291	11	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	2900	1	-1164	-1	3prime_fragment	FALSE	canonical	3	1536	junction_5	550.215276051111	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74142359	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.7	chrX	+	2700	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	42	3	combination_of_known_junctions	FALSE	canonical	3	147	junction_5	713.258221081838	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGCTTTTCCTTTGG	NA	False	NA	37	True	ATTAAA	-24	NA	74139501	74153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.70	chrX	+	1346	11	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	845.701300696647	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74143681	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74152427_74153131
ES.37208.71	chrX	+	2026	9	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	4578	8	173	-8	3prime_fragment	FALSE	canonical	3	1536	junction_3	521.677687250471	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTATTTTGAATTTGC	NA	False	NA	26	True	ATTAAA	-13	NA	74144037	74153375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.72	chrX	+	2024	8	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	5017	1	-77	-1	3prime_fragment	FALSE	canonical	3	1536	junction_2	488.001714617262	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74144476	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.73	chrX	+	1471	5	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1929	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1175.37483382962	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147625	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147707_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.74	chrX	+	1707	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1821	3	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGCTTTTCCTTTGG	NA	False	NA	37	True	ATTAAA	-24	NA	74147733	74153386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.75	chrX	+	1750	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	-1	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_1	978.331643950841	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147761	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147882_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.77	chrX	+	2319	5	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-1793	-1	intron_retention	FALSE	canonical	3	2464	junction_4	163.795604336624	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147761	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74148067_74149259_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.78	chrX	+	1601	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	-1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	1169.11058311674	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74147761	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147807_74147945_74148067_74149259_74149305_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.79	chrX	+	5620	1	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-1793	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1790	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74147761	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74147800_74153400
ES.37208.8	chrX	+	3469	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	42	1	intron_retention	FALSE	canonical	3	1536	junction_8	506.912011085009	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTGCTTTTCCTTT	NA	False	NA	35	True	ATTAAA	-22	NA	74139501	74153384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.80	chrX	+	3426	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	-1611	-1793	1611	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGTGGCAGTCTTAT	NA	False	NA	NA	False	AATACA	-15	NA	74147761	74154994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.82	chrX	+	1757	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1015.98038312208	1790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74147761	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147890_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.83	chrX	+	1656	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	159	-1793	-159	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74147761	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.84	chrX	+	1191	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	624	-1793	-624	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAGAGAAAAAATGTAAT	NA	False	NA	NA	False	ATTAAA	-30	NA	74147761	74152759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.85	chrX	+	1517	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	-159	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	1786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAATTGTTCAGAATG	NA	False	NA	NA	False	NA	NA	NA	74147761	74153224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.86	chrX	+	3903	6	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	8302	-2088	-1793	2088	3prime_fragment	FALSE	canonical	3	2464	junction_5	150.861525910353	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAGTTGACAATGAC	NA	False	NA	NA	False	AATAAA	-32	NA	74147761	74155471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ES.37208.88	chrX	+	3933	4	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-1792	-2	intron_retention	FALSE	canonical	3	2464	junction_3	192.161390502879	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGAATTTGCTTTTCC	NA	False	NA	32	True	ATTAAA	-19	NA	74147762	74153381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74149379_74149883_74149988_74150777_74151911_74152301
ES.37208.89	chrX	+	1843	7	NNC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	-1792	105413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1015.98038312208	1793	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74147762	74258796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301_74153378_74258761
ES.37208.91	chrX	+	4123	2	ISM	ENSMUSG00000031403.15	ENSMUST00000137286.2	610	3	-1340	-1245	-1340	-256	intron_retention	FALSE	canonical	3	2926	junction_1	0	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74148214	74153127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74149988_74150777
ES.37208.92	chrX	+	1288	3	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	11316	1	1221	-1	3prime_fragment	FALSE	canonical	3	2464	junction_2	105	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	False	NA	33	True	ATTAAA	-20	NA	74150775	74153382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74150857_74151784_74151911_74152301
ES.37208.93	chrX	+	8344	1	Intergenic	novelGene_30425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGATCTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	74244103	74252447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74244100_74252400
ES.37209.1	chrX	+	177	1	Intergenic	novelGene_30426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATCTTACT	1679	False	NA	NA	False	NA	NA	NA	74262571	74262748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74262600_74262700
ES.3721.1	chr10	-	223	1	Intergenic	novelGene_2835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGAGGGAAACGTTTC	NA	False	NA	NA	False	NA	NA	NA	108248421	108248198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108248200_108248400
ES.37210.1	chrX	+	178	1	Intergenic	novelGene_30428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGTATGCACATTT	1583	False	NA	NA	False	NA	NA	NA	74308772	74308950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74308800_74309000
ES.37211.1	chrX	+	216	1	Intergenic	novelGene_30429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGGGTAAAGGAATGAG	4075	False	NA	NA	False	NA	NA	NA	74317322	74317538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74317300_74317500
ES.37212.1	chrX	-	2091	15	Antisense	novelGene_ENSMUSG00000089014.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTATGGTGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	74152876	74139665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_74139732_74140437_74140508_74140888_74140974_74142065_74142158_74142366_74142551_74143632_74143700_74144037_74144162_74144591_74144725_74146025_74146172_74147945_74148066_74149258_74149377_74149881_74149986_74150775_74150855_74151782_74151910_74152300
ES.37213.2	chrX	-	4374	11	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	2	374	intron_retention	FALSE	canonical	3	210	junction_6	19.3659494990563	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGACCCTGTAACTCCA	NA	False	NA	-6	True	AATAAA	-21	NA	74174620	74153879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74167588_74168976_74169056_74169342_74169487_74174330
ES.37213.3	chrX	-	1934	13	NNC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	-7323	373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.2872442966396	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTGACCCTGTAACTCC	NA	False	NA	-7	True	AATAAA	-20	NA	74181945	74153880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330_74174510_74181881
ES.37213.4	chrX	-	2536	11	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	14	373	intron_retention	FALSE	canonical	3	210	junction_5	20.4068615911414	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTGACCCTGTAACTCC	NA	False	NA	-7	True	AATAAA	-20	NA	74174608	74153880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ES.37213.5	chrX	-	4153	6	NIC	ENSMUSG00000031402.13	novel	2525	12	NA	NA	-4266	373	intron_retention	FALSE	canonical	3	219	junction_5	16.1071412733607	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTGACCCTGTAACTCC	NA	False	NA	-7	True	AATAAA	-20	NA	74165720	74153880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157921_74159661_74161559_74165040
ES.37213.8	chrX	-	1868	8	NIC	ENSMUSG00000031402.13	novel	1558	11	NA	NA	-13	161	intron_retention	FALSE	canonical	3	210	junction_2	21.3168516264787	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACGTCCTGATTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	74174605	74157009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ES.37214.1	chrX	-	5392	14	NNC	ENSMUSG00000031196.14	novel	9784	26	NA	NA	76743	-37522	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.737820234355803	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACCTGTCTTTGATCTT	6695	False	NA	NA	False	AATAAA	-14	NA	74346904	74253846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74254147_74254975_74255125_74255523_74255669_74295263_74295420_74303603_74303690_74305250_74305323_74306023_74306141_74307057_74307241_74307414_74307644_74308119_74308330_74311035_74311190_74328972_74331986_74339695_74339906_74346536
ES.37214.2	chrX	-	200	1	Intergenic	novelGene_30427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGGTTTATAGTTCCT	9507	False	NA	NA	False	NA	NA	NA	74272215	74272015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74272000_74272200
ES.37214.3	chrX	-	194	1	Intergenic	novelGene_30430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCATTTTCTTCGCCTCT	NA	False	NA	NA	False	NA	NA	NA	74321683	74321489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74321500_74321700
ES.37215.1	chrX	+	1018	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	-167	1711	-167	420	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTTGGTATCTTGG	370	False	NA	NA	False	AATACA	-17	NA	74425837	74438354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.2	chrX	+	1068	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	17	1477	-6	654	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATTTGAAATGTATTT	554	False	NA	NA	False	AATACA	-10	NA	74426021	74438588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.3	chrX	+	4661	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	18	-2117	-5	2117	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTACTAAGAGCATAA	555	False	NA	NA	False	AATAAA	-15	NA	74426022	74442182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.4	chrX	+	3238	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	26	-702	3	702	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGTCATAGTGTC	563	False	NA	9	True	NA	NA	NA	74426030	74440767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.5	chrX	+	4362	4	NIC	ENSMUSG00000031198.5	novel	2562	5	NA	NA	3	426	intron_retention	FALSE	canonical	3	165	junction_1	29.227080289044	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTATCTTGGTGTATG	563	False	NA	NA	False	AATACA	-23	NA	74426030	74438360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74426058_74430707_74434466_74435245_74435378_74437915
ES.37215.6	chrX	+	2529	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	32	1	9	-1	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTCAGACTCCACTTG	569	False	NA	NA	False	AATAAA	-20	NA	74426036	74440064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.7	chrX	+	3326	5	NNC	ENSMUSG00000031198.5	novel	302	3	NA	NA	94	700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.516167853734	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTGGTCATAGTG	654	False	NA	7	True	NA	NA	NA	74426121	74440765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74426239_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ES.37215.8	chrX	+	2850	1	Genic_Genomic	ENSMUSG00000031198.5	novel	NA	NA	NA	NA	7206	698	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCTGTGGTCATAG	8216	False	NA	5	True	NA	NA	NA	74437913	74440763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_74437900_74440800
ES.37216.1	chrX	-	1983	12	NIC	ENSMUSG00000031196.14	novel	7295	25	NA	NA	-88	15431	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.61603534860283	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTCTTGATATAGATA	2607	False	NA	NA	False	AATAAA	-28	NA	74426309	74366456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74366750_74373963_74374058_74374993_74375166_74376106_74376366_74377556_74377779_74378301_74378419_74381825_74381895_74397646_74397860_74409607_74409731_74411704_74411827_74423092_74423183_74426100
ES.37217.1	chrX	+	1397	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-291	63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATACTATGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	74459942	74494401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.10	chrX	+	1482	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAAAAAGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74460280	74494824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.12	chrX	+	3049	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-6	835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACTTGACACTTTCAT	NA	False	NA	NA	False	NA	NA	NA	74460296	74496426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.13	chrX	+	5945	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-5	1700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	531.518370122593	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGGTCATGGTATTT	NA	False	NA	14	True	NA	NA	NA	74460297	74499307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466506_74479072_74479159_74479711_74479799_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.14	chrX	+	4934	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-5	1700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	536.877499994179	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGGTCATGGTATTT	NA	False	NA	14	True	NA	NA	NA	74460297	74499307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493749_74494289_74498147_74499157
ES.37217.15	chrX	+	3717	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-5	-531	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	339	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATGCTTTGAGGAAAA	NA	False	NA	NA	False	ACTAAA	-14	NA	74460297	74497076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.16	chrX	+	4244	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460297	74497607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460463_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.17	chrX	+	3076	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-4	845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTCATCATTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	74460298	74496436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.18	chrX	+	3015	9	NNC	ENSMUSG00000031201.18	novel	2521	9	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_2	435.05480976539	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTTTTAACATTGT	NA	False	NA	NA	False	NA	NA	NA	74460303	74494830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.19	chrX	+	1952	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAAGGTTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	74460303	74495317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.20	chrX	+	4779	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	482.141819774016	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATCTTTATGACTTTG	NA	False	NA	NA	False	NA	NA	NA	74460303	74497606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.26	chrX	+	4223	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTATGACTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	74460305	74497609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.3	chrX	+	4303	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	20	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGGTTTTTAGCAGT	NA	False	NA	NA	False	NA	NA	NA	74460253	74497618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.31	chrX	+	3032	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	1	814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAATAATAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	74460306	74496405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460458_74462012_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.32	chrX	+	3614	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	1	853	intron_retention	FALSE	non_canonical	0	0	junction_1	482.141819774016	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTCTTCCAAATCTACC	NA	False	NA	NA	False	NA	NA	NA	74460306	74496444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.34	chrX	+	1509	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_1	482.141819774016	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATAATGTTGGAGGGA	NA	False	NA	NA	False	NA	NA	NA	74460306	74494339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.35	chrX	+	887	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	1	-604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	482.141819774016	324	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAAATGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	74460306	74493734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460452_74462016_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.37	chrX	+	4100	9	NNC	ENSMUSG00000031201.18	novel	2521	9	NA	NA	1	326	intron_retention	FALSE	non_canonical	0	0	junction_2	435.05480976539	333	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCAAGTATACTTTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	74460306	74495917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74462072_74466384_74466506_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.38	chrX	+	2671	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	2	468	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTTGTATCCTCTCTG	NA	False	NA	NA	False	AAAACA	-15	NA	74460307	74496059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.4	chrX	+	1117	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	27	1700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	519.51988756952	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGGTCATGGTATTT	NA	False	NA	14	True	NA	NA	NA	74460260	74499307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74499157
ES.37217.43	chrX	+	1988	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	5	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	482.141819774016	326	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAAAAAGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74460310	74494824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.47	chrX	+	2446	8	NNC	ENSMUSG00000031201.18	novel	2521	9	NA	NA	-3	-604	intron_retention	FALSE	non_canonical	0	0	junction_2	392.308864159299	324	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAAATGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	74460312	74493734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.48	chrX	+	945	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATAATGTTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	74460312	74494338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.49	chrX	+	4966	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	424.241574554224	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460312	74497607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74461200_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.5	chrX	+	800	7	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	32	-604	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585.543242543955	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAAAAAATGTGGTA	NA	False	NA	NA	False	AATAAA	-8	NA	74460265	74493734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74490761_74490894_74491408_74491453_74493574
ES.37217.50	chrX	+	4905	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	-3	1702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	514.05000729501	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTCATGGTATTTTA	NA	False	NA	16	True	NA	NA	NA	74460312	74499309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289_74498147_74499157
ES.37217.51	chrX	+	6449	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	-1	1701	intron_retention	FALSE	non_canonical	0	0	junction_3	478.090145788428	343	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGGTATTTT	NA	False	NA	15	True	NA	NA	NA	74460314	74499308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.52	chrX	+	1356	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTATTAAGAGAAAATC	NA	False	NA	NA	False	NA	NA	NA	74460315	74494744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462008_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.53	chrX	+	1426	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	487.484573988289	326	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAAAAAGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74460315	74494824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462016_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.55	chrX	+	6468	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	0	1700	intron_retention	FALSE	non_canonical	0	0	junction_1	482.141819774016	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGGTCATGGTATTT	NA	False	NA	14	True	NA	NA	NA	74460315	74499307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37217.57	chrX	+	3066	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	1	815	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	74460316	74496406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466506_74479033_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.58	chrX	+	4217	10	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	490.737087337903	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460317	74497607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74462008_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ES.37217.60	chrX	+	176	1	Intergenic	novelGene_30431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAACTACCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	74469582	74469758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74469600_74469800
ES.37217.8	chrX	+	5812	9	NNC	ENSMUSG00000031201.18	novel	2521	9	NA	NA	-26	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	473.668644069881	340	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAATCTTTATGACTTT	NA	False	NA	NA	False	NA	NA	NA	74460276	74497605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74462072_74466384_74466505_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493749_74494289
ES.37217.9	chrX	+	939	9	NNC	ENSMUSG00000031201.18	novel	2473	10	NA	NA	-25	-598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	482.141819774016	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTGGTAATATTT	NA	False	NA	NA	False	AATAAA	-14	NA	74460277	74493740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74460448_74461997_74462072_74466384_74466507_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ES.37218.1	chrX	-	4740	1	Genic_Genomic	ENSMUSG00000090110.9	novel	NA	NA	NA	NA	359	32	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTAGATACAGATGTTA	NA	False	NA	NA	False	ATTAAA	-33	NA	74453159	74448419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_74448400_74453200
ES.37218.10	chrX	-	2672	5	FSM	ENSMUSG00000031200.17	ENSMUST00000033542.11	1592	5	-7	-1073	-7	1073	multi-exon	FALSE	canonical	3	22	junction_1	5.33853912601566	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGAGGCTGTCTTAAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	74460156	74452976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
ES.37218.11	chrX	-	1988	6	FSM	ENSMUSG00000031200.17_ENSMUSG00000090110.9	ENSMUST00000114081.2	980	6	5	-1013	1	680	multi-exon	FALSE	canonical	3	22	junction_1	14.0370937162933	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAATGAAGAAAGAGTAT	NA	False	NA	NA	False	TATAAA	-18	NA	74460189	74453369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
ES.37218.14	chrX	-	1572	6	NNC	ENSMUSG00000031200.17	novel	980	6	NA	NA	-6	172	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	7.05974503788912	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTTTTGCGTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	74460155	74453877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460017
ES.37218.15	chrX	-	3917	1	NIC	ENSMUSG00000090110.9	novel	992	3	NA	NA	23	-7556	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAGGTTTTATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	74460148	74456231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74456200_74460100
ES.37218.16	chrX	-	2989	1	NIC	ENSMUSG00000090110.9	novel	992	3	NA	NA	26	-8481	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAATGTCAACATGTT	NA	False	NA	NA	False	AATAAA	-22	NA	74460145	74457156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74457200_74460100
ES.37218.17	chrX	-	2715	2	FSM	ENSMUSG00000031200.17	ENSMUST00000147830.2	3071	2	-27	383	-7	-383	multi-exon	FALSE	canonical	3	62	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATGTAAATGTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	74460201	74457162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74459820_74460143
ES.37218.2	chrX	-	2592	7	NIC	ENSMUSG00000031200.17	novel	980	6	NA	NA	-8	5598	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	21.2243309016379	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460202	74448451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
ES.37218.3	chrX	-	7242	4	NIC	ENSMUSG00000031200.17	novel	1109	4	NA	NA	6	5598	intron_retention	FALSE	canonical	3	22	junction_2	26.5120517668642	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460188	74448451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957
ES.37218.4	chrX	-	7123	5	NIC	ENSMUSG00000031200.17	novel	1592	5	NA	NA	-7	5598	intron_retention	FALSE	canonical	3	22	junction_2	23.8222584991432	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460181	74448451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240
ES.37218.7	chrX	-	684	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	0	-177	0	-3	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTTTGTTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	74460190	74448454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
ES.37218.8	chrX	-	7174	4	Fusion	ENSMUSG00000031200.17_ENSMUSG00000090110.9	novel	1592	5	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	22	junction_2	26.3185612575358	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTTTGTTACTA	NA	False	NA	NA	False	AATAAA	-14	NA	74460153	74448454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_74448825_74453151_74454738_74454823_74455129_74455240
ES.37218.9	chrX	-	6215	4	ISM	ENSMUSG00000031200.17_ENSMUSG00000090110.9	ENSMUST00000033542.11	1592	5	3304	-3699	3179	-1675	3prime_fragment	FALSE	canonical	3	22	junction_1	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACCTTGTGCACCCAC	NA	False	NA	NA	False	NA	NA	NA	74456845	74450350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240
ES.37219.1	chrX	+	1611	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	-15	-1	-15	1	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACAATTTTTTCATTT	NA	False	NA	15	True	ATTAAA	-21	NA	74557889	74578549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ES.37219.12	chrX	+	1349	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	30	216	12	-216	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGTAAGCTTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	74557934	74578332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ES.37219.13	chrX	+	1548	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	760.710299654211	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	74557934	74578541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577523
ES.37219.18	chrX	+	647	5	ISM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	30	3602	12	-3602	5prime_fragment	FALSE	canonical	3	1825	junction_3	58.6403231573633	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATAATGACTGTCATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	74557934	74574946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690
ES.37219.19	chrX	+	1540	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	719.641466287206	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	74557934	74578541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566947_74574690_74574830_74577513
ES.37219.21	chrX	+	2796	6	Fusion	ENSMUSG00000031197.12_ENSMUSG00000086573.2	novel	1595	6	NA	NA	13	1920	multi-exon	FALSE	canonical	0	0	junction_4	914.942708588904	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATAGTGTTTTTCACA	NA	False	NA	NA	False	NA	NA	NA	74557935	74597350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74594722_74594777_74594998
ES.37219.22	chrX	+	612	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	31	952	13	-952	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGATTCAGGTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	74557935	74577596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ES.37219.23	chrX	+	1544	6	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	17	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	753.262132328448	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACCTGTTGCCTGACAA	NA	False	NA	4	True	ATTAAA	-10	NA	74557939	74578538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74558035_74560694_74560814_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ES.37219.25	chrX	+	5867	1	Intergenic	novelGene_30432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAATTCCTGACCCAT	NA	False	NA	NA	False	NA	NA	NA	74567801	74573668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74567800_74573700
ES.37219.26	chrX	+	3750	2	ISM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	14205	5	14187	-5	3prime_fragment	FALSE	canonical	3	1794	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCCTGACAATTTTT	NA	False	NA	9	True	ATTAAA	-15	NA	74572109	74578543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_74574830_74577513
ES.37219.27	chrX	+	3628	1	NIC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	16991	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	74574913	74578541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74574900_74578500
ES.37219.4	chrX	+	1727	7	NNC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	853.626853815855	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	74557906	74578541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74567441_74567583_74574690_74574830_74577513
ES.37219.5	chrX	+	3410	5	NIC	ENSMUSG00000031197.12	novel	1595	6	NA	NA	8	-7	intron_retention	FALSE	canonical	3	1794	junction_4	68.8385792996921	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	False	NA	7	True	ATTAAA	-13	NA	74557912	74578541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_74558035_74560694_74560820_74564968_74566965_74574690_74574830_74577513
ES.3722.1	chr10	-	1958	2	Antisense	novelGene_ENSMUSG00000112532.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAGCAAGACTGGAAACA	NA	False	NA	NA	False	NA	NA	NA	108278911	108269373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_108271170_108278749
ES.37220.1	chrX	-	3622	1	Intergenic	novelGene_30433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAATCCTG	NA	False	NA	NA	False	NA	NA	NA	74572705	74569083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74569100_74572700
ES.37221.1	chrX	+	4728	1	Genic_Genomic	ENSMUSG00000086937.2	novel	NA	NA	NA	NA	-2527	384	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAGAAAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	74614530	74619258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_74614500_74619300
ES.37221.2	chrX	+	2974	2	FSM	ENSMUSG00000086937.2	ENSMUST00000152648.2	895	2	-1689	-390	-1689	390	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATCCTTCCATCTGTA	NA	False	NA	NA	False	NA	NA	NA	74615368	74619264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_74617409_74618330
ES.37222.1	chrX	-	3408	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	-15	8	-15	-8	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCCATATGTGTGTT	427	False	NA	NA	False	AGTAAA	-20	NA	74621852	74615659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74618614_74621398
ES.37223.1	chrX	-	3050	1	Genic_Genomic	ENSMUSG00000087396.8	novel	NA	NA	NA	NA	-15903	1906	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACAGCTTATGTTATCCA	NA	False	NA	NA	False	ATTAAA	-16	NA	74770214	74767164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_74767200_74770200
ES.37223.2	chrX	-	3007	3	NNC	ENSMUSG00000087396.8	novel	3369	9	NA	NA	-21095	515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-11	NA	74775406	74768555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74771125_74774625_74774789_74775131
ES.37223.3	chrX	-	3350	2	ISM	ENSMUSG00000087396.8	ENSMUST00000130744.8	3369	9	32899	-515	-21095	515	3prime_fragment	FALSE	canonical	1	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-11	NA	74775406	74768555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_74771125_74774625
ES.37223.5	chrX	-	3145	9	NNC	ENSMUSG00000087396.8	novel	3369	9	NA	NA	4434	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.61535599791501	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGGCTCACTCACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	74803871	74769065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74771125_74774625_74774789_74775131_74775206_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74803837
ES.37224.1	chrX	-	4458	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	69	-1378	-14	1378	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAGCAAAGTATCGAAATC	NA	False	NA	NA	False	NA	NA	NA	74918719	74827881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.11	chrX	-	3139	17	NIC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	100.453269608311	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74918750	74829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74917943_74917986_74918653
ES.37224.14	chrX	-	2915	15	ISM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	69	4227	-14	-3110	5prime_fragment	FALSE	canonical	3	263	junction_12	29.3619217521536	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCAGTATGGTGTG	NA	False	NA	NA	False	NA	NA	NA	74918719	74833486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.15	chrX	-	4704	6	NIC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	-15	-11707	intron_retention	FALSE	canonical	3	263	junction_3	30.7310917476096	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTCCTTAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74918720	74842083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.16	chrX	-	841	5	ISM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	68	19220	-15	-18103	5prime_fragment	FALSE	canonical	3	263	junction_2	34.358405085219	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAAGTGTGTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	74918720	74848479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.17	chrX	-	3386	3	ISM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	45	27379	-38	-26262	5prime_fragment	FALSE	canonical	3	314	junction_1	22.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATCACTTTGCCTTGCT	NA	False	NA	NA	False	AAAACA	-15	NA	74918743	74856638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_74859854_74870478_74870560_74918653
ES.37224.18	chrX	-	5381	1	Intergenic	novelGene_30434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCATTATTCACCC	NA	False	NA	NA	False	NA	NA	NA	74895009	74889628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_74889600_74895000
ES.37224.2	chrX	-	3176	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	-27	0	-27	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTTTTGTTTTAATGA	NA	False	NA	NA	False	AATAAA	-26	NA	74918815	74829259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.3	chrX	-	3061	16	NNC	ENSMUSG00000016382.16	novel	3032	16	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	80.1414305393215	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74918656	74829268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918600
ES.37224.6	chrX	-	3067	16	NNC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.1776936481752	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTCTCTACTCTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	74918751	74829271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74830506_74834567_74834635_74834865_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.7	chrX	-	3121	16	NNC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	82.1776936481752	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74918779	74829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74830506_74834567_74834687_74834889_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.8	chrX	-	3078	16	NNC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	81.7986688291577	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74918740	74829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838983_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ES.37224.9	chrX	-	3094	16	NNC	ENSMUSG00000016382.16	novel	3149	16	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	81.9966394975361	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74918720	74829273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859881_74870478_74870560_74918653
ES.37225.1	chrX	+	223	1	Intergenic	novelGene_30435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGAAGATGATTCTCAT	NA	False	NA	NA	False	NA	NA	NA	74928041	74928264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_74928000_74928300
ES.37226.1	chrX	+	202	1	Intergenic	novelGene_30436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAACAATTAATGAAAG	5804	False	NA	NA	False	NA	NA	NA	75110245	75110447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_75110200_75110400
ES.37227.1	chrX	-	4316	1	Intergenic	novelGene_30437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATACAAAGTTGACCAATG	9839	False	NA	NA	False	NA	NA	NA	75406737	75402421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_75402400_75406700
ES.37228.1	chrX	-	176	1	Intergenic	novelGene_30438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAAGCAAGCAGGGACT	NA	False	NA	NA	False	NA	NA	NA	76281449	76281273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_76281300_76281400
ES.37229.1	chrX	-	176	1	Intergenic	novelGene_30439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATAAGATCAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	76548607	76548431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_76548400_76548600
ES.3723.1	chr10	-	251	1	Intergenic	novelGene_2836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAATTTTGCCCAGTTT	743	False	NA	NA	False	AATAAA	-24	NA	108295828	108295577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108295600_108295800
ES.37230.1	chrX	+	5363	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1772	8	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	120.425283428726	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTGTGTTTTTCTTTT	NA	False	NA	20	True	AATAAA	-28	NA	76552846	76706597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553225_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.10	chrX	+	2322	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-376	393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.057426164308	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76554242	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554281_76654979_76655134_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.11	chrX	+	2669	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-282	2847	-282	393	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76554336	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.12	chrX	+	3102	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-206	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	121.380326221962	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACATAGTGACTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	76554412	76706588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320_76704105_76706441
ES.37230.13	chrX	+	5507	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-205	2	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554413	76706591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.14	chrX	+	2454	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-194	393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.380326221962	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76554424	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554650_76554776_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.16	chrX	+	5585	18	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-187	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	179.349651736084	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACATAGTGACTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	76554431	76706588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76628399_76628466_76661681_76661781_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.17	chrX	+	2892	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-182	2524	-182	716	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATGCACACAGTGGAT	NA	False	NA	NA	False	AATGAA	-18	NA	76554436	76704065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.18	chrX	+	2377	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-167	3024	-167	216	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGGAATATGGTTTCC	NA	False	NA	NA	False	AATACA	-20	NA	76554451	76703565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.2	chrX	+	6124	15	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1590	-1	intron_retention	FALSE	canonical	3	15	junction_1	124.634588346273	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACATAGTGACTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	76553028	76706588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553225_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.20	chrX	+	3079	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-163	2318	-163	922	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGGAGTATTTTTTGA	NA	False	NA	NA	False	AAAAAG	-19	NA	76554455	76704271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.21	chrX	+	3936	14	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-162	393	intron_retention	FALSE	canonical	3	377	junction_1	43.2058510173122	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76554456	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.23	chrX	+	2659	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-162	2737	-162	503	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGACTTTGTAATCCCA	NA	False	NA	14	True	AAAAAG	-22	NA	76554456	76703852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.24	chrX	+	1831	13	ISM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-162	9670	-162	-6430	5prime_fragment	FALSE	canonical	3	377	junction_1	40.1441845795323	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGAACTCCAACATCATG	NA	False	NA	NA	False	NA	NA	NA	76554456	76696919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819
ES.37230.25	chrX	+	2597	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-144	393	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76554474	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.26	chrX	+	5398	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-137	-89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	232.485945475743	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTGTGTGTTGTAGCT	NA	False	NA	-77	True	AAGAAA	-6	NA	76554481	76706500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691388_76691531_76691857_76692000_76692259_76692328_76692437_76692516_76693478_76693526_76693971_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76699574_76699709_76702306_76702409_76703320
ES.37230.27	chrX	+	3133	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-97	2198	-97	1042	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCTGAGGTGTCTAAT	NA	False	NA	NA	False	TTTAAA	-19	NA	76554521	76704391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.28	chrX	+	5457	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-90	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	159.676614110364	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACATAGTGACTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	76554528	76706588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76699574_76699709_76702306_76702409_76703320
ES.37230.29	chrX	+	4306	12	NIC	ENSMUSG00000025246.14	novel	3611	13	NA	NA	-61	499	intron_retention	FALSE	canonical	3	377	junction_1	46.1094637208903	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGACTTTGTAAT	NA	False	NA	10	True	AAAAAG	-18	NA	76554557	76703848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.3	chrX	+	2428	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1590	495	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	120.425283428726	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAATGTGTGACTTTG	NA	False	NA	6	True	AAAAAG	-14	NA	76553028	76703844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553225_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.30	chrX	+	6691	15	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-2	2	intron_retention	FALSE	canonical	3	50	junction_1	154.397727195919	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554616	76706591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.33	chrX	+	5309	18	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	8	9546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	173.137743431905	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTATCTTTTGACCTTA	NA	False	NA	NA	False	AAAACA	-5	NA	76554626	76716135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320_76706591_76716119
ES.37230.34	chrX	+	5131	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	124.36773429364	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAACATAGTGACTGTG	NA	False	NA	10	True	AATAAA	-18	NA	76554627	76706587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687080_76689822_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.35	chrX	+	9806	14	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	11	1	intron_retention	FALSE	canonical	3	50	junction_1	156.970920308461	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76554629	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76694097_76696369_76696445_76696819_76696948_76699011_76702409_76703320
ES.37230.37	chrX	+	2543	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	38	521	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGCTGTATTTTCTAGAA	NA	False	NA	32	True	AAAAAG	-40	NA	76554656	76703870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.38	chrX	+	5092	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	45	97	45	-97	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCACCTTGTGTG	NA	False	NA	-85	True	NA	NA	NA	76554663	76706492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.4	chrX	+	5215	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1565	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	153.070028397953	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76553053	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553225_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.40	chrX	+	5190	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	55	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.332340421599	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGACTGTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	76554673	76706591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691388_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.42	chrX	+	4912	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	56	266	56	-266	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTTTTGAACTCTGGC	NA	False	NA	NA	False	CATAAA	-19	NA	76554674	76706323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.43	chrX	+	2834	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	62	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	161.373680765328	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGACTGTGTTTTT	NA	False	NA	15	True	AATAAA	-23	NA	76554680	76706592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692261_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320_76704110_76706448
ES.37230.44	chrX	+	6543	14	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	81	3	intron_retention	FALSE	canonical	3	377	junction_1	43.2058510173122	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGACTGTGTTTTT	NA	False	NA	15	True	AATAAA	-23	NA	76554699	76706592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.45	chrX	+	5229	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-96	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.408981704861	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76554723	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76661681_76661781_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.46	chrX	+	2804	3	NNC	ENSMUSG00000025246.14	novel	3611	13	NA	NA	-87	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	188.5	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76554732	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76704024
ES.37230.47	chrX	+	6767	13	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-84	-1	intron_retention	FALSE	canonical	0	0	junction_5	138.960500982593	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACATAGTGACTGTGT	NA	False	NA	11	True	AATAAA	-19	NA	76554735	76706588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690080_76691397_76691531_76691857_76692324_76692428_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.48	chrX	+	5033	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-65	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	121.380326221962	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76554754	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76689935_76690000_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.49	chrX	+	5375	18	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	437	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.870625095404	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76555256	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76555463_76572484_76572533_76573085_76573229_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.5	chrX	+	2327	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1525	393	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	153.070028397953	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGTGATAAACCAAAAGG	NA	False	NA	-96	True	AATAAA	-32	NA	76553093	76703742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553225_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.50	chrX	+	5168	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	453	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.045081410841	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76555272	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76555463_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.51	chrX	+	5248	17	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	700	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.057426164308	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGAACATAGTGACTGT	NA	False	NA	9	True	AATAAA	-17	NA	76555519	76706586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76555727_76562611_76562679_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.52	chrX	+	5169	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	713	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.045081410841	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAACATAGTGACTGTG	NA	False	NA	10	True	AATAAA	-18	NA	76555532	76706587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76555727_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.53	chrX	+	234	1	Intergenic	novelGene_30440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGATTGTGGACTATA	NA	False	NA	NA	False	NA	NA	NA	76562257	76562491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_76562300_76562500
ES.37230.54	chrX	+	2747	1	Intergenic	novelGene_30442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAACAAAATAAGAATTTAC	NA	False	NA	NA	False	AAAACA	-7	NA	76598138	76600885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_76598100_76600900
ES.37230.55	chrX	+	5043	16	NIC	ENSMUSG00000025246.14	novel	3611	13	NA	NA	73578	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	111.051619628992	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAACATAGTGACTGTG	NA	False	NA	10	True	AATAAA	-18	NA	76628397	76706587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.56	chrX	+	4980	15	ISM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	122531	-1	122330	1	3prime_fragment	FALSE	canonical	3	437	junction_14	32.0239068860265	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76677149	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.57	chrX	+	3223	6	ISM	ENSMUSG00000025246.14	ENSMUST00000133893.2	3611	13	136906	-352	136906	352	3prime_fragment	FALSE	canonical	3	437	junction_5	37.6319013604149	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGAAAAGGTTA	NA	False	NA	NA	False	NA	NA	NA	76691725	76703701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.58	chrX	+	5951	6	ISM	ENSMUSG00000025246.14	ENSMUST00000133893.2	3611	13	137066	-3240	137066	0	3prime_fragment	FALSE	canonical	3	437	junction_5	37.6319013604149	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76691885	76706589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.6	chrX	+	5019	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1222	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.045081410841	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGTGACTGTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	76553396	76706590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76553438_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.7	chrX	+	5863	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	-619	-10	-619	10	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTGTTTTTCTTTTTG	NA	False	NA	22	True	AATAAA	-30	NA	76553999	76706599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.8	chrX	+	2324	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-426	499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.045081410841	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGACTTTGTAAT	NA	False	NA	10	True	AAAAAG	-18	NA	76554192	76703848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554281_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37230.9	chrX	+	5014	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-377	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.045081410841	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAACATAGTGACTGTG	NA	False	NA	10	True	AATAAA	-18	NA	76554241	76706587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_76554281_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ES.37231.1	chrX	-	1653	13	Antisense	novelGene_ENSMUSG00002076902.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGTCGAGACTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	76696920	76554637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_76554874_76677149_76677245_76684997_76685111_76687013_76687161_76689811_76690076_76691397_76691527_76691851_76692000_76692259_76692323_76692427_76692525_76693476_76693537_76693971_76694097_76696369_76696443_76696817
ES.37231.2	chrX	-	855	1	Intergenic	novelGene_30441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAGATGGTTGAGAAAC	NA	False	NA	NA	False	NA	NA	NA	76575724	76574869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_76574900_76575700
ES.37232.1	chrX	-	2658	2	Antisense	novelGene_ENSMUSG00000025246.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTTAGGGGGAGGAAAAA	3461	False	NA	NA	False	AAGAAA	-5	NA	76704116	76700546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_76702409_76703320
ES.37233.1	chrX	-	4485	10	NNC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	-55	439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.916648221919	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839633	76804577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76826183_76826335_76829733_76829903_76839153
ES.37233.10	chrX	-	4142	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	325	-321	19	321	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTGTGTATATCTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	76839559	76804695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.11	chrX	-	3525	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	9	612	9	-612	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATCCCCTCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	76839875	76805628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.12	chrX	-	3055	8	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	38	-651	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	17.4086537242199	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	76839540	76805667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.13	chrX	-	2775	7	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	35	-814	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.7800404448525	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCTGGAGAGATGG	NA	False	NA	NA	False	AATAAA	-15	NA	76839543	76805830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76825643_76825908_76829733_76829903_76839153
ES.37233.14	chrX	-	4366	2	Genic_Genomic	ENSMUSG00000035725.14	novel	4146	9	NA	NA	13900	-6118	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCAGAAAGGTTC	NA	False	NA	NA	False	NA	NA	NA	76825678	76821178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_76823299_76823432
ES.37233.15	chrX	-	2610	1	Intergenic	novelGene_30443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTGCAGAAAGGTTC	NA	False	NA	NA	False	NA	NA	NA	76823788	76821178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_76821200_76823800
ES.37233.2	chrX	-	4576	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	9	-439	9	439	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839875	76804577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.3	chrX	-	5237	4	NNC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	23632	439	intron_retention	TRUE	non_canonical	0	0	junction_3	24.3447461820136	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76815946	76804577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_76807498_76807711_76809013_76814852_76815466_76815543
ES.37233.4	chrX	-	4178	8	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	5	439	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	17.4086537242199	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839573	76804577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.5	chrX	-	4103	7	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	-40	439	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.7800404448525	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTCAGGTCGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	76839618	76804577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76825643_76825908_76829733_76829903_76839153
ES.37233.7	chrX	-	5034	5	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	39	433	intron_retention	FALSE	canonical	0	0	junction_2	22.1740275998746	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTTTCAGGTCG	NA	False	NA	NA	False	AATAAA	-15	NA	76839539	76804583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_76807498_76807711_76809013_76825643_76825908_76829733_76829903_76839153
ES.37233.8	chrX	-	6270	9	NNC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	4	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.2409396495667	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTTTCAGGTCG	NA	False	NA	NA	False	AATAAA	-15	NA	76839880	76804583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76815466_76815543_76816842_76825643_76825908_76829733_76829903_76839153
ES.37233.9	chrX	-	4216	10	NNC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	5	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.2579515208504	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTTTCAGGTCG	NA	False	NA	NA	False	AATAAA	-15	NA	76839573	76804583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_76807084_76807135_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ES.37234.1	chrX	-	273	1	Intergenic	novelGene_30444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCCACCAACAGATT	NA	False	NA	NA	False	CATAAA	-42	NA	77247098	77246825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_77246800_77247100
ES.37235.1	chrX	+	3201	1	Intergenic	novelGene_30445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTCTGTTATTTTCAA	NA	False	NA	NA	False	NA	NA	NA	77585394	77588595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_77585400_77588600
ES.37236.1	chrX	-	3972	5	NNC	ENSMUSG00000047996.17	novel	3851	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.22724133595217	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	77627367	77493218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_77496779_77521434_77521577_77527356_77527518_77564376_77564428_77627309
ES.37236.10	chrX	-	4055	6	NNC	ENSMUSG00000047996.17	novel	3964	5	NA	NA	19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.50999334220743	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGCTTGTTTTTCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	77627439	77493221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_77496779_77521434_77521577_77527356_77527518_77564376_77564428_77605165_77605245_77627374
ES.37236.11	chrX	-	3928	5	NIC	ENSMUSG00000047996.17	novel	3900	4	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.58287544405155	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGCTTGTTTTTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	77627498	77493222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77496779_77526031_77526068_77527356_77527518_77564376_77564428_77627374
ES.37236.12	chrX	-	4079	5	NNC	ENSMUSG00000047996.17	novel	3964	5	NA	NA	-22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.58287544405155	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACAGCTTGTTTTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	77627410	77493223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_77496779_77527356_77527518_77564376_77564428_77605165_77605251_77627183
ES.37236.13	chrX	-	6120	1	FSM	ENSMUSG00002075818.1	ENSMUST00020183318.1	134	1	-2373	-3613	-2373	3613	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	77596858	77590738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_77590700_77596900
ES.37236.2	chrX	-	6820	1	NIC	ENSMUSG00000047996.17	novel	3851	4	NA	NA	127350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	77500038	77493218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77493200_77500000
ES.37236.3	chrX	-	3923	4	FSM	ENSMUSG00000047996.17	ENSMUST00000114024.9	3900	4	-23	0	-23	0	multi-exon	FALSE	canonical	3	8	junction_1	4.64279609239471	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	77627525	77493218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627374
ES.37236.4	chrX	-	4116	7	NNC	ENSMUSG00000047996.17	novel	3900	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.92973263854116	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	77627503	77493220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_77496779_77527356_77527518_77536854_77536924_77550519_77550586_77564376_77564428_77579023_77579106_77627374
ES.37236.5	chrX	-	3909	5	NIC	ENSMUSG00000047996.17	novel	3851	4	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.98044484975618	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	77627412	77493220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77496779_77526031_77526068_77527356_77527518_77564376_77564428_77627309
ES.37236.6	chrX	-	3882	4	FSM	ENSMUSG00000047996.17	ENSMUST00000177904.8	3851	4	-33	2	-33	-2	multi-exon	FALSE	canonical	0	0	junction_3	7.78888096369861	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	77627421	77493220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627309
ES.37236.7	chrX	-	3971	5	NIC	ENSMUSG00000047996.17	novel	3964	5	NA	NA	33	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.97764286847643	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	77627425	77493220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77496779_77527356_77527518_77564376_77564428_77605165_77605251_77627309
ES.37236.8	chrX	-	3726	3	NIC	ENSMUSG00000047996.17	novel	3900	4	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGTTTTTCTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	77627491	77493220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77496779_77564376_77564428_77627374
ES.37236.9	chrX	-	4005	5	NIC	ENSMUSG00000047996.17	novel	3964	5	NA	NA	-23	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	7.15891053163818	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGCTTGTTTTTCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	77627525	77493221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_77496779_77527356_77527518_77564376_77564428_77605165_77605251_77627374
ES.37237.1	chrX	-	6773	1	Intergenic	novelGene_30446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTCTGAACTGTCCT	NA	False	NA	NA	False	NA	NA	NA	77987900	77981127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_77981100_77987900
ES.37238.1	chrX	+	1081	4	Intergenic	novelGene_30447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_3	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGTTTCCGTGTCATT	NA	False	NA	NA	False	NA	NA	NA	77989081	77991740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_77989163_77989263_77989454_77990197_77990608_77991340
ES.37238.2	chrX	+	742	2	Intergenic	novelGene_30448	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	77989153	77990639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_77989454_77990197
ES.37239.1	chrX	+	1900	4	Intergenic	novelGene_30449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAATCTTCAAATATGT	NA	False	NA	NA	False	NA	NA	NA	77994567	78013463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_77994647_77994730_77994890_78010771_78010874_78011903
ES.3724.1	chr10	-	177	1	Intergenic	novelGene_2837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	108317542	108317365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_108317400_108317500
ES.37240.1	chrX	-	169	1	Intergenic	novelGene_30450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATTTTTTTGTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	78157160	78156991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_78157000_78157200
ES.37241.1	chrX	+	501	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-27	-72	-27	72	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	78238625	78239126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_78238600_78239100
ES.37242.1	chrX	+	174	1	Intergenic	novelGene_30451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTCTTAAATA	NA	False	NA	NA	False	NA	NA	NA	78340497	78340671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_78340500_78340700
ES.37243.1	chrX	-	3719	29	NIC	ENSMUSG00000073077.8	novel	9568	65	NA	NA	23963	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	0.771792242320511	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTCTCAAGTTGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	78454061	78310163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_78310391_78321251_78321421_78338824_78338987_78339466_78339639_78344628_78344785_78346358_78346454_78357260_78357360_78363827_78363933_78366441_78366554_78376370_78376469_78378396_78378526_78389118_78389231_78393909_78394084_78394638_78394783_78398646_78398844_78403909_78403952_78404498_78404674_78407854_78408079_78409990_78410100_78413147_78413294_78418161_78418230_78424337_78424419_78430259_78430349_78434093_78434245_78434890_78435007_78440022_78440158_78445233_78445351_78445626_78445722_78454041
ES.37243.2	chrX	-	282	2	NIC	ENSMUSG00000073077.8	novel	9568	65	NA	NA	55037	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTCTCAAGTTGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	78338879	78310163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_78310391_78338824
ES.37243.3	chrX	-	2507	1	Intergenic	novelGene_30452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGAAGGAAGGAAGGAT	NA	False	NA	NA	False	NA	NA	NA	78407608	78405101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_78405100_78407600
ES.37244.1	chrX	-	4374	1	NIC	ENSMUSG00000073077.8	novel	9568	65	NA	NA	-9551	-37971	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGTTTTGAATTAGT	NA	False	NA	NA	False	AATAAA	-11	NA	78487575	78483201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_78483200_78487600
ES.37245.1	chrX	+	2742	1	Antisense	novelGene_ENSMUSG00000046942.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAGGAAGTGATGGT	NA	False	NA	NA	False	AAAAAG	-6	NA	78668803	78671545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_78668800_78671500
ES.37246.1	chrX	-	1722	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	1	2	1	-2	multi-exon	FALSE	canonical	3	241	junction_2	42	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCTCTTTTATT	NA	False	NA	-2	True	AATAAA	-20	NA	78679187	78666838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_78668390_78671446_78671527_78679096
ES.37246.2	chrX	-	1948	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	-96	2	-96	-2	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCTCTTTTATT	NA	False	NA	-2	True	AATAAA	-20	NA	78715137	78666838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
ES.37246.3	chrX	-	8959	2	ISM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	334	2	334	-2	3prime_fragment	FALSE	canonical	3	325	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCTCTTTTATT	NA	False	NA	-2	True	AATAAA	-20	NA	78678854	78666838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_78668390_78671446
ES.37246.4	chrX	-	1930	5	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	119	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	126.903506649738	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGCTCTCTTTTATT	NA	False	NA	-2	True	AATAAA	-20	NA	78714922	78666838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78685326_78685395_78714888
ES.37246.5	chrX	-	1873	5	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	107	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.763756397577	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTGCTCTCTTTTAT	NA	False	NA	-3	True	AATAAA	-19	NA	78714934	78666839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_78668390_78671446_78671527_78673437_78673567_78685326_78685395_78714888
ES.37246.6	chrX	-	4756	2	NIC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	22	-4	intron_retention	FALSE	canonical	3	241	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGTGCTCTCTTTTA	NA	False	NA	-4	True	AATAAA	-18	NA	78679166	78666840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_78671527_78679096
ES.37246.7	chrX	-	1918	4	NNC	ENSMUSG00000046942.18	novel	1725	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	145.164274760241	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGTGCTCTCTTTTA	NA	False	NA	-4	True	AATAAA	-18	NA	78679188	78666840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_78668390_78671446_78671527_78673369_78673567_78679096
ES.37246.8	chrX	-	1483	2	NNC	ENSMUSG00000046942.18	novel	1854	4	NA	NA	-56	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGTGCTCTCTTTTA	NA	False	NA	-4	True	AATAAA	-18	NA	78715097	78666840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_78668128_78714901
ES.37247.1	chrX	+	207	1	Intergenic	novelGene_30453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAGCAACAGAAACCAAG	NA	False	NA	NA	False	NA	NA	NA	78766393	78766600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_78766400_78766600
ES.37248.1	chrX	-	1957	1	Intergenic	novelGene_30454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78802350	78800393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_78800400_78802400
ES.37249.1	chrX	+	174	1	Intergenic	novelGene_30455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	78925351	78925525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_78925400_78925500
ES.3725.1	chr10	+	3679	13	NNC	ENSMUSG00000020185.17	novel	817	7	NA	NA	-376	83	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10.7480618407848	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAAAATCCTCCTG	NA	False	NA	NA	False	NA	NA	NA	110580923	110621454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_110581133_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.10	chr10	+	6892	12	NIC	ENSMUSG00000020185.17	novel	5473	13	NA	NA	-15	-15	intron_retention	FALSE	canonical	3	19	junction_6	7.29881684060693	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGTGTATGTTATATTA	NA	False	NA	18	True	AATAAA	-11	NA	110581358	110623230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110616884_110618058_110618481_110620528
ES.3725.11	chr10	+	3597	13	FSM	ENSMUSG00000020185.17	ENSMUST00000173471.8	3567	13	-10	-20	-10	20	multi-exon	FALSE	canonical	0	0	junction_1	10.7480618407848	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTCTGGGTGCCTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	110581363	110621391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110581541_110582179_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.12	chr10	+	5285	12	NIC	ENSMUSG00000020185.17	novel	5473	13	NA	NA	-3	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	10.6925478026706	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATGTTATATTACTTG	NA	False	NA	22	True	AATAAA	-15	NA	110581370	110623234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.13	chr10	+	5556	13	NIC	ENSMUSG00000020185.17	novel	5473	13	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.5382899730248	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTACTTGTAAAACATT	NA	False	NA	31	True	AATAAA	-24	NA	110581372	110623243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_110581670_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.14	chr10	+	4017	2	ISM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	35844	8	17456	-8	3prime_fragment	FALSE	canonical	3	28	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTATATTACTTGTAA	NA	False	NA	25	True	AATAAA	-18	NA	110617172	110623237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_110618481_110620528
ES.3725.15	chr10	+	3302	3	NNC	ENSMUSG00000020185.17	novel	5473	13	NA	NA	18081	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGTGTATGTTATATTA	NA	False	NA	18	True	AATAAA	-11	NA	110617797	110623230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_110618006_110618088_110618481_110620528
ES.3725.2	chr10	+	5486	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	-13	0	-10	0	multi-exon	FALSE	canonical	3	19	junction_6	6.98808509774554	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACTTGTAAAACATTTT	NA	False	NA	33	True	AATAAA	-26	NA	110581315	110623245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.3	chr10	+	2867	3	FSM	ENSMUSG00000020185.17	ENSMUST00000174857.8	2865	3	-4	2	-4	-2	multi-exon	FALSE	canonical	3	33	junction_1	1.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCGTTTTCTTTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	110581321	110592496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110581541_110582192_110582286_110589941
ES.3725.4	chr10	+	3626	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	-7	1854	-4	20	multi-exon	FALSE	canonical	3	19	junction_6	6.98808509774554	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTCTGGGTGCCTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	110581321	110621391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.5	chr10	+	5428	13	NNC	ENSMUSG00000020185.17	novel	5473	13	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.6170722057553	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATATTACTTGTAAAA	NA	False	NA	27	True	AATAAA	-20	NA	110581328	110623239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610541_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.6	chr10	+	3815	12	ISM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	1	3705	1	-1831	5prime_fragment	FALSE	canonical	3	19	junction_6	7.27159082029863	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTTTCCTCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	110581329	110619540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058
ES.3725.8	chr10	+	5472	13	FSM	ENSMUSG00000020185.17	ENSMUST00000173471.8	3567	13	-38	-1867	7	-7	multi-exon	FALSE	canonical	0	0	junction_1	10.7480618407848	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTATATTACTTGTAAA	NA	False	NA	26	True	AATAAA	-19	NA	110581335	110623238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110581541_110582179_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ES.3725.9	chr10	+	1391	6	NIC	ENSMUSG00000020185.17	novel	2226	7	NA	NA	-20	104	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.7295621116176	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACGGTGCTGGTTTAGG	NA	False	NA	NA	False	AATAAA	-21	NA	110581353	110601719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_110581670_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476
ES.37250.1	chrX	-	1255	1	FSM	ENSMUSG00000081221.5	ENSMUST00000121831.2	999	1	-71	-185	-71	185	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAACAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	79238529	79237274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_79237300_79238500
ES.37251.1	chrX	+	1509	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-54	-387	-54	387	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	79500293	79501802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_79500300_79501800
ES.37251.2	chrX	+	1879	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-54	-757	-54	757	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTAATAATGGTCAA	NA	False	NA	NA	False	AAAAAG	-28	NA	79500293	79502172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_79500300_79502200
ES.37251.3	chrX	+	1598	2	Genic_Genomic	ENSMUSG00000081205.5	novel	1068	1	NA	NA	-54	698	multi-exon	FALSE	non_canonical	0	0	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	NA	False	NA	NA	False	AATAAA	-23	NA	79500293	79502113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_79500991_79501212
ES.37251.4	chrX	+	646	2	Genic_Genomic	ENSMUSG00000081205.5	novel	1068	1	NA	NA	-41	385	multi-exon	FALSE	canonical	0	0	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATTTGTGTAGTTCAG	NA	False	NA	NA	False	NA	NA	NA	79500306	79501800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_79500543_79501390
ES.37251.5	chrX	+	800	2	Genic_Genomic	ENSMUSG00000081205.5	novel	1068	1	NA	NA	326	387	multi-exon	FALSE	canonical	2	69	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTAGTTCAGTT	NA	False	NA	NA	False	NA	NA	NA	79500673	79501802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_79500994_79501322
ES.37252.1	chrX	+	3994	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-260	273	-242	-273	multi-exon	TRUE	canonical	3	148	junction_2	10.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTCTTTCCTGCTATTC	NA	False	NA	14	True	AATAAA	-27	NA	80114061	80141205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.10	chrX	+	4004	4	NNC	ENSMUSG00000025666.17	novel	4007	3	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_3	75.2078601093145	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTACTTTGTGTCTTC	NA	False	NA	18	True	ATTAAA	-24	NA	80114282	80141478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_80114767_80127896_80128038_80138057_80139876_80139917
ES.37252.11	chrX	+	3411	3	FSM	ENSMUSG00000025666.17	ENSMUST00000150052.2	586	3	-8	-2817	-8	-279	multi-exon	FALSE	canonical	1	1	junction_1	73.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAATAGTTTCTTTCCTG	NA	False	NA	8	True	AATAAA	-21	NA	80114295	80141199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114424_80127896_80128038_80138057
ES.37252.12	chrX	+	4194	4	NNC	ENSMUSG00000025666.17	novel	4007	3	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_2	78.7414898399962	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGCTCTTACTTTGTG	NA	False	NA	13	True	ATTAAA	-19	NA	80114317	80141473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_80114767_80127896_80128038_80136222_80136411_80138057
ES.37252.13	chrX	+	3733	3	NNC	ENSMUSG00000025666.17	novel	4007	3	NA	NA	0	-280	intron_retention	FALSE	non_canonical	0	0	junction_2	84.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAATAGTTTCTTTCCT	NA	False	NA	7	True	AATAAA	-20	NA	80114321	80141198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_80114767_80127896_80128038_80138051
ES.37252.2	chrX	+	4271	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-156	-108	-138	108	multi-exon	FALSE	canonical	3	148	junction_2	10.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAAATGTGTATAGTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	80114165	80141586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.3	chrX	+	2122	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-89	1974	-71	167	multi-exon	FALSE	canonical	3	148	junction_2	10.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAAGTCTCAGTAGATG	NA	False	NA	NA	False	AATAAA	-27	NA	80114232	80139504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.4	chrX	+	4092	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-85	0	-67	0	multi-exon	FALSE	canonical	3	148	junction_2	10.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTACTTTGTGTCTTC	NA	False	NA	18	True	ATTAAA	-24	NA	80114236	80141478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.5	chrX	+	3695	6	NNC	ENSMUSG00000025666.17	novel	4007	3	NA	NA	-57	-286	intron_retention	TRUE	non_canonical	0	0	junction_3	67.5011111019663	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATGATAATAGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	80114246	80141192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_80114767_80127896_80128038_80133568_80133902_80138057_80139695_80139981_80140295_80140441
ES.37252.6	chrX	+	2672	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-64	1399	-46	742	multi-exon	FALSE	canonical	3	148	junction_2	10.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATACCTTATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	80114257	80140079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.7	chrX	+	1927	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	-57	2137	-39	4	multi-exon	FALSE	canonical	3	148	junction_2	10.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTAATGATTCTTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	80114264	80139341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114767_80127896_80128038_80138057
ES.37252.8	chrX	+	3707	3	FSM	ENSMUSG00000025666.17	ENSMUST00000150052.2	586	3	-30	-3091	-30	-5	multi-exon	FALSE	canonical	1	1	junction_1	73.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGCTCTTACTTTGTG	NA	False	NA	13	True	ATTAAA	-19	NA	80114273	80141473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_80114424_80127896_80128038_80138057
ES.37252.9	chrX	+	3688	4	NNC	ENSMUSG00000025666.17	novel	4007	3	NA	NA	-25	-284	intron_retention	FALSE	non_canonical	0	0	junction_3	75.2078601093145	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGATAATAGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	80114278	80141194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_80114767_80127896_80128038_80138057_80140930_80141007
ES.37253.1	chrX	-	1334	1	Intergenic	novelGene_30456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAAGGGGTTAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	80154036	80152702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_80152700_80154000
ES.37254.1	chrX	-	202	1	Intergenic	novelGene_30457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTATGTCCTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	80418740	80418538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_80418500_80418700
ES.37255.1	chrX	+	3622	3	Intergenic	novelGene_30458	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	81287170	81291433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_81287643_81287687_81288158_81288753
ES.37256.1	chrX	+	132	1	Intergenic	novelGene_30459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81968269	81968401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_81968300_81968400
ES.37257.1	chrX	+	156	1	Intergenic	novelGene_30460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81985920	81986076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_81985900_81986100
ES.37258.1	chrX	+	182	1	Intergenic	novelGene_30461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTCATCACATTT	NA	False	NA	NA	False	NA	NA	NA	82740074	82740256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_82740100_82740300
ES.37259.1	chrX	-	5329	1	Intergenic	novelGene_30462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTTCCTGACTATGT	NA	False	NA	NA	False	NA	NA	NA	83432038	83426709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_83426700_83432000
ES.3726.1	chr10	-	2004	1	Antisense	novelGene_ENSMUSG00000020185.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCCAGTATCTCTTA	NA	False	NA	NA	False	NA	NA	NA	110615628	110613624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_110613600_110615600
ES.37260.1	chrX	-	986	4	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	58.9481881730803	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAAAGTAACTCTGA	1101	False	NA	NA	False	AATAAA	-10	NA	83486775	83445458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83445961_83459197_83459397_83473568_83473652_83486573
ES.37260.10	chrX	-	362	2	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	127	junction_1	0	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTGTACCACTCAACCT	1166	False	NA	NA	False	AATAAA	-14	NA	83486710	83473426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83473652_83486573
ES.37260.2	chrX	-	2198	4	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	51.8737784327389	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAGAAAAAA	1145	False	NA	NA	False	AATATA	-4	NA	83486731	83456971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83458730_83459197_83459397_83473568_83473652_83486573
ES.37260.3	chrX	-	3447	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAAGGGTTCTTCTTT	1175	False	NA	-13	True	AATAAA	-13	NA	83486701	83458140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83461377_83473568_83473652_83486573
ES.37260.4	chrX	-	981	4	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	51.8737784327389	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGCTTCAAGGGTT	1186	False	NA	-20	True	AATAAA	-6	NA	83486690	83458147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83458730_83459197_83459397_83473568_83473652_83486573
ES.37260.5	chrX	-	3612	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGTTTAACAGTGGGT	1186	False	NA	NA	False	ATTAAA	-14	NA	83486690	83466625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83470038_83473568_83473652_83486573
ES.37260.6	chrX	-	3129	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATCTGTGGTTTTTGCAT	1164	False	NA	4	True	NA	NA	NA	83486712	83467130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83470038_83473568_83473652_83486573
ES.37260.7	chrX	-	1662	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGATCTGTGGTTTTT	1139	False	NA	0	True	NA	NA	NA	83486737	83467134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83468550_83473568_83473652_83486573
ES.37260.8	chrX	-	2102	1	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGTAA	NA	False	NA	NA	False	NA	NA	NA	83469902	83467800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83467800_83469900
ES.37260.9	chrX	-	317	3	Antisense	novelGene_ENSMUSG00000045103.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	63.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGGCATGCATCAGT	1187	False	NA	NA	False	NA	NA	NA	83486689	83468431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_83468550_83473568_83473652_83486573
ES.37261.1	chrX	+	4581	17	NNC	ENSMUSG00000045103.20	novel	596	4	NA	NA	-4472	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	81.0113562641066	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTGGTTGGACTGTAG	NA	False	NA	20	True	AATAAA	-26	NA	84087428	84248655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84087641_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.11	chrX	+	4459	16	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	87.5680306961393	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATACCTATTGGT	NA	False	NA	10	True	AATAAA	-16	NA	84091926	84248645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.12	chrX	+	4425	16	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	84.2565922247828	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84091926	84248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.13	chrX	+	4370	15	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	81.4824383232488	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091926	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.14	chrX	+	6155	11	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	82.5458054658139	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091926	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84182933_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.16	chrX	+	2782	16	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	4	85	intron_retention	FALSE	canonical	3	247	junction_12	44.3287716951417	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCCGCATGGTTTTTA	NA	False	NA	4	True	AATAAA	-15	NA	84091931	84246189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.17	chrX	+	4465	17	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	85.0131423663424	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84091933	84248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183073_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.18	chrX	+	4347	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	6	-144	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGTAACATTTACTAA	NA	False	NA	NA	False	AATAGA	-16	NA	84091933	84248501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.19	chrX	+	4487	17	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	85.5080177161768	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84091934	84248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222433_84234224_84234309_84246076
ES.37261.2	chrX	+	4591	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-54	4	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTTGGACTGTAGTAG	NA	False	NA	23	True	AATAAA	-29	NA	84091846	84248658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.21	chrX	+	4426	16	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	79.4135728673352	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091945	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.22	chrX	+	2202	17	NNC	ENSMUSG00000045103.20	novel	596	4	NA	NA	213	85	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	80.3716951109033	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCCGCATGGTTTTTA	NA	False	NA	4	True	AATAAA	-15	NA	84092231	84246189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092531_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.23	chrX	+	4665	17	NNC	ENSMUSG00000045103.20	novel	596	4	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	80.3716951109033	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84092233	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092531_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.24	chrX	+	4303	15	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	41398	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_11	33.7938679378979	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATACCTATTGGT	NA	False	NA	10	True	AATAAA	-16	NA	84133416	84248645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.25	chrX	+	4135	13	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	56761	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	87.6613987644125	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84148779	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.26	chrX	+	2558	12	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	61561	857	combination_of_known_junctions	FALSE	canonical	3	247	junction_8	28.2117143478783	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACAACTAAATTGTTC	NA	False	NA	NA	False	TATAAA	-9	NA	84153579	84247300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.27	chrX	+	3805	12	NNC	ENSMUSG00000045103.20	novel	596	4	NA	NA	-44110	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.470330252163	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84177431	84248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84177459_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.28	chrX	+	4017	8	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-35836	48	intron_retention	FALSE	canonical	3	247	junction_4	19.5875845725744	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGTGCTTTATAAAAAA	NA	False	NA	NA	False	TATAAA	-16	NA	84185705	84246491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.29	chrX	+	6758	8	ISM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	97321	-9	-32202	0	3prime_fragment	FALSE	canonical	2	3	junction_6	121.063990500555	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84189339	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84241109_84241142_84246076
ES.37261.3	chrX	+	3127	16	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-12	48	intron_retention	FALSE	canonical	3	247	junction_12	44.3287716951417	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGTGCTTTATAAAAAA	NA	False	NA	NA	False	TATAAA	-16	NA	84091888	84246491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.30	chrX	+	6185	7	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-31661	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_3	21.1456588662753	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84189880	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.31	chrX	+	3140	7	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-31079	87	combination_of_known_junctions	FALSE	canonical	3	247	junction_3	21.1456588662753	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCGCATGGTTTTTATA	NA	False	NA	6	True	AATAAA	-17	NA	84190462	84246191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.32	chrX	+	6824	1	Intergenic	novelGene_30464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATAATTGTATTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	84198202	84205026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_84198200_84205000
ES.37261.33	chrX	+	3741	2	NNC	ENSMUSG00000045103.20	novel	4179	13	NA	NA	-5035	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84216506	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84218205_84246611
ES.37261.34	chrX	+	3076	1	Intergenic	novelGene_30465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAACTCATAACGGTAT	NA	False	NA	NA	False	NA	NA	NA	84217279	84220355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_84217300_84220400
ES.37261.35	chrX	+	3034	4	FSM	ENSMUSG00000045103.20	ENSMUST00000123308.2	596	4	-234	-2204	-234	2	multi-exon	FALSE	canonical	3	249	junction_3	25.0377492776186	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACCTATTGGTTG	NA	False	NA	12	True	AATAAA	-18	NA	84221307	84248647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.4	chrX	+	2085	17	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-11	85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	85.0131423663424	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCCGCATGGTTTTTA	NA	False	NA	4	True	AATAAA	-15	NA	84091889	84246189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183107_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.5	chrX	+	2368	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-3	43	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAAGTGTGCTTTATA	NA	False	NA	NA	False	TATAAA	-11	NA	84091897	84246486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37261.6	chrX	+	1767	14	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	9	17004	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	93.2551377140111	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTATATAATTGTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	84091909	84205023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84204741
ES.37261.7	chrX	+	4552	18	FSM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	-105	-9	-11	0	multi-exon	FALSE	canonical	2	3	junction_16	104.727393692478	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091913	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84241109_84241142_84246076
ES.37261.8	chrX	+	4412	16	NNC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	112.096387096106	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTATTGGTTGGACTGTA	NA	False	NA	19	True	AATAAA	-25	NA	84091922	84248654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185337_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84246076
ES.37261.9	chrX	+	2046	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	-1	86	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCGCATGGTTTTTAT	NA	False	NA	5	True	AATAAA	-16	NA	84091923	84246190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ES.37262.1	chrX	-	7444	1	Intergenic	novelGene_30463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATCAATAAGAGAAACAAA	NA	False	NA	NA	False	TTTAAA	-41	NA	84165006	84157562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_84157600_84165000
ES.37263.1	chrX	+	915	1	NIC	ENSMUSG00000035491.6	novel	835	2	NA	NA	19693	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGCGCTTCAGTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	84312977	84313892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84313000_84313900
ES.37264.1	chrX	+	6630	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-310	-147	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTATGTTGTGAA	NA	False	NA	32	True	ATTAAA	-44	NA	84617317	84677928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.10	chrX	+	6599	11	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	-175	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	46.4935479394722	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTGTACATACCATG	NA	False	NA	4	True	ATTAAA	-16	NA	84617570	84677900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617929_84619155_84619217_84625752_84625846_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.11	chrX	+	6682	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-56	2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31.1840415027373	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCATCTTTTCTGTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	84617571	84678077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617929_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.12	chrX	+	6523	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-56	-157	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31.1840415027373	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTAGATTTCTGTGT	NA	False	NA	22	True	ATTAAA	-34	NA	84617571	84677918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617929_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.13	chrX	+	6203	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-55	-155	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	36.8604649665603	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTAGATTTCTGTGTAT	NA	False	NA	24	True	ATTAAA	-36	NA	84617572	84677920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.14	chrX	+	5283	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-51	1132	-51	-1132	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAAAATTTAGAGGTCTTA	NA	False	NA	NA	False	NA	NA	NA	84617576	84676943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.15	chrX	+	3561	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-46	-2952	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGCCGTAGTCCTA	NA	False	NA	NA	False	AATACA	-22	NA	84617581	84675123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.16	chrX	+	6449	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-45	-2	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	33.7618034915198	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	84617582	84678073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.17	chrX	+	6396	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-41	-166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	37.5998670210414	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACCATGTCTCTTAGA	NA	False	NA	13	True	ATTAAA	-25	NA	84617586	84677909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617929_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.19	chrX	+	6479	10	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-31	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.5390659428521	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTACATTCTGCATC	NA	False	NA	NA	False	AATAAA	-16	NA	84617596	84678066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617772_84619155_84619217_84625752_84625846_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.2	chrX	+	6642	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-175	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	84617452	84678075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.20	chrX	+	6473	10	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-24	-165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.3365864793269	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCATGTCTCTTAGAT	NA	False	NA	14	True	ATTAAA	-26	NA	84617603	84677910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617929_84619155_84619217_84625752_84625846_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.22	chrX	+	6566	11	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	41.903341155569	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	84617619	84678073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617772_84619155_84619217_84625752_84625846_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.25	chrX	+	6071	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	2	-180	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	38.7140221393242	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATTAAATTTGTACATA	NA	False	NA	-1	True	ATTAAA	-11	NA	84617646	84677895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84667947_84668032_84671765_84671868_84674011
ES.37264.26	chrX	+	6380	11	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	2	-161	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	41.903341155569	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTCTTAGATTTCT	NA	False	NA	18	True	ATTAAA	-30	NA	84617646	84677914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617772_84619155_84619217_84625752_84625846_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.27	chrX	+	4179	4	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	17	-158	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	42.5910788780937	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCTTAGATTTCTGTG	NA	False	NA	21	True	ATTAAA	-33	NA	84617661	84677917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84619155_84619217_84671765_84671868_84674011
ES.37264.28	chrX	+	11904	8	NIC	ENSMUSG00000035476.10	novel	385	5	NA	NA	13851	-9	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	14.1968665700627	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTACATTCTGCATC	NA	False	NA	NA	False	AATAAA	-16	NA	84631606	84678066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.3	chrX	+	6364	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-162	162	-162	-162	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTCTCTTAGATTTC	NA	False	NA	17	True	ATTAAA	-29	NA	84617465	84677913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.4	chrX	+	6339	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-94	-161	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	33.7618034915198	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTCTTAGATTTCT	NA	False	NA	18	True	ATTAAA	-30	NA	84617533	84677914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.5	chrX	+	6606	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-86	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	37.5998670210414	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGCATCTTTTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	84617541	84678074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617929_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.6	chrX	+	6365	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-63	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	36.8604649665603	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCTGCATCTTTTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	84617564	84678074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_84617772_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.7	chrX	+	6362	10	NNC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-58	-170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.9542911405138	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACATACCATGTCTCT	NA	False	NA	9	True	ATTAAA	-21	NA	84617569	84677905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_84617772_84619155_84619224_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37264.9	chrX	+	6419	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	-57	2	-57	-2	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCTGCATCTTTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	84617570	84678073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ES.37265.1	chrX	+	173	1	Intergenic	novelGene_30466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	84813715	84813888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_84813700_84813900
ES.37266.1	chrX	-	4231	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	21	-7	8	7	multi-exon	TRUE	canonical	3	125	junction_19	13.2977827073068	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCTCTTTGTCTTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	84820222	84745535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.10	chrX	-	3551	20	NNC	ENSMUSG00000025059.17	novel	4245	20	NA	NA	2	-659	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.6658633903457	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820241	84746201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749930_84749972_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.11	chrX	-	3632	20	FSM	ENSMUSG00000025059.17	ENSMUST00000142152.2	4229	20	-62	659	-33	-659	multi-exon	FALSE	canonical	3	6	junction_16	53.7474343908722	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820292	84746201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.12	chrX	-	3851	2	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	68350	659	4188	-659	3prime_fragment	FALSE	canonical	3	146	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84751893	84746201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84748003_84749843
ES.37266.13	chrX	-	3681	22	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	318	-659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	60.3360581186495	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84819912	84746201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84819163_84819225_84819750
ES.37266.14	chrX	-	3644	20	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-15	-659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.6538800839387	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATTTCTCATTTCCA	NA	False	NA	-6	True	AATAAA	-18	NA	84820274	84746201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756992_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.15	chrX	-	3551	19	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-24	-660	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	36.8116661594134	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCATTTCTCATTTCC	NA	False	NA	-7	True	AATAAA	-17	NA	84820283	84746202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84820031
ES.37266.16	chrX	-	3453	18	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-33	-660	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	37.5564166164151	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCATTTCTCATTTCC	NA	False	NA	-7	True	AATAAA	-17	NA	84820292	84746202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84820031
ES.37266.17	chrX	-	3716	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-31	-660	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCATTTCTCATTTCC	NA	False	NA	-7	True	AATAAA	-17	NA	84820290	84746202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.19	chrX	-	7739	1	NIC	ENSMUSG00000025059.17	novel	4229	20	NA	NA	2139	-661	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGCATTTCTCATTTC	NA	False	NA	-8	True	AATAAA	-16	NA	84753942	84746203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84746200_84753900
ES.37266.2	chrX	-	3714	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	-26	652	-26	-652	multi-exon	FALSE	canonical	3	19	junction_1	33.6576812358314	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCATTTCCAGATGAAA	NA	False	NA	1	True	AATAAA	-25	NA	84820451	84746194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.21	chrX	-	3911	11	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	38486	686	-541	-686	intron_retention	FALSE	canonical	3	137	junction_8	8.96046873773911	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAATGTATCCCTT	NA	False	NA	-33	True	TATAAA	-42	NA	84781757	84746228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438
ES.37266.22	chrX	-	3229	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-44	1060	-28	-1060	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACTTTATAATTGTTTT	NA	False	NA	NA	False	AGTAAA	-13	NA	84820287	84746602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.23	chrX	-	2955	19	NNC	ENSMUSG00000025059.17	novel	4340	19	NA	NA	-33	-1265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.4646066968735	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAAGATGTTCTTATTT	NA	False	NA	NA	False	AATAAA	-32	NA	84820292	84746807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.24	chrX	-	3011	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	39	-1266	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAAGATGTTCTTATT	NA	False	NA	NA	False	AATAAA	-31	NA	84820191	84746808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.25	chrX	-	3164	21	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	1	-1277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	47.6833304205988	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATTACCCATTAATAAG	NA	False	NA	92	True	AATAAA	-20	NA	84820229	84746819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84811711_84811922_84820031
ES.37266.26	chrX	-	2993	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-41	1293	-25	-1293	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGCCTTTTAAATGTT	NA	False	NA	76	True	AATAAA	-4	NA	84820284	84746835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.28	chrX	-	5787	19	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	16	-1374	intron_retention	FALSE	canonical	3	125	junction_18	13.6106575888162	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTTTCCATATTTGA	NA	False	NA	-5	True	AATAAA	-15	NA	84820214	84746916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.29	chrX	-	2793	19	NIC	ENSMUSG00000025059.17	novel	4245	20	NA	NA	2	-1376	combination_of_known_splicesites	FALSE	canonical	1	2	junction_18	36.8116661594134	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATGTTTTCCATATTT	NA	False	NA	-7	True	AATAAA	-13	NA	84820241	84746918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84820031
ES.37266.3	chrX	-	6583	19	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-29	-652	intron_retention	FALSE	canonical	3	125	junction_18	13.6106575888162	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCATTTCCAGATGAAA	NA	False	NA	1	True	AATAAA	-25	NA	84820288	84746194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.31	chrX	-	2929	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	11	-1376	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATGTTTTCCATATTT	NA	False	NA	-7	True	AATAAA	-13	NA	84820219	84746918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.32	chrX	-	2950	21	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	2	-1377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	54.6180144274762	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGATGTTTTCCATATT	NA	False	NA	-8	True	AATAAA	-12	NA	84820228	84746919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.33	chrX	-	2609	18	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-6	-1490	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	50.9662348366603	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTATACTCTACCAT	NA	False	NA	NA	False	ATTAAA	-26	NA	84820265	84747032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84820031
ES.37266.34	chrX	-	1994	21	NIC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	51	-2271	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTCCAGAAACATTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84820179	84747813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.35	chrX	-	1959	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	15	2271	2	-2271	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTCCAGAAACATTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84820228	84747813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.36	chrX	-	1939	19	NNC	ENSMUSG00000025059.17	novel	4340	19	NA	NA	-27	-2275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.4646066968735	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATCCTCCAGAAACAT	NA	False	NA	NA	False	AATAAA	-14	NA	84820286	84747817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.37	chrX	-	1978	20	NNC	ENSMUSG00000025059.17	novel	4245	20	NA	NA	3	-2277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.6776781920874	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAATCCTCCAGAAAC	NA	False	NA	NA	False	AATAAA	-12	NA	84820240	84747819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.38	chrX	-	3887	19	NIC	ENSMUSG00000025059.17	novel	4245	20	NA	NA	94	2106	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	37.4737768395085	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTATTGTCCTGAGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	84820136	84748495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84750792_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.39	chrX	-	6609	18	ISM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	206	4179	11	880	5prime_fragment	FALSE	canonical	3	125	junction_17	13.834163619279	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAGGCTCAATTAGTT	NA	False	NA	NA	False	NA	NA	NA	84820219	84749721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.4	chrX	-	3648	20	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	-27	-653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.6776781920874	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTCATTTCCAGATGAA	NA	False	NA	0	True	AATAAA	-24	NA	84820286	84746195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.40	chrX	-	1871	19	NIC	ENSMUSG00000025059.17	novel	778	8	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	37.4737768395085	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTGTTTCAGCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	84820228	84750603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84750792_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.41	chrX	-	4444	18	NNC	ENSMUSG00000025059.17	novel	4340	19	NA	NA	5	-1318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.7615369587539	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTAATAATATGAATTATA	NA	False	NA	NA	False	ATTAAA	-16	NA	84820238	84751919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84754738_84755947_84756106_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.42	chrX	-	4526	19	ISM	ENSMUSG00000025059.17	ENSMUST00000142152.2	4229	20	-22	6379	7	-1320	5prime_fragment	FALSE	canonical	3	6	junction_15	48.1078071742115	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCTAATAATATGAATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	84820252	84751921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.43	chrX	-	4469	18	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-37	6380	-21	-1321	5prime_fragment	FALSE	canonical	3	125	junction_17	13.834163619279	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCTAATAATATGAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	84820280	84751922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.44	chrX	-	1997	18	ISM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	1	8814	1	1644	5prime_fragment	FALSE	canonical	3	125	junction_17	13.834163619279	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCAACTAGACT	NA	False	NA	NA	False	AGTAAA	-25	NA	84820242	84754356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.45	chrX	-	1978	18	NNC	ENSMUSG00000025059.17	novel	4340	19	NA	NA	2	1611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.9047248517908	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAAAATTATTTCTGG	NA	False	NA	NA	False	AATGAA	-15	NA	84820241	84754389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783983_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.5	chrX	-	3702	21	NNC	ENSMUSG00000025059.17	novel	4279	21	NA	NA	2	-654	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	54.6180144274762	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTCATTTCCAGATGA	NA	False	NA	-1	True	AATAAA	-23	NA	84820257	84746196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780969_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.6	chrX	-	2728	8	NNC	ENSMUSG00000025059.17	novel	4340	19	NA	NA	-2743	-658	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	63.6819264399409	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84760807	84746200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84760488
ES.37266.7	chrX	-	3753	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	-166	658	16	-658	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820409	84746200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ES.37266.8	chrX	-	3466	19	NIC	ENSMUSG00000025059.17	novel	4245	20	NA	NA	11	-658	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	56.9582097183627	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820219	84746200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84820031
ES.37267.1	chrX	+	180	1	Intergenic	novelGene_30467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTACTATGTTA	NA	False	NA	NA	False	NA	NA	NA	84958295	84958475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_84958300_84958500
ES.37268.1	chrX	+	1929	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	-118	-3	-118	3	multi-exon	FALSE	canonical	3	839	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGAGTTTTCTTGGGG	NA	False	NA	14	True	AATAAA	-26	NA	85235251	85239556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_85236581_85238956
ES.37268.2	chrX	+	1762	3	NNC	ENSMUSG00000025056.5	novel	1808	2	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	419.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGGACTGGAGAGTTTT	NA	False	NA	7	True	AATAAA	-44	NA	85235378	85239549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_85236581_85238956_85239316_85239348
ES.37268.3	chrX	+	1785	2	NNC	ENSMUSG00000025056.5	novel	1808	2	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTAAACGGACTGGAGAGT	NA	False	NA	4	True	AATAAA	-41	NA	85235378	85239546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_85236574_85238956
ES.37268.4	chrX	+	4173	1	NIC	ENSMUSG00000025056.5	novel	1808	2	NA	NA	11	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85235380	85239553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_85235400_85239600
ES.37269.1	chrX	-	2440	3	FSM	ENSMUSG00000035427.19	ENSMUST00000113969.10	2403	3	-32	-5	-32	5	multi-exon	FALSE	canonical	3	26	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTATTCTTTGCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	85299857	85293854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_85296089_85298945_85299028_85299733
ES.37269.2	chrX	-	2810	9	NNC	ENSMUSG00000035427.19	novel	2403	3	NA	NA	-5	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	15.4171171105366	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTTATTCTTTGCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	85348704	85293854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_85294720_85294806_85296089_85298945_85299028_85299733_85299937_85302352_85302430_85329448_85329525_85338668_85338715_85347819_85347902_85348607
ES.37269.3	chrX	-	2216	4	NNC	ENSMUSG00000035427.19	novel	2403	3	NA	NA	-34	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.589211407093	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGAGATTTTATTCT	NA	False	NA	NA	False	AATAAA	-10	NA	85299859	85293861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_85294575_85294793_85296089_85298945_85299028_85299733
ES.37269.4	chrX	-	2206	4	NNC	ENSMUSG00000035427.19	novel	2403	3	NA	NA	-32	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.589211407093	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAAAGAGATTTTA	NA	False	NA	NA	False	AATAAA	-6	NA	85299857	85293865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_85294498_85294720_85296089_85298945_85299028_85299733
ES.37269.5	chrX	-	2185	3	NNC	ENSMUSG00000035427.19	novel	2401	3	NA	NA	-49	-49172	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGAGATTTTATTCT	NA	False	NA	NA	False	AATAAA	-10	NA	85348748	85343033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_85344996_85347819_85347902_85348607
ES.3727.1	chr10	+	426	1	Intergenic	novelGene_2838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACCAAACAAACAAAAAACA	3913	False	NA	NA	False	NA	NA	NA	110692113	110692539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_110692100_110692500
ES.37270.1	chrX	-	1596	2	Genic_Genomic	ENSMUSG00000080069.3	novel	1023	1	NA	NA	-9169	449	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCAGACTTTACTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	85398620	85387979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_85389457_85398501
ES.37270.2	chrX	-	1573	2	Genic_Genomic	ENSMUSG00000080069.3	novel	1023	1	NA	NA	-9161	378	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACAATGACTCAGATGT	NA	False	NA	NA	False	NA	NA	NA	85398612	85388050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_85389513_85398501
ES.37271.1	chrX	-	1454	2	Intergenic	novelGene_30468	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGAGGAAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	86127901	85941161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_85942345_86127630
ES.37272.1	chrX	-	194	1	Intergenic	novelGene_30469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAGTACAGTGATTT	NA	False	NA	NA	False	NA	NA	NA	86194543	86194349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_86194300_86194500
ES.37273.1	chrX	+	169	1	Intergenic	novelGene_30470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTGTAACATATG	NA	False	NA	NA	False	NA	NA	NA	86204584	86204753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_86204600_86204800
ES.37274.1	chrX	+	168	1	Intergenic	novelGene_30471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	87113244	87113412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_87113200_87113400
ES.37275.1	chrX	-	368	1	Intergenic	novelGene_30472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87627277	87626909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_87626900_87627300
ES.37276.1	chrX	-	6989	1	Intergenic	novelGene_30473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAAGATAAGGTATTTAG	NA	False	NA	NA	False	AGTAAA	-35	NA	87646476	87639487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_87639500_87646500
ES.37277.1	chrX	+	206	1	Intergenic	novelGene_30474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCAGCGCTGCTTTTCC	NA	False	NA	NA	False	AAGAAA	-7	NA	87877894	87878100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_87877900_87878100
ES.37278.1	chrX	-	6701	1	Intergenic	novelGene_30475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGGGTACAGATCTAAA	NA	False	NA	NA	False	NA	NA	NA	87936591	87929890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_87929900_87936600
ES.37279.1	chrX	-	179	1	Intergenic	novelGene_30476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCCTACCATA	NA	False	NA	NA	False	NA	NA	NA	87966902	87966723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_87966700_87966900
ES.3728.1	chr10	+	1086	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	188	110	188	-2	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCTTTCAGAGGAGC	NA	False	NA	29	True	AATAAA	-30	NA	110755837	110775373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ES.3728.2	chr10	+	906	5	ISM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	12050	128	211	-20	3prime_fragment	FALSE	canonical	3	202	junction_1	3.56195171219375	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGGTACCACCTCTTAA	NA	False	NA	11	True	AATAAA	-12	NA	110767699	110775355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ES.3728.3	chr10	+	1052	2	ISM	ENSMUSG00000020186.8	ENSMUST00000220301.2	720	5	3024	-2	3024	2	intron_retention	FALSE	canonical	3	212	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCAGAGGAGCTGTT	NA	False	NA	33	True	AATAAA	-34	NA	110773555	110775377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_110773728_110774497
ES.37280.1	chrX	-	169	1	Intergenic	novelGene_30477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAATCTGGTTATACT	NA	False	NA	NA	False	NA	NA	NA	87975243	87975074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_87975100_87975200
ES.37281.1	chrX	+	634	2	Intergenic	novelGene_30478	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTCTTTCTGGTTGTG	NA	False	NA	12	True	NA	NA	NA	88052001	88080609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_88052327_88080300
ES.37281.2	chrX	+	8270	2	Intergenic	novelGene_30479	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTATTGTTTCTTTATAG	NA	False	NA	NA	False	AATAAA	-22	NA	88052079	88069168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_88054874_88063692
ES.37282.1	chrX	-	7707	2	Intergenic	novelGene_30480	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCAGCTTTTTTGCCCC	NA	False	NA	NA	False	NA	NA	NA	88069472	88052948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_88054877_88063693
ES.37283.1	chrX	-	4461	11	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-54	0	intron_retention	FALSE	canonical	0	0	junction_3	1.04403065089105	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTCTTTTAATGTG	NA	False	NA	NA	False	AAGAAA	-44	NA	88453349	88447453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450898_88451066_88451172_88451245_88451506_88451655_88451746_88452154_88452396_88452547_88452655_88452806_88452945_88453058_88453150
ES.37283.10	chrX	-	4265	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-79	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.31110955471418	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88453374	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451245_88451506_88451655_88451746_88451836_88452065_88452151_88452379_88452547_88452638_88452806_88452945_88453058_88453150
ES.37283.11	chrX	-	3949	10	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	458	-21	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	0.942809041582063	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88452837	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451172_88451245_88451489_88451655_88451746_88451836_88452081_88452154_88452379_88452547_88452638
ES.37283.12	chrX	-	4227	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-78	-21	intron_retention	FALSE	canonical	0	0	junction_1	1.21287855128421	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88453373	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88449904_88449992_88450144_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451242_88451506_88451655_88451746_88452154_88452396_88452547_88452655_88452806_88452945_88453058_88453150
ES.37283.13	chrX	-	4169	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-14	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.13545418152698	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88453309	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451245_88451506_88451655_88451746_88451836_88452065_88452154_88452396_88452547_88452655_88452806_88452945_88453058_88453150
ES.37283.2	chrX	-	4591	10	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-79	0	intron_retention	FALSE	canonical	0	0	junction_4	1.39664500999739	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTCTTTTAATGTG	NA	False	NA	NA	False	AAGAAA	-44	NA	88453374	88447453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451242_88451506_88452154_88452396_88452547_88452638_88452806_88452945_88453058_88453150
ES.37283.3	chrX	-	4230	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.16420440680597	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTCTTTTAATGTG	NA	False	NA	NA	False	AAGAAA	-44	NA	88453348	88447453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451245_88451506_88451655_88451746_88451836_88452081_88452154_88452396_88452547_88452638_88452806_88452945_88453058_88453150
ES.37283.4	chrX	-	5660	3	NIC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-54	-3	intron_retention	FALSE	canonical	2	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGTTTTCTTTTAAT	NA	False	NA	NA	False	AAGAAA	-41	NA	88453349	88447456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_88452806_88452945_88453058_88453150
ES.37283.5	chrX	-	4166	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.13545418152698	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGTTTTCTTTTAAT	NA	False	NA	NA	False	AAGAAA	-41	NA	88453311	88447456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450687_88450915_88451066_88451172_88451240_88451489_88451655_88451746_88451836_88452081_88452154_88452396_88452547_88452655_88452806_88452945_88453058_88453150
ES.37283.6	chrX	-	4222	12	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.02851895445316	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTGTTTTCTTTTAAT	NA	False	NA	NA	False	AAGAAA	-41	NA	88453342	88447456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451172_88451245_88451489_88451655_88451746_88451836_88452081_88452154_88452396_88452547_88452638_88452806_88452945_88453058_88453150
ES.37283.7	chrX	-	3509	7	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	1460	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	0.816496580927726	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGGTGTTTTCTTTT	NA	False	NA	NA	False	AAGAAA	-38	NA	88451835	88447459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451172_88451245_88451489_88451655_88451763
ES.37283.8	chrX	-	4146	10	NNC	ENSMUSG00000035395.12	novel	4182	12	NA	NA	459	-21	intron_retention	FALSE	canonical	0	0	junction_1	1.49897084035912	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88452836	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450374_88450515_88450602_88450690_88450915_88451066_88451172_88451290_88451489_88451655_88451746_88452154_88452396_88452547_88452638_88452725_88452805
ES.37283.9	chrX	-	3959	10	NNC	ENSMUSG00000035395.12	novel	4183	12	NA	NA	446	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.13311544746506	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAACAAACA	NA	False	NA	NA	False	AAGAAA	-23	NA	88452849	88447474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_88450288_88450379_88450515_88450602_88450690_88450915_88451066_88451156_88451245_88451506_88451655_88451746_88451836_88452065_88452154_88452379_88452547_88452655
ES.37284.1	chrX	+	178	1	Intergenic	novelGene_30481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATATGAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	88926737	88926915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_88926700_88926900
ES.37285.1	chrX	+	3066	1	Intergenic	novelGene_30482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89730347	89733413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_89730300_89733400
ES.37286.1	chrX	+	2784	1	Intergenic	novelGene_30483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACATTGTTATTGT	NA	False	NA	NA	False	AATAAA	-11	NA	89818748	89821532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_89818700_89821500
ES.37286.2	chrX	+	2566	1	Intergenic	novelGene_30484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTCTCTCTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	89818789	89821355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_89818800_89821400
ES.37287.1	chrX	+	231	1	Intergenic	novelGene_30485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCATTAGTTTTACAAT	NA	False	NA	NA	False	AATAAA	-28	NA	89904571	89904802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_89904600_89904800
ES.37288.1	chrX	+	1322	2	Genic_Genomic	ENSMUSG00000091497.2	novel	993	1	NA	NA	-13771	209	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTTCATTTATTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	89921976	89936949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_89922040_89935690
ES.37289.1	chrX	+	175	1	Intergenic	novelGene_30486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAGAAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	90034792	90034967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_90034800_90035000
ES.3729.1	chr10	-	4753	17	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-130	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	8.47030659126339	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCAGTTCA	NA	False	NA	0	True	AATAAA	-15	NA	110846131	110777639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.10	chr10	-	4594	18	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-6	-3	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	9.90473655522315	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAATGTGGTGTCTGCTC	NA	False	NA	-6	True	AATAAA	-9	NA	110845870	110777645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110798157_110798266_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.11	chr10	-	2739	17	NNC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-14	-951	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	10.8137643769411	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTAATGCAAAATTCTT	NA	False	NA	NA	False	TTTAAA	-39	NA	110845878	110779392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803667_110804289_110804388_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.12	chr10	-	2960	4	FSM	ENSMUSG00000035798.15	ENSMUST00000218981.2	564	4	-219	-2177	-56	1754	multi-exon	FALSE	canonical	3	18	junction_1	7.76029781788188	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGCTAAAATCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	110846057	110807808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.13	chr10	-	745	2	ISM	ENSMUSG00000035798.15	ENSMUST00000218981.2	564	4	-221	11435	-58	-11435	5prime_fragment	FALSE	canonical	3	37	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110846059	110821420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_110821905_110845798
ES.3729.2	chr10	-	4559	18	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-6	1	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	10.5147778689432	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCAGTTCA	NA	False	NA	0	True	AATAAA	-15	NA	110845870	110777639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110798157_110798266_110803544_110803667_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.3	chr10	-	4888	12	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-621	1	intron_retention	FALSE	non_canonical	0	0	junction_6	11.3385176928501	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGCTCAGTTCA	NA	False	NA	0	True	AATAAA	-15	NA	110804328	110777639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110798157_110798266_110803544_110803667_110804289
ES.3729.4	chr10	-	4450	15	NNC	ENSMUSG00000035798.15	novel	5497	16	NA	NA	-12937	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	10.2481954608644	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTCTGCTCAGT	NA	False	NA	-3	True	AATAAA	-12	NA	110816644	110777642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110816384
ES.3729.6	chr10	-	4731	19	NNC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	12.0052714758924	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTCTGCTCAGT	NA	False	NA	-3	True	AATAAA	-12	NA	110845870	110777642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110791164_110791299_110792146_110792290_110796872_110796999_110798157_110798266_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.7	chr10	-	6492	3	NIC	ENSMUSG00000035798.15	novel	5497	16	NA	NA	-2153	0	intron_retention	FALSE	canonical	3	27	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTGTCTGCTCAGT	NA	False	NA	-3	True	AATAAA	-12	NA	110785711	110777642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110781425_110782027_110782186_110783159
ES.3729.8	chr10	-	5560	16	NIC	ENSMUSG00000035798.15	novel	3635	17	NA	NA	-175	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	9.73972392946649	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTGGTGTCTGCTCA	NA	False	NA	-5	True	AATAAA	-10	NA	110846176	110777644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803667_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.3729.9	chr10	-	4446	17	FSM	ENSMUSG00000035798.15	ENSMUST00000220247.2	3635	17	-14	-797	-6	-2	multi-exon	FALSE	non_canonical	0	0	junction_7	9.44370656839781	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGTGGTGTCTGCTCA	NA	False	NA	-5	True	AATAAA	-10	NA	110845870	110777644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803667_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ES.37290.1	chrX	+	201	1	Intergenic	novelGene_30487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGAGCCGTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	90385407	90385608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_90385400_90385600
ES.37291.1	chrX	+	1648	3	Genic_Genomic	ENSMUSG00000096072.2	novel	1035	1	NA	NA	-1350	470	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATCCAGTGTCTCTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	90522381	90525236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_90522413_90523542_90523599_90523675
ES.37292.1	chrX	+	1626	3	Genic_Genomic	ENSMUSG00000081960.4	novel	919	1	NA	NA	-1150	545	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAGAAAACAAGCAATCT	NA	False	NA	NA	False	AATAAA	-12	NA	90667850	90670464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_90667924_90668793_90668834_90668951
ES.37293.1	chrX	+	2593	2	Intergenic	novelGene_30488	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	90865066	90889230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_90867589_90889159
ES.37294.1	chrX	-	197	1	Intergenic	novelGene_30489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGAGCCGTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	91051024	91050827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_91050800_91051000
ES.37295.1	chrX	-	1589	3	Genic_Genomic	ENSMUSG00000062162.3	novel	993	1	NA	NA	-3141	456	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAATTCATTAGAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	91063080	91058340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_91059836_91059955_91059998_91063028
ES.37296.1	chrX	-	3359	1	Intergenic	novelGene_30490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	91115464	91112105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_91112100_91115500
ES.37297.1	chrX	-	1804	3	NNC	ENSMUSG00000067649.4	novel	2163	5	NA	NA	-231	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATGTTTACTAGTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	91164608	91162483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_91163124_91163231_91164295_91164507
ES.37298.1	chrX	-	178	1	Intergenic	novelGene_30491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	91166967	91166789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_91166800_91167000
ES.37299.1	chrX	+	177	1	Intergenic	novelGene_30492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGTGCTAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	91894820	91894997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_91894800_91895000
ES.373.1	chr1	+	1407	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	27	-16	-16	15	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACCTTTTAAAAAAGACA	NA	False	NA	30	True	AATAAA	-32	NA	42890419	42944858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.10	chr1	+	1462	11	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	209.926653857961	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890436	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938512_42938710_42942454_42942625_42944564
ES.373.11	chr1	+	1478	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	265.216892373016	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTCGCCCTTTTTTTT	NA	False	NA	10	True	AATAAA	-12	NA	42890436	42944838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42927014_42927123_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.12	chr1	+	1637	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	278.341175538223	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGCCCTTTTTTTTTAA	NA	False	NA	13	True	AATAAA	-15	NA	42890436	42944841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42927123_42934509_42934578_42935252_42935329_42937599_42937769_42938512_42938710_42942454_42942625_42944564
ES.373.13	chr1	+	1494	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	266.904755971733	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGCCCTTTTTTTTTAA	NA	False	NA	13	True	AATAAA	-15	NA	42890442	42944841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937400_42937528_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.14	chr1	+	3638	10	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	624	junction_3	44.6121834657333	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGCCCTTTTTTTTTAA	NA	False	NA	13	True	AATAAA	-15	NA	42890442	42944841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.15	chr1	+	5113	10	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	624	junction_3	26.1198566914186	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890442	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42942625_42944564
ES.373.18	chr1	+	4475	9	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-2	3	intron_retention	FALSE	canonical	3	624	junction_3	46.9574275274956	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTTTTTTTAAACCTT	NA	False	NA	18	True	AATAAA	-20	NA	42890442	42944846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42938710_42942454_42942625_42944564
ES.373.19	chr1	+	1293	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	200.714673517631	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGCCCTTTTTTTTTAA	NA	False	NA	13	True	AATAAA	-15	NA	42890445	42944841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564_42944707_42944777
ES.373.2	chr1	+	1844	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	32	-458	-11	457	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACACGTCCGTCATCT	NA	False	NA	NA	False	NA	NA	NA	42890424	42945300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.20	chr1	+	8163	10	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_7	287.170487496346	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890446	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42923527_42926866_42926947_42934509_42934578_42935252_42937769_42938512_42938710_42942454_42942625_42944564
ES.373.21	chr1	+	1432	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	264.389332251255	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGCCCTTTTTTTTTA	NA	False	NA	12	True	AATAAA	-14	NA	42890458	42944840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42923444_42923527_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.22	chr1	+	6909	5	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	3843	-2	intron_retention	FALSE	canonical	3	669	junction_2	45.3396901180412	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGCCCTTTTTTTTTA	NA	False	NA	12	True	AATAAA	-14	NA	42930739	42944840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42934578_42935252_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.23	chr1	+	3716	5	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	5440	-2	intron_retention	FALSE	canonical	3	669	junction_2	47.1937495861475	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGCCCTTTTTTTTTA	NA	False	NA	12	True	AATAAA	-14	NA	42932336	42944840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.24	chr1	+	3252	2	NIC	ENSMUSG00000060679.15	novel	1142	7	NA	NA	5752	-117	intron_retention	FALSE	canonical	3	678	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATTGACCTGTTACAT	NA	False	NA	NA	False	NA	NA	NA	42932648	42938171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42935329_42937599
ES.373.25	chr1	+	6911	2	ISM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	46708	-1	-5116	0	intron_retention	FALSE	canonical	3	669	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42937100	42944843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_42937769_42938600
ES.373.3	chr1	+	1074	9	ISM	ENSMUSG00000060679.15	ENSMUST00000185523.7	1867	10	-11	2328	-11	6	5prime_fragment	FALSE	canonical	3	624	junction_3	26.7161000147851	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTATTTTTCTAGGTA	NA	False	NA	NA	False	AATAAA	-17	NA	42890424	42938845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600
ES.373.4	chr1	+	3935	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_9	345.56648903953	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890424	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42923444_42923527_42926866_42926947_42927014_42927123_42934509_42934578_42935252_42937769_42938512_42938710_42942454_42942625_42944564
ES.373.5	chr1	+	1493	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	266.714382783289	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890424	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42936529_42936637_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.6	chr1	+	1504	12	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	266.714041934971	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGCCCTTTTTTTTTAA	NA	False	NA	13	True	AATAAA	-15	NA	42890425	42944841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937407_42937528_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.7	chr1	+	1572	11	NNC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	209.388538368269	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCGCCCTTTTTTTTTA	NA	False	NA	12	True	AATAAA	-14	NA	42890428	42944840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937407_42937769_42938600_42938710_42942454_42942625_42944564
ES.373.8	chr1	+	782	4	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	333.007841082192	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890432	42944842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_42890587_42901628_42901809_42942454_42942625_42944564
ES.373.9	chr1	+	7069	9	ISM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	41	-7	-2	6	intron_retention	FALSE	canonical	3	624	junction_3	26.7161000147851	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTAAACCTTTTA	NA	False	NA	21	True	AATAAA	-23	NA	42890433	42944849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600
ES.3730.1	chr10	-	236	1	Intergenic	novelGene_2839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCGGGTGTGTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	110880544	110880308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_110880300_110880500
ES.37300.1	chrX	+	154	1	Intergenic	novelGene_30493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92253042	92253196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92253000_92253200
ES.37301.1	chrX	+	2351	4	ISM	ENSMUSG00000035277.16	ENSMUST00000046565.13	2881	5	2143	6	2129	-6	3prime_fragment	FALSE	canonical	1	1	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGGAAGTGTGGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	92332244	92341957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_92333032_92335467_92335514_92338215_92338545_92340768
ES.37302.1	chrX	+	169	1	Intergenic	novelGene_30495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCATTATTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	92384937	92385106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92384900_92385100
ES.37303.1	chrX	+	7150	1	Antisense	novelGene_ENSMUSG00000006678.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAAGAACACCTCTTGAA	NA	False	NA	NA	False	ACTAAA	-29	NA	92631499	92638649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_92631500_92638600
ES.37304.1	chrX	+	3046	1	Intergenic	novelGene_30498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	92671263	92674309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92671300_92674300
ES.37305.1	chrX	-	5250	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-13	8	combination_of_known_splicesites	FALSE	canonical	3	18	junction_25	84.0379408969787	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	4264	False	NA	6	True	AATAAA	-27	NA	92675774	92348364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.10	chrX	-	5305	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-52	1	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	83.6951221361661	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4225	False	NA	-1	True	AATAAA	-20	NA	92675813	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.11	chrX	-	5381	32	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	153.246029225769	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4278	False	NA	-1	True	AATAAA	-20	NA	92675760	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621218_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92635996_92636139_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.13	chrX	-	5179	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	224	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.825550731912	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4541	False	NA	-1	True	AATAAA	-20	NA	92675497	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675461
ES.37305.14	chrX	-	5385	38	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	110.598412129299	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4291	False	NA	-1	True	AATAAA	-20	NA	92675747	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92674700_92674753_92675674
ES.37305.16	chrX	-	5224	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_30	84.0956501095446	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4307	False	NA	-1	True	AATAAA	-20	NA	92675731	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.17	chrX	-	5290	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	111.896126186547	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4312	False	NA	-1	True	AATAAA	-20	NA	92675726	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518087_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670204_92675674
ES.37305.18	chrX	-	5202	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	111.565520238658	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4298	False	NA	-1	True	AATAAA	-20	NA	92675740	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.19	chrX	-	5463	38	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.636674074555	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4281	False	NA	-1	True	AATAAA	-20	NA	92675757	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92354003_92354124_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.2	chrX	-	5371	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	85.9886360206473	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGTTTTGTTTTGT	4251	False	NA	4	True	AATAAA	-25	NA	92675787	92348366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.20	chrX	-	5094	35	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	133.135685398933	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4281	False	NA	-1	True	AATAAA	-20	NA	92675757	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.21	chrX	-	4265	29	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	93.0584904942114	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4276	False	NA	-1	True	AATAAA	-20	NA	92675762	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.23	chrX	-	5887	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	111.744957426293	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4281	False	NA	-2	True	AATAAA	-19	NA	92675757	92348372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.24	chrX	-	5153	35	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_24	110.199253321091	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4259	False	NA	-2	True	AATAAA	-19	NA	92675779	92348372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.25	chrX	-	5580	38	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	110.702550939507	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4256	False	NA	-4	True	AATAAA	-17	NA	92675782	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92670786_92671002_92675674
ES.37305.26	chrX	-	5174	29	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	28840	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_24	142.624395221312	630	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	92646881	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92561950_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806
ES.37305.28	chrX	-	4858	34	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	135.256542965801	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4301	False	NA	-4	True	AATAAA	-17	NA	92675737	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628221_92635139_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670210_92675674
ES.37305.29	chrX	-	5359	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	85.4320672656582	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4268	False	NA	-4	True	AATAAA	-17	NA	92675770	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640817_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.3	chrX	-	5132	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-7	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	110.787643899563	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTTTTGTTTTGTTT	4310	False	NA	1	True	AATAAA	-22	NA	92675728	92348369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92619384_92619485_92621102_92621223_92621741_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.30	chrX	-	5333	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.8107800287109	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4225	False	NA	-4	True	AATAAA	-17	NA	92675813	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534492_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.33	chrX	-	5174	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.987100582142	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4291	False	NA	-4	True	AATAAA	-17	NA	92675747	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92504974_92505107_92506899_92507079_92517918_92518094_92524123_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.34	chrX	-	4591	31	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-15	-2	combination_of_known_splicesites	FALSE	canonical	1	15	junction_13	87.9825487746797	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4262	False	NA	-4	True	AATAAA	-17	NA	92675776	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.37	chrX	-	5193	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	86.6355538083152	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4317	False	NA	-4	True	AATAAA	-17	NA	92675721	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640817_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.38	chrX	-	3453	20	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	50014	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	145.046081129307	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	92625707	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92508719_92508823_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623
ES.37305.39	chrX	-	6394	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_3	111.552135156727	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTACTGTGTTTTGTTT	4300	False	NA	-4	True	AATAAA	-17	NA	92675738	92348374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92495494_92495582_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.4	chrX	-	5401	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-52	-3	-52	3	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTTTTGTTTTGTTT	4225	False	NA	1	True	AATAAA	-22	NA	92675813	92348369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.43	chrX	-	5303	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	210	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	111.343188186595	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTACTGTGTTTTGTT	4527	False	NA	-5	True	AATAAA	-16	NA	92675511	92348375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628194_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675461
ES.37305.44	chrX	-	3963	26	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	37273	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	130.757155062352	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTTACTGTGTTTTGT	NA	False	NA	-6	True	AATAAA	-15	NA	92638448	92348376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92537767_92537833_92605056_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379
ES.37305.45	chrX	-	5236	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	110.627649051645	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTTACTGTGTTTTG	4294	False	NA	-7	True	AATAAA	-14	NA	92675744	92348377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640817_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.49	chrX	-	4290	29	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-3	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	93.2541171055887	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4286	False	NA	-8	True	AATAAA	-13	NA	92675752	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.5	chrX	-	5247	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	85.7740176205209	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTGTTTTGTTTTGTT	4291	False	NA	0	True	AATAAA	-21	NA	92675747	92348370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616752_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.51	chrX	-	5590	1	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	180584	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	92353968	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92348400_92354000
ES.37305.53	chrX	-	5248	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-25	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	86.8697171349259	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4252	False	NA	-8	True	AATAAA	-13	NA	92675786	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.57	chrX	-	5483	38	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	110.190896180986	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4269	False	NA	-8	True	AATAAA	-13	NA	92675769	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92559388_92559524_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.58	chrX	-	5187	36	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.358690240586	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4306	False	NA	-8	True	AATAAA	-13	NA	92675732	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.61	chrX	-	6635	29	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-50	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.673219933474	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4227	False	NA	-8	True	AATAAA	-13	NA	92675811	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92625863_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.64	chrX	-	5375	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-50	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	85.8551167971188	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4227	False	NA	-8	True	AATAAA	-13	NA	92675811	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621798_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.65	chrX	-	5187	35	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-25	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	88.0919865645327	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTTACTGTGTTTT	4252	False	NA	-8	True	AATAAA	-13	NA	92675786	92348378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92670093_92670219_92675674
ES.37305.66	chrX	-	5985	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-47	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	145.442354199393	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCAGTTACTGTGTTT	4230	False	NA	-9	True	AATAAA	-12	NA	92675808	92348379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517736_92517791_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.67	chrX	-	5353	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	112.097909695162	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCAGTTACTGTGTTT	4269	False	NA	-9	True	AATAAA	-12	NA	92675769	92348379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647283_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.69	chrX	-	5025	34	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	89.3919773795988	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTTACTGTGTT	4287	False	NA	-10	True	AATAAA	-11	NA	92675751	92348380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92675674
ES.37305.7	chrX	-	5525	38	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	107.393543870929	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTGTTTTGTTTTGTT	4310	False	NA	0	True	AATAAA	-21	NA	92675728	92348370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92561950_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.71	chrX	-	4589	11	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	136321	8	-4888	-8	3prime_fragment	FALSE	canonical	3	403	junction_9	34.4145318143368	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTTACTGTGTT	NA	False	NA	-10	True	AATAAA	-11	NA	92539440	92348380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154
ES.37305.74	chrX	-	3518	1	Intergenic	novelGene_30494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCTCAATTGCTACCA	NA	False	NA	NA	False	NA	NA	NA	92364720	92361202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92361200_92364700
ES.37305.75	chrX	-	5202	36	NNC	ENSMUSG00000006678.7	novel	610	4	NA	NA	-1	72477	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.556670123435	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGTTTTCTTTGTTT	4276	False	NA	NA	False	ATTAAA	-15	NA	92675762	92451618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92452618_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.76	chrX	-	4543	35	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	0	115459	0	60264	5prime_fragment	FALSE	canonical	3	370	junction_18	44.2369758754153	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAAATACAT	4277	False	NA	NA	False	NA	NA	NA	92675761	92463831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.77	chrX	-	4639	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	2	60222	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	112.265443462886	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAACAAA	4291	False	NA	NA	False	NA	NA	NA	92675747	92463873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92529768_92529921_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.78	chrX	-	10290	1	Intergenic	novelGene_30496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAATTACAGTACCTCTA	NA	False	NA	NA	False	NA	NA	NA	92484952	92474662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92474700_92485000
ES.37305.79	chrX	-	4989	32	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	4	7407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	117.100604220666	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTCGAATGTGTTT	4281	False	NA	NA	False	ATTAAA	-19	NA	92675757	92516688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647071_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675681
ES.37305.8	chrX	-	6013	37	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	84.892683706628	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACTGTGTTTTGTTTTGT	4281	False	NA	-1	True	AATAAA	-20	NA	92675757	92348371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.80	chrX	-	3540	31	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-33	175804	-33	-81	5prime_fragment	FALSE	canonical	3	370	junction_14	42.5379438462494	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACCTCATGTACATGTT	4244	False	NA	NA	False	NA	NA	NA	92675794	92524176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.81	chrX	-	7210	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	-1	-33858	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATAACTGTCCCTTGCTT	4276	False	NA	NA	False	AATAAA	-19	NA	92675762	92557953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.82	chrX	-	5279	18	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	28819	-34759	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	107.581368577704	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGGAAAGGTACTTA	NA	False	NA	NA	False	NA	NA	NA	92646902	92558854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806
ES.37305.83	chrX	-	4599	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	9	-36447	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCTCTTCCCTGTTTT	4298	False	NA	NA	False	NA	NA	NA	92675740	92560542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.84	chrX	-	3326	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	-9	-37627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.3090892056319	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCAAAGTGTATATTTTA	4308	False	NA	NA	False	AATAAA	-19	NA	92675730	92561722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92605056_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.85	chrX	-	3439	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	-1	-37629	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCCAAAGTGTATATTT	4276	False	NA	NA	False	AATAAA	-17	NA	92675762	92561724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.86	chrX	-	3332	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	0	-37735	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAAGTGTTATGAGTT	4277	False	NA	NA	False	ATTAAA	-21	NA	92675761	92561830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.87	chrX	-	4203	28	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	2	-37735	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	160.587194114538	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTAAGTGTTATGAGTT	4291	False	NA	NA	False	ATTAAA	-21	NA	92675747	92561830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635837_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92670786_92671002_92675674
ES.37305.88	chrX	-	3078	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	4	-37985	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGTGACTAAGTT	4281	False	NA	NA	False	AATAAA	-17	NA	92675757	92562080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.89	chrX	-	3603	26	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	-26	256026	-26	62283	5prime_fragment	FALSE	canonical	3	370	junction_9	44.4288194756512	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCCTAGGATGGT	4251	False	NA	NA	False	NA	NA	NA	92675787	92604398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.90	chrX	-	3717	27	NNC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	-1	62283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	125.379406451499	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCCTAGGATGGT	4276	False	NA	NA	False	NA	NA	NA	92675762	92604398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92669418_92669558_92670093_92670219_92675674
ES.37305.91	chrX	-	4671	20	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	30	273508	-10	44801	5prime_fragment	FALSE	canonical	3	370	junction_3	40.0611029149099	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTCATTATAATCATT	4307	False	NA	NA	False	NA	NA	NA	92675731	92621880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ES.37305.92	chrX	-	5158	1	Intergenic	novelGene_30497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAGAAAAAAAACCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	92646704	92641546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92641500_92646700
ES.37305.93	chrX	-	361	1	ISM	ENSMUSG00000006678.7	ENSMUST00000127718.2	3612	2	8669	38	8641	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	92667080	92666719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92666700_92667100
ES.37305.94	chrX	-	179	1	ISM	ENSMUSG00000006678.7	ENSMUST00000127718.2	3612	2	8667	222	8639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	92667082	92666903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92666900_92667100
ES.37306.1	chrX	+	180	1	Intergenic	novelGene_30499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAGAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	92679326	92679506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92679300_92679500
ES.37307.1	chrX	+	4882	8	FSM	ENSMUSG00000035246.17	ENSMUST00000113933.9	4867	8	-16	1	-16	-1	multi-exon	FALSE	canonical	0	0	junction_1	22.9462548631557	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGCCTTGTTTAT	NA	False	NA	3	True	AATAAA	-16	NA	92698452	92793556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_92698823_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37307.10	chrX	+	4298	5	ISM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	42681	0	-13779	0	3prime_fragment	FALSE	canonical	3	56	junction_3	4.84767985741633	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGCCTTGTTTATT	NA	False	NA	4	True	AATAAA	-17	NA	92761388	92793557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37307.2	chrX	+	4896	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	2	-10	2	10	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTATTGTGTGTTGCT	NA	False	NA	14	True	AATAAA	-27	NA	92718709	92793567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37307.3	chrX	+	4354	9	NNC	ENSMUSG00000035246.17	novel	4888	8	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	21.2176223927187	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGCCTTGTTTAT	NA	False	NA	3	True	AATAAA	-16	NA	92718718	92793556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824_92792770_92793291
ES.37307.4	chrX	+	2998	9	NNC	ENSMUSG00000035246.17	novel	4888	8	NA	NA	53	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	21.5431978823943	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTGGTTGCCTTGTTT	NA	False	NA	1	True	AATAAA	-14	NA	92718760	92793554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824_92790040_92791873
ES.37307.5	chrX	+	3539	2	NNC	ENSMUSG00000035246.17	novel	4888	8	NA	NA	54	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTTGCCTTGTTTAT	NA	False	NA	3	True	AATAAA	-16	NA	92718761	92793556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_92718944_92790199
ES.37307.6	chrX	+	2218	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	130	2540	130	-2540	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCCTCTCCTGCTCTCC	NA	False	NA	NA	False	NA	NA	NA	92718837	92791017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37307.7	chrX	+	4686	8	NNC	ENSMUSG00000035246.17	novel	4888	8	NA	NA	164	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.6075660082267	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACTTTGGTTGCCTTGT	NA	False	NA	-1	True	AATAAA	-12	NA	92718871	92793552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_92719083_92745690_92745791_92750163_92750281_92761423_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37307.9	chrX	+	1936	6	ISM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	31510	2423	-24950	-2423	3prime_fragment	FALSE	canonical	3	56	junction_4	4.4988887516808	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAATGTTTTGTCCCAG	NA	False	NA	NA	False	NA	NA	NA	92750217	92791134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ES.37308.1	chrX	-	129	1	Intergenic	novelGene_30500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	92699936	92699807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92699800_92699900
ES.37309.1	chrX	-	176	1	Intergenic	novelGene_30501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATCAGTGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	92701471	92701295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92701300_92701500
ES.3731.11	chr10	+	5418	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	18	1768	18	1727	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTGACACAGTTGTTA	NA	False	NA	NA	False	CATAAA	-16	NA	111000630	111131342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.14	chr10	+	3770	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	52	3382	2	113	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACATAGTTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	111000664	111129728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.15	chr10	+	6173	24	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	2	-970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.2205387939878	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATTTTCCGATTTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	111000664	111132140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111060532_111060570_111069422_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.16	chr10	+	4158	22	NNC	ENSMUSG00000020189.16	novel	3622	23	NA	NA	2	-2454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	24.3427900736836	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCACTACTCTATTCG	NA	False	NA	NA	False	AATAAA	-19	NA	111000664	111127161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111125857
ES.3731.17	chr10	+	7106	23	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.5879031653014	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCCAGTGACTCTT	NA	False	NA	7	True	AATAAA	-18	NA	111000664	111133110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111069422_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.18	chr10	+	7034	23	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.5066370089614	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	5	True	AATAAA	-16	NA	111000672	111133108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111060532_111060570_111069422_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.19	chr10	+	4243	22	ISM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	89	5966	39	-2471	5prime_fragment	FALSE	canonical	3	53	junction_5	12.2454119317679	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATTACACAAATTAATTT	NA	False	NA	NA	False	AATAAA	-2	NA	111000701	111127144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649
ES.3731.2	chr10	+	3303	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	-16	3917	-16	-422	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTAGAAATGTCTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	111000596	111129193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.21	chr10	+	4752	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	99	2353	49	1142	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGAAAAGTCTTTTCATT	NA	False	NA	NA	False	TTTAAA	-40	NA	111000711	111130757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.22	chr10	+	5012	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	102	2090	52	1405	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCTGATGCTTTTCG	NA	False	NA	NA	False	ACTAAA	-19	NA	111000714	111131020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.23	chr10	+	3073	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	105	4026	55	-531	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCTCAACATTGAATC	NA	False	NA	NA	False	AATAAA	-16	NA	111000717	111129084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.24	chr10	+	4829	22	NIC	ENSMUSG00000020189.16	novel	3622	23	NA	NA	60	1405	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.0347770202075	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCTGATGCTTTTCG	NA	False	NA	NA	False	ACTAAA	-19	NA	111000722	111131020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111001058_111040595_111040702_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.25	chr10	+	3795	25	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	96	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.7968470717353	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGATCTATATGTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	111000758	111129792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111084454_111084510_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.27	chr10	+	6231	17	ISM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	102847	2	19531	-2	3prime_fragment	FALSE	canonical	3	57	junction_8	11.9373363863133	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTGATCCAGTGACTC	NA	False	NA	5	True	AATAAA	-16	NA	111103459	111133108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.28	chr10	+	5491	16	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	22434	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	22.4792249767548	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCCAGTGACTCTT	NA	False	NA	7	True	AATAAA	-18	NA	111106362	111133110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952_111132255_111132690
ES.3731.29	chr10	+	177	1	Intergenic	novelGene_2844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGAATGCTTGA	NA	False	NA	NA	False	NA	NA	NA	111114851	111115028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_111114900_111115000
ES.3731.3	chr10	+	3145	23	NNC	ENSMUSG00000020189.16	novel	3622	23	NA	NA	-14	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.5879031653014	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTCTCAACATTGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	111000598	111129083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111069422_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.30	chr10	+	5312	5	ISM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	122393	11	39077	-11	3prime_fragment	FALSE	canonical	3	71	junction_3	7.26291952316697	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGCAATCTGTGATC	NA	False	NA	-4	True	AATAAA	-7	NA	111123005	111133099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.31	chr10	+	5905	3	NIC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	40183	0	intron_retention	FALSE	canonical	3	71	junction_1	3	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCCAGTGACTCTT	NA	False	NA	7	True	AATAAA	-18	NA	111124111	111133110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111125756_111127351_111127455_111128952
ES.3731.4	chr10	+	7224	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	-4	-16	-4	16	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGATATAATGTATTAAT	NA	False	NA	23	True	AATAAA	-34	NA	111000608	111133126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.5	chr10	+	7198	24	NNC	ENSMUSG00000020189.16	novel	7204	24	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.2205387939878	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATCCAGTGACTCT	NA	False	NA	6	True	AATAAA	-17	NA	111000608	111133109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111001058_111040595_111040702_111060532_111060570_111069422_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.6	chr10	+	7161	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	-45	-3494	5	-1	multi-exon	FALSE	canonical	2	6	junction_2	18.6097370763154	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATCCAGTGACTCT	NA	False	NA	6	True	AATAAA	-17	NA	111000617	111133109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.8	chr10	+	6223	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	10	971	10	-971	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAATTTTCCGATTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	111000622	111132139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.3731.9	chr10	+	6606	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	11	587	11	-587	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGATGTTCTTTTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	111000623	111132523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ES.37310.1	chrX	-	175	1	Intergenic	novelGene_30502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGATACATCTATA	NA	False	NA	NA	False	NA	NA	NA	92725387	92725212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92725200_92725400
ES.37311.1	chrX	+	179	1	Intergenic	novelGene_30503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	92821956	92822135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92822000_92822100
ES.37312.1	chrX	-	11410	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-6	-9289	-6	9289	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCATTAGTGTGCTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	92875813	92798923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.11	chrX	-	2090	12	NNC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	-5	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	153.95416297561	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGGAATTTCTCACT	NA	False	NA	-22	True	ATTAAA	-13	NA	92875812	92808232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852539_92857532_92857675_92875452
ES.37312.14	chrX	-	1749	13	NNC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	83	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	199.821222179561	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGCTGTGGCATCA	NA	False	NA	-4	True	ACTAAA	-19	NA	92875724	92808620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92866997_92867123_92875452
ES.37312.15	chrX	-	4771	15	NNC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	63	80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	241.529311188653	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTTGCTGTGGCATC	NA	False	NA	-5	True	ACTAAA	-18	NA	92875744	92808621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92866997_92869642_92870374_92870723_92871608_92871745_92875452
ES.37312.16	chrX	-	1834	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-129	410	-129	79	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCTTGCTGTGGCAT	NA	False	NA	-6	True	ACTAAA	-17	NA	92875936	92808622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.18	chrX	-	1586	14	NNC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	267	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	225.545308952619	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTTGCTGTGGCA	NA	False	NA	-7	True	ACTAAA	-16	NA	92875540	92808623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92870159_92870255_92870427_92870482_92875452
ES.37312.19	chrX	-	1587	11	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	3	78	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	155.054474298551	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTTGCTGTGGCA	NA	False	NA	-7	True	ACTAAA	-16	NA	92875804	92808623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92808862_92812494_92812635_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.2	chrX	-	3994	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	31	-1910	31	1910	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAGGAAGCCTCTTTC	NA	False	NA	NA	False	AATAGA	-13	NA	92875776	92806302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.20	chrX	-	1472	10	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	18	78	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	169.436320388123	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTTGCTGTGGCA	NA	False	NA	-7	True	ACTAAA	-16	NA	92875789	92808623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92875452
ES.37312.21	chrX	-	178	1	Intergenic	novelGene_30504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	92836079	92835901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_92835900_92836100
ES.37312.22	chrX	-	1780	2	ISM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	88	47949	88	-30406	5prime_fragment	FALSE	canonical	3	512	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	92875719	92856161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_92857675_92875452
ES.37312.3	chrX	-	2520	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	28	-433	28	433	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGGCTCTCAATTTG	NA	False	NA	NA	False	NA	NA	NA	92875779	92807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.4	chrX	-	2311	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	28	-224	28	224	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGTCATTACTT	NA	False	NA	NA	False	NA	NA	NA	92875779	92807988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.5	chrX	-	1891	10	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	12	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	169.436320388123	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGGTTTGAAAGATT	NA	False	NA	0	True	ATTAAA	-35	NA	92875795	92808210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92875452
ES.37312.6	chrX	-	2122	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	-5	-2	-5	2	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTGGTTTGAAAGATT	NA	False	NA	0	True	ATTAAA	-35	NA	92875812	92808210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.7	chrX	-	2051	12	NNC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	26	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.451789798308	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTCACTTAACACCTT	NA	False	NA	-13	True	ATTAAA	-22	NA	92875781	92808223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92808862_92812521_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37312.8	chrX	-	1812	11	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	172	-17	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	155.054474298551	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGAATTTCTCACTTAA	NA	False	NA	-19	True	ATTAAA	-16	NA	92875635	92808229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_92808862_92812494_92812635_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ES.37313.1	chrX	-	5525	2	NNC	ENSMUSG00000082728.2	novel	1560	2	NA	NA	-1028	3762	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTAGTGGCCTCTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	92966596	92960138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92965589_92966521
ES.37313.2	chrX	-	5521	2	NNC	ENSMUSG00000082728.2	novel	1560	2	NA	NA	-815	3758	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTGTTTAGTGGCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	92966383	92960142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_92965589_92966308
ES.37314.1	chrX	+	153	1	Intergenic	novelGene_30505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92990776	92990929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_92990800_92990900
ES.37315.1	chrX	+	3022	3	FSM	ENSMUSG00000081044.9	ENSMUST00000121565.8	2997	3	-26	1	-26	-1	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTGATTCCAATTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	93012238	93019075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93013537_93015408_93015640_93017582
ES.37316.1	chrX	+	5461	2	Antisense	novelGene_ENSMUSG00000083114.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTAGTGGCCTCTGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	93024151	93029940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_93024327_93024654
ES.37317.1	chrX	+	172	1	Intergenic	novelGene_30506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTTATGGCAG	NA	False	NA	NA	False	NA	NA	NA	93050213	93050385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93050200_93050400
ES.37318.1	chrX	-	293	1	Intergenic	novelGene_30507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	93068016	93067723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93067700_93068000
ES.37319.1	chrX	-	174	1	Intergenic	novelGene_30508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	93078284	93078110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93078100_93078300
ES.3732.1	chr10	-	1153	1	Intergenic	novelGene_2840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAACGAAGACACCGCCT	7528	False	NA	NA	False	NA	NA	NA	111002759	111001606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111001600_111002800
ES.37320.1	chrX	+	173	1	Intergenic	novelGene_30509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	93088640	93088813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93088600_93088800
ES.37321.1	chrX	+	170	1	Intergenic	novelGene_30510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	93133185	93133355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93133200_93133400
ES.37322.1	chrX	+	4548	1	Antisense	novelGene_ENSMUSG00000079509.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-35	NA	93162832	93167380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_93162800_93167400
ES.37323.1	chrX	+	181	1	Intergenic	novelGene_30516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93173098	93173279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93173100_93173300
ES.37323.10	chrX	+	176	1	Intergenic	novelGene_30532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATGGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	93257251	93257427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93257300_93257400
ES.37323.11	chrX	+	6381	5	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	2027	4	NA	NA	1	0	multi-exon	FALSE	canonical	3	7	junction_1	20.1168461742889	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCTTTAACTGATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	93278210	93321330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93315961
ES.37323.12	chrX	+	5447	4	FSM	ENSMUSG00000043929.17	ENSMUST00000153900.8	627	4	10	-4830	10	1602	multi-exon	FALSE	canonical	3	7	junction_1	20.8859335970941	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTCATTTGGATTATAT	NA	False	NA	NA	False	NA	NA	NA	93278219	93301176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020
ES.37323.13	chrX	+	1112	5	NIC	ENSMUSG00000043929.17	novel	627	4	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	18.9868375460475	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTCAGCAGCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93278230	93297665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93278260_93278826_93279027_93285550_93285602_93296020_93296733_93297545
ES.37323.14	chrX	+	1287	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	-68	8	-5	-4	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTCAGCAGCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93278527	93297665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
ES.37323.15	chrX	+	6627	4	FSM	ENSMUSG00000043929.17_ENSMUSG00000099072.3	ENSMUST00000170594.8	2027	4	-384	-4216	0	1	multi-exon	FALSE	canonical	3	16	junction_3	16.6799946709291	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTTTAACTGATTATT	NA	False	NA	NA	False	AATAAA	-21	NA	93278532	93321331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93279027_93285550_93285602_93296020_93296733_93315961
ES.37323.16	chrX	+	5861	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-60	-1857	0	1857	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGGGGCGGAGCTT	NA	False	NA	NA	False	AATAAA	-10	NA	93278532	93301431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
ES.37323.17	chrX	+	4674	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-50	-680	7	680	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCACCACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	93278542	93300254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
ES.37323.18	chrX	+	1212	4	FSM	ENSMUSG00000043929.17	ENSMUST00000113908.8	1235	4	19	4	16	-4	multi-exon	FALSE	canonical	2	6	junction_2	24.3447461820136	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTCAGCAGCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93278551	93297665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278732_93278826_93279027_93296020_93296733_93297545
ES.37323.19	chrX	+	6513	5	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	1227	5	NA	NA	16	1	multi-exon	FALSE	canonical	3	16	junction_4	17.9652442232217	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTTTAACTGATTATT	NA	False	NA	NA	False	AATAAA	-21	NA	93278551	93321331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93315961
ES.37323.2	chrX	+	158	2	Intergenic	novelGene_30517	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAAATAAATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	93173101	93181098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93173249_93181087
ES.37323.20	chrX	+	2079	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-39	1904	18	1	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCAGCAGCCTGGCATG	NA	False	NA	NA	False	AATAAA	-21	NA	93278553	93297670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
ES.37323.21	chrX	+	1355	4	NIC	ENSMUSG00000043929.17	novel	1227	5	NA	NA	19	-4	intron_retention	FALSE	canonical	3	23	junction_3	13.4246870437348	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTCAGCAGCCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93278554	93297665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93279027_93285550_93285602_93296020_93296733_93297545
ES.37323.22	chrX	+	6581	6	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	1227	5	NA	NA	-3	-2	multi-exon	FALSE	canonical	1	1	junction_2	26.7237721888209	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTCTTTAACTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	93278589	93321328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_93278732_93278826_93279027_93281654_93281764_93285550_93285602_93296020_93296733_93315961
ES.37323.23	chrX	+	6415	4	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	1235	4	NA	NA	2	0	multi-exon	FALSE	canonical	2	6	junction_2	25.31578339473	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCTTTAACTGATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	93278597	93321330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_93278732_93278826_93279027_93296020_93296733_93315961
ES.37323.24	chrX	+	6673	5	Fusion	ENSMUSG00000043929.17_ENSMUSG00000099072.3	novel	2027	4	NA	NA	2	3	intron_retention	FALSE	canonical	1	1	junction_1	21.6679486800205	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACTGATTATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	93278597	93321333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_93279027_93281654_93281764_93285550_93285602_93296020_93296733_93315961
ES.37323.25	chrX	+	177	1	Intergenic	novelGene_30534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAACAAAACAAAACAAAA	3480	False	NA	NA	False	NA	NA	NA	93289990	93290167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93290000_93290200
ES.37323.26	chrX	+	1339	1	Intergenic	novelGene_30535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACTGTGAAAGCCAGGG	3865	False	NA	NA	False	NA	NA	NA	93290375	93291714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93290400_93291700
ES.37323.27	chrX	+	3757	1	NIC	ENSMUSG00000043929.17	novel	1235	4	NA	NA	14492	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTCAGCAGCCTG	7398	False	NA	NA	False	AATAAA	-16	NA	93293908	93297665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93293900_93297700
ES.37323.28	chrX	+	175	1	Intergenic	novelGene_30536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAAGAAGTGT	8248	False	NA	NA	False	NA	NA	NA	93294758	93294933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93294800_93294900
ES.37323.29	chrX	+	2368	1	FSM	ENSMUSG00000099072.3	ENSMUST00000184567.3	64	1	-1357	-947	-1357	947	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTTGATATCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	93316822	93319190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93316800_93319200
ES.37323.3	chrX	+	156	2	Intergenic	novelGene_30518	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	93173104	93339539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93173228_93339506
ES.37323.30	chrX	+	221	1	Intergenic	novelGene_30539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTAACAGTGCCATAAA	NA	False	NA	NA	False	NA	NA	NA	93339382	93339603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93339400_93339600
ES.37323.4	chrX	+	169	1	Intergenic	novelGene_30519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGAGATCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	93176859	93177028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93176900_93177000
ES.37323.5	chrX	+	177	1	Intergenic	novelGene_30521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGAAAAGAAAAATA	NA	False	NA	NA	False	NA	NA	NA	93188406	93188583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93188400_93188600
ES.37323.6	chrX	+	180	1	Intergenic	novelGene_30523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAATTTAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	93209022	93209202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93209000_93209200
ES.37323.7	chrX	+	145	1	Intergenic	novelGene_30526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93222834	93222979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93222800_93223000
ES.37323.8	chrX	+	167	1	Intergenic	novelGene_30528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93226056	93226223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93226100_93226200
ES.37323.9	chrX	+	177	1	Intergenic	novelGene_30529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	93227732	93227909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93227700_93227900
ES.37324.1	chrX	-	6904	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	441	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	38.1308167192032	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGAGTGTTGGCTATAG	NA	False	NA	2	True	AATAAA	-25	NA	93166065	93118233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165758
ES.37324.10	chrX	-	6820	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-27072	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93194380	93118237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
ES.37324.11	chrX	-	8072	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	235	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	38.742741255621	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93166271	93118237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93164860
ES.37324.12	chrX	-	7092	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	316	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTAGTGGAGTGTTGGC	NA	False	NA	-3	True	AATAAA	-20	NA	93166190	93118238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165758
ES.37324.13	chrX	-	6879	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	760	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTAGTGGAGTGTTGGC	NA	False	NA	-3	True	AATAAA	-20	NA	93165746	93118238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165527
ES.37324.14	chrX	-	6634	8	NNC	ENSMUSG00000079509.11	novel	6933	8	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1112855395472	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	93166741	93118240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141912_93142459_93145896_93145987_93166673
ES.37324.15	chrX	-	6613	7	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	575	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	51.236922450731	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	93165931	93118240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93165758
ES.37324.16	chrX	-	6555	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.0025474838079	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCCTAGTGGAGTGTTG	NA	False	NA	-5	True	AATAAA	-18	NA	93166734	93118240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142339_93142434_93142459_93145896_93145987_93166673
ES.37324.17	chrX	-	6688	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-15417	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.1562478208823	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACCCTAGTGGAGTGT	NA	False	NA	-7	True	AATAAA	-16	NA	93182725	93118242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93182625
ES.37324.18	chrX	-	8304	6	NIC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	18653	-6	intron_retention	FALSE	canonical	3	7	junction_4	44.1787279128768	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93147853	93118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896
ES.37324.19	chrX	-	6733	7	NIC	ENSMUSG00000079509.11	novel	6933	8	NA	NA	12	-6	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	48.606126728588	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93166969	93118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93166673
ES.37324.2	chrX	-	6557	7	NIC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	53.3710803921208	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166450	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93166337
ES.37324.20	chrX	-	6835	10	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	47.543612207408	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93166753	93118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93146459_93146560_93157801_93157870_93166673
ES.37324.21	chrX	-	6711	8	NIC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	40.8191631667364	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93167334	93118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93167210
ES.37324.22	chrX	-	6523	7	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26931	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	51.9339858752329	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTACCCTAGTGGAGTG	NA	False	NA	-8	True	AATAAA	-15	NA	93194239	93118243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93194153
ES.37324.23	chrX	-	6515	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	287	200	-11	-199	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGACATTTTGCTGCA	NA	False	NA	NA	False	AATAAA	-13	NA	93166726	93118436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.24	chrX	-	5635	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	263	1104	-12	-1103	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGATTTGTTTTATTAT	NA	False	NA	NA	False	TATAAA	-31	NA	93166750	93119340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.25	chrX	-	5525	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26933	-1156	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTCTGATTCCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	93194241	93119393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
ES.37324.26	chrX	-	5553	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	12	1368	12	-1368	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCCTATTTCTTAATTC	NA	False	NA	NA	False	AATAAA	-25	NA	93167001	93119605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ES.37324.27	chrX	-	5480	10	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	920	-1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	53.2269772870028	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCCCCTATTTCTTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	93165586	93119607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93146459_93146560_93157771_93157870_93165527
ES.37324.28	chrX	-	5615	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	16	1371	16	-1370	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCCCCTATTTCTTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	93166997	93119607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.29	chrX	-	5684	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	582	-1374	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCATCCCCCTATTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	93165924	93119611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165527
ES.37324.3	chrX	-	6575	8	NIC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	40.1629334646985	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166736	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.30	chrX	-	5197	8	NIC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	4	-1375	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	40.1629334646985	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCATCCCCCTATTTC	NA	False	NA	NA	False	AATAAA	-18	NA	93166734	93119612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.31	chrX	-	5306	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26934	-1376	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCATCCCCCTATTT	NA	False	NA	99	True	AATAAA	-17	NA	93194242	93119613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
ES.37324.32	chrX	-	5796	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	237	-1376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCATCCCCCTATTT	NA	False	NA	99	True	AATAAA	-17	NA	93166269	93119613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165758
ES.37324.33	chrX	-	5375	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	5	-1376	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.4123698307643	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCATCCCCCTATTT	NA	False	NA	99	True	AATAAA	-17	NA	93166733	93119613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157771_93157870_93166673
ES.37324.34	chrX	-	4403	8	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	577	-1377	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.964173090275	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTCATCCCCCTATT	NA	False	NA	98	True	AATAAA	-16	NA	93165929	93119614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93122675_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165758
ES.37324.35	chrX	-	5385	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	577	-1379	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	38.1308167192032	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATTTTCATCCCCCTA	NA	False	NA	96	True	AATAAA	-14	NA	93165929	93119616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165758
ES.37324.36	chrX	-	5512	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	-56	1477	-56	-1477	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGTTCAGTCTATTTGA	NA	False	NA	-2	True	AATAAA	-23	NA	93167069	93119714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ES.37324.37	chrX	-	5536	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	-12	1478	-12	-1477	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGTTCAGTCTATTTGA	NA	False	NA	-2	True	AATAAA	-23	NA	93167025	93119714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.38	chrX	-	5570	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	362	-1477	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	37.8200922130023	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGTTCAGTCTATTTGA	NA	False	NA	-2	True	AATAAA	-23	NA	93166144	93119714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93165758
ES.37324.39	chrX	-	5306	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	-98	-1478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.4123698307643	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAATGTTCAGTCTATTTG	NA	False	NA	-3	True	AATAAA	-22	NA	93166836	93119715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157841_93157870_93166673
ES.37324.4	chrX	-	6884	10	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.6828014435433	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166076	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142339_93142434_93142459_93145896_93145987_93157801_93157870_93165758
ES.37324.40	chrX	-	5486	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	607	-1479	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	39.8092390055887	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93165899	93119716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165527
ES.37324.41	chrX	-	5105	8	NIC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	-8	-1479	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	40.1629334646985	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93166746	93119716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.42	chrX	-	5305	7	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	577	-1479	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.3710803921208	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93165929	93119716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93165588
ES.37324.43	chrX	-	5152	8	NNC	ENSMUSG00000079509.11	novel	6933	8	NA	NA	3	-1479	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	49.1112855395472	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93166735	93119716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141912_93142459_93145896_93145987_93166673
ES.37324.44	chrX	-	5025	7	NIC	ENSMUSG00000079509.11	novel	6933	8	NA	NA	4	-1479	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	48.606126728588	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATGTTCAGTCTATTT	NA	False	NA	-4	True	AATAAA	-21	NA	93166734	93119716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93141888_93142459_93145896_93145987_93166673
ES.37324.45	chrX	-	5199	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	-26931	-1480	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	39.1371215818727	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGAATGTTCAGTCTATT	NA	False	NA	-5	True	AATAAA	-20	NA	93194239	93119717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93194153
ES.37324.46	chrX	-	5341	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	442	-1558	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	38.1308167192032	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGGGATGTGTGACATT	NA	False	NA	-83	True	AGTAAA	-20	NA	93166064	93119795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165758
ES.37324.47	chrX	-	5007	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	-4	-1559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.0025474838079	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGGGGATGTGTGACAT	NA	False	NA	-84	True	AGTAAA	-19	NA	93166742	93119796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142339_93142434_93142459_93145896_93145987_93166673
ES.37324.48	chrX	-	5103	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	10	-1589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.4651585671633	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGTAAAATACATAA	NA	False	NA	NA	False	ATTAAA	-32	NA	93166728	93119826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141912_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.49	chrX	-	199	1	Intergenic	novelGene_30511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAAAAGATTTTATA	NA	False	NA	NA	False	NA	NA	NA	93134390	93134191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93134200_93134400
ES.37324.5	chrX	-	6755	9	NNC	ENSMUSG00000079509.11	novel	7002	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.4123698307643	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93166736	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157771_93157870_93166673
ES.37324.50	chrX	-	173	1	Intergenic	novelGene_30512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCAACC	NA	False	NA	NA	False	NA	NA	NA	93137921	93137748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93137700_93137900
ES.37324.51	chrX	-	162	2	Intergenic	novelGene_30513	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAATTCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	93139119	93137762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93137772_93138966
ES.37324.52	chrX	-	4277	4	FSM	ENSMUSG00000079509.11	ENSMUST00000113925.8	879	4	-264	-3134	2	3134	multi-exon	FALSE	canonical	3	51	junction_3	30.6920185064456	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACTAGCAGATGAATGG	NA	False	NA	NA	False	NA	NA	NA	93166979	93138645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.53	chrX	-	180	1	Intergenic	novelGene_30514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATATAAAT	NA	False	NA	NA	False	NA	NA	NA	93139117	93138937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93138900_93139100
ES.37324.54	chrX	-	591	3	Intergenic	novelGene_30515	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACATTTGTTTGTTTGT	NA	False	NA	NA	False	TATAAA	-25	NA	93194242	93168848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93169159_93182625_93182818_93194153
ES.37324.55	chrX	-	1683	1	Intergenic	novelGene_30520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGAAAGGAGCCTG	NA	False	NA	NA	False	NA	NA	NA	93186923	93185240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93185200_93186900
ES.37324.6	chrX	-	6989	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	13	0	13	0	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93167000	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ES.37324.7	chrX	-	7009	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	-75	-1	-75	0	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93167088	93118236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ES.37324.8	chrX	-	7122	8	NNC	ENSMUSG00000079509.11	novel	6762	8	NA	NA	450	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	39.8092390055887	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93166056	93118237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93165527
ES.37324.9	chrX	-	9247	7	ISM	ENSMUSG00000079509.11	ENSMUST00000113926.8	6762	8	17866	0	17866	0	3prime_fragment	FALSE	canonical	3	94	junction_5	11.8836956466506	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93148640	93118237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896
ES.37325.1	chrX	-	221	2	Antisense	novelGene_ENSMUSG00000043929.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTACTTGTTTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	93305774	93207079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_93207220_93305693
ES.37325.10	chrX	-	3651	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	-2	-2	-2	2	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGCCCATGTGTTTTA	NA	False	NA	0	True	AATAAA	-23	NA	93256317	93232310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.11	chrX	-	3714	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-120	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256588	93232312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
ES.37325.12	chrX	-	3709	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_11	320.693669647634	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256492	93232312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256285
ES.37325.14	chrX	-	3590	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	324.35561037767	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256257	93232312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243456_93244485_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.15	chrX	-	3669	11	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	5	0	intron_retention	FALSE	canonical	3	1008	junction_2	63.9062594743269	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256252	93232312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253270_93255324_93255389_93256170
ES.37325.16	chrX	-	3556	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	324.35561037767	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256283	93232312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256229
ES.37325.17	chrX	-	3428	11	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	339.693744422826	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTGCCCATGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	93256270	93232313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.18	chrX	-	3459	11	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	340.245808203422	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTGCCCATGTGTT	NA	False	NA	-3	True	AATAAA	-20	NA	93256263	93232313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.2	chrX	-	223	1	Intergenic	novelGene_30522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTACTTGTTTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	93207302	93207079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93207100_93207300
ES.37325.20	chrX	-	3508	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	326.533432659855	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTGTGCCCATGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	93256257	93232314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240036_93240957_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.21	chrX	-	3426	10	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	2988	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.565646898375	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAATTGTGCCCATGTG	NA	False	NA	-5	True	AATAAA	-18	NA	93253269	93232315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243456_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141
ES.37325.22	chrX	-	3341	10	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	353.269316353039	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAATTGTGCCCATGTG	NA	False	NA	-5	True	AATAAA	-18	NA	93256252	93232315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.24	chrX	-	3577	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	316.774367649909	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAATTGTGCCCATGTG	NA	False	NA	-5	True	AATAAA	-18	NA	93256257	93232315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252943_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.25	chrX	-	3189	10	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	5	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	355.625270943072	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTAATTGTGCCCATG	NA	False	NA	-7	True	AATAAA	-16	NA	93256252	93232317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243402_93247652_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.27	chrX	-	3838	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	155	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	324.35561037767	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTAATTGTGCC	NA	False	NA	-11	True	AATAAA	-12	NA	93256102	93232321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93255757
ES.37325.28	chrX	-	3569	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	326.53424256921	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTAATTGTGCC	NA	False	NA	-11	True	AATAAA	-12	NA	93256252	93232321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246549_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.3	chrX	-	175	2	Antisense	novelGene_ENSMUSG00000043929.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	93305616	93207120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_93207266_93305586
ES.37325.31	chrX	-	3562	12	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	324.464135470489	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTAATTGTGCC	NA	False	NA	-11	True	AATAAA	-12	NA	93256246	93232321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244584_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.32	chrX	-	3435	13	NNC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	12	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.641656782259	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTAATTGTGCC	NA	False	NA	-11	True	AATAAA	-12	NA	93256245	93232321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93233712_93233844_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.34	chrX	-	3455	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	16	176	16	-176	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGAAAGCTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	93256299	93232488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.35	chrX	-	3401	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-35	-228	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTCCAACTCTGGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	93256503	93232540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
ES.37325.36	chrX	-	3147	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	63	437	5	-437	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCACTGCCCCTAGCT	NA	False	NA	NA	False	AATAAA	-12	NA	93256252	93232749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.37	chrX	-	2791	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	72	784	14	-784	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTTATTTGTCCTTCT	NA	False	NA	NA	False	AGTAAA	-13	NA	93256243	93233096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.38	chrX	-	2064	7	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	8630	1000	8572	-1000	3prime_fragment	FALSE	canonical	3	1008	junction_2	54.9810573440223	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTGGATCAAGTCTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	93247685	93233312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555
ES.37325.39	chrX	-	1629	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	18	2000	18	-2000	multi-exon	FALSE	canonical	3	1008	junction_2	64.9970120101527	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACCTCTACTTTT	NA	False	NA	NA	False	TATAAA	-24	NA	93256297	93234312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37325.4	chrX	-	177	2	Antisense	novelGene_ENSMUSG00000043929.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	93305772	93207120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_93207179_93305653
ES.37325.40	chrX	-	1629	12	NIC	ENSMUSG00000035150.16	novel	3647	12	NA	NA	-35	-2000	combination_of_known_junctions	FALSE	canonical	3	89	junction_11	299.322651309213	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGACCTCTACTTTT	NA	False	NA	NA	False	TATAAA	-24	NA	93256503	93234312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256376
ES.37325.41	chrX	-	187	1	Intergenic	novelGene_30531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	884	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATCTAT	NA	False	NA	NA	False	NA	NA	NA	93249012	93248825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93248800_93249000
ES.37325.42	chrX	-	167	1	Intergenic	novelGene_30533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATACAACCTAGCTT	NA	False	NA	NA	False	NA	NA	NA	93272936	93272769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93272800_93272900
ES.37325.43	chrX	-	331	1	Intergenic	novelGene_30537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93305773	93305442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93305400_93305800
ES.37325.5	chrX	-	155	1	Intergenic	novelGene_30524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAGGGCTAT	NA	False	NA	NA	False	NA	NA	NA	93215275	93215120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93215100_93215300
ES.37325.6	chrX	-	199	1	Intergenic	novelGene_30525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGGGCCTGGGTTTAA	NA	False	NA	NA	False	NA	NA	NA	93216996	93216797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93216800_93217000
ES.37325.7	chrX	-	159	1	Intergenic	novelGene_30527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	93224721	93224562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93224600_93224700
ES.37325.8	chrX	-	183	1	Intergenic	novelGene_30530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	93231538	93231355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93231400_93231500
ES.37325.9	chrX	-	4316	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	62	-731	4	731	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	93256253	93231581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ES.37326.1	chrX	-	160	2	Antisense	novelGene_ENSMUSG00000099072.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	93330069	93313457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_93313521_93329972
ES.37326.2	chrX	-	178	1	Intergenic	novelGene_30538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	93330070	93329892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93329900_93330100
ES.37327.1	chrX	+	1040	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	-127	-129	-127	-3	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGGCCTGCTTTCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	93410595	93460696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ES.37327.10	chrX	+	5058	1	NIC	ENSMUSG00000079508.9	novel	1218	9	NA	NA	44853	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93455641	93460699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93455600_93460700
ES.37327.11	chrX	+	4405	3	Antisense	novelGene_ENSMUSG00000084007.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGACTGCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	93460931	93467265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_93461628_93462543_93462687_93463699
ES.37327.12	chrX	+	3624	1	Antisense	novelGene_ENSMUSG00000084007.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGACTGCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	93463641	93467265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_93463600_93467300
ES.37327.2	chrX	+	3331	12	NNC	ENSMUSG00000079508.9	novel	784	9	NA	NA	3	7146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	196.896960929163	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATCTCGTACTAGTT	NA	False	NA	NA	False	NA	NA	NA	93410725	93467845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447_93461628_93462543_93462687_93464169_93464289_93466617
ES.37327.3	chrX	+	5225	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	7	-132	7	0	intron_retention	FALSE	canonical	3	325	junction_1	49.0588983794386	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93410729	93460699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
ES.37327.4	chrX	+	795	8	ISM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	8	4297	8	-4297	5prime_fragment	FALSE	canonical	3	325	junction_1	49.0588983794386	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAAGGCTCATGTTTA	NA	False	NA	NA	False	NA	NA	NA	93410730	93456270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
ES.37327.5	chrX	+	3800	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	8	-3024	8	2892	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTAGTTCTCAAGCT	NA	False	NA	NA	False	AATATA	-16	NA	93410730	93463591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ES.37327.6	chrX	+	7194	9	NNC	ENSMUSG00000079508.9	novel	784	9	NA	NA	16	2894	intron_retention	FALSE	canonical	1	1	junction_8	152.355618127459	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTTCTCAAGCTCA	NA	False	NA	NA	False	AATATA	-18	NA	93410738	93463593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93461628_93462543
ES.37327.7	chrX	+	1039	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113896.8	1032	9	-13	6	-2	-6	multi-exon	FALSE	canonical	3	7	junction_1	148.965547610849	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCTGGCCTGCTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	93410757	93460693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93410933_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ES.37327.8	chrX	+	1196	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113895.2	1173	9	-29	6	0	-6	multi-exon	FALSE	canonical	3	20	junction_1	144.775688566831	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCTGGCCTGCTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	93410759	93460693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93411092_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ES.37327.9	chrX	+	5192	7	ISM	ENSMUSG00000079508.9	ENSMUST00000113895.2	1173	9	12737	0	12737	0	intron_retention	FALSE	canonical	3	436	junction_4	14.9527032115713	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTGCTTTCTTTACT	NA	False	NA	NA	False	ATTAAA	-18	NA	93423525	93460699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065
ES.37328.1	chrX	-	2870	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	-49	0	-49	0	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585798	93579079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.12	chrX	-	3153	11	NNC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-249	0	intron_retention	FALSE	canonical	0	0	junction_10	470.704461419265	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585998	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585935
ES.37328.13	chrX	-	2657	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	437.717842590661	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585629	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579846_93580515_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.14	chrX	-	3189	10	NIC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	1240	junction_7	148.707601074336	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585598	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93581191_93581281_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.16	chrX	-	2166	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	441.559735483207	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585669	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582315_93583460_93584154_93584856_93584931_93585497
ES.37328.17	chrX	-	2664	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_12	438.490561155223	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585610	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584915_93585497
ES.37328.19	chrX	-	3217	11	NIC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	1240	junction_8	164.27967007515	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAAGTGTGCTTCTCAT	NA	False	NA	-5	True	AATAAA	-18	NA	93585625	93579082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.2	chrX	-	2974	12	FSM	ENSMUSG00000025151.17	ENSMUST00000153386.8	2884	12	-88	-2	65	0	multi-exon	FALSE	canonical	3	1240	junction_9	165.668493041908	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585684	93579079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.20	chrX	-	2777	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	425.783485340717	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAAGTGTGCTTCTCAT	NA	False	NA	-5	True	AATAAA	-18	NA	93585670	93579082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93581001_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.21	chrX	-	2489	12	NNC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-37	-1	intron_retention	FALSE	canonical	0	0	junction_9	460.780616844398	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAAGTGTGCTTCTCAT	NA	False	NA	-5	True	AATAAA	-18	NA	93585646	93579082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583904_93584154_93584856_93584931_93585497
ES.37328.22	chrX	-	2878	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	1240	junction_9	147.181453197369	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585625	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.24	chrX	-	2537	14	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	425.827617426716	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585628	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582261_93582419_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.25	chrX	-	5085	8	NIC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	1318	junction_6	170.970698050387	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585651	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212
ES.37328.27	chrX	-	2672	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	437.717842590661	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585625	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580500_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.28	chrX	-	2408	10	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	576.770724929588	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585626	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580511_93581303_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
ES.37328.29	chrX	-	2688	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	441.393461097919	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585628	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584864_93584931_93585497
ES.37328.3	chrX	-	4547	9	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	67	0	intron_retention	FALSE	canonical	3	1240	junction_8	181.758080975785	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585682	93579079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460
ES.37328.30	chrX	-	3427	10	NIC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	1240	junction_7	138.796502606523	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585651	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.31	chrX	-	3308	9	NIC	ENSMUSG00000025151.17	novel	2884	12	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	1240	junction_6	156.74975079725	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTGTGCTTCTCA	NA	False	NA	-6	True	AATAAA	-17	NA	93585628	93579083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.32	chrX	-	2626	14	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	425.827617426716	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTAAGTGTGCTT	NA	False	NA	-10	True	AATAAA	-13	NA	93585607	93579087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579157_93579201_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37328.4	chrX	-	4184	7	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-19	0	intron_retention	TRUE	canonical	3	1240	junction_5	159.464381254526	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585628	93579079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856
ES.37328.6	chrX	-	2796	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_11	424.670839962022	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585798	93579079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
ES.37328.7	chrX	-	6548	1	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	-19	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	861	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGTGCTTCTCATCT	NA	False	NA	-3	True	AATAAA	-20	NA	93585628	93579080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_93579100_93585600
ES.37328.9	chrX	-	2591	13	NNC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	442.946447728792	861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585528	93579081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581355_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ES.37329.1	chrX	-	168	1	Intergenic	novelGene_30540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTTCTATAAT	NA	False	NA	NA	False	NA	NA	NA	93639608	93639440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93639400_93639600
ES.3733.1	chr10	-	252	1	Intergenic	novelGene_2841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCCGGTTTCTCTTCTA	NA	False	NA	NA	False	AAGAAA	-36	NA	111072031	111071779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111071800_111072000
ES.37330.1	chrX	+	3640	4	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	-37	1	intron_retention	FALSE	canonical	2	4	junction_1	4.71404520791032	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGTTGGTCATAATT	4219	False	NA	3	True	NA	NA	NA	93679637	93686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93681987_93682698_93682841_93684531_93685195_93686365
ES.37330.2	chrX	+	6014	2	NIC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	-6	3	intron_retention	FALSE	canonical	2	14	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTGGTCATAATTTT	4250	False	NA	5	True	NA	NA	NA	93679668	93686853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_93685195_93686365
ES.37330.3	chrX	+	2481	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	2	8	2	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGAAATGTGTTTGA	4258	False	NA	14	True	AATAAA	-20	NA	93679676	93682157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93679700_93682200
ES.37330.4	chrX	+	7178	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	3	-4690	3	5	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGTCATAATTTTTA	4259	False	NA	7	True	NA	NA	NA	93679677	93686855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93679700_93686900
ES.37330.5	chrX	+	1925	5	FSM	ENSMUSG00000071723.8	ENSMUST00000137033.2	1925	5	1	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_1	5.1720402163943	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGTTGGTCATAATT	4264	False	NA	3	True	NA	NA	NA	93679682	93686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93680182_93681851_93681987_93682698_93682841_93684531_93685195_93686365
ES.37330.6	chrX	+	3141	5	NNC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	5.7227615711298	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATGTTGGTCATAAT	4264	False	NA	2	True	NA	NA	NA	93679682	93686850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_93681987_93682698_93682841_93684557_93684681_93685107_93685195_93686365
ES.37330.7	chrX	+	2193	2	NNC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGAAATGTGTTTGA	4264	False	NA	14	True	AATAAA	-20	NA	93679682	93682157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_93680182_93680463
ES.37330.8	chrX	+	3152	5	NNC	ENSMUSG00000071723.8	novel	1925	5	NA	NA	8	1	intron_retention	FALSE	canonical	0	0	junction_3	5.1720402163943	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGTTGGTCATAATT	4271	False	NA	3	True	NA	NA	NA	93679689	93686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_93681987_93682698_93682841_93684531_93684681_93685116_93685195_93686365
ES.37331.1	chrX	+	158	1	Intergenic	novelGene_30541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93701026	93701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93701000_93701200
ES.37332.1	chrX	-	4038	5	Intergenic	novelGene_30542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGTCCGGCCAGCA	NA	False	NA	NA	False	NA	NA	NA	93746601	93705731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93709397_93713346_93713427_93714237_93714320_93714940_93715025_93746474
ES.37333.1	chrX	+	5380	1	FSM	ENSMUSG00000073062.4	ENSMUST00000101388.4	5619	1	29	210	29	-210	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTATTTTGTCTACT	NA	False	NA	NA	False	TATAAA	-15	NA	93768203	93773583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93768200_93773600
ES.37333.2	chrX	+	5557	1	FSM	ENSMUSG00000073062.4	ENSMUST00000101388.4	5619	1	66	-4	66	4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGTCTTATTTCTTT	NA	False	NA	NA	False	AATAAA	-30	NA	93768240	93773797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_93768200_93773800
ES.37333.3	chrX	+	2323	2	Genic_Genomic	ENSMUSG00000073062.4	novel	5619	1	NA	NA	94	-2468	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATACTTTGCACTTGC	NA	False	NA	NA	False	ATTAAA	-14	NA	93768268	93771325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_93768365_93769098
ES.37333.4	chrX	+	4791	2	Genic_Genomic	ENSMUSG00000073062.4	novel	5619	1	NA	NA	103	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAATTAATGCTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	93768277	93773785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_93768395_93769111
ES.37333.5	chrX	+	5012	2	Genic_Genomic	ENSMUSG00000073062.4	novel	5619	1	NA	NA	118	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTGTGGTCTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	93768292	93773793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_93768591_93769079
ES.37333.6	chrX	+	4927	2	Genic_Genomic	ENSMUSG00000073062.4	novel	5619	1	NA	NA	426	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTAATGCTGTGGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	93768600	93773789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_93768850_93769111
ES.37334.1	chrX	+	506	1	Intergenic	novelGene_30543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCCATCCACTTTTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	93790005	93790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93790000_93790500
ES.37335.1	chrX	+	3999	1	Intergenic	novelGene_30544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTGTATTCCTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	93797248	93801247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_93797200_93801200
ES.37336.1	chrX	-	2125	1	FSM	ENSMUSG00000082776.4	ENSMUST00000118127.2	1416	1	-55	-654	-55	654	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTACTGGCTGGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	93817695	93815570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93815600_93817700
ES.37337.1	chrX	-	5700	2	Genic_Genomic	ENSMUSG00000073060.5	novel	2621	1	NA	NA	-58	3860	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAATACAT	NA	False	NA	NA	False	NA	NA	NA	93841847	93835308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_93840959_93841797
ES.37337.2	chrX	-	4599	2	Genic_Genomic	ENSMUSG00000073060.5	novel	2621	1	NA	NA	319	2713	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTCAGGAAATTTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	93841470	93836455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_93840939_93841354
ES.37337.3	chrX	-	5341	1	FSM	ENSMUSG00000073060.5	ENSMUST00000117281.2	2621	1	-8	-2712	-8	2712	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCAGGAAATTTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	93841797	93836456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93836500_93841800
ES.37337.4	chrX	-	4694	2	Genic_Genomic	ENSMUSG00000073060.5	novel	2621	1	NA	NA	-63	2711	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTCAGGAAATTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	93841852	93836457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_93840972_93841672
ES.37337.5	chrX	-	5117	1	FSM	ENSMUSG00000073060.5	ENSMUST00000117281.2	2621	1	-38	-2458	-38	2458	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTGATTTCATTTT	NA	False	NA	NA	False	TATAAA	-17	NA	93841827	93836710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93836700_93841800
ES.37337.6	chrX	-	4596	2	Genic_Genomic	ENSMUSG00000073060.5	novel	2621	1	NA	NA	-47	2458	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTGATTTCATTTT	NA	False	NA	NA	False	TATAAA	-17	NA	93841836	93836710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_93840959_93841488
ES.37337.7	chrX	-	4342	2	Genic_Genomic	ENSMUSG00000073060.5	novel	2621	1	NA	NA	241	2453	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGATGTCTTGATTTC	NA	False	NA	NA	False	TATAAA	-12	NA	93841548	93836715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_93840998_93841488
ES.37337.8	chrX	-	3119	1	FSM	ENSMUSG00000073060.5	ENSMUST00000117281.2	2621	1	-45	-453	-45	453	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTATCTTACCTTCTT	NA	False	NA	NA	False	ATTAAA	-36	NA	93841834	93838715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_93838700_93841800
ES.37338.1	chrX	-	143	1	Intergenic	novelGene_30545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAATGAATAA	NA	False	NA	NA	False	NA	NA	NA	93933868	93933725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_93933700_93933900
ES.37339.1	chrX	-	7024	1	FSM	ENSMUSG00000087522.4	ENSMUST00000142240.2	1245	1	-311	-5468	-311	5468	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94042600	94035576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94035600_94042600
ES.37339.2	chrX	-	3506	1	FSM	ENSMUSG00000087522.4	ENSMUST00000142240.2	1245	1	-372	-1889	-372	1889	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGTGGTGGGAGATGA	NA	False	NA	NA	False	NA	NA	NA	94042661	94039155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94039200_94042700
ES.37339.3	chrX	-	3131	2	Genic_Genomic	ENSMUSG00000087522.4	novel	1245	1	NA	NA	-352	1795	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTAACTTACCTGCT	NA	False	NA	NA	False	NA	NA	NA	94042641	94039249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_94039863_94040123
ES.3734.1	chr10	-	440	1	Intergenic	novelGene_2842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111090515	111090075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111090100_111090500
ES.37340.1	chrX	-	4238	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	-57	-8	-57	8	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGACTTTTGTGTTTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	94070345	94066107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94066100_94070300
ES.37340.2	chrX	-	4074	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	-3	102	-3	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACACCACCTCTTCTGC	NA	False	NA	NA	False	AATAAA	-13	NA	94070291	94066217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94066200_94070300
ES.37340.3	chrX	-	3888	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	-9	294	-9	-294	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTATAATTATCTTTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	94070297	94066409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94066400_94070300
ES.37340.4	chrX	-	3426	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	-156	903	-156	-903	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGATGCATGATTT	NA	False	NA	NA	False	NA	NA	NA	94070444	94067018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94067000_94070400
ES.37341.1	chrX	-	2579	11	NIC	ENSMUSG00000025656.18	novel	4578	11	NA	NA	-11	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.916515138991168	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTTTTTTTCGGAGAAG	2796	False	NA	NA	False	AATAAA	-20	NA	94210117	94095526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94095761_94097834_94097897_94098548_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209194
ES.37341.2	chrX	-	1818	11	NIC	ENSMUSG00000025656.18	novel	3784	11	NA	NA	-72	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.916515138991168	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGACCTTTTTTTCG	NA	False	NA	NA	False	AATAAA	-14	NA	94240183	94095532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94095761_94097834_94097897_94098548_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94240015
ES.37341.3	chrX	-	179	1	Intergenic	novelGene_30546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAGACA	9463	False	NA	NA	False	NA	NA	NA	94112860	94112681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_94112700_94112900
ES.37342.1	chrX	+	4705	1	Intergenic	novelGene_30547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	94393689	94398394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_94393700_94398400
ES.37343.1	chrX	+	179	1	Intergenic	novelGene_30548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	94427760	94427939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_94427800_94427900
ES.37344.1	chrX	+	4775	1	Intergenic	novelGene_30549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAAACGCGC	792	False	NA	NA	False	TTTAAA	-16	NA	94482677	94487452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_94482700_94487500
ES.37345.1	chrX	-	8494	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	3	-1	3	1	multi-exon	FALSE	canonical	3	18	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTGTTTTCTTGTTGTT	NA	False	NA	NA	False	AATAAA	-31	NA	94488475	94463922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94472205_94488263
ES.37345.2	chrX	-	7158	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	15	1323	15	-1323	multi-exon	FALSE	canonical	3	18	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCTATTTTTATATTG	NA	False	NA	NA	False	NA	NA	NA	94488463	94465246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94472205_94488263
ES.37345.3	chrX	-	3766	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	48	4682	48	-4682	multi-exon	FALSE	canonical	3	18	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGAGTTTTCACTTT	NA	False	NA	NA	False	GATAAA	-1	NA	94488430	94468605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94472205_94488263
ES.37345.4	chrX	-	1448	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	5	7043	5	-7043	multi-exon	FALSE	canonical	3	18	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	94488473	94470966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94472205_94488263
ES.37346.1	chrX	-	2181	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	44	-6	44	0	multi-exon	FALSE	canonical	3	32	junction_1	3.76662979332984	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGAGTGCATTCTG	925	False	NA	NA	False	AATAAA	-21	NA	94702071	94682798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
ES.37346.2	chrX	-	160	1	Intergenic	novelGene_30550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	94688858	94688698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_94688700_94688900
ES.37347.1	chrX	+	1501	5	ISM	ENSMUSG00000035045.18	ENSMUST00000150123.8	1916	7	29	24990	29	-24990	5prime_fragment	FALSE	canonical	0	0	junction_3	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTCTTTGTTGTTTGTG	NA	False	NA	NA	False	AAAACA	-31	NA	94755312	94943374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_94755753_94785510_94785578_94822500_94822576_94941870_94941961_94942545
ES.37347.2	chrX	+	7960	9	NIC	ENSMUSG00000035045.18	novel	1916	7	NA	NA	91	19	intron_retention	FALSE	canonical	0	0	junction_3	0.927024810886958	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTACCAAAGTCTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	94755374	94976262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_94755753_94785510_94785578_94822500_94822576_94941870_94941961_94942545_94943307_94965958_94966099_94968050_94968286_94968869_94968977_94970155
ES.37347.3	chrX	+	189	1	Intergenic	novelGene_30551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATAGATTTAGAATTT	NA	False	NA	NA	False	NA	NA	NA	94769421	94769610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_94769400_94769600
ES.37347.4	chrX	+	6286	1	Intergenic	novelGene_30553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAATAAAAAAGAAAATG	NA	False	NA	NA	False	ATTAAA	-34	NA	94944358	94950644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_94944400_94950600
ES.37348.1	chrX	-	178	1	Intergenic	novelGene_30552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCGAGACATCTG	NA	False	NA	NA	False	NA	NA	NA	94794576	94794398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_94794400_94794600
ES.37349.1	chrX	-	3039	14	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	20	15290	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	332.853540299545	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGTGGAAAGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	95000548	94963650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964399_94964751_94964799_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.10	chrX	-	5479	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	10	-2959	10	2959	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCATGCGAGTGAGAATA	NA	False	NA	NA	False	AATAAA	-22	NA	95000509	94975981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.13	chrX	-	2599	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	-31	-38	18	38	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGGTAAGGCAGTGTAA	NA	False	NA	2	True	AATAAA	-42	NA	95000550	94978902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.15	chrX	-	4153	11	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	7	22	intron_retention	FALSE	canonical	3	852	junction_3	60.377230807648	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGGATGTGTAAGTTG	NA	False	NA	-14	True	AATAAA	-26	NA	95000561	94978918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.17	chrX	-	2545	13	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	13	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	263.2784752986	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGGGATGTGTAAGTT	NA	False	NA	-15	True	AATAAA	-25	NA	95000506	94978919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000256
ES.37349.18	chrX	-	3777	12	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	20	intron_retention	FALSE	canonical	3	37	junction_5	266.658539821068	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGAGGGATGTGTAAGT	NA	False	NA	-16	True	AATAAA	-24	NA	95000508	94978920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991055_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.19	chrX	-	2590	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	10	-19	10	19	multi-exon	FALSE	canonical	3	26	junction_5	331.353544718678	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGAGGGATGTGTAAG	NA	False	NA	-17	True	AATAAA	-23	NA	95000509	94978921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.2	chrX	-	4619	13	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	13	15290	intron_retention	FALSE	canonical	1	2	junction_3	404.468057727952	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGTGGAAAGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	95000506	94963650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964399_94964751_94964799_94974742_94974806_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.24	chrX	-	3439	12	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	18	15	intron_retention	FALSE	canonical	3	815	junction_5	68.2767823514294	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000550	94978925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.25	chrX	-	2467	12	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	8	15	combination_of_known_splicesites	FALSE	canonical	1	11	junction_10	267.118322746882	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000511	94978925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94999480_94999607_95000263
ES.37349.27	chrX	-	3361	11	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	-23	15	intron_retention	FALSE	canonical	1	11	junction_9	279.735392826864	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGATGAGGGATGTG	NA	False	NA	-21	True	AATAAA	-19	NA	95000542	94978925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94999480_94999607_95000263
ES.37349.32	chrX	-	4021	10	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	intron_retention	FALSE	canonical	1	11	junction_8	294.836342969795	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94999480_94999607_95000263
ES.37349.33	chrX	-	4049	12	NNC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	intron_retention	TRUE	non_canonical	0	0	junction_3	277.053982268635	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984230_94984271_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.34	chrX	-	6572	10	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	intron_retention	FALSE	canonical	3	852	junction_3	61.6747742418063	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.35	chrX	-	3403	12	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	10	13	intron_retention	FALSE	non_canonical	0	0	junction_7	276.727332457287	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000509	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994970_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.36	chrX	-	2468	14	NNC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	332.358792367383	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980981_94981129_94983904_94984149_94984208_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.37	chrX	-	7113	9	NNC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	13	intron_retention	FALSE	canonical	2	3	junction_2	315.580987030271	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTGAGATGAGGGATG	NA	False	NA	-23	True	AATAAA	-17	NA	95000508	94978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983914_94984555_94990016_94990165_94990472_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.39	chrX	-	3912	10	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	23	12	intron_retention	FALSE	canonical	1	11	junction_8	293.389683139744	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTGAGATGAGGGAT	NA	False	NA	-24	True	AATAAA	-16	NA	95000545	94978928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94995796_94996827_94996910_94999480_94999607_95000263
ES.37349.4	chrX	-	3837	13	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	-1	15283	intron_retention	FALSE	canonical	2	5	junction_1	346.827887190943	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACTCGGGTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	95000493	94963657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964396_94964751_94964799_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.40	chrX	-	2538	13	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	12	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	344.098782651468	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTGAGATGAGGGAT	NA	False	NA	-24	True	AATAAA	-16	NA	95000507	94978928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980981_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993930_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.42	chrX	-	7141	8	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	12	12	intron_retention	FALSE	canonical	3	852	junction_3	65.6546313084226	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTGAGATGAGGGAT	NA	False	NA	-24	True	AATAAA	-16	NA	95000507	94978928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94995796_94996827_94999607_95000263
ES.37349.43	chrX	-	2418	12	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	23	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	270.19188161853	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTGAGATGAGGGAT	NA	False	NA	-24	True	AATAAA	-16	NA	95000545	94978928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94999560_94999607_95000263
ES.37349.44	chrX	-	3436	6	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	7191	-12	1336	12	3prime_fragment	FALSE	canonical	3	815	junction_5	88.2985843601131	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTGAGATGAGGGAT	5684	False	NA	-24	True	AATAAA	-16	NA	94993328	94978928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375
ES.37349.45	chrX	-	2646	14	NNC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	12	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	395.902160527142	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTGTGAGATGAGGGA	NA	False	NA	-25	True	AATAAA	-15	NA	95000507	94978929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991132_94991375_94991462_94993942_94994053_94994915_94994957_94995518_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.48	chrX	-	6572	10	NNC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	9	intron_retention	FALSE	non_canonical	0	0	junction_5	305.277327873493	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTGTGAGATGAGG	NA	False	NA	-27	True	AATAAA	-13	NA	95000508	94978931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94994972_94995518_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.49	chrX	-	3442	13	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	11	9	intron_retention	FALSE	canonical	3	26	junction_5	344.035326028528	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTGTGAGATGAGG	NA	False	NA	-27	True	AATAAA	-13	NA	95000508	94978931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.5	chrX	-	3047	15	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	12	15283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	414.636237181066	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACTCGGGTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	95000507	94963657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964396_94964751_94964799_94974742_94974806_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000267
ES.37349.55	chrX	-	6475	9	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	10	7	intron_retention	FALSE	canonical	3	852	junction_3	64.1052601195877	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTTTGTGAGATGA	NA	False	NA	-29	True	AATAAA	-11	NA	95000509	94978933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94995796_94996827_94998818_94999480_94999607_95000263
ES.37349.56	chrX	-	2509	13	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	11	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	336.470735065556	714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTTTGTGAGATG	NA	False	NA	-30	True	AATAAA	-10	NA	95000508	94978934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94979256_94980977_94981126_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994928_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.7	chrX	-	4759	13	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	11	15281	intron_retention	FALSE	canonical	0	0	junction_3	404.757429071894	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGCAACTCGGGTGGAA	NA	False	NA	NA	False	NA	NA	NA	95000508	94963659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964399_94964751_94964799_94974742_94974953_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.8	chrX	-	3924	14	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	10	15280	intron_retention	FALSE	canonical	0	0	junction_2	391.125307180652	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCAACTCGGGTGGA	NA	False	NA	NA	False	NA	NA	NA	95000509	94963660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964399_94964751_94964799_94980654_94980726_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.37349.9	chrX	-	2886	14	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	11	15180	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	334.450445644367	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGATGTCATTTAA	NA	False	NA	NA	False	NA	NA	NA	95000508	94963760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_94964396_94964751_94964799_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ES.3735.1	chr10	-	174	1	Intergenic	novelGene_2843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGCAAGAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	111092960	111092786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111092800_111093000
ES.37350.1	chrX	+	2488	1	Intergenic	novelGene_30560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTGTTTGGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	95004910	95007398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_95004900_95007400
ES.37351.1	chrX	-	4803	4	Intergenic	novelGene_30554	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	1.24721912892465	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGTATGTGTAAGATT	NA	False	NA	2	True	NA	NA	NA	95011494	95004071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695
ES.37351.2	chrX	-	2774	5	Intergenic	novelGene_30555	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_4	7.15454401062709	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGTATGTGTAAGATT	NA	False	NA	2	True	NA	NA	NA	95011667	95004071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95011076
ES.37351.3	chrX	-	2348	5	Intergenic	novelGene_30556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_4	9.30053761886914	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGTGTATGTGTAAGA	NA	False	NA	0	True	NA	NA	NA	95012253	95004073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95012086
ES.37351.4	chrX	-	2525	6	Intergenic	novelGene_30558	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.0169120762184	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACTATGTGTATGTGTA	NA	False	NA	-3	True	NA	NA	NA	95011350	95004076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006026_95006068_95006619_95006707_95008523_95008599_95008695_95008875_95011044
ES.37351.5	chrX	-	2441	4	Intergenic	novelGene_30559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	12.0277457017791	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACTATGTGTATGTGTA	NA	False	NA	-3	True	NA	NA	NA	95011518	95004076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95011076
ES.37351.6	chrX	-	2296	5	Intergenic	novelGene_30557	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_4	10.5918600821574	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACTATGTGTATGTGTA	NA	False	NA	-3	True	NA	NA	NA	95011334	95004076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008735_95011076
ES.37352.1	chrX	+	228	1	Intergenic	novelGene_30561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGATAGCATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	95125591	95125819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_95125600_95125800
ES.37353.1	chrX	-	179	1	Intergenic	novelGene_30562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGGACA	NA	False	NA	NA	False	NA	NA	NA	95126615	95126436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95126400_95126600
ES.37354.1	chrX	+	2080	5	NNC	ENSMUSG00000031207.17	novel	1883	4	NA	NA	-538	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	549.664158827916	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATAGGTGACTAAAGA	NA	False	NA	NA	False	NA	NA	NA	95139109	95197665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139317_95139692_95139850_95185470_95185555_95194225_95194322_95196129
ES.37354.12	chrX	+	1917	4	FSM	ENSMUSG00000031207.17	ENSMUST00000149985.8	1883	4	-14	-20	1	20	multi-exon	FALSE	canonical	3	1220	junction_3	48.6095555306659	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATAGGTGACTAAAGA	NA	False	NA	NA	False	NA	NA	NA	95139648	95197665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129
ES.37354.13	chrX	+	3246	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	1	595	1	-595	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTTTGCTAATGCACT	NA	False	NA	NA	False	NA	NA	NA	95139648	95211563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.14	chrX	+	3814	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	324.491354104988	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGACTCAGTCTTTC	NA	False	NA	4	True	AATAAA	-14	NA	95139648	95212156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210100
ES.37354.15	chrX	+	3793	14	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	312.456235988793	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139648	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209654_95209701_95209756_95210075
ES.37354.16	chrX	+	3762	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	2	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	318.281594745469	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTTTCTGTATATC	NA	False	NA	12	True	AATAAA	-22	NA	95139649	95212164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95139850_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.19	chrX	+	3836	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	324.429873864223	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139651	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196416_95197913_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.2	chrX	+	3878	14	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-405	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.456235988793	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTTCTGTATATCT	NA	False	NA	13	True	AATAAA	-23	NA	95139242	95212165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139317_95139692_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.22	chrX	+	3592	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	50	200	-5	-200	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTCAAACCTGGAATTG	NA	False	NA	-75	True	NA	NA	NA	95139697	95211958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.25	chrX	+	3881	14	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	403.024453425808	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139698	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95175602_95175693_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.27	chrX	+	3763	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319.144298606968	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139699	95212159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194253_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.28	chrX	+	3607	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	325.043191574426	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGACTCAGTCTTTC	NA	False	NA	4	True	AATAAA	-14	NA	95139699	95212156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207055_95207487_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.29	chrX	+	3669	14	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	312.456235988793	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139700	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95211546_95211665
ES.37354.3	chrX	+	4050	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	-201	-7	-201	7	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTTCTGTATATCT	NA	False	NA	13	True	AATAAA	-23	NA	95139446	95212165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.31	chrX	+	5534	11	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	982	junction_8	101.809822708813	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGACTCAGTCTTTC	NA	False	NA	4	True	AATAAA	-14	NA	95139701	95212156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.32	chrX	+	3922	14	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	403.558095067705	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGACTCAGTCTTTCT	NA	False	NA	5	True	AATAAA	-15	NA	95139714	95212157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95178515_95178664_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.33	chrX	+	3727	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	1039	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.718845592793	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95140741	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95140829_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.34	chrX	+	3723	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	38435	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.718845592793	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGACTCAGTCTTTC	NA	False	NA	4	True	AATAAA	-14	NA	95178137	95212156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95178223_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.35	chrX	+	3100	8	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	59420	3	59365	-3	3prime_fragment	FALSE	canonical	3	982	junction_5	39.8133399856923	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTATGACTCAGTCTTT	NA	False	NA	3	True	AATAAA	-13	NA	95199067	95212155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.36	chrX	+	2625	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	69109	0	69054	0	3prime_fragment	FALSE	canonical	3	1072	junction_1	18	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95208756	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_95209074_95209530_95209756_95210075
ES.37354.4	chrX	+	5383	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-44	1	intron_retention	FALSE	canonical	3	982	junction_9	98.4644081352317	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139603	95212159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.5	chrX	+	4342	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-43	0	intron_retention	FALSE	canonical	3	982	junction_10	97.2523343109337	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139604	95212158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209756_95210075
ES.37354.6	chrX	+	3788	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	-41	1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	325.017329480768	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139606	95212159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95139850_95185470_95185555_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.7	chrX	+	3481	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	-33	394	-33	-394	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTTGGTTTTATT	NA	False	NA	NA	False	AATACA	-11	NA	95139614	95211764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.8	chrX	+	2069	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	-30	1803	-30	-1803	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACGTTCAGTATAGCCAT	NA	False	NA	NA	False	NA	NA	NA	95139617	95210355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ES.37354.9	chrX	+	3837	13	NNC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	325.033288893444	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	False	NA	7	True	AATAAA	-17	NA	95139647	95212159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209536_95209756_95210075
ES.37355.1	chrX	-	172	1	Intergenic	novelGene_30563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	95248083	95247911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_95247900_95248100
ES.37356.1	chrX	-	2997	11	NIC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-232	2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	7.69675256195754	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGGCATCATGT	NA	False	NA	NA	False	AATAAA	-12	NA	95411757	95349781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_95351419_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
ES.37356.2	chrX	-	3058	12	FSM	ENSMUSG00000045802.14	ENSMUST00000059003.5	1479	12	-233	-1346	-233	1	multi-exon	FALSE	canonical	2	9	junction_1	7.96998501611043	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTCATGGCATCATG	NA	False	NA	NA	False	AATAAA	-11	NA	95411758	95349782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
ES.37356.3	chrX	-	3125	11	NIC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-114	0	intron_retention	FALSE	canonical	2	9	junction_1	8.31925477431723	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCATGGCATCAT	NA	False	NA	NA	False	AATAAA	-10	NA	95411639	95349783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
ES.37356.4	chrX	-	2793	10	NIC	ENSMUSG00000045802.14	novel	2691	11	NA	NA	-158	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	9.13006159296628	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCATGGCATCAT	NA	False	NA	NA	False	AATAAA	-10	NA	95411683	95349783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_95351419_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95400740_95400850_95411426
ES.37356.5	chrX	-	2926	12	NNC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	7.85088298450331	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCATGGCATCAT	NA	False	NA	NA	False	AATAAA	-10	NA	95411638	95349783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400839_95411426
ES.37356.6	chrX	-	1155	8	NNC	ENSMUSG00000045802.14	novel	1479	12	NA	NA	-113	530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.3443323977668	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGTTTGACTTGAATT	NA	False	NA	NA	False	CATAAA	-18	NA	95411638	95363752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373028_95373245_95382022_95382151_95400740_95400850_95411426
ES.37356.7	chrX	-	1995	3	NNC	ENSMUSG00000045802.14	novel	2691	11	NA	NA	-162	-22026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTACACTTTTCTTATCC	NA	False	NA	NA	False	NA	NA	NA	95411687	95386308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_95387934_95400740_95400850_95411426
ES.37357.1	chrX	+	4645	22	FSM	ENSMUSG00000031209.15	ENSMUST00000113838.8	4611	22	-34	0	-17	0	multi-exon	FALSE	canonical	2	3	junction_1	3.14141380999441	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGTGATTTTTGTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	95499961	95618088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95500222_95503180_95503376_95506496_95506698_95509415_95509661_95513550_95513764_95514338_95514522_95516417_95516673_95518983_95519153_95527636_95527774_95529832_95529965_95541453_95541663_95542592_95542744_95544112_95544326_95571115_95571330_95573006_95573147_95573899_95574032_95597448_95597556_95598440_95598667_95601115_95601256_95601644_95601808_95614585_95614631_95617173
ES.37357.2	chrX	+	4326	21	NIC	ENSMUSG00000031209.15	novel	4611	22	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.74799946638203	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGATTTTTGTGATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	95499962	95618091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95500222_95506496_95506698_95509415_95509661_95513550_95513764_95514338_95514522_95516417_95516673_95518983_95519153_95527636_95527774_95529832_95529965_95541579_95541663_95542592_95542744_95544112_95544326_95571115_95571330_95573006_95573147_95573899_95574032_95597448_95597556_95598440_95598667_95601115_95601256_95601644_95601808_95614585_95614631_95617173
ES.37357.3	chrX	+	4432	21	NIC	ENSMUSG00000031209.15	novel	4611	22	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	3.17962261911693	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGATTTTTGTGATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	95499982	95618091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95500222_95506496_95506698_95509415_95509661_95513550_95513764_95514338_95514522_95516417_95516673_95518983_95519153_95527636_95527774_95529832_95529965_95541453_95541663_95542592_95542744_95544112_95544326_95571115_95571330_95573006_95573147_95573899_95574032_95597448_95597556_95598440_95598667_95601115_95601256_95601644_95601808_95614585_95614631_95617173
ES.37357.4	chrX	+	4498	22	NIC	ENSMUSG00000031209.15	novel	4611	22	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	3.68117106477861	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGATTTTTGTGATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	95499985	95618091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_95500222_95503180_95503376_95506496_95506698_95509415_95509661_95513550_95513764_95514338_95514522_95516417_95516673_95518983_95519153_95527636_95527774_95529832_95529965_95541579_95541663_95542592_95542744_95544112_95544326_95571115_95571330_95573006_95573147_95573899_95574032_95597448_95597556_95598440_95598667_95601115_95601256_95601644_95601808_95614585_95614631_95617173
ES.37357.5	chrX	+	651	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGGAAAAATATCATTC	NA	False	NA	NA	False	AATAAA	-44	NA	95528464	95529115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_95528500_95529100
ES.37358.1	chrX	+	5404	5	FSM	ENSMUSG00000031212.4	ENSMUST00000033556.4	5379	5	-22	-3	-22	3	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTATTTCTTTCATT	331	False	NA	NA	False	AATAAA	-16	NA	96116179	96125713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_96116381_96119519_96120010_96120212_96120339_96120721_96120856_96121260
ES.37359.1	chrX	+	84	1	Intergenic	novelGene_30564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	96191579	96191663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_96191600_96191700
ES.3736.1	chr10	+	2774	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	-21	-9	-21	9	multi-exon	FALSE	canonical	3	23	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTAATTGTCCTTGTGGT	NA	False	NA	NA	False	AATAAA	-29	NA	111134518	111137597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111134769_111135073
ES.3736.2	chr10	+	3039	1	FSM	ENSMUSG00000035759.5	ENSMUST00000219990.2	3047	1	10	-2	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCATGTAAGTTAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	111134549	111137588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111134500_111137600
ES.3736.3	chr10	+	3344	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	40	-640	40	640	multi-exon	FALSE	canonical	3	23	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATACTAGGCTGGACA	NA	False	NA	NA	False	AATAAA	-15	NA	111134579	111138228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111134769_111135073
ES.37360.1	chrX	+	1604	1	Intergenic	novelGene_30565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	234	False	NA	NA	False	NA	NA	NA	96334572	96336176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_96334600_96336200
ES.37361.1	chrX	-	2929	7	NNC	ENSMUSG00000034457.11	novel	779	6	NA	NA	-19	39141	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.23867867238	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAATCATGT	NA	False	NA	NA	False	NA	NA	NA	96420797	96338304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96340518_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.10	chrX	-	6063	7	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	-7	3	intron_retention	FALSE	canonical	2	2	junction_2	41.3860550856874	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420785	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386904_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.11	chrX	-	4330	7	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-19	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.8744938421694	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420797	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_96381057_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.12	chrX	-	6169	7	NIC	ENSMUSG00000034457.11	novel	1433	8	NA	NA	-17	3	intron_retention	FALSE	canonical	3	11	junction_6	38.9419083022676	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420839	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
ES.37361.13	chrX	-	3118	8	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.505202803316	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420785	96377445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96378290_96381229_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420715
ES.37361.14	chrX	-	3819	8	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.7876531938432	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420797	96377445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96380149_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.15	chrX	-	6045	7	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	6	0	intron_retention	FALSE	canonical	2	5	junction_6	41.1234591065597	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420772	96377445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420715
ES.37361.17	chrX	-	3722	9	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGCCTTGTTTATTC	NA	False	NA	-26	True	AATAAA	-11	NA	96420770	96377448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96379608_96379674_96380149_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.18	chrX	-	6311	7	NNC	ENSMUSG00000034457.11	novel	1433	8	NA	NA	643	-3	intron_retention	FALSE	canonical	0	0	junction_6	42.9457021520586	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGCCTTGTTTATTC	NA	False	NA	-26	True	AATAAA	-11	NA	96420113	96377448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96419832
ES.37361.19	chrX	-	4313	10	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5653726285478	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATGCCTTGTTTATTC	NA	False	NA	-26	True	AATAAA	-11	NA	96420815	96377448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96378247_96378628_96378814_96378860_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.2	chrX	-	7576	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	36	-5459	-8	1508	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCATGATCACTGATCT	NA	False	NA	NA	False	NA	NA	NA	96420786	96375937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.20	chrX	-	2148	7	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	9	13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	41.1234591065597	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCATAATTGTATCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	96420813	96381383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420715
ES.37361.21	chrX	-	2175	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-17	-5	-17	5	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGTGTAAAAAGCATAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	96420839	96381391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.22	chrX	-	4390	1	Intergenic	novelGene_30566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	96392190	96387800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_96387800_96392200
ES.37361.23	chrX	-	8378	2	ISM	ENSMUSG00000034457.11	ENSMUST00000126609.2	779	6	-8	21412	-8	-21412	5prime_fragment	FALSE	canonical	3	120	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	96420786	96406563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_96414862_96420706
ES.37361.24	chrX	-	3121	1	Genic_Genomic	ENSMUSG00000034457.11	novel	NA	NA	NA	NA	-13	-32563	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACCAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96420835	96417714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_96417700_96420800
ES.37361.3	chrX	-	4299	10	NNC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	-7	1501	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	51.5653726285478	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATTTCATGATCA	NA	False	NA	NA	False	NA	NA	NA	96420785	96375944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96376556_96378426_96378475_96378520_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.4	chrX	-	4797	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	-13	-32	-13	32	multi-exon	FALSE	canonical	3	19	junction_1	34.3130843134516	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTGACTCATTCAAT	NA	False	NA	9	True	NA	NA	NA	96420835	96377413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.5	chrX	-	6152	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	-17	-3982	-17	31	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTGTGACTCATTCAA	NA	False	NA	8	True	AATAAA	-45	NA	96420839	96377414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.6	chrX	-	5651	5	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	-7	12	intron_retention	FALSE	non_canonical	0	0	junction_1	48.1994553911141	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTCGGCTTTCAGTGA	NA	False	NA	-11	True	AATAAA	-26	NA	96420785	96377433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382750_96387619_96387681_96405366_96405465_96414764_96414862_96420706
ES.37361.7	chrX	-	5904	6	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	-17	3	intron_retention	FALSE	non_canonical	0	0	junction_4	47.7577218887166	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420839	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387607_96414812_96414862_96420706
ES.37361.8	chrX	-	4764	8	FSM	ENSMUSG00000034457.11	ENSMUST00000113832.2	1433	8	-30	-3301	-8	3	multi-exon	FALSE	canonical	3	11	junction_7	44.9743691178767	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420786	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
ES.37361.9	chrX	-	6494	7	NNC	ENSMUSG00000034457.11	novel	2153	7	NA	NA	421	3	intron_retention	FALSE	canonical	1	2	junction_6	42.2163738639668	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	False	NA	-20	True	AATAAA	-17	NA	96420335	96377442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96419832
ES.37362.1	chrX	-	7237	2	Intergenic	novelGene_30567	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97020138	97012695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_97018903_97019108
ES.37362.2	chrX	-	7232	2	Intergenic	novelGene_30568	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97020138	97012699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_97019007_97019213
ES.37363.1	chrX	+	7285	8	FSM	ENSMUSG00000046532.9	ENSMUST00000052837.9	10048	8	-64	2827	-64	-2827	multi-exon	FALSE	canonical	0	0	junction_1	1.03015750727543	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAAAAAAGCTTCAC	NA	False	NA	NA	False	NA	NA	NA	97192310	97363994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97194941_97295291_97295444_97330194_97330312_97348842_97349131_97354583_97354729_97358481_97358613_97359457_97359616_97360330
ES.37364.1	chrX	-	307	1	Intergenic	novelGene_30569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCGGTAACCTCATTGT	NA	False	NA	NA	False	NA	NA	NA	97589497	97589190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_97589200_97589500
ES.37365.1	chrX	+	204	1	Intergenic	novelGene_30571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATAGTAATAGCTTT	NA	False	NA	NA	False	NA	NA	NA	97813223	97813427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_97813200_97813400
ES.37366.1	chrX	-	6446	1	Genic_Genomic	ENSMUSG00000031214.14	novel	NA	NA	NA	NA	19660	1947	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	97602381	97595935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_97595900_97602400
ES.37366.10	chrX	-	3752	24	NNC	ENSMUSG00000031214.14	novel	7170	25	NA	NA	108	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	6.32276171383843	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACGTGTTTGTTTCTCC	NA	False	NA	NA	False	TATAAA	-19	NA	97934107	97601861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97756507_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
ES.37366.11	chrX	-	1630	1	Intergenic	novelGene_30570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCCCTACATATAGCAT	NA	False	NA	NA	False	NA	NA	NA	97648414	97646784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_97646800_97648400
ES.37366.2	chrX	-	3970	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	-86	3286	-46	688	multi-exon	TRUE	canonical	1	4	junction_23	4.90959944055181	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACCTCCAGCTTACATG	NA	False	NA	NA	False	NA	NA	NA	97934677	97601168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
ES.37366.3	chrX	-	3618	26	FSM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	-193	-631	11	631	multi-exon	FALSE	canonical	0	0	junction_25	5.66307337052947	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGGTCAAATGTTAGGA	NA	False	NA	NA	False	AATAAA	-36	NA	97934580	97601225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986_97934106_97934303
ES.37366.4	chrX	-	2421	16	NNC	ENSMUSG00000031214.14	novel	7170	25	NA	NA	-130139	619	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	5.49181208709839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGGGGT	NA	False	NA	NA	False	AATAAA	-24	NA	97752234	97601237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97752071
ES.37366.5	chrX	-	2159	17	NNC	ENSMUSG00000031214.14	novel	7170	25	NA	NA	-130119	335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.1490821089144	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGTGGATGCTGACTA	NA	False	NA	NA	False	NA	NA	NA	97752214	97601521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97607897_97607940_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97752071
ES.37366.6	chrX	-	3352	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	12	3806	12	168	multi-exon	FALSE	canonical	1	4	junction_23	4.90959944055181	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTTGTTTCCGCAAAC	NA	False	NA	NA	False	AATAGA	-24	NA	97934579	97601688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
ES.37366.7	chrX	-	3225	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	-29	3974	11	0	multi-exon	FALSE	canonical	1	4	junction_23	4.90959944055181	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTGTTTCTCCTTTGT	NA	False	NA	NA	False	TATAAA	-24	NA	97934620	97601856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
ES.37366.8	chrX	-	2895	26	NNC	ENSMUSG00000031214.14	novel	2794	26	NA	NA	77	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	5.66307337052947	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTTTGTTTCTCCTTTG	NA	False	NA	NA	False	TATAAA	-23	NA	97934514	97601857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986_97934106_97934328
ES.37366.9	chrX	-	1778	16	NNC	ENSMUSG00000031214.14	novel	7170	25	NA	NA	-130120	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	5.49181208709839	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACGTGTTTGTTTCTCC	NA	False	NA	NA	False	TATAAA	-19	NA	97752215	97601861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97752071
ES.37367.1	chrX	+	4142	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	196	-857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4662255638889	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCAGCAGTCCTTACT	NA	False	NA	26	True	NA	NA	NA	97980117	97991766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980331_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.10	chrX	+	3963	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-972	2220	473	1666	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCATACTTCTCAAATTT	NA	False	NA	NA	False	NA	NA	NA	97980394	97990403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.11	chrX	+	4067	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-474	-875	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.1240206839852	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97980404	97991748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980561_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.12	chrX	+	4200	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-841	1852	-353	-1852	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGCTTTCTATGACAA	NA	False	NA	NA	False	ATTAAA	-39	NA	97980525	97990771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.13	chrX	+	4127	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-279	-875	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	84.7558317781624	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97980599	97991748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980816_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.14	chrX	+	5928	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-718	1	-230	-1	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTGTGTCTGCCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	97980648	97992622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.15	chrX	+	1896	9	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-215	-1068	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	105.14127400788	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCATGTATGTAAATTAG	NA	False	NA	NA	False	AATAAA	-17	NA	97980663	97991555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980756_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478_97988932_97990845
ES.37367.16	chrX	+	1153	8	NIC	ENSMUSG00000047694.13	novel	690	7	NA	NA	-207	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	83.3886890974295	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTGATATTTGCAAG	NA	False	NA	23	True	ATTAAA	-33	NA	97980671	97988734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_97980928_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.17	chrX	+	2723	9	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-199	-880	intron_retention	FALSE	canonical	1	1	junction_7	105.14127400788	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTCATCCTTTCAAGG	NA	False	NA	3	True	TTTAAA	-40	NA	97980679	97991743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478_97988932_97990845_97990938_97991318
ES.37367.18	chrX	+	3804	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-196	-1055	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	85.4397985933574	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGAGGTCCTCCTCTA	NA	False	NA	NA	False	AATAAA	-30	NA	97980682	97991568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980756_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.19	chrX	+	2507	8	NIC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-189	1318	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	86.4662255638889	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAATTTTTCTCAT	NA	False	NA	NA	False	TATAAA	-12	NA	97980689	97990055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_97980979_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.21	chrX	+	3074	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-171	-882	intron_retention	FALSE	canonical	1	1	junction_7	86.1240206839852	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATTCATCCTTTCAA	NA	False	NA	1	True	TTTAAA	-38	NA	97980707	97991741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478_97988932_97990845
ES.37367.22	chrX	+	4983	8	NIC	ENSMUSG00000047694.13	novel	690	7	NA	NA	-150	-2	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	83.3886890974295	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAATTTGTGTCTGCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	97980728	97992621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_97980928_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.23	chrX	+	7632	3	ISM	ENSMUSG00000047694.13	ENSMUST00000113811.8	930	8	808	-1328	-149	1328	intron_retention	FALSE	canonical	3	253	junction_1	9	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTCATTCTCAAAGTA	NA	False	NA	NA	False	TATAAA	-22	NA	97980729	97990065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_97981895_97983378_97983508_97983727
ES.37367.24	chrX	+	6209	6	FSM	ENSMUSG00000047694.13	ENSMUST00000140479.2	1020	6	-1082	-4107	-148	-875	multi-exon	FALSE	canonical	3	239	junction_3	12.2376468326227	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97980730	97991748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083
ES.37367.25	chrX	+	4597	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-440	1054	20	-1054	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGAGGTCCTCCTCTAG	NA	False	NA	NA	False	AATAAA	-31	NA	97980926	97991569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.26	chrX	+	5218	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	170	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.4662255638889	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAATTTGTGTCTGCCT	NA	False	NA	NA	False	AATAAA	-13	NA	97981076	97992620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97981086_97981365_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.27	chrX	+	5101	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-20	130	-20	-130	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTTCCTTTCTGGTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	97981346	97992493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.28	chrX	+	5991	6	FSM	ENSMUSG00000047694.13	ENSMUST00000140479.2	1020	6	-40	-4931	-40	-51	multi-exon	FALSE	canonical	3	239	junction_3	12.2376468326227	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGGTTTGTGGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	97981772	97992572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083
ES.37367.29	chrX	+	3593	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	432	1186	-14	-1186	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTGGGTACCATCAA	NA	False	NA	NA	False	AATGAA	-14	NA	97981798	97991437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.3	chrX	+	1504	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	244	439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4662255638889	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTTTTGTATACTT	NA	False	NA	NA	False	NA	NA	NA	97980165	97989176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980331_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.30	chrX	+	3897	7	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	-14	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1788535425475	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97981798	97991748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97981895_97983385_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.31	chrX	+	6452	5	FSM	ENSMUSG00000047694.13	ENSMUST00000149082.8	2908	5	434	-3978	-12	-133	multi-exon	FALSE	canonical	3	239	junction_3	13.1434394280949	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGTTCCTTTCTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	97981800	97992490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383
ES.37367.32	chrX	+	5513	5	FSM	ENSMUSG00000047694.13	ENSMUST00000149082.8	2908	5	439	-3044	-7	-1067	multi-exon	FALSE	canonical	3	239	junction_3	13.1434394280949	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATGTATGTAAATTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	97981805	97991556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383
ES.37367.33	chrX	+	3854	7	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	6	-875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.120693778446	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97981818	97991748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986507_97987107_97987242_97988478
ES.37367.34	chrX	+	7939	5	NIC	ENSMUSG00000047694.13	novel	1020	6	NA	NA	9	-2	intron_retention	FALSE	canonical	3	239	junction_3	12.5374439181198	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAATTTGTGTCTGCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	97981821	97992621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97986513_97987083
ES.37367.4	chrX	+	4955	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	244	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.4662255638889	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTGCCTTTGTAGT	NA	False	NA	NA	False	AATAAA	-20	NA	97980165	97992627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980331_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.5	chrX	+	4194	4	ISM	ENSMUSG00000047694.13	ENSMUST00000113811.8	930	8	244	2088	244	-592	intron_retention	FALSE	canonical	3	239	junction_3	13.0979218029257	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGAAATGAATTTTAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	97980165	97986649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392
ES.37367.6	chrX	+	4842	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	244	-54	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.1240206839852	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAAATGGTTTGTGGA	NA	False	NA	NA	False	AATAAA	-15	NA	97980165	97992569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980276_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.7	chrX	+	4001	8	NNC	ENSMUSG00000047694.13	novel	5211	7	NA	NA	260	-879	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	86.1240206839852	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCATCCTTTCAAGGT	NA	False	NA	4	True	TTTAAA	-41	NA	97980181	97991744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_97980276_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.8	chrX	+	5334	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-994	871	451	-871	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCAAGGTGTACAATT	NA	False	NA	12	True	NA	NA	NA	97980372	97991752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37367.9	chrX	+	3621	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	-972	2562	473	1324	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTCTCATTCTCAA	NA	False	NA	NA	False	TATAAA	-18	NA	97980394	97990061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ES.37368.1	chrX	-	1006	1	Antisense	novelGene_ENSMUSG00000047694.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97981043	97980037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_97980000_97981000
ES.37369.1	chrX	+	4605	15	NIC	ENSMUSG00000031216.14	novel	631	6	NA	NA	-51	-493	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	15.9322545389495	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTCCTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98046802	98117841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_98047118_98060522_98060557_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.10	chrX	+	4586	15	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	62	-496	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.1452018258446	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAGTGTCCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	98086248	98117838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98086401_98092386_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.11	chrX	+	4861	15	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	63	-220	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.1452018258446	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATATATGTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	98086249	98118114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98086401_98092386_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.12	chrX	+	3980	1	NIC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	68	-19044	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	98086254	98090234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_98086300_98090200
ES.37369.13	chrX	+	4809	13	NIC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	72	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13.6950923894494	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086258	98118334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_98086401_98104333_98104406_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.14	chrX	+	5442	15	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.6955497914664	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCTCTGGAGAGTTT	NA	False	NA	2	True	AATAAA	-17	NA	98086258	98118333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98086401_98092015_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.16	chrX	+	5200	15	NNC	ENSMUSG00000031216.14	novel	759	4	NA	NA	3604	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.6955497914664	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGAGAGTTTGTTTTG	NA	False	NA	8	True	AATAAA	-23	NA	98091193	98118339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98091459_98092386_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.17	chrX	+	4783	14	NNC	ENSMUSG00000031216.14	novel	759	4	NA	NA	8495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6818138437238	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98096084	98118334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98096119_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.18	chrX	+	4533	10	ISM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	22974	1	-3053	-1	3prime_fragment	FALSE	canonical	3	36	junction_4	5.59761854124889	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCTCTGGAGAGTTT	NA	False	NA	2	True	AATAAA	-17	NA	98109160	98118333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.19	chrX	+	3127	9	ISM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	25005	1	-1022	-1	3prime_fragment	FALSE	canonical	3	36	junction_3	5.91607978309962	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGCTCTGGAGAGTTT	NA	False	NA	2	True	AATAAA	-17	NA	98111191	98118333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.2	chrX	+	5088	15	NIC	ENSMUSG00000031216.14	novel	631	6	NA	NA	-34	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	15.9322545389495	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGAGTTTGTTTTGCT	NA	False	NA	10	True	AATAAA	-25	NA	98046819	98118341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_98047118_98060522_98060557_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.20	chrX	+	2617	7	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	919	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.8695979007602	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTGGCTCTGGAGAGT	NA	False	NA	0	True	AATAAA	-15	NA	98113132	98118331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98113161_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.3	chrX	+	175	1	Intergenic	novelGene_30572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGAACCAATGTT	NA	False	NA	NA	False	NA	NA	NA	98072795	98072970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_98072800_98073000
ES.37369.4	chrX	+	5121	15	NNC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.1452018258446	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086209	98118334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98086401_98092386_98092568_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.5	chrX	+	4938	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	28	-3	28	3	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGGAGAGTTTGTTT	NA	False	NA	6	True	AATAAA	-21	NA	98086214	98118337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.6	chrX	+	4438	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	32	493	32	-493	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTCCTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98086218	98117841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.7	chrX	+	4701	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	43	219	43	-219	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATATGTGTATGTGTA	NA	False	NA	NA	False	NA	NA	NA	98086229	98118115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.8	chrX	+	4170	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	53	740	53	-740	multi-exon	FALSE	canonical	3	27	junction_1	6.60016137511158	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTTTTGCCTACAGT	NA	False	NA	NA	False	AATACA	-10	NA	98086239	98117594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.37369.9	chrX	+	4335	13	NIC	ENSMUSG00000031216.14	novel	4963	14	NA	NA	53	-493	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13.6950923894494	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTCCTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98086239	98117841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_98086401_98104333_98104406_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ES.3737.1	chr10	-	181	1	Intergenic	novelGene_2845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAATAACTGTTCA	NA	False	NA	NA	False	NA	NA	NA	111246581	111246400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111246400_111246600
ES.37370.1	chrX	-	4788	1	Antisense	novelGene_ENSMUSG00000031216.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATCTTTTTTGTGTACC	NA	False	NA	NA	False	NA	NA	NA	98104615	98099827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_98099800_98104600
ES.37371.1	chrX	+	3350	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	-57	-35	-57	35	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGTAAACTAGTGTCAT	NA	False	NA	87	True	NA	NA	NA	98179678	98192632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ES.37371.2	chrX	+	3190	6	NNC	ENSMUSG00000031217.9	novel	3258	5	NA	NA	-50	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	16.3340135912763	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTTCTTGTTGCTTT	NA	False	NA	9	True	TATAAA	-6	NA	98179685	98192554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720_98191698_98191772
ES.37371.3	chrX	+	3258	6	NNC	ENSMUSG00000031217.9	novel	3258	5	NA	NA	-32	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	16.3340135912763	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGTAAACTAGTGTCAT	NA	False	NA	87	True	NA	NA	NA	98179703	98192632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720_98190804_98190870
ES.37371.4	chrX	+	1548	3	NNC	ENSMUSG00000031217.9	novel	3258	5	NA	NA	0	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.5	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTATTTTCTTGTTGCT	NA	False	NA	7	True	TATAAA	-4	NA	98179735	98192552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_98180620_98188897_98189159_98192149
ES.37371.5	chrX	+	6250	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	0	-2992	0	2992	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTCTAAAGTCAGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	98179735	98195589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ES.37372.1	chrX	+	251	1	Intergenic	novelGene_30573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTATTACCCTAATCA	NA	False	NA	NA	False	NA	NA	NA	98364386	98364637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_98364400_98364600
ES.37373.1	chrX	+	793	3	FSM	ENSMUSG00000085553.2	ENSMUST00000129259.2	361	3	92	-524	92	524	multi-exon	TRUE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGCTCTTGCCTGTG	NA	False	NA	NA	False	NA	NA	NA	98502722	98504883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98502763_98503182_98503300_98504247
ES.37374.1	chrX	-	2958	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-19	-376	-19	0	multi-exon	FALSE	canonical	3	84	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTGCGCTTACACA	NA	False	NA	NA	False	NA	NA	NA	98514317	98509343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98512207_98514222
ES.37374.10	chrX	-	4262	1	NIC	ENSMUSG00000034403.17	novel	3038	3	NA	NA	-19	-304	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGATTCCTTGTGATT	NA	False	NA	NA	False	ACTAAA	-1	NA	98514317	98510055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_98510100_98514300
ES.37374.11	chrX	-	1948	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	33	685	-10	-307	multi-exon	FALSE	canonical	3	379	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTGATTCCTTGTG	NA	False	NA	NA	False	AATGAA	-21	NA	98514308	98510058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511921_98514222
ES.37374.12	chrX	-	2215	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	6	342	1	-310	multi-exon	FALSE	canonical	3	84	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGTTGTTGATTCCTT	NA	False	NA	NA	False	AATGAA	-18	NA	98514292	98510061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98512207_98514222
ES.37374.2	chrX	-	2695	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	1	-30	1	0	multi-exon	FALSE	canonical	3	379	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTGCGCTTACACA	NA	False	NA	NA	False	NA	NA	NA	98514340	98509343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511921_98514222
ES.37374.3	chrX	-	2132	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-24	0	-19	0	multi-exon	FALSE	canonical	3	92	junction_1	143.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTGCGCTTACACA	NA	False	NA	NA	False	NA	NA	NA	98514317	98509343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511189_98511728_98511921_98514222
ES.37374.4	chrX	-	2064	3	NNC	ENSMUSG00000034403.17	novel	2666	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	189	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAATAAAT	NA	False	NA	NA	False	AAAACA	-20	NA	98514295	98509373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_98511189_98511744_98511921_98514222
ES.37374.5	chrX	-	2327	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	2	337	2	9	multi-exon	FALSE	canonical	3	379	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCATTTGGATTTTTGTC	NA	False	NA	5	True	ATTAAA	-31	NA	98514339	98509710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511921_98514222
ES.37374.6	chrX	-	3874	1	NIC	ENSMUSG00000034403.17	novel	3038	3	NA	NA	689	4	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCATCATTTGGATTT	NA	False	NA	0	True	ATTAAA	-26	NA	98513589	98509715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_98509700_98513600
ES.37374.7	chrX	-	2588	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	-23	-2	20	2	multi-exon	FALSE	canonical	3	84	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGCATCATTTGGAT	NA	False	NA	-2	True	ATTAAA	-24	NA	98514321	98509717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98512207_98514222
ES.37374.8	chrX	-	1751	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113797.4	1676	3	-41	-34	-21	2	multi-exon	TRUE	canonical	1	2	junction_1	188.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGCATCATTTGGAT	NA	False	NA	-2	True	ATTAAA	-24	NA	98514319	98509717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511180_98511728_98511921_98514222
ES.37374.9	chrX	-	1754	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	-20	374	-15	2	multi-exon	FALSE	canonical	3	92	junction_1	143.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGCATCATTTGGAT	NA	False	NA	-2	True	ATTAAA	-24	NA	98514313	98509717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_98511189_98511728_98511921_98514222
ES.37375.1	chrX	+	950	2	Intergenic	novelGene_30574	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTTGGGAGACTCCAA	NA	False	NA	NA	False	ACTAAA	-10	NA	98600902	98606223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_98601074_98605444
ES.37376.1	chrX	+	4968	3	FSM	ENSMUSG00000071719.3	ENSMUST00000096363.3	3909	3	-1056	-3	-1056	3	multi-exon	FALSE	canonical	3	13	junction_2	4.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTGGTGGATTTACT	NA	False	NA	NA	False	AATAAA	-18	NA	98863570	98892399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_98865533_98888994_98889167_98889565
ES.37377.1	chrX	-	613	2	Antisense	novelGene_ENSMUSG00000071719.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTCTTTTCACCAATT	NA	False	NA	NA	False	NA	NA	NA	98864923	98824318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_98824780_98864771
ES.37378.1	chrX	-	7490	1	Intergenic	novelGene_30575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGTGGAGAAAG	NA	False	NA	NA	False	AAAAAG	-45	NA	99052236	99044746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_99044700_99052200
ES.37379.1	chrX	+	6349	7	NNC	ENSMUSG00000059327.10	novel	1877	2	NA	NA	-90377	9	intron_retention	FALSE	canonical	0	0	junction_1	9.3571125650788	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGCTCTTCCCACAT	NA	False	NA	16	True	AATAAA	-27	NA	99338371	99444377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99338571_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624
ES.37379.2	chrX	+	4577	8	NNC	ENSMUSG00000059327.10	novel	1877	2	NA	NA	-90373	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.29998902786274	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGACATTATCTTGA	NA	False	NA	3	True	AATAAA	-14	NA	99338375	99444364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99338571_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
ES.37379.3	chrX	+	4548	8	NNC	ENSMUSG00000059327.10	novel	1877	2	NA	NA	-90349	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.06889728463079	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACATTATCTTGAG	NA	False	NA	4	True	AATAAA	-15	NA	99338399	99444365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99338571_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
ES.37379.4	chrX	+	2842	8	NNC	ENSMUSG00000059327.10	novel	1877	2	NA	NA	-90341	-1704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.29998902786274	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATGGCAGAGTCCTAG	NA	False	NA	NA	False	ATTAAA	-19	NA	99338407	99442661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99338571_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
ES.37379.5	chrX	+	4386	7	ISM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	334385	1	-75152	0	3prime_fragment	FALSE	canonical	2	9	junction_6	6.54259547546351	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACATTATCTTGAG	NA	False	NA	4	True	AATAAA	-15	NA	99353596	99444365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
ES.3738.1	chr10	+	147	1	Intergenic	novelGene_2846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	646	False	NA	NA	False	NA	NA	NA	111297472	111297619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_111297500_111297600
ES.37380.1	chrX	+	2390	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	-147	-1370	-147	1370	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCATTTCTTGTGCA	NA	False	NA	9	True	AATAAA	-19	NA	99472471	99474861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99472500_99474900
ES.37380.2	chrX	+	2269	2	Genic_Genomic	ENSMUSG00000051582.3	novel	873	1	NA	NA	-105	1367	multi-exon	FALSE	canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTTGCATTTCTTGT	NA	False	NA	6	True	AATAAA	-16	NA	99472513	99474858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_99473236_99473311
ES.37380.3	chrX	+	2810	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	-105	-1832	-105	1832	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGAATTTTACTTTC	NA	False	NA	NA	False	CATAAA	-1	NA	99472513	99475323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99472500_99475300
ES.37381.1	chrX	-	3580	9	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51443	1514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	5.85234995535981	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCTGTTTATATACAT	NA	False	NA	NA	False	AATAAA	-21	NA	99537766	99444312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446547_99446745_99446946_99447736_99447912_99448134_99448340_99448564_99448636_99449191_99449303_99467905_99468055_99474860_99475030_99537500
ES.37381.2	chrX	-	3716	10	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51442	1513	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	5.07231653800592	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCCCTGTTTATATACA	NA	False	NA	NA	False	AATAAA	-20	NA	99537765	99444313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446547_99446745_99446946_99447736_99447912_99448134_99448340_99448564_99448636_99449191_99449303_99467905_99468055_99474860_99475030_99488875_99489014_99537500
ES.37381.3	chrX	-	3760	8	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51434	1511	intron_retention	FALSE	canonical	2	2	junction_6	3.11677488989592	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATCCCTGTTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	99537757	99444315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446547_99446745_99446946_99447736_99448340_99448564_99448636_99449191_99449303_99467905_99468055_99488875_99489014_99537500
ES.37381.4	chrX	-	1790	8	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51559	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.45233702322069	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAACTGGAGAGTGACA	NA	False	NA	NA	False	NA	NA	NA	99537882	99445833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446237_99446303_99446547_99446745_99446946_99447736_99447912_99448134_99448340_99448564_99448636_99449191_99449303_99537500
ES.37381.5	chrX	-	1853	11	NNC	ENSMUSG00000031220.15	novel	1984	8	NA	NA	-51434	-270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.48543526076099	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTCCAGCTGGTC	NA	False	NA	NA	False	AATAAA	-16	NA	99537757	99446101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446237_99446303_99446547_99446745_99446946_99447736_99447912_99448134_99448340_99448564_99448636_99449191_99449303_99467905_99468055_99474860_99475030_99488875_99489014_99537500
ES.37381.6	chrX	-	1834	7	NNC	ENSMUSG00000031220.15	novel	1619	7	NA	NA	-51443	-270	intron_retention	FALSE	canonical	1	2	junction_5	3.09569593683445	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTCCAGCTGGTC	NA	False	NA	NA	False	AATAAA	-16	NA	99537766	99446101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99446547_99446745_99446946_99447736_99448340_99448564_99448636_99449191_99449303_99488875_99489014_99537500
ES.37381.7	chrX	-	3461	1	Intergenic	novelGene_30576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTGCACAAAACACTT	NA	False	NA	NA	False	AATAAA	-19	NA	99537772	99534311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_99534300_99537800
ES.37381.8	chrX	-	1912	1	Intergenic	novelGene_30577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	99537784	99535872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_99535900_99537800
ES.37382.1	chrX	+	1365	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	29	124	29	-124	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGGTATCCGCTGGT	NA	False	NA	26	True	AATAAA	-29	NA	99537925	99559607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ES.37382.2	chrX	+	1129	5	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	611	126	547	-126	3prime_fragment	FALSE	canonical	3	351	junction_4	22.0496598613221	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTGGGTATCCGCTG	NA	False	NA	24	True	AATAAA	-27	NA	99538507	99559605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ES.37382.3	chrX	+	4023	1	Intergenic	novelGene_30578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAGAGAAAGGAAAA	8719	False	NA	NA	False	NA	NA	NA	99551379	99555402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_99551400_99555400
ES.37382.4	chrX	+	3761	2	Genic_Genomic	ENSMUSG00000031221.8	novel	1518	6	NA	NA	17677	-123	multi-exon	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGGTATCCGCTGGTT	NA	False	NA	27	True	AATAAA	-30	NA	99555637	99559608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_99556614_99556823
ES.37383.1	chrX	-	181	1	Intergenic	novelGene_30579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	99595192	99595011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_99595000_99595200
ES.37384.1	chrX	+	4887	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	233	-137	233	137	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTGTTTGGTGGTTTG	NA	False	NA	NA	False	AATACA	-31	NA	99669575	99770957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.10	chrX	+	4567	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	345	28	combination_of_known_junctions	FALSE	canonical	3	49	junction_25	40.8997498869654	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATAAAATTCCAACAT	NA	False	NA	46	True	NA	NA	NA	99669687	99770848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99762099_99762277_99768247_99768365_99769733_99769857_99770064
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ES.37384.29	chrX	+	3825	27	ISM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	9945	2	1722	-2	3prime_fragment	FALSE	canonical	3	204	junction_17	20.3905651694354	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAAGGAGATCCTTCT	NA	False	NA	16	True	AATAAA	-20	NA	99679287	99770818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.30	chrX	+	6724	25	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	1765	-2	intron_retention	FALSE	canonical	3	204	junction_17	20.0623593799156	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAAGGAGATCCTTCT	NA	False	NA	16	True	AATAAA	-20	NA	99679330	99770818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99769857_99770064
ES.37384.32	chrX	+	3470	24	ISM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	38998	1	30775	-1	3prime_fragment	FALSE	canonical	3	204	junction_14	21.2376061933589	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGGAGATCCTTCTA	NA	False	NA	17	True	AATAAA	-21	NA	99708340	99770819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.33	chrX	+	199	1	Intergenic	novelGene_30581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTTTTTAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	99738017	99738216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_99738000_99738200
ES.37384.34	chrX	+	3263	8	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	-218	-8	intron_retention	FALSE	canonical	3	49	junction_4	77.7628524714069	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTAGTTGAAGGAGAT	NA	False	NA	10	True	AATAAA	-14	NA	99755514	99770812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99755554_99755667_99755769_99757483_99757614_99759186_99761015_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.35	chrX	+	3545	8	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	1537	-1	intron_retention	FALSE	canonical	3	227	junction_1	20.8316870097808	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGGAGATCCTTCTA	NA	False	NA	17	True	AATAAA	-21	NA	99757269	99770819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.4	chrX	+	4708	31	NNC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	284	38566	intron_retention	FALSE	non_canonical	0	0	junction_30	48.107160474184	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTCAGCAGACCCAAT	NA	False	NA	NA	False	NA	NA	NA	99669626	99809386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064_99770810_99809366
ES.37384.5	chrX	+	4900	31	NNC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	284	-2	intron_retention	FALSE	canonical	0	0	junction_12	75.756488537653	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAAGGAGATCCTTCT	NA	False	NA	16	True	AATAAA	-20	NA	99669626	99770818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732048_99732255_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760939_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.6	chrX	+	4416	31	NNC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	287	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.107160474184	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTGAAGGAGATCCT	NA	False	NA	13	True	AATAAA	-17	NA	99669629	99770815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99669739_99670013_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.7	chrX	+	5117	30	NNC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	287	-7	intron_retention	FALSE	canonical	1	1	junction_4	48.7566941042583	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTAGTTGAAGGAGATC	NA	False	NA	11	True	AATAAA	-15	NA	99669629	99770813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681461_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.8	chrX	+	5173	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	328	-1	intron_retention	FALSE	canonical	3	204	junction_20	20.4419287000907	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGGAGATCCTTCTA	NA	False	NA	17	True	AATAAA	-21	NA	99669670	99770819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37384.9	chrX	+	4653	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	339	-9	339	9	multi-exon	FALSE	canonical	3	204	junction_20	20.3345386022518	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTTCTATGCTAGAGGA	NA	False	NA	27	True	AATAAA	-31	NA	99669681	99770829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ES.37385.1	chrX	-	7613	1	Genic_Genomic	ENSMUSG00000015668.14	novel	NA	NA	NA	NA	2968	7528	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAGATGTAAGACCT	NA	False	NA	NA	False	NA	NA	NA	99666573	99658960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_99659000_99666600
ES.37385.10	chrX	-	1496	6	NNC	ENSMUSG00000015668.14	novel	1497	6	NA	NA	14	1	intron_retention	FALSE	canonical	1	1	junction_2	225.00168888255	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACTGCTTGAATATAAA	NA	False	NA	-6	True	AATAAA	-15	NA	99669527	99666490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99667034_99667188_99667268_99667467_99667567_99668138_99668196_99668400_99668485_99668893
ES.37385.11	chrX	-	984	7	NNC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	208.783314041669	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99669516	99666491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669475
ES.37385.2	chrX	-	4584	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	573	-3531	-57	3528	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCTTTATTTTTAG	NA	False	NA	NA	False	NA	NA	NA	99669601	99662960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ES.37385.3	chrX	-	4353	4	NNC	ENSMUSG00000015668.14	novel	1497	6	NA	NA	1342	3525	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	261.626111506903	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGGTTGCTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	99668199	99662963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99667034_99667126_99667250_99667467_99667567_99668138
ES.37385.4	chrX	-	3651	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	-6	-2604	-3	2579	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTGACACACTGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	99669547	99663909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ES.37385.5	chrX	-	4270	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	-63	-2581	-63	2578	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAGTGACACACTGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	99670237	99663910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ES.37385.6	chrX	-	1383	5	NIC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	-7	4	intron_retention	FALSE	canonical	3	301	junction_4	119.69962405956	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTGAATATAAAATGCCA	NA	False	NA	0	True	AATAAA	-21	NA	99669551	99666484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ES.37385.7	chrX	-	1074	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	-6	-27	-3	2	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTTGAATATAAAATGC	NA	False	NA	-2	True	AATAAA	-19	NA	99669547	99666486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ES.37385.8	chrX	-	1699	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	-69	-4	-69	1	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGCTTGAATATAAAATG	NA	False	NA	-3	True	AATAAA	-18	NA	99670243	99666487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ES.37385.9	chrX	-	2113	3	NIC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	32	-1	intron_retention	FALSE	canonical	3	301	junction_2	122	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACTGCTTGAATATAAAA	NA	False	NA	-5	True	AATAAA	-16	NA	99669509	99666489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_99668485_99668893_99668994_99669491
ES.37386.1	chrX	-	173	1	Intergenic	novelGene_30580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTATTAGGTCAAAG	NA	False	NA	NA	False	NA	NA	NA	99693473	99693300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_99693300_99693500
ES.37387.1	chrX	+	3998	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	-304	-2	-304	0	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	99818042	99862016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.10	chrX	+	9335	11	ISM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	13294	0	-5998	0	3prime_fragment	FALSE	canonical	3	76	junction_3	11.0634533487515	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	99834184	99862014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.11	chrX	+	11437	9	NIC	ENSMUSG00000000881.13	novel	5017	19	NA	NA	-3952	0	intron_retention	FALSE	canonical	3	77	junction_4	10.3923048454133	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	99836230	99862016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99840407_99850117_99850295_99850785_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.12	chrX	+	2305	11	ISM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	19256	1068	-36	-1066	3prime_fragment	FALSE	canonical	3	76	junction_3	11.0634533487515	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTTCATTATTCCAGA	NA	False	NA	21	True	NA	NA	NA	99840146	99860946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.13	chrX	+	3169	11	NNC	ENSMUSG00000000881.13	novel	559	6	NA	NA	904	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7395198289742	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAATGGCTCAGAGGTC	NA	False	NA	NA	False	AATAAA	-13	NA	99841086	99862012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99841145_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.14	chrX	+	3197	8	ISM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	30427	4	-288	-2	3prime_fragment	FALSE	canonical	3	76	junction_1	11.3064908213768	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACAATGGCTCAGAGG	NA	False	NA	NA	False	AATAAA	-11	NA	99851317	99862010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.15	chrX	+	4214	3	NIC	ENSMUSG00000000881.13	novel	5017	19	NA	NA	4973	0	intron_retention	FALSE	canonical	3	83	junction_1	8	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	99856578	99862016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99858509_99858813_99858906_99859824
ES.37387.2	chrX	+	2918	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	-298	1072	-298	-1070	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTTTTCATTATTC	NA	False	NA	17	True	NA	NA	NA	99818048	99860942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.3	chrX	+	4849	13	ISM	ENSMUSG00000000881.13	ENSMUST00000147863.8	5017	19	6453	0	-293	0	3prime_fragment	FALSE	canonical	3	21	junction_1	26.9345915547688	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTCAGAGGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	99818053	99862016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.5	chrX	+	3469	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-148	-5	-148	3	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGAGGTCTTCTTGA	551	False	NA	NA	False	AATAAA	-20	NA	99820742	99862019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.6	chrX	+	3443	12	NNC	ENSMUSG00000000881.13	novel	3316	12	NA	NA	-125	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.9630265157423	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGCTCAGAGGTCTTC	574	False	NA	NA	False	AATAAA	-16	NA	99820765	99862015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_99820979_99840291_99840398_99850109_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858396_99858509_99858813_99858906_99859824
ES.37387.7	chrX	+	2312	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	-66	1070	-66	-1068	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTTTTCATTATTCCA	633	False	NA	19	True	NA	NA	NA	99820824	99860944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.8	chrX	+	3214	11	NIC	ENSMUSG00000000881.13	novel	3316	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.8027776438315	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAATGGCTCAGAGGTC	699	False	NA	NA	False	AATAAA	-13	NA	99820890	99862012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37387.9	chrX	+	3033	11	NIC	ENSMUSG00000000881.13	novel	3316	12	NA	NA	1	-1077	intron_retention	FALSE	canonical	3	72	junction_1	11.5516232625549	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTCAGCCTTTTC	700	False	NA	10	True	NA	NA	NA	99820891	99860935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ES.37388.1	chrX	+	200	1	Intergenic	novelGene_30582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGTTAGGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	99919013	99919213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_99919000_99919200
ES.37389.1	chrX	+	250	1	Intergenic	novelGene_30583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100042505	100042755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100042500_100042800
ES.3739.1	chr10	+	3501	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-118	-2033	-99	2	multi-exon	TRUE	canonical	3	980	junction_10	363.653962004586	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATATTTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	111308984	111334013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.101	chr10	+	7505	6	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	5035	-7	intron_retention	FALSE	canonical	3	1826	junction_2	186.254020090843	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACACTGGTGATATT	NA	False	NA	NA	False	AATAAA	-17	NA	111321512	111334004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111322608_111325888_111326031_111326237_111328020_111328702_111328843_111329157_111330155_111330655
ES.3739.102	chr10	+	6945	3	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-1721	0	intron_retention	FALSE	canonical	3	2234	junction_2	70	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111324984	111332745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111328843_111329157_111330155_111330655
ES.3739.103	chr10	+	3748	11	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	8702	6	-1526	-6	3prime_fragment	FALSE	canonical	3	980	junction_6	403.389898237425	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111325179	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.104	chr10	+	4784	6	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	-590	0	intron_retention	FALSE	canonical	3	1725	junction_5	218.390475982814	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111326115	111334011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111326999_111327947_111328020_111328702_111328843_111329157_111330155_111330655_111331237_111331900
ES.3739.105	chr10	+	3397	6	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	-439	-83	intron_retention	FALSE	canonical	3	1615	junction_1	259.79684370677	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGAGTTTTTCTGTT	NA	False	NA	10	True	AATATA	-13	NA	111326266	111332662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111330155_111330655
ES.3739.106	chr10	+	4991	6	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	-164	-6	intron_retention	FALSE	canonical	3	980	junction_3	533.101716373151	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111326541	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111326999_111327947_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.107	chr10	+	3571	2	FSM	ENSMUSG00000058799.17	ENSMUST00000219718.2	739	2	-2973	141	86	-7	multi-exon	FALSE	canonical	3	2234	junction_1	0	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAACATTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-14	NA	111326791	111330863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111330155_111330655
ES.3739.108	chr10	+	2689	8	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	11468	6	1240	-6	3prime_fragment	FALSE	canonical	3	980	junction_3	461.229545755203	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111327945	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.109	chr10	+	5137	4	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	1240	-6	intron_retention	FALSE	canonical	3	980	junction_2	626.751058147403	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111327945	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111328843_111329157_111329304_111329410_111330155_111330655
ES.3739.11	chr10	+	1534	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	635.455597446848	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCTGTCTCGGTTTGTA	NA	False	NA	25	True	AATAAA	-27	NA	111309028	111332747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.110	chr10	+	2616	7	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	12224	6	-1063	-6	3prime_fragment	FALSE	canonical	3	980	junction_2	468.022316656897	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111328701	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.111	chr10	+	567	2	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	14289	2014	1002	17	3prime_fragment	FALSE	canonical	3	1725	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATGGTTTTGTATTT	NA	False	NA	6	True	NA	NA	NA	111330766	111331997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111331237_111331900
ES.3739.112	chr10	+	1672	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	96	181	96	-181	multi-exon	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTTTCAGAAACAGAT	NA	False	NA	NA	False	NA	NA	NA	111342242	111344325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111343510_111343920
ES.3739.113	chr10	+	1808	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	146	-5	146	5	multi-exon	FALSE	canonical	3	16	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTCTTTTTCATAG	NA	False	NA	23	True	ATTAAA	-23	NA	111342292	111344511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111343510_111343920
ES.3739.12	chr10	+	3450	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-55	-2	intron_retention	FALSE	non_canonical	0	0	junction_10	580.414726241392	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGGTGATATTTGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	111309028	111334009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330025_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.15	chr10	+	3083	13	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-47	-3	intron_retention	FALSE	canonical	0	0	junction_9	676.415239619044	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309036	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111331237_111331900_111331967_111332614
ES.3739.16	chr10	+	1668	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-66	-252	-47	252	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTAGCTGTTTCTTTC	NA	False	NA	NA	False	AATACA	-28	NA	111309036	111332232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.17	chr10	+	1980	12	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-44	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	780.888400614887	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309039	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111331161_111331237_111331900
ES.3739.18	chr10	+	1427	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-60	-17	-41	17	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATGGTTTTGTATTT	NA	False	NA	6	True	NA	NA	NA	111309042	111331997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.19	chr10	+	2178	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-59	-769	-40	4	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCTCGGTTTGTACT	NA	False	NA	27	True	AATAAA	-29	NA	111309043	111332749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.2	chr10	+	2207	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-85	-1	intron_retention	FALSE	canonical	0	0	junction_8	751.21917475575	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111308998	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328704_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.20	chr10	+	1464	8	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-40	-8	intron_retention	FALSE	canonical	0	0	junction_4	723.765493648266	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCATGGGATGCTGTC	NA	False	NA	15	True	AATAAA	-17	NA	111309043	111332737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111330003_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.21	chr10	+	2162	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-40	4	intron_retention	FALSE	canonical	0	0	junction_10	580.414726241392	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCTCGGTTTGTACT	NA	False	NA	27	True	AATAAA	-29	NA	111309043	111332749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329308_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.22	chr10	+	2517	12	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	-40	-5	intron_retention	FALSE	canonical	3	980	junction_9	394.71280489377	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111309043	111330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.23	chr10	+	3939	14	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-39	0	intron_retention	FALSE	canonical	3	980	junction_10	373.110180912545	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111309044	111334011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111331237_111331900
ES.3739.25	chr10	+	3430	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_10	580.414726241392	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111309044	111334011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.26	chr10	+	3334	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-97	-1872	-39	-3	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309044	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.27	chr10	+	1428	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	-41	125	-37	60	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGTAATCATGAAAAT	NA	False	NA	76	True	ATTAAA	-15	NA	111309046	111331064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ES.3739.28	chr10	+	3432	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-37	-8	intron_retention	FALSE	non_canonical	0	0	junction_10	580.414726241392	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACACTGGTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	111309046	111334003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330008_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.29	chr10	+	1252	11	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	-26	-8	combination_of_known_splicesites	FALSE	canonical	2	24	junction_2	681.15156169534	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAACATTTTTTTTTT	NA	False	NA	-4	True	AATAAA	-13	NA	111309057	111330862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.30	chr10	+	1467	16	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-26	-8	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_15	724.687040498633	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCATGGGATGCTGTC	NA	False	NA	15	True	AATAAA	-17	NA	111309057	111332737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331903_111331933_111332614
ES.3739.31	chr10	+	2011	15	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	684	junction_14	478.642899780415	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309057	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111331237_111331900_111331967_111332614
ES.3739.32	chr10	+	2772	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-26	-1260	-26	-6	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111309057	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.33	chr10	+	3257	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-26	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	627.329702957717	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACTGGTGATATTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	111309057	111334007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326260_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.34	chr10	+	2721	8	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-25	-2	intron_retention	FALSE	canonical	0	0	junction_4	723.765493648266	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGGTGATATTTGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	111309058	111334009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111330003_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.35	chr10	+	3374	14	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-19	-8	intron_retention	FALSE	canonical	0	0	junction_1	619.440547361873	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACACTGGTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	111309064	111334003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.36	chr10	+	3228	13	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-17	0	intron_retention	FALSE	canonical	2	24	junction_2	621.966834369451	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111309066	111334011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.38	chr10	+	1599	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-8	231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	580.414726241392	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAACTGTTGAACATA	NA	False	NA	NA	False	AATACA	-7	NA	111309075	111332211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.39	chr10	+	2006	13	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-6	-6	intron_retention	FALSE	non_canonical	0	0	junction_10	593.298313573272	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCATGGGATGCTGTCTC	NA	False	NA	17	True	AATAAA	-19	NA	111309077	111332739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330651_111330686_111331185_111331237_111331900
ES.3739.4	chr10	+	3734	15	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-66	-6	intron_retention	FALSE	canonical	3	75	junction_13	593.978045358031	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111309017	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911_111331237_111331900
ES.3739.40	chr10	+	3341	12	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	1615	junction_6	222.659730018476	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309083	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111330155_111330655_111331237_111331900
ES.3739.41	chr10	+	5399	10	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	980	junction_8	388.865586603449	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309083	111332745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111328020_111328702_111328843_111329157_111329304_111329410_111330155_111330655
ES.3739.42	chr10	+	1468	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	635.455597446848	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309084	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329308_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.43	chr10	+	1299	14	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	802.511811190709	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111309085	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326274_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.44	chr10	+	1527	16	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	587.698584877203	935	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACACTGGTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	111309085	111334003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111333829
ES.3739.46	chr10	+	1962	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	627.329702957717	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309087	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326260_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.49	chr10	+	1312	14	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	802.511811190709	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCATGGGATGCTGTC	NA	False	NA	15	True	AATAAA	-17	NA	111309087	111332737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326260_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330008_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.5	chr10	+	2858	14	ISM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-63	3	-63	-3	intron_retention	FALSE	canonical	3	980	junction_10	374.169201987518	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309020	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185
ES.3739.50	chr10	+	1433	13	NNC	ENSMUSG00000058799.17	novel	1512	14	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	647.569488978253	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAACATTTTTTTTTTT	NA	False	NA	-3	True	AATAAA	-14	NA	111309087	111330863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321338_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.52	chr10	+	1235	12	NNC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	681.800036122174	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAGCAACATTTTTT	NA	False	NA	-8	True	AATAAA	-9	NA	111309094	111330858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111326260_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.53	chr10	+	2112	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-6	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	580.414726241392	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309096	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330019_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.54	chr10	+	4301	14	FSM	ENSMUSG00000058799.17	ENSMUST00000219961.2	1512	14	27	-2816	12	-6	multi-exon	FALSE	canonical	3	75	junction_13	616.19895158057	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111309114	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111330911
ES.3739.57	chr10	+	4411	13	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	19	-2	intron_retention	FALSE	canonical	3	980	junction_9	378.035161503971	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGGTGATATTTGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	111309121	111334009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111331237_111331900
ES.3739.58	chr10	+	2148	16	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_1	732.630317569661	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309126	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111311287_111311348_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.59	chr10	+	1570	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-15	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	580.414726241392	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAACATACTTGGAGTAG	NA	False	NA	NA	False	AATACA	-17	NA	111309126	111332221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330008_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.6	chr10	+	2597	14	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-63	-3	intron_retention	FALSE	canonical	3	684	junction_13	493.082791276733	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309020	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111331237_111331900_111331967_111332614
ES.3739.60	chr10	+	3344	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-14	-7	intron_retention	FALSE	non_canonical	0	0	junction_9	739.994130793932	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACACTGGTGATATT	NA	False	NA	NA	False	AATAAA	-17	NA	111309127	111334004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329156_111329304_111330017_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.62	chr10	+	3370	15	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-12	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	599.66814377042	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTGGTGATATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	111309129	111334006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321338_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.63	chr10	+	3801	12	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	980	junction_9	389.240349381686	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309130	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.64	chr10	+	2537	14	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	684	junction_13	484.441250766062	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309132	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111330155_111330655_111331237_111331900_111331967_111332614
ES.3739.65	chr10	+	2086	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	580.414726241392	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309133	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330008_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.66	chr10	+	1279	13	NNC	ENSMUSG00000058799.17	novel	1512	14	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	981.46050466752	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTGTTGGGAAATTTT	NA	False	NA	17	True	AATAAA	-18	NA	111309136	111331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326323_111326872_111326999_111327947_111328020_111328702_111328843_111329159_111329304_111330010_111330155_111330655_111330686_111330911
ES.3739.68	chr10	+	1404	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	654.995595093461	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309136	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330159_111331185_111331237_111331900_111331967_111332614
ES.3739.69	chr10	+	3331	15	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	1	19745	intron_retention	FALSE	non_canonical	0	0	junction_6	859.623223705999	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTGTAGTGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	111309142	111353756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326868_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111333994_111353740
ES.3739.7	chr10	+	1383	13	NNC	ENSMUSG00000058799.17	novel	1512	14	NA	NA	-63	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	886.633751738688	834	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTGTTGGGAAATTTT	NA	False	NA	17	True	AATAAA	-18	NA	111309020	111331005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329160_111329315_111330031_111330155_111330655_111330686_111330911
ES.3739.70	chr10	+	3320	15	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_9	586.383085063834	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGGTGATATTTGAAG	NA	False	NA	NA	False	AATAAA	-22	NA	111309142	111334009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328847_111329180_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.72	chr10	+	3726	12	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	1	-1	intron_retention	FALSE	canonical	3	980	junction_9	362.973145194285	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	False	NA	22	True	AATAAA	-24	NA	111309142	111332744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111330155_111330655_111331237_111331900
ES.3739.73	chr10	+	2071	14	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_10	580.414726241392	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGCTGTCTCGGTTTGT	NA	False	NA	24	True	AATAAA	-26	NA	111309144	111332746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330025_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.74	chr10	+	3109	12	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	3	-8	intron_retention	FALSE	non_canonical	0	0	junction_9	623.993602955131	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCATGGGATGCTGTC	NA	False	NA	15	True	AATAAA	-17	NA	111309144	111332737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111330018_111330155_111330655_111331237_111331900
ES.3739.75	chr10	+	1881	13	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	3	-3	intron_retention	FALSE	canonical	2	24	junction_2	621.966834369451	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111309144	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.76	chr10	+	1449	16	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	636.488770957945	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTCTCGGTTTGTACT	NA	False	NA	27	True	AATAAA	-29	NA	111309145	111332749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321338_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.77	chr10	+	1907	12	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	4	-5	intron_retention	FALSE	canonical	3	980	junction_9	389.240349381686	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111309145	111330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.8	chr10	+	1550	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	-61	-3	-61	3	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111309022	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.81	chr10	+	2623	14	NIC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	7	3	intron_retention	FALSE	canonical	3	980	junction_9	368.631227988787	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111309148	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.83	chr10	+	3821	12	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	10	-10	intron_retention	FALSE	canonical	3	980	junction_10	371.29069051015	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTCTCATGGGATGCTG	NA	False	NA	13	True	AATAAA	-15	NA	111309151	111332735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111330155_111330655
ES.3739.85	chr10	+	1223	14	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	19	3	combination_of_known_splicesites	FALSE	canonical	2	24	junction_2	654.115320162283	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111309160	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111309213_111317140_111317178_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.86	chr10	+	1385	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	46	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	766.180455112187	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111309187	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329299_111330003_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.87	chr10	+	3322	15	NNC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	80	-6	intron_retention	FALSE	canonical	3	8	junction_1	606.11890124709	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111309221	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309279_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.88	chr10	+	2300	15	NNC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	409	-8	intron_retention	FALSE	canonical	3	13	junction_1	605.08874791814	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCATGGGATGCTGTC	NA	False	NA	15	True	AATAAA	-17	NA	111309550	111332737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111309854_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.89	chr10	+	3911	13	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	-743	0	intron_retention	FALSE	canonical	3	980	junction_9	388.184905468172	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111315734	111332745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111331237_111331900
ES.3739.9	chr10	+	1478	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	-118	5	-60	-5	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111309023	111330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.90	chr10	+	2003	14	FSM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	662	1269	662	-3	multi-exon	FALSE	canonical	3	980	junction_9	377.08137963032	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111317139	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.91	chr10	+	1427	12	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	663	3008	663	-1	5prime_fragment	FALSE	canonical	3	980	junction_9	401.340542936991	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGTGTTGGGAAATT	NA	False	NA	15	True	AATAAA	-16	NA	111317140	111331003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.92	chr10	+	6517	10	NIC	ENSMUSG00000058799.17	novel	1365	13	NA	NA	676	-5	intron_retention	FALSE	canonical	3	980	junction_7	425.828285104526	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACATTTTTTTTTTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	111317153	111330865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ES.3739.93	chr10	+	5943	13	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	908	1265	908	1	3prime_fragment	FALSE	canonical	3	980	junction_8	383.532584085832	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGATGCTGTCTCGGTTTGT	NA	False	NA	24	True	AATAAA	-26	NA	111317385	111332746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.94	chr10	+	4794	13	NIC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	2464	-3	intron_retention	FALSE	canonical	3	684	junction_12	491.899909365039	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111318941	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.95	chr10	+	2814	14	ISM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	10785	-3	3391	3	3prime_fragment	FALSE	canonical	3	684	junction_13	485.20124538248	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGTCTCGGTTTGTAC	NA	False	NA	26	True	AATAAA	-28	NA	111319868	111332748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ES.3739.96	chr10	+	6447	7	NIC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	3874	-11	intron_retention	FALSE	canonical	3	1826	junction_2	170.047052312	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCTCTCATGGGATGCT	NA	False	NA	12	True	AATAAA	-14	NA	111320351	111332734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111322608_111325888_111326031_111326237_111326999_111327947_111328020_111328702_111328843_111329157_111330155_111330655
ES.3739.97	chr10	+	3229	12	NNC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	4872	-6	intron_retention	FALSE	canonical	0	0	junction_8	622.120580377249	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACACTGGTGATATTT	NA	False	NA	NA	False	AATAAA	-18	NA	111321349	111334005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.3739.98	chr10	+	1969	12	NNC	ENSMUSG00000058799.17	novel	3934	14	NA	NA	4872	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	654.150726938157	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGATGCTGTCTCGGT	NA	False	NA	20	True	AATAAA	-22	NA	111321349	111332742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111331161_111331237_111331900
ES.3739.99	chr10	+	2746	13	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	4882	488	4882	-488	3prime_fragment	FALSE	canonical	3	980	junction_8	383.532584085832	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTGTTTGAGGTGG	NA	False	NA	NA	False	AATAAA	-15	NA	111321359	111333523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ES.37390.1	chrX	+	176	1	Intergenic	novelGene_30584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTAAAATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	100080400	100080576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100080400_100080600
ES.37391.1	chrX	-	4703	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-21	-1432	7	1432	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAATATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	100103266	99880821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.10	chrX	-	4876	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	15	-2300	-13	2300	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTTATGTAT	NA	False	NA	NA	False	TATAAA	-42	NA	100103258	99919187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.11	chrX	-	4609	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	-12	-2006	-12	2006	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGGTCATGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	100103285	99919481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.12	chrX	-	3649	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	8	-1066	8	1066	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTTTTTAATTAATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	100103265	99920421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.13	chrX	-	2597	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	10	-16	10	16	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTGAGCCTTTACAAAA	NA	False	NA	NA	False	NA	NA	NA	100103263	99921471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.14	chrX	-	3108	20	ISM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	36	24663	8	-24663	5prime_fragment	FALSE	canonical	3	57	junction_7	8.11277847073587	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATGTGAGTAAACTTG	NA	False	NA	NA	False	NA	NA	NA	100103237	99946150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.15	chrX	-	840	7	ISM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	47	154434	19	-154434	5prime_fragment	FALSE	canonical	3	66	junction_5	7.96694560181141	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTTCATTTAACATCT	NA	False	NA	NA	False	AAAAAG	-23	NA	100103226	100075921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.2	chrX	-	3291	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	-36	-5	-8	5	multi-exon	FALSE	canonical	3	57	junction_17	8.2193472636908	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATCAGCTGATTTCTAG	NA	False	NA	0	True	AATAAA	-21	NA	100103281	99882248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.3	chrX	-	3072	28	NNC	ENSMUSG00000009670.12	novel	3250	30	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	20.2448659006692	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGATCAGCTGATTT	NA	False	NA	-4	True	AATAAA	-17	NA	100103265	99882252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998460_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.7	chrX	-	3168	29	NIC	ENSMUSG00000009670.12	novel	3250	30	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	15.8588721708264	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103259	99882253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37391.8	chrX	-	3367	32	NNC	ENSMUSG00000009670.12	novel	3250	30	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	25.6536200292188	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103257	99882253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923453_99923494_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99969920_99969986_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ES.37392.1	chrX	+	179	1	Intergenic	novelGene_30585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGTTTTGTTT	NA	False	NA	NA	False	AAAAAG	-7	NA	100111402	100111581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100111400_100111600
ES.37393.1	chrX	+	159	1	Intergenic	novelGene_30586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	100134916	100135075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100134900_100135100
ES.37394.1	chrX	+	179	1	Intergenic	novelGene_30590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAGTTCAAGGTT	NA	False	NA	NA	False	NA	NA	NA	100153954	100154133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100154000_100154100
ES.37395.1	chrX	+	178	1	Intergenic	novelGene_30591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100176776	100176954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100176800_100177000
ES.37396.1	chrX	-	3339	10	ISM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	2071	-1636	-822	1625	3prime_fragment	FALSE	canonical	3	1326	junction_4	64.7893071500819	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCATTGGTGGTCATT	NA	False	NA	NA	False	NA	NA	NA	100126887	100121190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753
ES.37396.10	chrX	-	1899	11	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	59	combination_of_known_splicesites	FALSE	canonical	2	73	junction_10	417.383816169242	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATTCAGAGAAGTGT	NA	False	NA	NA	False	TATAAA	-18	NA	100128978	100122756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100128877
ES.37396.100	chrX	-	2967	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	-735	0	-87	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129713	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.101	chrX	-	2092	10	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	53	0	intron_retention	FALSE	canonical	3	1326	junction_3	63.148463125097	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100127734	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
ES.37396.103	chrX	-	2706	11	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_6	438.013344545574	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100128975	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126101_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.104	chrX	-	2169	9	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	569	-1	intron_retention	FALSE	canonical	3	8	junction_1	481.570607491778	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100127218	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123216_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753
ES.37396.105	chrX	-	2266	10	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	73	junction_9	435.814973765272	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100128977	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100128877
ES.37396.106	chrX	-	2257	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	421.302604190291	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100128977	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126047_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.107	chrX	-	2796	10	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	1250	junction_9	88.0931045072677	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100128983	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.108	chrX	-	2059	11	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	433.790375642429	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACCAAAAAAC	NA	False	NA	NA	False	ATTAAA	-10	NA	100128973	100122828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.109	chrX	-	1913	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	527.432279934927	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	100128980	100122829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123872_100124324_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128877
ES.37396.11	chrX	-	4802	9	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-5	8	intron_retention	FALSE	canonical	2	30	junction_8	474.185551762177	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTCTTTGCTTACT	NA	False	NA	NA	False	ATTAAA	-31	NA	100129631	100122807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126471_100126753
ES.37396.110	chrX	-	2795	8	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	80	-2	intron_retention	FALSE	canonical	3	1326	junction_1	66.1229528829376	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	100127707	100122829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
ES.37396.111	chrX	-	2307	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	160	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	512.409992096173	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAAAAAAAACCAAAAAA	NA	False	NA	NA	False	ATTAAA	-9	NA	100128798	100122829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128759
ES.37396.112	chrX	-	2169	5	NNC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	97	8418	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	87.2535815883795	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTCTCTTTACCTT	NA	False	NA	NA	False	NA	NA	NA	100266058	100132973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100134056_100140728_100140843_100141119_100141834_100145973_100146042_100265867
ES.37396.113	chrX	-	1103	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	20	-9	16	9	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGTTTCTCTTATTGGT	NA	False	NA	-2	True	NA	NA	NA	100266139	100141382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.114	chrX	-	701	3	NIC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	97	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	95.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCAGCTAGTTTCT	NA	False	NA	-11	True	NA	NA	NA	100266058	100141391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100141834_100145973_100146042_100265867
ES.37396.115	chrX	-	999	6	NNC	ENSMUSG00000046032.17	novel	1114	6	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	178.333844236028	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCAGCTAGTTTCT	NA	False	NA	-11	True	NA	NA	NA	100266056	100141391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265879
ES.37396.116	chrX	-	961	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	5	148	1	-148	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCTTTAAGTGAATGA	NA	False	NA	NA	False	NA	NA	NA	100266154	100141539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.117	chrX	-	177	1	Intergenic	novelGene_30587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	100143266	100143089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100143100_100143300
ES.37396.118	chrX	-	159	2	Intergenic	novelGene_30588	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	100187206	100150854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100150892_100187084
ES.37396.119	chrX	-	177	1	Intergenic	novelGene_30589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGTTGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	100151599	100151422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100151400_100151600
ES.37396.12	chrX	-	3901	11	ISM	ENSMUSG00000031297.15	ENSMUST00000113710.8	2750	13	-4	-20	-4	8	intron_retention	FALSE	canonical	3	1326	junction_4	61.814318729563	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTCTTTGCTTACT	NA	False	NA	NA	False	ATTAAA	-31	NA	100129630	100122807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
ES.37396.120	chrX	-	565	5	NNC	ENSMUSG00000046032.17	novel	2415	4	NA	NA	97	-29168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198.383939622138	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAACAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	100266058	100170559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100170622_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.121	chrX	-	160	1	Intergenic	novelGene_30592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	100181594	100181434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100181400_100181600
ES.37396.122	chrX	-	181	1	Intergenic	novelGene_30593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	100187205	100187024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100187000_100187200
ES.37396.123	chrX	-	6002	1	Intergenic	novelGene_30594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGGAGGCTTTTGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	100229428	100223426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100223400_100229400
ES.37396.124	chrX	-	1540	1	Intergenic	novelGene_30595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	100226150	100224610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100224600_100226200
ES.37396.125	chrX	-	2631	1	Intergenic	novelGene_30596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCGTTTTATCTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	100245281	100242650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100242600_100245300
ES.37396.126	chrX	-	2405	1	Intergenic	novelGene_30597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATGTCTATATAATC	NA	False	NA	NA	False	NA	NA	NA	100246328	100243923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100243900_100246300
ES.37396.127	chrX	-	889	1	Intergenic	novelGene_30598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCTGCCTAACACATG	NA	False	NA	NA	False	AATAAA	-17	NA	100248352	100247463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100247500_100248400
ES.37396.128	chrX	-	4929	2	NNC	ENSMUSG00000046032.17	novel	2415	4	NA	NA	1153	6083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATATGACTCTAAGTTTA	NA	False	NA	NA	False	ATTAAA	-26	NA	100256992	100249481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100249924_100252505
ES.37396.129	chrX	-	4413	6	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	107	6036	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	196.447041209584	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTAGTAGATTTATTA	NA	False	NA	NA	False	NA	NA	NA	100266048	100249528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100249919_100252422_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.13	chrX	-	2105	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	-3	6	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_12	572.923418142037	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128981	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128426_100128585_100128877
ES.37396.130	chrX	-	5038	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	40	-4076	26	4076	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGTGTCTAAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	100266129	100251488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.131	chrX	-	2764	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	34	433	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTGATGCTTCATTG	NA	False	NA	NA	False	NA	NA	NA	100266121	100255131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256354_100256403_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.132	chrX	-	2801	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	41	-427	41	427	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCATTTGATGCT	NA	False	NA	NA	False	NA	NA	NA	100266114	100255137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.133	chrX	-	2733	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	20	383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGCTGATACATCCATATA	NA	False	NA	NA	False	NA	NA	NA	100266135	100255181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256361_100256405_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.134	chrX	-	2446	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	-28	-3	-14	3	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTTTTTCTCCTTAAGTG	NA	False	NA	-12	True	ATTAAA	-18	NA	100266183	100255561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.136	chrX	-	2249	4	NNC	ENSMUSG00000046032.17	novel	2415	4	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.722045022751	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266135	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256356_100256403_100257471_100258006_100258132_100265867
ES.37396.138	chrX	-	2341	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_4	223.735334714926	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266139	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256360_100256403_100257471_100258006_100258132_100259088_100259185_100265879
ES.37396.139	chrX	-	2360	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	40	junction_1	181.166187518532	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266146	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256360_100256403_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.14	chrX	-	5023	8	NIC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-4	6	intron_retention	FALSE	canonical	3	1326	junction_3	67.4261500775902	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129630	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753
ES.37396.140	chrX	-	945	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	55	2	41	-2	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266114	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.142	chrX	-	2236	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	118	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266037	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256350_100256408_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.143	chrX	-	712	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	196.230731538156	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCGTTTTTCTCCTT	NA	False	NA	-17	True	ATTAAA	-13	NA	100266099	100255566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100255735_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.144	chrX	-	2344	5	NNC	ENSMUSG00000046032.17	novel	1002	5	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	198.383939622138	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCGTTTTTCT	NA	False	NA	-21	True	ATTAAA	-9	NA	100266134	100255570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100256350_100256393_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.145	chrX	-	829	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	30	143	16	-143	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGCACAAGTGCTGAGA	NA	False	NA	NA	False	TTTAAA	-14	NA	100266139	100255707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.15	chrX	-	2807	15	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	16	6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	629.128811313303	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129610	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877_100129064_100129193_100129261_100129344
ES.37396.16	chrX	-	3253	10	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	1250	junction_9	88.3450027232601	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128877
ES.37396.18	chrX	-	2218	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	130	6	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	409.125251083797	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128828	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
ES.37396.19	chrX	-	2713	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-33	6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	636.972118141713	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129659	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128447_100128585_100128877_100129064_100129193
ES.37396.2	chrX	-	2850	13	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	30	73	intron_retention	FALSE	non_canonical	0	0	junction_12	403.878376563484	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTGTGTCTTTTTC	NA	False	NA	NA	False	TATAAA	-32	NA	100129596	100122742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877_100129261_100129345
ES.37396.20	chrX	-	4277	3	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	169	6	intron_retention	FALSE	canonical	3	43	junction_2	641.5	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128789	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100124478_100125301_100127881_100128759
ES.37396.21	chrX	-	2226	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	420.720181444128	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126551_100126753_100126913_100127476_100127881_100128877
ES.37396.22	chrX	-	4200	8	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	3	6	intron_retention	FALSE	canonical	3	44	junction_7	498.37933262092	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128975	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126575_100126753_100128566_100128877
ES.37396.23	chrX	-	3389	9	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	-15	6	intron_retention	FALSE	canonical	3	1250	junction_8	92.3566456731729	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128993	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753_100127881_100128877
ES.37396.24	chrX	-	2518	15	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	566.062108981417	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129631	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127531_100127701_100127881_100128877_100129064_100129193_100129261_100129344
ES.37396.25	chrX	-	2019	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	162	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	584.641931014189	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128796	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128426_100128566_100128759
ES.37396.26	chrX	-	2721	10	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	6	intron_retention	FALSE	canonical	1	10	junction_7	451.8937928319	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126499_100126753_100126913_100127476_100127881_100128877
ES.37396.27	chrX	-	2135	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	417.222595522913	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126799_100127476_100127881_100128877
ES.37396.28	chrX	-	2084	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	178	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	581.908563598173	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128780	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128426_100128566_100128759
ES.37396.29	chrX	-	6169	1	Genic_Genomic	ENSMUSG00000031297.15	novel	NA	NA	NA	NA	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_100122800_100129000
ES.37396.3	chrX	-	3749	10	ISM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	34	-69	1	69	intron_retention	FALSE	canonical	3	1326	junction_3	64.1989577239343	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGTGTCTTGTGTCTT	NA	False	NA	NA	False	TATAAA	-28	NA	100128977	100122746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
ES.37396.30	chrX	-	2616	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_11	515.275189301852	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129631	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127545_100127701_100127881_100128877_100129064_100129193
ES.37396.31	chrX	-	4950	5	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	-5	6	intron_retention	FALSE	canonical	3	8	junction_4	625.780312889436	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128983	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126400
ES.37396.32	chrX	-	4872	9	ISM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	-588	-6	27	6	intron_retention	FALSE	canonical	3	1326	junction_3	67.5341348874775	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129599	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753
ES.37396.33	chrX	-	2684	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_13	513.660998423839	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129626	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877_100129064_100129193_100129261_100129344
ES.37396.34	chrX	-	3029	12	NIC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	303	6	intron_retention	FALSE	canonical	3	29	junction_11	410.740673450349	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129323	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128877_100129064_100129193
ES.37396.35	chrX	-	2604	11	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	193	6	intron_retention	FALSE	canonical	3	8	junction_7	553.348895363495	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128765	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126400_100126575_100126753_100126913_100127476_100127881_100128426
ES.37396.36	chrX	-	2183	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_12	570.115357478935	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128426_100128585_100128877
ES.37396.37	chrX	-	4660	7	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	3	6	intron_retention	FALSE	canonical	3	1326	junction_2	70.0731760376251	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128975	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753
ES.37396.38	chrX	-	3652	8	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	1250	junction_7	89.3331302668014	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128877
ES.37396.39	chrX	-	4613	6	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	-3	6	intron_retention	FALSE	canonical	3	1326	junction_2	58.5641528582118	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128981	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123415_100123706_100124478_100125301_100126020_100126139_100126253_100126396_100126575_100126753
ES.37396.4	chrX	-	3502	7	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	69	intron_retention	FALSE	canonical	3	1250	junction_6	103.546151814327	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGTGTCTTGTGTCTT	NA	False	NA	NA	False	TATAAA	-28	NA	100128978	100122746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100124478_100125301_100125405_100125498_100126253_100126396_100126913_100127476_100127881_100128877
ES.37396.40	chrX	-	3354	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	33	6	intron_retention	FALSE	canonical	3	21	junction_13	641.820174265872	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129593	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128426_100128566_100128877_100129064_100129193_100129261_100129344
ES.37396.43	chrX	-	2285	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	417.885646108048	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123910_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.44	chrX	-	2368	13	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	531.591707098179	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128978	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128447_100128566_100128877
ES.37396.45	chrX	-	1911	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	421.361704418441	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128975	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127545_100128877
ES.37396.46	chrX	-	3757	11	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	80	6	intron_retention	FALSE	canonical	1	10	junction_9	550.569486985975	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129546	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126499_100126753_100127881_100128426
ES.37396.47	chrX	-	2674	15	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-11501	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	628.575600635505	873	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100141127	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128877_100129064_100129193_100129282_100133978_100134056_100140728
ES.37396.48	chrX	-	2240	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	415.101620536346	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125396_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.49	chrX	-	4691	6	ISM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	36	-6	3	6	intron_retention	FALSE	canonical	3	1326	junction_3	76.7150571921836	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128975	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796
ES.37396.5	chrX	-	2139	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	69	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_10	589.816143669647	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAAGTGTCTTGTGTCTT	NA	False	NA	NA	False	TATAAA	-28	NA	100128977	100122746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127807_100127881_100128426_100128585_100128877
ES.37396.50	chrX	-	2779	10	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	8	junction_6	447.402379172137	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125639_100125796_100126020_100126139_100126253_100126400_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.52	chrX	-	1997	13	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_11	392.230763992605	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127531_100127782_100127881_100128877
ES.37396.53	chrX	-	2156	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_7	415.943575321509	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100125927_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.54	chrX	-	2302	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	415.606954340117	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100129013	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123216_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.55	chrX	-	4549	7	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	1326	junction_3	70.3169412177622	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396
ES.37396.57	chrX	-	3516	11	NIC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	2	6	intron_retention	FALSE	canonical	3	84	junction_10	414.120079204088	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128976	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100128585_100128877
ES.37396.58	chrX	-	2981	10	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	1250	junction_9	86.0858027324992	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.59	chrX	-	5007	4	NIC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	6	intron_retention	FALSE	canonical	3	1326	junction_1	50.3873881927699	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCTGTTCTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	100128977	100122809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100124478_100125301_100125639_100125796_100126575_100126753
ES.37396.6	chrX	-	4395	11	NIC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-4	68	intron_retention	FALSE	canonical	3	29	junction_10	430.444293724519	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGAAGTGTCTTGTGTCT	NA	False	NA	NA	False	TATAAA	-27	NA	100129630	100122747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100129064_100129193
ES.37396.60	chrX	-	4849	9	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	68	5	intron_retention	FALSE	canonical	3	8	junction_6	618.833782206499	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTCCTGTTCTTTGCTT	NA	False	NA	NA	False	ATTAAA	-28	NA	100129558	100122810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126400_100126575_100126753_100129261_100129344
ES.37396.63	chrX	-	4936	10	ISM	ENSMUSG00000031297.15	ENSMUST00000113710.8	2750	13	-495	0	-495	0	intron_retention	FALSE	canonical	3	1326	junction_4	64.7893071500819	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100130121	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753
ES.37396.64	chrX	-	2368	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	524.314651871056	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128447_100128585_100128877
ES.37396.65	chrX	-	3525	9	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	1250	junction_8	89.2913069676998	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128975	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128877
ES.37396.67	chrX	-	3513	6	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1250	junction_5	107.547198940744	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100124478_100125301_100125405_100125498_100125639_100125796_100126913_100127476_100127881_100128877
ES.37396.68	chrX	-	2213	10	NIC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	450.74007729949	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129019	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123415_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.69	chrX	-	2043	13	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	599.857529381399	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128447_100128566_100128877
ES.37396.7	chrX	-	3158	9	NNC	ENSMUSG00000031297.15	novel	2717	11	NA	NA	1	67	intron_retention	FALSE	canonical	3	8	junction_5	476.122473083344	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGAAGTGTCTTGTGTC	NA	False	NA	NA	False	TATAAA	-26	NA	100128977	100122748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126400_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.70	chrX	-	2953	12	NIC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	84	junction_11	514.16699862918	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100127881_100128426_100128585_100128877
ES.37396.71	chrX	-	3094	9	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1250	junction_8	93.7109918846237	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100127881_100128877
ES.37396.72	chrX	-	2595	11	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	10	junction_8	434.333155538464	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126499_100126753_100126913_100127476_100127881_100128877
ES.37396.73	chrX	-	2145	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	576.256953440814	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128426_100128566_100128877
ES.37396.74	chrX	-	1931	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	148	junction_10	377.275903601087	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128983	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128877
ES.37396.75	chrX	-	2697	11	FSM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	8	12	8	0	multi-exon	FALSE	canonical	3	1250	junction_10	85.0282306060758	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129003	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.76	chrX	-	1952	13	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	403.878376563484	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128975	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127531_100127807_100127881_100128877
ES.37396.77	chrX	-	2315	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	513.796077955274	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128785	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128759
ES.37396.78	chrX	-	2174	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	417.86393055971	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129002	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123387_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.8	chrX	-	2741	15	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	156	61	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	624.604201205264	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCAGAGAAGTGTCT	NA	False	NA	NA	False	TATAAA	-20	NA	100129470	100122754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877_100129064_100129193_100129261_100129344
ES.37396.80	chrX	-	2228	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_10	416.658787804296	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128980	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126907_100127476_100127881_100128877
ES.37396.81	chrX	-	4137	20	Fusion	ENSMUSG00000046032.17_ENSMUSG00000031297.15	novel	2750	13	NA	NA	50	0	multi-exon	FALSE	canonical	0	0	junction_11	642.959841157066	1111	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100266105	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100132694_100132748_100133091_100133245_100133978_100134056_100140728_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ES.37396.82	chrX	-	3847	9	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1326	junction_3	66.6819643906806	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126913_100127476
ES.37396.84	chrX	-	2257	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	intron_retention	FALSE	canonical	2	43	junction_10	592.248798132076	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126253_100126396_100126575_100126753_100126913_100127476_100127531_100127782_100127881_100128426_100128585_100128877
ES.37396.86	chrX	-	2544	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-325	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	517.436901221359	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129951	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877_100129064_100129193_100129282_100129812
ES.37396.87	chrX	-	3198	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	47	0	intron_retention	FALSE	canonical	3	21	junction_13	641.166669614736	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129579	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128566_100128877_100129064_100129193_100129261_100129344
ES.37396.88	chrX	-	2568	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-160	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	517.436901221359	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129786	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877_100129064_100129193_100129282_100129623
ES.37396.89	chrX	-	2064	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_12	579.025636306373	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128426_100128566_100128877
ES.37396.9	chrX	-	2194	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	59	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	412.829282547793	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATTCAGAGAAGTGT	NA	False	NA	NA	False	TATAAA	-18	NA	100128977	100122756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126467_100126753_100126913_100127476_100127881_100128877
ES.37396.90	chrX	-	3418	10	NIC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1326	junction_4	63.6007997465053	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128988	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126913_100127476
ES.37396.91	chrX	-	2332	13	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	535.724502944896	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128978	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128465_100128566_100128877
ES.37396.92	chrX	-	1926	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	418.914200568585	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128978	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126907_100127776_100127881_100128877
ES.37396.93	chrX	-	2090	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	523.492199220416	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129025	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123910_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128877
ES.37396.94	chrX	-	1850	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_9	528.695869393784	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128978	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126499_100126753_100126913_100127782_100127881_100128877
ES.37396.96	chrX	-	2168	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	418.44969680994	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123811_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.97	chrX	-	2171	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	550.984483290089	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128782	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123216_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
ES.37396.98	chrX	-	2778	10	NIC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1250	junction_9	86.2863449992717	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128977	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ES.37396.99	chrX	-	3224	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	14	0	intron_retention	FALSE	canonical	1	10	junction_9	550.576452231719	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100129612	100122827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126499_100126753_100127881_100128877_100129064_100129193
ES.37397.1	chrX	+	157	1	Intergenic	novelGene_30599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	100283711	100283868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100283700_100283900
ES.37398.1	chrX	+	862	1	ISM	ENSMUSG00000042903.9	ENSMUST00000062000.6	3162	3	5483	1	5190	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTTTCTGGTTTCTGC	8841	False	NA	20	True	AATAAA	-27	NA	100303616	100304478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100303600_100304500
ES.37399.1	chrX	+	176	1	Intergenic	novelGene_30600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGGAAT	NA	False	NA	NA	False	NA	NA	NA	100305223	100305399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100305200_100305400
ES.374.1	chr1	+	2063	2	FSM	ENSMUSG00000041907.10	ENSMUST00000188621.2	2046	2	-25	8	-25	-8	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATGAATGTGTGAG	NA	False	NA	NA	False	AGTAAA	-7	NA	42992006	42994307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_42992394_42992631
ES.3740.1	chr10	-	2825	1	Intergenic	novelGene_2847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAGATC	NA	False	NA	NA	False	GATAAA	-14	NA	111325458	111322633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111322600_111325500
ES.37400.1	chrX	-	1536	7	NIC	ENSMUSG00000031304.19	novel	1670	8	NA	NA	27	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	12.0611866009204	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGAATGTCTGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	100311834	100307993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ES.37400.2	chrX	-	1618	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	37	15	-28	-15	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCATCAAGAATGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	100311824	100307998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ES.37400.3	chrX	-	1366	3	FSM	ENSMUSG00000031304.19	ENSMUST00000127538.2	558	3	-82	-726	15	196	multi-exon	FALSE	canonical	3	28	junction_2	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100311846	100310075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100311102_100311316_100311471_100311660
ES.37401.1	chrX	+	7029	45	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	18	12	intron_retention	TRUE	non_canonical	0	0	junction_5	25.7491374323956	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGAAGGGTCTCCTG	NA	False	NA	43	True	AATACA	-34	NA	100317653	100341083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320051_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.10	chrX	+	7136	44	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	41	-2	intron_retention	FALSE	canonical	0	0	junction_38	25.8119630491781	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100317676	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.12	chrX	+	7118	43	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	42	-2	intron_retention	FALSE	canonical	0	0	junction_21	25.7710242638894	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100317677	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.13	chrX	+	7055	45	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	42	-7	intron_retention	FALSE	canonical	0	0	junction_38	27.0041701707638	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100317677	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.14	chrX	+	7215	44	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	42	-9	intron_retention	FALSE	canonical	2	86	junction_13	18.9896217136771	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAGAAGTGTGTGAATG	NA	False	NA	22	True	AATACA	-13	NA	100317677	100341062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.15	chrX	+	6835	46	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	42	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.678212320181	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317677	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318848_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.17	chrX	+	6727	44	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	45	-18	intron_retention	FALSE	canonical	0	0	junction_14	25.6431811993503	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGTGAAACATTGAACT	NA	False	NA	28	True	AATGAA	-16	NA	100317680	100340975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.19	chrX	+	8177	42	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	65	-10	intron_retention	FALSE	non_canonical	0	0	junction_32	36.8953050348001	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGAACTGTTGGGTT	NA	False	NA	36	True	AATGAA	-24	NA	100317700	100340983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320030_100320159_100320270_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334962_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.20	chrX	+	6702	44	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	76	-7	intron_retention	FALSE	non_canonical	0	0	junction_9	31.4886640775168	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100317711	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321519_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336529_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.22	chrX	+	6863	44	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	92	-3	intron_retention	FALSE	canonical	0	0	junction_13	25.7043556504551	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317727	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.23	chrX	+	7590	44	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	92	5	intron_retention	FALSE	canonical	0	0	junction_10	35.6533851459218	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTGTATATTATTTAT	NA	False	NA	-42	True	AATGAA	-39	NA	100317727	100340998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322330_100322483_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.25	chrX	+	8289	41	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	93	-2	intron_retention	FALSE	canonical	0	0	junction_34	27.692948109582	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100317728	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.28	chrX	+	9119	37	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	94	-12	intron_retention	FALSE	canonical	2	86	junction_11	18.2397231338636	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100317729	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100329169_100329264_100329379_100329630_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.29	chrX	+	7090	45	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	94	-7	intron_retention	FALSE	canonical	0	0	junction_38	31.8426204847975	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317729	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329964_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.3	chrX	+	7972	43	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	40	-3	intron_retention	FALSE	canonical	2	58	junction_38	21.07605545112	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317675	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.30	chrX	+	10219	33	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	94	-16	intron_retention	FALSE	canonical	0	0	junction_29	33.6435677126773	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAAACATTGAACTGT	NA	False	NA	30	True	AATGAA	-18	NA	100317729	100340977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321559_100321669_100322166_100322950_100323078_100324161_100325707_100326006_100326126_100326305_100327052_100327273_100327980_100328149_100329169_100329264_100329379_100329630_100330154_100331166_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337401_100337477_100337563_100337782_100339460_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.31	chrX	+	7421	43	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	97	-7	intron_retention	FALSE	canonical	0	0	junction_37	25.960647438373	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100317732	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.32	chrX	+	6957	47	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	98	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	35.1658573566676	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTCTCCTGTGAGAGT	NA	False	NA	50	True	AATACA	-41	NA	100317733	100341090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332530_100332612_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.34	chrX	+	6875	46	NNC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	98	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	31.6529794981627	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317733	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325346_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328604_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.35	chrX	+	8629	39	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-95	-7	intron_retention	FALSE	non_canonical	0	0	junction_30	32.2246700973165	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317739	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100325489_100325655_100325707_100326006_100326126_100326305_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334962_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.36	chrX	+	6846	45	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-95	-2	intron_retention	FALSE	canonical	0	0	junction_39	25.5291924945049	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100317739	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.37	chrX	+	8103	40	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-80	-3	intron_retention	FALSE	canonical	0	0	junction_34	26.3027685700768	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTGGGTTTTGTATA	NA	False	NA	43	True	AATGAA	-31	NA	100317754	100340990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.4	chrX	+	7050	45	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	40	60	intron_retention	FALSE	canonical	0	0	junction_39	25.5291924945049	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTCATGCCTTCT	NA	False	NA	91	True	NA	NA	NA	100317675	100341131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.41	chrX	+	7265	44	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	-15	-10	intron_retention	FALSE	canonical	2	58	junction_39	20.9198165296543	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGAACTGTTGGGTT	NA	False	NA	36	True	AATGAA	-24	NA	100317819	100340983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.45	chrX	+	6827	46	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	-5	-12	intron_retention	FALSE	canonical	0	0	junction_31	34.6702277373256	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100317829	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332530_100332612_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.46	chrX	+	7890	40	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	5	-3	intron_retention	FALSE	canonical	2	89	junction_34	18.6827558163007	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317839	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.48	chrX	+	6691	44	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	7	-4	intron_retention	FALSE	canonical	0	0	junction_16	31.1108731008091	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTTGGGTTTTGTAT	NA	False	NA	42	True	AATGAA	-30	NA	100317841	100340989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.49	chrX	+	9008	35	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	7	-7	intron_retention	FALSE	canonical	2	89	junction_29	18.7206748761915	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100317841	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100326450_100326887_100327052_100327273_100327980_100328149_100328589_100329066_100329169_100329264_100329379_100329630_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.50	chrX	+	6561	46	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	31.6800673399958	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100317841	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336839_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.51	chrX	+	6805	45	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	11	-7	intron_retention	FALSE	canonical	0	0	junction_39	30.3440669109171	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100317845	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340800
ES.37401.53	chrX	+	8260	40	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	13	-12	intron_retention	FALSE	canonical	2	8	junction_34	25.7909463292359	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100317847	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337401_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.56	chrX	+	7495	43	NNC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_23	31.7437300752916	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100317860	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329633_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337401_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.57	chrX	+	6808	44	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	723	-7	intron_retention	FALSE	canonical	2	58	junction_39	20.856433200358	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100318588	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.58	chrX	+	6197	43	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	1232	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_26	32.7223598548014	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTTGTATATTATTTA	NA	False	NA	-43	True	AATGAA	-38	NA	100319097	100340997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331711_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.59	chrX	+	6274	39	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	2225	-12	intron_retention	FALSE	canonical	0	0	junction_33	26.9854788077217	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100320090	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.6	chrX	+	6921	46	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	40	-3	combination_of_known_junctions	FALSE	canonical	2	58	junction_41	20.6676941202185	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317675	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.60	chrX	+	5912	40	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	2252	-12	intron_retention	FALSE	canonical	0	0	junction_13	27.1955685371806	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100320117	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326128_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.61	chrX	+	6736	37	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	2899	-7	intron_retention	FALSE	canonical	0	0	junction_21	39.3667760371046	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100320764	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332530_100332612_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.62	chrX	+	5360	36	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	3801	-13	intron_retention	FALSE	canonical	0	0	junction_30	27.6956638468618	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAACATTGAACTGTTGG	NA	False	NA	33	True	AATGAA	-21	NA	100321666	100340980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.63	chrX	+	5688	35	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	3912	-7	intron_retention	FALSE	canonical	2	86	junction_5	19.342590652464	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100321777	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.64	chrX	+	5040	35	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	4204	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	35.5192452341955	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATGGAAGGGTCTCCT	NA	False	NA	42	True	AATACA	-33	NA	100322069	100341082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.65	chrX	+	7047	27	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-3353	5	intron_retention	FALSE	canonical	2	86	junction_2	20.4671767824433	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTTGTATATTATTTAT	NA	False	NA	-42	True	AATGAA	-39	NA	100322948	100340998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100323078_100324161_100324855_100324968_100325489_100325655_100325707_100326006_100326450_100326887_100327052_100327273_100327980_100328149_100329169_100329264_100329379_100329630_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.66	chrX	+	4743	32	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-2002	-12	intron_retention	FALSE	canonical	0	0	junction_20	29.3067312288044	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACATTGAACTGTTGGG	NA	False	NA	34	True	AATGAA	-22	NA	100324299	100340981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.67	chrX	+	5342	31	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-1949	0	intron_retention	FALSE	canonical	2	86	junction_2	20.0135787237898	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTGTATATTA	NA	False	NA	46	True	AATGAA	-34	NA	100324352	100340993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100324392_100324773_100324855_100324968_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.69	chrX	+	4587	26	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	-283	-7	intron_retention	FALSE	canonical	3	89	junction_21	17.6876906350151	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAACTGTTGGGTTTTG	NA	False	NA	39	True	AATGAA	-27	NA	100326018	100340986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336893_100337030_100337237_100337398_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.7	chrX	+	6911	46	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	41	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_39	26.7088000479243	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317676	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.72	chrX	+	3873	25	NNC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	842	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	34.1345123087405	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100327633	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329964_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.73	chrX	+	3644	25	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	1070	-7	intron_retention	FALSE	non_canonical	0	0	junction_15	39.7813468293314	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	False	NA	24	True	AATACA	-15	NA	100327861	100341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334870_100334923_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.75	chrX	+	3379	24	NNC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	-1364	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	46.749503398998	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100328265	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329964_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337716_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.77	chrX	+	3027	19	NNC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	0	-9	intron_retention	FALSE	non_canonical	0	0	junction_11	35.2999930052803	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTGAACTGTTGGGTTT	NA	False	NA	37	True	AATGAA	-25	NA	100329629	100340984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336527_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.78	chrX	+	3103	19	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_13	34.5691738081456	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100329629	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.79	chrX	+	3361	16	NNC	ENSMUSG00000079487.12	novel	3273	18	NA	NA	214	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	48.3678497443177	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGGGTTTTGTATAT	NA	False	NA	44	True	AATGAA	-32	NA	100329843	100340991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100330154_100331166_100331239_100331654_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334964_100336149_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37401.8	chrX	+	7484	44	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	41	-3	intron_retention	FALSE	canonical	0	0	junction_37	27.1908703222327	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGTGAATGTACACA	NA	False	NA	28	True	AATACA	-19	NA	100317676	100341068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ES.37402.1	chrX	-	5726	39	Antisense	novelGene_ENSMUSG00000079487.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCGGAGGCGGGGCAC	NA	False	NA	NA	False	NA	NA	NA	100337055	100317728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100317964_100318499_100318605_100318775_100318968_100319095_100319255_100319699_100319886_100320045_100320158_100320268_100320524_100321037_100321185_100321456_100321553_100321664_100321805_100322031_100322161_100322943_100323078_100324161_100324390_100324771_100324855_100324968_100325143_100325345_100325486_100325653_100325705_100326004_100326121_100326300_100326448_100326885_100327051_100327272_100327398_100327743_100327977_100328146_100328301_100328473_100328588_100329065_100329169_100329264_100329375_100329625_100329805_100329971_100330151_100331163_100331239_100331654_100331787_100331953_100332116_100332734_100332847_100333009_100333099_100333620_100333732_100333928_100334061_100334794_100334961_100336147_100336526_100336739_100336890_100337027
ES.37403.1	chrX	+	134	1	Intergenic	novelGene_30601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	100375534	100375668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100375500_100375700
ES.37404.1	chrX	+	1606	2	NNC	ENSMUSG00000047797.15	novel	1513	2	NA	NA	-1525	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTTTGAGTGTTGAAG	NA	False	NA	NA	False	ATTAAA	-23	NA	100425816	100429236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100425944_100427757
ES.37404.2	chrX	+	1556	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	25	4	25	-4	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGGTGTTTTGAGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100427366	100429231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100427449_100427757
ES.37405.1	chrX	-	224	1	Intergenic	novelGene_30602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAACCAAGCT	NA	False	NA	NA	False	NA	NA	NA	100436400	100436176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100436200_100436400
ES.37406.1	chrX	-	5539	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	54	junction_18	23.4366388730694	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463488	100447988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.10	chrX	-	5839	24	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	54	junction_18	21.855860517065	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463436	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.11	chrX	-	4869	25	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	28.6471590602318	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463803	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463764
ES.37406.14	chrX	-	5662	24	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	37	-1	intron_retention	FALSE	canonical	3	30	junction_23	24.8715414234588	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463785	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463764
ES.37406.15	chrX	-	4602	16	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-516	-1	intron_retention	FALSE	canonical	3	8	junction_2	22.974962217355	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100459288	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027
ES.37406.16	chrX	-	5403	25	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	2	22	junction_24	26.5045855571363	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463984	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463933
ES.37406.17	chrX	-	4032	19	NNC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-228	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.097602462578	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100459000	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452120_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793
ES.37406.18	chrX	-	4918	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	52	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	31.7515310217039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100464239	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100462400_100462559_100464145
ES.37406.19	chrX	-	5400	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_24	25.8725508771147	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463818	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463764
ES.37406.2	chrX	-	5386	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	30.7053368054046	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463823	100447988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463764
ES.37406.20	chrX	-	5213	24	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	29.9576891297747	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463419	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.21	chrX	-	4823	24	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_23	27.3884056437227	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463454	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100463303
ES.37406.23	chrX	-	4977	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	27.4347394840111	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463450	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463303
ES.37406.24	chrX	-	4937	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	32.1800490297258	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463437	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100462400_100462559_100463303
ES.37406.25	chrX	-	5465	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	29.1317648319188	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463437	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.26	chrX	-	5398	25	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	1	13	junction_24	27.7350748151145	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCTTTCTCTGGGGG	NA	False	NA	-3	True	AATAAA	-13	NA	100463803	100447990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463751
ES.37406.28	chrX	-	4908	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_23	27.635241942531	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCTTTCTCTGGGG	NA	False	NA	-4	True	AATAAA	-12	NA	100463388	100447991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100462400_100462559_100463303
ES.37406.29	chrX	-	5724	24	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	45	-3	intron_retention	FALSE	canonical	1	13	junction_23	26.1330028398788	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463777	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463751
ES.37406.3	chrX	-	5498	25	FSM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	67	-1	-6	1	multi-exon	FALSE	canonical	3	54	junction_18	23.7530334320108	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463453	100447988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.30	chrX	-	5518	25	NNC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	136	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	29.1704759417234	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463268	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463100
ES.37406.31	chrX	-	5452	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	29.3484809374069	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463432	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.32	chrX	-	4335	18	NNC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-603	-3	intron_retention	FALSE	canonical	0	0	junction_1	31.1789122240345	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100459375	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100449410_100449502_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458353_100458505_100458793
ES.37406.33	chrX	-	6099	23	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	0	-3	intron_retention	FALSE	canonical	3	73	junction_5	20.8604176562548	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463415	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.34	chrX	-	5368	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	13	-3	combination_of_known_junctions	FALSE	canonical	2	22	junction_24	26.7114207783862	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463957	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463933
ES.37406.35	chrX	-	5340	25	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	20	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_5	31.3866733485549	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463950	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463933
ES.37406.36	chrX	-	5162	24	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	1	8	junction_2	32.9128424553048	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463824	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463751
ES.37406.37	chrX	-	5375	25	FSM	ENSMUSG00000031310.17	ENSMUST00000063577.10	6057	25	679	3	46	-3	multi-exon	FALSE	canonical	1	13	junction_24	27.5416036307902	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463776	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463751
ES.37406.38	chrX	-	5190	24	FSM	ENSMUSG00000031310.17	ENSMUST00000117901.8	5178	24	-15	3	-4	-3	multi-exon	FALSE	canonical	3	8	junction_2	34.4771368861147	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGCTTTCTCTGGG	NA	False	NA	-5	True	AATAAA	-11	NA	100463419	100447992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.39	chrX	-	4714	24	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	28.7073757342968	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTGCTTTCTCTGG	NA	False	NA	-6	True	AATAAA	-10	NA	100463809	100447993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100463764
ES.37406.4	chrX	-	4913	23	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	31.2464543443078	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTCTCTGGGGGAG	NA	False	NA	-1	True	AATAAA	-15	NA	100463418	100447988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.40	chrX	-	4504	21	NNC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	920	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	33.8184860690126	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTGCTTTCTCTGG	NA	False	NA	-6	True	AATAAA	-10	NA	100460059	100447993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458125_100458353_100458505_100458793_100459013_100459366_100459545_100459772
ES.37406.42	chrX	-	7035	22	NNC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	16	-8	intron_retention	FALSE	canonical	0	0	junction_17	28.2498570220932	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTTCTTTGCTTTCT	NA	False	NA	-10	True	AATAAA	-6	NA	100463388	100447997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100459177_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100462559_100463303
ES.37406.43	chrX	-	5371	25	NIC	ENSMUSG00000031310.17	novel	6057	25	NA	NA	120	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	29.1704759417234	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTTCTTTGCTTTCT	NA	False	NA	-10	True	AATAAA	-6	NA	100464171	100447997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100464145
ES.37406.44	chrX	-	1897	7	ISM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	63	10544	9	1	5prime_fragment	FALSE	canonical	3	74	junction_4	23.7065391822594	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCTCTCCTTCCCCA	NA	False	NA	1	True	NA	NA	NA	100463457	100458533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.45	chrX	-	1918	5	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	631	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	60.4255740560237	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	-1	True	NA	NA	NA	100462773	100458535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100461878
ES.37406.46	chrX	-	2813	6	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-1	0	intron_retention	FALSE	canonical	3	74	junction_4	25.9275914808916	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	False	NA	-4	True	NA	NA	NA	100463436	100458538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100462559_100463303
ES.37406.47	chrX	-	1814	7	NIC	ENSMUSG00000031310.17	novel	1750	7	NA	NA	-36	2	combination_of_known_junctions	FALSE	canonical	2	22	junction_6	43.5867589475927	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100464006	100458541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463933
ES.37406.48	chrX	-	1140	6	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	51.8867998627782	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100463388	100458541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100463303
ES.37406.49	chrX	-	1561	6	FSM	ENSMUSG00000031310.17	ENSMUST00000117637.8	1593	6	29	3	-3	2	multi-exon	FALSE	canonical	3	17	junction_2	47.004680617998	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100463418	100458541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.5	chrX	-	5243	11	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	1787	0	intron_retention	FALSE	canonical	3	73	junction_3	12.5602547744861	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100456738	100447989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717
ES.37406.51	chrX	-	1828	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	25	6	14	2	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCCTCAGCCTCTC	NA	False	NA	-7	True	NA	NA	NA	100463390	100458541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ES.37406.52	chrX	-	1335	7	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	45.7711699653832	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCCAGCCTCAGCCTCT	NA	False	NA	-8	True	NA	NA	NA	100463420	100458542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463303
ES.37406.53	chrX	-	1761	7	ISM	ENSMUSG00000031310.17	ENSMUST00000120107.8	5882	25	543	10554	43	0	5prime_fragment	FALSE	canonical	1	13	junction_6	47.5733352017937	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCCAGCCTCAGCCTC	NA	False	NA	-9	True	NA	NA	NA	100463779	100458543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463751
ES.37406.54	chrX	-	1217	6	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	51.0160758977011	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCCAGCCTCAGCCTC	NA	False	NA	-9	True	NA	NA	NA	100463461	100458543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100463303
ES.37406.55	chrX	-	1496	6	FSM	ENSMUSG00000031310.17	ENSMUST00000118092.8	1502	6	5	1	5	-1	multi-exon	FALSE	canonical	3	17	junction_2	50.7014792683606	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACCCAGCCTCAGCCT	NA	False	NA	-10	True	NA	NA	NA	100463817	100458544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100461878_100462559_100463764
ES.37406.56	chrX	-	3908	3	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	10	-1	intron_retention	FALSE	canonical	3	135	junction_2	3	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACCCAGCCTCAGCCT	NA	False	NA	-10	True	NA	NA	NA	100463425	100458544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459545_100459772_100462559_100463303
ES.37406.57	chrX	-	1301	5	NNC	ENSMUSG00000031310.17	novel	1593	6	NA	NA	863	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.2237300380475	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTTATGTTTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	100462541	100458670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100459013_100459366_100459545_100460514_100460589_100460892_100460937_100461878
ES.37406.58	chrX	-	1773	7	NIC	ENSMUSG00000031310.17	novel	1859	7	NA	NA	41	-54	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	40.9528862095077	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATCTGTTATGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	100463929	100458674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463764
ES.37406.59	chrX	-	1986	6	NIC	ENSMUSG00000031310.17	novel	1750	7	NA	NA	1	-81	intron_retention	FALSE	canonical	3	30	junction_5	42.9911618824149	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAACAAATAAAGG	NA	False	NA	NA	False	AATAAA	-26	NA	100463821	100458701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463764
ES.37406.6	chrX	-	5201	24	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	34.6204917629066	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100463433	100447989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37406.7	chrX	-	5211	24	NIC	ENSMUSG00000031310.17	novel	5564	25	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	30.1633235396321	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100463422	100447989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ES.37407.1	chrX	+	2654	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	-90	-2	-90	2	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGCTGTTTTTTTTTC	NA	False	NA	22	True	ATTAAA	-23	NA	100473070	100492199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.10	chrX	+	3847	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-73	0	intron_retention	FALSE	canonical	3	146	junction_9	1094.6970768208	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473267	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724
ES.37407.100	chrX	+	7242	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5127	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	79.8639251314141	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCGAGAGTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100571212	100644634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582798_100584358_100584608_100586069_100586289_100586656_100586876_100587553_100587764_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.102	chrX	+	5972	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5122	-7	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_15	77.4016480550027	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571217	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100596086_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.104	chrX	+	7279	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5121	-5	intron_retention	FALSE	canonical	3	40	junction_1	61.923395620781	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571218	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571348_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.105	chrX	+	5226	33	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5118	-12061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.3443419108277	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATCCTTTCTTTTGAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	100571221	100622408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977
ES.37407.109	chrX	+	7551	38	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5113	-4	intron_retention	FALSE	canonical	3	140	junction_1	53.9037369400243	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCGAGAGTGATTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	100571226	100644636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.11	chrX	+	3232	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-66	-1	intron_retention	FALSE	canonical	3	3075	junction_4	308.572600857562	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473274	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.110	chrX	+	7226	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5113	-7	intron_retention	FALSE	non_canonical	0	0	junction_2	69.5091018173668	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571226	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577088_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.111	chrX	+	7210	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5113	-5	intron_retention	FALSE	canonical	2	11	junction_17	68.5161939731411	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571226	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596432_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.112	chrX	+	6510	36	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5113	-7	intron_retention	FALSE	non_canonical	0	0	junction_24	70.0092938436733	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571226	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605720_100612107_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.114	chrX	+	3780	17	NNC	ENSMUSG00000031314.19	novel	648	6	NA	NA	-5113	-5	intron_retention	FALSE	canonical	0	0	junction_1	82.8650776488504	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571226	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.115	chrX	+	7108	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5113	-5	intron_retention	FALSE	canonical	0	0	junction_2	85.3992902848931	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571226	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577147_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587764_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.116	chrX	+	7254	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5113	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	79.5467945348876	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571226	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577088_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.118	chrX	+	6032	40	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5113	-7	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_39	69.217586589162	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571226	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.120	chrX	+	6121	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5110	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	78.3352931057043	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571229	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600402_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.121	chrX	+	6959	38	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5101	-5	intron_retention	FALSE	canonical	0	0	junction_5	79.8779931588694	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571238	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605682_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.122	chrX	+	7277	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	145	junction_4	48.5611826331382	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4081	False	NA	NA	False	AATAAA	-19	NA	100576330	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.123	chrX	+	7191	38	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	3	junction_3	66.6990668771238	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4087	False	NA	NA	False	AATAAA	-17	NA	100576336	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582751_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.124	chrX	+	6087	39	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-3	-7	combination_of_known_junctions	FALSE	canonical	3	37	junction_38	66.613637727585	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4087	False	NA	NA	False	AATAAA	-17	NA	100576336	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.125	chrX	+	6141	39	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	37	junction_38	62.2286742164482	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4098	False	NA	NA	False	AATAAA	-19	NA	100576347	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.127	chrX	+	6412	39	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-9	274	combination_of_known_junctions	FALSE	canonical	3	37	junction_38	62.2286742164482	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTTCATCTCCCT	4106	False	NA	NA	False	NA	NA	NA	100576355	100644914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.128	chrX	+	7338	36	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-9	-11	intron_retention	FALSE	canonical	0	0	junction_4	64.6902446671988	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATAGAATCGAGAGTG	4106	False	NA	NA	False	AATAAA	-13	NA	100576355	100644629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.129	chrX	+	7185	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	20	5	-5	-5	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4110	False	NA	NA	False	AATAAA	-19	NA	100576359	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.13	chrX	+	6210	8	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-62	0	intron_retention	FALSE	canonical	3	3075	junction_4	347.641793124087	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473278	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487968_100488293_100488941_100489724
ES.37407.131	chrX	+	7454	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	30	-274	5	274	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTTCATCTCCCT	4120	False	NA	NA	False	NA	NA	NA	100576369	100644914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.132	chrX	+	7217	38	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	5	-5	intron_retention	FALSE	non_canonical	0	0	junction_12	66.9569380712724	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	4120	False	NA	NA	False	AATAAA	-19	NA	100576369	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592122_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.134	chrX	+	7560	37	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	11	-11	intron_retention	FALSE	canonical	3	145	junction_4	49.1960991628351	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATAGAATCGAGAGTG	4126	False	NA	NA	False	AATAAA	-13	NA	100576375	100644629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.135	chrX	+	9786	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	96	-2672	71	1917	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTGTGTTCCAAAGTG	4186	False	NA	NA	False	NA	NA	NA	100576435	100647312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.136	chrX	+	7150	38	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	72	-11	intron_retention	FALSE	canonical	0	0	junction_4	63.3133706829099	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATAGAATCGAGAGTG	4187	False	NA	NA	False	AATAAA	-13	NA	100576436	100644629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584380_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.137	chrX	+	7157	38	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	72	-7	intron_retention	FALSE	canonical	0	0	junction_31	66.9967237514332	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4187	False	NA	NA	False	AATAAA	-17	NA	100576436	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621989_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.138	chrX	+	9232	36	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	73	-8	intron_retention	FALSE	canonical	3	183	junction_11	42.9749238700042	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGAATCGAGAGTGATT	4188	False	NA	NA	False	AATAAA	-16	NA	100576437	100644632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100577216_100577350_100577468_100582673_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.139	chrX	+	6954	37	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	73	-7	intron_retention	FALSE	canonical	0	0	junction_22	67.1832072272032	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	4188	False	NA	NA	False	AATAAA	-17	NA	100576437	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.14	chrX	+	3551	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-58	-1	intron_retention	FALSE	canonical	3	3075	junction_4	295.922979844418	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473282	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.140	chrX	+	6034	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	77	163	combination_of_known_junctions	FALSE	canonical	3	145	junction_4	48.5611826331382	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGTTGTTCATATATT	4192	False	NA	NA	False	AATATA	-13	NA	100576441	100643503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.143	chrX	+	7047	38	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	91	-13	intron_retention	FALSE	non_canonical	0	0	junction_3	71.2124672073368	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCAATAGAATCGAGAG	4206	False	NA	NA	False	AATAAA	-11	NA	100576455	100644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100576608_100577100_100577216_100577350_100577434_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.144	chrX	+	6900	38	NIC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	103	218	intron_retention	FALSE	canonical	3	145	junction_4	48.5611826331382	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCTAGAAGTCAAAAATT	4218	False	NA	NA	False	AATAAA	-16	NA	100576467	100644395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.145	chrX	+	8184	34	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	6462	-6	intron_retention	FALSE	non_canonical	0	0	junction_9	80.166665234847	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCGAGAGTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100582826	100644634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592849_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606590_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.146	chrX	+	8476	33	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	6507	-5	intron_retention	FALSE	canonical	3	183	junction_9	44.6546535753834	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100582871	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.147	chrX	+	6504	32	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	9703	-8	intron_retention	FALSE	canonical	3	183	junction_7	44.3584162780078	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGAATCGAGAGTGATT	617	False	NA	NA	False	AATAAA	-16	NA	100586067	100644632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.148	chrX	+	6688	33	ISM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	9728	-275	9703	275	3prime_fragment	FALSE	canonical	3	183	junction_8	43.7328091225569	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCTTCATCTCCCTC	617	False	NA	NA	False	NA	NA	NA	100586067	100644915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.149	chrX	+	5454	26	ISM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	16339	-274	-7237	274	3prime_fragment	FALSE	canonical	3	183	junction_1	41.4467562060048	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTTCATCTCCCT	7228	False	NA	NA	False	NA	NA	NA	100592678	100644914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.150	chrX	+	5150	24	NIC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-6529	-7	intron_retention	FALSE	canonical	3	222	junction_1	33.9977203728162	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	7936	False	NA	NA	False	AATAAA	-17	NA	100593386	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.151	chrX	+	2950	19	NIC	ENSMUSG00000031314.19	novel	4556	20	NA	NA	863	-7	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	71.071864169608	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100600778	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.152	chrX	+	4001	18	NNC	ENSMUSG00000031314.19	novel	4556	20	NA	NA	902	-5	intron_retention	FALSE	canonical	0	0	junction_15	80.7867456325367	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100600817	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638936_100639063_100639693_100639872_100642914
ES.37407.154	chrX	+	4132	10	ISM	ENSMUSG00000031314.19	ENSMUST00000129487.8	4556	20	17679	5	-4240	-5	3prime_fragment	FALSE	canonical	3	294	junction_3	26.9654557252262	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100617594	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.155	chrX	+	8061	3	NIC	ENSMUSG00000031314.19	novel	4556	20	NA	NA	-3939	-7306	intron_retention	FALSE	canonical	3	294	junction_2	8	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGATTCTCTAAGCTC	NA	False	NA	NA	False	NA	NA	NA	100617895	100627163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100619059_100620186_100621899_100621977
ES.37407.156	chrX	+	11034	4	NIC	ENSMUSG00000031314.19	novel	4556	20	NA	NA	-2873	-5	intron_retention	FALSE	canonical	3	335	junction_3	4.98887651569859	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	5164	False	NA	NA	False	AATAAA	-19	NA	100631279	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100633622_100634078_100637672_100638905_100639063_100639693
ES.37407.157	chrX	+	4101	6	ISM	ENSMUSG00000031314.19	ENSMUST00000129487.8	4556	20	31904	5	-2333	-5	3prime_fragment	FALSE	canonical	3	335	junction_4	15.2970585407784	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	5704	False	NA	NA	False	AATAAA	-19	NA	100631819	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.158	chrX	+	5709	6	NNC	ENSMUSG00000031314.19	novel	648	6	NA	NA	-1062	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	140.711619989253	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	6975	False	NA	NA	False	AATAAA	-17	NA	100633090	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100633239_100633400_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693
ES.37407.159	chrX	+	1841	3	NNC	ENSMUSG00000031314.19	novel	648	6	NA	NA	5685	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCGAGAGTGATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100639837	100644634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100641078_100642914_100642980_100644098
ES.37407.160	chrX	+	3354	2	ISM	ENSMUSG00000031314.19	ENSMUST00000140470.2	648	6	6008	-456	6008	-7	3prime_fragment	FALSE	canonical	3	37	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100640160	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100642980_100644098
ES.37407.161	chrX	+	4128	1	Genic_Genomic	ENSMUSG00000031314.19	novel	NA	NA	NA	NA	8410	1295	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCTTTATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	100642562	100646690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_100642600_100646700
ES.37407.17	chrX	+	3203	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-4	intron_retention	FALSE	canonical	3	3075	junction_4	324.492005646356	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100473288	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.18	chrX	+	2393	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	1134.28285713926	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473288	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100489724_100489835_100491199
ES.37407.19	chrX	+	1881	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	25	intron_retention	FALSE	canonical	0	0	junction_3	1179.57947099594	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTGCATTGTCTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	100473288	100491334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.2	chrX	+	2654	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473094	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
ES.37407.20	chrX	+	4543	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	0	intron_retention	FALSE	canonical	3	3075	junction_3	283.438600052992	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473288	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.21	chrX	+	5412	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-3	intron_retention	FALSE	canonical	3	3075	junction_4	327.058074927069	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473288	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724
ES.37407.22	chrX	+	2372	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-2	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	1083.29227819642	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTGTGCTGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	100473288	100492195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.23	chrX	+	4832	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-3	intron_retention	FALSE	canonical	3	3075	junction_4	326.098120778087	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473288	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.24	chrX	+	1600	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	27	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1051.63693731909	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGCATTGTCTAGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100473288	100491336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
ES.37407.26	chrX	+	3182	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	20	intron_retention	FALSE	canonical	3	3075	junction_4	308.936527101892	2156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGATAAAGTTGCATTGT	NA	False	NA	NA	False	AATAAA	-11	NA	100473288	100491329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.27	chrX	+	5887	7	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	-1	intron_retention	FALSE	canonical	3	3075	junction_4	369.98858841261	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473288	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487968_100488293_100489835_100491199
ES.37407.28	chrX	+	4502	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-51	-4	intron_retention	FALSE	canonical	3	3075	junction_4	339.32571004862	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100473289	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487968_100488293_100489835_100491199
ES.37407.29	chrX	+	3461	10	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-51	23	intron_retention	FALSE	canonical	0	0	junction_6	1198.96381189018	2156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGTTGCATTGTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	100473289	100491332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487968_100488297_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.3	chrX	+	1732	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	-25	855	-25	33	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTCTAGTTTCCTGCA	NA	False	NA	NA	False	AATAAA	-24	NA	100473135	100491342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.34	chrX	+	2418	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-51	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1344.87568628861	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100473289	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483100_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.35	chrX	+	3814	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-51	0	intron_retention	FALSE	canonical	3	3075	junction_4	308.634987575219	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473289	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.36	chrX	+	2387	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-50	25	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1092.87700532143	2157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTGCATTGTCTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	100473290	100491334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486242_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.4	chrX	+	4625	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-83	-6	intron_retention	FALSE	canonical	3	3075	junction_4	325.801295846103	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCTGTGCTGTT	NA	False	NA	14	True	ATTAAA	-15	NA	100473257	100492191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.40	chrX	+	3145	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-49	115	intron_retention	FALSE	canonical	3	3075	junction_4	323.408238746153	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGATCATTCCTTCTC	NA	False	NA	NA	False	AATGAA	-15	NA	100473291	100491623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100489835_100491199
ES.37407.42	chrX	+	2416	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1092.09430313602	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCTGTGCTGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	100473292	100492195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486620_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.45	chrX	+	5098	8	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-48	-1	intron_retention	FALSE	canonical	3	3075	junction_4	344.074268205015	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473292	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487098_100487882_100487968_100488293_100489835_100491199
ES.37407.46	chrX	+	5099	8	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-47	0	intron_retention	FALSE	canonical	3	3075	junction_4	344.532750731379	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473293	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.47	chrX	+	1859	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	134	569	-46	120	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCATTCCTTCTCTCTCT	NA	False	NA	NA	False	AATGAA	-20	NA	100473294	100491628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.49	chrX	+	1585	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-45	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1344.67375993627	2156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAGTTGCATTGTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	100473295	100491332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483066_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.50	chrX	+	4043	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-45	0	intron_retention	FALSE	canonical	3	3075	junction_4	308.936527101892	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473295	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.53	chrX	+	4895	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-43	-4	intron_retention	FALSE	canonical	3	397	junction_1	1076.1098433997	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100473297	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724
ES.37407.54	chrX	+	2413	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-43	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1092.09430313602	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473297	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486634_100486911_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.55	chrX	+	6692	8	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-41	-6	intron_retention	FALSE	canonical	3	3075	junction_3	317.0898282564	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCTGTGCTGTT	NA	False	NA	14	True	ATTAAA	-15	NA	100473299	100492191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100483287_100485121_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.56	chrX	+	2452	13	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1369.43698893621	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473299	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100482154_100482185_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.59	chrX	+	4302	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-38	-3	intron_retention	FALSE	canonical	3	3075	junction_4	323.300339274489	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473302	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.60	chrX	+	2452	13	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-38	140637	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	1047.41860927499	2675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGATAAACTATTGGATTA	NA	False	NA	NA	False	AATAAA	-7	NA	100473302	100632834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199_100492198_100632802
ES.37407.61	chrX	+	4810	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	3075	junction_4	325.581019102773	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473309	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100489835_100491199
ES.37407.62	chrX	+	2400	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1090.72251434807	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCTGTGCTGTT	NA	False	NA	14	True	ATTAAA	-15	NA	100473309	100492191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485128_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.64	chrX	+	2663	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	27	intron_retention	FALSE	canonical	3	3075	junction_4	295.922979844418	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGCATTGTCTAGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	100473310	100491336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.65	chrX	+	5064	9	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	150	1	-30	-1	intron_retention	FALSE	canonical	3	3075	junction_4	340.886986404585	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473310	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293
ES.37407.69	chrX	+	3224	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1092.87700532143	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCTGTGCTGTT	NA	False	NA	14	True	ATTAAA	-15	NA	100473310	100492191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486242_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.7	chrX	+	2959	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-74	-1	intron_retention	FALSE	canonical	3	3075	junction_4	309.965175463309	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473266	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.70	chrX	+	4281	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	0	intron_retention	FALSE	canonical	3	3075	junction_4	325.288931396211	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473310	100492197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724
ES.37407.71	chrX	+	5659	8	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-30	-3	intron_retention	FALSE	canonical	3	3075	junction_4	345.318486535049	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473310	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487098_100487882_100487968_100488293_100488941_100489724
ES.37407.73	chrX	+	6439	7	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-28	-6	intron_retention	FALSE	canonical	3	3075	junction_4	371.594948237399	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCATTTTCTGTGCTGTT	NA	False	NA	14	True	ATTAAA	-15	NA	100473312	100492191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487968_100488293_100488941_100489724
ES.37407.74	chrX	+	2989	11	ISM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	302	1	122	-1	3prime_fragment	FALSE	canonical	3	3075	junction_3	311.365958319146	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	False	NA	19	True	ATTAAA	-20	NA	100473462	100492196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.75	chrX	+	2537	11	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	584	-4	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_1	1099.92247454082	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100473924	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100474172_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.76	chrX	+	1458	8	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-323	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1624.60483107212	2163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100486588	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199_100491617_100491758
ES.37407.77	chrX	+	4765	2	ISM	ENSMUSG00000031311.18	ENSMUST00000136251.8	1337	5	191	-685	191	-4	intron_retention	FALSE	canonical	3	3435	junction_1	0	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTGCTGTTTT	NA	False	NA	16	True	ATTAAA	-17	NA	100487102	100492193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100487968_100488293
ES.37407.78	chrX	+	7934	44	Fusion	ENSMUSG00000031312.6_ENSMUSG00000031314.19	novel	7331	39	NA	NA	-230	0	intron_retention	FALSE	non_canonical	0	0	junction_4	108.132197800608	571	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	1136	False	NA	NA	False	AATAAA	-24	NA	100495486	100644640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_100495631_100495720_100495821_100496079_100496194_100501354_100501414_100507485_100507686_100508257_100508394_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.79	chrX	+	190	1	Intergenic	novelGene_30604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATACAATGTATTTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	100520190	100520380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100520200_100520400
ES.37407.8	chrX	+	5974	9	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-73	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	1588.41934009883	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473267	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483566_100483760_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ES.37407.80	chrX	+	7220	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-10458	-5	intron_retention	FALSE	canonical	0	0	junction_1	78.7511640858429	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100565881	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100565955_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605682_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.81	chrX	+	1192	2	Intergenic	novelGene_30609	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100565884	100567326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100567028_100567277
ES.37407.82	chrX	+	7486	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-10453	-5	intron_retention	FALSE	canonical	0	0	junction_1	68.8335040663432	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100565886	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100565955_100571024_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.83	chrX	+	1199	2	Intergenic	novelGene_30610	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCTGTCTTTCACATG	NA	False	NA	NA	False	NA	NA	NA	100565899	100567350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100567019_100567270
ES.37407.84	chrX	+	3150	1	Intergenic	novelGene_30611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCTAGAGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	100568299	100571449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100568300_100571400
ES.37407.85	chrX	+	7189	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5147	-3	intron_retention	FALSE	canonical	3	80	junction_5	58.3892338670319	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGAGAGTGATTTTAAG	NA	False	NA	NA	False	AATAAA	-21	NA	100571192	100644637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.86	chrX	+	6092	40	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5145	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9787877546078	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571194	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.87	chrX	+	7210	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5145	-7	intron_retention	FALSE	canonical	0	0	junction_20	73.5480320565451	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571194	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600402_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.88	chrX	+	7274	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5145	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	66.1647611895388	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571194	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.89	chrX	+	7702	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5142	-5	intron_retention	FALSE	canonical	1	1	junction_19	76.6622625094955	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571197	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600425_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.9	chrX	+	2269	12	NNC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-73	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1375.77676331567	2170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCTGTGCTGTTTTT	NA	False	NA	17	True	ATTAAA	-18	NA	100473267	100492194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485244_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ES.37407.90	chrX	+	6151	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5141	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.5704755737003	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571198	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.91	chrX	+	7030	38	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5141	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	77.8357450919874	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCGAGAGTGATTTTAAG	NA	False	NA	NA	False	AATAAA	-21	NA	100571198	100644637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.92	chrX	+	6117	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5133	-5	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_39	65.2100938851509	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571206	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.93	chrX	+	7523	39	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5132	286	intron_retention	FALSE	canonical	0	0	junction_5	66.432609095583	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCTCCCACCCTTCCC	NA	False	NA	NA	False	NA	NA	NA	100571207	100644926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582791_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.94	chrX	+	7161	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5132	-10	intron_retention	FALSE	canonical	2	11	junction_17	72.4089264633784	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATAGAATCGAGAGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	100571207	100644630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596432_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.95	chrX	+	7197	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5131	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	70.2809606856868	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571208	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.96	chrX	+	6118	40	NNC	ENSMUSG00000031314.19	novel	5954	39	NA	NA	-5131	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.7886607912852	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCAATAGAATCGAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	100571208	100644627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582798_100584358_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
ES.37407.98	chrX	+	7189	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5129	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	81.9627981282259	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATCGAGAGTGATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	100571210	100644635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571293_100576431_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596432_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37407.99	chrX	+	7221	39	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5128	-7	intron_retention	FALSE	canonical	3	40	junction_1	66.3305800131082	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATCGAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-17	NA	100571211	100644633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100571348_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ES.37408.1	chrX	+	182	1	Intergenic	novelGene_30614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTCAATACGTATGCT	NA	False	NA	NA	False	NA	NA	NA	100667692	100667874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100667700_100667900
ES.37409.1	chrX	+	178	2	Intergenic	novelGene_30616	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100675765	100706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100675924_100706481
ES.37409.10	chrX	+	6900	21	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-463	intron_retention	FALSE	canonical	3	162	junction_1	115.690740770383	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTCCTGCATGATAGGG	NA	False	NA	NA	False	AATAGA	-16	NA	100683664	100726083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.11	chrX	+	8801	21	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_1	109.796356952314	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683667	100727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.12	chrX	+	3396	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	-472	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGACTTACTTCCTGC	NA	False	NA	NA	False	AATAGA	-7	NA	100683667	100726074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.13	chrX	+	5386	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	-2	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683667	100727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.14	chrX	+	6923	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	153.490759406358	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATGGCTTGGTGTAGT	NA	False	NA	11	True	AATAAA	-16	NA	100683667	100727953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100697581_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.15	chrX	+	7563	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	1	93	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGTTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	100683668	100726857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.16	chrX	+	3809	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	1	-58	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCATTTTAGTGTCT	NA	False	NA	NA	False	TATAAA	-14	NA	100683668	100726488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.17	chrX	+	6660	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	1	-592	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGCCCTATACCTGAG	NA	False	NA	1	True	AATAAA	-14	NA	100683668	100725954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.18	chrX	+	6831	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	1	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.760940865634	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCATTTTAGTGTC	NA	False	NA	NA	False	TATAAA	-13	NA	100683668	100726487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100696176_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.19	chrX	+	5248	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	3	-1411	1	0	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683668	100727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.2	chrX	+	180	1	Intergenic	novelGene_30615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	100675765	100675945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100675800_100675900
ES.37409.20	chrX	+	7496	22	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	0	-3	intron_retention	FALSE	canonical	3	98	junction_1	129.631397893133	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTACCTGTTTCACC	NA	False	NA	NA	False	AATATA	-16	NA	100683669	100726761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.21	chrX	+	4188	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	1	1195	1	-2	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACCTGTTTCACCA	NA	False	NA	NA	False	AATATA	-17	NA	100683670	100726762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.22	chrX	+	8765	21	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	4	0	intron_retention	FALSE	canonical	3	162	junction_1	115.690740770383	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683673	100727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.23	chrX	+	3773	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	8	59	4	-59	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCATTTTAGTGTC	NA	False	NA	NA	False	TATAAA	-13	NA	100683673	100726487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.24	chrX	+	5241	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.187177039069	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100683673	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683935_100686617_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.25	chrX	+	5393	24	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	173.632730617752	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTGGTGTAGTT	NA	False	NA	12	True	AATAAA	-17	NA	100683673	100727954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100697581_100697735_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.26	chrX	+	7560	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	9	-5	intron_retention	FALSE	canonical	3	98	junction_1	141.123432247277	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATGGCTTGGTGTAG	NA	False	NA	10	True	AATAAA	-15	NA	100683678	100727952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.28	chrX	+	7167	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	13	-71	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGAGCCTATATCAGT	NA	False	NA	NA	False	TATAAA	-1	NA	100683682	100726475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.29	chrX	+	3274	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-15	-579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	155.187177039069	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGCCTCAACCTTCTG	NA	False	NA	14	True	AATAAA	-27	NA	100683684	100725967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686579_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.3	chrX	+	181	1	Intergenic	novelGene_30617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATAGGAACTATTT	NA	False	NA	NA	False	NA	NA	NA	100676805	100676986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100676800_100677000
ES.37409.30	chrX	+	3987	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	15	1382	-15	29	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCCAGCTCCCGTTAAA	NA	False	NA	NA	False	NA	NA	NA	100683684	100726575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.31	chrX	+	4081	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-14	82	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_15	161.345197410003	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCTTTCTAAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	100683685	100726846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713688_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.33	chrX	+	4528	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-14	383	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTGAGTTCTTCATGG	NA	False	NA	NA	False	ATTAAA	-14	NA	100683685	100727147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.35	chrX	+	3068	22	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-6	-581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	161.464569662313	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGAGCCTCAACCTTC	NA	False	NA	12	True	AATAAA	-25	NA	100683693	100725965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100704903_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.36	chrX	+	3075	4	FSM	ENSMUSG00000034160.14	ENSMUST00000155792.2	1333	4	-50	-1692	-4	0	multi-exon	FALSE	canonical	3	162	junction_1	90.0530707724926	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTCTATGGGCCTG	NA	False	NA	NA	False	GATAAA	-44	NA	100683695	100698192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745
ES.37409.37	chrX	+	5319	22	NNC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_1	143.339424012344	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100683696	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683929_100686617_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.38	chrX	+	7827	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-3	385	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGAGTTCTTCATGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	100683696	100727149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.39	chrX	+	3214	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	33	593	-1	-593	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTGCCCTATACCTGA	NA	False	NA	0	True	AATAAA	-13	NA	100683698	100725953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.4	chrX	+	5503	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-215	7	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTTTGTCTCATTA	NA	False	NA	22	True	AATAAA	-27	NA	100683450	100727964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.40	chrX	+	5326	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	1	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGGTGTAGTTTGTC	NA	False	NA	16	True	AATAAA	-21	NA	100683698	100727958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.41	chrX	+	4023	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.187177039069	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTCACCAGTGTTT	NA	False	NA	NA	False	AATATA	-23	NA	100683698	100726768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686617_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.43	chrX	+	3425	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	1930	-1	-519	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTGTGTTGCAGACGG	NA	False	NA	74	True	NA	NA	NA	100683698	100726027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.44	chrX	+	5967	19	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-6762	intron_retention	FALSE	canonical	3	98	junction_1	125.493249043746	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCCGTACCATTATTGT	NA	False	NA	NA	False	NA	NA	NA	100683698	100719784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754
ES.37409.45	chrX	+	3473	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-594	intron_retention	FALSE	canonical	1	4	junction_5	166.095915981655	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATTGCCCTATACCTG	NA	False	NA	-1	True	AATAAA	-12	NA	100683698	100725952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100697581_100697735_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.46	chrX	+	3335	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-579	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGCCTCAACCTTCTG	NA	False	NA	14	True	AATAAA	-27	NA	100683698	100725967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.47	chrX	+	4994	21	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	159.718064100464	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATGGCTTGGTGTAG	NA	False	NA	10	True	AATAAA	-15	NA	100683698	100727952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.48	chrX	+	5136	22	NNC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-1	-49	intron_retention	FALSE	canonical	0	0	junction_4	142.426079804988	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTCTGACCTAATG	NA	False	NA	NA	False	TATAAA	-23	NA	100683698	100726497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100697988_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.49	chrX	+	3758	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	29	1597	-1	-186	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTTGATTCTTCTGAG	NA	False	NA	NA	False	TTTAAA	-35	NA	100683698	100726360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.5	chrX	+	4452	24	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-102	116	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	169.918839739149	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTGTTCTTCCCATT	NA	False	NA	NA	False	TTTAAA	-2	NA	100683563	100726880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100697581_100697728_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.50	chrX	+	4859	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	-388	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTTACAGGTAAACTG	NA	False	NA	NA	False	AATAAA	-21	NA	100683699	100727569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.51	chrX	+	4021	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	34	-215	0	-3	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTTACCTGTTTCACC	NA	False	NA	NA	False	AATATA	-16	NA	100683699	100726761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.52	chrX	+	5390	24	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	169.918839739149	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTGGTGTAGTT	NA	False	NA	12	True	AATAAA	-17	NA	100683699	100727954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100697581_100697728_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.54	chrX	+	5333	22	NNC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_2	149.293043034204	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATGGCTTGGTGTAG	NA	False	NA	10	True	AATAAA	-15	NA	100683700	100727952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683929_100686581_100686763_100687567_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.55	chrX	+	5471	23	NNC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	4	-2	intron_retention	FALSE	canonical	1	4	junction_5	166.095915981655	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100683703	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100697581_100697735_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.57	chrX	+	8633	21	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-5	-127	intron_retention	FALSE	canonical	3	215	junction_1	109.796356952314	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTTTTTTTTTTCC	NA	False	NA	NA	False	AATAGA	-21	NA	100683708	100727830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.58	chrX	+	5126	21	ISM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	2909	2	2833	-2	3prime_fragment	FALSE	canonical	3	202	junction_3	111.160008546239	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100686578	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.59	chrX	+	4613	20	ISM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	4082	132	4006	-132	3prime_fragment	FALSE	canonical	3	202	junction_2	112.281280152019	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACTGATTTGTTTTTTT	NA	False	NA	NA	False	AATAGA	-16	NA	100687751	100727825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.6	chrX	+	8694	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-24	4	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTAGTTTGTCTCA	NA	False	NA	19	True	AATAAA	-24	NA	100683641	100727961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.60	chrX	+	4920	18	ISM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	13666	198	-1619	-198	3prime_fragment	FALSE	canonical	3	266	junction_15	98.6391136440531	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCATGTGAAGTGATCTT	NA	False	NA	NA	False	TTTAAA	-23	NA	100697331	100726348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.61	chrX	+	3393	17	ISM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	14591	3608	-694	-3608	internal_fragment	FALSE	canonical	3	266	junction_15	90.9761086425991	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCGATCTAGAATAGTAAG	NA	False	NA	NA	False	NA	NA	NA	100698256	100722938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829
ES.37409.62	chrX	+	5138	18	NNC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-227	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	143.080783918189	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGCTTGGTGTAGTT	NA	False	NA	12	True	AATAAA	-17	NA	100698723	100727954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722572_100722829_100722954_100725761
ES.37409.63	chrX	+	4933	18	NNC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	146.37218522997	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATGGCTTGGTGTAGT	NA	False	NA	11	True	AATAAA	-16	NA	100698916	100727953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711128_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.64	chrX	+	6186	17	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	319	-2	intron_retention	FALSE	canonical	3	266	junction_14	100.65207322132	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100699269	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.65	chrX	+	171	1	Intergenic	novelGene_30620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100706330	100706501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100706300_100706500
ES.37409.66	chrX	+	3736	10	NNC	ENSMUSG00000034160.14	novel	3521	17	NA	NA	14235	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	189.513086293647	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	6344	False	NA	13	True	AATAAA	-18	NA	100713185	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722572_100722832_100722954_100725761
ES.37409.67	chrX	+	3401	9	ISM	ENSMUSG00000034160.14	ENSMUST00000147635.2	3521	17	14684	-1191	14684	-2	3prime_fragment	FALSE	canonical	3	266	junction_6	132.277584552335	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	6793	False	NA	13	True	AATAAA	-18	NA	100713634	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.68	chrX	+	3182	7	ISM	ENSMUSG00000034160.14	ENSMUST00000147635.2	3521	17	17696	-1188	17696	-5	3prime_fragment	FALSE	canonical	3	266	junction_4	125.057875490599	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATGGCTTGGTGTAG	9805	False	NA	10	True	AATAAA	-15	NA	100716646	100727952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.69	chrX	+	2003	6	ISM	ENSMUSG00000034160.14	ENSMUST00000147635.2	3521	17	18048	-252	18048	252	3prime_fragment	FALSE	canonical	3	266	junction_3	107.566537547696	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGGCAGTTATTTTATT	NA	False	NA	NA	False	NA	NA	NA	100716998	100727016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.7	chrX	+	8719	22	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-23	0	intron_retention	FALSE	canonical	3	98	junction_1	129.631397893133	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683642	100727957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.70	chrX	+	2575	3	ISM	ENSMUSG00000034160.14	ENSMUST00000147635.2	3521	17	23360	-1191	23360	-2	3prime_fragment	FALSE	canonical	3	288	junction_2	5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	False	NA	13	True	AATAAA	-18	NA	100722310	100727955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_100722568_100722829_100722954_100725761
ES.37409.8	chrX	+	6883	21	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	-9	-518	intron_retention	FALSE	canonical	3	215	junction_1	109.796356952314	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGTGTTGCAGACGGA	NA	False	NA	75	True	NA	NA	NA	100683656	100726028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.37409.9	chrX	+	4099	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTCACCAGTGTTT	NA	False	NA	NA	False	AATATA	-23	NA	100683658	100726768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ES.3741.1	chr10	+	2323	8	NNC	ENSMUSG00000112249.2	novel	791	4	NA	NA	-4809	253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.12485826771597	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGTGTGTATTTGTATT	NA	False	NA	NA	False	AATAAA	-15	NA	111430272	111447496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111431112_111435081_111435200_111441281_111441408_111442090_111442158_111443883_111443989_111444388_111444613_111446431_111446679_111446899
ES.37410.1	chrX	-	3128	2	Antisense	novelGene_ENSMUSG00000083897.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100545531	100478598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100481633_100545437
ES.37410.2	chrX	-	172	1	Intergenic	novelGene_30603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGCAACTTGTTTAC	NA	False	NA	NA	False	NA	NA	NA	100490586	100490414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100490400_100490600
ES.37410.3	chrX	-	158	1	Intergenic	novelGene_30605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	100535814	100535656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100535700_100535800
ES.37410.4	chrX	-	214	1	Intergenic	novelGene_30606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAATGATACCCC	NA	False	NA	NA	False	NA	NA	NA	100536803	100536589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100536600_100536800
ES.37410.5	chrX	-	252	1	Intergenic	novelGene_30607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATCCTTTAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	100538175	100537923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100537900_100538200
ES.37410.6	chrX	-	179	1	Intergenic	novelGene_30608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTGGTAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	100541892	100541713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100541700_100541900
ES.37411.1	chrX	-	177	2	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	159	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	100705445	100565430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100565558_100705395
ES.37411.10	chrX	-	4945	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTACAAGCCACAAAGGAC	NA	False	NA	NA	False	TTTAAA	-42	NA	100719787	100696223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.11	chrX	-	3996	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATGACATTTTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	100719788	100697173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.13	chrX	-	4097	14	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATGACATTTTTCAAAC	NA	False	NA	NA	False	NA	NA	NA	100719787	100697173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717317_100719752
ES.37411.14	chrX	-	4005	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717112_100717317_100719752
ES.37411.15	chrX	-	3973	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699355_100704865_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717321_100719755
ES.37411.16	chrX	-	5569	14	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.2	chrX	-	6179	19	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTGGCCAGCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	100719787	100579036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100579257_100683817_100683932_100686582_100686760_100687549_100687795_100695741_100699338_100704852_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.20	chrX	-	3971	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716172_100716641_100716818_100716926_100717044_100717145_100717321_100719755
ES.37411.25	chrX	-	5255	18	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100726584	100697226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699346_100704855_100704936_100706962_100707163_100707449_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711753_100713355_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752_100719910_100722315_100722566_100722827_100722946_100725757
ES.37411.28	chrX	-	3505	12	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100713361_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.3	chrX	-	382	1	Intergenic	novelGene_30612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAATGAATCAG	NA	False	NA	NA	False	NA	NA	NA	100609605	100609223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100609200_100609600
ES.37411.33	chrX	-	3943	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708349_100710881_100711041_100711123_100711224_100711583_100711770_100713365_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.34	chrX	-	3938	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100697228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699338_100704852_100704937_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711770_100713363_100713520_100713634_100713725_100716051_100716178_100716646_100716814_100716923_100717042_100717144_100717317_100719752
ES.37411.35	chrX	-	3215	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAACAAGAAGAGTTAG	NA	False	NA	NA	False	AAAAAG	-10	NA	100719787	100697953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.36	chrX	-	2515	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCAGGATGAGCGTTAA	NA	False	NA	NA	False	AAAACA	-42	NA	100719787	100698651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717315_100719752
ES.37411.37	chrX	-	2024	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGGGAGGGGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	100719787	100699146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711768_100713363_100713520_100713634_100713725_100716051_100716175_100716642_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.38	chrX	-	2010	15	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTGGGG	NA	False	NA	NA	False	NA	NA	NA	100719787	100699158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711770_100713365_100713520_100713634_100713725_100716051_100716181_100716650_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.39	chrX	-	789	1	Intergenic	novelGene_30619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACCAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	100702281	100701492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100701500_100702300
ES.37411.4	chrX	-	225	1	Intergenic	novelGene_30613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGAACACTGAGCTG	NA	False	NA	NA	False	AATAAA	-11	NA	100649653	100649428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100649400_100649700
ES.37411.40	chrX	-	2813	13	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.41	chrX	-	2153	14	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.42	chrX	-	6077	12	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100713520_100713634_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.44	chrX	-	3750	13	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.46	chrX	-	4480	13	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.47	chrX	-	3787	8	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAACAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704623_100709410_100711764_100713360_100713520_100713634_100713725_100716051_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.49	chrX	-	1422	2	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100707111	100704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100705311_100706447
ES.37411.5	chrX	-	2629	19	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGCGGCGAGGGCTCC	NA	False	NA	NA	False	NA	NA	NA	100719787	100683703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100683932_100686612_100686755_100687548_100687795_100695741_100695812_100699226_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708351_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.50	chrX	-	2380	14	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716393_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.51	chrX	-	5352	8	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100708350_100710882_100711041_100711123_100711222_100711583_100713520_100713634_100713725_100716051_100717317_100719752
ES.37411.52	chrX	-	2698	12	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716818_100716926_100717317_100719752
ES.37411.53	chrX	-	2628	13	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100704552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716819_100716928_100717044_100717112_100717317_100719752
ES.37411.55	chrX	-	330	1	Intergenic	novelGene_30621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100714402	100714072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100714100_100714400
ES.37411.56	chrX	-	2941	4	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAGCTGGGCGGTAGT	NA	False	NA	NA	False	NA	NA	NA	100719787	100714200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100716820_100716927_100717044_100717145_100717317_100719752
ES.37411.58	chrX	-	2471	5	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAGCTGGGCGGTAGT	NA	False	NA	NA	False	NA	NA	NA	100719787	100714200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.59	chrX	-	5061	3	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAAAGCTGGGCGGTAGT	NA	False	NA	NA	False	NA	NA	NA	100719788	100714200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100716818_100716926_100717655_100718072
ES.37411.6	chrX	-	2657	19	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAAATGGCGGCGAGG	NA	False	NA	NA	False	NA	NA	NA	100719787	100683708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100683932_100686582_100686760_100687549_100687795_100695741_100695812_100699226_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.62	chrX	-	2558	4	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719788	100714224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100716175_100716642_100717044_100717145_100717317_100719752
ES.37411.63	chrX	-	5144	2	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100714225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100717655_100718072
ES.37411.64	chrX	-	3016	3	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100719787	100714226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100716818_100716926_100717317_100719752
ES.37411.65	chrX	-	206	2	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAATCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	100719787	100717145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100717317_100719752
ES.37411.66	chrX	-	2003	1	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	100719787	100717784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100717800_100719800
ES.37411.67	chrX	-	1200	3	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	100726584	100722310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100722566_100722827_100722946_100725757
ES.37411.7	chrX	-	6070	18	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTGAAATGGCGGCGA	NA	False	NA	NA	False	NA	NA	NA	100719787	100683710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100683932_100686582_100686760_100687549_100687795_100695741_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37411.8	chrX	-	177	1	Intergenic	novelGene_30618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCACG	NA	False	NA	NA	False	NA	NA	NA	100688428	100688251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100688300_100688400
ES.37411.9	chrX	-	5769	16	Antisense	novelGene_ENSMUSG00000034160.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCACG	NA	False	NA	NA	False	NA	NA	NA	100719787	100688251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_100688293_100695440_100699345_100704855_100704936_100706962_100707161_100707448_100707590_100708249_100708350_100710882_100711041_100711123_100711222_100711583_100711764_100713360_100713520_100713634_100713725_100716051_100716178_100716646_100716818_100716926_100717044_100717145_100717317_100719752
ES.37412.1	chrX	-	155	1	Intergenic	novelGene_30622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	100731029	100730874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100730900_100731000
ES.37413.1	chrX	+	200	1	Intergenic	novelGene_30623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAATTTGGTATTT	8633	False	NA	NA	False	NA	NA	NA	100738816	100739016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100738800_100739000
ES.37414.1	chrX	+	1972	6	Intergenic	novelGene_30624	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	9258	False	NA	27	True	AATAAA	-22	NA	100739441	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749298_100749621
ES.37414.10	chrX	+	1208	1	Intergenic	novelGene_30633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	7502	False	NA	27	True	AATAAA	-22	NA	100748594	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100748600_100749800
ES.37414.11	chrX	+	531	2	Intergenic	novelGene_30634	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	7853	False	NA	27	True	AATAAA	-22	NA	100748945	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100749311_100749636
ES.37414.2	chrX	+	2139	6	Intergenic	novelGene_30627	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTCTGGTTGAAGTT	9260	False	NA	26	True	AATAAA	-21	NA	100739443	100749801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749468_100749621
ES.37414.3	chrX	+	2139	6	Intergenic	novelGene_30628	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	9260	False	NA	27	True	AATAAA	-22	NA	100739443	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749490_100749644
ES.37414.4	chrX	+	1958	6	Intergenic	novelGene_30625	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCCAAAGTCTCTGGTTG	9260	False	NA	21	True	AATAAA	-16	NA	100739443	100749796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749292_100749621
ES.37414.5	chrX	+	2136	6	Intergenic	novelGene_30626	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTCTCTGGTTGAAGT	9260	False	NA	25	True	AATAAA	-20	NA	100739443	100749800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749481_100749636
ES.37414.6	chrX	+	1975	6	Intergenic	novelGene_30630	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	22.4641937313584	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGAAGTTATTGGTA	9260	False	NA	33	True	AATAAA	-28	NA	100739443	100749808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100749320_100749644
ES.37414.7	chrX	+	1777	7	Intergenic	novelGene_30629	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_5	26.1177887442427	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	9260	False	NA	27	True	AATAAA	-22	NA	100739443	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884_100748225_100748417_100749298_100749621
ES.37414.8	chrX	+	1359	3	Intergenic	novelGene_30631	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	7110	False	NA	27	True	AATAAA	-22	NA	100748202	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100748210_100748281_100749298_100749466
ES.37414.9	chrX	+	1274	2	Intergenic	novelGene_30632	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTCTGGTTGAAGTTA	7110	False	NA	27	True	AATAAA	-22	NA	100748202	100749802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100749402_100749727
ES.37415.1	chrX	-	4065	1	FSM	ENSMUSG00000084197.2	ENSMUST00000122027.2	526	1	-488	-3051	-488	3051	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	100753655	100749590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100749600_100753700
ES.37415.2	chrX	-	2658	2	Intergenic	novelGene_30635	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	100753655	100749590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100752033_100753439
ES.37415.3	chrX	-	3883	2	Genic_Genomic	ENSMUSG00000084197.2	novel	526	1	NA	NA	-488	3051	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	100753655	100749590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_100751938_100752119
ES.37415.4	chrX	-	166	1	Intergenic	novelGene_30636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAGATGTGATTCTGG	NA	False	NA	NA	False	AAAACA	-17	NA	100753512	100753346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100753300_100753500
ES.37416.1	chrX	+	189	1	Intergenic	novelGene_30637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTGAGATTGTTCAC	NA	False	NA	NA	False	NA	NA	NA	100762135	100762324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100762100_100762300
ES.37417.1	chrX	+	201	1	Intergenic	novelGene_30638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAGGTTTAAATATTG	3340	False	NA	NA	False	NA	NA	NA	100771070	100771271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100771100_100771300
ES.37418.1	chrX	-	176	1	Intergenic	novelGene_30639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAGATTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	100773073	100772897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100772900_100773100
ES.37419.1	chrX	-	2247	1	Intergenic	novelGene_30640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAACTAGCA	NA	False	NA	NA	False	NA	NA	NA	100825780	100823533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100823500_100825800
ES.3742.1	chr10	-	179	1	Intergenic	novelGene_2848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	111775606	111775427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_111775400_111775600
ES.37420.1	chrX	-	2354	7	NNC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	110.674322024377	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCCGGCTCTGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834255_100834449_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.10	chrX	-	2013	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-22	0	-22	0	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838051	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.11	chrX	-	2614	5	NNC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-21	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	118.612815496472	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838050	100833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834905_100835166_100835250_100835786_100835944_100836542
ES.37420.12	chrX	-	651	5	NNC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	1040	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	120.928439583086	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100835829	100833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834505_100834844_100834904_100835166_100835250_100835786
ES.37420.13	chrX	-	3470	3	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	258	junction_2	25	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838045	100833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100835250_100835786
ES.37420.14	chrX	-	4002	2	ISM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	-11	2	-11	-2	intron_retention	FALSE	canonical	3	308	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_100834130_100834212
ES.37420.15	chrX	-	2526	5	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	117	junction_2	79.2539431195698	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100834505_100834844_100835250_100835786_100835944_100836542
ES.37420.16	chrX	-	4098	1	Genic_Genomic	ENSMUSG00000045010.15	novel	NA	NA	NA	NA	-25	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGTACTTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	100838054	100833956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_100834000_100838100
ES.37420.17	chrX	-	2277	6	NNC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-25	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	120.992561754845	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838054	100833957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835265_100835786_100835944_100836542
ES.37420.18	chrX	-	328	4	NNC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	1990	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	126.944432287867	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACAGCTGTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	100834879	100833960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834255_100834422_100834505_100834844
ES.37420.2	chrX	-	2564	6	NIC	ENSMUSG00000045010.15	novel	1190	7	NA	NA	-26	2	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCCGGCTCTGAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	100838055	100833656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.3	chrX	-	2922	4	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-42	23	intron_retention	FALSE	canonical	3	142	junction_3	69.5317673201729	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATCGTGTACTGTCTG	NA	False	NA	NA	False	NA	NA	NA	100838071	100833930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100835250_100835786_100835944_100836542
ES.37420.4	chrX	-	3194	4	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-11	3	intron_retention	FALSE	canonical	3	258	junction_3	26.2466929133727	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTTGCAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786
ES.37420.5	chrX	-	2267	6	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-26	0	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838055	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.6	chrX	-	2620	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-39	0	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838068	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.7	chrX	-	2065	7	FSM	ENSMUSG00000045010.15	ENSMUST00000124577.8	1190	7	-1170	295	-10	0	multi-exon	FALSE	canonical	3	11	junction_2	111.484926734016	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838039	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_100834130_100834212_100834255_100834440_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37420.8	chrX	-	2860	4	NNC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_2	125.867655363348	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838040	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100835242_100835786_100835944_100836542
ES.37420.9	chrX	-	2053	7	NNC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	110.674322024377	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838036	100833953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_100834130_100834212_100834255_100834449_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ES.37421.1	chrX	+	2226	6	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-43	3	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTTGCAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ES.37421.10	chrX	+	3896	3	NNC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	1	intron_retention	TRUE	non_canonical	0	0	junction_1	141.5	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGTACTTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	100838219	100842245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100840444_100840490_100841990_100842072
ES.37421.11	chrX	+	3148	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	1	intron_retention	FALSE	canonical	3	266	junction_1	7.58653778449403	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGTACTTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	100838219	100842245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100840444_100840965_100841049_100841321_100841990_100842072
ES.37421.12	chrX	+	2051	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-41	6	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGCAACTGTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	100838220	100842254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
ES.37421.13	chrX	+	2406	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-35	-380	-35	376	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTTTGTCCTATGTTC	NA	False	NA	NA	False	NA	NA	NA	100838226	100842624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ES.37421.15	chrX	+	993	7	NNC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-23	-3	intron_retention	FALSE	canonical	2	5	junction_1	102.217089243107	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACAGCTGTACTTTTG	NA	False	NA	NA	False	NA	NA	NA	100838238	100842241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100838373_100839575_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ES.37421.16	chrX	+	3582	3	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-22	0	intron_retention	FALSE	canonical	3	236	junction_1	23.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838239	100842244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100841368_100841707_100841990_100842072
ES.37421.17	chrX	+	1026	8	NNC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.315361739281	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838239	100842244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100838373_100839368_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
ES.37421.18	chrX	+	1277	8	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-22	1	intron_retention	FALSE	canonical	0	0	junction_2	123.345871765668	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGTACTTTTGCAAC	NA	False	NA	NA	False	NA	NA	NA	100838239	100842245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100838373_100838725_100838791_100839359_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ES.37421.19	chrX	+	2813	4	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	266	junction_2	15.121728296285	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100839695_100840283_100840444_100840965_100841990_100842072
ES.37421.2	chrX	+	1979	6	FSM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	-43	4	-43	0	multi-exon	FALSE	canonical	2	3	junction_4	112.716280989039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838218	100842244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841947_100841990_100842072
ES.37421.20	chrX	+	4007	1	Genic_Genomic	ENSMUSG00000046774.18	novel	NA	NA	NA	NA	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_100838200_100842200
ES.37421.21	chrX	+	808	8	NNC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	110.314393014341	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838243	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100838373_100839575_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ES.37421.22	chrX	+	1209	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-18	0	intron_retention	FALSE	canonical	3	15	junction_1	98.5675177508065	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838243	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100838373_100839359_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ES.37421.23	chrX	+	2787	5	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-18	0	intron_retention	FALSE	canonical	3	236	junction_3	18.7949461292125	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838243	100842248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
ES.37421.24	chrX	+	2436	5	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	236	junction_3	24.5662369930765	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838276	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100839695_100840283_100840444_100840965_100841368_100841707_100841990_100842072
ES.37421.3	chrX	+	3428	3	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-43	3	intron_retention	FALSE	canonical	3	266	junction_1	8.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTTGCAACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100840444_100840965_100841990_100842072
ES.37421.4	chrX	+	3948	2	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-43	1	intron_retention	FALSE	canonical	3	283	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTACTTTTGCAACTGTT	NA	False	NA	NA	False	NA	NA	NA	100838218	100842249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100841990_100842072
ES.37421.5	chrX	+	2559	5	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	266	junction_2	13.1600721882519	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838218	100842244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841990_100842072
ES.37421.6	chrX	+	1720	8	NNC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_1	111.621079129896	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGTACTTTTGCAACT	NA	False	NA	NA	False	NA	NA	NA	100838219	100842246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100838373_100838687_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ES.37421.7	chrX	+	3983	2	NNC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTACTTTTGCAACTG	NA	False	NA	NA	False	NA	NA	NA	100838219	100842247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_100840444_100840488
ES.37421.8	chrX	+	2043	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	-42	-10	-42	6	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGCAACTGTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	100838219	100842254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ES.37421.9	chrX	+	3084	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	-42	0	intron_retention	FALSE	canonical	3	236	junction_2	19.4307888557196	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838219	100842248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100840444_100840965_100841368_100841707_100841990_100842072
ES.37422.1	chrX	+	241	1	Intergenic	novelGene_30641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTTATTTGGTTCTCTG	NA	False	NA	NA	False	AGTAAA	-44	NA	100868673	100868914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100868700_100868900
ES.37423.1	chrX	+	10272	6	NIC	ENSMUSG00000079481.12	novel	12971	8	NA	NA	19	-2272	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.42928563989645	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGAGTAACTATTTTA	NA	False	NA	NA	False	NA	NA	NA	100893009	101133389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_100893454_100991259_100991329_101119767_101119900_101121087_101123404_101125294_101125428_101126211
ES.37423.2	chrX	+	162	1	Intergenic	novelGene_30643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	100958185	100958347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_100958200_100958300
ES.37423.3	chrX	+	9933	4	NIC	ENSMUSG00000079481.12	novel	475	2	NA	NA	-208	-2274	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	3.29983164553722	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGGGAGTAACTATTT	NA	False	NA	NA	False	NA	NA	NA	101048441	101133387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101048750_101121087_101123404_101125294_101125428_101126211
ES.37423.4	chrX	+	7295	5	NIC	ENSMUSG00000079481.12	novel	475	2	NA	NA	-22	-4858	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.80788655293195	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACACAAAAGATTTAA	NA	False	NA	NA	False	NA	NA	NA	101048627	101130803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101048750_101119767_101119900_101121087_101123404_101125294_101125428_101126211
ES.37423.5	chrX	+	491	2	NNC	ENSMUSG00000079481.12	novel	475	2	NA	NA	-12	-35376	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCAGCGTTTGACTG	NA	False	NA	NA	False	ATTAAA	-22	NA	101048637	101080196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101048750_101079817
ES.37423.6	chrX	+	2755	1	Intergenic	novelGene_30645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTAGTTTTAAGAATTCT	NA	False	NA	NA	False	NA	NA	NA	101073270	101076025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101073300_101076000
ES.37423.7	chrX	+	182	1	Intergenic	novelGene_30646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	101083252	101083434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101083300_101083400
ES.37423.8	chrX	+	6088	1	ISM	ENSMUSG00000079481.12	ENSMUST00000101339.8	12971	8	236580	3	13023	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTCTGCTTCCCTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	101129570	101135658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_101129600_101135700
ES.37423.9	chrX	+	5397	2	NNC	ENSMUSG00000079481.12	novel	12971	8	NA	NA	13661	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTCTGCTTCCCTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	101130208	101135658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101134686_101134738
ES.37424.1	chrX	-	2890	1	Intergenic	novelGene_30642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTGTACCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	100905860	100902970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100903000_100905900
ES.37425.1	chrX	-	178	1	Intergenic	novelGene_30644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTAAGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	100964691	100964513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_100964500_100964700
ES.37426.1	chrX	-	251	1	Intergenic	novelGene_30647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATGGATTAGAATAATT	NA	False	NA	NA	False	NA	NA	NA	101100135	101099884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101099900_101100100
ES.37427.1	chrX	+	574	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	-83	-2	-83	2	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTTCTATTTTGTTG	NA	False	NA	NA	False	AATAAA	-20	NA	101162969	101171277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
ES.37427.2	chrX	+	597	5	NNC	ENSMUSG00000079480.4	novel	489	4	NA	NA	44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	571.057571528476	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTGTTTTCTATTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	101163096	101171274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101163171_101164975_101165129_101165273_101165348_101170622_101170743_101171098
ES.37427.3	chrX	+	554	4	FSM	ENSMUSG00000079480.4	ENSMUST00000144367.2	530	4	-22	-2	-22	-1	multi-exon	FALSE	canonical	0	0	junction_1	540.53389245161	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTGTTTTCTATTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	101163152	101171274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_101163337_101165273_101165348_101170622_101170743_101171098
ES.37428.1	chrX	+	202	1	Intergenic	novelGene_30648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGACTCAACTTTCC	NA	False	NA	NA	False	NA	NA	NA	101174717	101174919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101174700_101174900
ES.37429.1	chrX	+	173	1	Intergenic	novelGene_30649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTATAAAAAGAAAATATC	NA	False	NA	NA	False	NA	NA	NA	101180781	101180954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101180800_101181000
ES.3743.1	chr10	+	5029	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	-2	-4	-2	4	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTAGTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	111808566	111824341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.10	chr10	+	3332	9	NIC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	3	-778	intron_retention	FALSE	canonical	3	346	junction_5	31.6780681229143	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGTAGTTTGTTTAT	NA	False	NA	1	True	ATTAAA	-39	NA	111808682	111822021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.11	chr10	+	2462	9	NIC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	3	-774	intron_retention	FALSE	canonical	0	0	junction_2	130.201226472718	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTTTGTTTATGATG	NA	False	NA	5	True	ATTAAA	-43	NA	111808682	111822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111808780_111811389_111811563_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.12	chr10	+	4176	8	ISM	ENSMUSG00000063334.17	ENSMUST00000075924.8	3451	9	4	752	4	-752	intron_retention	FALSE	canonical	3	311	junction_5	41.3763217311544	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTAGCAGTTTCTCATC	NA	False	NA	27	True	ATTAAA	-38	NA	111808683	111822047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868
ES.3743.13	chr10	+	2587	10	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	6	-774	intron_retention	FALSE	non_canonical	0	0	junction_7	124.56333606386	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTTTGTTTATGATG	NA	False	NA	5	True	ATTAAA	-43	NA	111808685	111822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815956_111818705_111818784_111818868_111818963_111820443
ES.3743.14	chr10	+	3642	9	NIC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	8	-808	intron_retention	FALSE	canonical	3	311	junction_5	38.4104071183839	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAAATAATGCAATTAAAG	NA	False	NA	-29	True	ATTAAA	-9	NA	111808687	111821991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111808780_111811389_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.15	chr10	+	3687	9	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	-7	-774	intron_retention	FALSE	non_canonical	0	0	junction_5	130.164319227659	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTTTGTTTATGATG	NA	False	NA	5	True	ATTAAA	-43	NA	111808690	111822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111808780_111811389_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815777_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.16	chr10	+	2607	11	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	-7	-798	intron_retention	FALSE	canonical	0	0	junction_9	153.733698322782	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAAAGTATTTCTTTT	NA	False	NA	-19	True	ATTAAA	-19	NA	111808690	111822001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111819567_111819610_111820443
ES.3743.17	chr10	+	4216	11	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	-2	672	intron_retention	FALSE	non_canonical	0	0	junction_10	119.06557017039	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATCCGGGAAAGCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	111808695	111825009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443_111823153_111824504
ES.3743.18	chr10	+	2666	10	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	210	-805	intron_retention	FALSE	canonical	1	3	junction_1	124.396320059897	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATGCAATTAAAGTAT	NA	False	NA	-26	True	ATTAAA	-12	NA	111808907	111821994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111809105_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.19	chr10	+	3498	7	ISM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	4497	957	4368	581	3prime_fragment	FALSE	canonical	3	311	junction_3	42.7343213614329	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTAATTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	111813065	111823380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.2	chr10	+	1527	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	1	3495	1	256	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCCAATGTTTGTTGC	NA	False	NA	NA	False	TTTAAA	-26	NA	111808569	111820842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.20	chr10	+	6449	3	NIC	ENSMUSG00000063334.17	novel	3451	9	NA	NA	5300	-787	intron_retention	FALSE	canonical	3	408	junction_2	18.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTTTAATTAAAGTAG	NA	False	NA	-8	True	ATTAAA	-30	NA	111813997	111822012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111818784_111818868_111818963_111820443
ES.3743.21	chr10	+	5375	2	Genic_Genomic	ENSMUSG00000063334.17	novel	5023	10	NA	NA	5864	-587	multi-exon	TRUE	canonical	0	0	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCACTAAATGCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	111814561	111819999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_111814634_111814696
ES.3743.22	chr10	+	3473	3	ISM	ENSMUSG00000063334.17	ENSMUST00000075924.8	3451	9	7045	774	7027	-774	intron_retention	FALSE	canonical	3	384	junction_1	30.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTTTGTTTATGATG	NA	False	NA	5	True	ATTAAA	-43	NA	111815724	111822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_111815963_111818705_111818784_111818868
ES.3743.3	chr10	+	4131	9	NNC	ENSMUSG00000063334.17	novel	5023	10	NA	NA	12	-756	intron_retention	FALSE	canonical	0	0	junction_5	132.66758270203	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAGGTAGCAGTTTCT	NA	False	NA	23	True	ATTAAA	-34	NA	111808580	111822043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814320_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.4	chr10	+	2717	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	16	2290	16	-752	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTAGCAGTTTCTCATC	NA	False	NA	27	True	ATTAAA	-38	NA	111808584	111822047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.5	chr10	+	2683	9	FSM	ENSMUSG00000063334.17	ENSMUST00000075924.8	3451	9	-6	774	-6	-774	multi-exon	FALSE	canonical	3	311	junction_5	40.3978263647934	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGTTTGTTTATGATG	NA	False	NA	5	True	ATTAAA	-43	NA	111808673	111822025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.6	chr10	+	4195	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	105	723	-6	-723	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAGATTTGTTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	111808673	111823614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.7	chr10	+	3401	8	NIC	ENSMUSG00000063334.17	novel	3451	9	NA	NA	-5	-794	intron_retention	FALSE	canonical	3	346	junction_4	33.8502102607041	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTATTTCTTTTAATT	NA	False	NA	-15	True	ATTAAA	-23	NA	111808674	111822005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813304_111814995_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.8	chr10	+	1532	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	112	3379	1	372	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAACAACAACAGAAAA	NA	False	NA	NA	False	NA	NA	NA	111808680	111820958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.3743.9	chr10	+	3349	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	114	1560	3	-22	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAATCTAGAAA	NA	False	NA	NA	False	NA	NA	NA	111808682	111822777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ES.37430.1	chrX	+	6393	1	Antisense	novelGene_ENSMUSG00000051220.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101188465	101194858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_101188500_101194900
ES.37431.1	chrX	-	4073	3	NNC	ENSMUSG00000051220.3	novel	5302	2	NA	NA	-13	12712	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	124.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTAGACCATTT	NA	False	NA	NA	False	NA	NA	NA	101200710	101172609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101172617_101186570_101190440_101200513
ES.37431.10	chrX	-	3844	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	55	1403	55	-1403	multi-exon	FALSE	canonical	3	249	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTCCCTTGAATATTT	NA	False	NA	NA	False	TATAAA	-14	NA	101200642	101186724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101190440_101200513
ES.37431.11	chrX	-	3414	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	5	1883	5	-1883	multi-exon	FALSE	canonical	3	249	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATATGGAGGAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	101200692	101187204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101190440_101200513
ES.37431.12	chrX	-	172	1	Intergenic	novelGene_30650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	101196303	101196131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101196100_101196300
ES.37431.2	chrX	-	5728	3	NNC	ENSMUSG00000051220.3	novel	5302	2	NA	NA	-3	809	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.5	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTGTAAATATCTGTA	NA	False	NA	NA	False	NA	NA	NA	101200700	101184512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101185265_101185650_101190440_101200513
ES.37431.3	chrX	-	5330	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-23	-5	-23	5	multi-exon	FALSE	canonical	3	249	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGTTTGTTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	101200720	101185316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101190440_101200513
ES.37431.4	chrX	-	4091	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	-27	1238	-27	-1238	multi-exon	FALSE	canonical	3	249	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCATTCATTTTCTTT	NA	False	NA	0	True	ATTAAA	-18	NA	101200724	101186559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101190440_101200513
ES.37431.5	chrX	-	4008	2	NNC	ENSMUSG00000051220.3	novel	5302	2	NA	NA	46	-1241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200651	101186562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101190433_101200513
ES.37431.6	chrX	-	4106	2	NNC	ENSMUSG00000051220.3	novel	5302	2	NA	NA	94	-1241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200603	101186562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101190440_101200374
ES.37432.1	chrX	-	155	1	Intergenic	novelGene_30651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	4952	False	NA	NA	False	NA	NA	NA	101208556	101208401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101208400_101208600
ES.37433.1	chrX	+	2361	1	Intergenic	novelGene_30652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	101217948	101220309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101217900_101220300
ES.37434.1	chrX	-	1592	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	12	-629	12	629	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTATGTCCCAGCAGC	NA	False	NA	NA	False	AATAAA	-15	NA	101232988	101227917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ES.37434.10	chrX	-	636	6	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6497.58697979488	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230064_101231485_101231609_101231899_101231978_101232903
ES.37434.11	chrX	-	1262	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	2	225	junction_6	5957.81463476519	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232894	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232508
ES.37434.13	chrX	-	1273	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-2	intron_retention	FALSE	canonical	3	11043	junction_5	2068.48591970069	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ES.37434.15	chrX	-	896	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6040.96941493848	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232909
ES.37434.16	chrX	-	837	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_5	5946.87781996196	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231544_101231899_101231978_101232903
ES.37434.17	chrX	-	1640	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	10	-2	intron_retention	FALSE	canonical	3	11043	junction_5	2046.70920259816	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232932	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ES.37434.18	chrX	-	2523	4	ISM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	35	3	-23	-3	intron_retention	FALSE	canonical	3	15566	junction_3	654.174798250947	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTGGTTTGCTGTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	101232965	101228549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960
ES.37434.19	chrX	-	1932	4	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-3	intron_retention	FALSE	canonical	3	11043	junction_3	2540.20327270608	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTGGTTTGCTGTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	101232929	101228549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101229267_101230001_101230174_101230960_101231978_101232903
ES.37434.2	chrX	-	1006	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	-30	-1	-30	1	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGCTGTTGCTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	101233030	101228545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ES.37434.20	chrX	-	959	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6040.96941493848	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTGGTTTGCTGTTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	101233019	101228549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232935
ES.37434.21	chrX	-	931	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5950.03962638532	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTACTTTTGGTTTGCTG	NA	False	NA	NA	False	ATTAAA	-11	NA	101232930	101228553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231642_101231899_101231978_101232903
ES.37434.22	chrX	-	868	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	5947.93173202996	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTACTTTTGGTTTGCTG	NA	False	NA	NA	False	ATTAAA	-11	NA	101232930	101228553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231579_101231899_101231978_101232903
ES.37434.23	chrX	-	890	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6005.39401057268	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTACTTTTGGTTTGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	101232930	101228554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230967_101231059_101231427_101231609_101231899_101231978_101232903
ES.37434.24	chrX	-	943	8	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7252.7995580032	1751	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTACTTTTGGTTTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	101232929	101228555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232172_101232221_101232903
ES.37434.3	chrX	-	1600	5	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-23	0	intron_retention	FALSE	canonical	3	11043	junction_4	2425.28457093183	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232965	101228546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231978_101232903
ES.37434.4	chrX	-	4413	1	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-17	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1751	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232959	101228546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228500_101233000
ES.37434.5	chrX	-	756	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	6425.44375432546	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232964	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231899_101231978_101232903
ES.37434.6	chrX	-	1928	5	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	13	-2	intron_retention	FALSE	canonical	3	11043	junction_4	2172.09902801415	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232929	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101230174_101230960_101231059_101231427_101231978_101232903
ES.37434.7	chrX	-	3478	2	FSM	ENSMUSG00000031320.10	ENSMUST00000152739.2	784	2	-10	-2684	-10	-2	multi-exon	FALSE	canonical	3	11043	junction_1	0	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232952	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101231978_101232903
ES.37434.8	chrX	-	1196	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	10	-2	intron_retention	FALSE	canonical	3	11043	junction_5	2174.6576190288	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232932	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231978_101232903
ES.37434.9	chrX	-	2385	4	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	11043	junction_3	2785.17771226342	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGGTTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	101232965	101228548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101228738_101229108_101229267_101230001_101231978_101232903
ES.37435.1	chrX	+	174	1	Intergenic	novelGene_30653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACATTGTCCAT	NA	False	NA	NA	False	NA	NA	NA	101240836	101241010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101240800_101241000
ES.37436.1	chrX	-	176	1	Intergenic	novelGene_30654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	101246119	101245943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101245900_101246100
ES.37437.1	chrX	-	179	1	Intergenic	novelGene_30655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	101247775	101247596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101247600_101247800
ES.37438.1	chrX	-	217	1	Intergenic	novelGene_30656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAATCAAGATCAGATAA	NA	False	NA	NA	False	NA	NA	NA	101248184	101247967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101248000_101248200
ES.37439.1	chrX	+	171	1	Intergenic	novelGene_30657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAAAAAAGTCTAGC	5972	False	NA	NA	False	NA	NA	NA	101248708	101248879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101248700_101248900
ES.3744.1	chr10	+	2788	17	NIC	ENSMUSG00000035694.16	novel	2838	18	NA	NA	1	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.34483967445938	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGTTTAATGGCTTC	2747	False	NA	NA	False	AATAAA	-25	NA	111999526	112052465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_111999594_112001574_112001689_112013648_112013695_112013787_112013914_112015261_112015421_112018310_112018425_112018909_112018978_112026856_112026977_112030832_112030908_112031612_112031709_112031797_112031892_112035546_112035666_112036586_112036667_112039784_112039940_112044182_112044309_112047001_112047099_112051333
ES.3744.2	chr10	+	2909	18	NNC	ENSMUSG00000035694.16	novel	2838	18	NA	NA	1216	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.27797417543532	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACCCTTTTTGGAACAA	7183	False	NA	NA	False	AATAAA	-15	NA	112009660	112052417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_112009809_112011104_112011257_112011455_112011506_112013648_112013695_112013787_112013914_112015261_112015421_112018310_112018425_112018909_112018978_112026856_112026977_112030832_112030908_112031612_112031709_112031797_112031892_112035546_112035666_112036586_112036667_112039784_112039940_112044182_112044309_112047001_112047099_112051333
ES.37440.1	chrX	+	352	1	Intergenic	novelGene_30665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2393	False	NA	NA	False	NA	NA	NA	101269287	101269639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101269300_101269600
ES.37440.2	chrX	+	158	1	Intergenic	novelGene_30664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2393	False	NA	NA	False	NA	NA	NA	101269287	101269445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101269300_101269400
ES.37441.1	chrX	-	490	1	Intergenic	novelGene_30658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTCCCAACAA	9543	False	NA	NA	False	GGGGCT	-23	NA	101258680	101258190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101258200_101258700
ES.37441.2	chrX	-	252	1	Intergenic	novelGene_30659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAGTTTAAGCAGTTT	9542	False	NA	NA	False	NA	NA	NA	101258681	101258429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101258400_101258700
ES.37441.3	chrX	-	172	2	Intergenic	novelGene_30660	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	101277903	101258509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101258631_101277852
ES.37441.4	chrX	-	183	1	Intergenic	novelGene_30661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAACCAAAAAACAA	9130	False	NA	NA	False	NA	NA	NA	101259093	101258910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101258900_101259100
ES.37441.5	chrX	-	174	1	Intergenic	novelGene_30662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCTGAGGAGTGAACAGA	4663	False	NA	0	True	NA	NA	NA	101263560	101263386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101263400_101263600
ES.37441.6	chrX	-	180	1	Intergenic	novelGene_30663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAATAAATGTTAAA	5498	False	NA	NA	False	NA	NA	NA	101268454	101268274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101268300_101268500
ES.37441.7	chrX	-	205	1	Intergenic	novelGene_30666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGACACAAGACA	NA	False	NA	NA	False	NA	NA	NA	101277904	101277699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101277700_101277900
ES.37442.1	chrX	-	181	1	Intergenic	novelGene_30667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAGAACAG	NA	False	NA	NA	False	NA	NA	NA	101284411	101284230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101284200_101284400
ES.37443.1	chrX	-	877	3	FSM	ENSMUSG00000051159.17	ENSMUST00000134887.8	607	3	61	-331	61	-2	multi-exon	FALSE	canonical	3	12	junction_2	97.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGCCTGGGTGTGTTC	NA	False	NA	-2	True	AATAAA	-18	NA	101294491	101290988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101291615_101292168_101292294_101294365
ES.37443.2	chrX	-	947	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	-50	4	-50	-4	multi-exon	FALSE	canonical	3	131	junction_2	38	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGCCTGGGTGTGT	NA	False	NA	-4	True	AATAAA	-16	NA	101295837	101290990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101291615_101292168_101292294_101295639
ES.37443.3	chrX	-	1050	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	59	-19	59	-4	multi-exon	FALSE	canonical	3	50	junction_2	78.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGCCTGGGTGTGT	NA	False	NA	-4	True	AATAAA	-16	NA	101295399	101290990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101291615_101292168_101292294_101295098
ES.37444.1	chrX	-	141	1	Intergenic	novelGene_30668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101298501	101298360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101298400_101298500
ES.37445.1	chrX	-	1657	11	NNC	ENSMUSG00000067567.13	novel	1936	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.050143953537	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548728	101328244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101328775_101338258_101338323_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37445.2	chrX	-	1722	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	214	0	1	0	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548751	101328244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37445.3	chrX	-	3658	5	Intergenic	novelGene_30669	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-37	NA	101489658	101422650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101423763_101429599_101429799_101438168_101438260_101485499_101485654_101487556
ES.37445.4	chrX	-	1645	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	27	13584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.6100451236412	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGGAATAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	101548725	101435668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472368_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37445.5	chrX	-	1498	8	FSM	ENSMUSG00000067567.13	ENSMUST00000148481.8	2183	8	3	682	3	-682	multi-exon	FALSE	canonical	2	2	junction_1	23.6392962359418	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACATGTGTAACAGAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101548749	101451889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101452572_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37445.6	chrX	-	2410	5	NNC	ENSMUSG00000067567.13	novel	591	3	NA	NA	24	6004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.8998327754521	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGATATGAGAAAATGT	NA	False	NA	NA	False	NA	NA	NA	101548728	101535757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101537673_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37445.7	chrX	-	805	5	NNC	ENSMUSG00000067567.13	novel	591	3	NA	NA	27	4402	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.8998327754521	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTGCACTGTAGTATT	NA	False	NA	NA	False	TATAAA	-14	NA	101548725	101537359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101537673_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ES.37446.1	chrX	+	202	1	Intergenic	novelGene_30670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTGCTCATAAAACATT	NA	False	NA	NA	False	NA	NA	NA	101629344	101629546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_101629300_101629500
ES.37447.1	chrX	-	6089	32	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	10	23	combination_of_known_splicesites	TRUE	canonical	1	6	junction_5	13.5917891600127	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATCTGGTTTGTGACTG	NA	False	NA	NA	False	AATAAA	-39	NA	101687842	101557557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.10	chrX	-	5918	32	NNC	ENSMUSG00000034055.17	novel	5938	32	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	14.0844782869663	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATGTCTGGTGTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	101687843	101557585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101603176_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.11	chrX	-	5950	32	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	7	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.6597210640311	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGACTATGTCTGGT	NA	False	NA	NA	False	AATAAA	-5	NA	101687845	101557591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560476_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.12	chrX	-	5991	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	16	108	16	-108	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCGTTTTGTTCATT	NA	False	NA	NA	False	TTTAAA	-19	NA	101687836	101557688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.13	chrX	-	4053	26	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	28315	897	28315	-897	3prime_fragment	FALSE	canonical	3	40	junction_24	9.71300159579931	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGATCTGTCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	101659537	101558477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516
ES.37447.14	chrX	-	4754	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-21	1382	-21	-1382	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGAATTTCTGTGTTA	NA	False	NA	-7	True	ATTAAA	-21	NA	101687873	101558962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.15	chrX	-	4599	32	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-17	-1384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.0540607758543	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAAGAATTTCTGTGT	NA	False	NA	-9	True	ATTAAA	-19	NA	101687869	101558964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560476_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665019_101669189_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.17	chrX	-	4693	32	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-6	-1389	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	13.5917891600127	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGTTTAAGAATTTC	NA	False	NA	-14	True	ATTAAA	-14	NA	101687858	101558969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.18	chrX	-	3589	25	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	35158	-1390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.1107223458616	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAGTTTAAGAATTT	NA	False	NA	-15	True	ATTAAA	-13	NA	101652694	101558970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101581471_101581652_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647
ES.37447.2	chrX	-	6158	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-27	-16	-27	16	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAAGCTTATCTGGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	101687879	101557564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.20	chrX	-	4439	30	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	10	-1390	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.6173984436338	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAGTTTAAGAATTT	NA	False	NA	-15	True	ATTAAA	-13	NA	101687842	101558970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.21	chrX	-	4815	33	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-2	-1392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	19.3728829488541	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGGAAGTTTAAGAAT	NA	False	NA	-17	True	ATTAAA	-11	NA	101687854	101558972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600697_101600879_101603170_101603341_101612895_101612979_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661104_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.22	chrX	-	4622	31	FSM	ENSMUSG00000034055.17	ENSMUST00000119229.8	6025	31	11	1392	11	-1392	multi-exon	FALSE	canonical	0	0	junction_4	14.5083883782222	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGGAAGTTTAAGAAT	NA	False	NA	-17	True	ATTAAA	-11	NA	101687841	101558972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.23	chrX	-	4520	33	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	14	-1392	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_32	13.9278273610783	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGGAAGTTTAAGAAT	NA	False	NA	-17	True	ATTAAA	-11	NA	101687838	101558972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687641
ES.37447.24	chrX	-	4510	32	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	30	-1392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.2563083437656	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGGAAGTTTAAGAAT	NA	False	NA	-17	True	ATTAAA	-11	NA	101687822	101558972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560476_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661104_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.26	chrX	-	4971	5	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	112484	1392	112484	-1392	3prime_fragment	FALSE	canonical	3	45	junction_2	14.972892172189	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGGAAGTTTAAGAAT	NA	False	NA	-17	True	ATTAAA	-11	NA	101575368	101558972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672
ES.37447.27	chrX	-	4435	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-21	1701	-21	-1701	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGTTTTCTTATTT	NA	False	NA	NA	False	TTTAAA	-37	NA	101687873	101559281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.28	chrX	-	4247	28	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	310	16942	310	-16942	5prime_fragment	FALSE	canonical	3	40	junction_19	9.4058033044748	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGCTAACAATGACTGG	NA	False	NA	NA	False	AATATA	-17	NA	101687542	101574522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.29	chrX	-	3558	28	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	-35	17976	-35	-17976	5prime_fragment	FALSE	canonical	3	40	junction_19	9.4058033044748	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTTGTCTGTCTCAACT	NA	False	NA	NA	False	NA	NA	NA	101687887	101575556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.3	chrX	-	5847	31	NIC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-9	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	17.0626297308865	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAAAGCTTATCTGGTT	NA	False	NA	NA	False	AATAAA	-31	NA	101687861	101557565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.30	chrX	-	2348	15	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-2	-30537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.527383822849	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTACCTTTTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	101687854	101628921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101629338_101629533_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.31	chrX	-	2775	10	ISM	ENSMUSG00000034055.17	ENSMUST00000142534.2	2799	21	4	52847	4	-52847	5prime_fragment	FALSE	canonical	3	40	junction_1	11.6714276000077	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTTCCTAAAATT	NA	False	NA	NA	False	NA	NA	NA	101687848	101651231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.32	chrX	-	3029	5	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	305	-77115	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9313756564431	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAATTTCTTTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	101687547	101675499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101678058_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.4	chrX	-	6128	33	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	14.142135623731	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTGTTACTGCAC	NA	False	NA	NA	False	AATAAA	-15	NA	101687854	101557581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659504_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ES.37447.5	chrX	-	6622	5	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	112222	3	112222	-3	3prime_fragment	FALSE	canonical	3	45	junction_2	14.972892172189	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	AATAAA	-13	NA	101575630	101557583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672
ES.37447.6	chrX	-	4284	4	NNC	ENSMUSG00000034055.17	novel	6025	31	NA	NA	121594	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.0228681265345	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	AATAAA	-13	NA	101566258	101557583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560476_101561048_101561103_101564359
ES.37447.8	chrX	-	5822	4	ISM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	120164	3	120164	-3	3prime_fragment	FALSE	canonical	3	45	junction_2	17.2497987105808	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	AATAAA	-13	NA	101567688	101557583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359
ES.37447.9	chrX	-	5932	33	NNC	ENSMUSG00000034055.17	novel	6115	33	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_32	13.9278273610783	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTCTGGTGTTACTGC	NA	False	NA	NA	False	AATAAA	-13	NA	101687861	101557583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687641
ES.37448.1	chrX	-	509	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	-165	-7	-165	7	multi-exon	FALSE	canonical	3	77	junction_2	7	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTGTGTGAAATTTC	3462	False	NA	NA	False	AATAAA	-23	NA	101730743	101729890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101730044_101730198_101730354_101730542
ES.37449.1	chrX	-	412	3	FSM	ENSMUSG00000079479.3	ENSMUST00000113610.3	420	3	2	6	2	-6	multi-exon	FALSE	canonical	3	12	junction_2	3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTGACTTCGTG	NA	False	NA	NA	False	AATAAA	-16	NA	101751239	101750501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101750648_101750793_101750958_101751137
ES.3745.1	chr10	+	3197	1	NIC	ENSMUSG00000035681.8	novel	5046	5	NA	NA	6734	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCTATGTGATTAAATGA	NA	False	NA	NA	False	AATAAA	-27	NA	112298981	112302178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_112299000_112302200
ES.37450.1	chrX	+	1903	7	NNC	ENSMUSG00000073027.11	novel	1200	7	NA	NA	-122	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.5723301886761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTGAGTTGTTTGT	3742	False	NA	NA	False	AATAAA	-18	NA	101751348	101758954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101751533_101754965_101755124_101755540_101755600_101755900_101756038_101756392_101756896_101757072_101757251_101758270
ES.37450.2	chrX	+	1347	7	FSM	ENSMUSG00000073027.11	ENSMUST00000101324.9	1200	7	-12	-135	-12	135	multi-exon	FALSE	canonical	0	0	junction_4	1.5723301886761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAAAAATGTGAGTTGT	3852	False	NA	NA	False	AATAAA	-14	NA	101751458	101758950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_101751533_101754965_101755124_101755540_101755600_101755900_101756038_101756834_101756896_101757072_101757251_101758270
ES.37451.1	chrX	+	3141	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-24	8	intron_retention	FALSE	canonical	3	157	junction_4	15.6894869259642	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846544	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.10	chrX	+	1399	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	30	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	52.0670682085782	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846598	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101846761_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.11	chrX	+	1496	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	36	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.0263112349928	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846604	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846789_101848252_101848480_101848598_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.12	chrX	+	3337	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	41	4	intron_retention	FALSE	canonical	3	75	junction_1	45.4779067240347	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGGTCTTCACTGT	NA	False	NA	NA	False	AATAAA	-16	NA	101846609	101853552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101846761_101846861_101848480_101848622_101849156_101849476_101849614_101850489_101850871_101853035
ES.37451.13	chrX	+	3235	3	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	41	6	intron_retention	FALSE	canonical	3	35	junction_1	84.5	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846609	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101846761_101848305_101850871_101853035
ES.37451.14	chrX	+	1336	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.0263112349928	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101846618	101853550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846789_101848252_101848480_101848740_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.15	chrX	+	3231	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	57	0	intron_retention	FALSE	canonical	3	157	junction_4	16.4560019445794	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101846625	101853548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101848480_101848622_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.16	chrX	+	2919	4	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	59	1	intron_retention	FALSE	canonical	3	57	junction_1	64.053796834293	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGCCCAGGTCTTCAC	NA	False	NA	NA	False	AATAAA	-13	NA	101846627	101853549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846789_101848305_101849156_101849476_101850871_101853035
ES.37451.18	chrX	+	4756	2	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	62	3	intron_retention	FALSE	canonical	3	204	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCCAGGTCTTCACTG	NA	False	NA	NA	False	AATAAA	-15	NA	101846630	101853551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101850871_101853035
ES.37451.19	chrX	+	1601	9	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	69	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.1257197656963	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846637	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846761_101846861_101847052_101848252_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.2	chrX	+	3965	3	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-24	2	intron_retention	FALSE	canonical	3	167	junction_1	18.5	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101846544	101853550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101849614_101850489_101850871_101853035
ES.37451.20	chrX	+	1382	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	75	8	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	44.698993277254	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846643	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846789_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.21	chrX	+	1430	8	NNC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	80	8	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	56.4623768539724	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846648	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_101846789_101848252_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.22	chrX	+	1640	8	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	81	9	intron_retention	FALSE	canonical	0	0	junction_1	63.9495974999699	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCTTCACTGTAACTG	NA	False	NA	NA	False	AATAAA	-21	NA	101846649	101853557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.3	chrX	+	3638	4	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-12	8	intron_retention	FALSE	canonical	3	167	junction_2	15.5134350376268	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846556	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101849156_101849476_101849614_101850489_101850871_101853035
ES.37451.4	chrX	+	3155	5	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-8	8	intron_retention	FALSE	canonical	0	0	junction_2	81.7201780467958	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101846560	101853556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101846761_101846861_101847052_101848305_101849156_101849476_101850871_101853035
ES.37451.5	chrX	+	4507	3	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-7	6	intron_retention	FALSE	canonical	3	178	junction_1	13	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846561	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101849156_101849476_101850871_101853035
ES.37451.6	chrX	+	3433	5	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	157	junction_3	17.5285481429581	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101846566	101853548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37451.7	chrX	+	4354	4	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	2	6	intron_retention	FALSE	canonical	3	175	junction_2	11.8415464455544	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846570	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101848480_101848622_101848775_101849096_101850871_101853035
ES.37451.8	chrX	+	3152	6	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	7	6	intron_retention	FALSE	canonical	3	167	junction_4	12.8156154748806	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101846575	101853554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850871_101853035
ES.37451.9	chrX	+	2958	7	NIC	ENSMUSG00000067562.12	novel	1611	9	NA	NA	15	7	intron_retention	FALSE	canonical	3	157	junction_5	15.0959891656323	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGTCTTCACTGTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	101846583	101853555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ES.37452.1	chrX	-	2033	7	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	52	9	intron_retention	FALSE	canonical	0	0	junction_5	70.6320670013903	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCTTCACTGTAACTG	NA	False	NA	NA	False	AATAAA	-21	NA	101898170	101891235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101896486_101897739_101897930_101898030
ES.37452.10	chrX	-	3323	6	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	58	7	intron_retention	FALSE	canonical	3	77	junction_5	44.3621460256377	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGTCTTCACTGTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	101898164	101891237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894302_101895177_101895315_101895635_101896169_101896311_101897930_101898030
ES.37452.11	chrX	-	1431	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	50	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	63.1525525846674	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGTCTTCACTGTAAC	NA	False	NA	NA	False	AATAAA	-19	NA	101898172	101891237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896539_101898030
ES.37452.12	chrX	-	1506	9	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	105	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	78.5078618674589	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101898117	101891238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896022_101896169_101896311_101896486_101897739_101897930_101898030
ES.37452.13	chrX	-	1497	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-24	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.8378046781251	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGGTCTTCACTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	101898246	101891238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896504_101898002
ES.37452.14	chrX	-	4026	5	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	7	4	intron_retention	FALSE	canonical	3	176	junction_3	10.1827059272082	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGGTCTTCACTGT	NA	False	NA	NA	False	AATAAA	-16	NA	101898215	101891240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101895315_101895635_101895695_101896016_101896169_101896311
ES.37452.15	chrX	-	3181	6	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-24	4	intron_retention	FALSE	canonical	3	169	junction_2	11.4262854856686	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCAGGTCTTCACTGT	NA	False	NA	NA	False	AATAAA	-16	NA	101898246	101891240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311
ES.37452.16	chrX	-	4488	3	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	8	2	intron_retention	FALSE	canonical	3	181	junction_2	11	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101898214	101891242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101895315_101895635
ES.37452.18	chrX	-	1317	7	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.2424355453068	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101898172	101891242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895635_101895695_101896016_101896169_101896311_101896539_101898002
ES.37452.19	chrX	-	2480	6	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-14	2	intron_retention	FALSE	canonical	1	8	junction_5	70.6218096624549	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCCCAGGTCTTCACT	NA	False	NA	NA	False	AATAAA	-14	NA	101898236	101891242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894302_101895177_101895315_101895635_101895695_101896016_101896486_101897317
ES.37452.20	chrX	-	3538	5	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-20	1	intron_retention	FALSE	canonical	3	77	junction_4	48.049453690963	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGCCCAGGTCTTCAC	NA	False	NA	NA	False	AATAAA	-13	NA	101898242	101891243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894302_101895177_101895315_101895635_101897930_101898030
ES.37452.21	chrX	-	4170	4	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	176	junction_3	11.7284080571728	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898220	101891244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101895315_101895635_101895695_101896016
ES.37452.22	chrX	-	1642	9	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	64.8072864344743	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898196	101891244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896539_101897735_101897930_101898030
ES.37452.24	chrX	-	3235	5	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	61	0	intron_retention	FALSE	canonical	3	169	junction_2	12.7156399760295	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898161	101891244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894302_101895177_101895315_101895635_101895695_101896016
ES.37452.25	chrX	-	3025	7	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-18	-1	intron_retention	FALSE	canonical	3	77	junction_6	39.8274054166503	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACACTGCCCAGGTCTTC	NA	False	NA	NA	False	AATAAA	-11	NA	101898240	101891245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101897930_101898030
ES.37452.3	chrX	-	2998	7	ISM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	-24	-8	-24	8	intron_retention	FALSE	canonical	3	158	junction_2	13.9363633069113	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898246	101891236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311
ES.37452.4	chrX	-	1643	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	-24	-8	-24	8	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898246	101891236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
ES.37452.6	chrX	-	1477	8	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	-20	8	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_7	44.1518714790442	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898242	101891236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898002
ES.37452.7	chrX	-	1400	8	NIC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	29	8	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	51.90218429598	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898193	101891236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101898030
ES.37452.8	chrX	-	1574	9	NNC	ENSMUSG00000067561.13	novel	1611	9	NA	NA	105	8	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_7	61.2510203996635	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTCTTCACTGTAACT	NA	False	NA	NA	False	AATAAA	-20	NA	101898117	101891236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897679_101897930_101898030
ES.37453.1	chrX	-	2129	1	Intergenic	novelGene_30671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCATGGACTCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	101977782	101975653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_101975700_101977800
ES.37454.1	chrX	+	3061	2	Genic_Genomic	ENSMUSG00000084842.4	novel	690	1	NA	NA	-641	1815	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTCCTTTGGCTGT	5817	False	NA	1	True	ATTAAA	-10	NA	102056662	102059808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_102057417_102057501
ES.37454.2	chrX	+	3135	1	FSM	ENSMUSG00000084842.4	ENSMUST00000124538.2	690	1	-630	-1815	-630	1815	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTCCTTTGGCTGT	5828	False	NA	1	True	ATTAAA	-10	NA	102056673	102059808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102056700_102059800
ES.37455.1	chrX	-	3581	1	FSM	ENSMUSG00000086524.4	ENSMUST00000128361.2	513	1	408	-3476	408	3476	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAAGTTTCAAAAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	102110378	102106797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102106800_102110400
ES.37455.2	chrX	-	3118	1	FSM	ENSMUSG00000086524.4	ENSMUST00000128361.2	513	1	-685	-1920	-685	1920	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTGATTGTGAATTT	NA	False	NA	NA	False	ATTAAA	-10	NA	102111471	102108353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102108400_102111500
ES.37456.1	chrX	-	825	1	Intergenic	novelGene_30672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATAATTGGTCTTTTC	3592	False	NA	NA	False	NA	NA	NA	102153618	102152793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102152800_102153600
ES.37457.1	chrX	+	157	1	Intergenic	novelGene_30673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	102182376	102182533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102182400_102182500
ES.37458.1	chrX	-	193	2	Intergenic	novelGene_30674	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCATGCCAAGAGCTACT	NA	False	NA	NA	False	NA	NA	NA	102190969	102190717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102190753_102190811
ES.37459.1	chrX	-	1426	1	Genic_Genomic	ENSMUSG00000048949.9	novel	NA	NA	NA	NA	1117	245	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAATAAACAAC	NA	False	NA	NA	False	NA	NA	NA	102207896	102206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_102206500_102207900
ES.3746.1	chr10	-	175	1	Intergenic	novelGene_2849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAGAGATAATGTG	NA	False	NA	NA	False	NA	NA	NA	112613663	112613488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_112613500_112613700
ES.37460.1	chrX	+	1758	2	Intergenic	novelGene_30679	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	102269524	102286060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102271169_102285946
ES.37460.2	chrX	+	181	1	Intergenic	novelGene_30680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACTGAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	102285448	102285629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102285400_102285600
ES.37460.3	chrX	+	220	1	Intergenic	novelGene_30681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGTCAGGATCGTTAA	NA	False	NA	NA	False	NA	NA	NA	102285902	102286122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102285900_102286100
ES.37461.1	chrX	+	181	1	Intergenic	novelGene_30683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTCTTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	102288015	102288196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102288000_102288200
ES.37461.2	chrX	+	176	2	Antisense	novelGene_ENSMUSG00000031325.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTGCATGGTACT	NA	False	NA	NA	False	NA	NA	NA	102288019	102289890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_102288147_102289841
ES.37461.3	chrX	+	371	1	Intergenic	novelGene_30684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTCTTGGGAA	NA	False	NA	NA	False	NA	NA	NA	102288021	102288392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102288000_102288400
ES.37462.1	chrX	+	218	1	Intergenic	novelGene_30685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGCCTTCTGGAGTAA	NA	False	NA	NA	False	NA	NA	NA	102301001	102301219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102301000_102301200
ES.37463.1	chrX	+	180	1	Intergenic	novelGene_30686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTACTG	NA	False	NA	NA	False	NA	NA	NA	102315391	102315571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102315400_102315600
ES.37463.2	chrX	+	335	1	Intergenic	novelGene_30687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAAGTTGATTAAA	NA	False	NA	NA	False	NA	NA	NA	102315394	102315729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102315400_102315700
ES.37464.1	chrX	+	259	1	Intergenic	novelGene_30688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102333327	102333586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102333300_102333600
ES.37465.1	chrX	+	4544	1	Intergenic	novelGene_30689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTATGTCAGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	102333908	102338452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102333900_102338500
ES.37465.2	chrX	+	3485	2	Antisense	novelGene_ENSMUSG00000031325.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTATGTCAGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	102333908	102338452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_102337158_102338216
ES.37466.1	chrX	-	3822	1	FSM	ENSMUSG00000082229.2	ENSMUST00000121720.2	2465	1	-1380	23	-1380	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATGAATAAAAA	NA	False	NA	NA	False	AATACA	-24	NA	102231626	102227804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102227800_102231600
ES.37466.10	chrX	-	4788	5	NNC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-61	4175	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.68907359849138	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGAGTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	102355449	102269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_102271089_102271221_102273781_102276407_102276548_102277627_102277876_102355238
ES.37466.11	chrX	-	4755	4	NIC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-1	4175	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	5.71547606649408	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGAGTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	102296654	102269458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102273781_102276407_102276548_102277627_102277876_102296609
ES.37466.12	chrX	-	4817	3	NIC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-98	4174	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	5.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGAGTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	102355486	102269459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102273781_102277627_102277876_102355238
ES.37466.13	chrX	-	3370	1	NIC	ENSMUSG00000031325.16	novel	1113	6	NA	NA	22967	3317	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCAACTTTAAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	102273686	102270316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102270300_102273700
ES.37466.14	chrX	-	3105	5	NNC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-43	2873	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.25757228245687	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCACATCTACTGCTT	NA	False	NA	NA	False	NA	NA	NA	102355431	102270760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_102273138_102273633_102273781_102276407_102276548_102277627_102277876_102355238
ES.37466.15	chrX	-	3224	3	NIC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-65	2614	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	5.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCTTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	102355453	102271019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102273781_102277627_102277876_102355238
ES.37466.16	chrX	-	1947	4	FSM	ENSMUSG00000031325.16	ENSMUST00000127012.9	685	4	-43	-1219	-43	1219	multi-exon	FALSE	canonical	3	19	junction_2	0.816496580927726	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAATAAAAAC	NA	False	NA	NA	False	TATAAA	-16	NA	102355431	102272414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102273781_102276407_102276548_102277627_102277876_102355238
ES.37466.17	chrX	-	2316	3	NIC	ENSMUSG00000031325.16	novel	402	3	NA	NA	-145	319	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	5.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGATCAGTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	102296798	102274668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102276548_102277627_102277876_102296609
ES.37466.18	chrX	-	3240	1	Intergenic	novelGene_30682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATCAGAAGCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	102290927	102287687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102287700_102290900
ES.37466.19	chrX	-	2461	1	Genic_Genomic	ENSMUSG00000031325.16	novel	NA	NA	NA	NA	-43	-76432	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATCAAATGCTTTATGT	NA	False	NA	NA	False	AAAAAG	-14	NA	102355431	102352970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_102353000_102355400
ES.37466.2	chrX	-	2978	4	Fusion	ENSMUSG00000082229.2_ENSMUSG00000031325.16	novel	685	4	NA	NA	-43	-23	multi-exon	FALSE	canonical	0	0	junction_1	0	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATGAATAAAAA	NA	False	NA	NA	False	AATACA	-24	NA	102355431	102227804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_102230480_102322541_102322596_102325562_102325619_102355238
ES.37466.3	chrX	-	3006	3	Fusion	ENSMUSG00000082229.2_ENSMUSG00000031325.16	novel	402	3	NA	NA	18835	-23	multi-exon	FALSE	canonical	0	0	junction_1	9.5	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAATGAATAAAAA	NA	False	NA	NA	False	AATACA	-24	NA	102277818	102227804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_102230480_102276407_102276548_102277627
ES.37466.4	chrX	-	1268	1	Intergenic	novelGene_30675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATAAGAAATTAGAAAAAT	6294	False	NA	NA	False	NA	NA	NA	102245898	102244630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102244600_102245900
ES.37466.5	chrX	-	224	1	Intergenic	novelGene_30676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTTCAGCTGTGTTG	NA	False	NA	NA	False	NA	NA	NA	102261359	102261135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102261100_102261400
ES.37466.6	chrX	-	4900	1	Intergenic	novelGene_30677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAAACATAAGAAAAGGG	NA	False	NA	NA	False	AATAAA	-16	NA	102268093	102263193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102263200_102268100
ES.37466.7	chrX	-	1300	1	Intergenic	novelGene_30678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTATGGGATTAGTG	NA	False	NA	NA	False	NA	NA	NA	102266776	102265476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102265500_102266800
ES.37466.8	chrX	-	4919	4	FSM	ENSMUSG00000031325.16	ENSMUST00000127012.9	685	4	-51	-4183	-51	4183	multi-exon	FALSE	canonical	3	19	junction_2	0.816496580927726	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTTAAAGCATTTT	NA	False	NA	NA	False	NA	NA	NA	102355439	102269450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102273781_102276407_102276548_102277627_102277876_102355238
ES.37466.9	chrX	-	4175	4	NNC	ENSMUSG00000031325.16	novel	685	4	NA	NA	-11	4182	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1.69967317119759	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTTTTTAAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	102296664	102269451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_102273177_102273633_102273781_102277627_102277876_102296609
ES.37467.1	chrX	-	330	1	Intergenic	novelGene_30690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAATGGTGTCTGGGT	NA	False	NA	NA	False	NA	NA	NA	102356008	102355678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102355700_102356000
ES.37468.1	chrX	-	209	1	Intergenic	novelGene_30691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCAGGATTCTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	102364053	102363844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102363800_102364100
ES.37469.1	chrX	+	177	1	Intergenic	novelGene_30692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	102378212	102378389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102378200_102378400
ES.3747.1	chr10	-	4295	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-5	-724	1	724	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCTATTAAGTGAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	112764905	112760610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_112760600_112764900
ES.3747.2	chr10	-	3613	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-45	-2	-39	2	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTCATCTTCTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	112764945	112761332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_112761300_112764900
ES.3747.3	chr10	-	1959	2	Genic_Genomic	ENSMUSG00000074748.4	novel	458	2	NA	NA	-16	-8	multi-exon	FALSE	canonical	0	0	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATATTTTGACTCA	NA	False	NA	NA	False	AATAAA	-36	NA	112764922	112761342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_112762962_112764582
ES.3747.4	chr10	-	3499	2	NNC	ENSMUSG00000074748.4	novel	458	2	NA	NA	10	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATATTTTGACTCA	NA	False	NA	NA	False	AATAAA	-36	NA	112764890	112761342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_112763845_112763893
ES.3747.5	chr10	-	2356	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-31	1241	-25	1118	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTTTTTTTAAATTTAC	NA	False	NA	NA	False	NA	NA	NA	112764931	112762575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_112762600_112764900
ES.3747.6	chr10	-	735	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	-6	2837	0	-478	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112764906	112764171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_112764200_112764900
ES.37470.1	chrX	+	209	1	Intergenic	novelGene_30693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATCAGATCACAACCATC	NA	False	NA	NA	False	NA	NA	NA	102380024	102380233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102380000_102380200
ES.37471.1	chrX	+	3735	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	-50	3690	-50	-3690	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	NA	False	NA	46	True	NA	NA	NA	102400031	102436008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.10	chrX	+	176	1	Intergenic	novelGene_30695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102431061	102431237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102431100_102431200
ES.37471.11	chrX	+	4193	1	ISM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	33991	1433	33991	-1433	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGACTTTCAGTCTG	NA	False	NA	NA	False	ACTAAA	-37	NA	102434072	102438265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_102434100_102438300
ES.37471.12	chrX	+	133	1	Intergenic	novelGene_30696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102442789	102442922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102442800_102442900
ES.37471.13	chrX	+	1502	6	NIC	ENSMUSG00000031329.5	novel	812	7	NA	NA	-3	7	intron_retention	FALSE	canonical	3	22	junction_2	3.76297754444536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGTGTCACTGTT	NA	False	NA	8	True	AATAAA	-17	NA	102458069	102468193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_102458253_102459640_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
ES.37471.14	chrX	+	816	7	FSM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	3	-7	3	7	multi-exon	FALSE	canonical	3	20	junction_2	4.2687494916219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGTGTCACTGTT	NA	False	NA	8	True	AATAAA	-17	NA	102458075	102468193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
ES.37471.15	chrX	+	1944	4	ISM	ENSMUSG00000031329.5	ENSMUST00000033691.5	812	7	2357	0	2357	0	3prime_fragment	FALSE	canonical	3	24	junction_1	3.68178700572909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTGCGTTTCTGTGT	NA	False	NA	1	True	AATAAA	-10	NA	102460429	102468186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_102461897_102464105_102464207_102465593_102465653_102467869
ES.37471.2	chrX	+	7392	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	7	-24	7	24	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACCGTCTCAGTTTCCT	NA	False	NA	32	True	AATAAA	-42	NA	102400088	102439722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.3	chrX	+	2804	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	36	4535	36	-4535	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTGAATGTCAATCC	NA	False	NA	NA	False	AATATA	-29	NA	102400117	102435163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.4	chrX	+	988	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	54	6333	54	-6333	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTAAAAACATCAGTGC	NA	False	NA	NA	False	AATAAA	-28	NA	102400135	102433365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.5	chrX	+	1271	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	54	6050	54	-6050	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTGTAAATATTGTC	NA	False	NA	NA	False	GATAAA	-15	NA	102400135	102433648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.6	chrX	+	2160	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	71	5144	71	-5144	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTACTTTGATTCTACTA	NA	False	NA	NA	False	ATTAAA	-11	NA	102400152	102434554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.7	chrX	+	1376	12	Fusion	ENSMUSG00000031327.11_ENSMUSG00000031329.5	novel	812	7	NA	NA	115	5	multi-exon	FALSE	canonical	0	0	junction_5	11.8272692334563	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGTTTCTGTGTCACTG	NA	False	NA	6	True	AATAAA	-15	NA	102400196	102468191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102458140_102458253_102459640_102459677_102460356_102460394_102461814_102461897_102464105_102464207_102465593_102465653_102467869
ES.37471.8	chrX	+	2996	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	121	4258	121	-4258	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATAACTGTATTATTTT	NA	False	NA	NA	False	TTTAAA	-39	NA	102400202	102435440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ES.37471.9	chrX	+	3824	3	ISM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	30811	2894	30811	-2894	3prime_fragment	FALSE	canonical	3	39	junction_1	5.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCCATTTTTAATGAG	NA	False	NA	NA	False	ATTAAA	-16	NA	102430892	102436804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_102430918_102431592_102431653_102433065
ES.37472.1	chrX	-	1635	1	Intergenic	novelGene_30694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAACCCCCCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	102424714	102423079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102423100_102424700
ES.37473.1	chrX	-	175	1	Intergenic	novelGene_30697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACAGTTGTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	102467079	102466904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102466900_102467100
ES.37474.1	chrX	+	3928	2	NIC	ENSMUSG00000085715.3	novel	4306	4	NA	NA	-74	-14	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACACCTCCATTCCTG	NA	False	NA	NA	False	NA	NA	NA	102475048	102528549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_102475308_102524880
ES.37474.2	chrX	+	2236	1	Genic_Genomic	ENSMUSG00000085715.3	novel	NA	NA	NA	NA	-67	-48721	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	102475055	102477291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_102475100_102477300
ES.37474.3	chrX	+	2334	2	NIC	ENSMUSG00000085715.3	novel	4306	4	NA	NA	25	977	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACATGACGCGTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	102491352	102526989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_102491578_102524880
ES.37474.4	chrX	+	6467	2	Fusion	ENSMUSG00000085715.3_ENSMUSG00000083502.2	novel	3263	2	NA	NA	27	126	multi-exon	FALSE	canonical	1	1	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAACAAAACAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	102491354	102531120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_102491582_102524880
ES.37474.6	chrX	+	2034	1	NIC	ENSMUSG00000085715.3	novel	4306	4	NA	NA	402	-32249	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTCTGGTATCGTTGAA	NA	False	NA	NA	False	NA	NA	NA	102491729	102493763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_102491700_102493800
ES.37474.7	chrX	+	2275	2	FSM	ENSMUSG00000085715.3	ENSMUST00000211291.2	3263	2	1961	-973	1961	973	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAGTGACATGACGCG	NA	False	NA	NA	False	AATAAA	-14	NA	102493288	102526985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_102493459_102524880
ES.37474.8	chrX	+	7468	1	Antisense	novelGene_ENSMUSG00002076282.1_AS_novelGene_ENSMUSG00000086503.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	102509172	102516640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_102509200_102516600
ES.37475.1	chrX	-	3392	1	Intergenic	novelGene_30698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAAATCTTACCTGAA	8537	False	NA	NA	False	NA	NA	NA	102496865	102493473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102493500_102496900
ES.37476.1	chrX	-	2285	1	Genic_Genomic	ENSMUSG00000086503.5	novel	NA	NA	NA	NA	-1705	-22179	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCGGTCCATCGGGA	NA	False	NA	NA	False	NA	NA	NA	102528565	102526280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_102526300_102528600
ES.37477.1	chrX	+	191	1	Intergenic	novelGene_30699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAATTAAAGTTTCAT	NA	False	NA	NA	False	NA	NA	NA	102575719	102575910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102575700_102575900
ES.37478.1	chrX	+	228	1	Intergenic	novelGene_30700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAGCTCAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	102592676	102592904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102592700_102592900
ES.37479.1	chrX	+	229	1	Intergenic	novelGene_30701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102656900	102657129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102656900_102657100
ES.3748.1	chr10	-	165	1	Intergenic	novelGene_2850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATATGATCTTTCTT	NA	False	NA	-6	True	NA	NA	NA	112867656	112867491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_112867500_112867700
ES.37480.1	chrX	-	3756	11	NIC	ENSMUSG00000086370.10	novel	2313	12	NA	NA	-17	-321	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	1.42828568570857	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTGTTTATGTGTT	NA	False	NA	NA	False	AATGAA	-12	NA	102660486	102604833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102607574_102608135_102608179_102639536_102639614_102646647_102646696_102649063_102649226_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102658670_102658799_102660465
ES.37480.2	chrX	-	1417	12	NNC	ENSMUSG00000086370.10	novel	2313	12	NA	NA	-37	-796	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.37269717004923	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGATATGCACTCTCTAT	NA	False	NA	NA	False	GATAAA	-12	NA	102660506	102607298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_102607574_102608135_102608179_102639536_102639614_102646647_102646696_102649063_102649226_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102656628_102656735_102658670_102658799_102660465
ES.37480.3	chrX	-	2581	12	NIC	ENSMUSG00000086370.10	novel	2478	12	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	1.08330684434663	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAACATTTTGATGGT	NA	False	NA	NA	False	AATAAA	-25	NA	102660559	102613181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_102614482_102616105_102616168_102639536_102639614_102646647_102646696_102649063_102649226_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102656628_102656802_102658670_102658799_102660465
ES.37481.1	chrX	+	176	1	Intergenic	novelGene_30702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAACAAAAATCGA	NA	False	NA	NA	False	NA	NA	NA	102663051	102663227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102663100_102663200
ES.37482.1	chrX	+	176	1	Intergenic	novelGene_30703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTATATACTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	102671398	102671574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102671400_102671600
ES.37483.1	chrX	-	220	1	Intergenic	novelGene_30704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTGGATTGATCAT	NA	False	NA	NA	False	NA	NA	NA	102684253	102684033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102684000_102684300
ES.37484.1	chrX	-	214	1	Intergenic	novelGene_30705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAAAATTCACT	NA	False	NA	NA	False	NA	NA	NA	102714966	102714752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102714800_102715000
ES.37485.1	chrX	+	177	1	Intergenic	novelGene_30706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTCATTT	NA	False	NA	NA	False	NA	NA	NA	102722303	102722480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102722300_102722500
ES.37486.1	chrX	+	198	1	Intergenic	novelGene_30707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTCTTCTTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	102730936	102731134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102730900_102731100
ES.37487.1	chrX	-	177	1	Intergenic	novelGene_30708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAATAATACAGACT	NA	False	NA	NA	False	NA	NA	NA	102766962	102766785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_102766800_102767000
ES.37488.1	chrX	-	431	1	FSM	ENSMUSG00000083019.3	ENSMUST00000120787.2	396	1	190	-225	190	121	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAGAGAGAGTCG	NA	False	NA	NA	False	AATAAA	-13	NA	102806832	102806401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_102806400_102806800
ES.37489.1	chrX	+	174	1	Intergenic	novelGene_30709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	102919005	102919179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102919000_102919200
ES.3749.1	chr10	-	176	1	Intergenic	novelGene_2851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	113831169	113830993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_113831000_113831200
ES.37490.1	chrX	+	167	1	Intergenic	novelGene_30710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	102971592	102971759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_102971600_102971800
ES.37491.1	chrX	+	178	1	Intergenic	novelGene_30713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103015448	103015626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103015400_103015600
ES.37492.1	chrX	+	2205	1	Intergenic	novelGene_30714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCAGATCTGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	103016564	103018769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103016600_103018800
ES.37492.2	chrX	+	3262	2	Antisense	novelGene_ENSMUSG00000056537.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103017103	103020584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_103018556_103018774
ES.37492.3	chrX	+	5124	2	Antisense	novelGene_ENSMUSG00000056537.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCACTGAACATTTAAAAA	NA	False	NA	NA	False	AAGAAA	-45	NA	103017103	103022446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_103018556_103018774
ES.37493.1	chrX	-	7428	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	4	-3	4	3	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTTTCATCCTTGGG	2377	False	NA	2	True	AATAAA	-19	NA	103024886	103000765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.10	chrX	-	7347	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.5704660530147	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGCTTTTTCATCC	2414	False	NA	-3	True	AATAAA	-14	NA	103024849	103000770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103006607_103006645_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.12	chrX	-	7489	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.7278206230883	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGTGCTTTTTCATC	2393	False	NA	-4	True	AATAAA	-13	NA	103024870	103000771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103020915_103020989_103022878_103022941_103024668
ES.37493.13	chrX	-	6974	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.5775383893383	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGTGCTTTTTCATC	2377	False	NA	-4	True	AATAAA	-13	NA	103024886	103000771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103001073_103001530_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.14	chrX	-	7339	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	36	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.5775383893383	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATTTGTGCTTTTTCA	2409	False	NA	-6	True	AATAAA	-11	NA	103024854	103000773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103004061_103004119_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.15	chrX	-	7554	7	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	35	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	90.6925514520839	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATTTGTGCTTTTTCA	2408	False	NA	-6	True	AATAAA	-11	NA	103024855	103000773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103020915_103020989_103022109_103022202_103022878_103022941_103024678
ES.37493.17	chrX	-	5985	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	6	1438	6	-1438	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGCCACCCTTTAAAT	2379	False	NA	NA	False	AATAAA	-18	NA	103024884	103002206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.18	chrX	-	5876	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	18	1545	18	-1545	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTTTTTAAGTGTA	2391	False	NA	NA	False	AGTAAA	-11	NA	103024872	103002313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.19	chrX	-	5874	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	9	1546	9	-1546	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTTTTTAAGTGT	2382	False	NA	NA	False	AGTAAA	-10	NA	103024881	103002314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.2	chrX	-	7463	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	-23	-1	-23	1	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTTTCATCCTTG	2350	False	NA	0	True	AATAAA	-17	NA	103024913	103000767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.20	chrX	-	4290	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	6	3133	6	-3133	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTCCATTGTAGAGG	2379	False	NA	NA	False	AGTAAA	-25	NA	103024884	103003901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.21	chrX	-	3965	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	6	3458	6	-3458	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTCATGTTTTCTTC	2379	False	NA	NA	False	AGTAAA	-16	NA	103024884	103004226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.22	chrX	-	3966	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	6	3467	6	-3467	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTACATTCTTTCAT	2379	False	NA	NA	False	AGTAAA	-7	NA	103024884	103004235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.23	chrX	-	3543	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	26	3870	26	-3870	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTCATGTTGGGTTATT	2399	False	NA	NA	False	NA	NA	NA	103024864	103004638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.24	chrX	-	2289	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	6	-5217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.7278206230883	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTCATTGCTTTCTT	2379	False	NA	NA	False	TATAAA	-12	NA	103024884	103005985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103020915_103020989_103022878_103022941_103024668
ES.37493.25	chrX	-	2194	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	18	5217	18	-5217	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTCATTGCTTTCTT	2391	False	NA	NA	False	TATAAA	-12	NA	103024872	103005985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.26	chrX	-	2368	7	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	19	-5217	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	89.8123042795362	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTCATTGCTTTCTT	2392	False	NA	NA	False	TATAAA	-12	NA	103024871	103005985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103020915_103020989_103022109_103022202_103022878_103022941_103024668
ES.37493.27	chrX	-	2284	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	20	-5217	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	85.0858390097906	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTCATTGCTTTCTT	2393	False	NA	NA	False	TATAAA	-12	NA	103024870	103005985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024678
ES.37493.28	chrX	-	2216	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	4	5219	4	-5219	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGAGTCATTGCTTTC	2377	False	NA	NA	False	TATAAA	-10	NA	103024886	103005987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ES.37493.29	chrX	-	176	1	Intergenic	novelGene_30711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTAGGTAGCC	NA	False	NA	NA	False	NA	NA	NA	103011216	103011040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103011000_103011200
ES.37493.3	chrX	-	5500	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.5704660530147	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTTTTTCATCCTT	2391	False	NA	-1	True	AATAAA	-16	NA	103024872	103000768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103005100_103007010_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ES.37493.30	chrX	-	2388	1	Intergenic	novelGene_30712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	103014159	103011771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103011800_103014200
ES.37493.31	chrX	-	3195	1	NIC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	110	-185	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGCTGATATTTTTCAG	2483	False	NA	NA	False	NA	NA	NA	103024780	103021585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103021600_103024800
ES.37493.5	chrX	-	7484	5	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	-1574	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.3840030430502	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	799	False	NA	-2	True	AATAAA	-15	NA	103026464	103000769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103026196
ES.37493.6	chrX	-	7524	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	86.0729922798087	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	2379	False	NA	-2	True	AATAAA	-15	NA	103024884	103000769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024668
ES.37493.7	chrX	-	8789	2	NIC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	14176	-1	intron_retention	FALSE	canonical	3	200	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCTTTTTCATCCT	NA	False	NA	-2	True	AATAAA	-15	NA	103010714	103000769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103008941_103010096
ES.37493.8	chrX	-	7488	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.7571929413138	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGCTTTTTCATCC	2377	False	NA	-3	True	AATAAA	-14	NA	103024886	103000770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103015832_103015898_103022878_103022941_103024678
ES.37493.9	chrX	-	7543	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	85.0858390097906	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGCTTTTTCATCC	2349	False	NA	-3	True	AATAAA	-14	NA	103024914	103000770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024678
ES.37494.1	chrX	+	218	1	Intergenic	novelGene_30716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103228454	103228672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103228500_103228700
ES.37495.1	chrX	+	6399	1	Intergenic	novelGene_30717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	103234890	103241289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103234900_103241300
ES.37496.10	chrX	-	5142	7	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-367	2753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.8927197372091	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGAGTATAATGTG	NA	False	NA	NA	False	AATAAA	-6	NA	103245158	103124566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103152712_103152799_103244238_103244478_103245114
ES.37496.12	chrX	-	7415	4	NIC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-38	2753	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	10.6144555520604	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGAGTATAATGTG	NA	False	NA	NA	False	AATAAA	-6	NA	103244829	103124566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103126890_103127461_103131837_103132486_103132613_103244238
ES.37496.13	chrX	-	7941	3	FSM	ENSMUSG00000046449.16	ENSMUST00000118314.8	11476	3	-11	3546	-11	2734	multi-exon	FALSE	canonical	1	3	junction_2	11.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAATAAAGAAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	103244802	103124585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103131837_103132486_103132613_103244238
ES.37496.14	chrX	-	6966	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-585	2734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.91160935469109	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAATAAAGAAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	103245376	103124585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103126890_103127696_103131837_103132486_103132613_103143231_103143288_103244238_103244478_103245275
ES.37496.15	chrX	-	7928	4	FSM	ENSMUSG00000046449.16	ENSMUST00000056502.7	5211	4	16	-2733	-11	2733	multi-exon	FALSE	canonical	1	4	junction_3	9.03081145609604	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAGAAATAAAGAAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	103244734	103124586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103131837_103132486_103132613_103143231_103143288_103244238
ES.37496.16	chrX	-	6323	4	NNC	ENSMUSG00000046449.16	novel	5211	4	NA	NA	-351	1413	intron_retention	FALSE	canonical	1	3	junction_2	10.4029910228848	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCCTAAATGTTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	103245142	103125906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103131837_103132486_103132613_103244238_103244478_103245114
ES.37496.17	chrX	-	5916	4	NNC	ENSMUSG00000046449.16	novel	5211	4	NA	NA	-24	610	intron_retention	FALSE	canonical	0	0	junction_3	12.0277457017791	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAGTCTTTGAAATCA	NA	False	NA	NA	False	AAGAAA	-17	NA	103244815	103126709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103131837_103132486_103132613_103152712_103152799_103244238
ES.37496.18	chrX	-	179	1	Intergenic	novelGene_30715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGTTCCCTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	103155531	103155352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103155400_103155500
ES.37496.19	chrX	-	2631	1	Intergenic	novelGene_30718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTCGATGCATCAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	103244118	103241487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103241500_103244100
ES.37496.2	chrX	-	5113	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-411	2766	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	11.6275534829989	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGTTTTTATAAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	103245202	103124553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238_103244478_103245114
ES.37496.4	chrX	-	5049	7	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	86722	2764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.4286854583348	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGTGTTTTTATAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	103158001	103124555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103152712_103152799_103157878
ES.37496.5	chrX	-	7526	3	NNC	ENSMUSG00000046449.16	novel	11476	3	NA	NA	86725	2763	intron_retention	FALSE	canonical	0	0	junction_2	13	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGTGTTTTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	103157998	103124556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103131837_103132486_103132613_103157878
ES.37496.6	chrX	-	5533	4	NNC	ENSMUSG00000046449.16	novel	5211	4	NA	NA	305	2761	intron_retention	FALSE	canonical	1	3	junction_3	12.1928941054479	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAATGTGTTTTTATA	NA	False	NA	NA	False	AATAAA	-14	NA	103244418	103124558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103131837_103132486_103132613_103244238
ES.37496.7	chrX	-	5156	7	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-404	2760	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	10.5619863451699	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATAATGTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	103245195	103124559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103244238_103244478_103245114
ES.37496.8	chrX	-	5682	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-365	2753	intron_retention	FALSE	canonical	1	4	junction_4	10.9434912162436	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGAGTATAATGTG	NA	False	NA	NA	False	AATAAA	-6	NA	103245156	103124566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103131837_103132486_103132613_103143231_103143288_103244238_103244478_103245114
ES.37496.9	chrX	-	5193	8	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-362	2753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.1150943126367	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGAGTATAATGTG	NA	False	NA	NA	False	AATAAA	-6	NA	103245153	103124566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103143231_103143288_103152712_103152799_103244238_103244478_103245114
ES.37497.1	chrX	-	219	1	Intergenic	novelGene_30719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTATTTGGCTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	103262409	103262190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103262200_103262400
ES.37498.1	chrX	+	157	1	Intergenic	novelGene_30720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	103342538	103342695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103342500_103342700
ES.37499.1	chrX	+	178	1	Intergenic	novelGene_30722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATGTAAGA	NA	False	NA	NA	False	NA	NA	NA	103387125	103387303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103387100_103387300
ES.375.1	chr1	-	5613	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	-224	-4	-224	4	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTTTCCACAGATACT	9750	False	NA	45	True	AATAAA	-17	NA	43132113	43086375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.11	chr1	-	4983	11	NIC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	-108	-49	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	16.5529453572468	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	NA	False	NA	-8	True	ATTAAA	-16	NA	43131731	43086428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43114410_43115113_43131540
ES.375.12	chr1	-	4908	12	NNC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	22	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.7826141399614	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	NA	False	NA	-8	True	ATTAAA	-16	NA	43131585	43086428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43088996_43090841_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.13	chr1	-	7873	12	NIC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-27	-51	intron_retention	FALSE	canonical	3	11	junction_10	15.8677384641587	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTTTCTTGGGTCA	7741	False	NA	-10	True	ATTAAA	-14	NA	43137824	43086430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.14	chr1	-	4393	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	147	845	-119	-845	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCCGCTGTGTCCCAA	NA	False	NA	NA	False	AATAAA	-16	NA	43131742	43087224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.16	chr1	-	3631	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	259	1495	-7	-1495	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACTTGGGAAATTCAA	NA	False	NA	NA	False	NA	NA	NA	43131630	43087874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.17	chr1	-	3780	14	NNC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-6	-1928	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	19.873267108408	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAATCTGTTTAGAA	7762	False	NA	NA	False	TATAAA	-25	NA	43137803	43088307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43118886_43118987_43136011_43136210_43137429
ES.375.18	chr1	-	5398	6	NIC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	-374	-1931	intron_retention	FALSE	canonical	3	42	junction_2	3.54400902933387	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACATGGAAATCTGTTTA	NA	False	NA	NA	False	TATAAA	-22	NA	43100467	43088310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43098316_43099039
ES.375.19	chr1	-	4608	10	NNC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	-14786	-1936	intron_retention	FALSE	canonical	1	1	junction_6	16.7199149386459	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAGCACATGGAAATCT	NA	False	NA	NA	False	TATAAA	-17	NA	43114879	43088315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099401_43101676_43101760_43106633_43106789_43110620_43110816_43114410
ES.375.2	chr1	-	5659	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-71	19	-56	1	multi-exon	FALSE	canonical	3	11	junction_11	15.5393765068687	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGGTTTCCACAGAT	7712	False	NA	42	True	AATAAA	-14	NA	43137853	43086378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.20	chr1	-	3304	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-24	2327	-9	-2307	multi-exon	FALSE	canonical	3	11	junction_11	15.5393765068687	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTCTTTGTGTGGAT	7759	False	NA	NA	False	NA	NA	NA	43137806	43088686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.21	chr1	-	5013	12	NIC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-9	-2320	intron_retention	FALSE	canonical	3	11	junction_10	16.1260530439677	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTGACTGCTGATTGT	7759	False	NA	NA	False	NA	NA	NA	43137806	43088699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.22	chr1	-	4174	12	NNC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-9	-3157	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.0911147665326	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAATCTGGGTCCTGCT	7759	False	NA	NA	False	NA	NA	NA	43137806	43089536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095773_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.23	chr1	-	2602	11	ISM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	266	4239	0	3249	5prime_fragment	FALSE	canonical	3	38	junction_10	7.81280999384984	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTATTGATTGTTCCT	NA	False	NA	NA	False	TTTAAA	-40	NA	43131623	43090618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.24	chr1	-	5434	11	NIC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-35	3221	intron_retention	FALSE	canonical	3	11	junction_9	14.8579944810866	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGCCAGTTTTTAT	7733	False	NA	NA	False	TTTAAA	-12	NA	43137832	43090646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ES.375.25	chr1	-	3911	5	NNC	ENSMUSG00000070939.10	novel	785	4	NA	NA	-38	1314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.06828373317832	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTAAGTTTGCTAC	7730	False	NA	NA	False	NA	NA	NA	43137835	43112086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43115113_43115559_43115727_43118872_43118987_43136011_43136210_43137429
ES.375.26	chr1	-	1738	3	ISM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	-34	27600	-19	-318	5prime_fragment	FALSE	canonical	3	11	junction_1	0.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTAGGGCTCATTCTTGG	7749	False	NA	NA	False	NA	NA	NA	43137816	43113959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_43115113_43136011_43136210_43137429
ES.375.27	chr1	-	1257	2	FSM	ENSMUSG00000070939.10	ENSMUST00000187525.2	1795	2	-21	559	-21	-318	multi-exon	FALSE	canonical	3	38	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTAGGGCTCATTCTTGG	NA	False	NA	NA	False	NA	NA	NA	43131644	43113959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43115113_43131540
ES.375.28	chr1	-	139	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7925	False	NA	NA	False	NA	NA	NA	43133938	43133799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43133800_43133900
ES.375.3	chr1	-	5717	14	NNC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-49	-48	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	20.0186303759817	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCTTGGGTCATTT	7719	False	NA	-7	True	ATTAAA	-17	NA	43137846	43086427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43118872_43118987_43136011_43136210_43137429
ES.375.4	chr1	-	4879	12	NIC	ENSMUSG00000070939.10	novel	5607	13	NA	NA	-27	-48	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	18.2571168054977	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCTTGGGTCATTT	7741	False	NA	-7	True	ATTAAA	-17	NA	43137824	43086427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43136011_43136210_43137429
ES.375.5	chr1	-	5127	12	NNC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	-5	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.7191255828977	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCTTGGGTCATTT	NA	False	NA	-7	True	ATTAAA	-17	NA	43131612	43086427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131473
ES.375.6	chr1	-	6784	11	NIC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	-7	-48	intron_retention	FALSE	canonical	3	38	junction_10	7.81280999384984	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCTTGGGTCATTT	NA	False	NA	-7	True	ATTAAA	-17	NA	43131614	43086427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ES.375.8	chr1	-	7823	5	NIC	ENSMUSG00000070939.10	novel	5385	12	NA	NA	805	-49	intron_retention	FALSE	canonical	3	42	junction_1	3.90512483795333	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTTCTTGGGTCATT	NA	False	NA	-8	True	ATTAAA	-16	NA	43099288	43086428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43091152_43092570_43092731_43093678_43093826_43095771_43098316_43099039
ES.3750.1	chr10	-	192	1	Intergenic	novelGene_2852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGCATGATATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	114629435	114629243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_114629200_114629400
ES.37500.1	chrX	+	4755	1	Intergenic	novelGene_30723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103410783	103415538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103410800_103415500
ES.37501.1	chrX	-	6072	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	16	-421	16	421	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGATTGTTTCCATATTT	9877	False	NA	NA	False	ATTAAA	-26	NA	103457436	103323841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.10	chrX	-	5732	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-68	3	-58	-3	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	9984	False	NA	-5	True	AATAAA	-21	NA	103457520	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.11	chrX	-	1375	2	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	131256	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	NA	False	NA	-5	True	AATAAA	-21	NA	103326196	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103324738_103325293
ES.37501.12	chrX	-	5817	16	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	269	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	77.5334766407389	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	9440	False	NA	-5	True	AATAAA	-21	NA	103457183	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103456840
ES.37501.13	chrX	-	3719	4	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	119292	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.589693223434	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	NA	False	NA	-5	True	AATAAA	-21	NA	103338160	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327141_103327215_103327865_103334728_103334837_103338073
ES.37501.14	chrX	-	6170	10	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	109233	-3	intron_retention	FALSE	canonical	1	1	junction_5	95.5394043197768	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	NA	False	NA	-5	True	AATAAA	-21	NA	103348219	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343668_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734
ES.37501.18	chrX	-	5618	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1314473106967	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGAGTGTCTGGTGG	10047	False	NA	-8	True	AATAAA	-18	NA	103457457	103324268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103326500_103326547_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.2	chrX	-	5843	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-78	-98	-68	98	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATGGCCTTGCGGCTT	9974	False	NA	96	True	AATAAA	-24	NA	103457530	103324164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.20	chrX	-	5522	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.827184299424	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGAGTGTCTGGTGG	10047	False	NA	-8	True	AATAAA	-18	NA	103457457	103324268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103326276_103326323_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344424_103345384_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.22	chrX	-	3877	4	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	117941	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.124245031395	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATGAGTGTCTGGTGG	NA	False	NA	-8	True	AATAAA	-18	NA	103339511	103324268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327859_103334728_103334837_103338073_103338178_103339436
ES.37501.23	chrX	-	5547	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	15	105	15	-105	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATCTCAGCCAAGC	9876	False	NA	-107	True	GATAAA	-42	NA	103457437	103324367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.24	chrX	-	4923	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	12	732	12	-732	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCCAGTTTACAAAAGT	9873	False	NA	NA	False	ATTAAA	-22	NA	103457440	103324994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.25	chrX	-	3823	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	16	1828	16	-1828	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATCGTGACTTGCCA	9877	False	NA	NA	False	ATTAAA	-15	NA	103457436	103326090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.26	chrX	-	3660	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-5	2012	-5	-2012	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATTTTAAATTGTT	10047	False	NA	NA	False	NA	NA	NA	103457457	103326274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.27	chrX	-	2882	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	12	2773	12	-2773	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTTATCTTTAATCAC	9873	False	NA	NA	False	NA	NA	NA	103457440	103327035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.28	chrX	-	2776	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-62	2953	-52	-2953	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGGGGTTTTTTTCTCC	9990	False	NA	NA	False	AATAAA	-8	NA	103457514	103327215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.29	chrX	-	2490	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-60	3237	-50	-3237	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTGGATTTTTATGTCT	9992	False	NA	5	True	ATTAAA	-18	NA	103457512	103327499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.3	chrX	-	5594	14	NIC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	1	93	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	81.643183839532	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAAGATGGCCTTGC	9862	False	NA	91	True	AATAAA	-19	NA	103457451	103324169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103457262
ES.37501.30	chrX	-	2558	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	12	-3242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	100.43024631554	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGGGTTGGATTTTTA	9873	False	NA	0	True	ATTAAA	-13	NA	103457440	103327504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103440147_103440293_103457262
ES.37501.31	chrX	-	2376	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	-69	3360	-59	-3360	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTCTTGTTTGGT	9983	False	NA	NA	False	NA	NA	NA	103457521	103327622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.32	chrX	-	1870	13	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	90392	-9922	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.9444260607378	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAAATCTTTGCATGGT	NA	False	NA	NA	False	AATAAA	-27	NA	103367060	103334184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103334344_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939
ES.37501.33	chrX	-	2226	16	NNC	ENSMUSG00000031333.8	novel	593	3	NA	NA	-11	-9935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	102.854589915408	1375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTTTTGTCCTAAAAA	10031	False	NA	NA	False	AATAAA	-14	NA	103457473	103334197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103334344_103334728_103334837_103338073_103338172_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.34	chrX	-	11017	1	Intergenic	novelGene_30721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAAACTTTAG	NA	False	NA	NA	False	NA	NA	NA	103383722	103372705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103372700_103383700
ES.37501.35	chrX	-	3270	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-271	-593	-271	593	mono-exon	FALSE	NA	NA	NA	NA	NA	1302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTAAAGGAGATAGGAT	NA	False	NA	NA	False	NA	NA	NA	103392111	103388841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103388800_103392100
ES.37501.36	chrX	-	3154	2	Genic_Genomic	ENSMUSG00000083327.2	novel	2406	1	NA	NA	-260	592	multi-exon	FALSE	canonical	1	64	junction_1	0	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGTAAAGGAGATAGGA	NA	False	NA	NA	False	NA	NA	NA	103392100	103388842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_103391712_103391815
ES.37501.37	chrX	-	3147	2	Genic_Genomic	ENSMUSG00000083327.2	novel	2406	1	NA	NA	-241	590	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCCAAGTAAAGGAGATAG	NA	False	NA	NA	False	NA	NA	NA	103392081	103388844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_103391306_103391395
ES.37501.38	chrX	-	3051	2	Genic_Genomic	ENSMUSG00000083327.2	novel	2406	1	NA	NA	-271	554	multi-exon	FALSE	canonical	0	0	junction_1	0	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGGAAAAAAAAAAATA	NA	False	NA	NA	False	AATAAA	-10	NA	103392111	103388880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_103391265_103391444
ES.37501.39	chrX	-	3012	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-256	-350	-256	350	mono-exon	FALSE	NA	NA	NA	NA	NA	1301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCAAGTCCTCTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	103392096	103389084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103389100_103392100
ES.37501.4	chrX	-	5663	16	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.1357821564602	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9859	False	NA	-2	True	AATAAA	-24	NA	103457454	103324262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334734_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.40	chrX	-	2901	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-271	-224	-271	224	mono-exon	FALSE	NA	NA	NA	NA	NA	1299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAAGGAATTGGGTCT	NA	False	NA	11	True	AATAAA	-34	NA	103392111	103389210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103389200_103392100
ES.37501.41	chrX	-	5851	1	NIC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	16	-65714	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGAAATTTGTAATGCT	9877	False	NA	NA	False	NA	NA	NA	103457436	103451585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103451600_103457400
ES.37501.5	chrX	-	5796	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	100.43024631554	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9877	False	NA	-2	True	AATAAA	-24	NA	103457436	103324262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103440147_103440293_103457262
ES.37501.6	chrX	-	5649	16	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	76.3644478071366	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9870	False	NA	-2	True	AATAAA	-24	NA	103457443	103324262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386178_103388530_103388609_103457262
ES.37501.7	chrX	-	5610	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	75.1314473106967	1429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9873	False	NA	-2	True	AATAAA	-24	NA	103457440	103324262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345498_103345542_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.8	chrX	-	5411	17	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1314473106967	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTGTCTGGTGGAAAT	9873	False	NA	-4	True	AATAAA	-22	NA	103457440	103324264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103324957_103325198_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ES.37501.9	chrX	-	3743	9	NNC	ENSMUSG00000031333.8	novel	5667	16	NA	NA	111983	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.9643243800512	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTCTGGTGGAAA	NA	False	NA	-5	True	AATAAA	-21	NA	103345469	103324265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103324951_103325712_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399
ES.37502.1	chrX	+	178	1	Intergenic	novelGene_30724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTCATGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	103467552	103467730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_103467600_103467700
ES.37503.1	chrX	-	197	1	Intergenic	novelGene_30725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATAGGCACAGCC	9181	False	NA	NA	False	NA	NA	NA	103468963	103468766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_103468800_103469000
ES.37504.1	chrX	+	7088	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	-46	-4738	-46	4738	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTCTTTCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	103526377	103555834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ES.37504.2	chrX	+	6267	7	NNC	ENSMUSG00000073016.4	novel	2304	7	NA	NA	-18	4698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.01732359773132	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATTAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	103526405	103555794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103550514
ES.37504.3	chrX	+	2310	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	-14	8	-14	-8	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATAAGGTTTGTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	103526409	103551088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ES.37504.4	chrX	+	6948	8	NNC	ENSMUSG00000073016.4	novel	2304	7	NA	NA	-14	4723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.77424137532083	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAACTGACTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	103526409	103555819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_103526436_103526528_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ES.37504.5	chrX	+	1210	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	-8	1102	-8	-1102	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAAATATTGGAAGTT	NA	False	NA	NA	False	NA	NA	NA	103526415	103549994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ES.37504.6	chrX	+	2626	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	10	-332	10	332	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTTCTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	103526433	103551428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ES.37505.1	chrX	+	2084	3	Antisense	novelGene_ENSMUSG00000033906.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGCTTGTTGCGT	7568	False	NA	NA	False	NA	NA	NA	103713609	103742213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_103713766_103724291_103724365_103740358
ES.37506.1	chrX	-	5580	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-32	-39	-32	39	multi-exon	TRUE	canonical	3	93	junction_8	6.78841989185253	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTAGAGCTTCACTCT	NA	False	NA	NA	False	CATAAA	-40	NA	103714702	103580535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.10	chrX	-	4961	10	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	-352	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	44.303108605365	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATAAATTTGTTGTGTC	NA	False	NA	NA	False	ATTAAA	-6	NA	103715022	103580583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103676189_103676217_103714944
ES.37506.11	chrX	-	4121	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	2	1386	2	-1386	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGAGAGACTTTACTT	NA	False	NA	NA	False	AATAAA	-34	NA	103714668	103581960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.12	chrX	-	3891	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	272	-1400	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	36.636635428974	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACAGATATTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	103714398	103581974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592741_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.13	chrX	-	3967	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	35	-1558	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	36.4447831962576	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCCATTCTTTTCCTC	NA	False	NA	NA	False	AATAAA	-36	NA	103714635	103582132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592738_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.14	chrX	-	3982	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-31	1558	-31	-1558	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCCATTCTTTTCCTC	NA	False	NA	NA	False	AATAAA	-36	NA	103714701	103582132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.16	chrX	-	4076	1	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	128440	-1580	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTATTTCTGAGCAAACA	NA	False	NA	NA	False	AATAAA	-14	NA	103586230	103582154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103582200_103586200
ES.37506.17	chrX	-	3592	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-23	1940	-23	-1940	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATTCTTGTTTTAGTAT	NA	False	NA	NA	False	AATAAA	-37	NA	103714693	103582514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.18	chrX	-	3419	14	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	259	-1940	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.7088267797425	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATTCTTGTTTTAGTAT	NA	False	NA	NA	False	AATAAA	-37	NA	103714411	103582514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592119_103592175_103592686_103592741_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.19	chrX	-	3531	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	89	-1940	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	36.4447831962576	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATTCTTGTTTTAGTAT	NA	False	NA	NA	False	AATAAA	-37	NA	103714581	103582514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592738_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.2	chrX	-	4634	6	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	270	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	42.9725493774805	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714400	103580574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103641697_103641793_103676189_103676217_103714269
ES.37506.20	chrX	-	3176	11	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	269	-1943	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	30.7579258078304	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTATTCTTGTTTTAG	NA	False	NA	NA	False	AATAAA	-34	NA	103714401	103582517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103641697_103641793_103676189_103676217_103714269
ES.37506.21	chrX	-	3125	8	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	96	-1943	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	37.3811040336627	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTATTCTTGTTTTAG	NA	False	NA	NA	False	AATAAA	-34	NA	103714574	103582517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103641697_103641793_103676189_103676217_103714269
ES.37506.22	chrX	-	3536	11	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	4	-1962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.1448285109751	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGCTTGGAGAAAGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	103714666	103582536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641813_103714269
ES.37506.23	chrX	-	2604	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	92	2813	92	-2813	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAGTGGGAGTTACAGG	NA	False	NA	NA	False	AATAAA	-19	NA	103714578	103583387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.24	chrX	-	1991	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	257	3261	257	-3261	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGTAAATTACTTTT	NA	False	NA	NA	False	NA	NA	NA	103714413	103583835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.25	chrX	-	1648	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	-12	3873	-12	-3873	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACTGTAGGGTCTTTC	NA	False	NA	46	True	NA	NA	NA	103714682	103584447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.26	chrX	-	1573	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	61	-3919	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	42.743420546325	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGCCTTAGAGTCTAA	NA	False	NA	0	True	AATATA	-42	NA	103714609	103584493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592741_103604290_103604406_103607447_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.27	chrX	-	1283	10	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	76	-3934	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	33.2903426473842	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGGGAATTCAGAAGAT	NA	False	NA	-15	True	AATATA	-27	NA	103714594	103584508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103676189_103676217_103714269
ES.37506.28	chrX	-	1330	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	143	4036	143	-4036	multi-exon	FALSE	canonical	3	93	junction_8	6.78841989185253	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCGGAAACAATTGCTTCA	NA	False	NA	-117	True	AATGAA	-5	NA	103714527	103584610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.3	chrX	-	5372	11	NIC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_8	30.7579258078304	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714654	103580574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103641697_103641793_103676189_103676217_103714269
ES.37506.4	chrX	-	5333	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.4942320161455	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714608	103580574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103582385_103582498_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.5	chrX	-	5313	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	36.4447831962576	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714423	103580574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592738_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.6	chrX	-	5049	13	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	245	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.4942320161455	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714425	103580574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103583266_103583480_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ES.37506.7	chrX	-	4939	9	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	273	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	49.7292670366254	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTTGTGTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	103714397	103580577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103592686_103592738_103604290_103604395_103607426_103607554_103609307_103609441_103641697_103641793_103676189_103676217_103714269
ES.37506.9	chrX	-	5215	11	NNC	ENSMUSG00000033906.6	novel	5509	12	NA	NA	260	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	42.3867903951219	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTGTTGTGTCTTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	103714410	103580579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607552_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103714269
ES.37507.1	chrX	-	2292	1	FSM	ENSMUSG00000031224.7	ENSMUST00000033575.7	2316	1	23	1	23	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCATGCTTATGTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	103900850	103898558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_103898600_103900800
ES.37508.1	chrX	-	3467	8	NIC	ENSMUSG00000087174.8	novel	1887	8	NA	NA	-2	4	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	41.0867673220904	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTAGACTTTTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	104113716	104080798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104083419_104086735_104086911_104087607_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ES.37508.10	chrX	-	772	5	NIC	ENSMUSG00000087174.8	novel	3287	6	NA	NA	7	-4	combination_of_known_splicesites	FALSE	canonical	2	13	junction_4	26.7803566070357	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113686	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113605
ES.37508.11	chrX	-	824	6	FSM	ENSMUSG00000087174.8	ENSMUST00000146227.8	531	6	-25	-268	-9	-5	multi-exon	FALSE	canonical	3	8	junction_5	40.4899987651272	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACAGTTGTGGATTTAC	NA	False	NA	-8	True	AATAAA	-12	NA	104113739	104087413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113670
ES.37508.12	chrX	-	174	1	Intergenic	novelGene_30726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACAAACCAACC	NA	False	NA	NA	False	NA	NA	NA	104089166	104088992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104089000_104089200
ES.37508.13	chrX	-	3595	1	Intergenic	novelGene_30727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATAACTGCTTGATCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	104102932	104099337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104099300_104102900
ES.37508.2	chrX	-	1828	7	NIC	ENSMUSG00000087174.8	novel	1691	7	NA	NA	0	174	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	39.4785455096253	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTATTAGTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	104113693	104082239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104083419_104087607_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ES.37508.3	chrX	-	5909	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	43	-2220	6	174	multi-exon	FALSE	canonical	3	29	junction_1	38.5940409908058	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTATTAGTTCT	NA	False	NA	NA	False	AATAAA	-13	NA	104113687	104082239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ES.37508.4	chrX	-	2522	1	NIC	ENSMUSG00000087174.8	novel	3164	6	NA	NA	28699	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGACCTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	104084942	104082420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104082400_104084900
ES.37508.5	chrX	-	853	6	FSM	ENSMUSG00000087174.8	ENSMUST00000140954.8	3287	6	28	2406	0	-4	multi-exon	FALSE	canonical	3	59	junction_2	25.9183332797462	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113702	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ES.37508.6	chrX	-	768	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	-63	4	6	-4	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113724	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ES.37508.7	chrX	-	973	7	NNC	ENSMUSG00000087174.8	novel	631	7	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.3009465764435	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113699	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104087718_104091514_104091617_104107912_104108036_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ES.37508.8	chrX	-	2327	4	NIC	ENSMUSG00000087174.8	novel	3732	5	NA	NA	1	-4	intron_retention	FALSE	canonical	3	29	junction_1	44.1588043316392	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113692	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104087718_104110364_104112235_104113216_104113282_104113605
ES.37508.9	chrX	-	642	5	NIC	ENSMUSG00000087174.8	novel	709	6	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	44.3790491110389	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGTGGATTTACA	NA	False	NA	-7	True	AATAAA	-13	NA	104113700	104087412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104087718_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ES.37509.1	chrX	+	6314	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	-25	-3651	-25	3651	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAATGGAGCATTATA	NA	False	NA	NA	False	TTTAAA	-40	NA	104123336	104132443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.10	chrX	+	6951	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	26	-4339	7	4339	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTTATTTGTCCATTT	NA	False	NA	NA	False	NA	NA	NA	104123387	104133131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.11	chrX	+	2124	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	26	488	7	-488	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGGAGAGTCCCTT	NA	False	NA	NA	False	ATTAAA	-31	NA	104123387	104128304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.12	chrX	+	909	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	28	1701	9	325	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGACTGATCTTAGA	NA	False	NA	21	True	AATAAA	-18	NA	104123389	104127091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.13	chrX	+	1251	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	28	1359	9	667	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATAGCTCTCTGATTTC	NA	False	NA	NA	False	TTTAAA	-26	NA	104123389	104127433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.14	chrX	+	1360	5	NNC	ENSMUSG00000031226.14	novel	2638	6	NA	NA	226	325	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	637.802624249854	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGACTGATCTTAGA	NA	False	NA	21	True	AATAAA	-18	NA	104123606	104127091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_104124184_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.15	chrX	+	2316	1	Intergenic	novelGene_30728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGACAAGTGTGGTTTA	NA	False	NA	NA	False	NA	NA	NA	104135231	104137547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104135200_104137500
ES.37509.16	chrX	+	3916	1	Intergenic	novelGene_30730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	104142768	104146684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104142800_104146700
ES.37509.2	chrX	+	1052	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	-14	1600	-14	426	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCCCTGTTCTCAGTA	NA	False	NA	122	True	TATAAA	-14	NA	104123347	104127192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.3	chrX	+	932	6	NNC	ENSMUSG00000031226.14	novel	2638	6	NA	NA	2	329	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	559.857696205027	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGATCTTAGAAAGT	NA	False	NA	25	True	AATAAA	-22	NA	104123363	104127095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126628
ES.37509.4	chrX	+	8129	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	8	-5499	3	5499	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGTCAAGACTTTTA	NA	False	NA	NA	False	NA	NA	NA	104123369	104134291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.5	chrX	+	712	6	NNC	ENSMUSG00000031226.14	novel	1239	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	559.074950252647	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGCCAGAGTTCCTTT	NA	False	NA	4	True	AATAAA	-19	NA	104123379	104160695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104160432
ES.37509.6	chrX	+	2610	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	9	0	-9	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGGAAAAAAATAGC	NA	False	NA	NA	False	NA	NA	NA	104123380	104128783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.8	chrX	+	7941	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	-5322	0	5322	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCATGGTGCAT	NA	False	NA	NA	False	AATAAA	-13	NA	104123380	104134114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ES.37509.9	chrX	+	817	7	NNC	ENSMUSG00000031226.14	novel	1239	6	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	661.832242087575	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGCCAGAGTTCCTTT	NA	False	NA	4	True	AATAAA	-19	NA	104123386	104160695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104159919_104160032_104160432
ES.3751.1	chr10	-	157	1	Intergenic	novelGene_2853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	114842206	114842049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_114842000_114842200
ES.37510.1	chrX	-	5034	1	Intergenic	novelGene_30729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGGTACAGCACTGAAG	NA	False	NA	NA	False	NA	NA	NA	104144233	104139199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104139200_104144200
ES.37510.2	chrX	-	2152	2	Antisense	novelGene_ENSMUSG00000031226.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104142541	104139222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_104140229_104141395
ES.37511.1	chrX	-	3020	1	Intergenic	novelGene_30731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-23	NA	104152985	104149965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104150000_104153000
ES.37512.1	chrX	-	156	1	Intergenic	novelGene_30732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTGCCACAG	NA	False	NA	NA	False	NA	NA	NA	104156141	104155985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104156000_104156100
ES.37513.1	chrX	+	3595	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	-11	-34	-11	34	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGGGCACAGTAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	104163972	104167567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_104164000_104167600
ES.37514.1	chrX	-	157	1	Intergenic	novelGene_30733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGTCATTCA	NA	False	NA	NA	False	NA	NA	NA	104176877	104176720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104176700_104176900
ES.37515.1	chrX	+	213	1	Intergenic	novelGene_30734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGTTCAACAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	104194707	104194920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104194700_104194900
ES.37516.1	chrX	+	178	1	Intergenic	novelGene_30735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGAGAGTCATCT	NA	False	NA	NA	False	NA	NA	NA	104246255	104246433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104246300_104246400
ES.37517.1	chrX	-	304	1	FSM	ENSMUSG00000085791.5	ENSMUST00000122265.2	345	1	86	-45	86	45	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-22	NA	104322501	104322197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104322200_104322500
ES.37518.1	chrX	+	6144	2	Intergenic	novelGene_30736	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATTGTTGTTTACAT	NA	False	NA	NA	False	ATTAAA	-3	NA	104322985	104339025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104323070_104332965
ES.37519.1	chrX	-	3289	1	Intergenic	novelGene_30737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	104327619	104324330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104324300_104327600
ES.3752.1	chr10	-	1487	4	NNC	ENSMUSG00000006764.9	novel	2626	11	NA	NA	75500	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGGGTATCTCTTATC	NA	False	NA	NA	False	AATAAA	-14	NA	114935963	114914549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_114915747_114915879_114916014_114926606_114926703_114935903
ES.37520.1	chrX	-	176	1	Intergenic	novelGene_30738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGACTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	104328267	104328091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104328100_104328300
ES.37521.1	chrX	-	1208	3	Genic_Genomic	ENSMUSG00000063442.6	novel	387	1	NA	NA	-39498	339	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACTTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	104808618	104768394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_104769121_104794791_104794967_104808311
ES.37522.1	chrX	+	190	1	Intergenic	novelGene_30739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTAAGCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	104906052	104906242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104906100_104906200
ES.37523.1	chrX	+	133	1	Intergenic	novelGene_30740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	104916552	104916685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104916600_104916700
ES.37524.1	chrX	+	215	1	Intergenic	novelGene_30741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATGAGATAGTAGGTAG	NA	False	NA	NA	False	AATAAA	-9	NA	104931644	104931859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104931600_104931900
ES.37525.1	chrX	+	182	1	Intergenic	novelGene_30743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATAAATTCTAATA	NA	False	NA	NA	False	NA	NA	NA	104942611	104942793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104942600_104942800
ES.37526.1	chrX	+	155	1	Intergenic	novelGene_30744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	104944333	104944488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104944300_104944500
ES.37527.1	chrX	+	168	1	Intergenic	novelGene_30745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGCTGAAGTGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	104958287	104958455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104958300_104958500
ES.37528.1	chrX	+	2556	2	Antisense	novelGene_ENSMUSG00000031229.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104960792	104964062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_104961258_104961971
ES.37528.2	chrX	+	3306	1	Intergenic	novelGene_30746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGGGTCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	104960792	104964098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104960800_104964100
ES.37528.3	chrX	+	2042	2	Antisense	novelGene_ENSMUSG00000031229.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGGGTCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	104960792	104964098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_104961014_104962277
ES.37528.4	chrX	+	2790	2	Antisense	novelGene_ENSMUSG00000031229.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTGGGGTCAGGGAT	NA	False	NA	NA	False	NA	NA	NA	104960792	104964096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_104961016_104961529
ES.37528.6	chrX	+	691	2	Antisense	novelGene_ENSMUSG00000031229.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104960798	104962005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_104961014_104961529
ES.37529.1	chrX	+	179	1	Intergenic	novelGene_30747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104968807	104968986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_104968800_104969000
ES.3753.1	chr10	+	322	3	Antisense	novelGene_ENSMUSG00000006764.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCTGGTGTCCATGGAA	NA	False	NA	NA	False	NA	NA	NA	114936078	114950095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_114936135_114937978_114938042_114949892
ES.37530.1	chrX	-	10759	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	217	combination_of_known_junctions	FALSE	canonical	3	39	junction_29	58.1469917799814	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTTGTGTGTGTTGTTT	NA	False	NA	0	True	AAAAAG	-16	NA	104972953	104841003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.10	chrX	-	10222	35	FSM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53	0	0	0	multi-exon	FALSE	canonical	3	37	junction_34	46.470253163349	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972956	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.100	chrX	-	2724	8	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	108596	1024	5318	-1024	3prime_fragment	FALSE	canonical	3	221	junction_7	16.952514713223	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGTAAGAACTAGTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	104864413	104842244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381
ES.37530.101	chrX	-	7856	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	32	629	combination_of_known_junctions	FALSE	canonical	3	34	junction_34	46.7994414097324	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGAGTTCTTAGAGT	NA	False	NA	NA	False	AATAAA	-27	NA	104972151	104843393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.102	chrX	-	6486	27	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-14	2419	combination_of_known_junctions	FALSE	canonical	3	39	junction_21	50.8895427581166	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTTATTTATAAAGGTAA	NA	False	NA	NA	False	GATAAA	-7	NA	104972923	104867330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.103	chrX	-	2001	1	FSM	ENSMUSG00000079965.3	ENSMUST00000116081.3	549	1	-1223	-229	-1223	229	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAGTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	104889842	104887841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104887800_104889800
ES.37530.104	chrX	-	5474	19	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	883	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	65.7128057497637	519	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTATGTTACTACTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	104972977	104889106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899467_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.105	chrX	-	4920	16	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-803	combination_of_known_junctions	FALSE	canonical	3	37	junction_15	67.7887568521179	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGTTTTGTCTTCTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	104972952	104891145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.106	chrX	-	5027	16	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-804	combination_of_known_junctions	FALSE	canonical	3	69	junction_15	52.776509926292	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTATGTTTTGTCTTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	104972916	104891146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.107	chrX	-	5520	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-807	intron_retention	FALSE	canonical	0	0	junction_13	89.5215171945624	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCTATGTTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	104972182	104891149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104970783_104970965_104972093
ES.37530.108	chrX	-	5701	15	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	7	-807	intron_retention	FALSE	canonical	3	39	junction_9	64.2188938438729	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCTATGTTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	104972902	104891149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.109	chrX	-	4886	17	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	18	-807	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	85.3191618278098	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCTATGTTTTGTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	104972165	104891149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104954179_104954250_104955075_104955261_104972093
ES.37530.11	chrX	-	7069	28	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	73.9982945712352	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972952	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104903493_104903857_104911456_104911530_104972564
ES.37530.110	chrX	-	5112	17	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-816	combination_of_known_junctions	FALSE	canonical	3	14	junction_16	70.6677967676933	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTAAATTTTACCTATG	NA	False	NA	NA	False	ATTAAA	-14	NA	104972969	104891158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972705
ES.37530.111	chrX	-	4664	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	334	combination_of_known_junctions	FALSE	canonical	3	27	junction_9	69.3713103395406	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAGGAAGAAAGGCG	NA	False	NA	70	True	GATAAA	-28	NA	104972916	104894708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.112	chrX	-	5065	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	65.0664190569059	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTTTCCTTTGTC	NA	False	NA	-3	True	AATAAA	-21	NA	104972953	104895039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.113	chrX	-	4652	12	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	11	junction_11	84.1395927871069	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTTTCCTTTGTC	NA	False	NA	-3	True	AATAAA	-21	NA	104972183	104895039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104972093
ES.37530.114	chrX	-	5294	15	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	16	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_12	95.5377102595235	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGATTGTTTTCCTTTGT	NA	False	NA	-4	True	AATAAA	-20	NA	104972932	104895040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.115	chrX	-	5052	14	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	40	53820	3	2	5prime_fragment	FALSE	canonical	3	37	junction_13	60.9118093698591	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGATTGTTTTCCTTTGT	NA	False	NA	-4	True	AATAAA	-20	NA	104972969	104895040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.116	chrX	-	5180	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	3	69	junction_13	54.6632509636699	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972957	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.117	chrX	-	2646	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.8393181032923	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972950	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104918560_104921086_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.118	chrX	-	4877	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	61.5256717478458	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972183	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.12	chrX	-	2958	2	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1053	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104920254	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104843827_104919902
ES.37530.120	chrX	-	4974	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	77.4752648699355	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104973009	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.121	chrX	-	5434	16	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	84.752345100298	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972956	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.122	chrX	-	4989	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	102.228335861742	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGATTGTTTTCCTTTG	NA	False	NA	-5	True	AATAAA	-19	NA	104972167	104895041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918172_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104955680_104955745_104972093
ES.37530.123	chrX	-	5210	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	0	combination_of_known_splicesites	TRUE	canonical	2	12	junction_12	77.9011663325802	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGATTGTTTTCCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	104972916	104895042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104955075_104955261_104972564
ES.37530.125	chrX	-	5283	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	88.4860187272774	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGATTGTTTTCCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	104972096	104895042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104970783_104970965_104971777
ES.37530.127	chrX	-	4758	13	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.4072057877104	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTGATTGTTTTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	104972182	104895043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911527_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972093
ES.37530.128	chrX	-	4923	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_12	69.6843578016058	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTGATTGTTTTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	104972956	104895043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972705
ES.37530.130	chrX	-	5255	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	82.7233215544086	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTGATTGTTTTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	104972964	104895044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.131	chrX	-	5041	15	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	3	26	junction_14	72.6091367163519	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTGATTGTTTTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	104972165	104895044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972093
ES.37530.132	chrX	-	5024	13	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	87.4285422502286	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCTGATTGTTTTCCT	NA	False	NA	-8	True	AATAAA	-16	NA	104972917	104895044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921968_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.134	chrX	-	4947	12	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	80.7344386663886	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCCTGATTGTTTTC	NA	False	NA	-10	True	AATAAA	-14	NA	104972956	104895046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.135	chrX	-	4967	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-11	-101	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	81.5288855785081	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTCTTGAATTTTAT	NA	False	NA	-107	True	TATAAA	-11	NA	104972194	104895143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104970783_104970965_104972093
ES.37530.136	chrX	-	4976	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-102	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	65.0664190569059	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTCTTGAATTTTA	NA	False	NA	-108	True	TATAAA	-10	NA	104972969	104895144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.137	chrX	-	5076	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-4	-103	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	66.5368163424888	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTCTTGAATTTT	NA	False	NA	-109	True	TATAAA	-9	NA	104972960	104895145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.138	chrX	-	4838	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-222	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	65.0664190569059	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTATATTGGTTACA	NA	False	NA	NA	False	NA	NA	NA	104972951	104895264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.139	chrX	-	4712	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	131	-223	combination_of_known_junctions	FALSE	canonical	3	69	junction_13	54.6632509636699	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTTCTATATTGGTTAC	NA	False	NA	NA	False	NA	NA	NA	104972713	104895265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.14	chrX	-	10666	37	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_34	63.7312729695633	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104973004	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.140	chrX	-	4460	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	153	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	61.5256717478458	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTGTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	104972180	104895455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.141	chrX	-	4606	14	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	58	54248	1	140	5prime_fragment	FALSE	canonical	3	37	junction_13	60.9118093698591	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGAAAGTGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	104972951	104895468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.142	chrX	-	4332	13	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	136	combination_of_known_splicesites	FALSE	canonical	2	11	junction_12	69.0136862433017	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGGAAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	104972182	104895472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972093
ES.37530.143	chrX	-	4817	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	136	combination_of_known_splicesites	FALSE	canonical	2	12	junction_12	77.9011663325802	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGGAAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	104972953	104895472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104955075_104955261_104972564
ES.37530.144	chrX	-	4773	14	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	133	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	83.9023100584012	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAACTTGTGGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	104972916	104895475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.145	chrX	-	6036	1	Genic_Genomic	ENSMUSG00000031229.17	novel	NA	NA	NA	NA	7751	4068	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACCTTTGAGGAACATG	NA	False	NA	NA	False	NA	NA	NA	104911119	104905083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_104905100_104911100
ES.37530.146	chrX	-	4954	11	NNC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-7	2898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.417130849786	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATTTTTAAAAAGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	104972916	104906253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104906895_104911151_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972705
ES.37530.147	chrX	-	6563	12	NNC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-4	95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	111.077219808251	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAAGTTTTCTTCTTCC	NA	False	NA	94	True	AATAAA	-24	NA	104972980	104909056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104918808_104918924_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.148	chrX	-	6508	10	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	89.0960086952951	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGAAGTTTTCTTCTT	NA	False	NA	92	True	AATAAA	-22	NA	104972952	104909058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932602_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.15	chrX	-	10193	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	64.3694142244848	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972908	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881850_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.150	chrX	-	6417	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	91	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	85.0983805662599	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAAGAAGTTTTCTTC	NA	False	NA	90	True	AATAAA	-20	NA	104972973	104909060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.151	chrX	-	6366	10	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	57	67843	0	88	5prime_fragment	FALSE	canonical	3	37	junction_9	71.7696933871734	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGCTAAAGAAGTTTTC	NA	False	NA	87	True	AATAAA	-17	NA	104972952	104909063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.152	chrX	-	4971	9	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	86	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	103.025406453942	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAAGCTAAAGAAGTTT	NA	False	NA	85	True	AATAAA	-15	NA	104972182	104909065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104920059_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.153	chrX	-	6089	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	85	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	93.4946522534845	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTAAGCTAAAGAAGTT	NA	False	NA	84	True	AATAAA	-14	NA	104972183	104909066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.157	chrX	-	6187	8	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	100.572646096526	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTGAAGCATTTAA	NA	False	NA	-2	True	AATAAA	-15	NA	104972951	104909152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.158	chrX	-	6348	12	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	24	-1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	101.88212277995	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTGAAGCATTTAA	NA	False	NA	-2	True	AATAAA	-15	NA	104972159	104909152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972093
ES.37530.159	chrX	-	6303	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	26	junction_10	83.168263177729	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTGAAGCATTTAA	NA	False	NA	-2	True	AATAAA	-15	NA	104972181	104909152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972093
ES.37530.160	chrX	-	6492	10	NIC	ENSMUSG00000031229.17	novel	1716	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	96.0009002015407	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972956	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.161	chrX	-	6118	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	92.9004002951548	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972911	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.163	chrX	-	6315	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	77.9654370538638	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972963	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.165	chrX	-	6313	11	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	84.6581951142357	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972950	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104919356_104919457_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.166	chrX	-	6119	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	72.4906124190497	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972183	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.167	chrX	-	6567	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	99.6897687829599	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGTTGAAGCATTTA	NA	False	NA	-3	True	AATAAA	-14	NA	104972960	104909153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104954179_104954250_104955075_104955261_104972564
ES.37530.168	chrX	-	6179	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	83.4636897099571	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTGTTGAAGCATTT	NA	False	NA	-4	True	AATAAA	-13	NA	104972969	104909154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972705
ES.37530.17	chrX	-	11230	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	0	intron_retention	FALSE	canonical	3	14	junction_11	68.4403985542894	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972957	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.170	chrX	-	6675	12	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	94.635272022348	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTGTTGAAGCATT	NA	False	NA	-5	True	AATAAA	-12	NA	104972957	104909155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.171	chrX	-	6600	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	41	junction_10	80.546942834598	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTGTTGAAGCATT	NA	False	NA	-5	True	AATAAA	-12	NA	104972952	104909155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.175	chrX	-	6744	12	NNC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	96.7499119097555	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCTTGTTGAAGCAT	NA	False	NA	-6	True	AATAAA	-11	NA	104972916	104909156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104970783_104970965_104972564
ES.37530.177	chrX	-	6306	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	2	12	junction_8	94.7770613493829	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTTCTTGTTGAAG	NA	False	NA	-9	True	AATAAA	-8	NA	104972916	104909159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104955075_104955261_104972705
ES.37530.178	chrX	-	6177	10	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-279	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	80.7231207413478	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTTCTTGTTGAAG	NA	False	NA	-9	True	AATAAA	-8	NA	104972462	104909159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972308
ES.37530.18	chrX	-	11017	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	0	intron_retention	FALSE	canonical	3	69	junction_33	42.3162912270671	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972916	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.180	chrX	-	4606	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-1777	combination_of_known_junctions	FALSE	canonical	3	69	junction_9	64.4373559319916	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCTTTGATTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	104972916	104910928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.181	chrX	-	3520	10	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-1777	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	82.6565107262102	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCTTTGATTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	104972951	104910928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104911530_104918165_104920059_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.182	chrX	-	4271	10	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-1847	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	72.4906124190497	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGCTGAGACTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	104972180	104910998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.183	chrX	-	3692	9	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	1	225	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	78.0588720133721	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGACTTGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	104972951	104918510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.184	chrX	-	3156	8	FSM	ENSMUSG00000031229.17	ENSMUST00000198448.5	1835	8	32	-1353	-7	-25	multi-exon	FALSE	canonical	2	8	junction_7	83.9589306793287	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGGAAAGATAAATC	NA	False	NA	NA	False	AGTAAA	-31	NA	104972916	104918760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972705
ES.37530.185	chrX	-	2670	9	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-5	551	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	78.0588720133721	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAACGGAAAAATT	NA	False	NA	13	True	AATGAA	-45	NA	104972981	104919562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.186	chrX	-	5204	1	Intergenic	novelGene_30742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTAGTATTATCAGTATC	NA	False	NA	NA	False	NA	NA	NA	104940078	104934874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104934900_104940100
ES.37530.2	chrX	-	10555	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	15	215	combination_of_known_junctions	FALSE	canonical	3	69	junction_34	43.1735453408802	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGACTTGTGTGTGTTGT	NA	False	NA	-2	True	AAAAAG	-14	NA	104972933	104841005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.20	chrX	-	10262	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_29	50.9618233388144	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972969	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.21	chrX	-	9248	24	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-9858	0	intron_retention	FALSE	canonical	0	0	junction_18	67.7178623753592	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104905278	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890422_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104903493
ES.37530.28	chrX	-	10061	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_34	46.7994414097324	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972183	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.29	chrX	-	10498	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_33	69.1679057343322	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972950	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.3	chrX	-	10272	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_33	48.0636821209802	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972978	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972564
ES.37530.31	chrX	-	10407	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_35	55.6191862359656	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972956	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972705
ES.37530.32	chrX	-	10766	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_19	58.6598418269165	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972174	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890422_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.33	chrX	-	10862	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_11	71.5734354176459	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972952	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104873196_104873261_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.34	chrX	-	11334	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_34	53.848949317146	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972956	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.35	chrX	-	9120	16	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2253	0	intron_retention	FALSE	canonical	3	169	junction_10	31.4821995560807	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104892816	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102
ES.37530.36	chrX	-	6657	18	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	82032	0	-414	0	intron_retention	FALSE	canonical	3	169	junction_11	31.1957764863809	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104890977	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400
ES.37530.37	chrX	-	10370	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_34	43.1735453408802	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972963	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.39	chrX	-	7137	27	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	52.1270636927764	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104918982	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899640_104900063_104900225_104911456_104911530_104918165
ES.37530.4	chrX	-	10217	35	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	58.4045075759595	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972957	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890394_104891185_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.41	chrX	-	10052	35	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	56.9627146917341	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972165	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.42	chrX	-	9979	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_29	54.9581024155701	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972218	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.43	chrX	-	11022	33	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	14	0	intron_retention	FALSE	canonical	3	14	junction_11	61.5859964678457	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972934	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.44	chrX	-	9849	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	74.0716403028403	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972155	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891041_104891117_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.45	chrX	-	9412	26	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-505	0	intron_retention	FALSE	canonical	3	7	junction_11	74.3043901798541	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104919706	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104873196_104873261_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ES.37530.47	chrX	-	10245	36	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_35	54.4711569436111	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972182	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972093
ES.37530.5	chrX	-	10548	36	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	62.4780385905516	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972957	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895571_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.51	chrX	-	9956	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	71.6956376832644	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972182	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895569_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.52	chrX	-	11936	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	65.9982051680154	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972958	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104871519_104871611_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.53	chrX	-	9916	26	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1018	0	intron_retention	FALSE	canonical	3	7	junction_11	64.3950805574463	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104920219	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104873196_104873261_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ES.37530.54	chrX	-	6730	8	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	16	0	intron_retention	FALSE	canonical	3	221	junction_6	17.5208330805568	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104869715	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314
ES.37530.56	chrX	-	8401	28	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1018	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.5918068249861	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104920219	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891041_104891117_104891233_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ES.37530.57	chrX	-	7032	3	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2707	0	intron_retention	FALSE	canonical	3	247	junction_2	12	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	7144	False	NA	-2	True	ATTAAA	-19	NA	104850111	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104846422_104847389
ES.37530.6	chrX	-	10484	37	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_34	65.7101285012769	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972963	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972705
ES.37530.60	chrX	-	10130	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_33	50.5239399019312	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972977	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972705
ES.37530.61	chrX	-	6638	28	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	446	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	62.99502451666	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTGTGCTCTTTAT	NA	False	NA	-5	True	ATTAAA	-16	NA	104918424	104841223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104873196_104873261_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ES.37530.63	chrX	-	10391	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-4	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	71.0373214448735	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972960	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104954179_104954250_104955075_104955261_104972564
ES.37530.66	chrX	-	12197	32	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-4	intron_retention	FALSE	canonical	3	37	junction_31	47.0199328954233	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972951	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.67	chrX	-	9941	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	61.6250250290053	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972182	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867420_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104972093
ES.37530.68	chrX	-	2965	4	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	29	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.622554543679	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104845627	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104842187_104842229_104844063_104844953_104845083_104845586
ES.37530.7	chrX	-	10376	35	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	54.1101097692359	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972960	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.70	chrX	-	10103	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-4	combination_of_known_junctions	FALSE	canonical	3	19	junction_29	54.6719912746529	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972958	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ES.37530.71	chrX	-	10246	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_34	62.5258493257791	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972916	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972705
ES.37530.72	chrX	-	2902	12	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1841	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.6507510507694	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104880036	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104842646_104846338_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915
ES.37530.73	chrX	-	10214	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_11	60.6745068042686	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972916	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.76	chrX	-	9872	34	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-12080	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	61.0550489989523	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104943509	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883581_104889112_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486
ES.37530.77	chrX	-	10312	37	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	3	11	junction_34	64.8005963240356	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972183	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972093
ES.37530.78	chrX	-	4427	13	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2899	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	85.383896152742	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104876151	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845667_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052
ES.37530.79	chrX	-	6148	15	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	32	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2774882369316	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104972151	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104843093_104895603_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.8	chrX	-	6466	10	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	100769	0	1012	0	3prime_fragment	FALSE	canonical	3	210	junction_9	19.5245967062885	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104872240	104841220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706
ES.37530.80	chrX	-	6220	26	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-4700	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	65.7972643808236	538	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	104900120	104841224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104890987_104891117_104891233_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063
ES.37530.81	chrX	-	6769	7	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	1227	-5	intron_retention	FALSE	canonical	3	228	junction_6	15.1042672410445	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTGTTGTGCTCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	104868504	104841225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104864491_104867314
ES.37530.84	chrX	-	7293	18	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	375	-5	intron_retention	FALSE	canonical	3	181	junction_14	28.5016845249758	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTGTTGTGCTCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	104894757	104841225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104891330_104894642
ES.37530.86	chrX	-	10726	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	24	-5	intron_retention	FALSE	canonical	3	34	junction_33	46.1616515261894	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATGTGTTGTGCTCTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	104972159	104841225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.88	chrX	-	12751	33	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_22	67.3680930481003	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATGTGTTGTGCTCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	104972953	104841226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104903493_104903857_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.90	chrX	-	10421	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-1	-6	combination_of_known_junctions	FALSE	canonical	3	27	junction_29	59.5473699952937	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATGTGTTGTGCTCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	104972949	104841226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104955075_104955261_104972564
ES.37530.91	chrX	-	4327	14	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2926	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.2052407085803	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATGTGTTGTGCTCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	104876178	104841226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104842147_104842278_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052
ES.37530.92	chrX	-	11319	36	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	-2	-7	intron_retention	FALSE	canonical	0	0	junction_19	72.1732835413691	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAATGTGTTGTGCTCT	NA	False	NA	-9	True	ATTAAA	-12	NA	104972950	104841227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890422_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37530.93	chrX	-	10631	33	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-7	intron_retention	FALSE	canonical	3	19	junction_28	54.6902410027374	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAATGTGTTGTGCTCT	NA	False	NA	-9	True	ATTAAA	-12	NA	104972183	104841227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972093
ES.37530.95	chrX	-	10526	36	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	59.8454199226164	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAATGTGTTGTGCTCT	NA	False	NA	-9	True	ATTAAA	-12	NA	104972945	104841227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104970783_104970965_104972564
ES.37530.96	chrX	-	5085	10	NNC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.0539215527453	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAATGTGTTGTGCTCT	NA	False	NA	-9	True	ATTAAA	-12	NA	104972957	104841227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104842716_104918614_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
ES.37530.97	chrX	-	9982	33	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	-9	combination_of_known_junctions	FALSE	canonical	2	8	junction_32	57.6693074645214	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAAAATGTGTTGTGCT	NA	False	NA	-11	True	ATTAAA	-10	NA	104972952	104841229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104972705
ES.37530.98	chrX	-	7495	27	ISM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	53160	507	-648	-507	3prime_fragment	FALSE	canonical	3	146	junction_21	31.0765422672784	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAATAAAGACAAAAAAA	NA	False	NA	NA	False	AATATA	-28	NA	104919849	104841727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165
ES.37530.99	chrX	-	10123	37	NNC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	2	-507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	71.5613567351666	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAATAAAGACAAAAAAA	NA	False	NA	NA	False	AATATA	-28	NA	104972963	104841727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891335_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104954179_104954250_104955075_104955261_104972564
ES.37531.1	chrX	-	169	1	Intergenic	novelGene_30748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGATGTCATTTCC	NA	False	NA	NA	False	NA	NA	NA	104989245	104989076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104989100_104989200
ES.37532.1	chrX	-	177	1	Intergenic	novelGene_30749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAAAGTAGGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	104994523	104994346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_104994300_104994500
ES.37533.1	chrX	-	156	1	Intergenic	novelGene_30750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	105001537	105001381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105001400_105001500
ES.37534.1	chrX	-	175	1	Intergenic	novelGene_30751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	105003488	105003313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105003300_105003500
ES.37535.1	chrX	+	175	1	Intergenic	novelGene_30753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTCAGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	105032240	105032415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105032200_105032400
ES.37536.1	chrX	+	166	1	Intergenic	novelGene_30754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCACATCAATGC	NA	False	NA	NA	False	NA	NA	NA	105039961	105040127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105040000_105040100
ES.37537.1	chrX	-	4530	10	FSM	ENSMUSG00000031232.18	ENSMUST00000151689.9	4531	10	3	-2	3	2	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTTTTTTTATTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	105055509	105011687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.10	chrX	-	4481	11	NNC	ENSMUSG00000031232.18	novel	1608	11	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_2	93.150415994777	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACATGGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	105055383	105011693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105015086_105017790_105017882_105019693_105019777_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.11	chrX	-	4534	11	NNC	ENSMUSG00000031232.18	novel	1608	11	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_2	93.150415994777	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACATGGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	105055409	105011693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105015086_105017790_105017882_105018338_105018449_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.12	chrX	-	3558	10	FSM	ENSMUSG00000031232.18	ENSMUST00000151689.9	4531	10	-20	993	-20	-993	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAAGGCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	105055532	105012682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.13	chrX	-	2952	11	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	-4	-1017	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	66.0984871233828	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105055396	105012706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105014596_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.14	chrX	-	3080	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	-2	1037	-2	-1037	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105055507	105012726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.15	chrX	-	2907	11	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	10739	-1041	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	85.169771632898	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105044647	105012730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105044576
ES.37537.16	chrX	-	1821	11	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	7	263	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	66.0984871233828	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTTGTTTTCATTT	NA	False	NA	NA	False	TTTAAA	-23	NA	105055379	105013820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105014596_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.17	chrX	-	2312	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	79	2133	-34	261	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGCTCTTGTTTTCAT	NA	False	NA	NA	False	TTTAAA	-21	NA	105055426	105013822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.18	chrX	-	2383	10	NNC	ENSMUSG00000031232.18	novel	4524	10	NA	NA	0	260	intron_retention	FALSE	non_canonical	0	0	junction_3	74.0832031411596	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTCTTGTTTTCA	NA	False	NA	NA	False	TTTAAA	-20	NA	105055386	105013823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105015086_105017790_105017882_105023011_105023087_105027203_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.19	chrX	-	1562	9	ISM	ENSMUSG00000031232.18	ENSMUST00000113566.10	1608	11	19282	-260	19276	260	3prime_fragment	FALSE	canonical	3	21	junction_1	70.3504619743183	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTCTTGTTTTCA	NA	False	NA	NA	False	TTTAAA	-20	NA	105036110	105013823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003
ES.37537.2	chrX	-	4333	11	NNC	ENSMUSG00000031232.18	novel	4531	10	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_1	70.7856623900632	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055419	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105013947_105014051_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.20	chrX	-	1304	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	109	3111	-4	-717	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACTTCATTTTA	NA	False	NA	NA	False	TATAAA	-6	NA	105055396	105014800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.21	chrX	-	1125	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	91	3308	-22	-914	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTCACATATTTTATAT	NA	False	NA	NA	False	AATAAA	-23	NA	105055414	105014997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.22	chrX	-	1344	10	NNC	ENSMUSG00000031232.18	novel	4531	10	NA	NA	-150	-920	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	72.8971878744304	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCAACTCACATATT	NA	False	NA	NA	False	AATAAA	-17	NA	105055662	105015003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040575_105055267
ES.37537.23	chrX	-	175	1	Intergenic	novelGene_30752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGATCC	NA	False	NA	NA	False	NA	NA	NA	105016650	105016475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105016500_105016600
ES.37537.24	chrX	-	1034	8	NNC	ENSMUSG00000031232.18	novel	4524	10	NA	NA	-16	-6194	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	81.6523241605303	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGGGCAGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	105055408	105026418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105026588_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.25	chrX	-	1839	7	ISM	ENSMUSG00000031232.18	ENSMUST00000139421.3	1059	9	-99	6194	20	-6194	5prime_fragment	FALSE	canonical	3	195	junction_5	18.7616630392937	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGGGCAGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	105055485	105026418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.3	chrX	-	4105	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	10	0	10	0	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055495	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.4	chrX	-	4077	11	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	66.0984871233828	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055504	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105014596_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.5	chrX	-	4108	12	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	97.2139159510893	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055420	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105044576_105044655_105055267
ES.37537.6	chrX	-	3604	11	NNC	ENSMUSG00000031232.18	novel	4531	10	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_1	70.7856623900632	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055419	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105012837_105013670_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.7	chrX	-	4340	11	NNC	ENSMUSG00000031232.18	novel	4531	10	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	70.7856623900632	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055379	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105012540_105012597_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.8	chrX	-	3151	12	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.1332218336235	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055412	105011689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105012837_105013670_105014596_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ES.37537.9	chrX	-	4584	12	NNC	ENSMUSG00000031232.18	novel	1608	11	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_2	108.081924850267	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACATGGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	105055381	105011693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_105015086_105017790_105017882_105018338_105018449_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105044576_105044655_105055267
ES.37538.1	chrX	+	902	4	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	-3631	4	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	4079.11643482861	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTGTTTTTTTCCTTT	NA	False	NA	16	True	AATAAA	-28	NA	105055674	105065568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105056116_105059357_105059477_105063184_105063310_105065351
ES.37538.11	chrX	+	4170	2	FSM	ENSMUSG00000031231.5	ENSMUST00000155377.2	526	2	-3647	3	28	-3	multi-exon	FALSE	canonical	3	9427	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTAGGCTTTGTTTTT	NA	False	NA	9	True	AATAAA	-21	NA	105059349	105065561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105063310_105065351
ES.37538.12	chrX	+	3959	3	NNC	ENSMUSG00000031231.5	novel	526	2	NA	NA	28	0	intron_retention	FALSE	non_canonical	0	0	junction_1	4713.5	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059349	105065564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105062280_105062493_105063310_105065351
ES.37538.14	chrX	+	842	1	NIC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	45	473	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	105059366	105060208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105059400_105060200
ES.37538.15	chrX	+	1854	4	NNC	ENSMUSG00000031231.5	novel	526	2	NA	NA	58	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	4443.93041749706	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059379	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105059962_105062035_105062280_105062493_105063310_105065351
ES.37538.2	chrX	+	507	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	2	492	2	0	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059307	105065564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105059477_105063184_105063310_105065351
ES.37538.3	chrX	+	6029	2	NNC	ENSMUSG00000031231.5	novel	526	2	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059320	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105062280_105062493
ES.37538.4	chrX	+	2244	1	NIC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	8	1838	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAAAACTATTGACT	NA	False	NA	NA	False	AGTAAA	-37	NA	105059329	105061573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105059300_105061600
ES.37538.5	chrX	+	6229	1	NIC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	13	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059334	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105059300_105065600
ES.37538.6	chrX	+	2521	2	ISM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	29	493	13	-1	intron_retention	FALSE	canonical	3	7724	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059334	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105059477_105063184
ES.37538.7	chrX	+	4154	2	NNC	ENSMUSG00000031231.5	novel	526	2	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059337	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105059964_105062035
ES.37538.8	chrX	+	956	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	43	2	27	-2	multi-exon	FALSE	canonical	3	7724	junction_1	851.5	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGGGTTTAAAGTGAT	NA	False	NA	NA	False	AATAAA	-12	NA	105059348	105066054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105059477_105063184_105063310_105065351
ES.37538.9	chrX	+	482	3	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	3860.5	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGGCTTTGTTTTTTT	NA	False	NA	11	True	AATAAA	-23	NA	105059348	105065563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105059477_105063184_105063310_105065334
ES.37539.1	chrX	-	5169	1	Antisense	novelGene_ENSMUSG00000031231.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAAGTGACACGTGGAC	2667	False	NA	NA	False	AATAAA	-2	NA	105067446	105062277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_105062300_105067400
ES.37539.2	chrX	-	2786	2	Antisense	novelGene_ENSMUSG00000031231.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGATAAAGTGACACG	2666	False	NA	NA	False	AAAAAG	-4	NA	105067447	105062282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_105062396_105064774
ES.3754.1	chr10	+	173	1	Intergenic	novelGene_2854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	115013103	115013276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115013100_115013300
ES.37540.1	chrX	+	7940	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	-122	-2952	-76	2952	multi-exon	TRUE	canonical	2	29	junction_4	14.4839609212032	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105070805	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.11	chrX	+	2706	9	ISM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	0	26863	0	-20255	5prime_fragment	FALSE	canonical	3	41	junction_4	14.4216633922721	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCTAAATTATCTCC	NA	False	NA	NA	False	AATAAA	-7	NA	105070881	105141660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995
ES.37540.12	chrX	+	7936	24	NNC	ENSMUSG00000033792.13	novel	4900	23	NA	NA	2	2952	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.5807745855964	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105070883	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142117_105142195_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.13	chrX	+	8145	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	-44	-3235	2	3235	multi-exon	FALSE	canonical	2	29	junction_4	14.4839609212032	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTTGCTTGATTTGGG	NA	False	NA	NA	False	AATAAA	-26	NA	105070883	105171767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.14	chrX	+	7852	23	NNC	ENSMUSG00000033792.13	novel	4900	23	NA	NA	10	2952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.2410223779497	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105070891	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141216_105142384_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.17	chrX	+	4456	21	ISM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	36	2902	36	-421	5prime_fragment	FALSE	canonical	2	29	junction_4	14.4761873433581	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTATATATAATAATACT	NA	False	NA	NA	False	AATAAA	-17	NA	105070963	105165630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195
ES.37540.18	chrX	+	177	1	Intergenic	novelGene_30755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATTATATTTGT	1474	False	NA	NA	False	NA	NA	NA	105081693	105081870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105081700_105081900
ES.37540.23	chrX	+	5856	16	NNC	ENSMUSG00000033792.13	novel	4866	23	NA	NA	-12079	2952	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	27.2897213047127	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105138458	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105138621_105140382_105140460_105140995_105141216_105142384_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105165195_105165314_105166948_105167052_105167944
ES.37540.24	chrX	+	5133	11	ISM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	75022	-2942	-4588	2942	3prime_fragment	FALSE	canonical	3	62	junction_9	9.14822387133153	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGTCAAG	5194	False	NA	NA	False	NA	NA	NA	105145949	105171474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.26	chrX	+	4977	5	NNC	ENSMUSG00000033792.13	novel	4866	23	NA	NA	3095	2952	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5063399971657	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105161937	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105162001_105163840_105164506_105164707_105165314_105166948_105167052_105167944
ES.37540.3	chrX	+	5713	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	-45	-768	-45	759	multi-exon	FALSE	canonical	2	41	junction_4	12.997138909572	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACTTATCAAAATGAC	NA	False	NA	NA	False	AATAAA	-21	NA	105070836	105169291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.5	chrX	+	7770	22	NIC	ENSMUSG00000033792.13	novel	4866	23	NA	NA	-44	2952	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.6803772822245	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105070837	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105070986_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.6	chrX	+	7768	22	NIC	ENSMUSG00000033792.13	novel	4866	23	NA	NA	-39	2952	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	20.7997688806277	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCAAGTGTCGCTGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	105070842	105171484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37540.7	chrX	+	7945	24	NNC	ENSMUSG00000033792.13	novel	4900	23	NA	NA	-30	2942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.6761387543197	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	105070851	105171474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105070986_105113375_105113514_105124289_105124354_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ES.37541.1	chrX	-	1897	1	Antisense	novelGene_ENSMUSG00000033792.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGCTGGGCTGTAGCT	NA	False	NA	NA	False	AAGAAA	-43	NA	105136690	105134793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_105134800_105136700
ES.37542.1	chrX	-	158	1	Intergenic	novelGene_30756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105139210	105139052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105139100_105139200
ES.37543.1	chrX	-	131	1	Intergenic	novelGene_30757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	105174254	105174123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105174100_105174300
ES.37544.1	chrX	+	231	1	Intergenic	novelGene_30758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGTCTAGGGCAGCTGC	NA	False	NA	NA	False	NA	NA	NA	105219678	105219909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105219700_105219900
ES.37545.1	chrX	-	203	1	Intergenic	novelGene_30759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAAGTCTTGCTATATA	NA	False	NA	NA	False	NA	NA	NA	105223843	105223640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105223600_105223800
ES.37546.1	chrX	+	1874	12	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	-298	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1377.78018854021	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTGTCATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	105230407	105247303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230628_105230874_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.10	chrX	+	2068	10	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	58	2	-5	-2	intron_retention	FALSE	canonical	3	4366	junction_7	267.116888456656	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTGTCATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	105230763	105247303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442
ES.37546.11	chrX	+	3853	10	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	2	-9	intron_retention	FALSE	canonical	3	3907	junction_9	363.650252540596	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAAGTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	105230770	105247296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105246223_105246442_105246542_105246844
ES.37546.12	chrX	+	3382	9	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	2	-8	intron_retention	FALSE	non_canonical	0	0	junction_6	1590.604975316	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAAGTTTTTCCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	105230770	105247297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241993_105242570_105243368_105243762_105243943_105246044
ES.37546.13	chrX	+	1743	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1426.49566771161	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGAAGTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-10	NA	105230771	105247295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246448_105246542_105246844
ES.37546.14	chrX	+	1557	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1441.18720505006	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAAGTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	105230776	105247296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246475_105246965
ES.37546.16	chrX	+	1856	9	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_6	1590.37275013595	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTGTCATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	105230777	105247303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243762_105243943_105246044_105246542_105246844
ES.37546.19	chrX	+	3934	9	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	12	-2	intron_retention	FALSE	canonical	3	3907	junction_8	388.029879648462	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTGTCATACTT	NA	False	NA	NA	False	AATAAA	-18	NA	105230780	105247303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105230922_105235612_105235664_105237961_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.2	chrX	+	1835	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	-6	-4	-6	4	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCATACTTTGTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	105230699	105247309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.20	chrX	+	1757	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1443.65994957261	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAAGTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	105230780	105247296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243959_105246044_105246223_105246442_105246542_105246844
ES.37546.21	chrX	+	1490	10	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	12	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1495.24944035732	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGGAAGTTTTTCC	NA	False	NA	NA	False	AATAAA	-8	NA	105230780	105247293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238030_105240463_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.23	chrX	+	2735	5	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	5954	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	1841.87463946383	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTTTTTCCTGTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	105241187	105247300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105241993_105242570_105243368_105243762_105243943_105246044_105246542_105246844
ES.37546.24	chrX	+	1539	1	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	7782	-2713	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	883	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAGATAATCAGAGT	NA	False	NA	NA	False	ATTAAA	-10	NA	105243015	105244554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105243000_105244600
ES.37546.3	chrX	+	3313	10	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	6	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	1521.32873209938	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTTTTTCCTGTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	105230711	105247300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241992_105242572_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.4	chrX	+	1358	8	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	16	3076	16	-3038	5prime_fragment	FALSE	canonical	3	4366	junction_7	268.388007274877	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTTTTTCAGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	105230721	105244229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762
ES.37546.5	chrX	+	3135	3	ISM	ENSMUSG00000062070.13	ENSMUST00000135949.2	1764	11	-45	6420	18	2465	intron_retention	FALSE	canonical	3	4858	junction_2	19.5	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAAAGCTTGTCTTGTA	NA	False	NA	NA	False	GATAAA	-14	NA	105230723	105240847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_105230922_105235612_105235664_105237961
ES.37546.6	chrX	+	1782	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1426.49566771161	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAAGTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	105230730	105247296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246214_105246442_105246542_105246844
ES.37546.7	chrX	+	1748	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	-14	-10	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_7	1433.48149621821	893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGAAGTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-10	NA	105230754	105247295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243350_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.8	chrX	+	2868	11	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	-8	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1444.19922794606	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGAAGTTTTTCCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	105230760	105247296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241993_105242570_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ES.37546.9	chrX	+	2095	9	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	-5	-12	intron_retention	FALSE	canonical	3	3907	junction_8	378.007089053896	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGGAAGTTTTTCC	NA	False	NA	NA	False	AATAAA	-8	NA	105230763	105247293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_105230922_105235612_105235664_105237961_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246542_105246844
ES.37547.1	chrX	-	3141	1	Intergenic	novelGene_30760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATACATTATGAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	105234917	105231776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105231800_105234900
ES.37548.1	chrX	-	3585	7	FSM	ENSMUSG00000047242.15	ENSMUST00000055497.15	2633	7	-945	-7	-96	7	multi-exon	FALSE	canonical	3	7	junction_1	4.34613493680177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTCATTTCTTGGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	105264452	105250481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184
ES.37548.2	chrX	-	958	8	FSM	ENSMUSG00000047242.15	ENSMUST00000113495.9	2512	8	-31	1585	-31	-1585	multi-exon	FALSE	canonical	2	3	junction_7	5.73211504221111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTTGTGTGTTTGGG	NA	False	NA	NA	False	AATAAA	-19	NA	105264795	105252073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184_105263305_105264682
ES.37549.1	chrX	-	4583	27	NIC	ENSMUSG00000033737.15	novel	4859	27	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.504418348023231	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTTGTGTATGTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	105529005	105463646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_105464402_105465279_105465402_105468278_105468446_105468786_105469000_105469287_105469563_105474892_105475043_105476038_105476153_105476363_105476471_105476888_105476992_105477113_105477233_105477868_105477941_105478555_105478695_105479926_105480014_105481223_105481399_105481483_105481606_105482225_105482280_105482813_105482953_105486206_105486267_105487764_105487905_105488189_105488246_105489098_105489804_105490977_105491249_105492823_105492901_105516256_105516333_105516673_105516788_105517436_105517554_105528951
ES.3755.1	chr10	-	6028	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	-2318	42	2318	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGAGTTGGTTCCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	115087330	115031458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.11	chr10	-	6907	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	-587	intron_retention	FALSE	canonical	3	391	junction_15	41.1952532324889	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTTTCAGTTAC	NA	False	NA	-2	True	ATTAAA	-14	NA	115087330	115034363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.12	chr10	-	3108	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	49	-587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.668226254925	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTTTCAGTTAC	NA	False	NA	-2	True	ATTAAA	-14	NA	115087323	115034363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044892_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.14	chr10	-	4550	18	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	-588	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	150.945073536414	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087330	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115050775_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.15	chr10	-	6220	3	ISM	ENSMUSG00000020130.10	ENSMUST00000217843.2	1641	12	13763	-936	1743	-588	3prime_fragment	FALSE	canonical	3	504	junction_2	20	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115043850	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115035670_115038408_115038496_115039022
ES.3755.16	chr10	-	5516	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	-588	intron_retention	FALSE	canonical	3	391	junction_15	43.4337298523727	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087330	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.17	chr10	-	3649	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	-588	intron_retention	FALSE	canonical	3	391	junction_15	42.4733118819597	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087330	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.18	chr10	-	2698	14	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	10304	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.498076323751	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115076854	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035492_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753
ES.3755.20	chr10	-	4298	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	40	-588	intron_retention	FALSE	canonical	3	391	junction_15	42.0330029064464	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087332	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.21	chr10	-	3195	18	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	40	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	154.737169728226	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087332	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115079550_115079622_115087286
ES.3755.22	chr10	-	3236	18	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	-588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	153.553637935359	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087330	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115074523_115074638_115075176_115075252_115076753_115076853_115087286
ES.3755.23	chr10	-	3482	7	ISM	ENSMUSG00000020130.10	ENSMUST00000217843.2	1641	12	7344	-936	-4676	-588	3prime_fragment	FALSE	canonical	3	420	junction_4	38.2390143992	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115050269	115034364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595
ES.3755.24	chr10	-	3020	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	40	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.709919571229	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTGCATGTTTTTAAG	NA	False	NA	-103	True	AATGAA	-16	NA	115087332	115034464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065033_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.25	chr10	-	2821	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	-2	933	-2	591	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTTAACTGAACATTT	NA	False	NA	NA	False	AATATA	-18	NA	115087374	115034709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.26	chr10	-	3240	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	557	intron_retention	FALSE	canonical	3	391	junction_15	43.9676648863179	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGGCTTCAATATAAGA	NA	False	NA	NA	False	AATAAA	-41	NA	115087330	115034743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.27	chr10	-	3249	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	536	intron_retention	FALSE	canonical	3	391	junction_15	42.4733118819597	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTGATTCAACAAAATTA	NA	False	NA	NA	False	AATAAA	-20	NA	115087330	115034764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.28	chr10	-	4391	15	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	534	intron_retention	FALSE	canonical	3	391	junction_14	43.5023457026475	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCTGATTCAACAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	115087330	115034766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115055186_115056115_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.29	chr10	-	3193	16	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	45	534	intron_retention	FALSE	canonical	0	0	junction_6	122.571267251161	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCTGATTCAACAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	115087327	115034766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048616_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.3	chr10	-	4631	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	-20	-859	-20	859	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGGTCTGCATTATC	NA	False	NA	NA	False	ATTAAA	-21	NA	115087392	115032917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.30	chr10	-	6211	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	534	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	115.805315481415	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCTGATTCAACAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	115087330	115034766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.32	chr10	-	3738	7	ISM	ENSMUSG00000020130.10	ENSMUST00000217843.2	1641	12	6547	-395	-5473	395	3prime_fragment	FALSE	canonical	3	420	junction_4	38.2390143992	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAACTGGATTGGCAGTCT	NA	False	NA	NA	False	GATAAA	-17	NA	115051066	115034905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595
ES.3755.33	chr10	-	2579	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	1131	42	393	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAACTGGATTGGCAGT	NA	False	NA	NA	False	GATAAA	-15	NA	115087330	115034907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.34	chr10	-	2472	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	19	1261	19	263	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAAATTTGGCTTTT	NA	False	NA	NA	False	TATAAA	-45	NA	115087353	115035037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.35	chr10	-	2228	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	0	1524	0	0	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115087372	115035300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.36	chr10	-	2012	15	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	125.234983213191	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115087330	115035300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115087286
ES.3755.37	chr10	-	2179	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	117.714946348159	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115087332	115035300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065232_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.39	chr10	-	5707	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	115.805315481415	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATTTTTGTAGTTACT	NA	False	NA	-3	True	ATTAAA	-20	NA	115087361	115035301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.4	chr10	-	4724	3	ISM	ENSMUSG00000020130.10	ENSMUST00000217843.2	1641	12	16696	-2373	4676	849	3prime_fragment	FALSE	canonical	3	504	junction_2	20	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTGTACTTTCTTGGT	NA	False	NA	NA	False	ATTAAA	-11	NA	115040917	115032927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115035670_115038408_115038496_115039022
ES.3755.40	chr10	-	7980	5	NIC	ENSMUSG00000020130.10	novel	1641	12	NA	NA	-2060	-6	intron_retention	FALSE	canonical	3	420	junction_3	44.8964085423322	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTAATTATTTTTGTAG	NA	False	NA	-8	True	ATTAAA	-15	NA	115047653	115035306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115044900_115045461_115045562_115046100
ES.3755.41	chr10	-	2937	11	NNC	ENSMUSG00000020130.10	novel	492	5	NA	NA	-27	-6142	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	134.870493437223	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTAGTGGCTTTTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	115087399	115050532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.42	chr10	-	2818	10	NNC	ENSMUSG00000020130.10	novel	492	5	NA	NA	12	-6147	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	177.270735261765	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATATTCTAGTGGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	115087360	115050537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115076753_115076853_115087286
ES.3755.5	chr10	-	3710	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	42	0	42	0	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCATTTCTTTGGAGCGC	NA	False	NA	NA	False	ACTAAA	-3	NA	115087330	115033776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.6	chr10	-	3230	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	-37	559	-37	-559	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACGGCTGCTTCTTCA	NA	False	NA	26	True	ATTAAA	-42	NA	115087409	115034335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.7	chr10	-	6028	15	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	29	-586	intron_retention	FALSE	canonical	3	391	junction_14	44.9535474525807	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTTTTCAGTTACA	NA	False	NA	-1	True	ATTAAA	-15	NA	115087343	115034362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.3755.8	chr10	-	3635	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	27	-587	intron_retention	FALSE	canonical	3	391	junction_15	43.9676648863179	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTTTCAGTTAC	NA	False	NA	-2	True	ATTAAA	-14	NA	115087345	115034363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ES.37550.1	chrX	+	252	1	Intergenic	novelGene_30761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTAGTTGTGTCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	105648200	105648452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105648200_105648500
ES.37551.1	chrX	+	175	1	Intergenic	novelGene_30762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAAAAGCAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	105934675	105934850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_105934700_105934800
ES.37552.1	chrX	-	207	1	Intergenic	novelGene_30763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGAGAGTCAGTATT	NA	False	NA	NA	False	NA	NA	NA	105960121	105959914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_105959900_105960100
ES.37553.1	chrX	+	4230	3	FSM	ENSMUSG00000049929.8	ENSMUST00000060576.8	4238	3	7	1	7	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTTGGTCAGTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	105964237	105977505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_105964596_105967683_105967786_105973735
ES.37554.1	chrX	-	193	1	Intergenic	novelGene_30764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGTTCCAT	1476	False	NA	NA	False	NA	NA	NA	106010406	106010213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_106010200_106010400
ES.37555.1	chrX	-	1663	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	-16	97	-16	-97	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATTTTCATCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	106446998	106440801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
ES.37556.1	chrX	-	173	1	Intergenic	novelGene_30765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAATAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	106662188	106662015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_106662000_106662200
ES.37557.1	chrX	-	199	1	Intergenic	novelGene_30766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106696562	106696363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_106696400_106696600
ES.37558.1	chrX	-	5793	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	44	5	44	-5	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGGCTGTACTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	106859896	106826361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ES.37558.2	chrX	-	4891	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	-17	968	-17	-968	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTGTAATAAGCTTTG	NA	False	NA	NA	False	NA	NA	NA	106859957	106827324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ES.37558.3	chrX	-	4353	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	40	1449	40	-1449	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTCCTACTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	106859900	106827805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ES.37558.4	chrX	-	1219	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	30	4593	30	493	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTTCGCATAACCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	106859910	106830949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ES.37559.1	chrX	-	174	1	Intergenic	novelGene_30767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAATTAGGA	NA	False	NA	NA	False	NA	NA	NA	107641402	107641228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_107641200_107641400
ES.3756.1	chr10	-	177	1	Intergenic	novelGene_2855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACCCGGAGGTTCA	NA	False	NA	NA	False	NA	NA	NA	115112380	115112203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_115112200_115112400
ES.37560.1	chrX	-	6434	2	NNC	ENSMUSG00000063663.12	novel	5740	38	NA	NA	91023	2067	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATATGTGACTACCA	NA	False	NA	NA	False	NA	NA	NA	107786923	107778554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_107778567_107780501
ES.37560.10	chrX	-	10575	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	-27	1071	-3	-1071	multi-exon	FALSE	canonical	2	5	junction_33	5.32822672190289	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCACTCTCGCTGCT	NA	False	NA	-13	True	AATAAA	-19	NA	107877981	107781692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.12	chrX	-	6083	4	NIC	ENSMUSG00000063663.12	novel	5740	38	NA	NA	81383	-1074	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	8.52447456836295	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCAGTTGCACTCTCGCT	NA	False	NA	-16	True	AATAAA	-16	NA	107796563	107781695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_107787377_107793836_107793935_107794294_107794459_107796423
ES.37560.13	chrX	-	7544	18	NNC	ENSMUSG00000063663.12	novel	5740	38	NA	NA	66337	-1076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.61078075157002	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATCAGTTGCACTCTCG	4781	False	NA	-18	True	AATAAA	-14	NA	107811609	107781697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_107787377_107792888_107793042_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554
ES.37560.14	chrX	-	4434	1	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	91668	1231	91660	-1231	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAAAGGTAAACAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	107786286	107781852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_107781900_107786300
ES.37560.15	chrX	-	5126	7	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	78821	2387	78813	-2387	3prime_fragment	FALSE	canonical	2	6	junction_6	7.38805341976717	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGCAAGTTTGTGG	NA	False	NA	NA	False	AATAAA	-18	NA	107799133	107783008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021
ES.37560.16	chrX	-	8778	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	15	2826	7	2726	multi-exon	FALSE	canonical	2	5	junction_33	5.32822672190289	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGTCTACCAATTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	107877939	107783447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.17	chrX	-	6442	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	6	5171	-2	381	multi-exon	FALSE	canonical	2	5	junction_33	5.32822672190289	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGCATCCATTTTTC	NA	False	NA	4	True	NA	NA	NA	107877948	107785792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.19	chrX	-	4787	27	NIC	ENSMUSG00000063663.12	novel	5740	38	NA	NA	44478	354	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	5.19672177047832	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTAGACAAGGTGCCAAA	NA	False	NA	-23	True	ATTAAA	-20	NA	107833468	107785819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_107787377_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338
ES.37560.2	chrX	-	12735	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	53	-1169	45	1169	multi-exon	TRUE	canonical	2	5	junction_33	5.32822672190289	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTGTCGACTCTCATT	NA	False	NA	4	True	AATATA	-19	NA	107877901	107779452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.20	chrX	-	6168	41	NNC	ENSMUSG00000063663.12	novel	11619	41	NA	NA	1	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.66811256063251	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACGATCTGGATTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	107877951	107786063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_107787377_107792888_107793042_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.21	chrX	-	4116	29	ISM	ENSMUSG00000063663.12	ENSMUST00000041866.12	5839	39	43133	595	43101	-595	3prime_fragment	FALSE	canonical	2	6	junction_6	5.35666664550076	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTGTTTTATATAATGA	NA	False	NA	NA	False	ATTAAA	-19	NA	107834845	107786768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750
ES.37560.22	chrX	-	3143	1	Intergenic	novelGene_30768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCACAAACAAACA	NA	False	NA	NA	False	AAAACA	-23	NA	107853746	107850603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_107850600_107853700
ES.37560.5	chrX	-	6545	44	NNC	ENSMUSG00000063663.12	novel	11619	41	NA	NA	16	169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.05911030922185	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTGACTTTTCTCGT	NA	False	NA	NA	False	AATAAA	-35	NA	107877930	107780452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_107781512_107782312_107782408_107786678_107786816_107786962_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ES.37560.6	chrX	-	4067	1	Genic_Genomic	ENSMUSG00000063663.12	novel	NA	NA	NA	NA	93427	169	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTGACTTTTCTCGT	NA	False	NA	NA	False	AATAAA	-35	NA	107784519	107780452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_107780500_107784500
ES.37560.7	chrX	-	7631	9	ISM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	76797	0	76789	0	3prime_fragment	FALSE	canonical	2	6	junction_6	6.7349368965121	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTGAGTTAATTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	107801157	107780621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125
ES.37560.8	chrX	-	11395	41	NNC	ENSMUSG00000063663.12	novel	11619	41	NA	NA	79	-139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	5.61643792808218	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATTCAGAAGATTG	NA	False	NA	NA	False	ATTAAA	-23	NA	107877867	107780760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877575_107877704
ES.37561.1	chrX	+	467	5	NIC	ENSMUSG00000086629.9	novel	747	4	NA	NA	1	-379	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.29903810567666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATGTGTTCTTTGTGC	NA	False	NA	NA	False	ACTAAA	-19	NA	107878270	107917997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_107878292_107879871_107879962_107901873_107901979_107915077_107915205_107917873
ES.37561.2	chrX	+	532	3	FSM	ENSMUSG00000086629.9	ENSMUST00000131640.8	546	3	20	-6	-2	-1	multi-exon	FALSE	canonical	3	8	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAATCTCTATTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	107878282	107930295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_107878380_107879871_107879962_107929950
ES.37561.3	chrX	+	945	6	NNC	ENSMUSG00000086629.9	novel	1005	5	NA	NA	-1	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.95580467734555	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAATGAATATAATTATA	NA	False	NA	NA	False	AATAAA	-28	NA	107878283	107930514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_107878380_107879871_107879962_107899060_107899101_107899485_107899536_107901873_107901979_107929950
ES.37561.4	chrX	+	2135	4	NNC	ENSMUSG00000086629.9	novel	852	4	NA	NA	-1	3428	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.63299316185545	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	107878283	107933930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_107878380_107879834_107879962_107930759_107930863_107932121
ES.37561.5	chrX	+	2327	4	NNC	ENSMUSG00000086629.9	novel	1107	3	NA	NA	1	3428	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_3	2.05480466765633	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	107878285	107933930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_107878611_107879871_107879962_107930759_107930863_107932121
ES.37562.1	chrX	+	180	1	Intergenic	novelGene_30769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAGTGCAGGAA	NA	False	NA	NA	False	NA	NA	NA	107995268	107995448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_107995300_107995400
ES.37563.1	chrX	+	176	1	Intergenic	novelGene_30770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATGTGACACA	NA	False	NA	NA	False	NA	NA	NA	108014077	108014253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_108014100_108014300
ES.37564.1	chrX	+	175	1	ISM	ENSMUSG00000086629.9	ENSMUST00000124329.2	1660	3	71138	208	71138	-208	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAGAGCTGATGA	NA	False	NA	NA	False	NA	NA	NA	108018129	108018304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_108018100_108018300
ES.37565.1	chrX	-	3472	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	9	-1547	9	1547	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACTAGAGGTATTAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	108057001	108046592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ES.37565.2	chrX	-	2440	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	-507	1	-507	-1	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGTTTGCAATATTTC	NA	False	NA	0	True	AATAAA	-18	NA	108057517	108048140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ES.37565.3	chrX	-	1821	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	11	102	11	-102	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAAATTTGAATGTTTA	NA	False	NA	-101	True	TATAAA	-17	NA	108056999	108048241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ES.37566.1	chrX	-	198	1	Intergenic	novelGene_30771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTGCTTGTAGCAGA	NA	False	NA	NA	False	NA	NA	NA	108123087	108122889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_108122900_108123100
ES.37567.1	chrX	+	2962	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	-83	3	-83	-3	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGATTACTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	108138887	108206074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ES.37567.3	chrX	+	3594	1	NIC	ENSMUSG00000031246.15	novel	2882	4	NA	NA	44905	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGATTACTTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	108202482	108206076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_108202500_108206100
ES.37568.1	chrX	-	160	1	Intergenic	novelGene_30772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108709844	108709684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_108709700_108709800
ES.37569.1	chrX	-	177	1	Intergenic	novelGene_30773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCATTTCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	109805251	109805074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_109805100_109805300
ES.3757.1	chr10	+	214	1	Intergenic	novelGene_2856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCAATTCCCAACAA	NA	False	NA	NA	False	NA	NA	NA	115121917	115122131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115121900_115122100
ES.37570.1	chrX	+	213	2	Intergenic	novelGene_30774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCCTTGGTCATGATG	NA	False	NA	NA	False	AAAAAG	-21	NA	110212756	110246959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_110212925_110246914
ES.37570.2	chrX	+	180	1	Intergenic	novelGene_30775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	110212757	110212937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_110212800_110212900
ES.37571.1	chrX	-	209	1	Intergenic	novelGene_30776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGGTTATTTCATGA	NA	False	NA	NA	False	NA	NA	NA	110291735	110291526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_110291500_110291700
ES.37572.1	chrX	+	5888	1	Intergenic	novelGene_30777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAATAACAACAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	110332215	110338103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_110332200_110338100
ES.37573.1	chrX	-	7719	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	86	3578	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGACCTTGCTTGATC	NA	False	NA	NA	False	AATAAA	-25	NA	110373066	110294310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.12	chrX	-	4307	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373232	110297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.13	chrX	-	4293	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373203	110297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.14	chrX	-	6243	4	ISM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	58715	0	58159	0	3prime_fragment	FALSE	canonical	3	352	junction_3	24.0046291831851	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110314177	110297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904
ES.37573.15	chrX	-	3882	20	NNC	ENSMUSG00000025665.17	novel	4151	23	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.903866938041	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110373158	110297888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342383_110359988_110360052_110372546_110372796_110372967
ES.37573.2	chrX	-	7698	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	28	-3575	28	3575	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTTGACCTTGCTTG	NA	False	NA	NA	False	AATAAA	-22	NA	110372864	110294313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.20	chrX	-	4204	23	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	33	junction_21	86.7646669907545	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110373178	110297889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110372546_110372799_110372967
ES.37573.21	chrX	-	3607	25	NNC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.0672446906985	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110373162	110297889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110298225_110298868_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.24	chrX	-	3892	23	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	81	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	88.887023195526	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATCATTTAGTCTTGGT	NA	False	NA	-11	True	ATTAAA	-26	NA	110372255	110297893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372148
ES.37573.27	chrX	-	4106	23	NNC	ENSMUSG00000025665.17	novel	4151	23	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.7786678513231	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110372873	110297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319660_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.28	chrX	-	3965	22	NIC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	31	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	89.4213699620828	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110372861	110297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.3	chrX	-	6176	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	-36	-2005	-36	2004	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTAGTGGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	110372928	110295884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.30	chrX	-	3834	23	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	-53	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	88.887023195526	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110372389	110297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372337
ES.37573.31	chrX	-	3697	24	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	24	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.241270044863	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATCATTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-23	NA	110372868	110297896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110297977_110298383_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.33	chrX	-	4069	23	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	40	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.2178836424665	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGCATCATTTAGTCT	NA	False	NA	-15	True	ATTAAA	-22	NA	110372852	110297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319660_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.36	chrX	-	4083	23	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	-25	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	90.1082567464508	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGCATCATTTAGTCT	NA	False	NA	-15	True	ATTAAA	-22	NA	110372827	110297897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319174_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.38	chrX	-	3380	16	NNC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	109	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	109.157867329845	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACAGCATCATTTAGT	NA	False	NA	-17	True	ATTAAA	-20	NA	110373043	110297899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323572_110359988_110360052_110372546_110372799_110372967
ES.37573.39	chrX	-	2245	6	NNC	ENSMUSG00000025665.17	novel	2410	22	NA	NA	57463	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	151.543261150076	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACAGCATCATTTAGT	NA	False	NA	-17	True	ATTAAA	-20	NA	110314873	110297899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110314826
ES.37573.41	chrX	-	4039	23	NNC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	-24	-106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	89.6896047856805	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCCTACATGTGATAT	NA	False	NA	-113	True	NA	NA	NA	110372916	110297995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344952_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.42	chrX	-	4184	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-73	-130	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGTCCATGCACAA	NA	False	NA	NA	False	AATAAA	-33	NA	110373225	110298019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.45	chrX	-	4095	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-6	-137	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGTGATCCTTGTCCA	NA	False	NA	NA	False	AATAAA	-26	NA	110373158	110298026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.46	chrX	-	3809	22	NIC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	-24	-137	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	91.3472356468298	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGTGATCCTTGTCCA	NA	False	NA	NA	False	AATAAA	-26	NA	110372826	110298026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.48	chrX	-	4068	24	NNC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	1	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	105.891926930413	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGTGATCCTTGTCCA	NA	False	NA	NA	False	AATAAA	-26	NA	110372891	110298026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110335635_110335692_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.5	chrX	-	4484	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	59	316	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTGTTAAAAACATCAT	NA	False	NA	NA	False	NA	NA	NA	110373093	110297572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.50	chrX	-	3927	24	NNC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	103	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	80.9832067354516	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTGTAAGTGATCCT	NA	False	NA	NA	False	AATAAA	-20	NA	110373049	110298032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372778_110373014
ES.37573.52	chrX	-	3884	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-50	-392	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGTAATGTGTATTA	NA	False	NA	NA	False	AATAAA	-38	NA	110373202	110298281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.53	chrX	-	3898	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-49	-392	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGTAATGTGTATTA	NA	False	NA	NA	False	AATAAA	-38	NA	110373201	110298281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.55	chrX	-	3647	22	NIC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	31	-394	combination_of_known_junctions	FALSE	canonical	2	33	junction_21	83.6555132550102	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTGTGTAATGTGTAT	NA	False	NA	NA	False	AATAAA	-36	NA	110372861	110298283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110372546
ES.37573.6	chrX	-	4600	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-42	316	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTGTTAAAAACATCAT	NA	False	NA	NA	False	NA	NA	NA	110373194	110297572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
ES.37573.60	chrX	-	2937	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	-47	1261	-47	327	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATGGTTTAGGAATT	NA	False	NA	NA	False	AATAAA	-27	NA	110372939	110299149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.61	chrX	-	2577	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	35	1523	35	64	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTTCTTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	110372857	110299412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.62	chrX	-	1552	14	ISM	ENSMUSG00000025665.17	ENSMUST00000137712.9	2410	22	45964	-62	45498	62	3prime_fragment	FALSE	canonical	3	237	junction_4	43.6302376011877	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTTTGTTTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	110326838	110299414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794
ES.37573.8	chrX	-	4221	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	35	-121	35	120	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTGCTCTTGTCATGA	NA	False	NA	NA	False	TTTAAA	-23	NA	110372857	110297768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ES.37573.9	chrX	-	4545	26	NNC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	-51	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	123.824495153423	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGTGTAGTATTTTG	NA	False	NA	0	True	ATTAAA	-37	NA	110373203	110297882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110370923_110370976_110371738_110371933_110372546_110372799_110372967
ES.37574.1	chrX	+	223	1	Intergenic	novelGene_30778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTTGGAGTAA	NA	False	NA	NA	False	NA	NA	NA	110548071	110548294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_110548100_110548300
ES.37575.1	chrX	-	9403	9	FSM	ENSMUSG00000034551.13	ENSMUST00000038472.7	9385	9	-6	-12	-6	10	multi-exon	FALSE	canonical	1	2	junction_8	2.9474565306379	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTTTTCTTTGTG	NA	False	NA	NA	False	AATAAA	-29	NA	110606782	110479617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110606663
ES.37575.2	chrX	-	2033	2	NNC	ENSMUSG00000034551.13	novel	9385	9	NA	NA	120237	-4776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTGGGTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	110486539	110484405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_110485529_110485629
ES.37575.3	chrX	-	2761	9	FSM	ENSMUSG00000034551.13	ENSMUST00000038472.7	9385	9	-38	6662	-38	-6662	multi-exon	FALSE	canonical	1	2	junction_8	2.9474565306379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACACTTTTAATCTCA	NA	False	NA	NA	False	CATAAA	-14	NA	110606814	110486291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110606663
ES.37576.1	chrX	+	1344	4	Intergenic	novelGene_30779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTGTCTGTGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	110697547	110736304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_110697854_110698087_110698135_110733463_110733539_110735388
ES.37577.1	chrX	+	5683	15	Fusion	ENSMUSG00000109156.2_ENSMUSG00000034555.15	novel	570	5	NA	NA	3539	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATTGTGCAGTGTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	110804624	111037022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_110804770_110806454_110806529_110808199_110808310_110850920_110851085_110854679_110854719_110873236_110873437_110877330_110877419_110920683_110920726_110928044_110928165_110978111_110978196_111002139_111002250_111002675_111004073_111007844_111007935_111028472_111030914_111036443
ES.37578.1	chrX	+	1348	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	14	-3	0	3	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGTTTATTTATTTT	NA	False	NA	10	True	AATAAA	-23	NA	111221044	111282455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ES.37578.2	chrX	+	1016	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	19	324	5	1	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGTGGTAAAATCATAAA	NA	False	NA	9	True	AATAAA	-17	NA	111221049	111282128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ES.37578.3	chrX	+	1055	9	NNC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.460057417293	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATACAAGTGGTAAAATCA	NA	False	NA	5	True	AATAAA	-13	NA	111221049	111282124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_111221134_111243454_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ES.37578.6	chrX	+	867	8	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	147.515063222544	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAGTGGTAAAATCATA	NA	False	NA	7	True	AATAAA	-15	NA	111221082	111282126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111274158_111274268_111281890
ES.37578.7	chrX	+	876	8	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	139.560973434992	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAGTGGTAAAATCATA	NA	False	NA	7	True	AATAAA	-15	NA	111221082	111282126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_111221134_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ES.37579.1	chrX	-	170	1	Intergenic	novelGene_30780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	111234129	111233959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_111234000_111234100
ES.3758.1	chr10	-	4867	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	358	-623	358	623	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGAGCCACTGTGTGGG	NA	False	NA	NA	False	NA	NA	NA	115151138	115122365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.10	chr10	-	3902	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-4	704	-1	-704	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAATGCTATACCCCA	NA	False	NA	NA	False	AATAAA	-15	NA	115151500	115123692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.11	chr10	-	3876	7	NNC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	14	-705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	168.046041971307	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGAATGCTATACCCC	NA	False	NA	NA	False	AATAAA	-14	NA	115151482	115123693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137529_115138636_115138697_115151098
ES.3758.12	chr10	-	3712	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-20	910	-17	-910	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTGGTGTTAG	NA	False	NA	NA	False	NA	NA	NA	115151516	115123898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.13	chr10	-	3593	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-14	1023	-11	-1023	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTTGTGTTTGTAGT	NA	False	NA	NA	False	AAGAAA	-23	NA	115151510	115124011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.14	chr10	-	2047	2	NNC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	21293	-2220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGACGGTCCCTGGATTT	NA	False	NA	0	True	AGTAAA	-19	NA	115130203	115125208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115126817_115129764
ES.3758.15	chr10	-	5005	6	NIC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	7	-2221	intron_retention	FALSE	canonical	3	444	junction_3	8.86791971095814	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGGACGGTCCCTGGATT	NA	False	NA	-1	True	AGTAAA	-18	NA	115151489	115125209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115137536_115138636_115138697_115151098
ES.3758.16	chr10	-	2396	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-16	2222	-13	-2222	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGGACGGTCCCTGGAT	NA	False	NA	-2	True	AGTAAA	-17	NA	115151512	115125210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.17	chr10	-	3742	5	NNC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	14006	-2223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.673570210031	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGGACGGTCCCTGGA	NA	False	NA	-3	True	AGTAAA	-16	NA	115137490	115125211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115135561
ES.3758.18	chr10	-	2191	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-6	2417	-3	-2417	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTCCCACCTTAGTTT	NA	False	NA	NA	False	TATAAA	-23	NA	115151502	115125405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.19	chr10	-	2083	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-2	2521	1	-2521	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTTTCCTGAGTT	NA	False	NA	NA	False	AATATA	-19	NA	115151498	115125509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.2	chr10	-	4621	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-14	-5	-11	5	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGCCCTAAACTTTGTG	NA	False	NA	NA	False	AGTAAA	-21	NA	115151510	115122983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.20	chr10	-	1852	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-29	2779	-26	-2779	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGTTTTAGAATGGTT	NA	False	NA	-11	True	ATTAAA	-17	NA	115151525	115125767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.21	chr10	-	4448	6	NIC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	4	-2781	intron_retention	FALSE	canonical	3	444	junction_3	8.86791971095814	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGTTGTTTTAGAATGG	NA	False	NA	-13	True	ATTAAA	-15	NA	115151492	115125769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115137536_115138636_115138697_115151098
ES.3758.22	chr10	-	1591	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-24	3035	-21	-3035	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTAAGCTTTTGACTCT	NA	False	NA	31	True	NA	NA	NA	115151520	115126023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.23	chr10	-	4151	6	NIC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	16	-3066	intron_retention	FALSE	canonical	3	444	junction_3	8.86791971095814	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGAGGTGAATTAAC	NA	False	NA	0	True	AATATA	-18	NA	115151480	115126054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115137536_115138636_115138697_115151098
ES.3758.25	chr10	-	2709	3	ISM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	18263	3108	18263	-3108	3prime_fragment	FALSE	canonical	3	462	junction_1	3.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGCGCAAGGTGCAAAA	NA	False	NA	-9	True	ATTAAA	-16	NA	115133233	115126096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115126817_115130775_115130865_115131333
ES.3758.26	chr10	-	1321	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-2	3283	1	-3283	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCATACTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	115151498	115126271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.27	chr10	-	3377	1	FSM	ENSMUSG00000020132.11	ENSMUST00000218831.2	843	1	-22	-2512	-22	2512	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGCTTGACCTGTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	115151521	115148144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115148100_115151500
ES.3758.28	chr10	-	854	1	FSM	ENSMUSG00000020132.11	ENSMUST00000218831.2	843	1	-3	-8	-3	8	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCGTTGGAGGGTTTTTTT	NA	False	NA	0	True	AGTAAA	-18	NA	115151502	115150648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115150600_115151500
ES.3758.4	chr10	-	4413	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-29	218	-26	-218	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGATTCGGCATAATCT	NA	False	NA	NA	False	ATTAAA	-25	NA	115151525	115123206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.5	chr10	-	4091	7	NNC	ENSMUSG00000020132.11	novel	4602	7	NA	NA	217	-230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.293820035954	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCACGTACTTGGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	115151279	115123218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115126753_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.6	chr10	-	4192	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-29	439	-26	-439	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTTCCTTTTCTT	NA	False	NA	-9	True	NA	NA	NA	115151525	115123427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.3758.9	chr10	-	4018	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-5	589	-2	-589	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGTGATACTGTTTCT	NA	False	NA	NA	False	AATATA	-35	NA	115151501	115123577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ES.37580.1	chrX	+	4304	9	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_6	3.70809924354783	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111510239	111544767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111537800_111537846_111541522_111541667_111542075
ES.37580.2	chrX	+	4289	9	FSM	ENSMUSG00000025529.15	ENSMUST00000113409.8	4330	9	49	-8	49	0	multi-exon	FALSE	canonical	2	5	junction_6	4.35889894354067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111510271	111544767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_111510603_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
ES.37580.3	chrX	+	4314	10	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	142	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	4.24264068711928	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111510364	111544767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
ES.37580.4	chrX	+	4053	8	NIC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	150	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	4.0607629724434	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111510372	111544767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_111510603_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111537800_111537846_111541522_111541667_111542075
ES.37580.5	chrX	+	4168	10	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.60643369401905	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAAGTTTTATAATTT	NA	False	NA	NA	False	AATAAA	-14	NA	111510430	111544759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524661_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
ES.37580.6	chrX	+	115	2	NNC	ENSMUSG00000025529.15	novel	2519	5	NA	NA	306	-23368	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGAAATTTTGC	NA	False	NA	NA	False	AAGAAA	-18	NA	111510528	111512402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_111510603_111512361
ES.37580.7	chrX	+	3971	6	ISM	ENSMUSG00000025529.15	ENSMUST00000071814.13	3817	7	10356	10	-671	-2	3prime_fragment	FALSE	canonical	2	6	junction_3	3.8262252939418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCAAAGTTTTATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	111524326	111544757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_111525133_111533648_111533805_111534435_111534574_111537800_111537846_111541522_111541667_111542075
ES.37581.1	chrX	-	3930	17	NNC	ENSMUSG00000034607.7	novel	3886	17	NA	NA	-77	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	2.93683503111768	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTCTTTGTGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	111608425	111548123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111574020_111578730_111578833_111587067_111587149_111593090_111593166_111607866_111608205_111608321
ES.37581.2	chrX	-	3865	17	NNC	ENSMUSG00000034607.7	novel	3886	17	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	3.35177191944798	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTCTTTGTGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	111608365	111548123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111573978_111578730_111578833_111587067_111587149_111593090_111593166_111607866_111608205_111608284
ES.37581.3	chrX	-	3965	17	FSM	ENSMUSG00000034607.7	ENSMUST00000039887.4	3886	17	-77	-2	-77	2	multi-exon	FALSE	canonical	1	1	junction_16	3.09989919190931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTGTCTTTGTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	111608425	111548125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111574020_111578730_111578833_111587067_111587149_111593090_111593166_111607866_111608205_111608284
ES.37581.4	chrX	-	3800	16	NNC	ENSMUSG00000034607.7	novel	3886	17	NA	NA	-30	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3.15101394615906	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATTGTCTTTGTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	111608378	111548125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111574020_111578730_111578833_111593090_111593166_111607866_111608205_111608321
ES.37582.1	chrX	-	173	1	Intergenic	novelGene_30781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGAGGGCATTTTC	NA	False	NA	NA	False	NA	NA	NA	111779588	111779415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_111779400_111779600
ES.37583.1	chrX	+	2002	2	Antisense	novelGene_ENSMUSG00000025531.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	111964034	111966490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_111964668_111965121
ES.37584.1	chrX	+	2700	1	Intergenic	novelGene_30782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACATTTATTGTCACA	NA	False	NA	NA	False	NA	NA	NA	112065680	112068380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112065700_112068400
ES.37585.1	chrX	+	1548	1	Antisense	novelGene_ENSMUSG00000025531.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTTAACTTCCTTATG	NA	False	NA	NA	False	NA	NA	NA	112068741	112070289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_112068700_112070300
ES.37586.1	chrX	+	155	1	Intergenic	novelGene_30783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAATAAATTTTAAC	NA	False	NA	NA	False	NA	NA	NA	112082307	112082462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112082300_112082500
ES.37587.1	chrX	+	166	1	Intergenic	novelGene_30784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACTTATAAACT	NA	False	NA	NA	False	NA	NA	NA	112084485	112084651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112084500_112084700
ES.37588.1	chrX	+	4242	1	Intergenic	novelGene_30785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAATCCATTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	112089648	112093890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112089600_112093900
ES.37588.2	chrX	+	123	1	Intergenic	novelGene_30786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATACTACTTT	NA	False	NA	NA	False	NA	NA	NA	112090821	112090944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112090800_112090900
ES.37589.1	chrX	-	5746	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	23	-901	15	901	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTTAAACAAGTAGC	NA	False	NA	NA	False	AATAAA	-27	NA	112095191	111949388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.10	chrX	-	3375	4	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	81.2827711688577	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095209	111950289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_112095137
ES.37589.12	chrX	-	4597	12	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	53.755030516084	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095208	111950289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112095137
ES.37589.14	chrX	-	4873	15	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	48.2269295590532	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCACTGTAATGGCTTAT	NA	False	NA	-10	True	AATAAA	-15	NA	112095214	111950290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095131
ES.37589.15	chrX	-	3282	5	NNC	ENSMUSG00000025531.15	novel	4749	14	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.0745462856753	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCACTGTAATGGCTTAT	NA	False	NA	-10	True	AATAAA	-15	NA	112095210	111950290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953315_112049112_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.16	chrX	-	3787	5	NIC	ENSMUSG00000025531.15	novel	4749	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	86.1423240921674	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCACTGTAATGGCTTA	NA	False	NA	-11	True	AATAAA	-14	NA	112095208	111950291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_112025712_112026128_112095137
ES.37589.17	chrX	-	5017	16	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.6592788367385	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCACTGTAATGGCTTA	NA	False	NA	-11	True	AATAAA	-14	NA	112095227	111950291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953333_111957032_111957194_111962758_111962858_111973918_111974057_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.18	chrX	-	4959	16	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1909604006527	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCACTGTAATGGCTTA	NA	False	NA	-11	True	AATAAA	-14	NA	112095210	111950291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112082613_112082711_112095137
ES.37589.19	chrX	-	4773	16	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6744755371356	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCACTGTAATGGCTTA	NA	False	NA	-11	True	AATAAA	-14	NA	112095209	111950291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111950422_111950509_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.2	chrX	-	4893	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	-13	-12	-13	12	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTATTTTTTTATATTTG	NA	False	NA	3	True	AATAAA	-28	NA	112095227	111950277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.20	chrX	-	4710	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	6	152	-2	-150	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTTGCAAATACTTA	NA	False	NA	NA	False	TTTAAA	-15	NA	112095208	111950441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.21	chrX	-	4297	12	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	0	-296	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	53.755030516084	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGGACATTTCTAACAT	NA	False	NA	NA	False	AATAAA	-23	NA	112095206	111950587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112095137
ES.37589.22	chrX	-	4562	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	4	302	-4	-300	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTAGTGGACATTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	112095210	111950591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.23	chrX	-	4021	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	11	836	3	-834	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTCCAGGTCATTTAC	NA	False	NA	NA	False	NA	NA	NA	112095203	111951125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.25	chrX	-	2535	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	0	2333	0	248	multi-exon	FALSE	canonical	3	145	junction_7	16.3001189428489	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGGAGTAAAAGTTGG	NA	False	NA	NA	False	AATAAA	-31	NA	112095214	111952622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.26	chrX	-	4882	13	FSM	ENSMUSG00000025531.15	ENSMUST00000135821.8	3386	13	-3	-1493	-3	1493	multi-exon	FALSE	canonical	1	2	junction_1	51.3946468245694	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTTCTGCCTCATT	NA	False	NA	NA	False	AATATA	-24	NA	112095209	111970734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111974057_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.27	chrX	-	3055	13	FSM	ENSMUSG00000025531.15	ENSMUST00000135821.8	3386	13	0	331	0	-331	multi-exon	FALSE	canonical	1	2	junction_1	51.3946468245694	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTTGTATCATGATTG	NA	False	NA	NA	False	AATAAA	-23	NA	112095206	111972558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111974057_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.28	chrX	-	2207	8	ISM	ENSMUSG00000025531.15	ENSMUST00000135821.8	3386	13	14	46637	14	7121	5prime_fragment	FALSE	canonical	3	154	junction_7	13.3186994523505	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCCATGAATTTGAAG	NA	False	NA	NA	False	NA	NA	NA	112095192	112018864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.3	chrX	-	4745	14	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-2	8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	48.7938544971228	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTTATTTTTTTATA	NA	False	NA	-1	True	AATAAA	-24	NA	112095208	111950281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112050410_112050484_112069200_112069268_112095137
ES.37589.4	chrX	-	6588	3	ISM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	129075	-3	-8863	3	3prime_fragment	FALSE	canonical	3	165	junction_2	7	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTAATGGCTTATTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	111966139	111950286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_111953333_111957032_111957194_111962758
ES.37589.5	chrX	-	9473	2	FSM	ENSMUSG00000025531.15	ENSMUST00000153417.2	706	2	-6184	-2583	-6184	2	multi-exon	FALSE	canonical	3	179	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTAATGGCTTATTTT	NA	False	NA	-7	True	AATAAA	-18	NA	111963460	111950287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032
ES.37589.6	chrX	-	4939	16	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.1909604006527	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTAATGGCTTATTT	NA	False	NA	-8	True	AATAAA	-17	NA	112095210	111950288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112069663_112069738_112095137
ES.37589.7	chrX	-	4746	14	FSM	ENSMUSG00000025531.15	ENSMUST00000113388.3	4749	14	6	-3	-2	1	multi-exon	FALSE	canonical	1	1	junction_9	49.178096822677	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTAATGGCTTATTT	NA	False	NA	-8	True	AATAAA	-17	NA	112095208	111950288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ES.37589.8	chrX	-	4674	13	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	50.7304286290673	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGTAATGGCTTATTT	NA	False	NA	-8	True	AATAAA	-17	NA	112095217	111950288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112069200_112069268_112095137
ES.37589.9	chrX	-	4847	15	NNC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	47.8309629885095	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095208	111950289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049164_112050431_112050484_112069200_112069268_112095137
ES.3759.1	chr10	-	2862	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	79.1568414955748	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	-1	True	TATAAA	-22	NA	115198131	115176643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115197956
ES.3759.10	chr10	-	2829	7	ISM	ENSMUSG00000069520.7	ENSMUST00000218731.2	1346	8	36	1068	2	0	5prime_fragment	FALSE	canonical	3	28	junction_6	86.2470611415575	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198100	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197969
ES.3759.11	chr10	-	2819	7	NIC	ENSMUSG00000069520.7	novel	2799	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	87.6749045559155	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198412	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115198291
ES.3759.12	chr10	-	2969	7	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.3497739666294	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198137	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115178575_115179602_115179813_115182936_115183184_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.13	chr10	-	2923	7	NIC	ENSMUSG00000069520.7	novel	2799	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	71.1213751273132	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198418	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
ES.3759.17	chr10	-	2820	7	NIC	ENSMUSG00000069520.7	novel	2949	7	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	79.1568414955748	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGACTTGTTTTGTTTTT	NA	False	NA	-5	True	TATAAA	-18	NA	115198106	115176647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115197969
ES.3759.18	chr10	-	2732	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	66	214	-4	-214	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGTACTGTAATGAT	NA	False	NA	NA	False	NA	NA	NA	115198106	115176860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.19	chr10	-	1714	6	NIC	ENSMUSG00000069520.7	novel	1346	8	NA	NA	-4	-1007	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	100.412349838055	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTACTGCCGTGTGGA	NA	False	NA	NA	False	AATACA	-21	NA	115198106	115177653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115197811_115197865_115197969
ES.3759.2	chr10	-	2976	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	6	3	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	-1	True	TATAAA	-22	NA	115198146	115176643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
ES.3759.21	chr10	-	1992	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	10	1010	0	-1010	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTCCTTACTGCCGTGT	NA	False	NA	NA	False	AATACA	-18	NA	115198162	115177656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.22	chr10	-	1308	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-3	1343	combination_of_known_junctions	FALSE	canonical	3	28	junction_6	68.9365650435239	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTCCCGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-22	NA	115198139	115178304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197969
ES.3759.23	chr10	-	3496	5	ISM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	-13	1662	-13	1339	intron_retention	FALSE	canonical	3	189	junction_4	18.07449860992	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGCTCCTCCCGTGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115198185	115178308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558
ES.3759.24	chr10	-	1329	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	19	1664	-1	1337	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCAGCTCCTCCCGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	115198153	115178310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.27	chr10	-	1230	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	9	1337	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	71.1213751273132	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCAGCTCCTCCCGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	115198389	115178310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115198291
ES.3759.28	chr10	-	1290	7	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	2	1337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.2727079959885	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCAGCTCCTCCCGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	115198127	115178310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115178575_115179602_115179813_115182936_115183189_115183550_115183689_115195558_115195673_115197713_115197855_115197956
ES.3759.29	chr10	-	1183	7	NIC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-4	1336	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	66.9842435867487	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACCAGCTCCTCCCGTG	NA	False	NA	NA	False	AATAAA	-15	NA	115198106	115178311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
ES.3759.3	chr10	-	2816	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	-14	-3	-14	3	multi-exon	FALSE	canonical	2	3	junction_6	78.0590944235342	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	-1	True	TATAAA	-22	NA	115198420	115176643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
ES.3759.4	chr10	-	2997	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	87.2364836615544	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	False	NA	-1	True	TATAAA	-22	NA	115198412	115176643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956_115198132_115198291
ES.3759.6	chr10	-	2991	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	21	0	1	0	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198151	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.7	chr10	-	1857	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	63.4967458590901	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198151	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ES.3759.8	chr10	-	1711	8	NNC	ENSMUSG00000069520.7	novel	3012	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	80.4236232936161	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198103	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115177245_115178378_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197811_115197865_115197956
ES.3759.9	chr10	-	5078	5	ISM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	24	0	-3	0	intron_retention	FALSE	canonical	3	189	junction_4	18.07449860992	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198105	115176646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558
ES.37590.1	chrX	+	392	1	Intergenic	novelGene_30787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	1842	False	NA	NA	False	NA	NA	NA	112095297	112095689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112095300_112095700
ES.37591.1	chrX	+	2263	15	NIC	ENSMUSG00000025592.18	novel	2894	16	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.64005494464026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATTTCTCTGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	112207230	112745588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_112207415_112207624_112207775_112362154_112362194_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112662516_112662601_112675482_112675573_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ES.37591.2	chrX	+	4828	12	FSM	ENSMUSG00000025592.18	ENSMUST00000113382.8	5155	12	-48	375	-43	-375	multi-exon	FALSE	canonical	0	0	junction_1	3.34268660197277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCCAAAAGACAGTGAT	NA	False	NA	NA	False	AATAAA	-30	NA	112207905	112743578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_112208633_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112662516_112662601_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784
ES.37591.3	chrX	+	2359	2	NNC	ENSMUSG00000025592.18	novel	475	4	NA	NA	-30	-216116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACAGTAGCAAACTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	112207918	112249880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_112208633_112248235
ES.37591.4	chrX	+	2645	14	NIC	ENSMUSG00000025592.18	novel	2520	13	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.77472127581086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTCTCTGAGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	112207918	112745590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112662516_112662601_112675482_112675573_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ES.37592.1	chrX	-	3838	1	Intergenic	novelGene_30788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	1714	False	NA	NA	False	NA	NA	NA	112382825	112378987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_112379000_112382800
ES.37593.1	chrX	+	302	1	Intergenic	novelGene_30789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAACGGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	112914476	112914778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_112914500_112914800
ES.37594.1	chrX	-	4416	1	Intergenic	novelGene_30790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTTGTTATAAAATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	113411207	113406791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_113406800_113411200
ES.37595.1	chrX	-	253	1	Intergenic	novelGene_30791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGGTAAAATT	NA	False	NA	NA	False	AATACA	-17	NA	113501081	113500828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_113500800_113501100
ES.37596.1	chrX	+	824	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-79	-2	-79	2	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCATTTTTTTTTTCT	NA	False	NA	3	True	AATAAA	-18	NA	113814629	113815640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_113814900_113815086
ES.37596.2	chrX	+	3323	2	FSM	ENSMUSG00000047079.2_ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	-10	-2570	-10	1	multi-exon	FALSE	canonical	3	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCATTTTCTTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	113814698	113818208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_113814900_113815086
ES.37597.1	chrX	-	204	1	Intergenic	novelGene_30792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAAAATCTTAAATCC	NA	False	NA	NA	False	NA	NA	NA	113886784	113886580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_113886600_113886800
ES.37598.1	chrX	+	3348	1	Intergenic	novelGene_30793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGGTTTCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	113904110	113907458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_113904100_113907500
ES.37599.1	chrX	-	132	1	Intergenic	novelGene_30794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113953774	113953642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_113953600_113953800
ES.376.1	chr1	+	3512	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	0	-54	0	54	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGTGACTGAAGAAACT	NA	False	NA	NA	False	AATAAA	-21	NA	43137869	43155161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ES.376.2	chr1	+	5239	3	ISM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	20	11	20	-11	intron_retention	FALSE	canonical	3	186	junction_2	12.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTATCTTGAGCAG	NA	False	NA	NA	False	AATAAA	-4	NA	43137889	43155096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43138023_43139874_43140042_43150157
ES.376.3	chr1	+	2709	3	NNC	ENSMUSG00000010290.8	novel	3458	4	NA	NA	36	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	105.5	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTATCTTGAGCAG	NA	False	NA	NA	False	AATAAA	-4	NA	43137905	43155096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43138023_43139874_43139977_43152606
ES.376.5	chr1	+	4034	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	42	-618	42	618	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGGTTATGTTTTTAGG	NA	False	NA	NA	False	AATAAA	-29	NA	43137911	43155725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ES.376.6	chr1	+	3396	4	NNC	ENSMUSG00000010290.8	novel	3458	4	NA	NA	45	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.7706157589448	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTATCTTGAGCAG	NA	False	NA	NA	False	AATAAA	-4	NA	43137914	43155096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43138023_43139874_43140042_43150163_43150534_43152345
ES.376.7	chr1	+	3034	3	NIC	ENSMUSG00000010290.8	novel	3458	4	NA	NA	45	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	104	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGCAGGCCTGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	43137914	43155104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43138023_43139874_43140042_43152345
ES.3760.1	chr10	+	130	1	Intergenic	novelGene_2857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAAAACC	NA	False	NA	NA	False	NA	NA	NA	115216047	115216177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115216000_115216200
ES.37600.1	chrX	-	172	1	Intergenic	novelGene_30795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTTATCTTTATGAT	NA	False	NA	NA	False	NA	NA	NA	115025061	115024889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_115024900_115025100
ES.37601.1	chrX	-	2957	2	Antisense	novelGene_ENSMUSG00000064551.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATAAAATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	115318164	115211483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_115212604_115316327
ES.37602.1	chrX	-	131	1	Intergenic	novelGene_30796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	115646135	115646004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_115646000_115646100
ES.37603.1	chrX	-	6213	1	Intergenic	novelGene_30797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2820	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGTGCTTTGTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	116231288	116225075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116225100_116231300
ES.37603.10	chrX	-	5096	2	Intergenic	novelGene_30803	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231722	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227237_116227316
ES.37603.11	chrX	-	4906	2	Intergenic	novelGene_30805	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116228646_116228917
ES.37603.12	chrX	-	3836	2	Intergenic	novelGene_30806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227704_116229045
ES.37603.13	chrX	-	4274	2	Intergenic	novelGene_30807	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116228750_116229653
ES.37603.15	chrX	-	4327	2	Intergenic	novelGene_30808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227411_116228261
ES.37603.16	chrX	-	4751	2	Intergenic	novelGene_30809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116226752_116227178
ES.37603.17	chrX	-	4906	2	Intergenic	novelGene_30810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116230933_116231204
ES.37603.18	chrX	-	5104	2	Intergenic	novelGene_30811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231725	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116229525_116229599
ES.37603.19	chrX	-	3281	2	Intergenic	novelGene_30802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231620	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116229708_116231500
ES.37603.2	chrX	-	5186	1	Intergenic	novelGene_30798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2820	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCTTCATGGCCTAA	NA	False	NA	NA	False	AAAAAG	-4	NA	116231728	116226542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116226500_116231700
ES.37603.20	chrX	-	3180	2	Intergenic	novelGene_30815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGATGGAA	NA	False	NA	NA	False	NA	NA	NA	116231724	116226557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227411_116229397
ES.37603.21	chrX	-	5111	2	Intergenic	novelGene_30817	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116228094_116228147
ES.37603.22	chrX	-	4846	2	Intergenic	novelGene_30818	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227411_116227729
ES.37603.23	chrX	-	3810	2	Intergenic	novelGene_30816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231722	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227704_116229056
ES.37603.24	chrX	-	5002	3	Intergenic	novelGene_30823	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231726	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116230520_116230615_116231264_116231332
ES.37603.25	chrX	-	3163	2	Intergenic	novelGene_30819	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227473_116229474
ES.37603.26	chrX	-	3858	2	Intergenic	novelGene_30820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227723_116229029
ES.37603.27	chrX	-	4152	2	Intergenic	novelGene_30821	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231724	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116230403_116231415
ES.37603.28	chrX	-	4612	2	Intergenic	novelGene_30822	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116231725	116226559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116226709_116227262
ES.37603.29	chrX	-	4582	1	Intergenic	novelGene_30824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2819	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGCTTTTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	116231724	116227142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227100_116231700
ES.37603.3	chrX	-	5125	2	Intergenic	novelGene_30799	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAAGCTTCATGGCCT	NA	False	NA	NA	False	AAAAAG	-2	NA	116231724	116226544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227704_116227758
ES.37603.4	chrX	-	4732	2	Intergenic	novelGene_30800	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAAGCTTCATGGCCT	NA	False	NA	NA	False	AAAAAG	-2	NA	116231724	116226544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116230166_116230613
ES.37603.5	chrX	-	4388	2	Intergenic	novelGene_30801	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231007	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116228279_116228351
ES.37603.6	chrX	-	4934	3	Intergenic	novelGene_30812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231725	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227312_116227440_116230526_116230641
ES.37603.7	chrX	-	3115	2	Intergenic	novelGene_30813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231725	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116227411_116229474
ES.37603.8	chrX	-	5106	2	Intergenic	novelGene_30814	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231727	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116229122_116229196
ES.37603.9	chrX	-	2561	2	Intergenic	novelGene_30804	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231722	116226546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_116226993_116229607
ES.37604.1	chrX	-	179	1	Intergenic	novelGene_30825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGATAA	NA	False	NA	NA	False	NA	NA	NA	117353983	117353804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_117353800_117354000
ES.37605.1	chrX	+	182	1	Intergenic	novelGene_30826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTACAGGA	NA	False	NA	NA	False	NA	NA	NA	117370131	117370313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_117370100_117370300
ES.37606.1	chrX	-	3464	1	Intergenic	novelGene_30827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAACTACCATGATCAT	NA	False	NA	NA	False	NA	NA	NA	118424119	118420655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_118420700_118424100
ES.37607.1	chrX	+	1692	2	FSM	ENSMUSG00000034732.5	ENSMUST00000040961.3	2434	2	-10	752	-10	-596	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGAATGAGGAAAATGA	NA	False	NA	NA	False	AATAAA	-27	NA	118836882	118839110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_118836998_118837533
ES.37608.1	chrX	-	177	1	Intergenic	novelGene_30828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	119176556	119176379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_119176400_119176600
ES.37609.1	chrX	+	2162	1	FSM	ENSMUSG00000034755.19	ENSMUST00000192977.2	2145	1	0	-17	0	17	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	119200023	119202185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_119200000_119202200
ES.3761.1	chr10	+	7003	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	-41	-5	-41	5	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGACTGTTTTGTGTT	NA	False	NA	14	True	AATAAA	-26	NA	115220822	115268682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.11	chr10	+	6657	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	2	298	2	-297	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTCCTCTAAGTCTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	115220865	115268379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.13	chr10	+	7733	33	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	5	3	intron_retention	FALSE	canonical	3	77	junction_22	26.2896835457846	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGACTGTTTTGTG	NA	False	NA	12	True	AATAAA	-24	NA	115220868	115268680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607
ES.3761.14	chr10	+	7666	33	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	9	-2	intron_retention	FALSE	canonical	3	77	junction_22	26.9021483517116	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATAGTGGGACTGT	NA	False	NA	6	True	AATAAA	-18	NA	115220872	115268674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607_115267671_115267800
ES.3761.15	chr10	+	1825	1	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	10	-44081	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCTGACACTTGATTGG	NA	False	NA	NA	False	TATAAA	-4	NA	115220873	115222698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115220900_115222700
ES.3761.18	chr10	+	6775	34	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	41.6757786179932	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220875	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.19	chr10	+	6649	35	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	14	-297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.3085703896067	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTCCTCTAAGTCTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	115220877	115268379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226980_115233915_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256544_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.2	chr10	+	6798	34	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-38	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	32.9374842634519	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220825	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.20	chr10	+	6798	36	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.6981744481997	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220878	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221169_115221304_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.21	chr10	+	7071	36	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	17	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.7921922613437	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGTTTAAAGAACAGTTA	NA	False	NA	-7	True	AATAAA	-5	NA	115220880	115268661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115248718_115248866_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.22	chr10	+	8413	37	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46.6666666666667	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220880	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115222902_115225077_115225158_115226142_115226342_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.25	chr10	+	7716	33	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	35	3	intron_retention	FALSE	canonical	2	5	junction_15	37.0658198344513	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGACTGTTTTGTG	NA	False	NA	12	True	AATAAA	-24	NA	115220898	115268680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607
ES.3761.26	chr10	+	7561	34	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	42	-1	intron_retention	FALSE	canonical	3	77	junction_22	26.5397807690466	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAATAGTGGGACTGTT	NA	False	NA	7	True	AATAAA	-19	NA	115220905	115268675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607_115267671_115267800
ES.3761.27	chr10	+	6992	34	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	43	-7	intron_retention	FALSE	canonical	2	5	junction_15	37.184250741597	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220906	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.28	chr10	+	7334	34	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	284	-2	intron_retention	FALSE	canonical	2	5	junction_15	41.0755535803034	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATAGTGGGACTGT	NA	False	NA	6	True	AATAAA	-18	NA	115221147	115268674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240101_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607_115267671_115267800
ES.3761.3	chr10	+	6800	34	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	33.1580515410939	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATAGTGGGACTGTTT	NA	False	NA	8	True	AATAAA	-20	NA	115220844	115268676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.30	chr10	+	6835	37	NNC	ENSMUSG00000034163.11	novel	1546	7	NA	NA	1497	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.8949553923612	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115222360	115268677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115222902_115225077_115225172_115226139_115226232_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.31	chr10	+	9195	33	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	3253	-1	intron_retention	FALSE	canonical	3	11	junction_5	32.8535903431802	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAATAGTGGGACTGTT	NA	False	NA	7	True	AATAAA	-19	NA	115224116	115268675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240101_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607_115267671_115267800
ES.3761.32	chr10	+	6276	34	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	5523	0	5523	0	3prime_fragment	FALSE	canonical	3	77	junction_21	26.882186932769	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115226386	115268677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.33	chr10	+	6385	31	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	6059	0	intron_retention	FALSE	canonical	0	0	junction_12	34.34829770972	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATAGTGGGACTGTTT	NA	False	NA	8	True	AATAAA	-20	NA	115226922	115268676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607
ES.3761.34	chr10	+	5634	32	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	15752	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	31.6973526404347	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115236615	115268677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251250_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.35	chr10	+	7018	27	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	16733	-7	intron_retention	FALSE	canonical	0	0	junction_17	45.6921296292827	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115237596	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115255549_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607
ES.3761.36	chr10	+	4478	25	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	23910	-5	-18436	5	3prime_fragment	FALSE	canonical	3	77	junction_12	18.2490011142163	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGACTGTTTTGTGTT	NA	False	NA	14	True	AATAAA	-26	NA	115244773	115268682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.38	chr10	+	5663	20	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-16028	0	intron_retention	FALSE	canonical	3	77	junction_9	18.2418349662606	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATAGTGGGACTGTTT	NA	False	NA	8	True	AATAAA	-20	NA	115247181	115268676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115264867_115266557_115267348_115267607_115267671_115267800
ES.3761.39	chr10	+	4016	17	NIC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-13345	-2	intron_retention	FALSE	canonical	3	77	junction_6	18.6370556620406	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATAGTGGGACTGT	NA	False	NA	6	True	AATAAA	-18	NA	115249864	115268674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115267348_115267607
ES.3761.40	chr10	+	2572	14	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	33682	8	-8664	-7	3prime_fragment	FALSE	canonical	3	77	junction_1	19.7989898732233	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	2891	False	NA	1	True	AATAAA	-13	NA	115254545	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.41	chr10	+	5206	11	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-8083	2	intron_retention	FALSE	non_canonical	0	0	junction_9	39.1744814898679	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGGGACTGTTTTGT	3472	False	NA	11	True	AATAAA	-23	NA	115255126	115268679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115265177_115265383_115267348_115267607
ES.3761.42	chr10	+	7293	3	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	-4418	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	58.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATAGTGGGACTGT	7137	False	NA	6	True	AATAAA	-18	NA	115258791	115268674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115260558_115262940_115265177_115265383
ES.3761.6	chr10	+	7088	34	ISM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	0	-1	0	1	intron_retention	FALSE	canonical	3	77	junction_22	26.2106322926225	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGGGACTGTTTTG	NA	False	NA	10	True	AATAAA	-22	NA	115220863	115268678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607
ES.3761.7	chr10	+	6966	35	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	36.7277461279635	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTAATAGTGGGACTGT	NA	False	NA	6	True	AATAAA	-18	NA	115220864	115268674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248371_115248495_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.8	chr10	+	6951	35	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.9152345956457	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGGGACTGTTTTG	NA	False	NA	10	True	AATAAA	-22	NA	115220864	115268678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233915_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.3761.9	chr10	+	6987	35	NNC	ENSMUSG00000034163.11	novel	6957	35	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	33.1755319016141	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTTAATAGTGGG	NA	False	NA	1	True	AATAAA	-13	NA	115220865	115268669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259069_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ES.37610.1	chrX	-	2342	1	Intergenic	novelGene_30829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119827884	119825542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_119825500_119827900
ES.37611.1	chrX	-	803	2	Intergenic	novelGene_30830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCCTTGTTTGACTCCC	NA	False	NA	NA	False	ATTAAA	-22	NA	119836429	119835461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_119836188_119836352
ES.37612.1	chrX	-	868	1	Intergenic	novelGene_30831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120244531	120243663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_120243700_120244500
ES.37613.1	chrX	-	1318	1	Intergenic	novelGene_30832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATGAAAACAATAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	121295800	121294482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_121294500_121295800
ES.37614.1	chrX	-	2974	1	FSM	ENSMUSG00000055733.7	ENSMUST00000079490.6	2837	1	-64	-73	-64	73	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCAATAAGAATAACTATT	NA	False	NA	NA	False	AATAAA	-21	NA	121307162	121304188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_121304200_121307200
ES.37615.1	chrX	-	176	1	Intergenic	novelGene_30833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	121944371	121944195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_121944200_121944400
ES.37616.1	chrX	+	6817	1	Intergenic	novelGene_30834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	122307085	122313902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_122307100_122313900
ES.37616.2	chrX	+	5231	3	Intergenic	novelGene_30835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	122307163	122313900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_122307593_122307661_122310663_122312099
ES.37616.3	chrX	+	5270	2	Intergenic	novelGene_30836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	122307194	122313901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_122310663_122312099
ES.37617.1	chrX	-	7674	3	Antisense	novelGene_ENSMUSG00000093796.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGTTTGCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	122728594	122470780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_122474125_122476496_122477797_122725564
ES.37618.1	chrX	-	1445	2	Intergenic	novelGene_30837	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	125444542	125443054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_125443159_125443201
ES.37618.2	chrX	-	1623	1	Intergenic	novelGene_30838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	125444677	125443054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_125443100_125444700
ES.37619.1	chrX	-	251	1	Intergenic	novelGene_30839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAAGGATAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	125466877	125466626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_125466600_125466900
ES.3762.1	chr10	-	4846	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	-93	-1072	-60	4	multi-exon	FALSE	canonical	1	1	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTCATCCCTGTTA	2300	False	NA	NA	False	ATTAAA	-17	NA	115220408	115204304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115220109
ES.3762.2	chr10	-	5323	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-349	-4	-341	4	multi-exon	FALSE	canonical	3	8	junction_1	6.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTCATCCCTGTTA	2019	False	NA	NA	False	ATTAAA	-17	NA	115220689	115204304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115212256_115212453_115220109
ES.3762.3	chr10	-	3397	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	19	1554	-6	-486	multi-exon	FALSE	canonical	3	8	junction_1	6.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGCCTGTTTTCTTC	2387	False	NA	NA	False	AATAAA	-21	NA	115220321	115205862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115212256_115212453_115220109
ES.3762.4	chr10	-	3739	4	NNC	ENSMUSG00000020137.6	novel	4970	3	NA	NA	-110	-487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.89949493661167	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTCTGCCTGTTTTCTT	2250	False	NA	NA	False	AATAAA	-20	NA	115220458	115205863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_115208872_115209040_115209227_115212256_115212453_115220109
ES.3762.5	chr10	-	3277	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	-92	496	-59	-496	multi-exon	FALSE	canonical	1	1	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATGTAATTCTCTGCC	2301	False	NA	NA	False	AATAAA	-11	NA	115220407	115205872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115220109
ES.3762.6	chr10	-	2785	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-350	2535	-342	-1467	multi-exon	FALSE	canonical	3	8	junction_1	6.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATGTGTGTCTCTGT	2018	False	NA	NA	False	AATAAA	-13	NA	115220690	115206843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115212256_115212453_115220109
ES.3762.7	chr10	-	1097	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	-111	2695	-78	-2695	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTAATGTATTTTG	2282	False	NA	NA	False	ATTAAA	-10	NA	115220426	115208071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115208852_115220109
ES.3762.8	chr10	-	1527	1	FSM	ENSMUSG00000020137.6	ENSMUST00000218989.2	527	1	-1085	85	-1085	-85	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	1275	False	NA	NA	False	NA	NA	NA	115221433	115219906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115219900_115221400
ES.37620.1	chrX	+	4404	2	Intergenic	novelGene_30840	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATTCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	125909125	125916066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_125909239_125911775
ES.37621.1	chrX	+	1553	1	Intergenic	novelGene_30841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	126078144	126079697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_126078100_126079700
ES.37622.1	chrX	+	179	1	Intergenic	novelGene_30844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAGAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	126443937	126444116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_126443900_126444100
ES.37623.1	chrX	-	1979	1	Intergenic	novelGene_30842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	False	NA	NA	False	NA	NA	NA	126435387	126433408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126433400_126435400
ES.37623.2	chrX	-	6730	2	Intergenic	novelGene_30843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGTTCAATCAGACTG	NA	False	NA	NA	False	NA	NA	NA	126444222	126435384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126441616_126443723
ES.37624.1	chrX	-	5621	2	Intergenic	novelGene_30845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTCAAAATTCTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	126455904	126446808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126452025_126455499
ES.37624.2	chrX	-	4223	2	Intergenic	novelGene_30846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGTGTTGTGTATGAAT	NA	False	NA	NA	False	NA	NA	NA	126455837	126448139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126452025_126455499
ES.37624.3	chrX	-	2967	2	Intergenic	novelGene_30847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATACCCTCGGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	126455713	126449271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126452025_126455499
ES.37624.4	chrX	-	2125	2	Intergenic	novelGene_30848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	126455774	126450174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_126452025_126455499
ES.37625.1	chrX	+	176	1	Intergenic	novelGene_30849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	126929458	126929634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_126929500_126929600
ES.37626.1	chrX	-	1765	1	Intergenic	novelGene_30850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTCCTGCTTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	127241197	127239432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_127239400_127241200
ES.37627.1	chrX	-	158	1	Intergenic	novelGene_30851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	128455488	128455330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128455300_128455500
ES.37628.1	chrX	-	139	1	Intergenic	novelGene_30852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	128522765	128522626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128522600_128522800
ES.37629.1	chrX	-	238	1	Intergenic	novelGene_30853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTAGCCTGGCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	128613659	128613421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128613400_128613700
ES.3763.10	chr10	-	2006	1	Antisense	novelGene_ENSMUSG00000034163.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6145	False	NA	NA	False	NA	NA	NA	115245290	115243284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115243300_115245300
ES.3763.2	chr10	-	2441	6	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCCGCCTCTACAGC	NA	False	NA	NA	False	NA	NA	NA	115239225	115224815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115226232_115226554_115226969_115233906_115233975_115236620_115236817_115237511_115237738_115239104
ES.3763.3	chr10	-	6736	30	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115264850	115224835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115226969_115233906_115233971_115236615_115236817_115237511_115237738_115239104_115239224_115240099_115240203_115242257_115242466_115242636_115242803_115243778_115243916_115244773_115244898_115244997_115245148_115246433_115246609_115247103_115247235_115247622_115248164_115248257_115248370_115249864_115249998_115250099_115250220_115251140_115251250_115251524_115251644_115252642_115252826_115254544_115254734_115255676_115255864_115256544_115256783_115259107_115259214_115259286_115259486_115260460_115260557_115262939_115263049_115263299_115263408_115263529_115263694_115264764
ES.3763.4	chr10	-	6292	3	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCCTGCTCCACGTCAC	NA	False	NA	NA	False	NA	NA	NA	115240110	115230478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115233971_115236615_115236817_115237511
ES.3763.5	chr10	-	5588	3	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115240110	115230510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115233971_115236615_115237738_115239104
ES.3763.6	chr10	-	6653	3	Antisense	novelGene_ENSMUSG00000112822.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115239225	115230510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115236817_115237511_115237738_115239104
ES.3763.7	chr10	-	2914	2	Antisense	novelGene_ENSMUSG00000034163.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACAAAAACTTATTTC	NA	False	NA	NA	False	AATAAA	-24	NA	115240110	115236501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115236817_115237511
ES.3763.8	chr10	-	4694	27	Antisense	novelGene_ENSMUSG00000034163.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAACTTTTCATACGT	NA	False	NA	NA	False	NA	NA	NA	115264850	115237149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115237738_115239104_115239223_115240101_115240203_115242257_115242466_115242636_115242803_115243778_115243916_115244773_115244898_115244997_115245148_115246433_115246609_115247103_115247235_115247622_115248164_115248257_115248370_115249864_115249998_115250099_115250220_115251140_115251246_115251524_115251644_115252642_115252826_115254544_115254734_115255676_115255864_115256544_115256783_115259107_115259214_115259286_115259486_115260460_115260557_115262939_115263049_115263299_115263408_115263529_115263695_115264764
ES.3763.9	chr10	-	2922	1	Antisense	novelGene_ENSMUSG00000034163.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAAAACGTTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	115240110	115237188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115237200_115240100
ES.37630.1	chrX	+	721	5	Intergenic	novelGene_30854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAAAAAACCCTT	NA	False	NA	NA	False	NA	NA	NA	128632312	128641454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_128632403_128632741_128632895_128634904_128635045_128640933_128641012_128641194
ES.37631.1	chrX	+	9020	28	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-388	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.4291698764583	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650102	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_128995547_128995722_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.10	chrX	+	3064	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	14	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.7861777650414	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATACTCATTCATTTTCT	NA	False	NA	NA	False	NA	NA	NA	128650504	128943171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37631.11	chrX	+	4205	27	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	16	400	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7133145770314	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCACTAGATTTCACT	NA	False	NA	NA	False	AATAAA	-13	NA	128650506	129362346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.12	chrX	+	4798	23	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	20	310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.3117749360495	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTATTGTACAAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128650510	129081530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
ES.37631.13	chrX	+	3613	25	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	23	5800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	36.2137750034431	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATCAAGATTCAG	NA	False	NA	NA	False	NA	NA	NA	128650513	129087020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129080070_129081299_129081551_129086992
ES.37631.14	chrX	+	3850	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	25	-41575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.0520127612655	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTACCTCTTATTTTAG	NA	False	NA	NA	False	AATAAA	-16	NA	128650515	128901704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
ES.37631.15	chrX	+	9502	24	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	25	45685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	28.6135188216563	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGGGTTTTGTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	128650515	129126905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129120459
ES.37631.16	chrX	+	3038	16	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	25	-70062	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	29.2977056363729	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATCAGTGTTATTTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	128650515	128873217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027
ES.37631.17	chrX	+	3377	24	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	-27	5321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.7343653361655	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTTGTTCTTCAATG	NA	False	NA	NA	False	NA	NA	NA	128650517	129086541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129086234
ES.37631.18	chrX	+	8378	26	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-23	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_22	32.5960488403119	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650521	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.2	chrX	+	988	2	NNC	ENSMUSG00000034480.19	novel	994	3	NA	NA	-159	-291122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTTTGACTTGTCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	128650331	128652157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128651703
ES.37631.20	chrX	+	4115	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-21	-41302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.0520127612655	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTTATCGTCTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	128650523	128901977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
ES.37631.21	chrX	+	3764	18	NNC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	-18	-41622	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.7730057435671	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGATTTAAGTTAATGA	NA	False	NA	NA	False	AATAAA	-18	NA	128650526	128901657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
ES.37631.22	chrX	+	3953	17	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-18	-68235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.5240441338531	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTACCTCATCCATAAT	NA	False	NA	NA	False	AATAAA	-17	NA	128650526	128875044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243
ES.37631.23	chrX	+	7563	24	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	4625	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.7343653361655	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGTATTTGCCCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	128650527	129085845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129080070_129081602
ES.37631.24	chrX	+	4877	19	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.8497657501382	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGCACACTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	128650527	128943279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128728420_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37631.25	chrX	+	8508	22	ISM	ENSMUSG00000034480.19	ENSMUST00000037854.15	3742	27	-26	346227	-17	-65501	5prime_fragment	FALSE	canonical	3	27	junction_4	20.9411225163528	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTGCTGTCATCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	128650527	129015719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000
ES.37631.26	chrX	+	2428	17	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	-69759	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.5240441338531	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTCTTATTTGAATTT	NA	False	NA	NA	False	AATAAA	-34	NA	128650527	128873520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243
ES.37631.27	chrX	+	3799	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	-41598	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	31.1484891078592	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAATACTCAAT	NA	False	NA	NA	False	AATAAA	-42	NA	128650527	128901681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
ES.37631.28	chrX	+	8300	27	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-17	-118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7133145770314	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAATTTGTGCTGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	128650527	129366462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.29	chrX	+	4507	23	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-16	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.3117749360495	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCTTGGACTCCCTA	NA	False	NA	NA	False	AAAAAG	-32	NA	128650528	129081257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
ES.37631.3	chrX	+	8463	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	-15	-9	-15	6	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGATTCCGACTAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	128650475	129366589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.30	chrX	+	3097	24	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	-11	65146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.7343653361655	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTCTGTTTTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	128650533	129146366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129146323
ES.37631.31	chrX	+	8416	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-7	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650537	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.33	chrX	+	4453	16	NIC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	-5	-67673	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	33.1007888459206	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAAATTTTGGTGAC	NA	False	NA	NA	False	NA	NA	NA	128650539	128875606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243
ES.37631.34	chrX	+	3546	18	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-5	425	combination_of_known_junctions	FALSE	canonical	1	3	junction_17	31.9870215895918	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTCATCACTTTGTCAG	NA	False	NA	NA	False	ATTAAA	-23	NA	128650539	128943704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37631.35	chrX	+	5017	25	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-4	15218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.1053300697052	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGCTCTACTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	128650540	129096438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128699995_128700090_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129094564
ES.37631.37	chrX	+	4603	24	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	-2	-29099	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	24.6784998609624	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATCTCTCTTATAAG	NA	False	NA	NA	False	AATAAA	-12	NA	128650542	129052121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129050443
ES.37631.38	chrX	+	4353	23	ISM	ENSMUSG00000034480.19	ENSMUST00000037854.15	3742	27	-11	280813	-2	-87	5prime_fragment	FALSE	canonical	3	27	junction_4	20.8166434524901	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTGTTCTATAGAGTA	NA	False	NA	NA	False	TTTAAA	-14	NA	128650542	129081133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
ES.37631.39	chrX	+	8375	27	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-2	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	29.6483333197509	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128650542	129366580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.4	chrX	+	4864	22	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-2	68741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.6483281071862	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATAATTAGTTTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	128650488	129012020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000
ES.37631.41	chrX	+	4761	21	NNC	ENSMUSG00000034480.19	novel	4208	26	NA	NA	0	68741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.6825937958551	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATAATTAGTTTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	128650544	129012020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128704761_128704939_128721987_128722093_128803648_128803789_128839991_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000
ES.37631.42	chrX	+	3791	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	0	19	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGAAGAATCCTAAGGC	NA	False	NA	NA	False	AGTAAA	-16	NA	128650544	129361965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.43	chrX	+	7105	19	NIC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	1	46412	intron_retention	FALSE	canonical	2	6	junction_1	25.938257649205	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAACACTAAAGTCTTT	NA	False	NA	NA	False	AATAAA	-27	NA	128650545	128989691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128951211_128974570_128974673_128989275
ES.37631.44	chrX	+	8266	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	55	118	1	-118	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCAATTTGTGCTGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	128650545	129366462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.45	chrX	+	3542	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-3	416	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.7861777650414	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGAAACATCGTCATCA	NA	False	NA	NA	False	ATTAAA	-14	NA	128650550	128943695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37631.47	chrX	+	1872	6	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	8	-204093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.3827554162105	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCATGCTCATGTGTTA	NA	False	NA	NA	False	ATTAAA	-4	NA	128650561	128739186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128737954
ES.37631.48	chrX	+	4748	24	NIC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	-7	310	combination_of_known_junctions	FALSE	canonical	3	79	junction_22	13.9859502820869	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTATTGTACAAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128650565	129081530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
ES.37631.49	chrX	+	8259	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-7	-126	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAAAGCTGTCAATTTG	NA	False	NA	NA	False	AATAAA	-12	NA	128650565	129366454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.5	chrX	+	8481	27	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.3447099395378	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128650489	129366580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722108_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361593
ES.37631.50	chrX	+	10186	23	ISM	ENSMUSG00000034480.19	ENSMUST00000037854.15	3742	27	13	274956	-6	5770	5prime_fragment	FALSE	canonical	3	27	junction_4	20.8166434524901	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	128650566	129086990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
ES.37631.51	chrX	+	3634	17	NNC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	-5	-40478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	39.2681088798531	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTATATCTGCTGCATGA	NA	False	NA	NA	False	GATAAA	-17	NA	128650567	128902801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128901344
ES.37631.52	chrX	+	2535	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	4	-554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.775192725946	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTCCATTACTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	128650576	128942725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702182_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37631.53	chrX	+	3029	24	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	9	65137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	28.6135188216563	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATCATTTTTCTTCTG	NA	False	NA	NA	False	AATAAA	-9	NA	128650581	129146357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079814_129146322
ES.37631.55	chrX	+	4512	24	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	-10	35785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	31.7343653361655	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTCTTTGTATAGCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	128650714	129117005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129115366
ES.37631.56	chrX	+	2911	25	NNC	ENSMUSG00000034480.19	novel	3742	27	NA	NA	67	65146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.940580867083	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTCTGTTTTGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	128650791	129146366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722103_128728338_128728420_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974670_128989275_128989516_129010000_129010131_129079684_129079810_129146323
ES.37631.57	chrX	+	8081	26	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	51418	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	31.1290475279922	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128702142	129366580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.58	chrX	+	1983	15	NNC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	71336	5132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.562855856757	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATAATGTAAGTTATTA	NA	False	NA	NA	False	AATAAA	-22	NA	128722060	128948411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073
ES.37631.59	chrX	+	4546	10	NIC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	-16584	46403	intron_retention	FALSE	canonical	3	87	junction_4	10.4255147606577	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAAATTCAAAACACT	NA	False	NA	NA	False	AATAAA	-18	NA	128856697	128989682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128951211_128974570_128974673_128989275
ES.37631.6	chrX	+	3360	16	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	1	-69764	intron_retention	FALSE	non_canonical	0	0	junction_4	29.2977056363729	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAAAGCTCTTATTTG	NA	False	NA	NA	False	AATAAA	-29	NA	128650491	128873515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027
ES.37631.60	chrX	+	6692	13	ISM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	216782	-3	-6009	0	3prime_fragment	FALSE	non_canonical	0	0	junction_9	29.3853705098302	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128867272	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.61	chrX	+	3395	9	NNC	ENSMUSG00000034480.19	novel	4208	26	NA	NA	-1006	39175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	33.4766709814462	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATGCCTAAACTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	128872275	129120395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129117976
ES.37631.62	chrX	+	4951	1	Intergenic	novelGene_30858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTACCTACCCTTGGT	NA	False	NA	NA	False	AATATA	-36	NA	128878367	128883318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_128878400_128883300
ES.37631.63	chrX	+	2555	1	Intergenic	novelGene_30859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCATGGTGACTATATTA	NA	False	NA	NA	False	AATAAA	-9	NA	128882811	128885366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_128882800_128885400
ES.37631.64	chrX	+	7242	1	Intergenic	novelGene_30860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128956803	128964045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_128956800_128964000
ES.37631.65	chrX	+	5615	6	ISM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	359508	0	136717	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	32.0624390837628	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	129009998	129366580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.66	chrX	+	4871	1	Intergenic	novelGene_30863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTGTTGACTCAATC	NA	False	NA	NA	False	AATAAA	-14	NA	129118294	129123165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_129118300_129123200
ES.37631.67	chrX	+	5059	2	ISM	ENSMUSG00000034480.19	ENSMUST00000113320.3	8196	27	577988	3	355431	0	3prime_fragment	FALSE	canonical	3	92	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	129228712	129366580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_129228811_129361619
ES.37631.68	chrX	+	2555	1	Intergenic	novelGene_30865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTGAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-43	NA	129354175	129356730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_129354200_129356700
ES.37631.7	chrX	+	8457	27	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.7133145770314	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650491	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.8	chrX	+	8424	26	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.9372923965209	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650491	129366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ES.37631.9	chrX	+	3183	18	NNC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.7861777650414	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGCACACTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	128650494	128943280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722109_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128942396
ES.37632.1	chrX	-	189	1	Intergenic	novelGene_30855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATACAAGCATACAG	NA	False	NA	NA	False	NA	NA	NA	128660521	128660332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128660300_128660500
ES.37633.1	chrX	-	156	1	Intergenic	novelGene_30856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	128756555	128756399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128756400_128756600
ES.37634.1	chrX	-	3547	1	Intergenic	novelGene_30857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	128834825	128831278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_128831300_128834800
ES.37635.1	chrX	-	258	1	Intergenic	novelGene_30861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	129067986	129067728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_129067700_129068000
ES.37636.1	chrX	-	176	1	Intergenic	novelGene_30862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	129068219	129068043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_129068000_129068200
ES.37637.1	chrX	-	4629	1	Intergenic	novelGene_30864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTTAAAATGGGTACAG	NA	False	NA	NA	False	NA	NA	NA	129352827	129348198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_129348200_129352800
ES.37638.1	chrX	-	156	1	Intergenic	novelGene_30866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	129440329	129440173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_129440200_129440300
ES.37639.1	chrX	+	194	1	Intergenic	novelGene_30867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAATGACACATC	NA	False	NA	NA	False	NA	NA	NA	129455711	129455905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_129455700_129455900
ES.3764.1	chr10	-	182	1	Intergenic	novelGene_2858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTAAGACT	3246	False	NA	NA	False	NA	NA	NA	115312374	115312192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_115312200_115312400
ES.37640.1	chrX	-	202	1	Intergenic	novelGene_30868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAATTTAATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	129475469	129475267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_129475300_129475500
ES.37641.1	chrX	+	176	1	Intergenic	novelGene_30869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGTATAAAA	4777	False	NA	NA	False	NA	NA	NA	130529357	130529533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_130529400_130529500
ES.37642.1	chrX	+	178	1	Intergenic	novelGene_30870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	130781351	130781529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_130781400_130781500
ES.37643.1	chrX	+	176	1	Intergenic	novelGene_30871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATGCTTAT	NA	False	NA	NA	False	NA	NA	NA	132500990	132501166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_132501000_132501200
ES.37644.1	chrX	+	4523	1	Antisense	novelGene_ENSMUSG00000051323.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCAACTCGCTTAGTTTG	NA	False	NA	NA	False	NA	NA	NA	132526097	132530620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_132526100_132530600
ES.37645.1	chrX	-	5693	1	ISM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	100423	12	-553	3	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTGAAATGTGTCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	132489313	132483620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_132483600_132489300
ES.37645.10	chrX	-	4970	1	NIC	ENSMUSG00000051323.17	novel	10289	6	NA	NA	3784	5082	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	GATAAA	-33	NA	132581956	132576986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_132577000_132582000
ES.37645.11	chrX	-	3090	2	ISM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-711	98302	-711	143	5prime_fragment	FALSE	canonical	3	21	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAACACCACTGCCAGCCA	NA	False	NA	NA	False	NA	NA	NA	132588724	132581925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_132582158_132585866
ES.37645.2	chrX	-	2199	1	ISM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	103788	141	2812	-121	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGTTACCTGCCACA	NA	False	NA	NA	False	ATTAAA	-19	NA	132485948	132483749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_132483700_132485900
ES.37645.3	chrX	-	3116	6	FSM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	3648	3525	-348	-3505	multi-exon	FALSE	canonical	3	7	junction_2	6.79411510058521	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTTTCCTCTGCCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	132586088	132487133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132582840_132582982_132585866
ES.37645.4	chrX	-	6626	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-1730	3511	-7	-3506	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTTTCCTCTGCCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	132589743	132487134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
ES.37645.5	chrX	-	5481	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-1788	4714	-65	-4709	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132589801	132488337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
ES.37645.7	chrX	-	5641	6	NIC	ENSMUSG00000051323.17	novel	10289	6	NA	NA	-84	-4709	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	6.04648658313239	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132589820	132488337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132582840_132582982_132585866
ES.37645.8	chrX	-	5019	3	NIC	ENSMUSG00000051323.17	novel	8407	5	NA	NA	9	-4710	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAACAAAGCTCTGGAC	NA	False	NA	NA	False	NA	NA	NA	132589727	132488338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_132489327_132526017_132526188_132585866
ES.37645.9	chrX	-	4281	6	FSM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	1243	4765	-480	-4745	multi-exon	FALSE	canonical	3	7	junction_2	6.79411510058521	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGCAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	132588493	132488373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132582840_132582982_132585866
ES.37646.1	chrX	+	307	1	Intergenic	novelGene_30872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAGAAGTTACTCAGG	NA	False	NA	NA	False	NA	NA	NA	132628842	132629149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_132628800_132629100
ES.37647.1	chrX	-	4138	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	114	-2487	-21	2487	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132799064	132789329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ES.37647.2	chrX	-	1683	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	78	4	-57	-4	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCGTTTTAATTTT	NA	False	NA	0	True	AATAAA	-38	NA	132799100	132791820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ES.37647.3	chrX	-	1061	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	28	676	28	-676	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATACCCTGTTTCCCT	NA	False	NA	NA	False	AGTAAA	-10	NA	132799150	132792492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ES.37648.1	chrX	-	3689	17	NIC	ENSMUSG00000031255.15	novel	3753	17	NA	NA	-7	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.484122918275927	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTACATTTGAGAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	132882539	132837148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_132838800_132841071_132841281_132841990_132842091_132844308_132844418_132848485_132848648_132849439_132849543_132849795_132849975_132851020_132851117_132851859_132851964_132852075_132852167_132852497_132852574_132853015_132853118_132861415_132861522_132861757_132861868_132862431_132862648_132862873_132863020_132882410
ES.37649.1	chrX	+	4602	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	-95	-5	-85	5	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTAGAAATCTTTTGTG	NA	False	NA	17	True	AATAAA	-17	NA	132959850	132987573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.10	chrX	+	5827	9	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_3	232.130216688823	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAGTTTTGCTTTTTA	NA	False	NA	3	True	AATAAA	-18	NA	132959943	132976611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261
ES.37649.11	chrX	+	4567	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	232.87177868115	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959943	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.13	chrX	+	2207	16	NIC	ENSMUSG00000031256.12	novel	3661	14	NA	NA	0	-1591	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	269.865760868045	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGATATACATAAT	NA	False	NA	24	True	AATAAA	-24	NA	132959945	132985204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973426_132973514_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.14	chrX	+	6119	12	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	1	-1590	intron_retention	FALSE	canonical	3	578	junction_10	53.6627053959565	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGATATACATAATC	NA	False	NA	25	True	AATAAA	-25	NA	132959946	132985205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.15	chrX	+	6389	10	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	1	-1590	intron_retention	FALSE	canonical	0	0	junction_3	221.878567611728	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGATATACATAATC	NA	False	NA	25	True	AATAAA	-25	NA	132959946	132985205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132963116_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.16	chrX	+	4286	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	227.283535601582	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132959946	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.17	chrX	+	8346	11	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_3	207.792420458495	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	132959947	132987570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.18	chrX	+	4479	15	NIC	ENSMUSG00000031256.12	novel	3661	14	NA	NA	7	2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_9	232.70004560483	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	132959952	132987570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.19	chrX	+	2187	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	9	-1593	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	232.87177868115	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAAATTGATATACATA	NA	False	NA	22	True	AATAAA	-22	NA	132959954	132985202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.2	chrX	+	4521	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	-84	-776	-84	3	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959851	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.20	chrX	+	6909	10	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	-8	3647	intron_retention	FALSE	canonical	3	451	junction_7	86.2263744704657	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTCTGGAGAGGTAGC	NA	False	NA	NA	False	NA	NA	NA	132959955	132980259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ES.37649.21	chrX	+	7070	8	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	-5	4	intron_retention	FALSE	canonical	3	610	junction_3	42.114518316861	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTGCTTTTTAAAAAA	NA	False	NA	8	True	AATAAA	-23	NA	132959958	132976616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261
ES.37649.22	chrX	+	2336	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	43	2123	25	-1350	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTCTAGAGTCTCAG	NA	False	NA	NA	False	AGTAAA	-22	NA	132959988	132985445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.23	chrX	+	2005	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	66	1590	38	-1590	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATTGATATACATAATC	NA	False	NA	25	True	AATAAA	-25	NA	132960001	132985205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.24	chrX	+	5084	13	NIC	ENSMUSG00000031256.12	novel	3661	14	NA	NA	-18	3	intron_retention	FALSE	canonical	3	157	junction_8	152.982819478383	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960041	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.25	chrX	+	8212	12	NIC	ENSMUSG00000031256.12	novel	3661	14	NA	NA	5	-1594	intron_retention	FALSE	canonical	3	157	junction_8	158.776832833471	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTACAAATTGATATACAT	NA	False	NA	21	True	AATAAA	-21	NA	132960064	132985201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132982066_132984980
ES.37649.26	chrX	+	6379	9	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	9	2	intron_retention	FALSE	canonical	3	610	junction_4	41.0866082197107	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTTTGCTTTTTAAAA	NA	False	NA	6	True	AATAAA	-21	NA	132960068	132976614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261
ES.37649.27	chrX	+	1560	6	ISM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	107	12313	11	917	5prime_fragment	FALSE	canonical	3	610	junction_5	49.9399639567351	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTACCTGTTGC	NA	False	NA	NA	False	GATAAA	-22	NA	132960070	132964299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346
ES.37649.3	chrX	+	2794	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	-53	-24	-25	24	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGGGTTTTGATTTT	NA	False	NA	28	True	AATAAA	-43	NA	132959910	132976636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ES.37649.30	chrX	+	2456	10	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	224.158894261511	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAGTTTTGCTTTTTA	NA	False	NA	3	True	AATAAA	-18	NA	132960086	132976611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ES.37649.32	chrX	+	4565	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	5	3	intron_retention	FALSE	canonical	3	451	junction_8	79.5490763966217	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960087	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.33	chrX	+	4566	13	NNC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_5	199.468651811646	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960087	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963581_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.34	chrX	+	3464	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	9	-1593	intron_retention	FALSE	canonical	3	27	junction_8	187.215320924568	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAAATTGATATACATA	NA	False	NA	22	True	AATAAA	-22	NA	132960091	132985202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.35	chrX	+	3576	15	NNC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	216.628443776576	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960093	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980_132985170_132985869
ES.37649.36	chrX	+	2726	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	15	-1604	intron_retention	FALSE	canonical	3	451	junction_8	81.1700461308782	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTTAACATACTACAAAT	NA	False	NA	11	True	AATAAA	-11	NA	132960097	132985191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.37	chrX	+	2511	3	FSM	ENSMUSG00000031256.12	ENSMUST00000148080.2	743	3	38	-1806	15	669	multi-exon	FALSE	canonical	3	713	junction_2	23	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAAACAGTTAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	132960097	132964051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693
ES.37649.38	chrX	+	7572	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	21	0	intron_retention	FALSE	canonical	3	578	junction_10	51.8922494748065	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960103	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.39	chrX	+	5203	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	24	-1593	intron_retention	FALSE	canonical	3	578	junction_10	51.8922494748065	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAAATTGATATACATA	NA	False	NA	22	True	AATAAA	-22	NA	132960106	132985202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.4	chrX	+	2169	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	-22	2355	-12	-1582	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACATAATCCTTTTGCT	NA	False	NA	33	True	AATAAA	-33	NA	132959923	132985213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.40	chrX	+	5160	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	27	0	intron_retention	FALSE	canonical	2	3	junction_10	277.713302834827	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960109	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973426_132973514_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.41	chrX	+	2874	11	NNC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	27	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	213.417923333538	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTGCTTTTTAAAAAA	NA	False	NA	8	True	AATAAA	-23	NA	132960109	132976616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132960471_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ES.37649.43	chrX	+	4254	14	NNC	ENSMUSG00000031256.12	novel	3661	14	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	221.360959873716	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132960111	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132960172_132961392_132961472_132961693_132961857_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.44	chrX	+	1834	12	ISM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	1745	2366	-1455	-1593	3prime_fragment	FALSE	canonical	3	451	junction_6	76.2684471656389	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAAATTGATATACATA	NA	False	NA	22	True	AATAAA	-22	NA	132961690	132985202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.45	chrX	+	4944	12	NNC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	-1429	-1592	intron_retention	FALSE	canonical	0	0	junction_6	196.265042588202	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAATTGATATACATAA	NA	False	NA	23	True	AATAAA	-23	NA	132961716	132985203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132973792_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.46	chrX	+	4426	8	NNC	ENSMUSG00000031256.12	novel	574	5	NA	NA	394	0	intron_retention	FALSE	canonical	0	0	junction_1	232.044858435887	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132963539	132987568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_132963581_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.47	chrX	+	1864	5	ISM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	7045	2	-1	-2	3prime_fragment	FALSE	canonical	3	451	junction_2	105.878172915856	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAAGTTTTGCTTTTT	NA	False	NA	2	True	AATAAA	-17	NA	132967008	132976610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ES.37649.48	chrX	+	3635	8	ISM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	7063	-2	-1	2	3prime_fragment	FALSE	canonical	3	451	junction_2	83.0711521921456	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	132967008	132987570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.49	chrX	+	9222	2	NIC	ENSMUSG00000031256.12	novel	7514	12	NA	NA	8425	3	intron_retention	FALSE	canonical	3	609	junction_1	0	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132975434	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132982066_132984980
ES.37649.5	chrX	+	5269	13	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	-1	3	intron_retention	FALSE	canonical	3	451	junction_8	81.1700461308782	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959934	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.50	chrX	+	8358	1	Genic_Genomic	ENSMUSG00000031256.12	novel	NA	NA	NA	NA	12203	2	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTACTTAGAAATCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	132979212	132987570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_132979200_132987600
ES.37649.6	chrX	+	2311	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	5	1345	-5	-1345	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGAGTCTCAGAGCTT	NA	False	NA	NA	False	AGTAAA	-27	NA	132959940	132985450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ES.37649.7	chrX	+	2668	11	ISM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	5	10177	-5	6	5prime_fragment	FALSE	canonical	3	157	junction_8	166.206979396173	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTTTTTAAAAAATG	NA	False	NA	10	True	AATAAA	-25	NA	132959940	132976618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261
ES.37649.8	chrX	+	8491	12	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	-5	3	intron_retention	FALSE	canonical	3	578	junction_10	53.6627053959565	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTTAGAAATCTTTTG	NA	False	NA	15	True	AATAAA	-15	NA	132959940	132987571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261_132975555_132981075_132982066_132984980
ES.37649.9	chrX	+	5967	10	NIC	ENSMUSG00000031256.12	novel	2717	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	610	junction_5	38.8609423394	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132959941	132976612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132974027_132974874_132975060_132975261
ES.3765.1	chr10	+	161	1	Intergenic	novelGene_2859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	56	False	NA	NA	False	NA	NA	NA	115401320	115401481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115401300_115401500
ES.37650.1	chrX	-	172	1	Intergenic	novelGene_30873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGATGGTGACAGGG	NA	False	NA	NA	False	NA	NA	NA	132983212	132983040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_132983000_132983200
ES.37651.1	chrX	+	181	1	Intergenic	novelGene_30874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	133053551	133053732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_133053600_133053700
ES.37652.1	chrX	-	3677	1	Antisense	novelGene_ENSMUSG00000052549.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGGTCTGGAGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	133110231	133106554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_133106600_133110200
ES.37653.1	chrX	+	180	1	Intergenic	novelGene_30875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATTCAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	133117241	133117421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_133117200_133117400
ES.37654.1	chrX	-	3592	15	Fusion	ENSMUSG00000067369.13_ENSMUSG00000031257.15	novel	3128	14	NA	NA	-5	2194	multi-exon	TRUE	non_canonical	0	0	junction_1	17.0654502383246	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTACGTTGTGTATCCTT	NA	False	NA	NA	False	NA	NA	NA	133177681	133120893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133122780_133122821_133122947_133125331_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.10	chrX	-	3092	13	NIC	ENSMUSG00000067369.13	novel	3128	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	15.4668103441602	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	-6	True	AATAAA	-22	NA	133177684	133123844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133168079_133168311_133171258_133171335_133177594
ES.37654.11	chrX	-	4453	11	NIC	ENSMUSG00000067369.13	novel	3119	13	NA	NA	22	0	intron_retention	FALSE	canonical	1	3	junction_8	16.0514796825713	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	-6	True	AATAAA	-22	NA	133177709	133123844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133138992_133139215_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133167009_133167065_133168079_133168311_133177594
ES.37654.13	chrX	-	3550	13	NNC	ENSMUSG00000067369.13	novel	3119	13	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.8823801742686	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTATCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-21	NA	133177723	133123845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133164075_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.14	chrX	-	4239	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	33793	-2	intron_retention	FALSE	canonical	3	38	junction_3	1.63299316185545	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTCACTATCTCTA	NA	False	NA	-12	True	AATAAA	-16	NA	133143876	133123850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133141319_133141725_133141821_133143763
ES.37654.15	chrX	-	3125	14	FSM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	0	3	0	-3	multi-exon	FALSE	canonical	1	5	junction_12	15.8476474277441	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTATTCACTATCTCT	NA	False	NA	-13	True	AATAAA	-15	NA	133177669	133123851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
ES.37654.16	chrX	-	2963	12	NIC	ENSMUSG00000067369.13	novel	3119	13	NA	NA	21	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.0386928838197	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAATTAACTGTATTCAC	NA	False	NA	-20	True	AATAAA	-8	NA	133177710	133123858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133138992_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.17	chrX	-	1957	12	ISM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	9378	1001	9378	-1001	3prime_fragment	FALSE	canonical	1	13	junction_4	11.7936808966034	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTAAGCCTTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	133168291	133124849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ES.37654.18	chrX	-	942	5	ISM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	16	39390	16	3	5prime_fragment	FALSE	canonical	3	42	junction_1	5.7227615711298	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCTCCGCATTGTC	NA	False	NA	-4	True	AGTAAA	-17	NA	133177715	133163233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.19	chrX	-	1715	4	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	23	3	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGTCTCCGCATTGTC	NA	False	NA	-4	True	AGTAAA	-17	NA	133177646	133163233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.2	chrX	-	3423	15	Fusion	ENSMUSG00000067369.13_ENSMUSG00000031257.15	novel	3128	14	NA	NA	-5	2194	multi-exon	FALSE	canonical	0	0	junction_1	20.0499376557634	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTACGTTGTGTATCCTT	NA	False	NA	NA	False	NA	NA	NA	133177681	133120893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133122302_133122561_133122947_133125331_133125455_133138891_133138992_133139215_133139336_133140806_133140930_133141075_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.20	chrX	-	1721	3	NIC	ENSMUSG00000067369.13	novel	822	4	NA	NA	21	0	intron_retention	FALSE	canonical	3	4	junction_1	23	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTGTCTCCGCATT	NA	False	NA	-7	True	AGTAAA	-14	NA	133177710	133163236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133164611_133168079_133168311_133177594
ES.37654.21	chrX	-	3248	1	NIC	ENSMUSG00000067369.13	novel	4099	12	NA	NA	11185	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTGTCTCCGCATT	NA	False	NA	-7	True	AGTAAA	-14	NA	133166484	133163236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133163200_133166500
ES.37654.3	chrX	-	3373	15	Fusion	ENSMUSG00000067369.13_ENSMUSG00000031257.15	novel	3128	14	NA	NA	-9	2189	multi-exon	FALSE	canonical	0	0	junction_1	17.0654502383246	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCATTACGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	133177685	133120898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133122302_133122561_133122947_133125331_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.4	chrX	-	3513	14	Fusion	ENSMUSG00000067369.13_ENSMUSG00000031257.15	novel	3128	14	NA	NA	-17	2189	multi-exon	TRUE	canonical	0	0	junction_1	20.7569764418115	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCATTACGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	133177693	133120898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133122794_133122829_133122947_133125331_133125455_133138891_133138992_133140827_133140930_133141075_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.5	chrX	-	3582	14	Fusion	ENSMUSG00000067369.13_ENSMUSG00000031257.15	novel	3128	14	NA	NA	-9	2138	multi-exon	FALSE	canonical	1	3	junction_1	14.8280080417164	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGACTGGCTTACTC	NA	False	NA	NA	False	NA	NA	NA	133177685	133120949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133122947_133125331_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.6	chrX	-	3108	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	16	-5	16	5	multi-exon	FALSE	canonical	1	13	junction_4	11.7686022959398	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTAGTCCATGTTTTT	NA	False	NA	0	True	AATAAA	-28	NA	133177715	133123838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ES.37654.8	chrX	-	2984	10	NIC	ENSMUSG00000067369.13	novel	3237	12	NA	NA	9410	0	intron_retention	FALSE	canonical	0	0	junction_2	15.0833077552474	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	-6	True	AATAAA	-22	NA	133168259	133123844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133138992_133140827_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079
ES.37654.9	chrX	-	3032	13	NIC	ENSMUSG00000067369.13	novel	3128	14	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.7727639591688	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTATCTCTAGTCCAT	NA	False	NA	-6	True	AATAAA	-22	NA	133177689	133123844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133125455_133138891_133138992_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
ES.37655.1	chrX	+	1674	2	FSM	ENSMUSG00000033578.8	ENSMUST00000037687.8	1918	2	243	1	243	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACATGGTGTGGATATGG	NA	False	NA	5	True	AATAAA	-17	NA	133196216	133206717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133196379_133205205
ES.37656.1	chrX	+	216	1	Intergenic	novelGene_30876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTCTCACTAGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	133206908	133207124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_133206900_133207100
ES.37657.1	chrX	+	3233	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	-2	-4	-2	4	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGAATTTTTTTTTTTT	NA	False	NA	10	True	AATAAA	-21	NA	133208830	133263392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.10	chrX	+	3088	23	NNC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.3193464298065	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208894	133263385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133208978_133209314_133209383_133209549_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.11	chrX	+	3789	22	ISM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	62	2	-9	0	intron_retention	FALSE	canonical	3	156	junction_9	43.2797156511924	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208894	133263386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963
ES.37657.12	chrX	+	3259	22	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-8	2	intron_retention	FALSE	canonical	3	156	junction_8	43.2155384837434	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCGAATTTTTTTTTT	NA	False	NA	8	True	AATAAA	-19	NA	133208895	133263390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.13	chrX	+	3228	23	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	59.0381057782539	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208895	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133209047_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.14	chrX	+	3628	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	63	-464	-8	464	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTCATTAATAATTTAAT	NA	False	NA	NA	False	NA	NA	NA	133208895	133263852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.15	chrX	+	3715	21	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-6	2	-6	-2	intron_retention	FALSE	canonical	3	75	junction_1	52.6831092476517	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208897	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963
ES.37657.16	chrX	+	3456	23	NNC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_20	72.9922445784142	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208901	133263385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133255038_133255247_133261963_133262006_133262631
ES.37657.17	chrX	+	3056	21	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	62.1482099500863	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208902	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.18	chrX	+	3078	22	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_15	59.3065750256229	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208914	133263386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.19	chrX	+	3050	22	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	61.4879004744991	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208915	133263386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.2	chrX	+	3103	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-12	-6	-12	3	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGAATTTTTTTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	133208891	133263391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.20	chrX	+	3653	21	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_6	59.5839533767272	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208921	133263385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963
ES.37657.21	chrX	+	2950	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	64.4130421576252	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208928	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.23	chrX	+	3157	21	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_6	63.2335947104069	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208941	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.24	chrX	+	5130	21	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	2	2	intron_retention	FALSE	canonical	3	156	junction_9	43.4827264554558	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCGAATTTTTTTTTT	NA	False	NA	8	True	AATAAA	-19	NA	133208949	133263390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.26	chrX	+	3084	22	ISM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	477	3	362	0	3prime_fragment	FALSE	canonical	3	156	junction_8	43.2473243768865	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133209309	133263385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.27	chrX	+	2999	22	NNC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	625	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.4731289595279	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133209572	133263385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133209597_133210889_133211122_133211212_133211298_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.28	chrX	+	3204	14	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	12039	-2	intron_retention	FALSE	canonical	1	1	junction_5	51.5608447376415	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133224785	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.3	chrX	+	3752	16	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	-12	17486	-12	-3	5prime_fragment	FALSE	canonical	3	75	junction_1	59.2754024308004	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTTTCATGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	133208891	133245899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824
ES.37657.30	chrX	+	1190	5	ISM	ENSMUSG00000031262.13	ENSMUST00000125604.2	1728	6	2334	3	2334	-2	3prime_fragment	FALSE	canonical	3	171	junction_2	14.0956553590104	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133249905	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.4	chrX	+	2000	2	NIC	ENSMUSG00000031262.13	novel	398	4	NA	NA	-11	1186	intron_retention	FALSE	canonical	3	309	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCAGGCGGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	133208892	133212185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133209597_133210889
ES.37657.5	chrX	+	3599	21	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-10	3	intron_retention	FALSE	canonical	3	156	junction_7	44.2429655425583	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGAATTTTTTTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	133208893	133263391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.6	chrX	+	2158	17	ISM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	62	19148	-9	-1662	5prime_fragment	FALSE	canonical	3	156	junction_9	46.4320319795505	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTTAATGGTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	133208894	133244240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824
ES.37657.7	chrX	+	3291	1	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	-9	1186	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCAGGCGGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	133208894	133212185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133208900_133212200
ES.37657.8	chrX	+	10185	22	NNC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-9	0	intron_retention	TRUE	non_canonical	0	0	junction_5	84.4505517543253	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTATTTCCGAATTTTTT	NA	False	NA	4	True	AATAAA	-15	NA	133208894	133263386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133221117_133221153_133221467_133221531_133224272_133224486_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37657.9	chrX	+	3525	20	NIC	ENSMUSG00000031262.13	novel	3085	22	NA	NA	-9	-2	intron_retention	FALSE	canonical	2	14	junction_13	62.1136479620856	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGGTATTTCCGAATTT	NA	False	NA	1	True	AATAAA	-12	NA	133208894	133263383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ES.37658.1	chrX	-	5177	1	Antisense	novelGene_ENSMUSG00000031262.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATCCCAAATT	NA	False	NA	NA	False	NA	NA	NA	133225511	133220334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_133220300_133225500
ES.37658.2	chrX	-	4551	3	Antisense	novelGene_ENSMUSG00000031262.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTACAATTTATTCCCA	NA	False	NA	NA	False	AATAAA	-25	NA	133225511	133220643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_133221467_133221568_133224266_133224480
ES.37658.3	chrX	-	1235	1	Antisense	novelGene_ENSMUSG00000031262.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAGAGTATTCTGGT	NA	False	NA	NA	False	NA	NA	NA	133225511	133224276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_133224300_133225500
ES.37659.1	chrX	+	6013	1	Intergenic	novelGene_30877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAGAAAAAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	133264447	133270460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_133264400_133270500
ES.3766.1	chr10	-	192	1	Genic_Genomic	ENSMUSG00000112099.2	novel	NA	NA	NA	NA	1184	73	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAATGGATCAACAAAT	NA	False	NA	NA	False	AATAAA	-45	NA	115435049	115434857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_115434900_115435000
ES.37660.1	chrX	+	3561	21	ISM	ENSMUSG00000000223.14	ENSMUST00000113224.9	4147	24	23431	215	4381	1	3prime_fragment	FALSE	canonical	0	0	junction_6	1.52561463023924	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTTTCCCCATGCTCC	NA	False	NA	NA	False	ATTAAA	-20	NA	133328959	133354150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133329227_133331223_133331381_133332279_133332401_133334539_133334809_133335173_133335321_133335771_133335851_133337769_133337831_133338158_133338221_133339567_133339643_133340668_133340871_133341083_133341170_133341977_133342136_133342410_133342578_133344400_133344513_133346963_133347101_133347376_133347443_133347710_133347777_133348596_133348741_133350400_133350639_133352916_133353038_133353324
ES.37661.1	chrX	-	1870	13	FSM	ENSMUSG00000009596.10	ENSMUST00000113223.3	1155	13	-272	-443	-272	3	multi-exon	FALSE	canonical	1	1	junction_12	6.36559764148924	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTCTCTAATTTCTAAC	NA	False	NA	NA	False	NA	NA	NA	133376014	133360863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371236_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133375672
ES.37661.2	chrX	-	1715	13	NIC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	5.80708379672812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGTCTCTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	133375754	133360866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133375672
ES.37661.3	chrX	-	1985	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	-53	1	-53	-1	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACGTCTCTAATTTC	NA	False	NA	NA	False	NA	NA	NA	133377292	133360867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
ES.37661.4	chrX	-	1810	13	NNC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	-10	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.39009650422694	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAACTGAAAA	NA	False	NA	NA	False	NA	NA	NA	133377249	133360889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133361415_133365048_133365107_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371236_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
ES.37661.5	chrX	-	1804	12	NIC	ENSMUSG00000009596.10	novel	1933	13	NA	NA	4	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	6.05074956083409	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAACTGAAAA	NA	False	NA	NA	False	NA	NA	NA	133377235	133360889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
ES.37662.1	chrX	-	178	1	Intergenic	novelGene_30878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATCTAAAAGACGCA	NA	False	NA	NA	False	NA	NA	NA	133381887	133381709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133381700_133381900
ES.37663.1	chrX	-	207	1	Intergenic	novelGene_30879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTACTTAGGCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	133416153	133415946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133415900_133416200
ES.37664.1	chrX	-	4237	1	Intergenic	novelGene_30880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCGCATGTTGAATTTG	NA	False	NA	NA	False	NA	NA	NA	133425805	133421568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133421600_133425800
ES.37665.1	chrX	-	5475	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	222	-4276	222	4276	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATATGTTGGAATCTATA	NA	False	NA	NA	False	GATAAA	-12	NA	133442392	133433728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.11	chrX	-	159	1	Intergenic	novelGene_30881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATTAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133440782	133440623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133440600_133440800
ES.37665.2	chrX	-	3859	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	199	-2637	199	2637	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCGATTTTGCAAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	133442415	133435367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.3	chrX	-	7027	1	Genic_Genomic	ENSMUSG00000048007.5	novel	NA	NA	NA	NA	220	2637	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCGATTTTGCAAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	133442394	133435367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_133435400_133442400
ES.37665.4	chrX	-	2359	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	224	-1162	224	1162	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTATGTGAGGTCTGT	NA	False	NA	NA	False	AATACA	-12	NA	133442390	133436842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.5	chrX	-	2264	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	218	-1061	218	1061	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCCTCCTGATTTCTC	NA	False	NA	NA	False	NA	NA	NA	133442396	133436943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.6	chrX	-	1899	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	225	-703	225	703	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACACTGGCCTGTGTGA	NA	False	NA	NA	False	ACTAAA	-12	NA	133442389	133437301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.7	chrX	-	1428	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	3	-10	3	10	multi-exon	FALSE	canonical	3	1175	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGCTTTCTGTTTTGGG	NA	False	NA	0	True	AATAAA	-26	NA	133442611	133437994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.8	chrX	-	855	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	27	539	27	-539	multi-exon	FALSE	canonical	3	1175	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCTTTCTAGAATTTG	NA	False	NA	NA	False	TATAAA	-16	NA	133442587	133438543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37665.9	chrX	-	776	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	-44	689	-44	-689	multi-exon	FALSE	canonical	3	1175	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGAGTCATGTGTATT	NA	False	NA	NA	False	AATGAA	-25	NA	133442658	133438693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133439017_133442205
ES.37666.1	chrX	-	2521	19	FSM	ENSMUSG00000031264.14	ENSMUST00000033617.13	2540	19	20	-1	8	1	multi-exon	FALSE	canonical	1	1	junction_10	2.60104442460436	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATTTTAATTTATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	133483869	133443083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133443557_133446230_133446389_133447460_133447580_133448310_133448376_133450163_133450381_133451055_133451228_133451950_133452026_133455147_133455276_133455437_133455518_133456297_133456353_133457086_133457150_133457536_133457725_133459435_133459504_133459946_133460076_133466345_133466428_133469653_133469723_133473957_133474057_133474665_133474837_133483759
ES.37666.2	chrX	-	160	1	Intergenic	novelGene_30882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	133448990	133448830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133448800_133449000
ES.37666.3	chrX	-	196	1	Intergenic	novelGene_30883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCAGTAACATATATGC	NA	False	NA	NA	False	NA	NA	NA	133476129	133475933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133475900_133476100
ES.37667.1	chrX	+	514	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	-27	-4	-27	-2	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTCTCCTGTTGAGT	NA	False	NA	79	True	ATTAAA	-20	NA	133486375	133488809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ES.37667.3	chrX	+	843	4	FSM	ENSMUSG00000079435.10	ENSMUST00000172023.8	812	4	-33	2	2	-2	multi-exon	FALSE	canonical	3	10431	junction_3	1438.31622237794	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTCTCCTGTTGAGT	NA	False	NA	79	True	ATTAAA	-20	NA	133486404	133488809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133486933_133487259_133487328_133488199_133488323_133488685
ES.37667.4	chrX	+	292	4	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6016.59318514685	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGAAGTTTTTCTCC	NA	False	NA	71	True	ATTAAA	-12	NA	133486434	133488801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133486469_133486826_133486933_133487259_133487332_133488721
ES.37667.5	chrX	+	1321	4	NIC	ENSMUSG00000079435.10	novel	483	5	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	10431	junction_3	1463.22231925144	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAAGTTTTTCTCCTGT	NA	False	NA	74	True	ATTAAA	-15	NA	133486435	133488804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133486469_133486826_133486933_133487259_133488323_133488685
ES.37667.6	chrX	+	2005	2	FSM	ENSMUSG00000079435.10	ENSMUST00000152266.2	553	2	-1393	-59	-1	-1	multi-exon	FALSE	canonical	3	10431	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAAGTTTTTCTCCTGT	NA	False	NA	74	True	ATTAAA	-15	NA	133486436	133488804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133488323_133488685
ES.37667.9	chrX	+	257	3	ISM	ENSMUSG00000079435.10	ENSMUST00000149857.3	770	4	809	32	420	5	3prime_fragment	FALSE	canonical	3	10431	junction_2	1199.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTGCAGTTGTTCGT	NA	False	NA	20	True	AATAAA	-19	NA	133487258	133488750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133487328_133488199_133488323_133488685
ES.37668.1	chrX	-	2909	7	NNC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	67.2672943479139	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTTATCATTTGTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	133501712	133488898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133490877_133491694_133491893_133492813_133492876_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.2	chrX	-	3040	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	4	-29	4	-8	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCGTTTTCTTATCAT	NA	False	NA	NA	False	AATAAA	-8	NA	133501750	133488905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.3	chrX	-	5312	5	NIC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	54	-14	intron_retention	FALSE	canonical	3	153	junction_3	12.6565200588471	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACACTGCGTTTTCT	NA	False	NA	NA	False	AATAAA	-2	NA	133501700	133488911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133490877_133491694_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.4	chrX	-	6794	1	NIC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	5338	17	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTCTCTACACTGCG	NA	False	NA	NA	False	NA	NA	NA	133495711	133488917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133488900_133495700
ES.37668.5	chrX	-	400	2	NNC	ENSMUSG00000031266.8	novel	3015	7	NA	NA	10235	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	133490814	133488934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133488990_133490469
ES.37668.6	chrX	-	5193	5	NIC	ENSMUSG00000031266.8	novel	3015	7	NA	NA	47	0	intron_retention	FALSE	canonical	3	153	junction_3	21.9359864150213	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	133501707	133488934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133491893_133492813_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.7	chrX	-	2824	7	NNC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	54	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.4355659541429	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAAAGCTTATTACTG	NA	False	NA	NA	False	NA	NA	NA	133501700	133489075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133490877_133491690_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.8	chrX	-	1458	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	-25	1582	-25	-1582	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGCTTTTCAACATA	NA	False	NA	-19	True	AATAAA	-23	NA	133501779	133490516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ES.37668.9	chrX	-	2343	6	NIC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	4	-1585	intron_retention	FALSE	canonical	3	163	junction_5	16.7857082066858	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGCTGCTTTTCAAC	NA	False	NA	-22	True	AATAAA	-20	NA	133501750	133490519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133497199_133501486
ES.37669.1	chrX	+	2536	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	-161	-11	-54	5	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTTGATTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	133501873	133507814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ES.37669.10	chrX	+	2544	4	NNC	ENSMUSG00000045427.14	novel	2364	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	385.305362306602	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501989	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133502083_133503440_133503512_133503666_133503841_133505603
ES.37669.12	chrX	+	2294	2	FSM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	16	5	16	1	multi-exon	FALSE	canonical	2	6	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGCATAGTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	133501989	133507804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133502083_133505603
ES.37669.13	chrX	+	4297	3	NNC	ENSMUSG00000045427.14	novel	2364	4	NA	NA	16	0	intron_retention	FALSE	non_canonical	0	0	junction_1	92.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133501989	133507803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133502076_133503437_133503512_133503666
ES.37669.14	chrX	+	2388	3	NNC	ENSMUSG00000045427.14	novel	2426	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501999	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133502083_133503412_133503512_133505603
ES.37669.15	chrX	+	2344	3	NNC	ENSMUSG00000045427.14	novel	2426	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	298.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133502005	133507803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133502087_133503448_133503512_133505603
ES.37669.16	chrX	+	3754	3	NIC	ENSMUSG00000045427.14	novel	2364	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	164	junction_2	10.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133502008	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133503512_133503666_133503712_133505603
ES.37669.2	chrX	+	2483	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	-51	-6	-51	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501876	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133502083_133503440_133503512_133505603
ES.37669.3	chrX	+	4492	2	ISM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	32	-6	-14	0	intron_retention	FALSE	canonical	3	894	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501959	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133502083_133503440
ES.37669.4	chrX	+	4337	3	FSM	ENSMUSG00000045427.14	ENSMUST00000113202.8	3988	3	-47	-302	-14	0	multi-exon	FALSE	canonical	3	185	junction_2	354.5	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501959	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133502083_133503440_133503512_133503666
ES.37669.5	chrX	+	3745	2	NIC	ENSMUSG00000045427.14	novel	2426	3	NA	NA	-6	1	intron_retention	FALSE	canonical	3	597	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTTGCATAGTTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	133501967	133507804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133503512_133505603
ES.37669.9	chrX	+	5824	1	NIC	ENSMUSG00000045427.14	novel	2315	2	NA	NA	12	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	133501985	133507809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133502000_133507800
ES.3767.1	chr10	-	3803	1	Antisense	novelGene_ENSMUSG00000034127.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTCTCTGCCCCGGCGC	NA	False	NA	NA	False	NA	NA	NA	115672721	115668918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_115668900_115672700
ES.3767.2	chr10	-	787	1	Intergenic	novelGene_2860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTCAGTCTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	115672699	115671912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_115671900_115672700
ES.37670.1	chrX	+	8107	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	-111	0	-111	0	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGATATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-24	NA	133587156	133597506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
ES.37670.2	chrX	+	7966	6	NNC	ENSMUSG00000049804.10	novel	7996	6	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.74165738677394	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGAGATATTGTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	133587281	133597502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133587387_133587896_133587975_133588765_133588844_133589198_133589282_133589568_133589654_133589965
ES.37670.3	chrX	+	2557	6	NNC	ENSMUSG00000049804.10	novel	7996	6	NA	NA	36	-5409	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.32264954516723	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTGCCTAAGGCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	133587303	133592097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133587387_133587896_133587981_133588765_133588856_133589198_133589282_133589568_133589654_133589965
ES.37670.4	chrX	+	7646	5	NNC	ENSMUSG00000049804.10	novel	7996	6	NA	NA	655	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.8613807855649	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGATATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-24	NA	133587922	133597506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133590170
ES.37670.5	chrX	+	7536	1	NIC	ENSMUSG00000049804.10	novel	7996	6	NA	NA	2692	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGCAAAAGAAGAGATA	NA	False	NA	NA	False	AATAAA	-13	NA	133589959	133597495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133590000_133597500
ES.37671.1	chrX	+	2249	5	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	73.5272058492637	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618650	133622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619118_133619211_133619668_133619742_133620375_133620475_133620823
ES.37671.10	chrX	+	2429	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.5200969304382	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133618689	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619802_133620118_133620242_133620375_133620475_133620782
ES.37671.11	chrX	+	2903	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-58	-760	-8	751	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGAGTCGTAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	133618703	133623417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ES.37671.13	chrX	+	2311	5	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	26.9664142963057	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618705	133622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620823
ES.37671.14	chrX	+	2284	6	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7157515364467	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGCACTGTCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133618710	133622658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.15	chrX	+	2353	5	NIC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	47.1718931144384	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618710	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133618800_133619118_133619211_133619668_133619858_133620375_133620475_133620782
ES.37671.16	chrX	+	2447	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.5311382805458	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618712	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620782
ES.37671.17	chrX	+	2265	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	67.705243519243	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618712	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619404_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.18	chrX	+	2405	7	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	40.1026460750687	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133618715	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620118_133620253_133620375_133620475_133620823
ES.37671.19	chrX	+	2317	6	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	43.1323544453581	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618724	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620118_133620253_133620375_133620475_133620823
ES.37671.2	chrX	+	2189	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	-95	-9	-45	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618666	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ES.37671.20	chrX	+	2209	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113201.8	2228	5	15	4	8	-4	multi-exon	FALSE	canonical	3	45	junction_1	55.9955355363265	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133618726	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ES.37671.21	chrX	+	2366	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	46.4990322479942	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618738	133622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619404_133619568_133619668_133619742_133620118_133620253_133620375_133620475_133620823
ES.37671.22	chrX	+	2167	4	NNC	ENSMUSG00000033460.15	novel	2085	4	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.1013247220183	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133618738	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618863_133619668_133619742_133620375_133620475_133620782
ES.37671.23	chrX	+	2528	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	69.0724257573165	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618738	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.24	chrX	+	2189	5	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.9283223311695	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAAGGAAAAAAAGCACT	NA	False	NA	NA	False	AATAAA	-12	NA	133618746	133622651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619211_133619668_133619742_133620375_133620475_133620782
ES.37671.25	chrX	+	2963	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	-3	804	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTGTTGTTAATTT	NA	False	NA	NA	False	AAAACA	-17	NA	133618748	133623470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.26	chrX	+	2143	4	NNC	ENSMUSG00000033460.15	novel	2085	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	74.8613533288186	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAAAAAGCACTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	133618761	133622655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619668_133619802_133620375_133620475_133620782
ES.37671.27	chrX	+	1748	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	1	-599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.4699879903904	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTCTTAACATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	133618762	133622058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620823
ES.37671.28	chrX	+	2429	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.1137455301466	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618769	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620118_133620253_133620375_133620475_133620782
ES.37671.29	chrX	+	2304	3	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	3	-599	intron_retention	FALSE	canonical	3	112	junction_2	40	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTTCTTAACATTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	133618771	133622058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133619742_133620375_133620475_133620823
ES.37671.3	chrX	+	2229	5	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618671	133622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.30	chrX	+	2241	4	NNC	ENSMUSG00000033460.15	novel	951	2	NA	NA	239	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.1130503873347	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133619007	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133619090_133619668_133619858_133620375_133620475_133620782
ES.37671.31	chrX	+	2160	4	ISM	ENSMUSG00000033460.15	ENSMUST00000113197.2	2179	5	325	13	325	-4	3prime_fragment	FALSE	canonical	2	7	junction_1	76.9718563285742	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAAAAAAGCACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	133619093	133622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_133619211_133619668_133619742_133620375_133620475_133620782
ES.37671.32	chrX	+	2270	5	NNC	ENSMUSG00000033460.15	novel	2303	6	NA	NA	350	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.0724257573165	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133619118	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133619211_133619404_133619568_133619668_133619742_133620375_133620475_133620823
ES.37671.33	chrX	+	12056	2	Fusion	ENSMUSG00000081972.2_ENSMUSG00000033460.15	novel	2253	4	NA	NA	1403	717	multi-exon	TRUE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCACTGGCCTCCTCTTTG	NA	False	NA	NA	False	AATAAA	-34	NA	133621408	133633530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_133633111_133633176
ES.37671.4	chrX	+	2135	4	NNC	ENSMUSG00000033460.15	novel	2179	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618679	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
ES.37671.5	chrX	+	2251	4	NNC	ENSMUSG00000033460.15	novel	2253	4	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	53.074371299987	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618679	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619668_133619858_133620375_133620475_133620823
ES.37671.6	chrX	+	2439	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.4699879903904	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618679	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_133618800_133619115_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620823
ES.37671.7	chrX	+	2292	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	-39	0	-32	0	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618679	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
ES.37671.8	chrX	+	3125	5	NIC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	-27	745	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.5181111881864	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTGGATCTGAGTCGTA	NA	False	NA	NA	False	NA	NA	NA	133618684	133623411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620782
ES.37671.9	chrX	+	2356	6	FSM	ENSMUSG00000033460.15	ENSMUST00000035748.14	2303	6	-53	0	-27	0	multi-exon	FALSE	canonical	3	27	junction_1	61.3286230075321	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618684	133622666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ES.37672.1	chrX	+	2012	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	-26	1341	-26	-22	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACAACAGAAGAAGA	NA	False	NA	NA	False	AATAAA	-19	NA	133657317	133660833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ES.37672.2	chrX	+	3370	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	-11	-32	-11	2	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTAGAGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	133657332	133662206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ES.37673.1	chrX	-	177	1	Intergenic	novelGene_30884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	133665457	133665280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_133665300_133665500
ES.37674.1	chrX	-	3514	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	154	-2	-71	0	multi-exon	FALSE	canonical	3	17	junction_5	6.60302960768767	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709816	133704893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
ES.37674.2	chrX	-	3298	6	NNC	ENSMUSG00000033436.14	novel	3384	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.3506554146229	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709743	133704893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709106_133709667
ES.37674.3	chrX	-	3604	5	FSM	ENSMUSG00000033436.14	ENSMUST00000168264.2	3773	5	171	-2	-54	0	multi-exon	FALSE	canonical	3	17	junction_4	6.83282518435822	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709799	133704893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133707763_133708010_133708077_133708202_133708475_133708983_133709249_133709667
ES.37674.4	chrX	-	3474	6	NNC	ENSMUSG00000033436.14	novel	3666	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0230564768798	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709758	133704893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133707763_133708010_133708077_133708202_133708263_133708351_133708475_133708983_133709249_133709667
ES.37674.5	chrX	-	3178	5	NIC	ENSMUSG00000033436.14	novel	3384	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.3418095092635	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133709745	133704893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133709667
ES.37674.7	chrX	-	3393	5	NNC	ENSMUSG00000033436.14	novel	3384	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	15.5322245670091	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	133709745	133704895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133707763_133708010_133708146_133708369_133708475_133708983_133709192_133709667
ES.37674.8	chrX	-	3414	6	FSM	ENSMUSG00000033436.14	ENSMUST00000035559.11	3384	6	-30	0	-30	0	multi-exon	FALSE	canonical	2	3	junction_5	12.1556571192182	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTGTTCTGGTGCTT	NA	False	NA	-3	True	AATAAA	-19	NA	133709775	133704895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709192_133709667
ES.37675.1	chrX	+	178	1	Intergenic	novelGene_30885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAACT	NA	False	NA	NA	False	NA	NA	NA	133799616	133799794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_133799600_133799800
ES.37676.1	chrX	-	2387	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	6	0	6	0	multi-exon	TRUE	canonical	3	19	junction_3	6.66632652193486	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865497	133845276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ES.37676.2	chrX	-	2413	21	NIC	ENSMUSG00000009941.11	novel	2375	22	NA	NA	78	-1	intron_retention	FALSE	canonical	3	15	junction_3	7.38173421358423	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTTGAAGTGC	NA	False	NA	-3	True	AATAAA	-17	NA	133865425	133845277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ES.37676.3	chrX	-	2281	21	NIC	ENSMUSG00000009941.11	novel	2393	22	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	10.6136704301575	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTTGAAGTGC	NA	False	NA	-3	True	AATAAA	-17	NA	133865495	133845277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133862672_133862768_133865376
ES.37676.4	chrX	-	2309	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	65	1	65	-1	multi-exon	FALSE	canonical	3	15	junction_3	7.21770310384392	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTATGTCTTGAAGTGC	NA	False	NA	-3	True	AATAAA	-17	NA	133865438	133845277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ES.37676.5	chrX	-	3515	15	NIC	ENSMUSG00000009941.11	novel	2393	22	NA	NA	50	-3	intron_retention	FALSE	canonical	3	19	junction_3	7.50917805768653	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATTATGTCTTGAAGT	NA	False	NA	-5	True	AATAAA	-15	NA	133865453	133845279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133857953_133858216_133858320_133862672_133862768_133865376
ES.37677.1	chrX	+	969	1	Antisense	novelGene_ENSMUSG00000052676.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGCTATTGCAAAAC	923	False	NA	NA	False	AATAAA	-13	NA	133909611	133910580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_133909600_133910600
ES.37678.1	chrX	-	3637	8	Fusion	ENSMUSG00000052676.17_ENSMUSG00000089759.8	novel	3501	7	NA	NA	-121	0	multi-exon	FALSE	canonical	0	0	junction_4	1.92724822331886	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTTGTGATCTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	133937018	133872120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133930617_133930794_133936762
ES.37678.2	chrX	-	3877	9	Fusion	ENSMUSG00000052676.17_ENSMUSG00000089759.8	novel	3501	7	NA	NA	-139	0	multi-exon	FALSE	canonical	0	0	junction_4	1.8328597873269	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTTGTGATCTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	133937036	133872120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133925821_133926044_133930617_133930794_133936762
ES.37678.3	chrX	-	3758	9	Fusion	ENSMUSG00000052676.17_ENSMUSG00000089759.8	novel	3501	7	NA	NA	1249	0	multi-exon	FALSE	canonical	0	0	junction_4	1.87082869338697	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTTTGTGATCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	133935648	133872123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133925821_133926044_133930617_133930794_133935490
ES.37678.4	chrX	-	3540	8	NNC	ENSMUSG00000052676.17	novel	3501	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.98976975388345	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTTTGTGATCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	133909952	133872123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_133874776_133876066_133876112_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133909659
ES.37679.1	chrX	-	5329	7	NNC	ENSMUSG00000085556.2	novel	636	6	NA	NA	20	4777	intron_retention	FALSE	non_canonical	0	0	junction_1	10.6575481858321	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCCGTTTCTTTGAAC	1154	False	NA	NA	False	AATAAA	-21	NA	134053325	134018849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134021409_134021472_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
ES.37679.2	chrX	-	2762	1	Genic_Genomic	ENSMUSG00000081146.2	novel	NA	NA	NA	NA	2120	1858	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134021613	134018851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_134018900_134021600
ES.37679.3	chrX	-	3720	8	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	53	4775	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	7.74069553379661	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	1187	False	NA	NA	False	AATAAA	-19	NA	134053292	134018851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
ES.37679.4	chrX	-	8603	2	NNC	ENSMUSG00000081146.2	novel	1386	3	NA	NA	-3785	1858	intron_retention	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134027518	134018851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134021409_134021472
ES.37679.6	chrX	-	3673	7	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	1	4774	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	7.80313327381308	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATTATCCGTTTCTTTG	1135	False	NA	NA	False	AATAAA	-18	NA	134053344	134018852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134050176_134050266_134051692_134051783_134053202
ES.37679.8	chrX	-	1424	7	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	19	2543	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	7.80313327381308	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGGCCCTTTCACAGT	1153	False	NA	NA	False	ATTAAA	-30	NA	134053326	134021083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134021224_134022418_134023001_134023443_134023744_134044969_134045069_134050176_134050266_134051692_134051783_134053202
ES.37679.9	chrX	-	1911	7	NIC	ENSMUSG00000085556.2	novel	636	6	NA	NA	59	2529	intron_retention	FALSE	canonical	3	6	junction_3	8.34166250416147	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTATTGGGATGACTTTG	1193	False	NA	NA	False	ATTAAA	-16	NA	134053286	134021097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134021224_134022418_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
ES.3768.1	chr10	-	158	1	Intergenic	novelGene_2861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	115722020	115721862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_115721900_115722000
ES.37680.1	chrX	-	3843	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	26	163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.6801505234366	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCTTCGTGAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	134078355	134068209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077924_134078052_134078249
ES.37680.10	chrX	-	3895	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	26	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.324672937419	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134078355	134068213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077924_134078052_134078249
ES.37680.11	chrX	-	3935	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	159	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	109.126932972571	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134078351	134068213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077924_134078052_134078149
ES.37680.12	chrX	-	3713	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.6801505234366	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAGATTCATTTAATA	NA	False	NA	NA	False	AGTAAA	-19	NA	134078385	134068369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077924_134078052_134078249
ES.37680.13	chrX	-	3673	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	27	-2	27	2	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAGATTCATTTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	134078354	134068370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ES.37680.14	chrX	-	7901	4	NIC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	0	intron_retention	FALSE	canonical	3	185	junction_3	27.1088341484633	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134078351	134068372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134070935_134071511_134072097_134073399_134078052_134078249
ES.37680.15	chrX	-	4654	2	ISM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	4778	0	4778	0	intron_retention	FALSE	canonical	3	243	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134073603	134068372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_134070935_134071511
ES.37680.16	chrX	-	3724	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	99.3390154974369	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCCATGAGATTCATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	134078352	134068373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077932_134078052_134078249
ES.37680.18	chrX	-	3701	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	91.6801505234366	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCATGAGATTCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	134078351	134068374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077897_134078052_134078249
ES.37680.19	chrX	-	3731	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.324672937419	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCATGAGATTCATT	NA	False	NA	NA	False	AGTAAA	-14	NA	134078352	134068374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077924_134078052_134078249
ES.37680.2	chrX	-	3852	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	7	-161	7	161	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078374	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ES.37680.20	chrX	-	8097	3	ISM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	27	5	27	-5	intron_retention	FALSE	canonical	3	186	junction_2	28.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGTCCATGAGATTC	NA	False	NA	NA	False	AGTAAA	-11	NA	134078354	134068377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_134070935_134071511_134072097_134073399
ES.37680.22	chrX	-	3429	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	38	-295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.324672937419	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAACATTTGTGTTGA	NA	False	NA	NA	False	ACTAAA	-11	NA	134078343	134068667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077924_134078052_134078249
ES.37680.23	chrX	-	3379	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	-297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.6801505234366	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATTAACATTTGTGTT	NA	False	NA	NA	False	ACTAAA	-9	NA	134078351	134068669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134077924_134078052_134078249
ES.37680.24	chrX	-	3208	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	30	460	30	-460	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAACAGTGTGTCTATA	NA	False	NA	NA	False	AATAAA	-35	NA	134078351	134068832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ES.37680.3	chrX	-	3923	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	27	161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.324672937419	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078354	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077897_134078052_134078249
ES.37680.4	chrX	-	8250	3	ISM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	40	-161	40	161	intron_retention	FALSE	canonical	3	186	junction_2	28.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078341	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_134070935_134071511_134072097_134073399
ES.37680.5	chrX	-	3396	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	161	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	88.6097483350449	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078351	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134071664_134073399_134073700_134077932_134078052_134078249
ES.37680.6	chrX	-	3888	6	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	27	161	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	99.3390154974369	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078354	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134073700_134074196_134074253_134077932_134078052_134078249
ES.37680.7	chrX	-	4382	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	161	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	90.0069441765467	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078351	134068211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134072097_134073399_134074253_134077932_134078052_134078249
ES.37680.8	chrX	-	3712	4	NIC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	27	160	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	101.004950373732	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134078354	134068212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134070935_134071511_134072097_134073399_134073700_134078249
ES.37680.9	chrX	-	3403	5	NNC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	30	160	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	105.856919943856	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134078351	134068212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134070935_134071511_134071664_134073399_134073700_134077924_134078052_134078249
ES.37681.1	chrX	+	4077	4	NNC	ENSMUSG00000082071.2	novel	1383	3	NA	NA	-11450	2500	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGATGAAGTTCGTTCTT	NA	False	NA	NA	False	NA	NA	NA	134160151	134177463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134160336_134171591_134171892_134173093_134173673_134174449
ES.37681.2	chrX	+	3889	4	NNC	ENSMUSG00000082071.2	novel	1383	3	NA	NA	-11416	2346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAGTAATGGCTTTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	134160185	134177309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134160336_134171591_134171892_134173093_134173673_134174449
ES.37682.1	chrX	+	3842	5	NNC	ENSMUSG00000067360.13	novel	3673	5	NA	NA	0	161	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	62.9563340737054	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203064	134213562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134203188_134203385_134203505_134208081_134208382_134209685_134210271_134210847
ES.37682.10	chrX	+	6381	3	NNC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	2010	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTAAGTCCATGAGA	NA	False	NA	NA	False	AGTAAA	-8	NA	134205074	134213393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134208382_134209685_134210271_134210904
ES.37682.11	chrX	+	3756	8	NNC	ENSMUSG00000087428.2	novel	632	6	NA	NA	0	4737	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	14.0145696782065	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230509	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134230653_134232087_134232178_134233599_134233689_134235438_134235537_134238796_134238896_134249759_134250060_134250503_134251086_134252258
ES.37682.12	chrX	+	5370	6	NNC	ENSMUSG00000087428.2	novel	632	6	NA	NA	3	4737	intron_retention	FALSE	canonical	1	1	junction_3	15.816447135814	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230512	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134230653_134232087_134232178_134233599_134233689_134235438_134235537_134238796_134238896_134249759
ES.37682.13	chrX	+	4830	6	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	3	4739	intron_retention	FALSE	canonical	3	10	junction_3	13.8043471413899	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTGTTTCTTTGAAC	NA	False	NA	NA	False	AATAAA	-21	NA	134230512	134254615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503
ES.37682.14	chrX	+	3721	8	NNC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4737	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.3889994444114	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230513	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134230622_134232087_134232178_134233599_134233689_134235438_134235537_134238796_134238896_134249759_134250060_134250503_134251086_134252258
ES.37682.15	chrX	+	5273	5	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4739	intron_retention	FALSE	canonical	3	10	junction_3	13.9530462623758	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTGTTTCTTTGAAC	NA	False	NA	NA	False	AATAAA	-21	NA	134230513	134254615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759
ES.37682.16	chrX	+	3466	5	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4737	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	11.0989864402116	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230513	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134230653_134232087_134232178_134249759_134250060_134250503_134251086_134252258
ES.37682.17	chrX	+	3654	7	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	4	4737	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	13.228756555323	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230513	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503_134251086_134252258
ES.37682.18	chrX	+	5224	3	Fusion	ENSMUSG00000087428.2_ENSMUSG00000095964.2	novel	1386	3	NA	NA	16	1897	intron_retention	FALSE	canonical	2	6	junction_2	0.5	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230525	134315601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134230653_134304233_134304324_134310594
ES.37682.2	chrX	+	3678	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	20	0	11	0	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134203075	134213401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ES.37682.20	chrX	+	2859	7	NNC	ENSMUSG00000087428.2	novel	632	6	NA	NA	43	4737	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.7948940141148	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134230552	134254613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134250060_134250503_134251086_134253014
ES.37682.21	chrX	+	4039	6	NIC	ENSMUSG00000087428.2	novel	632	6	NA	NA	58	4732	intron_retention	FALSE	canonical	3	10	junction_3	13.6381816969859	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAACATTATCTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	134230567	134254608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134230653_134232087_134232178_134233599_134233689_134238796_134238896_134249759_134251086_134252258
ES.37682.22	chrX	+	3851	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	0	-174	0	7	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274032	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
ES.37682.23	chrX	+	3268	4	NIC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	2	-280	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	70.4856171301793	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAACATTTGTGTTGA	NA	False	NA	NA	False	ACTAAA	-11	NA	134274034	134283695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134274160_134278675_134278976_134280276_134280862_134281437
ES.37682.24	chrX	+	3693	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	19	-35	19	35	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTGTTTAGGTTTT	NA	False	NA	NA	False	AGTAAA	-35	NA	134274051	134284010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
ES.37682.26	chrX	+	3821	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	22	-7	22	7	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274054	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
ES.37682.27	chrX	+	3665	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	22	149	22	18	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAGATTCATTTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	134274054	134283993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
ES.37682.28	chrX	+	3768	5	NNC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	24	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.406375611586	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134274056	134284147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281494
ES.37682.29	chrX	+	3093	4	NNC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	25	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	99.5735350828165	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274057	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134274160_134274357_134274485_134280709_134280862_134281437
ES.37682.3	chrX	+	3833	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	26	-161	17	161	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203081	134213562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ES.37682.30	chrX	+	3501	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	25	151	25	-151	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATGGAGAATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	134274057	134283824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
ES.37682.31	chrX	+	3493	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	25	318	25	-151	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATGGAGAATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	134274057	134283824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
ES.37682.32	chrX	+	3720	6	NNC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	25	13	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	91.5283562618711	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCCATGAGATTCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	134274057	134283988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134274160_134274357_134274485_134278123_134278179_134278675_134278976_134280276_134280862_134281437
ES.37682.33	chrX	+	3380	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	25	272	25	-272	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTGATTACATTT	NA	False	NA	NA	False	ACTAAA	-19	NA	134274057	134283703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
ES.37682.34	chrX	+	3525	4	NIC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	25	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	103.099735962589	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134274057	134284148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134274160_134274357_134274485_134280276_134280862_134281437
ES.37682.35	chrX	+	3809	5	NNC	ENSMUSG00000094004.8	novel	3677	5	NA	NA	25	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1872422084953	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274057	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134274160_134274374_134274485_134278675_134278976_134280276_134280862_134281437
ES.37682.37	chrX	+	8009	4	NIC	ENSMUSG00000094004.8	novel	3836	5	NA	NA	33	7	intron_retention	FALSE	canonical	3	158	junction_2	42.2084772949174	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134274065	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134274160_134274357_134278976_134280276_134280862_134281437
ES.37682.38	chrX	+	5275	1	NIC	ENSMUSG00000094004.8	novel	3836	5	NA	NA	4677	9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAGTCCATGAGAT	NA	False	NA	NA	False	AGTAAA	-9	NA	134278709	134283984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134278700_134284000
ES.37682.39	chrX	+	4285	2	ISM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	5256	-7	5256	7	3prime_fragment	FALSE	canonical	3	161	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134279288	134284149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134280862_134281437
ES.37682.40	chrX	+	3477	5	NNC	ENSMUSG00000095964.2	novel	1386	3	NA	NA	-15808	1897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.76085931090146	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134294796	134315601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134294891_134304233_134304324_134310594_134310895_134311338_134311921_134313190
ES.37682.41	chrX	+	3498	5	NNC	ENSMUSG00000095964.2	novel	1386	3	NA	NA	-7965	1899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.76085931090146	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATCTGTTTCTTTGAAC	7246	False	NA	NA	False	AATAAA	-21	NA	134302639	134315603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134302753_134304233_134304324_134310594_134310895_134311338_134311921_134313190
ES.37682.42	chrX	+	3868	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	-15	-176	-15	176	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCTTCGTGAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	134334568	134344755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ES.37682.43	chrX	+	3842	5	FSM	ENSMUSG00000096508.8	ENSMUST00000179953.2	3519	5	2	-325	2	175	multi-exon	FALSE	canonical	3	42	junction_2	73.4825659595526	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTTCTTCGTGAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	134334585	134344754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134334711_134334908_134335028_134339279_134339580_134340880_134341466_134342041
ES.37682.45	chrX	+	3674	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	21	-18	21	18	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAGATTCATTTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	134334604	134344597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ES.37682.46	chrX	+	4970	4	NIC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	21	13	intron_retention	FALSE	canonical	3	153	junction_2	43.4920171474669	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCCATGAGATTCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	134334604	134344592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134334711_134334908_134335036_134339279_134341466_134342041
ES.37682.49	chrX	+	3663	5	FSM	ENSMUSG00000096508.8	ENSMUST00000179953.2	3519	5	22	-166	22	16	multi-exon	FALSE	canonical	3	42	junction_2	73.4825659595526	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134334605	134344595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134334711_134334908_134335028_134339279_134339580_134340880_134341466_134342041
ES.37682.5	chrX	+	5133	4	NIC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	21	161	intron_retention	FALSE	canonical	3	77	junction_3	47.6934656600531	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203085	134213562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134203188_134203385_134203513_134208081_134210271_134210847
ES.37682.50	chrX	+	10146	1	Genic_Genomic	ENSMUSG00000096508.8	novel	NA	NA	NA	NA	23	173	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134334606	134344752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_134334600_134344800
ES.37682.51	chrX	+	3784	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	24	31	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	65.1627769512626	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATATTTTTGTTTAGG	NA	False	NA	NA	False	AGTAAA	-31	NA	134334607	134344610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334811_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ES.37682.52	chrX	+	3708	6	NNC	ENSMUSG00000096508.8	novel	3519	5	NA	NA	24	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	92.7499865229101	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTAAGTCCATGAGA	NA	False	NA	NA	False	AGTAAA	-8	NA	134334607	134344587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335028_134338727_134338783_134339279_134339580_134340880_134341466_134342041
ES.37682.53	chrX	+	9569	2	NIC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	174	intron_retention	FALSE	canonical	3	161	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134341466_134342041
ES.37682.54	chrX	+	9367	3	NIC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	170	intron_retention	FALSE	canonical	3	161	junction_2	44	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTATTGGTTCTTCGT	NA	False	NA	NA	False	ATTAAA	-13	NA	134334608	134344749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134334711_134334908_134341466_134342041
ES.37682.55	chrX	+	3658	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.6392073815917	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAAGTCCATGAGAT	NA	False	NA	NA	False	AGTAAA	-9	NA	134334608	134344588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335040_134339286_134339580_134340880_134341466_134342041
ES.37682.56	chrX	+	3699	4	NIC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	174	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	69.8108555710038	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134334711_134339279_134339580_134340880_134341466_134342041
ES.37682.57	chrX	+	3671	5	Fusion	ENSMUSG00000054994.3_ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	-5	multi-exon	FALSE	canonical	3	70	junction_2	76.9492527579053	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGTCCATGAGATTC	NA	False	NA	NA	False	AGTAAA	-11	NA	134334608	134405338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134334711_134334908_134335036_134400016_134400317_134401619_134402205_134402781
ES.37682.58	chrX	+	3853	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.6392073815917	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335063_134339279_134339580_134340880_134341466_134342041
ES.37682.59	chrX	+	3881	6	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	174	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	91.2841716838138	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335036_134338727_134338783_134339279_134339580_134340880_134341466_134342041
ES.37682.6	chrX	+	3837	5	Fusion	ENSMUSG00000067360.13_ENSMUSG00000054994.3	novel	3698	5	NA	NA	21	161	multi-exon	FALSE	canonical	3	70	junction_2	66.7696600260927	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203085	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134203188_134334908_134335036_134400016_134400317_134401619_134402205_134402781
ES.37682.60	chrX	+	3761	5	NNC	ENSMUSG00000096508.8	novel	3519	5	NA	NA	25	174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.5461429273347	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335028_134339279_134339580_134340880_134341466_134342098
ES.37682.61	chrX	+	3391	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	172	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	86.0464990571958	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134334608	134344751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335036_134339279_134339580_134341313_134341466_134342041
ES.37682.62	chrX	+	3615	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	89.6392073815917	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAGATTCATTTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	134334608	134344597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335036_134339334_134339580_134340880_134341466_134342041
ES.37682.63	chrX	+	3601	5	NNC	ENSMUSG00000096508.8	novel	3677	5	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	65.1627769512626	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATGGAGAATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	134334608	134344428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334811_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ES.37682.64	chrX	+	3873	6	NNC	ENSMUSG00000096508.8	novel	3519	5	NA	NA	25	174	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	92.7499865229101	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335028_134338727_134338783_134339279_134339580_134340880_134341466_134342041
ES.37682.65	chrX	+	5671	4	NNC	ENSMUSG00000096508.8	novel	3519	5	NA	NA	25	174	intron_retention	FALSE	canonical	2	3	junction_2	101.775351742071	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334608	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335028_134338727_134341466_134342041
ES.37682.66	chrX	+	3901	6	NNC	ENSMUSG00000096508.8	novel	3519	5	NA	NA	25	173	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	93.2471983493338	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134334608	134344752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134334711_134334908_134335028_134338698_134338783_134339279_134339580_134340880_134341466_134342041
ES.37682.67	chrX	+	3496	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	26	155	26	-5	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAGAATGGAGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	134334609	134344424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ES.37682.68	chrX	+	3222	5	Fusion	ENSMUSG00000054994.3_ENSMUSG00000096508.8	novel	3677	5	NA	NA	45	-1	multi-exon	FALSE	canonical	2	10	junction_3	105.661014570181	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCCATGAGATTCATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	134334628	134405342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134334711_134334908_134335036_134400016_134400317_134402052_134402205_134402781
ES.37682.69	chrX	+	4985	3	Fusion	ENSMUSG00000054994.3_ENSMUSG00000096508.8	novel	3677	5	NA	NA	378	161	intron_retention	FALSE	canonical	3	70	junction_1	87.5	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134334961	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134335036_134400016_134402205_134402781
ES.37682.7	chrX	+	3659	5	NNC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_2	62.9563340737054	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCCATGAGATTCATTT	NA	False	NA	NA	False	AGTAAA	-15	NA	134203085	134213400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134203188_134203385_134203505_134208081_134208382_134209685_134210271_134210847
ES.37682.70	chrX	+	4342	3	ISM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	3951	-174	3951	174	3prime_fragment	FALSE	canonical	3	155	junction_1	3	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134338534	134344753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134339580_134340880_134341466_134342041
ES.37682.71	chrX	+	2238	5	NNC	ENSMUSG00000094371.2	novel	1386	3	NA	NA	-7932	1898	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.29128784747792	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCTGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134363271	134376177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134363383_134364832_134364923_134371193_134371494_134372438_134372520_134374521
ES.37682.72	chrX	+	3855	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	5	-162	5	162	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTTCTTCGTGAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	134395341	134405505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
ES.37682.73	chrX	+	3742	6	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	97.7785252496682	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAGTCCATGAGATTC	NA	False	NA	NA	False	AGTAAA	-11	NA	134395343	134405338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395469_134395666_134395786_134399463_134399520_134400016_134400317_134401619_134402205_134402781
ES.37682.74	chrX	+	3398	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	13	287	13	-287	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTGATTACATTT	NA	False	NA	NA	False	ACTAAA	-19	NA	134395349	134405056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
ES.37682.75	chrX	+	3685	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	16	-3	16	3	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAGATTCATTTAATA	NA	False	NA	NA	False	AGTAAA	-19	NA	134395352	134405346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
ES.37682.76	chrX	+	3940	5	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	17	159	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	85.0628444151734	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134395353	134405502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395569_134395666_134395786_134400016_134400317_134401619_134402205_134402781
ES.37682.77	chrX	+	5568	3	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	26	159	intron_retention	FALSE	canonical	0	0	junction_1	122.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134395362	134405502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395469_134399463_134402205_134402781
ES.37682.78	chrX	+	3399	5	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	27	161	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	89.2226848957147	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395363	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395469_134395666_134395786_134400016_134400317_134402052_134402205_134402781
ES.37682.79	chrX	+	3605	5	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.805195798629	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134395366	134405343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395469_134399463_134399520_134400016_134400317_134401619_134402205_134402781
ES.37682.8	chrX	+	9613	3	NNC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	21	161	intron_retention	FALSE	non_canonical	0	0	junction_1	38.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134203085	134213562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134204288_134204574_134210271_134210847
ES.37682.80	chrX	+	5132	4	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	161	intron_retention	FALSE	canonical	3	112	junction_2	54.9201440477192	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395366	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134395469_134395666_134395786_134400016_134402205_134402781
ES.37682.81	chrX	+	3709	4	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	160	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	96.7551319339473	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGGTTCTTCGTGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	134395366	134405503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134395469_134400016_134400317_134401619_134402205_134402781
ES.37682.82	chrX	+	3546	4	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	96.7551319339473	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCCATGAGATTCAT	NA	False	NA	NA	False	AGTAAA	-13	NA	134395366	134405340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134395469_134400016_134400317_134401619_134402205_134402781
ES.37682.83	chrX	+	3678	5	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	92.0787706260243	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAGATTCATTTAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	134395366	134405345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134395469_134395666_134395794_134400016_134400317_134401619_134402205_134402781
ES.37682.84	chrX	+	6540	2	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	3051	161	intron_retention	FALSE	canonical	3	245	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134398387	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134402205_134402781
ES.37682.85	chrX	+	6090	2	NIC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	3334	-6	intron_retention	FALSE	canonical	3	245	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAAGTCCATGAGATT	NA	False	NA	NA	False	AGTAAA	-10	NA	134398670	134405337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134402205_134402781
ES.37682.86	chrX	+	3900	3	ISM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	4388	-161	4388	161	3prime_fragment	FALSE	canonical	3	127	junction_1	59	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134399724	134405504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134400317_134401619_134402205_134402781
ES.37682.9	chrX	+	4396	4	NNC	ENSMUSG00000067360.13	novel	3698	5	NA	NA	21	159	intron_retention	FALSE	canonical	3	44	junction_2	66.2168155883886	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGGTTCTTCGTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	134203085	134213560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134203188_134203385_134203505_134208081_134208382_134209685
ES.37683.1	chrX	+	1526	8	NIC	ENSMUSG00000086685.2	novel	636	6	NA	NA	2	2518	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	10.2399776785471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGGGATGACTTTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	134420341	134452583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948_134450249_134450691_134451274_134452456
ES.37683.2	chrX	+	2060	7	NIC	ENSMUSG00000086685.2	novel	636	6	NA	NA	3	2610	intron_retention	FALSE	canonical	3	6	junction_4	11.060440015358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCAATCTCTGCTC	NA	False	NA	NA	False	GATAAA	-16	NA	134420342	134452675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948_134451274_134452456
ES.37683.3	chrX	+	666	6	FSM	ENSMUSG00000086685.2	ENSMUST00000135491.2	636	6	31	-61	31	61	multi-exon	FALSE	canonical	3	6	junction_4	12.0266371026983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCCCTTTTACTG	NA	False	NA	NA	False	AATACA	-16	NA	134420370	134450126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948
ES.37683.4	chrX	+	3711	8	NIC	ENSMUSG00000086685.2	novel	636	6	NA	NA	59	4760	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	10.2399776785471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTATCCGTTTCTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	134420398	134454825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948_134450249_134450691_134451274_134452456
ES.37684.1	chrX	-	1707	9	ISM	ENSMUSG00000058252.7	ENSMUST00000078605.7	1776	10	499	6	499	-6	3prime_fragment	FALSE	canonical	1	3	junction_3	2.99739470207045	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATCAGTGTCTTTT	7470	False	NA	NA	False	AATAAA	-14	NA	134594040	134555452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_134555875_134558185_134558350_134559471_134559654_134559749_134559968_134561192_134561330_134565131_134565353_134566154_134566276_134570064_134570177_134593910
ES.37684.2	chrX	-	1443	8	NIC	ENSMUSG00000058252.7	novel	1776	10	NA	NA	-18	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	3.37457480314792	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAAAACATCAGTGTCT	6953	False	NA	NA	False	AATAAA	-11	NA	134594557	134555455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134555875_134558185_134558350_134559471_134559654_134559749_134559968_134561192_134561330_134570064_134570177_134593910_134594046_134594481
ES.37685.1	chrX	+	1040	8	NNC	ENSMUSG00000084330.2	novel	434	5	NA	NA	-2301	5369	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2.43276948084663	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTGAGTTGCACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134625445	134635592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134625674_134627458_134627605_134628012_134628123_134628783_134628921_134629024_134629068_134629492_134629566_134635168_134635227_134635347
ES.37685.10	chrX	+	2455	8	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-54	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.3318827298926	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAATCTGTACTGTAC	NA	False	NA	NA	False	ATTAAA	-18	NA	134643427	134681532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643474_134643576_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134651284_134651336_134652693_134652767_134679654
ES.37685.100	chrX	+	4268	6	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_3	46.9680742632695	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739805	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.101	chrX	+	3808	6	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	1	-163	intron_retention	FALSE	canonical	0	0	junction_1	63.2348005452694	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTTGCTATTTGTCT	NA	False	NA	NA	False	AATGAA	-17	NA	134739805	134745312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326
ES.37685.102	chrX	+	3949	6	NNC	ENSMUSG00000072966.12	novel	3736	7	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_1	64.49496104348	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739807	134745475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740531_134740609_134741141_134741272_134741367_134741674_134741969_134742053_134742326
ES.37685.103	chrX	+	3976	6	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_1	59.0369375899529	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739807	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740531_134740622_134741141_134741287_134741367_134741674_134741969_134742053_134742326
ES.37685.104	chrX	+	3798	7	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	9	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.957342712673	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739813	134745475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740493_134740622_134741141_134741234_134741367_134741440_134741601_134741678_134741969_134742053_134742326
ES.37685.105	chrX	+	3943	6	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_1	63.2348005452694	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739814	134745475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740550_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326
ES.37685.106	chrX	+	3720	7	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6669207311169	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739814	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740550_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.107	chrX	+	4777	5	FSM	ENSMUSG00000072966.12	ENSMUST00000137392.8	776	5	-910	-3091	12	-1	multi-exon	FALSE	canonical	3	20	junction_2	50.2959988468268	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739816	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.108	chrX	+	3768	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	15	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	56.5705066463278	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCATAAATGACCCTTC	NA	False	NA	NA	False	AATAAA	-14	NA	134739819	134745469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134740012_134740531_134740622_134741141_134741258_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.109	chrX	+	5898	11	Fusion	ENSMUSG00000072966.12_ENSMUSG00000072964.15	novel	776	5	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_7	84.7823094755032	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134739841	134791830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326_134742386_134746603_134746703_134749426_134749489_134786097_134787676_134788009_134788067_134789120_134789229_134789499
ES.37685.11	chrX	+	5721	10	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-53	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.3493952591675	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGCCCCTTCACTGT	NA	False	NA	13	True	AATAAA	-20	NA	134643428	134704218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.110	chrX	+	3751	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	60	3	3	1	multi-exon	FALSE	canonical	0	0	junction_1	54.6669207311169	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGACCCTTCTTCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	134739842	134745476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.111	chrX	+	3914	6	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	59.0369375899529	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739851	134745475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740550_134740622_134741141_134741287_134741367_134741674_134741969_134742053_134742326
ES.37685.112	chrX	+	3952	7	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	61.5613966342184	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739854	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740264_134740296_134740531_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326
ES.37685.113	chrX	+	4330	12	Fusion	ENSMUSG00000072966.12_ENSMUSG00000072964.15	novel	880	7	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_1	87.9858177903201	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTGTATATG	NA	False	NA	9	True	AATAAA	-20	NA	134739861	134791829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326_134742476_134746603_134746703_134786097_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ES.37685.114	chrX	+	3854	7	NNC	ENSMUSG00000072966.12	novel	3736	7	NA	NA	132	2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	52.2228132354264	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACCCTTCTTCACTTT	NA	False	NA	NA	False	AATAAA	-22	NA	134739986	134745477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740296_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.115	chrX	+	3381	4	NIC	ENSMUSG00000072966.12	novel	776	5	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	38.8529993122224	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134741140	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134741219_134741601_134741674_134741969_134742053_134742326
ES.37685.116	chrX	+	3150	1	NIC	ENSMUSG00000072964.15	novel	4430	11	NA	NA	43982	-42745	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134742324	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134742300_134745500
ES.37685.117	chrX	+	2601	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	3	208	1	6	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGATTTCTATCTTA	NA	False	NA	NA	False	AATAAA	-24	NA	134786602	134791619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ES.37685.118	chrX	+	3840	4	NIC	ENSMUSG00000072964.15	novel	2823	5	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_1	90.5698011971368	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134786628	134791830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134786837_134787593_134787676_134788009_134789229_134789499
ES.37685.119	chrX	+	2910	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	82	-180	-50	177	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTACAATATATTCAT	NA	False	NA	NA	False	AATACA	-20	NA	134786681	134792007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ES.37685.12	chrX	+	4300	2	FSM	ENSMUSG00000072969.3_ENSMUSG00000106264.3	ENSMUST00000128847.2	2329	2	-55	-1916	-53	0	multi-exon	FALSE	canonical	3	91	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643428	134648071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134645325_134645667
ES.37685.120	chrX	+	2709	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	113	1	-17	-1	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTGTATATG	NA	False	NA	9	True	AATAAA	-20	NA	134786714	134791829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ES.37685.122	chrX	+	3510	11	NNC	ENSMUSG00000072964.15	novel	2812	5	NA	NA	10	92561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.1902087692845	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAATCTATGGTGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	134786741	134884391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134838702_134838808_134839103_134839312_134866555_134866916_134868675_134868841_134871327_134871678_134880871_134881589_134883128
ES.37685.123	chrX	+	3688	3	ISM	ENSMUSG00000072964.15	ENSMUST00000207433.2	4430	11	88411	-216	22	-1	intron_retention	FALSE	canonical	3	179	junction_1	23.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTGTATATG	NA	False	NA	9	True	AATAAA	-20	NA	134786753	134791829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134787676_134788009_134788067_134789120
ES.37685.124	chrX	+	3478	4	NIC	ENSMUSG00000072964.15	novel	2812	5	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_1	90.5698011971368	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTTATTGATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	134786773	134791613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134786837_134787593_134787676_134788009_134789229_134789499
ES.37685.13	chrX	+	2700	6	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-43	-4108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	40.2770406062809	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATATTGTTTTTATAG	NA	False	NA	NA	False	AATAAA	-18	NA	134643438	134677427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134675345
ES.37685.14	chrX	+	5302	6	NIC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	-40	4396	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.9549365401433	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCCCGTGTCTTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	134643441	134667135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.15	chrX	+	5710	10	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	55.3493952591675	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134643444	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698848_134699073_134699223_134699496
ES.37685.16	chrX	+	2822	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-37	-6	-37	6	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCAGTTCTTTAGT	NA	False	NA	NA	False	AATAAA	-25	NA	134643444	134648077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
ES.37685.17	chrX	+	1222	5	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-34	403	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	13.3299474867683	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTGACTCTTACAATC	NA	False	NA	NA	False	NA	NA	NA	134643447	134663142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.18	chrX	+	5635	10	FSM	ENSMUSG00000043384.16	ENSMUST00000113147.8	5611	10	-34	10	-34	-2	multi-exon	TRUE	canonical	3	21	junction_5	46.6923209907815	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGAAATTGCCCCTTC	NA	False	NA	8	True	AATAAA	-15	NA	134643447	134704213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.19	chrX	+	3697	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-34	0	intron_retention	FALSE	canonical	3	91	junction_2	9	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643447	134648071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644311_134645325_134645667
ES.37685.2	chrX	+	3465	11	Fusion	ENSMUSG00000043384.16_ENSMUSG00000084330.2	novel	5611	10	NA	NA	-2301	-14666	multi-exon	FALSE	canonical	0	0	junction_3	45.943878808825	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGTTCCAGTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	134625445	134648073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134625674_134628012_134628123_134628783_134628925_134629024_134629068_134629492_134629566_134635135_134635227_134640569_134640663_134643576_134643728_134644311_134644364_134645247_134645325_134645667
ES.37685.20	chrX	+	2691	6	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-26	24	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	39.091687095852	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGCCAACCACAGTT	NA	False	NA	NA	False	TTTAAA	-41	NA	134643455	134662763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134651336_134652693_134652767_134662477
ES.37685.21	chrX	+	6171	14	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	58.2014457210787	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643456	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477_134662597_134663928_134664054_134696938_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.22	chrX	+	1162	6	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-25	-5622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.2770406062809	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATACAAAGCATTCGT	NA	False	NA	NA	False	NA	NA	NA	134643456	134675913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134675351
ES.37685.23	chrX	+	4924	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	-24	-4063	-24	4063	multi-exon	FALSE	canonical	3	40	junction_5	28.5629130167075	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTAGTCTTGCCACGGT	NA	False	NA	NA	False	AGTAAA	-25	NA	134643457	134666802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.24	chrX	+	5930	10	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_5	55.5866579604304	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134643459	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134696938_134697086_134698301_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.25	chrX	+	5302	7	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-22	4392	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	42.1521714215953	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGAGTGCCCGTGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	134643459	134667131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134651284_134651336_134652693_134652767_134662477
ES.37685.26	chrX	+	5742	11	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	57.1895095275349	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	NA	False	NA	9	True	AATAAA	-16	NA	134643459	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.27	chrX	+	7046	9	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-21	1	intron_retention	FALSE	non_canonical	0	0	junction_7	61.9591599362031	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643460	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.28	chrX	+	5252	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	-21	-4394	-21	4394	multi-exon	FALSE	canonical	3	40	junction_5	28.5629130167075	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGCCCGTGTCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	134643460	134667133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.29	chrX	+	6065	11	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-21	-1	intron_retention	FALSE	canonical	0	0	junction_6	51.8502651873643	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	NA	False	NA	9	True	AATAAA	-16	NA	134643460	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697697_134697787_134698301_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.3	chrX	+	3139	6	NNC	ENSMUSG00000084330.2	novel	434	5	NA	NA	-2263	5362	intron_retention	FALSE	canonical	2	5	junction_1	2.82842712474619	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTTGTGTCCTGAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	134625483	134635585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134628123_134628832_134628921_134629024_134629068_134629492_134629566_134635168_134635227_134635347
ES.37685.30	chrX	+	5672	11	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	58.9905924703253	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134643463	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134651284_134651336_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.31	chrX	+	5954	11	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.8131256498103	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643463	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.32	chrX	+	5292	6	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-18	4394	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	30.4801574799081	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGCCCGTGTCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	134643463	134667133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134645667_134645763_134649404_134649532_134652693_134652767_134662477
ES.37685.33	chrX	+	2743	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	31	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643465	134648071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134645247_134645325_134645667
ES.37685.34	chrX	+	5567	9	NIC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	55.1247165525592	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643466	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.35	chrX	+	5882	11	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.361288539579	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643473	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.36	chrX	+	5935	11	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.206290526383	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATTGCCCCTTCACTG	NA	False	NA	12	True	AATAAA	-19	NA	134643475	134704217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477_134662597_134696890_134697086_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.37	chrX	+	2718	7	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	-2	4384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.0613539783685	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAACAGATTGAGTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	134643479	134667123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477_134662597_134665101
ES.37685.38	chrX	+	5890	11	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	56.35033274081	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643481	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697697_134697787_134698301_134698413_134698516_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.39	chrX	+	2813	4	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	1	6	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.6789449880446	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCAGTTCTTTAGT	NA	False	NA	NA	False	AATAAA	-25	NA	134643482	134648077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134645667
ES.37685.4	chrX	+	3650	13	Fusion	ENSMUSG00000043384.16_ENSMUSG00000084330.2	novel	5640	10	NA	NA	-2233	-14668	multi-exon	FALSE	non_canonical	0	0	junction_4	24.2378262685048	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134625513	134648071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134625674_134627458_134627605_134628012_134628123_134628783_134628925_134629024_134629068_134629492_134629566_134635168_134635227_134640569_134640663_134643576_134643728_134644190_134644272_134644440_134644554_134645247_134645325_134645667
ES.37685.40	chrX	+	894	6	NIC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	1	29	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.9549365401433	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAACCACAGTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	134643482	134662768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.41	chrX	+	5176	5	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	1	4392	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	13.3299474867683	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGAGTGCCCGTGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	134643482	134667131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ES.37685.42	chrX	+	5795	10	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.3903180370606	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134643483	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697085_134698301_134698431_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.43	chrX	+	5289	7	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	2	4386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.8241435233543	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	134643485	134667125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134651950_134652021_134652693_134652767_134662477
ES.37685.44	chrX	+	5956	12	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	62.0459706938238	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643485	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134696890_134697086_134697697_134697830_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.45	chrX	+	5922	12	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.395160779031	414	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643488	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134696940_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.46	chrX	+	4780	4	NNC	ENSMUSG00000043384.16	novel	837	6	NA	NA	5	4291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7706306736817	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134643488	134667030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643527_134649415_134649532_134652693_134652767_134662477
ES.37685.47	chrX	+	5652	10	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.088400751619	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGAAATTGCCCCTTC	NA	False	NA	8	True	AATAAA	-15	NA	134643488	134704213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652779_134698255_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.48	chrX	+	5607	9	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	60.4643490000513	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	NA	False	NA	11	True	AATAAA	-18	NA	134643488	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.49	chrX	+	6115	13	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	58.5346526047226	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	NA	False	NA	9	True	AATAAA	-16	NA	134643506	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477_134662597_134663928_134664054_134696890_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.5	chrX	+	3925	6	NNC	ENSMUSG00000084330.2	novel	434	5	NA	NA	-2229	5364	intron_retention	FALSE	canonical	0	0	junction_1	4.93963561409139	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGTGTCCTGAGTTGC	NA	False	NA	NA	False	AATAAA	-11	NA	134625517	134635587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134628925_134629024_134629068_134629492_134629566_134630126_134630231_134635168_134635227_134635347
ES.37685.50	chrX	+	6499	2	ISM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	7440	-4392	7438	4392	3prime_fragment	FALSE	canonical	3	40	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTGAGTGCCCGTGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	134650921	134667131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134652767_134662477
ES.37685.51	chrX	+	4410	1	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	7909	-6937	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAAAAAGTATAA	NA	False	NA	NA	False	NA	NA	NA	134651392	134655802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134651400_134655800
ES.37685.52	chrX	+	3160	1	Intergenic	novelGene_30888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATCTTTGCTGAGCTCA	NA	False	NA	NA	False	NA	NA	NA	134663299	134666459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_134663300_134666500
ES.37685.53	chrX	+	4163	1	Intergenic	novelGene_30889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATATTGTTTTTATAG	NA	False	NA	NA	False	AATAAA	-18	NA	134673264	134677427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_134673300_134677400
ES.37685.54	chrX	+	178	1	Intergenic	novelGene_30890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGATTGGTAAAA	1515	False	NA	NA	False	NA	NA	NA	134682995	134683173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_134683000_134683200
ES.37685.55	chrX	+	5387	7	ISM	ENSMUSG00000043384.16	ENSMUST00000113144.8	5843	11	53335	7	-1520	1	3prime_fragment	FALSE	canonical	0	0	junction_1	59.1326193117358	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9718	False	NA	11	True	AATAAA	-18	NA	134696816	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.56	chrX	+	5394	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1490	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1326193117358	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9748	False	NA	10	True	AATAAA	-17	NA	134696846	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.57	chrX	+	5424	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1468	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5454935957405	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9770	False	NA	11	True	AATAAA	-18	NA	134696868	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698720_134698844_134699139_134699223_134699496
ES.37685.58	chrX	+	5308	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1468	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.9975999615988	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9770	False	NA	11	True	AATAAA	-18	NA	134696868	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.59	chrX	+	5396	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1467	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.2878456553208	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9771	False	NA	11	True	AATAAA	-18	NA	134696869	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.6	chrX	+	3150	6	NNC	ENSMUSG00000084330.2	novel	434	5	NA	NA	-2221	5362	intron_retention	FALSE	canonical	0	0	junction_2	4.53431361950185	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTTGTGTCCTGAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	134625525	134635585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134628123_134628783_134628925_134629024_134629068_134629492_134629566_134635168_134635227_134635347
ES.37685.60	chrX	+	5531	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1467	2	intron_retention	FALSE	canonical	0	0	junction_1	64.4627023944854	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATTGCCCCTTCACTG	9771	False	NA	12	True	AATAAA	-19	NA	134696869	134704217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698844_134699139_134699223_134699496
ES.37685.61	chrX	+	5245	6	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1467	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	60.7302231183124	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9771	False	NA	11	True	AATAAA	-18	NA	134696869	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.62	chrX	+	5401	5	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1466	0	intron_retention	FALSE	canonical	0	0	junction_1	67.8652156852095	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9772	False	NA	10	True	AATAAA	-17	NA	134696870	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134698301_134698379_134698536_134698844_134699139_134699223_134699496
ES.37685.63	chrX	+	5302	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1458	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.9805238202528	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9780	False	NA	9	True	AATAAA	-16	NA	134696878	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134698301_134698379_134698536_134698682_134698771_134698844_134699139_134699223_134699496
ES.37685.64	chrX	+	5373	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1457	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.4055723076321	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9781	False	NA	9	True	AATAAA	-16	NA	134696879	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698485_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.65	chrX	+	5640	5	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1457	1	intron_retention	FALSE	canonical	0	0	junction_1	65.5476925604555	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9781	False	NA	11	True	AATAAA	-18	NA	134696879	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134697697_134697787_134698301_134698844_134699139_134699223_134699496
ES.37685.66	chrX	+	5422	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1457	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.2878456553208	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9781	False	NA	9	True	AATAAA	-16	NA	134696879	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.67	chrX	+	5432	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1455	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2007583459647	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCCCCTTCACTGTAA	9783	False	NA	15	True	AATAAA	-22	NA	134696881	134704220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698447_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.68	chrX	+	6446	5	FSM	ENSMUSG00000043384.16	ENSMUST00000166554.2	4993	5	-1455	2	-1455	-2	multi-exon	FALSE	canonical	3	120	junction_2	19.765816451642	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGAAATTGCCCCTTC	9783	False	NA	8	True	AATAAA	-15	NA	134696881	134704213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.69	chrX	+	5472	6	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1448	0	intron_retention	FALSE	canonical	0	0	junction_1	64.4627023944854	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9790	False	NA	10	True	AATAAA	-17	NA	134696888	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698844_134699139_134699223_134699496
ES.37685.7	chrX	+	2900	2	Intergenic	novelGene_30886	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGAGTTGCACTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	134632573	134635594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_134635227_134635347
ES.37685.71	chrX	+	5250	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1447	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.3477473381739	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9791	False	NA	11	True	AATAAA	-18	NA	134696889	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697723_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.72	chrX	+	5318	6	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	-152	intron_retention	FALSE	canonical	0	0	junction_1	64.4627023944854	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACTTGTTGATGACGC	9792	False	NA	NA	False	AATGAA	-18	NA	134696890	134704063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698844_134699139_134699223_134699496
ES.37685.73	chrX	+	3774	8	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.3254191429636	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9792	False	NA	10	True	AATAAA	-17	NA	134696890	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496_134702387_134703962
ES.37685.75	chrX	+	6755	3	NIC	ENSMUSG00000043384.16	novel	4993	5	NA	NA	-1446	0	intron_retention	FALSE	canonical	3	133	junction_1	18.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9792	False	NA	10	True	AATAAA	-17	NA	134696890	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134698844_134699139_134699223_134699496
ES.37685.76	chrX	+	5350	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5454935957405	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9792	False	NA	9	True	AATAAA	-16	NA	134696890	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698653_134698771_134698844_134699139_134699223_134699496
ES.37685.77	chrX	+	6865	3	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1446	-6	intron_retention	FALSE	canonical	3	120	junction_1	6.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAGCAGAAATTGCCC	9792	False	NA	4	True	AATAAA	-11	NA	134696890	134704209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134698614_134698771_134698844_134699139
ES.37685.78	chrX	+	5379	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1445	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2007583459647	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9793	False	NA	10	True	AATAAA	-17	NA	134696891	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698447_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.79	chrX	+	5375	5	NIC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1444	-4	intron_retention	FALSE	canonical	0	0	junction_1	63.7509803846184	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCAGAAATTGCCCCT	9794	False	NA	6	True	AATAAA	-13	NA	134696892	134704211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134697086_134698301_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.8	chrX	+	2928	8	NNC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	-56	4386	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	22.8374915524486	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	134643425	134667125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477_134662597_134663928_134664054_134665101
ES.37685.80	chrX	+	5925	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1443	0	intron_retention	TRUE	canonical	0	0	junction_4	63.511888650866	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9795	False	NA	10	True	AATAAA	-17	NA	134696893	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697787_134698301_134698379_134698536_134698614_134698771_134698848_134699139_134699223_134699496
ES.37685.82	chrX	+	5701	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1443	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.3477473381739	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9795	False	NA	9	True	AATAAA	-16	NA	134696893	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134697908_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.83	chrX	+	5981	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1441	0	intron_retention	FALSE	non_canonical	0	0	junction_4	63.511888650866	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9797	False	NA	10	True	AATAAA	-17	NA	134696895	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697787_134698301_134698379_134698536_134698614_134698771_134698899_134699132_134699223_134699496
ES.37685.84	chrX	+	5374	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1438	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.2878456553208	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9800	False	NA	10	True	AATAAA	-17	NA	134696898	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698379_134698536_134698614_134698771_134698848_134699073_134699223_134699496
ES.37685.85	chrX	+	5410	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1438	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.2878456553208	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGAAATTGCCCCTTC	9800	False	NA	8	True	AATAAA	-15	NA	134696898	134704213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697659_134697787_134698301_134698379_134698536_134698614_134698771_134698848_134699073_134699223_134699496
ES.37685.86	chrX	+	5273	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1427	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.7598756358432	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAATTGCCCCTTCACT	9811	False	NA	11	True	AATAAA	-18	NA	134696909	134704216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134698301_134698447_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.87	chrX	+	5382	5	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1427	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	82.1096827420494	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAATTGCCCCTTCA	9811	False	NA	9	True	AATAAA	-16	NA	134696909	134704214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134698301_134698379_134698536_134698848_134699122_134699223_134699496
ES.37685.88	chrX	+	5245	6	NNC	ENSMUSG00000043384.16	novel	4993	5	NA	NA	-1408	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.7302231183124	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9830	False	NA	10	True	AATAAA	-17	NA	134696928	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697096_134698251_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ES.37685.89	chrX	+	5255	6	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1408	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.9975999615988	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9830	False	NA	10	True	AATAAA	-17	NA	134696928	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134698301_134698379_134698536_134698614_134698771_134698848_134699073_134699223_134699496
ES.37685.9	chrX	+	4061	2	ISM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	-55	0	-55	0	intron_retention	FALSE	canonical	3	109	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643426	134648071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_134643728_134644311
ES.37685.90	chrX	+	5373	7	NNC	ENSMUSG00000043384.16	novel	5843	11	NA	NA	-1408	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.4423308842588	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	9830	False	NA	10	True	AATAAA	-17	NA	134696928	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134697086_134697697_134697787_134698301_134698418_134698536_134698614_134698771_134698848_134699083_134699223_134699496
ES.37685.91	chrX	+	6211	3	NNC	ENSMUSG00000043384.16	novel	4993	5	NA	NA	-840	0	intron_retention	FALSE	non_canonical	0	0	junction_1	85	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134697496	134704215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134698899_134699132_134699223_134699496
ES.37685.92	chrX	+	5748	5	NNC	ENSMUSG00000043384.16	novel	5611	10	NA	NA	-677	0	intron_retention	FALSE	non_canonical	0	0	junction_3	67.2458177138177	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCCCTTCACTGTAAAAT	NA	False	NA	18	True	AATAAA	-25	NA	134697659	134704223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134698379_134698536_134698614_134698771_134698848_134699073_134699223_134699496
ES.37685.93	chrX	+	3536	6	Fusion	ENSMUSG00000043384.16_ENSMUSG00000072966.12	novel	776	5	NA	NA	-36	0	multi-exon	TRUE	canonical	3	49	junction_2	45.7619929635937	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134698300	134745475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_134698379_134698536_134698614_134741141_134741219_134741601_134741674_134741969_134742053_134742326
ES.37685.94	chrX	+	1172	1	Intergenic	novelGene_30891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	134707724	134708896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_134707700_134708900
ES.37685.97	chrX	+	3802	7	NIC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	-25	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.6669207311169	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCTTCTTCACTTTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	134739757	134745480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ES.37685.98	chrX	+	4034	6	NNC	ENSMUSG00000072966.12	novel	3814	7	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_1	63.2348005452694	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739779	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326
ES.37685.99	chrX	+	3971	6	NNC	ENSMUSG00000072966.12	novel	3736	7	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	63.2348005452694	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATGACCCTTCTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	134739804	134745474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741678_134741913_134742053_134742326
ES.37686.2	chrX	-	497	5	FSM	ENSMUSG00000060726.11	ENSMUST00000113154.8	544	5	39	8	39	-8	multi-exon	FALSE	canonical	3	7	junction_4	4.9180788932265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGGTTTTGGGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	134625971	134619423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134619503_134620414_134620520_134621315_134621402_134624106_134624186_134625823
ES.37687.1	chrX	-	179	1	Intergenic	novelGene_30887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	134636827	134636648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_134636600_134636800
ES.37688.1	chrX	-	2840	2	Antisense	novelGene_ENSMUSG00000043384.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGGGAAATTGATAGC	NA	False	NA	NA	False	NA	NA	NA	134663423	134650872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_134652765_134662475
ES.37688.2	chrX	-	5329	1	Antisense	novelGene_ENSMUSG00000043384.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134663422	134658093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_134658100_134663400
ES.37688.3	chrX	-	4972	2	Antisense	novelGene_ENSMUSG00000043384.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAAAACTTACTATAA	NA	False	NA	NA	False	AAGAAA	-8	NA	134670819	134662201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_134665265_134668910
ES.37689.1	chrX	-	210	1	Intergenic	novelGene_30892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCATGGTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	134778908	134778698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_134778700_134778900
ES.3769.1	chr10	+	176	1	Intergenic	novelGene_2862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATGATTTGGG	NA	False	NA	NA	False	NA	NA	NA	115761374	115761550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115761400_115761600
ES.37690.1	chrX	-	175	1	Intergenic	novelGene_30893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAATA	NA	False	NA	NA	False	NA	NA	NA	134886634	134886459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_134886500_134886600
ES.37691.1	chrX	-	1728	1	Intergenic	novelGene_30894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGCCCCAGAGACACCAA	NA	False	NA	NA	False	NA	NA	NA	134889150	134887422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_134887400_134889200
ES.37692.1	chrX	+	1871	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	-336	-3	-336	3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGGTCCATTATTTAAT	NA	False	NA	23	True	AATAAA	-20	NA	134894236	134896107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134894200_134896100
ES.37692.2	chrX	+	1722	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	-25	-165	-25	165	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAACACGAGAATTTAA	NA	False	NA	NA	False	AATAAA	-27	NA	134894547	134896269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134894500_134896300
ES.37693.1	chrX	-	1419	1	Antisense	novelGene_ENSMUSG00000048040.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATTTGTCTTCTTAGT	NA	False	NA	NA	False	CATAAA	-22	NA	134895188	134893769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_134893800_134895200
ES.37694.1	chrX	-	161	1	Intergenic	novelGene_30895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGAAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	134906826	134906665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_134906700_134906800
ES.37695.1	chrX	+	1599	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	-21	2	-21	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTTTGCTTCCTTT	NA	False	NA	20	True	AATAGA	-14	NA	134934094	134935693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134934100_134935700
ES.37695.2	chrX	+	940	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	-12	652	-12	-652	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGATTCTGTAAATC	NA	False	NA	9	True	AATAAA	-18	NA	134934103	134935043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_134934100_134935000
ES.37696.1	chrX	-	892	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	10	1	10	-1	multi-exon	FALSE	canonical	3	901	junction_2	34	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGTAGTTCTTTAAAG	4166	False	NA	-1	True	AATAAA	-17	NA	134968975	134967313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134967957_134968348_134968422_134968799
ES.37696.2	chrX	-	860	3	NNC	ENSMUSG00000042750.8	novel	903	3	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	483.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4223	False	NA	-2	True	AATAAA	-16	NA	134968918	134967314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134967957_134968348_134968448_134968799
ES.37696.3	chrX	-	791	3	NNC	ENSMUSG00000042750.8	novel	903	3	NA	NA	99	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	450.5	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTAGTTCTTTAAA	4255	False	NA	-2	True	AATAAA	-16	NA	134968886	134967314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134967946_134968348_134968422_134968799
ES.37697.1	chrX	-	3079	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	75	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	20.3869443517169	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCAGTTTGGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	134985977	134972772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981811_134982111_134982185_134985845
ES.37697.10	chrX	-	4629	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	20	-4	intron_retention	FALSE	canonical	0	0	junction_10	21.0023514262594	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985971	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977247_134977484_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.11	chrX	-	4867	16	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	13	-4	intron_retention	FALSE	canonical	2	9	junction_15	16.8214149226514	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985978	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979810_134979920_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134985845
ES.37697.13	chrX	-	3209	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.6530264126108	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985987	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982051_134982152_134982185_134985845
ES.37697.14	chrX	-	3023	20	NIC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	18.5366299040426	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985983	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.15	chrX	-	4643	17	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-4	intron_retention	FALSE	canonical	2	9	junction_16	20.3838171106395	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985977	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134985845
ES.37697.16	chrX	-	2971	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	21.6076118275225	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985983	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974797_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ES.37697.17	chrX	-	4028	7	NIC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	7469	-4	intron_retention	FALSE	canonical	3	57	junction_6	6.18465843842649	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134978522	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134974232_134974604_134974779_134975448_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009
ES.37697.18	chrX	-	7195	15	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-4	intron_retention	TRUE	non_canonical	0	0	junction_14	19.6432467493829	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985977	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982775_134984656
ES.37697.19	chrX	-	4953	17	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-9	intron_retention	FALSE	canonical	1	1	junction_3	23.0702053523587	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAACATTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134985977	134972856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974797_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982051_134985845
ES.37697.2	chrX	-	5041	17	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-5	75	intron_retention	FALSE	canonical	3	19	junction_15	16.5600233997419	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCAGTTTGGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	134985996	134972772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.20	chrX	-	2985	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	19.4543289302773	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAACATTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134985977	134972856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.21	chrX	-	4942	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_4	18.7069670787103	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAACATTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	134985991	134972856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975734_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982182_134985845
ES.37697.22	chrX	-	4424	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	-12	intron_retention	FALSE	canonical	2	9	junction_18	16.6396076639408	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134986004	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134985845
ES.37697.23	chrX	-	2999	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	19.8092006939443	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985977	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976352_134976752_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.24	chrX	-	4600	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-1	-12	intron_retention	FALSE	canonical	3	19	junction_17	16.1046922078974	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985992	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.25	chrX	-	6641	9	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	5249	-12	intron_retention	FALSE	canonical	3	40	junction_7	12.211034968421	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134980742	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134976639_134976756_134976865_134977009_134977066_134977135_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308
ES.37697.26	chrX	-	3177	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-1	-12	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_18	15.8281981272563	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985992	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.27	chrX	-	4867	16	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	13	-12	intron_retention	FALSE	non_canonical	0	0	junction_15	19.1745201301681	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985978	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981874_134985845
ES.37697.28	chrX	-	2855	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	49	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.368263472583	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985942	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979777_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981811_134982111_134982185_134985845
ES.37697.29	chrX	-	2905	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	18.6159613402182	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985991	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134982111_134982182_134985845
ES.37697.3	chrX	-	4805	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	9	75	intron_retention	FALSE	canonical	3	32	junction_18	13.2880016426219	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCAGTTTGGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	134985982	134972772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982182_134985845
ES.37697.30	chrX	-	2935	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.6530264126108	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985977	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981754_134982111_134982185_134985845
ES.37697.31	chrX	-	2981	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	14.4216288782296	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	134985977	134972859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ES.37697.32	chrX	-	2887	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	20	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	20.4431513635528	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAAGGAACATTTG	NA	False	NA	NA	False	AATAAA	-11	NA	134985971	134972861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134979575_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.33	chrX	-	2800	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	14	-251	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.8444237147492	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTATTACAGGACACA	NA	False	NA	NA	False	ATTAAA	-19	NA	134985977	134973098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979050_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134982111_134982182_134985845
ES.37697.34	chrX	-	4131	16	NIC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	21	-895	intron_retention	FALSE	canonical	3	12	junction_11	17.5042851896329	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCCTCACCATGTCACA	NA	False	NA	NA	False	NA	NA	NA	134985970	134973742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982182_134985845
ES.37697.4	chrX	-	2962	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_18	19.3735214489605	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134985995	134972847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981866_134985845
ES.37697.5	chrX	-	3081	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134985995	134972847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
ES.37697.6	chrX	-	2951	19	FSM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	27	0	14	0	multi-exon	FALSE	canonical	3	12	junction_14	17.7173452014588	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134985977	134972847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ES.37697.7	chrX	-	4779	18	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	8	-4	intron_retention	FALSE	canonical	1	2	junction_16	21.8278892109348	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985983	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981811_134982111_134982185_134985845
ES.37697.8	chrX	-	3105	19	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_18	14.516168082606	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985982	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ES.37697.9	chrX	-	4908	17	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	8	-4	intron_retention	FALSE	canonical	3	32	junction_16	12.9301005409857	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACATTTGTGTTTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	134985983	134972851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977205_134977484_134979055_134979529_134979619_134979739_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134982182_134985845
ES.37698.1	chrX	+	139	1	Intergenic	novelGene_30896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	5226	False	NA	NA	False	NA	NA	NA	135014076	135014215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135014100_135014200
ES.37699.1	chrX	-	213	1	Intergenic	novelGene_30897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATACAAATTCATGTC	3033	False	NA	NA	False	NA	NA	NA	135022292	135022079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_135022100_135022300
ES.377.1	chr1	+	229	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAAGCTGAGCAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	43160577	43160806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_43160600_43160800
ES.3770.1	chr10	+	176	1	Intergenic	novelGene_2863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACATTGTACAACT	NA	False	NA	NA	False	NA	NA	NA	115801624	115801800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_115801600_115801800
ES.37700.1	chrX	-	175	1	Intergenic	novelGene_30898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGGGATAATAT	4773	False	NA	NA	False	NA	NA	NA	135031322	135031147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_135031100_135031300
ES.37701.1	chrX	+	880	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	-40	-3	-40	3	multi-exon	FALSE	canonical	3	2369	junction_2	964	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCAGTCATCTTCTACT	NA	False	NA	NA	False	AATAAA	-20	NA	135039704	135041195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135039916_135040271_135040349_135040603
ES.37701.3	chrX	+	2555	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	53	-1771	53	1771	multi-exon	FALSE	canonical	3	2369	junction_2	964	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTTCAGAGTAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	135039797	135042963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135039916_135040271_135040349_135040603
ES.37701.5	chrX	+	660	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	127	-8	at_least_one_novel_splicesite	FALSE	canonical	3	241	junction_2	2028	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAATATATGCTCAGT	NA	False	NA	NA	False	AATAAA	-9	NA	135039871	135041184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135039916_135040271_135040307_135040603
ES.37701.6	chrX	+	792	2	ISM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	393	8	393	-8	3prime_fragment	FALSE	canonical	3	2369	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAATATATGCTCAGT	NA	False	NA	NA	False	AATAAA	-9	NA	135040137	135041184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_135040349_135040603
ES.37702.1	chrX	+	177	1	Intergenic	novelGene_30899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAGGTGAGT	NA	False	NA	NA	False	NA	NA	NA	135054225	135054402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135054200_135054400
ES.37703.1	chrX	+	3675	3	Intergenic	novelGene_30900	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCATGTCTCTCTGGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	135072364	135109360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135072478_135105594_135108304_135108507
ES.37704.1	chrX	-	1162	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	89	-1	-2	1	multi-exon	FALSE	canonical	3	703	junction_2	29	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTTAAGACTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	135073002	135070828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135071799_135072384_135072455_135072880
ES.37704.2	chrX	-	1360	3	FSM	ENSMUSG00000051579.11	ENSMUST00000136533.2	417	3	-38	-905	12	-3	multi-exon	FALSE	canonical	2	30	junction_1	336.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTGGTTAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	135072988	135070832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135071799_135072168_135072455_135072880
ES.37704.3	chrX	-	915	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	91	244	0	-244	multi-exon	FALSE	canonical	3	703	junction_2	29	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGTGGTGTGTTT	NA	False	NA	-15	True	NA	NA	NA	135073000	135071073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135071799_135072384_135072455_135072880
ES.37704.4	chrX	-	649	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	122	479	-4	325	multi-exon	FALSE	canonical	3	703	junction_2	29	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGTTATGTAGTTTC	NA	False	NA	-14	True	NA	NA	NA	135072969	135071308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135071799_135072384_135072455_135072880
ES.37704.5	chrX	-	493	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	118	639	-8	165	multi-exon	FALSE	canonical	3	703	junction_2	29	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAGACATTCCCGAAG	NA	False	NA	NA	False	AAGAAA	-23	NA	135072973	135071468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135071799_135072384_135072455_135072880
ES.37705.1	chrX	+	1357	4	NNC	ENSMUSG00000079428.9	novel	453	4	NA	NA	82	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.98887651569859	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTAAGACTTGATC	NA	False	NA	NA	False	AATAAA	-12	NA	135115609	135126843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135115753_135115872_135116173_135125650_135125722_135126000
ES.37705.2	chrX	+	1342	3	NIC	ENSMUSG00000079428.9	novel	453	4	NA	NA	217	-6	intron_retention	FALSE	canonical	2	9	junction_1	2	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTAAGACTTGATC	NA	False	NA	NA	False	AATAAA	-12	NA	135115744	135126843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_135116173_135125650_135125722_135126000
ES.37705.3	chrX	+	1315	4	NNC	ENSMUSG00000079428.9	novel	453	4	NA	NA	411	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3.55902608401044	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACTTGATCATTTCATG	NA	False	NA	NA	False	AATAAA	-20	NA	135115938	135126851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135116173_135121881_135122041_135125650_135125722_135126000
ES.37706.1	chrX	-	887	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	-20	-1	-20	1	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTACTCATCTTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	135116282	135114719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135115333_135115652_135115730_135116085
ES.37706.3	chrX	-	1482	1	NIC	ENSMUSG00000050071.9	novel	866	3	NA	NA	-11	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTACTCATCTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135116203	135114721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135114700_135116200
ES.37706.4	chrX	-	787	3	NNC	ENSMUSG00000050071.9	novel	866	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	554	junction_2	2020.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTACTCATCTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135116092	135114721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135115333_135115652_135115730_135115993
ES.37706.5	chrX	-	836	3	FSM	ENSMUSG00000050071.9	ENSMUST00000113118.2	754	3	-42	-40	-13	0	multi-exon	FALSE	canonical	3	367	junction_1	2702.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTACTCATCTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135116275	135114721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135115333_135115694_135115730_135116085
ES.37707.1	chrX	-	177	1	Intergenic	novelGene_30901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGACACT	NA	False	NA	NA	False	NA	NA	NA	135127379	135127202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_135127200_135127400
ES.37708.1	chrX	+	1076	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	-43	-14	-43	14	multi-exon	FALSE	canonical	3	2732	junction_2	36	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTTTAAAACTCCT	NA	False	NA	22	True	AATAAA	-38	NA	135145784	135147902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135145977_135146449_135146516_135147084
ES.37708.2	chrX	+	793	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	4	222	4	-222	multi-exon	FALSE	canonical	3	2732	junction_2	36	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTTCTGATGGGATAC	NA	False	NA	85	True	NA	NA	NA	135145831	135147666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135145977_135146449_135146516_135147084
ES.37708.3	chrX	+	871	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	48	100	48	-100	multi-exon	FALSE	canonical	3	2732	junction_2	36	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTTTCTTCTGCTTA	NA	False	NA	-92	True	TATAAA	-14	NA	135145875	135147788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135145977_135146449_135146516_135147084
ES.37708.4	chrX	+	822	2	NNC	ENSMUSG00000042712.11	novel	1019	3	NA	NA	342	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGAATCCAACAGC	NA	False	NA	-3	True	AATAAA	-13	NA	135146773	135147877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135146803_135147084
ES.37708.5	chrX	+	952	1	NIC	ENSMUSG00000042712.11	novel	1019	3	NA	NA	494	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGAATCCAACAGC	NA	False	NA	-3	True	AATAAA	-13	NA	135146925	135147877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_135146900_135147900
ES.37709.1	chrX	+	180	1	Intergenic	novelGene_30902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	135160283	135160463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135160300_135160500
ES.3771.1	chr10	-	207	1	Intergenic	novelGene_2864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGGGTGAAGCTAAC	NA	False	NA	NA	False	NA	NA	NA	115817671	115817464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_115817500_115817700
ES.37710.1	chrX	+	947	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	-127	6	-75	-6	multi-exon	FALSE	canonical	3	533	junction_2	2270	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGCCACAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	135170926	135172707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135171151_135171558_135171632_135172057
ES.37710.2	chrX	+	978	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	-68	20	-60	-6	multi-exon	FALSE	canonical	3	4289	junction_2	392	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGCCACAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	135170941	135172707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135171151_135171558_135171632_135172011
ES.37710.3	chrX	+	601	2	NNC	ENSMUSG00000046432.13	novel	933	3	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTGTGTCCTTAAAGCA	NA	False	NA	NA	False	AATAAA	-15	NA	135171014	135172668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135171084_135172136
ES.37710.5	chrX	+	937	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	-5	-106	-5	92	multi-exon	FALSE	canonical	3	533	junction_2	2270	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTTAGTGCAGGTGTA	NA	False	NA	NA	False	CATAAA	-19	NA	135171048	135172819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135171151_135171558_135171632_135172057
ES.37710.6	chrX	+	3272	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	39	-2381	-5	2381	multi-exon	FALSE	canonical	3	4289	junction_2	392	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCAAAAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	135171048	135175108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135171151_135171558_135171632_135172011
ES.37710.7	chrX	+	599	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	10	217	10	-173	multi-exon	FALSE	canonical	3	533	junction_2	2270	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTTTGTGGTGAGCCTT	NA	False	NA	-2	True	NA	NA	NA	135171063	135172496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135171151_135171558_135171632_135172057
ES.37710.8	chrX	+	774	3	NNC	ENSMUSG00000046432.13	novel	930	3	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2536.5	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCATTATTGTGTCCT	NA	False	NA	NA	False	AATAAA	-8	NA	135171070	135172661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135171151_135171558_135171603_135172011
ES.37710.9	chrX	+	784	3	NNC	ENSMUSG00000046432.13	novel	933	3	NA	NA	22	-10	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_2	2519	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAATCATTATTGTGTC	NA	False	NA	NA	False	AATAAA	-6	NA	135171075	135172659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135171151_135171558_135171632_135172023
ES.37711.1	chrX	+	1162	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	34	1607	34	-1607	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAATGTTTCTTCTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	135608764	135610620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135608838_135609531
ES.37712.1	chrX	+	4048	17	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-64	1474	intron_retention	FALSE	canonical	0	0	junction_11	9.60468635614927	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTACAGTGTTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	135642508	135736908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135644422_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135689269_135689367_135721178_135721330_135723519_135723667_135723787_135723897_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.10	chrX	+	4571	18	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-8	-1176	intron_retention	FALSE	canonical	0	0	junction_9	8.72414618421761	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTTGCCCAAATCT	NA	False	NA	NA	False	AATAAA	-20	NA	135642564	135737371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135644422_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.11	chrX	+	4538	20	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	4	535	multi-exon	TRUE	non_canonical	0	0	junction_10	9.09232424140293	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135642576	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135644291_135644422_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738481_135738551
ES.37712.12	chrX	+	3486	14	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.4281140255646	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAAAAATGAGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	135642577	135704102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135687853_135689367_135694834_135694904_135695116_135695256_135703600
ES.37712.13	chrX	+	4399	19	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	5	535	multi-exon	FALSE	non_canonical	0	0	junction_9	8.58292879305582	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135642577	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738521_135738599
ES.37712.14	chrX	+	1679	10	NIC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.7920867214116	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642577	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_135642700_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ES.37712.15	chrX	+	4540	20	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	5	538	multi-exon	TRUE	non_canonical	0	0	junction_10	8.34040327980644	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	135642577	135739085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738488_135738555
ES.37712.17	chrX	+	4356	10	FSM	ENSMUSG00000087368.8	ENSMUST00000134066.8	3201	10	-1146	-9	6	0	multi-exon	FALSE	canonical	0	0	junction_8	8.4648875354404	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	135642578	135704113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ES.37712.18	chrX	+	2956	11	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.3097041664637	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642579	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642720_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135662838_135689269_135689367_135703600
ES.37712.19	chrX	+	4600	19	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	10	535	multi-exon	FALSE	canonical	0	0	junction_10	7.94425019187532	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135642582	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.2	chrX	+	3641	18	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-35	-342	multi-exon	FALSE	canonical	0	0	junction_9	8.24663085236783	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTCAGCATTTTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	135642537	135738205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.20	chrX	+	4829	22	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-8	538	multi-exon	FALSE	non_canonical	0	0	junction_10	9.14236109765466	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	135642586	135739085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135687853_135688058_135689269_135689367_135721178_135721330_135723519_135723667_135723787_135723897_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738517_135738599
ES.37712.21	chrX	+	1727	11	NIC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.91291198206288	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642587	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ES.37712.22	chrX	+	2925	11	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.76729235765982	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642590	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135662838_135689269_135689367_135703600
ES.37712.23	chrX	+	3723	19	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	1	-344	multi-exon	FALSE	canonical	0	0	junction_10	8.06225774829855	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTATCTCAGCATTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	135642595	135738203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642720_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659313_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.24	chrX	+	3132	12	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.386736615543	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	135642596	135704113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135662838_135687853_135688058_135689269_135689367_135703600
ES.37712.25	chrX	+	4519	20	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	3	533	multi-exon	FALSE	non_canonical	0	0	junction_10	8.53832812038825	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACATCGTGTCCTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	135642597	135739080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642720_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662837_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738517_135738599
ES.37712.26	chrX	+	4716	21	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	6	535	multi-exon	TRUE	non_canonical	0	0	junction_10	8.6278618440492	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135642600	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135687853_135688058_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738462_135738531
ES.37712.27	chrX	+	1804	12	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	10.386736615543	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642610	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135661639_135662739_135662838_135689269_135689367_135703600
ES.37712.28	chrX	+	4767	18	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-9	785	multi-exon	FALSE	canonical	0	0	junction_9	8.49994911444162	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTCTCTCTCTC	NA	False	NA	NA	False	AGTAAA	-19	NA	135642627	135739332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642720_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.29	chrX	+	2161	12	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-120	0	intron_retention	FALSE	canonical	0	0	junction_9	10.1174916043274	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135644028	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135644422_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135684273_135684358_135689269_135689367_135703600
ES.37712.3	chrX	+	3220	10	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-31	0	intron_retention	FALSE	canonical	0	0	junction_8	9.74616100426151	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642541	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659313_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ES.37712.30	chrX	+	2709	10	Fusion	ENSMUSG00000082214.2_ENSMUSG00000087368.8	novel	697	5	NA	NA	1694	0	multi-exon	FALSE	non_canonical	0	0	junction_1	9.68389269755597	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135645842	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135647084_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ES.37712.31	chrX	+	4341	10	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	4699	7	NA	NA	-3758	-37	intron_retention	FALSE	canonical	0	0	junction_1	3.59354702862138	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	135662597	135738510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135662838_135675291_135675465_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.32	chrX	+	601	2	ISM	ENSMUSG00000087368.8	ENSMUST00000145620.2	768	3	22912	11	22912	-2	3prime_fragment	FALSE	canonical	3	16	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAAAAATGAGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	135689267	135704102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_135689367_135703600
ES.37712.33	chrX	+	2951	1	Intergenic	novelGene_30903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAGGTAGAAAGCAGCCA	NA	False	NA	NA	False	GATAAA	-29	NA	135691803	135694754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135691800_135694800
ES.37712.34	chrX	+	4921	5	NNC	ENSMUSG00000031425.16	novel	4699	7	NA	NA	-282	538	intron_retention	TRUE	non_canonical	0	0	junction_4	4.06201920231798	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	135731628	135739085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135734186_135734903_135734978_135735847_135735914_135736788_135738467_135738539
ES.37712.35	chrX	+	2233	2	NNC	ENSMUSG00000031425.16	novel	4699	7	NA	NA	2779	535	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135736778	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135738497_135738567
ES.37712.4	chrX	+	3126	12	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	9.57700413827116	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	135642545	135704113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135642720_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135661538_135662838_135689269_135689367_135703600
ES.37712.5	chrX	+	4520	20	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-11	535	multi-exon	FALSE	non_canonical	0	0	junction_9	9.15547457434296	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGTGTCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	135642561	135739082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135642700_135644151_135644210_135645241_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135723787_135723897_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788_135738517_135738599
ES.37712.6	chrX	+	1801	11	NIC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	8.87749964798648	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATGAGTGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	135642562	135704104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_135642720_135644151_135644210_135645241_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135689269_135689367_135703600
ES.37712.7	chrX	+	6097	16	Fusion	ENSMUSG00000087368.8_ENSMUSG00000031425.16	novel	3201	10	NA	NA	-10	-345	intron_retention	FALSE	canonical	0	0	junction_7	8.77015139866784	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATCTCAGCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	135642562	135738202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_135645458_135648071_135648198_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135721178_135721330_135723519_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ES.37712.8	chrX	+	4142	8	NNC	ENSMUSG00000087368.8	novel	3201	10	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_6	10.4978131833565	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	135642562	135704113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135645458_135648071_135648198_135658849_135658946_135659313_135659508_135660604_135660668_135661166_135661325_135689269_135689367_135703600
ES.37712.9	chrX	+	1350	1	Genic_Genomic	ENSMUSG00000087368.8	novel	NA	NA	NA	NA	-8	-1422	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCTGTTCTGGCACATC	NA	False	NA	NA	False	NA	NA	NA	135642564	135643914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_135642600_135643900
ES.37713.1	chrX	-	3347	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	70	-1558	-6	1547	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTGAATGGAAGTAAAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	135642031	135632143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ES.37713.10	chrX	-	1893	5	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1540.21465630606	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135643644	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135642141_135642236_135643572
ES.37713.11	chrX	-	1975	5	NIC	ENSMUSG00000031422.17	novel	1926	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	1536.30213499819	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642032	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641694_135641869_135641958
ES.37713.12	chrX	-	1972	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	-2	0	intron_retention	FALSE	canonical	1	10	junction_3	1467.06108333028	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642027	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641782
ES.37713.13	chrX	-	1942	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1471.73797486736	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642426	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135642211
ES.37713.14	chrX	-	5979	3	NIC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2872	junction_1	34	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642028	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135635251_135636294_135640644_135641958
ES.37713.16	chrX	-	1827	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	-16	0	-16	0	multi-exon	FALSE	canonical	3	42	junction_3	1452.09664508485	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135643683	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
ES.37713.17	chrX	-	1790	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_3	1461.4491286239	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642024	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641950
ES.37713.18	chrX	-	1775	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1484.46091973559	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642027	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635237_135636290_135636372_135640553_135640644_135641958
ES.37713.2	chrX	-	2001	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	-131	-11	-131	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642232	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ES.37713.20	chrX	-	1810	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	4	11	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135644435	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
ES.37713.21	chrX	-	1733	5	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1329.68574764867	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642027	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135634851_135634902_135635251_135636294_135636372_135640553_135640644_135641958
ES.37713.23	chrX	-	1779	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1484.46091973559	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642027	135633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635245_135636294_135636372_135640553_135640644_135641958
ES.37713.26	chrX	-	1696	3	NIC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-8	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1436	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCAAAAAAAAAAATGTG	NA	False	NA	NA	False	AATAAA	-18	NA	135642033	135633706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135635251_135636294_135636372_135641958
ES.37713.27	chrX	-	1309	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	70	480	-6	402	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTACCAGTGTATG	NA	False	NA	NA	False	AATAAA	-29	NA	135642031	135634181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ES.37713.4	chrX	-	1759	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	1464.72272688952	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135641997	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641965
ES.37713.5	chrX	-	3117	3	FSM	ENSMUSG00000031422.17	ENSMUST00000131923.2	828	3	-801	-1488	-8	0	multi-exon	FALSE	canonical	3	2872	junction_1	225.5	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642033	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553
ES.37713.6	chrX	-	6531	1	NIC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	1011	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1034	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135640221	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135633700_135640200
ES.37713.7	chrX	-	1785	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1471.73797486736	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642027	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135635251_135636294_135636372_135640553_135640633_135641958
ES.37713.8	chrX	-	2065	4	FSM	ENSMUSG00000031422.17	ENSMUST00000166930.8	1926	4	-128	-11	-7	0	multi-exon	FALSE	canonical	3	36	junction_3	1454.90228766975	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642032	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641694
ES.37713.9	chrX	-	1731	3	FSM	ENSMUSG00000031422.17	ENSMUST00000169418.8	1782	3	62	-11	-14	0	multi-exon	FALSE	canonical	3	16	junction_1	1462	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135642039	135633690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135635251_135640553_135640644_135641958
ES.37714.1	chrX	+	180	1	Intergenic	novelGene_30904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAACAAAGCTTT	7631	False	NA	NA	False	NA	NA	NA	135750346	135750526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135750300_135750500
ES.37715.1	chrX	+	1081	1	FSM	ENSMUSG00000048155.5	ENSMUST00000059808.5	1052	1	-32	3	-32	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGTTTCTGCTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	135828041	135829122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135828000_135829100
ES.37716.1	chrX	-	643	4	NNC	ENSMUSG00000089996.7	novel	450	3	NA	NA	27	270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.0138878843403	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTCTTGAGCAGA	NA	False	NA	NA	False	AATAAA	-10	NA	135858747	135855743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135855941_135855990_135856232_135857483_135857589_135858647
ES.37716.2	chrX	-	446	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	3	1	3	-1	multi-exon	FALSE	canonical	3	182	junction_2	19	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGTAACTTCCTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	135858771	135856014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135856232_135857483_135857589_135858647
ES.37716.3	chrX	-	519	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	18	279	18	-279	multi-exon	FALSE	canonical	3	70	junction_2	61.5918465022405	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGTGTAACTTCCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	135877600	135856015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
ES.37716.4	chrX	-	401	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	35	3	35	-3	multi-exon	FALSE	canonical	3	31	junction_1	50	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTGTGTAACTTCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	135877588	135874773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135874989_135876146_135876252_135877507
ES.37717.1	chrX	-	2647	2	FSM	ENSMUSG00000044348.15	ENSMUST00000171738.2	2567	2	-78	-2	-21	2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTAGTGAGTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	135893859	135881868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_135884371_135893714
ES.37718.1	chrX	+	2311	4	FSM	ENSMUSG00000031428.12	ENSMUST00000101227.3	2045	4	-3	-263	1	1	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCAGGGGTGTTCTATTT	7902	False	NA	8	True	AATAAA	-24	NA	135893904	135897128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135894154_135894455_135894511_135894679_135894820_135895261
ES.37719.1	chrX	+	177	1	Intergenic	novelGene_30905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGAATTGTCGGTGT	NA	False	NA	NA	False	NA	NA	NA	135920929	135921106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135920900_135921100
ES.3772.1	chr10	-	2639	1	FSM	ENSMUSG00000074734.4	ENSMUST00000099261.3	2254	1	-387	2	-387	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTTTATGTTTTGG	NA	False	NA	NA	False	AATAAA	-40	NA	115950209	115947570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_115947600_115950200
ES.37720.1	chrX	+	8883	1	Antisense	novelGene_ENSMUSG00000044348.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAACCAAAAACAAGGT	NA	False	NA	NA	False	NA	NA	NA	135928045	135936928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_135928000_135936900
ES.37721.1	chrX	-	6180	7	NNC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	-8	2663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.8394724940223	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTGATGTTCACTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	135938789	135899103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938678
ES.37721.10	chrX	-	3143	6	NIC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	10	-268	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGTTGTACTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	135939038	135902071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
ES.37721.12	chrX	-	3468	9	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	8	-270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.3320046228257	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGGTTGTACTAAGT	NA	False	NA	NA	False	NA	NA	NA	135939040	135902073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135929326_135929447_135930774_135930856_135932354_135932479_135933099_135933250_135938914
ES.37721.13	chrX	-	3329	8	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	10	-270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	12.6006154692571	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGGTTGTACTAAGT	NA	False	NA	NA	False	NA	NA	NA	135939038	135902073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135907964_135908071_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938914
ES.37721.14	chrX	-	7316	5	NIC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	4	-270	intron_retention	FALSE	canonical	3	20	junction_4	7.79021822544144	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCAAGGTTGTACTAAGT	NA	False	NA	NA	False	NA	NA	NA	135939017	135902073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135933250_135938914
ES.37721.15	chrX	-	1754	7	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	10	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.8298241725337	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTAGTTTATTCATTTA	NA	False	NA	NA	False	NA	NA	NA	135939038	135903520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930796_135930857_135933099_135933250_135938914
ES.37721.16	chrX	-	1546	5	NIC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	-7	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.6597829569371	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTATCCCTAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	135938788	135903527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917085_135933099_135933250_135938636
ES.37721.17	chrX	-	5317	5	NIC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	3	254	intron_retention	FALSE	canonical	0	0	junction_4	15.5944701737507	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTCAGAGGAGACTT	NA	False	NA	NA	False	NA	NA	NA	135938754	135904045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135933250_135938678
ES.37721.18	chrX	-	176	1	Intergenic	novelGene_30906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	135921911	135921735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_135921700_135921900
ES.37721.19	chrX	-	2154	1	Intergenic	novelGene_30907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTGTGGACAGGACACC	NA	False	NA	NA	False	NA	NA	NA	135924901	135922747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_135922700_135924900
ES.37721.2	chrX	-	3511	7	NNC	ENSMUSG00000044348.15	novel	3440	7	NA	NA	3565	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	13.5359603361646	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTGGCTCTTACTG	NA	False	NA	NA	False	ATTAAA	-27	NA	135935192	135901754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135935091
ES.37721.3	chrX	-	7564	5	NIC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	2	4	intron_retention	FALSE	canonical	0	0	junction_4	15.5944701737507	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGAGAGTTTAAATTAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	135938755	135901799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135933250_135938678
ES.37721.4	chrX	-	3480	7	NNC	ENSMUSG00000044348.15	novel	3440	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.8394724940223	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGTGAGAGTTTAAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	135938789	135901803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938678
ES.37721.5	chrX	-	6963	6	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	-8	-2	intron_retention	FALSE	canonical	1	1	junction_1	13.7898513407506	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAATGTGAGAGTTTAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	135939035	135901805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135903011_135903649_135904559_135916005_135916132_135916997_135917089_135928738_135933250_135938914
ES.37721.6	chrX	-	3474	7	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.0724477007517	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATGTGAGAGTTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	135939023	135901807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938914
ES.37721.7	chrX	-	3414	6	NIC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	11.7813411800185	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGAATGTGAGAGTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	135939046	135901808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135933099_135933250_135938914
ES.37721.8	chrX	-	3211	7	NNC	ENSMUSG00000044348.15	novel	1737	7	NA	NA	-6	-267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.8394724940223	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTTGTACTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	135938787	135902070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938678
ES.37721.9	chrX	-	3234	7	NNC	ENSMUSG00000044348.15	novel	1740	7	NA	NA	1	-268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.0724477007517	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGTTGTACTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	135939047	135902071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930857_135933099_135933250_135938914
ES.37722.1	chrX	+	8527	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-226	-2	-226	2	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGTGTGTGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	135950116	135983254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.10	chrX	+	4558	7	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	20	-3572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0185071014251	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTTCCAGTGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	135950362	135979680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135950546_135950694_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.11	chrX	+	8232	7	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.0185071014251	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	135950363	135983252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228_135982780_135982825
ES.37722.12	chrX	+	8124	7	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0185071014251	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	135950368	135983252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135950546_135950694_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.13	chrX	+	3759	1	Intergenic	novelGene_30908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	135965071	135968830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_135965100_135968800
ES.37722.14	chrX	+	2440	2	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	30419	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTGTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	135980761	135983248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135982773_135982819
ES.37722.15	chrX	+	6813	2	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	30537	4486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTTGAAGCTGATTT	NA	False	NA	NA	False	AATAAA	-14	NA	135980879	135987738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135982773_135982818
ES.37722.2	chrX	+	5756	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-205	2748	-205	-2748	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTGCTTAAAACTAGT	NA	False	NA	NA	False	AATAAA	-18	NA	135950137	135980504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.4	chrX	+	8293	7	NNC	ENSMUSG00000042595.8	novel	8299	6	NA	NA	-38	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	15.0185071014251	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGTGTGTGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	135950304	135983254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228_135982773_135982818
ES.37722.6	chrX	+	6695	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	-2	1606	-2	-1606	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGAAATCTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	135950340	135981646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.8	chrX	+	4727	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	7	3565	7	-3565	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGTGTTGGTTATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	135950349	135979687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37722.9	chrX	+	5119	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	7	3173	7	-3173	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTATAGAGTGGGTAGA	NA	False	NA	NA	False	NA	NA	NA	135950349	135980079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ES.37723.2	chrX	-	2224	4	NNC	ENSMUSG00000023443.14	novel	1692	4	NA	NA	359	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.1246761636296	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGCTTTGAGAGTTAT	NA	False	NA	-2	True	AATAAA	-17	NA	136020561	136016146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_136017493_136017852_136018053_136019115_136019552_136020319
ES.37723.3	chrX	-	1403	5	FSM	ENSMUSG00000023443.14	ENSMUST00000074698.3	1600	5	195	2	40	-2	multi-exon	FALSE	canonical	3	9	junction_4	18.0052075800308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGGCTTTGAGAGTTA	NA	False	NA	-3	True	AATAAA	-16	NA	136020880	136016147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319_136020446_136020692
ES.37723.4	chrX	-	1150	5	NNC	ENSMUSG00000023443.14	novel	1600	5	NA	NA	965	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	25.0636689253589	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATATTGGCTTTGAGAGT	NA	False	NA	-5	True	AATAAA	-14	NA	136019955	136016149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_136016755_136018006_136018053_136019115_136019552_136019740_136019790_136019941
ES.37724.1	chrX	-	179	1	Intergenic	novelGene_30909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	136075157	136074978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_136075000_136075200
ES.37725.1	chrX	-	182	1	Intergenic	novelGene_30910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATAAAATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	137058444	137058262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_137058300_137058400
ES.37726.1	chrX	-	208	1	Intergenic	novelGene_30911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTGAACAAAACAATGTAA	NA	False	NA	NA	False	NA	NA	NA	137219348	137219140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_137219100_137219300
ES.37727.1	chrX	+	8251	29	NNC	ENSMUSG00000052854.16	novel	6604	28	NA	NA	-64	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	1.23717914826348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTCGGTGTCATTATTG	NA	False	NA	NA	False	AATAAA	-12	NA	137815114	137911280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_137815558_137821787_137821854_137859098_137859156_137860365_137860438_137864031_137864158_137865652_137865764_137867134_137867226_137868416_137868548_137871082_137871138_137872536_137872616_137873551_137873728_137875392_137875457_137875885_137877015_137879408_137879508_137881818_137881887_137883387_137883504_137884590_137884689_137885928_137886285_137887426_137887689_137889443_137889601_137890766_137890839_137892739_137892884_137894904_137895064_137896629_137896731_137898189_137898334_137898568_137898719_137901530_137901667_137904708_137904849_137907831
ES.37727.2	chrX	+	8104	28	FSM	ENSMUSG00000052854.16	ENSMUST00000064937.14	6604	28	-63	-1437	-63	-3	multi-exon	FALSE	canonical	0	0	junction_5	1.22166092610894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGTCGGTGTCATTAT	NA	False	NA	NA	False	AATAAA	-10	NA	137815115	137911278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_137815558_137821787_137821854_137859098_137859156_137860365_137860438_137864031_137864158_137865652_137865764_137867134_137867226_137868416_137868548_137871082_137871138_137872536_137872616_137873551_137873728_137875392_137875457_137875885_137877015_137879408_137879508_137881818_137881887_137883387_137883504_137884590_137884689_137885928_137886285_137887426_137887689_137889443_137889601_137890766_137890839_137892739_137892884_137894904_137895064_137896629_137896731_137898568_137898719_137901530_137901667_137904708_137904849_137907831
ES.37728.1	chrX	-	5745	5	NIC	ENSMUSG00000031271.15	novel	2330	5	NA	NA	-1986	25	intron_retention	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTCTTAGTAGACA	NA	False	NA	NA	False	NA	NA	NA	137987971	137979980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_137981238_137981955_137982104_137982698_137982973_137983819_137984468_137984553
ES.37729.1	chrX	-	1048	1	Intergenic	novelGene_30912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCATGATTCTTTTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	138021716	138020668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_138020700_138021700
ES.3773.1	chr10	-	183	1	Intergenic	novelGene_2865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCATCTCCC	NA	False	NA	NA	False	NA	NA	NA	116181137	116180954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116181000_116181100
ES.37730.1	chrX	+	4339	5	NIC	ENSMUSG00000042515.14	novel	4523	6	NA	NA	-3	-119	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.57071421427143	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATATATGTACAAGCATA	NA	False	NA	NA	False	AATAAA	-23	NA	138110787	138138963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_138110967_138113839_138113988_138132034_138132164_138134427_138134595_138135247
ES.37730.2	chrX	+	6332	4	ISM	ENSMUSG00000042515.14	ENSMUST00000113045.9	4523	6	994	2	930	0	3prime_fragment	FALSE	canonical	2	2	junction_1	2.82842712474619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTGTATTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	138111786	138139082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_138113988_138132034_138132164_138134427_138134595_138135247
ES.37730.3	chrX	+	4340	5	FSM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	-2	5	-2	-3	multi-exon	FALSE	canonical	0	0	junction_1	3.76662979332984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTTTGTATTATTT	NA	False	NA	NA	False	NA	NA	NA	138117912	138139079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138117964_138118896_138119058_138132034_138132164_138134427_138134595_138135247
ES.37730.4	chrX	+	4172	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	9	1	9	1	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTATTATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	138117923	138139083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
ES.37730.5	chrX	+	3997	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	9	176	9	-174	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGATGTTCATTTCACT	NA	False	NA	NA	False	AATAAA	-17	NA	138117923	138138908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
ES.37730.6	chrX	+	4156	5	FSM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	10	177	10	-175	multi-exon	FALSE	canonical	0	0	junction_1	3.76662979332984	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGATGTTCATTTCAC	NA	False	NA	NA	False	AATAAA	-16	NA	138117924	138138907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138117964_138118896_138119058_138132034_138132164_138134427_138134595_138135247
ES.37730.7	chrX	+	5166	4	ISM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	105	5	105	-3	3prime_fragment	FALSE	canonical	1	1	junction_1	3.29983164553722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTTTGTATTATTT	NA	False	NA	NA	False	NA	NA	NA	138118019	138139079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_138119058_138132034_138132164_138134427_138134595_138135247
ES.37730.8	chrX	+	4254	1	NIC	ENSMUSG00000042515.14	novel	1049	5	NA	NA	1001	9135	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138118915	138123169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_138118900_138123200
ES.37731.1	chrX	+	1126	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	53	-1	53	1	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTTCACGTTAACGTC	NA	False	NA	21	True	AATAAA	-22	NA	138234484	138238919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138235157_138237570_138237800_138238694
ES.37731.10	chrX	+	538	3	NNC	ENSMUSG00000051257.4	novel	1178	3	NA	NA	1386	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1296	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138235817	138238916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138235905_138237570_138237800_138238694
ES.37731.11	chrX	+	4660	1	Genic_Genomic	ENSMUSG00000051257.4	novel	NA	NA	NA	NA	1706	1879	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGGAAAAAGAATTCT	NA	False	NA	NA	False	NA	NA	NA	138236137	138240797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_138236100_138240800
ES.37731.2	chrX	+	1023	3	NNC	ENSMUSG00000051257.4	novel	1178	3	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1295	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTTTCACGTTAACG	NA	False	NA	19	True	AATAAA	-20	NA	138234495	138238917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138235157_138237660_138237800_138238694
ES.37731.3	chrX	+	2907	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	150	-1879	150	1879	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGGAAAAAGAATTCT	NA	False	NA	NA	False	NA	NA	NA	138234581	138240797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138235157_138237570_138237800_138238694
ES.37731.4	chrX	+	488	3	NNC	ENSMUSG00000051257.4	novel	1178	3	NA	NA	164	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1295.5	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTTTCACGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	138234595	138238916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138234633_138237570_138237800_138238694
ES.37731.5	chrX	+	1636	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	168	-626	168	626	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTTCAAACAATAGATG	NA	False	NA	NA	False	NA	NA	NA	138234599	138239544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138235157_138237570_138237800_138238694
ES.37731.6	chrX	+	1818	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	175	-815	175	815	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACATAGTGTTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	138234606	138239733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138235157_138237570_138237800_138238694
ES.37731.7	chrX	+	915	4	NNC	ENSMUSG00000051257.4	novel	1178	3	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1325.40115520631	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTTTCACGTTAACG	NA	False	NA	19	True	AATAAA	-20	NA	138234609	138238917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138235033_138235116_138235157_138237570_138237800_138238694
ES.37731.9	chrX	+	954	4	NNC	ENSMUSG00000051257.4	novel	1178	3	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1325.40115520631	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGTTTCACGTTAACG	NA	False	NA	19	True	AATAAA	-20	NA	138234609	138238917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138235020_138235064_138235157_138237570_138237800_138238694
ES.37732.1	chrX	-	6283	21	NNC	ENSMUSG00000086807.9	novel	3511	20	NA	NA	-42399	1695	intron_retention	FALSE	canonical	0	0	junction_3	14.5047406043679	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATAGAGTCGACATAC	NA	False	NA	NA	False	AATAAA	-13	NA	138300886	138139279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138142241_138167825_138167910_138172108_138172399_138176005_138176164_138176451_138176595_138178507_138178590_138179722_138179832_138184890_138185112_138185746_138185826_138186355_138186405_138187583_138188006_138189936_138190099_138190476_138190597_138193057_138193154_138195525_138195681_138214405_138214474_138230185_138230243_138255752_138255851_138257038_138257123_138297305_138297544_138300279
ES.37732.2	chrX	-	2519	5	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	9	2196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACCTTCTCACTGAATT	NA	False	NA	NA	False	NA	NA	NA	138258478	138246043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138247568_138247998_138248640_138248715_138248851_138255752_138255851_138258357
ES.37732.3	chrX	-	2106	5	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	29	1253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.53834841531101	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATATACTACTGTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	138258458	138246986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138248640_138255752_138255851_138257038_138257123_138257973_138258140_138258353
ES.37732.4	chrX	-	1896	4	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	29	1213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18241233033047	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTAAGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	138258458	138247026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138248640_138255752_138255851_138257038_138257123_138258357
ES.37732.5	chrX	-	1577	4	NNC	ENSMUSG00000086807.9	novel	712	4	NA	NA	7	872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.18241233033047	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGAATGTCTACTG	NA	False	NA	NA	False	NA	NA	NA	138258480	138247367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138248640_138255752_138255851_138257038_138257123_138258357
ES.37732.6	chrX	-	3404	2	Intergenic	novelGene_30913	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	68	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATACTTGGCTTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	138300885	138294745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_138297544_138300279
ES.37732.7	chrX	-	1079	3	Intergenic	novelGene_30914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTCTAGAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	138300909	138296086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_138296298_138297305_138297544_138300279
ES.37733.1	chrX	-	199	1	Intergenic	novelGene_30915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAAGAGGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	138377178	138376979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_138377000_138377200
ES.37734.1	chrX	+	3738	14	FSM	ENSMUSG00000042498.17	ENSMUST00000113030.3	3736	14	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	1.76084971419378	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTTTGGTCTCCTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	138381119	138455333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138381888_138393389_138393533_138395792_138395986_138407440_138407550_138407749_138407842_138407943_138408067_138412293_138412399_138413891_138414057_138414982_138415144_138415834_138416011_138432466_138432529_138443684_138443976_138445775_138445944_138454151
ES.37735.1	chrX	+	3139	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	-391	2	-391	-2	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGTGTTCGATTTAGC	NA	False	NA	NA	False	AATAAA	-20	NA	138510977	138573892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ES.37735.2	chrX	+	2534	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	-30	246	-30	-239	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAGCTATTGAAAAGA	NA	False	NA	NA	False	AATAAA	-28	NA	138511338	138573648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ES.37735.3	chrX	+	3734	7	NNC	ENSMUSG00000031438.12	novel	2750	7	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.4656919157726	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGTATCTGGTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	138511339	138573884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138566031_138566120_138566290_138572215
ES.37735.4	chrX	+	3530	6	NIC	ENSMUSG00000031438.12	novel	2750	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_2	10.3421467790783	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTATCTGGTGTTCGAT	NA	False	NA	NA	False	AATAAA	-15	NA	138511368	138573887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138566290_138572483
ES.37735.5	chrX	+	2955	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	16	-221	16	221	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATGCATGCTTAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	138511384	138574115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ES.37735.7	chrX	+	5043	5	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	44973	12	44226	-5	3prime_fragment	FALSE	canonical	3	84	junction_1	5.49431524395898	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTGTATCTGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	138556341	138573882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ES.37736.1	chrX	+	4259	1	Genic_Genomic	ENSMUSG00000042473.9	novel	NA	NA	NA	NA	-31	-56020	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	138585713	138589972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_138585700_138590000
ES.37736.2	chrX	+	2253	4	ISM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-31	45773	-31	-37611	intron_retention	FALSE	canonical	2	3	junction_2	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATAATTTTGCTCTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	138585713	138608381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704
ES.37736.3	chrX	+	5953	21	FSM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-31	-828	-31	828	multi-exon	FALSE	canonical	0	0	junction_6	1.5644487847162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAATGTTTTATTATGC	NA	False	NA	NA	False	ACTAAA	-2	NA	138585713	138654982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704_138606931_138607865_138608107_138613002_138613211_138614003_138614169_138624651_138624802_138625826_138625978_138626412_138626628_138633006_138633125_138634703_138634990_138637037_138637168_138637702_138637802_138642675_138642745_138642900_138643142_138644104_138644171_138645956_138646041_138647099_138647157_138650696_138650795_138652209
ES.37736.4	chrX	+	1413	4	ISM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	-2	46584	-2	-38422	5prime_fragment	FALSE	canonical	2	3	junction_2	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAAATTGCTTTCTAATT	NA	False	NA	NA	False	TATAAA	-34	NA	138585742	138607570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704
ES.37736.6	chrX	+	12497	18	NIC	ENSMUSG00000042473.9	novel	5094	21	NA	NA	-2	828	intron_retention	FALSE	canonical	0	0	junction_4	1.61094869854461	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAATGTTTTATTATGC	NA	False	NA	NA	False	ACTAAA	-2	NA	138585742	138654982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704_138606931_138613002_138613211_138614003_138614169_138624651_138624802_138625826_138633125_138634703_138634990_138637037_138637168_138637702_138637802_138642675_138642745_138642900_138643142_138644104_138644171_138645956_138646041_138647099_138647157_138650696_138650795_138652209
ES.37736.7	chrX	+	1594	1	Genic_Genomic	ENSMUSG00000042473.9	novel	NA	NA	NA	NA	16182	542	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATAAATAAAGAG	NA	False	NA	NA	False	NA	NA	NA	138653102	138654696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_138653100_138654700
ES.37737.10	chrX	-	4171	16	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_6	13.1121656826357	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGGCTTGAATTTGGG	NA	False	NA	-12	True	AATAAA	-17	NA	138772434	138722652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.12	chrX	-	3795	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	19.2544637681759	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTAGGCTTGAATTTG	NA	False	NA	-14	True	AATAAA	-15	NA	138772371	138722654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735324_138736684_138736730_138737228_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.13	chrX	-	4226	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	-9	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	18.6789277997962	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTAGGCTTGAATTTG	NA	False	NA	-14	True	AATAAA	-15	NA	138772435	138722654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138724163_138724714_138725394_138735158_138735332_138736180_138736237_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.14	chrX	-	3733	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.3741496401874	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGTAGGCTTGAATTTG	NA	False	NA	-14	True	AATAAA	-15	NA	138772342	138722654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138723578_138723916_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765372_138771818_138771892_138772020
ES.37737.2	chrX	-	4070	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCCATGGTGTTTT	NA	False	NA	0	True	AGTAAA	-22	NA	138772434	138722452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.22	chrX	-	2205	6	NNC	ENSMUSG00000031434.16	novel	2195	6	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	non_canonical	1	2	junction_1	20.1355407178451	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138772394	138757116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138758376_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.23	chrX	-	3276	4	FSM	ENSMUSG00000031434.16	ENSMUST00000146914.3	600	4	-282	-2394	-15	-13	multi-exon	FALSE	canonical	3	50	junction_3	2.86744175568088	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138772441	138757116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.3	chrX	-	4378	16	NNC	ENSMUSG00000031434.16	novel	4412	16	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_6	13.1121656826357	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCCATGGTGTTTT	NA	False	NA	0	True	AGTAAA	-22	NA	138772441	138722452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.7	chrX	-	4735	15	NNC	ENSMUSG00000031434.16	novel	4412	16	NA	NA	-103	-16	intron_retention	FALSE	non_canonical	0	0	junction_5	13.55130086383	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCAGCCACCGCACAAG	NA	False	NA	-16	True	AGTAAA	-6	NA	138772262	138722468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37737.8	chrX	-	3888	17	NNC	ENSMUSG00000031434.16	novel	3862	17	NA	NA	-14	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4437485471873	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGGTGTCAAATGAGA	NA	False	NA	0	True	AATAAA	-29	NA	138772440	138722640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758644_138759546_138759766_138765243_138765377_138771818_138771892_138772020
ES.37738.1	chrX	+	1436	1	Antisense	novelGene_ENSMUSG00000031433.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAGGAATAATTGTAAT	NA	False	NA	NA	False	NA	NA	NA	138896826	138898262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_138896800_138898300
ES.37739.1	chrX	-	5172	8	NNC	ENSMUSG00000031433.16	novel	726	5	NA	NA	9	-23539	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0368394817712	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGGGTCTATGTTCA	NA	False	NA	NA	False	NA	NA	NA	138899276	138813798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138814488_138816352_138819741_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.10	chrX	-	5802	10	NNC	ENSMUSG00000031433.16	novel	3728	8	NA	NA	15	1839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.5819415328763	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGAGATTTGGAAAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	138899270	138842282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138846653_138855655_138855804_138868944_138869349_138889986_138890093_138891541_138891707_138892264_138892337_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.11	chrX	-	5425	7	NNC	ENSMUSG00000031433.16	novel	2787	7	NA	NA	-4	1837	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.2842072532072	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGAGATTTGGAAAG	NA	False	NA	NA	False	AATAAA	-13	NA	138899310	138842284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138846653_138855655_138855732_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.12	chrX	-	4801	5	ISM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	7	20123	-2	3222	5prime_fragment	FALSE	canonical	3	21	junction_4	5.67890834580027	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAGTGTTTTTATTTA	NA	False	NA	NA	False	AATGAA	-15	NA	138899293	138865107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.13	chrX	-	3176	6	NNC	ENSMUSG00000031433.16	novel	2229	7	NA	NA	-2	1505	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	13.3955216397123	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTTTTGACTTAGTGG	NA	False	NA	NA	False	NA	NA	NA	138899302	138866824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138896062_138896146_138899248
ES.37739.14	chrX	-	3205	7	NNC	ENSMUSG00000031433.16	novel	3728	8	NA	NA	24	1503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3807355707403	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGAGTTTTGACTTAGT	NA	False	NA	NA	False	NA	NA	NA	138899261	138866826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138869349_138892264_138892337_138894046_138894252_138894660_138894854_138895860_138895978_138896062_138896146_138899248
ES.37739.15	chrX	-	3008	5	ISM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	-5	21928	1	1417	5prime_fragment	FALSE	canonical	3	21	junction_4	5.67890834580027	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTCTTGTAATGTT	NA	False	NA	NA	False	AATACA	-41	NA	138899305	138866912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.16	chrX	-	2405	5	ISM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	-4	22530	2	815	5prime_fragment	FALSE	canonical	3	21	junction_4	5.67890834580027	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTCTCCATTTTCT	NA	False	NA	NA	False	NA	NA	NA	138899304	138867514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.2	chrX	-	5561	8	FSM	ENSMUSG00000031433.16	ENSMUST00000113011.9	3728	8	13	-1846	-2	1846	multi-exon	TRUE	canonical	0	0	junction_3	12.2291054623044	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGGAAAGAGATTCATT	NA	False	NA	NA	False	AATAAA	-22	NA	138899293	138842275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138892264_138892337_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.3	chrX	-	5498	7	FSM	ENSMUSG00000031433.16	ENSMUST00000033810.8	2787	7	-4	-2707	2	1844	multi-exon	FALSE	canonical	3	17	junction_1	6.26276474268531	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTTGGAAAGAGATTCA	NA	False	NA	NA	False	AATAAA	-20	NA	138899304	138842277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.5	chrX	-	5051	6	NIC	ENSMUSG00000031433.16	novel	2787	7	NA	NA	22	1842	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.273548794053	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGATTTGGAAAGAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	138899263	138842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138846653_138855655_138855804_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ES.37739.7	chrX	-	5433	7	NIC	ENSMUSG00000031433.16	novel	2787	7	NA	NA	-2	1842	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	10.6249183003395	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGATTTGGAAAGAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	138899302	138842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138846653_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895921_138895978_138899248
ES.37739.8	chrX	-	5544	8	FSM	ENSMUSG00000031433.16	ENSMUST00000113007.8	3691	8	21	-1874	15	1842	multi-exon	FALSE	canonical	0	0	junction_6	13.2849462143573	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGATTTGGAAAGAGATT	NA	False	NA	NA	False	AATAAA	-18	NA	138899270	138842279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138897413_138897496_138899248
ES.3774.1	chr10	+	2049	2	Antisense	novelGene_ENSMUSG00000054934.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATGCATTGTAATTTA	6285	False	NA	NA	False	AATAAA	-11	NA	116295673	116298063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116295927_116296267
ES.37740.1	chrX	-	2070	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	16	92	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGGTAGTAAGTTTTA	NA	False	NA	83	True	AATAAA	-17	NA	138963445	138907461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ES.37740.10	chrX	-	1961	10	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-36	-9	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	217.539836000015	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTAAGTGGCTGA	NA	False	NA	-18	True	AATAAA	-7	NA	138963078	138907562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138961523_138961572_138962996
ES.37740.11	chrX	-	1779	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-37	-9	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	235.288533247056	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTAAGTGGCTGA	NA	False	NA	-18	True	AATAAA	-7	NA	138963079	138907562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138962996
ES.37740.13	chrX	-	1904	9	NNC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	1092	-30	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_8	177.914963887246	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAATAAACTGAT	NA	False	NA	-39	True	NA	NA	NA	138961950	138907583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138961856
ES.37740.14	chrX	-	1015	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-23	-870	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTGTGCATGCATTT	NA	False	NA	NA	False	ATTAAA	-40	NA	138963352	138908423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ES.37740.15	chrX	-	1106	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	0	890	0	-890	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTTAATTTTTGATTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	138963317	138908443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
ES.37740.16	chrX	-	5620	2	NIC	ENSMUSG00000072944.12	novel	365	4	NA	NA	-1	1231	intron_retention	FALSE	canonical	3	238	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	138963330	138934307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138939905_138963307
ES.37740.2	chrX	-	1955	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-68	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	170.821864452417	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963110	138907552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138962996
ES.37740.3	chrX	-	2017	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	-20	-1	-8	1	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963337	138907552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
ES.37740.4	chrX	-	2012	8	NNC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-11	1	intron_retention	FALSE	non_canonical	0	0	junction_4	205.244702136503	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963340	138907552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928640_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ES.37740.6	chrX	-	1867	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	199.257704124737	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGAACTGGGTTTT	NA	False	NA	-8	True	AATAAA	-17	NA	138963468	138907552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ES.37740.7	chrX	-	1857	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	213.3546439186	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963313	138907553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
ES.37740.8	chrX	-	1892	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	-39	-9	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTAAGTGGCTGA	NA	False	NA	-18	True	AATAAA	-7	NA	138963368	138907562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
ES.37740.9	chrX	-	2010	10	NNC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	219.249280303449	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTAAGTGGCTGA	NA	False	NA	-18	True	AATAAA	-7	NA	138963029	138907562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138961523_138961572_138962898
ES.37741.1	chrX	-	161	1	Intergenic	novelGene_30916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAACAATAAA	NA	False	NA	NA	False	NA	NA	NA	139256677	139256516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139256500_139256700
ES.37742.1	chrX	-	161	1	Intergenic	novelGene_30917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	139330219	139330058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139330100_139330200
ES.37743.1	chrX	+	170	1	Intergenic	novelGene_30918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACACAACTTT	NA	False	NA	NA	False	NA	NA	NA	139348183	139348353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_139348200_139348400
ES.37744.1	chrX	-	169	1	Intergenic	novelGene_30919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAAAGTTTTTCT	9014	False	NA	NA	False	NA	NA	NA	139348707	139348538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139348500_139348700
ES.37745.1	chrX	+	1978	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	-9	-4	-9	4	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTACTGTCATATCTG	NA	False	NA	31	True	AATAAA	-23	NA	139357352	139376893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ES.37745.12	chrX	+	5064	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	12	-2	intron_retention	FALSE	canonical	0	0	junction_2	995.595076100498	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGGGTGTACTGTCA	NA	False	NA	25	True	AATAAA	-17	NA	139357373	139376887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357613_139365979_139366164_139367296_139367373_139368420_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.15	chrX	+	4153	6	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	12	-837	intron_retention	FALSE	canonical	3	1771	junction_5	204.066263747833	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTCTTGGTATTGGT	NA	False	NA	18	True	AATAAA	-14	NA	139357373	139376052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.16	chrX	+	4948	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	811.161444404805	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	False	NA	26	True	AATAAA	-18	NA	139357374	139376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139371887_139371926_139372920_139374527_139374688_139375917
ES.37745.17	chrX	+	7564	19	Fusion	ENSMUSG00000000266.12_ENSMUSG00000031432.4	novel	5916	9	NA	NA	15	-4	multi-exon	FALSE	canonical	0	0	junction_6	971.912161668944	723	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTGTTGGTTGTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	139357376	139668460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139401693_139401863_139429552_139429707_139507920_139508030_139578744_139579461_139593815_139593912_139636872_139637083_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651715_139661933_139662096_139663663_139663872_139664227
ES.37745.18	chrX	+	1930	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	779.417303716907	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGGGTGTACTGTCA	NA	False	NA	25	True	AATAAA	-17	NA	139357376	139376887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357613_139365997_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ES.37745.19	chrX	+	4751	5	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	8617	-1	intron_retention	FALSE	canonical	3	1771	junction_4	188.245019854444	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	False	NA	26	True	AATAAA	-18	NA	139365978	139376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.2	chrX	+	3203	6	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	-9	1	-9	-1	intron_retention	FALSE	canonical	3	2005	junction_4	133.743635362585	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	False	NA	26	True	AATAAA	-18	NA	139357352	139376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527
ES.37745.20	chrX	+	204	1	Intergenic	novelGene_30923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTAGCTTCTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	139410452	139410656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_139410500_139410700
ES.37745.21	chrX	+	2698	9	NIC	ENSMUSG00000000266.12	novel	6271	10	NA	NA	161	47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.992156741649222	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCATGTATTGAGTTA	1788	False	NA	NA	False	ATTAAA	-10	NA	139565508	139664791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139566028_139578744_139579461_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651715_139661933_139662096_139663663_139663872_139664227
ES.37745.22	chrX	+	4936	10	NIC	ENSMUSG00000000266.12	novel	6271	10	NA	NA	-18	-1353	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGACTGTGATGTCC	1966	False	NA	NA	False	AAGAAA	-16	NA	139565686	139667111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139566028_139578744_139579461_139593815_139593912_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651715_139661933_139662096_139663663_139663872_139664227
ES.37745.3	chrX	+	1837	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	718.530541375166	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	False	NA	26	True	AATAAA	-18	NA	139357353	139376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357478_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ES.37745.4	chrX	+	4277	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	-7	-834	intron_retention	FALSE	canonical	2	7	junction_1	958.3316086941	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGGTATTGGTGAG	NA	False	NA	21	True	AATAAA	-17	NA	139357354	139376055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357613_139361130_139361233_139365979_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.5	chrX	+	1130	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	4	831	4	-831	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTATTGGTGAGTTG	NA	False	NA	24	True	AATAAA	-20	NA	139357365	139376058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ES.37745.6	chrX	+	6890	6	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_2	853.210876630156	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	False	NA	26	True	AATAAA	-18	NA	139357368	139376888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_139357613_139365979_139366959_139367319_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.7	chrX	+	4991	6	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	12	1	intron_retention	FALSE	canonical	3	1771	junction_5	204.066263747833	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTGTACTGTCATAT	NA	False	NA	28	True	AATAAA	-20	NA	139357373	139376890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
ES.37745.8	chrX	+	4207	6	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	12	-3	intron_retention	FALSE	canonical	3	1771	junction_5	191.428315564861	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTTGGGTGTACTGTC	NA	False	NA	24	True	AATAAA	-16	NA	139357373	139376886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139357613_139365979_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ES.37746.1	chrX	-	174	1	Intergenic	novelGene_30920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	139385300	139385126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139385100_139385300
ES.37747.1	chrX	-	134	1	Intergenic	novelGene_30921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	139386338	139386204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139386200_139386300
ES.37748.1	chrX	-	168	1	Intergenic	novelGene_30922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAAGAT	NA	False	NA	NA	False	NA	NA	NA	139389080	139388912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139388900_139389100
ES.37749.1	chrX	-	2096	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	520	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.378864479921	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139500888	139440276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500855
ES.37749.2	chrX	-	2407	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1438	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	117.748319167055	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139499970	139440276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499626
ES.37749.3	chrX	-	2021	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	-47	0	-47	0	multi-exon	FALSE	canonical	3	154	junction_2	61	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443983	139440276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139441857_139442853_139442906_139443594
ES.37749.4	chrX	-	2134	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1180	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	110.816164083685	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	139500228	139440285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500148
ES.37749.5	chrX	-	1824	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	-43	9	-43	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	139443460	139440285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139441857_139442853_139442906_139443259
ES.37749.6	chrX	-	2267	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1530	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_3	116.499880782009	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	139499878	139440285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139499665
ES.37749.7	chrX	-	1754	2	NIC	ENSMUSG00000031431.14	novel	1790	3	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	139443442	139440285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_139441857_139443259
ES.37749.8	chrX	-	2231	4	NNC	ENSMUSG00000031431.14	novel	1552	4	NA	NA	1170	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	116.190456674471	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	139500238	139440285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139441857_139442853_139442906_139498876_139499308_139500061
ES.37749.9	chrX	-	1237	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	3	734	3	0	multi-exon	FALSE	canonical	3	154	junction_2	61	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATCGTTTTTCTATA	NA	False	NA	NA	False	TATAAA	-17	NA	139443933	139441010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139441857_139442853_139442906_139443594
ES.3775.1	chr10	-	1096	3	FSM	ENSMUSG00000054934.11	ENSMUST00000068233.11	1367	3	265	6	-178	-6	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATTTCCTTTTTATGC	NA	False	NA	NA	False	ATTAAA	-17	NA	116309518	116253771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116254312_116282231_116282360_116309090
ES.3775.2	chr10	-	1763	2	FSM	ENSMUSG00000054934.11	ENSMUST00000087965.5	1626	2	-131	-6	-118	6	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTAGTGATAGTTGCCTC	NA	False	NA	NA	False	NA	NA	NA	116309458	116298544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116299940_116309090
ES.37750.1	chrX	-	175	1	Intergenic	novelGene_30924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAACATTTATCCTGC	NA	False	NA	NA	False	NA	NA	NA	139530209	139530034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139530000_139530200
ES.37751.1	chrX	-	163	1	Intergenic	novelGene_30925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAGTAGATATTAG	NA	False	NA	NA	False	NA	NA	NA	139534785	139534622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139534600_139534800
ES.37752.1	chrX	-	180	1	Intergenic	novelGene_30926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGCTATGTGCCAT	NA	False	NA	NA	False	NA	NA	NA	139657826	139657646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_139657600_139657800
ES.37753.1	chrX	-	4601	4	NNC	ENSMUSG00000042386.8	novel	2116	4	NA	NA	-54	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAGTTCTTCTTTAAGGA	269	False	NA	NA	False	NA	NA	NA	139714236	139709046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139710457_139710749_139713214_139713260_139713872_139714120
ES.37753.2	chrX	-	2144	4	FSM	ENSMUSG00000042386.8	ENSMUST00000044179.8	2116	4	-32	4	-32	-4	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTTGAAAAGGCTAGT	291	False	NA	NA	False	NA	NA	NA	139714214	139709059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139710457_139710749_139710918_139713386_139713872_139714120
ES.37753.3	chrX	-	4640	3	NIC	ENSMUSG00000042386.8	novel	2116	4	NA	NA	-63	-8	intron_retention	FALSE	canonical	2	3	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTTGAGTTTGAAAAGGC	260	False	NA	NA	False	NA	NA	NA	139714245	139709063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_139710457_139710749_139713872_139714120
ES.37754.1	chrX	-	2943	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-21	-1492	18	1492	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	NA	False	NA	NA	False	NA	NA	NA	139857459	139847685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.10	chrX	-	859	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	18	513	18	-513	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTGTGGCTGTCCTG	NA	False	NA	-3	True	ATTAAA	-19	NA	139857459	139849690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.11	chrX	-	940	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-23	513	16	-513	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTGTGGCTGTCCTG	NA	False	NA	-3	True	ATTAAA	-19	NA	139857461	139849690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.13	chrX	-	3766	4	NIC	ENSMUSG00000031429.15	novel	1430	5	NA	NA	-13	-514	intron_retention	FALSE	canonical	3	586	junction_2	14.8996644257513	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGTTGTGGCTGTCCT	NA	False	NA	-4	True	ATTAAA	-18	NA	139857451	139849691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.14	chrX	-	867	6	NNC	ENSMUSG00000031429.15	novel	1430	5	NA	NA	-7	-515	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.882755809704	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTTGTGGCTGTCC	NA	False	NA	-5	True	ATTAAA	-17	NA	139857445	139849692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_139849839_139849893_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.2	chrX	-	1479	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-41	-8	-2	8	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTCATTCAAGTCAGT	NA	False	NA	0	True	AATAAA	-19	NA	139857479	139849169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.4	chrX	-	4001	4	ISM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	46	-2	7	2	intron_retention	FALSE	canonical	3	80	junction_1	245.906938133559	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	-6	True	AATAAA	-13	NA	139857431	139849175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548
ES.37754.5	chrX	-	4087	4	ISM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	-2	0	2	intron_retention	FALSE	canonical	3	522	junction_1	39.2031744746377	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAATTTCTCATTCAA	NA	False	NA	-6	True	AATAAA	-13	NA	139857438	139849175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548
ES.37754.6	chrX	-	1372	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	18	0	18	0	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	-8	True	AATAAA	-11	NA	139857459	139849177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.7	chrX	-	1353	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	-36	113	3	-113	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTGTCAAACTTAT	NA	False	NA	NA	False	AATAAA	-30	NA	139857474	139849290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.8	chrX	-	1242	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	18	130	18	-130	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCACCTTGTGTTGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	139857459	139849307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ES.37754.9	chrX	-	3184	4	ISM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	350	511	311	-511	3prime_fragment	FALSE	canonical	3	80	junction_1	245.906938133559	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTGTGGCTGTCCTGTC	NA	False	NA	-1	True	ATTAAA	-21	NA	139857127	139849688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548
ES.37755.1	chrX	+	2123	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	2	77	2	-2	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTTGGTTGAGAACTA	NA	False	NA	NA	False	AATAAA	-14	NA	139857657	139947189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ES.37755.2	chrX	+	4439	12	NIC	ENSMUSG00000079418.6	novel	2202	13	NA	NA	11	-55	intron_retention	FALSE	canonical	2	18	junction_1	12.7946269714612	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTAAAGCATTGATTTT	NA	False	NA	NA	False	NA	NA	NA	139857666	139947136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139945572_139946236
ES.37755.3	chrX	+	1650	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	33	519	-5	296	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCTTGTTAAATTAT	NA	False	NA	NA	False	AATAAA	-43	NA	139857688	139946747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ES.37755.6	chrX	+	2012	12	ISM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	29370	127	6391	-52	3prime_fragment	FALSE	canonical	3	41	junction_1	8.34781111509018	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGCATTGATTTTTGT	NA	False	NA	NA	False	NA	NA	NA	139887025	139947139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ES.37755.7	chrX	+	4461	9	NIC	ENSMUSG00000079418.6	novel	2091	12	NA	NA	10018	-50	intron_retention	FALSE	canonical	3	41	junction_7	7.15454401062709	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCATTGATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	139890652	139947141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139945572_139946236
ES.37756.1	chrX	-	3341	1	Intergenic	novelGene_30927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCTAACCGAATCCAAGAA	NA	False	NA	NA	False	NA	NA	NA	140609985	140606644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_140606600_140610000
ES.37757.1	chrX	+	2544	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	-7	-5	-7	5	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTCTTTCTTAAGGTT	NA	False	NA	16	True	AATAAA	-27	NA	141009758	141022693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ES.37757.2	chrX	+	2443	4	NIC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	108.812785196512	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAAGTCTTTCTTAAGG	NA	False	NA	14	True	AATAAA	-25	NA	141009770	141022691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_141009928_141011286_141011378_141019779_141019925_141020641
ES.37757.3	chrX	+	2501	5	NNC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.252598724518	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTTTCTCAAGTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	141009779	141022684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141009915_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ES.37757.5	chrX	+	2455	5	FSM	ENSMUSG00000042271.14	ENSMUST00000042329.12	2447	5	-6	-2	-6	2	multi-exon	FALSE	canonical	3	12	junction_1	115.070358911407	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAAGTCTTTCTTAAG	NA	False	NA	13	True	AATAAA	-24	NA	141010926	141022690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141011010_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ES.37757.6	chrX	+	2520	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	-31	-5	-31	5	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTCTTTCTTAAGGTT	NA	False	NA	16	True	AATAAA	-27	NA	141011141	141022693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
ES.37758.1	chrX	+	345	1	Intergenic	novelGene_30928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAGAATAGGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	141081888	141082233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_141081900_141082200
ES.37759.1	chrX	+	180	1	Intergenic	novelGene_30929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTCAAATGAC	NA	False	NA	NA	False	NA	NA	NA	141167171	141167351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_141167200_141167400
ES.3776.1	chr10	+	3372	1	Intergenic	novelGene_2866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCACAAAGACAAACAAAAA	566	False	NA	NA	False	NA	NA	NA	116347953	116351325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116348000_116351300
ES.3776.2	chr10	+	5782	1	Antisense	novelGene_ENSMUSG00000020166.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTTTTTGTATTTC	723	False	NA	NA	False	TATAAA	-44	NA	116348110	116353892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116348100_116353900
ES.37760.1	chrX	-	5393	16	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	1	141	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_14	43.7267271433235	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTGAATTCAGAACTA	NA	False	NA	NA	False	CATAAA	-19	NA	141173499	141100847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143378_141143433_141173300
ES.37760.10	chrX	-	5057	14	NIC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	63.3401636512012	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173497	141100988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141131997_141132108_141133955_141134134_141134374_141134905_141173300
ES.37760.11	chrX	-	4806	17	NNC	ENSMUSG00000031278.13	novel	4959	16	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.5583428958552	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173415	141100988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141102656_141102723_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.15	chrX	-	5005	16	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	45.5960037235234	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGTTTGTTTTTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	141173505	141100990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134658_141143382_141143433_141173300
ES.37760.16	chrX	-	5251	16	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.230533440814	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGTTTGTTTTTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	141173510	141100990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124336_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.17	chrX	-	5015	17	NNC	ENSMUSG00000031278.13	novel	4959	16	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.7721668137635	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGTTTGTTTTTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	141173479	141100990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141104775_141104855_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.19	chrX	-	5005	17	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.7921850745194	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	141173320	141100993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141102724_141102782_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.2	chrX	-	5058	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	-46	-53	-15	53	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACCTAGGCTTTTTAAG	NA	False	NA	50	True	TATAAA	-21	NA	141173546	141100935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.20	chrX	-	7052	1	NIC	ENSMUSG00000031278.13	novel	5137	16	NA	NA	2976	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	False	NA	-8	True	AATAAA	-13	NA	141108045	141100993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141101000_141108000
ES.37760.21	chrX	-	4855	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	29	396	-2	-396	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGTAGACTGAAGGT	NA	False	NA	NA	False	NA	NA	NA	141173502	141101384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.22	chrX	-	4344	16	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	-84	-1024	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	43.7267271433235	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGAGTATTCTCATGC	NA	False	NA	NA	False	AATAAA	-27	NA	141173615	141102012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143378_141143433_141173300
ES.37760.23	chrX	-	4170	15	NIC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	0	-1029	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	47.1781794079095	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATATGTGAGTATTCT	NA	False	NA	NA	False	AATAAA	-22	NA	141173500	141102017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141173300
ES.37760.24	chrX	-	3920	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	8	1031	8	-1031	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTATATGTGAGTATT	NA	False	NA	NA	False	AATAAA	-20	NA	141173492	141102019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.26	chrX	-	3235	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	7	1717	7	961	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCTGTTGCTGATTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	141173493	141102705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.27	chrX	-	3443	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	114	1723	-77	955	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTCTGCTTGCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	141173417	141102711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.28	chrX	-	2708	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	32	2540	1	138	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGAGTCTACTTTAACT	NA	False	NA	NA	False	AATAAA	-22	NA	141173499	141103528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.29	chrX	-	2483	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	-68	2544	-37	134	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTGAGTCTACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	141173568	141103532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.3	chrX	-	5368	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	-84	-4	-84	4	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTCTTATATGT	NA	False	NA	1	True	AATAAA	-22	NA	141173615	141100984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.30	chrX	-	2227	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	68	2664	68	14	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCACAGGAGGTGGCCT	NA	False	NA	NA	False	AATAAA	-20	NA	141173432	141103652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ES.37760.31	chrX	-	2554	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	56	2670	25	8	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCATTTGCACAGGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	141173475	141103658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ES.37760.5	chrX	-	7996	14	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	35440	-1	-26879	1	3prime_fragment	FALSE	canonical	3	142	junction_4	16.6786544659004	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGTTTTTTCTTATA	NA	False	NA	-2	True	AATAAA	-19	NA	141137900	141100987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374
ES.37760.7	chrX	-	5198	16	NNC	ENSMUSG00000031278.13	novel	5280	16	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	45.5960037235234	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173456	141100988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143389_141143433_141173300
ES.37760.8	chrX	-	4458	4	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	56810	0	-5509	0	3prime_fragment	FALSE	canonical	3	168	junction_1	8.17856276425687	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141116530	141100988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187
ES.37760.9	chrX	-	3989	10	NIC	ENSMUSG00000031278.13	novel	5137	16	NA	NA	-17421	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	57.4535776105102	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141128442	141100988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141126069_141126194_141126302_141126454_141128423
ES.37761.1	chrX	-	179	1	Intergenic	novelGene_30930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCAGACCA	NA	False	NA	NA	False	NA	NA	NA	141254669	141254490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141254500_141254700
ES.37762.1	chrX	-	175	1	Intergenic	novelGene_30931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGTTTTTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	141418841	141418666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141418700_141418800
ES.37763.1	chrX	+	4910	5	NNC	ENSMUSG00000047045.18	novel	441	3	NA	NA	-296	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.851101977404	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGCCTTGCTTCTCA	NA	False	NA	11	True	ATTAAA	-20	NA	141464105	141621373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141464125_141465427_141465946_141588985_141589065_141615496_141615598_141617180
ES.37763.10	chrX	+	4559	5	NNC	ENSMUSG00000047045.18	novel	4443	5	NA	NA	2	130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.9218138692896	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCAGGAGTCCTGGCCT	NA	False	NA	2	True	ATTAAA	-11	NA	141464403	141621364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141464522_141553952_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.11	chrX	+	4450	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	-5	-2	4	2	multi-exon	FALSE	canonical	0	0	junction_1	49.9218138692896	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAGCATTTTGAATCTT	NA	False	NA	10	True	AATAAA	-17	NA	141464405	141621236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.12	chrX	+	4539	7	NNC	ENSMUSG00000047045.18	novel	5149	7	NA	NA	1	25616	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	43.1496105299792	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAACAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	141464411	141652106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180_141621236_141652060
ES.37763.13	chrX	+	3469	1	NIC	ENSMUSG00000047045.18	novel	1742	7	NA	NA	-1	-86405	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTCCCCGAGGAA	NA	False	NA	NA	False	NA	NA	NA	141464412	141467881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_141464400_141467900
ES.37763.14	chrX	+	4423	5	ISM	ENSMUSG00000047045.18	ENSMUST00000112891.8	1654	6	3	5244	0	12	5prime_fragment	FALSE	canonical	0	0	junction_3	48.4632592795821	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATCTTAGCCTCAGGT	NA	False	NA	20	True	AATAAA	-27	NA	141464413	141621246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141615496_141615598_141617180
ES.37763.15	chrX	+	4501	4	NIC	ENSMUSG00000047045.18	novel	4443	5	NA	NA	1	129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.7073019704764	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCAGGAGTCCTGGCC	NA	False	NA	1	True	ATTAAA	-10	NA	141464414	141621363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_141464553_141588985_141589065_141615496_141615598_141617180
ES.37763.16	chrX	+	4372	4	NIC	ENSMUSG00000047045.18	novel	4443	5	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.7073019704764	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTAGCATTTTGAATCT	NA	False	NA	9	True	AATAAA	-16	NA	141464415	141621235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_141464553_141588985_141589065_141615496_141615598_141617180
ES.37763.17	chrX	+	4523	5	NIC	ENSMUSG00000047045.18	novel	5149	7	NA	NA	2	136	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.7411193566576	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTCCTGGCCTTGCTTC	NA	False	NA	8	True	ATTAAA	-17	NA	141464415	141621370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141617180
ES.37763.19	chrX	+	4883	7	NNC	ENSMUSG00000047045.18	novel	5149	7	NA	NA	15	129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.5223960403302	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCAGGAGTCCTGGCC	NA	False	NA	1	True	ATTAAA	-10	NA	141464428	141621363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141464553_141465666_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.2	chrX	+	4674	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	-38	5122	-38	134	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGAGTCCTGGCCTTGCT	NA	False	NA	6	True	ATTAAA	-15	NA	141464363	141621368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.20	chrX	+	5258	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	99	-133	99	133	multi-exon	FALSE	canonical	2	8	junction_1	44.5474154381848	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGAGTCCTGGCCTTGC	NA	False	NA	5	True	ATTAAA	-14	NA	141464820	141621367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.21	chrX	+	5061	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	166	-3	166	3	multi-exon	FALSE	canonical	2	8	junction_1	44.5474154381848	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGCATTTTGAATCTTA	NA	False	NA	11	True	AATAAA	-18	NA	141464887	141621237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.22	chrX	+	2999	1	Intergenic	novelGene_30932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAAAATTATATATG	NA	False	NA	NA	False	AATAAA	-7	NA	141522268	141525267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_141522300_141525300
ES.37763.23	chrX	+	4487	5	ISM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	70309	-131	-18958	131	3prime_fragment	FALSE	canonical	3	106	junction_3	6.81909084849293	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGAGTCCTGGCCTT	NA	False	NA	3	True	ATTAAA	-12	NA	141535030	141621365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.3	chrX	+	3649	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	-32	6141	-32	-885	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGTGTCAACAGTGGA	NA	False	NA	NA	False	NA	NA	NA	141464369	141620349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.4	chrX	+	5329	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-44	-136	-32	136	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTCCTGGCCTTGCTTC	NA	False	NA	8	True	ATTAAA	-17	NA	141464369	141621370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.5	chrX	+	2777	2	ISM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-43	153353	-31	-86405	5prime_fragment	FALSE	canonical	3	35	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTCCCCGAGGAA	NA	False	NA	NA	False	NA	NA	NA	141464370	141467881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141464553_141465286
ES.37763.6	chrX	+	4599	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	-24	-132	-15	132	multi-exon	FALSE	canonical	0	0	junction_1	49.9218138692896	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGAGTCCTGGCCTTG	NA	False	NA	4	True	ATTAAA	-13	NA	141464386	141621366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.7	chrX	+	5343	8	NNC	ENSMUSG00000047045.18	novel	5149	7	NA	NA	-12	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	50.0905302875683	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGAGTCCTGGCCTT	NA	False	NA	3	True	ATTAAA	-12	NA	141464389	141621365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_141464553_141465286_141465946_141535035_141535086_141550996_141551036_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.8	chrX	+	5188	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	-23	-16	-11	16	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTAGCCTCAGGTGTTT	NA	False	NA	24	True	AATAAA	-31	NA	141464390	141621250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37763.9	chrX	+	4529	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	-4	5233	-4	23	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGGTGTTTCTGCTGT	NA	False	NA	31	True	AATAAA	-38	NA	141464397	141621257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ES.37764.1	chrX	+	3547	1	Intergenic	novelGene_30936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTCATCCCCTCCC	NA	False	NA	NA	False	ATTAAA	-10	NA	141739431	141742978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_141739400_141743000
ES.37765.1	chrX	-	4005	1	Intergenic	novelGene_30933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAACAAAAA	NA	False	NA	NA	False	AATACA	-15	NA	141546716	141542711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141542700_141546700
ES.37766.1	chrX	-	183	1	Intergenic	novelGene_30934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTCCCATCTTCA	NA	False	NA	NA	False	NA	NA	NA	141577966	141577783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141577800_141578000
ES.37767.1	chrX	-	4127	1	Genic_Genomic	ENSMUSG00000042225.4	novel	NA	NA	NA	NA	113103	1647	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGCTATAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	141636621	141632494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_141632500_141636600
ES.37767.10	chrX	-	3097	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	4	2336	4	-2336	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGAAAGGGGAGAAA	NA	False	NA	8	True	NA	NA	NA	141749720	141636477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ES.37767.11	chrX	-	7210	2	Intergenic	novelGene_30935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGAGGTGCCGATAGC	8045	False	NA	NA	False	NA	NA	NA	141717143	141707433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141713589_141716088
ES.37767.12	chrX	-	1922	1	NIC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	4	-113657	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTGTATTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	141749720	141747798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141747800_141749700
ES.37767.2	chrX	-	5622	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	-184	-1	-184	1	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTTTAGATTTCTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	141749908	141634140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ES.37767.4	chrX	-	5171	7	NNC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	193	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	32.5955859315678	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTAGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	141749531	141634141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203_141749432_141749504
ES.37767.5	chrX	-	5334	7	NNC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.5955859315678	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTAGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	141749720	141634141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141636972_141637070_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ES.37767.6	chrX	-	5324	5	NIC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	38.5810834477209	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTAGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	141749722	141634141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141749203
ES.37767.7	chrX	-	7252	5	NIC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	8	-5	intron_retention	FALSE	canonical	3	81	junction_4	5.43139024560011	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTTTGTTTTAGATT	NA	False	NA	NA	False	AATAAA	-10	NA	141749716	141634146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ES.37767.8	chrX	-	5141	7	NNC	ENSMUSG00000042225.4	novel	5437	6	NA	NA	8	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	32.5955859315678	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCTTTGTTTTAGATT	NA	False	NA	NA	False	AATAAA	-10	NA	141749716	141634146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203_141749333_141749615
ES.37767.9	chrX	-	3836	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	8	1593	8	-1593	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTCTAGCCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	141749716	141635734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ES.37768.1	chrX	-	115	1	Intergenic	novelGene_30937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	141827774	141827659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_141827700_141827800
ES.37769.1	chrX	-	177	1	Intergenic	novelGene_30938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	142271171	142270994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_142271000_142271200
ES.3777.1	chr10	+	5948	1	Antisense	novelGene_ENSMUSG00000020166.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAAAAAAACAACA	4629	False	NA	NA	False	NA	NA	NA	116382260	116388208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116382300_116388200
ES.3777.2	chr10	+	6718	1	Antisense	novelGene_ENSMUSG00000020166.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGCAATAAAGAACCCAAG	4629	False	NA	NA	False	AATATA	-11	NA	116382260	116388978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116382300_116389000
ES.37770.1	chrX	-	3539	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	18	4	18	-4	multi-exon	FALSE	canonical	3	10	junction_3	5.06348584365444	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGTCTTGACTAGTTA	NA	False	NA	NA	False	AATAAA	-18	NA	142610392	142585230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
ES.37771.1	chrX	+	169	1	Intergenic	novelGene_30939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	143026557	143026726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143026600_143026700
ES.37772.1	chrX	-	174	1	Intergenic	novelGene_30940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCAGGAGGAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	143029802	143029628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143029600_143029800
ES.37773.1	chrX	+	178	1	Intergenic	novelGene_30941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGATTATGAAA	NA	False	NA	NA	False	NA	NA	NA	143030337	143030515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143030300_143030500
ES.37774.1	chrX	+	158	1	Intergenic	novelGene_30942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	143036988	143037146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143037000_143037100
ES.37775.1	chrX	+	175	1	Intergenic	novelGene_30943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAGAGATGAG	NA	False	NA	NA	False	NA	NA	NA	143040340	143040515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143040300_143040500
ES.37776.1	chrX	+	4198	28	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-48912	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	326.283503343617	1437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143051887	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143051930_143068016_143068208_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.10	chrX	+	4195	27	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-96	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	278.43943813702	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGTTTTCTTTTTGCA	NA	False	NA	17	True	AATAAA	-27	NA	143100899	143157448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138659_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.101	chrX	+	4021	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	334.973512982743	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101068	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121961_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135766_143136545_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.102	chrX	+	5175	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	51	0	intron_retention	FALSE	canonical	3	128	junction_20	271.432004990814	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101069	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.103	chrX	+	5800	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	52	0	intron_retention	FALSE	canonical	3	548	junction_3	192.692775162952	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101070	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.106	chrX	+	4110	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	53	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	305.253468448763	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143101071	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135759_143136546_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.107	chrX	+	7260	22	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	57	2	intron_retention	FALSE	non_canonical	0	0	junction_13	409.240876792746	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143101075	143157443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133528_143134258_143134373_143134767_143134910_143135625_143135751_143136545_143136625_143139908_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.108	chrX	+	3995	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	283.560719423548	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101078	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147107_143152527_143152858_143156543
ES.37776.109	chrX	+	3990	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	278.43943813702	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101078	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138633_143139789_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.11	chrX	+	4036	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	315.703415249186	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143100961	143157443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139908_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.110	chrX	+	4939	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	514	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	266.028941901053	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGCCAAAATGAGTGG	NA	False	NA	2	True	AATAAA	-12	NA	143101532	143157433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102520_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.111	chrX	+	4145	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1425	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	265.728787415926	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102443	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102520_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.112	chrX	+	3797	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1472	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	340.160064624314	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATGAGTGGAGTTTT	NA	False	NA	8	True	AATAAA	-18	NA	143102490	143157439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102520_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.113	chrX	+	4106	27	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1501	0	combination_of_known_junctions	FALSE	canonical	1	36	junction_1	260.660111614689	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102519	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143102661_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.114	chrX	+	1570	4	NIC	ENSMUSG00000041718.17	novel	604	5	NA	NA	1541	-15	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	345.844859245684	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATAATAGTGTGACT	NA	False	NA	NA	False	AATAAA	-4	NA	143102559	143108178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143102661_143102894_143103058_143105007_143105147_143107011
ES.37776.115	chrX	+	4128	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1625	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	264.979356123449	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102643	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102703_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.116	chrX	+	4052	26	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1632	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	323.817049582013	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102650	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102703_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.117	chrX	+	4014	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1635	0	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	255.804300661045	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102653	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102703_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.118	chrX	+	3377	3	NNC	ENSMUSG00000041718.17	novel	1802	4	NA	NA	1651	-5	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	391.5	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGACTTGGCTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	143102669	143108188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102703_143102894_143103058_143105007
ES.37776.119	chrX	+	354	3	NNC	ENSMUSG00000041718.17	novel	1802	4	NA	NA	1656	-1736	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	374	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTTCATTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	143102674	143105281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102696_143102998_143103058_143105007
ES.37776.12	chrX	+	4215	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_23	297.599120775567	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100962	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.120	chrX	+	4798	26	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1658	1807	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	250.123796548829	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGTTTGTTTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	143102676	143154574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102696_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ES.37776.121	chrX	+	2216	3	NNC	ENSMUSG00000041718.17	novel	1802	4	NA	NA	1660	-6	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	360.5	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCCCTAAGTCCAGT	NA	False	NA	7	True	AATAAA	-14	NA	143102678	143107140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102703_143102998_143103058_143105007
ES.37776.122	chrX	+	3903	26	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1662	-3	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_1	319.545517258496	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAATGAGTGGAGTTT	NA	False	NA	7	True	AATAAA	-17	NA	143102680	143157438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143102696_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.123	chrX	+	4122	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1677	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	274.699520183216	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143102695	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.124	chrX	+	4182	25	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1685	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_21	319.040390598641	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102703	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.125	chrX	+	4244	26	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	1701	0	1701	0	3prime_fragment	FALSE	canonical	3	548	junction_2	169.540668867384	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102719	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.126	chrX	+	3837	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1749	-2	combination_of_known_splicesites	FALSE	canonical	1	10	junction_2	255.634613375332	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATGAGTGGAGTTTT	NA	False	NA	8	True	AATAAA	-18	NA	143102767	143157439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143103058_143105007_143105147_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.127	chrX	+	4002	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1934	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_14	252.455778305825	1407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102952	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.128	chrX	+	3919	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1979	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	274.371070586897	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102997	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.129	chrX	+	3904	25	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	3985	6	3985	-1	3prime_fragment	FALSE	canonical	3	548	junction_1	162.149745391584	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143105003	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.13	chrX	+	4218	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	303.130962089845	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100962	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105013_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.130	chrX	+	3864	24	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	3996	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	268.228699360603	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143105014	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135726_143136544_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.131	chrX	+	3645	24	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	4011	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	342.717859457202	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143105029	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136474_143136568_143136625_143138579_143138649_143139791_143139958_143150894_143150936_143152556_143152858_143156543
ES.37776.132	chrX	+	6459	1	Intergenic	novelGene_30955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTTATTTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	143108314	143114773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143108300_143114800
ES.37776.133	chrX	+	5599	2	Intergenic	novelGene_30956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTGTGTATGT	NA	False	NA	NA	False	NA	NA	NA	143108964	143114775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143109654_143109865
ES.37776.134	chrX	+	4717	2	Intergenic	novelGene_30957	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTGTGTATGT	NA	False	NA	NA	False	NA	NA	NA	143109764	143114775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143114392_143114685
ES.37776.135	chrX	+	6059	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	15797	0	-2049	0	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143116815	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.136	chrX	+	7647	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-1290	0	intron_retention	FALSE	canonical	3	128	junction_16	248.77532031936	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143117574	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.137	chrX	+	3947	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-145	1	combination_of_known_junctions	TRUE	canonical	3	134	junction_1	227.828696459765	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGAGTTTTCTTTTTGC	NA	False	NA	16	True	AATAAA	-26	NA	143118719	143157447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.138	chrX	+	3815	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-82	1	combination_of_known_junctions	FALSE	canonical	3	128	junction_19	302.220546917654	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGAGTTTTCTTTTTGC	NA	False	NA	16	True	AATAAA	-26	NA	143118782	143157447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.139	chrX	+	3990	26	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-78	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	366.577323903157	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143118786	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123023_143123141_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.14	chrX	+	4155	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	299.952273536975	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100962	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.140	chrX	+	3805	24	NIC	ENSMUSG00000041718.17	novel	2608	14	NA	NA	-59	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	317.106274636735	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118805	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.141	chrX	+	3847	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-59	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	306.015428873012	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118805	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.142	chrX	+	3564	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-59	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	319.956193835242	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143118805	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.143	chrX	+	5856	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-58	0	intron_retention	FALSE	canonical	3	957	junction_20	120.94713174642	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.144	chrX	+	3648	23	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	375.011338671555	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.145	chrX	+	4803	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	1	intron_retention	FALSE	canonical	3	134	junction_1	232.688990611088	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118806	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.147	chrX	+	3708	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	422.627493502125	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118806	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139908_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.148	chrX	+	3872	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	312.505463841123	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118806	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121941_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.149	chrX	+	3861	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	310.402866463096	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135759_143136545_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.15	chrX	+	4049	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	266.015115360011	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100964	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.150	chrX	+	3562	22	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	2	combination_of_known_junctions	FALSE	canonical	3	89	junction_10	320.268084982727	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143118806	143157443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.151	chrX	+	5090	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	intron_retention	FALSE	canonical	3	134	junction_1	232.182926058569	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.152	chrX	+	4569	21	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-58	-3909	intron_retention	FALSE	canonical	3	126	junction_12	233.213528767094	1294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTCACACTTGTTT	NA	False	NA	NA	False	AATAAA	-45	NA	143118806	143148858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860
ES.37776.153	chrX	+	3850	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_21	300.537804980043	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.154	chrX	+	3470	21	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_10	382.22970842152	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118827	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.155	chrX	+	5625	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-36	0	intron_retention	FALSE	canonical	3	134	junction_1	232.386850732124	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118828	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.157	chrX	+	3830	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	310.402866463096	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118828	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135759_143136554_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.159	chrX	+	6725	22	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-31	1	intron_retention	FALSE	canonical	0	0	junction_11	331.739509315391	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118833	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132420_143133278_143133526_143134258_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.16	chrX	+	3884	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	256.744632296408	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGGAGTTTTCTTT	NA	False	NA	12	True	AATAAA	-22	NA	143100974	143157443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.160	chrX	+	3693	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	313.174846331885	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118833	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132420_143133416_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.161	chrX	+	3655	23	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	377.483470712503	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118833	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133532_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.162	chrX	+	3316	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-26	-497	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_13	296.46392592523	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAGACATATTACTT	NA	False	NA	NA	False	AGTAAA	-11	NA	143118838	143156944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.163	chrX	+	3606	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	250.72190215899	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118838	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.164	chrX	+	3739	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_13	354.959008789191	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143118842	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.165	chrX	+	3808	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_13	296.46392592523	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118843	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.166	chrX	+	4613	23	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_1	261.300719699932	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118843	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.167	chrX	+	3724	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	318.382288551854	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118852	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.168	chrX	+	3412	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-8	-323	combination_of_known_junctions	FALSE	canonical	3	128	junction_19	302.220546917654	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTATACATCTTAATTA	NA	False	NA	NA	False	AATACA	-12	NA	143118856	143157118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.169	chrX	+	4506	24	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	317.947660088521	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118867	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143118899_143119107_143119460_143120084_143120172_143121959_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.17	chrX	+	4101	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	273.57837926269	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100974	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135759_143136554_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.170	chrX	+	4055	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	10	264	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	227.828696459765	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGTTAAGTATTGAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	143118874	143157710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.171	chrX	+	3291	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	13	-492	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	227.828696459765	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATATTACTTTTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	143118877	143156949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.172	chrX	+	3675	21	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	28	1	intron_retention	FALSE	canonical	0	0	junction_9	273.802935521152	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118892	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.173	chrX	+	3670	21	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_17	333.253578375387	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118901	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.174	chrX	+	3964	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_20	240.782687204597	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118901	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.175	chrX	+	3904	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118901	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.176	chrX	+	4238	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17885	-267	39	267	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAAGTATTGAGTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	143118903	143157713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.179	chrX	+	3963	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	256.650115261061	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118915	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132420_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.18	chrX	+	4015	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	282.405507028457	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100983	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.180	chrX	+	4152	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	52	263	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGTTAAGTATTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	143118916	143157709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.181	chrX	+	3873	25	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	386.365379656643	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAATGAGTGGAGTTT	NA	False	NA	7	True	AATAAA	-17	NA	143118916	143157438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139908_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.182	chrX	+	3949	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_14	246.7729951861	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118916	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.183	chrX	+	3994	25	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	52	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_21	327.406281650015	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118916	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.184	chrX	+	3761	23	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	261.30731804297	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118927	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139908_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.186	chrX	+	3816	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	85	-3	combination_of_known_splicesites	FALSE	canonical	3	29	junction_10	256.590216602657	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAATGAGTGGAGTTT	NA	False	NA	7	True	AATAAA	-17	NA	143118949	143157438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.187	chrX	+	3842	23	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_19	314.367842655491	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118949	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.189	chrX	+	3767	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	394.977374863503	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118957	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139908_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.19	chrX	+	4138	28	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_24	332.947459779973	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100984	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.190	chrX	+	5079	22	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	0	intron_retention	FALSE	canonical	3	128	junction_17	242.567203208848	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118957	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.192	chrX	+	3771	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_14	260.396931593809	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118957	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.193	chrX	+	3623	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	256.607774628907	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118957	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.194	chrX	+	3908	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_12	234.116082883364	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118957	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.196	chrX	+	3888	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_20	307.941245961114	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143118963	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.197	chrX	+	3930	25	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	101	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_21	373.760318976837	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCCAAAATGAGTGGAGT	NA	False	NA	5	True	AATAAA	-15	NA	143118965	143157436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.198	chrX	+	3407	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17947	502	101	-497	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAGACATATTACTT	NA	False	NA	NA	False	AGTAAA	-11	NA	143118965	143156944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.199	chrX	+	3887	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	101	1	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_14	313.555324303169	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143118965	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.2	chrX	+	429	3	Intergenic	novelGene_30944	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	143051891	143094552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143051930_143068016_143068208_143094352
ES.37776.20	chrX	+	3696	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	-22	494	1	-489	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATTACTTTTTGTTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	143100996	143156952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.200	chrX	+	3717	22	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	335.241619299659	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118965	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.201	chrX	+	3813	23	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	114	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	327.404670372642	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATGAGTGGAGTTTT	NA	False	NA	8	True	AATAAA	-18	NA	143118978	143157439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127326_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.202	chrX	+	4010	25	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	117	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	329.107663488207	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118981	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123023_143123141_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.204	chrX	+	3325	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	119	-492	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACATATTACTTTTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	143118983	143156949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.206	chrX	+	4672	23	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17997	2873	151	1806	internal_fragment	FALSE	canonical	3	957	junction_21	93.51975307322	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGTTTGTTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	143119015	143154573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ES.37776.207	chrX	+	4585	22	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	169	1806	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	227.387987924064	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGTTTGTTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	143119033	143154573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ES.37776.208	chrX	+	7704	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	185	0	intron_retention	FALSE	canonical	3	957	junction_18	121.903404382322	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119049	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143122011_143122720_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.209	chrX	+	3829	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	194	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	242.194012123559	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119058	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156530
ES.37776.21	chrX	+	1174	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	197	431	1	-431	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTTGTGATCCTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	143100996	143107762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ES.37776.210	chrX	+	3433	20	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	214	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	337.215352417142	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119078	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.211	chrX	+	3740	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	219	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	260.600058510868	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143119083	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.213	chrX	+	6147	22	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	237	0	intron_retention	FALSE	canonical	3	957	junction_19	115.957533864186	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119101	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.215	chrX	+	3614	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	275	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	254.947305426873	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143119139	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139908_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.216	chrX	+	2983	23	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	18173	4386	-298	293	internal_fragment	FALSE	canonical	3	957	junction_21	93.51975307322	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTCTTTGTCTTTGC	NA	False	NA	NA	False	NA	NA	NA	143119191	143153060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ES.37776.217	chrX	+	4495	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-297	9742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	242.194012123559	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATGTACAGGGATTTT	NA	False	NA	NA	False	NA	NA	NA	143119192	143167188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143165472
ES.37776.219	chrX	+	6890	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-91	0	intron_retention	FALSE	canonical	3	957	junction_18	121.541597817373	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119398	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143119460_143120087_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143132416_143133278_143133526_143134258_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.22	chrX	+	1605	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	197	0	1	0	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	143100996	143108193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ES.37776.220	chrX	+	3715	22	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	229	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_17	243.044055056717	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143119718	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.221	chrX	+	3412	23	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	19067	5	596	0	3prime_fragment	FALSE	canonical	3	957	junction_20	119.790795601097	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143120085	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.222	chrX	+	5069	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-1069	0	intron_retention	FALSE	canonical	3	957	junction_18	124.198832522693	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143120931	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.223	chrX	+	5168	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-964	0	intron_retention	FALSE	canonical	2	7	junction_17	407.115029813442	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143121036	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143122720_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.224	chrX	+	6290	19	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-941	0	intron_retention	FALSE	canonical	3	957	junction_16	128.818671006962	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143121059	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143122720_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.225	chrX	+	3643	20	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-474	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	348.823205662789	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143121526	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.226	chrX	+	7515	21	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-434	0	intron_retention	FALSE	canonical	3	964	junction_17	120.012197296775	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143121566	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143150936_143152556_143152858_143156543
ES.37776.227	chrX	+	3709	22	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-427	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	268.050507982977	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143121573	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138581_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.228	chrX	+	3702	22	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-426	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_10	244.530240560862	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143121574	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.229	chrX	+	3747	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-426	-4	combination_of_known_junctions	FALSE	canonical	2	7	junction_19	341.205216841712	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAAAATGAGTGGAGTT	NA	False	NA	6	True	AATAAA	-16	NA	143121574	143157437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.23	chrX	+	4071	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	278.486316895866	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143100996	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125402_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.230	chrX	+	3473	23	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-422	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	343.690363722497	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143121578	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143121725_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132420_143133281_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.231	chrX	+	3633	21	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-399	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	340.333057459895	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143121601	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143122011_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.232	chrX	+	3377	23	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-377	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.967933814632	1343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143121623	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143121674_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.233	chrX	+	3074	19	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	1986	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	285.766378077454	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143125417	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143125474_143125642_143125790_143127300_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.234	chrX	+	2913	17	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	26235	5	-2477	0	3prime_fragment	FALSE	canonical	3	957	junction_14	133.440998197705	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143127253	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.235	chrX	+	2837	16	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	27587	4	-1125	1	3prime_fragment	FALSE	canonical	3	957	junction_13	137.453992302879	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143128605	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.236	chrX	+	2768	16	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-55	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_12	403.375832471682	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143129675	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.237	chrX	+	6523	14	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-55	0	intron_retention	FALSE	canonical	3	964	junction_10	139.359226758906	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143129675	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143150936_143152556_143152858_143156543
ES.37776.238	chrX	+	2673	15	NNC	ENSMUSG00000041718.17	novel	3307	22	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	321.677689177048	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143129711	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136607_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.239	chrX	+	2381	12	NNC	ENSMUSG00000041718.17	novel	2608	14	NA	NA	2665	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	448.851887072925	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143132395	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143132405_143133269_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.24	chrX	+	4593	24	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	-3912	intron_retention	FALSE	canonical	3	548	junction_3	180.818335136017	1359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTGCTTCACACTTG	NA	False	NA	NA	False	AATAAA	-42	NA	143100996	143148855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860
ES.37776.240	chrX	+	2439	12	ISM	ENSMUSG00000041718.17	ENSMUST00000149427.8	2996	19	11271	4	3541	1	3prime_fragment	FALSE	canonical	3	957	junction_9	153.19522466286	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143133271	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.241	chrX	+	5479	10	NIC	ENSMUSG00000041718.17	novel	2608	14	NA	NA	3603	0	intron_retention	FALSE	canonical	3	957	junction_7	152.429056560587	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143133333	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.242	chrX	+	5335	8	NIC	ENSMUSG00000041718.17	novel	2608	14	NA	NA	4875	0	intron_retention	FALSE	canonical	3	957	junction_5	149.56453797745	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143134605	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143134910_143135625_143135747_143136436_143136470_143136568_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.243	chrX	+	100	3	ISM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	5989	20838	-4154	7960	internal_fragment	FALSE	canonical	3	1270	junction_1	14	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACAGCAAACCTGGTAG	NA	False	NA	NA	False	NA	NA	NA	143135719	143136608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143135747_143136436_143136470_143136568
ES.37776.244	chrX	+	5664	4	NIC	ENSMUSG00000041718.17	novel	2608	14	NA	NA	-305	1	intron_retention	FALSE	canonical	3	1092	junction_2	158.17922324587	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143139568	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143139958_143146860_143150936_143152556_143152858_143156543
ES.37776.245	chrX	+	4737	4	ISM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	13877	4	3734	1	3prime_fragment	FALSE	canonical	3	957	junction_1	216.21028858241	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143143607	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.246	chrX	+	5579	3	ISM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	16721	4	6578	1	intron_retention	FALSE	canonical	3	957	junction_1	67.5	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143146451	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143147104_143150894_143150936_143152556
ES.37776.247	chrX	+	2190	2	ISM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	21836	4	11693	1	3prime_fragment	FALSE	canonical	3	1468	junction_1	0	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143151566	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143152858_143156543
ES.37776.25	chrX	+	4055	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	315.702432046381	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATGAGTGGAGTTTT	NA	False	NA	8	True	AATAAA	-18	NA	143100996	143157439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.26	chrX	+	4139	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	358.36540011558	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100996	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121941_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.28	chrX	+	3894	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	283.940652954099	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143100998	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139908_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.29	chrX	+	3332	20	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	319.585621593159	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143100998	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143133301_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.3	chrX	+	158	1	Intergenic	novelGene_30946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACATTTTTCTTAA	NA	False	NA	NA	False	NA	NA	NA	143054867	143055025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143054900_143055000
ES.37776.32	chrX	+	4085	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	278.654037267015	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143100998	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134252_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.33	chrX	+	4450	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	-18	-264	2	264	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGTTAAGTATTGAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	143101000	143157710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.34	chrX	+	4152	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	2	7	junction_23	398.052777045469	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101001	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.36	chrX	+	4253	28	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	333.589272113382	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143101004	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121006_143121187_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.37	chrX	+	4133	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	307.720017982996	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAAAATGAGTGGAGTT	NA	False	NA	6	True	AATAAA	-16	NA	143101004	143157437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135665_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.4	chrX	+	178	1	Antisense	novelGene_ENSMUSG00000083200.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGGTAATGATAGT	NA	False	NA	NA	False	NA	NA	NA	143069710	143069888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_143069700_143069900
ES.37776.40	chrX	+	3896	28	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_24	370.062071685093	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101005	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143147931_143147972_143150894_143150936_143152556_143152858_143156543
ES.37776.43	chrX	+	4083	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	357.425469713617	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143101005	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.44	chrX	+	439	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	7	33	7	-6	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCCCTAAGTCCAGT	NA	False	NA	7	True	AATAAA	-14	NA	143101005	143107140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
ES.37776.45	chrX	+	4062	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	270.766466332042	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAAAATGAGTGGAGTT	NA	False	NA	6	True	AATAAA	-16	NA	143101005	143157437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105013_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.46	chrX	+	4068	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_15	261.342494455617	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101005	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.47	chrX	+	3846	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	311.270019674123	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101006	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.48	chrX	+	1475	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	9	-1005	-6	-15	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATAATAGTGTGACT	NA	False	NA	NA	False	AATAAA	-4	NA	143101007	143108178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
ES.37776.5	chrX	+	229	1	Intergenic	novelGene_30949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATCAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	143072851	143073080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143072900_143073100
ES.37776.50	chrX	+	4065	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_17	271.280995829462	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101008	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.52	chrX	+	6483	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-2	2642	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	311.270019674123	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTTATTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	143101011	143160088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.53	chrX	+	4326	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-1	263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	278.648216219603	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGTTAAGTATTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	143101012	143157709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131050_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.54	chrX	+	3950	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	286.931999299873	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101012	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.55	chrX	+	3953	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.172156725314	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101012	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.56	chrX	+	3872	25	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	251.253686401922	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101012	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.57	chrX	+	3780	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	317.208862423483	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101012	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.59	chrX	+	3877	24	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_12	315.221241355798	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101015	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.6	chrX	+	246	1	Intergenic	novelGene_30952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAACAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	143077958	143078204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143078000_143078200
ES.37776.60	chrX	+	530	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	219	1053	0	-6	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCCCTAAGTCCAGT	NA	False	NA	7	True	AATAAA	-14	NA	143101018	143107140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ES.37776.62	chrX	+	3521	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	1798	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	295.527892435047	1387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGACTTGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	143101018	143154565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143154309
ES.37776.63	chrX	+	4084	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	313.997187248549	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.64	chrX	+	6182	24	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	1	intron_retention	FALSE	canonical	3	128	junction_19	275.650178294792	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101019	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143129743_143130955_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.66	chrX	+	3835	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	321.812491988736	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101019	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135751_143136546_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.67	chrX	+	4187	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	381.46863698857	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101020	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143105003_143105147_143119107_143119460_143120087_143120172_143121006_143121187_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.68	chrX	+	4088	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_22	348.502166420813	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101020	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.69	chrX	+	3849	24	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	372.822540229042	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGAGTGGAGTTTTCT	NA	False	NA	10	True	AATAAA	-20	NA	143101020	143157441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.71	chrX	+	4157	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_17	303.21508223483	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101020	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.72	chrX	+	4162	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	305.253468448763	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101020	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135766_143136554_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.73	chrX	+	3952	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_13	329.97358924617	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101020	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.75	chrX	+	4049	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_23	265.342095255903	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101024	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.76	chrX	+	3953	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	6	1	combination_of_known_splicesites	FALSE	canonical	3	29	junction_13	279.705942732721	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101024	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.77	chrX	+	4047	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	278.43943813702	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGCCAAAATGAGTG	NA	False	NA	1	True	AATAAA	-11	NA	143101024	143157432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138659_143139798_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.8	chrX	+	4391	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	-223	0	-4	0	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100795	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.82	chrX	+	3989	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	20	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	280.85402899015	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101038	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.83	chrX	+	4048	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	21	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	264.075567452659	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTGCCAAAATGAGT	NA	False	NA	0	True	AATAAA	-10	NA	143101039	143157431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156523
ES.37776.86	chrX	+	4296	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	24	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	329.59905713084	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTGGTTAAGTATTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	143101042	143157707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136474_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.87	chrX	+	4577	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	25	1527	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	269.074163754159	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTCACTTACAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	143101043	143154294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132420_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556
ES.37776.88	chrX	+	4163	28	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	334.057316652888	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101044	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123023_143123149_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.89	chrX	+	4050	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	295.799070716401	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101044	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102894_143103058_143105007_143105055_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.9	chrX	+	4287	27	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100795	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.90	chrX	+	3871	25	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	288.006064268716	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101045	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.91	chrX	+	4300	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	27	263	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGTTAAGTATTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	143101045	143157709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.92	chrX	+	3542	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	28	-489	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATTACTTTTTGTTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	143101046	143156952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.93	chrX	+	5985	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	30	1	intron_retention	FALSE	canonical	3	548	junction_3	193.194310475231	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTGGAGTTTTCTT	NA	False	NA	11	True	AATAAA	-21	NA	143101048	143157442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.94	chrX	+	4128	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	30	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	356.554642401065	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101048	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127264_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136468_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.95	chrX	+	3740	24	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_12	280.986992547869	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101048	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.96	chrX	+	3956	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_15	319.322898646495	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101048	143157446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37776.97	chrX	+	2256	3	ISM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	54	34	34	-7	intron_retention	FALSE	canonical	3	607	junction_1	91.5	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACCCCTAAGTCCAG	NA	False	NA	6	True	AATAAA	-13	NA	143101052	143107139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_143101118_143102998_143103058_143105007
ES.37776.99	chrX	+	3890	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	340.994284513694	1408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATGAGTGGAGTTTTC	NA	False	NA	9	True	AATAAA	-19	NA	143101060	143157440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ES.37777.1	chrX	-	159	1	Intergenic	novelGene_30945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	143052687	143052528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143052500_143052700
ES.37778.1	chrX	-	177	1	Intergenic	novelGene_30947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACGAAGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	143063152	143062975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143063000_143063200
ES.37779.1	chrX	-	180	1	Intergenic	novelGene_30948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTATGGTC	NA	False	NA	NA	False	NA	NA	NA	143072079	143071899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143071900_143072100
ES.3778.1	chr10	+	1950	1	FSM	ENSMUSG00000052291.9	ENSMUST00000218139.2	2235	1	282	3	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTCGCACCGAAAACT	NA	False	NA	NA	False	AATAAA	-32	NA	116417467	116419417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_116417500_116419400
ES.3778.2	chr10	+	686	2	FSM	ENSMUSG00000052291.9	ENSMUST00000219273.2	676	2	-12	2	-12	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTCGCACCGAAAACT	NA	False	NA	NA	False	AATAAA	-32	NA	116417468	116419417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_116417628_116418890
ES.37780.1	chrX	-	98	1	Intergenic	novelGene_30950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAATAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	143076122	143076024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143076000_143076100
ES.37781.1	chrX	-	181	1	Intergenic	novelGene_30951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	143076700	143076519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143076500_143076700
ES.37782.1	chrX	-	175	1	Intergenic	novelGene_30953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGATAAGGAAGATAA	NA	False	NA	NA	False	NA	NA	NA	143093073	143092898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143092900_143093100
ES.37783.1	chrX	-	2296	2	Intergenic	novelGene_30954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTTTTTGACCAGT	NA	False	NA	NA	False	NA	NA	NA	143098119	143095779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143096644_143096687
ES.37783.2	chrX	-	3504	1	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTAAGCATTTACTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	143100953	143097449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_143097400_143101000
ES.37784.1	chrX	-	3395	1	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCACAGGAGAACCGTA	NA	False	NA	NA	False	AATGAA	-30	NA	143123061	143119666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_143119700_143123100
ES.37785.1	chrX	-	4565	4	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143136350	143124253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_143125472_143125640_143125809_143128609_143128713_143133274
ES.37785.2	chrX	-	176	1	Intergenic	novelGene_30958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAGAACAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	143127887	143127711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143127700_143127900
ES.37786.1	chrX	-	9232	1	Antisense	novelGene_ENSMUSG00000041718.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGAAGCAATGATAG	NA	False	NA	NA	False	NA	NA	NA	143158107	143148875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_143148900_143158100
ES.37787.1	chrX	-	162	1	Intergenic	novelGene_30959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	143173070	143172908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143172900_143173100
ES.37788.1	chrX	-	2290	1	Intergenic	novelGene_30960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTAGGCATTATATAT	280	False	NA	NA	False	NA	NA	NA	143182822	143180532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143180500_143182800
ES.37789.1	chrX	-	183	1	Intergenic	novelGene_30961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	143192677	143192494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_143192500_143192700
ES.3779.1	chr10	-	5630	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	333	junction_12	72.9339027247731	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGCTTTGATTTGAA	NA	False	NA	-1	True	AATAAA	-23	NA	116417392	116321065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334364_116335246_116335372_116337096_116337223_116339939_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.10	chr10	-	3362	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-620	-622	-620	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116418036	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ES.3779.11	chr10	-	3103	14	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-557	0	intron_retention	FALSE	canonical	0	0	junction_13	147.720910691822	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417973	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116417357
ES.3779.12	chr10	-	7539	1	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	6775	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116328608	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116321100_116328600
ES.3779.13	chr10	-	4222	14	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-347	0	intron_retention	FALSE	canonical	3	50	junction_12	171.039425885088	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417763	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
ES.3779.14	chr10	-	3028	16	NNC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-346	0	intron_retention	FALSE	canonical	0	0	junction_2	226.287035029014	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417762	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328291_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ES.3779.15	chr10	-	3418	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	-729	4	-729	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116418145	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ES.3779.16	chr10	-	5406	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	333	junction_13	71.8326457405186	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417402	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.17	chr10	-	3066	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-397	0	intron_retention	FALSE	canonical	2	21	junction_14	137.285268320964	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417813	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116417357
ES.3779.18	chr10	-	5869	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-314	0	intron_retention	FALSE	canonical	3	333	junction_13	72.3942199137685	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417730	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.19	chr10	-	3498	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-628	0	intron_retention	FALSE	canonical	3	100	junction_15	145.637593339598	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116418044	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.2	chr10	-	3233	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-428	-5	-417	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGCTTTGATTTGAA	NA	False	NA	-1	True	AATAAA	-23	NA	116417833	116321065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.20	chr10	-	3188	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-388	0	intron_retention	FALSE	canonical	3	93	junction_16	168.781466973569	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417804	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ES.3779.21	chr10	-	2796	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-395	0	intron_retention	FALSE	canonical	3	67	junction_9	144.203246804255	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417811	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.22	chr10	-	2895	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	333	junction_14	67.9142992367316	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417404	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.23	chr10	-	3078	14	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-690	0	intron_retention	FALSE	canonical	3	67	junction_9	210.858319184306	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116418106	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ES.3779.25	chr10	-	5753	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-323	0	intron_retention	FALSE	canonical	3	50	junction_11	176.346250314545	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417739	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334364_116335246_116335372_116337096_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
ES.3779.26	chr10	-	2719	16	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	169.392509345078	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417400	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384943_116385011_116417357
ES.3779.27	chr10	-	2607	14	FSM	ENSMUSG00000020166.16	ENSMUST00000105265.8	2268	14	4	-343	-1	0	multi-exon	FALSE	canonical	3	10	junction_12	150.969411847597	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417402	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385081_116417357
ES.3779.28	chr10	-	3320	17	NNC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-356	0	intron_retention	FALSE	canonical	3	7	junction_15	181.769600043572	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417772	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373349_116384937_116385011_116417357
ES.3779.29	chr10	-	2786	16	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	187.385805225476	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417400	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.3	chr10	-	3460	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	212	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	222.62704467429	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGGCTTTGATTTGA	NA	False	NA	-2	True	AATAAA	-22	NA	116417121	116321066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116373125_116373354_116384937_116385011_116416385
ES.3779.30	chr10	-	2897	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-346	0	intron_retention	FALSE	canonical	3	10	junction_12	179.961337070596	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417762	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385011_116417357
ES.3779.31	chr10	-	2471	11	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-337	0	intron_retention	FALSE	canonical	0	0	junction_10	211.587428738099	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417753	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116417357
ES.3779.32	chr10	-	4146	4	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	3046	0	intron_retention	FALSE	canonical	3	572	junction_2	7.07106781186548	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116332337	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864
ES.3779.33	chr10	-	3344	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	233	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	179.325322887124	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417100	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116416385
ES.3779.34	chr10	-	2938	16	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-15053	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	137.740077279232	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116400121	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116399935
ES.3779.35	chr10	-	2573	12	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-338	0	intron_retention	FALSE	canonical	0	0	junction_9	207.572311406916	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417754	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353263_116353289_116384937_116385081_116417357
ES.3779.36	chr10	-	4113	16	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	100	junction_14	148.97107847573	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417404	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.37	chr10	-	2272	13	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	219.935770295683	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417401	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116353221_116353289_116384937_116385011_116417357
ES.3779.38	chr10	-	3932	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	50	junction_12	140.720210043877	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417404	116321070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ES.3779.39	chr10	-	4084	10	NNC	ENSMUSG00000020166.16	novel	2618	14	NA	NA	-3930	-1	intron_retention	TRUE	non_canonical	0	0	junction_8	232.347653525413	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCAGTGTTGGCTTTGA	NA	False	NA	-7	True	AATAAA	-17	NA	116339313	116321071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334364_116335246_116335372_116337096_116337370_116337426_116337589_116337640
ES.3779.40	chr10	-	2263	12	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	195.151138715993	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417404	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116384937_116385081_116417357
ES.3779.41	chr10	-	3053	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-597	-2	intron_retention	FALSE	canonical	3	67	junction_9	191.95456809625	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116418013	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.42	chr10	-	3708	16	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	135.18425286335	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417343	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116416385
ES.3779.43	chr10	-	2462	13	NIC	ENSMUSG00000020166.16	novel	2268	14	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	153.296734762646	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417402	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116417357
ES.3779.46	chr10	-	9402	13	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	-2	intron_retention	TRUE	non_canonical	0	0	junction_8	159.28433695753	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417401	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337332_116337439_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.47	chr10	-	3369	17	NNC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-337	-2	intron_retention	FALSE	canonical	3	7	junction_15	161.051816195906	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCAGTGTTGGCTTTG	NA	False	NA	-8	True	AATAAA	-16	NA	116417753	116321072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373349_116384937_116385081_116417357
ES.3779.49	chr10	-	2600	15	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	50	junction_13	166.140093331637	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCAGTGTTGGCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	116417401	116321073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
ES.3779.5	chr10	-	2558	11	NIC	ENSMUSG00000020166.16	novel	2268	14	NA	NA	-346	1	intron_retention	FALSE	canonical	2	5	junction_9	173.471063869453	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTTGGCTTTGATTT	NA	False	NA	-4	True	AATAAA	-20	NA	116417762	116321068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116384937_116385081_116417357
ES.3779.51	chr10	-	4905	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	-5	intron_retention	FALSE	canonical	3	333	junction_14	69.9322193707768	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCACTGCAGTGTTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	116417401	116321075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.52	chr10	-	7579	17	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	1	-5	intron_retention	TRUE	non_canonical	0	0	junction_7	228.878234207078	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCACTGCAGTGTTGGCT	NA	False	NA	-11	True	AATAAA	-13	NA	116417404	116321075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116334951_116335017_116335246_116335372_116337096_116337370_116337426_116337532_116337585_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.53	chr10	-	2780	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-339	-321	-339	43	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCCCTGCTGTACCTC	NA	False	NA	34	True	NA	NA	NA	116417755	116321370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ES.3779.54	chr10	-	3192	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	232	9	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	179.737384379961	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATTATATATATGACA	NA	False	NA	0	True	AATAAA	-21	NA	116417101	116321404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116416385
ES.3779.55	chr10	-	2859	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-400	3	intron_retention	FALSE	canonical	3	93	junction_16	168.781466973569	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATATATTATATAT	NA	False	NA	-6	True	AATAAA	-15	NA	116417816	116321410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ES.3779.56	chr10	-	2174	14	NIC	ENSMUSG00000020166.16	novel	2120	16	NA	NA	9	3	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	179.961337070596	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATATATTATATAT	NA	False	NA	-6	True	AATAAA	-15	NA	116417379	116321410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385011_116417357
ES.3779.57	chr10	-	2819	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-359	340	-348	3	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTATATATTATATAT	NA	False	NA	-6	True	AATAAA	-15	NA	116417764	116321410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.58	chr10	-	2726	15	NIC	ENSMUSG00000020166.16	novel	2120	16	NA	NA	-449	2	intron_retention	FALSE	canonical	3	50	junction_13	166.140093331637	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGTATATATTATATA	NA	False	NA	-7	True	AATAAA	-14	NA	116417865	116321411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
ES.3779.59	chr10	-	3099	16	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	260	2	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	135.18425286335	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGTATATATTATATA	NA	False	NA	-7	True	AATAAA	-14	NA	116417073	116321411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116416385
ES.3779.6	chr10	-	3664	17	NNC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	261	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	191.838107202401	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTTGGCTTTGATTT	NA	False	NA	-4	True	AATAAA	-20	NA	116417072	116321068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373349_116384937_116385081_116416385
ES.3779.61	chr10	-	1972	13	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	176.289278523177	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGTGTATATATTATA	NA	False	NA	-9	True	AATAAA	-12	NA	116417401	116321413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ES.3779.62	chr10	-	2221	12	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-313	-6	intron_retention	FALSE	canonical	2	21	junction_11	197.548529449357	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTACGAATGTGTATAT	NA	False	NA	-15	True	AATAAA	-6	NA	116417729	116321419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116417357
ES.3779.63	chr10	-	2334	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	3	-36	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	145.213635723371	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGGACATCACATGA	NA	False	NA	-45	True	AATAAA	-17	NA	116417385	116321449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116363731_116363855_116384937_116385081_116417357
ES.3779.64	chr10	-	2133	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	-36	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	195.194356308511	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGGACATCACATGA	NA	False	NA	-45	True	AATAAA	-17	NA	116417390	116321449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.65	chr10	-	2594	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	-336	10	intron_retention	FALSE	canonical	3	100	junction_15	145.637593339598	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCCTTCTCGTATTTCA	NA	False	NA	-2	True	AATAAA	-29	NA	116417752	116321681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
ES.3779.66	chr10	-	2601	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-412	611	-401	10	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCCTTCTCGTATTTCA	NA	False	NA	-2	True	AATAAA	-29	NA	116417817	116321681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.67	chr10	-	1991	15	NIC	ENSMUSG00000020166.16	novel	2120	16	NA	NA	1	10	combination_of_known_junctions	FALSE	canonical	3	50	junction_13	166.140093331637	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCCTTCTCGTATTTCA	NA	False	NA	-2	True	AATAAA	-29	NA	116417400	116321681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385011_116417357
ES.3779.68	chr10	-	2415	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	-338	616	-338	10	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCCTTCTCGTATTTCA	NA	False	NA	-2	True	AATAAA	-29	NA	116417754	116321681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ES.3779.69	chr10	-	2668	17	NNC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-317	8	intron_retention	FALSE	canonical	3	7	junction_15	181.769600043572	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATCCTTCTCGTATTT	NA	False	NA	-4	True	AATAAA	-27	NA	116417733	116321683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373349_116384937_116385011_116417357
ES.3779.7	chr10	-	3359	16	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	272	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	137.972783145405	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417061	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116416385
ES.3779.70	chr10	-	1987	2	ISM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	55390	617	5705	5	intron_retention	FALSE	canonical	3	587	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGATCCTTCTCGTA	NA	False	NA	-7	True	AATAAA	-24	NA	116329678	116321686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_116322192_116328196
ES.3779.71	chr10	-	2373	17	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	181.993303448231	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGATCCTTCTCGTA	NA	False	NA	-7	True	AATAAA	-24	NA	116417357	116321686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417178
ES.3779.72	chr10	-	1689	12	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	167.602392535044	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGATCCTTCTCGTA	NA	False	NA	-7	True	AATAAA	-24	NA	116417384	116321686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116363727_116363855_116384937_116385081_116417357
ES.3779.73	chr10	-	2551	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	-373	0	intron_retention	FALSE	canonical	3	93	junction_16	168.781466973569	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417789	116321691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385011_116417357
ES.3779.74	chr10	-	2292	14	NIC	ENSMUSG00000020166.16	novel	2120	16	NA	NA	-363	-1	intron_retention	FALSE	canonical	3	10	junction_12	179.961337070596	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGTGAAGATCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	116417779	116321692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385011_116417357
ES.3779.75	chr10	-	2465	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	-346	1	-346	-1	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGTGAAGATCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	116417762	116321692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ES.3779.76	chr10	-	1662	12	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	195.151138715993	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGTGAAGATCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	116417423	116321692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116384937_116385081_116417357
ES.3779.78	chr10	-	1911	14	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	147.720910691822	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGTGAAGATCCTT	NA	False	NA	-13	True	AATAAA	-18	NA	116417404	116321692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116417357
ES.3779.79	chr10	-	1719	13	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	198.733682069469	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTATGTGAAGATCCT	NA	False	NA	-14	True	AATAAA	-17	NA	116417401	116321693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116353221_116353289_116384937_116385081_116417357
ES.3779.8	chr10	-	9494	13	NNC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_7	200.821282487689	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417396	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116322192_116328196_116329699_116330727_116330778_116330864_116330927_116333990_116334364_116335246_116335372_116337096_116337353_116337406_116337586_116337640_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.80	chr10	-	1761	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTTATGTGAAGATCC	NA	False	NA	-15	True	AATAAA	-16	NA	116417401	116321694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.81	chr10	-	1418	12	NIC	ENSMUSG00000020166.16	novel	2693	15	NA	NA	-2	196	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	195.151138715993	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGAGCAGGGTCTGAAT	NA	False	NA	NA	False	ACTAAA	-20	NA	116417392	116321905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116384937_116385081_116417357
ES.3779.82	chr10	-	1839	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	12	842	1	194	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGAGCAGGGTCTGA	NA	False	NA	NA	False	ACTAAA	-18	NA	116417404	116321907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ES.3779.83	chr10	-	2974	14	ISM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	-328	7415	-317	5404	5prime_fragment	FALSE	canonical	3	333	junction_13	68.3000688746653	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTTGCTATCTATAAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	116417733	116328485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ES.3779.84	chr10	-	1678	1	FSM	ENSMUSG00002076243.1	ENSMUST00020183487.1	95	1	-1135	-448	-1135	448	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATCCCAGGAATGTGAA	NA	False	NA	NA	False	NA	NA	NA	116368780	116367102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116367100_116368800
ES.3779.85	chr10	-	177	1	Intergenic	novelGene_2867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTGTACAAG	NA	False	NA	NA	False	NA	NA	NA	116402566	116402389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116402400_116402600
ES.3779.9	chr10	-	3788	17	NIC	ENSMUSG00000020166.16	novel	2955	17	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	179.737384379961	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417362	116321069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116416385
ES.37790.1	chrX	+	183	1	Intergenic	novelGene_30962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGAAAAAAAAGAACTC	NA	False	NA	NA	False	NA	NA	NA	143271721	143271904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_143271700_143271900
ES.37791.1	chrX	+	177	1	Intergenic	novelGene_30963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAAGAGATGCCT	8618	False	NA	NA	False	NA	NA	NA	144162358	144162535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_144162400_144162500
ES.37792.1	chrX	-	7653	14	NNC	ENSMUSG00000041688.17	novel	6519	12	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1.64622573531021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGTGGAAAATGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	144288187	144229419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_144233095_144233426_144234300_144235390_144235624_144236347_144236471_144242994_144243186_144244731_144244882_144254413_144254560_144258715_144258809_144259190_144259336_144263000_144263455_144269760_144270698_144272819_144272969_144279984_144280048_144287766
ES.37792.2	chrX	-	6555	12	FSM	ENSMUSG00000041688.17	ENSMUST00000112835.8	6519	12	-37	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_10	1.60061971469627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTGTGTGGAAAATGC	NA	False	NA	NA	False	AATAAA	-19	NA	144288177	144229421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_144233095_144233426_144234300_144235390_144235624_144236347_144236471_144242994_144243186_144244731_144244882_144254413_144254560_144258715_144258809_144259190_144259336_144263000_144263455_144279984_144280048_144287766
ES.37793.1	chrX	-	179	1	Intergenic	novelGene_30964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGAGTTTCCACC	NA	False	NA	NA	False	NA	NA	NA	144375054	144374875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_144374900_144375100
ES.37794.1	chrX	-	4688	21	FSM	ENSMUSG00000031290.15	ENSMUST00000112819.9	4892	21	211	-7	211	0	multi-exon	TRUE	canonical	0	0	junction_17	2.22710574513201	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGCCTGGAACTCATTT	NA	False	NA	NA	False	GATAAA	-16	NA	146336835	146253375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_146256073_146263252_146263331_146263463_146263602_146263779_146263893_146264610_146264669_146267749_146267801_146271229_146271275_146274830_146274948_146275034_146275084_146279762_146279829_146286379_146286488_146291654_146291714_146291814_146291913_146292105_146292218_146292700_146292789_146295048_146295183_146302033_146302171_146302255_146302362_146305508_146305636_146308269_146308415_146336673
ES.37794.2	chrX	-	4348	19	NIC	ENSMUSG00000031290.15	novel	4892	21	NA	NA	-6250	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.38047614284762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTAAGCCTGGAA	NA	False	NA	NA	False	GATAAA	-9	NA	146308309	146253382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_146256073_146263252_146263331_146263463_146263602_146263779_146263893_146264610_146264669_146267749_146267801_146271229_146271275_146274830_146274948_146275034_146275084_146286379_146286488_146291654_146291714_146291814_146291913_146292105_146292218_146292700_146292789_146295048_146295183_146302033_146302171_146302255_146302362_146305508_146305636_146308269
ES.37794.3	chrX	-	1685	17	NNC	ENSMUSG00000031290.15	novel	4930	21	NA	NA	-82	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.33100702487144	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGAGTGGTCCAA	NA	False	NA	NA	False	AATAAA	-10	NA	146302141	146255813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_146256073_146263252_146263331_146263463_146263602_146263779_146263893_146264610_146264669_146267749_146267801_146271229_146271275_146274830_146274948_146275034_146275084_146279762_146279829_146286379_146286488_146291650_146291714_146291814_146291913_146292105_146292218_146292700_146292789_146295048_146295183_146302033
ES.37795.1	chrX	+	2076	7	FSM	ENSMUSG00000095872.8	ENSMUST00000178833.2	1350	7	-126	-600	-126	-1	multi-exon	TRUE	canonical	0	0	junction_3	6.15539510420646	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGTTTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	146572597	146616451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_146572740_146589721_146589848_146590566_146590647_146594315_146595275_146608125_146608208_146609013_146609064_146615814
ES.37795.2	chrX	+	2625	1	Genic_Genomic	ENSMUSG00000095872.8	novel	NA	NA	NA	NA	-92	-40595	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGATCTTTTAACAAAA	NA	False	NA	NA	False	NA	NA	NA	146572631	146575256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_146572600_146575300
ES.37795.3	chrX	+	3157	3	NNC	ENSMUSG00000095872.8	novel	1350	7	NA	NA	-82	169304	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGTTCAGAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	146572641	146785756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_146572740_146579375_146580903_146784224
ES.37795.4	chrX	+	2123	9	NNC	ENSMUSG00000095872.8	novel	1350	7	NA	NA	-78	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.27992834354024	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGTTTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	146572645	146616451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_146572740_146589721_146589848_146590566_146590647_146594315_146595043_146595090_146595275_146608125_146608208_146609013_146609064_146612123_146612267_146615814
ES.37795.5	chrX	+	6055	2	Intergenic	novelGene_30965	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	146765891	146785737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_146765899_146779689
ES.37796.1	chrX	+	2043	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	-16	1	-16	-1	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTGTTTGTGTGTGT	1193	False	NA	NA	False	AATAAA	-18	NA	146963703	147007705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
ES.37797.1	chrX	+	2011	8	NNC	ENSMUSG00000096834.8	novel	2026	7	NA	NA	-34	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.91146098219174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	147446559	147486844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469041_147469088_147469273_147478430_147478513_147479317_147479368_147486208
ES.37797.2	chrX	+	2040	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	-17	3	-17	-3	multi-exon	FALSE	canonical	0	0	junction_1	5.30461015427985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTTTTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	147446576	147486842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
ES.37798.1	chrX	+	2658	1	Genic_Genomic	ENSMUSG00000079387.11	novel	NA	NA	NA	NA	-16	-38922	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGACAAGATCCTTTAAC	NA	False	NA	NA	False	NA	NA	NA	147665555	147668213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_147665600_147668200
ES.37798.2	chrX	+	2034	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	-14	5	-14	-5	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTTCTTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	147665557	147707130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ES.37799.1	chrX	+	2045	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177554.2	2028	7	-18	1	-18	-1	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	147880929	147921147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_147881040_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
ES.37799.2	chrX	+	1032	6	NIC	ENSMUSG00000094885.8	novel	2028	7	NA	NA	33	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.76194411635517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTCTTTTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	147880980	147921144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_147881040_147898081_147898208_147898926_147899007_147912815_147912898_147913703_147913754_147920509
ES.378.1	chr1	+	705	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	-104	-118	-104	118	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	43228211	43228916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43228200_43228900
ES.3780.1	chr10	-	3848	1	Intergenic	novelGene_2868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGGCTATGCATCCAT	NA	False	NA	NA	False	NA	NA	NA	116474358	116470510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116470500_116474400
ES.37800.1	chrX	+	7408	4	NIC	ENSMUSG00000094941.2	novel	2022	7	NA	NA	3830	-1	intron_retention	TRUE	canonical	0	0	junction_1	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	148059202	148087998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_148065841_148079665_148079748_148080553_148080604_148087360
ES.37801.1	chrX	+	2044	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	-17	1	-17	-1	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	148230595	148270779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
ES.37801.2	chrX	+	1487	3	ISM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	31118	3	31118	-3	3prime_fragment	FALSE	canonical	1	1	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTCTTTTTTGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	148261730	148270777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_148262532_148263337_148263388_148270141
ES.37802.1	chrX	+	2017	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	-33	-7	-33	7	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTTTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	148377532	148419767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
ES.37802.2	chrX	+	1972	7	NNC	ENSMUSG00000072923.7	novel	1977	7	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.87839736284947	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTTCTTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	148377551	148419755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419138
ES.37802.3	chrX	+	2830	7	Fusion	ENSMUSG00000094378.8_ENSMUSG00000072923.7	novel	1977	7	NA	NA	-14	-5	intron_retention	TRUE	non_canonical	0	0	junction_1	4.81028989655394	71	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTTCTTTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	148377551	148609685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_148377658_148559800_148559873_148582582_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ES.37802.4	chrX	+	2153	6	NNC	ENSMUSG00000072923.7	novel	1977	7	NA	NA	17676	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.67097875150313	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	148395241	148419754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_148395693_148399354_148400266_148401572_148401602_148411437_148411520_148412325_148412376_148419124
ES.37802.5	chrX	+	2088	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	-60	1	-60	-1	multi-exon	FALSE	canonical	1	1	junction_6	4.6785562825394	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTTGTGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	148567408	148609689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ES.37802.6	chrX	+	2050	1	Intergenic	novelGene_30966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGATCTTTTAACAGAA	NA	False	NA	NA	False	NA	NA	NA	148568033	148570083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148568000_148570100
ES.37803.1	chrX	+	2042	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	-17	1	-17	-1	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	148724633	148767977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
ES.37804.1	chrX	-	1960	1	Intergenic	novelGene_30967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAAACAAAACATGT	NA	False	NA	NA	False	AATAAA	-14	NA	148880292	148878332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_148878300_148880300
ES.37805.1	chrX	+	1049	4	Intergenic	novelGene_30968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	10.2740233382816	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGAATCGTGTTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	148930373	148935549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930450_148930555_148930725_148930848_148930931_148934827
ES.37805.2	chrX	+	5130	1	Intergenic	novelGene_30969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTTTAGTCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	148930426	148935556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930400_148935600
ES.37805.3	chrX	+	7569	2	Intergenic	novelGene_30970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTGGGGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	148930490	148938183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930725_148930848
ES.37805.4	chrX	+	4937	2	Intergenic	novelGene_30971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930493	148935554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930725_148930848
ES.37805.5	chrX	+	4947	2	Intergenic	novelGene_30972	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930494	148935554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930736_148930848
ES.37805.6	chrX	+	1041	3	Intergenic	novelGene_30973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	12	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930495	148935554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_148930725_148930848_148930931_148934824
ES.37806.1	chrX	+	4457	1	Genic_Genomic	ENSMUSG00000081187.2	novel	NA	NA	NA	NA	-959	1067	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGGTCTCGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	149245762	149250219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_149245800_149250200
ES.37807.1	chrX	+	177	1	Intergenic	novelGene_30976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACACACAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	149361761	149361938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149361800_149361900
ES.37808.1	chrX	+	2119	17	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-759	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	29.7066385678353	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149370465	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149370483_149370944_149371084_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.10	chrX	+	2051	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-9	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	17.6227126175286	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTATTTCTTCTTTC	NA	False	NA	10	True	AATAAA	-28	NA	149371242	149426865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.11	chrX	+	2095	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	22.4049597683688	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTATTTCTTCTTTC	NA	False	NA	10	True	AATAAA	-28	NA	149371269	149426865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371410_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.12	chrX	+	2850	18	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.4063729902102	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371290	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372935_149373081_149389760_149390668_149390916_149390993_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.13	chrX	+	2132	15	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	363	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	10.561771651014	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371614	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.14	chrX	+	1976	14	FSM	ENSMUSG00000025271.14	ENSMUST00000112713.3	1872	14	-105	1	-105	-1	multi-exon	FALSE	canonical	0	0	junction_1	22.3556513644536	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149377368	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149377771_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.2	chrX	+	2002	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-82	-1	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	10.2058806577385	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371142	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.3	chrX	+	1999	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	24.3706563081278	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGACAGGAAAAAGTTATT	NA	False	NA	1	True	AATAAA	-19	NA	149371214	149426856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371268_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.4	chrX	+	2000	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	17.7330827049958	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371215	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371410_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.5	chrX	+	2058	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	25.206348406701	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTATTTCTTCTTTC	NA	False	NA	10	True	AATAAA	-28	NA	149371225	149426865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424964_149426164_149426230_149426558
ES.37808.6	chrX	+	1724	15	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	26.0294182079604	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371225	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372935_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.7	chrX	+	1907	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	17.171552702718	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTATTTCTTCTTTC	NA	False	NA	10	True	AATAAA	-28	NA	149371242	149426865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372935_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.8	chrX	+	1893	16	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.8418382639877	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCTTTCATTGTTCT	NA	False	NA	18	True	AATAAA	-36	NA	149371242	149426873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372957_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37808.9	chrX	+	1985	17	NNC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	-9	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.1396129992673	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTCTCTGATGAATAA	NA	False	NA	-38	True	GATAAA	-10	NA	149371242	149426817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149371339_149371940_149372041_149372948_149373081_149390528_149390668_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ES.37809.1	chrX	-	6133	5	Fusion	ENSMUSG00000041353.13_ENSMUSG00000087360.3	novel	842	2	NA	NA	2	4709	multi-exon	FALSE	canonical	0	0	junction_2	40.5670740872447	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGATCTATGCAGTCTCA	NA	False	NA	NA	False	NA	NA	NA	149242144	149090887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_149096366_149115988_149116128_149118839_149119069_149203337_149203438_149241957
ES.37809.10	chrX	-	465	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	3	396	-1	-145	multi-exon	FALSE	canonical	0	0	junction_2	131	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTCTTGGCTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	149242147	149192311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149242067
ES.37809.11	chrX	-	575	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	3	738	-1	-145	multi-exon	FALSE	canonical	3	95	junction_2	83.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTCTTGGCTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	149242147	149192311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149241957
ES.37809.12	chrX	-	610	5	NNC	ENSMUSG00000041353.13	novel	864	3	NA	NA	0	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.29903810567666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTCTTGGCTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	149242146	149192311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149192597_149192920_149192972_149193091_149193187_149203337_149203438_149242067
ES.37809.13	chrX	-	414	3	FSM	ENSMUSG00000041353.13	ENSMUST00000141948.8	1250	3	98	738	98	-145	multi-exon	FALSE	canonical	3	12	junction_2	125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTCTTGGCTTTTGT	NA	False	NA	NA	False	TATAAA	-19	NA	149224004	149192311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149223975
ES.37809.15	chrX	-	155	1	Intergenic	novelGene_30974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATGTACTCATAAA	NA	False	NA	NA	False	NA	NA	NA	149229192	149229037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149229000_149229200
ES.37809.16	chrX	-	3019	2	Genic_Genomic	ENSMUSG00000041353.13	novel	1433	3	NA	NA	1	-17844	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATCCACAGTATCTTCA	NA	False	NA	NA	False	NA	NA	NA	149242145	149238793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_149240100_149240432
ES.37809.17	chrX	-	3087	1	Intergenic	novelGene_30975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	149292346	149289259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149289300_149292300
ES.37809.18	chrX	-	3327	6	ISM	ENSMUSG00000025269.17	ENSMUST00000112725.8	3613	7	1686	83	-9	-83	3prime_fragment	FALSE	canonical	3	13	junction_1	30.3539124331609	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACTTTCTATAATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	149371154	149302597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_149305207_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ES.37809.19	chrX	-	2198	6	ISM	ENSMUSG00000025269.17	ENSMUST00000112725.8	3613	7	1714	1184	19	-351	3prime_fragment	FALSE	canonical	3	13	junction_1	30.3539124331609	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTTGTCTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	149371126	149303698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_149305207_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ES.37809.2	chrX	-	1198	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	4	-338	0	2	multi-exon	FALSE	canonical	0	0	junction_2	131	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATCTGACTTGAGAGG	NA	False	NA	NA	False	GATAAA	-17	NA	149242146	149191577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149242067
ES.37809.20	chrX	-	1090	1	Antisense	novelGene_ENSMUSG00000025270.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACGATCTTTGAA	NA	False	NA	NA	False	TATAAA	-14	NA	149337587	149336497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_149336500_149337600
ES.37809.21	chrX	-	4525	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	-27	-2646	26	0	multi-exon	FALSE	canonical	0	0	junction_4	32.5662401882686	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGATCAGATTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	149371119	149351857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
ES.37809.22	chrX	-	4851	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-321	-2646	-321	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGATCAGATTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	149371466	149351857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ES.37809.23	chrX	-	2184	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	-298	-2	-298	1	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTGAGTGGATATTT	NA	False	NA	-2	True	AATAAA	-23	NA	149371443	149354501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ES.37809.3	chrX	-	1278	3	FSM	ENSMUSG00000041353.13	ENSMUST00000163233.2	1256	3	-22	0	-22	0	multi-exon	FALSE	canonical	3	16	junction_2	123	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	False	NA	NA	False	GATAAA	-15	NA	149223923	149191579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149223762
ES.37809.4	chrX	-	1570	5	NNC	ENSMUSG00000041353.13	novel	1316	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.591717135396	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	False	NA	NA	False	GATAAA	-15	NA	149242146	149191579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149192597_149193091_149193187_149194630_149194800_149203337_149203438_149241957
ES.37809.5	chrX	-	1251	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	59	6	55	0	multi-exon	FALSE	canonical	3	95	junction_2	83.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	False	NA	NA	False	GATAAA	-15	NA	149242091	149191579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149241957
ES.37809.6	chrX	-	2543	12	Fusion	ENSMUSG00000041353.13_ENSMUSG00000025269.17	novel	969	5	NA	NA	26	0	multi-exon	FALSE	canonical	0	0	junction_2	77.0195853593462	123	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATATCTGACTTGAGA	NA	False	NA	NA	False	GATAAA	-15	NA	149371119	149191579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_149192597_149203337_149203438_149277954_149277997_149282996_149283267_149285481_149285573_149286505_149286665_149291762_149291944_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ES.37809.7	chrX	-	868	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	3	445	-1	83	multi-exon	FALSE	canonical	3	95	junction_2	83.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTGTGGTTTTCCT	NA	False	NA	NA	False	TTTAAA	-39	NA	149242147	149192018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149241957
ES.37809.8	chrX	-	686	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	3	627	-1	-34	multi-exon	FALSE	canonical	3	95	junction_2	83.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTTCTGTCATGTCT	NA	False	NA	NA	False	NA	NA	NA	149242147	149192200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149192597_149203337_149203438_149241957
ES.37809.9	chrX	-	6435	1	NIC	ENSMUSG00000041353.13	novel	1250	3	NA	NA	19776	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTTGGCTTTTGTTTGT	NA	False	NA	NA	False	TATAAA	-23	NA	149198742	149192307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149192300_149198700
ES.3781.1	chr10	-	205	1	Intergenic	novelGene_2869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAACATTTAA	8313	False	NA	NA	False	NA	NA	NA	116507082	116506877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116506900_116507100
ES.37810.1	chrX	-	6661	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	-1	30944	intron_retention	FALSE	non_canonical	0	0	junction_1	7.71995033248885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAACTTTCCATCAGGGG	NA	False	NA	NA	False	NA	NA	NA	149440396	149397355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149397447_149428303_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.10	chrX	-	6598	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	9.69535971483266	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149440393	149428301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431897_149431954_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440253
ES.37810.11	chrX	-	6509	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	7.71995033248885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149440393	149428301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431916_149431975_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.12	chrX	-	6508	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	7.71995033248885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTATTCTGTCCTT	NA	False	NA	-21	True	ATTAAA	-14	NA	149440393	149428303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431947_149432005_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.13	chrX	-	4524	3	ISM	ENSMUSG00000025272.17	ENSMUST00000169450.8	684	5	633	-4003	633	-1	3prime_fragment	FALSE	canonical	3	21	junction_1	1.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGCTTATTCTGTCCT	NA	False	NA	-22	True	ATTAAA	-13	NA	149434034	149428304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_149432652_149433429_149433545_149433972
ES.37810.14	chrX	-	6507	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	7.71995033248885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGCTTATTCTGTCC	NA	False	NA	-23	True	ATTAAA	-12	NA	149440393	149428305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431987_149432044_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.15	chrX	-	5100	5	NNC	ENSMUSG00000025272.17	novel	684	5	NA	NA	2	-2	intron_retention	TRUE	canonical	0	0	junction_1	11.9268604418766	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGCTTATTCTGTCC	NA	False	NA	-23	True	ATTAAA	-12	NA	149434714	149428305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149432047_149432107_149432652_149433429_149434036_149434411_149434455_149434548
ES.37810.16	chrX	-	5347	11	NNC	ENSMUSG00000025272.17	novel	6610	13	NA	NA	1521	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	8.28009661779378	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGCTTATTCTGTCC	NA	False	NA	-23	True	ATTAAA	-12	NA	149437403	149428305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149432220_149432279_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984
ES.37810.17	chrX	-	5915	12	NNC	ENSMUSG00000025272.17	novel	6610	13	NA	NA	862	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6794001131552	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGAGCTTATTCTGTC	NA	False	NA	-24	True	ATTAAA	-11	NA	149438062	149428306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431927_149431984_149432652_149433429_149433545_149433972_149434036_149434331_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984
ES.37810.18	chrX	-	6505	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.86416621656027	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGAGCTTATTCTGTC	NA	False	NA	-24	True	ATTAAA	-11	NA	149440377	149428306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431927_149431984_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438965_149440340
ES.37810.2	chrX	-	4231	2	ISM	ENSMUSG00000025272.17	ENSMUST00000087253.11	3224	14	8264	-575	2536	571	3prime_fragment	FALSE	canonical	3	31	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGATGGTGGAAAGGG	NA	False	NA	NA	False	NA	NA	NA	149432131	149427728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_149428518_149428689
ES.37810.3	chrX	-	6507	14	NNC	ENSMUSG00000025272.17	novel	6610	13	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9.91920019680915	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATTCTGTCCTTTAAT	NA	False	NA	-17	True	ATTAAA	-18	NA	149440413	149428299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431885_149431945_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438588_149438879_149438950_149440340
ES.37810.4	chrX	-	6571	13	FSM	ENSMUSG00000025272.17	ENSMUST00000112709.8	6610	13	39	0	2	0	multi-exon	FALSE	canonical	3	18	junction_12	3.93964888452427	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATTCTGTCCTTTAAT	NA	False	NA	-17	True	ATTAAA	-18	NA	149440393	149428299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.5	chrX	-	6561	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	-10	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	7.71995033248885	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTATTCTGTCCTTTAA	NA	False	NA	-18	True	ATTAAA	-17	NA	149440442	149428300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431927_149431984_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440340
ES.37810.6	chrX	-	588	2	NNC	ENSMUSG00000025272.17	novel	6610	13	NA	NA	5602	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149429065	149428301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428514_149428689
ES.37810.7	chrX	-	6658	13	NIC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	0	-2	intron_retention	FALSE	canonical	1	1	junction_12	7.62488615579858	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149440395	149428301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440253
ES.37810.8	chrX	-	6462	14	NNC	ENSMUSG00000025272.17	novel	3224	14	NA	NA	2	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	9.91920019680915	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTATTCTGTCCTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	149440393	149428301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149428518_149428689_149431957_149432017_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438565_149438879_149438950_149440340
ES.37811.1	chrX	+	179	1	Intergenic	novelGene_30977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGGAACACTTAC	NA	False	NA	NA	False	NA	NA	NA	149504330	149504509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149504300_149504500
ES.37812.1	chrX	-	2097	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	10	0	10	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596693	149589416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ES.37812.10	chrX	-	2478	12	NIC	ENSMUSG00000025268.16	novel	2183	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	35	junction_11	45.1689207858532	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149595954	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
ES.37812.11	chrX	-	3026	8	NIC	ENSMUSG00000025268.16	novel	2572	11	NA	NA	14	1	intron_retention	FALSE	canonical	3	170	junction_6	15.3609629800175	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTATTGCCATTTTTGT	NA	False	NA	-2	True	NA	NA	NA	149595940	149589418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592323_149592698_149592794_149593339_149594179_149594818_149595311_149595666
ES.37812.3	chrX	-	2046	13	NNC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	36	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	61.3344089579595	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149596667	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149589552_149589705_149590178_149590591_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ES.37812.4	chrX	-	2192	13	NIC	ENSMUSG00000025268.16	novel	2183	13	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	35	junction_12	45.1259810604342	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149595994	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149595816
ES.37812.5	chrX	-	2491	9	NIC	ENSMUSG00000025268.16	novel	2572	11	NA	NA	186	-1	intron_retention	FALSE	canonical	3	154	junction_7	17.7548408891772	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149595271	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592149_149592242_149592323_149592698_149592794_149593339_149593741_149593869_149594179_149594818
ES.37812.6	chrX	-	2073	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	58	52	-6	-1	multi-exon	FALSE	canonical	3	26	junction_12	47.4332864839309	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149597283	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
ES.37812.7	chrX	-	2028	14	NNC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	11	-1	intron_retention	TRUE	canonical	0	0	junction_2	59.4014523760042	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149596692	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149589552_149589705_149589837_149589903_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ES.37812.8	chrX	-	4530	6	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	18	-1	intron_retention	FALSE	canonical	3	63	junction_5	53.2150354693107	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149596685	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149590683_149591716_149592149_149592242_149592323_149592698_149595311_149595666_149595734_149596611
ES.37812.9	chrX	-	2525	11	NIC	ENSMUSG00000025268.16	novel	2107	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	63	junction_10	39.2587569849072	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	False	NA	-1	True	NA	NA	NA	149596702	149589417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ES.37813.1	chrX	+	171	1	Intergenic	novelGene_30978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAGGTAAATTGA	NA	False	NA	NA	False	NA	NA	NA	149703190	149703361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149703200_149703400
ES.37814.1	chrX	-	1005	5	Genic_Genomic	ENSMUSG00000081194.2	novel	988	2	NA	NA	-31766	5795	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTGTTTTTTATA	NA	False	NA	NA	False	AATAAA	-12	NA	149740921	149701820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_149701994_149708729_149709193_149716317_149716396_149740295_149740429_149740763
ES.37814.2	chrX	-	995	5	Genic_Genomic	ENSMUSG00000081194.2	novel	988	2	NA	NA	-31779	5795	multi-exon	FALSE	canonical	0	0	junction_3	1.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTGTTTTTTATA	NA	False	NA	NA	False	AATAAA	-12	NA	149740934	149701820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_149701994_149708729_149709193_149716317_149716396_149740318_149740429_149740763
ES.37815.1	chrX	+	175	1	Intergenic	novelGene_30979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149750808	149750983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149750800_149751000
ES.37816.1	chrX	+	188	1	Intergenic	novelGene_30980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149784240	149784428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149784200_149784400
ES.37817.1	chrX	+	1887	1	Genic_Genomic	ENSMUSG00000081782.2	novel	NA	NA	NA	NA	102	1330	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGCAAAAGGAAGGTGAT	4511	False	NA	NA	False	NA	NA	NA	149788967	149790854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_149789000_149790900
ES.37818.1	chrX	+	194	1	Intergenic	novelGene_30981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTACCCCGGC	9276	False	NA	NA	False	NA	NA	NA	149793732	149793926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149793700_149793900
ES.37819.1	chrX	-	4727	15	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	82	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	148.126204464232	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTCATTTCTTTGG	NA	False	NA	-7	True	NA	NA	NA	149800236	149766127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149800196
ES.37819.10	chrX	-	4732	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-16	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTTTTCATTTCTT	NA	False	NA	-10	True	NA	NA	NA	149800334	149766130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.11	chrX	-	4776	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	45	6	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	138.86188181867	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTTTTCATTTCTT	NA	False	NA	-10	True	NA	NA	NA	149800273	149766130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786584_149787240_149787282_149797016_149797086_149800196
ES.37819.12	chrX	-	4670	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	36	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTTTTCATTTCTT	NA	False	NA	-10	True	NA	NA	NA	149800282	149766130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766913_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.13	chrX	-	3804	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	65	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.941062723402	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTTTTCATTTCTT	NA	False	NA	-10	True	NA	NA	NA	149800253	149766130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149768471_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
ES.37819.14	chrX	-	3947	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGTTTTCATTTCTT	NA	False	NA	-10	True	NA	NA	NA	149800298	149766130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767564_149768471_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.16	chrX	-	4820	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	84	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	186.432953347175	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACTGTTTTCATTTC	NA	False	NA	-12	True	NA	NA	NA	149800234	149766132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149798999_149799031_149800196
ES.37819.17	chrX	-	4729	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	83	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTGTTTTCATTT	NA	False	NA	-13	True	NA	NA	NA	149800235	149766133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767107_149767166_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.19	chrX	-	3914	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGACTGTTTTCATT	NA	False	NA	-14	True	NA	NA	NA	149800293	149766134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767564_149768495_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.20	chrX	-	4746	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.985430169514	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTGTTTTCAT	NA	False	NA	-15	True	NA	NA	NA	149800292	149766135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
ES.37819.21	chrX	-	4575	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.107730439658	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTGTTTTCAT	NA	False	NA	-15	True	NA	NA	NA	149800290	149766135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149787240_149787282_149797016_149797086_149800196
ES.37819.22	chrX	-	3807	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.815463352445	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTGTTTTCAT	NA	False	NA	-15	True	NA	NA	NA	149800322	149766135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149768471_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.25	chrX	-	4073	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	61	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800257	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766787_149767521_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.27	chrX	-	4653	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	214.055097521845	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800240	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766913_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149798999_149799031_149800196
ES.37819.28	chrX	-	5817	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	189.39834839565	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800258	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149781494_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.3	chrX	-	3785	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-4	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.815463352445	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTCATTTCTTTGG	NA	False	NA	-7	True	NA	NA	NA	149800322	149766127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149768501_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.35	chrX	-	3552	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800251	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767564_149768813_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.37	chrX	-	3495	5	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	253.304535095604	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800274	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149769183_149770834_149771058_149774131_149774211_149797016_149797086_149800196
ES.37819.39	chrX	-	3728	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.815463352445	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800308	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149768535_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.41	chrX	-	4713	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.985430169514	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800270	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766913_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
ES.37819.42	chrX	-	4888	16	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	140.096062281089	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800276	149766136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
ES.37819.43	chrX	-	4078	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800263	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766771_149767504_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.44	chrX	-	3931	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800261	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767591_149768469_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.45	chrX	-	4628	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.257916324849	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800322	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.48	chrX	-	4650	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	60	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800258	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766736_149766892_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.49	chrX	-	4607	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.895568074927	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800271	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786584_149787240_149787282_149797016_149797086_149800196
ES.37819.5	chrX	-	4927	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	-50	-8	-50	8	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTTTCATTTCTTTG	NA	False	NA	-8	True	NA	NA	NA	149800368	149766128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.50	chrX	-	4810	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	143.915005780804	702	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGAGACTGTTTT	NA	False	NA	-18	True	NA	NA	NA	149800268	149766138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776775_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.54	chrX	-	7320	15	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	58	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	147.661516548449	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800260	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.55	chrX	-	4340	3	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	4674	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	289	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149772294	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834
ES.37819.57	chrX	-	4579	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.200989185413	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800263	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149800196
ES.37819.59	chrX	-	3724	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	47	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.815463352445	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800271	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149768495_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.6	chrX	-	4137	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	67	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	184.985430169514	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTTTCATTTCTTTG	NA	False	NA	-8	True	NA	NA	NA	149800251	149766128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766771_149767504_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
ES.37819.60	chrX	-	3860	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	64	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800254	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767564_149768501_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.63	chrX	-	6410	15	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	104	-7	intron_retention	FALSE	canonical	3	473	junction_7	39.4614898815728	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800214	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.64	chrX	-	4346	18	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	58	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.815463352445	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800260	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767174_149767472_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.65	chrX	-	2476	11	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.431142480359	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149782782	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149767564_149769096_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692
ES.37819.66	chrX	-	3548	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	61	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.432799209266	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800257	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149767569_149768821_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.67	chrX	-	4568	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	47	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	191.959995832465	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	False	NA	-23	True	NA	NA	NA	149800271	149766143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766745_149766903_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.69	chrX	-	4684	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	55	130	55	-130	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGTATCAATAGTTTG	NA	False	NA	NA	False	NA	NA	NA	149800263	149766266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.7	chrX	-	6073	15	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	47	8	intron_retention	FALSE	canonical	3	473	junction_8	38.6272743865085	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTTTCATTTCTTTG	NA	False	NA	-8	True	NA	NA	NA	149800271	149766128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.70	chrX	-	5912	15	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	65	-135	intron_retention	FALSE	canonical	3	473	junction_8	38.6272743865085	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACTGGATGTATCAATA	NA	False	NA	NA	False	NA	NA	NA	149800253	149766271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149786638_149787240_149787282_149797016_149797086_149800196
ES.37819.71	chrX	-	4101	12	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	-1335	-135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	163.266855533211	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACTGGATGTATCAATA	NA	False	NA	NA	False	NA	NA	NA	149784109	149766271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_149766751_149766918_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033
ES.37819.72	chrX	-	3621	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	46	1202	46	-1202	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAATCATGTCAAAATAAA	NA	False	NA	NA	False	AATAAA	-21	NA	149800272	149767338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ES.3782.1	chr10	+	170	1	Intergenic	novelGene_2870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGGGGTGGGGTGCGG	NA	False	NA	NA	False	NA	NA	NA	116702423	116702593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116702400_116702600
ES.37820.1	chrX	+	183	1	Intergenic	novelGene_30982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAATCTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	149803341	149803524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149803300_149803500
ES.37821.1	chrX	-	210	1	Intergenic	novelGene_30983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTTACATGACATATGA	NA	False	NA	NA	False	NA	NA	NA	149823106	149822896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149822900_149823100
ES.37822.1	chrX	+	3795	6	NNC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-1974	1593	intron_retention	FALSE	canonical	0	0	junction_2	181.175053470394	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATCTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149827171	149854257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149827677_149829082_149829197_149849176_149849351_149849705_149849884_149850008_149850448_149851872
ES.37822.11	chrX	+	4293	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-273	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.124234121419	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149829892	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149849987_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.12	chrX	+	3741	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-268	-420	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	100.965649028454	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCTACATTGATGTTAA	NA	False	NA	78	True	TTTAAA	-15	NA	149829897	149872097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852745_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.13	chrX	+	4107	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-268	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.725187838757	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCAGAGCACTGCTA	NA	False	NA	17	True	AATACA	-20	NA	149829897	149872514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855239_149855501_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.15	chrX	+	4121	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-263	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9496068277082	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCAGAGCACTGCTA	NA	False	NA	17	True	AATACA	-20	NA	149829902	149872514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830379_149830518_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.17	chrX	+	5315	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-258	-1056	-258	1056	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTCAGTACAGGCACCT	NA	False	NA	NA	False	ATTAAA	-17	NA	149829907	149873573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.18	chrX	+	4277	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-255	161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9496068277082	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGGTCTTAAGCCTC	NA	False	NA	9	True	ATTAAA	-18	NA	149829910	149872678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830379_149830518_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.19	chrX	+	3699	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-254	-412	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	95.5735972954874	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGATGTTAATTTTTTAA	NA	False	NA	86	True	TTTAAA	-23	NA	149829911	149872105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149871598
ES.37822.2	chrX	+	4467	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-455	-11	-455	11	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTATGGTCCGTCCGTTT	NA	False	NA	31	True	AATACA	-34	NA	149829710	149872528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.21	chrX	+	3510	18	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	-254	164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149829911	149872681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830069_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.24	chrX	+	6291	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-249	-2041	-249	2041	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATAGGGAATGTCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	149829916	149874558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.26	chrX	+	4068	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-249	-4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	99.3573119228069	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTCAGAGCACTGCT	NA	False	NA	16	True	AATACA	-19	NA	149829916	149872513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830800_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.27	chrX	+	3594	6	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-248	18227	-248	1626	5prime_fragment	FALSE	canonical	3	331	junction_3	35.8184310097469	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGCTTATGAACT	NA	False	NA	NA	False	NA	NA	NA	149829917	149854290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637
ES.37822.28	chrX	+	4105	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-248	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	95.5735972954874	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829917	149872517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149871598
ES.37822.29	chrX	+	4400	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-248	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	128.864365483085	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829917	149872517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149866129_149866281_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.3	chrX	+	4018	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-427	410	-427	-410	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGTTAATTTTTTAAAT	NA	False	NA	88	True	TTTAAA	-25	NA	149829738	149872107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.30	chrX	+	2902	18	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	-247	-437	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	61	True	NA	NA	NA	149829918	149872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830069_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.31	chrX	+	3738	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-247	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.386000548727	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCCTACATTGATGTTAA	NA	False	NA	78	True	TTTAAA	-15	NA	149829918	149872097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849795_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.32	chrX	+	4140	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	100.965649028454	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829918	149872517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852745_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.33	chrX	+	4241	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-246	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	100.375247503648	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829919	149872517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870969_149871108_149871598
ES.37822.35	chrX	+	4400	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-242	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.239378527853	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149829923	149872680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850442_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.39	chrX	+	4020	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-214	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9496068277082	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGAGCACTGCTATG	NA	False	NA	19	True	AATACA	-22	NA	149829951	149872516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830329_149830522_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.4	chrX	+	4363	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-289	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	101.386000548727	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149829876	149872680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849795_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.41	chrX	+	3821	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-87	-412	intron_retention	FALSE	canonical	3	331	junction_3	38.6763412824947	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGATGTTAATTTTTTAA	NA	False	NA	86	True	TTTAAA	-23	NA	149830078	149872105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.42	chrX	+	4009	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTAACTTTCAGAGCA	NA	False	NA	11	True	AATACA	-14	NA	149830163	149872508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849161_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.43	chrX	+	4611	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.239378527853	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149830163	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149851058_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.45	chrX	+	2048	6	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	20	346	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.309822815895	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACCCAAAAAACCAA	NA	False	NA	NA	False	AATAAA	-16	NA	149830185	149853010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850006_149850448_149851872_149851963_149852637
ES.37822.46	chrX	+	5008	16	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	33	437	33	-437	intron_retention	FALSE	canonical	3	331	junction_3	35.5948810302206	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	61	True	NA	NA	NA	149830198	149872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815
ES.37822.48	chrX	+	4529	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	44	-2	intron_retention	FALSE	canonical	3	331	junction_3	38.0919939094818	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149830209	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.49	chrX	+	3384	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	63	-414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9496068277082	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGATGTTAATTTTTT	NA	False	NA	84	True	TTTAAA	-21	NA	149830228	149872103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830379_149830518_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.5	chrX	+	4450	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-285	-164	-285	164	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149829880	149872681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.50	chrX	+	3767	17	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	73	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	130.781291069289	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTAACTTTCAGAGCA	NA	False	NA	11	True	AATACA	-14	NA	149830238	149872508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869634_149869815_149869978_149871598
ES.37822.51	chrX	+	4606	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	132	163	intron_retention	FALSE	canonical	3	331	junction_3	38.0919939094818	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149830297	149872680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.52	chrX	+	3842	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	177	162	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	95.5735972954874	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGGTCTTAAGCCTCA	NA	False	NA	10	True	ATTAAA	-19	NA	149830342	149872679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149871598
ES.37822.55	chrX	+	2741	18	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	760	-437	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	134.463434527434	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	61	True	NA	NA	NA	149830925	149872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852745_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862108_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.56	chrX	+	3259	19	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	3017	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.242166138934	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGATGTTAATTTTTTA	NA	False	NA	85	True	TTTAAA	-22	NA	149833182	149872104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149833573_149835646_149835740_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.57	chrX	+	3106	18	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	3053	-437	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	61	True	NA	NA	NA	149833218	149872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149833573_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.58	chrX	+	3308	5	NNC	ENSMUSG00000025265.15	novel	861	2	NA	NA	3308	1626	intron_retention	FALSE	canonical	0	0	junction_1	161.800030902346	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGCTTATGAACT	NA	False	NA	NA	False	NA	NA	NA	149833473	149854290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149833573_149849176_149849351_149849705_149849884_149850008_149850448_149851872
ES.37822.59	chrX	+	7004	16	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-4179	163	intron_retention	FALSE	canonical	3	331	junction_2	40.3581741685897	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149846199	149872680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149849351_149849705_149849884_149850008_149850448_149851872_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.6	chrX	+	3257	19	NNC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-284	-438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	98.9496068277082	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACTA	NA	False	NA	60	True	NA	NA	NA	149829881	149872079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149829928_149830517_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.60	chrX	+	3014	16	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	19539	2	-674	-2	3prime_fragment	FALSE	canonical	3	331	junction_1	37.0219154315687	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149849704	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.61	chrX	+	2977	2	FSM	ENSMUSG00000025265.15	ENSMUST00000124882.2	861	2	-490	-1626	-490	1626	multi-exon	FALSE	canonical	3	422	junction_1	0	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGCTTATGAACT	NA	False	NA	NA	False	NA	NA	NA	149849888	149854290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_149850448_149851872
ES.37822.62	chrX	+	2578	15	NNC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-56	163	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	109.961681637612	693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTCTTAAGCCTCAT	NA	False	NA	11	True	ATTAAA	-20	NA	149850322	149872680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149850448_149851872_149851963_149852745_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.63	chrX	+	2551	1	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	1335	1600	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	623	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149851713	149854264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149851700_149854300
ES.37822.64	chrX	+	4433	13	NNC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	2303	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.855976103667	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149852681	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149854081_149854291_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.65	chrX	+	3128	1	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	5112	5954	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAACCAAAACAAGCAA	NA	False	NA	NA	False	NA	NA	NA	149855490	149858618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149855500_149858600
ES.37822.66	chrX	+	1823	2	Intergenic	novelGene_30984	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149856526	149858537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149857577_149857764
ES.37822.67	chrX	+	1564	7	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	32945	2	-5995	-2	3prime_fragment	FALSE	canonical	3	395	junction_4	23.9072281027215	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149863110	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.68	chrX	+	6205	5	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-4862	164	intron_retention	FALSE	canonical	3	423	junction_1	11.8822346383161	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTCTTAAGCCTCATC	NA	False	NA	12	True	ATTAAA	-21	NA	149864243	149872681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149868658_149869109_149869212_149869515_149869978_149870963_149871108_149871598
ES.37822.69	chrX	+	4953	5	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-3334	162	intron_retention	FALSE	canonical	3	395	junction_2	22.5541016225431	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAGGTCTTAAGCCTCA	NA	False	NA	10	True	ATTAAA	-19	NA	149865771	149872679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.7	chrX	+	4302	5	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	-281	18227	-281	1626	intron_retention	FALSE	canonical	3	331	junction_3	37.3589012151053	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGAAGCTTATGAACT	NA	False	NA	NA	False	NA	NA	NA	149829884	149854290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872
ES.37822.70	chrX	+	2656	6	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	37287	2	-1653	-2	3prime_fragment	FALSE	canonical	3	395	junction_3	20.4743742273116	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149867452	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.71	chrX	+	4422	1	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	-1447	-437	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	660	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTAT	NA	False	NA	61	True	NA	NA	NA	149867658	149872080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149867700_149872100
ES.37822.72	chrX	+	158	1	Intergenic	novelGene_30985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAAAAGGGTTCTAGAAG	NA	False	NA	NA	False	NA	NA	NA	149867893	149868051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149867900_149868100
ES.37822.73	chrX	+	5727	4	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	990	4587	intron_retention	TRUE	non_canonical	0	0	junction_1	0	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	149870095	149877104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149873406_149873595_149873773_149874666_149875428_149875625
ES.37822.74	chrX	+	6812	2	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	990	4587	intron_retention	TRUE	non_canonical	0	0	junction_1	0	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAAACAAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	149870095	149877104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149875428_149875624
ES.37822.75	chrX	+	1928	1	NIC	ENSMUSG00000025265.15	novel	3240	18	NA	NA	1482	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	658	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCAGAGCACTGCTAT	NA	False	NA	18	True	AATACA	-21	NA	149870587	149872515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_149870600_149872500
ES.37822.76	chrX	+	174	1	Intergenic	novelGene_30986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	149875438	149875612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149875400_149875600
ES.37822.77	chrX	+	175	2	Antisense	novelGene_ENSMUSG00000025264.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	149875438	149910413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_149875487_149910286
ES.37822.78	chrX	+	192	1	Intergenic	novelGene_30987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAGAGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149877295	149877487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149877300_149877500
ES.37822.79	chrX	+	136	1	Intergenic	novelGene_30988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGGCATGGTGGAAAGGT	NA	False	NA	NA	False	AATAAA	-23	NA	149882299	149882435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149882300_149882400
ES.37822.8	chrX	+	3384	18	NNC	ENSMUSG00000025265.15	novel	594	3	NA	NA	-281	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.75447075357	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTATGGTCCGTCCGTTT	NA	False	NA	31	True	AATACA	-34	NA	149829884	149872528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149830069_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ES.37822.80	chrX	+	182	1	Intergenic	novelGene_30989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTATGTCGGTTTT	NA	False	NA	NA	False	NA	NA	NA	149885894	149886076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149885900_149886100
ES.37822.81	chrX	+	112	1	Intergenic	novelGene_30990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	149905555	149905667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149905600_149905700
ES.37822.82	chrX	+	3017	2	Intergenic	novelGene_30991	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149907809	149911029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149910225_149910427
ES.37822.83	chrX	+	180	1	Intergenic	novelGene_30992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	149910233	149910413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149910200_149910400
ES.37823.1	chrX	-	3781	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	18	-3	-2	3	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTCCTTGTTTCAAGT	NA	False	NA	2	True	AAAAAG	-21	NA	149879521	149870086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.10	chrX	-	1224	4	NIC	ENSMUSG00000025264.13	novel	3796	5	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	168.309239199754	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879537	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149873411_149874671_149874764_149879160_149879252_149879424
ES.37823.11	chrX	-	1564	4	NIC	ENSMUSG00000025264.13	novel	3804	5	NA	NA	9	-6	intron_retention	FALSE	canonical	3	354	junction_3	6.59966329107444	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879510	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.2	chrX	-	3685	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	19	-2386	-1	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCATTTTCCTTGTTTC	NA	False	NA	-2	True	AAAAAG	-17	NA	149879520	149870090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
ES.37823.3	chrX	-	3950	4	NIC	ENSMUSG00000025264.13	novel	3804	5	NA	NA	14	-1	intron_retention	FALSE	canonical	3	354	junction_3	6.59966329107444	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCATTTTCCTTGTTT	NA	False	NA	-3	True	AAAAAG	-16	NA	149879505	149870091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.4	chrX	-	3802	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	1	1	1	-1	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCATTTTCCTTGTTT	NA	False	NA	-3	True	AAAAAG	-16	NA	149879538	149870091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.5	chrX	-	1853	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	19	1924	-1	463	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGATGGGAATTCAAGT	NA	False	NA	NA	False	ATTAAA	-34	NA	149879520	149872013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.6	chrX	-	1312	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	0	6	0	-6	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879539	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
ES.37823.7	chrX	-	1398	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	14	2392	-6	-6	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879525	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.8	chrX	-	1420	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	-17	2393	-17	-6	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879556	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ES.37823.9	chrX	-	1292	4	NIC	ENSMUSG00000025264.13	novel	3804	5	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	147.521749808856	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTATCCATTGTC	NA	False	NA	-9	True	AATAAA	-15	NA	149879510	149872482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_149873411_149873591_149873778_149874671_149874764_149879424
ES.37824.1	chrX	+	3049	1	Intergenic	novelGene_30993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAATAACCAAT	NA	False	NA	NA	False	NA	NA	NA	149916380	149919429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149916400_149919400
ES.37825.1	chrX	+	10442	24	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-53656	44	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.29438719175833	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCTTAAATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	149927417	150103192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149927451_149940276_149940367_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.10	chrX	+	10519	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-192	39	multi-exon	FALSE	canonical	3	19	junction_6	4.9057227502662	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCAACTGGCTTAAATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	149952503	150103187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.11	chrX	+	10521	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-185	40	multi-exon	FALSE	canonical	1	3	junction_1	7.09382224541797	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACTGGCTTAAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	149952510	150103188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952717_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.12	chrX	+	5663	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-184	157	multi-exon	FALSE	canonical	3	19	junction_6	4.9057227502662	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTATCCTCTTTGATA	NA	False	NA	NA	False	NA	NA	NA	149952511	150098339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.13	chrX	+	5827	17	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-173	-25957	multi-exon	FALSE	canonical	3	19	junction_6	5.178078794302	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTCTTATTGTAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	149952522	150072167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255
ES.37825.14	chrX	+	8753	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5394	22	NA	NA	-167	0	multi-exon	FALSE	canonical	1	1	junction_18	7.23398773239191	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGCCTTGATTCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	149952528	150101305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150077038_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.16	chrX	+	8482	23	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-36	1	multi-exon	FALSE	canonical	3	19	junction_6	4.9057227502662	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCCTTGATTCTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	149952659	150101306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.17	chrX	+	1042	4	ISM	ENSMUSG00000041245.14	ENSMUST00000149140.8	5367	22	378	103764	378	-15300	5prime_fragment	FALSE	canonical	3	20	junction_2	5.55777733351102	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTTAATTTTGTT	NA	False	NA	NA	False	AGTAAA	-13	NA	149981513	149994360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_149981670_149990593_149990767_149992270_149992492_149993868
ES.37825.18	chrX	+	1913	1	NIC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	1105	-17591	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCATTGTCTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	150078620	150080533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150078600_150080500
ES.37825.19	chrX	+	4862	2	NNC	ENSMUSG00000041245.14	novel	6410	5	NA	NA	20473	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGCTTAAATTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	150097988	150103190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150098603_150098942
ES.37825.2	chrX	+	372	1	Intergenic	novelGene_30994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAGTCCTTCAATTC	NA	False	NA	NA	False	NA	NA	NA	149935444	149935816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_149935400_149935800
ES.37825.3	chrX	+	10387	23	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-29334	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.57837833456592	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGCTTAAATTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	149951739	150103190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149951810_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.4	chrX	+	6911	23	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-29306	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	8.27185310066664	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAACTGGCTTAAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	149951767	150103188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149951940_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150101370
ES.37825.5	chrX	+	10524	23	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-29296	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.57837833456592	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACCTTATTAAAATTC	NA	False	NA	NA	False	AATAAA	-24	NA	149951777	150103153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149952022_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.6	chrX	+	10468	23	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-29285	42	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	5.93142631934497	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGGCTTAAATTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	149951788	150103190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149951940_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.7	chrX	+	10400	23	NNC	ENSMUSG00000041245.14	novel	5253	22	NA	NA	-29003	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.57837833456592	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCACCTTATTAAAATT	NA	False	NA	NA	False	AATAAA	-23	NA	149952070	150103152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_149952192_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.8	chrX	+	10393	24	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-218	16	multi-exon	FALSE	canonical	0	0	junction_17	7.52940047119135	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTCTGTCATATTTA	NA	False	NA	NA	False	AATAAA	-35	NA	149952477	150103164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150069373_150069501_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ES.37825.9	chrX	+	4855	20	Fusion	ENSMUSG00000086286.2_ENSMUSG00000041245.14	novel	5253	22	NA	NA	-216	-19037	multi-exon	FALSE	canonical	3	19	junction_6	5.21504323091161	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTATAATGAATTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	149952479	150079087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359
ES.37826.1	chrX	-	247	1	Intergenic	novelGene_30995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	149956231	149955984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149956000_149956200
ES.37827.1	chrX	-	168	1	Intergenic	novelGene_30996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	149958816	149958648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149958600_149958800
ES.37828.1	chrX	-	155	1	Intergenic	novelGene_30997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	149997192	149997037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149997000_149997200
ES.37829.1	chrX	-	231	1	Intergenic	novelGene_30998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAGAATTCTCATGAT	NA	False	NA	NA	False	NA	NA	NA	149997884	149997653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_149997700_149997900
ES.3783.1	chr10	+	160	1	Intergenic	novelGene_2872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	116759098	116759258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116759100_116759300
ES.37830.1	chrX	-	554	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	-39	-32	-39	32	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCTCCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	149998684	149998130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_149998100_149998700
ES.37831.1	chrX	-	338	1	Intergenic	novelGene_30999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	AAGAAA	-21	NA	150012447	150012109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150012100_150012400
ES.37832.1	chrX	-	959	4	NNC	ENSMUSG00000084771.9	novel	641	5	NA	NA	-13675	0	intron_retention	FALSE	canonical	0	0	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGTATCTTCTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	150108077	150076219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_150076884_150078466_150078569_150082101_150082178_150107960
ES.37833.1	chrX	+	3890	1	Genic_Genomic	ENSMUSG00000025262.9	novel	NA	NA	NA	NA	-15	-123793	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACTATGACTTAAAACT	NA	False	NA	NA	False	AATAAA	-20	NA	150127155	150131045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_150127200_150131000
ES.37833.10	chrX	+	206	1	Intergenic	novelGene_31004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTTTAGGGTCCCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	150249523	150249729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150249500_150249700
ES.37833.2	chrX	+	7758	16	FSM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	2	-2297	2	2297	multi-exon	FALSE	canonical	2	7	junction_7	3.8262252939418	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGTGTGAAGTTTG	NA	False	NA	11	True	AATAAA	-35	NA	150127172	150257135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
ES.37833.3	chrX	+	1137	1	NIC	ENSMUSG00000025262.9	novel	5463	16	NA	NA	15	-126516	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACCTTTGTTCTATAAT	NA	False	NA	13	True	AATAAA	-14	NA	150127185	150128322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150127200_150128300
ES.37833.4	chrX	+	7838	17	NNC	ENSMUSG00000025262.9	novel	5463	16	NA	NA	40	2294	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	4.62288803130684	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGAGTGTGTGAAGT	NA	False	NA	8	True	AATAAA	-32	NA	150127210	150257132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150188630_150188752_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
ES.37833.5	chrX	+	3543	16	FSM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	55	1865	55	-1865	multi-exon	FALSE	canonical	2	7	junction_7	3.8262252939418	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTGAAGTCCAGTGAGG	NA	False	NA	NA	False	AATATA	-23	NA	150127225	150252973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
ES.37833.6	chrX	+	8597	1	Intergenic	novelGene_31000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAAAATATTTTCC	NA	False	NA	NA	False	NA	NA	NA	150128718	150137315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150128700_150137300
ES.37833.7	chrX	+	2136	2	Intergenic	novelGene_31001	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAAAATATTTTCC	NA	False	NA	NA	False	NA	NA	NA	150133682	150137315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150134049_150135545
ES.37833.8	chrX	+	1204	1	Intergenic	novelGene_31002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTTTGGGGTTAATT	NA	False	NA	NA	False	NA	NA	NA	150142377	150143581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150142400_150143600
ES.37833.9	chrX	+	6828	4	NIC	ENSMUSG00000025262.9	novel	5823	15	NA	NA	113555	2281	intron_retention	FALSE	canonical	2	7	junction_2	1.63299316185545	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCAAAATGATTTT	NA	False	NA	-5	True	AATAAA	-19	NA	150240725	150257119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150240833_150246964_150248481_150250295_150250853_150252471
ES.37834.1	chrX	-	198	1	Intergenic	novelGene_31003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAATGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	150185689	150185491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150185500_150185700
ES.37835.1	chrX	+	6059	22	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-47	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	22.0701828384257	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303620	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.12	chrX	+	5902	22	FSM	ENSMUSG00000041229.16	ENSMUST00000168501.8	6359	22	459	-2	-38	0	multi-exon	FALSE	canonical	2	12	junction_1	20.027645292538	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304126	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.13	chrX	+	5450	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.7983192683853	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304149	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305567_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.14	chrX	+	5860	23	NNC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.118503335186	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304154	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305180_150305285_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.15	chrX	+	4393	8	ISM	ENSMUSG00000041229.16	ENSMUST00000112668.9	2291	15	-20	29882	-2	2855	5prime_fragment	FALSE	canonical	3	75	junction_6	9.01472717959057	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTCCATACTCTCCTC	NA	False	NA	NA	False	AATAAA	-23	NA	150304162	150342334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968
ES.37835.17	chrX	+	5833	22	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.2815731727645	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304178	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355376_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.18	chrX	+	5648	22	NNC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.7782987021553	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTTGCTTGACAT	NA	False	NA	2	True	GATAAA	-15	NA	150304178	150416851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150324974_150325198_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.19	chrX	+	7373	18	ISM	ENSMUSG00000041229.16	ENSMUST00000168501.8	6359	22	515	29682	0	3789	5prime_fragment	FALSE	canonical	2	12	junction_1	21.3705161832305	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGCTTGATTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	150304182	150387171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269
ES.37835.2	chrX	+	5959	21	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_12	14.924727803213	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303648	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.21	chrX	+	5883	22	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.9939182192079	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304183	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305381_150305573_150324738_150325198_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.22	chrX	+	5140	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	29.6551428929284	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304185	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381637_150382273_150382581_150403859_150403956_150408187_150408298_150413145_150413203_150414334
ES.37835.25	chrX	+	5793	23	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.4019665096329	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304191	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150316323_150316400_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.26	chrX	+	5438	22	NNC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	28.6261380963784	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304193	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150412544_150412569_150413145_150413483_150414334
ES.37835.27	chrX	+	5408	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.0318359736342	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150304198	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333831_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380988_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.28	chrX	+	5498	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	27.6280654407796	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTTGCTTGACAT	NA	False	NA	2	True	GATAAA	-15	NA	150304221	150416851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339130_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.3	chrX	+	5720	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.7762486528048	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303656	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.30	chrX	+	5326	20	NIC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	15.3055672162659	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTTGCTTGACAT	NA	False	NA	2	True	GATAAA	-15	NA	150305345	150416851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.31	chrX	+	5403	20	ISM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	26205	6	-6868	-4	3prime_fragment	FALSE	canonical	3	62	junction_10	13.2744312991476	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAATTTTGTTGCTTGAC	NA	False	NA	0	True	GATAAA	-13	NA	150330387	150416849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.32	chrX	+	6282	19	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-6868	1176	combination_of_known_junctions	FALSE	canonical	3	39	junction_10	15.7249703134227	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTTAGTGTTTCTCGTG	NA	False	NA	NA	False	AATATA	-24	NA	150330387	150418031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.33	chrX	+	5048	17	ISM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	31298	3	-1775	-1	3prime_fragment	FALSE	canonical	3	62	junction_7	13.5876782417012	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTTGCTTGACATT	NA	False	NA	3	True	GATAAA	-16	NA	150335480	150416852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.34	chrX	+	7970	14	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	-1762	0	intron_retention	FALSE	canonical	3	39	junction_6	17.1167242345231	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150335493	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.35	chrX	+	4912	16	ISM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	32941	2	-132	0	3prime_fragment	FALSE	canonical	3	62	junction_6	13.8265445189076	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150337123	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.36	chrX	+	4559	14	ISM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	44182	2	-668	0	3prime_fragment	FALSE	canonical	3	62	junction_4	13.6360121884064	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150348364	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.37	chrX	+	220	1	Intergenic	novelGene_31006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	150407509	150407729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150407500_150407700
ES.37835.38	chrX	+	2517	1	NIC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	1520	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAATTTTGTTGCTTGAC	NA	False	NA	0	True	GATAAA	-13	NA	150414332	150416849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150414300_150416800
ES.37835.4	chrX	+	6246	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	-518	0	-3	0	multi-exon	FALSE	canonical	3	62	junction_12	12.6336842339938	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303664	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.5	chrX	+	6208	22	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	22.0488017784175	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150303667	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381600_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.6	chrX	+	5355	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.7762486528048	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150303668	150416853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150303734_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.7	chrX	+	5675	21	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5803989154981	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303668	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381600_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37835.8	chrX	+	3189	14	NNC	ENSMUSG00000041229.16	novel	3732	19	NA	NA	20	1073	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.0541424001256	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGTTTGTCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	150303687	150359905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304085_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150358631
ES.37835.9	chrX	+	6189	23	NNC	ENSMUSG00000041229.16	novel	6359	22	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.5662755494866	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150303712	150416855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150304084_150305383_150305573_150324974_150325198_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ES.37836.1	chrX	-	2654	1	Intergenic	novelGene_31005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTAGTTGTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	150347523	150344869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150344900_150347500
ES.37837.1	chrX	-	2696	2	Antisense	novelGene_ENSMUSG00000041229.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATTAGTTTTAATAACA	NA	False	NA	NA	False	NA	NA	NA	150380912	150376929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150377617_150378903
ES.37838.1	chrX	-	196	1	Intergenic	novelGene_31007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGACATATCTAGGATT	NA	False	NA	NA	False	NA	NA	NA	150481414	150481218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150481200_150481400
ES.37839.1	chrX	+	176	1	Intergenic	novelGene_31008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGGATTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	150497369	150497545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150497400_150497500
ES.3784.1	chr10	-	4809	35	Fusion	ENSMUSG00000064181.7_ENSMUSG00000034057.9	novel	3164	25	NA	NA	10	-10	multi-exon	TRUE	canonical	0	0	junction_3	137.166446637088	211	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGAAAACACGGTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	116786326	116612449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_116612720_116612853_116612929_116613248_116613361_116615453_116615529_116617853_116617942_116619078_116619142_116631344_116631528_116631626_116631680_116631964_116632040_116634488_116634575_116638600_116638665_116639303_116639471_116652695_116652806_116653588_116653698_116658587_116658789_116664861_116664953_116667362_116667474_116668796_116668874_116670353_116670550_116675239_116675391_116684180_116684273_116684929_116685174_116685271_116685340_116697385_116697477_116732522_116732988_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.11	chr10	-	1946	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-6	750	-6	243	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCATCCTGGCTTCA	NA	False	NA	-8	True	AATAAA	-18	NA	116786291	116742438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ES.3784.12	chr10	-	2026	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	1	238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.3372538376213	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCTTGAGCATCCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	116786284	116742443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116743024_116746029_116746100_116746186_116746283_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.15	chr10	-	5843	6	NIC	ENSMUSG00000064181.7	novel	2690	10	NA	NA	-1516	3	intron_retention	FALSE	canonical	3	300	junction_3	32.4012345443812	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTCTTTCTTAGCT	NA	False	NA	-4	True	AATAAA	-13	NA	116757354	116742678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478
ES.3784.16	chr10	-	1879	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	-33	-2	-11	2	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	-5	True	AATAAA	-12	NA	116786369	116742679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.17	chr10	-	4850	10	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	251	junction_6	36.738649880769	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTGTCTTTCTTAGC	NA	False	NA	-5	True	AATAAA	-12	NA	116786334	116742679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.18	chr10	-	3365	10	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	25	1	intron_retention	FALSE	canonical	3	251	junction_7	35.90109871423	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGTGTGTCTTTCTTAG	NA	False	NA	-6	True	AATAAA	-11	NA	116786311	116742680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116775387_116786164
ES.3784.19	chr10	-	1760	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-62	992	-11	1	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCGTGTGTCTTTCTTAG	NA	False	NA	-6	True	AATAAA	-11	NA	116786347	116742680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ES.3784.2	chr10	-	4920	1	Intergenic	novelGene_2871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGCAAATAAGTAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	116741028	116736108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116736100_116741000
ES.3784.20	chr10	-	1263	9	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	109.644596310078	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786295	116742681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116786164
ES.3784.22	chr10	-	1821	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.6481811173691	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCGTGTGTCTTTCTT	NA	False	NA	-8	True	AATAAA	-9	NA	116786300	116742682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773287_116773561_116775105_116775387_116786164
ES.3784.24	chr10	-	4355	4	NNC	ENSMUSG00000064181.7	novel	511	3	NA	NA	2	3768	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	146.390649367445	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGAGTTTCATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	116786334	116769596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116773064_116773123_116773561_116775105_116775387_116786164
ES.3784.25	chr10	-	2144	2	NNC	ENSMUSG00000064181.7	novel	2690	10	NA	NA	-11	-478	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCCTTTGAATTGTAC	NA	False	NA	NA	False	NA	NA	NA	116786347	116775637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116777599_116786164
ES.3784.26	chr10	-	1441	2	NNC	ENSMUSG00000064181.7	novel	2690	10	NA	NA	25	-1145	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAATGTTTTTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	116786311	116776304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116777599_116786164
ES.3784.3	chr10	-	3412	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	39	-1607	-12	614	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGGATTCAAATGTG	NA	False	NA	NA	False	AATAAA	-17	NA	116786297	116741074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.4	chr10	-	2856	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	-14	-998	8	5	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGGTTATTTTCTGTT	NA	False	NA	0	True	ATTAAA	-21	NA	116786350	116741683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.5	chr10	-	2733	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	-40	-3	11	3	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTGGGTTATTTTCTG	NA	False	NA	-2	True	ATTAAA	-19	NA	116786325	116741685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ES.3784.7	chr10	-	2939	11	NNC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	98.5874738493689	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	116786335	116741688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754974_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ES.3784.8	chr10	-	4339	10	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	-8	0	intron_retention	FALSE	canonical	3	251	junction_7	35.90109871423	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	116786293	116741688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116775387_116786164
ES.3784.9	chr10	-	3251	1	NIC	ENSMUSG00000064181.7	novel	2690	10	NA	NA	10899	0	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	116744939	116741688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116741700_116744900
ES.37840.1	chrX	+	179	1	Intergenic	novelGene_31009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGATGTGTG	5799	False	NA	NA	False	NA	NA	NA	150559810	150559989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150559800_150560000
ES.37841.1	chrX	-	1420	5	Antisense	novelGene_ENSMUSG00000083719.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGAGGATACCTTTTG	9699	False	NA	NA	False	NA	NA	NA	150574218	150561492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150562480_150563020_150563106_150566077_150566195_150570464_150570600_150574122
ES.37841.2	chrX	-	176	1	Intergenic	novelGene_31010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	150567743	150567567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150567600_150567700
ES.37842.1	chrX	+	5191	29	NIC	ENSMUSG00000025261.19	novel	5010	25	NA	NA	-10	-2	intron_retention	TRUE	canonical	1	1	junction_2	49.140508145687	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCCATTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	150583868	150656027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150583943_150584149_150584363_150586171_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.10	chrX	+	15035	85	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	0	intron_retention	FALSE	canonical	3	15	junction_1	157.530987125587	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTAGTACTTTCTTT	NA	False	NA	4	True	AATAAA	-21	NA	150586236	150718413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.100	chrX	+	9306	49	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	641	-529	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_20	159.400437784757	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150666222	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.101	chrX	+	9495	50	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	3496	-531	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	154.642611719518	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150669077	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.102	chrX	+	9475	50	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	3496	-529	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	153.640449605897	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150669077	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673846_150674028_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.103	chrX	+	9067	49	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	83415	915	4156	-915	3prime_fragment	FALSE	canonical	3	168	junction_4	146.350173433067	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150669737	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.104	chrX	+	9407	49	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	4157	-529	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_38	149.216970975433	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150669738	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.105	chrX	+	9442	49	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	4158	-528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	154.314972303673	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150669739	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711760_150711877_150712339_150712481_150713058_150713347_150713467_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.107	chrX	+	9136	48	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	5796	-531	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_37	148.660248971487	781	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150671377	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.109	chrX	+	8663	48	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	5915	-915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	156.921368780933	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150671496	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705886_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.11	chrX	+	13461	81	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	19	-911	intron_retention	FALSE	canonical	0	0	junction_62	164.655803401368	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586275	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700416_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.111	chrX	+	5818	25	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	7186	-3521	intron_retention	FALSE	canonical	3	13	junction_9	91.7793909176903	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTTCTTTACAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	150672767	150702087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681574_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114
ES.37842.112	chrX	+	5379	28	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	87401	16327	8142	-3522	internal_fragment	FALSE	canonical	3	173	junction_4	65.1220022071478	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTGTTCTTTACAATT	NA	False	NA	NA	False	AATAAA	-17	NA	150673723	150702086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376
ES.37842.113	chrX	+	9191	45	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	8253	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	155.638925743567	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCCCAAGTAGTACTTT	NA	False	NA	0	True	AATAAA	-17	NA	150673834	150718409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701926_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.115	chrX	+	9427	43	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	8536	-915	intron_retention	FALSE	canonical	3	26	junction_3	149.316524883131	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150674117	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.119	chrX	+	8122	42	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	90494	531	-11173	-531	3prime_fragment	FALSE	canonical	3	173	junction_1	139.238880325038	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150676816	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.12	chrX	+	4689	26	NIC	ENSMUSG00000025261.19	novel	5010	25	NA	NA	26	-2	intron_retention	FALSE	canonical	3	15	junction_1	33.0625104914917	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCCATTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	150586282	150656027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.120	chrX	+	7738	42	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-11173	-912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	149.546321653351	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150676816	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690274_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.121	chrX	+	7668	42	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-11143	-916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	153.56269949756	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCATGTGTGTCCCAGC	NA	False	NA	8	True	AATAAA	-14	NA	150676846	150717497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712333_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.122	chrX	+	7971	42	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-11052	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	150.698334769566	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150676937	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704071_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.123	chrX	+	8079	42	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-11044	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	150.66307143619	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150676945	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706690_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.124	chrX	+	7923	41	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	91593	533	-10074	-533	3prime_fragment	FALSE	canonical	3	190	junction_1	137.263958761942	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCACTTTTCACAACG	NA	False	NA	23	True	AATAAA	-12	NA	150677915	150717880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.125	chrX	+	7758	40	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-8433	-528	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	147.173166128892	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150679556	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691726_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.126	chrX	+	7543	38	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	63195	532	-6551	-532	3prime_fragment	FALSE	canonical	3	202	junction_3	133.853566294074	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150681438	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.129	chrX	+	7255	37	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-4027	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	143.64607354343	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150683962	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710790_150711156_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.13	chrX	+	13650	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	33	-911	intron_retention	FALSE	canonical	3	26	junction_42	157.893992254316	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586289	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.130	chrX	+	6710	36	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-3919	-913	intron_retention	FALSE	canonical	0	0	junction_18	154.2691419671	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150684070	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701581_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.131	chrX	+	4983	25	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	66255	11682	-3491	2	internal_fragment	FALSE	canonical	3	202	junction_1	85.5138776099464	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTACTTTCTGTTG	NA	False	NA	NA	False	AATGAA	-12	NA	150684498	150706731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474
ES.37842.133	chrX	+	6369	34	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-643	-920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	143.440161355902	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCACCATGTGTGTCC	NA	False	NA	4	True	AATAAA	-10	NA	150687346	150717493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690273_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.134	chrX	+	6268	34	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-545	-913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	145.378717608586	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150687444	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704403_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.135	chrX	+	5944	34	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-515	-912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	144.976563129181	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150687474	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697315_150698779_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.137	chrX	+	6581	33	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	359	-528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	151.624317290301	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150688348	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700416_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.138	chrX	+	6230	33	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	359	-913	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	144.421904583195	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150688348	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692585_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.139	chrX	+	6976	33	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	372	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	158.203238425885	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTAGTACTTTCTTT	NA	False	NA	4	True	AATAAA	-21	NA	150688361	150718413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150688428_150689260_150689360_150689946_150690081_150690274_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704113_150704362_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.14	chrX	+	14003	85	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-32	-912	intron_retention	FALSE	canonical	0	0	junction_33	159.633519488288	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586290	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666095_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.140	chrX	+	8883	30	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	406	-915	intron_retention	FALSE	canonical	3	247	junction_1	117.835845834851	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150688395	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150690081_150690271_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.141	chrX	+	6033	32	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	411	-913	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	147.399469259497	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150688400	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150688428_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.142	chrX	+	3662	22	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	415	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	162.248752218228	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150688404	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150688428_150689260_150689360_150689946_150690081_150690271_150690415_150701881_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.144	chrX	+	6731	31	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	1285	-913	intron_retention	FALSE	canonical	0	0	junction_26	147.356242562785	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150689274	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713467_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.145	chrX	+	6835	31	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1896	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	159.829801837941	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATCCCAAGTAGTA	NA	False	NA	-4	True	AATAAA	-13	NA	150689944	150718405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697276_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700416_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.146	chrX	+	6435	31	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	71701	531	-1896	-531	3prime_fragment	FALSE	canonical	3	247	junction_1	119.351772318452	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150689944	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.148	chrX	+	5242	25	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1814	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.183222690858	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150690026	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150690081_150690271_150690318_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.15	chrX	+	13501	81	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-29	-912	intron_retention	FALSE	canonical	3	27	junction_52	160.857061936988	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586293	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.150	chrX	+	6259	30	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1571	-525	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	146.422539410988	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150690269	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150690441_150691726_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.151	chrX	+	7307	29	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1517	-526	intron_retention	FALSE	canonical	3	276	junction_1	117.050943906437	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	30	True	AATAAA	-19	NA	150690323	150717887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.152	chrX	+	7255	28	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1437	-912	intron_retention	FALSE	canonical	3	141	junction_17	128.238985146427	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150690403	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.153	chrX	+	8501	26	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-989	-913	intron_retention	FALSE	canonical	3	293	junction_8	114.384614350008	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150690851	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150707758_150710626_150711395_150711758_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.154	chrX	+	7595	26	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-569	-526	intron_retention	FALSE	canonical	3	293	junction_7	109.674762821718	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	30	True	AATAAA	-19	NA	150691271	150717887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150691953_150692404_150692584_150692855_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150716127_150717276
ES.37842.155	chrX	+	5895	29	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-274	-915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	135.312464356408	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150691566	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713467_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.156	chrX	+	6108	29	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-117	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.518523384341	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150691723	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697163_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.16	chrX	+	14080	83	FSM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-29	528	-29	-528	multi-exon	FALSE	canonical	3	45	junction_16	155.992592374347	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150586293	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.160	chrX	+	5683	29	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	47	-913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	140.485215105595	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150691887	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701277_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.162	chrX	+	5679	27	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	1013	-531	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_16	127.23848920863	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150692853	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.163	chrX	+	5242	27	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	1078	-915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	152.512973548455	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150692918	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700416_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.164	chrX	+	5249	26	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	74851	916	1254	-916	3prime_fragment	FALSE	canonical	3	293	junction_5	112.119764537748	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCATGTGTGTCCCAGC	NA	False	NA	8	True	AATAAA	-14	NA	150693094	150717497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.165	chrX	+	5497	26	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	1338	-532	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.710570688476	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150693178	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150693252_150695204_150695244_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.166	chrX	+	5642	24	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	78693	525	5096	-525	3prime_fragment	FALSE	canonical	3	293	junction_3	112.876130310845	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150696936	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.167	chrX	+	5049	24	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	78896	915	5299	-915	3prime_fragment	FALSE	canonical	3	293	junction_3	112.876130310845	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150697139	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.169	chrX	+	5364	22	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-5243	-11	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_11	126.738540296044	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAACAATCCCAAGTA	NA	False	NA	-7	True	AATAAA	-10	NA	150699034	150718402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.17	chrX	+	14029	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-24	-529	intron_retention	FALSE	canonical	3	45	junction_16	156.163102189427	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586298	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.170	chrX	+	4888	22	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	80791	532	-5243	-532	3prime_fragment	FALSE	canonical	3	293	junction_1	107.559465175097	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150699034	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.171	chrX	+	4601	21	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-4308	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	145.273698583054	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150699969	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714741_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.173	chrX	+	1097	1	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-4120	-4354	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGTCTTCTTTTA	NA	False	NA	NA	False	AATAGA	-13	NA	150700157	150701254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150700200_150701300
ES.37842.174	chrX	+	4276	19	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-3651	-526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.841183139539	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	30	True	AATAAA	-19	NA	150700626	150717887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150700650_150701277_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.175	chrX	+	6577	16	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-3388	-8	intron_retention	FALSE	canonical	3	366	junction_2	84.7782991100907	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATCCCAAGTAGTA	NA	False	NA	-4	True	AATAAA	-13	NA	150700889	150718405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150707758_150710626_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.177	chrX	+	3717	18	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-2819	-911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	148.874020730425	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150701458	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711118_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.178	chrX	+	7784	10	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-2678	-914	intron_retention	FALSE	canonical	3	366	junction_1	84.4245590621562	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTGTGTCCCAGCTG	NA	False	NA	10	True	AATAAA	-16	NA	150701599	150717499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150707758_150710626_150711395_150711758_150712481_150713058_150713347_150713459_150713566_150714734_150716127_150717276
ES.37842.179	chrX	+	3222	17	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	84326	913	-1708	-913	3prime_fragment	FALSE	canonical	3	344	junction_6	88.4742194088199	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150702569	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.18	chrX	+	13893	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-21	-911	intron_retention	FALSE	canonical	0	0	junction_54	158.47748903365	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586301	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690274_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.180	chrX	+	3558	17	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1707	-531	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_6	121.356123017135	774	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150702570	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.181	chrX	+	5151	16	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1669	0	intron_retention	FALSE	canonical	3	366	junction_1	78.2814296127902	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTAGTACTTTCTTT	NA	False	NA	4	True	AATAAA	-21	NA	150702608	150718413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.182	chrX	+	3758	11	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-1096	-528	intron_retention	FALSE	canonical	3	472	junction_4	65.3088049193981	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150706157	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.183	chrX	+	2031	12	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-781	-915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	178.398152530922	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150706472	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150706603_150707657_150707758_150710626_150710786_150711118_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.184	chrX	+	5371	5	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	2462	-531	intron_retention	FALSE	canonical	3	474	junction_1	70.7495583025081	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150709715	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150711395_150711758_150713347_150713459_150713566_150714734_150716127_150717276
ES.37842.185	chrX	+	3592	7	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	3245	-527	intron_retention	FALSE	canonical	3	472	junction_1	63.2051334061474	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTCACAACGGAGTTT	NA	False	NA	29	True	AATAAA	-18	NA	150710498	150717886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150711877_150712339_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.186	chrX	+	1332	6	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	94592	913	5582	-913	3prime_fragment	FALSE	canonical	3	567	junction_3	37.6063824370279	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150712835	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.187	chrX	+	823	5	ISM	ENSMUSG00000025261.19	ENSMUST00000112622.8	14168	81	95214	913	6204	-913	3prime_fragment	FALSE	canonical	3	567	junction_2	41.2454542949887	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150713457	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.19	chrX	+	4515	25	FSM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	-23	518	-3	-3	multi-exon	FALSE	canonical	3	76	junction_1	19.9095175453573	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCCCATTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	150586319	150656026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.2	chrX	+	13707	84	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-10	-910	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	157.276717102335	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCCCAGCTGCCCA	NA	False	NA	14	True	AATAAA	-20	NA	150583868	150717503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150583943_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.20	chrX	+	14236	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-3	-532	intron_retention	FALSE	canonical	3	7	junction_44	157.835075831461	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150586319	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.21	chrX	+	13987	85	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-3	-913	intron_retention	FALSE	canonical	3	7	junction_45	159.732029621013	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586319	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.22	chrX	+	13670	83	FSM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-3	912	-3	-912	multi-exon	FALSE	canonical	3	45	junction_16	155.992592374347	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586319	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.23	chrX	+	13997	82	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-525	intron_retention	FALSE	canonical	3	15	junction_1	162.699602008816	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586320	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.24	chrX	+	13968	85	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-915	intron_retention	FALSE	canonical	0	0	junction_59	160.214069432799	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150586320	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692950_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.25	chrX	+	4286	24	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-2	62381	-2	3	5prime_fragment	FALSE	canonical	3	45	junction_16	23.5043333494141	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTTTGTCTTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	150586320	150656032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.27	chrX	+	3054	24	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	-2	63613	-2	-394	5prime_fragment	FALSE	canonical	3	45	junction_16	23.5043333494141	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCGTGTAGTTTTG	NA	False	NA	NA	False	AGTAAA	-22	NA	150586320	150654800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.28	chrX	+	13213	80	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-913	intron_retention	FALSE	canonical	0	0	junction_75	157.560098838616	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586320	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713467_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.29	chrX	+	13777	84	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-912	intron_retention	FALSE	canonical	3	17	junction_3	158.555705489771	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586320	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.3	chrX	+	14833	89	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-5	-520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	163.406925244848	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAACGGAGTTTTTTTCAA	NA	False	NA	36	True	AATAAA	-25	NA	150583873	150717893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150583943_150584149_150584363_150586171_150586379_150587441_150587537_150589267_150589404_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.30	chrX	+	17202	82	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-915	intron_retention	FALSE	non_canonical	0	0	junction_55	159.761069886575	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150586320	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692583_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.31	chrX	+	4412	25	NIC	ENSMUSG00000025261.19	novel	4473	25	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	10	junction_1	36.2209414182213	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCCCATTTTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	150586320	150656026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.32	chrX	+	13636	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-912	intron_retention	FALSE	canonical	3	26	junction_42	158.247605291855	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586320	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.33	chrX	+	14111	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-533	intron_retention	FALSE	canonical	3	17	junction_3	158.659746255989	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCACTTTTCACAACG	NA	False	NA	23	True	AATAAA	-12	NA	150586320	150717880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.34	chrX	+	13663	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-912	intron_retention	FALSE	canonical	3	26	junction_42	157.753488541257	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586320	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.36	chrX	+	6533	35	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-913	intron_retention	TRUE	non_canonical	0	0	junction_7	182.441830801759	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586320	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626140_150692424_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.37	chrX	+	4252	24	ISM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	-22	1743	-2	-393	intron_retention	FALSE	canonical	3	76	junction_1	20.0063317009527	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGCGTGTAGTTTTGC	NA	False	NA	NA	False	AGTAAA	-23	NA	150586320	150654801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454
ES.37842.38	chrX	+	14286	84	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-529	intron_retention	FALSE	canonical	3	75	junction_28	155.568509150593	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586320	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.4	chrX	+	14276	85	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-3	-529	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	158.165116513195	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150583875	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150583943_150584149_150584363_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.40	chrX	+	14526	86	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-2	-533	intron_retention	FALSE	canonical	3	15	junction_1	159.873615309007	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCACTTTTCACAACG	NA	False	NA	23	True	AATAAA	-12	NA	150586320	150717880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.41	chrX	+	14237	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-1	-526	intron_retention	FALSE	canonical	3	26	junction_43	157.411097886531	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	30	True	AATAAA	-19	NA	150586321	150717887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.42	chrX	+	14217	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-1	-525	intron_retention	FALSE	canonical	3	42	junction_28	156.202078324053	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586321	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.43	chrX	+	14070	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	0	-525	intron_retention	FALSE	canonical	0	0	junction_72	159.314358693905	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586322	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150645912_150645961_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705890_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.44	chrX	+	14329	85	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	0	-529	intron_retention	FALSE	non_canonical	0	0	junction_9	159.871137520957	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586322	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636412_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.45	chrX	+	13623	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	0	-911	intron_retention	FALSE	canonical	3	45	junction_16	156.163102189427	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586322	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.46	chrX	+	14018	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	3	-531	intron_retention	FALSE	canonical	3	42	junction_27	156.496879203631	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150586325	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.47	chrX	+	13594	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	4	-909	intron_retention	FALSE	canonical	3	42	junction_27	156.660480805728	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCAGCTGCCCAT	NA	False	NA	15	True	AATAAA	-21	NA	150586326	150717504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.48	chrX	+	13617	80	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	4	-529	intron_retention	FALSE	canonical	3	27	junction_51	161.376820294939	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586326	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.49	chrX	+	13951	86	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	8	-912	intron_retention	FALSE	canonical	2	6	junction_22	163.089282445055	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586330	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150645912_150645961_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.5	chrX	+	2932	21	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	119	4331	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.0625894494238	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTCTGGCCTTTTAGG	NA	False	NA	NA	False	AGTAAA	-23	NA	150583997	150648051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150584363_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557
ES.37842.51	chrX	+	13616	82	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	9	-912	intron_retention	FALSE	canonical	3	10	junction_1	163.946407799597	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586331	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.52	chrX	+	14744	82	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-8	-913	intron_retention	FALSE	non_canonical	0	0	junction_33	161.600602607148	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586334	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666319_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673787_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.53	chrX	+	14021	85	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-7	-911	intron_retention	FALSE	canonical	3	10	junction_1	157.620501989406	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586335	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.54	chrX	+	13880	84	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	1	-912	intron_retention	FALSE	canonical	3	75	junction_28	155.568509150593	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTGTCCCAGCTGCC	NA	False	NA	12	True	AATAAA	-18	NA	150586343	150717501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.56	chrX	+	3264	25	FSM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	3	1743	3	-393	multi-exon	FALSE	canonical	3	76	junction_1	19.9095175453573	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTGCGTGTAGTTTTGC	NA	False	NA	NA	False	AGTAAA	-23	NA	150586345	150654801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.57	chrX	+	14119	80	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_51	161.376820294939	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATCCCAAGTAGTA	NA	False	NA	-4	True	AATAAA	-13	NA	150586345	150718405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.58	chrX	+	13521	82	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	3	-915	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_21	163.28086836892	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150586345	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150645912_150645961_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.59	chrX	+	14045	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	18	-532	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	159.133475145516	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150586360	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.6	chrX	+	14429	85	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	158	-529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_62	159.974475359164	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150584036	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150584363_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697434_150698620_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.62	chrX	+	13599	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	24	-913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_56	158.707772960546	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586366	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692588_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.63	chrX	+	9838	65	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	24	-531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_57	149.930657800323	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150586366	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690285_150711839_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.64	chrX	+	14159	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	24	-529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_64	159.797505771904	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586366	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150699989_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.65	chrX	+	3142	25	NIC	ENSMUSG00000025261.19	novel	4473	25	NA	NA	25	-391	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	36.2209414182213	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGTGTAGTTTTGCCA	NA	False	NA	NA	False	AGTAAA	-25	NA	150586367	150654803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586566_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ES.37842.66	chrX	+	14242	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	34	-529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_65	157.57868771471	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586376	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700416_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.67	chrX	+	13997	83	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	71	-532	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	160.425365939688	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150586413	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636560_150639539_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.68	chrX	+	5608	27	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	80	-525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.714330551781	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586422	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618275_150697264_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.69	chrX	+	13779	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	95	-913	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_43	157.295553436161	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150586437	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.7	chrX	+	13722	83	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	188	-910	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	157.135049260588	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCCCAGCTGCCCA	NA	False	NA	14	True	AATAAA	-20	NA	150584066	150717503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150584363_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.70	chrX	+	14194	85	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	102	-533	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	158.621579728471	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCACTTTTCACAACG	NA	False	NA	23	True	AATAAA	-12	NA	150586444	150717880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589715_150589857_150618219_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.71	chrX	+	3437	25	NIC	ENSMUSG00000025261.19	novel	3710	26	NA	NA	-23	-1124	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	42.5718143259129	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGATCCCTATTGTTTT	NA	False	NA	NA	False	AATACA	-14	NA	150586630	150654070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586799_150587441_150587537_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454
ES.37842.72	chrX	+	14089	84	NIC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-7	-531	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	158.20406001251	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150586646	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586799_150589271_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.73	chrX	+	14190	84	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	-3	-529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.954149180158	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150586650	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586799_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692585_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.74	chrX	+	3494	28	NIC	ENSMUSG00000025261.19	novel	3710	26	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.7290271642056	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAATCTCAGAGTCACC	NA	False	NA	NA	False	ATTAAA	-17	NA	150586653	150656895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150586799_150587441_150587537_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150656672
ES.37842.76	chrX	+	14024	86	NNC	ENSMUSG00000025261.19	novel	14168	81	NA	NA	1	-911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	164.30602892733	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150586658	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586799_150587441_150587537_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659292_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669086_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692588_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.77	chrX	+	4806	1	Intergenic	novelGene_31011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	252	False	NA	NA	False	NA	NA	NA	150594194	150599000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150594200_150599000
ES.37842.78	chrX	+	13531	81	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-26	-528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	163.351796362942	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTCACAACGGAGTT	NA	False	NA	28	True	AATAAA	-17	NA	150618217	150717885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150618289_150619217_150619326_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657736_150659304_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150669978_150672672_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.79	chrX	+	13244	77	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	5576	-529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_70	162.258992383838	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150623819	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712333_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.8	chrX	+	14274	84	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-44	-525	intron_retention	FALSE	canonical	0	0	junction_42	162.293651157341	822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586194	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586566_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675099_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.80	chrX	+	12858	74	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-4285	-532	combination_of_known_splicesites	FALSE	canonical	3	27	junction_45	162.405982444602	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCACTTTTCACAACGG	NA	False	NA	24	True	AATAAA	-13	NA	150635516	150717881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.83	chrX	+	11848	68	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	1000	-915	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	158.187164086442	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150640801	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.84	chrX	+	12440	69	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	1001	-535	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_29	161.091172013528	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAACTCACTTTTCACAA	NA	False	NA	21	True	AATAAA	-10	NA	150640802	150717878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.86	chrX	+	11460	64	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-1901	-915	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	159.859648066261	813	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATGTGTGTCCCAGCT	NA	False	NA	9	True	AATAAA	-15	NA	150645656	150717498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686832_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.87	chrX	+	10918	57	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	6918	-526	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_19	166.326470827584	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCACAACGGAGTTTT	NA	False	NA	30	True	AATAAA	-19	NA	150654475	150717887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.88	chrX	+	10521	58	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	72965	911	-6294	-911	3prime_fragment	FALSE	canonical	3	75	junction_2	153.801051075044	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCCCAGCTGCCC	NA	False	NA	13	True	AATAAA	-19	NA	150659287	150717502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.89	chrX	+	10736	57	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-5749	-525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	163.371726775761	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150659832	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701928_150702582_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.9	chrX	+	14428	86	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-12	-525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.160747016981	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCACAACGGAGTTTTT	NA	False	NA	31	True	AATAAA	-20	NA	150586226	150717888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150586379_150587441_150587537_150589267_150589404_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.91	chrX	+	2981	3	ISM	ENSMUSG00000025261.19	ENSMUST00000138023.8	3597	24	18649	7404	-3770	447	intron_retention	FALSE	canonical	3	125	junction_1	10	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGACCAAAAAGG	NA	False	NA	NA	False	ACTAAA	-31	NA	150661811	150666743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150661906_150663495_150663713_150664073
ES.37842.93	chrX	+	10263	54	ISM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	77750	529	-1509	-529	3prime_fragment	FALSE	canonical	3	119	junction_1	150.133444854219	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150664072	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.94	chrX	+	10105	53	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	-1501	-531	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_35	159.57556848156	783	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTTTCACAACGGA	NA	False	NA	25	True	AATAAA	-14	NA	150664080	150717882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.96	chrX	+	6589	36	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	9	-3522	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_12	78.6309073573282	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTGTTCTTTACAATT	NA	False	NA	NA	False	AATAAA	-17	NA	150665590	150702086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376
ES.37842.97	chrX	+	9993	53	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	46	-529	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_12	153.058430463972	782	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTTTCACAACGGAGT	NA	False	NA	27	True	AATAAA	-16	NA	150665627	150717884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677922_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37842.99	chrX	+	8939	49	NNC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	621	-913	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	164.820098685068	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTGTCCCAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	150666202	150717500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679561_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706558_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ES.37843.1	chrX	+	1202	4	ISM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	6	2	6	-2	intron_retention	FALSE	canonical	3	1359	junction_1	231.500899926257	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTGTGCAGTCTTGTG	NA	False	NA	14	True	AATAAA	-14	NA	150784846	150787436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648
ES.37843.2	chrX	+	944	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	22	-4	22	4	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGTCTTGTGTGCTAG	NA	False	NA	20	True	AATAAA	-20	NA	150784862	150787442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ES.37843.3	chrX	+	921	6	NNC	ENSMUSG00000025260.11	novel	962	6	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	704.841145223518	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTGTGCAGTCTTGTG	NA	False	NA	14	True	AATAAA	-14	NA	150784878	150787436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786958_150787126
ES.37843.4	chrX	+	891	6	NNC	ENSMUSG00000025260.11	novel	962	6	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	698.008882464973	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTGTGCAGTCTTGTG	NA	False	NA	14	True	AATAAA	-14	NA	150784896	150787436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150784931_150785273_150785439_150786356_150786522_150786661_150786778_150786857_150786967_150787134
ES.37843.6	chrX	+	853	6	NNC	ENSMUSG00000025260.11	novel	962	6	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	669.532254637519	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTGTGCAGTCTTGTG	NA	False	NA	14	True	AATAAA	-14	NA	150784897	150787436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150784931_150785273_150785417_150786384_150786522_150786648_150786778_150786857_150786967_150787134
ES.37844.1	chrX	+	4658	26	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	-759	-709	intron_retention	TRUE	non_canonical	0	0	junction_1	180.294363749952	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCCAAGGGAATACA	NA	False	NA	32	True	AATAAA	-36	NA	150798664	150844981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150798703_150798785_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.10	chrX	+	4674	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	22	-5	22	5	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCAATTGTGTATGAT	NA	False	NA	NA	False	AATAAA	-20	NA	150799445	150845695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.12	chrX	+	3637	23	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	22	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	217.8537685302	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799445	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820487_150820593_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.14	chrX	+	3642	23	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	23	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	215.939921243796	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799446	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830974_150841783_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.15	chrX	+	3954	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	27	-728	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	182.090365043477	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAGCCTAATCTAAAT	NA	False	NA	13	True	AATAAA	-17	NA	150799450	150844962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830835_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.17	chrX	+	5608	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	40	-957	40	957	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGAGCAAGCTTATGT	NA	False	NA	NA	False	NA	NA	NA	150799463	150846647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.19	chrX	+	4227	27	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	43	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	263.605959854867	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799466	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150821178_150821408_150821727_150821805_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.20	chrX	+	3863	16	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	44	19985	44	4651	5prime_fragment	FALSE	canonical	3	535	junction_3	107.782414562344	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	150799467	150825705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322
ES.37844.21	chrX	+	3610	23	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	46	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	215.939921243796	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799469	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841783_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.23	chrX	+	3692	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	46	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	231.18009078422	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799469	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812287_150816694_150816881_150816975_150817156_150819097_150819167_150819379_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.24	chrX	+	4222	24	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	47	-724	intron_retention	FALSE	canonical	0	0	junction_16	187.528195737594	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799470	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829442_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.25	chrX	+	3912	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	47	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	182.090365043477	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799470	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830049_150830865_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.28	chrX	+	3792	16	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	48	1440	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	211.003907283465	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGGTAGGATGGA	NA	False	NA	NA	False	NA	NA	NA	150799471	150822494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150821178
ES.37844.29	chrX	+	3933	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	48	-722	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	179.101998988472	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTAATCTAAATTTGATT	NA	False	NA	19	True	AATAAA	-23	NA	150799471	150844968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809221_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.3	chrX	+	3673	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	-5	-721	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATCTAAATTTGATTC	NA	False	NA	20	True	AATAAA	-24	NA	150799418	150844969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.31	chrX	+	3768	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	58	-724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	181.629411317538	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799481	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805810_150806054_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.32	chrX	+	2400	18	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	59	-727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	208.231522066201	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799482	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809344_150819212_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.33	chrX	+	3927	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	61	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	179.361594543599	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799484	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816670_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.34	chrX	+	3863	21	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	275.519776967099	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAGCTTCAATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	150799484	150845690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817127_150819121_150819245_150819336_150819475_150820365_150820483_150820586_150820651_150829971_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.35	chrX	+	3894	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	62	-727	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	184.012152376473	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799485	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841926_150842355_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.39	chrX	+	3818	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	66	-724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	182.518263926289	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799489	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817092_150819116_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.4	chrX	+	3967	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	10	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	183.736601930287	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799433	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816962_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.40	chrX	+	2060	12	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	66	26482	66	0	5prime_fragment	FALSE	canonical	3	535	junction_3	120.372768123796	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAGAACGTTT	NA	False	NA	NA	False	NA	NA	NA	150799489	150819208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097
ES.37844.43	chrX	+	5853	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	69	-1231	69	1231	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATGAGTGGTTTTGCC	NA	False	NA	NA	False	TTTAAA	-17	NA	150799492	150846921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.45	chrX	+	3760	25	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	152	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	233.877961855466	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150799575	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817100_150819097_150819245_150819336_150819475_150820365_150820487_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.46	chrX	+	3884	25	NNC	ENSMUSG00000041133.12	novel	617	3	NA	NA	734	-724	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	179.431930570713	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150800157	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150800288_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.47	chrX	+	3583	23	NNC	ENSMUSG00000041133.12	novel	617	3	NA	NA	736	-721	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.180388352766	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATCTAAATTTGATTC	NA	False	NA	20	True	AATAAA	-24	NA	150800159	150844969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150800288_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.49	chrX	+	2579	17	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	-7168	-727	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	205.624420591889	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150812274	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841630_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.50	chrX	+	1951	14	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	19672	727	-347	-727	3prime_fragment	FALSE	canonical	3	716	junction_1	56.2351361031907	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150819095	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.51	chrX	+	1579	13	NNC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	962	-727	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	231.015872470558	686	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	NA	False	NA	14	True	AATAAA	-18	NA	150820404	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150820483_150820586_150820694_150824322_150824394_150824439_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.52	chrX	+	1548	11	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	21160	729	1141	-729	3prime_fragment	FALSE	canonical	3	738	junction_6	52.40887329451	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGAGCCTAATCTAAA	NA	False	NA	12	True	AATAAA	-16	NA	150820583	150844961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.53	chrX	+	3897	1	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	2396	4681	mono-exon	FALSE	NA	NA	NA	NA	NA	648	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTTTAATGCCTAAC	NA	False	NA	NA	False	AAAAAG	-11	NA	150821838	150825735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150821800_150825700
ES.37844.54	chrX	+	6182	5	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	-4561	-727	intron_retention	FALSE	canonical	3	812	junction_3	33.5438146310166	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTAATCTAAATT	9974	False	NA	14	True	AATAAA	-18	NA	150836901	150844963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.8	chrX	+	3789	24	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	21	-724	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	184.50908656371	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCCTAATCTAAATTTGA	NA	False	NA	17	True	AATAAA	-21	NA	150799444	150844966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ES.37844.9	chrX	+	3814	19	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	22	13967	22	792	5prime_fragment	FALSE	canonical	3	535	junction_3	103.552396232207	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGTATGCAGTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	150799445	150831723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853
ES.37845.1	chrX	-	3607	2	Antisense	novelGene_ENSMUSG00000025261.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACCTAAAATCACAGCCA	1248	False	NA	NA	False	NA	NA	NA	150593530	150589861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150591102_150591163
ES.37845.2	chrX	-	3517	2	Antisense	novelGene_ENSMUSG00000025261.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACCTAAAATCACAGCCA	1337	False	NA	NA	False	NA	NA	NA	150593441	150589861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150591092_150591154
ES.37846.1	chrX	-	178	1	Intergenic	novelGene_31012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAGAT	NA	False	NA	NA	False	NA	NA	NA	150610104	150609926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150609900_150610100
ES.37847.1	chrX	-	178	2	Antisense	novelGene_ENSMUSG00002076803.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTGGTATTTG	9028	False	NA	NA	False	NA	NA	NA	150805264	150678657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150678675_150805103
ES.37847.2	chrX	-	1482	8	NNC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.9323706252388	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799290	150787577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792613_150798776_150798865_150799158
ES.37847.3	chrX	-	1546	8	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	33.0126753640761	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799290	150787577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799119
ES.37847.4	chrX	-	1569	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	-61	0	-61	0	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799352	150787577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
ES.37847.5	chrX	-	1596	4	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	8441	0	intron_retention	FALSE	canonical	3	95	junction_1	14.3527000944073	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150790825	150787577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_150787807_150787914_150788854_150790211_150790557_150790742
ES.37847.6	chrX	-	3586	5	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	83	junction_4	6.48074069840786	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTGTGTCGTAAGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	150799293	150787578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_150787807_150787914_150790557_150790742_150790825_150792520_150792638_150798776
ES.37847.7	chrX	-	290	1	Intergenic	novelGene_31013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTAACCTGA	9029	False	NA	NA	False	NA	NA	NA	150805263	150804973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150805000_150805300
ES.37847.8	chrX	-	178	1	Intergenic	novelGene_31014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9028	False	NA	NA	False	NA	NA	NA	150805264	150805086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150805100_150805300
ES.37848.1	chrX	-	3441	2	Antisense	novelGene_ENSMUSG00000041133.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150839043	150835488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150837831_150837944
ES.37849.1	chrX	-	176	1	Intergenic	novelGene_31015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAACAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	150870336	150870160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_150870200_150870300
ES.3785.1	chr10	+	4068	3	FSM	ENSMUSG00000031294.10	ENSMUST00000033651.4	2133	3	-1939	4	-372	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAAATCGTGGACCTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	116800239	116805006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_116802316_116802442_116802571_116803142
ES.37850.1	chrX	+	158	1	Intergenic	novelGene_31016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	150923599	150923757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150923600_150923800
ES.37851.1	chrX	+	6067	14	FSM	ENSMUSG00000041115.17	ENSMUST00000112604.8	5967	14	-100	0	-96	0	multi-exon	FALSE	canonical	1	1	junction_2	2.94726831702585	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCCTCTGCCTCCTA	NA	False	NA	NA	False	CATAAA	-15	NA	150927167	151008232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150928176_150949929_150949960_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005917
ES.37851.10	chrX	+	2639	8	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	24137	8216	24137	-8215	internal_fragment	FALSE	canonical	2	3	junction_5	2.43276948084663	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGCTCTGGTTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	150986096	151000016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336
ES.37851.100	chrX	+	6374	24	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-7	37	intron_retention	FALSE	canonical	3	451	junction_22	44.3074411174273	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTATTTTAATTTTAT	NA	False	NA	17	True	AAAAAG	-23	NA	151016242	151056805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049938_151050078_151050227_151050890_151050997_151051760_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.101	chrX	+	10993	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	18	-4562	-7	4562	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTCATGTATACTCT	NA	False	NA	NA	False	AATAAA	-13	NA	151016242	151062093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.102	chrX	+	5707	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-7	33	intron_retention	FALSE	canonical	0	0	junction_11	132.165556783906	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151016242	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036606_151036701_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.103	chrX	+	5563	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-7	-11	intron_retention	FALSE	canonical	0	0	junction_23	113.516603326426	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016242	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054142_151054231_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.104	chrX	+	6064	24	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-7	-11	intron_retention	FALSE	canonical	3	498	junction_13	36.4854374450637	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016242	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151055271_151055704
ES.37851.105	chrX	+	3328	9	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-7	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	211.431874370919	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	NA	False	NA	12	True	NA	NA	NA	151016242	151057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151054318_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.107	chrX	+	5705	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-7	35	intron_retention	FALSE	canonical	0	0	junction_2	132.351326400607	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151016242	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020700_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.108	chrX	+	5627	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-5	33	intron_retention	FALSE	non_canonical	0	0	junction_26	113.516603326426	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151016244	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055756_151055827
ES.37851.11	chrX	+	3967	22	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-69	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	121.392823869761	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTGTTTCAACTAAAG	NA	False	NA	1	True	AAAAAG	-7	NA	151015946	151056789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053506_151056710
ES.37851.110	chrX	+	5475	28	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-4	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	145.240371219915	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCTATTTTAATTTTA	NA	False	NA	16	True	AAAAAG	-22	NA	151016245	151056804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046_151056165_151056241
ES.37851.111	chrX	+	10706	25	FSM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	-18	-5168	0	4405	multi-exon	FALSE	canonical	3	15	junction_2	115.294181396499	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTCTTTATTATTTCCT	NA	False	NA	10	True	AATAAA	-19	NA	151016249	151061936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.112	chrX	+	6210	24	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	0	-6	intron_retention	FALSE	canonical	1	6	junction_22	152.865880155416	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGCTCCTTTTGTGTCT	NA	False	NA	14	True	NA	NA	NA	151016249	151057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151055070_151055271_151055704
ES.37851.113	chrX	+	5661	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	0	99	intron_retention	FALSE	canonical	0	0	junction_23	133.057118357351	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	13	True	AATAAA	-16	NA	151016249	151056867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054136_151054231_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.116	chrX	+	4857	22	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	8764	-24	8764	24	3prime_fragment	FALSE	canonical	3	451	junction_20	46.0472004708409	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTCAACTAAAGCCT	NA	False	NA	4	True	AAAAAG	-10	NA	151025031	151056792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.117	chrX	+	5594	22	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	8807	2	8764	-2	3prime_fragment	FALSE	canonical	3	451	junction_20	46.0472004708409	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTTTTGTGTCTGCCT	NA	False	NA	18	True	NA	NA	NA	151025031	151057529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.118	chrX	+	5468	18	NIC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	8850	35	intron_retention	FALSE	canonical	3	451	junction_16	46.4136658076307	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151025117	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151054926_151055070_151055271_151055704
ES.37851.120	chrX	+	3975	16	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	13050	-14	intron_retention	FALSE	canonical	0	0	junction_3	239.939010769172	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATTTGTTCAAAAGG	NA	False	NA	7	True	AATAAA	-17	NA	151029317	151056750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151029410_151031423_151031544_151031657_151031817_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050762_151050997_151051760_151052120_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.121	chrX	+	4687	18	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	15198	309	15155	-309	3prime_fragment	FALSE	canonical	3	451	junction_16	48.4670187149384	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAATTTGGTGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	151031422	151057222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.122	chrX	+	1973	13	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	15502	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	159.76517055423	975	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151031769	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053464_151056710
ES.37851.123	chrX	+	4727	16	ISM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	20402	-767	-16384	0	3prime_fragment	FALSE	canonical	3	193	junction_14	101.676261842291	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTGTGTCTGCCTTC	NA	False	NA	20	True	NA	NA	NA	151036417	151057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.124	chrX	+	6368	14	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	25888	17	-10646	-13	3prime_fragment	FALSE	canonical	3	451	junction_12	53.9681036633468	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151042155	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.125	chrX	+	3080	3	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-9402	-5828	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	249	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151043399	151048724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151045053_151045158_151046325_151048463
ES.37851.126	chrX	+	4367	14	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	28707	5	-7870	-5	3prime_fragment	FALSE	canonical	3	451	junction_12	53.9681036633468	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCGCTCCTTTTGTGTCTG	NA	False	NA	15	True	NA	NA	NA	151044931	151057526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.127	chrX	+	3596	14	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-7792	37	intron_retention	FALSE	canonical	0	0	junction_1	205.740486849317	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTATTTTAATTTTAT	NA	False	NA	17	True	AAAAAG	-23	NA	151045009	151056805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151045053_151045124_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054861_151054926_151055070_151055271_151055704
ES.37851.128	chrX	+	6268	12	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	33358	-2242	-3219	2242	3prime_fragment	FALSE	canonical	3	451	junction_10	55.4180207585347	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGGGGTCTAAGTATGG	2237	False	NA	NA	False	AATAAA	-15	NA	151049582	151059773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.129	chrX	+	2711	12	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-2888	-13	intron_retention	FALSE	non_canonical	0	0	junction_8	195.478138110989	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	2568	False	NA	8	True	AATAAA	-18	NA	151049913	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054146_151054436_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.130	chrX	+	2821	9	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	34622	18	-1912	-14	3prime_fragment	FALSE	canonical	3	451	junction_7	56.3946750589096	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATTTGTTCAAAAGG	3544	False	NA	7	True	AATAAA	-17	NA	151050889	151056750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.131	chrX	+	2856	9	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-1889	33	intron_retention	FALSE	non_canonical	0	0	junction_3	194.16741326752	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	3567	False	NA	13	True	AAAAAG	-19	NA	151050912	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151050997_151051760_151052120_151052710_151052850_151053340_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.132	chrX	+	8064	8	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	35534	-4567	-1043	4567	3prime_fragment	FALSE	canonical	3	451	junction_6	58.8744773363862	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGTATACTCTAATTC	4413	False	NA	NA	False	AATAAA	-18	NA	151051758	151062098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.133	chrX	+	3492	7	NIC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-866	-8	intron_retention	FALSE	canonical	3	451	junction_5	60.6595691818969	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	4590	False	NA	12	True	NA	NA	NA	151051935	151057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151052120_151052710_151052850_151053347_151053528_151053689_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.134	chrX	+	2522	9	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-829	116	intron_retention	TRUE	canonical	0	0	junction_8	194.893520608049	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACATGTTTCTGAAGT	4627	False	NA	30	True	AATAAA	-33	NA	151051972	151056884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055774_151055887
ES.37851.136	chrX	+	4411	2	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-725	-13	intron_retention	FALSE	non_canonical	0	0	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	4731	False	NA	8	True	AATAAA	-18	NA	151052076	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151054590_151054853
ES.37851.137	chrX	+	3076	2	NIC	ENSMUSG00000025332.15	novel	756	4	NA	NA	-895	-8	intron_retention	FALSE	canonical	3	615	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	6668	False	NA	12	True	NA	NA	NA	151054013	151057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151055271_151055704
ES.37851.138	chrX	+	7068	4	ISM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	38009	-5164	-884	4397	3prime_fragment	FALSE	canonical	3	193	junction_2	202.560827626886	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGTATCTCTTTAT	6679	False	NA	2	True	AATAAA	-11	NA	151054024	151061928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.139	chrX	+	210	2	NNC	ENSMUSG00000025332.15	novel	773	3	NA	NA	-883	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTATTTTAATTTTAT	6680	False	NA	17	True	AAAAAG	-23	NA	151054025	151056805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151054087_151056656
ES.37851.14	chrX	+	6520	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	3	3	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCCTTCTTT	NA	False	NA	23	True	NA	NA	NA	151016018	151057534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.140	chrX	+	6546	2	ISM	ENSMUSG00000025332.15	ENSMUST00000155793.2	756	4	44	-5540	44	4401	intron_retention	FALSE	canonical	3	615	junction_1	0	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTATCTCTTTATTATT	7607	False	NA	6	True	AATAAA	-15	NA	151054952	151061932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151055271_151055704
ES.37851.141	chrX	+	177	1	Intergenic	novelGene_31021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGC	NA	False	NA	NA	False	NA	NA	NA	151064310	151064487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151064300_151064500
ES.37851.15	chrX	+	6649	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	-193	-7	16	7	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCCTTCTTTGACT	NA	False	NA	27	True	NA	NA	NA	151016031	151057538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.16	chrX	+	6009	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	17	-126	17	122	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	NA	False	NA	36	True	AATAAA	-39	NA	151016032	151056890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.17	chrX	+	6026	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	-192	615	17	148	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAGCAGAACCTTC	NA	False	NA	62	True	NA	NA	NA	151016032	151056916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.18	chrX	+	6649	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	22	-771	22	4	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTCTGCCTTCTTTG	NA	False	NA	24	True	NA	NA	NA	151016037	151057535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.19	chrX	+	5587	27	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-8	33	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	124.800053102705	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151016216	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151055898_151056046
ES.37851.2	chrX	+	1780	3	NIC	ENSMUSG00000041115.17	novel	5967	14	NA	NA	-96	6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	1	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGATGTATGTTCCACC	NA	False	NA	NA	False	AATAAA	-18	NA	150927167	150977603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150928176_150949929_150949960_150976861
ES.37851.20	chrX	+	1649	5	NNC	ENSMUSG00000025332.15	novel	1872	7	NA	NA	-8	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	227.420865357601	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016216	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023131_151055902
ES.37851.21	chrX	+	5679	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-8	114	intron_retention	FALSE	canonical	3	39	junction_21	128.810153153995	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAACATGTTTCTGAA	NA	False	NA	28	True	AATAAA	-31	NA	151016216	151056882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.22	chrX	+	6231	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	-8	226	-8	-226	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGTGTCACTGTTAAAC	NA	False	NA	NA	False	AATGAA	-19	NA	151016216	151057305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.23	chrX	+	5659	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-8	35	intron_retention	FALSE	canonical	1	6	junction_23	114.076332875063	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151016216	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151055070_151055271_151055704
ES.37851.25	chrX	+	5703	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	205	-8	-4	4	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGCAAAACAAA	NA	False	NA	-16	True	AATAAA	-39	NA	151016220	151056772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.26	chrX	+	6011	24	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-4	-14	intron_retention	FALSE	canonical	3	164	junction_4	90.3161010542463	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATTTGTTCAAAAGG	NA	False	NA	7	True	AATAAA	-17	NA	151016220	151056750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.27	chrX	+	5573	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	113.516603326426	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016222	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055831_151055928
ES.37851.28	chrX	+	5632	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-2	24	intron_retention	FALSE	canonical	0	0	junction_11	132.165556783906	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTCAACTAAAGCCT	NA	False	NA	4	True	AAAAAG	-10	NA	151016222	151056792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036513_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.29	chrX	+	5601	25	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	-1	40	intron_retention	FALSE	canonical	3	15	junction_2	136.110549176845	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTTTAATTTTATTTT	NA	False	NA	20	True	AAAAAG	-26	NA	151016223	151056808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.3	chrX	+	3927	5	ISM	ENSMUSG00000041115.17	ENSMUST00000168786.8	5993	15	-53	14198	-53	7033	5prime_fragment	FALSE	canonical	1	1	junction_2	3.60555127546399	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTTTCTTGTGCTGCG	NA	False	NA	NA	False	ATTAAA	-13	NA	150927210	150994033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_150928176_150949929_150949960_150985903_150986166_150986927_150987330_150991765
ES.37851.30	chrX	+	5668	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-1	119	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTTTCTGAAGTGCA	NA	False	NA	33	True	AATAAA	-36	NA	151016223	151056887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.32	chrX	+	6404	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_26	129.792489138187	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGTCTGCCTTCT	NA	False	NA	21	True	NA	NA	NA	151016224	151057532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151055756_151055810
ES.37851.35	chrX	+	5634	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	1	24	intron_retention	FALSE	non_canonical	0	0	junction_26	113.516603326426	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTCAACTAAAGCCT	NA	False	NA	4	True	AAAAAG	-10	NA	151016225	151056792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151056456_151056530
ES.37851.37	chrX	+	7442	20	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	2	-13	intron_retention	FALSE	canonical	3	164	junction_4	92.1083909243363	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016226	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052850_151053347
ES.37851.38	chrX	+	5513	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	2	4	intron_retention	TRUE	non_canonical	0	0	junction_26	113.516603326426	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGCAAAACAAA	NA	False	NA	-16	True	AATAAA	-39	NA	151016226	151056772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151056537_151056711
ES.37851.39	chrX	+	5314	24	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	116.133665900063	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	NA	False	NA	12	True	NA	NA	NA	151016226	151057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054550_151056519
ES.37851.4	chrX	+	159	2	Intergenic	novelGene_31018	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATAAATAAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	150958989	151041971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150959130_151041952
ES.37851.40	chrX	+	6122	24	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	2	-11	intron_retention	FALSE	canonical	3	39	junction_20	112.715745659028	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016226	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.42	chrX	+	10847	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	3	4404	intron_retention	FALSE	canonical	3	164	junction_4	86.7100916848783	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTCTTTATTATTTCC	NA	False	NA	9	True	AATAAA	-18	NA	151016227	151061935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.43	chrX	+	6324	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	3	7	intron_retention	FALSE	canonical	3	39	junction_21	128.810153153995	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCCTTCTTTGACT	NA	False	NA	27	True	NA	NA	NA	151016227	151057538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.44	chrX	+	6306	27	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	124.800053102705	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTGTGTCTGCCTTC	NA	False	NA	20	True	NA	NA	NA	151016227	151057531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151055898_151056046
ES.37851.45	chrX	+	6353	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_11	115.647782512247	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTCCTTTTGTGTCTGC	NA	False	NA	16	True	NA	NA	NA	151016227	151057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036513_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.48	chrX	+	6550	22	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	5	116	intron_retention	FALSE	canonical	3	498	junction_13	37.7328597840528	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACATGTTTCTGAAGT	NA	False	NA	30	True	AATAAA	-33	NA	151016229	151056884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151055271_151055704
ES.37851.49	chrX	+	5645	27	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	6	114	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	107.655900439355	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAACATGTTTCTGAA	NA	False	NA	28	True	AATAAA	-31	NA	151016230	151056882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046
ES.37851.5	chrX	+	228	1	Intergenic	novelGene_31017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCATGGAGCCGCTG	NA	False	NA	NA	False	NA	NA	NA	150958989	150959217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_150959000_150959200
ES.37851.50	chrX	+	5527	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	6	916	6	-149	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGCAGGGCTGCCTATG	NA	False	NA	NA	False	AATGAA	-11	NA	151016230	151056615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.51	chrX	+	5515	26	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	6	122	combination_of_known_junctions	FALSE	canonical	3	33	junction_25	145.555179914698	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	NA	False	NA	36	True	AATAAA	-39	NA	151016230	151056890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046
ES.37851.53	chrX	+	6489	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	6	-8	intron_retention	FALSE	canonical	1	1	junction_7	148.934906586737	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCGCTCCTTTTGTGT	NA	False	NA	12	True	NA	NA	NA	151016230	151057523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028328_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.55	chrX	+	6315	25	FSM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	-36	-759	7	-4	multi-exon	FALSE	canonical	3	15	junction_2	115.294181396499	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTCCTTTTGTGTCTGC	NA	False	NA	16	True	NA	NA	NA	151016231	151057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.56	chrX	+	5384	26	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	7	-13	combination_of_known_junctions	FALSE	canonical	3	33	junction_25	157.833512284305	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016231	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151055898_151056046
ES.37851.57	chrX	+	5680	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	7	4	intron_retention	FALSE	canonical	3	164	junction_4	86.7100916848783	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGCAAAACAAA	NA	False	NA	-16	True	AATAAA	-39	NA	151016231	151056772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.58	chrX	+	5653	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	7	-16	intron_retention	FALSE	canonical	2	5	junction_23	112.906361202547	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATTAATTTGTTCAAAA	NA	False	NA	5	True	AATAAA	-15	NA	151016231	151056748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054861_151054926_151055070_151055271_151055704
ES.37851.59	chrX	+	6439	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	7	-6	intron_retention	FALSE	canonical	2	5	junction_23	129.541122428362	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGCTCCTTTTGTGTCT	NA	False	NA	14	True	NA	NA	NA	151016231	151057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054861_151054935_151055070_151055271_151055704
ES.37851.6	chrX	+	846	2	FSM	ENSMUSG00000041115.17	ENSMUST00000128724.8	863	2	19	-2	19	2	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCTGATGTATGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	150961978	150977599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_150962087_150976861
ES.37851.60	chrX	+	5043	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	7	1399	7	-260	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATCAAGCCTGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	151016231	151056132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.61	chrX	+	6323	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	8	-4	intron_retention	FALSE	canonical	3	15	junction_2	132.651165080531	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCTCCTTTTGTGTCTGC	NA	False	NA	16	True	NA	NA	NA	151016232	151057527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.62	chrX	+	5388	26	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	8	-14	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	148.83743615099	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAATTTGTTCAAAAGG	NA	False	NA	7	True	AATAAA	-17	NA	151016232	151056750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046
ES.37851.64	chrX	+	5511	24	NIC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	9	95	intron_retention	FALSE	canonical	3	15	junction_2	154.107418407803	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTTTTTTTTT	NA	False	NA	9	True	AATAAA	-12	NA	151016233	151056863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.66	chrX	+	5649	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	10	-11	intron_retention	FALSE	canonical	0	0	junction_10	154.244346411789	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016234	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036422_151036602_151036694_151036858_151044932_151045044_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.69	chrX	+	5498	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	10	35	intron_retention	FALSE	canonical	0	0	junction_19	115.268382481928	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151016234	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151051911_151052714_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.7	chrX	+	4938	12	NIC	ENSMUSG00000041115.17	novel	5252	14	NA	NA	91	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.58831897381646	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGGCCTCTGCCTCCT	NA	False	NA	NA	False	CATAAA	-14	NA	150962050	151008231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_150962087_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_151001872_151001973_151002727_151002890_151004642_151004817_151005917
ES.37851.70	chrX	+	5476	24	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	10	40	intron_retention	FALSE	canonical	0	0	junction_22	153.717586529055	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTTTAATTTTATTTT	NA	False	NA	20	True	AAAAAG	-26	NA	151016234	151056808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151055102_151055271_151055704
ES.37851.71	chrX	+	5707	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	10	35	intron_retention	FALSE	canonical	0	0	junction_25	130.831763727315	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151016234	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055717
ES.37851.72	chrX	+	5617	24	NNC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	11	-13	intron_retention	FALSE	canonical	0	0	junction_13	159.289027647615	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016235	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045358_151049552_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.73	chrX	+	5528	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	12	-13	intron_retention	FALSE	canonical	3	39	junction_21	128.810153153995	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTTGTTCAAAAGGA	NA	False	NA	8	True	AATAAA	-18	NA	151016236	151056751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.74	chrX	+	3926	11	ISM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	-31	17928	12	9093	5prime_fragment	FALSE	canonical	3	15	junction_2	158.940366175494	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTTGTTTATTTATA	NA	False	NA	NA	False	NA	NA	NA	151016236	151038840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694
ES.37851.75	chrX	+	5532	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	12	0	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAGAAAAAAAAAAGC	NA	False	NA	21	True	AATAAA	-31	NA	151016236	151056764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.77	chrX	+	5507	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	12	-11	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_26	128.239859398167	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016236	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704_151055898_151056046
ES.37851.78	chrX	+	5844	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	12	122	intron_retention	FALSE	canonical	0	0	junction_12	178.238016146949	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCTGAAGTGCATTT	NA	False	NA	36	True	AATAAA	-39	NA	151016236	151056890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028328_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036852_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.8	chrX	+	4948	15	NNC	ENSMUSG00000041115.17	novel	5993	15	NA	NA	22923	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	3.3956755211442	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTGGCCTCTGCCTC	NA	False	NA	NA	False	CATAAA	-12	NA	150984882	151008229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150984981_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999388_151001890_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917_151007618_151007750
ES.37851.80	chrX	+	5398	24	NIC	ENSMUSG00000025332.15	novel	5520	25	NA	NA	12	-11	intron_retention	FALSE	canonical	3	15	junction_2	154.107418407803	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016236	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.81	chrX	+	5407	24	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	12	-11	intron_retention	FALSE	canonical	3	15	junction_2	166.563690935318	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTTCAAAAGGAGA	NA	False	NA	10	True	AATAAA	-20	NA	151016236	151056753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.82	chrX	+	5691	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	12	35	intron_retention	FALSE	canonical	0	0	junction_12	115.764630176924	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGCCTATTTTAATTTT	NA	False	NA	15	True	AAAAAG	-21	NA	151016236	151056803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044950_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.83	chrX	+	6423	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-12	-6	intron_retention	FALSE	non_canonical	0	0	junction_17	114.183109083612	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCGCTCCTTTTGTGTCT	NA	False	NA	14	True	NA	NA	NA	151016237	151057525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050220_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.84	chrX	+	5762	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-11	33	intron_retention	FALSE	canonical	1	1	junction_7	132.203479530608	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151016238	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028328_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.86	chrX	+	5743	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-11	98	intron_retention	FALSE	non_canonical	0	0	junction_4	154.806025722515	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	NA	False	NA	12	True	AATAAA	-15	NA	151016238	151056866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023182_151025035_151025168_151027881_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.9	chrX	+	3922	13	NNC	ENSMUSG00000041115.17	novel	5993	15	NA	NA	23218	-1221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.20047739494525	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCTGTATCTCCAGAC	NA	False	NA	NA	False	AATATA	-31	NA	150985177	151007010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_150985293_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005917
ES.37851.91	chrX	+	5743	27	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-10	24	intron_retention	FALSE	canonical	1	2	junction_13	149.943919496867	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTCAACTAAAGCCT	NA	False	NA	4	True	AAAAAG	-10	NA	151016239	151056792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151042541_151042590_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ES.37851.92	chrX	+	6453	27	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-10	43970	intron_retention	FALSE	non_canonical	0	0	junction_26	146.188766071281	1020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCATACCTCAAGACTG	NA	False	NA	NA	False	NA	NA	NA	151016239	151101501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704_151057524_151101480
ES.37851.93	chrX	+	5543	25	NIC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-10	-10	intron_retention	FALSE	canonical	3	15	junction_2	132.651165080531	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTGTTCAAAAGGAGAA	NA	False	NA	11	True	AATAAA	-21	NA	151016239	151056754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ES.37851.95	chrX	+	1937	7	FSM	ENSMUSG00000025332.15	ENSMUST00000154938.2	1872	7	-10	-55	-10	55	multi-exon	FALSE	canonical	3	508	junction_2	14.2087609906314	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAACCCTGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	151016239	151029802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151028280_151029250
ES.37851.96	chrX	+	5705	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	-8	33	intron_retention	FALSE	canonical	2	5	junction_23	129.541122428362	976	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAGCCTATTTTAATT	NA	False	NA	13	True	AAAAAG	-19	NA	151016241	151056801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054861_151054935_151055070_151055271_151055704
ES.37851.98	chrX	+	5409	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	174.325653878022	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGCAAAACAAA	NA	False	NA	-16	True	AATAAA	-39	NA	151016242	151056772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055680_151055898_151056046
ES.37852.1	chrX	+	157	1	Antisense	novelGene_ENSMUSG00000087403.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	151102756	151102913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_151102800_151102900
ES.37853.1	chrX	-	2720	5	Antisense	novelGene_ENSMUSG00000041115.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAAATATCTAAT	195	False	NA	NA	False	NA	NA	NA	150985904	150946012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150948363_150979645_150979709_150980177_150980215_150984192_150984396_150985837
ES.37853.2	chrX	-	831	3	Antisense	novelGene_ENSMUSG00000041115.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCAGGCTTATTTGCAA	925	False	NA	NA	False	AATAAA	-25	NA	150985174	150983536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_150984106_150984192_150984396_150985115
ES.37854.1	chrX	-	1866	1	Intergenic	novelGene_31019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-9	NA	151035662	151033796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151033800_151035700
ES.37854.2	chrX	-	1415	1	Intergenic	novelGene_31020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACCTCAAAAAAATTCAAC	NA	False	NA	NA	False	TTTAAA	-32	NA	151035662	151034247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151034200_151035700
ES.37855.1	chrX	-	2353	1	Antisense	novelGene_ENSMUSG00000025332.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTAAGGGTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	151059218	151056865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_151056900_151059200
ES.37856.1	chrX	-	4340	4	FSM	ENSMUSG00000087403.10	ENSMUST00000181635.8	398	4	-37	-3905	-5	4	multi-exon	FALSE	canonical	3	22	junction_1	27.8128667266709	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110496	151077819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151081871_151103205_151103281_151110156_151110236_151110361
ES.37856.10	chrX	-	4350	4	NNC	ENSMUSG00000087403.10	novel	398	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	36.0832371053374	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTGTGTGACTTCC	NA	False	NA	NA	False	NA	NA	NA	151110464	151077823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151081871_151083746_151083868_151110156_151110236_151110361
ES.37856.11	chrX	-	4227	3	NIC	ENSMUSG00000087403.10	novel	4212	3	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGACTGTGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	151110494	151077824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151081884_151110156_151110236_151110405
ES.37856.12	chrX	-	4237	4	NNC	ENSMUSG00000087403.10	novel	4212	3	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.31816613336672	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGACTGTGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	151110464	151077824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151081871_151098362_151098416_151110156_151110236_151110405
ES.37856.14	chrX	-	2037	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	59	-1512	27	1512	multi-exon	FALSE	canonical	3	54	junction_1	13.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCATATGGCTGGAC	NA	False	NA	NA	False	NA	NA	NA	151110432	151079983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151081871_151110156_151110236_151110361
ES.37856.15	chrX	-	6209	1	Intergenic	novelGene_31022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151096928	151090719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151090700_151096900
ES.37856.16	chrX	-	4011	1	Intergenic	novelGene_31023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAGAAACACAAACTCCA	1634	False	NA	NA	False	NA	NA	NA	151094886	151090875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151090900_151094900
ES.37856.17	chrX	-	1563	4	FSM	ENSMUSG00000087403.10	ENSMUST00000141922.8	367	4	2	-1198	2	1102	multi-exon	FALSE	canonical	1	2	junction_1	33.5360502544153	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATTATTAAAGAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	151110464	151097109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151098416_151103205_151103281_151110156_151110236_151110361
ES.37856.18	chrX	-	9176	1	NIC	ENSMUSG00000087403.10	novel	398	4	NA	NA	4075	1003	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTCAAGATTAGCACT	NA	False	NA	NA	False	NA	NA	NA	151106384	151097208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151097200_151106400
ES.37856.19	chrX	-	2535	1	Genic_Genomic	ENSMUSG00000087403.10	novel	NA	NA	NA	NA	-65	-230	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	151101072	151098537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_151098500_151101100
ES.37856.2	chrX	-	4280	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	-20	-3676	-20	4	multi-exon	FALSE	canonical	3	54	junction_1	13.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110511	151077819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151081871_151110156_151110236_151110361
ES.37856.3	chrX	-	4297	4	NIC	ENSMUSG00000087403.10	novel	398	4	NA	NA	-6	4	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	2.82842712474619	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110497	151077819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151081871_151103205_151103281_151110156_151110236_151110405
ES.37856.4	chrX	-	4481	5	NNC	ENSMUSG00000087403.10	novel	398	4	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.8472918785884	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110516	151077819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151081871_151083746_151083868_151103205_151103281_151110156_151110236_151110361
ES.37856.5	chrX	-	4342	4	NNC	ENSMUSG00000087403.10	novel	4212	3	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5.55777733351102	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTGACTTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	151110496	151077819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151081871_151083746_151083868_151110156_151110236_151110405
ES.37856.6	chrX	-	4220	3	FSM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	-6	-2	-6	2	multi-exon	FALSE	canonical	3	16	junction_2	19	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110497	151077821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151081871_151110156_151110236_151110405
ES.37856.7	chrX	-	4656	6	NNC	ENSMUSG00000087403.10	novel	398	4	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.6750713120605	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110465	151077821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151081871_151083746_151083868_151102118_151102347_151103205_151103281_151110156_151110236_151110361
ES.37856.8	chrX	-	5563	1	Genic_Genomic	ENSMUSG00000087403.10	novel	NA	NA	NA	NA	17623	2	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151083384	151077821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_151077800_151083400
ES.37856.9	chrX	-	4243	3	FSM	ENSMUSG00000087403.10	ENSMUST00000149098.8	445	3	28	-3826	3	2	multi-exon	FALSE	canonical	0	0	junction_1	40.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTGTGACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	151110463	151077821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151081884_151110156_151110236_151110361
ES.37857.1	chrX	+	178	1	Intergenic	novelGene_31024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTAGCTACATCTTAT	NA	False	NA	NA	False	NA	NA	NA	151112614	151112792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151112600_151112800
ES.37858.1	chrX	-	2871	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-172	-3	-172	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	-1	True	AATAAA	-20	NA	151125593	151119847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ES.37858.12	chrX	-	3174	4	NIC	ENSMUSG00000041096.14	novel	841	6	NA	NA	1453	-3	intron_retention	FALSE	canonical	3	180	junction_3	13.490737563232	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151123344	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151122724_151122857_151123004_151123081_151123194_151123298
ES.37858.14	chrX	-	2709	7	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-28	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	69.392602871872	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125449	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123365_151124535
ES.37858.15	chrX	-	2129	7	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-19	-3	intron_retention	FALSE	canonical	0	0	junction_1	68.9865123693675	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125440	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151119979_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ES.37858.16	chrX	-	2020	6	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-26	-3	intron_retention	FALSE	canonical	0	0	junction_5	74.6763684173246	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125447	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151125156
ES.37858.18	chrX	-	2984	6	NIC	ENSMUSG00000041096.14	novel	2804	6	NA	NA	-173	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	74.6763684173246	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125594	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123390_151124535
ES.37858.19	chrX	-	2709	7	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-24	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	68.6100089879992	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125445	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151122996_151123081_151123194_151123298_151123377_151124535
ES.37858.2	chrX	-	4066	4	ISM	ENSMUSG00000041096.14	ENSMUST00000149685.8	2804	6	-25	0	-25	0	intron_retention	FALSE	canonical	3	155	junction_2	22.553639765383	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	-1	True	AATAAA	-20	NA	151125446	151119847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857
ES.37858.21	chrX	-	2879	5	NIC	ENSMUSG00000041096.14	novel	2804	6	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	155	junction_2	20.0062490237426	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125424	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123377_151124535
ES.37858.22	chrX	-	2721	7	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-15	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	69.392602871872	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTTGGAGTCTT	NA	False	NA	-7	True	AATAAA	-14	NA	151125436	151119853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123390_151124535
ES.37858.24	chrX	-	2586	6	NNC	ENSMUSG00000041096.14	novel	2804	6	NA	NA	-15	-5	intron_retention	FALSE	canonical	0	0	junction_5	74.6763684173246	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGCCTCTTGGAGTC	NA	False	NA	-9	True	AATAAA	-12	NA	151125436	151119855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123152_151124535
ES.37858.25	chrX	-	2764	7	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-6	-5	intron_retention	FALSE	canonical	0	0	junction_6	69.392602871872	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGCCTCTTGGAGTC	NA	False	NA	-9	True	AATAAA	-12	NA	151125427	151119855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123444_151124535
ES.37858.26	chrX	-	2788	8	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-15	-5	intron_retention	FALSE	canonical	1	1	junction_1	82.1891794854396	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTGCCTCTTGGAGTC	NA	False	NA	-9	True	AATAAA	-12	NA	151125436	151119855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121156_151121239_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ES.37858.27	chrX	-	2323	6	FSM	ENSMUSG00000041096.14	ENSMUST00000178165.2	841	6	-600	-882	-19	882	multi-exon	FALSE	non_canonical	0	0	junction_5	74.8561286736096	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGAATCCTGCCTTT	NA	False	NA	NA	False	CATAAA	-13	NA	151125440	151121414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123390_151124535
ES.37858.3	chrX	-	4057	6	NNC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1	junction_1	90.6818614718511	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125436	151119850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151120562_151121156_151121239_151121720_151122389_151122628_151122724_151122857_151123004_151123081
ES.37858.4	chrX	-	2907	5	NIC	ENSMUSG00000041096.14	novel	2696	7	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_4	80.7724427017037	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125436	151119850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123390_151124535
ES.37858.6	chrX	-	3579	5	ISM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	381	0	-200	0	intron_retention	FALSE	canonical	3	155	junction_2	19.5512147960172	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125040	151119850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081
ES.37858.7	chrX	-	3890	6	FSM	ENSMUSG00000041096.14	ENSMUST00000178165.2	841	6	-603	-2446	-22	0	multi-exon	FALSE	non_canonical	0	0	junction_5	74.8561286736096	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125443	151119850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123390_151124535
ES.37858.9	chrX	-	3874	6	ISM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	-19	0	-19	0	intron_retention	FALSE	canonical	3	155	junction_2	17.4974283824795	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125440	151119850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298
ES.37859.1	chrX	-	3368	1	ISM	ENSMUSG00000056679.14	ENSMUST00000070316.12	4855	3	21739	0	21739	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTCTGTTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	151129961	151126593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151126600_151130000
ES.3786.1	chr10	-	273	1	FSM	ENSMUSG00000111966.2	ENSMUST00000219792.2	443	1	231	-61	231	61	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGTATGTATGT	NA	False	NA	NA	False	NA	NA	NA	116808882	116808609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116808600_116808900
ES.37860.1	chrX	-	3347	1	Intergenic	novelGene_31025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATGATAAACTAGATT	NA	False	NA	NA	False	NA	NA	NA	151146275	151142928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151142900_151146300
ES.37861.1	chrX	-	2376	1	Intergenic	novelGene_31026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATATGAGATTTGGC	NA	False	NA	NA	False	AATAAA	-19	NA	151149453	151147077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151147100_151149500
ES.37862.1	chrX	-	1102	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	-102	-2	-102	2	multi-exon	FALSE	canonical	2	6	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTTTATAGGATGGT	NA	False	NA	NA	False	NA	NA	NA	151151802	151150009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151150266_151150416_151150507_151151046
ES.37863.1	chrX	+	929	5	NIC	ENSMUSG00000084885.8	novel	858	5	NA	NA	24	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTATTTGTCTTGGTAC	NA	False	NA	NA	False	NA	NA	NA	151152047	151199696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151152113_151152837_151153019_151168640_151168749_151186308_151186474_151199286
ES.37863.2	chrX	+	1778	1	Intergenic	novelGene_31030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGCTTCATTTTCC	723	False	NA	NA	False	NA	NA	NA	151170404	151172182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151170400_151172200
ES.37864.1	chrX	-	179	1	Intergenic	novelGene_31027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTGAACCCAGGT	NA	False	NA	NA	False	NA	NA	NA	151154963	151154784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151154800_151155000
ES.37865.1	chrX	-	137	1	Intergenic	novelGene_31028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	151156648	151156511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151156500_151156600
ES.37866.1	chrX	-	173	1	Intergenic	novelGene_31029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAGAAGAGTGC	NA	False	NA	NA	False	NA	NA	NA	151169449	151169276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151169300_151169400
ES.37867.1	chrX	-	174	1	Intergenic	novelGene_31031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATAATC	NA	False	NA	NA	False	NA	NA	NA	151174522	151174348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151174300_151174500
ES.37868.1	chrX	-	176	1	Intergenic	novelGene_31032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTAGTACATAA	NA	False	NA	NA	False	NA	NA	NA	151365802	151365626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151365600_151365800
ES.37869.1	chrX	+	160	1	Intergenic	novelGene_31033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	151388520	151388680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151388500_151388700
ES.3787.1	chr10	+	181	1	Intergenic	novelGene_2873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATAAAAAATAAA	8991	False	NA	NA	False	NA	NA	NA	116817795	116817976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116817800_116818000
ES.37870.1	chrX	+	2936	1	Intergenic	novelGene_31034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGC	NA	False	NA	NA	False	NA	NA	NA	151459963	151462899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151460000_151462900
ES.37871.1	chrX	+	157	1	Intergenic	novelGene_31035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	151496570	151496727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151496600_151496700
ES.37872.1	chrX	+	170	1	Intergenic	novelGene_31036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTTATTAAAAA	7324	False	NA	NA	False	NA	NA	NA	151529692	151529862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151529700_151529900
ES.37873.1	chrX	+	181	1	Intergenic	novelGene_31037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGGCAGA	NA	False	NA	NA	False	NA	NA	NA	151539637	151539818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151539600_151539800
ES.37874.1	chrX	-	7693	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-191	-8	-187	8	multi-exon	TRUE	canonical	3	27	junction_9	12.3987255418341	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACTACAATGCTATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	151552648	151392496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.10	chrX	-	4513	6	NIC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	213	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	25.3566559309385	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151427326	151392987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151426808
ES.37874.11	chrX	-	4028	6	NNC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	-8313	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.3566559309385	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGAATGTCTTTATTT	NA	False	NA	-5	True	AATAAA	-18	NA	151435852	151392990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406317_151435801
ES.37874.13	chrX	-	4439	6	NIC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	-299	-5	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	23.7739353073907	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTAGAATGTCTTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	151427838	151392992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151427389
ES.37874.14	chrX	-	7208	10	NNC	ENSMUSG00000045180.14	novel	6997	10	NA	NA	-204	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.9381847612168	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAAGTAGAATGTCTTT	NA	False	NA	-9	True	AATAAA	-14	NA	151552665	151392994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400366_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.15	chrX	-	3395	1	NIC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	30531	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAAGTAGAATGTCTTT	NA	False	NA	-9	True	AATAAA	-14	NA	151396389	151392994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_151393000_151396400
ES.37874.16	chrX	-	4098	7	NNC	ENSMUSG00000045180.14	novel	6997	10	NA	NA	82	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.7624857086157	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAAGTAGAATGTCTT	NA	False	NA	-10	True	AATAAA	-13	NA	151427457	151392995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151426808_151426870_151427389
ES.37874.17	chrX	-	6289	7	NNC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	11767	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.5613855468835	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAAGTAGAATGTCTT	NA	False	NA	-10	True	AATAAA	-13	NA	151444469	151392995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396655_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259
ES.37874.18	chrX	-	4300	3	ISM	ENSMUSG00000045180.14	ENSMUST00000137217.8	4338	6	26119	8	25500	-8	3prime_fragment	FALSE	canonical	3	58	junction_2	2.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAAGTAGAATGTCTT	NA	False	NA	-10	True	AATAAA	-13	NA	151401420	151392995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151395791_151396390_151396664_151400188
ES.37874.2	chrX	-	9025	9	NNC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	-16234	7	intron_retention	FALSE	canonical	0	0	junction_7	24.969669100731	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTACTACAATGCTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	151472470	151392497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151471404_151471434_151472192
ES.37874.21	chrX	-	7257	11	NNC	ENSMUSG00000045180.14	novel	6997	10	NA	NA	-188	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.0852448713827	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAAGTAGAATGTCTT	NA	False	NA	-10	True	AATAAA	-13	NA	151552649	151392995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456188_151456269_151456527_151456660_151478635_151478788_151552281
ES.37874.23	chrX	-	6600	10	FSM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	-170	567	-170	-567	multi-exon	FALSE	canonical	3	14	junction_5	17.4384278371675	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAGGTGTTGCAGACT	NA	False	NA	NA	False	AAAACA	-22	NA	151552631	151393554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.24	chrX	-	4527	7	ISM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	107910	2340	11689	679	3prime_fragment	FALSE	canonical	3	44	junction_5	7.67571929311297	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTATTGCTTGCTTTT	NA	False	NA	NA	False	GATAAA	-15	NA	151444547	151394844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259
ES.37874.25	chrX	-	5250	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-208	2452	-204	567	multi-exon	FALSE	canonical	3	27	junction_9	12.3987255418341	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTGCATGTTTTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	151552665	151394956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.26	chrX	-	4778	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-159	2875	-155	144	multi-exon	FALSE	canonical	3	27	junction_9	12.3987255418341	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTGATGATTTATTTA	NA	False	NA	NA	False	AGTAAA	-20	NA	151552616	151395379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.27	chrX	-	5029	1	Genic_Genomic	ENSMUSG00000045180.14	novel	NA	NA	NA	NA	-3782	-24174	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAGGAGGAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	151431321	151426292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_151426300_151431300
ES.37874.3	chrX	-	7721	10	NNC	ENSMUSG00000045180.14	novel	7494	10	NA	NA	-188	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.8332592591276	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACCTACTACAATGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	151552649	151392501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456495_151456660_151478635_151478788_151552281
ES.37874.4	chrX	-	7240	9	ISM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	73735	-484	-22490	1	3prime_fragment	FALSE	canonical	3	14	junction_5	16.3840623778109	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACATACCTACTACAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	151478726	151392503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635
ES.37874.5	chrX	-	7462	10	FSM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	-374	406	-370	77	multi-exon	FALSE	canonical	3	27	junction_9	12.3987255418341	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTTTGAACATGGTGT	NA	False	NA	75	True	AATAAA	-31	NA	151552831	151392910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.6	chrX	-	7484	10	FSM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	-484	-3	-484	3	multi-exon	FALSE	canonical	3	14	junction_5	17.4384278371675	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTATTTCCTACT	NA	False	NA	1	True	AATAAA	-24	NA	151552945	151392984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ES.37874.7	chrX	-	4048	6	NNC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	-8315	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	24.1694021440333	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151435854	151392987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151435801
ES.37874.9	chrX	-	7059	9	NNC	ENSMUSG00000045180.14	novel	6997	10	NA	NA	-191	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.3032198599335	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151552652	151392987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406317_151440419_151440521_151442259_151444715_151478635_151478788_151552281
ES.37875.1	chrX	+	1522	7	NIC	ENSMUSG00000025333.11	novel	1586	9	NA	NA	-73	3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	8.17346655682615	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCATTTTGACATGGAT	NA	False	NA	NA	False	AATAAA	-13	NA	151564843	151591645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151565289_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
ES.37875.2	chrX	+	1747	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	-133	-28	-68	28	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACAACCTGTAGCCAGT	NA	False	NA	NA	False	AATAAA	-38	NA	151564848	151591670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
ES.37875.3	chrX	+	2509	10	NNC	ENSMUSG00000025333.11	novel	1586	9	NA	NA	-68	1016	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	7.80471525726042	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	151564848	151592658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236_151591896_151592121
ES.37875.4	chrX	+	4034	10	NNC	ENSMUSG00000025333.11	novel	1586	9	NA	NA	2	2676	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	7.80471525726042	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATATCTCCTATTTCA	NA	False	NA	NA	False	TATAAA	-3	NA	151564983	151594318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236_151591896_151592121
ES.37876.1	chrX	+	165	1	Intergenic	novelGene_31038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAAGTTTGTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	151612603	151612768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151612600_151612800
ES.37876.2	chrX	+	975	3	Intergenic	novelGene_31039	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGCCTAGTTTGATC	NA	False	NA	NA	False	NA	NA	NA	151612604	151662730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151612830_151616515_151616635_151662099
ES.37877.1	chrX	-	681	1	FSM	ENSMUSG00000095597.3	ENSMUST00000178147.3	651	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGCCCAAGAACTTTG	NA	False	NA	NA	False	AATAAA	-44	NA	151693151	151692470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151692500_151693200
ES.37878.1	chrX	-	2661	1	Intergenic	novelGene_31040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	151748790	151746129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151746100_151748800
ES.37879.1	chrX	-	1554	1	FSM	ENSMUSG00000047238.5	ENSMUST00000051484.5	1410	1	-146	2	-146	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGTTCATTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	151820717	151819163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_151819200_151820700
ES.3788.1	chr10	-	181	1	Intergenic	novelGene_2874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCATATTGAAA	NA	False	NA	NA	False	NA	NA	NA	116866086	116865905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116865900_116866100
ES.37880.1	chrX	+	3255	5	NNC	ENSMUSG00000071665.11	novel	3210	4	NA	NA	-248	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGAGTTGATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	151901533	151915858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151901580_151901783_151901847_151902010_151902087_151909895_151909940_151912832
ES.37880.2	chrX	+	3334	6	NNC	ENSMUSG00000071665.11	novel	3210	4	NA	NA	-221	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.16619037896906	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATGTTTCTTTCTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	151901560	151915863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151901580_151901783_151901847_151902010_151902087_151908222_151908324_151909895_151909940_151912832
ES.37880.3	chrX	+	3263	4	FSM	ENSMUSG00000071665.11	ENSMUST00000096265.10	3210	4	-53	0	-53	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGAGTTGATGTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	151901728	151915857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151901847_151902010_151902087_151909895_151909940_151912832
ES.37881.1	chrX	+	2397	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-218	18237	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	82.4209318073995	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	2958	False	NA	NA	False	NA	NA	NA	151922758	151973176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151972527
ES.37881.10	chrX	+	2195	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.2445134948223	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3167	False	NA	NA	False	AATAAA	-17	NA	151922967	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927000_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.11	chrX	+	1613	10	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-1	1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	103.977561681996	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCTTCCAGTGTCAG	3181	False	NA	NA	False	NA	NA	NA	151922981	151956100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151955928
ES.37881.12	chrX	+	2230	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.7400714779507	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	3196	False	NA	NA	False	AATAAA	-15	NA	151922996	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931453_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.13	chrX	+	2247	10	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	102.702134325737	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3199	False	NA	NA	False	AATAAA	-17	NA	151922999	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936030_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.15	chrX	+	2547	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	53	309	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	79.9775593526084	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAAAAAGAAAAAAAA	3235	False	NA	NA	False	NA	NA	NA	151923035	151955248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924433_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.16	chrX	+	2357	12	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	105.19686385672	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3237	False	NA	NA	False	AATAAA	-16	NA	151923037	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151942309_151942471_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.17	chrX	+	2308	12	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.570625766798	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3238	False	NA	NA	False	AATAAA	-16	NA	151923038	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151942309_151942423_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.18	chrX	+	1944	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	67	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	85.4663091516183	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3249	False	NA	NA	False	AATAAA	-16	NA	151923049	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923332_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.19	chrX	+	3131	10	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	71	-2	intron_retention	FALSE	canonical	3	24	junction_2	83.2227414314022	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	3253	False	NA	NA	False	AATAAA	-15	NA	151923053	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924433_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182
ES.37881.2	chrX	+	3389	10	ISM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	-218	0	-218	0	intron_retention	FALSE	canonical	3	216	junction_4	31.2623309005156	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	2958	False	NA	NA	False	AATAAA	-17	NA	151922758	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182
ES.37881.20	chrX	+	2077	10	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.690323324534	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3254	False	NA	NA	False	AATAAA	-16	NA	151923054	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946091_151946166_151953182_151953299_151954211
ES.37881.21	chrX	+	4881	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	72	-1	intron_retention	FALSE	canonical	3	216	junction_4	29.6427285860241	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3254	False	NA	NA	False	AATAAA	-16	NA	151923054	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.22	chrX	+	1806	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	88	-274	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTACTGTTTTCTCAG	3270	False	NA	NA	False	AATATA	-15	NA	151923070	151954665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.23	chrX	+	2120	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	97	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	84.1700659379568	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	3279	False	NA	NA	False	AATAAA	-15	NA	151923079	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936159_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.24	chrX	+	1791	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	196	271	190	-271	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGTTTTCTCAGCAT	3372	False	NA	NA	False	AATATA	-18	NA	151923172	151954668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.25	chrX	+	1815	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	430	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	86.7410514116586	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3612	False	NA	NA	False	AATAAA	-16	NA	151923412	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946079_151946166_151953182_151953299_151954211
ES.37881.26	chrX	+	8618	8	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	1376	0	intron_retention	FALSE	canonical	3	216	junction_1	34.6139054280154	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	4558	False	NA	NA	False	AATAAA	-17	NA	151924358	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.27	chrX	+	5294	7	ISM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	5617	2	5611	-2	intron_retention	FALSE	canonical	3	216	junction_1	37.1337672027316	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	320	False	NA	NA	False	AATAAA	-15	NA	151928593	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182
ES.37881.28	chrX	+	209	1	Intergenic	novelGene_31041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCTGTGAGACAGTGG	839	False	NA	NA	False	NA	NA	NA	151935267	151935476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_151935300_151935500
ES.37881.29	chrX	+	2739	5	ISM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	12700	2	12694	-2	intron_retention	FALSE	canonical	3	237	junction_3	31.4036224025191	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	1248	False	NA	NA	False	AATAAA	-15	NA	151935676	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182
ES.37881.3	chrX	+	2381	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-206	1	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGTGTTTCTTT	2970	False	NA	NA	False	AATAAA	-18	NA	151922770	151954940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.30	chrX	+	3808	5	ISM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	15561	0	15555	0	3prime_fragment	FALSE	canonical	3	237	junction_2	30.0613955098562	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	4109	False	NA	NA	False	AATAAA	-17	NA	151938537	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.31	chrX	+	3622	3	ISM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	18771	0	18765	0	intron_retention	FALSE	canonical	3	237	junction_1	38	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	7319	False	NA	NA	False	AATAAA	-17	NA	151941747	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_151943521_151946073_151946166_151953182
ES.37881.4	chrX	+	2591	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	-206	-127	-206	127	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAGGGCTGGAGAGATG	2970	False	NA	NA	False	AATAAA	-14	NA	151922770	151955066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.5	chrX	+	2444	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	-180	-6	-180	6	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTTTCTTTTTCTT	2996	False	NA	NA	False	AATAAA	-23	NA	151922796	151954945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.6	chrX	+	2221	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-60	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	87.4744407114317	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGTGTCTGTGTTTCT	3116	False	NA	NA	False	AATAAA	-16	NA	151922916	151954938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.7	chrX	+	3146	9	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-59	0	intron_retention	FALSE	canonical	3	77	junction_3	71.1666178766421	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3117	False	NA	NA	False	AATAAA	-17	NA	151922917	151954939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182
ES.37881.8	chrX	+	2362	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-59	129	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGGCTGGAGAGATGGC	3117	False	NA	NA	False	AATAAA	-16	NA	151922917	151955068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37881.9	chrX	+	2305	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	79.9775593526084	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGTGTCTGTGTTTC	3166	False	NA	NA	False	AATAAA	-15	NA	151922966	151954937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_151923572_151924359_151924433_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ES.37882.1	chrX	-	176	1	Intergenic	novelGene_31042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCATGCCACT	NA	False	NA	NA	False	NA	NA	NA	151961485	151961309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151961300_151961500
ES.37883.1	chrX	-	217	1	Intergenic	novelGene_31043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGCCATCCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	151986362	151986145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151986100_151986400
ES.37884.1	chrX	-	225	1	Intergenic	novelGene_31044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATGTTAATTTT	NA	False	NA	NA	False	AAAAAG	-24	NA	151994162	151993937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151993900_151994200
ES.37885.1	chrX	-	203	1	Intergenic	novelGene_31045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCATTTTAAATATCAAGT	NA	False	NA	NA	False	NA	NA	NA	151998379	151998176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_151998200_151998400
ES.37886.1	chrX	-	177	1	Intergenic	novelGene_31046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAGAGAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	152002022	152001845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152001800_152002000
ES.37887.1	chrX	+	203	1	Intergenic	novelGene_31047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTAAAATATTAGAAGT	739	False	NA	NA	False	NA	NA	NA	152002630	152002833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_152002600_152002800
ES.37888.1	chrX	-	175	1	Intergenic	novelGene_31048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGTTTTGAAAAAA	8113	False	NA	NA	False	NA	NA	NA	152008234	152008059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152008100_152008200
ES.37889.1	chrX	+	4557	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-60	-93	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.8435587980495	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATAGCTTCTTGGAGT	3925	False	NA	26	True	NA	NA	NA	152020401	152179035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.10	chrX	+	4664	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	-92	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	62.3571019472947	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATAGCTTCTTGGAGTT	3934	False	NA	27	True	NA	NA	NA	152020410	152179036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.11	chrX	+	4988	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	-327	91	-45	-91	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGCTTCTTGGAGTTC	3940	False	NA	28	True	NA	NA	NA	152020416	152179037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.12	chrX	+	4145	6	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.4939453288501	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	3946	False	NA	17	True	NA	NA	NA	152020422	152178791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.13	chrX	+	4369	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-28	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	64.8445551031897	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCTTTTTTTGAGAT	3957	False	NA	14	True	NA	NA	NA	152020433	152178788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020479_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.14	chrX	+	4403	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-25	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	62.9619256506077	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGATTTTCAGGA	3960	False	NA	22	True	NA	NA	NA	152020436	152178796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152020508_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.15	chrX	+	4597	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-13	-97	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	64.8445551031897	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGATAGCTTCTTG	3972	False	NA	22	True	NA	NA	NA	152020448	152179031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020479_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.16	chrX	+	7516	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-13	2793	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	62.9619256506077	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	3972	False	NA	18	True	AATAAA	-19	NA	152020448	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152020508_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.17	chrX	+	4530	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-13	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.2710318233822	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGCTTCTTGGAGTTC	3972	False	NA	28	True	NA	NA	NA	152020448	152179037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152060033_152060125_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.18	chrX	+	6282	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-12	1753	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.3394733865769	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGGAAGCAAGATTA	3973	False	NA	NA	False	AATAAA	-16	NA	152020449	152180881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.2	chrX	+	4454	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-57	-120	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.3394733865769	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAACAGCTCCTTATT	3928	False	NA	-1	True	NA	NA	NA	152020404	152179008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.20	chrX	+	4195	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.3394733865769	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTGAGATTTTCAG	3973	False	NA	20	True	NA	NA	NA	152020449	152178794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.21	chrX	+	4445	9	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	63.7866316323413	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCTTTTTTTGAGATTT	3985	False	NA	16	True	NA	NA	NA	152020461	152178790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152020508_152020946_152021089_152091847_152091921_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.23	chrX	+	4273	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.7076898495978	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	3990	False	NA	19	True	NA	NA	NA	152020466	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020508_152020946_152021089_152060033_152060125_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.27	chrX	+	4674	9	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	10	-99	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	63.7866316323413	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGTTGTGATAGCTTCT	3995	False	NA	20	True	NA	NA	NA	152020471	152179029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152020508_152020946_152021089_152091847_152091921_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.29	chrX	+	6248	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	20	1752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.30451131123	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCACTGGAAGCAAGATT	4005	False	NA	NA	False	AATAAA	-15	NA	152020481	152180880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.3	chrX	+	6486	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	1754	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	64.8445551031897	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	3934	False	NA	NA	False	AATAAA	-17	NA	152020410	152180882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020479_152020946_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.30	chrX	+	4166	7	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	71.8093540796276	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	4005	False	NA	19	True	NA	NA	NA	152020481	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152020508_152020946_152021089_152091847_152091921_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.31	chrX	+	4417	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	49	-119	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAACAGCTCCTTATTC	4034	False	NA	0	True	NA	NA	NA	152020510	152179009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.32	chrX	+	4489	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	49	-120	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.3199347638301	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAACAGCTCCTTATT	4034	False	NA	-1	True	NA	NA	NA	152020510	152179008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.33	chrX	+	4205	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	50	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAGATTTTCAGGAAA	4035	False	NA	24	True	NA	NA	NA	152020511	152178798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.34	chrX	+	7321	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	57	2793	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.2814419775381	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	4042	False	NA	18	True	AATAAA	-19	NA	152020518	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.35	chrX	+	7386	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	65	2793	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.3199347638301	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	4050	False	NA	18	True	AATAAA	-19	NA	152020526	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.36	chrX	+	6335	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	77	1754	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	65.3199347638301	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	4062	False	NA	NA	False	AATAAA	-17	NA	152020538	152180882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020571_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.37	chrX	+	7369	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	106	2790	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	65.8957122881237	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCGTGGGTTTTGTGTTT	4091	False	NA	15	True	AATAAA	-16	NA	152020567	152181918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020598_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.38	chrX	+	4763	6	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	107	-91	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	53.440059880206	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGCTTCTTGGAGTTC	4092	False	NA	28	True	NA	NA	NA	152020568	152179037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.39	chrX	+	4433	9	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	107	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.2210332302289	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	4092	False	NA	17	True	NA	NA	NA	152020568	152178791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020598_152020946_152021089_152091847_152091921_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167707_152168369_152168510_152175682
ES.37889.4	chrX	+	4814	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	-333	271	-51	64	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTTTGGTATACTT	3934	False	NA	83	True	NA	NA	NA	152020410	152178857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.40	chrX	+	6484	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	22	-1754	22	1754	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	4289	False	NA	NA	False	AATAAA	-17	NA	152020765	152180882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.41	chrX	+	4508	7	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	55.3162624269653	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	4289	False	NA	17	True	NA	NA	NA	152020765	152178791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152021089_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.42	chrX	+	4314	6	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	30	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	53.440059880206	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	4297	False	NA	19	True	NA	NA	NA	152020773	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.43	chrX	+	7478	7	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	80	2788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.2008114810186	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCGTGGGTTTTGTGT	4347	False	NA	13	True	AATAAA	-14	NA	152020823	152181916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152021089_152060033_152060125_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.44	chrX	+	7271	6	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	201	2793	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	53.440059880206	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	4468	False	NA	18	True	AATAAA	-19	NA	152020944	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152021089_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.45	chrX	+	319	1	Intergenic	novelGene_31049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATAAAAGTCA	2962	False	NA	NA	False	NA	NA	NA	152026008	152026327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_152026000_152026300
ES.37889.46	chrX	+	7312	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53906	2790	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	65.0676997868801	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCGTGGGTTTTGTGTTT	NA	False	NA	15	True	AATAAA	-16	NA	152088702	152181918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152088818_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.47	chrX	+	4187	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53906	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	65.0676997868801	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152088702	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152088818_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.48	chrX	+	4114	6	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53906	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.2130704996898	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152088702	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152088818_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.49	chrX	+	4406	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	-53882	-92	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	65.0676997868801	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATAGCTTCTTGGAGTT	NA	False	NA	27	True	NA	NA	NA	152088726	152179036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152088818_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.5	chrX	+	5181	8	NIC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	-92	intron_retention	FALSE	canonical	0	0	junction_2	59.9057082217631	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATAGCTTCTTGGAGTT	3934	False	NA	27	True	NA	NA	NA	152020410	152179036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152021089_152091847_152091921_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.50	chrX	+	4745	8	FSM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	-91	-247	-91	-88	multi-exon	FALSE	canonical	2	12	junction_1	60.7816433083649	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTCTTGGAGTTCTTT	NA	False	NA	31	True	NA	NA	NA	152142517	152179040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152142706_152142837_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.51	chrX	+	4473	8	FSM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	-63	-3	-63	3	multi-exon	FALSE	canonical	2	12	junction_1	60.7816433083649	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGATTTTCAGGA	NA	False	NA	22	True	NA	NA	NA	152142545	152178796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152142706_152142837_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.52	chrX	+	4931	6	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-56	5	intron_retention	FALSE	canonical	3	100	junction_1	23.8964432499902	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAGATTTTCAGGAAA	NA	False	NA	24	True	NA	NA	NA	152142552	152178798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.53	chrX	+	6684	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-56	1754	intron_retention	FALSE	canonical	3	13	junction_1	51.9123192401273	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	152142552	152180882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.54	chrX	+	4339	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-52	3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGAGATTTTCAGGA	NA	False	NA	22	True	NA	NA	NA	152142556	152178796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.55	chrX	+	4546	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-39	-112	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTTATTCTCCTCGT	NA	False	NA	7	True	NA	NA	NA	152142569	152179016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.56	chrX	+	4575	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-32	4	intron_retention	FALSE	canonical	3	13	junction_1	51.9123192401273	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGAGATTTTCAGGAA	NA	False	NA	23	True	NA	NA	NA	152142576	152178797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.57	chrX	+	2725	6	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-28	-2173	intron_retention	FALSE	canonical	3	100	junction_1	23.8964432499902	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCATTCTTTTTAGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	152142580	152176620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.58	chrX	+	6987	6	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-28	1754	intron_retention	FALSE	canonical	3	100	junction_1	23.8964432499902	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTGGAAGCAAGATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	152142580	152180882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.59	chrX	+	6584	8	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-28	1752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.6389689368624	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCACTGGAAGCAAGATT	NA	False	NA	NA	False	AATAAA	-15	NA	152142580	152180880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142706_152142837_152143023_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.6	chrX	+	4310	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.8435587980495	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGAGATTTTCAGGAA	3934	False	NA	23	True	NA	NA	NA	152020410	152178797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.60	chrX	+	4284	7	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.938982682756	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTCTTTTTTTGAGAT	NA	False	NA	14	True	NA	NA	NA	152142581	152178788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142680_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167707_152168369_152168510_152175682
ES.37889.61	chrX	+	7409	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	3	2793	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	NA	False	NA	18	True	AATAAA	-19	NA	152142611	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.62	chrX	+	4473	7	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	5	0	intron_retention	FALSE	canonical	2	3	junction_1	55.3162624269653	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152142613	152178793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142900_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.63	chrX	+	6559	7	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	5	1751	intron_retention	FALSE	canonical	2	3	junction_1	55.3162624269653	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCCACTGGAAGCAAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	152142613	152180879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142900_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.64	chrX	+	6362	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	9	1752	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCACTGGAAGCAAGATT	NA	False	NA	NA	False	AATAAA	-15	NA	152142617	152180880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.65	chrX	+	4693	8	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	208	-90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.2557631928118	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCTTCTTGGAGTTCT	NA	False	NA	29	True	NA	NA	NA	152142816	152179038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142900_152143291_152143480_152149890_152150069_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.66	chrX	+	4542	7	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	213	-216	213	-119	3prime_fragment	FALSE	canonical	3	13	junction_1	51.9123192401273	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAACAGCTCCTTATTC	NA	False	NA	0	True	NA	NA	NA	152142821	152179009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.67	chrX	+	4410	7	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	215	147	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	55.3162624269653	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGCTTTTATCTGCT	NA	False	NA	-69	True	NA	NA	NA	152142823	152178940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152142900_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.68	chrX	+	4247	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	352	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.3454129060703	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	NA	False	NA	17	True	NA	NA	NA	152142960	152178791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152143023_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.69	chrX	+	4227	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	420	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.3454129060703	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAGATTTTCAGGAAA	NA	False	NA	24	True	NA	NA	NA	152143028	152178798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152143064_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.7	chrX	+	7878	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	-333	-2793	-51	2793	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	3934	False	NA	18	True	AATAAA	-19	NA	152020410	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.70	chrX	+	4676	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	439	-245	439	-90	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCTTCTTGGAGTTCT	NA	False	NA	29	True	NA	NA	NA	152143047	152179038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.71	chrX	+	7545	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	453	-3128	453	2793	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGTTTTGTGTTTAAT	NA	False	NA	18	True	AATAAA	-19	NA	152143061	152181921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.72	chrX	+	6336	7	NNC	ENSMUSG00000041649.14	novel	247	3	NA	NA	462	1750	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.3454129060703	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGCCACTGGAAGCAAGA	NA	False	NA	NA	False	AATAAA	-13	NA	152143070	152180878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152143135_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.73	chrX	+	4738	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	486	-354	486	19	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGGTCAATGAAAGCTAGG	NA	False	NA	NA	False	NA	NA	NA	152143094	152179147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.74	chrX	+	3148	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	488	1234	488	-1234	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATGTGATTGGTTGC	NA	False	NA	NA	False	ATTAAA	-7	NA	152143096	152177559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.75	chrX	+	4363	7	NNC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	683	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.432368946671	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTTTTTTGAGATTTT	NA	False	NA	17	True	NA	NA	NA	152143291	152178791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152143480_152149890_152150069_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.76	chrX	+	3096	1	Intergenic	novelGene_31055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCTCCTTAAAGCC	NA	False	NA	NA	False	NA	NA	NA	152161730	152164826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_152161700_152164800
ES.37889.77	chrX	+	8831	1	Genic_Genomic	ENSMUSG00000041649.14	novel	NA	NA	NA	NA	30477	2788	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCGTGGGTTTTGTGT	NA	False	NA	13	True	AATAAA	-14	NA	152173085	152181916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_152173100_152181900
ES.37889.8	chrX	+	6394	8	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	1753	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	63.8435587980495	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGGAAGCAAGATTA	3934	False	NA	NA	False	AATAAA	-16	NA	152020410	152180881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.37889.9	chrX	+	4564	10	NNC	ENSMUSG00000041649.14	novel	4752	7	NA	NA	-51	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.8529319267662	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGAGATTTTCAGGAA	3934	False	NA	23	True	NA	NA	NA	152020410	152178797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152020503_152020946_152021089_152042995_152043062_152091847_152091921_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ES.3789.1	chr10	+	1154	6	NNC	ENSMUSG00000112242.2	novel	1014	2	NA	NA	-9009	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTACTTCTCCACCTT	NA	False	NA	NA	False	AATATA	-10	NA	116870641	116880999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_116870683_116871934_116872005_116875602_116875957_116878212_116878275_116879460_116879701_116880612
ES.37890.1	chrX	-	725	1	Intergenic	novelGene_31050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	152027501	152026776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152026800_152027500
ES.37891.1	chrX	-	174	1	Intergenic	novelGene_31051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAATGTATAAAT	NA	False	NA	NA	False	NA	NA	NA	152084858	152084684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152084700_152084900
ES.37892.1	chrX	-	156	1	Intergenic	novelGene_31052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAATAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	152086594	152086438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152086400_152086600
ES.37893.1	chrX	-	1349	1	Intergenic	novelGene_31053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	152122585	152121236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152121200_152122600
ES.37894.1	chrX	-	4977	1	Intergenic	novelGene_31054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCTTGAAACTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	152162666	152157689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152157700_152162700
ES.37895.1	chrX	+	3432	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-84	-4	-84	4	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTGCCTTTTGGCC	7248	False	NA	17	True	ATTAAA	-44	NA	152281138	152284570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152281100_152284600
ES.37895.2	chrX	+	3211	2	Genic_Genomic	ENSMUSG00000050148.10	novel	3344	1	NA	NA	-38	-33	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAATA	7294	False	NA	-20	True	ATTAAA	-7	NA	152281184	152284533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_152281254_152281391
ES.37895.3	chrX	+	2848	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	-13	509	-13	-509	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAGAAAGAATATAAG	7319	False	NA	NA	False	NA	NA	NA	152281209	152284057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152281200_152284100
ES.37895.4	chrX	+	2693	2	Genic_Genomic	ENSMUSG00000050148.10	novel	3344	1	NA	NA	22	-33	multi-exon	FALSE	non_canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAATA	7354	False	NA	-20	True	ATTAAA	-7	NA	152281244	152284533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_152283845_152284440
ES.37896.1	chrX	-	182	1	Intergenic	novelGene_31056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAATCCTAGAG	4295	False	NA	NA	False	NA	NA	NA	152291183	152291001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152291000_152291200
ES.37897.1	chrX	-	157	1	Intergenic	novelGene_31057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATTAAAAAAAAA	7082	False	NA	NA	False	NA	NA	NA	152320378	152320221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_152320200_152320400
ES.37898.1	chrX	+	325	1	Intergenic	novelGene_31058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	152460956	152461281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_152461000_152461300
ES.37898.2	chrX	+	155	1	Intergenic	novelGene_31059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	152460959	152461114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_152461000_152461100
ES.37899.1	chrX	+	823	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	0	-35	0	35	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGCTATACGATTATTA	NA	False	NA	44	True	AATAAA	-19	NA	152506585	152524295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ES.37899.2	chrX	+	4547	5	NNC	ENSMUSG00000086316.9	novel	788	4	NA	NA	-5	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.6055209027272	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTAGAGCTATACGATT	NA	False	NA	40	True	AATAAA	-15	NA	152506600	152524291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152506934_152508700_152508838_152511857_152515525_152522487_152522642_152524035
ES.37899.3	chrX	+	3819	3	NIC	ENSMUSG00000086316.9	novel	788	4	NA	NA	-2	29	intron_retention	FALSE	canonical	3	149	junction_2	7	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGTTAGAGCTATACGA	NA	False	NA	38	True	AATAAA	-13	NA	152506603	152524289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152506934_152508700_152511936_152524035
ES.37899.4	chrX	+	723	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	-2	625	-2	31	multi-exon	FALSE	canonical	3	65	junction_2	49	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTAGAGCTATACGATT	NA	False	NA	40	True	AATAAA	-15	NA	152506603	152524291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152506934_152508700_152508838_152524035
ES.37899.5	chrX	+	1399	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	-15	-609	2	609	multi-exon	FALSE	canonical	3	163	junction_1	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGATAAACTGTCTAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	152506607	152512793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152506934_152508700_152508838_152511857
ES.37899.6	chrX	+	4380	4	NNC	ENSMUSG00000086316.9	novel	788	4	NA	NA	6	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.291478179656	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGTTAGAGCTATACGA	NA	False	NA	38	True	AATAAA	-13	NA	152506611	152524289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152506934_152508700_152508838_152511857_152515525_152524035
ES.37899.7	chrX	+	10487	4	NNC	ENSMUSG00000086316.9	novel	775	3	NA	NA	7	35	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.8203058333749	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGCTATACGATTATTA	NA	False	NA	44	True	AATAAA	-19	NA	152506612	152524295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152506934_152508700_152508838_152511857_152515525_152517933
ES.37899.8	chrX	+	647	4	NNC	ENSMUSG00000086316.9	novel	788	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	74.9281136972113	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	False	NA	9	True	ATTAAA	-14	NA	152506621	152524260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_152506829_152508700_152508838_152511857_152511936_152524035
ES.37899.9	chrX	+	7074	1	NIC	ENSMUSG00000086316.9	novel	788	4	NA	NA	8358	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	False	NA	9	True	ATTAAA	-14	NA	152517186	152524260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_152517200_152524300
ES.379.1	chr1	+	2845	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	-69	-4	-69	4	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTTGTGTTTTGG	NA	False	NA	15	True	AATAAA	-19	NA	43484841	43609679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
ES.379.10	chr1	+	6368	3	NNC	ENSMUSG00000066877.12	novel	2772	5	NA	NA	30292	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGTGTTTGTGTT	NA	False	NA	11	True	AATAAA	-15	NA	43603020	43609675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43605243_43605474_43605938_43605992
ES.379.11	chr1	+	4700	1	Genic_Genomic	ENSMUSG00000066877.12	novel	NA	NA	NA	NA	32250	3	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGTTTGTGTTTTG	NA	False	NA	14	True	AATAAA	-18	NA	43604978	43609678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_43605000_43609700
ES.379.2	chr1	+	3639	6	NNC	ENSMUSG00000066877.12	novel	2772	5	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.7145369935907	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGTGTTTGTGTTT	NA	False	NA	12	True	AATAAA	-16	NA	43484915	43609676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43485188_43548780_43548944_43552122_43552994_43572711_43572954_43593020_43593743_43608307
ES.379.3	chr1	+	5844	4	ISM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	9	11484	9	4969	5prime_fragment	FALSE	canonical	3	160	junction_2	13.8162545173751	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTGTTGAGTCCAT	NA	False	NA	NA	False	NA	NA	NA	43484919	43598191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020
ES.379.4	chr1	+	4194	4	ISM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	9	13134	9	3319	5prime_fragment	FALSE	canonical	3	160	junction_2	13.8162545173751	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAGTGTCAGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	43484919	43596541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020
ES.379.6	chr1	+	3509	6	NNC	ENSMUSG00000066877.12	novel	2772	5	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.7145369935907	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGTGTTTGTGTTT	NA	False	NA	12	True	AATAAA	-16	NA	43484938	43609676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43485188_43548780_43548944_43552122_43552887_43572711_43572954_43593020_43593743_43608307
ES.379.7	chr1	+	2747	6	NNC	ENSMUSG00000066877.12	novel	2772	5	NA	NA	41	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.9377052236411	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAGTATTATGA	NA	False	NA	-9	True	NA	NA	NA	43484951	43609655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43604706_43604743_43608307
ES.379.8	chr1	+	2755	1	FSM	ENSMUSG00000103945.2	ENSMUST00000193169.2	1293	1	-635	-827	-635	827	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTAGTCAGCAGGTGTC	NA	False	NA	NA	False	NA	NA	NA	43598797	43601552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43598800_43601600
ES.379.9	chr1	+	176	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43600865	43601041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_43600900_43601000
ES.3790.1	chr10	-	175	1	Intergenic	novelGene_2875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGAGTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	116874297	116874122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116874100_116874300
ES.37900.1	chrX	-	9292	1	Antisense	novelGene_ENSMUSG00000086316.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAGGACCGGCCTATT	NA	False	NA	NA	False	AATAGA	-26	NA	152517447	152508155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_152508200_152517400
ES.37901.1	chrX	+	1346	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	-41	4	11	-4	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTAGTCATCTAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	152615247	152617235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152615545_152616186
ES.37901.2	chrX	+	1243	3	FSM	ENSMUSG00000046550.9	ENSMUST00000123264.2	536	3	11	-718	11	-2	multi-exon	FALSE	canonical	3	17	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTCATCTAAAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	152615247	152617237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_152615326_152615430_152615545_152616186
ES.37901.3	chrX	+	1987	1	Genic_Genomic	ENSMUSG00000046550.9	novel	NA	NA	NA	NA	14	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAGTCATCTAAAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	152615250	152617237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_152615200_152617200
ES.37902.1	chrX	-	181	1	Intergenic	novelGene_31060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAGAAA	5891	False	NA	NA	False	NA	NA	NA	153256986	153256805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_153256800_153257000
ES.37903.1	chrX	-	1108	3	NNC	ENSMUSG00000072100.5	novel	1079	2	NA	NA	-23380	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGTGTCAGAGTATAT	NA	False	NA	NA	False	AATAAA	-15	NA	153696643	153669800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153670743_153694959_153695062_153696579
ES.37904.1	chrX	-	4350	1	Genic_Genomic	ENSMUSG00000063728.11	novel	NA	NA	NA	NA	2015	4261	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGATGTTGTCTTGGCG	NA	False	NA	NA	False	NA	NA	NA	153707096	153702746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_153702700_153707100
ES.37904.2	chrX	-	5902	9	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-23026	4119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.51800391224184	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGTAGTAATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	153742009	153702888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588_153720688_153721423_153721454_153733511_153733601_153740339_153740441_153741158_153741264_153741953
ES.37904.3	chrX	-	1720	4	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-1668	354	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATACTCTTCACTGCTTC	NA	False	NA	NA	False	NA	NA	NA	153720651	153706653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588
ES.37904.4	chrX	-	1598	4	NNC	ENSMUSG00000063728.11	novel	1212	3	NA	NA	-1651	249	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAGATTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	153720634	153706758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153708120_153709022_153709112_153718972_153719075_153720588
ES.37904.5	chrX	-	1749	5	Genic_Genomic	ENSMUSG00000094196.3	novel	963	1	NA	NA	-9503	375	multi-exon	FALSE	canonical	3	11	junction_3	4.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTTTAATCTCTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	153742004	153731163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_153732567_153733511_153733601_153740339_153740441_153741158_153741264_153741953
ES.37905.1	chrX	-	1781	5	NNC	ENSMUSG00000079350.3	novel	1646	4	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	13.4233937586588	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTAGTTTCTTGTT	NA	False	NA	-3	True	AATAAA	-18	NA	153778875	153768768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153770173_153771107_153771197_153777179_153777280_153777995_153778100_153778791
ES.37905.2	chrX	-	1646	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCTTTAGTTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	153778846	153768770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
ES.37906.1	chrX	-	1727	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	-23	-19	-23	19	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGCACTGGTGCCCT	NA	False	NA	NA	False	ATTAAA	-38	NA	153816311	153810177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
ES.37906.2	chrX	-	1812	5	NNC	ENSMUSG00000055746.10	novel	1685	4	NA	NA	-7	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.1114615137893	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCTGCACTGGTGCCC	NA	False	NA	NA	False	ATTAAA	-37	NA	153816295	153810178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153811648_153812583_153812673_153814604_153814707_153815451_153815557_153816248
ES.37906.4	chrX	-	1435	3	NIC	ENSMUSG00000055746.10	novel	1685	4	NA	NA	-23	115	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	13	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAATTTGTAAAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	153816311	153810364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_153811648_153812583_153812673_153816248
ES.37907.1	chrX	-	4214	1	Genic_Genomic	ENSMUSG00000079349.10	novel	NA	NA	NA	NA	4282	3	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTAGTTTCTTTTTGTG	NA	False	NA	3	True	AATAAA	-21	NA	153840267	153836053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_153836100_153840300
ES.37907.2	chrX	-	1747	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-615	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.2792997906732	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153846756	153836056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086_153846186_153846697
ES.37907.3	chrX	-	1584	3	NIC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	18.5	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153846170	153836056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_153837456_153844474_153844576_153846086
ES.37907.4	chrX	-	1748	5	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	19.2272592950738	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGTTTAGTTTCTTT	NA	False	NA	-2	True	AATAAA	-16	NA	153846143	153836058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153845292_153845397_153846086
ES.37907.5	chrX	-	1890	6	NNC	ENSMUSG00000079349.10	novel	1360	4	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.1224998520535	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGTTTAGTTTCTTT	NA	False	NA	-2	True	AATAAA	-16	NA	153846160	153836058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153837456_153838390_153838480_153844474_153844576_153844999_153845125_153845292_153845397_153846086
ES.37907.6	chrX	-	1414	2	NNC	ENSMUSG00000079349.10	novel	1563	3	NA	NA	-27601	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTGTTTAGTTTCTTT	NA	False	NA	-2	True	AATAAA	-16	NA	153873742	153836058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153837456_153873725
ES.37908.2	chrX	+	2754	2	Genic_Genomic	ENSMUSG00000082560.2	novel	702	1	NA	NA	-1026	1874	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGCAAGTGTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	153967648	153971250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_153967809_153968656
ES.37909.1	chrX	+	3383	1	Antisense	novelGene_ENSMUSG00000025283.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGTCAATACATAACTAAA	NA	False	NA	NA	False	NA	NA	NA	153994522	153997905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_153994500_153997900
ES.3791.1	chr10	+	171	1	Intergenic	novelGene_2876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	116895246	116895417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116895200_116895400
ES.37910.1	chrX	-	1215	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	-48	-5	-48	5	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTTACTAGTCCTAT	NA	False	NA	-2	True	AATAAA	-29	NA	153999493	153996122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ES.37910.2	chrX	-	1216	7	FSM	ENSMUSG00000025283.16	ENSMUST00000152463.8	1272	7	54	2	-50	-2	multi-exon	FALSE	canonical	3	28	junction_4	540.496993516153	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGAGCATTTTTACTA	NA	False	NA	-9	True	AATAAA	-22	NA	153999391	153996129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998116_153998227_153998596_153998681_153998780_153998833_153999098
ES.37910.3	chrX	-	2886	3	NIC	ENSMUSG00000025283.16	novel	1352	6	NA	NA	-44	-6	intron_retention	FALSE	canonical	3	1236	junction_2	39.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCCTGAGCATTTTT	NA	False	NA	-13	True	AATAAA	-18	NA	153999385	153996133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_153998681_153998780_153998833_153999098
ES.37910.4	chrX	-	1005	5	NIC	ENSMUSG00000025283.16	novel	1162	6	NA	NA	3	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	545.866512986463	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999338	153996136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_153996664_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ES.37910.5	chrX	-	1133	6	FSM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	-63	-174	41	-9	multi-exon	FALSE	canonical	3	19	junction_2	481.393144944961	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999404	153996136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_153996664_153996892_153996955_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ES.37910.6	chrX	-	2569	5	NIC	ENSMUSG00000025283.16	novel	1352	6	NA	NA	50	-9	intron_retention	FALSE	canonical	3	1003	junction_1	114.726577130149	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999395	153996136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_153996664_153996892_153996934_153997028_153998681_153998780_153998833_153999098
ES.37910.8	chrX	-	981	7	NNC	ENSMUSG00000025283.16	novel	1272	7	NA	NA	50	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	453.577048459122	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	False	NA	-16	True	AATAAA	-15	NA	153999395	153996136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098_153999204_153999325
ES.37910.9	chrX	-	899	3	ISM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	1	1765	1	375	5prime_fragment	FALSE	canonical	3	1236	junction_2	39.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTATTTTCGCTTCCTG	NA	False	NA	NA	False	AAAACA	-12	NA	153999340	153998075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_153998681_153998780_153998833_153999098
ES.37911.1	chrX	-	239	1	Intergenic	novelGene_31061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATTTGCTAAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	154021562	154021323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154021300_154021600
ES.37912.1	chrX	+	1616	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	-9	145	-9	-137	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTCACTTTGCTTTGT	NA	False	NA	18	True	AATAAA	-18	NA	154045429	154080505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.10	chrX	+	2154	14	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	56	156	-6	-148	intron_retention	FALSE	canonical	2	666	junction_2	113.313984889764	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGTACTGATGTTCA	NA	False	NA	7	True	AATAAA	-7	NA	154045494	154080494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ES.37912.11	chrX	+	3108	15	NIC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	0	-1	intron_retention	FALSE	canonical	2	32	junction_1	266.333226907763	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGAGTCTCCCATGTTG	NA	False	NA	25	True	AATAAA	-19	NA	154045500	154080649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.12	chrX	+	6453	1	NIC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	6	5381	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAACGCTCTTTAGTGCC	NA	False	NA	NA	False	NA	NA	NA	154045506	154051959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154045500_154052000
ES.37912.13	chrX	+	1950	17	NNC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	6	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	388.173039498817	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTGATGTTCACTTTG	NA	False	NA	12	True	AATAAA	-12	NA	154045506	154080499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154046363_154046723_154047031_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.14	chrX	+	609	5	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	79	24119	17	9953	5prime_fragment	FALSE	canonical	2	666	junction_2	133.121185391357	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTTCATCGTC	NA	False	NA	NA	False	CATAAA	-6	NA	154045517	154056531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387
ES.37912.15	chrX	+	2940	15	NIC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	22	-139	intron_retention	FALSE	canonical	2	32	junction_1	266.333226907763	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154045522	154080503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.16	chrX	+	1459	15	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	22	-140	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_3	266.748333583151	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGTTCACTTTGCTT	NA	False	NA	15	True	AATAAA	-15	NA	154045522	154080502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154052654_154052750_154054947_154054994_154056028_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.17	chrX	+	719	6	NIC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	33	-139	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	424.590814785247	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154045533	154080503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154045671_154052654_154052750_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.19	chrX	+	1589	15	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	35	3	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_3	266.748333583151	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATTGTGAGTCTCCCAT	NA	False	NA	21	True	AATAAA	-15	NA	154045535	154080645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154052654_154052750_154054947_154054994_154056028_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.2	chrX	+	1441	15	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	10	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.851740016754	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGTTCACTTTGCTT	NA	False	NA	15	True	AATAAA	-15	NA	154045448	154080502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045518_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.20	chrX	+	5880	13	NIC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	35	2	intron_retention	FALSE	canonical	3	32	junction_1	275.78175499639	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATTGTGAGTCTCCCA	NA	False	NA	20	True	AATAAA	-14	NA	154045535	154080644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154047090_154052654_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ES.37912.23	chrX	+	1642	15	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	274.638621553815	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGATTGTGAGTCTCCC	NA	False	NA	19	True	AATAAA	-13	NA	154045535	154080643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078684_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.24	chrX	+	3449	14	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	35	-140	intron_retention	FALSE	canonical	0	0	junction_2	277.156034492524	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGTTCACTTTGCTT	NA	False	NA	15	True	AATAAA	-15	NA	154045535	154080502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154052654_154052750_154053979_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.27	chrX	+	2186	16	NIC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	83	-139	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	340.585274034109	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154045583	154080503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154045671_154046363_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.28	chrX	+	940	9	ISM	ENSMUSG00000025287.16	ENSMUST00000131332.8	1740	16	19545	139	-11793	-139	3prime_fragment	FALSE	canonical	3	900	junction_6	82.4946020961372	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154065045	154080503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.29	chrX	+	1080	9	ISM	ENSMUSG00000025287.16	ENSMUST00000131332.8	1740	16	19545	-1	-11793	1	3prime_fragment	FALSE	canonical	3	900	junction_6	82.4946020961372	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGATTGTGAGTCTCCC	NA	False	NA	19	True	AATAAA	-13	NA	154065045	154080643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.3	chrX	+	1732	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	21	-1	21	1	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTCCCATGTTGTT	NA	False	NA	27	True	AATAAA	-21	NA	154045459	154080651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.5	chrX	+	2307	14	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	52	7	-10	1	intron_retention	FALSE	canonical	2	666	junction_2	113.313984889764	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGATTGTGAGTCTCCC	NA	False	NA	19	True	AATAAA	-13	NA	154045490	154080643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ES.37912.7	chrX	+	1713	15	NNC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	275.441843559895	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATTGTGAGTCTCCCAT	NA	False	NA	21	True	AATAAA	-15	NA	154045491	154080645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_154045671_154052654_154052750_154054947_154054994_154055948_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.8	chrX	+	1610	16	FSM	ENSMUSG00000025287.16	ENSMUST00000131332.8	1740	16	-9	139	-9	-139	multi-exon	FALSE	canonical	2	22	junction_1	338.793873747577	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTTCACTTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	154045491	154080503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_154045671_154047031_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ES.37912.9	chrX	+	3722	14	NIC	ENSMUSG00000025287.16	novel	1740	16	NA	NA	-7	0	intron_retention	FALSE	canonical	2	32	junction_1	273.020275814668	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGATTGTGAGTCTCC	NA	False	NA	18	True	AATAAA	-12	NA	154045493	154080642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ES.37913.1	chrX	+	2660	2	Intergenic	novelGene_31062	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAACTAAAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	154088808	154091581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_154088856_154088968
ES.37914.1	chrX	-	4182	2	Genic_Genomic	ENSMUSG00000052157.5	novel	1551	1	NA	NA	-381	3498	multi-exon	FALSE	canonical	3	17	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCATCTATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154089126	154083696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_154086142_154087389
ES.37914.2	chrX	-	5266	1	FSM	ENSMUSG00000052157.5	ENSMUST00000144428.2	1551	1	-217	-3498	-217	3498	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCATCTATTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	154088962	154083696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_154083700_154089000
ES.37914.3	chrX	-	4012	3	Genic_Genomic	ENSMUSG00000052157.5	novel	1551	1	NA	NA	-353	3469	multi-exon	TRUE	canonical	0	0	junction_2	8.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAATTAATAA	NA	False	NA	NA	False	ACTAAA	-35	NA	154089098	154083725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_154086142_154087389_154088880_154088992
ES.37915.1	chrX	-	192	1	Intergenic	novelGene_31063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTTGCATGAATGCT	NA	False	NA	NA	False	NA	NA	NA	154089858	154089666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154089700_154089900
ES.37916.1	chrX	-	232	1	Intergenic	novelGene_31064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCTGCCAGGTTTCCC	NA	False	NA	NA	False	NA	NA	NA	154097122	154096890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154096900_154097100
ES.37917.1	chrX	-	1028	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	-39	1	-32	-1	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGTTTGCCATTGTAATT	NA	False	NA	-2	True	AATAAA	-21	NA	154121502	154106914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
ES.37917.3	chrX	-	4126	6	ISM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	18	3	18	-3	intron_retention	FALSE	canonical	3	951	junction_2	70.6784266944306	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCGTTTGCCATTGTAA	NA	False	NA	-4	True	AATAAA	-19	NA	154121445	154106916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833
ES.37917.4	chrX	-	6642	5	NIC	ENSMUSG00000025289.16	novel	990	7	NA	NA	68	-3	intron_retention	FALSE	canonical	3	951	junction_1	76.0493260982634	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCGTTTGCCATTGTAA	NA	False	NA	-4	True	AATAAA	-19	NA	154121395	154106916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833
ES.37918.1	chrX	-	175	1	Intergenic	novelGene_31065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACTTAGAATTTCC	NA	False	NA	NA	False	NA	NA	NA	154174424	154174249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154174200_154174400
ES.37919.1	chrX	-	2863	1	Intergenic	novelGene_31066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTTGACCTCTGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	154355679	154352816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154352800_154355700
ES.3792.1	chr10	-	2942	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	45	-1028	-6	1028	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATTGGTACTTCAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	116899674	116885877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.12	chr10	-	2078	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTACTGATCTGTA	NA	False	NA	-10	True	AATAAA	-20	NA	116899291	116886904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
ES.3792.13	chr10	-	3717	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-18	1	intron_retention	FALSE	canonical	3	1936	junction_7	224.953147049218	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTCTTACTGATCTGTA	NA	False	NA	-10	True	AATAAA	-20	NA	116899737	116886904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.16	chr10	-	2978	13	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	1936	junction_7	250.950014389763	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTCTTACTGATCTG	NA	False	NA	-12	True	AATAAA	-18	NA	116899685	116886906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893824_116894002_116894104_116896552_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.18	chr10	-	1860	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-12	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	619.556386098598	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTCTTACTGATCTG	NA	False	NA	-12	True	AATAAA	-18	NA	116899680	116886906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890875_116891059_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.2	chr10	-	2025	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	-54	-12	-54	12	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTATATATCCTGTT	NA	False	NA	1	True	AATAAA	-31	NA	116899773	116886893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.20	chr10	-	2001	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_15	617.067278881863	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAATGTCTTACTGATCT	NA	False	NA	-13	True	AATAAA	-17	NA	116899674	116886907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116899045_116899610
ES.3792.21	chr10	-	4710	12	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-12	2	intron_retention	FALSE	canonical	3	1936	junction_6	247.924941987498	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTAATGTCTTACTGATC	NA	False	NA	-14	True	AATAAA	-16	NA	116899680	116886908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893824_116894002_116894104_116896552_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.22	chr10	-	4408	11	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-19	1	intron_retention	FALSE	canonical	3	1936	junction_5	264.910192329401	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTAATGTCTTACTGAT	NA	False	NA	-15	True	AATAAA	-15	NA	116899687	116886909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116893183_116893695_116893824_116894002_116894104_116896552_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.23	chr10	-	2054	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	783.751406165671	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899265	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898796_116898880_116898956_116899064
ES.3792.25	chr10	-	2504	14	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	1936	junction_7	243.184153563464	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899662	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893824_116894002_116894104_116896552_116896756_116897202_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.26	chr10	-	1902	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	617.537093802649	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899729	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899672
ES.3792.27	chr10	-	9419	8	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-12	0	intron_retention	TRUE	non_canonical	0	0	junction_2	1054.83740888521	1021	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899680	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116890045_116890781_116894362_116894469_116896756_116897202_116897316_116897409_116897487_116897929_116898014_116898880_116898956_116899610
ES.3792.28	chr10	-	4474	14	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	23	0	intron_retention	FALSE	canonical	3	1936	junction_8	237.721830379655	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899696	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116896756_116897202_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.29	chr10	-	3056	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	19	0	intron_retention	FALSE	canonical	3	239	junction_14	575.147988941693	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899261	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
ES.3792.3	chr10	-	4921	5	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-483	4	intron_retention	FALSE	canonical	3	2214	junction_4	161.534052137622	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTGATCTGTATAT	2720	False	NA	-7	True	AATAAA	-23	NA	116894212	116886901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116890045_116890781_116890886_116891011_116892065_116893078_116893183_116893695
ES.3792.30	chr10	-	1982	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	610.171851930986	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899716	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887213_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.33	chr10	-	2664	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-24	0	intron_retention	FALSE	canonical	3	1936	junction_7	221.861845686519	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899692	116886910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.36	chr10	-	1897	16	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	815.551755970562	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTAATGTCTTACTG	NA	False	NA	-17	True	AATAAA	-13	NA	116899669	116886911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891136_116891940_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896747_116897198_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.37	chr10	-	1855	14	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	830.719521304828	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTAATGTCTTACTG	NA	False	NA	-17	True	AATAAA	-13	NA	116899265	116886911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897929_116898042_116898721_116898788_116898880_116898956_116899064
ES.3792.39	chr10	-	4144	14	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	1936	junction_7	229.721416054496	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTAATGTCTTACTG	NA	False	NA	-17	True	AATAAA	-13	NA	116899724	116886911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.40	chr10	-	3225	14	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	1936	junction_6	240.726513782487	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTAATGTCTTACTG	NA	False	NA	-17	True	AATAAA	-13	NA	116899674	116886911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116892065_116893078_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.5	chr10	-	3482	13	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	-17	2	intron_retention	FALSE	canonical	3	1936	junction_7	245.307290284383	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTACTGATCTGTAT	NA	False	NA	-9	True	AATAAA	-21	NA	116899685	116886903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116893183_116893695_116893824_116894002_116894104_116896552_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ES.3792.6	chr10	-	1877	15	NNC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	324	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	632.616614239813	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTACTGATCTGTAT	NA	False	NA	-9	True	AATAAA	-21	NA	116898956	116886903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892089_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ES.3792.8	chr10	-	3364	12	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	18	2	intron_retention	FALSE	canonical	3	239	junction_11	648.679000955782	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTACTGATCTGTAT	NA	False	NA	-9	True	AATAAA	-21	NA	116899262	116886903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116897487_116897929_116898956_116899064
ES.37920.1	chrX	-	177	1	Intergenic	novelGene_31067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	154953308	154953131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_154953100_154953300
ES.37921.1	chrX	-	221	1	Intergenic	novelGene_31068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAGAAACTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	155253656	155253435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_155253400_155253700
ES.37922.1	chrX	-	213	1	Intergenic	novelGene_31069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTTGTTGAAACAT	NA	False	NA	NA	False	ATTAAA	-5	NA	155309330	155309117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_155309100_155309300
ES.37923.1	chrX	-	7776	1	Intergenic	novelGene_31070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGAGCATAGTTTATCC	NA	False	NA	NA	False	NA	NA	NA	156210737	156202961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156203000_156210700
ES.37924.1	chrX	-	179	1	Intergenic	novelGene_31071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	156218948	156218769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156218800_156218900
ES.37925.1	chrX	-	176	1	Intergenic	novelGene_31072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTGAACTGAA	NA	False	NA	NA	False	NA	NA	NA	156221947	156221771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156221800_156221900
ES.37926.1	chrX	-	682	1	Genic_Genomic	ENSMUSG00000071708.12	novel	NA	NA	NA	NA	16834	509	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTGGTTGCCTACTGT	8211	False	NA	NA	False	CATAAA	-17	NA	156227023	156226341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_156226300_156227000
ES.37926.12	chrX	-	3406	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.771077165081	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCGTCTCCATTATGCC	NA	False	NA	-3	True	AATAAA	-12	NA	156275037	156226849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243474_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156274900
ES.37926.14	chrX	-	3824	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.292386899165	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	False	NA	-4	True	AATAAA	-11	NA	156275303	156226850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229260_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.15	chrX	-	3378	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	144.681856174756	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	False	NA	-4	True	AATAAA	-11	NA	156275040	156226850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.16	chrX	-	3376	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	3	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGAATAGTCATGTCCT	NA	False	NA	-99	True	AATAAA	-25	NA	156275037	156226945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.17	chrX	-	3155	9	NNC	ENSMUSG00000071708.12	novel	1540	10	NA	NA	28	-96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	201.956330366245	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAATAGTCATGTCC	NA	False	NA	-100	True	AATAAA	-24	NA	156275012	156226946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.18	chrX	-	3910	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	3	-342	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGGTGTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	156275059	156227192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.19	chrX	-	2220	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-41	524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCAGGCTCAAGTTTCA	NA	False	NA	NA	False	AGTAAA	-21	NA	156275103	156228167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.2	chrX	-	3785	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-29	39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTATGTTCTGGCTT	NA	False	NA	35	True	NA	NA	NA	156275312	156226811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.20	chrX	-	1959	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-36	47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	141.867156170835	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTCCCTTTATTTC	NA	False	NA	1	True	ATTAAA	-22	NA	156275319	156228644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.21	chrX	-	4588	5	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-271	45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	209.18950738505	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGTTTGTCCCTTTATT	NA	False	NA	-1	True	ATTAAA	-20	NA	156244128	156228646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156240377
ES.37926.22	chrX	-	1823	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	1	44	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	144.681856174756	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTTGTCCCTTTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	156275282	156228647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156244177_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.23	chrX	-	6308	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	0	44	intron_retention	FALSE	non_canonical	0	0	junction_4	148.05262661268	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTTGTCCCTTTAT	NA	False	NA	-2	True	ATTAAA	-19	NA	156275040	156228647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239141_156239486_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.26	chrX	-	2019	12	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	2	43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	200.882639147199	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGGTGTTTGTCCCTTTA	NA	False	NA	-3	True	ATTAAA	-18	NA	156275281	156228648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156259842_156259945_156274900
ES.37926.27	chrX	-	2499	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-42	43	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGGTGTTTGTCCCTTTA	NA	False	NA	-3	True	ATTAAA	-18	NA	156275104	156228648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.3	chrX	-	3706	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	184.400542298552	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTCCATTATGCCTG	NA	False	NA	-1	True	AATAAA	-14	NA	156275281	156226847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248869_156249389_156249488_156252983_156253105_156274900
ES.37926.30	chrX	-	6604	9	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	44	38	intron_retention	FALSE	canonical	3	418	junction_3	34.4490112339963	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTACGGTGTTTGTCC	NA	False	NA	-8	True	ATTAAA	-13	NA	156274996	156228653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.32	chrX	-	1661	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-1	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	185.414913100322	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTTACGGTGTTTGT	NA	False	NA	-10	True	ATTAAA	-11	NA	156275041	156228655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244318_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.33	chrX	-	2826	5	ISM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	22023	0	-9160	0	3prime_fragment	FALSE	canonical	3	428	junction_1	10.3289641300568	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGATGGCACTGTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	156253017	156241869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983
ES.37926.34	chrX	-	2006	6	FSM	ENSMUSG00000071708.12	ENSMUST00000127089.2	3053	6	6	1041	6	-1041	multi-exon	FALSE	canonical	3	428	junction_1	22.6680391741324	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCAATTTGTTTCTG	NA	False	NA	NA	False	ATTAAA	-8	NA	156275034	156242910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.35	chrX	-	252	1	Intergenic	novelGene_31073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTATTCGTATGCT	NA	False	NA	NA	False	AATGAA	-15	NA	156262781	156262529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156262500_156262800
ES.37926.4	chrX	-	3461	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	261	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	181.862475513779	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTCTCCATTATGCCTG	NA	False	NA	-1	True	AATAAA	-14	NA	156274107	156226847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156273983
ES.37926.6	chrX	-	3749	11	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-332	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	181.862475513779	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCTCCATTATGCCT	NA	False	NA	-2	True	AATAAA	-13	NA	156274700	156226848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274287
ES.37926.7	chrX	-	4499	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-21	2	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCTCCATTATGCCT	NA	False	NA	-2	True	AATAAA	-13	NA	156275304	156226848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ES.37926.8	chrX	-	3284	10	NNC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	-9202	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	191.662318791265	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCTCCATTATGCCT	NA	False	NA	-2	True	AATAAA	-13	NA	156253059	156226848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243329_156243411_156244169_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983
ES.37926.9	chrX	-	3770	3	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	4796	2	intron_retention	FALSE	canonical	3	418	junction_2	36	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCGTCTCCATTATGCCT	NA	False	NA	-2	True	AATAAA	-13	NA	156239061	156226848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156230467_156237829_156237910_156238989
ES.37927.1	chrX	-	176	1	Intergenic	novelGene_31074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACTTCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	156317945	156317769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156317800_156317900
ES.37928.1	chrX	-	2264	1	Intergenic	novelGene_31075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	156323108	156320844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156320800_156323100
ES.37928.2	chrX	-	4189	1	Antisense	novelGene_ENSMUSG00000082002.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATCCCGTCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	156326334	156322145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_156322100_156326300
ES.37929.1	chrX	+	2990	4	Antisense	novelGene_ENSMUSG00000046873.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAACCAAACAAAAAA	NA	False	NA	NA	False	AAAAAG	-37	NA	156333031	156340194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_156334143_156335906_156335988_156337878_156338075_156338592
ES.37929.2	chrX	+	2675	3	Antisense	novelGene_ENSMUSG00000046873.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACACAAAAAACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156333031	156339361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_156334143_156335906_156335988_156337878
ES.37929.3	chrX	+	665	2	Antisense	novelGene_ENSMUSG00000046873.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156337958	156339141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_156338075_156338592
ES.37929.4	chrX	+	885	2	Antisense	novelGene_ENSMUSG00000046873.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACACAAAAAACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	156337958	156339361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_156338075_156338592
ES.3793.1	chr10	+	3507	2	Antisense	novelGene_ENSMUSG00000020170.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1231	False	NA	NA	False	AGTAAA	-11	NA	116915609	116923034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116917023_116920940
ES.3793.2	chr10	+	239	1	Intergenic	novelGene_2877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTATAGTTCTGCTG	2278	False	NA	NA	False	NA	NA	NA	116916656	116916895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116916700_116916900
ES.3793.3	chr10	+	3660	1	Antisense	novelGene_ENSMUSG00000020170.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAGAAAAATCCATTTT	5018	False	NA	NA	False	AGTAAA	-33	NA	116919396	116923056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_116919400_116923100
ES.37930.1	chrX	+	1303	1	Intergenic	novelGene_31076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGGCTGGAGTGAGCG	NA	False	NA	NA	False	NA	NA	NA	156344991	156346294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156345000_156346300
ES.37931.1	chrX	+	176	1	Intergenic	novelGene_31077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATTTAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	156356477	156356653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156356500_156356700
ES.37932.1	chrX	+	1011	1	Intergenic	novelGene_31078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGGTTTGGGCTATT	NA	False	NA	NA	False	NA	NA	NA	156381851	156382862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156381900_156382900
ES.37932.2	chrX	+	766	2	Intergenic	novelGene_31079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGGTTTGGGCTATT	NA	False	NA	NA	False	NA	NA	NA	156381887	156382862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156382569_156382777
ES.37933.1	chrX	-	5686	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	33	-922	-3	922	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTGTCAGTGTATTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	156381678	156329897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.10	chrX	-	4855	7	ISM	ENSMUSG00000046873.19	ENSMUST00000065857.6	1737	9	3	12454	3	-1	intron_retention	FALSE	canonical	1	5	junction_6	78.4191019813129	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTCTGTATCATATT	NA	False	NA	-6	True	AATAAA	-34	NA	156351998	156330820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156351136
ES.37933.11	chrX	-	4692	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	406	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.5712584333502	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTCTGTATCATATT	NA	False	NA	-6	True	AATAAA	-34	NA	156381233	156330820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381117
ES.37933.12	chrX	-	4562	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	69.763268130492	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156381659	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.13	chrX	-	4718	8	ISM	ENSMUSG00000046873.19	ENSMUST00000065857.6	1737	9	22	12455	22	-2	5prime_fragment	FALSE	canonical	1	5	junction_6	89.9317201309654	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156351979	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156351136_156351813_156351929
ES.37933.15	chrX	-	4392	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	73.7460804043171	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156381659	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156381491
ES.37933.16	chrX	-	2265	9	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	3648	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	72.1227252674218	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156359131	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156332021_156333927_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079
ES.37933.17	chrX	-	4399	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	78.9600373606801	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156381645	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.18	chrX	-	4585	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	363	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.9888537325633	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTTCTGTATCATAT	NA	False	NA	-7	True	AATAAA	-33	NA	156381276	156330821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381117
ES.37933.2	chrX	-	5008	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	-166	-45	-166	45	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTCTTGTCAGTGTCCT	NA	False	NA	40	True	NA	NA	NA	156381877	156330774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.20	chrX	-	4451	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	74.2040051142794	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATCTTCTGTATCATA	NA	False	NA	-8	True	AATAAA	-32	NA	156381668	156330822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.21	chrX	-	4548	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	74.7414878096496	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATCTTCTGTATCAT	NA	False	NA	-9	True	AATAAA	-31	NA	156381659	156330823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156337920_156337963_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.22	chrX	-	4665	12	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.9605780162064	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATCTTCTGTATCAT	NA	False	NA	-9	True	AATAAA	-31	NA	156381644	156330823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156333825_156333885_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.23	chrX	-	4726	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	67.3415919027758	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATCTTCTGTATCAT	NA	False	NA	-9	True	AATAAA	-31	NA	156381659	156330823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374364_156374552_156376720_156376870_156381491
ES.37933.24	chrX	-	4508	8	NNC	ENSMUSG00000046873.19	novel	1737	9	NA	NA	22	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.1477831181151	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTACGTTTATCATCT	NA	False	NA	-19	True	AATAAA	-21	NA	156351979	156330833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156351334_156351813_156351929
ES.37933.25	chrX	-	3513	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-11	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.9441621832733	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTACGTTTATCATC	NA	False	NA	-20	True	AATAAA	-20	NA	156381658	156330834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156333180_156337961_156338075_156338592_156338688_156341880_156342062_156344378_156344408_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.26	chrX	-	4278	8	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-11	-17	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	84.2321863926717	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTTTACGTTTATCA	NA	False	NA	-22	True	AATAAA	-18	NA	156381658	156330836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.27	chrX	-	3266	8	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-3	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.8804847041522	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTTTACGTTTATCA	NA	False	NA	-22	True	AATAAA	-18	NA	156381642	156330836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156333179_156338648_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.28	chrX	-	4588	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	254	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	89.3559734992574	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCATTTTACGTTTATC	NA	False	NA	-23	True	AATAAA	-17	NA	156381385	156330837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341930_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381306
ES.37933.29	chrX	-	5031	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	3166	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	69.5712584333502	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAGCATTTTACGT	NA	False	NA	-28	True	AATAAA	-12	NA	156378473	156330842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156377996
ES.37933.30	chrX	-	4187	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	5	-420	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTGTTGTCTCTTT	NA	False	NA	NA	False	AATGAA	-25	NA	156381670	156331239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.31	chrX	-	4319	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	171	-420	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	69.0144912319145	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTGTTGTCTCTTT	NA	False	NA	NA	False	AATGAA	-25	NA	156381468	156331239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381306
ES.37933.32	chrX	-	4339	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	33	425	-3	-425	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTATCTTTTTGTGTTGTC	NA	False	NA	NA	False	AATGAA	-20	NA	156381678	156331244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.33	chrX	-	4105	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	3538	-428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.9888537325633	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTATCTTTTTGTGTT	NA	False	NA	NA	False	AATGAA	-17	NA	156378101	156331247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156377996
ES.37933.34	chrX	-	4122	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-10	-430	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	76.1004858763549	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGTATCTTTTTGTG	NA	False	NA	NA	False	AATGAA	-15	NA	156381657	156331249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344456_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.35	chrX	-	4116	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	404	-430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.9888537325633	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGTATCTTTTTGTG	NA	False	NA	NA	False	AATGAA	-15	NA	156381235	156331249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381117
ES.37933.36	chrX	-	3881	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-11	-533	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	78.9600373606801	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCTGGTGTATTATCA	NA	False	NA	NA	False	AGTAAA	-15	NA	156381658	156331352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.37	chrX	-	4060	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-536	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTCCCTGGTGTATTA	NA	False	NA	NA	False	AGTAAA	-12	NA	156381659	156331355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.38	chrX	-	4194	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	53	550	-11	-550	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTGGAATGTCTTATG	NA	False	NA	NA	False	AATATA	-13	NA	156381658	156331369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.39	chrX	-	2627	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	53	2117	-11	-2117	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGGCTTGTGATGTGA	NA	False	NA	NA	False	AGTAAA	-18	NA	156381658	156332936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.4	chrX	-	4784	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	131	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	69.0144912319145	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATCATATTTTTTAC	NA	False	NA	0	True	AATAAA	-40	NA	156381508	156330814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381306
ES.37933.40	chrX	-	2464	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	2	-2117	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGGCTTGTGATGTGA	NA	False	NA	NA	False	AGTAAA	-18	NA	156381644	156332936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.41	chrX	-	1777	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	7	-2828	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACCATTTTGTGTGACC	NA	False	NA	NA	False	NA	NA	NA	156381668	156333647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.42	chrX	-	1871	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	52	2874	-12	-2874	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTTTGTTGAATAATT	NA	False	NA	NA	False	TTTAAA	-19	NA	156381659	156333693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.43	chrX	-	1668	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	69	3060	-3	-3060	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCTGTTGCCATTGAAA	NA	False	NA	NA	False	AGTAAA	-11	NA	156381642	156333879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.44	chrX	-	2831	11	NNC	ENSMUSG00000046873.19	novel	2379	5	NA	NA	-5	-3581	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	69.4139035064302	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAGTGGCTATTTAT	NA	False	NA	NA	False	NA	NA	NA	156381680	156334400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156335793_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.45	chrX	-	1230	7	ISM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	8	10926	8	7196	5prime_fragment	FALSE	canonical	3	154	junction_5	38.2771327150936	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTGGTATGTTGGATA	NA	False	NA	NA	False	AATAAA	-22	NA	156381703	156341745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.46	chrX	-	3635	6	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-12	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	99.5630453531831	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTGTTTAGATGAATG	NA	False	NA	NA	False	AATAAA	-12	NA	156381659	156348944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.47	chrX	-	7333	6	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	7	-167	intron_retention	FALSE	canonical	0	0	junction_1	90.6831847698348	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381668	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156355683_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.48	chrX	-	3484	6	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	2	-167	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	99.5630453531831	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381673	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.5	chrX	-	4649	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	2	3	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTATCATATTTTTT	NA	False	NA	-2	True	AATAAA	-38	NA	156381709	156330816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.50	chrX	-	3763	6	FSM	ENSMUSG00000046873.19	ENSMUST00000179062.8	3890	6	-40	167	-11	-167	multi-exon	FALSE	canonical	3	30	junction_1	80.1164152967418	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381686	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.51	chrX	-	3586	5	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-11	-167	intron_retention	FALSE	canonical	3	30	junction_1	95.2664027871316	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381658	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.52	chrX	-	3453	6	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-11	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.6831847698348	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381658	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156351813_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.53	chrX	-	3630	7	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	5	-167	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	90.1432501940969	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381670	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.54	chrX	-	3592	7	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-11	-167	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	95.8882451375327	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381658	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156351787_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.55	chrX	-	7063	6	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	14	-167	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	105.864819463314	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGCTTGTGTGAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	156381661	156349109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156351813_156351929_156355686_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.56	chrX	-	1908	6	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	-13	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.6831847698348	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156381660	156349114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156350271_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.58	chrX	-	3329	4	FSM	ENSMUSG00000091736.4_ENSMUSG00000046873.19	ENSMUST00000134211.8	380	4	-2	-2947	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	109.112582022219	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156362781	156349114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156352095_156355854_156355983_156359079_156359184_156362664
ES.37933.59	chrX	-	2855	8	NNC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	37	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.6399048566116	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156381602	156349114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156350435_156351136_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.6	chrX	-	4556	10	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	76.1004858763549	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTGTATCATATTTTT	NA	False	NA	-3	True	AATAAA	-37	NA	156381659	156330817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344456_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.61	chrX	-	3386	5	FSM	ENSMUSG00000046873.19	ENSMUST00000139786.8	2379	5	3	-1010	2	1010	multi-exon	FALSE	canonical	3	154	junction_3	45.1386752131695	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTTTTATACTAATGC	NA	False	NA	NA	False	NA	NA	NA	156381644	156353204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.62	chrX	-	2714	5	NNC	ENSMUSG00000046873.19	novel	2379	5	NA	NA	47	708	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	105.151081782357	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCATTGTAGTAGTGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	156381592	156353506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156355686_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.63	chrX	-	2471	6	NNC	ENSMUSG00000046873.19	novel	2379	5	NA	NA	5	238	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	90.3251902848812	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTATCTGTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	156381670	156353976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156355686_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.64	chrX	-	636	4	FSM	ENSMUSG00000046873.19	ENSMUST00000149249.2	529	4	7	-114	7	114	multi-exon	FALSE	canonical	3	97	junction_3	71.2242156073964	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTATCTGTTATTTG	NA	False	NA	NA	False	AATAAA	-18	NA	156381668	156355829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.7	chrX	-	4724	11	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	67.6301707819816	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381680	156330819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344456_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ES.37933.8	chrX	-	4476	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	81.0293156826589	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTCTGTATCATATT	NA	False	NA	-6	True	AATAAA	-34	NA	156381659	156330820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156355854_156355983_156359079_156359184_156374349_156374552_156381491
ES.37933.9	chrX	-	3591	6	NNC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	10027	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.4213243203398	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTCTGTATCATATT	NA	False	NA	-6	True	AATAAA	-34	NA	156341974	156330820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156332891_156333086_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880
ES.37934.1	chrX	-	177	1	Intergenic	novelGene_31080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	156382336	156382159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156382200_156382300
ES.37935.1	chrX	-	159	1	Intergenic	novelGene_31081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAACAAATTTCAA	NA	False	NA	NA	False	NA	NA	NA	156387337	156387178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156387200_156387300
ES.37936.1	chrX	-	180	1	Intergenic	novelGene_31082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCCATC	NA	False	NA	NA	False	NA	NA	NA	156435768	156435588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156435600_156435800
ES.37937.1	chrX	+	3645	1	FSM	ENSMUSG00000047485.7	ENSMUST00000087157.5	1935	1	-563	-1147	-563	1147	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTAAAAGGTCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	156600867	156604512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_156600900_156604500
ES.37937.2	chrX	+	2761	1	FSM	ENSMUSG00000047485.7	ENSMUST00000087157.5	1935	1	-521	-305	-521	305	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTACCTGTGAATATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	156600909	156603670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_156600900_156603700
ES.37938.1	chrX	+	132	1	Intergenic	novelGene_31083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	156750205	156750337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156750200_156750300
ES.37939.1	chrX	+	170	1	Intergenic	novelGene_31084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAGTGGTAGGG	NA	False	NA	NA	False	NA	NA	NA	156785333	156785503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_156785300_156785500
ES.3794.1	chr10	+	174	1	Intergenic	novelGene_2884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2511	False	NA	NA	False	NA	NA	NA	116968876	116969050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_116968900_116969000
ES.37940.1	chrX	-	4346	1	Antisense	novelGene_ENSMUSG00000047485.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTCTTAAATTGTT	NA	False	NA	NA	False	AATAAA	-31	NA	156602626	156598280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_156598300_156602600
ES.37941.1	chrX	-	5669	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-68	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	4.24381903478459	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGCACCGACTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	156826358	156604421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.10	chrX	-	3163	10	NNC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	56	-71094	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.30696264280817	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTTGCAAACATCT	NA	False	NA	NA	False	AATAAA	-20	NA	156826234	156712667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156714546_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156782348_156782426_156825772
ES.37941.11	chrX	-	5920	6	NNC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	21	-96909	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.55438784326958	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATTTGGATAAGTAGAG	NA	False	NA	NA	False	NA	NA	NA	156826269	156738482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_156739663_156740503_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.12	chrX	-	1385	1	Intergenic	novelGene_31085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156816666	156815281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_156815300_156816700
ES.37941.2	chrX	-	5870	22	FSM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	-126	-6	-126	6	multi-exon	FALSE	canonical	2	5	junction_13	3.75315438004534	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGTAAAGCACCGACTT	NA	False	NA	NA	False	AATAAA	-17	NA	156826416	156604425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.3	chrX	-	5717	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-63	6	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	3.87298334620742	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGTAAAGCACCGACTT	NA	False	NA	NA	False	AATAAA	-17	NA	156826353	156604425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.4	chrX	-	5687	22	FSM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	-83	134	-83	-134	multi-exon	FALSE	canonical	2	5	junction_13	3.75315438004534	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAGTTATAAGACT	NA	False	NA	NA	False	ATTAAA	-17	NA	156826373	156604565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.5	chrX	-	4076	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-196	-1711	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	4.24381903478459	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAATGCTGTAGTTTTAT	NA	False	NA	NA	False	ATTAAA	-34	NA	156826486	156606142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.6	chrX	-	4060	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-126	-1714	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	3.87298334620742	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTAATGCTGTAGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	156826416	156606145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.7	chrX	-	3857	20	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-72	-1716	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	4.36873809883098	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTTTAATGCTGTAGT	NA	False	NA	NA	False	ATTAAA	-29	NA	156826362	156606147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.8	chrX	-	4268	22	FSM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	-252	1722	-252	-1722	multi-exon	FALSE	canonical	2	5	junction_13	3.75315438004534	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGCACAAAGTTTAATGC	NA	False	NA	NA	False	ATTAAA	-23	NA	156826542	156606153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ES.37941.9	chrX	-	4588	1	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-56843	-60549	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGATAGTACAT	NA	False	NA	NA	False	AATAAA	-45	NA	156706710	156702122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_156702100_156706700
ES.37942.1	chrX	+	2191	1	Intergenic	novelGene_31086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	157524501	157526692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_157524500_157526700
ES.37943.1	chrX	+	179	1	Intergenic	novelGene_31087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157572289	157572468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_157572300_157572500
ES.37944.1	chrX	+	2504	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-118	39	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCATTATTTTTATAGGA	NA	False	NA	13	True	AATAAA	-16	NA	158038659	158146775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.10	chrX	+	3007	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	33	4204	33	300	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGATTAACAGTATTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	158038886	158147036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.11	chrX	+	7132	23	NIC	ENSMUSG00000031309.16	novel	7244	22	NA	NA	-65	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.2870603739252	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTTCGTTTCTTTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	158039056	158151237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158039185_158061105_158061200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.12	chrX	+	6589	23	NIC	ENSMUSG00000031309.16	novel	7244	22	NA	NA	-41	-465	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.4924668444254	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTGCATTTTTGGC	NA	False	NA	NA	False	AATAAA	-27	NA	158039080	158150775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158039185_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.13	chrX	+	178	1	Intergenic	novelGene_31088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	158057139	158057317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158057100_158057300
ES.37944.14	chrX	+	1744	13	ISM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	76292	4465	28869	39	3prime_fragment	FALSE	canonical	3	29	junction_1	10.8704492394136	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCATTATTTTTATAGGA	NA	False	NA	13	True	AATAAA	-16	NA	158115145	158146775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.15	chrX	+	5493	2	FSM	ENSMUSG00000031309.16	ENSMUST00000149939.2	755	2	341	-5079	341	575	multi-exon	FALSE	canonical	3	62	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGGTATTTTGGCTTCC	NA	False	NA	NA	False	AATAAA	-19	NA	158145742	158151815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158145779_158146358
ES.37944.2	chrX	+	6971	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-118	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTCTTTTTATCCGTT	NA	False	NA	NA	False	AATAAA	-18	NA	158038659	158151242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.3	chrX	+	2905	24	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-117	298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.7252907214328	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGGATTAACAGTATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158038660	158147034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158038716_158061105_158061200_158062150_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.4	chrX	+	3380	24	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-108	32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4676460017611	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAAACTTTCTTATTCT	NA	False	NA	NA	False	AATAAA	-26	NA	158038669	158147530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158038716_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.5	chrX	+	3313	24	NIC	ENSMUSG00000031309.16	novel	7244	22	NA	NA	-70	296	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.3806331311381	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCTGGATTAACAGTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	158038707	158147032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158039185_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.6	chrX	+	2900	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-122	4466	-46	38	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGCATTATTTTTATAGG	NA	False	NA	12	True	AATAAA	-15	NA	158038731	158146774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.7	chrX	+	7413	24	NIC	ENSMUSG00000031309.16	novel	7244	22	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.3806331311381	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTTTCTTTTTATCCG	NA	False	NA	NA	False	AATAAA	-16	NA	158038815	158151240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158039185_158061105_158061200_158062162_158062200_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.8	chrX	+	3559	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	-32	3717	-32	25	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGGATTTAAACTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	158038821	158147523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37944.9	chrX	+	7214	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	30	0	30	0	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTTTCTTTTTATCCG	NA	False	NA	NA	False	AATAAA	-16	NA	158038883	158151240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ES.37945.1	chrX	-	176	1	Intergenic	novelGene_31089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAACAAATAACTATA	NA	False	NA	NA	False	NA	NA	NA	158114693	158114517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158114500_158114700
ES.37946.1	chrX	-	178	1	Intergenic	novelGene_31090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTCTAT	NA	False	NA	NA	False	NA	NA	NA	158141232	158141054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158141100_158141200
ES.37947.1	chrX	+	4880	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	-17	309	-17	-309	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGTATATAGTTGTTTGT	5330	False	NA	NA	False	NA	NA	NA	158155156	158172615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.10	chrX	+	2494	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	21	2657	21	-2657	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACAGTGGTGCAGTGTA	5368	False	NA	NA	False	CATAAA	-12	NA	158155194	158170267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.11	chrX	+	2903	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	24	2245	24	-2245	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTCTGGTGGTTTTCT	5371	False	NA	NA	False	NA	NA	NA	158155197	158170679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.12	chrX	+	2997	8	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	26	-2099	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	905.021930053383	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCTTTGATGTGTATTT	5373	False	NA	NA	False	AATACA	-22	NA	158155199	158170825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403_158169841_158169890
ES.37947.13	chrX	+	3157	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	35	-1929	combination_of_known_splicesites	FALSE	canonical	1	31	junction_3	1014.80019708315	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAATAATGGTTTTTTG	5382	False	NA	NA	False	AATAAA	-12	NA	158155208	158170995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158155412_158159376_158159461_158160454_158160559_158162725_158162808_158165683_158165776_158168403
ES.37947.14	chrX	+	4718	2	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	35	594	intron_retention	FALSE	canonical	0	0	junction_1	0	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGTAAAGGTGTGAGT	5382	False	NA	NA	False	AATAAA	-32	NA	158155208	158160148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158159461_158159682
ES.37947.15	chrX	+	1838	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	36	3298	36	-3298	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATAAATTAATGCTT	5383	False	NA	NA	False	TATAAA	-43	NA	158155209	158169626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.16	chrX	+	1630	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	36	-3422	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAAAGATGGTATTGGA	5383	False	NA	NA	False	AAGAAA	-38	NA	158155209	158169502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.17	chrX	+	3156	8	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	36	-1927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	905.021930053383	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAATGGTTTTTTGTT	5383	False	NA	NA	False	AATAAA	-14	NA	158155209	158170997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403_158169806_158169858
ES.37947.18	chrX	+	686	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	36	-4366	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGATACGCTAAGTCCAC	5383	False	NA	23	True	NA	NA	NA	158155209	158168558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.19	chrX	+	5142	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	36	-6	36	6	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGGCCAACGTGTTC	5383	False	NA	NA	False	AATATA	-17	NA	158155209	158172930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.2	chrX	+	3262	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	-12	1922	-12	-1922	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTTTTTTGTTTTGTG	5335	False	NA	NA	False	AATAAA	-19	NA	158155161	158171002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.20	chrX	+	3032	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	36	2104	36	-2104	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGAGTTCTTTGATGTG	5383	False	NA	NA	False	AATACA	-17	NA	158155209	158170820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.21	chrX	+	875	7	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	36	-4255	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	961.903956859635	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCATTTGCCTTGTG	5383	False	NA	-17	True	AGTAAA	-12	NA	158155209	158168669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158155412_158159382_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.22	chrX	+	3124	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	36	-1928	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATAATGGTTTTTTGT	5383	False	NA	NA	False	AATAAA	-13	NA	158155209	158170996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.23	chrX	+	3240	7	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	37	-1927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	937.639885860001	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAATGGTTTTTTGTT	5384	False	NA	NA	False	AATAAA	-14	NA	158155210	158170997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158155412_158159376_158159461_158160422_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.24	chrX	+	1672	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	51	3449	51	-3449	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGTGCGTAGAATATT	5398	False	NA	NA	False	AAGAAA	-11	NA	158155224	158169475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.25	chrX	+	3184	6	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	51	-1919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1027.0251408802	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTTGTTTTGTGGAG	5398	False	NA	NA	False	AATAAA	-22	NA	158155224	158171005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158155412_158159376_158159461_158160454_158160563_158162696_158162808_158165683_158165776_158168403
ES.37947.26	chrX	+	1649	5	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	4230	-4252	intron_retention	FALSE	canonical	3	2276	junction_4	158.91585823951	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTTGCCTTGTGCTC	9577	False	NA	-14	True	AGTAAA	-15	NA	158159403	158168672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.27	chrX	+	619	5	NNC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	5279	-4229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1102.54353655536	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTATGACTAAGCCCT	NA	False	NA	9	True	AATAAA	-21	NA	158160452	158168695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158160559_158161534_158161586_158162725_158162808_158165683_158165772_158168403
ES.37947.28	chrX	+	4543	5	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	5279	309	5279	-309	3prime_fragment	FALSE	canonical	3	2276	junction_4	158.91585823951	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGTATATAGTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	158160452	158172615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.29	chrX	+	2640	4	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	6359	2108	6359	-2108	3prime_fragment	FALSE	canonical	3	2276	junction_3	179.59274917311	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGAAGAGTTCTTTGA	NA	False	NA	NA	False	AATACA	-13	NA	158161532	158170816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.3	chrX	+	966	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	6	4200	6	-4200	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTTGACTGGACAGTC	5353	False	NA	38	True	TATAAA	-25	NA	158155179	158168724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.30	chrX	+	493	4	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	6359	4255	6359	-4255	3prime_fragment	FALSE	canonical	3	2276	junction_3	179.59274917311	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCATTTGCCTTGTG	NA	False	NA	-17	True	AGTAAA	-12	NA	158161532	158168669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.31	chrX	+	164	1	Intergenic	novelGene_31091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	158164899	158165063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158164900_158165100
ES.37947.32	chrX	+	3338	1	Genic_Genomic	ENSMUSG00000067194.7	novel	NA	NA	NA	NA	14878	465	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTTCTTTGTGAGTTT	NA	False	NA	NA	False	TATAAA	-16	NA	158170051	158173389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_158170100_158173400
ES.37947.4	chrX	+	841	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	17	-4230	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGTATGACTAAGCCC	5364	False	NA	8	True	AATAAA	-20	NA	158155190	158168694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.5	chrX	+	3924	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	17	1231	17	-1231	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTGAATAGAAATTGTC	5364	False	NA	NA	False	AATAAA	-24	NA	158155190	158171693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.6	chrX	+	800	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	18	4354	18	-4354	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCACTTTGTTGATTCG	5365	False	NA	35	True	NA	NA	NA	158155191	158168570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37947.8	chrX	+	2071	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	18	3083	18	-3083	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTGAATCAAAGAGCTA	5365	False	NA	NA	False	CATAAA	-14	NA	158155191	158169841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ES.37948.1	chrX	-	6006	1	Antisense	novelGene_ENSMUSG00000067194.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCCAATTTTCTACTA	NA	False	NA	NA	False	NA	NA	NA	158170401	158164395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_158164400_158170400
ES.37949.1	chrX	-	236	1	Intergenic	novelGene_31092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGCTGGAATCCCAAT	NA	False	NA	NA	False	NA	NA	NA	158189947	158189711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158189700_158189900
ES.3795.1	chr10	-	6459	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-35	-4	-11	4	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTTACTGTATTTAT	NA	False	NA	-1	True	AATAAA	-32	NA	116984450	116905327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.10	chr10	-	5678	7	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-6	-594	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	43.6030070318805	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGGCTTTGTGGA	NA	False	NA	0	True	AATAAA	-20	NA	116984421	116905925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116984296
ES.3795.11	chr10	-	5799	9	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	7	-595	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	38.4285050450834	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGAGTGTGGCTTTGTGG	NA	False	NA	-1	True	AATAAA	-19	NA	116984432	116905926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116938017_116938104_116984296
ES.3795.12	chr10	-	5788	8	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	0	-600	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	41.1180480756446	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCCGAGTGTGGCTT	NA	False	NA	-6	True	AATAAA	-14	NA	116984439	116905931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116938005_116938104_116984296
ES.3795.13	chr10	-	9216	10	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	2	-688	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	36.9534241384416	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCCCCTCTGTCTT	NA	False	NA	-2	True	AATAAA	-28	NA	116984413	116906019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116920505_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.14	chr10	-	6595	11	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	11	-689	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	43.8256774049187	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTGGCCCCTCTGTCT	NA	False	NA	-3	True	AATAAA	-27	NA	116984428	116906020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116919653_116920505_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.15	chr10	-	5728	9	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	11	-695	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.6516077858137	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCCCTCTGGCCCCT	NA	False	NA	-9	True	AATAAA	-21	NA	116984428	116906026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116936515_116936574_116938017_116938104_116984296
ES.3795.16	chr10	-	5742	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-17	695	7	-695	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCCCTCTGGCCCCT	NA	False	NA	-9	True	AATAAA	-21	NA	116984432	116906026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.17	chr10	-	5842	10	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-8	-698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.2332025571724	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTGGCCCTCTGGCC	NA	False	NA	-12	True	AATAAA	-18	NA	116984423	116906029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935735_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.18	chr10	-	6420	7	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	39272	-698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.6030070318805	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTGGCCCTCTGGCC	4380	False	NA	-12	True	AATAAA	-18	NA	116927479	116906029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116926508
ES.3795.19	chr10	-	5545	7	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	6	-700	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	43.6030070318805	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGTCACTGGCCCTCTGG	NA	False	NA	-14	True	AATAAA	-16	NA	116984394	116906031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116984296
ES.3795.23	chr10	-	5924	11	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-1	-703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	45.2770361220785	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCGTCACTGGCCCTC	NA	False	NA	-17	True	AATAAA	-13	NA	116984416	116906034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116950207_116950414_116984296
ES.3795.25	chr10	-	5834	11	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	4	-703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.2770361220785	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCGTCACTGGCCCTC	NA	False	NA	-17	True	AATAAA	-13	NA	116984396	116906034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116929266_116929403_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.26	chr10	-	5703	10	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	5897	-703	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	37.7097426583373	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCGTCACTGGCCCTC	NA	False	NA	-17	True	AATAAA	-13	NA	116960854	116906034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116960749
ES.3795.27	chr10	-	5751	9	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	6	-703	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.6516077858137	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGCGTCACTGGCCCTC	NA	False	NA	-17	True	AATAAA	-13	NA	116984394	116906034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921094_116936515_116936574_116938017_116938104_116984296
ES.3795.28	chr10	-	4776	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-13	1657	11	-1657	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCCTTATGTGTTCATC	NA	False	NA	NA	False	TATAAA	-34	NA	116984428	116906988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.29	chr10	-	2092	6	FSM	ENSMUSG00000020170.5	ENSMUST00000219483.2	2145	6	1	52	1	-52	multi-exon	FALSE	canonical	1	1	junction_1	43.0330105848987	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	116984399	116918761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116920505_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.3	chr10	-	6419	9	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	39.6516077858137	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAAGTTTTACTGTATTT	NA	False	NA	-3	True	AATAAA	-30	NA	116984422	116905329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116936515_116936574_116938017_116938104_116984296
ES.3795.30	chr10	-	179	1	Intergenic	novelGene_2878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAGAAAGAAGTG	9546	False	NA	NA	False	NA	NA	NA	116922313	116922134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116922100_116922300
ES.3795.31	chr10	-	2624	1	Intergenic	novelGene_2879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCAGGTGGCG	5705	False	NA	NA	False	NA	NA	NA	116926154	116923530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116923500_116926200
ES.3795.32	chr10	-	218	1	Intergenic	novelGene_2880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATGTCTATAATGATG	NA	False	NA	NA	False	AAAAAG	-22	NA	116933174	116932956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116933000_116933200
ES.3795.33	chr10	-	208	1	Intergenic	novelGene_2881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGTTTTTTAACTTT	7038	False	NA	NA	False	ATTAAA	-26	NA	116943412	116943204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116943200_116943400
ES.3795.34	chr10	-	346	1	Intergenic	novelGene_2882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAGATAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	116960515	116960169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116960200_116960500
ES.3795.35	chr10	-	150	1	Intergenic	novelGene_2883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATTTA	NA	False	NA	NA	False	NA	NA	NA	116960516	116960366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_116960400_116960500
ES.3795.5	chr10	-	9915	10	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-8	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	36.9534241384416	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAAAGTTTTACTGTATT	NA	False	NA	-4	True	AATAAA	-29	NA	116984423	116905330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116920505_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.6	chr10	-	6377	9	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	38.4285050450834	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGTAAAGTTTTACTGTA	NA	False	NA	-6	True	AATAAA	-27	NA	116984416	116905332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116938017_116938104_116984296
ES.3795.7	chr10	-	6315	9	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	38.8247263351591	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACGTAAAGTTTTACTGTA	NA	False	NA	-6	True	AATAAA	-27	NA	116984403	116905332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.8	chr10	-	6121	11	NNC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	-9	-594	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.0981152599529	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGGCTTTGTGGA	NA	False	NA	0	True	AATAAA	-20	NA	116984424	116905925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116923996_116924283_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.3795.9	chr10	-	5845	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-19	594	5	-594	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGGCTTTGTGGA	NA	False	NA	0	True	AATAAA	-20	NA	116984434	116905925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ES.37950.1	chrX	+	3742	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-158	13	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGATGAATATCTAAGG	NA	False	NA	20	True	AATAAA	-31	NA	158197409	158281766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.10	chrX	+	3786	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-11	204	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTGCTGTTGGTTTGTT	NA	False	NA	NA	False	AATACA	-20	NA	158197556	158281957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.12	chrX	+	3839	4	ISM	ENSMUSG00000041020.15	ENSMUST00000112471.9	3670	17	12	36092	12	-7428	intron_retention	FALSE	canonical	3	127	junction_2	13.9124245031395	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAGACTGCTAGGTC	NA	False	NA	NA	False	NA	NA	NA	158197579	158245661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373
ES.37950.15	chrX	+	4647	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	24	0	intron_retention	FALSE	canonical	1	49	junction_5	31.6824969382923	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTTTTGACTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158197591	158281579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030
ES.37950.18	chrX	+	3378	17	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	107	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	62.0089459271805	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTGTGCCATTGAC	NA	False	NA	2	True	AATAAA	-13	NA	158197674	158281748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158198032_158198135_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279123_158280579
ES.37950.19	chrX	+	3233	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	107	0	combination_of_known_splicesites	FALSE	canonical	1	15	junction_11	44.9721001946581	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTTTTGACTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158197674	158281579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.2	chrX	+	3536	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-136	3	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTTTTGACTTGTAC	NA	False	NA	NA	False	ATTAAA	-19	NA	158197431	158281582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.20	chrX	+	3113	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	109	-175	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGCCCCAAGTTGGTC	NA	False	NA	NA	False	AATAAA	-22	NA	158197676	158281404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.21	chrX	+	3277	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	109	-2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_15	45.6783926551226	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTGCCATTGACCTT	NA	False	NA	5	True	AATAAA	-16	NA	158197676	158281751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279123_158280579
ES.37950.23	chrX	+	1511	10	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	118	-1335	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	37.9326889224701	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGGAAAAACAAGAA	NA	False	NA	NA	False	NA	NA	NA	158197685	158272439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272
ES.37950.25	chrX	+	3338	15	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	119	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.933428042916	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTGTGCCATTGAC	NA	False	NA	2	True	AATAAA	-13	NA	158197686	158281748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242376_158242480_158252958_158253090_158255820_158255946_158265073_158265378_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.27	chrX	+	3551	17	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	119	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.4616632796926	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGTGCCATTGACCT	NA	False	NA	4	True	AATAAA	-15	NA	158197686	158281750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158198032_158198135_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.29	chrX	+	3091	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	124	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_15	45.6783926551226	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTGTTTTGACTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	158197691	158281580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279123_158280579
ES.37950.3	chrX	+	3731	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-136	81	combination_of_known_splicesites	FALSE	canonical	1	15	junction_11	44.9721001946581	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGTGTCTGTTTCACT	NA	False	NA	88	True	GATAAA	-42	NA	158197431	158281834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.30	chrX	+	4795	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	125	1349	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTTTAAAAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	158197692	158283102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37950.31	chrX	+	1534	10	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	125	-1	combination_of_known_junctions	FALSE	canonical	1	10	junction_9	55.8299888439984	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTCTGGAAAGCCCAGT	NA	False	NA	NA	False	AATAAA	-12	NA	158197692	158269618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158269421
ES.37950.33	chrX	+	2833	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	136	-1702	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	31.6824969382923	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTAATCTTTTTTT	NA	False	NA	NA	False	AATAGA	-16	NA	158197703	158279877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030
ES.37950.34	chrX	+	3119	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	153	-24	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	47.5899256188551	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATACAGACATCTA	NA	False	NA	-17	True	NA	NA	NA	158197720	158281729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158280579
ES.37950.35	chrX	+	179	1	Intergenic	novelGene_31093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTAGTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	158209898	158210077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158209900_158210100
ES.37950.36	chrX	+	193	1	Intergenic	novelGene_31095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATTTTTATTAGGT	NA	False	NA	NA	False	NA	NA	NA	158219728	158219921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158219700_158219900
ES.37950.37	chrX	+	172	1	Intergenic	novelGene_31096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATCTTTAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	158238646	158238818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158238600_158238800
ES.37950.38	chrX	+	2687	1	Intergenic	novelGene_31097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAATCAAATCCCACTAA	NA	False	NA	NA	False	NA	NA	NA	158247720	158250407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158247700_158250400
ES.37950.39	chrX	+	177	1	Intergenic	novelGene_31098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9776	False	NA	NA	False	NA	NA	NA	158258549	158258726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158258500_158258700
ES.37950.5	chrX	+	3650	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-61	201	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_15	45.6783926551226	458	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATAGCTTGCTGTTGGTTT	NA	False	NA	NA	False	AATACA	-17	NA	158197506	158281954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279123_158280579
ES.37950.6	chrX	+	3286	13	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-60	2924	intron_retention	FALSE	canonical	1	49	junction_5	34.0892415417077	454	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTCAAAAGAAAGGGTAG	NA	False	NA	NA	False	NA	NA	NA	158197507	158276698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319
ES.37950.9	chrX	+	3600	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.3016007222749	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGCTGTGCCATTGA	NA	False	NA	1	True	AATAAA	-12	NA	158197556	158281747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252934_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ES.37951.1	chrX	-	3557	1	Intergenic	novelGene_31094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTAGCTGCAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	158219980	158216423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158216400_158220000
ES.37952.1	chrX	+	204	1	Intergenic	novelGene_31099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGGGTATCTGCATC	NA	False	NA	NA	False	NA	NA	NA	158287230	158287434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158287200_158287400
ES.37953.1	chrX	-	1361	1	Intergenic	novelGene_31100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTTCTGATGAAG	NA	False	NA	NA	False	NA	NA	NA	158291718	158290357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158290400_158291700
ES.37954.1	chrX	+	4228	9	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-7816	10087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.05085059737	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTGTGGTCATATCT	NA	False	NA	24	True	NA	NA	NA	158301867	158344972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158301924_158305157_158305484_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.10	chrX	+	4200	14	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.156289695422	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158309455	158376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158310109_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.100	chrX	+	3499	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-20	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	209.742817723937	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315694	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342957_158350073_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.101	chrX	+	3284	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	255.90377694664	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315695	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331239_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.102	chrX	+	3674	12	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-11	212	combination_of_known_junctions	FALSE	canonical	3	111	junction_9	153.898914983368	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAAGAGGTGCATCTT	NA	False	NA	NA	False	AATATA	-7	NA	158315703	158375602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.103	chrX	+	3988	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	229.974486547551	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315705	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.104	chrX	+	3234	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	231.180470027687	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315705	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.105	chrX	+	3289	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-6	-10	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	206.787670076984	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315708	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.106	chrX	+	3341	7	NIC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	-6	10083	combination_of_known_splicesites	FALSE	canonical	1	17	junction_2	217.882741145068	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTTTTGTGTGGTCAT	NA	False	NA	20	True	NA	NA	NA	158315708	158344968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.107	chrX	+	2487	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-6	19	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAATGCTGCAACTT	NA	False	NA	NA	False	GATAAA	-17	NA	158315708	158375217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.108	chrX	+	4024	12	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-6	-120	combination_of_known_junctions	FALSE	canonical	3	111	junction_9	153.898914983368	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTTTCTTTCTTC	NA	False	NA	-97	True	AATACA	-18	NA	158315708	158375957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.109	chrX	+	3012	10	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4	-16	combination_of_known_splicesites	FALSE	canonical	1	13	junction_4	187.119358488072	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315710	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.11	chrX	+	3150	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-224	-16	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	230.859300286832	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158309459	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.110	chrX	+	3197	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4	-16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	213.746161340042	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315710	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.111	chrX	+	2295	10	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4	-8412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	252.293675635027	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTTGAAGTTCAATTT	NA	False	NA	NA	False	AATATA	-13	NA	158315710	158349681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158333459_158333556_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423
ES.37954.113	chrX	+	2563	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-3	22293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	231.418586080442	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCATACAGTCTCTACAG	NA	False	NA	NA	False	NA	NA	NA	158315711	158398370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158398024
ES.37954.114	chrX	+	3210	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	204.69170529085	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGGCAGTTGGTGAG	NA	False	NA	12	True	AATAAA	-25	NA	158315711	158376066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350921_158351011_158357940_158358094_158375066
ES.37954.115	chrX	+	3278	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-3	19	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	183.348874873437	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAATGCTGCAACTT	NA	False	NA	NA	False	GATAAA	-17	NA	158315711	158375217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.116	chrX	+	3224	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-3	-120	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTTTCTTTCTTC	NA	False	NA	-97	True	AATACA	-18	NA	158315711	158375957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.118	chrX	+	3231	11	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-3	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	185.542690505447	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315711	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.12	chrX	+	5150	11	NIC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-67	-8	intron_retention	FALSE	canonical	3	25	junction_1	182.604737068894	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158309616	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
ES.37954.120	chrX	+	3814	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	1	30566	1	9939	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCGAGGATTTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	158315715	158344824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.121	chrX	+	3318	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	229.335187224232	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315715	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342957_158349433_158349539_158350914_158351011_158357940_158358109_158375066
ES.37954.122	chrX	+	4185	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	3	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	254.255125098892	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315717	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350796_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.123	chrX	+	10035	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	4	-16	intron_retention	FALSE	canonical	3	10	junction_8	226.4469726116	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315718	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158349539_158350092_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.124	chrX	+	2846	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	4	225	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	151.634892079191	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCTCCATCGGGTCG	NA	False	NA	NA	False	AATATA	-20	NA	158315718	158375615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.125	chrX	+	1238	4	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	4	38727	4	1778	5prime_fragment	FALSE	canonical	3	487	junction_1	64.3238334954903	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAACTCTGTTTCCTA	NA	False	NA	-58	True	NA	NA	NA	158315718	158336663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239
ES.37954.126	chrX	+	2115	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	4	32262	4	8243	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAGGTCTTTTAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	158315718	158343128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.127	chrX	+	3880	7	NIC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	4	10085	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	227.667459735075	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTGTGTGGTCATAT	NA	False	NA	22	True	NA	NA	NA	158315718	158344970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.129	chrX	+	3513	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	4	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	245.926361230204	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315718	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350195_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.13	chrX	+	4651	13	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-61	-1	intron_retention	FALSE	canonical	2	12	junction_9	240.653796978149	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158309622	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.131	chrX	+	3184	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	57	125	6	-125	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTTTGTTTTCTT	NA	False	NA	NA	False	AATACA	-13	NA	158315720	158375952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.134	chrX	+	3944	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	6	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	228.885281794663	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCTGTTACCTGGCAG	NA	False	NA	4	True	AATAAA	-17	NA	158315720	158376058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350143_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.135	chrX	+	2644	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTGAAAGCTTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158315723	158375389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.136	chrX	+	3269	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	177.145548785583	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315724	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334772_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.137	chrX	+	3607	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	11	-16	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	244.70731218959	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315725	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350092_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.138	chrX	+	3296	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	12	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	183.879541957264	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315726	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351018_158357940_158358094_158375066
ES.37954.14	chrX	+	3770	12	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-60	-2	intron_retention	FALSE	canonical	3	25	junction_1	202.540354105848	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	21	True	AATAAA	-34	NA	158309623	158376075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.140	chrX	+	3271	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	23	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.364308766929	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTTACCTGGCAGT	NA	False	NA	5	True	AATAAA	-18	NA	158315737	158376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338651_158340445_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.141	chrX	+	3967	11	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	47	887	combination_of_known_junctions	FALSE	canonical	3	111	junction_9	156.272198423136	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTATAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	158315761	158358980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940
ES.37954.142	chrX	+	4084	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	203.946071303176	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158315764	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158337685_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.143	chrX	+	6471	5	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	21020	26597	11984	-9300	internal_fragment	FALSE	canonical	3	421	junction_2	91.5887547682574	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTACAAAATACCTGGGAAG	NA	False	NA	NA	False	NA	NA	NA	158336734	158348793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.144	chrX	+	1925	8	NIC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	-11317	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_5	167.614231532543	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTGAAAGCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	158338527	158375390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.145	chrX	+	1488	7	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-8516	-8	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	213.540524387189	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158341328	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.146	chrX	+	7769	6	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-6722	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	199.402106307832	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAATGCTGCAACTT	NA	False	NA	NA	False	GATAAA	-17	NA	158343122	158375217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158350362_158350914_158351011_158357940_158358094_158370739_158370844_158374327_158374354_158375066
ES.37954.147	chrX	+	8889	4	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-6533	0	intron_retention	FALSE	canonical	3	151	junction_2	178.887922702705	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158343311	158376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.148	chrX	+	5821	5	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4851	-10	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_3	156.467248969233	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158344993	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.149	chrX	+	4932	6	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-3769	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.369648788729	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158346075	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158349452_158350104_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.15	chrX	+	3663	15	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	240.292519438203	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158309629	158376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309756_158310171_158310201_158315460_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.150	chrX	+	4927	3	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-3286	6937	intron_retention	FALSE	canonical	1	5	junction_2	268	665	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATGATCG	NA	False	NA	NA	False	NA	NA	NA	158346558	158365030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158351011_158357940_158358094_158364708
ES.37954.151	chrX	+	3846	4	ISM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	31273	16	-2908	-16	3prime_fragment	FALSE	canonical	3	339	junction_1	88.1400400877301	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158346936	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.152	chrX	+	3757	4	FSM	ENSMUSG00000044150.13	ENSMUST00000149054.8	898	4	-2667	-192	-2667	0	multi-exon	FALSE	canonical	3	111	junction_1	176.99905837791	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTGAAAGCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	158347177	158375390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.153	chrX	+	3736	3	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	31866	171	-2264	21	3prime_fragment	FALSE	canonical	3	374	junction_2	83.5	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATGCTGCAACTTTT	NA	False	NA	NA	False	GATAAA	-19	NA	158347580	158375219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158351011_158357940_158358094_158375066
ES.37954.154	chrX	+	3527	4	FSM	ENSMUSG00000044150.13	ENSMUST00000149054.8	898	4	-2219	-410	-2219	218	multi-exon	FALSE	canonical	3	111	junction_1	176.99905837791	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGCATCTTCTCCAT	NA	False	NA	NA	False	AATATA	-13	NA	158347625	158375608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.155	chrX	+	2608	4	FSM	ENSMUSG00000044150.13	ENSMUST00000149054.8	898	4	-956	-754	-956	-125	multi-exon	FALSE	canonical	3	111	junction_1	176.99905837791	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTTTGTTTTCTT	NA	False	NA	NA	False	AATACA	-13	NA	158348888	158375952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.156	chrX	+	1199	1	Intergenic	novelGene_31104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	158363775	158364974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158363800_158365000
ES.37954.157	chrX	+	6064	3	Genic_Genomic	ENSMUSG00000044150.13	novel	3366	12	NA	NA	17175	-120	multi-exon	FALSE	non_canonical	0	0	junction_1	0	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTTTCTTTCTTC	NA	False	NA	-97	True	AATACA	-18	NA	158367708	158375957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_158369951_158370418_158370639_158372355
ES.37954.158	chrX	+	4350	3	Genic_Genomic	ENSMUSG00000044150.13	novel	3366	12	NA	NA	18981	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158369514	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_158369917_158370397_158370624_158372354
ES.37954.159	chrX	+	4813	1	FSM	ENSMUSG00000083906.2	ENSMUST00000119345.2	563	1	-213	-4037	-213	4037	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTTACCTGGCAGTT	NA	False	NA	6	True	AATAAA	-19	NA	158371247	158376060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158371200_158376100
ES.37954.16	chrX	+	4071	8	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-48	10072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	218.375449020017	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTGTGCAAGTTTT	NA	False	NA	9	True	NA	NA	NA	158309635	158344957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309876_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.160	chrX	+	5587	1	Genic_Genomic	ENSMUSG00000044150.13	novel	NA	NA	NA	NA	22866	2909	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAGAACTTTACTTTTA	NA	False	NA	NA	False	NA	NA	NA	158373399	158378986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_158373400_158379000
ES.37954.161	chrX	+	1890	2	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	22933	-8	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_1	0	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158373466	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158374354_158375066
ES.37954.17	chrX	+	3406	10	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-46	-14	intron_retention	FALSE	canonical	0	0	junction_8	271.427502086448	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158309637	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158374327_158374354_158375066
ES.37954.18	chrX	+	4403	8	NIC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-44	10083	intron_retention	FALSE	canonical	3	25	junction_1	210.150771920485	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTTTTGTGTGGTCAT	NA	False	NA	20	True	NA	NA	NA	158309639	158344968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.19	chrX	+	3879	13	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-44	-7	intron_retention	FALSE	canonical	0	0	junction_2	219.250364246498	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158309639	158376070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.2	chrX	+	3229	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-4232	-1	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	184.36000534348	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158305451	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158305484_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.20	chrX	+	11052	11	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	-44	-1	intron_retention	FALSE	canonical	3	25	junction_1	234.231167866277	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158309639	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.21	chrX	+	3657	15	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-42	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	254.199142566675	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGTGAGAGCATTCT	NA	False	NA	20	True	AATAAA	-33	NA	158309641	158376074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309756_158310015_158310201_158315456_158315584_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.22	chrX	+	3293	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-33	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.375054486166	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158309650	158376070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309756_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.23	chrX	+	4647	10	NNC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	-31	10087	intron_retention	FALSE	canonical	0	0	junction_2	248.022300869085	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTGTGGTCATATCT	NA	False	NA	24	True	NA	NA	NA	158309652	158344972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.24	chrX	+	3184	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-31	-1	intron_retention	FALSE	canonical	0	0	junction_1	177.223728659567	849	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTGAAAGCTTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158309652	158375389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.25	chrX	+	3874	14	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-20	-14	intron_retention	FALSE	canonical	0	0	junction_2	232.518600134019	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158309663	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.26	chrX	+	3858	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_1	177.223728659567	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158309665	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.27	chrX	+	3904	15	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-13	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	264.136453990226	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158309670	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158324697_158324800_158324901_158324944_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.29	chrX	+	3753	13	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	25	junction_1	207.410154578367	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158309670	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.3	chrX	+	196	1	Intergenic	novelGene_31101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCATGATCCAGTGAAATA	NA	False	NA	NA	False	NA	NA	NA	158306179	158306375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158306200_158306400
ES.37954.30	chrX	+	4788	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_2	227.425545395026	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	21	True	AATAAA	-34	NA	158309684	158376075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.31	chrX	+	3576	12	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	2	-10	intron_retention	FALSE	canonical	0	0	junction_10	234.55972472445	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158309685	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158374327_158374354_158375066
ES.37954.32	chrX	+	4172	9	NIC	ENSMUSG00000044150.13	novel	898	4	NA	NA	2	-9	intron_retention	FALSE	canonical	0	0	junction_4	240.424104448784	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158309685	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.33	chrX	+	2850	12	NIC	ENSMUSG00000044150.13	novel	578	4	NA	NA	2	16	intron_retention	FALSE	canonical	3	25	junction_1	179.30540915451	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAGTGGAATGCTGCAA	NA	False	NA	NA	False	GATAAA	-14	NA	158309685	158375214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.34	chrX	+	4548	13	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	2	-14	intron_retention	FALSE	canonical	3	25	junction_1	224.676743097475	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158309685	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.35	chrX	+	3644	13	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	3	-7	intron_retention	FALSE	canonical	3	25	junction_1	228.030501736549	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158309686	158376070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.36	chrX	+	3900	8	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	5	10074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	218.375449020017	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	NA	False	NA	11	True	NA	NA	NA	158309688	158344959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309756_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.38	chrX	+	4501	12	NNC	ENSMUSG00000044150.13	novel	898	4	NA	NA	15	-19	intron_retention	FALSE	canonical	3	25	junction_1	223.394658740354	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCTGTTACCTGGCAG	NA	False	NA	4	True	AATAAA	-17	NA	158309698	158376058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.39	chrX	+	4335	9	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	142	10074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	262.634608343988	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	NA	False	NA	11	True	NA	NA	NA	158309825	158344959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.4	chrX	+	3310	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-286	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	184.36000534348	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158309397	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.40	chrX	+	3073	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	156	18	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	176.112397033511	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGGAATGCTGCAACT	NA	False	NA	NA	False	GATAAA	-16	NA	158309839	158375216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.41	chrX	+	3930	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	158	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	176.112397033511	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	21	True	AATAAA	-34	NA	158309841	158376075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.42	chrX	+	3423	11	NIC	ENSMUSG00000044150.13	novel	578	4	NA	NA	159	-18	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	226.307666684096	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTTACCTGGCAGT	NA	False	NA	5	True	AATAAA	-18	NA	158309842	158376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158350914_158351011_158357940_158358094_158375066
ES.37954.43	chrX	+	3408	12	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	211	-9	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	209.62512782316	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158309894	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.44	chrX	+	3313	13	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	303	-125	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	207.410154578367	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTCTTTGTTTTCTT	NA	False	NA	NA	False	AATACA	-13	NA	158309986	158375952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.45	chrX	+	3498	15	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	495	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	225.278750232068	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158310178	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158310201_158315456_158315584_158315705_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.46	chrX	+	3079	1	Intergenic	novelGene_31102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGTGAATGTAAAGTCC	NA	False	NA	NA	False	NA	NA	NA	158310671	158313750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158310700_158313800
ES.37954.47	chrX	+	3910	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	-562	18	-562	-18	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTTACCTGGCAGT	NA	False	NA	5	True	AATAAA	-18	NA	158315101	158376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.48	chrX	+	3939	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-547	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315116	158376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.49	chrX	+	3643	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-539	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.055318957279	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315124	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315584_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.5	chrX	+	3334	12	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-282	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	228.581938217653	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158309401	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358128_158375066
ES.37954.50	chrX	+	10739	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-57	-7	intron_retention	FALSE	canonical	3	111	junction_8	200.539190539278	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315606	158376070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.51	chrX	+	3741	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-47	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	226.847400372046	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315616	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341563_158342833_158342950_158349423_158349452_158350104_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.53	chrX	+	4058	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-95	30418	-44	10087	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTGTGGTCATATCT	NA	False	NA	24	True	NA	NA	NA	158315619	158344972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.55	chrX	+	4759	11	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	147	junction_5	150.763689262368	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTTGGTGAGAGCATTC	NA	False	NA	19	True	AATAAA	-32	NA	158315639	158376073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
ES.37954.56	chrX	+	2445	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-24	21	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	844	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATGCTGCAACTTTT	NA	False	NA	NA	False	GATAAA	-19	NA	158315639	158375219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.57	chrX	+	3295	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-24	-8	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315639	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
ES.37954.59	chrX	+	4770	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	147	junction_5	195.307259516472	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158315657	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.6	chrX	+	2677	11	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-279	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	233.567998664201	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGAGAGCATTCTTT	NA	False	NA	22	True	AATAAA	-35	NA	158309404	158376076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331240_158331312_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.60	chrX	+	4604	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-4	-16	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_9	198.049956132202	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315659	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.61	chrX	+	3704	15	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	242.554264915238	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315664	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350092_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.63	chrX	+	4828	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	235.083495805214	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315666	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158348218_158349539_158350092_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.64	chrX	+	3086	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	3	277	3	-277	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTTGAACATTGTACT	NA	False	NA	NA	False	TTTAAA	-28	NA	158315666	158375800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.65	chrX	+	4252	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	5	71	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	183.348874873437	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGTATATTTTCTCCA	NA	False	NA	94	True	NA	NA	NA	158315668	158376148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.66	chrX	+	4254	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	5	-9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	227.803403250576	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315668	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.67	chrX	+	4875	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	8	-10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	258.263729250071	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315671	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158348218_158349539_158350092_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
ES.37954.69	chrX	+	2677	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	8	22286	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	240.347477045677	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTAAGCATACAGTC	NA	False	NA	NA	False	NA	NA	NA	158315671	158398363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158391524_158391586_158398007
ES.37954.7	chrX	+	3935	8	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	-267	10078	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	250.982558951731	720	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAAGTTTTTGTGTG	NA	False	NA	15	True	NA	NA	NA	158309416	158344963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833
ES.37954.71	chrX	+	3931	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	8	6949	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	237.703058040179	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCGTGTGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	158315671	158365042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350792_158350914_158351011_158357940_158358094_158364708
ES.37954.72	chrX	+	3252	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	9	-16	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	211.746534898029	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315672	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.73	chrX	+	2986	11	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	10	-18	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_4	232.327807203529	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTTACCTGGCAGT	NA	False	NA	5	True	AATAAA	-18	NA	158315673	158376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.75	chrX	+	3945	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	204.69170529085	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315677	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350143_158350914_158351011_158357940_158358094_158375066
ES.37954.76	chrX	+	4184	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-14	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	209.935109021812	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTACCTGGCAGTTGGT	NA	False	NA	9	True	AATAAA	-22	NA	158315677	158376063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.78	chrX	+	4224	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	216.579517729632	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315677	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350796_158350914_158351011_158357940_158358094_158375066
ES.37954.80	chrX	+	11201	10	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	15	0	intron_retention	FALSE	canonical	3	374	junction_9	94.8805616955039	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315678	158376077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158351011_158357940_158358094_158375066
ES.37954.81	chrX	+	3357	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	15	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	182.432734122303	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315678	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358109_158375066
ES.37954.82	chrX	+	3606	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	17	-9	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	216.894559636705	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315680	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350092_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.83	chrX	+	4531	10	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	17	-18	intron_retention	FALSE	canonical	0	0	junction_4	192.083572346602	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTTACCTGGCAGT	NA	False	NA	5	True	AATAAA	-18	NA	158315680	158376059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
ES.37954.84	chrX	+	4049	11	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	18	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	212.742684950623	846	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTGAAAGCTTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158315681	158375389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358110_158375066
ES.37954.85	chrX	+	3222	11	NNC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	204.909248205151	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315681	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158350914_158351011_158357940_158358094_158375066
ES.37954.86	chrX	+	2233	9	ISM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	20	26392	20	-8408	5prime_fragment	FALSE	canonical	3	412	junction_8	92.8372231381357	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAGTTCAATTTATTA	NA	False	NA	NA	False	AATATA	-17	NA	158315683	158349685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423
ES.37954.87	chrX	+	3574	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-10	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	200.019751090852	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315683	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336306_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.88	chrX	+	3328	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	229.435221162879	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGCAGTTGGTGAGA	NA	False	NA	13	True	AATAAA	-26	NA	158315683	158376067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350738_158350792_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.89	chrX	+	3165	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-120	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	196.729703880448	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTGTTTTCTTTCTTC	NA	False	NA	-97	True	AATACA	-18	NA	158315683	158375957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.9	chrX	+	3215	13	NNC	ENSMUSG00000044150.13	novel	630	2	NA	NA	-252	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	231.180470027687	859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158309431	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158309518_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.90	chrX	+	3449	10	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	216.210688284356	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCTGTTACCTGGCAG	NA	False	NA	4	True	AATAAA	-17	NA	158315683	158376058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.91	chrX	+	3344	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	211.054495332367	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGCAGTTGGTGAGAG	NA	False	NA	14	True	AATAAA	-27	NA	158315683	158376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.92	chrX	+	10636	11	NIC	ENSMUSG00000044150.13	novel	2513	11	NA	NA	20	-7	intron_retention	FALSE	canonical	3	111	junction_8	158.998616346181	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCAGTTGGTGAGAGCA	NA	False	NA	16	True	AATAAA	-29	NA	158315683	158376070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.93	chrX	+	3382	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	249.625539002367	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGTGAGAGCATTCTT	NA	False	NA	21	True	AATAAA	-34	NA	158315683	158376075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315813_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350738_158350796_158350914_158351011_158357940_158358094_158375066
ES.37954.94	chrX	+	3466	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	22	-122	22	122	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACTCTTCCTTACC	NA	False	NA	NA	False	NA	NA	NA	158315685	158376199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ES.37954.96	chrX	+	4432	8	ISM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-26	29975	25	10530	5prime_fragment	FALSE	canonical	3	421	junction_5	81.1237402027902	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGATGTAGAACTGTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	158315688	158345415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833
ES.37954.97	chrX	+	4942	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	25	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	202.942934616467	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTACCTGGCAGTTG	NA	False	NA	7	True	AATAAA	-20	NA	158315688	158376061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158337685_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
ES.37954.98	chrX	+	3575	14	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-22	23	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	227.803403250576	847	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGGTGTCAGAATTA	NA	False	NA	NA	False	ATTAAA	-40	NA	158315692	158375413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37954.99	chrX	+	5083	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	-22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.340358419533	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCAGTTGGTGAGAGC	NA	False	NA	15	True	AATAAA	-28	NA	158315692	158376069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158348518_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
ES.37955.1	chrX	-	175	1	Intergenic	novelGene_31103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	158319019	158318844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158318800_158319000
ES.37956.1	chrX	-	3673	1	FSM	ENSMUSG00000082693.4	ENSMUST00000120855.2	276	1	-2009	-1388	-2009	1388	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTCAAGTAACATATAAAGG	NA	False	NA	NA	False	NA	NA	NA	158370063	158366390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_158366400_158370100
ES.37957.1	chrX	+	3317	19	NNC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-183	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.91607978309962	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGGGGAATTGGATTAT	NA	False	NA	20	True	AATAAA	-25	NA	158410084	158757167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158410121_158410405_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.2	chrX	+	3484	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	-62	3895	-62	7	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAATTGGATTATTTC	NA	False	NA	23	True	AATAAA	-28	NA	158410205	158757170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.3	chrX	+	4034	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	-29	3312	-29	590	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTCTCCATCCCCATG	NA	False	NA	NA	False	AATAAA	-17	NA	158410238	158757753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.4	chrX	+	3310	17	NIC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-18	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	5.29150262212918	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGAATTGGATTATTT	NA	False	NA	22	True	AATAAA	-27	NA	158410249	158757169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158749209_158749479_158754857_158754922_158756120
ES.37957.5	chrX	+	3372	18	NNC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	-15	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	6.07849462332683	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGGGGAATTGGATTAT	NA	False	NA	20	True	AATAAA	-25	NA	158410252	158757167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726249_158741240_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.6	chrX	+	5175	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	-9	2151	-9	1	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTGTAAAGACATT	NA	False	NA	NA	False	ATTAAA	-14	NA	158410258	158758914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.7	chrX	+	3360	18	NNC	ENSMUSG00000040990.18	novel	7317	18	NA	NA	20	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	6.07849462332683	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAATAAAAAATAAA	NA	False	NA	-13	True	ATTAAA	-3	NA	158410287	158757134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741214_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.8	chrX	+	3080	18	NNC	ENSMUSG00000040990.18	novel	1986	6	NA	NA	-28303	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.05968012220043	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAATAAAAAATAAA	NA	False	NA	-13	True	ATTAAA	-3	NA	158452008	158757134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158452123_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ES.37957.9	chrX	+	179	1	Intergenic	novelGene_31108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	158728136	158728315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_158728100_158728300
ES.37958.1	chrX	-	175	1	Intergenic	novelGene_31105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTATAGAAGT	NA	False	NA	NA	False	NA	NA	NA	158415946	158415771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158415800_158415900
ES.37959.1	chrX	-	176	1	Intergenic	novelGene_31106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAAGTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	158477694	158477518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158477500_158477700
ES.3796.1	chr10	+	146	1	Intergenic	novelGene_2885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-39	NA	117056814	117056960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117056800_117057000
ES.37960.1	chrX	-	164	1	Intergenic	novelGene_31107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGTATGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	158634395	158634231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158634200_158634400
ES.37961.1	chrX	+	4583	29	FSM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	-238	3	-238	-3	multi-exon	FALSE	canonical	3	16	junction_1	11.3624762858691	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAAGTTCCCTTATTT	NA	False	NA	10	True	ATTAAA	-18	NA	158771190	158906344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.10	chrX	+	4273	26	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-182	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.1921032118664	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACTGAAGTTCCCTTA	NA	False	NA	7	True	ATTAAA	-15	NA	158771246	158906341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785051_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.11	chrX	+	6710	27	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-176	-6	intron_retention	FALSE	canonical	0	0	junction_7	15.0096615827407	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACTGAAGTTCCCTTA	NA	False	NA	7	True	ATTAAA	-15	NA	158771252	158906341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158853622_158853744_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.13	chrX	+	4242	29	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	51	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	13.1308174668198	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGTGACTGAAGTTCC	NA	False	NA	3	True	ATTAAA	-11	NA	158771479	158906337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898925_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.14	chrX	+	5779	28	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	198	-5	intron_retention	FALSE	canonical	0	0	junction_10	13.3192312255234	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTGAAGTTCCCTTAT	NA	False	NA	8	True	ATTAAA	-16	NA	158771626	158906342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863006_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.15	chrX	+	4596	19	NIC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	87753	-7	intron_retention	FALSE	canonical	3	28	junction_12	11.8582158839607	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGACTGAAGTTCCCTT	NA	False	NA	6	True	ATTAAA	-14	NA	158859181	158906340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158899047_158899514_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.16	chrX	+	2684	7	NIC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	127073	-5	intron_retention	FALSE	canonical	0	0	junction_3	24.8713355759865	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACTGAAGTTCCCTTAT	NA	False	NA	8	True	ATTAAA	-16	NA	158898501	158906342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158899047_158899514_158900837_158901536_158901643_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.2	chrX	+	4562	28	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-234	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.0469238605206	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGACTGAAGTTCCCTTA	NA	False	NA	7	True	ATTAAA	-15	NA	158771194	158906341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785051_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.3	chrX	+	2558	1	Genic_Genomic	ENSMUSG00000031303.9	novel	NA	NA	NA	NA	-234	-132595	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGAAAACTGTTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	158771194	158773752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_158771200_158773800
ES.37961.5	chrX	+	5209	28	NIC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-226	-7	intron_retention	FALSE	canonical	3	16	junction_1	11.5608962017507	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGACTGAAGTTCCCTT	NA	False	NA	6	True	ATTAAA	-14	NA	158771202	158906340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.6	chrX	+	8336	25	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-226	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	14.0830251445569	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGTTCCCTTATTTTG	NA	False	NA	12	True	ATTAAA	-20	NA	158771202	158906346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158874711_158877291_158877420_158880969_158881104_158881316_158881423_158895401_158895560_158898054_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.7	chrX	+	5173	28	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-226	-3	intron_retention	FALSE	canonical	0	0	junction_7	13.3315842474161	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAAGTTCCCTTATTT	NA	False	NA	10	True	ATTAAA	-18	NA	158771202	158906344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158855965_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.8	chrX	+	4515	29	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-215	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	13.0013245008157	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGACTGAAGTTCCCTT	NA	False	NA	6	True	ATTAAA	-14	NA	158771213	158906340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858631_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ES.37961.9	chrX	+	2951	19	NNC	ENSMUSG00000031303.9	novel	4348	29	NA	NA	-203	-24203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	9.68134262701865	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAGACAAATCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	158771225	158882144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158881839
ES.37962.1	chrX	+	7819	1	Antisense	novelGene_ENSMUSG00000031299.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGGAGGGCAGGCAG	5203	False	NA	NA	False	NA	NA	NA	158906876	158914695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_158906900_158914700
ES.37963.1	chrX	-	239	1	Intergenic	novelGene_31109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTAGTCATATTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	158865151	158864912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158864900_158865200
ES.37964.1	chrX	-	3762	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	1	974	intron_retention	FALSE	canonical	0	0	junction_5	435.563129752737	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGTTTCAAACTGTAT	NA	False	NA	NA	False	NA	NA	NA	158921351	158904230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910719_158911456_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.11	chrX	-	2898	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	206	-9	intron_retention	FALSE	canonical	0	0	junction_10	434.138468694033	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTTACAGTTCTTGAG	NA	False	NA	-10	True	ATTAAA	-15	NA	158921099	158905213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158920882
ES.37964.12	chrX	-	5247	9	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-4	-9	intron_retention	FALSE	canonical	3	1261	junction_4	105.632544109285	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTTACAGTTCTTGAG	NA	False	NA	-10	True	ATTAAA	-15	NA	158921413	158905213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158915239_158916168_158916229_158921251
ES.37964.14	chrX	-	2844	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	365	-10	intron_retention	FALSE	canonical	0	0	junction_10	434.138468694033	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158920940	158905214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158920776
ES.37964.15	chrX	-	2821	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	15	-10	intron_retention	FALSE	canonical	0	0	junction_5	435.563129752737	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158921394	158905214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910719_158911456_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.16	chrX	-	4182	5	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	19	-10	intron_retention	FALSE	canonical	3	1235	junction_1	120.457461371224	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTTACAGTTCTTGA	NA	False	NA	-11	True	ATTAAA	-14	NA	158911942	158905214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158909258_158910286_158910359_158910568_158910725_158911460
ES.37964.17	chrX	-	3564	10	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	9	-11	intron_retention	FALSE	canonical	3	1235	junction_1	104.488997589622	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158921400	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.18	chrX	-	2807	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	4571	-11	intron_retention	FALSE	canonical	0	0	junction_10	434.138468694033	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158916734	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158916606
ES.37964.19	chrX	-	3064	12	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	192	-11	intron_retention	FALSE	canonical	0	0	junction_10	550.176740948753	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158921113	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158920094_158920249_158920882
ES.37964.2	chrX	-	3805	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	17	-974	17	974	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGTTTCAAACTGTAT	NA	False	NA	NA	False	NA	NA	NA	158921392	158904230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.22	chrX	-	3680	10	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	9	-11	intron_retention	FALSE	canonical	3	1235	junction_1	107.989139828909	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158921400	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.26	chrX	-	4188	12	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	788	-11	intron_retention	FALSE	canonical	0	0	junction_10	550.176740948753	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158920517	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158917752_158917788_158919043
ES.37964.28	chrX	-	2549	9	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	3	-11	intron_retention	FALSE	canonical	0	0	junction_3	471.968219269052	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTTACAGTTCTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	158921349	158905215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.29	chrX	-	3484	4	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	1	-13	intron_retention	FALSE	non_canonical	0	0	junction_2	701.22226623708	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTTTTACAGTTCT	NA	False	NA	-14	True	ATTAAA	-11	NA	158921351	158905217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158907624_158909189_158909446_158915506_158916229_158921251
ES.37964.3	chrX	-	2907	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	-60	1	-60	-1	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTCTTGAGTTCCCTTT	NA	False	NA	-2	True	ATTAAA	-23	NA	158921469	158905205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.30	chrX	-	4723	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	216	-13	intron_retention	FALSE	canonical	0	0	junction_10	434.138468694033	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTTTTACAGTTCT	NA	False	NA	-14	True	ATTAAA	-11	NA	158921089	158905217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158919043
ES.37964.31	chrX	-	2112	5	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-23	-13	intron_retention	FALSE	canonical	0	0	junction_2	599.461581337787	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTTTTACAGTTCT	NA	False	NA	-14	True	ATTAAA	-11	NA	158921375	158905217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158915145_158915239_158916168_158916229_158921251
ES.37964.32	chrX	-	2552	12	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-14	-13	intron_retention	FALSE	canonical	2	45	junction_1	402.795766800082	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTACTTTTACAGTTCT	NA	False	NA	-14	True	ATTAAA	-11	NA	158921423	158905217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906527_158906823_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.33	chrX	-	3940	7	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-3142	-14	intron_retention	FALSE	canonical	3	1235	junction_1	125.033328890074	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTACTTTTACAGTTC	NA	False	NA	-15	True	ATTAAA	-10	NA	158915103	158905218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158913232_158915064
ES.37964.36	chrX	-	1483	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	-14	1379	-14	-1379	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGATTTGAGATGGGTAT	NA	False	NA	43	True	NA	NA	NA	158921423	158906583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.37	chrX	-	1556	6	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-460	-1433	intron_retention	FALSE	canonical	3	1235	junction_1	131.663814315096	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTATTTGGTGTA	NA	False	NA	-11	True	AGTAAA	-17	NA	158912421	158906637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158911554_158912405
ES.37964.5	chrX	-	2805	11	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	28	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	578.867247302868	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACAGTTCTTGAGTTCC	NA	False	NA	-6	True	ATTAAA	-19	NA	158921381	158905209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910719_158911456_158911546_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.6	chrX	-	2687	12	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-6	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	415.306080494697	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACAGTTCTTGAGTTCC	NA	False	NA	-6	True	ATTAAA	-19	NA	158921358	158905209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_158906120_158906224_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ES.37964.7	chrX	-	4640	10	NIC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	-23	-7	intron_retention	FALSE	canonical	3	1235	junction_1	114.477557237701	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTACAGTTCTTGAGTT	NA	False	NA	-8	True	ATTAAA	-17	NA	158921375	158905211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158915239_158916168_158916229_158921251
ES.37965.1	chrX	-	202	1	Intergenic	novelGene_31110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTCGGGAG	NA	False	NA	NA	False	NA	NA	NA	158925157	158924955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158925000_158925200
ES.37966.1	chrX	-	175	1	Intergenic	novelGene_31111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAATAGATTAGG	NA	False	NA	NA	False	NA	NA	NA	158977124	158976949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_158976900_158977100
ES.37967.1	chrX	-	170	1	Intergenic	novelGene_31112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAATCAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	159056546	159056376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159056400_159056500
ES.37968.1	chrX	+	4748	27	FSM	ENSMUSG00000031298.16	ENSMUST00000112405.9	4634	27	-116	2	-81	-2	multi-exon	TRUE	canonical	0	0	junction_4	3.29245147062041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTTAAGTTTGGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	159173604	159281064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159244338_159244378_159246323_159246366_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.2	chrX	+	4664	25	NIC	ENSMUSG00000031298.16	novel	4601	26	NA	NA	-73	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	2.94126531728552	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCCTTTAAGTTTGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	159173612	159281063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159173746_159213345_159213391_159221190_159221310_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.3	chrX	+	4664	25	NNC	ENSMUSG00000031298.16	novel	4601	26	NA	NA	-45	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	3.28480297058371	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTGGTTTGCATTC	NA	False	NA	NA	False	AATAAA	-22	NA	159173640	159281070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159173746_159213345_159213391_159221190_159221310_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266208_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.4	chrX	+	4657	26	NIC	ENSMUSG00000031298.16	novel	4641	27	NA	NA	-26	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.04630924234556	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTGGTTTGCATTC	NA	False	NA	NA	False	AATAAA	-22	NA	159173659	159281070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.5	chrX	+	4611	28	FSM	ENSMUSG00000031298.16	ENSMUST00000112400.8	4682	28	-55	126	-20	-126	multi-exon	FALSE	canonical	0	0	junction_5	3.36201650901043	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTGTTTCTGTGTGTG	NA	False	NA	NA	False	AATAAA	-29	NA	159173665	159280940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159241830_159241879_159244338_159244378_159246323_159246366_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.6	chrX	+	4725	28	FSM	ENSMUSG00000031298.16	ENSMUST00000112400.8	4682	28	-47	4	-12	-4	multi-exon	FALSE	canonical	0	0	junction_5	3.36201650901043	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTTTAAGTTTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	159173673	159281062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159241830_159241879_159244338_159244378_159246323_159246366_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.7	chrX	+	4676	27	FSM	ENSMUSG00000031298.16	ENSMUST00000112402.8	4641	27	-28	-7	6	7	multi-exon	FALSE	canonical	0	0	junction_5	3.1500915737605	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTTTGCATTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	159173691	159281073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159241830_159241879_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ES.37968.8	chrX	+	160	1	Intergenic	novelGene_31114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	6263	False	NA	NA	False	NA	NA	NA	159262379	159262539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159262400_159262500
ES.37969.1	chrX	-	177	1	Intergenic	novelGene_31113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAGAAAATATCAT	NA	False	NA	NA	False	NA	NA	NA	159195175	159194998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159195000_159195200
ES.3797.1	chr10	+	515	4	Intergenic	novelGene_2886	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6.0184900284226	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGCATAGATCAAA	NA	False	NA	NA	False	NA	NA	NA	117060137	117063886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117060187_117062495_117062653_117063449_117063496_117063623
ES.3797.2	chr10	+	3439	1	FSM	ENSMUSG00000112462.2	ENSMUST00000218027.2	364	1	-46	-3029	-46	3029	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATGCATAGATCAAA	NA	False	NA	NA	False	NA	NA	NA	117060447	117063886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117060400_117063900
ES.3797.3	chr10	+	7677	1	Antisense	novelGene_ENSMUSG00000020177.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCGTTTCATATTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	117061055	117068732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_117061100_117068700
ES.37970.1	chrX	+	5987	32	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-25	6	intron_retention	FALSE	canonical	3	9	junction_1	19.6770491768459	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAGACTCATTGGGAA	NA	False	NA	13	True	CATAAA	-24	NA	159285136	159374143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.10	chrX	+	7304	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-4	3326	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	19.0057262648391	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	159285157	159377463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.11	chrX	+	3951	34	FSM	ENSMUSG00000031295.14	ENSMUST00000112377.8	3947	34	-4	0	-4	0	multi-exon	FALSE	canonical	3	9	junction_1	19.1295904422098	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285157	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.12	chrX	+	4136	34	NIC	ENSMUSG00000031295.14	novel	4341	33	NA	NA	2	-11	combination_of_known_junctions	FALSE	canonical	2	5	junction_33	22.4706726529622	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATGGTATAAGCCTC	NA	False	NA	NA	False	AATAAA	-11	NA	159285163	159381863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159381463
ES.37970.13	chrX	+	4083	36	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.6497016044987	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTGTCATTTGTAGACT	NA	False	NA	4	True	CATAAA	-15	NA	159285164	159374134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311664_159311747_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159343724_159343789_159345718_159345889_159347179_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.14	chrX	+	5776	31	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_13	26.0728892828462	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285167	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342738_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.15	chrX	+	3926	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	23.9717847613911	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285167	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315983_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.16	chrX	+	3264	18	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	1	-1327	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	17.8098374899572	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATAGGCCTATGATGGA	NA	False	NA	NA	False	AAGAAA	-2	NA	159285168	159344418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095
ES.37970.17	chrX	+	6598	31	NIC	ENSMUSG00000031295.14	novel	4341	33	NA	NA	3	-11	intron_retention	FALSE	canonical	2	5	junction_30	19.3861347932542	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATGGTATAAGCCTC	NA	False	NA	NA	False	AATAAA	-11	NA	159285170	159381863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159381463
ES.37970.18	chrX	+	3777	33	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	28.590163709526	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285170	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365989_159367459_159367514_159369774_159369951_159371960_159372015_159373163_159373365_159373934
ES.37970.19	chrX	+	10371	29	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_1	20.2342153143569	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285175	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159342872_159343095_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.2	chrX	+	3982	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	19.0057262648391	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285153	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.20	chrX	+	7043	31	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	8	0	intron_retention	FALSE	canonical	2	3	junction_28	24.7570640872908	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285175	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369951_159371960_159372015_159373163_159373365_159373934
ES.37970.22	chrX	+	6036	33	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	34	-2	intron_retention	FALSE	canonical	1	2	junction_17	30.9050808676745	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	5	True	CATAAA	-16	NA	159285201	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345029_159345153_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369951_159371960_159372015_159373163_159373365_159373934
ES.37970.23	chrX	+	4317	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	-184	0	78	0	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285245	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.24	chrX	+	4287	34	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	24.5777938849232	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285398	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345029_159345153_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.25	chrX	+	7233	30	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	-9	-7	intron_retention	FALSE	canonical	1	2	junction_15	29.7767755385709	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATCTGTCATTTGTA	NA	False	NA	0	True	CATAAA	-11	NA	159285420	159374130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159343175_159345029_159345153_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369951_159371960_159372015_159373163_159373365_159373934
ES.37970.26	chrX	+	7728	29	NIC	ENSMUSG00000031295.14	novel	4341	33	NA	NA	-9	-9	intron_retention	FALSE	canonical	2	5	junction_28	19.9796771745692	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTATAAGCCTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	159285420	159381865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159381463
ES.37970.27	chrX	+	4926	33	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	20.3261492602509	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	5	True	CATAAA	-16	NA	159285421	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312799_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.28	chrX	+	5914	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	-8	-1773	-8	1773	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAGGCATAAGAGTGCC	NA	False	NA	NA	False	NA	NA	NA	159285421	159375910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.29	chrX	+	4213	33	NNC	ENSMUSG00000031295.14	novel	4341	33	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	22.9819902314834	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTATAAGCCTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	159285438	159381865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373934_159374026_159381463
ES.37970.3	chrX	+	5930	32	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_28	25.0150838990515	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285155	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369802_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.32	chrX	+	6015	32	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	10	-10	intron_retention	FALSE	canonical	2	2	junction_4	25.1705111309471	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTGAATCTGTCATTT	NA	False	NA	-3	True	CATAAA	-8	NA	159285439	159374127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312799_159312910_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369951_159371960_159372015_159373163_159373365_159373934
ES.37970.33	chrX	+	6126	31	NIC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	12	-4	intron_retention	FALSE	canonical	3	71	junction_10	13.6702840741027	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285441	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.34	chrX	+	4396	34	NNC	ENSMUSG00000031295.14	novel	4341	33	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	20.2755580756751	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTATAAGCCTCTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	159285458	159381867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934_159374026_159381463
ES.37970.35	chrX	+	11014	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	32	-6913	1	-824	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGGAAGATATTCCAT	NA	False	NA	NA	False	AATAAA	-13	NA	159285461	159381050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.36	chrX	+	5746	34	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	178	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.0455082741866	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	5	True	CATAAA	-16	NA	159285638	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159311747_159311842_159312799_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159343724_159343789_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.37	chrX	+	4113	33	FSM	ENSMUSG00000031295.14	ENSMUST00000112380.9	4341	33	219	9	188	-9	multi-exon	FALSE	canonical	2	5	junction_32	18.8167302137619	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTATAAGCCTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	159285648	159381865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159381463
ES.37970.38	chrX	+	3880	33	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	211	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.432601668351	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285671	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326687_159327217_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.39	chrX	+	7213	33	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	212	3326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	20.5715215771707	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGAGCATGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	159285672	159377463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367511_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.4	chrX	+	6161	34	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-6	-4	intron_retention	FALSE	canonical	0	0	junction_22	33.8270869126959	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285155	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345029_159345153_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360040_159360121_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.40	chrX	+	3974	34	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.1878889958273	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285672	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159302494_159302579_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.42	chrX	+	3610	1	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	214	-21488	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	159285674	159289284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285700_159289300
ES.37970.43	chrX	+	3874	33	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	215	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.5691478615425	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285675	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343168_159345720_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.45	chrX	+	5604	31	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	399	-4	intron_retention	FALSE	canonical	0	0	junction_8	29.8009880522255	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285859	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312686_159312799_159312910_159314185_159315974_159316074_159324364_159324512_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.46	chrX	+	8316	27	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	-2005	0	intron_retention	TRUE	canonical	1	2	junction_12	22.3743037311918	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	8558	False	NA	7	True	CATAAA	-18	NA	159311884	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159345098_159345484_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.47	chrX	+	3596	29	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	26.6342144158791	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	False	NA	5	True	CATAAA	-16	NA	159313831	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345029_159345153_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.49	chrX	+	1936	16	NNC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	4968	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	28.2863139266246	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	4042	False	NA	5	True	CATAAA	-16	NA	159345750	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359778_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.5	chrX	+	3214	28	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	25.9533188618552	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285155	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159364213_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.50	chrX	+	2274	4	ISM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	82698	2	27345	-2	3prime_fragment	FALSE	canonical	3	105	junction_1	11.323525167642	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	3201	False	NA	5	True	CATAAA	-16	NA	159368127	159374135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.51	chrX	+	3268	3	NIC	ENSMUSG00000031295.14	novel	4133	33	NA	NA	28364	-4	intron_retention	FALSE	canonical	3	124	junction_2	4	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	4220	False	NA	3	True	CATAAA	-14	NA	159369146	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159372015_159373163_159373365_159373934
ES.37970.52	chrX	+	2257	1	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	30446	-652	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	6302	False	NA	NA	False	AAGAAA	-16	NA	159371228	159373485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159371200_159373500
ES.37970.53	chrX	+	3755	1	Intergenic	novelGene_31116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGTCTGATCTGGAC	5393	False	NA	NA	False	AATAAA	-23	NA	159377703	159381458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159377700_159381500
ES.37970.6	chrX	+	3946	34	NIC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	18.7602436052563	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285156	159374137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159285289_159285748_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37970.8	chrX	+	5676	30	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-4	-2030	intron_retention	FALSE	canonical	3	10	junction_1	16.9622929372319	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGTTCTGATCACTT	NA	False	NA	NA	False	NA	NA	NA	159285157	159372107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960
ES.37970.9	chrX	+	4086	35	NNC	ENSMUSG00000031295.14	novel	3947	34	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	27.3014062276455	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGTCATTTGTAGAC	NA	False	NA	3	True	CATAAA	-14	NA	159285157	159374133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159285289_159285715_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312686_159312799_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ES.37971.1	chrX	-	324	1	Intergenic	novelGene_31115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	159372810	159372486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159372500_159372800
ES.37972.1	chrX	+	260	1	Intergenic	novelGene_31117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGACCTGCTTGAG	NA	False	NA	NA	False	NA	NA	NA	159391967	159392227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159392000_159392200
ES.37973.1	chrX	+	1435	1	Intergenic	novelGene_31118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	159411250	159412685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159411200_159412700
ES.37974.1	chrX	-	6920	23	NNC	ENSMUSG00000062168.13	novel	2483	16	NA	NA	-30214	3812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	0.839372059664518	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTTCTCAGTTTAAT	NA	False	NA	NA	False	AATAAA	-27	NA	159548975	159402277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_159406700_159407559_159407645_159408672_159408837_159414850_159414958_159416189_159416333_159418003_159418190_159421154_159421302_159424846_159424997_159426263_159426301_159429626_159429794_159455573_159455621_159459628_159459744_159468165_159468336_159474491_159474553_159476482_159476611_159501258_159501337_159502802_159502964_159518431_159518532_159534125_159534228_159540569_159540620_159541193_159541364_159547903_159548010_159548951
ES.37974.2	chrX	-	2858	21	NNC	ENSMUSG00000062168.13	novel	2483	16	NA	NA	-30239	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	0.864580823289529	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTAATTGTTTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	159549000	159406092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_159406700_159407559_159407645_159408672_159408837_159414850_159414958_159416189_159416333_159418003_159418190_159421154_159421302_159424846_159424997_159426263_159426301_159429626_159429794_159455573_159455621_159459628_159459744_159468165_159468336_159474491_159474553_159476482_159476611_159501258_159501337_159502802_159502964_159518431_159518532_159540569_159540620_159547903_159548010_159548951
ES.37974.3	chrX	-	182	1	Intergenic	novelGene_31119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAAGTTGCA	NA	False	NA	NA	False	NA	NA	NA	159451103	159450921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159450900_159451100
ES.37975.1	chrX	-	237	1	Intergenic	novelGene_31120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGTATGACCTTGAGATT	NA	False	NA	NA	False	NA	NA	NA	159552803	159552566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159552600_159552800
ES.37976.1	chrX	+	177	1	Intergenic	novelGene_31121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCAAAAAAGGAACCAG	NA	False	NA	NA	False	NA	NA	NA	159575060	159575237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159575100_159575200
ES.37977.1	chrX	+	187	1	Intergenic	novelGene_31122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAATTAATCTTTACCAA	NA	False	NA	NA	False	NA	NA	NA	159679819	159680006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_159679800_159680000
ES.37978.1	chrX	-	3215	18	ISM	ENSMUSG00000031292.15	ENSMUST00000087104.11	3269	19	66066	-77	-117	77	3prime_fragment	FALSE	canonical	0	0	junction_3	1.211250604822	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACTACTATGAAATAGA	NA	False	NA	NA	False	AGTAAA	-30	NA	159711634	159567226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_159567579_159591470_159591688_159594592_159594713_159599887_159599988_159606970_159607095_159612538_159612645_159612916_159613019_159616863_159617831_159623290_159623443_159629932_159630014_159635136_159635327_159639350_159639442_159641795_159641856_159643929_159644051_159648912_159649050_159659518_159659565_159707447_159707483_159711420
ES.37978.2	chrX	-	3358	20	NNC	ENSMUSG00000031292.15	novel	3269	19	NA	NA	37	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.19091668410366	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTTTCATGTTGGAA	NA	False	NA	NA	False	TATAAA	-18	NA	159777663	159567300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_159567579_159591470_159591688_159594592_159594713_159595923_159596047_159599887_159599988_159606970_159607095_159612538_159612645_159612916_159613019_159616863_159617831_159623290_159623443_159629932_159630014_159635136_159635327_159639350_159639442_159641795_159641856_159643929_159644051_159648912_159649050_159659518_159659565_159707447_159707483_159711420_159711652_159777586
ES.37978.3	chrX	-	3165	18	NIC	ENSMUSG00000031292.15	novel	3269	19	NA	NA	70	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.211250604822	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATACTGTTTCATGTTGG	NA	False	NA	NA	False	TATAAA	-16	NA	159777630	159567302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_159567579_159591470_159591688_159594592_159594713_159599887_159599988_159606970_159607095_159612538_159612645_159612916_159613019_159616863_159617831_159623290_159623443_159629932_159630014_159635136_159635327_159639350_159639442_159641795_159641856_159643929_159644051_159648912_159649050_159659518_159659565_159711420_159711652_159777586
ES.37978.4	chrX	-	5273	1	ISM	ENSMUSG00000031292.15	ENSMUST00000198931.2	9796	17	121824	0	10518	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTGTGAAAACTTTGG	NA	False	NA	NA	False	TATAAA	-16	NA	159589660	159584387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_159584400_159589700
ES.37978.5	chrX	-	6605	1	ISM	ENSMUSG00000031292.15	ENSMUST00000198931.2	9796	17	120260	232	8954	-232	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGACTGCCGGGCTTTC	NA	False	NA	-22	True	AATAAA	-21	NA	159591224	159584619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_159584600_159591200
ES.37978.6	chrX	-	2077	5	NNC	ENSMUSG00000055691.6	novel	2017	2	NA	NA	-87643	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTCTGAGTGATCTTT	NA	False	NA	NA	False	AATAAA	-37	NA	159777691	159685089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_159686688_159686861_159686987_159707447_159707483_159711420_159711652_159777603
ES.37978.7	chrX	-	176	1	Intergenic	novelGene_31123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	159769547	159769371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159769400_159769500
ES.37979.1	chrX	-	182	1	Intergenic	novelGene_31124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGAGTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	159802431	159802249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_159802200_159802400
ES.3798.1	chr10	-	4200	6	NIC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	2	80	intron_retention	FALSE	canonical	3	274	junction_3	42.9120029828485	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTGCTTTGATCATA	3390	False	NA	-1	True	AATAAA	-22	NA	117060393	117051045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117051742_117053116_117053205_117053333_117056333_117056436_117056504_117058078_117058199_117060163
ES.3798.2	chr10	-	1420	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	-13	-80	-13	79	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGTGCTTTGATCAT	3358	False	NA	-2	True	AATAAA	-21	NA	117060425	117051046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ES.3798.3	chr10	-	3356	6	ISM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	15	-79	-2	78	intron_retention	FALSE	canonical	3	274	junction_4	37.3363094051889	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTGTGCTTTGATCA	3386	False	NA	-3	True	AATAAA	-20	NA	117060397	117051047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078
ES.3798.4	chr10	-	3908	6	NNC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	5	78	intron_retention	TRUE	non_canonical	0	0	junction_2	135.594100166637	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGTGTGCTTTGATCA	3393	False	NA	-3	True	AATAAA	-20	NA	117060390	117051047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117051742_117053116_117054872_117055287_117056333_117056436_117056504_117058078_117058199_117060163
ES.3798.5	chr10	-	5857	2	NNC	ENSMUSG00000020171.9	novel	556	2	NA	NA	3074	77	intron_retention	FALSE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGTGTGCTTTGATC	6462	False	NA	-4	True	AATAAA	-19	NA	117057321	117051048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117054872_117055287
ES.3798.6	chr10	-	1265	6	NIC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	22	69	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	135.207987929708	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTACACAGTGTG	3410	False	NA	-12	True	AATAAA	-11	NA	117060373	117051056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117051742_117053116_117053205_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ES.3798.7	chr10	-	2695	6	NIC	ENSMUSG00000020171.9	novel	1327	7	NA	NA	-3	6	intron_retention	FALSE	canonical	3	274	junction_3	42.9343685175408	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTCTTGTGACTTCTC	3385	False	NA	-7	True	AATAAA	-21	NA	117060398	117051119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ES.37980.1	chrX	+	4660	27	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-59	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	107.65328963497	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	119	False	NA	24	True	AATAAA	-33	NA	159865461	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.10	chrX	+	4369	24	NIC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-8	8	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	115.437165291057	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAACAGCTAAGCCTTG	170	False	NA	10	True	AATAAA	-19	NA	159865512	160041200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159865683_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.100	chrX	+	4672	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14631	6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	108.37239244285	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	4662	False	NA	8	True	AATAAA	-17	NA	159921894	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.101	chrX	+	5638	23	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	-193	intron_retention	FALSE	canonical	3	8	junction_14	108.545987512016	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGCAAATTTAGTTT	4662	False	NA	NA	False	AATAAA	-10	NA	159921894	160039689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.102	chrX	+	4439	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	116.70885397956	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	4662	False	NA	11	True	AATAAA	-20	NA	159921894	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.103	chrX	+	3699	23	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	-575	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	101.352914231119	536	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATCATTTTTCTAT	4662	False	NA	NA	False	AATAAA	-32	NA	159921894	160040617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.104	chrX	+	4653	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14631	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.356232076105	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	4662	False	NA	22	True	AATAAA	-31	NA	159921894	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922091_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.105	chrX	+	3351	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14633	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.553747446502	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4664	False	NA	NA	False	ATTAAA	-15	NA	159921896	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.108	chrX	+	4809	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14633	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.642344862659	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4664	False	NA	13	True	AATAAA	-22	NA	159921896	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.11	chrX	+	4788	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.197499536473	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	171	False	NA	21	True	AATAAA	-30	NA	159865513	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.111	chrX	+	3450	29	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14635	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	118.680823030101	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTCTTCAGTTAT	4666	False	NA	NA	False	ATTAAA	-13	NA	159921898	160039895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160013086_160013171_160014395_160014480_160016284_160016300_160017622_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.112	chrX	+	4349	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14637	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	113.453237287614	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	4668	False	NA	11	True	AATAAA	-20	NA	159921900	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.113	chrX	+	3180	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14637	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.643183697647	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	4668	False	NA	NA	False	ATTAAA	-16	NA	159921900	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.114	chrX	+	4248	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14638	8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	118.223443566391	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAACAGCTAAGCCTTG	4669	False	NA	10	True	AATAAA	-19	NA	159921901	160041200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.115	chrX	+	3184	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14638	-181	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	110.202171115267	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTAGAGATAATTCT	4669	False	NA	NA	False	AATAAA	-22	NA	159921901	160039701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.116	chrX	+	3844	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14640	3426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	113.166168076958	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATCCTTCTGTTACTGTG	4671	False	NA	NA	False	AGTAAA	-21	NA	159921903	160026286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004664_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983
ES.37980.117	chrX	+	4471	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14649	-159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.553747446502	538	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCACTTATGTCATTTC	4680	False	NA	NA	False	TTTAAA	-5	NA	159921912	160041033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.119	chrX	+	3270	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14657	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	123.214418390902	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTCTTCAGTTATT	4688	False	NA	NA	False	ATTAAA	-14	NA	159921920	160039896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992607_159992680_159996236_159996321_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.12	chrX	+	3452	29	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-7	-554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.070627894529	537	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTACCTCTCAGCGTAT	171	False	NA	NA	False	AATATA	-18	NA	159865513	160040638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561_160039725_160040487
ES.37980.121	chrX	+	3478	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14658	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.642344862659	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4689	False	NA	NA	False	ATTAAA	-15	NA	159921921	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.123	chrX	+	3191	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14659	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	103.266459220794	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4690	False	NA	NA	False	ATTAAA	-15	NA	159921922	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.124	chrX	+	4570	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14664	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	110.684643183625	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	4695	False	NA	9	True	AATAAA	-18	NA	159921927	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160017610_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.125	chrX	+	3415	28	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14671	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	110.152843059175	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4702	False	NA	NA	False	ATTAAA	-15	NA	159921934	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.127	chrX	+	4490	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12843	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	109.390855993543	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7976	False	NA	13	True	AATAAA	-22	NA	159932902	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.128	chrX	+	3169	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12827	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	104.117313308381	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	7992	False	NA	NA	False	ATTAAA	-16	NA	159932918	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.129	chrX	+	4640	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12825	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	111.428593103147	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7994	False	NA	13	True	AATAAA	-22	NA	159932920	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.13	chrX	+	3550	27	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.492164017027	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	178	False	NA	NA	False	ATTAAA	-15	NA	159865520	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865923_159869958_159870037_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.130	chrX	+	3197	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12821	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.455409033494	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	7998	False	NA	NA	False	ATTAAA	-15	NA	159932924	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.131	chrX	+	4499	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12821	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.197241167201	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	7998	False	NA	24	True	AATAAA	-33	NA	159932924	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011603_160011757_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.132	chrX	+	4315	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12820	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.384957277691	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTAAGCCTTGGATGT	7999	False	NA	15	True	AATAAA	-24	NA	159932925	160041205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.133	chrX	+	4513	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12820	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.930189934052	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	7999	False	NA	24	True	AATAAA	-33	NA	159932925	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.134	chrX	+	4128	21	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12820	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	124.116991181707	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7999	False	NA	13	True	AATAAA	-22	NA	159932925	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.135	chrX	+	4448	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12818	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	112.973016247244	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8001	False	NA	11	True	AATAAA	-20	NA	159932927	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.136	chrX	+	3073	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12816	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	104.20537377883	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	8003	False	NA	NA	False	ATTAAA	-15	NA	159932929	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.137	chrX	+	3324	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12816	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	111.428593103147	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTCTTCAGTTATT	8003	False	NA	NA	False	ATTAAA	-14	NA	159932929	160039896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.138	chrX	+	3241	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12816	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	112.8455652651	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	8003	False	NA	NA	False	ATTAAA	-15	NA	159932929	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.139	chrX	+	4373	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12811	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	8008	False	NA	6	True	AATAAA	-15	NA	159932934	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.14	chrX	+	4846	29	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.975399019405	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	179	False	NA	6	True	AATAAA	-15	NA	159865521	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870092_159878108_159878240_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.140	chrX	+	4510	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12809	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.763841782388	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8010	False	NA	11	True	AATAAA	-20	NA	159932936	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933250_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.141	chrX	+	4532	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12808	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	112.466144239055	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	8011	False	NA	6	True	AATAAA	-15	NA	159932937	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.142	chrX	+	3070	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12807	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	8012	False	NA	NA	False	ATTAAA	-15	NA	159932938	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.143	chrX	+	4205	22	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12806	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	117.344213317458	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8013	False	NA	11	True	AATAAA	-20	NA	159932939	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.144	chrX	+	3438	26	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12806	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.729201196464	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTCTTCAGTTATT	8013	False	NA	NA	False	ATTAAA	-14	NA	159932939	160039896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933247_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.145	chrX	+	4609	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12801	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.455409033494	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	8018	False	NA	8	True	AATAAA	-17	NA	159932944	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933273_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.146	chrX	+	3025	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12800	-185	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	112.466144239055	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTAGTTTAGAGATAA	8019	False	NA	NA	False	AATAAA	-18	NA	159932945	160039697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.147	chrX	+	3478	20	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12800	3429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.639681225207	518	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCTGTTACTGTGTTT	8019	False	NA	NA	False	AGTAAA	-24	NA	159932945	160026289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007458_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983
ES.37980.148	chrX	+	4603	26	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12799	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	113.233563928722	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	8020	False	NA	21	True	AATAAA	-30	NA	159932946	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.15	chrX	+	3618	29	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.371483279752	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	180	False	NA	NA	False	ATTAAA	-16	NA	159865522	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.150	chrX	+	4446	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12799	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	104.117313308381	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	8020	False	NA	13	True	AATAAA	-22	NA	159932946	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.151	chrX	+	4362	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12799	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	99.3253042686149	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	8020	False	NA	13	True	AATAAA	-22	NA	159932946	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.152	chrX	+	4484	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12799	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.455409033494	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8020	False	NA	11	True	AATAAA	-20	NA	159932946	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933111_159936792_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.153	chrX	+	4480	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12798	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.455409033494	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	8021	False	NA	13	True	AATAAA	-22	NA	159932947	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.154	chrX	+	4771	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12795	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	115.98010439461	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	8024	False	NA	21	True	AATAAA	-30	NA	159932950	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.155	chrX	+	4457	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12794	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.138408911676	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	8025	False	NA	8	True	AATAAA	-17	NA	159932951	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936893_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.156	chrX	+	4599	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12794	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.321307401486	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8025	False	NA	11	True	AATAAA	-20	NA	159932951	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933186_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.157	chrX	+	3298	28	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12794	-187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.339739573362	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATTTAGTTTAGAGAT	8025	False	NA	NA	False	AATAAA	-16	NA	159932951	160039695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998173_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020467_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.158	chrX	+	4360	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12793	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	110.471647390299	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	8026	False	NA	11	True	AATAAA	-20	NA	159932952	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.159	chrX	+	3102	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12793	-187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	116.53171470696	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATTTAGTTTAGAGAT	8026	False	NA	NA	False	AATAAA	-16	NA	159932952	160039695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992602_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.16	chrX	+	4687	27	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.706353058317	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	180	False	NA	13	True	AATAAA	-22	NA	159865522	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.160	chrX	+	3138	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12793	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	109.338343063579	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTCAGTTATTTTTAT	8026	False	NA	NA	False	ATTAAA	-19	NA	159932952	160039901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.161	chrX	+	7733	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12793	7	intron_retention	FALSE	canonical	3	8	junction_14	111.263751509645	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	8026	False	NA	9	True	AATAAA	-18	NA	159932952	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.162	chrX	+	3215	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12790	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	108.586186966851	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	8029	False	NA	NA	False	ATTAAA	-15	NA	159932955	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.164	chrX	+	2838	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12780	-184	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	113.132256109391	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAGTTTAGAGATAAT	8039	False	NA	NA	False	AATAAA	-19	NA	159932965	160039698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.165	chrX	+	2953	23	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12780	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	114.858626720989	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	8039	False	NA	NA	False	ATTAAA	-15	NA	159932965	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.166	chrX	+	4336	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12780	4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	109.037583919465	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	8039	False	NA	6	True	AATAAA	-15	NA	159932965	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.167	chrX	+	7659	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12771	4	intron_retention	FALSE	canonical	0	0	junction_1	111.149103747574	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	8048	False	NA	6	True	AATAAA	-15	NA	159932974	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.168	chrX	+	4551	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12771	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.455409033494	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	8048	False	NA	6	True	AATAAA	-15	NA	159932974	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933247_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.169	chrX	+	4499	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-12768	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	108.586186966851	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	8051	False	NA	13	True	AATAAA	-22	NA	159932977	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933107_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.17	chrX	+	3266	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	2	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.197499536473	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAGTTTAGAGATAAT	180	False	NA	NA	False	AATAAA	-19	NA	159865522	160039698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.171	chrX	+	4369	24	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-12762	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.942727629209	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	8057	False	NA	22	True	AATAAA	-31	NA	159932983	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159933142_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.173	chrX	+	4424	26	NNC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-8883	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	116.156267157653	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	NA	False	NA	8	True	AATAAA	-17	NA	159936862	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992595_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.174	chrX	+	2742	24	NIC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-8880	-186	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	120.059563037471	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTAGTTTAGAGATA	NA	False	NA	NA	False	AATAAA	-17	NA	159936865	160039696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.175	chrX	+	4595	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5699	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	113.395590743203	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTAAGCCTTGGATGTTA	NA	False	NA	17	True	AATAAA	-26	NA	159940046	160041207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.176	chrX	+	3267	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5681	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	113.395590743203	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159940064	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.177	chrX	+	3380	15	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	-5654	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	118.056800580336	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	NA	False	NA	22	True	AATAAA	-31	NA	159940091	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_160007490_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.178	chrX	+	3238	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5653	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	110.66352122789	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159940092	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011589_160011757_160013086_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.179	chrX	+	4461	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5653	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	114.557724410981	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159940092	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.18	chrX	+	4849	29	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	120.694334784113	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	180	False	NA	21	True	AATAAA	-30	NA	159865522	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870037_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.180	chrX	+	3148	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5645	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	114.557724410981	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	159940100	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.181	chrX	+	4538	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5645	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.67086928004	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159940100	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.182	chrX	+	2949	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5643	-181	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	110.614186539923	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTAGAGATAATTCT	NA	False	NA	NA	False	AATAAA	-22	NA	159940102	160039701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.183	chrX	+	2895	22	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5642	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	122.253834295698	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCAGTTATTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	159940103	160039900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.184	chrX	+	6050	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5638	-186	intron_retention	FALSE	canonical	0	0	junction_2	115.103898163358	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTAGTTTAGAGATA	NA	False	NA	NA	False	AATAAA	-17	NA	159940107	160039696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159956830_159956897_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.185	chrX	+	3051	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5637	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	106.785405713262	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159940108	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010449_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.186	chrX	+	4361	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5637	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	122.673279320956	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159940108	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.187	chrX	+	4184	22	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5628	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	121.253038393798	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159940117	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.188	chrX	+	4356	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5627	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	118.117016088297	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	NA	False	NA	22	True	AATAAA	-31	NA	159940118	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998179_159998260_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.189	chrX	+	7398	22	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5625	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	111.343944257883	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159940120	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159975188_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.190	chrX	+	4347	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5625	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159940120	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.191	chrX	+	4433	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5617	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	110.614186539923	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	NA	False	NA	21	True	AATAAA	-30	NA	159940128	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.192	chrX	+	4485	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5607	-8	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	118.263772982262	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159940138	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020487_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.193	chrX	+	2035	19	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	-5597	-2138	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	103.15535748461	514	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGGGTGGAAAGT	NA	False	NA	NA	False	ATTAAA	-12	NA	159940148	160020722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159940262_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475
ES.37980.194	chrX	+	4702	24	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	3	-8	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	108.416354209655	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	1338	False	NA	11	True	AATAAA	-20	NA	159945748	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.195	chrX	+	4845	25	NIC	ENSMUSG00000000037.18	novel	3550	26	NA	NA	8	8	combination_of_known_splicesites	FALSE	canonical	2	6	junction_7	119.578593111625	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAACAGCTAAGCCTTG	1343	False	NA	10	True	AATAAA	-19	NA	159945753	160041200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.196	chrX	+	3316	23	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	110.823970689282	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTATGTCTTCAGTTA	1346	False	NA	NA	False	ATTAAA	-12	NA	159945756	160039894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.197	chrX	+	3387	24	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	108.416354209655	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	1349	False	NA	NA	False	ATTAAA	-15	NA	159945759	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.198	chrX	+	4694	24	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	124.366447374339	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTAAGCCTTGGATGT	1350	False	NA	15	True	AATAAA	-24	NA	159945760	160041205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.199	chrX	+	3273	25	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-6	-181	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	112.095910075058	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTAGAGATAATTCT	1351	False	NA	NA	False	AATAAA	-22	NA	159945761	160039701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.2	chrX	+	3323	25	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.274186951211	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	137	False	NA	NA	False	ATTAAA	-15	NA	159865479	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865823_159869958_159870037_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.20	chrX	+	3375	27	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.133714171787	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	186	False	NA	NA	False	ATTAAA	-15	NA	159865528	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.200	chrX	+	4780	25	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	0	5	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	112.095910075058	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	1357	False	NA	24	True	AATAAA	-33	NA	159945767	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159946245_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.202	chrX	+	2942	23	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	14185	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	114.133467252631	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159960240	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.203	chrX	+	3713	21	NNC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	29285	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	113.914386712127	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTAAGCCTTGGATGT	1648	False	NA	15	True	AATAAA	-24	NA	159975340	160041205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160014395_160014480_160016284_160016300_160017622_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.204	chrX	+	3696	20	ISM	ENSMUSG00000000037.18	ENSMUST00000019101.11	4842	26	39235	-9	-32566	-8	3prime_fragment	FALSE	canonical	3	8	junction_7	111.038312870863	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159985002	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.205	chrX	+	3491	14	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-19675	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	116.051304712372	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTAAGCCTTGGATGTTA	9457	False	NA	17	True	AATAAA	-26	NA	159997893	160041207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.206	chrX	+	1810	13	NIC	ENSMUSG00000000037.18	novel	4842	26	NA	NA	-11411	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	121.025565481017	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	160006157	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160006237_160007456_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.207	chrX	+	7848	6	NIC	ENSMUSG00000000037.18	novel	4847	26	NA	NA	-2399	3	intron_retention	FALSE	canonical	3	285	junction_5	12.3547561691844	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	NA	False	NA	22	True	AATAAA	-31	NA	160015169	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.208	chrX	+	1430	6	ISM	ENSMUSG00000000037.18	ENSMUST00000074802.12	3440	24	74527	51	2704	1	3prime_fragment	FALSE	canonical	3	285	junction_5	12.3547561691844	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	160020272	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.209	chrX	+	7469	1	NIC	ENSMUSG00000000037.18	novel	4847	26	NA	NA	4482	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	160033734	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160033700_160041200
ES.37980.21	chrX	+	4670	28	NIC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	19	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	118.310094512889	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	197	False	NA	8	True	AATAAA	-17	NA	159865539	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159865683_159869958_159870037_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.210	chrX	+	3458	2	ISM	ENSMUSG00000000037.18	ENSMUST00000238361.2	1894	3	7109	-11	7109	-6	3prime_fragment	FALSE	canonical	3	42	junction_1	0	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	160036361	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_160038178_160039561
ES.37980.211	chrX	+	2880	1	Genic_Genomic	ENSMUSG00000000037.18	novel	NA	NA	NA	NA	9638	561	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGATACCTTACTCAAGA	NA	False	NA	NA	False	NA	NA	NA	160038890	160041770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_160038900_160041800
ES.37980.22	chrX	+	3441	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.197499536473	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	205	False	NA	NA	False	ATTAAA	-16	NA	159865547	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.23	chrX	+	4539	26	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	28	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.940638592275	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATTAACAGCTAAGCC	206	False	NA	7	True	AATAAA	-16	NA	159865548	160041197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865736_159869958_159870037_159878108_159878187_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.24	chrX	+	3389	29	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	28	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	119.371483279752	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATTTAGTTTAGAGAT	206	False	NA	NA	False	AATAAA	-16	NA	159865548	160039695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870116_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.25	chrX	+	3414	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	53	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	117.353849216487	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	231	False	NA	NA	False	ATTAAA	-15	NA	159865573	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870037_159878108_159878187_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.26	chrX	+	3331	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	4438	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.32629326708	530	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4616	False	NA	NA	False	ATTAAA	-15	NA	159869958	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159870037_159878108_159878240_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.27	chrX	+	4853	29	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	7696	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	109.765241143384	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	7874	False	NA	9	True	AATAAA	-18	NA	159873216	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878187_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.28	chrX	+	4725	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7704	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.511398295124	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	7882	False	NA	24	True	AATAAA	-33	NA	159873224	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873437_159878108_159878187_159882650_159882789_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.29	chrX	+	4762	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7711	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.325102581782	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	7889	False	NA	11	True	AATAAA	-20	NA	159873231	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873437_159878108_159878240_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.3	chrX	+	4816	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-35	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	117.353849216487	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	143	False	NA	21	True	AATAAA	-30	NA	159865485	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870037_159878108_159878187_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.30	chrX	+	4727	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7720	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	110.839606555348	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7898	False	NA	13	True	AATAAA	-22	NA	159873240	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878187_159904019_159904098_159927712_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.31	chrX	+	4540	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7725	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.193732445266	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACAGCTAAGCCTTGGA	7903	False	NA	12	True	AATAAA	-21	NA	159873245	160041202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873437_159878108_159878173_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.32	chrX	+	4358	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7725	5	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.638729013055	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATTAACAGCTAAGCC	7903	False	NA	7	True	AATAAA	-16	NA	159873245	160041197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.33	chrX	+	7809	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7727	-6	intron_retention	FALSE	canonical	3	8	junction_18	108.417039425866	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7905	False	NA	13	True	AATAAA	-22	NA	159873247	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.34	chrX	+	4359	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7728	-8	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	110.919068232394	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	7906	False	NA	11	True	AATAAA	-20	NA	159873248	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.35	chrX	+	4727	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7740	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.79802129222	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7918	False	NA	13	True	AATAAA	-22	NA	159873260	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878187_159882650_159882789_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.36	chrX	+	3379	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7740	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	114.397760612418	530	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	7918	False	NA	NA	False	ATTAAA	-15	NA	159873260	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878263_159894088_159894193_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.37	chrX	+	4823	29	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7740	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	113.66781624092	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	7918	False	NA	6	True	AATAAA	-15	NA	159873260	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878187_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.38	chrX	+	4642	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7741	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.887435681747	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	7919	False	NA	8	True	AATAAA	-17	NA	159873261	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873481_159878108_159878173_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.39	chrX	+	4675	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7746	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	117.446298945921	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	7924	False	NA	9	True	AATAAA	-18	NA	159873266	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878263_159894088_159894193_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.4	chrX	+	3054	26	NIC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-35	-186	combination_of_known_splicesites	FALSE	canonical	2	8	junction_16	104.70377261589	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTAGTTTAGAGATA	143	False	NA	NA	False	AATAAA	-17	NA	159865485	160039696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159865683_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.40	chrX	+	9620	25	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7747	-6	intron_retention	FALSE	canonical	0	0	junction_2	116.89328436893	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7925	False	NA	13	True	AATAAA	-22	NA	159873267	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878187_159882650_159882789_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.41	chrX	+	4637	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	7800	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	110.949833708753	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	7978	False	NA	13	True	AATAAA	-22	NA	159873320	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159873402_159878108_159878379_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.42	chrX	+	4602	28	NIC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	12588	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_18	110.837304610309	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	41	False	NA	11	True	AATAAA	-20	NA	159878108	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159878187_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.43	chrX	+	7560	25	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	12601	-1	intron_retention	FALSE	canonical	0	0	junction_1	110.531292703318	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGCCTTGGATGTTAT	54	False	NA	18	True	AATAAA	-27	NA	159878121	160041208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159878187_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.44	chrX	+	4698	26	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-56	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.82152923297	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159900132	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.45	chrX	+	4842	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-53	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.183042222906	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159900135	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.46	chrX	+	7153	26	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-50	-575	intron_retention	FALSE	canonical	0	0	junction_2	105.648352566427	537	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATCATTTTTCTAT	NA	False	NA	NA	False	AATAAA	-32	NA	159900138	160040617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900321_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.47	chrX	+	4826	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-38	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.251764725999	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATTAACAGCTAAGCC	NA	False	NA	7	True	AATAAA	-16	NA	159900150	160041197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.48	chrX	+	4607	27	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-37	7	combination_of_known_splicesites	FALSE	canonical	3	8	junction_17	101.358377601751	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	NA	False	NA	9	True	AATAAA	-18	NA	159900151	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.49	chrX	+	3447	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-30	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.777194123571	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159900158	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.5	chrX	+	4313	23	NIC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-35	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	115.950972825473	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	143	False	NA	11	True	AATAAA	-20	NA	159865485	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159865683_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.50	chrX	+	3389	28	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-30	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	114.545490570999	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	159900158	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159927758_159927837_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.51	chrX	+	3382	28	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-30	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	105.416568665678	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159900158	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.52	chrX	+	3077	25	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.69143791665	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159900159	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900356_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.53	chrX	+	4591	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-29	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	110.365718028636	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACCACAGCAATTAAC	NA	False	NA	-2	True	AATAAA	-7	NA	159900159	160041188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900321_159904019_159904098_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007459_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.54	chrX	+	3295	27	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	105.219248413427	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTCTTCAGTTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	159900159	160039895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.55	chrX	+	4753	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-29	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.211109419324	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	NA	False	NA	11	True	AATAAA	-20	NA	159900159	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.56	chrX	+	4644	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-27	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	114.211109419324	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	NA	False	NA	9	True	AATAAA	-18	NA	159900161	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900356_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.57	chrX	+	4668	26	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.437089360396	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159900162	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.58	chrX	+	3303	27	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-23	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	110.940652613759	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159900165	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.59	chrX	+	3447	29	NIC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	108.040873548592	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	159900177	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159900321_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.6	chrX	+	6559	26	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	119.342773555838	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	158	False	NA	11	True	AATAAA	-20	NA	159865500	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159869958_159870037_159878108_159878187_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160018460_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.60	chrX	+	4798	29	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.129056019732	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159900185	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900374_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.61	chrX	+	2974	24	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-2	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.523370200327	530	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTAGAGATAATTCT	NA	False	NA	NA	False	AATAAA	-22	NA	159900186	160039701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900461_159904019_159904098_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.62	chrX	+	4519	26	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.258183509724	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	NA	False	NA	13	True	AATAAA	-22	NA	159900186	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159900356_159904019_159904084_159927758_159927837_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.63	chrX	+	4590	27	NNC	ENSMUSG00000000037.18	novel	2931	23	NA	NA	-3244	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	109.788021948269	541	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATTAACAGCTAAGCCT	2290	False	NA	8	True	AATAAA	-17	NA	159904019	160041198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013017_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.64	chrX	+	4517	27	NIC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-8	-8	combination_of_known_splicesites	FALSE	canonical	2	5	junction_25	111.471040631225	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	5526	False	NA	11	True	AATAAA	-20	NA	159907255	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159907426_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.65	chrX	+	3311	27	NIC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	111.202524608437	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	5527	False	NA	NA	False	ATTAAA	-15	NA	159907256	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159907426_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.66	chrX	+	4700	27	NNC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	112.255948301166	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	5527	False	NA	11	True	AATAAA	-20	NA	159907256	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159907426_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013001_160013171_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.67	chrX	+	3523	28	NNC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.389904058058	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	5528	False	NA	NA	False	ATTAAA	-15	NA	159907257	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159907560_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020752_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.68	chrX	+	4616	27	NIC	ENSMUSG00000000037.18	novel	2953	23	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	107.49308495717	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGCTAAGCCTTGGATG	5529	False	NA	14	True	AATAAA	-23	NA	159907258	160041204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_159907426_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.69	chrX	+	3267	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14574	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.553747446502	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATGTCTTCAGTTAT	4605	False	NA	NA	False	ATTAAA	-13	NA	159921837	160039895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922049_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.7	chrX	+	4755	28	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-19	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.830186617872	541	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAACAGCTAAGCCTTG	159	False	NA	10	True	AATAAA	-19	NA	159865501	160041200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159904019_159904084_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.70	chrX	+	3332	26	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14593	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	117.686471609952	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	4624	False	NA	NA	False	ATTAAA	-16	NA	159921856	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.71	chrX	+	4561	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14595	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	103.266459220794	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4626	False	NA	13	True	AATAAA	-22	NA	159921858	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.72	chrX	+	4729	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14595	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	110.202171115267	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4626	False	NA	13	True	AATAAA	-22	NA	159921858	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.73	chrX	+	3424	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14595	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	110.202171115267	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	4626	False	NA	NA	False	ATTAAA	-16	NA	159921858	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.74	chrX	+	4414	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14595	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	110.471647390299	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	4626	False	NA	22	True	AATAAA	-31	NA	159921858	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.76	chrX	+	4402	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14607	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGATGTTATTTTG	4638	False	NA	22	True	AATAAA	-31	NA	159921870	160041212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.77	chrX	+	4749	28	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14607	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.978079383453	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4638	False	NA	13	True	AATAAA	-22	NA	159921870	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922091_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998178_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.78	chrX	+	4873	29	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14610	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	112.269554226079	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCTTGGATGTTATTT	4641	False	NA	20	True	AATAAA	-29	NA	159921873	160041210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.79	chrX	+	4455	24	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14611	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	116.91867821563	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	4642	False	NA	11	True	AATAAA	-20	NA	159921874	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.8	chrX	+	3306	26	NNC	ENSMUSG00000000037.18	novel	1257	12	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	115.14779372615	530	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	163	False	NA	NA	False	ATTAAA	-15	NA	159865505	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159865683_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.80	chrX	+	4604	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14611	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.448479203687	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	4642	False	NA	21	True	AATAAA	-30	NA	159921874	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927707_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.81	chrX	+	4541	25	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14611	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	110.926769825362	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4642	False	NA	13	True	AATAAA	-22	NA	159921874	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.82	chrX	+	4684	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14614	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.553747446502	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	4645	False	NA	21	True	AATAAA	-30	NA	159921877	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.83	chrX	+	4633	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14615	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	107.49308495717	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTGGATGTTATTTT	4646	False	NA	21	True	AATAAA	-30	NA	159921878	160041211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.84	chrX	+	4535	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14615	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	112.59587203801	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	4646	False	NA	6	True	AATAAA	-15	NA	159921878	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998266_160004666_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.85	chrX	+	3176	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14619	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.878556989167	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGTTTAGAGATAATTCT	4650	False	NA	NA	False	AATAAA	-22	NA	159921882	160039701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922193_159927751_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.86	chrX	+	4375	25	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14619	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	114.093894081439	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4650	False	NA	13	True	AATAAA	-22	NA	159921882	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020752_160022745_160022792_160025070_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.87	chrX	+	4661	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14622	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.448479203687	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAATTAACAGCTAAGC	4653	False	NA	6	True	AATAAA	-15	NA	159921885	160041196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.88	chrX	+	3214	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14623	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.642344862659	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTAGTTTAGAGATAA	4654	False	NA	NA	False	AATAAA	-18	NA	159921886	160039697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922091_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.89	chrX	+	4594	25	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14623	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.769285869996	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGATGTTATTTTGCT	4654	False	NA	24	True	AATAAA	-33	NA	159921886	160041214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.90	chrX	+	3281	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14623	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.553747446502	529	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTTCAGTTATTTTT	4654	False	NA	NA	False	ATTAAA	-17	NA	159921886	160039899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922060_159927710_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.91	chrX	+	3270	27	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14630	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	112.420997901774	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTCTTCAGTTATTT	4661	False	NA	NA	False	ATTAAA	-15	NA	159921893	160039897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992193_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160006152_160006237_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160038025_160038178_160039561
ES.37980.92	chrX	+	4183	23	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14630	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_21	110.043642732259	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	4661	False	NA	9	True	AATAAA	-18	NA	159921893	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160029252_160029364_160039561
ES.37980.93	chrX	+	3063	24	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14630	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	106.161164352296	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTCTTCAGTTATT	4661	False	NA	NA	False	ATTAAA	-14	NA	159921893	160039896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.94	chrX	+	7170	19	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14630	1	intron_retention	FALSE	canonical	3	10	junction_12	89.6863705460779	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCTTGGATGTTATTT	4661	False	NA	20	True	AATAAA	-29	NA	159921893	160041210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160013086_160013171_160014395_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.95	chrX	+	3303	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14630	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	111.202524608437	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTCTTCAGTTATT	4661	False	NA	NA	False	ATTAAA	-14	NA	159921893	160039896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.96	chrX	+	4642	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	116.078001361154	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGCTAAGCCTTGG	4662	False	NA	11	True	AATAAA	-20	NA	159921894	160041201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922190_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992607_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020487_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.97	chrX	+	3132	24	NNC	ENSMUSG00000000037.18	novel	1894	3	NA	NA	14631	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	115.750268957377	529	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTTCAGTTATTTT	4662	False	NA	NA	False	ATTAAA	-16	NA	159921894	160039898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160038025_160038178_160039561
ES.37980.98	chrX	+	4577	26	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.553747446502	540	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGCTAAGCCTTGGAT	4662	False	NA	13	True	AATAAA	-22	NA	159921894	160041203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922060_159927710_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160007456_160007541_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37980.99	chrX	+	4605	27	NNC	ENSMUSG00000000037.18	novel	517	3	NA	NA	14631	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	111.202524608437	540	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAACAGCTAAGCCTT	4662	False	NA	9	True	AATAAA	-18	NA	159921894	160041199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_159922056_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009_159985094_159992190_159992266_159992604_159992680_159996236_159996321_159998175_159998260_160004661_160004746_160006152_160006237_160008872_160008957_160010368_160010453_160011672_160011757_160013086_160013171_160014395_160014480_160017608_160017693_160020475_160020754_160022745_160022861_160024983_160025188_160026361_160026545_160029252_160029364_160039561
ES.37981.1	chrX	-	168	1	Intergenic	novelGene_31125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAGTCTCGAGCTA	NA	False	NA	NA	False	NA	NA	NA	160064197	160064029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_160064000_160064200
ES.37982.1	chrX	+	5090	15	NIC	ENSMUSG00000108981.2	novel	1272	9	NA	NA	12	6	combination_of_known_junctions	TRUE	canonical	2	10	junction_5	4.38748219369606	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTTGTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-35	NA	160080774	160149254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160080868_160083835_160084019_160090688_160090874_160106160_160106266_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.2	chrX	+	4988	14	NNC	ENSMUSG00000108981.2	novel	1272	9	NA	NA	-9	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.0551504540296	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTTTGATAAGTACAT	NA	False	NA	NA	False	AATAAA	-16	NA	160080789	160149182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_160080868_160083835_160084019_160090688_160090874_160106160_160106266_160107235_160107567_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.3	chrX	+	5056	15	FSM	ENSMUSG00000108981.2	ENSMUST00000207320.2	5010	15	-37	-9	-25	9	multi-exon	FALSE	canonical	1	1	junction_1	5.75210697865378	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-38	NA	160081337	160149257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_160081394_160083835_160084019_160090688_160090874_160106160_160106266_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.4	chrX	+	4929	14	NIC	ENSMUSG00000108981.2	novel	5010	15	NA	NA	-6	6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.68921236994143	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTTGTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-35	NA	160081356	160149254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160081394_160083835_160084019_160090688_160090874_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.5	chrX	+	5440	15	NNC	ENSMUSG00000108981.2	novel	5010	15	NA	NA	17	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.75210697865378	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATATTTTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	160081391	160149251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_160081838_160083835_160084019_160090688_160090874_160106160_160106266_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.6	chrX	+	4989	14	ISM	ENSMUSG00000108981.2	ENSMUST00000207320.2	5010	15	2455	8	2455	-8	3prime_fragment	FALSE	canonical	2	10	junction_4	4.49588898344691	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTCTCAACATAAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	160083829	160149240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_160084019_160090688_160090874_160106160_160106266_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.7	chrX	+	4901	13	NIC	ENSMUSG00000108981.2	novel	5010	15	NA	NA	2455	9	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5.73185542967255	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-38	NA	160083829	160149257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_160084019_160090688_160090874_160107235_160107483_160109457_160109572_160114803_160114930_160116053_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.8	chrX	+	4790	13	NNC	ENSMUSG00000108981.2	novel	5010	15	NA	NA	2455	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.89756398222509	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-38	NA	160083829	160149257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_160084019_160090688_160090874_160107235_160107483_160109457_160109572_160114803_160114930_160116164_160116204_160117551_160117699_160123836_160123936_160136646_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37982.9	chrX	+	5381	5	ISM	ENSMUSG00000108981.2	ENSMUST00000207320.2	5010	15	53532	-6	53532	6	3prime_fragment	FALSE	canonical	3	12	junction_4	5.67890834580027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTTGTTTTGTTTTG	8886	False	NA	NA	False	AATAAA	-35	NA	160134906	160149254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_160136851_160137986_160138109_160140870_160141061_160143316_160143521_160146333
ES.37983.1	chrX	-	178	1	Intergenic	novelGene_31126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGAAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	160396133	160395955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_160396000_160396100
ES.37984.1	chrX	-	3209	7	NIC	ENSMUSG00000086540.3	novel	2537	9	NA	NA	48	1011	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAATCTCTCATTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	160615124	160596674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_160598302_160600730_160600871_160602148_160603164_160604291_160604397_160608288_160608373_160610607_160610743_160615021
ES.37985.1	chrX	-	4790	10	NNC	ENSMUSG00000059493.14	novel	8805	9	NA	NA	233053	193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.684934889218775	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTTCTGTCTCTTGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	160709331	160619617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_160620418_160622794_160622922_160623200_160626180_160627167_160627300_160630017_160630211_160632470_160632534_160654464_160654599_160658235_160658389_160662586_160662730_160709265
ES.37986.1	chrX	+	516	1	FSM	ENSMUSG00000059461.8	ENSMUST00000118642.2	387	1	-41	-88	-41	88	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTCTTAAAAGTAGGAA	NA	False	NA	NA	False	NA	NA	NA	161349811	161350327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161349800_161350300
ES.37987.1	chrX	-	6275	16	NNC	ENSMUSG00000040855.16	novel	7675	18	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.997775303139718	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTGGTGTCCTGGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	161426607	161194949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161199391_161200512_161200608_161210648_161210755_161221643_161221790_161224032_161224117_161254790_161254853_161297274_161297345_161301324_161301420_161303116_161303260_161305917_161305982_161309253_161309393_161329750_161329846_161335538_161335663_161337792_161337942_161348223_161348348_161426269
ES.37987.2	chrX	-	7381	15	NIC	ENSMUSG00000040855.16	novel	7675	18	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	1.01267477705413	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTGTCCTGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	161426589	161194950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161200608_161210648_161210755_161221643_161221790_161224032_161224117_161254790_161254853_161297274_161297348_161301324_161301420_161303116_161303260_161305917_161305982_161309253_161309393_161329750_161329846_161335538_161335663_161337792_161337942_161348223_161348348_161426269
ES.37987.3	chrX	-	7268	15	NIC	ENSMUSG00000040855.16	novel	7675	18	NA	NA	6	-164	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	1.01267477705413	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTGTGATTTGTAGA	NA	False	NA	NA	False	AATAAA	-20	NA	161426639	161195113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161200608_161210648_161210755_161221643_161221790_161224032_161224117_161254790_161254853_161297274_161297348_161301324_161301420_161303116_161303260_161305917_161305982_161309253_161309393_161329750_161329846_161335538_161335663_161337792_161337942_161348223_161348348_161426269
ES.37987.4	chrX	-	176	1	Intergenic	novelGene_31127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGAAGCTGACA	NA	False	NA	NA	False	NA	NA	NA	161296153	161295977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161296000_161296200
ES.37987.5	chrX	-	176	1	Intergenic	novelGene_31128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	161388842	161388666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161388700_161388800
ES.37988.1	chrX	+	181	1	Intergenic	novelGene_31129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTGAGAGATAGG	NA	False	NA	NA	False	NA	NA	NA	161444461	161444642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161444500_161444600
ES.37989.1	chrX	+	162	1	Intergenic	novelGene_31130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	161449969	161450131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161450000_161450100
ES.3799.1	chr10	-	161	1	Intergenic	novelGene_2887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	117167337	117167176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117167200_117167300
ES.37990.1	chrX	-	179	1	Intergenic	novelGene_31131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAAATTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	161487994	161487815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161487800_161488000
ES.37991.1	chrX	+	195	1	Intergenic	novelGene_31132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAAGGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	161491681	161491876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161491700_161491900
ES.37992.1	chrX	+	174	1	Intergenic	novelGene_31133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	161503745	161503919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161503700_161503900
ES.37993.1	chrX	-	1054	2	NNC	ENSMUSG00000086034.2	novel	1210	2	NA	NA	81	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACTGTCATTACTAG	NA	False	NA	NA	False	AATAAA	-14	NA	161519528	161518088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161519045_161519430
ES.37994.1	chrX	-	178	1	Intergenic	novelGene_31134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAATGGAGCA	NA	False	NA	NA	False	NA	NA	NA	161527189	161527011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161527000_161527200
ES.37995.1	chrX	-	272	1	Intergenic	novelGene_31135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGCAAGTCCTAGGTC	7953	False	NA	NA	False	NA	NA	NA	161538797	161538525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161538500_161538800
ES.37996.1	chrX	+	2146	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-204	302	-204	34	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTTTGTTTTGTTCTT	NA	False	NA	2	True	AATAAA	-9	NA	161543193	161561786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.10	chrX	+	1925	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	5	31	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	880.665788710427	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543402	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543695_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.11	chrX	+	1950	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	6	31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	884.924323234049	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543403	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558714_161558790_161560767_161560879_161561343
ES.37996.12	chrX	+	1949	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	8	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	879.893532252155	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543405	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560749_161560879_161561343
ES.37996.13	chrX	+	4026	10	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	9	31	intron_retention	FALSE	canonical	3	2711	junction_3	186.063310611081	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543406	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556515_161557548_161557626_161558731_161560879_161561343
ES.37996.14	chrX	+	4743	10	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	9	36	intron_retention	FALSE	canonical	3	2711	junction_3	173.707573201787	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTGTTTTGTTCTTTT	NA	False	NA	4	True	AATAAA	-11	NA	161543406	161561788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161556319_161556436_161556515_161557548_161557626_161558731_161560879_161561343
ES.37996.15	chrX	+	1921	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-4	34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	887.976769854737	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTTTGTTTTGTTCTT	NA	False	NA	2	True	AATAAA	-9	NA	161543412	161561786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552928_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.16	chrX	+	5497	6	NIC	ENSMUSG00000031353.14	novel	1430	10	NA	NA	-1	19	intron_retention	FALSE	canonical	3	2711	junction_3	179.475457932276	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCCAGGAAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	161543415	161558910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161556319_161556436
ES.37996.18	chrX	+	1911	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-18	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	887.74192139848	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543439	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561329
ES.37996.19	chrX	+	2180	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	887.976769854737	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATATCTGCATCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	161543454	161562088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554055_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.2	chrX	+	3961	11	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-36	39	intron_retention	FALSE	canonical	3	2711	junction_3	176.520707000624	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543361	161561791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161560879_161561343
ES.37996.20	chrX	+	5483	8	NIC	ENSMUSG00000031353.14	novel	1430	10	NA	NA	-1	39	intron_retention	FALSE	canonical	3	2711	junction_3	198.603491758769	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161543456	161561791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161557626_161558731
ES.37996.21	chrX	+	2709	11	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	31	intron_retention	FALSE	canonical	3	2711	junction_3	172.231123784292	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543457	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.22	chrX	+	1921	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	0	31	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	878.764873262091	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543457	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560725_161560879_161561343
ES.37996.24	chrX	+	4325	10	FSM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	0	-2895	0	34	multi-exon	FALSE	canonical	3	2711	junction_3	178.323675750959	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAAGTTTGTTTTGTTCTT	NA	False	NA	2	True	AATAAA	-9	NA	161543457	161561786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731
ES.37996.25	chrX	+	1904	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	1	31	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_9	882.387257799699	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543458	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558705_161558790_161560767_161560879_161561343
ES.37996.26	chrX	+	2912	11	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	1	31	intron_retention	FALSE	canonical	3	2711	junction_3	179.690845621028	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543458	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.29	chrX	+	1447	10	FSM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	2	-19	2	19	multi-exon	FALSE	canonical	3	2711	junction_3	178.323675750959	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCCAGGAAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	161543459	161558910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731
ES.37996.3	chrX	+	2284	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-29	-11	-29	11	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTTTTCACAGTTA	NA	False	NA	NA	False	AATAAA	-28	NA	161543368	161562099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.30	chrX	+	1850	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	17	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	885.206237350725	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543474	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557614_161558731_161558790_161560767_161560879_161561343
ES.37996.32	chrX	+	1374	9	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	18	1144	18	-1144	5prime_fragment	FALSE	canonical	3	2711	junction_3	188.908335906598	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTCTGTTCTGTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	161543475	161557747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548
ES.37996.34	chrX	+	2257	12	NIC	ENSMUSG00000031353.14	novel	705	6	NA	NA	-221	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	883.766348464166	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATATCTGCATCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	161543840	161562088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161544160_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.35	chrX	+	1923	12	NIC	ENSMUSG00000031353.14	novel	705	6	NA	NA	-192	31	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	883.766348464166	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543869	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161544160_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.36	chrX	+	2327	11	ISM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	479	305	-185	31	3prime_fragment	FALSE	canonical	3	2711	junction_2	181.912176612782	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543876	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.37	chrX	+	2042	12	NNC	ENSMUSG00000031353.14	novel	705	6	NA	NA	-178	31	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	883.484461316909	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543883	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161544293_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.38	chrX	+	214	1	Intergenic	novelGene_31137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTGCGAGTACTCCCTC	NA	False	NA	NA	False	NA	NA	NA	161548453	161548667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161548500_161548700
ES.37996.39	chrX	+	4363	9	NIC	ENSMUSG00000031353.14	novel	1862	12	NA	NA	5714	31	intron_retention	FALSE	canonical	3	69	junction_1	981.02311867509	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161549775	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161551994_161552786_161552934_161554048_161554165_161555200_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.4	chrX	+	1941	12	FSM	ENSMUSG00000031353.14	ENSMUST00000112327.8	1862	12	-48	-31	-29	31	multi-exon	FALSE	canonical	3	69	junction_3	868.427533053443	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543368	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552786_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.40	chrX	+	1344	9	ISM	ENSMUSG00000031353.14	ENSMUST00000112327.8	1862	12	9341	-31	-4816	31	3prime_fragment	FALSE	canonical	3	2824	junction_1	153.583853317984	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161552757	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.41	chrX	+	4444	6	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-4786	31	intron_retention	FALSE	canonical	3	2824	junction_1	181.005414283662	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161552787	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161552934_161554048_161554165_161555200_161555362_161556191_161557626_161558731_161560879_161561343
ES.37996.42	chrX	+	1275	9	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-4754	31	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1006.56852101583	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161552819	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558782_161560766_161560879_161561343
ES.37996.43	chrX	+	6460	1	NIC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-2242	39	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTGTTCTTTTAGA	NA	False	NA	7	True	AATAAA	-14	NA	161555331	161561791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161555300_161561800
ES.37996.44	chrX	+	807	5	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-1138	31	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	1266.70919610619	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161556435	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161556515_161557548_161557626_161558731_161558790_161560725_161560879_161561343
ES.37996.45	chrX	+	3329	2	NIC	ENSMUSG00000031353.14	novel	784	3	NA	NA	-789	3	intron_retention	FALSE	canonical	3	3150	junction_1	0	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATCTGCATCATTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	161556784	161562091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161558790_161560767
ES.37996.46	chrX	+	5290	5	Antisense	novelGene_ENSMUSG00000038344.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTATGTCTAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	161566562	161593680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_161570675_161573607_161573807_161580637_161580806_161590480_161591122_161593510
ES.37996.47	chrX	+	183	1	Intergenic	novelGene_31138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACGCCTTTA	NA	False	NA	NA	False	NA	NA	NA	161582236	161582419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161582200_161582400
ES.37996.48	chrX	+	172	1	Intergenic	novelGene_31139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	161589533	161589705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161589500_161589700
ES.37996.49	chrX	+	175	1	Intergenic	novelGene_31140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161593483	161593658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161593500_161593700
ES.37996.5	chrX	+	1989	13	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-16	37733	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	850.352867931896	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTAGAAGGCCACCCTG	NA	False	NA	NA	False	NA	NA	NA	161543381	161599821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343_161561792_161599795
ES.37996.50	chrX	+	180	1	Intergenic	novelGene_31141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	161597320	161597500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161597300_161597500
ES.37996.6	chrX	+	4001	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	-5	31	intron_retention	FALSE	canonical	0	0	junction_2	1158.75670048077	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543392	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544570_161544716_161547439_161547519_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161560879_161561343
ES.37996.7	chrX	+	1800	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	-5	449	-5	-113	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGCTGGGTATTGCC	NA	False	NA	NA	False	GATAAA	-41	NA	161543392	161561639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37996.8	chrX	+	1779	8	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	-65	1856	-5	1809	5prime_fragment	FALSE	canonical	3	2711	junction_3	198.491247943591	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTGTTGCTGTCAT	NA	False	NA	NA	False	TATAAA	-15	NA	161543392	161557035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436
ES.37996.9	chrX	+	1928	12	NNC	ENSMUSG00000031353.14	novel	2244	12	NA	NA	2	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	884.612031503637	1189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTTTGTTTTGTT	NA	False	NA	-1	True	AATAAA	-6	NA	161543399	161561783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161543704_161544579_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ES.37997.1	chrX	-	179	1	Intergenic	novelGene_31136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTACAAAAAAAA	1213	False	NA	NA	False	NA	NA	NA	161545537	161545358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161545400_161545500
ES.37998.1	chrX	-	4784	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	93	-1162	93	1162	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGATTTCATATCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	161612357	161560752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.12	chrX	-	12605	5	NIC	ENSMUSG00000038344.15	novel	2525	6	NA	NA	64	-2	intron_retention	FALSE	canonical	3	191	junction_2	21.2132034355964	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGCTTCTGTGTATTA	NA	False	NA	NA	False	AGTAAA	-15	NA	161612386	161561916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.13	chrX	-	3355	8	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	109	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	66.1467138647268	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGCTTCTGTGTATTA	NA	False	NA	NA	False	AGTAAA	-15	NA	161612341	161561916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161612234
ES.37998.14	chrX	-	3508	7	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	62	-4	intron_retention	FALSE	canonical	0	0	junction_2	80.2920018155953	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACAGCTTCTGTGTAT	NA	False	NA	NA	False	AGTAAA	-13	NA	161612388	161561918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.15	chrX	-	3577	9	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	109	-5	intron_retention	FALSE	canonical	0	0	junction_6	59.9056549918286	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAACAGCTTCTGTGTA	NA	False	NA	NA	False	AGTAAA	-12	NA	161612341	161561919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161590480_161590573_161594287_161594592_161612234
ES.37998.16	chrX	-	3725	10	NNC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	50	-6	intron_retention	FALSE	canonical	0	0	junction_9	68.0930735586716	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAACAGCTTCTGTGT	NA	False	NA	NA	False	AGTAAA	-11	NA	161612400	161561920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612315
ES.37998.18	chrX	-	3694	12	NNC	ENSMUSG00000038344.15	novel	3715	11	NA	NA	110	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	74.1227483177858	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATTAACAGCTTCTGT	NA	False	NA	NA	False	AGTAAA	-9	NA	161612340	161561922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612041_161612139_161612234
ES.37998.19	chrX	-	2645	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	83	1134	83	-1134	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTCAATTGGCTAAA	NA	False	NA	NA	False	ATTAAA	-31	NA	161612367	161563048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.2	chrX	-	4923	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	89	-1150	89	1150	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAAGGTCTTGA	NA	False	NA	NA	False	AATAAA	-4	NA	161612361	161560764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.20	chrX	-	2461	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	109	1145	109	-1145	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGAGACTGACTTGTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	161612341	161563059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.21	chrX	-	2055	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	88	1572	88	-1572	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTCTGGCTTTGTTGA	NA	False	NA	NA	False	CATAAA	-17	NA	161612362	161563486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.22	chrX	-	1909	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	62	1891	62	-1891	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATATTCTCCCGATGG	NA	False	NA	NA	False	ACTAAA	-18	NA	161612388	161563805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.23	chrX	-	1889	9	ISM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	93	4540	93	-4540	5prime_fragment	FALSE	canonical	3	54	junction_7	63.0530530585157	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTAGTCAAGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	161612357	161566454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.25	chrX	-	5104	6	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	93	-4541	intron_retention	FALSE	canonical	3	121	junction_1	39.9879981994598	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTAGTCAAGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	161612357	161566455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.26	chrX	-	8035	5	NIC	ENSMUSG00000038344.15	novel	2525	6	NA	NA	93	-4543	intron_retention	FALSE	canonical	3	191	junction_2	21.2132034355964	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTAGTCAAGTTGC	NA	False	NA	NA	False	NA	NA	NA	161612357	161566457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.27	chrX	-	2776	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	36	9859	36	139	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTCTGTAATCCTGG	NA	False	NA	-12	True	ATTAAA	-27	NA	161612414	161571773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.28	chrX	-	2561	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	92	-128	92	127	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGTTGGTTTTGT	NA	False	NA	-24	True	ATTAAA	-15	NA	161612358	161571785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.29	chrX	-	2491	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	57	-23	57	22	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGATTTCTTTGTCCTG	NA	False	NA	16	True	AATAAA	-39	NA	161612393	161571890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.3	chrX	-	3322	8	NIC	ENSMUSG00000038344.15	novel	3715	11	NA	NA	109	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	82.9465035367953	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGTGTATTATTCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	161612341	161561910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.30	chrX	-	2642	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	47	9982	47	16	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATACAAGATTTCTTT	NA	False	NA	10	True	AATAAA	-33	NA	161612403	161571896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.31	chrX	-	2078	4	NNC	ENSMUSG00000038344.15	novel	2525	6	NA	NA	124	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	106.512388429182	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTCATCTCCAAAATAC	NA	False	NA	-1	True	AATAAA	-22	NA	161612326	161571907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161573803_161580635_161580667_161594531_161594592_161612234
ES.37998.32	chrX	-	1059	6	NNC	ENSMUSG00000038344.15	novel	2525	6	NA	NA	101	4	intron_retention	FALSE	canonical	3	9	junction_1	82.2192191643779	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTCATCTCCAAAATA	NA	False	NA	-2	True	AATAAA	-21	NA	161612349	161571908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161572091_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.33	chrX	-	898	7	NNC	ENSMUSG00000038344.15	novel	2525	6	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.9038181907217	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATGTCTCATCTCCAA	NA	False	NA	-6	True	AATAAA	-17	NA	161612341	161571912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161572089_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.34	chrX	-	2265	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	180	10226	180	-227	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTATTTGCTTTTCTT	NA	False	NA	NA	False	CATAAA	-14	NA	161612270	161572140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.35	chrX	-	1672	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	56	10943	56	-944	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGGCCTTTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	161612394	161572857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.36	chrX	-	3537	5	Intergenic	novelGene_31142	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	161606985	161597657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161598171_161598273_161599513_161600262_161601000_161601312_161601622_161606246
ES.37998.37	chrX	-	5043	1	Genic_Genomic	ENSMUSG00000038344.15	novel	NA	NA	NA	NA	281	3929	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGCAGAGTGGGAAACT	NA	False	NA	NA	False	NA	NA	NA	161612169	161607126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_161607100_161612200
ES.37998.38	chrX	-	4905	2	NNC	ENSMUSG00000038344.15	novel	295	2	NA	NA	93	3929	intron_retention	FALSE	canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGCAGAGTGGGAAACT	NA	False	NA	NA	False	NA	NA	NA	161612357	161607126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161607193_161607518
ES.37998.4	chrX	-	3653	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	64	-2	64	2	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	161612386	161561912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37998.5	chrX	-	3849	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	15	-2	15	2	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	161612435	161561912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.6	chrX	-	3683	9	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	61	2	intron_retention	FALSE	canonical	0	0	junction_4	73.737710840519	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTCTGTGTATTATTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	161612389	161561912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.7	chrX	-	3657	3	NIC	ENSMUSG00000038344.15	novel	5399	8	NA	NA	14787	1	intron_retention	FALSE	canonical	0	0	junction_1	122.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTGTGTATTATTC	NA	False	NA	NA	False	AGTAAA	-18	NA	161580690	161561913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161565321_161573607_161573803_161580635
ES.37998.8	chrX	-	4583	9	NIC	ENSMUSG00000038344.15	novel	3862	10	NA	NA	89	0	intron_retention	FALSE	canonical	3	89	junction_3	55.3103460032569	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612361	161561914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ES.37998.9	chrX	-	3500	10	NIC	ENSMUSG00000038344.15	novel	3715	11	NA	NA	93	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	75.1730513835975	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGCTTCTGTGTATTA	NA	False	NA	NA	False	AGTAAA	-15	NA	161612357	161561916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ES.37999.1	chrX	+	179	1	Intergenic	novelGene_31143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAGACAATGGAGCG	NA	False	NA	NA	False	NA	NA	NA	161618930	161619109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161618900_161619100
ES.38.1	chr1	-	1424	4	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGTTCTTGTTGTTGT	3175	False	NA	NA	False	AATAAA	-13	NA	6379877	6356956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6357964_6358953_6359194_6377844_6377905_6379760
ES.380.1	chr1	-	4258	1	Antisense	novelGene_ENSMUSG00000103945.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAACCAGGCAAAACCCA	NA	False	NA	NA	False	AGTAAA	-23	NA	43604770	43600512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_43600500_43604800
ES.3800.1	chr10	-	8995	1	Genic_Genomic	ENSMUSG00000055531.13	novel	NA	NA	NA	NA	5515	3126	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGCTCCGGGATTCCC	3823	False	NA	NA	False	NA	NA	NA	117186446	117177451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117177500_117186400
ES.3800.10	chr10	-	6641	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-41	-4373	0	4	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCAGTTTGTTCTTT	4474	False	NA	-8	True	AATAAA	-17	NA	117212875	117180573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.101	chr10	-	6415	9	FSM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	-35	-2561	7	-1870	multi-exon	FALSE	canonical	3	507	junction_4	46.3355627461241	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGTAAATTTTATGTCT	4481	False	NA	-7	True	AATAAA	-13	NA	117212868	117187148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.102	chr10	-	4877	5	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	-42	-1870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	266.181329172427	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGTAAATTTTATGTCT	NA	False	NA	-7	True	AATAAA	-13	NA	117196891	117187148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117191432_117191839_117192033_117194897_117195052_117196344_117196461_117196760
ES.3800.103	chr10	-	3092	10	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	1	-1870	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	191.528420351835	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGTAAATTTTATGTCT	4517	False	NA	-7	True	AATAAA	-13	NA	117212832	117187148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117188553_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.105	chr10	-	2389	11	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	7	1708	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	266.523094684119	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTTAGACTCTGTTG	4481	False	NA	NA	False	AATAAA	-22	NA	117212868	117188001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117188553_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.106	chr10	-	4353	8	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	-2908	1708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.392564501523	645	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTTTAGACTCTGTTG	NA	False	NA	NA	False	AATAAA	-22	NA	117202046	117188001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117191009_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985
ES.3800.107	chr10	-	5443	10	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	2	1663	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	212.086984251483	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTGTGTTCTAGTCAA	4476	False	NA	NA	False	AATAAA	-16	NA	117212873	117188046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.108	chr10	-	4090	4	ISM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	14934	-361	-1050	361	3prime_fragment	FALSE	canonical	3	530	junction_1	39.5333895446481	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTTACTGTCCAGTTGC	NA	False	NA	NA	False	AATAAA	-27	NA	117197899	117189348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760
ES.3800.109	chr10	-	3525	11	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	7	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	236.860634129017	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCAGTCTCTGTATAA	4481	False	NA	NA	False	AATAAA	-30	NA	117212868	117189701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117191432_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.11	chr10	-	6627	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-66	4	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	249.077678646642	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCAGTTTGTTCTTT	8503	False	NA	-8	True	AATAAA	-17	NA	117215986	117180573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.110	chr10	-	3529	11	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	259.634454570267	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGTCTCTGTAT	4515	False	NA	NA	False	AATAAA	-28	NA	117212834	117189703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117191432_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.111	chr10	-	3772	10	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	13	6	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	184.803465843188	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGTCTCTGTAT	4487	False	NA	NA	False	AATAAA	-28	NA	117212862	117189703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.113	chr10	-	3825	9	ISM	ENSMUSG00000055531.13	ENSMUST00000176686.8	2200	10	42	4766	-2	0	5prime_fragment	FALSE	canonical	3	201	junction_1	139.150772545466	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTAAGTGTCAGTCT	4513	False	NA	NA	False	AATAAA	-22	NA	117212836	117189709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.116	chr10	-	3855	11	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	-12	-6	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	255.640939600839	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACCAATAAAGTAAGTGT	4503	False	NA	NA	False	AATAAA	-16	NA	117212846	117189715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.117	chr10	-	3194	9	FSM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	-40	665	2	-665	multi-exon	FALSE	canonical	3	507	junction_4	46.3355627461241	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTTGTTTGTTTATT	4476	False	NA	NA	False	GATAAA	-19	NA	117212873	117190374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.118	chr10	-	3049	10	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	20	-668	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	184.803465843188	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTTTGTTTGTTT	4536	False	NA	NA	False	GATAAA	-16	NA	117212813	117190377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.119	chr10	-	1563	2	Genic_Genomic	ENSMUSG00000055531.13	novel	6526	10	NA	NA	10	-3470	multi-exon	FALSE	canonical	0	0	junction_1	0	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTAATAATACCGTTTT	4484	False	NA	NA	False	NA	NA	NA	117212865	117205552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117205606_117211355
ES.3800.120	chr10	-	3568	1	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	1	-7227	mono-exon	FALSE	NA	NA	NA	NA	NA	547	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATGTGAGTACA	4472	False	NA	NA	False	NA	NA	NA	117212877	117209309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117209300_117212900
ES.3800.14	chr10	-	5269	5	NNC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.023895939184	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTGCAGTTTGTTCT	4517	False	NA	-10	True	AATAAA	-15	NA	117212832	117180575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192033_117194897_117194955_117203760_117203894_117212743
ES.3800.15	chr10	-	6563	10	NNC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	245.24475051328	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTGCAGTTTGTTC	4476	False	NA	-11	True	AATAAA	-14	NA	117212873	117180576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196340_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.17	chr10	-	6726	12	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-60	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	273.570152061904	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTGCAGTTTGTTC	8509	False	NA	-11	True	AATAAA	-14	NA	117215980	117180576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.19	chr10	-	6407	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-28	147	-25	-147	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTAATGTTTACT	4446	False	NA	NA	False	ATTAAA	-17	NA	117212903	117180724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.2	chr10	-	9648	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	2	3121	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATGCTCCGGGA	4476	False	NA	NA	False	NA	NA	NA	117212873	117177456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.20	chr10	-	6489	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	2	-149	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	232.89227123286	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTTTAATGTTTA	4476	False	NA	NA	False	ATTAAA	-15	NA	117212873	117180726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.21	chr10	-	6442	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-3	-151	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	237.062460123909	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTTTAATGTT	4512	False	NA	NA	False	ATTAAA	-13	NA	117212837	117180728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185407_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.22	chr10	-	5723	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	0	-764	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCCTTCATTTTAGTAA	4516	False	NA	NA	False	ATTAAA	-18	NA	117212833	117181341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.23	chr10	-	5329	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	34	1163	-7	-1163	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTCTTGGCATTAGAA	4508	False	NA	NA	False	NA	NA	NA	117212841	117181740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.24	chr10	-	5178	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-10	-1320	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGTGGCCTTATACGT	4505	False	NA	NA	False	AATAAA	-27	NA	117212844	117181897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.27	chr10	-	5287	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-28	-3032	13	-1337	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGAATTTCTTGA	4487	False	NA	NA	False	AATAAA	-10	NA	117212862	117181914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.28	chr10	-	4484	10	NNC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-17	-1936	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	216.750638998303	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTATAATATTTTATAG	4498	False	NA	NA	False	AATAAA	-19	NA	117212851	117182513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203809_117212743
ES.3800.29	chr10	-	4588	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	1936	2	-1936	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTATAATATTTTATAG	4476	False	NA	NA	False	AATAAA	-19	NA	117212873	117182513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.3	chr10	-	6725	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	10	-209	10	209	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTGTGCCAGCCGTG	4484	False	NA	NA	False	ATTAAA	-20	NA	117212865	117180368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.32	chr10	-	3988	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	0	1822	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCAAAGCCCTTCTGT	4471	False	NA	69	True	AGTAAA	-23	NA	117212878	117183121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.33	chr10	-	4006	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-26	2546	-23	1820	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCAAAGCCCTTCT	4448	False	NA	67	True	AGTAAA	-21	NA	117212901	117183123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.34	chr10	-	4023	11	NNC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	18	1819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	252.729420527172	746	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTCAAAGCCCTTC	4534	False	NA	66	True	AGTAAA	-20	NA	117212815	117183124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117209778_117209880_117212743
ES.3800.35	chr10	-	3987	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-17	1817	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	185.108843523526	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTGTCAAAGCCCT	4498	False	NA	64	True	AGTAAA	-18	NA	117212851	117183126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.38	chr10	-	4147	12	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	15	1817	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	272.488986812099	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTGTCAAAGCCCT	4489	False	NA	64	True	AGTAAA	-18	NA	117212860	117183126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.40	chr10	-	4022	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-39	-1756	2	1753	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	4476	False	NA	0	True	AATAAA	-20	NA	117212873	117183190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.41	chr10	-	3962	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-19	1753	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	229.157173136692	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	4496	False	NA	0	True	AATAAA	-20	NA	117212853	117183190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.42	chr10	-	4022	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-81	1753	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	236.356425764141	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	8488	False	NA	0	True	AATAAA	-20	NA	117216001	117183190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.43	chr10	-	4041	12	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-30	1752	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	278.561713268664	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCAGTGTCTCCTACC	8539	False	NA	-1	True	AATAAA	-19	NA	117215950	117183191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.44	chr10	-	4625	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	13	1751	intron_retention	FALSE	canonical	3	24	junction_2	255.55782607687	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGCAGTGTCTCCTAC	4487	False	NA	-2	True	AATAAA	-18	NA	117212862	117183192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.47	chr10	-	5338	8	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	10	1748	intron_retention	FALSE	canonical	3	530	junction_2	35.3062404150442	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTTGCAGTGTCTCC	4484	False	NA	-5	True	AATAAA	-15	NA	117212865	117183195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.49	chr10	-	3759	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	2765	2	1601	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGCTCTCCTTATGT	4476	False	NA	NA	False	TTTAAA	-18	NA	117212873	117183342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.5	chr10	-	6536	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	2	-12	2	12	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTCTTTTTGTTTGA	4476	False	NA	0	True	AATAAA	-25	NA	117212873	117180565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.50	chr10	-	4756	9	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-12	1598	intron_retention	FALSE	canonical	3	78	junction_5	176.276372140454	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTTTGCTCTCCTTA	4503	False	NA	NA	False	TTTAAA	-15	NA	117212846	117183345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.51	chr10	-	3745	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-20	1532	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	243.192022895489	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTGTACTAATTTTAA	4495	False	NA	NA	False	AATACA	-21	NA	117212854	117183411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.53	chr10	-	3698	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-17	1528	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	185.108843523526	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATTTTGTACTAATT	4498	False	NA	NA	False	AATACA	-17	NA	117212851	117183415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.54	chr10	-	2846	6	NNC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	22	1528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	235.424212858406	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATTTTGTACTAATT	4538	False	NA	NA	False	AATACA	-17	NA	117212811	117183415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197131_117212752
ES.3800.55	chr10	-	3801	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-43	-1531	1	1528	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGATTTTGTACTAATT	4472	False	NA	NA	False	AATACA	-17	NA	117212877	117183415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.58	chr10	-	3544	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	7	2975	7	1391	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTGTGGACATACATG	4481	False	NA	NA	False	NA	NA	NA	117212868	117183552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.59	chr10	-	3627	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-7	-1393	-7	1390	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGTGGACATACAT	4508	False	NA	NA	False	NA	NA	NA	117212841	117183553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.6	chr10	-	6599	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	4	6	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	229.157173136692	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTTCTTTTT	4478	False	NA	-6	True	AATAAA	-19	NA	117212871	117180571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.61	chr10	-	3063	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	43	3420	1	946	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCTAATTTGTGTTAA	4517	False	NA	NA	False	GATAAA	-4	NA	117212832	117183997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.62	chr10	-	2996	10	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	0	833	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTAGCATGTGTTATGC	4474	False	NA	NA	False	AATAAA	-19	NA	117212875	117184110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.63	chr10	-	3060	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	3	832	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	229.157173136692	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTAGCATGTGTTATG	4477	False	NA	NA	False	AATAAA	-18	NA	117212872	117184111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.66	chr10	-	3782	9	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-3	829	intron_retention	FALSE	canonical	3	507	junction_5	45.4855746363614	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGGCTAGCATGTGTT	4468	False	NA	NA	False	AATAAA	-15	NA	117212881	117184114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.67	chr10	-	3065	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-10	-828	-10	825	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACCTGGCTAGCATG	4505	False	NA	NA	False	AATAAA	-11	NA	117212844	117184118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.69	chr10	-	3088	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-75	825	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	236.356425764141	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACCTGGCTAGCATG	8494	False	NA	NA	False	AATAAA	-11	NA	117215995	117184118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.70	chr10	-	1914	11	NNC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-7	825	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	235.847429496274	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACCTGGCTAGCATG	4508	False	NA	NA	False	AATAAA	-11	NA	117212841	117184118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117184145_117185215_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.72	chr10	-	2835	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	16	3675	16	691	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTGTGTGTGTATTCCT	4490	False	NA	-2	True	AATGAA	-32	NA	117212859	117184252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.73	chr10	-	4668	5	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	12983	-691	-713	688	intron_retention	FALSE	canonical	3	530	junction_2	34.4419801985891	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAATTGTGTGTGTATT	NA	False	NA	-5	True	AATGAA	-29	NA	117199851	117184255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760
ES.3800.74	chr10	-	9361	10	NNC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	-26	679	intron_retention	FALSE	non_canonical	0	0	junction_2	279.893630589273	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGCTCAAGGAATTGT	8543	False	NA	-14	True	AATGAA	-20	NA	117215946	117184264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117192033_117194897_117195052_117196346_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.75	chr10	-	2727	11	NNC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-17	669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.843102139512	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGTCTTCATGGCTC	4498	False	NA	-24	True	AATGAA	-10	NA	117212851	117184274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192030_117194897_117194945_117195022_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.76	chr10	-	2677	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-30	3879	-27	487	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTTTCATGCAGTAA	4444	False	NA	NA	False	AATAAA	-36	NA	117212905	117184456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.77	chr10	-	3141	9	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-3	188	intron_retention	FALSE	canonical	3	507	junction_5	45.4855746363614	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCCTTGATTTTGATAT	4468	False	NA	1	True	ATTAAA	-20	NA	117212881	117184755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.78	chr10	-	2310	10	NNC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	-7	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	218.063191656812	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCTTGATTTTGATA	4508	False	NA	0	True	ATTAAA	-19	NA	117212841	117184756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185367_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.79	chr10	-	2393	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-46	4179	-43	187	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCTTGATTTTGATA	4428	False	NA	0	True	ATTAAA	-19	NA	117212921	117184756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.81	chr10	-	2405	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-30	187	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	236.356425764141	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCTTGATTTTGATA	8539	False	NA	0	True	ATTAAA	-19	NA	117215950	117184756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
ES.3800.82	chr10	-	3764	8	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	-18	187	intron_retention	FALSE	canonical	3	530	junction_2	35.3062404150442	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCTTGATTTTGATA	4497	False	NA	0	True	ATTAAA	-19	NA	117212852	117184756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.83	chr10	-	930	4	NNC	ENSMUSG00000055531.13	novel	717	6	NA	NA	4	186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	239.143378657147	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGCCCTTGATTTTGAT	4520	False	NA	-1	True	ATTAAA	-18	NA	117212829	117184757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192033_117194897_117194955_117212764
ES.3800.84	chr10	-	2413	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	2	-188	1	185	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGCCCTTGATTTTGA	4517	False	NA	-2	True	ATTAAA	-17	NA	117212832	117184758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.85	chr10	-	8540	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	17	9	intron_retention	FALSE	canonical	3	24	junction_1	212.086984251483	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCACGTTATTTGATG	4491	False	NA	0	True	AATAAA	-25	NA	117212858	117184934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.86	chr10	-	2186	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-20	4360	-17	6	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTTCACGTTATTTG	4454	False	NA	-3	True	AATAAA	-22	NA	117212895	117184937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.88	chr10	-	2299	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	255.804534752611	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAAGCTGTTCACGT	4480	False	NA	-9	True	AATAAA	-16	NA	117212869	117184943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.9	chr10	-	10647	1	Genic_Genomic	ENSMUSG00000055531.13	novel	NA	NA	NA	NA	741	4	mono-exon	FALSE	NA	NA	NA	NA	NA	756	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGCAGTTTGTTCTTT	NA	False	NA	-8	True	AATAAA	-17	NA	117191220	117180573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117180600_117191200
ES.3800.90	chr10	-	5350	11	NNC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	17	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	237.062460123909	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTAAAGCTGTTCAC	4533	False	NA	-11	True	AATAAA	-14	NA	117212816	117184945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117188553_117191686_117191758_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.91	chr10	-	2019	11	NNC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	208.414226961597	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	4497	False	NA	-12	True	AATAAA	-13	NA	117212852	117184946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117196857_117196974_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.92	chr10	-	2153	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	185.108843523526	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGATGTGTAAAGCTGTTC	4511	False	NA	-13	True	AATAAA	-12	NA	117212838	117184947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117185407_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.93	chr10	-	1869	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	21	4636	-20	65	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTAGCTCTACTTTTA	4495	False	NA	-15	True	AATAAA	-20	NA	117212854	117185213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.95	chr10	-	2004	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-44	267	0	65	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTAGCTCTACTTTTA	4471	False	NA	-15	True	AATAAA	-20	NA	117212878	117185213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.96	chr10	-	5020	10	NNC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	4	61	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	191.528420351835	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAACCAGTAGCTCTACT	4520	False	NA	-19	True	AATAAA	-16	NA	117212829	117185217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117188553_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.97	chr10	-	5599	10	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	2	-1860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.140445032492	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTGTATGGTAAA	4476	False	NA	3	True	AATAAA	-23	NA	117212873	117187138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117191009_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.98	chr10	-	7740	8	NIC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	8	-1863	intron_retention	FALSE	canonical	3	24	junction_1	234.798915270588	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTATGTCTGTATGGT	4524	False	NA	0	True	AATAAA	-20	NA	117212825	117187141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117191758_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117199026_117201985_117202090_117203683_117203894_117212743
ES.3800.99	chr10	-	3222	11	NNC	ENSMUSG00000055531.13	novel	3819	9	NA	NA	-12	-1865	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	259.296374830039	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTTATGTCTGTATG	4503	False	NA	-2	True	AATAAA	-18	NA	117212846	117187143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117188553_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ES.38000.1	chrX	-	176	1	Intergenic	novelGene_31144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCATGTGTATGCATGG	NA	False	NA	NA	False	NA	NA	NA	161631084	161630908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161630900_161631100
ES.38001.1	chrX	-	163	1	Intergenic	novelGene_31145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAAGTGCTTGTTTCG	NA	False	NA	0	True	NA	NA	NA	161633755	161633592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161633600_161633800
ES.38002.1	chrX	+	174	1	Intergenic	novelGene_31146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAACAATATA	NA	False	NA	NA	False	NA	NA	NA	161634344	161634518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161634300_161634500
ES.38003.1	chrX	-	188	1	Intergenic	novelGene_31147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161635479	161635291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161635300_161635500
ES.38004.1	chrX	+	185	1	Antisense	novelGene_ENSMUSG00000092752.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATATTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	161657968	161658153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_161658000_161658200
ES.38005.1	chrX	-	2322	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-23	-212	-23	212	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTACGTATTTATATTC	NA	False	NA	0	True	AATAAA	-24	NA	161671466	161639840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ES.38005.3	chrX	-	6135	4	FSM	ENSMUSG00000031357.4	ENSMUST00000134629.2	720	4	-4354	-1061	-4354	209	multi-exon	FALSE	canonical	3	113	junction_1	18.3847763108502	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGTACGTATTTATA	NA	False	NA	-3	True	AATAAA	-21	NA	161650822	161639843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055
ES.38005.4	chrX	-	3872	9	NNC	ENSMUSG00000031357.4	novel	2087	9	NA	NA	13	207	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	45.3755165259857	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAATTGTACGTATTTA	NA	False	NA	-5	True	AATAAA	-19	NA	161671430	161639845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161653919_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ES.38005.5	chrX	-	1928	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	-10	169	-10	-169	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTTCTCATTTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	161671453	161640221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ES.38005.6	chrX	-	181	1	Intergenic	novelGene_31148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161645269	161645088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161645100_161645300
ES.38006.1	chrX	+	155	1	Intergenic	novelGene_31149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161673053	161673208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161673100_161673200
ES.38007.1	chrX	-	1303	1	Intergenic	novelGene_31150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCATATCCAGGAATCC	NA	False	NA	NA	False	NA	NA	NA	161677656	161676353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161676400_161677700
ES.38007.2	chrX	-	234	1	Intergenic	novelGene_31151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAGAAAGTAGGGAAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	161677661	161677427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161677400_161677700
ES.38008.1	chrX	+	2128	19	NIC	ENSMUSG00000031360.15	novel	1665	15	NA	NA	83	13	combination_of_known_junctions	TRUE	canonical	2	23	junction_1	48.2283982220199	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTGGTTTTGTGTTTT	NA	False	NA	24	True	ATTAAA	-30	NA	161684323	161814328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161684391_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.10	chrX	+	2186	19	NNC	ENSMUSG00000031360.15	novel	3289	19	NA	NA	-21	13	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	50.5288390945895	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTGGTTTTGTGTTTT	NA	False	NA	24	True	ATTAAA	-30	NA	161684579	161814328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684705_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.11	chrX	+	2171	18	NIC	ENSMUSG00000031360.15	novel	3099	19	NA	NA	-4	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.0824693852794	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGTTTTGTGTTTTC	NA	False	NA	25	True	ATTAAA	-31	NA	161684596	161814329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161684911_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.12	chrX	+	2092	18	NIC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	1	16	junction_3	51.4517948883402	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCGGGCCCGGCAGAAA	NA	False	NA	9	True	ATTAAA	-15	NA	161684596	161814313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161684744_161686429_161686635_161693004_161693176_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.13	chrX	+	2323	18	NNC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	-4	-17554	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	53.6018901696366	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161684596	161796761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161796315
ES.38008.14	chrX	+	2177	19	NNC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.0890237661651	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCCCGGGCCCGGCAG	NA	False	NA	6	True	ATTAAA	-12	NA	161684598	161814310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696294_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.16	chrX	+	6010	7	ISM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-26	104929	1	5175	intron_retention	FALSE	canonical	2	133	junction_1	36.0343200604954	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161684601	161710575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385
ES.38008.17	chrX	+	7046	18	NIC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	1	15	intron_retention	FALSE	canonical	2	133	junction_1	29.7263179562951	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTTTGTGTTTTCT	NA	False	NA	26	True	ATTAAA	-32	NA	161684601	161814330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.18	chrX	+	3374	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-26	5	1	2	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACATGGGCAGACTTG	NA	False	NA	NA	False	AATAAA	-17	NA	161684601	161815499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.19	chrX	+	808	6	NNC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	2	-4824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	80.5108688314814	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGGTCAGTCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	161684602	161699380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684744_161686429_161686635_161692294_161692370_161693004_161693176_161696203_161696305_161699265
ES.38008.2	chrX	+	2277	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-97	1173	-70	16	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTTTGTGTTTTCTC	NA	False	NA	27	True	ATTAAA	-33	NA	161684530	161814331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.21	chrX	+	5403	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-22	-2028	5	2028	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACCTTGGAGTCAGATT	NA	False	NA	NA	False	ATTAAA	-10	NA	161684605	161817532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.22	chrX	+	3453	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-178	-176	60	0	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTACATGGGCAGACT	NA	False	NA	NA	False	AATAAA	-15	NA	161684687	161815497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.24	chrX	+	178	1	Intergenic	novelGene_31152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGAAGTTTTCTAG	NA	False	NA	NA	False	NA	NA	NA	161702542	161702720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_161702500_161702700
ES.38008.25	chrX	+	1148	11	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	29754	998	1961	8	3prime_fragment	FALSE	canonical	3	150	junction_3	27.6450718935582	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGAAAGTGGTTTTGT	NA	False	NA	19	True	ATTAAA	-25	NA	161714619	161814323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.3	chrX	+	3236	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-68	185	-41	-2	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATGCAGTGTCATTT	NA	False	NA	NA	False	NA	NA	NA	161684559	161815319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.4	chrX	+	5618	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-303	-2216	-38	2033	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGAGTCAGATTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	161684562	161817537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.5	chrX	+	1025	4	ISM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-59	118827	-32	-7527	5prime_fragment	FALSE	canonical	3	133	junction_1	24.1430919496424	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTCTGCCAGGTGCT	NA	False	NA	NA	False	NA	NA	NA	161684568	161696677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203
ES.38008.6	chrX	+	2015	18	NNC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	-26	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.0255456447618	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCGGCAGAAAGTGGTTT	NA	False	NA	16	True	ATTAAA	-22	NA	161684574	161814320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684744_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705465_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.7	chrX	+	2508	18	NNC	ENSMUSG00000031360.15	novel	3099	19	NA	NA	-22	-17554	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_17	62.0623639915646	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161684578	161796761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161796315
ES.38008.8	chrX	+	2398	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-287	988	-22	18	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTGTGTTTTCTCCA	NA	False	NA	29	True	ATTAAA	-35	NA	161684578	161814333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38008.9	chrX	+	3196	18	NIC	ENSMUSG00000031360.15	novel	3353	19	NA	NA	-22	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	53.6755600245087	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGGGCAGACTTGTACT	NA	False	NA	NA	False	AATAAA	-21	NA	161684578	161815503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_161684744_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ES.38009.1	chrX	-	177	1	Intergenic	novelGene_31153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161711497	161711320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161711300_161711500
ES.3801.1	chr10	+	175	1	Intergenic	novelGene_2888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAAAGTCATTGTG	6450	False	NA	NA	False	NA	NA	NA	117230707	117230882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117230700_117230900
ES.38010.1	chrX	-	175	1	Intergenic	novelGene_31154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATACAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	161718139	161717964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_161718000_161718100
ES.38011.1	chrX	-	224	1	Intergenic	novelGene_31155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATAAGGAATGTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	162182764	162182540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_162182500_162182800
ES.38012.1	chrX	+	144	1	Intergenic	novelGene_31156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAACCGTTAAG	NA	False	NA	NA	False	NA	NA	NA	162540952	162541096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_162541000_162541100
ES.38013.1	chrX	-	4113	1	Intergenic	novelGene_31157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	162646523	162642410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_162642400_162646500
ES.38014.1	chrX	+	2599	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	-390	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	59.8351903147303	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGAATGACTTCTT	NA	False	NA	3	True	AATAAA	-18	NA	162691622	162712547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162711021
ES.38014.10	chrX	+	3402	6	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	24	9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	72.8203268325541	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAATGACTTCTTTCTT	NA	False	NA	7	True	AATAAA	-22	NA	162692164	162712551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694324_162694504_162696902_162697121_162699470_162699580_162700701_162700840_162709898
ES.38014.11	chrX	+	960	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	60	765	57	-762	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAATGCAAGTTTATTG	NA	False	NA	NA	False	AATAAA	-25	NA	162692197	162715590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ES.38014.12	chrX	+	3192	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	83	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.8183170994301	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTCTCATGTGAATG	NA	False	NA	-4	True	AATAAA	-11	NA	162692223	162712540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692348_162694324_162694504_162699470_162699580_162700701_162700840_162709898
ES.38014.13	chrX	+	5967	1	Genic_Genomic	ENSMUSG00000031367.16	novel	NA	NA	NA	NA	12184	5	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGAATGACTTCTT	NA	False	NA	3	True	AATAAA	-18	NA	162706580	162712547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_162706600_162712500
ES.38014.14	chrX	+	4258	1	Genic_Genomic	ENSMUSG00000031367.16	novel	NA	NA	NA	NA	14820	932	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATCATGAAAACATCTAG	NA	False	NA	NA	False	NA	NA	NA	162709216	162713474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_162709200_162713500
ES.38014.15	chrX	+	3836	1	NIC	ENSMUSG00000031367.16	novel	2226	6	NA	NA	18123	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGGTGTGCTTTTC	NA	False	NA	2	True	AATAAA	-9	NA	162712519	162716355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_162712500_162716400
ES.38014.2	chrX	+	3379	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	-168	-12	-40	12	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGACTTCTTTCTTCTC	NA	False	NA	10	True	AATAAA	-25	NA	162691972	162712554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
ES.38014.4	chrX	+	3347	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.5751455124208	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTCTCATGTGAATG	NA	False	NA	-4	True	AATAAA	-11	NA	162691983	162712540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709905
ES.38014.5	chrX	+	2294	6	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.2839945590867	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTCTCATGTGAATG	NA	False	NA	-4	True	AATAAA	-11	NA	162692014	162712540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898_162709993_162711021
ES.38014.6	chrX	+	1811	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	-20	-6	-20	6	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGCTTTTCTCTTTC	NA	False	NA	8	True	AATAAA	-15	NA	162692117	162716361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ES.38014.8	chrX	+	3401	6	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.1067671104219	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGAATGACTTCTT	NA	False	NA	3	True	AATAAA	-18	NA	162692138	162712547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694347_162694504_162696902_162697121_162699470_162699580_162700701_162700840_162709898
ES.38014.9	chrX	+	3197	6	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	13	762	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	60.2839945590867	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATTCACCATTTTAA	NA	False	NA	NA	False	AAGAAA	-7	NA	162692153	162713304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898_162712540_162713290
ES.38015.1	chrX	-	728	1	Intergenic	novelGene_31158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATGATAGACTTGTT	NA	False	NA	NA	False	AATAAA	-6	NA	162691845	162691117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_162691100_162691800
ES.38016.1	chrX	-	5026	9	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-5	-829	intron_retention	FALSE	canonical	3	144	junction_2	285.800383790855	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	-6	True	AATAAA	-17	NA	162741662	162719267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.11	chrX	-	1825	9	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-16	-832	intron_retention	FALSE	canonical	0	0	junction_1	311.753082382516	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741673	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162719962_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.12	chrX	-	1984	11	NNC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-27	-832	intron_retention	FALSE	canonical	0	0	junction_2	300.917330840216	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741684	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162719962_162722301_162722412_162723132_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.14	chrX	-	1777	12	NNC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-27	-833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	294.599966897262	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTCTGTCTTTTTA	NA	False	NA	-10	True	AATAAA	-13	NA	162741621	162719271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726088_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.16	chrX	-	2925	10	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-57	2207	15	1415	5prime_fragment	FALSE	canonical	3	131	junction_1	287.051077314917	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAAGATTAAGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	162741642	162720645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.17	chrX	-	1390	11	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	8	-20	combination_of_known_junctions	FALSE	canonical	3	79	junction_10	289.951737363307	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACAGAATTGCA	NA	False	NA	NA	False	NA	NA	NA	162741649	162722080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ES.38016.18	chrX	-	1387	9	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-108	4499	-36	26	5prime_fragment	FALSE	canonical	3	144	junction_2	285.800383790855	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTCTGAAGTTTTGAT	NA	False	NA	NA	False	CATAAA	-43	NA	162741693	162722937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.19	chrX	-	1228	10	NNC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_9	301.003916959051	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATACTCTTTTATTT	NA	False	NA	NA	False	CATAAA	-14	NA	162741672	162722966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741475_162741583
ES.38016.2	chrX	-	2002	11	FSM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-98	831	-26	-831	multi-exon	FALSE	canonical	3	107	junction_1	287.175643117588	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCTGTCTTTTTATA	NA	False	NA	-8	True	AATAAA	-15	NA	162741683	162719269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.20	chrX	-	1150	10	NNC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	303.175050278071	348	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATACTCTTTTATTT	NA	False	NA	NA	False	CATAAA	-14	NA	162741658	162722966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162723166_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.23	chrX	-	3851	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-36	53	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCTTTTCTGTGTGTG	NA	False	NA	NA	False	TTTAAA	-43	NA	162741693	162733328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.26	chrX	-	3823	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-111	-3252	-2	-2	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTTAAAAACTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	162741659	162733383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ES.38016.28	chrX	-	2730	5	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-3	-1313	intron_retention	FALSE	canonical	3	185	junction_4	249.257898570938	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGATAGACTATGACAAG	NA	False	NA	NA	False	NA	NA	NA	162741660	162734694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162741416_162741583
ES.38016.29	chrX	-	1550	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-5	988	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATTTTTTCTCTTTAC	NA	False	NA	0	True	AATATA	-25	NA	162741662	162735598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.3	chrX	-	5269	10	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-12	-831	intron_retention	FALSE	canonical	3	107	junction_1	294.397983755844	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCTGTCTTTTTATA	NA	False	NA	-8	True	AATAAA	-15	NA	162741606	162719269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.31	chrX	-	692	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-7	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	368.435828876617	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTGAAGATATTT	NA	False	NA	-11	True	AATATA	-14	NA	162741601	162735609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162735730_162736533_162736653_162737369_162737479_162739467_162739550_162740915_162740992_162741415
ES.38016.33	chrX	-	5048	3	NIC	ENSMUSG00000031370.13	novel	3867	5	NA	NA	5	977	intron_retention	FALSE	canonical	3	635	junction_1	37	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTGAAGATATTT	NA	False	NA	-11	True	AATATA	-14	NA	162741652	162735609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162740992_162741269
ES.38016.35	chrX	-	1501	5	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-12	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	376.18969616405	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTGAAGATATTT	NA	False	NA	-11	True	AATATA	-14	NA	162741606	162735609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740915_162740992_162741415
ES.38016.37	chrX	-	1701	5	NNC	ENSMUSG00000031370.13	novel	3867	5	NA	NA	-5	975	intron_retention	FALSE	canonical	0	0	junction_3	326.42227252441	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGCCTTGAAGATAT	NA	False	NA	-13	True	AATATA	-12	NA	162741662	162735611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740915_162740992_162741269
ES.38016.39	chrX	-	1534	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-1	975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	298.80789815532	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGCCTTGAAGATAT	NA	False	NA	-13	True	AATATA	-12	NA	162741658	162735611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741431_162741597
ES.38016.4	chrX	-	5913	11	NNC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	29	-832	intron_retention	FALSE	canonical	2	12	junction_4	300.468983424246	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741628	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162728288_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.40	chrX	-	3935	3	NNC	ENSMUSG00000031370.13	novel	504	4	NA	NA	28	975	intron_retention	FALSE	canonical	0	0	junction_2	317.5	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGCCTTGAAGATAT	NA	False	NA	-13	True	AATATA	-12	NA	162741629	162735611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162739550_162740915
ES.38016.41	chrX	-	1480	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-2	927	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	347.253797675418	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCCTCAACTGTG	NA	False	NA	-61	True	TTTAAA	-16	NA	162741596	162735659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740915_162740992_162741269_162741416_162741522
ES.38016.42	chrX	-	1428	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-1	870	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTCTATATCGTGTAC	NA	False	NA	-118	True	AAAAAG	-14	NA	162741658	162735716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.43	chrX	-	1242	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-3	681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	298.80789815532	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTGTCAGAGCAAT	NA	False	NA	0	True	ATTAAA	-43	NA	162741660	162735905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741431_162741597
ES.38016.44	chrX	-	1261	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-23	681	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTGTCAGAGCAAT	NA	False	NA	0	True	ATTAAA	-43	NA	162741680	162735905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.45	chrX	-	1293	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-104	-729	5	680	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTGTTGTCAGAGCAA	NA	False	NA	-1	True	ATTAAA	-42	NA	162741652	162735906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ES.38016.5	chrX	-	1808	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-1	-832	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	279.519747524568	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741658	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.50	chrX	-	1214	5	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	28	663	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	320.417208495424	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATCCTGTCTAA	NA	False	NA	-18	True	ATTAAA	-25	NA	162741629	162735923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741415
ES.38016.51	chrX	-	1283	6	NNC	ENSMUSG00000031370.13	novel	460	6	NA	NA	-4	663	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	291.427246495588	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATCCTGTCTAA	NA	False	NA	-18	True	ATTAAA	-25	NA	162741661	162735923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741475_162741583
ES.38016.52	chrX	-	1662	4	FSM	ENSMUSG00000031370.13	ENSMUST00000139166.2	504	4	-495	-663	4	663	multi-exon	FALSE	canonical	3	635	junction_1	90.1566537878499	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATCCTGTCTAA	NA	False	NA	-18	True	ATTAAA	-25	NA	162741653	162735923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911
ES.38016.53	chrX	-	1193	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-39	2713	24	492	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTAGTTTCCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	162741633	162736094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ES.38016.7	chrX	-	8732	2	FSM	ENSMUSG00000031370.13	ENSMUST00000145962.2	584	2	-4455	-3693	2285	-832	multi-exon	FALSE	canonical	3	180	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162730927	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162723171_162726095
ES.38016.8	chrX	-	7764	11	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-11	-832	intron_retention	FALSE	canonical	3	107	junction_1	284.045489314652	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741668	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
ES.38016.9	chrX	-	1870	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	-2	-832	combination_of_known_junctions	FALSE	canonical	3	79	junction_11	287.202321637063	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	False	NA	-9	True	AATAAA	-14	NA	162741659	162719270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ES.38017.1	chrX	+	2185	1	Intergenic	novelGene_31159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGAGATCAGTGATCTT	NA	False	NA	NA	False	NA	NA	NA	162745359	162747544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_162745400_162747500
ES.38018.1	chrX	+	172	1	Intergenic	novelGene_31160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTTTTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	162772226	162772398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_162772200_162772400
ES.38019.1	chrX	-	86	1	Intergenic	novelGene_31161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	162831507	162831421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_162831400_162831500
ES.3802.1	chr10	-	170	1	Intergenic	novelGene_2889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATTAATAATAATAG	5140	False	NA	NA	False	NA	NA	NA	117233741	117233571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117233600_117233700
ES.38020.1	chrX	+	589	1	Antisense	novelGene_ENSMUSG00000040749.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	AAAACA	-19	NA	162859251	162859840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_162859300_162859800
ES.38021.1	chrX	-	2661	5	NNC	ENSMUSG00000040749.12	novel	1712	4	NA	NA	-3	771	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.071255481123	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAATAACCTTGAGAA	NA	False	NA	NA	False	ATTAAA	-33	NA	162859492	162852929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162853276_162853443_162855224_162856285_162856347_162858573_162858666_162859110
ES.38021.10	chrX	-	1696	4	NNC	ENSMUSG00000040749.12	novel	1712	4	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	214.324261083268	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGTTTTTCTCACTTT	NA	False	NA	-17	True	AATAAA	-16	NA	162859131	162853699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162855224_162856285_162856341_162858569_162858666_162859110
ES.38021.12	chrX	-	2271	4	NNC	ENSMUSG00000040749.12	novel	1712	4	NA	NA	-65	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.661004360277	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGTTTTTCTCACTTT	NA	False	NA	-17	True	AATAAA	-16	NA	162859554	162853699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162855224_162856135_162856347_162858573_162858666_162859110
ES.38021.13	chrX	-	2837	3	NIC	ENSMUSG00000040749.12	novel	1783	4	NA	NA	9	1	intron_retention	FALSE	canonical	3	101	junction_2	225.5	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGTTTTTCTCACTTT	NA	False	NA	-17	True	AATAAA	-16	NA	162859108	162853699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_162856347_162858573_162858666_162859010
ES.38021.14	chrX	-	1810	4	NNC	ENSMUSG00000040749.12	novel	1783	4	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	251.772825292079	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGGTTTTTCTCACT	NA	False	NA	-19	True	AATAAA	-14	NA	162859116	162853701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162855224_162856285_162856347_162858573_162858666_162858981
ES.38021.2	chrX	-	2386	5	NNC	ENSMUSG00000040749.12	novel	1783	4	NA	NA	0	771	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	246.317884044176	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAATAACCTTGAGAA	NA	False	NA	NA	False	ATTAAA	-33	NA	162859117	162852929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162853276_162853443_162855224_162856285_162856347_162858573_162858666_162859010
ES.38021.3	chrX	-	2262	4	NNC	ENSMUSG00000040749.12	novel	1783	4	NA	NA	451	755	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	253.65637298431	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	162858666	162852945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162853296_162853465_162855224_162856285_162856347_162858573
ES.38021.4	chrX	-	2446	5	NNC	ENSMUSG00000040749.12	novel	803	4	NA	NA	57	688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	252.247274514513	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGCAGTTTGCAAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	162859432	162853012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_162853276_162853443_162855224_162856285_162856347_162858573_162858666_162859182
ES.38021.5	chrX	-	1803	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	15	-106	-14	106	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTTATTAGAACTCT	NA	False	NA	88	True	NA	NA	NA	162859131	162853594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
ES.38021.7	chrX	-	2154	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	-437	-5	-94	5	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTTCTCACTTTTGTA	NA	False	NA	-13	True	AATAAA	-20	NA	162859583	162853695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
ES.38021.8	chrX	-	1802	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	-14	-5	-14	5	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTTCTCACTTTTGTA	NA	False	NA	-13	True	AATAAA	-20	NA	162859131	162853695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
ES.38022.1	chrX	-	204	1	Intergenic	novelGene_31162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCTCTCTCTCTCTCT	NA	False	NA	NA	False	TTTAAA	-9	NA	162925699	162925495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_162925500_162925700
ES.38023.1	chrX	+	179	1	Intergenic	novelGene_31163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCTGCTCACAGT	NA	False	NA	NA	False	NA	NA	NA	162984821	162985000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_162984800_162985000
ES.38024.1	chrX	+	2420	4	NNC	ENSMUSG00000031379.14	novel	2915	7	NA	NA	-3	13260	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	132.098448136229	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTGTCTTAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	163052503	163068130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163052674_163054598_163054728_163063124_163063218_163066102
ES.38024.10	chrX	+	1196	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	174	229	32	-229	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGTTTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	163052600	163155778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ES.38024.11	chrX	+	1312	11	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	33	-230	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	108.693330062152	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGATGTTTTTTTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	163052601	163155777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163090199_163090318_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ES.38024.12	chrX	+	2069	7	FSM	ENSMUSG00000031379.14	ENSMUST00000123343.2	2228	7	33	126	33	-126	multi-exon	FALSE	canonical	0	0	junction_6	131.536644661816	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAAAATTGCTTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	163052601	163092647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163090199_163090318_163091281
ES.38024.13	chrX	+	5482	2	NNC	ENSMUSG00000031379.14	novel	898	9	NA	NA	1029	4450	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	163053597	163059320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163054358_163054598
ES.38024.14	chrX	+	1439	9	Fusion	ENSMUSG00000031380.11_ENSMUSG00000031379.14	novel	918	4	NA	NA	-15973	187	multi-exon	FALSE	canonical	0	0	junction_4	113.343986937993	94	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163140400	163183963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_+_163140563_163141143_163141227_163152041_163152109_163155448_163155604_163168799_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658
ES.38024.15	chrX	+	3761	1	Intergenic	novelGene_31164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAGAAAAACCATGAAA	NA	False	NA	NA	False	NA	NA	NA	163147296	163151057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_163147300_163151100
ES.38024.16	chrX	+	1227	6	NNC	ENSMUSG00000031380.11	novel	918	4	NA	NA	8772	217	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	1.72046505340853	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGAACACAGACGTT	NA	False	NA	NA	False	NA	NA	NA	163165145	163183993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163165371_163168799_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658
ES.38024.17	chrX	+	1759	7	NNC	ENSMUSG00000031380.11	novel	918	4	NA	NA	8783	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.65148371670111	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGTCAGCGTTATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	163165156	163185640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163165415_163168799_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ES.38024.18	chrX	+	1179	6	NNC	ENSMUSG00000031380.11	novel	918	4	NA	NA	8865	218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.72021504754765	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAACACAGACGTTT	NA	False	NA	NA	False	NA	NA	NA	163165238	163183994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163165415_163168799_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658
ES.38024.2	chrX	+	1142	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	-17	-229	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	80.2507788124203	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGTTTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	163052525	163155778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163052674_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ES.38024.20	chrX	+	1483	3	ISM	ENSMUSG00000031380.11	ENSMUST00000124851.2	918	4	2295	-220	2295	220	3prime_fragment	FALSE	canonical	3	6	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACACAGACGTTTGG	NA	False	NA	NA	False	NA	NA	NA	163176533	163183996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163177578_163178928_163179030_163183658
ES.38024.21	chrX	+	1464	1	NIC	ENSMUSG00000031380.11	novel	2049	7	NA	NA	8293	219	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACACAGACGTTTG	NA	False	NA	NA	False	NA	NA	NA	163182531	163183995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163182500_163184000
ES.38024.3	chrX	+	1567	11	NNC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.949079123019	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	False	NA	NA	False	TATAAA	-15	NA	163052525	163156007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163125642_163125710_163141143_163141227_163152041_163152109_163155448
ES.38024.4	chrX	+	4363	1	NIC	ENSMUSG00000031379.14	novel	898	9	NA	NA	-17	2018	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACATATTGAGGATAGCT	NA	False	NA	NA	False	NA	NA	NA	163052525	163056888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163052500_163056900
ES.38024.5	chrX	+	1375	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	118	106	2	-106	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTCCTGATACATG	NA	False	NA	NA	False	AATAAA	-21	NA	163052544	163155901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ES.38024.6	chrX	+	1207	9	NIC	ENSMUSG00000031379.14	novel	1599	10	NA	NA	2	-229	combination_of_known_splicesites	FALSE	canonical	3	32	junction_6	81.4048524352203	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGTTTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	163052544	163155778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163141143_163141227_163152041_163152109_163155448
ES.38024.7	chrX	+	6770	1	NIC	ENSMUSG00000031379.14	novel	898	9	NA	NA	-13	4455	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAGAAATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	163052555	163059325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163052600_163059300
ES.38024.8	chrX	+	3212	7	NNC	ENSMUSG00000031379.14	novel	2915	7	NA	NA	-10	-11700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	103.728813097744	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	163052558	163115955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163113456
ES.38024.9	chrX	+	1454	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	146	-1	4	1	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTTTTTTATATGG	NA	False	NA	NA	False	TATAAA	-16	NA	163052572	163156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ES.38025.1	chrX	-	9423	1	Antisense	novelGene_ENSMUSG00000031379.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACACATACATACACAC	NA	False	NA	NA	False	NA	NA	NA	163065501	163056078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_163056100_163065500
ES.38026.1	chrX	+	4127	6	NNC	ENSMUSG00000031381.17	novel	1086	4	NA	NA	-4517	-217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.3870627958355	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGCTTCCTGGATA	NA	False	NA	NA	False	AATAAA	-19	NA	163198265	163216690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199075_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.10	chrX	+	3796	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	-202	0	-202	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202580	163216912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.11	chrX	+	3405	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	-188	-5	-188	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202594	163216912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.12	chrX	+	2996	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	-1	217	-1	-217	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGCTTCCTGGATA	NA	False	NA	NA	False	AATAAA	-19	NA	163202781	163216690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.13	chrX	+	3218	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	21	355	1	-350	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTTCTTTATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	163202803	163216557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.14	chrX	+	8392	4	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	3	-217	intron_retention	FALSE	canonical	3	206	junction_1	29.698484809835	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGCTTCCTGGATA	NA	False	NA	NA	False	AATAAA	-19	NA	163202805	163216690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163211669_163211806_163212014_163214625
ES.38026.15	chrX	+	7464	6	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.2736346601688	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTCAGTTTGTC	NA	False	NA	26	True	AATAAA	-26	NA	163202809	163216910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163207028_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.16	chrX	+	3066	7	NNC	ENSMUSG00000031381.17	novel	3212	6	NA	NA	9	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.79623439249	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGCTTCCTGGATAC	NA	False	NA	NA	False	AATAAA	-20	NA	163202811	163216691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163205983_163208724_163208824_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.17	chrX	+	2833	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	29	350	9	-350	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTTCTTTATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	163202811	163216557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.18	chrX	+	3550	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	11	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.295581947792	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTCAGGCTTCCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	163202813	163216688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163209726_163209938_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.19	chrX	+	3095	6	NNC	ENSMUSG00000031381.17	novel	3212	6	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	108.874239377366	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163202814	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163205983_163210927_163211061_163211624_163211669_163211806_163212014_163214625
ES.38026.2	chrX	+	1352	5	NNC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	-4163	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.329358901454	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGAACTCCTTGC	NA	False	NA	9	True	GATAAA	-16	NA	163198619	163215049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199075_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.20	chrX	+	8128	5	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	12	1	intron_retention	FALSE	canonical	3	206	junction_1	26.2392835268039	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTCAGTTTGTC	NA	False	NA	26	True	AATAAA	-26	NA	163202814	163216910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.21	chrX	+	7907	5	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	13	-217	intron_retention	FALSE	canonical	3	206	junction_1	26.2392835268039	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGCTTCCTGGATA	NA	False	NA	NA	False	AATAAA	-19	NA	163202815	163216690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.22	chrX	+	7773	5	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	13	-351	intron_retention	FALSE	canonical	3	206	junction_1	26.2392835268039	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTGTTCTTTATTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	163202815	163216556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.23	chrX	+	3659	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	110.79623439249	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163202815	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163208724_163208824_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.24	chrX	+	3716	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	33	-537	13	532	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAACGTAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	163202815	163217444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.25	chrX	+	6266	5	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	13	-2	intron_retention	FALSE	canonical	3	206	junction_1	26.2392835268039	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGGAACTCCTTGC	NA	False	NA	9	True	GATAAA	-16	NA	163202815	163215049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.27	chrX	+	3819	8	NNC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.556371576598	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTCTCAGTTTGT	NA	False	NA	25	True	AATAAA	-25	NA	163202815	163216909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163206506_163206669_163208724_163208824_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.28	chrX	+	6014	6	NNC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	93.0096769158994	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTCTTATTTTTGTCT	NA	False	NA	17	True	AATAAA	-17	NA	163202815	163216901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163208824_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.29	chrX	+	3870	6	FSM	ENSMUSG00000031381.17	ENSMUST00000151911.9	3903	6	33	0	13	0	multi-exon	FALSE	canonical	2	5	junction_2	95.333939392013	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202815	163216912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206669_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.3	chrX	+	3929	6	NNC	ENSMUSG00000031381.17	novel	1086	4	NA	NA	-4098	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	97.3870627958355	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163198684	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199075_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.30	chrX	+	3763	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	33	-202	13	202	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTCTCCTGATTCCAA	NA	False	NA	NA	False	AATATA	-39	NA	163202815	163217114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.31	chrX	+	4093	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	33	-532	13	532	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAACGTAAAGTGA	NA	False	NA	NA	False	NA	NA	NA	163202815	163217444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.32	chrX	+	3172	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	87.391837910261	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202815	163216912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625_163214889_163215277
ES.38026.33	chrX	+	3425	5	NIC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	102.024506859872	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTCTCAGTTTGT	NA	False	NA	25	True	AATAAA	-25	NA	163202815	163216909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163206360_163210927_163211061_163211806_163212014_163214625
ES.38026.34	chrX	+	3346	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	89.4445824705629	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTCAGTTT	NA	False	NA	23	True	AATAAA	-23	NA	163202815	163216907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625_163216340_163216549
ES.38026.35	chrX	+	3649	6	FSM	ENSMUSG00000031381.17	ENSMUST00000151911.9	3903	6	33	221	13	-216	multi-exon	FALSE	canonical	2	5	junction_2	95.333939392013	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGCTTCCTGGATAC	NA	False	NA	NA	False	AATAAA	-20	NA	163202815	163216691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202837_163205579_163206669_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.36	chrX	+	3445	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	-66	218	36	-216	multi-exon	FALSE	canonical	2	7	junction_1	94.8113917206155	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGCTTCCTGGATAC	NA	False	NA	NA	False	AATAAA	-20	NA	163202838	163216691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163202965_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.37	chrX	+	3370	6	NNC	ENSMUSG00000031381.17	novel	3597	6	NA	NA	-28	-219	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	96.2816701143058	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTCAGGCTTCCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	163202876	163216688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163202931_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.38	chrX	+	3539	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2673	0	-2	0	3prime_fragment	FALSE	canonical	3	160	junction_1	42.1337157155644	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTCTCAGTTTGT	NA	False	NA	25	True	AATAAA	-25	NA	163205577	163216909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.39	chrX	+	8499	2	NIC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	-2	-219	intron_retention	FALSE	canonical	3	278	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTCAGGCTTCCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	163205577	163216688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163212014_163214625
ES.38026.4	chrX	+	3805	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	-3965	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4445824705629	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGCTTCCTGGATAC	NA	False	NA	NA	False	AATAAA	-20	NA	163198817	163216691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199075_163202607_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.40	chrX	+	7887	4	FSM	ENSMUSG00000031381.17	ENSMUST00000155849.2	3321	4	-2927	-1639	-1	-217	multi-exon	FALSE	canonical	3	227	junction_1	22.7596133534821	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGGCTTCCTGGATA	NA	False	NA	NA	False	AATAAA	-19	NA	163205578	163216690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.41	chrX	+	3163	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	2796	-4	-1	-1	3prime_fragment	FALSE	canonical	3	48	junction_1	87.973007223807	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163205578	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.42	chrX	+	8104	4	FSM	ENSMUSG00000031381.17	ENSMUST00000155849.2	3321	4	-2927	-1856	-1	0	multi-exon	FALSE	canonical	3	227	junction_1	22.7596133534821	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTCAGTTT	NA	False	NA	23	True	AATAAA	-23	NA	163205578	163216907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.43	chrX	+	4075	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2674	-537	-1	534	3prime_fragment	FALSE	canonical	3	160	junction_1	42.1337157155644	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAACGTAAAGTGAAA	NA	False	NA	NA	False	NA	NA	NA	163205578	163217446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.44	chrX	+	3451	5	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.608652581121	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163205578	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163206360_163210927_163211061_163211624_163211669_163211806_163212014_163214625
ES.38026.45	chrX	+	3742	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2674	-204	-1	201	3prime_fragment	FALSE	canonical	3	160	junction_1	42.1337157155644	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTCTCCTGATTCCA	NA	False	NA	NA	False	AATATA	-38	NA	163205578	163217113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.47	chrX	+	3689	1	NIC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	845	-4719	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTCATGTTTACTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	163206424	163210113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163206400_163210100
ES.38026.48	chrX	+	5061	4	NNC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.836867253809	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCTTATTTTTGTCTC	NA	False	NA	18	True	AATAAA	-18	NA	163208527	163216902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163211061_163211624_163211669_163211806_163212014_163214625
ES.38026.49	chrX	+	4878	2	NIC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	562	-350	intron_retention	FALSE	canonical	3	278	junction_1	0	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTTCTTTATTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	163209067	163216557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163212014_163214625
ES.38026.5	chrX	+	2971	6	NNC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	-3821	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.182884677289	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163198961	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199075_163208724_163208824_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.50	chrX	+	3734	2	NNC	ENSMUSG00000031381.17	novel	3321	4	NA	NA	5642	1184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAATGTCTTATTATATC	NA	False	NA	NA	False	NA	NA	NA	163214147	163218096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163217717_163217931
ES.38026.51	chrX	+	2013	1	Genic_Genomic	ENSMUSG00000031381.17	novel	NA	NA	NA	NA	7544	1150	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163216049	163218062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_163216000_163218100
ES.38026.6	chrX	+	3882	7	NNC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	-3725	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4445824705629	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163199057	163216912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199171_163202607_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.7	chrX	+	8921	5	NNC	ENSMUSG00000031381.17	novel	3903	6	NA	NA	-3723	1	intron_retention	FALSE	canonical	0	0	junction_1	106.638114668255	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTCAGTTTGTC	NA	False	NA	26	True	AATAAA	-26	NA	163199059	163216910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199171_163202607_163202837_163205579_163211669_163211806_163212014_163214625
ES.38026.8	chrX	+	3216	6	NNC	ENSMUSG00000031381.17	novel	1086	4	NA	NA	-3666	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.217624502594	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCAGTTTGTCT	NA	False	NA	27	True	AATAAA	-27	NA	163199116	163216911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163199171_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ES.38026.9	chrX	+	3675	5	NIC	ENSMUSG00000031381.17	novel	3594	6	NA	NA	-217	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	106.638114668255	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTCTCAGTTTGT	NA	False	NA	25	True	AATAAA	-25	NA	163202565	163216909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163202837_163205579_163206360_163211535_163211669_163211806_163212014_163214625
ES.38027.1	chrX	+	1218	4	ISM	ENSMUSG00000031382.15	ENSMUST00000033755.6	1369	7	14643	-1	14643	1	3prime_fragment	FALSE	canonical	1	1	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTTTTAATTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	163235696	163242161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_163236046_163237383_163237519_163238792_163238985_163241619
ES.38028.1	chrX	-	204	1	Intergenic	novelGene_31165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTGCATTAT	NA	False	NA	NA	False	NA	NA	NA	163244396	163244192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163244200_163244400
ES.38029.1	chrX	-	176	1	Intergenic	novelGene_31166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	163291568	163291392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163291400_163291600
ES.3803.1	chr10	-	197	1	Intergenic	novelGene_2890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAGCTGTCAAAAATA	1131	False	NA	NA	False	NA	NA	NA	117237750	117237553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117237600_117237800
ES.38030.1	chrX	+	5878	2	Intergenic	novelGene_31167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGAATGTATTTTCT	NA	False	NA	NA	False	AAAAAG	-3	NA	163398230	163429416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_163398638_163423945
ES.38031.1	chrX	-	3821	1	Intergenic	novelGene_31168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	163677761	163673940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163673900_163677800
ES.38032.1	chrX	-	5699	13	NIC	ENSMUSG00000061778.11	novel	2479	15	NA	NA	-8	12	intron_retention	FALSE	canonical	3	42	junction_10	10.4519402770756	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGATAAAGCATTTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	163763301	163719152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.11	chrX	-	9954	14	NNC	ENSMUSG00000061778.11	novel	2015	15	NA	NA	12	-9	intron_retention	FALSE	non_canonical	0	0	junction_2	24.044337743319	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAAATCTTTTGTCTC	NA	False	NA	NA	False	AATAAA	-9	NA	163763306	163719173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_163721689_163722638_163724897_163725491_163726193_163726233_163726557_163727212_163727310_163727968_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.12	chrX	-	3069	15	NNC	ENSMUSG00000061778.11	novel	2479	15	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.148621131634	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAAATCTTTTGTCTC	NA	False	NA	NA	False	AATAAA	-9	NA	163763324	163719173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_163720719_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.13	chrX	-	2254	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	38	-277	0	277	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCTGTTTTCGATACA	NA	False	NA	NA	False	ATTAAA	-17	NA	163763293	163720927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.14	chrX	-	1662	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	30	323	-8	-323	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCCTTCAGGCATTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	163763301	163721527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.2	chrX	-	2660	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	-32	-149	-1	0	multi-exon	FALSE	canonical	1	3	junction_1	17.508598470699	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763325	163719164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.3	chrX	-	4097	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	-42	-2040	-2	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763373	163719164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.4	chrX	-	4742	14	NIC	ENSMUSG00000061778.11	novel	2487	15	NA	NA	12	0	intron_retention	FALSE	canonical	3	42	junction_11	10.3506567267278	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763306	163719164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.5	chrX	-	2451	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112248.9	2487	15	36	0	-4	0	multi-exon	FALSE	canonical	1	2	junction_1	17.7207649441011	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763335	163719164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_163720081_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38032.6	chrX	-	4054	15	NNC	ENSMUSG00000061778.11	novel	2487	15	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	18.2985446058936	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTCTCTAATTGATA	NA	False	NA	NA	False	AATAAA	-18	NA	163763306	163719164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748158_163762989_163763060_163763210
ES.38032.8	chrX	-	2622	15	NNC	ENSMUSG00000061778.11	novel	2479	15	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	22.5203989162479	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTTTTGTCTCTAA	NA	False	NA	NA	False	AATAAA	-12	NA	163763284	163719170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739523_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ES.38033.1	chrX	+	3028	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	-72	-3	-72	0	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTTCTTTTACTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	163763515	163780268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.10	chrX	+	2500	9	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	47.0418696482187	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763692	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775725_163775891_163778339_163778419_163778882_163779118_163779765
ES.38033.11	chrX	+	2928	8	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_5	38.2686529148645	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763699	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775754_163775891_163778339_163779118_163779765
ES.38033.12	chrX	+	3473	9	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	35.6291664230304	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163763700	163780264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163770343_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.13	chrX	+	5033	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	113	-2193	-7	2190	multi-exon	FALSE	canonical	3	98	junction_5	7.72981241687015	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACACCTTCTCTTTCCTCC	NA	False	NA	NA	False	TTTAAA	-39	NA	163763700	163782458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.14	chrX	+	3653	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-6	696	intron_retention	FALSE	canonical	3	98	junction_5	7.51596939312337	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCTTCTTTTGTGTAT	NA	False	NA	NA	False	AGTAAA	-39	NA	163763701	163780964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163779118_163779765
ES.38033.15	chrX	+	5593	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	38.149009669656	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763704	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778419_163778882_163779118_163779765
ES.38033.16	chrX	+	3899	8	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_5	38.2686529148645	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163763704	163780264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163775662_163775754_163775891_163778339_163779118_163779765
ES.38033.17	chrX	+	2858	9	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.6461116627672	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163763708	163780264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775699_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.18	chrX	+	6716	2	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	9193	-1	intron_retention	FALSE	canonical	3	107	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163772900	163780264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163779118_163779765
ES.38033.19	chrX	+	3743	5	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	9510	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.1771925828572	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163773217	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163775662_163775754_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.2	chrX	+	6557	6	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	101	junction_3	7.44043009509531	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763589	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163779118_163779765
ES.38033.3	chrX	+	5996	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-58	-1	intron_retention	FALSE	canonical	3	98	junction_4	7.95907901553378	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCTTGTTTTCTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	163763649	163780264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.4	chrX	+	3850	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-35	-10	intron_retention	FALSE	canonical	3	98	junction_4	7.83503382902976	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTCCTAGAGTCTTGT	NA	False	NA	NA	False	ATTAAA	-7	NA	163763672	163780255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163766450_163769555_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.5	chrX	+	2979	8	NIC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-31	0	intron_retention	FALSE	canonical	3	98	junction_5	7.51596939312337	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763676	163780265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163779118_163779765
ES.38033.6	chrX	+	3554	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	98	-699	-22	696	multi-exon	FALSE	canonical	3	98	junction_5	7.72981241687015	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCTTCTTTTGTGTAT	NA	False	NA	NA	False	AGTAAA	-39	NA	163763685	163780964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38033.7	chrX	+	5027	9	NNC	ENSMUSG00000047757.18	novel	2953	9	NA	NA	-17	2181	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	35.9528771449518	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATCATTTACACCTTCT	NA	False	NA	NA	False	TTTAAA	-30	NA	163763690	163782449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_163763807_163765432_163766450_163769555_163769702_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ES.38034.1	chrX	-	2695	1	Intergenic	novelGene_31169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTTCTCGCTATGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	163786150	163783455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163783500_163786200
ES.38035.1	chrX	-	184	1	Intergenic	novelGene_31170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCCAATCCTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	163837745	163837561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163837600_163837700
ES.38036.1	chrX	-	206	1	Intergenic	novelGene_31171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAAACAAATACATTGA	NA	False	NA	NA	False	NA	NA	NA	163892428	163892222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163892200_163892400
ES.38037.1	chrX	-	175	1	Intergenic	novelGene_31172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATCTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	163926505	163926330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_163926300_163926500
ES.38038.1	chrX	-	169	1	Intergenic	novelGene_31173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAATGCCTTATAA	2372	False	NA	NA	False	NA	NA	NA	164025642	164025473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_164025500_164025600
ES.38039.1	chrX	+	1544	6	NIC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-29	1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	17.9041894538681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTCCTACATTTTTAT	NA	False	NA	NA	False	CATAAA	-19	NA	164953420	164972817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_164953547_164959840_164960076_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.10	chrX	+	4168	6	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-3145	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.9093280618962	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCACGTGTCATTTAT	NA	False	NA	NA	False	CATAAA	-5	NA	164958252	164972803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164959999_164960055_164960094_164960314_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.11	chrX	+	3652	6	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-1954	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.9093280618962	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164959443	164973478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164959999_164960055_164960094_164960314_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.12	chrX	+	3435	5	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-1680	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1009478460092	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164959717	164973478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164960094_164960314_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.13	chrX	+	202	1	Intergenic	novelGene_31174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGAGAAGTTTGCAGT	NA	False	NA	NA	False	NA	NA	NA	164960105	164960307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_164960100_164960300
ES.38039.14	chrX	+	2078	2	ISM	ENSMUSG00000040621.15	ENSMUST00000152248.2	964	3	1548	-1140	1548	-28	3prime_fragment	FALSE	canonical	3	53	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164962966	164973478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_+_164963806_164972239
ES.38039.2	chrX	+	1483	7	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.3189337389853	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATTTATTCCTACATTT	NA	False	NA	NA	False	CATAAA	-15	NA	164953420	164972813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.3	chrX	+	9881	4	NNC	ENSMUSG00000040621.15	novel	1928	5	NA	NA	-29	-28	intron_retention	FALSE	non_canonical	0	0	junction_1	21.7408984788271	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164953420	164973478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164960094_164960314_164961827_164963348_164963806_164972239
ES.38039.4	chrX	+	1990	6	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-18	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6719040271741	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	164953469	164973478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164953547_164959840_164959999_164960055_164960076_164961787_164961827_164963348_164963806_164972239
ES.38039.5	chrX	+	1474	8	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	-6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9940914550836	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACGTGTCATTTATTC	NA	False	NA	NA	False	CATAAA	-7	NA	164953481	164972805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164953547_164959113_164959174_164959840_164959999_164960055_164960076_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.6	chrX	+	1125	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	38	699	0	-7	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTCATTTATTCCTAC	NA	False	NA	NA	False	CATAAA	-11	NA	164953487	164972809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
ES.38039.7	chrX	+	7603	5	NNC	ENSMUSG00000040621.15	novel	1389	5	NA	NA	102	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1009478460092	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTATTCCTACATTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	164953592	164972815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164959999_164961513_164961639_164961787_164961827_164963348_164963806_164972239
ES.38039.8	chrX	+	6516	3	NNC	ENSMUSG00000040621.15	novel	720	3	NA	NA	1130	-2374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	164954620	164961414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164959999_164960055_164960094_164960314
ES.38039.9	chrX	+	3380	2	NNC	ENSMUSG00000040621.15	novel	720	3	NA	NA	-3584	-2374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAGGAAAACTA	NA	False	NA	NA	False	NA	NA	NA	164957813	164961414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_164960094_164960314
ES.3804.1	chr10	+	183	1	Intergenic	novelGene_2891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAATGAGCAAGGCTTA	4887	False	NA	NA	False	NA	NA	NA	117252873	117253056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117252900_117253100
ES.38040.1	chrX	+	214	1	Intergenic	novelGene_31175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGAGGTGAGGGGGAA	NA	False	NA	NA	False	NA	NA	NA	165184566	165184780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_165184600_165184800
ES.38041.1	chrX	+	4887	1	Intergenic	novelGene_31176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTTCTTTAATG	NA	False	NA	NA	False	NA	NA	NA	165201810	165206697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_165201800_165206700
ES.38042.1	chrX	+	180	1	Intergenic	novelGene_31177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	165211920	165212100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_165211900_165212100
ES.38043.1	chrX	+	1437	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	1	93	junction_3	62.5634677747326	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGGTCATTTGATG	NA	False	NA	7	True	AATAAA	-12	NA	165223743	165236134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_165223836_165229786_165229899_165232783_165232928_165233623_165233711_165235132
ES.38043.2	chrX	+	1185	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	-20	-244	at_least_one_novel_splicesite	FALSE	non_canonical	1	93	junction_3	62.5634677747326	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCACTTTACCTTTATG	NA	False	NA	NA	False	AATAAA	-19	NA	165223751	165235890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_165223836_165229786_165229899_165232783_165232928_165233623_165233711_165235132
ES.38043.4	chrX	+	806	5	NNC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	6	566	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	101.671038157383	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACATGACTGAAATGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	165223777	165235539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_165223836_165229786_165229899_165232783_165232929_165233626_165233711_165235132
ES.38043.5	chrX	+	1399	5	NNC	ENSMUSG00000079317.11	novel	1294	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	101.671038157383	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTGGTCATTTGATG	NA	False	NA	7	True	AATAAA	-12	NA	165223778	165236134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_165223836_165229786_165229899_165232783_165232900_165233598_165233711_165235132
ES.38043.6	chrX	+	1279	1	NIC	ENSMUSG00000079317.11	novel	1613	5	NA	NA	6310	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTGCACTTTACCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	165234608	165235887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_165234600_165235900
ES.38044.1	chrX	+	162	1	Intergenic	novelGene_31178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	165272231	165272393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_165272200_165272400
ES.38045.1	chrX	+	826	1	Antisense	novelGene_ENSMUSG00000051224.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAAATGGCTAAACC	NA	False	NA	NA	False	AATAAA	-25	NA	165293196	165294022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_165293200_165294000
ES.38046.1	chrX	-	4487	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	-25	-9	-25	9	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTTTTTTTTTAAC	NA	False	NA	NA	False	AATAAA	-20	NA	165223725	165173019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.10	chrX	-	5430	21	NIC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	31	-903	intron_retention	FALSE	canonical	3	107	junction_14	26.6594729880394	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223669	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.11	chrX	-	3514	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	-17	-903	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	34.2176130278299	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223717	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.12	chrX	-	3281	24	Fusion	ENSMUSG00000040586.9_ENSMUSG00000079316.11	novel	4453	23	NA	NA	-21	-903	multi-exon	FALSE	canonical	1	4	junction_22	93.1607956032424	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165262663	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165245310_165245339_165262535
ES.38046.13	chrX	-	3500	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	7	-910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	39.6607514630216	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165223693	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210265_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.16	chrX	-	3659	24	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	-4	-910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	48.1516193902706	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165223704	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209545_165209658_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.17	chrX	-	3219	21	NIC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	650	-910	intron_retention	FALSE	canonical	3	107	junction_14	26.8242427665722	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165223050	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024
ES.38046.18	chrX	-	3734	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	26	-910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	44.8203254143467	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165223674	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209545_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.19	chrX	-	3379	25	Fusion	ENSMUSG00000040586.9_ENSMUSG00000079316.11	novel	4453	23	NA	NA	-3	-910	multi-exon	FALSE	canonical	0	0	junction_23	91.4811759629026	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165262645	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275_165223399_165245310_165245339_165262535
ES.38046.2	chrX	-	5591	16	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	11452	2	intron_retention	FALSE	canonical	3	33	junction_8	40.6428345468177	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGACTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	165212248	165173026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815
ES.38046.20	chrX	-	2782	7	NIC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	33619	-910	intron_retention	FALSE	canonical	3	148	junction_6	20.869967789998	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTGTGTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	165190081	165173938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992
ES.38046.21	chrX	-	3622	22	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	40	-912	intron_retention	FALSE	canonical	3	33	junction_8	34.966845326807	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAACTTTGTGTATT	NA	False	NA	NA	False	ATTAAA	-5	NA	165223660	165173940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.22	chrX	-	3444	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	56	-912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	39.7639990422833	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAACTTTGTGTATT	NA	False	NA	NA	False	ATTAAA	-5	NA	165223644	165173940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209985_165210199_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.23	chrX	-	5203	22	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	35	-912	intron_retention	FALSE	canonical	0	0	junction_8	40.0762877963693	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAAACTTTGTGTATT	NA	False	NA	NA	False	ATTAAA	-5	NA	165223665	165173940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191624_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.25	chrX	-	3737	21	ISM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	3	2004	3	-2004	5prime_fragment	FALSE	canonical	3	107	junction_12	23.1667865704331	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAGTGTACTATTTC	NA	False	NA	NA	False	TTTAAA	-38	NA	165223697	165175032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.26	chrX	-	6554	20	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	24	-6995	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6896809039639	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATGGAAATATTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	165223676	165180023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165183551_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.27	chrX	-	3911	15	ISM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	7	16708	7	-16708	5prime_fragment	FALSE	canonical	3	107	junction_6	11.6180717779128	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATGGATTCAGAAACT	NA	False	NA	NA	False	AGTAAA	-13	NA	165223693	165189736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.28	chrX	-	5434	7	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	27	-33907	intron_retention	FALSE	canonical	0	0	junction_1	51.6034559566185	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAGGAACTCTGTTCTAA	NA	False	NA	NA	False	NA	NA	NA	165223673	165206935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165207446_165207505_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.29	chrX	-	4631	1	Antisense	novelGene_ENSMUSG00000079317.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTCAAGTTTTTAAAT	NA	False	NA	NA	False	AATAAA	-30	NA	165240074	165235443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_165235400_165240100
ES.38046.3	chrX	-	4390	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	25	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.1878291107484	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGACTTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	165223675	165173026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191624_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.30	chrX	-	1295	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	170	-18	-51	18	multi-exon	FALSE	canonical	3	555	junction_2	7.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTACCTCATCTTT	NA	False	NA	10	True	ATTAAA	-42	NA	165262693	165240230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165241340_165245310_165245339_165262535
ES.38046.31	chrX	-	5236	2	NIC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	555	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGCAATGCTTTTTA	NA	False	NA	-9	True	ATTAAA	-23	NA	165262682	165240249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165245339_165262535
ES.38046.32	chrX	-	5396	2	ISM	ENSMUSG00000079316.11	ENSMUST00000149315.2	392	3	8809	-875	8809	-7	3prime_fragment	FALSE	canonical	3	570	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTACGTTGCAATGC	NA	False	NA	-15	True	ATTAAA	-17	NA	165249622	165240255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165241340_165245310
ES.38046.33	chrX	-	3014	7	Fusion	ENSMUSG00000051224.14_ENSMUSG00000079316.11	novel	4050	5	NA	NA	25	-7	intron_retention	FALSE	canonical	0	0	junction_2	199.666110182864	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTACGTTGCAATGC	NA	False	NA	-15	True	ATTAAA	-17	NA	165293449	165240255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chrX_-_165241340_165245310_165245339_165281696_165281812_165286331_165286402_165288701_165288833_165290704_165290743_165291901
ES.38046.34	chrX	-	1059	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	181	207	-40	-207	multi-exon	FALSE	canonical	3	555	junction_2	7.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGATGACCAAGAACTG	NA	False	NA	NA	False	ATTAAA	-12	NA	165262682	165240455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165241340_165245310_165245339_165262535
ES.38046.35	chrX	-	923	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	185	339	-36	158	multi-exon	FALSE	canonical	3	555	junction_2	7.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGCCTCATTAGTC	NA	False	NA	-2	True	AATAAA	-14	NA	165262678	165240587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165241340_165245310_165245339_165262535
ES.38046.36	chrX	-	4879	2	NIC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-21	158	intron_retention	FALSE	canonical	3	555	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGCCTCATTAGTC	NA	False	NA	-2	True	AATAAA	-14	NA	165262663	165240587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165245339_165262535
ES.38046.37	chrX	-	1018	3	NNC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	-10	158	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	280.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTTGCCTCATTAGTC	NA	False	NA	-2	True	AATAAA	-14	NA	165262652	165240587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165241340_165245310_165245339_165262414
ES.38046.38	chrX	-	4040	1	NIC	ENSMUSG00000079316.11	novel	876	5	NA	NA	8003	-5258	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTTGGGGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	165250428	165246388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165246400_165250400
ES.38046.39	chrX	-	175	1	Intergenic	novelGene_31179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAGCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	165277625	165277450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_165277400_165277600
ES.38046.40	chrX	-	5325	4	ISM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	11	0	11	0	intron_retention	FALSE	canonical	3	63	junction_2	3.09120616516523	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293463	165282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901
ES.38046.41	chrX	-	4051	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	-1	0	-1	0	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293475	165282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
ES.38046.43	chrX	-	4054	5	NNC	ENSMUSG00000051224.14	novel	4050	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	28.4165444767656	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293456	165282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293266
ES.38046.44	chrX	-	4005	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112187.2	535	5	10	-3480	10	0	multi-exon	FALSE	canonical	0	0	junction_4	29.2788319439147	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165301553	165282807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165301412
ES.38046.45	chrX	-	5002	5	NNC	ENSMUSG00000051224.14	novel	4050	5	NA	NA	11	-5	intron_retention	FALSE	canonical	0	0	junction_1	29.2788319439147	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTCTTATTCTCCAA	NA	False	NA	-7	True	AATAAA	-15	NA	165293463	165282812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165286014_165286331_165286402_165288701_165288833_165290704_165290743_165291901
ES.38046.47	chrX	-	3245	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	11	794	11	-794	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTTTTGATTTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	165293463	165283601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
ES.38046.6	chrX	-	3416	22	NIC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	-3	-903	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	40.5380479714223	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223703	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.7	chrX	-	3308	8	ISM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	32268	903	32268	-903	3prime_fragment	FALSE	canonical	3	148	junction_7	19.3390796058137	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165191432	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992
ES.38046.8	chrX	-	5238	22	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	-4	-903	intron_retention	FALSE	canonical	3	33	junction_8	34.966845326807	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223704	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38046.9	chrX	-	3403	22	NIC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	27	-903	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	40.1192101169522	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223673	165173931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ES.38047.1	chrX	+	142	1	Antisense	novelGene_ENSMUSG00000000402.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	165314933	165315075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_165314900_165315100
ES.38048.1	chrX	+	189	1	Intergenic	novelGene_31181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTCACTTAGCTAGTTA	NA	False	NA	NA	False	NA	NA	NA	165323743	165323932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_165323700_165323900
ES.38049.1	chrX	+	4870	1	Antisense	novelGene_ENSMUSG00000000402.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTTGAGACTGGTCA	NA	False	NA	NA	False	NA	NA	NA	165347293	165352163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_165347300_165352200
ES.3805.1	chr10	-	177	1	Intergenic	novelGene_2892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	117266984	117266807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117266800_117267000
ES.38050.1	chrX	-	1760	6	NNC	ENSMUSG00000000402.3	novel	2704	12	NA	NA	46682	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	5.72712842531054	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGAAACACTTTGTCA	5409	False	NA	NA	False	AATAAA	-17	NA	165322034	165306000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165322011
ES.38050.2	chrX	-	2714	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	-12	2	-12	-2	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTGTTGAAACACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	165368728	165306004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
ES.38050.3	chrX	-	2775	13	NNC	ENSMUSG00000000402.3	novel	2704	12	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.29097678336909	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTGTTGAAACACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	165368745	165306004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165306968_165310309_165310576_165312493_165312538_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
ES.38050.5	chrX	-	2967	1	NIC	ENSMUSG00000000402.3	novel	2704	12	NA	NA	55747	-4000	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAGGTTGTTTTAAC	NA	False	NA	NA	False	AATAAA	-21	NA	165312969	165310002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_165310000_165313000
ES.38050.6	chrX	-	929	4	NNC	ENSMUSG00000000402.3	novel	2704	12	NA	NA	46851	-8171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.94422221866655	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTCCTTCCCAAGTT	5578	False	NA	NA	False	ATTAAA	-14	NA	165321865	165314173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165314464_165314967_165315070_165319195_165319277_165321409
ES.38050.7	chrX	-	171	1	Intergenic	novelGene_31180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGGAAGAGAAGGAAGG	6146	False	NA	NA	False	NA	NA	NA	165321297	165321126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_165321100_165321300
ES.38050.8	chrX	-	612	3	ISM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	78	39716	78	-39716	5prime_fragment	FALSE	canonical	3	11	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTATGGTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	165368638	165345718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_165346031_165351404_165351518_165368451
ES.38051.1	chrX	+	3234	5	NNC	ENSMUSG00000086860.2	novel	1503	9	NA	NA	-35198	-3709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	165409822	165469099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_165409882_165446439_165446480_165446860_165446979_165464901_165465000_165466180
ES.38052.1	chrX	+	867	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	-23	-43	-23	43	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATTACATC	NA	False	NA	NA	False	CATAAA	-17	NA	165637183	165638050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_+_165637200_165638000
ES.38052.2	chrX	+	775	2	Genic_Genomic	ENSMUSG00000067147.8	novel	801	1	NA	NA	-18	36	multi-exon	FALSE	non_canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAAAAAGAAA	NA	False	NA	NA	False	CATAAA	-10	NA	165637188	165638043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_+_165637622_165637701
ES.38053.1	chrX	-	3839	4	NNC	ENSMUSG00000049775.17	novel	768	3	NA	NA	-4692	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	573.841441514989	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTGTCTGCTTGGTG	NA	False	NA	-1	True	AATAAA	-14	NA	165997003	165990089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165990532_165990932_165991048_165992101_165994706_165996325
ES.38053.2	chrX	-	1085	4	NNC	ENSMUSG00000049775.17	novel	768	3	NA	NA	-4305	-1	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_3	563.006414015171	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGGTGTGTCTGCTTGG	NA	False	NA	-3	True	AATAAA	-12	NA	165996616	165990091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_165990532_165990932_165991048_165992101_165992341_165996325
ES.38053.3	chrX	-	2610	1	Intergenic	novelGene_31182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAAAATATCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	165996975	165994365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_165994400_165997000
ES.38054.1	chrX	+	2259	2	Antisense	novelGene_ENSMUSG00000025742.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	166130998	166134773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_+_166131992_166133507
ES.38055.1	chrX	-	3713	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	-12	-2	-12	2	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGTCATCCTTTTGGA	NA	False	NA	-1	True	AATAAA	-26	NA	166165757	166129315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.10	chrX	-	2738	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	-19	-775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.3659506560229	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTGGGTTTTATGG	NA	False	NA	-1	True	GATAAA	-13	NA	166165725	166130092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131829_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.11	chrX	-	2237	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	53	1409	14	-1409	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCATTGTGAAGAAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	166165692	166130726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.12	chrX	-	1665	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	70	1964	31	-1964	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTAATTGCCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	166165675	166131281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.13	chrX	-	1626	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	707	-1965	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	90.6347983208804	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTTAATTGCCACT	NA	False	NA	NA	False	ATTAAA	-17	NA	166164999	166131282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166164836
ES.38055.14	chrX	-	1597	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	1	-2110	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	70.4258869703148	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTGTTTTTTTCT	NA	False	NA	-6	True	NA	NA	NA	166165744	166131427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ES.38055.15	chrX	-	1586	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	2	2111	2	-2111	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTTTGTTGTTTTTTTC	NA	False	NA	-7	True	NA	NA	NA	166165743	166131428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.16	chrX	-	1414	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	1	2284	1	-2284	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCCCATTGTGGAAAT	NA	False	NA	NA	False	NA	NA	NA	166165744	166131601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.17	chrX	-	594	3	FSM	ENSMUSG00000025742.6	ENSMUST00000145456.2	599	3	1	4	1	-4	multi-exon	FALSE	canonical	1	3	junction_1	111.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAATTTATGTCCTA	NA	False	NA	NA	False	AATAAA	-21	NA	166165705	166155408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166155579_166156998_166157183_166165465
ES.38055.2	chrX	-	3309	5	NIC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	18	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.28629415197	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGTCATCCTTTTGG	NA	False	NA	-2	True	AATAAA	-25	NA	166165688	166129316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_166131995_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.3	chrX	-	3703	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	70.4258869703148	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTCTTGTCATCCTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	166165741	166129318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ES.38055.4	chrX	-	5108	6	NIC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	8	-5	intron_retention	FALSE	canonical	3	187	junction_4	12.7530388535439	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTTCTTGTCATCC	NA	False	NA	-8	True	AATAAA	-19	NA	166165698	166129322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_166131995_166133510_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.5	chrX	-	3955	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	329	-5	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	72.9771653784022	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTTCTTGTCATCC	NA	False	NA	-8	True	AATAAA	-19	NA	166165377	166129322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166164836
ES.38055.6	chrX	-	3658	8	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	86	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.2871064366068	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTCTTTCATAGTTCT	NA	False	NA	-16	True	AATAAA	-11	NA	166165620	166129330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166141860_166141958_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.7	chrX	-	3228	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	27	444	-12	-444	multi-exon	FALSE	canonical	3	187	junction_5	11.6535640709422	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAGACTGGACTGGGCC	NA	False	NA	NA	False	AATACA	-10	NA	166165718	166129761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ES.38055.8	chrX	-	2919	7	NNC	ENSMUSG00000025742.6	novel	3699	7	NA	NA	17	-772	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	70.4258869703148	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGGTTTTATGGCTG	NA	False	NA	2	True	GATAAA	-16	NA	166165728	166130089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ES.38055.9	chrX	-	2639	6	ISM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	8568	775	8529	-775	3prime_fragment	FALSE	canonical	3	187	junction_5	9.60416576283438	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTGGGTTTTATGG	NA	False	NA	-1	True	GATAAA	-13	NA	166157177	166130092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998
ES.38056.1	chrX	-	175	1	Intergenic	novelGene_31183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATAAATAGGGA	NA	False	NA	NA	False	NA	NA	NA	166348648	166348473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_166348500_166348600
ES.38057.1	chrX	+	176	1	Intergenic	novelGene_31184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	166955090	166955266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_166955100_166955300
ES.38058.1	chrX	+	4741	1	Intergenic	novelGene_31185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	166959818	166964559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_166959800_166964600
ES.38059.1	chrX	-	7045	11	NIC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	37	2848	intron_retention	FALSE	canonical	0	0	junction_4	16.5275527529033	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167456857	167434264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167456723
ES.38059.11	chrX	-	2002	10	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	2205	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	15.7268348161139	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAGAGGAGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	167453310	167437115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439677_167439732_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215
ES.38059.12	chrX	-	4382	11	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	8	2	intron_retention	FALSE	canonical	3	6	junction_8	12.2539789456323	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAGAGGAGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	167455507	167437115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167455258
ES.38059.13	chrX	-	2711	12	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	-401	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.0191418723649	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAGAGGAGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	167457295	167437115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
ES.38059.15	chrX	-	2299	12	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	-8	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.5701558138034	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATACTCTGCTATGT	NA	False	NA	NA	False	AATAAA	-27	NA	167455523	167437205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453230_167453305_167454138_167454240_167454790_167454887_167455258
ES.38059.16	chrX	-	1974	12	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	-396	-730	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.0191418723649	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTGCACTATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	167457290	167437847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
ES.38059.17	chrX	-	2658	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	388	735	388	-730	3prime_fragment	FALSE	canonical	3	23	junction_11	7.54928708800971	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTGCACTATGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	167456506	167437847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
ES.38059.2	chrX	-	5283	12	ISM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	1346	-2848	-33	2848	3prime_fragment	FALSE	canonical	3	23	junction_11	7.54928708800971	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167455548	167434264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
ES.38059.3	chrX	-	5160	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	55	2848	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	16.5753749748099	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167456839	167434264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439677_167439732_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
ES.38059.4	chrX	-	7099	11	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	56	2848	intron_retention	FALSE	canonical	3	6	junction_8	11.5568161705549	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167456838	167434264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
ES.38059.5	chrX	-	4225	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	-7	2848	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	12.7287404456738	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTTTTGTCGGGTAT	NA	False	NA	NA	False	NA	NA	NA	167455522	167434264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167435081_167436112_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258
ES.38059.6	chrX	-	5028	12	NNC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	130	2845	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	11.0191418723649	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGCTCTTTTTGTCGGG	NA	False	NA	NA	False	NA	NA	NA	167456764	167434267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453305_167454138_167454240_167454790_167454887_167456723
ES.38059.7	chrX	-	2826	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	402	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.7287404456738	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGCTCTGGCCTTTCC	NA	False	NA	NA	False	AATAAA	-34	NA	167456492	167437101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167455905
ES.38059.8	chrX	-	2400	13	NNC	ENSMUSG00000031358.18	novel	2399	13	NA	NA	56	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	12.7287404456738	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTTTGCTCTGGCCTT	NA	False	NA	NA	False	AATAAA	-31	NA	167456838	167437104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455391_167456723
ES.38059.9	chrX	-	4266	11	NIC	ENSMUSG00000031358.18	novel	2316	12	NA	NA	44	0	intron_retention	FALSE	canonical	3	28	junction_8	6.44980619863884	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	167456850	167437112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ES.3806.1	chr10	+	184	1	Intergenic	novelGene_2893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAACACATTT	NA	False	NA	NA	False	NA	NA	NA	117436414	117436598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117436400_117436600
ES.38060.1	chrX	+	1582	1	Intergenic	novelGene_31186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAGTAAGGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	167942958	167944540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_167943000_167944500
ES.38061.1	chrX	-	1039	5	NNC	ENSMUSG00000031352.11	novel	3310	9	NA	NA	17236	1076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATCCTGTTAATGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	168086040	168032112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168032513_168055439_168055548_168083923_168084048_168084865_168084943_168085710
ES.38061.2	chrX	-	2511	1	NIC	ENSMUSG00000031352.11	novel	3310	9	NA	NA	45605	-21972	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	168057671	168055160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168055200_168057700
ES.38062.1	chrX	-	2413	7	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	2	63	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	191.804950115707	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGGTCTCATCTGTTA	NA	False	NA	63	True	GATAAA	-21	NA	168103366	168094462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103170
ES.38062.10	chrX	-	2306	7	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	36	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	256.594362110056	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTCTTAGAGTGATTT	NA	False	NA	-4	True	AATAAA	-21	NA	168103332	168094529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096019_168096583_168096671_168098603_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103170
ES.38062.11	chrX	-	5427	4	NIC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	33	-4	intron_retention	FALSE	canonical	3	290	junction_3	155.104982368574	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTCTTAGAGTGATTT	NA	False	NA	-4	True	AATAAA	-21	NA	168103335	168094529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096019_168096583_168100144_168102433_168102587_168103110
ES.38062.12	chrX	-	8319	2	NIC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	290	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTCTTAGAGTGATT	NA	False	NA	-5	True	AATAAA	-20	NA	168103373	168094530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168102587_168103110
ES.38062.13	chrX	-	5572	4	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	26	-5	intron_retention	FALSE	canonical	3	158	junction_3	216.988991016185	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTTCTTAGAGTGATT	NA	False	NA	-5	True	AATAAA	-20	NA	168103342	168094530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096019_168096583_168100144_168102433_168102587_168102971
ES.38062.14	chrX	-	3393	5	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	18	-6	intron_retention	FALSE	canonical	3	158	junction_4	184.724626133063	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACTTCTTAGAGTGAT	NA	False	NA	-6	True	AATAAA	-19	NA	168103350	168094531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096671_168098597_168098718_168099541_168100144_168102433_168102587_168102971
ES.38062.15	chrX	-	5542	5	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	17	-7	intron_retention	FALSE	canonical	0	0	junction_2	274.996704525709	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAACTTCTTAGAGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	168103351	168094532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096019_168096583_168097322_168097358_168100144_168102433_168102587_168102971
ES.38062.16	chrX	-	2481	7	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	242.407828989815	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAACTTCTTAGAGTGA	NA	False	NA	-7	True	AATAAA	-18	NA	168103341	168094532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099655_168099991_168100144_168102433_168102587_168102971
ES.38062.17	chrX	-	5974	3	NIC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	-31	-8	intron_retention	FALSE	canonical	3	290	junction_2	175	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAAACTTCTTAGAGTG	NA	False	NA	-8	True	AATAAA	-17	NA	168103321	168094533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168100144_168102433_168102587_168103110
ES.38062.18	chrX	-	5016	2	NNC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	3688	-10	intron_retention	FALSE	canonical	0	0	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGAAACTTCTTAGAG	NA	False	NA	-10	True	AATAAA	-15	NA	168099588	168094535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168097322_168097358
ES.38062.19	chrX	-	2363	7	NNC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	36	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	214.459009292374	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGAAACTTCTTAGAG	NA	False	NA	-10	True	AATAAA	-15	NA	168103332	168094535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096012_168096579_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ES.38062.2	chrX	-	2740	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	-210	-57	-132	57	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGCAGTGGTCTCAT	NA	False	NA	57	True	GATAAA	-15	NA	168103500	168094468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
ES.38062.21	chrX	-	3536	5	NIC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	-13	-14	intron_retention	FALSE	canonical	3	290	junction_4	135.294124040921	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTCTGAAACTTCTT	NA	False	NA	-14	True	AATAAA	-11	NA	168103381	168094539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096019_168096583_168096671_168098597_168100144_168102433_168102587_168103110
ES.38062.3	chrX	-	2579	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	-202	-57	-110	57	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGCAGTGGTCTCAT	NA	False	NA	57	True	GATAAA	-15	NA	168103478	168094468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ES.38062.4	chrX	-	2886	7	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	-88	54	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	205.927711156663	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATGCAGCAGTGGTCT	NA	False	NA	54	True	GATAAA	-12	NA	168103456	168094471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102778
ES.38062.5	chrX	-	2537	7	NNC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.380435206294	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103357	168094525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096012_168096579_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
ES.38062.6	chrX	-	6135	3	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	30	-3	intron_retention	FALSE	canonical	3	158	junction_2	241	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	168103338	168094528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168100144_168102433_168102587_168102971
ES.38062.7	chrX	-	3479	5	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	62	junction_4	232.227259381839	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	168103373	168094528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_-_168096019_168096583_168096671_168098597_168100144_168102433_168102587_168103170
ES.38062.8	chrX	-	2370	7	NNC	ENSMUSG00000031352.11	novel	2320	7	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	219.880838940853	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	168103306	168094528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_-_168096019_168096583_168096671_168098597_168098741_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ES.38063.1	chrX	+	4546	5	NIC	ENSMUSG00000087159.8	novel	540	6	NA	NA	-7	1947	intron_retention	FALSE	canonical	1	2	junction_4	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAAGTGTCTTCATTAG	NA	False	NA	NA	False	AATAAA	-14	NA	168103610	168153133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_168105839_168105997_168106098_168113693_168113776_168143982_168144096_168151110
ES.38063.2	chrX	+	3738	1	NIC	ENSMUSG00000087159.8	novel	539	6	NA	NA	31	-36705	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCGCTTCCCATCTCCTC	NA	False	NA	NA	False	AATAAA	-26	NA	168103648	168107386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_168103600_168107400
ES.38063.3	chrX	+	3548	7	NNC	ENSMUSG00000087159.8	novel	540	6	NA	NA	31	1943	intron_retention	FALSE	canonical	0	0	junction_5	2.54405625374562	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTCAAGTGTCTTCA	NA	False	NA	NA	False	AATAAA	-10	NA	168103648	168153129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrX_+_168103694_168104750_168105839_168105997_168106098_168113693_168113776_168143982_168144096_168148976_168149078_168151110
ES.38063.4	chrX	+	2284	1	NIC	ENSMUSG00000087159.8	novel	539	6	NA	NA	31	-38159	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGTGTTTATG	NA	False	NA	NA	False	NA	NA	NA	168103648	168105932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_168103600_168105900
ES.38063.5	chrX	+	2366	5	NIC	ENSMUSG00000087159.8	novel	540	6	NA	NA	32	1951	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.12132034355964	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTCTTCATTAGAATT	NA	False	NA	NA	False	AATAAA	-18	NA	168103649	168153137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chrX_+_168103694_168105997_168106098_168113693_168113776_168143982_168144096_168151110
ES.38064.1	chrX	+	849	1	Intergenic	novelGene_31187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATACAGGAGAACAC	NA	False	NA	NA	False	NA	NA	NA	168194930	168195779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_168194900_168195800
ES.38065.1	chrX	-	3382	1	Intergenic	novelGene_31188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGAAATGTGGGATGCCA	NA	False	NA	NA	False	NA	NA	NA	168369508	168366126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_168366100_168369500
ES.38066.1	chrX	-	1033	1	Genic_Genomic	ENSMUSG00000055357.9	novel	NA	NA	NA	NA	2324	56	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTCCCAGGTAAT	NA	False	NA	NA	False	AATAAA	-9	NA	168560229	168559196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chrX_-_168559200_168560200
ES.38067.1	chrX	-	153	1	Intergenic	novelGene_31189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAATAAATAAAACTT	3648	False	NA	NA	False	NA	NA	NA	168573790	168573637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_168573600_168573800
ES.38068.1	chrX	-	176	2	Antisense	novelGene_ENSMUSG00000095562.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168800440	168794435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_168794445_168800273
ES.38069.1	chrX	-	1514	2	Antisense	novelGene_ENSMUSG00000095562.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1555	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGGTTGCAGTGACAA	NA	False	NA	NA	False	AAAAAG	-29	NA	168802672	168801081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrX_-_168801180_168801256
ES.3807.1	chr10	+	5190	9	NNC	ENSMUSG00000020183.12	novel	5195	9	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.3418742493994	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTTGTCTCTTTCCAC	NA	False	NA	NA	False	AATAAA	-15	NA	117465405	117523253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_117465433_117465625_117465793_117495676_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182
ES.3807.2	chr10	+	967	7	NNC	ENSMUSG00000020183.12	novel	5195	9	NA	NA	2	7854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGTGTCCTATATCTT	NA	False	NA	NA	False	TATAAA	-13	NA	117465406	117511995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_117465433_117465625_117465793_117495676_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844
ES.3807.3	chr10	+	2544	7	ISM	ENSMUSG00000020183.12	ENSMUST00000020399.6	5195	9	30322	2406	-16071	12	3prime_fragment	FALSE	canonical	0	0	junction_6	2.40947204913349	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGTAAATGCGTTT	NA	False	NA	NA	False	NA	NA	NA	117495726	117520851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_117495771_117503853_117504027_117506071_117506257_117507500_117507672_117511844_117511998_117515867_117516017_117519182
ES.38070.1	chrX	-	2420	5	Intergenic	novelGene_31190	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.92028643696715	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTCGCTGCGACGT	NA	False	NA	NA	False	AATAAA	-12	NA	169089004	169082921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169084026_169085637_169085786_169087069_169088030_169088227_169088335_169088903
ES.38071.1	chrX	+	2425	3	Intergenic	novelGene_31191	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCGTCAGGCCAGTGG	6371	False	NA	NA	False	AATAAA	-16	NA	169089120	169094908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169089246_169092412_169093431_169093626
ES.38072.1	chrX	+	3286	6	Intergenic	novelGene_31200	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	32.6030673403593	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	5974	False	NA	2	True	AATAAA	-16	NA	169097631	169105546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169098429_169099553_169099673_169099929_169100868_169101639_169101789_169102375_169102617_169104504
ES.38072.2	chrX	+	2943	5	Intergenic	novelGene_31201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	16.3764312351623	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	45	False	NA	2	True	AATAAA	-16	NA	169097855	169105546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169098429_169099929_169100868_169101639_169101789_169102375_169102617_169104504
ES.38072.3	chrX	+	2537	5	Intergenic	novelGene_31202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	33.860005906674	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	97	False	NA	2	True	AATAAA	-16	NA	169097907	169105546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169098075_169099929_169100868_169101639_169101789_169102375_169102617_169104504
ES.38072.4	chrX	+	2983	5	Intergenic	novelGene_31203	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	28.2533183891733	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	381	False	NA	2	True	AATAAA	-16	NA	169098191	169105546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169098429_169099553_169100868_169101639_169101789_169102375_169102617_169104504
ES.38072.5	chrX	+	1835	2	Intergenic	novelGene_31204	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCCCCGGCGTCGGCTC	2661	False	NA	-1	True	AATAAA	-13	NA	169101820	169105543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_+_169102617_169104504
ES.38073.1	chrX	-	1621	6	Intergenic	novelGene_31196	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_5	11.7813411800185	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094740	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169093033_169093216_169093264_169094086
ES.38073.2	chrX	-	1208	7	Intergenic	novelGene_31194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_4	17.1949605020386	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094605	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092690_169092967_169093033_169093216_169093264_169094086
ES.38073.3	chrX	-	985	7	Intergenic	novelGene_31192	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_5	23.0849879070072	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094331	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092690_169092967_169093061_169093216_169093264_169094063
ES.38073.4	chrX	-	4162	8	Intergenic	novelGene_31198	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	21.296737318382	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169100390	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092276_169092526_169092796_169092967_169093033_169093216_169093264_169094086_169094755_169097704
ES.38073.5	chrX	-	1060	7	Intergenic	novelGene_31193	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_3	19.5056971734471	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094444	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092276_169092526_169092690_169092967_169093033_169093216_169093264_169094086
ES.38073.6	chrX	-	1729	8	Intergenic	novelGene_31197	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_7	16.4639370895845	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169098174	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092592_169092967_169093033_169093216_169093264_169094086_169094755_169097704
ES.38073.7	chrX	-	1297	7	Intergenic	novelGene_31195	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	22.8375908439475	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCCTGCCTTACACAGT	NA	False	NA	-2	True	AATAAA	-16	NA	169094629	169090871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092170_169092263_169092526_169092592_169092967_169093061_169093216_169093376_169094063
ES.38073.8	chrX	-	957	7	Intergenic	novelGene_31199	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	15.9417341869976	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCCCTGCCTTACACA	NA	False	NA	-4	True	AATAAA	-14	NA	169094444	169090873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_-_169091046_169091285_169091434_169092160_169092263_169092526_169092592_169092967_169093033_169093216_169093264_169094086
ES.38074.1	chrX_GL456233v2_random	-	2553	8	Intergenic	novelGene_31205	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTTCTTAGTATAGTT	NA	False	NA	12	True	AATAAA	-29	NA	134115	105690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.10	chrX_GL456233v2_random	-	1864	8	Intergenic	novelGene_31214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATTGTAGTAAAAGAAA	NA	False	NA	NA	False	AATACA	-17	NA	134099	106363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.11	chrX_GL456233v2_random	-	1585	9	Intergenic	novelGene_31215	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_8	156.781695360141	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAGGCAAATACCTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	134078	106668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133802_133850_133984
ES.38074.12	chrX_GL456233v2_random	-	1590	8	Intergenic	novelGene_31216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGAGGCAAATACCTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	134130	106668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.13	chrX_GL456233v2_random	-	1528	8	Intergenic	novelGene_31217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	131.4965662623	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGGGGAGGCAAATAC	NA	False	NA	NA	False	AATAAA	-12	NA	134099	106673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109107_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.14	chrX_GL456233v2_random	-	1580	9	Intergenic	novelGene_31218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	175.638656052704	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGGGGAGGCAAATAC	NA	False	NA	NA	False	AATAAA	-12	NA	134107	106673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123267_123351_123935_124074_125547_125606_127454_127545_133984
ES.38074.15	chrX_GL456233v2_random	-	1461	8	Intergenic	novelGene_31219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTTTAATACCTTCTG	NA	False	NA	-2	True	AATAAA	-28	NA	134139	106806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.16	chrX_GL456233v2_random	-	8889	7	Intergenic	novelGene_31220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	20.5379053351493	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATAGTTTAATACCTTCT	NA	False	NA	-3	True	AATAAA	-27	NA	134108	106807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.17	chrX_GL456233v2_random	-	1364	8	Intergenic	novelGene_31221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	123.884080115737	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCACATAGTTTAATACC	NA	False	NA	-7	True	AATAAA	-23	NA	134112	106811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127454_127545_133984
ES.38074.18	chrX_GL456233v2_random	-	2208	7	Intergenic	novelGene_31222	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_6	126.232149453123	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGTGTTCATCTATAT	NA	False	NA	NA	False	AGTAAA	-17	NA	134103	107515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
ES.38074.2	chrX_GL456233v2_random	-	2567	9	Intergenic	novelGene_31206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	169.995174563868	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTTTAATAAGTTCT	NA	False	NA	2	True	AATAAA	-19	NA	134103	105700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_120337_120412_123935_124074_125547_125606_127389_127507_133984
ES.38074.3	chrX_GL456233v2_random	-	2369	7	Intergenic	novelGene_31207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_6	136.580460616525	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTTCTTTAATAAGTTC	NA	False	NA	1	True	AATAAA	-18	NA	134107	105701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125622_134010
ES.38074.4	chrX_GL456233v2_random	-	2536	8	Intergenic	novelGene_31208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	131.4965662623	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTCTTCTTTAATAA	NA	False	NA	-3	True	AATAAA	-14	NA	134139	105705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109107_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.5	chrX_GL456233v2_random	-	2478	8	Intergenic	novelGene_31209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	123.884080115737	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTTTCTTCTTTAATA	NA	False	NA	-4	True	AATAAA	-13	NA	134121	105706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127454_127545_133984
ES.38074.6	chrX_GL456233v2_random	-	2354	8	Intergenic	novelGene_31210	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	123.884080115737	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTTAAGAGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	134107	105816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127454_127545_133984
ES.38074.7	chrX_GL456233v2_random	-	2418	8	Intergenic	novelGene_31211	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	354	junction_1	19.1641672431246	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGTTTAATTACTTAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	134113	105823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.8	chrX_GL456233v2_random	-	2246	7	Intergenic	novelGene_31212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	140.486851895669	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCTGAATAAAATTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	134064	105853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_116592_116661_119836_119928_123935_124074_125547_125606_127389_127545_133984
ES.38074.9	chrX_GL456233v2_random	-	2329	8	Intergenic	novelGene_31213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_7	117.818088767457	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCCTTTCTTATAAAAC	NA	False	NA	NA	False	AATAAA	-13	NA	134107	105868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
ES.38075.1	chrX_GL456233v2_random	+	2270	8	Intergenic	novelGene_31223	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGAGGGTTAAATTTT	NA	False	NA	NA	False	NA	NA	NA	251309	468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
ES.38075.2	chrX_GL456233v2_random	+	2021	7	Intergenic	novelGene_31225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_5	16.8794747153656	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTGTGAGGGTTAAATT	NA	False	NA	NA	False	NA	NA	NA	251319	468928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_467193_467333_467938
ES.38075.3	chrX_GL456233v2_random	+	3687	6	Intergenic	novelGene_31224	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.8	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTCTGTCATGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	251319	463699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904
ES.38075.4	chrX_GL456233v2_random	+	2247	7	Intergenic	novelGene_31226	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_5	16.8794747153656	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTCACTATAGTATGAT	NA	False	NA	NA	False	NA	NA	NA	251332	469167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_467193_467333_467938
ES.38075.5	chrX_GL456233v2_random	+	1461	8	Intergenic	novelGene_31227	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGTTGTCTATTTTCC	NA	False	NA	NA	False	NA	NA	NA	251343	468155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
ES.38075.6	chrX_GL456233v2_random	+	2177	2	Intergenic	novelGene_31229	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGAGGGTTAAATTT	NA	False	NA	NA	False	NA	NA	NA	466146	468929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_+_467333_467938
ES.38076.1	chrX_GL456233v2_random	-	2396	1	Intergenic	novelGene_31228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGCCCAG	NA	False	NA	NA	False	NA	NA	NA	420414	418018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrX_GL456233v2_random_-_418000_420400
ES.38077.1	chrY	+	3206	1	Intergenic	novelGene_31230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	2780995	2784201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_2781000_2784200
ES.38078.1	chrY	-	5462	1	Intergenic	novelGene_31231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	2879919	2874457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_2874500_2879900
ES.38079.1	chrY	+	2056	2	Antisense	novelGene_ENSMUSG00000100082.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	4911	False	NA	NA	False	NA	NA	NA	3939584	3962353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrY_+_3941286_3961998
ES.3808.1	chr10	+	243	1	Antisense	novelGene_ENSMUSG00000020184.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGCAAATAAATAACATCAA	NA	False	NA	NA	False	AATAAA	-9	NA	117524581	117524824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_117524600_117524800
ES.38080.1	chrY	-	179	1	Intergenic	novelGene_31232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	4413654	4413475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_4413500_4413700
ES.38081.1	chrY	-	4113	2	Intergenic	novelGene_31233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	11214353	11209693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_11212485_11213031
ES.38082.1	chrY	+	177	1	Intergenic	novelGene_31234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATTAATAT	NA	False	NA	NA	False	NA	NA	NA	12289831	12290008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_12289800_12290000
ES.38083.1	chrY	+	835	1	FSM	ENSMUSG00000096438.4	ENSMUST00000180966.2	1002	1	349	-182	349	182	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	38575476	38576311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chrY_+_38575500_38576300
ES.38084.1	chrY	+	181	1	Intergenic	novelGene_31235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	41547621	41547802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_41547600_41547800
ES.38085.1	chrY	-	5795	1	Intergenic	novelGene_31236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	43885711	43879916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_43879900_43885700
ES.38085.2	chrY	-	3428	2	Intergenic	novelGene_31237	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCGTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	43883406	43879917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_43881431_43881491
ES.38086.1	chrY	-	180	1	Intergenic	novelGene_31238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATTAACTGCA	NA	False	NA	NA	False	NA	NA	NA	44198112	44197932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_44197900_44198100
ES.38087.1	chrY	+	6765	1	Intergenic	novelGene_31240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTC	NA	False	NA	NA	False	NA	NA	NA	47718853	47725618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_47718900_47725600
ES.38087.2	chrY	+	597	3	Intergenic	novelGene_31239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_1	6	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	47718853	47725616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_47719090_47724582_47724732_47725404
ES.38087.3	chrY	+	5249	3	Intergenic	novelGene_31241	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	47718854	47725615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_47719278_47719347_47722349_47723790
ES.38087.5	chrY	+	1999	1	Intergenic	novelGene_31242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	47719206	47721205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_47719200_47721200
ES.38088.1	chrY	-	173	1	Intergenic	novelGene_31243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	58560058	58559885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_58559900_58560100
ES.38089.1	chrY	+	2205	2	Intergenic	novelGene_31244	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	60516270	60519911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_60516646_60518081
ES.3809.1	chr10	+	2791	1	Antisense	novelGene_ENSMUSG00000020184.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGTGAGTAGAGAGCC	3716	False	NA	NA	False	NA	NA	NA	117534757	117537548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_117534800_117537500
ES.3809.2	chr10	+	188	1	Intergenic	novelGene_2895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	3716	False	NA	NA	False	NA	NA	NA	117534757	117534945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117534800_117534900
ES.38090.1	chrY	+	3208	2	Intergenic	novelGene_31245	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTTTGGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	87788160	87792305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_87790155_87791091
ES.38090.2	chrY	+	2066	2	Intergenic	novelGene_31246	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTTTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	87788218	87792304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_87788667_87790686
ES.38090.3	chrY	+	4080	1	Intergenic	novelGene_31247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTCTGTGGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	87788230	87792310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_87788200_87792300
ES.38091.1	chrY	+	87	1	Intergenic	novelGene_31248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCAAATGTGTGTGTGT	9068	False	NA	26	True	AATAAA	-17	NA	90750439	90750526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_+_90750400_90750500
ES.38092.1	chrY	+	1341	5	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	-611	0	intron_retention	FALSE	canonical	3	234	junction_2	136.737659406617	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3341	False	NA	NA	False	AATAAA	-17	NA	90795395	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804950_90827617
ES.38092.11	chrY	+	1178	5	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	-547	0	intron_retention	FALSE	canonical	0	0	junction_3	189.627925158717	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3405	False	NA	NA	False	AATAAA	-17	NA	90795459	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804663_90804950_90827617
ES.38092.12	chrY	+	1646	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-546	3	intron_retention	FALSE	non_canonical	0	0	junction_1	826.400780493339	2574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	3406	False	NA	NA	False	AATAAA	-14	NA	90795460	90827730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795620_90795915_90796099_90796179_90797249_90804564_90804687_90827617
ES.38092.13	chrY	+	1857	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-541	0	intron_retention	FALSE	non_canonical	0	0	junction_2	829.4083358033	2574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3411	False	NA	NA	False	AATAAA	-17	NA	90795465	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90796126_90796205_90797249_90804546_90804687_90827617
ES.38092.14	chrY	+	881	5	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	-541	0	intron_retention	FALSE	non_canonical	0	0	junction_3	189.627925158717	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3411	False	NA	NA	False	AATAAA	-17	NA	90795465	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90796958_90804663_90804950_90827617
ES.38092.15	chrY	+	5026	6	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-541	6	intron_retention	TRUE	non_canonical	0	0	junction_3	758.588689607221	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGTGTGTCTTCCTT	3411	False	NA	NA	False	AATAAA	-24	NA	90795465	90827740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90798236_90800325_90801205_90802419_90804687_90827617
ES.38092.16	chrY	+	5018	7	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-539	5937	intron_retention	TRUE	non_canonical	0	0	junction_3	720.132954545355	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3413	False	NA	NA	False	AATAAA	-18	NA	90795467	90833671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90798236_90800325_90801205_90801249_90801868_90803037_90804687_90833554
ES.38092.17	chrY	+	1017	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-532	0	intron_retention	FALSE	non_canonical	0	0	junction_3	790.218759268597	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3420	False	NA	NA	False	AATAAA	-17	NA	90795474	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804546_90804687_90827617
ES.38092.18	chrY	+	734	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-532	5936	intron_retention	FALSE	canonical	0	0	junction_2	814.393140626811	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3420	False	NA	NA	False	AATAAA	-17	NA	90795474	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795943_90796858_90796989_90804564_90804687_90833554
ES.38092.2	chrY	+	1909	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-605	5	intron_retention	TRUE	canonical	0	0	junction_2	752.144600459247	2574	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGTGTGTCTTCCT	3347	False	NA	NA	False	AATAAA	-23	NA	90795401	90827739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90796126_90796205_90797249_90804564_90804687_90827617
ES.38092.20	chrY	+	1533	3	NNC	ENSMUSG00000096768.9	novel	567	3	NA	NA	37	5936	intron_retention	FALSE	canonical	3	404	junction_2	101.5	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4162	False	NA	NA	False	AATAAA	-17	NA	90796216	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90797249_90804564_90804950_90833554
ES.38092.21	chrY	+	5459	5	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	123	5937	intron_retention	TRUE	non_canonical	0	0	junction_1	174.937131564457	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	4248	False	NA	NA	False	AATAAA	-18	NA	90796302	90833671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90801119_90801253_90801958_90803037_90804950_90833554
ES.38092.22	chrY	+	1064	4	NNC	ENSMUSG00000096768.9	novel	774	4	NA	NA	136	0	intron_retention	FALSE	canonical	1	10	junction_1	844.171783465901	2573	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4261	False	NA	NA	False	AATAAA	-17	NA	90796315	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90796989_90797095_90797249_90804564_90804687_90827617
ES.38092.23	chrY	+	1165	3	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	144	5935	intron_retention	FALSE	canonical	3	68	junction_1	168	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGCAGATGTGTGTGTG	4269	False	NA	NA	False	AATAAA	-16	NA	90796323	90833669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90796989_90804564_90804950_90833554
ES.38092.24	chrY	+	5432	5	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	149	5936	intron_retention	TRUE	non_canonical	0	0	junction_1	174.937131564457	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4274	False	NA	NA	False	AATAAA	-17	NA	90796328	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90801809_90801853_90801868_90803037_90804950_90833554
ES.38092.25	chrY	+	4966	6	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	172	5934	intron_retention	TRUE	non_canonical	0	0	junction_1	806.8	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGCAGATGTGTGTGT	4297	False	NA	NA	False	AATAAA	-15	NA	90796351	90833668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90796404_90796580_90798226_90800316_90801205_90801249_90801868_90803037_90804687_90833554
ES.38092.26	chrY	+	5126	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	191	5935	intron_retention	FALSE	non_canonical	0	0	junction_1	873.386619716606	2583	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGCAGATGTGTGTGTG	4316	False	NA	NA	False	AATAAA	-16	NA	90796370	90833669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90801205_90801249_90801868_90803037_90804687_90833554
ES.38092.27	chrY	+	4936	5	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-33	3	intron_retention	TRUE	non_canonical	0	0	junction_1	175.803156968241	2568	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	4767	False	NA	NA	False	AATAAA	-14	NA	90796821	90827730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90801316_90801360_90801868_90803037_90804950_90827617
ES.38092.28	chrY	+	4196	5	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	186	5937	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	873.386619716606	2566	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5248	False	NA	NA	False	AATAAA	-18	NA	90797302	90833671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90800956_90801810_90801899_90802258_90804687_90833554
ES.38092.29	chrY	+	3964	5	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	418	0	intron_retention	FALSE	non_canonical	0	0	junction_1	875.98469592796	2556	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	5480	False	NA	NA	False	AATAAA	-18	NA	90797534	90827734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90798236_90800325_90801205_90801249_90801868_90803037_90804687_90827617
ES.38092.3	chrY	+	1640	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-602	5936	intron_retention	FALSE	canonical	0	0	junction_2	814.393140626811	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3350	False	NA	NA	False	AATAAA	-17	NA	90795404	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90796126_90796205_90796989_90804564_90804687_90833554
ES.38092.30	chrY	+	3692	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-1196	-1	intron_retention	TRUE	canonical	0	0	junction_1	1011.5	2554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGCAGATGTGTGTGTG	8469	False	NA	NA	False	AATAAA	-16	NA	90800523	90827732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90801685_90802270_90804687_90827617
ES.38092.31	chrY	+	3824	4	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-1110	5935	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	190.447426399577	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGCAGATGTGTGTGTG	8555	False	NA	NA	False	AATAAA	-16	NA	90800609	90833669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90800850_90801075_90801991_90802395_90804950_90833554
ES.38092.32	chrY	+	2797	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-568	0	intron_retention	TRUE	non_canonical	0	0	junction_1	1011.5	2554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	9097	False	NA	NA	False	AATAAA	-17	NA	90801151	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90801609_90802462_90804687_90827617
ES.38092.33	chrY	+	3419	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-568	5936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	202	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	9097	False	NA	NA	False	AATAAA	-17	NA	90801151	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90802026_90802520_90804950_90833554
ES.38092.34	chrY	+	3529	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-275	5934	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	202	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGCAGATGTGTGTGT	9390	False	NA	NA	False	AATAAA	-15	NA	90801444	90833668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90801790_90801879_90804950_90833554
ES.38092.35	chrY	+	3244	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-254	5933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1008.5	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	9411	False	NA	NA	False	AATAAA	-14	NA	90801465	90833667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90801790_90801879_90804687_90833554
ES.38092.36	chrY	+	2015	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	393	5936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1008.5	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	90802112	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90802320_90802994_90804687_90833554
ES.38092.37	chrY	+	1892	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	510	0	intron_retention	TRUE	non_canonical	0	0	junction_1	1011.5	2554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGCAGATGTGT	NA	False	NA	NA	False	AATAAA	-11	NA	90802229	90827727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90802312_90802986_90804687_90827617
ES.38092.38	chrY	+	2433	3	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	559	5936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1008.5	2564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	90802278	90833670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90802524_90802614_90804687_90833554
ES.38092.4	chrY	+	1042	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-573	1	intron_retention	FALSE	canonical	3	234	junction_2	696.056211810512	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGATGTGTGTGTGTCT	3379	False	NA	NA	False	AATAAA	-19	NA	90795433	90827735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804687_90827617
ES.38092.5	chrY	+	5882	6	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-572	5937	intron_retention	TRUE	non_canonical	0	0	junction_2	781.184741274431	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3380	False	NA	NA	False	AATAAA	-18	NA	90795434	90833671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90796126_90796205_90798226_90801125_90801991_90802395_90804687_90833554
ES.38092.6	chrY	+	6137	7	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	-564	5937	intron_retention	TRUE	non_canonical	0	0	junction_2	214.328149237461	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	3388	False	NA	NA	False	AATAAA	-18	NA	90795442	90833671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90796126_90796205_90797720_90799044_90800731_90801045_90801339_90803003_90804950_90833554
ES.38092.7	chrY	+	801	5	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-563	0	intron_retention	FALSE	canonical	1	10	junction_3	187.30923629122	2574	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	3389	False	NA	NA	False	AATAAA	-17	NA	90795443	90827733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90796989_90797095_90797249_90827617
ES.38092.8	chrY	+	1280	5	NNC	ENSMUSG00000096768.9	novel	887	5	NA	NA	-553	5933	intron_retention	FALSE	canonical	3	234	junction_2	136.850968209947	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	3399	False	NA	NA	False	AATAAA	-14	NA	90795453	90833667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795676_90795777_90795948_90796858_90797249_90804564_90804950_90833554
ES.38092.9	chrY	+	4866	8	NNC	ENSMUSG00000096768.9	novel	708	5	NA	NA	-552	5933	intron_retention	TRUE	non_canonical	0	0	junction_1	696.848796295121	2584	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	3400	False	NA	NA	False	AATAAA	-14	NA	90795454	90833667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chrY_+_90795624_90795887_90795948_90796858_90798236_90800325_90801205_90801294_90801669_90801712_90801758_90802837_90804687_90833554
ES.38093.1	chrY	-	2340	4	Antisense	novelGene_ENSMUSG00000096768.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2.82842712474619	1004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGGGTTGCAGTGACAA	2793	False	NA	NA	False	AAAAAG	-29	NA	90809937	90803976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chrY_-_90804075_90804151_90805639_90806894_90807357_90809644
ES.38094.1	chrY	-	620	1	Intergenic	novelGene_31249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATACAAAAATTAAAAT	7249	False	NA	NA	False	ATTAAA	-14	NA	90818058	90817438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chrY_-_90817400_90818100
ES.38095.1	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4854	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00002_+_0_1000
ES.38095.2	ERCC-00002	+	209	1	FSM	ERCC-00002A	DQ459430	1045	1	1	835	1	-835	mono-exon	FALSE	NA	NA	NA	NA	NA	4481	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGAAATATAGGCTTA	NA	False	NA	NA	False	NA	NA	NA	1	210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00002_+_0_200
ES.38095.3	ERCC-00002	+	795	2	Genic_Genomic	ERCC-00002A	novel	1045	1	NA	NA	1	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	1044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00002_+_168_415
ES.38095.4	ERCC-00002	+	678	1	FSM	ERCC-00002A	DQ459430	1045	1	1	366	1	-366	mono-exon	FALSE	NA	NA	NA	NA	NA	4739	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGCGCAATTATCCCC	NA	False	NA	NA	False	NA	NA	NA	1	679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00002_+_0_700
ES.38095.5	ERCC-00002	+	950	2	Genic_Genomic	ERCC-00002A	novel	1045	1	NA	NA	2	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TT	NA	False	NA	NA	False	NA	NA	NA	2	1043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00002_+_330_420
ES.38096.1	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00003_+_0_1000
ES.38096.2	ERCC-00003	+	771	1	FSM	ERCC-00003A	DQ516784	1007	1	2	234	2	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAACAGATATGGCAT	NA	False	NA	NA	False	NA	NA	NA	2	773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00003_+_0_800
ES.38097.1	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00004_+_0_500
ES.38098.1	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00009_+_0_1000
ES.38099.1	ERCC-00019	+	626	1	FSM	ERCC-00019A	DQ883651	627	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00019_+_0_600
ES.381.1	chr1	+	188	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAAAAAAGAGTGGTG	5875	False	NA	NA	False	NA	NA	NA	43736718	43736906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_43736700_43736900
ES.3810.1	chr10	-	179	1	Intergenic	novelGene_2894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	117494326	117494147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117494100_117494300
ES.38100.1	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00022_+_0_700
ES.38101.1	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00025_+_0_2000
ES.38102.1	ERCC-00033	+	2013	1	FSM	ERCC-00033A	DQ516796	2014	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	2014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00033_+_0_2000
ES.38103.1	ERCC-00035	+	1113	1	FSM	ERCC-00035A	DQ459413	1114	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00035_+_0_1100
ES.38104.1	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00042_+_0_1000
ES.38104.2	ERCC-00042	+	622	1	FSM	ERCC-00042A	DQ516783	1007	1	0	385	0	-385	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCATTAACTCCAA	NA	False	NA	NA	False	NA	NA	NA	0	622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00042_+_0_600
ES.38104.3	ERCC-00042	+	715	2	Genic_Genomic	ERCC-00042A	novel	1007	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00042_+_87_378
ES.38105.1	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00043_+_0_1000
ES.38106.1	ERCC-00044	+	1147	1	FSM	ERCC-00044A	DQ459424	1149	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	2	1149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00044_+_0_1100
ES.38107.1	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00046_+_0_500
ES.38107.2	ERCC-00046	+	268	1	FSM	ERCC-00046A	DQ516748	506	1	3	235	3	-235	mono-exon	FALSE	NA	NA	NA	NA	NA	537	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAAAAAGAAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	3	271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00046_+_0_300
ES.38108.1	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00051_+_0_300
ES.38109.1	ERCC-00053	+	1003	1	FSM	ERCC-00053A	DQ516785	1007	1	2	2	2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CT	NA	False	NA	NA	False	NA	NA	NA	2	1005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00053_+_0_1000
ES.3811.1	chr10	-	3035	13	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	8	18004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.791707232262	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAAAAGATACACCATT	NA	False	NA	NA	False	NA	NA	NA	117546608	117506775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117506790_117524802_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.10	chr10	-	3000	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	136.92187553492	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546666	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
ES.3811.12	chr10	-	2958	12	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-67	3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_11	148.070901042498	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546730	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546647
ES.3811.13	chr10	-	4844	9	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	13	3	intron_retention	FALSE	canonical	3	473	junction_4	33.6598332586482	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546184	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
ES.3811.14	chr10	-	5297	7	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	34	3	intron_retention	FALSE	canonical	3	99	junction_6	163.00042603898	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546163	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117528643_117530809_117530974_117531857_117532345_117537469_117538241_117541059_117541135_117545850
ES.3811.15	chr10	-	7737	9	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	499	17	33	3	intron_retention	FALSE	canonical	3	473	junction_6	29.6982217481115	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546164	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059
ES.3811.17	chr10	-	3001	12	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	155.443274445207	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546590	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528494_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.18	chr10	-	3080	12	FSM	ENSMUSG00000020184.16	ENSMUST00000105263.9	3145	12	48	17	1	3	multi-exon	TRUE	canonical	3	51	junction_9	142.979973168527	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546615	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545558_117545690_117545850_117545934_117546456
ES.3811.19	chr10	-	4692	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	7	3	intron_retention	FALSE	canonical	3	316	junction_9	70.2930374298274	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546583	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117528643_117530809_117530974_117531857_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.2	chr10	-	3167	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	-69	1	-69	-1	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTCAGTGATTTT	NA	False	NA	0	True	AATAAA	-40	NA	117546732	117524780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.20	chr10	-	3538	11	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	2	3	intron_retention	FALSE	canonical	0	0	junction_5	161.886040164061	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546588	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531899_117532285_117532345_117537469_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.21	chr10	-	3599	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-3	3	intron_retention	FALSE	canonical	3	316	junction_10	66.2718643166163	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTGTCTTACACATTT	NA	False	NA	-16	True	AATAAA	-24	NA	117546593	117524796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.24	chr10	-	2822	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	199.93597740709	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546588	117524799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
ES.3811.28	chr10	-	5553	8	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	2531	0	intron_retention	FALSE	canonical	3	473	junction_6	31.7438729424712	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117543396	117524799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117538241_117541059
ES.3811.30	chr10	-	2572	7	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	195.814892748795	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546615	117524799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531899_117545850_117545934_117546456
ES.3811.32	chr10	-	5166	8	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	2660	-2	intron_retention	FALSE	canonical	3	473	junction_5	29.4056776414185	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAGATTTGTCTTACA	NA	False	NA	-21	True	AATAAA	-19	NA	117543267	117524801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117532345_117537469_117537520_117538106_117538241_117541059
ES.3811.33	chr10	-	4230	8	NIC	ENSMUSG00000020184.16	novel	3007	10	NA	NA	34	-2	intron_retention	FALSE	canonical	3	99	junction_7	152.449389393761	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAGATTTGTCTTACA	NA	False	NA	-21	True	AATAAA	-19	NA	117546163	117524801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
ES.3811.36	chr10	-	2993	11	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	153.554029579168	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAGATTTGTCTTACA	NA	False	NA	-21	True	AATAAA	-19	NA	117546147	117524801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538150_117541059_117541135_117545604_117545690_117545850
ES.3811.37	chr10	-	9665	10	NIC	ENSMUSG00000020184.16	novel	3145	12	NA	NA	0	-4	intron_retention	FALSE	canonical	3	316	junction_9	67.9064352666026	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAGAGATTTGTCTTA	NA	False	NA	-23	True	AATAAA	-17	NA	117546616	117524803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117545690_117545850_117545934_117546456
ES.3811.38	chr10	-	4424	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	10	-4	intron_retention	FALSE	canonical	3	316	junction_10	66.690629026873	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAGAGATTTGTCTTA	NA	False	NA	-23	True	AATAAA	-17	NA	117546653	117524803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.39	chr10	-	2666	8	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	183.446928320438	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGAAAGAGATTTGTC	NA	False	NA	-26	True	AATAAA	-14	NA	117546631	117524806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531899_117545604_117545690_117545850_117545934_117546456
ES.3811.4	chr10	-	3291	14	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	236.053072961226	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTTTGTCAGTGATT	NA	False	NA	-2	True	AATAAA	-38	NA	117546615	117524782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117527515_117527624_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117532969_117533105_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.41	chr10	-	3132	11	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	156.863125048559	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTGAAAGAGATTTG	NA	False	NA	-28	True	AATAAA	-12	NA	117546211	117524808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531866_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
ES.3811.42	chr10	-	2938	12	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	150.325597035126	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTGTGAAAGAGATTT	NA	False	NA	-29	True	AATAAA	-11	NA	117546650	117524809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546574
ES.3811.43	chr10	-	2846	10	NNC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-36	-10	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_5	194.949566127584	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTGTGAAAGAGATTT	NA	False	NA	-29	True	AATAAA	-11	NA	117546019	117524809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532302_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
ES.3811.44	chr10	-	2295	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	9	795	9	439	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACACACATTTGATCCT	NA	False	NA	NA	False	NA	NA	NA	117546654	117525574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.45	chr10	-	1945	10	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	-32	290	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	135.429996494932	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTGTCTTTCATGTAA	NA	False	NA	NA	False	NA	NA	NA	117546015	117525723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850
ES.3811.46	chr10	-	4424	2	NIC	ENSMUSG00000020184.16	novel	3007	10	NA	NA	-5138	41	intron_retention	FALSE	canonical	3	548	junction_1	0	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGTGAATATTTTCT	NA	False	NA	NA	False	CATAAA	-28	NA	117532563	117525972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117528643_117530809
ES.3811.47	chr10	-	1813	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	80	1206	7	28	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGGAGAGTAAATATG	NA	False	NA	NA	False	ATTAAA	-43	NA	117546583	117525985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ES.3811.7	chr10	-	7504	10	NIC	ENSMUSG00000020184.16	novel	3145	12	NA	NA	106	4	intron_retention	FALSE	canonical	3	473	junction_6	30.2732412503595	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTCTTACACATTTT	NA	False	NA	-15	True	AATAAA	-25	NA	117546091	117524795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117545690_117545850
ES.38110.1	ERCC-00059	+	499	1	FSM	ERCC-00059A	DQ668356	509	1	2	8	2	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGATT	NA	False	NA	NA	False	NA	NA	NA	2	501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00059_+_0_500
ES.38111.1	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00060_+_0_500
ES.38111.2	ERCC-00060	+	219	1	FSM	ERCC-00060A	DQ516763	506	1	1	286	1	-286	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACAAGCTAAACTTACA	NA	False	NA	NA	False	TATAAA	-15	NA	1	220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00060_+_0_200
ES.38112.1	ERCC-00062	+	1005	1	FSM	ERCC-00062A	DQ516786	1007	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	AATACA	-35	NA	1	1006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00062_+_0_1000
ES.38113.1	ERCC-00069	+	1119	1	FSM	ERCC-00069A	DQ459421	1121	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00069_+_0_1100
ES.38114.1	ERCC-00071	+	623	1	FSM	ERCC-00071A	DQ883654	626	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TT	NA	False	NA	NA	False	NA	NA	NA	1	624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00071_+_0_600
ES.38115.1	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5637	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00074_+_0_500
ES.38115.2	ERCC-00074	+	349	1	FSM	ERCC-00074A	DQ516754	506	1	0	157	0	-157	mono-exon	FALSE	NA	NA	NA	NA	NA	5594	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGGATATATTCCTT	NA	False	NA	NA	False	TTTAAA	-34	NA	0	349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00074_+_0_300
ES.38115.3	ERCC-00074	+	155	1	FSM	ERCC-00074A	DQ516754	506	1	0	351	0	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	5478	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACTGTAACTAAGTGA	NA	False	NA	NA	False	ATTAAA	-35	NA	0	155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00074_+_0_200
ES.38116.1	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00076_+_0_600
ES.38117.1	ERCC-00078	+	976	1	FSM	ERCC-00078A	DQ883673	977	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00078_+_0_1000
ES.38118.1	ERCC-00079	+	626	1	FSM	ERCC-00079A	DQ883652	628	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	C	NA	False	NA	NA	False	NA	NA	NA	1	627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00079_+_0_600
ES.38119.1	ERCC-00084	+	976	1	FSM	ERCC-00084A	DQ883682	978	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00084_+_0_1000
ES.3812.1	chr10	+	2008	1	Intergenic	novelGene_2896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTCAAAGTCATCCTTA	NA	False	NA	NA	False	NA	NA	NA	117546760	117548768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117546800_117548800
ES.3812.2	chr10	+	424	1	Intergenic	novelGene_2897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATTAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	117546816	117547240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117546800_117547200
ES.38120.1	ERCC-00085	+	826	1	FSM	ERCC-00085A	DQ883669	828	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00085_+_0_800
ES.38121.1	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00092_+_0_1100
ES.38122.1	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00095_+_0_500
ES.38123.1	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5925	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00096_+_0_1100
ES.38123.2	ERCC-00096	+	965	1	FSM	ERCC-00096A	DQ459429	1091	1	0	126	0	-126	mono-exon	FALSE	NA	NA	NA	NA	NA	5905	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATCGGGATGCTACT	NA	False	NA	NA	False	NA	NA	NA	0	965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00096_+_0_1000
ES.38123.3	ERCC-00096	+	1022	2	Genic_Genomic	ERCC-00096A	novel	1091	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	1090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00096_+_871_937
ES.38123.4	ERCC-00096	+	201	1	FSM	ERCC-00096A	DQ459429	1091	1	1	889	1	-889	mono-exon	FALSE	NA	NA	NA	NA	NA	5604	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAATATAGATTGGCGC	NA	False	NA	NA	False	AATGAA	-30	NA	1	202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00096_+_0_200
ES.38123.5	ERCC-00096	+	1033	2	Genic_Genomic	ERCC-00096A	novel	1091	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	1091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00096_+_539_595
ES.38124.1	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00108_+_0_1000
ES.38125.1	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00111_+_0_1000
ES.38126.1	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00112_+_0_1100
ES.38127.1	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00113_+_0_800
ES.38128.1	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00116_+_0_2000
ES.38129.1	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4906	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00130_+_0_1100
ES.38129.2	ERCC-00130	+	91	1	FSM	ERCC-00130A	EF011072	1051	1	0	960	0	-960	mono-exon	FALSE	NA	NA	NA	NA	NA	4351	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGGAACAGGGCTGAC	NA	False	NA	NA	False	AAAACA	-32	NA	0	91	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00130_+_0_100
ES.38129.3	ERCC-00130	+	286	1	FSM	ERCC-00130A	EF011072	1051	1	1	764	1	-764	mono-exon	FALSE	NA	NA	NA	NA	NA	4528	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGGGCGAGAACGAGAG	NA	False	NA	NA	False	NA	NA	NA	1	287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00130_+_0_300
ES.38129.4	ERCC-00130	+	519	1	FSM	ERCC-00130A	EF011072	1051	1	1	531	1	-531	mono-exon	FALSE	NA	NA	NA	NA	NA	4649	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAGAAAAACGGT	NA	False	NA	NA	False	NA	NA	NA	1	520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00130_+_0_500
ES.38129.5	ERCC-00130	+	832	1	FSM	ERCC-00130A	EF011072	1051	1	1	218	1	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	4804	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAACAGTGCTTCGGC	NA	False	NA	NA	False	NA	NA	NA	1	833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00130_+_0_800
ES.38129.6	ERCC-00130	+	1011	2	Genic_Genomic	ERCC-00130A	novel	1051	1	NA	NA	2	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	4906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	2	1050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00130_+_139_175
ES.38129.7	ERCC-00130	+	915	2	Genic_Genomic	ERCC-00130A	novel	1051	1	NA	NA	2	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00130_+_484_617
ES.38129.8	ERCC-00130	+	556	2	Genic_Genomic	ERCC-00130A	novel	1051	1	NA	NA	2	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00130_+_430_922
ES.38129.9	ERCC-00130	+	968	2	Genic_Genomic	ERCC-00130A	novel	1051	1	NA	NA	4	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGG	NA	False	NA	NA	False	NA	NA	NA	4	1048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_ERCC-00130_+_819_894
ES.3813.1	chr10	+	186	1	Intergenic	novelGene_2898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAATCTCCGGCT	NA	False	NA	NA	False	NA	NA	NA	117562585	117562771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117562600_117562800
ES.38130.1	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00131_+_0_800
ES.38131.1	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00136_+_0_1000
ES.38131.2	ERCC-00136	+	886	1	FSM	ERCC-00136A	EF011063	1025	1	2	137	2	-137	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGATATGATGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	2	888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00136_+_0_900
ES.38132.1	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00145_+_0_1000
ES.38133.1	ERCC-00147	+	1004	1	FSM	ERCC-00147A	DQ516790	1007	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AG	NA	False	NA	NA	False	ATTAAA	-12	NA	1	1005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00147_+_0_1000
ES.38134.1	ERCC-00154	+	520	1	FSM	ERCC-00154A	DQ854997	521	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00154_+_0_500
ES.38135.1	ERCC-00160	+	726	1	FSM	ERCC-00160A	DQ883658	727	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00160_+_0_700
ES.38136.1	ERCC-00163	+	523	1	FSM	ERCC-00163A	DQ668359	527	1	3	1	3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	3	526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00163_+_0_500
ES.38137.1	ERCC-00165	+	854	1	FSM	ERCC-00165A	DQ668363	856	1	1	1	1	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	NA	NA	NA	1	855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00165_+_0_900
ES.38138.1	ERCC-00170	+	1005	1	FSM	ERCC-00170A	DQ516773	1007	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00170_+_0_1000
ES.38139.1	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	676	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_ERCC-00171_+_0_500
ES.3814.1	chr10	-	3734	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-44	197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.0613955098562	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACGATAAGGACCCTC	NA	False	NA	NA	False	NA	NA	NA	117582314	117569386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117572139_117576416_117576500_117576657_117576817_117580637_117580753_117581689
ES.3814.10	chr10	-	3461	4	NIC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-87	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	29.5108266385218	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATACAGGCTGATAAGC	NA	False	NA	NA	False	AATAAA	-15	NA	117582357	117569587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117572139_117576416_117576500_117576657_117576817_117581689
ES.3814.11	chr10	-	5530	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-45	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.7815340893439	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATACAGGCTGATAAGC	NA	False	NA	NA	False	AATAAA	-15	NA	117582315	117569587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117572237_117574514_117576500_117576657_117576817_117580789_117580901_117581689
ES.3814.12	chr10	-	3323	6	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-47	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8025208748989	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCATACAGGCTGATAAG	NA	False	NA	NA	False	AATAAA	-14	NA	117582317	117569588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117571855_117572062_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
ES.3814.14	chr10	-	3070	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-66	485	-66	-485	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTGTCTGCTGTGT	NA	False	NA	NA	False	ACTAAA	-15	NA	117582336	117570068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
ES.3814.15	chr10	-	5350	1	Genic_Genomic	ENSMUSG00000060181.7	novel	NA	NA	NA	NA	-43	-5159	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACCACATTCCAAGTCCC	NA	False	NA	NA	False	NA	NA	NA	117582313	117576963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117577000_117582300
ES.3814.16	chr10	-	1080	1	Genic_Genomic	ENSMUSG00000060181.7	novel	NA	NA	NA	NA	-45	-9431	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATAACATTAGCACTT	NA	False	NA	NA	False	CATAAA	-11	NA	117582315	117581235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117581200_117582300
ES.3814.2	chr10	-	7757	3	ISM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	496	-2	496	2	intron_retention	FALSE	canonical	3	58	junction_1	5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCTGATAAGCAGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	117581774	117569581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117572139_117576416_117576500_117576657
ES.3814.3	chr10	-	5506	1	Genic_Genomic	ENSMUSG00000060181.7	novel	NA	NA	NA	NA	5760	2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCTGATAAGCAGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	117575087	117569581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_117569600_117575100
ES.3814.4	chr10	-	3569	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	-78	-2	-78	2	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCTGATAAGCAGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	117582348	117569581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
ES.3814.6	chr10	-	3538	5	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.0613955098562	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGCTGATAAGCAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	117582310	117569583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117572139_117576416_117576500_117576657_117576817_117580632_117580753_117581689
ES.3814.7	chr10	-	4483	6	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8277643947636	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGGCTGATAAGCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	117582296	117569584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117572237_117575459_117575705_117575790_117576500_117576657_117576817_117580789_117580901_117581689
ES.3814.9	chr10	-	4486	6	NNC	ENSMUSG00000060181.7	novel	3489	5	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6383182652359	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATACAGGCTGATAAGC	NA	False	NA	NA	False	AATAAA	-15	NA	117582293	117569587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117572237_117575459_117575705_117575790_117576500_117576657_117576817_117580632_117580753_117581689
ES.38140.1	SIRV1	+	701	3	FSM	SIRV1B	SIRV108	702	3	1	0	1	0	multi-exon	FALSE	canonical	3	89	junction_1	13	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10583	11606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_+_10792_10897_11188_11403
ES.38140.2	SIRV1	+	467	3	FSM	SIRV1B	SIRV109	464	3	-2	-1	-2	1	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCGGCTAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	10709	11644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_+_10792_10882_11058_11434
ES.38141.1	SIRV1	-	1563	6	FSM	SIRV1A	SIRV101	1561	6	-1	-1	-1	1	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10787	999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
ES.38141.10	SIRV1	-	880	3	NNC	SIRV1A	novel	1363	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	452.5	1062	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCGATGCATACTTCCT	NA	False	NA	NA	False	NA	NA	NA	10785	1001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV1_-_1485_7552_7812_10647
ES.38141.14	SIRV1	-	1302	4	FSM	SIRV1A	SIRV102	1300	4	-1	-1	-1	1	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAATCGATGCATACT	NA	False	NA	NA	False	NA	NA	NA	10367	1005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
ES.38141.15	SIRV1	-	1173	4	NNC	SIRV1A	novel	1300	4	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	2470.17682677892	1045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10361	1006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV1_-_1485_6337_6787_7647_7815_10282
ES.38141.16	SIRV1	-	1169	4	NNC	SIRV1A	novel	1300	4	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	2470.17682677892	1045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTGAATCGATGCATA	NA	False	NA	NA	False	NA	NA	NA	10365	1007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV1_-_1485_6337_6787_7654_7815_10282
ES.38141.19	SIRV1	-	671	5	FSM	SIRV1A	SIRV105	670	5	0	-1	0	1	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGAAGTCAAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	10640	6448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
ES.38141.2	SIRV1	-	1364	6	FSM	SIRV1A	SIRV103	1363	6	0	-1	0	1	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10791	999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
ES.38141.23	SIRV1	-	741	3	FSM	SIRV1A	SIRV107	744	3	3	0	3	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11640	10647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_10792_10882_11243_11403
ES.38141.3	SIRV1	-	975	3	FSM	SIRV1A	SIRV106	973	3	-1	-1	-1	1	multi-exon	FALSE	canonical	2	497	junction_2	204	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGATGCATACTTCCTTC	NA	False	NA	NA	False	NA	NA	NA	10787	999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV1_-_1485_7552_7809_10553
ES.38141.9	SIRV1	-	1122	4	NNC	SIRV1A	novel	1300	4	NA	NA	2561	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2523.73272928987	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCGATGCATACTTCCT	NA	False	NA	NA	False	NA	NA	NA	7805	1001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV1_-_1485_6337_6464_6553_6814_7552
ES.38142.1	SIRV2	+	524	1	FSM	SIRV2B	SIRV205	523	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTCTACCGCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	1108	1632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV2_+_1100_1600
ES.38143.1	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV2_+_4000_4500
ES.38144.1	SIRV2	-	2052	11	FSM	SIRV2A	SIRV201	2051	11	1	-2	1	2	multi-exon	FALSE	canonical	3	240	junction_6	997.649657946115	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAACGTGGCATGCGTA	NA	False	NA	NA	False	NA	NA	NA	5906	998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
ES.38144.4	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
ES.38144.6	SIRV2	-	687	5	FSM	SIRV2A	SIRV203	686	5	0	-1	0	1	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGACGTGGACGTTTCA	NA	False	NA	NA	False	NA	NA	NA	5895	3664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
ES.38145.1	SIRV3	+	2375	3	FSM	SIRV3A	SIRV306	2373	3	-1	-1	-1	1	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAACAGTAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	1943	8293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4003_4081_6057
ES.38145.12	SIRV3	+	1084	8	FSM	SIRV3A	SIRV304	1083	8	-1	0	-1	0	multi-exon	FALSE	canonical	3	1134	junction_6	907.203057620014	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1962	8937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
ES.38145.13	SIRV3	+	782	5	FSM	SIRV3A	SIRV307	779	5	-1	-2	-1	2	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACGTCTCGTAAGACGG	NA	False	NA	NA	False	NA	NA	NA	1962	8941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
ES.38145.14	SIRV3	+	1808	2	FSM	SIRV3A	SIRV302	1807	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	834	junction_1	0	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1962	7822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_6057
ES.38145.15	SIRV3	+	2019	3	FSM	SIRV3A	SIRV303	2018	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1857	junction_1	482	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1962	7822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4568_4780_6057
ES.38145.19	SIRV3	+	1081	8	NNC	SIRV3A	novel	1083	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1038.66829966775	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGTTAACGTCTCGTAA	NA	False	NA	NA	False	NA	NA	NA	1964	8936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV3_+_2006_4003_4087_4574_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
ES.38145.2	SIRV3	+	2469	5	FSM	SIRV3A	SIRV301	2467	5	-1	-1	-1	1	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAACGTCTCGTAAGACG	NA	False	NA	NA	False	NA	NA	NA	1943	8940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
ES.38145.21	SIRV3	+	1072	8	NNC	SIRV3A	novel	1083	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1172.45052982971	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTAGGTTAACGTCTCGTA	NA	False	NA	NA	False	NA	NA	NA	1964	8935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8200_8755
ES.38145.23	SIRV3	+	1079	8	NNC	SIRV3A	novel	1083	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1147.84278593564	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1964	8937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7370_7878_7989_8124_8208_8755
ES.38145.24	SIRV3	+	1079	8	NNC	SIRV3A	novel	1083	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1321.52430541247	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGTTAACGTCTCGTAA	NA	False	NA	NA	False	NA	NA	NA	1964	8936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7874_8002_8137_8208_8755
ES.38145.30	SIRV3	+	1063	8	NNC	SIRV3A	novel	1083	8	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1143.05041222947	1201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGTTAACGTCTCGTAA	NA	False	NA	NA	False	NA	NA	NA	1967	8936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7987_8137_8208_8755
ES.38145.32	SIRV3	+	2314	2	ISM	SIRV3A	SIRV306	2373	3	2058	-1	-1	1	3prime_fragment	FALSE	canonical	3	759	junction_1	0	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTAACAGTAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	4002	8293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV3_+_4081_6057
ES.38145.33	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_4081_4568_4780_6570
ES.38145.34	SIRV3	+	1977	2	ISM	SIRV3A	SIRV303	2018	3	2604	0	564	0	3prime_fragment	FALSE	canonical	3	2821	junction_1	0	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	4567	7822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV3_+_4780_6057
ES.38145.35	SIRV3	+	1766	1	NIC	SIRV3A	novel	2467	5	NA	NA	2053	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	6056	7822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_SIRV3_+_6100_7800
ES.38145.36	SIRV3	+	754	5	ISM	SIRV3A	SIRV304	1083	8	4093	0	2053	0	3prime_fragment	FALSE	canonical	3	1134	junction_3	466.221513875111	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	6056	8937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV3_+_6334_7270_7367_7872_7989_8124_8208_8755
ES.38145.8	SIRV3	+	1431	3	FSM	SIRV3A	SIRV303	2018	3	-18	605	1	499	multi-exon	FALSE	canonical	3	1857	junction_1	482	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAGAAAGAATAAT	NA	False	NA	NA	False	NA	NA	NA	1945	7217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_+_2006_4568_4780_6057
ES.38146.1	SIRV3	-	481	3	FSM	SIRV3B	SIRV308	479	3	0	-2	0	2	multi-exon	FALSE	canonical	3	5391	junction_1	17	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTATGGCGGACA	NA	False	NA	NA	False	NA	NA	NA	1982	998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_-_1168_1532_1765_1902
ES.38147.1	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_-_4600_4800
ES.38148.1	SIRV3	-	590	3	FSM	SIRV3C	SIRV310	589	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1245	junction_2	66	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGTTTTGGGTACTG	NA	False	NA	NA	False	NA	NA	NA	9914	8758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_-_8967_9189_9325_9667
ES.38148.2	SIRV3	-	797	3	FSM	SIRV3C	SIRV309	796	3	0	-1	0	1	multi-exon	FALSE	canonical	3	1394	junction_2	16	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAAATATCTGTGTCC	NA	False	NA	NA	False	CATAAA	-22	NA	9943	8796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV3_-_8976_9189_9299_9434
ES.38149.1	SIRV4	+	1568	3	FSM	SIRV4C	SIRV409	1567	3	-1	0	-1	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	999	3403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_+_1347_1678_1886_2389
ES.38149.5	SIRV4	+	952	2	FSM	SIRV4C	SIRV410	950	2	-1	-1	-1	1	multi-exon	FALSE	canonical	3	1621	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATATGTTGTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	1454	2772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_+_1886_2251
ES.3815.1	chr10	+	177	1	Intergenic	novelGene_2901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117607947	117608124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117607900_117608100
ES.38150.1	SIRV4	-	618	2	FSM	SIRV4B	SIRV406	617	2	0	-1	0	1	multi-exon	FALSE	canonical	3	2584	junction_1	0	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAAAATAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	5158	3636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_-_4104_5007
ES.38151.1	SIRV4	-	594	4	FSM	SIRV4A	SIRV404	592	4	-1	-1	-1	1	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATATTTAGAGCGTAT	NA	False	NA	NA	False	NA	NA	NA	14624	8321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
ES.38151.13	SIRV4	-	627	2	FSM	SIRV4A	SIRV405	626	2	-1	0	-1	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13938	8629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_-_8991_13672
ES.38151.2	SIRV4	-	673	4	FSM	SIRV4A	SIRV403	670	4	-2	-1	-2	1	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATATTTAGAGCGTAT	NA	False	NA	NA	False	NA	NA	NA	15124	8321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
ES.38151.3	SIRV4	-	573	5	FSM	SIRV4A	SIRV408	570	5	-2	-1	-2	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15124	8322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
ES.38151.9	SIRV4	-	569	5	NNC	SIRV4A	novel	570	5	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2658.88059152719	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTGATATTTAGAGCG	NA	False	NA	NA	False	NA	NA	NA	15121	8324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV4_-_8373_8629_8748_8846_8991_13672_13823_15012
ES.38152.1	SIRV5	+	2032	16	FSM	SIRV5A	SIRV505	2029	16	-1	-2	-1	2	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	999	10993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.102	SIRV5	+	2007	16	NNC	SIRV5A	novel	2029	16	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	2926.65158993839	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1012	10989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5608_6100_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.103	SIRV5	+	2097	17	NNC	SIRV5A	novel	2085	17	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_2	3713.23298687865	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1012	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2036_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5639_6109_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.104	SIRV5	+	1988	18	FSM	SIRV5A	SIRV502	1984	18	0	-4	0	2	multi-exon	FALSE	canonical	3	681	junction_4	3430.92271124242	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	1019	10993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.106	SIRV5	+	1992	18	NNC	SIRV5A	novel	1984	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3709.48893130683	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1980_2034_2119_2157_2270_2489_3297_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.117	SIRV5	+	1903	16	NNC	SIRV5A	novel	1984	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3436.94687121514	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGGTTTACCGCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	1020	10986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_2264_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.118	SIRV5	+	1936	17	NNC	SIRV5A	novel	1984	18	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3995.22342929654	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTTTACCGCCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	1020	10988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5448_5543_5627_6111_6170_6327_6453_6805_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.124	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	3147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
ES.38152.136	SIRV5	+	2461	18	NNC	SIRV5A	novel	2474	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3406.48759023457	3748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1029	11867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3310_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.142	SIRV5	+	2467	18	NNC	SIRV5A	novel	2474	18	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	3134.76307609564	3748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAATAGTAACCTTGGTA	NA	False	NA	NA	False	AGTAAA	-8	NA	1029	11864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10986_11130
ES.38152.143	SIRV5	+	2251	15	NNC	SIRV5A	novel	2474	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3162.75492882327	3748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	1029	11866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1089_3330_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.146	SIRV5	+	2286	15	NNC	SIRV5A	novel	2474	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3162.75492882327	3748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1029	11867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1091_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.149	SIRV5	+	2461	18	NNC	SIRV5A	novel	2474	18	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3709.33406011782	3748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	1030	11866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1143_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6829_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.150	SIRV5	+	2467	18	NNC	SIRV5A	novel	2474	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	3460.39348523609	3748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1033	11867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6951_7139_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.151	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.154	SIRV5	+	2368	18	NNC	SIRV5A	novel	2474	18	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3864.90015448682	3748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAATAGTAACCTTGGTA	NA	False	NA	NA	False	AGTAAA	-8	NA	1094	11864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6109_6170_6327_6431_6843_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.156	SIRV5	+	2357	17	NNC	SIRV5A	novel	2474	18	NA	NA	925	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	3120.10688669074	3747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCAATAGTAACCTTGGT	NA	False	NA	NA	False	AGTAAA	-7	NA	1981	11863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8275_8382_8454_8586_10858_10992_11133
ES.38152.157	SIRV5	+	1939	16	NNC	SIRV5A	novel	2085	17	NA	NA	925	1	intron_retention	FALSE	non_canonical	0	0	junction_15	3141.05027445704	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTACCGCCAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	1981	10990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8581_10863
ES.38152.159	SIRV5	+	1885	15	NNC	SIRV5A	novel	2029	16	NA	NA	925	0	intron_retention	FALSE	non_canonical	0	0	junction_6	2889.31314572887	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1981	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5448_5541_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.161	SIRV5	+	2460	2	Genic_Genomic	SIRV5A	novel	2474	18	NA	NA	1982	1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGTAAAACATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	3038	13607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV5_+_3046_11154
ES.38152.162	SIRV5	+	1450	13	ISM	SIRV5A	SIRV501	1890	17	2426	0	2426	0	3prime_fragment	FALSE	canonical	3	1808	junction_10	2838.9501972071	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	3482	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV5_+_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.164	SIRV5	+	1804	10	ISM	SIRV5A	SIRV510	2474	18	5082	3	-2091	-2	3prime_fragment	FALSE	canonical	3	1532	junction_9	3076.04536080475	3237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCAATAGTAACCTTGGTA	NA	False	NA	NA	False	AGTAAA	-8	NA	6110	11864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV5_+_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.166	SIRV5	+	519	2	ISM	SIRV5A	SIRV503	526	3	0	149	0	2	5prime_fragment	FALSE	canonical	3	11825	junction_1	0	2957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCGCCAAAAAATGGGAG	NA	False	NA	NA	False	NA	NA	NA	8201	10993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV5_+_8586_10858
ES.38152.167	SIRV5	+	886	4	FSM	SIRV5A	SIRV509	885	4	0	-1	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	8315	11867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
ES.38152.168	SIRV5	+	880	4	NNC	SIRV5A	novel	885	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5079.78413802091	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8316	11866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_8382_8454_8586_10858_10986_11309
ES.38152.170	SIRV5	+	2475	1	FSM	SIRV5A	SIRV504	2473	1	-1	-1	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGTAAAACATTTGTTA	NA	False	NA	NA	False	NA	NA	NA	11132	13607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_11100_13600
ES.38152.26	SIRV5	+	1952	15	NNC	SIRV5A	novel	2029	16	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	2897.15273314744	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2135_3307_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.30	SIRV5	+	1768	17	ISM	SIRV5A	SIRV510	2474	18	-27	875	1	1	5prime_fragment	FALSE	canonical	3	1808	junction_14	2534.15329794786	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCGCCAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	1001	10992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
ES.38152.31	SIRV5	+	1839	13	NNC	SIRV5A	novel	2029	16	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	3341.92138991762	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1091_3298_3405_3483_3641_5379_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.35	SIRV5	+	2022	16	NNC	SIRV5A	novel	2029	16	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_7	2924.55690091109	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1001	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5445_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.36	SIRV5	+	2016	16	NNC	SIRV5A	novel	2029	16	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	2907.58214940792	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1001	10989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3395_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.38	SIRV5	+	2017	16	NNC	SIRV5A	novel	2029	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	3392.76577833877	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1002	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1985_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6441_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.39	SIRV5	+	2010	16	NNC	SIRV5A	novel	2029	16	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	3516.80376604793	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGGTTTACCGCCAAAA	NA	False	NA	NA	False	NA	NA	NA	1002	10985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6335_6450_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.43	SIRV5	+	2028	16	NNC	SIRV5A	novel	2029	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	2932.40505311861	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1002	10989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3641_5374_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.53	SIRV5	+	2501	18	FSM	SIRV5A	SIRV510	2474	18	-26	-1	2	1	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	3748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAACCTTGGTAACTT	NA	False	NA	NA	False	AGTAAA	-12	NA	1002	11868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
ES.38152.61	SIRV5	+	2086	17	FSM	SIRV5A	SIRV508	2085	17	0	-1	0	1	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACCGCCAAAAAATGGGA	NA	False	NA	NA	False	NA	NA	NA	1008	10992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.62	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	11478	junction_1	0	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1150_1987
ES.38152.65	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_+_1144_1987
ES.38152.78	SIRV5	+	2078	17	NNC	SIRV5A	novel	2085	17	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	3298.17526255049	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1009	10991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2151_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38152.93	SIRV5	+	2076	17	NNC	SIRV5A	novel	2085	17	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_10	3109.47178429774	3470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1009	10989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6447_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
ES.38153.1	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV5_-_2200_2400
ES.38154.1	SIRV6	+	1447	9	FSM	SIRV6A	SIRV601	1435	9	-1	-11	-1	0	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	999	11837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
ES.38154.12	SIRV6	+	1539	10	FSM	SIRV6A	SIRV604	1537	10	0	-2	0	2	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTAGTTCAATCTTCA	NA	False	NA	NA	False	NA	NA	NA	1087	11839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ES.38154.21	SIRV6	+	1393	10	FSM	SIRV6A	SIRV604	1537	10	1	143	1	4	multi-exon	FALSE	canonical	0	0	junction_4	9140.21704229429	3015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGGGGTTTGCCGATG	NA	False	NA	NA	False	ATTAAA	-9	NA	1088	11694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ES.38154.23	SIRV6	+	1504	10	NNC	SIRV6A	novel	1537	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9551.11471614637	3020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATACTTAGTTCAATCT	NA	False	NA	NA	False	NA	NA	NA	1088	11836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1156_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ES.38154.27	SIRV6	+	575	8	FSM	SIRV6A	SIRV602	574	8	0	-1	0	1	multi-exon	FALSE	canonical	3	8561	junction_3	5767.41567350754	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCCTAATTGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	1124	11280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ES.38154.29	SIRV6	+	499	4	FSM	SIRV6A	SIRV609	485	4	-13	-1	0	1	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGTCAAGCCATTGCC	NA	False	NA	NA	False	NA	NA	NA	1124	2121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
ES.38154.32	SIRV6	+	568	8	NNC	SIRV6A	novel	574	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8692.54531897585	2987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTGCCTAATTGTTGG	NA	False	NA	NA	False	NA	NA	NA	1125	11278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1189_1474_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
ES.38154.38	SIRV6	+	565	8	NNC	SIRV6A	novel	574	8	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	9236.09925393677	2987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTGCCTAATTGTTGG	NA	False	NA	NA	False	NA	NA	NA	1126	11278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11103_11205
ES.38154.39	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	2991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
ES.38154.40	SIRV6	+	575	4	FSM	SIRV6A	SIRV607	574	4	0	-1	0	1	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCAGTCAAGTCGTAGT	NA	False	NA	NA	False	NA	NA	NA	1130	2541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
ES.38154.43	SIRV6	+	1095	9	NNC	SIRV6A	novel	1088	9	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	8239.38325968637	2991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1131	11331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2035_2470_2621_2740_2829_3106_3165_10724_10819_11031
ES.38154.47	SIRV6	+	1092	9	NNC	SIRV6A	novel	1088	9	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	9824.58447912684	2991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAAGAGCAATCAACTC	NA	False	NA	NA	False	NA	NA	NA	1131	11329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11024
ES.38154.5	SIRV6	+	1427	9	NNC	SIRV6A	novel	1435	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9798.7302621309	3020	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1002	11826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3159_10724_10819_11031_11109_11205
ES.38154.54	SIRV6	+	1070	9	NNC	SIRV6A	novel	1088	9	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_4	10141.2029850691	2991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1133	11331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3147_10721_10819_11031
ES.38154.56	SIRV6	+	1073	9	NNC	SIRV6A	novel	1088	9	NA	NA	-1	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	11396.0347901145	2991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAAGAGCAATCAACTC	NA	False	NA	NA	False	NA	NA	NA	1136	11329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_1847_2027_2470_2621_2740_2829_3106_3157_10721_10819_11031
ES.38154.59	SIRV6	+	473	4	NNC	SIRV6A	novel	485	4	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12563.7680476661	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTCACAAGTCAAGCCA	NA	False	NA	NA	False	AATAGA	-42	NA	1138	2116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1729_1845
ES.38154.60	SIRV6	+	478	4	NNC	SIRV6A	novel	485	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11260.4577270297	1717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1138	2120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1181_1468_1535_1640_1736_1845
ES.38154.63	SIRV6	+	455	3	FSM	SIRV6A	SIRV611	454	3	0	-1	0	1	multi-exon	FALSE	canonical	3	2656	junction_1	12443	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGTTTATAGTTTAC	NA	False	NA	NA	False	NA	NA	NA	1303	1951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_1382_1468_1535_1640
ES.38154.64	SIRV6	+	1439	9	ISM	SIRV6A	SIRV604	1537	10	380	0	164	0	3prime_fragment	FALSE	canonical	0	0	junction_3	8930.78069708214	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1467	11837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV6_+_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
ES.38154.66	SIRV6	+	872	6	ISM	SIRV6A	SIRV605	1088	9	714	0	-441	0	3prime_fragment	FALSE	canonical	0	0	junction_1	8267.79932025445	2973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1844	11331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV6_+_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
ES.38154.67	SIRV6	+	546	4	FSM	SIRV6A	SIRV606	545	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	12902	junction_1	3352.72986617705	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2284	10788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
ES.38154.69	SIRV6	+	532	4	FSM	SIRV6A	SIRV616	531	4	0	-1	0	1	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAAAAAGTAATAGTGCA	NA	False	NA	NA	False	NA	NA	NA	2285	10789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
ES.38154.71	SIRV6	+	1164	5	FSM	SIRV6A	SIRV610	1163	5	0	-1	0	1	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAAAATGGGGTTTGCCG	NA	False	NA	NA	False	ATTAAA	-6	NA	2472	11691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
ES.38154.72	SIRV6	+	1159	5	NNC	SIRV6A	novel	1163	5	NA	NA	1	0	intron_retention	FALSE	canonical	1	42	junction_3	8132.93993584116	2632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2473	11690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_2621_2740_2829_3106_3165_10727_11109_11205
ES.38154.75	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	2573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
ES.38154.79	SIRV6	+	378	4	FSM	SIRV6A	SIRV608	377	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3022	11270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
ES.38154.8	SIRV6	+	1414	9	NNC	SIRV6A	novel	1528	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9786.95064789718	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1002	11825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11081_11195
ES.38154.81	SIRV6	+	1312	6	FSM	SIRV6A	SIRV613	1311	6	0	-1	0	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	2528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	3105	11825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
ES.38154.82	SIRV6	+	850	4	FSM	SIRV6A	SIRV608	377	4	82	-555	0	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	2528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	3105	11825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
ES.38154.83	SIRV6	+	1967	1	FSM	SIRV6A	SIRV603	1969	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2465	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGAAGATTTCGACCG	NA	False	NA	NA	False	ATTAAA	-24	NA	8999	10966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_9000_11000
ES.38154.84	SIRV6	+	786	3	FSM	SIRV6A	SIRV615	783	3	-2	-1	-2	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	10235	11331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_10819_11031_11109_11205
ES.38154.86	SIRV6	+	554	1	FSM	SIRV6A	SIRV603	1969	1	1238	177	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGTAATAGTGCAAA	NA	False	NA	NA	False	NA	NA	NA	10237	10791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_+_10200_10800
ES.38155.1	SIRV6	-	277	1	FSM	SIRV6B	SIRV617	276	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTACTTGGGCACCTT	NA	False	NA	NA	False	NA	NA	NA	1820	1543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_-_1500_1800
ES.38156.1	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6_-_2400_2500
ES.38157.1	SIRV7	-	2502	5	FSM	SIRV7A	SIRV703	2498	5	0	-4	0	4	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATATGAATCAACTCTA	NA	False	NA	NA	False	TATAAA	-26	NA	147918	996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
ES.38157.16	SIRV7	-	2451	5	NNC	SIRV7A	novel	2462	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1838.52148478064	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147922	1005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV7_-_2676_2993_3115_43039_43078_114680_114989_147608
ES.38157.2	SIRV7	-	2248	6	FSM	SIRV7A	SIRV702	2247	6	0	-1	0	1	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTTAATATGAATCAACT	NA	False	NA	NA	False	TATAAA	-23	NA	114916	999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
ES.38157.20	SIRV7	-	534	3	ISM	SIRV7A	SIRV703	2498	5	136	2844	136	-2839	5prime_fragment	FALSE	canonical	3	1127	junction_1	1900	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATCATCAAGAATTAA	NA	False	NA	NA	False	TATAAA	-30	NA	147782	3844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV7_-_3897_114680_114989_147608
ES.38157.21	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4944	junction_1	1233	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV7_-_56098_78841_78964_114680
ES.38157.23	SIRV7	-	421	3	NNC	SIRV7A	novel	428	3	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	3705	1615	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114737	55849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV7_-_56098_78847_78964_114680
ES.38157.26	SIRV7	-	913	5	NIC	SIRV7A	novel	889	6	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_3	1736.72714825905	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTAAGAGATCGACGAA	NA	False	NA	NA	False	NA	NA	NA	147958	56034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_SIRV7_-_56098_70883_70988_78841_78964_114686_114961_147608
ES.38157.27	SIRV7	-	943	5	FSM	SIRV7A	SIRV706	949	5	0	6	0	0	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
ES.38157.39	SIRV7	-	934	5	NNC	SIRV7A	novel	949	5	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	2682.90731996094	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147954	56037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV7_-_56086_70877_70988_78841_78964_114680_114989_147608
ES.38157.42	SIRV7	-	911	5	NNC	SIRV7A	novel	889	6	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_3	2066.85127367694	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATCCTAAGAGATCGA	NA	False	NA	NA	False	NA	NA	NA	147954	56038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV7_-_56098_70883_70988_78841_78964_114686_114961_147602
ES.38157.44	SIRV7	-	398	2	ISM	SIRV7A	SIRV708	889	6	3	58871	3	-58871	5prime_fragment	FALSE	canonical	3	2098	junction_1	0	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTTGTAGTAAACCA	NA	False	NA	NA	False	AATAGA	-7	NA	147954	114908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_SIRV7_-_114961_147608
ES.38157.7	SIRV7	-	2503	5	NNC	SIRV7A	novel	2498	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1334.65969445398	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147917	1000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147602
ES.38157.8	SIRV7	-	2466	5	FSM	SIRV7A	SIRV701	2462	5	-2	-2	0	-1	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTGTTAATATGAATCAA	NA	False	NA	NA	False	TATAAA	-21	NA	147925	1001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
ES.38158.1	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	465	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4001_+_0_4000
ES.38158.2	SIRV4001	+	3956	2	Genic_Genomic	SIRV4001A	novel	3997	1	NA	NA	0	-1	multi-exon	TRUE	canonical	0	0	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	3996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4001_+_2522_2561
ES.38158.3	SIRV4001	+	3865	2	Genic_Genomic	SIRV4001A	novel	3997	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	3996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4001_+_2970_3099
ES.38158.4	SIRV4001	+	3950	2	Genic_Genomic	SIRV4001A	novel	3997	1	NA	NA	1	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGT	NA	False	NA	NA	False	NA	NA	NA	1	3994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4001_+_2515_2557
ES.38159.1	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1514	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4002_+_0_4000
ES.38159.2	SIRV4002	+	3564	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_1657_2091
ES.38159.3	SIRV4002	+	2305	1	FSM	SIRV4002A	SIRV4002	3999	1	0	1694	0	-1694	mono-exon	FALSE	NA	NA	NA	NA	NA	1491	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAAACGAACACCCAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	0	2305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4002_+_0_2300
ES.38159.4	SIRV4002	+	3921	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	3998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_1767_1843
ES.38159.5	SIRV4002	+	3674	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	3997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_671_993
ES.38159.6	SIRV4002	+	3812	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_169_355
ES.38159.7	SIRV4002	+	3456	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	1	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGT	NA	False	NA	NA	False	NA	NA	NA	1	3996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_3058_3596
ES.38159.8	SIRV4002	+	3910	2	Genic_Genomic	SIRV4002A	novel	3999	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	3999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4002_+_1162_1249
ES.3816.1	chr10	+	1962	1	Antisense	novelGene_ENSMUSG00000052798.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCCTGAGAATTATTCT	NA	False	NA	NA	False	NA	NA	NA	117619553	117621515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_117619600_117621500
ES.38160.1	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4003_+_0_4000
ES.38160.2	SIRV4003	+	3651	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	0	-2	multi-exon	TRUE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CC	NA	False	NA	NA	False	TATAAA	-43	NA	0	3999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_621_968
ES.38160.3	SIRV4003	+	3654	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_559_905
ES.38160.4	SIRV4003	+	3653	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_433_780
ES.38160.5	SIRV4003	+	3826	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	1	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	1	4001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_899_1072
ES.38160.6	SIRV4003	+	557	1	FSM	SIRV4003A	SIRV4003	4001	1	1	3443	1	-3443	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTATTTATTGTGACT	NA	False	NA	NA	False	NA	NA	NA	1	558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV4003_+_0_600
ES.38160.7	SIRV4003	+	3825	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	1	0	multi-exon	TRUE	canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	1	4001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_564_738
ES.38160.8	SIRV4003	+	3638	2	Genic_Genomic	SIRV4003A	novel	4001	1	NA	NA	1	-14	multi-exon	FALSE	non_canonical	0	0	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTCTAGCC	NA	False	NA	NA	False	TATAAA	-31	NA	1	3987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV4003_+_370_717
ES.38161.1	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	755	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6001_+_0_6000
ES.38161.2	SIRV6001	+	1435	1	FSM	SIRV6001A	SIRV6001	6000	1	0	4565	0	-4565	mono-exon	FALSE	NA	NA	NA	NA	NA	666	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGGAAAAAGTAAAC	NA	False	NA	NA	False	NA	NA	NA	0	1435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6001_+_0_1400
ES.38161.3	SIRV6001	+	640	1	FSM	SIRV6001A	SIRV6001	6000	1	0	5360	0	-5360	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTAGAAGTAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	0	640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6001_+_0_600
ES.38161.4	SIRV6001	+	2658	1	FSM	SIRV6001A	SIRV6001	6000	1	0	3342	0	-3342	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCGGTAACTAAGGCGT	NA	False	NA	NA	False	NA	NA	NA	0	2658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6001_+_0_2700
ES.38161.5	SIRV6001	+	5831	2	Genic_Genomic	SIRV6001A	novel	6000	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6001_+_4470_4638
ES.38161.6	SIRV6001	+	1559	2	Genic_Genomic	SIRV6001A	novel	6000	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6001_+_1243_5682
ES.38161.7	SIRV6001	+	1558	2	Genic_Genomic	SIRV6001A	novel	6000	1	NA	NA	1	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	5999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6001_+_1249_5688
ES.38161.8	SIRV6001	+	5942	2	Genic_Genomic	SIRV6001A	novel	6000	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6001_+_2984_3040
ES.38162.1	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	768	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_6000
ES.38162.10	SIRV6002	+	5926	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1596_1669
ES.38162.11	SIRV6002	+	5927	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1582_1654
ES.38162.12	SIRV6002	+	3032	1	FSM	SIRV6002A	SIRV6002	6000	1	0	2968	0	-2968	mono-exon	FALSE	NA	NA	NA	NA	NA	732	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTCAAGTTTTTGT	NA	False	NA	NA	False	TTTAAA	-5	NA	0	3032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_3000
ES.38162.13	SIRV6002	+	3647	1	FSM	SIRV6002A	SIRV6002	6000	1	0	2353	0	-2353	mono-exon	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTTCTTTCCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	0	3647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_3600
ES.38162.14	SIRV6002	+	5960	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	5999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1465_1503
ES.38162.15	SIRV6002	+	5853	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1500_1646
ES.38162.16	SIRV6002	+	5733	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1311_1576
ES.38162.17	SIRV6002	+	407	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	5999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_203_5793
ES.38162.18	SIRV6002	+	3750	1	FSM	SIRV6002A	SIRV6002	6000	1	1	2249	1	-2249	mono-exon	FALSE	NA	NA	NA	NA	NA	742	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACGTTTCAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	1	3751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_3800
ES.38162.19	SIRV6002	+	1677	1	FSM	SIRV6002A	SIRV6002	6000	1	2	4321	2	-4321	mono-exon	FALSE	NA	NA	NA	NA	NA	692	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAACAACAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	2	1679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_1700
ES.38162.2	SIRV6002	+	5381	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1738_2356
ES.38162.3	SIRV6002	+	3166	1	FSM	SIRV6002A	SIRV6002	6000	1	0	2834	0	-2834	mono-exon	FALSE	NA	NA	NA	NA	NA	735	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCGGTTTATGAAATA	NA	False	NA	NA	False	ATTAAA	-3	NA	0	3166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_3200
ES.38162.4	SIRV6002	+	5540	1	FSM	SIRV6002A	SIRV6002	6000	1	0	460	0	-460	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATTTTGGGTCTTTAGT	NA	False	NA	NA	False	TTTAAA	-7	NA	0	5540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_5500
ES.38162.5	SIRV6002	+	5904	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	5999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1552_1646
ES.38162.6	SIRV6002	+	5776	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_1431_1654
ES.38162.8	SIRV6002	+	5902	2	Genic_Genomic	SIRV6002A	novel	6000	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	5999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV6002_+_5817_5913
ES.38162.9	SIRV6002	+	3353	1	FSM	SIRV6002A	SIRV6002	6000	1	0	2647	0	-2647	mono-exon	FALSE	NA	NA	NA	NA	NA	738	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTACCACTTATTACCT	NA	False	NA	NA	False	AATACA	-1	NA	0	3353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6002_+_0_3400
ES.38163.1	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6003_+_0_6000
ES.38163.2	SIRV6003	+	3564	1	FSM	SIRV6003A	SIRV6003	6000	1	0	2436	0	-2436	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTTAACTAGCAAGTTA	NA	False	NA	NA	False	AGTAAA	-26	NA	0	3564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6003_+_0_3600
ES.38163.3	SIRV6003	+	2470	1	FSM	SIRV6003A	SIRV6003	6000	1	0	3530	0	-3530	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGTATGATTCTTCAACGA	NA	False	NA	NA	False	TATAAA	-3	NA	0	2470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6003_+_0_2500
ES.38163.4	SIRV6003	+	2268	1	FSM	SIRV6003A	SIRV6003	6000	1	0	3732	0	-3732	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACAAGTCCGCTTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	0	2268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV6003_+_0_2300
ES.38164.1	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_8000
ES.38164.10	SIRV8001	+	4075	1	FSM	SIRV8001A	SIRV8001	8001	1	0	3926	0	-3926	mono-exon	FALSE	NA	NA	NA	NA	NA	1032	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGTGGGACTATCTGTC	NA	False	NA	NA	False	TTTAAA	-3	NA	0	4075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_4100
ES.38164.11	SIRV8001	+	3802	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_2107_6305
ES.38164.12	SIRV8001	+	3577	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AC	NA	False	NA	NA	False	NA	NA	NA	0	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_229_4650
ES.38164.13	SIRV8001	+	3481	1	FSM	SIRV8001A	SIRV8001	8001	1	0	4520	0	-4520	mono-exon	FALSE	NA	NA	NA	NA	NA	998	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTACAACTAAAACCCCCT	NA	False	NA	NA	False	NA	NA	NA	0	3481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_3500
ES.38164.14	SIRV8001	+	5549	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_2342_4793
ES.38164.15	SIRV8001	+	6671	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_2578_3907
ES.38164.16	SIRV8001	+	5453	1	FSM	SIRV8001A	SIRV8001	8001	1	1	2547	1	-2547	mono-exon	FALSE	NA	NA	NA	NA	NA	1106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTAGGACCAGTTATACA	NA	False	NA	NA	False	TTTAAA	-2	NA	1	5454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_5500
ES.38164.17	SIRV8001	+	5201	1	FSM	SIRV8001A	SIRV8001	8001	1	1	2799	1	-2799	mono-exon	FALSE	NA	NA	NA	NA	NA	1088	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGTTTCTGCTTCATCC	NA	False	NA	NA	False	TATAAA	-42	NA	1	5202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_5200
ES.38164.18	SIRV8001	+	4959	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_274_3314
ES.38164.19	SIRV8001	+	3834	1	FSM	SIRV8001A	SIRV8001	8001	1	1	4166	1	-4166	mono-exon	FALSE	NA	NA	NA	NA	NA	1018	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACACAATCGTCATTGT	NA	False	NA	NA	False	AATGAA	-3	NA	1	3835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_3800
ES.38164.2	SIRV8001	+	2034	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_1039_7005
ES.38164.20	SIRV8001	+	3059	1	FSM	SIRV8001A	SIRV8001	8001	1	1	4941	1	-4941	mono-exon	FALSE	NA	NA	NA	NA	NA	982	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGTTGTTAAAGGGGAGA	NA	False	NA	NA	False	NA	NA	NA	1	3060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_3100
ES.38164.21	SIRV8001	+	910	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	3	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	3	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_257_7344
ES.38164.22	SIRV8001	+	7725	3	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	3	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AC	NA	False	NA	NA	False	NA	NA	NA	3	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_7037_7255_7355_7406
ES.38164.23	SIRV8001	+	7851	1	FSM	SIRV8001A	SIRV8001	8001	1	7	143	7	-143	mono-exon	FALSE	NA	NA	NA	NA	NA	1170	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACACGTAGAAAAACTATC	NA	False	NA	NA	False	TATAAA	-42	NA	7	7858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_7900
ES.38164.3	SIRV8001	+	7055	1	FSM	SIRV8001A	SIRV8001	8001	1	0	946	0	-946	mono-exon	FALSE	NA	NA	NA	NA	NA	1159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTGTTATGTCTTAC	NA	False	NA	NA	False	NA	NA	NA	0	7055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_7100
ES.38164.4	SIRV8001	+	2509	1	FSM	SIRV8001A	SIRV8001	8001	1	0	5492	0	-5492	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGGGGGTGTGGTAGAG	NA	False	NA	NA	False	GATAAA	-14	NA	0	2509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_2500
ES.38164.5	SIRV8001	+	2588	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_1051_6463
ES.38164.6	SIRV8001	+	2612	1	FSM	SIRV8001A	SIRV8001	8001	1	0	5389	0	-5389	mono-exon	FALSE	NA	NA	NA	NA	NA	965	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATCTAGCCGTTCTTG	NA	False	NA	NA	False	AGTAAA	-22	NA	0	2612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_2600
ES.38164.7	SIRV8001	+	6305	1	FSM	SIRV8001A	SIRV8001	8001	1	0	1696	0	-1696	mono-exon	FALSE	NA	NA	NA	NA	NA	1144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTAGATTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	0	6305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_6300
ES.38164.8	SIRV8001	+	4540	1	FSM	SIRV8001A	SIRV8001	8001	1	0	3461	0	-3461	mono-exon	FALSE	NA	NA	NA	NA	NA	1056	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGGTTTTTATAACA	NA	False	NA	NA	False	AAAAAG	-44	NA	0	4540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8001_+_0_4500
ES.38164.9	SIRV8001	+	616	2	Genic_Genomic	SIRV8001A	novel	8001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AC	NA	False	NA	NA	False	NA	NA	NA	0	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8001_+_93_7475
ES.38165.1	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_8000
ES.38165.10	SIRV8002	+	3883	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4117	0	-4117	mono-exon	FALSE	NA	NA	NA	NA	NA	993	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGCCAGGCTTAGTTA	NA	False	NA	NA	False	AAAACA	-21	NA	0	3883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_3900
ES.38165.11	SIRV8002	+	7948	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	7998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_864_913
ES.38165.12	SIRV8002	+	7659	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	1	7998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_222_559
ES.38165.13	SIRV8002	+	4753	1	FSM	SIRV8002A	SIRV8002	8000	1	1	3246	1	-3246	mono-exon	FALSE	NA	NA	NA	NA	NA	1052	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAAATTTATGGTA	NA	False	NA	NA	False	NA	NA	NA	1	4754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_4800
ES.38165.14	SIRV8002	+	3757	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_803_5043
ES.38165.15	SIRV8002	+	1157	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	3	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	3	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_556_7394
ES.38165.16	SIRV8002	+	2558	1	FSM	SIRV8002A	SIRV8002	8000	1	13	5429	13	-5429	mono-exon	FALSE	NA	NA	NA	NA	NA	922	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAACCCGAGCGTCCAA	NA	False	NA	NA	False	AAAAAG	-4	NA	13	2571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_2600
ES.38165.2	SIRV8002	+	3189	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4811	0	-4811	mono-exon	FALSE	NA	NA	NA	NA	NA	949	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCAACCTCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	0	3189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_3200
ES.38165.3	SIRV8002	+	3042	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4958	0	-4958	mono-exon	FALSE	NA	NA	NA	NA	NA	941	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCTCTAAAGTGTAGAA	NA	False	NA	NA	False	AAAAAG	-19	NA	0	3042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_3000
ES.38165.4	SIRV8002	+	2024	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	7999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_473_6447
ES.38165.5	SIRV8002	+	2221	1	FSM	SIRV8002A	SIRV8002	8000	1	0	5779	0	-5779	mono-exon	FALSE	NA	NA	NA	NA	NA	907	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCGACAGCATTAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	0	2221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_2200
ES.38165.6	SIRV8002	+	3392	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4608	0	-4608	mono-exon	FALSE	NA	NA	NA	NA	NA	958	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGGAAGAGGCCTCAG	NA	False	NA	NA	False	ACTAAA	-30	NA	0	3392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_3400
ES.38165.7	SIRV8002	+	7556	2	Genic_Genomic	SIRV8002A	novel	8000	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8002_+_195_638
ES.38165.8	SIRV8002	+	2835	1	FSM	SIRV8002A	SIRV8002	8000	1	0	5165	0	-5165	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTAAAGTGGAGAAGAT	NA	False	NA	NA	False	AAAAAG	-4	NA	0	2835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_2800
ES.38165.9	SIRV8002	+	3582	1	FSM	SIRV8002A	SIRV8002	8000	1	0	4418	0	-4418	mono-exon	FALSE	NA	NA	NA	NA	NA	972	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAGAAAAGGAAAAACCAAC	NA	False	NA	NA	False	AAAAAG	-40	NA	0	3582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8002_+_0_3600
ES.38166.1	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_8000
ES.38166.10	SIRV8003	+	6399	1	FSM	SIRV8003A	SIRV8003	8000	1	0	1601	0	-1601	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGACACCGTAGTTTACCA	NA	False	NA	NA	False	AGTAAA	-35	NA	0	6399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_6400
ES.38166.11	SIRV8003	+	7691	2	Genic_Genomic	SIRV8003A	novel	8000	1	NA	NA	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	7998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8003_+_970_1276
ES.38166.12	SIRV8003	+	6924	1	FSM	SIRV8003A	SIRV8003	8000	1	0	1076	0	-1076	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAACATCTATCTTACA	NA	False	NA	NA	False	NA	NA	NA	0	6924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_6900
ES.38166.13	SIRV8003	+	3033	1	FSM	SIRV8003A	SIRV8003	8000	1	1	4966	1	-4966	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATAACCTTTACATTTT	NA	False	NA	NA	False	NA	NA	NA	1	3034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_3000
ES.38166.14	SIRV8003	+	7336	1	FSM	SIRV8003A	SIRV8003	8000	1	2	662	2	-662	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGTATCTACTGG	NA	False	NA	NA	False	NA	NA	NA	2	7338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_7300
ES.38166.15	SIRV8003	+	4495	2	Genic_Genomic	SIRV8003A	novel	8000	1	NA	NA	3097	0	multi-exon	FALSE	canonical	0	0	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	3097	8000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8003_+_4702_5109
ES.38166.2	SIRV8003	+	1079	2	Genic_Genomic	SIRV8003A	novel	8000	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV8003_+_955_7875
ES.38166.3	SIRV8003	+	6063	1	FSM	SIRV8003A	SIRV8003	8000	1	0	1937	0	-1937	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGTTATTATGTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	0	6063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_6100
ES.38166.4	SIRV8003	+	4915	1	FSM	SIRV8003A	SIRV8003	8000	1	0	3085	0	-3085	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAATTGTCATCATGTGT	NA	False	NA	NA	False	ACTAAA	-2	NA	0	4915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_4900
ES.38166.5	SIRV8003	+	4377	1	FSM	SIRV8003A	SIRV8003	8000	1	0	3623	0	-3623	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACATTATACAAAGCAGCA	NA	False	NA	NA	False	NA	NA	NA	0	4377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_4400
ES.38166.6	SIRV8003	+	5883	1	FSM	SIRV8003A	SIRV8003	8000	1	0	2117	0	-2117	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGGACAAGTTAATAAA	NA	False	NA	NA	False	AAGAAA	-14	NA	0	5883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_5900
ES.38166.7	SIRV8003	+	2680	1	FSM	SIRV8003A	SIRV8003	8000	1	0	5320	0	-5320	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGAACGATAATATAATAC	NA	False	NA	NA	False	AATAAA	-1	NA	0	2680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_2700
ES.38166.8	SIRV8003	+	4484	1	FSM	SIRV8003A	SIRV8003	8000	1	0	3516	0	-3516	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATAAGAAAACATGCGG	NA	False	NA	NA	False	NA	NA	NA	0	4484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_4500
ES.38166.9	SIRV8003	+	5528	1	FSM	SIRV8003A	SIRV8003	8000	1	0	2472	0	-2472	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGACGGGGGTGGATAT	NA	False	NA	NA	False	NA	NA	NA	0	5528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV8003_+_0_5500
ES.38167.1	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_9900
ES.38167.10	SIRV10001	+	5482	1	FSM	SIRV10001A	SIRV10001	9941	1	0	4459	0	-4459	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAAGGACTTTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	0	5482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_5500
ES.38167.11	SIRV10001	+	5499	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_658_5099
ES.38167.12	SIRV10001	+	1636	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	9940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_847_9150
ES.38167.13	SIRV10001	+	3606	1	FSM	SIRV10001A	SIRV10001	9941	1	0	6335	0	-6335	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACACTTTAAACTCAGT	NA	False	NA	NA	False	AAAACA	-37	NA	0	3606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_3600
ES.38167.14	SIRV10001	+	3628	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_90_6402
ES.38167.15	SIRV10001	+	4106	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_3345_9179
ES.38167.16	SIRV10001	+	6640	1	FSM	SIRV10001A	SIRV10001	9941	1	0	3301	0	-3301	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGGCTTGGAGAAGGTA	NA	False	NA	NA	False	NA	NA	NA	0	6640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_6600
ES.38167.17	SIRV10001	+	516	1	FSM	SIRV10001A	SIRV10001	9941	1	1	9424	1	-9424	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAAAAACTTA	NA	False	NA	NA	False	ATTAAA	-31	NA	1	517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_500
ES.38167.18	SIRV10001	+	3160	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	9940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_1450_8228
ES.38167.19	SIRV10001	+	3217	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	9940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_1393_8114
ES.38167.2	SIRV10001	+	3092	1	FSM	SIRV10001A	SIRV10001	9941	1	0	6849	0	-6849	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGAAAGGTCGGTTT	NA	False	NA	NA	False	NA	NA	NA	0	3092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_3100
ES.38167.20	SIRV10001	+	9721	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	1	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_370_588
ES.38167.21	SIRV10001	+	1077	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	5	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	5	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_915_9773
ES.38167.22	SIRV10001	+	3875	1	FSM	SIRV10001A	SIRV10001	9941	1	345	5721	345	-5721	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTTCACTTCATGACACA	NA	False	NA	NA	False	NA	NA	NA	345	4220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_300_4200
ES.38167.23	SIRV10001	+	3511	1	FSM	SIRV10001A	SIRV10001	9941	1	4832	1598	4832	-1598	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGAACGTTATCATTTAAC	NA	False	NA	NA	False	NA	NA	NA	4832	8343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_4800_8300
ES.38167.3	SIRV10001	+	2025	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_334_8249
ES.38167.4	SIRV10001	+	732	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_56_9264
ES.38167.5	SIRV10001	+	1398	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_165_8707
ES.38167.6	SIRV10001	+	409	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_349_9880
ES.38167.7	SIRV10001	+	852	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCT	NA	False	NA	NA	False	NA	NA	NA	0	9938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_791_9876
ES.38167.8	SIRV10001	+	2084	2	Genic_Genomic	SIRV10001A	novel	9941	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10001_+_1730_9586
ES.38167.9	SIRV10001	+	6006	1	FSM	SIRV10001A	SIRV10001	9941	1	0	3935	0	-3935	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGAAGAGGCCTCTAGT	NA	False	NA	NA	False	TTTAAA	-6	NA	0	6006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10001_+_0_6000
ES.38168.1	SIRV10002	+	2785	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_201_7416
ES.38168.10	SIRV10002	+	7568	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_94_2526
ES.38168.11	SIRV10002	+	2664	1	FSM	SIRV10002A	SIRV10002	10001	1	0	7337	0	-7337	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTACCATCCTATTGTA	NA	False	NA	NA	False	NA	NA	NA	0	2664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10002_+_0_2700
ES.38168.12	SIRV10002	+	8401	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	canonical	1	15	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_66_1664
ES.38168.13	SIRV10002	+	974	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_539_9564
ES.38168.14	SIRV10002	+	669	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_421_9750
ES.38168.15	SIRV10002	+	2064	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1895_9830
ES.38168.16	SIRV10002	+	1319	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_437_9117
ES.38168.17	SIRV10002	+	798	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_726_9927
ES.38168.18	SIRV10002	+	1558	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1223_9663
ES.38168.19	SIRV10002	+	4909	1	FSM	SIRV10002A	SIRV10002	10001	1	0	5092	0	-5092	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCTCTGTAACAAGATTA	NA	False	NA	NA	False	NA	NA	NA	0	4909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10002_+_0_4900
ES.38168.2	SIRV10002	+	1019	1	FSM	SIRV10002A	SIRV10002	10001	1	0	8982	0	-8982	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTAACCTATTTAATGT	NA	False	NA	NA	False	NA	NA	NA	0	1019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10002_+_0_1000
ES.38168.20	SIRV10002	+	4071	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_3953_9880
ES.38168.21	SIRV10002	+	9098	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	0	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_8746_9646
ES.38168.22	SIRV10002	+	2911	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-5092	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCTCTGTAACAAGATTA	NA	False	NA	NA	False	NA	NA	NA	0	4909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_102_2099
ES.38168.23	SIRV10002	+	1587	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1243_9654
ES.38168.24	SIRV10002	+	1316	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1257_9940
ES.38168.25	SIRV10002	+	8002	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_102_2099
ES.38168.26	SIRV10002	+	265	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	1	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_39_9771
ES.38168.27	SIRV10002	+	372	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_176_9802
ES.38168.28	SIRV10002	+	693	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_124_9430
ES.38168.29	SIRV10002	+	3216	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_167_6949
ES.38168.3	SIRV10002	+	1220	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1058_9838
ES.38168.30	SIRV10002	+	8715	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	1	-1	multi-exon	TRUE	canonical	1	1	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	1	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_39_1322
ES.38168.31	SIRV10002	+	1349	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	2	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1239_9888
ES.38168.32	SIRV10002	+	7566	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	4	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GT	NA	False	NA	NA	False	NA	NA	NA	4	9999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_66_2494
ES.38168.33	SIRV10002	+	3336	1	FSM	SIRV10002A	SIRV10002	10001	1	3213	3452	3213	-3452	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTAGATGCGACTAAGCAA	NA	False	NA	NA	False	NA	NA	NA	3213	6549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10002_+_3200_6500
ES.38168.4	SIRV10002	+	1009	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_162_9153
ES.38168.5	SIRV10002	+	1654	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_549_8895
ES.38168.6	SIRV10002	+	293	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_162_9868
ES.38168.7	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10002_+_0_10000
ES.38168.8	SIRV10002	+	954	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_39_9085
ES.38168.9	SIRV10002	+	1387	2	Genic_Genomic	SIRV10002A	novel	10001	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	10000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10002_+_1120_9732
ES.38169.1	SIRV10002	-	2749	1	Antisense	novelGene_SIRV10002A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGAGACCGATGACTAA	NA	False	NA	NA	False	NA	NA	NA	4907	2158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_SIRV10002_-_2200_4900
ES.3817.1	chr10	-	3249	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	-9	-126	-9	126	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCGTTTATCATAAAAT	NA	False	NA	NA	False	AATAAA	-26	NA	117628619	117586399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.10	chr10	-	3619	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	3	0	intron_retention	FALSE	canonical	3	716	junction_18	68.6654698197146	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628600	117586525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.13	chr10	-	3155	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	173.769805001662	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628604	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587441_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.14	chr10	-	3027	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-15	-1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	177.824014625457	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628584	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.17	chr10	-	6121	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	716	junction_19	69.7611309012073	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628605	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.18	chr10	-	3552	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-33	-1	intron_retention	FALSE	canonical	3	716	junction_19	68.8964148293027	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628643	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117626464_117628508
ES.3817.22	chr10	-	3380	29	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	228.355612399358	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628604	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620068_117620342_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.24	chr10	-	2962	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_26	170.582763753964	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGAGTTTTCTCTTAT	NA	False	NA	-5	True	AATAAA	-28	NA	117628556	117586526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625961_117628508
ES.3817.29	chr10	-	4622	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	4	1	intron_retention	FALSE	canonical	3	716	junction_18	69.4234498178777	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117628565	117586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.3	chr10	-	3112	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-1158	5	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_27	169.6676813216	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTCTCTTATGTAATA	NA	False	NA	1	True	AATAAA	-34	NA	117629768	117586520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117629673
ES.3817.30	chr10	-	4894	11	ISM	ENSMUSG00000052798.14	ENSMUST00000218576.2	3092	28	22876	2	-8431	1	3prime_fragment	FALSE	canonical	3	789	junction_3	67.8280915255619	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117605693	117586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238
ES.3817.31	chr10	-	3067	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	174.862062039599	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGAGAGTTTTCTCTTA	NA	False	NA	-6	True	AATAAA	-27	NA	117628556	117586527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601944_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.33	chr10	-	1532	12	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	265.407436666753	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATGAGAGTTTTCTCT	NA	False	NA	-8	True	AATAAA	-25	NA	117628587	117586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117625922_117625966_117626371_117626464_117628508
ES.3817.34	chr10	-	6767	26	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	716	junction_18	69.2939708777034	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATGAGAGTTTTCTCT	NA	False	NA	-8	True	AATAAA	-25	NA	117628579	117586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.35	chr10	-	6707	26	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	3	-1	intron_retention	FALSE	canonical	3	716	junction_19	70.7412863892084	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATGAGAGTTTTCTCT	NA	False	NA	-8	True	AATAAA	-25	NA	117628600	117586529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.39	chr10	-	1897	15	NNC	ENSMUSG00000052798.14	novel	3092	28	NA	NA	6	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	237.290412355658	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTTTTGTTCTA	NA	False	NA	-26	True	AATAAA	-7	NA	117628550	117586547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600265_117617857_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.4	chr10	-	3244	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	-128	-2	-128	2	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTTTTCTCTTATGTA	NA	False	NA	-2	True	AATAAA	-31	NA	117628738	117586523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.40	chr10	-	3744	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	16	-19	intron_retention	FALSE	canonical	3	716	junction_18	67.9954423289884	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTTTTGTTCTA	NA	False	NA	-26	True	AATAAA	-7	NA	117628587	117586547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.42	chr10	-	3658	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-13	-19	intron_retention	FALSE	canonical	3	716	junction_19	69.3868859427226	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTTTTGTTCTA	NA	False	NA	-26	True	AATAAA	-7	NA	117628582	117586547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.43	chr10	-	3029	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	0	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.291330145995	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTTTTGTTCTA	NA	False	NA	-26	True	AATAAA	-7	NA	117628556	117586547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587384_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.47	chr10	-	2835	26	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-7	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	179.84129003096	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTTTTGTTCTA	NA	False	NA	-26	True	AATAAA	-7	NA	117628617	117586547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117625878_117625966_117626371_117626464_117628508
ES.3817.49	chr10	-	2975	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	4	135	-3	-132	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	NA	False	NA	-16	True	AATATA	-19	NA	117628606	117586660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.5	chr10	-	3220	28	NNC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	174.505423013669	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTTTTCTCTTATGT	NA	False	NA	-3	True	AATAAA	-30	NA	117628606	117586524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607408_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.53	chr10	-	157	1	Intergenic	novelGene_2899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	117589829	117589672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117589700_117589800
ES.3817.54	chr10	-	172	1	Intergenic	novelGene_2900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	660	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117599607	117599435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117599400_117599600
ES.3817.55	chr10	-	1412	14	ISM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	5	22365	-2	4142	5prime_fragment	FALSE	canonical	3	716	junction_5	61.7561534197775	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGAAGAGCTATGAATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	117628605	117608890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.3817.56	chr10	-	4188	1	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	15	-8180	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGCATGATAAGCTCA	NA	False	NA	NA	False	ATTAAA	-34	NA	117628588	117624400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117624400_117628600
ES.3817.9	chr10	-	3030	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	176.808290522908	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628598	117586525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ES.38170.1	SIRV10002	-	285	1	Antisense	novelGene_SIRV10002A_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCGATGAGATGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	6547	6262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_SIRV10002_-_6300_6500
ES.38171.1	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_10000
ES.38171.10	SIRV10003	+	6634	1	FSM	SIRV10003A	SIRV10003	9970	1	0	3336	0	-3336	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGGAGTGGAAGTCG	NA	False	NA	NA	False	NA	NA	NA	0	6634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_6600
ES.38171.11	SIRV10003	+	508	1	FSM	SIRV10003A	SIRV10003	9970	1	1	9461	1	-9461	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGAGAGGTCAACCTTT	NA	False	NA	NA	False	NA	NA	NA	1	509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_500
ES.38171.12	SIRV10003	+	1671	1	FSM	SIRV10003A	SIRV10003	9970	1	1	8298	1	-8298	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGACAAGACGAACGT	NA	False	NA	NA	False	NA	NA	NA	1	1672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_1700
ES.38171.13	SIRV10003	+	2940	1	FSM	SIRV10003A	SIRV10003	9970	1	1	7029	1	-7029	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATATCAAACATATTTT	NA	False	NA	NA	False	NA	NA	NA	1	2941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_2900
ES.38171.14	SIRV10003	+	1982	1	FSM	SIRV10003A	SIRV10003	9970	1	1	7987	1	-7987	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGGTCGGATAGACG	NA	False	NA	NA	False	AAAAAG	-5	NA	1	1983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_2000
ES.38171.15	SIRV10003	+	6974	1	FSM	SIRV10003A	SIRV10003	9970	1	1	2995	1	-2995	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAACTGACTCTTAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	1	6975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_7000
ES.38171.16	SIRV10003	+	5842	1	FSM	SIRV10003A	SIRV10003	9970	1	1	4127	1	-4127	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTAAGACAAGTCTC	NA	False	NA	NA	False	NA	NA	NA	1	5843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_5800
ES.38171.17	SIRV10003	+	6256	1	FSM	SIRV10003A	SIRV10003	9970	1	1	3713	1	-3713	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGAGGAGGTTTGATCCA	NA	False	NA	NA	False	AAGAAA	-23	NA	1	6257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_6300
ES.38171.18	SIRV10003	+	7171	1	FSM	SIRV10003A	SIRV10003	9970	1	1	2798	1	-2798	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGATCGCTTAATTTTC	NA	False	NA	NA	False	TTTAAA	-42	NA	1	7172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_7200
ES.38171.19	SIRV10003	+	3482	2	Genic_Genomic	SIRV10003A	novel	9970	1	NA	NA	6	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	6	9969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV10003_+_1823_8303
ES.38171.2	SIRV10003	+	621	1	FSM	SIRV10003A	SIRV10003	9970	1	0	9349	0	-9349	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATACAAGAAATGTGG	NA	False	NA	NA	False	ACTAAA	-15	NA	0	621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_600
ES.38171.20	SIRV10003	+	1652	1	FSM	SIRV10003A	SIRV10003	9970	1	3677	4641	3677	-4641	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTCTAGTAGCAAC	NA	False	NA	NA	False	NA	NA	NA	3677	5329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_3700_5300
ES.38171.21	SIRV10003	+	2691	1	FSM	SIRV10003A	SIRV10003	9970	1	5612	1667	5612	-1667	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAGTTCATCGT	NA	False	NA	NA	False	NA	NA	NA	5612	8303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_5600_8300
ES.38171.3	SIRV10003	+	3586	1	FSM	SIRV10003A	SIRV10003	9970	1	0	6384	0	-6384	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTAGAGAGGTGAGATCG	NA	False	NA	NA	False	NA	NA	NA	0	3586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_3600
ES.38171.4	SIRV10003	+	849	1	FSM	SIRV10003A	SIRV10003	9970	1	0	9121	0	-9121	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACTGTTTCAAAACAA	NA	False	NA	NA	False	AAGAAA	-20	NA	0	849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_800
ES.38171.5	SIRV10003	+	1071	1	FSM	SIRV10003A	SIRV10003	9970	1	0	8899	0	-8899	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTGTCGTAGAGAATA	NA	False	NA	NA	False	AGTAAA	-36	NA	0	1071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_1100
ES.38171.6	SIRV10003	+	4289	1	FSM	SIRV10003A	SIRV10003	9970	1	0	5681	0	-5681	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGTCACACTCCCGAGT	NA	False	NA	NA	False	NA	NA	NA	0	4289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_4300
ES.38171.7	SIRV10003	+	4886	1	FSM	SIRV10003A	SIRV10003	9970	1	0	5084	0	-5084	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGCAATAGCCTTCTAA	NA	False	NA	NA	False	GATAAA	-5	NA	0	4886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_4900
ES.38171.8	SIRV10003	+	8632	1	FSM	SIRV10003A	SIRV10003	9970	1	0	1338	0	-1338	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCGAACGCACACGAATTT	NA	False	NA	NA	False	NA	NA	NA	0	8632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_8600
ES.38171.9	SIRV10003	+	4000	1	FSM	SIRV10003A	SIRV10003	9970	1	0	5970	0	-5970	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAGTGGTTTAAGTGAT	NA	False	NA	NA	False	NA	NA	NA	0	4000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV10003_+_0_4000
ES.38172.1	SIRV12001	+	3719	1	FSM	SIRV12001A	SIRV12001	12029	1	0	8310	0	-8310	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGGTCAAGTTGCG	NA	False	NA	NA	False	NA	NA	NA	0	3719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_3700
ES.38172.10	SIRV12001	+	3571	2	Genic_Genomic	SIRV12001A	novel	12029	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	12029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12001_+_1406_9862
ES.38172.11	SIRV12001	+	6050	1	FSM	SIRV12001A	SIRV12001	12029	1	2514	3465	2514	-3465	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGTGAAGGAATGTCCA	NA	False	NA	NA	False	NA	NA	NA	2514	8564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_2500_8600
ES.38172.12	SIRV12001	+	378	1	FSM	SIRV12001A	SIRV12001	12029	1	10872	779	10872	-779	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAGTTAAAGAGAACA	NA	False	NA	NA	False	NA	NA	NA	10872	11250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_10900_11200
ES.38172.2	SIRV12001	+	1324	1	FSM	SIRV12001A	SIRV12001	12029	1	0	10705	0	-10705	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATATAGAACTGCTG	NA	False	NA	NA	False	AAAAAG	-34	NA	0	1324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_1300
ES.38172.3	SIRV12001	+	8061	1	FSM	SIRV12001A	SIRV12001	12029	1	0	3968	0	-3968	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCGTGTGACATAGG	NA	False	NA	NA	False	NA	NA	NA	0	8061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_8100
ES.38172.4	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_12000
ES.38172.5	SIRV12001	+	5850	1	FSM	SIRV12001A	SIRV12001	12029	1	0	6179	0	-6179	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGTTTTAAGTAACACTT	NA	False	NA	NA	False	AATAGA	-42	NA	0	5850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_5800
ES.38172.6	SIRV12001	+	4438	1	FSM	SIRV12001A	SIRV12001	12029	1	0	7591	0	-7591	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAGGAATAAGCACT	NA	False	NA	NA	False	NA	NA	NA	0	4438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_4400
ES.38172.7	SIRV12001	+	4326	1	FSM	SIRV12001A	SIRV12001	12029	1	0	7703	0	-7703	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTAAGAAGTCAAAGTTG	NA	False	NA	NA	False	AATAAA	-23	NA	0	4326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_4300
ES.38172.8	SIRV12001	+	3999	1	FSM	SIRV12001A	SIRV12001	12029	1	1	8029	1	-8029	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGCACAGGATCGACGAG	NA	False	NA	NA	False	NA	NA	NA	1	4000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_4000
ES.38172.9	SIRV12001	+	2616	1	FSM	SIRV12001A	SIRV12001	12029	1	1	9412	1	-9412	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATTCGATACGTTATAGC	NA	False	NA	NA	False	NA	NA	NA	1	2617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12001_+_0_2600
ES.38173.1	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12002_+_0_12000
ES.38173.10	SIRV12002	+	6210	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AG	NA	False	NA	NA	False	AAGAAA	-34	NA	0	11997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_6175_11961
ES.38173.11	SIRV12002	+	1426	1	FSM	SIRV12002A	SIRV12002	11999	1	1	10572	1	-10572	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTACTCTAGGAGGAGGTG	NA	False	NA	NA	False	NA	NA	NA	1	1427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12002_+_0_1400
ES.38173.12	SIRV12002	+	3167	1	FSM	SIRV12002A	SIRV12002	11999	1	4462	4370	4462	-4370	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGGAAGTTGAAGTTG	NA	False	NA	NA	False	NA	NA	NA	4462	7629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12002_+_4500_7600
ES.38173.2	SIRV12002	+	1866	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAG	NA	False	NA	NA	False	AAGAAA	-31	NA	0	11994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_492_10619
ES.38173.3	SIRV12002	+	235	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_171_11934
ES.38173.4	SIRV12002	+	2303	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AG	NA	False	NA	NA	False	AAGAAA	-34	NA	0	11997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_2006_11699
ES.38173.5	SIRV12002	+	3295	1	FSM	SIRV12002A	SIRV12002	11999	1	0	8704	0	-8704	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAAAGGTTCTCGGTAA	NA	False	NA	NA	False	NA	NA	NA	0	3295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12002_+_0_3300
ES.38173.6	SIRV12002	+	3736	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AG	NA	False	NA	NA	False	AAGAAA	-34	NA	0	11997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_1631_9891
ES.38173.7	SIRV12002	+	6317	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AG	NA	False	NA	NA	False	AAGAAA	-34	NA	0	11997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_4109_9788
ES.38173.8	SIRV12002	+	5253	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	G	NA	False	NA	NA	False	AAGAAA	-35	NA	0	11998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_4902_11646
ES.38173.9	SIRV12002	+	3723	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12002_+_354_8629
ES.38174.1	SIRV12003	+	12000	1	FSM	SIRV12003A	SIRV12003	12000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_12000
ES.38174.10	SIRV12003	+	4124	2	Genic_Genomic	SIRV12003A	novel	12000	1	NA	NA	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	0	11999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12003_+_4013_11887
ES.38174.11	SIRV12003	+	5059	1	FSM	SIRV12003A	SIRV12003	12000	1	0	6941	0	-6941	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGGTAGTAGTTATCTTT	NA	False	NA	NA	False	AATAAA	-5	NA	0	5059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_5100
ES.38174.12	SIRV12003	+	3132	1	FSM	SIRV12003A	SIRV12003	12000	1	0	8868	0	-8868	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTTTTAGAGGAGTAGC	NA	False	NA	NA	False	NA	NA	NA	0	3132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_3100
ES.38174.13	SIRV12003	+	6779	1	FSM	SIRV12003A	SIRV12003	12000	1	0	5221	0	-5221	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATGAACGTATCGGGC	NA	False	NA	NA	False	NA	NA	NA	0	6779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_6800
ES.38174.14	SIRV12003	+	4129	1	FSM	SIRV12003A	SIRV12003	12000	1	1	7870	1	-7870	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAAAGACTTATATAG	NA	False	NA	NA	False	NA	NA	NA	1	4130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_4100
ES.38174.15	SIRV12003	+	2522	1	FSM	SIRV12003A	SIRV12003	12000	1	1	9477	1	-9477	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGGAGGACGAGGACA	NA	False	NA	NA	False	TATAAA	-8	NA	1	2523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_2500
ES.38174.16	SIRV12003	+	11929	2	Genic_Genomic	SIRV12003A	novel	12000	1	NA	NA	1	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	1	12000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12003_+_6390_6459
ES.38174.17	SIRV12003	+	4550	1	FSM	SIRV12003A	SIRV12003	12000	1	1	7449	1	-7449	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTAATTAAACTCTCGC	NA	False	NA	NA	False	ACTAAA	-3	NA	1	4551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_4600
ES.38174.18	SIRV12003	+	4838	1	FSM	SIRV12003A	SIRV12003	12000	1	1	7161	1	-7161	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCATGAGGCACGTTAAG	NA	False	NA	NA	False	NA	NA	NA	1	4839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_4800
ES.38174.19	SIRV12003	+	8737	1	FSM	SIRV12003A	SIRV12003	12000	1	1	3262	1	-3262	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTACTTCAACCTGGAAC	NA	False	NA	NA	False	TATAAA	-17	NA	1	8738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_8700
ES.38174.2	SIRV12003	+	3770	1	FSM	SIRV12003A	SIRV12003	12000	1	0	8230	0	-8230	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACGCACCGATTTCT	NA	False	NA	NA	False	CATAAA	-20	NA	0	3770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_3800
ES.38174.20	SIRV12003	+	6046	1	FSM	SIRV12003A	SIRV12003	12000	1	2	5952	2	-5952	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTTCGACACGAAATAAG	NA	False	NA	NA	False	NA	NA	NA	2	6048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_6000
ES.38174.21	SIRV12003	+	7385	1	FSM	SIRV12003A	SIRV12003	12000	1	159	4456	159	-4456	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGAGTATCGAACTTA	NA	False	NA	NA	False	TATAAA	-21	NA	159	7544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_200_7500
ES.38174.22	SIRV12003	+	3648	1	FSM	SIRV12003A	SIRV12003	12000	1	2619	5733	2619	-5733	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAAGCGCTACTATAGA	NA	False	NA	NA	False	AAGAAA	-37	NA	2619	6267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_2600_6300
ES.38174.23	SIRV12003	+	4955	2	Genic_Genomic	SIRV12003A	novel	12000	1	NA	NA	6796	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	T	NA	False	NA	NA	False	NA	NA	NA	6796	11999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_SIRV12003_+_9332_9579
ES.38174.24	SIRV12003	+	2698	1	FSM	SIRV12003A	SIRV12003	12000	1	7141	2161	7141	-2161	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAATTCCTTTTACA	NA	False	NA	NA	False	NA	NA	NA	7141	9839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_7100_9800
ES.38174.3	SIRV12003	+	1508	1	FSM	SIRV12003A	SIRV12003	12000	1	0	10492	0	-10492	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAAGCATTAGGC	NA	False	NA	NA	False	AATATA	-24	NA	0	1508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_1500
ES.38174.4	SIRV12003	+	871	1	FSM	SIRV12003A	SIRV12003	12000	1	0	11129	0	-11129	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTGCTTAAATTTATAA	NA	False	NA	NA	False	NA	NA	NA	0	871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_900
ES.38174.5	SIRV12003	+	1729	1	FSM	SIRV12003A	SIRV12003	12000	1	0	10271	0	-10271	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGAAGAAAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	0	1729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_1700
ES.38174.6	SIRV12003	+	3237	1	FSM	SIRV12003A	SIRV12003	12000	1	0	8763	0	-8763	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAGCACATAACGGCCT	NA	False	NA	NA	False	NA	NA	NA	0	3237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_3200
ES.38174.7	SIRV12003	+	5813	1	FSM	SIRV12003A	SIRV12003	12000	1	0	6187	0	-6187	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGGCAAAATGGCCTCAA	NA	False	NA	NA	False	NA	NA	NA	0	5813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_5800
ES.38174.8	SIRV12003	+	3516	1	FSM	SIRV12003A	SIRV12003	12000	1	0	8484	0	-8484	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGGTAAACCGAGAAT	NA	False	NA	NA	False	TATAAA	-5	NA	0	3516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_3500
ES.38174.9	SIRV12003	+	3414	1	FSM	SIRV12003A	SIRV12003	12000	1	0	8586	0	-8586	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATACTCTCTCGTTTCA	NA	False	NA	NA	False	NA	NA	NA	0	3414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_SIRV12003_+_0_3400
ES.3818.1	chr10	+	134	1	Intergenic	novelGene_2902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	3246	False	NA	NA	False	NA	NA	NA	117632745	117632879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117632700_117632900
ES.3819.1	chr10	+	158	1	Intergenic	novelGene_2903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAATAAATCTA	3906	False	NA	NA	False	NA	NA	NA	117633405	117633563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117633400_117633600
ES.382.1	chr1	-	3066	1	Genic_Genomic	ENSMUSG00000100764.2	novel	NA	NA	NA	NA	1746	2920	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAAAATTATATG	NA	False	NA	NA	False	NA	NA	NA	43781266	43778200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_43778200_43781300
ES.3820.1	chr10	-	3631	1	Intergenic	novelGene_2904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117646329	117642698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117642700_117646300
ES.3821.1	chr10	-	2692	7	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	13	50	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	335.645977515331	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCTGAAGTCAGTGTTG	8618	False	NA	40	True	TTTAAA	-21	NA	117681927	117649725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117660498_117660580_117681735
ES.3821.10	chr10	-	1769	5	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	86	-602	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	384.706706466108	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGTAATAGGTGTTAT	8691	False	NA	-23	True	AATAAA	-16	NA	117681854	117650377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117653248_117653366_117654370_117654515_117660498_117660580_117681735
ES.3821.11	chr10	-	2124	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	-58	658	-58	-658	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTTTGTGTAATGTT	8547	False	NA	-6	True	NA	NA	NA	117681998	117650433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.12	chr10	-	1962	8	NNC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	83	-664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	344.176331171647	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAATGTGTTTTGTGT	8688	False	NA	-12	True	AATAAA	-40	NA	117681857	117650439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681750
ES.3821.13	chr10	-	1968	8	NNC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	75	-672	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	319.491432608457	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTGCCACTGAATGTG	8680	False	NA	14	True	AATAAA	-32	NA	117681865	117650447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658766_117660498_117660580_117681735
ES.3821.14	chr10	-	1987	7	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	7	-673	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	371.017257759738	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTGCCACTGAATGT	8612	False	NA	13	True	AATAAA	-31	NA	117681933	117650448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117658705_117658775_117660498_117660580_117681735
ES.3821.17	chr10	-	1872	7	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	20	-688	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	374.368097228146	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCTTGCATTATAGTTA	8625	False	NA	-2	True	AATAAA	-16	NA	117681920	117650463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117653248_117653366_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.18	chr10	-	1869	7	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	48	-690	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	377.074152742755	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGGCTTGCATTATAGT	8653	False	NA	-4	True	AATAAA	-14	NA	117681892	117650465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.19	chr10	-	1177	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	12	1535	12	254	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCTATATAGACTACTC	8617	False	NA	-21	True	AATAAA	-14	NA	117681928	117651310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.2	chr10	-	2717	8	NNC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	1	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	344.176331171647	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACTCGTTATGTATTTAA	8606	False	NA	-1	True	ATTAAA	-21	NA	117681939	117649766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681750
ES.3821.3	chr10	-	2771	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	-46	-1	-46	1	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTCGTACTCGTTAT	8559	False	NA	-9	True	ATTAAA	-13	NA	117681986	117649774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.5	chr10	-	2560	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	52	112	52	-112	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAGTACTTGCCAGCTG	8657	False	NA	NA	False	TATAAA	-17	NA	117681888	117649887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.6	chr10	-	2250	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	-33	507	-33	-507	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGGGTTCAGTTTTGG	8572	False	NA	72	True	AATGAA	-3	NA	117681973	117650282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ES.3821.8	chr10	-	2057	8	NNC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	78	-600	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_7	328.295349852376	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAATAGGTGTTATTT	8683	False	NA	-21	True	AATAAA	-18	NA	117681862	117650375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681724
ES.3821.9	chr10	-	3853	7	NIC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	-5	-600	intron_retention	FALSE	canonical	3	789	junction_2	62.3431364840322	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAATAGGTGTTATTT	8600	False	NA	-21	True	AATAAA	-18	NA	117681945	117650375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117660580_117681735
ES.3822.1	chr10	+	222	1	Intergenic	novelGene_2905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTCACTCGCAAATGA	NA	False	NA	NA	False	NA	NA	NA	117686759	117686981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117686800_117687000
ES.3823.1	chr10	+	130	1	Intergenic	novelGene_2906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGTAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	117693596	117693726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_117693600_117693700
ES.3824.1	chr10	-	892	1	Intergenic	novelGene_2907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	8918	False	NA	NA	False	NA	NA	NA	117770323	117769431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117769400_117770300
ES.3825.1	chr10	-	1525	1	Intergenic	novelGene_2908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCTTACTCAAGATCAC	5065	False	NA	NA	False	NA	NA	NA	117830266	117828741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117828700_117830300
ES.3826.1	chr10	-	172	1	Intergenic	novelGene_2909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	117913943	117913771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_117913800_117913900
ES.3827.1	chr10	+	3014	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	-69	129	-48	-129	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAACTGCTTAATCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	117977667	118004773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.10	chr10	+	2237	2	FSM	ENSMUSG00000020212.15	ENSMUST00000219827.2	318	2	-2	-1917	-2	538	multi-exon	FALSE	canonical	1	4	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGTGTTCTTAGACT	NA	False	NA	NA	False	AATAAA	-23	NA	117977713	117984582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117982499
ES.3827.11	chr10	+	2860	14	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-1	-203	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	28.3183508362129	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAAATTAAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	117977714	118004699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.12	chr10	+	7853	13	NNC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	38.6368419459401	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977716	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987910_117989050_117989284_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.13	chr10	+	2388	10	NNC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	1	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.1915446915617	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCGGAGACATCTTCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	117977716	117995349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994768_117994839
ES.3827.14	chr10	+	2959	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977716	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.15	chr10	+	4006	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	32	junction_3	22.067514735728	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977716	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.16	chr10	+	2991	14	FSM	ENSMUSG00000020212.15	ENSMUST00000169817.3	2022	14	-133	-836	1	2	multi-exon	FALSE	canonical	2	2	junction_6	36.5594271833727	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977716	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.17	chr10	+	2927	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.3919868142473	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977717	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.18	chr10	+	2977	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	27.735231305247	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977718	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.19	chr10	+	4112	12	NIC	ENSMUSG00000020212.15	novel	2022	14	NA	NA	3	2	intron_retention	FALSE	canonical	2	2	junction_4	38.870626697221	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977718	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.2	chr10	+	2248	9	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	45.2062979572537	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977695	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986726_117986862_117987906_117988002_117988079_117988180_118000105_118000353_118002529_118002590_118003955
ES.3827.20	chr10	+	3123	15	FSM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	-45	-617	3	1	multi-exon	FALSE	canonical	2	2	junction_7	33.0859270903593	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGATGCTTCTGTTTTCC	NA	False	NA	12	True	ATTAAA	-15	NA	117977718	118004903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.21	chr10	+	2624	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-3	-203	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	32.0750669111597	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAAATTAAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	117977733	118004699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.22	chr10	+	2427	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	1	-134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.8575128632672	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATTAGAACTGCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	117977737	118004768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.23	chr10	+	2978	13	NIC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	37.435407333462	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGATGCTTCTGTTT	NA	False	NA	9	True	ATTAAA	-12	NA	117977737	118004900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ES.3827.24	chr10	+	4198	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	66	junction_4	16.1583077421774	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977737	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.25	chr10	+	3073	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	1	0	1	0	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977737	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.26	chr10	+	2911	15	FSM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	-26	-424	1	-192	multi-exon	FALSE	canonical	2	2	junction_7	33.0859270903593	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGTGCTTGGCTTCTT	NA	False	NA	NA	False	ATTAAA	-27	NA	117977737	118004710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.27	chr10	+	2812	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-13	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	32.0750669111597	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977750	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.3	chr10	+	3215	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	-39	-102	-18	102	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAATCTCTGTAGTGG	NA	False	NA	NA	False	ATTAAA	-34	NA	117977697	118005004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.30	chr10	+	2155	2	ISM	ENSMUSG00000020212.15	ENSMUST00000218011.2	690	4	958	-527	937	527	intron_retention	FALSE	canonical	3	115	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCTGTCCTCTGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	117978786	117984571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_117978870_117982499
ES.3827.31	chr10	+	4925	10	ISM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	6347	1	1514	-1	3prime_fragment	FALSE	canonical	3	83	junction_9	7.94580407945828	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGATGCTTCTGTTTT	1178	False	NA	10	True	ATTAAA	-13	NA	117984083	118004901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.32	chr10	+	5318	8	NIC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	1915	-192	intron_retention	FALSE	canonical	2	6	junction_7	33.6827940088838	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGTGCTTGGCTTCTT	1579	False	NA	NA	False	ATTAAA	-27	NA	117984484	118004710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ES.3827.33	chr10	+	1950	7	ISM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	15232	134	52	-134	3prime_fragment	FALSE	canonical	3	83	junction_6	8.15304987242334	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATTAGAACTGCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	117992968	118004768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.4	chr10	+	3079	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-17	102	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAATCTCTGTAGTGG	NA	False	NA	NA	False	ATTAAA	-34	NA	117977698	118005004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.5	chr10	+	3054	13	FSM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	-130	-2	-17	2	multi-exon	FALSE	canonical	2	6	junction_12	29.3295452099452	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977698	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ES.3827.6	chr10	+	2965	14	NIC	ENSMUSG00000020212.15	novel	2022	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	40.6965971274194	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977707	118004902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986726_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.7	chr10	+	2473	11	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	29.641187560555	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGATGCTTCTGTTT	NA	False	NA	9	True	ATTAAA	-12	NA	117977708	118004900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3827.8	chr10	+	2704	12	NIC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	-7	-203	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	33.7594798440207	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGAAAATTAAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	117977708	118004699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ES.3827.9	chr10	+	3068	14	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	28.3183508362129	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	False	NA	13	True	ATTAAA	-16	NA	117977711	118004904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ES.3828.1	chr10	+	2860	1	FSM	ENSMUSG00000112614.2	ENSMUST00000218405.2	2410	1	-114	-336	-114	336	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGGGAGTCTCGTTC	NA	False	NA	NA	False	AATAAA	-36	NA	118089049	118091909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_118089000_118091900
ES.3829.1	chr10	-	4914	3	Genic_Genomic	ENSMUSG00000112814.2_ENSMUSG00000112135.2	novel	2410	1	NA	NA	-5553	336	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGGGAGTCTCGTTC	NA	False	NA	NA	False	AATAAA	-36	NA	118168427	118079368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_118082072_118160785_118162919_118168349
ES.383.1	chr1	+	2184	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGAACTTCTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	43858545	43860729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_43858500_43860700
ES.383.2	chr1	+	4501	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCACTGTGCAGACA	NA	False	NA	NA	False	NA	NA	NA	43859493	43863994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_43859500_43864000
ES.3830.1	chr10	+	182	1	Intergenic	novelGene_2910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACATCTTTATTTCTTT	4670	False	NA	NA	False	NA	NA	NA	118209494	118209676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_118209500_118209700
ES.3831.1	chr10	-	174	1	Intergenic	novelGene_2911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTAGGATATAG	NA	False	NA	NA	False	NA	NA	NA	118210078	118209904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_118209900_118210100
ES.3832.1	chr10	+	175	1	Intergenic	novelGene_2912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	118572328	118572503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_118572300_118572500
ES.3833.1	chr10	-	6048	4	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	303	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6707311029399	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCACCCCTTTTTCTAA	NA	False	NA	-6	True	AATAAA	-20	NA	118704751	118691506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118703269_118703491_118704054_118704204_118704625
ES.3833.10	chr10	-	3434	3	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	-17	-2309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118705071	118693816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118704054_118704204_118705028
ES.3833.11	chr10	-	2973	4	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	-59	-2337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.5848929700813	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-43	NA	118705113	118693844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118694627_118695504_118697059_118704054_118704204_118704625
ES.3833.12	chr10	-	2411	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-20	3738	-20	1397	multi-exon	FALSE	canonical	3	29	junction_2	3.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAACTGTTTTTGTTTTT	NA	False	NA	-1	True	TATAAA	-36	NA	118705074	118695245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_118697059_118704054_118704204_118704625
ES.3833.13	chr10	-	2251	2	NIC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	-16	1390	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTCTGAAACTGTTTT	NA	False	NA	-8	True	TATAAA	-29	NA	118705070	118695252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_118697059_118704625
ES.3833.2	chr10	-	6157	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-28	0	-28	0	multi-exon	FALSE	canonical	3	29	junction_2	3.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCACCCCTTTTTCTA	NA	False	NA	-7	True	AATAAA	-19	NA	118705082	118691507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_118697059_118704054_118704204_118704625
ES.3833.3	chr10	-	5863	3	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	-57	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTACATCTCACCCCTTT	NA	False	NA	-12	True	AATAAA	-14	NA	118705111	118691512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118704054_118704204_118704943
ES.3833.4	chr10	-	4366	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-59	1822	-59	-1822	multi-exon	FALSE	canonical	3	29	junction_2	3.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCCTCCCCGCCAGG	NA	False	NA	NA	False	AATAAA	-18	NA	118705113	118693329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_118697059_118704054_118704204_118704625
ES.3833.5	chr10	-	3924	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	-64	2269	-64	-2269	multi-exon	FALSE	canonical	3	29	junction_2	3.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGCCAGTTGATGGT	NA	False	NA	NA	False	AATAAA	-18	NA	118705118	118693776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_118697059_118704054_118704204_118704625
ES.3833.6	chr10	-	3739	3	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	-38	-2309	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	18	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118705092	118693816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118704054_118704223_118704763
ES.3833.7	chr10	-	3368	2	NNC	ENSMUSG00000028630.10	novel	469	2	NA	NA	-15	-2309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118705069	118693816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118704943
ES.3833.8	chr10	-	6465	1	NIC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	3923	-2309	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118700281	118693816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_118693800_118700300
ES.3833.9	chr10	-	3987	4	NNC	ENSMUSG00000028630.10	novel	6129	3	NA	NA	2	-2309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6707311029399	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118705052	118693816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118697059_118703269_118703439_118704054_118704204_118704625
ES.3834.1	chr10	+	214	1	Intergenic	novelGene_2913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAACAAAACAGAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	118959143	118959357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_118959100_118959400
ES.3835.1	chr10	-	992	3	NNC	ENSMUSG00000112161.2	novel	988	6	NA	NA	1228	11	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAACCATAGACTGTCT	NA	False	NA	NA	False	NA	NA	NA	119001062	118971057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_118971798_118976586_118976736_119000959
ES.3835.2	chr10	-	180	2	Intergenic	novelGene_2914	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCTCACCCCT	NA	False	NA	NA	False	NA	NA	NA	119016828	118972739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_118972747_119016655
ES.3835.3	chr10	-	186	1	Intergenic	novelGene_2915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAATTTCAAGAT	NA	False	NA	NA	False	NA	NA	NA	119016829	119016643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119016600_119016800
ES.3836.1	chr10	-	8211	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-3	-442	-3	442	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACTGCTTCATTCCAAT	223	False	NA	NA	False	NA	NA	NA	119075963	119034717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.10	chr10	-	6839	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	20	907	20	-907	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGATGTTTCATCTTAA	246	False	NA	NA	False	AGTAAA	-18	NA	119075940	119036066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.11	chr10	-	6469	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-58	1355	-58	-1355	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTACATTCCTTGGGT	168	False	NA	NA	False	ATTAAA	-21	NA	119076018	119036514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.14	chr10	-	4853	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	17	2896	17	-2896	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCACAGTGTCCGTGCGT	243	False	NA	NA	False	TATAAA	-29	NA	119075943	119038055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.15	chr10	-	4818	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-93	3041	-93	-3041	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATCTGGTGAAAGAGGA	133	False	NA	NA	False	ATTAAA	-43	NA	119076053	119038200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.17	chr10	-	4592	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-93	3267	-93	-3267	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAGTATTCATTTAAGA	133	False	NA	0	True	CATAAA	-18	NA	119076053	119038426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.19	chr10	-	4352	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-21	-3270	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	197.703142474718	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATAGAGTATTCATTTA	205	False	NA	-3	True	CATAAA	-15	NA	119075981	119038429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.2	chr10	-	7847	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-53	-28	-53	28	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTGCAGTAAGTAAAAAAT	173	False	NA	1	True	AATAAA	-25	NA	119076013	119035131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.22	chr10	-	4593	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	29	-3270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.822054067635	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATAGAGTATTCATTTA	255	False	NA	-3	True	CATAAA	-15	NA	119075931	119038429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119046101_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.23	chr10	-	5427	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-26	-3330	intron_retention	FALSE	canonical	3	515	junction_8	88.988331127868	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTTTCTTTCCTTGT	200	False	NA	-4	True	TTTAAA	-20	NA	119075986	119038489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.24	chr10	-	4738	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-152	-3330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	246.464277330407	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTTTCTTTCCTTGT	74	False	NA	-4	True	TTTAAA	-20	NA	119076112	119038489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119073536_119073687_119075545
ES.3836.25	chr10	-	4494	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-8	-3331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	252.500687006542	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATGTTTCTTTCCTTG	218	False	NA	-5	True	TTTAAA	-19	NA	119075968	119038490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044093_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051051_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.26	chr10	-	4214	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	0	-3332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	192.919833667309	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCATGTTTCTTTCCTT	226	False	NA	-6	True	TTTAAA	-18	NA	119075960	119038491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545_119075652_119075871
ES.3836.28	chr10	-	4306	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	8	-3333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	199.685684136294	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCATGTTTCTTTCCT	234	False	NA	-7	True	TTTAAA	-17	NA	119075952	119038492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119047935_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.29	chr10	-	4589	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	-203	3380	-203	-3380	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTTTTGTAAATTC	3	True	NA	-19	True	ATTAAA	-25	NA	119076163	119038539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.33	chr10	-	4481	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-28	-3382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	251.000787958037	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTGGTTTTGTAAAT	198	False	NA	-21	True	ATTAAA	-23	NA	119075988	119038541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119058484_119058554_119063307_119063452_119075545
ES.3836.34	chr10	-	5640	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-23	-3382	intron_retention	FALSE	canonical	3	515	junction_9	94.0553154631034	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTGGTTTTGTAAAT	203	False	NA	-21	True	ATTAAA	-23	NA	119075983	119038541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.35	chr10	-	4492	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-8	-3382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	250.377812293519	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTGGTTTTGTAAAT	218	False	NA	-21	True	ATTAAA	-23	NA	119075968	119038541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053400_119053501_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.39	chr10	-	4332	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	25	-3390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	259.803418619791	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	251	False	NA	-29	True	ATTAAA	-15	NA	119075935	119038549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053958_119055494_119055643_119063307_119063452_119075545
ES.3836.41	chr10	-	4505	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-53	-3390	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	251.000787958037	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	173	False	NA	-29	True	ATTAAA	-15	NA	119076013	119038549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119062402_119062479_119063307_119063452_119075545
ES.3836.42	chr10	-	4092	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-239	-3390	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_14	196.82023290717	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	739	False	NA	-29	True	ATTAAA	-15	NA	119075447	119038549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075316
ES.3836.44	chr10	-	5451	13	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-8	-3391	intron_retention	FALSE	canonical	0	0	junction_2	205.352322579729	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	218	False	NA	-30	True	ATTAAA	-14	NA	119075968	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.45	chr10	-	5160	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	10	-3391	intron_retention	FALSE	canonical	3	580	junction_7	79.9932689476001	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	236	False	NA	-30	True	ATTAAA	-14	NA	119075950	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.46	chr10	-	7079	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-195	-3391	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	199.352433787859	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	783	False	NA	-30	True	ATTAAA	-14	NA	119075403	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119072284
ES.3836.47	chr10	-	4377	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	0	-3391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.884597429722	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	226	False	NA	-30	True	ATTAAA	-14	NA	119075960	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044093_119044171_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.5	chr10	-	7604	15	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-96	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	199.58303473768	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTTTCCTTCAGAAT	882	False	NA	-22	True	AATAAA	-29	NA	119075304	119035154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075056
ES.3836.50	chr10	-	4399	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-23	-3391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	199.604315216533	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	203	False	NA	-30	True	ATTAAA	-14	NA	119075983	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052608_119053839_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.51	chr10	-	4352	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	4	-3391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.822054067635	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCATGGATTTCTTGGT	230	False	NA	-30	True	ATTAAA	-14	NA	119075956	119038550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045956_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.52	chr10	-	4330	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-14	-3392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	199.604315216533	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCATGGATTTCTTGG	212	False	NA	-31	True	ATTAAA	-13	NA	119075974	119038551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052555_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.54	chr10	-	4371	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-3	-3392	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	198.822054067635	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCATGGATTTCTTGG	223	False	NA	-31	True	ATTAAA	-13	NA	119075963	119038551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045969_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.55	chr10	-	4210	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-1	-3392	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	197.703142474718	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCATGGATTTCTTGG	225	False	NA	-31	True	ATTAAA	-13	NA	119075961	119038551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.57	chr10	-	3693	13	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-7021	-3393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	215.494827857499	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACCATGGATTTCTTG	NA	False	NA	-32	True	ATTAAA	-12	NA	119055535	119038552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048351_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494
ES.3836.58	chr10	-	4396	15	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-30	-3393	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	258.300410454216	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACCATGGATTTCTTG	196	False	NA	-32	True	ATTAAA	-12	NA	119075990	119038552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052055_119052154_119052355_119052614_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.59	chr10	-	5666	13	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-9	-3393	intron_retention	FALSE	canonical	3	515	junction_7	87.3633456700616	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACCATGGATTTCTTG	217	False	NA	-32	True	ATTAAA	-12	NA	119075969	119038552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.60	chr10	-	4191	14	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-54	-3394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197.703142474718	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGACCATGGATTTCTT	172	False	NA	-33	True	ATTAAA	-11	NA	119076014	119038553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119044247_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.62	chr10	-	4480	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-28	-3395	intron_retention	FALSE	canonical	3	515	junction_8	90.3280674171301	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGACCATGGATTTCT	198	False	NA	-34	True	ATTAAA	-10	NA	119075988	119038554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119039111_119042620_119042729_119043931_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ES.3836.63	chr10	-	4208	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-54	-3396	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	192.919833667309	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATGACCATGGATTTC	172	False	NA	-35	True	ATTAAA	-9	NA	119076014	119038555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545_119075661_119075876
ES.3836.8	chr10	-	7964	16	NNC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	-53	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	246.464277330407	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAAAATCCATGTTTT	173	False	NA	-32	True	AATAAA	-19	NA	119076013	119035164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119073536_119073687_119075545
ES.3837.1	chr10	-	173	1	Intergenic	novelGene_2916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119084746	119084573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119084600_119084700
ES.3838.1	chr10	+	208	1	Intergenic	novelGene_2917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119089099	119089307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_119089100_119089300
ES.3839.1	chr10	-	158	1	Intergenic	novelGene_2918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTAAG	NA	False	NA	NA	False	NA	NA	NA	119100328	119100170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119100200_119100300
ES.384.1	chr1	-	4684	10	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	0	427	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	66.8161287544287	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACTCTTTTTTAAATCA	NA	False	NA	NA	False	AATATA	-18	NA	43866960	43785698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43866774
ES.384.10	chr1	-	1935	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-2	-21	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	54.4177355356542	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGACATGGGTTTTGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	43866962	43788692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.11	chr1	-	1982	14	NNC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	14	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	56.3974694132017	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGACATGGGTTTTGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	43866887	43788692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43866759
ES.384.12	chr1	-	1744	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-1	-21	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	71.7104632012957	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGACATGGGTTTTGAGC	NA	False	NA	-23	True	AATAAA	-13	NA	43866923	43788692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866865
ES.384.13	chr1	-	1771	13	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	0	-23	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	58.3201770878275	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGACATGGGTTTTGA	NA	False	NA	-25	True	AATAAA	-11	NA	43866922	43788694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.14	chr1	-	2092	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-27	-24	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCAGACATGGGTTTTG	NA	False	NA	-26	True	AATAAA	-10	NA	43866987	43788695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
ES.384.15	chr1	-	1953	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	10	-126	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTTGTGCTGCAT	NA	False	NA	-128	True	NA	NA	NA	43866950	43788797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
ES.384.16	chr1	-	1813	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	6	-126	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	53.2094916344819	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTTGTGCTGCAT	NA	False	NA	-128	True	NA	NA	NA	43866916	43788797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866865
ES.384.17	chr1	-	5258	13	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-3	-126	intron_retention	FALSE	canonical	3	14	junction_8	54.4764857530293	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTTGTGCTGCAT	NA	False	NA	-128	True	NA	NA	NA	43866963	43788797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.18	chr1	-	1916	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	32	2672	-6	-126	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTTGTGCTGCAT	NA	False	NA	-128	True	NA	NA	NA	43866928	43788797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.19	chr1	-	1913	14	NNC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-6	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	56.3974694132017	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTACTGTGTTGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	43866928	43788799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844858_43866770
ES.384.2	chr1	-	3758	16	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	13	-883	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	70.3644480938745	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAATCTATAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	43866888	43787008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43841691_43841785_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.20	chr1	-	1786	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	-4	2838	-4	-292	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGGTGGGTGGGGCACC	NA	False	NA	NA	False	AATAAA	-15	NA	43866964	43788963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.21	chr1	-	2691	16	NNC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	10	-367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	70.1498079509528	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTATTTATAAAAGTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	43866950	43789038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43864802_43864919_43865896
ES.384.22	chr1	-	1515	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	0	-367	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	70.9925406532431	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTATTTATAAAAGTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	43866934	43789038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
ES.384.23	chr1	-	1408	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	4	-367	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	83.2097940298208	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTATTTATAAAAGTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	43866918	43789038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866865
ES.384.24	chr1	-	1585	15	FSM	ENSMUSG00000057363.13	ENSMUST00000076997.13	1921	15	-33	369	0	-369	multi-exon	FALSE	canonical	2	3	junction_10	53.8541113205153	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTTATTTATAAAAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	43866934	43789040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829711_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.26	chr1	-	2518	9	ISM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	21418	12531	20634	5510	internal_fragment	FALSE	canonical	3	170	junction_8	20.9985118520337	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCAAACTCTTAAATGA	NA	False	NA	NA	False	NA	NA	NA	43845542	43798656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785
ES.384.27	chr1	-	6189	10	NIC	ENSMUSG00000057363.13	novel	1921	15	NA	NA	7	5510	intron_retention	FALSE	canonical	2	3	junction_5	63.2890683518055	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGCAAACTCTTAAATGA	NA	False	NA	NA	False	NA	NA	NA	43866894	43798656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829711_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.28	chr1	-	5809	8	NNC	ENSMUSG00000057363.13	novel	854	10	NA	NA	21369	5477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.297964938298	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43844807	43798689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_43801469_43801553_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785
ES.384.3	chr1	-	3039	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	72	1509	13	1037	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	43866888	43787634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.4	chr1	-	2651	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	9	1960	9	586	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCACAAAATGCAGTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	43866951	43788085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.5	chr1	-	2098	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	-24	2546	-24	0	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	False	NA	-2	True	AATAAA	-34	NA	43866984	43788671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.6	chr1	-	1865	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	53.1063463596267	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGATTGACATCTGCT	NA	False	NA	-3	True	AATAAA	-33	NA	43866933	43788672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.7	chr1	-	1945	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-6	-18	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	53.2094916344819	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGGGTTTTGAGCTAC	NA	False	NA	-20	True	AATAAA	-16	NA	43866940	43788689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866865
ES.384.8	chr1	-	1937	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-12	-18	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	55.7963329371274	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATGGGTTTTGAGCTAC	NA	False	NA	-20	True	AATAAA	-16	NA	43866946	43788689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.384.9	chr1	-	1921	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	-4	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	83.3855074766764	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATGGGTTTTGAGCTA	NA	False	NA	-21	True	AATAAA	-15	NA	43866914	43788690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43841691_43841785_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ES.3840.1	chr10	+	178	1	Intergenic	novelGene_2919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATCATTTTG	NA	False	NA	NA	False	NA	NA	NA	119143777	119143955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_119143800_119144000
ES.3841.1	chr10	-	172	1	Intergenic	novelGene_2920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAATGACTTGCCT	NA	False	NA	NA	False	NA	NA	NA	119197748	119197576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119197600_119197700
ES.3842.1	chr10	+	226	1	Intergenic	novelGene_2921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAACCTCTGTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	119251560	119251786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_119251600_119251800
ES.3843.1	chr10	-	1984	3	NNC	ENSMUSG00000085454.2	novel	485	3	NA	NA	-50	10974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGTAATAAATAGCATAG	7905	False	NA	NA	False	AATAAA	-20	NA	119290785	119254297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119255942_119265319_119265460_119290585
ES.3844.1	chr10	-	6509	1	Intergenic	novelGene_2922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAAACAG	NA	False	NA	NA	False	NA	NA	NA	119367522	119361013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119361000_119367500
ES.3845.1	chr10	+	2882	14	ISM	ENSMUSG00000034813.20	ENSMUST00000138410.8	3532	25	156413	24550	-16795	-24470	intron_retention	FALSE	canonical	1	1	junction_1	2.61990559475791	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTTTGGATTTATAGA	NA	False	NA	NA	False	AAGAAA	-15	NA	119811829	119886952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_119811923_119814342_119814513_119821378_119821535_119822236_119822390_119835656_119835844_119836430_119836577_119846110_119846192_119853977_119854048_119855865_119856012_119871255_119871401_119874195_119874336_119874503_119874699_119885255_119885413_119885909
ES.3845.2	chr10	+	3956	16	ISM	ENSMUSG00000034813.20	ENSMUST00000147454.8	4520	24	159187	-637	-14135	14	3prime_fragment	FALSE	canonical	1	1	junction_2	2.60426999794995	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGCATGTTTGGTGCA	NA	False	NA	NA	False	AATAAA	-37	NA	119814489	119913058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_119814513_119821378_119821535_119822236_119822390_119835656_119835844_119836430_119836577_119846110_119846192_119853977_119854048_119855865_119856012_119871255_119871401_119874195_119874336_119874503_119874699_119885255_119885413_119885909_119886022_119890737_119890972_119908535_119908683_119911194
ES.3845.3	chr10	+	158	1	Intergenic	novelGene_2923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	119887861	119888019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_119887900_119888000
ES.3846.1	chr10	+	2473	3	Antisense	novelGene_ENSMUSG00000020228.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	119932404	119939168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_119934242_119937302_119937441_119938670
ES.3847.1	chr10	-	4584	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	-28	-2	-28	2	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTGTGGTTTTCTTT	NA	False	NA	-1	True	NA	NA	NA	119948920	119919510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.10	chr10	-	3332	13	NNC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.7434940057619	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACTTCATATTAATCAA	NA	False	NA	NA	False	NA	NA	NA	119948785	119920612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934101_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.11	chr10	-	3146	12	ISM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	47	5795	47	-4633	5prime_fragment	FALSE	canonical	3	54	junction_6	7.03591729850522	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTTCCCTCGTATTC	NA	False	NA	NA	False	AGTAAA	-15	NA	119948845	119925307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.12	chr10	-	3068	10	NNC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	33	-8475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.7439794381002	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTTAGTTTG	NA	False	NA	NA	False	NA	NA	NA	119948859	119929149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119929895_119930131_119930192_119931005_119931097_119934101_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.13	chr10	-	2466	5	ISM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	9155	9664	9033	-8502	internal_fragment	FALSE	canonical	3	54	junction_3	7.62807315119618	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAGCACCAGAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	119939737	119929176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674
ES.3847.14	chr10	-	2652	6	ISM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	108	17095	-14	-15933	5prime_fragment	FALSE	canonical	3	57	junction_3	7.84856674813943	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCGTGTACAGATTCTG	NA	False	NA	NA	False	NA	NA	NA	119948784	119936607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.15	chr10	-	2923	2	NIC	ENSMUSG00000020228.12	novel	3095	12	NA	NA	142	-23575	intron_retention	FALSE	canonical	3	65	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATGAAGTCAGTTGAA	NA	False	NA	NA	False	NA	NA	NA	119948628	119944249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119947134_119948589
ES.3847.16	chr10	-	1366	3	ISM	ENSMUSG00000020228.12	ENSMUST00000154501.2	3095	12	-78	23575	44	-23575	5prime_fragment	FALSE	canonical	3	58	junction_1	3.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATGAAGTCAGTTGAA	NA	False	NA	NA	False	NA	NA	NA	119948848	119944249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_119944961_119946737_119947134_119948589
ES.3847.17	chr10	-	1804	4	NNC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	50	-23599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.408332191468	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119948842	119944273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119944471_119944790_119945832_119946820_119947134_119948589
ES.3847.3	chr10	-	5249	12	NIC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	34	-2	intron_retention	FALSE	canonical	3	54	junction_6	7.36644166541196	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCCCAGTCTGTGGTTTT	NA	False	NA	-5	True	NA	NA	NA	119948858	119919514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119920879_119925312_119925781_119927513_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.4	chr10	-	2864	10	NNC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	8249	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	22.3258693995205	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCCCAGTCTGTGGTTTT	NA	False	NA	-5	True	NA	NA	NA	119940521	119919514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119940461
ES.3847.5	chr10	-	7493	12	NIC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	47	-4	intron_retention	FALSE	canonical	3	54	junction_6	7.63095046233939	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGCCCAGTCTGTGGTT	NA	False	NA	-7	True	NA	NA	NA	119948845	119919516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.6	chr10	-	3632	10	NIC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	-24	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.6218910560456	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATCGCCCAGTCTGTG	NA	False	NA	-10	True	NA	NA	NA	119948794	119919519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119920879_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.7	chr10	-	4415	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	33	106	33	-106	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGATGGTAATGCTTT	NA	False	NA	-109	True	NA	NA	NA	119948859	119919618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.8	chr10	-	3590	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	33	931	33	169	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTTTCAAAAGGAGGT	NA	False	NA	NA	False	AATAAA	-21	NA	119948859	119920443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ES.3847.9	chr10	-	5956	5	NIC	ENSMUSG00000020228.12	novel	3095	12	NA	NA	-6000	166	intron_retention	FALSE	canonical	3	60	junction_3	5.80409338312195	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTAAGTTTCAAAAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	119934114	119920446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119930192_119931005
ES.3848.1	chr10	-	178	1	Intergenic	novelGene_2924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	119962283	119962105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_119962100_119962300
ES.3849.1	chr10	+	1348	2	Antisense	novelGene_ENSMUSG00000020227.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACCTCAAACTTAAG	3639	False	NA	NA	False	NA	NA	NA	119996606	120000663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_119996686_119999394
ES.3849.2	chr10	+	193	1	Intergenic	novelGene_2925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAACAAAAAAACC	4567	False	NA	NA	False	NA	NA	NA	119997534	119997727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_119997500_119997700
ES.385.1	chr1	-	183	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTGCAG	NA	False	NA	NA	False	NA	NA	NA	43881133	43880950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43881000_43881100
ES.3850.1	chr10	+	1348	1	Genic_Genomic	ENSMUSG00000112894.2	novel	NA	NA	NA	NA	753	404	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTTCTGCAAAAACTACC	NA	False	NA	NA	False	NA	NA	NA	120005306	120006654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_120005300_120006700
ES.3851.1	chr10	+	1825	5	Antisense	novelGene_ENSMUSG00000020227.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTGCTGAAAATGGCC	NA	False	NA	NA	False	NA	NA	NA	120010458	120031172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_120010524_120018979_120019027_120027692_120027995_120028661_120029322_120030421
ES.3851.2	chr10	+	153	1	Intergenic	novelGene_2926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	120023026	120023179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120023000_120023200
ES.3852.1	chr10	+	963	7	NIC	ENSMUSG00000020225.11	novel	381	4	NA	NA	1	-7	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	211.228483453871	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	False	NA	24	True	ATTAAA	-36	NA	120037495	120060815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_120037755_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ES.3852.10	chr10	+	7414	1	NIC	ENSMUSG00000020225.11	novel	360	3	NA	NA	12	-1344	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCTGTATACATCAC	NA	False	NA	NA	False	NA	NA	NA	120044709	120052123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_120044700_120052100
ES.3852.11	chr10	+	1309	1	NIC	ENSMUSG00000020225.11	novel	904	7	NA	NA	1781	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	False	NA	24	True	ATTAAA	-36	NA	120059506	120060815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_120059500_120060800
ES.3852.2	chr10	+	807	4	NNC	ENSMUSG00000020225.11	novel	593	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.942809041582063	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCCCTAGATAAGTCTCA	NA	False	NA	NA	False	AATAAA	-32	NA	120037497	120039113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120037755_120038006_120038101_120038417_120038613_120038852
ES.3852.3	chr10	+	179	1	Intergenic	novelGene_2927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120039856	120040035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120039900_120040000
ES.3852.4	chr10	+	904	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	-1	1	-1	-1	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTCTTCTATAAT	NA	False	NA	30	True	ATTAAA	-42	NA	120044653	120060821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ES.3852.5	chr10	+	827	7	NNC	ENSMUSG00000020225.11	novel	904	7	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	218.045611945962	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	False	NA	24	True	ATTAAA	-36	NA	120044678	120060815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060570
ES.3852.7	chr10	+	2092	6	NIC	ENSMUSG00000020225.11	novel	904	7	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	514	junction_5	45.7619929635937	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	False	NA	24	True	ATTAAA	-36	NA	120044680	120060815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120058029_120059741_120059788_120060524
ES.3852.8	chr10	+	855	7	NNC	ENSMUSG00000020225.11	novel	904	7	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	220.085147663858	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCATTCTGTGTTCTT	NA	False	NA	23	True	ATTAAA	-35	NA	120044689	120060814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058023_120059741_120059788_120060524
ES.3852.9	chr10	+	470	3	FSM	ENSMUSG00000020225.11	ENSMUST00000134797.8	486	3	15	1	2	-1	multi-exon	FALSE	canonical	3	595	junction_1	20.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGCTTGTCTGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	120044699	120053621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120044848_120051445_120051555_120053408
ES.3853.1	chr10	-	4751	11	ISM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	18950	-1986	-12331	1986	3prime_fragment	FALSE	canonical	2	13	junction_2	3.78021163428716	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACTCCCAGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	120018614	119975566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430
ES.3853.4	chr10	-	3179	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	-86	4	-86	-4	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTTTGTTAACTC	NA	False	NA	NA	False	ATTAAA	-13	NA	120037650	119977556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
ES.3853.5	chr10	-	903	6	ISM	ENSMUSG00000020227.11	ENSMUST00000143100.2	1171	8	21	5238	21	-5238	5prime_fragment	FALSE	canonical	2	13	junction_4	2.65329983228432	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTTTGGTGTTCTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	120037471	120006118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
ES.3854.1	chr10	+	767	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-24	921	-24	97	multi-exon	FALSE	canonical	3	990	junction_2	137	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTATGCTGAAGTTG	NA	False	NA	6	True	AATAAA	-18	NA	120062950	120067566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120063029_120063878_120064109_120067107
ES.3854.10	chr10	+	1368	4	NNC	ENSMUSG00000020224.16	novel	767	4	NA	NA	1	95	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	590.254935505743	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120063007	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120063029_120063878_120064109_120066314_120066975_120067107
ES.3854.2	chr10	+	1173	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	-20	511	-20	0	multi-exon	FALSE	canonical	3	990	junction_2	137	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120062954	120067976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120063029_120063878_120064109_120067107
ES.3854.3	chr10	+	1548	3	ISM	ENSMUSG00000020224.16	ENSMUST00000220107.2	767	4	-46	-95	-14	95	intron_retention	FALSE	canonical	3	22	junction_2	621	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062960	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_120063029_120063878_120064109_120066314
ES.3854.4	chr10	+	2378	3	NIC	ENSMUSG00000020224.16	novel	1463	3	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	22	junction_2	6.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTTGGAGTTTGACAT	NA	False	NA	6	True	AATAAA	-15	NA	120062966	120067974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_120063455_120063878_120064109_120066314
ES.3854.5	chr10	+	902	4	FSM	ENSMUSG00000020224.16	ENSMUST00000220107.2	767	4	-40	-95	-8	95	multi-exon	FALSE	canonical	3	16	junction_3	586.90373997786	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062966	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120063029_120063878_120064109_120066314_120066468_120067107
ES.3854.6	chr10	+	3743	2	ISM	ENSMUSG00000020224.16	ENSMUST00000220107.2	767	4	-35	-95	-3	95	intron_retention	FALSE	canonical	3	1264	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062971	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_120063029_120063878
ES.3854.7	chr10	+	715	3	NNC	ENSMUSG00000020224.16	novel	1664	3	NA	NA	-15	95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	495	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062991	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120063020_120063878_120064109_120067107
ES.3854.8	chr10	+	608	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	19	1037	-13	-19	multi-exon	FALSE	canonical	3	990	junction_2	137	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120062993	120067450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120063029_120063878_120064109_120067107
ES.3854.9	chr10	+	1148	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	-97	412	-13	95	multi-exon	FALSE	canonical	3	35	junction_1	477.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062993	120067564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120063455_120063878_120064109_120067107
ES.3855.1	chr10	-	228	1	Intergenic	novelGene_2928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATCGCCATTTTCCTAT	NA	False	NA	NA	False	NA	NA	NA	120102314	120102086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120102100_120102300
ES.3856.1	chr10	-	178	1	Intergenic	novelGene_2929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAAATAAATGCTATCA	7803	False	NA	NA	False	NA	NA	NA	120105190	120105012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120105000_120105200
ES.3857.1	chr10	-	179	1	Intergenic	novelGene_2930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	120113673	120113494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120113500_120113700
ES.3858.1	chr10	+	4170	6	NNC	ENSMUSG00000034764.16	novel	2629	4	NA	NA	-36069	-6119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTATTTTGCTTGAGTT	1777	False	NA	NA	False	ATTAAA	-20	NA	120163992	120210510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120164261_120184164_120184283_120184633_120184813_120200115_120200222_120205779_120205930_120207161
ES.3859.1	chr10	+	1985	1	Intergenic	novelGene_2931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAAGAAAGGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	120242266	120244251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120242300_120244300
ES.386.1	chr1	-	159	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAATAAATCATTGAAA	NA	False	NA	NA	False	NA	NA	NA	43885903	43885744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43885700_43885900
ES.3860.1	chr10	+	176	1	Intergenic	novelGene_2932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGCCACAGAT	NA	False	NA	NA	False	NA	NA	NA	120281768	120281944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120281800_120281900
ES.3861.1	chr10	+	176	1	Intergenic	novelGene_2933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	120286280	120286456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120286300_120286500
ES.3862.1	chr10	+	150	1	Intergenic	novelGene_2934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATACTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120299709	120299859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120299700_120299900
ES.3863.1	chr10	+	174	1	Intergenic	novelGene_2935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120305336	120305510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120305300_120305500
ES.3864.1	chr10	-	4239	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	-520	-9	-520	9	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTCAGTTTCCTTTT	NA	False	NA	-4	True	AATAAA	-29	NA	120312894	120197170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ES.3864.10	chr10	-	1216	4	NNC	ENSMUSG00000056758.15	novel	3389	2	NA	NA	-53	8571	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.28653526310404	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTTAAAGTGAATGCGT	NA	False	NA	NA	False	ATTAAA	-21	NA	120312427	120297623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120298132_120298568_120298620_120309156_120309244_120311857
ES.3864.2	chr10	-	3408	6	NNC	ENSMUSG00000056758.15	novel	3810	6	NA	NA	489	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.51361950083609	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTCAGTTTCCTT	NA	False	NA	-6	True	AATAAA	-27	NA	120311708	120197172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120200202_120206530_120206631_120210572_120210606_120298568_120298620_120309156_120309244_120311600
ES.3864.3	chr10	-	3275	5	NNC	ENSMUSG00000056758.15	novel	3710	5	NA	NA	-961	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.3619026473818	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTTCAGTTTCCT	NA	False	NA	-7	True	AATAAA	-26	NA	120313335	120197173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120313259
ES.3864.4	chr10	-	3398	5	NNC	ENSMUSG00000056758.15	novel	3710	5	NA	NA	395	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.3619026473818	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTGTGTTCAGTTT	NA	False	NA	-10	True	AATAAA	-23	NA	120311802	120197176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311600
ES.3864.5	chr10	-	4332	6	FSM	ENSMUSG00000056758.15	ENSMUST00000159699.2	3810	6	-520	-2	-520	2	multi-exon	FALSE	canonical	0	0	junction_1	8.20731381147328	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGTGTGTTCAGTT	NA	False	NA	-11	True	AATAAA	-22	NA	120312894	120197177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120200202_120206530_120206631_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ES.3864.6	chr10	-	3168	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	186	356	9	-356	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGTGTCCAATGGAACA	NA	False	NA	NA	False	NA	NA	NA	120312188	120197535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ES.3864.7	chr10	-	1540	1	ISM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	113055	600	112878	-600	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATCAGATTCTCATTC	2247	False	NA	NA	False	AATAAA	-11	NA	120199319	120197779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_120197800_120199300
ES.3864.8	chr10	-	621	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	377	2712	200	-2712	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAATGACTGTTTTC	NA	False	NA	-26	True	NA	NA	NA	120311997	120199891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ES.3864.9	chr10	-	1404	4	NNC	ENSMUSG00000056758.15	novel	3389	2	NA	NA	-334	8572	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	7.40870359029762	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAAAGTGAATGCGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	120312708	120297622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120298038_120298568_120298620_120309156_120309244_120311857
ES.3865.1	chr10	-	180	1	Intergenic	novelGene_2936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120323151	120322971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120323000_120323200
ES.3866.1	chr10	-	173	1	Intergenic	novelGene_2937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACTACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120334909	120334736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120334700_120334900
ES.3867.1	chr10	-	204	1	Intergenic	novelGene_2938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGAGGCCACAGGATAC	NA	False	NA	NA	False	NA	NA	NA	120338623	120338419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120338400_120338600
ES.3868.1	chr10	-	191	1	Intergenic	novelGene_2939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGACTAAAATTGTCC	NA	False	NA	NA	False	NA	NA	NA	120345697	120345506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120345500_120345700
ES.3869.1	chr10	-	201	1	Intergenic	novelGene_2940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCATGGAAATGCTATAA	NA	False	NA	NA	False	AAAAAG	-8	NA	120348691	120348490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120348500_120348700
ES.387.1	chr1	-	268	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCACTATTGCTCTGTAG	2801	False	NA	NA	False	NA	NA	NA	43931074	43930806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43930800_43931100
ES.387.2	chr1	-	158	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	2802	False	NA	NA	False	NA	NA	NA	43931073	43930915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43930900_43931100
ES.3870.1	chr10	+	3427	10	Intergenic	novelGene_2941	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	35.9787317147571	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	120358825	120376131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120358847_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690
ES.3870.10	chr10	+	1247	8	Intergenic	novelGene_2950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_7	36.3778358176447	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACCCAGTCTTCAAATG	NA	False	NA	13	True	AATAAA	-13	NA	120359239	120374519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440_120373621_120374077
ES.3870.12	chr10	+	1431	7	Intergenic	novelGene_2951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	29.3338068143605	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATGACTATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	120359240	120374247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440
ES.3870.13	chr10	+	1597	11	Intergenic	novelGene_2952	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_8	31.0845620847391	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCCAGTCTTCAAATGA	NA	False	NA	14	True	AATAAA	-14	NA	120359241	120374520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120374077
ES.3870.14	chr10	+	3637	4	Intergenic	novelGene_2953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	50.0288805480283	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGTGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	120359242	120363699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360829_120360920
ES.3870.15	chr10	+	1437	10	Intergenic	novelGene_2954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_7	31.3970982381776	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359242	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120373440_120373621_120373690_120373794_120374077
ES.3870.16	chr10	+	7094	8	Intergenic	novelGene_2955	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_7	34.5572580166982	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGCCCATATTTAATT	NA	False	NA	NA	False	AATAAA	-36	NA	120359242	120378833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370315_120372451
ES.3870.17	chr10	+	6288	11	Intergenic	novelGene_2956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_5	42.608097821893	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATGAATTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	120359243	120378808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120367457_120367857_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120377120_120377467
ES.3870.18	chr10	+	3788	11	Intergenic	novelGene_2957	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_10	35.5747101182849	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATTTTTTTCATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	120359243	120378815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120376179
ES.3870.19	chr10	+	4918	7	Intergenic	novelGene_2959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_5	13.7285185734741	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359244	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224
ES.3870.2	chr10	+	3267	7	Intergenic	novelGene_2942	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_6	29.3338068143605	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGTAGAAAGGACATAGT	NA	False	NA	NA	False	NA	NA	NA	120359225	120376068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440
ES.3870.20	chr10	+	1674	4	Intergenic	novelGene_2958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_3	13.4246870437348	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAAGTCTCTTTGCCTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	120359244	120364979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521
ES.3870.21	chr10	+	3232	10	Intergenic	novelGene_2961	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_9	37.5187196075193	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATGAATTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	120359246	120378808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120376622
ES.3870.22	chr10	+	1331	9	Intergenic	novelGene_2960	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_7	36.5562494657206	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGTCTTCAAATGATTG	NA	False	NA	17	True	AATAAA	-17	NA	120359246	120374523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120373440_120373621_120374077
ES.3870.23	chr10	+	970	5	Intergenic	novelGene_2962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_3	11.8532695911297	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTCTTTGCCTCCCTT	NA	False	NA	NA	False	AGTAAA	-27	NA	120359250	120364982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338
ES.3870.24	chr10	+	2145	8	Intergenic	novelGene_2963	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_7	39.2968815296988	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359250	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120373440_120373621_120377467
ES.3870.25	chr10	+	3508	9	Intergenic	novelGene_2964	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_8	39.1373782336017	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATGAATTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	120359252	120378808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120373440_120373621_120376179
ES.3870.26	chr10	+	2768	8	Intergenic	novelGene_2965	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_7	26.6174716289577	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359254	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451
ES.3870.27	chr10	+	5299	8	Intergenic	novelGene_2966	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_5	41.9523539268061	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359262	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120367457_120367857_120369971_120370079_120370224
ES.3870.28	chr10	+	3673	3	Intergenic	novelGene_2967	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	54.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120359264	120363679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359477_120360126_120360829_120360920
ES.3870.29	chr10	+	1778	9	Intergenic	novelGene_2968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_8	31.4880929876676	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACCGGCTTCGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	120359264	120374370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440
ES.3870.3	chr10	+	3460	12	Intergenic	novelGene_2944	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_10	37.9492919608598	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359226	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120376179_120377120_120377467
ES.3870.30	chr10	+	3470	12	Intergenic	novelGene_2969	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_6	45.4259910310939	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359267	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120361311_120361378_120363521_120363638_120364338_120364544_120365443_120365603_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120376622
ES.3870.31	chr10	+	5572	8	Intergenic	novelGene_2970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	43.9624143735421	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359267	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120372451_120372613_120373440_120373621_120374077
ES.3870.32	chr10	+	3766	11	Intergenic	novelGene_2971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	44.963207180983	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359268	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120361311_120361378_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120373621_120376622_120377120_120377467
ES.3870.33	chr10	+	3841	12	Intergenic	novelGene_2972	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_7	41.0937247627425	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359269	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372049_120372126_120372451_120372613_120373440_120373621_120373690_120373794_120376179
ES.3870.34	chr10	+	1504	9	Intergenic	novelGene_2973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	32.2468506214173	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCCAGTCTTCAAATGAT	NA	False	NA	15	True	AATAAA	-15	NA	120360060	120374521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373443_120373621_120373690_120373794_120374077
ES.3870.35	chr10	+	4283	3	Intergenic	novelGene_2976	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	43	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	5008	False	NA	16	True	AATAAA	-16	NA	120369163	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120370079_120370224_120371522_120372451
ES.3870.36	chr10	+	4529	1	Intergenic	novelGene_2977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTGTTTGTTTG	7448	False	NA	NA	False	AATAAA	-16	NA	120371603	120376132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120371600_120376100
ES.3870.37	chr10	+	4700	5	Intergenic	novelGene_2978	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_4	15.481844205391	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATGAATTTTTT	8423	False	NA	NA	False	AATAAA	-11	NA	120372578	120378808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120372613_120373440_120373621_120373690_120373794_120374077_120377120_120377467
ES.3870.38	chr10	+	5132	2	Intergenic	novelGene_2979	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	9183	False	NA	NA	False	AATAAA	-21	NA	120373338	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120377120_120377467
ES.3870.4	chr10	+	4046	12	Intergenic	novelGene_2943	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_5	41.0627417536942	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359226	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120365427_120367857_120369971_120370079_120370224_120370315_120372451_120372613_120373440_120373621_120373690_120373794_120374077
ES.3870.5	chr10	+	2508	9	Intergenic	novelGene_2946	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_7	28.8866318562757	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAGTCTTCAAATGATT	NA	False	NA	16	True	AATAAA	-16	NA	120359230	120374522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120373794_120374077
ES.3870.6	chr10	+	4214	3	Intergenic	novelGene_2945	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGTGGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	120359230	120363699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359647_120359809_120360829_120360920
ES.3870.7	chr10	+	4027	11	Intergenic	novelGene_2947	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	43.7036611738651	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359233	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120360280_120360437_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373794_120376179
ES.3870.8	chr10	+	5892	11	Intergenic	novelGene_2948	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_8	31.0845620847391	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAAATGAATTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	120359234	120378808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120374077
ES.3870.9	chr10	+	9152	8	Intergenic	novelGene_2949	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_7	20.1909254217769	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTTCATTTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	120359236	120378818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120373621_120373690
ES.3871.1	chr10	-	4781	1	Intergenic	novelGene_2974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120373142	120368361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120368400_120373100
ES.3871.2	chr10	-	6132	2	Intergenic	novelGene_2975	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-39	NA	120374675	120368397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120370074_120370219
ES.3872.1	chr10	-	181	1	Intergenic	novelGene_2980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATATATTTGCT	NA	False	NA	NA	False	NA	NA	NA	120390536	120390355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120390400_120390500
ES.3873.1	chr10	-	171	1	Intergenic	novelGene_2981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	120424990	120424819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120424800_120425000
ES.3874.1	chr10	-	178	1	Intergenic	novelGene_2982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120447572	120447394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120447400_120447600
ES.3875.1	chr10	-	2790	1	Genic_Genomic	ENSMUSG00000112716.2	novel	NA	NA	NA	NA	-1720	-1824	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGGTGTGAAAGTTTA	3442	False	NA	NA	False	NA	NA	NA	120473541	120470751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_120470800_120473500
ES.3875.2	chr10	-	1775	2	NNC	ENSMUSG00000112716.2	novel	1514	2	NA	NA	-1650	-1824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGGTGTGAAAGTTTA	3512	False	NA	NA	False	NA	NA	NA	120473471	120470751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120472392_120473336
ES.3876.1	chr10	+	2754	3	Antisense	novelGene_ENSMUSG00000103213.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACACTCAGTAGTGAC	NA	False	NA	NA	False	AATAAA	-40	NA	120496638	120538645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_120496775_120496854_120496902_120536074
ES.3877.1	chr10	-	2217	5	Intergenic	novelGene_2983	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGCTAATATTTTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	120581220	120573119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120573539_120573926_120574696_120574743_120575444_120575702_120575927_120581115
ES.3877.2	chr10	-	305	1	Intergenic	novelGene_2984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120575033	120574728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120574700_120575000
ES.3878.1	chr10	-	156	1	Intergenic	novelGene_2985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	120594352	120594196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120594200_120594400
ES.3879.1	chr10	+	103	1	Antisense	novelGene_ENSMUSG00000051236.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATGGA	2207	False	NA	NA	False	NA	NA	NA	120619116	120619219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_120619100_120619200
ES.388.1	chr1	+	4380	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-403	654	-35	10	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGTGTGGCTTAATACA	2909	False	NA	14	True	ATTAAA	-27	NA	43972771	44041506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.11	chr1	+	4287	31	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-13	22708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	99.4224488399543	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTGTGGTGTGATC	3291	False	NA	NA	False	AATAAA	-36	NA	43973153	44064868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263_44041326_44043347_44043432_44064482
ES.388.14	chr1	+	4612	30	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	103.702733026178	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	3294	False	NA	7	True	AATAAA	-17	NA	43973156	44042159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988546_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.15	chr1	+	3848	28	NIC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-7	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	80.4187258526524	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGGCGTGTGGCTT	3297	False	NA	8	True	ATTAAA	-21	NA	43973159	44041500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.16	chr1	+	4945	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-15	-299	-7	299	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTTGCATGCAGTT	3297	False	NA	NA	False	AATACA	-11	NA	43973159	44042459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.17	chr1	+	3978	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	79.118057937722	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACTCAGTGGCGTGTG	3298	False	NA	4	True	ATTAAA	-17	NA	43973160	44041496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999376_44000034_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.2	chr1	+	4941	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-305	-5	63	5	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTCTTAATTTTTCAT	3007	False	NA	13	True	AATAAA	-23	NA	43972869	44042165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.21	chr1	+	3874	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	-14	771	-6	-107	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATAGTGAATGGATATA	3298	False	NA	NA	False	AAAACA	-6	NA	43973160	44041389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.22	chr1	+	4007	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	98.2902822858737	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3298	False	NA	5	True	ATTAAA	-18	NA	43973160	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019453_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.26	chr1	+	5954	30	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_19	119.463376046423	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACTCAGTGGCGTGTG	3304	False	NA	4	True	ATTAAA	-17	NA	43973166	44041496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44019700_44019911_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.27	chr1	+	3852	28	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	79.5803809807231	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGCGTGTGGCTTAA	3304	False	NA	10	True	ATTAAA	-23	NA	43973166	44041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.28	chr1	+	4518	23	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	1	17894	1	-5507	5prime_fragment	FALSE	canonical	3	307	junction_13	33.5137815490733	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTATACAATCAGACTC	3305	False	NA	NA	False	NA	NA	NA	43973167	44024237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673
ES.388.3	chr1	+	4723	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	-44	-30	-44	1	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATTGGTCTTAATTTT	3260	False	NA	9	True	AATAAA	-19	NA	43973122	44042161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.31	chr1	+	3981	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_26	73.5139511957299	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3311	False	NA	6	True	ATTAAA	-19	NA	43973173	44041498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.34	chr1	+	7508	27	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	0	-2	intron_retention	FALSE	canonical	3	83	junction_22	65.7350000888902	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAACTCAGTGGCGTG	3311	False	NA	2	True	ATTAAA	-15	NA	43973173	44041494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44040599_44041263
ES.388.37	chr1	+	3900	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	7	742	0	-107	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATAGTGAATGGATATA	3311	False	NA	NA	False	AAAACA	-6	NA	43973173	44041389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.4	chr1	+	5003	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	-22	-332	-22	303	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCATGCAGTTTTTG	3282	False	NA	NA	False	AATACA	-15	NA	43973144	44042463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.40	chr1	+	3988	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	78.9769648023255	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGCGTGTGGCTTAAT	3312	False	NA	11	True	ATTAAA	-24	NA	43973174	44041503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019453_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.41	chr1	+	7085	28	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_22	99.2685733606788	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3312	False	NA	6	True	ATTAAA	-19	NA	43973174	44041498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44025661_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.42	chr1	+	3877	28	NIC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	0	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	80.3908831989606	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGCGTGTGGCTTAA	3312	False	NA	10	True	ATTAAA	-23	NA	43973174	44041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.44	chr1	+	4216	29	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	1	3	intron_retention	FALSE	canonical	3	28	junction_26	100.834546993314	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGTGGCGTGTGGCT	3313	False	NA	7	True	ATTAAA	-20	NA	43973175	44041499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.46	chr1	+	1406	7	FSM	ENSMUSG00000041763.15	ENSMUST00000186028.2	1389	7	1	-18	1	18	multi-exon	FALSE	canonical	3	317	junction_5	33.8070505466932	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTTATACTCATTGT	3313	False	NA	NA	False	AAAAAG	-41	NA	43973175	43996179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630
ES.388.47	chr1	+	2278	17	NNC	ENSMUSG00000041763.15	novel	2904	24	NA	NA	2	-282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.742060812503	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATATAAATAAATCTAAA	3314	False	NA	NA	False	NA	NA	NA	43973176	44016230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016044
ES.388.48	chr1	+	6586	27	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_18	102.098832498874	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	3314	False	NA	6	True	AATAAA	-16	NA	43973176	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.49	chr1	+	4488	28	NIC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	80.4187258526524	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	3315	False	NA	6	True	AATAAA	-16	NA	43973177	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.5	chr1	+	4042	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	-22	629	-22	6	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGCGTGTGGCTTAA	3282	False	NA	10	True	ATTAAA	-23	NA	43973144	44041502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.51	chr1	+	5827	29	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	4	2	intron_retention	FALSE	canonical	3	83	junction_23	64.9713437617238	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3316	False	NA	6	True	ATTAAA	-19	NA	43973178	44041498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.53	chr1	+	6158	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_22	92.9903714567991	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3316	False	NA	8	True	AATAAA	-18	NA	43973178	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024555_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.54	chr1	+	4106	30	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	99.8942603858007	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3322	False	NA	5	True	ATTAAA	-18	NA	43973184	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43975868_43976017_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.56	chr1	+	5551	28	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-8	2	intron_retention	FALSE	canonical	3	77	junction_21	83.9155137210796	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3322	False	NA	6	True	ATTAAA	-19	NA	43973184	44041498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.57	chr1	+	3841	23	NIC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-7	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	86.5471733977517	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	3323	False	NA	6	True	AATAAA	-16	NA	43973185	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.58	chr1	+	5676	28	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-6	2	intron_retention	FALSE	canonical	3	77	junction_22	83.2397664014167	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCAGTGGCGTGTGGC	3324	False	NA	6	True	ATTAAA	-19	NA	43973186	44041498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44040599_44041263
ES.388.59	chr1	+	4542	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	78.7422817727268	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	3324	False	NA	6	True	AATAAA	-16	NA	43973186	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988546_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.6	chr1	+	4213	26	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	83.0445085481274	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	3287	False	NA	6	True	AATAAA	-16	NA	43973149	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996690_44009641_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.63	chr1	+	3945	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	78.0801115939944	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3324	False	NA	5	True	ATTAAA	-18	NA	43973186	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022742_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.64	chr1	+	6496	27	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-6	1	intron_retention	FALSE	canonical	3	28	junction_24	76.0561922442757	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3324	False	NA	5	True	ATTAAA	-18	NA	43973186	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.65	chr1	+	4217	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	12	402	-6	262	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGGTGTAGCTAAATT	3324	False	NA	NA	False	AAAACA	-41	NA	43973186	44041758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.67	chr1	+	6362	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-4	-5	intron_retention	FALSE	canonical	0	0	junction_6	119.48219489932	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCACAATTGGTCTT	3326	False	NA	3	True	AATAAA	-13	NA	43973188	44042155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993969_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44019565_44019700_44019911_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.69	chr1	+	3122	6	ISM	ENSMUSG00000041763.15	ENSMUST00000186028.2	1389	7	15	-18	-3	18	intron_retention	FALSE	canonical	3	317	junction_5	35.1988636180204	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTTATACTCATTGT	3327	False	NA	NA	False	AAAAAG	-41	NA	43973189	43996179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736
ES.388.7	chr1	+	4556	30	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	-16	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	77.7876618297335	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAGTAAATATTAAA	3288	False	NA	-16	True	NA	NA	NA	43973150	44042136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016396_44016470_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.71	chr1	+	5456	29	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_1	104.661133216311	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3331	False	NA	5	True	ATTAAA	-18	NA	43973193	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973410_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.72	chr1	+	5897	30	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	118.692740748127	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3331	False	NA	8	True	AATAAA	-18	NA	43973193	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43997689_43998961_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019453_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.74	chr1	+	4181	31	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	131.321133105072	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	3335	False	NA	5	True	ATTAAA	-18	NA	43973197	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992529_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44019700_44019911_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.78	chr1	+	3907	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	78.3441843692931	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAGAACTCAGTGGCGT	3342	False	NA	1	True	ATTAAA	-14	NA	43973204	44041493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017663_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.8	chr1	+	5081	30	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-14	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.104812523138	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTTGCATGCAGTT	3290	False	NA	NA	False	AATACA	-11	NA	43973152	44042459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43990872_43991002_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.81	chr1	+	4421	31	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_30	101.963877045855	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3350	False	NA	8	True	AATAAA	-18	NA	43973212	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263_44041326_44041536
ES.388.84	chr1	+	4558	29	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	79.0503181911525	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3355	False	NA	8	True	AATAAA	-18	NA	43973217	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030490_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.85	chr1	+	4372	30	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_29	77.4741259405339	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3360	False	NA	8	True	AATAAA	-18	NA	43973222	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263_44041326_44041536
ES.388.87	chr1	+	4390	28	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	6063	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_15	77.8640967217821	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	9405	False	NA	7	True	AATAAA	-17	NA	43979267	44042159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016369_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.88	chr1	+	4433	29	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	6101	-29	6063	0	3prime_fragment	FALSE	canonical	3	77	junction_22	82.4667527317673	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	9405	False	NA	8	True	AATAAA	-18	NA	43979267	44042160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.9	chr1	+	3748	28	NIC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-14	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	80.1646453891637	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGGCGTGTGGCTT	3290	False	NA	8	True	ATTAAA	-21	NA	43973152	44041500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.90	chr1	+	4168	26	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	17089	2	17059	-2	3prime_fragment	FALSE	canonical	3	286	junction_20	40.4398615230072	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACAATTGGTCTTAAT	5219	False	NA	6	True	AATAAA	-16	NA	43990263	44042158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.91	chr1	+	4548	1	NIC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	18351	-58	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCAAAATTTAAAGTTAAA	6511	False	NA	NA	False	NA	NA	NA	43991555	43996103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_43991600_43996100
ES.388.92	chr1	+	6250	19	NNC	ENSMUSG00000041763.15	novel	4631	29	NA	NA	-12128	1	intron_retention	FALSE	canonical	3	28	junction_16	88.1956299132926	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTCAGTGGCGTGTGG	NA	False	NA	5	True	ATTAAA	-18	NA	43998401	44041497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_43999372_44000027_44000128_44008041_44008191_44009560_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
ES.388.94	chr1	+	2482	13	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	43191	56	5836	-27	3prime_fragment	FALSE	canonical	3	286	junction_7	42.1106347085336	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCACTCTGATACCTTA	NA	False	NA	-48	True	NA	NA	NA	44016365	44042104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.95	chr1	+	1853	7	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	51199	-28	1921	-1	3prime_fragment	FALSE	canonical	3	83	junction_1	124.77936082898	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAATTGGTCTTAATT	NA	False	NA	7	True	AATAAA	-17	NA	44024365	44042159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.388.96	chr1	+	3909	6	ISM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	54188	4	4918	-4	3prime_fragment	FALSE	canonical	3	376	junction_2	27.4444894286631	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTCACAATTGGTCTTA	NA	False	NA	4	True	AATAAA	-14	NA	44027362	44042156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ES.3880.1	chr10	+	178	1	Intergenic	novelGene_2986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120658242	120658420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120658200_120658400
ES.3881.1	chr10	+	2894	4	NNC	ENSMUSG00000087480.2	novel	2971	3	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAATCATGAAAAGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	120693561	120699231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_120693667_120694852_120694965_120696505_120696811_120696859
ES.3882.1	chr10	+	156	1	Intergenic	novelGene_2989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	120804069	120804225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120804100_120804200
ES.3883.1	chr10	+	1729	1	Antisense	novelGene_ENSMUSG00000048661.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTTTATTGCCCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	120814318	120816047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_120814300_120816000
ES.3884.1	chr10	-	5062	8	Fusion	ENSMUSG00000048661.15_ENSMUSG00000051236.14	novel	3843	7	NA	NA	1	-3	multi-exon	TRUE	non_canonical	0	0	junction_1	0.494871659305393	264	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTTCTCTGCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	120815236	120617003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_120617706_120617762_120620144_120627306_120627405_120661012_120661042_120685880_120685959_120687888_120687998_120706939_120707057_120813688
ES.3884.10	chr10	-	4836	14	FSM	ENSMUSG00000048661.15	ENSMUST00000119093.2	4370	14	-27	-439	-27	0	multi-exon	FALSE	canonical	0	0	junction_9	46.9047883653432	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815264	120759317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120772980_120773047_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.11	chr10	-	7070	9	ISM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	41574	0	41574	0	3prime_fragment	FALSE	canonical	3	115	junction_3	10.9287464971972	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	9650	False	NA	-1	True	ATTAAA	-24	NA	120773663	120759317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534
ES.3884.12	chr10	-	5840	12	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	803	-5	intron_retention	FALSE	canonical	3	97	junction_11	16.8792503064885	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120814434	120759322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.13	chr10	-	4168	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	435	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	40.7628507344616	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120814802	120759322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120788122_120788161_120813688
ES.3884.14	chr10	-	4669	12	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	39.094925797864	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120815236	120759322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120785201_120785269_120788122_120788161_120813688
ES.3884.15	chr10	-	4801	14	NNC	ENSMUSG00000048661.15	novel	4370	14	NA	NA	-109	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.1693910934509	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCGTCTTTGTTT	NA	False	NA	-6	True	ATTAAA	-19	NA	120815346	120759322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120761096_120761141_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.16	chr10	-	3500	14	NNC	ENSMUSG00000048661.15	novel	4370	14	NA	NA	1299	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.9047883653432	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACATGCGTCTTTGTT	NA	False	NA	-7	True	ATTAAA	-18	NA	120813938	120759323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120779814_120779877_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.17	chr10	-	4228	13	NNC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	22328	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.3410520294577	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACATGCGTCTTTGTT	NA	False	NA	-7	True	ATTAAA	-18	NA	120792909	120759323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120791869
ES.3884.18	chr10	-	4423	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-53	373	-53	66	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATGTGCATCATAGT	NA	False	NA	NA	False	NA	NA	NA	120815290	120759690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.19	chr10	-	2582	8	NNC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	45790	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	46.0983863545113	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCTGTATTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	120769447	120759699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767750_120767832_120767935_120769299
ES.3884.2	chr10	-	3700	7	FSM	ENSMUSG00000051236.14	ENSMUST00000092143.12	3843	7	139	4	139	-4	multi-exon	FALSE	canonical	0	0	junction_2	1.34370962471642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTCTTCTCTGCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	120734867	120617004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120620144_120627306_120627405_120661012_120661042_120685880_120685959_120687888_120687998_120706939_120707057_120734737
ES.3884.20	chr10	-	4320	13	NNC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.2706490069851	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATGTCTCAGATGCTA	NA	False	NA	NA	False	AATAAA	-38	NA	120815240	120759758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767131_120767625_120767729_120767832_120767935_120769299_120769446_120769524_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.21	chr10	-	3906	8	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-22	-21	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	47.3760466472074	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTTTAAATTCTCA	NA	False	NA	NA	False	AATAAA	-19	NA	120815259	120759777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120813688
ES.3884.22	chr10	-	3768	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-64	1039	-64	-600	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTGAAAAGCTGTAT	NA	False	NA	NA	False	AATAAA	-26	NA	120815301	120760356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.23	chr10	-	181	1	Intergenic	novelGene_2988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9879	False	NA	NA	False	NA	NA	NA	120772177	120771996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120772000_120772200
ES.3884.24	chr10	-	3524	4	ISM	ENSMUSG00000048661.15	ENSMUST00000119093.2	4370	14	3	21547	3	-21547	5prime_fragment	FALSE	canonical	3	97	junction_3	1.69967317119759	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCAAGTTGGGGAGGA	NA	False	NA	NA	False	NA	NA	NA	120815234	120781303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.25	chr10	-	167	1	Intergenic	novelGene_2990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGATTAATTCGTAGGT	534	False	NA	NA	False	NA	NA	NA	120805068	120804901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120804900_120805100
ES.3884.3	chr10	-	3329	3	NIC	ENSMUSG00000051236.14	novel	3843	7	NA	NA	-1612	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTCTCTCTTCTCTG	NA	False	NA	NA	False	AATAAA	-11	NA	120687985	120617009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120620144_120627306_120627405_120687888
ES.3884.4	chr10	-	177	1	Intergenic	novelGene_2987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTTGCCTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	120748576	120748399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120748400_120748600
ES.3884.5	chr10	-	4817	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	-54	-20	-54	20	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTTAGGTGTTGTGT	NA	False	NA	19	True	ATTAAA	-44	NA	120815291	120759297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.6	chr10	-	4675	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-21	16	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	38.3198382042513	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACATGTTAGGTGTT	NA	False	NA	15	True	ATTAAA	-40	NA	120815258	120759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120813688
ES.3884.7	chr10	-	4631	12	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-18	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	39.0543169114694	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACATGTTAGGTGTT	NA	False	NA	15	True	ATTAAA	-40	NA	120815255	120759301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ES.3884.8	chr10	-	4374	8	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	47.3760466472074	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815267	120759317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120813688
ES.3884.9	chr10	-	4741	12	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	37.9301227901523	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815273	120759317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120813688
ES.3885.1	chr10	+	1204	5	Intergenic	novelGene_2991	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAACAAAACTAAATTATG	NA	False	NA	NA	False	NA	NA	NA	120847287	120865869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_120847370_120858898_120859206_120859676_120859780_120861977_120862105_120865284
ES.3886.1	chr10	-	86	1	Intergenic	novelGene_2992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGGTGTCTCACT	NA	False	NA	NA	False	NA	NA	NA	120847389	120847303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120847300_120847400
ES.3887.1	chr10	-	117	1	Intergenic	novelGene_2993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGCCGCATGGCCAAA	NA	False	NA	NA	False	NA	NA	NA	120853806	120853689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120853700_120853800
ES.3888.1	chr10	-	172	1	Intergenic	novelGene_2994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAATCAAAT	NA	False	NA	NA	False	NA	NA	NA	120861258	120861086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120861100_120861300
ES.3889.1	chr10	+	2242	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	46	6	-18	-1	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGTATGGGTCTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	120869910	120936549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
ES.389.1	chr1	-	450	2	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	43973065	43971391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_43971575_43972798
ES.3890.1	chr10	-	175	1	Intergenic	novelGene_2995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACTCAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	120994662	120994487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_120994500_120994700
ES.3891.1	chr10	-	5373	13	NIC	ENSMUSG00000052302.7	novel	5695	12	NA	NA	-132	-335	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.721687836487032	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGGCGGAGTCATTT	NA	False	NA	-3	True	CATAAA	-12	NA	121187315	121100059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121103530_121107899_121108107_121111632_121111773_121115002_121115116_121124784_121124891_121130493_121130663_121132596_121132766_121137841_121138028_121140250_121140377_121142060_121142127_121142726_121142789_121183009_121183175_121186921
ES.3891.2	chr10	-	3876	13	NIC	ENSMUSG00000052302.7	novel	5695	12	NA	NA	-151	938	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.721687836487032	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGGTCTATTGCTCT	NA	False	NA	NA	False	NA	NA	NA	121187334	121101575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121103530_121107899_121108107_121111632_121111773_121115002_121115116_121124784_121124891_121130493_121130663_121132596_121132766_121137841_121138028_121140250_121140377_121142060_121142127_121142726_121142789_121183009_121183175_121186921
ES.3891.3	chr10	-	183	1	Intergenic	novelGene_2996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATATTATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	121170520	121170337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121170300_121170500
ES.3891.4	chr10	-	130	1	Intergenic	novelGene_2997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAGTCCTACATT	NA	False	NA	NA	False	NA	NA	NA	121183671	121183541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121183500_121183700
ES.3891.5	chr10	-	160	1	Intergenic	novelGene_2998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTCCTGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	121183848	121183688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121183700_121183800
ES.3892.1	chr10	+	169	1	Intergenic	novelGene_2999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	121192879	121193048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121192900_121193000
ES.3893.1	chr10	+	3868	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	-5	-8	-5	4	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTTAGTC	NA	False	NA	12	True	ATTAAA	-24	NA	121200989	121233158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.10	chr10	+	3746	14	NIC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	59.8894444967573	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAATGTGTCCTTTGTT	NA	False	NA	5	True	ATTAAA	-17	NA	121200999	121233151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_121201264_121207048_121207109_121210294_121210470_121212112_121212179_121212540_121212640_121213999_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.12	chr10	+	1829	13	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	21	4211	2	-4211	5prime_fragment	FALSE	canonical	3	144	junction_4	13.4997427959038	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTGGTGGCTGCTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	121201015	121228939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585
ES.3893.14	chr10	+	3950	15	NIC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	9	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	56.7553377872684	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAATGTGTCCTTTGTT	NA	False	NA	5	True	ATTAAA	-17	NA	121201022	121233151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_121201264_121206201_121206324_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.15	chr10	+	3749	15	NNC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	43.8273514451179	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCAATGTGTCCTTTGT	NA	False	NA	4	True	ATTAAA	-16	NA	121201030	121233150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952_121231251_121231320
ES.3893.16	chr10	+	3774	14	NIC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	31	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	44.9581001514829	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAATGTGTCCTTTGTT	NA	False	NA	5	True	ATTAAA	-17	NA	121201044	121233151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_121201264_121207048_121207109_121210294_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.17	chr10	+	4406	13	NNC	ENSMUSG00000034707.8	novel	802	6	NA	NA	2041	-4210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4520504365742	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTGGCTGCTGTGA	371	False	NA	NA	False	AATAAA	-22	NA	121203121	121228940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121205946_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585
ES.3893.18	chr10	+	4258	11	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	6530	4212	-2723	-4212	internal_fragment	FALSE	canonical	3	144	junction_2	10.363879582473	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTTTGGTGGCTGCTGT	4774	False	NA	NA	False	AATAAA	-20	NA	121207524	121228938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585
ES.3893.19	chr10	+	4083	12	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	7044	1667	-2209	-1667	3prime_fragment	FALSE	canonical	3	144	junction_2	10.1655714534504	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTGGTGTGGTTAAT	5288	False	NA	NA	False	NA	NA	NA	121208038	121231483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.20	chr10	+	3645	12	NNC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	-102	4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	46.2876382476516	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTTAGTC	7395	False	NA	12	True	ATTAAA	-24	NA	121210145	121233158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230958
ES.3893.21	chr10	+	5263	11	NNC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	-76	-1	intron_retention	FALSE	canonical	0	0	junction_1	49.7292670366254	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGCAATGTGTCCTTTG	7421	False	NA	3	True	ATTAAA	-15	NA	121210171	121233149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121212183_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.23	chr10	+	3321	11	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	11116	0	-868	0	3prime_fragment	FALSE	canonical	3	144	junction_1	10.2781321260237	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCAATGTGTCCTTTGT	9360	False	NA	4	True	ATTAAA	-16	NA	121212110	121233150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.24	chr10	+	3257	10	ISM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	11545	-3	-439	-1	3prime_fragment	FALSE	canonical	3	153	junction_9	8.94427190999916	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATGTGTCCTTTGTTTT	9789	False	NA	7	True	ATTAAA	-19	NA	121212539	121233153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.25	chr10	+	5190	4	ISM	ENSMUSG00000034707.8	ENSMUST00000219216.2	3013	6	4690	-4	4690	4	intron_retention	FALSE	canonical	3	156	junction_3	8.25967446224258	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTTGTTTTTAGTC	NA	False	NA	12	True	ATTAAA	-24	NA	121223709	121233158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121224108_121226528_121226637_121227275_121227387_121228585
ES.3893.26	chr10	+	2367	2	ISM	ENSMUSG00000034707.8	ENSMUST00000219216.2	3013	6	9564	-2	9564	2	3prime_fragment	FALSE	canonical	3	153	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCCTTTGTTTTTAG	NA	False	NA	10	True	ATTAAA	-22	NA	121228583	121233156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121228747_121230952
ES.3893.3	chr10	+	2081	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	0	1774	0	-1774	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAAGCACTGTATAG	NA	False	NA	NA	False	GATAAA	-27	NA	121200994	121231376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.4	chr10	+	2187	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	1	1667	1	-1667	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTGGTGTGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	121200995	121231483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.5	chr10	+	3002	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	1	852	1	-852	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTCTGGGATTGAGATGT	NA	False	NA	NA	False	AATAAA	-17	NA	121200995	121232298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.6	chr10	+	3805	14	NNC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.4353041577288	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGCAATGTGTCCTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	121200995	121233149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212588_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.7	chr10	+	4795	16	NNC	ENSMUSG00000034707.8	novel	3855	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1970448591935	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTCCTTTGTTTTTA	NA	False	NA	9	True	ATTAAA	-21	NA	121200995	121233155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121201264_121206201_121206324_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121216945_121217197_121218379_121219062_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3893.8	chr10	+	2894	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	1	960	1	-960	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGATACCGGCTTC	NA	False	NA	NA	False	ACTAAA	-12	NA	121200995	121232190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ES.3894.1	chr10	+	153	1	Intergenic	novelGene_3000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTGGGACCAG	NA	False	NA	NA	False	NA	NA	NA	121235339	121235492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121235300_121235500
ES.3895.1	chr10	+	172	1	Intergenic	novelGene_3001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	121237664	121237836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121237700_121237800
ES.3896.1	chr10	+	208	1	Intergenic	novelGene_3002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAATCCCTAAAC	NA	False	NA	NA	False	AAAACA	-8	NA	121278275	121278483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121278300_121278500
ES.3897.1	chr10	+	181	1	Intergenic	novelGene_3003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121308502	121308683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121308500_121308700
ES.3898.1	chr10	+	158	1	Intergenic	novelGene_3004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121327731	121327889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121327700_121327900
ES.3899.1	chr10	-	3962	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	-440	0	-440	0	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTCTTTATTTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	121312692	121246254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
ES.3899.2	chr10	-	3370	6	Fusion	ENSMUSG00000118419.2_ENSMUSG00000025795.9	novel	3522	5	NA	NA	-10300	0	multi-exon	FALSE	canonical	0	0	junction_4	24.3770383763081	103	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTCTTTATTTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	121378581	121246254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121359198_121359324_121378513
ES.3899.4	chr10	-	102	1	Antisense	novelGene_ENSMUSG00000111926.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	121341631	121341529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_121341500_121341600
ES.3899.5	chr10	-	178	1	Intergenic	novelGene_3005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	121351332	121351154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121351200_121351300
ES.39.1	chr1	-	179	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATGTGGATTCTGGG	NA	False	NA	NA	False	NA	NA	NA	6417523	6417344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6417300_6417500
ES.390.1	chr1	-	2385	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAACCCAAAAGATTTCA	NA	False	NA	NA	False	NA	NA	NA	43976284	43973899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_43973900_43976300
ES.3900.1	chr10	-	202	1	Intergenic	novelGene_3006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGACTTGAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	121382038	121381836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121381800_121382000
ES.3901.1	chr10	+	2134	6	Antisense	novelGene_ENSMUSG00000020115.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6262	False	NA	NA	False	NA	NA	NA	121387437	121391563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121387495_121388100_121388202_121388312_121388414_121388932_121388973_121389648_121389729_121389808
ES.3902.1	chr10	-	3059	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	-34	-1	-34	1	multi-exon	FALSE	canonical	3	107	junction_12	17.7	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTGCTTTTGTACCT	3844	False	NA	1	True	AATAAA	-23	NA	121422726	121382358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.11	chr10	-	2218	1	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	3773	1	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCTTGTGTGCTTTTG	NA	False	NA	-4	True	AATAAA	-18	NA	121384581	121382363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121382400_121384600
ES.3902.12	chr10	-	5688	18	NIC	ENSMUSG00000020115.4	novel	3005	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	107	junction_9	17.3890949401448	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTGTGCTTTT	3888	False	NA	-5	True	AATAAA	-17	NA	121422682	121382364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121383094_121387155_121387228_121387391_121388415_121388933_121388974_121389649_121389727_121389807_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.13	chr10	-	1235	5	NIC	ENSMUSG00000020115.4	novel	3005	21	NA	NA	-596	0	intron_retention	FALSE	canonical	3	145	junction_4	10.6536378763313	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTGTGCTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121388950	121382364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388415_121388933
ES.3902.14	chr10	-	6010	20	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-9	-4	intron_retention	FALSE	non_canonical	0	0	junction_8	45.9611422051039	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAAAGGCTTGTGTGC	3915	False	NA	-9	True	AATAAA	-13	NA	121422655	121382368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388198_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121392555_121392616_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.16	chr10	-	4511	5	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-2150	-5	intron_retention	FALSE	canonical	3	132	junction_3	15.0228991875736	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTAAAAGGCTTGTGTG	NA	False	NA	-10	True	AATAAA	-12	NA	121392218	121382369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121383094_121387155_121388415_121388933_121388974_121389649_121389727_121389807
ES.3902.17	chr10	-	5950	7	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-12	-837	intron_retention	FALSE	canonical	3	111	junction_1	15.61694236683	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	3912	False	NA	NA	False	NA	NA	NA	121422658	121398913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.18	chr10	-	1229	6	ISM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	24	23776	14	1670	5prime_fragment	FALSE	canonical	3	128	junction_1	11.774548823628	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATAGACTTGTGGAGT	3902	False	NA	NA	False	AGTAAA	-15	NA	121422668	121406135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.19	chr10	-	807	4	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-15	-9948	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	61.7539922236252	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTTCATTTATTAA	3909	False	NA	NA	False	CATAAA	-37	NA	121422661	121417753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121417908_121418168_121418614_121420100_121420247_121422599
ES.3902.2	chr10	-	4075	21	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	34.8954151716239	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3901	False	NA	0	True	AATAAA	-22	NA	121422669	121382359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121392555_121392616_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.5	chr10	-	2960	21	NNC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	34.5360681027821	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3907	False	NA	0	True	AATAAA	-22	NA	121422663	121382359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391926_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3902.7	chr10	-	4955	20	NIC	ENSMUSG00000020115.4	novel	3024	21	NA	NA	-15	0	intron_retention	FALSE	canonical	3	107	junction_11	18.1066400945196	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3909	False	NA	0	True	AATAAA	-22	NA	121422661	121382359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ES.3903.1	chr10	+	147	1	Intergenic	novelGene_3008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATTAA	NA	False	NA	NA	False	NA	NA	NA	121430263	121430410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121430300_121430400
ES.3904.1	chr10	+	5336	13	Antisense	novelGene_ENSMUSG00002076911.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTCAAACTGAATGCC	NA	False	NA	NA	False	NA	NA	NA	121438897	121464760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121439224_121440253_121440489_121441485_121443048_121443414_121443543_121445030_121445091_121445600_121447617_121449126_121449300_121449393_121449576_121450908_121451129_121452519_121452586_121453032_121453094_121454997_121455080_121464535
ES.3904.2	chr10	+	2468	18	Antisense	novelGene_ENSMUSG00002076911.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTCAAACTGAATGCC	NA	False	NA	NA	False	NA	NA	NA	121439027	121464760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121439224_121440253_121440489_121441485_121441557_121442145_121442241_121442625_121442746_121442903_121443048_121443414_121443543_121445030_121445091_121445600_121445641_121447380_121447617_121449127_121449300_121449393_121449576_121450908_121451129_121452519_121452586_121453032_121453094_121454997_121455080_121458761_121458899_121464537
ES.3904.3	chr10	+	3025	3	Antisense	novelGene_ENSMUSG00000034667.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAACCAAAACCAACCC	NA	False	NA	NA	False	NA	NA	NA	121445637	121450266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121447617_121449126_121449300_121449393
ES.3904.4	chr10	+	3313	1	Antisense	novelGene_ENSMUSG00000034667.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	121446946	121450259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121446900_121450300
ES.3904.5	chr10	+	1362	2	Antisense	novelGene_ENSMUSG00000034667.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACCAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	121448804	121450260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121449300_121449393
ES.3904.6	chr10	+	3857	1	Antisense	novelGene_ENSMUSG00002076911.1_AS_novelGene_ENSMUSG00000034667.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTTTGCTATTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	121450979	121454836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121451000_121454800
ES.3905.1	chr10	-	6212	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-203	-4	-203	4	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGTGGGCCTTTTAAAA	NA	False	NA	-4	True	AATAAA	-20	NA	121462440	121423280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.100	chr10	-	5758	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2481	-5	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_21	367.408494185967	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	9370	False	NA	-13	True	AATAAA	-11	NA	121464718	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.101	chr10	-	5829	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-56	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	450.053301732139	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462293	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.102	chr10	-	6091	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-5	intron_retention	FALSE	canonical	1	1	junction_21	305.099233911004	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462385	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121454997_121455081_121458762_121458897_121462009
ES.3905.103	chr10	-	6005	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-170	-5	intron_retention	FALSE	canonical	0	0	junction_23	358.095983584509	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462407	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121462034
ES.3905.105	chr10	-	5878	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2481	-5	intron_retention	FALSE	canonical	3	139	junction_20	311.825380154235	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	9370	False	NA	-13	True	AATAAA	-11	NA	121464718	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.106	chr10	-	5707	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-154	-5	intron_retention	FALSE	canonical	2	7	junction_24	351.360441316637	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462391	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
ES.3905.107	chr10	-	7536	23	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2460	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	420.366882753271	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	9391	False	NA	-13	True	AATAAA	-11	NA	121464697	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426139_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121442241_121442625_121442746_121442903_121443049_121443411_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.108	chr10	-	6167	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-149	-5	intron_retention	FALSE	canonical	0	0	junction_3	298.704413072336	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462386	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432179_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.111	chr10	-	5947	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2481	-6	intron_retention	FALSE	canonical	3	89	junction_20	318.941932955236	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTCATTGGAGTGGG	9370	False	NA	-14	True	AATAAA	-10	NA	121464718	121423290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.113	chr10	-	6042	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-89	-6	intron_retention	FALSE	canonical	0	0	junction_13	360.942506579033	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTCATTGGAGTGGG	NA	False	NA	-14	True	AATAAA	-10	NA	121462326	121423290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443011_121443398_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.114	chr10	-	6024	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-6	intron_retention	FALSE	canonical	1	3	junction_12	299.858612515966	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTCATTGGAGTGGG	NA	False	NA	-14	True	AATAAA	-10	NA	121462306	121423290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.115	chr10	-	6009	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-6	intron_retention	FALSE	canonical	0	0	junction_23	436.476465693134	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTCATTGGAGTGGG	NA	False	NA	-14	True	AATAAA	-10	NA	121462388	121423290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.118	chr10	-	3630	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2499	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	380.410376304327	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTATTACAAAGAGCCTC	9352	False	NA	NA	False	AATAAA	-34	NA	121464736	121425510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450910_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.119	chr10	-	3756	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-113	3	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_21	347.640950407169	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCCGGAGTTATTAC	NA	False	NA	NA	False	AATAAA	-24	NA	121462350	121425520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.121	chr10	-	3815	26	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	3	combination_of_known_junctions	FALSE	canonical	3	151	junction_17	270.192008764138	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCCGGAGTTATTAC	NA	False	NA	NA	False	AATAAA	-24	NA	121462403	121425520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.122	chr10	-	3661	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	50	3	intron_retention	FALSE	non_canonical	0	0	junction_10	299.681729321106	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCCGGAGTTATTAC	NA	False	NA	NA	False	AATAAA	-24	NA	121462171	121425520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441545_121442175_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.123	chr10	-	4477	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2471	3	intron_retention	FALSE	canonical	3	18	junction_25	291.376935257408	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCCGGAGTTATTAC	9380	False	NA	NA	False	AATAAA	-24	NA	121464708	121425520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009_121462774_121464536
ES.3905.124	chr10	-	3957	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-221	1	intron_retention	FALSE	canonical	0	0	junction_24	350.644248332821	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTTCCGGAGTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	121462458	121425522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.127	chr10	-	4477	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2498	1	intron_retention	FALSE	canonical	0	0	junction_24	352.781305627155	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTTCCGGAGTTATT	9353	False	NA	NA	False	AATAAA	-22	NA	121464735	121425522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034_121462774_121464536
ES.3905.129	chr10	-	3725	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_21	341.560639418537	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTTCCGGAGTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	121462392	121425523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.13	chr10	-	6593	27	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2469	2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_26	349.753218154555	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAGTGGGCCTTTTAA	9382	False	NA	-6	True	AATAAA	-18	NA	121464706	121423282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009_121462774_121464536
ES.3905.130	chr10	-	3718	22	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-175	0	intron_retention	FALSE	canonical	0	0	junction_4	454.744711716879	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTTCCGGAGTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	121462412	121425523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435251_121435336_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451234_121462077
ES.3905.131	chr10	-	7105	24	ISM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-227	2240	-227	-1	intron_retention	FALSE	canonical	3	1147	junction_16	77.4538584515705	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462464	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.132	chr10	-	6745	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	397.651089384763	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462306	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437153_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.134	chr10	-	4137	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-204	-1	intron_retention	FALSE	canonical	1	1	junction_25	353.967040273526	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462441	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121461470_121461639_121462009
ES.3905.135	chr10	-	4014	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-1	intron_retention	FALSE	canonical	0	0	junction_24	421.32924133034	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462385	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121460576_121460684_121462009
ES.3905.136	chr10	-	3929	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-170	-1	intron_retention	FALSE	canonical	3	89	junction_20	285.738003417855	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462407	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.138	chr10	-	4484	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	-1	intron_retention	FALSE	canonical	0	0	junction_12	423.315228169269	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9368	False	NA	NA	False	AATAAA	-20	NA	121464720	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442821_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009_121462774_121464536
ES.3905.139	chr10	-	3801	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-79	-1	intron_retention	FALSE	canonical	0	0	junction_13	365.702460930407	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462316	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443082_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.14	chr10	-	5968	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-87	2	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_21	347.640950407169	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAGTGGGCCTTTTAA	NA	False	NA	-6	True	AATAAA	-18	NA	121462324	121423282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.140	chr10	-	3887	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-1	intron_retention	FALSE	canonical	1	3	junction_12	299.858612515966	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462403	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.141	chr10	-	3847	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-109	-1	intron_retention	FALSE	canonical	2	40	junction_7	293.709276136946	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462346	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438299_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.142	chr10	-	3876	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2480	-1	intron_retention	FALSE	canonical	3	239	junction_23	226.150384079448	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9371	False	NA	NA	False	AATAAA	-20	NA	121464717	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.143	chr10	-	6982	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-1	intron_retention	FALSE	canonical	1	3	junction_12	271.950422202478	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462385	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.144	chr10	-	3587	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	-1	intron_retention	FALSE	canonical	2	5	junction_23	271.566282418661	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9368	False	NA	NA	False	AATAAA	-20	NA	121464720	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121464536
ES.3905.145	chr10	-	3789	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2551	-1	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9300	False	NA	NA	False	AATAAA	-20	NA	121464788	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.146	chr10	-	4340	27	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2483	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	398.385055401008	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9368	False	NA	NA	False	AATAAA	-20	NA	121464720	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034_121462774_121464536
ES.3905.147	chr10	-	4323	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2480	-1	intron_retention	FALSE	canonical	0	0	junction_23	359.961764944865	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9371	False	NA	NA	False	AATAAA	-20	NA	121464717	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121462034_121462774_121464536
ES.3905.148	chr10	-	3854	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-165	-1	intron_retention	FALSE	canonical	3	139	junction_20	277.67891817209	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462402	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.149	chr10	-	3899	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-165	-1	intron_retention	FALSE	canonical	0	0	junction_24	360.05960154767	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462402	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.15	chr10	-	6034	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_13	298.978675266128	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAGTGGGCCTTTTAA	NA	False	NA	-6	True	AATAAA	-18	NA	121462240	121423282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443073_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.151	chr10	-	3744	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	406.557402589105	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462385	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438302_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.153	chr10	-	5389	23	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-63	-1	intron_retention	FALSE	canonical	0	0	junction_22	278.174494853099	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462300	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.154	chr10	-	3743	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2511	-1	intron_retention	FALSE	canonical	2	17	junction_7	329.380982446197	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9340	False	NA	NA	False	AATAAA	-20	NA	121464748	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.155	chr10	-	4542	1	NIC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	6652	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1671	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	8987	False	NA	NA	False	AATAAA	-20	NA	121430066	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121425500_121430100
ES.3905.156	chr10	-	3815	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-1	intron_retention	FALSE	canonical	0	0	junction_24	344.244089354568	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462388	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.157	chr10	-	3910	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-1	intron_retention	FALSE	canonical	0	0	junction_7	362.349391605978	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462385	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438348_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.158	chr10	-	3731	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2499	-1	intron_retention	FALSE	canonical	3	89	junction_20	318.941932955236	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	9352	False	NA	NA	False	AATAAA	-20	NA	121464736	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.16	chr10	-	6262	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-87	2	intron_retention	FALSE	canonical	1	1	junction_25	353.967040273526	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAGTGGGCCTTTTAA	NA	False	NA	-6	True	AATAAA	-18	NA	121462324	121423282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121461470_121461639_121462009
ES.3905.160	chr10	-	3810	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-1	intron_retention	FALSE	canonical	2	76	junction_20	287.853212978807	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462403	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.161	chr10	-	3755	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-1	intron_retention	FALSE	canonical	0	0	junction_25	354.100089805128	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462385	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121461470_121461639_121462335
ES.3905.163	chr10	-	3926	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-108	-1	intron_retention	FALSE	canonical	0	0	junction_24	417.41261352594	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTTTTCCGGAGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	121462345	121425524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.164	chr10	-	3392	22	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-100	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	317.72688252977	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462337	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439152_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.165	chr10	-	3897	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-2	intron_retention	FALSE	canonical	0	0	junction_14	362.386064470231	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462388	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445021_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.167	chr10	-	5487	13	NIC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	240	-2	intron_retention	FALSE	canonical	3	1147	junction_11	89.1052358481563	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121449258	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121439220_121440250_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127
ES.3905.168	chr10	-	5233	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	151	junction_15	280.786055696724	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462240	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.170	chr10	-	5447	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2470	-2	intron_retention	FALSE	canonical	3	239	junction_23	225.392495300128	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	9381	False	NA	NA	False	AATAAA	-19	NA	121464707	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.173	chr10	-	3805	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-113	-2	intron_retention	FALSE	canonical	2	7	junction_2	303.440361405757	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462350	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.175	chr10	-	3682	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	398.395750981358	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462306	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.177	chr10	-	3681	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-243	-2	intron_retention	FALSE	canonical	2	7	junction_24	265.472112863731	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462480	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
ES.3905.178	chr10	-	3745	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-7	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	297.4174488642	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	121462228	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437157_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.18	chr10	-	6075	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-3	1	intron_retention	FALSE	canonical	3	139	junction_19	283.64440983163	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAGTGGGCCTTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	121462224	121423283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.181	chr10	-	3694	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-2	intron_retention	FALSE	canonical	0	0	junction_7	407.269206541843	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	9372	False	NA	NA	False	AATAAA	-19	NA	121464716	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438348_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.185	chr10	-	3643	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2481	-2	intron_retention	FALSE	canonical	0	0	junction_19	389.275928184481	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTTTTCCGGAGTT	9370	False	NA	NA	False	AATAAA	-19	NA	121464718	121425525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449574_121450905_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.187	chr10	-	3800	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-63	-3	intron_retention	FALSE	canonical	0	0	junction_17	435.55972131653	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121462300	121425526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438302_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449123_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.188	chr10	-	4375	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-79	-3	intron_retention	FALSE	canonical	1	2	junction_15	381.146554034238	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121462316	121425526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.189	chr10	-	3608	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-39	-3	intron_retention	FALSE	canonical	0	0	junction_23	366.232719096563	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121462276	121425526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.190	chr10	-	3989	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-3	intron_retention	FALSE	canonical	0	0	junction_3	298.704413072336	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121462388	121425526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432236_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.191	chr10	-	3606	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_7	356.558155705349	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGTCTTTTCCGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121462206	121425526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.192	chr10	-	3768	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	-4	intron_retention	FALSE	canonical	0	0	junction_24	352.335656626683	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121462389	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.193	chr10	-	3435	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	437.25650168281	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	9372	False	NA	NA	False	AATAAA	-17	NA	121464716	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121458762_121458897_121464536
ES.3905.194	chr10	-	3625	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2437	-4	intron_retention	FALSE	non_canonical	0	0	junction_18	330.346595659602	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	9414	False	NA	NA	False	AATAAA	-17	NA	121464674	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449238_121449379_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.195	chr10	-	3545	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2436	-4	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_21	373.003862714584	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	9415	False	NA	NA	False	AATAAA	-17	NA	121464673	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.196	chr10	-	3779	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-164	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	408.251796811723	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121462401	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437259_121438130_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462035
ES.3905.197	chr10	-	3371	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2346	-4	intron_retention	FALSE	canonical	2	5	junction_23	350.836876878263	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	9505	False	NA	NA	False	AATAAA	-17	NA	121464583	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121464536
ES.3905.198	chr10	-	3865	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-155	-4	intron_retention	FALSE	canonical	0	0	junction_24	356.989726645677	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121462392	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438299_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.199	chr10	-	3840	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-175	-4	intron_retention	FALSE	canonical	0	0	junction_23	366.803398920126	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121462412	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.2	chr10	-	6701	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2480	4	intron_retention	FALSE	canonical	0	0	junction_24	352.781305627155	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGTGGGCCTTTTAAAA	9371	False	NA	-4	True	AATAAA	-20	NA	121464717	121423280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034_121462774_121464536
ES.3905.201	chr10	-	3526	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-4	intron_retention	FALSE	canonical	2	7	junction_24	343.243654853549	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	NA	False	NA	NA	False	AATAAA	-17	NA	121462403	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
ES.3905.203	chr10	-	3477	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2496	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_24	341.969895929777	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAAGTCTTTTCCGGAG	9355	False	NA	NA	False	AATAAA	-17	NA	121464733	121425527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121464536
ES.3905.205	chr10	-	3857	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-164	-5	intron_retention	FALSE	canonical	3	4	junction_24	266.046675102948	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462401	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462077
ES.3905.206	chr10	-	3689	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-149	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	393.210547162713	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462386	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.207	chr10	-	4006	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-5	intron_retention	FALSE	canonical	1	1	junction_24	266.621347060458	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462388	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121461915
ES.3905.208	chr10	-	3707	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-63	-5	intron_retention	FALSE	canonical	0	0	junction_5	303.733753173129	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462300	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.209	chr10	-	7089	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	102	-5	intron_retention	FALSE	canonical	3	537	junction_23	170.148461805626	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462119	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.210	chr10	-	3767	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	-5	intron_retention	FALSE	canonical	0	0	junction_20	306.283644809031	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462389	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.213	chr10	-	3862	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-150	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	294.304234424175	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462387	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121425780_121425828_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.214	chr10	-	4854	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-165	-5	intron_retention	FALSE	canonical	0	0	junction_23	369.40533626014	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462402	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.215	chr10	-	4846	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-5	intron_retention	FALSE	canonical	0	0	junction_2	299.958041047225	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462306	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121430645_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.216	chr10	-	4723	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	19	-5	intron_retention	FALSE	canonical	3	537	junction_23	170.324365297478	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462202	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.217	chr10	-	3924	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-5	intron_retention	FALSE	canonical	0	0	junction_24	266.812928638942	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462388	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121461997
ES.3905.218	chr10	-	3728	25	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-165	-5	combination_of_known_splicesites	FALSE	canonical	2	13	junction_16	298.011252467457	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462402	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.219	chr10	-	3618	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2467	-5	intron_retention	FALSE	canonical	0	0	junction_22	337.994194645954	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	9384	False	NA	NA	False	AATAAA	-16	NA	121464704	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121458762_121458897_121464536
ES.3905.22	chr10	-	5834	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	1	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_21	349.249517680411	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAGTGGGCCTTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	121462306	121423283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.220	chr10	-	3729	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-109	-5	intron_retention	FALSE	non_canonical	0	0	junction_18	433.040343973291	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCAAGTCTTTTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	121462346	121425528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450910_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462077
ES.3905.221	chr10	-	2769	19	NNC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	-5583	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	303.114491672253	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCAAGTCTTTTCCGG	NA	False	NA	NA	False	AATAAA	-15	NA	121455081	121425529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445088_121450905_121451129_121452519_121452590_121453036_121453094_121454997
ES.3905.222	chr10	-	6791	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-6	intron_retention	FALSE	canonical	0	0	junction_8	465.897772451211	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCAAGTCTTTTCCGG	NA	False	NA	NA	False	AATAAA	-15	NA	121462306	121425529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438299_121438933_121439260_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.224	chr10	-	3814	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	362.459643347443	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACCAAGTCTTTTCCG	NA	False	NA	NA	False	AATAAA	-14	NA	121462325	121425530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437252_121438130_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.227	chr10	-	9388	21	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-8	intron_retention	FALSE	canonical	3	151	junction_12	337.585437334018	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	9372	False	NA	NA	False	AATAAA	-13	NA	121464716	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121439220_121440250_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.229	chr10	-	3928	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-157	-8	intron_retention	FALSE	canonical	0	0	junction_24	342.704316085877	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462394	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.23	chr10	-	6082	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	1	intron_retention	FALSE	canonical	3	139	junction_20	277.67891817209	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGAGTGGGCCTTTTA	NA	False	NA	-7	True	AATAAA	-17	NA	121462389	121423283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.230	chr10	-	3840	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-8	intron_retention	FALSE	canonical	0	0	junction_24	361.998942505361	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462388	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.232	chr10	-	6791	25	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-40	-8	intron_retention	FALSE	canonical	3	151	junction_17	238.037691780805	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462277	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.233	chr10	-	4037	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-125	-8	intron_retention	FALSE	canonical	1	2	junction_16	299.842319672635	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462362	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.236	chr10	-	3471	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2481	-8	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_21	374.486955714081	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	9370	False	NA	NA	False	AATAAA	-13	NA	121464718	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.238	chr10	-	6706	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	143	-8	intron_retention	FALSE	canonical	3	89	junction_20	255.12769329608	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462078	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.239	chr10	-	3852	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-8	intron_retention	FALSE	canonical	0	0	junction_1	305.810349324959	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462388	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.24	chr10	-	6079	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-80	0	intron_retention	FALSE	canonical	2	17	junction_7	297.505085740844	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462317	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.240	chr10	-	6929	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-134	-8	intron_retention	FALSE	canonical	3	139	junction_20	245.409976795515	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462371	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.241	chr10	-	3640	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-70	-8	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_25	335.273318950375	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462307	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462077
ES.3905.242	chr10	-	5003	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	1688	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	342.273242048253	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121460533	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.243	chr10	-	3739	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-26	-8	intron_retention	FALSE	non_canonical	0	0	junction_25	294.304234424175	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462263	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009_121462156_121462200
ES.3905.246	chr10	-	3427	21	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-165	-8	intron_retention	FALSE	canonical	0	0	junction_3	385.841972185505	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462402	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.247	chr10	-	4809	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	366	-8	intron_retention	FALSE	canonical	0	0	junction_24	266.812928638942	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121461855	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121460576
ES.3905.248	chr10	-	2251	13	NNC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	-2243	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	482.117803434896	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121442746	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436131_121436378_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625
ES.3905.25	chr10	-	9690	4	NNC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_2	644.021911290464	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	2336	False	NA	-8	True	AATAAA	-16	NA	121436717	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121429629_121432088_121432777_121432902_121435540_121436696
ES.3905.251	chr10	-	3853	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-39	-8	intron_retention	FALSE	canonical	0	0	junction_25	353.703830909421	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462276	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121460381_121460438_121462009
ES.3905.254	chr10	-	3965	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-150	-8	intron_retention	FALSE	canonical	0	0	junction_23	351.583681456012	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462387	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.255	chr10	-	3808	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-61	-8	intron_retention	FALSE	canonical	0	0	junction_20	383.337533944376	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462298	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452627_121452687_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.256	chr10	-	3579	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2469	-8	intron_retention	FALSE	canonical	2	76	junction_20	320.817348086623	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	9382	False	NA	NA	False	AATAAA	-13	NA	121464706	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.257	chr10	-	3903	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-8	intron_retention	FALSE	canonical	2	17	junction_7	297.505085740844	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462388	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.258	chr10	-	3699	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	405.081870243535	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACCAAGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	121462325	121425531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450911_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.260	chr10	-	6785	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-108	-10	intron_retention	FALSE	canonical	2	7	junction_2	346.668279527051	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACACCAAGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	121462345	121425533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.262	chr10	-	3658	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	427.626004821971	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATACACCAAGTCTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	121462325	121425533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450905_121451129_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.266	chr10	-	4032	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-11	intron_retention	FALSE	canonical	0	0	junction_24	362.155389358859	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATACACCAAGTCTTT	NA	False	NA	NA	False	AATAAA	-10	NA	121462385	121425534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.268	chr10	-	3946	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-12	intron_retention	FALSE	canonical	0	0	junction_24	362.155389358859	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAATACACCAAGTCTT	NA	False	NA	NA	False	AATAAA	-9	NA	121462306	121425535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462040
ES.3905.269	chr10	-	3696	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-66	-111	intron_retention	FALSE	canonical	0	0	junction_24	266.812928638942	1670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGATGTGTATTCTATAA	NA	False	NA	NA	False	TTTAAA	-9	NA	121462303	121425634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.27	chr10	-	6032	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-61	0	intron_retention	FALSE	canonical	0	0	junction_14	471.741977203169	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462298	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436810_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443534_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449574_121450905_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.270	chr10	-	3821	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-166	2350	-166	-111	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGATGTGTATTCTATAA	NA	False	NA	NA	False	TTTAAA	-9	NA	121462403	121425634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.271	chr10	-	3630	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	335.836865159261	1669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCATTACATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	121462388	121425665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.272	chr10	-	3653	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-110	2462	-110	-223	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTAAAGTTGGGAATGT	NA	False	NA	NA	False	TATAAA	-31	NA	121462347	121425746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.273	chr10	-	3417	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-7	-315	intron_retention	FALSE	canonical	0	0	junction_24	266.812928638942	1659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATTTATCCTAGTTCCT	NA	False	NA	NA	False	TTTAAA	-30	NA	121462228	121425838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.274	chr10	-	159	1	Intergenic	novelGene_3007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1638	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAAATAAATCT	9288	False	NA	NA	False	NA	NA	NA	121426468	121426309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121426300_121426500
ES.3905.275	chr10	-	4212	22	ISM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	-176	11206	-176	3716	5prime_fragment	FALSE	canonical	3	537	junction_21	176.420351970993	1626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTCTATATAGCTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	121462413	121434490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.276	chr10	-	794	2	Intergenic	novelGene_3009	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGAGGCTGGTACTG	9827	False	NA	NA	False	AATAAA	-15	NA	121464261	121463329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121463466_121463603
ES.3905.28	chr10	-	6149	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-175	0	intron_retention	FALSE	canonical	0	0	junction_24	350.644248332821	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462412	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.29	chr10	-	5766	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	0	intron_retention	FALSE	non_canonical	0	0	junction_1	419.570148336366	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9372	False	NA	-8	True	AATAAA	-16	NA	121464716	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121425607_121425660_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436810_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121464536
ES.3905.30	chr10	-	6074	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-92	0	intron_retention	FALSE	non_canonical	0	0	junction_24	266.812928638942	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462329	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458905_121462040
ES.3905.31	chr10	-	5579	23	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	3374	0	intron_retention	FALSE	non_canonical	0	0	junction_18	427.671595738661	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121458847	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450910_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.32	chr10	-	6133	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	0	intron_retention	FALSE	non_canonical	0	0	junction_19	427.771159535745	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462385	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450910_121451129_121452519_121452596_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.33	chr10	-	8181	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2512	0	intron_retention	FALSE	canonical	0	0	junction_24	412.20438425616	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9339	False	NA	-8	True	AATAAA	-16	NA	121464749	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121460576_121462774_121464536
ES.3905.34	chr10	-	6742	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	2309	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	404.208760694548	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121459912	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432236_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.35	chr10	-	6075	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	0	intron_retention	FALSE	non_canonical	0	0	junction_4	503.926175545585	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462325	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435251_121435336_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450910_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.37	chr10	-	5815	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_22	373.799679478289	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462206	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121458762_121458897_121462009
ES.3905.38	chr10	-	5975	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	0	intron_retention	FALSE	canonical	0	0	junction_3	330.240695049333	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9372	False	NA	-8	True	AATAAA	-16	NA	121464716	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432179_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.39	chr10	-	6044	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-108	0	intron_retention	FALSE	canonical	0	0	junction_24	361.998942505361	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462345	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.4	chr10	-	6151	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	4	intron_retention	FALSE	canonical	3	89	junction_20	285.738003417855	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGTGGGCCTTTTAAAA	NA	False	NA	-4	True	AATAAA	-20	NA	121462385	121423280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.40	chr10	-	6148	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2512	0	intron_retention	FALSE	canonical	3	239	junction_23	226.150384079448	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9339	False	NA	-8	True	AATAAA	-16	NA	121464749	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.41	chr10	-	6052	23	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-174	0	intron_retention	FALSE	canonical	1	9	junction_20	310.555863275637	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462411	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121454997_121455081_121458762_121458897_121462009
ES.3905.45	chr10	-	5885	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	0	intron_retention	FALSE	canonical	2	7	junction_2	335.68054622145	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9372	False	NA	-8	True	AATAAA	-16	NA	121464716	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.46	chr10	-	6190	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-164	0	intron_retention	FALSE	canonical	1	8	junction_14	299.018809214218	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462401	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443562_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.47	chr10	-	5804	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-149	0	intron_retention	FALSE	canonical	2	7	junction_24	359.781637092402	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462386	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438302_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
ES.3905.51	chr10	-	5838	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2494	0	intron_retention	FALSE	canonical	2	5	junction_23	271.566282418661	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	9357	False	NA	-8	True	AATAAA	-16	NA	121464731	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121464536
ES.3905.52	chr10	-	6473	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	99	0	intron_retention	FALSE	canonical	0	0	junction_23	272.551217850163	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462122	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.55	chr10	-	6012	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	0	intron_retention	FALSE	canonical	0	0	junction_19	420.696592883623	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462389	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449574_121450905_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.56	chr10	-	5959	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	3	139	junction_21	341.560639418537	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462387	121423284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.57	chr10	-	5962	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-40	-1	intron_retention	FALSE	canonical	2	17	junction_7	365.158182523532	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGAGTGGGCCTTT	NA	False	NA	-9	True	AATAAA	-15	NA	121462277	121423285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.58	chr10	-	9908	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2554	-1	intron_retention	FALSE	canonical	3	18	junction_24	263.366334957391	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGAGTGGGCCTTT	9297	False	NA	-9	True	AATAAA	-15	NA	121464791	121423285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121462774_121464536
ES.3905.6	chr10	-	5994	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2512	4	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGTGGGCCTTTTAAAA	9339	False	NA	-4	True	AATAAA	-20	NA	121464749	121423280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.62	chr10	-	9024	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-2	intron_retention	FALSE	canonical	1	3	junction_12	400.677369172089	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462385	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442947_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.63	chr10	-	6175	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-88	-2	intron_retention	FALSE	canonical	0	0	junction_4	374.32259028811	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462325	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435251_121435336_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.64	chr10	-	5827	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-2	intron_retention	FALSE	non_canonical	0	0	junction_19	358.880955095914	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462388	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450910_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462335
ES.3905.66	chr10	-	5824	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2474	-2	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_21	373.003862714584	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	9377	False	NA	-10	True	AATAAA	-14	NA	121464711	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.68	chr10	-	5949	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2479	-2	intron_retention	FALSE	canonical	2	17	junction_7	329.380982446197	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	9372	False	NA	-10	True	AATAAA	-14	NA	121464716	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438320_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
ES.3905.7	chr10	-	6141	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-234	3	intron_retention	FALSE	canonical	0	0	junction_24	344.244089354568	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGTGGGCCTTTTAAA	NA	False	NA	-5	True	AATAAA	-19	NA	121462471	121423281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.74	chr10	-	5874	25	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-2	combination_of_known_splicesites	TRUE	canonical	2	13	junction_16	298.011252467457	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462306	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.77	chr10	-	6083	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-2	intron_retention	FALSE	canonical	0	0	junction_3	421.599928842499	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGGAGTGGGCCTT	NA	False	NA	-10	True	AATAAA	-14	NA	121462388	121423286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432236_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451008_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.80	chr10	-	9258	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-151	-3	intron_retention	FALSE	canonical	0	0	junction_5	270.015010434815	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	121462388	121423287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436805_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762
ES.3905.81	chr10	-	7159	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-3	intron_retention	FALSE	canonical	0	0	junction_2	361.916481982453	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	121462403	121423287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121430645_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.82	chr10	-	3639	8	NNC	ENSMUSG00000034667.9	novel	5992	25	NA	NA	1308	-3	at_least_one_novel_splicesite	FALSE	canonical	1	32	junction_7	458.444575244847	1711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	121439195	121423287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438265_121438933
ES.3905.83	chr10	-	6057	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-152	-3	intron_retention	FALSE	canonical	0	0	junction_23	366.803398920126	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTGGAGTGGGCCT	NA	False	NA	-11	True	AATAAA	-13	NA	121462389	121423287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.86	chr10	-	5866	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-36	-4	intron_retention	FALSE	canonical	0	0	junction_20	369.513536028287	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	-12	True	AATAAA	-12	NA	121462273	121423288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.87	chr10	-	5924	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-70	-4	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_7	353.633292550348	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	-12	True	AATAAA	-12	NA	121462307	121423288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438299_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.88	chr10	-	5960	26	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-110	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	398.395750981358	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCATTGGAGTGGGCC	NA	False	NA	-12	True	AATAAA	-12	NA	121462347	121423288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451123_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.91	chr10	-	7161	19	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-1585	-5	intron_retention	FALSE	canonical	3	151	junction_15	273.048321369074	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121451083	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909
ES.3905.92	chr10	-	5902	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	10	-5	intron_retention	FALSE	canonical	2	7	junction_2	303.440361405757	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462211	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.93	chr10	-	6045	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-69	-5	intron_retention	FALSE	canonical	2	12	junction_7	298.333240223449	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462306	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438302_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.94	chr10	-	6083	24	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-166	-5	intron_retention	FALSE	canonical	0	0	junction_22	305.835828305377	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462403	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121458762_121458897_121462009
ES.3905.95	chr10	-	6235	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-102	-5	intron_retention	FALSE	canonical	0	0	junction_23	272.537789821719	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462339	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.97	chr10	-	9484	24	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-63	-5	intron_retention	FALSE	canonical	0	0	junction_23	272.259980835343	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462300	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034
ES.3905.98	chr10	-	6226	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-148	-5	intron_retention	FALSE	canonical	1	2	junction_16	367.382398039004	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	False	NA	-13	True	AATAAA	-11	NA	121462385	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445795_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ES.3905.99	chr10	-	6787	27	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2491	-5	intron_retention	FALSE	canonical	0	0	junction_4	464.461024090729	1715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	9360	False	NA	-13	True	AATAAA	-11	NA	121464728	121423289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435251_121435336_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462034_121462774_121464536
ES.3906.1	chr10	+	3906	13	FSM	ENSMUSG00000047642.16	ENSMUST00000120642.9	3335	13	-146	-425	-53	425	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGGTTTTTTTTTTT	3311	False	NA	NA	False	TATAAA	-19	NA	121477552	121530245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121477975_121490653_121490814_121496978_121497052_121503311_121503712_121505061_121505136_121507613_121507759_121513154_121513262_121514248_121514339_121519800_121519925_121521442_121521518_121521725_121521801_121525674_121525854_121528263
ES.3906.2	chr10	+	157	1	Intergenic	novelGene_3010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	1428	False	NA	NA	False	NA	NA	NA	121511765	121511922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121511800_121511900
ES.3907.1	chr10	-	1273	3	Antisense	novelGene_ENSMUSG00000047642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTGGT	4727	False	NA	NA	False	NA	NA	NA	121493418	121489814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_121490799_121492206_121492422_121493344
ES.3907.2	chr10	-	1255	3	Antisense	novelGene_ENSMUSG00000047642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTGGT	4725	False	NA	NA	False	NA	NA	NA	121493420	121489814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_121490799_121492206_121492402_121493344
ES.3907.3	chr10	-	1398	3	Antisense	novelGene_ENSMUSG00000047642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	4715	False	NA	NA	False	NA	NA	NA	121493430	121490300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_121490799_121492206_121493021_121493344
ES.3908.1	chr10	-	3540	1	Intergenic	novelGene_3011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCACAATAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	121533827	121530287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121530300_121533800
ES.3908.2	chr10	-	1869	1	Intergenic	novelGene_3012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	121533809	121531940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121531900_121533800
ES.3909.1	chr10	-	478	2	Intergenic	novelGene_3013	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGATGTGTCCTTCTT	NA	False	NA	NA	False	NA	NA	NA	121556018	121554174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121554581_121555946
ES.391.1	chr1	-	1402	2	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	AATAAA	-33	NA	43999455	43997982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_43998189_43998259
ES.3910.1	chr10	+	2765	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	-54	-3292	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	69	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATATTTTATTTCCTTT	NA	False	NA	NA	False	AATAAA	-27	NA	121575787	121584996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121576116_121581235_121581522_121582845
ES.3910.10	chr10	+	878	2	ISM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	17	6914	16	-6432	5prime_fragment	FALSE	canonical	3	147	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACTGCTGATGTTCA	NA	False	NA	NA	False	NA	NA	NA	121575858	121581856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121576116_121581235
ES.3910.11	chr10	+	2781	2	NNC	ENSMUSG00000053684.9	novel	691	2	NA	NA	-2655	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGTATATATGGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	121584129	121588769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121584349_121586207
ES.3910.2	chr10	+	3146	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	-22	-1	-22	1	multi-exon	FALSE	canonical	3	147	junction_1	1	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATATATGGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	121575819	121588771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121576116_121581235_121581522_121586207
ES.3910.3	chr10	+	2811	3	NNC	ENSMUSG00000053684.9	novel	2968	3	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_1	74.5	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACATGTATATATGGTT	NA	False	NA	NA	False	AATAAA	-22	NA	121575824	121588767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121575957_121581402_121581522_121586207
ES.3910.4	chr10	+	2963	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	-13	18	-12	-5	multi-exon	FALSE	canonical	3	27	junction_1	61	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATACATGTATATATGG	NA	False	NA	NA	False	AATAAA	-20	NA	121575829	121588765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121576116_121581402_121581522_121586207
ES.3910.5	chr10	+	4034	2	ISM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	-7	3782	-7	-3300	5prime_fragment	FALSE	canonical	3	147	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAAATAGTATATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	121575834	121584988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_121576116_121581235
ES.3910.6	chr10	+	3096	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	-5	5	intron_retention	FALSE	canonical	1	2	junction_1	73.5	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATATGGTTTTTTTCTG	NA	False	NA	NA	False	AATAAA	-30	NA	121575836	121588775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121576079_121581235_121581522_121586207
ES.3910.7	chr10	+	2536	3	NNC	ENSMUSG00000053684.9	novel	2968	3	NA	NA	4	-3295	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	9	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTATATTTTATTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	121575846	121584993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121576116_121581402_121581522_121582845
ES.3910.8	chr10	+	4364	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	5	-1246	4	1233	multi-exon	FALSE	canonical	3	147	junction_1	1	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGGATGAATCCTTAAC	NA	False	NA	NA	False	NA	NA	NA	121575846	121590016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_121576116_121581235_121581522_121586207
ES.3910.9	chr10	+	3469	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	9	-7	intron_retention	FALSE	canonical	1	2	junction_1	73.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATATATACATGTATATAT	NA	False	NA	NA	False	AATAAA	-18	NA	121575851	121588763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_121576479_121581235_121581522_121586207
ES.3911.1	chr10	+	5936	1	Antisense	novelGene_ENSMUSG00000020121.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAGCAGCAGATATGTT	2065	False	NA	NA	False	AGTAAA	-33	NA	121628722	121634658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121628700_121634700
ES.3911.2	chr10	+	7206	2	Antisense	novelGene_ENSMUSG00000020121.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2571	False	NA	NA	False	NA	NA	NA	121629228	121636483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121632095_121632143
ES.3912.1	chr10	+	2272	1	Intergenic	novelGene_3016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTATTTGATTTTTGC	NA	False	NA	NA	False	AAAACA	-11	NA	121843921	121846193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121843900_121846200
ES.3913.1	chr10	+	177	1	Intergenic	novelGene_3017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGTGCACATGTGTT	NA	False	NA	NA	False	NA	NA	NA	121873377	121873554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121873400_121873600
ES.3914.1	chr10	+	6187	1	Intergenic	novelGene_3018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	121873937	121880124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_121873900_121880100
ES.3915.1	chr10	-	8397	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-526	-84	-526	84	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTTTGTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	121883746	121616811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.10	chr10	-	4955	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-517	3273	-510	976	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGTGGGCTCCACT	NA	False	NA	46	True	NA	NA	NA	121883730	121620168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.11	chr10	-	5042	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-529	3274	-529	975	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCAGTGGGCTCCAC	NA	False	NA	45	True	NA	NA	NA	121883749	121620169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.12	chr10	-	5023	22	NNC	ENSMUSG00000020121.16	novel	7787	22	NA	NA	-517	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.8292845425713	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCAGTGGGCTCCAC	NA	False	NA	45	True	NA	NA	NA	121883737	121620169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661593_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.14	chr10	-	7745	4	NNC	ENSMUSG00000020121.16	novel	1714	7	NA	NA	6775	926	intron_retention	TRUE	canonical	0	0	junction_3	23.7954243967663	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTGCCTTTTGA	NA	False	NA	-4	True	NA	NA	NA	121636234	121620218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121621681_121628090_121628695_121630511_121632063_121632106
ES.3915.15	chr10	-	4832	21	NIC	ENSMUSG00000020121.16	novel	7787	22	NA	NA	-531	926	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	12.2958326273579	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTGCCTTTTGA	NA	False	NA	-4	True	NA	NA	NA	121883751	121620218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121767218_121767415_121883031
ES.3915.16	chr10	-	4655	23	NNC	ENSMUSG00000020121.16	novel	7711	22	NA	NA	-506	924	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	12.805038393713	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGTGTTTGCCTTTT	NA	False	NA	-6	True	NA	NA	NA	121883726	121620220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031_121883426_121883669
ES.3915.17	chr10	-	4189	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-518	4116	-518	133	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGCGTATGGCTTCAG	NA	False	NA	NA	False	AATGAA	-16	NA	121883738	121621011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.18	chr10	-	4062	22	NNC	ENSMUSG00000020121.16	novel	7711	22	NA	NA	-500	96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	13.0693250107199	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGCACCCTTGTAATG	NA	False	NA	NA	False	AATAGA	-27	NA	121883720	121621048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675937_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.20	chr10	-	4056	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-517	4248	-517	1	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGGCATTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	121883737	121621143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.21	chr10	-	3553	20	NNC	ENSMUSG00000020121.16	novel	7711	22	NA	NA	-525	-6853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	12.4007416452324	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAATTACTAAAGGAAAC	NA	False	NA	NA	False	NA	NA	NA	121883745	121627997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664693_121675929_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.22	chr10	-	3756	10	ISM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-517	57330	-517	-31681	5prime_fragment	FALSE	canonical	3	31	junction_5	5.66557723732532	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAATGTCTATA	NA	False	NA	NA	False	NA	NA	NA	121883737	121674225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.23	chr10	-	1607	6	ISM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-517	88559	-517	26287	5prime_fragment	FALSE	canonical	3	31	junction_1	5.6	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGGTGTGAAGCTGTGT	NA	False	NA	NA	False	GATAAA	-18	NA	121883737	121705454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.24	chr10	-	176	1	Intergenic	novelGene_3014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	121746691	121746515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121746500_121746700
ES.3915.25	chr10	-	181	1	Intergenic	novelGene_3015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAGGAAGAATAGCAG	8040	False	NA	NA	False	NA	NA	NA	121799063	121798882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_121798900_121799100
ES.3915.4	chr10	-	6107	11	ISM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	215429	3170	-8746	1079	3prime_fragment	FALSE	canonical	3	24	junction_10	9.2655275079188	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGATTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	121667784	121620065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633
ES.3915.5	chr10	-	5058	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-517	3170	-510	1079	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATAGATTTGTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	121883730	121620065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.6	chr10	-	5142	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-526	3171	-526	1078	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATAGATTTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	121883746	121620066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ES.3915.7	chr10	-	5378	6	NIC	ENSMUSG00000020121.16	novel	7711	22	NA	NA	-1749	1071	intron_retention	FALSE	canonical	3	37	junction_5	7.81280999384984	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGATAGATTT	NA	False	NA	NA	False	NA	NA	NA	121644758	121620073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121621681_121628090_121628431_121628559_121630693_121636729_121636810_121640720_121640946_121643765
ES.3915.9	chr10	-	4777	23	NNC	ENSMUSG00000020121.16	novel	7787	22	NA	NA	-505	978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	11.7382788381706	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAGTGGGCTCCACTGG	NA	False	NA	48	True	NA	NA	NA	121883725	121620166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031_121883426_121883669
ES.3916.1	chr10	+	9702	1	Antisense	novelGene_ENSMUSG00000034620.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTGCTGGGAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	121922691	121932393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121922700_121932400
ES.3916.2	chr10	+	3483	2	Antisense	novelGene_ENSMUSG00000034620.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTGCTGGGAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	121927664	121932393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_121930596_121931841
ES.3917.1	chr10	-	4442	6	NNC	ENSMUSG00000034620.18	novel	644	4	NA	NA	14	25087	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	143.4453205929	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCAATCAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	121933017	121888931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121892283_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
ES.3917.10	chr10	-	1483	7	FSM	ENSMUSG00000034620.18	ENSMUST00000038772.13	1546	7	59	4	29	-4	multi-exon	FALSE	canonical	2	4	junction_6	137.068920214937	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACCATGTATTCATAAGT	NA	False	NA	-14	True	AATAAA	-15	NA	121933002	121917168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932252_121932367_121932804
ES.3917.11	chr10	-	6182	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	272	5528	27	-1960	5prime_fragment	FALSE	canonical	3	258	junction_4	22.2078251974389	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCATTTTCAATAAATG	NA	False	NA	NA	False	NA	NA	NA	121933004	121919546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.12	chr10	-	1167	5	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	287	10528	42	3	5prime_fragment	FALSE	canonical	3	258	junction_4	22.2078251974389	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAACTATCATATGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	121932989	121924546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.13	chr10	-	2344	4	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	29	134	intron_retention	FALSE	canonical	3	258	junction_3	23.6830928911088	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAACAGTAAGTTCTGT	NA	False	NA	NA	False	GATAAA	-18	NA	121933002	121924792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.14	chr10	-	927	4	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	262	12203	17	-1295	5prime_fragment	FALSE	canonical	3	258	junction_3	23.6830928911088	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTCAGTGGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	121933014	121926221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.15	chr10	-	5350	1	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	20	-2735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTACTCATTCCCGCCTT	NA	False	NA	NA	False	NA	NA	NA	121933011	121927661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121927700_121933000
ES.3917.2	chr10	-	3422	6	NNC	ENSMUSG00000034620.18	novel	644	4	NA	NA	39	24225	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	115.816061062359	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCGCCAAACCCAGACAC	NA	False	NA	NA	False	NA	NA	NA	121932992	121889793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_121892283_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.3	chr10	-	5575	1	Antisense	novelGene_ENSMUSG00000112184.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTCTTATTGAATTAT	NA	False	NA	NA	False	AATAAA	-32	NA	121903216	121897641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_121897600_121903200
ES.3917.4	chr10	-	1590	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	202	3001	-13	145	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGGTTGAGTGGTTAAA	NA	False	NA	NA	False	ATTAAA	-34	NA	121933074	121917019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.5	chr10	-	1493	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	160	3140	-55	6	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATAAGTGTAAATAGTT	NA	False	NA	-4	True	AATAAA	-25	NA	121933116	121917158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ES.3917.6	chr10	-	1605	1	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	6524	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTATTCATAAGTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	121918770	121917165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121917200_121918800
ES.3917.7	chr10	-	1577	6	NIC	ENSMUSG00000034620.18	novel	4793	6	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	112.932546238894	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTATTCATAAGTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	121933074	121917165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932804
ES.3917.9	chr10	-	1657	7	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	-9	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_5	138.233799533013	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTATTCATAAGTGTA	NA	False	NA	-11	True	AATAAA	-18	NA	121933040	121917165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932252_121932367_121932804
ES.3918.1	chr10	+	242	1	Intergenic	novelGene_3019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGATGGTCAAATAG	NA	False	NA	NA	False	ATTAAA	-28	NA	122093948	122094190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122093900_122094200
ES.3919.1	chr10	+	177	1	Intergenic	novelGene_3020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAATAAATCATCC	NA	False	NA	NA	False	NA	NA	NA	122122419	122122596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122122400_122122600
ES.392.1	chr1	-	6088	1	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAATACTCCATGATG	4864	False	NA	NA	False	NA	NA	NA	44015070	44008982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_44009000_44015100
ES.392.2	chr1	-	1126	2	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTATTTCTATCTC	4860	False	NA	NA	False	NA	NA	NA	44015074	44012053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_44012681_44014575
ES.392.3	chr1	-	9617	1	Antisense	novelGene_ENSMUSG00000041763.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTATTTCTATCTC	NA	False	NA	NA	False	NA	NA	NA	44021670	44012053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_44012100_44021700
ES.3920.1	chr10	+	184	1	Antisense	novelGene_ENSMUSG00000112095.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTAAAATTTTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	122400762	122400946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_122400800_122400900
ES.3921.1	chr10	+	3112	10	FSM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	1	3256	1	1090	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTCATTGTGATGTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	122514687	122778444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_122515336_122618087_122618251_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
ES.3921.10	chr10	+	3515	1	Genic_Genomic	ENSMUSG00000034613.13	novel	NA	NA	NA	NA	2720	1810	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGCACAGA	NA	False	NA	NA	False	NA	NA	NA	122650071	122653586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_122650100_122653600
ES.3921.2	chr10	+	6368	10	FSM	ENSMUSG00000034613.13	ENSMUST00000067918.12	6369	10	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	11.6428327977153	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTGGGTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	122514687	122781700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_122515336_122618087_122618251_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
ES.3921.3	chr10	+	1472	3	NNC	ENSMUSG00000034613.13	novel	3200	6	NA	NA	20	-123019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGCCGTGTATTTGTG	NA	False	NA	NA	False	AATACA	-10	NA	122514706	122524357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_122515336_122523189_122523390_122523714
ES.3921.4	chr10	+	6064	9	NIC	ENSMUSG00000034613.13	novel	6369	10	NA	NA	139	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.1734949746879	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTTGGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	122514825	122781697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_122515336_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
ES.3921.5	chr10	+	1837	1	Intergenic	novelGene_3022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGCATTTGTGACTGGG	NA	False	NA	NA	False	AATAGA	-38	NA	122542560	122544397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122542600_122544400
ES.3921.6	chr10	+	2539	9	NNC	ENSMUSG00000034613.13	novel	750	7	NA	NA	-18522	1090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.86708543593294	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTCATTGTGATGTTC	1774	False	NA	NA	False	ATTAAA	-16	NA	122628626	122778444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_122628865_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
ES.3921.7	chr10	+	2070	9	NNC	ENSMUSG00000034613.13	novel	750	7	NA	NA	-18415	728	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.86708543593294	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGGTGTTTCATTG	1881	False	NA	NA	False	AATAGA	-13	NA	122628733	122778082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_122628865_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129
ES.3921.8	chr10	+	4633	5	NNC	ENSMUSG00000034613.13	novel	403	4	NA	NA	-18390	2159	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACTAATTTATGAGAAGG	1906	False	NA	NA	False	NA	NA	NA	122628758	122718397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_122628865_122638139_122638485_122647351_122647465_122692966_122693052_122714413
ES.3921.9	chr10	+	4767	10	NNC	ENSMUSG00000034613.13	novel	750	7	NA	NA	-18380	-482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	12.2020034784821	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTGTCGTGTGCTG	1916	False	NA	NA	False	AATAAA	-14	NA	122628768	122781218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_122628865_122638139_122638485_122647351_122647465_122692966_122693052_122714413_122714533_122739996_122740061_122743411_122743520_122756598_122756751_122777129_122778059_122778462
ES.3922.1	chr10	-	7944	1	Intergenic	novelGene_3021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACACACAGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	122527606	122519662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_122519700_122527600
ES.3923.1	chr10	-	3289	1	Intergenic	novelGene_3023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	122763761	122760472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_122760500_122763800
ES.3924.1	chr10	-	2699	1	Antisense	novelGene_ENSMUSG00000034613.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCTGCCTCACACCA	NA	False	NA	NA	False	NA	NA	NA	122780567	122777868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_122777900_122780600
ES.3925.1	chr10	+	225	1	Intergenic	novelGene_3024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGATACTTTGACAAGT	NA	False	NA	NA	False	NA	NA	NA	122782688	122782913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122782700_122782900
ES.3926.1	chr10	-	158	1	Intergenic	novelGene_3025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCAATA	NA	False	NA	NA	False	NA	NA	NA	122790085	122789927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_122789900_122790100
ES.3927.1	chr10	+	136	1	Intergenic	novelGene_3026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122817755	122817891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122817800_122817900
ES.3928.1	chr10	-	719	1	FSM	ENSMUSG00000112237.2	ENSMUST00000220378.2	758	1	38	1	38	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTGTTTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	122821698	122820979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122821000_122821700
ES.3929.1	chr10	-	2808	3	Intergenic	novelGene_3027	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATTGCAACCGAAGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	122825767	122822855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_122823410_122823451_122825448_122825509
ES.393.1	chr1	+	204	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTATCTAATTTTG	NA	False	NA	NA	False	NA	NA	NA	44093471	44093675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_44093500_44093700
ES.3930.1	chr10	-	9156	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-354	-3291	4	2	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGAGTGGTGCTTTTATTC	NA	False	NA	NA	False	ATTAAA	-20	NA	122912284	122827962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.11	chr10	-	6064	34	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	5	88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	30.067539522981	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTACTTCTGATTTGC	NA	False	NA	-9	True	AATACA	-15	NA	122912283	122830975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882255_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.13	chr10	-	5741	31	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	7	87	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	37.1812975686553	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTACTTCTGATTTG	NA	False	NA	-10	True	AATACA	-14	NA	122912281	122830976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866195_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.14	chr10	-	6485	35	NNC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	13	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	36.8943713414147	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTACTTCTGATTTG	NA	False	NA	-10	True	AATACA	-14	NA	122912275	122830976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122894077_122894430_122895092_122895157_122911756
ES.3930.16	chr10	-	6064	33	NNC	ENSMUSG00000034602.16	novel	5302	34	NA	NA	-22	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.4037469466737	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTACTTCTGATTTG	NA	False	NA	-10	True	AATACA	-14	NA	122912310	122830976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866195_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.17	chr10	-	6169	34	NNC	ENSMUSG00000034602.16	novel	5302	34	NA	NA	-6	87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	33.519781586039	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTACTTCTGATTTG	NA	False	NA	-10	True	AATACA	-14	NA	122912294	122830976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845551_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.18	chr10	-	6071	33	NIC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	10	86	combination_of_known_splicesites	FALSE	canonical	0	0	junction_32	30.5316818034972	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTCTACTTCTGATTT	NA	False	NA	-11	True	AATACA	-13	NA	122912278	122830977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122911756
ES.3930.19	chr10	-	6997	33	NIC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	9	85	intron_retention	FALSE	canonical	3	100	junction_21	19.4051177205911	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTCTACTTCTGATT	NA	False	NA	-12	True	AATACA	-12	NA	122912279	122830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.2	chr10	-	9055	35	NNC	ENSMUSG00000034602.16	novel	5302	34	NA	NA	-2	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	33.1077720101194	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGAGTGGTGCTTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	122912290	122827965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122828319_122828425_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.21	chr10	-	8017	32	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	0	85	intron_retention	FALSE	canonical	0	0	junction_8	30.3876789205247	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTCTACTTCTGATT	NA	False	NA	-12	True	AATACA	-12	NA	122912288	122830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122846543_122849272_122849896_122850843_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.22	chr10	-	5874	33	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	9	85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.9543761149769	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTCTACTTCTGATT	NA	False	NA	-12	True	AATACA	-12	NA	122912279	122830978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854058_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.23	chr10	-	5819	19	ISM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	46906	-269	1200	79	3prime_fragment	FALSE	canonical	3	105	junction_6	18.1642879856242	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTACGTTTCTACTT	NA	False	NA	-18	True	AATACA	-6	NA	122865024	122830984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813
ES.3930.24	chr10	-	5884	32	NIC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	10	48	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	30.8790396296506	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGCTGTATTTATTATT	NA	False	NA	-49	True	TTTAAA	-29	NA	122912278	122831015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.25	chr10	-	6160	35	NNC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	36.7939648278201	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCATTTATTTAAAAT	NA	False	NA	-95	True	AATAAA	-21	NA	122912281	122831061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122894709_122894816_122895092_122895157_122911756
ES.3930.27	chr10	-	6023	34	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	30.067539522981	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCATTTATTTAAAAT	NA	False	NA	-95	True	AATAAA	-21	NA	122912320	122831061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882263_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.28	chr10	-	7014	33	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	7	2	intron_retention	FALSE	canonical	2	14	junction_20	28.6286672050499	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCATTTATTTAAAAT	NA	False	NA	-95	True	AATAAA	-21	NA	122912281	122831061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866195_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.29	chr10	-	6249	35	NNC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_33	36.4933633820487	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGCATTTATTTAAAAT	NA	False	NA	-95	True	AATAAA	-21	NA	122912284	122831061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122894623_122894816_122895092_122895157_122911756
ES.3930.30	chr10	-	5989	34	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	30.1149618538092	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTGCATTTATTTAA	NA	False	NA	-98	True	AATAAA	-18	NA	122912278	122831064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862017_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.31	chr10	-	960	4	NNC	ENSMUSG00000034602.16	novel	3978	23	NA	NA	-6265	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	68.1778719396713	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGCATTTATTTA	NA	False	NA	-99	True	AATAAA	-17	NA	122841977	122831065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838744_122841916
ES.3930.32	chr10	-	2061	9	NNC	ENSMUSG00000034602.16	novel	3978	23	NA	NA	-394	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	45.0242989950982	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGTTGCATTTATTTA	7689	False	NA	-99	True	AATAAA	-17	NA	122849730	122831065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846408_122846543_122849272
ES.3930.33	chr10	-	6051	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	-185	3	-5	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAACAGTTGCATTTAT	NA	False	NA	-102	True	AATAAA	-14	NA	122912285	122831068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.34	chr10	-	5909	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-369	-29	-11	29	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGAGGCTGGTGTTTT	NA	False	NA	-6	True	AAAAAG	-24	NA	122912299	122831224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.37	chr10	-	6038	21	NIC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	387	27	intron_retention	FALSE	canonical	3	100	junction_20	19.909482665303	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTGAGGCTGGTGTT	NA	False	NA	-8	True	AAAAAG	-22	NA	122868649	122831226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122844232_122845407_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427
ES.3930.38	chr10	-	5832	34	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	18	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	30.003152573871	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTGTGTATGTGTTAA	NA	False	NA	-68	True	NA	NA	NA	122912270	122831286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845551_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.39	chr10	-	5692	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-355	174	3	1	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAGCCTCCATGTTA	NA	False	NA	NA	False	ATTAAA	-27	NA	122912285	122831427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.4	chr10	-	7241	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-1585	4	1183	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGAAAATATTGCCAT	NA	False	NA	NA	False	GATAAA	-25	NA	122912284	122829880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.41	chr10	-	5167	29	ISM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-360	12530	-2	2058	5prime_fragment	FALSE	canonical	3	100	junction_17	20.383691960957	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTAGGCATATGTA	NA	False	NA	NA	False	AATAAA	-18	NA	122912290	122843783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.42	chr10	-	4829	26	ISM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-349	17625	9	351	5prime_fragment	FALSE	canonical	3	100	junction_14	19.6336038464669	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAATGCCTTCATGGGCT	NA	False	NA	NA	False	NA	NA	NA	122912279	122848878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.43	chr10	-	4097	27	NNC	ENSMUSG00000034602.16	novel	5302	34	NA	NA	3	-497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	43.6463056855904	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCCGTCCTTCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	122912285	122849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122879882_122879990_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.44	chr10	-	3996	26	ISM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-361	18261	-3	-497	5prime_fragment	FALSE	canonical	3	39	junction_14	26.6219758845958	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCCGTCCTTCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	122912291	122849726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.45	chr10	-	5279	2	NIC	ENSMUSG00000034602.16	novel	882	3	NA	NA	-129	19	intron_retention	FALSE	canonical	3	147	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATGTATGAATCTAGA	NA	False	NA	NA	False	NA	NA	NA	122866353	122860653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122862393_122862813
ES.3930.46	chr10	-	6333	1	NIC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	-16	19	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATGTATGAATCTAGA	NA	False	NA	NA	False	NA	NA	NA	122866986	122860653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122860700_122867000
ES.3930.47	chr10	-	4167	18	NIC	ENSMUSG00000034602.16	novel	5302	34	NA	NA	4	-3	intron_retention	FALSE	canonical	3	39	junction_6	29.1988765959183	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122912284	122860675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.48	chr10	-	9440	14	NIC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	7	-7	intron_retention	FALSE	canonical	3	100	junction_3	18.7884516967142	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	122912281	122860679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122862233_122862311_122862393_122862813_122867027_122868427_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.49	chr10	-	2353	8	NNC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	4	-5378	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	53.4919410294863	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATTAAGTACAGACTTA	NA	False	NA	NA	False	AATAAA	-15	NA	122912284	122876570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122877721_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.50	chr10	-	4381	1	NIC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	19337	-17020	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAACAGCTCAGAGGT	NA	False	NA	NA	False	AATAAA	-7	NA	122892593	122888212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122888200_122892600
ES.3930.6	chr10	-	7136	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-354	-1480	4	1078	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGACTCAAGCCGT	NA	False	NA	NA	False	AAAACA	-44	NA	122912284	122829985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.7	chr10	-	6480	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-354	-615	4	425	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTGAGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	122912284	122830638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.8	chr10	-	6196	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	-399	-286	-41	96	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGATTTGCCTTCTTGT	NA	False	NA	-1	True	AATACA	-23	NA	122912329	122830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3930.9	chr10	-	6195	34	NNC	ENSMUSG00000034602.16	novel	5511	34	NA	NA	3	96	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	35.8947292595084	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGATTTGCCTTCTTGT	NA	False	NA	-1	True	AATACA	-23	NA	122912285	122830967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841868_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866195_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ES.3931.1	chr10	+	177	1	Intergenic	novelGene_3028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	122925194	122925371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_122925200_122925400
ES.3932.1	chr10	+	1563	4	Antisense	novelGene_ENSMUSG00000020124.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAGGTACCAAACA	NA	False	NA	NA	False	NA	NA	NA	122982821	123008337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_122982844_122999497_122999558_123004129_123004278_123007004
ES.3932.2	chr10	+	2535	3	Antisense	novelGene_ENSMUSG00000020124.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGTACCAAACATTACTG	NA	False	NA	NA	False	NA	NA	NA	122998509	123008343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_122999558_123004129_123004278_123007004
ES.3932.3	chr10	+	7107	2	Antisense	novelGene_ENSMUSG00000020124.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGTACCAAACATTACTG	NA	False	NA	NA	False	NA	NA	NA	122998509	123008343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_123004278_123007004
ES.3932.4	chr10	+	6944	1	Antisense	novelGene_ENSMUSG00000020124.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGTACCAAACATTACTG	NA	False	NA	NA	False	NA	NA	NA	123001399	123008343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_123001400_123008300
ES.3933.1	chr10	-	1756	1	Genic_Genomic	ENSMUSG00000020124.11	novel	NA	NA	NA	NA	13350	630	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	122942036	122940280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_122940300_122942000
ES.3933.10	chr10	-	4429	19	NIC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	4	1	combination_of_known_splicesites	FALSE	canonical	1	15	junction_14	131.042931896383	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032827	122947639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.11	chr10	-	4843	22	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.556498512471	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032875	122947639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949665_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.14	chr10	-	4592	20	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	172.156551186249	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032845	122947640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_123004131_123004278_123007004_123007133_123011747_123011879_123017577_123017706_123032731
ES.3933.17	chr10	-	4615	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.315528363756	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGTCTTTTATTTCTT	NA	False	NA	-2	True	AATAAA	-15	NA	123032837	122947641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963935_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.18	chr10	-	5356	24	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	209.174143493497	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGTCTTTTATTTCTT	NA	False	NA	-2	True	AATAAA	-15	NA	123032826	122947641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122986866_122987031_122988945_122989033_122994767_122995240_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.2	chr10	-	9600	8	ISM	ENSMUSG00000020124.11	ENSMUST00000219937.2	1587	9	1957	-8220	1957	-2	3prime_fragment	FALSE	canonical	3	491	junction_7	51.7698990628685	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTATATCTGTACATT	NA	False	NA	NA	False	AATAAA	-27	NA	122961833	122940912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716
ES.3933.23	chr10	-	4527	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	54	6944	0	-214	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTTAGGTATCGATTC	NA	False	NA	NA	False	ATTAAA	-29	NA	123032846	122947854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.24	chr10	-	4427	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	11	7087	11	-357	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGTAAATTATTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	123032889	122947997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.25	chr10	-	4367	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-59	358	-17	-358	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGGTAAATTATTTA	NA	False	NA	NA	False	AATAAA	-19	NA	123032917	122947998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.26	chr10	-	3665	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	29	972	2	520	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTTTGGTAATTTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	123032829	122948612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.27	chr10	-	3774	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	43	7708	1	514	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTACTCCATTTTGGTA	NA	False	NA	NA	False	ATTAAA	-15	NA	123032857	122948618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.28	chr10	-	3478	23	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	5	103	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	168.092758975022	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGAACTTAGTTCTTGG	NA	False	NA	NA	False	AAGAAA	-5	NA	123032826	122949029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122986866_122987013_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.3	chr10	-	7574	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	7	-2915	-5	2915	multi-exon	TRUE	canonical	3	255	junction_15	80.7788802843912	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATAAAGGAAAAAAAA	NA	False	NA	NA	False	GATAAA	-39	NA	123032851	122944725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.30	chr10	-	3334	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	69	8122	0	100	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGCTGAACTTAGTTCT	NA	False	NA	NA	False	AAGAAA	-2	NA	123032831	122949032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.31	chr10	-	3332	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-64	1398	-22	94	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCATGGCTGAACTT	NA	False	NA	96	True	NA	NA	NA	123032922	122949038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.32	chr10	-	5538	20	NIC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	255	junction_14	78.6397515657049	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032848	122949132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.33	chr10	-	3220	21	NIC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_16	140.27651264556	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032879	122949132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.34	chr10	-	3305	23	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	171.488530566048	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032826	122949132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122993033_122993110_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.36	chr10	-	3280	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	21	8224	-8	-2	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTTCTTTAATTT	NA	False	NA	0	True	AATAAA	-30	NA	123032879	122949134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.37	chr10	-	3357	23	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	218.601438336931	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTATGTTTTCTTTAAT	NA	False	NA	-2	True	AATAAA	-28	NA	123032825	122949136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961592_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122995004_122995132_122999497_122999560_123004131_123004278_123007004_123007132_123011742_123011879_123017577_123017706_123032731
ES.3933.38	chr10	-	3407	23	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_16	167.447413726329	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTATGTTTTCTTTAA	NA	False	NA	-3	True	AATAAA	-27	NA	123032845	122949137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122986866_122987031_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.39	chr10	-	3302	23	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	171.361659019216	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTGATGAATTATGT	NA	False	NA	-12	True	AATAAA	-18	NA	123032846	122949146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122995172_122995240_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.4	chr10	-	5013	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	71	6441	2	289	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCTTTCTGTTGTA	NA	False	NA	NA	False	NA	NA	NA	123032829	122947351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.40	chr10	-	3182	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-23	1507	-10	-15	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTTGATGAATTATG	NA	False	NA	-13	True	AATAAA	-17	NA	123032881	122949147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.41	chr10	-	3165	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-4	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	140.853780566941	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTTGATGAATTATG	NA	False	NA	-13	True	AATAAA	-17	NA	123032875	122949147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017695_123032731
ES.3933.43	chr10	-	3310	22	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	165.321880775167	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATGAATTAT	NA	False	NA	-14	True	AATAAA	-16	NA	123032846	122949148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122986866_122987031_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.44	chr10	-	3145	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	4	-16	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	139.246499058325	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATGAATTAT	NA	False	NA	-14	True	AATAAA	-16	NA	123032827	122949148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963982_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.45	chr10	-	6059	14	NIC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-856	-16	intron_retention	FALSE	canonical	3	429	junction_8	43.702869795957	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATGAATTAT	2392	False	NA	-14	True	AATAAA	-16	NA	122984091	122949148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698
ES.3933.47	chr10	-	3102	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	5	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.359482745095	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTTTTGATGAATTAT	NA	False	NA	-14	True	AATAAA	-16	NA	123032826	122949148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955079_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.48	chr10	-	6841	16	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-8036	-17	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_15	138.962440968774	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATGAATTA	NA	False	NA	-15	True	AATAAA	-15	NA	122991271	122949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122986866
ES.3933.49	chr10	-	6013	20	NIC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	2	-17	intron_retention	FALSE	canonical	3	236	junction_13	104.272575891758	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATGAATTA	NA	False	NA	-15	True	AATAAA	-15	NA	123032829	122949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.5	chr10	-	4945	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	7	-286	-5	286	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCATTTGCTTTCTGTT	NA	False	NA	NA	False	TTTAAA	-44	NA	123032851	122947354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.50	chr10	-	5612	21	NIC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	6	-17	intron_retention	FALSE	canonical	3	236	junction_14	98.0423377934247	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATGAATTA	NA	False	NA	-15	True	AATAAA	-15	NA	123032852	122949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.52	chr10	-	2980	20	NIC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	3	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	144.45263963304	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTTTTGATGAATTA	NA	False	NA	-15	True	AATAAA	-15	NA	123032855	122949149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.53	chr10	-	3130	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	-7	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	139.090114673905	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTTTTGATGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	123032839	122949150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999553_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.54	chr10	-	3209	22	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	145.354941288269	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTTTTGATGAATT	NA	False	NA	-16	True	AATAAA	-14	NA	123032831	122949150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017584_123017706_123032731
ES.3933.55	chr10	-	2678	19	ISM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	31	9752	4	-2	5prime_fragment	FALSE	canonical	3	255	junction_13	78.9440534824943	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTTGCTTATAATCAT	NA	False	NA	NA	False	AATAAA	-9	NA	123032827	122957392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.56	chr10	-	2120	10	ISM	ENSMUSG00000020124.11	ENSMUST00000219992.2	2603	17	32	5931	-7	0	5prime_fragment	FALSE	canonical	3	255	junction_4	102.026140441229	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACTTGGTTCAGGAC	NA	False	NA	NA	False	AATAAA	-11	NA	123032839	122966130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.57	chr10	-	2012	10	ISM	ENSMUSG00000020124.11	ENSMUST00000219992.2	2603	17	-4	6075	-4	-144	5prime_fragment	FALSE	canonical	3	255	junction_4	102.026140441229	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTTATTGTTGTC	NA	False	NA	NA	False	AGTAAA	-18	NA	123032875	122966274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.6	chr10	-	4778	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	29	6718	0	12	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTACTCTGAAACCAC	NA	False	NA	11	True	AATAAA	-28	NA	123032871	122947628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.7	chr10	-	4733	22	NNC	ENSMUSG00000020124.11	novel	11525	22	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	180.336055658655	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032826	122947639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968862_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011734_123011879_123017577_123017706_123032731
ES.3933.8	chr10	-	4637	21	NNC	ENSMUSG00000020124.11	novel	4666	21	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.315528363756	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032830	122947639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963957_122964048_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3933.9	chr10	-	4701	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-34	-1	8	1	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTTTTATTTCTTAC	NA	False	NA	0	True	AATAAA	-17	NA	123032892	122947639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ES.3934.1	chr10	-	422	1	Antisense	novelGene_ENSMUSG00000044071.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	123100725	123100303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_123100300_123100700
ES.3935.1	chr10	-	177	1	Intergenic	novelGene_3029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAACAAGAACAAC	NA	False	NA	NA	False	NA	NA	NA	123320157	123319980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_123320000_123320200
ES.3936.1	chr10	+	1843	4	Antisense	novelGene_ENSMUSG00000112603.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTTCCTATCTAGTCAC	NA	False	NA	NA	False	NA	NA	NA	123660959	123753992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_123661043_123735624_123735730_123746191_123746365_123752510
ES.3937.1	chr10	+	161	1	Intergenic	novelGene_3030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124353653	124353814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_124353700_124353800
ES.3938.1	chr10	+	178	1	Intergenic	novelGene_3031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATGGTATG	NA	False	NA	NA	False	NA	NA	NA	124788234	124788412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_124788200_124788400
ES.3939.1	chr10	-	211	1	Intergenic	novelGene_3032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTTTAAAATAAGAATTG	NA	False	NA	NA	False	AATAAA	-42	NA	125636078	125635867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_125635900_125636100
ES.394.1	chr1	+	247	1	Antisense	novelGene_ENSMUSG00000026049.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44140903	44141150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_44140900_44141200
ES.3940.1	chr10	+	2039	2	Intergenic	novelGene_3033	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTTTGAATGCTTTA	NA	False	NA	NA	False	NA	NA	NA	125752525	125763986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_125752826_125762247
ES.3941.1	chr10	+	4135	18	NNC	ENSMUSG00000020105.10	novel	1554	3	NA	NA	-8579	0	intron_retention	FALSE	canonical	0	0	junction_1	23.7869726784253	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTACTGAAGTTTTTT	NA	False	NA	14	True	TATAAA	-16	NA	125793457	125851099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_125793504_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.10	chr10	+	4023	19	NNC	ENSMUSG00000020105.10	novel	4016	19	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.9789001899793	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTACTGAAGTTTTTT	NA	False	NA	14	True	TATAAA	-16	NA	125802084	125851099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848779_125849023_125849120_125849391_125850544
ES.3941.11	chr10	+	6019	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-31	-1972	3	1972	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTGTGTTCATGTATG	NA	False	NA	NA	False	NA	NA	NA	125802090	125853200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.12	chr10	+	6532	17	NIC	ENSMUSG00000020105.10	novel	4016	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	53	junction_3	13.9104277432436	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGAAGTTTTTTCAAT	NA	False	NA	18	True	TATAAA	-20	NA	125802091	125851103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125849023_125849120_125849391_125850544
ES.3941.2	chr10	+	4010	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-110	116	-25	9	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTCAATAACCCCGTC	NA	False	NA	27	True	TATAAA	-29	NA	125802011	125851112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.3	chr10	+	4085	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-68	-1	17	1	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTCTCCAATGCATTT	NA	False	NA	NA	False	AATAAA	-35	NA	125802053	125851229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.4	chr10	+	3849	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-60	227	25	-98	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAACTTTGTTTTA	NA	False	NA	-84	True	TATAAA	-19	NA	125802061	125851001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.5	chr10	+	5097	18	ISM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	-56	129	-22	0	intron_retention	FALSE	canonical	3	53	junction_3	15.7589980887506	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTACTGAAGTTTTTT	NA	False	NA	14	True	TATAAA	-16	NA	125802065	125851099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120
ES.3941.6	chr10	+	3785	19	NNC	ENSMUSG00000020105.10	novel	4016	19	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	22.9632691138492	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTACTGAAGTTTTT	NA	False	NA	13	True	TATAAA	-15	NA	125802066	125851098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845811_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ES.3941.7	chr10	+	3862	19	NNC	ENSMUSG00000020105.10	novel	4016	19	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	23.8011956334182	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGAAGTTTTTTCAAT	NA	False	NA	18	True	TATAAA	-20	NA	125802066	125851103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848962_125849023_125849120_125849391_125850544
ES.3941.9	chr10	+	3921	19	NNC	ENSMUSG00000020105.10	novel	4016	19	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	29.7601523293592	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTACTGAAGTTTTT	NA	False	NA	13	True	TATAAA	-15	NA	125802070	125851098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838972_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848891_125849023_125849120_125849391_125850544
ES.3942.1	chr10	-	5697	2	Antisense	novelGene_ENSMUSG00000020105.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125813490	125807593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_125808062_125808261
ES.3942.2	chr10	-	1020	1	Antisense	novelGene_ENSMUSG00000020105.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAATTAGATCTGAAATCC	NA	False	NA	NA	False	TATAAA	-25	NA	125809250	125808230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_125808200_125809200
ES.3943.1	chr10	-	176	1	Intergenic	novelGene_3034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTCTTTTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	126220402	126220226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126220200_126220400
ES.3944.1	chr10	+	174	1	Intergenic	novelGene_3035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	126490064	126490238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126490100_126490200
ES.3945.1	chr10	+	326	1	Intergenic	novelGene_3036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTTTAAAAAGTACAAAG	NA	False	NA	NA	False	AATAAA	-6	NA	126633534	126633860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126633500_126633900
ES.3946.1	chr10	+	3417	1	Intergenic	novelGene_3037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCTTCTTGGTTATG	NA	False	NA	NA	False	NA	NA	NA	126683198	126686615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126683200_126686600
ES.3947.1	chr10	+	172	1	Intergenic	novelGene_3038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	126699583	126699755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126699600_126699800
ES.3948.1	chr10	+	180	1	Intergenic	novelGene_3039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGCTGAACAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	126702739	126702919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126702700_126702900
ES.3949.1	chr10	+	161	1	Intergenic	novelGene_3040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	126712005	126712166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126712000_126712200
ES.395.1	chr1	-	1296	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	-32	1	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141633	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
ES.395.10	chr1	-	4792	4	ISM	ENSMUSG00000026049.12	ENSMUST00000152239.8	1046	6	6224	-249	4547	-2	3prime_fragment	FALSE	canonical	3	402	junction_1	9.2736184954957	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATGGTGCCTTTGTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	44134608	44125777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520
ES.395.11	chr1	-	1068	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	-32	17	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGTATACCTCTCACT	NA	False	NA	NA	False	AATAAA	-19	NA	44141633	44126002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
ES.395.12	chr1	-	1113	8	NNC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	-4	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	186.936527479576	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGATAAAGTATACCTC	NA	False	NA	NA	False	AATAAA	-14	NA	44141578	44126007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140732_44141059_44141118_44141487
ES.395.13	chr1	-	1006	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	-53	7	-53	-1	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAAGTACGGTTGGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	44141654	44126027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ES.395.2	chr1	-	1203	7	NNC	ENSMUSG00000026049.12	novel	935	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.397273119789	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141597	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44140958_44141026_44141487
ES.395.3	chr1	-	1204	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	2	-246	-1	1	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141599	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ES.395.4	chr1	-	1122	6	NIC	ENSMUSG00000026049.12	novel	935	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	156.042814637522	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141583	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141487
ES.395.5	chr1	-	4106	3	ISM	ENSMUSG00000026049.12	ENSMUST00000152239.8	1046	6	9746	-252	8069	1	intron_retention	FALSE	canonical	3	402	junction_1	10.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44131086	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_44126224_44127002_44127209_44127635
ES.395.6	chr1	-	1190	7	FSM	ENSMUSG00000026049.12	ENSMUST00000133677.8	935	7	-10	-245	0	1	multi-exon	FALSE	canonical	3	15	junction_5	163.292596960861	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141593	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141059_44141118_44141487
ES.395.7	chr1	-	3513	5	ISM	ENSMUSG00000026049.12	ENSMUST00000156392.8	1122	6	16	-1	1	1	intron_retention	FALSE	canonical	3	402	junction_1	13.1339255365637	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44141582	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007
ES.395.8	chr1	-	3675	5	NNC	ENSMUSG00000026049.12	novel	1122	6	NA	NA	5591	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	177.71676904558	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTTTGTTTTACT	NA	False	NA	-2	True	ATTAAA	-18	NA	44133564	44125774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44132395_44132470
ES.395.9	chr1	-	971	5	NIC	ENSMUSG00000026049.12	novel	960	6	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	165.394981786026	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTGCCTTTGTTTTA	NA	False	NA	-4	True	ATTAAA	-16	NA	44141599	44125776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44139007_44139162_44141487
ES.3950.1	chr10	-	1557	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	-57	-597	-57	597	multi-exon	FALSE	canonical	3	15	junction_1	67.2767418949521	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCGAGTCTATCTTGTT	NA	False	NA	NA	False	NA	NA	NA	126737281	126703698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.2	chr10	-	4121	6	NNC	ENSMUSG00000025436.13	novel	3461	6	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.8477865140733	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737248	126723116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126726610_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.3	chr10	-	1088	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	-44	-1	-37	1	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	False	NA	1	True	AATAAA	-26	NA	126737261	126723116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.4	chr10	-	4036	6	NNC	ENSMUSG00000025436.13	novel	1043	6	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	73.2458872565552	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126737199	126723117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126725475_126726408_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.5	chr10	-	4152	6	FSM	ENSMUSG00000025436.13	ENSMUST00000220051.2	3461	6	30	-721	28	0	multi-exon	FALSE	canonical	2	2	junction_1	72.4497066936782	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126737189	126723117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126726701_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.6	chr10	-	3281	7	NNC	ENSMUSG00000025436.13	novel	3461	6	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.690171872599	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTATTTTTTGGCTCT	NA	False	NA	-1	True	AATAAA	-24	NA	126737252	126723118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126725469_126726401_126726701_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.7	chr10	-	3292	7	NNC	ENSMUSG00000025436.13	novel	3461	6	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.1062188755762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTATACTTATTTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	126737196	126723123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126725469_126726401_126726701_126727508_126727665_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3950.8	chr10	-	3329	6	NNC	ENSMUSG00000025436.13	novel	3461	6	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.8477865140733	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTATGACTTATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	126737176	126723836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126726610_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ES.3951.1	chr10	+	166	1	Intergenic	novelGene_3041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAAGGGGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	126737541	126737707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126737500_126737700
ES.3952.1	chr10	-	153	1	Intergenic	novelGene_3042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	126757737	126757584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126757600_126757700
ES.3953.1	chr10	+	191	1	Intergenic	novelGene_3043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAGAGTAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	126758914	126759105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126758900_126759100
ES.3954.1	chr10	-	2966	2	Intergenic	novelGene_3044	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126771765	126768245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126771150_126771703
ES.3954.2	chr10	-	1351	1	Intergenic	novelGene_3045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTTCAAGTGCCAGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	126770783	126769432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126769400_126770800
ES.3955.1	chr10	-	241	1	Intergenic	novelGene_3046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTATTTACTTATTTT	NA	False	NA	NA	False	AAAAAG	-30	NA	126790142	126789901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126789900_126790100
ES.3956.1	chr10	+	5348	9	Fusion	ENSMUSG00000078429.10_ENSMUSG00000112035.2	novel	4817	8	NA	NA	-56	0	multi-exon	FALSE	canonical	0	0	junction_1	131.579764306674	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGAGCTGCTTTTGCTT	NA	False	NA	19	True	AATAAA	-25	NA	126793835	126835844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_126794015_126814239_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.10	chr10	+	4591	7	NIC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-121	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	145.371554607113	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGGAGCTGCTTTTGC	NA	False	NA	17	True	AATAAA	-23	NA	126814776	126835842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126815171_126827399_126827546_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.12	chr10	+	4452	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-91	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	131.579764306674	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACTGGGAGCTGCTTT	NA	False	NA	14	True	AATAAA	-20	NA	126814806	126835839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835202_126835346
ES.3956.14	chr10	+	4441	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-84	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	131.579764306674	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCAGGACTGGGAGCT	NA	False	NA	9	True	AATAAA	-15	NA	126814813	126835834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835221_126835364
ES.3956.15	chr10	+	1387	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	233	3197	-79	210	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTTGTCTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	126814818	126832641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.16	chr10	+	4442	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.579764306674	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814818	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835216_126835357
ES.3956.17	chr10	+	4573	8	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	140.229112817677	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814823	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827405_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.19	chr10	+	2183	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	242	2392	-70	1015	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGCCTCCTGCTTCTCG	NA	False	NA	NA	False	NA	NA	NA	126814827	126833446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.2	chr10	+	4704	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	131.579764306674	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGAGCTGCTTTTGCTT	NA	False	NA	19	True	AATAAA	-25	NA	126814563	126835844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835238_126835378
ES.3956.20	chr10	+	4549	10	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.036896081379	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGACTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	126814827	126835836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126819403_126819521_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835238_126835378
ES.3956.21	chr10	+	4419	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	160.7667176377	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGACTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	126814827	126835836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832068_126832229_126835238_126835378
ES.3956.22	chr10	+	1452	7	NIC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-66	210	intron_retention	FALSE	canonical	3	267	junction_2	51.5482513982989	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTTGTCTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	126814831	126832641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126832081_126832229
ES.3956.23	chr10	+	4512	7	NIC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-66	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	145.912835472263	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGACTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	126814831	126835836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126831723_126831817_126831894_126832081_126832229
ES.3956.24	chr10	+	4419	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	138.428456250873	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814836	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829772_126831723_126831817_126831894_126832081_126832229_126835253_126835393
ES.3956.25	chr10	+	1860	7	NIC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-60	741	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	145.371554607113	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGCAAGATGTCTGTCT	NA	False	NA	-5	True	AAGAAA	-11	NA	126814837	126833172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126815171_126827399_126827546_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.27	chr10	+	4370	8	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	146.129939381612	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGACTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	126814850	126835836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835253_126835393
ES.3956.28	chr10	+	4242	10	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	159.425202090913	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGACTGGGAGCTGC	NA	False	NA	11	True	AATAAA	-17	NA	126814870	126835836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126833631_126833777_126835238_126835378
ES.3956.29	chr10	+	3898	12	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	167.279298289907	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814884	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126833631_126833777_126834600_126834674_126834715_126834971_126835253_126835393
ES.3956.3	chr10	+	4690	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-13	1	at_least_one_novel_splicesite	TRUE	canonical	3	168	junction_8	83.7734109070414	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACTGGGAGCTGCTTT	NA	False	NA	14	True	AATAAA	-20	NA	126814572	126835839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835253_126835393
ES.3956.4	chr10	+	4650	8	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	177.489522542163	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACTGGGAGCTGCTTT	NA	False	NA	14	True	AATAAA	-20	NA	126814573	126835839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835238_126835378
ES.3956.5	chr10	+	2131	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	27	2659	27	748	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGTCTGTCTCCTTGCG	NA	False	NA	2	True	AAGAAA	-18	NA	126814612	126833179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.6	chr10	+	4571	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	42	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.579764306674	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACTGGGAGCTGCTTTT	NA	False	NA	15	True	AATAAA	-21	NA	126814627	126835840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126814724_126814929_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.7	chr10	+	4937	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	168.353747730783	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814658	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126815171_126827399_126827546_126827822_126828016_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ES.3956.8	chr10	+	4380	10	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	104	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	159.425202090913	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGACTGGGAGCTGCTTT	NA	False	NA	14	True	AATAAA	-20	NA	126814689	126835839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126814899_126815091_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835238_126835378
ES.3956.9	chr10	+	4723	7	NIC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-140	0	intron_retention	FALSE	canonical	3	267	junction_2	51.5482513982989	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814757	126835838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126832081_126832229
ES.3957.1	chr10	-	493	2	Intergenic	novelGene_3047	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGTACAAACTGTGT	NA	False	NA	NA	False	NA	NA	NA	126814312	126810312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126810705_126814211
ES.3958.1	chr10	-	2841	1	Antisense	novelGene_ENSMUSG00000078429.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAGAAAAGGCC	NA	False	NA	NA	False	NA	NA	NA	126828727	126825886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_126825900_126828700
ES.3959.1	chr10	+	196	1	Intergenic	novelGene_3048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	126850767	126850963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126850800_126851000
ES.396.1	chr1	+	3296	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	-25	5	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	19.4846093109408	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44158091	44183675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158356_44159333_44159435_44165502_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.10	chr1	+	3222	11	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	-42	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.4304595188327	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	21	True	AATAAA	-21	NA	44158625	44183677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44158737_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.11	chr1	+	3812	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	-491	249	-31	11	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTTTAATGTCTATGT	NA	False	NA	25	True	AATAAA	-25	NA	44158636	44183681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.12	chr1	+	4042	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	-470	-2	-10	2	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTGGTTCAGGCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	44158657	44183932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.13	chr1	+	4568	8	NIC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	57	4	intron_retention	FALSE	canonical	1	1	junction_1	19.9908142170654	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCTATGAATTTTAATG	NA	False	NA	18	True	AATAAA	-18	NA	44159195	44183674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44159435_44165502_44166027_44166797_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.14	chr1	+	3159	10	NIC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	66	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	17.7311889541676	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCCTATGAATTTTAAT	NA	False	NA	17	True	AATAAA	-17	NA	44159204	44183673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44159435_44165502_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.15	chr1	+	3197	10	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	104	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	16.9188331033865	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44159242	44183675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177735_44177820_44180937_44181035_44182008
ES.396.16	chr1	+	3211	10	NNC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	116	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	18.1889940945848	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCTATGAATTTTAATG	NA	False	NA	18	True	AATAAA	-18	NA	44159254	44183674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44181984
ES.396.17	chr1	+	5528	4	NIC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	8366	4	intron_retention	FALSE	canonical	3	59	junction_1	0.471404520791032	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCTATGAATTTTAATG	NA	False	NA	18	True	AATAAA	-18	NA	44167504	44183674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44168525_44168742_44168838_44176143_44177820_44180937
ES.396.18	chr1	+	3041	1	Genic_Genomic	ENSMUSG00000041684.12	novel	NA	NA	NA	NA	23012	1261	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAAGTTTGTTTTTGT	7470	False	NA	NA	False	NA	NA	NA	44182150	44185191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_44182200_44185200
ES.396.2	chr1	+	3528	11	FSM	ENSMUSG00000041684.12	ENSMUST00000035991.8	3313	11	-205	-10	0	10	multi-exon	FALSE	canonical	0	0	junction_1	17.2594901431068	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTTTAATGTCTATG	NA	False	NA	24	True	AATAAA	-24	NA	44158116	44183680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_44158531_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.3	chr1	+	3346	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	12.9479728143057	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44158118	44183675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158356_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.4	chr1	+	3575	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTGGTTCAGGCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	44158126	44183932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.5	chr1	+	3314	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	14	5	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44158130	44183675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.6	chr1	+	3232	10	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	15	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.0308377817314	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATGAATTTTAATGT	NA	False	NA	19	True	AATAAA	-19	NA	44158131	44183675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158356_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.7	chr1	+	4622	11	NIC	ENSMUSG00000041684.12	novel	3313	11	NA	NA	-5	1077	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.7317151150175	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGATCTCTATGCCATC	NA	False	NA	NA	False	NA	NA	NA	44158154	44185007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158336_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.396.9	chr1	+	3440	11	NIC	ENSMUSG00000041684.12	novel	3570	10	NA	NA	-107	7	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	15.8820653568735	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGAATTTTAATGTCT	NA	False	NA	21	True	AATAAA	-21	NA	44158560	44183677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44158890_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ES.3960.1	chr10	+	187	1	Intergenic	novelGene_3049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAAAAATATCTA	NA	False	NA	NA	False	NA	NA	NA	126857084	126857271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126857100_126857300
ES.3961.1	chr10	+	886	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	-8	913	-8	-163	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	126877792	126881321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.10	chr10	+	1600	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	167.502798484085	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877826	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.11	chr10	+	3314	3	NIC	ENSMUSG00000006732.15	novel	1044	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	356	junction_2	38.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877826	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126880521_126880624
ES.3961.12	chr10	+	2075	1	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	30	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGCAAGCTACGT	NA	False	NA	NA	False	NA	NA	NA	126877826	126879901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877800_126879900
ES.3961.13	chr10	+	1383	7	NNC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	132764	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	150.543090914934	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGCCCCTTCCTCACG	NA	False	NA	NA	False	NA	NA	NA	126877826	127014998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147_126881818_127014963
ES.3961.14	chr10	+	3996	4	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	-1	intron_retention	FALSE	canonical	3	356	junction_1	29.4089933334837	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877826	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.15	chr10	+	2246	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	5	-7	intron_retention	FALSE	canonical	3	356	junction_2	31.2119768678628	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	126877831	126881477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.16	chr10	+	2039	7	NNC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	5	1133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	150.543090914934	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	126877831	126883367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147_126882379_126883232
ES.3961.17	chr10	+	4245	2	NIC	ENSMUSG00000006732.15	novel	1089	5	NA	NA	5	-2	intron_retention	FALSE	canonical	3	390	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGAGTGTTTGCC	NA	False	NA	11	True	TTTAAA	-16	NA	126877831	126882232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126880739_126880894
ES.3961.18	chr10	+	4146	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	9	1147	intron_retention	FALSE	canonical	3	356	junction_2	31.2119768678628	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATTGTGCATATAAAC	NA	False	NA	NA	False	NA	NA	NA	126877835	126883381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.19	chr10	+	1857	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	10	-2	intron_retention	FALSE	canonical	3	381	junction_2	22.792542640083	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGAGTGTTTGCC	NA	False	NA	11	True	TTTAAA	-16	NA	126877836	126882232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126879093_126880335_126880739_126880894_126880997_126881147
ES.3961.2	chr10	+	1386	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	-8	413	-8	53	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTGTGGCTCAGGT	NA	False	NA	4	True	NA	NA	NA	126877792	126881821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.20	chr10	+	2724	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	10	1133	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	167.502798484085	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	126877836	126883367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.21	chr10	+	1776	6	FSM	ENSMUSG00000006732.15	ENSMUST00000120542.8	1044	6	17	-749	-8	-1	multi-exon	FALSE	canonical	3	10	junction_4	158.453273869617	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877843	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880865_126880997_126881147
ES.3961.22	chr10	+	4228	4	NIC	ENSMUSG00000006732.15	novel	1089	5	NA	NA	-8	1133	intron_retention	FALSE	canonical	3	390	junction_2	19.2006944318862	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	126877843	126883367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126880739_126880894_126880997_126881147
ES.3961.23	chr10	+	4129	3	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	356	junction_1	17	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTGAGTGTTTGCC	NA	False	NA	11	True	TTTAAA	-16	NA	126877843	126882232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126880521_126880624_126880739_126880894
ES.3961.24	chr10	+	3563	4	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	-5	52	intron_retention	FALSE	canonical	3	356	junction_1	29.4089933334837	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877846	126881820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.25	chr10	+	2180	3	ISM	ENSMUSG00000006732.15	ENSMUST00000139486.2	1089	5	1482	-52	1482	52	3prime_fragment	FALSE	canonical	3	390	junction_1	19	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126879333	126881820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126880739_126880894_126880997_126881147
ES.3961.26	chr10	+	2554	4	ISM	ENSMUSG00000006732.15	ENSMUST00000120542.8	1044	6	2619	-1897	2594	1147	3prime_fragment	FALSE	canonical	3	10	junction_2	182.45973680666	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATTGTGCATATAAAC	NA	False	NA	NA	False	NA	NA	NA	126880445	126883381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126880521_126880624_126880739_126880865_126880997_126881147
ES.3961.27	chr10	+	2181	8	ISM	ENSMUSG00000006724.13	ENSMUST00000172069.2	2443	9	821	4	400	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	1.49829835452879	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACGTCTTAAAATGTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	126884939	126888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126885125_126885548_126885752_126885837_126886039_126886110_126886284_126886546_126886717_126886918_126886998_126887381_126887580_126887899
ES.3961.28	chr10	+	2067	8	NNC	ENSMUSG00000006724.13	novel	2443	9	NA	NA	539	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.49829835452879	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACGTCTTAAAATGTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	126885078	126888871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126885125_126885548_126885752_126885837_126886039_126886085_126886284_126886546_126886717_126886918_126886998_126887381_126887580_126887899
ES.3961.29	chr10	+	1233	8	NNC	ENSMUSG00000006728.13	novel	1182	6	NA	NA	-4212	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1927.33048964793	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTAATGTTTTTT	NA	False	NA	28	True	AAAACA	-26	NA	126895190	126903165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126895221_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.3	chr10	+	2936	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	5	-1150	5	1150	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTGCATATAAACAGT	NA	False	NA	NA	False	NA	NA	NA	126877805	126883384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.30	chr10	+	1487	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	-48	614	-48	9	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTTCCAATTGGCT	NA	False	NA	38	True	AAAACA	-36	NA	126899354	126903175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.32	chr10	+	1474	8	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	-29	-3	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	1905.46497619615	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTCTTTAATGTTTT	NA	False	NA	26	True	AAAACA	-24	NA	126899373	126903163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900070_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.33	chr10	+	2132	7	FSM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	-105	11	-25	-11	multi-exon	FALSE	canonical	3	4641	junction_3	424.742274797318	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTATTTTTCTTT	NA	False	NA	18	True	AAAACA	-16	NA	126899377	126903155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ES.3961.34	chr10	+	2568	6	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-22	30	intron_retention	FALSE	canonical	3	4641	junction_2	452.974436364791	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899380	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ES.3961.39	chr10	+	2655	5	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	1	-19	intron_retention	FALSE	canonical	3	4641	junction_2	501.23198221981	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGTATGGTCTTTAT	NA	False	NA	10	True	AAAACA	-8	NA	126899403	126903147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126902106_126902797
ES.3961.4	chr10	+	2873	7	NNC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	9	1133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	150.543090914934	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGCAAA	NA	False	NA	NA	False	NA	NA	NA	126877809	126883367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147_126883034_126883075
ES.3961.40	chr10	+	1285	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	12	756	12	-71	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGTTCACCCCCATTAC	NA	False	NA	-48	True	NA	NA	NA	126899414	126903033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.41	chr10	+	1598	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	21	434	21	189	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCACTGGTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	126899423	126903355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.42	chr10	+	2678	5	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	21	-10	intron_retention	FALSE	canonical	3	4641	junction_1	500.667804037767	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTTTATTTTTCTTTA	NA	False	NA	19	True	AAAACA	-17	NA	126899423	126903156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ES.3961.43	chr10	+	1137	7	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	27	30	combination_of_known_junctions	FALSE	canonical	3	131	junction_1	1988.62057858093	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899429	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.44	chr10	+	981	5	ISM	ENSMUSG00000006728.13	ENSMUST00000133115.8	950	7	-43	797	27	65	5prime_fragment	FALSE	canonical	3	64	junction_1	2335.69909234901	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGACTTGAAGCTCTTAA	NA	False	NA	17	True	NA	NA	NA	126899429	126901249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126899629_126900070_126900323_126900453_126900590_126900703_126900872_126901023
ES.3961.45	chr10	+	1408	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	28	-13	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	1949.60441827441	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGGTCTTTATTTTTCT	NA	False	NA	16	True	AAAACA	-14	NA	126899430	126903153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901950_126902106_126902797
ES.3961.46	chr10	+	1289	9	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	28	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1839.54632654359	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899430	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797_126903021_126903101
ES.3961.47	chr10	+	1244	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	29	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2444.50338013884	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899431	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126899945_126900055_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.48	chr10	+	1445	9	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	30	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2329.35467189949	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899432	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902456_126902534_126902797
ES.3961.49	chr10	+	2808	4	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-30	-14	intron_retention	FALSE	canonical	3	4641	junction_1	505.975186040668	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATGGTCTTTATTTTTC	NA	False	NA	15	True	AAAACA	-13	NA	126899441	126903152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126900590_126900703_126901873_126901969_126902106_126902797
ES.3961.5	chr10	+	3124	4	NIC	ENSMUSG00000006732.15	novel	1089	5	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	390	junction_2	19.2006944318862	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877813	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126877940_126878928_126880739_126880894_126880997_126881147
ES.3961.50	chr10	+	1930	5	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-29	-11	intron_retention	FALSE	canonical	3	131	junction_1	2357.74981444173	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTATTTTTCTTT	NA	False	NA	18	True	AAAACA	-16	NA	126899442	126903155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126902106_126902797
ES.3961.51	chr10	+	1427	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	1961.27581342516	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTAATGTTTTTT	NA	False	NA	28	True	AAAACA	-26	NA	126899442	126903165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901172_126901821_126901873_126901969_126902106_126902797
ES.3961.52	chr10	+	2080	7	NNC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-22	-10	intron_retention	FALSE	canonical	3	9	junction_5	2100.82756841732	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTTTATTTTTCTTTA	NA	False	NA	19	True	AAAACA	-17	NA	126899449	126903156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901950_126902106_126902797
ES.3961.53	chr10	+	935	5	ISM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	-32	1924	-21	58	5prime_fragment	FALSE	canonical	3	4641	junction_3	473.882105591676	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCGTATGGGACTTGAAG	NA	False	NA	10	True	NA	NA	NA	126899450	126901242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023
ES.3961.55	chr10	+	1007	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	-11	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2415.58090364219	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899460	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899484_126899582_126899629_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.57	chr10	+	1048	5	ISM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	-20	1799	-9	183	5prime_fragment	FALSE	canonical	3	4641	junction_3	473.882105591676	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCACACTCCGTCGGCC	NA	False	NA	135	True	AGTAAA	-17	NA	126899462	126901367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023
ES.3961.58	chr10	+	2453	7	NNC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-8	30	intron_retention	FALSE	canonical	0	0	junction_6	2058.28874445632	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899463	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902534_126902797
ES.3961.59	chr10	+	697	4	FSM	ENSMUSG00000006728.13	ENSMUST00000135179.8	574	4	-19	-104	-6	69	multi-exon	FALSE	canonical	3	131	junction_1	2458.18813130502	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGAAGCTCTTAACCTA	NA	False	NA	21	True	NA	NA	NA	126899465	126901253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023
ES.3961.6	chr10	+	1198	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	13	580	-12	-114	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAGGTCAAAGGACTGT	NA	False	NA	NA	False	AAGAAA	-16	NA	126877813	126881654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.61	chr10	+	972	7	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	-3	-96	combination_of_known_junctions	FALSE	canonical	3	131	junction_1	1988.62057858093	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACAAGTCCCCACCTC	NA	False	NA	-73	True	NA	NA	NA	126899468	126903008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.62	chr10	+	1781	6	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	1	30	intron_retention	FALSE	canonical	3	131	junction_1	2163.06195935299	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899473	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ES.3961.63	chr10	+	2045	4	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-2	30	intron_retention	FALSE	canonical	3	131	junction_1	2588.8808822003	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899475	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126901873_126901969_126902106_126902797
ES.3961.65	chr10	+	1952	5	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	-1	-10	intron_retention	FALSE	canonical	3	131	junction_1	2272.94181623727	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTTTATTTTTCTTTA	NA	False	NA	19	True	AAAACA	-17	NA	126899476	126903156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900453_126900590_126900703_126901873_126901969_126902106_126902797
ES.3961.67	chr10	+	1133	7	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	2556.10737580929	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTATGGTCTTTATTT	NA	False	NA	12	True	AAAACA	-10	NA	126899486	126903149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901172_126901821_126901873_126901969_126902106_126902797
ES.3961.68	chr10	+	1782	7	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	11	-15	intron_retention	FALSE	canonical	3	4641	junction_2	447.57792617599	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTATGGTCTTTATTTTT	NA	False	NA	14	True	AAAACA	-12	NA	126899495	126903151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.7	chr10	+	1779	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	13	-1	-12	1	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGAGTGTTTGCCTGC	NA	False	NA	14	True	TTTAAA	-19	NA	126877813	126882235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ES.3961.70	chr10	+	5154	8	FSM	ENSMUSG00000006728.13_ENSMUSG00000112639.2	ENSMUST00000006911.12	2053	8	101	-3202	19	21	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	1574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTTATGTGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	126899503	126906991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.72	chr10	+	1280	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	30	30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1912.89114447536	1565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899514	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902803
ES.3961.73	chr10	+	2071	6	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	47	30	intron_retention	FALSE	canonical	3	5326	junction_4	199.519021649566	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899531	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900088_126900323_126900453_126900872_126901023_126901873_126901969_126902106_126902797
ES.3961.75	chr10	+	1390	7	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	57	30	intron_retention	FALSE	canonical	3	4641	junction_2	459.636329673314	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126899541	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126899629_126900088_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ES.3961.76	chr10	+	1643	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	-25	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2394.46785021522	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTATGGTCTTTATTTTT	NA	False	NA	14	True	AAAACA	-12	NA	126899711	126903151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902456_126902534_126902797
ES.3961.77	chr10	+	2234	4	ISM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	1055	32	371	30	intron_retention	FALSE	canonical	3	4641	junction_1	491.533880374034	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGACAAGACAAAGA	NA	False	NA	-3	True	NA	NA	NA	126900537	126903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_126900590_126900703_126900872_126901023_126901873_126901969
ES.3961.78	chr10	+	385	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	-51	-5	-51	5	multi-exon	FALSE	canonical	3	25	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTTTAAATTTTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	126906298	126906975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126906494_126906785
ES.3961.79	chr10	+	200	1	Intergenic	novelGene_3052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATATTA	NA	False	NA	NA	False	NA	NA	NA	126909054	126909254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126909100_126909300
ES.3961.8	chr10	+	4110	3	NIC	ENSMUSG00000006732.15	novel	1089	5	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	390	junction_1	19	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGAGTGTTTGCCT	NA	False	NA	12	True	TTTAAA	-17	NA	126877816	126882233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_126880739_126880894_126880997_126881147
ES.3961.80	chr10	+	402	1	Intergenic	novelGene_3053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAGAGCCAA	NA	False	NA	NA	False	NA	NA	NA	126909055	126909457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126909100_126909500
ES.3961.81	chr10	+	4788	1	Antisense	novelGene_ENSMUSG00000040462.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTGCATTGTAATAATAA	3782	False	NA	NA	False	AATAAA	-20	NA	126932257	126937045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_126932300_126937000
ES.3961.82	chr10	+	177	1	Intergenic	novelGene_3054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	126946335	126946512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_126946300_126946500
ES.3961.83	chr10	+	2497	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-97	-5	-97	5	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCTCTGTGGTACT	257	False	NA	13	True	GGGGCT	-28	NA	127000996	127008204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ES.3961.84	chr10	+	2896	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	-69	-432	-69	432	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTCTACTGTAGTTG	285	False	NA	NA	False	NA	NA	NA	127001024	127008631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ES.3961.85	chr10	+	1700	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	-209	6	-56	-5	multi-exon	FALSE	canonical	3	48	junction_1	9.6	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATTTTCAATTTTTTT	298	False	NA	NA	False	ATTAAA	-18	NA	127001037	127004386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
ES.3961.87	chr10	+	2255	10	ISM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	623	1	-11	-1	3prime_fragment	FALSE	canonical	3	39	junction_5	12.6383699527165	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTACTTGTGTCTCTGT	977	False	NA	7	True	GGGGCT	-22	NA	127001716	127008198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ES.3961.88	chr10	+	4670	7	NIC	ENSMUSG00000006731.11	novel	2395	11	NA	NA	26	-2	intron_retention	FALSE	canonical	3	44	junction_6	11.6999525165228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTACTTGTGTCTCTG	1014	False	NA	6	True	GGGGCT	-21	NA	127001753	127008197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127006038_127006459_127006601_127006787
ES.3961.9	chr10	+	1381	6	FSM	ENSMUSG00000006732.15	ENSMUST00000120542.8	1044	6	-1	-336	0	52	multi-exon	FALSE	canonical	3	10	junction_4	158.453273869617	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877825	126881820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880865_126880997_126881147
ES.3962.1	chr10	-	5196	6	NNC	ENSMUSG00000040521.12	novel	655	4	NA	NA	0	4499	intron_retention	TRUE	canonical	0	0	junction_1	478.768670654211	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTGTCTGTGTTTTTGT	NA	False	NA	NA	False	AATAAA	-39	NA	126866672	126842941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126846522_126846602_126847733_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ES.3962.10	chr10	-	5461	5	NNC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-9	-14	intron_retention	TRUE	non_canonical	0	0	junction_2	412.681778129347	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGTATAGTGCTTAAT	NA	False	NA	-17	True	AATAAA	-10	NA	126866637	126858214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126858796_126860804_126861779_126861844_126865552_126866331_126866506_126866612
ES.3962.12	chr10	-	4410	6	NNC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-12	-46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	399.109308335448	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAAATGGTGATGTAAT	NA	False	NA	46	True	AATGAA	-22	NA	126866684	126858246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126858796_126860804_126861779_126861844_126864357_126865422_126865552_126866331_126866506_126866612
ES.3962.13	chr10	-	1273	7	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	1206	6	NA	NA	-358	3	multi-exon	FALSE	canonical	3	15	junction_6	461.08811522311	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTCAAATTTGTTTTTT	NA	False	NA	-21	True	TATAAA	-23	NA	126877740	126858313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877575
ES.3962.14	chr10	-	1090	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	3	113	3	3	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTCAAATTTGTTTTTT	NA	False	NA	-21	True	TATAAA	-23	NA	126866706	126858313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ES.3962.15	chr10	-	1240	6	NNC	ENSMUSG00000040521.12	novel	695	3	NA	NA	15	-1482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	478.768670654211	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTATTTTTTTAAAAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	126866694	126861585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126861779_126861844_126862384_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ES.3962.16	chr10	-	175	1	Intergenic	novelGene_3050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAATTATAAA	NA	False	NA	NA	False	NA	NA	NA	126865836	126865661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126865700_126865800
ES.3962.17	chr10	-	2213	5	NNC	ENSMUSG00000080115.4	novel	2719	3	NA	NA	-451	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTTGTGTTGTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	126877833	126866872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126866937_126866978_126868032_126868225_126869184_126876856_126876969_126877807
ES.3962.2	chr10	-	3164	8	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	655	4	NA	NA	63	2038	intron_retention	FALSE	canonical	0	0	junction_1	458.491581833565	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTGCAGGAACCTACT	NA	False	NA	NA	False	NA	NA	NA	126877319	126845402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126846522_126846602_126847729_126856504_126856653_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877086
ES.3962.3	chr10	-	1736	8	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	1206	6	NA	NA	18	3	multi-exon	FALSE	canonical	0	0	junction_6	439.652738661145	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGAGTGTGTGTGTG	NA	False	NA	0	True	AATAAA	-27	NA	126877364	126858197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612_126866847_126876856_126876969_126877086
ES.3962.4	chr10	-	1381	7	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	1206	6	NA	NA	-353	0	multi-exon	FALSE	canonical	3	15	junction_6	461.08811522311	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	False	NA	-3	True	AATAAA	-24	NA	126877735	126858200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877575
ES.3962.5	chr10	-	1495	7	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	1206	6	NA	NA	15	-7	multi-exon	FALSE	canonical	3	13	junction_6	461.563797203473	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGCTTAATGTGTGAG	NA	False	NA	-10	True	AATAAA	-17	NA	126877367	126858207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876856_126876969_126877086
ES.3962.6	chr10	-	1037	5	NIC	ENSMUSG00000040521.12	novel	1206	6	NA	NA	-2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	412.681778129347	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGCTTAATGTGTGAG	NA	False	NA	-10	True	AATAAA	-17	NA	126866670	126858207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126858796_126860804_126860893_126865422_126865552_126866331_126866506_126866612
ES.3962.7	chr10	-	1311	5	NNC	ENSMUSG00000040521.12	novel	833	5	NA	NA	-21	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	441.306228711991	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGTGCTTAATGT	NA	False	NA	-15	True	AATAAA	-12	NA	126866281	126858212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126865893
ES.3962.8	chr10	-	1450	7	Fusion	ENSMUSG00000040521.12_ENSMUSG00000080115.4	novel	1206	6	NA	NA	0	-12	multi-exon	FALSE	canonical	3	13	junction_6	464.342336596132	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGTGCTTAATGT	NA	False	NA	-15	True	AATAAA	-12	NA	126877382	126858212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126876911_126876969_126877086
ES.3963.1	chr10	-	2983	4	FSM	ENSMUSG00000040502.6	ENSMUST00000040307.6	3037	4	46	8	46	-8	multi-exon	TRUE	canonical	3	10	junction_3	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCAGACCCAGAGGGC	9965	False	NA	-7	True	ATTAAA	-20	NA	126896007	126890887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126892781_126893300_126893494_126894088_126894245_126895266
ES.3963.2	chr10	-	2037	4	FSM	ENSMUSG00000040502.6	ENSMUST00000040307.6	3037	4	-39	1039	-39	-1039	multi-exon	FALSE	canonical	3	10	junction_3	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGGCCTCCTTTCTCAT	9880	False	NA	-1	True	CATAAA	-17	NA	126896092	126891918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126892781_126893300_126893494_126894088_126894245_126895266
ES.3964.1	chr10	-	1619	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	-62	-1	-62	1	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTTTTCCTGTAT	NA	False	NA	1	True	AATAAA	-16	NA	126906195	126903147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ES.3964.12	chr10	-	2943	1	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2	-37	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906128	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126903200_126906100
ES.3964.13	chr10	-	1519	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	-775	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	238.187321241077	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAACATTAAAGAAAAA	NA	False	NA	-38	True	NA	NA	NA	126906908	126903186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126906757
ES.3964.14	chr10	-	1010	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	1	545	1	416	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCCTGGCCTTGCCAT	NA	False	NA	NA	False	NA	NA	NA	126906132	126903693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ES.3964.2	chr10	-	1538	6	NNC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	250.121090674097	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGTTTTCCTGT	NA	False	NA	-1	True	AATAAA	-14	NA	126906158	126903149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126904018_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ES.3964.3	chr10	-	1888	4	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2	-37	intron_retention	FALSE	canonical	3	586	junction_2	34.7211110933328	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906128	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904252_126904348_126904858_126905214_126905383_126905983
ES.3964.4	chr10	-	2342	2	FSM	ENSMUSG00000006736.10	ENSMUST00000220344.2	453	2	2	-1891	2	-37	multi-exon	FALSE	canonical	3	666	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906128	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126905383_126905983
ES.3964.5	chr10	-	1508	6	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	36	-37	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	238.187321241077	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	158	False	NA	-37	True	NA	NA	NA	126905814	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905675
ES.3964.6	chr10	-	2171	4	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	1	-37	intron_retention	FALSE	canonical	3	545	junction_1	49.4435705291059	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906132	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904060_126904137_126904252_126904348_126905383_126905983
ES.3964.7	chr10	-	1689	4	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2	-37	intron_retention	FALSE	canonical	3	586	junction_2	32.8261413442938	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906128	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904481_126904776_126904858_126905214_126905383_126905983
ES.3964.8	chr10	-	1871	5	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	2	-37	intron_retention	FALSE	canonical	3	545	junction_1	44.6227240315963	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906128	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126905383_126905983
ES.3964.9	chr10	-	2287	3	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	-37	-37	intron_retention	FALSE	canonical	3	601	junction_1	32.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACATTAAAGAAAAAT	NA	False	NA	-37	True	NA	NA	NA	126906170	126903185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126904252_126904348_126905383_126905983
ES.3965.1	chr10	-	183	1	Antisense	novelGene_ENSMUSG00000112639.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	126907186	126907003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_126907000_126907200
ES.3966.1	chr10	-	156	1	Intergenic	novelGene_3051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	126907836	126907680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_126907700_126907800
ES.3967.1	chr10	-	3719	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-12	-1080	-12	1078	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACTTTTGGCAAAATT	NA	False	NA	NA	False	AATACA	-16	NA	126957012	126930440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.10	chr10	-	2779	14	NIC	ENSMUSG00000040462.14	novel	2627	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	78	junction_3	50.4783039691077	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126956997	126931520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.13	chr10	-	4532	5	ISM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	0	19507	0	-17150	5prime_fragment	FALSE	canonical	3	202	junction_1	15.2479506819769	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACCTCTCAA	NA	False	NA	NA	False	NA	NA	NA	126957000	126951027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.2	chr10	-	2505	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	-43	-4	-37	4	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCTCTGTGGGGAGGGC	NA	False	NA	2	True	AATAAA	-20	NA	126957037	126931514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.3	chr10	-	2763	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	-134	-2	-134	0	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126957134	126931518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.4	chr10	-	2620	13	NIC	ENSMUSG00000040462.14	novel	2458	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	172	junction_8	23.0595545393998	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126957001	126931518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.5	chr10	-	2486	14	NNC	ENSMUSG00000040462.14	novel	2458	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.7012277738633	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126957001	126931518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935348_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3967.7	chr10	-	2641	13	NNC	ENSMUSG00000040462.14	novel	2627	15	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_6	61.3525785023652	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126956999	126931520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935425_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955537_126956237_126956415_126956825
ES.3967.8	chr10	-	2782	15	NNC	ENSMUSG00000040462.14	novel	2627	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	75.5076695658481	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126956999	126931520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126955638_126955960_126956237_126956415_126956825
ES.3967.9	chr10	-	2521	15	NNC	ENSMUSG00000040462.14	novel	2627	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	70.2317228747749	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126957002	126931520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936057_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ES.3968.1	chr10	-	1809	9	NNC	ENSMUSG00000040441.13	novel	3600	17	NA	NA	-29	125	intron_retention	FALSE	non_canonical	0	0	junction_4	3.73329613076702	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTACAGTCACAGTGCT	NA	False	NA	NA	False	AGTAAA	-33	NA	127012887	127008169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127008446_127009143_127009251_127009350_127009406_127009492_127009582_127009777_127010038_127010152_127010771_127010853_127010932_127012440_127012555_127012675
ES.3968.2	chr10	-	1788	15	NNC	ENSMUSG00000040441.13	novel	3130	18	NA	NA	1718	119	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.95446015304754	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCACAGAACTACAGTCAC	NA	False	NA	NA	False	AGTAAA	-27	NA	127014733	127008175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127008446_127009143_127009251_127009350_127009406_127009492_127009582_127009777_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597
ES.3968.3	chr10	-	1186	11	NIC	ENSMUSG00000040441.13	novel	3130	18	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	3.77359245282264	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTGGAGTGGGTC	NA	False	NA	NA	False	AATAAA	-18	NA	127012887	127008298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127008446_127009143_127009251_127009350_127009406_127009492_127009576_127009777_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675
ES.3968.4	chr10	-	1955	6	NIC	ENSMUSG00000040441.13	novel	3600	17	NA	NA	-66	-310	intron_retention	FALSE	canonical	1	1	junction_3	4.40908153700972	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAATAAATATTA	NA	False	NA	NA	False	NA	NA	NA	127011048	127008608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127009251_127009350_127009406_127009492_127009678_127009777_127010038_127010152_127010771_127010853
ES.3969.1	chr10	-	3068	14	NNC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-24	2	intron_retention	FALSE	canonical	0	0	junction_5	13.667219885854	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGTTGTCTTGGGAGG	6160	False	NA	-1	True	AATAAA	-18	NA	127024665	127018391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020335_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127023663
ES.3969.10	chr10	-	3758	12	ISM	ENSMUSG00000019467.16	ENSMUST00000219649.2	2571	14	1238	4	-26	0	3prime_fragment	FALSE	canonical	3	19	junction_9	8.86724868116112	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	6158	False	NA	-7	True	AATAAA	-12	NA	127024667	127018397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976
ES.3969.11	chr10	-	3962	10	NNC	ENSMUSG00000019467.16	novel	2218	16	NA	NA	228	0	intron_retention	FALSE	canonical	0	0	junction_4	9.9666109251507	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	6412	False	NA	-7	True	AATAAA	-12	NA	127024413	127018397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127019699_127019880_127020339_127020531_127020583_127020755_127020849_127020947_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976
ES.3969.12	chr10	-	4377	14	NIC	ENSMUSG00000019467.16	novel	2218	16	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_13	11.6578439449062	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	4952	False	NA	-7	True	AATAAA	-12	NA	127025873	127018397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127025479_127025847
ES.3969.13	chr10	-	3338	7	Fusion	ENSMUSG00000019467.16_ENSMUSG00000040415.16	novel	2218	16	NA	NA	-219	0	intron_retention	FALSE	canonical	0	0	junction_3	14.6030818665102	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	NA	False	NA	-7	True	AATAAA	-12	NA	127031816	127018397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_127019699_127019880_127020583_127020755_127021226_127021728_127022029_127022747_127022844_127022976_127023192_127031562
ES.3969.14	chr10	-	2267	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	-5	-268	-4	4	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGTCTTCTGTTCCTC	NA	False	NA	4	True	AATAAA	-29	NA	127031601	127026242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ES.3969.15	chr10	-	1906	5	NNC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.9366247839736	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031600	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127026909_127027204_127027423_127028477_127029227_127030263_127030504_127031562
ES.3969.16	chr10	-	2197	4	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	43.2691832858239	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031595	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127027423_127028477_127029227_127030263_127030504_127031562
ES.3969.17	chr10	-	986	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031588	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
ES.3969.18	chr10	-	956	5	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	57.6470944627741	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031588	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127026909_127029598_127029673_127030278_127030343_127030550_127030682_127031562
ES.3969.19	chr10	-	3321	4	ISM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	-5	-263	-4	-1	intron_retention	FALSE	canonical	3	105	junction_1	20.8859335970941	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031601	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278
ES.3969.2	chr10	-	2490	15	NNC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5564276663752	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	6192	False	NA	-3	True	AATAAA	-16	NA	127024633	127018393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020104_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.3969.20	chr10	-	1836	6	NNC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-218	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	52.9694251431899	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031815	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031745
ES.3969.21	chr10	-	2132	5	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	-218	-1	intron_retention	FALSE	canonical	1	3	junction_4	54.8833991294271	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031815	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031745
ES.3969.22	chr10	-	1904	7	NIC	ENSMUSG00000040415.16	novel	1925	6	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	53.9529115680207	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031588	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598_127029673_127030278_127030343_127030550_127030682_127031562
ES.3969.23	chr10	-	1858	7	NNC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	-199	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	53.5591573247128	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCACACCCGTCTTCTGT	NA	False	NA	-1	True	AATAAA	-24	NA	127031796	127026247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562_127031627_127031768
ES.3969.24	chr10	-	2202	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	-260	2	-241	-2	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031838	127026248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ES.3969.25	chr10	-	1190	4	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.2700213229091	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031595	127026248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127027141_127029632_127029673_127030278_127030504_127031562
ES.3969.26	chr10	-	2180	6	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_5	57.8639784321818	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031588	127026248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127030550_127030644_127031562
ES.3969.27	chr10	-	2615	4	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	5	-2	intron_retention	FALSE	canonical	3	65	junction_3	35.5559027760824	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031583	127026248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127027423_127028477_127029673_127030278_127030504_127031562
ES.3969.28	chr10	-	2225	6	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	15	junction_5	54.0244389142544	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTCTTCTG	NA	False	NA	-2	True	AATAAA	-23	NA	127031595	127026248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127030550_127030682_127031562
ES.3969.29	chr10	-	3069	5	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	62.6538107380549	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCACACCCGTCTTC	NA	False	NA	-4	True	AATAAA	-21	NA	127031588	127026250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127026388_127026458_127029227_127029598_127029673_127030278_127030343_127031562
ES.3969.3	chr10	-	3625	13	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-4	0	intron_retention	FALSE	canonical	3	19	junction_8	9.00925450115972	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6180	False	NA	-4	True	AATAAA	-15	NA	127024645	127018394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976
ES.3969.30	chr10	-	2227	5	NNC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	-343	-8	intron_retention	FALSE	canonical	0	0	junction_4	56.1114961482939	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTATGCCACACCCGT	NA	False	NA	-8	True	AATAAA	-17	NA	127031940	127026254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031768
ES.3969.31	chr10	-	2421	5	NIC	ENSMUSG00000040415.16	novel	1925	6	NA	NA	-189	-8	intron_retention	FALSE	canonical	3	4	junction_2	54.3162038437886	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTATGCCACACCCGT	NA	False	NA	-8	True	AATAAA	-17	NA	127031786	127026254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127027423_127028477_127029208_127029598_127029673_127030278_127030504_127031562
ES.3969.32	chr10	-	3669	3	NIC	ENSMUSG00000040415.16	novel	1994	5	NA	NA	4	-8	intron_retention	FALSE	canonical	3	105	junction_1	23.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTATGCCACACCCGT	NA	False	NA	-8	True	AATAAA	-17	NA	127031584	127026254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127027423_127028477_127029673_127030278
ES.3969.4	chr10	-	3394	14	ISM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	9	0	9	0	intron_retention	FALSE	canonical	3	18	junction_9	9.13864283684445	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6193	False	NA	-4	True	AATAAA	-15	NA	127024632	127018394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976
ES.3969.5	chr10	-	2634	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-45	0	intron_retention	FALSE	canonical	3	18	junction_8	9.21922354866377	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6139	False	NA	-4	True	AATAAA	-15	NA	127024686	127018394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.3969.6	chr10	-	2859	13	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-31	0	intron_retention	FALSE	canonical	3	18	junction_7	9.55539405548277	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6153	False	NA	-4	True	AATAAA	-15	NA	127024672	127018394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.3969.7	chr10	-	2549	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	-74	0	-74	0	multi-exon	FALSE	canonical	3	18	junction_9	9.18628080901302	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6110	False	NA	-4	True	AATAAA	-15	NA	127024715	127018394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.3969.8	chr10	-	2848	13	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-42	-1	intron_retention	FALSE	canonical	3	18	junction_12	9.10547759440559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGGTTGTTGTCTTGG	6142	False	NA	-5	True	AATAAA	-14	NA	127024683	127018395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.3969.9	chr10	-	2747	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	-57	0	intron_retention	FALSE	canonical	3	18	junction_13	9.13864283684445	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	6127	False	NA	-7	True	AATAAA	-12	NA	127024698	127018397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ES.397.1	chr1	-	5135	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	44	-2820	1	2820	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCAGTGTTGGCTCCTG	NA	False	NA	NA	False	AGTAAA	-16	NA	44157924	44142885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.10	chr1	-	2338	9	NNC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_3	108.635571982661	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157938	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149664_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.11	chr1	-	1997	9	NNC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	-11	0	intron_retention	FALSE	canonical	2	5	junction_5	108.580327407869	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157936	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152227_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.12	chr1	-	409	3	NNC	ENSMUSG00000101104.7	novel	521	6	NA	NA	-38	-15323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	183.5	162	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44149243	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146258_44146924_44147033_44149153
ES.397.13	chr1	-	1565	8	NIC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	116.41270706992	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157926	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.14	chr1	-	4022	7	NIC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	-11	0	intron_retention	FALSE	canonical	3	275	junction_6	38.5072143312854	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157936	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44146265_44146924_44147033_44149153_44150105_44151804_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.15	chr1	-	1817	10	NNC	ENSMUSG00000026047.14	novel	2359	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	103.965925092056	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157956	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156386_44156404_44157477
ES.397.16	chr1	-	3359	8	NIC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	275	junction_7	35.8278195409827	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157924	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.17	chr1	-	1932	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	-26	453	-26	-112	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTACGTGTGCCCATTC	NA	False	NA	6	True	TATAAA	-34	NA	44157994	44146158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.18	chr1	-	1872	9	NNC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	-11	-125	intron_retention	FALSE	canonical	2	5	junction_5	108.580327407869	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGACAATGTCAAATTTA	NA	False	NA	-7	True	TATAAA	-21	NA	44157936	44146171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152227_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.2	chr1	-	5085	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-11	-2989	1	2650	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGGCTCCGTTTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	44157924	44143055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.3	chr1	-	4989	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	16	-2646	16	2646	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATTTGTTGGCTCCGTT	NA	False	NA	NA	False	CATAAA	-14	NA	44157952	44143059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.4	chr1	-	2330	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	31	-2	-12	2	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCTGCCTCTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	44157937	44145703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.5	chr1	-	2364	10	NNC	ENSMUSG00000026047.14	novel	2359	10	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	99.7145308083079	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGCCTCTGCCTCTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	44157924	44145703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152115_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.6	chr1	-	2585	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	-567	341	-567	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44158535	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.7	chr1	-	2158	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	-75	2	-20	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157988	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.8	chr1	-	2746	8	NIC	ENSMUSG00000026047.14	novel	1765	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	275	junction_4	38.4075885358982	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157925	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44146265_44146924_44147033_44149153_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ES.397.9	chr1	-	7028	6	NIC	ENSMUSG00000026047.14	novel	2085	9	NA	NA	20	0	intron_retention	FALSE	canonical	3	275	junction_3	35.1226422696243	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCTGTTTTGTTACAG	NA	False	NA	-7	True	AATAAA	-15	NA	44157948	44146046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_44146265_44146924_44150105_44151804_44152336_44153600_44153679_44153853_44156404_44157477
ES.3970.1	chr10	-	3448	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-136	-5	-106	5	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTTTTGTTTTTTAAA	NA	False	NA	1	True	AATAAA	-28	NA	127047560	127032930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.13	chr10	-	3370	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	125.158566093842	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTCACAGAAGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	127047454	127032941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044876_127047206
ES.3970.14	chr10	-	3445	11	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	153.885054504978	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTCACAGAAGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	127047485	127032941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127046896_127046980_127047206
ES.3970.15	chr10	-	3062	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	134.311903791138	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTCACAGAAGTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	127047453	127032941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035014_127035181_127035286_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.17	chr10	-	3167	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-11	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	125.309616550367	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047435	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127042482_127042580_127044738_127044837_127047206
ES.3970.18	chr10	-	8084	7	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	37	-7	intron_retention	FALSE	canonical	3	316	junction_2	33.3587403172775	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047387	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035014_127035181_127035726_127036052_127036167_127036708_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.19	chr10	-	3361	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	127.258946664558	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047473	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042470_127042580_127044738_127044837_127047206
ES.3970.2	chr10	-	7993	8	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	8	3	intron_retention	FALSE	canonical	3	316	junction_2	32.3835433137114	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGTTTTTGTTTTTTA	NA	False	NA	-1	True	AATAAA	-26	NA	127047446	127032932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035014_127035181_127035726_127036052_127036167_127036708_127036748_127036907_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.20	chr10	-	3272	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.500859353192	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047405	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035181_127035286_127035466_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.21	chr10	-	9386	4	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	25	-7	intron_retention	FALSE	canonical	3	372	junction_1	16.3367343397905	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047399	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127036167_127036708_127042580_127044738_127044837_127047206
ES.3970.22	chr10	-	5569	9	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	7	-7	intron_retention	FALSE	canonical	2	25	junction_1	124.712607121333	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTCACAGAAGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	127047447	127032942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127034618_127034913_127035014_127035181_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738
ES.3970.24	chr10	-	1728	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	21	1558	21	-1558	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTATGGGGCACTTTGT	NA	False	NA	NA	False	AAGAAA	-24	NA	127047403	127034493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.3	chr10	-	3500	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	8	3	combination_of_known_junctions	FALSE	canonical	3	316	junction_2	42.5521738575128	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGTTTTTGTTTTTTA	NA	False	NA	-1	True	AATAAA	-26	NA	127047446	127032932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.4	chr10	-	3508	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	316	junction_2	45.549423706563	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047453	127032935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127035014_127035181_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.5	chr10	-	3412	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	118.633682473756	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047465	127032935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035117_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.7	chr10	-	3059	11	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_1	114.041264461597	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGAAGTTTTTGTTT	NA	False	NA	-5	True	AATAAA	-22	NA	127047473	127032936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127034618_127034913_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ES.3970.8	chr10	-	3409	11	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	154.273944656899	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCACAGAAGTTTTTGT	NA	False	NA	-7	True	AATAAA	-20	NA	127047470	127032938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127046920_127046980_127047206
ES.3970.9	chr10	-	5677	9	ISM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	-4	4	-4	-4	intron_retention	FALSE	canonical	3	316	junction_3	44.6961967062076	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTCACAGAAGTTTTTG	NA	False	NA	-8	True	AATAAA	-19	NA	127047428	127032939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738
ES.3971.1	chr10	-	270	1	Intergenic	novelGene_3055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATTTTGAAG	9023	False	NA	NA	False	NA	NA	NA	127051339	127051069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127051100_127051300
ES.3972.1	chr10	+	806	2	Antisense	novelGene_ENSMUSG00000074657.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGCAGGACATTTTTT	2572	False	NA	NA	False	NA	NA	NA	127072969	127074012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_127073258_127073494
ES.3973.1	chr10	+	1782	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-142	144	-123	-144	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGTTCCTGG	9074	False	NA	22	True	ATTAAA	-17	NA	127102113	127117675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.12	chr10	+	1763	15	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	5	-145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	235.861858566684	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9202	False	NA	21	True	ATTAAA	-16	NA	127102241	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127116036_127116147_127117269
ES.3973.13	chr10	+	2710	10	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-3	2	intron_retention	FALSE	canonical	3	611	junction_4	36.0739980225832	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9213	False	NA	18	True	AATAAA	-20	NA	127102252	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.14	chr10	+	2266	18	Fusion	ENSMUSG00000025410.11_ENSMUSG00000025408.16	novel	1784	14	NA	NA	-2	3	multi-exon	FALSE	canonical	0	0	junction_14	219.083416197108	460	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTTTTTCTTCTTGCC	9214	False	NA	32	True	AGTAAA	-21	NA	127102253	127132160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269_127117353_127120144_127120317_127129580_127129629_127131189_127131348_127131591
ES.3973.15	chr10	+	2756	11	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-2	-145	intron_retention	FALSE	canonical	3	641	junction_10	28.2814426789017	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9214	False	NA	21	True	ATTAAA	-16	NA	127102253	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127111792_127112252_127112414_127112570_127112719_127113123_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.17	chr10	+	2370	12	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	604	junction_7	38.9483659042529	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9216	False	NA	16	True	AATAAA	-18	NA	127102255	127117819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.18	chr10	+	1717	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_7	188.740323519438	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9217	False	NA	16	True	AATAAA	-18	NA	127102256	127117819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.19	chr10	+	1966	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	1	2	intron_retention	FALSE	canonical	3	604	junction_8	37.2904329404861	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9217	False	NA	18	True	AATAAA	-20	NA	127102256	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.2	chr10	+	1884	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	-98	-2	-79	2	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9118	False	NA	18	True	AATAAA	-20	NA	127102157	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.21	chr10	+	2152	11	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	4	-144	intron_retention	FALSE	canonical	3	611	junction_4	34.3139913154969	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGTTCCTGG	9220	False	NA	22	True	ATTAAA	-17	NA	127102259	127117675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.22	chr10	+	1726	15	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	176.251284551695	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9225	False	NA	16	True	AATAAA	-18	NA	127102264	127117819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112322_127112370_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.24	chr10	+	8964	7	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	16	2	intron_retention	FALSE	canonical	0	0	junction_2	251.708605777042	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9232	False	NA	18	True	AATAAA	-20	NA	127102271	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127108913_127110582_127110680_127110862_127110925_127111692_127114092_127114185_127114278_127117269
ES.3973.25	chr10	+	10782	7	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	16	-145	intron_retention	FALSE	canonical	3	641	junction_6	30.1919783312647	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9232	False	NA	21	True	ATTAAA	-16	NA	127102271	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127112414_127112570_127112719_127113123_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.26	chr10	+	9027	12	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	24	-145	intron_retention	FALSE	canonical	3	604	junction_7	38.751806142925	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9240	False	NA	21	True	ATTAAA	-16	NA	127102279	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.27	chr10	+	1618	14	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	27	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.150597684132	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGAGTCTCTGCTGTGTT	9243	False	NA	17	True	ATTAAA	-12	NA	127102282	127117670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103362_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.28	chr10	+	1594	13	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	34	-145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	254.602672478773	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9250	False	NA	21	True	ATTAAA	-16	NA	127102289	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103362_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113205_127113560_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.30	chr10	+	2000	12	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	46	2	intron_retention	FALSE	canonical	3	611	junction_4	32.4663843952861	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9262	False	NA	18	True	AATAAA	-20	NA	127102301	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113395_127113563_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.32	chr10	+	4878	12	NNC	ENSMUSG00000025410.11	novel	820	5	NA	NA	2915	2	intron_retention	FALSE	canonical	0	0	junction_1	195.299346416581	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	NA	False	NA	18	True	AATAAA	-20	NA	127105170	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127108314_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.33	chr10	+	5473	12	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	4425	-4	4425	4	3prime_fragment	FALSE	canonical	3	604	junction_6	36.5072165400778	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	NA	False	NA	20	True	AATAAA	-22	NA	127106680	127117823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.34	chr10	+	4490	11	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-5136	-144	intron_retention	FALSE	canonical	3	604	junction_5	38.2728363202938	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGTTCCTGG	NA	False	NA	22	True	ATTAAA	-17	NA	127107672	127117675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127110680_127110862_127110925_127111692_127111792_127112252_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.35	chr10	+	3037	12	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	6712	145	-3841	-145	3prime_fragment	FALSE	canonical	3	604	junction_6	36.5072165400778	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	NA	False	NA	21	True	ATTAAA	-16	NA	127108967	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.36	chr10	+	1455	11	ISM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	8478	144	-2075	-144	3prime_fragment	FALSE	canonical	3	604	junction_5	37.7311542362542	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCTGCTGTGTTCCTGG	NA	False	NA	22	True	ATTAAA	-17	NA	127110733	127117675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.37	chr10	+	2298	6	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-1947	-2	intron_retention	FALSE	canonical	1	1	junction_2	271.034757918611	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACCAGAGTTTCAAAA	NA	False	NA	14	True	AATAAA	-16	NA	127110861	127117817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127111792_127112252_127112414_127113355_127113395_127113563_127114092_127114185_127114278_127117269
ES.3973.38	chr10	+	2026	5	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-662	1	intron_retention	FALSE	canonical	3	641	junction_4	26.6364412037344	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAGTTTCAAAATAT	NA	False	NA	17	True	AATAAA	-19	NA	127112146	127117820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127112414_127112570_127112719_127113123_127114092_127114185_127114278_127117269
ES.3973.39	chr10	+	919	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	-30	1	-30	-1	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTCACTTTTTCTTCT	NA	False	NA	28	True	AGTAAA	-17	NA	127126612	127132156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
ES.3973.4	chr10	+	3439	9	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-20	2	intron_retention	FALSE	canonical	3	641	junction_8	29.0688837074973	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGAGTTTCAAAATATT	9177	False	NA	18	True	AATAAA	-20	NA	127102216	127117821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127111792_127112252_127112414_127112570_127113395_127113563_127114092_127114185_127114278_127117269
ES.3973.40	chr10	+	5188	3	NNC	ENSMUSG00000025408.16	novel	600	3	NA	NA	-10	3	intron_retention	FALSE	non_canonical	0	0	junction_1	357	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTTTTTCTTCTTGCC	NA	False	NA	32	True	AGTAAA	-21	NA	127126632	127132160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127129419_127129514_127131348_127131591
ES.3973.41	chr10	+	5249	2	NIC	ENSMUSG00000025408.16	novel	600	3	NA	NA	0	-2	intron_retention	FALSE	canonical	3	714	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTCACTTTTTCTTC	NA	False	NA	27	True	AGTAAA	-16	NA	127126662	127132155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127131348_127131591
ES.3973.42	chr10	+	3687	3	NIC	ENSMUSG00000025408.16	novel	890	4	NA	NA	1	-2	intron_retention	FALSE	canonical	3	645	junction_1	34.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTCACTTTTTCTTC	NA	False	NA	27	True	AGTAAA	-16	NA	127126663	127132155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127129629_127131189_127131348_127131591
ES.3973.43	chr10	+	816	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	3	-219	2	-4	multi-exon	FALSE	canonical	0	0	junction_1	357	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTCTCACTTTTTCT	NA	False	NA	25	True	AGTAAA	-14	NA	127126664	127132153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127126761_127131189_127131348_127131591
ES.3973.46	chr10	+	1179	4	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	336.582827844797	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTCTCACTTTTTCT	NA	False	NA	25	True	AGTAAA	-14	NA	127126667	127132153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127126761_127129580_127129629_127130871_127131348_127131591
ES.3973.47	chr10	+	5397	2	NNC	ENSMUSG00000025408.16	novel	969	2	NA	NA	5	3	intron_retention	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCACTTTTTCTTCTTGCC	NA	False	NA	32	True	AGTAAA	-21	NA	127126667	127132160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127129419_127129514
ES.3973.48	chr10	+	2034	1	NIC	ENSMUSG00000025408.16	novel	890	4	NA	NA	5	-1750	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAACCAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	127126667	127128701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127126700_127128700
ES.3973.49	chr10	+	5491	1	Genic_Genomic	ENSMUSG00000116429.2_ENSMUSG00000025408.16	novel	NA	NA	NA	NA	5	1	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCACTTTTTCTTCTTG	NA	False	NA	30	True	AGTAAA	-19	NA	127126667	127132158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_127126700_127132200
ES.3973.5	chr10	+	9173	11	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-20	4	intron_retention	FALSE	canonical	3	4	junction_6	203.783242686929	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGTTTCAAAATATTCT	9177	False	NA	20	True	AATAAA	-22	NA	127102216	127117823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
ES.3973.51	chr10	+	3719	4	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	336.582827844797	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126769	127132157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127129629_127130871_127131008_127131189_127131348_127131591
ES.3973.6	chr10	+	1767	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-15	-145	intron_retention	FALSE	canonical	3	604	junction_8	36.3893871891242	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCTGCTGTGTTCCTG	9182	False	NA	21	True	ATTAAA	-16	NA	127102221	127117674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.7	chr10	+	1826	14	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	182.150597684132	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACCAGAGTTTCAAAA	9182	False	NA	14	True	AATAAA	-16	NA	127102221	127117817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103362_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3973.9	chr10	+	1926	15	NNC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	236.926805626737	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAGAGTTTCAAAATAT	9185	False	NA	17	True	AATAAA	-19	NA	127102224	127117820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127102404_127103282_127103352_127108802_127108913_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ES.3974.1	chr10	+	2932	1	Antisense	novelGene_ENSMUSG00000040354.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACAGTGGTCTGTGG	4219	False	NA	NA	False	ACTAAA	-1	NA	127133865	127136797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_127133900_127136800
ES.3975.1	chr10	+	1425	1	Antisense	novelGene_ENSMUSG00000040354.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTGTGTGGT	5949	False	NA	NA	False	NA	NA	NA	127147125	127148550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_127147100_127148600
ES.3976.1	chr10	+	2359	15	NIC	ENSMUSG00000040345.11	novel	2217	16	NA	NA	255	0	intron_retention	FALSE	canonical	3	14	junction_1	20.7920952404945	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	7344	False	NA	10	True	ATTAAA	-16	NA	127158087	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127158301_127158562_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164394_127164746_127164853_127165367
ES.3976.10	chr10	+	1674	13	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1719	0	1152	0	3prime_fragment	FALSE	canonical	3	31	junction_1	12.0031824483713	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127161343	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.11	chr10	+	1715	12	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1892	-1	1325	1	3prime_fragment	FALSE	canonical	3	51	junction_1	7.05117070169648	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAGACTAAATAC	NA	False	NA	11	True	ATTAAA	-17	NA	127161516	127165813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.12	chr10	+	2324	8	NIC	ENSMUSG00000040345.11	novel	1782	15	NA	NA	1332	1	intron_retention	FALSE	canonical	3	51	junction_1	8.1390968761395	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAGACTAAATAC	NA	False	NA	11	True	ATTAAA	-17	NA	127161523	127165813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127161772_127161916_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.14	chr10	+	2861	7	NIC	ENSMUSG00000040345.11	novel	2998	12	NA	NA	1734	1	intron_retention	FALSE	canonical	3	63	junction_4	5.89962334014262	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAGACTAAATAC	NA	False	NA	11	True	ATTAAA	-17	NA	127161925	127165813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127162011_127162200_127162297_127162421_127162884_127162963_127163606_127163767_127163846_127163962_127164394_127164746
ES.3976.15	chr10	+	2143	9	NIC	ENSMUSG00000040345.11	novel	1782	15	NA	NA	1798	0	intron_retention	FALSE	canonical	3	63	junction_5	5.65685424949238	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127161989	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164394_127164746
ES.3976.16	chr10	+	1392	11	NNC	ENSMUSG00000040345.11	novel	2217	16	NA	NA	1892	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.5951450589696	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127162083	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127162111_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.17	chr10	+	1388	10	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	2550	3	1983	-3	3prime_fragment	FALSE	canonical	3	63	junction_4	5.45916377623922	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAACATACATAGACTAA	NA	False	NA	7	True	ATTAAA	-13	NA	127162174	127165809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.18	chr10	+	1878	8	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	2703	0	2136	0	intron_retention	FALSE	canonical	3	63	junction_3	5.43608502584013	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127162327	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746
ES.3976.19	chr10	+	1336	9	NNC	ENSMUSG00000040345.11	novel	1782	15	NA	NA	2151	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.2879410822195	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGACTAAATACAGCCC	NA	False	NA	16	True	ATTAAA	-22	NA	127162342	127165818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127162521_127162741_127162884_127162963_127163063_127163506_127163606_127163773_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.2	chr10	+	1965	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219511.2	2217	16	406	-154	406	-1	multi-exon	FALSE	canonical	3	14	junction_1	20.2809160433042	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACATACATAGACTAAAT	7495	False	NA	9	True	ATTAAA	-15	NA	127158238	127165811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127158301_127158562_127158760_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.3	chr10	+	2514	15	NIC	ENSMUSG00000040345.11	novel	2217	16	NA	NA	-847	2	intron_retention	FALSE	canonical	2	2	junction_1	20.4506623813688	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATACATAGACTAAATACA	7985	False	NA	12	True	ATTAAA	-18	NA	127158728	127165814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127158760_127160213_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.4	chr10	+	1966	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	-19	-1	-19	1	multi-exon	FALSE	canonical	2	5	junction_1	22.9759294335035	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAGACTAAATAC	8813	False	NA	11	True	ATTAAA	-17	NA	127159556	127165813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.5	chr10	+	3370	13	NIC	ENSMUSG00000040345.11	novel	1782	15	NA	NA	-8	1	intron_retention	FALSE	canonical	3	31	junction_2	14.5322916293336	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAGACTAAATAC	8824	False	NA	11	True	ATTAAA	-17	NA	127159567	127165813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164394_127164746_127164853_127165367
ES.3976.6	chr10	+	1962	16	NIC	ENSMUSG00000040345.11	novel	1946	16	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	24.6432321112489	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	8848	False	NA	10	True	ATTAAA	-16	NA	127159591	127165812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164885_127165367
ES.3976.7	chr10	+	1744	15	FSM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	-28	66	21	-66	multi-exon	FALSE	canonical	1	1	junction_1	20.6447107422859	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTCTCAGTATTCC	8853	False	NA	-56	True	NA	NA	NA	127159596	127165746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127159700_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.8	chr10	+	2154	16	NNC	ENSMUSG00000040345.11	novel	1946	16	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.9790649433116	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACATACATAGACTAAAT	8855	False	NA	9	True	ATTAAA	-15	NA	127159598	127165811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127159700_127160213_127160473_127160899_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3976.9	chr10	+	1747	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	36	163	-13	-8	multi-exon	FALSE	canonical	2	5	junction_1	22.9759294335035	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCGCTCCAGTCTCAC	8868	False	NA	NA	False	NA	NA	NA	127159611	127165649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ES.3977.1	chr10	+	4282	25	Fusion	ENSMUSG00000112426.2_ENSMUSG00000025404.16	novel	3975	25	NA	NA	-84	-2	multi-exon	TRUE	canonical	0	0	junction_1	47.2603420486517	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCGCTGTTTGTTTCAC	397	False	NA	18	True	TATAAA	-34	NA	127168175	127335250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127168587_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.10	chr10	+	3934	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-53	70	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	47.7260520226288	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCACTTTCCCCATCTCG	NA	False	NA	6	True	AATAAA	-15	NA	127216477	127334970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321269_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.11	chr10	+	4106	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	41.0995379862634	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTTTGTTTCACTGT	NA	False	NA	21	True	TATAAA	-37	NA	127216477	127335253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.12	chr10	+	4177	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-52	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	47.7260520226288	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCACTGGCCATCAGT	NA	False	NA	3	True	TATAAA	-19	NA	127216478	127335235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320886_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.14	chr10	+	4053	24	NNC	ENSMUSG00000025404.16	novel	3975	25	NA	NA	-45	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	61.3998331309346	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTATAAATATAAAAAAAG	NA	False	NA	-24	True	NA	NA	NA	127216485	127335208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216808_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333409_127333495_127334237
ES.3977.15	chr10	+	3828	23	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-44	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	47.9080558797977	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127216486	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127330924_127334266
ES.3977.16	chr10	+	3805	25	NNC	ENSMUSG00000025404.16	novel	3975	25	NA	NA	-44	71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.2603420486517	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACTTTCCCCATCTCGT	NA	False	NA	7	True	AATAAA	-16	NA	127216486	127334971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216700_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.17	chr10	+	3976	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-44	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	46.8734369619681	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAAAAAAAGCAAAAAA	NA	False	NA	-17	True	NA	NA	NA	127216486	127335215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.18	chr10	+	4083	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-41	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	47.6648666053584	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127216489	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.19	chr10	+	4004	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-41	65	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	56.9372426448629	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCGTTCACTTTCCCCA	NA	False	NA	1	True	AATAAA	-10	NA	127216489	127334965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.2	chr10	+	3178	1	Antisense	novelGene_ENSMUSG00000047492.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAATGCCTCACTTTTCC	59	False	NA	NA	False	NA	NA	NA	127187843	127191021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_127187800_127191000
ES.3977.21	chr10	+	4239	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-41	-4	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	55.4173113746959	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCAGTCGCTGTTTGTTTC	NA	False	NA	16	True	TATAAA	-32	NA	127216489	127335248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.22	chr10	+	4071	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	59.9499212306034	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAAGCAAAAAAACC	NA	False	NA	-14	True	TATAAA	-2	NA	127216493	127335218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298074_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328499_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.23	chr10	+	4039	23	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-36	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	49.0606177588097	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCACTGGCCATCAGT	NA	False	NA	3	True	TATAAA	-19	NA	127216494	127335235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.25	chr10	+	4112	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-36	6	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_20	46.1254328495198	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCCATCAGTCGCTGTT	NA	False	NA	10	True	TATAAA	-26	NA	127216494	127335242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328499_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.26	chr10	+	4248	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.2269932230381	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGGCCATCAGTCGC	NA	False	NA	6	True	TATAAA	-22	NA	127216494	127335238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127297978_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.27	chr10	+	1553	13	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-35	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	63.9454520144579	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACTGGATTCTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	127216495	127301180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127300999
ES.3977.28	chr10	+	4159	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-34	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	46.0555031999434	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCACTGGCCATCAGT	NA	False	NA	3	True	TATAAA	-19	NA	127216496	127335235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333415_127333495_127334237
ES.3977.29	chr10	+	4282	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	56.9372426448629	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTTTGTTTCACTGT	NA	False	NA	21	True	TATAAA	-37	NA	127216499	127335253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.3	chr10	+	3835	24	NNC	ENSMUSG00000025404.16	novel	3975	25	NA	NA	-28345	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.3846504706688	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCATCAGTCGCTGT	66	False	NA	9	True	TATAAA	-25	NA	127187850	127335241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127187920_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.30	chr10	+	3962	24	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-27	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	57.6475832653261	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGTAAATTTTATTTA	NA	False	NA	1	True	NA	NA	NA	127216503	127335131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300887_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.31	chr10	+	4328	27	FSM	ENSMUSG00000025404.16	ENSMUST00000166820.8	4281	27	-27	-20	-27	-3	multi-exon	FALSE	canonical	3	12	junction_16	71.579733752115	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCGCTGTTTGTTTCA	NA	False	NA	17	True	TATAAA	-33	NA	127216503	127335249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.32	chr10	+	3879	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-23	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	47.8147285246804	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCGTTCACTTTCCCCAT	NA	False	NA	2	True	AATAAA	-11	NA	127216507	127334966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294013_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.34	chr10	+	3763	22	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.3071292784216	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	NA	False	NA	4	True	TATAAA	-20	NA	127216514	127335236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.35	chr10	+	3941	23	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-16	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	49.1516459289072	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127216514	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.36	chr10	+	4564	22	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-16	1623	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	24.5676445960481	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	127216514	127332635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889
ES.3977.37	chr10	+	4151	25	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	47.5788636254471	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATCAGTCGCTGTTTGT	NA	False	NA	13	True	TATAAA	-29	NA	127216514	127335245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331032_127333030_127333129_127333409_127333495_127334237
ES.3977.39	chr10	+	3948	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	48.8457314618339	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGGCCATCAGTCG	NA	False	NA	5	True	TATAAA	-21	NA	127216515	127335237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.4	chr10	+	4261	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	25.3408705892718	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTTTGTTTCACTGT	NA	False	NA	21	True	TATAAA	-37	NA	127216418	127335253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.41	chr10	+	4227	26	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.2269042870377	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	NA	False	NA	4	True	TATAAA	-20	NA	127216517	127335236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127278999_127279082_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.43	chr10	+	3830	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-6	70	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	63.6322851101022	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCACTTTCCCCATCTCG	NA	False	NA	6	True	AATAAA	-15	NA	127216524	127334970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.44	chr10	+	4147	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-6	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	65.118908331008	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGGCCATCAGTCGCT	NA	False	NA	7	True	TATAAA	-23	NA	127216524	127335239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.45	chr10	+	1616	14	ISM	ENSMUSG00000025404.16	ENSMUST00000166820.8	4281	27	-3	34050	-3	-2	5prime_fragment	FALSE	canonical	3	23	junction_13	49.2785825508897	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATACTGGATTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	127216527	127301179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999
ES.3977.46	chr10	+	3976	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	48.088450326668	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCGCTGTTTGTTTCA	NA	False	NA	17	True	TATAAA	-33	NA	127216529	127335249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.47	chr10	+	3651	23	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	25	65	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	49.1516459289072	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCGTTCACTTTCCCCA	NA	False	NA	1	True	AATAAA	-10	NA	127216555	127334965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.48	chr10	+	4083	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	27	-1	combination_of_known_junctions	FALSE	canonical	1	8	junction_20	45.9569356088453	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCACTGGCCATCAGT	NA	False	NA	3	True	TATAAA	-19	NA	127216557	127335235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328458_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.49	chr10	+	5675	24	NNC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	19	2	intron_retention	FALSE	non_canonical	0	0	junction_22	47.595173779573	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGGCCATCAGTCGC	NA	False	NA	6	True	TATAAA	-22	NA	127216686	127335238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331961_127332537_127333495_127334237
ES.3977.5	chr10	+	4197	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-70	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	47.2269932230381	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCGCTGTTTGTTTCA	NA	False	NA	17	True	TATAAA	-33	NA	127216460	127335249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298074_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.51	chr10	+	3691	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	45	71	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	65.118908331008	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCACTTTCCCCATCTCGT	NA	False	NA	7	True	AATAAA	-16	NA	127216712	127334971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.52	chr10	+	4258	21	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	57	1623	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	42.0144022925473	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	127216724	127332635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889
ES.3977.53	chr10	+	3552	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	57	67	combination_of_known_junctions	FALSE	canonical	1	8	junction_19	56.062549458581	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTTCACTTTCCCCATC	NA	False	NA	3	True	AATAAA	-12	NA	127216724	127334967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328458_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.55	chr10	+	3800	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	78	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_19	56.062549458581	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	NA	False	NA	4	True	TATAAA	-20	NA	127216745	127335236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328458_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.56	chr10	+	3505	24	ISM	ENSMUSG00000025404.16	ENSMUST00000077046.12	4029	26	54020	284	20	68	3prime_fragment	FALSE	canonical	3	12	junction_13	75.9870151080325	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTCACTTTCCCCATCT	5210	False	NA	4	True	AATAAA	-13	NA	127280199	127334968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.57	chr10	+	160	1	Intergenic	novelGene_3063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	127286617	127286777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127286600_127286800
ES.3977.58	chr10	+	3454	21	ISM	ENSMUSG00000025404.16	ENSMUST00000105249.9	3654	22	7677	39	-7477	-4	3prime_fragment	FALSE	canonical	3	158	junction_7	24.6383846873126	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127287856	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.59	chr10	+	3093	17	NNC	ENSMUSG00000025404.16	novel	3739	23	NA	NA	-597	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	80.9532803149446	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	3942	False	NA	-18	True	NA	NA	NA	127294736	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333415_127333495_127334237
ES.3977.6	chr10	+	3837	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-65	72	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	41.0995379862634	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTTCCCCATCTCGTC	NA	False	NA	8	True	AATAAA	-17	NA	127216465	127334972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.60	chr10	+	5472	1	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	2616	2310	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATAGTGATCTTGCACA	2573	False	NA	NA	False	NA	NA	NA	127298019	127303491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127298000_127303500
ES.3977.61	chr10	+	4257	13	NNC	ENSMUSG00000025404.16	novel	3739	23	NA	NA	3917	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.7399837070074	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	3874	False	NA	4	True	TATAAA	-20	NA	127299320	127335236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127300883_127307636_127307870_127312388_127312568_127319848_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.63	chr10	+	6848	12	ISM	ENSMUSG00000025404.16	ENSMUST00000169888.8	2906	15	8124	16	8084	0	3prime_fragment	FALSE	canonical	3	158	junction_2	23.9331023569815	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	8041	False	NA	4	True	TATAAA	-20	NA	127303487	127335236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.64	chr10	+	2472	11	ISM	ENSMUSG00000025404.16	ENSMUST00000169888.8	2906	15	17023	12	-4796	4	3prime_fragment	FALSE	canonical	3	158	junction_1	25.0097980799526	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGCCATCAGTCGCTG	NA	False	NA	8	True	TATAAA	-24	NA	127312386	127335240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.65	chr10	+	177	1	Intergenic	novelGene_3064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127315467	127315644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127315500_127315600
ES.3977.66	chr10	+	4205	5	NNC	ENSMUSG00000025404.16	novel	2906	15	NA	NA	94	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	100.857572844085	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATATAAAAAAAGCAAAAA	NA	False	NA	-18	True	NA	NA	NA	127321253	127335214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127321440_127323643_127323745_127328437_127328608_127330889_127331955_127332531
ES.3977.7	chr10	+	3946	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-65	85	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	25.3408705892718	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTCCCCAAACCCCA	NA	False	NA	21	True	AATAAA	-30	NA	127216465	127334985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.8	chr10	+	4720	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-59	512	combination_of_known_junctions	FALSE	canonical	3	158	junction_11	25.3408705892718	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAAGGTGGTCACTCAC	NA	False	NA	NA	False	AATAAA	-18	NA	127216471	127335765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ES.3977.9	chr10	+	4706	23	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	-56	1623	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	58.4799888073612	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAACTCTTCC	NA	False	NA	NA	False	NA	NA	NA	127216474	127332635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889
ES.3978.1	chr10	-	3526	1	Genic_Genomic	ENSMUSG00000074657.6	novel	NA	NA	NA	NA	33993	134	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGGAACTGGAGGTACC	5322	False	NA	NA	False	NA	NA	NA	127064956	127061430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_127061400_127065000
ES.3978.10	chr10	-	4336	4	NNC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	32290	-1	intron_retention	FALSE	canonical	0	0	junction_3	22.6274169979695	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTGTTGCTTCTTAT	3619	False	NA	-1	True	AATAAA	-15	NA	127066659	127061565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127065726_127066017_127066046_127066437_127066506_127066579
ES.3978.13	chr10	-	7674	27	NIC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	28	junction_12	6.85274099697323	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGCTGTTGCTTCTTA	NA	False	NA	-2	True	AATAAA	-14	NA	127098983	127061566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.15	chr10	-	4069	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	223	2003	-30	1351	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATCTTCTGAAAATTC	NA	False	NA	NA	False	NA	NA	NA	127098994	127063567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.16	chr10	-	3548	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	235	2512	-18	842	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGTCTCCCTTCCTCGT	NA	False	NA	NA	False	NA	NA	NA	127098982	127064076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.17	chr10	-	4861	30	NNC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	-3348	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	11.8237150596641	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTGTCCATCGGTCT	NA	False	NA	-7	True	ATTAAA	-18	NA	127102565	127064918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636_127099223_127100348_127100503_127102127
ES.3978.18	chr10	-	4325	27	NIC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	28	junction_12	7.03961739143197	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGCTGTCCATCGGT	NA	False	NA	-9	True	ATTAAA	-16	NA	127098993	127064920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127065726_127066017_127066046_127066437_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.19	chr10	-	5201	24	NIC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	3	-2	intron_retention	FALSE	canonical	3	28	junction_9	6.9107187778454	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGCTGTCCATCGGT	NA	False	NA	-9	True	ATTAAA	-16	NA	127098961	127064920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127065726_127066017_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.2	chr10	-	6574	18	NIC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	19628	1	intron_retention	FALSE	canonical	3	28	junction_13	6.23140833415606	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTGCTTCTTATTC	NA	False	NA	1	True	AATAAA	-17	NA	127079321	127061563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228
ES.3978.20	chr10	-	4130	29	NNC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	-60	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	12.0161456009005	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGCTGTCCATCGGT	NA	False	NA	-9	True	ATTAAA	-16	NA	127099024	127064920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127079760_127079822_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.21	chr10	-	4328	28	NNC	ENSMUSG00000074657.6	novel	3996	28	NA	NA	-120	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	9.94277177463177	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTGCTGTCCATCGGT	NA	False	NA	-9	True	ATTAAA	-16	NA	127099084	127064920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083192_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.22	chr10	-	2362	3	ISM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	27403	2643	27403	-2643	internal_fragment	FALSE	canonical	3	38	junction_2	3	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAGAAAACAGGGAG	NA	False	NA	NA	False	NA	NA	NA	127071546	127067561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127069791_127069915_127069988_127071485
ES.3978.3	chr10	-	6276	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	20	-1	20	1	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTGCTTCTTATTC	NA	False	NA	1	True	AATAAA	-17	NA	127099197	127061563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.4	chr10	-	7410	28	FSM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	-59	-3355	-44	1	multi-exon	FALSE	canonical	3	28	junction_13	6.98675996544999	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTTGCTTCTTATTC	NA	False	NA	1	True	AATAAA	-17	NA	127099008	127061563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.5	chr10	-	3729	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	9.36307064144743	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	0	True	AATAAA	-16	NA	127099218	127061564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127061724_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3978.6	chr10	-	5065	1	NIC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	32320	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	3649	False	NA	0	True	AATAAA	-16	NA	127066629	127061564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127061600_127066600
ES.3978.7	chr10	-	5611	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.8746227283997	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	0	True	AATAAA	-16	NA	127099024	127061564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127063800_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ES.3979.1	chr10	-	3110	3	ISM	ENSMUSG00000025409.15	ENSMUST00000154851.2	543	5	714	-2561	24	1841	3prime_fragment	FALSE	canonical	3	104	junction_2	4.5	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGTTCATCCAATAGAA	1624	False	NA	NA	False	NA	NA	NA	127119513	127115983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127118777_127118893_127118958_127119260
ES.3979.10	chr10	-	4101	12	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_8	36.0683465081879	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124871	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122181_127122662_127122826_127122936_127123040_127123264_127123560_127124577
ES.3979.100	chr10	-	2787	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	424.694863990607	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147516	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144228_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.101	chr10	-	8972	16	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	26	-2	intron_retention	FALSE	canonical	1	24	junction_15	482.836038422983	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147521	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146402_127147389
ES.3979.102	chr10	-	5380	18	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-2	intron_retention	FALSE	canonical	3	1393	junction_12	180.023931511772	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147522	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.105	chr10	-	4833	16	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1496	junction_8	177.890303277048	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147544	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127136450_127138680_127140256_127141290_127141495_127141609_127141727_127144126_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.106	chr10	-	3433	12	ISM	ENSMUSG00000040354.15	ENSMUST00000145275.8	3065	20	4740	3	2035	-3	intron_retention	FALSE	canonical	3	1496	junction_9	198.842227419024	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCGAGCCCTCTCCTGG	2650	False	NA	-14	True	AATAAA	-19	NA	127142807	127132097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290
ES.3979.108	chr10	-	3255	19	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	35	-3	intron_retention	FALSE	canonical	3	1393	junction_14	180.947779111632	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCGAGCCCTCTCCTGG	NA	False	NA	-14	True	AATAAA	-19	NA	127147512	127132097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.109	chr10	-	5480	19	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	1393	junction_13	181.64723817279	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCGAGCCCTCTCCTGG	NA	False	NA	-14	True	AATAAA	-19	NA	127147565	127132097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.11	chr10	-	3679	13	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_7	35.2132393031687	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124858	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127120644_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.110	chr10	-	7663	18	NNC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-4	intron_retention	FALSE	canonical	0	0	junction_3	437.504080060066	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCGAGCCCTCTCCTG	NA	False	NA	-15	True	AATAAA	-18	NA	127147522	127132098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127133518_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127138756_127140053_127140256_127141290_127141495_127141609_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.111	chr10	-	3291	24	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	-10957	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	610.498293487874	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCGAGCCCTCTCCTG	8381	False	NA	-15	True	AATAAA	-18	NA	127158612	127132098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389_127147556_127147668_127147918_127158089_127158223_127158533
ES.3979.113	chr10	-	3373	19	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	47	-4	intron_retention	FALSE	canonical	3	1393	junction_13	217.013027998292	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCGAGCCCTCTCCTG	NA	False	NA	-15	True	AATAAA	-18	NA	127147500	127132098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.116	chr10	-	5355	19	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	3	-4	intron_retention	FALSE	canonical	3	1496	junction_10	202.591215548167	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCGAGCCCTCTCCTG	NA	False	NA	-15	True	AATAAA	-18	NA	127147544	127132098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.117	chr10	-	4018	19	NNC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-4	intron_retention	FALSE	canonical	0	0	junction_3	426.332844670035	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCGAGCCCTCTCCTG	NA	False	NA	-15	True	AATAAA	-18	NA	127147522	127132098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127133518_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312
ES.3979.118	chr10	-	6065	17	NNC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	14	-5	intron_retention	FALSE	canonical	2	32	junction_14	442.072635257771	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCCGAGCCCTCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	127147533	127132099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146004_127146088_127146168_127146312_127146404_127147389
ES.3979.12	chr10	-	4610	10	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	907	0	intron_retention	FALSE	canonical	2	3	junction_2	38.5066933415318	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127123815	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127119032_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264
ES.3979.120	chr10	-	2789	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	426.484639231004	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGCCGAGCCCTCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	127147526	127132099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141620_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.121	chr10	-	7651	17	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	25	-7	intron_retention	FALSE	canonical	3	1393	junction_11	221.786135373134	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGCCGAGCCCTCTC	NA	False	NA	-18	True	AATAAA	-15	NA	127147522	127132101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127138756_127140053_127140256_127141290_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.124	chr10	-	5252	20	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	-34	-8	intron_retention	FALSE	canonical	3	1393	junction_14	211.760880145769	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAAGCCGAGCCCTCT	NA	False	NA	-19	True	AATAAA	-14	NA	127147581	127132102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.125	chr10	-	5347	20	NIC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	31	-8	intron_retention	FALSE	canonical	3	61	junction_3	489.069385942248	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAAGCCGAGCCCTCT	NA	False	NA	-19	True	AATAAA	-14	NA	127147516	127132102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.127	chr10	-	2780	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	25	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	426.549305473588	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAAGCCGAGCCCTCT	NA	False	NA	-19	True	AATAAA	-14	NA	127147522	127132102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133616_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.128	chr10	-	2680	20	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	31	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	435.456152720143	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAAGCCGAGCCCTCT	NA	False	NA	-19	True	AATAAA	-14	NA	127147516	127132102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.13	chr10	-	4347	12	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	24	0	intron_retention	FALSE	canonical	3	40	junction_4	21.9684221155716	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124863	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.131	chr10	-	2920	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	44	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	410.785987467927	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAAGCCGAGCCCTCT	NA	False	NA	-19	True	AATAAA	-14	NA	127147611	127132102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132348_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.132	chr10	-	2776	19	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	15	-9	intron_retention	FALSE	canonical	0	0	junction_14	446.97123391849	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAAGCCGAGCCCTC	NA	False	NA	-20	True	AATAAA	-13	NA	127147532	127132103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144369_127144549_127144776_127144853_127145872_127146168_127146312_127146404_127147389
ES.3979.133	chr10	-	5670	17	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	33	-9	intron_retention	FALSE	canonical	3	1496	junction_8	176.081124769238	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAAGCCGAGCCCTC	NA	False	NA	-20	True	AATAAA	-13	NA	127147514	127132103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.134	chr10	-	5100	19	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	29	-9	intron_retention	FALSE	canonical	3	1393	junction_14	210.692545585818	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAAGCCGAGCCCTC	NA	False	NA	-20	True	AATAAA	-13	NA	127147518	127132103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146168_127146312_127146404_127147389
ES.3979.135	chr10	-	3795	17	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	-5	-9	intron_retention	FALSE	canonical	3	1496	junction_7	175.835816530649	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAAGCCGAGCCCTC	NA	False	NA	-20	True	AATAAA	-13	NA	127147552	127132103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.136	chr10	-	3142	19	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-9	intron_retention	FALSE	canonical	3	1393	junction_13	181.555462056279	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAAGCCGAGCCCTC	NA	False	NA	-20	True	AATAAA	-13	NA	127147522	127132103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.139	chr10	-	4325	4	Intergenic	novelGene_3056	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCGAGACAGGGTTT	9861	False	NA	3	True	NA	NA	NA	127155824	127150793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127151788_127151882_127152671_127152881_127155334_127155733
ES.3979.14	chr10	-	4090	12	Fusion	ENSMUSG00000092384.8_ENSMUSG00000025409.15	novel	4165	13	NA	NA	140	0	intron_retention	FALSE	canonical	0	0	junction_11	36.3949864860851	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127126453	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123560_127126431
ES.3979.140	chr10	-	135	1	Intergenic	novelGene_3057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGGTG	NA	False	NA	NA	False	NA	NA	NA	127152905	127152770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127152800_127152900
ES.3979.15	chr10	-	3600	7	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-648	0	intron_retention	FALSE	canonical	3	40	junction_4	31.061319282277	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127122417	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400
ES.3979.18	chr10	-	4426	12	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	36	0	intron_retention	FALSE	canonical	3	53	junction_4	22.5311538222521	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124851	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.20	chr10	-	4725	8	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	84	junction_3	11.2340590007643	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124719	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123560_127124577
ES.3979.21	chr10	-	4341	13	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	26	0	intron_retention	FALSE	canonical	2	3	junction_2	35.202095108104	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124861	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127119032_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.22	chr10	-	3254	13	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	9	0	intron_retention	FALSE	non_canonical	0	0	junction_7	33.8266619038231	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124750	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127120904_127121974_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.23	chr10	-	4146	13	NNC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	36.0277670693036	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124728	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120554_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.25	chr10	-	3896	15	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	37.4594338408026	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTGACTCTGTACTCAT	NA	False	NA	-7	True	NA	NA	NA	127124857	127117825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118179_127118283_127118348_127118605_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.26	chr10	-	4292	11	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	16	-1	intron_retention	FALSE	canonical	3	40	junction_3	19.7962117588189	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTGACTCTGTACTCAT	NA	False	NA	-7	True	NA	NA	NA	127124706	127117825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.28	chr10	-	3863	12	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	26	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	42.360710004273	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTGACTCTGTACTCAT	NA	False	NA	-7	True	NA	NA	NA	127124861	127117825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118889_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122192_127122927_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.29	chr10	-	4024	13	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	108	-2	intron_retention	FALSE	canonical	0	0	junction_11	33.4998963514151	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	NA	False	NA	-8	True	NA	NA	NA	127124614	127117826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123483_127123560_127124577
ES.3979.31	chr10	-	4163	12	NNC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	3	junction_11	36.8654018185028	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGACTCTGTACTCA	NA	False	NA	-8	True	NA	NA	NA	127124769	127117826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123462_127124577
ES.3979.32	chr10	-	3734	13	NNC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	128	-5	intron_retention	FALSE	canonical	0	0	junction_8	36.2087888348794	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCTGACTCTGTAC	NA	False	NA	-11	True	NA	NA	NA	127124594	127117829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122181_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.33	chr10	-	4156	14	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	24	-5	intron_retention	FALSE	canonical	3	10	junction_1	31.9515165255739	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTTCTGACTCTGTAC	NA	False	NA	-11	True	NA	NA	NA	127124863	127117829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118179_127118283_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.35	chr10	-	3443	12	Fusion	ENSMUSG00000092384.8_ENSMUSG00000025409.15	novel	4287	13	NA	NA	139	173	multi-exon	FALSE	canonical	0	0	junction_11	34.9883097359935	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCATTGCCTCCCTTCTT	NA	False	NA	1	True	NA	NA	NA	127126454	127118371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123462_127126431
ES.3979.36	chr10	-	3746	13	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	-7	169	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	23.7748408103094	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGACTTCATTGCCTCCCT	NA	False	NA	-3	True	NA	NA	NA	127124894	127118375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.37	chr10	-	3717	12	NNC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	7	167	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_11	34.3301905539581	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGACTTCATTGCCTCC	NA	False	NA	-5	True	NA	NA	NA	127124880	127118377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123462_127124577
ES.3979.38	chr10	-	3612	5	NIC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	-942	167	intron_retention	FALSE	canonical	3	91	junction_4	14.9164338901763	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGACTTCATTGCCTCC	NA	False	NA	-5	True	NA	NA	NA	127122711	127118377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127122442_127122662
ES.3979.4	chr10	-	4352	12	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	24	1	intron_retention	FALSE	canonical	3	53	junction_4	22.5641418154507	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCTGTACTCATTT	NA	False	NA	-5	True	NA	NA	NA	127124863	127117823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123560_127124577
ES.3979.42	chr10	-	3819	12	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	2	166	intron_retention	FALSE	canonical	3	53	junction_4	22.5641418154507	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCGACTTCATTGCCTC	NA	False	NA	-6	True	NA	NA	NA	127124885	127118378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123560_127124577
ES.3979.43	chr10	-	4172	24	Fusion	ENSMUSG00000092384.8_ENSMUSG00000040354.15	novel	2962	22	NA	NA	52	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	679.979872936871	1487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTTTTTTTTGTGCC	NA	False	NA	NA	False	AGTAAA	-23	NA	127147495	127125565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_127125821_127126431_127126530_127126644_127126749_127131155_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146406_127147389
ES.3979.44	chr10	-	3582	1	Antisense	novelGene_ENSMUSG00000116429.2_AS_novelGene_ENSMUSG00000025408.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTATCTTTTGCTCCT	5283	False	NA	NA	False	NA	NA	NA	127131366	127127784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127127800_127131400
ES.3979.45	chr10	-	6442	22	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	42	3749	intron_retention	TRUE	non_canonical	0	0	junction_1	418.075918850754	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGTTTCTATTCTTG	NA	False	NA	NA	False	NA	NA	NA	127147505	127128340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127129426_127129521_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.46	chr10	-	6669	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	16	-3746	16	3746	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCTCCTGTTTCTATTC	NA	False	NA	NA	False	NA	NA	NA	127147639	127128343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.48	chr10	-	6346	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	104	-3511	-4	3511	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGGCTCCAGATATAAA	NA	False	NA	NA	False	NA	NA	NA	127147551	127128578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.49	chr10	-	4962	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	129	-2152	21	2152	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGAACACTACTGGTAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	127147526	127129937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.5	chr10	-	4202	14	Fusion	ENSMUSG00000092384.8_ENSMUSG00000025409.15	novel	4165	13	NA	NA	138	0	intron_retention	FALSE	canonical	1	1	junction_13	40.2947718575655	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127126455	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127125622_127125821_127126431
ES.3979.50	chr10	-	4484	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	128	-1673	20	1673	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGTGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127147527	127130416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.51	chr10	-	4364	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	51	1619	intron_retention	FALSE	canonical	1	3	junction_16	427.815567739184	1481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCAAAGATATATTTATT	NA	False	NA	NA	False	NA	NA	NA	127147496	127130470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144811_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.53	chr10	-	4333	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	128	-1522	20	1522	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTTCCAACTTTTTG	NA	False	NA	NA	False	NA	NA	NA	127147527	127130567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.54	chr10	-	4684	20	FSM	ENSMUSG00000040354.15	ENSMUST00000145275.8	3065	20	-95	-1524	13	1519	multi-exon	FALSE	canonical	3	1393	junction_14	176.876657025606	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACAGCTTTCCAACTTT	NA	False	NA	NA	False	NA	NA	NA	127147642	127130570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.55	chr10	-	3799	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	133	-993	25	993	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTAAGGGCATGGGTTG	NA	False	NA	NA	False	TTTAAA	-19	NA	127147522	127131096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.56	chr10	-	3486	18	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	25	0	intron_retention	FALSE	canonical	3	1393	junction_12	222.169267431397	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	NA	False	NA	-6	True	AATAAA	-27	NA	127147522	127132089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133709_127133790_127133923_127135116_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.58	chr10	-	2859	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	103	0	-5	0	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147552	127132090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.6	chr10	-	4306	13	NIC	ENSMUSG00000025409.15	novel	4287	13	NA	NA	-16	0	intron_retention	FALSE	canonical	3	40	junction_5	24.2206294073645	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124903	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ES.3979.60	chr10	-	3268	20	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	47	0	intron_retention	FALSE	canonical	1	24	junction_19	433.928814515102	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147500	127132090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146402_127147389
ES.3979.61	chr10	-	2741	21	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	427.918856209913	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147489	127132090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127145977_127146088_127146168_127146312_127146404_127147389
ES.3979.62	chr10	-	2830	21	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	407.518278731151	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147526	127132090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132508_127132725_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.64	chr10	-	2291	4	NNC	ENSMUSG00000040354.15	novel	467	4	NA	NA	-1558	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	996.910003739332	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCTCTCCTGGTCTACC	1458	False	NA	-8	True	AATAAA	-25	NA	127135191	127132091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127134597_127134784
ES.3979.66	chr10	-	5579	18	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-1	intron_retention	FALSE	canonical	3	1496	junction_9	171.257207561809	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCTCTCCTGGTCTACC	NA	False	NA	-8	True	AATAAA	-25	NA	127147522	127132091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.7	chr10	-	4298	13	NNC	ENSMUSG00000025409.15	novel	4165	13	NA	NA	189	0	intron_retention	FALSE	canonical	2	5	junction_12	35.3139687501828	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124533	127117824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124218
ES.3979.71	chr10	-	2708	20	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	437.090620496844	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGCCCTCTCCTGGTCTA	NA	False	NA	-10	True	AATAAA	-23	NA	127147545	127132093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.72	chr10	-	3157	20	FSM	ENSMUSG00000040354.15	ENSMUST00000145275.8	3065	20	-92	0	16	0	multi-exon	FALSE	canonical	3	1393	junction_14	176.876657025606	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147639	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.73	chr10	-	5911	16	NNC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_3	463.142147605774	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147522	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127133518_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.76	chr10	-	2665	20	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	439.21815451734	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147588	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.77	chr10	-	4626	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	428.031015231373	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147629	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127142408_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.78	chr10	-	2759	20	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	569.476792481059	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147558	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133518_127133601_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.81	chr10	-	6498	18	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	2	0	intron_retention	FALSE	canonical	3	1393	junction_12	184.616445188152	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147545	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127141495_127141609_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.82	chr10	-	3140	21	NNC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	26	0	intron_retention	FALSE	canonical	1	1	junction_7	535.261394087039	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147521	127132094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135424_127135526_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.84	chr10	-	2920	21	NNC	ENSMUSG00000040354.15	novel	2962	22	NA	NA	25	-2	intron_retention	FALSE	canonical	1	3	junction_16	488.225972271038	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147522	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132585_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144811_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.85	chr10	-	2775	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	427.815567739184	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147533	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144811_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.88	chr10	-	4329	19	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	32	-2	intron_retention	FALSE	canonical	3	1393	junction_13	180.546700637567	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147515	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.89	chr10	-	3854	16	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	25	-2	intron_retention	FALSE	canonical	3	1496	junction_6	179.619028935009	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147522	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133709_127133790_127133923_127135116_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.90	chr10	-	2746	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	552.33921642411	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147493	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144564_127144811_127144853_127145872_127146004_127146088_127146168_127146312_127146404_127147389
ES.3979.95	chr10	-	5310	19	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	1393	junction_13	175.266402166516	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147563	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.97	chr10	-	3727	18	NIC	ENSMUSG00000040354.15	novel	3065	20	NA	NA	42	-2	intron_retention	FALSE	canonical	3	1393	junction_12	186.333313731679	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147613	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ES.3979.98	chr10	-	3006	19	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	35	-2	intron_retention	FALSE	canonical	3	1496	junction_10	202.64223780646	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147512	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144549_127144776_127144853_127145872_127146168_127146312_127146404_127147389
ES.3979.99	chr10	-	2791	21	NNC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	428.184221451468	1479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	False	NA	-13	True	AATAAA	-20	NA	127147522	127132096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145880_127146008_127146088_127146168_127146312_127146404_127147389
ES.398.1	chr1	-	2542	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44186786	44184244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_44184200_44186800
ES.3980.1	chr10	-	172	1	Intergenic	novelGene_3058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATAAATTTAACTTT	5699	False	NA	NA	False	NA	NA	NA	127161294	127161122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127161100_127161300
ES.3981.1	chr10	-	4334	12	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	9	2	intron_retention	FALSE	canonical	2	10	junction_11	7.80972057996892	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTGTCATGTTGGGGA	2747	False	NA	NA	False	AATAAA	-19	NA	127177834	127165748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.10	chr10	-	3770	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	42	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	10.307427203505	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCACCTGTCATGTTG	2780	False	NA	NA	False	AATAAA	-15	NA	127177801	127165752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127166028_127166569_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.11	chr10	-	3478	14	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.94481816244136	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCACCTGTCATGTTG	2773	False	NA	NA	False	AATAAA	-15	NA	127177808	127165752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127166028_127166569_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.12	chr10	-	4305	12	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	-21	-5	intron_retention	FALSE	canonical	0	0	junction_11	9.72344869608795	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	2717	False	NA	NA	False	AATAAA	-12	NA	127177864	127165755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177136_127177427
ES.3981.13	chr10	-	4443	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	5	-5	intron_retention	FALSE	canonical	1	1	junction_10	10.9503297768708	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	2743	False	NA	NA	False	AATAAA	-12	NA	127177838	127165755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127174538_127174651_127177073_127177188_127177427
ES.3981.14	chr10	-	3679	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.2398102000582	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	4751	False	NA	NA	False	AATAAA	-12	NA	127175830	127165755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127174538_127174651_127175785
ES.3981.15	chr10	-	3521	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	185	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	9.97879696601193	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	3011	False	NA	NA	False	AATAAA	-12	NA	127177570	127165755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127166028_127166569_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.16	chr10	-	3022	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.2398102000582	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATCACCTGTCATG	4754	False	NA	NA	False	AATAAA	-12	NA	127175827	127165755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127166028_127166569_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127175785
ES.3981.18	chr10	-	3227	11	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	417	-849	intron_retention	FALSE	canonical	3	14	junction_10	6.76830850360709	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTCCTCCTCTCATTC	3243	False	NA	NA	False	NA	NA	NA	127177338	127166599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073
ES.3981.2	chr10	-	3871	11	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	0	2	intron_retention	FALSE	canonical	1	1	junction_10	10.0419121685066	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTGTCATGTTGGGGA	4753	False	NA	NA	False	AATAAA	-19	NA	127175828	127165748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127175785
ES.3981.3	chr10	-	4050	13	FSM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	9	-2	9	2	multi-exon	FALSE	canonical	2	10	junction_12	8.16964231503164	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTGTCATGTTGGGGA	2747	False	NA	NA	False	AATAAA	-19	NA	127177834	127165748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.4	chr10	-	4610	11	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	31	1	intron_retention	FALSE	canonical	2	10	junction_10	7.95298686029343	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCACCTGTCATGTTGGGG	2769	False	NA	NA	False	AATAAA	-18	NA	127177812	127165749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.5	chr10	-	4570	11	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	5	0	intron_retention	TRUE	non_canonical	0	0	junction_1	10.6869078783341	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	2743	False	NA	NA	False	AATAAA	-17	NA	127177838	127165750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127166028_127166569_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127173027_127173258_127174034_127174289_127174416_127177073_127177188_127177427
ES.3981.6	chr10	-	4160	14	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	10.7955721802147	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	2747	False	NA	NA	False	AATAAA	-17	NA	127177834	127165750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127174538_127174651_127177073_127177188_127177427
ES.3981.7	chr10	-	3966	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	406	0	intron_retention	FALSE	canonical	0	0	junction_12	12.277746354912	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	3232	False	NA	NA	False	AATAAA	-17	NA	127177349	127165750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173464_127173940_127174034_127174289_127174416_127174538_127174651_127177073_127177136_127177316
ES.3981.8	chr10	-	3667	13	NNC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	413	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	9.79335091897672	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	3239	False	NA	NA	False	AATAAA	-17	NA	127177342	127165750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177316
ES.3981.9	chr10	-	5311	9	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	36	-2	intron_retention	FALSE	canonical	2	10	junction_8	8.75981592272349	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCACCTGTCATGTTG	2774	False	NA	NA	False	AATAAA	-15	NA	127177807	127165752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127174034_127174289_127174416_127177073_127177188_127177427
ES.3982.1	chr10	-	2877	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2441	1	2441	-1	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTGTGTGTTCTT	7887	False	NA	NA	False	NA	NA	NA	127187839	127184726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127186881_127187116
ES.3982.2	chr10	-	1518	2	NNC	ENSMUSG00000047492.6	novel	5319	2	NA	NA	2393	-796	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACCAGAGAATTGTG	7839	False	NA	NA	False	AATAAA	-11	NA	127187887	127185521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127186881_127187728
ES.3982.3	chr10	-	1988	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2519	812	2519	-812	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGGAGAAAGAAAA	7965	False	NA	NA	False	NA	NA	NA	127187761	127185537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127186881_127187116
ES.3983.1	chr10	-	160	1	Intergenic	novelGene_3059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127201231	127201071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127201100_127201200
ES.3984.1	chr10	-	1211	1	Intergenic	novelGene_3060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACTCAGTTTTCAGCAG	NA	False	NA	NA	False	NA	NA	NA	127219603	127218392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127218400_127219600
ES.3985.1	chr10	-	2206	1	Intergenic	novelGene_3061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTACCCCTCCTTAA	2107	False	NA	NA	False	AAAAAG	-9	NA	127228647	127226441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127226400_127228600
ES.3986.1	chr10	-	180	1	Intergenic	novelGene_3062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	8534	False	NA	NA	False	NA	NA	NA	127274040	127273860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127273900_127274000
ES.3987.1	chr10	-	2002	14	Antisense	novelGene_ENSMUSG00000025404.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAGTAAAATTTCCA	7690	False	NA	NA	False	NA	NA	NA	127334280	127297929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127298151_127300848_127300880_127307633_127307868_127312386_127312566_127319842_127320086_127320372_127320499_127320725_127320889_127321281_127321438_127323641_127323741_127328433_127328606_127330887_127331037_127333029_127333135_127333413_127333494_127334236
ES.3987.2	chr10	-	5415	2	Antisense	novelGene_ENSMUSG00000025404.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAAGTAAAATTTCCA	1653	False	NA	NA	False	NA	NA	NA	127310098	127297929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127300880_127307633
ES.3988.1	chr10	-	175	1	Intergenic	novelGene_3065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATTATATCCCAGTG	9176	False	NA	NA	False	NA	NA	NA	127342636	127342461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127342500_127342600
ES.3989.1	chr10	+	1055	2	NIC	ENSMUSG00000040287.10	novel	1581	12	NA	NA	377	2	intron_retention	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGTTCTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	127343470	127344686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127344088_127344248
ES.399.1	chr1	+	4033	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.3661202582887	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTTTTACTATCCA	NA	False	NA	86	True	ATTAAA	-32	NA	44186875	44220412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.10	chr1	+	3449	14	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	7	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	45.3492691563795	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATGTATAGTTTT	NA	False	NA	3	True	ATTAAA	-18	NA	44187075	44220329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187126_44196096_44196273_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.12	chr1	+	3695	14	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.5658585252161	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTTTTACTATCCA	NA	False	NA	86	True	ATTAAA	-32	NA	44187075	44220412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.13	chr1	+	3776	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-5	-96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.4424319986713	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTATTTTGAATGTATA	NA	False	NA	-2	True	ATTAAA	-13	NA	44187086	44220324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213279_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.14	chr1	+	3816	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-5	-90	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	33.1326954865444	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAATGTATAGTTTTA	NA	False	NA	4	True	ATTAAA	-19	NA	44187086	44220330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.15	chr1	+	773	5	ISM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	88	20106	3	-690	5prime_fragment	FALSE	canonical	0	0	junction_3	40.0398239256868	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGTGTTTCTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	44187094	44200314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136
ES.399.17	chr1	+	3649	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	13	-95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	47.5854226521063	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTATTTTGAATGTATAG	NA	False	NA	-1	True	ATTAAA	-14	NA	44187104	44220325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187298_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44206023_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.18	chr1	+	3990	16	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	13	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.8698434200737	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACATAAAAGTACATCT	NA	False	NA	73	True	ATTAAA	-19	NA	44187104	44220399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187298_44195329_44195542_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.19	chr1	+	4264	14	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	15	-91	intron_retention	FALSE	non_canonical	0	0	junction_12	31.0536851427773	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATGTATAGTTTT	NA	False	NA	3	True	ATTAAA	-18	NA	44187106	44220329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.2	chr1	+	3909	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-18	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	39.7549252499945	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACATCTGTTTTACT	NA	False	NA	81	True	ATTAAA	-27	NA	44186885	44220407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187126_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.20	chr1	+	6057	12	NNC	ENSMUSG00000026048.17	novel	4239	14	NA	NA	15	-93	intron_retention	FALSE	non_canonical	0	0	junction_10	31.2856738528955	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGAATGTATAGTT	NA	False	NA	1	True	ATTAAA	-16	NA	44187106	44220327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196096_44196273_44197303_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44213192_44213321_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.22	chr1	+	7600	15	NNC	ENSMUSG00000026048.17	novel	1060	7	NA	NA	-4163	-90	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.3447187569462	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAATGTATAGTTTTA	NA	False	NA	4	True	ATTAAA	-19	NA	44191931	44220330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44193850_44193930_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.23	chr1	+	9543	1	NIC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-1741	-2262	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	44194353	44203896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44194400_44203900
ES.399.24	chr1	+	4432	8	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	5166	-13	intron_retention	FALSE	non_canonical	0	0	junction_4	48.8228785446716	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACATCTGTTTTACT	NA	False	NA	81	True	ATTAAA	-27	NA	44203155	44220407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44203245_44205968_44207043_44212497_44212740_44213071_44214664_44214714_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.25	chr1	+	2906	6	NNC	ENSMUSG00000026048.17	novel	4239	14	NA	NA	15065	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56.4637937088892	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACATAAAAGTACATCT	1328	False	NA	73	True	ATTAAA	-19	NA	44213054	44220399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44213192_44213321_44214664_44214714_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.3	chr1	+	3685	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-30	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.8369544041163	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTTTTACTATCCA	NA	False	NA	86	True	ATTAAA	-32	NA	44187038	44220412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187126_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.4	chr1	+	3653	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-29	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.3447187569462	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTTGAATGTATAGTT	NA	False	NA	1	True	ATTAAA	-16	NA	44187039	44220327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187126_44196042_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.5	chr1	+	3691	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-23	-91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.4146429680821	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATGTATAGTTTT	NA	False	NA	3	True	ATTAAA	-18	NA	44187045	44220329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187150_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212501_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.6	chr1	+	4311	14	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	-18	-89	intron_retention	FALSE	non_canonical	0	0	junction_1	45.752485624591	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATGTATAGTTTTAT	NA	False	NA	5	True	ATTAAA	-20	NA	44187050	44220331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187311_44196103_44196273_44197303_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212501_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.399.9	chr1	+	3820	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.589984339225	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTGTTTTACTATCCA	NA	False	NA	86	True	ATTAAA	-32	NA	44187075	44220412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44187298_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ES.3990.1	chr10	+	975	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	-43	2	-43	-2	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTGCGCCTGCTAAT	NA	False	NA	NA	False	AATACA	-19	NA	127350792	127353021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
ES.3990.2	chr10	+	2081	2	NIC	ENSMUSG00000040280.11	novel	934	4	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	101	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTGCGCCTGCTAAT	NA	False	NA	NA	False	AATACA	-19	NA	127350823	127353021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127352195_127352311
ES.3991.1	chr10	-	2609	11	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	-3	5	intron_retention	FALSE	canonical	2	66	junction_5	694.478250199385	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTTTGATCCCCAG	NA	False	NA	0	True	AATGAA	-20	NA	127358236	127352986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354712_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356976_127358156
ES.3991.10	chr10	-	2256	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-18	0	-2	0	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358273	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.100	chr10	-	1874	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	12	117	intron_retention	FALSE	canonical	3	222	junction_8	688.955408974743	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGATTTCTGATCTTT	NA	False	NA	-5	True	CATAAA	-19	NA	127358301	127353484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356786_127356976_127358156
ES.3991.103	chr10	-	2252	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	115	intron_retention	FALSE	canonical	3	1501	junction_10	185.395927679116	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGAGATTTCTGATCT	NA	False	NA	-7	True	CATAAA	-17	NA	127358255	127353486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356985_127358156
ES.3991.105	chr10	-	3779	8	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	112	intron_retention	TRUE	non_canonical	0	0	junction_4	712.695658777866	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358265	127353489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354822_127354985_127355130_127355257_127355381_127355498_127356041_127356206
ES.3991.106	chr10	-	3688	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	22	112	intron_retention	FALSE	canonical	3	1924	junction_2	88.2184209557072	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGCTGAGATTTCTGA	NA	False	NA	-10	True	CATAAA	-14	NA	127358211	127353489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.107	chr10	-	3001	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	110	intron_retention	FALSE	canonical	3	222	junction_8	611.548853322447	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGCTGAGATTTCT	NA	False	NA	-12	True	CATAAA	-12	NA	127358254	127353491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356786
ES.3991.108	chr10	-	1779	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	110	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	613.474041830622	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGCTGAGATTTCT	NA	False	NA	-12	True	CATAAA	-12	NA	127358270	127353491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356532_127358186
ES.3991.109	chr10	-	3645	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-5	110	intron_retention	FALSE	canonical	3	1924	junction_2	89.3139651734263	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGCTGAGATTTCT	NA	False	NA	-12	True	CATAAA	-12	NA	127358318	127353491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.11	chr10	-	2784	11	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	625	junction_10	436.173233933491	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358301	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356976_127358156
ES.3991.110	chr10	-	1707	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	6	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	593.719721281024	1276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGCTGAGATTTCT	NA	False	NA	-12	True	CATAAA	-12	NA	127358307	127353491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355931_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.113	chr10	-	2030	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	110	intron_retention	FALSE	canonical	0	0	junction_9	645.345557735458	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGCTGAGATTTCT	NA	False	NA	-12	True	CATAAA	-12	NA	127358270	127353491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356532_127358156
ES.3991.114	chr10	-	3943	6	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	262	109	intron_retention	FALSE	canonical	3	1924	junction_2	52.0407532612663	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTAGCTGAGATTTC	NA	False	NA	-13	True	CATAAA	-11	NA	127357971	127353492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498
ES.3991.115	chr10	-	2721	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	108	intron_retention	FALSE	canonical	3	1501	junction_7	211.325360908873	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGTAGCTGAGATTT	NA	False	NA	-14	True	CATAAA	-10	NA	127358254	127353493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356985_127358156
ES.3991.12	chr10	-	1955	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	560.229733383249	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358269	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353092_127353397_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.13	chr10	-	1995	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	649.564357216948	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358318	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353092_127353397_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.14	chr10	-	2630	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1501	junction_9	180.511003050291	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358254	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.15	chr10	-	2159	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	577.640332877359	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358254	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354712_127354798_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.16	chr10	-	1831	11	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	2	0	intron_retention	FALSE	canonical	2	21	junction_10	809.938053186785	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358253	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353092_127353397_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127358156
ES.3991.17	chr10	-	2278	11	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	613.474041830622	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358269	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356532_127358186
ES.3991.18	chr10	-	2227	11	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	66	junction_4	696.891498010989	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358269	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354712_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.19	chr10	-	2904	7	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_6	756.89000008074	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358255	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127355130_127355257_127355381_127355498_127355581_127355839_127356532_127358186
ES.3991.2	chr10	-	2314	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	-5	-20	-5	4	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGTTTGATCCCCA	NA	False	NA	-1	True	AATGAA	-19	NA	127358318	127352987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.21	chr10	-	3556	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	11	0	intron_retention	FALSE	canonical	3	1924	junction_2	86.1215047490864	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358302	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ES.3991.22	chr10	-	2168	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	594.982519362634	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTTCTGTTTGAT	NA	False	NA	-6	True	AATGAA	-14	NA	127358252	127352992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358231
ES.3991.24	chr10	-	2912	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	1501	junction_9	194.879703318309	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGGCTGCTTCTGTTTG	NA	False	NA	-8	True	AATGAA	-12	NA	127358257	127352994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356985_127358156
ES.3991.25	chr10	-	4075	9	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	2	-5	intron_retention	FALSE	canonical	3	1924	junction_2	89.3139651734263	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCACGGCTGCTTCTGTT	NA	False	NA	-10	True	AATGAA	-10	NA	127358253	127352996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.26	chr10	-	3920	10	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-14	13	1	3	intron_retention	FALSE	canonical	3	1924	junction_2	88.7669997629388	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTTTGCCCACGGCTG	NA	False	NA	-18	True	AATGAA	-2	NA	127358269	127353004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.27	chr10	-	2135	12	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	821.103581108432	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATTTTGCCCACGG	NA	False	NA	-21	True	NA	NA	NA	127358255	127353007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354712_127354989_127355158_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.28	chr10	-	3359	11	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	2	-2	intron_retention	FALSE	canonical	1	2	junction_1	620.60667092773	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGTATTTTGCCCAC	NA	False	NA	-23	True	NA	NA	NA	127358253	127353009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353092_127353631_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.29	chr10	-	2169	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	1	119	1	-119	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTATCTCTCCTTCCC	NA	False	NA	0	True	NA	NA	NA	127358312	127353126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.3	chr10	-	3433	11	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-14	0	1	0	intron_retention	FALSE	canonical	3	1924	junction_2	84.2508753663723	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358269	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ES.3991.30	chr10	-	2256	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-122	intron_retention	FALSE	canonical	3	1501	junction_10	185.884614747967	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACGTGTATCTCTCCTT	NA	False	NA	-3	True	NA	NA	NA	127358312	127353129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.31	chr10	-	2156	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-62	144	-4	-128	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCTCAACGTGTATCT	NA	False	NA	-9	True	NA	NA	NA	127358317	127353135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.33	chr10	-	1827	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-3	-177	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	790.729589651619	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358274	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356786_127356985_127358156
ES.3991.35	chr10	-	2143	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	789.349423510713	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358265	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355253_127355381_127355498_127355581_127355839_127356116_127356206_127356287_127356786_127356985_127358156
ES.3991.36	chr10	-	2144	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-177	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	600.008154214563	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358270	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356711_127356985_127358156
ES.3991.37	chr10	-	1979	12	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	454	-177	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_11	783.505620816622	1278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127357779	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354822_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127357741
ES.3991.38	chr10	-	2645	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	5	-177	intron_retention	FALSE	canonical	3	625	junction_9	458.90473472776	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358265	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356976_127358156
ES.3991.39	chr10	-	2117	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	12	-177	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	613.474041830622	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358301	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356532_127358186
ES.3991.4	chr10	-	4186	9	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	12	0	intron_retention	FALSE	canonical	3	1924	junction_2	84.5528680767246	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358301	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.40	chr10	-	4037	8	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	-177	intron_retention	FALSE	canonical	3	1924	junction_2	88.2184209557072	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127358255	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.42	chr10	-	1935	6	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	-1149	-177	intron_retention	FALSE	canonical	1	27	junction_5	803.478089309223	1278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTCCTATTACTGTGG	NA	False	NA	-5	True	AATAAA	-14	NA	127355798	127353184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354822_127354989
ES.3991.43	chr10	-	2535	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-5	-178	intron_retention	FALSE	canonical	3	1501	junction_8	198.331123061914	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358318	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127354002_127354093_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.44	chr10	-	5134	1	Genic_Genomic	ENSMUSG00000025403.6	novel	NA	NA	NA	NA	-6	-178	mono-exon	FALSE	NA	NA	NA	NA	NA	1279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358319	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_127353200_127358300
ES.3991.45	chr10	-	2599	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	12	-178	intron_retention	FALSE	canonical	3	1501	junction_10	185.395927679116	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358301	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356985_127358156
ES.3991.47	chr10	-	2226	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-178	intron_retention	FALSE	canonical	3	1501	junction_10	180.835311817134	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358265	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.48	chr10	-	2049	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	7	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	596.869713208381	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358263	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354822_127354996_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.5	chr10	-	3638	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	1924	junction_2	79.7342809308239	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358253	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ES.3991.50	chr10	-	2009	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	6	-178	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	598.882292274534	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358307	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354154_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.51	chr10	-	3777	10	ISM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	6	178	6	-178	intron_retention	FALSE	canonical	3	1924	junction_2	88.7669997629388	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358307	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.52	chr10	-	2986	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	1501	junction_7	214.743510985091	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358269	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127355130_127355257_127355381_127355498_127355581_127355839_127356985_127358156
ES.3991.53	chr10	-	3905	9	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-14	194	1	-178	intron_retention	FALSE	canonical	3	1924	junction_2	86.9107839971542	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358269	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.54	chr10	-	4383	6	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	intron_retention	FALSE	canonical	3	1989	junction_2	72.9098072964125	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358271	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354250_127354339_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.55	chr10	-	4468	6	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-178	intron_retention	FALSE	canonical	3	1924	junction_2	55.8232926295108	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358265	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127355130_127355257_127355381_127355498_127356041_127356206
ES.3991.56	chr10	-	1854	11	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	-178	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	614.959876739938	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127358156
ES.3991.57	chr10	-	3271	11	ISM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	12	178	12	-178	intron_retention	FALSE	canonical	3	1924	junction_2	84.2508753663723	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358301	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ES.3991.59	chr10	-	2015	13	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	578.432940509673	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358265	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356880_127356927_127356985_127358156
ES.3991.6	chr10	-	4560	7	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	1924	junction_2	51.0848966590583	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358253	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498_127356041_127356206
ES.3991.61	chr10	-	4215	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-178	intron_retention	FALSE	canonical	3	1924	junction_2	66.5999325856128	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358265	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127356041_127356206
ES.3991.64	chr10	-	3543	10	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	301	-178	intron_retention	FALSE	canonical	0	0	junction_4	645.345557735458	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127357932	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354581_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.65	chr10	-	4201	7	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	1924	junction_2	86.6865361838593	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.66	chr10	-	4111	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	1924	junction_2	83.9793463432819	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.67	chr10	-	4235	7	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	2	-178	intron_retention	FALSE	canonical	3	1924	junction_2	79.4049046903835	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358253	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127355130_127355257_127355381_127355498_127356041_127356206
ES.3991.68	chr10	-	4135	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-10	-178	intron_retention	FALSE	canonical	3	1924	junction_2	82.1633514806365	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358281	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.69	chr10	-	2650	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-7	-178	intron_retention	FALSE	canonical	3	1501	junction_9	195.406698395367	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358262	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356985_127358156
ES.3991.7	chr10	-	4701	5	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	1924	junction_2	96.454652557562	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358269	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127355381_127355498_127355581_127355839
ES.3991.70	chr10	-	2485	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	625	junction_9	446.484788841307	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358312	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.73	chr10	-	4534	6	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	0	-178	intron_retention	FALSE	canonical	3	1924	junction_2	52.0407532612663	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498
ES.3991.74	chr10	-	2718	10	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	7	-178	intron_retention	FALSE	canonical	3	625	junction_9	459.48153820433	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358263	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356976_127358156
ES.3991.76	chr10	-	3991	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-178	intron_retention	FALSE	canonical	3	1924	junction_2	87.8825747163538	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358265	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.77	chr10	-	2776	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-2	-178	intron_retention	FALSE	canonical	3	1501	junction_9	186.572264488973	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358257	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356985_127358156
ES.3991.78	chr10	-	2718	10	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	1501	junction_9	194.879703318309	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356985_127358156
ES.3991.79	chr10	-	2527	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	intron_retention	FALSE	canonical	3	1501	junction_8	191.30391396937	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358255	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.8	chr10	-	2178	12	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_11	591.279715937676	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127357780	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127357741
ES.3991.80	chr10	-	1994	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	425	-178	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	593.843149283052	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127357808	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127357768
ES.3991.81	chr10	-	3183	7	NIC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	-178	intron_retention	FALSE	canonical	3	625	junction_6	535.453286685423	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358254	127353185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127355130_127355257_127355381_127355498_127355581_127355839_127356976_127358156
ES.3991.82	chr10	-	1982	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	5	-179	combination_of_known_splicesites	FALSE	canonical	3	222	junction_9	564.846492420728	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGTTCCTATTACTGT	NA	False	NA	-7	True	AATAAA	-12	NA	127358265	127353186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356786_127356985_127358156
ES.3991.83	chr10	-	2034	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	594.982519362634	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGTTCCTATTACTGT	NA	False	NA	-7	True	AATAAA	-12	NA	127358254	127353186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358173
ES.3991.85	chr10	-	3811	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	2	-180	intron_retention	FALSE	canonical	3	1924	junction_2	91.1824236078423	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGTTCCTATTACTG	NA	False	NA	-8	True	AATAAA	-11	NA	127358253	127353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.89	chr10	-	2104	12	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	600.557619671464	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGTTCCTATTACTG	NA	False	NA	-8	True	AATAAA	-11	NA	127358269	127353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356747_127356985_127358156
ES.3991.9	chr10	-	1697	13	NNC	ENSMUSG00000025403.6	novel	2238	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	664.255201125458	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358254	127352991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353092_127353631_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.90	chr10	-	3733	9	NNC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-7	-180	intron_retention	FALSE	canonical	0	0	junction_5	874.975490728169	1279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGTTCCTATTACTG	NA	False	NA	-8	True	AATAAA	-11	NA	127358262	127353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354712_127354989_127355158_127355257_127355381_127355498_127355581_127355839_127356041_127356206
ES.3991.91	chr10	-	4287	7	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	1	-180	intron_retention	FALSE	canonical	3	1924	junction_2	83.2986594529988	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGTTCCTATTACTG	NA	False	NA	-8	True	AATAAA	-11	NA	127358269	127353187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.94	chr10	-	3717	8	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	-9	165	intron_retention	FALSE	canonical	3	1924	junction_2	87.8825747163538	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCGACTTGTTTTTGAG	NA	False	NA	43	True	NA	NA	NA	127358242	127353436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839
ES.3991.95	chr10	-	1845	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	6	438	6	156	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTTGACATCCGACTT	NA	False	NA	34	True	NA	NA	NA	127358307	127353445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ES.3991.97	chr10	-	1760	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-15	493	0	117	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGATTTCTGATCTTT	NA	False	NA	-5	True	CATAAA	-19	NA	127358270	127353484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ES.3991.98	chr10	-	2978	11	ISM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	6	477	6	117	intron_retention	FALSE	canonical	3	1924	junction_2	84.2508753663723	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGATTTCTGATCTTT	NA	False	NA	-5	True	CATAAA	-19	NA	127358307	127353484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786
ES.3991.99	chr10	-	2725	9	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	12	117	intron_retention	FALSE	canonical	3	1501	junction_8	194.321857687189	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGATTTCTGATCTTT	NA	False	NA	-5	True	CATAAA	-19	NA	127358301	127353484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127356985_127358156
ES.3992.1	chr10	-	1393	1	Genic_Genomic	ENSMUSG00000040258.7	novel	NA	NA	NA	NA	7699	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGTGTTAAGACCTTT	7826	False	NA	NA	False	AATAAA	-15	NA	127362729	127361336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_127361300_127362700
ES.3993.1	chr10	+	178	1	Intergenic	novelGene_3068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTGCTTATAAAATATA	NA	False	NA	NA	False	NA	NA	NA	127446842	127447020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127446800_127447000
ES.3994.1	chr10	-	4195	11	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-1440	618	intron_retention	FALSE	canonical	3	50	junction_5	5.93380147965872	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAACAACAACAG	NA	False	NA	NA	False	NA	NA	NA	127380517	127373411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127379135_127380287
ES.3994.10	chr10	-	6594	42	NNC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-8251	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	15.1725745880906	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTGTCTGCATGCTA	NA	False	NA	NA	False	AATAAA	-43	NA	127394037	127374025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389571_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942
ES.3994.11	chr10	-	4968	12	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-2915	0	intron_retention	FALSE	canonical	3	36	junction_10	8.75185930658817	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCACTGTGTCTGCAT	NA	False	NA	NA	False	AATAAA	-39	NA	127381992	127374029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127379135_127380287_127381524_127381599_127381735_127381868
ES.3994.14	chr10	-	5048	29	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-3564	-33	intron_retention	FALSE	canonical	3	26	junction_27	10.4731800328267	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127389350	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235
ES.3994.15	chr10	-	4072	17	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	3007	-33	intron_retention	FALSE	canonical	3	36	junction_13	8.55108728466737	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127382779	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705
ES.3994.16	chr10	-	6706	40	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-7612	-33	intron_retention	FALSE	canonical	3	22	junction_38	13.3403827518483	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127393398	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280
ES.3994.17	chr10	-	14864	89	FSM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	-9	33	-9	-33	multi-exon	TRUE	canonical	1	1	junction_84	18.7170060946926	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127457026	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942_127394057_127394404_127394525_127394699_127394829_127394965_127395092_127395836_127396030_127396323_127396529_127399472_127399663_127402325_127402704_127403016_127403142_127403230_127403383_127404221_127404349_127404457_127404588_127404767_127404903_127405152_127405285_127407274_127407410_127407757_127407899_127408285_127408436_127408617_127408713_127408796_127408972_127409148_127409377_127409840_127409973_127410135_127410381_127410822_127410988_127411152_127411358_127412308_127412507_127412678_127412925_127413856_127414058_127414400_127414584_127417590_127417759_127419249_127419331_127419690_127419808_127420181_127420308_127420481_127420623_127423937_127424064_127424277_127424480_127425423_127425647_127426425_127426607_127427770_127428008_127429221_127429366_127429648_127429839_127430817_127431041_127431153_127431317_127441277_127441542_127441654_127441784_127443814_127443935_127446211_127446350_127448525_127448649_127456486
ES.3994.2	chr10	-	6122	34	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-6002	4	intron_retention	FALSE	canonical	3	25	junction_33	11.5613904178097	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTGTCTGCATGCTA	NA	False	NA	NA	False	AATAAA	-43	NA	127391788	127374025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522
ES.3994.20	chr10	-	4903	31	NNC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-6109	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	14.066706161082	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127391895	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127389389_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859
ES.3994.21	chr10	-	7062	46	NNC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-10560	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	16.6265591490183	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-6	NA	127396346	127374062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392472_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942_127394057_127394404_127394525_127394699_127394829_127394965_127395092_127395836_127396030_127396323
ES.3994.24	chr10	-	4851	24	NIC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-1848	-212	intron_retention	FALSE	canonical	3	32	junction_22	10.6136837881046	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGCGAGCAAGCACAGT	NA	False	NA	NA	False	AATGAA	-25	NA	127387634	127374679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127385303_127385776_127386177_127386475_127386596_127386813_127386931_127387537
ES.3994.27	chr10	-	6884	48	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	57398	656	-13833	-218	3prime_fragment	FALSE	canonical	2	17	junction_47	14.4329360274379	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAGCAAGCGAGCAAG	NA	False	NA	NA	False	AATGAA	-19	NA	127399619	127374685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942_127394057_127394404_127394525_127394699_127394829_127394965_127395092_127395836_127396030_127396323_127396529_127399472
ES.3994.28	chr10	-	3414	21	NNC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	-5059	-1619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	12.0726964676496	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTTTTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	127390845	127379683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382820_127384179_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816
ES.3994.29	chr10	-	158	1	Intergenic	novelGene_3066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	127406803	127406645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127406600_127406800
ES.3994.30	chr10	-	3724	20	ISM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	31370	33940	-6318	6228	internal_fragment	FALSE	canonical	2	7	junction_17	4.16754376733245	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTATATTTAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	127425647	127407969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127408436_127408617_127408713_127408796_127408972_127409148_127409377_127409840_127409973_127410135_127410381_127410822_127410988_127411152_127411358_127412308_127412507_127412678_127412925_127413856_127414058_127414400_127414584_127417590_127417759_127419249_127419331_127419690_127419808_127420181_127420308_127420481_127420623_127423937_127424064_127424277_127424480_127425423
ES.3994.31	chr10	-	1572	1	Intergenic	novelGene_3067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAAACAAACAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	127422897	127421325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127421300_127422900
ES.3994.32	chr10	-	1191	4	NNC	ENSMUSG00000040249.16	novel	2887	13	NA	NA	-9650	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTCTCCTACTCCC	NA	False	NA	NA	False	AATAAA	-19	NA	127428979	127425025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127425647_127426425_127426607_127427770_127428008_127428827
ES.3994.33	chr10	-	2629	13	FSM	ENSMUSG00000040249.16	ENSMUST00000121829.8	2887	13	251	7	203	-7	multi-exon	FALSE	canonical	1	1	junction_8	2.95334085777823	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCATCTTGTGTCTCCT	NA	False	NA	NA	False	AATAAA	-13	NA	127456588	127425031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127425647_127426425_127426607_127427770_127428008_127429221_127429366_127429648_127429839_127430817_127431041_127431153_127431317_127441277_127441542_127441654_127441784_127443814_127443935_127446211_127446350_127448525_127448649_127456486
ES.3994.8	chr10	-	10783	67	NNC	ENSMUSG00000040249.16	novel	14888	89	NA	NA	4841	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	17.7618673064293	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTGTCTGCATGCTA	NA	False	NA	NA	False	AATAAA	-43	NA	127412913	127374025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127379044_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942_127394057_127394404_127394525_127394699_127394829_127394965_127395092_127395836_127396030_127396323_127396529_127399472_127399663_127402325_127402704_127403016_127403142_127403230_127403383_127404221_127404349_127404457_127404588_127404767_127404903_127405152_127405285_127407274_127407412_127407757_127407899_127408285_127408436_127408617_127408713_127408796_127408972_127409148_127409377_127409840_127409973_127410135_127410381_127410822_127410988_127411152_127411358_127412308_127412507_127412678
ES.3995.1	chr10	+	266	1	Intergenic	novelGene_3069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTCCTCCTCCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	127465550	127465816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127465600_127465800
ES.3995.2	chr10	+	162	1	Intergenic	novelGene_3070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127465551	127465713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127465600_127465700
ES.3996.1	chr10	+	249	1	Intergenic	novelGene_3071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATACAAACAGAAAACGG	2547	False	NA	NA	False	NA	NA	NA	127474379	127474628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127474400_127474600
ES.3997.1	chr10	+	3636	22	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	-1026	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.6084769824104	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGACACGCTAAGT	1245	False	NA	19	True	AATAAA	-22	NA	127477828	127496851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127477929_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.10	chr10	+	3514	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	33	228	17	-228	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTTCCAGTGTTTCCT	2304	False	NA	NA	False	CATAAA	-19	NA	127478887	127496598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.11	chr10	+	3727	22	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.620960072763	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	2304	False	NA	-2	True	AATAAA	-26	NA	127478887	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495568_127495663
ES.3997.12	chr10	+	4129	22	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	23	33	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	75.1502199301875	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACGCTAAGTGTTCGACA	2310	False	NA	27	True	AATAAA	-30	NA	127478893	127496859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487849_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493707_127493809_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.13	chr10	+	3601	21	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	40	-13	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	67.8101024921803	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAATAACAAAATAAATAA	2327	False	NA	-19	True	AATAAA	-9	NA	127478910	127496813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.14	chr10	+	2820	22	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	89	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	73.1792444212084	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTATGGAACTGCT	2376	False	NA	NA	False	NA	NA	NA	127478959	127495978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488247_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.15	chr10	+	6719	19	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	95	-12	intron_retention	FALSE	non_canonical	0	0	junction_15	60.8086454217218	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	2382	False	NA	-18	True	AATAAA	-10	NA	127478965	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493705_127493804_127494130_127494225_127494331_127494497_127494570_127495301
ES.3997.17	chr10	+	2062	13	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	118	5071	102	871	5prime_fragment	FALSE	canonical	3	34	junction_1	7.01585505994973	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAATAAAC	2389	False	NA	NA	False	NA	NA	NA	127478972	127491755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165
ES.3997.18	chr10	+	3560	21	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	123	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	74.9136002338694	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	2410	False	NA	-18	True	AATAAA	-10	NA	127478993	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.19	chr10	+	3697	21	ISM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	143	12	127	-12	intron_retention	FALSE	canonical	3	34	junction_1	63.9186005791741	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	2414	False	NA	-18	True	AATAAA	-10	NA	127478997	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457
ES.3997.2	chr10	+	4726	18	NNC	ENSMUSG00000002147.19	novel	698	2	NA	NA	-438	4	intron_retention	FALSE	canonical	0	0	junction_1	79.2992230857713	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1833	False	NA	-2	True	AATAAA	-26	NA	127478416	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127478456_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127491373_127492792_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.20	chr10	+	4255	18	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	146	-232	intron_retention	FALSE	non_canonical	0	0	junction_14	72.6896041171831	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATGCTTCCAGTGTT	2433	False	NA	NA	False	CATAAA	-15	NA	127479016	127496594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127489199_127490794_127490888_127491165_127491373_127492792_127493114_127493424_127493675_127493780_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.21	chr10	+	3784	21	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	1079	4	intron_retention	TRUE	non_canonical	0	0	junction_20	59.2736028936997	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	3366	False	NA	-2	True	AATAAA	-26	NA	127479949	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127480138_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495453
ES.3997.22	chr10	+	3014	11	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-3	-12	intron_retention	FALSE	canonical	3	49	junction_2	86.9330777092356	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	1123	False	NA	-18	True	AATAAA	-10	NA	127488944	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.23	chr10	+	3730	10	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	400	4	intron_retention	TRUE	non_canonical	0	0	junction_6	95.7695278736186	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1526	False	NA	-2	True	AATAAA	-26	NA	127489347	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127490149_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493692_127493801_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.24	chr10	+	3572	9	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	401	17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	94.3205140730266	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCTGAAAAGAAAGACA	1527	False	NA	11	True	AATAAA	-39	NA	127489348	127496843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.25	chr10	+	3092	13	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	402	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.6328346657948	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	1528	False	NA	-18	True	AATAAA	-10	NA	127489349	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127490149_127490354_127490382_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.26	chr10	+	3040	12	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	404	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.7237897245442	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1530	False	NA	-2	True	AATAAA	-26	NA	127489351	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127490149_127490794_127490888_127491165_127491373_127492792_127492888_127493015_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.27	chr10	+	2396	12	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	1418	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.6482566331068	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	2544	False	NA	-2	True	AATAAA	-26	NA	127490365	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127490480_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.28	chr10	+	178	1	Intergenic	novelGene_3072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGAATATACAGG	4611	False	NA	NA	False	NA	NA	NA	127492432	127492610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127492400_127492600
ES.3997.29	chr10	+	1537	5	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-1258	-12	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	101.635070226768	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	816	False	NA	-18	True	AATAAA	-10	NA	127494010	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127494130_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.3	chr10	+	3546	22	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	-430	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.6084769824104	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	1841	False	NA	-2	True	AATAAA	-26	NA	127478424	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127478456_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.30	chr10	+	1744	3	NIC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-1020	-12	intron_retention	FALSE	canonical	3	216	junction_2	17	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	1054	False	NA	-18	True	AATAAA	-10	NA	127494248	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127494570_127495301_127495368_127495457
ES.3997.4	chr10	+	3575	22	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	-417	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.6500528163747	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCTGAAAAGAAAGACACG	1854	False	NA	13	True	AATAAA	-41	NA	127478437	127496845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127478456_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494198_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.5	chr10	+	3980	23	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	-285	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.7374690298586	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACGCTAAGTGTTCGACA	1986	False	NA	27	True	AATAAA	-30	NA	127478569	127496859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127478688_127478800_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.6	chr10	+	3670	22	NNC	ENSMUSG00000002147.19	novel	768	3	NA	NA	-268	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	72.6084769824104	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	2003	False	NA	-18	True	AATAAA	-10	NA	127478586	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127478758_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.7	chr10	+	3912	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	-149	12	-149	-12	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAACAAAATAAATAAT	2122	False	NA	-18	True	AATAAA	-10	NA	127478705	127496814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ES.3997.9	chr10	+	3714	22	NNC	ENSMUSG00000002147.19	novel	3775	22	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_21	64.1970817570585	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTACTGTACACAATCT	2290	False	NA	-2	True	AATAAA	-26	NA	127478873	127496830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495709
ES.3998.1	chr10	+	518	2	FSM	ENSMUSG00000040195.12	ENSMUST00000124388.2	695	2	11	166	-10	123	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTTATGTGTTTG	1286	False	NA	NA	False	NA	NA	NA	127503002	127504554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127503253_127504286
ES.3998.10	chr10	+	4385	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-7	1749	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	48.9436857520968	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGAAGATCCTGAAGA	NA	False	NA	NA	False	AGTAAA	-18	NA	127512925	127534558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513831_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.12	chr10	+	1517	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	0	5	0	-5	multi-exon	FALSE	canonical	3	127	junction_4	19.2411595862157	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAGTGAGTTTGACT	NA	False	NA	NA	False	AATAAA	-18	NA	127512932	127531032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.13	chr10	+	5653	7	NIC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52.5592258525772	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512945	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127513097_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.15	chr10	+	5941	10	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.8600571181976	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTAGTCTTTTTAAAT	NA	False	NA	13	True	AATAAA	-13	NA	127512947	127536915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529357_127529468_127530297_127530524_127531237_127531412_127532096_127535684_127535723
ES.3998.16	chr10	+	5759	8	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.0297702151146	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512947	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127525205_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.17	chr10	+	6690	8	ISM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	13	-16	13	16	intron_retention	FALSE	canonical	3	115	junction_7	21.9535688140555	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTATTTTAATGTGTG	NA	False	NA	32	True	AATAAA	-32	NA	127512947	127536934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237
ES.3998.18	chr10	+	2918	6	NIC	ENSMUSG00000040195.12	novel	1522	7	NA	NA	14	-4	intron_retention	FALSE	canonical	3	127	junction_3	17.915356541247	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTGAGTTTGACTA	NA	False	NA	NA	False	AATAAA	-19	NA	127512948	127531033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127513097_127524101_127524218_127525093_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.19	chr10	+	8118	7	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	14	-3	intron_retention	FALSE	canonical	2	7	junction_1	56.3306212364899	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTAGTCTTTTTAAAT	NA	False	NA	13	True	AATAAA	-13	NA	127512948	127536915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513831_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.2	chr10	+	6260	10	NIC	ENSMUSG00000040195.12	novel	2362	11	NA	NA	36	49	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	61.6737733642726	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAACTTGTGTGAGTCT	1354	False	NA	65	True	ATTAAA	-29	NA	127503070	127536967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127503253_127512508_127512698_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.21	chr10	+	5874	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5019329511722	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512948	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525205_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.23	chr10	+	6719	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	48.9436857520968	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512949	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513831_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.24	chr10	+	1205	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	16	-526	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTGGCATGGTACCTT	NA	False	NA	NA	False	NA	NA	NA	127512950	127532283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.25	chr10	+	1207	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	18	297	16	-297	multi-exon	FALSE	canonical	3	127	junction_4	19.2411595862157	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGTGTTTGGTTTGTA	NA	False	NA	NA	False	AGTAAA	-39	NA	127512950	127530740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.26	chr10	+	5471	8	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.4440974482172	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512950	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096_127533979_127534155
ES.3998.27	chr10	+	3747	2	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTAGTCTTTTTAAAT	NA	False	NA	13	True	AATAAA	-13	NA	127512950	127536915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513066_127533283
ES.3998.28	chr10	+	7383	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	19	-5880	17	-1	multi-exon	FALSE	canonical	3	127	junction_4	19.2411595862157	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTCTTTTTAAATTA	NA	False	NA	15	True	AATAAA	-15	NA	127512951	127536917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.29	chr10	+	5784	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.7914840410877	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTAGTCTTTTTAAATT	NA	False	NA	14	True	AATAAA	-14	NA	127512951	127536916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531290_127531412_127532096
ES.3998.3	chr10	+	6123	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-81	-40	-79	40	multi-exon	FALSE	canonical	3	115	junction_7	22.4499443206436	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTGTGGACAACTTG	NA	False	NA	56	True	ATTAAA	-20	NA	127512853	127536958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.30	chr10	+	1722	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAAGTCATGTTCTTTA	NA	False	NA	NA	False	AATATA	-13	NA	127512960	127532810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.31	chr10	+	1509	7	NNC	ENSMUSG00000040195.12	novel	1522	7	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.466014329447	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTGAGTTTGACTA	NA	False	NA	NA	False	AATAAA	-19	NA	127512962	127531033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525314_127526708_127526803_127528836_127528931_127529352_127529468_127530297
ES.3998.32	chr10	+	5685	10	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	58.2588943032057	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTAGTCTTTTTAAA	NA	False	NA	12	True	AATAAA	-12	NA	127512962	127536914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096_127536233_127536371
ES.3998.34	chr10	+	177	1	Intergenic	novelGene_3073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTCTTTCCCATGA	1729	False	NA	NA	False	NA	NA	NA	127517512	127517689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127517500_127517700
ES.3998.4	chr10	+	5929	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-72	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.0385883425472	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATAGTAGTCTTTTTA	NA	False	NA	10	True	AATAAA	-10	NA	127512860	127536912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127512956_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.5	chr10	+	5908	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-37	13	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAGTATTTTAATGT	NA	False	NA	29	True	AATAAA	-29	NA	127512895	127536931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.6	chr10	+	3661	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-16	2357	-14	1752	multi-exon	FALSE	canonical	3	115	junction_7	22.4499443206436	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAGATCCTGAAGAGGT	NA	False	NA	NA	False	AGTAAA	-21	NA	127512918	127534561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.7	chr10	+	6527	8	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	2	4	junction_1	62.3737909375273	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTCTTTTTAAATTA	NA	False	NA	15	True	AATAAA	-15	NA	127512921	127536917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127524127_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237
ES.3998.8	chr10	+	1779	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	-12	4235	-10	-126	multi-exon	FALSE	canonical	3	115	junction_7	22.4499443206436	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATTTTTTACTTCTGTC	NA	False	NA	NA	False	TTTAAA	-18	NA	127512922	127532683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3998.9	chr10	+	5974	10	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.8338724778673	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGTCTTTTTAAATTA	NA	False	NA	15	True	AATAAA	-15	NA	127512922	127536917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127513097_127513527_127513635_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ES.3999.1	chr10	-	1365	3	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATTCTGTAAATTCTA	NA	False	NA	-5	True	NA	NA	NA	127493669	127484130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127484385_127485942_127486154_127492769
ES.3999.2	chr10	-	1019	4	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	3.09120616516523	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCCATTCTGTAAATTC	NA	False	NA	-7	True	NA	NA	NA	127489304	127484132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127484385_127485942_127486154_127486404_127486472_127488815
ES.3999.3	chr10	-	1911	5	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	3.11247489949718	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCCATTCTGTAAATTC	NA	False	NA	-7	True	NA	NA	NA	127489311	127484132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127484385_127485942_127486154_127486404_127486472_127487299_127488185_127488815
ES.3999.4	chr10	-	3364	3	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	3	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCCATTCTGTAAAT	NA	False	NA	-9	True	NA	NA	NA	127489307	127484134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127484385_127485942_127486154_127486404
ES.3999.5	chr10	-	800	6	Antisense	novelGene_ENSMUSG00000002147.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	2.99332590941915	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATCTTTTGTGTGTGT	NA	False	NA	-28	True	NA	NA	NA	127489337	127484153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127484385_127485942_127486154_127486404_127486472_127487299_127487519_127488815_127488847_127489296
ES.4.1	chr1	-	2250	2	FSM	ENSMUSG00000025902.14	ENSMUST00000191939.2	840	2	127	-1537	-4	3	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAGTATGTAATTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	4563831	4561150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4562892_4563322
ES.4.2	chr1	-	1784	2	FSM	ENSMUSG00000025902.14	ENSMUST00000191939.2	840	2	132	-1076	1	1	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCTCTCGCATCGAT	NA	False	NA	NA	False	AATAAA	-14	NA	4563826	4561611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4562892_4563322
ES.40.1	chr1	-	158	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4812	False	NA	NA	False	NA	NA	NA	6438750	6438592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_6438600_6438800
ES.400.1	chr1	+	172	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	44355430	44355602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_44355400_44355600
ES.4000.1	chr10	-	2946	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	-365	1	-365	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127502944	127496787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ES.4000.2	chr10	-	3505	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	-1194	0	742	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127503695	127496787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ES.4000.3	chr10	-	2478	7	NNC	ENSMUSG00000025402.13	novel	2582	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.589970855344	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127502576	127496787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127497649_127498699_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ES.4000.4	chr10	-	2305	7	NNC	ENSMUSG00000025402.13	novel	2582	7	NA	NA	336	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.6356787336308	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127502165	127496787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502106
ES.4000.5	chr10	-	2580	5	NIC	ENSMUSG00000025402.13	novel	2311	6	NA	NA	-107	-1	intron_retention	FALSE	canonical	3	27	junction_1	17.7623196683316	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCATGGCCCCCTTCCCC	NA	False	NA	-3	True	AATAAA	-19	NA	127502686	127496788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127497649_127499000_127499271_127499608_127499743_127500133_127501008_127502244
ES.4001.1	chr10	-	4787	2	Antisense	novelGene_ENSMUSG00000040195.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAACAACCTATTTTCTTT	9268	False	NA	NA	False	NA	NA	NA	127525314	127517747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127520973_127523752
ES.4001.2	chr10	-	174	1	Intergenic	novelGene_3074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGCTTTTAAATA	6046	False	NA	NA	False	NA	NA	NA	127519807	127519633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127519600_127519800
ES.4002.1	chr10	+	3047	25	NNC	ENSMUSG00000025401.10	novel	1062	4	NA	NA	1529	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.07205073915125	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCGTATTTATTTCT	NA	False	NA	21	True	AATAAA	-27	NA	127542567	127556808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127542588_127542688_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.2	chr10	+	3073	24	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1602	3	1602	2	3prime_fragment	FALSE	canonical	2	6	junction_6	3.36837286056462	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATATGCGTATTTATTT	NA	False	NA	19	True	AATAAA	-25	NA	127542640	127556806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.3	chr10	+	3682	23	NNC	ENSMUSG00000025401.10	novel	3439	27	NA	NA	1654	-2	intron_retention	FALSE	canonical	2	2	junction_12	3.98162099968392	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACATATGCGTATTT	NA	False	NA	15	True	AATAAA	-21	NA	127542692	127556802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550116_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.4	chr10	+	2957	22	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	2100	3	2100	2	3prime_fragment	FALSE	canonical	2	6	junction_4	3.28536920203054	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATATGCGTATTTATTT	NA	False	NA	19	True	AATAAA	-25	NA	127543138	127556806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.5	chr10	+	2934	21	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	2321	5	2321	0	3prime_fragment	FALSE	canonical	2	6	junction_3	3.278719262151	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACATATGCGTATTTAT	NA	False	NA	17	True	AATAAA	-23	NA	127543359	127556804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.6	chr10	+	1918	13	NNC	ENSMUSG00000025401.10	novel	3439	27	NA	NA	-5182	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.09945795874961	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATATGCGTATTTATTT	NA	False	NA	19	True	AATAAA	-25	NA	127550014	127556806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127550116_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
ES.4002.7	chr10	+	2232	2	ISM	ENSMUSG00000025401.10	ENSMUST00000219882.2	1062	4	-722	-4	-722	-1	intron_retention	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCGTATTTATTTCT	NA	False	NA	21	True	AATAAA	-27	NA	127554474	127556808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127555635_127555736
ES.4003.1	chr10	+	710	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-46	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACTGATGCAATAGGCT	NA	False	NA	6	True	AATAAA	-16	NA	127563669	127567636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
ES.4003.2	chr10	+	661	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.2325273828304	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGACTGATGCAATAGG	NA	False	NA	4	True	AATAAA	-14	NA	127563698	127567634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127563897_127564057_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
ES.4004.1	chr10	+	6004	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	-38	-6	-38	6	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGTGAGTTCCTTTCC	NA	False	NA	NA	False	NA	NA	NA	127575368	127583224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127575532_127577383
ES.4004.2	chr10	+	3670	2	NNC	ENSMUSG00000044617.9	novel	5960	2	NA	NA	-31	-2701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTGCATTCTGAC	NA	False	NA	NA	False	ATTAAA	-27	NA	127575375	127580517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127575912_127577383
ES.4004.3	chr10	+	3278	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	-20	2702	-20	-2702	multi-exon	FALSE	canonical	2	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTGCATTCTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	127575386	127580516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127575532_127577383
ES.4004.4	chr10	+	5801	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	-10	169	-10	-169	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTGTTTACTATCTGC	NA	False	NA	NA	False	ATTAAA	-25	NA	127575396	127583049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127575532_127577383
ES.4004.5	chr10	+	1882	5	Fusion	ENSMUSG00000044617.9_ENSMUSG00000099009.2	novel	5960	2	NA	NA	-2	-423	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTGCATGGTCATTCA	NA	False	NA	NA	False	AATAAA	-43	NA	127575404	127628140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127575532_127624476_127624736_127626057_127626222_127626684_127626934_127627057
ES.4005.1	chr10	-	2137	1	Genic_Genomic	ENSMUSG00000058396.8	novel	NA	NA	NA	NA	-21	-2341	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGAATCTCTGAGAAG	7958	False	NA	NA	False	AATAAA	-20	NA	127587622	127585485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_127585500_127587600
ES.4006.1	chr10	+	152	1	Intergenic	novelGene_3075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	3676	False	NA	NA	False	NA	NA	NA	127717714	127717866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127717700_127717900
ES.4007.1	chr10	-	224	1	Intergenic	novelGene_3076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAAATTCAATTCCCAA	NA	False	NA	NA	False	NA	NA	NA	127731862	127731638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127731600_127731900
ES.4008.1	chr10	+	2622	3	FSM	ENSMUSG00000040127.14	ENSMUST00000155067.8	1175	3	-83	-1364	-83	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAAATGTTTTTAG	9253	False	NA	NA	False	AATAAA	-19	NA	127737831	127747619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127738284_127739446_127739611_127745613
ES.4009.1	chr10	+	179	1	Intergenic	novelGene_3077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATCTGGTTCACA	NA	False	NA	NA	False	NA	NA	NA	127817188	127817367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127817200_127817400
ES.401.1	chr1	-	205	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	44568667	44568462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_44568500_44568700
ES.4010.1	chr10	+	172	1	Intergenic	novelGene_3078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	127829151	127829323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127829200_127829300
ES.4011.1	chr10	-	179	1	Intergenic	novelGene_3079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAGGAATGATTTCAC	NA	False	NA	NA	False	NA	NA	NA	127840817	127840638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127840600_127840800
ES.4012.11	chr10	+	1392	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	204.658958406903	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGATGTGCTCGGTT	1011	False	NA	12	True	TATAAA	-14	NA	127851067	127865900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127851221_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.13	chr10	+	3190	6	NNC	ENSMUSG00000025395.15	novel	3128	11	NA	NA	26	833	intron_retention	FALSE	non_canonical	0	0	junction_4	261.830937820572	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTGTTCCTGAGAAT	1034	False	NA	NA	False	AATAAA	-20	NA	127851090	127858823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854685_127855290_127856136_127857541
ES.4012.14	chr10	+	2733	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	52	-1202	28	1202	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTCTGTTTTAGTG	1036	False	NA	NA	False	AATAGA	-13	NA	127851092	127867108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.16	chr10	+	3262	11	FSM	ENSMUSG00000025395.15	ENSMUST00000133285.8	3128	11	31	-165	31	-3	multi-exon	FALSE	canonical	3	618	junction_1	41.6424062705315	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTGATGTGCTCGGT	1039	False	NA	11	True	TATAAA	-13	NA	127851095	127865899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.18	chr10	+	3304	13	NNC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	57	1776	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	197.883997303695	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1065	False	NA	NA	False	NA	NA	NA	127851121	127867682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127851221_127851832_127851991_127853818_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.19	chr10	+	204	1	Intergenic	novelGene_3080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTCGATAAAAAAAAAACT	3426	False	NA	NA	False	NA	NA	NA	127853482	127853686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127853500_127853700
ES.4012.2	chr10	+	1606	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	-23	0	-19	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCGGTTCTACCC	961	False	NA	18	True	TATAAA	-20	NA	127851017	127865906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.20	chr10	+	1202	9	ISM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	4774	46	-10	8	3prime_fragment	FALSE	canonical	2	393	junction_3	109.545010726185	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTTGTAAAATGTATT	5758	False	NA	10	True	AATAAA	-20	NA	127855814	127865860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.21	chr10	+	1577	8	NIC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	99	0	intron_retention	FALSE	canonical	3	557	junction_2	59.846743044724	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCCTCAATCCTTGAA	5867	False	NA	23	True	AATAAA	-16	NA	127855923	127865734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127856136_127857541_127857601_127858731_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.22	chr10	+	3547	1	NIC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	997	2378	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAACTGAAGCCTGG	6765	False	NA	NA	False	NA	NA	NA	127856821	127860368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127856800_127860400
ES.4012.23	chr10	+	2360	5	NNC	ENSMUSG00000025395.15	novel	3128	11	NA	NA	2432	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	316.394038344593	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTGATGTGCTCGGT	8200	False	NA	11	True	TATAAA	-13	NA	127858256	127865899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127858400_127860689_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.3	chr10	+	2183	12	NIC	ENSMUSG00000025395.15	novel	1583	13	NA	NA	1	-5	intron_retention	FALSE	canonical	3	557	junction_6	52.0176384579673	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGACTTCTGATGTGCTCG	985	False	NA	9	True	TATAAA	-11	NA	127851041	127865897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.6	chr10	+	655	1	NIC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	-1	-6272	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1007	False	NA	NA	False	NA	NA	NA	127851063	127851718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127851100_127851700
ES.4012.7	chr10	+	1388	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	23	172	-1	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGCCTCAATCCTTGAA	1007	False	NA	23	True	AATAAA	-16	NA	127851063	127865734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.8	chr10	+	1691	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	23	-131	-1	131	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTTAGTCGTGGCTC	1007	False	NA	NA	False	TATAAA	-18	NA	127851063	127866037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ES.4012.9	chr10	+	2195	8	NIC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	-1	2350	intron_retention	FALSE	canonical	3	557	junction_6	37.692093037546	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	1007	False	NA	NA	False	NA	NA	NA	127851063	127860340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127859544_127859649
ES.4013.1	chr10	+	1626	9	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	-1439	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3777.7938316397	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATGTGGGGGAAAAATC	3473	False	NA	38	True	AGTAAA	-4	NA	127870004	127884540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127870410_127871145_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.12	chr10	+	696	7	NIC	ENSMUSG00000061315.15	novel	885	8	NA	NA	-23	-5	combination_of_known_splicesites	FALSE	canonical	2	150	junction_4	4204.14524276008	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTCAGCAGGTGCTAG	4949	False	NA	-5	True	AATAAA	-19	NA	127871480	127884497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883867_127883997_127884113_127884237_127884361
ES.4013.14	chr10	+	1085	9	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4851.16262965642	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCAGGTGCTAGATCT	4951	False	NA	-1	True	AATAAA	-23	NA	127871482	127884501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127880715_127880956_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.15	chr10	+	3395	1	NIC	ENSMUSG00000061315.15	novel	885	8	NA	NA	-14	-9618	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGTGACCGTCATTCT	4958	False	NA	NA	False	NA	NA	NA	127871489	127874884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127871500_127874900
ES.4013.18	chr10	+	820	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3867.5424037621	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGCAGGTGCTAGATC	4970	False	NA	-2	True	AATAAA	-22	NA	127871501	127884500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882125_127882604_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.23	chr10	+	783	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4014.0377503487	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTCAGCAGGTGCTA	4982	False	NA	-6	True	AATAAA	-18	NA	127871513	127884496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884387
ES.4013.24	chr10	+	805	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3981.56060060958	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCAGGTGCTAGATCT	4982	False	NA	-1	True	AATAAA	-23	NA	127871513	127884501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882667_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.25	chr10	+	2950	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	70	-2135	10	2131	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCACTAAATTTGCTT	4982	False	NA	NA	False	NA	NA	NA	127871513	127886637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.26	chr10	+	805	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5170.50936976785	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTGCTAGATCTTTTC	4984	False	NA	3	True	AATAAA	-27	NA	127871515	127884505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883669_127883867_127883991_127884113_127884237_127884361
ES.4013.27	chr10	+	717	7	NIC	ENSMUSG00000061315.15	novel	885	8	NA	NA	14	-8	combination_of_known_splicesites	FALSE	canonical	2	139	junction_2	3986.78979742962	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGACTCAGCAGGTGC	4986	False	NA	-8	True	AATAAA	-16	NA	127871517	127884494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127871553_127872357_127872430_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.28	chr10	+	927	7	ISM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	84	-1	24	1	intron_retention	FALSE	canonical	3	9741	junction_1	903.91592529394	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGGTGCTAGATCTTT	4996	False	NA	1	True	AATAAA	-25	NA	127871527	127884503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113
ES.4013.29	chr10	+	1607	7	NIC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	24	1	intron_retention	FALSE	canonical	3	10794	junction_5	661.048409725037	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGGTGCTAGATCTTT	4996	False	NA	1	True	AATAAA	-25	NA	127871527	127884503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.3	chr10	+	937	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	4018.5497688716	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGGTGCTAGATCTTT	4930	False	NA	1	True	AATAAA	-25	NA	127871461	127884503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872288_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.30	chr10	+	1839	7	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	36	-2	intron_retention	FALSE	canonical	3	8	junction_1	4171.11598442857	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGCAGGTGCTAGATC	5008	False	NA	-2	True	AATAAA	-22	NA	127871539	127884500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127872130_127872357_127872430_127882036_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.31	chr10	+	1365	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	4035.84290566217	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTGCTAGATCTTTTC	5012	False	NA	3	True	AATAAA	-27	NA	127871543	127884505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127872130_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.32	chr10	+	961	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	284	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4038.26408452029	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCAGGTGCTAGATCT	5256	False	NA	-1	True	AATAAA	-23	NA	127871787	127884501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871974_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.33	chr10	+	2770	7	ISM	ENSMUSG00000061315.15	ENSMUST00000092048.13	6745	9	7384	6	7384	-2	3prime_fragment	FALSE	canonical	0	0	junction_1	4271.23095709994	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGCAGGTGCTAGATC	NA	False	NA	-2	True	AATAAA	-22	NA	127878887	127884500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127880956_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.4	chr10	+	837	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	2	538	junction_4	3797.72156183474	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGGTGCTAGATCTTT	4934	False	NA	1	True	AATAAA	-25	NA	127871465	127884503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883553_127883674_127883867_127883997_127884113_127884237_127884361
ES.4013.7	chr10	+	849	8	NNC	ENSMUSG00000061315.15	novel	885	8	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4017.53134679108	1175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCAGGTGCTAGATCT	4941	False	NA	-1	True	AATAAA	-23	NA	127871472	127884501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884119_127884237_127884361
ES.4013.9	chr10	+	7849	8	NIC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	-26	1	intron_retention	FALSE	canonical	2	7	junction_2	3953.36512818317	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGGTGCTAGATCTTT	4946	False	NA	1	True	AATAAA	-25	NA	127871477	127884503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127871553_127872357_127872430_127875039_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ES.4014.1	chr10	+	1843	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	-100	257	-100	37	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTGTAATTTCATGT	746	False	NA	-30	True	AATAAA	-37	NA	127894722	127912884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.10	chr10	+	1805	9	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	27	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1568.46411737725	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	873	False	NA	14	True	AATAAA	-15	NA	127894849	127912862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127909051_127909163_127910090_127910154_127911206_127911232_127911935
ES.4014.100	chr10	+	8363	31	NNC	ENSMUSG00000040054.18	novel	8443	30	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	143.335255801061	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127927488	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127927646_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955187_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.101	chr10	+	8530	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	121.396942293031	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127928549	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.103	chr10	+	8402	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-69	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	140.43839124694	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAGACTCAAGATTG	NA	False	NA	-10	True	AATAAA	-10	NA	127928582	127965162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961971_127962111_127962194_127962339_127962456
ES.4014.105	chr10	+	6189	30	NNC	ENSMUSG00000040054.18	novel	8372	30	NA	NA	-14	-2252	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	137.199179095037	713	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTCCTCCTTCCCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	127928637	127962919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.106	chr10	+	7780	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-14	-661	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	121.396942293031	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTTAGTCAGATGTT	NA	False	NA	NA	False	CATAAA	-38	NA	127928637	127964510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.108	chr10	+	6348	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-13	-2085	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	154.957184067644	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTCGAGCCGGACAC	NA	False	NA	NA	False	AGTAAA	-16	NA	127928638	127963086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954828_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959977_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.109	chr10	+	8467	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	137.561608724985	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127928648	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.110	chr10	+	7948	30	NNC	ENSMUSG00000040054.18	novel	8372	30	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	152.720723873987	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAAGATTGCATGTTT	NA	False	NA	-3	True	AATAAA	-17	NA	127928649	127965169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127947102_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.111	chr10	+	8331	31	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	138.079139948397	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127928652	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955211_127955300_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.112	chr10	+	8320	30	NNC	ENSMUSG00000040054.18	novel	8372	30	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.920836489489	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127928658	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928679_127932302_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.113	chr10	+	8279	31	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	138.501780975312	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGACTCAAGATTGCA	NA	False	NA	-8	True	AATAAA	-12	NA	127928661	127965164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955211_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.114	chr10	+	8739	28	NNC	ENSMUSG00000040054.18	novel	8372	30	NA	NA	20	-5	intron_retention	FALSE	canonical	0	0	junction_25	152.204955315182	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127928671	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127928720_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127961052_127961137_127961271_127961367_127961515_127961971_127962111_127962194_127962339_127962456
ES.4014.117	chr10	+	8407	30	NNC	ENSMUSG00000040054.18	novel	2455	13	NA	NA	631	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	123.091605728065	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTGCATGTTTCTCT	NA	False	NA	1	True	AATAAA	-21	NA	127929282	127965173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127929388_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.118	chr10	+	8455	30	NNC	ENSMUSG00000040054.18	novel	2455	13	NA	NA	644	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	131.454897253357	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127929295	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127929388_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.119	chr10	+	8398	31	NNC	ENSMUSG00000040054.18	novel	2455	13	NA	NA	-1512	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.738966966587	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127930736	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127930842_127932248_127932308_127932372_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.12	chr10	+	2658	8	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	-6	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1325.90558964545	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	897	False	NA	14	True	AATAAA	-15	NA	127894873	127912862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910354_127910418_127911232_127911935
ES.4014.121	chr10	+	8658	30	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	481	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	144.373178756831	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127932729	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127945009_127945254_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.122	chr10	+	8420	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	482	5	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATGTTTCTCTCCTG	NA	False	NA	5	True	AATAAA	-25	NA	127932730	127965177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.123	chr10	+	8318	30	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	482	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_13	103.989252165754	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGATTGCATGTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	127932730	127965171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955187_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.124	chr10	+	8350	30	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	486	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_22	123.53586759577	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGATTGCATGTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	127932734	127965171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955187_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.126	chr10	+	7781	28	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.019016962186	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAGACTCAAGATTG	NA	False	NA	-10	True	AATAAA	-10	NA	127932736	127965162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127947102_127947218_127948450_127948637_127949333_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127958004_127958180_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.127	chr10	+	8323	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	107.38543966973	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTGCATGTTTCTCT	NA	False	NA	1	True	AATAAA	-21	NA	127932736	127965173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948537_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.128	chr10	+	6537	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	-1871	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTCCTCATCTTCT	NA	False	NA	NA	False	AAAACA	-19	NA	127932736	127963300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.13	chr10	+	1642	7	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1429.30585328061	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTGTCCTTTTAAGT	903	False	NA	13	True	AATAAA	-14	NA	127894879	127912861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910158_127911935
ES.4014.130	chr10	+	6323	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	-2085	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTCGAGCCGGACAC	NA	False	NA	NA	False	AGTAAA	-16	NA	127932736	127963086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.134	chr10	+	8663	27	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	489	-1	intron_retention	FALSE	canonical	3	275	junction_3	82.9417436532214	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127932737	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955748_127956979_127957195_127957459_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.136	chr10	+	7706	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	493	-733	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_21	106.704358641347	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATATTTGAATTGACTT	NA	False	NA	NA	False	TTTAAA	-15	NA	127932741	127964438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.138	chr10	+	8439	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	494	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_21	106.704358641347	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932742	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.14	chr10	+	1917	8	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1296.23794741804	1548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCACTCCTGAATTA	903	False	NA	22	True	AATAAA	-23	NA	127894879	127913124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895147_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.140	chr10	+	8366	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	494	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_25	130.96429545366	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATGTTTCTCTCCTG	NA	False	NA	5	True	AATAAA	-25	NA	127932742	127965177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961514_127961620_127961886_127962111_127962194_127962339_127962456
ES.4014.142	chr10	+	8400	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	496	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	120.431468148521	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATGTTTCTCTCCTG	NA	False	NA	5	True	AATAAA	-25	NA	127932744	127965177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952424_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.143	chr10	+	8539	28	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	497	-5	intron_retention	FALSE	canonical	2	6	junction_7	111.266237390281	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127932745	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951907_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.144	chr10	+	6150	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	497	-2252	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	94.4797988882236	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTCCTCCTTCCCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	127932745	127962919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.146	chr10	+	8360	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	500	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	130.97211106778	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932748	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951907_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127960034_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.148	chr10	+	7668	26	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	500	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	125.588445328382	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAGACTCAAGATTG	NA	False	NA	-10	True	AATAAA	-10	NA	127932748	127965162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950346_127952552_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.15	chr10	+	2366	7	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	58	280	1	14	intron_retention	FALSE	canonical	3	2990	junction_6	322.335573932233	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTGTCCTTTTAAGT	904	False	NA	13	True	AATAAA	-14	NA	127894880	127912861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206
ES.4014.150	chr10	+	8369	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	505	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	108.959644280039	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127932753	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961388_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.152	chr10	+	7912	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	506	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	128.298773396717	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932754	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127947102_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.154	chr10	+	8417	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	506	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	149.313441546736	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932754	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951907_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957666_127957850_127957934_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.155	chr10	+	8384	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	506	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	107.831666811503	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGATTGCATGTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	127932754	127965171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949337_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.156	chr10	+	8514	28	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	506	0	intron_retention	FALSE	canonical	3	275	junction_3	81.3915665509894	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932754	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.159	chr10	+	7710	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	510	-676	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGCTGTAACAAACTTTG	NA	False	NA	NA	False	CATAAA	-23	NA	127932758	127964495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.16	chr10	+	1486	9	Fusion	ENSMUSG00000040054.18_ENSMUSG00000071072.13	novel	2000	8	NA	NA	2	-5	multi-exon	FALSE	non_canonical	0	0	junction_8	1241.50442382418	5274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	905	False	NA	-6	True	AATAAA	-14	NA	127894881	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935_127912024_127964503
ES.4014.164	chr10	+	12508	18	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	intron_retention	FALSE	canonical	3	23	junction_15	115.663035219827	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127957535_127957668_127957850_127957936_127958320_127958892_127959525_127959634_127959894_127959975_127961052_127961137_127962111_127962194
ES.4014.172	chr10	+	8200	30	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	124.652916467401	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127932760	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948537_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955187_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.174	chr10	+	9349	28	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	517	-5	intron_retention	FALSE	canonical	3	275	junction_3	81.0995425540066	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127932765	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.176	chr10	+	5623	6	NIC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	14023	1131	intron_retention	FALSE	canonical	3	290	junction_1	30.8051943671842	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127946271	127953757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127948637_127949331_127949551_127950202_127950653_127950893_127952039_127952174_127952277_127952415
ES.4014.179	chr10	+	5441	15	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	14511	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	147.814555633547	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127946759	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952533_127960268_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.182	chr10	+	9897	21	NIC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	16272	-1	intron_retention	FALSE	canonical	3	290	junction_1	82.7207803396462	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127948520	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127948637_127949331_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.185	chr10	+	7292	25	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	17127	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	135.168561176612	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127949375	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955130_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.186	chr10	+	7402	24	NIC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	17157	0	intron_retention	FALSE	canonical	3	328	junction_2	74.2267256808018	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127949405	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.187	chr10	+	7526	24	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	18074	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.10167398339	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAAGACTCAAGATTG	NA	False	NA	-10	True	AATAAA	-10	NA	127950322	127965162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127950653_127950893_127951510_127951907_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.188	chr10	+	4283	25	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	18336	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	123.253127073244	756	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127950584	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456_127962624_127965028
ES.4014.189	chr10	+	6243	18	NIC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	22190	-5	intron_retention	FALSE	canonical	3	370	junction_2	70.8438509051609	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127954438	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.190	chr10	+	6045	18	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	22572	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_15	99.9814515669754	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127954820	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.191	chr10	+	2387	3	NNC	ENSMUSG00000040054.18	novel	2455	13	NA	NA	22611	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127954859	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127954890_127955138_127955270_127962940
ES.4014.192	chr10	+	3499	6	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	22921	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	221.068858051061	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127955169	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127955347_127961177_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.193	chr10	+	5761	18	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	22974	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	126.468782476849	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGCGGCTGTAGAAAAG	NA	False	NA	-57	True	AAAAAG	-45	NA	127955222	127965115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456_127964912_127964988
ES.4014.196	chr10	+	5415	11	NNC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	25692	-5	intron_retention	FALSE	canonical	3	142	junction_8	124.042774880281	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127957940	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
ES.4014.197	chr10	+	4817	10	ISM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	30238	3	26641	-2	3prime_fragment	FALSE	canonical	3	377	junction_7	76.2405225844538	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAAGATTGCATGTTT	NA	False	NA	-3	True	AATAAA	-17	NA	127958889	127965169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.2	chr10	+	2034	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	-36	2	-36	-2	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCAGTGTCACCTTGT	810	False	NA	37	True	AATAAA	-38	NA	127894786	127913139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.20	chr10	+	3229	1	NIC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	17	-10118	mono-exon	FALSE	NA	NA	NA	NA	NA	1422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGGCCTGTTTGTTG	920	False	NA	NA	False	NA	NA	NA	127894896	127898125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127894900_127898100
ES.4014.200	chr10	+	5084	4	NIC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	27514	-5	intron_retention	FALSE	canonical	3	454	junction_1	80.0041665581654	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127959762	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127959858_127959975_127962111_127962194_127962339_127962456
ES.4014.202	chr10	+	3801	7	ISM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	31551	6	27954	-5	3prime_fragment	FALSE	canonical	3	377	junction_4	85.8111621850885	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAAGATTGCATG	NA	False	NA	-6	True	AATAAA	-14	NA	127960202	127965166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.203	chr10	+	4491	4	NIC	ENSMUSG00000040054.18	novel	8411	29	NA	NA	28143	-1	intron_retention	FALSE	canonical	3	527	junction_2	52.4658619167423	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	127960391	127965170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127961052_127961137_127962111_127962194_127962339_127962456
ES.4014.21	chr10	+	2065	7	NIC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	29	15	intron_retention	FALSE	canonical	3	2953	junction_6	424.419374623209	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTCCTTTTAAGTG	932	False	NA	14	True	AATAAA	-15	NA	127894908	127912862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127895156_127904540_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.25	chr10	+	1096	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	234	670	177	-376	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGTACTTT	1080	False	NA	NA	False	ACTAAA	-12	NA	127895056	127912471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.26	chr10	+	1382	4	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	13112	4	2794	-4	3prime_fragment	FALSE	canonical	3	2953	junction_3	438.430787645616	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAGCAGTGTCACCTT	5886	False	NA	35	True	AATAAA	-36	NA	127907934	127913137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.27	chr10	+	1105	4	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	13112	281	2794	13	3prime_fragment	FALSE	canonical	3	2953	junction_3	438.430787645616	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTGTCCTTTTAAG	5886	False	NA	12	True	AATAAA	-13	NA	127907934	127912860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127908027_127910090_127910154_127911206_127911232_127911935
ES.4014.28	chr10	+	2613	4	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	3104	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1400.85997396837	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTGTCCTTTTAAGT	6196	False	NA	13	True	AATAAA	-14	NA	127908244	127912861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127908330_127908576_127910154_127911206_127911232_127911935
ES.4014.29	chr10	+	173	1	Intergenic	novelGene_3083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACATAACCTGG	NA	False	NA	NA	False	NA	NA	NA	127915892	127916065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127915900_127916100
ES.4014.30	chr10	+	178	1	Intergenic	novelGene_3084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	127916493	127916671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127916500_127916700
ES.4014.31	chr10	+	1923	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	-8	1	-8	-1	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGGGCCTTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	127919133	127926259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.32	chr10	+	3041	7	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	12	3	intron_retention	FALSE	canonical	3	9425	junction_2	725.289233493937	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTATGTTGCTTC	NA	False	NA	25	True	AATAAA	-18	NA	127919153	127926145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.35	chr10	+	1803	11	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-1	56733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	3213.76686148824	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	127919173	127982993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887_127926139_127982952
ES.4014.36	chr10	+	1764	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3385.75991069058	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTATGTTGCTTC	NA	False	NA	25	True	AATAAA	-18	NA	127919174	127926145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919940_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.39	chr10	+	2379	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	9425	junction_3	721.535861894612	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919176	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.4	chr10	+	1706	7	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	1	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1429.30585328061	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGTCCTTTTAAGTGT	847	False	NA	15	True	AATAAA	-16	NA	127894823	127912863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910164_127911935
ES.4014.40	chr10	+	1747	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3384.30549069096	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919176	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920972_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.43	chr10	+	2603	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	9425	junction_2	680.035653327028	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919176	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.44	chr10	+	1998	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	0	intron_retention	FALSE	canonical	2	3	junction_2	3780.13489663196	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919176	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920959_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.45	chr10	+	1766	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3339.9576215246	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919176	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921502_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.46	chr10	+	1595	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3318.14612824617	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919176	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127924863_127925887
ES.4014.47	chr10	+	1587	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	3587.18158647914	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919176	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.5	chr10	+	1386	1	NIC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	17	-12018	mono-exon	FALSE	NA	NA	NA	NA	NA	1420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTGTAAAGAAATTTG	863	False	NA	NA	False	NA	NA	NA	127894839	127896225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127894800_127896200
ES.4014.50	chr10	+	5574	6	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_4	4105.94820230358	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919176	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127921082_127921310_127922066_127922166_127922966_127923165_127924403_127924825
ES.4014.51	chr10	+	1766	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	35	115	2	3	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTATGTTGCTTC	NA	False	NA	25	True	AATAAA	-18	NA	127919176	127926145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.52	chr10	+	1802	11	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	56734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3213.76686148824	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	127919176	127982994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887_127926129_127982941
ES.4014.53	chr10	+	1794	11	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	2	49677	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	3213.76686148824	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAGGCAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	127919176	127975937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887_127926148_127975911
ES.4014.55	chr10	+	464	3	NNC	ENSMUSG00000025393.13	novel	343	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5204	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919177	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919937_127925998
ES.4014.56	chr10	+	1772	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3387.44187322003	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTATGTTGCTTC	NA	False	NA	25	True	AATAAA	-18	NA	127919177	127926145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921303_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.57	chr10	+	4201	2	Fusion	ENSMUSG00000025393.13_ENSMUSG00000064778.4	novel	1288	2	NA	NA	3	-1342	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATACTTTTTGGGATTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	127919177	127923578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127922966_127923165
ES.4014.58	chr10	+	3345	5	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	5	3	intron_retention	FALSE	canonical	3	10302	junction_3	584.271929413009	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTATGTTGCTTC	NA	False	NA	25	True	AATAAA	-18	NA	127919179	127926145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.59	chr10	+	1728	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	3370.33381502357	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919180	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924855_127925028_127925887
ES.4014.61	chr10	+	1721	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3384.30549069096	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919181	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920294_127920946_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.62	chr10	+	2604	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	-1	intron_retention	FALSE	canonical	3	9648	junction_2	623.475708575461	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATGTCTGTTTATGTT	NA	False	NA	20	True	AATAAA	-13	NA	127919181	127926140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.63	chr10	+	1745	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3387.44187322003	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919181	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921070_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.64	chr10	+	3432	6	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	9425	junction_2	777.70570269222	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919181	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127921082_127921310_127922066_127922166_127922290_127924189_127925028_127925887
ES.4014.65	chr10	+	1304	7	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	4081.83569814693	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGGGCCTTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	127919181	127926259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919919_127921970_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.66	chr10	+	1986	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	8904	junction_3	834.687881411369	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919181	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.67	chr10	+	3110	6	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	7	0	intron_retention	FALSE	canonical	3	9425	junction_2	793.791660324042	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919181	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127921082_127921310_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.7	chr10	+	4463	1	NIC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	18	-8940	mono-exon	FALSE	NA	NA	NA	NA	NA	1422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCAGTTTCTTTGTTGT	864	False	NA	NA	False	TTTAAA	-5	NA	127894840	127899303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127894800_127899300
ES.4014.70	chr10	+	2265	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	8904	junction_3	926.419682741806	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919185	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.72	chr10	+	5134	5	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	10302	junction_3	376.681148320433	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919185	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127922066_127922166_127924403_127924825_127925028_127925887
ES.4014.73	chr10	+	2127	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	44	-255	11	255	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCTTAAGATCCCTTA	NA	False	NA	NA	False	NA	NA	NA	127919185	127926515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.74	chr10	+	2161	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	12	-2	intron_retention	FALSE	canonical	3	8904	junction_3	880.241577281487	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919186	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.75	chr10	+	4063	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	8904	junction_3	752.424625013383	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919186	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127922066_127922166_127924403_127924825_127925028_127925887
ES.4014.76	chr10	+	1732	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	1	149	junction_8	3325.05740784007	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919186	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924843_127925028_127925887
ES.4014.77	chr10	+	1746	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3353.06105587781	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919186	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922060_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.79	chr10	+	2274	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	13	-7	intron_retention	FALSE	canonical	3	8904	junction_3	880.241577281487	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTCTATGGGCCTT	NA	False	NA	4	True	ATTAAA	-15	NA	127919187	127926253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.8	chr10	+	1962	7	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1429.30585328061	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCAGTGTCACCTTGT	867	False	NA	37	True	AATAAA	-38	NA	127894843	127913139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910164_127911935
ES.4014.81	chr10	+	6314	3	Fusion	ENSMUSG00000104755.3_ENSMUSG00000025393.13	novel	343	2	NA	NA	15	0	intron_retention	FALSE	non_canonical	0	0	junction_2	5204	2959	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919189	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127919323_127919760_127922966_127923165
ES.4014.82	chr10	+	2380	8	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	15	-2	intron_retention	FALSE	canonical	3	8904	junction_2	904.047677991395	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919189	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127920341_127920959_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.83	chr10	+	1728	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3339.9576215246	2959	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919189	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921927_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.84	chr10	+	2506	5	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	15	-1342	intron_retention	FALSE	non_canonical	0	0	junction_4	4969.66734299188	2869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATACTTTTTGGGATTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	127919189	127923578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127919323_127919760_127919944_127920959_127921082_127921310_127922966_127923165
ES.4014.85	chr10	+	3209	6	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	34	-2	intron_retention	FALSE	canonical	3	10302	junction_4	529.666536605816	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTATGTCTGTTTATGT	NA	False	NA	19	True	AATAAA	-12	NA	127919208	127926139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127919323_127919760_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.86	chr10	+	1617	9	ISM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	618	119	-542	0	3prime_fragment	FALSE	canonical	3	8904	junction_2	906.111472171057	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127919759	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.87	chr10	+	1434	8	ISM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	1023	119	-137	0	3prime_fragment	FALSE	canonical	3	8904	junction_1	924.840592993722	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127920164	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.88	chr10	+	2463	6	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-22	-5	intron_retention	FALSE	canonical	3	9425	junction_1	786.77391924237	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTCTATGGGCCTTGT	NA	False	NA	6	True	ATTAAA	-17	NA	127920279	127926255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.89	chr10	+	4509	2	Fusion	ENSMUSG00000104755.3_ENSMUSG00000025393.13	novel	399	2	NA	NA	-382	0	intron_retention	FALSE	canonical	3	11272	junction_1	0	2959	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127920772	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_127925028_127925887
ES.4014.90	chr10	+	4102	3	NNC	ENSMUSG00000025393.13	novel	948	2	NA	NA	-377	0	intron_retention	TRUE	non_canonical	0	0	junction_1	5151	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127921237	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127923069_127923447_127924403_127924825
ES.4014.91	chr10	+	1255	6	ISM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	2168	1	-305	-1	3prime_fragment	FALSE	canonical	3	10302	junction_4	475.718992683706	2959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGGGCCTTGTGTTT	NA	False	NA	10	True	ATTAAA	-21	NA	127921309	127926259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ES.4014.92	chr10	+	1782	3	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-119	-1342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5351.5	2869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATACTTTTTGGGATTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	127921495	127923578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127922066_127922166_127922966_127923165
ES.4014.93	chr10	+	4051	1	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	-8	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2959	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTCTGTTTATGTTG	NA	False	NA	21	True	AATAAA	-14	NA	127922090	127926141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127922100_127926100
ES.4014.94	chr10	+	8496	30	FSM	ENSMUSG00000040054.18	ENSMUST00000220049.2	8443	30	-48	-5	5	5	multi-exon	FALSE	canonical	3	5	junction_1	122.877257667329	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCATGTTTCTCTCCTG	NA	False	NA	5	True	AATAAA	-25	NA	127927455	127965177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_127927646_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.95	chr10	+	8881	31	NIC	ENSMUSG00000040054.18	novel	8443	30	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	138.77021774622	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127927456	127965172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_127927646_127928328_127928720_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.97	chr10	+	8521	30	NNC	ENSMUSG00000040054.18	novel	8443	30	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	122.770350078925	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGATTGCATGTTTCT	NA	False	NA	-1	True	AATAAA	-19	NA	127927483	127965171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127927646_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4014.98	chr10	+	8447	31	NNC	ENSMUSG00000040054.18	novel	8443	30	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	138.940450873347	759	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGATTGCATGTTTCTCT	NA	False	NA	1	True	AATAAA	-21	NA	127927487	127965173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_127927646_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955211_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ES.4015.1	chr10	+	156	1	Intergenic	novelGene_3089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	127995464	127995620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_127995500_127995600
ES.4016.1	chr10	+	245	1	Intergenic	novelGene_3091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCACTGAGC	NA	False	NA	NA	False	NA	NA	NA	128004849	128005094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128004800_128005100
ES.4017.1	chr10	+	171	1	Intergenic	novelGene_3093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAGAGAAAAAAGT	2228	False	NA	NA	False	NA	NA	NA	128013971	128014142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128014000_128014100
ES.4018.1	chr10	+	182	1	Intergenic	novelGene_3094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAATAAAAATTAA	5551	False	NA	NA	False	NA	NA	NA	128020792	128020974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128020800_128021000
ES.4019.1	chr10	+	210	1	Intergenic	novelGene_3096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAACCAGCTGGGCGT	NA	False	NA	NA	False	AATAAA	-5	NA	128028441	128028651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128028400_128028700
ES.402.1	chr1	+	3178	12	NNC	ENSMUSG00000056870.10	novel	3138	11	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.37317003490604	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	False	NA	NA	False	AATAAA	-8	NA	44590725	44835986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44591033_44623150_44623258_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.2	chr1	+	3020	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	118	0	-64	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590788	44835998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.3	chr1	+	2897	10	NIC	ENSMUSG00000056870.10	novel	3138	11	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.75679813133812	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	False	NA	NA	False	AATAAA	-8	NA	44590827	44835986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44591033_44728303_44728376_44747776_44747839_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.4	chr1	+	3086	12	NNC	ENSMUSG00000056870.10	novel	3138	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.78215802146644	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590833	44835998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44810589_44810701_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.5	chr1	+	3035	12	NNC	ENSMUSG00000056870.10	novel	3138	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.64285438435771	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590854	44835998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44812742_44812824_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.6	chr1	+	2946	12	NIC	ENSMUSG00000056870.10	novel	2798	12	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	7.64285438435771	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	False	NA	NA	False	AATAAA	-8	NA	44590874	44835986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44812799_44812824_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ES.402.7	chr1	+	4922	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAGTAAGAAAG	NA	False	NA	NA	False	AAAACA	-12	NA	44741596	44746518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_44741600_44746500
ES.4020.1	chr10	+	2684	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.0851081808844	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATATTTTG	NA	False	NA	14	True	AATAAA	-20	NA	128030306	128045812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128030777_128030961_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.10	chr10	+	2153	17	FSM	ENSMUSG00000044005.14	ENSMUST00000143827.8	2176	17	31	-8	2	0	multi-exon	FALSE	canonical	0	0	junction_3	27.1773688020014	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATTTTATATTTT	NA	False	NA	13	True	AATAAA	-19	NA	128030618	128045811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.11	chr10	+	2130	17	ISM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	4719	-2	-4080	-1	3prime_fragment	FALSE	canonical	3	75	junction_2	12.923905901468	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTATTTTATATTT	1356	False	NA	12	True	AATAAA	-18	NA	128035044	128045810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.12	chr10	+	2779	11	FSM	ENSMUSG00000044005.14	ENSMUST00000135441.2	1529	11	-1249	-1	-741	1	multi-exon	FALSE	canonical	3	100	junction_6	5.46351535185909	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATATTTTG	2155	False	NA	14	True	AATAAA	-20	NA	128038383	128045812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.13	chr10	+	2389	10	NIC	ENSMUSG00000044005.14	novel	1529	11	NA	NA	-224	-2	intron_retention	FALSE	canonical	3	100	junction_5	5.62621728940985	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATAATTTTTATTTTAT	2672	False	NA	8	True	AATAAA	-14	NA	128038900	128045806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128039725_128039943_128040003_128040529_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.14	chr10	+	3381	6	NIC	ENSMUSG00000044005.14	novel	1529	11	NA	NA	803	1	intron_retention	FALSE	canonical	3	100	junction_1	6.88767014308903	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATAATTTTTATTTT	141	False	NA	6	True	AATAAA	-12	NA	128040435	128045804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.15	chr10	+	1355	7	ISM	ENSMUSG00000044005.14	ENSMUST00000135441.2	1529	11	1224	5	1224	-2	3prime_fragment	FALSE	canonical	3	100	junction_2	6.6248689714506	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATAATTTTTATTTTAT	562	False	NA	8	True	AATAAA	-14	NA	128040856	128045806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.2	chr10	+	2588	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	0	-15	0	12	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTGCTAAATTTAGT	NA	False	NA	25	True	AATAAA	-31	NA	128030325	128045823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.3	chr10	+	2749	18	NIC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-79	1	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	22.5802682028077	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTATTTTATATTTTG	NA	False	NA	14	True	AATAAA	-20	NA	128030426	128045812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.4	chr10	+	2395	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	26.2676160760924	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATTTTATATTTT	NA	False	NA	13	True	AATAAA	-19	NA	128030435	128045811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156_128045308_128045378
ES.4020.5	chr10	+	2840	2	NNC	ENSMUSG00000044005.14	novel	495	3	NA	NA	-48	-1265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128030457	128033884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128031941_128032527
ES.4020.6	chr10	+	6739	18	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	-6	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.7436484449523	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTAGTCGTTCTCTTTC	NA	False	NA	36	True	AATAAA	-42	NA	128030499	128045834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128032351_128032736_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042314_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4020.7	chr10	+	2318	2	NNC	ENSMUSG00000044005.14	novel	495	3	NA	NA	-36	-1693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTAAGCTATGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	128030551	128033456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128031941_128032527
ES.4020.8	chr10	+	3333	1	FSM	ENSMUSG00000118550.2	ENSMUST00000239116.2	1524	1	-1388	-421	-1388	421	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCCAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128030551	128033884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128030600_128033900
ES.4020.9	chr10	+	2371	16	NIC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_6	28.1625440769986	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATAATTTTTATTTTAT	NA	False	NA	8	True	AATAAA	-14	NA	128030599	128045806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128039691_128039725_128039943_128040003_128040529_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ES.4021.1	chr10	+	179	1	Intergenic	novelGene_3097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTTTTTTAAAAAAGT	6752	False	NA	NA	False	NA	NA	NA	128050200	128050379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128050200_128050400
ES.4022.1	chr10	+	192	1	Intergenic	novelGene_3098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGGAAGAAAAAAGAAAA	2521	False	NA	NA	False	NA	NA	NA	128054826	128055018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128054800_128055000
ES.4023.1	chr10	+	4457	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	96.4103355772733	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6576	False	NA	18	True	AATAAA	-18	NA	128067918	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083213_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.10	chr10	+	4589	28	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-4	0	intron_retention	FALSE	canonical	3	180	junction_27	55.1032700515166	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6587	False	NA	11	True	AATAAA	-41	NA	128067929	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.100	chr10	+	4026	22	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	-949	0	intron_retention	FALSE	canonical	3	88	junction_16	72.71283561095	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	9042	False	NA	18	True	AATAAA	-18	NA	128077258	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.102	chr10	+	4874	19	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_13	52.619176901371	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	NA	False	NA	11	True	AATAAA	-41	NA	128078497	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.103	chr10	+	5749	15	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	662	0	intron_retention	FALSE	canonical	3	249	junction_10	58.6449451516218	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	NA	False	NA	11	True	AATAAA	-41	NA	128079159	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128079241_128079938_128080157_128080306_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128085302_128085389_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128087753_128087861_128087958_128088060
ES.4023.104	chr10	+	4070	17	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	1494	0	intron_retention	FALSE	canonical	3	88	junction_12	85.218102536961	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	NA	False	NA	11	True	AATAAA	-41	NA	128079991	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128087753_128087861_128087958_128088063
ES.4023.105	chr10	+	2977	18	ISM	ENSMUSG00000039994.16	ENSMUST00000105245.3	4402	29	6368	2	1805	0	3prime_fragment	FALSE	canonical	3	249	junction_12	48.4931415262664	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	NA	False	NA	18	True	AATAAA	-18	NA	128080302	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.107	chr10	+	1848	10	ISM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	17257	-80	133	0	3prime_fragment	FALSE	canonical	3	180	junction_9	77.4952009665083	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	1251	False	NA	11	True	AATAAA	-41	NA	128085214	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.109	chr10	+	3180	3	Fusion	ENSMUSG00000051716.7_ENSMUSG00000039994.16	novel	1397	2	NA	NA	-2047	0	intron_retention	FALSE	canonical	3	8	junction_2	126.5	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTGGTATTTTGAGA	1537	False	NA	NA	False	NA	NA	NA	128087917	128091514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128087958_128088060_128088148_128088461
ES.4023.110	chr10	+	1643	4	NNC	ENSMUSG00000047631.5	novel	1930	2	NA	NA	-5411	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.18993502999218	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACCCACAGTATTTATC	1534	False	NA	NA	False	ATTAAA	-11	NA	128098454	128106017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128098581_128104009_128104295_128104560_128104639_128104863
ES.4023.111	chr10	+	4031	3	NNC	ENSMUSG00000047631.5	novel	1930	2	NA	NA	-5391	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACAGTATTTATCATT	1554	False	NA	NA	False	ATTAAA	-14	NA	128098474	128106020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128100464_128103753_128104639_128104863
ES.4023.112	chr10	+	1328	3	NNC	ENSMUSG00000047631.5	novel	1930	2	NA	NA	-5378	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	2	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACAGTATTTATCATT	1567	False	NA	NA	False	ATTAAA	-14	NA	128098487	128106020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128098581_128104560_128104639_128104863
ES.4023.113	chr10	+	155	1	Intergenic	novelGene_3102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAAATCTTAA	3737	False	NA	NA	False	NA	NA	NA	128103179	128103334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128103200_128103300
ES.4023.114	chr10	+	4501	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-85	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.2548878945432	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2276	False	NA	NA	False	AATAAA	-23	NA	128106342	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118684_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.115	chr10	+	4539	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-66	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.4010906137512	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2295	False	NA	NA	False	AATAAA	-9	NA	128106361	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128121033_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.116	chr10	+	4389	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-65	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	26.6977764343895	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2296	False	NA	NA	False	AATAAA	-9	NA	128106362	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126584_128126656_128126904_128127096
ES.4023.117	chr10	+	4303	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-65	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	26.4073083771858	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTAAAACAACAACAAAGA	2296	False	NA	NA	False	AATAAA	-5	NA	128106362	128128703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126452_128126610_128126680_128126900_128127096
ES.4023.118	chr10	+	4478	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-63	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.2602916254693	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2298	False	NA	NA	False	AATAAA	-23	NA	128106364	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128118561_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.119	chr10	+	5165	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-63	3	intron_retention	FALSE	canonical	0	0	junction_12	24.6935870749955	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2298	False	NA	NA	False	AATAAA	-23	NA	128106364	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117989_128118580_128118684_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128121033_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.12	chr10	+	4066	29	NNC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	-3	-149	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	80.334147503425	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCTCAGAGCGGCCA	6588	False	NA	NA	False	ATTAAA	-18	NA	128067930	128088572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128080091_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.120	chr10	+	4470	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-63	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.2602916254693	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2298	False	NA	NA	False	AATAAA	-23	NA	128106364	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.121	chr10	+	4176	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.9152710961978	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2337	False	NA	NA	False	AATAAA	-23	NA	128106403	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.122	chr10	+	5066	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-24	3	intron_retention	FALSE	non_canonical	0	0	junction_12	21.7575800641853	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2337	False	NA	NA	False	AATAAA	-23	NA	128106403	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117989_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.123	chr10	+	5930	20	NIC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-24	-3	intron_retention	FALSE	canonical	0	0	junction_10	17.2209046448409	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGATACTGTGAGAGT	2337	False	NA	NA	False	AATAAA	-17	NA	128106403	128128715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.124	chr10	+	2156	1	Genic_Genomic	ENSMUSG00000040033.17	novel	NA	NA	NA	NA	-23	-4719	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTAAATGATTCCTAGT	2338	False	NA	NA	False	NA	NA	NA	128106404	128108560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_128106400_128108600
ES.4023.125	chr10	+	4784	21	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-23	-11	intron_retention	FALSE	non_canonical	0	0	junction_10	22.1708705286915	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2338	False	NA	NA	False	AATAAA	-9	NA	128106404	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117578_128118574_128118675_128118981_128119027_128119101_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.126	chr10	+	5022	22	NIC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-23	-11	intron_retention	FALSE	canonical	0	0	junction_12	17.0610481823177	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2338	False	NA	NA	False	AATAAA	-9	NA	128106404	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117989_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.127	chr10	+	4577	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.4010906137512	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACTGTGAGAGTGTG	2338	False	NA	NA	False	AATAAA	-20	NA	128106404	128128718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117659_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128121033_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.128	chr10	+	4358	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-23	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.1260082113001	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2338	False	NA	NA	False	AATAAA	-23	NA	128106404	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.129	chr10	+	4360	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.1260082113001	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAAGATACTGTGAGA	2340	False	NA	NA	False	AATAAA	-15	NA	128106406	128128713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117601_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.130	chr10	+	4509	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-21	-11	intron_retention	FALSE	non_canonical	0	0	junction_11	24.5595918882828	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2340	False	NA	NA	False	AATAAA	-9	NA	128106406	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.131	chr10	+	4354	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	24.1260082113001	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2341	False	NA	NA	False	AATAAA	-23	NA	128106407	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126569_128126641_128126900_128127096
ES.4023.132	chr10	+	5338	21	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-5	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	21.904052136534	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAAGATACTGTGAGA	2356	False	NA	NA	False	AATAAA	-15	NA	128106422	128128713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119019_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.133	chr10	+	4508	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-5	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	21.5660142474575	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAACAAAGATACTGTG	2356	False	NA	NA	False	AATAAA	-12	NA	128106422	128128710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.134	chr10	+	4355	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.1260082113001	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAAAGATACTGTGAG	2356	False	NA	NA	False	AATAAA	-14	NA	128106422	128128712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126584_128126900_128127096
ES.4023.135	chr10	+	4347	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	26.8164664589863	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2356	False	NA	NA	False	AATAAA	-23	NA	128106422	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117315_128117517_128117578_128118565_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.136	chr10	+	5309	21	NIC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-3	-11	intron_retention	FALSE	canonical	0	0	junction_11	16.8288442859277	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2358	False	NA	NA	False	AATAAA	-9	NA	128106424	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117989_128118580_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.137	chr10	+	4708	21	NNC	ENSMUSG00000040033.17	novel	4397	24	NA	NA	-3	-11	intron_retention	FALSE	non_canonical	0	0	junction_11	17.5282628916844	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2358	False	NA	NA	False	AATAAA	-9	NA	128106424	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117659_128118580_128118675_128118981_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.138	chr10	+	3081	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-3	-283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.2548878945432	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACCAAAGAGTCAGAACAG	2358	False	NA	NA	False	NA	NA	NA	128106424	128127383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118684_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.139	chr10	+	4348	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.538088120207	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGATACTGTGAGAGTGT	2358	False	NA	NA	False	AATAAA	-19	NA	128106424	128128717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112412_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.14	chr10	+	4398	29	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	93.2406640290138	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6597	False	NA	18	True	AATAAA	-18	NA	128067939	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076293_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.140	chr10	+	4862	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-11	intron_retention	FALSE	non_canonical	0	0	junction_10	24.9697322441525	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2359	False	NA	NA	False	AATAAA	-9	NA	128106425	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128121033_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.141	chr10	+	4323	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	21.6871175069357	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2359	False	NA	NA	False	AATAAA	-9	NA	128106425	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117601_128118580_128118675_128118981_128119027_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.142	chr10	+	4384	23	NIC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	21.2602916254693	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2359	False	NA	NA	False	AATAAA	-9	NA	128106425	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.143	chr10	+	5089	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	1	intron_retention	FALSE	non_canonical	0	0	junction_11	24.4892032206065	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACTGTGAGAGTGTGC	2359	False	NA	NA	False	AATAAA	-21	NA	128106425	128128719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.144	chr10	+	4638	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	24.4679331384184	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGATACTGTGAGAGT	2359	False	NA	NA	False	AATAAA	-17	NA	128106425	128128715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.145	chr10	+	4330	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	24.1260082113001	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGATACTGTGAGAGT	2359	False	NA	NA	False	AATAAA	-17	NA	128106425	128128715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126560_128126632_128126900_128127096
ES.4023.147	chr10	+	4888	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_10	25.1332052181004	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACTGTGAGAGTGTG	2359	False	NA	NA	False	AATAAA	-20	NA	128106425	128128718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.148	chr10	+	4363	24	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.5194582055529	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGATACTGTGAGAGT	2359	False	NA	NA	False	AATAAA	-17	NA	128106425	128128715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118684_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126536_128126584_128126900_128127096
ES.4023.149	chr10	+	4460	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.1900191151927	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2360	False	NA	NA	False	AATAAA	-9	NA	128106426	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117659_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126376_128126900_128127096
ES.4023.150	chr10	+	4426	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	2	-11	intron_retention	FALSE	non_canonical	0	0	junction_11	24.4324418525049	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2363	False	NA	NA	False	AATAAA	-9	NA	128106429	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.151	chr10	+	4463	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	26.0530688536728	156	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2363	False	NA	NA	False	AATAAA	-9	NA	128106429	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112499_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117659_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126376_128126900_128127096
ES.4023.152	chr10	+	6245	17	NIC	ENSMUSG00000040033.17	novel	4397	24	NA	NA	2	-11	intron_retention	FALSE	canonical	3	52	junction_3	8.75870103097485	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	2363	False	NA	NA	False	AATAAA	-9	NA	128106429	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128119452_128119552_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.153	chr10	+	4432	23	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	24.5791435473383	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2365	False	NA	NA	False	AATAAA	-23	NA	128106431	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127067
ES.4023.155	chr10	+	4426	23	NNC	ENSMUSG00000040033.17	novel	4397	24	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.2602916254693	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2366	False	NA	NA	False	AATAAA	-23	NA	128106432	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119077_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.156	chr10	+	4318	22	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.6871175069357	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTGAGAGTGTGCCT	2366	False	NA	NA	False	AATAAA	-23	NA	128106432	128128721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.157	chr10	+	4151	21	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-1105	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.9043670869187	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	1797	False	NA	NA	False	AATAAA	-9	NA	128112621	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114093_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117589_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.159	chr10	+	3356	12	NNC	ENSMUSG00000040033.17	novel	4397	24	NA	NA	8	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	27.1640257973788	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	6700	False	NA	NA	False	AATAAA	-9	NA	128117524	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128117589_128118580_128118675_128118981_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.16	chr10	+	4692	27	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-4	0	intron_retention	FALSE	canonical	3	88	junction_21	67.2955263730249	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6602	False	NA	11	True	AATAAA	-41	NA	128067944	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.160	chr10	+	5010	6	NNC	ENSMUSG00000040033.17	novel	4394	24	NA	NA	-323	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	34.9433827784317	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	7538	False	NA	NA	False	AATAAA	-9	NA	128118362	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128119027_128119101_128121324_128121529_128121588_128126372_128126537_128126608_128126900_128127096
ES.4023.161	chr10	+	3592	9	NIC	ENSMUSG00000040033.17	novel	4397	24	NA	NA	-26	-11	intron_retention	FALSE	canonical	3	59	junction_3	5.17052946998661	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	7835	False	NA	NA	False	AATAAA	-9	NA	128118659	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ES.4023.162	chr10	+	2656	8	NNC	ENSMUSG00000040033.17	novel	1873	8	NA	NA	-162	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	31.3824336668962	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	8989	False	NA	NA	False	AATAAA	-9	NA	128119813	128128707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128119849_128119966_128120062_128120815_128121033_128121140_128121324_128121529_128121588_128126372_128126587_128126656_128126900_128127096
ES.4023.163	chr10	+	1702	1	Genic_Genomic	ENSMUSG00000040033.17	novel	NA	NA	NA	NA	8256	1215	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128128231	128129933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_128128200_128129900
ES.4023.164	chr10	+	3950	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-5168	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0287115341174	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128134035	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128134092_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.165	chr10	+	4942	24	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-43	2	intron_retention	FALSE	canonical	2	164	junction_11	38.6293520926793	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139160	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.166	chr10	+	4461	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	-82	0	-43	0	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139160	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.167	chr10	+	4125	1	Genic_Genomic	ENSMUSG00000005682.10	novel	NA	NA	NA	NA	-29	2	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCCAAAAACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	128139174	128143299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_128139200_128143300
ES.4023.168	chr10	+	4569	25	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-20	0	intron_retention	FALSE	canonical	2	164	junction_12	38.981632961349	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139183	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.169	chr10	+	4430	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	61.4621314306623	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139186	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149619_128149715_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.170	chr10	+	4423	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.5662164102742	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139186	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144065_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.171	chr10	+	3488	2	FSM	ENSMUSG00000005682.10	ENSMUST00000219801.2	3410	2	-56	-22	-15	2	multi-exon	FALSE	canonical	3	271	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCCAAAAACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	128139188	128143299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963
ES.4023.173	chr10	+	4334	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	74.4231146889191	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139196	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150600_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156236_128156602
ES.4023.174	chr10	+	4774	25	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-6	2	intron_retention	FALSE	canonical	2	164	junction_11	40.2067573093545	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139197	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.175	chr10	+	6122	20	NNC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_7	95.8261930777718	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139197	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146682_128148746_128149613_128149710_128149911_128150065_128150428_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.176	chr10	+	4441	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	68.3928183364306	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGTGGGATTCTTTGG	NA	False	NA	17	True	AATAAA	-26	NA	128139197	128157224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.177	chr10	+	4576	25	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-6	0	intron_retention	FALSE	canonical	2	78	junction_16	49.3462820844241	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139197	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.178	chr10	+	4370	26	FSM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	-48	-6	-6	0	multi-exon	FALSE	canonical	2	23	junction_2	56.9842083388021	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139197	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.179	chr10	+	4283	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_22	75.6504089546117	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139197	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154813_128154908_128156116_128156315_128156602
ES.4023.180	chr10	+	4319	26	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	56.8384939983459	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139198	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.181	chr10	+	4447	26	FSM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	-2	0	-2	0	multi-exon	FALSE	canonical	2	78	junction_17	49.8603810655314	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139201	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.182	chr10	+	4327	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	69.3172417223882	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139202	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.183	chr10	+	4454	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	66.7660512536124	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACCGCTAGTGTGGG	NA	False	NA	8	True	AATAAA	-17	NA	128139204	128157215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139358_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.184	chr10	+	4561	25	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	2	intron_retention	FALSE	canonical	2	30	junction_11	56.7762268080185	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139205	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.185	chr10	+	4389	26	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_2	63.6982134757326	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139205	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.186	chr10	+	4228	25	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	13	junction_22	58.6538663829305	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAACCGCTAGTGTGG	NA	False	NA	7	True	AATAAA	-16	NA	128139205	128157214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154813_128154908_128156116_128156315_128156602
ES.4023.188	chr10	+	4043	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	3	-378	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	57.2123902664449	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTGACCCAGGTGGAG	NA	False	NA	NA	False	NA	NA	NA	128139206	128156838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.189	chr10	+	5370	22	NIC	ENSMUSG00000005682.10	novel	5051	24	NA	NA	4	2	intron_retention	FALSE	canonical	2	24	junction_2	58.3796317725257	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139207	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.19	chr10	+	4984	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	8	junction_28	78.4298318269787	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6604	False	NA	17	True	AATAAA	-17	NA	128067946	128088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128087753_128087861_128087958_128088060_128088148_128088461
ES.4023.190	chr10	+	5896	21	NIC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	4	0	intron_retention	FALSE	canonical	2	164	junction_11	38.2568948034207	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139207	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.191	chr10	+	4833	24	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	6	-1	intron_retention	FALSE	canonical	1	1	junction_1	72.7322822213538	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACCGCTAGTGTGGG	NA	False	NA	8	True	AATAAA	-17	NA	128139209	128157215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139358_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.193	chr10	+	6075	21	NNC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	7	-1	intron_retention	FALSE	canonical	1	1	junction_8	89.2193224587589	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACCGCTAGTGTGGG	NA	False	NA	8	True	AATAAA	-17	NA	128139210	128157215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128147719_128147749_128148746_128149613_128149710_128149911_128150048_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128154908_128156116_128156315_128156602
ES.4023.194	chr10	+	4222	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_25	70.9100387815435	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139210	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156236_128156602
ES.4023.195	chr10	+	4454	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	7	0	intron_retention	FALSE	canonical	2	11	junction_16	59.0916043811076	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139210	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151470_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.196	chr10	+	4727	18	NIC	ENSMUSG00000005682.10	novel	5051	24	NA	NA	7	-2747	intron_retention	FALSE	canonical	3	24	junction_2	59.7395732240911	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTCCGACCATCTTC	NA	False	NA	NA	False	AATATA	-18	NA	128139210	128154469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031
ES.4023.197	chr10	+	4323	26	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	63.5704333790482	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAAAACCGCTAGTGTG	NA	False	NA	6	True	AATAAA	-15	NA	128139212	128157213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.198	chr10	+	4321	26	NNC	ENSMUSG00000005682.10	novel	4316	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	70.4708280070555	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139213	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146066_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.199	chr10	+	4391	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	11	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	67.3171122375284	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139214	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149522_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.20	chr10	+	4557	28	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_6	91.1119843378811	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6605	False	NA	11	True	AATAAA	-41	NA	128067947	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077284_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.200	chr10	+	4173	25	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_22	70.4772298728856	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139214	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154813_128154908_128156116_128156315_128156602
ES.4023.201	chr10	+	4277	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.4141175554191	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139216	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140239_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.203	chr10	+	4465	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_8	77.9862768376591	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139216	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146682_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.204	chr10	+	4448	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	63.8948386021907	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGGATTCTTTGGCT	NA	False	NA	19	True	AATAAA	-28	NA	128139216	128157226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.205	chr10	+	4295	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	75.4133781235133	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139216	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146066_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.206	chr10	+	4248	25	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	2	combination_of_known_splicesites	FALSE	canonical	2	13	junction_22	65.0023503848557	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139216	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154813_128154908_128156116_128156315_128156602
ES.4023.208	chr10	+	4538	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_12	75.5098871377488	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139216	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150065_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151360_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.209	chr10	+	7445	21	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	2	intron_retention	FALSE	canonical	2	164	junction_8	41.4341344787121	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139216	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.210	chr10	+	4076	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	-26	329	13	-323	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTGTACAAAAGAGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	128139216	128156893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.212	chr10	+	1989	3	NNC	ENSMUSG00000005682.10	novel	1601	3	NA	NA	13	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAATAAAAAAGACCAAG	NA	False	NA	NA	False	NA	NA	NA	128139216	128143253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140993_128142417
ES.4023.213	chr10	+	4389	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.133544364208	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139216	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150065_128150186_128150316_128150428_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.215	chr10	+	4227	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_25	72.6208124438167	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAGAAAACCGCTAGTG	NA	False	NA	4	True	AATAAA	-13	NA	128139216	128157211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151470_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156236_128156602
ES.4023.216	chr10	+	4453	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	66.9560572315903	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139216	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151623_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.217	chr10	+	4458	25	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	14	0	intron_retention	FALSE	canonical	2	24	junction_2	63.9058416517788	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139217	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.218	chr10	+	5006	25	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	14	0	intron_retention	FALSE	canonical	2	164	junction_12	40.8681611676158	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139217	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.219	chr10	+	4377	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	58.7782272614614	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139217	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146066_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.220	chr10	+	4380	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.1179977220956	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139219	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139325_128139968_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.221	chr10	+	4242	26	NNC	ENSMUSG00000005682.10	novel	4316	26	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	70.529267683707	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139220	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.222	chr10	+	2652	2	NNC	ENSMUSG00000005682.10	novel	1601	3	NA	NA	-10	2	intron_retention	FALSE	canonical	1	1	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCCAAAAACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	128139221	128143299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128140995_128142420
ES.4023.224	chr10	+	4808	24	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_11	76.7943267438279	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139226	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144963_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150065_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.225	chr10	+	5027	24	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-5	0	intron_retention	FALSE	canonical	2	9	junction_13	72.8162095832503	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139226	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150048_128150186_128150316_128150428_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.226	chr10	+	4993	24	NNC	ENSMUSG00000005682.10	novel	5051	24	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_16	83.2595867763595	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139226	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150424_128150594_128150694_128150791_128150863_128150966_128151166_128151470_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.227	chr10	+	5382	23	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-5	0	intron_retention	FALSE	canonical	2	9	junction_12	74.8525409893477	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139226	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150428_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.228	chr10	+	4910	24	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-5	0	intron_retention	FALSE	canonical	2	30	junction_11	63.7251601037278	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139226	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150048_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.229	chr10	+	4797	24	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	164	junction_12	37.6863485836081	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139232	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.230	chr10	+	4365	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	60.7032651510609	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139233	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151401_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.231	chr10	+	5745	22	NNC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	2	0	intron_retention	FALSE	canonical	2	5	junction_18	74.7520466657979	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139233	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150048_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153762_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.233	chr10	+	4435	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	84.8523800491182	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACCGCTAGTGTGGG	NA	False	NA	8	True	AATAAA	-17	NA	128139233	128157215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146682_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.234	chr10	+	4381	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.8379355336783	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139233	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144479_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.235	chr10	+	4252	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.9749511983162	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139233	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150348_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.236	chr10	+	5616	22	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	2	0	intron_retention	FALSE	canonical	2	171	junction_2	36.3801421001764	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139233	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.237	chr10	+	4907	23	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	4	0	intron_retention	FALSE	canonical	2	24	junction_2	58.6421596853491	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139235	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.238	chr10	+	5415	23	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_5	62.9086967933004	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139235	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144963_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.239	chr10	+	4403	25	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	72.8013731364701	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139235	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139337_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.24	chr10	+	3932	25	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	99.8133588114448	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6605	False	NA	11	True	AATAAA	-41	NA	128067947	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.240	chr10	+	5933	21	NIC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	-4	2	intron_retention	FALSE	canonical	2	164	junction_10	38.7045216996671	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139238	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.241	chr10	+	5498	24	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	-3	0	intron_retention	FALSE	canonical	1	1	junction_8	77.089347421173	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139239	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128147719_128147749_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.243	chr10	+	6568	24	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_15	77.2878888919615	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139240	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144963_128145174_128146039_128146383_128146572_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151360_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.245	chr10	+	4391	26	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.7196310924235	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139243	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139358_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.246	chr10	+	1683	2	FSM	ENSMUSG00000005682.10	ENSMUST00000219801.2	3410	2	-1	1728	1	-1728	multi-exon	FALSE	canonical	3	271	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTTTTTGTAAGACCT	NA	False	NA	NA	False	AATATA	-13	NA	128139243	128141549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128139341_128139963
ES.4023.247	chr10	+	4701	24	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	78	junction_15	50.2898592490497	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139243	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.248	chr10	+	4650	24	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	171	junction_2	36.4400743277677	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139243	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.25	chr10	+	4287	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	76.2979859043555	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6605	False	NA	17	True	AATAAA	-17	NA	128067947	128088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128080091_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.250	chr10	+	5004	23	NIC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	1	0	intron_retention	FALSE	canonical	2	171	junction_2	35.7177005451275	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139243	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.252	chr10	+	3995	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.1464447857402	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139244	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154035_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.253	chr10	+	4304	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.3971053373591	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139244	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144318_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.254	chr10	+	5386	23	NIC	ENSMUSG00000005682.10	novel	5051	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	24	junction_2	65.9770182878005	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139245	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128139341_128139963_128140259_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.256	chr10	+	5218	24	NNC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	11	junction_16	60.7668076743697	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAACCGCTAGTGTGG	NA	False	NA	7	True	AATAAA	-16	NA	128139263	128157214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151470_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.257	chr10	+	4351	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	65.1098026413842	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128139266	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146066_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.258	chr10	+	4315	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6682688546122	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139446	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139472_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.259	chr10	+	4344	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	253	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.8985381006192	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACCGCTAGTGTGGG	NA	False	NA	8	True	AATAAA	-17	NA	128139519	128157215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128139563_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.260	chr10	+	4276	25	ISM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	720	6	696	0	3prime_fragment	FALSE	canonical	2	164	junction_11	40.5560097957819	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139962	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.263	chr10	+	3896	25	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	1030	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	66.3315404908471	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128140296	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156236_128156602
ES.4023.264	chr10	+	4225	22	NNC	ENSMUSG00000005682.10	novel	4379	26	NA	NA	4745	0	intron_retention	FALSE	canonical	3	10	junction_21	62.1042938182023	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128144011	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156236_128156602
ES.4023.265	chr10	+	3241	20	ISM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	6792	0	6771	0	3prime_fragment	FALSE	canonical	2	164	junction_6	41.8484933885554	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128146037	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.266	chr10	+	4191	9	NIC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	9816	0	intron_retention	FALSE	canonical	0	0	junction_8	91.8435320259407	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128149082	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156602
ES.4023.267	chr10	+	4138	11	NIC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	9873	0	intron_retention	FALSE	canonical	2	164	junction_1	44.9867758346828	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128149139	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128149911_128150051_128150424_128150594_128150694_128150791_128150863_128150966_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156315_128156602
ES.4023.268	chr10	+	2723	16	ISM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	10148	4	10085	2	3prime_fragment	FALSE	canonical	2	78	junction_7	58.6571962052966	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGCTAGTGTGGGATT	NA	False	NA	11	True	AATAAA	-20	NA	128149351	128157218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ES.4023.269	chr10	+	3208	11	NNC	ENSMUSG00000005682.10	novel	4759	25	NA	NA	10747	0	intron_retention	FALSE	canonical	3	10	junction_10	80.4679439280015	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128150013	128157222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128150424_128150594_128150694_128150791_128150863_128150966_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154908_128156116_128156236_128156602
ES.4023.27	chr10	+	4945	24	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-1	0	intron_retention	FALSE	canonical	3	249	junction_20	43.5210658854238	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6605	False	NA	18	True	AATAAA	-18	NA	128067947	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086682_128087538_128087958_128088060
ES.4023.271	chr10	+	3266	1	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	14684	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128153950	128157216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128154000_128157200
ES.4023.28	chr10	+	4331	28	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	-1	0	intron_retention	FALSE	canonical	3	8	junction_27	91.0865820639833	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6605	False	NA	18	True	AATAAA	-18	NA	128067947	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080699_128081954_128082081_128082177_128082330_128083021_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060_128088148_128088461
ES.4023.29	chr10	+	5603	26	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	261	junction_25	45.5953330945175	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128085302_128085389_128085511_128085596_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.30	chr10	+	4486	29	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	90.4972093379635	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075923_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.34	chr10	+	4525	28	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	180	junction_27	53.9958338076847	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6606	False	NA	18	True	AATAAA	-18	NA	128067948	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.37	chr10	+	6433	24	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	0	intron_retention	FALSE	canonical	3	249	junction_21	46.1608513417739	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128087958_128088060
ES.4023.39	chr10	+	4418	29	NNC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	81.8393383154969	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080147_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.4	chr10	+	4467	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	-9	-1	-9	1	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTCTTCCTCCT	6582	False	NA	21	True	AATAAA	-21	NA	128067924	128088811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.40	chr10	+	4778	27	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	2	0	intron_retention	FALSE	canonical	3	249	junction_21	48.0965037049374	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.41	chr10	+	4409	29	NNC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.4381950785082	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077219_128077444_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.42	chr10	+	4656	27	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	2	0	intron_retention	FALSE	canonical	3	88	junction_21	66.7399794131749	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.44	chr10	+	4125	30	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_29	77.0709017731005	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTGTTGTCTTCCTC	6608	False	NA	19	True	AATAAA	-19	NA	128067950	128088809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060_128088148_128088461
ES.4023.45	chr10	+	4419	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_24	77.4098224532578	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGTTGTCTTCCTCC	6608	False	NA	20	True	AATAAA	-20	NA	128067950	128088810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086311_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.46	chr10	+	3965	27	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	80.4030987215273	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086164_128087648_128087753_128087861_128087958_128088060
ES.4023.48	chr10	+	4421	29	NNC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	82.0934634102733	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6608	False	NA	11	True	AATAAA	-41	NA	128067950	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086160_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.51	chr10	+	6253	27	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	-3	intron_retention	FALSE	canonical	3	40	junction_1	76.0553850666285	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTTTTGTTGTCTT	6608	False	NA	15	True	AATAAA	-45	NA	128067950	128088805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.53	chr10	+	5499	27	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	2	-3	intron_retention	FALSE	canonical	3	249	junction_22	48.0792768654576	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGACTTTTGTTGTCTT	6608	False	NA	15	True	AATAAA	-45	NA	128067950	128088805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128087753_128087861_128087958_128088060
ES.4023.54	chr10	+	3445	22	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.576159416921	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6608	False	NA	18	True	AATAAA	-18	NA	128067950	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075808_128079182_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.55	chr10	+	5103	27	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_10	80.6570282927517	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6611	False	NA	11	True	AATAAA	-41	NA	128067953	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079933_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128084377_128085215_128085302_128085389_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.56	chr10	+	4504	28	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	-4	0	intron_retention	FALSE	canonical	3	180	junction_27	53.9958338076847	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6611	False	NA	11	True	AATAAA	-41	NA	128067953	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.57	chr10	+	5147	29	Fusion	ENSMUSG00000051716.7_ENSMUSG00000039994.16	novel	4457	29	NA	NA	-4	-12	intron_retention	FALSE	canonical	0	0	junction_28	77.9324259227446	591	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTCTGTATTTGTTCT	6611	False	NA	NA	False	NA	NA	NA	128067953	128091502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060_128088148_128090303
ES.4023.58	chr10	+	3600	22	NNC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	89.7518372527796	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6612	False	NA	11	True	AATAAA	-41	NA	128067954	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075858_128079069_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.59	chr10	+	4115	25	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_22	81.9373066571157	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGAGACTTTTGTT	6612	False	NA	10	True	AATAAA	-40	NA	128067954	128088800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085980_128087640_128087753_128087861_128087958_128088060
ES.4023.62	chr10	+	4575	27	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	8	junction_26	92.3509273747819	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6612	False	NA	17	True	AATAAA	-17	NA	128067954	128088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060_128088148_128088461
ES.4023.65	chr10	+	4424	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	95.7177171559739	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6613	False	NA	11	True	AATAAA	-41	NA	128067955	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088054
ES.4023.67	chr10	+	4424	29	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	89.6870409040372	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGAGACTTTTGTT	6615	False	NA	10	True	AATAAA	-40	NA	128067957	128088800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088056
ES.4023.68	chr10	+	4767	26	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	180	junction_25	56.4606199044963	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6615	False	NA	11	True	AATAAA	-41	NA	128067957	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.70	chr10	+	4758	26	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	-1	intron_retention	FALSE	canonical	3	180	junction_25	56.5845774040948	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6615	False	NA	17	True	AATAAA	-17	NA	128067957	128088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.72	chr10	+	4394	29	NNC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	108.08691230785	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6616	False	NA	11	True	AATAAA	-41	NA	128067958	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082321_128083031_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085295_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.74	chr10	+	4993	28	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	1	0	intron_retention	FALSE	canonical	3	249	junction_22	47.2763814332972	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6616	False	NA	11	True	AATAAA	-41	NA	128067958	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.76	chr10	+	4278	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	25	154	1	-65	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGGTAGTGTGAGCT	6616	False	NA	NA	False	ATTAAA	-16	NA	128067958	128088656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.77	chr10	+	4680	34	Fusion	ENSMUSG00000005682.10_ENSMUSG00000039994.16	novel	4385	29	NA	NA	1	384	multi-exon	FALSE	non_canonical	0	0	junction_29	137.067215217948	1079	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTATATAAACCATTTT	6616	False	NA	NA	False	NA	NA	NA	128067958	128143681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063_128088813_128103335_128103382_128113384_128113472_128129933_128129970_128143255_128143301_128143643
ES.4023.79	chr10	+	4967	30	Fusion	ENSMUSG00000051716.7_ENSMUSG00000039994.16	novel	4457	29	NA	NA	1	-9	multi-exon	FALSE	canonical	0	0	junction_27	96.8293668173049	591	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTATTTGTTCTGGT	6618	False	NA	NA	False	NA	NA	NA	128067960	128091505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087863_128087958_128088060_128088148_128090303
ES.4023.8	chr10	+	4631	27	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	-5	0	intron_retention	FALSE	canonical	3	180	junction_26	54.6728435558752	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6586	False	NA	18	True	AATAAA	-18	NA	128067928	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.80	chr10	+	4562	27	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	3	-32	intron_retention	FALSE	canonical	3	249	junction_21	48.0738614409759	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCAGCTTGATAATA	6620	False	NA	-21	True	AATAAA	-9	NA	128067962	128088769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.81	chr10	+	4731	27	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	4	0	intron_retention	FALSE	canonical	3	180	junction_26	52.4829078967789	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6621	False	NA	11	True	AATAAA	-41	NA	128067963	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087958_128088063
ES.4023.85	chr10	+	4367	29	NNC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	6	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.0742697402507	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCAGCTTGATAATA	6623	False	NA	-21	True	AATAAA	-9	NA	128067965	128088769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076366_128076469_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.86	chr10	+	4626	28	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	6	-1	intron_retention	FALSE	canonical	3	88	junction_22	65.7854933746487	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTGTCTTCC	6623	False	NA	17	True	AATAAA	-17	NA	128067965	128088807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.93	chr10	+	5198	26	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	-9	-68	intron_retention	FALSE	canonical	3	88	junction_20	72.7824154586807	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGCTTGGTAGTGTGA	6651	False	NA	NA	False	ATTAAA	-13	NA	128067993	128088653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.94	chr10	+	4491	28	ISM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	60	9	-9	0	intron_retention	FALSE	canonical	3	249	junction_23	44.9361076673404	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6651	False	NA	11	True	AATAAA	-41	NA	128067993	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861
ES.4023.95	chr10	+	5706	27	NNC	ENSMUSG00000039994.16	novel	2320	13	NA	NA	180	0	intron_retention	FALSE	canonical	0	0	junction_1	106.294861743812	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTTGTTGTCTTCCT	6840	False	NA	18	True	AATAAA	-18	NA	128068182	128088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128069613_128075702_128075867_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.96	chr10	+	5755	29	NNC	ENSMUSG00000039994.16	novel	2320	13	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.5174115058218	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGTTGTCTTCCTCC	6858	False	NA	20	True	AATAAA	-20	NA	128068200	128088810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128069613_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ES.4023.97	chr10	+	5715	30	NNC	ENSMUSG00000039994.16	novel	2320	13	NA	NA	228	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.00276961007	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	14	False	NA	11	True	AATAAA	-41	NA	128068230	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128069276_128072725_128073068_128075702_128075867_128076006_128076158_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ES.4023.98	chr10	+	7121	19	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	-511	0	intron_retention	FALSE	canonical	3	249	junction_15	50.2735725681539	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	7542	False	NA	11	True	AATAAA	-41	NA	128075758	128088801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128085980_128086153_128086332_128086414_128086484_128086562_128087958_128088060
ES.4024.1	chr10	+	1076	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	-58	365	-58	1	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTTGTCTTTTTTT	NA	False	NA	34	True	AATGAA	-30	NA	128158269	128163057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4024.2	chr10	+	815	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	-58	6	-49	-6	multi-exon	FALSE	canonical	3	76	junction_1	1015.96602305392	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACAAACTGTGTTGTC	NA	False	NA	27	True	AATGAA	-23	NA	128158278	128163050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4024.4	chr10	+	1319	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	71	-7	-15	7	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGTGTGTACTTAATGA	NA	False	NA	NA	False	NA	NA	NA	128158398	128163429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4024.5	chr10	+	1488	5	ISM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	68	6	-9	-6	3prime_fragment	FALSE	canonical	3	1395	junction_1	685.497036828023	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACAAACTGTGTTGTC	NA	False	NA	27	True	AATGAA	-23	NA	128158404	128163050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4024.6	chr10	+	979	6	NNC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	205	junction_1	975.319024729857	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAACTGTGTTGTCTTTT	NA	False	NA	31	True	AATGAA	-27	NA	128158404	128163054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128158686_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4024.7	chr10	+	3993	3	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	-2	1	intron_retention	FALSE	canonical	3	2499	junction_1	261.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGTTGTCTTTTTTT	NA	False	NA	34	True	AATGAA	-30	NA	128158411	128163057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128162137_128162445_128162543_128162886
ES.4024.8	chr10	+	868	6	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	1028.12695714099	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACAAACTGTGTTGTC	NA	False	NA	27	True	AATGAA	-23	NA	128158413	128163050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128158588_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ES.4025.10	chr10	-	6860	1	Antisense	novelGene_ENSMUSG00000040054.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGCATACCTTCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	127961762	127954902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127954900_127961800
ES.4025.11	chr10	-	4926	8	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	38280	-4055	-695	2506	3prime_fragment	FALSE	canonical	3	285	junction_5	15.7194796611188	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACGTGGAAACTTGTTGG	NA	False	NA	NA	False	TATAAA	-21	NA	127974068	127964920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986
ES.4025.14	chr10	-	5544	12	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-159	2088	intron_retention	FALSE	canonical	0	0	junction_8	92.4458295703959	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012507	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979416_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.15	chr10	-	5461	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	16	2088	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	102.033507901541	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128016150	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128015661_128015715_128015817
ES.4025.16	chr10	-	5147	12	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-121	2088	combination_of_known_splicesites	FALSE	canonical	2	10	junction_9	88.1342889717843	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012469	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127982470_127982530_127987051_127987225_128012218
ES.4025.17	chr10	-	5408	14	FSM	ENSMUSG00000040043.18	ENSMUST00000099139.9	3302	14	-18	-2088	-18	2088	multi-exon	FALSE	canonical	3	28	junction_13	100.648665396784	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128016184	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128015661_128015715_128015817
ES.4025.18	chr10	-	5854	10	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-153	2088	intron_retention	FALSE	canonical	2	10	junction_7	95.9235806949122	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012501	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127982470_127982530_127987051_127987225_128012218
ES.4025.19	chr10	-	5388	12	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	3	2088	intron_retention	FALSE	canonical	3	274	junction_8	21.7061517730202	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012345	127965338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.2	chr10	-	3131	3	Antisense	novelGene_ENSMUSG00000118550.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	636	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128103787	127897210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127900272_128058800_128058828_128103744
ES.4025.21	chr10	-	5341	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-122	2086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	113.112239382946	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTAGTGTCATCCATG	NA	False	NA	-4	True	AATAAA	-13	NA	128012470	127965340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970264_127970368_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.24	chr10	-	5369	13	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-125	2084	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	113.509513796079	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTCTAGTGTCATCCA	NA	False	NA	-6	True	AATAAA	-11	NA	128012473	127965342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969747_127969959_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.25	chr10	-	4369	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	51	1031	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_13	102.033507901541	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTATTTGCTGAGGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	128016115	127966395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128015661_128015715_128015817
ES.4025.27	chr10	-	3440	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-190	433	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_13	80.9962377678394	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTTTAGGTTTTTCT	NA	False	NA	NA	False	TTTAAA	-9	NA	128012538	127966993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
ES.4025.29	chr10	-	655	1	ISM	ENSMUSG00000040043.18	ENSMUST00000238843.2	3380	15	47821	264	1759	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGAGAATGGACTGAG	NA	False	NA	NA	False	NA	NA	NA	127968345	127967690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_127967700_127968300
ES.4025.3	chr10	-	989	2	Antisense	novelGene_ENSMUSG00000118550.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAACAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128058873	127899355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_127900272_128058800
ES.4025.30	chr10	-	2620	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-162	-977	-162	-572	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTATTCCCTGGCAGT	NA	False	NA	NA	False	NA	NA	NA	128012510	127967998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.31	chr10	-	2058	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-118	-459	-118	459	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAATGGTCTTTTTTTC	NA	False	NA	NA	False	TTTAAA	-6	NA	128012466	127968516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.32	chr10	-	1634	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-159	6	-159	-6	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAATCGCAGTGCTGT	NA	False	NA	NA	False	TTTAAA	-8	NA	128012507	127968981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.33	chr10	-	1394	13	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-7856	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	88.5187911626051	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAATCGCAGTGCTGT	3821	False	NA	NA	False	TTTAAA	-8	NA	127987454	127968981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_127987405
ES.4025.34	chr10	-	2711	11	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-161	96	intron_retention	FALSE	canonical	3	274	junction_7	21.7080630181506	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTTGCTTTGTATT	NA	False	NA	-1	True	AAAAAG	-22	NA	128012509	127969096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969237_127969509_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.35	chr10	-	1360	13	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	13368	95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	88.5187911626051	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTTCTTGCTTTGTAT	8628	False	NA	-2	True	AAAAAG	-21	NA	127998980	127969097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_127998849
ES.4025.38	chr10	-	1570	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-129	92	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	111.161325274065	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012477	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970629_127970715_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.39	chr10	-	1389	12	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-125	92	combination_of_known_splicesites	FALSE	canonical	2	10	junction_9	88.1342889717843	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012473	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127982470_127982530_127987051_127987225_128012218
ES.4025.4	chr10	-	1210	1	Intergenic	novelGene_3081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	127900578	127899368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127899400_127900600
ES.4025.40	chr10	-	1472	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	-5292	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	119.189032675847	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128021458	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128015661_128015715_128015817_128015897_128021344
ES.4025.42	chr10	-	1603	12	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-159	92	intron_retention	FALSE	canonical	3	274	junction_8	22.2766230359159	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012507	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.43	chr10	-	1444	15	NNC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	-5256	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	106.899055951235	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128021422	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128015661_128015715_128021344
ES.4025.44	chr10	-	1595	14	NIC	ENSMUSG00000040043.18	novel	3380	15	NA	NA	-161	92	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	112.899442087499	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012509	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127971522_127971601_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.45	chr10	-	1452	13	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-159	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	88.527616532294	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAAGTTTCTTGCTTTG	NA	False	NA	-5	True	AAAAAG	-18	NA	128012507	127969100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979359_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ES.4025.47	chr10	-	169	1	Intergenic	novelGene_3088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	127972872	127972703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127972700_127972900
ES.4025.48	chr10	-	239	1	Intergenic	novelGene_3090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTATGATGTTTCATTGCA	5874	False	NA	NA	False	NA	NA	NA	128001734	128001495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128001500_128001700
ES.4025.49	chr10	-	2622	1	Intergenic	novelGene_3092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128009836	128007214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128007200_128009800
ES.4025.50	chr10	-	170	1	Intergenic	novelGene_3095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	128028103	128027933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128027900_128028100
ES.4025.51	chr10	-	2451	6	NNC	ENSMUSG00000051346.10	novel	1583	2	NA	NA	-20487	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.363911931492	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACTCTGTCTATAAAA	NA	False	NA	-4	True	AATAAA	-37	NA	128068163	128045780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128047261_128047577_128047793_128048950_128049175_128065246_128065342_128066773_128066877_128067829
ES.4025.52	chr10	-	1436	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	0	147	0	-147	multi-exon	FALSE	canonical	3	299	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTCAGTTTGGACTTG	NA	False	NA	21	True	NA	NA	NA	128047676	128045923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128047261_128047577
ES.4025.53	chr10	-	1233	1	Intergenic	novelGene_3099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128058865	128057632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128057600_128058900
ES.4025.54	chr10	-	234	1	Intergenic	novelGene_3100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGAAGCTCCCTATA	NA	False	NA	NA	False	AATAAA	-12	NA	128064058	128063824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128063800_128064100
ES.4025.55	chr10	-	543	3	Antisense	novelGene_ENSMUSG00000025389.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	0.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCGGCTCTGCAGACCT	NA	False	NA	NA	False	NA	NA	NA	128067913	128064985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128065342_128066773_128066877_128067829
ES.4025.56	chr10	-	177	1	Antisense	novelGene_ENSMUSG00000039994.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAACACTGCAG	4117	False	NA	NA	False	NA	NA	NA	128078857	128078680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128078700_128078900
ES.4025.57	chr10	-	169	1	Intergenic	novelGene_3101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATATTTAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	128096383	128096214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128096200_128096400
ES.4025.6	chr10	-	121	1	Intergenic	novelGene_3082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCAATTTTTACCTA	NA	False	NA	NA	False	NA	NA	NA	127913804	127913683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127913700_127913800
ES.4025.7	chr10	-	200	1	Intergenic	novelGene_3085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGAGACAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	127923159	127922959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127923000_127923200
ES.4025.8	chr10	-	208	1	Intergenic	novelGene_3086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGGGGTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	127935688	127935480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127935500_127935700
ES.4025.9	chr10	-	177	1	Intergenic	novelGene_3087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127941577	127941400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_127941400_127941600
ES.4026.1	chr10	-	160	1	Intergenic	novelGene_3103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	128108833	128108673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128108700_128108800
ES.4027.1	chr10	-	1429	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	-72	3	-72	-3	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTGGGTCTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	128134025	128132010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
ES.4028.1	chr10	-	1604	5	Antisense	novelGene_ENSMUSG00000005682.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCATACAGTCCAGGGTG	170	False	NA	NA	False	NA	NA	NA	128146314	128143241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128144104_128144204_128144324_128144470_128144549_128144903_128145172_128146037
ES.4029.1	chr10	-	3859	1	Antisense	novelGene_ENSMUSG00000025381.4_AS_novelGene_ENSMUSG00000005682.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATGGTGAGTGAATGA	NA	False	NA	NA	False	AATAAA	-17	NA	128158366	128154507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128154500_128158400
ES.403.1	chr1	-	749	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTTTATCTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	44865299	44864550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_44864600_44865300
ES.4030.1	chr10	+	246	1	Intergenic	novelGene_3104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	128168221	128168467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128168200_128168500
ES.4031.1	chr10	-	172	1	Intergenic	novelGene_3105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7979	False	NA	NA	False	NA	NA	NA	128168655	128168483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128168500_128168700
ES.4032.1	chr10	-	184	1	Intergenic	novelGene_3106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGAAAAAAAAAAAAGAAAA	7727	False	NA	NA	False	NA	NA	NA	128168907	128168723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128168700_128168900
ES.4033.1	chr10	+	1626	12	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	-31	-1206	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	443.284305166122	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATTAAGACTTG	NA	False	NA	-4	True	ATTAAA	-35	NA	128173571	128197142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173642_128173766_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.10	chr10	+	3551	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	12	1	intron_retention	FALSE	canonical	3	1246	junction_8	134.335493043938	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTGCTCTTACGTAA	NA	False	NA	19	True	AATAAA	-19	NA	128173614	128198349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.13	chr10	+	2917	11	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	17	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	465.488302753141	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACAATGTTTGAGCTT	NA	False	NA	7	True	AATAAA	-7	NA	128173619	128198337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195180_128195294_128195405_128195812_128196023_128196836
ES.4033.14	chr10	+	2919	11	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	458.308640546957	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTGAGCTTGCTC	NA	False	NA	11	True	AATAAA	-11	NA	128173624	128198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195016_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.15	chr10	+	8017	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	26	-5	intron_retention	FALSE	canonical	3	1246	junction_8	138.315349121018	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTTTGAGCTTGCTCTT	NA	False	NA	13	True	AATAAA	-13	NA	128173628	128198343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.16	chr10	+	3656	9	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	34	-6	intron_retention	FALSE	canonical	3	1246	junction_7	133.686608809559	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTTTGAGCTTGCTCT	NA	False	NA	12	True	AATAAA	-12	NA	128173636	128198342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128195405_128195812_128196023_128196836
ES.4033.17	chr10	+	2181	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	36	709	36	-709	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATGTTTCCTTCCAGG	NA	False	NA	NA	False	ATTAAA	-14	NA	128173638	128197639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.18	chr10	+	2850	10	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	36	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	482.37355536304	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAAGGCCTGAAAGACTC	NA	False	NA	33	True	AATAAA	-33	NA	128173638	128198363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128185621_128185673_128186301_128186444_128188565_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.19	chr10	+	2908	11	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	-37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	462.397761672783	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTGAGCTTGCTC	NA	False	NA	11	True	AATAAA	-11	NA	128173641	128198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128185593_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.2	chr10	+	2951	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	-10	-15	-10	15	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAAGGCCTGAAAGACTC	NA	False	NA	33	True	AATAAA	-33	NA	128173592	128198363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.20	chr10	+	2728	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	483.06981322004	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTGAGCTTGCTC	NA	False	NA	11	True	AATAAA	-11	NA	128173663	128198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195302_128195405_128195812_128196023_128196836
ES.4033.21	chr10	+	3901	6	ISM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	66	6073	-10	-6073	5prime_fragment	FALSE	canonical	3	1421	junction_5	41.5114442051827	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAATAGAAGAGCACT	NA	False	NA	NA	False	NA	NA	NA	128173668	128192275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891
ES.4033.22	chr10	+	2224	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	-8	-1270	intron_retention	FALSE	canonical	3	1246	junction_8	134.335493043938	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGGGCCTTTAAGACT	NA	False	NA	21	True	AATAAA	-17	NA	128173670	128197078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.24	chr10	+	2941	12	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	23	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	583.409429117726	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTGAGCTTGCTC	NA	False	NA	11	True	AATAAA	-11	NA	128173701	128198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128180796_128180918_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.25	chr10	+	205	1	FSM	ENSMUSG00000005683.9	ENSMUST00000218159.2	3003	1	2742	56	2742	-56	mono-exon	FALSE	NA	NA	NA	NA	NA	842	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGTGTGTGAAGACA	NA	False	NA	NA	False	NA	NA	NA	128176420	128176625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128176400_128176600
ES.4033.26	chr10	+	3457	1	Intergenic	novelGene_3107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128176730	128180187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128176700_128180200
ES.4033.27	chr10	+	4006	1	Intergenic	novelGene_3108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATATCGAGGAATTATTTC	NA	False	NA	NA	False	NA	NA	NA	128177315	128181321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128177300_128181300
ES.4033.28	chr10	+	166	1	Intergenic	novelGene_3110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	843	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAAAGAGCCTTT	NA	False	NA	20	True	NA	NA	NA	128184563	128184729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128184600_128184700
ES.4033.29	chr10	+	4194	4	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	19001	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	737.233718406555	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGTTTGAGCTTGCTC	2188	False	NA	11	True	AATAAA	-11	NA	128192679	128198341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128193256_128193501_128195405_128195812_128196023_128196836
ES.4033.30	chr10	+	3198	1	Genic_Genomic	ENSMUSG00000005683.9	novel	NA	NA	NA	NA	23072	1600	mono-exon	FALSE	NA	NA	NA	NA	NA	995	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAAAT	2012	False	NA	NA	False	NA	NA	NA	128196750	128199948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_+_128196800_128199900
ES.4033.31	chr10	+	1513	1	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	23155	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	989	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	2095	False	NA	16	True	AATAAA	-16	NA	128196833	128198346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128196800_128198300
ES.4033.32	chr10	+	196	2	Intergenic	novelGene_3111	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGTGCGCCACCACGCAC	5051	False	NA	NA	False	NA	NA	NA	128199789	128264040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128199935_128263989
ES.4033.33	chr10	+	344	1	Antisense	novelGene_ENSMUSG00000039914.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	5053	False	NA	NA	False	NA	NA	NA	128199791	128200135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_128199800_128200100
ES.4033.34	chr10	+	6680	28	FSM	ENSMUSG00000014498.10	ENSMUST00000014642.10	6620	28	-58	-2	-54	2	multi-exon	FALSE	canonical	1	1	junction_27	3.16617929972778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCACCGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	128212929	128229877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128213119_128213437_128213522_128213956_128214036_128214221_128214293_128215249_128215451_128216449_128216538_128216796_128216940_128217714_128217928_128218203_128218283_128218500_128218616_128218769_128218853_128218928_128219047_128219223_128219293_128219437_128219579_128219660_128219742_128221969_128222082_128222277_128222350_128222827_128223030_128223238_128223327_128223455_128223574_128224407_128224628_128224769_128224858_128224955_128225040_128225116_128225263_128225349_128225433_128225638_128225722_128225901_128225994_128226339
ES.4033.35	chr10	+	4277	29	NNC	ENSMUSG00000014498.10	novel	6620	28	NA	NA	-12	1967	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	3.3917291357967	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCCCGCCTCCAT	NA	False	NA	18	True	ATTAAA	-19	NA	128212971	128231842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128213119_128213437_128213522_128213956_128214036_128214221_128214293_128215249_128215451_128216449_128216538_128216796_128216940_128217714_128217928_128218203_128218283_128218500_128218616_128218769_128218853_128218928_128219047_128219223_128219293_128219437_128219579_128219660_128219742_128221969_128222082_128222277_128222350_128222827_128223030_128223238_128223327_128223455_128223574_128224407_128224628_128224769_128224858_128224955_128225040_128225116_128225263_128225349_128225433_128225638_128225722_128225901_128226066_128226339_128227287_128231684
ES.4033.36	chr10	+	5887	28	FSM	ENSMUSG00000014498.10	ENSMUST00000014642.10	6620	28	-12	745	-8	-745	multi-exon	FALSE	canonical	1	1	junction_27	3.16617929972778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGTGTGGAGAAGTAAAAC	NA	False	NA	NA	False	TTTAAA	-22	NA	128212975	128229130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128213119_128213437_128213522_128213956_128214036_128214221_128214293_128215249_128215451_128216449_128216538_128216796_128216940_128217714_128217928_128218203_128218283_128218500_128218616_128218769_128218853_128218928_128219047_128219223_128219293_128219437_128219579_128219660_128219742_128221969_128222082_128222277_128222350_128222827_128223030_128223238_128223327_128223455_128223574_128224407_128224628_128224769_128224858_128224955_128225040_128225116_128225263_128225349_128225433_128225638_128225722_128225901_128225994_128226339
ES.4033.37	chr10	+	681	1	Antisense	novelGene_ENSMUSG00000090761.2_AS_novelGene_ENSMUSG00000039878.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCCTGTGTCCCGCCT	5205	False	NA	14	True	ATTAAA	-15	NA	128231157	128231838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_128231200_128231800
ES.4033.38	chr10	+	2360	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-127	911	-38	1	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATGCCCTTTCTTTGGCT	188	False	NA	NA	False	AAGAAA	-39	NA	128247487	128275296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.39	chr10	+	4261	6	NIC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	-38	0	intron_retention	FALSE	canonical	1	3	junction_2	49.3582819798258	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTCTCTGAGTCTT	188	False	NA	NA	False	AATATA	-39	NA	128247487	128277310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128247695_128250987_128251171_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.40	chr10	+	1661	9	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	-13	1010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.6920133263937	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACAAACAAACAAAC	213	False	NA	NA	False	NA	NA	NA	128247512	128278320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128274329_128277907_128278042_128278160
ES.4033.41	chr10	+	1664	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-100	1580	-11	-659	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGTAGAGTGAGGCAT	215	False	NA	NA	False	AAGAAA	-18	NA	128247514	128274627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.42	chr10	+	2392	8	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_3	59.6619729845415	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	215	False	NA	NA	False	AAGAAA	-38	NA	128247514	128275295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128264926_128264987_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.43	chr10	+	2356	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	-10	-24	intron_retention	FALSE	canonical	0	0	junction_4	49.5333781964803	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAACATCAAGAA	216	False	NA	NA	False	AAGAAA	-5	NA	128247515	128275262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271512_128272336_128272473_128273176_128273281_128273951
ES.4033.44	chr10	+	3852	9	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	-7	665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	56.6920133263937	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCACAGGTGTGTCCGG	219	False	NA	NA	False	NA	NA	NA	128247518	128277975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128274329_128275381_128277405_128277507
ES.4033.45	chr10	+	3223	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	-6	0	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTAGTCACCCCCCT	220	False	NA	NA	False	AATAAA	-17	NA	128247519	128276207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
ES.4033.46	chr10	+	2310	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	221	False	NA	NA	False	AAGAAA	-38	NA	128247520	128275295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
ES.4033.47	chr10	+	1391	6	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	-5	-690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.7859417908309	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACAAAGAAATTTGTT	221	False	NA	NA	False	NA	NA	NA	128247520	128274596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247692_128264509_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.48	chr10	+	5263	8	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	0	1029	intron_retention	FALSE	non_canonical	0	0	junction_7	46.3553268409426	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATTCTAGATAAGTGCA	226	False	NA	NA	False	NA	NA	NA	128247525	128278339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128277406_128277507
ES.4033.49	chr10	+	2546	9	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	1	-24	intron_retention	FALSE	non_canonical	0	0	junction_3	63.6999803767631	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAACATCAAGAA	227	False	NA	NA	False	AAGAAA	-5	NA	128247526	128275262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128264926_128265065_128268065_128268187_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.5	chr10	+	2915	11	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	464.838208412346	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173603	128198348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189071_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.50	chr10	+	2241	7	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	1	-24	intron_retention	FALSE	canonical	1	1	junction_4	49.1711862329511	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAACATCAAGAA	227	False	NA	NA	False	AAGAAA	-5	NA	128247526	128275262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271408_128272336_128272473_128273176_128273281_128273951
ES.4033.51	chr10	+	1937	8	NIC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	3	-24	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	44.6555981818584	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAACATCAAGAA	229	False	NA	NA	False	AAGAAA	-5	NA	128247528	128275262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128274329_128274676
ES.4033.52	chr10	+	2398	8	NIC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	11	-24	intron_retention	FALSE	canonical	0	0	junction_3	59.6619729845415	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAACATCAAGAA	237	False	NA	NA	False	AAGAAA	-5	NA	128247536	128275262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128247695_128250987_128251171_128264459_128264573_128268065_128268187_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.53	chr10	+	3222	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-78	0	11	0	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTAGTCACCCCCCT	237	False	NA	NA	False	AATAAA	-17	NA	128247536	128276207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.54	chr10	+	1557	8	FSM	ENSMUSG00000025373.15	ENSMUST00000171342.3	3283	8	55	1671	-1	344	multi-exon	FALSE	canonical	0	0	junction_7	46.3553268409426	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCCAGGCTGACTACA	281	False	NA	NA	False	TATAAA	-11	NA	128247580	128275639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128274329_128275381
ES.4033.55	chr10	+	7993	8	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	-1	3814	intron_retention	FALSE	non_canonical	0	0	junction_7	46.3553268409426	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGGTGGTGCACG	281	False	NA	NA	False	NA	NA	NA	128247580	128281124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128277406_128277507
ES.4033.56	chr10	+	2356	8	NNC	ENSMUSG00000025373.15	novel	3144	7	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_3	59.6619729845415	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTTATGCCCTTTCTT	283	False	NA	NA	False	AAGAAA	-34	NA	128247582	128275291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128265633_128265730_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.58	chr10	+	4217	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	12	-1085	12	-18	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAGGGAAAGGACATT	327	False	NA	NA	False	AATATA	-21	NA	128247626	128277292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.59	chr10	+	3415	4	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	21999	921	18567	0	3prime_fragment	FALSE	canonical	3	111	junction_2	8.9566858950296	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTTCTTATGCCCT	280	False	NA	NA	False	AAGAAA	-29	NA	128269613	128275286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128271454_128272336_128272473_128273176_128273281_128273951
ES.4033.7	chr10	+	1742	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	4	1180	4	-1180	multi-exon	FALSE	canonical	3	1246	junction_9	132.722869167299	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGACCCCTTCTCCCC	NA	False	NA	22	True	TATAAA	-17	NA	128173606	128197168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.8	chr10	+	2720	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	480.328308504316	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	NA	False	NA	16	True	AATAAA	-16	NA	128173606	128198346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4033.9	chr10	+	2961	12	NNC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	581.903459659449	1002	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGCTTGCTCTTACG	NA	False	NA	16	True	AATAAA	-16	NA	128173613	128198346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128173829_128174245_128174294_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ES.4034.1	chr10	-	193	1	Intergenic	novelGene_3109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCAGGCATTTTGTTA	3243	False	NA	NA	False	NA	NA	NA	128182855	128182662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128182700_128182900
ES.4035.1	chr10	-	1652	5	NNC	ENSMUSG00000039914.7	novel	729	2	NA	NA	-5	8051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.5286668025227	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTCATGATGTTTG	6950	False	NA	NA	False	NA	NA	NA	128204855	128190917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128191839_128200273_128200376_128200891_128201085_128203875_128204023_128204566
ES.4035.10	chr10	-	1607	5	FSM	ENSMUSG00000039914.7	ENSMUST00000043211.7	1421	5	-186	0	-143	0	multi-exon	FALSE	canonical	3	7	junction_3	37.9629753839185	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCATTTTTTGAG	6796	False	NA	-3	True	AATAAA	-12	NA	128205009	128198968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201115_128203875_128204023_128204566
ES.4035.11	chr10	-	4695	3	NIC	ENSMUSG00000039914.7	novel	1307	5	NA	NA	11	-5	intron_retention	FALSE	canonical	3	22	junction_2	36	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGAATTTGTCATTTT	7256	False	NA	-8	True	AATAAA	-7	NA	128204549	128198973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128200376_128200891_128204023_128204387
ES.4035.2	chr10	-	1965	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	7	-665	7	665	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAAGTCTGCATCATGA	7252	False	NA	NA	False	AATAAA	-33	NA	128204553	128198303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
ES.4035.3	chr10	-	2072	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	17	-655	1	655	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAACATCCTGAAGTC	6956	False	NA	NA	False	AATAAA	-23	NA	128204849	128198313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
ES.4035.4	chr10	-	2127	5	FSM	ENSMUSG00000039914.7	ENSMUST00000043211.7	1421	5	-51	-655	-8	655	multi-exon	FALSE	canonical	3	7	junction_3	37.9629753839185	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAACATCCTGAAGTC	6931	False	NA	NA	False	AATAAA	-23	NA	128204874	128198313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201115_128203875_128204023_128204566
ES.4035.5	chr10	-	2708	4	NIC	ENSMUSG00000039914.7	novel	1434	5	NA	NA	-6	655	intron_retention	FALSE	canonical	3	69	junction_3	17.6320415405843	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGAACATCCTGAAGTC	6933	False	NA	NA	False	AATAAA	-23	NA	128204872	128198313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128200376_128200891_128201085_128203875_128204023_128204566
ES.4035.6	chr10	-	1622	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	-186	-2	-186	2	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCATTTTTTGAGGG	6753	False	NA	-1	True	AATAAA	-14	NA	128205052	128198966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
ES.4035.7	chr10	-	1252	4	NIC	ENSMUSG00000039914.7	novel	1434	5	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	43.5660418215839	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCATTTTTTGAGGG	6930	False	NA	-1	True	AATAAA	-14	NA	128204875	128198966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128199661_128200273_128200376_128203875_128204023_128204566
ES.4035.8	chr10	-	4405	4	NIC	ENSMUSG00000039914.7	novel	1434	5	NA	NA	-178	2	intron_retention	FALSE	canonical	3	69	junction_3	15.06283137026	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCATTTTTTGAGGG	6761	False	NA	-1	True	AATAAA	-14	NA	128205044	128198966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128199661_128200273_128200376_128200891_128204023_128204566
ES.4035.9	chr10	-	1297	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	11	-1	11	1	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTCATTTTTTGAGG	7256	False	NA	-2	True	AATAAA	-13	NA	128204549	128198967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
ES.4036.1	chr10	-	179	1	Intergenic	novelGene_3112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAGAGAGAGCAGGCTT	3473	False	NA	NA	False	NA	NA	NA	128208332	128208153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128208200_128208300
ES.4037.1	chr10	-	176	1	Intergenic	novelGene_3113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTCACTGA	2999	False	NA	NA	False	NA	NA	NA	128208806	128208630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128208600_128208800
ES.4038.1	chr10	-	1906	11	NIC	ENSMUSG00000039878.14	novel	2025	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCCATGACTACGACAG	NA	False	NA	NA	False	AATAAA	-13	NA	128236392	128231803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128232060_128232334_128232526_128232619_128232701_128232857_128233017_128233099_128233194_128233556_128233698_128233936_128234107_128234273_128234437_128235140_128235322_128235672_128236026_128236275
ES.4039.1	chr10	-	1340	7	NNC	ENSMUSG00000025374.14	novel	1130	7	NA	NA	-29	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	121.06942452806	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTGTTTCTCTCATAG	NA	False	NA	-1	True	AATAAA	-19	NA	128245634	128237257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245291
ES.4039.2	chr10	-	1134	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	-3	-1	-3	1	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGAGTCTGTGTTTCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	128245746	128237262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ES.4039.3	chr10	-	1087	8	NNC	ENSMUSG00000025374.14	novel	1130	7	NA	NA	-56	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	137.96450297679	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGAGTCTGTGTTTCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	128245661	128237262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128244936_128244975_128245115_128245218_128245604
ES.4039.4	chr10	-	1246	7	FSM	ENSMUSG00000025374.14	ENSMUST00000172348.8	612	7	-130	-504	-26	-1	multi-exon	FALSE	canonical	3	7	junction_6	118.544881327238	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGAGTCTGTGTTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	128245631	128237264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245375
ES.4039.5	chr10	-	863	5	NNC	ENSMUSG00000025374.14	novel	1371	6	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	125.416306754744	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGAGTCTGTGTTTCT	NA	False	NA	-8	True	AATAAA	-12	NA	128244691	128237264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244465_128244566
ES.4039.6	chr10	-	3818	4	ISM	ENSMUSG00000025374.14	ENSMUST00000172348.8	612	7	881	2711	92	-2701	internal_fragment	FALSE	canonical	3	289	junction_1	28.3940525853958	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACACCTGCTGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	128244620	128240479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128244090_128244184_128244267_128244403_128244476_128244566
ES.4039.7	chr10	-	5115	1	NIC	ENSMUSG00000025374.14	novel	1130	7	NA	NA	-23	-2735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128245628	128240513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128240500_128245600
ES.404.1	chr1	+	201	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGAGTCTTATCTCTCT	NA	False	NA	NA	False	ACTAAA	-18	NA	45232537	45232738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45232500_45232700
ES.4040.1	chr10	-	2884	1	Antisense	novelGene_ENSMUSG00000025373.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128267002	128264118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128264100_128267000
ES.4041.1	chr10	+	131	1	Intergenic	novelGene_3114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	849	False	NA	NA	False	NA	NA	NA	128293344	128293475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128293300_128293500
ES.4042.1	chr10	+	4797	28	FSM	ENSMUSG00000025369.16_ENSMUSG00000098957.3	ENSMUST00000105235.10	4032	28	-765	0	-124	0	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	1929	False	NA	NA	False	AAAAAG	-24	NA	128294424	128325225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.10	chr10	+	3812	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-85	806	-39	10	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTATTATTATTATTT	2582	False	NA	NA	False	AAAAAG	-34	NA	128295077	128325235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.13	chr10	+	5486	27	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-73	-2	-27	2	intron_retention	FALSE	canonical	3	73	junction_11	16.1875564014004	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2594	False	NA	48	True	TATAAA	-21	NA	128295089	128326043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.14	chr10	+	5755	26	NIC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	-24	1	intron_retention	FALSE	canonical	3	73	junction_11	15.1664893762532	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2597	False	NA	47	True	TATAAA	-20	NA	128295092	128326042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.15	chr10	+	4673	28	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	24.9622485885254	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	2600	False	NA	47	True	TATAAA	-20	NA	128295095	128326042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323959_128324764
ES.4042.16	chr10	+	5571	28	NNC	ENSMUSG00000025369.16	novel	4562	29	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_22	35.0085625426574	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	2606	False	NA	46	True	TATAAA	-19	NA	128295101	128326041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319453_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.17	chr10	+	4431	27	NNC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	-15	-182	intron_retention	FALSE	canonical	0	0	junction_16	25.9744981898211	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTTTCTAATGCC	2606	False	NA	11	True	NA	NA	NA	128295101	128325043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316762_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.18	chr10	+	1488	11	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-80	19246	-7	1242	5prime_fragment	FALSE	canonical	3	89	junction_2	8.72696969170857	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTGTCTTGTGTTTTT	2614	False	NA	NA	False	NA	NA	NA	128295109	128305979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533
ES.4042.19	chr10	+	4677	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	-66	-49	-6	-1	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGTGGGTGCCTCTG	2615	False	NA	45	True	TATAAA	-18	NA	128295110	128326040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.2	chr10	+	4230	28	FSM	ENSMUSG00000025369.16_ENSMUSG00000098957.3	ENSMUST00000026433.9	4533	28	-665	968	-51	-152	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGAGGGAAAGATGTTT	2002	False	NA	41	True	ACTAAA	-27	NA	128294497	128325073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.20	chr10	+	4040	27	NIC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	-4	0	intron_retention	FALSE	canonical	3	73	junction_11	16.0395683071363	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	2617	False	NA	NA	False	AAAAAG	-24	NA	128295112	128325225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.21	chr10	+	3998	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-45	580	1	236	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGTGTTTGTGTTTA	2622	False	NA	NA	False	NA	NA	NA	128295117	128325461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.23	chr10	+	6395	25	NIC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	4	105	intron_retention	FALSE	canonical	3	73	junction_11	15.192286054296	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCGTTCGGTACTTGG	2625	False	NA	NA	False	AGTAAA	-20	NA	128295120	128326456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.25	chr10	+	3683	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	-49	928	11	-162	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGAGAGAATAGGAGGG	2632	False	NA	31	True	ACTAAA	-17	NA	128295127	128325063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.27	chr10	+	3388	27	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	25.7012018230263	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAAGAACTTTTTTA	2639	False	NA	NA	False	AAAAAG	-15	NA	128295134	128325216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320291_128323294_128323506_128323802_128323887_128324764
ES.4042.28	chr10	+	4565	28	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	25.1042818201686	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	2658	False	NA	46	True	TATAAA	-19	NA	128295153	128326041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319020_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.29	chr10	+	5050	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	-19	-469	-5	109	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTCGGTACTTGGGTGA	2662	False	NA	NA	False	AGTAAA	-24	NA	128295157	128326460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.35	chr10	+	4855	28	NNC	ENSMUSG00000025369.16	novel	4562	29	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_21	34.2143248864396	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCCATCTTGTGGGTG	2682	False	NA	39	True	TATAAA	-12	NA	128295177	128326034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319046_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.37	chr10	+	4276	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-9	-235	4	235	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTTGTGTTTGTGTTT	2685	False	NA	NA	False	NA	NA	NA	128295180	128325460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.38	chr10	+	4945	29	NIC	ENSMUSG00000025369.16	novel	4562	29	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_18	31.70776960086	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGTGGGTGCCTCTG	2689	False	NA	45	True	TATAAA	-18	NA	128295184	128326040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.4	chr10	+	4650	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-115	-2	-69	2	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2552	False	NA	48	True	TATAAA	-21	NA	128295047	128326043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.40	chr10	+	3754	28	NNC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_27	24.9622485885254	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAACTTTTTTAAT	2695	False	NA	NA	False	AAAAAG	-17	NA	128295190	128325218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323959_128324764
ES.4042.41	chr10	+	5141	27	NIC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	1	-3	intron_retention	FALSE	canonical	3	31	junction_26	21.5751061897871	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATCTTGTGGGTGCCTC	2695	False	NA	43	True	TATAAA	-16	NA	128295190	128326038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128324229_128324764
ES.4042.42	chr10	+	4930	28	NIC	ENSMUSG00000025369.16	novel	735	8	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.6800141191831	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	2970	False	NA	46	True	TATAAA	-19	NA	128295465	128326041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128295665_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.43	chr10	+	3328	21	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	9498	543	-5409	273	3prime_fragment	FALSE	canonical	3	73	junction_4	18.6367244976149	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCGTCTGTGTACTTGTG	1272	False	NA	NA	False	NA	NA	NA	128304660	128325498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.44	chr10	+	3661	18	NNC	ENSMUSG00000025369.16	novel	865	6	NA	NA	-366	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.2997562368212	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	6315	False	NA	47	True	TATAAA	-20	NA	128309703	128326042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128309945_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.45	chr10	+	2455	18	NNC	ENSMUSG00000025369.16	novel	865	6	NA	NA	-360	-181	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	31.1099178658411	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATGTTTCTAATGCCT	6321	False	NA	12	True	NA	NA	NA	128309709	128325044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128309743_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.46	chr10	+	3339	16	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	149	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.4544124717871	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	6830	False	NA	47	True	TATAAA	-20	NA	128310218	128326042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316762_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.47	chr10	+	2552	16	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15062	823	155	-7	3prime_fragment	FALSE	canonical	3	74	junction_1	17.475570249796	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAACTTTTTTAAT	6836	False	NA	NA	False	AAAAAG	-17	NA	128310224	128325218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.48	chr10	+	5016	12	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	168	-5	intron_retention	FALSE	canonical	0	0	junction_3	35.4592071527386	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCATCTTGTGGGTGCC	6849	False	NA	41	True	TATAAA	-14	NA	128310237	128326036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128310683_128310861_128310934_128316218_128316333_128316762_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123
ES.4042.49	chr10	+	2819	15	NIC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	168	0	intron_retention	FALSE	canonical	3	76	junction_14	15.1489206189209	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	6849	False	NA	NA	False	AAAAAG	-24	NA	128310237	128325225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.5	chr10	+	4005	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-127	154	-54	-154	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAGGAGGGAAAGATGT	2567	False	NA	39	True	ACTAAA	-25	NA	128295062	128325071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.50	chr10	+	4758	12	NIC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	169	-1	intron_retention	FALSE	canonical	3	31	junction_11	25.8114587917591	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTTGTGGGTGCCTCTG	6850	False	NA	45	True	TATAAA	-18	NA	128310238	128326040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128324229_128324764
ES.4042.51	chr10	+	3291	15	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	15151	-233	271	233	3prime_fragment	FALSE	canonical	3	31	junction_14	24.434940690139	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCAGCTTTGTGTTTGTGT	6952	False	NA	NA	False	NA	NA	NA	128310340	128325458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.52	chr10	+	2539	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15178	993	271	-177	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTAATGCCTGGGA	6952	False	NA	16	True	ACTAAA	-2	NA	128310340	128325048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.53	chr10	+	3533	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15179	-2	272	2	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	6953	False	NA	48	True	TATAAA	-21	NA	128310341	128326043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.54	chr10	+	3867	15	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	15159	-817	279	1	3prime_fragment	FALSE	canonical	3	31	junction_14	24.434940690139	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGGTGCCTCTGTG	6960	False	NA	47	True	TATAAA	-20	NA	128310348	128326042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.55	chr10	+	3026	15	NNC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	291	-9	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	35.3340472909513	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAAGAACTTTTTTA	6972	False	NA	NA	False	AAAAAG	-15	NA	128310360	128325216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317954_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.57	chr10	+	4457	15	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	15203	-43	310	-7	intron_retention	FALSE	canonical	1	3	junction_5	38.6332837362409	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCCATCTTGTGGGTG	6991	False	NA	39	True	TATAAA	-12	NA	128310379	128326034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.58	chr10	+	3004	16	ISM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	15205	530	312	236	3prime_fragment	FALSE	canonical	1	3	junction_5	37.7780653583825	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGTGTTTGTGTTTA	6993	False	NA	NA	False	NA	NA	NA	128310381	128325461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.59	chr10	+	4846	12	NIC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	321	0	intron_retention	FALSE	canonical	3	100	junction_6	8.89144820823185	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	7002	False	NA	46	True	TATAAA	-19	NA	128310390	128326041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802
ES.4042.6	chr10	+	5045	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	-97	-415	-51	105	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCGTTCGGTACTTGG	2570	False	NA	NA	False	AGTAAA	-20	NA	128295065	128326456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.61	chr10	+	3776	15	ISM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	15353	-419	446	109	3prime_fragment	FALSE	canonical	3	76	junction_14	15.1489206189209	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTCGGTACTTGGGTGA	7127	False	NA	NA	False	AGTAAA	-24	NA	128310515	128326460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4042.62	chr10	+	3781	6	NIC	ENSMUSG00000025369.16	novel	4032	28	NA	NA	8219	237	intron_retention	FALSE	canonical	3	106	junction_3	11.160645142643	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGTGTTTGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	128318288	128325462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128318812_128319043_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123
ES.4042.7	chr10	+	4972	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-122	-818	-49	2	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGGTGCCTCTGTGT	2572	False	NA	48	True	TATAAA	-21	NA	128295067	128326043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ES.4042.8	chr10	+	2495	11	ISM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	-113	18272	-40	2216	5prime_fragment	FALSE	canonical	3	89	junction_2	8.72696969170857	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAGAAAA	2581	False	NA	NA	False	NA	NA	NA	128295076	128306953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533
ES.4042.9	chr10	+	3893	29	NNC	ENSMUSG00000025369.16	novel	4562	29	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	29.5577090327601	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	2581	False	NA	NA	False	AAAAAG	-24	NA	128295076	128325225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317954_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ES.4043.1	chr10	-	159	1	Intergenic	novelGene_3115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128303235	128303076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128303100_128303200
ES.4044.1	chr10	-	133	1	Intergenic	novelGene_3116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128320595	128320462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128320500_128320600
ES.4045.1	chr10	-	5936	3	NNC	ENSMUSG00000090841.3	novel	824	4	NA	NA	250	5871	intron_retention	FALSE	non_canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCAGTATGGCACATG	9318	False	NA	NA	False	NA	NA	NA	128328650	128320857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128321563_128323122_128323505_128323801
ES.4045.11	chr10	-	696	7	FSM	ENSMUSG00000090841.3	ENSMUST00000219236.2	692	7	-6	2	1	-2	multi-exon	FALSE	canonical	3	24	junction_1	1170.06704461278	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTTGGTTCTTTCTTT	8246	False	NA	-9	True	AATAAA	-16	NA	128329722	128326733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128326903_128327158_128327217_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ES.4045.14	chr10	-	2635	3	NIC	ENSMUSG00000090841.3	novel	1668	5	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	2315	junction_2	115	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTTTTGGTTCTTTCT	8264	False	NA	-11	True	AATAAA	-14	NA	128329704	128326735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128328006_128328097_128329436_128329677
ES.4045.16	chr10	-	2451	4	NIC	ENSMUSG00000090841.3	novel	1668	5	NA	NA	1	-7	intron_retention	FALSE	canonical	3	2189	junction_2	147.389129706215	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCCTCTTTTGGTTCTT	8246	False	NA	-14	True	AATAAA	-11	NA	128329722	128326738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128328006_128328097_128328272_128328470_128329436_128329677
ES.4045.2	chr10	-	689	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	-23	-1	2	1	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTCTTTCTTTCTTTCC	8201	False	NA	-3	True	AATAAA	-22	NA	128329767	128326727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ES.4045.3	chr10	-	1654	5	FSM	ENSMUSG00000090841.3	ENSMUST00000217733.2	1668	5	14	0	7	0	multi-exon	FALSE	canonical	3	2189	junction_2	245.142305610435	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8259	False	NA	-5	True	AATAAA	-20	NA	128329709	128326729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ES.4045.4	chr10	-	498	5	NIC	ENSMUSG00000090841.3	novel	691	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	1074.73679917457	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8246	False	NA	-5	True	AATAAA	-20	NA	128329722	128326729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128326903_128327927_128328006_128328097_128328272_128329407_128329436_128329677
ES.4045.5	chr10	-	706	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	-15	0	3	0	multi-exon	FALSE	canonical	3	38	junction_2	1160.32375750142	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8227	False	NA	-5	True	AATAAA	-20	NA	128329741	128326729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ES.4045.6	chr10	-	622	6	NNC	ENSMUSG00000090841.3	novel	691	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	973.337022824058	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8246	False	NA	-5	True	AATAAA	-20	NA	128329722	128326729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328595_128329407_128329436_128329677
ES.4045.7	chr10	-	620	5	FSM	ENSMUSG00000090841.3	ENSMUST00000220307.2	496	5	10	-134	3	0	multi-exon	FALSE	canonical	1	3	junction_3	1076.89228802142	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	8255	False	NA	-7	True	AATAAA	-18	NA	128329713	128326731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128326903_128327927_128328006_128328097_128328405_128329407_128329436_128329677
ES.4045.8	chr10	-	603	6	FSM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	4	1	1	-1	multi-exon	FALSE	canonical	2	43	junction_4	956.330152196405	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGGTTCTTTCTTTC	8246	False	NA	-8	True	AATAAA	-17	NA	128329722	128326732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328579_128329407_128329436_128329677
ES.4046.1	chr10	-	970	6	ISM	ENSMUSG00000039824.5	ENSMUST00000026428.4	1026	7	1266	0	1266	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.72046505340853	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGTTTCCGACAGTTTT	4680	False	NA	-10	True	AATAAA	-14	NA	128333288	128330025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128330353_128330458_128330537_128330922_128331097_128332121_128332266_128332482_128332511_128333069
ES.4047.1	chr10	+	1191	3	Intergenic	novelGene_3117	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTACAGGAGCAAATTT	NA	False	NA	NA	False	NA	NA	NA	128334813	128338831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128335396_128337503_128337559_128338277
ES.4048.1	chr10	+	2472	1	Antisense	novelGene_ENSMUSG00000025366.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGGGAAGAATTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	128351964	128354436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_128352000_128354400
ES.4049.1	chr10	+	223	1	Intergenic	novelGene_3120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	128372777	128373000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128372800_128373000
ES.405.1	chr1	+	178	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	45470556	45470734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45470600_45470700
ES.4050.1	chr10	-	4162	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-183	2	-182	-2	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGGTGCACTGTGTG	8136	False	NA	NA	False	AATATA	-19	NA	128361922	128345835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.10	chr10	-	3396	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-12482	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	45.8819862981832	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	NA	False	NA	-5	True	AATAAA	-15	NA	128374222	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128374117
ES.4050.12	chr10	-	3610	30	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-61	8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	46.1127450456817	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8257	False	NA	-5	True	AATAAA	-15	NA	128361801	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.14	chr10	-	3002	22	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-626	8	intron_retention	FALSE	canonical	3	144	junction_20	32.1462079382197	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	NA	False	NA	-5	True	AATAAA	-15	NA	128356801	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352451_128352544_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775
ES.4050.16	chr10	-	3682	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	45.7910714247027	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8322	False	NA	-5	True	AATAAA	-15	NA	128361736	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357984_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.17	chr10	-	3492	29	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-19	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	46.8911570793993	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8299	False	NA	-5	True	AATAAA	-15	NA	128361759	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355037_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.18	chr10	-	6046	30	ISM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	0	283	0	8	intron_retention	FALSE	canonical	3	144	junction_22	28.6830645613021	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8319	False	NA	-5	True	AATAAA	-15	NA	128361739	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942
ES.4050.19	chr10	-	3719	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-28	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	44.7269369495485	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8290	False	NA	-5	True	AATAAA	-15	NA	128361768	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347429_128347519_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.2	chr10	-	3967	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-105	119	-104	-119	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGTCTCTCCGACTGC	8214	False	NA	NA	False	AATAAA	-20	NA	128361844	128345952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.20	chr10	-	6330	29	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-88	8	intron_retention	FALSE	canonical	3	144	junction_21	29.1050831874252	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8230	False	NA	-5	True	AATAAA	-15	NA	128361828	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942
ES.4050.21	chr10	-	3462	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	351	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	45.5724209973044	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8672	False	NA	-5	True	AATAAA	-15	NA	128361386	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355200_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.22	chr10	-	3327	32	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	301	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	45.1387962413557	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	8622	False	NA	-5	True	AATAAA	-15	NA	128361436	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353522_128353589_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.26	chr10	-	3683	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	45.8558247844989	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAACAGTGCTTCATGAA	8322	False	NA	-11	True	AATAAA	-9	NA	128361736	128346122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357701_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.27	chr10	-	3703	30	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-110	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	46.1216661192152	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGAAAACAGTGCTTC	8208	False	NA	-16	True	AATAAA	-4	NA	128361850	128346127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355509_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.28	chr10	-	6017	29	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-128	-12	intron_retention	FALSE	canonical	1	1	junction_6	46.8539170274624	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATACAGAAAA	8190	False	NA	-25	True	AATACA	-26	NA	128361868	128346136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942
ES.4050.3	chr10	-	3879	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-28	-120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	57.5096513639233	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGTCTCTCCGACTG	8290	False	NA	NA	False	AATAAA	-19	NA	128361768	128345953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355471_128355555_128355657_128355700_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.30	chr10	-	3223	30	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	315	-12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	46.0395063770619	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATACAGAAAA	8636	False	NA	-25	True	AATACA	-26	NA	128361422	128346136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.31	chr10	-	3496	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-12485	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	57.5577873870156	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATATACAGAAAA	NA	False	NA	-25	True	AATACA	-26	NA	128374225	128346136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355200_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128374117
ES.4050.33	chr10	-	2842	21	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-406	-16	intron_retention	FALSE	canonical	3	144	junction_20	32.1683073847537	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAATAAAAAATATACAG	NA	False	NA	-29	True	AATACA	-22	NA	128356581	128346140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512
ES.4050.34	chr10	-	3789	31	NNC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-120	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.967457368882	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAATAAAAAATATACAG	8198	False	NA	-29	True	AATACA	-22	NA	128361860	128346140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128346529_128346848_128346893_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.35	chr10	-	3623	23	NIC	ENSMUSG00000025366.9	novel	3409	24	NA	NA	-128	-6	intron_retention	FALSE	canonical	3	144	junction_14	21.6583158308327	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAAATTTTTATTTA	8190	False	NA	NA	False	AATAAA	-17	NA	128361868	128350752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.36	chr10	-	137	1	Intergenic	novelGene_3118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAAAAAT	2316	False	NA	NA	False	NA	NA	NA	128367742	128367605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128367600_128367700
ES.4050.37	chr10	-	190	1	Intergenic	novelGene_3119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAGTTTAGCCCGTC	NA	False	NA	NA	False	NA	NA	NA	128371651	128371461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128371500_128371700
ES.4050.4	chr10	-	4930	26	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-2171	-120	intron_retention	FALSE	canonical	3	144	junction_19	29.6120516006575	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGTCTCTCCGACTG	NA	False	NA	NA	False	AATAAA	-19	NA	128358346	128345953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128354884_128355010_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289
ES.4050.5	chr10	-	3886	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	-183	278	-182	13	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATGAACTTGCATGCCA	8136	False	NA	0	True	AATAAA	-20	NA	128361922	128346111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.6	chr10	-	3902	30	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	-7	9	intron_retention	FALSE	canonical	3	144	junction_21	28.6574338291864	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTCATGAACTTGCAT	8311	False	NA	-4	True	AATAAA	-16	NA	128361747	128346115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ES.4050.8	chr10	-	5934	17	NIC	ENSMUSG00000025366.9	novel	3981	31	NA	NA	623	8	intron_retention	FALSE	canonical	3	166	junction_15	28.4953395312286	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCATGAACTTGCA	NA	False	NA	-5	True	AATAAA	-15	NA	128355552	128346116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467
ES.4051.1	chr10	+	171	1	Intergenic	novelGene_3121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATACAAAGATGC	146	False	NA	NA	False	NA	NA	NA	128376636	128376807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128376600_128376800
ES.4052.1	chr10	+	204	1	Intergenic	novelGene_3122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTCAGCTAGTGTCTC	466	False	NA	NA	False	NA	NA	NA	128391731	128391935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128391700_128391900
ES.4053.1	chr10	-	3716	13	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-19	18557	intron_retention	FALSE	non_canonical	0	0	junction_1	773.46627359497	1954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAAGGATGGGAGCAG	8726	False	NA	NA	False	ACTAAA	-14	NA	128401822	128375077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128375110_128375569_128375640_128394505_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445
ES.4053.11	chr10	-	920	2	FSM	ENSMUSG00000093674.8	ENSMUST00000176966.2	523	2	-38	-359	3	0	multi-exon	FALSE	canonical	3	7075	junction_1	0	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128385019	128383985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128384843_128384956
ES.4053.12	chr10	-	325	5	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8421.22701867133	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128384985	128383985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128384099_128384163_128384299_128384526_128384550_128384817_128384843_128384956
ES.4053.13	chr10	-	473	2	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	4	0	intron_retention	FALSE	canonical	3	2727	junction_1	0	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128384977	128383985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128384299_128384817
ES.4053.14	chr10	-	755	3	NNC	ENSMUSG00000093674.8	novel	680	3	NA	NA	-2454	0	intron_retention	FALSE	canonical	0	0	junction_2	11173.5	999	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128387628	128383985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128384299_128384526_128384843_128387502
ES.4053.16	chr10	-	698	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177513.2	680	3	-18	0	3	0	multi-exon	FALSE	canonical	3	7075	junction_2	7636	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128385025	128383985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128384299_128384526_128384843_128384956
ES.4053.2	chr10	-	1268	1	Genic_Genomic	ENSMUSG00000039810.12	novel	NA	NA	NA	NA	4416	7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATATTATTACCTATAC	NA	False	NA	NA	False	ATTAAA	-22	NA	128379092	128377824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128377800_128379100
ES.4053.20	chr10	-	451	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCAAACTGCTGTTAC	NA	False	NA	-28	True	AATAAA	-19	NA	128384947	128383992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128384299_128384802
ES.4053.22	chr10	-	395	4	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9325.46107290263	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATCAAACTGCTGTTA	NA	False	NA	-29	True	AATAAA	-18	NA	128384983	128383993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128384299_128384526_128384565_128384817_128384843_128384956
ES.4053.23	chr10	-	496	4	NNC	ENSMUSG00000093674.8	novel	437	4	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	590	junction_3	6881.00593421243	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAGAATCAAACTGCT	NA	False	NA	-33	True	AATAAA	-14	NA	128384983	128383997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128384299_128384404_128384550_128384817_128384841_128384956
ES.4053.24	chr10	-	987	1	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-3	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	998	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAGAATCAAACTGCT	NA	False	NA	-33	True	AATAAA	-14	NA	128384984	128383997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128384000_128385000
ES.4053.25	chr10	-	644	1	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	0	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	971	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	128384981	128384337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128384300_128385000
ES.4053.26	chr10	-	1455	2	Genic_Genomic	ENSMUSG00000112850.2	novel	1120	1	NA	NA	-944	55	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	128387626	128385507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128386839_128387502
ES.4053.27	chr10	-	2787	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-298	-6	-298	4	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTTCTCTTTGTGGT	8394	False	NA	-1	True	AATAAA	-18	NA	128402154	128393630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.28	chr10	-	4958	10	NNC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	115	2	intron_retention	FALSE	canonical	0	0	junction_9	649.786821642488	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTTCTCTTTGTG	8925	False	NA	-3	True	AATAAA	-16	NA	128401623	128393632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128400536_128400661
ES.4053.29	chr10	-	2383	11	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	618.267587699695	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	9	True	NA	-5	True	AATAAA	-14	NA	128401860	128393634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399445_128399575_128401608
ES.4053.3	chr10	-	2162	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	-45	1604	-45	1231	multi-exon	FALSE	canonical	3	75	junction_2	17	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAAAATTTCTTTGA	NA	False	NA	-12	True	AATAAA	-19	NA	128383688	128379435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128381408_128382696_128382761_128383562
ES.4053.30	chr10	-	2569	11	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	1853	junction_10	110.832486212301	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	9	True	NA	-5	True	AATAAA	-14	NA	128401860	128393634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.31	chr10	-	4541	11	ISM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-22	-2	-22	0	intron_retention	FALSE	canonical	3	1884	junction_8	103.450906230927	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	-9	True	NA	-5	True	AATAAA	-14	NA	128401878	128393634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445
ES.4053.32	chr10	-	4400	12	NNC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	600.338127865118	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	6	True	NA	-5	True	AATAAA	-14	NA	128401863	128393634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128400536_128400661
ES.4053.33	chr10	-	3546	7	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	1700	0	intron_retention	FALSE	canonical	3	1993	junction_6	66.8649135695745	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	9776	False	NA	-5	True	AATAAA	-14	NA	128400038	128393634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396607_128396787_128396852_128398695
ES.4053.35	chr10	-	5239	8	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	1884	junction_7	91.7440984033128	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTGTGTGTTCTCTTT	-9	True	NA	-6	True	AATAAA	-13	NA	128401878	128393635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396607_128396787_128396852_128398695_128398789_128398934
ES.4053.36	chr10	-	5229	10	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_9	654.154548130261	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	8767	False	NA	-7	True	AATAAA	-12	NA	128401781	128393636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128400536_128400661
ES.4053.37	chr10	-	4627	10	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	1884	junction_8	96.2455706853215	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	-9	True	NA	-7	True	AATAAA	-12	NA	128401878	128393636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399199_128399445
ES.4053.38	chr10	-	5022	7	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	1993	junction_6	53.8691831095376	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	8748	False	NA	-7	True	AATAAA	-12	NA	128401800	128393636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695
ES.4053.39	chr10	-	3398	9	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-24	-1	intron_retention	FALSE	canonical	0	0	junction_6	675.877161546386	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGTTGTGTGTTCTCT	8721	False	NA	-8	True	AATAAA	-11	NA	128401827	128393637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395402_128395950_128396164_128396527_128396607_128396787_128397283_128398596_128398789_128398934_128399575_128401608
ES.4053.4	chr10	-	2288	4	NIC	ENSMUSG00000039810.12	novel	565	5	NA	NA	-10	1229	intron_retention	FALSE	canonical	1	1	junction_1	34.8839345385363	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGTGAAAATTTCTTT	NA	False	NA	-14	True	AATAAA	-17	NA	128383622	128379437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128381408_128381709_128381904_128382696_128382761_128383562
ES.4053.40	chr10	-	1948	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-326	861	-326	-861	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCCCTCTTTCTAGCC	8366	False	NA	-3	True	AATAAA	-25	NA	128402182	128394497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.41	chr10	-	4789	6	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-28	-866	intron_retention	FALSE	canonical	3	1993	junction_5	56.8450525551697	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTCAAGCCCCTCTTTC	8664	False	NA	-8	True	AATAAA	-20	NA	128401884	128394502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128396164_128396527_128396607_128396787_128396852_128398695
ES.4053.42	chr10	-	3548	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-24	-867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	600.338127865118	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCGTCAAGCCCCTCTTT	8668	False	NA	-9	True	AATAAA	-19	NA	128401880	128394503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128400536_128400661
ES.4053.43	chr10	-	3676	11	ISM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-27	868	-27	-868	intron_retention	FALSE	canonical	3	1884	junction_8	103.450906230927	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	8665	False	NA	-10	True	AATAAA	-18	NA	128401883	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445
ES.4053.44	chr10	-	1983	11	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-4	-868	intron_retention	FALSE	canonical	3	1853	junction_10	117.066177865342	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	9	True	NA	-10	True	AATAAA	-18	NA	128401860	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.45	chr10	-	1609	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-23	-868	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	595.517928618262	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	-10	True	NA	-10	True	AATAAA	-18	NA	128401879	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401637
ES.4053.47	chr10	-	4078	8	ISM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	-1	870	-1	-868	intron_retention	FALSE	canonical	3	1993	junction_7	64.6737495244479	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	8744	False	NA	-10	True	AATAAA	-18	NA	128401804	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695
ES.4053.48	chr10	-	2735	6	NNC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	3274	-868	intron_retention	FALSE	non_canonical	0	0	junction_5	839.029296270398	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	3405	False	NA	-10	True	AATAAA	-18	NA	128398464	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128396164_128396527_128396607_128396787_128397545_128398020
ES.4053.49	chr10	-	1932	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-295	-868	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_2	584.456249378871	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCGTCAAGCCCCTCTT	8397	False	NA	-10	True	AATAAA	-18	NA	128402151	128394504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128395007_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.50	chr10	-	3958	10	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	1	-869	intron_retention	FALSE	canonical	3	1884	junction_7	106.146649080935	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTCGTCAAGCCCCTCT	8746	False	NA	-11	True	AATAAA	-17	NA	128401802	128394505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445
ES.4053.52	chr10	-	1702	13	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-22	-871	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	770.258123221618	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	-9	True	NA	-13	True	AATAAA	-15	NA	128401878	128394507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398045_128398114_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.53	chr10	-	3735	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-21	-871	intron_retention	TRUE	canonical	0	0	junction_7	803.15563573109	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	-8	True	NA	-13	True	AATAAA	-15	NA	128401877	128394507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398045_128398114_128398695_128398789_128398934_128399005_128399092_128399199_128399445
ES.4053.54	chr10	-	3688	10	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-7	-871	intron_retention	FALSE	canonical	3	1884	junction_8	96.2455706853215	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	8738	False	NA	-13	True	AATAAA	-15	NA	128401810	128394507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399199_128399445
ES.4053.55	chr10	-	3636	11	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-28	-871	intron_retention	FALSE	canonical	0	0	junction_10	629.490468553734	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCGTCGTCAAGCCCCT	8664	False	NA	-13	True	AATAAA	-15	NA	128401884	128394507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399199_128399445_128400536_128400661
ES.4053.56	chr10	-	1628	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-25	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	600.350930431045	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8667	False	NA	-17	True	AATAAA	-11	NA	128401881	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398780_128398930_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.57	chr10	-	1718	11	NIC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-22	-875	intron_retention	FALSE	canonical	3	1853	junction_10	113.212013496802	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	-9	True	NA	-17	True	AATAAA	-11	NA	128401878	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399199_128399445_128399575_128401608
ES.4053.58	chr10	-	2635	2	ISM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	4567	877	4502	-875	intron_retention	FALSE	canonical	3	2020	junction_1	0	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	4633	False	NA	-17	True	AATAAA	-11	NA	128397236	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128394841_128394930
ES.4053.6	chr10	-	2015	4	FSM	ENSMUSG00000039810.12	ENSMUST00000135226.8	757	4	-30	-1228	1	1228	multi-exon	TRUE	canonical	0	0	junction_1	45.536310297998	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGTGAAAATTTCTT	NA	False	NA	-15	True	AATAAA	-16	NA	128383642	128379438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128381101_128381198_128381408_128382696_128382761_128383562
ES.4053.60	chr10	-	1380	10	NNC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	22	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	652.71603490509	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8767	False	NA	-17	True	AATAAA	-11	NA	128401781	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398812_128399445_128399575_128401608
ES.4053.61	chr10	-	1622	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-5	-875	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	591.079178318203	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8	True	NA	-17	True	AATAAA	-11	NA	128401861	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399436_128399575_128401608
ES.4053.62	chr10	-	1627	12	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-28	-875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	594.755300748631	838	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8664	False	NA	-17	True	AATAAA	-11	NA	128401884	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396536_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.63	chr10	-	4587	6	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	11	-875	intron_retention	FALSE	canonical	3	1853	junction_5	140.727538172172	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8821	False	NA	-17	True	AATAAA	-11	NA	128401727	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394985_128395098_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.67	chr10	-	2527	9	NIC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	21	-875	intron_retention	FALSE	canonical	3	1853	junction_8	117.383918723989	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8766	False	NA	-17	True	AATAAA	-11	NA	128401782	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128394841_128394930_128394985_128395098_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.68	chr10	-	1528	11	NNC	ENSMUSG00000025364.14	novel	2483	12	NA	NA	-7	-875	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	622.922948686272	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8738	False	NA	-17	True	AATAAA	-11	NA	128401810	128394511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396609_128398667_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.7	chr10	-	2175	4	NIC	ENSMUSG00000039810.12	novel	565	5	NA	NA	13	1228	intron_retention	FALSE	canonical	1	1	junction_3	47.5908487935327	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGTGAAAATTTCTT	NA	False	NA	-15	True	AATAAA	-16	NA	128383630	128379438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128381408_128382696_128382761_128383039_128383114_128383562
ES.4053.70	chr10	-	1300	11	ISM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	-25	1298	-25	-1298	5prime_fragment	FALSE	canonical	3	1853	junction_10	120.601658363391	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGTGTGATGTTAATA	8667	False	NA	NA	False	AAAAAG	-9	NA	128401881	128394934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ES.4053.8	chr10	-	4175	1	NIC	ENSMUSG00000039810.12	novel	3721	3	NA	NA	-2	1227	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAAAGTGAAAATTTCT	NA	False	NA	-16	True	AATAAA	-15	NA	128383614	128379439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128379400_128383600
ES.4053.9	chr10	-	483	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	98	1	-45	-1	multi-exon	FALSE	canonical	3	7075	junction_3	6241.33064516071	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTTACGTGTTTTTT	NA	False	NA	-19	True	AATAAA	-28	NA	128385076	128383983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
ES.4054.16	chr10	-	5422	26	NNC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	4615	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.4059120936725	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTTTGTGGAT	NA	False	NA	-7	True	AATAAA	-14	NA	128420906	128403398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419087_128419234_128419354_128419505_128419572_128420179_128420306_128420880
ES.4054.17	chr10	-	5877	28	NNC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-911	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.7041804119668	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTTTTGTGGA	NA	False	NA	-8	True	AATAAA	-13	NA	128426432	128403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417843_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128426345
ES.4054.19	chr10	-	5960	27	NNC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-902	-8	intron_retention	FALSE	canonical	0	0	junction_1	16.9253494977593	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTTTTGTGGA	NA	False	NA	-8	True	AATAAA	-13	NA	128426423	128403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128426345
ES.4054.2	chr10	-	6052	28	NNC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-48	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.2385503478996	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	-6	True	AATAAA	-15	NA	128425569	128403397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414096_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ES.4054.20	chr10	-	5883	27	NIC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-31	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.4881618928847	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTGTTTTTGTGGA	NA	False	NA	-8	True	AATAAA	-13	NA	128425552	128403399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ES.4054.22	chr10	-	3835	28	FSM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	-6	2187	-6	-2187	multi-exon	FALSE	canonical	0	0	junction_1	16.414470513838	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCAGTGCTTCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	128425527	128405578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ES.4054.23	chr10	-	179	1	Intergenic	novelGene_3123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAATAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128415269	128415090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128415100_128415300
ES.4054.3	chr10	-	6323	28	FSM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	-313	6	-313	-6	multi-exon	FALSE	canonical	0	0	junction_1	16.414470513838	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	-6	True	AATAAA	-15	NA	128425834	128403397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ES.4054.5	chr10	-	6123	27	NIC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	-6	-6	intron_retention	FALSE	canonical	0	0	junction_1	16.726878415845	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	-6	True	AATAAA	-15	NA	128425527	128403397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ES.4054.7	chr10	-	6270	21	NIC	ENSMUSG00000018166.9	novel	6016	28	NA	NA	5181	-6	intron_retention	FALSE	canonical	0	0	junction_1	16.2385344166276	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTTTGTGGATT	NA	False	NA	-6	True	AATAAA	-15	NA	128420340	128403397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128413164_128413968_128414102_128414262_128414469_128414870_128415439_128417632_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179
ES.4055.1	chr10	+	180	1	Intergenic	novelGene_3124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGGAAGACATATGG	3788	False	NA	NA	False	NA	NA	NA	128442943	128443123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128442900_128443100
ES.4056.1	chr10	-	746	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	-53	-12	-53	9	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTTTATGTCGAGACT	NA	False	NA	0	True	NA	NA	NA	128462669	128460393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ES.4056.10	chr10	-	1964	1	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	22	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	504	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGGCATCGGAGTGTG	NA	False	NA	-14	True	NA	NA	NA	128462371	128460407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128460400_128462400
ES.4056.2	chr10	-	304	3	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	5907	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462370	128460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128460506_128461931_128462110_128462344
ES.4056.3	chr10	-	515	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	8976.03807676614	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462341	128460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128460506_128461075_128461207_128461931_128462110_128462235
ES.4056.4	chr10	-	1161	3	NIC	ENSMUSG00000025362.7	novel	681	4	NA	NA	22	0	intron_retention	FALSE	canonical	3	11844	junction_2	1651.5	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462371	128460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128460506_128461075_128462110_128462344
ES.4056.5	chr10	-	1730	2	FSM	ENSMUSG00000025362.7	ENSMUST00000219773.2	903	2	23	-850	23	0	multi-exon	FALSE	canonical	3	11844	junction_1	0	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462370	128460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128462110_128462344
ES.4056.8	chr10	-	449	4	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	8981.46125205816	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462320	128460405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128460506_128461075_128461207_128461931_128462110_128462280
ES.4057.1	chr10	+	176	1	Intergenic	novelGene_3125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAAGAACCAG	5211	False	NA	NA	False	NA	NA	NA	128464959	128465135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128465000_128465100
ES.4058.1	chr10	+	177	1	Intergenic	novelGene_3126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	1855	False	NA	NA	False	NA	NA	NA	128490956	128491133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128491000_128491100
ES.4059.1	chr10	-	5485	11	NNC	ENSMUSG00000002578.19	novel	3449	9	NA	NA	8	4	intron_retention	FALSE	canonical	0	0	junction_6	1.32664991614216	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCTTGAAGACTCC	NA	False	NA	NA	False	AATAAA	-19	NA	128505219	128466707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128470681_128471658_128471791_128472509_128472660_128476009_128476178_128476921_128477183_128478497_128478603_128479562_128479635_128479743_128479838_128481589_128481740_128487120_128487173_128504891
ES.4059.2	chr10	-	5303	10	NNC	ENSMUSG00000002578.19	novel	5251	9	NA	NA	1	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	1.47405546238018	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCTGTTTGTTCTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	128505226	128466714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128467142_128467179_128470681_128471658_128471791_128472509_128472660_128476009_128476178_128476921_128477183_128478497_128478603_128487120_128487173_128501338_128501511_128504891
ES.4059.3	chr10	-	5024	7	NIC	ENSMUSG00000002578.19	novel	5150	8	NA	NA	28	-4	intron_retention	FALSE	canonical	1	1	junction_6	0.942809041582063	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCCTGTTTGTTCTTG	NA	False	NA	NA	False	AATAAA	-11	NA	128481832	128466715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128470681_128471658_128471791_128472509_128472660_128476009_128476178_128476921_128477183_128478497_128478603_128481589
ES.4059.4	chr10	-	3745	10	NNC	ENSMUSG00000002578.19	novel	5251	9	NA	NA	69	-15	intron_retention	FALSE	canonical	0	0	junction_8	1.36986977843755	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACACAACACCTCATAA	NA	False	NA	NA	False	NA	NA	NA	128505158	128468298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128470681_128471658_128471791_128472509_128472660_128476009_128476178_128476921_128477183_128478497_128478603_128481589_128481740_128487120_128487173_128495712_128495791_128504891
ES.4059.6	chr10	-	3951	12	NNC	ENSMUSG00000002578.19	novel	3449	9	NA	NA	121	-17	intron_retention	FALSE	canonical	0	0	junction_6	1.43739893644017	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACACAACACCTCAT	NA	False	NA	NA	False	NA	NA	NA	128505106	128468300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128470681_128471658_128471791_128472509_128472660_128476009_128476178_128476921_128477183_128478497_128478603_128479562_128479635_128479743_128479838_128481589_128481740_128487120_128487173_128501338_128501511_128504891
ES.406.1	chr1	+	2386	2	Antisense	novelGene_ENSMUSG00000026042.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCATGTCTTGTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	45478226	45487001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_45478306_45484694
ES.4060.1	chr10	-	2337	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	159	1	159	-1	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGAATCTCTTGGGC	8751	False	NA	-8	True	AATAAA	-17	NA	128509783	128505763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ES.4061.1	chr10	-	3627	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-26	-421	-26	421	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAACTGGGGCTTTT	NA	False	NA	NA	False	ATTAAA	-6	NA	128532159	128512622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.10	chr10	-	2947	4	FSM	ENSMUSG00000000711.4	ENSMUST00000220593.2	1629	4	-34	-1284	-27	1284	multi-exon	FALSE	canonical	3	160	junction_3	13.5728487143349	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACGAAAAATACAGCCAGG	NA	False	NA	NA	False	AAGAAA	-2	NA	128532160	128516387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.11	chr10	-	1281	4	FSM	ENSMUSG00000000711.4	ENSMUST00000220593.2	1629	4	-63	411	-56	-411	multi-exon	FALSE	canonical	3	160	junction_3	13.5728487143349	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGTCATTGACTCTGA	NA	False	NA	NA	False	NA	NA	NA	128532189	128518082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.12	chr10	-	4908	2	Intergenic	novelGene_3127	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128528296	128522954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128526203_128526636
ES.4061.13	chr10	-	1171	1	Genic_Genomic	ENSMUSG00000000711.4	novel	NA	NA	NA	NA	-34	-13325	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCATGTTTATTGAAACT	NA	False	NA	NA	False	NA	NA	NA	128532167	128530996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128531000_128532200
ES.4061.2	chr10	-	3311	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-45	-86	-45	86	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTTTCCCTCCACCTT	NA	False	NA	NA	False	AATAAA	-16	NA	128532178	128512957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.3	chr10	-	2591	7	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	19	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	69.5908678555519	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTTTTGTTTGTCTG	NA	False	NA	NA	False	AGTAAA	-25	NA	128532107	128513034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128513176_128513747_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.4	chr10	-	3357	6	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	-15	5	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	69.0408574686033	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTGTTGTTTTGTTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	128532148	128513038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128531897
ES.4061.5	chr10	-	4552	5	NIC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	-23	5	intron_retention	FALSE	canonical	3	160	junction_4	12.3389626792531	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGACTGTTGTTTTGTTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	128532156	128513038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128515515_128517254_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.8	chr10	-	3199	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	-37	18	-37	-18	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	128532170	128513061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ES.4061.9	chr10	-	2308	3	NNC	ENSMUSG00000000711.4	novel	3180	6	NA	NA	30	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	128532096	128513061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128515170_128522719_128522878_128532054
ES.4062.1	chr10	+	2785	12	NNC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-11	-110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1784647241567	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTTGTTGCTGTTCG	NA	False	NA	8	True	AATAAA	-19	NA	128540052	128555997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128540796_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ES.4062.2	chr10	+	2176	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-31	-112	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGGCTTTTGTTGCTGTT	NA	False	NA	6	True	AATAAA	-17	NA	128541017	128555995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ES.4062.3	chr10	+	2163	12	NNC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	-29	-116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.1931382498496	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGAGGGCTTTTGTTGC	NA	False	NA	2	True	AATAAA	-13	NA	128541019	128555991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128541154_128542104_128542228_128549920_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ES.4062.4	chr10	+	2142	12	NNC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	21	-116	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	24.2002663737816	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGAGGGCTTTTGTTGC	NA	False	NA	2	True	AATAAA	-13	NA	128541069	128555991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554746_128554857_128555753
ES.4062.5	chr10	+	2180	12	NNC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	24	-116	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	21.6932026524973	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGAGGGCTTTTGTTGC	NA	False	NA	2	True	AATAAA	-13	NA	128541072	128555991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128541154_128542041_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ES.4062.6	chr10	+	2661	9	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	0	-114	intron_retention	FALSE	canonical	3	48	junction_3	9.69535971483266	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGAGGGCTTTTGTTGCTG	NA	False	NA	4	True	AATAAA	-15	NA	128542126	128555993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128554673_128554768_128554857_128555753
ES.4062.7	chr10	+	1464	6	ISM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	9569	110	9569	-110	3prime_fragment	FALSE	canonical	3	56	junction_1	10.8811764069884	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTTGTTGCTGTTCG	NA	False	NA	8	True	AATAAA	-19	NA	128551695	128555997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ES.4063.1	chr10	+	1197	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	-34	-5	-34	4	multi-exon	FALSE	canonical	3	275	junction_1	26	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCTTTGGCTCTGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	128583723	128602437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128583868_128601015_128601110_128601478
ES.4063.10	chr10	+	1521	3	ISM	ENSMUSG00000064030.16	ENSMUST00000218218.2	1143	4	-12	3	-12	-2	intron_retention	FALSE	canonical	3	5	junction_1	27.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128584384	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128584436_128586151_128586207_128601015
ES.4063.11	chr10	+	1058	3	NIC	ENSMUSG00000064030.16	novel	1143	4	NA	NA	-12	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128584384	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128584436_128586151_128586207_128601478
ES.4063.12	chr10	+	1464	2	ISM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	63	-2	-10	-2	intron_retention	FALSE	canonical	3	93	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128584386	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128584436_128601015
ES.4063.13	chr10	+	1178	4	NNC	ENSMUSG00000064030.16	novel	1143	4	NA	NA	30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.133739836817	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128584426	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128584504_128586151_128586207_128601015_128601110_128601478
ES.4063.2	chr10	+	1165	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	133.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583755	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128583868_128601015_128601117_128601478
ES.4063.4	chr10	+	1119	3	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	-2	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	7.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583755	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128583868_128586151_128586207_128601478
ES.4063.5	chr10	+	1211	4	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	137.41502424731	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583757	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128583868_128586151_128586207_128601015_128601110_128601478
ES.4063.6	chr10	+	1196	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583757	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128583908_128601015_128601110_128601478
ES.4063.7	chr10	+	1305	3	NNC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	127.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583759	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128583868_128601015_128601261_128601478
ES.4063.8	chr10	+	1523	2	ISM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	2	2	2	-2	intron_retention	FALSE	canonical	3	275	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGTCAGGCTTTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	128583759	128602430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128583868_128601015
ES.4063.9	chr10	+	1724	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	-564	-4	2	0	multi-exon	FALSE	canonical	3	93	junction_1	117	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583759	128602432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128584436_128601015_128601110_128601478
ES.4064.1	chr10	-	3148	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-29	-713	-28	708	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTAATTTCCTGGTTT	8219	False	NA	NA	False	GATAAA	-2	NA	128540928	128533099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.10	chr10	-	3973	6	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-33	5	intron_retention	FALSE	canonical	3	1013	junction_1	108.654314226357	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCTTTCATATTTATC	8214	False	NA	-11	True	ATTAAA	-25	NA	128540933	128533802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.11	chr10	-	5737	4	NIC	ENSMUSG00000025358.17	novel	2971	6	NA	NA	0	3	intron_retention	FALSE	canonical	3	1013	junction_1	120.97382637028	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTCTTTCATATTTA	8279	False	NA	-13	True	ATTAAA	-23	NA	128540868	128533804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128537314_128538281_128539697_128539794
ES.4064.12	chr10	-	2032	7	NIC	ENSMUSG00000025358.17	novel	2240	7	NA	NA	10	0	intron_retention	FALSE	canonical	3	12	junction_6	451.038215922135	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8707	False	NA	-16	True	ATTAAA	-20	NA	128540440	128533807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540356
ES.4064.13	chr10	-	3040	7	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-11	0	intron_retention	FALSE	canonical	2	3	junction_3	427.915262899353	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8236	False	NA	-16	True	ATTAAA	-20	NA	128540911	128533807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128535844_128535898_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.14	chr10	-	2187	8	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	12	junction_7	398.361542279557	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8696	False	NA	-16	True	ATTAAA	-20	NA	128540451	128533807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540356
ES.4064.15	chr10	-	4686	5	NIC	ENSMUSG00000025358.17	novel	2240	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	1013	junction_1	121.477364146577	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8204	False	NA	-16	True	ATTAAA	-20	NA	128540943	128533807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.16	chr10	-	2068	8	NNC	ENSMUSG00000025358.17	novel	2240	7	NA	NA	-5758	0	intron_retention	FALSE	canonical	0	0	junction_6	509.580740032671	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	5099	False	NA	-16	True	ATTAAA	-20	NA	128546658	128533807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128541123_128541213_128546627
ES.4064.17	chr10	-	4371	6	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	682	junction_2	206.666494623584	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGAATCTCTTTCATA	8218	False	NA	-17	True	ATTAAA	-19	NA	128540929	128533808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128535545_128535844_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.18	chr10	-	3663	7	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	682	junction_2	191.57918293315	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGAATCTCTTTCATA	8218	False	NA	-17	True	ATTAAA	-19	NA	128540929	128533808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535080_128535340_128535545_128535844_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.19	chr10	-	3262	5	NIC	ENSMUSG00000025358.17	novel	2971	6	NA	NA	-27	-2	intron_retention	FALSE	canonical	3	439	junction_1	328.135642684546	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTGAATCTCTTTCAT	8220	False	NA	-18	True	ATTAAA	-18	NA	128540927	128533809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.2	chr10	-	2318	9	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-12	532	intron_retention	FALSE	non_canonical	0	0	junction_1	482.769807983059	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAGCAAAGTTGTCTAA	8263	False	NA	NA	False	NA	NA	NA	128540884	128533275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128533291_128533809_128535080_128535340_128535545_128535844_128535898_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.20	chr10	-	6561	2	NIC	ENSMUSG00000025358.17	novel	2673	4	NA	NA	-19	2	intron_retention	FALSE	canonical	3	1149	junction_1	0	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGTGAATCTCTTTCA	8678	False	NA	-19	True	ATTAAA	-17	NA	128540469	128533810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128539697_128539794
ES.4064.21	chr10	-	2393	7	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-30	-1	intron_retention	FALSE	canonical	3	20	junction_6	448.644780298277	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8217	False	NA	-22	True	ATTAAA	-14	NA	128540930	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540479
ES.4064.22	chr10	-	4900	4	FSM	ENSMUSG00000025358.17	ENSMUST00000219601.2	2673	4	-34	-2193	-2	-1	multi-exon	FALSE	canonical	3	1015	junction_2	120.181344457264	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8245	False	NA	-22	True	ATTAAA	-14	NA	128540902	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.23	chr10	-	2423	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	32	-1	intron_retention	FALSE	canonical	3	20	junction_7	395.995464826638	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8331	False	NA	-22	True	ATTAAA	-14	NA	128540816	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540479
ES.4064.24	chr10	-	1754	8	FSM	ENSMUSG00000025358.17	ENSMUST00000219983.2	1708	8	-45	-1	6	-1	multi-exon	FALSE	canonical	0	0	junction_1	433.993745840388	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8254	False	NA	-22	True	ATTAAA	-14	NA	128540893	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128534413_128534913_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.25	chr10	-	2394	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	407.370312404539	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8253	False	NA	-22	True	ATTAAA	-14	NA	128540894	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128535850_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.26	chr10	-	2141	7	NNC	ENSMUSG00000025358.17	novel	2240	7	NA	NA	88	-1	intron_retention	FALSE	canonical	3	4	junction_1	462.934990636434	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8387	False	NA	-22	True	ATTAAA	-14	NA	128540760	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535099_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.27	chr10	-	2343	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-28	-1	intron_retention	FALSE	canonical	2	3	junction_3	406.576799482645	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8219	False	NA	-22	True	ATTAAA	-14	NA	128540928	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128535844_128535898_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.28	chr10	-	2417	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_3	407.52167840171	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	8229	False	NA	-22	True	ATTAAA	-14	NA	128540918	128533813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128535080_128535340_128535545_128535844_128535982_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.3	chr10	-	2313	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-34	532	intron_retention	FALSE	non_canonical	0	0	junction_1	433.993745840388	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAGCAAAGTTGTCTAA	8213	False	NA	NA	False	NA	NA	NA	128540934	128533275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128533295_128533815_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.30	chr10	-	2118	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-27	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	410.591111964799	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGTAGAGTGAATCTC	8220	False	NA	-24	True	ATTAAA	-12	NA	128540927	128533815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128534806_128535379_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.31	chr10	-	2204	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-6	208	-5	-206	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTTGTTGTTGTTTC	8242	False	NA	NA	False	NA	NA	NA	128540905	128534020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.32	chr10	-	2062	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-35	213	-7	-206	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTTGTTGTTGTTTC	8240	False	NA	NA	False	NA	NA	NA	128540907	128534020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.33	chr10	-	1484	5	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-29	2735	-28	-541	5prime_fragment	FALSE	canonical	3	1015	junction_2	105.157025442906	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCTGGCTGTCCTGGAA	8219	False	NA	NA	False	NA	NA	NA	128540928	128536547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.34	chr10	-	1011	5	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-13	3192	-12	224	5prime_fragment	FALSE	canonical	3	1015	junction_2	105.157025442906	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCTGAGTGAGCTCAAT	8235	False	NA	NA	False	NA	NA	NA	128540912	128537004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.4	chr10	-	2454	9	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	-29	532	intron_retention	FALSE	non_canonical	0	0	junction_1	387.75908677296	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAGCAAAGTTGTCTAA	8218	False	NA	NA	False	NA	NA	NA	128540929	128533275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128533291_128533809_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.6	chr10	-	2995	6	FSM	ENSMUSG00000025358.17	ENSMUST00000219099.2	2971	6	-11	-13	-11	8	multi-exon	FALSE	canonical	3	439	junction_2	293.827160078846	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCATATTTATCCTT	8236	False	NA	-8	True	ATTAAA	-28	NA	128540911	128533799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.7	chr10	-	3169	7	ISM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-44	-11	-43	6	intron_retention	FALSE	canonical	3	682	junction_2	229.276155662894	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTTCATATTTATCC	8204	False	NA	-10	True	ATTAAA	-26	NA	128540943	128533801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ES.4064.8	chr10	-	2481	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	-64	-11	-63	6	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTTCATATTTATCC	8184	False	NA	-10	True	ATTAAA	-26	NA	128540963	128533801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4064.9	chr10	-	2321	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	-75	-6	-47	6	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTTCATATTTATCC	8200	False	NA	-10	True	ATTAAA	-26	NA	128540947	128533801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ES.4065.1	chr10	-	181	1	Intergenic	novelGene_3128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAGTTAAA	0	True	NA	NA	False	NA	NA	NA	128549112	128548931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128548900_128549100
ES.4066.1	chr10	-	5570	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	38	-2774	38	2774	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCCCCCACATAGGGA	9780	False	NA	NA	False	NA	NA	NA	128579906	128553228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ES.4066.10	chr10	-	4183	22	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	40	0	intron_retention	FALSE	non_canonical	0	0	junction_6	25.1972715652125	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9782	False	NA	-10	True	AATAAA	-16	NA	128579904	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559124_128563932_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572542_128572588_128572877_128573014_128579664
ES.4066.12	chr10	-	2630	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	6474	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	18.9833276766388	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	5017	False	NA	-10	True	AATAAA	-16	NA	128573470	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573394
ES.4066.13	chr10	-	2694	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6472	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_23	20.7337975095794	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	5099	False	NA	-10	True	AATAAA	-16	NA	128573388	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572444_128572588_128572877_128573014_128573317
ES.4066.14	chr10	-	2835	26	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-4031	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	22.6346283380134	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	5180	False	NA	-10	True	AATAAA	-16	NA	128584755	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579862_128580676_128580726_128584720
ES.4066.15	chr10	-	4543	22	NIC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	52	junction_21	13.7025412675244	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9988	False	NA	-10	True	AATAAA	-16	NA	128579947	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ES.4066.16	chr10	-	2641	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6500	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	20.2201494144837	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTCCCGCAAGGTT	5071	False	NA	-14	True	AATAAA	-12	NA	128573416	128556006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572444_128572588_128572877_128573014_128573394
ES.4066.18	chr10	-	2210	17	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-2304	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	9267	False	NA	-17	True	AATAAA	-9	NA	128569220	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557491_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133
ES.4066.2	chr10	-	3761	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-228	864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	19.7603699920377	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTGCATATCGACAAT	9763	False	NA	NA	False	NA	NA	NA	128580172	128555138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579858_128580022
ES.4066.20	chr10	-	2859	25	NIC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	19.7603699920377	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	9192	False	NA	-17	True	AATAAA	-9	NA	128580743	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579910_128580676
ES.4066.21	chr10	-	3010	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-296	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	19.7603699920377	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	9695	False	NA	-17	True	AATAAA	-9	NA	128580240	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579910_128580022
ES.4066.22	chr10	-	2600	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6454	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_23	19.5399837278125	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	5117	False	NA	-17	True	AATAAA	-9	NA	128573370	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573317
ES.4066.23	chr10	-	2082	21	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-5657	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.8768080938565	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	5914	False	NA	-17	True	AATAAA	-9	NA	128572573	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556204_128556902_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513
ES.4066.24	chr10	-	2577	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	6507	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_23	19.5399837278125	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	5050	False	NA	-17	True	AATAAA	-9	NA	128573437	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573407
ES.4066.25	chr10	-	2798	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	19.7383642831586	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	9763	False	NA	-17	True	AATAAA	-9	NA	128579923	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567051_128567194_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ES.4066.27	chr10	-	3097	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-235	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.6735228513923	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCCCTCCCGCAAG	9756	False	NA	-17	True	AATAAA	-9	NA	128580179	128556009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557491_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566030_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572877_128573014_128579664_128579858_128580022
ES.4066.28	chr10	-	1619	9	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6427	-3320	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	22.6987747466686	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTTTCATGTTTTTCT	5144	False	NA	NA	False	NA	NA	NA	128573343	128568042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573317
ES.4066.29	chr10	-	187	1	Intergenic	novelGene_3129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCATAGG	8448	False	NA	NA	False	NA	NA	NA	128575330	128575143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128575100_128575300
ES.4066.30	chr10	-	179	1	Intergenic	novelGene_3130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTATTGGAAAAATCATAT	7921	False	NA	NA	False	AATAAA	-23	NA	128582014	128581835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128581800_128582000
ES.4066.4	chr10	-	3713	23	NNC	ENSMUSG00000025357.9	novel	2756	24	NA	NA	-573	4	intron_retention	FALSE	canonical	0	0	junction_10	30.3954650814996	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGCAAGGTTCTGAGAAT	8638	False	NA	-6	True	AATAAA	-20	NA	128581297	128555998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565521_128565743_128565818_128566030_128566129_128566473_128566573_128566936_128567057_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572588_128572877_128573014_128579664_128579910_128580676
ES.4066.6	chr10	-	2638	24	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-6347	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_23	19.3991015713857	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCAAGGTTCTGAGAA	5224	False	NA	-7	True	AATAAA	-19	NA	128573263	128555999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128573182
ES.4066.7	chr10	-	3601	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-13	3	intron_retention	FALSE	canonical	0	0	junction_4	31.3670031862926	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGCAAGGTTCTGAGAA	9198	False	NA	-7	True	AATAAA	-19	NA	128580737	128555999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557491_128558322_128558414_128559053_128559119_128559387_128559549_128563682_128563833_128563936_128564027_128564149_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572588_128572877_128573014_128579664_128579910_128580676
ES.4066.8	chr10	-	2965	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	20.8556130867022	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9764	False	NA	-10	True	AATAAA	-16	NA	128580171	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572444_128572588_128572877_128573014_128579664_128579858_128580022
ES.4066.9	chr10	-	2924	25	NNC	ENSMUSG00000025357.9	novel	2834	24	NA	NA	-255	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	19.7603699920377	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9736	False	NA	-10	True	AATAAA	-16	NA	128580199	128556002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664_128579858_128580022
ES.4067.1	chr10	-	1327	1	Intergenic	novelGene_3131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTCTAGAGATGGCTAG	1204	False	NA	NA	False	AATAAA	-43	NA	128588731	128587404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128587400_128588700
ES.4068.1	chr10	-	3578	1	Antisense	novelGene_ENSMUSG00000064030.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128605982	128602404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128602400_128606000
ES.4069.1	chr10	-	114	1	Intergenic	novelGene_3132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTGATAAGAGGA	NA	False	NA	NA	False	AATAAA	-10	NA	128607974	128607860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128607900_128608000
ES.407.1	chr1	+	6911	2	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGGTTTCCATACAAGAC	NA	False	NA	NA	False	NA	NA	NA	45596609	45603613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45597671_45597763
ES.407.2	chr1	+	6463	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGGTTTCCATACAAGA	NA	False	NA	NA	False	NA	NA	NA	45597149	45603612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45597100_45603600
ES.4070.1	chr10	+	3099	7	ISM	ENSMUSG00000025355.8	ENSMUST00000026411.8	3402	9	3602	-4	3601	4	3prime_fragment	FALSE	canonical	1	1	junction_5	1.89296944860009	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGTTTCAGAGTCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	128630431	128636697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ES.4070.2	chr10	+	2277	7	ISM	ENSMUSG00000025355.8	ENSMUST00000219404.2	2236	9	3663	-231	3611	231	3prime_fragment	FALSE	canonical	1	1	junction_5	1.89296944860009	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCGCATCTCCCCAGGT	NA	False	NA	NA	False	AGTAAA	-14	NA	128630441	128635885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ES.4071.1	chr10	+	2886	7	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	427	7	NA	NA	165	485	multi-exon	FALSE	canonical	0	0	junction_1	137.329287966309	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTATGCCCTGTGCCCTT	2689	False	NA	NA	False	AAAAAG	-3	NA	128640095	128653857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128640250_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.10	chr10	+	6689	7	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	-10	11	intron_retention	FALSE	canonical	3	9	junction_2	131.107356349249	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAAATTGTTCACTCA	4006	False	NA	18	True	AAAAAG	-6	NA	128641412	128653383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.11	chr10	+	4307	2	ISM	ENSMUSG00000025354.6	ENSMUST00000219473.2	3203	4	-27	5761	2	2	5prime_fragment	FALSE	canonical	3	336	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGCTGTATTATATA	4018	False	NA	NA	False	ATTAAA	-22	NA	128641424	128646215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128641553_128642036
ES.4071.12	chr10	+	3686	8	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	2	647	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	158.400680270648	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATCTTCCTTCTCTTCT	4018	False	NA	NA	False	TATAAA	-16	NA	128641424	128654019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128643490_128647116_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.13	chr10	+	4208	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	4	-79	4	79	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCTTCTTGCTTTCTTTT	4020	False	NA	NA	False	AATATA	-11	NA	128641426	128655207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.14	chr10	+	3535	20	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	1084	12	NA	NA	6	-11	multi-exon	FALSE	canonical	0	0	junction_7	1771.68682162108	968	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	4022	False	NA	NA	False	NA	NA	NA	128641428	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069_128653257_128657637_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687606_128687802_128689051_128689121_128708289_128708380_128713201
ES.4071.15	chr10	+	2968	8	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	11	644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	127.799747692255	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACATCTTCCTTCTCT	4027	False	NA	NA	False	TATAAA	-13	NA	128641433	128654016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650469_128650510_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.16	chr10	+	3183	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	12	938	12	818	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTTGTGAGCTCTTTT	4028	False	NA	NA	False	NA	NA	NA	128641434	128654190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.17	chr10	+	4159	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-110	180	12	7	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGAGCCCTTTTTGC	4028	False	NA	NA	False	GATAAA	-37	NA	128641434	128655135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.18	chr10	+	4310	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	12	-189	12	2	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTATGTCTTGTAC	4028	False	NA	NA	False	NA	NA	NA	128641434	128655317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.19	chr10	+	7019	7	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	-11	369	intron_retention	FALSE	canonical	3	9	junction_2	131.107356349249	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTCAAGAGTGGAAACT	4034	False	NA	NA	False	AAAAAG	-26	NA	128641440	128653741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.2	chr10	+	3586	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	-819	1366	673	390	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCCTCTGACTTTC	3197	False	NA	NA	False	NA	NA	NA	128640603	128653762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.20	chr10	+	4455	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	21	-343	-8	156	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTTTTCTTTTCTTTT	4037	False	NA	NA	False	NA	NA	NA	128641443	128655471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.22	chr10	+	3081	17	NIC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	0	58183	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1683.27298249385	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	4045	False	NA	NA	False	AATAAA	-18	NA	128641451	128713498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069_128653257_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.23	chr10	+	7289	7	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	0	650	intron_retention	FALSE	canonical	3	9	junction_2	131.107356349249	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCTTCTCTTCTTTA	4045	False	NA	NA	False	TATAAA	-19	NA	128641451	128654022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.24	chr10	+	3018	8	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	5	11	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	158.400680270648	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAAATTGTTCACTCA	4050	False	NA	18	True	AAAAAG	-6	NA	128641456	128653383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128643490_128647116_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.25	chr10	+	3805	8	NNC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	6	646	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	159.077185731984	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATCTTCCTTCTCTTC	4051	False	NA	NA	False	TATAAA	-15	NA	128641457	128654018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128641553_128642036_128643490_128646963_128647781_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.26	chr10	+	3068	6	NIC	ENSMUSG00000025354.6	novel	4133	7	NA	NA	11	646	intron_retention	FALSE	canonical	3	291	junction_3	34.9433827784317	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATCTTCCTTCTCTTC	4056	False	NA	NA	False	TATAAA	-15	NA	128641462	128654018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652930_128653069
ES.4071.27	chr10	+	2255	6	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	491	-7	287	7	3prime_fragment	FALSE	canonical	3	291	junction_2	34.2776895370735	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATTTTAAATTGTTCA	4629	False	NA	14	True	AAAAAG	-2	NA	128642035	128653379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.28	chr10	+	1655	8	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	4133	7	NA	NA	-263	3904	multi-exon	FALSE	canonical	2	2	junction_6	163.10357295352	937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATTT	5577	False	NA	NA	False	NA	NA	NA	128642983	128659219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069_128653257_128657597_128657841_128658991
ES.4071.29	chr10	+	2119	1	Intergenic	novelGene_3133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	8898	False	NA	NA	False	NA	NA	NA	128646304	128648423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128646300_128648400
ES.4071.3	chr10	+	3210	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	-816	1739	676	17	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTCACTCAGTACTT	3200	False	NA	24	True	AAAAAG	-12	NA	128640606	128653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.30	chr10	+	1028	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	-103	-7	-103	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGTTTTATTAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	128657659	128713493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.31	chr10	+	1581	5	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	-101	4163	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	2126.3056430109	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	128657661	128680045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128678855
ES.4071.33	chr10	+	968	12	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	1655.68306545158	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657765	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687959_128688024_128689051_128689121_128708289_128708380_128713201
ES.4071.35	chr10	+	1510	3	ISM	ENSMUSG00000078427.4	ENSMUST00000219512.2	953	12	6	42906	-5	-5295	5prime_fragment	FALSE	canonical	1	1	junction_1	16.5	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTCATTAAATATGTTAG	NA	False	NA	NA	False	AAAAAG	-9	NA	128657771	128670587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128657841_128666819_128666854_128669180
ES.4071.37	chr10	+	949	12	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	128657776	128713478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.38	chr10	+	940	12	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1678.56975718975	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657776	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674318_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.39	chr10	+	1087	12	NIC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	1	-11	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	1661.30863483138	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657777	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687606_128687802_128689051_128689121_128708289_128708380_128713201
ES.4071.4	chr10	+	3840	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	-811	1104	681	652	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTCTCTTCTTTACC	3205	False	NA	NA	False	TATAAA	-21	NA	128640611	128654024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.41	chr10	+	2334	11	NIC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	1	-11	intron_retention	FALSE	canonical	3	14	junction_8	1529.00783516632	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657777	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687606_128689121_128708289_128708380_128713201
ES.4071.42	chr10	+	885	11	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1504.94254043136	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657778	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674318_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.43	chr10	+	822	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	2	-11	combination_of_known_splicesites	FALSE	canonical	3	355	junction_8	1412.89957529774	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657778	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
ES.4071.44	chr10	+	1470	2	ISM	ENSMUSG00000078427.4	ENSMUST00000220150.2	423	4	2	5294	2	-5294	5prime_fragment	FALSE	canonical	3	4500	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAAATATGTTAGG	NA	False	NA	NA	False	AAAAAG	-10	NA	128657778	128670588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128657841_128669180
ES.4071.45	chr10	+	867	11	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	3	-15	at_least_one_novel_splicesite	FALSE	canonical	3	355	junction_9	1697.93775209812	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAATAAAAAAGGAAGAA	NA	False	NA	NA	False	NA	NA	NA	128657779	128713471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
ES.4071.46	chr10	+	2418	10	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	4	-4276	intron_retention	FALSE	canonical	3	52	junction_8	1451.27200911629	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTTCCCCCGGAAGC	NA	False	NA	NA	False	AAGAAA	-30	NA	128657780	128709210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128688024_128689051_128689121_128708289
ES.4071.47	chr10	+	839	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	7	-11	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	1426.27695438764	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657783	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128657841_128669180_128669281_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.49	chr10	+	1891	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	25	-998	11	986	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCCTTTTATTTTTC	NA	False	NA	NA	False	AATATA	-14	NA	128657787	128714484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.5	chr10	+	2946	7	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	427	7	NA	NA	-558	649	multi-exon	FALSE	canonical	3	6	junction_1	135.15299972007	374	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	3458	False	NA	NA	False	TATAAA	-18	NA	128640864	128654021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr10_+_128640915_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.50	chr10	+	662	10	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	11	-10490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1555.95244936706	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGTGCTTGTATGT	NA	False	NA	NA	False	ATTAAA	-16	NA	128657787	128702996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128702852
ES.4071.51	chr10	+	698	10	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	11	8667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1555.95244936706	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCTTCATACGTTTTG	NA	False	NA	NA	False	NA	NA	NA	128657787	128693327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128693147
ES.4071.52	chr10	+	3285	10	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_6	1646.63021402147	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657791	128713498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684609_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.54	chr10	+	913	11	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1764.47935947123	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657792	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128689042_128689121_128708289_128708380_128713201
ES.4071.55	chr10	+	1509	3	NNC	ENSMUSG00000078427.4	novel	423	4	NA	NA	-8	-5294	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	40.5	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAAATATGTTAGG	NA	False	NA	NA	False	AAAAAG	-10	NA	128657792	128670588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180
ES.4071.59	chr10	+	1149	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	33	-264	-5	252	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128657795	128713750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.6	chr10	+	2521	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-227	1935	-105	8	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTAAATTGTTCAC	3911	False	NA	15	True	AAAAAG	-3	NA	128641317	128653380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.60	chr10	+	2924	11	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-5	-11	intron_retention	FALSE	canonical	3	390	junction_1	1573.42443415628	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657795	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128689121_128708289_128708380_128713201
ES.4071.61	chr10	+	1184	14	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	1836.17806048936	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657797	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687606_128687802_128687959_128688024_128689051_128689121_128708289_128708380_128713201
ES.4071.62	chr10	+	1040	11	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1479.11853480375	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657797	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682232_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.63	chr10	+	989	13	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	-3	-11	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	1782.50775867097	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128657797	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128687959_128688024_128689051_128689121_128708289_128708380_128713201
ES.4071.64	chr10	+	3117	1	Intergenic	novelGene_3134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAGAGGAGAGACTTT	NA	False	NA	NA	False	NA	NA	NA	128658851	128661968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128658900_128662000
ES.4071.65	chr10	+	881	11	NNC	ENSMUSG00000078427.4	novel	427	7	NA	NA	2845	-11	at_least_one_novel_splicesite	FALSE	canonical	3	471	junction_1	1435.3287567662	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128660645	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.66	chr10	+	4392	2	NNC	ENSMUSG00000078427.4	novel	953	12	NA	NA	8125	-5342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	128665925	128670540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128666945_128667167
ES.4071.67	chr10	+	637	1	Intergenic	novelGene_3136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTAGTAACTCCAATTG	NA	False	NA	NA	False	NA	NA	NA	128677116	128677753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128677100_128677800
ES.4071.68	chr10	+	1883	8	NNC	ENSMUSG00000078427.4	novel	427	7	NA	NA	21683	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1333.46159927262	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128679483	128713498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128680730_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.69	chr10	+	3342	7	ISM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	21910	11	21872	-11	3prime_fragment	FALSE	canonical	3	1529	junction_4	946.064597277703	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	128679672	128713475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ES.4071.7	chr10	+	4379	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-148	-2	-26	2	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTATGTCTTGTAC	3990	False	NA	NA	False	NA	NA	NA	128641396	128655317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.70	chr10	+	138	1	Intergenic	novelGene_3139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128700855	128700993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_128700900_128701000
ES.4071.8	chr10	+	3070	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-135	1294	-13	649	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4003	False	NA	NA	False	TATAAA	-18	NA	128641409	128654021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4071.9	chr10	+	3079	7	FSM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	-132	-649	-10	649	multi-exon	FALSE	canonical	3	10	junction_1	133.703236892588	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4006	False	NA	NA	False	TATAAA	-18	NA	128641412	128654021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128641596_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ES.4072.1	chr10	-	3136	6	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1012	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.0751673029449	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCCTCTACTGTTGCT	4725	False	NA	1	True	AATAAA	-26	NA	128641251	128635896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128639870_128640079_128640528
ES.4072.10	chr10	-	2890	6	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1094	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.0751673029449	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	4643	False	NA	-8	True	AATAAA	-17	NA	128641333	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128639870_128640063_128640831
ES.4072.11	chr10	-	3044	6	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-853	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.8156154748806	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	4884	False	NA	-8	True	AATAAA	-17	NA	128641092	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128637900_128638273_128638387_128638966_128639227_128639870
ES.4072.12	chr10	-	4209	4	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-1000	1	-1000	-1	intron_retention	FALSE	canonical	3	22	junction_1	6.37704215656966	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	4737	False	NA	-8	True	AATAAA	-17	NA	128641239	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966
ES.4072.13	chr10	-	2340	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-957	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.9301005409857	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGGGAGATGCGCCTC	4780	False	NA	-9	True	AATAAA	-16	NA	128641196	128635906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128641051
ES.4072.14	chr10	-	2603	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1001	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9.90896059130321	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGGGAGATGCGCCT	4736	False	NA	-10	True	AATAAA	-15	NA	128641240	128635907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640831
ES.4072.15	chr10	-	5353	2	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-1142	3	-1142	-3	intron_retention	FALSE	canonical	3	22	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGGGAGATGCGCCT	4595	False	NA	-10	True	AATAAA	-15	NA	128641381	128635907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128637099_128637219
ES.4072.16	chr10	-	3183	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-851	3	-851	-3	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGGGGAGATGCGCCT	4886	False	NA	-10	True	AATAAA	-15	NA	128641090	128635907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ES.4072.17	chr10	-	2802	6	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-997	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.0751673029449	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACCTGGGGAGATG	4740	False	NA	-15	True	AATAAA	-10	NA	128641236	128635912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128639870_128640079_128640831
ES.4072.2	chr10	-	4855	3	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	-1065	0	-1065	0	intron_retention	FALSE	canonical	3	22	junction_1	0.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4672	False	NA	-7	True	AATAAA	-18	NA	128641304	128635904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128637099_128637219_128637381_128637804
ES.4072.3	chr10	-	3881	4	ISM	ENSMUSG00000047090.14	ENSMUST00000139227.2	1064	5	-1793	-805	-1140	0	intron_retention	FALSE	canonical	2	4	junction_2	13.0979218029257	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4597	False	NA	-7	True	AATAAA	-18	NA	128641379	128635904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128637099_128637219_128637381_128638273_128638387_128638966
ES.4072.4	chr10	-	2996	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1088	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	11.3880419739304	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4649	False	NA	-7	True	AATAAA	-18	NA	128641327	128635904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640528
ES.4072.5	chr10	-	4638	3	FSM	ENSMUSG00000047090.14	ENSMUST00000152966.2	3156	3	-1413	-69	-1004	0	multi-exon	FALSE	canonical	3	22	junction_1	7	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	4733	False	NA	-7	True	AATAAA	-18	NA	128641243	128635904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128637099_128637219_128638387_128638966
ES.4072.6	chr10	-	3620	3	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-1012	-1	intron_retention	FALSE	canonical	2	8	junction_2	7	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	4725	False	NA	-8	True	AATAAA	-17	NA	128641251	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128639227_128640831
ES.4072.7	chr10	-	2827	4	NIC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-69	-1	intron_retention	FALSE	canonical	3	13	junction_3	9.46337971105226	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	5668	False	NA	-8	True	AATAAA	-17	NA	128640308	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128637099_128637219_128638387_128638966_128639227_128640101
ES.4072.8	chr10	-	3564	5	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-999	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	11.0113577727726	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	4738	False	NA	-8	True	AATAAA	-17	NA	128641238	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128639870
ES.4072.9	chr10	-	2492	6	NNC	ENSMUSG00000047090.14	novel	2335	5	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	13.6616250863505	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGGAGATGCGCCTCT	6137	False	NA	-8	True	AATAAA	-17	NA	128639839	128635905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128639445_128639577_128639674
ES.4073.1	chr10	-	4562	1	Genic_Genomic	ENSMUSG00000025353.6	novel	NA	NA	NA	NA	3428	4300	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTAAGTGGTAACAGA	NA	False	NA	NA	False	NA	NA	NA	128654032	128649470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128649500_128654000
ES.4073.10	chr10	-	1104	4	NNC	ENSMUSG00000025353.6	novel	1573	4	NA	NA	-18	63	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	388.76985479844	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	-2	True	TATAAA	-15	NA	128657493	128654287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128654885_128655822_128655975_128656129_128656402_128657410
ES.4073.11	chr10	-	804	4	NNC	ENSMUSG00000025353.6	novel	1051	4	NA	NA	-8	-13	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	383.639877431369	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGAGAGATTTTCTC	NA	False	NA	-6	True	AATAAA	-32	NA	128657483	128654363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128654885_128655822_128655975_128656129_128656188_128657410
ES.4073.12	chr10	-	1044	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	-7	14	-7	-14	multi-exon	FALSE	canonical	3	10	junction_3	384.57248991575	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACAGAGAGATTTTCT	NA	False	NA	-7	True	AATAAA	-31	NA	128657482	128654364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128656129_128656430_128657410
ES.4073.14	chr10	-	2557	1	Genic_Genomic	ENSMUSG00000025353.6	novel	NA	NA	NA	NA	-583	-949	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128658097	128655540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128655500_128658100
ES.4073.15	chr10	-	1789	2	ISM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	30	949	-9	-949	intron_retention	FALSE	canonical	3	748	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128657484	128655540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128655975_128656129
ES.4073.2	chr10	-	1828	4	NNC	ENSMUSG00000025353.6	novel	1573	4	NA	NA	6	445	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	383.639877431369	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCCCTGACATTG	NA	False	NA	NA	False	AATAAA	-30	NA	128657469	128653325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_-_128654885_128655822_128655975_128656129_128656188_128657410
ES.4073.3	chr10	-	2030	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-20	-437	-8	437	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCCTTTTGACTCCC	NA	False	NA	NA	False	AATAAA	-22	NA	128657483	128653333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ES.4073.4	chr10	-	1950	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	31	-1257	-8	436	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGCCCTTTTGACTCC	NA	False	NA	NA	False	AATAAA	-21	NA	128657483	128653334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
ES.4073.5	chr10	-	2764	2	ISM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-9	0	3	0	intron_retention	FALSE	canonical	3	886	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCAGTTTCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	128657472	128653770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128654885_128655822
ES.4073.6	chr10	-	1087	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-31	517	-19	63	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	-2	True	TATAAA	-15	NA	128657494	128654287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ES.4073.7	chr10	-	1015	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	13	-304	13	63	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	-2	True	TATAAA	-15	NA	128657501	128654287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
ES.4073.8	chr10	-	823	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	-24	-133	-9	63	multi-exon	FALSE	canonical	3	26	junction_2	430	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTCTCTACTCCT	NA	False	NA	-2	True	TATAAA	-15	NA	128657484	128654287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128654885_128655822_128655975_128657410
ES.4074.1	chr10	-	3855	1	Intergenic	novelGene_3135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAACAACAACAAAAAA	8958	False	NA	NA	False	NA	NA	NA	128663346	128659491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128659500_128663300
ES.4074.2	chr10	-	2320	2	Antisense	novelGene_ENSMUSG00000078427.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCCAAAACAACAACAAAA	8958	False	NA	NA	False	NA	NA	NA	128663346	128659493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_-_128660971_128662503
ES.4075.1	chr10	-	179	1	Intergenic	novelGene_3137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTAAATTTTTTTTTT	8975	False	NA	NA	False	NA	NA	NA	128687290	128687111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128687100_128687300
ES.4076.1	chr10	-	3683	1	Intergenic	novelGene_3138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGAGGTAGCTGGTGCT	3213	False	NA	NA	False	AATAAA	-24	NA	128701854	128698171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128698200_128701900
ES.4077.1	chr10	-	2113	1	Genic_Genomic	ENSMUSG00000025352.7	novel	NA	NA	NA	NA	7710	399	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCCATATGCCTACAGC	1344	False	NA	NA	False	NA	NA	NA	128719877	128717764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr10_-_128717800_128719900
ES.4078.1	chr10	-	250	1	Intergenic	novelGene_3140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCTTTTTAAAAAAGTAAA	9855	False	NA	NA	False	NA	NA	NA	128734418	128734168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128734200_128734400
ES.4079.1	chr10	-	150	1	Intergenic	novelGene_3141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAGGAAAAAAA	9696	False	NA	NA	False	NA	NA	NA	128736610	128736460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128736500_128736600
ES.408.1	chr1	+	125	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	45641473	45641598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45641500_45641600
ES.4080.10	chr10	+	924	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	-39	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	1408.77615145131	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAGATGGTCTCA	538	False	NA	28	True	ATTAAA	-20	NA	128745751	128748684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748498
ES.4080.12	chr10	+	2271	6	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	-14	1	intron_retention	FALSE	canonical	3	3705	junction_3	237.142488812106	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	563	False	NA	29	True	ATTAAA	-21	NA	128745776	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.15	chr10	+	969	7	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	3700	junction_1	159.05519656885	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAGATGGTCTCA	584	False	NA	28	True	ATTAAA	-20	NA	128745797	128748684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748391_128748543
ES.4080.16	chr10	+	873	8	NNC	ENSMUSG00000025351.15	novel	1109	9	NA	NA	262	1	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_1	1391.05600761671	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	839	False	NA	29	True	ATTAAA	-21	NA	128746052	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128746122_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.17	chr10	+	2159	3	NIC	ENSMUSG00000025351.15	novel	1043	8	NA	NA	-199	-1	intron_retention	FALSE	canonical	3	3705	junction_1	335.5	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAAAGGAGATGGTCTC	1078	False	NA	27	True	ATTAAA	-19	NA	128746291	128748683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128747933_128748029_128748171_128748306
ES.4080.18	chr10	+	747	7	NNC	ENSMUSG00000025351.15	novel	1109	9	NA	NA	171	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1496.46516832167	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	196	False	NA	29	True	ATTAAA	-21	NA	128746661	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128746682_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.19	chr10	+	1434	5	NIC	ENSMUSG00000025351.15	novel	1043	8	NA	NA	277	1	intron_retention	FALSE	canonical	3	3705	junction_2	259.783082590072	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	302	False	NA	29	True	ATTAAA	-21	NA	128746767	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.2	chr10	+	1109	9	FSM	ENSMUSG00000025351.15	ENSMUST00000219317.2	1109	9	-6	6	-6	1	multi-exon	FALSE	canonical	3	15	junction_1	1695.03832921265	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	NA	False	NA	29	True	ATTAAA	-21	NA	128736851	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128737005_128744769_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.3	chr10	+	1756	8	FSM	ENSMUSG00000025351.15	ENSMUST00000105229.9	1043	8	-719	6	-719	1	multi-exon	FALSE	canonical	3	191	junction_1	1345.38160886396	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	NA	False	NA	29	True	ATTAAA	-21	NA	128743969	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.4	chr10	+	855	8	NIC	ENSMUSG00000025351.15	novel	682	6	NA	NA	127	1	combination_of_known_junctions	FALSE	canonical	3	161	junction_1	1355.75908401071	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	127	False	NA	29	True	ATTAAA	-21	NA	128745340	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128745392_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.5	chr10	+	1035	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	30	-2	30	2	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGATGGTCTCAGT	384	False	NA	30	True	ATTAAA	-22	NA	128745597	128748686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.6	chr10	+	1073	9	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	102	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1704.70560141627	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	456	False	NA	29	True	ATTAAA	-21	NA	128745669	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_128745828_128746263_128746341_128746533_128746645_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.7	chr10	+	1359	7	ISM	ENSMUSG00000025351.15	ENSMUST00000105229.9	1043	8	1020	6	-82	1	3prime_fragment	FALSE	canonical	3	3705	junction_4	220.245065526765	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	495	False	NA	29	True	ATTAAA	-21	NA	128745708	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_+_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ES.4080.9	chr10	+	988	7	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	-49	1	intron_retention	FALSE	canonical	3	3700	junction_1	246.151996854699	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGATGGTCTCAG	528	False	NA	29	True	ATTAAA	-21	NA	128745741	128748685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747933_128748029_128748171_128748306_128748391_128748543
ES.4081.1	chr10	-	279	1	Intergenic	novelGene_3142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATAAGTCTTTC	9701	False	NA	NA	False	NA	NA	NA	128738031	128737752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128737800_128738000
ES.4082.1	chr10	-	181	1	Intergenic	novelGene_3143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAAAGAA	8442	False	NA	NA	False	NA	NA	NA	128739290	128739109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128739100_128739300
ES.4083.1	chr10	+	2501	1	Antisense	novelGene_ENSMUSG00000090247.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTCTTCTTGAAGTTT	NA	False	NA	NA	False	AAAACA	-10	NA	128759036	128761537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_128759000_128761500
ES.4084.1	chr10	-	3173	6	NIC	ENSMUSG00000025350.16	novel	1258	5	NA	NA	-178	5	intron_retention	FALSE	canonical	0	0	junction_2	296.178729823733	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGTGTACAGAAATGAAG	NA	False	NA	NA	False	AATAAA	-24	NA	128758935	128749456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128749806_128750003_128750168_128753748_128754008_128754121_128755977_128756427_128756561_128758522
ES.4084.2	chr10	-	3974	2	FSM	ENSMUSG00000025350.16	ENSMUST00000139217.2	580	2	-3141	-253	288	0	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGGTGTACAGAAA	NA	False	NA	NA	False	AATAAA	-19	NA	128753633	128749461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128749806_128750003
ES.4084.3	chr10	-	1081	1	Intergenic	novelGene_3144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGCTGGGGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	128752947	128751866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128751900_128752900
ES.4084.4	chr10	-	2956	5	NIC	ENSMUSG00000025350.16	novel	701	4	NA	NA	-152	1098	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	302.889728284074	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTGTAGTACCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	128758909	128752071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr10_-_128754008_128754121_128754462_128755816_128755977_128756427_128756561_128758522
ES.4084.5	chr10	-	555	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128759398	128755782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
ES.4084.6	chr10	-	974	3	ISM	ENSMUSG00000090247.8	ENSMUST00000153731.8	613	4	27	2032	27	0	5prime_fragment	FALSE	canonical	3	623	junction_2	12.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128759366	128755782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr10_-_128756561_128758522_128758596_128759243
ES.4085.1	chr10	-	171	1	Intergenic	novelGene_3145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	128761901	128761730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128761700_128761900
ES.4086.1	chr10	-	166	1	Intergenic	novelGene_3146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGACTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	128766868	128766702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_128766700_128766900
ES.4087.1	chr10	+	4036	25	FSM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	-26	3	-26	0	multi-exon	TRUE	canonical	0	0	junction_11	1.99956592511697	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATCTCTGGCTGCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	128769660	128794148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550_128776807_128777690_128777811_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ES.4088.1	chr10	+	176	1	Antisense	novelGene_ENSMUSG00000052012.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAGAGAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	129441645	129441821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr10_+_129441600_129441800
ES.4089.1	chr10	-	245	1	Intergenic	novelGene_3147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAATCGCTT	9785	False	NA	NA	False	NA	NA	NA	129713816	129713571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_-_129713600_129713800
ES.409.1	chr1	-	4183	37	ISM	ENSMUSG00000026042.17	ENSMUST00000086430.5	6625	54	91796	975	10925	-975	3prime_fragment	FALSE	canonical	0	0	junction_2	1.04822012578407	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTCTAACACACGTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	45450646	45414455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593
ES.409.2	chr1	-	4888	55	NNC	ENSMUSG00000026042.17	novel	6625	54	NA	NA	-134217	-1469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.997252742061945	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTCACTGTAATGAATA	NA	False	NA	NA	False	AATAAA	-16	NA	45676659	45414949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45478029_45478044_45481806_45482029_45676343_45676378_45676499
ES.409.3	chr1	-	160	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATTATTCTT	NA	False	NA	NA	False	NA	NA	NA	45564833	45564673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_45564700_45564800
ES.4090.1	chr10	+	177	1	Intergenic	novelGene_3148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	130283389	130283566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_130283400_130283600
ES.4091.1	chr10	+	174	1	Intergenic	novelGene_3149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2140	False	NA	NA	False	NA	NA	NA	130365822	130365996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_130365800_130366000
ES.4092.1	chr10	-	5727	1	FSM	ENSMUSG00000112195.2	ENSMUST00000218754.2	400	1	-5020	-307	-5020	307	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTTTTTTCATGGT	NA	False	NA	NA	False	AATAAA	-14	NA	130376850	130371123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr10_-_130371100_130376800
ES.4093.1	chr10	+	4967	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-29	6110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.4693443182191	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCTCAGCAATTAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	130378186	130413772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409350_130409848
ES.4093.2	chr10	+	3687	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-21	4673	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	25.4693443182191	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGCCTTGGTCATGGT	NA	False	NA	2	True	NA	NA	NA	130378194	130412335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409932_130410265
ES.4093.3	chr10	+	3684	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-17	4676	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	25.4693443182191	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATC	NA	False	NA	5	True	NA	NA	NA	130378198	130412338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409923_130410258
ES.4093.4	chr10	+	5108	5	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-10	6105	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	25.4693443182191	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTGTGCTCAGCAATT	NA	False	NA	NA	False	ATTAAA	-19	NA	130378205	130413767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627_130409906_130410239
ES.4093.5	chr10	+	412	4	NNC	ENSMUSG00000112742.2	novel	415	3	NA	NA	-4	1081	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_3	7.25718035235908	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTAATCAATGTAGT	NA	False	NA	NA	False	NA	NA	NA	130378211	130408743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr10_+_130378320_130407161_130407289_130407478_130407540_130408627
ES.4093.6	chr10	+	4536	1	Intergenic	novelGene_3150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	130412665	130417201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr10_+_130412700_130417200
ES.4094.1	chr11	+	3733	8	NNC	ENSMUSG00000082286.12	novel	1235	7	NA	NA	-2482	480	intron_retention	TRUE	non_canonical	0	0	junction_1	60.4672284323146	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTCCTGGGCTCTGT	NA	False	NA	NA	False	AGTAAA	-21	NA	3073421	3081484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3073641_3073800_3074125_3075787_3077220_3077478_3077645_3078928_3079521_3079764_3079912_3080152_3080314_3080792
ES.4094.2	chr11	+	3057	5	NNC	ENSMUSG00000082286.12	novel	715	3	NA	NA	-2158	921	intron_retention	FALSE	canonical	2	2	junction_1	71.7125337719983	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3073745	3081925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3077478_3077645_3078928_3079521_3079764_3079912_3080152
ES.4094.3	chr11	+	3609	8	NNC	ENSMUSG00000082286.12	novel	1235	7	NA	NA	-2155	1422	intron_retention	FALSE	canonical	0	0	junction_2	61.4136194427688	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	11	True	AATAAA	-19	NA	3073748	3082426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3075787_3076059_3077171_3077220_3077478_3077645_3078928_3079521_3079764_3079912_3080152_3081082_3081346
ES.4094.4	chr11	+	2586	6	NNC	ENSMUSG00000082286.12	novel	715	3	NA	NA	-1881	943	intron_retention	FALSE	canonical	0	0	junction_3	70.5169483174081	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	3074022	3081947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3077478_3077645_3078928_3079166_3079381_3079521_3079764_3079912_3080152
ES.4094.5	chr11	+	2489	6	NNC	ENSMUSG00000082286.12	novel	715	3	NA	NA	-1853	921	intron_retention	FALSE	canonical	1	1	junction_3	70.3516879683778	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3074050	3081925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3077478_3077645_3078928_3079119_3079381_3079521_3079764_3079912_3080152
ES.4094.6	chr11	+	3016	6	NNC	ENSMUSG00000082286.12	novel	1235	7	NA	NA	-1846	921	intron_retention	FALSE	canonical	3	10	junction_2	66.7640621891748	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3074057	3081925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3075787_3076059_3077478_3077645_3078928_3079521_3079764_3079912_3080152
ES.4094.7	chr11	+	2117	8	NNC	ENSMUSG00000082286.12	novel	1235	7	NA	NA	-1835	1416	intron_retention	FALSE	canonical	0	0	junction_4	61.8751211089312	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	5	True	AATAAA	-13	NA	3074068	3082420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3074125_3075787_3076059_3077478_3077645_3078928_3079166_3079381_3079521_3079764_3079912_3080152_3081082_3082248
ES.4094.8	chr11	+	2067	6	NNC	ENSMUSG00000082286.12	novel	1235	7	NA	NA	933	1416	intron_retention	FALSE	canonical	2	11	junction_4	66.6051049094587	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCCAACAATCTTCTGT	NA	False	NA	5	True	AATAAA	-13	NA	3076938	3082420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3077645_3078928_3079521_3079764_3079912_3080152_3080314_3080792_3081082_3082248
ES.4095.1	chr11	+	177	1	Intergenic	novelGene_3151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTGTAAAAGAACTG	NA	False	NA	NA	False	NA	NA	NA	3122087	3122264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3122100_3122300
ES.4096.1	chr11	+	144	1	Intergenic	novelGene_3152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	3123797	3123941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3123800_3123900
ES.4097.1	chr11	+	137	1	Antisense	novelGene_ENSMUSG00000023764.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATAAAAAAAATTT	4576	False	NA	-14	True	NA	NA	NA	3135680	3135817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3135700_3135800
ES.4098.1	chr11	+	184	1	Intergenic	novelGene_3153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	3147308	3147492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3147300_3147500
ES.4099.1	chr11	+	3630	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	-59	-6	-59	0	multi-exon	FALSE	canonical	3	10	junction_1	69.1571601699214	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3514	False	NA	13	True	ATTAAA	-29	NA	3152332	3194587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.10	chr11	+	4133	18	NNC	ENSMUSG00000020454.18	novel	3712	18	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.0393428692448	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3790	False	NA	12	True	ATTAAA	-28	NA	3152608	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3153337_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.12	chr11	+	4498	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-52	0	intron_retention	FALSE	canonical	3	81	junction_9	58.994750807486	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3792	False	NA	14	True	ATTAAA	-30	NA	3152610	3194588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.13	chr11	+	2013	9	ISM	ENSMUSG00000020454.18	ENSMUST00000110048.8	3712	18	-409	16708	-51	-2270	5prime_fragment	FALSE	canonical	3	6	junction_1	78.2715625243294	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTAAGTATTGTTGA	3793	False	NA	NA	False	AATAAA	-14	NA	3152611	3177879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705
ES.4099.14	chr11	+	3735	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	79.2443478531224	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3793	False	NA	12	True	ATTAAA	-28	NA	3152611	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184584_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.15	chr11	+	3663	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	-49	0	-49	0	multi-exon	FALSE	canonical	3	81	junction_10	64.4808326386825	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3795	False	NA	14	True	ATTAAA	-30	NA	3152613	3194588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.16	chr11	+	1806	10	ISM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	-45	14398	-45	4	5prime_fragment	FALSE	canonical	3	104	junction_1	44.0756924695082	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAATTTGGAAATTTCT	3799	False	NA	NA	False	AATAAA	-21	NA	3152617	3180190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868
ES.4099.17	chr11	+	3642	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-33	2	combination_of_known_splicesites	TRUE	canonical	3	6	junction_10	72.7915923507311	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATATGGCTGGTACTGTGT	3811	False	NA	9	True	ATTAAA	-25	NA	3152629	3194583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184584_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.18	chr11	+	3606	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	76.1841701259374	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3815	False	NA	13	True	ATTAAA	-29	NA	3152633	3194587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180066_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.19	chr11	+	3454	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	-23	183	-23	-176	multi-exon	FALSE	canonical	3	81	junction_10	64.4808326386825	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTGTATAAACTTTTG	3821	False	NA	NA	False	AATAAA	-22	NA	3152639	3194405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.2	chr11	+	3678	19	NIC	ENSMUSG00000020454.18	novel	3565	18	NA	NA	-36	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	76.7602488431945	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3537	False	NA	12	True	ATTAAA	-28	NA	3152355	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.20	chr11	+	3753	9	ISM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	-14	14403	-14	-1	intron_retention	FALSE	canonical	3	104	junction_1	46.4811789867684	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGCAATTTGGAAA	3830	False	NA	NA	False	AATAAA	-16	NA	3152648	3180185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705
ES.4099.21	chr11	+	3430	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	70.2183445899646	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3830	False	NA	11	True	ATTAAA	-27	NA	3152648	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184584_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.22	chr11	+	3558	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	79.9722173980161	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3851	False	NA	11	True	ATTAAA	-27	NA	3152669	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170289_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.23	chr11	+	3338	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-12	-183	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACAGACCTGTGTATAA	3858	False	NA	NA	False	AATAAA	-15	NA	3152676	3194398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.24	chr11	+	3662	20	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	89.0927183633655	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3865	False	NA	12	True	ATTAAA	-28	NA	3152683	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3181787_3181859_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.25	chr11	+	3230	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-5	-284	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGGAAGTCTTTCTTT	3865	False	NA	NA	False	AATACA	-18	NA	3152683	3194297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.26	chr11	+	3673	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	73.8727981832195	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	3865	False	NA	7	True	ATTAAA	-23	NA	3152683	3194581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180066_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.27	chr11	+	3569	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	99.3138963086234	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3866	False	NA	13	True	ATTAAA	-29	NA	3152684	3194587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184511_3184646_3185580_3185661_3186213_3186354_3189201_3189302_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.29	chr11	+	3046	2	ISM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	299	29336	2	1811	internal_fragment	FALSE	canonical	3	261	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3872	False	NA	NA	False	NA	NA	NA	3152690	3165245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3153751_3163259
ES.4099.3	chr11	+	3386	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	0	179	0	-179	multi-exon	FALSE	canonical	3	10	junction_1	69.1571601699214	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACCTGTGTATAAACTT	3573	False	NA	NA	False	AATAAA	-19	NA	3152391	3194402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.30	chr11	+	3594	18	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	78.105908047806	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3874	False	NA	11	True	ATTAAA	-27	NA	3152692	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192486_3192719_3193182_3193351_3193850
ES.4099.32	chr11	+	4109	19	NIC	ENSMUSG00000020454.18	novel	3676	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	77.3725156165903	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3875	False	NA	11	True	ATTAAA	-27	NA	3152693	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.33	chr11	+	3739	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	78.3020426077328	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	3876	False	NA	12	True	ATTAAA	-28	NA	3152694	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180066_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.34	chr11	+	3584	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	10	-182	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAGACCTGTGTATAAA	3880	False	NA	NA	False	AATAAA	-16	NA	3152698	3194399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.35	chr11	+	3561	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.6807037066818	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATATGGCTGGTACTGTG	3882	False	NA	8	True	ATTAAA	-24	NA	3152700	3194582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179877_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.36	chr11	+	3231	16	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	75.0192864091184	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	3884	False	NA	7	True	ATTAAA	-23	NA	3152702	3194581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.37	chr11	+	2614	15	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	18	221	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	54.9621391022391	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGATATAGCTCAATTC	3888	False	NA	NA	False	NA	NA	NA	3152706	3191196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894
ES.4099.38	chr11	+	3876	18	ISM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	52	186	-19	-179	intron_retention	FALSE	canonical	3	81	junction_10	62.1272274252059	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACCTGTGTATAAACTT	3896	False	NA	NA	False	AATAAA	-19	NA	3152714	3194402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182
ES.4099.4	chr11	+	2010	10	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	50.9373859159519	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGAGCAATTTGGAAAT	3786	False	NA	NA	False	AATAAA	-17	NA	3152604	3180186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868
ES.4099.40	chr11	+	4982	16	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-17	0	intron_retention	FALSE	canonical	3	104	junction_1	56.4702478203247	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3898	False	NA	11	True	ATTAAA	-27	NA	3152716	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.41	chr11	+	3704	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.1005607650012	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGGCTGGTACTGTGTT	3898	False	NA	10	True	ATTAAA	-26	NA	3152716	3194584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165638_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.42	chr11	+	3525	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-9	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	86.5666089076948	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTACATATGCCACGT	3906	False	NA	-18	True	NA	NA	NA	3152724	3194556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3153045_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850_3194149_3194318
ES.4099.44	chr11	+	3430	18	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.6336722543256	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3906	False	NA	11	True	ATTAAA	-27	NA	3152724	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165638_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.45	chr11	+	3369	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	84.7717064505185	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3906	False	NA	11	True	ATTAAA	-27	NA	3152724	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.47	chr11	+	4224	17	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-8	0	intron_retention	FALSE	canonical	3	81	junction_1	58.0397223890673	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3907	False	NA	11	True	ATTAAA	-27	NA	3152725	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.48	chr11	+	3657	18	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	93.0693085489069	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGGCTGGTACTGTGTT	3916	False	NA	10	True	ATTAAA	-26	NA	3152734	3194584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170241_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189480_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.49	chr11	+	3481	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	1	-177	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGTGTATAAACTTTT	3916	False	NA	NA	False	AATAAA	-21	NA	3152734	3194404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.5	chr11	+	3600	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3786	False	NA	14	True	ATTAAA	-30	NA	3152604	3194588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.50	chr11	+	4033	19	NNC	ENSMUSG00000020454.18	novel	3676	19	NA	NA	1	-92	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	78.1462107009264	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCTTGTGTCAACTGTT	3916	False	NA	-85	True	CATAAA	-12	NA	3152734	3194489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3153388_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.51	chr11	+	3623	19	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_16	83.4023417973617	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGGCTGGTACTGTGTT	3916	False	NA	10	True	ATTAAA	-26	NA	3152734	3194584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192486_3192719_3193182_3193351_3193850
ES.4099.52	chr11	+	3582	17	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	80.5589603566853	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	3922	False	NA	11	True	ATTAAA	-27	NA	3152740	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.54	chr11	+	3615	18	NNC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	79.0778601030498	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3956	False	NA	13	True	ATTAAA	-29	NA	3152774	3194587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179877_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.55	chr11	+	3939	18	NNC	ENSMUSG00000020454.18	novel	3712	18	NA	NA	120	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.8498583071648	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	4035	False	NA	12	True	ATTAAA	-28	NA	3152853	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3153388_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.56	chr11	+	3685	20	NNC	ENSMUSG00000020454.18	novel	2952	16	NA	NA	-126	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	94.2103204937475	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTGTGAACGATATG	4050	False	NA	-4	True	ATTAAA	-12	NA	3152868	3194570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189201_3189302_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.57	chr11	+	3825	19	NNC	ENSMUSG00000020454.18	novel	3712	18	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	106.030685053146	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	4051	False	NA	7	True	ATTAAA	-23	NA	3152869	3194581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184584_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3191272_3191364_3192376_3192719_3193182_3193351_3193850
ES.4099.59	chr11	+	4270	17	NIC	ENSMUSG00000020454.18	novel	3712	18	NA	NA	3	0	intron_retention	FALSE	canonical	3	6	junction_1	72.0394857005518	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTGGTACTGTGTTTA	4205	False	NA	12	True	ATTAAA	-28	NA	3153023	3194586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.6	chr11	+	3794	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3787	False	NA	14	True	ATTAAA	-30	NA	3152605	3194588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.60	chr11	+	3600	18	FSM	ENSMUSG00000020454.18	ENSMUST00000110048.8	3712	18	110	2	110	0	multi-exon	FALSE	canonical	3	6	junction_1	69.9066109610197	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTGGTACTGTGTTT	4312	False	NA	11	True	ATTAAA	-27	NA	3153130	3194585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.61	chr11	+	2864	14	ISM	ENSMUSG00000020454.18	ENSMUST00000179770.8	3676	19	18097	3	-6675	1	3prime_fragment	FALSE	canonical	3	81	junction_5	66.6430036900229	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATATGGCTGGTACTGTG	7114	False	NA	8	True	ATTAAA	-24	NA	3171091	3194582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.63	chr11	+	135	1	Intergenic	novelGene_3156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3192113	3192248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3192100_3192200
ES.4099.7	chr11	+	3864	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGTACTGTGTTTAT	3788	False	NA	13	True	ATTAAA	-29	NA	3152606	3194587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ES.4099.8	chr11	+	3251	17	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	-55	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	76.8126779900297	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGGCTGGTACTGTGTT	3789	False	NA	10	True	ATTAAA	-26	NA	3152607	3194584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3193182_3193351_3193850
ES.41.1	chr1	+	132	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	7031733	7031865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7031700_7031900
ES.410.1	chr1	-	178	1	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACAT	NA	False	NA	NA	False	NA	NA	NA	45708325	45708147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_45708100_45708300
ES.4100.1	chr11	-	3598	14	NNC	ENSMUSG00000023764.19	novel	3759	31	NA	NA	160	0	intron_retention	TRUE	canonical	1	1	junction_7	14.782446010697	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCCTACTTTTCATAC	8595	False	NA	0	True	AATGAA	-17	NA	3096196	3081885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087127_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161
ES.4100.10	chr11	-	6733	29	NNC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-2	-66	intron_retention	FALSE	canonical	0	0	junction_2	22.7114497331102	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTAGTTTTTGTTTTGT	8016	False	NA	-70	True	NA	NA	NA	3143426	3081955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3082132_3082215_3082328_3082872_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3143359
ES.4100.11	chr11	-	5242	29	NIC	ENSMUSG00000023764.19	novel	3969	33	NA	NA	-3	-69	intron_retention	FALSE	canonical	0	0	junction_14	28.9706924392249	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGGTAGTTTTTGTTT	8000	False	NA	-73	True	NA	NA	NA	3143442	3081958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.12	chr11	-	4395	14	Fusion	ENSMUSG00000081208.2_ENSMUSG00000023764.19	novel	914	8	NA	NA	2	213	intron_retention	FALSE	canonical	0	0	junction_1	38.4584614153748	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGTCCATGGCCAAGT	8023	False	NA	NA	False	AATAAA	-15	NA	3143419	3099528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_3101490_3103431_3103499_3105398_3105497_3106771_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120644_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.13	chr11	-	2169	14	NNC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	0	664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.9757322834446	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCCCTCAGTTATTTT	7979	False	NA	NA	False	AGTAAA	-16	NA	3143463	3102719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115253_3115322_3115575_3115679_3120586_3120705_3129450_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.14	chr11	-	657	5	ISM	ENSMUSG00000023764.19	ENSMUST00000138126.8	2916	22	-10	44350	-7	6286	5prime_fragment	FALSE	canonical	3	72	junction_1	15.833114033569	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTTAAAAATCCTTTT	8011	False	NA	NA	False	AGTAAA	-18	NA	3143431	3129281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.15	chr11	-	1554	4	ISM	ENSMUSG00000023764.19	ENSMUST00000142315.8	914	8	-10	19432	5	560	5prime_fragment	FALSE	canonical	0	0	junction_2	51.6333225737023	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACACATCGGTATACGTG	8008	False	NA	NA	False	NA	NA	NA	3143434	3135007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3136137_3137239_3137411_3138877_3139057_3143359
ES.4100.16	chr11	-	845	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	-11	-3	4	3	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTGCACTTTGTTATT	8007	False	NA	NA	False	NA	NA	NA	3143435	3135564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.2	chr11	-	4353	34	Fusion	ENSMUSG00000086049.2_ENSMUSG00000023764.19	novel	3898	32	NA	NA	-8285	0	multi-exon	FALSE	canonical	0	0	junction_33	28.280277662767	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTCCTACTTTTCATA	5232	False	NA	-1	True	AATGAA	-16	NA	3152548	3081886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359_3143715_3143811_3143905_3152431
ES.4100.3	chr11	-	3962	33	FSM	ENSMUSG00000023764.19	ENSMUST00000081318.13	3969	33	-31	38	1	0	multi-exon	FALSE	canonical	0	0	junction_15	28.2531628483874	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8004	False	NA	-2	True	AATGAA	-15	NA	3143438	3081887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.4	chr11	-	2216	17	NNC	ENSMUSG00000023764.19	novel	3969	33	NA	NA	1420	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.6684396159924	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	9855	False	NA	-2	True	AATGAA	-15	NA	3094936	3081887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3082132_3082215_3082328_3082872_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791
ES.4100.5	chr11	-	4866	31	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	2	0	intron_retention	FALSE	canonical	2	8	junction_15	28.0733364996436	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	8005	False	NA	-2	True	AATGAA	-15	NA	3143437	3081887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.6	chr11	-	3819	23	NIC	ENSMUSG00000023764.19	novel	3969	33	NA	NA	4572	0	intron_retention	FALSE	canonical	0	0	junction_15	17.8471471433679	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTCTCCTACTTTTCA	NA	False	NA	-3	True	AATGAA	-14	NA	3110025	3081888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3107937_3109984
ES.4100.7	chr11	-	5543	29	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-2	-1	intron_retention	FALSE	canonical	2	8	junction_13	28.4194843696492	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAAGTCTCCTACTTTT	8001	False	NA	-5	True	AATGAA	-12	NA	3143441	3081890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.8	chr11	-	3913	31	NIC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	1	-7	intron_retention	FALSE	canonical	2	8	junction_14	28.1168395568682	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTCAGAAGTCTCCT	8032	False	NA	-11	True	AATGAA	-6	NA	3143410	3081896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ES.4100.9	chr11	-	2410	20	NNC	ENSMUSG00000023764.19	novel	3898	32	NA	NA	-1506	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	19.0188709318809	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGTTCAGAAGTCTC	6473	False	NA	-13	True	AATGAA	-4	NA	3144969	3081898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3096425_3096478_3144953
ES.4101.1	chr11	-	162	1	Intergenic	novelGene_3154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGGC	NA	False	NA	NA	False	NA	NA	NA	3158382	3158220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3158200_3158400
ES.4102.1	chr11	-	173	1	Intergenic	novelGene_3155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	9176	False	NA	NA	False	NA	NA	NA	3164148	3163975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3164000_3164100
ES.4103.1	chr11	-	5332	2	Antisense	novelGene_ENSMUSG00000020454.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGGCTCAGCTGTTAAG	NA	False	NA	NA	False	NA	NA	NA	3181269	3173350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3174807_3177393
ES.4103.2	chr11	-	2304	1	Antisense	novelGene_ENSMUSG00000020454.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACGGCTCAGCTGTTAAG	1030	False	NA	NA	False	NA	NA	NA	3175654	3173350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3173400_3175700
ES.4103.3	chr11	-	3147	4	Antisense	novelGene_ENSMUSG00000020454.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3181269	3173380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3174807_3177393_3177528_3177702_3177884_3179863
ES.4104.1	chr11	-	5566	1	Antisense	novelGene_ENSMUSG00000020454.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8988	False	NA	NA	False	NA	NA	NA	3189551	3183985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3184000_3189600
ES.4105.1	chr11	+	153	1	Intergenic	novelGene_3157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	168	False	NA	NA	False	NA	NA	NA	3204148	3204301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3204100_3204300
ES.4106.1	chr11	+	158	1	Intergenic	novelGene_3158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAACAAAACGAA	7079	False	NA	NA	False	NA	NA	NA	3211059	3211217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3211100_3211200
ES.4107.1	chr11	+	1193	1	Antisense	novelGene_ENSMUSG00000020457.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTGTAAAATAAGGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	3215794	3216987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3215800_3217000
ES.4108.1	chr11	-	4148	10	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	-6	5105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.233884385569	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTCTCTGTAAACTTT	NA	False	NA	NA	False	AGTAAA	-19	NA	3216399	3194801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3196797_3199305_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.12	chr11	-	3053	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-20	-1487	2	1487	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGAACTGTGGAATT	NA	False	NA	NA	False	NA	NA	NA	3216413	3198419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.15	chr11	-	1903	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	27	-384	26	384	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGCCTCTCTTTCCACT	NA	False	NA	NA	False	NA	NA	NA	3216366	3199522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.16	chr11	-	1668	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-116	-6	-94	6	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTGCTGTGTGATGA	NA	False	NA	5	True	TATAAA	-40	NA	3216509	3199900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.18	chr11	-	1356	8	NIC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	7	-14	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	666.583705722465	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGTCGTTATTCATG	NA	False	NA	-15	True	TATAAA	-20	NA	3216385	3199920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3200366_3202159_3202283_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.20	chr11	-	1678	9	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	288	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	643.840818836457	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTGTCGTTATTCAT	NA	False	NA	-16	True	TATAAA	-19	NA	3216104	3199921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3215832
ES.4108.27	chr11	-	1158	7	NIC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	25	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	952.421956557771	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCGTTATTCA	NA	False	NA	-17	True	TATAAA	-18	NA	3216367	3199922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3209305_3209376_3214766_3214891_3216268
ES.4108.28	chr11	-	2381	8	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	13	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	886.284194527572	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCGTTATTCA	NA	False	NA	-17	True	TATAAA	-18	NA	3216379	3199922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3200366_3202159_3202283_3202643_3203570_3204234_3204643_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.3	chr11	-	1340	9	NNC	ENSMUSG00000020457.14	novel	488	4	NA	NA	7	4859	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	651.707360994948	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCATAATTAATCCAATGA	NA	False	NA	NA	False	ATTAAA	-20	NA	3216385	3195047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3195309_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.31	chr11	-	2896	8	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	12	16	11	-16	intron_retention	FALSE	canonical	3	1733	junction_5	103.695787409762	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCGTTATTCA	NA	False	NA	-17	True	TATAAA	-18	NA	3216381	3199922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766
ES.4108.33	chr11	-	1623	10	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	7	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	814.715461956269	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGGCCATGTGTCGTT	NA	False	NA	-22	True	TATAAA	-13	NA	3216385	3199927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3200366_3201647_3201754_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.34	chr11	-	1319	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-4	231	-4	-41	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCACAATTTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	3216397	3200137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.36	chr11	-	4103	3	NNC	ENSMUSG00000020457.14	novel	350	3	NA	NA	325	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCAGAATAAAAGATTTG	NA	False	NA	NA	False	NA	NA	NA	3212211	3207822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3208472_3208605_3209849_3210000
ES.4108.4	chr11	-	3859	10	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	35	4859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	618.233884385569	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCATAATTAATCCAATGA	NA	False	NA	NA	False	ATTAAA	-20	NA	3216357	3195047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3196796_3199305_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.5	chr11	-	4545	7	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	-101	3128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	716.946941318998	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGGCATAGTCTACC	NA	False	NA	NA	False	NA	NA	NA	3212637	3196778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3200366_3202159_3202283_3202643_3202812_3204364_3204643_3206542_3206713_3209305_3209376_3212488
ES.4108.6	chr11	-	4668	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	6	-3128	5	3128	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGGCATAGTCTACC	NA	False	NA	NA	False	NA	NA	NA	3216387	3196778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.7	chr11	-	4411	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-4	-2861	-4	2861	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAATGGTGTATGTGTGTG	NA	False	NA	NA	False	AAAAAG	-6	NA	3216397	3197045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4108.8	chr11	-	5101	1	Genic_Genomic	ENSMUSG00000020457.14	novel	NA	NA	NA	NA	538	2860	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGAATGGTGTATGTGTGT	1199	False	NA	NA	False	AAAAAG	-5	NA	3202147	3197046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_3197000_3202100
ES.4108.9	chr11	-	3921	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	-60	-2315	-38	2315	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTGTTTTCTATTT	NA	False	NA	3	True	NA	NA	NA	3216453	3197591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ES.4109.1	chr11	+	4269	5	NIC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-98	9	combination_of_known_junctions	TRUE	canonical	2	5	junction_1	169.237998097354	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCCCGAGTCCACTTTT	4789	False	NA	23	True	ATTAAA	-25	NA	3238775	3259092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3239348_3239868_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.11	chr11	+	4471	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-730	-568	-266	568	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTCTTTTTCT	5740	False	NA	2	True	AAGAAA	-6	NA	3239726	3259651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ES.4109.12	chr11	+	3920	5	FSM	ENSMUSG00000020453.18_ENSMUSG00000084941.2	ENSMUST00000123983.8	1249	5	-1731	-940	-265	-1	multi-exon	FALSE	canonical	1	7	junction_3	164.958138629169	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	5741	False	NA	13	True	ATTAAA	-15	NA	3239727	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3244455_3244548_3249033_3249206_3257647
ES.4109.13	chr11	+	3425	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-541	234	-95	-234	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAACTTGGCTAGTTGTT	5911	False	NA	-44	True	ATTAAA	-20	NA	3239897	3258849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.14	chr11	+	3298	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-78	-236	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	167.614140214959	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAACTTGGCTAGTTG	5928	False	NA	-46	True	ATTAAA	-18	NA	3239914	3258847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647_3257881_3257988
ES.4109.16	chr11	+	3225	4	NNC	ENSMUSG00000020453.18	novel	3118	4	NA	NA	-203	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	197.757989022497	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGCCTGCTCCCCCG	6249	False	NA	12	True	ATTAAA	-14	NA	3240235	3259081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249112_3257647
ES.4109.17	chr11	+	5195	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-173	13872	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	171.270801656324	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGTATGTGTTTTTT	6279	False	NA	NA	False	TTTAAA	-22	NA	3240265	3272955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647_3259699_3271666
ES.4109.18	chr11	+	3128	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-190	235	-172	-235	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAACTTGGCTAGTTGT	6280	False	NA	-45	True	ATTAAA	-19	NA	3240266	3258848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ES.4109.19	chr11	+	3430	5	FSM	ENSMUSG00000020453.18	ENSMUST00000110043.8	3702	5	274	-2	-172	2	multi-exon	FALSE	canonical	0	0	junction_4	207.771960331513	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGCTCCCCCGAGTC	6280	False	NA	16	True	ATTAAA	-18	NA	3240266	3259085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256222_3256361_3257647
ES.4109.2	chr11	+	3229	4	NIC	ENSMUSG00000020453.18	novel	2930	3	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	182.895234127811	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	5186	False	NA	NA	False	GATAAA	-17	NA	3239172	3245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3239348_3239868_3241885_3243279_3243344_3244455
ES.4109.20	chr11	+	4171	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-168	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	209.752681746861	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6284	False	NA	14	True	ATTAAA	-16	NA	3240270	3259083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3255475_3256361_3257647
ES.4109.21	chr11	+	7257	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-166	-3973	-166	3973	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAACCAGTTCACTTTCT	6286	False	NA	NA	False	NA	NA	NA	3240272	3263056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.23	chr11	+	3238	6	NNC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	-156	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	191.723759612626	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	6296	False	NA	13	True	ATTAAA	-15	NA	3240282	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647_3257881_3257988
ES.4109.24	chr11	+	3369	6	NNC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	-131	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.43050431615	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTCTGCCTGCTCCCCC	6321	False	NA	11	True	ATTAAA	-13	NA	3240307	3259080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257506_3257557_3257647
ES.4109.25	chr11	+	4606	4	ISM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	-147	1	-129	-1	intron_retention	FALSE	canonical	3	92	junction_3	154.389838468153	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	6323	False	NA	13	True	ATTAAA	-15	NA	3240309	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287
ES.4109.26	chr11	+	2129	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-115	1104	-115	-163	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTCAGATTGTTCAGTC	6337	False	NA	NA	False	NA	NA	NA	3240323	3257979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.27	chr11	+	2836	6	NNC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	-100	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.43050431615	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	6352	False	NA	13	True	ATTAAA	-15	NA	3240338	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3240452_3240905_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ES.4109.28	chr11	+	7794	4	Fusion	ENSMUSG00000020453.18_ENSMUSG00000084941.2	novel	1249	5	NA	NA	-94	4	intron_retention	FALSE	canonical	3	69	junction_2	144.444529914505	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTCCCCCGAGTCCA	6358	False	NA	18	True	ATTAAA	-20	NA	3240344	3259087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_3241885_3243279_3243344_3244455_3249206_3257647
ES.4109.3	chr11	+	1841	4	FSM	ENSMUSG00000020453.18	ENSMUST00000101644.10	1853	4	9	3	9	-3	multi-exon	FALSE	canonical	3	21	junction_1	164.248456782874	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTCTGCCTGCTCCCCC	5189	False	NA	11	True	ATTAAA	-13	NA	3239175	3259080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3239348_3243279_3243344_3249033_3249206_3257647
ES.4109.30	chr11	+	4751	6	NNC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	145	13694	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	193.43050431615	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTGTGTGTACACCAT	6615	False	NA	NA	False	NA	NA	NA	3240601	3272777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256358_3257647_3259699_3271666
ES.4109.31	chr11	+	6931	5	NIC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	-182	0	intron_retention	FALSE	canonical	0	0	junction_4	162.623030349333	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	7290	False	NA	14	True	ATTAAA	-16	NA	3241276	3259083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3241885_3243279_3243344_3244455_3249206_3256287_3256361_3257647
ES.4109.32	chr11	+	1704	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	282	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	167.614140214959	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATCTCTGCCTGCTCCCC	7754	False	NA	10	True	ATTAAA	-12	NA	3241740	3259079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647_3257881_3257988
ES.4109.33	chr11	+	1098	3	NNC	ENSMUSG00000020453.18	novel	1853	4	NA	NA	253	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	28.5	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGAGGCTTTGTGTG	8461	False	NA	NA	False	GATAAA	-13	NA	3242447	3245425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3242512_3243279_3243344_3244455
ES.4109.34	chr11	+	6347	3	Fusion	ENSMUSG00000020453.18_ENSMUSG00000084941.2	novel	1249	5	NA	NA	314	-1	intron_retention	FALSE	canonical	3	69	junction_1	103.5	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	9195	False	NA	13	True	ATTAAA	-15	NA	3243181	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_3243344_3244455_3249206_3257647
ES.4109.35	chr11	+	4514	1	NIC	ENSMUSG00000084941.2	novel	873	6	NA	NA	1297	-5916	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAACAACCTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	3260292	3264806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3260300_3264800
ES.4109.36	chr11	+	3919	1	NIC	ENSMUSG00000084941.2	novel	873	6	NA	NA	2864	-4944	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	3261859	3265778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3261900_3265800
ES.4109.37	chr11	+	7132	2	NNC	ENSMUSG00000084941.2	novel	873	6	NA	NA	10229	5676	intron_retention	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAACAA	2704	False	NA	NA	False	NA	NA	NA	3269224	3276398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3273373_3273414
ES.4109.4	chr11	+	3893	6	NIC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	20	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	192.475868617341	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCCCCCGAGTCCACT	5235	False	NA	20	True	ATTAAA	-22	NA	3239221	3259089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3239348_3239868_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ES.4109.5	chr11	+	3350	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	-420	0	292	0	multi-exon	FALSE	canonical	3	69	junction_2	176	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	5586	False	NA	NA	False	GATAAA	-17	NA	3239572	3245429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3244455
ES.4109.6	chr11	+	3928	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-811	1	347	-1	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCCTGCTCCCCCGA	5641	False	NA	13	True	ATTAAA	-15	NA	3239627	3259082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.7	chr11	+	4508	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	-808	-582	350	582	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTTTTTTTTTTTT	5644	False	NA	16	True	AAGAAA	-20	NA	3239630	3259665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ES.4109.8	chr11	+	3976	5	NNC	ENSMUSG00000020453.18	novel	3173	5	NA	NA	-342	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	189.564467925822	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	5664	False	NA	14	True	ATTAAA	-16	NA	3239650	3259083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256358_3257647
ES.4109.9	chr11	+	3936	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-324	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	209.752681746861	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTGCCTGCTCCCCCG	5682	False	NA	12	True	ATTAAA	-14	NA	3239668	3259081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257506_3257557_3257647
ES.411.1	chr1	+	5032	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAGATTCTGGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	45773421	45778453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_45773400_45778500
ES.4110.1	chr11	-	2577	1	Antisense	novelGene_ENSMUSG00000084941.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAATATGTCTTT	4159	False	NA	NA	False	NA	NA	NA	3262241	3259664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3259700_3262200
ES.4110.2	chr11	-	2203	1	Antisense	novelGene_ENSMUSG00000084941.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTCCTGTAGAACAGC	4159	False	NA	NA	False	NA	NA	NA	3262241	3260038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3260000_3262200
ES.4111.1	chr11	+	239	1	Intergenic	novelGene_3159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATTATTTGTTAAAGA	NA	False	NA	NA	False	AAAAAG	-16	NA	3277881	3278120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3277900_3278100
ES.4112.1	chr11	+	1894	4	FSM	ENSMUSG00000034614.15	ENSMUST00000136474.2	617	4	-2	-1275	-2	-4	multi-exon	FALSE	canonical	2	2	junction_1	6.0184900284226	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTTTTTTGTGGTGAT	NA	False	NA	NA	False	TATAAA	-21	NA	3282448	3292967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3282615_3283208_3283413_3283504_3283584_3291522
ES.4112.2	chr11	+	1519	2	NNC	ENSMUSG00000034614.15	novel	2573	6	NA	NA	717	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGCACCTTTTTTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	3285097	3292962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3285177_3291522
ES.4112.3	chr11	+	1578	2	NNC	ENSMUSG00000034614.15	novel	2573	6	NA	NA	1610	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTTTTTTGTGGTGATG	NA	False	NA	NA	False	TATAAA	-22	NA	3285990	3292968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3286123_3291522
ES.4113.1	chr11	+	1864	2	Antisense	novelGene_ENSMUSG00000087055.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAGCTGCTGTGTTTAC	7371	False	NA	NA	False	AATAAA	-20	NA	3300653	3303972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3300792_3302246
ES.4114.1	chr11	+	175	1	Intergenic	novelGene_3162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAATAAAAAAAAAAA	6644	False	NA	NA	False	NA	NA	NA	3339146	3339321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3339100_3339300
ES.4115.1	chr11	-	2483	1	Antisense	novelGene_ENSMUSG00000034614.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTGTTTAAATCAA	NA	False	NA	NA	False	AATAAA	-13	NA	3292056	3289573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3289600_3292100
ES.4115.10	chr11	-	4409	15	NIC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	97	junction_13	51.641227004503	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	3359171	3294256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.11	chr11	-	4604	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAGAGAGTGCCAA	9800	False	NA	-8	True	AATAAA	-17	NA	3321390	3294257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.12	chr11	-	3780	15	NNC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	67.4615914912375	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGATGACAGAGAGTGCC	9796	False	NA	-10	True	AATAAA	-15	NA	3321394	3294259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302451_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.13	chr11	-	3371	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-49	192	-34	-192	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTTCTTGCTGTGTAG	NA	False	NA	-8	True	AATGAA	-23	NA	3359223	3294447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.14	chr11	-	4406	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-14	-200	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGCCACTTTTCTTG	9800	False	NA	-16	True	AATGAA	-15	NA	3321390	3294455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.15	chr11	-	3521	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-28	200	-28	-200	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGCCACTTTTCTTG	9786	False	NA	-16	True	AATGAA	-15	NA	3321404	3294455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.16	chr11	-	5526	10	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-1519	-202	intron_retention	FALSE	canonical	3	194	junction_7	20.96027989635	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTGGCCACTTTTCT	NA	False	NA	-18	True	AATGAA	-13	NA	3308279	3294457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3305470_3305810_3305917_3308109
ES.4115.17	chr11	-	3252	15	NNC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	114	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	63.7601132434403	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTGGCCACTTTTCT	NA	False	NA	-18	True	AATGAA	-13	NA	3319048	3294457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3318879
ES.4115.18	chr11	-	4212	15	NIC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	-1	-202	intron_retention	FALSE	canonical	3	97	junction_13	51.641227004503	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTGGCCACTTTTCT	NA	False	NA	-18	True	AATGAA	-13	NA	3359175	3294457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.2	chr11	-	7225	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-15	-3517	-15	3517	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTGTCAATGTCTTT	9799	False	NA	NA	False	ATTAAA	-42	NA	3321391	3290738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.20	chr11	-	3320	15	NNC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-14	-204	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	62.3787395100057	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTCTTTGGCCACTTTT	9800	False	NA	-20	True	AATGAA	-11	NA	3321390	3294459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3321151
ES.4115.21	chr11	-	5597	14	NNC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	9	-205	intron_retention	FALSE	canonical	1	2	junction_12	69.0718689259461	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGTCTTTGGCCACTTT	9823	False	NA	-21	True	AATGAA	-10	NA	3321367	3294460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3309231_3310587_3320968
ES.4115.22	chr11	-	3000	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-13	706	-13	-706	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGTTTGCCTCAGAC	9801	False	NA	NA	False	NA	NA	NA	3321389	3294961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.23	chr11	-	2589	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-102	1206	-102	-1206	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGGACTACTTGGGACC	9712	False	NA	-7	True	GATAAA	-31	NA	3321478	3295461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.24	chr11	-	3388	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	-13	-1217	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTGTTACTCGGGAC	9801	False	NA	-18	True	GATAAA	-20	NA	3321389	3295472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.26	chr11	-	2295	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	1	1218	1	-1218	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGTCTGTTACTCGGGA	NA	False	NA	-19	True	GATAAA	-19	NA	3359173	3295473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.27	chr11	-	4966	14	NIC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	35	-1221	intron_retention	FALSE	canonical	3	97	junction_12	53.2937599731057	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	-22	True	GATAAA	-16	NA	3359139	3295476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.28	chr11	-	3152	15	NNC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	37	-1222	intron_retention	FALSE	non_canonical	0	0	junction_1	74.1965123774669	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAGAGTCTGTTACTC	NA	False	NA	-23	True	GATAAA	-15	NA	3359137	3295477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296236_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.29	chr11	-	4824	2	NIC	ENSMUSG00000020451.18	novel	473	4	NA	NA	-5950	-356	intron_retention	FALSE	canonical	3	230	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCAGCAGGAGATGAGA	NA	False	NA	NA	False	NA	NA	NA	3312710	3306540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3309105_3310450
ES.4115.3	chr11	-	3991	8	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	2852	-719	-472	719	intron_retention	FALSE	canonical	3	194	junction_7	21.9860809400412	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTCCTGTGGTAGAAGA	NA	False	NA	NA	False	TATAAA	-20	NA	3303289	3293536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290
ES.4115.30	chr11	-	3645	4	NNC	ENSMUSG00000020451.18	novel	3849	16	NA	NA	-14	-356	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	119.074206554848	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCAGCAGGAGATGAGA	9800	False	NA	NA	False	NA	NA	NA	3321390	3306540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3308299_3308994_3309105_3309231_3310587_3320968
ES.4115.31	chr11	-	3723	3	NIC	ENSMUSG00000020451.18	novel	3849	16	NA	NA	-6	-356	intron_retention	FALSE	canonical	3	120	junction_2	86	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCAGCAGGAGATGAGA	9849	False	NA	NA	False	NA	NA	NA	3321341	3306540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3308299_3308994_3310587_3320968
ES.4115.32	chr11	-	2427	4	ISM	ENSMUSG00000020451.18	ENSMUST00000101640.10	3711	16	-15	12285	-15	-356	5prime_fragment	FALSE	canonical	3	120	junction_3	71.1243043316887	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTCAGCAGGAGATGAGA	9799	False	NA	NA	False	NA	NA	NA	3321391	3306540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.33	chr11	-	851	6	NNC	ENSMUSG00000020451.18	novel	473	4	NA	NA	2	894	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.096877955105	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	3359172	3307357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3307547_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.34	chr11	-	1383	5	ISM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	32	13103	32	893	5prime_fragment	FALSE	canonical	3	97	junction_3	84.1616747694579	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3359142	3307358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.35	chr11	-	176	1	Intergenic	novelGene_3160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAGAAGGAG	3326	False	NA	NA	False	NA	NA	NA	3332498	3332322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3332300_3332500
ES.4115.36	chr11	-	224	1	Intergenic	novelGene_3161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTCAATTCCCAACA	2008	False	NA	NA	False	NA	NA	NA	3333816	3333592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3333600_3333800
ES.4115.37	chr11	-	312	2	FSM	ENSMUSG00000020451.18	ENSMUST00000145223.2	400	2	69	19	54	-19	multi-exon	FALSE	canonical	2	5	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCTGAAAGGTA	NA	False	NA	NA	False	AATAAA	-10	NA	3359120	3346797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3347035_3359045
ES.4115.38	chr11	-	2023	1	NIC	ENSMUSG00000020451.18	novel	400	2	NA	NA	10354	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCTGAAAGGTA	7363	False	NA	NA	False	AATAAA	-10	NA	3348820	3346797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3346800_3348800
ES.4115.39	chr11	-	4228	1	NIC	ENSMUSG00000020451.18	novel	3514	16	NA	NA	105	-8063	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATAGACTCCTTCCTCCCT	NA	False	NA	NA	False	AATAAA	-34	NA	3359069	3354841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3354800_3359100
ES.4115.4	chr11	-	2649	4	NIC	ENSMUSG00000020451.18	novel	2939	12	NA	NA	4131	713	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	106.646873163518	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAAGCGTCCTGTGGT	NA	False	NA	NA	False	TATAAA	-14	NA	3298686	3293542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3298593
ES.4115.5	chr11	-	3747	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	2	-235	2	235	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGCTGGCCACTTT	NA	False	NA	NA	False	AAGAAA	-1	NA	3359172	3294020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.6	chr11	-	3943	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-15	-235	-15	235	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTGCTGGCCACTTT	9799	False	NA	NA	False	AAGAAA	-1	NA	3321391	3294020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.7	chr11	-	3578	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-54	-10	-39	10	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCAAAGTGACTTAGGG	NA	False	NA	4	True	AATAAA	-29	NA	3359228	3294245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ES.4115.8	chr11	-	3722	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	-28	-1	-28	1	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGAGAGTGCCAAAGT	9786	False	NA	-5	True	AATAAA	-20	NA	3321404	3294254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ES.4115.9	chr11	-	2327	6	NNC	ENSMUSG00000020451.18	novel	2939	12	NA	NA	4131	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.29532492495	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGACAGAGAGTGCCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	3298686	3294256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3297840_3298058_3298593
ES.4116.1	chr11	+	196	1	Intergenic	novelGene_3163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGTCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	3371145	3371341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3371100_3371300
ES.4117.1	chr11	+	155	1	Intergenic	novelGene_3164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTGTTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3387465	3387620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3387500_3387600
ES.4118.1	chr11	+	442	1	Intergenic	novelGene_3166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3399099	3399541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3399100_3399500
ES.4119.1	chr11	-	5421	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	91	-2725	62	2725	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAAAACCCTGTCAT	6906	False	NA	NA	False	NA	NA	NA	3402272	3363256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ES.4119.11	chr11	-	2694	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	44	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	55.8161267018771	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAGTGTGGAGCTTGT	6888	False	NA	-6	True	ATTAAA	-13	NA	3402290	3365982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382399_3382621_3402208
ES.4119.12	chr11	-	2756	6	NNC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	62.7279841856886	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAGTGTGGAGCTTGT	6839	False	NA	-6	True	ATTAAA	-13	NA	3402339	3365982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376688_3382395_3382621_3402208
ES.4119.15	chr11	-	2675	5	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	-23	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	66.8374894800815	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGAGTGTGGAGCTT	6792	False	NA	-8	True	ATTAAA	-11	NA	3402386	3365984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3368088_3369861_3369980_3375281_3375337_3382399_3382621_3402208
ES.4119.17	chr11	-	1019	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	92	1676	63	218	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATGGTATTTACAGA	6907	False	NA	NA	False	AAGAAA	-45	NA	3402271	3367657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ES.4119.18	chr11	-	157	1	Intergenic	novelGene_3165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	2062	False	NA	NA	False	NA	NA	NA	3391305	3391148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3391100_3391300
ES.4119.2	chr11	-	2795	7	NNC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	18364	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.4245882295497	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGAGCTTGTGTC	9397	False	NA	-3	True	ATTAAA	-16	NA	3383970	3365979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3383809
ES.4119.3	chr11	-	2764	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	24	-1	-5	1	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6839	False	NA	-4	True	ATTAAA	-15	NA	3402339	3365980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ES.4119.4	chr11	-	2527	6	FSM	ENSMUSG00000020448.17	ENSMUST00000144055.2	643	6	11	-1895	11	1	multi-exon	FALSE	canonical	1	1	junction_5	57.6485906159032	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6855	False	NA	-4	True	ATTAAA	-15	NA	3402323	3365980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3402208
ES.4119.5	chr11	-	2736	6	NNC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.3266663506809	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTGGAGCTTGTGT	6859	False	NA	-4	True	ATTAAA	-15	NA	3402319	3365980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376694_3382399_3382617_3402208
ES.4119.7	chr11	-	2728	6	NNC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.7279841856886	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAGTGTGGAGCTTGT	6878	False	NA	-6	True	ATTAAA	-13	NA	3402300	3365982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3382375_3382621_3402208
ES.4119.8	chr11	-	3973	6	NIC	ENSMUSG00000020448.17	novel	2787	7	NA	NA	13	-1	intron_retention	FALSE	canonical	3	133	junction_2	19.177069640589	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAGTGTGGAGCTTGT	6857	False	NA	-6	True	ATTAAA	-13	NA	3402321	3365982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3368088_3369861_3369980_3375281_3376679_3378883_3378903_3382399_3382621_3402208
ES.412.1	chr1	+	2993	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	-11	-29	-11	29	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGCTAAGTACCT	NA	False	NA	37	True	ATTAAA	-23	NA	45834314	45862808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.10	chr1	+	2615	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	143.804589634684	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTAAAGCCTTGTGTTT	NA	False	NA	6	True	TATAAA	-22	NA	45834651	45862777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841208_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.11	chr1	+	6598	17	NIC	ENSMUSG00000025995.17	novel	3226	20	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	553	junction_3	52.225472712078	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834657	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858819_45859290_45859351_45861607_45862135_45862467
ES.412.12	chr1	+	2840	20	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_14	191.520942635901	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834657	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852466_45853704_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857843_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.16	chr1	+	808	6	ISM	ENSMUSG00000025995.17	ENSMUST00000154436.8	3226	20	59	17929	1	228	5prime_fragment	FALSE	canonical	3	530	junction_5	70.1843287351243	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTGGCCTGGTGAT	NA	False	NA	NA	False	AATAAA	-14	NA	45834667	45844835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536
ES.412.18	chr1	+	6477	18	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	2	19	intron_retention	FALSE	canonical	3	553	junction_3	51.1284426426116	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTATGTGCTTG	NA	False	NA	27	True	ATTAAA	-13	NA	45834668	45862798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.2	chr1	+	5244	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	89	-2380	89	2380	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGATAGATATGTCAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	45834414	45865159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.20	chr1	+	5838	17	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	3	0	intron_retention	FALSE	canonical	3	553	junction_3	40.2379154995633	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834669	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.21	chr1	+	2589	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	144.017663847182	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834670	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852250_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.23	chr1	+	2598	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	143.86243429054	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834670	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861617_45861755_45862042_45862135_45862467
ES.412.24	chr1	+	5355	20	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_4	146.978186332591	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834670	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45844166_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.26	chr1	+	5804	18	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	15	0	intron_retention	FALSE	canonical	3	553	junction_3	50.640055538215	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834681	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.27	chr1	+	2927	20	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	359	0	18	0	intron_retention	FALSE	canonical	3	530	junction_5	52.4393331051196	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834684	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042
ES.412.28	chr1	+	2795	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.618336829455	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834688	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834970_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.3	chr1	+	4434	20	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	1	18	intron_retention	FALSE	canonical	3	530	junction_4	52.5397620169504	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTATGTGCTT	NA	False	NA	26	True	ATTAAA	-12	NA	45834609	45862797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.30	chr1	+	2575	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	144.021352583567	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834693	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845838_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.31	chr1	+	2316	18	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	6871	4	48	-1	3prime_fragment	FALSE	canonical	3	530	junction_2	45.2860955462821	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45841196	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.32	chr1	+	4865	16	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	625	0	intron_retention	FALSE	canonical	3	558	junction_7	43.0572745176572	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45841773	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.33	chr1	+	2866	1	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	684	1788	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAATCAAATAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	45843529	45846395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45843500_45846400
ES.412.34	chr1	+	1820	13	ISM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	16873	4	-2639	-1	3prime_fragment	FALSE	canonical	3	558	junction_4	47.1757941698447	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45851198	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.4	chr1	+	4067	20	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	7	29	intron_retention	FALSE	canonical	3	553	junction_3	48.4054322630857	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGCTAAGTACCT	NA	False	NA	37	True	ATTAAA	-23	NA	45834615	45862808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.5	chr1	+	3387	20	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	9	0	intron_retention	FALSE	canonical	3	530	junction_5	52.4537522192994	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834617	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.7	chr1	+	2641	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	143.675711238887	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834629	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862123_45862463
ES.412.8	chr1	+	2628	21	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	141.026203238973	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAAAGCCTTGTGT	NA	False	NA	4	True	TATAAA	-20	NA	45834635	45862775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840331_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ES.412.9	chr1	+	5757	19	NNC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	-26	0	intron_retention	FALSE	non_canonical	0	0	junction_16	150.851124385584	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834636	45862779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859344_45861607_45861755_45862042_45862135_45862467
ES.4120.1	chr11	+	121	1	ISM	ENSMUSG00000034587.9	ENSMUST00000144844.2	505	2	26	4380	-9	-4380	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAATCATAGCATTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	3402462	3402583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3402500_3402600
ES.4120.2	chr11	+	1660	2	FSM	ENSMUSG00000034587.9	ENSMUST00000146456.2	1675	2	15	0	7	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATAAGGACTGTAGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	3402486	3408338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3402571_3406762
ES.4120.3	chr11	+	1581	1	NIC	ENSMUSG00000034587.9	novel	1675	2	NA	NA	4278	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATAAGGACTGTAGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	3406757	3408338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3406800_3408300
ES.4121.1	chr11	-	241	1	Intergenic	novelGene_3167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAAGTTGTATTTAT	NA	False	NA	NA	False	AATAAA	-32	NA	3431565	3431324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3431300_3431600
ES.4122.1	chr11	+	5197	1	Genic_Genomic	ENSMUSG00000034579.18	novel	NA	NA	NA	NA	3276	-1888	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGAGGGGGGGCAAAG	NA	False	NA	NA	False	AATAAA	-32	NA	3442265	3447462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_3442300_3447500
ES.4123.1	chr11	-	3355	13	FSM	ENSMUSG00000034570.13	ENSMUST00000044507.12	3370	13	8	7	8	0	multi-exon	TRUE	canonical	1	2	junction_6	1.60511335702152	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGCTCCTTCCTGACT	NA	False	NA	NA	False	ATTAAA	-14	NA	3454813	3444381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451163_3451319_3451429_3451524_3451639_3451986_3453144_3454643
ES.4123.2	chr11	-	3367	13	NNC	ENSMUSG00000034570.13	novel	3370	13	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	1.99304345718357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGGCTCCTTCCTGAC	NA	False	NA	NA	False	ATTAAA	-13	NA	3454798	3444382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3445167_3445346_3445480_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451163_3451319_3451429_3451524_3451639_3451986_3453144_3454643
ES.4123.3	chr11	-	3435	11	NNC	ENSMUSG00000034570.13	novel	3370	13	NA	NA	1	-3	intron_retention	TRUE	canonical	0	0	junction_2	2.41660919471891	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTTGGCTCCTTCCTG	NA	False	NA	NA	False	ATTAAA	-11	NA	3454820	3444384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3445167_3445346_3445452_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451429_3451524_3451639_3451986_3453141_3454643
ES.4123.5	chr11	-	3936	8	NIC	ENSMUSG00000034570.13	novel	3370	13	NA	NA	1	898	intron_retention	FALSE	canonical	1	2	junction_2	1.8070158058105	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTGGCAAATCTCTCT	NA	False	NA	NA	False	NA	NA	NA	3454798	3448051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451429_3451524_3451639_3451986_3453144_3454643
ES.4124.1	chr11	+	722	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	-14	-1	-14	1	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGTCTCTTCTTATTTG	NA	False	NA	23	True	ACTAAA	-15	NA	3464852	3467352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ES.4125.1	chr11	-	3347	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	-10	-2	-10	2	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTTTCTCTGCTGTC	8127	False	NA	-4	True	GATAAA	-19	NA	3489302	3467520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.10	chr11	-	3130	20	FSM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	-13	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.2906482011302	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8177	False	NA	-6	True	GATAAA	-17	NA	3489252	3467522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.11	chr11	-	3154	20	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.7100443902189	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8149	False	NA	-6	True	GATAAA	-17	NA	3489280	3467522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480186_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.12	chr11	-	2069	14	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.9264534733335	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8149	False	NA	-6	True	GATAAA	-17	NA	3489280	3467522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472899_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.13	chr11	-	3406	22	NNC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.3920422632921	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8156	False	NA	-6	True	GATAAA	-17	NA	3489273	3467522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480265_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.14	chr11	-	3384	22	NNC	ENSMUSG00000020439.18	novel	3348	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	30.1292755078907	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8180	False	NA	-7	True	GATAAA	-16	NA	3489249	3467523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.15	chr11	-	3221	20	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	23.7100443902189	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8178	False	NA	-7	True	GATAAA	-16	NA	3489251	3467523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.16	chr11	-	3363	22	NNC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	33.5154210284164	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGACTTTTCTCTGCT	8177	False	NA	-7	True	GATAAA	-16	NA	3489252	3467523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479631_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
ES.4125.18	chr11	-	6196	21	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.5339648168344	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCCTGACTTTTCTCTGC	8149	False	NA	-8	True	GATAAA	-15	NA	3489280	3467524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3470021_3470069_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.19	chr11	-	3321	21	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.549681526509	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATCCTGACTTTTCTCTGC	8167	False	NA	-8	True	GATAAA	-15	NA	3489262	3467524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479631_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.2	chr11	-	3447	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTTTCTCTGCTGTC	8135	False	NA	-4	True	GATAAA	-19	NA	3489294	3467520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.20	chr11	-	3429	22	NNC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.1450414262395	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	8165	False	NA	-10	True	GATAAA	-13	NA	3489264	3467526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476259_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.22	chr11	-	3854	21	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	8	563	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	25.1584975704035	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGTTTCTGGCTGGAT	8198	False	NA	NA	False	NA	NA	NA	3489231	3469974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.23	chr11	-	3045	20	ISM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	-3	3217	-3	-202	5prime_fragment	FALSE	canonical	3	70	junction_19	10.1643012249038	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTCCCACCTGTCTCAT	8134	False	NA	NA	False	AAAAAG	-39	NA	3489295	3470739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.24	chr11	-	3089	19	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-10	-209	intron_retention	FALSE	canonical	3	70	junction_18	10.4309901522126	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCGCCTCTCCCACCT	8167	False	NA	NA	False	AAAAAG	-32	NA	3489262	3470746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482855_3483374_3483524_3487322_3487437_3489111
ES.4125.25	chr11	-	3128	21	NNC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	19	-209	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.1123029382821	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCGCCTCTCCCACCT	8156	False	NA	NA	False	AAAAAG	-32	NA	3489273	3470746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.4	chr11	-	6325	21	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	0	1	intron_retention	FALSE	canonical	3	19	junction_19	25.1584975704035	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8180	False	NA	-5	True	GATAAA	-18	NA	3489249	3467521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.5	chr11	-	3418	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	3	junction_20	26.9567554922076	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8128	False	NA	-5	True	GATAAA	-18	NA	3489301	3467521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487670_3487744_3489111
ES.4125.6	chr11	-	7884	17	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	15	1	intron_retention	FALSE	canonical	3	90	junction_2	7.24110445650386	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	NA	False	NA	-5	True	GATAAA	-18	NA	3487383	3467521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322
ES.4125.7	chr11	-	3184	20	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	23.5356745779537	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8175	False	NA	-5	True	GATAAA	-18	NA	3489254	3467521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3489111
ES.4125.8	chr11	-	3382	22	NNC	ENSMUSG00000020439.18	novel	3348	22	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.4150042866632	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	8177	False	NA	-5	True	GATAAA	-18	NA	3489252	3467521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3467828_3470751_3470895_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
ES.4125.9	chr11	-	6260	20	NIC	ENSMUSG00000020439.18	novel	3335	21	NA	NA	-1	0	intron_retention	FALSE	canonical	3	70	junction_19	10.1643012249038	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8136	False	NA	-6	True	GATAAA	-17	NA	3489293	3467522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ES.4126.1	chr11	+	491	1	Intergenic	novelGene_3168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5046	False	NA	NA	False	NA	NA	NA	3536733	3537224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3536700_3537200
ES.4127.1	chr11	+	178	1	Intergenic	novelGene_3169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	3566504	3566682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3566500_3566700
ES.4128.1	chr11	+	5099	3	Antisense	novelGene_ENSMUSG00002075685.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAACATTTTCAGGAA	NA	False	NA	NA	False	NA	NA	NA	3589812	3597537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3593180_3594771_3595528_3596561
ES.4128.10	chr11	+	4495	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	-6	2	intron_retention	FALSE	canonical	0	0	junction_3	147.525271055504	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599184	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3608671_3608726_3611828_3611864_3614254_3614299_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.100	chr11	+	6063	24	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	49	2	intron_retention	FALSE	canonical	2	298	junction_18	52.9735105183257	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599239	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.103	chr11	+	6347	23	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	51	-1	intron_retention	FALSE	canonical	0	0	junction_11	103.207445756128	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599241	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628494_3628622_3629655_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.105	chr11	+	5744	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	51	1	intron_retention	FALSE	canonical	0	0	junction_1	123.651256103991	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCGTTCAGTACATTCT	NA	False	NA	76	True	TATAAA	-17	NA	3599241	3640478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607849_3607988_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.106	chr11	+	4432	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	51	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.947802284257	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599241	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.107	chr11	+	5686	25	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	51	-5	intron_retention	FALSE	canonical	2	109	junction_19	78.5793013281629	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599241	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.108	chr11	+	5419	26	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	57	-9	intron_retention	FALSE	canonical	1	1	junction_1	97.9691706609789	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAGACTCCTGCGTTC	NA	False	NA	66	True	TATAAA	-7	NA	3599247	3640468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600399_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.109	chr11	+	5513	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	57	-6	intron_retention	FALSE	canonical	1	2	junction_2	97.6228170050424	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599247	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611801_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.111	chr11	+	6326	25	ISM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	61	4	61	-4	intron_retention	FALSE	canonical	2	298	junction_20	48.8010238679021	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTCCTGCGTTCAGTAC	NA	False	NA	71	True	TATAAA	-12	NA	3599251	3640473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110
ES.4128.112	chr11	+	6004	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	61	-409	61	409	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCAGTATGGGTCTA	NA	False	NA	NA	False	NA	NA	NA	3599251	3640886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.113	chr11	+	4206	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	61	-1085	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_14	108.763416502199	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTAATGCCTGCTG	NA	False	NA	NA	False	CATAAA	-19	NA	3599251	3639285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.115	chr11	+	6297	25	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	61	0	intron_retention	FALSE	canonical	2	5	junction_1	113.848095675285	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599251	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3601065_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.12	chr11	+	5246	28	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	4	577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.644898088602	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTATCATTCTGCTCTCA	NA	False	NA	NA	False	TATAAA	-17	NA	3599194	3641054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3600359_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.122	chr11	+	4471	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	71	-1089	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAGATGTTAATGCCT	NA	False	NA	NA	False	CATAAA	-15	NA	3599261	3639281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.126	chr11	+	4585	28	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	72	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.644898088602	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599262	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599305_3600307_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.127	chr11	+	3775	21	ISM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	72	5301	72	1269	5prime_fragment	FALSE	canonical	3	298	junction_20	44.2092750449496	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATGTTTTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	3599262	3635176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837
ES.4128.129	chr11	+	5649	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	84	0	intron_retention	FALSE	non_canonical	0	0	junction_22	155.323031398567	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599274	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634889_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.13	chr11	+	5465	26	NIC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	13	-2	intron_retention	FALSE	canonical	2	110	junction_1	76.8706341849734	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGGCCCTGCATTTT	NA	False	NA	22	True	CATAAA	-15	NA	3599203	3640368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.131	chr11	+	6179	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	91	-3	intron_retention	FALSE	canonical	2	5	junction_1	96.5758064941733	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	False	NA	72	True	TATAAA	-13	NA	3599281	3640474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3601065_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.133	chr11	+	4209	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	94	-1088	at_least_one_novel_splicesite	FALSE	canonical	2	109	junction_21	96.2034410559514	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGATGTTAATGCCTG	NA	False	NA	NA	False	CATAAA	-16	NA	3599284	3639282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.134	chr11	+	5547	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	94	0	intron_retention	FALSE	canonical	0	0	junction_11	97.4436780915006	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599284	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628550_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.135	chr11	+	6872	24	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	108	507	intron_retention	FALSE	canonical	2	298	junction_19	49.7770834222583	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGAAAGCTGTGGT	NA	False	NA	NA	False	AATATA	-17	NA	3599298	3640984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110
ES.4128.136	chr11	+	6112	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	-81	-3	intron_retention	FALSE	canonical	0	0	junction_1	134.600268382053	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	False	NA	72	True	TATAAA	-13	NA	3599412	3640474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3601065_3607183_3607245_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.138	chr11	+	9146	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-7	-4054	-7	3947	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTAGAGAGATGTCTCA	NA	False	NA	NA	False	NA	NA	NA	3599486	3644424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.14	chr11	+	5790	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	13	-1	intron_retention	FALSE	canonical	1	1	junction_3	123.747954379124	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599203	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3614150_3614299_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.140	chr11	+	5278	29	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	-85	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	165.757887582819	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599673	3640475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3614150_3614299_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.141	chr11	+	4825	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	214	-6	intron_retention	FALSE	canonical	1	2	junction_1	134.377641710651	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599972	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607183_3607245_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.142	chr11	+	4662	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	218	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	132.93477468664	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGCCCTGCATTTTT	NA	False	NA	23	True	CATAAA	-16	NA	3599976	3640369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3607183_3607245_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.148	chr11	+	10186	25	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	3090	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_12	95.0635752185522	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3602848	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.149	chr11	+	6243	24	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	7656	505	intron_retention	FALSE	canonical	2	298	junction_18	50.6492068546927	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGTGAAGAAAGCTGTG	NA	False	NA	NA	False	AATATA	-15	NA	3607414	3640982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.150	chr11	+	5088	25	ISM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	8380	2	8115	-2	3prime_fragment	FALSE	canonical	2	298	junction_19	49.7485168678982	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGGCCCTGCATTTT	NA	False	NA	22	True	CATAAA	-15	NA	3607873	3640368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.151	chr11	+	4857	24	ISM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	12333	-617	12068	510	3prime_fragment	FALSE	canonical	2	298	junction_18	50.7778437311851	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGAAAGCTGTGGTATG	NA	False	NA	NA	False	AATATA	-20	NA	3611826	3640987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.154	chr11	+	10218	1	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	-8946	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGCAGGAGTTCAAGCA	NA	False	NA	NA	False	NA	NA	NA	3620960	3631178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3621000_3631200
ES.4128.155	chr11	+	6780	20	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	-6296	519	at_least_one_novel_splicesite	FALSE	canonical	2	109	junction_14	86.1009521504776	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGTATGTGTGTGCCT	NA	False	NA	NA	False	AATATA	-29	NA	3623610	3640996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.156	chr11	+	7670	12	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	-4278	-6	intron_retention	FALSE	canonical	0	0	junction_9	137.799171152253	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3625628	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3626216_3626641_3626768_3627402_3628310_3628535_3628622_3629655_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635657_3635883_3635975_3638300_3639034
ES.4128.157	chr11	+	6688	19	ISM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	26646	-2950	-3767	2843	3prime_fragment	FALSE	canonical	2	298	junction_13	55.9357270048004	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCTGACTAAAACTAA	NA	False	NA	NA	False	NA	NA	NA	3626139	3643320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.16	chr11	+	5569	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	14	-1	intron_retention	FALSE	canonical	1	1	junction_1	134.047373062108	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGCCCTGCATTTTT	NA	False	NA	23	True	CATAAA	-16	NA	3599204	3640369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3606169_3606202_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.162	chr11	+	3205	10	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	13	-4	intron_retention	FALSE	canonical	2	109	junction_5	114.699607671517	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTCCTGCGTTCAGTAC	NA	False	NA	71	True	TATAAA	-12	NA	3630279	3640473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634893_3635384_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.163	chr11	+	3107	9	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	1350	503	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	166.245300685463	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCTGTGAAGAAAGCTG	NA	False	NA	NA	False	AATATA	-13	NA	3631711	3640980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635975_3636070_3638110_3638300_3639034
ES.4128.164	chr11	+	3973	8	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	3180	502	intron_retention	FALSE	canonical	2	109	junction_3	115.582641165425	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACACCTGTGAAGAAAGCT	NA	False	NA	NA	False	AATATA	-12	NA	3633541	3640979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110
ES.4128.165	chr11	+	2280	7	ISM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	35119	-106	4251	-1	3prime_fragment	FALSE	canonical	2	298	junction_1	82.5604155889626	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3634612	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.166	chr11	+	3197	6	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	4332	502	intron_retention	FALSE	canonical	3	109	junction_1	145.026066622521	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACACCTGTGAAGAAAGCT	NA	False	NA	NA	False	AATATA	-12	NA	3634693	3640979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3634749_3634837_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.167	chr11	+	2168	5	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	4474	-6	intron_retention	FALSE	canonical	2	298	junction_1	80.4502952138772	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3634835	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3634893_3635384_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.168	chr11	+	3717	2	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	5663	-1	intron_retention	FALSE	canonical	3	515	junction_1	0	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3636024	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3638300_3639034
ES.4128.17	chr11	+	3132	1	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	14	-17074	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTTATTGTACACA	NA	False	NA	NA	False	ATTAAA	-18	NA	3599204	3602336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3599200_3602300
ES.4128.19	chr11	+	5469	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	14	-5	intron_retention	FALSE	canonical	1	2	junction_26	95.9025948153004	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599204	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034_3639173_3639340
ES.4128.2	chr11	+	3975	2	Antisense	novelGene_ENSMUSG00002075685.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACATTTTCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	3591971	3597538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3593180_3594771
ES.4128.20	chr11	+	5373	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-286	-2	17	2	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599207	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.21	chr11	+	4451	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	111.696617674843	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599208	3640475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.22	chr11	+	5612	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	18	-1	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGCCCTGCATTTTT	NA	False	NA	23	True	CATAAA	-16	NA	3599208	3640369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.23	chr11	+	4461	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	18	1177	18	-1070	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGAGACCGTACTTTT	NA	False	NA	NA	False	CATAAA	-34	NA	3599208	3639300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.24	chr11	+	5754	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	19	0	intron_retention	FALSE	canonical	2	20	junction_1	117.313921650492	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599209	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.25	chr11	+	3392	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	19	-1067	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.838451416354	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCGTACTTTTTTT	NA	False	NA	NA	False	CATAAA	-37	NA	3599209	3639303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.26	chr11	+	5640	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	19	2	intron_retention	FALSE	canonical	0	0	junction_6	124.54283856992	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599209	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3623743_3623852_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.27	chr11	+	4427	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	22	-1067	intron_retention	FALSE	canonical	2	25	junction_13	109.076164215653	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCGTACTTTTTTT	NA	False	NA	NA	False	CATAAA	-37	NA	3599212	3639303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.29	chr11	+	5713	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	25	0	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599215	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.3	chr11	+	2527	2	Antisense	novelGene_ENSMUSG00002075685.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	3593921	3597482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3595528_3596561
ES.4128.30	chr11	+	6055	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-278	-692	25	585	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCTCTCAGCATCTTC	NA	False	NA	NA	False	TATAAA	-25	NA	3599215	3641062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.31	chr11	+	5480	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	27	-6	intron_retention	FALSE	canonical	2	25	junction_13	93.8943746983812	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599217	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.33	chr11	+	4173	24	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	130.469589558724	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGCCCTGCATTTTT	NA	False	NA	23	True	CATAAA	-16	NA	3599217	3640369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3608671_3608726_3611828_3611864_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.35	chr11	+	5521	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	30	105	30	2	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599220	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.36	chr11	+	4555	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.838451416354	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599220	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.37	chr11	+	5413	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	135.602648950405	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599223	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618716_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629653_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.39	chr11	+	5584	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	34	-5	intron_retention	FALSE	canonical	2	25	junction_13	109.076164215653	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599224	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.4	chr11	+	3509	1	Antisense	novelGene_ENSMUSG00002076847.1_AS_novelGene_ENSMUSG00002075685.1_AS_novelGene_ENSMUSG00000056579.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACTGTTCCTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	3595522	3599031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3595500_3599000
ES.4128.41	chr11	+	5500	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	132.792793200256	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGGCCCTGCATTTT	NA	False	NA	22	True	CATAAA	-15	NA	3599224	3640368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3614150_3614299_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.43	chr11	+	5471	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	127.447022265038	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGCCCTGCATTTTTAT	NA	False	NA	25	True	CATAAA	-18	NA	3599225	3640371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.45	chr11	+	5213	26	NIC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	97.4229049043396	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCCCTGCATTTTTA	NA	False	NA	24	True	CATAAA	-17	NA	3599225	3640370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600147_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.46	chr11	+	6198	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	35	574	intron_retention	FALSE	canonical	2	109	junction_20	77.0319414269172	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCTATCATTCTGCTC	NA	False	NA	NA	False	TATAAA	-14	NA	3599225	3641051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.47	chr11	+	5969	25	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	-1	intron_retention	FALSE	canonical	2	109	junction_19	99.0851117726573	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599226	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.48	chr11	+	5569	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-1	intron_retention	FALSE	canonical	0	0	junction_22	97.9810920535182	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599226	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635707_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.49	chr11	+	5547	26	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	-1	intron_retention	FALSE	canonical	0	0	junction_21	125.106572169491	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599226	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634897_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.5	chr11	+	6915	25	ISM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	-629	105	-629	2	intron_retention	FALSE	canonical	2	298	junction_20	48.8010238679021	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3598561	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110
ES.4128.50	chr11	+	5627	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	-6	intron_retention	FALSE	canonical	2	20	junction_1	128.68493357879	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599226	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.51	chr11	+	6109	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-3	intron_retention	FALSE	canonical	3	298	junction_20	44.5937682492371	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	False	NA	72	True	TATAAA	-13	NA	3599226	3640474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.52	chr11	+	5656	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	2	intron_retention	FALSE	canonical	0	0	junction_1	134.379359018331	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599226	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607849_3607988_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.53	chr11	+	5433	26	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	2	intron_retention	FALSE	canonical	2	6	junction_19	113.531148148867	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599226	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634074_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.54	chr11	+	5657	25	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-5	intron_retention	FALSE	canonical	0	0	junction_21	112.776996952688	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599226	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634897_3635480_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.55	chr11	+	5608	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-3	intron_retention	FALSE	canonical	0	0	junction_4	97.4678285384465	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	False	NA	72	True	TATAAA	-13	NA	3599226	3640474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618844_3619341_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.56	chr11	+	5254	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.0666758715932	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599226	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600399_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.57	chr11	+	5494	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	2	intron_retention	FALSE	canonical	0	0	junction_18	98.1366068294599	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599226	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633596_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.6	chr11	+	5564	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	-340	-139	-37	32	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTTTTCTCTTCATTC	NA	False	NA	107	True	NA	NA	NA	3599153	3640509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.60	chr11	+	4544	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	36	-1086	intron_retention	FALSE	canonical	2	20	junction_1	117.313921650492	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGTTAATGCCTGCT	NA	False	NA	NA	False	CATAAA	-18	NA	3599226	3639284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.61	chr11	+	5818	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	36	-1	intron_retention	FALSE	canonical	2	20	junction_1	119.614353653732	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599226	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.62	chr11	+	5291	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.356788904931	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599227	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600359_3600448_3608671_3608726_3611828_3611864_3618772_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.63	chr11	+	5678	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	37	-2	intron_retention	FALSE	canonical	1	2	junction_1	123.649389798871	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599227	3640475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607183_3607245_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.64	chr11	+	5199	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	37	2	intron_retention	FALSE	canonical	0	0	junction_19	160.352082618219	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599227	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633988_3634077_3634613_3634746_3634837_3634893_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.65	chr11	+	5431	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	37	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.947802284257	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599227	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3603597_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.66	chr11	+	5659	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	37	-2	intron_retention	FALSE	canonical	0	0	junction_2	140.53815829482	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTGGCCCTGCATTTT	NA	False	NA	22	True	CATAAA	-15	NA	3599227	3640368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3606169_3606202_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.67	chr11	+	5562	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	38	-3	intron_retention	FALSE	canonical	0	0	junction_3	98.0511376782544	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATTTGGCCCTGCATTT	NA	False	NA	21	True	CATAAA	-14	NA	3599228	3640367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618716_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.69	chr11	+	9541	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	41	-3926	41	3926	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAATAAGGTTATTC	NA	False	NA	NA	False	NA	NA	NA	3599231	3644403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.7	chr11	+	5722	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	-31	-35	-31	35	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCTCTTCATTCTGT	NA	False	NA	110	True	NA	NA	NA	3599159	3640512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.72	chr11	+	5667	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	42	-1	intron_retention	FALSE	canonical	0	0	junction_3	98.0511376782544	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599232	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618716_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.77	chr11	+	5616	25	NIC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	42	-2	intron_retention	FALSE	canonical	2	110	junction_1	82.080657739811	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599232	3640475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.79	chr11	+	5805	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	43	-2	intron_retention	FALSE	canonical	1	1	junction_1	134.267748928649	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGCGTTCAGTACAT	NA	False	NA	73	True	TATAAA	-14	NA	3599233	3640475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607796_3607988_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.83	chr11	+	5361	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	111.915998983177	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599234	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631659_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.84	chr11	+	4697	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.843960118194	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	False	NA	72	True	TATAAA	-13	NA	3599235	3640474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3600012_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.85	chr11	+	6244	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	45	572	intron_retention	FALSE	canonical	1	2	junction_1	123.649389798871	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCCTATCATTCTGC	NA	False	NA	NA	False	TATAAA	-12	NA	3599235	3641049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3607183_3607245_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.86	chr11	+	5649	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	45	-6	intron_retention	FALSE	canonical	1	1	junction_3	134.306067705392	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	False	NA	18	True	CATAAA	-11	NA	3599235	3640364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3614150_3614299_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.88	chr11	+	5312	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_14	120.938734550982	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599235	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629761_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.89	chr11	+	9883	23	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	45	-1	intron_retention	FALSE	canonical	2	109	junction_18	79.4170392025696	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGCGTTCAGTACATT	NA	False	NA	74	True	TATAAA	-15	NA	3599235	3640476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110
ES.4128.9	chr11	+	4370	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	96.7450257119197	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCCTGCATTTTTATT	NA	False	NA	26	True	CATAAA	-19	NA	3599183	3640372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599260_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.92	chr11	+	9262	22	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	48	0	intron_retention	FALSE	canonical	2	109	junction_16	83.8476915254657	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCCCTGCATTTTTA	NA	False	NA	24	True	CATAAA	-17	NA	3599238	3640370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.93	chr11	+	5349	26	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	48	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	145.504606112659	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTCCTGCGTTCAGTAC	NA	False	NA	71	True	TATAAA	-12	NA	3599238	3640473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625985_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3638110_3638300_3639034
ES.4128.94	chr11	+	6088	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	49	513	intron_retention	FALSE	canonical	0	0	junction_21	154.831648916405	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCTGTGGTATGTGT	NA	False	NA	NA	False	AATATA	-23	NA	3599239	3640990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634821_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034_3639173_3639340
ES.4128.96	chr11	+	5558	28	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	127.447022265038	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTCCTGCGTTCAGTA	NA	False	NA	70	True	TATAAA	-11	NA	3599239	3640472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3600147_3600307_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4128.98	chr11	+	3668	13	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	49	-17	intron_retention	FALSE	canonical	3	353	junction_1	35.970956648694	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	3599239	3631134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3630035_3630174
ES.4128.99	chr11	+	4629	28	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.644898088602	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599239	3640477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3599305_3600399_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ES.4129.1	chr11	-	5208	3	FSM	ENSMUSG00000056579.19	ENSMUST00000153313.9	5112	3	384	-480	-14	471	multi-exon	FALSE	canonical	3	2126	junction_1	263	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTTTGACACTGGCAA	NA	False	NA	NA	False	AATAAA	-16	NA	3597146	3589313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3593180_3594771_3595524_3596556
ES.4129.2	chr11	-	8281	2	FSM	ENSMUSG00000056579.19	ENSMUST00000132077.4	6719	2	-1570	8	-64	1	multi-exon	FALSE	canonical	3	2652	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTGGGTTTCTATTA	NA	False	NA	NA	False	NA	NA	NA	3599106	3589792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3595524_3596556
ES.4129.3	chr11	-	6600	3	FSM	ENSMUSG00000056579.19	ENSMUST00000153313.9	5112	3	-1487	-1	25	1	multi-exon	FALSE	canonical	3	2126	junction_1	263	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTGGGTTTCTATTA	NA	False	NA	NA	False	NA	NA	NA	3599017	3589792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3593180_3594771_3595524_3596556
ES.4129.4	chr11	-	6968	1	FSM	ENSMUSG00002076556.1	ENSMUST00020182120.1	236	1	-1241	-5491	-1241	5491	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGAGTTGGGTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	3596762	3589794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3589800_3596800
ES.4129.6	chr11	-	1649	2	FSM	ENSMUSG00000056579.19	ENSMUST00000132077.4	6719	2	956	4114	552	1036	multi-exon	FALSE	canonical	3	2652	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACCCTTTCTCATAC	NA	False	NA	-16	True	AATAAA	-12	NA	3596580	3593898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3595524_3596556
ES.4129.7	chr11	-	1492	1	FSM	ENSMUSG00000056579.19	ENSMUST00000193809.2	1612	1	609	-489	-22	489	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCAGGCGTTGGATTCCT	NA	False	NA	NA	False	NA	NA	NA	3599064	3597572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3597600_3599100
ES.413.1	chr1	-	177	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGTTTAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	45889136	45888959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_45889000_45889100
ES.4130.1	chr11	-	2560	18	Intergenic	novelGene_3170	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3633939	3603215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3603713_3608671_3608724_3611826_3611863_3618769_3618840_3619328_3619420_3622265_3622373_3625825_3625987_3626102_3626216_3626641_3626765_3627399_3627482_3628225_3628309_3628534_3628621_3629654_3629791_3629875_3630034_3630173_3630303_3630781_3630887_3631672_3631808_3633543
ES.4130.3	chr11	-	3946	21	Antisense	novelGene_ENSMUSG00000034543.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAACCAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	3635811	3607414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3608724_3611826_3611863_3618769_3618840_3619328_3619420_3622264_3622373_3625825_3625987_3626102_3626216_3626641_3626765_3627399_3627482_3628225_3628309_3628534_3628621_3629654_3629797_3629879_3630034_3630173_3630303_3630781_3630887_3631672_3631805_3633541_3634077_3634612_3634748_3634836_3634891_3635382_3635526_3635656
ES.4130.4	chr11	-	2272	1	Antisense	novelGene_ENSMUSG00000034543.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACCAAAAAGGTGGGAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	3635588	3633316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3633300_3635600
ES.4131.1	chr11	+	177	1	Intergenic	novelGene_3171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3776950	3777127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3777000_3777100
ES.4132.1	chr11	+	5386	1	Intergenic	novelGene_3172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	3795195	3800581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3795200_3800600
ES.4133.1	chr11	-	4096	14	FSM	ENSMUSG00000020435.18	ENSMUST00000070552.14	4097	14	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0.605692913385524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTTGCAGAGTCTCTG	NA	False	NA	-2	True	AATAAA	-25	NA	3813902	3653730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667793_3667987_3676318_3676576_3769836_3770046_3813232
ES.4133.2	chr11	-	2728	2	ISM	ENSMUSG00000020435.18	ENSMUST00000135250.2	3054	3	26	93561	26	-93561	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	3813877	3767962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_3770046_3813232
ES.4134.1	chr11	+	277	1	Intergenic	novelGene_3173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAGGGAAAGGA	1644	False	NA	NA	False	NA	NA	NA	3841638	3841915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_3841600_3841900
ES.4135.1	chr11	+	4482	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	-287	437	-287	-437	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGACCTATGACTTTC	4958	False	NA	NA	False	AATAAA	-19	NA	3844952	3850859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3845518_3846942
ES.4135.2	chr11	+	4149	2	NNC	ENSMUSG00000047205.13	novel	4632	2	NA	NA	-250	-442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCCTGTGACCTATGA	4995	False	NA	NA	False	AATAAA	-14	NA	3844989	3850854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3845227_3846942
ES.4135.3	chr11	+	3645	3	NNC	ENSMUSG00000047205.13	novel	4632	2	NA	NA	-13	-439	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGTGACCTATGACTT	5232	False	NA	NA	False	AATAAA	-17	NA	3845226	3850857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3845518_3846942_3847771_3848331
ES.4135.4	chr11	+	4642	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	-7	-3	-7	3	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCATCCTCAAATTCT	5238	False	NA	NA	False	AATAAA	-20	NA	3845232	3851299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3845518_3846942
ES.4135.5	chr11	+	3151	4	NNC	ENSMUSG00000047205.13	novel	4632	2	NA	NA	13	-440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTGTGACCTATGACT	5258	False	NA	NA	False	AATAAA	-16	NA	3845252	3850856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3845518_3846942_3847177_3847643_3847771_3848331
ES.4136.1	chr11	+	1263	1	Antisense	novelGene_ENSMUSG00000048807.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAAATTTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	3863925	3865188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_3863900_3865200
ES.4137.1	chr11	-	3099	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	-37	-3	-37	2	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCATTCCTTGGGGC	NA	False	NA	NA	False	AATAAA	-19	NA	3864701	3857018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3857985_3862568
ES.4138.1	chr11	-	1952	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	86	-11	5	11	multi-exon	FALSE	canonical	3	40	junction_9	35.4989132158461	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGGTGCCTCGTGTTC	NA	False	NA	0	True	ATTAAA	-28	NA	3882073	3867180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
ES.4138.12	chr11	-	1734	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	25	190	-24	-190	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTTGTGAGTACCA	NA	False	NA	NA	False	CATAAA	-14	NA	3882019	3867381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
ES.4138.3	chr11	-	1897	10	NNC	ENSMUSG00000020432.13	novel	1949	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	43.1225643434566	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTAGAGTCCTGGTGCCTC	NA	False	NA	-6	True	ATTAAA	-22	NA	3882044	3867186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881531_3881975
ES.4138.4	chr11	-	1983	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	-29	-5	5	5	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTAGAGTCCTGGTGCCTC	NA	False	NA	-6	True	ATTAAA	-22	NA	3882073	3867186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
ES.4138.6	chr11	-	1858	10	NNC	ENSMUSG00000020432.13	novel	1943	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	47.4250545858319	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGACGTAGAGTCCTGG	NA	False	NA	-12	True	ATTAAA	-16	NA	3882052	3867192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881527_3882012
ES.4138.9	chr11	-	1933	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	10	2	10	-2	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGACGTAGAGTCCTG	NA	False	NA	-13	True	ATTAAA	-15	NA	3881779	3867193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881724
ES.4139.1	chr11	-	227	1	Intergenic	novelGene_3174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTCCTTTATTAATG	1894	False	NA	NA	False	NA	NA	NA	3893259	3893032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3893000_3893300
ES.414.1	chr1	-	138	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAAT	NA	False	NA	NA	False	AATAAA	-20	NA	45896485	45896347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_45896300_45896500
ES.4140.1	chr11	+	2490	15	NNC	ENSMUSG00000020430.13	novel	2923	15	NA	NA	-5436	-779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	294.498995182098	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTCAGAAGCCTC	NA	False	NA	29	True	NA	NA	NA	3908538	3929225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3908983_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.10	chr11	+	4649	13	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-9	-786	intron_retention	FALSE	canonical	3	864	junction_11	102.345106543173	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGATTCTGTGTTCAG	NA	False	NA	22	True	NA	NA	NA	3913999	3929218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3928033_3928826
ES.4140.11	chr11	+	2461	14	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-9	-785	intron_retention	FALSE	canonical	0	0	junction_11	308.116015958179	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3913999	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927080_3927784_3927870_3928033_3928826
ES.4140.13	chr11	+	2885	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	25	1	-9	-1	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGCTGCCCATTATT	NA	False	NA	NA	False	NA	NA	NA	3913999	3930003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.17	chr11	+	2187	14	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-8	-785	intron_retention	FALSE	canonical	3	864	junction_12	99.9495730844475	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3914000	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3928033_3928826
ES.4140.18	chr11	+	2040	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-8	-785	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	296.881590152418	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3914000	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927685_3927784_3927870_3928033_3928826
ES.4140.2	chr11	+	4620	14	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-32	-785	intron_retention	FALSE	canonical	3	864	junction_11	99.2555723325056	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3913942	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.21	chr11	+	2568	13	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-5	-785	intron_retention	FALSE	canonical	3	864	junction_10	103.085286966128	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3914003	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.24	chr11	+	2234	16	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-4	-785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	383.510764733751	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3914004	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920379_3920518_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.27	chr11	+	4073	14	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	8	-786	intron_retention	FALSE	canonical	3	864	junction_11	99.7237604704459	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGATTCTGTGTTCAG	NA	False	NA	22	True	NA	NA	NA	3914016	3929218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.28	chr11	+	1715	13	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	-14	-785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	312.474665639739	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3914034	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914061_3918262_3918343_3923283_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.29	chr11	+	1801	12	ISM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	6648	792	6574	-792	3prime_fragment	FALSE	canonical	3	864	junction_9	82.6520137195751	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCCAATTGGATTCTGT	NA	False	NA	16	True	NA	NA	NA	3920622	3929212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.3	chr11	+	2159	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	-28	780	-28	-780	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTGTTCAGAAGCCT	NA	False	NA	28	True	NA	NA	NA	3913946	3929224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.30	chr11	+	1782	10	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	8831	-789	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	437.826562425616	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTGGATTCTGTGTT	NA	False	NA	19	True	NA	NA	NA	3922879	3929215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927080_3927201_3927625_3927784_3928826
ES.4140.32	chr11	+	1156	6	ISM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	12312	785	12238	-785	3prime_fragment	FALSE	canonical	3	864	junction_3	97.9926527858084	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	1246	False	NA	23	True	NA	NA	NA	3926286	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.4	chr11	+	3404	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	-9	-484	-9	484	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGGCTCCTGTAAAATA	NA	False	NA	NA	False	NA	NA	NA	3913965	3930488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.6	chr11	+	1674	12	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	1	-791	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	314.799004482448	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAATTGGATTCTGTG	NA	False	NA	17	True	NA	NA	NA	3913975	3929213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914029_3923265_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ES.4140.7	chr11	+	1961	14	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	3	-785	combination_of_known_splicesites	FALSE	canonical	1	13	junction_13	308.048793491547	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGATTCTGTGTTCAGA	NA	False	NA	23	True	NA	NA	NA	3913977	3929219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3928826
ES.4140.8	chr11	+	1943	15	NNC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	3	-791	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	297.882090424917	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAATTGGATTCTGTG	NA	False	NA	17	True	NA	NA	NA	3913977	3929213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927137_3927735_3927784_3927870_3928033_3928826
ES.4141.1	chr11	-	3847	2	Antisense	novelGene_ENSMUSG00000020430.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTCTGGACTATGGGA	8235	False	NA	NA	False	NA	NA	NA	3923805	3918920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_3919585_3920622
ES.4142.1	chr11	+	1896	4	FSM	ENSMUSG00000049721.15	ENSMUST00000063004.14	1879	4	-8	-9	-8	-2	multi-exon	FALSE	canonical	0	0	junction_1	5.18544972870135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTTTTTTTTGT	8664	False	NA	NA	False	AGTAAA	-14	NA	3933704	3949324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3933841_3934940_3935159_3946908_3947052_3947925
ES.4142.2	chr11	+	1943	4	NNC	ENSMUSG00000049721.15	novel	1879	4	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.18544972870135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTTTATGTGTGTG	8716	False	NA	NA	False	NA	NA	NA	3933756	3949308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3933841_3934825_3935159_3946908_3947052_3947925
ES.4142.3	chr11	+	1589	3	NNC	ENSMUSG00000049721.15	novel	1749	3	NA	NA	2570	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTTTTTTTTTGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	3942502	3949325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3942549_3946908_3947052_3947925
ES.4143.1	chr11	+	4504	12	NNC	ENSMUSG00000019368.14	novel	675	6	NA	NA	-4242	4626	intron_retention	FALSE	non_canonical	0	0	junction_1	6.4166621945532	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACAAAATGGCTGTAAG	9486	False	NA	NA	False	AATAAA	-16	NA	3977219	4002650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3977277_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993973_3994063_3994234_3996212_3998942_4002032
ES.4143.10	chr11	+	3364	12	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	12	293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.32730375417586	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGATCCTTGCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	3981794	3998317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981900_3985122_3985199_3989435_3989480_3989643_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.12	chr11	+	3214	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	33	-291	-26	291	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATCCTGATCCTTGCCCT	NA	False	NA	NA	False	ATTAAA	-14	NA	3981815	3998315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.13	chr11	+	1344	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	41	1571	-18	117	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTGTCTCCATCTTAG	NA	False	NA	NA	False	NA	NA	NA	3981823	3996453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.14	chr11	+	4233	11	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	-15	1241	intron_retention	FALSE	canonical	0	0	junction_1	5.40462764674866	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	3981826	3999265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981907_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993973_3994063_3994234_3996212
ES.4143.15	chr11	+	4032	13	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	-15	4209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	5.18009008930668	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTTTTCATTTTTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	3981826	4002233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212_3998944_4002032
ES.4143.16	chr11	+	4161	12	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	-13	1244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.26174404672283	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	3981828	3999268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981907_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.17	chr11	+	1847	2	NNC	ENSMUSG00000019368.14	novel	3238	11	NA	NA	5983	4632	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCTGTAAGAGTGTG	5213	False	NA	NA	False	AATAAA	-22	NA	3997719	4002656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3998948_4002037
ES.4143.2	chr11	+	5025	10	NNC	ENSMUSG00000019368.14	novel	746	9	NA	NA	24	4632	intron_retention	FALSE	non_canonical	0	0	junction_1	6.5054582970242	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCTGTAAGAGTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	3981488	4002656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981662_3985122_3985199_3989435_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993973_3994063_3994234_3996212_3998944_4002032
ES.4143.3	chr11	+	4149	12	NIC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	-12	293	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	5.26174404672283	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGATCCTTGCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	3981770	3998317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3992398_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.4	chr11	+	4515	13	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	-12	4636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	5.18009008930668	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTAAGAGTGTGGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	3981770	4002660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212_3998944_4002032
ES.4143.5	chr11	+	2975	12	NNC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.26174404672283	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTTTTTCTGGATCCA	NA	False	NA	NA	False	NA	NA	NA	3981782	3998036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_3981907_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4143.8	chr11	+	3035	11	NIC	ENSMUSG00000019368.14	novel	2956	12	NA	NA	6	12	intron_retention	FALSE	canonical	3	10	junction_7	3.23882694814033	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTTTTTTCTGGATCCA	NA	False	NA	NA	False	NA	NA	NA	3981788	3998036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993973_3994063_3994234_3996212
ES.4143.9	chr11	+	4185	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	8	-1237	8	1237	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	3981790	3999261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ES.4144.1	chr11	-	228	1	Intergenic	novelGene_3175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGATCCCCTGGGATTTT	NA	False	NA	NA	False	NA	NA	NA	3987304	3987076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_3987100_3987300
ES.4145.1	chr11	+	177	1	Intergenic	novelGene_3176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAATTCTGTATTTTT	7717	False	NA	NA	False	NA	NA	NA	4042801	4042978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4042800_4043000
ES.4146.2	chr11	-	2764	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	-1354	1	-1354	-1	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTTCATTTCCTCT	NA	False	NA	0	True	AATAAA	-16	NA	4046799	4041480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ES.4146.3	chr11	-	1323	4	NNC	ENSMUSG00000004748.6	novel	1411	4	NA	NA	73	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	72.5962962018189	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCTTTTCATTTCCTC	NA	False	NA	-1	True	AATAAA	-15	NA	4045372	4041481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4042300_4043800_4044034_4044388_4044517_4045228
ES.4146.4	chr11	-	2433	2	ISM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	22	10	22	-10	intron_retention	FALSE	canonical	3	165	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGCATCTCCTTTTC	NA	False	NA	-9	True	AATAAA	-7	NA	4045423	4041489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4042300_4043800
ES.4146.5	chr11	-	906	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	22	483	22	-483	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGTTTTACTTGCATG	NA	False	NA	-2	True	TTTAAA	-19	NA	4045423	4041962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ES.4146.6	chr11	-	1895	2	ISM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	81	489	81	-489	intron_retention	FALSE	canonical	3	165	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTATAAGTGTTTTACT	NA	False	NA	-8	True	TTTAAA	-13	NA	4045364	4041968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4042300_4043800
ES.4147.1	chr11	+	216	1	Intergenic	novelGene_3177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTTTCATTTCAGAA	1677	False	NA	NA	False	NA	NA	NA	4050304	4050520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4050300_4050500
ES.4148.1	chr11	+	215	1	Intergenic	novelGene_3178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAACACAGGAGATAGACC	NA	False	NA	NA	False	NA	NA	NA	4063851	4064066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4063900_4064100
ES.4149.1	chr11	-	2602	11	NIC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	5.85149553533112	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4073419	4047038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4073165
ES.4149.2	chr11	-	2916	13	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	10.820184327861	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4073431	4047038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624_4068851_4073165
ES.4149.3	chr11	-	7215	12	FSM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	-4584	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	8.90816321700644	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4073415	4047038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624
ES.4149.4	chr11	-	2788	13	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-1447	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	11.1688430714893	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4070278	4047038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624_4068851_4070140
ES.4149.5	chr11	-	7415	11	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.3677384226262	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCAGAATTCATTGCC	NA	False	NA	-3	True	AATAAA	-19	NA	4073419	4047041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4050803_4050938_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4073165
ES.4149.6	chr11	-	3083	13	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.1688430714893	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAGCAGAATTCATTG	NA	False	NA	-5	True	AATAAA	-17	NA	4073415	4047043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624_4069039_4073165
ES.4149.7	chr11	-	3115	13	NNC	ENSMUSG00000003585.14	novel	2631	12	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	11.1688430714893	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAAGAGCAGAATTCA	NA	False	NA	-8	True	AATAAA	-14	NA	4073419	4047046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624_4068851_4072946
ES.415.1	chr1	-	3275	8	FSM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	0	95	0	-95	multi-exon	FALSE	canonical	0	0	junction_6	1.82946406783796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGCCTTTACTGAGTT	NA	False	NA	NA	False	TATAAA	-16	NA	45964742	45947322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_45948880_45950051_45950691_45951395_45951642_45957468_45957596_45958044_45958161_45960315_45960476_45963876_45963945_45964380
ES.415.2	chr1	-	2389	8	FSM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	0	981	0	-981	multi-exon	FALSE	canonical	0	0	junction_6	1.82946406783796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCACTCTTGTAAAAC	NA	False	NA	NA	False	GATAAA	-13	NA	45964742	45948208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_45948880_45950051_45950691_45951395_45951642_45957468_45957596_45958044_45958161_45960315_45960476_45963876_45963945_45964380
ES.4150.1	chr11	+	4888	1	Intergenic	novelGene_3179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGCCTTTTTCCTTTT	3534	False	NA	NA	False	NA	NA	NA	4073481	4078369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4073500_4078400
ES.4151.1	chr11	+	1900	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	-24	-2	-24	2	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGTTAAGACATAAAT	7826	False	NA	NA	False	AATAAA	-21	NA	4085177	4091174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
ES.4151.2	chr11	+	2175	7	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-4	2	intron_retention	FALSE	canonical	3	22	junction_1	5.78551831923659	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTGTTAAGACATAAAT	7846	False	NA	NA	False	AATAAA	-21	NA	4085197	4091174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4090401_4090486
ES.4151.3	chr11	+	3444	4	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-4	5	intron_retention	FALSE	canonical	3	28	junction_2	4.49691252107735	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	7846	False	NA	NA	False	AATAAA	-24	NA	4085197	4091177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4086632_4086711_4087369_4089738_4090401_4090486
ES.4151.4	chr11	+	4958	5	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-4	1	intron_retention	FALSE	canonical	3	22	junction_1	6.37867541108654	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCTGTTAAGACATAAA	7846	False	NA	NA	False	AATAAA	-20	NA	4085197	4091173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4090401_4090486
ES.4151.5	chr11	+	3142	6	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	21	junction_3	6.55438784326958	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCTGTTAAGACATAA	7848	False	NA	NA	False	AATAAA	-19	NA	4085199	4091172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4086632_4086711_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
ES.4151.6	chr11	+	5029	4	FSM	ENSMUSG00000093080.3_ENSMUSG00000003581.15	ENSMUST00000127165.2	722	4	-294	-4013	6	-4	multi-exon	FALSE	canonical	3	22	junction_1	4.89897948556636	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATAAATCTGTTAAGAC	7856	False	NA	NA	False	AATAAA	-15	NA	4085207	4091168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711
ES.4151.7	chr11	+	4950	2	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	946	-5	646	5	intron_retention	FALSE	canonical	3	34	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	8796	False	NA	NA	False	AATAAA	-24	NA	4086147	4091177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4086632_4086711
ES.4151.8	chr11	+	1446	2	NIC	ENSMUSG00000003581.15	novel	1874	9	NA	NA	4006	0	intron_retention	FALSE	canonical	3	37	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCTGTTAAGACATAA	NA	False	NA	NA	False	AATAAA	-19	NA	4089507	4091172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4090079_4090297
ES.4152.1	chr11	-	5164	13	NNC	ENSMUSG00000051427.15	novel	5153	13	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	3.19178633370093	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGTTTTTGTTT	8521	False	NA	-2	True	ATTAAA	-18	NA	4110263	4091120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101976_4102908_4103057_4108159_4108290_4110158
ES.4152.2	chr11	-	6081	9	NNC	ENSMUSG00000051427.15	novel	5153	13	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_7	2.69258240356725	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTGTTTTTGTTT	8492	False	NA	-2	True	ATTAAA	-18	NA	4110292	4091120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096719_4097168_4099085_4099930_4100103_4101671_4101854_4102908_4103057_4110158
ES.4152.3	chr11	-	4587	10	NIC	ENSMUSG00000051427.15	novel	5015	12	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	2.42415824769683	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGTTTTTGT	8514	False	NA	-4	True	ATTAAA	-16	NA	4110270	4091122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4110158
ES.4152.4	chr11	-	4994	12	FSM	ENSMUSG00000051427.15	ENSMUST00000093381.11	5015	12	21	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_10	2.2672661660618	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGTTTTTGT	8514	False	NA	-4	True	ATTAAA	-16	NA	4110270	4091122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
ES.4152.5	chr11	-	5030	13	NIC	ENSMUSG00000051427.15	novel	5153	13	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	3.06412938514171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGTTTTTGT	8608	False	NA	-4	True	ATTAAA	-16	NA	4110176	4091122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4108159_4108290_4110158
ES.4152.6	chr11	-	4954	12	NNC	ENSMUSG00000051427.15	novel	5153	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.8948515141983	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGTTTTTGT	8492	False	NA	-4	True	ATTAAA	-16	NA	4110292	4091122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4093936_4094025_4094115_4094509_4094588_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
ES.4153.1	chr11	+	3065	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	-28	1883	-28	1239	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCTTAGAAAGCTCTG	NA	False	NA	38	True	NA	NA	NA	4110321	4130658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.10	chr11	+	5968	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	6	-1054	1	1054	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTTTACTGATGAGG	NA	False	NA	NA	False	AATAAA	-23	NA	4110355	4133595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.17	chr11	+	2683	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	7	1105	combination_of_known_splicesites	FALSE	canonical	1	12	junction_11	231.265153943631	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCTGTGTGAGATACT	NA	False	NA	-24	True	NA	NA	NA	4110361	4130524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.19	chr11	+	3708	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	10	1109	intron_retention	FALSE	canonical	3	694	junction_10	83.0427723574805	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110364	4130528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.2	chr11	+	4974	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	1	-55	1	55	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTGTCTGTGTGG	NA	False	NA	101	True	NA	NA	NA	4110350	4132596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.20	chr11	+	2754	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	19	2147	14	975	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATCATGCTTTGGT	NA	False	NA	NA	False	AATAGA	-22	NA	4110368	4130394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.21	chr11	+	2845	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	15	1201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.064828460039	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTCATGGAAGCAGT	NA	False	NA	0	True	ATTAAA	-15	NA	4110369	4130620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110417_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.22	chr11	+	3016	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	17	1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	221.985184690831	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGATACTGTGTTTT	NA	False	NA	-17	True	NA	NA	NA	4110371	4130531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129554_4130033
ES.4153.23	chr11	+	2961	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	21	1204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	225.619108725795	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCATGGAAGCAGTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	4110375	4130623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129228_4129353_4129426_4130033
ES.4153.24	chr11	+	6331	13	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	21	-17	intron_retention	FALSE	canonical	3	694	junction_10	89.9160101922282	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTTGGTCATACGC	NA	False	NA	29	True	ATTAAA	-33	NA	4110375	4132524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126727_4127412_4129243_4129353_4129426_4130033
ES.4153.25	chr11	+	3426	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	21	1204	intron_retention	FALSE	canonical	3	694	junction_11	84.6770575872394	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCATGGAAGCAGTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	4110375	4130623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.29	chr11	+	6595	14	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	22	1203	intron_retention	FALSE	canonical	3	694	junction_10	87.6793512695735	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCATGGAAGCAGTTT	NA	False	NA	2	True	ATTAAA	-17	NA	4110376	4130622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.3	chr11	+	4375	13	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	0	1202	intron_retention	FALSE	canonical	3	694	junction_9	86.7749323761701	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTTCATGGAAGCAGTT	NA	False	NA	1	True	ATTAAA	-16	NA	4110354	4130621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.32	chr11	+	4846	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	28	46	23	-46	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATCATTTTTATATGT	NA	False	NA	0	True	ATTAAA	-4	NA	4110377	4132495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.33	chr11	+	6392	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	24	1051	intron_retention	FALSE	canonical	3	694	junction_11	84.6770575872394	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTCATTTTACTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	4110378	4133592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.34	chr11	+	4946	17	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	26	-31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	289.129620585647	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATTATGTATAAATTA	NA	False	NA	15	True	ATTAAA	-19	NA	4110380	4132510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4121267_4121356_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.35	chr11	+	2504	14	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	27	1204	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	240.308578743564	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCATGGAAGCAGTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	4110381	4130623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.36	chr11	+	4837	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	27	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.064828460039	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTATGTATAAATTAC	NA	False	NA	16	True	ATTAAA	-20	NA	4110381	4132511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110530_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.37	chr11	+	4014	14	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	27	1109	intron_retention	FALSE	canonical	3	694	junction_10	87.0266231454184	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110381	4130528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.38	chr11	+	4944	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	27	-33	intron_retention	FALSE	canonical	3	694	junction_10	84.4290548692951	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATTATGTATAAAT	NA	False	NA	13	True	ATTAAA	-17	NA	4110381	4132508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.39	chr11	+	2606	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	43	2271	38	851	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGGATTGGAGGTCCT	NA	False	NA	NA	False	AATGAA	-12	NA	4110392	4130270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.4	chr11	+	3989	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	926	0	-926	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTGTCCTGATGTGGG	NA	False	NA	NA	False	AGTAAA	-31	NA	4110354	4131615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.40	chr11	+	2889	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	40	1203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	227.893210858848	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCATGGAAGCAGTTT	NA	False	NA	2	True	ATTAAA	-17	NA	4110394	4130622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127554_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.41	chr11	+	3400	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	40	1109	intron_retention	FALSE	canonical	1	1	junction_5	297.226169028832	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTGAGATACTGTGT	NA	False	NA	-20	True	NA	NA	NA	4110394	4130528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4121267_4121356_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.42	chr11	+	3718	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	40	-1046	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	225.469426358037	870	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGAGTCCTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	4110394	4131495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116606_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.44	chr11	+	4618	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	59	-30	combination_of_known_splicesites	FALSE	canonical	1	12	junction_11	231.265153943631	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTATGTATAAATTAC	NA	False	NA	16	True	ATTAAA	-20	NA	4110413	4132511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.45	chr11	+	2805	15	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	692	1918	687	1204	3prime_fragment	FALSE	canonical	3	694	junction_10	82.4576576560507	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCATGGAAGCAGTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	4111041	4130623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.46	chr11	+	4644	15	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	718	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	233.999007934405	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTATTATGTATAAATT	NA	False	NA	14	True	ATTAAA	-18	NA	4111072	4132509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124211_4125042_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.47	chr11	+	7944	10	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	6248	1111	intron_retention	FALSE	canonical	3	694	junction_7	94.3061732920367	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGAGATACTGTGTTT	NA	False	NA	-18	True	NA	NA	NA	4116602	4130530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4129243_4129353_4129426_4130033
ES.4153.49	chr11	+	2427	1	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	-8035	26	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCCCCACCCCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	4119512	4121939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4119500_4121900
ES.4153.5	chr11	+	3869	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	1046	0	-1046	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGAGTCCTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	4110354	4131495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.50	chr11	+	4101	12	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	10710	32	-6488	-32	3prime_fragment	FALSE	canonical	3	694	junction_7	88.4363711124399	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTATTATGTATAAATT	NA	False	NA	14	True	ATTAAA	-18	NA	4121059	4132509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.7	chr11	+	5426	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	0	-27	intron_retention	FALSE	canonical	1	1	junction_5	297.226169028832	871	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGTATAAATTACTTT	NA	False	NA	19	True	ATTAAA	-23	NA	4110354	4132514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4121267_4121356_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.8	chr11	+	2913	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	6	2001	1	1121	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTTTTGGTTTTTTG	NA	False	NA	-8	True	NA	NA	NA	4110355	4130540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4153.9	chr11	+	2987	16	NNC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	1	1204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	226.689763529121	867	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCATGGAAGCAGTTTG	NA	False	NA	3	True	ATTAAA	-18	NA	4110355	4130623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126718_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ES.4154.1	chr11	-	6290	1	Antisense	novelGene_ENSMUSG00000002129.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	789	False	NA	NA	False	NA	NA	NA	4122630	4116340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4116300_4122600
ES.4154.2	chr11	-	4096	1	Antisense	novelGene_ENSMUSG00000002129.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACCCATGTCTTTGAT	788	False	NA	NA	False	AATATA	-10	NA	4122631	4118535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4118500_4122600
ES.4155.1	chr11	+	1955	9	FSM	ENSMUSG00000034412.14	ENSMUST00000041042.13	1957	9	3	-1	3	1	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTATAGTTAGGACC	1552	False	NA	25	True	AATAAA	-16	NA	4136791	4165506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.10	chr11	+	3136	5	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	4	1	intron_retention	FALSE	canonical	3	291	junction_4	23.636571240347	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTGTGTATAGTTAGG	1586	False	NA	22	True	AATAAA	-13	NA	4136825	4165503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4163992_4164700
ES.4155.11	chr11	+	1697	9	NNC	ENSMUSG00000034412.14	novel	1921	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.214398377592	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	1586	False	NA	21	True	AATAAA	-12	NA	4136825	4165502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4136880_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.13	chr11	+	2057	1	NIC	ENSMUSG00000034412.14	novel	1230	8	NA	NA	17	-21095	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACCATGCCTGGCACAGG	1599	False	NA	NA	False	NA	NA	NA	4136838	4138895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4136800_4138900
ES.4155.14	chr11	+	1927	9	NNC	ENSMUSG00000034412.14	novel	1921	9	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	111.128233923697	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	1600	False	NA	21	True	AATAAA	-12	NA	4136839	4165502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162953_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.15	chr11	+	1665	7	NNC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	27	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	122.160641051945	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTATAGTTAGGACC	1609	False	NA	25	True	AATAAA	-16	NA	4136848	4165506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162988_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.16	chr11	+	6810	7	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	-4294	-1	intron_retention	FALSE	canonical	3	291	junction_6	28.4941514466858	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTGTATAGTTAGGA	NA	False	NA	23	True	AATAAA	-14	NA	4151128	4165504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.17	chr11	+	1544	6	ISM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	25212	-2	-277	-1	3prime_fragment	FALSE	canonical	3	291	junction_5	31.4579083856508	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTGTATAGTTAGGA	927	False	NA	23	True	AATAAA	-14	NA	4162033	4165504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.2	chr11	+	1834	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	118.852678487586	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTGTATAGTTAGGA	1563	False	NA	23	True	AATAAA	-14	NA	4136802	4165504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.3	chr11	+	3822	9	FSM	ENSMUSG00000034412.14	ENSMUST00000041042.13	1957	9	16	-1881	16	1881	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATTTAAAAAA	1565	False	NA	NA	False	NA	NA	NA	4136804	4167386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.4	chr11	+	2558	7	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	291	junction_6	29.0095769627128	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTGTATAGTTAGGA	1574	False	NA	23	True	AATAAA	-14	NA	4136813	4165504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163992_4164700
ES.4155.5	chr11	+	1961	10	NNC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	142.963864898326	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTATAGTTAGGACC	1577	False	NA	25	True	AATAAA	-16	NA	4136816	4165506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164591_4164623_4164700
ES.4155.6	chr11	+	2461	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	291	junction_7	26.8639808924097	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGTGTATAGTTAGGA	1581	False	NA	23	True	AATAAA	-14	NA	4136820	4165504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4155.7	chr11	+	5172	5	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	1	2	intron_retention	FALSE	canonical	3	291	junction_4	28.5744641244591	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTATAGTTAGGACCC	1583	False	NA	26	True	AATAAA	-17	NA	4136822	4165507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4159925_4162900_4162977_4163992_4164700
ES.4155.8	chr11	+	3049	6	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	291	junction_5	21.1471038206181	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1585	False	NA	24	True	AATAAA	-15	NA	4136824	4165505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4163747_4163836_4163992_4164700
ES.4155.9	chr11	+	5986	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	3	-1	intron_retention	FALSE	canonical	3	291	junction_7	27.4947119219946	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGCTGTGTATAGTTA	1585	False	NA	20	True	AATAAA	-11	NA	4136824	4165501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4137100_4155756_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ES.4156.1	chr11	-	901	1	Intergenic	novelGene_3180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCATC	NA	False	NA	NA	False	AAAAAG	-6	NA	4145945	4145044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4145000_4145900
ES.4157.1	chr11	+	1644	10	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	-121	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	42.6686920815557	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGACAGCTGGCGTC	6997	False	NA	19	True	AATAAA	-27	NA	4168103	4172411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842_4172019_4172071
ES.4157.2	chr11	+	1631	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	-45	-12	-45	12	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCGTCATGTCTTGGT	7073	False	NA	29	True	AATAAA	-37	NA	4168179	4172421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ES.4157.4	chr11	+	1427	10	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	55.4472277190519	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7126	False	NA	17	True	AATAAA	-25	NA	4168232	4172409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4168341_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842_4172019_4172071
ES.4157.5	chr11	+	2107	7	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	8	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	50.5692594369346	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCTGAGTGACAGCTGG	7126	False	NA	15	True	AATAAA	-23	NA	4168232	4172407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4168427_4168947_4169019_4170107_4171260_4171423_4171507_4171600_4171696_4171842_4172019_4172071
ES.4157.6	chr11	+	1487	10	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	39	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	42.6686920815557	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGCTGGCGTCATGTCT	7157	False	NA	25	True	AATAAA	-33	NA	4168263	4172417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842_4172022_4172077
ES.4157.7	chr11	+	1477	10	NNC	ENSMUSG00000020424.4	novel	1574	9	NA	NA	46	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	42.6686920815557	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7164	False	NA	17	True	AATAAA	-25	NA	4168270	4172409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842_4172042_4172092
ES.4157.8	chr11	+	1294	7	ISM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	1881	9	1881	-9	3prime_fragment	FALSE	canonical	3	115	junction_1	12.7540843131393	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCTGGTTCTGAGTGA	8999	False	NA	8	True	AATAAA	-16	NA	4170105	4172400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ES.4158.1	chr11	-	136	1	Intergenic	novelGene_3181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4173323	4173187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4173200_4173300
ES.4159.1	chr11	-	3291	2	Genic_Genomic	ENSMUSG00000084012.2	novel	512	1	NA	NA	-2912	64	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-43	NA	4184177	4180689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_4183509_4183705
ES.4159.2	chr11	-	168	1	Intergenic	novelGene_3182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	4182322	4182154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4182200_4182300
ES.416.1	chr1	+	1268	7	NNC	ENSMUSG00000041144.13	novel	740	4	NA	NA	-13723	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.46249406456535	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGACTTTATTCTGGC	NA	False	NA	NA	False	AATAAA	-13	NA	46382056	46412698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_46382215_46382893_46383032_46391974_46392206_46395664_46395818_46397288_46397467_46402062_46402167_46412392
ES.416.2	chr1	+	1094	7	NNC	ENSMUSG00000041144.13	novel	740	4	NA	NA	-13546	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.21335164821342	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTGCTTTGGCTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	46382233	46412662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_46382254_46382893_46383032_46391974_46392206_46395664_46395818_46397288_46397467_46402062_46402167_46412392
ES.4160.1	chr11	+	2539	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	-269	2	-269	-2	multi-exon	TRUE	canonical	3	46	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTGTCAGTCTTTT	8024	False	NA	3	True	TTTAAA	-16	NA	4186150	4191024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4186914_4188405_4188543_4189385
ES.4160.2	chr11	+	2175	2	FSM	ENSMUSG00000058755.4	ENSMUST00000131764.2	773	2	-42	-1360	-42	-2	multi-exon	FALSE	canonical	3	8	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTGTCAGTCTTTT	8251	False	NA	3	True	TTTAAA	-16	NA	4186377	4191024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4186914_4189385
ES.4160.3	chr11	+	1952	3	NNC	ENSMUSG00000058755.4	novel	773	2	NA	NA	1224	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTGTCAGTCTTTT	772	False	NA	3	True	TTTAAA	-16	NA	4187643	4191024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4187820_4188405_4188543_4189385
ES.4161.1	chr11	-	2806	3	Intergenic	novelGene_3183	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTGAAATCTG	NA	False	NA	NA	False	NA	NA	NA	4196177	4192071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4194042_4194129_4194922_4196133
ES.4162.1	chr11	+	1165	1	Intergenic	novelGene_3184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGCATTTAACTGGG	NA	False	NA	NA	False	NA	NA	NA	4201649	4202814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4201600_4202800
ES.4163.1	chr11	+	4340	3	NIC	ENSMUSG00000034394.15	novel	4026	4	NA	NA	-433	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGTGCATTGATTT	NA	False	NA	NA	False	AATAAA	-20	NA	4207123	4222516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4207689_4218183_4218366_4218923
ES.4163.2	chr11	+	4637	4	NIC	ENSMUSG00000034394.15	novel	4026	4	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.59966329107444	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGCATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4207447	4222514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4207689_4216496_4217120_4218183_4218366_4218923
ES.4163.3	chr11	+	4092	5	NNC	ENSMUSG00000034394.15	novel	4026	4	NA	NA	32	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.75925291729789	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTGGAGTGCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	4207588	4222513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4207689_4216496_4216618_4217020_4217120_4218183_4218366_4218923
ES.4163.4	chr11	+	1176	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	-39	2661	-39	1604	multi-exon	FALSE	canonical	3	7	junction_1	5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	4217055	4219853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4217120_4218183_4218366_4218923
ES.4163.5	chr11	+	3886	3	NNC	ENSMUSG00000034394.15	novel	4026	4	NA	NA	311	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTGGAGTGCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	4217405	4222513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4217520_4218183_4218366_4218923
ES.4164.1	chr11	-	181	1	Intergenic	novelGene_3185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	4274146	4273965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4274000_4274100
ES.4165.1	chr11	+	176	1	Intergenic	novelGene_3186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACCTT	9734	False	NA	NA	False	NA	NA	NA	4276404	4276580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4276400_4276600
ES.4166.1	chr11	+	176	1	Intergenic	novelGene_3187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAATAGAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	4304509	4304685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4304500_4304700
ES.4167.1	chr11	+	6032	1	Intergenic	novelGene_3189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTAGCTTAGAATGCCAA	5057	False	NA	NA	False	NA	NA	NA	4321219	4327251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4321200_4327300
ES.4167.2	chr11	+	151	1	Intergenic	novelGene_3190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	9046	False	NA	NA	False	NA	NA	NA	4325208	4325359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4325200_4325400
ES.4168.1	chr11	+	6036	2	Antisense	novelGene_ENSMUSG00000020419.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	4328127	4334346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_4328228_4328410
ES.4169.1	chr11	+	3016	1	Intergenic	novelGene_3192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAGAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4336877	4339893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4336900_4339900
ES.417.1	chr1	+	220	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATCAGGTTACCTTTGA	NA	False	NA	NA	False	NA	NA	NA	46825082	46825302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_46825100_46825300
ES.4170.1	chr11	-	5244	13	NNC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	1	77	intron_retention	FALSE	canonical	1	4	junction_7	68.0171546988944	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGCACTGTGTGCG	NA	False	NA	57	True	GATAAA	-17	NA	4391104	4295736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4373796_4374270_4374308_4374755_4374820_4375505_4375627_4377243_4377386_4385001_4385090_4385726_4385935_4390876_4390941_4391080
ES.4170.10	chr11	-	1870	10	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	31	16	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	73.2602329261589	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATGGGGTTTAATA	NA	False	NA	-4	True	AATAAA	-27	NA	4391051	4295797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.11	chr11	-	3700	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-112	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.4332349825336	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATGGGGTTTAATA	NA	False	NA	-4	True	AATAAA	-27	NA	4391217	4295797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4372429_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4391080
ES.4170.12	chr11	-	4695	10	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-9	16	intron_retention	FALSE	canonical	1	1	junction_4	82.0480136457299	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATGGGGTTTAATA	NA	False	NA	-4	True	AATAAA	-27	NA	4391091	4295797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362340_4362506_4370703_4370731_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.13	chr11	-	3315	11	NNC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	-10	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	67.3525055213241	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAACATGGGGTTTAAT	NA	False	NA	-5	True	AATAAA	-26	NA	4391092	4295798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4373060_4373640_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4391015
ES.4170.14	chr11	-	3590	6	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	5867	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.3585713960314	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4371395	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4363917_4364091_4369316
ES.4170.15	chr11	-	1405	6	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-4	11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	78.6857039111934	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391086	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4296667_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.16	chr11	-	4675	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-62	11	intron_retention	FALSE	canonical	0	0	junction_5	79.6055274462773	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391167	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4363917_4364091_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ES.4170.17	chr11	-	1846	12	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-40	11	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	68.3951813101353	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391145	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ES.4170.18	chr11	-	4641	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-4	11	intron_retention	FALSE	canonical	0	0	junction_1	80.3843268305458	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391086	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4298193_4298247_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.19	chr11	-	3707	9	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	2483	11	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	58.8195067558374	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4374779	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4369316_4369497_4370703_4370731_4371588_4373060_4373640_4374308_4374755
ES.4170.2	chr11	-	3625	14	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-37	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.161508188628	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTGCACTGTGTGCG	NA	False	NA	57	True	GATAAA	-17	NA	4391142	4295736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4340152_4340189_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4373133_4373638_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ES.4170.20	chr11	-	3507	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	81.1221917849857	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGTAACATGGGGTT	NA	False	NA	-9	True	AATAAA	-22	NA	4391082	4295802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4371588_4371610_4372429_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.22	chr11	-	8674	5	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	6008	10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	27.5454170416786	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATGTAACATGGGGT	NA	False	NA	-10	True	AATAAA	-21	NA	4371254	4295803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4363917
ES.4170.23	chr11	-	2449	8	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-10	10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	26.3531743044053	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATGTAACATGGGGT	NA	False	NA	-10	True	AATAAA	-21	NA	4391092	4295803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4372944_4373793_4390876
ES.4170.25	chr11	-	3203	9	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-3	10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	76.6028720088222	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATGTAACATGGGGT	NA	False	NA	-10	True	AATAAA	-21	NA	4391085	4295803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4372944_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.26	chr11	-	3528	12	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	76.8451270655401	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTATGTAACATGGGG	NA	False	NA	-11	True	AATAAA	-20	NA	4391082	4295804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4373060_4373638_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.27	chr11	-	1770	7	NNC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	21	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.3934149686836	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTATGTAACATGGGG	NA	False	NA	-11	True	AATAAA	-20	NA	4391061	4295804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362286_4372904_4373133_4373640_4373796_4391015
ES.4170.28	chr11	-	3765	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	75.0263953552348	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTATGTAACATGGGG	NA	False	NA	-11	True	AATAAA	-20	NA	4391085	4295804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4372429_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.29	chr11	-	3580	13	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.8767705491341	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATTTATGTAACATGG	NA	False	NA	-13	True	AATAAA	-18	NA	4391085	4295806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4342587_4342641_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4373060_4373640_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.3	chr11	-	2153	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	0	74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.2709909109253	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTGTGCACTGTGT	NA	False	NA	54	True	GATAAA	-14	NA	4391103	4295739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4363917_4364091_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.30	chr11	-	4570	9	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	15	junction_4	73.9319788724744	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGATAATTTATGTAA	NA	False	NA	-18	True	AATAAA	-13	NA	4391104	4295811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.31	chr11	-	1871	13	NNC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.6917634591476	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391145	4295813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4340152_4340189_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ES.4170.33	chr11	-	4480	10	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	77.900855000934	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391080	4295813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359068_4362212_4362281_4370703_4370731_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.34	chr11	-	5398	9	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	33	0	intron_retention	FALSE	canonical	3	44	junction_4	69.0614536119824	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391049	4295813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.35	chr11	-	3986	5	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	10341	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	28.3901391331568	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4366921	4295813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4363939_4365920
ES.4170.36	chr11	-	1991	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.7459089859787	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGTTTGATAATTTAT	NA	False	NA	-22	True	AATAAA	-9	NA	4391092	4295815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4374254_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4387197_4387274_4390876
ES.4170.37	chr11	-	1408	11	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-3	-5825	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1694086713471	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCATAAAAGACTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	4391085	4302207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4302554_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.38	chr11	-	1140	1	Intergenic	novelGene_3188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4318767	4317627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4317600_4318800
ES.4170.39	chr11	-	136	1	Intergenic	novelGene_3191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	4329188	4329052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4329100_4329200
ES.4170.4	chr11	-	4474	11	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	0	20	intron_retention	FALSE	canonical	3	44	junction_4	69.453941572815	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGGGTTTAATAATTG	NA	False	NA	0	True	AATAAA	-31	NA	4391103	4295793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876_4390941_4391080
ES.4170.40	chr11	-	6445	11	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-4	37046	intron_retention	FALSE	canonical	0	0	junction_1	88.1791358542371	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAATTTA	NA	False	NA	NA	False	NA	NA	NA	4391086	4337021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4339610_4340152_4340189_4358589_4358844_4359006_4359159_4362340_4362506_4370703_4370731_4371588_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.41	chr11	-	3985	13	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	0	37045	intron_retention	FALSE	canonical	0	0	junction_1	84.5126551996143	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	4391082	4337022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4337198_4340152_4340189_4351444_4351622_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4373133_4373638_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.42	chr11	-	1621	12	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	0	34984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.7238170417356	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCTGTGTAGTTAA	NA	False	NA	NA	False	NA	NA	NA	4391082	4339083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4339610_4340152_4340189_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.43	chr11	-	4624	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	21	-4062	-2	3882	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGATCTTCTGGAAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	4391084	4370185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.44	chr11	-	3082	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	-4	-2495	-4	2315	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTTTGAATGGGTGAA	NA	False	NA	NA	False	AGTAAA	-18	NA	4391109	4371752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.45	chr11	-	5088	4	NIC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-1	1923	intron_retention	FALSE	canonical	3	187	junction_3	10.0332779621949	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTATATGCTAAAATAG	NA	False	NA	43	True	TATAAA	-15	NA	4391083	4372144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4374308_4374755_4377386_4385001_4385090_4390876
ES.4170.46	chr11	-	2490	5	NIC	ENSMUSG00000020419.12	novel	1915	12	NA	NA	-9	1880	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	77.2572812102523	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTGGTCATAAAAATC	NA	False	NA	0	True	AATAAA	-15	NA	4391091	4372187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4391015
ES.4170.47	chr11	-	2629	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	13	-2059	-10	1879	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGGTCATAAAAAT	NA	False	NA	-1	True	AATAAA	-14	NA	4391092	4372188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.48	chr11	-	2505	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-7	1879	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	94.1870479418481	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGGTCATAAAAAT	NA	False	NA	-1	True	AATAAA	-14	NA	4391112	4372188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390790
ES.4170.49	chr11	-	2382	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	2	1878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.6857039111934	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGTGGTCATAAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	4391080	4372189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374041_4374274_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.5	chr11	-	3058	1	Genic_Genomic	ENSMUSG00000020419.12	novel	NA	NA	NA	NA	78410	19	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGGGGTTTAATAATT	NA	False	NA	-1	True	AATAAA	-30	NA	4298852	4295794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_4295800_4298900
ES.4170.50	chr11	-	2546	7	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	2	1878	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	96.2265844533389	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGTGGTCATAAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	4391080	4372189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4385774_4385935_4390876
ES.4170.52	chr11	-	4366	5	NIC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-10	1878	intron_retention	FALSE	canonical	2	4	junction_2	83.5912674865024	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTGTGGTCATAAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	4391092	4372189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4374308_4374755_4374820_4375505_4377386_4385001_4385090_4390876
ES.4170.53	chr11	-	2274	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-68	1877	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	88.3275721391684	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTGTGTGGTCATAAAA	NA	False	NA	-3	True	AATAAA	-12	NA	4391173	4372190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4391080
ES.4170.54	chr11	-	698	6	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-10	178	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	73.5129920490249	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTGTTAATTATA	NA	False	NA	NA	False	AAGAAA	-26	NA	4391092	4373889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.55	chr11	-	593	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	19	-29	-4	29	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTTAGACATTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	4391086	4374218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.56	chr11	-	476	5	NNC	ENSMUSG00000020419.12	novel	583	5	NA	NA	-68	29	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	75.5326915977446	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTTAGACATTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	4391173	4374218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4391080
ES.4170.57	chr11	-	177	1	Intergenic	novelGene_3193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTTATGGTAA	NA	False	NA	NA	False	NA	NA	NA	4384105	4383928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4383900_4384100
ES.4170.58	chr11	-	2253	1	Genic_Genomic	ENSMUSG00000020419.12	novel	NA	NA	NA	NA	-110	-11649	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATATACCTTTAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	4391215	4388962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_4389000_4391200
ES.4170.6	chr11	-	4361	13	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-40	19	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	81.4149180979069	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGGGGTTTAATAATT	NA	False	NA	-1	True	AATAAA	-30	NA	4391145	4295794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4342587_4342641_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4373060_4373176_4374041_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.7	chr11	-	2280	13	NNC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	-1	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	78.5805938016647	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATGGGGTTTAATAAT	NA	False	NA	-2	True	AATAAA	-29	NA	4391106	4295795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4372888_4373060_4373640_4373796_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ES.4170.8	chr11	-	9366	4	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	6832	17	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	26.7374061735406	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATGGGGTTTAATAA	NA	False	NA	-3	True	AATAAA	-28	NA	4370430	4295796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362340
ES.4170.9	chr11	-	1768	4	NNC	ENSMUSG00000020419.12	novel	1969	11	NA	NA	7453	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.9481032602883	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATGGGGTTTAATA	NA	False	NA	-4	True	AATAAA	-27	NA	4369809	4295797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4296667_4358589_4358844_4359006_4359159_4369316
ES.4171.1	chr11	+	155	1	Intergenic	novelGene_3194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	4394448	4394603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4394400_4394600
ES.4172.1	chr11	-	178	1	Intergenic	novelGene_3195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	7003	False	NA	NA	False	NA	NA	NA	4420281	4420103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4420100_4420300
ES.4173.1	chr11	+	212	1	Intergenic	novelGene_3197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGCTGTGATATAATA	NA	False	NA	NA	False	NA	NA	NA	4468439	4468651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4468400_4468700
ES.4174.1	chr11	+	179	1	Intergenic	novelGene_3198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACCCAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	4475497	4475676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4475500_4475700
ES.4175.1	chr11	+	6535	1	Intergenic	novelGene_3199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCCAAAAGTAC	NA	False	NA	NA	False	NA	NA	NA	4488171	4494706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4488200_4494700
ES.4176.1	chr11	+	188	1	Intergenic	novelGene_3201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4517524	4517712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4517500_4517700
ES.4177.1	chr11	+	923	1	Intergenic	novelGene_3202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAATGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4531597	4532520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4531600_4532500
ES.4178.1	chr11	+	204	1	Intergenic	novelGene_3203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGCATTGACAGCCAG	NA	False	NA	NA	False	AAAAAG	-4	NA	4537930	4538134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4537900_4538100
ES.4179.1	chr11	-	5736	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	-48	-14	0	14	multi-exon	TRUE	canonical	3	144	junction_2	25.6297837124855	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCCTGTAGTTTAA	NA	False	NA	2	True	AATAAA	-41	NA	4544863	4430853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.11	chr11	-	5211	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.6459542304939	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544796	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4431083_4431527_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.12	chr11	-	5096	13	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	38	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	63.3747123596365	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544777	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4544602
ES.4179.13	chr11	-	5394	20	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.9236551846109	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544868	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4431083_4431527_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.14	chr11	-	5647	18	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	57.202971345865	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544811	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448039_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.15	chr11	-	5567	18	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	52	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	70.3121069769869	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544763	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.17	chr11	-	5438	16	NIC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	70.4072597266945	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACGAGTTCTAATTCTTT	NA	False	NA	-12	True	AATAAA	-27	NA	4544759	4430867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4544602
ES.4179.19	chr11	-	5848	20	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	75.6587688736687	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACGAGTTCTAATTCTTT	NA	False	NA	-12	True	AATAAA	-27	NA	4544798	4430867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496269_4544602
ES.4179.2	chr11	-	5813	19	NNC	ENSMUSG00000034354.18	novel	5534	18	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_18	68.2081961694587	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTAATTCTTTGCCCTG	NA	False	NA	-6	True	AATAAA	-33	NA	4544868	4430861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496269_4544602
ES.4179.21	chr11	-	5207	14	NIC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	36	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	74.3500436723667	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAACGAGTTCTAATTCTT	NA	False	NA	-13	True	AATAAA	-26	NA	4544779	4430868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4544602
ES.4179.22	chr11	-	5730	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	71.7407024990816	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGAACGAGTTCTAATTCT	NA	False	NA	-14	True	AATAAA	-25	NA	4544780	4430869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4485620_4485714_4544602
ES.4179.23	chr11	-	6824	17	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	56	3	intron_retention	FALSE	canonical	3	144	junction_2	26.4054178862975	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCGAACGAGTTCTAATT	NA	False	NA	-16	True	AATAAA	-23	NA	4544759	4430871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.24	chr11	-	5802	19	NNC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	271	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	68.018175675493	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCGAACGAGTTCTAAT	NA	False	NA	-17	True	AATAAA	-22	NA	4544544	4430872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544309
ES.4179.25	chr11	-	5544	17	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	56.0255243170468	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCGAACGAGTTCTAA	NA	False	NA	-18	True	AATAAA	-21	NA	4544780	4430873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.26	chr11	-	6966	18	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	57	1	intron_retention	FALSE	canonical	3	86	junction_2	36.6449343166646	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCGAACGAGTTCTAA	NA	False	NA	-18	True	AATAAA	-21	NA	4544758	4430873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.27	chr11	-	5353	15	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	24	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	59.2857573149586	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCGAACGAGTTCTAA	NA	False	NA	-18	True	AATAAA	-21	NA	4544791	4430873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4544602
ES.4179.28	chr11	-	5875	20	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	78.173363700456	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	NA	False	NA	-19	True	AATAAA	-20	NA	4544784	4430874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4499228_4499357_4544602
ES.4179.29	chr11	-	6457	17	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	0	intron_retention	FALSE	canonical	3	144	junction_2	25.7897145195522	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	NA	False	NA	-19	True	AATAAA	-20	NA	4544780	4430874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.3	chr11	-	5842	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	-5	4	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTCTAATTCTTTGCCC	NA	False	NA	-8	True	AATAAA	-31	NA	4544868	4430863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.30	chr11	-	5876	20	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	77.1236011963643	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	NA	False	NA	-19	True	AATAAA	-20	NA	4544781	4430874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4434565_4434698_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.31	chr11	-	8238	16	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	-1	intron_retention	FALSE	canonical	3	193	junction_6	17.7042367810646	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCTGCGAACGAGTTCT	NA	False	NA	-20	True	AATAAA	-19	NA	4544780	4430875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.32	chr11	-	5876	18	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55.1868797405845	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCTGCGAACGAGTTCT	NA	False	NA	-20	True	AATAAA	-19	NA	4544792	4430875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437000_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.36	chr11	-	5716	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5419808735401	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGGCATCTGCGAACGA	NA	False	NA	-25	True	AATAAA	-14	NA	4544780	4430880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435899_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.37	chr11	-	5584	19	NNC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	-7239	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	67.5491590538986	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGGCATCTGCGAACGA	NA	False	NA	-25	True	AATAAA	-14	NA	4485645	4430880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4485620
ES.4179.38	chr11	-	4608	8	NNC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	-4318	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.060315211184	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTGGCATCTGCGAAC	NA	False	NA	-27	True	AATAAA	-12	NA	4447636	4430882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437000_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447505
ES.4179.39	chr11	-	5630	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	2	-179	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACTTTTTTATTAAT	NA	False	NA	NA	False	AATAAA	-31	NA	4544861	4431068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.4	chr11	-	4823	17	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.0255243170468	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTTCTAATTCTTTGC	NA	False	NA	-10	True	AATAAA	-29	NA	4544870	4430865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432324_4437436_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.40	chr11	-	5522	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	-53	205	-5	-183	multi-exon	FALSE	canonical	3	144	junction_2	25.6297837124855	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAAGCACTTTTTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	4544868	4431072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.41	chr11	-	5374	18	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	85	-186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	57.0226689579373	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAATGAAGCACTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	4544730	4431075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478400_4481221_4481306_4544602
ES.4179.42	chr11	-	5540	20	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	56	-194	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	77.4840525098668	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTTTTGATCAATGAAG	NA	False	NA	NA	False	AATAAA	-16	NA	4544759	4431083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4434670_4434698_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.44	chr11	-	5504	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	50	-195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	67.8679045583095	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTTTTTGATCAATGAA	NA	False	NA	NA	False	AATAAA	-15	NA	4544765	4431084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442732_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.46	chr11	-	4057	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	-43	1660	5	31	multi-exon	FALSE	canonical	3	144	junction_2	25.6297837124855	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCAGAGGTTGCCAGG	NA	False	NA	22	True	AAAAAG	-37	NA	4544858	4432527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.47	chr11	-	4658	7	NIC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	-4312	15	intron_retention	FALSE	canonical	3	193	junction_6	17.6729548557487	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTTTAATGGAAG	NA	False	NA	6	True	AAAAAG	-21	NA	4447630	4432543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337
ES.4179.48	chr11	-	4155	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	-2	11	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATTTTTTTTTTAATG	NA	False	NA	2	True	AAAAAG	-17	NA	4544865	4432547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.49	chr11	-	4234	20	NNC	ENSMUSG00000034354.18	novel	5534	18	NA	NA	-2	10	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	75.6587688736687	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTTTTTTTTAAT	NA	False	NA	1	True	AAAAAG	-16	NA	4544865	4432548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496269_4544602
ES.4179.5	chr11	-	5100	14	NNC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	10587	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	74.7730293432048	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTTCTAATTCTTTGC	NA	False	NA	-10	True	AATAAA	-29	NA	4467819	4430865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439752_4440973_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740
ES.4179.50	chr11	-	4074	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	6	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5419808735401	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAATTTTTTTTTT	NA	False	NA	-2	True	AAAAAG	-13	NA	4544809	4432551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4435899_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.51	chr11	-	4092	20	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	77.4840525098668	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAATTTTTTTTT	NA	False	NA	-3	True	AAAAAG	-12	NA	4544780	4432552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4434670_4434698_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.52	chr11	-	3615	15	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	75	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	76.1879054625832	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAATTTTTTTTT	NA	False	NA	-3	True	AAAAAG	-12	NA	4544740	4432552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442726_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4544602
ES.4179.53	chr11	-	3949	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	71	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	81.9764344337391	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAATTTTTTTTT	NA	False	NA	-3	True	AAAAAG	-12	NA	4544744	4432552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4434670_4434698_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477831_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.54	chr11	-	4254	20	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	23	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	80.9478817313134	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTCTTAATTTTTTTT	NA	False	NA	-4	True	AAAAAG	-11	NA	4544840	4432553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4489677_4489775_4496124_4496269_4544602
ES.4179.55	chr11	-	4057	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_18	69.5569089325202	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTTGTCTTAATTTTT	NA	False	NA	-7	True	AAAAAG	-8	NA	4544810	4432556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188_4496266_4544602
ES.4179.56	chr11	-	3534	14	NIC	ENSMUSG00000034354.18	novel	5466	17	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	74.3500436723667	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGTTGTCTTAATTT	NA	False	NA	-9	True	AAAAAG	-6	NA	4544796	4432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4544602
ES.4179.57	chr11	-	3936	18	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	50	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.9981750731745	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAATATCCCAGT	NA	False	NA	-20	True	NA	NA	NA	4544765	4432569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432950_4435352_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481300_4544602
ES.4179.58	chr11	-	3937	19	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	110	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	71.3030612471153	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAATATCCCAGT	NA	False	NA	-20	True	NA	NA	NA	4544705	4432569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4499281_4499357_4544602
ES.4179.59	chr11	-	3454	16	ISM	ENSMUSG00000034354.18	ENSMUST00000130716.8	4040	18	107	4675	59	-4482	5prime_fragment	FALSE	canonical	3	193	junction_5	17.873133158148	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTAGGTCAGGATTCC	NA	False	NA	NA	False	NA	NA	NA	4544756	4437233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.60	chr11	-	1576	12	NNC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	35	-3723	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	65.9714438598905	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGAGTGTTTAGATTA	NA	False	NA	NA	False	NA	NA	NA	4544780	4445529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4445726_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.61	chr11	-	2696	11	ISM	ENSMUSG00000034354.18	ENSMUST00000130716.8	4040	18	4	13542	4	-4294	5prime_fragment	FALSE	canonical	3	195	junction_2	18.9581117203164	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCATCGAGA	NA	False	NA	NA	False	NA	NA	NA	4544859	4446100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ES.4179.62	chr11	-	228	1	Intergenic	novelGene_3196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCTTACATAGGCTTT	7830	False	NA	NA	False	AAGAAA	-5	NA	4456467	4456239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4456200_4456500
ES.4179.63	chr11	-	155	1	Intergenic	novelGene_3200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4516790	4516635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4516600_4516800
ES.4179.7	chr11	-	5839	20	NNC	ENSMUSG00000034354.18	novel	5534	18	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	80.5937454183264	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	NA	False	NA	-11	True	AATAAA	-28	NA	4544811	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4485620_4485709_4496188_4496269_4544602
ES.4179.8	chr11	-	5025	1	Genic_Genomic	ENSMUSG00000034354.18	novel	NA	NA	NA	NA	2475	1	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAGTTCTAATTCTTTG	5278	False	NA	-11	True	AATAAA	-28	NA	4435891	4430866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_4430900_4435900
ES.418.1	chr1	-	5844	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	497	-843	497	843	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCACCTCTTCCCTGGGGG	425	False	NA	NA	False	AATAAA	-35	NA	46892709	46845860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.10	chr1	-	4889	9	NIC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	528	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	93.7149934642264	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	456	False	NA	NA	False	AATAAA	-16	NA	46892678	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_46849272_46851145_46851337_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.13	chr1	-	4261	1	NIC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	24095	0	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	3101	False	NA	NA	False	AATAAA	-16	NA	46850964	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_46846700_46851000
ES.418.14	chr1	-	5210	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	422	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	105.535823301853	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	350	False	NA	NA	False	AATAAA	-16	NA	46892784	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
ES.418.15	chr1	-	5172	10	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	350	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.1211287565776	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	278	False	NA	NA	False	AATAAA	-16	NA	46892856	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871948_46874286_46875312_46892630
ES.418.16	chr1	-	5219	12	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	527	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	122.113278936248	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	455	False	NA	NA	False	AATAAA	-16	NA	46892679	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46879225_46879340_46880907_46881042_46892630
ES.418.18	chr1	-	5106	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	526	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.40793623023	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTGTTTTCATTG	454	False	NA	NA	False	AATAAA	-14	NA	46892680	46846705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859218_46859355_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.19	chr1	-	4361	9	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	192	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.6538416634734	392	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTGTTTTCATTG	NA	False	NA	NA	False	AATAAA	-14	NA	46874867	46846705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865367_46865442_46866502_46866673_46871715_46871924_46874286
ES.418.2	chr1	-	7072	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	1247	827	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	108.165613759642	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTACCCAACTGTTCATC	1175	False	NA	NA	False	AATAAA	-19	NA	46891959	46845876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46890770
ES.418.20	chr1	-	5341	12	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	744	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	121.130624117824	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTGTTTTCATTG	672	False	NA	NA	False	AATAAA	-14	NA	46892462	46846705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46881442_46881564_46892296
ES.418.21	chr1	-	4973	10	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	508	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	88.1211287565776	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTGTTTTCATTG	436	False	NA	NA	False	AATAAA	-14	NA	46892698	46846705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874301_46875312_46892630
ES.418.22	chr1	-	5268	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	696	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	108.165613759642	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTGTTTTCATTG	624	False	NA	NA	False	AATAAA	-14	NA	46892510	46846705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892296
ES.418.23	chr1	-	5002	10	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	496	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	89.7301854051328	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGTGGTGTGTTTTC	424	False	NA	NA	False	AATAAA	-10	NA	46892710	46846709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858600_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.24	chr1	-	4478	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	517	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2117949582099	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGTGGTGTGTTTTC	445	False	NA	NA	False	AATAAA	-10	NA	46892689	46846709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46847908_46848404_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.25	chr1	-	3384	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	516	-1732	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	105.535823301853	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTGGATTTTTC	444	False	NA	NA	False	AATGAA	-28	NA	46892690	46848435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
ES.418.26	chr1	-	3248	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	517	1733	517	-1733	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTGGATTTTT	445	False	NA	NA	False	AATGAA	-27	NA	46892689	46848436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.28	chr1	-	225	1	Genic_Genomic	ENSMUSG00000025986.7	novel	NA	NA	NA	NA	18074	1	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	46856985	46856760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_46856800_46857000
ES.418.29	chr1	-	4552	4	NNC	ENSMUSG00000025986.7	novel	565	2	NA	NA	516	6662	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.297730012796	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACGTAATGTTGTCTT	444	False	NA	NA	False	NA	NA	NA	46892690	46868137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46871397_46871715_46871924_46874286_46875312_46892630
ES.418.3	chr1	-	5565	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	530	825	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.2117949582099	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTACCCAACTGTTCA	458	False	NA	NA	False	AATAAA	-17	NA	46892676	46845878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46846823_46847050_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.30	chr1	-	3981	2	Genic_Genomic	ENSMUSG00000100213.2	novel	951	1	NA	NA	-3072	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATGGTGACTTTGTTTT	423	False	NA	NA	False	AATAAA	-18	NA	46892711	46888688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_46890143_46890184
ES.418.4	chr1	-	5904	11	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	549	821	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	105.535823301853	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATTACCCAACTG	477	False	NA	NA	False	AATAAA	-13	NA	46892657	46845882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46880907_46881042_46892630
ES.418.5	chr1	-	5695	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	521	-718	521	718	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTAGTAGTGGTTTCTT	449	False	NA	-1	True	AGTAAA	-15	NA	46892685	46845985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.6	chr1	-	5357	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	142	-1	142	1	multi-exon	FALSE	canonical	3	237	junction_4	21.0736509753792	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTGTTTTCATTGTCT	-7	True	NA	NA	False	AATAAA	-17	NA	46893064	46846702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.8	chr1	-	6069	9	NIC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	518	0	intron_retention	FALSE	canonical	3	245	junction_6	16.867127793433	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	446	False	NA	NA	False	AATAAA	-16	NA	46892688	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ES.418.9	chr1	-	4959	10	NNC	ENSMUSG00000025986.7	novel	5498	10	NA	NA	533	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.8126994787169	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	461	False	NA	NA	False	AATAAA	-16	NA	46892673	46846703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866667_46871715_46871924_46874286_46875312_46892630
ES.4180.1	chr11	-	203	1	Intergenic	novelGene_3204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTTTTTTTAATTAG	NA	False	NA	NA	False	NA	NA	NA	4566409	4566206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4566200_4566400
ES.4181.1	chr11	-	179	1	Intergenic	novelGene_3205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAATAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	4566797	4566618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4566600_4566800
ES.4182.1	chr11	-	132	1	Antisense	novelGene_ENSMUSG00000079010.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8270	False	NA	NA	False	NA	NA	NA	4571711	4571579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4571600_4571700
ES.4183.1	chr11	+	2809	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-74	-85	-74	85	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTTGACTTCCATG	NA	False	NA	93	True	AAGAAA	-20	NA	4587672	4633470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.10	chr11	+	4948	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	82.1106788441486	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGATGCCAGAGTCTCC	NA	False	NA	7	True	AATAAA	-16	NA	4587708	4635692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629200_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.100	chr11	+	1860	10	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	404.414559335429	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTGTGGTGTTGTCTTC	NA	False	NA	10	True	ATTAAA	-10	NA	4823999	4844199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834091_4838869_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.101	chr11	+	2273	8	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	1103	junction_4	76.936761734053	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823999	4844200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4824104_4833367_4833496_4833725_4834117_4838879_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.102	chr11	+	1191	9	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	3	31	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	541.347609558775	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAGTCTGAAGTCGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	4824007	4843648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4833422_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.103	chr11	+	170	1	Intergenic	novelGene_3221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTACTG	NA	False	NA	NA	False	NA	NA	NA	4826987	4827157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4827000_4827200
ES.4183.104	chr11	+	3864	6	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	3192	0	intron_retention	FALSE	non_canonical	0	0	junction_1	515.606594216948	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4836455	4844200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4838037_4838246_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.105	chr11	+	2139	19	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	69.3319310755633	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845317	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.106	chr11	+	2261	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	-25	-1	-2	1	multi-exon	FALSE	canonical	3	228	junction_1	27.0805712775824	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTAGCTCCTTG	NA	False	NA	22	True	ATTAAA	-19	NA	4845317	4878866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.107	chr11	+	3759	19	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_9	70.0813460325099	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845319	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4855756_4860626_4860760_4862780_4862859_4864269_4864418_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.109	chr11	+	2106	18	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	72.0449686560451	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGTTTGTAGCTCC	NA	False	NA	19	True	ATTAAA	-16	NA	4845328	4878863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.11	chr11	+	5466	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	86.1465466516215	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4587708	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.110	chr11	+	4260	19	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	-9	-5	intron_retention	FALSE	canonical	3	228	junction_1	27.7391397945792	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845333	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.112	chr11	+	2249	20	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.3938812445218	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845339	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852069_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.114	chr11	+	2214	20	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8224421302396	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845342	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849806_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.115	chr11	+	874	8	NNC	ENSMUSG00000034274.12	novel	2116	19	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	137.279544978077	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845345	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849790_4849828_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876241_4878674
ES.4183.116	chr11	+	6770	18	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	5	-2	intron_retention	FALSE	canonical	3	228	junction_1	27.5173427541457	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGTTTGTAGCTCC	NA	False	NA	19	True	ATTAAA	-16	NA	4845347	4878863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4874864_4876045_4876237_4878674
ES.4183.117	chr11	+	3015	19	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	11	1	intron_retention	FALSE	canonical	3	228	junction_1	27.8124783256955	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTTTGTAGCTCCTTG	NA	False	NA	22	True	ATTAAA	-19	NA	4845353	4878866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.118	chr11	+	3547	18	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_11	70.4527621566517	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	23	True	ATTAAA	-20	NA	4845353	4878867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4868123_4868226_4869732_4869830_4870376_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.119	chr11	+	5015	20	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8224421302396	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGACTCTGTTTGTAGCT	NA	False	NA	17	True	ATTAAA	-14	NA	4845357	4878861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4848178_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.12	chr11	+	3067	4	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	169.294614996067	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587708	4635699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596681_4632963
ES.4183.120	chr11	+	2250	21	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	88.2006094083255	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACTCTGTTTGTAGC	NA	False	NA	16	True	ATTAAA	-13	NA	4845358	4878860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4861434_4861471_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.121	chr11	+	3398	19	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	16	-7	intron_retention	FALSE	canonical	0	0	junction_8	68.0085551989374	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGACTCTGTTTGTA	NA	False	NA	14	True	ATTAAA	-11	NA	4845358	4878858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860764_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4876237_4878674
ES.4183.122	chr11	+	4345	19	NNC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	16	-2	intron_retention	FALSE	canonical	0	0	junction_9	69.9336766930101	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGTTTGTAGCTCC	NA	False	NA	19	True	ATTAAA	-16	NA	4845358	4878863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4862859_4864269_4864418_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.123	chr11	+	2260	19	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	4387	0	-2482	0	3prime_fragment	FALSE	canonical	3	246	junction_9	24.6722341064296	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	961	False	NA	21	True	ATTAAA	-18	NA	4849729	4878865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.124	chr11	+	4619	18	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	4459	7	-2410	-7	intron_retention	FALSE	canonical	3	246	junction_9	24.0193117228646	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGACTCTGTTTGTA	1033	False	NA	14	True	ATTAAA	-11	NA	4849801	4878858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045
ES.4183.125	chr11	+	3436	11	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	-4738	0	intron_retention	FALSE	canonical	0	0	junction_3	92.1066772823773	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	4860567	4878865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4862859_4864269_4864311_4864521_4864622_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.14	chr11	+	4928	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	72.0505747274757	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587714	4635699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.15	chr11	+	2593	19	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-25	1470	-25	-1470	5prime_fragment	FALSE	canonical	3	209	junction_9	46.0832579866774	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCGTGTTCCCCACTCA	NA	False	NA	NA	False	NA	NA	NA	4587721	4631915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438
ES.4183.16	chr11	+	4908	19	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	75.0261065674254	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCAGAGTCTCCTGTG	NA	False	NA	11	True	AATAAA	-20	NA	4587731	4635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.17	chr11	+	4921	17	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-8	-2	intron_retention	FALSE	canonical	2	14	junction_6	76.4613617701778	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587738	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4630183_4631438_4631519_4632906
ES.4183.18	chr11	+	4678	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	-2028	0	-286	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGGTGGCATGCAC	NA	False	NA	NA	False	AATAAA	-11	NA	4587746	4635413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.19	chr11	+	5991	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	-3341	0	1027	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGATTAGTGTGTTC	NA	False	NA	NA	False	AATAAA	-25	NA	4587746	4636726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.2	chr11	+	5029	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	-64	-2315	-64	1	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGTCTCCTGTGTGTT	NA	False	NA	15	True	AATAAA	-24	NA	4587682	4635700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.20	chr11	+	2671	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	100.957552961628	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587749	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.21	chr11	+	2235	13	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	3	-13558	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	110.950032547189	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4587749	4619827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861
ES.4183.22	chr11	+	5222	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	88.7084409737878	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4587749	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4616531_4616794_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.23	chr11	+	4790	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.4472659423206	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587749	4635699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4596634_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.24	chr11	+	6681	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	-2	intron_retention	FALSE	canonical	1	2	junction_6	103.5304229512	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587750	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.25	chr11	+	3114	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.077170223783	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587750	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608326_4609271_4609385_4614228_4614309_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.26	chr11	+	3441	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	110.609617574603	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAATGCTCTGTGACATG	NA	False	NA	2	True	AATAAA	-14	NA	4587750	4633379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608730_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.27	chr11	+	5574	17	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_8	111.254336291895	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587750	4633385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4609385_4614228_4614309_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629553_4630082_4631519_4632906
ES.4183.28	chr11	+	6674	18	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	0	intron_retention	FALSE	canonical	2	4	junction_13	75.1094242125203	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587750	4633385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.29	chr11	+	3507	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	99.9311137734389	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587750	4633385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608722_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.3	chr11	+	2689	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-55	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.2176995056174	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTCTGTGACATGCT	NA	False	NA	4	True	AATAAA	-16	NA	4587691	4633381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587809_4590380_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.30	chr11	+	2630	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	72.7156264283669	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTCTGTGACATGCT	NA	False	NA	4	True	AATAAA	-16	NA	4587750	4633381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629442_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.31	chr11	+	4086	9	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	4	15993	4	-15993	5prime_fragment	FALSE	canonical	3	225	junction_8	54.5239339648195	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTGACCATGTTCG	NA	False	NA	NA	False	NA	NA	NA	4587750	4617392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228
ES.4183.32	chr11	+	5008	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	72.9797148607984	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCAGAGTCTCCTGTG	NA	False	NA	11	True	AATAAA	-20	NA	4587750	4635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629200_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.34	chr11	+	6183	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	4	-3537	4	1223	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAAGGAGAAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	4587750	4636922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.35	chr11	+	5166	1	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	6	-40467	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATAATGGGCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	4587752	4592918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4587800_4592900
ES.4183.36	chr11	+	4934	20	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	91.2057125100168	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587760	4635699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629255_4629346_4629442_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.37	chr11	+	5757	17	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_9	78.2587604920369	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587762	4633385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614357_4617115_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4631519_4632906
ES.4183.38	chr11	+	5055	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	87.2063501128215	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587764	4635699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607613_4608207_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.4	chr11	+	803	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	-45	-31953	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGAATTATTTATTTA	NA	False	NA	NA	False	AATAAA	-36	NA	4587701	4601432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
ES.4183.40	chr11	+	2868	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.9775397473696	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587766	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4589287_4589528_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.41	chr11	+	2466	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	92.6253738267393	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587766	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.42	chr11	+	5997	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	20	1027	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	100.957552961628	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGGATTAGTGTGTTC	NA	False	NA	NA	False	AATAAA	-25	NA	4587766	4636726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.43	chr11	+	7442	10	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	24	-13526	intron_retention	FALSE	canonical	1	2	junction_6	102.683740763979	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGACAAGGAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	4587770	4619859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4609385_4614228_4618423_4618579_4618649_4618861
ES.4183.44	chr11	+	4833	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.8045985501857	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4587771	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4596561_4596714_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.45	chr11	+	4770	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	81.5242901014367	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCAGAGTCTCCTGTG	NA	False	NA	11	True	AATAAA	-20	NA	4587771	4635696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.46	chr11	+	4447	17	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	78.8562527244986	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4587777	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618974_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.47	chr11	+	2078	16	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	34	-7244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	81.2569586763702	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTAGAAGACTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	4587780	4626141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4625804
ES.4183.48	chr11	+	4284	19	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.4227250488636	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587782	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4609271_4609385_4614228_4614304_4616531_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.49	chr11	+	3061	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	53	-464	53	464	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCCTCCCAATGTAGAG	NA	False	NA	NA	False	TATAAA	-14	NA	4587799	4633849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.5	chr11	+	5101	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-42	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	87.7034064332737	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGTCTCCTGTGTGTT	NA	False	NA	15	True	AATAAA	-24	NA	4587704	4635700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.50	chr11	+	6453	18	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	2696	-4	intron_retention	FALSE	canonical	2	4	junction_12	74.8141873561278	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTCTGTGACATGCT	NA	False	NA	4	True	AATAAA	-16	NA	4590442	4633381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.51	chr11	+	5189	11	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	27024	4	27024	-4	3prime_fragment	FALSE	canonical	3	211	junction_2	22.961053982777	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGCTCTGTGACATGCT	NA	False	NA	4	True	AATAAA	-16	NA	4614770	4633381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.52	chr11	+	4610	4	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	27127	22341	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	110.406320269972	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTTTGAGTCAAATGG	NA	False	NA	NA	False	NA	NA	NA	4614873	4658040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4618423_4618579_4618649_4618861_4619813_4657999
ES.4183.53	chr11	+	9874	7	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	27915	-2313	27915	-1	intron_retention	FALSE	canonical	3	211	junction_2	22.2217361057942	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4615661	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251
ES.4183.54	chr11	+	5852	11	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	28678	-2313	28678	-1	3prime_fragment	FALSE	canonical	3	211	junction_2	22.961053982777	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGAGTCTCCTGTGTG	NA	False	NA	13	True	AATAAA	-22	NA	4616424	4635698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.55	chr11	+	170	2	Intergenic	novelGene_3207	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_1	0	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTACTG	NA	False	NA	NA	False	NA	NA	NA	4627775	4827157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4627827_4827038
ES.4183.56	chr11	+	890	5	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	41503	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	110.497454721817	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4629249	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632891
ES.4183.57	chr11	+	201	1	Intergenic	novelGene_3210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTAGTTTGCAAAAAT	7713	False	NA	NA	False	NA	NA	NA	4645474	4645675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4645500_4645700
ES.4183.58	chr11	+	176	1	Intergenic	novelGene_3211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4648697	4648873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4648700_4648900
ES.4183.59	chr11	+	173	1	Intergenic	novelGene_3212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4652810	4652983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4652800_4653000
ES.4183.6	chr11	+	4914	19	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-42	6	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	62.2245039264186	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTCCTGTGTGTTTCCTG	NA	False	NA	20	True	AATAAA	-29	NA	4587704	4635705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.60	chr11	+	1303	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-519	1	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCTGTCTCTCTTGC	NA	False	NA	14	True	TATAAA	-17	NA	4654158	4687670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.61	chr11	+	5997	5	ISM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	-54	2	-54	-2	intron_retention	FALSE	canonical	3	156	junction_1	220.514171880176	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCTGGCCTGTCTCTCT	NA	False	NA	11	True	TATAAA	-14	NA	4654623	4687667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066
ES.4183.63	chr11	+	767	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	269.190192986297	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4654670	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672490_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.64	chr11	+	663	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	-5	134	-5	-134	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGAGCTGCCTTCCCTC	NA	False	NA	15	True	AGTAAA	-20	NA	4654672	4687535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.65	chr11	+	796	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	-5	1	-5	-1	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4654672	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.67	chr11	+	653	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-5	-135	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGAGCTGCCTTCCCT	NA	False	NA	14	True	AGTAAA	-19	NA	4654672	4687534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.68	chr11	+	1841	5	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	-5	1046	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	164.774656728515	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACCCAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	4654672	4683569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066
ES.4183.69	chr11	+	769	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	291.453323878799	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4654677	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654722_4672357_4672490_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.7	chr11	+	4813	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	110.991846547393	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587704	4633385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608730_4609271_4609385_4614228_4614357_4617115_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.70	chr11	+	570	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	6	-135	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	265.110844742345	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGAGCTGCCTTCCCT	NA	False	NA	14	True	AGTAAA	-19	NA	4654683	4687534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672429_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.71	chr11	+	2180	1	NIC	ENSMUSG00000009076.11	novel	792	6	NA	NA	6	-25660	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	4654683	4656863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4654700_4656900
ES.4183.72	chr11	+	830	7	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	309.109293867971	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4654683	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4685575_4685621_4687331
ES.4183.73	chr11	+	2106	5	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	6	1322	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	164.774656728515	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTGTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	4654683	4683845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066
ES.4183.74	chr11	+	1296	7	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	307.896492347672	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4654685	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4673240_4673763_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.75	chr11	+	7332	4	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	8	-135	intron_retention	FALSE	canonical	3	287	junction_1	180.051844385629	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGAGCTGCCTTCCCT	NA	False	NA	14	True	AGTAAA	-19	NA	4654685	4687534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4654713_4672357_4672512_4678584_4680268_4682066
ES.4183.76	chr11	+	4234	4	NNC	ENSMUSG00000009076.11	novel	601	3	NA	NA	65	1046	intron_retention	FALSE	canonical	1	1	junction_1	298.833658672439	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACCCAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	4654772	4683569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4655407_4672357_4672512_4678584_4678648_4680186
ES.4183.77	chr11	+	1336	2	Intergenic	novelGene_3213	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTCAATAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	4656569	4659514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4657383_4658991
ES.4183.78	chr11	+	1471	4	ISM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	23029	1	-878	-1	3prime_fragment	FALSE	canonical	3	658	junction_1	20.9284495364563	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	False	NA	12	True	TATAAA	-15	NA	4677706	4687668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4678648_4680186_4680268_4682066_4682179_4687331
ES.4183.79	chr11	+	179	1	Intergenic	novelGene_3214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5180	False	NA	NA	False	NA	NA	NA	4709852	4710031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4709900_4710000
ES.4183.8	chr11	+	3083	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	99.6718992494876	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587708	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607510_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622430_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.80	chr11	+	136	1	Intergenic	novelGene_3215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	4727890	4728026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4727900_4728000
ES.4183.81	chr11	+	165	1	Intergenic	novelGene_3216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATCTTAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4761683	4761848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4761700_4761800
ES.4183.82	chr11	+	1935	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	-3	-6	-3	6	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCTTCATCTACA	NA	False	NA	17	True	ATTAAA	-17	NA	4823947	4844206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.83	chr11	+	1362	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	15	549	15	34	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGAAGTCGTGACAG	NA	False	NA	NA	False	AATAAA	-22	NA	4823965	4843651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.84	chr11	+	2169	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	15	-258	15	258	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	4823965	4844458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.85	chr11	+	1835	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTTGTGGTGTTGTCTT	NA	False	NA	9	True	ATTAAA	-9	NA	4823968	4844198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.86	chr11	+	1561	12	NNC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	-23	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	570.670621880683	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAGTCTGAAGTCGTG	NA	False	NA	NA	False	AATAAA	-18	NA	4823975	4843647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4824288_4824428_4832637_4832712_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.87	chr11	+	1824	10	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	406.149063434098	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823987	4844200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824094_4833422_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.88	chr11	+	1265	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-11	30	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAGTCTGAAGTCGTG	NA	False	NA	NA	False	AATAAA	-18	NA	4823987	4843647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.89	chr11	+	1859	11	NNC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	584.55350482227	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTTGTGGTGTTGTCTT	NA	False	NA	9	True	ATTAAA	-9	NA	4823992	4844198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4833422_4833496_4833725_4833772_4834021_4834117_4838326_4838359_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.9	chr11	+	2780	21	NNC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	87.7034064332737	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	False	NA	6	True	AATAAA	-18	NA	4587708	4633383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4607881_4607976_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ES.4183.90	chr11	+	2150	11	FSM	ENSMUSG00000034285.16	ENSMUST00000136552.8	1566	11	-4	-580	-4	-3	multi-exon	FALSE	canonical	0	0	junction_1	513.053808094239	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACGTTGTGGTGTTGTCT	NA	False	NA	8	True	ATTAAA	-8	NA	4823994	4844197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4824104_4832900_4833172_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.91	chr11	+	1796	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	422.186792190376	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTGTGGTGTTGTCTTC	NA	False	NA	10	True	ATTAAA	-10	NA	4823995	4844199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4843119
ES.4183.92	chr11	+	7018	8	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_4	577.600914409362	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823997	4844200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4836206_4836387_4838037_4838246_4839987_4841402_4841487_4843119
ES.4183.93	chr11	+	2129	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1103	junction_5	72.4740255194922	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823997	4844200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4824104_4833367_4833496_4833725_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.94	chr11	+	4313	29	Fusion	ENSMUSG00000034274.12_ENSMUSG00000034285.16	novel	1566	11	NA	NA	-1	0	multi-exon	TRUE	canonical	0	0	junction_10	472.10412095258	658	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	4823997	4878865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119_4844436_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.95	chr11	+	1628	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	47	251	-1	-251	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCTCTTCTGTACTTC	NA	False	NA	NA	False	NA	NA	NA	4823997	4843949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4183.96	chr11	+	2998	28	Fusion	ENSMUSG00000034274.12_ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	0	multi-exon	FALSE	canonical	1	4	junction_9	459.630817439597	658	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	23	True	ATTAAA	-20	NA	4823998	4878867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ES.4183.97	chr11	+	1826	10	NNC	ENSMUSG00000034285.16	novel	1566	11	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	400.56981019481	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTGTTGTCTTCATCT	NA	False	NA	14	True	ATTAAA	-14	NA	4823998	4844203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4824104_4833422_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ES.4184.1	chr11	-	178	1	Intergenic	novelGene_3206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACTGAGTCTCACTA	NA	False	NA	NA	False	NA	NA	NA	4598570	4598392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4598400_4598600
ES.4185.1	chr11	-	1690	2	Intergenic	novelGene_3208	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTGAAAGTTATCTTC	NA	False	NA	NA	False	NA	NA	NA	4644757	4639939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4641526_4644653
ES.4185.2	chr11	-	1554	2	Intergenic	novelGene_3209	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCTTGAAAGTTATCTT	NA	False	NA	NA	False	NA	NA	NA	4644794	4639940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4641354_4644653
ES.4186.1	chr11	-	683	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-1	-172	-1	170	multi-exon	FALSE	canonical	3	506	junction_1	31	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCCCAGTCTTTTGTT	NA	False	NA	NA	False	AATAGA	-16	NA	4654335	4651802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4652221_4653903_4653990_4654156
ES.4186.2	chr11	-	606	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	-2	-170	-2	170	multi-exon	FALSE	canonical	3	8152	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCCCAGTCTTTTGTT	NA	False	NA	NA	False	AATAGA	-16	NA	4654344	4651802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4652221_4654156
ES.4186.3	chr11	-	462	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	-22	-6	-22	6	multi-exon	FALSE	canonical	3	8152	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACGAGTCCTTTATTA	NA	False	NA	0	True	AATAAA	-25	NA	4654364	4651966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4652221_4654156
ES.4186.4	chr11	-	526	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	-11	-5	-3	3	multi-exon	FALSE	canonical	3	506	junction_1	31	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCACGAGTCCTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	4654345	4651969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4652221_4653903_4653990_4654156
ES.4186.6	chr11	-	483	2	NNC	ENSMUSG00000059534.9	novel	434	2	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTTTTGCACGAGTCC	NA	False	NA	-7	True	AATAAA	-18	NA	4654336	4651973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4652221_4654100
ES.4186.7	chr11	-	365	3	NNC	ENSMUSG00000059534.9	novel	510	3	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4076	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTTTGCACGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	4654319	4651975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4652221_4654156_4654186_4654228
ES.4186.8	chr11	-	2360	1	NIC	ENSMUSG00000059534.9	novel	434	2	NA	NA	-1	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTTTGCACGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	4654335	4651975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4652000_4654300
ES.4187.1	chr11	-	3060	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	-432	0	-432	0	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGCCCTGGTTCTGTCT	7132	False	NA	3	True	NA	NA	NA	4697210	4686891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
ES.4187.2	chr11	-	3648	4	NIC	ENSMUSG00000009075.3	novel	2628	5	NA	NA	-346	-28	intron_retention	FALSE	canonical	3	29	junction_1	4.64279609239471	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCCTGGAAGTTA	7218	False	NA	-25	True	NA	NA	NA	4697124	4686919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4688949_4689123_4689278_4689553_4690513_4696618
ES.4188.1	chr11	-	4596	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	47	1	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	87.5255899088312	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTCGAGTTTTTTTTTTT	8892	False	NA	-7	True	AATAAA	-22	NA	4799489	4715843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ES.4188.10	chr11	-	4721	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	56	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	87.8527710149202	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGTCGAGTTTTTTT	8901	False	NA	-11	True	AATAAA	-18	NA	4799480	4715847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730562_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.11	chr11	-	4127	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	92.974437851218	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8845	False	NA	-12	True	AATAAA	-17	NA	4799536	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4799505
ES.4188.12	chr11	-	3674	11	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	12065	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	111.696911327037	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	NA	False	NA	-12	True	AATAAA	-17	NA	4753175	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753036
ES.4188.13	chr11	-	2160	12	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.322058695688	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8975	False	NA	-12	True	AATAAA	-17	NA	4799406	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716524_4741148_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.14	chr11	-	3726	12	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	11178	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	107.720406378797	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	NA	False	NA	-12	True	AATAAA	-17	NA	4754062	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4753947
ES.4188.15	chr11	-	4038	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-23	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	140.537476219769	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	NA	False	NA	-12	True	AATAAA	-17	NA	4770419	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4758695_4758835_4766081_4766166_4770367
ES.4188.16	chr11	-	3212	7	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	167.392502818973	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8836	False	NA	-12	True	AATAAA	-17	NA	4799545	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4732186_4732353_4734435_4734480_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.20	chr11	-	4554	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-50	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	106.839376372899	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTCGTCGAGTTTTTT	8966	False	NA	-12	True	AATAAA	-17	NA	4799415	4715848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799121_4799161
ES.4188.21	chr11	-	4385	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.839376372899	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	9045	False	NA	-14	True	AATAAA	-15	NA	4799336	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4717654_4717782_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.22	chr11	-	4519	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-59	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	94.9279024663806	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	8957	False	NA	-14	True	AATAAA	-15	NA	4799424	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.23	chr11	-	4271	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	113.025145847064	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	8852	False	NA	-14	True	AATAAA	-15	NA	4799529	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.24	chr11	-	4422	15	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	79	-6	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	112.792929290622	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	8924	False	NA	-14	True	AATAAA	-15	NA	4799457	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ES.4188.25	chr11	-	3737	12	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	11043	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	107.720406378797	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	NA	False	NA	-14	True	AATAAA	-15	NA	4754197	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4754069
ES.4188.26	chr11	-	2668	15	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-51	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.238675453589	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	8965	False	NA	-14	True	AATAAA	-15	NA	4799416	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716524_4734445_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.27	chr11	-	4161	14	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	63	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	100.357172788882	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	8908	False	NA	-14	True	AATAAA	-15	NA	4799473	4715850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732319_4741139_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.28	chr11	-	2709	15	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-52	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.238675453589	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8964	False	NA	-15	True	AATAAA	-14	NA	4799417	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716555_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.31	chr11	-	3024	18	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	90.2715626169229	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	9030	False	NA	-15	True	AATAAA	-14	NA	4799351	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716529_4718077_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.32	chr11	-	4297	13	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	83	-7	combination_of_known_splicesites	FALSE	canonical	2	12	junction_12	118.921163194595	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8928	False	NA	-15	True	AATAAA	-14	NA	4799453	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4798871
ES.4188.33	chr11	-	4378	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	106.839376372899	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8834	False	NA	-15	True	AATAAA	-14	NA	4799547	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.35	chr11	-	6780	1	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	12476	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	NA	False	NA	-15	True	AATAAA	-14	NA	4722631	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4715900_4722600
ES.4188.36	chr11	-	4259	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	92.974437851218	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	9371	False	NA	-15	True	AATAAA	-14	NA	4799010	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798844
ES.4188.37	chr11	-	2502	18	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-50	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.2715626169229	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8966	False	NA	-15	True	AATAAA	-14	NA	4799415	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716085_4718219_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.41	chr11	-	4484	15	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-56	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	96.9715927265215	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8960	False	NA	-15	True	AATAAA	-14	NA	4799421	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.42	chr11	-	4510	16	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	108.323261070229	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	9030	False	NA	-15	True	AATAAA	-14	NA	4799351	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756319_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.43	chr11	-	4834	18	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	63	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	117.464652711691	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8908	False	NA	-15	True	AATAAA	-14	NA	4799473	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4758695_4758835_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.45	chr11	-	4345	14	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-52	-7	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	115.36799880352	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8964	False	NA	-15	True	AATAAA	-14	NA	4799417	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4798871
ES.4188.46	chr11	-	4699	17	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-18	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	130.630068681564	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTTTCGTCGAGTTT	8998	False	NA	-15	True	AATAAA	-14	NA	4799383	4715851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4758695_4758835_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.48	chr11	-	4500	18	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-77	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	90.2715626169229	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTCTTTCGTCGAGTT	8939	False	NA	-16	True	AATAAA	-13	NA	4799442	4715852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799203_4799365
ES.4188.5	chr11	-	4448	18	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-29	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	90.2715626169229	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	8816	False	NA	-8	True	AATAAA	-21	NA	4799565	4715844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.51	chr11	-	2136	12	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-53	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.322058695688	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	8963	False	NA	-17	True	AATAAA	-12	NA	4799418	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716524_4741179_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.52	chr11	-	4179	14	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-68	-9	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	128.241451264734	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	9119	False	NA	-17	True	AATAAA	-12	NA	4799262	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ES.4188.53	chr11	-	3908	15	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	48	-9	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	96.6481098773129	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	9444	False	NA	-17	True	AATAAA	-12	NA	4798937	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4798871
ES.4188.54	chr11	-	4738	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	92.64777048046	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	9028	False	NA	-17	True	AATAAA	-12	NA	4799353	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4745083_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.55	chr11	-	2071	13	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	8965	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.650152757566	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	NA	False	NA	-17	True	AATAAA	-12	NA	4756275	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4716521_4718077_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253
ES.4188.56	chr11	-	3549	10	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	12050	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	116.845999736067	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	NA	False	NA	-17	True	AATAAA	-12	NA	4753190	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753036
ES.4188.57	chr11	-	3612	10	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	12077	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	134.103976612216	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	NA	False	NA	-17	True	AATAAA	-12	NA	4753163	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753036
ES.4188.58	chr11	-	4486	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-24	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	94.7273045231533	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATAGTCTTTCGTCGAGT	8992	False	NA	-17	True	AATAAA	-12	NA	4799389	4715853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.59	chr11	-	4231	12	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	-82	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	107.485689995083	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATAGTCTTTCGTCGAG	8934	False	NA	-18	True	AATAAA	-11	NA	4799447	4715854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4770367_4770494_4798871
ES.4188.6	chr11	-	4517	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	66	-2	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	100.950306020905	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTCGAGTTTTTTTT	8911	False	NA	-10	True	AATAAA	-19	NA	4799470	4715846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.60	chr11	-	3223	13	NNC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-40	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.666776315742	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATAGTCTTTCGTCGAG	8976	False	NA	-18	True	AATAAA	-11	NA	4799405	4715854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4717408_4737504_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.61	chr11	-	3827	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-468	-965	83	-855	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGCTTTATATCTCAAAT	8928	False	NA	NA	False	TATAAA	-36	NA	4799453	4716699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.63	chr11	-	3403	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	5	-876	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	113.025145847064	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGGCTTTTTCATTTA	8850	False	NA	NA	False	TATAAA	-15	NA	4799531	4716720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.64	chr11	-	3756	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	87	877	-84	-877	multi-exon	FALSE	canonical	3	105	junction_1	67.5504749551524	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGCTTTTTCATTT	8932	False	NA	NA	False	TATAAA	-14	NA	4799449	4716721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.65	chr11	-	2331	18	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	90.2715626169229	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGCCATCCTTCCTGC	8845	False	NA	NA	False	TATAAA	-14	NA	4799536	4717932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799160_4799505
ES.4188.66	chr11	-	2344	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-352	402	28	-114	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTAGTTCTCCTTGCCT	9044	False	NA	NA	False	NA	NA	NA	4799337	4718066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.67	chr11	-	2319	18	NNC	ENSMUSG00000009073.17	novel	2470	17	NA	NA	70	-211	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	117.625998114898	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCTTTTGTTCA	8915	False	NA	NA	False	NA	NA	NA	4799466	4722544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4722639_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871_4799121_4799161
ES.4188.68	chr11	-	3024	17	NIC	ENSMUSG00000009073.17	novel	1795	16	NA	NA	0	638	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	88.7967306549064	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTATTGTTTCTAGA	9016	False	NA	NA	False	TATAAA	-24	NA	4799365	4729175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4730035_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.69	chr11	-	2551	17	NNC	ENSMUSG00000009073.17	novel	1795	16	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.2136353330249	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCCAGGCAATACAGGA	8901	False	NA	NA	False	ATTAAA	-23	NA	4799480	4729813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4730070_4730562_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.7	chr11	-	4534	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	61	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	106.290514484538	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTCGAGTTTTTTTT	8906	False	NA	-10	True	AATAAA	-19	NA	4799475	4715846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ES.4188.70	chr11	-	2445	17	NNC	ENSMUSG00000009073.17	novel	1795	16	NA	NA	-46	-2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	89.9774060181221	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCCCAGGCAATACAG	8970	False	NA	NA	False	ATTAAA	-21	NA	4799411	4729815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4730035_4730562_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.71	chr11	-	2455	16	NNC	ENSMUSG00000009073.17	novel	2012	15	NA	NA	-59	974	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.0863398499837	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCCAGCCTGTGTTA	8957	False	NA	NA	False	NA	NA	NA	4799424	4730962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4731239_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.72	chr11	-	2464	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-100	9609	71	-6	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGGGGACTTATGC	8916	False	NA	NA	False	AATAAA	-15	NA	4799465	4731942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.73	chr11	-	2187	15	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-60	9846	-60	-243	5prime_fragment	FALSE	canonical	3	334	junction_11	18.239338512889	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAGGTTGGCATCTA	8956	False	NA	NA	False	ATTAAA	-11	NA	4799425	4732179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.74	chr11	-	4485	13	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-46	12497	-46	-395	5prime_fragment	FALSE	canonical	3	334	junction_9	18.8126730335342	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTGATCTGCTTAGA	8970	False	NA	NA	False	NA	NA	NA	4799411	4734830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.75	chr11	-	3441	13	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-101	13596	70	-1494	5prime_fragment	FALSE	canonical	3	334	junction_9	18.8126730335342	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCCAGCTCTGAGAATA	8915	False	NA	NA	False	NA	NA	NA	4799466	4735929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.76	chr11	-	2715	13	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	28	14193	28	-2091	5prime_fragment	FALSE	canonical	3	334	junction_9	18.8126730335342	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGATGGTCACAGTCAG	9044	False	NA	NA	False	ATTAAA	-20	NA	4799337	4736526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.77	chr11	-	2241	8	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	-52	1130	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	126.56433388694	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAGTTAAAAAAA	8964	False	NA	NA	False	NA	NA	NA	4799417	4740070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4798871
ES.4188.78	chr11	-	1575	5	NNC	ENSMUSG00000009073.17	novel	2012	15	NA	NA	12096	1130	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	158.59776164877	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4753144	4740070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753036
ES.4188.79	chr11	-	2574	11	ISM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	-56	17741	-56	1126	5prime_fragment	FALSE	canonical	3	334	junction_7	18.1683791241817	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATAAAAATAAAAGTTAAA	8960	False	NA	NA	False	NA	NA	NA	4799421	4740074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ES.4188.80	chr11	-	178	1	Intergenic	novelGene_3217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTTTTTTTA	3337	False	NA	NA	False	NA	NA	NA	4786501	4786323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4786300_4786500
ES.4188.81	chr11	-	171	1	Intergenic	novelGene_3218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTTTA	8287	False	NA	NA	False	NA	NA	NA	4795726	4795555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4795600_4795700
ES.4189.1	chr11	-	158	1	Intergenic	novelGene_3219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATTAAAAAAAAACAAA	4134	False	NA	NA	False	NA	NA	NA	4804247	4804089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4804100_4804200
ES.419.1	chr1	+	179	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46922012	46922191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_46922000_46922200
ES.4190.1	chr11	-	244	1	Intergenic	novelGene_3220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAAAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	4819677	4819433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4819400_4819700
ES.4191.1	chr11	-	2496	6	Antisense	novelGene_ENSMUSG00000098296.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACGAAAGGAGGAATTAA	5293	False	NA	NA	False	NA	NA	NA	4844116	4837741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4838035_4838242_4839236_4839530_4839562_4839888_4839985_4841400_4841485_4843117
ES.4191.2	chr11	-	6145	2	Antisense	novelGene_ENSMUSG00000098296.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5293	False	NA	NA	False	NA	NA	NA	4844116	4837763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4838035_4838242
ES.4191.3	chr11	-	1584	1	Antisense	novelGene_ENSMUSG00000098296.3_AS_novelGene_ENSMUSG00000034285.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAGTGGGAAAAGAG	6650	False	NA	NA	False	NA	NA	NA	4842759	4841175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_4841200_4842800
ES.4192.1	chr11	-	203	1	Intergenic	novelGene_3222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCACATGTGTAAGACA	NA	False	NA	NA	False	AAAACA	-5	NA	4853683	4853480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4853500_4853700
ES.4193.1	chr11	-	231	1	Intergenic	novelGene_3223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4857185	4856954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4857000_4857200
ES.4194.1	chr11	-	175	1	Intergenic	novelGene_3224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTCACCCAGCTG	NA	False	NA	NA	False	NA	NA	NA	4858588	4858413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4858400_4858600
ES.4195.1	chr11	+	3111	4	Antisense	novelGene_ENSMUSG00000020396.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	2.16024689946929	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATAATTTTCTGAC	520	False	NA	NA	False	NA	NA	NA	4883724	4894525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_4883884_4884452_4887122_4893948_4894032_4894325
ES.4195.2	chr11	+	3297	4	Antisense	novelGene_ENSMUSG00000020396.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_3	1.69967317119759	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGAAAATAATTTTCTG	520	False	NA	NA	False	NA	NA	NA	4883724	4894523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_4883884_4884452_4887122_4893760_4894032_4894325
ES.4195.3	chr11	+	3199	3	Antisense	novelGene_ENSMUSG00000020396.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCACTGACTTATTTTA	661	False	NA	NA	False	AATATA	-14	NA	4883865	4893062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_4883884_4884452_4887122_4892550
ES.4196.1	chr11	-	174	1	Intergenic	novelGene_3225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTAC	NA	False	NA	NA	False	NA	NA	NA	4885813	4885639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4885600_4885800
ES.4197.1	chr11	-	4708	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	893	-1607	893	1607	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCGTGTCTAACACGAG	NA	False	NA	NA	False	AATAAA	-19	NA	4897171	4887146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
ES.4197.2	chr11	-	3991	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	3	0	3	0	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	4898061	4888753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
ES.4197.3	chr11	-	3328	4	NNC	ENSMUSG00000020396.9	novel	3994	4	NA	NA	985	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.8149218578274	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	4897079	4888753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4891416_4893850_4893976_4895110_4895311_4896738
ES.4197.4	chr11	-	3288	4	NNC	ENSMUSG00000020396.9	novel	3994	4	NA	NA	157	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.8149218578274	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAACTGTGGTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	4897907	4888761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_4891416_4893850_4893976_4895110_4895311_4897598
ES.4198.1	chr11	+	3981	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	42	62	42	0	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGGCCAGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	4936865	4992729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.11	chr11	+	3727	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-2	-147	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	68.7692355361952	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACATTTCTTCCCTCTAC	NA	False	NA	23	True	AATAAA	-23	NA	4936909	4992582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.13	chr11	+	3767	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-2	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.0619387029197	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936909	4992579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965746_4966629_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.14	chr11	+	3447	20	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	2	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.4804621893003	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936913	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962960_4966775_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.15	chr11	+	3765	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	68.0373978044428	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936916	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981064_4981645_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.17	chr11	+	3531	19	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.8850791383098	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936916	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4936986_4965617_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.18	chr11	+	3316	19	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	-152	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	71.1658643375711	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936916	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.2	chr11	+	3816	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	77	192	-11	-130	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAACTGCTTCTGGTAAC	NA	False	NA	40	True	AATAAA	-40	NA	4936900	4992599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.20	chr11	+	4644	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	-150	intron_retention	FALSE	canonical	3	239	junction_6	28.2306487542506	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936916	4992579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.21	chr11	+	3924	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	68.1291971184161	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGGCCAGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	4936916	4992729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980967_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.22	chr11	+	3940	22	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	5	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.3104035952401	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936916	4992579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4952967_4953128_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.23	chr11	+	3819	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-11	-156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	67.724349387794	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAATCATGCACATTTCT	NA	False	NA	14	True	AATAAA	-14	NA	4936922	4992573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973045_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.24	chr11	+	3280	19	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-11	-156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	71.2944901166118	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAATCATGCACATTTCT	NA	False	NA	14	True	AATAAA	-14	NA	4936922	4992573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962958_4968091_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.26	chr11	+	4291	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-9	-150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.0619387029197	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936924	4992579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966086_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.27	chr11	+	3856	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-9	-152	intron_retention	FALSE	canonical	3	239	junction_7	27.887089319119	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936924	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990422_4991717
ES.4198.28	chr11	+	3917	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.0619387029197	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTTCCTGGCCAGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	4936924	4992726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965736_4966601_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.29	chr11	+	3718	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-7	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	68.1375630617943	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936926	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990316_4990422_4991717
ES.4198.31	chr11	+	4771	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	2	-4	intron_retention	FALSE	canonical	3	239	junction_6	28.2306487542506	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTTCCTGGCCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	4936935	4992725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.33	chr11	+	3754	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	3	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	68.0373978044428	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936936	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981064_4981636_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.36	chr11	+	3606	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	26	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	65.1735183951273	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936959	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991846
ES.4198.37	chr11	+	3716	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	29	-152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.1813962343743	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936962	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975694_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.39	chr11	+	3756	21	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	37	-150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.6491685093025	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936970	4992579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937082_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.40	chr11	+	4422	22	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	69	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	102.72769632303	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCATGCACATTTCTTCC	NA	False	NA	17	True	AATAAA	-17	NA	4937002	4992576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4952967_4953128_4958952_4959593_4962881_4962988_4965605_4965736_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.41	chr11	+	3739	21	NNC	ENSMUSG00000009090.18	novel	3735	21	NA	NA	225	-156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.6491685093025	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAATCATGCACATTTCT	NA	False	NA	14	True	AATAAA	-14	NA	4937158	4992573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937259_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.42	chr11	+	2903	15	ISM	ENSMUSG00000009090.18	ENSMUST00000109897.8	3942	21	32455	152	9749	-152	3prime_fragment	FALSE	canonical	3	239	junction_1	29.915186232864	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4969278	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.43	chr11	+	1624	7	ISM	ENSMUSG00000009090.18	ENSMUST00000101613.3	3735	21	24152	152	2705	-152	3prime_fragment	FALSE	canonical	3	257	junction_4	32.8857449698532	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4983681	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.44	chr11	+	6329	4	ISM	ENSMUSG00000009090.18	ENSMUST00000142325.8	847	5	-3221	-2175	3171	-152	intron_retention	FALSE	canonical	3	257	junction_3	22.5289936649544	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4984147	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_4987778_4989124_4989255_4989518_4989604_4990093
ES.4198.6	chr11	+	3633	20	NNC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-7	-152	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.8378976565959	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGCACATTTCTTCCC	NA	False	NA	18	True	AATAAA	-18	NA	4936904	4992577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965741_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ES.4198.8	chr11	+	3697	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	-2	-155	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	69.5560118261781	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATCATGCACATTTCTT	NA	False	NA	15	True	AATAAA	-15	NA	4936909	4992574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4990093_4990181_4990266_4990422_4991717
ES.4199.1	chr11	-	6316	1	Intergenic	novelGene_3226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	4953661	4947345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4947300_4953700
ES.42.1	chr1	+	178	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATAGATATTCAAA	NA	False	NA	NA	False	NA	NA	NA	7067204	7067382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7067200_7067400
ES.420.1	chr1	-	172	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAACTATCA	NA	False	NA	NA	False	NA	NA	NA	47065402	47065230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_47065200_47065400
ES.4200.1	chr11	-	3047	1	Intergenic	novelGene_3227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCCATAAAAGTTCTCC	NA	False	NA	NA	False	NA	NA	NA	4957700	4954653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_4954700_4957700
ES.4201.1	chr11	+	177	1	Intergenic	novelGene_3228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCCCATC	8653	False	NA	NA	False	NA	NA	NA	4995610	4995787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_4995600_4995800
ES.4202.1	chr11	+	1210	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	-102	2	-102	-2	multi-exon	FALSE	canonical	3	9	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTAAGGGTTTCTTGT	NA	False	NA	NA	False	AATAAA	-25	NA	5008025	5010383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5008525_5009432_5009558_5009797
ES.4203.1	chr11	-	2553	2	NNC	ENSMUSG00000034201.14	novel	3571	5	NA	NA	7805	1925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5007046	5002206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5002836_5005122
ES.4203.10	chr11	-	3526	5	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	12	-4	intron_retention	FALSE	canonical	3	54	junction_4	51.0759238780857	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTGCATTTGTTTTTA	NA	False	NA	-4	True	AAGAAA	-21	NA	5015315	5010375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.11	chr11	-	2639	8	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.2666817323167	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTGCATTTGTTTTTA	NA	False	NA	-4	True	AAGAAA	-21	NA	5015312	5010375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011383_5011489_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015013_5015214
ES.4203.12	chr11	-	2905	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-12	3	intron_retention	FALSE	canonical	3	85	junction_4	39.0600499231632	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGCATTTGTTTT	NA	False	NA	-6	True	AAGAAA	-19	NA	5015312	5010377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.13	chr11	-	2660	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	11	3	intron_retention	FALSE	canonical	3	85	junction_4	32.148094811357	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGCATTTGTTTT	NA	False	NA	-6	True	AAGAAA	-19	NA	5015316	5010377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.14	chr11	-	3644	4	ISM	ENSMUSG00000034201.14	ENSMUST00000156196.2	2730	5	-464	-92	12	3	intron_retention	FALSE	canonical	3	136	junction_2	22.939534045447	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGCATTTGTTTT	NA	False	NA	-6	True	AAGAAA	-19	NA	5015315	5010377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825
ES.4203.15	chr11	-	3101	6	NNC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-12	2	intron_retention	FALSE	canonical	2	6	junction_5	65.5756052202342	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTTTGCATTTGTTT	NA	False	NA	-7	True	AAGAAA	-18	NA	5015312	5010378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015013_5015214
ES.4203.16	chr11	-	3542	3	ISM	ENSMUSG00000034201.14	ENSMUST00000122886.8	3571	5	-19	6249	-13	0	intron_retention	FALSE	canonical	3	6	junction_1	77	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTTTTTGCATTTGT	NA	False	NA	-9	True	AAGAAA	-16	NA	5015313	5010380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5012327_5012593_5012702_5013825
ES.4203.17	chr11	-	3431	5	NNC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-8	-1	intron_retention	FALSE	canonical	2	6	junction_4	70.6876934126443	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTTTTTGCATTTG	NA	False	NA	-10	True	AAGAAA	-15	NA	5015308	5010381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5015013_5015214
ES.4203.19	chr11	-	2985	7	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-13	-2	intron_retention	FALSE	canonical	0	0	junction_1	68.2945011614324	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACAGTTTTTGCATTT	NA	False	NA	-11	True	AAGAAA	-14	NA	5015313	5010382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011295_5011489_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.2	chr11	-	3581	7	NNC	ENSMUSG00000034201.14	novel	2686	7	NA	NA	-7	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	73.838600263608	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	5015334	5004130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5004686_5004813_5006690_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.20	chr11	-	2517	6	NNC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	61.5317804065509	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACAGTTTTTGCATTT	NA	False	NA	-11	True	AAGAAA	-14	NA	5015286	5010382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011818_5012154_5012307_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.21	chr11	-	3056	5	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	6	junction_2	68.9179766098802	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACAGTTTTTGCATTT	NA	False	NA	-11	True	AAGAAA	-14	NA	5015286	5010382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825_5015095_5015214
ES.4203.22	chr11	-	2280	7	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.3005097612418	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGGATTCTAGAGTTA	NA	False	NA	16	True	AGTAAA	-45	NA	5015312	5010470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011295_5011489_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.23	chr11	-	2493	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	-57	94	-7	-5	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTGGGATTCTAGA	NA	False	NA	12	True	AGTAAA	-41	NA	5015334	5010474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.24	chr11	-	2961	6	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	0	-18	intron_retention	FALSE	canonical	2	5	junction_5	65.9605942968982	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGCCTTCATTATATG	NA	False	NA	-1	True	AGTAAA	-28	NA	5015278	5010487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015016_5015214
ES.4203.25	chr11	-	2362	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	12	-20	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	65.3241915372858	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTGAGCCTTCATTATA	NA	False	NA	-3	True	AGTAAA	-26	NA	5015315	5010489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825_5014479_5015214
ES.4203.26	chr11	-	3102	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-19	-24	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGACTGAGCCTTCAT	NA	False	NA	-7	True	AGTAAA	-22	NA	5015346	5010493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.27	chr11	-	3298	5	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-12	-24	intron_retention	FALSE	canonical	0	0	junction_1	64.0058591068037	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGACTGAGCCTTCAT	NA	False	NA	-7	True	AGTAAA	-22	NA	5015312	5010493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011295_5011489_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.28	chr11	-	2803	5	NIC	ENSMUSG00000034201.14	novel	2530	6	NA	NA	1	-24	intron_retention	FALSE	canonical	3	85	junction_4	39.0600499231632	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGACTGAGCCTTCAT	NA	False	NA	-7	True	AGTAAA	-22	NA	5015326	5010493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.29	chr11	-	2873	7	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-13	-25	intron_retention	FALSE	canonical	0	0	junction_1	68.2945011614324	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGGACTGAGCCTTCA	NA	False	NA	-8	True	AGTAAA	-21	NA	5015313	5010494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011295_5011489_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.3	chr11	-	3666	6	NIC	ENSMUSG00000034201.14	novel	2686	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	65.7498288971158	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	5015293	5004132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5006690_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.30	chr11	-	3035	6	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-12	-29	intron_retention	FALSE	canonical	0	0	junction_1	65.487708770425	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGGACTGAGCC	NA	False	NA	-12	True	AGTAAA	-17	NA	5015312	5010498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011383_5011498_5011818_5012154_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.31	chr11	-	2968	7	NNC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	0	-32	intron_retention	FALSE	canonical	0	0	junction_1	68.2945011614324	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTTTTGGGGACTGA	NA	False	NA	-15	True	AGTAAA	-14	NA	5015327	5010501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5011383_5011489_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.4	chr11	-	5326	3	NIC	ENSMUSG00000034201.14	novel	2730	5	NA	NA	3	1629	intron_retention	FALSE	canonical	3	136	junction_1	12	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-4	NA	5015274	5008742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5012512_5012593_5012702_5013825
ES.4203.5	chr11	-	5281	4	ISM	ENSMUSG00000034201.14	ENSMUST00000156196.2	2730	5	-466	-1727	10	1629	intron_retention	FALSE	canonical	3	136	junction_2	22.939534045447	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-4	NA	5015317	5008742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825
ES.4203.6	chr11	-	3187	4	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	6	junction_2	74.3011888644231	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015286	5010371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825
ES.4203.7	chr11	-	3198	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	7	0	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015320	5010371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
ES.4203.8	chr11	-	2593	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	-54	-9	-4	0	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015331	5010371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ES.4203.9	chr11	-	2837	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	7	3	7	-3	multi-exon	FALSE	canonical	3	21	junction_5	62.4357447478784	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCATTTGTTTTTAT	NA	False	NA	-3	True	AAGAAA	-22	NA	5015320	5010374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
ES.4204.1	chr11	+	1825	1	Antisense	novelGene_ENSMUSG00000009079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAGTGCTCCTCAGTAC	9486	False	NA	NA	False	NA	NA	NA	5022176	5024001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5022200_5024000
ES.4205.1	chr11	+	173	1	Intergenic	novelGene_3229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5026543	5026716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5026500_5026700
ES.4206.1	chr11	+	179	1	Intergenic	novelGene_3230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	5027568	5027747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5027600_5027700
ES.4207.1	chr11	+	8871	4	Antisense	novelGene_ENSMUSG00000009079.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAACAAGGACAGGAGTAT	NA	False	NA	NA	False	NA	NA	NA	5030643	5045060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5038145_5041856_5041982_5043679_5043733_5043868
ES.4207.10	chr11	+	1952	10	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-47	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	84.3721913112766	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTGGTCTCCTGAGTG	NA	False	NA	14	True	AATAAA	-15	NA	5049385	5056089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050396_5050588_5051335_5051417_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.11	chr11	+	2035	7	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	465	0	-42	0	intron_retention	FALSE	canonical	3	72	junction_2	56.6862711186168	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049390	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
ES.4207.12	chr11	+	1948	8	ISM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	467	0	-40	0	intron_retention	FALSE	canonical	3	72	junction_2	52.4917875014944	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049392	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
ES.4207.13	chr11	+	1800	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	-10	0	-4	0	multi-exon	FALSE	canonical	3	31	junction_6	83.1500901983876	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049428	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
ES.4207.14	chr11	+	2680	6	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	20	junction_2	76.5647438446704	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049428	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5054405_5055184
ES.4207.15	chr11	+	2016	7	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-4	5	intron_retention	FALSE	canonical	3	20	junction_2	73.0722625594388	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGTCAGTTGTC	NA	False	NA	23	True	AATAAA	-24	NA	5049428	5056098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
ES.4207.16	chr11	+	1836	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	65.8649185834159	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGTCTCCTGAGTGT	NA	False	NA	15	True	AATAAA	-16	NA	5049433	5056090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.17	chr11	+	5395	2	NIC	ENSMUSG00000034175.14	novel	1611	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	225	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049441	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5051906_5053160
ES.4207.18	chr11	+	1605	8	NNC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.110443151672	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049445	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055470_5055718_5055806
ES.4207.19	chr11	+	2849	1	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-16	-946	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGTAGAACACAAAATAG	NA	False	NA	NA	False	NA	NA	NA	5049459	5052308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049500_5052300
ES.4207.2	chr11	+	1568	1	Antisense	novelGene_ENSMUSG00000009079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAAAATTAGATAAAAG	NA	False	NA	NA	False	NA	NA	NA	5030643	5032211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5030600_5032200
ES.4207.20	chr11	+	2545	8	NIC	ENSMUSG00000034175.14	novel	1790	9	NA	NA	-16	0	intron_retention	FALSE	canonical	3	31	junction_6	76.0864170344672	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049459	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5055314_5055432_5055718_5055799
ES.4207.21	chr11	+	1790	9	NNC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	75.5028972954019	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049461	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055806
ES.4207.22	chr11	+	1636	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.427218602587	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTGGTCTCCTGAGTG	NA	False	NA	14	True	AATAAA	-15	NA	5049469	5056089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.23	chr11	+	1867	7	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	13	0	intron_retention	FALSE	canonical	3	31	junction_6	77.7147562135617	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049620	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055314_5055432
ES.4207.24	chr11	+	1813	8	NNC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	83.7798378160867	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049633	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055177_5055348_5055432_5055718_5055799
ES.4207.25	chr11	+	1964	6	ISM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	215	-7	46	5	intron_retention	FALSE	canonical	3	31	junction_5	85.0726748139495	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGTCAGTTGTC	NA	False	NA	23	True	AATAAA	-24	NA	5049653	5056098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180
ES.4207.26	chr11	+	1654	8	NIC	ENSMUSG00000034175.14	novel	1611	8	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	75.427218602587	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050125	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5050227_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.27	chr11	+	1627	8	FSM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	-16	0	-16	0	multi-exon	FALSE	canonical	3	5	junction_1	73.7707424998528	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050140	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.28	chr11	+	1709	7	ISM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	-16	0	-16	0	intron_retention	FALSE	canonical	3	5	junction_1	77.2673928640018	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050140	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432
ES.4207.29	chr11	+	1635	8	NNC	ENSMUSG00000034175.14	novel	1611	8	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.7036093346611	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050145	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055786
ES.4207.3	chr11	+	2601	8	NNC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-18278	-1464	intron_retention	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAACGTCCGTCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	5030647	5049043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5032432_5033357_5033572_5035895_5036064_5037959_5038145_5041856_5041982_5043679_5043733_5043868_5043906_5049008
ES.4207.30	chr11	+	1787	6	FSM	ENSMUSG00000034175.14	ENSMUST00000148761.8	902	6	-22	-863	-9	0	multi-exon	FALSE	canonical	3	5	junction_1	84.5624029932925	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5050147	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184
ES.4207.4	chr11	+	176	1	Intergenic	novelGene_3231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5396	False	NA	NA	False	NA	NA	NA	5044554	5044730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5044600_5044700
ES.4207.5	chr11	+	2784	10	NNC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	-813	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5556998555782	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	8954	False	NA	16	True	AATAAA	-17	NA	5048112	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5048806_5049078_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.6	chr11	+	2325	8	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	42	2	intron_retention	FALSE	canonical	3	72	junction_1	52.1641835056998	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTCCTGAGTGTCAGTT	9960	False	NA	20	True	AATAAA	-21	NA	5049118	5056095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.7	chr11	+	1991	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	349	-7	2	5	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGTCAGTTGTC	NA	False	NA	23	True	AATAAA	-24	NA	5049274	5056098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ES.4207.8	chr11	+	3425	5	NIC	ENSMUSG00000034175.14	novel	714	5	NA	NA	-52	4	intron_retention	FALSE	canonical	3	20	junction_2	102.787097925761	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGAGTGTCAGTTGT	NA	False	NA	22	True	AATAAA	-23	NA	5049380	5056097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049478_5049747_5049899_5050384_5050588_5051868_5051906_5053160
ES.4207.9	chr11	+	1967	8	NIC	ENSMUSG00000034175.14	novel	1790	9	NA	NA	-52	0	intron_retention	FALSE	canonical	3	31	junction_6	76.0864170344672	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049380	5056091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055718_5055799
ES.4208.100	chr11	-	982	4	NIC	ENSMUSG00000009079.17	novel	2269	15	NA	NA	583	-2	intron_retention	FALSE	canonical	3	4427	junction_2	232.89911979224	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGCTGAGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	5021637	5019898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020724_5020995_5021159_5021519
ES.4208.101	chr11	-	2085	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	3	-2	combination_of_known_splicesites	FALSE	canonical	3	399	junction_8	1263.94068777859	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGCTGAGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	5049039	5019898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.103	chr11	-	2066	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1381.11754879654	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGCTGAGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	5049089	5019898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032349_5033409_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.109	chr11	-	3204	8	ISM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	-7	10378	-7	342	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	2831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATGGCTTTATGCTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	5049074	5030075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.11	chr11	-	5991	14	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	5136	1	intron_retention	FALSE	canonical	3	3872	junction_7	672.004481881363	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5043906	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868
ES.4208.110	chr11	-	1836	9	NNC	ENSMUSG00000009079.17	novel	765	3	NA	NA	5	270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1820.39792610709	2825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCTGAGCCTTGGTAT	NA	False	NA	NA	False	TATAAA	-12	NA	5049091	5030147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5030286_5031598_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.111	chr11	-	3760	7	NIC	ENSMUSG00000009079.17	novel	1290	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	4392	junction_6	541.019639199909	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGCATTTTATG	NA	False	NA	-5	True	ATTAAA	-21	NA	5049046	5030417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.112	chr11	-	3687	8	ISM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	-633	10729	-633	0	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	2822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGCATTTTATG	NA	False	NA	-5	True	ATTAAA	-21	NA	5049899	5030417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.113	chr11	-	3009	9	NNC	ENSMUSG00000009079.17	novel	1290	9	NA	NA	9	-3	intron_retention	FALSE	canonical	0	0	junction_2	2336.69194589274	2822	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAGAGAGAGCATTTT	NA	False	NA	-8	True	ATTAAA	-18	NA	5049033	5030420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5032434_5033359_5033572_5034910_5035102_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.114	chr11	-	2658	8	ISM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	-27	10944	2	-224	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTCAGTACTCAGCCGG	NA	False	NA	NA	False	AAAAAG	-5	NA	5049094	5030641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.115	chr11	-	3579	7	NIC	ENSMUSG00000009079.17	novel	1290	9	NA	NA	7	-224	intron_retention	FALSE	canonical	3	4392	junction_6	541.019639199909	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTCAGTACTCAGCCGG	NA	False	NA	NA	False	AAAAAG	-5	NA	5049089	5030641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.116	chr11	-	6146	1	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-752	-225	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2807	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTACTCAGTACTCAGCCG	NA	False	NA	NA	False	AAAAAG	-4	NA	5036788	5030642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5030600_5036800
ES.4208.117	chr11	-	2151	8	ISM	ENSMUSG00000009079.17	ENSMUST00000093365.12	1290	9	-12	715	-11	-715	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	2801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGACATAGACACTTG	NA	False	NA	NA	False	AATAAA	-26	NA	5049078	5031132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.118	chr11	-	2013	8	ISM	ENSMUSG00000009079.17	ENSMUST00000093365.12	1290	9	2	839	2	765	5prime_fragment	FALSE	canonical	3	4248	junction_1	634.809243403248	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGTGTTTATAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	5049064	5031256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.119	chr11	-	2184	7	NNC	ENSMUSG00000009079.17	novel	1290	9	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	69	junction_4	2000.89829826506	2793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTTCAGTCCCCTTCA	NA	False	NA	NA	False	NA	NA	NA	5049073	5032023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5033572_5035895_5036064_5037959_5038147_5041858_5041986_5043680_5043733_5043868_5043906_5049008
ES.4208.12	chr11	-	5187	2	NNC	ENSMUSG00000009079.17	novel	898	3	NA	NA	-2792	1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5025012	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5023868_5024005
ES.4208.13	chr11	-	2392	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1522.26672961533	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049073	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033366_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.15	chr11	-	2409	17	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	16	junction_7	1372.08176545487	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049098	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028580_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.16	chr11	-	2139	15	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	1394.9617506277	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049032	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.17	chr11	-	2547	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	292	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	1381.54471827507	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5048750	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5048534
ES.4208.18	chr11	-	2301	15	FSM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	-22	-10	7	1	multi-exon	FALSE	canonical	3	21	junction_7	1383.04088950429	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049089	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028580_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.2	chr11	-	5631	15	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-4	4	intron_retention	FALSE	non_canonical	0	0	junction_11	1334.78516195357	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCCTCTGTTCTCGTGT	NA	False	NA	-9	True	AATAAA	-27	NA	5049046	5019684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041864_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.21	chr11	-	2406	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	1363.53153612229	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049065	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020122_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.22	chr11	-	2360	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1503.10457366578	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049041	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036057_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.25	chr11	-	2396	16	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	1731.98690782837	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049090	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020122_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.29	chr11	-	2349	17	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	1318.12677068397	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5049059	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.3	chr11	-	3201	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	-610	-3	-610	3	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCCTCTGTTCTCGTG	NA	False	NA	-10	True	AATAAA	-26	NA	5049876	5019685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.30	chr11	-	2375	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1369.09122316365	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5049064	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035905_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.31	chr11	-	1024	2	NIC	ENSMUSG00000009079.17	novel	649	3	NA	NA	33	-1	intron_retention	FALSE	canonical	3	4881	junction_1	0	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5020858	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020481_5020625
ES.4208.32	chr11	-	2580	16	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	222	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1750.13924017491	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5048820	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5048534
ES.4208.33	chr11	-	2173	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	1359.70337288036	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5049033	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.35	chr11	-	4789	5	FSM	ENSMUSG00000009079.17	ENSMUST00000141002.8	1033	5	-2339	-1417	473	-1	multi-exon	FALSE	canonical	3	3872	junction_4	288.767207279497	3006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5031867	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919
ES.4208.37	chr11	-	2358	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	399	junction_8	1263.94068777859	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5049103	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.38	chr11	-	5128	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	3872	junction_7	651.725286366034	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCCTCCTCTGTTCT	NA	False	NA	-14	True	AATAAA	-22	NA	5049074	5019689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.4	chr11	-	2362	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	1335.63462069535	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049074	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.40	chr11	-	5652	15	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3872	junction_7	627.752977707321	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTCCTCCTCTGTTC	NA	False	NA	-15	True	AATAAA	-21	NA	5049067	5019690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.41	chr11	-	2392	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1313.54419772423	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCCTCCTCCTCTGTT	NA	False	NA	-16	True	AATAAA	-20	NA	5049056	5019691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041841_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.44	chr11	-	2368	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1683.7359084414	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCATCCTCCTCCTCT	NA	False	NA	-19	True	AATAAA	-17	NA	5049050	5019694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021523_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041989_5043680_5043733_5043868_5043906_5049008
ES.4208.47	chr11	-	2590	3	NIC	ENSMUSG00000009079.17	novel	2269	15	NA	NA	-550	2	intron_retention	FALSE	canonical	3	4547	junction_2	211.5	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCATCCTCCTCCTC	NA	False	NA	-20	True	AATAAA	-16	NA	5022770	5019695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5021159_5021519
ES.4208.48	chr11	-	2422	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1373.20439432509	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCATCCTCCTCCTC	NA	False	NA	-20	True	AATAAA	-16	NA	5049064	5019695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020184_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.5	chr11	-	6250	13	NIC	ENSMUSG00000009079.17	novel	2269	15	NA	NA	4	1	intron_retention	FALSE	canonical	3	4146	junction_4	594.102895128445	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049062	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5021159_5021519_5021643_5022811_5022942_5028472_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.50	chr11	-	2394	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_11	1507.32312395186	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCATCCTCCTCCTC	NA	False	NA	-20	True	AATAAA	-16	NA	5049056	5019695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033592_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.57	chr11	-	2473	5	NIC	ENSMUSG00000009079.17	novel	2269	15	NA	NA	27	2	intron_retention	FALSE	canonical	3	4146	junction_3	166.263909192585	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCATCCTCCTCCTC	NA	False	NA	-20	True	AATAAA	-16	NA	5029501	5019695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472
ES.4208.60	chr11	-	2357	16	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1390.87822935327	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCATCCTCCTCCT	NA	False	NA	-21	True	AATAAA	-15	NA	5049071	5019696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5048999
ES.4208.62	chr11	-	2371	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	150	junction_15	1317.06999624166	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	False	NA	-22	True	AATAAA	-14	NA	5049064	5019697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043727_5043868_5043906_5049008
ES.4208.65	chr11	-	3306	7	ISM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	18462	0	-706	0	3prime_fragment	FALSE	canonical	3	4146	junction_5	275.553785836611	2973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	False	NA	-22	True	AATAAA	-14	NA	5030605	5019697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472
ES.4208.66	chr11	-	2391	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1375.28924088489	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTGTCATCCTCCTC	NA	False	NA	-23	True	AATAAA	-13	NA	5049054	5019698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028894_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.7	chr11	-	2387	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1318.12677068397	3009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTCCTCTGTTCTCG	NA	False	NA	-12	True	AATAAA	-24	NA	5049070	5019687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032258_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.74	chr11	-	5432	15	NIC	ENSMUSG00000009079.17	novel	2174	18	NA	NA	-11	0	intron_retention	FALSE	canonical	3	3872	junction_7	627.752977707321	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5049053	5019896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.76	chr11	-	2167	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	1335.63462069535	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049089	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.77	chr11	-	1959	14	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	200	junction_13	1436.65144031068	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049056	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5049008
ES.4208.79	chr11	-	4910	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	3872	junction_7	651.725286366034	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049064	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.80	chr11	-	2024	16	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	1359.26244052509	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049089	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.82	chr11	-	1971	15	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	1394.9617506277	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049074	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.83	chr11	-	2447	18	NNC	ENSMUSG00000009079.17	novel	2174	18	NA	NA	-342	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	1340.29771779196	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049608	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008_5049263_5049536
ES.4208.84	chr11	-	2199	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1313.54419772423	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049070	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038163_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.86	chr11	-	2876	18	NNC	ENSMUSG00000009079.17	novel	2174	18	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1765.62800025773	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049044	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037132_5037849_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.87	chr11	-	2184	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1381.11754879654	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049082	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033370_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.90	chr11	-	2217	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	1363.53153612229	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049086	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020122_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ES.4208.92	chr11	-	2057	15	NNC	ENSMUSG00000009079.17	novel	2269	15	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1817.5896070323	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049046	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028580_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043915_5049008
ES.4208.95	chr11	-	2182	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1470.05497213327	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049074	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041975_5043680_5043733_5043868_5043906_5049008
ES.4208.97	chr11	-	1304	11	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1403.04897990056	3008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGAGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	5049071	5019897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032362_5049036
ES.4209.1	chr11	+	173	1	Intergenic	novelGene_3232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAACAAAAACAAGAA	NA	False	NA	NA	False	NA	NA	NA	5072468	5072641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5072500_5072600
ES.421.1	chr1	+	7265	2	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAAGGTGGACTCCAG	8795	False	NA	NA	False	NA	NA	NA	47668149	47675622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_47668447_47668654
ES.421.2	chr1	+	7266	2	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGAAGGTGGACTCCAG	8796	False	NA	NA	False	NA	NA	NA	47668150	47675622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_47668287_47668492
ES.4210.1	chr11	-	1945	15	FSM	ENSMUSG00000034164.18	ENSMUST00000062821.13	1947	15	0	2	0	-1	multi-exon	TRUE	canonical	3	8	junction_2	4.11815294439988	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCGCTTGGTCTCTATG	7862	False	NA	NA	False	AATAAA	-17	NA	5102257	5056266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
ES.4210.2	chr11	-	5986	15	NIC	ENSMUSG00000034164.18	novel	1947	15	NA	NA	-222	-1	intron_retention	FALSE	canonical	0	0	junction_9	7.32517325838141	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCGCTTGGTCTCTATG	7640	False	NA	NA	False	AATAAA	-17	NA	5102479	5056266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084073_5084173_5084348_5084411_5085353_5085432_5093826_5093931_5094294_5094409_5102121
ES.4210.3	chr11	-	177	1	Intergenic	novelGene_3233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGAGG	2453	False	NA	NA	False	NA	NA	NA	5077344	5077167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5077200_5077300
ES.4211.1	chr11	+	5784	2	Antisense	novelGene_ENSMUSG00000020393.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAATTGCTGTGGTCA	NA	False	NA	NA	False	NA	NA	NA	5172971	5179000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5176932_5177176
ES.4212.1	chr11	+	1502	1	Antisense	novelGene_ENSMUSG00000041961.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAACCAGAAACA	NA	False	NA	NA	False	NA	NA	NA	5226089	5227591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5226100_5227600
ES.4213.1	chr11	+	1227	8	Antisense	novelGene_ENSMUSG00000041961.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAGAA	NA	False	NA	NA	False	AATAAA	-25	NA	5232034	5361702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5232504_5233333_5233438_5236089_5236262_5237372_5237484_5239025_5239152_5239656_5239741_5288639_5288764_5361665
ES.4213.2	chr11	+	157	1	Intergenic	novelGene_3234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	5335510	5335667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5335500_5335700
ES.4213.3	chr11	+	2881	1	Intergenic	novelGene_3236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAACAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5341579	5344460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5341600_5344500
ES.4214.1	chr11	+	177	1	Intergenic	novelGene_3238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5396496	5396673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5396500_5396700
ES.4215.1	chr11	+	1827	2	Intergenic	novelGene_3239	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCCAACCGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	5407366	5414190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5407536_5412532
ES.4216.1	chr11	-	5053	9	FSM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-195	-2	-195	2	multi-exon	FALSE	canonical	3	45	junction_1	7.36121593216773	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGAGGCCAGGCTGTCA	NA	False	NA	-2	True	AATAAA	-23	NA	5211753	5141549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4216.10	chr11	-	2603	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-85	-2346	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	22.8424555986824	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTACCGCGAGTTTTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	5211643	5143897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5144109_5144146_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188364_5188503_5193774_5193938_5211434
ES.4216.12	chr11	-	1304	6	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-84	-3642	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	23.2430634813916	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGATTTTTGGTCTTGG	NA	False	NA	NA	False	NA	NA	NA	5211642	5158474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5159037_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4216.13	chr11	-	2201	5	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	-81	16925	-81	-3644	5prime_fragment	FALSE	canonical	3	52	junction_1	5.04975246918104	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTTGATTTTTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	5211639	5158476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4216.14	chr11	-	2927	9	NNC	ENSMUSG00000041961.15	novel	4926	9	NA	NA	18	12600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.2691756944821	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAGAAAAGA	6450	False	NA	NA	False	NA	NA	NA	5394829	5213723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5213796_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.15	chr11	-	6120	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	62	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	16.5997295281629	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACATGTGGTCATTGCT	6494	False	NA	-6	True	AATACA	-16	NA	5394785	5226326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5394387
ES.4216.16	chr11	-	7359	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCACATGTGGTCAT	6423	False	NA	-10	True	AATACA	-12	NA	5394856	5226330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.17	chr11	-	6292	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	9	10	9	-10	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCACATGTGGT	6441	False	NA	-13	True	AATACA	-9	NA	5394838	5226333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.18	chr11	-	4539	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-9	-549	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCATCCTTTTTCCC	6423	False	NA	NA	False	AGTAAA	-23	NA	5394856	5229150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.19	chr11	-	8119	6	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	63	-661	intron_retention	FALSE	canonical	3	35	junction_4	4.58693797647189	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTCTCCCTGGAGG	6495	False	NA	NA	False	ATTAAA	-21	NA	5394784	5229262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5232506_5233337_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.2	chr11	-	4903	9	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18.1379264250355	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	5211656	5141551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5145122_5148309_5148395_5149552_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4216.20	chr11	-	4527	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-109	-661	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTCTCCCTGGAGG	6323	False	NA	NA	False	ATTAAA	-21	NA	5394956	5229262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.21	chr11	-	4237	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-33	-661	intron_retention	FALSE	canonical	3	15	junction_1	10.2040408162449	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTCTCCCTGGAGG	6399	False	NA	NA	False	ATTAAA	-21	NA	5394880	5229262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5229762_5230807_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.22	chr11	-	4229	9	NNC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	36	-663	intron_retention	FALSE	non_canonical	0	0	junction_8	14.2691756944821	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTTGTCTCCCTGGA	6468	False	NA	NA	False	ATTAAA	-19	NA	5394811	5229264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387_5394635_5394785
ES.4216.23	chr11	-	3459	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	-89	2941	-89	-663	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTTGTCTCCCTGGA	6343	False	NA	NA	False	ATTAAA	-19	NA	5394936	5229264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.24	chr11	-	4192	10	NNC	ENSMUSG00000041961.15	novel	4926	9	NA	NA	-33542	-665	intron_retention	FALSE	canonical	0	0	junction_7	19.6964620499203	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATACTGTTGTCTCCCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	5428389	5229266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5417836_5417905_5428146_5428183_5428255
ES.4216.25	chr11	-	4471	10	NNC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	8	-726	intron_retention	FALSE	canonical	0	0	junction_6	20.1218510303821	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTACCAACTTCTGTTGA	6440	False	NA	NA	False	AATATA	-16	NA	5394839	5229327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5267632_5267700_5269321_5269381_5288637_5288764_5394387
ES.4216.26	chr11	-	4386	8	NNC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-1	-732	intron_retention	FALSE	canonical	1	1	junction_2	14.869500355302	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCTAACTACCAACTTC	6431	False	NA	NA	False	AATATA	-10	NA	5394848	5229333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5232506_5233337_5233479_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.27	chr11	-	3182	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	-29	3158	-29	-880	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGAGTCCTTTGCCTC	6403	False	NA	NA	False	NA	NA	NA	5394876	5229481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.29	chr11	-	4310	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	-111	-880	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGAGTCCTTTGCCTC	6321	False	NA	NA	False	NA	NA	NA	5394958	5229481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.3	chr11	-	4901	8	NIC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-170	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	19.551084316712	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	5211728	5141551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5188410_5188503_5193774_5193938_5211434
ES.4216.30	chr11	-	2089	6	ISM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	4	8749	4	3724	5prime_fragment	FALSE	canonical	3	35	junction_1	5.5281099844341	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGGAAAAGGGGAAAAAAAA	6436	False	NA	NA	False	NA	NA	NA	5394843	5235072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.31	chr11	-	4988	1	Intergenic	novelGene_3235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGTCTCACATATATTG	NA	False	NA	NA	False	NA	NA	NA	5343872	5338884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5338900_5343900
ES.4216.32	chr11	-	98	1	Intergenic	novelGene_3237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGAGCGAGTAAGATA	NA	False	NA	NA	False	NA	NA	NA	5366865	5366767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5366800_5366900
ES.4216.33	chr11	-	6541	1	Genic_Genomic	ENSMUSG00000041961.15	novel	NA	NA	NA	NA	-76	-149586	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAACACAAAAGACAACAA	6356	False	NA	NA	False	NA	NA	NA	5394923	5388382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_5388400_5394900
ES.4216.34	chr11	-	859	4	Intergenic	novelGene_3240	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	5428368	5417077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5417720_5417836_5417905_5428146_5428183_5428255
ES.4216.4	chr11	-	4913	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-95	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.262151374893	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	5211653	5141551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5144103_5144140_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4216.5	chr11	-	7543	16	Fusion	ENSMUSG00000041961.15_ENSMUSG00000020393.17	novel	4856	9	NA	NA	62	0	multi-exon	FALSE	canonical	0	0	junction_8	14.2850349044804	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	6494	False	NA	-4	True	AATAAA	-21	NA	5394785	5141551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ES.4216.7	chr11	-	4510	7	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.7371617907833	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGGTGAGGCCAGGC	NA	False	NA	-7	True	AATAAA	-18	NA	5188488	5141554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5145122_5148309_5148353_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410
ES.4216.8	chr11	-	5021	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-72	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	22.8424555986824	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGGTGAGGCCAGGC	NA	False	NA	-7	True	AATAAA	-18	NA	5211630	5141554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5210538_5210635_5211434
ES.4216.9	chr11	-	2588	10	NNC	ENSMUSG00000020393.17	novel	4856	9	NA	NA	-110	-2340	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.262151374893	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCGAGTTTTGTCCTTTG	NA	False	NA	NA	False	TTTAAA	-15	NA	5211668	5143891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5144103_5144140_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ES.4217.1	chr11	+	182	1	Intergenic	novelGene_3241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATATTTGGTTA	NA	False	NA	NA	False	NA	NA	NA	5456565	5456747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5456600_5456700
ES.4218.1	chr11	+	1668	4	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-3819	93	intron_retention	FALSE	canonical	1	11	junction_1	422.358720626068	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACTGAAAGCTTTTT	NA	False	NA	127	True	ACTAAA	-19	NA	5466839	5475986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5466925_5473332_5473468_5474238_5474385_5474684
ES.4218.10	chr11	+	1811	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	299	19	-37	-19	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470957	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.12	chr11	+	1744	5	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-37	-19	intron_retention	FALSE	canonical	3	27	junction_4	395.272374445774	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470957	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474751
ES.4218.13	chr11	+	3491	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	299	-1661	-37	1661	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAAATGAGTGTTAGG	NA	False	NA	NA	False	NA	NA	NA	5470957	5477554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.15	chr11	+	1779	5	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-36	19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	398.861739829731	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGTTGTAATTTCTCT	NA	False	NA	53	True	ATTAAA	-36	NA	5470958	5475912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5474307_5474385_5474684
ES.4218.16	chr11	+	868	4	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-36	4682	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_3	436.831266687214	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAGCACAACTTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	5470958	5480575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5480181
ES.4218.17	chr11	+	4632	2	NIC	ENSMUSG00000020484.20	novel	897	4	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	876	junction_1	0	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCCTGTTCTGTGATTT	NA	False	NA	31	True	ATTAAA	-14	NA	5470958	5475890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5474385_5474684
ES.4218.18	chr11	+	3689	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	318	-1878	-18	1878	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTTGTGACTTAAATT	NA	False	NA	NA	False	TATAAA	-16	NA	5470976	5477771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.19	chr11	+	813	5	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-13	4504	intron_retention	FALSE	canonical	1	5	junction_4	404.783275346203	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAGGGTAAAGATTTCC	NA	False	NA	NA	False	NA	NA	NA	5470981	5480397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5480181
ES.4218.2	chr11	+	1627	5	NNC	ENSMUSG00000020484.20	novel	897	4	NA	NA	-3793	-19	intron_retention	FALSE	canonical	2	5	junction_1	390.84715682732	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5466865	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5466925_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.20	chr11	+	2708	2	NNC	ENSMUSG00000020484.20	novel	987	3	NA	NA	-13	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	0	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470981	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471187_5473371
ES.4218.21	chr11	+	3200	4	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-13	7037	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_3	436.831266687214	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTGAGCAGTACCTT	NA	False	NA	NA	False	AATAAA	-17	NA	5470981	5482930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5480181
ES.4218.22	chr11	+	1644	5	NNC	ENSMUSG00000020484.20	novel	897	4	NA	NA	322	-19	intron_retention	FALSE	canonical	0	0	junction_1	393.009144295651	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5471326	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471403_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.23	chr11	+	4624	1	Antisense	novelGene_ENSMUSG00000020482.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAGTCCCACCCAAGT	NA	False	NA	NA	False	AATAAA	-12	NA	5476529	5481153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5476500_5481200
ES.4218.24	chr11	+	3219	1	Antisense	novelGene_ENSMUSG00000020482.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAGCACAACTTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	5477356	5480575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5477400_5480600
ES.4218.3	chr11	+	1976	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	246	-93	-90	93	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACTGAAAGCTTTTT	NA	False	NA	127	True	ACTAAA	-19	NA	5470904	5475986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ES.4218.4	chr11	+	3311	3	NIC	ENSMUSG00000020484.20	novel	897	4	NA	NA	-44	-19	intron_retention	FALSE	canonical	3	876	junction_2	16	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470950	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5472020_5473332_5474385_5474684
ES.4218.5	chr11	+	2582	4	NIC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	-37	-19	intron_retention	FALSE	canonical	3	876	junction_3	39.9110121255887	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470957	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5471201_5471922_5472020_5473332_5474385_5474684
ES.4218.6	chr11	+	2905	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	-47	-1871	-37	4	multi-exon	FALSE	canonical	3	908	junction_2	32	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTGATTTCTAGGGC	NA	False	NA	38	True	ATTAAA	-21	NA	5470957	5475897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5471201_5471922_5472020_5473332
ES.4218.7	chr11	+	1724	6	NNC	ENSMUSG00000020484.20	novel	1116	6	NA	NA	-37	-19	intron_retention	FALSE	non_canonical	0	0	junction_5	370.446433374651	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470957	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684_5475489_5475575
ES.4218.8	chr11	+	2111	4	ISM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	299	19	-37	-19	intron_retention	FALSE	canonical	3	908	junction_2	26.2339898266013	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGCAACACAGCG	NA	False	NA	15	True	TTTAAA	-16	NA	5470957	5475874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238
ES.4218.9	chr11	+	3621	2	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	-705	-948	-37	-2	intron_retention	FALSE	canonical	3	908	junction_1	0	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCCTGTTCTGTGATTTC	NA	False	NA	32	True	ATTAAA	-15	NA	5470957	5475891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5472020_5473332
ES.4219.1	chr11	+	156	2	Antisense	novelGene_ENSMUSG00000020482.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	5485387	5486017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5485471_5485944
ES.422.1	chr1	-	177	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47813449	47813272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_47813300_47813400
ES.4220.1	chr11	+	244	1	Intergenic	novelGene_3242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAATAATAACTGAG	1535	False	NA	NA	False	NA	NA	NA	5487427	5487671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5487400_5487700
ES.4221.1	chr11	-	5910	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-68	-2470	-68	2470	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGAGGCTTCATGCAT	NA	False	NA	4	True	AATAAA	-25	NA	5492255	5476416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.10	chr11	-	3384	5	NNC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.432083248746	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTATCTGTAATCCTG	NA	False	NA	-7	True	AATAAA	-19	NA	5492210	5478891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5481534_5484242_5484381_5484764_5484990_5491378_5491424_5491876
ES.4221.11	chr11	-	2370	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-24	1026	-24	-1026	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACTTGTTTCTTCATCT	NA	False	NA	5	True	NA	NA	NA	5492211	5479912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.12	chr11	-	5399	3	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	29	-1037	intron_retention	FALSE	canonical	3	397	junction_2	43	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAAGCCAGCTACTTG	NA	False	NA	-6	True	NA	NA	NA	5492158	5479923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5484990_5491372_5491424_5491876
ES.4221.13	chr11	-	5064	4	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	-21	-1038	intron_retention	FALSE	canonical	3	397	junction_3	38.0292285252044	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGAAGCCAGCTACTT	NA	False	NA	-7	True	NA	NA	NA	5492208	5479924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.14	chr11	-	2020	1	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	27	-11254	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTTGATACTTAGACA	NA	False	NA	NA	False	NA	NA	NA	5492160	5490140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5490100_5492200
ES.4221.15	chr11	-	1014	1	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	7	-12280	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAGAAAATCCTA	NA	False	NA	NA	False	ATTAAA	-3	NA	5492180	5491166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5491200_5492200
ES.4221.2	chr11	-	8465	4	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	83	2467	intron_retention	FALSE	canonical	3	397	junction_3	38.0292285252044	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAACCGAGGCTTCATG	NA	False	NA	1	True	AATAAA	-22	NA	5492104	5476419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.3	chr11	-	6830	3	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	-10	355	intron_retention	FALSE	canonical	3	397	junction_2	43	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTATTTTTAACC	NA	False	NA	NA	False	NA	NA	NA	5492197	5478531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5484990_5491372_5491424_5491876
ES.4221.4	chr11	-	3477	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	-103	-2	-103	2	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTAATCCTGTATAAAT	NA	False	NA	0	True	AATAAA	-26	NA	5492290	5478884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.5	chr11	-	3209	5	NNC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	187.427819439911	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGTAATCCTGTATAA	NA	False	NA	-2	True	AATAAA	-24	NA	5492152	5478886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5481534_5484242_5484381_5484892_5484990_5491372_5491424_5491876
ES.4221.8	chr11	-	3305	6	NNC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.48341027633	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATCTGTAATCCTGTA	NA	False	NA	-5	True	AATAAA	-21	NA	5492202	5478889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5479660_5479738_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ES.4221.9	chr11	-	6462	3	NNC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	43	-4	intron_retention	FALSE	canonical	2	2	junction_2	240.5	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTATCTGTAATCCTGT	NA	False	NA	-6	True	AATAAA	-20	NA	5492144	5478890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5484990_5491372_5491424_5491832
ES.4222.1	chr11	+	173	1	Intergenic	novelGene_3243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	5628025	5628198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5628000_5628200
ES.4222.2	chr11	+	173	2	Antisense	novelGene_ENSMUSG00000081691.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	198	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGACAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	5628026	5695017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5628037_5694854
ES.4222.3	chr11	+	184	1	Intergenic	novelGene_3244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATATTGCA	4652	False	NA	NA	False	NA	NA	NA	5633413	5633597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5633400_5633600
ES.4222.4	chr11	+	209	1	Intergenic	novelGene_3245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTGAGGTGTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	5657892	5658101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5657900_5658100
ES.4222.5	chr11	+	178	2	Antisense	novelGene_ENSMUSG00000049680.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATATTAAAC	NA	False	NA	NA	False	NA	NA	NA	5657893	5692423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_5658051_5692402
ES.4222.6	chr11	+	951	1	Intergenic	novelGene_3248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCAAATGTAGAGAC	NA	False	NA	NA	False	NA	NA	NA	5688446	5689397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5688400_5689400
ES.4222.7	chr11	+	177	1	Intergenic	novelGene_3249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGACAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	5694841	5695018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5694800_5695000
ES.4223.1	chr11	+	732	5	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	-2	230	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	42.6292153340875	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCCTGGTTACACTAG	NA	False	NA	NA	False	ACTAAA	-25	NA	5712126	5734167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5712241_5715508_5715572_5730205_5730312_5732184_5732358_5733891
ES.4223.10	chr11	+	4146	4	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	4	-1253	intron_retention	FALSE	canonical	3	32	junction_3	31.4147877422224	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAGACTGTGAGTCA	NA	False	NA	9	True	NA	NA	NA	5712153	5730623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5712241_5715508_5719073_5719166_5719244_5730205
ES.4223.11	chr11	+	1326	3	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	16	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	12.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGACATTTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	5712165	5734712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5712241_5730205_5730636_5733891
ES.4223.12	chr11	+	4903	5	NNC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	18	1	intron_retention	FALSE	canonical	2	4	junction_2	35.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGACATTTAAGTTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	5712167	5734711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5712241_5715508_5715572_5718888_5719073_5719166_5719244_5730205
ES.4223.13	chr11	+	2046	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	41	2836	-26	-2	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5712190	5731874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
ES.4223.14	chr11	+	176	1	Intergenic	novelGene_3252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTAGTTA	NA	False	NA	NA	False	NA	NA	NA	5734804	5734980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5734800_5735000
ES.4223.16	chr11	+	2152	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	-25	-126	-25	126	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGTGTGTACATGTGT	NA	False	NA	97	True	NA	NA	NA	5738462	5750755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.17	chr11	+	1852	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	-19	168	-19	-168	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGCCCGTGAGTTTTG	NA	False	NA	32	True	NA	NA	NA	5738468	5750461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.19	chr11	+	2119	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-46	-435	-12	94	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAAGCTTAGGCTCTG	NA	False	NA	65	True	NA	NA	NA	5738475	5750723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.2	chr11	+	1838	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	6	2	6	-2	multi-exon	FALSE	canonical	3	68	junction_2	16.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	5712134	5731874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5712241_5715508_5715572_5730205
ES.4223.20	chr11	+	2120	12	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	-3	167	intron_retention	FALSE	non_canonical	0	0	junction_9	123.060557557839	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGACTAGCCCGTGA	NA	False	NA	26	True	NA	NA	NA	5738484	5750455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747721_5748015_5748111_5748215_5748326_5749233_5749340_5749859
ES.4223.21	chr11	+	6189	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	0	-4188	0	3855	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCTGATGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5738487	5754817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.23	chr11	+	2074	14	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	150.919038603543	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATTGCGTGCTATACCC	NA	False	NA	25	True	NA	NA	NA	5738487	5750612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5743962_5744053_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.24	chr11	+	1811	13	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	1	161	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	117.606334863391	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACCAAAGTCAGACTAGC	NA	False	NA	20	True	NA	NA	NA	5738488	5750449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749242_5749340_5749859
ES.4223.25	chr11	+	6200	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-33	-4529	1	3855	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCTGATGTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	5738488	5754817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.28	chr11	+	1826	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-24	-164	10	164	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAGTCAGACTAGCCCG	NA	False	NA	23	True	NA	NA	NA	5738497	5750452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.29	chr11	+	1893	13	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	14	166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	118.942096089745	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCAGACTAGCCCGTG	NA	False	NA	25	True	NA	NA	NA	5738501	5750454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749778
ES.4223.3	chr11	+	523	2	ISM	ENSMUSG00000083844.9	ENSMUST00000131130.8	595	3	-15	1618	6	-1254	5prime_fragment	FALSE	canonical	3	28	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGCAGACTGTGAGTC	NA	False	NA	8	True	NA	NA	NA	5712134	5730622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5712241_5730205
ES.4223.30	chr11	+	2345	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-20	-687	14	13	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	NA	False	NA	11	True	TATAAA	-12	NA	5738501	5750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.31	chr11	+	3871	12	NNC	ENSMUSG00000020476.15	novel	2295	13	NA	NA	14	-2	intron_retention	FALSE	canonical	0	0	junction_11	140.378119836838	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGGCTCAGCCCATCC	NA	False	NA	-31	True	NA	NA	NA	5738501	5750627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749778
ES.4223.32	chr11	+	1807	13	NNC	ENSMUSG00000020476.15	novel	2295	13	NA	NA	16	167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	136.021725184701	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGACTAGCCCGTGA	NA	False	NA	26	True	NA	NA	NA	5738503	5750455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741841_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.33	chr11	+	3225	11	NIC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	16	154	intron_retention	FALSE	canonical	3	305	junction_6	43.0097663327761	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATCTTGACCAAAGTCA	NA	False	NA	13	True	NA	NA	NA	5738503	5750442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5745595_5746745_5746824_5747023_5747176_5747286_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.35	chr11	+	1762	12	NIC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	16	167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	121.838939886751	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGACTAGCCCGTGA	NA	False	NA	26	True	NA	NA	NA	5738503	5750455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.36	chr11	+	4315	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	-18	-2659	16	1985	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACCGCAGTGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	5738503	5752947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.37	chr11	+	1844	11	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	127.613478911908	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCTGGCTCAGCCCATC	NA	False	NA	-32	True	NA	NA	NA	5738503	5750626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747181_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.38	chr11	+	1554	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	16	431	16	-90	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCCTCTCCAGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	5738503	5750198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.39	chr11	+	2444	14	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	16	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	150.919038603543	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	NA	False	NA	11	True	TATAAA	-12	NA	5738503	5750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5743962_5744076_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.4	chr11	+	4674	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	8	-2836	8	2	multi-exon	FALSE	canonical	3	68	junction_2	16.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGACATTTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	5712136	5734712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5712241_5715508_5715572_5730205
ES.4223.40	chr11	+	1905	13	NNC	ENSMUSG00000020476.15	novel	1638	13	NA	NA	16	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	151.540125782653	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGACTAGCCCGTGAG	NA	False	NA	27	True	NA	NA	NA	5738503	5750456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749778
ES.4223.41	chr11	+	2321	12	NIC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	16	45	intron_retention	FALSE	canonical	3	305	junction_7	41.0101781359677	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGGCCCACAGCCCAT	NA	False	NA	16	True	GATAAA	-16	NA	5738503	5750674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.42	chr11	+	2442	12	NIC	ENSMUSG00000020476.15	novel	2295	13	NA	NA	16	13	intron_retention	FALSE	canonical	3	356	junction_8	27.6537026947075	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	NA	False	NA	11	True	TATAAA	-12	NA	5738503	5750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.45	chr11	+	2628	12	NNC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	-14	18	intron_retention	FALSE	non_canonical	0	0	junction_9	124.741451619204	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTCGTGCATTTCAG	NA	False	NA	16	True	TATAAA	-17	NA	5738507	5750980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5748113_5748215_5748326_5749233_5749340_5749859
ES.4223.48	chr11	+	1979	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	20	2	-14	-2	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTGGCTCAGCCCATCC	NA	False	NA	-31	True	NA	NA	NA	5738507	5750627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.5	chr11	+	583	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	9	1254	9	-1254	multi-exon	FALSE	canonical	3	68	junction_2	16.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGCAGACTGTGAGTC	NA	False	NA	8	True	NA	NA	NA	5712137	5730622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5712241_5715508_5715572_5730205
ES.4223.50	chr11	+	4357	10	NIC	ENSMUSG00000020476.15	novel	2295	13	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	125	junction_6	94.4645730184367	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCTGGCTCAGCCCAT	NA	False	NA	-33	True	NA	NA	NA	5738518	5750625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.52	chr11	+	2181	12	NIC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	11	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	122.941294866579	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	NA	False	NA	11	True	TATAAA	-12	NA	5738540	5750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5738643_5741791_5741848_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4223.53	chr11	+	1120	1	Genic_Genomic	ENSMUSG00000020476.15	novel	NA	NA	NA	NA	11326	13	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAGAGCATTCGTGCAT	9108	False	NA	11	True	TATAAA	-12	NA	5749855	5750975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_5749900_5751000
ES.4223.6	chr11	+	847	5	ISM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	-12	4088	9	-1254	5prime_fragment	FALSE	canonical	3	13	junction_2	33.1313673125635	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGCAGACTGTGAGTC	NA	False	NA	8	True	NA	NA	NA	5712137	5730622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205
ES.4223.7	chr11	+	1415	4	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	40.7130882586369	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGACATTTAAGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	5712137	5734710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5733891
ES.4223.8	chr11	+	1509	5	NIC	ENSMUSG00000083844.9	novel	1840	7	NA	NA	-10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	43.5918570377542	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGACATTTAAGTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	5712139	5734712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5712241_5715508_5715572_5730205_5730636_5732184_5732279_5733891
ES.4223.9	chr11	+	3221	18	Fusion	ENSMUSG00000020476.15_ENSMUSG00000083844.9	novel	2001	13	NA	NA	-10	31	multi-exon	FALSE	canonical	0	0	junction_5	174.35121456635	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTTTGGAAGAGGCC	NA	False	NA	29	True	TATAAA	-30	NA	5712139	5750993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_5712241_5715508_5715572_5730205_5730312_5732184_5732358_5733891_5733934_5738116_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ES.4224.1	chr11	-	821	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	-13	187	-10	156	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCTCTTGGTCTCT	NA	False	NA	1	True	NA	NA	NA	5657700	5654169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ES.4224.10	chr11	-	681	4	NNC	ENSMUSG00000020477.11	novel	995	4	NA	NA	-37	10	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	1216.61890317205	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTCTTTTTT	NA	False	NA	-15	True	AATAAA	-28	NA	5657727	5654315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5654733_5657297_5657410_5657486_5657556_5657644
ES.4224.12	chr11	-	729	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	6	-232	3	3	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTCTCTCTCTCTTT	NA	False	NA	-22	True	AATAAA	-21	NA	5657684	5654322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5654733_5657297_5657556_5657623
ES.4224.13	chr11	-	3377	1	Genic_Genomic	ENSMUSG00000020477.11	novel	NA	NA	NA	NA	-10	2	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTCTCTCTCTCTT	NA	False	NA	-23	True	AATAAA	-20	NA	5657700	5654323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_5654300_5657700
ES.4224.14	chr11	-	3277	2	NIC	ENSMUSG00000020477.11	novel	503	3	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1753	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657670	5654325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5657556_5657623
ES.4224.15	chr11	-	708	3	NNC	ENSMUSG00000020477.11	novel	503	3	NA	NA	1	-2	intron_retention	FALSE	canonical	3	67	junction_2	1390.5	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCCTCTGGGTCTCTCTC	NA	False	NA	-27	True	AATAAA	-16	NA	5657689	5654327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5654733_5657297_5657556_5657644
ES.4224.17	chr11	-	601	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	21	-119	-2	87	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGTAGAGCCTACAAGG	NA	False	NA	-135	True	TATAAA	-13	NA	5657669	5654435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5654733_5657297_5657556_5657623
ES.4224.18	chr11	-	2422	1	NIC	ENSMUSG00000020477.11	novel	714	5	NA	NA	0	-609	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCACTTTGGATTTTATT	NA	False	NA	NA	False	NA	NA	NA	5657690	5655268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5655300_5657700
ES.4224.2	chr11	-	875	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	12	-384	9	155	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657678	5654170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5654733_5657297_5657556_5657623
ES.4224.3	chr11	-	783	4	NNC	ENSMUSG00000020477.11	novel	995	4	NA	NA	3	155	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	1216.61890317205	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTCTCTTGGTCTC	NA	False	NA	0	True	NA	NA	NA	5657684	5654170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5654733_5657297_5657410_5657486_5657556_5657644
ES.4224.5	chr11	-	3452	2	NIC	ENSMUSG00000020477.11	novel	700	3	NA	NA	-10	154	intron_retention	FALSE	canonical	3	2385	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGCCTCTCTTGGTCT	NA	False	NA	-1	True	NA	NA	NA	5657700	5654171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5657410_5657486
ES.4224.6	chr11	-	679	3	NIC	ENSMUSG00000020477.11	novel	995	4	NA	NA	-7	152	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	850	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCCTGGCCTCTCTTGGT	NA	False	NA	-3	True	NA	NA	NA	5657674	5654173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5654733_5657486_5657556_5657623
ES.4224.9	chr11	-	689	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	-27	333	-24	10	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTCTTTTTT	NA	False	NA	-15	True	AATAAA	-28	NA	5657714	5654315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ES.4225.1	chr11	-	4756	6	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-223	-305	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	17.2973986483517	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCCCTCCTACTCCTGA	8624	False	NA	NA	False	AATAAA	-19	NA	5691373	5663721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691347
ES.4225.10	chr11	-	3640	6	NNC	ENSMUSG00000049680.18	novel	3972	6	NA	NA	313	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.8245481882994	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAATGTATACTC	NA	False	NA	-4	True	NA	NA	NA	5712058	5664984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676853_5711880
ES.4225.11	chr11	-	3631	4	NIC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-200	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.7725090401036	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAATGTATACTC	8647	False	NA	-4	True	NA	NA	NA	5691350	5664984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5668264_5676347_5676419_5676830_5676858_5691096
ES.4225.12	chr11	-	3581	4	NIC	ENSMUSG00000049680.18	novel	3972	6	NA	NA	278	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.9977776790036	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAGTTGAATGTATACT	NA	False	NA	-5	True	NA	NA	NA	5712093	5664985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5668264_5672801_5672841_5673110_5673162_5711880
ES.4225.14	chr11	-	2629	6	FSM	ENSMUSG00000049680.18	ENSMUST00000120306.8	3972	6	294	1049	294	-1033	multi-exon	FALSE	canonical	2	4	junction_5	21.2414688757628	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGTACCAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	5712077	5666019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
ES.4225.15	chr11	-	2827	6	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-201	-1036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.7034559460009	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTTTGTGTACCAGAAC	8646	False	NA	NA	False	NA	NA	NA	5691351	5666022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5668264_5672801_5672841_5673110_5673305_5676347_5676419_5676830_5676858_5691096
ES.4225.16	chr11	-	158	1	Intergenic	novelGene_3246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	5670117	5669959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5670000_5670100
ES.4225.17	chr11	-	163	1	Intergenic	novelGene_3247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5670309	5670146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5670100_5670300
ES.4225.18	chr11	-	178	1	Intergenic	novelGene_3250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5708439	5708261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5708300_5708400
ES.4225.2	chr11	-	4977	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-197	309	-197	-309	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGAGTCCCTCCTACTC	8650	False	NA	NA	False	AATAAA	-15	NA	5691347	5663725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
ES.4225.3	chr11	-	4480	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-158	767	-158	-767	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTGGTGCACACCTTT	8689	False	NA	NA	False	TATAAA	-23	NA	5691308	5664183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
ES.4225.4	chr11	-	3653	4	Fusion	ENSMUSG00000020477.11_ENSMUSG00000049680.18	novel	394	5	NA	NA	-223	-7	multi-exon	FALSE	canonical	0	0	junction_3	24.9977776790036	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATGTATACTCAAATGAC	8624	False	NA	3	True	NA	NA	NA	5691373	5664977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_5668264_5672801_5672841_5673110_5673162_5691096
ES.4225.5	chr11	-	3716	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	-191	1564	-191	6	multi-exon	FALSE	canonical	3	47	junction_5	4.96386945839634	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAATGTATACTCAAAT	8656	False	NA	0	True	NA	NA	NA	5691341	5664980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
ES.4225.7	chr11	-	3518	6	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-248	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	17.2973986483517	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAATGTATACTC	8599	False	NA	-4	True	NA	NA	NA	5691398	5664984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691347
ES.4225.8	chr11	-	3470	2	NIC	ENSMUSG00000049680.18	novel	3972	6	NA	NA	300	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAATGTATACTC	NA	False	NA	-4	True	NA	NA	NA	5712071	5664984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5668264_5711880
ES.4225.9	chr11	-	3577	6	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.7034559460009	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGTTGAATGTATACTC	8841	False	NA	-4	True	NA	NA	NA	5691156	5664984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5668264_5672801_5672841_5673110_5673212_5676347_5676419_5676830_5676858_5691096
ES.4226.1	chr11	-	3641	1	Intergenic	novelGene_3251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCTGTTATGTTTATT	2750	False	NA	NA	False	NA	NA	NA	5738411	5734770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5734800_5738400
ES.4226.2	chr11	-	462	1	Intergenic	novelGene_3253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATAGTGGGGTAATGA	2752	False	NA	NA	False	NA	NA	NA	5738409	5737947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_5737900_5738400
ES.4227.1	chr11	-	4909	5	Antisense	novelGene_ENSMUSG00000020476.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGGACTGGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	5748129	5741461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_5745594_5746745_5746824_5747024_5747174_5747284_5747720_5748014
ES.4228.1	chr11	-	472	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	370	-2	370	2	multi-exon	FALSE	canonical	3	39	junction_1	6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGTTTCATATAGCTGA	9018	False	NA	NA	False	AATAAA	-17	NA	5753363	5751637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5751840_5752998_5753180_5753274
ES.4229.1	chr11	+	164	1	Intergenic	novelGene_3254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	625	False	NA	NA	False	NA	NA	NA	5762776	5762940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5762800_5762900
ES.423.1	chr1	+	3020	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAATAAAATTCTCGCT	3815	False	NA	NA	False	NA	NA	NA	48586501	48589521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_48586500_48589500
ES.4230.1	chr11	-	2896	12	NNC	ENSMUSG00000020474.12	novel	2697	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.4014343476442	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	614	False	NA	NA	False	AATAAA	-19	NA	5787782	5777859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193_5786375_5786841_5787046_5787560
ES.4230.10	chr11	-	4147	10	NIC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	8	-2	intron_retention	FALSE	canonical	0	0	junction_7	12.7405254073104	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAGTTTTACAAGTT	615	False	NA	NA	False	AATAAA	-16	NA	5787781	5777862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193_5786375_5787560
ES.4230.11	chr11	-	3174	9	NNC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	27	-2	intron_retention	FALSE	canonical	0	0	junction_6	15.7435502666965	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAGTTTTACAAGTT	407	False	NA	NA	False	AATAAA	-16	NA	5787989	5777862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779395_5779476_5779929_5780067_5780184_5781659_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193_5786375_5787560
ES.4230.12	chr11	-	2566	11	NNC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.9620232402382	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTATAGTTTTACAAG	615	False	NA	NA	False	AATAAA	-14	NA	5787781	5777864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787679
ES.4230.13	chr11	-	3272	4	ISM	ENSMUSG00000020474.12	ENSMUST00000109837.8	2697	11	-36	5584	-32	1356	intron_retention	FALSE	canonical	3	32	junction_2	5.24933858267454	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	571	False	NA	NA	False	NA	NA	NA	5787825	5783443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5784814_5785415_5785587_5785700_5785800_5786193
ES.4230.2	chr11	-	2238	2	FSM	ENSMUSG00000020474.12	ENSMUST00000143478.2	847	2	-37	-1354	-37	0	multi-exon	FALSE	canonical	3	36	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTTTTACAAGTTTT	8159	False	NA	NA	False	AATAAA	-18	NA	5780237	5777860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5779929_5780067
ES.4230.3	chr11	-	2697	11	NIC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	12.1227059685534	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTTTTACAAGTTTT	608	False	NA	NA	False	AATAAA	-18	NA	5787788	5777860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193_5786375_5787560
ES.4230.4	chr11	-	2826	12	NNC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.7798511429065	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTTTTACAAGTTTT	645	False	NA	NA	False	AATAAA	-18	NA	5787751	5777860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787288_5787456_5787560
ES.4230.5	chr11	-	2315	10	NNC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.2315462117278	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTTTTACAAGTTTT	2159	False	NA	NA	False	AATAAA	-18	NA	5786237	5777860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780184_5781659_5781781_5784741_5784814_5785415_5785516_5785628_5785800_5786193
ES.4230.6	chr11	-	7236	7	NIC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	48	-1	intron_retention	FALSE	canonical	3	32	junction_4	4.28174419288838	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	428	False	NA	NA	False	AATAAA	-17	NA	5787968	5777861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5779116_5779310_5779395_5779476_5779929_5780067_5780201_5781659_5784814_5785415_5785800_5786193
ES.4230.7	chr11	-	2897	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	26	1	26	-1	multi-exon	FALSE	canonical	3	32	junction_5	4.04969134626332	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	406	False	NA	NA	False	AATAAA	-17	NA	5787990	5777861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
ES.4230.8	chr11	-	4890	6	ISM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	3290	1	1759	-1	3prime_fragment	FALSE	canonical	3	32	junction_5	3.65513337649941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAGTTTTACAAGTTT	3670	False	NA	NA	False	AATAAA	-17	NA	5784726	5777861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659
ES.4230.9	chr11	-	2580	11	NNC	ENSMUSG00000020474.12	novel	2924	11	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	11.9620232402382	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAGTTTTACAAGTT	552	False	NA	NA	False	AATAAA	-16	NA	5787844	5777862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787730
ES.4231.1	chr11	+	175	1	Intergenic	novelGene_3255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAGAAAGAAGT	230	False	NA	NA	False	NA	NA	NA	5798226	5798401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_5798200_5798400
ES.4232.1	chr11	+	4021	21	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-185	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	4.12886182863995	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTGTTCTGACTGGCT	8487	False	NA	10	True	AATAAA	-20	NA	5811761	5822090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.10	chr11	+	4223	18	NIC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	21	-6	intron_retention	FALSE	canonical	0	0	junction_2	5.49362637934614	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCACCTTCCCCTGTTCT	8693	False	NA	2	True	AATAAA	-12	NA	5811967	5822082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5812399_5813938_5814278_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513
ES.4232.11	chr11	+	3468	21	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	212	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	5.46717477313466	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCCCCTGTTCTGACTG	8884	False	NA	7	True	AATAAA	-17	NA	5812158	5822087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819458_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.12	chr11	+	2144	8	NIC	ENSMUSG00000020473.14	novel	2541	12	NA	NA	-539	-1	intron_retention	FALSE	canonical	3	11	junction_3	4.7723694538543	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCCCCTGTTCTGACTG	NA	False	NA	7	True	AATAAA	-17	NA	5818608	5822087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.2	chr11	+	4152	20	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-40	-2	intron_retention	FALSE	canonical	0	0	junction_14	5.67835956179418	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCCCCTGTTCTGACT	8632	False	NA	6	True	AATAAA	-16	NA	5811906	5822086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819009_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.4	chr11	+	4089	20	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-28	2	intron_retention	FALSE	canonical	3	11	junction_15	4.15756161223821	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTGTTCTGACTGGCT	8644	False	NA	10	True	AATAAA	-20	NA	5811918	5822090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.6	chr11	+	3697	19	NIC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	5.74993290352694	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCCCCTGTTCTGACT	8645	False	NA	6	True	AATAAA	-16	NA	5811919	5822086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.8	chr11	+	3820	21	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	5.56304772584237	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCCCCTGTTCTGACTG	8661	False	NA	7	True	AATAAA	-17	NA	5811935	5822087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816501_5816933_5817001_5817094_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ES.4232.9	chr11	+	3011	20	NNC	ENSMUSG00000020473.14	novel	3831	21	NA	NA	-9	724	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.61063493525744	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGCATGTGTGTGTG	8663	False	NA	NA	False	NA	NA	NA	5811937	5820865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5812401_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752
ES.4233.1	chr11	-	1628	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	295	junction_10	702.611101534839	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGTTCACTTGGGCAT	9525	False	NA	0	True	AATAAA	-23	NA	5828272	5822181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828187
ES.4233.10	chr11	-	2865	9	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	16	-1	intron_retention	FALSE	canonical	3	2233	junction_5	221.164213594786	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9601	False	NA	-7	True	AATAAA	-16	NA	5828196	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712
ES.4233.12	chr11	-	1614	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_9	949.795393755939	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9570	False	NA	-7	True	AATAAA	-16	NA	5828227	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825214_5826712_5826990_5828187
ES.4233.13	chr11	-	1554	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	869.177289164875	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9570	False	NA	-7	True	AATAAA	-16	NA	5828227	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824867_5825053_5825176_5826712_5826990_5828191
ES.4233.14	chr11	-	2586	5	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-224	-1	intron_retention	FALSE	canonical	3	2233	junction_2	148.102160686467	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	NA	False	NA	-7	True	AATAAA	-16	NA	5826988	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5823770_5824023_5824223_5824314_5824430_5824760_5825176_5826712
ES.4233.15	chr11	-	2014	9	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	869	junction_8	603.912646311534	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9581	False	NA	-7	True	AATAAA	-16	NA	5828216	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823770_5824023_5824223_5824314_5824885_5825053_5825176_5826712_5826990_5828191
ES.4233.17	chr11	-	4113	6	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	295	junction_5	816.156112517697	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9579	False	NA	-7	True	AATAAA	-16	NA	5828218	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5823567_5823688_5823770_5824023_5824223_5824314_5826990_5828187
ES.4233.19	chr11	-	3492	7	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-224	-1	intron_retention	FALSE	canonical	3	2224	junction_3	252.387763834409	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	NA	False	NA	-7	True	AATAAA	-16	NA	5826988	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760
ES.4233.20	chr11	-	1508	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1031.55155469807	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9598	False	NA	-7	True	AATAAA	-16	NA	5828199	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823504_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828164
ES.4233.21	chr11	-	1497	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1153.55532593803	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGAACCTTGTTCACT	9579	False	NA	-7	True	AATAAA	-16	NA	5828218	5822188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823504_5823688_5823770_5824023_5824223_5824321_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828187
ES.4233.22	chr11	-	1516	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-24	-3	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	880.90807692971	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTCTGAACCTTGTTCA	9561	False	NA	-9	True	AATAAA	-14	NA	5828236	5822190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823504_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ES.4233.24	chr11	-	1691	10	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	869	junction_9	569.374532293719	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTCTGAACCTTGTTCA	9571	False	NA	-9	True	AATAAA	-14	NA	5828226	5822190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ES.4233.25	chr11	-	1542	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	784.230967253908	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTCTGAACCTTGTTCA	9573	False	NA	-9	True	AATAAA	-14	NA	5828224	5822190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826965_5828191
ES.4233.26	chr11	-	1567	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	787.109782685999	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTCTGAACCTTGTTC	9599	False	NA	-10	True	AATAAA	-13	NA	5828198	5822191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828164
ES.4233.30	chr11	-	1563	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	982.797842895476	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGGTCTGAACCTTGTT	9565	False	NA	-11	True	AATAAA	-12	NA	5828232	5822192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822405_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828187
ES.4233.31	chr11	-	1831	10	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-24	-5	intron_retention	FALSE	canonical	3	869	junction_9	558.185242936517	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGGTCTGAACCTTGTT	9561	False	NA	-11	True	AATAAA	-12	NA	5828236	5822192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5822419_5822669_5822772_5823026_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ES.4233.32	chr11	-	3984	6	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-14	-5	intron_retention	FALSE	canonical	3	295	junction_5	911.264923060248	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGGTCTGAACCTTGTT	9571	False	NA	-11	True	AATAAA	-12	NA	5828226	5822192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823770_5824023_5824223_5824314_5826990_5828187
ES.4233.6	chr11	-	1896	10	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	1	-4	intron_retention	FALSE	canonical	3	295	junction_9	740.170400801209	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTTGTTCACTTGGGC	9586	False	NA	-2	True	AATAAA	-21	NA	5828211	5822183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824885_5825053_5825176_5826712_5826990_5828187
ES.4233.7	chr11	-	1586	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	787.109782685999	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTTGTTCACTTGGGC	9599	False	NA	-2	True	AATAAA	-21	NA	5828198	5822183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828153
ES.4233.8	chr11	-	1577	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	853.126373991568	962	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACCTTGTTCACTTGG	9580	False	NA	-4	True	AATAAA	-19	NA	5828217	5822185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822784_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ES.4233.9	chr11	-	1546	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_7	977.897417932985	962	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAACCTTGTTCACTTGG	9570	False	NA	-4	True	AATAAA	-19	NA	5828227	5822185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824397_5824760_5824885_5825053_5825176_5826712_5826990_5828187
ES.4234.1	chr11	-	734	6	ISM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	75	2	75	-2	3prime_fragment	FALSE	canonical	3	38	junction_4	23.9115035077261	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGGTGTTGGCTTGAC	NA	False	NA	0	True	AATAAA	-18	NA	5848707	5846638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425
ES.4235.1	chr11	-	2723	10	FSM	ENSMUSG00000041798.16	ENSMUST00000102920.4	2727	10	7	-3	7	0	multi-exon	FALSE	canonical	1	1	junction_2	1.4142135623731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCTGATTGTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	5900074	5850819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5851815_5852084_5852319_5853099_5853256_5854360_5854545_5856476_5856577_5856682_5856779_5859082_5859203_5860277_5860433_5860861_5861025_5899554
ES.4235.2	chr11	-	3189	10	NNC	ENSMUSG00000041798.16	novel	2727	10	NA	NA	339	0	intron_retention	FALSE	canonical	0	0	junction_3	1.68508343201146	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGGCCTGCTGATTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	5899742	5850822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5851815_5852084_5852319_5853099_5853256_5853559_5854545_5856476_5856577_5856682_5856779_5859082_5859203_5860277_5860433_5860861_5861025_5899554
ES.4235.3	chr11	-	1160	2	FSM	ENSMUSG00000041798.16	ENSMUST00000125434.2	394	2	-22	-744	-22	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATGGCCTGCTGATT	NA	False	NA	NA	False	ATTAAA	-14	NA	5852109	5850824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5851815_5851939
ES.4236.1	chr11	+	1029	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	27	1485	27	-1485	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTGAAGGGCTTATTC	NA	False	NA	25	True	CATAAA	-18	NA	5905719	5916295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ES.4236.2	chr11	+	2512	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	27	2	27	-2	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGTCTTGTGTTTACT	NA	False	NA	17	True	GATAAA	-18	NA	5905719	5917778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ES.4236.4	chr11	+	4246	6	NIC	ENSMUSG00000002741.10	novel	2541	7	NA	NA	97	0	intron_retention	FALSE	canonical	3	192	junction_4	16.5336021483523	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	19	True	GATAAA	-20	NA	5905789	5917780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5914663_5916008
ES.4236.5	chr11	+	2357	8	NNC	ENSMUSG00000002741.10	novel	2541	7	NA	NA	144	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	75.8978905893857	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGTCTTGTGTTTA	NA	False	NA	15	True	GATAAA	-16	NA	5905836	5917776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008_5917083_5917118
ES.4237.1	chr11	+	11316	2	Antisense	novelGene_ENSMUSG00000057897.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCCA	NA	False	NA	NA	False	NA	NA	NA	6003355	6014728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6007060_6007116
ES.4238.1	chr11	-	7419	12	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	4075	16	intron_retention	FALSE	canonical	3	94	junction_4	20.1108498326584	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAGCTGAGTGTTTTAT	3667	False	NA	NA	False	NA	NA	NA	5946373	5919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5940423_5942819
ES.4238.10	chr11	-	4467	5	NIC	ENSMUSG00000057897.15	novel	2223	24	NA	NA	4664	1	intron_retention	FALSE	canonical	3	14	junction_4	57.9282961945197	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	NA	False	NA	NA	False	NA	NA	NA	5929474	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922889_5926764_5926894_5927811
ES.4238.11	chr11	-	6328	3	ISM	ENSMUSG00000057897.15	ENSMUST00000155755.2	3328	8	7597	-25	7597	1	3prime_fragment	FALSE	canonical	3	131	junction_2	7.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	NA	False	NA	NA	False	NA	NA	NA	5926541	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_5921827_5922216_5922451_5922631
ES.4238.12	chr11	-	4149	22	NIC	ENSMUSG00000057897.15	novel	2223	24	NA	NA	-29	1	intron_retention	FALSE	canonical	2	4	junction_7	52.0069766818142	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2935	False	NA	NA	False	NA	NA	NA	6015687	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.14	chr11	-	4037	18	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-44	1	intron_retention	FALSE	canonical	3	94	junction_3	16.6009546563362	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2830	False	NA	NA	False	NA	NA	NA	6015792	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.15	chr11	-	4294	20	NNC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-264	1	intron_retention	FALSE	canonical	0	0	junction_6	43.1852929720973	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2610	False	NA	NA	False	NA	NA	NA	6016012	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932506_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.16	chr11	-	4444	21	NNC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	26423	1	intron_retention	FALSE	canonical	2	5	junction_20	47.4976578369923	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	549	False	NA	NA	False	NA	NA	NA	5989115	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.17	chr11	-	4081	19	NNC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_6	44.3674332794052	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2961	False	NA	NA	False	NA	NA	NA	6015661	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932441_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.19	chr11	-	3710	18	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-15	1	intron_retention	FALSE	canonical	0	0	junction_2	35.1776509737032	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2995	False	NA	NA	False	NA	NA	NA	6015627	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922470_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.2	chr11	-	4077	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	-161	-2044	-155	16	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAGCTGAGTGTTTTAT	2719	False	NA	NA	False	NA	NA	NA	6015903	5919627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.20	chr11	-	6206	4	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-3981	1	intron_retention	FALSE	canonical	3	94	junction_1	12.4721912892465	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	NA	False	NA	NA	False	NA	NA	NA	5938119	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5922889_5929672_5932573_5932720_5932762_5938100
ES.4238.21	chr11	-	4057	20	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-57	1	intron_retention	FALSE	canonical	0	0	junction_14	43.1695106319199	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2817	False	NA	NA	False	NA	NA	NA	6015805	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5943969_5944063_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.22	chr11	-	3790	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	33	1	intron_retention	FALSE	canonical	1	1	junction_3	34.0216434379973	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2913	False	NA	NA	False	NA	NA	NA	6015709	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922649_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.23	chr11	-	4190	17	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	28	1	intron_retention	FALSE	canonical	0	0	junction_12	34.9646584961158	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2908	False	NA	NA	False	NA	NA	NA	6015714	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.25	chr11	-	4152	21	NNC	ENSMUSG00000057897.15	novel	1875	21	NA	NA	247	0	intron_retention	FALSE	non_canonical	0	0	junction_20	48.3996642550338	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	2507	False	NA	NA	False	NA	NA	NA	6016115	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473_6015761_6015898
ES.4238.26	chr11	-	3698	18	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_17	34.6784537675679	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	2959	False	NA	NA	False	NA	NA	NA	6015663	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_6015473
ES.4238.27	chr11	-	2959	10	NNC	ENSMUSG00000057897.15	novel	4004	20	NA	NA	-4159	0	intron_retention	FALSE	canonical	0	0	junction_9	50.6829895734137	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5938297	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938232
ES.4238.28	chr11	-	4110	20	NNC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_19	49.2736718424972	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	2969	False	NA	NA	False	NA	NA	NA	6015653	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015477
ES.4238.29	chr11	-	3792	20	NNC	ENSMUSG00000057897.15	novel	4004	20	NA	NA	26917	0	intron_retention	FALSE	canonical	2	5	junction_19	42.1345950463867	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	1043	False	NA	NA	False	NA	NA	NA	5988621	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.3	chr11	-	4013	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	26603	8	intron_retention	FALSE	canonical	2	5	junction_18	32.9330128189532	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	729	False	NA	NA	False	NA	NA	NA	5988935	5919635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.30	chr11	-	3639	18	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	34.5972377240075	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	3010	False	NA	NA	False	NA	NA	NA	6015612	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.31	chr11	-	4095	22	NIC	ENSMUSG00000057897.15	novel	2223	24	NA	NA	-11	0	intron_retention	FALSE	canonical	2	3	junction_6	48.8889249639117	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	3029	False	NA	NA	False	NA	NA	NA	6015593	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5928398_5928513_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.32	chr11	-	3873	20	NNC	ENSMUSG00000057897.15	novel	4004	20	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_14	43.0274022074331	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	2942	False	NA	NA	False	NA	NA	NA	6015680	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5943200_5943264_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.33	chr11	-	4430	16	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-11	0	intron_retention	FALSE	canonical	1	2	junction_4	36.8115923770398	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	3029	False	NA	NA	False	NA	NA	NA	6015593	5919671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922889_5929672_5929722_5932446_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.34	chr11	-	3329	19	NNC	ENSMUSG00000057897.15	novel	1875	21	NA	NA	4	-605	intron_retention	FALSE	canonical	0	0	junction_11	44.18175842786	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGATTTTCTTTATCTT	2968	False	NA	NA	False	TTTAAA	-16	NA	6015654	5920276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5939858_5939936_5940162_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.35	chr11	-	2274	21	NIC	ENSMUSG00000057897.15	novel	2223	24	NA	NA	2	45	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	47.7269316005125	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTTGTGCTCC	2882	False	NA	2	True	AAAAAG	-45	NA	6015740	5921522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.36	chr11	-	2067	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	-52	-143	-46	39	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCACTGTGTCTGTTG	2828	False	NA	-4	True	AAAAAG	-39	NA	6015794	5921528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.38	chr11	-	2312	18	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	26905	39	intron_retention	FALSE	canonical	2	5	junction_17	33.7114767967835	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCACTGTGTCTGTTG	1031	False	NA	-4	True	AAAAAG	-39	NA	5988633	5921528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.39	chr11	-	1867	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	26804	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	33.9343956757232	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCACTGTGTCTGTTG	930	False	NA	-4	True	AAAAAG	-39	NA	5988734	5921528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988613
ES.4238.4	chr11	-	4088	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-45	8	intron_retention	FALSE	canonical	3	32	junction_5	33.5580697347349	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	2829	False	NA	NA	False	NA	NA	NA	6015793	5919635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.41	chr11	-	2015	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	-3	37	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	33.5580697347349	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTCCACTGTGTCTGT	3007	False	NA	-6	True	AAAAAG	-37	NA	6015615	5921530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.42	chr11	-	1890	20	NNC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	26884	-39	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_19	42.1345950463867	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAGCAAACAAACAAA	1010	False	NA	-82	True	NA	NA	NA	5988654	5921606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.43	chr11	-	2002	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	26596	15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	32.9330128189532	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCACACGCAAACCAACAA	722	False	NA	-129	True	TTTAAA	-21	NA	5988942	5921653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
ES.4238.44	chr11	-	2176	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-211	8	-45	3	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGATGATGACAAC	2829	False	NA	-152	True	AAAACA	-23	NA	6015793	5921676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.45	chr11	-	5742	3	NNC	ENSMUSG00000057897.15	novel	4023	21	NA	NA	0	-11604	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	72	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	3052	False	NA	NA	False	NA	NA	NA	6015570	5973268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5978078_5978125_5978962_6015473
ES.4238.5	chr11	-	3883	19	NNC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-5	8	intron_retention	FALSE	canonical	1	2	junction_5	33.8358875153382	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	2959	False	NA	NA	False	NA	NA	NA	6015663	5919635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932446_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.6	chr11	-	4452	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-446	-2033	-280	8	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	2594	False	NA	NA	False	NA	NA	NA	6016028	5919635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.7	chr11	-	5765	20	NIC	ENSMUSG00000057897.15	novel	1973	21	NA	NA	3	8	intron_retention	FALSE	canonical	3	14	junction_5	36.2466924654021	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCAGTACAGCTGAG	3013	False	NA	NA	False	NA	NA	NA	6015609	5919635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4238.8	chr11	-	4122	21	NNC	ENSMUSG00000057897.15	novel	2223	24	NA	NA	-45	1	intron_retention	FALSE	canonical	0	0	junction_20	53.0975281910561	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	2829	False	NA	NA	False	NA	NA	NA	6015793	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015477
ES.4238.9	chr11	-	3819	18	NIC	ENSMUSG00000057897.15	novel	1872	19	NA	NA	-5	1	intron_retention	FALSE	canonical	3	94	junction_4	16.6548516368349	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAATTGCTTCCAGTAC	3035	False	NA	NA	False	NA	NA	NA	6015587	5919642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ES.4239.1	chr11	+	190	1	Intergenic	novelGene_3256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATGCATCTGTACTAA	NA	False	NA	NA	False	NA	NA	NA	6023941	6024131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6023900_6024100
ES.424.1	chr1	-	3862	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	48780874	48777012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_48777000_48780900
ES.4240.1	chr11	-	3225	1	Intergenic	novelGene_3257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCATTGGCT	NA	False	NA	NA	False	NA	NA	NA	6050143	6046918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6046900_6050100
ES.4241.1	chr11	+	2040	1	Antisense	novelGene_ENSMUSG00000053838.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGGTATATTACCACT	NA	False	NA	NA	False	NA	NA	NA	6057930	6059970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6057900_6060000
ES.4242.1	chr11	+	172	1	Intergenic	novelGene_3259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTTAAAATCACTT	NA	False	NA	NA	False	NA	NA	NA	6101993	6102165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6102000_6102200
ES.4243.1	chr11	-	4717	2	ISM	ENSMUSG00000053838.15	ENSMUST00000109805.8	2635	3	5252	-1432	5252	1137	3prime_fragment	FALSE	canonical	3	350	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGCCTGCATTACTT	2246	False	NA	NA	False	AATATA	-31	NA	6064157	6054553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6058356_6063242
ES.4243.11	chr11	-	5438	2	ISM	ENSMUSG00000053838.15	ENSMUST00000109805.8	2635	3	3100	-1	3100	1	3prime_fragment	FALSE	canonical	3	350	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	94	False	NA	-5	True	AATAAA	-15	NA	6066309	6055984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6058356_6063242
ES.4243.12	chr11	-	3362	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	229	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	141.76402928811	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9687	False	NA	-5	True	AATAAA	-15	NA	6150186	6055984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6075417_6075562_6100536_6100628_6143153_6143477_6149942
ES.4243.13	chr11	-	3588	7	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	234	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	165.375750607182	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9692	False	NA	-5	True	AATAAA	-15	NA	6150181	6055984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6069333_6069523_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.14	chr11	-	3337	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	458	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	145.51343580577	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTCTGTCTGTGAC	9916	False	NA	-5	True	AATAAA	-15	NA	6149957	6055984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149780
ES.4243.15	chr11	-	4522	2	NNC	ENSMUSG00000053838.15	novel	2635	3	NA	NA	8862	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	5856	False	NA	-6	True	AATAAA	-14	NA	6060547	6055985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6059108_6059147
ES.4243.16	chr11	-	3394	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.293499500153	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9689	False	NA	-6	True	AATAAA	-14	NA	6150184	6055985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100621_6143153_6143477_6149942
ES.4243.17	chr11	-	8288	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	231	0	intron_retention	FALSE	canonical	3	343	junction_4	16.5755844542508	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9689	False	NA	-6	True	AATAAA	-14	NA	6150184	6055985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.18	chr11	-	3268	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	231	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	149.844085635703	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	9689	False	NA	-6	True	AATAAA	-14	NA	6150184	6055985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6058356_6063242_6063432_6075417_6075562_6143153_6143477_6149942
ES.4243.2	chr11	-	3736	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	177	14	177	-14	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGGGAGGAAAGGGTTT	9635	False	NA	NA	False	NA	NA	NA	6150238	6055704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.20	chr11	-	8131	4	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	254	-1	intron_retention	FALSE	canonical	0	0	junction_2	162.165210682056	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGTTCTGTCTGTG	9712	False	NA	-7	True	AATAAA	-13	NA	6150161	6055986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6063432_6075417_6075562_6143153_6143477_6149942
ES.4243.21	chr11	-	3164	7	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	210	25	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	165.375750607182	595	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCATTTTTTTCTTT	9668	False	NA	-9	True	NA	NA	NA	6150205	6056432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6069333_6069523_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.22	chr11	-	2946	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	233	748	233	19	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTGTTGCATTTTT	9691	False	NA	-15	True	NA	NA	NA	6150182	6056438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.23	chr11	-	1170	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	243	2514	243	-1747	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTTGTCCTCCTCACTC	9701	False	NA	NA	False	AGTAAA	-27	NA	6150172	6058204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.24	chr11	-	1204	5	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	263	7347	263	-6580	5prime_fragment	FALSE	canonical	3	343	junction_4	16.5755844542508	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTAATGGCACAGCCTT	9721	False	NA	NA	False	GATAAA	-29	NA	6150152	6063037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.25	chr11	-	156	1	Intergenic	novelGene_3258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAAAATT	1594	False	NA	NA	False	NA	NA	NA	6064809	6064653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6064700_6064800
ES.4243.26	chr11	-	3601	4	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	-10	17209	-10	25	5prime_fragment	FALSE	canonical	3	343	junction_3	16.1107279647928	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAACAAAAAAACTGGG	9448	False	NA	NA	False	NA	NA	NA	6150425	6072899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.27	chr11	-	3413	5	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	230	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.948197006768	542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CATGCAAAAAAAAAAAAAAA	9688	False	NA	NA	False	NA	NA	NA	6150185	6072928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6075562_6100494_6100628_6141927_6142009_6143153_6143477_6149942
ES.4243.28	chr11	-	491	1	FSM	ENSMUSG00000083022.2	ENSMUST00000117476.2	393	1	-28	-70	-28	70	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCCCAAACAAACCCCCC	NA	False	NA	19	True	NA	NA	NA	6123064	6122573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6122600_6123100
ES.4243.29	chr11	-	3494	1	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	231	-73766	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACATAAT	9689	False	NA	NA	False	NA	NA	NA	6150184	6146690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6146700_6150200
ES.4243.3	chr11	-	3497	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	269	-17	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	148.998951338592	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTGGGGAGGAAAGGG	9727	False	NA	NA	False	NA	NA	NA	6150146	6055707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6058356_6063242_6063432_6100494_6100628_6143153_6143477_6149942
ES.4243.4	chr11	-	3664	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	232	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.363819432485	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATCTTGGGGAGGAA	9690	False	NA	NA	False	NA	NA	NA	6150183	6055711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6075427_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.5	chr11	-	3870	7	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	225	-21	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	165.375750607182	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATCTTGGGGAGGAA	9683	False	NA	NA	False	NA	NA	NA	6150190	6055711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063242_6063432_6069333_6069523_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.6	chr11	-	3665	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	-28	290	-28	5	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTGTCTGTGACAGTC	9430	False	NA	-1	True	AATAAA	-19	NA	6150443	6055980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.7	chr11	-	3450	6	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	225	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	144.164350655771	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCTGTGACAGT	9683	False	NA	-2	True	AATAAA	-18	NA	6150190	6055981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6063203_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.8	chr11	-	3497	7	NNC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	244	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.479389435269	596	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTCTGTCTGTGACAG	9702	False	NA	-3	True	AATAAA	-17	NA	6150171	6055982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6058356_6062830_6062937_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ES.4243.9	chr11	-	3297	5	NIC	ENSMUSG00000053838.15	novel	3927	6	NA	NA	194	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	148.998951338592	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTCTGTCTGTGACAG	9652	False	NA	-3	True	AATAAA	-17	NA	6150221	6055982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6058356_6063242_6063432_6100494_6100628_6143153_6143477_6149942
ES.4244.1	chr11	-	6114	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	25	3576	intron_retention	FALSE	canonical	3	36	junction_10	304.439520245981	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCACTGTGTCTC	4540	False	NA	NA	False	NA	NA	NA	6217721	6205342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6216407_6216511_6216918_6217417_6217580_6217659
ES.4244.10	chr11	-	2770	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	937	junction_7	76.2727814497586	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4519	False	NA	-2	True	NA	NA	NA	6217742	6208918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216972_6217417_6217580_6217659
ES.4244.11	chr11	-	2861	12	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-1	0	intron_retention	FALSE	canonical	2	14	junction_5	305.492178417681	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4514	False	NA	-2	True	NA	NA	NA	6217747	6208918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212861_6213938_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.12	chr11	-	3218	11	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	937	junction_7	76.4418733417752	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4517	False	NA	-2	True	NA	NA	NA	6217744	6208918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6217580_6217659
ES.4244.14	chr11	-	1962	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	-10	4	-10	-4	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4479	False	NA	-6	True	NA	NA	NA	6217782	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.15	chr11	-	2786	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-4	intron_retention	FALSE	canonical	3	937	junction_6	68.6821641288442	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4518	False	NA	-6	True	NA	NA	NA	6217743	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216972_6217417_6217580_6217659
ES.4244.17	chr11	-	1995	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	5	-4	intron_retention	FALSE	canonical	3	36	junction_11	291.479082535189	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4520	False	NA	-6	True	NA	NA	NA	6217741	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216918_6217417_6217580_6217659
ES.4244.18	chr11	-	1955	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	376.946137442134	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4512	False	NA	-6	True	NA	NA	NA	6217749	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217398_6217580_6217652
ES.4244.19	chr11	-	2581	12	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	13	-4	intron_retention	FALSE	canonical	1	2	junction_10	311.759045545336	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4528	False	NA	-6	True	NA	NA	NA	6217733	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214238_6214675_6214796_6215511_6216407_6216511_6216683_6216810_6216972_6217398_6217580_6217659
ES.4244.2	chr11	-	5576	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	3576	intron_retention	FALSE	canonical	3	36	junction_11	291.479082535189	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCACTGTGTCTC	4519	False	NA	NA	False	NA	NA	NA	6217742	6205342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216918_6217417_6217580_6217659
ES.4244.20	chr11	-	3318	11	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	11	-4	intron_retention	FALSE	canonical	3	937	junction_7	74.4693896846214	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4526	False	NA	-6	True	NA	NA	NA	6217735	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6216972_6217417_6217580_6217659
ES.4244.21	chr11	-	3052	11	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-7	-4	intron_retention	FALSE	canonical	0	0	junction_5	324.270936101279	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4482	False	NA	-6	True	NA	NA	NA	6217779	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212735_6213938_6214238_6214675_6214796_6215511_6216407_6216511_6216683_6216810_6217580_6217659
ES.4244.23	chr11	-	2031	13	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	19	-4	intron_retention	FALSE	canonical	3	71	junction_11	282.137217896225	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGTGGTGTTGTCTGGC	4534	False	NA	-6	True	NA	NA	NA	6217727	6208922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216968_6217417_6217580_6217659
ES.4244.24	chr11	-	1914	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	382.724737705928	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4533	False	NA	-8	True	NA	NA	NA	6217728	6208924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209633_6211615_6211722_6212456_6212547_6212662_6212733_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.25	chr11	-	4955	8	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	1028	junction_7	50.3570921985561	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4506	False	NA	-8	True	NA	NA	NA	6217755	6208924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6212547_6212662_6212737_6213938_6214034_6214123_6216407_6216511_6217580_6217659
ES.4244.26	chr11	-	3063	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	23	-6	intron_retention	FALSE	canonical	3	937	junction_7	75.045881282857	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4538	False	NA	-8	True	NA	NA	NA	6217723	6208924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6217580_6217659
ES.4244.27	chr11	-	3825	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	17	-6	intron_retention	FALSE	canonical	3	937	junction_6	76.5246138763576	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGGTGGTGTTGTCTG	4532	False	NA	-8	True	NA	NA	NA	6217729	6208924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.28	chr11	-	2023	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-8	intron_retention	FALSE	canonical	3	937	junction_7	78.0218541321739	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAAAGGTGGTGTTGTC	4519	False	NA	-10	True	NA	NA	NA	6217742	6208926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.30	chr11	-	1930	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	23	-47	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_5	375.586011548628	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGGAAAAGATTGCTT	4538	False	NA	-8	True	AATAAA	-33	NA	6217723	6208965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212861_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
ES.4244.31	chr11	-	1829	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	-47	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGGAAAAGATTGCTT	4515	False	NA	-8	True	AATAAA	-33	NA	6217746	6208965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
ES.4244.32	chr11	-	3200	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	13	-47	intron_retention	FALSE	canonical	3	937	junction_6	78.8027142209901	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGGAAAAGATTGCTT	4528	False	NA	-8	True	AATAAA	-33	NA	6217733	6208965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216972_6217417_6217580_6217659
ES.4244.33	chr11	-	3215	11	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	16	-48	intron_retention	FALSE	canonical	3	36	junction_9	319.298747257173	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGGAAAAGATTGCT	4531	False	NA	-9	True	AATAAA	-32	NA	6217730	6208966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6216918_6217417_6217580_6217659
ES.4244.35	chr11	-	1887	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	2	-48	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_13	274.883019766978	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGGAAAAGATTGCT	4517	False	NA	-9	True	AATAAA	-32	NA	6217744	6208966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217652
ES.4244.36	chr11	-	3729	10	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	2	-48	intron_retention	FALSE	canonical	3	937	junction_7	73.3057187063992	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGGAAAAGATTGCT	4517	False	NA	-9	True	AATAAA	-32	NA	6217744	6208966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6217580_6217659
ES.4244.37	chr11	-	3872	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-49	intron_retention	FALSE	canonical	3	937	junction_6	78.0218541321739	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGTGGGAAAAGATTGC	4519	False	NA	-10	True	AATAAA	-31	NA	6217742	6208967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.38	chr11	-	3151	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-50	intron_retention	FALSE	canonical	3	937	junction_7	73.3416098510061	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGTGGGAAAAGATTG	4519	False	NA	-11	True	AATAAA	-30	NA	6217742	6208968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.39	chr11	-	3009	11	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-50	intron_retention	FALSE	canonical	3	937	junction_7	76.3178222959749	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGTGGGAAAAGATTG	4519	False	NA	-11	True	AATAAA	-30	NA	6217742	6208968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6216407_6216511_6217580_6217659
ES.4244.4	chr11	-	5449	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	3576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	289.441473987239	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCACTGTGTCTC	4519	False	NA	NA	False	NA	NA	NA	6217742	6205342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216915_6217413_6217580_6217659
ES.4244.40	chr11	-	2881	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-50	intron_retention	FALSE	canonical	3	937	junction_7	74.9378806106313	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATGTGGGAAAAGATTG	4519	False	NA	-11	True	AATAAA	-30	NA	6217742	6208968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6216407_6216511_6216683_6216810_6217580_6217659
ES.4244.41	chr11	-	4866	11	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-53	intron_retention	FALSE	non_canonical	0	0	junction_9	327.75606783094	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGAATGTGGGAAAAGA	4519	False	NA	-14	True	AATAAA	-27	NA	6217742	6208971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216962_6217413_6217580_6217659
ES.4244.42	chr11	-	2056	13	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	-62	intron_retention	FALSE	canonical	0	0	junction_2	300.193675908663	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACCCTCTGGAATGT	4515	False	NA	-23	True	AATAAA	-18	NA	6217746	6208980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209681_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216972_6217417_6217580_6217659
ES.4244.43	chr11	-	1645	12	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-655	-62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	314.131545851692	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACCCTCTGGAATGT	5214	False	NA	-23	True	AATAAA	-18	NA	6217047	6208980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214746_6215511_6215757_6216315_6216407_6216511_6216683_6216810
ES.4244.44	chr11	-	3259	11	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	18	-63	intron_retention	FALSE	canonical	3	55	junction_10	313.251719867585	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGACCCTCTGGAATG	4533	False	NA	-24	True	AATAAA	-17	NA	6217728	6208981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6216972_6217417_6217580_6217652
ES.4244.45	chr11	-	3586	11	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	2	-63	intron_retention	FALSE	canonical	3	937	junction_7	72.8906715567911	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGACCCTCTGGAATG	4517	False	NA	-24	True	AATAAA	-17	NA	6217744	6208981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6216407_6216511_6216683_6216810_6217580_6217659
ES.4244.46	chr11	-	4341	10	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	17	-64	intron_retention	FALSE	canonical	3	937	junction_6	79.6436507896964	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGTGACCCTCTGGAAT	4532	False	NA	-25	True	AATAAA	-16	NA	6217729	6208982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6217580_6217659
ES.4244.47	chr11	-	1919	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	385.282621233883	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGTGACCCTCTGGAAT	4518	False	NA	-25	True	AATAAA	-16	NA	6217743	6208982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209681_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217663
ES.4244.48	chr11	-	1940	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	3	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	287.13372345987	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGACCCTCTGGAA	4518	False	NA	-26	True	AATAAA	-15	NA	6217743	6208983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212815_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.5	chr11	-	5515	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	17	-3576	-9	3576	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTTTCACTGTGTCTC	4506	False	NA	NA	False	NA	NA	NA	6217755	6205342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.50	chr11	-	1879	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	289.441473987239	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTGTGACCCTCTGGA	4515	False	NA	-27	True	AATAAA	-14	NA	6217746	6208984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216968_6217398_6217580_6217659
ES.4244.51	chr11	-	1822	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	19	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	369.392961171858	533	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTGTGACCCTCTGGA	4534	False	NA	-27	True	AATAAA	-14	NA	6217727	6208984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212486_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217652
ES.4244.52	chr11	-	4571	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-66	intron_retention	FALSE	canonical	3	937	junction_6	77.905325038931	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTGTGACCCTCTGGA	4519	False	NA	-27	True	AATAAA	-14	NA	6217742	6208984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.53	chr11	-	1948	14	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	-67	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	286.61852263033	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTGTGACCCTCTGG	4519	False	NA	-28	True	AATAAA	-13	NA	6217742	6208985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212826_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.55	chr11	-	1069	6	ISM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	51	6416	25	-28	5prime_fragment	FALSE	canonical	3	969	junction_1	28.6872794109166	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGGTCTTATTTCTTC	4540	False	NA	NA	False	NA	NA	NA	6217721	6215334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.6	chr11	-	6212	13	NNC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	4	3574	intron_retention	FALSE	canonical	3	71	junction_11	282.241954417364	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTAGTTTCACTGTGTC	4519	False	NA	NA	False	NA	NA	NA	6217742	6205344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216968_6217417_6217580_6217659
ES.4244.7	chr11	-	6239	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	3574	intron_retention	FALSE	canonical	3	937	junction_6	66.4991645728643	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTAGTTTCACTGTGTC	4515	False	NA	NA	False	NA	NA	NA	6217746	6205344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.8	chr11	-	2246	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	59	-349	33	349	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGACCCCTCCTCCATGT	4548	False	NA	NA	False	AATATA	-15	NA	6217713	6208569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4244.9	chr11	-	2676	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	937	junction_7	74.5961348417821	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4485	False	NA	-2	True	NA	NA	NA	6217776	6208918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ES.4245.1	chr11	-	2833	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	29	-859	24	859	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTGTTGATTCC	5367	False	NA	NA	False	AATAAA	-32	NA	6224841	6219509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ES.4245.10	chr11	-	1675	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	-17	345	-17	-345	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5321	False	NA	-1	True	AATAAA	-16	NA	6224887	6220713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ES.4245.12	chr11	-	1531	5	NNC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	-28	-347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	219.177296953859	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGATGTGAAATAATAG	5310	False	NA	-3	True	AATAAA	-14	NA	6224898	6220715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224826
ES.4245.13	chr11	-	1937	3	NIC	ENSMUSG00000004394.13	novel	886	4	NA	NA	25	-431	intron_retention	FALSE	canonical	3	480	junction_1	38	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATAAATATTTTCTTC	5368	False	NA	-87	True	NA	NA	NA	6224840	6220799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6221801_6223740_6224234_6224397
ES.4245.14	chr11	-	1357	4	FSM	ENSMUSG00000004394.13	ENSMUST00000130621.2	886	4	33	-504	28	504	multi-exon	FALSE	canonical	3	463	junction_2	40.4337592722825	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCTGATTGAATCATC	5371	False	NA	NA	False	GATAAA	-11	NA	6224837	6221156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397
ES.4245.2	chr11	-	2510	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	32	-539	27	539	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTGTAGATCAACATGA	5370	False	NA	NA	False	AATAAA	-19	NA	6224838	6219829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ES.4245.3	chr11	-	1690	4	NNC	ENSMUSG00000004394.13	novel	886	4	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	222.37555820928	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTCCCTTTGTTTTTT	5361	False	NA	NA	False	ATTAAA	-26	NA	6224847	6220366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6221801_6223740_6223888_6224107_6224162_6224792
ES.4245.4	chr11	-	4486	1	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	11	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5354	False	NA	NA	False	ATTAAA	-24	NA	6224854	6220368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6220400_6224900
ES.4245.5	chr11	-	1997	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	4	2	-1	-2	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5342	False	NA	NA	False	ATTAAA	-22	NA	6224866	6220370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ES.4245.6	chr11	-	1964	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5368	False	NA	NA	False	ATTAAA	-22	NA	6224840	6220370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
ES.4245.8	chr11	-	4332	2	NIC	ENSMUSG00000004394.13	novel	886	4	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	556	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAATTCTCCCTTTGTT	5342	False	NA	NA	False	ATTAAA	-22	NA	6224866	6220370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6224234_6224397
ES.4245.9	chr11	-	1848	5	NNC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	2	-29	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	217.89504354161	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAATTTCTTTTTCTGAC	5340	False	NA	NA	False	NA	NA	NA	6224868	6220397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224797
ES.4246.1	chr11	+	4177	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-49	-1	-49	1	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTGTCGTGTGTT	NA	False	NA	15	True	CATAAA	-19	NA	6241583	6306643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.100	chr11	+	4533	18	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	44827	-50	44827	0	3prime_fragment	FALSE	canonical	3	535	junction_3	61.8726228091811	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6287431	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.101	chr11	+	4012	15	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	49990	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	245.08669852915	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	27	False	NA	11	True	CATAAA	-15	NA	6292594	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300922_6300976_6301139_6301193_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.102	chr11	+	2370	11	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	55222	-46	55222	-4	3prime_fragment	FALSE	canonical	3	621	junction_1	62.1987942005309	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTGCCTGCTGTCGT	4939	False	NA	10	True	CATAAA	-14	NA	6297826	6306638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.104	chr11	+	2518	7	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	56051	-2	intron_retention	FALSE	canonical	3	625	junction_2	62.6163361716058	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGCCTGCTGTCGTGT	5768	False	NA	12	True	CATAAA	-16	NA	6298655	6306640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.105	chr11	+	2140	9	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	56052	-49	56052	-1	3prime_fragment	FALSE	canonical	3	625	junction_4	62.2188677171162	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	5769	False	NA	13	True	CATAAA	-17	NA	6298656	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.106	chr11	+	4328	6	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	56238	-1	intron_retention	FALSE	canonical	3	639	junction_3	61.9883860089937	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	5955	False	NA	13	True	CATAAA	-17	NA	6298842	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6299228_6299314_6299494_6299841_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.107	chr11	+	1680	6	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	57236	-47	57236	-3	3prime_fragment	FALSE	canonical	3	625	junction_1	67.7536714872338	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	6953	False	NA	11	True	CATAAA	-15	NA	6299840	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.108	chr11	+	2860	3	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	60871	-49	60871	-1	3prime_fragment	FALSE	canonical	3	761	junction_2	16.5	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	1932	False	NA	13	True	CATAAA	-17	NA	6303475	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6305093_6305290_6305446_6305553
ES.4246.11	chr11	+	4105	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-18	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	149.307333215975	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGCTTGACCCATAAACTA	NA	False	NA	-20	True	AAAAAG	-35	NA	6241614	6306608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299105_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.12	chr11	+	4221	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	-51	-64	-18	0	multi-exon	FALSE	canonical	3	18	junction_1	146.072267860866	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241614	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.13	chr11	+	3990	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_21	144.188132962026	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241614	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305553
ES.4246.14	chr11	+	5004	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-16	-861	-16	861	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTAGTCTCTTCCTTGA	NA	False	NA	NA	False	AATAAA	-37	NA	6241616	6307503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.15	chr11	+	2959	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	-24	-2156	-16	2156	multi-exon	FALSE	canonical	3	605	junction_1	0	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTTTAATCTCCTGTA	NA	False	NA	NA	False	NA	NA	NA	6241616	6249833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951
ES.4246.16	chr11	+	5662	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-16	1531	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGCAACGTGCTACTA	NA	False	NA	NA	False	NA	NA	NA	6241616	6308173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.17	chr11	+	6200	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-15	-2058	-15	2058	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTTCCCTTGTGCCCAG	NA	False	NA	NA	False	AAAAAG	-4	NA	6241617	6308700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.2	chr11	+	4156	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241591	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.20	chr11	+	3047	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	-830	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	151.090683226409	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCACTGTCCACACGTCC	NA	False	NA	NA	False	ACTAAA	-11	NA	6241626	6305748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.23	chr11	+	3568	19	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_18	207.147894027432	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTGTCGTGTGTT	NA	False	NA	15	True	CATAAA	-19	NA	6241626	6306643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305553
ES.4246.24	chr11	+	4164	24	FSM	ENSMUSG00000020456.18	ENSMUST00000093350.10	4075	24	-41	-48	-6	-2	multi-exon	FALSE	canonical	0	0	junction_4	222.742486968574	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGCCTGCTGTCGTGT	NA	False	NA	12	True	CATAAA	-16	NA	6241626	6306640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6274877_6274923_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.25	chr11	+	3757	21	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	156.183633905733	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAATGA	NA	False	NA	-67	True	NA	NA	NA	6241626	6306561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.26	chr11	+	6311	25	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	2589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	224.167251393289	835	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGGCGTGTTGGCAC	NA	False	NA	NA	False	NA	NA	NA	6241626	6309231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289839_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.27	chr11	+	3977	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	152.518375533191	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241626	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.28	chr11	+	5670	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-6	-1537	-6	1537	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACGTGCTACTACACCAG	NA	False	NA	NA	False	NA	NA	NA	6241626	6308179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.29	chr11	+	3474	19	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	164.42864038171	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241626	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.30	chr11	+	4000	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	1	6	junction_13	151.890983103999	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241627	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.32	chr11	+	3737	20	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	158.690887526454	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGCCTGCTGTCGTGT	NA	False	NA	12	True	CATAAA	-16	NA	6241627	6306640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.33	chr11	+	6102	24	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-5	2033	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	146.301447093151	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6241627	6308675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307986_6308048
ES.4246.34	chr11	+	3669	24	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	146.301447093151	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241627	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6305994_6306455
ES.4246.35	chr11	+	6634	25	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-5	2911	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	190.404061398969	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGAGGAATACTGCTTG	NA	False	NA	NA	False	NA	NA	NA	6241627	6309553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.37	chr11	+	6648	19	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	535	junction_8	59.1903447665263	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241628	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.38	chr11	+	4429	22	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_18	152.85640112563	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241629	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300732_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.40	chr11	+	4180	24	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	194.435959007097	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241633	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300061_6300119_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.41	chr11	+	4171	24	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	194.293290665765	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCTGTCGTGTGTT	NA	False	NA	15	True	CATAAA	-19	NA	6241634	6306643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6274877_6274923_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.42	chr11	+	4048	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	149.177940229914	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241634	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284606_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.43	chr11	+	4086	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	149.489185324309	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCAGCCTGCCTGCTGTCG	NA	False	NA	9	True	CATAAA	-13	NA	6241635	6306637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289870_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.45	chr11	+	4115	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	149.588222676909	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241635	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299905_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.46	chr11	+	4185	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	218.875544847366	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241637	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241770_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.47	chr11	+	6276	25	NNC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	1	2579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	241.552009438731	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGAGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	6241641	6309221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.48	chr11	+	3071	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	1	-828	combination_of_known_splicesites	FALSE	canonical	1	5	junction_21	144.188132962026	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTCCACACGTCCCT	NA	False	NA	NA	False	ACTAAA	-13	NA	6241641	6305750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305553
ES.4246.49	chr11	+	6160	25	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	1	2451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	190.404061398969	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTGGGGCTGACTGGA	NA	False	NA	NA	False	NA	NA	NA	6241641	6309093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.5	chr11	+	4280	24	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.026125346189	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241612	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6242377_6242514_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.50	chr11	+	6002	25	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	2	2294	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	190.404061398969	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGCTTAGCACTGACT	NA	False	NA	NA	False	TATAAA	-18	NA	6241642	6308936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.53	chr11	+	4040	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	149.014122410213	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241644	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297169_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.56	chr11	+	4473	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	4	1298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	194.718147651402	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCACCTCTTTTGTCTA	NA	False	NA	NA	False	AAAAAG	-22	NA	6241644	6307940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289115_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305315_6306355
ES.4246.58	chr11	+	786	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	7	-14	7	14	multi-exon	FALSE	canonical	3	605	junction_1	0	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTTGTCTTTGAT	NA	False	NA	NA	False	TATAAA	-26	NA	6241647	6247691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951
ES.4246.59	chr11	+	3671	21	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	156.534173585195	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241647	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.6	chr11	+	3736	20	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	157.66848702437	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241612	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.60	chr11	+	6691	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	7	2591	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCGTGTTGGCACAT	NA	False	NA	NA	False	NA	NA	NA	6241647	6309233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.61	chr11	+	6132	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	8	2033	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6241648	6308675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.63	chr11	+	4178	24	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	184.37924260602	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241649	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266834_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.64	chr11	+	4103	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	149.497014813061	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241649	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247189_6263783_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.66	chr11	+	3282	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	-6	830	-6	-830	multi-exon	FALSE	canonical	3	18	junction_1	146.072267860866	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCACTGTCCACACGTCC	NA	False	NA	NA	False	ACTAAA	-11	NA	6241659	6305748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.67	chr11	+	4689	22	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-3	840	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	151.960983774024	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGATAGGGTCCTTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	6241662	6307482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.68	chr11	+	4079	23	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	149.265668086876	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241662	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292600_6296505_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.69	chr11	+	3993	24	NNC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	216.201963971081	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241671	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6305830_6305909
ES.4246.7	chr11	+	3260	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	-20	887	-20	-823	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCACACGTCCCTTCGCT	NA	False	NA	NA	False	ACTAAA	-18	NA	6241612	6305755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.70	chr11	+	4232	24	NNC	ENSMUSG00000020456.18	novel	4106	23	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	219.871237451835	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241672	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241770_6246951_6247200_6263787_6263980_6266764_6266834_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.71	chr11	+	4863	20	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-53	-830	intron_retention	FALSE	canonical	3	55	junction_1	149.04722336308	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCACTGTCCACACGTCC	NA	False	NA	NA	False	ACTAAA	-11	NA	6241931	6305748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6299228_6299314_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.72	chr11	+	4402	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241955	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.73	chr11	+	4378	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-18	-1	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	214.633615361097	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241966	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.75	chr11	+	4282	23	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	220.17292696559	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241976	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242205_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.76	chr11	+	4293	23	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	148.169108490076	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241977	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242205_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.77	chr11	+	5906	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-2	1531	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAGCAACGTGCTACTA	NA	False	NA	NA	False	NA	NA	NA	6241982	6308173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.78	chr11	+	4549	23	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	251.185667722945	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241982	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242489_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284638_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.79	chr11	+	3988	21	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	207.184332177894	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6241984	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242205_6246951_6247200_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.8	chr11	+	3249	23	NIC	ENSMUSG00000020456.18	novel	4075	24	NA	NA	-19	-821	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	180.942853176638	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACACGTCCCTTCGCTGT	NA	False	NA	NA	False	ACTAAA	-20	NA	6241613	6305757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.80	chr11	+	6412	25	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	1	2449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	219.503602697592	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAAGTGGGGCTGACTG	NA	False	NA	NA	False	NA	NA	NA	6241985	6309091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.81	chr11	+	4593	23	NIC	ENSMUSG00000020456.18	novel	621	3	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	147.405951246244	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241985	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242514_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.82	chr11	+	4212	22	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	7	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	195.002052434108	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241991	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.85	chr11	+	8312	3	NNC	ENSMUSG00000020456.18	novel	621	3	NA	NA	-50	7680	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.5	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTGTGTTCAATTGG	NA	False	NA	NA	False	CATAAA	-19	NA	6242121	6255357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242514_6246951_6253231_6253716
ES.4246.86	chr11	+	4418	23	NIC	ENSMUSG00000020456.18	novel	621	3	NA	NA	-26	-4	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	219.699273237662	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCTGCCTGCTGTCGT	NA	False	NA	10	True	CATAAA	-14	NA	6242145	6306638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242514_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.87	chr11	+	5796	24	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-23	1542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	224.112144490495	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTACTACACCAGCTTAG	NA	False	NA	NA	False	NA	NA	NA	6242148	6308184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6274877_6274923_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.88	chr11	+	6230	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	-11	2033	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6242160	6308675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.89	chr11	+	4373	23	NNC	ENSMUSG00000020456.18	novel	621	3	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.506433151617	828	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTGCCTGCTGTCGTG	NA	False	NA	11	True	CATAAA	-15	NA	6242178	6306639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6242489_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.9	chr11	+	3610	20	NNC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.125470194426	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	NA	False	NA	13	True	CATAAA	-17	NA	6241613	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6241702_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.90	chr11	+	4207	23	FSM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	-43	-50	-43	0	multi-exon	FALSE	canonical	3	11	junction_1	219.699273237662	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	200	False	NA	14	True	CATAAA	-18	NA	6242561	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6242715_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.91	chr11	+	4216	23	NIC	ENSMUSG00000020456.18	novel	4114	23	NA	NA	-41	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	147.405951246244	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	202	False	NA	13	True	CATAAA	-17	NA	6242563	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6242715_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.92	chr11	+	4058	22	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	4343	-50	4343	0	3prime_fragment	FALSE	canonical	3	61	junction_3	185.19871046602	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	4586	False	NA	14	True	CATAAA	-18	NA	6246947	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.93	chr11	+	4069	22	ISM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	5315	1	4343	-1	3prime_fragment	FALSE	canonical	3	535	junction_7	60.7048171888523	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGCCTGCTGTCGTGTG	4586	False	NA	13	True	CATAAA	-17	NA	6246947	6306641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.94	chr11	+	178	1	Intergenic	novelGene_3262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTACAGG	NA	False	NA	13	True	NA	NA	NA	6259932	6260110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6259900_6260100
ES.4246.95	chr11	+	5842	23	NNC	ENSMUSG00000020456.18	novel	4114	23	NA	NA	21187	2449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	251.222268318662	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAAGTGGGGCTGACTG	NA	False	NA	NA	False	NA	NA	NA	6263791	6309091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553_6307982_6308176_6308484_6308697
ES.4246.96	chr11	+	5669	20	ISM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	24157	-2102	24157	2052	3prime_fragment	FALSE	canonical	3	61	junction_1	147.533873287842	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGCCCTTCCCTTGT	NA	False	NA	NA	False	NA	NA	NA	6266761	6308694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.98	chr11	+	4989	19	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	24401	0	intron_retention	FALSE	canonical	3	535	junction_5	63.673647086792	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6267005	6306642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6302199_6304928_6305093_6305290_6305446_6305553
ES.4246.99	chr11	+	177	1	Intergenic	novelGene_3263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	689	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAGAAAAGAATG	5144	False	NA	NA	False	NA	NA	NA	6278910	6279087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6278900_6279100
ES.4247.1	chr11	-	177	2	Antisense	novelGene_ENSMUSG00000020456.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGTTAAAATG	NA	False	NA	NA	False	NA	NA	NA	6280446	6233497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_6233653_6280424
ES.4247.2	chr11	-	177	1	Intergenic	novelGene_3260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGTTAAAATG	NA	False	NA	NA	False	NA	NA	NA	6233674	6233497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6233500_6233700
ES.4247.3	chr11	-	1258	1	Antisense	novelGene_ENSMUSG00000020456.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTGTTTTGCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	6242482	6241224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_6241200_6242500
ES.4247.4	chr11	-	174	1	Intergenic	novelGene_3261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGCAGTTTGGGAACA	NA	False	NA	NA	False	NA	NA	NA	6254813	6254639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6254600_6254800
ES.4248.1	chr11	-	1065	1	Antisense	novelGene_ENSMUSG00000020456.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6647	False	NA	NA	False	AAGAAA	-20	NA	6285513	6284448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_6284400_6285500
ES.4248.2	chr11	-	181	1	Intergenic	novelGene_3264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAACAAAAAAAAA	7226	False	NA	NA	False	NA	NA	NA	6284934	6284753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6284800_6284900
ES.4249.1	chr11	-	177	1	Intergenic	novelGene_3265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	6302997	6302820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6302800_6303000
ES.425.1	chr1	-	176	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49081598	49081422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_49081400_49081600
ES.4250.1	chr11	-	265	1	Intergenic	novelGene_3266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTACTGATTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	6318882	6318617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6318600_6318900
ES.4251.1	chr11	+	3404	2	Intergenic	novelGene_3267	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	314	False	NA	NA	False	NA	NA	NA	6320911	6324447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6320995_6321126
ES.4252.1	chr11	-	200	1	Intergenic	novelGene_3268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTTCTGTGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	6330811	6330611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6330600_6330800
ES.4253.1	chr11	-	204	1	Intergenic	novelGene_3269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTCCCACTTTATGACT	NA	False	NA	NA	False	NA	NA	NA	6335240	6335036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6335000_6335200
ES.4254.1	chr11	+	4129	20	NNC	ENSMUSG00000041164.16	novel	3806	19	NA	NA	-285	1	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_1	80.6864249361382	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTCAGGATATCCCTG	4338	False	NA	16	True	AATAAA	-19	NA	6338788	6356159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6338868_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.10	chr11	+	5023	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	4	1007	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	82.0795843784869	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATACAGAATACATGCAA	4627	False	NA	NA	False	AATAAA	-14	NA	6339077	6357165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.102	chr11	+	571	4	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_3	17797.2392116181	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365868	6369817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369477
ES.4254.103	chr11	+	713	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16233.0718596327	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365868	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365980_6368100_6368132_6368225_6368308_6369112_6369286_6369477
ES.4254.104	chr11	+	3942	1	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1452	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCCTTGTTTGT	NA	False	NA	-5	True	AATAAA	-12	NA	6365868	6369810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6365900_6369800
ES.4254.106	chr11	+	650	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16404.7920666493	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365868	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369221_6369482
ES.4254.107	chr11	+	764	6	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1	6201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15042.0886528434	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATGCACAGCAGTACACA	NA	False	NA	NA	False	NA	NA	NA	6365868	6376018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477_6369811_6375991
ES.4254.109	chr11	+	2740	2	NNC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	239	-11	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	310	False	NA	-22	True	NA	NA	NA	6366550	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6368018_6368520
ES.4254.11	chr11	+	4323	21	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	4	52885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	116.771775271253	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATTTCATTTTCAGA	4627	False	NA	NA	False	NA	NA	NA	6339077	6409043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6346126_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989_6356069_6408995
ES.4254.110	chr11	+	156	1	Intergenic	novelGene_3271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	8027	False	NA	NA	False	NA	NA	NA	6374267	6374423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6374300_6374400
ES.4254.111	chr11	+	2893	2	Antisense	novelGene_ENSMUSG00000092885.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGGTAAAGTGTCTG	5928	False	NA	NA	False	AATAAA	-18	NA	6401072	6429688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6401250_6426972
ES.4254.112	chr11	+	165	1	Intergenic	novelGene_3274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGTTTCTACTGAGG	2875	False	NA	NA	False	NA	NA	NA	6406749	6406914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6406700_6406900
ES.4254.113	chr11	+	2166	1	Genic_Genomic	ENSMUSG00000086839.8	novel	NA	NA	NA	NA	-275	-13603	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTTCTCTTGTAATTT	8812	False	NA	NA	False	NA	NA	NA	6425149	6427315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_6425100_6427300
ES.4254.14	chr11	+	3449	19	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	17	-248	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	107.167573868633	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGTGTAGAAATGCCAA	4640	False	NA	NA	False	AATAAA	-13	NA	6339090	6355682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.15	chr11	+	3817	20	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	102.983015031808	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4640	False	NA	20	True	ATTAAA	-20	NA	6339090	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.16	chr11	+	3743	20	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	19	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	97.4163466690162	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTCCTTCCTTTGTGC	4642	False	NA	23	True	ATTAAA	-23	NA	6339092	6356077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347095_6347584_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.17	chr11	+	3526	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	19	-247	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	82.0795843784869	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTGTAGAAATGCCAAC	4642	False	NA	NA	False	AATAAA	-14	NA	6339092	6355683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.19	chr11	+	3965	20	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	100.691982532178	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGGCTGAGTCCTTC	4646	False	NA	15	True	ATTAAA	-15	NA	6339096	6356069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349542_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.2	chr11	+	4023	20	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	-7	-4	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	82.0795843784869	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCCAAGCTCAGGATAT	4616	False	NA	11	True	AATAAA	-14	NA	6339066	6356154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.20	chr11	+	4010	19	NIC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	23	-5	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	100.029440110844	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATCCAAGCTCAGGATA	4646	False	NA	10	True	AATAAA	-13	NA	6339096	6356153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.21	chr11	+	4175	21	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.412882346959	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4650	False	NA	20	True	ATTAAA	-20	NA	6339100	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6344310_6344481_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.22	chr11	+	4162	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-54	5	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGATATCCCTGAGCT	4859	False	NA	20	True	AATAAA	-23	NA	6339309	6356163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.23	chr11	+	3852	19	NNC	ENSMUSG00000041164.16	novel	3806	19	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	117.856695258623	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4887	False	NA	20	True	ATTAAA	-20	NA	6339337	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351212_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.24	chr11	+	4134	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.6526692744463	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4887	False	NA	20	True	ATTAAA	-20	NA	6339337	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348718_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.25	chr11	+	4024	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	92.2018440997883	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAAGCTCAGGATATC	4887	False	NA	12	True	AATAAA	-15	NA	6339337	6356155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.26	chr11	+	4305	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	108.242505514239	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4889	False	NA	20	True	ATTAAA	-20	NA	6339339	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6345959_6346126_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.28	chr11	+	4153	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	-20	66	-20	18	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGAGGGTCTGTGGCC	4893	False	NA	38	True	ATTAAA	-38	NA	6339343	6356092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.29	chr11	+	3975	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	-20	52885	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	111.732448286073	2027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATTTCATTTTCAGA	4893	False	NA	NA	False	NA	NA	NA	6339343	6409043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989_6356069_6408999
ES.4254.3	chr11	+	4019	20	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	95.8258172812407	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAAGCTCAGGATATCC	4616	False	NA	13	True	AATAAA	-16	NA	6339066	6356156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.30	chr11	+	4926	18	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-20	0	intron_retention	FALSE	canonical	3	175	junction_1	53.559138481485	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4893	False	NA	20	True	ATTAAA	-20	NA	6339343	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.31	chr11	+	4115	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	83.7621947131156	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4895	False	NA	15	True	AATAAA	-18	NA	6339345	6356158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.32	chr11	+	4113	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.83217912592	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGGCTGAGTCCTTCC	4899	False	NA	16	True	ATTAAA	-16	NA	6339349	6356070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339507_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348335_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.33	chr11	+	4101	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	88.6308601045984	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGAGTCCTTCCTTT	4899	False	NA	19	True	ATTAAA	-19	NA	6339349	6356073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352433_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.34	chr11	+	5221	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	-14	-1008	-14	1008	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACAGAATACATGCAAC	4899	False	NA	NA	False	AATAAA	-15	NA	6339349	6357166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.35	chr11	+	3633	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-13	-249	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	83.7621947131156	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTGTAGAAATGCCA	4900	False	NA	NA	False	AATAAA	-12	NA	6339350	6355681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.38	chr11	+	5115	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	-6	1006	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATACAGAATACATGCA	4907	False	NA	NA	False	AATAAA	-13	NA	6339357	6357164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.39	chr11	+	4177	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	88.6308601045984	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4914	False	NA	20	True	ATTAAA	-20	NA	6339364	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352343_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.4	chr11	+	4121	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	-5	0	-5	0	multi-exon	FALSE	canonical	3	65	junction_1	72.0482679083075	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4618	False	NA	15	True	AATAAA	-18	NA	6339068	6356158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.41	chr11	+	3794	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	1	-240	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	122.699266501475	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGCCAACAGCTGGG	4914	False	NA	NA	False	AATAAA	-21	NA	6339364	6355690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6345959_6346126_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.42	chr11	+	3917	19	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	114.048357190175	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCCTTCCTTTGTGCTG	4914	False	NA	25	True	ATTAAA	-25	NA	6339364	6356079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348678_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354999
ES.4254.43	chr11	+	4471	19	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	1	-2	intron_retention	FALSE	canonical	3	175	junction_1	49.4816339540787	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGAGTCCTTCCTT	4914	False	NA	18	True	ATTAAA	-18	NA	6339364	6356072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.44	chr11	+	3723	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	1	475	1	-247	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTGTAGAAATGCCAAC	4914	False	NA	NA	False	AATAAA	-14	NA	6339364	6355683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.46	chr11	+	5307	19	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	1	1008	intron_retention	FALSE	canonical	1	1	junction_12	90.4746741727577	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACAGAATACATGCAAC	4914	False	NA	NA	False	AATAAA	-15	NA	6339364	6357166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351212_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.47	chr11	+	3817	19	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	99.6750275199917	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGGCTTGGCTGAGTCC	4915	False	NA	12	True	ATTAAA	-12	NA	6339365	6356066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348678_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.48	chr11	+	4023	19	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	96.3757435801005	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4915	False	NA	15	True	AATAAA	-18	NA	6339365	6356158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.49	chr11	+	4120	19	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	111.480884703706	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4916	False	NA	15	True	AATAAA	-18	NA	6339366	6356158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351258_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.5	chr11	+	3646	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	-5	475	-5	-247	multi-exon	FALSE	canonical	3	65	junction_1	72.0482679083075	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTGTAGAAATGCCAAC	4618	False	NA	NA	False	AATAAA	-14	NA	6339068	6355683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.50	chr11	+	4153	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	4	52885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	87.498228553497	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATTTCATTTTCAGA	4917	False	NA	NA	False	NA	NA	NA	6339367	6409043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989_6356069_6408995
ES.4254.51	chr11	+	3616	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	4	-247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	87.498228553497	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTGTAGAAATGCCAAC	4917	False	NA	NA	False	AATAAA	-14	NA	6339367	6355683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989_6355320_6355423
ES.4254.52	chr11	+	5102	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	4	1009	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	83.7621947131156	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACAGAATACATGCAACA	4917	False	NA	NA	False	AATAAA	-16	NA	6339367	6357167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.54	chr11	+	3995	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	89.1316682982474	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGAGTCCTTCCTTT	4917	False	NA	19	True	ATTAAA	-19	NA	6339367	6356073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351212_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.55	chr11	+	3623	20	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	4	-248	combination_of_known_junctions	FALSE	canonical	3	118	junction_4	67.0811721462118	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGTGTAGAAATGCCAA	4917	False	NA	NA	False	AATAAA	-13	NA	6339367	6355682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.57	chr11	+	5006	19	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	5	1015	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	89.3891651124798	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACATGCAACATACCCC	4918	False	NA	NA	False	AATAAA	-22	NA	6339368	6357173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.58	chr11	+	4084	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	6	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	89.7712389702871	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGGCTGAGTCCTTCC	4919	False	NA	16	True	ATTAAA	-16	NA	6339369	6356070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350790_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.59	chr11	+	9515	19	NNC	ENSMUSG00000041164.16	novel	3806	19	NA	NA	13	0	intron_retention	FALSE	canonical	3	27	junction_8	89.3757672849737	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4926	False	NA	20	True	ATTAAA	-20	NA	6339376	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.6	chr11	+	4536	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	-289	-48	1	48	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCCAAGTTGGCTTCA	4624	False	NA	63	True	AGTAAA	-16	NA	6339074	6356206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.61	chr11	+	4038	21	NNC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	17	52885	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	105.971930245702	2027	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGATTTCATTTTCAGA	4930	False	NA	NA	False	NA	NA	NA	6339380	6409043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989_6356069_6408995
ES.4254.64	chr11	+	3878	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	111.552851963378	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGAGTCCTTCCTT	4935	False	NA	18	True	ATTAAA	-18	NA	6339385	6356072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348653_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351212_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.67	chr11	+	3619	19	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	31	-249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	89.697726274223	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTGTAGAAATGCCA	4944	False	NA	NA	False	AATAAA	-12	NA	6339394	6355681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352807_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.70	chr11	+	4047	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.8773354806402	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGAGTCCTTCCTTT	5025	False	NA	19	True	ATTAAA	-19	NA	6339475	6356073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339655_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.71	chr11	+	4737	19	NIC	ENSMUSG00000041164.16	novel	4319	21	NA	NA	163	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	115.670735866089	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAAGCTCAGGATATCC	5183	False	NA	13	True	AATAAA	-16	NA	6339633	6356156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6340498_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.72	chr11	+	6827	19	ISM	ENSMUSG00000041164.16	ENSMUST00000109786.8	4319	21	2875	1	-2842	-1	3prime_fragment	FALSE	canonical	3	220	junction_3	42.3571309605582	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAGCTCAGGATATCCC	7895	False	NA	14	True	AATAAA	-17	NA	6342345	6356157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.73	chr11	+	6144	4	NIC	ENSMUSG00000041164.16	novel	3542	17	NA	NA	-2295	2414	intron_retention	FALSE	canonical	3	325	junction_3	36.2338086445365	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACCAGTTAAATACGCT	8442	False	NA	NA	False	NA	NA	NA	6342892	6350262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6346435_6346664_6347290_6347506_6348725_6349503
ES.4254.74	chr11	+	5055	17	NIC	ENSMUSG00000041164.16	novel	3806	19	NA	NA	-515	0	intron_retention	FALSE	canonical	3	245	junction_6	34.1648119415284	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	NA	False	NA	20	True	ATTAAA	-20	NA	6344672	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6345679_6345757_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.75	chr11	+	3659	19	FSM	ENSMUSG00000041164.16	ENSMUST00000102914.10	3806	19	-245	392	-245	-248	multi-exon	FALSE	canonical	3	118	junction_3	59.8521068247228	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGTGTAGAAATGCCAA	NA	False	NA	NA	False	AATAAA	-13	NA	6344942	6355682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.76	chr11	+	5433	15	NIC	ENSMUSG00000041164.16	novel	3806	19	NA	NA	195	1006	intron_retention	FALSE	canonical	3	118	junction_1	63.2012093012694	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACATACAGAATACATGCA	NA	False	NA	NA	False	AATAAA	-13	NA	6345799	6357164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.77	chr11	+	3111	4	NIC	ENSMUSG00000041164.16	novel	3542	17	NA	NA	5106	-1	intron_retention	FALSE	canonical	3	316	junction_1	12.675435561221	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAGCTCAGGATATCCC	5289	False	NA	14	True	AATAAA	-17	NA	6351834	6356157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.78	chr11	+	1135	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	36	-1	36	1	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTTTGTATTGGAGT	NA	False	NA	3	True	AATAAA	-20	NA	6365478	6369818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ES.4254.80	chr11	+	3034	3	ISM	ENSMUSG00000071866.13	ENSMUST00000155824.2	2853	4	-8	19	0	-11	intron_retention	FALSE	canonical	3	37102	junction_1	408	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365867	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6368132_6368225_6368315_6369112
ES.4254.82	chr11	+	2961	3	NIC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	0	1	intron_retention	FALSE	canonical	3	36680	junction_2	619	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTTTGTATTGGAGT	NA	False	NA	3	True	AATAAA	-20	NA	6365867	6369818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6368315_6369112_6369286_6369477
ES.4254.84	chr11	+	710	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16128.6470914333	1452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365867	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365969_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ES.4254.88	chr11	+	745	5	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16349.7512519304	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365867	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365980_6368100_6368132_6368201_6368315_6369112_6369286_6369477
ES.4254.9	chr11	+	3893	20	NNC	ENSMUSG00000041164.16	novel	4116	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	107.244226416731	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4627	False	NA	20	True	ATTAAA	-20	NA	6339077	6356074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349542_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ES.4254.91	chr11	+	2866	4	FSM	ENSMUSG00000071866.13	ENSMUST00000155824.2	2853	4	-8	-5	0	0	multi-exon	FALSE	canonical	3	36680	junction_3	513.872444181325	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6368132_6368225_6368315_6369112_6369286_6369477
ES.4254.92	chr11	+	3753	2	NIC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	36680	junction_1	0	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTTGTTTGTAT	NA	False	NA	-3	True	AATAAA	-14	NA	6365867	6369812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6369286_6369477
ES.4254.94	chr11	+	843	4	NIC	ENSMUSG00000071866.13	novel	746	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	147	junction_1	17520.9118674419	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365868	6369817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6365985_6368100_6368315_6369112_6369286_6369477
ES.4254.95	chr11	+	3127	2	NIC	ENSMUSG00000071866.13	novel	2853	4	NA	NA	1	-11	intron_retention	FALSE	canonical	3	37918	junction_1	0	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365868	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6368315_6369112
ES.4254.99	chr11	+	732	5	NNC	ENSMUSG00000071866.13	novel	746	5	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16128.6470914333	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACTAAATAAGAAC	NA	False	NA	-22	True	NA	NA	NA	6365868	6369793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6365992_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ES.4255.1	chr11	-	182	1	Intergenic	novelGene_3270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGTAAATACATAAGTAA	3127	False	NA	0	True	NA	NA	NA	6364009	6363827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6363800_6364000
ES.4256.1	chr11	-	134	1	Intergenic	novelGene_3272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6374787	6374653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6374700_6374800
ES.4257.1	chr11	-	1635	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	3	-5	3	5	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTGGTCCTGAGAATT	NA	False	NA	0	True	AATAAA	-29	NA	6394440	6377223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ES.4257.10	chr11	-	803	6	NNC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	1566.99393744839	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGTGTCTCAGTA	NA	False	NA	-7	True	GATAAA	-12	NA	6394423	6378141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6378433_6379095_6379226_6383723_6383838_6387965_6388069_6389375_6389454_6394336
ES.4257.15	chr11	-	167	1	Intergenic	novelGene_3273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTCCAATTGTTAAGG	NA	False	NA	NA	False	NA	NA	NA	6379804	6379637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6379600_6379800
ES.4257.16	chr11	-	4054	4	NNC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	-38	-1881	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	1450.7681490239	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTCTACTATAGAATAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	6394390	6380018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6383838_6387965_6388069_6389375_6389454_6394336
ES.4257.2	chr11	-	1487	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-62	-906	29	-3	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCATGTGTCCTGGTCC	NA	False	NA	-8	True	AATAAA	-21	NA	6394414	6377231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ES.4257.5	chr11	-	1698	6	NNC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	33	-5	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	1566.99393744839	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCATGTGTCCTGGT	NA	False	NA	-10	True	AATAAA	-19	NA	6394410	6377233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6378433_6379095_6379226_6383723_6383838_6387965_6388069_6389375_6389454_6394336
ES.4257.6	chr11	-	755	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	-32	910	-32	-1	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTGTCTCAGTATTT	NA	False	NA	-4	True	GATAAA	-15	NA	6394475	6378138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ES.4257.7	chr11	-	906	7	NNC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1612.54043876942	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGTGTCTCAGTA	NA	False	NA	-7	True	GATAAA	-12	NA	6394431	6378141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6378433_6379095_6379226_6383723_6383838_6386564_6386660_6387965_6388069_6389375_6389454_6394336
ES.4257.8	chr11	-	619	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-104	4	-13	-4	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGTGTCTCAGTA	NA	False	NA	-7	True	GATAAA	-12	NA	6394456	6378141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ES.4257.9	chr11	-	700	5	NNC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1591.49526782206	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGTGTCTCAGTA	NA	False	NA	-7	True	GATAAA	-12	NA	6394434	6378141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6378433_6379095_6379226_6387965_6388069_6389375_6389454_6394336
ES.4258.1	chr11	-	177	1	Intergenic	novelGene_3275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATCAATAATATCCAGC	5440	False	NA	NA	False	NA	NA	NA	6410230	6410053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6410100_6410200
ES.4259.1	chr11	-	8472	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-153	0	-153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGCCCTTGCCTCTT	NA	False	NA	-3	True	AATAAA	-23	NA	6426070	6417598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6417600_6426100
ES.4259.2	chr11	-	7495	2	Genic_Genomic	ENSMUSG00000094483.3	novel	8319	1	NA	NA	656	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACAGTCTTGTGCCCT	NA	False	NA	-11	True	AATAAA	-15	NA	6425261	6417606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_6424953_6425112
ES.4259.3	chr11	-	6488	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-151	1982	-151	-1982	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCACCATAAAGATTTATT	NA	False	NA	NA	False	AATAAA	-2	NA	6426068	6419580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6419600_6426100
ES.4259.4	chr11	-	4493	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-114	3940	-114	-3940	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGTGGTTTCTATTG	NA	False	NA	NA	False	AAGAAA	-37	NA	6426031	6421538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6421500_6426000
ES.4259.5	chr11	-	4022	1	FSM	ENSMUSG00000092885.4	ENSMUST00000175144.4	53	1	-3776	-193	-3776	193	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTGGTGGGTTTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	6426053	6422031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6422000_6426100
ES.4259.6	chr11	-	3489	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-137	4967	-137	-4967	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGCTGTAACGTTTTC	NA	False	NA	NA	False	AATGAA	-22	NA	6426054	6422565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6422600_6426100
ES.4259.7	chr11	-	3126	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-148	5341	-148	-5341	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGGTGCCCTTACAG	NA	False	NA	NA	False	NA	NA	NA	6426065	6422939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6422900_6426100
ES.4259.8	chr11	-	2659	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-140	5800	-140	-5800	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGATTTTCAGTATAAA	NA	False	NA	16	True	AATAAA	-37	NA	6426057	6423398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6423400_6426100
ES.4259.9	chr11	-	1285	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-159	7193	-159	-7193	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAACAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	6426076	6424791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6424800_6426100
ES.426.1	chr1	+	178	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAAGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	49146172	49146350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_49146200_49146400
ES.4260.1	chr11	-	172	1	Intergenic	novelGene_3276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTTAAAAAAAAGAAAAA	5551	False	NA	NA	False	NA	NA	NA	6438860	6438688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6438700_6438900
ES.4261.1	chr11	+	181	1	Intergenic	novelGene_3277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATATGATTGAA	NA	False	NA	NA	False	NA	NA	NA	6441397	6441578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6441400_6441600
ES.4262.1	chr11	-	3313	22	NIC	ENSMUSG00000020437.13	novel	3307	22	NA	NA	-28	-1	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.07539527408542	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTGCCACTGCTTT	6515	False	NA	-1	True	AATAAA	-19	NA	6469532	6456548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6456833_6456906_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6460372_6460867_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6466865_6467086_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978_6469188_6469308
ES.4262.3	chr11	-	3771	18	NIC	ENSMUSG00000020437.13	novel	3307	22	NA	NA	425	-3	intron_retention	FALSE	canonical	1	1	junction_13	5.29019462492167	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTGGCTGCCACTGCT	6968	False	NA	-3	True	AATAAA	-17	NA	6469079	6456550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6457062_6457868_6457983_6458189_6458295_6459324_6459470_6460147_6461076_6461482_6461650_6462160_6462294_6462462_6462538_6464466_6464538_6464751_6464923_6465093_6465209_6465848_6465995_6466078_6466304_6466747_6467198_6467569_6467624_6467851_6468018_6468733_6468828_6468978
ES.4263.1	chr11	-	1740	3	NNC	ENSMUSG00000085156.9	novel	1540	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6478808	6475591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6475665_6476968_6478375_6478547
ES.4263.3	chr11	-	3185	1	FSM	ENSMUSG00000064513.3	ENSMUST00000082579.3	133	1	-611	-2441	-611	2441	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6478776	6475591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6475600_6478800
ES.4263.4	chr11	-	600	5	NNC	ENSMUSG00000085156.9	novel	611	4	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	190.724113577702	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6478851	6475591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547_6478665_6478746
ES.4263.6	chr11	-	478	3	NNC	ENSMUSG00000085156.9	novel	771	3	NA	NA	-406	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	221.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6478165	6475591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6475818_6476354_6476438_6477996
ES.4263.8	chr11	-	2443	3	NIC	ENSMUSG00000085156.9	novel	611	4	NA	NA	1	-21	intron_retention	FALSE	canonical	3	436	junction_2	5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAGAAATGAGACTC	NA	False	NA	-23	True	NA	NA	NA	6478765	6475612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6475818_6476354_6478375_6478547
ES.4263.9	chr11	-	2937	2	FSM	ENSMUSG00000085156.9	ENSMUST00000134527.3	1540	2	36	-1433	36	-26	multi-exon	FALSE	canonical	3	436	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAATAAATAGAAATGA	NA	False	NA	-28	True	NA	NA	NA	6478727	6475617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6478375_6478547
ES.4264.1	chr11	+	1784	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-64	1	combination_of_known_junctions	TRUE	canonical	2	2	junction_4	144.667506717991	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAGTTGTCAAGCATT	NA	False	NA	14	True	AAAACA	-26	NA	6496822	6546743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.11	chr11	+	3089	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	38	-1269	15	1269	multi-exon	FALSE	canonical	3	315	junction_9	41.5204843093617	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACAATATCACTGTGGT	NA	False	NA	NA	False	AAAAAG	-28	NA	6496924	6548013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.12	chr11	+	3078	9	ISM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	21702	12	7359	-2	3prime_fragment	FALSE	canonical	3	315	junction_8	41.8238493565573	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATTTAATCTCCAGT	NA	False	NA	3	True	AAAACA	-15	NA	6518588	6546732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.13	chr11	+	2434	2	Intergenic	novelGene_3279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATACATTCATAGTCTC	6419	False	NA	NA	False	AATAAA	-20	NA	6535327	6537942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6536543_6536723
ES.4264.2	chr11	+	1699	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-16	1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	133.856266196245	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCAGTTGTCAAGCATT	NA	False	NA	14	True	AAAACA	-26	NA	6496870	6546743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.3	chr11	+	1934	11	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.211750475694	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTGTCAAGCATTTTTT	NA	False	NA	18	True	AAAACA	-30	NA	6496870	6546747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6497030_6519441_6519499_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.4	chr11	+	1883	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	-13	-12	-13	12	multi-exon	FALSE	canonical	3	315	junction_9	41.5204843093617	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTTTTTTTCCTATTC	NA	False	NA	27	True	AAAACA	-39	NA	6496873	6546756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.5	chr11	+	1593	8	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	149.940804646231	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGTTGTCAAGCAT	NA	False	NA	13	True	AAAACA	-25	NA	6496881	6546742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_6497030_6519963_6520138_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.6	chr11	+	2042	11	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	168.095092135374	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGTTGTCAAGCAT	NA	False	NA	13	True	AAAACA	-25	NA	6496884	6546742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6497030_6519963_6520138_6526461_6526646_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.7	chr11	+	3695	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	13	-1850	-10	1850	multi-exon	FALSE	canonical	3	315	junction_9	41.5204843093617	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGATCCTGGTGACTCCT	NA	False	NA	NA	False	NA	NA	NA	6496899	6548594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.8	chr11	+	5877	10	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	-8	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	175.378180435422	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTCAAGCATTTTTTTT	NA	False	NA	20	True	AAAACA	-32	NA	6496901	6546749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6497026_6519963_6520138_6534519_6534604_6535033_6536543_6536723_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4264.9	chr11	+	1999	11	NNC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	167.894639580899	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGTTGTCAAGCAT	NA	False	NA	13	True	AAAACA	-25	NA	6496910	6546742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6497030_6519963_6520138_6526478_6526646_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ES.4265.1	chr11	-	3392	1	Intergenic	novelGene_3278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTACTTGATTGGCTGAA	NA	False	NA	NA	False	NA	NA	NA	6507145	6503753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6503800_6507100
ES.4265.2	chr11	-	1430	3	Antisense	novelGene_ENSMUSG00000000378.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6507146	6503780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_6504043_6504079_6504119_6506017
ES.4266.1	chr11	-	152	1	Intergenic	novelGene_3280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAATCAAAA	2660	False	NA	NA	False	NA	NA	NA	6558351	6558199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6558200_6558400
ES.4267.1	chr11	+	175	1	Intergenic	novelGene_3281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6559582	6559757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6559600_6559800
ES.4268.1	chr11	+	2137	11	Antisense	novelGene_ENSMUSG00000065686.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCACTGGCAAACTAC	2994	False	NA	NA	False	NA	NA	NA	6567348	6575640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6567422_6567516_6567636_6567966_6568213_6568463_6568603_6568994_6569111_6569555_6569713_6569970_6570146_6570743_6571066_6573815_6574283_6575147_6575213_6575382
ES.4269.1	chr11	-	3140	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	-23	-827	1	2	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCACTGGCTTTTCTTT	NA	False	NA	-3	True	AATAAA	-21	NA	6576066	6565595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.10	chr11	-	3184	13	NNC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	6	junction_11	200.854563193261	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGGCCACTGGCTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	6576043	6565599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.11	chr11	-	2357	1	NIC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	74	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGGCCACTGGCTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	6567956	6565599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565600_6568000
ES.4269.12	chr11	-	3131	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	9	-1	intron_retention	FALSE	canonical	0	0	junction_8	223.08520793634	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGGCCACTGGCTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	6576034	6565599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570236_6570741_6571066_6573815_6574284_6575964
ES.4269.13	chr11	-	3392	13	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_9	197.8776803707	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGGGCCACTGGCTTT	NA	False	NA	-8	True	AATAAA	-16	NA	6576065	6565600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573203_6573462_6573815_6574284_6575148_6575214_6575964
ES.4269.14	chr11	-	2748	13	NIC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	210	-3	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	214.120098698526	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	6575812	6565601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575383
ES.4269.15	chr11	-	3054	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	24	junction_11	154.867151813236	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	6576044	6565601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
ES.4269.16	chr11	-	2665	13	NIC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	215	-3	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	179.453723530299	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	6575807	6565601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575383
ES.4269.17	chr11	-	3400	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	210	-3	intron_retention	FALSE	canonical	3	13	junction_11	157.931567982115	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	6575812	6565601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575444
ES.4269.18	chr11	-	7292	9	ISM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	-8	4	-8	-3	intron_retention	FALSE	canonical	3	74	junction_1	160.775464546056	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	False	NA	-9	True	AATAAA	-15	NA	6576051	6565601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971
ES.4269.19	chr11	-	2502	14	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	239.250951411858	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACATGGGCCACTGGCT	NA	False	NA	-10	True	AATAAA	-14	NA	6576077	6565602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.2	chr11	-	2726	12	NIC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	46	junction_8	190.157046883198	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576035	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.20	chr11	-	3245	9	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	1494	-5	intron_retention	FALSE	canonical	3	527	junction_2	20.2326314403243	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGGCCACTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	6573965	6565603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6571066_6573815
ES.4269.21	chr11	-	3851	11	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	12	junction_7	231.599848877325	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGGCCACTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	6576050	6565603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6569714_6569971_6571066_6573370_6573462_6573815_6574284_6575148_6575214_6575964
ES.4269.22	chr11	-	2658	12	NIC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	74	junction_1	138.99604608206	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGGCCACTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	6576050	6565603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.23	chr11	-	2385	14	NNC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	217.516536812681	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGGCCACTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	6576039	6565603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.24	chr11	-	2327	13	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	221.677255386193	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCACATGGGCCACTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	6576044	6565603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569644_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.25	chr11	-	2417	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-2	23	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTATCTCCTCTCTCTCG	NA	False	NA	-4	True	AATAAA	-42	NA	6576069	6566399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.26	chr11	-	2343	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	-30	-23	-6	23	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTATCTCCTCTCTCTCG	NA	False	NA	-4	True	AATAAA	-42	NA	6576073	6566399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.27	chr11	-	2275	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-4	15	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	154.867151813236	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGTATCTATCTCCT	NA	False	NA	-12	True	AATAAA	-34	NA	6576071	6566407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
ES.4269.28	chr11	-	3693	9	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	7	15	intron_retention	FALSE	canonical	3	438	junction_5	40.165089007744	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGTATCTATCTCCT	NA	False	NA	-12	True	AATAAA	-34	NA	6576060	6566407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6567423_6567517_6568209_6568459_6568605_6568996_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.3	chr11	-	3391	11	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	168.309268906974	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576041	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568605_6568996_6569111_6569555_6569742_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.30	chr11	-	2589	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	210	10	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	157.931567982115	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGGCTCTGTATCTAT	NA	False	NA	-17	True	AATAAA	-29	NA	6575812	6566412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575444
ES.4269.31	chr11	-	5045	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	5	10	intron_retention	FALSE	canonical	3	438	junction_8	42.2369506475077	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGGCTCTGTATCTAT	NA	False	NA	-17	True	AATAAA	-29	NA	6576038	6566412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6574284_6575148_6575214_6575964
ES.4269.32	chr11	-	5150	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-2	6	intron_retention	FALSE	canonical	3	46	junction_8	153.861106196465	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCCCAGGCTCTGTAT	NA	False	NA	-21	True	AATAAA	-25	NA	6576069	6566416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6574284_6575148_6575214_6575964
ES.4269.33	chr11	-	3473	9	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	3	4	intron_retention	FALSE	canonical	3	504	junction_8	25.4705712539001	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATCTTCCCAGGCTCTGT	NA	False	NA	-23	True	AATAAA	-23	NA	6576040	6566418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6568605_6568996_6569111_6569555_6569714_6569971_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.35	chr11	-	4847	8	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-7	3	intron_retention	FALSE	canonical	3	527	junction_2	19.695643359559	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576050	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6571066_6573815
ES.4269.36	chr11	-	4086	9	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	1	3	intron_retention	FALSE	canonical	3	527	junction_2	17.3259198889987	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576042	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569714_6569971_6571066_6573815_6574284_6575148
ES.4269.37	chr11	-	2478	11	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	231	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	210.491353741668	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6575791	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569742_6570741_6571066_6573815_6574284_6575148_6575214_6575383
ES.4269.38	chr11	-	3334	10	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	2	3	intron_retention	FALSE	canonical	3	504	junction_9	22.6115888565418	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576041	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569714_6569971_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.4	chr11	-	2411	13	NIC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	184.937433113652	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576053	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.40	chr11	-	2854	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	3	3	intron_retention	FALSE	canonical	3	24	junction_10	161.19122184536	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576064	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6571066_6573815_6574284_6575148_6575214_6576022
ES.4269.41	chr11	-	2326	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	204.479423685475	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6576062	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6568026_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.42	chr11	-	2644	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	209	3	combination_of_known_junctions	FALSE	canonical	3	75	junction_11	140.71599672936	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTTCCCAGGCTCTG	NA	False	NA	-24	True	AATAAA	-22	NA	6575813	6566419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575383
ES.4269.43	chr11	-	5297	7	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	2217	-2	1633	2	intron_retention	FALSE	canonical	3	527	junction_2	21.7236430339542	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTATCTTCCCAGGCTCT	NA	False	NA	-25	True	AATAAA	-21	NA	6573826	6566420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555
ES.4269.44	chr11	-	2124	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	211.278516584739	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTATCTTCCCAGGCTC	NA	False	NA	-26	True	AATAAA	-20	NA	6576058	6566421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570032_6570753_6571066_6573815_6574284_6575148_6575214_6576022
ES.4269.45	chr11	-	6007	10	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_8	160.286394915669	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6576067	6566422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6575214_6575964
ES.4269.46	chr11	-	3215	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	233	0	intron_retention	FALSE	canonical	3	75	junction_10	146.005616330332	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6575789	6566422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6571066_6573815_6574284_6575148_6575214_6575383
ES.4269.47	chr11	-	5927	4	NIC	ENSMUSG00000000384.16	novel	2241	12	NA	NA	233	0	intron_retention	FALSE	canonical	3	527	junction_2	13.8884444373331	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6575789	6566424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6571066_6573815
ES.4269.48	chr11	-	2374	13	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	200.854563193261	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6576058	6566424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.5	chr11	-	2332	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	-9	1	-9	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576052	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.50	chr11	-	2384	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	438	junction_7	42.1074815205089	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6576044	6566424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.51	chr11	-	2476	13	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_9	226.081275331584	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	False	NA	-29	True	AATAAA	-17	NA	6576062	6566424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573370_6573462_6573815_6574284_6575148_6575214_6575964
ES.4269.53	chr11	-	3425	8	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	3826	3	-966	-1	intron_retention	FALSE	canonical	3	527	junction_2	21.5983748443805	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGCTATCTTCCCAG	NA	False	NA	-30	True	AATAAA	-16	NA	6572217	6566425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971
ES.4269.54	chr11	-	5211	12	NNC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	6	junction_10	236.454527978749	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCCAGCTATCTTCCCA	NA	False	NA	-31	True	AATAAA	-15	NA	6576069	6566426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.55	chr11	-	3769	7	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-1039	-2	intron_retention	FALSE	canonical	0	0	junction_6	203.721828318257	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCCAGCTATCTTCCCA	NA	False	NA	-31	True	AATAAA	-15	NA	6572290	6566426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6568209_6568459_6568605_6568996_6569714_6569971_6570236_6570741
ES.4269.56	chr11	-	3232	11	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	-11	-10	intron_retention	FALSE	canonical	3	46	junction_8	153.095427756677	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGTGGAAGCCAGCTA	NA	False	NA	-39	True	AATAAA	-7	NA	6576054	6566434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6575214_6575964
ES.4269.57	chr11	-	1866	4	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	3	193	intron_retention	FALSE	canonical	3	504	junction_3	28.6472802664872	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGATGTGACGTC	NA	False	NA	NA	False	GATAAA	-17	NA	6576040	6569808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.58	chr11	-	1107	5	ISM	ENSMUSG00000000384.16	ENSMUST00000150697.8	2241	12	2	3546	2	31	5prime_fragment	FALSE	canonical	3	438	junction_1	51.7946667138616	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGAGAGAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	6576041	6569970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.59	chr11	-	1425	4	FSM	ENSMUSG00000000384.16	ENSMUST00000131815.8	853	4	-32	-540	-11	540	multi-exon	FALSE	canonical	3	41	junction_1	235.927013195936	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGTTGTTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-32	NA	6576054	6572659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_6573462_6573815_6574284_6575148_6575214_6575964
ES.4269.6	chr11	-	3282	13	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	11	0	intron_retention	FALSE	canonical	1	12	junction_9	245.65133093246	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576056	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569097_6569555_6569714_6569971_6570222_6570741_6571066_6573370_6573462_6573815_6574284_6575148_6575214_6575964
ES.4269.60	chr11	-	954	5	NNC	ENSMUSG00000000384.16	novel	853	4	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	209.986904353581	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTATTTGTGTGATTC	NA	False	NA	-3	True	AATAAA	-15	NA	6576043	6573190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6573462_6573815_6574284_6574473_6574545_6575148_6575214_6575964
ES.4269.61	chr11	-	1233	3	ISM	ENSMUSG00000000384.16	ENSMUST00000150697.8	2241	12	4	6766	4	9	5prime_fragment	FALSE	canonical	3	504	junction_2	34	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTATTTGTGTGATTC	NA	False	NA	-3	True	AATAAA	-15	NA	6576039	6573190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_6574284_6575148_6575214_6575964
ES.4269.62	chr11	-	852	4	NIC	ENSMUSG00000000384.16	novel	853	4	NA	NA	-8	4	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	254.417417293357	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAAGGCCTATTTGTGT	NA	False	NA	-8	True	AATAAA	-10	NA	6576075	6573195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6573462_6573815_6574284_6575148_6575214_6576022
ES.4269.7	chr11	-	2595	13	NNC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	191.179671164762	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6575795	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575444
ES.4269.8	chr11	-	3207	12	NIC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	46	junction_8	147.44311131545	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576058	6565598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.4269.9	chr11	-	2341	13	NNC	ENSMUSG00000000384.16	novel	2324	13	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	192.873375272195	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGGCCACTGGCTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	6576034	6565599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569742_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ES.427.1	chr1	-	208	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTAGGTCTGGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	49955105	49954897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_49954900_49955100
ES.4270.1	chr11	-	197	1	Intergenic	novelGene_3282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACGTTGGTCAATACA	NA	False	NA	NA	False	NA	NA	NA	6579324	6579127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6579100_6579300
ES.4271.1	chr11	-	801	1	NIC	ENSMUSG00000000381.11	novel	905	2	NA	NA	1172	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTGTCTGTCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	6586283	6585482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_6585500_6586300
ES.4271.2	chr11	-	157	1	Intergenic	novelGene_3283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAATCGCCGGGCAG	NA	False	NA	NA	False	NA	NA	NA	6586284	6586127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6586100_6586300
ES.4272.1	chr11	+	1231	3	FSM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	-1	3	-1	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGGTATTTCTCATTT	NA	False	NA	11	True	ATTAAA	-11	NA	6608519	6627472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_6608628_6624762_6624896_6626482
ES.4272.2	chr11	+	1205	5	NNC	ENSMUSG00000041046.8	novel	1333	4	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.19615242270663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGTATTTCTCATTTTA	NA	False	NA	13	True	ATTAAA	-13	NA	6608524	6627474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_6608628_6614200_6614348_6624762_6624896_6626482_6627106_6627275
ES.4273.1	chr11	+	158	1	Intergenic	novelGene_3284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	6647415	6647573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6647400_6647600
ES.4274.1	chr11	+	2741	2	Antisense	novelGene_ENSMUSG00000082579.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	6727738	6741438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6727932_6738890
ES.4274.2	chr11	+	262	2	Antisense	novelGene_ENSMUSG00000082579.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAAGAAGA	NA	False	NA	NA	False	AGTAAA	-45	NA	6727777	6738998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_6727932_6738890
ES.4275.1	chr11	+	2402	1	Intergenic	novelGene_3285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAACCCAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	6835470	6837872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_6835500_6837900
ES.4276.1	chr11	-	4977	1	Intergenic	novelGene_3286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGCTCACATCTTCA	NA	False	NA	NA	False	NA	NA	NA	6843322	6838345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_6838300_6843300
ES.4277.1	chr11	+	8145	20	NNC	ENSMUSG00000020431.6	novel	12259	20	NA	NA	-84	1427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.02027967066476	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGTCTTTGAAGCAT	NA	False	NA	NA	False	AATAAA	-25	NA	7013404	7124306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_7014236_7028887_7029038_7050567_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.10	chr11	+	159	1	Intergenic	novelGene_3287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	7024642	7024801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_7024600_7024800
ES.4277.2	chr11	+	7445	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-84	4898	-84	729	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTGAATCGTGATGTT	NA	False	NA	NA	False	AATAAA	-36	NA	7013404	7123608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.3	chr11	+	6734	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-83	5608	-83	19	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAATCTTGTACAAT	NA	False	NA	28	True	GATAAA	-22	NA	7013405	7122898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.5	chr11	+	12308	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-49	0	-49	0	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGCCATTTTCATTGAA	NA	False	NA	NA	False	AATAAA	-23	NA	7013439	7128506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.6	chr11	+	6732	21	NIC	ENSMUSG00000020431.6	novel	12259	20	NA	NA	-36	14	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	7.21439533155759	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTTAATCTTGT	NA	False	NA	23	True	GATAAA	-42	NA	7013452	7122893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7116239_7116290_7117063_7117189_7119412
ES.4277.7	chr11	+	4427	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-24	7856	-24	-2229	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATACCCACGAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	7013464	7120650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.8	chr11	+	6707	21	NNC	ENSMUSG00000020431.6	novel	12259	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.24637840579693	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATATTGCCTTATTT	NA	False	NA	9	True	GATAAA	-28	NA	7013478	7122879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094119_7094185_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ES.4277.9	chr11	+	3995	16	ISM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	65	15847	65	-10220	intron_retention	FALSE	canonical	3	12	junction_6	3.69624434016776	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACTTCTAAGTTGACAA	NA	False	NA	NA	False	NA	NA	NA	7013553	7112659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278
ES.4278.1	chr11	-	1186	1	Intergenic	novelGene_3288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTCAAGTCATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	7070896	7069710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_7069700_7070900
ES.4279.1	chr11	-	2729	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	-308	0	-282	0	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTTGTCTGTTTCTGG	NA	False	NA	NA	False	AATAAA	-23	NA	7164205	7156085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
ES.4279.3	chr11	-	2202	6	NNC	ENSMUSG00000020427.12	novel	2421	5	NA	NA	2	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	76.8203098145276	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGCCCTTTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	7163921	7156094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384_7163621_7163854
ES.4279.4	chr11	-	2206	6	NNC	ENSMUSG00000020427.12	novel	2421	5	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.8203098145276	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAAGCCCTTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	7163921	7156095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384_7163618_7163846
ES.428.1	chr1	+	112	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATTTGTCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	50421520	50421632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_50421500_50421600
ES.4280.1	chr11	-	181	1	Intergenic	novelGene_3289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAACATAAC	NA	False	NA	NA	False	NA	NA	NA	7282039	7281858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_7281900_7282000
ES.4281.1	chr11	+	2879	3	Intergenic	novelGene_3290	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGGCCATACACAGGA	NA	False	NA	NA	False	NA	NA	NA	7373823	7381498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_7374215_7378855_7379062_7379216
ES.4281.2	chr11	+	2004	3	Intergenic	novelGene_3291	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7373917	7433533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_7374215_7378855_7379062_7432032
ES.4282.1	chr11	-	128	1	Intergenic	novelGene_3292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCTGTGTCATAGCTA	NA	False	NA	NA	False	NA	NA	NA	7374079	7373951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_7374000_7374100
ES.4283.1	chr11	+	208	1	Intergenic	novelGene_3293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGTACCCTCATGAAT	NA	False	NA	NA	False	NA	NA	NA	7935277	7935485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_7935300_7935500
ES.4284.1	chr11	+	4345	2	Antisense	novelGene_ENSMUSG00000020422.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAAAAGAAGATAGCTT	NA	False	NA	NA	False	NA	NA	NA	8382404	8386794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_8382708_8382752
ES.4285.1	chr11	+	157	1	Intergenic	novelGene_3295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	8493039	8493196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_8493000_8493200
ES.4286.1	chr11	+	184	1	Intergenic	novelGene_3296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATCTGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	8540203	8540387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_8540200_8540400
ES.4287.1	chr11	+	3877	2	Antisense	novelGene_ENSMUSG00000020422.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	8565091	8569004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_8566598_8566633
ES.4288.1	chr11	+	174	1	Intergenic	novelGene_3298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	8583687	8583861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_8583700_8583900
ES.4289.1	chr11	+	208	1	Intergenic	novelGene_3299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8585416	8585624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_8585400_8585600
ES.429.1	chr1	+	159	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGCATCCCTCAT	NA	False	NA	NA	False	NA	NA	NA	51181553	51181712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_51181600_51181700
ES.4290.1	chr11	+	509	1	Intergenic	novelGene_3300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8586142	8586651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_8586100_8586700
ES.4291.1	chr11	-	5665	33	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-52	4777	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.8580067924205	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAAGGAGCCATGGGGG	9609	False	NA	NA	False	AATAAA	-34	NA	8614587	8376874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8377278_8384033_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8596351_8596461_8614478
ES.4291.10	chr11	-	7506	30	NIC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	15.2633637670059	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCATTTTTTTAAGT	9966	False	NA	NA	False	AATAAA	-22	NA	8614672	8381653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8614478
ES.4291.11	chr11	-	7360	31	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	17.4701332437837	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCATTTTTTTAAGT	9625	False	NA	NA	False	AATAAA	-22	NA	8614571	8381653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8614478
ES.4291.12	chr11	-	7584	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19510	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_29	13.2277228427735	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCATTTTTTTAAGT	3602	False	NA	NA	False	AATAAA	-22	NA	8555377	8381653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
ES.4291.13	chr11	-	7854	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	40	3	40	-3	multi-exon	FALSE	canonical	3	18	junction_30	12.8998277335612	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	5115	False	NA	NA	False	AATAAA	-21	NA	8574847	8381654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.15	chr11	-	7601	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	10643	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	15.3442352548296	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	8340	False	NA	NA	False	AATAAA	-21	NA	8603892	8381654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8603714
ES.4291.16	chr11	-	7737	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	108	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.5729121208084	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	5183	False	NA	NA	False	AATAAA	-21	NA	8574779	8381654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385822_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.17	chr11	-	7552	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19526	-3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_30	16.7421291623523	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	3618	False	NA	NA	False	AATAAA	-21	NA	8555361	8381654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555075
ES.4291.18	chr11	-	7512	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	432	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_30	15.3442352548296	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCATTTTTTTAAG	9728	False	NA	NA	False	AATAAA	-21	NA	8614103	8381654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614014
ES.4291.2	chr11	-	5478	1	Genic_Genomic	ENSMUSG00000020422.15	novel	NA	NA	NA	NA	36314	4768	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAACCTACAAGGAG	NA	False	NA	NA	False	AATAAA	-25	NA	8382361	8376883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_8376900_8382400
ES.4291.20	chr11	-	7519	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19524	-8	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_30	15.8334736835885	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	3616	False	NA	NA	False	AATAAA	-16	NA	8555363	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
ES.4291.21	chr11	-	7389	28	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	3487	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	15.1388634046676	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	6116	False	NA	NA	False	AATAAA	-16	NA	8525634	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8525474
ES.4291.22	chr11	-	8757	30	NIC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	209	-8	intron_retention	FALSE	canonical	3	18	junction_29	13.1203158223059	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	5284	False	NA	NA	False	AATAAA	-16	NA	8574678	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.23	chr11	-	4959	12	NIC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	-182	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	20.101806999076	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	8418857	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8418426
ES.4291.25	chr11	-	6205	29	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19638	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	17.9690777476764	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	3730	False	NA	NA	False	AATAAA	-16	NA	8555249	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
ES.4291.26	chr11	-	7624	29	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19460	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.3701663085581	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	3552	False	NA	NA	False	AATAAA	-16	NA	8555427	8381659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385822_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
ES.4291.27	chr11	-	5712	13	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	-24647	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	22.8890742980624	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTAATGAAGCATTTT	2966	False	NA	NA	False	AATAAA	-15	NA	8443322	8381660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8442092
ES.4291.29	chr11	-	4906	13	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	-175	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	22.488731746267	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTAATGAAGCATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	8418850	8381660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8418426
ES.4291.3	chr11	-	6267	14	ISM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	145315	-1464	-10897	1464	3prime_fragment	FALSE	canonical	3	46	junction_5	8.80424857096892	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAACTAATATCTGA	NA	False	NA	NA	False	NA	NA	NA	8429572	8380187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504
ES.4291.30	chr11	-	6320	14	NIC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	-23857	-10	intron_retention	FALSE	canonical	3	46	junction_5	8.80424857096892	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTAATGAAGCATTT	3756	False	NA	NA	False	AATAAA	-14	NA	8442532	8381661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8429666_8442092
ES.4291.33	chr11	-	7121	29	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-55	-12	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.1091671738965	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAGTCTAATGAAGCAT	9606	False	NA	NA	False	AATAAA	-12	NA	8614590	8381663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382700_8382744_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.35	chr11	-	7749	33	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	192	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	21.4373861148578	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAGTCTAATGAAGCAT	5267	False	NA	NA	False	AATAAA	-12	NA	8574695	8381663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8515118_8515220_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.36	chr11	-	7489	32	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-63	-12	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	14.7032385454799	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAGTCTAATGAAGCAT	9598	False	NA	NA	False	AATAAA	-12	NA	8614598	8381663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.38	chr11	-	6237	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	-448	2108	-448	-2108	multi-exon	FALSE	canonical	3	18	junction_30	12.8998277335612	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCGCTTGCCATTGCCA	4	True	NA	NA	False	AATATA	-25	NA	8575335	8383759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.39	chr11	-	5465	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239111.2	7629	31	50	2114	50	-2114	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATAACCGCTTGCCA	10007	False	NA	NA	False	AATATA	-19	NA	8614631	8383765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.4	chr11	-	7603	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	10641	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.7360706610192	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTTTTTAAGTCTTT	8338	False	NA	NA	False	AATAAA	-26	NA	8603894	8381649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385823_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8603714
ES.4291.40	chr11	-	5698	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	104	-2114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.4176519372815	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATAACCGCTTGCCA	5179	False	NA	NA	False	AATATA	-19	NA	8574783	8383765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385822_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469212_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.41	chr11	-	5486	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	-5344	-2114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	15.3442352548296	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATAACCGCTTGCCA	9208	False	NA	NA	False	AATATA	-19	NA	8580231	8383765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8580057
ES.4291.42	chr11	-	5344	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19668	-2114	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_29	14.3706663839457	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATAACCGCTTGCCA	3760	False	NA	NA	False	AATATA	-19	NA	8555219	8383765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555075
ES.4291.43	chr11	-	5653	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	126	-2114	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.9147140581693	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATAACCGCTTGCCA	5201	False	NA	NA	False	AATATA	-19	NA	8574761	8383765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385822_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.44	chr11	-	4686	22	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	159	-2117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	16.6489701968855	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTATAACCGCTTG	5234	False	NA	NA	False	AATATA	-16	NA	8574728	8383768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482500_8574607
ES.4291.45	chr11	-	5416	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19561	-2119	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_29	13.2277228427735	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTATTTATAACCGCT	3653	False	NA	NA	False	AATATA	-14	NA	8555326	8383770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
ES.4291.46	chr11	-	3453	1	NIC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	23989	-9582	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	8394686	8391233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8391200_8394700
ES.4291.47	chr11	-	761	1	Intergenic	novelGene_3294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATAAAGACCCA	NA	False	NA	NA	False	NA	NA	NA	8416037	8415276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_8415300_8416000
ES.4291.48	chr11	-	5707	16	ISM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	-47	82229	-47	23658	5prime_fragment	FALSE	canonical	3	26	junction_15	13.9210472147592	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTGAAATATTGACTTA	9614	False	NA	NA	False	NA	NA	NA	8614582	8463880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.49	chr11	-	1059	9	ISM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	-31	109194	-31	-3307	5prime_fragment	FALSE	canonical	3	26	junction_8	18.4928195524641	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTCTGAAAGTCCAC	9630	False	NA	NA	False	AATAAA	-17	NA	8614566	8490845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.5	chr11	-	7620	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239111.2	7629	31	9	0	9	0	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	9966	False	NA	NA	False	AATAAA	-24	NA	8614672	8381651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ES.4291.50	chr11	-	4447	1	Intergenic	novelGene_3297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6131	False	NA	NA	False	NA	NA	NA	8573831	8569384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_8569400_8573800
ES.4291.51	chr11	-	4407	2	Genic_Genomic	ENSMUSG00000020422.15	novel	7897	31	NA	NA	148	-73692	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5223	False	NA	NA	False	NA	NA	NA	8574739	8569384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_8569477_8570424
ES.4291.6	chr11	-	7713	32	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	139	0	at_least_one_novel_splicesite	TRUE	canonical	1	17	junction_1	15.4454496429277	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	5214	False	NA	NA	False	AATAAA	-24	NA	8574748	8381651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4291.7	chr11	-	7560	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	1077	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	15.3442352548296	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	6152	False	NA	NA	False	AATAAA	-24	NA	8573810	8381651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8573676
ES.4291.9	chr11	-	7776	30	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	115	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.9147140581693	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCATTTTTTTAAGT	5190	False	NA	NA	False	AATAAA	-22	NA	8574772	8381653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8384639_8385822_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ES.4292.1	chr11	-	176	1	Intergenic	novelGene_3301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATCCA	2038	False	NA	NA	False	NA	NA	NA	8622871	8622695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_8622700_8622900
ES.4293.1	chr11	-	2280	3	Intergenic	novelGene_3302	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTTGTGCATTCCA	7610	False	NA	NA	False	AATAAA	-28	NA	8645576	8643051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_8644259_8644377_8644468_8644593
ES.4293.2	chr11	-	3374	2	Intergenic	novelGene_3303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGGGTTTTGAAGCTCT	6658	False	NA	NA	False	AATAAA	-15	NA	8646528	8643064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_8646258_8646347
ES.4294.1	chr11	+	2233	4	Antisense	novelGene_ENSMUSG00000081539.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAACTGTCTTGGCT	903	False	NA	NA	False	NA	NA	NA	8723558	8793239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_8723962_8783857_8783936_8786315_8787868_8793039
ES.4294.2	chr11	+	2137	3	Antisense	novelGene_ENSMUSG00000081539.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	925	False	NA	NA	False	NA	NA	NA	8723580	8793243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_8723962_8786315_8787868_8793039
ES.4295.1	chr11	-	5017	32	NNC	ENSMUSG00000046634.13	novel	676	7	NA	NA	-38552	1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.176684695969409	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCCATGGTCTATTTT	NA	False	NA	NA	False	AATAAA	-33	NA	8852436	8775677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8776396_8783773_8783945_8784773_8784933_8786202_8786434_8794540_8794667_8798917_8799059_8799654_8799760_8804342_8804578_8805562_8805712_8806259_8806344_8807035_8807157_8811195_8811307_8813802_8813922_8815481_8815659_8816091_8816177_8816570_8816705_8817130_8817267_8818456_8818614_8819457_8819502_8820048_8820119_8820204_8820325_8821703_8821878_8824098_8824316_8825651_8825759_8829099_8829308_8831397_8831482_8836572_8836766_8839026_8839128_8840387_8840543_8840650_8840768_8851141_8851382_8852408
ES.4296.10	chr11	-	5004	6	NNC	ENSMUSG00000020413.12	novel	4172	9	NA	NA	3	-6	intron_retention	FALSE	canonical	0	0	junction_1	75.2505149484042	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTTGGAATTCATTT	NA	False	NA	86	True	AATAAA	-15	NA	8961157	8943142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8944971_8946783_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240
ES.4296.12	chr11	-	6126	6	NIC	ENSMUSG00000020413.12	novel	2114	7	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_4	73.9053448676075	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTACTTGGAATTCATT	NA	False	NA	85	True	AATAAA	-14	NA	8961157	8943143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960496_8960625_8961058
ES.4296.13	chr11	-	6772	5	NNC	ENSMUSG00000020413.12	novel	742	5	NA	NA	11	-8	intron_retention	FALSE	canonical	3	72	junction_4	52.6901319034219	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	False	NA	84	True	AATAAA	-13	NA	8961117	8943144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240
ES.4296.14	chr11	-	4562	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	11	-8	intron_retention	FALSE	canonical	0	0	junction_5	68.9217243083242	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	False	NA	84	True	AATAAA	-13	NA	8961117	8943144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960236_8960418_8960496_8960625_8961058
ES.4296.15	chr11	-	6308	7	FSM	ENSMUSG00000020413.12	ENSMUST00000139877.8	2114	7	1	-4195	1	-8	multi-exon	FALSE	canonical	3	104	junction_4	35.6436841841892	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	False	NA	84	True	AATAAA	-13	NA	8961163	8943144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ES.4296.16	chr11	-	4560	8	NNC	ENSMUSG00000020413.12	novel	4172	9	NA	NA	4	-8	intron_retention	FALSE	non_canonical	0	0	junction_1	75.0578008563251	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	False	NA	84	True	AATAAA	-13	NA	8961124	8943144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946347_8946782_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496
ES.4296.17	chr11	-	11772	4	NNC	ENSMUSG00000020413.12	novel	2114	7	NA	NA	4	-9	intron_retention	FALSE	canonical	3	12	junction_3	84.2707277502429	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTATTACTTGGAATTCA	NA	False	NA	83	True	AATAAA	-12	NA	8961124	8943145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8948757_8950076_8956064_8957493_8957602_8961058
ES.4296.19	chr11	-	4717	9	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	-304	-10	intron_retention	FALSE	canonical	0	0	junction_8	70.2948033285534	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTATTACTTGGAATTC	NA	False	NA	82	True	AATAAA	-11	NA	8961495	8943146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058_8961186_8961399
ES.4296.20	chr11	-	4475	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	7	158	7	-158	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTGGTGTCCATGGTG	NA	False	NA	-66	True	AATAAA	-29	NA	8961184	8943294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ES.4296.22	chr11	-	4119	6	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	-14	-164	intron_retention	FALSE	canonical	3	12	junction_5	75.3482581085986	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGGATGTTGGTGTCC	NA	False	NA	-72	True	AATAAA	-23	NA	8961142	8943300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8961058
ES.4296.24	chr11	-	3676	7	NNC	ENSMUSG00000020413.12	novel	4172	9	NA	NA	-13	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.351166751367	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCAGTGGGATGTTGG	NA	False	NA	-77	True	AATAAA	-18	NA	8961141	8943305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946347_8946783_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8961058
ES.4296.25	chr11	-	4002	9	FSM	ENSMUSG00000020413.12	ENSMUST00000129115.2	4172	9	0	170	0	-170	multi-exon	FALSE	canonical	0	0	junction_1	66.7859219821064	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACCAGTGGGATGTTG	NA	False	NA	-78	True	AATAAA	-17	NA	8961160	8943306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_8946347_8946783_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ES.4296.27	chr11	-	2281	1	NIC	ENSMUSG00000020413.12	novel	4172	9	NA	NA	13009	-33	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGGGATTCTTTAAT	NA	False	NA	NA	False	ATTAAA	-11	NA	8947669	8945388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8945400_8947700
ES.4296.28	chr11	-	1130	8	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	3	730	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_5	46.4880937137979	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTTGTTTTGTTTT	NA	False	NA	NA	False	AAGAAA	-19	NA	8961157	8946609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
ES.4296.3	chr11	-	4325	6	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	12	junction_5	75.3482581085986	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961184	8943136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8961058
ES.4296.5	chr11	-	4478	9	NNC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	70.2948033285534	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGAATTCATTTATTA	NA	False	NA	90	True	AATAAA	-19	NA	8961158	8943138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_8944008_8944131_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957602_8960240_8960418_8960496_8960625_8961058
ES.4296.6	chr11	-	4496	7	NIC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	10	-3	intron_retention	FALSE	canonical	0	0	junction_2	69.423018917039	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGAATTCATTTATT	NA	False	NA	89	True	AATAAA	-18	NA	8961150	8943139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_8946933_8948636_8948757_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ES.4296.7	chr11	-	5141	6	ISM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	8	4	8	-4	intron_retention	FALSE	canonical	3	104	junction_5	41.0881978188384	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTTGGAATTCATTTAT	NA	False	NA	88	True	AATAAA	-17	NA	8961183	8943140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240
ES.4297.1	chr11	+	2395	7	FSM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	3	2	3	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.25830573921179	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCAGCTGCCTCTCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	8998596	9019354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_8999201_9002693_9002880_9004209_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
ES.4298.1	chr11	+	1536	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	-380	1	-376	-1	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9067726	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.10	chr11	+	3382	7	NIC	ENSMUSG00000020407.14	novel	1157	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	2674	junction_6	138.410520634171	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068537	9086170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9069450_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.11	chr11	+	1198	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	915.937830518535	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAACACATTGTGTGAC	NA	False	NA	15	True	AATAAA	-9	NA	9068541	9086159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084732_9084932_9085163_9085311_9085960
ES.4298.13	chr11	+	2763	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	9	junction_3	1208.56371367007	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068545	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9069892_9070001_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.14	chr11	+	1386	10	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1162.68773341431	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068547	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9075089_9075268_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.15	chr11	+	1448	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	930.038767673155	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068547	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079247_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.16	chr11	+	5388	6	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	3	1	intron_retention	FALSE	canonical	3	2674	junction_5	136.868403950656	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGTGTGACTCTGCG	NA	False	NA	21	True	AATAAA	-15	NA	9068550	9086165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9069450_9075632_9075699_9079487_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.17	chr11	+	6368	7	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	2502	junction_1	152.298409563447	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068552	9086167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068661_9069373_9069450_9075632_9079606_9081629_9081789_9083233_9084932_9085163_9085311_9085960
ES.4298.18	chr11	+	2075	7	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	56	3	15	0	intron_retention	FALSE	canonical	3	2502	junction_1	149.524152638369	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068562	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721
ES.4298.19	chr11	+	2868	7	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	22	-1	intron_retention	FALSE	canonical	3	2502	junction_1	152.252440228574	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068569	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9085311_9085960
ES.4298.2	chr11	+	1393	9	FSM	ENSMUSG00000020407.14	ENSMUST00000020677.8	1277	9	-111	-5	-111	-1	multi-exon	FALSE	canonical	3	18	junction_1	932.389931506663	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9067991	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_9068285_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.20	chr11	+	2458	2	ISM	ENSMUSG00000020407.14	ENSMUST00000020677.8	1277	9	475	8946	30	-6033	internal_fragment	FALSE	canonical	3	2781	junction_1	0	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGGACTGGTTGAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	9068577	9077218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_9069450_9075632
ES.4298.21	chr11	+	2835	8	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	30	-1	intron_retention	FALSE	canonical	3	101	junction_1	961.140500251909	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068577	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.22	chr11	+	1387	9	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	905.183821110386	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068578	9086167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.23	chr11	+	941	8	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	968.667525784881	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068580	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081685_9084736_9084932_9085163_9085311_9085960
ES.4298.24	chr11	+	1288	10	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	1158.56553494631	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068580	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9069892_9070001_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.25	chr11	+	1200	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	930.268207292929	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068583	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069478_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.26	chr11	+	1270	10	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1164.37149898747	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068598	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9082283_9082397_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.27	chr11	+	1123	9	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	927.674301344497	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068626	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081783_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.29	chr11	+	1227	9	NIC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-52	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	1203.74922118355	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068734	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081783_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.3	chr11	+	2211	8	ISM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	156	1	18	-1	3prime_fragment	FALSE	canonical	3	2674	junction_7	130.54063406793	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068262	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.31	chr11	+	1296	9	NNC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	921.243512528039	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068771	9086167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068970_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.32	chr11	+	1367	10	NNC	ENSMUSG00000020407.14	novel	518	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1317.97946742095	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068773	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068868_9069373_9069450_9075089_9075268_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.33	chr11	+	1150	9	NNC	ENSMUSG00000020407.14	novel	518	6	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1185.96353232298	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068806	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085169_9085311_9085960
ES.4298.34	chr11	+	1834	8	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	101	1	intron_retention	FALSE	canonical	3	52	junction_1	981.322701713335	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACTCTGCGGTAGAG	NA	False	NA	27	True	AATAAA	-21	NA	9068887	9086171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068970_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163
ES.4298.35	chr11	+	1184	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	930.094887632439	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068962	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9069052_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.36	chr11	+	1302	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	181	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	933.373551960843	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068967	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9069170_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.37	chr11	+	2614	8	NNC	ENSMUSG00000020407.14	novel	813	4	NA	NA	194	0	intron_retention	FALSE	canonical	3	25	junction_1	987.503903376424	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068980	9086167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9069052_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.38	chr11	+	1131	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	933.045676467664	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068984	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9069021_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.39	chr11	+	3796	6	NIC	ENSMUSG00000020407.14	novel	1277	9	NA	NA	-803	0	intron_retention	FALSE	canonical	3	2674	junction_5	140.234090006674	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9074879	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9075699_9079487_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.4	chr11	+	1188	9	NNC	ENSMUSG00000020407.14	novel	1277	9	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	933.701429459653	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068262	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068351_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.40	chr11	+	5097	5	NIC	ENSMUSG00000020407.14	novel	1157	9	NA	NA	1690	-1	intron_retention	FALSE	canonical	3	2674	junction_4	151.532174801261	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9077372	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.41	chr11	+	5604	3	ISM	ENSMUSG00000020407.14	ENSMUST00000146696.2	813	4	-4059	-82	3273	0	intron_retention	FALSE	canonical	3	3010	junction_1	1	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9078955	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_9083349_9084721_9084932_9085163
ES.4298.42	chr11	+	5419	3	NIC	ENSMUSG00000020407.14	novel	813	4	NA	NA	-3152	-1	intron_retention	FALSE	canonical	3	2674	junction_2	169	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACATTGTGTGACTCTG	NA	False	NA	19	True	AATAAA	-13	NA	9079862	9086163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9084932_9085163_9085311_9085960
ES.4298.43	chr11	+	5347	2	NIC	ENSMUSG00000020407.14	novel	1277	9	NA	NA	-2429	0	intron_retention	FALSE	canonical	3	3012	junction_1	0	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9080585	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9084932_9085163
ES.4298.5	chr11	+	1500	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	-244	-4	18	1	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACTCTGCGGTAGAG	NA	False	NA	27	True	AATAAA	-21	NA	9068262	9086171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.6	chr11	+	1192	10	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	884.722234432234	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068283	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068351_9068630_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.7	chr11	+	2691	8	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	8	-1	intron_retention	FALSE	canonical	3	2502	junction_1	170.443718641931	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068514	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.8	chr11	+	2590	7	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_1	1064.14624099426	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068534	9086164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_9068661_9075632_9075699_9079487_9079606_9081629_9083349_9084721_9084932_9085163_9085311_9085960
ES.4298.9	chr11	+	1276	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	935.99662793196	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGACTCTGCGGTAG	NA	False	NA	25	True	AATAAA	-19	NA	9068534	9086169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_9068711_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ES.4299.1	chr11	-	7783	1	Antisense	novelGene_ENSMUSG00000020407.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-38	NA	9077840	9070057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_9070100_9077800
ES.43.1	chr1	+	4196	6	NIC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-78	85	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	57.3006108169887	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTGGCCTGCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7159065	7242968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.10	chr1	+	4620	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	12	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	64.1022779690108	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159165	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7223039_7223144_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.11	chr1	+	3921	3	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	15	82	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159168	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7190417_7190840_7239738
ES.43.12	chr1	+	4783	5	FSM	ENSMUSG00000051285.18	ENSMUST00000182114.8	770	5	17	-4030	17	0	multi-exon	FALSE	canonical	3	49	junction_1	40.8495716011808	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTGAGGTGTTCT	NA	False	NA	5	True	NA	NA	NA	7159170	7243852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7159441_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.13	chr1	+	4503	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	23	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.3389420808314	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159176	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7228995_7229203_7231115_7231288_7233471_7233596_7239738
ES.43.15	chr1	+	4533	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	27	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.6308197158512	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATCCAGTGGCCTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	7159180	7242963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7224875_7224915_7225307_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.16	chr1	+	4284	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	37	84	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	49.9623858517585	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGGCCTGCCTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	7159190	7242967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.17	chr1	+	4414	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	40	79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.7776084008591	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTATCCAGTGGCCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	7159193	7242962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7164379_7164502_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.18	chr1	+	4575	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	41	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	66.7841481863742	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159194	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7223039_7223144_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.19	chr1	+	4474	7	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	53	82	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	53.9804491356722	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159206	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7190417_7190840_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.2	chr1	+	4361	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	-12	883	-12	86	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCCTGCCTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	7159131	7242969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.21	chr1	+	3746	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	77	-189	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	64.1022779690108	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGACTTTATGGTTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	7159230	7242157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7223039_7223144_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.23	chr1	+	4912	6	NIC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	81	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	57.3006108169887	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTGAGGTGTTCTT	NA	False	NA	6	True	NA	NA	NA	7159234	7243853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.24	chr1	+	4522	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-85	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	64.2603124416777	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATCCAGTGGCCTGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	7159242	7242964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7225303_7225496_7226395_7226481_7231115_7231288_7233471_7233596_7239738
ES.43.25	chr1	+	4832	4	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-78	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	58.116740751315	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGAGGTGTTCTTG	NA	False	NA	7	True	NA	NA	NA	7159249	7243854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7190417_7190840_7217860_7217964_7239738
ES.43.26	chr1	+	4372	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-78	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.549630648459	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159249	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7161082_7161216_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.27	chr1	+	2778	5	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	114	8483	-70	1774	5prime_fragment	FALSE	canonical	3	103	junction_2	18.2893411581719	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTCATTTAATTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	7159257	7235369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471
ES.43.28	chr1	+	4086	7	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-70	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.2387451558686	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159257	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7217860_7217964_7225303_7225496_7226395_7226481_7231115_7231288_7233471_7233596_7239738
ES.43.29	chr1	+	4084	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-70	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	64.7252655459983	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7159257	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233571_7239844
ES.43.3	chr1	+	3925	5	FSM	ENSMUSG00000051285.18	ENSMUST00000182114.8	770	5	-10	-3145	0	84	multi-exon	FALSE	canonical	3	49	junction_1	40.8495716011808	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCAGTGGCCTGCCTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	7159143	7242967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7159441_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.30	chr1	+	5299	1	NIC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-54	-66554	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACACAAATAGTCAAG	NA	False	NA	NA	False	NA	NA	NA	7159273	7164572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159300_7164600
ES.43.31	chr1	+	3786	7	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-44	80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	59.9879617553018	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATCCAGTGGCCTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	7159283	7242963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738_7242385_7242571
ES.43.32	chr1	+	4458	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-37	81	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.9358511058559	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTATCCAGTGGCCTGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	7159290	7242964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7225303_7225496_7226395_7226481_7231115_7231288_7233471_7233596_7239738
ES.43.33	chr1	+	3389	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	148	1695	-36	-189	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGACTTTATGGTTGAC	NA	False	NA	NA	False	TTTAAA	-16	NA	7159291	7242157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.34	chr1	+	4608	9	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-5	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.7953023720724	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATCCAGTGGCCTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	7159384	7242963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7223039_7223144_7225303_7225496_7231115_7231288_7233471_7233596_7236532_7236743_7239738
ES.43.35	chr1	+	5133	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	5	1772	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.5100243071173	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTCTCATTTAATTTG	NA	False	NA	NA	False	AATAAA	-14	NA	7159394	7235367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7223039_7225496_7229164_7229203_7231115_7231288_7233471
ES.43.36	chr1	+	1673	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6040	False	NA	NA	False	NA	NA	NA	7183715	7185388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7183700_7185400
ES.43.37	chr1	+	3769	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTCTACATTAATATG	2099	False	NA	NA	False	NA	NA	NA	7192416	7196185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7192400_7196200
ES.43.38	chr1	+	3891	6	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-21376	80	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	64.5773954259538	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATCCAGTGGCCTGCC	6167	False	NA	NA	False	AATAAA	-20	NA	7196484	7242963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7196560_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.39	chr1	+	4029	7	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-21375	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.2251606336662	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	6168	False	NA	NA	False	AATAAA	-22	NA	7196485	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7196560_7217860_7217964_7224777_7224915_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.4	chr1	+	5233	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	3	-4	3	4	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGAGGTGTTCTTGAA	NA	False	NA	9	True	NA	NA	NA	7159146	7243856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.40	chr1	+	3678	5	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-21353	82	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	60.387809200202	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	6190	False	NA	NA	False	AATAAA	-22	NA	7196507	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7196560_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.41	chr1	+	10253	4	NNC	ENSMUSG00000051285.18	novel	1153	5	NA	NA	-2617	83	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	68.4754619472471	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7222473	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7229203_7231115_7231288_7233471_7233596_7239738
ES.43.42	chr1	+	6517	4	ISM	ENSMUSG00000051285.18	ENSMUST00000182675.8	1153	5	4644	-2668	-2586	85	3prime_fragment	FALSE	canonical	3	23	junction_1	59.0668171555645	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTGGCCTGCCTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	7222504	7242968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.43	chr1	+	10075	4	NNC	ENSMUSG00000051285.18	novel	3986	4	NA	NA	-579	86	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	69.8872107200038	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCCTGCCTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	7224511	7242969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7227457_7227512_7231288_7233471_7233596_7239738
ES.43.44	chr1	+	5123	4	ISM	ENSMUSG00000051285.18	ENSMUST00000182675.8	1153	5	6919	-3549	-311	-3	3prime_fragment	FALSE	canonical	3	23	junction_1	59.0668171555645	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTTTTTTGAGGTGT	NA	False	NA	2	True	NA	NA	NA	7224779	7243849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.45	chr1	+	7589	4	NNC	ENSMUSG00000051285.18	novel	3986	4	NA	NA	1921	82	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.8872107200038	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7227011	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7227451_7227488_7231288_7233471_7233596_7239738
ES.43.46	chr1	+	6916	4	FSM	ENSMUSG00000051285.18	ENSMUST00000183204.2	3986	4	-2850	-80	-2378	80	multi-exon	FALSE	canonical	0	0	junction_2	72.1248916810278	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTATCCAGTGGCCTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	7227930	7242963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7231288_7233471_7233596_7236532_7236743_7239738
ES.43.47	chr1	+	4547	3	FSM	ENSMUSG00000051285.18	ENSMUST00000182892.8	4207	3	673	-1013	201	3	multi-exon	FALSE	canonical	3	143	junction_2	5	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGAGGTGTTCTTGA	NA	False	NA	8	True	NA	NA	NA	7230981	7243855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7231288_7233471_7233596_7239738
ES.43.48	chr1	+	3595	4	NNC	ENSMUSG00000051285.18	novel	3986	4	NA	NA	368	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.8903486027312	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCCAGTGGCCTGCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	7231148	7242965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7231288_7233471_7233596_7237006_7237112_7239738
ES.43.5	chr1	+	3625	3	NIC	ENSMUSG00000051285.18	novel	770	5	NA	NA	3	83	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	24	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159146	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_7159441_7217860_7217964_7239738
ES.43.6	chr1	+	4519	7	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	3	83	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	61.5485355002231	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159146	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.7	chr1	+	4647	8	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	-2	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.5616498698165	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCAGTGGCCTGCCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	7159151	7242966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7161082_7161216_7190417_7190824_7217860_7217964_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.43.8	chr1	+	5196	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	49.9623858517585	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTGAGGTGTTCT	NA	False	NA	5	True	NA	NA	NA	7159163	7243852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ES.43.9	chr1	+	4957	9	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	11	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.7300349916231	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTGTCATTTTAA	NA	False	NA	NA	False	NA	NA	NA	7159164	7242121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7159441_7190417_7190840_7217860_7217964_7223039_7223144_7223733_7224915_7225303_7225496_7231115_7231288_7233471_7233596_7239738
ES.430.1	chr1	-	2508	1	Genic_Genomic	ENSMUSG00000026107.12	novel	NA	NA	NA	NA	5918	891	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTAGATGTCTTCCT	6540	False	NA	NA	False	AATAAA	-18	NA	51506637	51504129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_51504100_51506600
ES.430.2	chr1	-	2878	1	ISM	ENSMUSG00000026107.12	ENSMUST00000189542.7	4790	8	9514	146	4511	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGAGTCCTGTATCTGT	5133	False	NA	NA	False	AAAACA	-22	NA	51508044	51505166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51505200_51508000
ES.4300.1	chr11	+	9154	4	Intergenic	novelGene_3304	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTCAGTCCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	9366295	9376877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_9367286_9368054_9369309_9369867_9370252_9370351
ES.4301.1	chr11	+	5263	27	ISM	ENSMUSG00000004668.15	ENSMUST00000042740.13	16011	62	238701	-612	237192	612	3prime_fragment	TRUE	canonical	0	0	junction_2	0.481921695620833	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTGTGCCAGTGTCT	NA	False	NA	NA	False	AATAAA	-39	NA	9380642	9634871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_9380684_9381726_9381908_9384107_9384327_9401338_9401536_9414908_9415067_9416371_9416603_9433809_9433916_9460460_9460732_9472335_9472420_9478977_9479048_9482364_9482484_9484444_9484533_9492061_9492174_9516275_9516331_9517667_9517846_9520544_9520661_9527150_9527308_9531493_9531748_9535350_9535547_9538387_9538498_9565656_9565808_9571870_9572006_9578564_9578669_9586543_9586637_9629823_9629930_9631949_9632088_9633278
ES.4302.1	chr11	+	6080	1	Intergenic	novelGene_3305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCTGTAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	9758014	9764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_9758000_9764100
ES.4303.1	chr11	+	3774	2	Intergenic	novelGene_3306	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10479310	10485830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_10481413_10484158
ES.4304.1	chr11	+	178	1	Intergenic	novelGene_3307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGTAGAGTATGT	NA	False	NA	NA	False	NA	NA	NA	10672631	10672809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_10672600_10672800
ES.4305.1	chr11	+	175	1	Intergenic	novelGene_3308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGTAGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	11203177	11203352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11203200_11203400
ES.4306.1	chr11	+	1570	1	Genic_Genomic	ENSMUSG00000020191.12	novel	NA	NA	NA	NA	-22	-24896	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAACCCGAAAAGTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	11412071	11413641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_11412100_11413600
ES.4306.2	chr11	+	2060	1	NIC	ENSMUSG00000020191.12	novel	330	3	NA	NA	45	-24339	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11412138	11414198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_11412100_11414200
ES.4307.1	chr11	-	4024	7	NIC	ENSMUSG00000020193.4	novel	4248	8	NA	NA	149	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.62476052848859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTAGCCATGAGAAAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	11412259	11229623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_11232698_11302521_11302700_11358388_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
ES.4307.2	chr11	-	3986	8	NNC	ENSMUSG00000020193.4	novel	4248	8	NA	NA	152	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.81190401832181	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTAGCCATGAGAAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	11412256	11229624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11232698_11302521_11302700_11353980_11354058_11358499_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
ES.4307.3	chr11	-	4092	8	NNC	ENSMUSG00000020193.4	novel	4248	8	NA	NA	162	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.71052370871575	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGTAGCCATGAGA	NA	False	NA	NA	False	AATAAA	-15	NA	11412246	11229628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11232698_11302521_11302700_11358388_11358608_11365187_11365360_11368161_11368288_11379062_11379127_11409698_11409780_11412063
ES.4307.4	chr11	-	4089	8	FSM	ENSMUSG00000020193.4	ENSMUST00000020413.4	4248	8	151	8	151	-8	multi-exon	FALSE	canonical	0	0	junction_2	3.65892813567591	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGCAGGAGTAGCCA	NA	False	NA	NA	False	AATAAA	-10	NA	11412257	11229633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11232698_11302521_11302700_11353980_11354058_11358388_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
ES.4307.5	chr11	-	1094	8	NNC	ENSMUSG00000020193.4	novel	4248	8	NA	NA	174	-2869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.81190401832181	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATACGGTGTCCTCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	11412234	11232494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11232698_11302521_11302700_11353980_11354058_11358499_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
ES.4307.6	chr11	-	906	5	ISM	ENSMUSG00000020193.4	ENSMUST00000020413.4	4248	8	172	128606	172	-128606	5prime_fragment	FALSE	canonical	2	5	junction_1	2.48746859276655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTGACTTGTGTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	11412236	11358231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_11358608_11365187_11365338_11368161_11368288_11409698_11409780_11412063
ES.4308.1	chr11	+	3786	6	NIC	ENSMUSG00000018654.18	novel	446	4	NA	NA	16	-67	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.89736659610103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCTGTATCAGAAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	11635018	11722045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_11635175_11650204_11650259_11657784_11657905_11704006_11704175_11708194_11708318_11718880
ES.4308.2	chr11	+	3975	7	NIC	ENSMUSG00000018654.18	novel	446	4	NA	NA	44	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.59861050777091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCACTGTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	11635046	11722104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_11635198_11650204_11650259_11657784_11657905_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ES.4308.3	chr11	+	3996	7	NNC	ENSMUSG00000018654.18	novel	242	3	NA	NA	-405	-67	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.15470053837925	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCTGTATCAGAAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	11635519	11722045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_11635751_11650204_11650259_11657784_11657905_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ES.4308.4	chr11	+	4641	8	FSM	ENSMUSG00000018654.18	ENSMUST00000076700.11	5163	8	-547	1069	-259	-255	multi-exon	FALSE	canonical	0	0	junction_1	1.8405855323893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGGAGCTCTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	11635665	11721857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_11636469_11650204_11650259_11657784_11657905_11698310_11698572_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ES.4308.5	chr11	+	3759	6	NNC	ENSMUSG00000018654.18	novel	242	3	NA	NA	-244	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.62480768092719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCACTGTTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	11635680	11722104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_11635751_11650204_11650259_11657784_11657905_11704006_11704175_11708194_11708318_11718880
ES.4308.6	chr11	+	4087	8	NNC	ENSMUSG00000018654.18	novel	242	3	NA	NA	-236	-68	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.38505138783324	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGCTGTATCAGAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	11635688	11722044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_11635751_11650204_11650259_11657784_11657905_11698310_11698572_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ES.4308.7	chr11	+	4942	9	NNC	ENSMUSG00000018654.18	novel	4697	9	NA	NA	-173	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.06155281280883	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCACTGTTTGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	11635751	11722106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_11636469_11649333_11649472_11650204_11650259_11657784_11657905_11698310_11698572_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ES.4308.8	chr11	+	5999	1	NIC	ENSMUSG00000018654.18	novel	4697	9	NA	NA	79604	-65	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGTATCAGAAGTTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	11716048	11722047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_11716000_11722000
ES.4309.1	chr11	+	179	1	Intergenic	novelGene_3309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	309	False	NA	NA	False	NA	NA	NA	11744437	11744616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11744400_11744600
ES.431.1	chr1	-	2652	6	FSM	ENSMUSG00000026107.12	ENSMUST00000185534.2	708	6	2	-1946	2	292	multi-exon	FALSE	canonical	1	1	junction_5	22.105203007437	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGATACTGGGATTTAA	NA	False	NA	NA	False	AATAGA	-14	NA	51517556	51508354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517459
ES.431.2	chr1	-	2918	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	-82	2	-56	-2	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATAGGAGTAACAGAA	NA	False	NA	-3	True	AATAAA	-30	NA	51517640	51508648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ES.431.3	chr1	-	2690	6	NNC	ENSMUSG00000026107.12	novel	2838	6	NA	NA	-15	-10	intron_retention	FALSE	canonical	0	0	junction_5	22.4997777766804	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAAGATATAGGAG	NA	False	NA	-11	True	AATAAA	-22	NA	51517599	51508656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517162
ES.431.4	chr1	-	2018	5	FSM	ENSMUSG00000026107.12	ENSMUST00000186684.7	2677	5	-40	699	-14	251	multi-exon	FALSE	canonical	3	52	junction_2	4.09267638593623	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCCTGAATGCTTTAT	NA	False	NA	NA	False	AAGAAA	-11	NA	51517598	51509714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636
ES.4310.1	chr11	+	4810	1	Antisense	novelGene_ENSMUSG00000035455.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCCTGACATTTGCAG	6492	False	NA	NA	False	NA	NA	NA	11750620	11755430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_11750600_11755400
ES.4311.1	chr11	-	4462	1	Intergenic	novelGene_3310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAATACTTGTAAGGATAA	NA	False	NA	NA	False	NA	NA	NA	11749874	11745412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_11745400_11749900
ES.4311.10	chr11	-	3015	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	-1	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	-7	True	AATAAA	-22	NA	11758960	11750373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
ES.4311.11	chr11	-	3196	4	NNC	ENSMUSG00000035455.13	novel	2807	3	NA	NA	220	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.8423039781937	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758705	11750374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11755958_11756216_11758021_11758161_11758594
ES.4311.12	chr11	-	3017	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	3	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	296.98484809835	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758929	11750374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11757997_11758161_11758884
ES.4311.13	chr11	-	1366	3	NNC	ENSMUSG00000035455.13	novel	2807	3	NA	NA	-9	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACGGAGTTGCTTCATT	NA	False	NA	-8	True	AATAAA	-21	NA	11758971	11750374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11751451_11752850_11753064_11758894
ES.4311.14	chr11	-	2999	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	-16	-176	0	-88	multi-exon	FALSE	canonical	3	23	junction_1	194	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758948	11750375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11755958_11756216_11758894
ES.4311.15	chr11	-	3695	1	NIC	ENSMUSG00000035455.13	novel	2092	4	NA	NA	-2610	-89	mono-exon	FALSE	NA	NA	NA	NA	NA	472	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11754071	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_11750400_11754100
ES.4311.16	chr11	-	3144	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	1	-89	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_2	266.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758931	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758594
ES.4311.17	chr11	-	2732	2	NIC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	3	-89	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758929	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_11753064_11758884
ES.4311.18	chr11	-	2988	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	13	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758912	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11757997_11758161_11758894
ES.4311.19	chr11	-	3202	5	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	-7	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	267.168837067499	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758939	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758021_11758161_11758594
ES.4311.2	chr11	-	3451	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	0	-490	0	490	multi-exon	FALSE	canonical	3	411	junction_2	109.5	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAGTGTTCAATCTAT	NA	False	NA	NA	False	NA	NA	NA	11758959	11749797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11756095_11756216_11758894
ES.4311.20	chr11	-	1487	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	3	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	261.147467918033	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACGGAGTTGCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	11758929	11750376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11751496_11752850_11753064_11756095_11756216_11758894
ES.4311.22	chr11	-	1686	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	3	-91	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	253.632717833397	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGACGGAGTTGCTT	NA	False	NA	-12	True	AATAAA	-17	NA	11758929	11750378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11751697_11752850_11753064_11756095_11756216_11758894
ES.4311.23	chr11	-	2798	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	-4	-91	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	272.570887823496	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGACGGAGTTGCTT	NA	False	NA	-12	True	AATAAA	-17	NA	11758966	11750378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758884
ES.4311.24	chr11	-	3034	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	12	-92	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	264.90543386063	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTGACGGAGTTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	11758913	11750379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758594
ES.4311.25	chr11	-	5041	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	3	-93	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	315	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTTGACGGAGTTGC	NA	False	NA	-14	True	AATAAA	-15	NA	11758929	11750380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756846_11757321
ES.4311.26	chr11	-	2923	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	0	-94	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	315	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCATTTTGACGGAGTTG	NA	False	NA	-15	True	AATAAA	-14	NA	11758948	11750381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758827
ES.4311.27	chr11	-	1578	5	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	1	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	270.973591886737	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCATTTTGACGGAGTTG	NA	False	NA	-15	True	AATAAA	-14	NA	11758931	11750381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11751451_11752850_11753064_11756095_11756216_11758021_11758161_11758894
ES.4311.28	chr11	-	2712	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	28	221	1	43	multi-exon	FALSE	canonical	3	411	junction_2	109.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATAAGTGTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	11758931	11750508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11756095_11756216_11758894
ES.4311.29	chr11	-	2813	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTAATCTTGTATCAG	NA	False	NA	NA	False	AATAAA	-18	NA	11758929	11750544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
ES.4311.3	chr11	-	2593	1	Genic_Genomic	ENSMUSG00000035455.13	novel	NA	NA	NA	NA	-1222	197	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCCTGTTTTGTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	11752683	11750090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_11750100_11752700
ES.4311.30	chr11	-	2821	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	-14	0	2	0	multi-exon	FALSE	canonical	3	23	junction_1	194	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11758946	11750551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11755958_11756216_11758894
ES.4311.31	chr11	-	2720	5	NNC	ENSMUSG00000035455.13	novel	2807	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	265.173999479587	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11758932	11750551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758021_11758161_11758894
ES.4311.32	chr11	-	2942	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	5	-16	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_2	266.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACATGTTAGAAAT	NA	False	NA	NA	False	ATTAAA	-8	NA	11758920	11750567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758594
ES.4311.33	chr11	-	2544	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	-18	435	-15	-171	multi-exon	FALSE	canonical	3	411	junction_2	109.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATTATTGCTTACATT	NA	False	NA	NA	False	AATAAA	-14	NA	11758977	11750722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11756095_11756216_11758894
ES.4311.34	chr11	-	2319	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	18	-247	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	272.570887823496	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAATGACCTTTTGTT	NA	False	NA	NA	False	TATAAA	-13	NA	11758907	11750798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758884
ES.4311.35	chr11	-	2560	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	1	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	293.968630223627	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAATGACCTTTTGT	NA	False	NA	NA	False	TATAAA	-12	NA	11758931	11750799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758894
ES.4311.4	chr11	-	3261	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	-379	79	-376	-79	multi-exon	FALSE	canonical	3	411	junction_2	109.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTCATTTTGCTATA	NA	False	NA	0	True	AATAAA	-29	NA	11759338	11750366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11756095_11756216_11758894
ES.4311.5	chr11	-	2893	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	-2	83	-2	-83	multi-exon	FALSE	canonical	3	61	junction_2	284.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGTTGCTTCATTTTGC	NA	False	NA	-4	True	AATAAA	-25	NA	11758964	11750370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11756095_11756216_11758884
ES.4311.6	chr11	-	4965	3	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	4	-83	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	315	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGTTGCTTCATTTTGC	NA	False	NA	-4	True	AATAAA	-25	NA	11758944	11750370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756833_11757409
ES.4311.7	chr11	-	3026	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	0	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	296.98484809835	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGAGTTGCTTCATTTTG	NA	False	NA	-5	True	AATAAA	-24	NA	11758959	11750371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758884
ES.4311.8	chr11	-	3286	4	NNC	ENSMUSG00000035455.13	novel	2974	3	NA	NA	3	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	296.98484809835	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGAGTTGCTTCATTTTG	NA	False	NA	-5	True	AATAAA	-24	NA	11758929	11750371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11753064_11756095_11756216_11758021_11758161_11758594
ES.4311.9	chr11	-	3087	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	-329	86	-329	-86	multi-exon	FALSE	canonical	3	48	junction_1	0	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGGAGTTGCTTCATTT	NA	False	NA	-7	True	AATAAA	-22	NA	11759291	11750373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11753064_11758894
ES.4312.1	chr11	+	332	1	Intergenic	novelGene_3312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCAGGGTTGACACTG	NA	False	NA	NA	False	NA	NA	NA	11807041	11807373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11807000_11807400
ES.4313.1	chr11	+	209	1	Intergenic	novelGene_3313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTACTTCCTAGCAT	6490	False	NA	NA	False	NA	NA	NA	11816296	11816505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11816300_11816500
ES.4314.1	chr11	+	2307	3	Genic_Genomic	ENSMUSG00000086391.2	novel	1075	4	NA	NA	1108	-12903	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAATTCCAATCATTCA	9424	False	NA	NA	False	NA	NA	NA	11819230	11822418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_11819590_11819710_11820344_11821103
ES.4315.1	chr11	+	1065	3	NNC	ENSMUSG00000086391.2	novel	1075	4	NA	NA	13994	-12	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCGTTCAGCCTTGTA	2713	False	NA	NA	False	NA	NA	NA	11832116	11835309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_11832389_11832956_11833080_11834639
ES.4315.2	chr11	+	1504	2	ISM	ENSMUSG00000086391.2	ENSMUST00000151032.2	1075	4	14129	6	14129	-6	3prime_fragment	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCAGCCTTGTAAATATT	2848	False	NA	NA	False	NA	NA	NA	11832251	11835315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_11833080_11834639
ES.4316.1	chr11	-	3200	1	Genic_Genomic	ENSMUSG00000020182.17	novel	NA	NA	NA	NA	7120	1499	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAACAAA	4130	False	NA	NA	False	NA	NA	NA	11765801	11762601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_11762600_11765800
ES.4316.10	chr11	-	984	6	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	3569	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.6550094376141	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11782711	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11782655
ES.4316.12	chr11	-	2277	14	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-2019	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.0072107260464	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	3619	False	NA	-3	True	AATAAA	-19	NA	11832648	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11832251
ES.4316.13	chr11	-	1032	5	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	-1680	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.0271658914602	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11774601	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774403
ES.4316.14	chr11	-	2001	14	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-496	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.4134933591437	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATTGAGTAAGCGT	5142	False	NA	-4	True	AATAAA	-18	NA	11831125	11764103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831003
ES.4316.15	chr11	-	1886	13	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-844	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.5150236222531	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATTGAGTAAGCGT	4794	False	NA	-4	True	AATAAA	-18	NA	11831473	11764103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367
ES.4316.16	chr11	-	930	5	FSM	ENSMUSG00000020182.17	ENSMUST00000136810.8	964	5	33	1	33	-1	multi-exon	FALSE	canonical	0	0	junction_4	46.0271658914602	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTATTGAGTAAGCGT	NA	False	NA	-4	True	AATAAA	-18	NA	11772888	11764103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772791
ES.4316.17	chr11	-	1019	6	NNC	ENSMUSG00000020182.17	novel	964	5	NA	NA	-30	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.1992187440394	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTAACTGTATTGAGTA	NA	False	NA	-9	True	AATAAA	-13	NA	11772951	11764108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11769568_11769587_11772194_11772294_11772778
ES.4316.18	chr11	-	6038	1	Intergenic	novelGene_3311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAACAAAGCAATAGGA	285	False	NA	NA	False	NA	NA	NA	11808660	11802622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_11802600_11808700
ES.4316.19	chr11	-	565	4	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	7384	-6783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7872274704859	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGGTTCACTGGAAG	NA	False	NA	NA	False	ATTAAA	-35	NA	11823245	11803440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11803615_11813650_11813795_11814893_11815029_11823133
ES.4316.2	chr11	-	1940	14	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	1	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	33.1774857716822	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTAAGCGTCTTGTT	NA	False	NA	2	True	AATAAA	-24	NA	11840397	11764097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772306_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11840337
ES.4316.20	chr11	-	852	6	NNC	ENSMUSG00000020182.17	novel	1922	15	NA	NA	-513	-2537	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	23.9215384120671	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTGTATTTACTTGAC	5125	False	NA	NA	False	AATAAA	-20	NA	11831142	11814377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11814513_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831003
ES.4316.3	chr11	-	2075	14	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-350	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.5340505215027	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	5288	False	NA	-3	True	AATAAA	-19	NA	11830979	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11830784
ES.4316.4	chr11	-	2036	14	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-784	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.5340505215027	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	4854	False	NA	-3	True	AATAAA	-19	NA	11831413	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831257
ES.4316.5	chr11	-	2193	15	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-1663	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.8852354820425	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	3975	False	NA	-3	True	AATAAA	-19	NA	11832292	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11831367_11831640_11832251
ES.4316.6	chr11	-	1995	2	ISM	ENSMUSG00000020182.17	ENSMUST00000136810.8	964	5	6131	0	6131	0	3prime_fragment	FALSE	canonical	3	119	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	3141	False	NA	-3	True	AATAAA	-19	NA	11766790	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_11764518_11765210
ES.4316.7	chr11	-	1568	12	ISM	ENSMUSG00000020182.17	ENSMUST00000109659.9	1954	15	17147	0	7368	0	3prime_fragment	FALSE	canonical	3	45	junction_6	24.3211977738973	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11823261	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
ES.4316.9	chr11	-	4903	13	NNC	ENSMUSG00000020182.17	novel	1954	15	NA	NA	-1843	0	intron_retention	FALSE	non_canonical	0	0	junction_3	30.3118055476007	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	3795	False	NA	-3	True	AATAAA	-19	NA	11832472	11764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11764518_11765210_11765429_11769290_11772294_11779084_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11832251
ES.4317.1	chr11	+	1301	1	Intergenic	novelGene_3314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGCTGTAATATTGA	NA	False	NA	NA	False	NA	NA	NA	11854407	11855708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11854400_11855700
ES.4318.1	chr11	-	3254	1	FSM	ENSMUSG00000087990.4	ENSMUST00000157365.4	128	1	-2257	-869	-2257	869	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAAACATTCTTAACAT	7234	False	NA	NA	False	NA	NA	NA	11866005	11862751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11862800_11866000
ES.4319.1	chr11	-	2986	1	Intergenic	novelGene_3315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAAAGGAAGACAT	9742	False	NA	NA	False	NA	NA	NA	11871400	11868414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_11868400_11871400
ES.432.1	chr1	+	223	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAAAAGGAC	NA	False	NA	NA	False	AATAAA	-10	NA	51560387	51560610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_51560400_51560600
ES.4320.1	chr11	+	3022	1	Intergenic	novelGene_3316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	11872242	11875264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_11872200_11875300
ES.4321.1	chr11	+	5781	1	Antisense	novelGene_ENSMUSG00000020176.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCATTTGTTGTAATAA	NA	False	NA	NA	False	ATTAAA	-21	NA	11875967	11881748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_11876000_11881700
ES.4322.1	chr11	+	3418	1	Antisense	novelGene_ENSMUSG00000020176.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACAGGAGTTTAACATT	NA	False	NA	NA	False	AATAAA	-36	NA	11888022	11891440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_11888000_11891400
ES.4323.1	chr11	-	5080	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	-19	0	-19	0	multi-exon	FALSE	canonical	3	35	junction_14	7.38135319572231	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987420	11880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4323.10	chr11	-	2770	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	3	2288	3	298	multi-exon	FALSE	canonical	3	35	junction_14	7.38135319572231	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGCAGTCAAGCTGCCAC	NA	False	NA	NA	False	GATAAA	-37	NA	11987398	11882795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4323.11	chr11	-	4643	12	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	0	4058	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	20.202691908025	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTTAGTAACTGAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	11987401	11890831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11907751_11907827_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4323.12	chr11	-	5320	1	Intergenic	novelGene_3317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAGCCTCAAATCAAGA	NA	False	NA	NA	False	NA	NA	NA	11913731	11908411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_11908400_11913700
ES.4323.3	chr11	-	5110	18	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	16.8366875733592	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987399	11880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11980244_11980296_11987191
ES.4323.4	chr11	-	4961	16	NIC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	21	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_15	13.6098003904049	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987380	11880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11987191
ES.4323.5	chr11	-	5306	12	NNC	ENSMUSG00000020176.18	novel	4755	16	NA	NA	-2117	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	14.82905345753	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11898447	11880507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11897217
ES.4323.6	chr11	-	4894	16	NIC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	14.3396885135859	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCCTGTCGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	11987400	11880508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4323.7	chr11	-	5131	18	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	16.8867590069198	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTGTCCTGTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	11987398	11880509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11907751_11907827_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4323.8	chr11	-	5043	17	NNC	ENSMUSG00000020176.18	novel	5061	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.0618055384079	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTGTCCTGTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	11987398	11880509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_11883610_11884198_11884293_11886730_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ES.4324.1	chr11	+	135	1	Intergenic	novelGene_3318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	12229360	12229495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_12229400_12229500
ES.4325.1	chr11	+	178	1	Intergenic	novelGene_3319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	12351710	12351888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_12351700_12351900
ES.4326.1	chr11	+	180	1	Intergenic	novelGene_3320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	12373883	12374063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_12373900_12374100
ES.4327.1	chr11	+	3281	1	Intergenic	novelGene_3321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGAACAGCCGGGCGT	NA	False	NA	NA	False	NA	NA	NA	12383578	12386859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_12383600_12386900
ES.4328.1	chr11	-	8253	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	22	-2734	19	2664	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGGCTCCATTGTCCT	NA	False	NA	NA	False	CATAAA	-9	NA	12414938	12183943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.100	chr11	-	7133	14	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	-30	-7399	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	134.65102824815	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTCAGGAAGCCCC	NA	False	NA	NA	False	TTTAAA	-6	NA	12414990	12194509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12197550_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.101	chr11	-	7281	15	NNC	ENSMUSG00000020173.18	novel	3463	9	NA	NA	-8	-7400	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	136.664567762214	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGTCAGGAAGCCC	NA	False	NA	NA	False	TTTAAA	-5	NA	12414968	12194510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12197550_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.102	chr11	-	6923	13	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	20	-7481	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	159.588533422674	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTGTGTTCTCCAGT	NA	False	NA	NA	False	AATAAA	-19	NA	12414937	12194591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12197550_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.103	chr11	-	7191	15	NNC	ENSMUSG00000020173.18	novel	3463	9	NA	NA	5	-7483	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	151.36117098395	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTTTTGTGTTCTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	12414952	12194593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12197550_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.104	chr11	-	6744	14	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	19	-7745	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	152.281932553565	816	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCCTCCCTGGCTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	12414938	12194855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12197550_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.105	chr11	-	1687	1	NIC	ENSMUSG00000020173.18	novel	5271	13	NA	NA	119972	-10871	mono-exon	FALSE	NA	NA	NA	NA	NA	802	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATTGATGAGTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	12199668	12197981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12198000_12199700
ES.4328.106	chr11	-	3380	11	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-1	13621	combination_of_known_junctions	FALSE	canonical	3	235	junction_3	81.408169123252	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTCTGGGAGGATACT	NA	False	NA	NA	False	NA	NA	NA	12414958	12203385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.107	chr11	-	2477	10	NNC	ENSMUSG00000020173.18	novel	3463	9	NA	NA	-11	7991	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.451263981745	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTTTGAGGACATGA	NA	False	NA	NA	False	NA	NA	NA	12414870	12238371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12239359_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.108	chr11	-	3279	9	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	-1	4958	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	147.077998014659	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGATTTGCCTGAAATCA	NA	False	NA	NA	False	NA	NA	NA	12414958	12241404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12243277_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.109	chr11	-	3357	9	NNC	ENSMUSG00000020173.18	novel	3463	9	NA	NA	8	4949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.713856525318	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATCAACCGATTTGC	NA	False	NA	NA	False	NA	NA	NA	12414949	12241413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12243277_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.11	chr11	-	5713	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	116.000901650261	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415046	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.110	chr11	-	2166	8	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	9	3930	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	181.312223661229	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTTTCTCTTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	12414948	12242432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12243277_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.111	chr11	-	1574	8	ISM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	11	70200	8	-2011	5prime_fragment	FALSE	canonical	3	119	junction_3	133.871702211712	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCCCTTCTTGCTTTTG	NA	False	NA	NA	False	TATAAA	-12	NA	12414949	12256877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.112	chr11	-	1755	9	NNC	ENSMUSG00000020173.18	novel	648	6	NA	NA	-133	-3273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.264812916508	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACATACATAAACTAAACA	NA	False	NA	NA	False	NA	NA	NA	12415093	12258139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12258353_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.113	chr11	-	4533	1	Intergenic	novelGene_3322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	623	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAACTCTAGACAGATAAA	NA	False	NA	NA	False	NA	NA	NA	12395271	12390738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_12390700_12395300
ES.4328.12	chr11	-	5075	12	FSM	ENSMUSG00000020173.18	ENSMUST00000172956.8	4488	12	-152	-435	5	0	multi-exon	FALSE	canonical	0	0	junction_5	160.352504251835	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414952	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.13	chr11	-	4409	9	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	154.729602856079	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414873	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204855_12319652_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.14	chr11	-	5440	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.474675873027	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414873	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12344838_12344910_12414681
ES.4328.16	chr11	-	5629	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	-86	-2	-86	0	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415046	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.17	chr11	-	4149	7	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	223.911006627385	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415039	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12259613_12259681_12414706
ES.4328.2	chr11	-	8064	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-13	2628	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCAGATCAAACAAATCAC	NA	False	NA	NA	False	AATAAA	-14	NA	12414872	12183979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.20	chr11	-	5604	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	135.295764447935	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414958	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293755_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.22	chr11	-	5288	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	151.619150716212	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414653	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
ES.4328.23	chr11	-	5448	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	135.821536568831	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414651	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
ES.4328.24	chr11	-	5584	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415088	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.25	chr11	-	5464	13	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	-84	-1	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_8	139.626958356902	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGTGTGGACTTCATG	NA	False	NA	-2	True	AATAAA	-19	NA	12415044	12186676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.26	chr11	-	5163	13	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	152.776797976656	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414958	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.29	chr11	-	5255	14	NNC	ENSMUSG00000020173.18	novel	5451	15	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	135.535711139474	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414653	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414564
ES.4328.3	chr11	-	6078	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-458	-5	-455	5	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGACTTCATGCTACAG	NA	False	NA	4	True	AATAAA	-25	NA	12415415	12186670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.32	chr11	-	2747	9	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	41	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	149.264812916508	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414916	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.33	chr11	-	5022	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	132.038105198802	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414969	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12203278_12203709_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.36	chr11	-	5175	13	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	131.814263264641	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414979	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.37	chr11	-	5497	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	151.702644366182	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12415016	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199901_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.38	chr11	-	5246	14	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	29	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	169.979880466229	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414928	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681_12414763_12414863
ES.4328.39	chr11	-	3521	4	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	114827	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.783045667526	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12204813	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188090_12199649_12199914_12201022_12201143_12203088
ES.4328.4	chr11	-	5615	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_9	141.024358968531	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415023	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.40	chr11	-	5757	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	162.009133025498	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414958	12186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12242962_12243277_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.42	chr11	-	5298	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.021798279042	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414748	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12193457_12193515_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.44	chr11	-	4431	8	NIC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	19	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	175.236749477234	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414938	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12414681
ES.4328.45	chr11	-	5681	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-296	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	132.038105198802	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12415256	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681_12414935_12414993
ES.4328.48	chr11	-	2930	4	NNC	ENSMUSG00000020173.18	novel	4488	12	NA	NA	115375	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	225.621118002923	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12204265	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201131_12203088
ES.4328.49	chr11	-	5362	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	151.138989287478	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414881	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293755_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.5	chr11	-	5620	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-349	0	-248	0	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12415208	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.53	chr11	-	5326	13	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.214090971635	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414916	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203075_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293755_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.55	chr11	-	5716	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	137.591843167109	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414944	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414564
ES.4328.56	chr11	-	5349	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	131.39007588405	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414952	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12203247_12203333_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.59	chr11	-	3975	1	NIC	ENSMUSG00000020173.18	novel	2566	8	NA	NA	128987	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	805	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12190653	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12186700_12190700
ES.4328.60	chr11	-	7555	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	3	-1	intron_retention	FALSE	canonical	3	223	junction_6	91.9187317930239	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414954	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.63	chr11	-	5684	16	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	164.081063976181	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414958	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12344838_12344910_12414681
ES.4328.64	chr11	-	5454	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	101	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	150.87905684991	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414651	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
ES.4328.65	chr11	-	5311	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	64	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	133.536733416681	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414688	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
ES.4328.66	chr11	-	7431	13	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-41	-1	intron_retention	FALSE	canonical	3	235	junction_5	77.3912767837708	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12415001	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.67	chr11	-	5630	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	150.455787118844	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCGTGTGGACTTCA	NA	False	NA	-4	True	AATAAA	-17	NA	12414978	12186678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293755_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.68	chr11	-	5814	16	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	164.516044472534	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTCGTGTGGACTTC	NA	False	NA	-5	True	AATAAA	-16	NA	12415004	12186679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12346207_12346364_12414681
ES.4328.69	chr11	-	5333	13	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	158.310415007984	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTCGTGTGGACTTC	NA	False	NA	-5	True	AATAAA	-16	NA	12414937	12186679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293755_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.7	chr11	-	5401	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	157.86478372591	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414679	12186675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
ES.4328.70	chr11	-	5589	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-8	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	165.961776395921	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTCGTGTGGACTTC	NA	False	NA	-5	True	AATAAA	-16	NA	12414968	12186679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12398350_12398489_12414681
ES.4328.72	chr11	-	5603	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	173.806307863268	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACTGTCGTGTGGACTT	NA	False	NA	-6	True	AATAAA	-15	NA	12414944	12186680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206249_12216868_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328144_12328360_12336562_12336767_12414681
ES.4328.75	chr11	-	5486	16	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	37	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	133.940218837443	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACTGTCGTGTGGACTT	NA	False	NA	-6	True	AATAAA	-15	NA	12414920	12186680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12203247_12203333_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.77	chr11	-	5264	14	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	155.407957119623	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAACTGTCGTGTGGAC	NA	False	NA	-8	True	AATAAA	-13	NA	12414946	12186682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12203247_12203333_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.78	chr11	-	5066	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	20	185	20	-183	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12414839	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.80	chr11	-	5350	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	8	183	5	-183	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12414952	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.81	chr11	-	5497	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-55	-183	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	116.000901650261	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12415015	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.82	chr11	-	5330	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	9	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	176.474675873027	832	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12414948	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12344838_12344910_12414681
ES.4328.83	chr11	-	5431	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-1	185	-1	-183	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12414958	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.84	chr11	-	5249	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	19	-183	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATCCTTTTACTATTTC	NA	False	NA	NA	False	TATAAA	-25	NA	12414938	12186860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.85	chr11	-	5207	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	19	-216	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATAAAATCTCTGCCTT	NA	False	NA	NA	False	AATATA	-17	NA	12414938	12186893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.86	chr11	-	5220	14	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	19	125	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_9	141.024358968531	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAAGTTTTGTGATTTT	NA	False	NA	NA	False	TTTAAA	-14	NA	12414938	12186985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.87	chr11	-	5339	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-37	313	-34	122	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGGAAGTTTTGTGAT	NA	False	NA	NA	False	TTTAAA	-11	NA	12414994	12186988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.88	chr11	-	4989	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	241	311	33	122	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGGAAGTTTTGTGAT	NA	False	NA	NA	False	TTTAAA	-11	NA	12414719	12186988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.89	chr11	-	4048	13	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	12	-660	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	131.814263264641	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGCCCAGCACTCACA	NA	False	NA	NA	False	AATAAA	-35	NA	12414945	12187770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.90	chr11	-	6370	13	NIC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	19	-662	intron_retention	FALSE	canonical	3	119	junction_8	125.340508438236	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGCCCAGCACTCA	NA	False	NA	NA	False	AATAAA	-33	NA	12414938	12187772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.91	chr11	-	4322	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	-148	1097	-47	-662	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGCCCAGCACTCA	NA	False	NA	NA	False	AATAAA	-33	NA	12415007	12187772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.92	chr11	-	4575	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	-59	1099	-56	-664	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTGGAGCCCAGCACT	NA	False	NA	NA	False	AATAAA	-31	NA	12415016	12187774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.93	chr11	-	4452	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	-8	1097	-8	-664	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTGGAGCCCAGCACT	NA	False	NA	NA	False	AATAAA	-31	NA	12414968	12187774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.94	chr11	-	4335	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	19	-664	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTGGAGCCCAGCACT	NA	False	NA	NA	False	AATAAA	-31	NA	12414938	12187774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.95	chr11	-	4378	14	NIC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	-30	-664	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCTGGAGCCCAGCACT	NA	False	NA	NA	False	AATAAA	-31	NA	12414990	12187774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.96	chr11	-	4476	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	48	-665	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	116.000901650261	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGCTGGAGCCCAGCAC	NA	False	NA	NA	False	AATAAA	-30	NA	12414909	12187775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ES.4328.97	chr11	-	4107	13	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	18	-669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	168.779112715078	827	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACAGGCTGGAGCCCA	NA	False	NA	NA	False	AATAAA	-26	NA	12414939	12187779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_12188060_12199649_12199914_12201026_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12336562_12336767_12414681
ES.4329.1	chr11	+	515	4	Intergenic	novelGene_3323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAATATATATTT	NA	False	NA	NA	False	AATAAA	-13	NA	12434550	12466950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_12434719_12435327_12435379_12436789_12436868_12466732
ES.433.1	chr1	+	179	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGGAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	51777777	51777956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_51777800_51778000
ES.4330.1	chr11	-	162	1	Intergenic	novelGene_3324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGGTATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	12450909	12450747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_12450700_12450900
ES.4331.1	chr11	-	7622	5	Intergenic	novelGene_3325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAATTTGTCTTAGCTC	NA	False	NA	NA	False	NA	NA	NA	13928375	13872307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_13879406_13904660_13904887_13905656_13905761_13912193_13912300_13928287
ES.4331.2	chr11	-	756	4	Intergenic	novelGene_3326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATCTAAATTTAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	13928367	13904420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_13904887_13905656_13905761_13912193_13912300_13928287
ES.4332.1	chr11	+	184	1	Intergenic	novelGene_3327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAAGTTTCTGG	NA	False	NA	NA	False	NA	NA	NA	14067171	14067355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_14067200_14067400
ES.4333.1	chr11	-	202	1	Intergenic	novelGene_3328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGTTATTACAAATGAA	NA	False	NA	NA	False	NA	NA	NA	15255426	15255224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_15255200_15255400
ES.4334.1	chr11	-	180	1	Intergenic	novelGene_3329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAAAGAACTGAAAC	NA	False	NA	NA	False	NA	NA	NA	15615308	15615128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_15615100_15615300
ES.4335.1	chr11	+	1178	4	ISM	ENSMUSG00000048834.17	ENSMUST00000208926.2	1039	5	-299	18872	-39	-18668	5prime_fragment	FALSE	canonical	2	5	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCATGTTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	16207763	16213550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913
ES.4335.2	chr11	+	1356	5	NNC	ENSMUSG00000048834.17	novel	3264	5	NA	NA	-39	-18665	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1.78535710713571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCATGTTCATTTTCTC	NA	False	NA	NA	False	AATAAA	-24	NA	16207763	16213553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_16208087_16208510_16208686_16209854_16210022_16211437_16211489_16212913
ES.4335.3	chr11	+	3029	5	FSM	ENSMUSG00000048834.17	ENSMUST00000208926.2	1039	5	-293	-1697	-33	-67	multi-exon	FALSE	canonical	1	1	junction_4	2.27760839478607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTGGAAGAATGCTCA	NA	False	NA	NA	False	AATAAA	-12	NA	16207769	16234119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231962
ES.4336.1	chr11	-	569	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	289	-104	-29	104	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGATGCTTTTCTGC	NA	False	NA	66	True	NA	NA	NA	16458195	16451533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
ES.4336.12	chr11	-	3737	1	NIC	ENSMUSG00000078974.11	novel	1862	4	NA	NA	10	1672	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCTTCTTCTAAGCATC	NA	False	NA	NA	False	NA	NA	NA	16458156	16454419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16454400_16458200
ES.4336.3	chr11	-	478	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	277	-1	-41	1	multi-exon	FALSE	canonical	3	4864	junction_3	651.205207459386	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATCAAATTTTAGTAAA	NA	False	NA	-37	True	AATAAA	-20	NA	16458207	16451636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
ES.4336.5	chr11	-	4857	3	NNC	ENSMUSG00000078974.11	novel	1862	4	NA	NA	2	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	2432	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTATCAAATTTTAGTA	NA	False	NA	-39	True	AATAAA	-18	NA	16458164	16451638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_16453710_16453747_16456473_16458103
ES.4336.6	chr11	-	3344	3	NIC	ENSMUSG00000078974.11	novel	1862	4	NA	NA	2	-5	intron_retention	FALSE	canonical	3	4864	junction_2	750.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTTTCCATAACAGACA	NA	False	NA	-56	True	AATAAA	-1	NA	16458164	16451655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16454839_16456372_16456473_16458103
ES.4336.7	chr11	-	4967	2	NIC	ENSMUSG00000078974.11	novel	450	4	NA	NA	10	-5	intron_retention	FALSE	canonical	3	6365	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTTTCCATAACAGACA	NA	False	NA	-56	True	AATAAA	-1	NA	16458156	16451655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16454839_16456372
ES.4336.8	chr11	-	425	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	328	26	10	-13	multi-exon	FALSE	canonical	3	96	junction_3	2890.84082347449	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAACACTTTTTCCAT	NA	False	NA	-64	True	ATTAAA	-9	NA	16458156	16451663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ES.4337.1	chr11	-	169	1	Intergenic	novelGene_3330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16487864	16487695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_16487700_16487900
ES.4338.1	chr11	+	214	1	Intergenic	novelGene_3331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGTATAAATACATAT	NA	False	NA	NA	False	AAAACA	-5	NA	16607729	16607943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_16607700_16607900
ES.4339.1	chr11	+	176	1	Intergenic	novelGene_3332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16699756	16699932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_16699800_16699900
ES.434.1	chr1	-	6615	1	Genic_Genomic	ENSMUSG00000101741.2	novel	NA	NA	NA	NA	-126	-43330	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAAGCTGACCTCAGAC	NA	False	NA	NA	False	AATAAA	-16	NA	51786228	51779613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_51779600_51786200
ES.4340.1	chr11	+	5950	28	FSM	ENSMUSG00000020122.17	ENSMUST00000020329.13	10208	28	7	4251	7	3098	multi-exon	FALSE	canonical	0	0	junction_1	2.52884592816468	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCTTTTCTTCTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	16702217	16863907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_16702571_16808895_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837186_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860256_16860793_16860897_16861493
ES.4340.2	chr11	+	1672	9	ISM	ENSMUSG00000020122.17	ENSMUST00000102884.10	2943	16	118593	282	-7354	-282	3prime_fragment	FALSE	canonical	1	2	junction_2	1.89983551919633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTACTATTGATTGA	5390	False	NA	NA	False	AATAAA	-26	NA	16820795	16837641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140
ES.4341.1	chr11	-	1031	4	FSM	ENSMUSG00000087060.8	ENSMUST00000123734.8	787	4	-79	-165	-3	2	multi-exon	FALSE	canonical	3	11	junction_1	8.25967446224258	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGGTGTATCGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	16901121	16885156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_16885927_16886454_16886565_16900881_16900931_16901019
ES.4341.2	chr11	-	3262	4	NNC	ENSMUSG00000087060.8	novel	600	6	NA	NA	-6	2	intron_retention	TRUE	canonical	0	0	junction_2	12.3558353285671	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGGTGTATCGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	16901106	16885156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_16886565_16887372_16889091_16900881_16900931_16901019
ES.4341.3	chr11	-	2159	1	NIC	ENSMUSG00000087060.8	novel	1540	3	NA	NA	13727	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGGTGTATCGTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	16887315	16885156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16885200_16887300
ES.4341.4	chr11	-	1501	2	NIC	ENSMUSG00000087060.8	novel	941	4	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGAAGGTGTATCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16901097	16885158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16886565_16901002
ES.4341.5	chr11	-	1623	2	ISM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	1	5	1	0	intron_retention	FALSE	canonical	3	28	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGAAGGTGTATCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	16901098	16885158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_16886565_16900881
ES.4341.6	chr11	-	532	4	NIC	ENSMUSG00000087060.8	novel	747	5	NA	NA	-8	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.18993502999218	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATTTTGTCTTTGGT	NA	False	NA	NA	False	CATAAA	-36	NA	16901108	16885620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_16885842_16886454_16886565_16887372_16887485_16901019
ES.4341.7	chr11	-	498	4	FSM	ENSMUSG00000087060.8	ENSMUST00000139493.8	941	4	-27	470	-27	0	multi-exon	FALSE	canonical	3	10	junction_1	8.73053390247253	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAGAAGAATATTTTG	NA	False	NA	NA	False	CATAAA	-28	NA	16901145	16885628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_16885842_16886454_16886565_16900881_16900931_16901019
ES.4342.1	chr11	+	1525	4	NNC	ENSMUSG00000044966.5	novel	2117	4	NA	NA	20	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTCCACTGCAGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	16901429	16904780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_16901885_16903141_16903254_16903348_16903682_16904155
ES.4343.1	chr11	+	2732	1	Intergenic	novelGene_3333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATCATGTATTTCTT	432	False	NA	-4	True	AATAAA	-10	NA	16905777	16908509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_16905800_16908500
ES.4344.1	chr11	+	2978	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	-112	-7	-112	7	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCAGCTTTGAT	NA	False	NA	18	True	AATAAA	-22	NA	17109150	17150382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ES.4344.10	chr11	+	3849	5	NIC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	96	3	intron_retention	FALSE	canonical	3	579	junction_4	31.2119768678628	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTATTGTGTCAGCTT	NA	False	NA	14	True	AATAAA	-18	NA	17109358	17150378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17109543_17132106_17132147_17142956_17144277_17144668_17144854_17148258
ES.4344.11	chr11	+	3351	1	Genic_Genomic	ENSMUSG00000033953.11	novel	NA	NA	NA	NA	2024	-2157	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGAACGTGATTTACTT	NA	False	NA	NA	False	NA	NA	NA	17144867	17148218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_17144900_17148200
ES.4344.2	chr11	+	2699	6	NNC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	53	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.921834404115	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTGTGTCAGC	NA	False	NA	12	True	AATAAA	-16	NA	17109315	17150376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144746_17148258
ES.4344.3	chr11	+	2785	6	NNC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	259.921834404115	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109315	17150375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144833_17148258
ES.4344.4	chr11	+	2769	5	NIC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	55	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	276.552888251054	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTGTGTCAGCTTTG	NA	False	NA	16	True	AATAAA	-20	NA	17109317	17150380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17109543_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ES.4344.5	chr11	+	2170	2	NNC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109317	17150375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17109417_17148304
ES.4344.7	chr11	+	6202	5	ISM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	62	0	62	0	intron_retention	FALSE	canonical	3	586	junction_1	55.71523579776	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109324	17150375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668
ES.4344.8	chr11	+	2796	6	NNC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	63	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.921834404115	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTATTGTGTCAGCTT	NA	False	NA	14	True	AATAAA	-18	NA	17109325	17150378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144858_17148265
ES.4344.9	chr11	+	1935	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	63	861	63	-861	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAACTAGTGATGGATG	NA	False	NA	NA	False	NA	NA	NA	17109325	17149514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ES.4345.1	chr11	-	8044	3	NIC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1460	junction_1	75	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	48	True	AGTAAA	-19	NA	17161584	17153197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_17158907_17159076_17159138_17159310
ES.4345.10	chr11	-	1394	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	-15	165	-15	-165	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTACTAGTGTCTGTG	NA	False	NA	-22	True	AGTAAA	-43	NA	17161583	17153362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.11	chr11	-	1630	8	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	-31	-229	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	685.118491166875	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATGTGCAGTAAAAGTA	NA	False	NA	-2	True	AATAAA	-37	NA	17161599	17153426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158380_17158665_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.12	chr11	-	1646	7	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	52	-254	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	566.302530062824	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATTAAAGATGTTAAA	NA	False	NA	-27	True	AATAAA	-12	NA	17161516	17153451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158380_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.13	chr11	-	1155	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	-13	402	-13	-402	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTGGTGCCAGGCACT	NA	False	NA	NA	False	ATTAAA	-11	NA	17161581	17153599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.2	chr11	-	1572	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	-31	3	-31	-3	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCAGTCTCTTTTTC	NA	False	NA	45	True	AGTAAA	-16	NA	17161599	17153200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.4	chr11	-	1770	8	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	54	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	685.118491166875	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCAGTCTCTTTTT	NA	False	NA	44	True	AGTAAA	-15	NA	17161514	17153201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158380_17158665_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.5	chr11	-	1341	7	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	-256	-4	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_6	554.276004251392	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCAGTCTCTTTTT	NA	False	NA	44	True	AGTAAA	-15	NA	17161310	17153201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161253
ES.4345.6	chr11	-	1961	7	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	566.302530062824	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCAGTCTCTTTTT	NA	False	NA	44	True	AGTAAA	-15	NA	17161581	17153201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158380_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ES.4345.8	chr11	-	3127	6	NIC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	6	-4	intron_retention	FALSE	canonical	3	1456	junction_2	68.2524724826874	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAGCAGTCTCTTTTT	NA	False	NA	44	True	AGTAAA	-15	NA	17161562	17153201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17161138_17161312
ES.4345.9	chr11	-	1180	7	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	-256	-165	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_6	554.276004251392	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTACTAGTGTCTGTG	NA	False	NA	-22	True	AGTAAA	-43	NA	17161310	17153362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161253
ES.4346.1	chr11	+	1920	7	NIC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	94.008421608563	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	2422	False	NA	8	True	AATAAA	-10	NA	17161868	17183796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17162147_17169013_17169115_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ES.4346.2	chr11	+	2054	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-49	-3	-49	3	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGAGGCGTTGATTC	2422	False	NA	11	True	AATAAA	-13	NA	17161868	17183799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ES.4346.3	chr11	+	4881	7	ISM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-34	-5	-34	5	intron_retention	FALSE	canonical	3	217	junction_1	23.5206764830908	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGGCGTTGATTCTT	2437	False	NA	13	True	AATAAA	-15	NA	17161883	17183801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768
ES.4346.4	chr11	+	1671	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	-19	350	-19	-350	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATGTAAAGCCAA	2452	False	NA	NA	False	ATTAAA	-20	NA	17161898	17183446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ES.4346.5	chr11	+	2865	7	NIC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	217	junction_1	20.3606374054339	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	2472	False	NA	8	True	AATAAA	-10	NA	17161918	17183796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17178276_17179768_17179867_17182706
ES.4346.6	chr11	+	3043	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	1	-1042	1	1042	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	2472	False	NA	NA	False	NA	NA	NA	17161918	17184838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ES.4346.7	chr11	+	1767	6	NIC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	106.956813714695	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATATTTGGAGGCGTTG	2473	False	NA	7	True	AATAAA	-9	NA	17161919	17183795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17162147_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ES.4346.8	chr11	+	6247	6	NNC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	5	-329	intron_retention	FALSE	canonical	0	0	junction_5	100.074772045706	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGTTGTTATTTAAG	2476	False	NA	NA	False	ATTAAA	-41	NA	17161922	17183467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17182089_17182706
ES.4346.9	chr11	+	2712	9	NNC	ENSMUSG00000078970.6	novel	2002	8	NA	NA	155	1410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	86.7323469070219	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTCCTACTTCTT	2626	False	NA	NA	False	NA	NA	NA	17162072	17185206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706_17184380_17184924
ES.4347.1	chr11	-	1913	1	Intergenic	novelGene_3334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAAGTATGCAA	NA	False	NA	NA	False	NA	NA	NA	17177042	17175129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_17175100_17177000
ES.4348.1	chr11	+	175	1	Intergenic	novelGene_3335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	17188804	17188979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_17188800_17189000
ES.4349.1	chr11	+	1076	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-41	1946	-26	606	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGGTTGTATGTCCT	7290	False	NA	22	True	AATAAA	-23	NA	17207552	17217230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.2	chr11	+	2026	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-25	980	-10	-980	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGAGTTTGAAATAAT	7306	False	NA	NA	False	AATAAA	-24	NA	17207568	17218196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.3	chr11	+	894	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-21	2108	-6	444	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCTGTTTTCTGTTCAG	7310	False	NA	NA	False	AATACA	-14	NA	17207572	17217068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.4	chr11	+	2482	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	6	493	6	-493	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGATGGGTTTTTAAG	7337	False	NA	NA	False	AATAAA	-17	NA	17207599	17218683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.5	chr11	+	1333	5	FSM	ENSMUSG00000000581.9	ENSMUST00000156784.2	684	5	-43	-606	-43	606	multi-exon	TRUE	canonical	2	9	junction_1	280.161895160637	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGGTTGTATGTCCT	7382	False	NA	22	True	AATAAA	-23	NA	17207644	17217230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17208008_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.6	chr11	+	5965	4	NIC	ENSMUSG00000000581.9	novel	2981	5	NA	NA	-31	610	intron_retention	FALSE	canonical	3	609	junction_2	43.977266854592	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTTGTATGTCCTGACT	7394	False	NA	26	True	AATAAA	-27	NA	17207656	17217234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17212795_17213608_17213676_17213950_17214007_17216530
ES.4349.7	chr11	+	780	1	NIC	ENSMUSG00000000581.9	novel	2981	5	NA	NA	2830	606	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGGTTGTATGTCCT	4512	False	NA	22	True	AATAAA	-23	NA	17216450	17217230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17216400_17217200
ES.4349.8	chr11	+	1667	1	NIC	ENSMUSG00000000581.9	novel	2981	5	NA	NA	2909	-980	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGAGTTTGAAATAAT	4591	False	NA	NA	False	AATAAA	-24	NA	17216529	17218196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_17216500_17218200
ES.435.1	chr1	+	3378	1	Antisense	novelGene_ENSMUSG00000018417.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51834960	51838338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_51835000_51838300
ES.435.2	chr1	+	3002	1	Antisense	novelGene_ENSMUSG00000018417.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTTTGAGCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	51838271	51841273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_51838300_51841300
ES.4350.1	chr11	-	5570	1	Intergenic	novelGene_3336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGGGATCGGCGGCTT	NA	False	NA	NA	False	NA	NA	NA	17883570	17878000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_17878000_17883600
ES.4351.1	chr11	+	209	1	Intergenic	novelGene_3337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCCGGCAGAATAGCT	NA	False	NA	NA	False	NA	NA	NA	17899565	17899774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_17899600_17899800
ES.4352.1	chr11	+	919	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	-531	0	-497	0	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAAGGGCTATGCT	NA	False	NA	NA	False	NA	NA	NA	17903472	17905098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17904086_17904792
ES.4352.2	chr11	+	249	2	FSM	ENSMUSG00000086468.2	ENSMUST00000148496.2	388	2	1	138	1	-138	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATTGTGCTTTAATAGA	NA	False	NA	NA	False	AATAAA	-14	NA	17904004	17904960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_17904086_17904792
ES.4353.1	chr11	-	4333	7	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	-6	233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7150836735541	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTCTAAGTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	17903881	17888522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17889093_17889183_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.10	chr11	-	2939	7	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	-6	-1135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	65.7150836735541	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTTTTTTGTGTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	17903881	17889890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562_17903626_17903742
ES.4353.12	chr11	-	3041	6	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	1	-1137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.8953503460709	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTTTTTTGTGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	17903874	17889892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17890351_17895606_17897568_17897774_17897882_17902251_17902329_17902577_17902704_17903562
ES.4353.14	chr11	-	3909	5	ISM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-7	1142	-7	-1142	intron_retention	FALSE	canonical	3	153	junction_2	14.3069039278245	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAACTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	17903882	17889897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577
ES.4353.16	chr11	-	5464	1	NIC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	8514	-1142	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAACTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	17895361	17889897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_17889900_17895400
ES.4353.17	chr11	-	2874	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-6	1317	-6	-1317	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCAGAGATGTATGTG	NA	False	NA	NA	False	AATAAA	-26	NA	17903881	17890072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.18	chr11	-	2544	6	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	535	-1320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.6519364706914	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTTCAGAGATGTAT	NA	False	NA	NA	False	AATAAA	-23	NA	17903340	17890075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902649_17903293
ES.4353.19	chr11	-	6698	5	ISM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	2	2741	2	-2741	5prime_fragment	FALSE	canonical	3	153	junction_1	15.7876534038469	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGGTAGATGTATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	17903873	17891496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.2	chr11	-	4096	7	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	65.7150836735541	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTGAAGAGACTAGATTC	NA	False	NA	NA	False	AATAAA	-22	NA	17903873	17888751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17889093_17889183_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.20	chr11	-	3698	5	ISM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-15	5758	-15	-5758	5prime_fragment	FALSE	canonical	3	153	junction_1	15.7876534038469	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCACCTTGAATCCTTC	NA	False	NA	NA	False	NA	NA	NA	17903890	17894513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.5	chr11	-	4183	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	2	0	2	0	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAGTGAAGAGACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	17903873	17888755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.6	chr11	-	11038	6	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	4	-882	intron_retention	TRUE	non_canonical	0	0	junction_2	74.946380833233	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTATTATGTAAGTAATA	NA	False	NA	NA	False	AAAAAG	-10	NA	17903871	17889637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17897568_17897774_17899550_17899772_17899846_17901498_17902329_17902582_17902704_17903562
ES.4353.7	chr11	-	3314	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-11	882	-11	-882	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTATTATGTAAGTAATA	NA	False	NA	NA	False	AAAAAG	-10	NA	17903886	17889637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.8	chr11	-	3070	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	-17	1132	-17	-1132	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTGTGTCATTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	17903892	17889887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4353.9	chr11	-	3039	6	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	7	-1133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.6465361665604	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTGTGTCATTA	NA	False	NA	NA	False	ATTAAA	-20	NA	17903868	17889888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_17890345_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ES.4354.1	chr11	-	227	1	Intergenic	novelGene_3338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGCAAGTGACAAACAGTA	9844	False	NA	NA	False	AGTAAA	-18	NA	17944035	17943808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_17943800_17944000
ES.4355.1	chr11	-	3214	13	FSM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	-28	10	-1	3	multi-exon	FALSE	canonical	0	0	junction_7	0.897527467855751	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGATGAACTGTATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	18968986	18830671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ES.4355.2	chr11	-	3044	12	NIC	ENSMUSG00000020160.19	novel	3196	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	0.935966376453364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGATGAACTGTATT	NA	False	NA	NA	False	AATAAA	-17	NA	18968966	18830674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ES.4356.1	chr11	-	168	1	Intergenic	novelGene_3339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAGGGTGTGGTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	18970432	18970264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_18970300_18970400
ES.4357.1	chr11	+	180	1	Intergenic	novelGene_3340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGGGTAAGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	19654412	19654592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_19654400_19654600
ES.4358.1	chr11	-	289	1	Intergenic	novelGene_3341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAACAAACAAAATCA	NA	False	NA	NA	False	NA	NA	NA	19755003	19754714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19754700_19755000
ES.4358.2	chr11	-	174	1	Intergenic	novelGene_3342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGGGTGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	19755002	19754828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19754800_19755000
ES.4359.1	chr11	-	5198	1	Intergenic	novelGene_3343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	19792602	19787404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19787400_19792600
ES.436.1	chr1	+	3131	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGAATCTCA	NA	False	NA	NA	False	GATAAA	-45	NA	51855984	51859115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_51856000_51859100
ES.4360.1	chr11	-	998	2	Intergenic	novelGene_3344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	19799904	19797464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19798192_19799633
ES.4361.1	chr11	+	157	1	Intergenic	novelGene_3345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	19852174	19852331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_19852200_19852300
ES.4362.1	chr11	+	171	1	Intergenic	novelGene_3346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTGTTTTTCGAGAC	NA	False	NA	NA	False	NA	NA	NA	19859740	19859911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_19859700_19859900
ES.4363.1	chr11	+	4057	8	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-14215	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	33.0182386209903	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTTTGGGGTATTTG	NA	False	NA	4	True	TATAAA	-16	NA	19860159	19974027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19860216_19860423_19860585_19864937_19864991_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.10	chr11	+	4498	7	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.7040962382856	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19874418	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19874957_19895128_19895304_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.11	chr11	+	2946	5	ISM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-7	2514	-7	1930	5prime_fragment	FALSE	canonical	3	51	junction_2	9.97496867163	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGGCATTCGGTTCA	NA	False	NA	NA	False	AAAAAG	-10	NA	19874434	19970063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051
ES.4363.12	chr11	+	3854	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	987	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3452006758042	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19875428	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19875498_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.13	chr11	+	3984	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-9473	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3452006758042	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19895096	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19895296_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.14	chr11	+	4003	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	24915	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3452006758042	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	3513	False	NA	2	True	TATAAA	-14	NA	19929484	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19929703_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.15	chr11	+	3889	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	28571	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.0647162361755	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	7169	False	NA	2	True	TATAAA	-14	NA	19933140	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19933245_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.16	chr11	+	2093	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	28604	36521	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	31.4108261591446	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTGAGTCTTGTTTTT	7202	False	NA	NA	False	NA	NA	NA	19933173	20010547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19933245_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_20009075
ES.4363.17	chr11	+	155	1	Intergenic	novelGene_3352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAATAAATGT	NA	False	NA	NA	False	NA	NA	NA	19947261	19947416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_19947300_19947400
ES.4363.18	chr11	+	165	1	Intergenic	novelGene_3354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAGGAAGGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	19964901	19965066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_19964900_19965100
ES.4363.19	chr11	+	4423	2	Antisense	novelGene_ENSMUSG00000020152.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAGCCATTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	20008790	20013296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20011536_20011618
ES.4363.2	chr11	+	4676	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-374	-1450	-307	1	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGCTTTGGGGTATTTG	NA	False	NA	4	True	TATAAA	-16	NA	19874067	19974027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.3	chr11	+	4711	7	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-288	5824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.0027776234739	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTTGTGAATTTGGC	NA	False	NA	NA	False	NA	NA	NA	19874086	19979850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790_19974023_19979791
ES.4363.4	chr11	+	4312	7	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-239	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.0027776234739	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTATTGGCTTTGGGGTA	NA	False	NA	0	True	TATAAA	-12	NA	19874135	19974023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790_19972634_19972925
ES.4363.5	chr11	+	4266	7	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	-196	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.0027776234739	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGCTTTGGGGTATT	NA	False	NA	2	True	TATAAA	-14	NA	19874178	19974025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790_19972627_19972923
ES.4363.6	chr11	+	3108	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	-256	0	-189	0	multi-exon	FALSE	canonical	3	51	junction_2	8.95767827062348	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAAAACCCTC	NA	False	NA	NA	False	AAAACA	-12	NA	19874185	19972577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ES.4363.8	chr11	+	4293	6	NNC	ENSMUSG00000045671.18	novel	2852	6	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.7327514483639	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATTGGCTTTGGGGTAT	NA	False	NA	1	True	TATAAA	-13	NA	19874361	19974024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968128_19970814
ES.4364.1	chr11	+	172	1	Intergenic	novelGene_3356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGAATGCTA	209	False	NA	NA	False	NA	NA	NA	20022032	20022204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20022000_20022200
ES.4365.1	chr11	+	3733	1	Antisense	novelGene_ENSMUSG00000020152.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAACAGTATCAGAAAAC	8645	False	NA	NA	False	NA	NA	NA	20047721	20051454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20047700_20051500
ES.4366.1	chr11	+	178	1	Intergenic	novelGene_3363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	20087458	20087636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20087500_20087600
ES.4367.1	chr11	+	1003	2	Genic_Genomic	ENSMUSG00000081346.2	novel	223	1	NA	NA	-1996	154	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCGGGCGCGGTGGTGC	NA	False	NA	NA	False	ATTAAA	-7	NA	20090571	20092944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_20091147_20092516
ES.4368.1	chr11	+	180	1	Antisense	novelGene_ENSMUSG00000085035.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	20095969	20096149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20096000_20096100
ES.4369.1	chr11	+	177	1	Intergenic	novelGene_3366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAGTGACAG	NA	False	NA	NA	False	NA	NA	NA	20099111	20099288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20099100_20099300
ES.437.1	chr1	+	5852	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGCTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	51891423	51897275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_51891400_51897300
ES.4370.1	chr11	+	178	1	Intergenic	novelGene_3367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGCCCTTCCCT	1537	False	NA	NA	False	NA	NA	NA	20114613	20114791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20114600_20114800
ES.4371.1	chr11	+	2750	7	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	-14440	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	965.212138455698	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20136991	20176856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20137041_20142099_20142195_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.10	chr11	+	2733	5	NIC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	3	65	junction_2	830.517007652462	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCGCTTGTTGGGTCTA	NA	False	NA	NA	False	AATAAA	-23	NA	20151428	20176855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
ES.4371.11	chr11	+	2804	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	821.738011777476	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCGCTTGTTGGGTCTA	NA	False	NA	NA	False	AATAAA	-23	NA	20151432	20176855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20151632_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.12	chr11	+	2967	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	2	-142	-1	142	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTCTATCATAACTAA	NA	False	NA	NA	False	TATAAA	-20	NA	20151433	20176998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.13	chr11	+	1459	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	790.203872427869	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTATGGTGATAAGTA	NA	False	NA	13	True	AATAAA	-26	NA	20151439	20175461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20151653_20165629_20165703_20168812_20168909_20173048_20173180_20174366_20174499_20174647
ES.4371.14	chr11	+	5395	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	8954	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	821.738011777476	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20160562	20175464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20164744_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.15	chr11	+	6887	2	NNC	ENSMUSG00000020149.18	novel	2657	6	NA	NA	22661	5242	intron_retention	FALSE	non_canonical	0	0	junction_1	0	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCAGCCTATATTTC	NA	False	NA	NA	False	NA	NA	NA	20174269	20182098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20179481_20180422
ES.4371.16	chr11	+	2161	1	Antisense	novelGene_ENSMUSG00000044066.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAGCCTATATTTCT	NA	False	NA	NA	False	NA	NA	NA	20179938	20182099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20179900_20182100
ES.4371.3	chr11	+	1228	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-183	1782	-183	-390	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTGTGTAATCCT	NA	False	NA	NA	False	TTTAAA	-20	NA	20151248	20175074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.4	chr11	+	3008	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-179	-2	-179	2	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTGTTGGGTCTATTC	NA	False	NA	NA	False	AATAAA	-26	NA	20151252	20176858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.5	chr11	+	2580	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-165	412	-165	-406	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGCATGTGTGAAAG	NA	False	NA	NA	False	AATATA	-13	NA	20151266	20176444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.6	chr11	+	1654	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-157	1330	-157	62	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGCCACGTGTGTG	NA	False	NA	78	True	ATTAAA	-23	NA	20151274	20175526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.7	chr11	+	2799	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-130	158	-130	-152	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTTTATTTTTCACT	NA	False	NA	NA	False	ATTAAA	-19	NA	20151301	20176698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ES.4371.8	chr11	+	2891	6	NNC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	-15	59	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	817.061221696392	856	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCAGGAATTGGGTCAA	NA	False	NA	NA	False	TATAAA	-23	NA	20151416	20176915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174657
ES.4371.9	chr11	+	1574	5	ISM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	-4	1406	-4	-14	intron_retention	FALSE	canonical	3	1848	junction_1	134.17246364288	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAATATCAAACTGTAT	NA	False	NA	2	True	AATAAA	-15	NA	20151427	20175450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366
ES.4372.1	chr11	+	5315	3	Antisense	novelGene_ENSMUSG00000044066.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACAGATTTTCTTGAT	NA	False	NA	NA	False	NA	NA	NA	20185340	20192449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20188591_20189197_20190699_20191885
ES.4372.2	chr11	+	2215	1	Antisense	novelGene_ENSMUSG00000044066.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20190195	20192410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20190200_20192400
ES.4372.3	chr11	+	1920	1	Antisense	novelGene_ENSMUSG00000044066.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAGCAGAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	20190790	20192710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20190800_20192700
ES.4373.1	chr11	-	5820	1	Intergenic	novelGene_3347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGCGAATACAGCCA	NA	False	NA	NA	False	NA	NA	NA	19881762	19875942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19875900_19881800
ES.4374.1	chr11	-	177	1	Intergenic	novelGene_3348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	19883786	19883609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19883600_19883800
ES.4375.1	chr11	-	1738	1	Intergenic	novelGene_3349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19898826	19897088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19897100_19898800
ES.4376.1	chr11	-	8262	1	Antisense	novelGene_ENSMUSG00000045671.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTAAGGAGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	19912420	19904158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_19904200_19912400
ES.4376.2	chr11	-	3048	7	Antisense	novelGene_ENSMUSG00000045671.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTAAGGAGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	19971795	19904158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_19905424_19905514_19905737_19948117_19948295_19955775_19955954_19958414_19958476_19968049_19968188_19970788
ES.4376.3	chr11	-	158	1	Intergenic	novelGene_3350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7038	False	NA	NA	False	NA	NA	NA	19918466	19918308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19918300_19918500
ES.4376.4	chr11	-	156	2	Antisense	novelGene_ENSMUSG00000045671.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	19950095	19918308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_19918338_19949968
ES.4376.5	chr11	-	2578	1	Intergenic	novelGene_3351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTTCTGGAGAAAAATC	1101	False	NA	NA	False	NA	NA	NA	19924403	19921825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19921800_19924400
ES.4376.6	chr11	-	243	1	Intergenic	novelGene_3353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCCCCCCGCACCCC	NA	False	NA	NA	False	AATAAA	-29	NA	19954398	19954155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_19954200_19954400
ES.4377.1	chr11	-	234	1	Intergenic	novelGene_3355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	20001864	20001630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20001600_20001900
ES.4378.1	chr11	-	3676	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-44	-1	-44	1	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTTTGTCTTTTTCTT	1292	False	NA	-3	True	AATAAA	-20	NA	20062957	20012302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.10	chr11	-	3592	9	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	270.200128377098	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAATTTGAATTTTGTCT	1362	False	NA	-10	True	AATAAA	-13	NA	20062887	20012309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20014860_20022455_20022589_20027187_20027327_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.11	chr11	-	3472	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-23	182	-23	-182	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAATGCCTTGAGGGTC	1313	False	NA	80	True	ATTAAA	-24	NA	20062936	20012485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.12	chr11	-	3389	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-45	287	-45	-287	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAAATCTGTTTTTT	1291	False	NA	-25	True	AATAAA	-5	NA	20062958	20012590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.13	chr11	-	3419	10	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-20	-300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	333.0224476177	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	1362	False	NA	-38	True	NA	NA	NA	20062887	20012603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20031917_20032032_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.14	chr11	-	3284	8	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-18	-300	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	282.400352662091	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	1364	False	NA	-38	True	NA	NA	NA	20062885	20012603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030820_20044196_20044446_20050822_20050934_20062804
ES.4378.15	chr11	-	5991	8	NIC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-17	-300	intron_retention	FALSE	canonical	3	719	junction_1	62.6323903945124	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	1365	False	NA	-38	True	NA	NA	NA	20062884	20012603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20014860_20022455_20022589_20027187_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.16	chr11	-	2544	5	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	32783	-300	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	328.020102280333	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAATTTAAA	NA	False	NA	-38	True	NA	NA	NA	20030084	20012603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20013295_20013347_20014860_20022455_20022589_20027187_20027334_20030022
ES.4378.17	chr11	-	3146	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-8	493	-8	-493	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAATGTAGAATTTGT	1328	False	NA	-9	True	AATAAA	-26	NA	20062921	20012796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.18	chr11	-	2588	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-11	1054	-11	-1054	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTTCATTTCAAAT	1325	False	NA	NA	False	AATACA	-22	NA	20062924	20013357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.19	chr11	-	1447	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	8	2176	4	-2176	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCTTTGCAGACATT	1344	False	NA	NA	False	NA	NA	NA	20062905	20014479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.2	chr11	-	3457	8	NIC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	287.160695963292	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	1364	False	NA	-4	True	AATAAA	-19	NA	20062885	20012303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20014860_20022455_20022589_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.20	chr11	-	1288	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	-23	2366	-23	-2366	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCCTCTAATGCTTTTT	1313	False	NA	-3	True	GATAAA	-19	NA	20062936	20014669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.22	chr11	-	6608	3	NNC	ENSMUSG00000020152.8	novel	2087	6	NA	NA	31893	4707	intron_retention	TRUE	non_canonical	0	0	junction_1	0	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATTAAGTCTTGGGGT	NA	False	NA	NA	False	NA	NA	NA	20030974	20023978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20025204_20025379_20027649_20027860
ES.4378.23	chr11	-	2136	6	FSM	ENSMUSG00000020152.8	ENSMUST00000132022.2	2087	6	-18	-31	-18	31	multi-exon	FALSE	canonical	3	722	junction_1	59.9486446885999	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCCACTTTAAGGGCAC	1364	False	NA	NA	False	NA	NA	NA	20062885	20028654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.24	chr11	-	1071	6	FSM	ENSMUSG00000020152.8	ENSMUST00000132022.2	2087	6	8	1008	8	-1008	multi-exon	FALSE	canonical	3	722	junction_1	59.9486446885999	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGATTCGAGCATCTT	1390	False	NA	NA	False	ATTAAA	-29	NA	20062859	20029693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.25	chr11	-	695	6	FSM	ENSMUSG00000020152.8	ENSMUST00000132022.2	2087	6	-28	1420	14	-1420	multi-exon	FALSE	canonical	3	722	junction_1	59.9486446885999	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTTGTTATGTGGGT	1354	False	NA	NA	False	NA	NA	NA	20062895	20030105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.26	chr11	-	213	1	Intergenic	novelGene_3357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	568	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCACAGTTGTAGTCA	7592	False	NA	NA	False	NA	NA	NA	20056657	20056444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20056400_20056700
ES.4378.27	chr11	-	332	2	Intergenic	novelGene_3358	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAGAGTTTT	4844	False	NA	NA	False	NA	NA	NA	20148931	20056479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20056628_20148747
ES.4378.28	chr11	-	437	2	Intergenic	novelGene_3359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACAACATGTTGTTTTT	1470	False	NA	NA	False	AATAAA	-17	NA	20088172	20087216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20087398_20087916
ES.4378.29	chr11	-	876	3	Intergenic	novelGene_3360	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	33.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACAACATGTTGTTT	266	False	NA	NA	False	AATAAA	-15	NA	20089376	20087218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20087398_20088488_20088566_20088756
ES.4378.30	chr11	-	484	3	Intergenic	novelGene_3361	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	15	junction_2	26	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCATAATCACAACATG	266	False	NA	NA	False	AATAAA	-9	NA	20089376	20087224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20087398_20088488_20088566_20089142
ES.4378.31	chr11	-	746	1	Intergenic	novelGene_3362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGCATAATCACAACAT	1671	False	NA	NA	False	AATAAA	-8	NA	20087971	20087225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20087200_20088000
ES.4378.32	chr11	-	173	1	Intergenic	novelGene_3364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGATTTATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	20097189	20097016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20097000_20097200
ES.4378.33	chr11	-	190	1	Intergenic	novelGene_3365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAAAAAATCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	20097785	20097595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20097600_20097800
ES.4378.34	chr11	-	175	1	Intergenic	novelGene_3368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	4844	False	NA	NA	False	NA	NA	NA	20148931	20148756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20148800_20148900
ES.4378.4	chr11	-	2768	3	NIC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	359.5	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAATTTTGTCTTTTT	1364	False	NA	-6	True	AATAAA	-17	NA	20062885	20012305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20014860_20022455_20022589_20062804
ES.4378.5	chr11	-	3515	8	NIC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-19	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	289.270722715605	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAATTTTGTCTTTTT	1317	False	NA	-6	True	AATAAA	-17	NA	20062932	20012305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20014860_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.6	chr11	-	3592	10	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	256.083078726175	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAATTTTGTCTTTTT	1336	False	NA	-6	True	AATAAA	-17	NA	20062913	20012305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20014246_20014282_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.7	chr11	-	3526	10	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	256.083078726175	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGAATTTTGTCTTTT	1364	False	NA	-7	True	AATAAA	-16	NA	20062885	20012306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20013256_20013329_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ES.4378.8	chr11	-	3619	9	NNC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	269.125174175513	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTTGAATTTTGTCTT	1334	False	NA	-9	True	AATAAA	-14	NA	20062915	20012308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041347_20044217_20044446_20050822_20050934_20062804
ES.4379.1	chr11	-	177	1	Intergenic	novelGene_3369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20158028	20157851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20157900_20158000
ES.438.1	chr1	-	6690	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-25	-1898	-12	1669	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGCTTAAAATGCTCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	51955112	51787254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.10	chr1	-	4807	30	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	64.6063171739975	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955099	51788923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.11	chr1	-	5151	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	83.5937597352019	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955099	51788923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51808041_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863359_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.12	chr1	-	4786	30	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	16867	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_29	64.2462933319624	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTCTCCGAAGTCT	NA	False	NA	9	True	AAAAAG	-20	NA	51918593	51788930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51918484
ES.438.13	chr1	-	5774	18	NIC	ENSMUSG00000018417.15	novel	5052	30	NA	NA	841	-7	intron_retention	FALSE	canonical	3	284	junction_9	28.2826808241736	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATTCTCCGAAGTCT	NA	False	NA	9	True	AAAAAG	-20	NA	51833543	51788930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470
ES.438.16	chr1	-	5027	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-43	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	63.6335079445832	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAAAGTT	NA	False	NA	-16	True	AAAAAG	-34	NA	51955143	51788955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838683_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.2	chr1	-	5468	16	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	179	30	intron_retention	FALSE	canonical	3	284	junction_11	30.0374580963318	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGGATATGATCATTT	NA	False	NA	46	True	GATAAA	-35	NA	51821184	51788893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51817707_51818719_51818921_51821128
ES.438.20	chr1	-	4883	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	4	-120	-3	108	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCACTGATCTTTTTG	NA	False	NA	-93	True	NA	NA	NA	51955083	51789032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.21	chr1	-	4921	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-139	-15	4	3	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACTGTATTTTTGTATC	NA	False	NA	NA	False	AATAAA	-31	NA	51955226	51789137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.22	chr1	-	4737	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	91	224	-39	0	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGGATTACAACTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	51955139	51789147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.23	chr1	-	3766	22	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-2267	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	74.0964622251678	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTGGATTACAACTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51836651	51789148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836268_51836557
ES.438.29	chr1	-	5407	30	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-7	2	intron_retention	FALSE	canonical	3	256	junction_20	29.6938400671088	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCTGGATTACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	51955107	51789150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.3	chr1	-	5134	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-129	-238	14	9	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCGTGTTTATTGGTAC	NA	False	NA	25	True	GATAAA	-14	NA	51955216	51788914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.30	chr1	-	4769	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	60.9409185650787	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTGCTGGATTACAAC	NA	False	NA	NA	False	AATAAA	-17	NA	51955121	51789151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797067_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.31	chr1	-	4520	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-9	256	4	-256	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGAAAGTTTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	51955096	51789408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.32	chr1	-	2935	19	ISM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	122254	505	1551	-505	3prime_fragment	FALSE	canonical	3	284	junction_11	28.1296052471062	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGATAACCAACATT	NA	False	NA	NA	False	CATAAA	-9	NA	51832833	51789657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798
ES.438.33	chr1	-	3878	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-127	1016	16	-1016	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTCATTCCTAAGTCC	NA	False	NA	0	True	ATTAAA	-31	NA	51955214	51790168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.35	chr1	-	3830	30	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-4	-1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	83.4854291757617	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATAGTTCATTCCTAA	NA	False	NA	-4	True	ATTAAA	-27	NA	51955104	51790172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817860_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.36	chr1	-	3763	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	37	1252	37	-1023	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGAATAGTTCATTCC	NA	False	NA	-7	True	ATTAAA	-24	NA	51955193	51790175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.37	chr1	-	3758	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-3	-1023	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.1074338009013	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGAATAGTTCATTCC	NA	False	NA	-7	True	ATTAAA	-24	NA	51955083	51790175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797186_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.38	chr1	-	3675	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-2	-1023	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_14	61.9768774087025	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGAATAGTTCATTCC	NA	False	NA	-7	True	ATTAAA	-24	NA	51955082	51790175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815500_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.39	chr1	-	3690	30	NNC	ENSMUSG00000018417.15	novel	5052	30	NA	NA	-7	-1025	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	79.9379366869061	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCAGAATAGTTCATT	NA	False	NA	-9	True	ATTAAA	-22	NA	51955107	51790177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801635_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.4	chr1	-	5002	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	59	-9	59	9	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCGTGTTTATTGGTAC	NA	False	NA	25	True	GATAAA	-14	NA	51955171	51788914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.40	chr1	-	3821	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-51	-1025	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	62.6013489382528	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATCAGAATAGTTCATT	NA	False	NA	-9	True	ATTAAA	-22	NA	51955151	51790177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801635_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.41	chr1	-	3587	30	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	0	-1029	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	64.7266639229317	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATTATCAGAATAGTT	NA	False	NA	-13	True	ATTAAA	-18	NA	51955080	51790181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51954919
ES.438.42	chr1	-	5825	29	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	63	-1030	intron_retention	FALSE	canonical	3	256	junction_19	31.3349864775943	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTATCAGAATAGT	NA	False	NA	-14	True	ATTAAA	-17	NA	51955167	51790182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.43	chr1	-	3540	30	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	16860	-1031	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_29	64.2462933319624	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTAATTATCAGAATAG	NA	False	NA	-15	True	ATTAAA	-16	NA	51918600	51790183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51918484
ES.438.44	chr1	-	3334	29	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-13	-1031	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	65.9116601124225	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTAATTATCAGAATAG	NA	False	NA	-15	True	ATTAAA	-16	NA	51955113	51790183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.46	chr1	-	3719	30	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	28	-1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	64.2508461012963	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTTTAATTATCAGAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	51955202	51790185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801731_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.47	chr1	-	4190	32	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	0	-1033	combination_of_known_junctions	FALSE	canonical	0	0	junction_31	81.4469688870918	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTTTAATTATCAGAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	51955080	51790185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51950410_51950874_51954919
ES.438.48	chr1	-	5691	30	NIC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-30	-1035	intron_retention	FALSE	canonical	3	256	junction_20	30.8684447276644	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTTTTAATTATCAGA	NA	False	NA	-19	True	ATTAAA	-12	NA	51955130	51790187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.5	chr1	-	4920	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	63.7058256537204	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955080	51788923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815495_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.52	chr1	-	3010	2	ISM	ENSMUSG00000018417.15	ENSMUST00000114541.8	4616	29	149430	3554	6584	-3549	intron_retention	FALSE	canonical	3	379	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGAATGTGGACGTTA	5	True	NA	NA	False	NA	NA	NA	51797045	51792701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51794930_51796263
ES.438.53	chr1	-	2093	1	NIC	ENSMUSG00000018417.15	novel	5052	30	NA	NA	382	2431	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACAAATCTATTGTAT	NA	False	NA	NA	False	NA	NA	NA	51815213	51813120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51813100_51815200
ES.438.54	chr1	-	3208	17	ISM	ENSMUSG00000018417.15	ENSMUST00000114537.9	4618	29	-32	27134	-32	-723	5prime_fragment	FALSE	canonical	3	256	junction_7	27.3540873316951	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACATTAGTTTTGCTTTG	NA	False	NA	NA	False	NA	NA	NA	51955132	51816274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.55	chr1	-	8476	3	ISM	ENSMUSG00000018417.15	ENSMUST00000136701.2	969	8	3305	2440	3305	882	internal_fragment	FALSE	canonical	3	312	junction_1	2.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGACATATACCCATA	NA	False	NA	NA	False	NA	NA	NA	51831079	51817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51818921_51821128_51821192_51823595
ES.438.56	chr1	-	4866	15	NIC	ENSMUSG00000018417.15	novel	4618	29	NA	NA	-3	882	intron_retention	FALSE	canonical	3	256	junction_5	28.9990323554256	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGACATATACCCATA	NA	False	NA	NA	False	NA	NA	NA	51955090	51817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51818921_51821128_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.57	chr1	-	3057	15	NIC	ENSMUSG00000018417.15	novel	4618	29	NA	NA	1	882	intron_retention	FALSE	canonical	3	256	junction_5	28.3080719720632	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGACATATACCCATA	NA	False	NA	NA	False	NA	NA	NA	51955079	51817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51818921_51821128_51821192_51823595_51823701_51832798_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.58	chr1	-	5409	1	NIC	ENSMUSG00000018417.15	novel	5052	30	NA	NA	-2037	882	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGACATATACCCATA	NA	False	NA	NA	False	NA	NA	NA	51823400	51817991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_51818000_51823400
ES.438.59	chr1	-	2464	16	ISM	ENSMUSG00000018417.15	ENSMUST00000114537.9	4618	29	-7	28866	-7	867	5prime_fragment	FALSE	canonical	3	256	junction_6	28.2437013627227	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	51955107	51818006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.60	chr1	-	1548	2	NNC	ENSMUSG00000018417.15	novel	5052	30	NA	NA	-1093	-1301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTTTGGCCAGCATTAG	NA	False	NA	NA	False	AATAAA	-11	NA	51822456	51820174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51820395_51821128
ES.438.7	chr1	-	4547	29	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.9116601124225	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955130	51788923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815500_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.438.9	chr1	-	4968	31	NNC	ENSMUSG00000018417.15	novel	4767	31	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	60.9409185650787	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955092	51788923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_51790456_51794801_51794930_51796263_51796417_51797067_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ES.4380.1	chr11	-	5656	1	Genic_Genomic	ENSMUSG00000044066.15	novel	NA	NA	NA	NA	21820	5129	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAAGGAAAAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	20177563	20171907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_20171900_20177600
ES.4380.10	chr11	-	4885	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	29	-110	-6	110	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTGACTTGAGGAGT	3084	False	NA	NA	False	AATAAA	-15	NA	20199389	20176926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.11	chr11	-	4839	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-36	1	-25	-1	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGGTGTTGTATCATT	3019	False	NA	NA	False	ATTAAA	-22	NA	20199454	20177037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.12	chr11	-	5416	6	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	49	junction_3	32.6778212248002	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTGGTGTTGTATCAT	3048	False	NA	NA	False	ATTAAA	-21	NA	20199425	20177038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20190699_20191885_20192239_20199306
ES.4380.13	chr11	-	3883	7	NNC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	4	-684	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	39.6712182262602	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGTTATGTTTGAGC	3048	False	NA	NA	False	AATACA	-19	NA	20199425	20177720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20192129_20192239_20199306
ES.4380.14	chr11	-	4146	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-27	685	-16	-685	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTGTTATGTTTGAG	3028	False	NA	NA	False	AATACA	-18	NA	20199445	20177721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.15	chr11	-	3644	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-30	1190	-19	-1190	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATTAGTTTTATTCTGC	3025	False	NA	NA	False	NA	NA	NA	20199448	20178226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.16	chr11	-	3209	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	4	1591	4	-1591	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTATTTAGATAAGCATG	3059	False	NA	NA	False	TTTAAA	-8	NA	20199414	20178627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.17	chr11	-	2590	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	18	2196	-17	-2196	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTCTCGTGTTTAAAAA	3073	False	NA	-15	True	GATAAA	-13	NA	20199400	20179232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.18	chr11	-	173	1	Intergenic	novelGene_3370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	20180919	20180746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20180700_20180900
ES.4380.19	chr11	-	2759	1	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	12692	4453	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	20186691	20183932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20183900_20186700
ES.4380.2	chr11	-	5467	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-34	-629	-23	629	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGCGTTCATGTTTTCAT	3021	False	NA	NA	False	AATAAA	-26	NA	20199452	20176407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.20	chr11	-	3412	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	-3	-621	-3	620	multi-exon	FALSE	canonical	3	111	junction_1	11	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTTGAATTGGAGGGT	3041	False	NA	NA	False	NA	NA	NA	20199432	20187765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20190699_20191885_20192239_20199306
ES.4380.21	chr11	-	2798	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-8	-619	3	619	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATTTTGAATTGGAGGG	3047	False	NA	NA	False	NA	NA	NA	20199426	20187766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.22	chr11	-	4584	2	FSM	ENSMUSG00000044066.15	ENSMUST00000161218.2	793	2	-40	-3751	-5	614	multi-exon	FALSE	canonical	3	133	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGTATTTTGAATTG	3050	False	NA	NA	False	NA	NA	NA	20199423	20187771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20192239_20199306
ES.4380.23	chr11	-	2782	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	6	0	-5	0	multi-exon	FALSE	canonical	3	111	junction_1	11	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTAGCTCAGTTGAC	3050	False	NA	-9	True	AATAAA	-16	NA	20199423	20188386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20190699_20191885_20192239_20199306
ES.4380.24	chr11	-	2203	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	-33	1	-22	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTAGCTCAGTTGAC	3022	False	NA	-9	True	AATAAA	-16	NA	20199451	20188386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.25	chr11	-	2497	3	NNC	ENSMUSG00000044066.15	novel	2788	3	NA	NA	0	-1	intron_retention	FALSE	canonical	2	2	junction_1	65.5	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTGTAGCTCAGTTGA	3090	False	NA	-10	True	AATAAA	-15	NA	20199383	20188387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20190699_20192129_20192239_20199306
ES.4380.26	chr11	-	3959	2	FSM	ENSMUSG00000044066.15	ENSMUST00000161218.2	793	2	-31	-3135	4	-1	multi-exon	FALSE	canonical	3	133	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTGTAGCTCAGTTGA	3059	False	NA	-10	True	AATAAA	-15	NA	20199414	20188387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20192239_20199306
ES.4380.27	chr11	-	618	1	NIC	ENSMUSG00000044066.15	novel	2788	3	NA	NA	-5	-7283	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAATAATAA	3050	False	NA	NA	False	NA	NA	NA	20199423	20198805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20198800_20199400
ES.4380.3	chr11	-	5314	7	NNC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	-9	620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.164092587345	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCCATCTAGCGTTCA	3081	False	NA	NA	False	AATAAA	-17	NA	20199392	20176416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20179482_20180423_20180511_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.4	chr11	-	5196	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	-5	-387	-5	387	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTTATCAACAGCC	3050	False	NA	NA	False	ATTAAA	-12	NA	20199423	20176649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ES.4380.5	chr11	-	5742	6	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	-17	349	intron_retention	FALSE	canonical	3	49	junction_3	32.6778212248002	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTTAATATTTTAT	3073	False	NA	NA	False	AATAAA	-19	NA	20199400	20176687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20190699_20191885_20192239_20199306
ES.4380.6	chr11	-	5142	7	NNC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	3	349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.1341576428189	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTTAATATTTTAT	3058	False	NA	NA	False	AATAAA	-19	NA	20199415	20176687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189203_20190699_20191885_20192239_20199306
ES.4380.7	chr11	-	4815	6	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	-6	347	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	29.2889057494472	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAGTTTAATATTTT	3038	False	NA	NA	False	AATAAA	-17	NA	20199435	20176689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20199306
ES.4380.8	chr11	-	5899	3	NNC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	15666	346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTAGTTTAATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	20183717	20176690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20179482_20180423_20181924_20182109
ES.4380.9	chr11	-	3644	4	NIC	ENSMUSG00000044066.15	novel	4804	7	NA	NA	9555	346	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.0030862874591	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTAGTTTAATATTT	NA	False	NA	NA	False	AATAAA	-16	NA	20189828	20176690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20179482_20186005_20186103_20188465_20188589_20189195
ES.4381.1	chr11	-	178	1	Intergenic	novelGene_3371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	20219307	20219129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20219100_20219300
ES.4381.10	chr11	-	4012	9	NNC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	133.084324771928	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7772	False	NA	-5	True	NA	NA	NA	20282702	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20273600_20273723_20281945
ES.4381.11	chr11	-	5922	7	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	-58	-2	intron_retention	FALSE	canonical	3	286	junction_3	12.0646407139026	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTAACGTGTTTT	7703	False	NA	-7	True	NA	NA	NA	20282771	20252206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.12	chr11	-	3531	8	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	107.813141450325	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTAACGTGTTTT	7761	False	NA	-7	True	NA	NA	NA	20282713	20252206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20282313
ES.4381.13	chr11	-	7144	6	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	11	-2	intron_retention	FALSE	canonical	3	286	junction_2	12.5698050899765	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTAACGTGTTTT	7772	False	NA	-7	True	NA	NA	NA	20282702	20252206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.14	chr11	-	11492	6	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	10365	-4	intron_retention	FALSE	non_canonical	0	0	junction_4	122.701915225476	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCCTGAGTAACGTGTT	NA	False	NA	-9	True	NA	NA	NA	20272319	20252208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20265849_20266112_20268723_20270191
ES.4381.16	chr11	-	4025	9	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	132.072364160713	431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCCTGAGTAACGTGTT	7755	False	NA	-9	True	NA	NA	NA	20282719	20252208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20266601_20266724_20268659_20268723_20270191_20270235_20281945
ES.4381.19	chr11	-	3577	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	391	-42	-366	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTATGGTATCCTGA	7719	False	NA	70	True	GATAAA	-19	NA	20282755	20252570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.2	chr11	-	175	2	Intergenic	novelGene_3372	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACTTATAAA	NA	False	NA	NA	False	NA	NA	NA	20358969	20219130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20219209_20358872
ES.4381.20	chr11	-	3427	9	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	11	-366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.82145832289	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTATGGTATCCTGA	7772	False	NA	70	True	GATAAA	-19	NA	20282702	20252570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20253846_20253942_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.21	chr11	-	5483	7	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	14	-369	intron_retention	FALSE	canonical	3	286	junction_3	12.0646407139026	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTCTATGGTATCC	7775	False	NA	67	True	GATAAA	-16	NA	20282699	20252573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.23	chr11	-	3414	8	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	-3	-441	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	136.548115164956	429	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTGTATGTGT	7787	False	NA	-5	True	NA	NA	NA	20282687	20252645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264073_20268659_20268713_20270191_20270235_20281945
ES.4381.25	chr11	-	3423	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-27	530	-27	-505	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGGTATTTTTTCAGT	7734	False	NA	-69	True	TTTAAA	-34	NA	20282740	20252709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.26	chr11	-	3186	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	782	-42	-757	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTTTCTCTGCTGTGT	7719	False	NA	NA	False	NA	NA	NA	20282755	20252961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.27	chr11	-	2751	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	1217	-42	-1192	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTCTGGTTTCCACAG	7719	False	NA	-20	True	AATAAA	-30	NA	20282755	20253396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.28	chr11	-	4661	7	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	9	-1196	intron_retention	FALSE	canonical	3	286	junction_3	12.0646407139026	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCCCTGTCTGGTTTCC	7770	False	NA	-24	True	AATAAA	-26	NA	20282704	20253400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.29	chr11	-	2520	6	ISM	ENSMUSG00000020142.13	ENSMUST00000004634.7	3872	8	-9	4617	-9	-4617	5prime_fragment	FALSE	canonical	3	286	junction_2	12.5698050899765	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACAGTTTGTTTTTGGT	7781	False	NA	NA	False	NA	NA	NA	20282693	20256821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.3	chr11	-	3999	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-73	0	-73	0	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTTTGAGTCC	7688	False	NA	20	True	NA	NA	NA	20282786	20252179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.30	chr11	-	1604	6	ISM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	-42	5620	-42	-5595	5prime_fragment	FALSE	canonical	3	286	junction_2	12.5698050899765	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCTCCTCTGTAAAG	7719	False	NA	NA	False	AAAAAG	-10	NA	20282755	20257799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.31	chr11	-	2042	1	Intergenic	novelGene_3373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGGTTTTGGACTTGGT	NA	False	NA	NA	False	NA	NA	NA	20274373	20272331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20272300_20274400
ES.4381.32	chr11	-	2231	1	Intergenic	novelGene_3374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGTGTAAAAC	9436	False	NA	NA	False	NA	NA	NA	20280254	20278023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20278000_20280300
ES.4381.33	chr11	-	903	2	NNC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	-11	-29278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCGTTGCCCAGCTACG	7779	False	NA	NA	False	AATAAA	-19	NA	20282695	20281482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20281636_20281945
ES.4381.34	chr11	-	1277	1	FSM	ENSMUSG00000078965.6	ENSMUST00000180654.2	1002	1	-73	-202	-73	202	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTTTAAAGCACTAGAG	4388	False	NA	NA	False	AATAAA	-38	NA	20286086	20284809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20284800_20286100
ES.4381.35	chr11	-	1235	2	Genic_Genomic	ENSMUSG00000078965.6	novel	1002	1	NA	NA	-71	201	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCTTTAAAGCACTAGA	4390	False	NA	NA	False	AATAAA	-37	NA	20286084	20284810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_20285495_20285533
ES.4381.36	chr11	-	1040	1	Intergenic	novelGene_3375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCAGAGCTACAACACT	NA	False	NA	NA	False	NA	NA	NA	20306114	20305074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20305100_20306100
ES.4381.4	chr11	-	6244	1	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	24236	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	NA	False	NA	-5	True	NA	NA	NA	20258448	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20252200_20258400
ES.4381.5	chr11	-	5234	7	NIC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	-42	0	intron_retention	FALSE	canonical	3	286	junction_3	12.0646407139026	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7719	False	NA	-5	True	NA	NA	NA	20282755	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20254501_20256465_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.6	chr11	-	3080	6	NNC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	18205	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	120.761914526062	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	NA	False	NA	-5	True	NA	NA	NA	20264479	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20264426
ES.4381.7	chr11	-	3736	7	NIC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	114.186129727836	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7731	False	NA	-5	True	NA	NA	NA	20282743	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20254501_20256465_20256601_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ES.4381.8	chr11	-	8469	7	NIC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	286	junction_4	11.3198449145246	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7770	False	NA	-5	True	NA	NA	NA	20282704	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20268723_20270191_20270235_20281945
ES.4381.9	chr11	-	9884	6	NNC	ENSMUSG00000020142.13	novel	3872	8	NA	NA	11976	0	intron_retention	FALSE	non_canonical	0	0	junction_4	122.701915225476	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	NA	False	NA	-5	True	NA	NA	NA	20270708	20252204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20256601_20257891_20258087_20258403_20258638_20263915_20265851_20266115_20268723_20270191
ES.4382.1	chr11	+	725	1	FSM	ENSMUSG00000083878.4	ENSMUST00000119032.2	399	1	-297	-29	-297	29	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAGAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-5	NA	20396114	20396839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20396100_20396800
ES.4383.1	chr11	+	215	1	Intergenic	novelGene_3376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTATCTCCCTGC	NA	False	NA	NA	False	AAAAAG	-4	NA	20398404	20398619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20398400_20398600
ES.4384.1	chr11	+	174	1	Intergenic	novelGene_3377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATTTTATT	NA	False	NA	NA	False	NA	NA	NA	20402403	20402577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20402400_20402600
ES.4385.1	chr11	+	1960	1	Intergenic	novelGene_3378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCTGGTTTAGATCT	NA	False	NA	NA	False	NA	NA	NA	20409424	20411384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20409400_20411400
ES.4386.1	chr11	+	4355	1	Intergenic	novelGene_3379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATGGACTCTGACACT	NA	False	NA	NA	False	NA	NA	NA	20420706	20425061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20420700_20425100
ES.4386.2	chr11	+	4171	4	Intergenic	novelGene_3381	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACTCAAATGGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	20420706	20425240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20420927_20421163_20421961_20422001_20424146_20424230
ES.4386.3	chr11	+	3993	4	Intergenic	novelGene_3380	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTCTGACACTGACT	NA	False	NA	NA	False	NA	NA	NA	20420706	20425065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20420927_20421163_20421961_20422001_20424142_20424229
ES.4386.4	chr11	+	1226	4	Intergenic	novelGene_3382	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCCAGCTCCGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	20420707	20426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20420927_20421163_20421314_20422228_20422294_20425624
ES.4386.5	chr11	+	3918	2	Intergenic	novelGene_3383	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCCAGCTCCGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	20422416	20426416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20424148_20424229
ES.4387.1	chr11	-	2192	2	Intergenic	novelGene_3384	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTCCTCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	20427542	20425252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20426551_20426648
ES.4388.1	chr11	+	6309	1	Intergenic	novelGene_3385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTCCATATTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	20437695	20444004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20437700_20444000
ES.4389.1	chr11	-	3462	1	Intergenic	novelGene_3386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAACAACAACAGAA	NA	False	NA	NA	False	NA	NA	NA	20450507	20447045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20447000_20450500
ES.439.1	chr1	+	2590	23	NNC	ENSMUSG00000062939.12	novel	2982	24	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	8.55089285367565	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATTTGTTTCTGGTTT	NA	False	NA	NA	False	AATATA	-17	NA	52047788	52146342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ES.439.2	chr1	+	8461	23	NNC	ENSMUSG00000062939.12	novel	2982	24	NA	NA	9	5850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	8.59908221126145	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATCCTTAGTAGG	NA	False	NA	NA	False	NA	NA	NA	52047793	52152198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118884_52118993_52121676_52121737_52122117_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ES.439.3	chr1	+	1825	1	NIC	ENSMUSG00000062939.12	novel	2982	24	NA	NA	11	-61983	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52047795	52049620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52047800_52049600
ES.439.5	chr1	+	175	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGCCAATATAGAA	NA	False	NA	NA	False	NA	NA	NA	52055907	52056082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_52055900_52056100
ES.439.6	chr1	+	2280	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52062691	52064971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_52062700_52065000
ES.4390.1	chr11	-	4344	1	Intergenic	novelGene_3387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACAGTTGTTGTGGTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	20488057	20483713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20483700_20488100
ES.4391.1	chr11	+	1846	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	-97	3898	-16	58	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATATATCTATATTATT	NA	False	NA	22	True	NA	NA	NA	20493236	20599123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20493761_20597801
ES.4391.2	chr11	+	1923	3	NIC	ENSMUSG00000049800.14	novel	639	3	NA	NA	-8	58	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATATATCTATATTATT	NA	False	NA	22	True	NA	NA	NA	20493244	20599123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_20493761_20545129_20545215_20597801
ES.4391.3	chr11	+	2052	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	-10	3605	-10	351	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATAGGACTTGTAAT	NA	False	NA	NA	False	NA	NA	NA	20493323	20599416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20493761_20597801
ES.4391.4	chr11	+	5636	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCACAGTTTTCTTGT	NA	False	NA	17	True	AATAAA	-17	NA	20493344	20603021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20493761_20597801
ES.4391.5	chr11	+	801	1	Intergenic	novelGene_3388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTGGAGTCCCTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	20501525	20502326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20501500_20502300
ES.4391.6	chr11	+	5526	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	-11	0	-11	0	multi-exon	FALSE	canonical	3	14	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCACAGTTTTCTTGT	NA	False	NA	17	True	AATAAA	-17	NA	20581967	20603021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_20582274_20597801
ES.4391.7	chr11	+	2706	1	Intergenic	novelGene_3391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	63	False	NA	NA	False	NA	NA	NA	20594105	20596811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20594100_20596800
ES.4392.1	chr11	-	306	1	Intergenic	novelGene_3389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2467	False	NA	NA	False	NA	NA	NA	20540434	20540128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20540100_20540400
ES.4392.2	chr11	-	155	1	Intergenic	novelGene_3390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGAAGGAGCC	2467	False	NA	NA	False	NA	NA	NA	20540434	20540279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20540300_20540400
ES.4393.1	chr11	-	1928	1	Antisense	novelGene_ENSMUSG00000049800.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCCCCACCCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	20545942	20544014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_20544000_20545900
ES.4393.2	chr11	-	5580	1	Antisense	novelGene_ENSMUSG00000049800.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTCAAATTTAGAGACA	NA	False	NA	NA	False	NA	NA	NA	20551424	20545844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_20545800_20551400
ES.4394.1	chr11	+	2356	1	Intergenic	novelGene_3393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCCTGTTGGAAGTGC	NA	False	NA	NA	False	NA	NA	NA	20611173	20613529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_20611200_20613500
ES.4395.1	chr11	-	3962	1	Intergenic	novelGene_3392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	20613916	20609954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20610000_20613900
ES.4396.1	chr11	+	3000	2	Antisense	novelGene_ENSMUSG00000049659.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACACACGATAGTTAAC	3579	False	NA	NA	False	NA	NA	NA	20635681	20644947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20636198_20642463
ES.4396.2	chr11	+	5995	1	Antisense	novelGene_ENSMUSG00000049659.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6821	False	NA	NA	False	ATTAAA	-29	NA	20638923	20644918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_20638900_20644900
ES.4397.1	chr11	-	4116	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	-23	-95	-23	95	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATTTGGTAGGACTTC	9237	False	NA	NA	False	AATAAA	-15	NA	20691612	20634988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.10	chr11	-	3910	8	NIC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	19	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	55.7699355772061	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	9279	False	NA	NA	False	AATAAA	-8	NA	20691570	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20636199_20642464_20642589_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.11	chr11	-	3746	9	NNC	ENSMUSG00000049659.16	novel	3763	9	NA	NA	24	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	65.9875698522078	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	NA	False	NA	NA	False	AATAAA	-8	NA	20677583	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658481_20658578_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ES.4397.13	chr11	-	6157	3	ISM	ENSMUSG00000049659.16	ENSMUST00000176782.2	877	5	22934	-1026	8992	-8	3prime_fragment	FALSE	canonical	3	150	junction_1	7	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	3654	False	NA	NA	False	AATAAA	-8	NA	20653238	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20636199_20642464_20642589_20648312
ES.4397.14	chr11	-	9218	9	NNC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	4045	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	51.5072810387036	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	7507	False	NA	NA	False	AATAAA	-8	NA	20687410	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20681898
ES.4397.15	chr11	-	3997	10	NIC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	-60	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	66.2991722943325	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	9334	False	NA	NA	False	AATAAA	-8	NA	20691515	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20636199_20642464_20642589_20646750_20646832_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.16	chr11	-	4879	9	NIC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	52	3	intron_retention	FALSE	canonical	0	0	junction_2	53.8980519128475	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCTGTCTGAAACCCC	9312	False	NA	NA	False	AATAAA	-23	NA	20691537	20635712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20636199_20642464_20642589_20646750_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.17	chr11	-	3348	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	21	629	21	3	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCTGTCTGAAACCCC	9281	False	NA	NA	False	AATAAA	-23	NA	20691568	20635712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.19	chr11	-	3000	6	NIC	ENSMUSG00000049659.16	novel	3082	8	NA	NA	-26	4	intron_retention	FALSE	canonical	0	0	junction_5	62.4896791478401	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTTTATATTTTATT	9368	False	NA	NA	False	AATAAA	-22	NA	20691481	20646008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20691305
ES.4397.2	chr11	-	3881	8	NIC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	-7	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	57.7033228626199	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTTGTCTTTGTATCT	9253	False	NA	NA	False	AATAAA	-19	NA	20691596	20635080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20662163_20662316_20675684_20677640_20691305
ES.4397.20	chr11	-	5040	7	ISM	ENSMUSG00000049659.16	ENSMUST00000177543.8	3082	8	-113	10269	21	2	5prime_fragment	FALSE	canonical	3	125	junction_5	19.2757763930679	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAATGTTTATATTTTA	9281	False	NA	NA	False	AATAAA	-20	NA	20691568	20646010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.21	chr11	-	2597	5	ISM	ENSMUSG00000049659.16	ENSMUST00000177543.8	3082	8	-87	22870	47	15	5prime_fragment	FALSE	canonical	3	125	junction_3	22.61083810919	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTATCTTGAGACATG	9307	False	NA	NA	False	TTTAAA	-36	NA	20691542	20658611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.22	chr11	-	3879	3	NIC	ENSMUSG00000049659.16	novel	4147	8	NA	NA	401	15	intron_retention	FALSE	canonical	3	125	junction_2	11	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTATCTTGAGACATG	NA	False	NA	NA	False	TTTAAA	-36	NA	20676741	20658611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20658738_20659619_20662316_20675684
ES.4397.23	chr11	-	3574	1	Antisense	novelGene_ENSMUSG00000084252.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAGAAGAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	20681800	20678226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_20678200_20681800
ES.4397.5	chr11	-	5473	9	NNC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	-52	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	53.8980519128475	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTAGCCTTTTGTCTTT	9342	False	NA	NA	False	AATAAA	-13	NA	20691507	20635086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20636199_20642464_20642587_20646750_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.6	chr11	-	4034	10	NNC	ENSMUSG00000049659.16	novel	3998	9	NA	NA	-55	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.931879872075	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	9339	False	NA	NA	False	AATAAA	-8	NA	20691510	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20636199_20641948_20642072_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.7	chr11	-	3992	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	-2	8	-2	-8	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	9258	False	NA	NA	False	AATAAA	-8	NA	20691591	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ES.4397.8	chr11	-	3318	3	NIC	ENSMUSG00000049659.16	novel	3082	8	NA	NA	28	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	94	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTTTTG	9288	False	NA	NA	False	AATAAA	-8	NA	20691561	20635091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20636199_20675684_20677640_20691305
ES.4398.1	chr11	-	159	1	Intergenic	novelGene_3394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	20716209	20716050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_20716000_20716200
ES.4399.1	chr11	-	3794	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-208	-224	-208	224	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGCCCTGACCTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	20781264	20773351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ES.4399.10	chr11	-	4706	2	ISM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	18	4	-16	-4	intron_retention	FALSE	canonical	3	360	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAGCTTCTGGGTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	20781038	20773579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_20776516_20779268
ES.4399.12	chr11	-	6099	4	NIC	ENSMUSG00000042363.15	novel	3362	5	NA	NA	12	-4	intron_retention	FALSE	canonical	3	286	junction_3	14.8847423745107	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAGCTTCTGGGTTATT	NA	False	NA	-7	True	AATAAA	-13	NA	20781044	20773579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_20779447_20780037_20780127_20780275_20780348_20780973
ES.4399.15	chr11	-	1365	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-12	2009	-12	765	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTTTGCATTGCTT	NA	False	NA	NA	False	GATAAA	-27	NA	20781068	20775584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ES.4399.16	chr11	-	819	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	31	2512	-3	262	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGATAGCAATTACTC	NA	False	NA	NA	False	ACTAAA	-25	NA	20781025	20776087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ES.4399.3	chr11	-	3636	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	-270	-4	-270	4	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTACATGCTG	NA	False	NA	1	True	AATAAA	-21	NA	20781326	20773571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ES.4399.4	chr11	-	3597	5	NNC	ENSMUSG00000042363.15	novel	3362	5	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	143.402187919153	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGGGTTATTACATGC	NA	False	NA	-1	True	AATAAA	-19	NA	20780784	20773573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780468
ES.4399.8	chr11	-	3440	6	Fusion	ENSMUSG00000042363.15_ENSMUSG00000086749.2	novel	3362	5	NA	NA	177	-2	multi-exon	FALSE	canonical	0	0	junction_4	162.69529802671	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTTCTGGGTTATTAC	NA	False	NA	-5	True	AATAAA	-15	NA	20781742	20773577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20781448_20781559_20781689
ES.44.1	chr1	-	3561	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCATAGCATGTATGAA	NA	False	NA	NA	False	NA	NA	NA	7171886	7168325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_7168300_7171900
ES.440.1	chr1	-	776	2	FSM	ENSMUSG00000109599.2	ENSMUST00000210323.2	1170	2	8	386	8	-386	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAACTAACTTTGAT	2504	False	NA	NA	False	NA	NA	NA	52152902	52147665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52148419_52152879
ES.4400.1	chr11	+	3701	8	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	5	5	intron_retention	FALSE	canonical	1	1	junction_2	62.5224857510464	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAATTTGTCTGTGTGGGT	NA	False	NA	32	True	AGTAAA	-20	NA	21041295	21100328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21056980_21057168_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.10	chr11	+	3069	6	ISM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	920	35	1	intron_retention	FALSE	canonical	3	114	junction_5	15.0917195839308	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	TATAAA	-28	NA	21041325	21099403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257
ES.4400.11	chr11	+	4802	8	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	35	31	intron_retention	FALSE	canonical	0	0	junction_4	63.1855059587664	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	21041325	21099433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21092806_21095020_21096914_21097113_21097257_21097447_21097956
ES.4400.12	chr11	+	3725	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	-246	35	246	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGTCCTGAACTTTC	NA	False	NA	NA	False	GATAAA	-2	NA	21041325	21100569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.13	chr11	+	2357	5	NIC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	35	31	intron_retention	FALSE	canonical	0	0	junction_2	55.9123197515539	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	21041325	21099433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21041679_21086045_21086186_21096914_21097113_21097257_21097447_21097956
ES.4400.14	chr11	+	2779	8	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	37	0	intron_retention	FALSE	canonical	0	0	junction_1	62.9648427979569	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	TATAAA	-27	NA	21041327	21099402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21056944_21057168_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.15	chr11	+	3279	6	NIC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	37	0	intron_retention	FALSE	canonical	1	2	junction_4	57.1335278098596	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCGAATTTGTCTGTG	NA	False	NA	27	True	AGTAAA	-15	NA	21041327	21100323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21097257_21097447_21097956
ES.4400.16	chr11	+	2473	7	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	45	-1	intron_retention	FALSE	canonical	0	0	junction_5	53.3877326733399	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	TATAAA	-26	NA	21041335	21099401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097039_21097257_21097447_21097956
ES.4400.17	chr11	+	2502	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	118	894	118	27	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21041408	21099429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.18	chr11	+	3706	5	ISM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	5188	-813	5188	813	3prime_fragment	FALSE	canonical	3	114	junction_3	10.1734949746879	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAATGTCTGTATTTTG	NA	False	NA	NA	False	NA	NA	NA	21090656	21101136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.19	chr11	+	4845	3	ISM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	8434	921	8434	0	3prime_fragment	FALSE	canonical	3	114	junction_1	10.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	871	False	NA	NA	False	TATAAA	-27	NA	21093902	21099402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21097113_21097257_21097447_21097956
ES.4400.2	chr11	+	3483	7	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	52.8753775925577	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTATGCGAATTTGTCTG	NA	False	NA	25	True	AGTAAA	-13	NA	21041295	21100321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041683_21086073_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.20	chr11	+	4045	2	NIC	ENSMUSG00000020134.14	novel	3703	6	NA	NA	9410	31	intron_retention	FALSE	canonical	3	135	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAATCCT	1847	False	NA	NA	False	NA	NA	NA	21094878	21099433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21097447_21097956
ES.4400.21	chr11	+	3480	3	ISM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	10722	-2	10722	2	3prime_fragment	FALSE	canonical	3	114	junction_1	10.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGAATTTGTCTGTGTG	372	False	NA	29	True	AGTAAA	-17	NA	21096190	21100325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21097113_21097257_21097447_21097956
ES.4400.3	chr11	+	3508	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	12	-6	12	6	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATTTGTCTGTGTGGGTT	NA	False	NA	33	True	AGTAAA	-21	NA	21041302	21100329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.4	chr11	+	2709	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	12	793	12	128	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTATTTGGATTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	21041302	21099530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.5	chr11	+	6449	7	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	12	617	intron_retention	FALSE	canonical	0	0	junction_6	52.8753775925577	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCAGGGACAGGACAG	NA	False	NA	NA	False	NA	NA	NA	21041302	21100940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21097113_21097257_21097447_21097956_21098547_21100473
ES.4400.6	chr11	+	2709	8	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	32	39	intron_retention	FALSE	canonical	0	0	junction_1	63.1855059587664	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAATCCTATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	21041322	21099441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21050473_21050583_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.7	chr11	+	3706	8	NNC	ENSMUSG00000020134.14	novel	3514	7	NA	NA	33	2	intron_retention	FALSE	canonical	0	0	junction_1	62.9648427979569	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGAATTTGTCTGTGTG	NA	False	NA	29	True	AGTAAA	-17	NA	21041323	21100325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21041679_21056944_21057168_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.8	chr11	+	3164	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	315	35	-315	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTAGAAGCCATGAACT	NA	False	NA	NA	False	ATTAAA	-11	NA	21041325	21100008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4400.9	chr11	+	2286	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	35	1193	35	-272	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTAATTACCATT	NA	False	NA	NA	False	CATAAA	-23	NA	21041325	21099130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ES.4401.1	chr11	-	114	1	Intergenic	novelGene_3395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21047577	21047463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21047500_21047600
ES.4402.1	chr11	-	128	1	Intergenic	novelGene_3396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGCATATG	NA	False	NA	NA	False	NA	NA	NA	21061951	21061823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21061800_21062000
ES.4403.1	chr11	+	161	1	Intergenic	novelGene_3397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	21183419	21183580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_21183400_21183600
ES.4404.1	chr11	+	4323	23	NNC	ENSMUSG00000020128.16	novel	2914	19	NA	NA	-1520	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.928263360058	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21187760	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21187901_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.10	chr11	+	5075	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-713	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3179595837365	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCAATGGTACAGTAT	NA	False	NA	34	True	AATAAA	-30	NA	21188567	21271137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.100	chr11	+	4449	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-319	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	77.6876349236982	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188961	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752_21270710_21270888
ES.4404.101	chr11	+	3693	20	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-319	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	78.5423646645007	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATATTTGCATTTACT	NA	False	NA	-15	True	TATAAA	-5	NA	21188961	21270524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21269805
ES.4404.102	chr11	+	3963	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-318	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	79.4172993623967	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTATGCAACTACTAATT	NA	False	NA	1	True	AATAAA	-14	NA	21188962	21270540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21225079_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.103	chr11	+	4750	22	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-318	6192	intron_retention	FALSE	canonical	0	0	junction_21	81.105541386131	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGATGAGGTTCGGAG	NA	False	NA	NA	False	AATAAA	-2	NA	21188962	21277328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752_21270344_21277310
ES.4404.104	chr11	+	4564	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-317	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	84.9440871037196	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21188963	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21264997_21266788_21266887_21269752
ES.4404.105	chr11	+	3596	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-317	56	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	95.8573427823308	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188963	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21225088_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.106	chr11	+	3735	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-310	55	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	94.0134068160336	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188970	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264956_21265027_21266791_21266887_21269752
ES.4404.107	chr11	+	4217	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-307	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	83.8293228643822	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188973	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250058_21255751_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.108	chr11	+	4153	20	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-307	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	119.869342535022	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188973	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21225049_21225130_21227674_21228061_21241032_21241143_21242033_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256454_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.109	chr11	+	4061	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-299	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3179595837365	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACTTATGCAACTACTA	NA	False	NA	-2	True	AATAAA	-11	NA	21188981	21270537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.11	chr11	+	4965	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-706	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	85.1246048279076	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACTTTTTTCAATGGTA	NA	False	NA	28	True	AATAAA	-24	NA	21188574	21271131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262873_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.110	chr11	+	4307	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-293	-7	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	95.8573427823308	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188987	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21225088_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.111	chr11	+	3836	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-290	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	95.5097316692776	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATGCAACTACTAATTT	NA	False	NA	2	True	AATAAA	-15	NA	21188990	21270541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.112	chr11	+	3718	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-283	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	95.5393995140441	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTAGGAATTCAGTTT	NA	False	NA	0	True	AATAAA	-16	NA	21188997	21270376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221766_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.115	chr11	+	5768	24	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-274	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	110.404258020404	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAACTACTAATTTAAA	NA	False	NA	5	True	AATAAA	-18	NA	21189006	21270544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21222313_21224232_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.116	chr11	+	4402	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-261	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.6876349236982	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21189019	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189144_21189310_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.118	chr11	+	4589	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-233	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	98.2830102027708	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21189047	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258043_21258092_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.119	chr11	+	7918	5	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-230	-13600	intron_retention	FALSE	canonical	3	27	junction_2	126.080083677003	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATAGGGCTGGAGCGA	NA	False	NA	NA	False	NA	NA	NA	21189050	21228631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21225130_21227674
ES.4404.12	chr11	+	5059	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-704	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	123.008567792949	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGATGTACAAAA	NA	False	NA	-4	True	NA	NA	NA	21188576	21271099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21190053_21190133_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262236_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.120	chr11	+	3776	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-111	55	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	97.4326581457467	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21189169	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21265824_21265924_21266791_21266887_21269752
ES.4404.121	chr11	+	3204	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	45	54	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	93.2355942387769	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21189325	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214826_21214872_21218784_21218864_21221703_21221739_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.122	chr11	+	4282	22	NNC	ENSMUSG00000020128.16	novel	623	4	NA	NA	162	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.437568745064	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21189442	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189593_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.123	chr11	+	4343	23	NNC	ENSMUSG00000020128.16	novel	2914	19	NA	NA	186	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2405585271992	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21189466	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189593_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.125	chr11	+	3904	21	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-4113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.540986694941	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21214671	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21214872_21218786_21218864_21221703_21221739_21225088_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262873_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.126	chr11	+	3839	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-4002	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	78.3134581820156	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21214782	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752_21270512_21270580
ES.4404.127	chr11	+	8235	1	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-1066	-16278	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAGTTAAAATATATTC	NA	False	NA	NA	False	NA	NA	NA	21217718	21225953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21217700_21226000
ES.4404.128	chr11	+	3017	18	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-2805	2	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_10	83.8374601427273	590	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATGCAACTACTAAT	4099	False	NA	0	True	AATAAA	-13	NA	21225097	21270539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258744_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.129	chr11	+	5013	14	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	9	-2	intron_retention	FALSE	canonical	2	6	junction_6	90.0109789490201	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTTAAAAGGCAACTTT	6913	False	NA	17	True	AATAAA	-13	NA	21227911	21271120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.13	chr11	+	4073	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-704	55	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	73.6392816481319	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188576	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.130	chr11	+	3846	16	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	24	0	intron_retention	FALSE	canonical	2	6	junction_6	89.4704420465217	589	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	6928	False	NA	33	True	AATAAA	-29	NA	21227926	21271136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.131	chr11	+	162	1	Intergenic	novelGene_3400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	536	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	21238145	21238307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_21238100_21238300
ES.4404.132	chr11	+	2059	12	ISM	ENSMUSG00000020128.16	ENSMUST00000132017.2	2914	19	31191	-55	-288	55	3prime_fragment	FALSE	canonical	3	254	junction_4	42.0226227935178	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	5671	False	NA	3	True	AATAAA	-19	NA	21249975	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.133	chr11	+	4888	5	NIC	ENSMUSG00000020128.16	novel	2914	19	NA	NA	-3733	55	intron_retention	FALSE	canonical	3	282	junction_2	27.5363396260287	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	2838	False	NA	3	True	AATAAA	-19	NA	21258771	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21258803_21261076_21261183_21262239_21262328_21262850_21266887_21269752
ES.4404.134	chr11	+	9098	3	NNC	ENSMUSG00000020128.16	novel	3591	2	NA	NA	-143	425	intron_retention	TRUE	non_canonical	0	0	junction_1	0	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGACTGGCTAGTGATA	3186	False	NA	NA	False	AATGAA	-21	NA	21262361	21271561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21265938_21265978_21267668_21267728
ES.4404.135	chr11	+	2203	3	ISM	ENSMUSG00000020128.16	ENSMUST00000132017.2	2914	19	44921	-215	-375	2	3prime_fragment	FALSE	canonical	3	321	junction_1	9	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATGCAACTACTAAT	4530	False	NA	0	True	AATAAA	-13	NA	21263705	21270539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21265027_21266791_21266887_21269752
ES.4404.14	chr11	+	4503	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-681	501	-681	98	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTAGCATTCTGTTTTT	NA	False	NA	96	True	ATTAAA	-17	NA	21188599	21270635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.15	chr11	+	4143	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-679	56	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	71.8904699485369	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188601	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.16	chr11	+	4283	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-679	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.3179595837365	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188601	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.17	chr11	+	4109	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-678	52	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	80.3555308480286	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTAGGAATTCAGTTT	NA	False	NA	0	True	AATAAA	-16	NA	21188602	21270376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.18	chr11	+	4981	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-678	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_15	77.0073652160666	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188602	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258744_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.19	chr11	+	5078	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-661	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	98.1157065482157	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188619	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221386_21221502_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.2	chr11	+	5060	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-775	-12	-775	-2	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTTCAATGGTACAG	NA	False	NA	31	True	AATAAA	-27	NA	21188505	21271134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.20	chr11	+	4868	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-659	3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	71.8904699485369	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGCAACTTTTTTCA	NA	False	NA	22	True	AATAAA	-18	NA	21188621	21271125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.21	chr11	+	4324	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-609	558	-609	27	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTCCAGAAGTGGGATA	NA	False	NA	25	True	AATAAA	-38	NA	21188671	21270564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.22	chr11	+	4931	24	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-582	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	100.780095253199	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTAAAAGGCAACTT	NA	False	NA	16	True	AATAAA	-12	NA	21188698	21271119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21190053_21190133_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.23	chr11	+	4780	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-548	2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	78.5193766977732	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	NA	False	NA	21	True	AATAAA	-17	NA	21188732	21271124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.24	chr11	+	3953	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-540	910	-540	-98	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTCCCACCTTATTT	NA	False	NA	NA	False	ATTAAA	-36	NA	21188740	21270226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.25	chr11	+	3856	21	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-500	56	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	102.300977512436	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188780	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.26	chr11	+	8571	21	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-479	1	intron_retention	FALSE	canonical	3	201	junction_2	47.933912838407	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21188801	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.27	chr11	+	4878	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-477	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	97.4326581457467	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188803	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21265824_21265924_21266791_21266887_21269752
ES.4404.29	chr11	+	3892	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-459	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.6876349236982	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188821	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189153_21189284_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.3	chr11	+	4868	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-754	2	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	73.6392816481319	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	NA	False	NA	21	True	AATAAA	-17	NA	21188526	21271124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.30	chr11	+	4170	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-453	96	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	71.8904699485369	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGTAGCATTCTGTTT	NA	False	NA	94	True	ATTAAA	-15	NA	21188827	21270633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.31	chr11	+	3293	22	ISM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-397	4243	-397	1886	5prime_fragment	FALSE	canonical	3	123	junction_2	57.138095039666	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTATGAATGATTC	NA	False	NA	NA	False	AATAAA	-15	NA	21188883	21266879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791
ES.4404.32	chr11	+	4206	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-385	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	97.4326581457467	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTACTTATGCAACTAC	NA	False	NA	-4	True	AATAAA	-9	NA	21188895	21270535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21265824_21265924_21266791_21266887_21269752
ES.4404.33	chr11	+	5180	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-384	0	intron_retention	FALSE	canonical	3	123	junction_2	57.3345593920479	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188896	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.34	chr11	+	4596	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-384	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.6506106675118	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188896	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214719_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.35	chr11	+	3836	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-384	56	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	84.5645911006918	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188896	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.36	chr11	+	5024	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-384	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.1824427303145	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTAAAAGGCAACTT	NA	False	NA	16	True	AATAAA	-12	NA	21188896	21271119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21215551_21215886_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.38	chr11	+	4393	21	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-384	54	intron_retention	FALSE	canonical	3	15	junction_3	80.3891161787465	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188896	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.39	chr11	+	3907	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-384	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.6506106675118	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188896	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214671_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.4	chr11	+	4325	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-754	752	-754	60	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTCAGTTTTTGTTTTA	NA	False	NA	8	True	AATAAA	-24	NA	21188526	21270384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.40	chr11	+	4517	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-384	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	111.184089245374	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACTTTTTTCAATGGTA	NA	False	NA	28	True	AATAAA	-24	NA	21188896	21271131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21224167_21224232_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.41	chr11	+	4081	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-383	12	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	77.7599612284364	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTAATTTAAATACTT	NA	False	NA	10	True	AATAAA	-23	NA	21188897	21270549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264956_21265027_21266791_21266887_21269752
ES.4404.42	chr11	+	6951	1	Genic_Genomic	ENSMUSG00000020128.16	novel	NA	NA	NA	NA	-380	-46380	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAAAGCATTATTTGT	NA	False	NA	NA	False	NA	NA	NA	21188900	21195851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_21188900_21195900
ES.4404.43	chr11	+	4470	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-380	54	intron_retention	FALSE	canonical	0	0	junction_1	102.695902289758	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188900	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.44	chr11	+	3792	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-380	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	102.700237794151	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188900	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21227848_21227885_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.45	chr11	+	3867	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	55	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	78.5193766977732	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188900	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.46	chr11	+	3753	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-380	900	-380	-102	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATATGGTGTCCCACCTT	NA	False	NA	NA	False	ATTAAA	-32	NA	21188900	21270222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.48	chr11	+	3621	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-380	-102	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	86.2393705040993	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATATGGTGTCCCACCTT	NA	False	NA	NA	False	ATTAAA	-32	NA	21188900	21270222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.49	chr11	+	4603	22	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	-1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_14	99.1386715186167	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188900	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258744_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.5	chr11	+	5067	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-754	10	-754	4	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGGCAACTTTTTTCAA	NA	False	NA	23	True	AATAAA	-19	NA	21188526	21271126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.50	chr11	+	3743	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-379	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	83.8293228643822	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188901	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250153_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.51	chr11	+	4533	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-379	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	85.4692794659362	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188901	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242069_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.52	chr11	+	4468	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-379	55	intron_retention	FALSE	canonical	3	201	junction_2	46.8081916198553	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188901	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.53	chr11	+	5988	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-379	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	84.9440871037196	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21188901	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21217449_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.54	chr11	+	3706	21	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-379	51	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	81.8339171737489	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTTAGGAATTCAGTT	NA	False	NA	-1	True	AATAAA	-15	NA	21188901	21270375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.55	chr11	+	3852	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-379	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.8612260229661	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTAGGAATTCAGTTT	NA	False	NA	0	True	AATAAA	-16	NA	21188901	21270376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218786_21218864_21221703_21221739_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.56	chr11	+	3990	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-379	2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	84.5645911006918	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTATGCAACTACTAAT	NA	False	NA	0	True	AATAAA	-13	NA	21188901	21270539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.57	chr11	+	4197	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-378	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	97.1251617870168	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188902	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.59	chr11	+	4595	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-377	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	78.2348789287217	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188903	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21225088_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.6	chr11	+	4268	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-737	742	-737	56	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188543	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.60	chr11	+	4569	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-373	2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	84.5645911006918	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	NA	False	NA	21	True	AATAAA	-17	NA	21188907	21271124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.61	chr11	+	4426	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-373	-7	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	91.7330050465809	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188907	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.62	chr11	+	4602	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-373	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_19	71.139223468114	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21188907	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
ES.4404.63	chr11	+	4113	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-370	98	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	83.8920991364542	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTAGCATTCTGTTTTT	NA	False	NA	96	True	ATTAAA	-17	NA	21188910	21270635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261119_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.64	chr11	+	4286	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-370	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	80.3195432316651	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188910	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.65	chr11	+	2786	15	ISM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-368	13972	-368	0	5prime_fragment	FALSE	canonical	3	201	junction_2	44.5607244472675	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGTGCTTCAACCTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	21188912	21257164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908
ES.4404.66	chr11	+	2750	15	ISM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	-368	13958	-368	0	5prime_fragment	FALSE	canonical	3	123	junction_2	59.4116133084969	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCGTGCTTCAACCTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	21188912	21257164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908
ES.4404.67	chr11	+	4656	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-367	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	77.1226349812186	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188913	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.68	chr11	+	4583	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-367	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	101.274849006663	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188913	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261119_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.69	chr11	+	3718	20	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-365	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	84.246735636308	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCAACTACTAATTTAA	NA	False	NA	4	True	AATAAA	-17	NA	21188915	21270543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256454_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.7	chr11	+	4290	24	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-721	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.439600863156	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188559	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.70	chr11	+	3926	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-365	56	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_15	77.0073652160666	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188915	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258744_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.71	chr11	+	4403	21	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-365	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	121.90056398557	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188915	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265016_21266803_21266887_21269752
ES.4404.72	chr11	+	4007	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-365	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	98.4648325617719	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188915	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21244056_21244134_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.73	chr11	+	5194	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-362	0	intron_retention	FALSE	canonical	3	201	junction_2	46.8081916198553	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188918	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.74	chr11	+	3684	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-361	54	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	78.1442355004521	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188919	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.75	chr11	+	3784	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-359	-34	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	72.9566977875652	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTTTTCTCTATGAA	NA	False	NA	-86	True	ATTAAA	-18	NA	21188921	21270290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.76	chr11	+	3906	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-356	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	99.0282224569098	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGAATTCAGTTTTT	NA	False	NA	2	True	AATAAA	-18	NA	21188924	21270378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242127_21245346_21245401_21248761_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.77	chr11	+	4521	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-356	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	94.0134068160336	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTAAAAGGCAACTT	NA	False	NA	16	True	AATAAA	-12	NA	21188924	21271119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264956_21265027_21266791_21266887_21269752
ES.4404.78	chr11	+	4774	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-356	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.787067056796	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21188924	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221386_21221502_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258744_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.8	chr11	+	4194	23	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-715	55	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_20	100.853260558542	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188565	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264956_21265027_21266791_21266887_21269752
ES.4404.80	chr11	+	4667	24	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-355	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.439600863156	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGGCAACTTTTTT	NA	False	NA	20	True	AATAAA	-16	NA	21188925	21271123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21210287_21210326_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.81	chr11	+	3698	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-354	55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.6876349236982	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188926	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189068_21189289_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.82	chr11	+	6217	20	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-354	56	intron_retention	FALSE	canonical	2	5	junction_16	102.273058003327	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188926	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261119_21261183_21262239_21265027_21266791_21266887_21269752
ES.4404.83	chr11	+	6507	21	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-353	-7	intron_retention	FALSE	canonical	2	6	junction_12	74.8729590706819	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTTAAAAGGCA	NA	False	NA	12	True	AATAAA	-8	NA	21188927	21271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250306_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21265027_21266791_21266887_21269752
ES.4404.84	chr11	+	4724	24	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-353	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_22	101.497427495872	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188927	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21265824_21265924_21266791_21266887_21269752
ES.4404.85	chr11	+	3997	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-353	1	combination_of_known_splicesites	FALSE	canonical	3	27	junction_19	71.139223468114	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTATGCAACTACTAA	NA	False	NA	-1	True	AATAAA	-12	NA	21188927	21270538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
ES.4404.88	chr11	+	3882	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-353	56	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_20	77.7599612284364	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	False	NA	4	True	AATAAA	-20	NA	21188927	21270380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264956_21265027_21266791_21266887_21269752
ES.4404.90	chr11	+	4088	24	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-345	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	98.1542129885936	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCAACTACTAATTTAA	NA	False	NA	4	True	AATAAA	-17	NA	21188935	21270543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224167_21224233_21225049_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.91	chr11	+	3729	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-345	55	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	95.5097316692776	601	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188935	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.93	chr11	+	3618	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-342	-120	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	84.5645911006918	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCAGTGCAATGAAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	21188938	21270204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.94	chr11	+	2034	7	ISM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	-342	42505	-342	-13600	5prime_fragment	FALSE	canonical	3	201	junction_2	41.9102877850084	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATAGGGCTGGAGCGA	NA	False	NA	NA	False	NA	NA	NA	21188938	21228631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674
ES.4404.95	chr11	+	3785	22	NIC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-336	55	combination_of_known_splicesites	FALSE	canonical	3	27	junction_19	77.4389379811362	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	False	NA	3	True	AATAAA	-19	NA	21188944	21270379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
ES.4404.96	chr11	+	4514	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-329	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	99.4428695157207	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAAAGGCAACTTTT	NA	False	NA	18	True	AATAAA	-14	NA	21188951	21271121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241087_21242033_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255736_21256360_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.97	chr11	+	4458	22	NNC	ENSMUSG00000020128.16	novel	4273	23	NA	NA	-329	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	95.5097316692776	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAAGGCAACTTTTTTC	NA	False	NA	21	True	AATAAA	-17	NA	21188951	21271124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ES.4404.98	chr11	+	3804	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-322	52	combination_of_known_splicesites	FALSE	canonical	3	27	junction_19	71.139223468114	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTAGGAATTCAGTTT	NA	False	NA	0	True	AATAAA	-16	NA	21188958	21270376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
ES.4404.99	chr11	+	3721	21	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-319	51	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	93.868138897072	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTTAGGAATTCAGTT	NA	False	NA	-1	True	AATAAA	-15	NA	21188961	21270375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
ES.4405.1	chr11	-	162	1	Intergenic	novelGene_3398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	21195482	21195320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21195300_21195500
ES.4406.1	chr11	-	158	1	Intergenic	novelGene_3399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	21214470	21214312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21214300_21214500
ES.4407.1	chr11	-	8001	1	Genic_Genomic	ENSMUSG00000001891.17	novel	NA	NA	NA	NA	-465	5171	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21273967	21265966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_21266000_21274000
ES.4407.10	chr11	-	1902	10	NIC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-23	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	132.418341946841	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21321224	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21272130_21273198_21273304_21279034_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.11	chr11	-	2693	9	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6803	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	187.003843543388	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21286695	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21284174_21284295_21285742
ES.4407.12	chr11	-	2192	11	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.11546627244	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21321229	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21299726_21299848_21303348_21303457_21304278_21304407_21321014
ES.4407.13	chr11	-	1884	9	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6803	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	186.793962362278	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21286695	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21284174_21284295_21286551
ES.4407.14	chr11	-	2189	11	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.11546627244	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGCTGTCTAGTGCT	NA	False	NA	-9	True	AATAAA	-19	NA	21321169	21271674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21299668_21299848_21303348_21303457_21304278_21304407_21321014
ES.4407.15	chr11	-	1785	8	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6825	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGCTGTCTAGTGCT	NA	False	NA	-9	True	AATAAA	-19	NA	21286717	21271674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
ES.4407.16	chr11	-	3516	8	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6803	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	152.420471066061	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGCTGTCTAGTGCT	NA	False	NA	-9	True	AATAAA	-19	NA	21286695	21271674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21284798
ES.4407.17	chr11	-	2242	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-366	807	358	-5	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCAGGTACTTTAT	NA	False	NA	-46	True	AATAAA	-18	NA	21320843	21271944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ES.4407.18	chr11	-	1810	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-38	272	-38	-5	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCAGGTACTTTAT	NA	False	NA	-46	True	AATAAA	-18	NA	21321239	21271944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.19	chr11	-	1429	8	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6739	-5	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCAGGTACTTTAT	NA	False	NA	-46	True	AATAAA	-18	NA	21286631	21271944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
ES.4407.2	chr11	-	2650	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-56	-550	-56	15	multi-exon	TRUE	canonical	3	305	junction_7	61.1714853284106	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTACATCTTTATT	NA	False	NA	NA	False	AATATA	-33	NA	21321257	21271122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.21	chr11	-	2218	11	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-293	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.179665833893	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAAGCAGGTACTTT	NA	False	NA	-48	True	AATAAA	-16	NA	21320770	21271946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21307220_21307272_21320186
ES.4407.22	chr11	-	3554	8	ISM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-18	5144	-18	-4877	5prime_fragment	FALSE	canonical	3	305	junction_5	57.3371696232746	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCATTGTGTCTTGATT	NA	False	NA	NA	False	ATTAAA	-20	NA	21321219	21276816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.23	chr11	-	3292	8	ISM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-18	5406	-18	-5139	5prime_fragment	FALSE	canonical	3	305	junction_5	57.3371696232746	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTAGTAGCTCCAAATCC	NA	False	NA	NA	False	NA	NA	NA	21321219	21277078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.3	chr11	-	2998	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-325	10	-325	-10	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAAAAGTTGCCTTTT	NA	False	NA	NA	False	AATATA	-8	NA	21320802	21271147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ES.4407.4	chr11	-	2149	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	-100	-5	-100	5	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTAGTGCTCACTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	21321301	21271667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.5	chr11	-	2529	10	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	137.570543071501	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGTCTAGTGCTCAC	NA	False	NA	-6	True	AATAAA	-22	NA	21321219	21271671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21283016_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ES.4407.6	chr11	-	2302	8	NNC	ENSMUSG00000001891.17	novel	2683	10	NA	NA	-6821	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	192.527125043592	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21286713	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279204_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
ES.4407.8	chr11	-	2503	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-356	536	-356	-1	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGCTGTCTAGTGCTC	NA	False	NA	-8	True	AATAAA	-20	NA	21320833	21271673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ES.4408.1	chr11	-	8096	4	NIC	ENSMUSG00000020321.17	novel	549	6	NA	NA	127	297	intron_retention	FALSE	canonical	3	1374	junction_2	38.9044413345772	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTCAGGACTTTTAT	NA	False	NA	NA	False	TTTAAA	-41	NA	21521807	21506394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.10	chr11	-	5326	7	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	120	-459	intron_retention	FALSE	canonical	3	1348	junction_1	64.5258346194246	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTCAGACTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	21521814	21507245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.11	chr11	-	1987	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	131	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	473.51768710366	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTCAGACTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	21521803	21507245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21513326_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.14	chr11	-	1087	8	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	138	-461	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	497.976722675398	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCTCTCAGACTCTG	NA	False	NA	-14	True	AATAAA	-13	NA	21521796	21507247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21508461_21508552_21509191_21509306_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.15	chr11	-	2036	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	119	-461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	473.714840383959	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCTCTCAGACTCTG	NA	False	NA	-14	True	AATAAA	-13	NA	21521815	21507247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512111_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.16	chr11	-	1247	4	ISM	ENSMUSG00000020321.17	ENSMUST00000125302.2	549	6	554	354	121	-354	internal_fragment	FALSE	canonical	3	1374	junction_2	38.9044413345772	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACACTTTAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	21521813	21513249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.17	chr11	-	1828	1	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	95	-7116	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	21521839	21520011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21520000_21521800
ES.4408.2	chr11	-	5123	8	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	121	297	intron_retention	FALSE	canonical	3	1273	junction_4	82.7171230700125	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTCAGGACTTTTAT	NA	False	NA	NA	False	TTTAAA	-41	NA	21521813	21506394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.3	chr11	-	1744	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	119	95	119	0	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGCTGTAATTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	21521815	21506786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.4	chr11	-	4281	8	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	116	-455	intron_retention	FALSE	canonical	3	1273	junction_4	82.7171230700125	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521818	21507241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.5	chr11	-	1423	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	-18	553	-18	-458	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTCAGACTCTGTTT	NA	False	NA	-11	True	AATAAA	-16	NA	21521952	21507244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.6	chr11	-	1193	8	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	121	-459	combination_of_known_splicesites	FALSE	canonical	2	35	junction_1	475.273111602418	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTCAGACTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	21521813	21507245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4408.7	chr11	-	4649	3	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	1027	-459	intron_retention	FALSE	canonical	3	1348	junction_1	53.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTCAGACTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	21513180	21507245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21507569_21508461_21509306_21509698
ES.4408.8	chr11	-	1262	9	NNC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	142	-459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	459.37675169734	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCTCAGACTCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	21521792	21507245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21507569_21508461_21508546_21509185_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ES.4409.1	chr11	+	7023	9	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-231	197784	-231	3637	5prime_fragment	FALSE	canonical	2	7	junction_1	1.65359456941537	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAAATGCTACTATAT	NA	False	NA	NA	False	AATACA	-8	NA	21522003	21651205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113
ES.4409.2	chr11	+	2395	13	NIC	ENSMUSG00000020319.10	novel	2792	18	NA	NA	-231	-313	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.26716769768683	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTTCATAATGTGTA	NA	False	NA	NA	False	AATAAA	-12	NA	21522003	21848676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_21522371_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ES.4409.3	chr11	+	2705	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	-222	309	-222	-309	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATAATGTGTATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	21522012	21848680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ES.4409.4	chr11	+	4566	2	NNC	ENSMUSG00000020319.10	novel	505	7	NA	NA	-22	-87417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGGTGGTGGTCTGA	NA	False	NA	NA	False	NA	NA	NA	21522282	21526968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21524469_21524588
ES.4409.5	chr11	+	3758	11	ISM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	58	175573	-12	11506	5prime_fragment	FALSE	canonical	2	7	junction_1	2.5377155080899	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAAGCCTGCAGCAATT	NA	False	NA	NA	False	AATAAA	-19	NA	21522292	21673416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102
ES.4409.6	chr11	+	3663	14	NNC	ENSMUSG00000020319.10	novel	963	4	NA	NA	28840	1606	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	4.68157663221629	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGACGAAGT	NA	False	NA	NA	False	NA	NA	NA	21551144	21700956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_21551261_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21699152
ES.441.1	chr1	+	3290	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	-5	476	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.09663853432741	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGGGGCCAGCTTTCT	3258	False	NA	NA	False	AATAAA	-18	NA	52158608	52199195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.10	chr1	+	4137	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	0	-82	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.09663853432741	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTATGAGTTGGTTTAA	3300	False	NA	NA	False	TATAAA	-17	NA	52158650	52200084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.11	chr1	+	4169	24	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	0	476	intron_retention	FALSE	canonical	3	8	junction_2	8.08578766681494	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGGGGCCAGCTTTCT	3300	False	NA	NA	False	AATAAA	-18	NA	52158650	52199195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52195242_52198441
ES.441.12	chr1	+	4676	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	2	-91	intron_retention	FALSE	canonical	0	0	junction_23	8.92678553567856	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTAGTGTTATGAG	3359	False	NA	NA	False	TATAAA	-8	NA	52158709	52200075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194791_52195141_52195242_52198441
ES.441.13	chr1	+	1374	11	ISM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	136	14618	4	2942	5prime_fragment	FALSE	canonical	3	29	junction_8	4.52216762183801	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACATCTAGCCCTTTCA	3384	False	NA	NA	False	NA	NA	NA	52158734	52179953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735
ES.441.14	chr1	+	2779	23	NIC	ENSMUSG00000026104.15	novel	3998	25	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.083637838901	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATGAGTGGGAAAGCAG	3436	False	NA	NA	False	AATAAA	-16	NA	52158786	52194571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158953_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ES.441.15	chr1	+	4198	25	NIC	ENSMUSG00000026104.15	novel	3998	25	NA	NA	11	-85	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.85757287422588	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTTATGAGTTGGTT	3443	False	NA	NA	False	TATAAA	-14	NA	52158793	52200081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158953_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.16	chr1	+	3159	24	ISM	ENSMUSG00000026104.15	ENSMUST00000186857.7	4241	25	417	968	285	479	3prime_fragment	FALSE	canonical	3	19	junction_11	6.85827360377206	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCCAGCTTTCTTAA	3717	False	NA	NA	False	AATAAA	-21	NA	52159067	52199198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.17	chr1	+	2649	11	ISM	ENSMUSG00000026104.15	ENSMUST00000186857.7	4241	25	25657	91	-4955	-91	3prime_fragment	FALSE	canonical	3	20	junction_1	6.86731388535576	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTAGTGTTATGAG	6930	False	NA	NA	False	TATAAA	-8	NA	52184307	52200075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.18	chr1	+	3263	5	NIC	ENSMUSG00000026104.15	novel	3298	8	NA	NA	383	477	intron_retention	FALSE	canonical	3	28	junction_4	5.06828373317832	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGGGCCAGCTTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	52189799	52199196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52189828_52190396_52190492_52191391_52191538_52193002_52195242_52198441
ES.441.19	chr1	+	1713	1	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	6951	-91	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTAGTGTTATGAG	NA	False	NA	NA	False	TATAAA	-8	NA	52198362	52200075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52198400_52200100
ES.441.2	chr1	+	2823	23	FSM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	11	0	-4	0	multi-exon	FALSE	canonical	3	19	junction_12	6.78598458418965	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATGAGTGGGAAAGCAG	3259	False	NA	NA	False	AATAAA	-16	NA	52158609	52194571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ES.441.3	chr1	+	4189	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	21	941	-14	-83	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTATGAGTTGGTTTA	3284	False	NA	NA	False	TATAAA	-16	NA	52158634	52200083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.4	chr1	+	4136	25	NIC	ENSMUSG00000026104.15	novel	4241	25	NA	NA	-13	-83	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.12414379544733	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTATGAGTTGGTTTA	3285	False	NA	NA	False	TATAAA	-16	NA	52158635	52200083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158768_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.6	chr1	+	4171	25	FSM	ENSMUSG00000026104.15	ENSMUST00000186857.7	4241	25	-8	78	-6	-78	multi-exon	FALSE	canonical	3	7	junction_1	8.12649558884736	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAGTTGGTTTAATATA	3292	False	NA	NA	False	TATAAA	-21	NA	52158642	52200088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52158768_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.7	chr1	+	3292	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	30	1829	-5	476	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGGGGCCAGCTTTCT	3293	False	NA	NA	False	AATAAA	-18	NA	52158643	52199195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ES.441.8	chr1	+	2694	23	NIC	ENSMUSG00000026104.15	novel	2803	23	NA	NA	0	-38	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.40689478103628	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCATGAAT	3298	False	NA	NA	False	NA	NA	NA	52158648	52194533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158768_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ES.441.9	chr1	+	2746	23	NIC	ENSMUSG00000026104.15	novel	2834	23	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.26085561774264	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATGAGTGGGAAAGCAG	3299	False	NA	NA	False	AATAAA	-16	NA	52158649	52194571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ES.4410.1	chr11	-	1508	1	Intergenic	novelGene_3401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21606258	21604750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21604800_21606300
ES.4411.1	chr11	-	134	1	Intergenic	novelGene_3402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	21632527	21632393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_21632400_21632500
ES.4412.1	chr11	-	2815	5	FSM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	-38	12	-38	-7	multi-exon	FALSE	canonical	2	4	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTGTCAGCGTTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	21951653	21944775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121_21951190_21951547
ES.4413.1	chr11	+	3111	1	Intergenic	novelGene_3403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGTCTGCACTTGCA	NA	False	NA	NA	False	NA	NA	NA	21994949	21998060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_21994900_21998100
ES.4414.1	chr11	-	4717	23	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-262	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	8.91233707094361	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9630	False	NA	0	True	AATAAA	-24	NA	22237057	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.10	chr11	-	5058	23	NIC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-225	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_15	8.44733318962434	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9667	False	NA	-3	True	AATAAA	-21	NA	22237020	21955827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22236681
ES.4414.11	chr11	-	6429	2	ISM	ENSMUSG00000042302.15	ENSMUST00000045167.11	4821	24	273371	0	158943	0	3prime_fragment	FALSE	canonical	3	41	junction_1	0	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	NA	False	NA	-3	True	AATAAA	-21	NA	21962467	21955827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_21956872_21957082
ES.4414.12	chr11	-	4705	24	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	9.9822148081661	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9669	False	NA	-3	True	AATAAA	-21	NA	22237018	21955827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22101787_22101893_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.13	chr11	-	4875	25	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_18	9.57418041168828	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9667	False	NA	-3	True	AATAAA	-21	NA	22237020	21955827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22101787_22101893_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.15	chr11	-	4205	21	NNC	ENSMUSG00000042302.15	novel	4821	24	NA	NA	37811	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	8.71478628538876	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTGCTGCAATTTAT	NA	False	NA	-4	True	AATAAA	-20	NA	22198027	21955828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969
ES.4414.16	chr11	-	4774	23	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-254	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	7.80813307703963	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTGCTGCAATTTAT	9638	False	NA	-4	True	AATAAA	-20	NA	22237049	21955828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.17	chr11	-	4750	23	NIC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	6	junction_17	8.99873728515689	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCTGCTGCAATTTAT	NA	False	NA	-4	True	AATAAA	-20	NA	22235876	21955828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22101787_22101893_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ES.4414.18	chr11	-	4732	24	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-254	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	10.3277115426838	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTGCTGCAATTTA	9638	False	NA	-5	True	AATAAA	-19	NA	22237049	21955829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237016
ES.4414.19	chr11	-	5123	24	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-250	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_23	8.84309776446205	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTGCTGCAATTTA	9642	False	NA	-5	True	AATAAA	-19	NA	22237045	21955829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22236681
ES.4414.2	chr11	-	4819	24	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-262	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	7.95355135810722	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9630	False	NA	0	True	AATAAA	-24	NA	22237057	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.20	chr11	-	4629	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-268	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	9.36407765950407	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTGCTGCAATTTA	9624	False	NA	-5	True	AATAAA	-19	NA	22237063	21955829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237016
ES.4414.21	chr11	-	4783	24	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-248	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_23	10.1433953294286	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCCTGCTGCAATTTA	9644	False	NA	-5	True	AATAAA	-19	NA	22237043	21955829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22101787_22101893_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237016
ES.4414.23	chr11	-	4294	21	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-4	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	10.1291658096805	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTAAATATCCCATTAC	NA	False	NA	NA	False	GATAAA	-17	NA	22235876	21955954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088002_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ES.4414.24	chr11	-	3038	14	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-245	21076	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	6.95462895525889	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCACTTATGTCTTATG	9647	False	NA	NA	False	TATAAA	-10	NA	22237040	22039276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.25	chr11	-	2464	9	NIC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-201	1015	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	7.3824115301167	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGGTATTTAGATGT	9691	False	NA	NA	False	NA	NA	NA	22236996	22095516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22236681
ES.4414.26	chr11	-	5620	5	NNC	ENSMUSG00000042302.15	novel	460	5	NA	NA	-4	-29741	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.6959639255946	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTTTTTTTATTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	22235876	22148777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22153801_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ES.4414.27	chr11	-	2373	5	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-290	1695	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1.92028643696715	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTCTTATCATGTAGC	9602	False	NA	NA	False	ATTAAA	-17	NA	22237085	22180306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.28	chr11	-	2646	3	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-262	-13795	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCAGTCTTGAACATATC	9630	False	NA	NA	False	NA	NA	NA	22237057	22195796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22198028_22235487_22235875_22237029
ES.4414.3	chr11	-	4678	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-229	3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	6.6296666084233	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9663	False	NA	0	True	AATAAA	-24	NA	22237024	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.4	chr11	-	4356	1	Genic_Genomic	ENSMUSG00000042302.15	novel	NA	NA	NA	NA	161230	3	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	NA	False	NA	0	True	AATAAA	-24	NA	21960180	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_21955800_21960200
ES.4414.5	chr11	-	4709	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-269	3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	6.15250402560811	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9623	False	NA	0	True	AATAAA	-24	NA	22237064	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.6	chr11	-	4703	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	10.4344668849709	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	NA	False	NA	0	True	AATAAA	-24	NA	22235876	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039584_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22101787_22101893_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ES.4414.7	chr11	-	4757	23	NIC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	7.78653743901975	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	NA	False	NA	0	True	AATAAA	-24	NA	22235876	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ES.4414.8	chr11	-	4873	24	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-250	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	8.5081968705865	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9642	False	NA	0	True	AATAAA	-24	NA	22237045	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22012779_22012888_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
ES.4414.9	chr11	-	4991	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-221	3	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_22	7.83718620445538	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGCAATTTATTTCC	9671	False	NA	0	True	AATAAA	-24	NA	22237016	21955824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22236681
ES.4415.1	chr11	-	5045	1	Intergenic	novelGene_3404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGTCTGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	22290322	22285277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22285300_22290300
ES.4416.1	chr11	+	1393	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	176	-1	176	1	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTATCTGTGTAGTTCT	NA	False	NA	8	True	ATTAAA	-17	NA	22462263	22469235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ES.4416.2	chr11	+	1169	4	NNC	ENSMUSG00000049904.8	novel	1568	4	NA	NA	184	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	27.8846831711525	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCATGCTTATCTGT	NA	False	NA	0	True	ATTAAA	-9	NA	22462271	22469227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22462376_22467187_22467292_22467407_22467522_22468380
ES.4416.3	chr11	+	180	1	Intergenic	novelGene_3405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAAAAAATTCTTGC	NA	False	NA	NA	False	NA	NA	NA	22464717	22464897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22464700_22464900
ES.4417.1	chr11	-	149	1	Intergenic	novelGene_3406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	22466026	22465877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22465900_22466000
ES.4418.1	chr11	+	202	1	Intergenic	novelGene_3408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	22484193	22484395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22484200_22484400
ES.4419.1	chr11	+	1066	1	Intergenic	novelGene_3411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACCTTCCATCTTCC	NA	False	NA	NA	False	NA	NA	NA	22558037	22559103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22558000_22559100
ES.442.1	chr1	-	158	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	52201550	52201392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52201400_52201600
ES.4420.1	chr11	-	1019	4	Intergenic	novelGene_3407	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.88561808316413	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTCTTGGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	22560410	22470290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22470427_22470891_22471505_22471957_22472035_22560217
ES.4420.2	chr11	-	690	2	Intergenic	novelGene_3409	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22560633	22550332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22550607_22560217
ES.4420.3	chr11	-	905	2	Intergenic	novelGene_3410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATTGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	22560618	22550334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22550839_22560217
ES.4421.1	chr11	+	1089	2	NNC	ENSMUSG00000086256.2	novel	933	2	NA	NA	-504	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTGAGTTTGTAGCTT	NA	False	NA	NA	False	NA	NA	NA	22566903	22568487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22567831_22568325
ES.4422.1	chr11	-	4793	1	Antisense	novelGene_ENSMUSG00000086256.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTACTTTCGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	22571027	22566234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_22566200_22571000
ES.4423.1	chr11	-	173	1	Intergenic	novelGene_3412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAGAAGGAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	22726568	22726395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22726400_22726600
ES.4424.1	chr11	+	3804	2	Antisense	novelGene_ENSMUSG00000082576.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGATGTGTCTTAGTTA	NA	False	NA	NA	False	GATAAA	-23	NA	22732970	22739642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_22733085_22735952
ES.4424.2	chr11	+	4604	2	Antisense	novelGene_ENSMUSG00000082576.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGAGTCCAGGGTAT	NA	False	NA	NA	False	NA	NA	NA	22732975	22740447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_22733085_22735952
ES.4425.1	chr11	+	176	1	Intergenic	novelGene_3413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	22790485	22790661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22790500_22790700
ES.4426.1	chr11	-	1925	5	NNC	ENSMUSG00000051650.12	novel	882	6	NA	NA	-196	35443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.563989579653	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGCTCTCTGTCGAGTT	4329	False	NA	NA	False	NA	NA	NA	22809741	22749303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22749425_22750352_22750445_22750910_22751103_22785923_22787196_22809493
ES.4426.10	chr11	-	2715	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-110	-3	-110	3	multi-exon	FALSE	canonical	3	85	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAGTATCTTGTAACAT	3472	False	NA	-15	True	AATAAA	-21	NA	22810598	22784861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22810217
ES.4426.11	chr11	-	2606	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	334	117	-222	1	multi-exon	FALSE	canonical	3	288	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTAGTATCTTGTAAC	4303	False	NA	-17	True	AATAAA	-19	NA	22809767	22784863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22809493
ES.4426.13	chr11	-	2441	2	NNC	ENSMUSG00000051650.12	novel	3057	2	NA	NA	-196	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTAGTATCTTGTAAC	3386	False	NA	-17	True	AATAAA	-19	NA	22810684	22784863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22787196_22810575
ES.4426.14	chr11	-	2571	2	NNC	ENSMUSG00000051650.12	novel	2602	2	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTAGTATCTTGTAAC	3610	False	NA	-17	True	AATAAA	-19	NA	22810460	22784863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22787187_22810212
ES.4426.15	chr11	-	2966	2	NNC	ENSMUSG00000051650.12	novel	3057	2	NA	NA	104	-1	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATACTAGTATCTTGTA	4629	False	NA	-19	True	AATAAA	-17	NA	22809441	22784865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22787196_22808805
ES.4426.2	chr11	-	4407	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	365	-1715	-191	1715	multi-exon	FALSE	canonical	3	288	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTTGGGTGTTTTTGT	4334	False	NA	NA	False	NA	NA	NA	22809736	22783031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22809493
ES.4426.3	chr11	-	4359	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-159	-1598	-159	1480	multi-exon	FALSE	canonical	3	85	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACGTCTTAAGTTTTTGT	3423	False	NA	NA	False	NA	NA	NA	22810647	22783266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22810217
ES.4426.4	chr11	-	4170	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	365	-1478	-191	1478	multi-exon	FALSE	canonical	3	288	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACGTCTTAAGTTTTT	4334	False	NA	NA	False	NA	NA	NA	22809736	22783268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22809493
ES.4426.5	chr11	-	3546	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	388	-877	-168	877	multi-exon	FALSE	canonical	3	288	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGGTTTTTTTAATTTG	4357	False	NA	NA	False	AAGAAA	-17	NA	22809713	22783869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22809493
ES.4426.6	chr11	-	2708	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	357	-8	-199	8	multi-exon	FALSE	canonical	3	288	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGATACTCTTTCTG	4326	False	NA	-20	True	AATAAA	-29	NA	22809744	22784738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22809493
ES.4426.7	chr11	-	2838	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	-110	-126	-110	8	multi-exon	FALSE	canonical	3	85	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTGATACTCTTTCTG	3472	False	NA	-20	True	AATAAA	-29	NA	22810598	22784738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22787196_22810217
ES.4426.8	chr11	-	2359	2	NNC	ENSMUSG00000051650.12	novel	3057	2	NA	NA	22379	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAAGTGATACTCTTTC	NA	False	NA	-22	True	AATAAA	-27	NA	22787166	22784740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22786107_22786173
ES.4426.9	chr11	-	2682	2	NNC	ENSMUSG00000051650.12	novel	3057	2	NA	NA	217	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATCACGTATAATAAGT	4742	False	NA	-33	True	AATAAA	-16	NA	22809328	22784751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22787196_22809090
ES.4427.1	chr11	+	169	1	Intergenic	novelGene_3416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22908058	22908227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22908100_22908200
ES.4428.1	chr11	+	2918	1	FSM	ENSMUSG00000044068.8	ENSMUST00000049506.8	4492	1	-14	1588	-14	394	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTGTCTGAATCTGT	NA	False	NA	10	True	AATATA	-16	NA	22921990	22924908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22922000_22924900
ES.4429.1	chr11	-	4985	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	110	-587	-20	587	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTATGTATGGAGTAA	NA	False	NA	NA	False	NA	NA	NA	22932272	22845548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22850058_22906410_22906693_22932078
ES.4429.2	chr11	-	839	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	77	3592	-53	31	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGCTTGTCTCTGCTT	NA	False	NA	0	True	AATATA	-41	NA	22932305	22849727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_22850058_22906410_22906693_22932078
ES.4429.3	chr11	-	896	4	NNC	ENSMUSG00000051355.19	novel	4508	3	NA	NA	-30	31	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1024.12705374979	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGCTTGTCTCTGCTT	NA	False	NA	0	True	AATATA	-41	NA	22932282	22849727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22850058_22906152_22906233_22906410_22906693_22932078
ES.4429.4	chr11	-	715	3	NNC	ENSMUSG00000051355.19	novel	4508	3	NA	NA	959	6	at_least_one_novel_splicesite	FALSE	canonical	2	95	junction_2	997	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAACCTCTCAA	NA	False	NA	-25	True	AATATA	-16	NA	22921900	22849752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22850058_22906410_22906693_22921772
ES.4429.5	chr11	-	863	4	NNC	ENSMUSG00000051355.19	novel	1459	4	NA	NA	-6	6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	982.642808394225	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAACCTCTCAA	NA	False	NA	-25	True	AATATA	-16	NA	22932258	22849752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_22850058_22906410_22906693_22923899_22923996_22932078
ES.4429.6	chr11	-	161	1	Intergenic	novelGene_3414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	22887679	22887518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22887500_22887700
ES.4429.7	chr11	-	2089	1	Intergenic	novelGene_3415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTATCAGTCCTGGT	NA	False	NA	NA	False	NA	NA	NA	22891293	22889204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22889200_22891300
ES.4429.8	chr11	-	172	1	Intergenic	novelGene_3417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGATGTC	NA	False	NA	NA	False	NA	NA	NA	22915925	22915753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_22915800_22915900
ES.443.1	chr1	-	5015	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	-38	-11	-29	11	multi-exon	FALSE	canonical	3	13	junction_3	80.7225587298202	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTTTTAATAAC	NA	False	NA	NA	False	AATAAA	-32	NA	52272420	52202595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.10	chr1	-	4536	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	74.8027331645635	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272381	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239683_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.11	chr1	-	4516	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272429	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.12	chr1	-	6381	7	ISM	ENSMUSG00000026103.15	ENSMUST00000114512.8	2042	18	30038	19340	-1776	-1	internal_fragment	FALSE	canonical	3	200	junction_3	13.9214063785077	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52241417	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ES.443.14	chr1	-	4095	17	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-116	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	91.432950160213	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52271571	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271536
ES.443.15	chr1	-	4274	15	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	154	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	66.4290322564661	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272228	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235393_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.16	chr1	-	4245	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-154	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	78.6160854335096	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272124	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.17	chr1	-	4220	17	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-112	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	84.8852166163225	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52271567	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271330
ES.443.18	chr1	-	4625	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-35	-1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	72.0864912603063	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272426	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.19	chr1	-	8281	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	28	-1	intron_retention	FALSE	canonical	3	19	junction_9	71.1962545831357	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTGTTTTTTTTAAT	NA	False	NA	-1	True	AATAAA	-15	NA	52272354	52224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.2	chr1	-	5158	20	NNC	ENSMUSG00000026103.15	novel	4966	18	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	88.5183987948706	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAGAAAAAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	52272354	52202607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52240328_52240379_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.20	chr1	-	4442	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	72.2236034055965	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272381	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.21	chr1	-	4463	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	79.6320426852295	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272327	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52240328_52240379_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.22	chr1	-	4338	17	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	79.007021048765	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272383	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750_52271967_52272209
ES.443.24	chr1	-	5397	15	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-2	intron_retention	FALSE	canonical	1	2	junction_11	78.4215778823088	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272375	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271750
ES.443.25	chr1	-	4607	17	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	77.8455752997561	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52272375	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.26	chr1	-	4093	15	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-132	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	75.3500673726389	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGTTTTTTTTAA	NA	False	NA	-2	True	AATAAA	-14	NA	52271587	52224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271330
ES.443.27	chr1	-	4552	17	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	85.9136330494177	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272381	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271750
ES.443.28	chr1	-	5483	1	NIC	ENSMUSG00000026103.15	novel	4966	18	NA	NA	144	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	3296	False	NA	-3	True	AATAAA	-13	NA	52229924	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52224400_52229900
ES.443.29	chr1	-	4590	18	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	72	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	91.0642573238135	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272310	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52240328_52240379_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271750
ES.443.3	chr1	-	5390	13	NIC	ENSMUSG00000026103.15	novel	4966	18	NA	NA	-5543	-6	combination_of_known_junctions	FALSE	canonical	1	4	junction_12	106.351618072631	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACTATGAGAAAAAGTG	NA	False	NA	NA	False	AATAAA	-15	NA	52245184	52202612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52243504
ES.443.30	chr1	-	4271	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-164	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	76.0985910221441	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272134	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271750
ES.443.31	chr1	-	4494	14	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-24	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	77.6486549108705	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272415	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.32	chr1	-	9073	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	19	junction_8	63.7892336255156	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272418	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.33	chr1	-	5293	14	ISM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	-1	21835	-1	-3	5prime_fragment	FALSE	canonical	3	106	junction_7	54.6916044529061	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272383	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.34	chr1	-	4463	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	28	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	87.4763206054454	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272354	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52259101_52259199_52271750
ES.443.35	chr1	-	5938	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-18	-3	intron_retention	FALSE	canonical	1	9	junction_8	72.6091515505373	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272409	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52240379_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.36	chr1	-	8395	9	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-5406	-3	intron_retention	FALSE	canonical	3	20	junction_8	68.7459089691888	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52245047	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776
ES.443.37	chr1	-	5003	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_9	71.1962545831357	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272375	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52240379_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.38	chr1	-	4718	18	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.6290785910138	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTGTTTTTTTTA	NA	False	NA	-3	True	AATAAA	-13	NA	52272378	52224441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52240328_52240379_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.39	chr1	-	4721	18	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	88.3594812336256	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTTTATTGTTTTTTT	NA	False	NA	-5	True	AATAAA	-11	NA	52272381	52224443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52256346_52256458_52258646_52258769_52259101_52259199_52271750
ES.443.4	chr1	-	2797	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	5	2164	5	329	multi-exon	FALSE	canonical	3	13	junction_3	80.7225587298202	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCCGATTCTGATTAG	NA	False	NA	NA	False	ATTAAA	-22	NA	52272377	52204770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.40	chr1	-	4659	18	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.3192368004274	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGATTTTATTGTTTTTT	NA	False	NA	-6	True	AATAAA	-10	NA	52272381	52224444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52240328_52240379_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.41	chr1	-	4065	16	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	5	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	66.1582614308716	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGATTTTATTGTTTTT	NA	False	NA	-7	True	AATAAA	-9	NA	52272377	52224445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750_52271969_52272302
ES.443.42	chr1	-	4150	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	-313	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTATTGTTGGGTTTAA	NA	False	NA	-6	True	AATAAA	-16	NA	52272375	52224751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.43	chr1	-	8704	8	ISM	ENSMUSG00000026103.15	ENSMUST00000155587.8	3252	10	6491	313	-5236	-313	3prime_fragment	FALSE	canonical	3	24	junction_1	71.7933542487445	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTATTGTTGGGTTTAA	NA	False	NA	-6	True	AATAAA	-16	NA	52244877	52224751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ES.443.44	chr1	-	4136	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-4	-313	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	72.2236034055965	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTATTGTTGGGTTTAA	NA	False	NA	-6	True	AATAAA	-16	NA	52272386	52224751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.45	chr1	-	10531	10	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-26	-314	intron_retention	FALSE	canonical	3	113	junction_9	42.6712960451501	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTATTGTTGGGTTTA	NA	False	NA	-7	True	AATAAA	-15	NA	52253718	52224752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52246519_52251361_52251526_52253636
ES.443.46	chr1	-	4098	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	8	1490	-1	-314	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTATTGTTGGGTTTA	NA	False	NA	-7	True	AATAAA	-15	NA	52272383	52224752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.47	chr1	-	5286	5	ISM	ENSMUSG00000026103.15	ENSMUST00000155587.8	3252	10	13420	315	-1415	-315	intron_retention	FALSE	canonical	3	24	junction_1	88.9058490764247	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTATTGTTGGGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	52237948	52224753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323
ES.443.49	chr1	-	1751	1	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	2511	1035	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCTGTTTATTTTTA	5663	False	NA	NA	False	AATATA	-45	NA	52227557	52225806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52225800_52227600
ES.443.5	chr1	-	9306	8	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	27166	1176	-5584	0	3prime_fragment	FALSE	canonical	3	177	junction_1	21.4037952003749	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52245225	52224438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ES.443.50	chr1	-	3040	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	11	2545	2	1034	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTCTGTTTATTTTT	NA	False	NA	NA	False	AATATA	-44	NA	52272380	52225807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.51	chr1	-	3094	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	1034	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTCTGTTTATTTTT	NA	False	NA	NA	False	AATATA	-44	NA	52272375	52225807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.52	chr1	-	3143	18	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	154	1034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.3192368004274	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTTCTGTTTATTTTT	NA	False	NA	NA	False	AATATA	-44	NA	52272228	52225807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52240328_52240379_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.53	chr1	-	3374	8	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	31047	3227	-1703	352	3prime_fragment	FALSE	canonical	3	177	junction_1	21.4037952003749	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAACCACATTGTTTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	52241344	52226489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ES.443.54	chr1	-	2416	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	1	350	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAACCACATTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52272381	52226491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.55	chr1	-	2347	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	16	3233	7	346	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTGGTAACCACATTG	NA	False	NA	NA	False	ATTAAA	-12	NA	52272375	52226495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.57	chr1	-	2529	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	7	298	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	78.4988039540872	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAAAATGCAATT	NA	False	NA	NA	False	AATAAA	-25	NA	52272375	52226543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.58	chr1	-	4148	9	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-3285	274	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	68.7459089691888	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATTTGCTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	52242926	52226567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776
ES.443.6	chr1	-	4469	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	-49	1176	-49	0	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272440	52224438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.60	chr1	-	9518	14	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	143	181	intron_retention	FALSE	canonical	3	24	junction_1	65.2499971661112	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGTTCTGTTTTGG	NA	False	NA	NA	False	CATAAA	-4	NA	52272239	52226660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.61	chr1	-	1750	10	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	-32	12373	-32	1	5prime_fragment	FALSE	canonical	3	106	junction_3	47.2003871086867	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTTTAAGATTCTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	52272423	52235635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.62	chr1	-	1569	10	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	-56	12578	-56	-204	5prime_fragment	FALSE	canonical	3	106	junction_3	47.2003871086867	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGCCTTTAATTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	52272447	52235840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.63	chr1	-	5691	8	NIC	ENSMUSG00000026103.15	novel	680	5	NA	NA	1	-3631	intron_retention	FALSE	canonical	3	19	junction_1	37.7359245282264	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATATTCCCTTTGT	NA	False	NA	NA	False	AGTAAA	-10	NA	52272381	52239267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ES.443.64	chr1	-	3267	3	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	11	32966	2	-2552	5prime_fragment	FALSE	canonical	3	106	junction_2	12.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTAGTTTTGCTTATTT	NA	False	NA	NA	False	TATAAA	-16	NA	52272380	52256228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52258769_52259101_52259199_52271750
ES.443.65	chr1	-	3109	3	ISM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	-20	33155	-20	-2741	5prime_fragment	FALSE	canonical	3	106	junction_2	12.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTACTATTTGAACATCC	NA	False	NA	NA	False	ATTAAA	-17	NA	52272411	52256417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52258769_52259101_52259199_52271750
ES.443.66	chr1	-	2833	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAATCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52268523	52265690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52265700_52268500
ES.443.7	chr1	-	5104	8	ISM	ENSMUSG00000026103.15	ENSMUST00000155587.8	3252	10	10404	0	-1323	0	3prime_fragment	FALSE	canonical	3	24	junction_1	71.7933542487445	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52240964	52224438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ES.443.8	chr1	-	4063	15	NNC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	-159	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	66.7881588551841	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52271614	52224438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271330
ES.4430.1	chr11	+	2262	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	-184	406	-184	223	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGGAGAAACTGCCTAT	NA	False	NA	57	True	TTTAAA	-43	NA	22940334	22953374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.15	chr11	+	2340	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	185	intron_retention	FALSE	canonical	3	4673	junction_2	347.321446933529	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940625	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.16	chr11	+	1807	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1428.496283907	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAACTTGTCATTTTA	NA	False	NA	18	True	ATTAAA	-18	NA	22940625	22953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946382_22947081_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.17	chr11	+	2407	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	183	intron_retention	FALSE	canonical	3	4673	junction_2	336.499587254163	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTAACTTGTCATTTT	NA	False	NA	17	True	ATTAAA	-17	NA	22940625	22953334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.18	chr11	+	4916	12	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	186	intron_retention	FALSE	canonical	3	4673	junction_2	350.650422797784	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940625	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.19	chr11	+	3619	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	186	intron_retention	FALSE	canonical	3	4673	junction_2	346.489087129739	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940625	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.2	chr11	+	3326	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	58	-900	-49	900	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGCCTGCACAGTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	22940576	22954680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.20	chr11	+	2073	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	107	304	0	-304	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGGTTGTTTGGTTTG	NA	False	NA	3	True	NA	NA	NA	22940625	22953476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.21	chr11	+	5798	10	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	185	intron_retention	FALSE	canonical	3	4673	junction_2	363.444631271395	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940625	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.24	chr11	+	3219	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-2	185	intron_retention	FALSE	canonical	3	4673	junction_2	340.698170020849	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940636	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.25	chr11	+	2899	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-2	184	intron_retention	FALSE	canonical	3	4898	junction_2	312.213557610101	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAACTTGTCATTTTA	NA	False	NA	18	True	ATTAAA	-18	NA	22940636	22953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.26	chr11	+	4761	9	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1	185	intron_retention	FALSE	canonical	3	4673	junction_2	391.16141169599	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940639	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22947155_22947602_22949173_22950857_22952402_22952816_22952931_22953136
ES.4430.29	chr11	+	3693	12	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1	186	intron_retention	FALSE	canonical	3	4673	junction_2	340.771851163582	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940639	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22949173_22950857_22950955_22951361_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.31	chr11	+	6608	8	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1	186	intron_retention	FALSE	canonical	3	4673	junction_2	403.399432375427	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940639	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.32	chr11	+	4096	11	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	3	185	intron_retention	FALSE	canonical	3	4673	junction_2	374.631672446418	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940641	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.33	chr11	+	2553	1	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	-1194	mono-exon	FALSE	NA	NA	NA	NA	NA	1383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACACTTTGCTTT	NA	False	NA	NA	False	NA	NA	NA	22940642	22943195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940600_22943200
ES.4430.35	chr11	+	1905	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1435.14767604975	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940642	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22944377_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.36	chr11	+	4899	10	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	185	intron_retention	FALSE	canonical	3	4673	junction_2	365.79958082717	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940642	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22951473_22951559_22952931_22953136
ES.4430.37	chr11	+	4484	11	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	185	intron_retention	FALSE	canonical	3	4673	junction_2	355.995449409118	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940642	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.38	chr11	+	1825	13	FSM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	-7	-184	4	184	multi-exon	FALSE	canonical	2	25	junction_2	1486.11417938416	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAACTTGTCATTTTA	NA	False	NA	18	True	ATTAAA	-18	NA	22940642	22953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.39	chr11	+	4008	12	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	185	intron_retention	FALSE	canonical	3	4673	junction_2	357.21422144142	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940642	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.41	chr11	+	4740	11	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	184	intron_retention	FALSE	canonical	1	41	junction_8	2065.71935170294	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAACTTGTCATTTTA	NA	False	NA	18	True	ATTAAA	-18	NA	22940642	22953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22947032_22947155_22947602_22950955_22951361_22951473_22951559_22951691_22952180_22952402_22952816_22952931_22953136
ES.4430.42	chr11	+	6357	9	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	4	186	intron_retention	FALSE	canonical	3	4673	junction_2	383.000571148399	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940642	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22947155_22947602_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.44	chr11	+	5454	10	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-3	185	intron_retention	FALSE	non_canonical	0	0	junction_3	1678.13537028085	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940646	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22945038_22945692_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22952402_22952816_22952931_22953136
ES.4430.45	chr11	+	2365	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	128	-9	-3	9	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGGTCTTTAATTTCC	NA	False	NA	NA	False	NA	NA	NA	22940646	22953789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.46	chr11	+	4071	12	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-3	183	intron_retention	FALSE	canonical	3	4673	junction_2	342.758619256147	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTAACTTGTCATTTT	NA	False	NA	17	True	ATTAAA	-17	NA	22940646	22953334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22950955_22951361_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.47	chr11	+	1878	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-3	185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1904.90281787868	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940646	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950950_22951361_22951473_22951559_22951691_22952195_22952402_22952816_22952931_22953136
ES.4430.48	chr11	+	8672	4	NNC	ENSMUSG00000007739.11	novel	581	5	NA	NA	-3	186	intron_retention	FALSE	non_canonical	0	0	junction_3	2298.73477277296	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940646	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22945038_22945692
ES.4430.5	chr11	+	4877	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	75	-2468	-32	2468	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAATCTACAAGATCC	NA	False	NA	29	True	AATAAA	-30	NA	22940593	22956248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.51	chr11	+	5273	12	NIC	ENSMUSG00000007739.11	novel	1634	13	NA	NA	0	185	intron_retention	FALSE	canonical	3	4898	junction_1	319.525009044611	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940649	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.52	chr11	+	1794	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1	185	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	1442.04608446548	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22940650	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22953136
ES.4430.53	chr11	+	7160	6	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	1	186	intron_retention	FALSE	canonical	3	4673	junction_2	452.658546809844	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940650	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22952402_22952816_22952931_22953136
ES.4430.55	chr11	+	5736	9	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-1981	186	intron_retention	FALSE	non_canonical	0	0	junction_1	1785.01559867134	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22943642	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22945038_22945692_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22951473_22951559_22952402_22952816_22952931_22953136
ES.4430.56	chr11	+	1427	10	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	5663	-184	689	184	3prime_fragment	FALSE	canonical	3	4905	junction_2	323.54681764758	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTAACTTGTCATTTTA	NA	False	NA	18	True	ATTAAA	-18	NA	22946312	22953335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.57	chr11	+	5610	5	NIC	ENSMUSG00000007739.11	novel	1634	13	NA	NA	785	183	intron_retention	FALSE	canonical	3	4905	junction_2	386.876837636993	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTAACTTGTCATTTT	NA	False	NA	17	True	ATTAAA	-17	NA	22946408	22953334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22946458_22947032_22947155_22947602_22951473_22951559_22952931_22953136
ES.4430.58	chr11	+	3267	2	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	7735	-185	-2552	185	intron_retention	FALSE	canonical	3	5436	junction_1	0	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAACTTGTCATTTTAA	NA	False	NA	19	True	ATTAAA	-19	NA	22948384	22953336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_22949173_22950857
ES.4430.59	chr11	+	6194	1	Genic_Genomic	ENSMUSG00000007739.11	novel	NA	NA	NA	NA	-1211	2139	mono-exon	FALSE	NA	NA	NA	NA	NA	1508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTAGTGTCCGATTCC	NA	False	NA	NA	False	NA	NA	NA	22949725	22955919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_22949700_22955900
ES.4430.6	chr11	+	4548	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	75	-2139	-32	2139	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTAGTGTCCGATTCC	NA	False	NA	NA	False	NA	NA	NA	22940593	22955919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.60	chr11	+	1168	6	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	10379	124	-39	-124	3prime_fragment	FALSE	canonical	3	5016	junction_1	325.005599951755	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTGGTTTTAGTTTTC	NA	False	NA	NA	False	AATGAA	-16	NA	22950897	22953656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ES.4430.61	chr11	+	4067	2	FSM	ENSMUSG00000007739.11	ENSMUST00000174689.2	507	2	-496	-3064	-496	2139	multi-exon	FALSE	canonical	3	5420	junction_1	0	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTAGTGTCCGATTCC	NA	False	NA	NA	False	NA	NA	NA	22951437	22955919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_22952402_22952816
ES.4430.8	chr11	+	1951	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-31	186	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_11	1409.40968800383	1505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACTTGTCATTTTAAA	NA	False	NA	20	True	ATTAAA	-20	NA	22940594	22953337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952180_22952402_22952816_22952931_22953136
ES.4430.9	chr11	+	5899	9	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	-12	187	intron_retention	FALSE	canonical	3	4673	junction_2	385.486056816586	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACTTGTCATTTTAAAA	NA	False	NA	21	True	ATTAAA	-21	NA	22940613	22953338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22952402_22952816_22952931_22953136
ES.4431.1	chr11	+	801	3	NNC	ENSMUSG00000049811.18	novel	1935	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCATGTACCTCAAGAC	NA	False	NA	2	True	AATAAA	-13	NA	22958351	22973724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22958632_22965658_22965885_22973429
ES.4431.10	chr11	+	2004	4	NIC	ENSMUSG00000049811.18	novel	2034	5	NA	NA	252	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	2.86744175568088	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTGGTTGGTAATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	22970807	22980788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22971134_22973429_22973530_22978855_22979011_22979365
ES.4431.2	chr11	+	2121	5	NNC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	26	18	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	5.1720402163943	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTAGAGTCTGGTCTTT	NA	False	NA	37	True	NA	NA	NA	22958372	22973759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22958632_22965654_22965885_22969999_22971134_22971493_22971662_22973429
ES.4431.3	chr11	+	2113	6	NIC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.81175454637056	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCATGTACCTCAAGAC	NA	False	NA	2	True	AATAAA	-13	NA	22958449	22973724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22971493_22971662_22973429
ES.4431.4	chr11	+	4138	3	NNC	ENSMUSG00000049811.18	novel	1935	4	NA	NA	-14	0	intron_retention	FALSE	canonical	2	3	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACCTCAAGACATTCCT	NA	False	NA	8	True	AATAAA	-19	NA	22958450	22973730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22958632_22965658_22965885_22969999
ES.4431.5	chr11	+	4766	6	NNC	ENSMUSG00000049811.18	novel	2034	5	NA	NA	9	-370	intron_retention	FALSE	canonical	2	2	junction_4	6.93974062915899	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTCCTGAACTTAAT	NA	False	NA	NA	False	NA	NA	NA	22958473	22980418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22958632_22965654_22965885_22969999_22971134_22971493_22973530_22978855_22979011_22979365
ES.4431.7	chr11	+	3417	8	NNC	ENSMUSG00000049811.18	novel	2034	5	NA	NA	63	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.70668262531743	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGGTAATTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	22958527	22980790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22971493_22971662_22973432_22973530_22978855_22979011_22979365
ES.4431.9	chr11	+	1092	4	NNC	ENSMUSG00000049811.18	novel	1935	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.54247233265651	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCATGTACCTCAAGAC	NA	False	NA	2	True	AATAAA	-13	NA	22970471	22973724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_22971134_22971493_22971538_22972350_22972442_22973429
ES.4432.1	chr11	+	4192	1	Intergenic	novelGene_3418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGGAAGGAAAGA	7602	False	NA	NA	False	NA	NA	NA	22981453	22985645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_22981500_22985600
ES.4433.1	chr11	+	181	1	Intergenic	novelGene_3419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAATACCTCATGTC	NA	False	NA	NA	False	NA	NA	NA	23031369	23031550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23031400_23031600
ES.4434.1	chr11	+	223	1	Intergenic	novelGene_3420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTTATTTGACTCCT	NA	False	NA	NA	False	NA	NA	NA	23047476	23047699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23047500_23047700
ES.4435.1	chr11	-	179	1	Intergenic	novelGene_3421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	23077579	23077400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23077400_23077600
ES.4436.1	chr11	-	200	1	Intergenic	novelGene_3422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTTCTTTTGAGCA	NA	False	NA	NA	False	NA	NA	NA	23107263	23107063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23107100_23107300
ES.4437.1	chr11	+	182	1	Intergenic	novelGene_3423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	23134054	23134236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23134100_23134200
ES.4438.1	chr11	-	208	1	Intergenic	novelGene_3424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCAAGCAAACACGGGAG	NA	False	NA	NA	False	AAGAAA	-9	NA	23162031	23161823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23161800_23162000
ES.4439.1	chr11	+	7941	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-477	-566	intron_retention	FALSE	non_canonical	0	0	junction_17	597.40431009679	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTCCTACTTAATG	NA	False	NA	28	True	AATAAA	-34	NA	23205563	23247031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23206608_23206718_23211834_23211967_23217661_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236731_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.10	chr11	+	4024	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-129	5	intron_retention	FALSE	canonical	2	3	junction_16	475.828359389438	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTTTGTATAAGAA	NA	False	NA	17	True	ATTAAA	-26	NA	23205911	23246238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.100	chr11	+	4511	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-7	411	intron_retention	FALSE	canonical	2	12	junction_4	583.98516967471	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCATGTGCATATCATC	NA	False	NA	13	True	ATTAAA	-23	NA	23206033	23246644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.105	chr11	+	3803	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTTTCTTATGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	23206033	23246224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206210_23206429_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.109	chr11	+	4920	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-3	-585	intron_retention	FALSE	canonical	0	0	junction_5	589.569125378865	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206037	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23223042_23223156_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.11	chr11	+	4153	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-129	482	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTTGTTTGTGTGTG	NA	False	NA	34	True	NA	NA	NA	23205911	23246715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.112	chr11	+	4453	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	1701	junction_1	176.498402118584	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTTATGTGTTTT	NA	False	NA	6	True	ATTAAA	-15	NA	23206038	23246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.114	chr11	+	4077	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	55	intron_retention	FALSE	non_canonical	0	0	junction_5	468.284455856931	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGTTTTGGTCATCT	NA	False	NA	67	True	AAGAAA	-30	NA	23206039	23246288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226483_23227033_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.116	chr11	+	4500	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	206	intron_retention	FALSE	canonical	0	0	junction_1	588.788567823799	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAATTTTTTCTTGTAA	NA	False	NA	-12	True	AGTAAA	-39	NA	23206039	23246439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23207269_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.118	chr11	+	4684	25	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	0	668	intron_retention	FALSE	canonical	0	0	junction_4	591.787087217373	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAAACAAAACTCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	23206040	23246901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221200_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245963
ES.4439.120	chr11	+	3676	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206040	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206099_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.124	chr11	+	4766	26	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	2	679	intron_retention	FALSE	canonical	2	4	junction_3	587.177718923326	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206042	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218848_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.128	chr11	+	4100	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	2	679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585.451853924718	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206042	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206164_23206647_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243971_23244149_23244595_23244693_23245960
ES.4439.13	chr11	+	4997	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-124	-584	intron_retention	FALSE	canonical	2	12	junction_4	583.98516967471	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23205916	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.130	chr11	+	4756	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	3	-584	intron_retention	FALSE	canonical	0	0	junction_13	467.64399891608	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206043	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234385_23234597_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.132	chr11	+	4776	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	4	-12	intron_retention	FALSE	canonical	3	1647	junction_7	191.795237748857	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCCCTTTTTCTTATG	NA	False	NA	0	True	ATTAAA	-9	NA	23206044	23246221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.133	chr11	+	3907	24	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	4	5	intron_retention	FALSE	non_canonical	0	0	junction_7	582.401582264828	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTTTGTATAAGAA	NA	False	NA	17	True	ATTAAA	-26	NA	23206044	23246238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228324_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243971_23244149_23244595_23244693_23245960
ES.4439.135	chr11	+	4188	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	4	411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCATGTGCATATCATC	NA	False	NA	13	True	ATTAAA	-23	NA	23206044	23246644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206164_23206407_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.136	chr11	+	3750	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-7	224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAATACAAATTTTAATT	NA	False	NA	6	True	TATAAA	-12	NA	23206047	23246457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206652_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.137	chr11	+	3885	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-7	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTTTGGTCATC	NA	False	NA	66	True	AAGAAA	-29	NA	23206047	23246287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206184_23206370_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.138	chr11	+	3566	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-6	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCATTGTTTAAGCTTT	NA	False	NA	53	True	AAGAAA	-16	NA	23206048	23246274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206652_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.139	chr11	+	3589	23	ISM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-29	4159	-6	-2143	5prime_fragment	FALSE	canonical	2	1142	junction_7	239.145504482208	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTCAAGACTATGTG	NA	False	NA	NA	False	ACTAAA	-27	NA	23206048	23244090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988
ES.4439.14	chr11	+	4628	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-157	1533	-120	483	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTTTGTGTGTGT	NA	False	NA	35	True	NA	NA	NA	23205920	23246716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.140	chr11	+	3827	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-5	6	intron_retention	FALSE	canonical	0	0	junction_19	475.957310122033	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTTTGTATAAGAAA	NA	False	NA	18	True	ATTAAA	-27	NA	23206049	23246239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.141	chr11	+	4273	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-5	679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	749.75221646533	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206049	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206652_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227033_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.145	chr11	+	3653	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-1	35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	746.097832949112	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTTTCATTGTTTA	NA	False	NA	47	True	AAGAAA	-10	NA	23206053	23246268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206644_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237322_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.146	chr11	+	3597	27	NNC	ENSMUSG00000020290.15	novel	3471	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	671.13070381084	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206053	23246233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.147	chr11	+	4241	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-1	649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	673.699972069811	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206053	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206644_23206718_23211834_23211967_23217661_23217764_23218848_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.148	chr11	+	3418	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-1	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTTTTTCTCTCTGCA	NA	False	NA	-99	True	ATTAAA	-15	NA	23206053	23246122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.149	chr11	+	4134	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	54	intron_retention	FALSE	canonical	2	12	junction_4	583.98516967471	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTTTGGTCATC	NA	False	NA	66	True	AAGAAA	-29	NA	23206053	23246287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.15	chr11	+	4819	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-152	1337	-115	679	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23205925	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.150	chr11	+	4929	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	649	intron_retention	FALSE	canonical	0	0	junction_1	588.788567823799	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206053	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23207269_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.152	chr11	+	3852	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	41	intron_retention	FALSE	canonical	2	12	junction_11	476.154749987573	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCATTGTTTAAGCTTT	NA	False	NA	53	True	AAGAAA	-16	NA	23206056	23246274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.154	chr11	+	4765	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	649	intron_retention	FALSE	canonical	0	0	junction_2	585.92048061149	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206056	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23212638_23212746_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.155	chr11	+	4034	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-1	649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.023403270193	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206056	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206644_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228282_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.159	chr11	+	4458	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	649	intron_retention	FALSE	canonical	2	12	junction_11	476.154749987573	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206058	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.16	chr11	+	4454	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-151	1701	-114	315	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTAGAGCTGCATTGTC	NA	False	NA	-83	True	AGTAAA	-17	NA	23205926	23246548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.162	chr11	+	4521	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	649	intron_retention	FALSE	canonical	2	3	junction_16	475.828359389438	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206058	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.163	chr11	+	4685	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	670	intron_retention	FALSE	canonical	0	0	junction_3	468.146900911811	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAAACTCTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	23206058	23246903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217772_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.164	chr11	+	3399	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	585.451853924718	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206058	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243971_23244149_23244595_23244693_23245960
ES.4439.165	chr11	+	5532	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAACCAGTGCAAATTCC	NA	False	NA	NA	False	AATAAA	-42	NA	23206058	23248250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206652_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.166	chr11	+	4145	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	-586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	466.600017562032	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCCTTCACTGACTT	NA	False	NA	8	True	AATAAA	-14	NA	23206058	23247011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206158_23211914_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.167	chr11	+	4584	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	679	intron_retention	FALSE	canonical	0	0	junction_2	478.155098976	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206058	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.168	chr11	+	3949	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1	-7	intron_retention	FALSE	canonical	2	7	junction_22	462.043421405271	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206058	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23244039_23244149_23244595_23244693_23245960
ES.4439.17	chr11	+	4240	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-112	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23205928	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205969_23206644_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.173	chr11	+	4369	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	2	-586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	671.13070381084	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCCTTCACTGACTT	NA	False	NA	8	True	AATAAA	-14	NA	23206059	23247011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.177	chr11	+	4721	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	4	649	intron_retention	FALSE	canonical	2	12	junction_4	583.98516967471	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206061	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.178	chr11	+	4567	23	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	4	-584	intron_retention	FALSE	non_canonical	0	0	junction_6	457.102498587435	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206061	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228791_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.179	chr11	+	5459	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	5	43	intron_retention	FALSE	canonical	3	1647	junction_6	192.984310799806	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTTTAAGCTTTTG	NA	False	NA	55	True	AAGAAA	-18	NA	23206062	23246276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.18	chr11	+	3470	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-112	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTTATGTGTTTT	NA	False	NA	6	True	ATTAAA	-15	NA	23205928	23246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205985_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.180	chr11	+	3509	22	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	5	-8	intron_retention	FALSE	canonical	0	0	junction_9	499.798081677971	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206062	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.181	chr11	+	4262	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	5	230	intron_retention	FALSE	canonical	1	1	junction_3	589.145042922369	2096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATTTTAATTAGGGAG	NA	False	NA	12	True	TATAAA	-18	NA	23206062	23246463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23220466_23220496_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.182	chr11	+	4087	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	7	-7	intron_retention	FALSE	canonical	0	0	junction_2	589.964655212497	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206064	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23216052_23216146_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.184	chr11	+	4923	26	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-6	-584	intron_retention	FALSE	canonical	1	5	junction_1	588.169589149252	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206071	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23207388_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.186	chr11	+	4448	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-5	649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206072	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206461_23206654_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.188	chr11	+	3742	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-16	NA	23206076	23246228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206167_23206408_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.19	chr11	+	3994	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-112	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGCCCTTTTTCTTATG	NA	False	NA	0	True	ATTAAA	-9	NA	23205928	23246221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206532_23206662_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.190	chr11	+	3849	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	103	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	468.258831559356	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206180	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230402_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.191	chr11	+	4678	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	106	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	468.258831559356	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206183	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226409_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.192	chr11	+	5641	26	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	118	-584	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	587.30137544535	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206195	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23218691_23218848_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.194	chr11	+	3988	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	177	1839	177	177	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGACTTGTAAATTCT	NA	False	NA	-41	True	AGTAAA	-10	NA	23206254	23246410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.195	chr11	+	7136	24	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	210	-2	intron_retention	FALSE	non_canonical	0	0	junction_19	477.16499347908	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTATGTGTTTTTTGT	NA	False	NA	10	True	ATTAAA	-19	NA	23206287	23246231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239944_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.198	chr11	+	3458	25	NNC	ENSMUSG00000020290.15	novel	698	5	NA	NA	149	-7	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	465.921749212128	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206737	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206855_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.199	chr11	+	4243	25	NNC	ENSMUSG00000020290.15	novel	698	5	NA	NA	151	-584	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	465.921749212128	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206739	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206855_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.2	chr11	+	4546	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-474	-576	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	455.037053436311	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGACTTAAAATTATTC	NA	False	NA	18	True	AATAAA	-24	NA	23205566	23247021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.200	chr11	+	4141	25	NNC	ENSMUSG00000020290.15	novel	698	5	NA	NA	152	679	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	465.921749212128	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206740	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206855_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.201	chr11	+	3342	24	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	5779	7	5245	-7	3prime_fragment	FALSE	canonical	2	1142	junction_6	251.994651427022	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23211833	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.202	chr11	+	5891	23	ISM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	9730	580	9182	-580	3prime_fragment	FALSE	canonical	2	1142	junction_5	256.236315901507	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTCACTGACTTAAAATT	NA	False	NA	14	True	AATAAA	-20	NA	23215770	23247017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.203	chr11	+	7077	22	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	10574	-7	intron_retention	FALSE	canonical	2	1142	junction_4	260.099178711583	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23217162	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.204	chr11	+	3248	23	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	11071	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	483.83352098946	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTTTCATTGTTTA	NA	False	NA	47	True	AAGAAA	-10	NA	23217659	23246268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234708_23234794_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.205	chr11	+	7892	19	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-11828	18	intron_retention	FALSE	canonical	0	0	junction_18	523.374358500493	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAAATTTTCTGTGAAA	NA	False	NA	30	True	ATTAAA	-39	NA	23222815	23246251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245963
ES.4439.206	chr11	+	5959	20	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-10006	-586	intron_retention	FALSE	canonical	3	1647	junction_3	183.711987041743	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCCTTCACTGACTT	NA	False	NA	8	True	AATAAA	-14	NA	23224637	23247011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23226489_23227035_23227081_23228142_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.207	chr11	+	4720	21	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	19372	-679	-9217	679	3prime_fragment	FALSE	canonical	2	1142	junction_3	265.894264699335	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23225426	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.208	chr11	+	3038	21	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8219	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	510.754451767187	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23226424	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232526_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.209	chr11	+	3394	20	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	20979	-413	-7610	413	3prime_fragment	FALSE	canonical	2	1142	junction_2	271.641078164295	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGTGCATATCATCCC	NA	False	NA	15	True	ATTAAA	-25	NA	23227033	23246646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.21	chr11	+	3932	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-112	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCATTGTTTAAGCTT	NA	False	NA	52	True	AAGAAA	-15	NA	23205928	23246273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206405_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.210	chr11	+	3058	19	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	21955	9	-6634	-9	3prime_fragment	FALSE	canonical	2	1142	junction_1	278.999800876074	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTTTCTTATGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	23228009	23246224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.211	chr11	+	2501	16	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-5772	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	548.337179317819	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23228871	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23228926_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.212	chr11	+	2980	14	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	26468	-679	-2121	679	3prime_fragment	FALSE	canonical	3	1745	junction_9	167.79181945064	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23232522	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.213	chr11	+	2290	12	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-341	398	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_6	633.614633773741	2094	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTTTGCAGCAAGATCA	NA	False	NA	0	True	ATTAAA	-10	NA	23234302	23246631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23239794_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.214	chr11	+	5478	10	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	25	-9	intron_retention	FALSE	canonical	3	2020	junction_3	107.17321850832	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTTTCTTATGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	23234668	23246224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.215	chr11	+	7370	6	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	189	-7	intron_retention	FALSE	canonical	3	2165	junction_1	72.0710760291533	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23234832	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23234969_23235055_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.216	chr11	+	3466	7	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	1217	-518	intron_retention	FALSE	canonical	3	1745	junction_2	213.935932777393	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGTTTCGTACTTGT	NA	False	NA	76	True	AATGAA	-27	NA	23235860	23247079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.217	chr11	+	1446	4	ISM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	37729	585	9126	-585	3prime_fragment	FALSE	canonical	3	2221	junction_1	51.2596874313096	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23243769	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.23	chr11	+	4022	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-143	2125	-106	-109	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTTTCTCTCTGCAAC	NA	False	NA	-97	True	ATTAAA	-17	NA	23205934	23246124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.24	chr11	+	4112	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-106	-8	intron_retention	FALSE	non_canonical	0	0	junction_19	466.838240409174	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23205934	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237441_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.25	chr11	+	4493	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-105	-518	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAGTTTCGTACTTGT	NA	False	NA	76	True	AATGAA	-27	NA	23205935	23247079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.26	chr11	+	4680	26	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-96	410	intron_retention	FALSE	canonical	1	5	junction_1	588.169589149252	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATCATGTGCATATCAT	NA	False	NA	12	True	ATTAAA	-22	NA	23205944	23246643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23207388_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.27	chr11	+	3685	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-92	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTTTTGTTTTGGTC	NA	False	NA	63	True	AAGAAA	-26	NA	23205948	23246284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.28	chr11	+	4503	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-74	649	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23205966	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206405_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.29	chr11	+	4854	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-74	-585	intron_retention	FALSE	non_canonical	0	0	junction_13	467.64399891608	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23205966	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234364_23234554_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.3	chr11	+	3787	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-449	54	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	455.037053436311	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTTGTTTTGGTCATC	NA	False	NA	66	True	AAGAAA	-29	NA	23205591	23246287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.30	chr11	+	3565	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-49	-4	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	455.694571396237	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTTATGTGTTTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	23205991	23246229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206104_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.31	chr11	+	4360	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-48	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23205992	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206652_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.32	chr11	+	3734	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-48	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	675.02652698259	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-16	NA	23205992	23246228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23207388_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.34	chr11	+	4318	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-39	224	intron_retention	FALSE	canonical	0	0	junction_21	458.567697655791	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAATACAAATTTTAATT	NA	False	NA	6	True	TATAAA	-12	NA	23206001	23246457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243741_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.36	chr11	+	5207	25	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-39	-6	intron_retention	FALSE	canonical	2	19	junction_3	464.948920058848	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTTATGTGTTTT	NA	False	NA	6	True	ATTAAA	-15	NA	23206001	23246227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.38	chr11	+	3630	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-30	230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATTTTAATTAGGGAG	NA	False	NA	12	True	TATAAA	-18	NA	23206010	23246463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206028_23206682_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.4	chr11	+	3637	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-429	-7	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_1	452.247093522999	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23205611	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23206677_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.40	chr11	+	4916	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-29	-585	intron_retention	FALSE	canonical	0	0	junction_3	588.531060862551	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206011	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218607_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.41	chr11	+	4295	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-29	-8	intron_retention	FALSE	canonical	0	0	junction_1	588.788567823799	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206011	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23207288_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.42	chr11	+	4595	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-24	-587	intron_retention	FALSE	canonical	0	0	junction_6	457.102498587435	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCCCTTCACTGACT	NA	False	NA	7	True	AATAAA	-13	NA	23206016	23247010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.44	chr11	+	4128	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-23	-7	intron_retention	FALSE	canonical	0	0	junction_7	682.867185915387	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206017	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228123_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.47	chr11	+	3801	21	ISM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-58	6198	-21	-4182	5prime_fragment	FALSE	canonical	2	1142	junction_7	222.111655479851	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTTGATTTGGCGAT	NA	False	NA	NA	False	NA	NA	NA	23206019	23242051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462
ES.4439.49	chr11	+	3799	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	589.530191254019	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTTTTTGTATAAGA	NA	False	NA	16	True	ATTAAA	-25	NA	23206022	23246237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211843_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.5	chr11	+	3592	25	NNC	ENSMUSG00000020290.15	novel	698	5	NA	NA	-361	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	466.600017562032	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGTTTTGGTCATCTT	NA	False	NA	68	True	AAGAAA	-31	NA	23205679	23246289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.50	chr11	+	6066	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-55	-7	-18	7	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGCAAATTCCTCTGAA	NA	False	NA	NA	False	AATAAA	-26	NA	23206022	23248256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.51	chr11	+	3465	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTTATGTGTTTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	23206022	23246229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206104_23206677_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.52	chr11	+	4234	26	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-17	43	intron_retention	FALSE	canonical	1	5	junction_1	588.169589149252	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTTTAAGCTTTTG	NA	False	NA	55	True	AAGAAA	-18	NA	23206023	23246276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23207388_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.54	chr11	+	5275	24	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-17	35	intron_retention	FALSE	non_canonical	0	0	junction_1	477.673698847747	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCTTTCATTGTTTA	NA	False	NA	47	True	AAGAAA	-10	NA	23206023	23246268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206644_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.55	chr11	+	4186	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-17	649	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	455.694571396237	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	23206023	23246882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206104_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.56	chr11	+	3959	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-17	-7	intron_retention	FALSE	canonical	0	0	junction_20	467.289071548746	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206023	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241538_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.58	chr11	+	4236	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-15	679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206025	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206643_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.6	chr11	+	4330	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-274	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	823.544013638615	2104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23205766	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205868_23206610_23206718_23211834_23211967_23217661_23217764_23218848_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228349_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235099_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.60	chr11	+	3648	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	594.924131484194	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206026	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23239794_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.61	chr11	+	4047	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-13	2	intron_retention	FALSE	canonical	0	0	junction_8	465.506325294178	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTGTTTTTTGTATAA	NA	False	NA	14	True	ATTAAA	-23	NA	23206027	23246235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228732_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.62	chr11	+	3993	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-13	-8	intron_retention	FALSE	canonical	1	10	junction_19	465.157856643551	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206027	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239794_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.63	chr11	+	7463	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-13	56	intron_retention	FALSE	canonical	2	1142	junction_6	256.876033888702	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGTTTTGGTCATCTT	NA	False	NA	68	True	AAGAAA	-31	NA	23206027	23246289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.65	chr11	+	4310	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-12	-586	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_1	455.694571396237	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCCTTCACTGACTT	NA	False	NA	8	True	AATAAA	-14	NA	23206028	23247011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206104_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.68	chr11	+	4109	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-10	-9	intron_retention	FALSE	canonical	0	0	junction_3	588.531060862551	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTTTCTTATGTGT	NA	False	NA	3	True	ATTAAA	-12	NA	23206030	23246224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218607_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.69	chr11	+	7943	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-10	-8	intron_retention	FALSE	canonical	2	1142	junction_5	262.008832101465	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206030	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23221206_23226426_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.7	chr11	+	4240	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-190	1954	-153	62	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTCATCTTTATTCA	NA	False	NA	74	True	AAGAAA	-37	NA	23205887	23246295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.70	chr11	+	4574	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-10	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206030	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206195_23206434_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.71	chr11	+	5322	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-10	-585	intron_retention	FALSE	canonical	0	0	junction_6	467.953298877736	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206030	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23227634_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.74	chr11	+	4005	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-9	5	intron_retention	FALSE	non_canonical	0	0	junction_2	468.232519917544	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTTTGTATAAGAA	NA	False	NA	17	True	ATTAAA	-26	NA	23206031	23246238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211931_23217659_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.75	chr11	+	3787	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206032	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.77	chr11	+	4018	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-7	intron_retention	FALSE	non_canonical	0	0	junction_22	463.225129751542	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206032	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243996_23244149_23244595_23244693_23245960
ES.4439.78	chr11	+	4641	27	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	671.13070381084	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206032	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.8	chr11	+	4994	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-168	1178	-131	-526	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTTATATGAAGTTTC	NA	False	NA	68	True	AATGAA	-19	NA	23205909	23247071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.80	chr11	+	8186	24	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-580	intron_retention	FALSE	canonical	2	1142	junction_6	256.876033888702	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTCACTGACTTAAAATT	NA	False	NA	14	True	AATAAA	-20	NA	23206032	23247017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.82	chr11	+	4569	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	-584	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206032	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206404_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.83	chr11	+	4678	27	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	674.790635950784	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCCTTCACTGACTTA	NA	False	NA	9	True	AATAAA	-15	NA	23206032	23247012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206213_23206429_23206718_23211834_23211967_23217661_23217764_23218607_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.84	chr11	+	4018	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAATACAAATTTTAATT	NA	False	NA	6	True	TATAAA	-12	NA	23206032	23246457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.85	chr11	+	4202	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGATCATGTGCATATC	NA	False	NA	10	True	ATTAAA	-20	NA	23206032	23246641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206197_23206435_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.87	chr11	+	4024	25	NNC	ENSMUSG00000020290.15	novel	3471	26	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_20	467.289071548746	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206032	23246233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239944_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.88	chr11	+	4570	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	-588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCCCTTCACTGAC	NA	False	NA	6	True	AATAAA	-12	NA	23206032	23247009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206202_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.9	chr11	+	3535	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-130	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGTTTTGGTCATCTT	NA	False	NA	68	True	AAGAAA	-31	NA	23205910	23246289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23205969_23206644_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.90	chr11	+	5962	25	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-584	intron_retention	FALSE	canonical	2	19	junction_3	464.948920058848	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206032	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.91	chr11	+	3876	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTTTCTTATGTGTTT	NA	False	NA	5	True	ATTAAA	-14	NA	23206032	23246226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206104_23206253_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.93	chr11	+	3737	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-8	intron_retention	FALSE	canonical	0	0	junction_9	488.344665576163	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTTTTTCTTATGTGTT	NA	False	NA	4	True	ATTAAA	-13	NA	23206032	23246225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.95	chr11	+	3653	25	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	585.451853924718	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-16	NA	23206032	23246228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206201_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243988_23244149_23244595_23244693_23245960
ES.4439.96	chr11	+	4358	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCTTTTGAGATGACT	NA	False	NA	-91	True	NA	NA	NA	23206032	23246912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206087_23206440_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.97	chr11	+	3777	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-8	228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.823200808329	2096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAATTTTAATTAGGG	NA	False	NA	10	True	TATAAA	-16	NA	23206032	23246461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23206161_23206644_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.4439.99	chr11	+	6225	23	NIC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-7	-584	intron_retention	FALSE	canonical	3	1647	junction_6	192.984310799806	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTCACTGACTTAA	NA	False	NA	10	True	AATAAA	-16	NA	23206033	23247013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ES.444.1	chr1	-	2493	3	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTTCATGGGATATTT	1837	False	NA	NA	False	NA	NA	NA	52471098	52413355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52415521_52416157_52416250_52470862
ES.444.2	chr1	-	4415	2	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACGTCTATTTAAATT	1847	False	NA	NA	False	ATTAAA	-11	NA	52471088	52459069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52463259_52470862
ES.444.3	chr1	-	10693	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTGTCTGTGAACAT	1813	False	NA	NA	False	AGTAAA	-28	NA	52471122	52460429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52460400_52471100
ES.444.4	chr1	-	3745	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCATGTTGTGTTTGTA	1815	False	NA	NA	False	NA	NA	NA	52471120	52467375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52467400_52471100
ES.4440.1	chr11	-	1189	1	Intergenic	novelGene_3425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTATTACGTATAAAATG	NA	False	NA	NA	False	TTTAAA	-11	NA	23223462	23222273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23222300_23223500
ES.4441.1	chr11	-	5954	2	Antisense	novelGene_ENSMUSG00000020290.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	23239043	23233007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_23234728_23234809
ES.4442.1	chr11	-	177	1	Intergenic	novelGene_3426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACATGAGTACACCACG	7657	False	NA	NA	False	NA	NA	NA	23249825	23249648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23249600_23249800
ES.4443.1	chr11	+	226	1	Intergenic	novelGene_3427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCATTTCATACATG	NA	False	NA	NA	False	NA	NA	NA	23252608	23252834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23252600_23252800
ES.4444.1	chr11	-	927	1	Intergenic	novelGene_3428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAGAAGCTCAGAAAGA	1160	False	NA	NA	False	NA	NA	NA	23256322	23255395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23255400_23256300
ES.4445.1	chr11	+	11410	80	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-526	343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.6408086901496	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTGTCTTAAGCTTA	158	False	NA	NA	False	AATAAA	-19	NA	23256368	23440087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23256406_23256827_23257017_23270660_23270749_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23312576_23312613_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.11	chr11	+	8608	66	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	22	221	intron_retention	TRUE	non_canonical	0	0	junction_65	28.56879582122	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAAGTAACTCTTGAT	364	False	NA	NA	False	AGTAAA	-15	NA	23256937	23411118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410912_23410999
ES.4445.12	chr11	+	8606	66	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	24	221	intron_retention	TRUE	non_canonical	0	0	junction_32	29.5723203380715	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAAGTAACTCTTGAT	366	False	NA	NA	False	AGTAAA	-15	NA	23256939	23411118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353896_23355866_23355954_23362214_23362418_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410918_23411007
ES.4445.13	chr11	+	9711	61	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	28.0282149508907	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCGAATGATACATCGAT	369	False	NA	NA	False	NA	NA	NA	23256942	23406686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4445.14	chr11	+	11448	80	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	30.2096769164175	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	373	False	NA	12	True	AATAAA	-19	NA	23256946	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23335584_23335740_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.15	chr11	+	3771	1	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	38	-109928	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGCCGGAGAGGTGG	380	False	NA	NA	False	NA	NA	NA	23256953	23260724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23257000_23260700
ES.4445.17	chr11	+	9761	61	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	29.0622846467529	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGCGAATGATACATC	381	False	NA	NA	False	NA	NA	NA	23256954	23406683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362149_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4445.18	chr11	+	11101	77	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	47	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	29.8417803750996	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGTTTTATTTTTATT	389	False	NA	11	True	AATAAA	-18	NA	23256962	23439740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.19	chr11	+	179	2	Antisense	novelGene_ENSMUSG00000106362.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3534	False	NA	NA	False	NA	NA	NA	23260994	23452218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_23261045_23452089
ES.4445.2	chr11	+	11773	79	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-417	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	29.2910450286289	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTGTTACATAAGTCG	267	False	NA	77	True	TATAAA	-17	NA	23256477	23439806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332607_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.20	chr11	+	177	2	Intergenic	novelGene_3429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAAGAA	3534	False	NA	NA	False	NA	NA	NA	23260994	23310240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23261066_23310134
ES.4445.21	chr11	+	11140	77	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	26521	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_39	28.5991344570032	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23283436	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376631_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.23	chr11	+	4764	2	Intergenic	novelGene_3433	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAAGGAAAAAAGA	443	False	NA	NA	False	NA	NA	NA	23285105	23293004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23286208_23289342
ES.4445.24	chr11	+	10492	74	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	36653	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.4962077451571	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGGTTTTATTTTTAT	8906	False	NA	10	True	AATAAA	-17	NA	23293568	23439739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376631_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.27	chr11	+	9823	68	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	48136	7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_63	26.2132216974112	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTGACATGACTGC	NA	False	NA	22	True	AATAAA	-29	NA	23305051	23439751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.28	chr11	+	223	1	Intergenic	novelGene_3435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCCAGATGCTCTAATGA	3117	False	NA	NA	False	AAGAAA	-30	NA	23310067	23310290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23310100_23310300
ES.4445.29	chr11	+	3972	3	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-53571	-53704	intron_retention	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCTACTACTACACCAC	4454	False	NA	NA	False	NA	NA	NA	23311404	23316948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23313975_23315364_23316717_23316898
ES.4445.3	chr11	+	8198	62	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-406	-1885	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.8754100222066	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCACGAATTTCAGTC	278	False	NA	20	True	CATAAA	-33	NA	23256488	23404801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23256675_23256756_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4445.30	chr11	+	8390	64	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-51902	-1579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_63	24.3774282340576	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTAAATTCATGTTTA	6123	False	NA	NA	False	ATTAAA	-18	NA	23313073	23435744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23435494
ES.4445.34	chr11	+	6040	53	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-44696	3679	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	27.2647210657454	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTACAATGTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	23320279	23414576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353556_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23363474_23363646_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216
ES.4445.36	chr11	+	8016	58	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-32425	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	22.7532564748278	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	NA	False	NA	7	True	AATAAA	-14	NA	23332550	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402523_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.37	chr11	+	7502	53	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-26541	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	22.4742702983609	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	NA	False	NA	7	True	AATAAA	-14	NA	23338434	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.4	chr11	+	11719	79	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-374	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	28.4435754125342	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	310	False	NA	12	True	AATAAA	-19	NA	23256520	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.40	chr11	+	3983	37	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	96944	25167	-11116	3680	internal_fragment	FALSE	canonical	3	55	junction_4	17.7994659373342	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTACAATGTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	23353859	23414577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216
ES.4445.42	chr11	+	6323	44	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-2408	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	21.2417896842202	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23367646	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376631_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.43	chr11	+	5956	42	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-16	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.5747961147634	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTAAAAATAATGGTTT	NA	False	NA	1	True	AATAAA	-8	NA	23370038	23439730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382397_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388944_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.44	chr11	+	5511	37	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	6005	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_32	21.4581130876867	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23376059	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.45	chr11	+	5578	38	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	119715	3	6576	-3	3prime_fragment	FALSE	canonical	3	59	junction_25	15.9630233794451	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23376630	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.46	chr11	+	5290	37	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	6723	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_34	21.6125213764362	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23376777	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23437078_23437223_23438208_23438369_23438583
ES.4445.47	chr11	+	5243	36	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	12245	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	21.7085706764938	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23382299	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414266_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.48	chr11	+	3210	18	ISM	ENSMUSG00000056342.17	ENSMUST00000130131.2	4439	24	12284	458	12284	-458	3prime_fragment	FALSE	canonical	3	67	junction_2	14.0451570296013	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTAAGCTGTCTT	NA	False	NA	NA	False	CATAAA	-18	NA	23382338	23406228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4445.49	chr11	+	5219	34	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	125702	-72	12563	72	3prime_fragment	FALSE	canonical	3	59	junction_21	15.8391246476926	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAAGTCGTTTGTTTCTT	NA	False	NA	87	True	TATAAA	-27	NA	23382617	23439816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.5	chr11	+	11687	80	FSM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	-332	8	-311	-8	multi-exon	FALSE	canonical	3	5	junction_12	29.5306499314007	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	10	False	NA	7	True	AATAAA	-14	NA	23256583	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23312576_23312613_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.50	chr11	+	4965	32	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	128990	9	15851	-9	3prime_fragment	FALSE	canonical	3	59	junction_19	16.1102471251984	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATAATGGTTTTATTT	NA	False	NA	6	True	AATAAA	-13	NA	23385905	23439735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.51	chr11	+	5822	31	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	15966	-8	intron_retention	FALSE	canonical	3	59	junction_19	16.355393266103	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	NA	False	NA	7	True	AATAAA	-14	NA	23386020	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.52	chr11	+	4799	31	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	131949	3	18810	-3	3prime_fragment	FALSE	canonical	3	59	junction_18	16.3742345028876	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23388864	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.53	chr11	+	4625	18	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	132035	25979	18896	2868	internal_fragment	FALSE	canonical	3	75	junction_1	13.7765157983887	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTTGGTAGGCCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	23388950	23413765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561
ES.4445.54	chr11	+	4228	24	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	139999	3	-11023	-3	3prime_fragment	FALSE	canonical	3	59	junction_11	16.4718927697387	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGTTTTATTTTTATTG	NA	False	NA	12	True	AATAAA	-19	NA	23396914	23439741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.56	chr11	+	3820	20	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	145873	8	-5149	-8	3prime_fragment	FALSE	canonical	3	59	junction_7	17.4907969469471	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	1188	False	NA	7	True	AATAAA	-14	NA	23402788	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.57	chr11	+	3289	14	ISM	ENSMUSG00000056342.17	ENSMUST00000137823.8	11363	80	153644	8	2483	-8	3prime_fragment	FALSE	canonical	3	59	junction_1	19.0188321495133	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATGGTTTTATTTT	8959	False	NA	7	True	AATAAA	-14	NA	23410559	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ES.4445.58	chr11	+	4415	1	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	-5028	-1132	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCCCACATGAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	23431776	23436191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23431800_23436200
ES.4445.7	chr11	+	7898	62	NNC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	8	-1887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_52	29.6801094246334	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCACGAATTTCAG	329	False	NA	18	True	CATAAA	-31	NA	23256902	23404799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23312576_23312613_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394307_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4445.8	chr11	+	7743	60	NIC	ENSMUSG00000056342.17	novel	12200	80	NA	NA	8	-1894	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	29.2364382092135	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTCTTGTGGCTCACGA	329	False	NA	11	True	CATAAA	-24	NA	23256902	23404792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524
ES.4446.1	chr11	-	1798	1	Intergenic	novelGene_3430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23270255	23268457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23268500_23270300
ES.4447.1	chr11	-	175	1	Intergenic	novelGene_3431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGTAAAATACATCGA	NA	False	NA	NA	False	NA	NA	NA	23271587	23271412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23271400_23271600
ES.4448.1	chr11	-	169	1	Intergenic	novelGene_3432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	23282307	23282138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23282100_23282300
ES.4449.1	chr11	-	182	1	Intergenic	novelGene_3434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGGAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	23307473	23307291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23307300_23307500
ES.445.1	chr1	-	3947	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	-73	0	-73	0	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	False	NA	0	True	AATAAA	-21	NA	52539911	52496452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ES.445.4	chr1	-	2962	9	NNC	ENSMUSG00000002881.15	novel	3874	8	NA	NA	-159	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	10.7289037184607	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAATCCTTGCTTAGAG	NA	False	NA	-7	True	AATAAA	-14	NA	52539633	52496459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529175_52529874_52529915_52539368
ES.445.5	chr1	-	2502	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	180	1192	180	732	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTTGACTTAAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	52539658	52497644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ES.445.6	chr1	-	2232	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	236	1406	-128	518	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACTGTGTGTTTAA	NA	False	NA	NA	False	GATAAA	-18	NA	52539602	52497858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ES.4450.1	chr11	-	5257	1	Antisense	novelGene_ENSMUSG00000056342.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTTTAAAACTATGAATA	NA	False	NA	NA	False	NA	NA	NA	23312851	23307594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_23307600_23312900
ES.4451.1	chr11	-	3162	1	Antisense	novelGene_ENSMUSG00000056342.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACACCAATATATGAACTA	NA	False	NA	NA	False	NA	NA	NA	23319884	23316722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_23316700_23319900
ES.4452.1	chr11	-	1461	1	Intergenic	novelGene_3436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCATTTCCTTAGAA	NA	False	NA	NA	False	AATAAA	-34	NA	23322418	23320957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23321000_23322400
ES.4453.1	chr11	-	3925	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	57	-959	-43	294	multi-exon	TRUE	canonical	3	225	junction_2	27.6394193137265	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTCTGTTTTTTATA	NA	False	NA	NA	False	AATACA	-19	NA	23447973	23437587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.10	chr11	-	7566	3	Fusion	ENSMUSG00000020288.14_ENSMUSG00000106362.4	novel	697	6	NA	NA	-8	-154	intron_retention	FALSE	canonical	1	2	junction_2	121	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447913	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_23440571_23440668_23442307_23442819
ES.4453.11	chr11	-	1790	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-32	-154	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	88.8056163764432	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447962	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23440987_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.12	chr11	-	4399	7	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-12	-154	intron_retention	FALSE	canonical	1	2	junction_4	95.2750404530659	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447917	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23442307_23442819_23445065_23446690_23446882_23447774
ES.4453.13	chr11	-	4314	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-8	-154	intron_retention	FALSE	canonical	3	225	junction_2	27.3053718768548	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447913	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23443394_23444978_23446882_23447774
ES.4453.14	chr11	-	1758	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-4	-154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	108.876076343704	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447934	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440590_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443396_23444978_23445065_23446690_23446882_23447774
ES.4453.16	chr11	-	5924	6	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-8	-154	intron_retention	FALSE	canonical	3	225	junction_2	24.6787357860973	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447938	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23446882_23447774
ES.4453.18	chr11	-	4333	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-44	-155	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAAGTGTGCTTTATT	NA	False	NA	-6	True	AATAAA	-18	NA	23447974	23439737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
ES.4453.19	chr11	-	3258	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-10	259	intron_retention	FALSE	canonical	3	225	junction_2	26.4259973006381	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTTCCAAGGTGTT	NA	False	NA	-5	True	AATAAA	-28	NA	23447915	23440061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23443394_23444978_23445065_23446690
ES.4453.2	chr11	-	3611	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	81	-669	-19	4	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTTATTTCATAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	23447949	23437877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.20	chr11	-	1439	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-6	259	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	88.8056163764432	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTTCCAAGGTGTT	NA	False	NA	-5	True	AATAAA	-28	NA	23447936	23440061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23440987_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.21	chr11	-	3032	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-18	258	intron_retention	FALSE	canonical	3	225	junction_2	29.3792254644143	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCAGTTTCCAAGGTGT	NA	False	NA	-6	True	AATAAA	-27	NA	23447948	23440062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.22	chr11	-	1439	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	56	1528	-44	246	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTTATTCTAAGCCAG	NA	False	NA	-18	True	AATAAA	-15	NA	23447974	23440074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.23	chr11	-	3806	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-8	92	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCTGCATTGAGTGAAA	NA	False	NA	NA	False	TTTAAA	-21	NA	23447938	23440228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
ES.4453.24	chr11	-	1273	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	67	1683	-33	91	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGCATTGAGTGAA	NA	False	NA	NA	False	TTTAAA	-20	NA	23447963	23440229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.25	chr11	-	6027	5	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-2	83	intron_retention	FALSE	canonical	3	225	junction_2	25.6027342289842	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCTAGATGCTGCAT	NA	False	NA	NA	False	TTTAAA	-12	NA	23447907	23440237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23446882_23447774
ES.4453.26	chr11	-	2664	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-1	13	intron_retention	FALSE	canonical	3	225	junction_2	29.3792254644143	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCAGAATGCTTGAATTA	NA	False	NA	-5	True	AATAAA	-19	NA	23447931	23440413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.27	chr11	-	1070	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	84	1869	-16	11	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCCCAGAATGCTTGAAT	NA	False	NA	-7	True	AATAAA	-17	NA	23447946	23440415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.29	chr11	-	1734	8	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-50	6	intron_retention	FALSE	canonical	3	225	junction_2	28.4497408617731	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447980	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.3	chr11	-	3130	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	35	-4	intron_retention	FALSE	canonical	0	0	junction_5	90.3886573359733	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGGGCACTGAAATC	NA	False	NA	NA	False	AATAAA	-9	NA	23447995	23438552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443130_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.30	chr11	-	879	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-31	6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	98.6097808986963	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447961	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23446690_23446882_23447774
ES.4453.31	chr11	-	2024	8	NIC	ENSMUSG00000020288.14	novel	3583	9	NA	NA	-8	6	intron_retention	FALSE	canonical	3	33	junction_7	81.7791949990575	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447938	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23443394_23444978_23445065_23446690_23446877_23447774
ES.4453.32	chr11	-	1223	9	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	90.3886573359733	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447956	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443130_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.33	chr11	-	3639	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-33	6	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447963	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
ES.4453.34	chr11	-	1107	9	NNC	ENSMUSG00000020288.14	novel	3583	9	NA	NA	-44	6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	102.671122400605	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTACCGCCCAGAATGCT	NA	False	NA	-12	True	AATAAA	-12	NA	23447974	23440420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440590_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446877_23447774
ES.4453.35	chr11	-	3337	5	NNC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-11	5	intron_retention	FALSE	canonical	3	15	junction_1	116.203216392663	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTACCGCCCAGAATGC	NA	False	NA	-13	True	AATAAA	-11	NA	23447941	23440421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440590_23440668_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.4	chr11	-	3729	2	FSM	ENSMUSG00000020288.14	ENSMUST00000153409.2	553	2	-1302	-1874	-73	-4	multi-exon	FALSE	canonical	3	244	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAGGGCACTGAAATC	NA	False	NA	NA	False	AATAAA	-9	NA	23442379	23438552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668
ES.4453.6	chr11	-	1844	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	51	1128	-49	-92	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGGCCACAGCTAAAGAG	NA	False	NA	57	True	AATAAA	-17	NA	23447979	23439674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.7	chr11	-	1322	6	NNC	ENSMUSG00000020288.14	novel	3583	9	NA	NA	-648	-152	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	100.975244490915	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGTGTGCTTTATTTCC	NA	False	NA	-3	True	AATAAA	-21	NA	23442954	23439734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23442819
ES.4453.8	chr11	-	2714	8	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-9	-154	intron_retention	FALSE	canonical	3	225	junction_2	28.0145734668692	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447939	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23443394_23444978_23445065_23446690_23446882_23447774
ES.4453.9	chr11	-	4010	5	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	-18	-154	intron_retention	FALSE	canonical	3	232	junction_3	30.3726850969749	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAAGTGTGCTTTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	23447948	23439736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23440571_23440668_23443394_23444978_23445065_23446690_23446882_23447774
ES.4454.1	chr11	-	176	1	Intergenic	novelGene_3437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATATTTTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	23452804	23452628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23452600_23452800
ES.4455.1	chr11	+	175	1	Intergenic	novelGene_3438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	23453957	23454132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23454000_23454100
ES.4456.1	chr11	+	209	1	Intergenic	novelGene_3439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	23468241	23468450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23468200_23468400
ES.4457.1	chr11	+	3429	2	Antisense	novelGene_ENSMUSG00000042208.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23523591	23531792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_23526825_23531596
ES.4458.1	chr11	+	1029	1	Antisense	novelGene_ENSMUSG00002075061.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	23576238	23577267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_23576200_23577300
ES.4459.1	chr11	-	2445	21	NIC	ENSMUSG00000042208.16	novel	2569	23	NA	NA	-15	-22	combination_of_known_splicesites	TRUE	canonical	0	0	junction_20	34.1500732063637	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAAATAAAAATTAAATT	NA	False	NA	NA	False	NA	NA	NA	23583654	23514982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23515137_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23583492
ES.4459.11	chr11	-	5835	21	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	1	7	intron_retention	FALSE	canonical	0	0	junction_7	40.4183126812587	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583630	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581775
ES.4459.12	chr11	-	5631	24	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-15	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	38.3875866041746	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583654	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581517_23581556_23581775_23583211_23583492
ES.4459.13	chr11	-	4203	23	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	39.0218205538753	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583626	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581517_23581574_23583492
ES.4459.14	chr11	-	4331	23	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-7	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	39.6618975302806	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583646	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572528_23574935_23575123_23578872_23579032_23581204_23581335_23583027_23583211_23583492
ES.4459.15	chr11	-	4230	23	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	4	7	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	33.4710001529633	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583627	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583111_23583211_23583492
ES.4459.16	chr11	-	5087	10	ISM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	30906	-122	-2712	7	3prime_fragment	FALSE	canonical	3	98	junction_6	9.78408887233392	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23548121	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380
ES.4459.17	chr11	-	3641	12	NNC	ENSMUSG00000042208.16	novel	3646	19	NA	NA	-12571	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	33.8909285992921	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23557980	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23557514_23557731
ES.4459.18	chr11	-	5260	25	Fusion	ENSMUSG00000020283.6_ENSMUSG00000042208.16	novel	4128	22	NA	NA	-16	7	multi-exon	FALSE	canonical	0	0	junction_21	114.876382835348	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23615868	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23599269_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.2	chr11	-	4695	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-29	-538	-21	1	multi-exon	TRUE	canonical	3	83	junction_12	9.91208520476776	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCCAAACTTGGCAG	NA	False	NA	NA	False	AATAAA	-14	NA	23583660	23523249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.20	chr11	-	3113	14	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	2	7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	30.9295821707057	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583637	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.23	chr11	-	4126	21	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	26.00552825843	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTGGAGAAAGTCC	NA	False	NA	-13	True	AATAAA	-11	NA	23583660	23523785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.24	chr11	-	3938	21	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	26.5082534317144	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTGGAGAAAGTCC	NA	False	NA	-13	True	AATAAA	-11	NA	23583569	23523785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23583492
ES.4459.25	chr11	-	3900	21	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-31	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	40.8405129742514	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTGGAGAAAGTCC	NA	False	NA	-13	True	AATAAA	-11	NA	23583580	23523785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581517_23581556_23583492
ES.4459.26	chr11	-	4094	22	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	30	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	25.9154389761058	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTGGAGAAAGTCC	NA	False	NA	-13	True	AATAAA	-11	NA	23583601	23523785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583498
ES.4459.28	chr11	-	3855	21	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	26.2969104649196	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTGTATTTTATATC	NA	False	NA	-9	True	AGTAAA	-19	NA	23583562	23523904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.29	chr11	-	4017	23	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	33.7449414635759	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTTTGTATTTTATA	NA	False	NA	-11	True	AGTAAA	-17	NA	23583531	23523906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581775_23581884_23583492
ES.4459.3	chr11	-	4182	23	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	2	18	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	32.9210488068873	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTGATCTGACTTGTT	NA	False	NA	3	True	AATAAA	-27	NA	23583629	23523769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581517_23581556_23583492
ES.4459.30	chr11	-	4040	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-32	120	-24	-5	multi-exon	FALSE	canonical	3	83	junction_12	9.91208520476776	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGCTTTGTATTTTAT	NA	False	NA	-12	True	AGTAAA	-16	NA	23583663	23523907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.31	chr11	-	6168	21	ISM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-2	120	-2	-5	intron_retention	FALSE	canonical	3	83	junction_12	10.1512314523904	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGCTTTGTATTTTAT	NA	False	NA	-12	True	AGTAAA	-16	NA	23583633	23523907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204
ES.4459.33	chr11	-	5413	22	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	245	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.0516481132562	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTGCTTTGTATTTT	NA	False	NA	-14	True	AGTAAA	-14	NA	23583304	23523909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581775
ES.4459.34	chr11	-	3614	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-33	547	-25	-432	multi-exon	FALSE	canonical	3	83	junction_12	9.91208520476776	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCTTACACCTAGTT	NA	False	NA	NA	False	AATAAA	-40	NA	23583664	23524334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.35	chr11	-	3706	13	NNC	ENSMUSG00000042208.16	novel	1279	10	NA	NA	2	7683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.328607902118	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTTGGAGTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-20	NA	23583629	23554146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23556212_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.36	chr11	-	2984	11	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	2	4308	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	33.855723297546	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCGGTTACCACTCTG	NA	False	NA	NA	False	NA	NA	NA	23583629	23557521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.37	chr11	-	1793	6	NNC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-10	30285	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.896687960325	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAGAATTCAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	23615862	23566193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23566246_23585002_23585041_23598824_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.38	chr11	-	4475	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	73	-402	-34	402	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAACTGGGGAGTTT	NA	False	NA	NA	False	TTTAAA	-29	NA	23615886	23596076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.4	chr11	-	5377	21	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-1	18	intron_retention	FALSE	canonical	2	3	junction_12	25.971907900653	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTTGATCTGACTTGTT	NA	False	NA	3	True	AATAAA	-27	NA	23583632	23523769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.40	chr11	-	3727	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	53	366	53	-366	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTTTTTTAAGATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	23615906	23596844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.41	chr11	-	3535	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	91	520	-16	-520	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAAGTCTTAGCCAATT	NA	False	NA	NA	False	ATTAAA	-33	NA	23615868	23596998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.42	chr11	-	4872	3	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-34	-540	intron_retention	FALSE	canonical	3	449	junction_2	6	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCATGTTCTACATCT	NA	False	NA	NA	False	ATTAAA	-13	NA	23615886	23597018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23601056_23605435_23606131_23615746
ES.4459.43	chr11	-	3257	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	83	806	-24	-806	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTCGGCCTGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	23615876	23597284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.44	chr11	-	3183	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	-14	977	-14	-977	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCTGTGTCCATTCTT	NA	False	NA	NA	False	NA	NA	NA	23615973	23597455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.45	chr11	-	2949	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	53	1144	53	-1144	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGGTTTGGGGTGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	23615906	23597622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.46	chr11	-	4243	3	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-16	-1151	intron_retention	FALSE	canonical	3	449	junction_2	6	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTATTTAGGTTTGGGG	NA	False	NA	NA	False	AATAAA	-11	NA	23615868	23597629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23601056_23605435_23606131_23615746
ES.4459.47	chr11	-	2463	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	86	1597	-21	1380	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACAGCTGTGGGTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	23615873	23598075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.48	chr11	-	2328	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	76	1742	-31	1235	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTTTTGTTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	23615883	23598220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.49	chr11	-	2111	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	91	1944	-16	1033	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCGGGGTTGGGGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	23615868	23598422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.5	chr11	-	4263	24	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	26	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	38.6066881577583	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCCTTGATCTGACTT	NA	False	NA	0	True	AATAAA	-24	NA	23583605	23523772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23581517_23581556_23581775_23581884_23583492
ES.4459.50	chr11	-	1932	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	93	2121	-14	856	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGATTTTTGTTCT	NA	False	NA	NA	False	AATATA	-29	NA	23615866	23598599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.51	chr11	-	1790	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	15	2341	15	636	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAGTGTTGAATTTAC	NA	False	NA	-1	True	AATAAA	-31	NA	23615944	23598819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.52	chr11	-	2177	4	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-29	633	intron_retention	FALSE	canonical	0	0	junction_3	210.181403131253	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTCCAGTGTTGAATT	NA	False	NA	-4	True	AATAAA	-28	NA	23615881	23598822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23599591_23600929_23601056_23605435_23606584_23615746
ES.4459.54	chr11	-	3050	3	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-16	633	intron_retention	FALSE	canonical	3	449	junction_2	6	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTCCAGTGTTGAATT	NA	False	NA	-4	True	AATAAA	-28	NA	23615868	23598822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23601056_23605435_23606131_23615746
ES.4459.55	chr11	-	2109	4	NNC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-21	633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	210.181403131253	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTCCAGTGTTGAATT	NA	False	NA	-4	True	AATAAA	-28	NA	23615873	23598822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23599591_23600929_23601056_23605435_23606131_23615353
ES.4459.56	chr11	-	2181	5	NNC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	34	633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	222.538058542803	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGTCCAGTGTTGAATT	NA	False	NA	-4	True	AATAAA	-28	NA	23615639	23598822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23599591_23600929_23601056_23605435_23606131_23606385_23606584_23615245
ES.4459.57	chr11	-	3826	1	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	12991	599	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACTAAATAATAAAA	NA	False	NA	-38	True	NA	NA	NA	23602682	23598856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23598900_23602700
ES.4459.58	chr11	-	1636	4	NNC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	3	599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	210.181403131253	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACTAAATAATAAAA	NA	False	NA	-38	True	NA	NA	NA	23615849	23598856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23599591_23600929_23601056_23605435_23606131_23615768
ES.4459.59	chr11	-	1225	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	16	2905	16	72	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCCTTTGAATCTGTT	NA	False	NA	NA	False	ATTAAA	-35	NA	23615943	23599383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ES.4459.6	chr11	-	4066	21	NIC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	-11	13	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	26.5628970558559	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTCCCTTGATCTGAC	NA	False	NA	-2	True	AATAAA	-22	NA	23583650	23523774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.60	chr11	-	8546	1	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	3588	2293	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23612085	23603539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23603500_23612100
ES.4459.61	chr11	-	2774	2	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	29	7062	29	2292	5prime_fragment	FALSE	canonical	3	449	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23615930	23603540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_23606131_23615746
ES.4459.62	chr11	-	1636	1	NIC	ENSMUSG00000020283.6	novel	4146	4	NA	NA	-33	-8164	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTATATAATACCTAGG	NA	False	NA	NA	False	NA	NA	NA	23615885	23614249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23614200_23615900
ES.4459.7	chr11	-	5305	21	ISM	ENSMUSG00000042208.16	ENSMUST00000155903.8	2569	23	-34	8815	-34	12	5prime_fragment	FALSE	canonical	3	83	junction_11	10.0462679637764	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGTCCCTTGATCTGA	NA	False	NA	-3	True	AATAAA	-21	NA	23583583	23523775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.8	chr11	-	4184	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	-46	-10	-38	10	multi-exon	FALSE	canonical	3	83	junction_12	9.91208520476776	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAAAGTCCCTTGATCT	NA	False	NA	-5	True	AATAAA	-19	NA	23583677	23523777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.4459.9	chr11	-	4150	22	NNC	ENSMUSG00000042208.16	novel	4128	22	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	25.34774026433	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAGAAAGTCCCTTGA	NA	False	NA	-8	True	AATAAA	-16	NA	23583629	23523780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561944_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ES.446.1	chr1	-	4907	4	Genic_Genomic	ENSMUSG00000097833.2	novel	996	1	NA	NA	-13423	1882	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTCTTCTCAAAGAATG	NA	False	NA	NA	False	CATAAA	-16	NA	52556811	52540510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_52543436_52554221_52554316_52554454_52556201_52556669
ES.446.2	chr1	-	3399	4	Genic_Genomic	ENSMUSG00000097833.2	novel	996	1	NA	NA	-13393	404	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTCCTTAGCTTTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	52556781	52541988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_52543436_52554221_52554316_52554454_52556201_52556669
ES.4460.1	chr11	+	3582	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.8359766893479	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23615980	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649969_23652896_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.10	chr11	+	2305	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	161	1093	-20	258	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTGTCCTATAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	23616167	23681783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.11	chr11	+	3446	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	48.9279535304533	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	False	NA	3	True	ATTAAA	-10	NA	23616173	23682869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23658757_23658823_23661195_23661282_23662199_23662326_23666813_23666921_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.13	chr11	+	5451	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	8	-338	intron_retention	FALSE	canonical	0	0	junction_10	51.8709471256246	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATCAGCTAGTGCAAC	NA	False	NA	6	True	AATAAA	-19	NA	23616195	23682538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23661282_23662199_23662326_23666813_23666874_23667561_23667619_23668579_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.15	chr11	+	3011	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	25	-332	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTAGTGCAACTTCTTG	NA	False	NA	12	True	AATAAA	-25	NA	23616212	23682544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.16	chr11	+	3532	19	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	40.6592282207394	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATTGTTTTTT	NA	False	NA	7	True	ATTAAA	-14	NA	23616220	23682873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23659882_23660073_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.17	chr11	+	4552	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-118	0	intron_retention	FALSE	canonical	0	0	junction_9	41.6522927917502	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616392	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23658823_23659882_23660073_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.18	chr11	+	3388	19	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-111	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.3549110427124	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	False	NA	3	True	ATTAAA	-10	NA	23616399	23682869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23659882_23660073_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
ES.4460.19	chr11	+	4785	17	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-111	0	intron_retention	FALSE	canonical	0	0	junction_7	33.0368520556968	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616399	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23658612_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.2	chr11	+	3586	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	-26	-1	-26	1	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGCATTGTTTTTTTTTT	NA	False	NA	11	True	ATTAAA	-18	NA	23615980	23682877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.20	chr11	+	2857	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-111	-338	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.7383905820676	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATCAGCTAGTGCAAC	NA	False	NA	6	True	AATAAA	-19	NA	23616399	23682538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
ES.4460.21	chr11	+	2051	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-100	257	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGAGTGTCCTATAATA	NA	False	NA	NA	False	AATAAA	-20	NA	23616410	23681782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.22	chr11	+	3146	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	32.5126539113598	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616427	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678966_23679075_23681320
ES.4460.23	chr11	+	3138	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.02183511099	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616448	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616475_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.24	chr11	+	3177	18	NIC	ENSMUSG00000020280.13	novel	592	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	31.6004467578248	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616484	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616550_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.25	chr11	+	6568	17	NIC	ENSMUSG00000020280.13	novel	592	6	NA	NA	-24	-7	intron_retention	FALSE	canonical	1	2	junction_1	32.5719755886867	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	False	NA	3	True	ATTAAA	-10	NA	23616486	23682869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616550_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23679075_23681320
ES.4460.26	chr11	+	2866	18	NNC	ENSMUSG00000020280.13	novel	592	6	NA	NA	-18	-342	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.120234520664	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTCATCAGCTAGTG	NA	False	NA	2	True	AATAAA	-15	NA	23616492	23682534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616550_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
ES.4460.27	chr11	+	4204	9	ISM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	43302	2	-8173	-2	3prime_fragment	FALSE	canonical	3	104	junction_1	12.3389626792531	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGCATTGTTTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	23659308	23682874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.28	chr11	+	5539	6	FSM	ENSMUSG00000020280.13	ENSMUST00000142287.2	592	6	-4570	-377	-3496	250	multi-exon	FALSE	canonical	3	114	junction_4	10.4192130221049	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATGTAGAAGAGTGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	23663985	23681775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.29	chr11	+	5914	6	FSM	ENSMUSG00000020280.13	ENSMUST00000142287.2	592	6	-4182	-1140	-3108	-338	multi-exon	FALSE	canonical	3	114	junction_4	10.4192130221049	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATCAGCTAGTGCAAC	NA	False	NA	6	True	AATAAA	-19	NA	23664373	23682538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.3	chr11	+	3620	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	30.4802392165639	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGCATTGTTTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	23615983	23682875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
ES.4460.30	chr11	+	3837	7	ISM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	49823	2	-1652	-2	3prime_fragment	FALSE	canonical	3	114	junction_5	9.88264472024906	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGCATTGTTTTTTT	210	False	NA	8	True	ATTAAA	-15	NA	23665829	23682874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.31	chr11	+	3938	6	FSM	ENSMUSG00000020280.13	ENSMUST00000142287.2	592	6	-1871	-1475	-797	-3	multi-exon	FALSE	canonical	3	114	junction_4	10.4192130221049	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATTGTTTTTT	197	False	NA	7	True	ATTAAA	-14	NA	23666684	23682873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.32	chr11	+	4915	3	NIC	ENSMUSG00000020280.13	novel	592	6	NA	NA	1615	-335	intron_retention	FALSE	canonical	3	132	junction_2	5.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGCTAGTGCAACTTC	3683	False	NA	9	True	AATAAA	-22	NA	23670170	23682541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23670222_23675431_23679075_23681320
ES.4460.33	chr11	+	154	1	Intergenic	novelGene_3441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATATTTTA	NA	False	NA	NA	False	NA	NA	NA	23680577	23680731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23680600_23680700
ES.4460.4	chr11	+	4764	17	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	91	junction_1	14.7266764750231	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGCATTGTTTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	23615988	23682874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.5	chr11	+	3481	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616074	23682876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.6	chr11	+	3101	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	126	332	-55	-332	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTAGTGCAACTTCTTG	NA	False	NA	12	True	AATAAA	-25	NA	23616132	23682544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.7	chr11	+	3441	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-41	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.7383905820676	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	False	NA	3	True	ATTAAA	-10	NA	23616146	23682869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
ES.4460.8	chr11	+	3277	17	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-38	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.9902921326865	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGCATTGTTTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	23616149	23682874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_23616454_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ES.4460.9	chr11	+	3371	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	41.6519604958613	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGCATTGTTTTTTT	NA	False	NA	8	True	ATTAAA	-15	NA	23616152	23682874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23676553_23676614_23681320
ES.4461.1	chr11	-	156	1	Intergenic	novelGene_3440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	23651652	23651496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23651500_23651700
ES.4462.1	chr11	+	177	1	Intergenic	novelGene_3443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATTTCAGA	NA	False	NA	NA	False	NA	NA	NA	23717600	23717777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23717600_23717800
ES.4463.1	chr11	-	7534	10	FSM	ENSMUSG00000020275.10	ENSMUST00000102864.5	7466	10	-68	0	-68	0	multi-exon	FALSE	canonical	0	0	junction_6	1.22726233524303	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTACAGTTTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	23721038	23686846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23693041_23694238_23694308_23694436_23694506_23695428_23695642_23695745_23695851_23698750_23698892_23703216_23703309_23706898_23707048_23711012_23711156_23720679
ES.4463.2	chr11	-	2836	11	NNC	ENSMUSG00000020275.10	novel	7466	10	NA	NA	-30	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.6	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGTTACAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	23721000	23686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23688311_23690716_23690792_23694238_23694308_23694436_23694506_23695428_23695642_23695745_23695851_23698750_23698892_23703216_23703309_23706898_23707048_23711012_23711156_23720679
ES.4463.3	chr11	-	155	1	Intergenic	novelGene_3442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCCTAAG	NA	False	NA	NA	False	NA	NA	NA	23701604	23701449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_23701400_23701600
ES.4464.1	chr11	+	224	1	Intergenic	novelGene_3444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGGTATTATAGG	NA	False	NA	NA	False	AAAAAG	-30	NA	23838089	23838313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23838100_23838300
ES.4465.1	chr11	-	8435	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	10	-4698	-7	4698	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTATTTTAAACAACTC	1279	False	NA	NA	False	NA	NA	NA	23845243	23807947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.10	chr11	-	3647	22	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	36.1825179219828	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	1366	False	NA	-1	True	TTTAAA	-8	NA	23845156	23812645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818474_23820188_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.11	chr11	-	3713	21	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	38.9428748296784	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTGTCTTTAATTTTT	1248	False	NA	-2	True	TTTAAA	-7	NA	23845274	23812646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.12	chr11	-	3720	22	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.0769599007516	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTGTCTTTAATTTTT	1289	False	NA	-2	True	TTTAAA	-7	NA	23845233	23812646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817585_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.14	chr11	-	5880	20	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	0	-2	intron_retention	FALSE	canonical	3	117	junction_1	14.0389249140517	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTTTAATTTT	1286	False	NA	-3	True	TTTAAA	-6	NA	23845236	23812647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.15	chr11	-	4069	23	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-32670	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	47.8741678822016	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTTTAATTTT	NA	False	NA	-3	True	TTTAAA	-6	NA	23877923	23812647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23851200_23851376_23877542
ES.4465.16	chr11	-	3700	22	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.4796089685495	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCTGTCTTTAATTT	1277	False	NA	-4	True	TTTAAA	-5	NA	23845245	23812648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817383_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.17	chr11	-	3695	21	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_19	37.3548858919419	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	1250	False	NA	-5	True	TTTAAA	-4	NA	23845272	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23841742_23841905_23845021
ES.4465.18	chr11	-	3892	22	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-32670	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	38.0727910057299	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	NA	False	NA	-5	True	TTTAAA	-4	NA	23877923	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23877542
ES.4465.19	chr11	-	3641	21	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	36.543262032829	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	1261	False	NA	-5	True	TTTAAA	-4	NA	23845261	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.2	chr11	-	7108	23	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-21	3529	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	36.478483412364	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGGACTCTATAACTC	1248	False	NA	NA	False	NA	NA	NA	23845274	23809116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23809495_23809683_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.20	chr11	-	6260	19	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	1	-4	intron_retention	FALSE	canonical	3	117	junction_1	14.2769130736858	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	1270	False	NA	-5	True	TTTAAA	-4	NA	23845252	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23818127_23818358_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.21	chr11	-	3744	22	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	38.069455561014	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	1286	False	NA	-5	True	TTTAAA	-4	NA	23845236	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822499_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.22	chr11	-	4107	21	NIC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	2	-4	intron_retention	FALSE	canonical	3	117	junction_1	18.9087281433734	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTCTGTCTTTAATT	1271	False	NA	-5	True	TTTAAA	-4	NA	23845251	23812649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.23	chr11	-	3034	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-7	720	-7	-720	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGCACATGAATATTTAAA	1262	False	NA	NA	False	TTTAAA	-15	NA	23845260	23813365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.24	chr11	-	2874	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	21	852	4	-852	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTTTATGTGTTTACT	1290	False	NA	NA	False	AAAAAG	-42	NA	23845232	23813497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.25	chr11	-	3168	21	ISM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	7	2926	7	-328	5prime_fragment	FALSE	canonical	3	119	junction_7	16.7955351209778	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTGACTTACTTAGAT	1276	False	NA	NA	False	AAGAAA	-1	NA	23845246	23815571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.26	chr11	-	2689	22	NNC	ENSMUSG00000020273.14	novel	1882	18	NA	NA	1	-354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4082702728589	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATTGAAAAAAAA	1287	False	NA	NA	False	NA	NA	NA	23845235	23815597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23815969_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.27	chr11	-	6142	2	NIC	ENSMUSG00000020273.14	novel	2171	14	NA	NA	-5	-15927	intron_retention	FALSE	canonical	3	152	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	1281	False	NA	NA	False	NA	NA	NA	23845241	23835982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_23841905_23845021
ES.4465.28	chr11	-	6411	2	NNC	ENSMUSG00000020273.14	novel	2171	14	NA	NA	1	-15927	intron_retention	FALSE	canonical	2	4	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	1287	False	NA	NA	False	NA	NA	NA	23845235	23835982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23841905_23844746
ES.4465.3	chr11	-	4424	10	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-11492	2506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	52.4364400671287	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTGATATTATTTG	NA	False	NA	NA	False	AATAAA	-22	NA	23829962	23810139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23813645_23818352_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873
ES.4465.4	chr11	-	6260	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-10	-2503	-10	2503	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTGAGTGATATTAT	1259	False	NA	NA	False	AATAAA	-19	NA	23845263	23810142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.5	chr11	-	4513	23	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	-8	2499	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	36.478483412364	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGATGTTTGAGTGATA	1261	False	NA	NA	False	AATAAA	-15	NA	23845261	23810146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23812196_23813936_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.7	chr11	-	6059	23	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	3	2496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.2037332615296	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATGATGTTTGAGTG	1272	False	NA	NA	False	AATAAA	-12	NA	23845250	23810149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23811445_23811625_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.8	chr11	-	3802	24	NNC	ENSMUSG00000020273.14	novel	3747	22	NA	NA	2	2496	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	46.7349037522648	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATGATGTTTGAGTG	1288	False	NA	NA	False	AATAAA	-12	NA	23845234	23810149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_23811443_23811625_23811698_23813936_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4465.9	chr11	-	3785	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	-38	0	-38	0	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	1231	False	NA	-1	True	TTTAAA	-8	NA	23845291	23812645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ES.4466.1	chr11	+	177	1	Intergenic	novelGene_3445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTACTTCAGA	NA	False	NA	NA	False	NA	NA	NA	23884231	23884408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23884200_23884400
ES.4467.1	chr11	+	178	1	Intergenic	novelGene_3446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAGCTAAGAGT	6393	False	NA	NA	False	NA	NA	NA	23901192	23901370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_23901200_23901400
ES.4468.1	chr11	+	177	1	Intergenic	novelGene_3447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTCATAGTAG	1625	False	NA	NA	False	NA	NA	NA	24159930	24160107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_24159900_24160100
ES.4469.1	chr11	+	180	1	Intergenic	novelGene_3448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGTAAGATGGAGGA	NA	False	NA	NA	False	NA	NA	NA	24285892	24286072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_24285900_24286100
ES.447.1	chr1	-	209	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATGGATATCCGCATG	NA	False	NA	NA	False	NA	NA	NA	52639654	52639445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52639400_52639700
ES.4470.1	chr11	+	181	1	Intergenic	novelGene_3449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGACTTAAT	NA	False	NA	NA	False	NA	NA	NA	24797302	24797483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_24797300_24797500
ES.4471.1	chr11	-	175	1	Intergenic	novelGene_3450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAGAGTTTATA	NA	False	NA	NA	False	NA	NA	NA	25089180	25089005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_25089000_25089200
ES.4472.1	chr11	+	175	1	Intergenic	novelGene_3451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	25357727	25357902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_25357700_25357900
ES.4473.1	chr11	-	1543	1	Intergenic	novelGene_3452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATATTTGCCTCCTC	NA	False	NA	NA	False	ATTAAA	-5	NA	25565496	25563953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_25564000_25565500
ES.4474.1	chr11	-	2875	1	Intergenic	novelGene_3453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25660597	25657722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_25657700_25660600
ES.4475.1	chr11	-	3315	1	Intergenic	novelGene_3454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAACCAGCA	NA	False	NA	NA	False	NA	NA	NA	25935294	25931979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_25932000_25935300
ES.4476.1	chr11	-	174	1	Intergenic	novelGene_3455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	25973838	25973664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_25973700_25973800
ES.4477.1	chr11	+	1147	1	Intergenic	novelGene_3456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	26014759	26015906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26014800_26015900
ES.4478.1	chr11	+	2861	1	Intergenic	novelGene_3457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGACACAGTGGTCGAG	NA	False	NA	NA	False	NA	NA	NA	26093310	26096171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26093300_26096200
ES.4479.1	chr11	+	158	1	Intergenic	novelGene_3458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	26222482	26222640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26222500_26222600
ES.448.1	chr1	-	170	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCATAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	52665867	52665697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_52665700_52665900
ES.4480.1	chr11	+	178	1	Intergenic	novelGene_3459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	26244628	26244806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26244600_26244800
ES.4481.1	chr11	+	1536	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	715	473	-352	-18	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAAAGCAA	NA	False	NA	-15	True	NA	NA	NA	26336849	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.10	chr11	+	1668	14	NNC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	90.9673197056936	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATCGAGGCATTTATT	NA	False	NA	18	True	AATATA	-14	NA	26337201	26421815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420806_26420949_26421322
ES.4481.11	chr11	+	1182	9	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	82.8703807159108	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAGTCATTAACACCC	NA	False	NA	13	True	AATAAA	-15	NA	26337201	26421876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.12	chr11	+	3160	11	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	7	-4	intron_retention	FALSE	canonical	3	204	junction_1	22.8300240910955	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTATTTGATGACTTC	NA	False	NA	8	True	AATAAA	-15	NA	26337208	26421426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26420949_26421324
ES.4481.13	chr11	+	4035	9	NNC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	18237	-4	intron_retention	FALSE	canonical	0	0	junction_3	108.688128951602	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTATTTGATGACTTC	NA	False	NA	8	True	AATAAA	-15	NA	26355438	26421426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_26357649_26372407_26372505_26384431_26384501_26391795_26391949_26409685_26409837_26418334_26418419_26418671_26419769_26420876_26420949_26421324
ES.4481.14	chr11	+	3536	8	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	33023	0	intron_retention	FALSE	canonical	3	239	junction_7	15.9091810228034	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAGTCATTAACACCC	NA	False	NA	13	True	AATAAA	-15	NA	26370224	26421876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.15	chr11	+	3771	5	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	34553	81	intron_retention	FALSE	canonical	3	239	junction_4	19.4084388862165	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGCCTTTGTCTCTTC	NA	False	NA	93	True	AATATA	-19	NA	26371754	26421511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26372505_26384431_26384501_26409685_26409837_26418334_26420949_26421324
ES.4481.16	chr11	+	179	1	Intergenic	novelGene_3461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAGCAAATAGT	NA	False	NA	NA	False	NA	NA	NA	26408670	26408849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26408700_26408800
ES.4481.17	chr11	+	6934	6	ISM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	75773	446	-6427	0	3prime_fragment	FALSE	canonical	3	239	junction_5	10.8148046676766	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGATGACTTCAGAG	NA	False	NA	12	True	AATAAA	-19	NA	26411907	26421430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.18	chr11	+	2749	2	NIC	ENSMUSG00000004018.10	novel	577	6	NA	NA	396	-21	intron_retention	FALSE	canonical	3	239	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAACATACCAAG	6633	False	NA	-8	True	NA	NA	NA	26418730	26421855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26420949_26421324
ES.4481.2	chr11	+	1277	14	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-23	-18	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	67.663367939726	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAAAGCAA	NA	False	NA	-15	True	NA	NA	NA	26337178	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420806_26420949_26421324
ES.4481.3	chr11	+	1620	13	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	2	2	junction_3	71.9477047738302	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAGTCATTAACACCC	NA	False	NA	13	True	AATAAA	-15	NA	26337181	26421876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.4	chr11	+	1621	14	NNC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-10	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.488835253241	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAACATACCAAG	NA	False	NA	-8	True	NA	NA	NA	26337191	26421855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_26337286_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.5	chr11	+	2470	5	NNC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-10	-16094	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.304536288246	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTAGTTGTTACGTCT	NA	False	NA	NA	False	TATAAA	-22	NA	26337191	26356366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26354192
ES.4481.6	chr11	+	1129	13	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	-2	-18	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	71.9477047738302	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAAAGCAA	NA	False	NA	-15	True	NA	NA	NA	26337199	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.7	chr11	+	1026	12	NIC	ENSMUSG00000004018.10	novel	2724	14	NA	NA	0	-18	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	74.9367777607032	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAAAGCAA	NA	False	NA	-15	True	NA	NA	NA	26337201	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.8	chr11	+	1657	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAGTCATTAACACCC	NA	False	NA	13	True	AATAAA	-15	NA	26337201	26421876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ES.4481.9	chr11	+	1267	13	NIC	ENSMUSG00000004018.10	novel	1187	14	NA	NA	0	-18	intron_retention	FALSE	canonical	3	204	junction_1	21.6140386477555	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACAAAAGCAA	NA	False	NA	-15	True	NA	NA	NA	26337201	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418883_26419651_26419769_26420876_26420949_26421324
ES.4482.1	chr11	-	688	1	Antisense	novelGene_ENSMUSG00000004018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTTGTACTGTTTT	NA	False	NA	0	True	AATAAA	-36	NA	26337431	26336743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_26336700_26337400
ES.4483.1	chr11	-	2626	1	Intergenic	novelGene_3460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGCGGGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	26364696	26362070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_26362100_26364700
ES.4483.2	chr11	-	4541	2	Antisense	novelGene_ENSMUSG00000004018.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	26369131	26362095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_26362195_26364689
ES.4484.1	chr11	-	5788	14	NNC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	2	10511	intron_retention	FALSE	non_canonical	0	0	junction_1	30.3102302724938	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCAGTCTTAGCATCT	NA	False	NA	NA	False	AATAAA	-24	NA	26543620	26410810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_26411455_26417848_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ES.4484.11	chr11	-	4383	10	NNC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	2	-12061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.1244700324678	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATAGACTTTTTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	26543620	26433464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_26437019_26439772_26439894_26448920_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ES.4484.12	chr11	-	3044	1	Intergenic	novelGene_3462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	26469707	26466663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_26466700_26469700
ES.4484.2	chr11	-	3833	2	NNC	ENSMUSG00000064090.15	novel	1642	12	NA	NA	77976	10159	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAATATATGGTA	NA	False	NA	NA	False	AATAAA	-37	NA	26421389	26411162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_26411455_26417848
ES.4484.3	chr11	-	5212	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-49	3286	intron_retention	FALSE	canonical	0	0	junction_12	30.8175635348128	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGGCCTTTAGTATAT	NA	False	NA	NA	False	AATAAA	-16	NA	26543671	26418035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
ES.4484.4	chr11	-	1737	13	NNC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	8	76	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.3221389577546	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGTTTTTCTTAGAA	NA	False	NA	NA	False	ATTAAA	-16	NA	26543614	26421245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484300_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ES.4484.5	chr11	-	1683	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	206	0	-92	0	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543714	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ES.4484.6	chr11	-	2124	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543951	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
ES.4484.8	chr11	-	1605	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	27.6777086399065	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26544000	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543953
ES.4484.9	chr11	-	1890	14	NNC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	45.204728244082	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543635	26421403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26540337_26540420_26541586_26541728_26543385
ES.4485.1	chr11	+	202	1	Intergenic	novelGene_3463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTCTACATGTGTG	7470	False	NA	NA	False	TTTAAA	-8	NA	26823771	26823973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_26823800_26824000
ES.4486.1	chr11	-	2020	3	Antisense	novelGene_ENSMUSG00000083895.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAAGGTGTTACATAA	NA	False	NA	NA	False	AATAAA	-28	NA	27015051	26998140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_26999933_27014225_27014342_27014939
ES.4487.1	chr11	+	135	1	Intergenic	novelGene_3464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	866	False	NA	NA	False	NA	NA	NA	27927907	27928042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_27927900_27928000
ES.4488.1	chr11	+	5299	2	Intergenic	novelGene_3465	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCATCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	28117210	28122615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_28117239_28117344
ES.4489.1	chr11	-	4093	6	FSM	ENSMUSG00000032878.17	ENSMUST00000146385.9	3798	6	-292	-3	9	3	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTGTTTTGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	28534287	28337148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_28338949_28346045_28346166_28349375_28349511_28384080_28384158_28526390_28527346_28533281
ES.4489.2	chr11	-	3677	5	FSM	ENSMUSG00000032878.17	ENSMUST00000093253.10	5431	5	290	1464	-11	3	multi-exon	TRUE	canonical	0	0	junction_1	1.08972473588517	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTGTTTTGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	28534006	28337148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_28338949_28346045_28346166_28384080_28384158_28526390_28527346_28533281
ES.4489.3	chr11	-	3606	4	FSM	ENSMUSG00000032878.17	ENSMUST00000042534.15	5332	4	265	1461	-64	-1	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATTTTTGTCTGTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	28534059	28337152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_28338949_28384080_28384158_28526390_28527346_28533281
ES.4489.4	chr11	-	2049	1	Intergenic	novelGene_3466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATGAATTTCTGGACC	NA	False	NA	NA	False	NA	NA	NA	28492494	28490445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_28490400_28492500
ES.4489.5	chr11	-	3810	2	FSM	ENSMUSG00000032878.17	ENSMUST00000109501.2	3134	2	2	-678	2	678	multi-exon	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATGTTTGTCTATTCT	NA	False	NA	NA	False	NA	NA	NA	28534264	28524518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_28527346_28533281
ES.449.1	chr1	+	3353	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-47	-1283	-3	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669858	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.10	chr1	+	4582	6	NIC	ENSMUSG00000043015.16	novel	3396	9	NA	NA	-1429	0	intron_retention	FALSE	canonical	3	31	junction_1	5.63560112144215	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52679245	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52680220_52680329_52680403_52681477_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.11	chr1	+	8384	2	ISM	ENSMUSG00000043015.16	ENSMUST00000190108.7	3507	4	12006	-1191	774	1	3prime_fragment	FALSE	canonical	3	41	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCGAGTCAGTGT	NA	False	NA	10	True	ATTAAA	-21	NA	52681916	52691079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52688086_52688864
ES.449.12	chr1	+	3538	1	NIC	ENSMUSG00000043015.16	novel	3396	9	NA	NA	-277	-1586	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAGACAAAGTAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	52684062	52687600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52684100_52687600
ES.449.2	chr1	+	2881	5	FSM	ENSMUSG00000043015.16	ENSMUST00000185790.7	1571	5	-94	-1216	0	-1	multi-exon	FALSE	canonical	1	5	junction_2	17.1537167984084	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGGCTCCGAGTCAGT	NA	False	NA	8	True	ATTAAA	-19	NA	52669861	52691077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52684419_52684646_52687908_52688086_52688864
ES.449.3	chr1	+	3374	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	22	0	-12	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669883	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.4	chr1	+	1744	5	FSM	ENSMUSG00000043015.16	ENSMUST00000185790.7	1571	5	-62	-111	-2	84	multi-exon	FALSE	canonical	1	5	junction_2	17.1537167984084	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTGTTTTGTT	NA	False	NA	NA	False	AATAGA	-14	NA	52669893	52689972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52684419_52684646_52687908_52688086_52688864
ES.449.5	chr1	+	2070	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	43	1283	-1	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAATGTTTTGATAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	52669904	52689795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.6	chr1	+	4417	6	NIC	ENSMUSG00000043015.16	novel	3247	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_3	18.2756668824971	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669910	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_52670011_52676523_52676640_52679987_52681572_52684419_52684646_52687908_52688086_52688864
ES.449.7	chr1	+	2017	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	5	1	0	-1	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTAATGTTTTGATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	52669910	52689794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.8	chr1	+	6992	4	FSM	ENSMUSG00000043015.16	ENSMUST00000186903.7	4338	4	-2654	0	-2654	0	multi-exon	FALSE	canonical	3	36	junction_1	4.08248290463863	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52678020	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52682396_52684419_52684646_52687908_52688086_52688864
ES.449.9	chr1	+	7954	3	FSM	ENSMUSG00000043015.16	ENSMUST00000191076.2	805	3	-5257	-1892	-1592	0	multi-exon	FALSE	canonical	3	41	junction_2	2.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52679082	52691078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52684646_52687908_52688086_52688864
ES.4490.1	chr11	+	179	1	Intergenic	novelGene_3467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28795741	28795920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_28795700_28795900
ES.4491.1	chr11	+	1992	11	FSM	ENSMUSG00000020467.16	ENSMUST00000020759.12	2037	11	35	10	-5	-10	multi-exon	FALSE	canonical	0	0	junction_10	1.00498756211209	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGAATCTGCCATGT	NA	False	NA	NA	False	AATAAA	-16	NA	28803238	28876733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_28803325_28804464_28804555_28817465_28817515_28817652_28818040_28860609_28860733_28864587_28864708_28865660_28865781_28866849_28866970_28871402_28871527_28871610_28871807_28876156
ES.4492.1	chr11	+	1090	1	Intergenic	novelGene_3468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCATAGCTGGCCTCTA	NA	False	NA	NA	False	NA	NA	NA	29019759	29020849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29019800_29020800
ES.4493.1	chr11	+	3049	1	Intergenic	novelGene_3469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGATTCTGGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	29076669	29079718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29076700_29079700
ES.4494.1	chr11	+	2618	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-43	132	-39	16	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGAGAACCTTTCTGT	NA	False	NA	24	True	AATAAA	-36	NA	29080704	29111696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.12	chr11	+	4675	26	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	128.474844230301	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080743	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083832_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.14	chr11	+	2533	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	159.252962838496	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080743	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.17	chr11	+	3450	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	770	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	188.930111696426	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATTTAGTAGTGACC	NA	False	NA	NA	False	AATGAA	-18	NA	29080743	29112598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.18	chr11	+	2547	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	166.068036035212	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCAGGAGCAACCTATA	NA	False	NA	22	True	ATTAAA	-19	NA	29080743	29111608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088661_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.19	chr11	+	3204	26	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	-93	intron_retention	FALSE	canonical	2	2	junction_13	126.779014036236	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCATGTGCCTTTT	NA	False	NA	1	True	NA	NA	NA	29080743	29111587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.2	chr11	+	5151	25	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-30	-8	intron_retention	FALSE	canonical	3	488	junction_10	51.0046294195166	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080713	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.20	chr11	+	1850	20	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	190.527653382917	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080743	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.21	chr11	+	8788	24	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	-3	intron_retention	FALSE	canonical	3	488	junction_10	50.1493044918949	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080743	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.22	chr11	+	3109	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-67	intron_retention	FALSE	canonical	0	0	junction_18	127.767424615586	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGGATCTTTTTTATA	NA	False	NA	89	True	AATAGA	-13	NA	29080743	29111761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.23	chr11	+	4316	26	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-8	intron_retention	FALSE	canonical	0	0	junction_17	128.416858706324	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080743	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.25	chr11	+	2570	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.971513248137	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080743	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080929_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.26	chr11	+	3255	15	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	-1417	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	215.197725881315	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAGATGTTCAGGATAC	NA	False	NA	NA	False	AATAAA	-15	NA	29080743	29094053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29091945_29092101_29092143
ES.4494.27	chr11	+	2893	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-4	-182	0	182	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGCTAGAGTAACTTGG	NA	False	NA	NA	False	TATAAA	-6	NA	29080743	29112010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.28	chr11	+	3222	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	595	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	165.773482901024	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTTTGATTTGGGATT	NA	False	NA	NA	False	TATAAA	-10	NA	29080743	29112423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.3	chr11	+	7059	24	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-15	-11	intron_retention	FALSE	canonical	3	488	junction_9	50.94142082223	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAATAAGCTATTTTT	NA	False	NA	-3	True	AATAAA	-9	NA	29080728	29111669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.30	chr11	+	2487	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	169.008822990164	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAATAAGCTATTTTT	NA	False	NA	-3	True	AATAAA	-9	NA	29080743	29111669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.31	chr11	+	4451	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-8	intron_retention	FALSE	non_canonical	0	0	junction_17	216.32272351757	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080743	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088661_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29103936_29104015_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106835_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.33	chr11	+	2979	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	349	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	169.537100371473	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGATAACTGTCAAATC	NA	False	NA	NA	False	TATAAA	-25	NA	29080743	29112177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.34	chr11	+	5237	24	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	132.76105289	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGCTTGCCTACTAT	NA	False	NA	NA	False	NA	NA	NA	29080743	29111827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103338_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.35	chr11	+	3856	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_18	126.004296911799	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080743	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.36	chr11	+	2467	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-2	242	-2	-94	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGATCATGTGCCTTT	NA	False	NA	0	True	NA	NA	NA	29080745	29111586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.37	chr11	+	5232	26	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-2	-70	intron_retention	FALSE	canonical	0	0	junction_8	169.907739670681	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGAGCAACCTATATT	NA	False	NA	24	True	ATTAAA	-21	NA	29080745	29111610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088649_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097331_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.38	chr11	+	4295	26	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_17	163.401904517665	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080745	29111680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.39	chr11	+	2708	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-2	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGCTTGCCTACTAT	NA	False	NA	NA	False	NA	NA	NA	29080745	29111827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.4	chr11	+	3463	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-16	-740	-12	740	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGAAAATGAACAATTAT	NA	False	NA	NA	False	AAAACA	-43	NA	29080731	29112568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.41	chr11	+	2518	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	164.740049625515	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080746	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097331_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.42	chr11	+	2671	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	164.740049625515	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTGCTTGCCTACT	NA	False	NA	NA	False	NA	NA	NA	29080746	29111825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097331_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.44	chr11	+	2468	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	165.773482901024	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080746	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.45	chr11	+	2568	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197.673318231725	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080746	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083836_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097296_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.47	chr11	+	2459	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	196.117688975253	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080746	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084684_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.50	chr11	+	3280	27	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	644	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	127.87817797563	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTAAGGTATGTTTAT	NA	False	NA	NA	False	TTTAAA	-22	NA	29080746	29112472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.51	chr11	+	2542	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	166.903017599894	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080746	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104201_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.52	chr11	+	4615	26	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-1	-59	intron_retention	FALSE	canonical	0	0	junction_13	169.323434881295	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATATTTGCTTATTCTT	NA	False	NA	35	True	ATTAAA	-32	NA	29080746	29111621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091770_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107091_29109324_29109404_29110157_29110206_29111327
ES.4494.53	chr11	+	3016	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1	22	intron_retention	FALSE	canonical	0	0	junction_18	192.508986956899	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACCTTTCTGTTCCTAT	NA	False	NA	30	True	AATAAA	-42	NA	29080746	29111702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.54	chr11	+	4747	25	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-1	0	intron_retention	FALSE	canonical	3	488	junction_10	51.7839394879232	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080746	29111680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.55	chr11	+	3057	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	-1	-349	-1	349	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGATAACTGTCAAATC	NA	False	NA	NA	False	TATAAA	-25	NA	29080746	29112177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.58	chr11	+	8698	24	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	3	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	176.255571443936	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080750	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29089276_29089947_29090006_29091223_29091321_29091663_29092092_29092135_29097365_29097443_29097534_29098277_29098332_29103231_29103343_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.59	chr11	+	6782	23	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	3	745	intron_retention	FALSE	canonical	3	488	junction_8	49.2577132442178	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAATTATTTCTA	NA	False	NA	NA	False	NA	NA	NA	29080750	29112573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.6	chr11	+	2454	26	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	168.12912180821	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080741	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.60	chr11	+	2548	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	166.608195504687	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080750	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106950_29107030_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.62	chr11	+	6990	26	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	3	644	intron_retention	FALSE	non_canonical	0	0	junction_1	170.324095770387	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTAAGGTATGTTTAT	NA	False	NA	NA	False	TTTAAA	-22	NA	29080750	29112472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29081759_29081803_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.63	chr11	+	3362	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	3	-67	intron_retention	FALSE	canonical	0	0	junction_17	197.581550595703	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGGATCTTTTTTATA	NA	False	NA	89	True	AATAGA	-13	NA	29080750	29111761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29102456_29102563_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.64	chr11	+	2405	27	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	217.233687194392	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCTATTTTTATAT	NA	False	NA	1	True	AATAAA	-13	NA	29080750	29111673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091770_29095433_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103343_29104148_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.65	chr11	+	4555	25	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	3	-64	intron_retention	FALSE	canonical	0	0	junction_16	130.05615774221	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAACCTATATTTGCTTA	NA	False	NA	30	True	ATTAAA	-27	NA	29080750	29111616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.67	chr11	+	3046	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	4	370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	159.252962838496	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGCCTTTTTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	29080751	29112198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.68	chr11	+	3395	27	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	4	-9	intron_retention	FALSE	canonical	0	0	junction_9	127.116315602316	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAAGCTATTTTTAT	NA	False	NA	-1	True	AATAAA	-11	NA	29080751	29111671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088649_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.69	chr11	+	3306	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	4	-603	4	603	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGGGATTTATTTAAA	NA	False	NA	NA	False	TATAAA	-18	NA	29080751	29112431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.7	chr11	+	1149	9	ISM	ENSMUSG00000020464.16	ENSMUST00000154924.8	3368	27	-1	22808	-1	3309	5prime_fragment	FALSE	canonical	3	587	junction_6	30.5632029571509	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACAGTTGGATTTCTCA	NA	False	NA	NA	False	AATAAA	-26	NA	29080742	29088872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417
ES.4494.70	chr11	+	4461	26	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_17	128.416858706324	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTGCTTGCCTACT	NA	False	NA	NA	False	NA	NA	NA	29080751	29111825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.71	chr11	+	2659	29	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	216.80079966341	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080751	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29081253_29081364_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091323_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.72	chr11	+	4656	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	5	641	intron_retention	FALSE	canonical	0	0	junction_9	192.84153978709	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTTTAAGGTATGTT	NA	False	NA	NA	False	TTTAAA	-19	NA	29080752	29112469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088649_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.74	chr11	+	2594	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	195.603269536208	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACTGTGCTTGCCTACT	NA	False	NA	NA	False	NA	NA	NA	29080752	29111825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29096795_29096833_29097331_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.76	chr11	+	3322	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	5	605	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	166.872523075179	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGGATTTATTTAAATA	NA	False	NA	NA	False	TATAAA	-20	NA	29080752	29112433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083836_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.78	chr11	+	4408	27	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	6	355	intron_retention	FALSE	canonical	0	0	junction_18	167.286930630469	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGTCAAATCCATCGC	NA	False	NA	NA	False	TATAAA	-31	NA	29080753	29112183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088661_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.79	chr11	+	5187	24	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	10	-3	intron_retention	FALSE	canonical	3	23	junction_2	129.534530944433	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29080757	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29080919_29082844_29082906_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.8	chr11	+	3360	27	FSM	ENSMUSG00000020464.16	ENSMUST00000154924.8	3368	27	0	8	0	-8	multi-exon	FALSE	canonical	3	488	junction_10	52.7864403424181	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29080743	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.80	chr11	+	4875	22	NNC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	-3588	0	intron_retention	FALSE	canonical	3	5	junction_6	136.219177794806	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29084598	29111680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088661_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.81	chr11	+	2833	23	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	-1069	638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	170.75535275905	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGATTTTTAAGGTAT	NA	False	NA	NA	False	TTTAAA	-16	NA	29087117	29112466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.82	chr11	+	1566	17	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	10475	156	3036	-8	3prime_fragment	FALSE	canonical	0	0	junction_8	153.242952019824	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29091222	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.83	chr11	+	3712	12	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	7211	0	intron_retention	FALSE	canonical	3	581	junction_9	32.0229772878814	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29095397	29111680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29095500_29096795_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.84	chr11	+	2341	9	ISM	ENSMUSG00000020464.16	ENSMUST00000154924.8	3368	27	21998	8	14555	-8	3prime_fragment	FALSE	canonical	3	581	junction_6	25.6463325838218	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGCTATTTTTATA	NA	False	NA	0	True	AATAAA	-12	NA	29102741	29111672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.85	chr11	+	2589	5	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	16701	-3	intron_retention	FALSE	canonical	3	581	junction_2	16.2230545829076	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTATTTTTATATCTTA	NA	False	NA	5	True	AATAAA	-17	NA	29104887	29111677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.86	chr11	+	1434	5	ISM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	26087	-641	18648	641	3prime_fragment	FALSE	canonical	3	581	junction_2	16.2230545829076	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTTTAAGGTATGTT	NA	False	NA	NA	False	TTTAAA	-19	NA	29106834	29112469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4494.9	chr11	+	2864	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	180	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	159.252962838496	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGCTAGAGTAACTT	NA	False	NA	NA	False	TATAAA	-4	NA	29080743	29112008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ES.4495.1	chr11	+	5963	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	-837	-1	-837	1	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGTGTTTTAATCACTAG	NA	False	NA	24	True	AATAAA	-36	NA	29122052	29170798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.10	chr11	+	5166	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-51	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	108.558965032322	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCACGTGTTTTAATCA	NA	False	NA	20	True	AATAAA	-32	NA	29122838	29170794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124728_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146285_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.11	chr11	+	5127	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-25	-2	intron_retention	FALSE	canonical	3	28	junction_13	76.4560585492666	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29122864	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
ES.4495.12	chr11	+	4330	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-17	-791	intron_retention	FALSE	canonical	3	28	junction_13	76.4560585492666	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	14	True	ATTAAA	-23	NA	29122872	29170006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
ES.4495.14	chr11	+	3712	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-12	-801	intron_retention	FALSE	canonical	0	0	junction_3	87.0192624699631	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATGATTGAGGCTTC	NA	False	NA	4	True	ATTAAA	-13	NA	29122877	29169996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.16	chr11	+	4660	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	5	junction_3	104.725164120187	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122887	29170797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29138129_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.17	chr11	+	4350	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	2	-797	intron_retention	FALSE	canonical	2	4	junction_9	83.4291715568761	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGATTGAGGCTTCTGTT	NA	False	NA	8	True	ATTAAA	-17	NA	29122891	29170000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152842_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.18	chr11	+	4041	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	4	-792	intron_retention	FALSE	canonical	3	27	junction_4	78.3308084699472	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGCTTCTGTTTGTTT	NA	False	NA	13	True	ATTAAA	-22	NA	29122893	29170005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.19	chr11	+	4318	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	6	-795	intron_retention	FALSE	canonical	2	3	junction_6	83.0662386291807	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGAGGCTTCTGTTTG	NA	False	NA	10	True	ATTAAA	-19	NA	29122895	29170002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146285_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.2	chr11	+	2851	2	ISM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	-826	33502	-826	-12211	5prime_fragment	FALSE	canonical	3	338	junction_1	0	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTGAGTGTTTCTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	29122063	29126139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29123448_29124672
ES.4495.20	chr11	+	2390	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	19	1	19	-1	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTTTTATTCTTACT	NA	False	NA	NA	False	AATAAA	-18	NA	29122908	29159640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ES.4495.21	chr11	+	5123	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	25	-1	intron_retention	FALSE	canonical	2	4	junction_9	83.4291715568761	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122914	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152842_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.22	chr11	+	4788	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	27	-1	intron_retention	FALSE	canonical	3	27	junction_4	98.8044983231477	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122916	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
ES.4495.23	chr11	+	4972	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	29	-7	intron_retention	FALSE	canonical	0	0	junction_5	86.0261291582923	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCACGTGTTTTA	NA	False	NA	16	True	AATAAA	-28	NA	29122918	29170790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.24	chr11	+	3834	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	29	-795	intron_retention	FALSE	canonical	3	5	junction_3	104.725164120187	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGAGGCTTCTGTTTG	NA	False	NA	10	True	ATTAAA	-19	NA	29122918	29170002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29138129_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.25	chr11	+	4448	15	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	29	-3	intron_retention	FALSE	canonical	0	0	junction_3	106.837779949275	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCACGTGTTTTAATCA	NA	False	NA	20	True	AATAAA	-32	NA	29122918	29170794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
ES.4495.26	chr11	+	5998	15	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	30	-791	intron_retention	FALSE	canonical	2	24	junction_13	80.941778017112	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	14	True	ATTAAA	-23	NA	29122919	29170006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163675_29163797_29168455
ES.4495.27	chr11	+	8830	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	30	-804	intron_retention	FALSE	non_canonical	0	0	junction_15	83.7711167407956	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCCATGATTGAGGC	NA	False	NA	1	True	ATTAAA	-10	NA	29122919	29169993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29166975_29167094
ES.4495.28	chr11	+	4097	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	30	-792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	81.7159476096924	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGCTTCTGTTTGTTT	NA	False	NA	13	True	ATTAAA	-22	NA	29122919	29170005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123015_29123220_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.29	chr11	+	9735	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	30	-2	intron_retention	FALSE	non_canonical	0	0	junction_16	122.976099685061	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29122919	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29166975_29167094
ES.4495.3	chr11	+	5612	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-775	0	intron_retention	FALSE	canonical	3	27	junction_4	78.3308084699472	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122114	29170797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.31	chr11	+	3443	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	32	1650	32	591	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTCCAAATGGATAG	NA	False	NA	NA	False	AATACA	-22	NA	29122921	29169147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.32	chr11	+	9595	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	62	-9	intron_retention	FALSE	non_canonical	0	0	junction_15	83.7711167407956	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGATTCACGTGTTT	NA	False	NA	14	True	AATAAA	-26	NA	29122951	29170788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29166989_29167106
ES.4495.33	chr11	+	4978	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	64	-1	intron_retention	FALSE	canonical	2	24	junction_14	78.2544567420923	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122953	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163675_29163797_29168455
ES.4495.34	chr11	+	4106	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	65	-795	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	81.9744858265705	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGAGGCTTCTGTTTG	NA	False	NA	10	True	ATTAAA	-19	NA	29122954	29170002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.37	chr11	+	3151	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	74	362	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_13	76.4560585492666	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCACGTTGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	29122963	29168918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
ES.4495.38	chr11	+	3186	17	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	74	-7	combination_of_known_junctions	FALSE	canonical	2	13	junction_16	78.9204504548726	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCACGTGTTTTA	NA	False	NA	16	True	AATAAA	-28	NA	29122963	29170790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455_29168686_29170543
ES.4495.39	chr11	+	4424	15	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	74	-1	intron_retention	FALSE	canonical	0	0	junction_3	108.832510336399	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122963	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155703_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.4	chr11	+	2724	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	-123	-191	-123	191	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTCTTTCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	29122766	29159832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ES.4495.41	chr11	+	1544	10	NIC	ENSMUSG00000020463.16	novel	2410	12	NA	NA	75	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	129.447353329261	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCACTTATTTTTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	29122964	29159633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29159316
ES.4495.43	chr11	+	3255	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	84.0014285592811	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTACATTGTTGGGACC	NA	False	NA	NA	False	TTTAAA	-43	NA	29122964	29168998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147214_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.44	chr11	+	4270	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	-801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	84.2802204289687	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATGATTGAGGCTTC	NA	False	NA	4	True	ATTAAA	-13	NA	29122964	29169996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.45	chr11	+	4362	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	-791	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_13	104.607432067468	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	14	True	ATTAAA	-23	NA	29122964	29170006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.46	chr11	+	4148	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	81.7159476096924	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCACGTGTTTTAATCA	NA	False	NA	20	True	AATAAA	-32	NA	29122964	29170794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455_29168596_29169494
ES.4495.47	chr11	+	6675	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	-4	intron_retention	FALSE	canonical	3	241	junction_13	38.1179694086232	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTCACGTGTTTTAATC	NA	False	NA	19	True	AATAAA	-31	NA	29122964	29170793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.49	chr11	+	3206	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	78	-4362	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_13	107.868561994061	428	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATTTCTTAACATACTA	NA	False	NA	NA	False	AATAAA	-14	NA	29122967	29164194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593
ES.4495.50	chr11	+	8896	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	78	-801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	122.976099685061	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATGATTGAGGCTTC	NA	False	NA	4	True	ATTAAA	-13	NA	29122967	29169996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29166975_29167086
ES.4495.51	chr11	+	4987	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	81	-15	intron_retention	FALSE	canonical	1	7	junction_9	84.9867036419131	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGAAACAGATTCAC	NA	False	NA	8	True	AATAAA	-20	NA	29122970	29170782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.52	chr11	+	4209	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	86	-791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.7670314357358	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	14	True	ATTAAA	-23	NA	29122975	29170006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155584_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.53	chr11	+	4065	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	86	-795	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	83.0410875544283	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGAGGCTTCTGTTTG	NA	False	NA	10	True	ATTAAA	-19	NA	29122975	29170002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29138129_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.54	chr11	+	4227	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	86	-794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.8613670821606	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGGCTTCTGTTTGT	NA	False	NA	11	True	ATTAAA	-20	NA	29122975	29170003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144669_29146209_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.55	chr11	+	5056	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	87	-3	intron_retention	FALSE	canonical	1	5	junction_13	119.99420558927	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCACGTGTTTTAATCA	NA	False	NA	20	True	AATAAA	-32	NA	29122976	29170794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163675_29163797_29168455
ES.4495.56	chr11	+	4033	15	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	-801	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	85.8527453116732	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATGATTGAGGCTTC	NA	False	NA	4	True	ATTAAA	-13	NA	29122977	29169996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29168455
ES.4495.57	chr11	+	4174	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	-792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	82.6762360052754	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGCTTCTGTTTGTTT	NA	False	NA	13	True	ATTAAA	-22	NA	29122977	29170005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161185_29161606_29161792_29163593_29163797_29168455
ES.4495.58	chr11	+	2033	12	NNC	ENSMUSG00000020463.16	novel	2410	12	NA	NA	88	-1	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	87.5560741222588	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATTTTTTATTCTTACT	NA	False	NA	NA	False	AATAAA	-18	NA	29122977	29159640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ES.4495.60	chr11	+	6198	15	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	-1	intron_retention	FALSE	canonical	3	5	junction_3	108.400335115078	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122977	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29138129_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.61	chr11	+	4732	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	-2	intron_retention	FALSE	canonical	0	0	junction_15	105.41971141848	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29122977	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163782_29168455
ES.4495.63	chr11	+	4850	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	-2	intron_retention	FALSE	canonical	1	5	junction_13	119.075983488485	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29122977	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.64	chr11	+	6092	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	89	-1056	89	1056	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTTCTGTTTTGCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	29122978	29171853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.65	chr11	+	4859	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	90	-23	intron_retention	FALSE	non_canonical	0	0	junction_3	109.764880034048	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGTTATGTGAAAC	NA	False	NA	0	True	AATAAA	-12	NA	29122979	29170774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132551_29138129_29138575_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.66	chr11	+	4153	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	90	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	106.286464331071	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTCACGTGTTTTAATC	NA	False	NA	19	True	AATAAA	-31	NA	29122979	29170793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455_29168596_29169494
ES.4495.67	chr11	+	5052	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	94	0	intron_retention	FALSE	canonical	0	0	junction_4	84.2802204289687	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122983	29170797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.68	chr11	+	4857	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	94	0	intron_retention	FALSE	non_canonical	0	0	junction_3	84.1641253741759	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122983	29170797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132551_29138129_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.69	chr11	+	5009	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	94	0	intron_retention	FALSE	canonical	0	0	junction_3	84.1641253741759	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122983	29170797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137972_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.7	chr11	+	5207	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-95	-1	intron_retention	FALSE	canonical	0	0	junction_12	84.2676687704128	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGTGTTTTAATCACT	NA	False	NA	22	True	AATAAA	-34	NA	29122794	29170796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161127_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.71	chr11	+	5152	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	95	-2	intron_retention	FALSE	canonical	0	0	junction_4	122.36574275507	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29122984	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.72	chr11	+	5019	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	96	-4	intron_retention	FALSE	non_canonical	0	0	junction_10	83.7670314357358	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTCACGTGTTTTAATC	NA	False	NA	19	True	AATAAA	-31	NA	29122985	29170793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155551_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.74	chr11	+	3638	15	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	96	-794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	87.0192624699631	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGAGGCTTCTGTTTGT	NA	False	NA	11	True	ATTAAA	-20	NA	29122985	29170003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132552_29144551_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.76	chr11	+	5120	17	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	99	-9	intron_retention	FALSE	canonical	1	5	junction_13	104.607432067468	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGATTCACGTGTTT	NA	False	NA	14	True	AATAAA	-26	NA	29122988	29170788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29160901_29161005_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.77	chr11	+	4213	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	104	-792	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	83.8613670821606	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGGCTTCTGTTTGTTT	NA	False	NA	13	True	ATTAAA	-22	NA	29122993	29170005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146189_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.78	chr11	+	4961	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	166	-2	intron_retention	FALSE	canonical	0	0	junction_7	84.0014285592811	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACGTGTTTTAATCAC	NA	False	NA	21	True	AATAAA	-33	NA	29123055	29170795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147214_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.8	chr11	+	3271	15	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	-88	6601	-88	-4360	5prime_fragment	FALSE	canonical	3	241	junction_14	36.0923560226443	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTCTTAACATACTACT	NA	False	NA	NA	False	AATAAA	-16	NA	29122801	29164196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593
ES.4495.81	chr11	+	3944	12	NIC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	-8900	-15	intron_retention	FALSE	canonical	0	0	junction_3	95.2616232252219	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGTGAAACAGATTCAC	6621	False	NA	8	True	AATAAA	-20	NA	29138286	29170782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29138575_29144572_29144651_29146173_29146291_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4495.82	chr11	+	7412	3	ISM	ENSMUSG00000020463.16	ENSMUST00000127818.2	827	6	5604	-2237	-2395	-4	intron_retention	FALSE	canonical	3	241	junction_2	52.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTCACGTGTTTTAATC	NA	False	NA	19	True	AATAAA	-31	NA	29161228	29170793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29161256_29161606_29161792_29163593
ES.4495.83	chr11	+	6319	2	Genic_Genomic	ENSMUSG00000020463.16	novel	5125	16	NA	NA	1791	1056	multi-exon	FALSE	non_canonical	0	0	junction_1	0	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTTCTGTTTTGCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	29165414	29171853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_29166975_29167094
ES.4495.84	chr11	+	632	1	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	46034	1242	5300	999	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGTTAAGAGCTTTTAT	NA	False	NA	NA	False	AAAAAG	-41	NA	29168923	29169555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29168900_29169600
ES.4495.9	chr11	+	4415	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	-81	791	-81	-791	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGCTTCTGTTTGTTTT	NA	False	NA	14	True	ATTAAA	-23	NA	29122808	29170006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ES.4496.1	chr11	+	5311	1	Antisense	novelGene_ENSMUSG00000020462.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	2474	False	NA	NA	False	NA	NA	NA	29181913	29187224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_29181900_29187200
ES.4497.1	chr11	-	4632	1	Genic_Genomic	ENSMUSG00000086725.2	novel	NA	NA	NA	NA	879	2861	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTACTGTATATTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	29122679	29118047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_29118000_29122700
ES.4497.2	chr11	-	2146	1	Genic_Genomic	ENSMUSG00000086725.2	novel	NA	NA	NA	NA	935	431	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCCTTAAGCCATATGA	NA	False	NA	NA	False	AAAACA	-13	NA	29122623	29120477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_29120500_29122600
ES.4497.3	chr11	-	1919	1	Genic_Genomic	ENSMUSG00000086725.2	novel	NA	NA	NA	NA	823	92	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTTTATTGCGT	NA	False	NA	NA	False	AATACA	-17	NA	29122735	29120816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_29120800_29122700
ES.4498.1	chr11	-	2293	5	Antisense	novelGene_ENSMUSG00000020463.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACGATGGGGCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	29153421	29144183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29144649_29146171_29147210_29148792_29148925_29150700_29150800_29152862
ES.4498.2	chr11	-	1461	6	Antisense	novelGene_ENSMUSG00000020463.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-34	NA	29153421	29144213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29144649_29146171_29146290_29147091_29147210_29148792_29148925_29150700_29150800_29152862
ES.4498.3	chr11	-	176	1	Intergenic	novelGene_3470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATACTAATTTT	NA	False	NA	NA	False	NA	NA	NA	29145456	29145280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29145300_29145500
ES.4498.4	chr11	-	2521	1	Antisense	novelGene_ENSMUSG00000020463.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAACAGACATTAAACAT	NA	False	NA	NA	False	NA	NA	NA	29150143	29147622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29147600_29150100
ES.4499.1	chr11	-	4576	9	NIC	ENSMUSG00000020462.15	novel	1664	10	NA	NA	-60	0	intron_retention	FALSE	canonical	3	210	junction_3	20.508763370813	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTTTTCTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	29197348	29171531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29171986_29172433_29172584_29172743_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ES.4499.2	chr11	-	1557	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	92	15	-29	-15	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACAAAATTTTG	NA	False	NA	NA	False	AATAAA	-4	NA	29197317	29171546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ES.4499.3	chr11	-	3608	9	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	-95	15	-95	-15	intron_retention	FALSE	canonical	3	210	junction_4	20.3285513502561	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACAAAATTTTG	NA	False	NA	NA	False	AATAAA	-4	NA	29197504	29171546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085
ES.4499.5	chr11	-	1300	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	75	289	-46	-289	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTTAGTTTCAAGC	NA	False	NA	NA	False	AATAAA	-18	NA	29197334	29171820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ES.4499.6	chr11	-	4257	9	NIC	ENSMUSG00000020462.15	novel	1664	10	NA	NA	-34	-293	intron_retention	FALSE	canonical	3	210	junction_3	20.508763370813	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGACTGTTAGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	29197322	29171824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29171986_29172433_29172584_29172743_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ES.4499.7	chr11	-	3805	3	FSM	ENSMUSG00000020462.15	ENSMUST00000144627.2	456	3	-223	-3126	-3	3126	multi-exon	FALSE	canonical	3	210	junction_1	19	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATATTTTTTCCTCCTG	NA	False	NA	NA	False	AATAAA	-12	NA	29197291	29190697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29194161_29195085_29195151_29197014
ES.4499.8	chr11	-	703	3	FSM	ENSMUSG00000020462.15	ENSMUST00000144627.2	456	3	-243	-4	-23	4	multi-exon	FALSE	canonical	3	210	junction_1	19	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGTGTGGTTTCATTT	NA	False	NA	NA	False	ATTAAA	-42	NA	29197311	29193819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29194161_29195085_29195151_29197014
ES.45.1	chr1	-	176	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	7188117	7187941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_7187900_7188100
ES.450.1	chr1	-	5599	1	Antisense	novelGene_ENSMUSG00000043015.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	52682267	52676668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_52676700_52682300
ES.4500.1	chr11	+	7820	30	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-175	985	combination_of_known_splicesites	TRUE	canonical	3	11	junction_28	16.8757789268417	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTATGCCTTTAACCC	NA	False	NA	NA	False	NA	NA	NA	29323482	29455790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29453382_29453652_29453851
ES.4500.10	chr11	+	6945	31	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-58	-1366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	15.1208465371486	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAATTCACTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	29323599	29459442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29455017_29459423
ES.4500.11	chr11	+	9350	31	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-52	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	20.9343948775428	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29323605	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415608_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449331_29449407_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.12	chr11	+	9102	31	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-49	-242	combination_of_known_splicesites	FALSE	canonical	3	11	junction_27	14.7726850038245	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATATAAAAAGCTGTA	NA	False	NA	NA	False	ATTAAA	-10	NA	29323608	29460566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.13	chr11	+	8610	31	FSM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-738	-1821	-48	1821	multi-exon	FALSE	canonical	3	23	junction_26	14.1107130302555	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAGCACAAAGACAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	29323609	29456626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.14	chr11	+	7246	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-40	753	combination_of_known_splicesites	FALSE	canonical	1	2	junction_25	15.1308914988847	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGAATTTGTATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	29323617	29455558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.15	chr11	+	10125	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-35	-714	-35	714	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGCTGCAAAAATTGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	29323622	29461522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.16	chr11	+	9573	33	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-30	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.0525588832576	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAGTCATTTTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	29323627	29460812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29377397_29377561_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.18	chr11	+	9401	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-21	-4	-21	4	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAGTCATTTTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	29323636	29460812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.19	chr11	+	7346	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-20	753	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	15.6434686768919	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGAATTTGTATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	29323637	29455558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.2	chr11	+	7588	31	FSM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-779	-758	-89	758	multi-exon	FALSE	canonical	3	23	junction_26	14.1107130302555	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTGTATTTTTACTTC	NA	False	NA	NA	False	AATAAA	-21	NA	29323568	29455563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.21	chr11	+	3702	17	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-704	34348	-14	9229	5prime_fragment	FALSE	canonical	3	45	junction_8	7.67885692990825	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTTTCTTTGTAATA	NA	False	NA	NA	False	AAAACA	-2	NA	29323643	29420457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314
ES.4500.22	chr11	+	7072	28	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-12	753	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	15.7020439374447	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGAATTTGTATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	29323645	29455558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453851
ES.4500.23	chr11	+	7499	31	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	3	755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6959591593716	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAATTTGTATTTTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	29323660	29455560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29372699_29372790_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.24	chr11	+	7995	32	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	3	-1543	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	15.827241101155	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGTGCTATTTAAATG	NA	False	NA	NA	False	TATAAA	-26	NA	29323660	29459265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454477_29457124_29457224_29457694
ES.4500.25	chr11	+	2276	14	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-680	43017	10	560	5prime_fragment	FALSE	canonical	3	45	junction_8	7.52038649390784	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGCTCAGCTTGA	NA	False	NA	NA	False	AAGAAA	-45	NA	29323667	29411788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710
ES.4500.26	chr11	+	7734	32	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	17	-1628	combination_of_known_splicesites	FALSE	canonical	3	11	junction_28	17.2162592849582	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGTTAGAGAACTTGG	NA	False	NA	NA	False	AATAAA	-31	NA	29323674	29459180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.27	chr11	+	7812	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	18	1546	18	-1546	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGGTGCTATTTAA	NA	False	NA	NA	False	TATAAA	-23	NA	29323675	29459262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.28	chr11	+	9442	33	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	19	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	17.9059773103146	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAGTCATTTTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	29323676	29460812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453385_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.29	chr11	+	7318	29	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	19	752	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	17.8792363325936	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGAATTTGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	29323676	29455557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401012_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851
ES.4500.3	chr11	+	8717	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-83	4026	-83	1977	5prime_fragment	FALSE	canonical	3	45	junction_8	9.8353871035569	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTTACAGAAGTATTCT	NA	False	NA	NA	False	TATAAA	-27	NA	29323574	29456782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.30	chr11	+	9129	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	19	228	19	-228	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAACATTTCCTTTAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	29323676	29460580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.31	chr11	+	3416	15	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-670	40596	20	2981	5prime_fragment	FALSE	canonical	3	45	junction_8	7.3404804380384	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGGCAATCATTTTTTA	NA	False	NA	NA	False	ATTAAA	-41	NA	29323677	29414209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119
ES.4500.32	chr11	+	7217	32	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	21	-2136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	16.0361194804627	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTAATCTTGAAATATT	NA	False	NA	NA	False	ATTAAA	-14	NA	29323678	29458672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401102_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.33	chr11	+	9318	31	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	22	507	22	-507	intron_retention	FALSE	canonical	3	45	junction_8	9.98048095033501	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTATTTGTCCTGAGAT	NA	False	NA	NA	False	AAAAAG	-17	NA	29323679	29460301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124
ES.4500.34	chr11	+	9195	30	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	19.3829914285229	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29323684	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406456_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.35	chr11	+	7327	29	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	27	756	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	18.1155587655406	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATTTGTATTTTTACT	NA	False	NA	NA	False	AATAAA	-19	NA	29323684	29455561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411688_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851
ES.4500.36	chr11	+	7230	31	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	28	520	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	17.6501809874258	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTTTATTCATAAATGT	NA	False	NA	NA	False	TATAAA	-20	NA	29323685	29455325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453385_29453652_29453851
ES.4500.37	chr11	+	7555	28	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	29	-312	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.6686506882131	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGTATCCAGTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	29323686	29453206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975
ES.4500.38	chr11	+	10769	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	31	1817	intron_retention	FALSE	canonical	3	45	junction_8	9.77319324082201	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGATGCAGCACAAAGACA	NA	False	NA	NA	False	AATAAA	-13	NA	29323688	29456622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29453652_29453851
ES.4500.39	chr11	+	6484	32	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	34	-2855	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	15.7084519625364	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGAGTGTTTAAGGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	29323691	29457953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453385_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.4	chr11	+	7485	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-68	5243	-68	760	5prime_fragment	FALSE	canonical	3	45	junction_8	9.8353871035569	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTATTTTTACTTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	29323589	29455565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.41	chr11	+	7294	33	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	38	-2128	combination_of_known_junctions	FALSE	canonical	3	23	junction_26	14.8739495427408	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAATATTTGTATGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	29323695	29458680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.42	chr11	+	7599	30	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	39	-2128	intron_retention	FALSE	canonical	3	11	junction_27	13.8348506156615	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAATATTTGTATGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	29323696	29458680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851_29454312_29457124
ES.4500.43	chr11	+	9193	33	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	39	-228	combination_of_known_junctions	FALSE	canonical	3	23	junction_26	14.8739495427408	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAACATTTCCTTTAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	29323696	29460580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.44	chr11	+	6566	33	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	43	-2857	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.9422436303095	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACCGAGTGTTTAAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	29323700	29457951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29372699_29372790_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.45	chr11	+	12224	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	46	390	46	-390	intron_retention	FALSE	canonical	3	45	junction_8	9.8353871035569	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCCTTAAATGGAATG	NA	False	NA	NA	False	TATAAA	-34	NA	29323703	29460418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.46	chr11	+	7187	32	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-57	-2130	combination_of_known_splicesites	FALSE	canonical	3	11	junction_28	17.2162592849582	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAAATATTTGTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	29323719	29458678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.47	chr11	+	5509	26	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-604	6945	-33	0	5prime_fragment	FALSE	canonical	3	24	junction_25	12.709429570205	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCATTCTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	29323743	29447860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342
ES.4500.48	chr11	+	8311	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-32	1822	combination_of_known_splicesites	FALSE	canonical	3	11	junction_27	13.9168448805242	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGCACAAAGACAGAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	29323744	29456627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851
ES.4500.49	chr11	+	7614	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	98	1664	-21	-1664	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACGACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	29323755	29459144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.5	chr11	+	6428	29	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	-758	2907	-68	-1620	5prime_fragment	FALSE	canonical	3	23	junction_26	14.3410979996908	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTTGTTTTATAA	NA	False	NA	NA	False	AATACA	-20	NA	29323589	29451898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975
ES.4500.50	chr11	+	12762	30	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-183	-2	intron_retention	FALSE	canonical	3	30	junction_29	11.6815657087502	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29324164	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.51	chr11	+	5757	24	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	158	9280	158	-2335	internal_fragment	FALSE	canonical	3	45	junction_7	10.3923048454133	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCTTGATCTAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	29324505	29445525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878
ES.4500.53	chr11	+	4603	1	Intergenic	novelGene_3471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGATATCATAAATAGTGT	NA	False	NA	NA	False	AATACA	-43	NA	29331850	29336453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29331800_29336500
ES.4500.54	chr11	+	6137	24	NNC	ENSMUSG00000032740.18	novel	2209	13	NA	NA	-17569	752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7966825421998	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGAATTTGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	29388926	29455557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29388972_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.55	chr11	+	8102	26	NNC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-8568	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	22.9856999023306	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29397927	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430655_29432108_29432387_29432607_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.56	chr11	+	7257	21	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	82799	242	-39	-242	3prime_fragment	FALSE	canonical	3	30	junction_20	12.9355131324583	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATATAAAAAGCTGTA	NA	False	NA	NA	False	ATTAAA	-10	NA	29406456	29460566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.57	chr11	+	4372	17	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	82800	8936	-38	-1646	internal_fragment	FALSE	canonical	3	55	junction_10	10.5356537528527	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATGATTTTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	29406457	29451872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975
ES.4500.58	chr11	+	5240	14	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	82123	8658	-25	-1713	internal_fragment	FALSE	canonical	3	55	junction_10	11.0966704319159	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGAGTGCTTCATTTT	NA	False	NA	NA	False	AAAACA	-5	NA	29406470	29446147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878
ES.4500.59	chr11	+	6423	15	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	-219	-244	intron_retention	FALSE	canonical	1	2	junction_11	23.882792029033	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAATATAAAAAGCTG	NA	False	NA	NA	False	ATTAAA	-8	NA	29413668	29460564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29449334_29449407_29453382_29453652_29453851_29454312_29457124
ES.4500.6	chr11	+	8538	30	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-67	1817	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	15.0288663979718	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGATGCAGCACAAAGACA	NA	False	NA	NA	False	AATAAA	-13	NA	29323590	29456622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453385_29453652_29453851
ES.4500.61	chr11	+	5687	16	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	1789	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	21.2414688757628	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29415676	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.62	chr11	+	174	1	Intergenic	novelGene_3473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATGTAAT	NA	False	NA	NA	False	NA	NA	NA	29429861	29430035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29429900_29430000
ES.4500.63	chr11	+	6530	12	ISM	ENSMUSG00000032740.18	ENSMUST00000123561.8	2209	13	10277	-4565	-5348	-2137	3prime_fragment	FALSE	canonical	3	55	junction_3	11.386522408619	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGGTAATCTTGAAATAT	NA	False	NA	NA	False	ATTAAA	-13	NA	29430630	29458671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ES.4500.65	chr11	+	5679	10	NIC	ENSMUSG00000032740.18	novel	2209	13	NA	NA	-3828	752	intron_retention	FALSE	canonical	3	55	junction_2	12.3378370155478	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGAATTTGTATTTT	NA	False	NA	NA	False	AATAAA	-15	NA	29432150	29455557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29453652_29453851
ES.4500.66	chr11	+	171	1	Intergenic	novelGene_3474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGAGTTTTATTGCT	NA	False	NA	NA	False	NA	NA	NA	29438383	29438554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29438400_29438600
ES.4500.67	chr11	+	6102	10	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	115943	-1368	3622	1368	3prime_fragment	FALSE	canonical	3	30	junction_9	14.3372087784044	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGATTTAATACTTCAGC	NA	False	NA	NA	False	AATAAA	-18	NA	29439600	29462176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.68	chr11	+	2295	6	NNC	ENSMUSG00000032740.18	novel	2209	13	NA	NA	-39	515	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	26.55861442169	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACTGTTTATTCATA	NA	False	NA	NA	False	TATAAA	-15	NA	29443890	29455320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453385_29453652_29453851
ES.4500.69	chr11	+	7231	6	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	2273	4	intron_retention	FALSE	canonical	3	30	junction_5	15.7657857400131	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAGTCATTTTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	29446202	29460812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ES.4500.7	chr11	+	12647	29	NIC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-64	4	intron_retention	FALSE	canonical	3	11	junction_27	13.9168448805242	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAGTCATTTTAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	29323593	29460812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29453382_29453652_29453851
ES.4500.8	chr11	+	2450	6	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	-63	5281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	23.7200337267888	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTTGGTTACATGTT	NA	False	NA	NA	False	AATAAA	-27	NA	29323594	29378692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29377397
ES.4500.9	chr11	+	9907	31	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	-62	2	-62	-2	intron_retention	FALSE	canonical	3	45	junction_8	9.98048095033501	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	29323595	29460806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124
ES.4501.1	chr11	-	177	1	Intergenic	novelGene_3472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAATACCCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	29376545	29376368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29376400_29376500
ES.4502.1	chr11	-	1272	4	NNC	ENSMUSG00000032673.6	novel	2126	3	NA	NA	25	18660	intron_retention	FALSE	canonical	0	0	junction_2	179.373601426991	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTGCTGTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	29465006	29443096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29444072_29457521_29457674_29463621_29463677_29464916
ES.4502.2	chr11	-	921	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	-4	1	-4	-1	multi-exon	FALSE	canonical	3	382	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGTCTTTAATTT	NA	False	NA	-2	True	AATAAA	-22	NA	29465037	29462876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29463677_29464916
ES.4502.3	chr11	-	1382	2	ISM	ENSMUSG00000032673.6	ENSMUST00000133103.2	2126	3	15	1123	15	-4	intron_retention	FALSE	canonical	3	45	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTCTTGTGTCTTTAA	NA	False	NA	-5	True	AATAAA	-19	NA	29465016	29462879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_29463677_29464431
ES.4502.4	chr11	-	984	3	FSM	ENSMUSG00000032673.6	ENSMUST00000133103.2	2126	3	15	1127	15	-8	multi-exon	FALSE	canonical	3	43	junction_2	1	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTATTTCTTGTGTCT	NA	False	NA	-9	True	AATAAA	-15	NA	29465016	29462883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29463677_29464431_29464523_29464916
ES.4502.5	chr11	-	722	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	10	186	8	-186	multi-exon	FALSE	canonical	3	382	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29465023	29463061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29463677_29464916
ES.4503.1	chr11	+	2338	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-82	169	-42	-138	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGGGTGTGGTGGTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	29476365	29495110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.10	chr11	+	2716	14	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	7	180	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	63.202408013447	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCCTTCATTTAAAT	NA	False	NA	13	True	NA	NA	NA	29476414	29495459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476566_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.11	chr11	+	2490	13	NIC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	7	173	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	76.3614849835235	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476414	29495452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494912
ES.4503.13	chr11	+	4972	24	Fusion	ENSMUSG00000020461.11_ENSMUSG00000020459.15	novel	2741	14	NA	NA	-3	42	intron_retention	FALSE	non_canonical	0	0	junction_13	109.037670603265	250	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGGCTACTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	29476443	29528409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_29476844_29479928_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490594_29490822_29491340_29491482_29492344_29492510_29494269_29494411_29494912_29495102_29503503_29503763_29506068_29506257_29507652_29507787_29510449_29510652_29510733_29510847_29511371_29511457_29519200_29519376_29521649_29521853_29523323_29523413_29525379_29525525_29528037
ES.4503.14	chr11	+	4514	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	166	intron_retention	FALSE	canonical	3	166	junction_5	29.7782312361825	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476446	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.15	chr11	+	4267	12	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	176	intron_retention	FALSE	canonical	1	4	junction_3	102.56294177135	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATTTTCCCTTCATTT	NA	False	NA	9	True	NA	NA	NA	29476446	29495455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29477802_29479928_29480779_29483225_29483398_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.17	chr11	+	2744	13	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	166	intron_retention	FALSE	canonical	1	4	junction_4	85.8006005547488	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476449	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490822_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.18	chr11	+	2235	11	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	1	-370	intron_retention	FALSE	canonical	2	6	junction_10	66.8807894690247	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGTTCTTTGATTTT	NA	False	NA	NA	False	NA	NA	NA	29476450	29491651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490822_29491340
ES.4503.19	chr11	+	1231	5	NNC	ENSMUSG00000020459.15	novel	1605	9	NA	NA	-1	162	intron_retention	FALSE	canonical	3	13	junction_3	86.5574231363203	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGACTGCTTAAAGCCA	NA	False	NA	NA	False	AATAAA	-13	NA	29476455	29484078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29480155_29480580_29480779_29483225_29483398_29483831
ES.4503.2	chr11	+	3035	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-83	-211	-34	180	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCCTTCATTTAAAT	NA	False	NA	13	True	NA	NA	NA	29476373	29495459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.23	chr11	+	690	1	NIC	ENSMUSG00000020459.15	novel	741	5	NA	NA	1	-3081	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTAAGGAATCCTATGCT	NA	False	NA	NA	False	NA	NA	NA	29476457	29477147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476500_29477100
ES.4503.24	chr11	+	2535	15	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	61.3790913678498	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	29476457	29495248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29476692_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.25	chr11	+	2832	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	1	173	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476457	29495452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.26	chr11	+	3014	13	NIC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	1	173	intron_retention	FALSE	canonical	3	41	junction_1	58.1819464171567	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476457	29495452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29479928_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.27	chr11	+	1860	10	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	77.1146332849134	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	29476458	29495248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476764_29485217_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.28	chr11	+	2752	15	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	2	173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.654400107622	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476458	29495452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476488_29476678_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.29	chr11	+	2414	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	11	0	2	0	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	29476458	29495279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.30	chr11	+	2277	14	NNC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	3	-191	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	76.471366029941	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTCCTGGGATCCAG	NA	False	NA	NA	False	AATAAA	-9	NA	29476459	29495057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476488_29479928_29480155_29480580_29480779_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.31	chr11	+	2656	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	29476460	29495279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.32	chr11	+	2740	14	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	6	166	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	81.5150184006117	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476462	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476566_29479928_29480155_29480580_29480779_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.33	chr11	+	2594	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	9	138	9	-138	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGGGTGTGGTGGTGCA	NA	False	NA	NA	False	ATTAAA	-14	NA	29476465	29495110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.34	chr11	+	2354	4	NNC	ENSMUSG00000020459.15	novel	1605	9	NA	NA	10	166	intron_retention	FALSE	non_canonical	0	0	junction_2	83.4386001800126	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476466	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29481655_29492159_29492221_29495255
ES.4503.35	chr11	+	2478	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	11	-140	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCCGGGTGTGGTGGTG	NA	False	NA	NA	False	ATTAAA	-12	NA	29476467	29495108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.36	chr11	+	2766	14	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	13	166	intron_retention	FALSE	canonical	0	0	junction_2	66.0246502290608	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476469	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29479996_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.37	chr11	+	1741	11	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	13	590	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	65.7844966538469	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTGAAAGTTTTAC	NA	False	NA	NA	False	ATTAAA	-3	NA	29476469	29490862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29476692_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608
ES.4503.38	chr11	+	2483	14	NNC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	81.9361853001375	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	29476469	29495279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476566_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494267_29494411_29494912
ES.4503.39	chr11	+	1698	3	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	23	166	intron_retention	TRUE	non_canonical	0	0	junction_2	88.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476479	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29481058_29495240
ES.4503.4	chr11	+	2811	15	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	-22	173	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	61.3790913678498	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATATTTTCCCTTCA	NA	False	NA	6	True	NA	NA	NA	29476385	29495452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29476692_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.40	chr11	+	2810	15	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	37	166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	63.654400107622	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476493	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912_29495156_29495246
ES.4503.41	chr11	+	3064	11	ISM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	5927	-166	-915	166	3prime_fragment	FALSE	canonical	3	166	junction_2	31.1518859782197	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	75	False	NA	-1	True	NA	NA	NA	29482374	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.42	chr11	+	2733	8	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	9149	0	2316	0	3prime_fragment	FALSE	canonical	3	212	junction_2	21.2929038672991	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	3306	False	NA	NA	False	NA	NA	NA	29485605	29495248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.43	chr11	+	2010	6	NNC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	-1287	166	intron_retention	FALSE	canonical	2	6	junction_3	93.6961045081384	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	6384	False	NA	-1	True	NA	NA	NA	29488683	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29488794_29490067_29490273_29490608_29490822_29491340_29491482_29492344_29492510_29494269
ES.4503.44	chr11	+	1438	6	ISM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	13619	-165	96	165	3prime_fragment	FALSE	canonical	3	218	junction_2	21.540659228538	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGGTAAATATTT	7767	False	NA	-2	True	NA	NA	NA	29490066	29495444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.45	chr11	+	185	1	NIC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	2445	579	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATAGTATTCTAGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	29492415	29492600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29492400_29492600
ES.4503.46	chr11	+	1290	1	Genic_Genomic	ENSMUSG00000020459.15	novel	NA	NA	NA	NA	4185	166	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29494155	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_29494200_29495400
ES.4503.5	chr11	+	2659	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	-57	-177	-17	177	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTTCCCTTCATTTA	NA	False	NA	10	True	NA	NA	NA	29476390	29495456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.8	chr11	+	2824	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	-46	-37	3	6	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	29476410	29495285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4503.9	chr11	+	2512	13	NIC	ENSMUSG00000020459.15	novel	2425	14	NA	NA	7	166	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	79.8027081133355	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGTAAATATTTT	NA	False	NA	-1	True	NA	NA	NA	29476414	29495445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29476488_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ES.4504.1	chr11	-	1960	2	Antisense	novelGene_ENSMUSG00000020459.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29490272	29486616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29486972_29488667
ES.4505.1	chr11	-	868	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	-50	-27	-50	27	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATGTTTCTTTGGCTG	NA	False	NA	-4	True	AATAAA	-43	NA	29498159	29495818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ES.4505.12	chr11	-	579	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5362.30439270282	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497901	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29496030_29496290_29496423_29496702_29496782_29497201_29497261_29497680_29497746_29497840
ES.4505.13	chr11	-	1976	1	NIC	ENSMUSG00000020460.16	novel	637	5	NA	NA	38	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	820	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497822	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29495800_29497800
ES.4505.15	chr11	-	555	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6412.55357560465	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497878	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497738_29497836
ES.4505.18	chr11	-	971	5	NNC	ENSMUSG00000020460.16	novel	928	5	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_4	5966.04937856703	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497875	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29496030_29496290_29496423_29496702_29497261_29497680_29497740_29497836
ES.4505.20	chr11	-	1728	2	NIC	ENSMUSG00000020460.16	novel	928	5	NA	NA	6	-1	intron_retention	FALSE	canonical	3	11093	junction_1	0	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497854	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29496423_29496702
ES.4505.21	chr11	-	997	5	NIC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-5	-1	intron_retention	FALSE	canonical	0	0	junction_3	5984.48696631549	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497896	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497746_29497840
ES.4505.26	chr11	-	1260	4	NIC	ENSMUSG00000020460.16	novel	928	5	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	7569	junction_3	1572.56626781407	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTAGTATTGTGCTTTAT	NA	False	NA	-33	True	AATAAA	-14	NA	29497902	29495847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29496423_29496702_29497261_29497680_29497746_29497840
ES.4505.28	chr11	-	636	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6097.42649320187	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTAGTATTGTGCTTTA	NA	False	NA	-34	True	AATAAA	-13	NA	29497902	29495848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29496030_29496290_29496478_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ES.4505.3	chr11	-	534	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6095.7720101723	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497903	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29496030_29496290_29496423_29496752_29496789_29497205_29497261_29497680_29497746_29497840
ES.4505.5	chr11	-	1467	3	ISM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	6	1	6	-1	intron_retention	FALSE	canonical	3	11093	junction_2	2695.5	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497854	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_29496030_29496290_29496423_29496702
ES.4505.6	chr11	-	1003	5	FSM	ENSMUSG00000020460.16	ENSMUST00000150739.2	928	5	-23	-52	-14	-1	multi-exon	FALSE	canonical	3	7569	junction_4	3562.36217277244	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497905	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_29496030_29496290_29496423_29496702_29497261_29497680_29497746_29497840
ES.4505.7	chr11	-	803	5	NIC	ENSMUSG00000020460.16	novel	791	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_2	4080.02257959438	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTATTGTGCTTTATT	NA	False	NA	-32	True	AATAAA	-15	NA	29497861	29495846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ES.4506.1	chr11	-	227	1	Intergenic	novelGene_3475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	29503306	29503079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29503100_29503300
ES.4507.1	chr11	+	3348	1	Intergenic	novelGene_3476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGTTATACTATATT	NA	False	NA	NA	False	TTTAAA	-8	NA	29539475	29542823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29539500_29542800
ES.4508.1	chr11	+	147	1	Intergenic	novelGene_3477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAGACATA	NA	False	NA	NA	False	NA	NA	NA	29543976	29544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29544000_29544100
ES.4508.2	chr11	+	254	1	Intergenic	novelGene_3478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGAATGTGGGATGAGT	NA	False	NA	NA	False	NA	NA	NA	29543977	29544231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29544000_29544200
ES.4509.1	chr11	+	1437	1	NIC	ENSMUSG00000086707.2	novel	520	2	NA	NA	468	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29546254	29547691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29546300_29547700
ES.451.1	chr1	+	205	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCATCACTGCTGAAGA	NA	False	NA	NA	False	AAAAAG	-4	NA	52730565	52730770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_52730600_52730800
ES.4510.1	chr11	-	872	1	Intergenic	novelGene_3479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGCTTAAAATAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	29553996	29553124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29553100_29554000
ES.4511.1	chr11	+	182	1	Intergenic	novelGene_3480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29583537	29583719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29583500_29583700
ES.4512.1	chr11	+	207	1	Intergenic	novelGene_3481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGCCGCAGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	29616742	29616949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29616700_29616900
ES.4513.1	chr11	-	168	1	Intergenic	novelGene_3482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCAGAGCGAGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	29630801	29630633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29630600_29630800
ES.4514.1	chr11	+	136	1	Intergenic	novelGene_3483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	29632797	29632933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29632800_29632900
ES.4515.1	chr11	+	1545	7	NNC	ENSMUSG00000020458.17	novel	697	5	NA	NA	-8359	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	341.017472670634	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29634587	29692917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29634679_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.10	chr11	+	1577	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	0	2038	0	8	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCTGTTGCAGGTAGT	NA	False	NA	15	True	AATAAA	-23	NA	29642946	29692293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.11	chr11	+	2248	8	FSM	ENSMUSG00000020458.17	ENSMUST00000102842.10	2257	8	10	-1	9	1	multi-exon	FALSE	canonical	0	0	junction_2	364.665796116311	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29642956	29692917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643694_29655534_29655592_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.12	chr11	+	3995	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	396.396877352736	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTGTGTTTAGTGTT	NA	False	NA	11	True	AATAAA	-11	NA	29642956	29692913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643084_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.14	chr11	+	4592	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	12	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	409.85376584216	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGTTTAGTGTTT	NA	False	NA	12	True	AATAAA	-12	NA	29642959	29692914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655592_29656409_29658760_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.15	chr11	+	3751	1	NIC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	24	-45389	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTACGTGCACAGG	NA	False	NA	NA	False	NA	NA	NA	29642971	29646722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29643000_29646700
ES.4515.16	chr11	+	4524	8	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	26	-1	intron_retention	FALSE	canonical	0	0	junction_2	395.665752567874	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642973	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655596_29656409_29658771_29683632_29683841_29686359_29686499_29691499_29691547_29691694_29691754_29691986
ES.4515.17	chr11	+	2252	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	27	-1	intron_retention	FALSE	canonical	0	0	junction_2	429.531703573787	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642974	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655592_29656409_29656440_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691700_29691754_29691986
ES.4515.19	chr11	+	2101	6	NIC	ENSMUSG00000020458.17	novel	3615	7	NA	NA	29	1	intron_retention	FALSE	canonical	0	0	junction_3	362.158307926244	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29642976	29692917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29643694_29683632_29683841_29686359_29686499_29691499_29691547_29691694_29691754_29691986
ES.4515.2	chr11	+	4700	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	-76	-6	-76	6	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTGTTTTAGTTTCA	NA	False	NA	20	True	AATAAA	-20	NA	29642870	29692922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.21	chr11	+	3138	3	ISM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	35	34138	34	-33333	5prime_fragment	FALSE	canonical	0	0	junction_2	120	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCACCGTCTCACCAAC	NA	False	NA	NA	False	AATAAA	-16	NA	29642981	29658778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29643694_29655534_29655592_29656409
ES.4515.22	chr11	+	3694	6	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	43	-3906	intron_retention	FALSE	canonical	0	0	junction_2	348.327087663305	692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAGACAAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	29642990	29688205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29687979
ES.4515.23	chr11	+	4444	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	45	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	399.534103675769	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642992	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655596_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29692117
ES.4515.25	chr11	+	4509	8	NIC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	60	-1	intron_retention	FALSE	canonical	0	0	junction_2	396.9115976216	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29643007	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691694_29691754_29691986
ES.4515.27	chr11	+	1746	8	NNC	ENSMUSG00000020458.17	novel	2257	8	NA	NA	94	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.327238453047	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGTTTAGTGTTT	NA	False	NA	12	True	AATAAA	-12	NA	29643041	29692914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643118_29643474_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.29	chr11	+	4050	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102841.8	4060	9	9	1	9	-1	multi-exon	FALSE	canonical	0	0	junction_2	396.201653202003	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29643782	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643963_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.3	chr11	+	2243	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	-41	1413	-41	2	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTAGTGTTTTAGT	NA	False	NA	16	True	AATAAA	-16	NA	29642905	29692918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.30	chr11	+	2769	2	NNC	ENSMUSG00000020458.17	novel	4060	9	NA	NA	101	-45389	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTACGTGCACAGG	NA	False	NA	NA	False	NA	NA	NA	29643874	29646722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29646372_29646450
ES.4515.31	chr11	+	3869	8	ISM	ENSMUSG00000020458.17	ENSMUST00000102841.8	4060	9	11760	3	11760	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	341.972191255132	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTGTGTTTAGTGTT	NA	False	NA	11	True	AATAAA	-11	NA	29655533	29692913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.32	chr11	+	2574	7	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	-10933	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	358.782044639298	733	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29657629	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691518_29691547_29691694_29691754_29691986
ES.4515.33	chr11	+	1619	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	152	2	152	-2	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGTTTAGTGTTT	NA	False	NA	12	True	AATAAA	-12	NA	29668714	29692914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.34	chr11	+	973	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	165	635	165	-4	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTGTTATATTCT	NA	False	NA	3	True	AATAAA	-11	NA	29668727	29692281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.35	chr11	+	1452	6	ISM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	15069	2	-66	-2	3prime_fragment	FALSE	canonical	3	887	junction_5	19.4874318472189	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGTGTTTAGTGTTT	NA	False	NA	12	True	AATAAA	-12	NA	29683631	29692914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.36	chr11	+	5619	3	FSM	ENSMUSG00000020458.17	ENSMUST00000126162.2	907	3	-4082	-630	516	-1	multi-exon	FALSE	canonical	3	887	junction_2	11.5	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29686915	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29691547_29691694_29691754_29691986
ES.4515.5	chr11	+	4620	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	-13	1	intron_retention	FALSE	non_canonical	0	0	junction_2	355.342066711781	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTAGTGTTTTAG	NA	False	NA	15	True	AATAAA	-15	NA	29642933	29692917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655591_29656420_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.6	chr11	+	1852	3	NNC	ENSMUSG00000020458.17	novel	3615	7	NA	NA	-10	-1	intron_retention	TRUE	non_canonical	0	0	junction_2	252	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642936	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29683632_29683807_29691994
ES.4515.7	chr11	+	2286	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	404.083047621402	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTTTAGTGTTTT	NA	False	NA	13	True	AATAAA	-13	NA	29642946	29692915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_29643694_29655534_29655592_29656409_29656440_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4515.9	chr11	+	3996	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	0	622	0	9	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGCAGGTAGTC	NA	False	NA	16	True	AATAAA	-24	NA	29642946	29692294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ES.4516.1	chr11	+	276	1	Intergenic	novelGene_3487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	2986	False	NA	NA	False	ATTAAA	-18	NA	29710731	29711007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29710700_29711000
ES.4517.1	chr11	+	186	1	Intergenic	novelGene_3489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAAAATGCCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	29921339	29921525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_29921300_29921500
ES.4518.1	chr11	-	141	1	Intergenic	novelGene_3484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGATCATGG	NA	False	NA	NA	False	NA	NA	NA	29635817	29635676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29635700_29635800
ES.4519.1	chr11	-	1929	1	Antisense	novelGene_ENSMUSG00000020458.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATTCCCAGAATTTAT	NA	False	NA	NA	False	NA	NA	NA	29643550	29641621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29641600_29643600
ES.452.1	chr1	-	4697	7	NNC	ENSMUSG00000041439.16	novel	4932	7	NA	NA	-6894	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	4.06885187191123	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTCTCTTGAGATCCT	NA	False	NA	0	True	NA	NA	NA	52773515	52695445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52697705_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322_52748915_52773309
ES.452.2	chr1	-	4936	7	FSM	ENSMUSG00000041439.16	ENSMUST00000156876.8	4932	7	-22	18	-22	-18	multi-exon	FALSE	canonical	2	6	junction_6	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTTGAGAATTTTATA	NA	False	NA	-17	True	NA	NA	NA	52766643	52695462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52697705_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322_52748915_52766181
ES.452.3	chr1	-	4658	8	NNC	ENSMUSG00000041439.16	novel	4932	7	NA	NA	46	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	3.88087934491604	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACTTGATTTGAGAATT	NA	False	NA	-22	True	NA	NA	NA	52766471	52695467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52697705_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322_52748915_52766181_52766310_52766410
ES.4520.1	chr11	-	177	1	Intergenic	novelGene_3485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAAAAAAAAGGGTA	NA	False	NA	NA	False	NA	NA	NA	29645861	29645684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29645700_29645900
ES.4521.1	chr11	-	2117	1	Intergenic	novelGene_3486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTTGGGCTCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	29654882	29652765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29652800_29654900
ES.4522.1	chr11	-	2938	1	Antisense	novelGene_ENSMUSG00000020458.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCTGGAACTCAACTCT	NA	False	NA	NA	False	NA	NA	NA	29669457	29666519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_29666500_29669500
ES.4523.1	chr11	-	8043	43	NNC	ENSMUSG00000044072.15	novel	8083	42	NA	NA	58	8452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.10861397398312	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTGTTCTTTGAGAG	NA	False	NA	NA	False	TATAAA	-13	NA	29975975	29684595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29684617_29693050_29694611_29696247_29696349_29696757_29696912_29697429_29697534_29699258_29699422_29699804_29699978_29701188_29701378_29702435_29702551_29703063_29703222_29704847_29705057_29708933_29709108_29710021_29710121_29711592_29711723_29714047_29714127_29727002_29727130_29727243_29727446_29734063_29734241_29735666_29735756_29741972_29742105_29742259_29742413_29745220_29745363_29752429_29752558_29753055_29753168_29755031_29755235_29755713_29755815_29759313_29759408_29768341_29768448_29768905_29769093_29771638_29771758_29781098_29781206_29783054_29783223_29788426_29788640_29798814_29799072_29800817_29800956_29804050_29804253_29830646_29830783_29831957_29832144_29843187_29843257_29847143_29847243_29856171_29856332_29974379_29975101_29975889
ES.4523.2	chr11	-	7917	42	NNC	ENSMUSG00000044072.15	novel	8083	42	NA	NA	85	8452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.12195121951219	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTGTTCTTTGAGAG	NA	False	NA	NA	False	TATAAA	-13	NA	29975948	29684595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29684617_29693050_29694611_29696247_29696349_29696757_29696912_29697429_29697534_29699258_29699422_29699804_29699978_29701188_29701378_29702435_29702551_29703063_29703222_29704847_29705057_29708933_29709108_29711592_29711723_29714047_29714127_29727002_29727130_29727243_29727446_29734063_29734241_29735666_29735756_29741972_29742105_29742259_29742413_29745220_29745363_29752429_29752558_29753055_29753168_29755031_29755235_29755713_29755815_29759313_29759408_29768341_29768448_29768905_29769093_29771638_29771758_29781098_29781206_29783054_29783223_29788426_29788640_29798814_29799072_29800817_29800956_29804050_29804253_29830646_29830783_29831957_29832144_29843187_29843257_29847143_29847243_29856171_29856332_29974379_29975101_29975889
ES.4523.3	chr11	-	8568	30	NNC	ENSMUSG00000044072.15	novel	8083	42	NA	NA	-3344	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.20640384031282	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGTTCTTAAGCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	29775006	29693044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29694611_29696247_29696349_29696757_29696912_29697429_29697534_29699258_29699422_29699804_29699978_29701188_29701378_29702435_29702551_29703063_29703222_29704847_29705057_29708933_29709108_29710021_29710121_29711592_29711723_29714047_29714127_29727002_29727130_29727243_29727446_29734063_29734241_29735666_29735756_29741972_29742105_29742259_29742413_29745220_29745363_29752429_29752558_29753055_29753168_29755031_29755235_29755713_29755815_29759313_29759408_29768341_29768448_29768905_29769093_29771638_29771758_29771924
ES.4523.4	chr11	-	3972	9	NIC	ENSMUSG00000044072.15	novel	2432	14	NA	NA	-3579	-3	intron_retention	FALSE	canonical	0	0	junction_4	1.53602571593056	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATTCTTTGTTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	29705044	29693050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_29694611_29696247_29696349_29696757_29696912_29697429_29697534_29699258_29699422_29699804_29699978_29701188_29702551_29703063_29703222_29704847
ES.4523.5	chr11	-	255	1	Intergenic	novelGene_3488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGACCTACCTTTGTC	NA	False	NA	NA	False	AATAAA	-44	NA	29781973	29781718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_29781700_29782000
ES.4523.6	chr11	-	1980	2	NNC	ENSMUSG00000044072.15	novel	8083	42	NA	NA	-6	-213321	intron_retention	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTTTGTTCTGTCT	NA	False	NA	NA	False	TTTAAA	-12	NA	29976039	29972663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_29972984_29974379
ES.4524.1	chr11	+	154	1	Intergenic	novelGene_3490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATAAACTG	NA	False	NA	NA	False	NA	NA	NA	30031299	30031453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30031300_30031500
ES.4525.1	chr11	+	7642	18	Antisense	novelGene_ENSMUSG00000020315.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.235294117647059	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTGTTCATGTTCA	NA	False	NA	NA	False	NA	NA	NA	30067153	30100107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_30068011_30068290_30068496_30069376_30069507_30070528_30070814_30070977_30071066_30071475_30071701_30073798_30074062_30074864_30075013_30079569_30079663_30085941_30087633_30088365_30088502_30088591_30090627_30092121_30092420_30093015_30093177_30094104_30094222_30095826_30096015_30096737_30096854_30099501
ES.4525.2	chr11	+	3375	3	Antisense	novelGene_ENSMUSG00000020315.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGTGTTCATGTTCA	NA	False	NA	NA	False	NA	NA	NA	30092479	30100107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_30094222_30095826_30096854_30099501
ES.4526.1	chr11	+	6680	1	Intergenic	novelGene_3491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCTCTCAGAAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	30186398	30193078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30186400_30193100
ES.4527.1	chr11	+	1559	1	Intergenic	novelGene_3492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAAAATTTTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	30213232	30214791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30213200_30214800
ES.4528.1	chr11	+	903	2	FSM	ENSMUSG00000073073.5	ENSMUST00000146985.2	1499	2	170	426	170	-426	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGATACTCTTTAGC	NA	False	NA	NA	False	AATAAA	-12	NA	30217633	30230065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30217911_30229439
ES.4529.1	chr11	-	8530	36	FSM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	-65	-4	-59	4	multi-exon	FALSE	canonical	3	15	junction_35	139.777607619521	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTAGCCGGTGTTTTTC	1454	False	NA	-3	True	ATTAAA	-19	NA	30218234	30049390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
ES.4529.10	chr11	-	8528	35	NNC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	122.092964750318	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1865	False	NA	-7	True	ATTAAA	-15	NA	30148212	30049394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060917_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.14	chr11	-	8221	35	NNC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	351	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	122.503117678002	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	2171	False	NA	-7	True	ATTAAA	-15	NA	30147906	30049394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099506_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.15	chr11	-	10160	34	NIC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	11	0	intron_retention	FALSE	canonical	3	341	junction_31	82.3628782269387	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1831	False	NA	-7	True	ATTAAA	-15	NA	30148246	30049394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30050715_30051612_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.16	chr11	-	8552	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	123.030213325847	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	1840	False	NA	-8	True	ATTAAA	-14	NA	30148237	30049395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079655_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.17	chr11	-	8138	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	37456	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	123.034994459266	649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	4063	False	NA	-8	True	ATTAAA	-14	NA	30110801	30049395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30110707
ES.4529.2	chr11	-	8890	35	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	-310	1	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGACTAGCCGGTGTTT	1510	False	NA	-6	True	ATTAAA	-16	NA	30148567	30049393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.22	chr11	-	4733	16	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	-27967	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	159.133766233177	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	NA	False	NA	-8	True	ATTAAA	-14	NA	30089326	30049395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054523_30068448_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591
ES.4529.23	chr11	-	8566	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	122.792356450913	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	1821	False	NA	-8	True	ATTAAA	-14	NA	30148256	30049395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063984_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.26	chr11	-	5950	3	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	-1647	0	intron_retention	FALSE	canonical	3	552	junction_1	59.5	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	NA	False	NA	-8	True	ATTAAA	-14	NA	30057257	30049395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30050715_30051612_30053422_30054435
ES.4529.28	chr11	-	8540	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	122.660406242257	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	1833	False	NA	-9	True	ATTAAA	-13	NA	30148244	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30074989_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.30	chr11	-	4877	21	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	-25822	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	178.099094607468	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	NA	False	NA	-9	True	ATTAAA	-13	NA	30087181	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073794_30074063_30074865_30075013_30079569_30079661_30086001_30086143_30086873
ES.4529.35	chr11	-	8754	36	NNC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.430935530601	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	1816	False	NA	-9	True	ATTAAA	-13	NA	30148261	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054149_30054323_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.36	chr11	-	6260	26	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	-30820	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	130.820402078575	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	8274	False	NA	-9	True	ATTAAA	-13	NA	30092179	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050115_30050461_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119
ES.4529.40	chr11	-	8567	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135.25118244563	650	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	1822	False	NA	-9	True	ATTAAA	-13	NA	30148255	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051650_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073800_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.42	chr11	-	6434	26	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	130.574031108793	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGACTAGCCGGTG	1823	False	NA	-9	True	ATTAAA	-13	NA	30148254	30049396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30088690_30104271_30104403_30109293_30109446_30147723
ES.4529.44	chr11	-	8306	36	NNC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.31078657224	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGACTAGCCGG	1824	False	NA	-11	True	ATTAAA	-11	NA	30148253	30049398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30049648_30049912_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.46	chr11	-	8589	35	NNC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	117.175868915299	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGACTAGCCGG	1824	False	NA	-11	True	ATTAAA	-11	NA	30148253	30049398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054417_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.48	chr11	-	8256	35	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	4	-318	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTGGAACTGAAGCAT	1824	False	NA	NA	False	AATAAA	-39	NA	30148253	30049713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.49	chr11	-	7320	35	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	317	-941	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGGGGTGGGGGAAC	2137	False	NA	NA	False	AATAAA	-20	NA	30147940	30050336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.50	chr11	-	9270	31	FSM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	-165	2	-165	-2	multi-exon	FALSE	canonical	3	341	junction_28	71.9392953970375	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTGGTGTGGGGTTTTC	1655	False	NA	NA	False	CATAAA	-16	NA	30148422	30056786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.52	chr11	-	8995	31	FSM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	2	110	2	-110	multi-exon	FALSE	canonical	3	341	junction_28	71.9392953970375	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGGCATGCTTACAA	1822	False	NA	NA	False	ATTAAA	-14	NA	30148255	30056894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.53	chr11	-	6689	28	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	-4	5789	-4	-2626	5prime_fragment	FALSE	canonical	3	341	junction_25	71.7849631384222	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGGGCTGGCTGAAG	1816	False	NA	NA	False	NA	NA	NA	30148261	30062573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.54	chr11	-	2011	11	NNC	ENSMUSG00000020315.19	novel	9107	31	NA	NA	-13572	-2936	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	160.395261775403	594	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAAAGAAATGATT	3983	False	NA	NA	False	NA	NA	NA	30074931	30062883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070568_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865
ES.4529.55	chr11	-	8025	25	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	-134	8923	-134	-5760	5prime_fragment	FALSE	canonical	3	341	junction_22	62.5930418568142	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	1686	False	NA	NA	False	NA	NA	NA	30148391	30065707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ES.4529.56	chr11	-	2679	1	NIC	ENSMUSG00000020315.19	novel	8461	36	NA	NA	-7027	-5760	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	571	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	30068386	30065707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30065700_30068400
ES.4529.57	chr11	-	7784	26	ISM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	-17	16319	-11	-5766	5prime_fragment	FALSE	canonical	3	15	junction_25	126.028860186864	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAGAGAGAGAGAGAGA	1502	False	NA	NA	False	NA	NA	NA	30218186	30065713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
ES.4529.58	chr11	-	741	3	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	67	47496	67	-44333	5prime_fragment	FALSE	canonical	3	375	junction_1	30	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACCGGCTGACCCTCG	1887	False	NA	NA	False	NA	NA	NA	30148190	30104280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30104403_30109293_30109446_30147723
ES.4529.59	chr11	-	5155	2	Genic_Genomic	ENSMUSG00000020315.19	novel	9107	31	NA	NA	36	26943	multi-exon	FALSE	non_canonical	0	0	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTATGTATTGATTGA	1856	False	NA	NA	False	ATTAAA	-17	NA	30148221	30139715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_30144105_30147455
ES.453.1	chr1	-	5798	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-29	-2	-29	2	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGGGTATAAAATATT	NA	False	NA	NA	False	NA	NA	NA	52856876	52824583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ES.453.2	chr1	-	2377	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-55	3445	-55	796	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	52856902	52828030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ES.453.3	chr1	-	1826	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	-57	3998	-57	243	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAACTGTACAGTTCAA	NA	False	NA	NA	False	AATAAA	-14	NA	52856904	52828583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ES.453.4	chr1	-	2235	7	NNC	ENSMUSG00000026102.10	novel	5767	6	NA	NA	-27084	160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.78593889720018	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAGTTGGTATATGACA	NA	False	NA	NA	False	AGTAAA	-20	NA	52883931	52828666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52881882_52881957_52883169
ES.4530.1	chr11	-	135	1	Intergenic	novelGene_3493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGGAGACAGGAAAG	3740	False	NA	NA	False	NA	NA	NA	30252306	30252171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30252200_30252300
ES.4531.1	chr11	+	182	1	Intergenic	novelGene_3494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAATTCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30423568	30423750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30423600_30423800
ES.4532.1	chr11	+	184	1	Intergenic	novelGene_3495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACCCAAGAATAGCTTTA	NA	False	NA	5	True	NA	NA	NA	30432655	30432839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30432700_30432800
ES.4533.1	chr11	-	4641	4	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	-28815	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.6707311029399	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTGTACTGTTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	30628402	30455991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30456440_30582207_30582334_30599300_30599594_30624628
ES.4533.2	chr11	-	546	3	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	182	-134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.5	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGATATGAACATTCAAG	NA	False	NA	NA	False	AATAAA	-16	NA	30599405	30456124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30456440_30582207_30582334_30599300
ES.4533.3	chr11	-	182	1	Intergenic	novelGene_3496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	980	False	NA	NA	False	NA	NA	NA	30470900	30470718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30470700_30470900
ES.4533.4	chr11	-	3487	7	NNC	ENSMUSG00000060923.6	novel	863	4	NA	NA	-49585	-73002	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCTAGTGTTGACCG	344	False	NA	NA	False	NA	NA	NA	30649172	30528992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30529216_30582207_30582334_30592363_30592427_30593735_30593804_30599300_30599594_30624628_30624838_30646667
ES.4533.5	chr11	-	5450	2	Intergenic	novelGene_3497	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGCCTTCTACATTTCC	323	False	NA	NA	False	AATAAA	-17	NA	30649193	30641322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30642173_30644593
ES.4534.1	chr11	+	1356	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-1054	-581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.09901951359278	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCCTCTTAAAAACTGAT	NA	False	NA	NA	False	NA	NA	NA	30699777	30705566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30699880_30700139_30700269_30701058_30701181_30704563
ES.4534.2	chr11	+	3231	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-925	1227	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.49691252107735	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGCTTCTTTGCCAAA	NA	False	NA	NA	False	NA	NA	NA	30699906	30707374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700007_30700139_30700269_30700989_30701181_30704563
ES.4534.3	chr11	+	470	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-917	-1457	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATACTCAACCAGTTCA	NA	False	NA	NA	False	NA	NA	NA	30699914	30704690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700007_30700139_30700269_30701058_30701181_30704563
ES.4534.4	chr11	+	644	3	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-889	-1457	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATACTCAACCAGTTCA	NA	False	NA	NA	False	NA	NA	NA	30699942	30704690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700269_30700989_30701181_30704563
ES.4534.5	chr11	+	3696	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-889	1728	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.49691252107735	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTCTGATGCTATTT	NA	False	NA	NA	False	NA	NA	NA	30699942	30707875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700007_30700139_30700269_30700989_30701181_30704563
ES.4534.6	chr11	+	3919	3	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-889	1818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCATCTGTAATGTATG	NA	False	NA	NA	False	NA	NA	NA	30699942	30707965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700269_30700989_30701181_30704563
ES.4534.7	chr11	+	3711	4	NNC	ENSMUSG00000087474.2	novel	1933	2	NA	NA	-880	1821	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCTGTAATGTATGATG	NA	False	NA	NA	False	NA	NA	NA	30699951	30707968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30700007_30700139_30700269_30701058_30701181_30704563
ES.4535.1	chr11	-	860	1	Intergenic	novelGene_3498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30710455	30709595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30709600_30710500
ES.4536.1	chr11	+	6180	49	NNC	ENSMUSG00000040850.18	novel	579	5	NA	NA	-258	55128	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.533369656912	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAAGACTCTGCCAA	NA	False	NA	NA	False	NA	NA	NA	30721467	30885489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30721565_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30777008_30777070_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663_30830359_30885456
ES.4536.100	chr11	+	2065	11	NNC	ENSMUSG00000020305.14	novel	3330	11	NA	NA	-6	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.4847792511421	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGGTGCTGGATGTG	NA	False	NA	9	True	AATAAA	-9	NA	30904412	31051467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31013995_31014088_31031361_31031623_31035000_31035132_31051036
ES.4536.101	chr11	+	5847	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	33	-2652	9	2652	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTCTGAGAATAACTTG	NA	False	NA	NA	False	AATAAA	-17	NA	30904427	31055356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ES.4536.102	chr11	+	1941	11	NNC	ENSMUSG00000020305.14	novel	3330	11	NA	NA	11	142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.6635853144922	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGATGTGACTTCTTT	NA	False	NA	17	True	AATAAA	-17	NA	30904429	31051475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005574_31006101_31006238_31008821_31009000_31011388_31011587_31013995_31014088_31031479_31031623_31035000_31035132_31051036
ES.4536.103	chr11	+	3171	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	59	-2	6	2	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATTATTGTGGTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30904453	31052706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ES.4536.104	chr11	+	1172	3	ISM	ENSMUSG00000020305.14	ENSMUST00000117883.2	2509	9	42	56343	13	1	5prime_fragment	FALSE	canonical	3	82	junction_2	1.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCTGTGAATATAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	30904460	30979761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30904570_30948312_30948522_30978907
ES.4536.105	chr11	+	3166	10	NNC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	66	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	26.6073414170591	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTATTATTGTGGTTTTC	NA	False	NA	NA	False	TATAAA	-16	NA	30904513	31052706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30904625_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ES.4536.106	chr11	+	2194	1	Antisense	novelGene_ENSMUSG00000020309.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCATAGTGGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	30924618	30926812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_30924600_30926800
ES.4536.107	chr11	+	7501	3	ISM	ENSMUSG00000020305.14	ENSMUST00000137306.8	3330	11	120280	1235	16091	136	3prime_fragment	FALSE	canonical	3	77	junction_1	5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTGCTGGATGTGAC	NA	False	NA	11	True	AATAAA	-11	NA	31024685	31051469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_31031623_31035000_31035132_31051036
ES.4536.108	chr11	+	5230	4	NNC	ENSMUSG00000020305.14	novel	1813	10	NA	NA	16925	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.870154217457	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGCTGGATGTGA	NA	False	NA	10	True	AATAAA	-10	NA	31025519	31051468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_31029926_31031361_31031623_31035000_31035132_31051036
ES.4536.109	chr11	+	5544	4	NNC	ENSMUSG00000020305.14	novel	1813	10	NA	NA	16935	136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.870154217457	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTGCTGGATGTGAC	NA	False	NA	11	True	AATAAA	-11	NA	31025529	31051469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_31030249_31031361_31031623_31035000_31035132_31051036
ES.4536.11	chr11	+	6366	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	33	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	81.2477570440647	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721758	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.110	chr11	+	2409	1	Intergenic	novelGene_3504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTAAACTTCTTTGTC	NA	False	NA	NA	False	AATAAA	-23	NA	31028875	31031284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_31028900_31031300
ES.4536.111	chr11	+	4003	1	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	38873	137	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTGGATGTGACT	NA	False	NA	12	True	AATAAA	-12	NA	31047467	31051470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_31047500_31051500
ES.4536.14	chr11	+	6358	46	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	34	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	97.9431329085945	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721759	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800599_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.15	chr11	+	6063	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.0841502020503	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721759	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30721833_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.17	chr11	+	6427	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	37	27	37	-27	multi-exon	FALSE	canonical	2	239	junction_13	60.0854464039772	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721762	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.18	chr11	+	6582	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	37	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.927485061487	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721762	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30725419_30725575_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.19	chr11	+	6420	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	37	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	80.9254627994216	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721762	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755020_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.2	chr11	+	6580	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	-6	-83	-6	83	multi-exon	FALSE	canonical	2	239	junction_13	60.0854464039772	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGATTGCAGTTTTTGA	NA	False	NA	100	True	AATACA	-17	NA	30721719	30830444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.20	chr11	+	5299	42	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_41	71.8700658498291	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATTATGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	30721762	30807152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30806888
ES.4536.21	chr11	+	1684	10	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	37	69165	37	-2533	5prime_fragment	FALSE	canonical	3	306	junction_5	22.5246093127352	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTTATTATTTGCCT	NA	False	NA	NA	False	ATTAAA	-5	NA	30721762	30761196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782
ES.4536.22	chr11	+	6560	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	38	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	93.0332816220179	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721763	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30820581_30820716_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.23	chr11	+	6340	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	39	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	79.8840487684309	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721764	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770150_30771006_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.24	chr11	+	6329	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	39	-27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	82.005859471469	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721764	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.25	chr11	+	7040	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	46	-595	46	595	multi-exon	FALSE	canonical	2	239	junction_13	60.0854464039772	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGAATACTACAGTCA	NA	False	NA	NA	False	GATAAA	-34	NA	30721771	30830956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.26	chr11	+	3997	33	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	50	11126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	75.2519725655082	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGAGTCAAGTTGCTT	NA	False	NA	NA	False	AGTAAA	-22	NA	30721775	30795274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754282_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179
ES.4536.27	chr11	+	6343	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	50	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	81.9915503023797	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721775	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.29	chr11	+	10351	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	53	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	80.8235960979241	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721778	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30777070_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.3	chr11	+	6488	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	81.1071107952323	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721719	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789015_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.31	chr11	+	6400	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	55	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	77.8451276197803	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGTGATTTTAAAAATA	NA	False	NA	-23	True	AATAAA	-27	NA	30721780	30830321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815601_30824124_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.35	chr11	+	1509	8	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	55	72186	55	3799	5prime_fragment	FALSE	canonical	3	306	junction_5	24.9554705466373	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCATATGGTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	30721780	30758175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702
ES.4536.37	chr11	+	7582	46	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	55	0	55	0	intron_retention	FALSE	canonical	2	239	junction_13	56.1404939569327	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATTGTTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	30721780	30830361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378
ES.4536.39	chr11	+	6142	45	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	112.146328830898	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACACCATGGCTGATTG	NA	False	NA	10	True	AATAAA	-12	NA	30721780	30830354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762158_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784148_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.4	chr11	+	6556	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	95.8345157746513	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721724	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30751297_30751364_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.41	chr11	+	5527	43	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	55	14547	55	-8390	5prime_fragment	FALSE	canonical	2	239	junction_13	49.3234959855425	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTGTCTTCTCACAGCT	NA	False	NA	NA	False	GATAAA	-19	NA	30721780	30815814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433
ES.4536.42	chr11	+	6369	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	55	-58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_45	80.3203416195598	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGTATGTGTATACAA	NA	False	NA	-41	True	AATAAA	-9	NA	30721780	30830303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828387_30828518_30829663
ES.4536.45	chr11	+	6364	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	58	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.2882989929625	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721783	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30721890_30721956_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.47	chr11	+	6603	49	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	118.333568074885	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATTGTTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	30721787	30830361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30777008_30777070_30780349_30780406_30780837_30780951_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.49	chr11	+	5945	20	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	63	-6663	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	79.9074949941036	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTTTGCGTGTCAAA	NA	False	NA	NA	False	AATAAA	-15	NA	30721788	30776388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770145_30770915_30771074_30773058
ES.4536.5	chr11	+	6816	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	3	-328	3	328	multi-exon	FALSE	canonical	2	239	junction_13	60.0854464039772	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACCATTGTGTGACTTG	NA	False	NA	NA	False	NA	NA	NA	30721728	30830689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.54	chr11	+	6129	44	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	69	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_24	81.7920168377594	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721794	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.55	chr11	+	6506	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	69	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	109.145506146595	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721794	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767058_30767146_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784148_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.57	chr11	+	6158	45	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	73	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	82.5889296555712	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721798	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.59	chr11	+	3996	30	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	78	6559	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	75.8071117549523	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGAGAGTTCATCTTGG	NA	False	NA	NA	False	NA	NA	NA	30721803	30790707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30790312
ES.4536.6	chr11	+	6274	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	79.4769009069791	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721730	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.60	chr11	+	6474	48	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	95.7275587527086	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATTGTTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	30721803	30830361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30777008_30777070_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.61	chr11	+	6255	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	78	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_42	77.0884500804269	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	NA	False	NA	15	True	AATAAA	-17	NA	30721803	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.63	chr11	+	6361	47	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	94	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_43	77.8451276197803	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30721819	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824126_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.66	chr11	+	527	1	Intergenic	novelGene_3501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAAAAACATC	NA	False	NA	NA	False	NA	NA	NA	30745116	30745643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30745100_30745600
ES.4536.67	chr11	+	5711	44	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	31084	27	-8727	-27	3prime_fragment	FALSE	canonical	2	239	junction_10	61.4330046608087	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30752809	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.68	chr11	+	6438	41	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-6550	-27	intron_retention	FALSE	non_canonical	0	0	junction_10	102.945735098643	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30754986	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769459_30769549_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.69	chr11	+	6235	41	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-5248	795	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	85.2881549513178	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATCTGAAGAGAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	30756288	30831156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784148_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.7	chr11	+	1221	4	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	12	-11112	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	172.051026022967	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTATTTGTTTTTTGG	NA	False	NA	NA	False	ATTAAA	-19	NA	30721737	30743264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30742788
ES.4536.70	chr11	+	5398	40	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	35974	5	-3837	-5	3prime_fragment	FALSE	canonical	2	239	junction_6	61.8040529406835	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCATGGCTGATTGTT	NA	False	NA	12	True	AATAAA	-14	NA	30757699	30830356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.74	chr11	+	4874	35	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	3757	-27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	108.024703217321	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30765293	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30777008_30777070_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.76	chr11	+	12771	31	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	4098	-27	intron_retention	FALSE	canonical	2	270	junction_3	57.3005817306131	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30765634	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30765709_30767730_30769072_30769927_30770144_30770915_30771074_30773058_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.77	chr11	+	4163	30	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	48200	27	8389	-27	3prime_fragment	FALSE	canonical	2	270	junction_1	56.6026683908587	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30769925	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.78	chr11	+	4132	31	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-9152	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	143.574870131696	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGCTGATTGTTTTTT	NA	False	NA	16	True	AATAAA	-18	NA	30770949	30830360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30771074_30773058_30773155_30777008_30777070_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30820581_30820716_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.8	chr11	+	6167	46	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	92.3672754835115	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGGCTGATTGTTTT	NA	False	NA	14	True	AATAAA	-16	NA	30721740	30830358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815494_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.80	chr11	+	3085	19	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	60863	18002	206	5207	internal_fragment	FALSE	canonical	3	301	junction_5	39.3816793276603	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTCCTTCTACATACTA	NA	False	NA	NA	False	NA	NA	NA	30782588	30812359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347
ES.4536.81	chr11	+	3038	20	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	4897	-27	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	101.547690855113	572	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	561	False	NA	-10	True	AATAAA	-40	NA	30787279	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815494_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.84	chr11	+	2705	17	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	9614	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	113.093711142574	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGCTGATTGTTTTT	5278	False	NA	15	True	AATAAA	-17	NA	30791996	30830359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803341_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.85	chr11	+	1689	8	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	81449	27	387	-27	3prime_fragment	FALSE	canonical	3	413	junction_1	42.02671647844	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30803174	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.86	chr11	+	3075	1	Intergenic	novelGene_3503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	521	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	30808021	30811096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_30808000_30811100
ES.4536.87	chr11	+	2854	1	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	-5963	5207	mono-exon	FALSE	NA	NA	NA	NA	NA	527	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTCCTTCTACATACTA	NA	False	NA	NA	False	NA	NA	NA	30809505	30812359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30809500_30812400
ES.4536.88	chr11	+	2555	5	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	92741	-298	-1002	298	3prime_fragment	FALSE	canonical	3	444	junction_3	35.1567916624939	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTTTGTACAGATGC	1981	False	NA	NA	False	AATAAA	-18	NA	30814466	30830659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.89	chr11	+	3894	6	NNC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	5734	-28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	236.737829676628	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAAAGAACATC	8717	False	NA	-11	True	AATAAA	-39	NA	30821202	30830333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30821589_30821637_30822789_30822866_30824281_30826745_30826880_30828378_30828518_30829663
ES.4536.9	chr11	+	3483	17	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	16	6465	intron_retention	FALSE	canonical	3	239	junction_12	31.5275177424421	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGATGTTTCTCCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	30721741	30770194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927
ES.4536.90	chr11	+	812	2	ISM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	106651	27	12908	-27	3prime_fragment	FALSE	canonical	3	528	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAGAACATCA	NA	False	NA	-10	True	AATAAA	-40	NA	30828376	30830334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_30828518_30829663
ES.4536.91	chr11	+	2911	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	15	0	15	0	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTGTGTTACCTGCAC	4079	False	NA	NA	False	AATAAA	-24	NA	30835372	30843729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30835543_30840988
ES.4536.92	chr11	+	5256	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	29	-2359	29	2359	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGGGGGTTGGTT	4093	False	NA	NA	False	AATAAA	-16	NA	30835386	30846088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30835543_30840988
ES.4536.93	chr11	+	3308	11	NNC	ENSMUSG00000020305.14	novel	1813	10	NA	NA	-28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.0476137196133	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTATTATTGTGGTTTT	4094	False	NA	NA	False	TATAAA	-15	NA	30835387	31052705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30835543_30897287_30897387_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ES.4536.95	chr11	+	3832	1	NIC	ENSMUSG00000043999.7	novel	2926	2	NA	NA	4528	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGCAAAAAATAGAAGTG	8592	False	NA	NA	False	AATAAA	-12	NA	30839885	30843717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30839900_30843700
ES.4536.96	chr11	+	2159	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	-164	1233	-164	138	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCTGGATGTGACTT	NA	False	NA	13	True	AATAAA	-13	NA	30904230	31051471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ES.4536.97	chr11	+	5016	1	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	2	-70348	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGACCAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	30904396	30909412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30904400_30909400
ES.4536.98	chr11	+	1839	10	NNC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	4	137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.3946917449799	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTGGATGTGACT	NA	False	NA	12	True	AATAAA	-12	NA	30904409	31051470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011447_31031361_31031623_31035000_31035132_31051036
ES.4536.99	chr11	+	1780	9	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	5	137	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	27.5045450789501	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTGGATGTGACT	NA	False	NA	12	True	AATAAA	-12	NA	30904410	31051470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31031361_31031623_31035000_31035132_31051036
ES.4537.1	chr11	-	7154	1	Intergenic	novelGene_3499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30736122	30728968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30729000_30736100
ES.4537.2	chr11	-	224	1	Intergenic	novelGene_3500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGCAGTAAAAGCA	NA	False	NA	NA	False	AATAAA	-3	NA	30732999	30732775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30732800_30733000
ES.4538.1	chr11	-	7016	2	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCGCTAGGCCTTGTGG	4689	False	NA	NA	False	ACTAAA	-39	NA	30744405	30736700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30741233_30741921
ES.4538.2	chr11	-	7705	1	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCGCTAGGCCTTGTGG	4689	False	NA	NA	False	ACTAAA	-39	NA	30744405	30736700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30736700_30744400
ES.4539.1	chr11	-	175	1	Intergenic	novelGene_3502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAGAAA	1037	False	NA	NA	False	NA	NA	NA	30748057	30747882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_30747900_30748100
ES.454.1	chr1	+	1735	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-10	105	-8	-100	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTTCCTTTTTTAAA	NA	False	NA	26	True	AATAAA	-36	NA	52884194	52960040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ES.454.2	chr1	+	2041	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-10	-201	-8	201	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGTAAAGCAGTTTAAAA	NA	False	NA	NA	False	TATAAA	-19	NA	52884194	52960346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ES.454.3	chr1	+	3027	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	-5	-1192	-3	1192	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAACCCAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	52884199	52961337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ES.454.4	chr1	+	1588	12	FSM	ENSMUSG00000041426.13	ENSMUST00000159352.8	1704	12	33	83	0	-83	multi-exon	FALSE	canonical	0	0	junction_11	29.0121091845947	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATATGAATGTATTTTA	NA	False	NA	43	True	TATAAA	-13	NA	52884204	52960057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52959421
ES.454.5	chr1	+	1889	11	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	0	14597	0	5069	5prime_fragment	FALSE	canonical	3	80	junction_5	9.19565114605812	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAGAAGTCTCCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	52884204	52945548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529
ES.454.6	chr1	+	4961	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	64476	126	6889	-121	3prime_fragment	FALSE	canonical	3	97	junction_2	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGTGTTGATGCCT	9170	False	NA	5	True	AATAAA	-15	NA	52948680	52960019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_52953010_52955795_52955830_52959421
ES.4540.1	chr11	-	7460	6	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAGAAAGGAAAACAATT	9082	False	NA	NA	False	NA	NA	NA	30762587	30748562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30752859_30754289_30754440_30754962_30755026_30756253_30756327_30757699_30757824_30759833
ES.4540.2	chr11	-	8137	1	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30756734	30748597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30748600_30756700
ES.4540.3	chr11	-	3795	1	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-36	NA	30758003	30754208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30754200_30758000
ES.4541.1	chr11	-	4500	1	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	30803149	30798649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30798600_30803100
ES.4542.1	chr11	-	3266	1	Antisense	novelGene_ENSMUSG00000040850.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACTAAAAGATACCAAGT	NA	False	NA	NA	False	NA	NA	NA	30809002	30805736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_30805700_30809000
ES.4543.1	chr11	-	2421	12	NNC	ENSMUSG00000020311.18	novel	366	5	NA	NA	2793	31123	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	27.4759098090438	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTCTGTTTTTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30901359	30849650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30850987_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306
ES.4543.10	chr11	-	1848	13	NIC	ENSMUSG00000020311.18	novel	2532	14	NA	NA	1	146	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	27.4008312931479	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTTGTCTCACTTCAT	NA	False	NA	-18	True	GATAAA	-11	NA	30904334	30881604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.11	chr11	-	3834	3	NIC	ENSMUSG00000020311.18	novel	977	9	NA	NA	7830	0	intron_retention	FALSE	canonical	3	96	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATTGAAAATCATCACT	NA	False	NA	-33	True	ATTAAA	-26	NA	30890255	30881750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30884748_30884981_30885060_30889496
ES.4543.12	chr11	-	3892	13	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	74	1389	74	-412	5prime_fragment	FALSE	canonical	2	57	junction_7	15.9919684703152	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCTTTTATATGGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	30904078	30882162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.2	chr11	-	2146	14	NNC	ENSMUSG00000020311.18	novel	366	5	NA	NA	-23	6663	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.8292068982786	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTGGACTCCAGTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	30904358	30874110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30874594_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.3	chr11	-	2064	14	NNC	ENSMUSG00000020311.18	novel	366	5	NA	NA	-32	6641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9118657976376	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATAAAATTCAGTCT	NA	False	NA	NA	False	NA	NA	NA	30904367	30874132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30874525_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.4	chr11	-	4376	14	NNC	ENSMUSG00000020311.18	novel	366	5	NA	NA	40	4988	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9118657976376	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTCCTTTTTCATTCA	NA	False	NA	NA	False	NA	NA	NA	30904112	30875785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30878745_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.5	chr11	-	2313	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	24	195	24	-195	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTCATGTAATTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	30904128	30880968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.6	chr11	-	2325	15	NNC	ENSMUSG00000020311.18	novel	2532	14	NA	NA	-26	340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	32.5570143544132	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAGTAAAGATAATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	30904361	30881410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30902995_30903217_30903913
ES.4543.7	chr11	-	1928	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-209	813	-26	164	multi-exon	FALSE	canonical	2	57	junction_8	15.3746121325012	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTGGTCTTGTATG	NA	False	NA	0	True	GATAAA	-29	NA	30904361	30881586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ES.4543.8	chr11	-	1869	15	NNC	ENSMUSG00000020311.18	novel	2532	14	NA	NA	-25	148	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	26.0243214344284	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTCTCACTTCATTC	NA	False	NA	-16	True	GATAAA	-13	NA	30904360	30881602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913_30904139_30904180
ES.4543.9	chr11	-	3988	4	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	11068	829	5001	148	intron_retention	FALSE	canonical	3	85	junction_1	5.18544972870135	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTCTCACTTCATTC	NA	False	NA	-16	True	GATAAA	-13	NA	30893084	30881602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496
ES.4544.1	chr11	-	1336	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	-23	2	-23	-2	multi-exon	FALSE	canonical	3	30	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTCTAAGTGTCATTT	NA	False	NA	NA	False	AATAAA	-31	NA	30936373	30926708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30927747_30929564_30929601_30936111
ES.4544.2	chr11	-	1291	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-32	-241	-16	-4	multi-exon	FALSE	canonical	3	22	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTCTCTAAGTGTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	30936366	30926710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30927747_30936111
ES.4544.3	chr11	-	1046	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	-28	0	-12	0	multi-exon	FALSE	canonical	3	22	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTGTACTTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	30936362	30926951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_30927747_30936111
ES.4544.4	chr11	-	3404	1	Genic_Genomic	ENSMUSG00000020309.7	novel	NA	NA	NA	NA	-3	-5998	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAAACCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	30936353	30932949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_30932900_30936400
ES.4544.5	chr11	-	921	1	NIC	ENSMUSG00000020309.7	novel	1315	3	NA	NA	1	-8477	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGTGGAAAAAAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	30936349	30935428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_30935400_30936300
ES.4545.1	chr11	-	1857	5	NNC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	54	1902	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.8818921682095	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAGATCCT	NA	False	NA	NA	False	NA	NA	NA	31319993	31305404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31306098_31310001_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.10	chr11	-	3024	4	NNC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-1686	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.2107937254348	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAAAATATATATA	NA	False	NA	-49	True	NA	NA	NA	31321760	31307921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31310529_31315331_31315544_31317725_31317869_31321698
ES.4545.11	chr11	-	3188	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	68	684	41	-5	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACTGACTGATCTCTG	NA	False	NA	-118	True	CATAAA	-22	NA	31320006	31307990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.12	chr11	-	3745	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-94	2132	-94	-1453	intron_retention	FALSE	canonical	3	131	junction_2	15.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTGGGTCACAAAAACCA	NA	False	NA	NA	False	AATAAA	-17	NA	31320168	31309438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31310529_31315331_31315544_31317725
ES.4545.13	chr11	-	1935	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-130	2135	-130	-1456	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACTGGGTCACAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	31320204	31309441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.14	chr11	-	1381	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-31	2590	-31	-1911	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGGTCTGTGGAGTTAG	NA	False	NA	NA	False	NA	NA	NA	31320105	31309896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.15	chr11	-	1285	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-64	2719	-64	-2040	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCGTGCAGGTGTGTGA	NA	False	NA	0	True	ATTAAA	-39	NA	31320138	31310025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.16	chr11	-	3135	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-88	2736	-88	-2057	intron_retention	FALSE	canonical	3	131	junction_2	15.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCAAATTGTGGAC	NA	False	NA	-17	True	ATTAAA	-22	NA	31320162	31310042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31310529_31315331_31315544_31317725
ES.4545.17	chr11	-	2368	4	NNC	ENSMUSG00000020303.3	novel	544	2	NA	NA	2	2126	intron_retention	FALSE	canonical	3	7	junction_1	66.9676538835479	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTGTTCTAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	31320072	31313314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31314967_31315331_31315544_31317725_31317869_31319711
ES.4545.18	chr11	-	2345	4	NNC	ENSMUSG00000020303.3	novel	544	2	NA	NA	-88	2013	intron_retention	FALSE	canonical	3	7	junction_1	66.9676538835479	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTGTGTGAAATGTTGA	NA	False	NA	NA	False	NA	NA	NA	31320162	31313427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31314967_31315331_31315544_31317725_31317869_31319711
ES.4545.19	chr11	-	1517	5	NNC	ENSMUSG00000020303.3	novel	544	2	NA	NA	11	1363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	72.3774826862609	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTGTTTCTTACTTG	NA	False	NA	NA	False	NA	NA	NA	31320036	31314077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31314967_31315331_31315544_31317725_31317869_31319711_31319916_31319967
ES.4545.2	chr11	-	3188	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	2254	341	346	338	3prime_fragment	FALSE	canonical	3	131	junction_2	15.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGATGATCTGAACACC	NA	False	NA	NA	False	AATAAA	-32	NA	31317820	31307647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31310529_31315331_31315544_31317725
ES.4545.20	chr11	-	3743	1	Genic_Genomic	ENSMUSG00000020303.3	novel	NA	NA	NA	NA	-2	-893	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGCTCACCTCTTCAGA	NA	False	NA	NA	False	AAGAAA	-21	NA	31320076	31316333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_31316300_31320100
ES.4545.3	chr11	-	8453	2	FSM	ENSMUSG00000020303.3	ENSMUST00000149467.2	544	2	-355	-7554	-355	99	multi-exon	FALSE	canonical	3	131	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTGATTAGAAATGT	NA	False	NA	-14	True	AGTAAA	-27	NA	31318521	31307886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31315544_31317725
ES.4545.4	chr11	-	5203	3	ISM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-1	581	-1	98	intron_retention	FALSE	canonical	3	131	junction_2	15.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGTGATTAGAAATG	NA	False	NA	-15	True	AGTAAA	-26	NA	31320075	31307887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31310529_31315331_31315544_31317725
ES.4545.5	chr11	-	3249	4	NIC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-41	98	intron_retention	FALSE	canonical	1	8	junction_2	72.5962962018189	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGTGATTAGAAATG	NA	False	NA	-15	True	AGTAAA	-26	NA	31320115	31307887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_31310529_31315331_31315393_31317725_31317869_31319711
ES.4545.6	chr11	-	3738	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	-379	581	-379	98	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGTGATTAGAAATG	NA	False	NA	-15	True	AGTAAA	-26	NA	31320453	31307887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ES.4545.7	chr11	-	3761	5	NNC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-379	98	intron_retention	FALSE	canonical	0	0	junction_1	72.3774826862609	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGTGATTAGAAATG	NA	False	NA	-15	True	AGTAAA	-26	NA	31320453	31307887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31310529_31314943_31314967_31315331_31315544_31317725_31317869_31319711
ES.4545.8	chr11	-	3776	4	NNC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-1588	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.2107937254348	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCATGGCTCCTTGTGT	NA	False	NA	-26	True	AGTAAA	-15	NA	31321662	31307898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31310529_31315331_31315544_31317725_31317869_31320871
ES.4545.9	chr11	-	3872	4	NIC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-66	86	intron_retention	FALSE	canonical	3	18	junction_3	61.8834029086601	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCATGGCTCCTTGTG	NA	False	NA	-27	True	AGTAAA	-14	NA	31320140	31307899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_31310529_31315331_31315544_31317725_31318328_31319711
ES.4546.1	chr11	+	4309	2	Intergenic	novelGene_3505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGTGTTGTGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	31491538	31499652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_31495793_31499597
ES.4546.2	chr11	+	1846	2	Intergenic	novelGene_3506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACATGGTGTTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	31495804	31499649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_31496002_31498000
ES.4547.1	chr11	-	179	1	Intergenic	novelGene_3507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGAATGTTGCTGCA	NA	False	NA	NA	False	NA	NA	NA	31571861	31571682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31571700_31571900
ES.4548.1	chr11	+	3604	1	Antisense	novelGene_ENSMUSG00000044502.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCCAAACAAAAGCCCTAA	NA	False	NA	NA	False	NA	NA	NA	31615100	31618704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_31615100_31618700
ES.4549.1	chr11	-	3401	3	FSM	ENSMUSG00000044502.17	ENSMUST00000109415.2	799	3	-144	-2458	14	1152	multi-exon	FALSE	canonical	3	591	junction_1	17	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACACATCTCAGAACAT	NA	False	NA	NA	False	AATAAA	-26	NA	31621871	31614028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31616934_31619243_31619369_31621500
ES.4549.10	chr11	-	1295	5	NNC	ENSMUSG00000044502.17	novel	1394	4	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	258.295373555161	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTGTTTGACGATC	NA	False	NA	-35	True	AATAAA	-16	NA	31621852	31615186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500_31621603_31621662
ES.4549.2	chr11	-	1489	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	-66	-29	-66	29	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAACCTTAGAGCCTTG	NA	False	NA	0	True	AATAAA	-30	NA	31621951	31615151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
ES.4549.4	chr11	-	3281	1	NIC	ENSMUSG00000044502.17	novel	1394	4	NA	NA	3266	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	-29	True	AATAAA	-22	NA	31618461	31615180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_31615200_31618500
ES.4549.5	chr11	-	5349	3	NNC	ENSMUSG00000044502.17	novel	1394	4	NA	NA	281	0	intron_retention	TRUE	non_canonical	0	0	junction_2	284	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	-29	True	AATAAA	-22	NA	31621446	31615180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_31615868_31616736_31621169_31621216
ES.4549.6	chr11	-	5818	2	ISM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	12	6	12	-6	intron_retention	FALSE	canonical	3	568	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTGTTTGACGATC	NA	False	NA	-35	True	AATAAA	-16	NA	31621873	31615186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31615868_31616736
ES.4549.9	chr11	-	3506	3	ISM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	14	6	14	-6	intron_retention	FALSE	canonical	3	568	junction_1	11.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTGTTTGACGATC	NA	False	NA	-35	True	AATAAA	-16	NA	31621871	31615186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_31615868_31616736_31616934_31619243
ES.455.1	chr1	-	4135	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-347	-147	159	147	multi-exon	FALSE	canonical	3	220	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTATTAGATATTTC	333	False	NA	-2	True	GATAAA	-20	NA	52992350	52961335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52991773
ES.455.10	chr1	-	5656	1	NIC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	22282	276	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	2318	False	NA	NA	False	TTTAAA	-39	NA	52969721	52964065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_52964100_52969700
ES.455.11	chr1	-	891	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-254	276	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	TTTAAA	-39	NA	52992763	52964065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52992700
ES.455.12	chr1	-	1220	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-374	2795	132	64	multi-exon	FALSE	canonical	3	220	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCAATGTATATCTGCT	306	False	NA	65	True	AATATA	-24	NA	52992377	52964277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52991773
ES.455.13	chr1	-	688	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-272	55	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTTTATCACCAATGT	NA	False	NA	56	True	AATATA	-15	NA	52992781	52964286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52992700
ES.455.14	chr1	-	637	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	66	2862	66	1	multi-exon	FALSE	canonical	3	11	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTCTATGATATTAATG	240	False	NA	-2	True	AATACA	-16	NA	52992443	52964344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52992355
ES.455.2	chr1	-	4031	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-365	-25	141	25	multi-exon	FALSE	canonical	3	220	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATAACTTTTGGTGT	315	False	NA	20	True	AATAAA	-39	NA	52992368	52961457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52991773
ES.455.3	chr1	-	3501	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	69	-5	69	5	multi-exon	FALSE	canonical	3	11	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTCCTCATTTAATTG	243	False	NA	0	True	AATAAA	-19	NA	52992440	52961477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52992355
ES.455.4	chr1	-	3513	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-290	3	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_1	0	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAGTCCTCATTTAAT	NA	False	NA	-2	True	AATAAA	-17	NA	52992799	52961479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52992700
ES.455.5	chr1	-	3715	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	625	False	NA	-5	True	AATAAA	-14	NA	52992058	52961482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52991754
ES.455.6	chr1	-	3478	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	433	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTCAGTCCTCAT	1113	False	NA	-7	True	AATAAA	-12	NA	52991570	52961484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52991501
ES.455.7	chr1	-	3576	3	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	187	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTCAGTCCTCAT	361	False	NA	-7	True	AATAAA	-12	NA	52992322	52961484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52962429_52962810_52964894_52991773
ES.455.8	chr1	-	3531	2	NNC	ENSMUSG00000043629.13	novel	3641	2	NA	NA	617	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTCAGTCCTCAT	1297	False	NA	-7	True	AATAAA	-12	NA	52991386	52961484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_52964894_52991264
ES.455.9	chr1	-	1451	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	-359	2549	147	310	multi-exon	FALSE	canonical	3	220	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGGCCCAGAACATGAA	321	False	NA	NA	False	NA	NA	NA	52992362	52964031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_52964894_52991773
ES.4550.1	chr11	+	7632	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1337	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTACTATACTTATT	NA	False	NA	4	True	AATAAA	-15	NA	31820873	31885635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.2	chr11	+	7052	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1331	-573	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTATTATCTT	NA	False	NA	NA	False	AATAAA	-16	NA	31820879	31885061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.3	chr11	+	7676	9	FSM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	-2395	0	-1331	0	multi-exon	FALSE	canonical	2	5	junction_3	10.3802697460133	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTACTATACTTAT	NA	False	NA	3	True	AATAAA	-14	NA	31820879	31885634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_31823413_31839857_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.4	chr11	+	6712	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1102	-684	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATCCTCTTTCTTGCTGG	NA	False	NA	NA	False	ATTAAA	-25	NA	31821108	31884950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.5	chr11	+	6041	9	FSM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	-1337	577	-273	-577	multi-exon	FALSE	canonical	2	5	junction_3	10.3802697460133	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTTTATTTTATTA	NA	False	NA	NA	False	AATAAA	-12	NA	31821937	31885057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_31823413_31839857_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.6	chr11	+	6900	5	ISM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	49288	-1	49288	1	3prime_fragment	FALSE	canonical	3	21	junction_2	7.29297607290741	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTACTATACTTATT	318	False	NA	4	True	AATAAA	-15	NA	31872562	31885635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ES.4550.7	chr11	+	5298	2	ISM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	55975	2	55975	-2	3prime_fragment	FALSE	canonical	3	37	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCTTTTACTATACTT	4917	False	NA	1	True	AATAAA	-12	NA	31879249	31885632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_31880220_31881304
ES.4551.1	chr11	-	1362	1	Intergenic	novelGene_3508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGGAG	NA	False	NA	NA	False	ATTAAA	-16	NA	31852154	31850792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31850800_31852200
ES.4552.1	chr11	+	2788	5	NNC	ENSMUSG00000020299.7	novel	2000	5	NA	NA	-15	-567	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.24404424085076	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATGTGAATTTC	2269	False	NA	NA	False	AATATA	-18	NA	31915576	31929084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_31915952_31923555_31923642_31925036_31926476_31926785_31926831_31928241
ES.4552.2	chr11	+	1461	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	-2	541	-2	-541	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGAACAGCAGATGT	2282	False	NA	NA	False	AATATA	-44	NA	31915589	31929110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
ES.4552.3	chr11	+	2765	4	NNC	ENSMUSG00000020299.7	novel	2000	5	NA	NA	16	-633	intron_retention	FALSE	canonical	0	0	junction_1	6.37704215656966	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTAAATGTTTTATT	2300	False	NA	NA	False	NA	NA	NA	31915607	31929018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_31915955_31923555_31923642_31925036_31925136_31926785
ES.4552.4	chr11	+	1082	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	46	872	46	-872	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTACTACCAAATGGAA	2330	False	NA	NA	False	AATAAA	-27	NA	31915637	31928779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
ES.4552.5	chr11	+	6011	4	NNC	ENSMUSG00000020299.7	novel	2000	5	NA	NA	4366	-567	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.71547606649408	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATGTGAATTTC	6650	False	NA	NA	False	AATATA	-18	NA	31919957	31929084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_31923642_31925036_31926476_31926785_31926831_31928241
ES.4552.6	chr11	+	2253	4	ISM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	6784	567	6784	-567	3prime_fragment	FALSE	canonical	3	12	junction_3	0.816496580927726	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAATGTGAATTTC	9068	False	NA	NA	False	AATATA	-18	NA	31922375	31929084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_31923642_31925036_31925136_31926785_31926831_31928241
ES.4553.1	chr11	-	5020	1	Antisense	novelGene_ENSMUSG00000020299.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTTGTCTGCAAAATT	NA	False	NA	NA	False	AATAAA	-24	NA	31932613	31927593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_31927600_31932600
ES.4553.10	chr11	-	834	3	Intergenic	novelGene_3517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	7	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTGTCTGTGTCTCG	NA	False	NA	NA	False	NA	NA	NA	31937008	31932041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934463_31934750_31936961
ES.4553.11	chr11	-	2208	2	Intergenic	novelGene_3518	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	31937020	31932600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31934750_31936961
ES.4553.12	chr11	-	4412	1	Intergenic	novelGene_3519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTTGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	31937013	31932601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932600_31937000
ES.4553.13	chr11	-	2839	2	Intergenic	novelGene_3520	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTAGTTGTCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	31937014	31932604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31934750_31936320
ES.4553.14	chr11	-	1611	2	Intergenic	novelGene_3521	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTTTGGGGGCTGTT	NA	False	NA	NA	False	AATACA	-12	NA	31937006	31933183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31934750_31936961
ES.4553.2	chr11	-	4159	2	Intergenic	novelGene_3509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCATGCTTTTGTATC	NA	False	NA	NA	False	NA	NA	NA	31937014	31930643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31934750_31936961
ES.4553.3	chr11	-	2323	3	Intergenic	novelGene_3510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	3	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATTGCATACCATCATT	NA	False	NA	NA	False	NA	NA	NA	31937011	31930694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934324_31934750_31936961
ES.4553.4	chr11	-	2241	3	Intergenic	novelGene_3511	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	13	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATTGCATACCATCATT	NA	False	NA	NA	False	NA	NA	NA	31937013	31930694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934463_31934750_31936906
ES.4553.5	chr11	-	6205	1	Intergenic	novelGene_3512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTGGGATAACTATA	NA	False	NA	NA	False	NA	NA	NA	31937008	31930803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31930800_31937000
ES.4553.6	chr11	-	2693	3	Intergenic	novelGene_3514	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	12	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATATAGTTTGGGATAAC	NA	False	NA	NA	False	NA	NA	NA	31936992	31930807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934463_31934750_31936320
ES.4553.7	chr11	-	4592	2	Intergenic	novelGene_3513	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATATAGTTTGGGATAAC	NA	False	NA	NA	False	NA	NA	NA	31936970	31930807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31934750_31936320
ES.4553.8	chr11	-	2066	3	Intergenic	novelGene_3515	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	7	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTCATATAGTTT	NA	False	NA	NA	False	NA	NA	NA	31937014	31930815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934463_31934750_31936961
ES.4553.9	chr11	-	1985	3	Intergenic	novelGene_3516	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	13	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATTGGTTATTAAATGT	NA	False	NA	NA	False	NA	NA	NA	31937011	31930948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_31932543_31934463_31934750_31936906
ES.4554.1	chr11	+	1028	1	Genic_Genomic	ENSMUSG00000020297.11	novel	NA	NA	NA	NA	57677	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTCTGTCCATCTGT	6331	False	NA	25	True	AATAAA	-21	NA	32008178	32009206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_32008200_32009200
ES.4555.1	chr11	-	135	1	Intergenic	novelGene_3522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAACCAA	NA	False	NA	NA	False	NA	NA	NA	32072036	32071901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32071900_32072000
ES.4556.1	chr11	-	4189	6	NNC	ENSMUSG00000020279.11	novel	2798	7	NA	NA	5859	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCATTAAGAACTGTTC	NA	False	NA	NA	False	AATAAA	-10	NA	32144363	32137554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32141047_32141764_32141850_32142646_32142753_32143173_32143382_32143678_32143880_32144266
ES.4557.1	chr11	+	816	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	179.342375081853	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155412	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32155664_32156959_32157044_32157556_32157663_32158333_32158409_32158684
ES.4557.2	chr11	+	815	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	6	0	6	0	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155420	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ES.4557.3	chr11	+	2097	4	NIC	ENSMUSG00000040767.11	novel	770	4	NA	NA	13	0	intron_retention	FALSE	canonical	2	5	junction_1	195.77708412035	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155427	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32157044_32157556_32157663_32158333_32158409_32158684
ES.4557.4	chr11	+	788	5	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	178.047044345027	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155430	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32155664_32156959_32157051_32157573_32157663_32158333_32158409_32158684
ES.4557.5	chr11	+	1467	4	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	-13	0	intron_retention	FALSE	canonical	2	5	junction_2	199.135353186944	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155432	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32155664_32156959_32157044_32157556_32158409_32158684
ES.4557.6	chr11	+	1046	4	ISM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	50	1	7	-1	intron_retention	FALSE	canonical	3	400	junction_3	16.8720676464584	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATCAGAAAGCCATAG	NA	False	NA	20	True	AATAAA	-21	NA	32155464	32158983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333
ES.4557.7	chr11	+	1277	4	NIC	ENSMUSG00000040767.11	novel	821	5	NA	NA	7	0	intron_retention	FALSE	canonical	3	400	junction_2	15.5777619273972	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155464	32158984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32155664_32156959_32157663_32158333_32158409_32158684
ES.4557.8	chr11	+	1401	4	NNC	ENSMUSG00000040767.11	novel	770	4	NA	NA	-625	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	205.306816469617	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATCAGAAAGCCATAG	NA	False	NA	20	True	AATAAA	-21	NA	32156136	32158983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32157044_32157556_32157663_32158319_32158409_32158684
ES.4558.1	chr11	-	2982	17	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_2	19.6666556320591	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTCACTGTTTCCTG	NA	False	NA	1	True	AATAAA	-38	NA	32172261	32159581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.10	chr11	-	3067	16	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_2	25.4319134597109	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172264	32159584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164484_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.11	chr11	-	3866	15	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_2	20.8375641962455	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172270	32159584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164603_32164909_32166065_32166141_32166283_32172168
ES.4558.12	chr11	-	3412	14	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_2	28.0124655261202	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172305	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163259_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.13	chr11	-	3812	14	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-51	0	intron_retention	FALSE	canonical	3	48	junction_8	11.9004748550278	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172351	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.14	chr11	-	3889	17	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.1685972648393	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32167362	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164106_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141
ES.4558.15	chr11	-	3925	13	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	7	0	intron_retention	FALSE	canonical	3	53	junction_7	10.6258986548067	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172293	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164305_32164392_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.16	chr11	-	2822	17	NIC	ENSMUSG00000020282.19	novel	2805	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	4	junction_13	20.9758045137725	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172274	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160707_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164484_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.18	chr11	-	5023	14	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-563	0	intron_retention	FALSE	canonical	3	53	junction_8	10.4705843244145	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32167880	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141
ES.4558.19	chr11	-	4054	15	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	26.2289760317377	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172242	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160658_32160759_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32166065_32166141_32166283_32172168
ES.4558.2	chr11	-	2957	17	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	5	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	25.3152004732335	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTCACTGTTTCCT	NA	False	NA	0	True	AATAAA	-37	NA	32172275	32159582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162942_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.20	chr11	-	2903	18	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.5550014637714	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172265	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160896_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.21	chr11	-	3183	14	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_8	28.6395679449081	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172270	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160707_32160759_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163259_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.22	chr11	-	2970	19	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	27.4168214562781	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172220	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165575_32165681_32165933_32166065_32166141_32166283_32172168
ES.4558.23	chr11	-	3196	15	NNC	ENSMUSG00000020282.19	novel	2805	18	NA	NA	8	0	intron_retention	FALSE	canonical	2	4	junction_11	22.1374417340986	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172292	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160220_32160397_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164484_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.24	chr11	-	4423	10	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-9	0	intron_retention	FALSE	canonical	3	65	junction_3	10.1153837126587	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172309	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32161646_32161919_32162021_32162622_32162785_32162867_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.25	chr11	-	3549	15	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_2	21.2584917006771	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGATTTGTCACTGTTT	NA	False	NA	-3	True	AATAAA	-34	NA	32172265	32159585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.26	chr11	-	4178	16	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_2	20.603559563014	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTTGTCACTGTT	NA	False	NA	-4	True	AATAAA	-33	NA	32172290	32159586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32166065_32166141_32166283_32172168
ES.4558.28	chr11	-	3644	15	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	21.2508103086802	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTTGTCACTGTT	NA	False	NA	-4	True	AATAAA	-33	NA	32172275	32159586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32161206_32161581_32161646_32161919_32162021_32162622_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.29	chr11	-	3352	17	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_2	20.1392612513468	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGATTTGTCACTGTT	NA	False	NA	-4	True	AATAAA	-33	NA	32172274	32159586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.3	chr11	-	3659	14	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	0	2	intron_retention	TRUE	canonical	1	3	junction_2	25.9336887661156	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTCACTGTTTCCT	NA	False	NA	0	True	AATAAA	-37	NA	32172244	32159582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160759_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164106_32164181_32164305_32164392_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.30	chr11	-	3426	15	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_2	29.6855114801267	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGAGGATTTGTCACTGT	NA	False	NA	-5	True	AATAAA	-32	NA	32172292	32159587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160220_32160397_32160552_32160657_32160759_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166348_32172168
ES.4558.31	chr11	-	4740	13	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_2	22.6801430526549	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGGATTTGTCACTG	NA	False	NA	-6	True	AATAAA	-31	NA	32172271	32159588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160657_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164110_32164181_32164305_32164392_32166065_32166141_32166283_32172168
ES.4558.32	chr11	-	3714	13	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	4	-2	intron_retention	FALSE	canonical	3	63	junction_2	9.33147302888932	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGGATTTGTCACTG	NA	False	NA	-6	True	AATAAA	-31	NA	32172255	32159588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.33	chr11	-	3586	15	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_2	25.5767153353776	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCGATGAGGATTTGTC	NA	False	NA	-10	True	AATAAA	-27	NA	32172242	32159592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32164106_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.4	chr11	-	2920	16	NNC	ENSMUSG00000020282.19	novel	2805	18	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_2	29.6180125374183	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGTCACTGTTTCCT	NA	False	NA	0	True	AATAAA	-37	NA	32172285	32159582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162942_32163164_32163259_32163518_32163951_32164305_32164392_32164484_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.6	chr11	-	2968	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	-21	-1	-21	1	multi-exon	FALSE	canonical	0	0	junction_2	19.5534933028863	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGATTTGTCACTGTTTCC	NA	False	NA	-1	True	AATAAA	-36	NA	32172321	32159583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.7	chr11	-	2871	18	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	14.534054985628	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172275	32159584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32160224_32160397_32160552_32160707_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.8	chr11	-	2947	17	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	23.3449004067269	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172280	32159584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160173_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4558.9	chr11	-	2875	18	NNC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.8424795245429	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172280	32159584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162673_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ES.4559.1	chr11	+	2147	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-46	2	intron_retention	FALSE	canonical	3	350	junction_1	6	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176458	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32177950_32179848_32180054_32181573
ES.4559.10	chr11	+	1730	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	4	3	4	-3	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTGATGGCACGCGTG	NA	False	NA	3	True	NA	NA	NA	32176514	32182697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ES.4559.11	chr11	+	1425	5	NIC	ENSMUSG00000020287.16	novel	1404	5	NA	NA	6	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	172.556331381958	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176516	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32176718_32177751_32177950_32179246_32179617_32179848_32180054_32181573
ES.4559.12	chr11	+	5519	1	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	9	16	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGTGTTCATGCAGT	NA	False	NA	41	True	AATAAA	-38	NA	32176519	32182038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32176500_32182000
ES.4559.13	chr11	+	3606	2	NIC	ENSMUSG00000020287.16	novel	2143	4	NA	NA	9	2	intron_retention	FALSE	canonical	3	350	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176519	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32177950_32179848
ES.4559.14	chr11	+	4750	1	NIC	ENSMUSG00000020287.16	novel	1404	5	NA	NA	-8	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAGGGAAGCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	32176521	32181271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32176500_32181300
ES.4559.15	chr11	+	1801	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.891499354659	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCCCAAGTCTCAGCC	NA	False	NA	21	True	AATAAA	-18	NA	32176528	32182018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32177482_32177751_32177950_32179848_32180054_32181573
ES.4559.16	chr11	+	3719	1	Genic_Genomic	ENSMUSG00000020287.16	novel	NA	NA	NA	NA	5404	2961	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGCATTAGACAGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	32181942	32185661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_32181900_32185700
ES.4559.2	chr11	+	1113	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-38	662	-32	16	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGTGTTCATGCAGT	NA	False	NA	41	True	AATAAA	-38	NA	32176472	32182038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ES.4559.3	chr11	+	1498	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-22	261	-16	-261	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCACATCCT	NA	False	NA	NA	False	NA	NA	NA	32176488	32182439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ES.4559.4	chr11	+	4008	2	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	-15	-5	intron_retention	FALSE	canonical	3	362	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCCCCAAGTCTCAGC	NA	False	NA	20	True	AATAAA	-17	NA	32176489	32182017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32180054_32181573
ES.4559.5	chr11	+	2576	3	ISM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	1	680	1	-2	intron_retention	FALSE	canonical	3	333	junction_1	8.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCCAAGTCTCAGCCAG	NA	False	NA	23	True	AATAAA	-20	NA	32176511	32182020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32176718_32177751_32177950_32179848
ES.4559.6	chr11	+	1037	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	161.765948895997	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176513	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32176697_32177751_32177950_32179848_32180054_32181573
ES.4559.7	chr11	+	4174	3	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	3	-263	intron_retention	FALSE	non_canonical	0	0	junction_2	181	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCACATC	NA	False	NA	NA	False	NA	NA	NA	32176513	32182437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32180054_32181573_32181844_32182073
ES.4559.8	chr11	+	1037	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	164.240338799239	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176514	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32176718_32177751_32177950_32179868_32180054_32181573
ES.4559.9	chr11	+	2956	3	NIC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	4	2	intron_retention	FALSE	canonical	3	333	junction_1	14.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTCTCAGCCAGAATT	NA	False	NA	27	True	AATAAA	-24	NA	32176514	32182024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32176718_32177751_32180054_32181573
ES.456.1	chr1	+	178	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	53206450	53206628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_53206400_53206600
ES.4560.1	chr11	-	2823	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	46	-4	-3	4	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGAGGCTGATCCAT	4613	False	NA	NA	False	ATTAAA	-19	NA	32217661	32181958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.10	chr11	-	2226	14	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	2	265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	61.5152840968388	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4618	False	NA	-4	True	AATATA	-14	NA	32217656	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32200443_32200563_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.11	chr11	-	2123	14	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-4	265	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	61.5977598916441	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4641	False	NA	-4	True	AATATA	-14	NA	32217633	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32209216_32209256_32213024_32213095_32217422
ES.4560.12	chr11	-	2847	13	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-13	265	intron_retention	FALSE	canonical	0	0	junction_8	63.5430737549123	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4632	False	NA	-4	True	AATATA	-14	NA	32217642	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32200443_32200563_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.13	chr11	-	1955	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-5	265	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	48.4529250965638	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4640	False	NA	-4	True	AATATA	-14	NA	32217634	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184097_32184731_32184922_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.14	chr11	-	5536	11	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-8	265	intron_retention	FALSE	canonical	0	0	junction_4	69.6709408577206	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4637	False	NA	-4	True	AATATA	-14	NA	32217637	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32183117_32183903_32184922_32186787_32189954_32191797_32191936_32194707_32194749_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.15	chr11	-	1983	13	NIC	ENSMUSG00000020289.16	novel	2945	14	NA	NA	1	265	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	46.5206047538794	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4660	False	NA	-4	True	AATATA	-14	NA	32217614	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217504
ES.4560.16	chr11	-	4435	10	NIC	ENSMUSG00000020289.16	novel	3417	12	NA	NA	2	265	intron_retention	FALSE	canonical	2	3	junction_8	53.6762126315665	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	4661	False	NA	-4	True	AATATA	-14	NA	32217613	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32213024_32213095_32217422
ES.4560.17	chr11	-	1740	10	NNC	ENSMUSG00000020289.16	novel	1602	11	NA	NA	-278	265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.3424564822241	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTGTGTATGTGT	5133	False	NA	-4	True	AATATA	-14	NA	32200556	32182669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32183117_32183903_32184097_32184702_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32200443
ES.4560.18	chr11	-	2568	11	NIC	ENSMUSG00000020289.16	novel	3417	12	NA	NA	2	264	intron_retention	FALSE	canonical	2	3	junction_9	51.225091507971	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTGTGTATGTG	4661	False	NA	-5	True	AATATA	-13	NA	32217613	32182670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32213024_32213095_32217422
ES.4560.19	chr11	-	7358	9	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-6	264	intron_retention	FALSE	canonical	3	148	junction_2	13.4327026320097	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTGTGTATGTG	4639	False	NA	-5	True	AATATA	-13	NA	32217635	32182670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.2	chr11	-	4222	11	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	148	junction_4	12.6712272491657	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTTGCTGAGGCTGA	4631	False	NA	NA	False	ATTAAA	-14	NA	32217643	32181963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.20	chr11	-	3101	11	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-5	264	intron_retention	FALSE	canonical	3	148	junction_4	12.6948808580467	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTTTGTGTGTATGTG	4640	False	NA	-5	True	AATATA	-13	NA	32217634	32182670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.21	chr11	-	3019	11	NIC	ENSMUSG00000020289.16	novel	2945	14	NA	NA	-6	263	intron_retention	FALSE	canonical	2	2	junction_10	50.5174227371112	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGTTTTGTGTGTATGT	4639	False	NA	-6	True	AATATA	-12	NA	32217635	32182671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217504
ES.4560.24	chr11	-	1531	11	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	73	2683	-5	-1695	5prime_fragment	FALSE	canonical	3	148	junction_4	12.6712272491657	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGAGGTGTTTTTACAT	4640	False	NA	NA	False	GGGGCT	-45	NA	32217634	32184645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.3	chr11	-	3345	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-13	1	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAAATTCTGGCTGA	4632	False	NA	NA	False	GATAAA	-13	NA	32217642	32182052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.4	chr11	-	3000	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-5	-365	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTATACTGTTGCTG	4611	False	NA	NA	False	NA	NA	NA	32217663	32182418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.5	chr11	-	2118	13	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-4	270	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.4665351504595	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTATGTGTGCCCT	4641	False	NA	1	True	AATATA	-19	NA	32217633	32182664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_32183117_32183903_32184097_32184702_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.6	chr11	-	2745	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	2	268	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTATGTGTGCC	4618	False	NA	-1	True	AATATA	-17	NA	32217656	32182666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.7	chr11	-	2110	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	50	705	1	267	multi-exon	FALSE	canonical	3	148	junction_6	11.6770786871831	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTGTGTATGTGTGC	4617	False	NA	-2	True	AATATA	-16	NA	32217657	32182667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4560.8	chr11	-	5601	12	NIC	ENSMUSG00000020289.16	novel	2945	14	NA	NA	-6	266	intron_retention	FALSE	canonical	2	2	junction_11	48.2933528954482	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4639	False	NA	-3	True	AATATA	-15	NA	32217635	32182668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32203950_32205438_32205569_32213024_32213095_32217504
ES.4560.9	chr11	-	4970	10	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	-6	266	intron_retention	FALSE	canonical	3	148	junction_3	13.3813948598441	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4639	False	NA	-3	True	AATATA	-15	NA	32217635	32182668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_32183117_32183903_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ES.4561.1	chr11	-	207	1	Intergenic	novelGene_3523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGAGCTGTGAGAATT	1080	False	NA	NA	False	AATATA	-4	NA	32236158	32235951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32236000_32236200
ES.4562.1	chr11	-	210	1	Intergenic	novelGene_3524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATCAGAGCTGTGAGAAT	NA	False	NA	NA	False	AATATA	-3	NA	32249185	32248975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32249000_32249200
ES.4563.1	chr11	+	6911	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-32	534	-32	-534	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCCGGATTATGCCTG	239	False	NA	NA	False	AATAAA	-18	NA	32297787	32377639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.2	chr11	+	3296	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-28	4145	-28	-4145	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCAGCCTCCGGGGTTTC	243	False	NA	NA	False	NA	NA	NA	32297791	32374028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.3	chr11	+	3542	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-27	3898	-27	-3898	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCCATGAGTGCTTCT	244	False	NA	NA	False	NA	NA	NA	32297792	32374275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.4	chr11	+	7298	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	-9	124	-9	-124	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTAGTGTTTGTGGATTT	262	False	NA	19	True	AATAAA	-32	NA	32297810	32378049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.5	chr11	+	4750	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	32	2631	12	-2631	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTGTTGCTGTTTTG	303	False	NA	NA	False	NA	NA	NA	32297851	32375542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.6	chr11	+	5428	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	33	1952	13	-1952	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAAGGTATGGAGAGT	304	False	NA	NA	False	AATACA	-8	NA	32297852	32376221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4563.7	chr11	+	3939	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	33	3441	13	-3441	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGCTTGGTCTGTGCC	304	False	NA	NA	False	AATAAA	-36	NA	32297852	32374732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ES.4564.1	chr11	+	3361	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	-321	-2028	-321	2028	multi-exon	FALSE	canonical	3	148	junction_1	5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGCCATTATTTCTCT	4160	False	NA	19	True	TTTAAA	-25	NA	32405048	32468715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32405547_32449224_32449462_32466089
ES.4564.2	chr11	+	3071	2	NIC	ENSMUSG00000044949.5	novel	1012	3	NA	NA	-276	2020	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTGTCTTTGCCATT	4205	False	NA	11	True	TTTAAA	-17	NA	32405093	32468707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32405547_32466089
ES.4564.3	chr11	+	4807	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	15	-3810	15	3810	multi-exon	FALSE	canonical	3	148	junction_1	5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTGGTTATTTTCTT	4496	False	NA	NA	False	NA	NA	NA	32405384	32470497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32405547_32449224_32449462_32466089
ES.4564.4	chr11	+	175	1	Intergenic	novelGene_3526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTAAAAACAACAACAACT	NA	False	NA	NA	False	NA	NA	NA	32470074	32470249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_32470100_32470200
ES.4565.1	chr11	-	177	1	Intergenic	novelGene_3525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTATAATCCCAG	1923	False	NA	NA	False	NA	NA	NA	32408006	32407829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32407800_32408000
ES.4566.1	chr11	-	2242	1	Antisense	novelGene_ENSMUSG00000044949.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGCATGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	32467236	32464994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_32465000_32467200
ES.4567.1	chr11	-	2137	1	Genic_Genomic	ENSMUSG00000044056.4	novel	NA	NA	NA	NA	-1034	-7639	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTGTGAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-37	NA	32483115	32480978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_32481000_32483100
ES.4568.1	chr11	+	717	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	-97	-38774	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCTGTGCACTAGTG	NA	False	NA	NA	False	NA	NA	NA	32483207	32509754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32483560_32505123_32505289_32509554
ES.4568.10	chr11	+	2453	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26173	6	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTGTTGTTCTTTCTG	1698	False	NA	7	True	AATAAA	-18	NA	32564767	32574593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
ES.4568.11	chr11	+	724	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26182	-1714	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTATTGTGATCCTTG	1707	False	NA	NA	False	NA	NA	NA	32564776	32572873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
ES.4568.12	chr11	+	2479	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26221	6	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	27.0102861065105	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTGTTGTTCTTTCTG	1746	False	NA	7	True	AATAAA	-18	NA	32564815	32574593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32564885_32565780_32565907_32567848_32567963_32572423
ES.4568.13	chr11	+	2411	3	ISM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	82475	-6	27185	6	3prime_fragment	FALSE	canonical	3	65	junction_2	7	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTGTTGTTCTTTCTG	2710	False	NA	7	True	AATAAA	-18	NA	32565779	32574593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32565907_32567848_32567963_32572423
ES.4568.2	chr11	+	5118	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	-84	-8	-84	8	multi-exon	TRUE	canonical	3	12	junction_8	17.3190824607989	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTTGTTCTTTCTGGT	NA	False	NA	9	True	AATAAA	-20	NA	32483220	32574595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ES.4568.4	chr11	+	3303	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	11	1712	11	-1712	multi-exon	FALSE	canonical	3	12	junction_8	17.3190824607989	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGTGATCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	32483315	32572875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ES.4568.5	chr11	+	3056	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	24	1946	24	-1946	multi-exon	FALSE	canonical	3	12	junction_8	17.3190824607989	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGCTTCTGTGCCAG	NA	False	NA	NA	False	NA	NA	NA	32483328	32572641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ES.4568.6	chr11	+	177	1	Intergenic	novelGene_3527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	32547256	32547433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_32547300_32547400
ES.4568.7	chr11	+	161	1	Intergenic	novelGene_3528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATGAAAAATAATT	NA	False	NA	NA	False	NA	NA	NA	32552633	32552794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_32552600_32552800
ES.4568.8	chr11	+	1609	8	ISM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	70615	1713	15325	-1713	3prime_fragment	FALSE	canonical	3	14	junction_3	24.8292125513148	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTATTGTGATCCTTGT	NA	False	NA	NA	False	NA	NA	NA	32553919	32572874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ES.4568.9	chr11	+	131	1	Intergenic	novelGene_3530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	2992	False	NA	NA	False	NA	NA	NA	32557964	32558095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_32558000_32558100
ES.4569.1	chr11	-	1090	1	Intergenic	novelGene_3529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32558781	32557691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32557700_32558800
ES.457.1	chr1	+	8763	4	NNC	ENSMUSG00000100763.2	novel	535	3	NA	NA	809	17653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGATCTTTAAAGAGGA	NA	False	NA	NA	False	AAAAAG	-7	NA	53236080	53254507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_53236462_53245720_53246568_53246729_53246879_53247121
ES.4570.1	chr11	-	179	1	Intergenic	novelGene_3531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32579543	32579364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32579400_32579500
ES.4571.1	chr11	+	219	1	Intergenic	novelGene_3532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTGTAATTA	NA	False	NA	NA	False	ATTAAA	-33	NA	32583914	32584133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_32583900_32584100
ES.4572.1	chr11	+	4306	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-325	3	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTCACATTTCTCAG	NA	False	NA	7	True	AATAAA	-18	NA	32592398	32696792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.10	chr11	+	6102	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	7	95	intron_retention	FALSE	canonical	3	196	junction_1	97.1250365625297	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCTAAGTAATGTCAA	NA	False	NA	-14	True	AATAAA	-26	NA	32592730	32696664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32692645_32694529
ES.4572.11	chr11	+	3469	2	NIC	ENSMUSG00000020271.18	novel	620	5	NA	NA	9	-5537	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTAGTCTTGACTTT	NA	False	NA	NA	False	AAAACA	-30	NA	32592732	32665037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771
ES.4572.12	chr11	+	4123	13	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	10	-2	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTCTGTCACATTT	NA	False	NA	2	True	AATAAA	-13	NA	32592733	32696787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.13	chr11	+	4148	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	10	-79	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	175.708169834944	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592733	32696710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.15	chr11	+	4060	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	-141	100	10	-73	multi-exon	FALSE	canonical	3	19	junction_2	161.467713445156	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTCCTGGCGATTG	NA	False	NA	38	True	AATAAA	-29	NA	32592733	32696716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.16	chr11	+	4081	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	10	-107	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCAAGATGAGTATT	NA	False	NA	4	True	AATAAA	-44	NA	32592733	32696682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.17	chr11	+	6933	12	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	10	-72	intron_retention	FALSE	canonical	3	196	junction_1	94.9492252306507	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592733	32696717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.2	chr11	+	4347	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	-291	-235	-291	-12	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGAAAAGCAGTTTT	NA	False	NA	19	True	AATAAA	-30	NA	32592432	32696804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.20	chr11	+	829	2	ISM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	-130	65960	12	27925	5prime_fragment	FALSE	canonical	3	30	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	32592735	32630829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32592936_32630200
ES.4572.21	chr11	+	3993	13	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.285074308018	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTGTCACATTTC	NA	False	NA	3	True	AATAAA	-14	NA	32592735	32696788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32658187_32658251_32661806_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.24	chr11	+	3699	10	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	13	12	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	153.714341443575	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCTCAGAAAAGCAGT	NA	False	NA	16	True	AATAAA	-27	NA	32592736	32696801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.25	chr11	+	4718	12	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	14	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	146.03492166981	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTGTCACATTTCTC	NA	False	NA	5	True	AATAAA	-16	NA	32592737	32696790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672899_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.26	chr11	+	3747	11	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	19	99	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	149.893829092461	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAGTAATGTCAATAAA	NA	False	NA	-10	True	AATAAA	-30	NA	32592742	32696668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.3	chr11	+	4288	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	-350	0	-208	0	multi-exon	FALSE	canonical	3	26	junction_2	161.315167710086	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGTCACATTTCT	NA	False	NA	4	True	AATAAA	-15	NA	32592515	32696789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.30	chr11	+	4573	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	21	98	intron_retention	FALSE	canonical	3	196	junction_1	97.5041427388584	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTAAGTAATGTCAATAA	NA	False	NA	-11	True	AATAAA	-29	NA	32592744	32696667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.32	chr11	+	4067	14	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	23	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.709587644073	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTTCCTGGCGATTG	NA	False	NA	38	True	AATAAA	-29	NA	32592746	32696716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661806_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.34	chr11	+	3930	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	-119	127	23	93	multi-exon	FALSE	canonical	3	26	junction_2	161.315167710086	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCTAAGTAATGTC	NA	False	NA	-16	True	AATAAA	-24	NA	32592746	32696662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.35	chr11	+	3772	13	NNC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	25	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	147.230238251371	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTCCAATAAATTGCT	NA	False	NA	-26	True	AATAAA	-14	NA	32592748	32696652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692565_32692645_32694529
ES.4572.36	chr11	+	3841	13	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	26	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	175.574513304814	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGTTAAATTGTACAGA	NA	False	NA	NA	False	AATAAA	-22	NA	32592749	32696577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.37	chr11	+	3952	13	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	28	93	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	174.071505103187	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATTGCTAAGTAATGTC	NA	False	NA	-16	True	AATAAA	-24	NA	32592751	32696662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.38	chr11	+	3953	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	28	3	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAACTGTTAAATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	32592751	32696572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.39	chr11	+	5819	12	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	28	-141	28	-79	intron_retention	FALSE	canonical	3	196	junction_1	97.5092282134202	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592751	32696710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458
ES.4572.4	chr11	+	3827	11	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-176	-101	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	137.921136886266	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGAGTATTATGCAG	NA	False	NA	10	True	AATAAA	-22	NA	32592547	32696688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.40	chr11	+	3844	12	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	29	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	144.588958576195	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGAGTATTATGCAG	NA	False	NA	10	True	AATAAA	-22	NA	32592752	32696688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685392_32688369_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.41	chr11	+	4688	13	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-29	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	146.827634206462	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTTCCTGGCGAT	NA	False	NA	36	True	AATAAA	-27	NA	32592754	32696714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672899_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.43	chr11	+	3916	13	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-28	-80	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	179.624202619432	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGACCTGGCTTCCTG	NA	False	NA	31	True	AATAAA	-43	NA	32592755	32696709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692565_32692645_32694529
ES.4572.45	chr11	+	4194	15	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-26	-72	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	173.556333852753	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592757	32696717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.46	chr11	+	3979	13	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-26	98	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTAAGTAATGTCAATAA	NA	False	NA	-11	True	AATAAA	-29	NA	32592757	32696667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.47	chr11	+	5624	13	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-25	-3	intron_retention	FALSE	canonical	3	19	junction_2	166.296150653652	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGTTCTGTCACATT	NA	False	NA	1	True	AATAAA	-12	NA	32592758	32696786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.48	chr11	+	3254	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-25	-469	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTTGTTTCTGAGA	NA	False	NA	NA	False	AATAAA	-15	NA	32592758	32696100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.5	chr11	+	4370	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-171	1	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTGTCACATTTCTC	NA	False	NA	5	True	AATAAA	-16	NA	32592552	32696790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.53	chr11	+	3846	11	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	149.893829092461	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTGTCACATTTC	NA	False	NA	3	True	AATAAA	-14	NA	32592763	32696788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.54	chr11	+	3414	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	-111	716	-20	-469	multi-exon	FALSE	canonical	3	19	junction_2	161.467713445156	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTTTGTTTCTGAGA	NA	False	NA	NA	False	AATAAA	-15	NA	32592763	32696100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.55	chr11	+	3781	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	40	0	-20	0	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATTGAAACTGTTAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	32592763	32696569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.56	chr11	+	3389	13	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-19	-81	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	141.048651968823	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTGACCTGGCTTCCT	NA	False	NA	30	True	AATAAA	-42	NA	32592764	32696708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529_32695246_32695712
ES.4572.57	chr11	+	3943	13	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	-19	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.666745283001	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGACCTGGCTTCCTGG	NA	False	NA	32	True	AATAAA	-44	NA	32592764	32696710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32672813_32672899_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.6	chr11	+	4769	16	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-163	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	197.38316938269	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTGCTAAGTAATGT	NA	False	NA	-17	True	AATAAA	-23	NA	32592560	32696661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32663920_32664209_32664689_32664938_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.61	chr11	+	4084	14	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	-11	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	180.2395184849	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACCTGGCTTCCTGGC	NA	False	NA	33	True	AATAAA	-45	NA	32592772	32696711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32602747_32602905_32625601_32625678_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.63	chr11	+	3680	12	NNC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	3	92	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	146.341952092176	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTGCTAAGTAATGT	NA	False	NA	-17	True	AATAAA	-23	NA	32592786	32696661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692565_32692645_32694529
ES.4572.64	chr11	+	4129	14	NNC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	196.240192156835	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTCTGTCACATTT	NA	False	NA	2	True	AATAAA	-13	NA	32592812	32696787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32672813_32672899_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.65	chr11	+	1534	1	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	36394	27927	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	NA	NA	NA	32629297	32630831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32629300_32630800
ES.4572.66	chr11	+	3688	11	ISM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	68903	81	68865	-81	3prime_fragment	FALSE	canonical	3	415	junction_10	23.511699215497	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCTGACCTGGCTTCCT	NA	False	NA	30	True	AATAAA	-42	NA	32661768	32696708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.68	chr11	+	4171	8	ISM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	87486	75	87448	-75	3prime_fragment	FALSE	canonical	3	415	junction_7	23.7228900053109	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGGCTTCCTGGCGAT	5862	False	NA	36	True	AATAAA	-27	NA	32680351	32696714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.7	chr11	+	4084	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	-129	-134	-129	-86	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTACACCTGACCTGGC	NA	False	NA	25	True	AATAAA	-37	NA	32592594	32696703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.8	chr11	+	3898	12	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-21	-101	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGAGTATTATGCAG	NA	False	NA	10	True	AATAAA	-22	NA	32592702	32696688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4572.9	chr11	+	3867	12	NNC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	-4	-101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	147.147477604236	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGATGAGTATTATGCAG	NA	False	NA	10	True	AATAAA	-22	NA	32592719	32696688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688467_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ES.4573.1	chr11	-	4862	1	Intergenic	novelGene_3533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTCCCTAATACCTAC	NA	False	NA	NA	False	NA	NA	NA	32592467	32587605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32587600_32592500
ES.4574.1	chr11	-	1344	1	Intergenic	novelGene_3534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32595950	32594606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32594600_32596000
ES.4575.1	chr11	-	208	1	Intergenic	novelGene_3535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAAAGATTC	1338	False	NA	NA	False	NA	NA	NA	32613367	32613159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32613200_32613400
ES.4576.1	chr11	-	876	1	Intergenic	novelGene_3536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGCTTGGATGTCCAAG	NA	False	NA	NA	False	NA	NA	NA	32860134	32859258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32859300_32860100
ES.4577.1	chr11	-	2775	1	Intergenic	novelGene_3537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCATGAAAGCTGTAGG	NA	False	NA	NA	False	AATAAA	-17	NA	32958614	32955839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_32955800_32958600
ES.4578.1	chr11	+	1948	2	NNC	ENSMUSG00000087318.2	novel	656	4	NA	NA	-1863	-11826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATCCATAAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	33016687	33018695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_33016937_33016996
ES.4578.2	chr11	+	1580	1	Genic_Genomic	ENSMUSG00000087318.2	novel	NA	NA	NA	NA	-1	-10392	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33018549	33020129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_33018500_33020100
ES.4579.1	chr11	+	175	1	Intergenic	novelGene_3538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATCTCCGAT	NA	False	NA	NA	False	NA	NA	NA	33022860	33023035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33022900_33023000
ES.458.1	chr1	-	905	9	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	2	266	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	14.6452850774575	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTGGTTTAAGCACAG	NA	False	NA	NA	False	AATAAA	-18	NA	53226765	53197469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53197948_53202384_53202428_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ES.458.10	chr1	-	3081	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_12	45.7446870017589	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6092	False	NA	NA	False	AATAAA	-18	NA	53336137	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335977
ES.458.11	chr1	-	2888	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	48.1835334171539	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	AATAAA	-18	NA	53336172	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.12	chr1	-	3087	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	-33	0	-33	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6019	False	NA	NA	False	AATAAA	-18	NA	53336210	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.13	chr1	-	3203	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	39.2778563569857	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	AATAAA	-18	NA	53336172	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
ES.458.14	chr1	-	3096	14	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	59.2912777843569	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6089	False	NA	NA	False	AATAAA	-18	NA	53336140	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53330915_53330995_53336044
ES.458.15	chr1	-	3088	13	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	42.22426895624	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6062	False	NA	NA	False	AATAAA	-18	NA	53336167	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255345_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.16	chr1	-	3041	13	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.7911286701039	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	AATAAA	-18	NA	53336172	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321244_53336044
ES.458.17	chr1	-	3117	14	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.4666631287534	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6037	False	NA	NA	False	AATAAA	-18	NA	53336192	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335317_53335431_53336109
ES.458.18	chr1	-	3245	14	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	59.2912777843569	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6094	False	NA	NA	False	AATAAA	-18	NA	53336135	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53330915_53330995_53335890
ES.458.19	chr1	-	2998	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	58.7770686718289	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6098	False	NA	NA	False	AATAAA	-18	NA	53336131	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53306986_53307090_53314228_53314412_53321099_53321252_53335890
ES.458.2	chr1	-	797	7	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	1	184	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.3168032782055	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGGTGCCCTTGGTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	53226766	53197551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53197948_53209507_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ES.458.20	chr1	-	3492	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	67.2728604646929	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	AATAAA	-18	NA	53336172	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53334229_53334406_53335317_53335431_53335890
ES.458.21	chr1	-	3259	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	78.2310810408263	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTTTTCACGTCCA	6056	False	NA	NA	False	AATAAA	-15	NA	53336173	53228348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255345_53255507_53295787_53295952_53313783_53313931_53314228_53314412_53321099_53321252_53329537_53329583_53330915_53330995_53336044
ES.458.23	chr1	-	2928	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	48.0932290212037	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6057	False	NA	NA	False	AATAAA	-14	NA	53336172	53228349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.24	chr1	-	3206	13	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	53.4282358766307	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6094	False	NA	NA	False	AATAAA	-14	NA	53336135	53228349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255345_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
ES.458.25	chr1	-	3761	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	19	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	72.4801521037283	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6074	False	NA	NA	False	AATAAA	-14	NA	53336155	53228349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255503_53295787_53295952_53303784_53304045_53304110_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.26	chr1	-	3180	14	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	67.9677090054948	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTCACGTCC	6061	False	NA	NA	False	AATAAA	-14	NA	53336168	53228349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53313783_53313931_53314228_53314412_53321099_53321244_53336044
ES.458.27	chr1	-	3375	16	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	72.0920399366131	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTTTGTTTTCACGT	6093	False	NA	NA	False	AATAAA	-12	NA	53336136	53228351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53330915_53330995_53334229_53334406_53335317_53335431_53336044
ES.458.28	chr1	-	3903	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	74.4921924411805	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTTTGTTTTCACGT	6099	False	NA	NA	False	AATAAA	-12	NA	53336130	53228351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236485_53245720_53246572_53246734_53246867_53247121_53247245_53255389_53255507_53295787_53295952_53303784_53304045_53304110_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53335890
ES.458.29	chr1	-	3284	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	4	-6	intron_retention	FALSE	canonical	3	136	junction_1	15.0173453432031	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTTTGTTTTCACGT	6059	False	NA	NA	False	AATAAA	-12	NA	53336170	53228351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.3	chr1	-	2685	2	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	24391	182	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTATGGTGCCCTTGGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	53202376	53197553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53197948_53200085
ES.458.30	chr1	-	3003	13	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.7911286701039	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTTTGTTTTCACGT	6032	False	NA	NA	False	AATAAA	-12	NA	53336197	53228351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336109
ES.458.31	chr1	-	3117	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.8595326234947	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATATGGACTATAAAA	6099	False	NA	NA	False	TATAAA	-13	NA	53336130	53228365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53306986_53307090_53314228_53314412_53321099_53321252_53329537_53329583_53330915_53330995_53332275_53332446_53336044
ES.458.32	chr1	-	3172	14	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.8763219205683	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAATATGGACTAT	6057	False	NA	NA	False	TATAAA	-9	NA	53336172	53228369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53313783_53313931_53314228_53314412_53321099_53321252_53336044
ES.458.34	chr1	-	2818	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-3	-24	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	48.2219386991111	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAATATGGACTAT	6100	False	NA	NA	False	TATAAA	-9	NA	53336129	53228369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.35	chr1	-	2715	12	ISM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	47	2893	4	-2893	5prime_fragment	FALSE	canonical	3	139	junction_2	14.3797378106881	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTGCCTAAATTTTAT	6099	False	NA	NA	False	AATAAA	-31	NA	53336130	53231238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.36	chr1	-	2555	11	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	-1	-2894	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	50.4687031733529	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACCTGCCTAAATTTTA	6094	False	NA	NA	False	AATAAA	-30	NA	53336135	53231239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.37	chr1	-	1617	5	ISM	ENSMUSG00000026098.14	ENSMUST00000135246.8	2205	11	80670	-191	66061	191	3prime_fragment	FALSE	canonical	3	160	junction_4	11.6054943884352	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACAGAGTGGAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	53255506	53236079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389
ES.458.38	chr1	-	936	6	NNC	ENSMUSG00000026098.14	novel	647	4	NA	NA	2	6613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.3037123713926	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAACTGTGCAGTTTG	6057	False	NA	NA	False	NA	NA	NA	53336172	53295440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53295647_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.39	chr1	-	8457	1	Genic_Genomic	ENSMUSG00000026098.14	novel	NA	NA	NA	NA	15891	4834	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAATGCTATCAAC	NA	False	NA	NA	False	NA	NA	NA	53305676	53297219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_53297200_53305700
ES.458.4	chr1	-	636	9	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	14.6452850774575	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATACTAGAACAGAATGG	NA	False	NA	NA	False	AATAAA	-20	NA	53226770	53197743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53197948_53202384_53202428_53209396_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ES.458.40	chr1	-	3534	6	NNC	ENSMUSG00000026098.14	novel	3054	5	NA	NA	2	500	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.7348004552729	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGGCTTAAGCATGTT	6057	False	NA	NA	False	NA	NA	NA	53336172	53301553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53304045_53304110_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.41	chr1	-	3558	5	FSM	ENSMUSG00000026098.14	ENSMUST00000142922.2	3054	5	-5	-499	3	499	multi-exon	FALSE	canonical	3	9	junction_1	65.1267993993256	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTGGCTTAAGCATGT	6098	False	NA	NA	False	NA	NA	NA	53336131	53301554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.42	chr1	-	3497	1	FSM	ENSMUSG00000026098.14	ENSMUST00000188890.2	1723	1	2	-1776	2	1776	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGCTAAGGGAAATGGCT	6057	False	NA	NA	False	NA	NA	NA	53336172	53332675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53332700_53336200
ES.458.5	chr1	-	7448	9	NNC	ENSMUSG00000060715.10	novel	646	9	NA	NA	2	-4329	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.3546034006146	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGATGAGTCAAGTA	NA	False	NA	NA	False	AATAAA	-27	NA	53226765	53202087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53206281_53206334_53206454_53206644_53209420_53209546_53209618_53216928_53216987_53221001_53221055_53221653_53221704_53224373_53224450_53226712
ES.458.6	chr1	-	6484	13	FSM	ENSMUSG00000026098.14_ENSMUSG00000060715.10	ENSMUST00000027267.14	3054	13	46	-3476	3	3476	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGGCTTTTTATTCCT	6098	False	NA	NA	False	ATTAAA	-19	NA	53336131	53224869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.7	chr1	-	3594	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	7	-547	4	547	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTTCCTTTTGCTCA	6059	False	NA	NA	False	TATAAA	-42	NA	53336170	53227798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ES.458.8	chr1	-	4527	15	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	1	523	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.2725796659901	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACACATAAAAAGTGTAAT	6104	False	NA	NA	False	TATAAA	-32	NA	53336125	53227822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53303784_53304588_53306986_53307090_53314228_53314412_53321099_53321252_53329537_53329583_53335890
ES.458.9	chr1	-	3094	14	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	55.8467895704439	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6057	False	NA	NA	False	AATAAA	-18	NA	53336172	53228345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53329537_53329583_53336044
ES.4580.1	chr11	-	1968	5	FSM	ENSMUSG00000057967.13	ENSMUST00000020507.8	1086	5	-422	-460	-422	460	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAAGAGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	33097822	33066969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33068032_33074612_33074720_33084202_33084384_33097044_33097082_33097241
ES.4581.100	chr11	-	1183	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7953.85979823633	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTAGCACTGTTTC	NA	False	NA	-42	True	AATAAA	-11	NA	33113077	33102519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109929_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33113013
ES.4581.101	chr11	-	1274	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTTAATAAAGTAGCA	NA	False	NA	-49	True	AATAAA	-4	NA	33113077	33102526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109923_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.102	chr11	-	1712	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	1	-556	0	556	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	3654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTTTGGGCCCAGAGT	NA	False	NA	NA	False	AATAAA	-14	NA	33113076	33104370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.103	chr11	-	1223	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	-60	-6	-60	6	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTGACAATATTTT	NA	False	NA	-16	True	AATAAA	-21	NA	33113137	33104920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.105	chr11	-	1142	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7906.24986409994	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATGTATGTGACAAT	NA	False	NA	-21	True	AATAAA	-16	NA	33113071	33104925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109943_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.108	chr11	-	1368	10	FSM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-1	-401	0	0	multi-exon	FALSE	canonical	3	29	junction_1	6470.30156337304	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113077	33104926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33105432_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.109	chr11	-	1152	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_6	7636.61791212592	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113078	33104926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.111	chr11	-	1063	6	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	2425	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	9683.70085039805	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33110647	33104926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33110105_33110293
ES.4581.113	chr11	-	1939	9	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	2640	0	0	5prime_fragment	FALSE	canonical	3	16927	junction_6	2010.17231459768	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113077	33104926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.116	chr11	-	1142	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7773.54423352805	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113071	33104926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106999_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.117	chr11	-	1121	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6479.01620523165	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAGGATGTATGTGAC	NA	False	NA	-24	True	AATAAA	-13	NA	33113071	33104928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106030_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.119	chr11	-	1141	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7906.24986409994	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATAAGGATGTATGTG	NA	False	NA	-26	True	AATAAA	-11	NA	33113071	33104930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107043_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.12	chr11	-	3275	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-52	0	intron_retention	FALSE	canonical	3	16927	junction_7	1895.24750655715	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113129	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.120	chr11	-	1141	10	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7581.32144903382	3648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATAAGGATGTATGTG	NA	False	NA	-26	True	AATAAA	-11	NA	33113072	33104930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105221_33106002_33106098_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.124	chr11	-	958	10	FSM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	8	0	4	0	multi-exon	FALSE	canonical	3	29	junction_1	6470.30156337304	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCTGGTGTCACTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	33113068	33105327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33105432_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.125	chr11	-	1030	10	NNC	ENSMUSG00000057113.14	novel	966	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	8319.759171194	3636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCTGGTGTCACTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	33113071	33105327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33105432_33106002_33106105_33106663_33106817_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.126	chr11	-	750	8	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-43	1389	-42	-691	5prime_fragment	FALSE	canonical	3	16927	junction_5	1688.56497460696	3598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAACCAAAATGGA	NA	False	NA	3	True	NA	NA	NA	33113119	33106716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.13	chr11	-	5876	9	NNC	ENSMUSG00000057113.14	novel	1192	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	8381.14486418025	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113072	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33105221_33106002_33106105_33106663_33106748_33106990_33110105_33110274_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.14	chr11	-	4515	9	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	16927	junction_7	1871.12290817573	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113075	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547
ES.4581.15	chr11	-	6674	7	NIC	ENSMUSG00000057113.14	novel	1192	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	16996	junction_4	1881.25077334794	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113072	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33109996_33110333_33111226_33111547_33111628_33112921
ES.4581.16	chr11	-	1196	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6154.22693439233	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113078	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111167_33111574_33111628_33112921
ES.4581.17	chr11	-	4318	5	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1554	0	intron_retention	FALSE	non_canonical	0	0	junction_4	9274.09335191317	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33108831	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33108465_33108533
ES.4581.18	chr11	-	4160	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	16927	junction_7	1917.25350114541	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113071	33102509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.2	chr11	-	3418	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	134	-1919	0	1919	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	3719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCATGTTGCCAAGTTC	NA	False	NA	NA	False	NA	NA	NA	33113072	33100367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.22	chr11	-	1265	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107034_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.23	chr11	-	1338	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7794.88326875738	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113075	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33104964_33105025_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.25	chr11	-	1280	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	6180.4734001531	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113071	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110327_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.27	chr11	-	2577	10	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	126	224	-3	0	intron_retention	FALSE	canonical	3	16927	junction_8	1793.60603736828	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113080	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547
ES.4581.29	chr11	-	1275	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113078	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109939_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.3	chr11	-	3410	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	9	-1786	9	1786	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	3719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTTGGCTACCTGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	33113197	33100500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.36	chr11	-	1276	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5941.6931265423	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106098_33106659_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.37	chr11	-	1265	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8003.4222030329	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106739_33106990_33107049_33109939_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.39	chr11	-	1255	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6182.80601021898	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113075	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104054_33106018_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.4	chr11	-	3278	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	1785	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_7	5857.07688527306	3719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGTTGGCTACCTGG	NA	False	NA	NA	False	ATTAAA	-23	NA	33113072	33100501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.40	chr11	-	2442	11	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	2877	junction_2	5362.8838370787	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113079	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.41	chr11	-	1271	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	6146.61064001942	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110342_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.42	chr11	-	1285	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6051.89838067362	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112915
ES.4581.44	chr11	-	1210	10	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	6328.50538788144	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33112910
ES.4581.46	chr11	-	1241	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6051.89838067362	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111589_33112921
ES.4581.47	chr11	-	1273	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_7	5857.07688527306	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.49	chr11	-	1195	10	FSM	ENSMUSG00000057113.14	ENSMUST00000093201.13	1192	10	-4	1	0	0	multi-exon	FALSE	canonical	2	5	junction_3	6125.12875954356	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.50	chr11	-	1015	9	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1866	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	6712.07888809421	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33111206	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109986_33110333_33110441_33110827_33110922_33111105
ES.4581.51	chr11	-	1178	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6249.99416888617	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33104061_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.53	chr11	-	1226	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5898.47077954872	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102541_33102594_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.54	chr11	-	1274	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	6051.89838067362	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113077	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112927
ES.4581.55	chr11	-	933	8	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7108.3423309431	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113076	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110429_33112961
ES.4581.56	chr11	-	1261	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6157.24081143494	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33113070	33102510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110429_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.57	chr11	-	1259	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113075	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109951_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.6	chr11	-	1683	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	135	-185	1	185	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	3713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGCTTCGTGCCTGA	NA	False	NA	NA	False	NA	NA	NA	33113071	33102101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.60	chr11	-	1184	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	6482.57543318345	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113076	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33111105_33111226_33111547_33111628_33112921
ES.4581.62	chr11	-	1273	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6182.80601021898	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113077	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106008_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.63	chr11	-	1273	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113077	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107043_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.64	chr11	-	1844	9	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	16996	junction_6	1796.68985567905	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113071	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33111226_33111547_33111628_33112921
ES.4581.65	chr11	-	4354	9	NIC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	-1	intron_retention	FALSE	canonical	3	16927	junction_6	2010.17231459768	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113077	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.67	chr11	-	5322	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-1	intron_retention	FALSE	canonical	3	2877	junction_2	5646.70669013757	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113075	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33105221_33106002_33106105_33106663_33106748_33106990_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.7	chr11	-	1505	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	-1	0	1	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTCAGTGGATAGTG	NA	False	NA	NA	False	AATACA	-10	NA	33113077	33102285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.71	chr11	-	3566	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	6	-2415	1	-1	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTGTTTCTATTTGCT	NA	False	NA	-34	True	AATAAA	-19	NA	33113071	33102511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.72	chr11	-	3770	9	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	4	-2	intron_retention	FALSE	canonical	3	16927	junction_6	1588.43775452487	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCACTGTTTCTATTTGC	NA	False	NA	-35	True	AATAAA	-18	NA	33113068	33102512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.74	chr11	-	1267	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6152.71604740541	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCACTGTTTCTATTTG	NA	False	NA	-36	True	AATAAA	-17	NA	33113077	33102513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102843_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.77	chr11	-	1315	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-57	-8	at_least_one_novel_splicesite	FALSE	canonical	1	199	junction_10	5994.63016040189	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113134	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111614_33112921
ES.4581.78	chr11	-	1252	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6157.24081143494	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113075	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110423_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.8	chr11	-	1494	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	-61	200	-61	23	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCATACTTTGAAGTT	NA	False	NA	-9	True	AATAAA	-44	NA	33113267	33102486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.80	chr11	-	1254	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6177.79064795822	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113071	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109945_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.82	chr11	-	1257	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6182.80601021898	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113077	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106017_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.85	chr11	-	1262	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6095.74878091281	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113076	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106999_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.86	chr11	-	1248	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8003.4222030329	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113072	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106741_33106990_33107049_33109945_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.87	chr11	-	6100	9	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	16927	junction_6	1979.95006250158	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113078	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.88	chr11	-	1307	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7792.06274899641	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113078	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33104838_33104873_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.9	chr11	-	8338	6	NIC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	0	19	intron_retention	FALSE	canonical	3	2877	junction_1	7188.4481941515	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACTCTCATACTTTGA	NA	False	NA	-13	True	AATAAA	-40	NA	33113072	33102490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33109996_33110333_33111226_33111547
ES.4581.90	chr11	-	3375	10	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	2	-8	intron_retention	FALSE	canonical	0	0	junction_5	6511.90847222358	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113070	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33107049_33109933_33110105_33110274_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.93	chr11	-	1487	12	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8478.43953364178	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113053	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103985_33104061_33104964_33105221_33106002_33106105_33106663_33106748_33107007_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4581.94	chr11	-	1264	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6152.71604740541	3711	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTAGCACTGTTTCT	NA	False	NA	-41	True	AATAAA	-12	NA	33113075	33102518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33102853_33103991_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ES.4582.1	chr11	+	147	1	Intergenic	novelGene_3539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	33137162	33137309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33137200_33137300
ES.4583.1	chr11	+	2393	1	Intergenic	novelGene_3541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCAAGGACAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	33199663	33202056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33199700_33202100
ES.4584.1	chr11	+	286	1	Intergenic	novelGene_3543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	33229513	33229799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33229500_33229800
ES.4585.1	chr11	+	3097	8	Intergenic	novelGene_3544	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTTAACATTTCCATA	NA	False	NA	NA	False	NA	NA	NA	33278380	33434059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33279543_33391800_33391939_33402443_33402547_33424880_33425081_33428163_33428337_33429142_33429289_33431020_33431141_33433004
ES.4585.2	chr11	+	3848	7	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTTAACATTTCCATA	NA	False	NA	NA	False	NA	NA	NA	33389887	33434059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33391939_33402443_33402547_33424880_33425081_33428163_33428337_33429142_33429289_33431020_33431141_33433004
ES.4585.4	chr11	+	5382	5	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTTAACATTTCCATA	NA	False	NA	NA	False	NA	NA	NA	33389888	33434059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33391939_33402443_33402549_33428162_33428337_33429142_33431141_33433004
ES.4585.6	chr11	+	5542	4	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33422740	33434035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33425081_33428163_33428337_33429142_33431141_33433004
ES.4585.7	chr11	+	3829	5	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCCTTGTTAACATTT	NA	False	NA	NA	False	NA	NA	NA	33422740	33434054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33425081_33428163_33428337_33429142_33429289_33431020_33431141_33433004
ES.4585.8	chr11	+	1147	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGTTAACATTTCCATA	NA	False	NA	NA	False	NA	NA	NA	33432912	33434059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33432900_33434100
ES.4585.9	chr11	+	5462	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGATTAGGCACACAG	NA	False	NA	NA	False	NA	NA	NA	33432913	33438375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33432900_33438400
ES.4586.1	chr11	+	188	1	Intergenic	novelGene_3549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGACATATGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33444756	33444944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33444800_33444900
ES.4587.1	chr11	+	175	1	Intergenic	novelGene_3550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	33448136	33448311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33448100_33448300
ES.4588.1	chr11	+	1877	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33449628	33451505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33449600_33451500
ES.4589.1	chr11	+	179	1	Intergenic	novelGene_3551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGTAG	NA	False	NA	NA	False	NA	NA	NA	33455949	33456128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33455900_33456100
ES.459.1	chr1	+	1914	10	Fusion	ENSMUSG00000100679.2_ENSMUSG00000026096.15	novel	1067	5	NA	NA	-52	-6	multi-exon	FALSE	canonical	2	9	junction_3	51.218486246016	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53336217	53365320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_53336348_53338130_53338312_53344613_53344766_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.10	chr1	+	1936	5	NNC	ENSMUSG00000026097.10	novel	1910	4	NA	NA	49	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	101.96414811099	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATTTTAAGTTTTCC	NA	False	NA	22	True	AATAAA	-16	NA	53336302	53349397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_53336348_53338130_53338312_53338510_53338657_53344613_53344766_53347985
ES.459.11	chr1	+	3854	2	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	8445	-2304	8445	2304	3prime_fragment	FALSE	canonical	3	215	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAATGAGTTTGACTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	53344698	53351772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53344766_53347985
ES.459.12	chr1	+	7755	7	Fusion	ENSMUSG00000026096.15_ENSMUSG00000026097.10	novel	1868	8	NA	NA	-5083	-17	intron_retention	FALSE	canonical	3	122	junction_1	14.5830952361516	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53347699	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.13	chr1	+	4547	8	NIC	ENSMUSG00000026096.15	novel	1723	9	NA	NA	-9	-6	intron_retention	FALSE	canonical	0	0	junction_4	68.8844047988352	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53352803	53365320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53353018_53354014_53357449_53359101_53359456_53360238_53360370_53360463_53360544_53360654_53360727_53362325_53362430_53365162
ES.459.14	chr1	+	1439	3	FSM	ENSMUSG00000026096.15	ENSMUST00000135786.8	598	3	-12	-829	-9	829	multi-exon	FALSE	canonical	1	1	junction_2	79	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTCTTCATATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	53352803	53356620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014_53354259_53355639
ES.459.15	chr1	+	1184	6	NIC	ENSMUSG00000026096.15	novel	1592	7	NA	NA	-4	-22	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	69.3501261714786	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGGAAAAAAAAAAACCAG	NA	False	NA	-11	True	AATAAA	-9	NA	53352808	53365304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53362325_53362430_53365162
ES.459.17	chr1	+	1449	7	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	47.461387815079	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTGGCCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	53352810	53365499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.18	chr1	+	4490	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	-5	-480	-2	480	multi-exon	FALSE	canonical	3	159	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAGGTATTCAGAGATA	NA	False	NA	NA	False	NA	NA	NA	53352810	53358297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014
ES.459.19	chr1	+	3214	8	NNC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.8781932875029	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53352811	53365320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53363605
ES.459.2	chr1	+	1854	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	-9	65	-9	-65	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGTTTTCCAAGACA	NA	False	NA	28	True	AATAAA	-22	NA	53336244	53349403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ES.459.20	chr1	+	1664	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	29	175	-1	1	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATTTCGTGTTTCAA	NA	False	NA	12	True	AATAAA	-32	NA	53352811	53365327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.21	chr1	+	1574	7	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-1	-17	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	52.920275467495	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53352811	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53362325_53362430_53365162
ES.459.22	chr1	+	1428	3	ISM	ENSMUSG00000026096.15	ENSMUST00000114484.8	2283	7	-9	5184	0	222	5prime_fragment	FALSE	canonical	3	122	junction_2	18.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATAGTTTCCAGGTATT	NA	False	NA	NA	False	AATAAA	-30	NA	53352812	53358039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53353018_53354014_53354259_53357060
ES.459.23	chr1	+	2993	3	ISM	ENSMUSG00000026096.15	ENSMUST00000114484.8	2283	7	-9	3619	0	1787	intron_retention	FALSE	canonical	3	122	junction_2	18.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACATAACATCTTTATGG	NA	False	NA	NA	False	AATAAA	-25	NA	53352812	53359604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53353018_53354014_53354259_53357060
ES.459.24	chr1	+	1835	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	30	3	0	-3	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTGGCCTTGTGTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	53352812	53365499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.25	chr1	+	4378	7	FSM	ENSMUSG00000026096.15	ENSMUST00000114484.8	2283	7	-9	-2086	0	-17	multi-exon	FALSE	canonical	3	122	junction_2	15.2388392675499	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53352812	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325
ES.459.27	chr1	+	4763	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	-2	-756	1	756	multi-exon	FALSE	canonical	3	159	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACTTGTTTGCTCATT	NA	False	NA	NA	False	AATAAA	-23	NA	53352813	53358573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53353018_53354014
ES.459.28	chr1	+	1453	6	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	-3	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	60.2162768692984	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53352828	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53365162
ES.459.29	chr1	+	3960	4	Fusion	ENSMUSG00000100679.2_ENSMUSG00000026096.15	novel	1067	5	NA	NA	-2990	-17	intron_retention	FALSE	canonical	3	11	junction_2	70.6179077068196	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53355877	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_53359456_53360238_53360370_53362325_53362430_53365162
ES.459.30	chr1	+	1894	6	ISM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	3580	193	-2505	-17	3prime_fragment	FALSE	canonical	3	133	junction_1	12.61744823647	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCAGTCAAG	NA	False	NA	-6	True	AATAAA	-14	NA	53356362	53365309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.31	chr1	+	2993	5	FSM	ENSMUSG00000100679.2_ENSMUSG00000026096.15	ENSMUST00000150115.2	1067	5	-1940	14	-1940	-6	multi-exon	FALSE	canonical	3	135	junction_2	12.0908022893437	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53356927	53365320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.32	chr1	+	3525	3	NIC	ENSMUSG00000026096.15	novel	1067	5	NA	NA	-411	-5	intron_retention	FALSE	canonical	3	155	junction_2	5.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATATTGGCCTTGTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	53358456	53365497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_53359456_53360238_53362430_53365162
ES.459.4	chr1	+	1825	4	NNC	ENSMUSG00000026097.10	novel	1910	4	NA	NA	8	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	97.3869715219763	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATTTTAAGTTTTCC	NA	False	NA	22	True	AATAAA	-16	NA	53336261	53349397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_53336348_53338130_53338306_53344613_53344766_53347985
ES.459.5	chr1	+	5056	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	8	66	8	-66	intron_retention	FALSE	canonical	3	184	junction_2	6.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAGTTTTCCAAGAC	NA	False	NA	27	True	AATAAA	-21	NA	53336261	53349402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53336348_53338130_53338312_53344613
ES.459.6	chr1	+	7891	10	Fusion	ENSMUSG00000026096.15_ENSMUSG00000026097.10	novel	1723	9	NA	NA	16	-6	intron_retention	FALSE	canonical	3	122	junction_4	30.1531072452444	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAGAATCATTTCGT	NA	False	NA	5	True	AATAAA	-25	NA	53336269	53365320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ES.459.7	chr1	+	13943	3	ISM	ENSMUSG00000026096.15_ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	16	-8829	16	480	intron_retention	FALSE	canonical	3	184	junction_2	6.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAGGTATTCAGAGATA	NA	False	NA	NA	False	NA	NA	NA	53336269	53358297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_53336348_53338130_53338312_53344613
ES.459.8	chr1	+	6411	4	FSM	ENSMUSG00000026096.15_ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	17	-4518	17	-1805	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAATATTTCTGTAACTC	NA	False	NA	NA	False	AATAAA	-18	NA	53336270	53353986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ES.4590.1	chr11	+	870	1	Intergenic	novelGene_3552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGTCAAGGTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	33457008	33457878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33457000_33457900
ES.4591.1	chr11	+	175	1	Intergenic	novelGene_3553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	33461178	33461353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33461200_33461400
ES.4592.1	chr11	-	7639	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	17	2595	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAACATAAGTTATTTA	NA	False	NA	NA	False	AATAAA	-30	NA	33463729	33159199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.10	chr11	-	4992	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463771	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.100	chr11	-	3144	20	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	84777	-16	-178	5prime_fragment	FALSE	canonical	3	105	junction_6	31.5999053261319	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTACTCTATGAGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	33463762	33246571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.101	chr11	-	3124	20	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	31	-178	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	65.2196799148803	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTACTCTATGAGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	33463715	33246571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.102	chr11	-	3033	19	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	3	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	70.8560747807366	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTACTCTATGAGTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	33463743	33246571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425079_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436085_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.103	chr11	-	3182	21	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	5	-179	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	49.184245445061	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGTACTCTATGAGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	33463741	33246572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.104	chr11	-	5444	15	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	4	-22129	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	80.2933715209673	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACATAAAAGAGCTCT	NA	False	NA	NA	False	NA	NA	NA	33463742	33274895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424888_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436085_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.105	chr11	-	4289	16	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-8	-23459	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	72.6931450229892	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACAGCCTGAAGTTTCC	NA	False	NA	NA	False	ATTAAA	-28	NA	33463754	33276225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.106	chr11	-	4165	1	Intergenic	novelGene_3545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATTTTAGAAGTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	33314070	33309905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33309900_33314100
ES.4592.107	chr11	-	1603	1	Intergenic	novelGene_3546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGCCGTTGTACAAATT	NA	False	NA	NA	False	ATTAAA	-25	NA	33341780	33340177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33340200_33341800
ES.4592.108	chr11	-	3859	1	FSM	ENSMUSG00000069913.4	ENSMUST00000118265.2	388	1	-1344	-2127	-1344	2127	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTTTAATTATTTTG	NA	False	NA	NA	False	AATAAA	-41	NA	33346610	33342751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33342800_33346600
ES.4592.109	chr11	-	2731	15	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	15	44825	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.1386766891433	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCTGAATGAACCAGCA	NA	False	NA	NA	False	AATAAA	-38	NA	33463731	33377590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33378500_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.11	chr11	-	4892	27	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	67.9260387889808	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463729	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268292_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33433794_33433863_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.110	chr11	-	5493	1	Intergenic	novelGene_3547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGACTATACATACTG	NA	False	NA	NA	False	NA	NA	NA	33383173	33377680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33377700_33383200
ES.4592.111	chr11	-	177	1	Intergenic	novelGene_3548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATTTTTGAAAG	NA	False	NA	NA	False	NA	NA	NA	33385185	33385008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33385000_33385200
ES.4592.112	chr11	-	3344	9	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	25346	32760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	106.961368610354	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATTAGTTTGAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	33437748	33389655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33391939_33402443_33402550_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433101_33435567_33435743_33435917_33436057_33437642
ES.4592.113	chr11	-	2222	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	5	2794	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	58.5083090015617	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTGTATATTGCTT	NA	False	NA	NA	False	NA	NA	NA	33463741	33419621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420254_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.114	chr11	-	2128	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-29	2794	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	58.7572099594784	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTGTATATTGCTT	NA	False	NA	NA	False	NA	NA	NA	33463775	33419621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420126_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.115	chr11	-	2152	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	17	2793	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	73.4591250666352	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGATTGTATATTGCT	NA	False	NA	NA	False	NA	NA	NA	33463729	33419622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420254_33424886_33425081_33428163_33428337_33429142_33429233_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.116	chr11	-	1997	12	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	10	2793	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	72.3285661934709	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGATTGTATATTGCT	NA	False	NA	NA	False	NA	NA	NA	33463736	33419622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420126_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.117	chr11	-	2030	12	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	5	2786	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.1993894875886	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTTCATTTGATTGTA	NA	False	NA	NA	False	NA	NA	NA	33463637	33419629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420267_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441391_33443250_33443418_33454681_33454829_33463601
ES.4592.118	chr11	-	6581	15	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-19	2786	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.635781084121	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTTCATTTGATTGTA	NA	False	NA	NA	False	NA	NA	NA	33463765	33419629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420507_33420679_33421371_33421430_33422681_33422737_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.119	chr11	-	6635	15	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	1	2786	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.635781084121	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTTCATTTGATTGTA	NA	False	NA	NA	False	NA	NA	NA	33463745	33419629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420508_33420606_33421371_33421430_33422681_33422737_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.12	chr11	-	5354	30	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-134	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	60.6137456302952	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463228	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33462949
ES.4592.120	chr11	-	2060	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	5	2619	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	56.7731230425102	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCATTGGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	33463741	33419796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33420267_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.121	chr11	-	2722	12	FSM	ENSMUSG00000040594.20	ENSMUST00000037522.14	3950	12	-94	1322	22	-1322	multi-exon	FALSE	canonical	3	149	junction_9	26.6231738984996	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGCAATGTATGTCT	NA	False	NA	NA	False	TTTAAA	-22	NA	33463724	33423737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.122	chr11	-	1782	10	NIC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	-11	-5287	combination_of_known_splicesites	FALSE	canonical	3	45	junction_8	54.2156189057483	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGTGCACAATTTTAT	NA	False	NA	NA	False	NA	NA	NA	33463757	33427702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.123	chr11	-	1445	11	ISM	ENSMUSG00000040594.20	ENSMUST00000037522.14	3950	12	-132	5720	-16	-5720	5prime_fragment	FALSE	canonical	3	149	junction_8	27.2435313423205	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCTCATCTTGTAATT	NA	False	NA	NA	False	NA	NA	NA	33463762	33428135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.14	chr11	-	4583	24	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-6	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	53.4673725218065	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	33463648	33161804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.17	chr11	-	4135	13	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	3200	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	69.125640443085	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	33276815	33161804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33253918_33254011_33268238_33268348_33275707
ES.4592.18	chr11	-	5192	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-141	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	53.0303508591533	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	33463235	33161804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33462949
ES.4592.19	chr11	-	5116	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	37	-10	combination_of_known_junctions	FALSE	canonical	1	9	junction_14	49.5636058051486	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGAACGCTGTGGGC	NA	False	NA	NA	False	ATTAAA	-9	NA	33463709	33161804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.2	chr11	-	7898	3	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	291095	-2585	107364	2585	3prime_fragment	FALSE	canonical	3	146	junction_2	15	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACAAAAGCTATAACAT	NA	False	NA	NA	False	AATAAA	-20	NA	33172651	33159209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33163499_33167291_33167420_33169170
ES.4592.22	chr11	-	4839	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	5	157	5	-157	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAATGCCTGGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	33463741	33161951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.23	chr11	-	4640	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	38	-292	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCCTCTTTGGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	33463708	33162086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.24	chr11	-	4602	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-19	-478	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAAGTGTCTGTCTTCC	NA	False	NA	NA	False	NA	NA	NA	33463765	33162272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.25	chr11	-	4529	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-8	480	-8	-480	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCAAGTGTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	33463754	33162274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.26	chr11	-	4480	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-19	-483	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	42.9569919222338	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGCCCAAGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	33463765	33162277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429233_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.27	chr11	-	4440	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-16	-486	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCATGCCCAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	33463762	33162280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.28	chr11	-	2947	3	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	292872	589	109141	-589	3prime_fragment	FALSE	canonical	3	146	junction_2	15	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGGCTCTTGCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	33170874	33162383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33163499_33167291_33167420_33169170
ES.4592.29	chr11	-	4151	15	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	2692	-594	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	77.3234658260152	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCACAGGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	33277323	33162388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33212016_33212099_33212633_33212667_33213600_33213670_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275707
ES.4592.3	chr11	-	5067	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTGTGGGCTCCCTTCTC	NA	False	NA	NA	False	ATTAAA	-18	NA	33463753	33161795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.30	chr11	-	4416	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-11	596	-11	-596	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATCCACAGGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	33463757	33162390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.31	chr11	-	4440	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-4	-625	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAAGGCTGACCTCAC	NA	False	NA	NA	False	AATAAA	-26	NA	33463750	33162419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.32	chr11	-	4274	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	5	-626	combination_of_known_splicesites	FALSE	canonical	1	7	junction_3	63.7600554779888	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGAAAGGCTGACCTCA	NA	False	NA	NA	False	AATAAA	-25	NA	33463741	33162420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.33	chr11	-	4294	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-16	-632	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGACCTGAAAGGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	33463762	33162426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.34	chr11	-	4330	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	1	-639	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGATCAGACCTGA	NA	False	NA	NA	False	AATAAA	-12	NA	33463745	33162433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.35	chr11	-	4591	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	6468	-640	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_17	63.1391652131499	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTCTGATCAGACCTG	NA	False	NA	NA	False	AATAAA	-11	NA	33456626	33162434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354200_33391802_33391939_33402443_33402550_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33456175
ES.4592.36	chr11	-	4298	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	1	702	1	-702	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGGTTTCCTATCTCACT	NA	False	NA	NA	False	NA	NA	NA	33463745	33162496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.37	chr11	-	3934	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-8	1075	-8	-1075	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATGACTAACAAACAAT	NA	False	NA	NA	False	GATAAA	-21	NA	33463754	33162869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.38	chr11	-	3727	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-21	1295	-21	-1295	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAGCCCTCACTTCA	NA	False	NA	NA	False	AGTAAA	-39	NA	33463767	33163089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.4	chr11	-	3954	12	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	3421	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.125524575868	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33276594	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275582
ES.4592.40	chr11	-	3761	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-30	-1330	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGTGCCTGTGACCACG	NA	False	NA	80	True	AGTAAA	-4	NA	33463776	33163124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.41	chr11	-	3738	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-88	-1411	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	53.4231638783731	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463834	33163205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268480_33278431_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.42	chr11	-	3270	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	26	-1411	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	54.1633514385258	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463720	33163205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.43	chr11	-	3750	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-160	1411	-160	-1411	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463906	33163205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.44	chr11	-	3520	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-21	-1411	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463767	33163205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.45	chr11	-	6230	27	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	32	-1411	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	45.6115091102411	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463714	33163205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275707_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.47	chr11	-	3176	26	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	32	-1412	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	56.0293351736392	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGTTTCAAGTCTAT	NA	False	NA	-2	True	TATAAA	-45	NA	33463714	33163206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436057_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.49	chr11	-	3620	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-6	-1414	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	55.6179156182871	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACATGTTTCAAGTCT	NA	False	NA	-4	True	TATAAA	-43	NA	33463752	33163208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.5	chr11	-	4573	25	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-20	-3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	52.2478069715211	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463766	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.50	chr11	-	3210	25	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-17	-1414	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.1342644886805	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACATGTTTCAAGTCT	NA	False	NA	-4	True	TATAAA	-43	NA	33463763	33163208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.52	chr11	-	3813	30	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-4	-1414	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	53.3730727889059	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCACATGTTTCAAGTCT	NA	False	NA	-4	True	TATAAA	-43	NA	33463750	33163208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.53	chr11	-	3606	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	4	-1417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	68.1409852992384	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGCACATGTTTCAAG	NA	False	NA	-7	True	TATAAA	-40	NA	33463742	33163211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278442_33278525_33279470_33279545_33287854_33287915_33354037_33354197_33391802_33391939_33402443_33402550_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.54	chr11	-	3654	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	1	-1417	combination_of_known_splicesites	FALSE	canonical	1	9	junction_14	55.3070987439023	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGCACATGTTTCAAG	NA	False	NA	-7	True	TATAAA	-40	NA	33463745	33163211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.55	chr11	-	3731	30	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	5	-1417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	65.1975685809708	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGCACATGTTTCAAG	NA	False	NA	-7	True	TATAAA	-40	NA	33463741	33163211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268472_33278443_33278525_33279470_33279545_33341923_33341978_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.56	chr11	-	3864	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-118	-1417	combination_of_known_junctions	FALSE	canonical	1	9	junction_14	49.5636058051486	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGCACATGTTTCAAG	NA	False	NA	-7	True	TATAAA	-40	NA	33463864	33163211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.58	chr11	-	3714	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	1	-1417	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	58.3733147726855	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGCACATGTTTCAAG	NA	False	NA	-7	True	TATAAA	-40	NA	33463745	33163211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.6	chr11	-	5005	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-7	3	-7	-3	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463753	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.60	chr11	-	3666	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	8	-1419	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	53.5667974188703	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGCAGCACATGTTTCA	NA	False	NA	-9	True	TATAAA	-38	NA	33463738	33163213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33253918_33254011_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.61	chr11	-	3551	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-5	-1419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	44.6150736982177	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGCAGCACATGTTTCA	NA	False	NA	-9	True	TATAAA	-38	NA	33463751	33163213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402514_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.63	chr11	-	3557	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-16	-1429	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGTATTCAAAGCAGC	NA	False	NA	-19	True	TATAAA	-28	NA	33463762	33163223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.64	chr11	-	3661	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	24	-1431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	52.5919020692854	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTCAGTATTCAAAGCA	NA	False	NA	-21	True	TATAAA	-26	NA	33463722	33163225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354197_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.65	chr11	-	3720	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	4	-1433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	52.4833671417013	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATTCAGTATTCAAAG	NA	False	NA	-23	True	TATAAA	-24	NA	33463742	33163227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33383929_33384086_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.67	chr11	-	3608	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	18	-1440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	57.9564426577567	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAATGTAAATTCAGTA	NA	False	NA	-30	True	TATAAA	-17	NA	33463728	33163234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33383929_33384086_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.68	chr11	-	3622	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	4	-1440	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.9181962183259	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAATGTAAATTCAGTA	NA	False	NA	-30	True	TATAAA	-17	NA	33463742	33163234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193286_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278444_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436081_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.69	chr11	-	3202	26	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	5	-1440	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	44.852005529296	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAATGTAAATTCAGTA	NA	False	NA	-30	True	TATAAA	-17	NA	33463741	33163234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.7	chr11	-	4900	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.6445128127727	321	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463764	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33214635_33214775_33216109_33216325_33233907_33233991_33237307_33237336_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.70	chr11	-	6523	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-165	-1440	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	67.5100427147468	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACAATGTAAATTCAGTA	NA	False	NA	-30	True	TATAAA	-17	NA	33463259	33163234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275707_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463046
ES.4592.71	chr11	-	3709	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-6	-1441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	68.8436838506079	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAATGTAAATTCAGT	NA	False	NA	-31	True	TATAAA	-16	NA	33463752	33163235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33267176_33267293_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.72	chr11	-	3089	3	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	291878	1441	108147	-1441	3prime_fragment	FALSE	canonical	3	146	junction_2	15	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAATGTAAATTCAGT	NA	False	NA	-31	True	TATAAA	-16	NA	33171868	33163235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33163499_33167291_33167420_33169170
ES.4592.73	chr11	-	3646	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	1	-1441	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	58.3733147726855	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAATGTAAATTCAGT	NA	False	NA	-31	True	TATAAA	-16	NA	33463745	33163235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.75	chr11	-	3832	30	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-134	-1442	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_23	67.0640810206113	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATACAATGTAAATTCAG	NA	False	NA	-32	True	TATAAA	-15	NA	33463228	33163236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33436268_33436415_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33456842_33456933_33463046
ES.4592.76	chr11	-	6248	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-34	-1442	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	66.1690896302539	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATACAATGTAAATTCAG	NA	False	NA	-32	True	TATAAA	-15	NA	33463676	33163236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275707_33278525_33279470_33279545_33287854_33287915_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.77	chr11	-	3629	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-11	-1443	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACATACAATGTAAATTCA	NA	False	NA	-33	True	TATAAA	-14	NA	33463757	33163237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.78	chr11	-	3538	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	4	-1443	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	62.5870477491418	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACATACAATGTAAATTCA	NA	False	NA	-33	True	TATAAA	-14	NA	33463742	33163237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33463601
ES.4592.79	chr11	-	6415	29	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-7	-1443	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	61.8312693331371	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACATACAATGTAAATTCA	NA	False	NA	-33	True	TATAAA	-14	NA	33463753	33163237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33275707_33278525_33279470_33279545_33287854_33287915_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.8	chr11	-	4906	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGGCTCCCTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	33463745	33161797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.80	chr11	-	3691	28	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-134	-1444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	44.8439758200869	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACATACAATGTAAATTC	NA	False	NA	-34	True	TATAAA	-13	NA	33463228	33163238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33462949
ES.4592.81	chr11	-	3816	26	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	28	-30601	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	45.3303606868509	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTATTGTCATTAGTG	NA	False	NA	NA	False	AGTAAA	-10	NA	33463718	33192395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.82	chr11	-	3558	25	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	107	30720	3	-30720	5prime_fragment	FALSE	canonical	3	105	junction_11	31.3773792811885	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGATTGATGTTTCTAC	NA	False	NA	3	True	AATAAA	-23	NA	33463639	33192514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.84	chr11	-	3761	26	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-41	-30725	combination_of_known_junctions	FALSE	canonical	3	41	junction_12	45.3303606868509	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCACTACGATTGATGTT	NA	False	NA	-2	True	AATAAA	-18	NA	33463787	33192519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.85	chr11	-	3572	24	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-7	-30729	combination_of_known_splicesites	FALSE	canonical	3	45	junction_22	41.7037440577102	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCATCACTACGATTGA	NA	False	NA	-6	True	AATAAA	-14	NA	33463753	33192523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.86	chr11	-	3561	1	Intergenic	novelGene_3540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAAGTGGGTGTTTGA	3968	False	NA	NA	False	NA	NA	NA	33199637	33196076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33196100_33199600
ES.4592.87	chr11	-	1749	1	Intergenic	novelGene_3542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	33208588	33206839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33206800_33208600
ES.4592.88	chr11	-	3527	25	NNC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	-6	23776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	63.6164723601958	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTCTGCCTGTCATTC	NA	False	NA	NA	False	AATACA	-12	NA	33463752	33215787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33281660_33281934_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.89	chr11	-	3564	21	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-162	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	85.5015204543171	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTTATGGCTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	33463256	33246387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33267176_33267293_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463046
ES.4592.90	chr11	-	4350	14	ISM	ENSMUSG00000040594.20	ENSMUST00000129179.8	3364	21	28800	-6	28252	6	3prime_fragment	FALSE	canonical	1	9	junction_6	67.9099647593007	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTTATGGCTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	33434842	33246387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005
ES.4592.91	chr11	-	3328	20	ISM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	-16	84593	-16	6	5prime_fragment	FALSE	canonical	3	105	junction_6	31.5999053261319	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTTATGGCTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	33463762	33246387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.92	chr11	-	3328	20	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-16	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	51.8501997421071	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTTATGGCTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	33463762	33246387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268480_33278431_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.93	chr11	-	3237	19	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-16	6	combination_of_known_splicesites	FALSE	canonical	3	45	junction_17	44.9961589581561	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTTTTATGGCTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	33463762	33246387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.94	chr11	-	3249	20	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	28	2	combination_of_known_splicesites	FALSE	canonical	3	41	junction_7	57.8876072165025	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTGTTTTATGGC	NA	False	NA	NA	False	AATAAA	-30	NA	33463718	33246391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.95	chr11	-	3546	22	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_7	61.6674204770989	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTACTTGTTTTATGGC	NA	False	NA	NA	False	AATAAA	-30	NA	33463762	33246391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.96	chr11	-	3419	21	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	39	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	79.7033719487451	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACTTTAAAGCAAAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	33463707	33246404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33253918_33254011_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354037_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
ES.4592.97	chr11	-	3213	21	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	80.9380009637006	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACTTTAAAGCAAAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	33463648	33246404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33253918_33254011_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33354081_33354200_33391802_33391939_33402443_33402550_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.98	chr11	-	3352	21	NIC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	-19	-33	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	49.184245445061	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATATAAAAGAA	NA	False	NA	NA	False	AAGAAA	-33	NA	33463765	33246426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ES.4592.99	chr11	-	3213	21	NNC	ENSMUSG00000040594.20	novel	3364	21	NA	NA	5	-176	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	75.1867674527905	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTCTATGAGTCATCT	NA	False	NA	NA	False	AATAAA	-19	NA	33463741	33246569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33354081_33354200_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441394_33443250_33443418_33454681_33454829_33463601
ES.4593.1	chr11	+	178	1	Intergenic	novelGene_3554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33474267	33474445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33474300_33474400
ES.4594.1	chr11	+	1604	7	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	8.80183061767393	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAGACAGAAGTGTATA	NA	False	NA	NA	False	AATAAA	-15	NA	33484757	33524627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33517192_33517308_33522276_33522430_33522885_33523021_33523781_33524133_33524250
ES.4594.10	chr11	+	2852	7	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_5	7.29725975966321	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGCTTGTCCGTGGTTG	NA	False	NA	15	True	AATAAA	-26	NA	33484760	33525656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33517192_33517308_33522276_33522430_33522885_33523021_33523781
ES.4594.11	chr11	+	2974	10	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	8.35330939076111	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAAGCAGCGCTTGTCC	NA	False	NA	8	True	AATAAA	-19	NA	33484760	33525649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33505987_33506027_33509490_33509699_33517192_33517308_33522276_33522430_33522885_33523021_33523781_33524133_33524250
ES.4594.12	chr11	+	2287	9	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_8	8.54400374531753	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTAAAAGACCTGTC	NA	False	NA	NA	False	NA	NA	NA	33484760	33525420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33517192_33517308_33521595_33521643_33522276_33522430_33522885_33523021_33523781_33523801_33524176
ES.4594.13	chr11	+	2820	8	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	7.83503382902976	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGATTTTAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	33484760	33525416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33509490_33509699_33517192_33517308_33522276_33522430_33522885_33523021_33523781
ES.4594.14	chr11	+	2375	7	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	5.49747416749021	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGATTTTAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	33484760	33525416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33505356_33505461_33513648_33513781_33517192_33517308_33522276_33522430_33522885_33523021_33523781
ES.4594.15	chr11	+	2584	8	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	8.26104702560055	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCAGCGCTTGTCCG	NA	False	NA	9	True	AATAAA	-20	NA	33484761	33525650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33509490_33509699_33517192_33517308_33522276_33522430_33522885_33523021_33524250
ES.4594.16	chr11	+	175	1	Intergenic	novelGene_3565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTC	NA	False	NA	NA	False	NA	NA	NA	33494834	33495009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33494800_33495000
ES.4594.17	chr11	+	1291	1	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAAATAAGCGGGCTC	NA	False	NA	NA	False	NA	NA	NA	33512703	33513994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33512700_33514000
ES.4594.18	chr11	+	4338	4	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	5.73488351136175	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAGAAA	1831	False	NA	NA	False	NA	NA	NA	33514903	33525388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33517308_33522276_33522430_33522846_33523021_33523781
ES.4594.2	chr11	+	2730	8	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_5	7.12855711421408	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCAGCGCTTGTCCGTG	NA	False	NA	11	True	AATAAA	-22	NA	33484760	33525652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33517192_33517308_33522276_33522430_33522885_33523021_33523781_33524133_33524250
ES.4594.3	chr11	+	3809	7	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	8.43932593411478	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAAAAGCAGCGCT	NA	False	NA	3	True	AATAAA	-14	NA	33484760	33525644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33509490_33509699_33517192_33517308_33522276_33522430_33522885
ES.4594.4	chr11	+	3006	4	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	10.7082522694727	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGTTGTCTACATTTT	NA	False	NA	NA	False	NA	NA	NA	33484760	33508647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33506215
ES.4594.5	chr11	+	501	1	Intergenic	novelGene_3560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCGGGTGTGGTAACACA	NA	False	NA	NA	False	NA	NA	NA	33484760	33485261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_33484800_33485300
ES.4594.6	chr11	+	2972	8	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_4	8.74817765279706	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAAAAGCAGCGCT	NA	False	NA	3	True	AATAAA	-14	NA	33484760	33525644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33513648_33513781_33517192_33517308_33522276_33522430_33522885_33523021_33523781
ES.4594.7	chr11	+	4443	3	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	5	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGGTCCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	33484760	33509329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356
ES.4594.8	chr11	+	2711	9	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	7.47391296443837	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33484760	33525386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33509490_33509699_33517192_33517308_33522276_33522430_33522846_33523021_33523781_33524133_33524250
ES.4594.9	chr11	+	3056	8	Antisense	novelGene_ENSMUSG00000020159.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_6	7.83503382902976	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCAGCGCTTGTCCGTG	NA	False	NA	11	True	AATAAA	-22	NA	33484760	33525652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_33484862_33490951_33491321_33505356_33505461_33509490_33509699_33517192_33517308_33522276_33522430_33522885_33523021_33523781
ES.4595.1	chr11	-	2974	3	Intergenic	novelGene_3555	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAAGCATAGATGTTTA	NA	False	NA	NA	False	NA	NA	NA	33494388	33480723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33483454_33490994_33491103_33494252
ES.4595.2	chr11	-	2837	2	Intergenic	novelGene_3556	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCTCTGCAAAGCATAGA	NA	False	NA	NA	False	NA	NA	NA	33487247	33480729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33483454_33487134
ES.4595.3	chr11	-	2178	3	Intergenic	novelGene_3557	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAGAGATGGTTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	33494288	33481419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33483454_33490994_33491103_33494252
ES.4595.4	chr11	-	1435	2	Intergenic	novelGene_3558	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTATTAAAATATGTAAA	NA	False	NA	NA	False	AAAACA	-18	NA	33487242	33482126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33483454_33487134
ES.4595.5	chr11	-	982	2	Intergenic	novelGene_3559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATGGCATCATTATTTA	NA	False	NA	NA	False	AATACA	-20	NA	33487241	33482578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33483454_33487134
ES.4595.6	chr11	-	1462	4	Intergenic	novelGene_3561	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	6.16441400296898	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCGTGGTAGTCATCTG	NA	False	NA	0	True	AATAAA	-27	NA	33494285	33487358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33487917_33490994_33491316_33492017_33492568_33494252
ES.4595.7	chr11	-	1413	4	Intergenic	novelGene_3563	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	5.79271573232759	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGCTCAAAATCGTG	NA	False	NA	-11	True	AATAAA	-16	NA	33494460	33487369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33487917_33490994_33491103_33492017_33492568_33494252
ES.4595.8	chr11	-	688	3	Intergenic	novelGene_3562	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGCTCAAAATCGTG	NA	False	NA	-11	True	AATAAA	-16	NA	33494285	33487369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33487917_33490994_33491103_33494252
ES.4595.9	chr11	-	1094	3	Intergenic	novelGene_3564	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAGCTCATA	NA	False	NA	NA	False	AATAAA	-17	NA	33494298	33490920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33491316_33492017_33492671_33494252
ES.4596.1	chr11	-	2572	2	Intergenic	novelGene_3566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTGGAGAGCAATTGA	NA	False	NA	NA	False	NA	NA	NA	33500041	33497100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33499643_33500011
ES.4596.2	chr11	-	4459	1	Genic_Genomic	ENSMUSG00000020159.9	novel	NA	NA	NA	NA	27398	3680	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTGGAGAGCAATTGA	NA	False	NA	NA	False	NA	NA	NA	33501559	33497100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_33497100_33501600
ES.4596.3	chr11	-	3290	10	FSM	ENSMUSG00000020159.9	ENSMUST00000020366.8	3280	10	-3	-7	-1	7	multi-exon	FALSE	canonical	0	0	junction_2	0.831479419283098	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTGGTGACTGCAGAA	8482	False	NA	NA	False	AATAAA	-16	NA	33528960	33500773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_33502843_33504293_33504482_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372_33522492_33523317_33523417_33528805
ES.4596.4	chr11	-	1427	9	NNC	ENSMUSG00000020159.9	novel	3280	10	NA	NA	-16	-3315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.968245836551854	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTAGCAGGAAACTA	8467	False	NA	NA	False	NA	NA	NA	33528975	33504095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_33504482_33504967_33505121_33506936_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372_33522492_33523317_33523417_33528805
ES.4596.5	chr11	-	160	1	Intergenic	novelGene_3567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTAATAAATCTTTA	1456	False	NA	NA	False	NA	NA	NA	33512297	33512137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33512100_33512300
ES.4597.1	chr11	+	4138	4	NNC	ENSMUSG00000020155.3	novel	4191	4	NA	NA	-22770	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTCAAGTTCCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	33890242	33923641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_33890504_33914676_33914835_33916189_33916362_33920094
ES.4598.1	chr11	-	177	1	Intergenic	novelGene_3568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATGTGTTGTGTGTG	3462	False	NA	NA	False	NA	NA	NA	33989690	33989513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_33989500_33989700
ES.4599.1	chr11	+	3890	3	Antisense	novelGene_ENSMUSG00000020143.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTGGTTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	34178456	34207845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_34178512_34178640_34178787_34204156
ES.4599.2	chr11	+	3451	1	Antisense	novelGene_ENSMUSG00000020143.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	34187840	34191291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_34187800_34191300
ES.4599.3	chr11	+	177	1	Intergenic	novelGene_3569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAAAAAAGAAAGCCGT	NA	False	NA	NA	False	NA	NA	NA	34193986	34194163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34194000_34194200
ES.46.1	chr1	-	6395	2	Antisense	novelGene_ENSMUSG00000051285.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGCTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	7198466	7191769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_7194411_7194712
ES.46.2	chr1	-	5151	2	Antisense	novelGene_ENSMUSG00000051285.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTAGTTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	7200520	7194980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_7200019_7200407
ES.46.3	chr1	-	131	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	7200206	7200075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_7200100_7200200
ES.460.1	chr1	-	2636	1	Genic_Genomic	ENSMUSG00000101838.7	novel	NA	NA	NA	NA	-214	-13533	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATATTGAAAGCAGTTA	NA	False	NA	NA	False	NA	NA	NA	53381559	53378923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_53378900_53381600
ES.4600.1	chr11	-	5421	43	ISM	ENSMUSG00000020143.16	ENSMUST00000093193.12	6409	52	75049	12	-20364	-12	3prime_fragment	TRUE	canonical	0	0	junction_1	1.44671024104413	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCATCTTC	NA	False	NA	NA	False	AATAAA	-23	NA	34599670	34176826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_34177731_34178601_34178745_34179473_34179595_34180655_34180825_34181570_34181699_34182768_34182907_34188149_34188234_34189528_34189706_34197774_34197862_34198573_34198659_34199756_34199839_34204330_34204473_34206526_34206632_34208083_34208174_34211432_34211553_34212386_34212478_34216240_34216282_34217947_34218105_34223668_34223755_34232620_34232770_34244109_34244169_34244258_34244360_34250486_34250566_34260349_34260445_34262458_34262558_34388274_34388371_34414812_34414959_34451169_34451277_34453343_34453415_34464427_34464537_34578334_34578470_34579279_34579381_34580537_34580628_34582712_34582811_34583068_34583253_34586021_34586126_34586255_34586329_34589573_34589673_34595411_34595537_34596596_34596723_34597263_34597341_34598114_34598191_34599598
ES.4600.2	chr11	-	4188	35	ISM	ENSMUSG00000020143.16	ENSMUST00000093193.12	6409	52	91577	383	-3836	-383	3prime_fragment	FALSE	canonical	0	0	junction_1	1.5172023972387	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCTTGTTGCTGAGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	34583142	34177197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_34177731_34178601_34178745_34179473_34179595_34180655_34180825_34181570_34181699_34182768_34182907_34188149_34188234_34189528_34189706_34197774_34197862_34198573_34198659_34199756_34199839_34204330_34204473_34206526_34206632_34208083_34208174_34211432_34211553_34212386_34212478_34216240_34216282_34217947_34218105_34223668_34223755_34232620_34232770_34244109_34244169_34244258_34244360_34250486_34250566_34260349_34260445_34262458_34262558_34388274_34388371_34414812_34414959_34451169_34451277_34453343_34453415_34464427_34464537_34578334_34578470_34579279_34579381_34580537_34580628_34582712_34582811_34583068
ES.4600.3	chr11	-	3255	26	NNC	ENSMUSG00000020143.16	novel	6409	52	NA	NA	-107520	-386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.57480157480236	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAACCTTGTTGCTGAG	NA	False	NA	NA	False	ATTAAA	-16	NA	34370157	34177200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_34177731_34178601_34178745_34179473_34179595_34180655_34180825_34181570_34181699_34182768_34182907_34188149_34188234_34189528_34189706_34197774_34197862_34198573_34198659_34199756_34199839_34204330_34204473_34206526_34206632_34208083_34208174_34211432_34211553_34212386_34212478_34216240_34216282_34217947_34218105_34223668_34223755_34232620_34232770_34244109_34244169_34244258_34244360_34250486_34250566_34260349_34260445_34262458_34262558_34370060
ES.4600.4	chr11	-	4162	37	NNC	ENSMUSG00000020143.16	novel	6409	52	NA	NA	665	10960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.2104865871945	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTTTCCGTGTCTA	9692	False	NA	NA	False	GATAAA	-17	NA	34674045	34212084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_34212478_34216240_34216282_34217947_34218105_34223668_34223755_34232620_34232770_34244109_34244169_34244258_34244360_34250486_34250566_34260349_34260445_34262458_34262558_34388274_34388371_34414812_34414959_34451169_34451277_34453343_34453415_34464427_34464537_34578334_34578470_34579279_34579381_34580537_34580628_34582712_34582811_34583068_34583253_34586021_34586126_34586255_34586329_34589573_34589673_34595411_34595537_34596596_34596723_34597263_34597341_34598114_34598191_34599598_34599735_34605274_34605357_34609677_34609833_34611755_34611892_34618144_34618294_34622316_34622414_34623167_34623224_34624257_34624299_34647025_34647110_34673895
ES.4600.5	chr11	-	1471	13	ISM	ENSMUSG00000020143.16	ENSMUST00000154178.2	3819	27	27652	207918	27652	-207918	internal_fragment	FALSE	canonical	0	0	junction_3	1.25830573921179	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTCTTCAATGTATAC	NA	False	NA	NA	False	NA	NA	NA	34647058	34595229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_34595537_34596596_34596723_34597263_34597341_34598114_34598191_34599598_34599735_34605274_34605357_34609677_34609833_34611755_34611892_34618144_34618294_34622316_34622414_34623167_34623224_34624257_34624299_34647025
ES.4601.1	chr11	-	2708	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-8	-195	-8	195	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTAAAGTGATAGAT	NA	False	NA	NA	False	AGTAAA	-28	NA	34724476	34699821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.10	chr11	-	5092	9	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	139	junction_6	18.5232117895359	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTATTTGTATTTTTTA	NA	False	NA	-9	True	AATAAA	-13	NA	34724438	34700018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_34700670_34704152_34704502_34709949_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.11	chr11	-	2279	11	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-10	-95	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	52.2815455012569	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTGAAGTACCTATA	NA	False	NA	-102	True	AATATA	-19	NA	34724478	34700111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.12	chr11	-	2357	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	50	98	1	-98	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTGTGAAGTACCT	NA	False	NA	-105	True	AATATA	-16	NA	34724418	34700114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.13	chr11	-	4558	10	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-1	-100	intron_retention	FALSE	canonical	3	139	junction_7	18.443775088256	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAAAGTGTGAAGTAC	NA	False	NA	-107	True	AATATA	-14	NA	34724469	34700116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.15	chr11	-	4083	2	ISM	ENSMUSG00000069910.3	ENSMUST00000148853.2	1118	4	1060	-3314	1060	3314	intron_retention	FALSE	canonical	3	164	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGCATCTCAGGGTGTT	5249	False	NA	NA	False	NA	NA	NA	34713718	34709553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_34713119_34713200
ES.4601.16	chr11	-	4101	1	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	1124	3314	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGCATCTCAGGGTGTT	5313	False	NA	NA	False	NA	NA	NA	34713654	34709553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_34709600_34713700
ES.4601.17	chr11	-	1869	10	ISM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-10	9577	-10	3274	5prime_fragment	FALSE	canonical	3	139	junction_7	18.5199258724485	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34724478	34709593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.2	chr11	-	2530	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	-19	-6	-19	6	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTTTAATTCTACA	NA	False	NA	-1	True	AATAAA	-21	NA	34724487	34700010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.5	chr11	-	5048	11	NNC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-2	3	intron_retention	FALSE	canonical	1	4	junction_9	51.1821257862547	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATTTTTTAATTCT	NA	False	NA	-4	True	AATAAA	-18	NA	34724470	34700013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34716367_34720848_34721727_34724314
ES.4601.7	chr11	-	4019	1	Genic_Genomic	ENSMUSG00000069910.3	novel	NA	NA	NA	NA	10744	1	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATTTTTTAATT	7897	False	NA	-6	True	AATAAA	-16	NA	34704034	34700015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_34700000_34704000
ES.4601.8	chr11	-	3630	11	NIC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-24	0	intron_retention	FALSE	canonical	3	139	junction_8	18.8332153388634	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	34724443	34700016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ES.4601.9	chr11	-	3219	12	NNC	ENSMUSG00000069910.3	novel	2505	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	48.8899928917839	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	34724479	34700016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34720848_34721727_34724314
ES.4602.1	chr11	+	2617	1	Intergenic	novelGene_3570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTTGTGGTTTTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	34724589	34727206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34724600_34727200
ES.4602.2	chr11	+	174	1	Intergenic	novelGene_3571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATTCATATGAC	NA	False	NA	NA	False	NA	NA	NA	34726540	34726714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34726500_34726700
ES.4603.1	chr11	+	160	1	Intergenic	novelGene_3572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34931816	34931976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34931800_34932000
ES.4604.1	chr11	+	178	1	Intergenic	novelGene_3573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAACTAGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34939051	34939229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34939100_34939200
ES.4605.1	chr11	+	2767	1	Intergenic	novelGene_3574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCATATTGTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	34974446	34977213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_34974400_34977200
ES.4606.1	chr11	+	4608	32	NNC	ENSMUSG00000056427.11	novel	1218	9	NA	NA	-155209	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.95544436672164	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAAGGATAAGGGTAG	NA	False	NA	NA	False	AATAAA	-9	NA	35280302	35599326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35280493_35399049_35399122_35435555_35435628_35455451_35455524_35461394_35461559_35469792_35469935_35479759_35479832_35485788_35485861_35490242_35490315_35501418_35501563_35503099_35503264_35512834_35512986_35514267_35514343_35520549_35520694_35521669_35521814_35523538_35523703_35524728_35524862_35539859_35539929_35541926_35541999_35542574_35542647_35550165_35550238_35552012_35552177_35554888_35555014_35566671_35566812_35570228_35570323_35574863_35575002_35577082_35577324_35579379_35579511_35589132_35589288_35591030_35591317_35593938_35594148_35598733
ES.4606.2	chr11	+	7232	6	NNC	ENSMUSG00000056427.11	novel	1218	9	NA	NA	-99926	-26961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.22710574513201	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35335585	35476502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35335728_35399049_35399122_35435555_35435628_35455451_35455524_35461394_35461559_35469792
ES.4606.3	chr11	+	2508	1	Intergenic	novelGene_3575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGGAGTTCTCTGTAG	NA	False	NA	NA	False	NA	NA	NA	35372016	35374524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35372000_35374500
ES.4606.4	chr11	+	4735	1	Intergenic	novelGene_3576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35374534	35379269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35374500_35379300
ES.4606.5	chr11	+	7229	4	ISM	ENSMUSG00000056427.11	ENSMUST00000124438.2	1218	9	-143	26937	-143	-26937	5prime_fragment	FALSE	canonical	1	4	junction_3	0.816496580927726	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAGGAGGAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	35435368	35476526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_35435628_35455451_35455524_35461394_35461559_35469792
ES.4606.6	chr11	+	4575	31	ISM	ENSMUSG00000056427.11	ENSMUST00000069837.4	5228	36	423382	0	-79	0	3prime_fragment	FALSE	canonical	1	2	junction_11	2.50532765654847	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAGGGTAGAGAAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	35435432	35599334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_35435628_35455451_35455524_35461394_35461559_35469792_35469935_35479759_35479832_35485788_35485861_35490242_35490315_35501418_35501563_35503099_35503264_35512834_35512986_35514267_35514343_35520549_35520694_35521669_35521814_35523538_35523703_35524728_35524862_35539859_35539929_35541926_35541999_35542574_35542647_35550165_35550238_35552012_35552177_35554888_35555014_35560900_35560999_35566671_35566812_35570228_35570323_35574863_35575002_35577082_35577324_35579379_35579511_35589132_35589288_35591030_35591317_35593938_35594148_35598733
ES.4606.7	chr11	+	4361	31	ISM	ENSMUSG00000056427.11	ENSMUST00000069837.4	5228	36	423414	182	-47	-182	3prime_fragment	FALSE	canonical	1	2	junction_11	2.50532765654847	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTATTTTCATCTT	NA	False	NA	NA	False	AATAAA	-28	NA	35435464	35599152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_35435628_35455451_35455524_35461394_35461559_35469792_35469935_35479759_35479832_35485788_35485861_35490242_35490315_35501418_35501563_35503099_35503264_35512834_35512986_35514267_35514343_35520549_35520694_35521669_35521814_35523538_35523703_35524728_35524862_35539859_35539929_35541926_35541999_35542574_35542647_35550165_35550238_35552012_35552177_35554888_35555014_35560900_35560999_35566671_35566812_35570228_35570323_35574863_35575002_35577082_35577324_35579379_35579511_35589132_35589288_35591030_35591317_35593938_35594148_35598733
ES.4606.8	chr11	+	1973	1	FSM	ENSMUSG00000065583.3	ENSMUST00000083649.3	110	1	89	-1952	89	1952	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	35507731	35509704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_35507700_35509700
ES.4607.1	chr11	-	159	1	Intergenic	novelGene_3577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAAATCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	35474367	35474208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_35474200_35474400
ES.4608.1	chr11	-	2326	1	Antisense	novelGene_ENSMUSG00000056427.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	35553120	35550794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_35550800_35553100
ES.4609.1	chr11	-	106	2	Intergenic	novelGene_3578	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	35610609	35610269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_35610298_35610531
ES.461.1	chr1	-	2405	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	37	0	37	0	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	False	NA	-2	True	AATAAA	-41	NA	53391874	53383775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ES.461.2	chr1	-	3997	5	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	41	0	41	0	intron_retention	FALSE	canonical	3	502	junction_1	31.9139467944659	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	False	NA	-2	True	AATAAA	-41	NA	53391870	53383775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038
ES.461.3	chr1	-	2321	6	NNC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	50	7	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	231.068820917059	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTAGTAGTTTCACATT	NA	False	NA	-23	True	AATAAA	-20	NA	53391861	53383796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53384089_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ES.461.4	chr1	-	1103	7	NNC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.968390708119	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTGTAGTAGTTTCA	NA	False	NA	-27	True	AATAAA	-16	NA	53391870	53383800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53384139_53385738_53385921_53386173_53386332_53387604_53387718_53389145_53389222_53390038_53390093_53391688
ES.461.5	chr1	-	888	6	FSM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	96	-1	-86	1	multi-exon	TRUE	canonical	3	13	junction_2	221.433872747599	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGGTGTAGTAGTTT	NA	False	NA	-29	True	AATAAA	-14	NA	53391815	53383802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53384139_53385738_53385921_53387604_53387718_53389145_53389222_53390038_53390093_53391688
ES.461.6	chr1	-	3390	4	NIC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	-87	1	intron_retention	FALSE	canonical	3	502	junction_1	55.8231333966683	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGGTGTAGTAGTTT	NA	False	NA	-29	True	AATAAA	-14	NA	53391816	53383802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53384139_53385738_53387718_53389145_53390093_53391688
ES.461.7	chr1	-	2618	5	NIC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	50	1	intron_retention	FALSE	canonical	3	502	junction_1	48.7410248148313	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGGTGTAGTAGTTT	NA	False	NA	-29	True	AATAAA	-14	NA	53391861	53383802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53384139_53385738_53387718_53389145_53389222_53390038_53390093_53391688
ES.461.8	chr1	-	538	4	FSM	ENSMUSG00000117809.2	ENSMUST00000236737.2	300	4	-92	-146	-92	146	multi-exon	FALSE	canonical	3	541	junction_1	43.3999487966928	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTTATTTTCTGGTC	NA	False	NA	NA	False	NA	NA	NA	53391870	53387491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53387718_53389145_53389222_53390038_53390093_53391688
ES.4610.1	chr11	+	157	1	Intergenic	novelGene_3579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	35626830	35626987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35626800_35627000
ES.4611.1	chr11	+	204	1	Intergenic	novelGene_3580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTCTGAAGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	35649085	35649289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35649100_35649300
ES.4612.1	chr11	+	7095	7	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	-112	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.5187374031961	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTCCTGCTTGTTTC	NA	False	NA	14	True	AATAAA	-16	NA	35660198	35682111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660775_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.10	chr11	+	6899	6	NIC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	122	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.5808693171718	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35660432	35682110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_35660775_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ES.4612.11	chr11	+	7120	9	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	127	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.1918589882248	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTCTCCTGCTTGTT	NA	False	NA	12	True	AATAAA	-14	NA	35660437	35682109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660624_35660710_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.12	chr11	+	6483	8	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	129	-725	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.3173356178983	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATAAACCCTTAGAGTT	NA	False	NA	NA	False	NA	NA	NA	35660439	35681387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.13	chr11	+	4059	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	132	3185	132	-3185	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGCAGTTTATTTTA	NA	False	NA	NA	False	AGTAAA	-13	NA	35660442	35678927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ES.4612.14	chr11	+	3689	7	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	6677	-3109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	33.7326086878689	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTATATGGGATTTT	NA	False	NA	NA	False	NA	NA	NA	35666987	35679003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.15	chr11	+	6312	5	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	9254	208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.170016581244	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAACGTGCCCTTACAT	NA	False	NA	NA	False	NA	NA	NA	35669564	35682320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.16	chr11	+	5762	2	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	15997	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCCTGCTTGTTTCA	NA	False	NA	15	True	AATAAA	-17	NA	35676307	35682112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35678864_35678906
ES.4612.3	chr11	+	7455	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	-81	2	-81	-2	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTCCTGCTTGTTT	NA	False	NA	13	True	AATAAA	-15	NA	35660229	35682110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ES.4612.4	chr11	+	2199	1	Genic_Genomic	ENSMUSG00000018846.9	novel	NA	NA	NA	NA	-15	-19618	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCACTTTTATCATCTAA	NA	False	NA	NA	False	NA	NA	NA	35660295	35662494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_35660300_35662500
ES.4612.5	chr11	+	1714	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	94	5568	94	-5568	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGATTTTCTATTTAT	NA	False	NA	NA	False	AATACA	-23	NA	35660404	35676544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ES.4612.6	chr11	+	2502	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	98	4776	98	-4776	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATTTGTCTTTCTGCTT	NA	False	NA	NA	False	CATAAA	-14	NA	35660408	35677336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ES.4612.7	chr11	+	7238	8	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	98	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.3173356178983	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTCTCCTGCTTGTTTC	NA	False	NA	14	True	AATAAA	-16	NA	35660408	35682111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.8	chr11	+	4956	8	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	109	-2272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	31.3173356178983	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTTTGTGGTGTGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	35660419	35679840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35678873_35678911
ES.4612.9	chr11	+	6110	9	NNC	ENSMUSG00000018846.9	novel	7376	7	NA	NA	109	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	37.1918589882248	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTACATGTGTCTCCTGC	NA	False	NA	7	True	AATAAA	-9	NA	35660419	35682104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234_35677639_35678748_35678873_35678911
ES.4613.1	chr11	-	2143	16	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	9	3574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	242.348564399847	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAACTAAGGAACTCCA	NA	False	NA	NA	False	NA	NA	NA	35725324	35695633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35695671_35699201_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ES.4613.10	chr11	-	2197	16	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	4	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	319.864443510407	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725329	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723397_35723491_35723998_35724134_35725263
ES.4613.12	chr11	-	2127	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.255668666973	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725365	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35699419_35699929_35700170_35700459_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ES.4613.17	chr11	-	2606	14	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	825	junction_10	68.2380969094426	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGGTGTGTTTCTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	35725329	35699209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ES.4613.19	chr11	-	4844	15	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_8	392.622949675952	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGGTGTGTTTCTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	35725329	35699209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35713319_35713572_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35720972_35723998_35724134_35725263
ES.4613.2	chr11	-	2273	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	-90	-74	-90	74	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGAGAGCGTGTTTG	NA	False	NA	73	True	CATAAA	-13	NA	35725423	35699133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ES.4613.20	chr11	-	3624	13	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	9	-2	intron_retention	FALSE	canonical	3	825	junction_10	74.2994597707293	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGGTGTGTTTCTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	35725324	35699209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35717405_35718184_35719641_35723998_35724134_35725263
ES.4613.4	chr11	-	7127	8	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	714	-1	intron_retention	FALSE	canonical	0	0	junction_6	335.946728041266	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35715246	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35699419_35699921_35700170_35700454_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711918_35712053_35715222
ES.4613.5	chr11	-	2161	16	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	322.848667679181	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725324	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35720909_35720972_35723998_35724134_35725263
ES.4613.6	chr11	-	6078	8	ISM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	8464	1	-909	-1	intron_retention	FALSE	canonical	3	858	junction_4	65.8981898732539	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35716869	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922
ES.4613.7	chr11	-	3108	13	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_10	270.506880175389	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725325	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35719451_35719641_35723998_35724134_35725263
ES.4613.8	chr11	-	2299	16	NNC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	323.01475714483	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCAGGTGTGTTTCTTTG	NA	False	NA	-2	True	AGTAAA	-16	NA	35725329	35699208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723081_35723277_35723998_35724134_35725263
ES.4614.1	chr11	+	2228	1	Intergenic	novelGene_3581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-15	NA	35768072	35770300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35768100_35770300
ES.4615.1	chr11	+	175	1	Intergenic	novelGene_3582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGTCAGTA	7398	False	NA	NA	False	NA	NA	NA	35777242	35777417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_35777200_35777400
ES.4616.1	chr11	-	6170	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-17	1	intron_retention	FALSE	canonical	3	205	junction_15	29.9133290731043	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCATTTGTCCCT	8100	False	NA	NA	False	AATAAA	-19	NA	35871371	35729225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.10	chr11	-	5884	22	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	237	-1	intron_retention	FALSE	canonical	3	18	junction_15	57.7616495891981	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8354	False	NA	NA	False	AATAAA	-17	NA	35871117	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.11	chr11	-	4563	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	56.5216991901238	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8054	False	NA	NA	False	AATAAA	-17	NA	35871417	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.14	chr11	-	4362	24	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	76.3703047031612	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8118	False	NA	NA	False	AATAAA	-17	NA	35871353	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766579_35766738_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801009_35801207_35806002_35806113_35870797
ES.4616.15	chr11	-	4326	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	61.7336830186538	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8117	False	NA	NA	False	AATAAA	-17	NA	35871354	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35806002_35806113_35870797
ES.4616.17	chr11	-	4393	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	60.2696420436202	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8112	False	NA	NA	False	AATAAA	-17	NA	35871359	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766838_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.18	chr11	-	3383	14	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-7634	-1	intron_retention	FALSE	canonical	3	217	junction_13	30.3679603818149	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	35774173	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35767446_35774074
ES.4616.2	chr11	-	4702	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-170	-1	-170	1	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCATTTGTCCCT	7947	False	NA	NA	False	AATAAA	-19	NA	35871524	35729225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.20	chr11	-	3428	18	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-13654	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	86.2989092057588	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	35780193	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35735526_35735623_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086
ES.4616.21	chr11	-	4528	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	59.7764603051366	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCTTGTCATTTGTCC	8112	False	NA	NA	False	AATAAA	-17	NA	35871359	35729227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801009_35801207_35806002_35806113_35870797
ES.4616.22	chr11	-	4440	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	60.3200828637877	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCTTGTCATTTGTC	8118	False	NA	NA	False	AATAAA	-16	NA	35871353	35729228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801090_35801207_35806002_35806113_35870797
ES.4616.23	chr11	-	6501	21	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	18	-2	intron_retention	FALSE	canonical	2	3	junction_18	62.5685823716664	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCTTGTCATTTGTC	8135	False	NA	NA	False	AATAAA	-16	NA	35871336	35729228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801009_35801207_35806002_35806113_35870797
ES.4616.24	chr11	-	4693	24	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	76.811014490566	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTCTTGTCATTTGTC	8118	False	NA	NA	False	AATAAA	-16	NA	35871353	35729228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35786435_35786601_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.26	chr11	-	4731	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-46	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.3200828637877	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCTTCTTGTCATTTG	8071	False	NA	NA	False	AATAAA	-14	NA	35871400	35729230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759765_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.28	chr11	-	4385	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	32	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	60.9943679791017	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCTTCTTGTCATTTG	8149	False	NA	NA	False	AATAAA	-14	NA	35871322	35729230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35870797
ES.4616.29	chr11	-	4384	22	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	41	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	91.3895253925412	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCTTCTTGTCATTTG	8158	False	NA	NA	False	AATAAA	-14	NA	35871313	35729230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758250_35759923_35760025_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.3	chr11	-	4413	22	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.6879623953015	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGTCATTTGTCCCT	8119	False	NA	NA	False	AATAAA	-19	NA	35871352	35729225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.30	chr11	-	1305	4	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	11294	-6	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	143.815468183672	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAGCTTCTTGTCATT	NA	False	NA	NA	False	AATAAA	-12	NA	35733087	35729232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35732977
ES.4616.31	chr11	-	4509	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.184032505267	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	8117	False	NA	NA	False	AATAAA	-11	NA	35871354	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732800_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.33	chr11	-	1041	3	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	12639	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	154	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35731742	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35731661
ES.4616.35	chr11	-	3010	14	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	74.2382220252307	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	8118	False	NA	NA	False	AATAAA	-11	NA	35871353	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766610_35870785
ES.4616.39	chr11	-	4379	4	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	133188	7	6215	-7	3prime_fragment	FALSE	canonical	3	260	junction_3	24.7296493213219	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35738166	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981
ES.4616.4	chr11	-	6161	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	39	0	intron_retention	FALSE	canonical	3	205	junction_15	30.3097388987243	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8156	False	NA	NA	False	AATAAA	-18	NA	35871315	35729226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.40	chr11	-	1347	4	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	11296	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	147.114467903965	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35733085	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35732932
ES.4616.41	chr11	-	4571	24	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	45	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	76.8182004268793	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	8162	False	NA	NA	False	AATAAA	-11	NA	35871309	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35788530_35788623_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.42	chr11	-	1309	5	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	9175	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	128.952268301104	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35735206	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35735184
ES.4616.43	chr11	-	3079	18	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-15850	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	67.7000304109759	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	False	NA	NA	False	AATAAA	-11	NA	35782389	35729233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766579_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275
ES.4616.45	chr11	-	4302	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-17	246	-17	-246	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTGGGGGAATTCGAAG	8100	False	NA	NA	False	AATACA	-19	NA	35871371	35729472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.46	chr11	-	4118	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-17	430	-17	-430	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTAGAGTTTTCTTTTT	8100	False	NA	NA	False	ACTAAA	-30	NA	35871371	35729656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.47	chr11	-	3892	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	43	596	43	-596	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATGACAAAGC	8160	False	NA	NA	False	TTTAAA	-25	NA	35871311	35729822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.48	chr11	-	3089	18	NNC	ENSMUSG00000018849.7	novel	728	4	NA	NA	0	-6912	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.1274319480831	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACAGCCCAGTTCTTCT	8117	False	NA	NA	False	ATTAAA	-19	NA	35871354	35749933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35750069_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.49	chr11	-	3719	17	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-5	-7350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.283516296229	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGCTCTACTATAGATT	8112	False	NA	NA	False	NA	NA	NA	35871359	35750371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35751224_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.5	chr11	-	5578	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	76	0	intron_retention	FALSE	canonical	3	217	junction_14	28.4799328644525	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8193	False	NA	NA	False	AATAAA	-18	NA	35871278	35729226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.50	chr11	-	3299	15	NNC	ENSMUSG00000018849.7	novel	728	4	NA	NA	1	748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.3914677218062	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAACCTGTGAAGACTG	8118	False	NA	NA	False	AATAAA	-20	NA	35871353	35758823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35759596_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.51	chr11	-	3597	14	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-5	29633	-5	712	5prime_fragment	FALSE	canonical	3	205	junction_7	25.9610541265363	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAATAAACAA	8112	False	NA	NA	False	NA	NA	NA	35871359	35758859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.52	chr11	-	3189	14	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	207	29829	207	516	5prime_fragment	FALSE	canonical	3	205	junction_7	25.9610541265363	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGGGTAAAGTGTTTG	8324	False	NA	NA	False	AATAAA	-21	NA	35871147	35759055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.53	chr11	-	2904	11	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-19	36580	-19	-6235	5prime_fragment	FALSE	canonical	3	205	junction_4	28.4154887341393	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAGAAAAGAAAAAACG	8098	False	NA	NA	False	NA	NA	NA	35871373	35765806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.54	chr11	-	3240	10	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-5	-6261	intron_retention	FALSE	canonical	3	205	junction_3	29.3930368843362	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	8112	False	NA	NA	False	NA	NA	NA	35871359	35765832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.55	chr11	-	4422	9	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-69	-6266	intron_retention	FALSE	canonical	3	217	junction_1	26.8560980039916	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATACAAAAAAAAAAAAA	8048	False	NA	NA	False	NA	NA	NA	35871423	35765837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35767446_35774074_35774318_35778889_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.56	chr11	-	2416	9	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	-5	-17862	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	86.2509963710565	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTTTTTAAAGA	8112	False	NA	NA	False	AATAAA	-7	NA	35871359	35777433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35778466_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.57	chr11	-	3586	1	Intergenic	novelGene_3583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAAAGTTGA	546	False	NA	NA	False	NA	NA	NA	35798143	35794557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_35794600_35798100
ES.4616.58	chr11	-	2963	3	ISM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	-73	69757	-73	-39412	5prime_fragment	FALSE	canonical	3	237	junction_1	23.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAAGACTTGCCTTGG	8044	False	NA	NA	False	NA	NA	NA	35871427	35798983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_35801207_35806002_35806113_35870797
ES.4616.6	chr11	-	6573	22	NIC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	205	junction_16	28.3890209048588	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8117	False	NA	NA	False	AATAAA	-18	NA	35871354	35729226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4616.7	chr11	-	4740	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.3200828637877	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8118	False	NA	NA	False	AATAAA	-18	NA	35871353	35729226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759713_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ES.4617.1	chr11	-	3712	1	NIC	ENSMUSG00000049336.17	novel	9908	31	NA	NA	373769	-46761	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATTGTGTGTTGTGGATA	NA	False	NA	NA	False	AATACA	-17	NA	35949334	35945622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_35945600_35949300
ES.4618.1	chr11	-	157	1	Intergenic	novelGene_3584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7078	False	NA	NA	False	NA	NA	NA	35973521	35973364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_35973400_35973500
ES.4619.1	chr11	+	224	1	Intergenic	novelGene_3585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGAAAGATATATACAA	NA	False	NA	NA	False	NA	NA	NA	36050118	36050342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_36050100_36050300
ES.462.1	chr1	+	175	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAATGATGGT	NA	False	NA	NA	False	NA	NA	NA	53461860	53462035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_53461900_53462000
ES.4620.1	chr11	-	205	1	Intergenic	novelGene_3586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	36257595	36257390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_36257400_36257600
ES.4621.1	chr11	-	154	1	Intergenic	novelGene_3587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	36615763	36615609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_36615600_36615800
ES.4622.1	chr11	+	181	1	Intergenic	novelGene_3588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAAATGTTGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	36946303	36946484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_36946300_36946500
ES.4623.1	chr11	+	155	1	Intergenic	novelGene_3589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	37168782	37168937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_37168800_37168900
ES.4624.1	chr11	+	155	1	Intergenic	novelGene_3590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37654215	37654370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_37654200_37654400
ES.4625.1	chr11	-	202	1	Intergenic	novelGene_3591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCTGCAAAGCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	37763745	37763543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_37763500_37763700
ES.4626.1	chr11	-	177	1	Intergenic	novelGene_3592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	38233012	38232835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_38232800_38233000
ES.4627.1	chr11	+	178	1	Intergenic	novelGene_3593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATATATATGC	NA	False	NA	NA	False	NA	NA	NA	39606344	39606522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_39606300_39606500
ES.4628.1	chr11	-	3995	2	Antisense	novelGene_ENSMUSG00000085301.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	39961029	39954627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_39957976_39960382
ES.4629.1	chr11	-	1363	1	FSM	ENSMUSG00000082087.5	ENSMUST00000122180.2	951	1	-38	-374	-38	374	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGATGAGTAGATATGCA	5818	False	NA	NA	False	AATAAA	-27	NA	40564721	40563358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40563400_40564700
ES.463.1	chr1	-	5013	27	NNC	ENSMUSG00000096141.3	novel	12245	66	NA	NA	-44548	-143432	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.02916062771228	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAAGTTGTATTATTTA	957	False	NA	NA	False	NA	NA	NA	53790491	53579596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53580287_53586301_53586515_53598198_53598327_53598437_53598541_53601060_53601230_53604821_53604932_53606193_53606407_53616437_53616489_53621652_53621852_53623616_53623811_53644956_53645144_53656883_53657570_53659801_53659949_53662501_53662727_53666192_53666272_53669353_53669482_53670624_53670898_53674422_53674603_53675152_53675337_53679494_53679615_53682599_53682726_53686405_53686482_53701486_53701668_53702962_53703051_53737790_53737854_53741176_53741240_53790354
ES.463.2	chr1	-	4793	28	NNC	ENSMUSG00000096141.3	novel	12245	66	NA	NA	-44581	-143874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.01835015443463	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTGTGCTATTAATAC	924	False	NA	NA	False	ATTAAA	-16	NA	53790524	53580038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53580287_53583586_53583686_53586301_53586515_53598198_53598327_53598437_53598541_53601060_53601230_53604821_53604932_53606193_53606407_53616347_53616489_53621652_53621852_53623616_53623811_53644956_53645144_53656883_53657570_53659801_53659949_53662501_53662727_53666192_53666272_53669353_53669482_53670624_53670898_53674422_53674603_53675152_53675337_53679494_53679615_53682599_53682726_53686405_53686482_53701486_53701668_53702962_53703051_53737790_53737854_53741176_53741240_53790354
ES.463.3	chr1	-	4302	23	NIC	ENSMUSG00000096141.3	novel	12245	66	NA	NA	20158	-149983	intron_retention	FALSE	canonical	0	0	junction_1	0.828221234467664	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATACAGGTAATGCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	53725762	53586147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53586515_53598198_53598327_53598437_53598541_53601060_53601230_53604821_53604932_53606193_53606407_53621652_53621852_53623616_53623811_53644956_53645144_53656883_53657570_53659801_53659949_53662501_53662727_53666192_53666272_53669353_53669482_53670624_53670898_53675152_53675337_53679494_53679615_53682599_53682726_53686405_53686482_53701486_53701668_53702962_53703051_53723999_53724214_53725657
ES.463.4	chr1	-	3600	4	NNC	ENSMUSG00000096141.3	novel	12245	66	NA	NA	-44593	5356	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.88561808316413	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTCGGTCTCCGCGTCT	912	False	NA	NA	False	NA	NA	NA	53790536	53731832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53735125_53737790_53737854_53741176_53741240_53790354
ES.4630.1	chr11	-	3618	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	293	-1858	77	1858	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAGACTTGAAGCATCT	NA	False	NA	NA	False	AATAAA	-13	NA	40585737	40568282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ES.4630.10	chr11	-	1763	7	NIC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	44	-2	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	204.398032171436	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCTTTATTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	40585770	40570142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40585629
ES.4630.12	chr11	-	1917	8	NNC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	250.632261714738	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCTTTATTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	40583438	40570142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40578850_40578984_40583304
ES.4630.13	chr11	-	3461	6	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	27	-2	intron_retention	FALSE	canonical	3	244	junction_5	130.391103991032	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCTTTATTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	40583421	40570142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40571482_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ES.4630.16	chr11	-	4063	6	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	-9	-8	intron_retention	FALSE	canonical	3	244	junction_5	131.001679378548	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTAACACTTTGGCTTT	NA	False	NA	-20	True	AATAAA	-10	NA	40583464	40570148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40578623_40583304
ES.4630.17	chr11	-	1182	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	139	628	-7	-628	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTTAATTGTGACACAT	NA	False	NA	NA	False	AATAAA	-21	NA	40583462	40570768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ES.4630.18	chr11	-	1241	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	184	628	-32	-628	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTTAATTGTGACACAT	NA	False	NA	NA	False	AATAAA	-21	NA	40585846	40570768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ES.4630.2	chr11	-	2851	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	263	-1061	47	1061	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTCTAAGTTTGGGT	NA	False	NA	NA	False	NA	NA	NA	40585767	40569079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ES.4630.3	chr11	-	1986	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	73	-6	73	6	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTATTTTGTATTTGCT	NA	False	NA	-6	True	AATAAA	-24	NA	40585957	40570134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ES.4630.4	chr11	-	4092	6	NIC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	6	2	intron_retention	FALSE	canonical	3	348	junction_5	90.9250240582866	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTTTATTTTGTATT	NA	False	NA	-10	True	AATAAA	-20	NA	40585808	40570138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40578623_40585629
ES.4630.5	chr11	-	3917	5	NIC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	47	0	intron_retention	FALSE	canonical	3	19	junction_3	229.110235476288	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40585767	40570140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40585629
ES.4630.6	chr11	-	1854	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	94	1	-52	-1	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40583507	40570141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ES.4630.7	chr11	-	3456	6	NIC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	46	-1	intron_retention	FALSE	canonical	3	19	junction_4	218.981825729899	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGCTTTATTTTGT	NA	False	NA	-13	True	AATAAA	-17	NA	40585768	40570141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40571482_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40585629
ES.4630.8	chr11	-	1572	4	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	245	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	269.830811188542	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCTTTATTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	40576399	40570142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40571022_40573290_40573485_40575508_40575662_40576053
ES.4630.9	chr11	-	1820	8	NNC	ENSMUSG00000042032.14	novel	2053	7	NA	NA	151	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	248.833113486423	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTGGCTTTATTTTG	NA	False	NA	-14	True	AATAAA	-16	NA	40585663	40570142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40578850_40578987_40585629
ES.4631.1	chr11	+	205	1	Intergenic	novelGene_3594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTCTAAGCTTGAAATG	NA	False	NA	NA	False	AAAAAG	-7	NA	40594038	40594243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_40594000_40594200
ES.4632.1	chr11	+	3907	1	Antisense	novelGene_ENSMUSG00000020330.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCATGGCATTCAAG	NA	False	NA	NA	False	NA	NA	NA	40594448	40598355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_40594400_40598400
ES.4633.1	chr11	+	3497	2	FSM	ENSMUSG00000020328.11	ENSMUST00000144601.2	445	2	-2687	-365	-48	79	multi-exon	FALSE	canonical	3	1147	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTTGTCTAAATATGCT	NA	False	NA	27	True	AGTAAA	-21	NA	40624445	40630456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40627472_40629985
ES.4633.11	chr11	+	1696	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-558	-561	-20	-2	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624473	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
ES.4633.13	chr11	+	1275	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-554	-144	-16	77	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTTTGTCTAAATATG	NA	False	NA	25	True	AGTAAA	-19	NA	40624477	40630454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
ES.4633.14	chr11	+	2511	1	Genic_Genomic	ENSMUSG00000020328.11	novel	NA	NA	NA	NA	-9	-244	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTGAGAGCAATTGTCT	NA	False	NA	11	True	NA	NA	NA	40624484	40626995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_40624500_40627000
ES.4633.15	chr11	+	3449	3	NIC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	1122	junction_1	12.5	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624484	40630873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_40626894_40627319_40627472_40629985
ES.4633.16	chr11	+	1090	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-287	-76	-8	76	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCCTTTGTCTAAATAT	NA	False	NA	24	True	AGTAAA	-18	NA	40624485	40630453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
ES.4633.17	chr11	+	3279	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-8	-1694	-8	1694	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGACTGTGTGGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	40624485	40632567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ES.4633.18	chr11	+	2959	3	NIC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	0	15	intron_retention	FALSE	canonical	3	1122	junction_1	12.5	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTGTATGTGTGT	NA	False	NA	-37	True	AAAAAG	-18	NA	40624493	40630392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_40626894_40627319_40627472_40629985
ES.4633.19	chr11	+	1999	3	NIC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1147	junction_2	32.5	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624495	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_40624982_40626844_40627472_40629985
ES.4633.2	chr11	+	1614	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-38	1	-38	-1	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTACTTTTTCTTTTC	NA	False	NA	28	True	AATAAA	-20	NA	40624455	40630872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ES.4633.20	chr11	+	4488	5	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	2	2997	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	503.511854378822	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTAAGATTTTATTGG	NA	False	NA	NA	False	CATAAA	-17	NA	40624495	40633870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985_40631320_40631403
ES.4633.21	chr11	+	3912	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	5	-2340	5	2340	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCCCCTTTCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	40624498	40633213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ES.4633.22	chr11	+	4007	3	ISM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-270	-496	9	0	intron_retention	FALSE	canonical	3	70	junction_2	571	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624502	40630873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_40624982_40626844_40626894_40627394
ES.4633.23	chr11	+	4499	2	FSM	ENSMUSG00000020328.11	ENSMUST00000127057.2	806	2	-62	-3631	15	-3	multi-exon	FALSE	canonical	3	1212	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATATTTTACTTTTTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	40624508	40630870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844
ES.4633.24	chr11	+	1583	4	NIC	ENSMUSG00000020328.11	novel	727	4	NA	NA	18	-2	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	503.054889870104	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624511	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_40625083_40626844_40626894_40627394_40627472_40629985
ES.4633.25	chr11	+	1564	4	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	534.905806869043	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTTTACTTTTTCTT	NA	False	NA	25	True	AATAAA	-17	NA	40624511	40630869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626835_40626894_40627319_40627472_40629985
ES.4633.26	chr11	+	1728	5	NNC	ENSMUSG00000020328.11	novel	577	4	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	558.67745614084	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTTTACTTTTTCTT	NA	False	NA	25	True	AATAAA	-17	NA	40624519	40630869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40625083_40626633_40626714_40626844_40626894_40627319_40627472_40629985
ES.4633.28	chr11	+	3239	4	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	534.905806869043	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624576	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40626729_40626844_40626894_40627319_40627472_40629985
ES.4633.29	chr11	+	1431	5	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	565.078091948361	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624732	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626633_40626729_40626844_40626894_40627319_40627472_40629985
ES.4633.3	chr11	+	3896	2	FSM	ENSMUSG00000020328.11	ENSMUST00000144601.2	445	2	-2669	-782	-30	0	multi-exon	FALSE	canonical	3	1147	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624463	40630873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40627472_40629985
ES.4633.4	chr11	+	3334	4	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	519.35237449047	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624466	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40626714_40626844_40626894_40627319_40627472_40629985
ES.4633.5	chr11	+	3856	5	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-21	2342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	503.511854378822	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCCTTTCCTAGTTAC	NA	False	NA	NA	False	NA	NA	NA	40624472	40633215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985_40631320_40631403
ES.4633.6	chr11	+	3206	5	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-20	1693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	503.511854378822	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATAGACTGTGTGGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	40624473	40632566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985_40631320_40631403
ES.4633.7	chr11	+	1588	4	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	556.654490884806	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624473	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_40624982_40626844_40626894_40627326_40627472_40629985
ES.4633.8	chr11	+	1178	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	-20	419	-20	77	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTTTGTCTAAATATG	NA	False	NA	25	True	AGTAAA	-19	NA	40624473	40630454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ES.4633.9	chr11	+	1520	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-299	-494	-20	-2	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTACTTTTTCTTTT	NA	False	NA	27	True	AATAAA	-19	NA	40624473	40630871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
ES.4634.1	chr11	-	4625	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-2	975	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTGACTACATATTTAT	NA	False	NA	NA	False	NA	NA	NA	40624245	40591246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.10	chr11	-	3812	16	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	218.285338236192	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCAGTGATTAATTTTT	NA	False	NA	-3	True	AATAAA	-22	NA	40624243	40592216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40614188_40614414_40619233_40619334_40619948_40620048_40624140
ES.4634.11	chr11	-	3746	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-26	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	165.236383705284	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCAGTGATTAATTTTT	NA	False	NA	-3	True	AATAAA	-22	NA	40624275	40592216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40594763_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.12	chr11	-	3616	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCAGTGATTAATTTT	NA	False	NA	-4	True	AATAAA	-21	NA	40624233	40592217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40599069_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.13	chr11	-	3655	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAATCAGTGATTAATT	NA	False	NA	-6	True	AATAAA	-19	NA	40624233	40592219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40599110_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.14	chr11	-	3776	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	243.565674211948	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAATCAGTGATTAATT	NA	False	NA	-6	True	AATAAA	-19	NA	40624242	40592219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614097_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.17	chr11	-	3696	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.625727142571	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCAGTGATTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	40624273	40592220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.18	chr11	-	5180	17	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	1	intron_retention	FALSE	canonical	2	7	junction_12	159.343759192979	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCAGTGATTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	40624233	40592220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.2	chr11	-	3991	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-36	-63	-36	63	multi-exon	FALSE	canonical	3	534	junction_10	59.4855104336938	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCTATCTTTCCTCC	NA	False	NA	55	True	AATGAA	-29	NA	40624285	40592158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.21	chr11	-	3887	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	155.296657733237	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCCAATCAGTGATTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	40624226	40592220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.22	chr11	-	3626	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624238	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40599032_40600688_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.24	chr11	-	4622	5	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	24759	0	intron_retention	FALSE	canonical	3	578	junction_3	40.0460672226375	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40599459	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40596896_40598176_40598277_40598391_40598545_40598841
ES.4634.25	chr11	-	3490	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248.723745810696	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624262	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.3	chr11	-	3705	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-42	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGATTAATTTTTATTT	NA	False	NA	1	True	AATAAA	-26	NA	40624291	40592212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.30	chr11	-	3565	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	252.496010451883	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624235	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.31	chr11	-	3706	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	165.440510456176	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624252	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.32	chr11	-	3564	16	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-3	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	170.624135325444	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624252	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.34	chr11	-	5615	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	534	junction_9	61.1933411410098	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624226	40592221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.37	chr11	-	4287	15	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	8474	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	171.230778751475	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACCCAATCAGTGATTA	NA	False	NA	-9	True	AATAAA	-16	NA	40615744	40592222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596031_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699
ES.4634.38	chr11	-	4126	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	208.592675616829	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACCCAATCAGTGATTA	NA	False	NA	-9	True	AATAAA	-16	NA	40624253	40592222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596031_40596263_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.40	chr11	-	3627	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.516286452814	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACCCAATCAGTGATT	NA	False	NA	-10	True	AATAAA	-15	NA	40624233	40592223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606235_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.41	chr11	-	3854	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	213.164978264436	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACACCCAATCAGTGAT	NA	False	NA	-11	True	AATAAA	-14	NA	40624223	40592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604800_40605020_40605537_40605693_40606086_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.43	chr11	-	3747	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	161.211267175591	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACACCCAATCAGTGAT	NA	False	NA	-11	True	AATAAA	-14	NA	40624233	40592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598990_40600861_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.44	chr11	-	4287	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-4	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	243.370635936191	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACACCCAATCAGTGAT	NA	False	NA	-11	True	AATAAA	-14	NA	40624253	40592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40620048_40624140
ES.4634.49	chr11	-	3838	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-24	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	164.803185174771	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACACCCAATCAGTGAT	NA	False	NA	-11	True	AATAAA	-14	NA	40624273	40592224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.51	chr11	-	4927	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.400507414963	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATACACCCAATCAGTGA	NA	False	NA	-12	True	AATAAA	-13	NA	40624233	40592225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40595369_40596896_40598176_40598277_40598391_40598545_40598841_40599039_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.54	chr11	-	3998	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-3	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	160.846377308989	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624252	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614097_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.56	chr11	-	3954	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-56	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	161.211267175591	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624305	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614444_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.57	chr11	-	3651	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-88	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624337	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40599028_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.58	chr11	-	4132	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	-24	intron_retention	FALSE	non_canonical	0	0	junction_1	214.30211833735	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624233	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.6	chr11	-	3632	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	8	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGATTAATTTTTATTT	NA	False	NA	1	True	AATAAA	-26	NA	40624235	40592212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600648_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.60	chr11	-	5111	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	12	-24	intron_retention	FALSE	canonical	3	534	junction_10	61.1933411410098	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624206	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.61	chr11	-	3899	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-3917	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	157.965722706456	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40628166	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40628026
ES.4634.66	chr11	-	3838	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-4	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	213.972478261311	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624253	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598966_40600743_40601104_40604806_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.67	chr11	-	3824	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-8	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	161.66805668911	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624226	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40604999_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.7	chr11	-	3608	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-3	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTGATTAATTTTTAT	NA	False	NA	-1	True	AATAAA	-24	NA	40624252	40592214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40599039_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.70	chr11	-	2039	8	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	23272	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	220.601404328796	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40600946	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734
ES.4634.71	chr11	-	3615	19	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-9	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.337481440185	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624227	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598999_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.72	chr11	-	3905	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-4	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	161.656883852454	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAATATAAAAA	NA	False	NA	-32	True	NA	NA	NA	40624253	40592245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598578_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.74	chr11	-	3152	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	12	728	6	-728	multi-exon	FALSE	canonical	3	534	junction_10	59.4855104336938	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGGTCTCCACTAAAAT	NA	False	NA	NA	False	NA	NA	NA	40624237	40592949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.75	chr11	-	3290	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-21	-729	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	161.211267175591	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTGGTCTCCACTAAAA	NA	False	NA	NA	False	NA	NA	NA	40624270	40592950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.76	chr11	-	4501	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-8	-1324	intron_retention	FALSE	canonical	3	534	junction_9	61.3030382607583	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTAGTCTTAGGTATA	NA	False	NA	NA	False	NA	NA	NA	40624226	40593545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40593686_40594608_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.77	chr11	-	2722	16	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-13	-4168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	171.368012054629	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGATATGGGTGTTTGT	NA	False	NA	NA	False	AAAACA	-14	NA	40624262	40596389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40596896_40598176_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.78	chr11	-	2404	15	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-36	5684	-36	-5684	5prime_fragment	FALSE	canonical	3	534	junction_7	64.0654958234309	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTATTTCCTCCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	40624285	40597905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.79	chr11	-	2400	15	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	10	-5739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	226.618262138544	672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	40624233	40597960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40598277_40598391_40598545_40598841_40598992_40600631_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615745_40619253_40619334_40619948_40620048_40624140
ES.4634.8	chr11	-	5591	18	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-30	7	intron_retention	FALSE	non_canonical	0	0	junction_1	213.728735359425	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTGATTAATTTTTAT	NA	False	NA	-1	True	AATAAA	-24	NA	40624279	40592214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40592459_40592802_40593686_40594608_40596896_40598176_40598277_40598391_40598545_40598841_40599039_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.80	chr11	-	2355	15	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-25	-5739	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	168.899212187479	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	40624274	40597960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.81	chr11	-	4708	11	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	6	-6793	intron_retention	FALSE	canonical	2	7	junction_6	196.939584644632	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAATGTTTTCCTTTTT	NA	False	NA	NA	False	AAGAAA	-4	NA	40624237	40599014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.82	chr11	-	2021	9	NNC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	-8	6491	intron_retention	FALSE	canonical	2	7	junction_4	219.129385295537	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTGTGATGATTTTAC	NA	False	NA	NA	False	NA	NA	NA	40624226	40605238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40605687_40606067_40606244_40606695_40606771_40612465_40612584_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40620048_40624140
ES.4634.83	chr11	-	3732	3	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	14446	13017	14415	6491	internal_fragment	FALSE	canonical	3	534	junction_2	73.5	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTGTGATGATTTTAC	NA	False	NA	NA	False	NA	NA	NA	40609803	40605238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_40605687_40606067_40606244_40606695
ES.4634.84	chr11	-	1408	10	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	-22	13043	-22	6465	5prime_fragment	FALSE	canonical	3	534	junction_2	71.1602260942008	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40624271	40605264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4634.85	chr11	-	1474	7	FSM	ENSMUSG00000020330.17	ENSMUST00000156399.8	1443	7	-19	-12	-13	12	multi-exon	FALSE	canonical	3	653	junction_3	43.8203402796261	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAACTATGCCAAATGGC	NA	False	NA	NA	False	NA	NA	NA	40624262	40611717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ES.4635.1	chr11	-	3567	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	-50	-5	-50	5	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTGGTTTCTTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	40646188	40639373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.10	chr11	-	4504	2	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	803	0	intron_retention	FALSE	canonical	3	729	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40643962	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642187_40642266
ES.4635.11	chr11	-	3164	7	NNC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	270.650707657592	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646099	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40639814_40640122_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.12	chr11	-	3230	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	317.08309242216	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646110	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40642346_40644634_40644896_40645827
ES.4635.13	chr11	-	3398	6	NNC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.664715059665	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646073	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40641887_40642136_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.14	chr11	-	3458	6	NNC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	291.065216059906	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646090	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643179_40644634_40644896_40645827
ES.4635.15	chr11	-	5508	4	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	39	0	intron_retention	FALSE	canonical	3	729	junction_2	14.8847423745107	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646099	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40644896_40645827
ES.4635.16	chr11	-	5207	3	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	34	-2	intron_retention	FALSE	canonical	3	618	junction_1	67	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCTTGTTTTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	40646104	40639380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642346_40642930_40644896_40645827
ES.4635.17	chr11	-	3590	4	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	42	-2	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	330.172009043098	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCTTGTTTTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	40646096	40639380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642187_40642930_40643185_40644634_40644896_40645827
ES.4635.2	chr11	-	5548	3	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	79	0	intron_retention	FALSE	canonical	3	752	junction_2	6.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646059	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40644896_40645827
ES.4635.20	chr11	-	3687	4	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	104	-2	combination_of_known_junctions	FALSE	canonical	3	618	junction_1	56.0614741947524	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCTTGTTTTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	40646034	40639380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.21	chr11	-	3096	4	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	81	-2	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	354.77160101802	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCTTGTTTTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	40646057	40639380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40644634_40644896_40645827
ES.4635.24	chr11	-	3404	6	NNC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	95	-3	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_5	282.894750746634	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTTCCTTGTTTTGGTT	NA	False	NA	-8	True	AATAAA	-13	NA	40646043	40639381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644886_40645827
ES.4635.27	chr11	-	3451	3	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	84	-4	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	367.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACCTTCCTTGTTTTGGT	NA	False	NA	-9	True	AATAAA	-12	NA	40646054	40639382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642346_40644634_40644896_40645827
ES.4635.28	chr11	-	3108	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	2	402	2	136	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTAAGTCTTATGG	NA	False	NA	NA	False	AATAAA	-23	NA	40646136	40639780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.29	chr11	-	2987	6	NNC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	70	132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	284.664715059665	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTCTCTAAGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	40646068	40639784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_40641887_40642136_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.3	chr11	-	4864	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	98	0	intron_retention	FALSE	canonical	3	618	junction_3	58.0301645698166	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646040	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40644896_40645827
ES.4635.30	chr11	-	2768	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	84	132	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	317.08309242216	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTCTCTAAGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	40646054	40639784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40642346_40644634_40644896_40645827
ES.4635.31	chr11	-	5052	3	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	91	-67	intron_retention	FALSE	canonical	3	729	junction_1	11.5	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATTTGAGAGAATTGTC	NA	False	NA	2	True	AATAAA	-35	NA	40646047	40639983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642187_40642266_40644896_40645827
ES.4635.32	chr11	-	2914	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	-9	607	-9	-69	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCATTTGAGAGAATTG	NA	False	NA	0	True	AATAAA	-33	NA	40646147	40639985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.33	chr11	-	4164	2	ISM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	1771	624	398	-86	intron_retention	FALSE	canonical	3	765	junction_1	0	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCTGCTTCAATCTAAT	NA	False	NA	-17	True	AATAAA	-16	NA	40644367	40640002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_40641887_40642087
ES.4635.35	chr11	-	4199	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	137	-88	intron_retention	FALSE	canonical	3	618	junction_3	58.0301645698166	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGCTGCTTCAATCTA	NA	False	NA	-19	True	AATAAA	-14	NA	40646001	40640004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40644896_40645827
ES.4635.36	chr11	-	2556	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	41	915	41	-377	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTAAATCTCAAAATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40646097	40640293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.37	chr11	-	1757	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	42	1713	42	-1175	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACATTTTTGACATCTA	NA	False	NA	NA	False	TATAAA	-16	NA	40646096	40641091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.38	chr11	-	1269	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	42	2201	42	-1663	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGAAAAGTGAATTGT	NA	False	NA	82	True	TATAAA	-18	NA	40646096	40641579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.39	chr11	-	2584	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	95	-1745	intron_retention	FALSE	canonical	3	618	junction_3	58.0301645698166	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTCCAGTATGATCA	NA	False	NA	0	True	GATAAA	-26	NA	40646043	40641661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40644896_40645827
ES.4635.41	chr11	-	1050	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	93	-1752	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	308.372339875028	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGAAAATTTTCCAGT	NA	False	NA	-7	True	GATAAA	-19	NA	40646045	40641668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642930_40643185_40644634_40644896_40645827
ES.4635.6	chr11	-	3268	4	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	343.825860316269	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646072	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642930_40643185_40644634_40644896_40645827
ES.4635.7	chr11	-	3431	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	308.372339875028	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646136	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40641887_40642087_40642187_40642930_40643185_40644634_40644896_40645827
ES.4635.8	chr11	-	3671	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	618	junction_2	50.9043220168975	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646096	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ES.4635.9	chr11	-	5781	2	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	47	0	intron_retention	FALSE	canonical	3	752	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646091	40639378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_40644896_40645827
ES.4636.1	chr11	+	1073	3	Intergenic	novelGene_3595	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTGGTATTTGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	40646903	40658738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_40646934_40650613_40651175_40658256
ES.4636.2	chr11	+	9528	1	Intergenic	novelGene_3596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCATTTTGGTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	40649206	40658734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_40649200_40658700
ES.4637.1	chr11	+	176	1	Intergenic	novelGene_3597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTGCATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	40748594	40748770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_40748600_40748800
ES.4638.1	chr11	+	1766	1	NIC	ENSMUSG00000086475.2	novel	375	3	NA	NA	240	-254	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCGGCTCCTCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	41109903	41111669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_41109900_41111700
ES.4639.1	chr11	-	178	1	Intergenic	novelGene_3598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	41445986	41445808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_41445800_41446000
ES.464.1	chr1	-	3293	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	-8	8	-8	-8	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGAAGCTGCCTTAAGT	678	False	NA	NA	False	AATAAA	-18	NA	53824391	53794672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ES.464.3	chr1	-	2654	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	43	596	-24	-596	multi-exon	FALSE	canonical	3	57	junction_1	6.25316246521123	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATATTCTTTCCTTGTGT	729	False	NA	-1	True	GATAAA	-26	NA	53824340	53795260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ES.464.4	chr1	-	2573	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	20	700	20	-700	multi-exon	FALSE	canonical	3	57	junction_1	6.25316246521123	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGTTTGCCTTTTGT	706	False	NA	-105	True	ATTAAA	-35	NA	53824363	53795364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ES.4640.1	chr11	+	613	2	Intergenic	novelGene_3599	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATGTTTGATGACATC	NA	False	NA	NA	False	TATAAA	-14	NA	41986658	41991259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_41986788_41990775
ES.4641.1	chr11	-	4216	10	FSM	ENSMUSG00000010803.14	ENSMUST00000020707.12	4688	10	472	0	2	0	multi-exon	FALSE	canonical	1	1	junction_3	2.82842712474619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATACTTGATTCTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	42073285	42021765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
ES.4641.2	chr11	-	3652	10	FSM	ENSMUSG00000010803.14	ENSMUST00000020707.12	4688	10	491	545	21	-545	multi-exon	FALSE	canonical	1	1	junction_3	2.82842712474619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGTGTTGCCGTTTATC	NA	False	NA	NA	False	AATAAA	-18	NA	42073266	42022310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
ES.4641.3	chr11	-	3327	9	NNC	ENSMUSG00000010803.14	novel	4045	10	NA	NA	1707	-545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.13996417177012	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGTGTTGCCGTTTATC	NA	False	NA	NA	False	AATAAA	-18	NA	42068963	42022310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42068925
ES.4641.4	chr11	-	5051	9	NIC	ENSMUSG00000010803.14	novel	4688	10	NA	NA	-61	-548	intron_retention	FALSE	canonical	1	1	junction_2	2.66634112596269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATCCGTGTTGCCGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	42073051	42022313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
ES.4642.1	chr11	+	200	1	Intergenic	novelGene_3600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTCTAATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	42151605	42151805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_42151600_42151800
ES.4643.1	chr11	+	955	7	NNC	ENSMUSG00000007653.13	novel	3989	10	NA	NA	227	37336	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	2.23606797749979	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAAATGGAAAG	NA	False	NA	NA	False	NA	NA	NA	42310817	42459785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_42310862_42312027_42312254_42312378_42312471_42313407_42313476_42378022_42378244_42420238_42420322_42459564
ES.4643.2	chr11	+	4042	9	ISM	ENSMUSG00000007653.13	ENSMUST00000007797.10	3989	10	1113	0	-409	0	3prime_fragment	FALSE	canonical	1	1	junction_6	1.89983551919633	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGGCTTTCTCCTAC	NA	False	NA	NA	False	AGTAAA	-14	NA	42311696	42519855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_42312254_42312378_42312471_42313407_42313476_42378022_42378244_42420238_42420322_42482684_42482823_42484623_42484777_42488367_42488613_42517370
ES.4643.3	chr11	+	2809	1	Genic_Genomic	ENSMUSG00000007653.13	novel	NA	NA	NA	NA	207641	2771	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCTTTACTTTTGGGA	NA	False	NA	NA	False	AATAAA	-12	NA	42519817	42522626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_42519800_42522600
ES.4644.1	chr11	+	180	1	Intergenic	novelGene_3601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	43258172	43258352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43258200_43258400
ES.4645.10	chr11	-	3640	3	NIC	ENSMUSG00000020415.17	novel	1674	4	NA	NA	1	3	intron_retention	FALSE	canonical	3	9779	junction_2	315	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43317039	43311087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43312093_43313719_43315725_43316409
ES.4645.11	chr11	-	5946	1	NIC	ENSMUSG00000020415.17	novel	741	6	NA	NA	4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1003	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGAATACTTAACCAA	NA	False	NA	-26	True	AATAAA	-20	NA	43317036	43311090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43311100_43317000
ES.4645.12	chr11	-	744	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	-18	15	-18	0	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTGAATACTTAACCA	NA	False	NA	-27	True	AATAAA	-19	NA	43317096	43311091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ES.4645.13	chr11	-	4208	2	ISM	ENSMUSG00000020415.17	ENSMUST00000150726.2	534	3	-90	-2646	5	0	intron_retention	FALSE	canonical	3	9157	junction_1	0	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGATTGTGAATACTTA	NA	False	NA	-31	True	AATAAA	-15	NA	43317035	43311095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_43313814_43315545
ES.4645.15	chr11	-	693	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	5	-2	1	-2	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCAGATTGTGAATACT	NA	False	NA	-33	True	AATAAA	-13	NA	43317039	43311097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ES.4645.16	chr11	-	3091	3	ISM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	277	-3	277	-2	intron_retention	FALSE	canonical	3	8449	junction_1	980	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCAGATTGTGAATACT	NA	False	NA	-33	True	AATAAA	-13	NA	43316513	43311097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_43311236_43311933_43312093_43313719
ES.4645.17	chr11	-	580	4	NIC	ENSMUSG00000020415.17	novel	948	5	NA	NA	277	-2	combination_of_known_splicesites	FALSE	canonical	3	261	junction_2	4208.51739531473	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCAGATTGTGAATACT	NA	False	NA	-33	True	AATAAA	-13	NA	43316513	43311097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43311236_43311933_43312093_43315545_43315725_43316409
ES.4645.18	chr11	-	1391	5	NIC	ENSMUSG00000020415.17	novel	696	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	206	junction_4	4169.94624515712	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCAGATTGTGAATACT	NA	False	NA	-33	True	AATAAA	-13	NA	43317039	43311097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ES.4645.19	chr11	-	5011	3	FSM	ENSMUSG00000020415.17	ENSMUST00000148130.2	388	3	-273	-4350	-235	1	multi-exon	FALSE	canonical	3	2427	junction_2	3676	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCAGATTGTGAATAC	NA	False	NA	-34	True	AATAAA	-12	NA	43317313	43311098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43315725_43316409_43316509_43317027
ES.4645.2	chr11	-	2335	4	NIC	ENSMUSG00000020415.17	novel	948	5	NA	NA	268	4	intron_retention	FALSE	canonical	3	8449	junction_1	543.348466046933	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGATTGGTATTTTT	NA	False	NA	-8	True	AATAAA	-38	NA	43316522	43311072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43311236_43311933_43313814_43315545_43315725_43316409
ES.4645.20	chr11	-	5433	2	NIC	ENSMUSG00000020415.17	novel	388	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_1	0	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTTCAGATTGTGAAT	NA	False	NA	-36	True	AATAAA	-10	NA	43317040	43311100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43316509_43317015
ES.4645.3	chr11	-	725	6	FSM	ENSMUSG00000020415.17	ENSMUST00000101340.11	700	6	-6	-19	5	0	multi-exon	FALSE	canonical	3	4089	junction_5	2240.31940579909	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	False	NA	-12	True	AATAAA	-34	NA	43317035	43311076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317000
ES.4645.4	chr11	-	774	5	NIC	ENSMUSG00000020415.17	novel	741	6	NA	NA	277	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4118.28200679604	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	False	NA	-12	True	AATAAA	-34	NA	43316513	43311076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409
ES.4645.6	chr11	-	3517	3	NIC	ENSMUSG00000020415.17	novel	741	6	NA	NA	19	0	intron_retention	FALSE	canonical	3	9157	junction_1	311	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	False	NA	-12	True	AATAAA	-34	NA	43317010	43311076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43313814_43315545_43315725_43316409
ES.4645.8	chr11	-	700	6	NNC	ENSMUSG00000020415.17	novel	741	6	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_4	4044.7149911953	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43317060	43311087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315713_43316409_43316509_43317027
ES.4645.9	chr11	-	4325	2	ISM	ENSMUSG00000020415.17	ENSMUST00000117446.8	1674	4	-231	-3	1	3	intron_retention	FALSE	canonical	3	10409	junction_1	0	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAATACTTAACCAACCC	NA	False	NA	-23	True	AATAAA	-23	NA	43317039	43311087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_43312093_43313719
ES.4646.1	chr11	+	2710	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-31	946	-16	-946	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324554	43337862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.10	chr11	+	3033	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	2	-684	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGACTGAAGGTTCTTT	NA	False	NA	NA	False	AATACA	-13	NA	43324572	43338124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.11	chr11	+	2946	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-12	691	3	-691	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCACTTGAGACTGAAG	NA	False	NA	NA	False	AATACA	-6	NA	43324573	43338117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.12	chr11	+	5476	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	-3580	1670	4	926	multi-exon	FALSE	canonical	3	210	junction_13	21.5180275630477	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCTCAACAGTCAAGAA	NA	False	NA	14	True	AATAAA	-19	NA	43324589	43337138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.15	chr11	+	2951	18	NNC	ENSMUSG00000020409.11	novel	3566	15	NA	NA	180	-949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.6579695989577	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43324765	43337859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43324840_43326190_43326374_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.16	chr11	+	1958	16	NNC	ENSMUSG00000020409.11	novel	3566	15	NA	NA	187	923	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1565518167957	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTTCTCAACAGTCAA	NA	False	NA	11	True	AATAAA	-16	NA	43324772	43337135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43324840_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.17	chr11	+	3616	16	NNC	ENSMUSG00000020409.11	novel	3566	15	NA	NA	200	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1565518167957	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCATGAGTTGTTTGAA	NA	False	NA	NA	False	AATAAA	-18	NA	43324785	43338806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43324840_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.18	chr11	+	4748	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	-2131	949	1453	-949	multi-exon	FALSE	canonical	3	210	junction_13	21.5180275630477	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43326038	43337859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.19	chr11	+	2695	16	NIC	ENSMUSG00000020409.11	novel	3566	15	NA	NA	-990	-949	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	47.2748935012608	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43327179	43337859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.2	chr11	+	2418	15	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-15	1006	intron_retention	FALSE	canonical	3	184	junction_1	29.1576468074318	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGGAAAGTTTGAC	NA	False	NA	20	True	NA	NA	NA	43324555	43337218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43336083_43336185_43336300_43336838
ES.4646.20	chr11	+	4403	14	NIC	ENSMUSG00000020409.11	novel	3566	15	NA	NA	-574	-5	intron_retention	FALSE	canonical	3	210	junction_12	22.3275773441538	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGCCATGAGTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	43327595	43338803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43328358_43328949_43329104_43329630_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.21	chr11	+	3580	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	1	-15	1	15	multi-exon	FALSE	canonical	3	210	junction_13	21.5180275630477	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTACCCCTGTTTGGCAG	NA	False	NA	NA	False	AATAAA	-35	NA	43328170	43338823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.22	chr11	+	2005	9	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	4010	949	-54	-949	3prime_fragment	FALSE	canonical	3	210	junction_7	21.9911203670936	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTTGGATTTTCGTACA	NA	False	NA	11	True	AATAAA	-22	NA	43332179	43337859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.23	chr11	+	495	2	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	8014	1591	3950	1005	3prime_fragment	FALSE	canonical	3	255	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATTTGGAAAGTTTGA	NA	False	NA	19	True	NA	NA	NA	43336183	43337217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_43336300_43336838
ES.4646.3	chr11	+	2941	18	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-15	-951	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	91.6579695989577	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTTGGATTTTCGTA	NA	False	NA	9	True	AATAAA	-20	NA	43324555	43337857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43325880_43326039_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.4	chr11	+	3656	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-30	-1	-15	1	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGAGTTGTTTGAAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	43324555	43338809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.5	chr11	+	2786	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-15	-948	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTGGATTTTCGTACAC	NA	False	NA	12	True	AATAAA	-23	NA	43324555	43337860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.6	chr11	+	2152	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	-15	1014	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTTTGACTCTCTTCC	NA	False	NA	28	True	NA	NA	NA	43324555	43337226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.7	chr11	+	2069	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-30	1586	-15	1010	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGAAAGTTTGACTCTC	NA	False	NA	24	True	NA	NA	NA	43324555	43337222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.8	chr11	+	3710	17	NIC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAGCCATGAGTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	43324572	43338801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4646.9	chr11	+	2826	17	NNC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	2	-944	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	73.1481533857827	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATTTTCGTACACTTCC	NA	False	NA	16	True	AATAAA	-27	NA	43324572	43337864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43324647_43327180_43327313_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ES.4647.1	chr11	+	179	1	Intergenic	novelGene_3602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATCAATTTTG	NA	False	NA	NA	False	NA	NA	NA	43356982	43357161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43357000_43357200
ES.4648.1	chr11	+	3373	6	FSM	ENSMUSG00000045877.3_ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-44	-657	-44	657	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGCTGCCTTTGTC	NA	False	NA	4	True	AATAAA	-16	NA	43419566	43478481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ES.4648.2	chr11	+	3516	6	FSM	ENSMUSG00000045877.3_ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-15	-829	-15	829	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTGAAAGGCAGTCCA	NA	False	NA	NA	False	NA	NA	NA	43419595	43478653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ES.4648.3	chr11	+	2062	6	FSM	ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	-6	616	-6	-616	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTGTCCCACATGA	NA	False	NA	NA	False	AAAAAG	-16	NA	43419604	43477208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ES.4648.4	chr11	+	2807	5	ISM	ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	255	-3	-207	3	3prime_fragment	FALSE	canonical	3	6	junction_4	2.1650635094611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTGTGTCTCTGTTGGTT	NA	False	NA	NA	False	NA	NA	NA	43419865	43477827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ES.4649.1	chr11	-	2399	1	Intergenic	novelGene_3603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAACTCTTCAAACTCAC	NA	False	NA	NA	False	NA	NA	NA	43453691	43451292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_43451300_43453700
ES.465.1	chr1	+	181	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCAAACTAG	NA	False	NA	NA	False	NA	NA	NA	54080919	54081100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_54080900_54081100
ES.4650.1	chr11	+	175	1	Intergenic	novelGene_3604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGATTTATTTACT	NA	False	NA	NA	False	NA	NA	NA	43560671	43560846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43560700_43560800
ES.4651.1	chr11	+	3578	5	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	-20	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.49583217528247	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43572804	43598021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43574402_43574949_43575053_43577183_43577265_43595360
ES.4651.10	chr11	+	3771	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-65	-1892	-5	812	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATTTCATTTGTAGACT	NA	False	NA	NA	False	ATTAAA	-11	NA	43572819	43613130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ES.4651.11	chr11	+	3888	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-65	-2009	-5	929	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGAACTGTTTTACTG	NA	False	NA	NA	False	AATAAA	-27	NA	43572819	43613247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ES.4651.12	chr11	+	3266	7	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-5	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.11219609778396	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCCAAAAGAAAAAAGAA	NA	False	NA	106	True	NA	NA	NA	43572819	43612329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43574402_43574949_43575053_43577183_43577253_43578837_43578898_43595360_43596395_43611047
ES.4651.13	chr11	+	3762	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	1	929	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGAACTGTTTTACTG	NA	False	NA	NA	False	AATAAA	-27	NA	43572825	43613247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43595360_43596305_43611047
ES.4651.14	chr11	+	3551	4	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	5	-23	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	23.4568161143456	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAGAAAAAAAAAAAA	NA	False	NA	72	True	TTTAAA	-33	NA	43572829	43612295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43574307_43575053_43595360_43596305_43611047
ES.4651.15	chr11	+	3651	5	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	11	14	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	20.1416856295594	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572835	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43595360_43596305_43611047
ES.4651.16	chr11	+	2425	4	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	27	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.7187182496021	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCCAAAAGAAAAAAGAA	NA	False	NA	106	True	NA	NA	NA	43572851	43612329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43572874_43573266_43573444_43595360_43596305_43611047
ES.4651.17	chr11	+	3319	3	NNC	ENSMUSG00000044950.8	novel	3277	2	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTGTGTGTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	43572851	43598018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43577183_43577253_43595360
ES.4651.18	chr11	+	4032	4	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	28	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.05536398239638	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGTAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	43572852	43597975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43575053_43577183_43577265_43595360
ES.4651.19	chr11	+	4077	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-32	-2231	28	1151	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTTTTGTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43572852	43613469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ES.4651.2	chr11	+	3137	6	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-11	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.9490318693103	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572813	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43574402_43574949_43575053_43577183_43577265_43595360_43596305_43611047
ES.4651.20	chr11	+	2906	3	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	28	10	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	49	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCCAAAAGAAAAAAGA	NA	False	NA	105	True	NA	NA	NA	43572852	43612328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43595360_43596395_43611047
ES.4651.21	chr11	+	2933	5	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	29	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.5558456619064	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572853	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573046_43573128_43573444_43595360_43596382_43607856_43607977_43611047
ES.4651.22	chr11	+	3903	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	37	-663	-23	663	multi-exon	FALSE	canonical	3	104	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCCTTAAGCTTGATA	NA	False	NA	NA	False	AATAAA	-20	NA	43572861	43598681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360
ES.4651.23	chr11	+	2260	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-7	-439	-7	18	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATATTAAGATGTATT	NA	False	NA	NA	False	AATAAA	-38	NA	43572877	43611677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ES.4651.24	chr11	+	3970	3	NIC	ENSMUSG00000044950.8	novel	3277	2	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43572879	43598021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43574307_43575053_43595360
ES.4651.25	chr11	+	2861	4	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-4	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6958174002346	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572880	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43577183_43577253_43595360_43596305_43611047
ES.4651.26	chr11	+	4703	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	59	-1485	-1	1485	multi-exon	FALSE	canonical	3	104	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTGGTTTCTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	43572883	43599503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360
ES.4651.27	chr11	+	3116	3	NNC	ENSMUSG00000044950.8	novel	3277	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTGTGTGTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	43572886	43598018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43595360_43595744_43595842
ES.4651.28	chr11	+	4201	5	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.52936105461599	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATTATTTGTGTGTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	43572892	43598017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43590105_43590285_43595360
ES.4651.29	chr11	+	2557	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	10	-207	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCTTGTTTAATG	NA	False	NA	NA	False	AATACA	-15	NA	43572894	43612111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43595360_43596305_43611047
ES.4651.3	chr11	+	3994	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-9	1151	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTTTTGTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	43572815	43613469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43595360_43596305_43611047
ES.4651.30	chr11	+	3263	3	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	161	596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGGTTGTAAGAATCTA	NA	False	NA	NA	False	ATTAAA	-21	NA	43573045	43612914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43595360_43596359_43611047
ES.4651.31	chr11	+	2857	6	NNC	ENSMUSG00000044950.8	novel	1506	2	NA	NA	197	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1395573578154	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	74	True	TTTAAA	-35	NA	43573571	43612297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573969_43574307_43574402_43574949_43575053_43577183_43577253_43595360_43596305_43611047
ES.4651.32	chr11	+	3321	5	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	200	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.34428877022476	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43573574	43598021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573969_43574307_43574402_43574949_43575053_43577183_43577253_43595360
ES.4651.33	chr11	+	4367	3	NNC	ENSMUSG00000044950.8	novel	1506	2	NA	NA	-7923	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	1076	False	NA	109	True	NA	NA	NA	43588146	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43590285_43595360_43596305_43611047
ES.4651.34	chr11	+	4329	1	NIC	ENSMUSG00000044950.8	novel	3277	2	NA	NA	-2380	0	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTGTGTGTGTTTC	6619	False	NA	NA	False	AATAAA	-14	NA	43593689	43598018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43593700_43598000
ES.4651.35	chr11	+	200	1	Intergenic	novelGene_3606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTCTGAGCCATCTCTT	3181	False	NA	NA	False	NA	NA	NA	43601859	43602059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43601900_43602100
ES.4651.36	chr11	+	172	1	Intergenic	novelGene_3607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGC	5139	False	NA	NA	False	NA	NA	NA	43603817	43603989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43603800_43604000
ES.4651.37	chr11	+	6945	1	Genic_Genomic	ENSMUSG00000044950.8	novel	NA	NA	NA	NA	-3095	14	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	6709	False	NA	109	True	NA	NA	NA	43605387	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_43605400_43612300
ES.4651.38	chr11	+	2928	1	Genic_Genomic	ENSMUSG00000044950.8	novel	NA	NA	NA	NA	1832	924	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTTAAGAACTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	43610314	43613242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_43610300_43613200
ES.4651.4	chr11	+	2976	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	-68	-1094	-8	14	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572816	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ES.4651.5	chr11	+	3814	6	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-8	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.7191549138607	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	74	True	TTTAAA	-35	NA	43572816	43612297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43590105_43590285_43595360_43596305_43611047
ES.4651.6	chr11	+	4025	4	NNC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-8	1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6958174002346	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	43572816	43613432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43577183_43577253_43595360_43596305_43611047
ES.4651.7	chr11	+	2856	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	-8	14	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAAGAAAAAAGAACTA	NA	False	NA	109	True	NA	NA	NA	43572816	43612332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_43573444_43595360_43596305_43611047
ES.4651.8	chr11	+	3288	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	-8	-3	-8	3	multi-exon	FALSE	canonical	3	104	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43572816	43598021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_43573444_43595360
ES.4651.9	chr11	+	4102	4	NNC	ENSMUSG00000044950.8	novel	2739	2	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	2.05480466765633	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	43572816	43598021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_43573444_43574307_43575053_43577183_43577253_43595360
ES.4652.1	chr11	-	3104	1	Antisense	novelGene_ENSMUSG00000044950.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTTCTTGGTCATGTT	NA	False	NA	NA	False	NA	NA	NA	43573540	43570436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_43570400_43573500
ES.4653.1	chr11	-	1028	1	Intergenic	novelGene_3605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCACAC	NA	False	NA	NA	False	NA	NA	NA	43576645	43575617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_43575600_43576600
ES.4654.1	chr11	-	4743	1	Antisense	novelGene_ENSMUSG00000044950.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	3233	False	NA	NA	False	NA	NA	NA	43598326	43593583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_43593600_43598300
ES.4655.1	chr11	-	7903	8	NNC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	4	246	intron_retention	FALSE	canonical	0	0	junction_1	255.299184231732	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTAAGTGTATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	43638815	43620092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43620149_43620243_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.10	chr11	-	1605	9	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	323.485316513748	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGGACTATGTTGTTA	NA	False	NA	-8	True	AATAAA	-14	NA	43638814	43620833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43621435_43627245_43627301_43627799_43627960_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.11	chr11	-	1511	9	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	316.60678984349	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGGACTATGTTGTTA	NA	False	NA	-8	True	AATAAA	-14	NA	43638795	43620833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43637978_43638064_43638748
ES.4655.12	chr11	-	1194	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-11	255	-1	-255	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCGTGTCCCTGGTTCT	NA	False	NA	NA	False	NA	NA	NA	43638820	43621090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.13	chr11	-	1312	8	NNC	ENSMUSG00000041278.11	novel	501	2	NA	NA	0	-1233	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	255.299184231732	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCATTGAAGCTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	43638835	43622068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43622516_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.14	chr11	-	4603	3	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	2	7351	intron_retention	FALSE	canonical	3	687	junction_1	45	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTATTTCCCGTTTC	NA	False	NA	NA	False	NA	NA	NA	43638833	43628493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43632649_43635911_43636275_43638748
ES.4655.15	chr11	-	7870	2	FSM	ENSMUSG00000041278.11	ENSMUST00000147984.2	501	2	-20	-7349	-4	7349	multi-exon	FALSE	canonical	3	777	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGAAGTATTTCCCGTT	NA	False	NA	NA	False	NA	NA	NA	43638839	43628495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43636275_43638748
ES.4655.16	chr11	-	1894	5	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	-4	7348	intron_retention	FALSE	canonical	3	649	junction_2	46.4838681695059	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAAGTATTTCCCGT	NA	False	NA	NA	False	NA	NA	NA	43638839	43628496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43628843_43629623_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.17	chr11	-	2654	4	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	-1	7346	intron_retention	FALSE	canonical	3	649	junction_1	53.6739125543209	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGAAGTATTTCCC	NA	False	NA	NA	False	NA	NA	NA	43638820	43628498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.2	chr11	-	1960	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-13	-509	-3	12	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTGTGTGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	43638822	43620326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.3	chr11	-	6228	1	Genic_Genomic	ENSMUSG00000041278.11	novel	NA	NA	NA	NA	12247	4	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTACAACTTGTGTG	4506	False	NA	NA	False	NA	NA	NA	43626562	43620334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_43620300_43626600
ES.4655.4	chr11	-	1492	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	-45	-9	-19	9	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTTGTTAATTTTGT	NA	False	NA	-1	True	AATAAA	-21	NA	43638854	43620826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.5	chr11	-	2095	9	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	316.180105912753	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTATGTTGTTAATTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	43638833	43620827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43637978_43638604_43638748
ES.4655.6	chr11	-	7279	7	NIC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	2	6	intron_retention	FALSE	canonical	3	649	junction_4	53.2741859523812	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTATGTTGTTAATTT	NA	False	NA	-4	True	AATAAA	-18	NA	43638833	43620829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.7	chr11	-	4961	8	NNC	ENSMUSG00000041278.11	novel	1965	8	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	253.925989538813	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTATGTTGTTAATT	NA	False	NA	-5	True	AATAAA	-17	NA	43638799	43620830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43621435_43623717_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4655.8	chr11	-	1558	9	NNC	ENSMUSG00000041278.11	novel	1438	8	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	313.165690968854	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGGGACTATGTTGTTA	NA	False	NA	-8	True	AATAAA	-14	NA	43638826	43620833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_43621435_43622201_43622303_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ES.4656.1	chr11	+	219	1	Intergenic	novelGene_3608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGAGGGGTTAGTTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	43710900	43711119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_43710900_43711100
ES.4657.1	chr11	+	2485	1	Intergenic	novelGene_3611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAGCCTAA	NA	False	NA	NA	False	NA	NA	NA	44310506	44312991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_44310500_44313000
ES.4658.1	chr11	-	3079	3	Intergenic	novelGene_3609	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTTGGTTGTGATG	NA	False	NA	NA	False	NA	NA	NA	44313622	44305860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44308660_44309628_44309763_44313476
ES.4658.2	chr11	-	3108	2	Intergenic	novelGene_3610	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGCTTTTGGTTGTGA	NA	False	NA	NA	False	NA	NA	NA	44316490	44305862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44308660_44316179
ES.4659.1	chr11	+	152	1	Intergenic	novelGene_3612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	44317584	44317736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_44317600_44317700
ES.466.1	chr1	-	3700	12	NNC	ENSMUSG00000042807.16	novel	11263	29	NA	NA	-862	-4290	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	1.31110955471418	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTACTCGTTTGTAT	8100	False	NA	NA	False	AATACA	-23	NA	53906533	53850330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53906183
ES.466.2	chr1	-	6894	28	NIC	ENSMUSG00000042807.16	novel	11171	29	NA	NA	25	-4290	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	1.24831848491502	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTACTCGTTTGTAT	NA	False	NA	NA	False	AATACA	-23	NA	54234302	53850330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53964468_53965843_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972_53990081_54079359_54079687_54234134
ES.466.3	chr1	-	4573	21	ISM	ENSMUSG00000042807.16	ENSMUST00000120904.8	11263	29	268594	4299	-58942	-4293	3prime_fragment	FALSE	canonical	0	0	junction_9	1.28452325786651	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTTTTACTCGTTTG	NA	False	NA	NA	False	AATACA	-20	NA	53964613	53850333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468
ES.4660.1	chr11	+	157	1	Intergenic	novelGene_3613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCAAACTATTAA	NA	False	NA	NA	False	NA	NA	NA	44355701	44355858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_44355700_44355900
ES.4661.1	chr11	-	2361	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	23	-296	23	296	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTATGCATTGCCTT	NA	False	NA	NA	False	AATAGA	-15	NA	44361302	44345101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.10	chr11	-	4355	10	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	28	-4	intron_retention	FALSE	canonical	2	61	junction_8	53.3708201590012	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361297	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.11	chr11	-	2141	10	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	1	-4	intron_retention	FALSE	canonical	2	8	junction_9	75.1528483644096	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361324	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356471_44356822_44356915_44357641_44357822_44361254
ES.4661.12	chr11	-	1727	12	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.0363541961666	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361302	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_44346050_44346381_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.13	chr11	-	2131	12	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_1	80.2827647384517	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361324	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_44346443_44347052_44347103_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.14	chr11	-	2136	10	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	23	-4	intron_retention	FALSE	canonical	2	61	junction_8	53.0739060760826	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361302	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.15	chr11	-	1299	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	23	766	23	212	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAGGAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	44361302	44346163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.2	chr11	-	5485	10	ISM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	17	2	17	0	intron_retention	FALSE	canonical	2	61	junction_9	51.8454493401682	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	44361308	44345399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641
ES.4661.3	chr11	-	5946	9	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	55	0	intron_retention	FALSE	canonical	2	61	junction_8	54.7812410867078	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	44361270	44345399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641
ES.4661.4	chr11	-	7758	9	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	45	0	intron_retention	FALSE	canonical	2	61	junction_8	54.9129993717335	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	44361280	44345399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641
ES.4661.5	chr11	-	2266	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	-184	6	-184	-4	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361509	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.6	chr11	-	2178	11	NNC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	-113	-4	intron_retention	FALSE	canonical	2	8	junction_10	71.3344236676795	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361438	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357822_44361254
ES.4661.7	chr11	-	2820	10	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	10	-4	intron_retention	FALSE	canonical	2	61	junction_8	50.8111973661099	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361315	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4661.8	chr11	-	6823	3	ISM	ENSMUSG00000041231.16	ENSMUST00000156551.2	490	4	-4158	-1676	-1486	-4	intron_retention	FALSE	canonical	3	211	junction_2	14.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44356338	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_44347319_44349031_44349149_44351547
ES.4661.9	chr11	-	4880	9	NIC	ENSMUSG00000041231.16	novel	2088	11	NA	NA	2	-4	intron_retention	FALSE	canonical	2	61	junction_7	56.1892727751481	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	44361323	44345403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ES.4662.1	chr11	+	3460	11	NNC	ENSMUSG00000019189.14	novel	614	2	NA	NA	-292	-2	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	109.849169318662	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9435	False	NA	10	True	AATAAA	-16	NA	44409498	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44409702_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.10	chr11	+	4191	11	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	111.282029097245	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9729	False	NA	10	True	AATAAA	-16	NA	44409792	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_44410102_44415129_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.11	chr11	+	3962	11	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	107.560401635546	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9729	False	NA	12	True	AATAAA	-18	NA	44409792	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_44410496_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.12	chr11	+	6491	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	113.483434914528	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9729	False	NA	12	True	AATAAA	-18	NA	44409792	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44445570_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.13	chr11	+	3457	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	109.765932784266	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTATTCCTGTGATGTG	9736	False	NA	13	True	AATAAA	-19	NA	44409799	44456348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442575_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.14	chr11	+	6874	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	335	junction_5	29.2718210259089	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9739	False	NA	10	True	AATAAA	-16	NA	44409802	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.15	chr11	+	3608	12	Fusion	ENSMUSG00000057098.15_ENSMUSG00000019189.14	novel	3570	11	NA	NA	-7	-25633	multi-exon	FALSE	non_canonical	0	0	junction_11	109.554545077361	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	9739	False	NA	NA	False	NA	NA	NA	44409802	44508653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746_44456347_44508602
ES.4662.16	chr11	+	920	4	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-6	8854	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.075114916449	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAAGATACTCTGTTTC	9740	False	NA	NA	False	AATAAA	-14	NA	44409803	44424039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44423742
ES.4662.17	chr11	+	6085	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	286	junction_6	38.5355375506945	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9743	False	NA	10	True	AATAAA	-16	NA	44409806	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44450947_44452291_44452649_44454746
ES.4662.18	chr11	+	2108	10	ISM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	17	3543	-2	0	5prime_fragment	FALSE	canonical	3	286	junction_6	38.4649912980044	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATATCCATTTTAGTTC	9744	False	NA	NA	False	AATAAA	-11	NA	44409807	44452804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291
ES.4662.19	chr11	+	3525	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	163.235114112555	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTTGTATTCCTGTGA	9744	False	NA	9	True	AATAAA	-15	NA	44409807	44456344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44424209_44424288_44433455_44433548_44439590_44439827_44442470_44442647_44446067_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.2	chr11	+	3321	10	NNC	ENSMUSG00000019189.14	novel	614	2	NA	NA	-262	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	142.614563001984	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9465	False	NA	10	True	AATAAA	-16	NA	44409528	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44409702_44415754_44415971_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.20	chr11	+	3579	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	114.851251625744	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTTGTATTCCTGTGA	9745	False	NA	9	True	AATAAA	-15	NA	44409808	44456344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452679_44454746
ES.4662.21	chr11	+	3538	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.341309435319	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCGTTGTATTCCTGTG	9745	False	NA	8	True	AATAAA	-14	NA	44409808	44456343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415129_44415225_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442575_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.22	chr11	+	3610	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	144.239355709658	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9746	False	NA	10	True	AATAAA	-16	NA	44409809	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44448704_44448766_44450798_44450947_44452291_44452649_44454746
ES.4662.23	chr11	+	3224	9	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	151.258677437032	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9746	False	NA	10	True	AATAAA	-16	NA	44409809	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44433455_44433548_44439590_44439822_44442465_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.24	chr11	+	3395	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.030305670647	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9747	False	NA	10	True	AATAAA	-16	NA	44409810	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439743_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.27	chr11	+	8633	10	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_6	119.769325613968	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9750	False	NA	12	True	AATAAA	-18	NA	44409813	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44447426_44447634_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.28	chr11	+	3033	13	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	137.867765751583	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9750	False	NA	12	True	AATAAA	-18	NA	44409813	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746_44454943_44455348_44455463_44455570
ES.4662.29	chr11	+	5154	9	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	10933	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	112.944676722721	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTTGTATTCCTGTGA	7958	False	NA	9	True	AATAAA	-15	NA	44422064	44456344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44424288_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.3	chr11	+	3596	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	114.851251625744	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9693	False	NA	10	True	AATAAA	-16	NA	44409756	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454752
ES.4662.30	chr11	+	838	1	Intergenic	novelGene_3615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44433548	44434386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_44433500_44434400
ES.4662.31	chr11	+	4442	1	Genic_Genomic	ENSMUSG00000019189.14	novel	NA	NA	NA	NA	4626	3566	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCAGAACTATTTTTG	NA	False	NA	NA	False	NA	NA	NA	44455471	44459913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_44455500_44459900
ES.4662.4	chr11	+	3600	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	-30	0	-30	0	multi-exon	FALSE	canonical	3	286	junction_6	37.2538588605261	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9697	False	NA	12	True	AATAAA	-18	NA	44409760	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.5	chr11	+	3552	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	109.554545077361	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9699	False	NA	10	True	AATAAA	-16	NA	44409762	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746_44455286_44455329
ES.4662.6	chr11	+	3463	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	114.049155527532	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCGTTGTATTCCTGTG	9721	False	NA	8	True	AATAAA	-14	NA	44409784	44456343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_44410102_44415754_44415971_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.7	chr11	+	3524	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	114.723842334538	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTTGTATTCCTGTGA	9728	False	NA	9	True	AATAAA	-15	NA	44409791	44456344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452333_44452649_44454746
ES.4662.8	chr11	+	3645	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	139.99887838984	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTTGTATTCCTGTGAT	9728	False	NA	10	True	AATAAA	-16	NA	44409791	44456345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44424209_44424288_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ES.4662.9	chr11	+	3461	12	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	108.467384746379	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9728	False	NA	12	True	AATAAA	-18	NA	44409791	44456347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746_44455463_44455570
ES.4663.1	chr11	-	899	1	Antisense	novelGene_ENSMUSG00000019189.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTTCTTTTGGTTCAA	NA	False	NA	NA	False	AATAAA	-16	NA	44410160	44409261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_44409300_44410200
ES.4664.1	chr11	-	4046	1	Intergenic	novelGene_3614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGACAGACAGACAGACA	NA	False	NA	NA	False	NA	NA	NA	44420483	44416437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44416400_44420500
ES.4665.1	chr11	-	180	2	Intergenic	novelGene_3616	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1739	False	NA	NA	False	NA	NA	NA	44494563	44488304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44488463_44494541
ES.4665.2	chr11	-	255	1	Intergenic	novelGene_3617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCTTTTTGTTTT	5761	False	NA	NA	False	NA	NA	NA	44490541	44490286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44490300_44490500
ES.4665.3	chr11	-	231	2	Intergenic	novelGene_3618	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCTACAGGAAGGGTT	1740	False	NA	NA	False	NA	NA	NA	44494562	44490311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44490522_44494541
ES.4665.4	chr11	-	176	2	Intergenic	novelGene_3619	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACTTGTGG	1741	False	NA	NA	False	NA	NA	NA	44494561	44490364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44490512_44494532
ES.4665.5	chr11	-	180	1	Intergenic	novelGene_3620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACCCT	1739	False	NA	NA	False	NA	NA	NA	44494563	44494383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44494400_44494600
ES.4666.1	chr11	-	185	1	Intergenic	novelGene_3621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAAGAAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	44639135	44638950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_44639000_44639100
ES.4667.1	chr11	+	2655	3	ISM	ENSMUSG00000057098.15	ENSMUST00000081265.12	5981	16	375039	1048	80218	-1048	3prime_fragment	FALSE	canonical	1	2	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAATCGAAAAGCACA	NA	False	NA	NA	False	AAAAAG	-19	NA	44883182	44897870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_44883316_44886832_44887028_44895543
ES.4668.1	chr11	+	3438	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-40	0	-40	0	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742750	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.10	chr11	+	3399	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_10	146.250266652296	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742780	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798727_45798872_45799767
ES.4668.11	chr11	+	3391	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-7	-8	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	144.874525363066	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45742783	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781621_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.12	chr11	+	3213	11	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-7	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	203.568882690847	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCCCCTACTTTATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	45742783	45801341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781621_45784697_45784945_45785886_45785957_45797007_45797295_45798720_45798872_45799767
ES.4668.13	chr11	+	3382	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	143.003149708132	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742783	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45742997_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.14	chr11	+	3352	11	NIC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	175.27866384703	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742785	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45743020_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.15	chr11	+	2078	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-5	1325	-5	-1325	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGTGGAAGAAGACTCT	NA	False	NA	3	True	AATAAA	-13	NA	45742785	45800127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.17	chr11	+	2191	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-5	1212	-5	-1212	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTGTTTCAGAAGCGA	NA	False	NA	NA	False	ATTAAA	-24	NA	45742785	45800240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.18	chr11	+	3352	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-3	103	-3	-103	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTATGTTGAAATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	45742787	45801349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.19	chr11	+	3372	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	149.795507992984	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742788	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797035_45797295_45798720_45798872_45799767
ES.4668.2	chr11	+	3492	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-39	-1	-39	1	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCCGCCTCTTTTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	45742751	45801453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.20	chr11	+	4188	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	149.789438990397	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742789	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45797929_45798872_45799767
ES.4668.21	chr11	+	4853	10	ISM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	6	861	6	-861	intron_retention	FALSE	canonical	3	378	junction_6	52.3006503276141	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATACATATGTGATTATG	NA	False	NA	NA	False	TATAAA	-26	NA	45742796	45800591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007
ES.4668.22	chr11	+	3056	9	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.804911762829	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGGCCCGCCTCTTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	45742797	45801451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45742997_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.23	chr11	+	3001	13	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	142.618956196807	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACGTGGGCCCGCCTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	45742797	45801448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767_45800326_45800711
ES.4668.25	chr11	+	3370	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	17	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	174.641356229804	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45742807	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798815_45799767
ES.4668.26	chr11	+	2102	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	24	1326	24	-1326	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGTGGAAGAAGACTC	NA	False	NA	2	True	AATAAA	-12	NA	45742814	45800126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.27	chr11	+	2512	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	25	861	25	-861	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATACATATGTGATTATG	NA	False	NA	NA	False	TATAAA	-26	NA	45742815	45800591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.28	chr11	+	3412	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	26	-8	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	173.386636220427	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45742816	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781621_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.29	chr11	+	5633	9	NIC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	26	-2	intron_retention	FALSE	canonical	2	10	junction_1	164.910913450263	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742816	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45743020_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45785957_45793037_45793113_45797007_45798872_45799767
ES.4668.30	chr11	+	3279	13	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.654871905627	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742817	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45742884_45742973_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.32	chr11	+	3399	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	149.789438990397	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742826	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798683_45798872_45799767
ES.4668.33	chr11	+	3340	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	42	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	148.752998441895	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45742832	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799775
ES.4668.34	chr11	+	177	1	Intergenic	novelGene_3622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	45759138	45759315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_45759100_45759300
ES.4668.35	chr11	+	177	1	Intergenic	novelGene_3623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45768724	45768901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_45768700_45768900
ES.4668.36	chr11	+	5224	10	NIC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	676	-8	intron_retention	FALSE	canonical	3	378	junction_5	48.3163443960992	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45773899	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45798872_45799767
ES.4668.38	chr11	+	3250	9	ISM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	34230	8	3797	-8	3prime_fragment	FALSE	canonical	3	124	junction_7	129.058852854037	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45777020	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.39	chr11	+	5013	5	ISM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	38652	8	8219	-8	intron_retention	FALSE	canonical	3	378	junction_1	43.3704968844029	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAACGTGGGCCCGCC	NA	False	NA	NA	False	ATTAAA	-10	NA	45781442	45801444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007
ES.4668.4	chr11	+	2252	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	-25	1225	-25	-1225	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCAAAAAGGCTGGT	NA	False	NA	NA	False	ATTAAA	-11	NA	45742765	45800227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4668.5	chr11	+	3320	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	-24	102	-24	-102	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATGTTGAAATTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	45742766	45801350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.6	chr11	+	3317	11	NIC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	148.897817311067	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742766	45801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45743020_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ES.4668.7	chr11	+	3301	13	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	143.654871905627	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742766	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767_45801304_45801422
ES.4668.9	chr11	+	3441	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	169.310414708977	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGGCCCGCCTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	45742776	45801450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45742997_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ES.4669.1	chr11	-	6324	1	Antisense	novelGene_ENSMUSG00000006169.21_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAACATAAGATCCCA	NA	False	NA	NA	False	AAAAAG	-37	NA	45801346	45795022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_45795000_45801300
ES.467.1	chr1	+	3470	25	NIC	ENSMUSG00000025983.12	novel	3807	28	NA	NA	55	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_10	2.18859099777815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGTAGACTCCTCTC	NA	False	NA	NA	False	AATAAA	-10	NA	54289935	54407886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_54290045_54299082_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072_54407193_54407459
ES.467.2	chr1	+	3816	7	FSM	ENSMUSG00000025983.12	ENSMUST00000161988.2	1204	7	96	-2708	57	2708	multi-exon	FALSE	canonical	2	2	junction_2	2.3392781412697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGTGGCCCAGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	54289937	54320828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_54290045_54299082_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869
ES.467.3	chr1	+	3602	27	NIC	ENSMUSG00000025983.12	novel	3807	28	NA	NA	92	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	2.12097164291727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATAGTAGACTCCTC	NA	False	NA	NA	False	AATAAA	-8	NA	54289972	54407884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_54290045_54299082_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072_54407193_54407459
ES.467.4	chr1	+	3686	2	ISM	ENSMUSG00000025983.12	ENSMUST00000161988.2	1204	7	26355	-2702	26316	2702	3prime_fragment	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAAGTGCTGTGTGGCCC	NA	False	NA	NA	False	AATAAA	-8	NA	54316196	54320822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_54316930_54317869
ES.467.5	chr1	+	2537	19	NIC	ENSMUSG00000025983.12	novel	3696	31	NA	NA	31008	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.04822012578407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGTAGACTCCTCTC	NA	False	NA	NA	False	AATAAA	-10	NA	54320888	54407886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344137_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54406917_54407018_54407116_54407193_54407459
ES.4670.1	chr11	+	209	1	Intergenic	novelGene_3624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTGGGGGGTGGGGGT	NA	False	NA	NA	False	NA	NA	NA	45815487	45815696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_45815500_45815700
ES.4671.1	chr11	-	6495	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-38	-4	-38	4	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCTTGGTCTCTGCT	NA	False	NA	-1	True	AATAAA	-19	NA	45835800	45819091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.2	chr11	-	4632	5	NNC	ENSMUSG00000044847.14	novel	6453	4	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.4111731915807	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGCTTGCTGCTTGGTCT	NA	False	NA	-6	True	AATAAA	-14	NA	45835800	45819096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_45821401_45823258_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.3	chr11	-	4038	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-34	2449	-34	362	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTAGCTACCTGAATA	NA	False	NA	NA	False	AATAAA	-21	NA	45835796	45821544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.4	chr11	-	3722	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-52	2783	-52	28	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGCTTCCCCGAAATG	NA	False	NA	NA	False	AATAAA	-20	NA	45835814	45821878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.5	chr11	-	2137	5	FSM	ENSMUSG00000044847.14	ENSMUST00000062458.6	2126	5	12	-23	12	23	multi-exon	FALSE	canonical	0	0	junction_1	59.4111731915807	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTATTGCTTCCCCG	NA	False	NA	NA	False	AATAAA	-15	NA	45835750	45821883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45822693_45824208_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.6	chr11	-	3559	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	10	2884	10	-73	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTCATGGTAATTATT	NA	False	NA	NA	False	AATGAA	-18	NA	45835752	45821979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.7	chr11	-	2395	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	15	4043	15	-1232	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	45835747	45823138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.8	chr11	-	1249	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	-80	5284	-80	-2473	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCTAGTCTCCCACACA	NA	False	NA	-2	True	AATAAA	-22	NA	45835842	45824379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ES.4671.9	chr11	-	1580	3	NIC	ENSMUSG00000044847.14	novel	6453	4	NA	NA	-21	-2480	intron_retention	FALSE	canonical	3	99	junction_2	16.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTATATCCTAGTCTC	NA	False	NA	-9	True	AATAAA	-15	NA	45835783	45824386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_45825332_45828185_45828326_45835288
ES.4672.1	chr11	-	1235	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	-4	1019	-4	-1019	multi-exon	FALSE	canonical	3	110	junction_3	12.8	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6297	False	NA	0	True	TATAAA	-19	NA	45846325	45838688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ES.4672.3	chr11	-	3570	4	NIC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	-3	-1025	intron_retention	FALSE	canonical	3	112	junction_2	12.8322510366134	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCTGGAGGAGTCATT	6298	False	NA	-6	True	TATAAA	-13	NA	45846324	45838694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_45839156_45841022_45843732_45844882_45845060_45846101
ES.4672.4	chr11	-	2409	5	NIC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	0	-1080	intron_retention	FALSE	canonical	3	110	junction_2	13.8270568090248	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGGCTCTTTTCAA	6301	False	NA	-61	True	AAAAAG	-20	NA	45846321	45838749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_45839156_45841022_45842459_45843561_45843732_45844882_45845060_45846101
ES.4672.5	chr11	-	1141	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	-13	1122	-13	-1122	multi-exon	FALSE	canonical	3	110	junction_3	12.8	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTTTAAAAAAAAA	6288	False	NA	-103	True	NA	NA	NA	45846334	45838791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ES.4672.6	chr11	-	932	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	-4	1322	-4	-1322	multi-exon	FALSE	canonical	3	110	junction_3	12.8	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCTCTGCAGTTCTAGC	6297	False	NA	NA	False	NA	NA	NA	45846325	45838991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ES.4673.1	chr11	+	2857	5	FSM	ENSMUSG00000040489.6	ENSMUST00000049038.4	2997	5	150	-10	150	10	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTTCTGTTGAGAGG	NA	False	NA	NA	False	AATAAA	-21	NA	45871286	45908831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45872201_45874145_45874386_45875543_45875724_45882445_45882939_45907801
ES.4674.1	chr11	-	133	2	Intergenic	novelGene_3625	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	3599	False	NA	NA	False	NA	NA	NA	45941336	45934558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_45934629_45941273
ES.4675.1	chr11	-	968	1	FSM	ENSMUSG00000069899.4	ENSMUST00000093169.3	958	1	-23	13	-13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGACA	1774	False	NA	NA	False	AATAAA	-17	NA	45943161	45942193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_45942200_45943200
ES.4676.1	chr11	+	6232	23	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	-1512	4	intron_retention	TRUE	canonical	0	0	junction_1	107.355899959892	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGGATGGCTCTTT	NA	False	NA	19	True	ATTAAA	-24	NA	45945306	46038174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45945371_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.10	chr11	+	6617	25	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_3	162.997933695151	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946825	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45973848_45973967_45974101_45974225_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.11	chr11	+	6335	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_3	184.438891087142	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGTTTGGATGGC	NA	False	NA	14	True	ATTAAA	-19	NA	45946828	46038169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45973848_45973967_45974101_45974225_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028422_46030832_46031058_46033745_46033899_46034618
ES.4676.12	chr11	+	6296	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	10	2	intron_retention	FALSE	canonical	2	5	junction_22	106.360188366801	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTTTGGATGGCTCT	NA	False	NA	17	True	ATTAAA	-22	NA	45946828	46038172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033820_46034618
ES.4676.13	chr11	+	6241	22	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	17	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	109.503414250088	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTCTCTGTTTGGA	NA	False	NA	10	True	ATTAAA	-15	NA	45946835	46038165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45990720_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.14	chr11	+	6290	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	24	2	intron_retention	FALSE	canonical	3	11	junction_2	107.666845685494	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTTTGGATGGCTCT	NA	False	NA	17	True	ATTAAA	-22	NA	45946842	46038172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45951749_45951836_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.15	chr11	+	7074	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	26	0	intron_retention	FALSE	canonical	3	430	junction_19	40.3515728702931	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946844	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.16	chr11	+	6364	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	26	-3	intron_retention	FALSE	canonical	1	6	junction_8	106.261032485071	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946844	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009329_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.19	chr11	+	5351	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	51	981	-15	-981	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTCTAGAAAAACAAAAAT	NA	False	NA	NA	False	NA	NA	NA	45946869	46037189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.2	chr11	+	6536	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	-148	-5	-148	5	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGGATGGCTCTTTT	NA	False	NA	20	True	ATTAAA	-25	NA	45946670	46038175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.21	chr11	+	6387	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_3	166.052352416071	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946869	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45966375_45966440_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013925_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.23	chr11	+	5716	19	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_9	116.591946972188	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946869	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46022572_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.24	chr11	+	6497	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_14	140.43281732371	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946869	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46024706_46024872_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.25	chr11	+	6303	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-5	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	107.252116664081	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTCTGTTTGGATGG	NA	False	NA	13	True	ATTAAA	-18	NA	45946879	46038168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030584_46030828_46031058_46033745_46033899_46034618
ES.4676.26	chr11	+	6236	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-5	-5	intron_retention	FALSE	canonical	0	0	junction_5	107.40150205946	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTCTCTGTTTGGA	NA	False	NA	10	True	ATTAAA	-15	NA	45946879	46038165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003664_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.27	chr11	+	7681	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-2	0	intron_retention	FALSE	canonical	3	430	junction_19	39.9736874907729	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946882	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.28	chr11	+	6562	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_13	139.503846726238	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946883	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46020376_46020621_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.29	chr11	+	6384	23	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	1	-4	intron_retention	FALSE	canonical	1	2	junction_1	168.022455209253	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTCTCTGTTTGGAT	NA	False	NA	11	True	ATTAAA	-16	NA	45946885	46038166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45947125_45947269_45951749_45951836_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.3	chr11	+	3772	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	-39	2650	-39	836	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGGGTCGCCACTGGAC	NA	False	NA	NA	False	NA	NA	NA	45946779	46035520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.31	chr11	+	6206	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	109.442122746649	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946886	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.33	chr11	+	6428	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_3	140.440812900547	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTCTCTGTTTGGAT	NA	False	NA	11	True	ATTAAA	-16	NA	45946887	46038166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45973848_45973967_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.35	chr11	+	6457	24	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	3	0	intron_retention	FALSE	canonical	1	2	junction_1	140.021075918318	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946887	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45947125_45947269_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.36	chr11	+	6302	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	3	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	107.337509329642	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTCTCTGTTTGGA	NA	False	NA	10	True	ATTAAA	-15	NA	45946887	46038165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951829_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.37	chr11	+	6436	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	6	-3	intron_retention	TRUE	canonical	0	0	junction_19	140.148908116063	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946890	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030083_46030212_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.38	chr11	+	6903	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	6	-4	intron_retention	FALSE	canonical	1	1	junction_21	142.878206239377	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTCTCTGTTTGGAT	NA	False	NA	11	True	ATTAAA	-16	NA	45946890	46038166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030078_46030605_46030832_46031058_46033590_46033899_46034618
ES.4676.39	chr11	+	6031	22	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	109.442122746649	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45946890	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022543_46027139_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.40	chr11	+	6329	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_21	107.276425205908	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946890	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033727_46033899_46034618
ES.4676.42	chr11	+	6279	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	13	-5	intron_retention	FALSE	canonical	0	0	junction_12	106.970915951506	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTCTCTGTTTGGA	NA	False	NA	10	True	ATTAAA	-15	NA	45946897	46038165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018231_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.43	chr11	+	2721	10	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	105	22455	39	-12760	5prime_fragment	FALSE	canonical	3	440	junction_1	20.1665901437177	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAGCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45946923	46015715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919
ES.4676.44	chr11	+	6374	23	NIC	ENSMUSG00000011256.17	novel	816	4	NA	NA	174	0	intron_retention	FALSE	canonical	2	3	junction_1	106.772765973908	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45947058	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947269_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.45	chr11	+	158	1	Intergenic	novelGene_3626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	45950103	45950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_45950100_45950300
ES.4676.46	chr11	+	6199	23	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	4027	0	intron_retention	FALSE	canonical	0	0	junction_1	107.355899959892	780	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45950911	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45950947_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.47	chr11	+	6245	22	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	4847	3	4781	-3	3prime_fragment	FALSE	canonical	3	430	junction_19	39.3885234848036	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	NA	False	NA	12	True	ATTAAA	-17	NA	45951665	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.48	chr11	+	6151	21	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	8941	6	8875	-6	3prime_fragment	FALSE	canonical	3	430	junction_18	40.3582395552631	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAATGTTCTCTGTTTGG	NA	False	NA	9	True	ATTAAA	-14	NA	45955759	46038164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.49	chr11	+	6354	21	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	11987	0	intron_retention	FALSE	canonical	0	0	junction_1	112.4877326645	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45958871	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45959219_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.5	chr11	+	6418	23	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-7	-8	intron_retention	FALSE	canonical	0	0	junction_19	107.318412844848	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAATGTTCTCTGTTT	NA	False	NA	7	True	ATTAAA	-12	NA	45946811	46038162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029839_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.50	chr11	+	6449	21	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	12750	0	intron_retention	FALSE	canonical	1	2	junction_1	112.080774444148	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45959634	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45960077_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.51	chr11	+	6197	21	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	12990	0	intron_retention	FALSE	canonical	0	0	junction_17	149.818047978206	779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45959874	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45960077_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030531_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.52	chr11	+	6018	20	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-34043	0	intron_retention	FALSE	canonical	1	6	junction_5	114.15150063382	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	3451	False	NA	15	True	ATTAAA	-20	NA	45984688	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009329_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.53	chr11	+	6890	19	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	42896	3	-29017	-3	3prime_fragment	FALSE	canonical	3	430	junction_16	42.124008579021	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCTCTGTTTGGATG	8477	False	NA	12	True	ATTAAA	-17	NA	45989714	46038167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.54	chr11	+	5948	18	ISM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	56668	0	-15245	0	3prime_fragment	FALSE	canonical	3	430	junction_15	43.2599769479404	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	46003486	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.55	chr11	+	5738	17	NNC	ENSMUSG00000011256.17	novel	816	4	NA	NA	-9773	0	intron_retention	FALSE	canonical	0	0	junction_1	124.605627882532	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	46008958	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46009105_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.56	chr11	+	4560	1	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-7555	-12739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	554	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46011176	46015736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_46011200_46015700
ES.4676.57	chr11	+	5576	15	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-6585	0	intron_retention	FALSE	canonical	0	0	junction_13	175.648942554199	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	46012146	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033710_46033820_46034618
ES.4676.58	chr11	+	4672	9	ISM	ENSMUSG00000011256.17	ENSMUST00000151565.8	1747	12	6517	-3488	300	2	3prime_fragment	FALSE	canonical	3	430	junction_6	57.8402973712964	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTTTGGATGGCTCT	NA	False	NA	17	True	ATTAAA	-22	NA	46025248	46038172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.59	chr11	+	4262	6	ISM	ENSMUSG00000011256.17	ENSMUST00000151565.8	1747	12	9634	-3484	3417	-2	3prime_fragment	FALSE	canonical	3	430	junction_3	69.332820510924	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTCTCTGTTTGGATGG	NA	False	NA	13	True	ATTAAA	-18	NA	46028365	46038168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.6	chr11	+	6311	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	105.069677124467	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946816	46038170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618_46035632_46035705
ES.4676.7	chr11	+	3084	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	-1	3300	-1	186	multi-exon	FALSE	canonical	3	430	junction_20	39.4256282802095	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCCTGTGCAATATACAG	NA	False	NA	NA	False	NA	NA	NA	45946817	46034870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ES.4676.8	chr11	+	6340	24	NNC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	2	2	intron_retention	FALSE	non_canonical	0	0	junction_23	105.069677124467	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTTTGGATGGCTCT	NA	False	NA	17	True	ATTAAA	-22	NA	45946820	46038172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618_46037218_46037260
ES.4676.9	chr11	+	6103	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	5	-992	intron_retention	FALSE	canonical	3	430	junction_19	40.3515728702931	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAACCCTCTAGA	NA	False	NA	NA	False	NA	NA	NA	45946823	46037178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46030605_46030832_46031058_46033745_46033899_46034618
ES.4677.1	chr11	-	7660	4	Antisense	novelGene_ENSMUSG00000011256.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAAACACACCGATTT	NA	False	NA	NA	False	NA	NA	NA	46032620	46023732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_46027289_46028190_46028268_46028365_46030603_46030830
ES.4678.1	chr11	+	220	1	Intergenic	novelGene_3627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACAGGCACATCCCAGG	NA	False	NA	NA	False	NA	NA	NA	46043742	46043962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_46043700_46044000
ES.4679.1	chr11	-	2987	6	FSM	ENSMUSG00000020411.3	ENSMUST00000020679.3	3444	6	121	336	121	-336	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGACCTTCCATGTAC	970	False	NA	NA	False	AATAAA	-28	NA	46057214	46039317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_46041602_46042087_46042249_46045430_46045522_46047592_46047650_46052680_46052921_46057060
ES.468.1	chr1	+	7612	3	Antisense	novelGene_ENSMUSG00000041303.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGGCCAAGAA	NA	False	NA	NA	False	NA	NA	NA	54424599	54439143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_54426329_54432915_54435786_54436130
ES.4680.1	chr11	+	1491	1	Intergenic	novelGene_3630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	1545	False	NA	NA	False	NA	NA	NA	46126552	46128043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_46126600_46128000
ES.4681.1	chr11	-	6385	32	NNC	ENSMUSG00000020340.17	novel	6298	31	NA	NA	-2	13112	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.5248004310576	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCATCATTTGGCCCAATC	NA	False	NA	NA	False	NA	NA	NA	46203187	46071564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46071592_46084687_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.10	chr11	-	6361	31	FSM	ENSMUSG00000020340.17	ENSMUST00000165599.9	6659	31	285	13	147	-8	multi-exon	FALSE	canonical	1	5	junction_30	31.8060266825854	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTAAACCAGCATCTTCG	NA	False	NA	-8	True	ATTAAA	-14	NA	46202900	46084689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46202761
ES.4681.12	chr11	-	4149	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-63	2212	1	4	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGTGTGTGCTTTCTTT	NA	False	NA	NA	False	AATGAA	-22	NA	46203184	46086893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.13	chr11	-	3971	30	NIC	ENSMUSG00000020340.17	novel	6298	31	NA	NA	-25	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	32.2882749487745	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGTGTGTGCTTTCTTT	NA	False	NA	NA	False	AATGAA	-22	NA	46203146	46086893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46203053
ES.4681.18	chr11	-	3363	25	NNC	ENSMUSG00000020340.17	novel	6659	31	NA	NA	-6201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	35.030913926924	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGCAGTGTGTGCTTT	NA	False	NA	NA	False	AATGAA	-18	NA	46167697	46086897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46087295_46089817_46089966_46091472_46091712_46096537_46096613_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ES.4681.2	chr11	-	3317	25	NNC	ENSMUSG00000020340.17	novel	6659	31	NA	NA	-6219	5728	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.8788433944287	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACAAAAACAGAAACTAAG	NA	False	NA	NA	False	AAAACA	-16	NA	46167715	46078948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46078961_46086898_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ES.4681.20	chr11	-	3967	30	NIC	ENSMUSG00000020340.17	novel	6298	31	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	32.3128288155681	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGCAGTGTGTGCTTT	NA	False	NA	NA	False	AATGAA	-18	NA	46203135	46086897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.24	chr11	-	2334	16	NNC	ENSMUSG00000020340.17	novel	3074	22	NA	NA	15400	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.8852620682652	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	46146096	46086916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46145909
ES.4681.26	chr11	-	2226	2	Intergenic	novelGene_3628	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGGTTTTTTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	46097377	46094509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46095418_46096059
ES.4681.27	chr11	-	3121	1	Intergenic	novelGene_3629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGGTTTTTTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	46097630	46094509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46094500_46097600
ES.4681.28	chr11	-	5420	29	NNC	ENSMUSG00000020340.17	novel	362	2	NA	NA	22	-7635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.8256898808933	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46203163	46094532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46096613_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.29	chr11	-	5387	21	NNC	ENSMUSG00000020340.17	novel	6659	31	NA	NA	-4046	-7635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0199931082004	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	860	False	NA	NA	False	NA	NA	NA	46165542	46094532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46097535_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464
ES.4681.3	chr11	-	6518	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-22	-198	-22	193	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGGCTTTAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	46203143	46084483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.30	chr11	-	2915	9	NNC	ENSMUSG00000020340.17	novel	6659	31	NA	NA	15493	-40511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2898476990366	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACCCTGGTTGGCTGTAT	NA	False	NA	NA	False	NA	NA	NA	46146003	46127408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46129382_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46145909
ES.4681.31	chr11	-	3967	17	NNC	ENSMUSG00000020340.17	novel	6659	31	NA	NA	-6226	-40512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0487909288322	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTACCCTGGTTGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	46167722	46127409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46129382_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ES.4681.33	chr11	-	4489	24	NNC	ENSMUSG00000020340.17	novel	362	2	NA	NA	-6	-40829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4875840264987	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTAATTTTGCTACCG	NA	False	NA	-6	True	NA	NA	NA	46203191	46127726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46129382_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.34	chr11	-	5077	16	ISM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	35418	43048	-6207	-40832	internal_fragment	FALSE	canonical	3	87	junction_4	15.587174214719	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAACTGTAATTTTGCTA	NA	False	NA	-9	True	NA	NA	NA	46167703	46127729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605
ES.4681.35	chr11	-	1855	12	ISM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-33	72354	31	25368	5prime_fragment	FALSE	canonical	3	40	junction_6	32.8296378896713	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGAGCTCGTGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	46203154	46157035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.36	chr11	-	248	1	Intergenic	novelGene_3631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGAAACTGTGGT	5284	False	NA	NA	False	AATAAA	-42	NA	46190775	46190527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46190500_46190800
ES.4681.4	chr11	-	6361	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	-61	-2	3	2	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCTTCGTCCTGACTTC	NA	False	NA	2	True	ATTAAA	-24	NA	46203182	46084679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ES.4681.5	chr11	-	6403	32	NNC	ENSMUSG00000020340.17	novel	6298	31	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	38.758034311937	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCATCTTCGTCCTGACT	NA	False	NA	0	True	ATTAAA	-22	NA	46203147	46084681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180454_46180549_46182339_46182480_46203053
ES.4682.1	chr11	+	1223	3	NNC	ENSMUSG00000020397.16	novel	1193	3	NA	NA	0	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	268	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGTTTAGATTTATT	NA	False	NA	13	True	AATAAA	-26	NA	46327751	46332429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46327837_46330704_46330803_46331389
ES.4682.10	chr11	+	3968	2	FSM	ENSMUSG00000020397.16	ENSMUST00000133635.2	740	2	-2680	-548	1	-1	multi-exon	FALSE	canonical	3	536	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAATTGTCATTCTTGG	NA	False	NA	11	True	AATAAA	-13	NA	46327798	46332353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46330803_46331389
ES.4682.11	chr11	+	1072	3	NNC	ENSMUSG00000020397.16	novel	1193	3	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	264	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACGAATTGTCATTCTT	NA	False	NA	9	True	AATAAA	-11	NA	46327808	46332351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46327837_46330720_46330803_46331389
ES.4682.12	chr11	+	1387	3	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_1	268	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAATTGTCATTCTTGGAA	NA	False	NA	13	True	AATAAA	-15	NA	46327811	46332355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46328063_46330632_46330803_46331389
ES.4682.13	chr11	+	1330	3	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	10	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	268	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGTGAAATTATAAAATG	NA	False	NA	1	True	AATAAA	-14	NA	46327814	46332417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46328019_46330704_46330803_46331389
ES.4682.15	chr11	+	1335	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	29	1183	-2	11	multi-exon	FALSE	canonical	3	262	junction_1	137	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTTGGAAAAAAAGTTAT	NA	False	NA	23	True	AATAAA	-25	NA	46327829	46332365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46328019_46330632_46330803_46331389
ES.4682.16	chr11	+	3932	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	34	-1419	3	1419	multi-exon	FALSE	canonical	3	262	junction_1	137	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAATAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46327834	46334967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46328019_46330632_46330803_46331389
ES.4682.17	chr11	+	4109	1	NIC	ENSMUSG00000020397.16	novel	2390	2	NA	NA	420	6	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCATTCTTGGAAAAAAA	NA	False	NA	18	True	AATAAA	-20	NA	46328251	46332360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_46328300_46332400
ES.4682.2	chr11	+	1315	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	-25	-97	2	97	multi-exon	FALSE	canonical	3	177	junction_1	179.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATATAGAAAGTTTA	NA	False	NA	35	True	TATAAA	-18	NA	46327753	46332451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46327837_46330632_46330803_46331389
ES.4682.3	chr11	+	2404	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	-15	-1196	12	2	multi-exon	FALSE	canonical	3	177	junction_1	179.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGGAATTTTGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	46327763	46333550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46327837_46330632_46330803_46331389
ES.4682.4	chr11	+	2568	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-25	4	0	-4	multi-exon	FALSE	canonical	3	262	junction_1	137	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTATCCAGGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	46327775	46333544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46328019_46330632_46330803_46331389
ES.4682.5	chr11	+	1518	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-18	1047	4	147	multi-exon	FALSE	canonical	3	262	junction_1	137	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACAGCTTTTCTCCTCC	NA	False	NA	85	True	AATATA	-40	NA	46327782	46332501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46328019_46330632_46330803_46331389
ES.4682.6	chr11	+	1280	4	NNC	ENSMUSG00000020397.16	novel	1193	3	NA	NA	4	97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	252.672823143993	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATATAGAAAGTTTA	NA	False	NA	35	True	TATAAA	-18	NA	46327782	46332451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46327837_46328736_46328829_46330730_46330803_46331389
ES.4682.7	chr11	+	1503	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	6	-316	-3	316	multi-exon	FALSE	canonical	3	177	junction_1	179.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGTCTCAACATAGCTT	NA	False	NA	NA	False	NA	NA	NA	46327784	46332670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46327837_46330632_46330803_46331389
ES.4682.8	chr11	+	2435	2	NNC	ENSMUSG00000020397.16	novel	2390	2	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTATCCAGGAATTTTG	NA	False	NA	NA	False	NA	NA	NA	46327790	46333544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_46328071_46331389
ES.4682.9	chr11	+	1267	2	FSM	ENSMUSG00000020397.16	ENSMUST00000128940.2	702	2	-11	-554	-4	77	multi-exon	FALSE	canonical	3	24	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTAGATTTATTCC	NA	False	NA	15	True	AATAAA	-28	NA	46327793	46332431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46328019_46331389
ES.4683.1	chr11	+	242	1	Intergenic	novelGene_3634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	46356686	46356928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_46356700_46356900
ES.4684.1	chr11	-	176	1	Intergenic	novelGene_3632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	46300004	46299828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46299800_46300000
ES.4684.2	chr11	-	172	2	Intergenic	novelGene_3633	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	216	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGAAAGAAC	3952	False	NA	NA	False	NA	NA	NA	46359893	46299830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46299954_46359844
ES.4685.1	chr11	-	2819	1	Antisense	novelGene_ENSMUSG00000086981.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAGTTTAAAAGATAGAT	2206	False	NA	NA	False	NA	NA	NA	46449147	46446328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_46446300_46449100
ES.4686.1	chr11	+	218	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	658	-63	658	63	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	46619302	46619520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_46619300_46619500
ES.4687.1	chr11	-	177	1	Intergenic	novelGene_3635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4266	False	NA	NA	False	NA	NA	NA	46694796	46694619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46694600_46694800
ES.4688.1	chr11	-	182	1	Intergenic	novelGene_3636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46785187	46785005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_46785000_46785200
ES.4689.1	chr11	-	174	1	Intergenic	novelGene_3637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAATCACCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	48573936	48573762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48573800_48573900
ES.469.1	chr1	-	5210	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-25	-603	-25	603	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTTGCCGTAATCAC	6675	False	NA	NA	False	AATAAA	-34	NA	54478155	54434559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.11	chr1	-	5137	18	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0691894081759	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTCACCTTTTAAACT	6691	False	NA	-8	True	AATAAA	-17	NA	54478139	54435164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54437710_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.15	chr1	-	6635	11	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	1383	-3	intron_retention	FALSE	canonical	3	130	junction_9	25.2041663222571	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTTCACCTTTTAAAC	NA	False	NA	-9	True	AATAAA	-16	NA	54466687	54435165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558
ES.469.16	chr1	-	3663	18	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-9	-924	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	46.7200304545571	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCAGAACGCTGCCT	6691	False	NA	NA	False	NA	NA	NA	54478139	54436086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473216_54473398_54476990_54477103_54477971
ES.469.18	chr1	-	3059	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-47	1570	-47	-1570	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATTGCCTTCTGAATC	6653	False	NA	0	True	AATAAA	-23	NA	54478177	54436732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.19	chr1	-	3085	18	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-44	-1571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	46.8679216108904	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATATTGCCTTCTGAAT	6656	False	NA	-1	True	AATAAA	-22	NA	54478174	54436733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477133_54477971
ES.469.2	chr1	-	4736	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	-61	-93	-61	93	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCATTTTGTGTGTAG	6639	False	NA	87	True	GATAAA	-20	NA	54478191	54435069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.20	chr1	-	3662	17	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	10	-1576	intron_retention	FALSE	canonical	3	130	junction_10	22.7643327104047	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACAATATTGCCTTC	6710	False	NA	-6	True	AATAAA	-17	NA	54478120	54436738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.22	chr1	-	2913	18	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-32	-1576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.1687891700184	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACAATATTGCCTTC	6668	False	NA	-6	True	AATAAA	-17	NA	54478162	54436738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54445120_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.23	chr1	-	2938	17	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-34	-1576	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	48.3017856812768	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACAATATTGCCTTC	6666	False	NA	-6	True	AATAAA	-17	NA	54478164	54436738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.24	chr1	-	4178	15	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	4835	-1576	intron_retention	FALSE	canonical	3	130	junction_11	24.623387754121	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACAATATTGCCTTC	9873	False	NA	-6	True	AATAAA	-17	NA	54473295	54436738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54469782_54473212
ES.469.25	chr1	-	3715	17	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-9	-1578	intron_retention	FALSE	canonical	3	130	junction_10	23.1853941092232	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGGACAATATTGCCT	6691	False	NA	-8	True	AATAAA	-15	NA	54478139	54436740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.26	chr1	-	2770	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	8	1804	8	-1804	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACTGTCATCACTGCTT	6708	False	NA	NA	False	GATAAA	-3	NA	54478122	54436966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.3	chr1	-	4348	19	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-21	91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.5715419104814	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCATTTTGTGTGT	6679	False	NA	85	True	GATAAA	-18	NA	54478151	54435071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54435792_54436137_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.4	chr1	-	4505	17	NIC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	48.3017856812768	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6675	False	NA	-6	True	AATAAA	-19	NA	54478155	54435162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.5	chr1	-	6556	2	ISM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	35286	0	20369	0	intron_retention	FALSE	canonical	3	216	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	NA	False	NA	-6	True	AATAAA	-19	NA	54442844	54435162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54437162_54438287
ES.469.6	chr1	-	4849	19	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.266326045639	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6664	False	NA	-6	True	AATAAA	-19	NA	54478166	54435162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54437162_54437478_54437710_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.7	chr1	-	4282	19	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-47	-1	at_least_one_novel_splicesite	FALSE	non_canonical	3	40	junction_1	37.832966224357	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACCTTTTAAACTT	6653	False	NA	-7	True	AATAAA	-18	NA	54478177	54435163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54435782_54436127_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.8	chr1	-	5393	18	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-32	-1	intron_retention	FALSE	non_canonical	3	40	junction_1	36.9037839978017	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACCTTTTAAACTT	6668	False	NA	-7	True	AATAAA	-18	NA	54478162	54435163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54435782_54436127_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ES.469.9	chr1	-	4275	19	NNC	ENSMUSG00000041303.8	novel	4582	18	NA	NA	-6	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	64.760241575282	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACCTTTTAAACTT	6694	False	NA	-7	True	AATAAA	-18	NA	54478136	54435163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54435782_54436127_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469786_54473212_54473398_54476990_54477133_54477971
ES.4690.1	chr11	-	176	1	Intergenic	novelGene_3638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGCTTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48621843	48621667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48621700_48621800
ES.4691.1	chr11	-	91	2	Intergenic	novelGene_3639	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAGATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	48642483	48641546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48641598_48642443
ES.4692.1	chr11	+	250	1	Intergenic	novelGene_3640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	ATTAAA	-28	NA	48664787	48665037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_48664800_48665000
ES.4693.1	chr11	+	161	1	Intergenic	novelGene_3643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48684497	48684658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_48684500_48684700
ES.4694.1	chr11	-	2319	1	Intergenic	novelGene_3641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCTGTTCGAACTCAG	NA	False	NA	NA	False	AATAAA	-25	NA	48685450	48683131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48683100_48685400
ES.4694.2	chr11	-	2590	1	Intergenic	novelGene_3642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAAAAGCAAAACGAATT	NA	False	NA	NA	False	NA	NA	NA	48685853	48683263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48683300_48685900
ES.4695.1	chr11	+	1860	7	FSM	ENSMUSG00000020372.16	ENSMUST00000139959.8	1542	7	-307	-11	-282	6	multi-exon	FALSE	canonical	3	5433	junction_6	484.72730019626	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAGTCCTGGAAGCTGA	NA	False	NA	34	True	AATAAA	-26	NA	48690876	48696926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48691400_48692489_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.10	chr11	+	1226	9	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2887.39043082158	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691154	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692037_48692134_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.13	chr11	+	5549	2	FSM	ENSMUSG00000020372.16	ENSMUST00000142269.2	4456	2	18	-1111	-7	-3	multi-exon	FALSE	canonical	3	6843	junction_1	0	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691176	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48694796_48694982
ES.4695.14	chr11	+	5194	3	NIC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	6336	junction_1	253.5	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691176	48696915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48694327_48694684_48694796_48694982
ES.4695.15	chr11	+	2959	5	NIC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-6	-3	intron_retention	FALSE	canonical	3	6336	junction_2	199.843688917113	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691177	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371
ES.4695.17	chr11	+	1102	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2540.33371582458	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATGTGAGTCCTG	NA	False	NA	26	True	AATAAA	-18	NA	48691179	48696918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696380_48696483_48696806
ES.4695.18	chr11	+	3977	4	NIC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	5433	junction_3	652.991577281055	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691179	48696915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.2	chr11	+	1714	7	ISM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-292	349	-264	-3	intron_retention	FALSE	canonical	1	1907	junction_2	1776.69449634239	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48690894	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371
ES.4695.20	chr11	+	2630	6	NIC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	5433	junction_5	527.977499520576	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGGCTTCTATATGT	NA	False	NA	18	True	AATAAA	-10	NA	48691180	48696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.23	chr11	+	1099	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2301.09798104456	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691181	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692489_48692666_48693107_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.25	chr11	+	1247	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	200	0	141	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGGTTTGGTCTCCT	NA	False	NA	NA	False	AGTAAA	-42	NA	48691186	48697061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.26	chr11	+	1476	7	NNC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-4	-3	intron_retention	FALSE	canonical	2	154	junction_2	2372.13163045861	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691196	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692489_48693248_48694280_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.28	chr11	+	1055	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2301.09798104456	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGGCTTCTATATGT	NA	False	NA	18	True	AATAAA	-10	NA	48691216	48696910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692489_48692666_48693114_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.3	chr11	+	1403	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-286	330	-258	11	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGGAAGCTGAGTCCC	NA	False	NA	39	True	AATAAA	-31	NA	48690900	48696931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.30	chr11	+	1003	8	NNC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	66	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2920.79001054754	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGAAACTGGCTTCT	NA	False	NA	12	True	AATAAA	-4	NA	48691266	48696904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48691400_48692489_48692661_48693099_48693248_48694236_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.31	chr11	+	3571	4	Fusion	ENSMUSG00000064725.3_ENSMUSG00000020372.16_ENSMUSG00000064500.4	novel	637	6	NA	NA	-144	-3	intron_retention	FALSE	canonical	3	6336	junction_1	227.934201031789	1065	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691548	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_48694327_48694684_48694796_48694982_48695124_48696371
ES.4695.32	chr11	+	1681	7	ISM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	507	349	493	-3	3prime_fragment	FALSE	canonical	1	1907	junction_1	1751.95706441555	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48691693	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.33	chr11	+	402	3	ISM	ENSMUSG00000020372.16	ENSMUST00000125166.2	637	6	960	-12	960	-3	3prime_fragment	FALSE	canonical	3	5433	junction_2	679.5	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCTTCTATATGTGA	NA	False	NA	20	True	AATAAA	-12	NA	48694938	48696912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_48695124_48696371_48696483_48696806
ES.4695.5	chr11	+	3652	5	NIC	ENSMUSG00000020372.16	novel	1542	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	5433	junction_4	565.573602637181	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691146	48696915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4695.6	chr11	+	1475	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-39	11	-11	-11	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGCAACACAACCCAC	NA	False	NA	NA	False	AATAAA	-12	NA	48691147	48697250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ES.4696.10	chr11	-	2938	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-30	-26	intron_retention	FALSE	canonical	0	0	junction_1	15.2397506541282	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAAAAGTGTTT	NA	False	NA	-51	True	NA	NA	NA	48707810	48697256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698400_48698497_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ES.4696.11	chr11	-	1827	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	197	-273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.2635577664907	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGGAGCCTAAGTCTTC	NA	False	NA	-12	True	AATAAA	-21	NA	48706861	48697503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698674_48698951_48699017_48699291_48699315_48699876_48700108_48703126_48703223_48706530_48706581_48706669
ES.4696.12	chr11	-	3113	6	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	122	-273	intron_retention	FALSE	canonical	0	0	junction_2	20.8576125191739	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGGAGCCTAAGTCTTC	NA	False	NA	-12	True	AATAAA	-21	NA	48708058	48697503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698674_48698951_48699017_48699291_48699315_48699876_48700108_48703126_48703223_48706530
ES.4696.13	chr11	-	3583	4	NIC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-1727	-277	intron_retention	FALSE	canonical	3	39	junction_3	2.86744175568088	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGTAGGAGCCTAAGT	NA	False	NA	-16	True	AATAAA	-17	NA	48704949	48697507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_48698674_48698951_48699315_48699876_48700108_48703126
ES.4696.14	chr11	-	2192	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	962	278	-160	-278	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTATGTAGGAGCCTAAG	NA	False	NA	-17	True	AATAAA	-16	NA	48707218	48697508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ES.4696.2	chr11	-	3986	4	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	5912	0	954	0	3prime_fragment	FALSE	canonical	3	37	junction_2	3.68178700572909	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48702268	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876
ES.4696.3	chr11	-	5199	5	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	1680	0	558	0	3prime_fragment	FALSE	canonical	3	37	junction_2	3.39116499156263	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48706500	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126
ES.4696.4	chr11	-	1849	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	14.5306190125847	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48706692	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698403_48698497_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ES.4696.5	chr11	-	2930	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	13	0	intron_retention	FALSE	canonical	1	1	junction_1	14.8847423745107	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48707767	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698403_48698491_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ES.4696.6	chr11	-	2557	7	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	15.2397506541282	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48708206	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669_48706957_48707857
ES.4696.7	chr11	-	2220	6	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5481116747501	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48707031	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698674_48698951_48699017_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ES.4696.8	chr11	-	6022	4	NIC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-53	0	intron_retention	FALSE	canonical	3	39	junction_3	2.86744175568088	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48707111	48697230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_48698674_48698951_48699315_48699876_48700108_48703126
ES.4696.9	chr11	-	2337	5	NNC	ENSMUSG00000040365.15	novel	3432	6	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.6583312489577	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTGTGGACTCTTT	NA	False	NA	-27	True	AATAAA	-16	NA	48707098	48697232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_48698674_48698951_48699083_48699867_48700108_48703126_48703223_48706669
ES.4697.1	chr11	+	1538	1	Genic_Genomic	ENSMUSG00000040350.17	novel	NA	NA	NA	NA	-505	-13421	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATTGGGGG	383	False	NA	NA	False	NA	NA	NA	48716461	48717999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_48716500_48718000
ES.4698.1	chr11	+	112	1	Intergenic	novelGene_3644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	7966	False	NA	NA	False	NA	NA	NA	48724044	48724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_48724000_48724200
ES.4699.1	chr11	+	3480	6	NIC	ENSMUSG00000040350.17	novel	2161	7	NA	NA	-199	1	intron_retention	TRUE	canonical	1	1	junction_1	1.67332005306815	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGGGTGTCTGGACT	NA	False	NA	NA	False	AATACA	-14	NA	48728092	48742015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_48728873_48729663_48729760_48736262_48736494_48738341_48738968_48739399_48739436_48740304
ES.4699.2	chr11	+	2883	7	FSM	ENSMUSG00000040350.17	ENSMUST00000046903.6	2161	7	-92	-630	-92	-2	multi-exon	FALSE	canonical	1	1	junction_1	1.5723301886761	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCTAGGGGTGTCTGG	NA	False	NA	NA	False	AATACA	-11	NA	48728199	48742012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_48728873_48729663_48729760_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
ES.4699.3	chr11	+	2519	7	NNC	ENSMUSG00000040350.17	novel	2161	7	NA	NA	492	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.51661147842358	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGGGTGTCTGGAC	NA	False	NA	NA	False	AATACA	-13	NA	48728802	48742014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48728873_48729663_48729760_48731061_48731308_48736262_48736508_48738851_48738968_48739399_48739436_48740304
ES.4699.4	chr11	+	2568	9	NNC	ENSMUSG00000040350.17	novel	2161	7	NA	NA	-506	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.28787565221539	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGGGTGTCTGGAC	NA	False	NA	NA	False	AATACA	-13	NA	48728834	48742014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48728873_48729663_48729760_48730592_48730668_48731064_48731308_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
ES.4699.5	chr11	+	2552	8	NNC	ENSMUSG00000040350.17	novel	320	3	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.38190457150472	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTCTAGGGGTGTCTGG	NA	False	NA	NA	False	AATACA	-11	NA	48729302	48742012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48729402_48729663_48729760_48731064_48731308_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
ES.4699.6	chr11	+	2483	7	NNC	ENSMUSG00000040350.17	novel	2356	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.3094010767585	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAGGGGTGTCTGGAC	NA	False	NA	NA	False	AATACA	-13	NA	48729635	48742014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_48729760_48731064_48731308_48736262_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
ES.47.1	chr1	-	1597	2	Antisense	novelGene_ENSMUSG00000051285.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTTGGCTACATATGT	NA	False	NA	NA	False	NA	NA	NA	7237587	7235855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_7237022_7237156
ES.47.2	chr1	-	3862	1	Antisense	novelGene_ENSMUSG00000051285.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7239738	7235876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_7235900_7239700
ES.470.1	chr1	+	2500	2	Antisense	novelGene_ENSMUSG00000073678.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTGATCCTGGTACAAT	NA	False	NA	NA	False	NA	NA	NA	54519624	54523131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_54520006_54521012
ES.4700.1	chr11	-	200	1	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	5836	94	5836	-90	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGAAATTTTGT	NA	False	NA	NA	False	NA	NA	NA	48756365	48756165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_48756200_48756400
ES.4701.1	chr11	-	170	1	Intergenic	novelGene_3645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGGGAATAGATTGTT	NA	False	NA	NA	False	NA	NA	NA	48766440	48766270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48766300_48766400
ES.4702.1	chr11	-	181	1	Intergenic	novelGene_3646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATGAAGAACAAGA	NA	False	NA	NA	False	NA	NA	NA	48853510	48853329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48853300_48853500
ES.4703.1	chr11	-	178	1	Intergenic	novelGene_3647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATGAAGAACAAG	2876	False	NA	NA	False	NA	NA	NA	48925350	48925172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_48925200_48925400
ES.4704.1	chr11	+	4513	5	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	-708	59	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.6824378112369	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCTTCTGTCTTATCTG	458	False	NA	97	True	NA	NA	NA	49093410	49109702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49093781_49094169_49094366_49103521_49103604_49104416_49104470_49105890
ES.4704.11	chr11	+	3759	2	FSM	ENSMUSG00000046311.14	ENSMUST00000151228.2	640	2	-7	-3112	1	-27	multi-exon	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	1373	False	NA	4	True	AATAAA	-13	NA	49094325	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49105890
ES.4704.12	chr11	+	3666	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	208	-2	2	2	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGGCTTTTTATTAC	1374	False	NA	NA	False	AATAAA	-14	NA	49094326	49109382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
ES.4704.13	chr11	+	4082	5	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	2	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.6085931090146	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCTGTGACTTGTT	1374	False	NA	3	True	AATAAA	-12	NA	49094326	49109608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094366_49095954_49096145_49103521_49103604_49104416_49104470_49105890
ES.4704.15	chr11	+	4001	5	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	-2	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.2609744347491	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	1378	False	NA	4	True	AATAAA	-13	NA	49094330	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094370_49103513_49103604_49104416_49104470_49105381_49105482_49105890
ES.4704.16	chr11	+	3992	5	FSM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	6	31	-2	-24	multi-exon	FALSE	canonical	1	1	junction_3	50.6310181608073	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1378	False	NA	7	True	AATAAA	-16	NA	49094330	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105381_49105482_49105890
ES.4704.18	chr11	+	3913	5	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.5498486375085	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1378	False	NA	7	True	AATAAA	-16	NA	49094330	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094366_49103521_49103604_49104416_49104470_49105049_49105071_49105890
ES.4704.19	chr11	+	4719	4	NIC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	8	-28	intron_retention	FALSE	canonical	3	10	junction_3	45.3896708758967	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCTGTGACTTGTT	1388	False	NA	3	True	AATAAA	-12	NA	49094340	49109608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49094366_49103521_49103604_49104416_49104470_49105049
ES.4704.2	chr11	+	4142	4	NNC	ENSMUSG00000046311.14	novel	743	3	NA	NA	-626	-27	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.8949595664257	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	540	False	NA	4	True	AATAAA	-13	NA	49093492	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49093781_49103521_49103604_49104416_49104470_49105890
ES.4704.20	chr11	+	4889	4	NIC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	9	-28	intron_retention	FALSE	canonical	2	4	junction_3	48.0300831655421	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCTGTGACTTGTT	1389	False	NA	3	True	AATAAA	-12	NA	49094341	49109608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49094366_49103521_49103604_49104416_49105482_49105890
ES.4704.22	chr11	+	3901	4	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	21	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.3650214343336	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1401	False	NA	7	True	AATAAA	-16	NA	49094353	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094390_49103513_49103604_49104416_49104470_49105890
ES.4704.23	chr11	+	4076	6	NNC	ENSMUSG00000046311.14	novel	880	6	NA	NA	21	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.2650868656576	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1401	False	NA	7	True	AATAAA	-16	NA	49094353	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094370_49094822_49095001_49095277_49095303_49103521_49103604_49104416_49104470_49105890
ES.4704.24	chr11	+	4658	4	FSM	ENSMUSG00000046311.14	ENSMUST00000136539.2	2992	4	-647	-1019	-62	-27	multi-exon	FALSE	canonical	1	1	junction_1	53.8949595664257	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	1546	False	NA	4	True	AATAAA	-13	NA	49094498	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49095303_49103521_49103604_49104416_49104470_49105890
ES.4704.25	chr11	+	4321	4	NIC	ENSMUSG00000046311.14	novel	880	6	NA	NA	-29	-24	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	53.8949595664257	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1579	False	NA	7	True	AATAAA	-16	NA	49094531	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49094996_49103521_49103604_49104416_49104470_49105890
ES.4704.26	chr11	+	4430	5	NNC	ENSMUSG00000046311.14	novel	880	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	49.9017785254193	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAGTAGAGAGTCATT	1590	False	NA	31	True	AATAAA	-40	NA	49094542	49109636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094996_49103521_49103604_49104416_49104470_49105049_49105146_49105890
ES.4704.27	chr11	+	6706	2	ISM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	7766	34	-1424	-27	intron_retention	FALSE	canonical	3	120	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	3301	False	NA	4	True	AATAAA	-13	NA	49102090	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49103604_49104416
ES.4704.28	chr11	+	6285	1	NIC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	-190	-27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGGCTGTGACTTGTTT	4535	False	NA	4	True	AATAAA	-13	NA	49103324	49109609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49103300_49109600
ES.4704.3	chr11	+	4075	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	29	-232	25	-24	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1195	False	NA	7	True	AATAAA	-16	NA	49094147	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
ES.4704.4	chr11	+	5362	2	NNC	ENSMUSG00000046311.14	novel	2992	4	NA	NA	39	-4893	intron_retention	TRUE	non_canonical	0	0	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCTTCTTTAGCCTG	1209	False	NA	NA	False	NA	NA	NA	49094161	49099570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49095094_49095140
ES.4704.5	chr11	+	5357	3	FSM	ENSMUSG00000046311.14	ENSMUST00000157023.8	1457	3	-25	-3875	-25	-24	multi-exon	FALSE	canonical	3	79	junction_1	20.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1334	False	NA	7	True	AATAAA	-16	NA	49094286	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49103521_49103604_49104416
ES.4704.6	chr11	+	4060	5	FSM	ENSMUSG00000046311.14	ENSMUST00000150284.8	366	5	-24	-3670	-24	-28	multi-exon	FALSE	canonical	1	1	junction_3	50.6310181608073	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCTGTGACTTGTT	1335	False	NA	3	True	AATAAA	-12	NA	49094287	49109608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105352_49105482_49105890
ES.4704.8	chr11	+	4138	6	NNC	ENSMUSG00000046311.14	novel	366	5	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	47.6554299109766	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTGACTTGTTTTAG	1357	False	NA	7	True	AATAAA	-16	NA	49094309	49109612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49094366_49103521_49103604_49104416_49104470_49105049_49105146_49105352_49105482_49105890
ES.4704.9	chr11	+	4073	5	NIC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	2	-33	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57.3601560318659	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAAATAGGCTGTGAC	1361	False	NA	-2	True	AATAAA	-7	NA	49094313	49109603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49094366_49094822_49094996_49103521_49103604_49104416_49104470_49105890
ES.4705.1	chr11	+	3111	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	45	-5	-10	0	multi-exon	TRUE	canonical	2	7	junction_1	35.4432253360529	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49135062	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
ES.4705.10	chr11	+	2883	4	NNC	ENSMUSG00000020346.17	novel	2729	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	16.6799946709291	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141379	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141483_49142376_49142502_49148613_49148812_49151397
ES.4705.11	chr11	+	3130	6	NNC	ENSMUSG00000020346.17	novel	2729	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.3935051239151	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141382	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141483_49142376_49142502_49145706_49145876_49146170_49146252_49148613_49148812_49151397
ES.4705.12	chr11	+	2642	3	NNC	ENSMUSG00000020346.17	novel	2729	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.5	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49141386	49153849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141483_49142407_49142502_49151397
ES.4705.13	chr11	+	2596	3	NNC	ENSMUSG00000020346.17	novel	2729	3	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	45	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49141481	49153849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141501_49142376_49142502_49151397
ES.4705.14	chr11	+	2726	3	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	42.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141489	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141634_49142376_49142502_49151397
ES.4705.15	chr11	+	3468	2	ISM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	152	3	74	0	3prime_fragment	FALSE	canonical	3	91	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141490	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49142502_49151397
ES.4705.2	chr11	+	2943	3	NNC	ENSMUSG00000020346.17	novel	633	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49135245	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49135307_49136019_49136445_49151397
ES.4705.3	chr11	+	3036	4	NNC	ENSMUSG00000020346.17	novel	633	3	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8623236946117	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49135331	49153849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49135366_49136019_49136445_49142376_49142502_49151397
ES.4705.4	chr11	+	3524	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	298	7	-23	-2	3prime_fragment	FALSE	canonical	3	29	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATAAGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49135370	49153847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49136445_49151397
ES.4705.5	chr11	+	2882	4	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	251	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.9124245031395	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49136308	49153849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49136445_49142376_49142502_49145706_49145876_49151397
ES.4705.6	chr11	+	2790	3	NNC	ENSMUSG00000020346.17	novel	2976	3	NA	NA	252	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49136309	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49136445_49148613_49148812_49151397
ES.4705.7	chr11	+	2676	3	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	257	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.5	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49136314	49153849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49136445_49142407_49142502_49151397
ES.4705.8	chr11	+	2755	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	-29	3	-29	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141309	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49141483_49142376_49142502_49151397
ES.4705.9	chr11	+	2924	4	NNC	ENSMUSG00000020346.17	novel	2729	3	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.624953392932	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141309	49153854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49141483_49142376_49142502_49145706_49145876_49151397
ES.4706.1	chr11	-	347	1	Intergenic	novelGene_3648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATTAAAAACAAAATA	NA	False	NA	NA	False	NA	NA	NA	49149895	49149548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49149500_49149900
ES.4707.1	chr11	-	4946	1	Intergenic	novelGene_3649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49159670	49154724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49154700_49159700
ES.4708.1	chr11	+	115	1	ISM	ENSMUSG00000047702.3	ENSMUST00000215226.2	3034	4	8649	716	1420	599	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	49336099	49336214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49336100_49336200
ES.4709.1	chr11	+	948	1	Intergenic	novelGene_3650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	49342426	49343374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49342400_49343400
ES.471.1	chr1	-	10616	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-33	0	-31	0	multi-exon	TRUE	canonical	3	24	junction_18	5.36548800562088	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTACTGGTTTTCAT	NA	False	NA	3	True	AATAAA	-29	NA	54596874	54512152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.12	chr1	-	5206	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	9	5368	9	-5368	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATGTTTTTGTGTTTT	NA	False	NA	NA	False	AATATA	-41	NA	54596832	54517520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.13	chr1	-	4908	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-16	5691	-14	-5691	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTCTGAAAGTACTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	54596857	54517843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.14	chr1	-	4676	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-163	6070	-161	-6070	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGTGAGTTCATTGGA	NA	False	NA	NA	False	AATAAA	-26	NA	54597004	54518222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.15	chr1	-	1912	3	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	44610	-6072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGAGTGAGTTCATTG	NA	False	NA	NA	False	AATAAA	-24	NA	54523995	54518224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54520004_54521010_54521116_54523967
ES.471.16	chr1	-	2082	3	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	44629	-6072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGAGTGAGTTCATTG	NA	False	NA	NA	False	AATAAA	-24	NA	54523976	54518224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54520004_54521010_54521116_54523778
ES.471.17	chr1	-	4753	26	NIC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	-292	-6073	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	8.83846140456584	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGAGTGAGTTCATT	NA	False	NA	NA	False	AATAAA	-23	NA	54597135	54518225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54520004_54521010_54521116_54525628_54525817_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.18	chr1	-	4486	28	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	-25	-6083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.52463548492788	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTGAGTACCCAAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	54596868	54518235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54519190_54519230_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.19	chr1	-	4034	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-1	6550	-1	-6550	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGTGTCGTCAAACCC	NA	False	NA	NA	False	AATAAA	-14	NA	54596842	54518702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.2	chr1	-	10279	28	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.52463548492788	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGTACAAAGATTGTT	NA	False	NA	-10	True	AATAAA	-16	NA	54596845	54512165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54514660_54514954_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.20	chr1	-	3460	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-10	7133	-8	-7133	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCATTTTCATGAACT	NA	False	NA	NA	False	ATTAAA	-41	NA	54596851	54519285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.21	chr1	-	2331	24	ISM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	180	17155	125	-17155	5prime_fragment	FALSE	canonical	3	24	junction_15	5.49101345231091	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAAATTGTTGTGTTTT	NA	False	NA	NA	False	AATATA	-16	NA	54596661	54529307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.22	chr1	-	6704	13	ISM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	2	43044	2	8246	5prime_fragment	FALSE	canonical	3	24	junction_4	6.03404691912668	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	54596839	54555196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.23	chr1	-	3409	10	ISM	ENSMUSG00000073678.5	ENSMUST00000185817.2	1408	12	-19	2115	-19	-199	5prime_fragment	FALSE	canonical	3	24	junction_1	5.35412613473634	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGTCTTCATTGTTA	NA	False	NA	NA	False	TATAAA	-18	NA	54596862	54565557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.24	chr1	-	11829	1	FSM	ENSMUSG00000073678.5	ENSMUST00000189506.2	3025	1	-53	-8751	2	8751	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAGGTGAGATTAGTT	NA	False	NA	NA	False	NA	NA	NA	54596839	54585010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54585000_54596800
ES.471.25	chr1	-	2684	3	ISM	ENSMUSG00000073678.5	ENSMUST00000185817.2	1408	12	-46	21598	-46	8721	5prime_fragment	FALSE	canonical	3	35	junction_1	3	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54596889	54585040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54587274_54590135_54590290_54596592
ES.471.4	chr1	-	8270	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-14	2327	-12	-2327	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTGTAGATGTCTG	NA	False	NA	NA	False	NA	NA	NA	54596855	54514479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.5	chr1	-	8060	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	-27	2550	-25	-2550	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATACTCTGTTTTTC	NA	False	NA	1	True	AATAAA	-20	NA	54596868	54514702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.6	chr1	-	5531	21	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	-1513	-2556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.47351571487587	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGTTCCATACTCTG	NA	False	NA	-5	True	AATAAA	-14	NA	54570118	54514708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54516250_54517716_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012
ES.471.8	chr1	-	6558	28	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	-6	-2556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.6886347856144	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGTTCCATACTCTG	NA	False	NA	-5	True	AATAAA	-14	NA	54596849	54514708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54516254_54517727_54520004_54521010_54521116_54525628_54525817_54529382_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ES.471.9	chr1	-	5619	3	NNC	ENSMUSG00000073678.5	novel	10583	27	NA	NA	44608	-2556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGTTCCATACTCTG	NA	False	NA	-5	True	AATAAA	-14	NA	54523997	54514708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_54520004_54521010_54521116_54523778
ES.4710.1	chr11	+	2805	10	NIC	ENSMUSG00000020357.4	novel	6255	30	NA	NA	401	4470	intron_retention	TRUE	canonical	0	0	junction_8	1.6629588385662	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGACTGACACCCGTTCT	NA	False	NA	NA	False	GATAAA	-17	NA	49500490	49524238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49500655_49515471_49515569_49516053_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521339_49521503_49522805
ES.4710.2	chr11	+	4804	30	FSM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	424	1027	424	-1027	multi-exon	TRUE	canonical	0	0	junction_18	1.68012796070067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGAGAAGAACCGTTT	NA	False	NA	NA	False	NA	NA	NA	49500513	49542539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49500655_49515471_49515569_49516053_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
ES.4710.3	chr11	+	5819	30	FSM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	424	12	424	-12	multi-exon	FALSE	canonical	0	0	junction_18	1.68012796070067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGTTATAATGAATAGA	NA	False	NA	NA	False	AATAAA	-14	NA	49500513	49543554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49500655_49515471_49515569_49516053_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
ES.4710.4	chr11	+	5554	30	NNC	ENSMUSG00000020357.4	novel	6255	30	NA	NA	493	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	1.76166065854411	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAGATTCTAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	49500582	49543562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49500655_49515471_49515569_49516053_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49525016_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
ES.4710.5	chr11	+	3239	19	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	23938	903	23938	-903	3prime_fragment	FALSE	canonical	0	0	junction_7	1.88234159401082	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATCAATAACTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	49524027	49542663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
ES.4710.6	chr11	+	3081	11	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	27622	4	27622	-4	3prime_fragment	FALSE	canonical	0	0	junction_6	2.20227155455452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAATAGATTCTAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	49527711	49543562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773_49538860_49541711
ES.4711.1	chr11	+	3435	1	Intergenic	novelGene_3652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAACAATAAAACCCGAGT	NA	False	NA	NA	False	TATAAA	-34	NA	49558669	49562104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49558700_49562100
ES.4712.1	chr11	+	180	1	Intergenic	novelGene_3654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTTGTA	NA	False	NA	NA	False	NA	NA	NA	49576388	49576568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49576400_49576600
ES.4713.1	chr11	+	1247	1	Intergenic	novelGene_3656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	49583123	49584370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49583100_49584400
ES.4714.1	chr11	+	3935	5	Antisense	novelGene_ENSMUSG00000020362.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACCTACTGCTGTCATT	NA	False	NA	NA	False	NA	NA	NA	49602977	49611477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_49605549_49606379_49606503_49607160_49607280_49608481_49608751_49610624
ES.4714.3	chr11	+	3080	4	Antisense	novelGene_ENSMUSG00000020362.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGGTGCATTTGCAAT	NA	False	NA	NA	False	NA	NA	NA	49603127	49608895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_49605549_49606376_49606503_49607160_49607280_49608481
ES.4715.1	chr11	-	4435	1	Intergenic	novelGene_3651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGAATCACCTTTCT	NA	False	NA	NA	False	NA	NA	NA	49561899	49557464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49557500_49561900
ES.4716.1	chr11	-	6103	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-4	-3601	-4	391	multi-exon	TRUE	canonical	3	150	junction_7	24.0849049121664	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAAGCGTTGTGTTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	49603541	49561938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.10	chr11	-	5394	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-54	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	71.8585617206606	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAAGTGTAGTTTGT	NA	False	NA	-9	True	AATAAA	-20	NA	49603604	49562328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603577
ES.4716.11	chr11	-	5595	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	63.3767431338021	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603545	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603301
ES.4716.13	chr11	-	5641	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5358947159428	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603558	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.14	chr11	-	5647	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	82.9494518984178	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603555	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575993_49576089_49576180_49577673_49577760_49579991_49580086_49593363_49593482_49603180
ES.4716.15	chr11	-	5667	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.6332628867019	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603552	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574054_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.16	chr11	-	5547	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	85.2589584735821	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603550	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49579991_49580086_49593362_49593482_49603180
ES.4716.17	chr11	-	5634	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.6323243842199	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603536	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.18	chr11	-	5382	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	62.2966775442949	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603608	49562329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603577
ES.4716.19	chr11	-	5837	13	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	78.8924637296449	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAAGTGTAGT	NA	False	NA	-13	True	AATAAA	-16	NA	49603546	49562332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49598230_49598354_49603180
ES.4716.2	chr11	-	5758	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-40	-3220	-27	10	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTTTGTACAGCTCTA	NA	False	NA	0	True	AATAAA	-29	NA	49603577	49562319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.21	chr11	-	5565	14	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	99.9364887073182	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATATTTTAAAAGTGTA	NA	False	NA	-15	True	AATAAA	-14	NA	49603526	49562334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49598258_49598354_49603180_49603250_49603398
ES.4716.22	chr11	-	5744	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-9	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	65.5531082405709	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATATTTTAAAAGTGTA	NA	False	NA	-15	True	AATAAA	-14	NA	49603559	49562334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.23	chr11	-	5361	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	2	-2865	2	-345	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGTAGTGTCTAAAA	NA	False	NA	NA	False	CATAAA	-16	NA	49603535	49562674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.24	chr11	-	5187	11	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-14	-655	intron_retention	FALSE	canonical	3	170	junction_10	17.8440466262561	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCTAAATCTTTAAATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	49603564	49562984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.25	chr11	-	4999	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-20	757	-20	-757	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTTTGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	49603570	49563086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.26	chr11	-	4941	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-21	-2422	-8	-788	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATCCCAGAACATAGGC	NA	False	NA	NA	False	AGTAAA	-18	NA	49603558	49563117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.27	chr11	-	4800	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-7	-842	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5358947159428	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGGTATAGTATAAACT	NA	False	NA	NA	False	TTTAAA	-20	NA	49603557	49563171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593360_49593482_49603180
ES.4716.28	chr11	-	4675	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-15	-988	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.6323243842199	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGGAGTGTTTGGAATAT	NA	False	NA	NA	False	NA	NA	NA	49603565	49563317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.29	chr11	-	4718	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-37	-2183	-24	-1027	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTTCTTGCTGATA	NA	False	NA	NA	False	AATAAA	-28	NA	49603574	49563356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.3	chr11	-	4534	1	Genic_Genomic	ENSMUSG00000020362.14	novel	NA	NA	NA	NA	4370	5	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGTAGTTTGTACAG	NA	False	NA	-5	True	AATAAA	-24	NA	49566858	49562324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_49562300_49566900
ES.4716.30	chr11	-	4718	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-9	1027	-9	-1027	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTTCTTGCTGATA	NA	False	NA	NA	False	AATAAA	-28	NA	49603559	49563356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.31	chr11	-	4601	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-3	-1035	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5358947159428	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTAATTTCAGTGTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	49603553	49563364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.32	chr11	-	4348	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	34	-1036	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.6357035056239	666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTAATTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	49603503	49563365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593361_49593482_49603398
ES.4716.33	chr11	-	3395	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-4	-1036	intron_retention	FALSE	canonical	1	4	junction_1	61.422934312064	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTAATTTCAGTGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	49603554	49563365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49564556_49565956_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.34	chr11	-	4293	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	47	1396	34	-1396	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCCTAGTAAGATATAAT	NA	False	NA	NA	False	AATATA	-14	NA	49603503	49563725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.35	chr11	-	4015	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	1	-1518	1	1503	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTGGTAGTGTGCA	NA	False	NA	NA	False	NA	NA	NA	49603536	49564021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.36	chr11	-	3978	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-27	1785	-27	1410	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTGTCCTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49603577	49564114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.37	chr11	-	3930	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-21	-1411	-8	1396	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAACTTGCAATGGCTT	NA	False	NA	NA	False	NA	NA	NA	49603558	49564128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.38	chr11	-	4075	13	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-26	1238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.6310719579044	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCTTGGACCTTGTTT	NA	False	NA	NA	False	AATAAA	-37	NA	49603576	49564286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49566960_49567246_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.39	chr11	-	3722	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	34	1224	intron_retention	FALSE	non_canonical	0	0	junction_9	65.5531082405709	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAAAGGTCTTGATAT	NA	False	NA	NA	False	AATAAA	-44	NA	49603503	49564300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.40	chr11	-	3785	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-48	-1239	-35	1224	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAAAGGTCTTGATAT	NA	False	NA	NA	False	AATAAA	-44	NA	49603585	49564300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.41	chr11	-	3869	11	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-12	1224	intron_retention	FALSE	canonical	3	170	junction_10	17.8440466262561	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAAAGGTCTTGATAT	NA	False	NA	NA	False	AATAAA	-44	NA	49603562	49564300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.42	chr11	-	3670	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-8	1224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5358947159428	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAAAGGTCTTGATAT	NA	False	NA	NA	False	AATAAA	-44	NA	49603558	49564300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.43	chr11	-	3803	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-38	1971	-38	1224	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTAAAGGTCTTGATAT	NA	False	NA	NA	False	AATAAA	-44	NA	49603588	49564300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.44	chr11	-	3516	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-62	1218	intron_retention	FALSE	canonical	2	4	junction_10	64.0563033588421	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCTCTAAAGGTCT	NA	False	NA	NA	False	AATAAA	-38	NA	49603612	49564306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603577
ES.4716.45	chr11	-	3780	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	2	1218	intron_retention	FALSE	canonical	0	0	junction_6	64.7309045201749	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCTCTAAAGGTCT	NA	False	NA	NA	False	AATAAA	-38	NA	49603535	49564306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574054_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.46	chr11	-	3439	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-1	1217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	87.6357035056239	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATTCTCTAAAGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	49603538	49564307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593363_49593482_49603398
ES.4716.47	chr11	-	3487	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	14	1206	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	61.2191565113972	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTTAAGAAATT	NA	False	NA	NA	False	AATAAA	-26	NA	49603523	49564318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603398
ES.4716.48	chr11	-	3659	12	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-3	1203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	72.6323243842199	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTTTCTTTTTAAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	49603553	49564321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.49	chr11	-	3463	11	NIC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	21	1202	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	63.884348630944	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTCTTTTTAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	49603516	49564322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.5	chr11	-	5489	11	NNC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-54	4	intron_retention	FALSE	canonical	2	4	junction_10	64.0563033588421	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTGTAGTTTGTACA	NA	False	NA	-6	True	AATAAA	-23	NA	49603604	49562325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603577
ES.4716.50	chr11	-	3854	13	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-31	1202	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	78.7107927090617	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTTCTTTTTAAGA	NA	False	NA	NA	False	AATAAA	-22	NA	49603581	49564322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49598258_49598354_49603180
ES.4716.51	chr11	-	3727	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	-1	1198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.6332628867019	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATTTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	49603538	49564326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574125_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.52	chr11	-	5620	10	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	2	1198	intron_retention	FALSE	canonical	3	170	junction_9	18.2722889428193	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATTTTTTCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	49603535	49564326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.53	chr11	-	3832	13	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	1	1197	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	78.8924637296449	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGAATTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	49603536	49564327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49598230_49598354_49603180
ES.4716.55	chr11	-	4747	10	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-1	1195	intron_retention	FALSE	canonical	3	170	junction_9	18.5818177425483	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGAATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	49603538	49564329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.58	chr11	-	3616	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	14	1195	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	82.9494518984178	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGAATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	49603523	49564329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575993_49576089_49576180_49577673_49577760_49579991_49580086_49593362_49593482_49603180
ES.4716.59	chr11	-	3489	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-9	2256	-9	939	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAACTTGTATATGTT	NA	False	NA	0	True	ATTAAA	-18	NA	49603559	49564585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.6	chr11	-	7411	9	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-6	4	intron_retention	FALSE	canonical	1	1	junction_2	69.0297716568728	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTGTAGTTTGTACA	NA	False	NA	-6	True	AATAAA	-23	NA	49603556	49562325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49571967_49572123_49572865_49573021_49573951_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.60	chr11	-	3496	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-46	-952	-33	937	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTTAACTTGTATATG	NA	False	NA	-2	True	ATTAAA	-16	NA	49603583	49564587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.61	chr11	-	3357	12	NNC	ENSMUSG00000020362.14	novel	2498	12	NA	NA	6	937	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	63.5358947159428	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTTAACTTGTATATG	NA	False	NA	-2	True	ATTAAA	-16	NA	49603531	49564587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580086_49593361_49593482_49603180
ES.4716.62	chr11	-	3218	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	34	-754	34	739	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGTAATTTTCTGTT	NA	False	NA	NA	False	TTTAAA	-22	NA	49603503	49564785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.63	chr11	-	2466	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	75	3195	62	0	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATTGAAAACAGTTGT	NA	False	NA	NA	False	ACTAAA	-13	NA	49603475	49565524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.64	chr11	-	6420	8	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	170	junction_7	16.1548627922596	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATTGAAAACAGTTGT	NA	False	NA	NA	False	ACTAAA	-13	NA	49603523	49565524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49568330_49570747_49572123_49572865_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.65	chr11	-	2519	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-21	0	-8	0	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	49603558	49565539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.66	chr11	-	2755	12	NNC	ENSMUSG00000020362.14	novel	600	2	NA	NA	-1	-757	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	61.5793514818532	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGTTGTTATTTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	49603538	49566296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_49567246_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.67	chr11	-	172	1	Intergenic	novelGene_3653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAGATGAC	NA	False	NA	NA	False	NA	NA	NA	49568833	49568661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49568700_49568800
ES.4716.68	chr11	-	523	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	-84	-91	-84	91	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACCTTTTATCATAAA	NA	False	NA	NA	False	NA	NA	NA	49569968	49569445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49569400_49570000
ES.4716.69	chr11	-	406	2	Genic_Genomic	ENSMUSG00000083061.2	novel	348	1	NA	NA	-70	45	multi-exon	FALSE	non_canonical	0	0	junction_1	0	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	NA	False	NA	NA	False	AATAAA	-22	NA	49569954	49569491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_49569661_49569717
ES.4716.7	chr11	-	5747	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	-9	-2	-9	2	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTGTAGTTTGTA	NA	False	NA	-8	True	AATAAA	-21	NA	49603559	49562327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4716.70	chr11	-	5150	1	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-1566	-1758	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGAGCTCCTTCCTTTC	NA	False	NA	NA	False	TATAAA	-25	NA	49575118	49569968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49570000_49575100
ES.4716.71	chr11	-	175	1	Intergenic	novelGene_3655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCTTTAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	49579375	49579200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49579200_49579400
ES.4716.72	chr11	-	1980	1	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-1	-29579	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCTTAAAATACAGTCC	NA	False	NA	NA	False	NA	NA	NA	49603538	49601558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49601600_49603500
ES.4716.9	chr11	-	5836	11	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	-7	1	intron_retention	FALSE	canonical	3	170	junction_10	17.8440466262561	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAAGTGTAGTTTGT	NA	False	NA	-9	True	AATAAA	-20	NA	49603557	49562328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ES.4717.1	chr11	+	176	1	Intergenic	novelGene_3657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACAAAAAACTTTC	NA	False	NA	NA	False	NA	NA	NA	49626343	49626519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49626300_49626500
ES.4718.1	chr11	+	3895	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	-932	-16	-923	16	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGTTAACCTCCTTTT	NA	False	NA	43	True	AATAAA	-33	NA	49684081	49729456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.10	chr11	+	2410	15	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	121.968296315569	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685004	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49718029_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.11	chr11	+	3064	20	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	144.081117503484	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGACTTGTTTGAATT	NA	False	NA	27	True	AATAAA	-17	NA	49685004	49729440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49693966_49694075_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.12	chr11	+	5245	18	NIC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	-1	intron_retention	FALSE	canonical	2	320	junction_10	54.6441777243427	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685005	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.13	chr11	+	3078	20	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	145.987553068642	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGACTTGTTTGAATTTAG	NA	False	NA	30	True	AATAAA	-20	NA	49685005	49729443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49716147_49716268_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.14	chr11	+	1673	8	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	169.502994976851	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTTGTTTGAATTTAGT	NA	False	NA	31	True	AATAAA	-21	NA	49685005	49729444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698567_49717972_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.15	chr11	+	2872	19	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.064836795029	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685005	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726520_49726601_49728547
ES.4718.18	chr11	+	5010	19	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	114.100413325227	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685005	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49715514_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.19	chr11	+	3086	20	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.087708691317	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGACTTGTTTGAA	NA	False	NA	25	True	AATAAA	-15	NA	49685005	49729438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49688123_49688257_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.2	chr11	+	2841	18	NIC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	118.195632797734	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49684990	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49723687_49723856_49726438_49726601_49728547
ES.4718.22	chr11	+	2984	19	NNC	ENSMUSG00000020363.7	novel	2865	2	NA	NA	10359	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	113.789672229833	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGACTTGTTTGAATT	NA	False	NA	27	True	AATAAA	-17	NA	49695372	49729440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49695467_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ES.4718.23	chr11	+	3636	4	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	35752	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	240.903853573717	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTTTGAATTTAGTTA	654	False	NA	33	True	AATAAA	-23	NA	49720765	49729446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49723173_49723687_49723856_49726438_49726601_49728547
ES.4718.24	chr11	+	1074	1	Genic_Genomic	ENSMUSG00000020363.7	novel	NA	NA	NA	NA	44356	1003	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATTAGAACTGT	6480	False	NA	NA	False	NA	NA	NA	49729369	49730443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_49729400_49730400
ES.4718.3	chr11	+	2949	20	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	146.73616249937	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGACTTGTTTGAATT	NA	False	NA	27	True	AATAAA	-17	NA	49684990	49729440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720637_49723135_49723173_49723687_49723856_49726438_49726601_49728547
ES.4718.4	chr11	+	8252	17	NIC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	-12	0	intron_retention	FALSE	canonical	2	320	junction_10	55.1256731818306	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGACTTGTTTGAATT	NA	False	NA	27	True	AATAAA	-17	NA	49684992	49729440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49717729_49717957_49718073_49720566_49723856_49726438_49726601_49728547
ES.4718.6	chr11	+	2943	19	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	115.064836795029	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCGACTTGTTTGAAT	NA	False	NA	26	True	AATAAA	-16	NA	49685001	49729439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723841_49726438_49726601_49728547
ES.4718.7	chr11	+	5247	18	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	-3	6	intron_retention	FALSE	canonical	1	1	junction_15	117.926726414194	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGTTTGAATTTAGTTA	NA	False	NA	33	True	AATAAA	-23	NA	49685001	49729446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49717729_49717957_49718073_49720566_49720695_49723696_49723856_49726438_49726601_49728547
ES.4718.9	chr11	+	1617	14	NNC	ENSMUSG00000020363.7	novel	2947	19	NA	NA	0	-13641	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	122.212686855344	367	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATATCAATTCT	NA	False	NA	NA	False	NA	NA	NA	49685004	49715799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49715514
ES.4719.1	chr11	-	6190	1	Intergenic	novelGene_3658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAGTTTGAGGAGTTA	NA	False	NA	NA	False	NA	NA	NA	49692888	49686698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49686700_49692900
ES.472.1	chr1	+	214	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCATCCTTATCTATAAA	NA	False	NA	NA	False	NA	NA	NA	54764752	54764966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_54764800_54765000
ES.4720.1	chr11	-	345	1	Intergenic	novelGene_3659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGCTTCCAGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	49701694	49701349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49701300_49701700
ES.4720.2	chr11	-	180	1	Intergenic	novelGene_3660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	49701693	49701513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49701500_49701700
ES.4721.1	chr11	+	4192	1	Intergenic	novelGene_3661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGCGTCTGTAGAAAAA	8537	False	NA	NA	False	AAAAAG	-7	NA	49731426	49735618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49731400_49735600
ES.4722.10	chr11	+	3519	11	NIC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	-1	555	intron_retention	FALSE	canonical	3	70	junction_7	142.964890794908	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737576	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49772110_49772957_49773027_49773968
ES.4722.12	chr11	+	2078	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	1	555	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737580	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.13	chr11	+	2103	12	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	580	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	145.613719724141	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGATGTTTTAGGC	NA	False	NA	NA	False	AATAAA	-20	NA	49737580	49774717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.14	chr11	+	4590	13	NNC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	1	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	154.779121295118	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737580	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773031_49773979
ES.4722.15	chr11	+	5287	11	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	-313	intron_retention	FALSE	canonical	3	70	junction_6	95.5571033466377	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737580	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.17	chr11	+	4211	11	NNC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	7	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	116.047231763623	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAATGTACAGCA	NA	False	NA	13	True	AATACA	-12	NA	49737586	49776914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49769108_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.18	chr11	+	3503	11	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	8	583	intron_retention	FALSE	canonical	3	274	junction_6	39.0645619455793	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGTTTTAGGCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	49737587	49774720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.19	chr11	+	4648	12	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	106.592217475978	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737589	49777248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754387_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.2	chr11	+	4440	12	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-4	-224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	112.342672360318	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTGAAGTGTCGTAA	NA	False	NA	113	True	NA	NA	NA	49737573	49777014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760131_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.20	chr11	+	4672	13	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-8	-224	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	132.897490779757	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTGAAGTGTCGTAA	NA	False	NA	113	True	NA	NA	NA	49737589	49777014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.21	chr11	+	4412	12	NNC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	-8	-226	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	145.8156313538	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	111	True	NA	NA	NA	49737589	49777012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754387_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.23	chr11	+	6631	13	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-7	2023	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	107.744650550374	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACACCAAGAGGCATTTC	NA	False	NA	NA	False	NA	NA	NA	49737590	49779271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973_49777357_49777412
ES.4722.24	chr11	+	4663	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	12	0	-6	0	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737591	49777248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.26	chr11	+	2350	13	NIC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	-3	555	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	162.270072375928	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737594	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.27	chr11	+	2362	13	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-2	573	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	132.897490779757	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATTTGTGATGT	NA	False	NA	NA	False	AATAAA	-13	NA	49737595	49774710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.28	chr11	+	10810	9	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	-2	580	intron_retention	FALSE	canonical	3	358	junction_8	23.9986978813435	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGATGTTTTAGGC	NA	False	NA	NA	False	AATAAA	-20	NA	49737595	49774717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.29	chr11	+	10246	9	NIC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	0	555	intron_retention	FALSE	canonical	3	12	junction_2	173.720141319307	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737597	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49772110_49772957_49773027_49773968
ES.4722.31	chr11	+	4723	11	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	0	575	intron_retention	FALSE	canonical	0	0	junction_6	117.199189416992	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAATTTGTGATGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	49737597	49774712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49764937_49765090_49765163_49769057_49769241_49770528_49772110_49772957_49773027_49773973
ES.4722.34	chr11	+	3827	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	20	830	0	-820	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAATTTGCACTAGG	NA	False	NA	NA	False	TATAAA	-17	NA	49737597	49776418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.35	chr11	+	2266	12	NNC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	163.316961005482	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATTTGTGATGT	NA	False	NA	NA	False	AATAAA	-13	NA	49737598	49774710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49769078_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.36	chr11	+	4325	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	21	331	1	-321	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAATGTACAGCATGT	NA	False	NA	16	True	AATACA	-15	NA	49737598	49776917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.37	chr11	+	10969	9	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	-224	intron_retention	FALSE	canonical	3	354	junction_5	24.6522691653324	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTGAAGTGTCGTAA	NA	False	NA	113	True	NA	NA	NA	49737598	49777014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.38	chr11	+	4280	11	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	1	-227	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	115.470169307921	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGATGTTGAAGTGTCG	NA	False	NA	110	True	NA	NA	NA	49737598	49777011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.39	chr11	+	4046	10	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	1	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	121.885293170907	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAATGTACAGCA	NA	False	NA	13	True	AATACA	-12	NA	49737598	49776914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49772013_49772110_49772957_49773027_49773973
ES.4722.4	chr11	+	4450	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	-3	230	-3	-220	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAAGTGTCGTAATTTC	NA	False	NA	117	True	AATAGA	-1	NA	49737574	49777018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.40	chr11	+	4240	11	NNC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	116.047231763623	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737598	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49769078_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.41	chr11	+	9592	10	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	1	-313	intron_retention	FALSE	canonical	3	354	junction_5	24.3056666664127	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737598	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.42	chr11	+	4701	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	1	85	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTAGCAAGCCTCCC	NA	False	NA	99	True	NA	NA	NA	49737598	49777333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.43	chr11	+	4920	13	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	129.970162174076	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTGTGTACTTGT	NA	False	NA	7	True	NA	NA	NA	49737601	49777241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764937_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.46	chr11	+	5586	12	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	5	-226	intron_retention	FALSE	canonical	0	0	junction_6	141.29261589264	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	111	True	NA	NA	NA	49737602	49777012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49764937_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.48	chr11	+	7351	10	NIC	ENSMUSG00000020366.19	novel	4677	12	NA	NA	9	555	intron_retention	FALSE	canonical	3	354	junction_5	24.3056666664127	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737606	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.5	chr11	+	4402	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	-1	-226	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGATGTTGAAGTGTCGT	NA	False	NA	111	True	NA	NA	NA	49737576	49777012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.50	chr11	+	4426	13	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	9	2615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	107.744650550374	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGAAAAGTTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	49737606	49779863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973_49777005_49779841
ES.4722.51	chr11	+	4289	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	30	363	10	-353	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGTGGAAAATAATACAAA	NA	False	NA	-16	True	AATAAA	-19	NA	49737607	49776885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.52	chr11	+	4634	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	31	12	11	-2	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTTAATGGTGCCTGTGTA	NA	False	NA	2	True	NA	NA	NA	49737608	49777236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.53	chr11	+	3046	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	31	1600	11	1511	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCGTTGCATCCTAATG	NA	False	NA	NA	False	NA	NA	NA	49737608	49775648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.55	chr11	+	4286	12	NNC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	14	-227	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	111.458475386743	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGATGTTGAAGTGTCG	NA	False	NA	110	True	NA	NA	NA	49737611	49777011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49774093
ES.4722.56	chr11	+	3817	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	32	826	14	-816	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTTGCACTAGGTTAG	NA	False	NA	NA	False	TATAAA	-21	NA	49737611	49776422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.57	chr11	+	2095	12	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	14	580	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	106.592217475978	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGATGTTTTAGGC	NA	False	NA	NA	False	AATAAA	-20	NA	49737611	49774717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754387_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.58	chr11	+	3297	12	NNC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	19	555	intron_retention	FALSE	canonical	0	0	junction_6	132.963301964946	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATACAGCTA	NA	False	NA	NA	False	ATTAAA	-8	NA	49737616	49774692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49764937_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.59	chr11	+	4293	12	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	19	-316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	112.26172194865	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACAGCATGTCCAAT	NA	False	NA	21	True	AATACA	-20	NA	49737616	49776922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773008_49773973
ES.4722.6	chr11	+	2146	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	-1	2532	-1	579	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGTGATGTTTTAGG	NA	False	NA	NA	False	AATAAA	-19	NA	49737576	49774716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.61	chr11	+	4440	13	NNC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	34	-324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	170.278693127864	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAATGTACAGCA	NA	False	NA	13	True	AATACA	-12	NA	49737631	49776914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49762975_49763122_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.62	chr11	+	1329	6	FSM	ENSMUSG00000020366.19	ENSMUST00000148274.8	1245	6	-88	4	34	-4	multi-exon	FALSE	canonical	3	354	junction_5	26.8029849084015	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAAATTCATGTGATTA	NA	False	NA	NA	False	AATAAA	-17	NA	49737631	49764220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560
ES.4722.63	chr11	+	4300	13	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	34	4199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	107.744650550374	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCAGCATTCAACTCAG	NA	False	NA	NA	False	NA	NA	NA	49737631	49781447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973_49776908_49781429
ES.4722.64	chr11	+	5663	11	NIC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	40	-313	intron_retention	FALSE	canonical	3	84	junction_10	94.1475437810249	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737637	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.66	chr11	+	2179	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	117	2379	-23	732	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTGCCCACGAATTTC	NA	False	NA	NA	False	NA	NA	NA	49737696	49774869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.69	chr11	+	4253	13	NNC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	25	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	141.203458409016	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737744	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764870_49764937_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.7	chr11	+	2147	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	-3	2531	-1	580	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGATGTTTTAGGC	NA	False	NA	NA	False	AATAAA	-20	NA	49737576	49774717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.70	chr11	+	5334	11	NNC	ENSMUSG00000020366.19	novel	950	7	NA	NA	550	-319	intron_retention	FALSE	canonical	0	0	junction_5	142.851706325126	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGTACAGCATGTCC	NA	False	NA	18	True	AATACA	-17	NA	49745633	49776919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49764937_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4722.71	chr11	+	3965	5	ISM	ENSMUSG00000020366.19	ENSMUST00000102778.8	4447	11	23440	324	23396	-324	3prime_fragment	FALSE	canonical	3	84	junction_4	122.338413836374	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAATGTACAGCA	NA	False	NA	13	True	AATACA	-12	NA	49768479	49776914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ES.4722.72	chr11	+	3312	4	NNC	ENSMUSG00000020366.19	novel	1297	11	NA	NA	24010	-313	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	172.132377998898	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49769093	49776925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49769241_49770528_49770654_49772045_49772134_49773973
ES.4722.8	chr11	+	4447	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	-3	231	-1	-221	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAAGTGTCGTAATTT	NA	False	NA	116	True	NA	NA	NA	49737576	49777017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ES.4723.1	chr11	+	2242	14	FSM	ENSMUSG00000020374.17	ENSMUST00000093142.12	2216	14	-26	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	2.76067052998867	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGCACATGAGTGTCCA	NA	False	NA	NA	False	AGTAAA	-18	NA	49792655	49871042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49792795_49847860_49848044_49848189_49848313_49849426_49849565_49851224_49851426_49851980_49852056_49858163_49858254_49860322_49860426_49860870_49860951_49861032_49861129_49862195_49862292_49866453_49866578_49869234_49869308_49870321
ES.4724.1	chr11	+	276	1	Intergenic	novelGene_3662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAGGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	49889071	49889347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_49889100_49889300
ES.4725.1	chr11	+	1876	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	-369	-5	-367	0	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGCGTGTGTTTCAGAG	NA	False	NA	29	True	NA	NA	NA	49915805	49995585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
ES.4725.10	chr11	+	3417	8	NIC	ENSMUSG00000020376.18	novel	1502	9	NA	NA	23	-18	intron_retention	FALSE	canonical	3	193	junction_7	44.6213090853439	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGTGTTGCTAAGTATC	NA	False	NA	6	True	NA	NA	NA	49916197	49995562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49986808_49990072_49990167_49995375
ES.4725.11	chr11	+	2277	8	NNC	ENSMUSG00000020376.18	novel	1415	8	NA	NA	34	6057	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	105.431668556909	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATGTCTTTCGATTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	49916208	50001642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50000534
ES.4725.12	chr11	+	1345	7	ISM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	45442	43	-22884	-43	3prime_fragment	FALSE	canonical	3	193	junction_6	46.6821402917885	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAATAAAA	NA	False	NA	-19	True	CATAAA	-26	NA	49961616	49995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
ES.4725.13	chr11	+	7690	1	NIC	ENSMUSG00000020376.18	novel	1415	8	NA	NA	776	-2614	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2165	False	NA	NA	False	NA	NA	NA	49985276	49992966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49985300_49993000
ES.4725.14	chr11	+	3064	2	ISM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	70491	2586	2165	-2586	internal_fragment	FALSE	canonical	3	207	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAGGACACAGGGAAAAA	3554	False	NA	NA	False	NA	NA	NA	49986665	49992994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_49986808_49990072
ES.4725.2	chr11	+	1674	10	NNC	ENSMUSG00000020376.18	novel	1502	9	NA	NA	-360	-43	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	94.6138350230968	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAATAAAA	NA	False	NA	-19	True	CATAAA	-26	NA	49915812	49995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49961997_49962040_49962186_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
ES.4725.3	chr11	+	1753	8	FSM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	-344	6	-344	-1	multi-exon	FALSE	canonical	3	67	junction_7	82.1161447249552	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCGCCAGCGTGTGTT	NA	False	NA	23	True	NA	NA	NA	49915828	49995579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
ES.4725.4	chr11	+	1225	8	NNC	ENSMUSG00000020376.18	novel	7879	8	NA	NA	-53	-6519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.873006320165	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTCACCTTTCTTA	NA	False	NA	NA	False	AAAAAG	-34	NA	49916119	50010027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49962186_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50009871
ES.4725.5	chr11	+	1246	9	NNC	ENSMUSG00000020376.18	novel	1502	9	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	115.722728968859	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCCTTCGCCAGCGTG	NA	False	NA	19	True	NA	NA	NA	49916184	49995575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49961997_49962040_49962186_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
ES.4725.6	chr11	+	1671	10	NNC	ENSMUSG00000020376.18	novel	1502	9	NA	NA	15	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	122.505127128784	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAATAAAA	NA	False	NA	-19	True	CATAAA	-26	NA	49916189	49995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49993258_49993486_49995375
ES.4725.7	chr11	+	1450	8	NNC	ENSMUSG00000020376.18	novel	1502	9	NA	NA	17	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.16304154085	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATCCTTCGCCAGCGTG	NA	False	NA	19	True	NA	NA	NA	49916191	49995575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976645_49984501_49984647_49986602_49986808_49990072_49990167_49995375
ES.4725.8	chr11	+	3174	8	FSM	ENSMUSG00000020376.18	ENSMUST00000238748.2	7879	8	23	4682	22	-4682	multi-exon	FALSE	canonical	3	19	junction_7	98.8135742141716	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGACAGTGTTTGAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	49916196	50011864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50009871
ES.4725.9	chr11	+	1040	6	NIC	ENSMUSG00000020376.18	novel	1415	8	NA	NA	23	-43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	119.695279773264	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAATAAAA	NA	False	NA	-19	True	CATAAA	-26	NA	49916197	49995537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49995375
ES.4726.1	chr11	-	176	1	Intergenic	novelGene_3663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAATGCCTG	NA	False	NA	NA	False	NA	NA	NA	49930452	49930276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_49930300_49930500
ES.4727.1	chr11	+	4438	20	NIC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-65	23	combination_of_known_splicesites	TRUE	canonical	3	18	junction_18	31.7647167454221	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTTCAGTCTGTGT	NA	False	NA	30	True	AATAAA	-43	NA	50022157	50062880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
ES.4727.11	chr11	+	4336	21	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-32	2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	33.4159767177319	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTGCAGTGCTTTT	NA	False	NA	9	True	AATAAA	-22	NA	50022190	50062859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.12	chr11	+	4279	20	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-31	3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	43.7954196368003	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTGCAGTGCTTTTC	NA	False	NA	10	True	AATAAA	-23	NA	50022191	50062860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
ES.4727.13	chr11	+	4196	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	34.6020510816653	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022192	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.14	chr11	+	5189	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-27	-755	-27	0	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	NA	False	NA	10	True	AATAAA	-18	NA	50022195	50063612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.15	chr11	+	5240	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-27	0	-27	0	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	NA	False	NA	10	True	AATAAA	-18	NA	50022195	50063612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.17	chr11	+	5128	20	NIC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-26	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTGTTTGTTTAAAGT	NA	False	NA	7	True	AATAAA	-15	NA	50022196	50063609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
ES.4727.18	chr11	+	4954	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-25	-522	-25	-233	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACTTTAAACTTTGC	NA	False	NA	NA	False	NA	NA	NA	50022197	50063379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.19	chr11	+	5079	21	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-24	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	33.4159767177319	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGTTTGTTTAAAGTA	NA	False	NA	8	True	AATAAA	-16	NA	50022198	50063610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.20	chr11	+	5259	22	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	44.9131184468055	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTTTGTTTGTTT	NA	False	NA	2	True	AATAAA	-10	NA	50022201	50063604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50056419_50056504_50058995_50059053_50059522_50059630_50061523
ES.4727.21	chr11	+	4391	21	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	34.8160882351823	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	NA	False	NA	-6	True	AATAAA	-7	NA	50022207	50062844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042163_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.22	chr11	+	5140	21	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	46.418180705409	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	NA	False	NA	10	True	AATAAA	-18	NA	50022208	50063612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049549_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058992_50059053_50059522_50059630_50061523
ES.4727.23	chr11	+	4119	26	Fusion	ENSMUSG00000036644.16_ENSMUSG00000020381.11	novel	5213	22	NA	NA	-10	-3	multi-exon	FALSE	canonical	0	0	junction_20	33.2990330189932	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCCTCTTGCTGCTACA	NA	False	NA	4	True	AATAAA	-14	NA	50022212	50090939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ES.4727.24	chr11	+	2156	7	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-9	21269	-9	555	5prime_fragment	FALSE	canonical	3	128	junction_6	10.6092203085597	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACTAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	50022213	50041588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528
ES.4727.25	chr11	+	4351	22	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-9	-11	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	49.7003720723194	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAAGCACACTGT	NA	False	NA	-4	True	AATAAA	-9	NA	50022213	50062846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.26	chr11	+	5231	22	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	45.7264864670997	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTTTGTTTGTTT	NA	False	NA	2	True	AATAAA	-10	NA	50022213	50063604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50037399_50037468_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.27	chr11	+	4425	21	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	34.6832452345509	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022214	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058985_50059053_50059522_50059630_50061523
ES.4727.3	chr11	+	4555	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	-65	723	-65	32	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTGTATGCTTTCT	NA	False	NA	39	True	AAAAAG	-32	NA	50022157	50062889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.30	chr11	+	4154	20	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	46.2920393651787	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022216	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042163_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.31	chr11	+	3439	22	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	1	-913	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	49.7003720723194	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTAGTCAGCACGGGC	NA	False	NA	NA	False	NA	NA	NA	50022223	50061944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.32	chr11	+	1718	1	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	1	-7344	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTAAGTCAGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	50022223	50023941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022200_50023900
ES.4727.34	chr11	+	4281	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36.0432181333355	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022229	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.35	chr11	+	4225	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	1	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	36.1245920334678	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	NA	False	NA	-6	True	AATAAA	-7	NA	50022229	50062844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.36	chr11	+	4105	21	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	56.7902060218133	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022229	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.37	chr11	+	4818	2	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	632	30738	626	724	internal_fragment	FALSE	canonical	3	150	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTTGTCAGGCTAACA	NA	False	NA	NA	False	NA	NA	NA	50022854	50032119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50026763_50031209
ES.4727.39	chr11	+	4130	19	NNC	ENSMUSG00000036644.16	novel	370	3	NA	NA	4407	-13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	45.3629056595424	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	5269	False	NA	-6	True	AATAAA	-7	NA	50030660	50062844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50030726_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
ES.4727.4	chr11	+	4979	20	NIC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	34.6020510816653	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	NA	False	NA	10	True	AATAAA	-18	NA	50022164	50063612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.40	chr11	+	4187	20	NNC	ENSMUSG00000036644.16	novel	370	3	NA	NA	4407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.0252296941357	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	5269	False	NA	7	True	AATAAA	-20	NA	50030660	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50030713_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.41	chr11	+	4214	21	NNC	ENSMUSG00000036644.16	novel	370	3	NA	NA	4418	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.5847845784006	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	5280	False	NA	-6	True	AATAAA	-7	NA	50030671	50062844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50030713_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ES.4727.42	chr11	+	4474	20	NNC	ENSMUSG00000036644.16	novel	370	3	NA	NA	4462	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.0252296941357	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	5324	False	NA	7	True	AATAAA	-20	NA	50030715	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50031052_50031206_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.43	chr11	+	4850	19	NNC	ENSMUSG00000036644.16	novel	5213	22	NA	NA	-4769	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	36.6991859162241	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	5849	False	NA	10	True	AATAAA	-18	NA	50031240	50063612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050530_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.44	chr11	+	174	1	Intergenic	novelGene_3664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	50037637	50037811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50037600_50037800
ES.4727.45	chr11	+	181	2	Intergenic	novelGene_3665	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	352	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGGGAGGGGGGCT	8004	False	NA	NA	False	NA	NA	NA	50047044	50105110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50047101_50104985
ES.4727.46	chr11	+	4232	9	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	-4763	0	intron_retention	FALSE	canonical	0	0	junction_6	64.8088535618398	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	8686	False	NA	7	True	AATAAA	-20	NA	50047726	50062857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50056594_50058698_50059053_50059522_50059630_50061523
ES.4727.47	chr11	+	2166	9	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	27017	13	-3250	-13	3prime_fragment	FALSE	canonical	3	113	junction_6	17.2875497107022	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	NA	False	NA	-6	True	AATAAA	-7	NA	50049239	50062844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.48	chr11	+	1931	7	ISM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	28246	16	-2021	-16	3prime_fragment	FALSE	canonical	3	113	junction_4	19.5085451362559	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAAGAAAGAAAAAGCAC	NA	False	NA	-9	True	AATAAA	-4	NA	50050468	50062841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.49	chr11	+	2379	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	-44	-1193	-44	1193	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCTAAC	NA	False	NA	NA	False	NA	NA	NA	50065631	50092135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ES.4727.5	chr11	+	4499	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	-58	-34	-58	34	multi-exon	FALSE	canonical	3	113	junction_18	14.0538251020852	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTATGCTTTCTTC	NA	False	NA	41	True	AAAAAG	-34	NA	50022164	50062891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ES.4727.50	chr11	+	1174	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	-31	-1	-31	1	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGCTGCTACACTCG	NA	False	NA	8	True	AATAAA	-18	NA	50065644	50090943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ES.4727.51	chr11	+	1167	8	NNC	ENSMUSG00000020381.11	novel	1142	7	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	77.526032494161	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGCTGCTACACT	NA	False	NA	6	True	AATAAA	-16	NA	50065706	50090941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50085717_50085775_50087770_50087920_50088445_50088531_50090362
ES.4727.52	chr11	+	4273	1	Intergenic	novelGene_3666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACGGGCTGGCAA	7534	False	NA	NA	False	NA	NA	NA	50078746	50083019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50078700_50083000
ES.4727.53	chr11	+	2118	4	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	19324	-1193	19266	1193	3prime_fragment	FALSE	canonical	3	164	junction_1	3.77123616632825	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCTAAC	NA	False	NA	NA	False	NA	NA	NA	50084999	50092135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50085111_50087770_50087920_50088445_50088531_50090362
ES.4727.54	chr11	+	180	1	Intergenic	novelGene_3667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGGGAGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	50104930	50105110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50104900_50105100
ES.4727.7	chr11	+	5368	26	Fusion	ENSMUSG00000036644.16_ENSMUSG00000020381.11	novel	5213	22	NA	NA	-47	1209	multi-exon	FALSE	canonical	0	0	junction_20	33.2990330189932	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCGTGTGTACTCGT	NA	False	NA	NA	False	ATTAAA	-14	NA	50022175	50092151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ES.4728.1	chr11	+	174	1	Intergenic	novelGene_3668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	50105128	50105302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50105100_50105300
ES.4729.1	chr11	-	2870	1	Antisense	novelGene_ENSMUSG00000036644.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCACCAAGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	50053924	50051054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_50051100_50053900
ES.473.1	chr1	+	2544	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	AATACA	-18	NA	54959357	54961901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_54959400_54961900
ES.4730.1	chr11	-	4887	7	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	1	650	combination_of_known_junctions	TRUE	canonical	3	696	junction_2	29.2859465728302	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGGGACTATATCTACC	NA	False	NA	NA	False	NA	NA	NA	50101617	50089542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.10	chr11	-	1996	8	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.494104027287	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCCCTGTGATCCGTA	NA	False	NA	-19	True	AATAAA	-17	NA	50101616	50090983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50091773_50093221_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.11	chr11	-	3447	7	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	696	junction_2	29.2859465728302	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCCCTGTGATCCGTA	NA	False	NA	-19	True	AATAAA	-17	NA	50101618	50090983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.13	chr11	-	3666	6	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	0	-5	intron_retention	FALSE	canonical	3	696	junction_1	26.7985074211233	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCCCTGTGATCCGTA	NA	False	NA	-19	True	AATAAA	-17	NA	50101618	50090983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.14	chr11	-	1986	8	NNC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	263.494104027287	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGCCCTGTGATCCGT	NA	False	NA	-20	True	AATAAA	-16	NA	50101618	50090984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50091775_50093234_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.17	chr11	-	3548	6	NIC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	1	7	intron_retention	FALSE	canonical	3	696	junction_2	31.5379136913018	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACCAGCCCTGTGATCC	NA	False	NA	-22	True	AATAAA	-14	NA	50101617	50090986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098464_50098647_50098744_50101379
ES.4730.18	chr11	-	1763	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	37	237	1	222	multi-exon	FALSE	canonical	0	0	junction_1	263.494104027287	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGGACTGTCCATAGT	NA	False	NA	-7	True	AATAAA	-12	NA	50101617	50091215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.19	chr11	-	1650	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	1023	0	222	multi-exon	FALSE	canonical	3	390	junction_1	128.516496201532	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGGGACTGTCCATAGT	NA	False	NA	-7	True	AATAAA	-12	NA	50101618	50091215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.2	chr11	-	3065	7	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	1	614	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	286.514349068633	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	50101617	50089578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50091775_50093339_50093422_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.20	chr11	-	3393	6	NIC	ENSMUSG00000015837.16	novel	1266	7	NA	NA	1	182	intron_retention	FALSE	canonical	3	696	junction_1	26.7985074211233	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGCTAGTTATTTTCA	NA	False	NA	-10	True	ATTAAA	-11	NA	50101617	50091255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.21	chr11	-	5357	4	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	37	1019	1	-560	intron_retention	FALSE	canonical	3	696	junction_2	36.3959704729338	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACTTATTTGTCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	50101617	50091997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986
ES.4730.22	chr11	-	6865	1	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	1	-1483	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGGGGAAGGGAGGTGG	NA	False	NA	NA	False	NA	NA	NA	50101617	50094752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50094800_50101600
ES.4730.23	chr11	-	5809	2	FSM	ENSMUSG00000015837.16	ENSMUST00000154805.2	585	2	-3471	-1753	1	-1483	multi-exon	FALSE	canonical	3	745	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGGGGAAGGGAGGTGG	NA	False	NA	NA	False	NA	NA	NA	50101617	50094752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50096931_50097986
ES.4730.24	chr11	-	1934	1	Intergenic	novelGene_3669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	50107997	50106063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_50106100_50108000
ES.4730.4	chr11	-	1895	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	-6	784	-6	2	multi-exon	FALSE	canonical	3	390	junction_1	128.516496201532	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGATCCGTACGAGTGT	NA	False	NA	-12	True	AATAAA	-24	NA	50101624	50090976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.5	chr11	-	2000	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	36	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	263.494104027287	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGTGATCCGTACGAG	NA	False	NA	-15	True	AATAAA	-21	NA	50101618	50090979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ES.4730.7	chr11	-	6303	5	NIC	ENSMUSG00000015837.16	novel	1266	7	NA	NA	1	-3	intron_retention	FALSE	canonical	3	696	junction_1	29.5550334122633	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCCTGTGATCCGTACG	NA	False	NA	-17	True	AATAAA	-19	NA	50101617	50090981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647
ES.4731.1	chr11	+	3014	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	-584	-1	-584	1	multi-exon	TRUE	canonical	3	193	junction_14	11.6647471695966	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTCATAGGTGAATG	NA	False	NA	14	True	AATAAA	-14	NA	50115577	50125931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.11	chr11	+	2362	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	53.7278193436936	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116183	50125930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124166_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.13	chr11	+	2404	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	54.4376164213006	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116185	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123204_50123382_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.14	chr11	+	2378	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	53.7278193436936	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116194	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124305_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.15	chr11	+	2802	13	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	34	0	intron_retention	FALSE	canonical	3	193	junction_12	11.957099239457	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116195	50125930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.16	chr11	+	2564	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	35	1	intron_retention	FALSE	canonical	3	193	junction_13	12.0923468388484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTCATAGGTGAATG	NA	False	NA	14	True	AATAAA	-14	NA	50116196	50125931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.17	chr11	+	2472	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	36	1	intron_retention	FALSE	canonical	3	193	junction_13	12.0923468388484	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTCATAGGTGAATG	NA	False	NA	14	True	AATAAA	-14	NA	50116197	50125931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125350_50125432
ES.4731.18	chr11	+	2337	14	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	74.8660342005844	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116199	50125930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123079_50123210_50123390_50123506_50123771_50123903_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.20	chr11	+	2559	13	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	40	-2	intron_retention	FALSE	canonical	3	194	junction_4	11.4197076242005	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTGTCTCATAGGTGA	NA	False	NA	11	True	AATAAA	-11	NA	50116201	50125928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236
ES.4731.21	chr11	+	2540	13	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	47	3	47	-3	intron_retention	FALSE	canonical	3	194	junction_5	11.8541483596812	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116208	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070
ES.4731.23	chr11	+	2418	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	66	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	54.5886285534537	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCTCATAGGTGAATG	NA	False	NA	14	True	AATAAA	-14	NA	50116227	50125931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123079_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.24	chr11	+	2555	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	71	-3	intron_retention	FALSE	canonical	3	193	junction_13	11.9396906583777	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116232	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.3	chr11	+	2532	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	-17	-3	intron_retention	FALSE	canonical	3	193	junction_13	11.5957551915146	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116144	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.5	chr11	+	3505	9	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	3	-3	intron_retention	FALSE	canonical	3	198	junction_8	11.7200415954893	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116164	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124989_50125070
ES.4731.6	chr11	+	2472	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	54.0855331670049	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATGTGTCTCATAGG	NA	False	NA	8	True	AATAAA	-8	NA	50116164	50125925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50123016_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.7	chr11	+	2450	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	54.2170618525051	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTGTCTCATAGGTG	NA	False	NA	10	True	AATAAA	-10	NA	50116164	50125927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116346_50116407_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.8	chr11	+	2509	14	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	56.2077717888501	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116164	50125930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123897_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4731.9	chr11	+	2392	15	NNC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	53.0711882324879	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGTATGTGTCTCATAG	NA	False	NA	7	True	AATAAA	-7	NA	50116166	50125924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50116541_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ES.4732.1	chr11	-	3363	3	Antisense	novelGene_ENSMUSG00000098474.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGTCATGGGTTGT	3141	False	NA	NA	False	NA	NA	NA	50124994	50119055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_50122168_50124371_50124496_50124867
ES.4733.1	chr11	+	4466	2	NNC	ENSMUSG00000097887.3	novel	611	2	NA	NA	-45	-21801	intron_retention	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTCACTGTTTCCCAGG	8134	False	NA	NA	False	NA	NA	NA	50127734	50132410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50130799_50131008
ES.4733.2	chr11	+	3168	1	NIC	ENSMUSG00000097887.3	novel	611	2	NA	NA	-3	-23208	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGAACATAGGATACAGG	8235	False	NA	NA	False	AAAAAG	-5	NA	50127835	50131003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50127800_50131000
ES.4733.3	chr11	+	861	3	NNC	ENSMUSG00000097887.3	novel	1235	3	NA	NA	8	0	intron_retention	FALSE	canonical	1	2	junction_2	0.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGAGTGTTGTACC	8246	False	NA	NA	False	AATAAA	-22	NA	50127846	50179666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50128207_50175242_50175315_50179237
ES.4733.4	chr11	+	158	1	Intergenic	novelGene_3670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAGCCAAAAAACAA	6709	False	NA	NA	False	NA	NA	NA	50154625	50154783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50154600_50154800
ES.4733.5	chr11	+	202	1	Intergenic	novelGene_3671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTTTTGGTAAGAGG	NA	False	NA	NA	False	NA	NA	NA	50173373	50173575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50173400_50173600
ES.4733.6	chr11	+	3647	1	NIC	ENSMUSG00000097887.3	novel	1235	3	NA	NA	45778	-2403	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAGGAGACACACA	NA	False	NA	NA	False	NA	NA	NA	50173616	50177263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50173600_50177300
ES.4734.1	chr11	-	5604	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	-70	-6	-70	6	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTTGACTTCAGTGGG	NA	False	NA	-2	True	AATAAA	-28	NA	50183208	50146454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
ES.4734.2	chr11	-	5651	6	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.7029181222678	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGCATGTTTGACTTC	NA	False	NA	-8	True	AATAAA	-22	NA	50183141	50146460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50181381_50181502_50182552
ES.4734.5	chr11	-	5518	5	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.5751756058534	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCACAAGCATGTTTGA	NA	False	NA	-12	True	AATAAA	-18	NA	50183138	50146464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50149656_50151803_50151901_50154076_50154305_50156421_50157838_50182552
ES.4734.6	chr11	-	5511	5	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.2701525564402	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAATCACAAGCATGTT	NA	False	NA	-15	True	AATAAA	-15	NA	50183133	50146467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50149656_50151803_50151889_50154069_50154311_50156421_50157838_50182552
ES.4734.8	chr11	-	5264	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	-3	267	-3	-267	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAAGATGGAATAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	50183141	50146727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
ES.4734.9	chr11	-	3721	5	NNC	ENSMUSG00000050567.17	novel	5528	5	NA	NA	-2	-1803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.5751756058534	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGGTGGTGGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	50183140	50148263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50149656_50151803_50151901_50154076_50154305_50156421_50157838_50182552
ES.4735.1	chr11	+	836	1	Intergenic	novelGene_3672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCATTGTGGTATACA	NA	False	NA	NA	False	NA	NA	NA	50192933	50193769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50192900_50193800
ES.4735.2	chr11	+	3408	2	Antisense	novelGene_ENSMUSG00000020368.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTTCAGGGTATGGTG	NA	False	NA	NA	False	NA	NA	NA	50192933	50196514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_50194132_50194304
ES.4735.3	chr11	+	5005	7	Antisense	novelGene_ENSMUSG00000020368.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGATCCTAACTTAAACA	NA	False	NA	NA	False	NA	NA	NA	50192933	50204475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_50195343_50198296_50198489_50199135_50199216_50199611_50199756_50201197_50201260_50201621_50201697_50202432
ES.4735.4	chr11	+	2678	2	Antisense	novelGene_ENSMUSG00000020368.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGATCCTAACTTAAACA	396	False	NA	NA	False	NA	NA	NA	50201061	50204475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_50201697_50202432
ES.4736.1	chr11	-	5110	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	22	-1353	22	847	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGTGACATGTTTGA	8158	False	NA	NA	False	AATAAA	-25	NA	50216478	50183940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.10	chr11	-	4095	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	66	-382	66	-124	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTATGCTGGACTCCT	8202	False	NA	NA	False	GATAAA	-16	NA	50216434	50184911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.100	chr11	-	3441	12	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	1201.48236953254	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8156	False	NA	-58	True	AATAAA	-18	NA	50216480	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50216319
ES.4736.101	chr11	-	3715	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	54	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1108.75692713479	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8190	False	NA	-58	True	AATAAA	-18	NA	50216446	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187157_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.102	chr11	-	3713	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1099.00967480096	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8191	False	NA	-58	True	AATAAA	-18	NA	50216445	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191875_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.103	chr11	-	3614	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	58	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8194	False	NA	-58	True	AATAAA	-18	NA	50216442	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185466_50185568_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.104	chr11	-	3668	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8195	False	NA	-58	True	AATAAA	-18	NA	50216441	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187954_50188137_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.106	chr11	-	3649	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGAATACATGTCTGC	8146	False	NA	-63	True	AATAAA	-13	NA	50216490	50185302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185636_50185746_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.107	chr11	-	3031	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1438.21295595147	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGAATACATGTCTGC	8202	False	NA	-63	True	AATAAA	-13	NA	50216434	50185302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186092_50186701_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202493_50202612_50216319
ES.4736.108	chr11	-	3303	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8202	False	NA	-64	True	AATAAA	-12	NA	50216434	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186495_50186894_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.11	chr11	-	3891	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	34	-146	34	146	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTGGTGGTCATTGC	8170	False	NA	92	True	NA	NA	NA	50216466	50185147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.111	chr11	-	2549	9	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	-3385	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1783.84205701486	4313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	7826	False	NA	-64	True	AATAAA	-12	NA	50195202	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185485_50185649_50187160_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152
ES.4736.113	chr11	-	5149	7	ISM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	21320	10	-3363	-10	intron_retention	FALSE	canonical	3	3898	junction_2	184.484868394854	4313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	7848	False	NA	-64	True	AATAAA	-12	NA	50195180	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584
ES.4736.114	chr11	-	4143	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	22	-10	intron_retention	FALSE	canonical	3	3893	junction_7	212.690151609603	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8158	False	NA	-64	True	AATAAA	-12	NA	50216478	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.115	chr11	-	3780	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	1404.59837517902	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8191	False	NA	-64	True	AATAAA	-12	NA	50216445	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50202847_50202914_50216319
ES.4736.116	chr11	-	6940	14	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	2	-10	intron_retention	FALSE	non_canonical	0	0	junction_6	1149.51839671173	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8138	False	NA	-64	True	AATAAA	-12	NA	50216498	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50190172_50191724_50191882_50192584_50194130_50194302_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.117	chr11	-	3710	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1108.75692713479	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8148	False	NA	-64	True	AATAAA	-12	NA	50216488	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187931_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.119	chr11	-	3728	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1105.27778390405	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8170	False	NA	-64	True	AATAAA	-12	NA	50216466	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199750_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.120	chr11	-	3690	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8148	False	NA	-64	True	AATAAA	-12	NA	50216488	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186123_50186189_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.121	chr11	-	3244	11	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	-7939	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1244.3375145032	4314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	9712	False	NA	-64	True	AATAAA	-12	NA	50199756	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199208_50199633
ES.4736.125	chr11	-	3756	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1109.0916489246	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8141	False	NA	-64	True	AATAAA	-12	NA	50216495	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192691_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.126	chr11	-	3667	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	70	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8206	False	NA	-64	True	AATAAA	-12	NA	50216430	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187970_50188137_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.129	chr11	-	3687	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGAATACATGTCTG	8170	False	NA	-64	True	AATAAA	-12	NA	50216466	50185303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185592_50185639_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.13	chr11	-	3817	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	-32	-6	-32	6	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTCTCCTTGAA	8104	False	NA	-48	True	AATAAA	-28	NA	50216532	50185287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.130	chr11	-	3697	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAATGAATACATGTCT	8170	False	NA	-65	True	AATAAA	-11	NA	50216466	50185304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187919_50188091_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.131	chr11	-	3551	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-133	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	4315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGAATGCATTTTTCT	8195	False	NA	NA	False	TATAAA	-20	NA	50216441	50185426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.132	chr11	-	3646	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	0	133	0	-133	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGAATGCATTTTTCT	8136	False	NA	NA	False	TATAAA	-20	NA	50216500	50185426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.136	chr11	-	3493	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-180	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1072.77340599599	4315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCTGTATCTGTTGTC	8191	False	NA	NA	False	AATATA	-12	NA	50216445	50185473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216319
ES.4736.137	chr11	-	3406	14	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	12	-180	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	4315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGCTGTATCTGTTGTC	8148	False	NA	NA	False	AATATA	-12	NA	50216488	50185473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ES.4736.138	chr11	-	3343	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	-50	486	-50	-486	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8086	False	NA	-2	True	AATAAA	-23	NA	50216550	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.139	chr11	-	3325	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-486	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_15	1404.59837517902	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8170	False	NA	-2	True	AATAAA	-23	NA	50216466	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50202847_50202914_50216319
ES.4736.14	chr11	-	3755	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCAGGTTTCTCCTTG	8170	False	NA	-50	True	AATAAA	-26	NA	50216466	50185289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192705_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.140	chr11	-	3211	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	57	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1108.75692713479	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8193	False	NA	-2	True	AATAAA	-23	NA	50216443	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187143_50187889_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.141	chr11	-	3121	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1375.46896083562	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8195	False	NA	-2	True	AATAAA	-23	NA	50216441	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186493_50186569_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.147	chr11	-	3209	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	33	-486	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1072.77340599599	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8169	False	NA	-2	True	AATAAA	-23	NA	50216467	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216319
ES.4736.148	chr11	-	3193	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	45	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1106.10944397054	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8181	False	NA	-2	True	AATAAA	-23	NA	50216455	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195288_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.149	chr11	-	2792	12	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	44	-486	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1246.56094850878	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8180	False	NA	-2	True	AATAAA	-23	NA	50216456	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.150	chr11	-	2234	8	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	-3173	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1453.51934620628	4304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8038	False	NA	-2	True	AATAAA	-23	NA	50194990	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192705_50194953
ES.4736.152	chr11	-	3255	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	2	-486	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8138	False	NA	-2	True	AATAAA	-23	NA	50216498	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.153	chr11	-	2706	10	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	13	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1303.05815035626	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8149	False	NA	-2	True	AATAAA	-23	NA	50216487	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50216355
ES.4736.154	chr11	-	3265	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8170	False	NA	-2	True	AATAAA	-23	NA	50216466	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192705_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.155	chr11	-	3099	14	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	13	-486	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8149	False	NA	-2	True	AATAAA	-23	NA	50216487	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ES.4736.157	chr11	-	2930	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	20	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8156	False	NA	-2	True	AATAAA	-23	NA	50216480	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186572_50186914_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.159	chr11	-	2844	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8191	False	NA	-2	True	AATAAA	-23	NA	50216445	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186271_50186664_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.160	chr11	-	3023	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	54	-486	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1149.36091838467	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8190	False	NA	-2	True	AATAAA	-23	NA	50216446	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.162	chr11	-	3180	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1498.43044584005	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8195	False	NA	-2	True	AATAAA	-23	NA	50216441	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187960_50188100_50188173_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.163	chr11	-	4824	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	22	-486	intron_retention	FALSE	canonical	3	3893	junction_6	206.785341634249	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8158	False	NA	-2	True	AATAAA	-23	NA	50216478	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.164	chr11	-	5681	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-486	intron_retention	FALSE	canonical	3	3898	junction_2	195.127116813569	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8202	False	NA	-2	True	AATAAA	-23	NA	50216434	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.168	chr11	-	3180	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1500.0353414204	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8148	False	NA	-2	True	AATAAA	-23	NA	50216488	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192700_50195152_50195343_50198296_50198388_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.17	chr11	-	3760	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8119	False	NA	-54	True	AATAAA	-22	NA	50216517	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.172	chr11	-	3229	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	13	-486	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1109.10624295568	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8149	False	NA	-2	True	AATAAA	-23	NA	50216487	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187935_50188121_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.173	chr11	-	3254	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	27	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1105.27778390405	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8163	False	NA	-2	True	AATAAA	-23	NA	50216473	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201210_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.174	chr11	-	3256	17	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	1	-486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1652.26925393533	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8137	False	NA	-2	True	AATAAA	-23	NA	50216499	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186733_50186884_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210740_50210857_50216319
ES.4736.175	chr11	-	5515	13	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-486	intron_retention	FALSE	canonical	3	3893	junction_5	202.491563610273	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8170	False	NA	-2	True	AATAAA	-23	NA	50216466	50185779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.176	chr11	-	3229	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	13	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8149	False	NA	-12	True	AATAAA	-13	NA	50216487	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186857_50186897_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.177	chr11	-	3054	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	64	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8200	False	NA	-12	True	AATAAA	-13	NA	50216436	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186720_50186884_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.178	chr11	-	3215	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	43	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1503.93525289421	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8179	False	NA	-12	True	AATAAA	-13	NA	50216457	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187970_50188131_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192700_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.179	chr11	-	3264	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8170	False	NA	-12	True	AATAAA	-13	NA	50216466	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192714_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.181	chr11	-	3180	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8202	False	NA	-12	True	AATAAA	-13	NA	50216434	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185983_50186019_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.182	chr11	-	3254	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1107.73549115633	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8148	False	NA	-12	True	AATAAA	-13	NA	50216488	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189060_50189968_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.183	chr11	-	3164	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8195	False	NA	-12	True	AATAAA	-13	NA	50216441	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186572_50186631_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.185	chr11	-	3179	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1106.10944397054	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8170	False	NA	-12	True	AATAAA	-13	NA	50216466	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198366_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.186	chr11	-	3090	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1441.16126632503	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8170	False	NA	-12	True	AATAAA	-13	NA	50216466	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186251_50186406_50187163_50187884_50187962_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.188	chr11	-	3069	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1106.10944397054	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8170	False	NA	-12	True	AATAAA	-13	NA	50216466	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195184_50198317_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.189	chr11	-	3251	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1107.92524429168	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8202	False	NA	-12	True	AATAAA	-13	NA	50216434	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198524_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.19	chr11	-	3681	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8170	False	NA	-54	True	AATAAA	-22	NA	50216466	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185473_50185536_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.194	chr11	-	3158	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	57	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8193	False	NA	-12	True	AATAAA	-13	NA	50216443	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186656_50186723_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.196	chr11	-	3140	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8195	False	NA	-12	True	AATAAA	-13	NA	50216441	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192620_50195157_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.198	chr11	-	3288	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	13	-496	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	1105.29966386441	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8149	False	NA	-12	True	AATAAA	-13	NA	50216487	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187983_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.199	chr11	-	3200	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	46	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1108.75692713479	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8182	False	NA	-12	True	AATAAA	-13	NA	50216454	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187173_50187931_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.2	chr11	-	4305	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	5	-531	5	25	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAATGGTTAATTTAGTC	8141	False	NA	22	True	NA	NA	NA	50216495	50184762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.200	chr11	-	3101	14	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	13	-496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1146.26507462357	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8149	False	NA	-12	True	AATAAA	-13	NA	50216487	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50199112_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.201	chr11	-	3130	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-496	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1386.6170420951	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8202	False	NA	-12	True	AATAAA	-13	NA	50216434	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216355
ES.4736.202	chr11	-	3056	14	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	10	-496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1130.45263490485	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8146	False	NA	-12	True	AATAAA	-13	NA	50216490	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216355
ES.4736.203	chr11	-	5509	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8191	False	NA	-12	True	AATAAA	-13	NA	50216445	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50194130_50194302_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.204	chr11	-	2997	18	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-496	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1802.48327166625	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8195	False	NA	-12	True	AATAAA	-13	NA	50216441	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186424_50186473_50186567_50186656_50186707_50186766_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198463_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.205	chr11	-	6309	13	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	150	-496	intron_retention	FALSE	canonical	3	3898	junction_1	194.171888341805	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8286	False	NA	-12	True	AATAAA	-13	NA	50216350	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.206	chr11	-	3323	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	54	-496	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	1439.99299381012	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8190	False	NA	-12	True	AATAAA	-13	NA	50216446	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210560_50210655_50216319
ES.4736.207	chr11	-	3343	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	56	-496	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	1442.51764479869	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	8192	False	NA	-12	True	AATAAA	-13	NA	50216444	50185789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210740_50210857_50216319
ES.4736.212	chr11	-	3247	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	24	-502	at_least_one_novel_splicesite	FALSE	canonical	1	119	junction_3	1076.8811732148	4307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTTCAAAAAAAAAATTTT	8160	False	NA	-18	True	AATAAA	-7	NA	50216476	50185795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188216_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.213	chr11	-	2591	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	38	581	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1107.92524429168	4273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACTTTGACTTGGTCAT	8174	False	NA	NA	False	AATAGA	-18	NA	50216462	50186444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198491_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.215	chr11	-	2519	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	-17	1277	-17	455	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTGTTTTGTGTGCTT	8119	False	NA	30	True	NA	NA	NA	50216517	50186570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.216	chr11	-	2222	14	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	66	422	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	4260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACGTTCAAGTGCAGT	8202	False	NA	-3	True	ATTAAA	-27	NA	50216434	50186603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ES.4736.218	chr11	-	5492	13	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	150	419	intron_retention	FALSE	canonical	3	3898	junction_1	194.171888341805	4260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAATCACGTTCAAGTGC	8286	False	NA	-6	True	ATTAAA	-24	NA	50216350	50186606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.220	chr11	-	2331	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	44	415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1415.26378157168	4260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAATCACGTTCAA	8180	False	NA	-10	True	ATTAAA	-20	NA	50216456	50186610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195318_50198322_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.221	chr11	-	2390	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	33	415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1702.28329856444	4260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAATCACGTTCAA	8169	False	NA	-10	True	ATTAAA	-20	NA	50216467	50186610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188104_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192700_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.223	chr11	-	3319	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	414	intron_retention	FALSE	canonical	3	3893	junction_6	215.35425610213	4260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGTAATCACGTTCA	8170	False	NA	-11	True	ATTAAA	-19	NA	50216466	50186611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.224	chr11	-	2273	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1109.04402895614	4260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTGTAATCACGTTCA	8195	False	NA	-11	True	ATTAAA	-19	NA	50216441	50186611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190109_50191790_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.226	chr11	-	2187	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	34	1558	34	174	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGTGTTTTGTTGTTTT	8170	False	NA	NA	False	AAAACA	-39	NA	50216466	50186851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.227	chr11	-	2123	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	58	173	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	1408.3211238049	4245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTAGTGTTTTGTTGTTT	8194	False	NA	NA	False	AAAACA	-38	NA	50216442	50186852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187962_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.25	chr11	-	3597	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8137	False	NA	-54	True	AATAAA	-22	NA	50216499	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ES.4736.27	chr11	-	3753	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	1105.29966386441	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8180	False	NA	-54	True	AATAAA	-22	NA	50216456	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187983_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.28	chr11	-	3313	12	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	1230.67999076503	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8185	False	NA	-54	True	AATAAA	-22	NA	50216451	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.29	chr11	-	5273	14	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	0	intron_retention	FALSE	non_canonical	0	0	junction_11	1137.86396478967	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8191	False	NA	-54	True	AATAAA	-22	NA	50216445	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201254_50201620_50201695_50202430_50202612_50216319
ES.4736.3	chr11	-	4233	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	20	4	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATGTTTTTACTGTT	8156	False	NA	1	True	ATTAAA	-27	NA	50216480	50184783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.31	chr11	-	3733	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8138	False	NA	-54	True	AATAAA	-22	NA	50216498	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185450_50185493_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.32	chr11	-	3703	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	1071.55122447164	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8159	False	NA	-54	True	AATAAA	-22	NA	50216477	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202489_50202541_50202612_50216319
ES.4736.35	chr11	-	3840	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1696.25389084955	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8166	False	NA	-54	True	AATAAA	-22	NA	50216470	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187160_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210560_50210655_50216319
ES.4736.36	chr11	-	3628	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8202	False	NA	-54	True	AATAAA	-22	NA	50216434	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186886_50186970_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.38	chr11	-	3694	14	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1150.57441275649	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8180	False	NA	-54	True	AATAAA	-22	NA	50216456	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187202_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.41	chr11	-	4637	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	0	intron_retention	FALSE	canonical	3	3893	junction_6	215.35425610213	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8170	False	NA	-54	True	AATAAA	-22	NA	50216466	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.42	chr11	-	3692	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1107.73549115633	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8209	False	NA	-54	True	AATAAA	-22	NA	50216427	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189046_50189951_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.43	chr11	-	3714	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1072.77340599599	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8150	False	NA	-54	True	AATAAA	-22	NA	50216486	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216319
ES.4736.46	chr11	-	5996	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1109.0916489246	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8200	False	NA	-54	True	AATAAA	-22	NA	50216436	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50194130_50194302_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.47	chr11	-	3709	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1107.73549115633	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8193	False	NA	-54	True	AATAAA	-22	NA	50216443	50185293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189968_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.48	chr11	-	5913	5	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	-1843	-1	intron_retention	FALSE	canonical	3	3898	junction_1	206.464282625349	4313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTCTGCAGGTTTCT	9368	False	NA	-55	True	AATAAA	-21	NA	50193660	50185294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187965_50188100_50188222_50188943_50189064_50189955_50191882_50192584
ES.4736.53	chr11	-	3758	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1102.99414628306	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8148	False	NA	-56	True	AATAAA	-20	NA	50216488	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199212_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.54	chr11	-	3604	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	1140.49486819481	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8195	False	NA	-56	True	AATAAA	-20	NA	50216441	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.55	chr11	-	3648	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8149	False	NA	-56	True	AATAAA	-20	NA	50216487	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185453_50185568_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.57	chr11	-	3661	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8191	False	NA	-56	True	AATAAA	-20	NA	50216445	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185508_50185568_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.58	chr11	-	3678	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1688.02833572847	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8182	False	NA	-56	True	AATAAA	-20	NA	50216454	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199190_50199700_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210794_50210857_50216319
ES.4736.59	chr11	-	3628	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1102.99414628306	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8167	False	NA	-56	True	AATAAA	-20	NA	50216469	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199732_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.60	chr11	-	3832	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	1405.11947139341	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8170	False	NA	-56	True	AATAAA	-20	NA	50216466	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50202847_50202937_50216319
ES.4736.62	chr11	-	5116	6	ISM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	22064	2	-2619	-2	intron_retention	FALSE	canonical	3	3898	junction_2	103.758180400391	4313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8592	False	NA	-56	True	AATAAA	-20	NA	50194436	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724
ES.4736.65	chr11	-	3664	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8195	False	NA	-56	True	AATAAA	-20	NA	50216441	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187911_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.67	chr11	-	5740	6	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	-2393	-2	intron_retention	FALSE	canonical	3	3898	junction_2	191.957703674533	4313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8818	False	NA	-56	True	AATAAA	-20	NA	50194210	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50191882_50192584
ES.4736.70	chr11	-	7664	12	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-2	intron_retention	FALSE	canonical	0	0	junction_7	1242.22536915352	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8170	False	NA	-56	True	AATAAA	-20	NA	50216466	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50191882_50192584_50192699_50195152_50195343_50198296_50198524_50199136_50199219_50199614_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.72	chr11	-	3838	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	1442.51764479869	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8191	False	NA	-56	True	AATAAA	-20	NA	50216445	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50210740_50210857_50216319
ES.4736.73	chr11	-	3649	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	22	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1375.46896083562	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8158	False	NA	-56	True	AATAAA	-20	NA	50216478	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185994_50186063_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.75	chr11	-	3706	14	NIC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	162	junction_11	1090.53187718101	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTCTGCAGGTTTC	8148	False	NA	-56	True	AATAAA	-20	NA	50216488	50185295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201620_50201695_50202430_50202612_50216319
ES.4736.77	chr11	-	4960	14	ISM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	12524	3	-12159	-3	3prime_fragment	FALSE	canonical	3	3893	junction_7	211.881986802467	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTCTGCAGGTTT	8076	False	NA	-57	True	AATAAA	-19	NA	50203976	50185296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430
ES.4736.80	chr11	-	3643	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	55	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1375.46896083562	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTCTGCAGGTTT	8191	False	NA	-57	True	AATAAA	-19	NA	50216445	50185296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185463_50185504_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.81	chr11	-	3673	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1467.65222935358	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTCTGCAGGTTT	8141	False	NA	-57	True	AATAAA	-19	NA	50216495	50185296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187116_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216319
ES.4736.82	chr11	-	3631	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1386.6170420951	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTCTGCAGGTTT	8194	False	NA	-57	True	AATAAA	-19	NA	50216442	50185296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216355
ES.4736.84	chr11	-	3665	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	24	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTCTGCAGGTTT	8160	False	NA	-57	True	AATAAA	-19	NA	50216476	50185296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187935_50188157_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.86	chr11	-	2228	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8148	False	NA	-58	True	AATAAA	-18	NA	50216488	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50185319_50186853_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.87	chr11	-	3730	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1109.10624295568	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8170	False	NA	-58	True	AATAAA	-18	NA	50216466	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187954_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.88	chr11	-	3720	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1105.27778390405	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8170	False	NA	-58	True	AATAAA	-18	NA	50216466	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201219_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.89	chr11	-	3721	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	46	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1106.10944397054	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8182	False	NA	-58	True	AATAAA	-18	NA	50216454	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195335_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.9	chr11	-	4095	14	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCATAACACTGAATGTT	8140	False	NA	-8	True	ATTAAA	-18	NA	50216496	50184792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ES.4736.91	chr11	-	2916	11	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1306.44113529849	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8202	False	NA	-58	True	AATAAA	-18	NA	50216434	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186901_50191718_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.92	chr11	-	3590	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8169	False	NA	-58	True	AATAAA	-18	NA	50216467	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186470_50186621_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.93	chr11	-	3698	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1097.36417038692	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8202	False	NA	-58	True	AATAAA	-18	NA	50216434	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201697_50202443_50202612_50216319
ES.4736.94	chr11	-	3705	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1420.02282426325	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8150	False	NA	-58	True	AATAAA	-18	NA	50216486	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187134_50187875_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4736.96	chr11	-	3691	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	66	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1107.92524429168	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8202	False	NA	-58	True	AATAAA	-18	NA	50216434	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198472_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.97	chr11	-	3460	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8181	False	NA	-58	True	AATAAA	-18	NA	50216455	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186204_50186473_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.98	chr11	-	3621	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	91	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1071.55122447164	4316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8227	False	NA	-58	True	AATAAA	-18	NA	50216409	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186027_50186089_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ES.4736.99	chr11	-	3656	16	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1375.46896083562	4316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACATGTCTGCAGGTT	8181	False	NA	-58	True	AATAAA	-18	NA	50216455	50185297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50186689_50186726_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
ES.4737.1	chr11	+	3045	3	Intergenic	novelGene_3673	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCACTGTGTCTGTGCC	3441	False	NA	NA	False	NA	NA	NA	50216739	50226884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50216880_50217699_50217765_50224044
ES.4738.1	chr11	-	178	1	Intergenic	novelGene_3674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTTTTTCGAGA	5561	False	NA	NA	False	NA	NA	NA	50219075	50218897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_50218900_50219100
ES.4739.1	chr11	+	175	1	Intergenic	novelGene_3675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAATAAA	4099	False	NA	NA	False	NA	NA	NA	50236162	50236337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50236200_50236300
ES.474.1	chr1	+	177	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	54987090	54987267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_54987100_54987300
ES.4740.1	chr11	-	6713	3	Genic_Genomic	ENSMUSG00000076450.3	novel	95	1	NA	NA	-1165	5689	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTTGCAGAAGTTAC	2988	False	NA	NA	False	AATAAA	-17	NA	50249871	50242922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_50243699_50243736_50243956_50244153
ES.4741.1	chr11	-	174	1	Intergenic	novelGene_3676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGAGGTGTTA	565	False	NA	NA	False	NA	NA	NA	50252294	50252120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_50252100_50252300
ES.4742.1	chr11	+	2962	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	-731	-6	-2	5	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGCTTTAGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	50267814	50277360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.10	chr11	+	4838	11	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-13	0	intron_retention	FALSE	canonical	3	42	junction_8	153.905945304267	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268532	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.11	chr11	+	2208	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268532	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.12	chr11	+	4540	11	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	130	junction_1	122.318477753772	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268538	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.13	chr11	+	2230	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	159.2369378218	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	50268544	50277347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.14	chr11	+	3107	12	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-1	1	intron_retention	FALSE	canonical	3	44	junction_9	150.397709671325	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTGTGCTTTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	50268544	50277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ES.4742.15	chr11	+	4721	11	NIC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	42	junction_8	154.284315469849	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268544	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.16	chr11	+	5670	9	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_1	125.564724345654	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268545	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.18	chr11	+	2190	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	143.862401385992	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	False	NA	NA	False	AATAAA	-11	NA	50268552	50277347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.19	chr11	+	4628	12	NNC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	8	-1	intron_retention	FALSE	canonical	3	30	junction_5	151.316208785848	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268553	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.2	chr11	+	4857	13	NNC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	-2	0	intron_retention	TRUE	canonical	1	3	junction_2	182.720243815512	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50267814	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50267975_50268140_50268268_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276607
ES.4742.20	chr11	+	6707	6	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	8	0	intron_retention	FALSE	canonical	3	130	junction_1	134.880094899136	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268553	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506
ES.4742.21	chr11	+	2075	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	143.551457092338	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268556	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.22	chr11	+	4822	11	NNC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	11	-1	intron_retention	FALSE	canonical	3	30	junction_4	156.139552964648	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268556	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.23	chr11	+	5714	8	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	130	junction_1	134.179441230688	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268556	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.24	chr11	+	4844	11	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	11	0	intron_retention	FALSE	canonical	3	130	junction_1	113.03189815269	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268556	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.25	chr11	+	5511	9	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	130	junction_1	132.160886800899	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268562	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.26	chr11	+	2100	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	161.39126026179	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268562	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.27	chr11	+	1964	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	18	243	-14	-37	multi-exon	FALSE	canonical	3	130	junction_1	115.462537790991	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGTTAATTCTAAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	50268563	50277111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.28	chr11	+	5634	7	NIC	ENSMUSG00000007850.17	novel	4577	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	24	junction_6	170.22574880304	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268585	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50275564_50276603
ES.4742.29	chr11	+	2210	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	136.035411331369	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268591	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.3	chr11	+	4700	12	FSM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	-90	-608	-40	1	multi-exon	FALSE	canonical	3	130	junction_1	114.133747843021	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTGTGCTTTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	50268505	50277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.30	chr11	+	6265	7	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_1	135.627451334734	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268591	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50275564_50275967
ES.4742.32	chr11	+	5530	10	NIC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	130	junction_1	119.134636980162	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268594	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50275564_50275967_50276018_50276603
ES.4742.33	chr11	+	1963	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-1	-39	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	136.035411331369	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTGTTAATTCTAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	50268594	50277109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.34	chr11	+	4950	9	NIC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	130	junction_1	125.513694471958	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACTCTGTCTGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50268595	50277352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.35	chr11	+	2148	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	148.830549768449	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268604	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272408_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.36	chr11	+	4592	12	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_9	174.781942067043	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268604	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274709_50275470_50275564_50275967_50276018_50276603
ES.4742.37	chr11	+	2094	12	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_11	160.135892704388	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268622	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50276603
ES.4742.38	chr11	+	5356	9	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	28	0	intron_retention	FALSE	canonical	3	234	junction_1	81.1817982986334	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268623	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.39	chr11	+	6078	8	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	29	0	intron_retention	FALSE	canonical	3	234	junction_1	85.7954377741447	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268624	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.4	chr11	+	4669	12	NIC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	-40	0	intron_retention	FALSE	canonical	3	42	junction_9	149.337490103501	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268505	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.40	chr11	+	2204	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	133.201631207028	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTGTGCTTTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	50268624	50277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.41	chr11	+	4605	12	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	29	0	intron_retention	FALSE	canonical	3	26	junction_1	165.202805491156	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268624	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.42	chr11	+	5183	9	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	30	0	intron_retention	FALSE	canonical	3	24	junction_8	172.330351360403	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268625	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50276603
ES.4742.43	chr11	+	3571	12	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	30	-1	intron_retention	FALSE	canonical	3	224	junction_3	97.577263304776	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268625	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.44	chr11	+	2197	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.276584529306	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268626	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268822_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.45	chr11	+	2299	14	NNC	ENSMUSG00000007850.17	novel	1724	12	NA	NA	70	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.150077042983	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTGTGCTTTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	50268665	50277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268822_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.46	chr11	+	2438	13	ISM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	275	0	225	0	3prime_fragment	FALSE	canonical	3	224	junction_3	98.8039585351833	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268820	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.47	chr11	+	5916	7	NIC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	246	-1	intron_retention	FALSE	canonical	3	234	junction_1	91.9016684650865	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268841	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.48	chr11	+	2393	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	137.200051627784	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268844	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.49	chr11	+	5026	10	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-255	0	intron_retention	FALSE	canonical	3	234	junction_1	76.6117355546222	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268862	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.5	chr11	+	3755	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-36	0	intron_retention	FALSE	canonical	3	130	junction_1	113.265052960841	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268509	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.51	chr11	+	2218	12	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-216	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	133.00860594788	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268901	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.52	chr11	+	2195	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-61	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	140.355179415969	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTGTGCTTTAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	50269056	50277356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274558_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.53	chr11	+	4573	11	ISM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	520	-603	-2	-3	3prime_fragment	FALSE	canonical	3	234	junction_1	87.0266625810734	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACACTCTGTCTGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	50269115	50277351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.54	chr11	+	5552	8	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	234	junction_1	85.0860308926279	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50269115	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273889_50274005_50274142_50274506_50274567_50274657_50275564_50275967_50276018_50276603
ES.4742.55	chr11	+	4614	9	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	97	0	intron_retention	FALSE	canonical	3	24	junction_8	140.861135076358	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50269224	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50269255_50270294_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
ES.4742.56	chr11	+	3693	10	NIC	ENSMUSG00000007850.17	novel	1724	12	NA	NA	1167	-2	intron_retention	FALSE	canonical	3	270	junction_1	67.2377392559187	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACACTCTGTCTGTGCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50270294	50277352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.57	chr11	+	1833	11	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	1278	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	140.897870814289	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50270405	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ES.4742.58	chr11	+	6778	2	ISM	ENSMUSG00000007850.17	ENSMUST00000141668.8	832	3	-3317	-2264	1329	-3	intron_retention	FALSE	canonical	3	470	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACACTCTGTCTGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	50270456	50277351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50273889_50274005
ES.4742.59	chr11	+	4448	8	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	1409	0	intron_retention	FALSE	canonical	3	385	junction_5	41.4408848696008	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50270536	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273543_50273626_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.6	chr11	+	2101	13	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	173.382745360918	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268525	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270808_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.60	chr11	+	4459	8	NNC	ENSMUSG00000007850.17	novel	4002	12	NA	NA	1409	-3	intron_retention	FALSE	canonical	3	30	junction_2	153.037677100265	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACACTCTGTCTGTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	50270536	50277351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.61	chr11	+	4326	8	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	1416	0	intron_retention	FALSE	canonical	3	44	junction_5	148.280071458833	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50270543	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ES.4742.62	chr11	+	4944	5	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	1812	0	intron_retention	FALSE	canonical	3	463	junction_2	15.2212844398888	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50270939	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273889_50274005_50274142_50274506_50275564_50275967_50276018_50276603
ES.4742.63	chr11	+	4556	4	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-1513	0	intron_retention	FALSE	canonical	3	395	junction_1	33.8263539599263	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50272260	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273699_50273754_50273889_50274005_50274142_50274506
ES.4742.64	chr11	+	3924	4	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-1450	0	intron_retention	FALSE	canonical	3	470	junction_1	12.684198393627	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50272323	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273889_50274005_50275564_50275967_50276018_50276603
ES.4742.65	chr11	+	2295	9	ISM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	3794	-362	-1384	-38	3prime_fragment	FALSE	canonical	3	385	junction_6	42.5820898383346	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTGTTAATTCTAAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	50272389	50277110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.66	chr11	+	4965	1	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	-1383	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50272390	50277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50272400_50277400
ES.4742.67	chr11	+	1151	9	NIC	ENSMUSG00000007850.17	novel	1724	12	NA	NA	-270	-38	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	139.773701031346	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTGTTAATTCTAAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	50273503	50277110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
ES.4742.68	chr11	+	1073	7	ISM	ENSMUSG00000007850.17	ENSMUST00000134230.8	1724	12	4625	-361	-21	-37	3prime_fragment	FALSE	canonical	3	385	junction_4	39.3728614939557	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTGTTAATTCTAAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	50273752	50277111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.7	chr11	+	5889	10	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	30	junction_3	159.167355049898	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268530	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269117_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4742.8	chr11	+	2221	13	NNC	ENSMUSG00000007850.17	novel	2126	13	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	150.110769285736	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTCTGTCTGTGCTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	50268530	50277353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50276603
ES.4742.9	chr11	+	3178	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	-14	0	intron_retention	FALSE	canonical	3	130	junction_1	117.253287089673	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268531	50277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ES.4743.1	chr11	+	209	1	Intergenic	novelGene_3677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCTTTGGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	50286946	50287155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50286900_50287200
ES.4744.1	chr11	-	7995	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	10	-5317	10	5317	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGATATAAATGTTTT	4159	False	NA	NA	False	ATTAAA	-31	NA	50321942	50274795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ES.4744.10	chr11	-	4403	18	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	310	-18	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	14.9432606235147	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCTTGTACAGACAAAGT	4459	False	NA	-18	True	AATAAA	-14	NA	50321642	50280130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50300795_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ES.4744.11	chr11	-	3890	15	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-16	-3296	combination_of_known_junctions	FALSE	canonical	3	21	junction_14	13.7040512407158	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAAGGTTCCCCTCAG	789	False	NA	NA	False	NA	NA	NA	50312834	50283495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.12	chr11	-	2137	16	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-28	-5214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	25.7764750628682	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGTACACTGTAGCTG	777	False	NA	NA	False	ATTAAA	-17	NA	50312846	50285413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50300645_50300795_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312738
ES.4744.13	chr11	-	5032	7	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-12	-371	intron_retention	FALSE	canonical	3	10	junction_1	24.4108354811729	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGGCAGATTTCTGT	793	False	NA	NA	False	ATTAAA	-18	NA	50312830	50299105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50300795_50301392_50301463_50305343_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.2	chr11	-	3235	19	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-56	4445	intron_retention	FALSE	canonical	0	0	junction_1	19.0211058862465	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAACAACATTTAAA	749	False	NA	NA	False	NA	NA	NA	50312874	50275667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50276881_50280568_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.3	chr11	-	2890	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-57	411	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	748	False	NA	NA	False	NA	NA	NA	50312875	50279701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.4	chr11	-	2684	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	1	3	1	-3	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCTGGCCTCCAGCTT	4150	False	NA	-3	True	AATAAA	-29	NA	50321951	50280115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ES.4744.5	chr11	-	2473	18	NIC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-58	-7	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	12.7347167373532	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTGCTGGCCTCCA	747	False	NA	-7	True	AATAAA	-25	NA	50312876	50280119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.6	chr11	-	4385	17	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.1053970967824	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTGCTGGCCTCCA	783	False	NA	-7	True	AATAAA	-25	NA	50312840	50280119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50280786_50281120_50281199_50282845_50282895_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50300795_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50312742
ES.4744.7	chr11	-	3243	18	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	17.191170180646	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGACAAAGTGCTGGCCT	4149	False	NA	-10	True	AATAAA	-22	NA	50321952	50280122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50311115_50311203_50311322_50312456_50312631_50321610
ES.4744.8	chr11	-	3103	18	NNC	ENSMUSG00000020375.10	novel	2688	18	NA	NA	-117	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.3345125271851	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGACAAAGTGCTGGCC	4032	False	NA	-11	True	AATAAA	-21	NA	50322069	50280123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50280786_50281120_50281199_50282845_50282895_50285442_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307062_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ES.4745.1	chr11	+	5079	21	FSM	ENSMUSG00000036545.10	ENSMUST00000142118.3	5079	21	-1	1	-1	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.07121426428143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTTTGCTCGGCTG	NA	False	NA	NA	False	AATAAA	-29	NA	50492909	50689172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50493127_50494063_50494459_50558817_50558978_50627992_50628196_50647522_50647607_50664043_50664201_50666140_50666247_50666945_50667090_50667448_50667582_50667957_50668072_50670519_50670666_50672531_50672708_50675429_50675564_50676374_50676499_50677412_50677494_50678015_50678183_50679481_50679642_50682629_50682763_50683472_50683681_50686144_50686275_50687265
ES.4745.2	chr11	+	4712	20	NNC	ENSMUSG00000036545.10	novel	368	3	NA	NA	64850	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.0989796325169	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAACTGGGAGCTTGGGT	NA	False	NA	NA	False	AATAAA	-18	NA	50557760	50689161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50558017_50558817_50558978_50627992_50628196_50647522_50647607_50664043_50664201_50666140_50666247_50666945_50667090_50667448_50667582_50667957_50668072_50670519_50670666_50672531_50672708_50675429_50675564_50676374_50676499_50677412_50677494_50678015_50678183_50679481_50679642_50682629_50682763_50683472_50683681_50686144_50686275_50687265
ES.4745.3	chr11	+	4571	20	NNC	ENSMUSG00000036545.10	novel	368	3	NA	NA	65452	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.0989796325169	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTTTGCTCGGCTGG	NA	False	NA	NA	False	AATAAA	-30	NA	50558362	50689173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50558466_50558817_50558978_50627992_50628196_50647522_50647607_50664043_50664201_50666140_50666247_50666945_50667090_50667448_50667582_50667957_50668072_50670519_50670666_50672531_50672708_50675429_50675564_50676374_50676499_50677412_50677494_50678015_50678183_50679481_50679642_50682629_50682763_50683472_50683681_50686144_50686275_50687265
ES.4746.1	chr11	+	180	1	Intergenic	novelGene_3678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	50690592	50690772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50690600_50690800
ES.4747.1	chr11	-	5834	1	Genic_Genomic	ENSMUSG00000044807.14	novel	NA	NA	NA	NA	10061	522	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTCAAGAAGTGATTTG	NA	False	NA	NA	False	NA	NA	NA	50707224	50701390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_50701400_50707200
ES.4747.10	chr11	-	4013	3	NIC	ENSMUSG00000044807.14	novel	1683	4	NA	NA	-6	461	intron_retention	FALSE	canonical	3	22	junction_2	5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGTGTATGTATGCAT	290	False	NA	NA	False	AATAAA	-31	NA	50718557	50704929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50706821_50707945_50708763_50717252
ES.4747.11	chr11	-	2337	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-31	3019	3	459	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTGTGTGTATGTATGC	299	False	NA	NA	False	AATAAA	-29	NA	50718548	50704931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
ES.4747.2	chr11	-	5398	5	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	-21	9	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	8.46684711093805	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGAATGTGAGCTTTTT	275	False	NA	NA	False	AATAAA	-26	NA	50718572	50701903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718396
ES.4747.3	chr11	-	5362	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	-34	-3	0	3	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGGTGAATGTGAG	296	False	NA	NA	False	AATAAA	-20	NA	50718551	50701909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
ES.4747.4	chr11	-	7099	3	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	-6	3	intron_retention	FALSE	canonical	3	10	junction_2	6	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAGTGGTGAATGTGAG	290	False	NA	NA	False	AATAAA	-20	NA	50718557	50701909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50708763_50717252_50717338_50718396
ES.4747.5	chr11	-	5441	5	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_2	11.5839328382031	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAAGTGGTGAATGTG	297	False	NA	NA	False	AATAAA	-18	NA	50718550	50701911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50706821_50707945_50708121_50708635_50708763_50717252_50717338_50718405
ES.4747.6	chr11	-	5956	4	NIC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	17	junction_3	6.23609564462324	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAAGTGGTGAATGTG	297	False	NA	NA	False	AATAAA	-18	NA	50718550	50701911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50706821_50707945_50708763_50717252_50717338_50718405
ES.4747.7	chr11	-	5454	6	NIC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	11.4786758818254	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAAAGTGGTGAATGT	272	False	NA	NA	False	AATAAA	-17	NA	50718575	50701912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50706821_50707945_50708039_50708115_50708187_50708635_50708763_50717252_50717338_50718405
ES.4747.8	chr11	-	5437	6	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.6	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTATAAAGTGGTGAAT	296	False	NA	NA	False	AATAAA	-15	NA	50718551	50701914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50706821_50707945_50708039_50708115_50708187_50708635_50708763_50717252_50717338_50718396
ES.4747.9	chr11	-	5958	4	NNC	ENSMUSG00000044807.14	novel	5325	5	NA	NA	0	-7	intron_retention	FALSE	canonical	3	10	junction_3	8.9938250421547	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGATTTATAAAGTGG	296	False	NA	NA	False	AATAAA	-10	NA	50718551	50701919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50706821_50707945_50708763_50717252_50717338_50718396
ES.4748.1	chr11	-	2069	5	FSM	ENSMUSG00000044296.11	ENSMUST00000049625.2	2408	5	49	290	43	-242	multi-exon	FALSE	canonical	0	0	junction_2	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGTATGTGGATTCTTT	NA	False	NA	NA	False	TATAAA	-45	NA	50732330	50723151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50724799_50728736_50728833_50729236_50729364_50731352_50731418_50732196
ES.4749.1	chr11	+	2414	1	Antisense	novelGene_ENSMUSG00000049321.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTAGTGTCTGGCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50806560	50808974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_50806600_50809000
ES.475.1	chr1	-	7392	28	NIC	ENSMUSG00000052331.15	novel	6140	28	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	2.75322482074753	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTTTTCTTTCATT	NA	False	NA	NA	False	AATAAA	-21	NA	54965535	54684500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54688760_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ES.475.2	chr1	-	7451	28	NIC	ENSMUSG00000052331.15	novel	6192	28	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	2.97774092477656	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAATGTGTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	54965545	54684505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_54688760_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774273_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ES.475.3	chr1	-	6278	28	FSM	ENSMUSG00000052331.15	ENSMUST00000179030.8	6140	28	-146	8	-146	-6	multi-exon	FALSE	canonical	1	2	junction_15	2.70395737013985	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAATGTGTGTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	54965692	54684506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_54687495_54690827_54690920_54692901_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ES.475.4	chr1	-	3073	25	ISM	ENSMUSG00000052331.15	ENSMUST00000179030.8	6140	28	65	9571	32	0	5prime_fragment	FALSE	canonical	1	2	junction_12	2.70673029481862	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATATTGAAAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	54965481	54694069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ES.475.5	chr1	-	234	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAGTTGGCAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	54926537	54926303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_54926300_54926500
ES.475.6	chr1	-	203	2	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTTGTTTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	54987453	54926333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_54926487_54987403
ES.475.7	chr1	-	179	2	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54987452	54926359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_54926518_54987431
ES.475.8	chr1	-	177	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAACATT	NA	False	NA	NA	False	NA	NA	NA	54987457	54987280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_54987300_54987500
ES.4750.1	chr11	-	2232	6	FSM	ENSMUSG00000048728.16	ENSMUST00000163301.8	2090	6	-141	-1	9	1	multi-exon	FALSE	canonical	3	11	junction_3	3.42928563989645	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCTTTTTTTA	NA	False	NA	0	True	ATTAAA	-27	NA	50778469	50763545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50778219
ES.4750.11	chr11	-	3092	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806996	50789538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ES.4750.12	chr11	-	7901	5	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	36	junction_4	17.9356488591854	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50807004	50789538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
ES.4750.14	chr11	-	3188	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5458220512462	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806987	50789538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803253_50806935
ES.4750.15	chr11	-	3167	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6887462097269	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50806988	50789539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
ES.4750.16	chr11	-	3084	6	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	32.7878026101171	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50807005	50789539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796912_50796985_50801262_50801353_50801576_50801704_50803106_50803253_50806935
ES.4750.19	chr11	-	3124	7	FSM	ENSMUSG00000049321.18	ENSMUST00000109128.8	2782	7	4	-346	4	-1	multi-exon	TRUE	canonical	0	0	junction_1	30.6630432642003	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGGTAT	NA	False	NA	-1	True	NA	NA	NA	50806988	50789539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50792119_50796432_50796514_50796912_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
ES.4750.2	chr11	-	2115	6	NNC	ENSMUSG00000048728.16	novel	2090	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	5.81721582889959	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTTTCTTTTTTTA	NA	False	NA	0	True	ATTAAA	-27	NA	50778328	50763545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50765115_50768869_50768933_50774010_50774101_50774511_50774639_50777195_50777326_50778192
ES.4750.20	chr11	-	3128	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	27.5637443029789	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	50807010	50789540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803253_50806935
ES.4750.21	chr11	-	2621	2	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	50806978	50789540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50792119_50806935
ES.4750.23	chr11	-	9455	3	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	29	junction_2	23.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	50806980	50789540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796985_50801262_50803229_50806935
ES.4750.25	chr11	-	2903	5	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	25.8505319094211	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTTGCCTTGGTCATGG	NA	False	NA	-4	True	NA	NA	NA	50806982	50789542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50803106_50803229_50806935
ES.4750.27	chr11	-	7150	6	NIC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	-2	5	intron_retention	FALSE	canonical	0	0	junction_3	32.7010703188749	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTGGACAGTATTATG	NA	False	NA	NA	False	AATACA	-18	NA	50806994	50789880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796514_50796912_50796985_50801262_50801356_50801532_50801704_50803106_50803229_50806935
ES.4750.28	chr11	-	2724	6	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	-1592	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.6859590355097	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGCTGGACAGTATT	NA	False	NA	NA	False	AATACA	-15	NA	50803229	50789883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801576_50801704_50803106
ES.4750.29	chr11	-	2654	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-12	-99	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGACTTAAATATAATC	NA	False	NA	NA	False	AATAAA	-20	NA	50807004	50789984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ES.4750.30	chr11	-	2606	6	NNC	ENSMUSG00000049321.18	novel	539	5	NA	NA	-2	-99	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	26.3241334140366	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGACTTAAATATAATC	NA	False	NA	NA	False	AATAAA	-20	NA	50806994	50789984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801356_50801576_50801704_50803106_50803232_50806935
ES.4750.31	chr11	-	6809	4	NNC	ENSMUSG00000049321.18	novel	539	5	NA	NA	-70	-111	intron_retention	FALSE	canonical	2	6	junction_3	30.7354301526214	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAGATGACAATGTGAC	NA	False	NA	NA	False	AATAAA	-8	NA	50801707	50789996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50796514_50796916_50796985_50801262_50801356_50801576
ES.4750.32	chr11	-	2192	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	4	-626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.0203299211285	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATGTGAAAGTGGAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	50806988	50790511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ES.4750.33	chr11	-	1401	6	NNC	ENSMUSG00000049321.18	novel	1407	5	NA	NA	5	392	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	22.7279563533548	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAATTGTAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	50806987	50795618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
ES.4750.34	chr11	-	561	5	NIC	ENSMUSG00000049321.18	novel	539	5	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	24.8394846967484	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTTCTTTAATGGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	50806987	50796817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
ES.4750.35	chr11	-	6041	1	NIC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	-1222	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTTCTTTAATGGTG	NA	False	NA	NA	False	AATAAA	-16	NA	50802859	50796818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796800_50802900
ES.4750.4	chr11	-	2477	10	Fusion	ENSMUSG00000048728.16_ENSMUSG00000049321.18	novel	2059	6	NA	NA	-1	0	multi-exon	FALSE	canonical	0	0	junction_5	26.0787032927655	102	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTTGTTTCTTTTTTT	NA	False	NA	-1	True	ATTAAA	-26	NA	50806980	50763546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ES.4750.5	chr11	-	4565	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	5	1445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0784379834192	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAACTGTGTCGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	50806987	50788093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
ES.4750.6	chr11	-	9282	5	NIC	ENSMUSG00000049321.18	novel	539	5	NA	NA	-6	1444	intron_retention	FALSE	canonical	3	18	junction_2	24.8394846967484	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAACTGTGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	50806985	50788094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_50796985_50801262_50801353_50801576_50801704_50803106_50803232_50806935
ES.4750.7	chr11	-	4514	6	NNC	ENSMUSG00000049321.18	novel	1407	5	NA	NA	1	1444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.1822639260937	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTAACTGTGTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	50806968	50788094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801356_50801532_50801704_50803106_50803232_50806935
ES.4750.8	chr11	-	3740	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	3	655	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	19.4668949758301	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAGGAGCCCAGAGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	50806989	50788883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ES.4750.9	chr11	-	3042	6	NNC	ENSMUSG00000049321.18	novel	3069	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	26.9859222558726	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806987	50789538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50792119_50796916_50796985_50801262_50801356_50801576_50801704_50803106_50803229_50806935
ES.4751.1	chr11	-	2507	5	NNC	ENSMUSG00000020335.14	novel	2455	5	NA	NA	-1	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.12132034355964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAAAGAAAGAGAACT	5250	False	NA	NA	False	NA	NA	NA	50822461	50812626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_50814668_50819390_50819515_50820203_50820331_50821727_50821813_50822331
ES.4751.2	chr11	-	2439	5	FSM	ENSMUSG00000020335.14	ENSMUST00000109124.10	2455	5	8	8	8	-8	multi-exon	FALSE	canonical	0	0	junction_1	1.78535710713571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTACTGTCAAACTGCA	5259	False	NA	NA	False	NA	NA	NA	50822452	50812657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_50814668_50819390_50819487_50820203_50820331_50821727_50821813_50822331
ES.4751.3	chr11	-	1923	3	ISM	ENSMUSG00000020335.14	ENSMUST00000164280.2	1806	4	-33	4639	-33	1634	5prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	5918	False	NA	NA	False	NA	NA	NA	50821793	50817756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_50819487_50820203_50820331_50821727
ES.4752.1	chr11	+	222	1	Intergenic	novelGene_3679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAAACAGATGCATGAA	NA	False	NA	NA	False	NA	NA	NA	50824763	50824985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_50824800_50825000
ES.4753.1	chr11	-	175	1	Intergenic	novelGene_3680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAAATCTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	50830604	50830429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_50830400_50830600
ES.4754.1	chr11	+	2636	5	FSM	ENSMUSG00000020364.15	ENSMUST00000109122.8	4165	5	-10	1539	-10	-102	multi-exon	FALSE	canonical	1	1	junction_2	2.77263412660235	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTCTCTGGAACATCTC	NA	False	NA	NA	False	AATAAA	-28	NA	50950110	50962087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50950230_50950612_50950869_50951686_50951814_50952229_50952326_50960049
ES.4754.2	chr11	+	3282	4	NNC	ENSMUSG00000020364.15	novel	2592	5	NA	NA	-9	-107	intron_retention	FALSE	canonical	1	1	junction_1	2.82842712474619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTAAGTCTCTGGAAC	NA	False	NA	NA	False	AATAAA	-23	NA	50950111	50962082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_50950230_50950778_50951814_50952229_50952326_50960049
ES.4754.3	chr11	+	2549	5	FSM	ENSMUSG00000020364.15	ENSMUST00000102766.10	2592	5	31	12	-6	-12	multi-exon	FALSE	canonical	2	7	junction_3	1.29903810567666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGAATTGGAGATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	50950114	50962177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50950230_50950898_50950982_50951686_50951814_50952229_50952326_50960049
ES.4754.4	chr11	+	2657	5	FSM	ENSMUSG00000020364.15	ENSMUST00000102766.10	2592	5	37	-102	0	102	multi-exon	FALSE	canonical	2	7	junction_3	1.29903810567666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTCGTCGAGGTT	NA	False	NA	NA	False	ACTAAA	-15	NA	50950120	50962291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_50950230_50950898_50950982_50951686_50951814_50952229_50952326_50960049
ES.4755.1	chr11	-	1868	6	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-26	55141	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	9.8508882848198	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAGATTTATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	51111271	51025518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51026043_51077320_51077852_51080756_51081139_51089402_51089544_51104871_51105085_51111194
ES.4755.10	chr11	-	4264	5	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	3	6212	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8.92678553567856	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	51111242	51074447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51077973_51080756_51081139_51104871_51105085_51110284_51110381_51111194
ES.4755.11	chr11	-	3765	2	NNC	ENSMUSG00000086646.8	novel	413	4	NA	NA	29234	6210	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGCATTTGGTCGTG	NA	False	NA	NA	False	NA	NA	NA	51081119	51074449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51077852_51080756
ES.4755.12	chr11	-	1814	5	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	8	901	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	7.3143694191639	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTCTATCTATGTCAT	NA	False	NA	NA	False	TATAAA	-2	NA	51111237	51079758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51081139_51089402_51089544_51104871_51105042_51110284_51110381_51111210
ES.4755.13	chr11	-	795	4	NIC	ENSMUSG00000086646.8	novel	937	5	NA	NA	4	3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	9.0921211313239	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGATTCTGTATGTGTG	NA	False	NA	NA	False	NA	NA	NA	51111241	51080656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51081139_51104871_51105042_51110284_51110381_51111194
ES.4755.14	chr11	-	1428	2	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-15	-23555	intron_retention	FALSE	canonical	2	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCACCTGGATTCTAT	NA	False	NA	NA	False	NA	NA	NA	51111260	51104632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51105085_51110284
ES.4755.2	chr11	-	8077	9	Fusion	ENSMUSG00000086646.8_ENSMUSG00000081296.2	novel	937	5	NA	NA	-25	1204	multi-exon	TRUE	canonical	0	0	junction_1	7.95200446428446	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGCAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	51111270	51064847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_51071475_51072149_51072450_51077872_51077973_51080756_51081139_51083210_51083353_51089402_51089544_51104871_51105085_51110284_51110381_51111194
ES.4755.3	chr11	-	1414	8	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-28	15812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.2189427792243	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGCAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	51111273	51064847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51065022_51067205_51067494_51069209_51069293_51080756_51081139_51083210_51083353_51104871_51105042_51110284_51110381_51111194
ES.4755.4	chr11	-	7498	6	Fusion	ENSMUSG00000086646.8_ENSMUSG00000081296.2	novel	937	5	NA	NA	5	1204	multi-exon	FALSE	canonical	0	0	junction_1	9.17387595294377	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGCAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	51111240	51064847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_51071475_51072272_51072450_51080756_51081139_51104871_51105042_51110284_51110381_51111194
ES.4755.5	chr11	-	3392	6	Fusion	ENSMUSG00000086646.8_ENSMUSG00000081296.2	novel	937	5	NA	NA	2	1203	multi-exon	FALSE	canonical	0	0	junction_1	11.034491379307	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGTTGCAGTTTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	51111243	51064848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_51067490_51069209_51069293_51080756_51081139_51089402_51089544_51110284_51110381_51111194
ES.4755.6	chr11	-	5061	4	Fusion	ENSMUSG00000086646.8_ENSMUSG00000081296.2	novel	937	5	NA	NA	3	1201	multi-exon	FALSE	canonical	0	0	junction_1	10.3387082795139	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGCTTGTTGCAGTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	51111242	51064850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_51069386_51080756_51081139_51110284_51110381_51111194
ES.4755.7	chr11	-	2859	1	Intergenic	novelGene_3681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTATTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	51076827	51073968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51074000_51076800
ES.4755.8	chr11	-	4356	6	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-17	6214	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.55248303539968	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATTTGGTCGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	51111262	51074445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51077973_51080756_51081139_51083210_51083353_51089402_51089544_51110284_51110381_51111194
ES.4755.9	chr11	-	4389	6	NNC	ENSMUSG00000086646.8	novel	937	5	NA	NA	-24	6212	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.60232526704263	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCATTTGGTCGTGGT	NA	False	NA	NA	False	NA	NA	NA	51111269	51074447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51077973_51080756_51081139_51089402_51089544_51104871_51105042_51110284_51110381_51111194
ES.4756.1	chr11	+	2401	6	NNC	ENSMUSG00000061469.4	novel	1462	6	NA	NA	59	1001	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.85149553533112	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCCAGGCCTGGAATCC	NA	False	NA	NA	False	ATTAAA	-10	NA	51111358	51126881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51111470_51122621_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
ES.4756.2	chr11	+	4188	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	64	-2790	64	2790	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCGCTTCAAACCTCTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	51111363	51128670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
ES.4756.3	chr11	+	1827	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	68	-433	68	433	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCGTATTGTCGCAGAC	NA	False	NA	NA	False	AAGAAA	-28	NA	51111367	51126313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
ES.4756.4	chr11	+	4620	2	NNC	ENSMUSG00000061469.4	novel	1462	6	NA	NA	68	-8554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTGGTTTTGCAAC	NA	False	NA	NA	False	AATAAA	-17	NA	51111367	51117181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51111470_51112663
ES.4756.6	chr11	+	6396	1	NIC	ENSMUSG00000061469.4	novel	1462	6	NA	NA	70	-7970	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51111369	51117765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51111400_51117800
ES.4756.7	chr11	+	5966	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	83	-4587	83	4587	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTTCTTGTGATGTGG	NA	False	NA	NA	False	NA	NA	NA	51111382	51130467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
ES.4756.8	chr11	+	2955	6	NNC	ENSMUSG00000061469.4	novel	1462	6	NA	NA	102	1599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.07106781186548	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTAACTTGCCTTGT	NA	False	NA	NA	False	NA	NA	NA	51111401	51127479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51111470_51122618_51122914_51123237_51123435_51124291_51124380_51124877_51125184_51125478
ES.4757.1	chr11	+	4289	1	Intergenic	novelGene_3683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTTGGTAAATGGTT	NA	False	NA	NA	False	NA	NA	NA	51131365	51135654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51131400_51135700
ES.4758.1	chr11	-	2350	1	Intergenic	novelGene_3682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACAGAATGATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	51131563	51129213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51129200_51131600
ES.4759.1	chr11	+	3634	1	Intergenic	novelGene_3684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCATTATCATGCAACA	NA	False	NA	NA	False	AATAAA	-10	NA	51137712	51141346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51137700_51141300
ES.476.1	chr1	+	3774	2	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTTATGCAGTAACAAA	2588	False	NA	NA	False	AAGAAA	-41	NA	55030186	55034864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55033620_55034523
ES.476.2	chr1	+	177	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATACTGCTAAGT	6436	False	NA	NA	False	NA	NA	NA	55034034	55034211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55034000_55034200
ES.4760.1	chr11	-	614	2	ISM	ENSMUSG00000045942.14	ENSMUST00000231433.2	855	4	1694	-142	1694	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTCCTGCCTCATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	51145397	51144477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51144880_51145185
ES.4761.1	chr11	+	5533	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-34	4	intron_retention	FALSE	canonical	3	16	junction_2	45.0975068486822	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153906	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.10	chr11	+	6296	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	4	intron_retention	FALSE	canonical	3	87	junction_2	28.0536985083964	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153976	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.11	chr11	+	7182	10	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16	junction_2	47.2181697607558	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCACTTTGTGATTGAGT	NA	False	NA	10	True	AGTAAA	-10	NA	51153976	51172588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51164454_51166037_51166155_51166238_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.12	chr11	+	3482	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	9	junction_3	55.0845310005954	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACTTTGTGATTGAGTA	NA	False	NA	11	True	AGTAAA	-11	NA	51153977	51172589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.13	chr11	+	8020	9	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	1	intron_retention	FALSE	canonical	3	128	junction_1	21.4636320318813	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGATTGAGTATTCTT	NA	False	NA	16	True	AGTAAA	-16	NA	51153977	51172594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51164454_51166037_51166155_51166238_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.14	chr11	+	1590	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-231	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTGTATGTTTTGTA	NA	False	NA	12	True	ATTAAA	-21	NA	51153977	51172360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.15	chr11	+	5174	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	-1	intron_retention	FALSE	canonical	3	35	junction_3	46.8517164395642	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51153978	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.16	chr11	+	3810	15	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	3	4	intron_retention	FALSE	canonical	2	3	junction_3	59.2192829185541	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153979	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.17	chr11	+	4941	10	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-6	2	intron_retention	FALSE	canonical	3	62	junction_2	35.0681875462331	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTGAGTATTCTTT	NA	False	NA	17	True	AGTAAA	-17	NA	51153982	51172595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51162626_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.18	chr11	+	3175	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-230	intron_retention	FALSE	canonical	3	44	junction_2	39.5929704087117	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTGTATGTTTTGTAT	NA	False	NA	13	True	ATTAAA	-22	NA	51153989	51172361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.19	chr11	+	5532	13	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_9	61.444362818913	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGACCACTTTGTGATT	NA	False	NA	6	True	AGTAAA	-6	NA	51153989	51172584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51157997_51158159_51158991_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167079_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.2	chr11	+	1959	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	-4	-6	-4	4	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153936	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.20	chr11	+	6609	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_2	29.2679005055026	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153990	51172591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.21	chr11	+	3348	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	3	intron_retention	FALSE	canonical	3	62	junction_2	33.4628151834241	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATTGAGTATTCTTTA	NA	False	NA	18	True	AGTAAA	-18	NA	51153992	51172596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.22	chr11	+	6887	9	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	4	intron_retention	FALSE	canonical	3	81	junction_2	31.5069436791321	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153993	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51161423_51162626_51164454_51166037_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.23	chr11	+	5069	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	0	intron_retention	FALSE	canonical	3	81	junction_2	32.0314927676751	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153993	51172591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.24	chr11	+	4837	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	-227	intron_retention	FALSE	canonical	3	81	junction_2	32.0314927676751	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTATGTTTTGTATCAA	NA	False	NA	16	True	ATTAAA	-25	NA	51153998	51172364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.25	chr11	+	7159	12	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	57.1377919833036	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51153998	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51157997_51158159_51158991_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51168430_51168642_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.26	chr11	+	6715	12	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-1	4	intron_retention	FALSE	canonical	0	0	junction_1	61.0519356202177	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153999	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51154493_51154603_51157997_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.27	chr11	+	2091	16	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	62.8255432836747	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51154001	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51159674_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.28	chr11	+	2002	15	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	60.1503643092094	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154002	51172593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51159674_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.29	chr11	+	1320	4	NIC	ENSMUSG00000020385.17	novel	742	7	NA	NA	2	441	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	34.3737626039914	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACAATTGTGTTGTT	NA	False	NA	NA	False	ATTAAA	-11	NA	51154002	51163632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626
ES.4761.3	chr11	+	3448	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	7	1	intron_retention	FALSE	canonical	3	44	junction_2	39.5929704087117	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGTGATTGAGTATTC	NA	False	NA	14	True	AGTAAA	-14	NA	51153947	51172592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.30	chr11	+	1946	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154004	51172593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.31	chr11	+	1880	13	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.0631839751605	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51154012	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51157997_51158159_51158963_51159059_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.32	chr11	+	4422	15	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_1	64.9274320189196	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51154013	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51154493_51154603_51157997_51158159_51158991_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.33	chr11	+	4108	11	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	5	intron_retention	FALSE	canonical	3	35	junction_4	50.9789172109412	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTGAGTATTCTTTATA	NA	False	NA	20	True	AGTAAA	-20	NA	51154013	51172598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51166155_51166238_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.34	chr11	+	6417	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-3	intron_retention	FALSE	canonical	2	3	junction_3	57.3249401249629	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCACTTTGTGATTGAGT	NA	False	NA	10	True	AGTAAA	-10	NA	51154013	51172588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.35	chr11	+	2001	15	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	58.4743533525596	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51154013	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.36	chr11	+	4309	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	16	junction_2	53.4988801519695	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154013	51172593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.37	chr11	+	5755	12	NNC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	59.088951016509	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51154013	51172591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51154097_51157995_51158159_51158991_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.38	chr11	+	6443	8	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_5	57.8121518191391	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51154015	51172591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51162850_51164386_51164454_51166037_51166692_51166944_51167075_51171184_51171265_51171935_51172027_51172103
ES.4761.39	chr11	+	1689	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	3	-153	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGAATTTTCCTTTTGA	NA	False	NA	90	True	AATACA	-7	NA	51154015	51172438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.4	chr11	+	1853	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	11	4	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGAGTATTCTTTAT	NA	False	NA	19	True	AGTAAA	-19	NA	51153951	51172597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.40	chr11	+	1680	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	4129	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	55.7600887732435	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCACTTTGTGATTGAG	NA	False	NA	9	True	AGTAAA	-9	NA	51158141	51172587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51158159_51158991_51159059_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.41	chr11	+	6814	9	FSM	ENSMUSG00002076304.1_ENSMUSG00000020385.17	ENSMUST00000109111.2	1427	9	-5388	1	-2372	-1	multi-exon	FALSE	canonical	3	122	junction_3	22.366269246345	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51158889	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.42	chr11	+	2664	1	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	243	605	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGGCTATAACTTGCC	NA	False	NA	NA	False	AATAAA	-1	NA	51165977	51168641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51166000_51168600
ES.4761.43	chr11	+	2061	1	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-641	-236	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAAATACTGTATGTT	NA	False	NA	7	True	ATTAAA	-16	NA	51170294	51172355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51170300_51172400
ES.4761.5	chr11	+	1704	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	14	231	14	-231	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTGTATGTTTTGTA	NA	False	NA	12	True	ATTAAA	-21	NA	51153954	51172360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.6	chr11	+	4262	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	16	junction_2	45.3198509363048	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	False	NA	12	True	AGTAAA	-12	NA	51153966	51172590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.7	chr11	+	1892	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51153967	51172593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.8	chr11	+	3556	10	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	62	junction_2	34.7139990262583	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCACTTTGTGATTGAGT	NA	False	NA	10	True	AGTAAA	-10	NA	51153967	51172588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51162626_51164454_51166037_51166155_51166238_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4761.9	chr11	+	3571	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	-4	2	intron_retention	FALSE	canonical	2	3	junction_3	62.0968893636312	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATTGAGTATTCTTT	NA	False	NA	17	True	AGTAAA	-17	NA	51153972	51172595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51159595_51159674_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ES.4762.1	chr11	-	759	3	Antisense	novelGene_ENSMUSG00000063564.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATGATATTGAACAGAT	NA	False	NA	NA	False	NA	NA	NA	51327733	51321716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_51322340_51322537_51322596_51327655
ES.4763.1	chr11	+	1617	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	8	1491	8	-256	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGACATACTCCCATT	NA	False	NA	NA	False	TTTAAA	-4	NA	51475591	51493825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ES.4763.2	chr11	+	1865	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	24	1227	-8	8	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCTAAGACCCATCAGC	NA	False	NA	NA	False	ATTAAA	-23	NA	51475607	51494089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ES.4763.3	chr11	+	3705	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	30	-619	-2	619	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAACAACAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	51475613	51495935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ES.4763.5	chr11	+	3091	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	34	-9	2	9	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATCTATTGGAAGCT	NA	False	NA	NA	False	AATAAA	-25	NA	51475617	51495325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ES.4763.6	chr11	+	6453	10	NIC	ENSMUSG00000020359.14	novel	2225	13	NA	NA	3	-2	intron_retention	FALSE	canonical	3	19	junction_6	5.49298093080368	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATTTGGTACATAATT	NA	False	NA	NA	False	CATAAA	-11	NA	51475618	51492153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51489258_51489477_51489568_51490292_51490424_51491395
ES.4763.7	chr11	+	5571	2	NNC	ENSMUSG00000020359.14	novel	510	4	NA	NA	2193	619	intron_retention	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAACAACAAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	51484466	51495935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51485406_51491303
ES.4764.1	chr11	+	162	1	Intergenic	novelGene_3685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAAATGGGGGG	NA	False	NA	NA	False	NA	NA	NA	51501004	51501166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51501000_51501200
ES.4765.1	chr11	+	140	1	Intergenic	novelGene_3686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	51507174	51507314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51507200_51507300
ES.4766.1	chr11	+	825	5	NNC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	-485	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2326.37668918858	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGGTGTTCTTGA	NA	False	NA	26	True	AGTAAA	-21	NA	51510076	51514266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51510131_51510557_51510805_51510908_51510979_51513311_51513418_51513918
ES.4766.10	chr11	+	623	4	NNC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	95	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2516.18445711403	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510692	51514264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51510805_51510908_51510979_51513322_51513418_51513918
ES.4766.11	chr11	+	5950	1	Antisense	novelGene_ENSMUSG00000001054.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAAGGACAGGGTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	51514639	51520589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51514600_51520600
ES.4766.12	chr11	+	4764	1	Antisense	novelGene_ENSMUSG00000001054.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTCACGTGGTCCCCGG	NA	False	NA	NA	False	NA	NA	NA	51515504	51520268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51515500_51520300
ES.4766.2	chr11	+	868	3	FSM	ENSMUSG00000001056.4	ENSMUST00000001083.4	825	3	-35	-8	1	8	multi-exon	FALSE	canonical	3	5400	junction_2	19.5	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510562	51514264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51510979_51513311_51513418_51513918
ES.4766.3	chr11	+	950	1	NIC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	10	-2735	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	575	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAAAGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	51510571	51511521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51510600_51511500
ES.4766.4	chr11	+	2391	5	NNC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	-5	6265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2326.37668918858	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTCGCTGTTATCTTT	NA	False	NA	NA	False	AAAAAG	-27	NA	51510592	51520806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918_51514484_51519368
ES.4766.5	chr11	+	7124	4	NNC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	-3	6055	intron_retention	FALSE	non_canonical	0	0	junction_3	2554.82641288992	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGGGTTGTTTTGTATT	NA	False	NA	NA	False	AATAAA	-21	NA	51510594	51520596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51510979_51513311_51513418_51513918_51517024_51517067
ES.4766.6	chr11	+	1231	3	ISM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	35	277	-1	8	intron_retention	FALSE	canonical	3	5273	junction_1	83	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTGTGTGGGTGTTCTT	NA	False	NA	24	True	AGTAAA	-19	NA	51510596	51514264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51510805_51510908_51510979_51513311
ES.4766.7	chr11	+	3055	3	NIC	ENSMUSG00000001056.4	novel	1042	4	NA	NA	3	4	intron_retention	FALSE	canonical	3	5273	junction_1	63.5	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCAAGTGTGTGGGTGT	NA	False	NA	20	True	AGTAAA	-15	NA	51510600	51514260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51510805_51510908_51513418_51513918
ES.4766.8	chr11	+	997	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	40	5	4	-5	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGCATTCAGTTCTAA	NA	False	NA	NA	False	AATATA	-16	NA	51510601	51514536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ES.4766.9	chr11	+	2234	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	55	-1247	19	1247	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCCTGTGGAAAGCC	NA	False	NA	NA	False	AGTAAA	-15	NA	51510616	51515788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ES.4767.1	chr11	-	2731	2	Antisense	novelGene_ENSMUSG00000020359.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	67	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTATTTTATATGT	NA	False	NA	NA	False	NA	NA	NA	51487719	51479517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_51480210_51485680
ES.4767.10	chr11	-	5545	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	0	-3175	0	3175	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTACCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	51497674	51487751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.11	chr11	-	5409	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-45	-2994	-45	2994	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAGTGCCCTGAAGTTA	NA	False	NA	NA	False	TATAAA	-23	NA	51497719	51487932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.12	chr11	-	5492	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	6	-4061	6	2987	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGATGTTCAGTGCCCT	NA	False	NA	NA	False	TATAAA	-16	NA	51497668	51487939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.13	chr11	-	3633	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-33	-1230	-33	1230	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTTCATGGTTGGAG	NA	False	NA	0	True	AATAAA	-27	NA	51497707	51489696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.14	chr11	-	3760	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-19	-2304	-19	1230	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTTCATGGTTGGAG	NA	False	NA	0	True	AATAAA	-27	NA	51497693	51489696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.16	chr11	-	3391	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	2	-1956	2	882	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGACAGTTTTTAAGTT	NA	False	NA	-12	True	NA	NA	NA	51497672	51490044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.17	chr11	-	3249	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2	-881	2	881	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATGACAGTTTTTAAGT	NA	False	NA	-13	True	NA	NA	NA	51497672	51490045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.19	chr11	-	2971	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2	-603	2	603	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTCAGTAAAATGTAGT	NA	False	NA	NA	False	GGGGCT	-32	NA	51497672	51490323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.2	chr11	-	6191	2	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	4211	4769	intron_retention	FALSE	canonical	2	3	junction_1	0	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACCAAGTACCCAGCT	NA	False	NA	NA	False	AATAAA	-19	NA	51493463	51486157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492301_51493415
ES.4767.20	chr11	-	2522	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-29	-123	-29	123	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACAGTTTCTTTTGGTTT	NA	False	NA	-5	True	GATAAA	-16	NA	51497703	51490803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.21	chr11	-	2470	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-89	-11	-89	11	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAGTGATTTAAAGGT	NA	False	NA	0	True	AATAAA	-27	NA	51497763	51490915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.22	chr11	-	2561	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-39	-1085	-39	11	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAGTGATTTAAAGGT	NA	False	NA	0	True	AATAAA	-27	NA	51497713	51490915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.28	chr11	-	2280	8	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	1091.81234838301	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	False	NA	-11	True	AATAAA	-16	NA	51497672	51490926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497245_51497332_51497414_51497493
ES.4767.3	chr11	-	6430	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	5	-4998	5	3924	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGCTTCACAATCTGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	51497669	51487002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.30	chr11	-	2358	7	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_3	1147.02883088826	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTTCTTGACCTTGAG	NA	False	NA	-12	True	AATAAA	-15	NA	51497663	51490927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51493419_51493523_51495226_51495353_51495479_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.31	chr11	-	2242	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	3	-808	3	-266	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTGGCTTATGTCTCA	NA	False	NA	NA	False	NA	NA	NA	51497671	51491192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.32	chr11	-	2102	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2	266	2	-266	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTGGCTTATGTCTCA	NA	False	NA	NA	False	NA	NA	NA	51497672	51491192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.33	chr11	-	1900	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	5	465	5	304	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATCACAGATCGTTT	NA	False	NA	NA	False	NA	NA	NA	51497669	51491391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.34	chr11	-	1684	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-67	753	-67	16	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCTGTGAGACCTTGC	NA	False	NA	-1	True	AATAAA	-38	NA	51497741	51491679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.36	chr11	-	1786	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-46	-303	-46	-2	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGGGTAAATGTGGGA	NA	False	NA	-19	True	AATAAA	-20	NA	51497720	51491697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.4	chr11	-	1382	8	NNC	ENSMUSG00000020358.18	novel	2013	7	NA	NA	2	3922	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1116.13681408468	1433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATGCTTCACAATCTG	NA	False	NA	NA	False	ATTAAA	-11	NA	51497672	51487004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51487257_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.42	chr11	-	1720	6	NIC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	-20	-28	intron_retention	FALSE	canonical	3	2171	junction_1	418.811365652844	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATGAAAAACAAA	NA	False	NA	-45	True	NA	NA	NA	51497694	51491723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51492306_51493419_51493523_51495226_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.43	chr11	-	3413	7	NIC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	5	-28	intron_retention	FALSE	canonical	3	1798	junction_2	616.35525920978	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATGAAAAACAAA	NA	False	NA	-45	True	NA	NA	NA	51497669	51491723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51492306_51492576_51492718_51493419_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.47	chr11	-	2686	6	NNC	ENSMUSG00000020358.18	novel	2013	7	NA	NA	-2	-28	intron_retention	FALSE	canonical	3	84	junction_5	1243.74296379919	1417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATGAAAAACAAA	NA	False	NA	-45	True	NA	NA	NA	51497676	51491723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497411_51497493
ES.4767.5	chr11	-	5963	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-67	-3526	-67	3526	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGGTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	51497741	51487400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.52	chr11	-	1463	7	NIC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	4	-28	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	1161.63505456748	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATGAAAAACAAA	NA	False	NA	-45	True	NA	NA	NA	51497670	51491723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497493
ES.4767.56	chr11	-	1717	8	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	-11	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1091.56375378236	1417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAATAAAAATGAAAAACA	NA	False	NA	-47	True	NA	NA	NA	51497685	51491725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495353_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.57	chr11	-	1640	8	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	1	-98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1105.10909979467	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGTAAGGTATTTTACA	NA	False	NA	81	True	NA	NA	NA	51497673	51491793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51492576_51492711_51493415_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.58	chr11	-	1583	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-43	-103	-43	103	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTTTTTCACCTTTT	NA	False	NA	-23	True	AGTAAA	-21	NA	51497717	51491897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.6	chr11	-	5839	5	ISM	ENSMUSG00000020358.18	ENSMUST00000101249.9	2013	7	1232	-4268	1232	3499	3prime_fragment	FALSE	canonical	3	1798	junction_1	620.117327608252	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAGATGATTGA	NA	False	NA	NA	False	NA	NA	NA	51496442	51487427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287
ES.4767.60	chr11	-	1539	8	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	2	96	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1121.8171119452	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTGTCACCTTTTTC	NA	False	NA	-30	True	AGTAAA	-14	NA	51497672	51491904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497485
ES.4767.61	chr11	-	1040	6	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	841	96	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1244.61859217995	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTGTCACCTTTTTC	NA	False	NA	-30	True	AGTAAA	-14	NA	51496833	51491904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51496757
ES.4767.64	chr11	-	1425	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-33	978	-33	96	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGTGTCACCTTTTTC	NA	False	NA	-30	True	AGTAAA	-14	NA	51497707	51491904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.66	chr11	-	1267	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	-65	1168	-65	-94	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCCTGTTTACTATTCC	NA	False	NA	-2	True	TTTAAA	-17	NA	51497739	51492094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.67	chr11	-	1381	9	NNC	ENSMUSG00000020358.18	novel	1437	8	NA	NA	-12629	-98	at_least_one_novel_splicesite	FALSE	canonical	3	375	junction_8	954.45114300052	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTCTCCTGTTTACTA	NA	False	NA	-6	True	TTTAAA	-13	NA	51510303	51492098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493_51497627_51510213
ES.4767.7	chr11	-	5701	6	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	1099	-4573	1099	3499	3prime_fragment	FALSE	canonical	3	1798	junction_2	661.456393120514	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAGATGATTGA	NA	False	NA	NA	False	NA	NA	NA	51496575	51487427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287
ES.4767.73	chr11	-	1369	7	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	8	140	8	-140	intron_retention	FALSE	canonical	3	1798	junction_2	628.220414256723	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCTGTCCCATGTGCAT	NA	False	NA	-19	True	NA	NA	NA	51497666	51492140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166
ES.4767.74	chr11	-	1862	6	NIC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	2	-142	intron_retention	FALSE	canonical	3	2171	junction_1	420.364889114208	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGCCTGTCCCATGTGC	NA	False	NA	-21	True	NA	NA	NA	51497672	51492142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51497414_51497493
ES.4767.76	chr11	-	825	5	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	-33	3322	-33	-3322	5prime_fragment	FALSE	canonical	3	2774	junction_4	226.643442437676	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGACGGGGTTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	51497707	51495322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.77	chr11	-	156	1	Intergenic	novelGene_3687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	51508490	51508334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51508300_51508500
ES.4767.78	chr11	-	91	1	Intergenic	novelGene_3688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51509981	51509890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51509900_51510000
ES.4767.8	chr11	-	5753	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2	-3385	2	3385	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGTAGCATGGTAGTGTA	NA	False	NA	NA	False	NA	NA	NA	51497672	51487541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4767.9	chr11	-	5894	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	0	-4457	0	3383	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGAGTAGCATGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	51497674	51487543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ES.4768.1	chr11	-	3278	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-17	6	intron_retention	FALSE	canonical	3	245	junction_3	13.8924439894498	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATGGTCTTGTGTGTAT	NA	False	NA	-1	True	AATATA	-27	NA	51526597	51514491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51520489_51526416
ES.4768.10	chr11	-	3984	8	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_3	97.8956128762069	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	False	NA	-7	True	AATATA	-21	NA	51526708	51514497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51514974_51515055_51515211_51515301_51517032_51517068_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ES.4768.12	chr11	-	2237	7	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	6	junction_6	100.121592742691	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526582	51514499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51518590_51518706_51518853_51526416
ES.4768.13	chr11	-	5285	5	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	32	0	intron_retention	FALSE	canonical	3	268	junction_2	10.3198837202751	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526442	51514499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51515211_51515301_51517927_51518448_51518590_51518706_51520489_51526416
ES.4768.15	chr11	-	3444	7	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-18	0	intron_retention	FALSE	canonical	3	245	junction_1	15.9312760178071	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526598	51514499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51520489_51526416
ES.4768.16	chr11	-	3887	7	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	268	junction_3	9.3392838174146	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526576	51514499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ES.4768.17	chr11	-	5535	6	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-51	0	intron_retention	FALSE	canonical	3	268	junction_3	9.30806102257608	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526774	51514499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51517927_51518448_51518590_51518706_51520489_51526416
ES.4768.18	chr11	-	1824	8	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	17	-1	intron_retention	FALSE	canonical	3	6	junction_7	93.0797332113381	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAATGATTGCATGGTCT	NA	False	NA	-10	True	AATATA	-18	NA	51526706	51514500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51526416
ES.4768.19	chr11	-	1424	5	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	9	-2265	intron_retention	FALSE	canonical	3	268	junction_1	11.2333209693305	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAATTATAAA	NA	False	NA	NA	False	NA	NA	NA	51526571	51517130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ES.4768.2	chr11	-	4897	5	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-3055	5	intron_retention	FALSE	canonical	0	0	junction_3	121.16595025006	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGGTCTTGTGTGTA	NA	False	NA	-2	True	AATATA	-26	NA	51519716	51514492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51514974_51515055_51515211_51515301_51517028_51517064_51518590_51518706
ES.4768.3	chr11	-	1982	11	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	132	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	108.829269959878	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGGTCTTGTGTGTA	NA	False	NA	-2	True	AATATA	-26	NA	51526342	51514492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51525287_51525571_51526289
ES.4768.4	chr11	-	2032	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	-79	-7	-79	5	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCATGGTCTTGTGTGTA	NA	False	NA	-2	True	AATATA	-26	NA	51526802	51514492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ES.4768.5	chr11	-	4273	8	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	4448	3	intron_retention	FALSE	canonical	3	267	junction_4	6.27596646756823	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCATGGTCTTGTGTG	NA	False	NA	-4	True	AATATA	-24	NA	51522026	51514494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302
ES.4768.6	chr11	-	3024	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	16	1	intron_retention	FALSE	canonical	3	267	junction_4	8.95038406997152	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGCATGGTCTTGTG	NA	False	NA	-6	True	AATATA	-22	NA	51526707	51514496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ES.4768.7	chr11	-	3811	9	ISM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	4066	-3	3817	1	3prime_fragment	FALSE	canonical	3	245	junction_3	11.4065496535981	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGCATGGTCTTGTG	NA	False	NA	-6	True	AATATA	-22	NA	51522657	51514496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302
ES.4768.8	chr11	-	1890	10	NNC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	85.8044000138011	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGCATGGTCTTGTG	NA	False	NA	-6	True	AATATA	-22	NA	51526594	51514496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520559_51526416
ES.4768.9	chr11	-	2322	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	245	junction_3	13.7999094199926	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	False	NA	-7	True	AATATA	-21	NA	51526575	51514497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51518590_51518706_51518853_51520302_51520489_51526416
ES.4769.1	chr11	+	3756	5	NNC	ENSMUSG00000052563.14	novel	3426	4	NA	NA	-852	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.76208734813001	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51540928	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51541050_51541573_51542041_51544560_51544699_51544818_51544941_51545599
ES.4769.2	chr11	+	3697	5	NNC	ENSMUSG00000052563.14	novel	3410	4	NA	NA	-463	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.13941029804985	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541317	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51541399_51541573_51542041_51544560_51544699_51544837_51544941_51545599
ES.4769.3	chr11	+	3814	4	FSM	ENSMUSG00000052563.14	ENSMUST00000117859.8	3410	4	-405	1	-405	0	multi-exon	FALSE	canonical	2	4	junction_2	6.94422221866655	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541375	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51542041_51544560_51544699_51544837_51544941_51545599
ES.4769.4	chr11	+	3596	3	NIC	ENSMUSG00000052563.14	novel	3426	4	NA	NA	-48	0	intron_retention	FALSE	canonical	3	17	junction_1	1.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541732	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51542041_51544560_51544941_51545599
ES.4769.5	chr11	+	4101	3	ISM	ENSMUSG00000052563.14	ENSMUST00000064493.6	3426	4	-16	0	-14	0	intron_retention	FALSE	canonical	3	9	junction_2	4	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541766	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51542041_51544560_51544699_51544818
ES.4769.6	chr11	+	4221	2	ISM	ENSMUSG00000052563.14	ENSMUST00000117859.8	3410	4	-14	1	-14	0	intron_retention	FALSE	canonical	3	17	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541766	51548507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51542041_51544560
ES.477.1	chr1	+	3458	5	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	912	False	NA	NA	False	NA	NA	NA	55035004	55040268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55037419_55038785_55038910_55039171_55039320_55039399_55040073_55040169
ES.477.2	chr1	+	5026	2	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55038910_55039171
ES.477.3	chr1	+	4929	3	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55038910_55039171_55040073_55040169
ES.477.4	chr1	+	5288	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55035000_55040300
ES.477.5	chr1	+	3635	3	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	912	False	NA	NA	False	NA	NA	NA	55035004	55040268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55037419_55038785_55038910_55039171
ES.477.6	chr1	+	4849	4	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55038910_55039171_55039320_55039399_55040073_55040169
ES.477.7	chr1	+	5191	2	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55040073_55040169
ES.477.8	chr1	+	4590	5	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55038910_55039171_55039318_55039398_55039548_55039804_55040073_55040170
ES.477.9	chr1	+	3402	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAATAAATAAATCTG	913	False	NA	NA	False	NA	NA	NA	55035005	55038407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55035000_55038400
ES.4770.1	chr11	-	3800	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-29	-1404	-29	1404	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGATCTCGGTCCAT	NA	False	NA	NA	False	NA	NA	NA	51541698	51532485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ES.4770.10	chr11	-	2343	5	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	391	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	157.872377254541	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGGTCTTATGTGTT	NA	False	NA	-22	True	AATATA	-10	NA	51541256	51533911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541093
ES.4770.11	chr11	-	7014	3	ISM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-29	26	-29	-26	intron_retention	FALSE	canonical	3	359	junction_1	0.5	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541698	51533915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51534976_51535101_51535357_51535999
ES.4770.12	chr11	-	4433	4	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	15	-26	intron_retention	FALSE	canonical	3	4	junction_3	167.584804402627	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTCTCTGGTCTTATG	NA	False	NA	-26	True	AATATA	-6	NA	51541632	51533915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51534976_51535101_51535357_51535999_51538990_51541504
ES.4770.13	chr11	-	2744	4	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-163	-27	intron_retention	FALSE	canonical	3	337	junction_3	10.6144555520604	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAGTCTCTGGTCTTAT	NA	False	NA	-27	True	AATATA	-5	NA	51541832	51533916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51534976_51535101_51535357_51535999_51537102_51541504
ES.4770.14	chr11	-	2400	6	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	1	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.384353047542	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGTCTCTGGTCTTA	NA	False	NA	-28	True	AATATA	-4	NA	51541663	51533917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51538834_51538902_51541504
ES.4770.15	chr11	-	2735	6	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-191	-29	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	177.830706009958	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCAGTCTCTGGTCTT	NA	False	NA	-29	True	AATATA	-3	NA	51541860	51533918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51540975_51541182_51541504
ES.4770.16	chr11	-	5156	4	ISM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	1585	29	1563	-29	3prime_fragment	FALSE	canonical	3	359	junction_1	6.84754619472471	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCAGTCTCTGGTCTT	NA	False	NA	-29	True	AATATA	-3	NA	51540084	51533918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753
ES.4770.17	chr11	-	6664	4	ISM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-42	148	-42	-148	intron_retention	FALSE	canonical	3	359	junction_1	6.84754619472471	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGTTGATAAGATTGT	NA	False	NA	-1	True	AATAAA	-20	NA	51541711	51534037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753
ES.4770.19	chr11	-	2313	6	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-424	-152	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	141.097696650229	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCCTAGTTGATAAGA	NA	False	NA	-5	True	AATAAA	-16	NA	51542093	51534041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504_51541638_51541963
ES.4770.2	chr11	-	3175	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-34	-774	-34	774	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTTCTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	51541703	51533115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ES.4770.20	chr11	-	2442	6	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-21	-152	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	177.830706009958	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCCTAGTTGATAAGA	NA	False	NA	-5	True	AATAAA	-16	NA	51541690	51534041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51540975_51541182_51541504
ES.4770.21	chr11	-	2315	5	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	0	-156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	157.872377254541	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGGCCTAGTTGAT	NA	False	NA	-9	True	AATAAA	-12	NA	51541664	51534045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537211_51541504
ES.4770.3	chr11	-	2832	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-31	-434	-31	434	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTCTCCAAGCTGACCT	NA	False	NA	NA	False	NA	NA	NA	51541700	51533455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ES.4770.4	chr11	-	2917	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	-546	-4	-546	4	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAATGTTATTCCTTG	NA	False	NA	4	True	AATATA	-36	NA	51542215	51533885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ES.4770.5	chr11	-	2561	6	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-42	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_5	175.389167282361	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGGAGGAATGTTA	NA	False	NA	-3	True	AATATA	-29	NA	51541711	51533892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51538834_51538990_51541504
ES.4770.6	chr11	-	2602	6	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-22	-14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	177.830706009958	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATGTGTTTGAAAATG	NA	False	NA	-14	True	AATATA	-18	NA	51541691	51533903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51540954_51541182_51541504
ES.4770.7	chr11	-	2650	5	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-192	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	157.872377254541	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTATGTGTTTGAA	NA	False	NA	-18	True	AATATA	-14	NA	51541861	51533907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537211_51541504
ES.4770.8	chr11	-	2407	6	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-171	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.489372428762	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTCTTATGTGTTTGA	NA	False	NA	-19	True	AATATA	-13	NA	51541840	51533908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534630_51534741_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ES.4770.9	chr11	-	2525	6	NNC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	-504	-20	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	141.097696650229	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGTCTTATGTGTTTG	NA	False	NA	-20	True	AATATA	-12	NA	51542173	51533909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504_51541638_51541963
ES.4771.1	chr11	+	239	1	Intergenic	novelGene_3689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	51553205	51553444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51553200_51553400
ES.4772.1	chr11	-	305	1	Intergenic	novelGene_3690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51555449	51555144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51555100_51555400
ES.4772.2	chr11	-	186	1	Intergenic	novelGene_3691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGAGTGGTGGCGCATG	NA	False	NA	NA	False	NA	NA	NA	51555449	51555263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51555300_51555400
ES.4773.1	chr11	-	4888	1	Intergenic	novelGene_3692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	51560818	51555930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51555900_51560800
ES.4774.1	chr11	-	175	1	Intergenic	novelGene_3693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	51563556	51563381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51563400_51563600
ES.4775.1	chr11	+	182	1	Intergenic	novelGene_3694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACACAA	NA	False	NA	NA	False	NA	NA	NA	51574253	51574435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51574300_51574400
ES.4776.1	chr11	+	2580	1	Antisense	novelGene_ENSMUSG00000007777.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	51574783	51577363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51574800_51577400
ES.4777.1	chr11	+	3921	2	Antisense	novelGene_ENSMUSG00000036391.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAAACTGAAAAACATTC	1818	False	NA	NA	False	AATACA	-43	NA	51579709	51583837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51581370_51581576
ES.4778.1	chr11	+	1351	1	Antisense	novelGene_ENSMUSG00000036391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAAAGTGCAGCATAGA	2287	False	NA	NA	False	NA	NA	NA	51587077	51588428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51587100_51588400
ES.4779.1	chr11	+	1601	1	Antisense	novelGene_ENSMUSG00000036391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCACGGAGTAAGCTC	NA	False	NA	NA	False	NA	NA	NA	51603499	51605100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51603500_51605100
ES.478.1	chr1	+	3667	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAATAGCTGTAAGAGA	7526	False	NA	NA	False	NA	NA	NA	55041618	55045285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55041600_55045300
ES.4780.1	chr11	+	174	1	Intergenic	novelGene_3697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACATCTAT	5265	False	NA	NA	False	NA	NA	NA	51649591	51649765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51649600_51649800
ES.4781.1	chr11	-	3725	1	Genic_Genomic	ENSMUSG00000007777.10	novel	NA	NA	NA	NA	-222	14	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTCCTGCATACAT	4741	False	NA	2	True	ATTAAA	-28	NA	51579923	51576198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_51576200_51579900
ES.4781.2	chr11	-	851	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-27	-11	-27	11	multi-exon	FALSE	canonical	3	574	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCTTTTCCTGCATA	5157	False	NA	-1	True	ATTAAA	-25	NA	51579507	51576201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51576920_51579374
ES.4781.3	chr11	-	705	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	22	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATGCTTTTCCTGCAT	5206	False	NA	-2	True	ATTAAA	-24	NA	51579458	51576202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51576824_51579374
ES.4781.4	chr11	-	1866	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	21	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATGAATGCTTT	5205	False	NA	-10	True	ATTAAA	-16	NA	51579459	51576210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51576920_51578302
ES.4781.5	chr11	-	1133	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATGAATGCTTT	5207	False	NA	-10	True	ATTAAA	-16	NA	51579457	51576210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51576920_51579033
ES.4781.6	chr11	-	3102	1	NIC	ENSMUSG00000007777.10	novel	892	2	NA	NA	-10	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGCTTACCTG	5174	False	NA	NA	False	GATAAA	-17	NA	51579490	51576388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51576400_51579500
ES.4781.7	chr11	-	804	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	21	-176	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGCTTACCTG	5205	False	NA	NA	False	GATAAA	-17	NA	51579459	51576388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51576920_51579186
ES.4781.8	chr11	-	646	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-9	176	-9	-176	multi-exon	FALSE	canonical	3	574	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTCAGCTTACCTG	5175	False	NA	NA	False	GATAAA	-17	NA	51579489	51576388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51576920_51579374
ES.4782.15	chr11	-	7529	22	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	-4	-10	intron_retention	FALSE	canonical	0	0	junction_6	19.2245355324884	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCTTATGAAAATGT	3769	False	NA	-29	True	AATAAA	-8	NA	51647269	51583100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598187_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.17	chr11	-	3830	23	NNC	ENSMUSG00000036391.17	novel	3800	23	NA	NA	1	-180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.3800859007723	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCATTTTTTTATTT	3781	False	NA	4	True	AATAAA	-22	NA	51647257	51585641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586066_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607271_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.18	chr11	-	4014	23	FSM	ENSMUSG00000036391.17	ENSMUST00000038210.12	3800	23	-398	184	9	-184	multi-exon	FALSE	canonical	3	22	junction_16	14.7653827896746	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTCTCATTTTTTT	3602	False	NA	0	True	AATAAA	-18	NA	51647436	51585645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.2	chr11	-	6822	24	NIC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	52	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	18.4567137799196	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTTAGTTATTGAA	NA	False	NA	-18	True	AATAAA	-19	NA	51654409	51583089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903_51647662_51654385
ES.4782.20	chr11	-	3680	22	NIC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	-8	-184	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	18.8550984942807	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTCTCATTTTTTT	3765	False	NA	0	True	AATAAA	-18	NA	51647273	51585645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.21	chr11	-	3437	22	NIC	ENSMUSG00000036391.17	novel	3800	23	NA	NA	8	-184	combination_of_known_splicesites	FALSE	canonical	2	2	junction_20	20.8558381848958	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTTCTCATTTTTTT	4008	False	NA	0	True	AATAAA	-18	NA	51647030	51585645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51634362_51634828_51646903
ES.4782.22	chr11	-	5855	8	NIC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	41024	-187	intron_retention	FALSE	canonical	3	69	junction_3	7.88954358370519	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTATTTCTCATTTT	9733	False	NA	-3	True	AATAAA	-15	NA	51606014	51585648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51586069_51587475_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951
ES.4782.23	chr11	-	1779	11	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	39650	-188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.6251903545942	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTATTTCTCATTT	8359	False	NA	-4	True	AATAAA	-14	NA	51607388	51585649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598187_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265
ES.4782.24	chr11	-	3720	20	NNC	ENSMUSG00000036391.17	novel	2104	11	NA	NA	-16	-7715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.5272378843138	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTCAAGCTTGATGGC	3757	False	NA	NA	False	NA	NA	NA	51647281	51593176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51593760_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.25	chr11	-	3879	19	ISM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	393	11041	-14	-8670	5prime_fragment	FALSE	canonical	3	47	junction_17	10.7509689485801	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCTACACAATAATTTC	3986	False	NA	NA	False	NA	NA	NA	51647052	51594131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.26	chr11	-	1949	10	NIC	ENSMUSG00000036391.17	novel	2104	11	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	25.5333236630868	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGTTTTTTTCAGA	3758	False	NA	NA	False	AATAAA	-15	NA	51647280	51612515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51634362_51634828_51646903
ES.4782.27	chr11	-	2697	11	NNC	ENSMUSG00000036391.17	novel	2104	11	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	25.0750872381334	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTTTTCAG	3793	False	NA	NA	False	AATAAA	-14	NA	51647245	51612516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51625210_51625252_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.28	chr11	-	2142	11	FSM	ENSMUSG00000036391.17	ENSMUST00000064297.5	2104	11	-39	1	-39	-1	multi-exon	FALSE	canonical	3	47	junction_9	12.9015502944414	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTGTTTTTTTCA	3734	False	NA	NA	False	AATAAA	-13	NA	51647304	51612517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.29	chr11	-	3432	2	NNC	ENSMUSG00000036391.17	novel	2744	8	NA	NA	23676	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTAGGTGCCTATATA	NA	False	NA	NA	False	NA	NA	NA	51623362	51619884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51620573_51620618
ES.4782.3	chr11	-	6475	23	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	23.7115935656271	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTTAGTTATTGAA	3758	False	NA	-18	True	AATAAA	-19	NA	51647280	51583089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598187_51599761_51599873_51603013_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.30	chr11	-	2046	8	FSM	ENSMUSG00000036391.17	ENSMUST00000147255.2	2744	8	708	-10	-15	10	multi-exon	FALSE	canonical	3	47	junction_6	14.2270222908839	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTAGGTGCCTATATA	3758	False	NA	NA	False	NA	NA	NA	51647280	51619884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.31	chr11	-	1807	9	NNC	ENSMUSG00000036391.17	novel	2744	8	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.7438661191683	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCCATCTAGG	3736	False	NA	NA	False	NA	NA	NA	51647302	51619894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51620028_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.32	chr11	-	3621	5	NNC	ENSMUSG00000036391.17	novel	2744	8	NA	NA	-22	-2950	intron_retention	TRUE	non_canonical	0	0	junction_1	31.7755802464723	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCATTTGTAATCTGAT	3751	False	NA	NA	False	AATAAA	-18	NA	51647287	51622844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51625177_51625219_51625489_51627177_51627349_51634362_51634828_51646903
ES.4782.33	chr11	-	4974	1	Genic_Genomic	ENSMUSG00000036391.17	novel	NA	NA	NA	NA	13304	2628	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGATTGTTCACCCCTGG	4240	False	NA	NA	False	NA	NA	NA	51633734	51628760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_51628800_51633700
ES.4782.34	chr11	-	5343	3	NNC	ENSMUSG00000036391.17	novel	4273	3	NA	NA	-8	1587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGAGGTTTTTGTTTTGT	3765	False	NA	NA	False	ATTAAA	-24	NA	51647273	51629801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51631196_51631248_51634828_51646903
ES.4782.35	chr11	-	1499	1	Intergenic	novelGene_3695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAACAATGAGGTTTT	6666	False	NA	NA	False	ATTAAA	-16	NA	51631308	51629809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51629800_51631300
ES.4782.36	chr11	-	2836	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7149	1012	-47	-1012	3prime_fragment	FALSE	canonical	3	83	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTACTTCCTCAGTT	3726	False	NA	NA	False	AAGAAA	-12	NA	51647312	51632400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51634828_51646903
ES.4782.37	chr11	-	1740	2	ISM	ENSMUSG00000036391.17	ENSMUST00000154325.2	4273	3	7216	2041	13	-2041	3prime_fragment	FALSE	canonical	3	83	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTACTGGTTCATTT	3793	False	NA	NA	False	AATAAA	-17	NA	51647245	51633429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51634828_51646903
ES.4782.38	chr11	-	185	1	Intergenic	novelGene_3696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACATGA	10010	False	NA	NA	False	NA	NA	NA	51640787	51640602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51640600_51640800
ES.4782.4	chr11	-	5968	23	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	18373	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.4470188358446	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATGTTAGTTATTGA	9309	False	NA	-19	True	AATAAA	-18	NA	51628665	51583090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608107_51608181_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51628344
ES.4782.5	chr11	-	6923	25	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	26.79033822523	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATGTTAGTTATTGA	NA	False	NA	-19	True	AATAAA	-18	NA	51654438	51583090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608107_51608181_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903_51647662_51654385
ES.4782.6	chr11	-	6244	22	NIC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_20	18.1137749665114	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAATGTTAGTTATTG	3758	False	NA	-20	True	AATAAA	-17	NA	51647280	51583091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51634362_51634828_51646903
ES.4782.9	chr11	-	6040	4	NNC	ENSMUSG00000036391.17	novel	6581	23	NA	NA	39834	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	41.9550023504018	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAAATGTTAGTTATT	8543	False	NA	-21	True	AATAAA	-16	NA	51607204	51583092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51586069_51587475_51588242_51594525_51596479_51606859
ES.4783.1	chr11	+	1293	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	-64	-28	-64	28	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTCTTGTGGCTAGTG	3501	False	NA	40	True	AAAACA	-43	NA	51654449	51682780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4783.10	chr11	+	1960	1	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	26097	-175	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCATGTGAAACTTTT	NA	False	NA	1	True	TATAAA	-13	NA	51680617	51682577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51680600_51682600
ES.4783.2	chr11	+	1325	8	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	337.800629522981	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAGTGTTGGGCAGCT	3567	False	NA	10	True	AATAAA	-16	NA	51654515	51682750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51654619_51666428_51666557_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4783.3	chr11	+	1089	6	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	301.991125697428	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3573	False	NA	12	True	AATAAA	-18	NA	51654521	51682752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51680023_51680156_51682153
ES.4783.4	chr11	+	1118	6	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	291.41544228129	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3573	False	NA	12	True	AATAAA	-18	NA	51654521	51682752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51654619_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4783.5	chr11	+	1017	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	13	171	6	-171	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTGAAACTTTTATGT	3578	False	NA	5	True	TATAAA	-17	NA	51654526	51682581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4783.6	chr11	+	2119	6	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	18	0	intron_retention	FALSE	canonical	3	707	junction_3	33.2204756136934	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3590	False	NA	12	True	AATAAA	-18	NA	51654538	51682752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51680156_51682153
ES.4783.7	chr11	+	779	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	27	395	20	-395	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGTGTTTTTAGATTAT	3592	False	NA	NA	False	AATAGA	-17	NA	51654540	51682357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4783.8	chr11	+	1111	7	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	378.350550269045	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCAGTGTTGGGCAGCT	3592	False	NA	10	True	AATAAA	-16	NA	51654540	51682750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51654619_51668313_51668389_51670058_51670102_51670515_51670636_51673598_51673665_51680023_51680156_51682153
ES.4783.9	chr11	+	1249	8	NNC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	338.166786527305	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3593	False	NA	12	True	AATAAA	-18	NA	51654541	51682752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51654619_51668313_51668389_51670058_51670135_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ES.4784.1	chr11	-	209	1	Intergenic	novelGene_3698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51699749	51699540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51699500_51699700
ES.4785.1	chr11	-	6145	13	NNC	ENSMUSG00000020387.16	novel	6099	13	NA	NA	452	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.61385330617149	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACGTTCTGTTGTGTT	9328	False	NA	-5	True	AATAAA	-23	NA	51747500	51704275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51747379
ES.4785.10	chr11	-	2130	1	ISM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	41717	352	41189	-347	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGCTTATGTTGCAA	NA	False	NA	NA	False	AATATA	-23	NA	51706763	51704633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51704600_51706800
ES.4785.11	chr11	-	5199	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	112	962	112	-957	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTAAATGGGCTCTGA	8460	False	NA	NA	False	AGTAAA	-23	NA	51748368	51705243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
ES.4785.12	chr11	-	3344	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	-377	3306	-377	-3301	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTCTTTCCTCTGT	7971	False	NA	0	True	AATATA	-20	NA	51748857	51707587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
ES.4785.13	chr11	-	2805	13	NIC	ENSMUSG00000020387.16	novel	6099	13	NA	NA	0	-3302	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	6.44204936336256	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTTGTCTTTCCTCTG	8876	False	NA	-1	True	AATATA	-19	NA	51747952	51707588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51747858
ES.4785.14	chr11	-	3047	13	FSM	ENSMUSG00000020387.16	ENSMUST00000109091.2	6099	13	-251	3303	6	-3303	multi-exon	FALSE	canonical	0	0	junction_11	6.12145589073565	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCGTTGTCTTTCCTCT	8354	False	NA	-2	True	AATATA	-18	NA	51748474	51707589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51748137
ES.4785.15	chr11	-	236	1	Intergenic	novelGene_3699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAACTCAGGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	51719687	51719451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51719500_51719700
ES.4785.2	chr11	-	6271	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	6	-4	6	4	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGACGTTCTGTTGTG	8354	False	NA	-7	True	AATAAA	-21	NA	51748474	51704277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
ES.4785.3	chr11	-	6095	13	NIC	ENSMUSG00000020387.16	novel	6099	13	NA	NA	21	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	6.44204936336256	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGACGTTCTGTTGTG	8897	False	NA	-7	True	AATAAA	-21	NA	51747931	51704277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51747858
ES.4785.4	chr11	-	5991	12	NIC	ENSMUSG00000020387.16	novel	6273	12	NA	NA	35	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	5.3397000565776	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCATGACGTTCTGTTG	8911	False	NA	-9	True	AATAAA	-19	NA	51747917	51704279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51747858
ES.4785.5	chr11	-	6114	13	NNC	ENSMUSG00000020387.16	novel	6099	13	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	6.61385330617149	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCATGACGTTCTG	8323	False	NA	-12	True	AATAAA	-16	NA	51748505	51704282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51748408
ES.4785.7	chr11	-	6062	12	NNC	ENSMUSG00000020387.16	novel	6273	12	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	4.82931817647034	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCATGACGTTCTG	8287	False	NA	-12	True	AATAAA	-16	NA	51748541	51704282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748408
ES.4785.8	chr11	-	6719	13	FSM	ENSMUSG00000020387.16	ENSMUST00000109091.2	6099	13	-616	-4	-359	-1	multi-exon	FALSE	canonical	0	0	junction_11	6.12145589073565	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGCCATGACGTTCTG	7989	False	NA	-12	True	AATAAA	-16	NA	51748839	51704282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51748137
ES.4786.1	chr11	+	168	1	Intergenic	novelGene_3700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTATTTTCAGA	1409	False	NA	NA	False	NA	NA	NA	51757351	51757519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51757400_51757500
ES.4787.1	chr11	+	176	1	Intergenic	novelGene_3701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAATA	2739	False	NA	NA	False	NA	NA	NA	51758681	51758857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51758700_51758900
ES.4788.1	chr11	+	6868	1	Intergenic	novelGene_3702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGATCTCCCT	7732	False	NA	NA	False	NA	NA	NA	51771447	51778315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51771400_51778300
ES.4788.2	chr11	+	3268	2	Intergenic	novelGene_3703	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAGAGATCTCCCT	9153	False	NA	NA	False	NA	NA	NA	51772868	51778315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51773047_51775225
ES.4789.1	chr11	-	163	1	Intergenic	novelGene_3704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCATC	NA	False	NA	NA	False	NA	NA	NA	51818444	51818281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51818300_51818400
ES.479.1	chr1	+	4154	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-41	NA	55045340	55049494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_55045300_55049500
ES.4790.1	chr11	-	174	1	Intergenic	novelGene_3705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	6499	False	NA	NA	False	NA	NA	NA	51851516	51851342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51851300_51851500
ES.4791.1	chr11	+	5267	2	ISM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-32	2253	-32	-1163	5prime_fragment	FALSE	canonical	3	1066	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	51858455	51865908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51858785_51860970
ES.4791.10	chr11	+	611	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-4	1225	-4	-135	multi-exon	FALSE	canonical	3	1066	junction_1	20	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATACATGGCGAACTCTC	NA	False	NA	-93	True	AATACA	-17	NA	51858483	51866936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51858785_51860970_51861071_51866726
ES.4791.11	chr11	+	2236	3	NNC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	-3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	533	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTCAAGTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-24	NA	51858484	51868165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51858785_51860970_51861468_51866726
ES.4791.12	chr11	+	2201	3	NIC	ENSMUSG00000020392.9	novel	637	4	NA	NA	21	-4	intron_retention	FALSE	canonical	2	20	junction_1	543	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTTAGGTTCAAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	51858508	51868157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51859179_51860970_51861071_51866726
ES.4791.13	chr11	+	5365	1	NIC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	-109	-3097	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGGAAAATGAGCAATAAT	NA	False	NA	NA	False	NA	NA	NA	51858609	51863974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51858600_51864000
ES.4791.2	chr11	+	1862	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-23	-7	-23	7	multi-exon	FALSE	canonical	3	1066	junction_1	20	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGTTGTGTGATTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	51858464	51868168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51858785_51860970_51861071_51866726
ES.4791.3	chr11	+	793	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-22	1061	-22	29	multi-exon	FALSE	canonical	3	1066	junction_1	20	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTTTGTCCTGAGCC	NA	False	NA	45	True	AATACA	-22	NA	51858465	51867100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51858785_51860970_51861071_51866726
ES.4791.4	chr11	+	1752	2	NIC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTAGGTTCAAGTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	51858465	51868159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51858785_51866726
ES.4791.5	chr11	+	1319	4	NNC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	504.667107001129	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858466	51868161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51858785_51860970_51861071_51866726_51867028_51867561
ES.4791.6	chr11	+	7442	1	Genic_Genomic	ENSMUSG00000020392.9	novel	NA	NA	NA	NA	-21	-1163	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	51858466	51865908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_51858500_51865900
ES.4791.7	chr11	+	1592	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	-21	261	-21	-261	multi-exon	FALSE	canonical	3	1066	junction_1	20	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGATTCGATACCTTG	NA	False	NA	NA	False	AATAAA	-40	NA	51858466	51867900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51858785_51860970_51861071_51866726
ES.4791.8	chr11	+	3840	3	NNC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_1	553	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858470	51868161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51859377_51859571_51861071_51866726
ES.4791.9	chr11	+	1789	4	NNC	ENSMUSG00000020392.9	novel	637	4	NA	NA	-15	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	512.205687850757	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTTAGGTTCAAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	51858472	51868157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51858785_51860970_51861071_51866726_51867269_51867322
ES.4792.1	chr11	-	482	1	Intergenic	novelGene_3706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTCTGTTTTTGCTTT	723	False	NA	NA	False	AGTAAA	-14	NA	51874275	51873793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51873800_51874300
ES.4793.1	chr11	+	5332	1	Antisense	novelGene_ENSMUSG00000020390.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGCAGTAGTGGCGC	145	False	NA	NA	False	NA	NA	NA	51884419	51889751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_51884400_51889800
ES.4794.11	chr11	-	3456	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	-7	409	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	-1	True	AATACA	-15	NA	51891318	51877084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
ES.4794.12	chr11	-	3718	2	ISM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	8986	-409	8703	409	intron_retention	FALSE	canonical	3	792	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	-1	True	AATACA	-15	NA	51882603	51877084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51877638_51879438
ES.4794.14	chr11	-	1672	8	NNC	ENSMUSG00000020390.13	novel	585	7	NA	NA	-3356	405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	301.586147032042	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGACTTTGTCACTTA	NA	False	NA	-5	True	AATACA	-11	NA	51894945	51877088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51892895_51893042_51894323
ES.4794.15	chr11	-	870	4	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	35	404	combination_of_known_splicesites	FALSE	canonical	2	15	junction_2	341.18062990478	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGAGACTTTGTCACTT	NA	False	NA	-6	True	AATACA	-10	NA	51891271	51877089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51879528_51888644_51888726_51891119
ES.4794.16	chr11	-	857	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	19	-291	19	291	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAATGCCTTATTT	NA	False	NA	-22	True	AATATA	-28	NA	51891570	51877202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ES.4794.18	chr11	-	913	6	NNC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	16	282	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	274.754435814966	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTTCAAATATTGAAT	NA	False	NA	-31	True	AATATA	-19	NA	51891290	51877211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888614_51888726_51891119
ES.4794.19	chr11	-	3301	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	16	282	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTTCAAATATTGAAT	NA	False	NA	-31	True	AATATA	-19	NA	51891290	51877211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
ES.4794.2	chr11	-	5689	2	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	7440	58	7435	-58	intron_retention	FALSE	canonical	3	792	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51883871	51876381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51877638_51879438
ES.4794.20	chr11	-	3937	2	ISM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	8639	-281	8356	281	intron_retention	FALSE	canonical	3	792	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTTTTCAAATATTGAA	NA	False	NA	31	True	AATATA	-18	NA	51882950	51877212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51877638_51879438
ES.4794.21	chr11	-	4335	1	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	9752	274	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTACTTTTTTCAAA	NA	False	NA	24	True	AATATA	-11	NA	51881554	51877219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877200_51881600
ES.4794.22	chr11	-	742	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	4	1046	-1	124	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTGTGTATCTTGAT	NA	False	NA	-126	True	AAAAAG	-27	NA	51891307	51877369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ES.4794.23	chr11	-	623	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	6	1163	1	7	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCGTTGTTGTGTATAA	NA	False	NA	NA	False	AATAGA	-19	NA	51891305	51877486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ES.4794.24	chr11	-	4524	2	FSM	ENSMUSG00000020390.13	ENSMUST00000124699.2	516	2	24	-4032	24	4032	multi-exon	FALSE	canonical	3	670	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTACAATATCAGACCTG	NA	False	NA	NA	False	NA	NA	NA	51891282	51884364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51888726_51891119
ES.4794.26	chr11	-	3532	3	FSM	ENSMUSG00000020390.13	ENSMUST00000147833.2	408	3	18	-3142	18	3066	multi-exon	FALSE	canonical	3	81	junction_2	294.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGTTACTATGAACTAT	NA	False	NA	NA	False	NA	NA	NA	51891571	51885330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51888726_51891119_51891189_51891503
ES.4794.27	chr11	-	1109	1	Intergenic	novelGene_3707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAAACAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	51894946	51893837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51893800_51894900
ES.4794.3	chr11	-	4166	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	-14	-58	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51891325	51876381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
ES.4794.4	chr11	-	1736	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	-39	-1112	-39	-58	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTCTCTCTAGTAGT	NA	False	NA	0	True	AGTAAA	-16	NA	51891628	51876381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ES.4794.5	chr11	-	5629	3	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	3353	-310	intron_retention	FALSE	canonical	3	629	junction_2	81.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTGTAACTTGAATAT	NA	False	NA	NA	False	NA	NA	NA	51887953	51876633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51882311_51886200
ES.4794.6	chr11	-	1450	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	30	312	25	-312	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGGTGTAACTTGAAT	NA	False	NA	NA	False	NA	NA	NA	51891281	51876635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ES.4794.7	chr11	-	3784	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	33	-388	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTACCAAACACCGTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	51891273	51876711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
ES.4794.8	chr11	-	2580	2	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	9973	634	9968	536	3prime_fragment	FALSE	canonical	3	792	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAATTCTGATCTCCG	NA	False	NA	NA	False	AAGAAA	-19	NA	51881338	51876957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_51877638_51879438
ES.4794.9	chr11	-	1154	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	4	634	-1	536	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAATTCTGATCTCCG	NA	False	NA	NA	False	AAGAAA	-19	NA	51891307	51876957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ES.4795.1	chr11	+	1796	9	NIC	ENSMUSG00000020389.20	novel	2051	13	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	2.64575131106459	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCCACAGAGTCCAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	51895053	51918388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51895245_51895739_51895920_51901957_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839
ES.4795.2	chr11	+	2208	13	NNC	ENSMUSG00000020389.20	novel	2051	13	NA	NA	1	577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	3.67706857881837	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAGGAACAGTGGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	51895092	51925273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51895245_51895739_51895920_51901957_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51924957
ES.4795.3	chr11	+	3915	13	NIC	ENSMUSG00000020389.20	novel	2765	13	NA	NA	-6	-1122	intron_retention	FALSE	canonical	0	0	junction_12	3.67706857881837	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTATTTTTTAAGAC	NA	False	NA	NA	False	ACTAAA	-29	NA	51895110	51930298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51895245_51895739_51895920_51901957_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51928257
ES.4795.4	chr11	+	1427	4	ISM	ENSMUSG00000020389.20	ENSMUST00000109076.2	1610	8	-31	8429	28	-631	5prime_fragment	FALSE	canonical	2	3	junction_1	3.55902608401044	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATGTAAT	NA	False	NA	NA	False	NA	NA	NA	51895144	51909962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51895338_51895739_51895920_51901957_51902153_51909103
ES.4795.5	chr11	+	750	1	NIC	ENSMUSG00000020389.20	novel	2051	13	NA	NA	0	-14668	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGCCTTTTATTATA	NA	False	NA	NA	False	AATAAA	-17	NA	51895175	51895925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51895200_51895900
ES.4795.6	chr11	+	1226	6	NNC	ENSMUSG00000020389.20	novel	1610	8	NA	NA	3	3375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.31740662898458	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGACTTTCTGTGTTTC	NA	False	NA	NA	False	GATAAA	-12	NA	51895178	51913968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51895338_51895739_51895920_51901957_51902153_51909103_51909283_51910556_51910666_51913564
ES.4795.7	chr11	+	3897	15	NNC	ENSMUSG00000020389.20	novel	2770	14	NA	NA	8	7204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.16067596548877	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGCCTTGAATTGCCT	NA	False	NA	NA	False	NA	NA	NA	51895183	51938624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51895338_51895736_51895920_51901957_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51926773_51926848_51931387_51931448_51936758
ES.4795.8	chr11	+	176	1	Intergenic	novelGene_3708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAAAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	51898423	51898599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51898400_51898600
ES.4796.1	chr11	+	1248	1	Intergenic	novelGene_3709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51945115	51946363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51945100_51946400
ES.4797.1	chr11	-	182	1	Intergenic	novelGene_3710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTAGACTTTGA	3340	False	NA	NA	False	NA	NA	NA	51946764	51946582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51946600_51946800
ES.4798.1	chr11	+	3609	1	NIC	ENSMUSG00000020389.20	novel	631	5	NA	NA	52637	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATTGTCTGCCTCCT	9314	False	NA	NA	False	AATAAA	-15	NA	51976993	51980602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51977000_51980600
ES.4799.1	chr11	+	3127	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	-337	4312	-337	3774	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTTTGTGAGTTAA	NA	False	NA	85	True	NA	NA	NA	51989170	52014293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.12	chr11	+	4633	5	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	143	3748	intron_retention	FALSE	canonical	3	1809	junction_4	148.965600055852	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	59	True	NA	NA	NA	51989650	52014267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52011879_52012728
ES.4799.14	chr11	+	4348	2	ISM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	143	10638	143	-2552	5prime_fragment	FALSE	canonical	3	2197	junction_1	0	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGAAATGAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	51989650	52007967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_51989978_52003946
ES.4799.15	chr11	+	6223	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	145	2695	intron_retention	FALSE	canonical	3	1809	junction_5	131.928768659455	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGCCTCCCCTCTTGTT	NA	False	NA	NA	False	AATGAA	-17	NA	51989652	52013214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.17	chr11	+	2423	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	146	3045	intron_retention	FALSE	canonical	3	1809	junction_5	140.67636617428	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTGGCAACTCCTT	NA	False	NA	22	True	AATAAA	-18	NA	51989653	52013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.19	chr11	+	3541	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	148	3045	intron_retention	FALSE	canonical	3	1809	junction_5	135.490811496573	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTGGCAACTCCTT	NA	False	NA	22	True	AATAAA	-18	NA	51989655	52013564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52011879_52012728
ES.4799.2	chr11	+	2196	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	-123	5029	-123	3057	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGGTGTTCTTCAG	NA	False	NA	34	True	AATAAA	-30	NA	51989384	52013576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.20	chr11	+	1937	8	NNC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	150	3774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	720.362607104426	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTTTGTGAGTTAA	NA	False	NA	85	True	NA	NA	NA	51989657	52014293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728_52013561_52014263
ES.4799.21	chr11	+	7801	5	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	154	3774	intron_retention	FALSE	canonical	3	1809	junction_4	147.348226999852	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTTTGTGAGTTAA	NA	False	NA	85	True	NA	NA	NA	51989661	52014293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.22	chr11	+	1606	7	NNC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	156	2917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	758.334450548628	931	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTCAGGTTTGAATTG	NA	False	NA	22	True	AATAAA	-12	NA	51989663	52013436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51989978_52003946_52003986_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.23	chr11	+	2207	4	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	157	3774	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	957.417475410921	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTTTGTGAGTTAA	NA	False	NA	85	True	NA	NA	NA	51989664	52014293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52011759_52011879_52012728
ES.4799.24	chr11	+	4472	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	159	2471	159	-2471	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTGTTTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	51989666	52016134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.25	chr11	+	6561	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	159	3047	intron_retention	FALSE	canonical	3	1809	junction_5	131.928768659455	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGGCAACTCCTTGG	NA	False	NA	24	True	AATAAA	-20	NA	51989666	52013566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.26	chr11	+	2270	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	173	2919	intron_retention	FALSE	canonical	3	1809	junction_5	140.67636617428	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGTTTGAATTGTA	NA	False	NA	24	True	AATAAA	-14	NA	51989680	52013438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.27	chr11	+	3386	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	177	2919	intron_retention	FALSE	canonical	3	1809	junction_5	135.490811496573	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAGGTTTGAATTGTA	NA	False	NA	24	True	AATAAA	-14	NA	51989684	52013438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52011879_52012728
ES.4799.28	chr11	+	1994	7	NNC	ENSMUSG00000020349.5	novel	566	2	NA	NA	690	3044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	751.531639756807	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTCTGGCAACTCCT	NA	False	NA	21	True	AATAAA	-17	NA	51990197	52013563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_51990602_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.29	chr11	+	181	1	Intergenic	novelGene_3711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACAGATAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	51993618	51993799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_51993600_51993800
ES.4799.3	chr11	+	1998	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	-44	5148	-44	2938	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGGGCACGACTGGTG	NA	False	NA	43	True	AATAAA	-33	NA	51989463	52013457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.30	chr11	+	1967	5	NNC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	-650	3746	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	858.094546072867	929	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	4566	False	NA	57	True	NA	NA	NA	52008919	52014265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52008988_52009495_52009586_52009969_52010123_52011759_52011879_52012728
ES.4799.31	chr11	+	3360	1	FSM	ENSMUSG00000092870.3	ENSMUST00000175129.3	91	1	-2327	-942	-2327	942	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGTGTCGCACAGTC	NA	False	NA	NA	False	AATAAA	-21	NA	52015245	52018605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52015200_52018600
ES.4799.4	chr11	+	1484	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	-21	5639	-21	2447	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCCGTGACCACTTTAG	NA	False	NA	NA	False	TATAAA	-21	NA	51989486	52012966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.5	chr11	+	2167	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	41	4894	41	3192	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTTATGTTTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	51989548	52013711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.6	chr11	+	1586	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	124	5392	124	2694	multi-exon	FALSE	canonical	3	1809	junction_6	129.264586539908	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGGCCTCCCCTCTTGT	NA	False	NA	NA	False	AATGAA	-16	NA	51989631	52013213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.4799.7	chr11	+	4265	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	127	3748	intron_retention	FALSE	canonical	3	1809	junction_5	135.490811496573	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	59	True	NA	NA	NA	51989634	52014267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52011879_52012728
ES.4799.8	chr11	+	2427	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	127	3748	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	789.446134957921	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	59	True	NA	NA	NA	51989634	52014267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_51989978_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ES.48.1	chr1	+	140	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATAATAATAA	NA	False	NA	NA	False	GATAAA	-19	NA	7249831	7249971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7249800_7250000
ES.480.1	chr1	+	3176	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGATTCCCTGGAAC	NA	False	NA	NA	False	NA	NA	NA	55066757	55069933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55066800_55069900
ES.4800.1	chr11	-	1905	1	FSM	ENSMUSG00002076463.1	ENSMUST00020183590.1	111	1	-77	-1717	-77	1717	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTATAAAGCCATGTTC	8843	False	NA	NA	False	AATAAA	-16	NA	51990057	51988152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51988200_51990100
ES.4800.2	chr11	-	1186	1	FSM	ENSMUSG00002076463.1	ENSMUST00020183590.1	111	1	-859	-216	-859	216	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGCGGCCGCCCGGCGTG	9948	False	NA	NA	False	NA	NA	NA	51990839	51989653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_51989700_51990800
ES.4801.1	chr11	-	103	1	Intergenic	novelGene_3712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTAATCTTGGGGGTGG	5811	False	NA	NA	False	NA	NA	NA	51994976	51994873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_51994900_51995000
ES.4802.1	chr11	-	3668	2	ISM	ENSMUSG00000108218.3	ENSMUST00000203403.3	9812	3	8346	160	-3530	-160	3prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAGAGGGCAGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	52050640	52045708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_52047340_52048603
ES.4802.2	chr11	-	2961	2	ISM	ENSMUSG00000108218.3	ENSMUST00000203403.3	9812	3	8738	475	-3138	153	3prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTTCTAGATCCTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	52050248	52046023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_52047340_52048603
ES.4803.1	chr11	+	178	1	Intergenic	novelGene_3713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATCTGAG	NA	False	NA	NA	False	NA	NA	NA	52071797	52071975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_52071800_52072000
ES.4804.1	chr11	-	160	1	Intergenic	novelGene_3714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	52107682	52107522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52107500_52107700
ES.4805.1	chr11	+	1912	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	-7334	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1908.08557343625	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTTCTTAATGAAT	NA	False	NA	35	True	AATAAA	-42	NA	52115487	52137686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52115633_52122509_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.10	chr11	+	2180	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-185	intron_retention	FALSE	canonical	3	4483	junction_3	373.825744833071	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	440	False	NA	13	True	ATTAAA	-16	NA	52122864	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52133413_52134586_52135807_52135949_52136811
ES.4805.11	chr11	+	1290	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-24	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	2106.24433233659	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAACAGTTGCTTTTGTG	440	False	NA	10	True	AATAAA	-17	NA	52122864	52137661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.12	chr11	+	1216	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2087.99440612277	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGTATGTCATCTT	440	False	NA	10	True	ATTAAA	-13	NA	52122864	52137497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135814_52135949_52136811
ES.4805.13	chr11	+	900	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	304	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2031.01143275955	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATGCTGAAATA	440	False	NA	85	True	AATAAA	-8	NA	52122864	52137183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52133413_52133488_52134450_52134586_52135807_52135949_52136811
ES.4805.14	chr11	+	667	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	29	744	1	62	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCGCCTTGTCTTCAC	440	False	NA	NA	False	NA	NA	NA	52122864	52136941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.15	chr11	+	1217	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2031.01143275955	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	440	False	NA	13	True	ATTAAA	-16	NA	52122864	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52133413_52133488_52134450_52134586_52135807_52135949_52136811
ES.4805.16	chr11	+	1315	7	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-185	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	2365.51336335735	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	440	False	NA	13	True	ATTAAA	-16	NA	52122864	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52128210_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.17	chr11	+	906	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	230	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2390.64833721361	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCCTCTAGTTCATT	440	False	NA	11	True	NA	NA	NA	52122864	52137109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52128364_52128436_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.18	chr11	+	1479	7	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-21	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	2365.51336335735	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTGCTTTTGTGGAT	440	False	NA	13	True	AATAAA	-20	NA	52122864	52137664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52128210_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.2	chr11	+	1854	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	-1685	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1909.92324598544	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATCTTTTTATCATCA	219	False	NA	20	True	ATTAAA	-23	NA	52121136	52137507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52121403_52122509_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.20	chr11	+	2291	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-74	intron_retention	FALSE	canonical	3	4483	junction_3	373.825744833071	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCATCCTAAGTGCAAGA	440	False	NA	36	True	ATTAAA	-23	NA	52122864	52137611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52133413_52134586_52135807_52135949_52136811
ES.4805.21	chr11	+	1381	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	3	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2054.41382394103	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTGCTTTTGTGGAT	442	False	NA	13	True	AATAAA	-20	NA	52122866	52137664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52133420_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.22	chr11	+	885	7	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	3	193	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	2365.51336335735	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGGCATTTTGGGCTT	442	False	NA	26	True	AATAAA	-23	NA	52122866	52137072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52128210_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.23	chr11	+	1295	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	3	-185	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2390.64833721361	926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	442	False	NA	13	True	ATTAAA	-16	NA	52122866	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52128364_52128436_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.24	chr11	+	1504	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	7	-22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2374.78670387235	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGTTGCTTTTGTGGA	446	False	NA	12	True	AATAAA	-19	NA	52122870	52137663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127663_52127761_52128178_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.25	chr11	+	3526	2	ISM	ENSMUSG00000036309.15	ENSMUST00000093121.13	353	3	19	-1875	19	1875	intron_retention	FALSE	canonical	3	5540	junction_1	0	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAGAAAAAAGAGT	458	False	NA	NA	False	NA	NA	NA	52122882	52131126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_52122946_52127663
ES.4805.26	chr11	+	1554	6	FSM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	13	187	13	-187	multi-exon	FALSE	canonical	2	5	junction_1	1986.48266038242	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTATGTCATCTTT	604	False	NA	11	True	ATTAAA	-14	NA	52123028	52137498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52123440_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.3	chr11	+	1970	7	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	-1075	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1909.92324598544	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAAGGTTTTTTTTTTTT	829	False	NA	52	True	AGTAAA	-37	NA	52121746	52137703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52121933_52122509_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.4	chr11	+	1000	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	-26	466	-12	340	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGTTCATGAATCGGA	385	False	NA	121	True	AATAAA	-44	NA	52122809	52137219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.6	chr11	+	833	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	28	579	0	227	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTCTGCCTCTAGTTC	439	False	NA	8	True	NA	NA	NA	52122863	52137106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.7	chr11	+	1083	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-185	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	2227.98401026578	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	439	False	NA	13	True	ATTAAA	-16	NA	52122863	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52133413_52133488_52135807_52135949_52136811
ES.4805.8	chr11	+	1391	8	NIC	ENSMUSG00000036309.15	novel	667	7	NA	NA	0	-191	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	2517.8279187767	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCATGTGGTATGTCAT	439	False	NA	7	True	ATTAAA	-10	NA	52122863	52137494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52122946_52127663_52127761_52129077_52129178_52133231_52133302_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4805.9	chr11	+	1266	6	NNC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	1	-185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1988.07028044785	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	440	False	NA	13	True	ATTAAA	-16	NA	52122864	52137500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52122946_52127623_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ES.4806.1	chr11	-	1120	1	Antisense	novelGene_ENSMUSG00000036309.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AGTAAA	-39	NA	52138499	52137379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_52137400_52138500
ES.4807.1	chr11	-	3056	11	FSM	ENSMUSG00000000782.17	ENSMUST00000109071.3	2059	11	-44	-953	-44	88	multi-exon	FALSE	canonical	3	39	junction_6	94.0672631684371	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174202	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.10	chr11	-	3177	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-72	85	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	90.6081382147531	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174230	52143112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.11	chr11	-	3110	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	3	85	intron_retention	FALSE	canonical	3	45	junction_1	64.362016250289	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174155	52143112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.13	chr11	-	3991	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	177	85	intron_retention	FALSE	canonical	3	39	junction_6	87.0916758364426	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52173981	52143112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.14	chr11	-	2503	9	NNC	ENSMUSG00000000782.17	novel	813	9	NA	NA	218	85	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	82.2525645496844	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	2641	False	NA	-4	True	AATAAA	-26	NA	52165486	52143112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52165376
ES.4807.16	chr11	-	2478	9	NNC	ENSMUSG00000000782.17	novel	813	9	NA	NA	-27	82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	83.3478216571975	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	2396	False	NA	-7	True	AATAAA	-23	NA	52165731	52143115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52165643
ES.4807.17	chr11	-	2808	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	76	82	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	85.2459737058464	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174082	52143115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52144768_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.18	chr11	-	2753	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	14	82	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_1	76.6025496787408	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174144	52143115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.19	chr11	-	2895	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-35	82	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	101.114242320259	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGACTGAGTAGCTG	NA	False	NA	-7	True	AATAAA	-23	NA	52174193	52143115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.2	chr11	-	3082	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-90	88	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174248	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.20	chr11	-	2465	8	NNC	ENSMUSG00000000782.17	novel	2471	10	NA	NA	12795	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	97.8171972693588	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGACTGAGTAGC	NA	False	NA	-9	True	AATAAA	-21	NA	52152909	52143117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52152759
ES.4807.22	chr11	-	2440	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-192	80	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	78.4805708439993	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGACTGAGTAGC	NA	False	NA	-9	True	AATAAA	-21	NA	52173590	52143117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52144768_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538
ES.4807.23	chr11	-	2938	13	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	14	80	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	94.443839867346	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTCTGACTGAGTAGC	NA	False	NA	-9	True	AATAAA	-21	NA	52174144	52143117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52144768_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.24	chr11	-	5178	9	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	27	79	intron_retention	FALSE	canonical	3	214	junction_4	18.8111502838077	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTCTGACTGAGTAG	NA	False	NA	-10	True	AATAAA	-20	NA	52174131	52143118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.26	chr11	-	3096	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-12	79	intron_retention	FALSE	canonical	3	108	junction_1	46.9328388021084	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGTCTGACTGAGTAG	NA	False	NA	-10	True	AATAAA	-20	NA	52174170	52143118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.27	chr11	-	3130	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-1079	78	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	96.717361077959	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAGTCTGACTGAGTA	NA	False	NA	-11	True	AATAAA	-19	NA	52175237	52143119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52174778
ES.4807.28	chr11	-	3082	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-57	78	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	97.915269493578	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAGTCTGACTGAGTA	NA	False	NA	-11	True	AATAAA	-19	NA	52174215	52143119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.3	chr11	-	2986	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-44	88	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	70.8071629214704	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174202	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.30	chr11	-	3124	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-57	76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	89.1737629574978	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAAAGTCTGACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	52174215	52143121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173138_52173538_52173606_52173754
ES.4807.32	chr11	-	4136	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-20	76	combination_of_known_splicesites	FALSE	canonical	3	174	junction_1	28.2881993457028	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAAAGTCTGACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	52174178	52143121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.33	chr11	-	2904	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-22	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.2975887029365	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCAAAGTCTGACTGA	NA	False	NA	-14	True	AATAAA	-16	NA	52174180	52143122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144007_52144103_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.34	chr11	-	5204	8	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	97	74	intron_retention	FALSE	canonical	3	214	junction_3	17.645025893308	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTCAAAGTCTGACTG	NA	False	NA	-15	True	AATAAA	-15	NA	52174061	52143123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_52147134_52147566_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.35	chr11	-	168	1	Intergenic	novelGene_3715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	9963	False	NA	NA	False	NA	NA	NA	52158164	52157996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52158000_52158200
ES.4807.4	chr11	-	2992	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-73	88	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174231	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.5	chr11	-	3068	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-53	88	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174211	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.6	chr11	-	4162	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-1077	88	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	83.2218979447156	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52175235	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.7	chr11	-	2885	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-39	88	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	71.3401009250758	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTAGCTGTTTGAG	NA	False	NA	-1	True	AATAAA	-29	NA	52174197	52143109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144644_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.8	chr11	-	3796	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-38	86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	97.4039896004401	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGAGTAGCTGTTTG	NA	False	NA	-3	True	AATAAA	-27	NA	52174196	52143111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52151664_52152452_52172948_52173074_52173538_52173606_52173754
ES.4807.9	chr11	-	3217	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-38	85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.8090364006825	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174196	52143112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_52144790_52145735_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ES.4808.1	chr11	+	197	1	Intergenic	novelGene_3716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	52194383	52194580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_52194400_52194600
ES.4809.1	chr11	-	2913	1	Intergenic	novelGene_3717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAATAAAGATAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	52237940	52235027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52235000_52237900
ES.481.1	chr1	-	6230	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	-16	-19	-16	19	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTAGTTGACTCTCTA	NA	False	NA	10	True	AATAAA	-36	NA	55066656	55024308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.102	chr1	-	4138	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-6	-1856	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_3	315.484669023534	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066559	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.106	chr1	-	4238	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	6	-1856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	418.191941577071	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066547	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029462_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045536_55046634_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.11	chr1	-	6105	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	322.69347932244	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066556	55024327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056037_55058392_55058560_55066497
ES.481.111	chr1	-	4213	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1858	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	494.970493999951	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTAATTTGTGTGTGTT	NA	False	NA	-8	True	AATAAA	-14	NA	55066541	55026189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040718_55042262_55042355_55042451_55042650_55044960_55045076_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.115	chr1	-	4328	26	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-30	-1860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	409.45312601078	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTAATTTGTGTGTG	NA	False	NA	-10	True	AATAAA	-12	NA	55066583	55026191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055287_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.116	chr1	-	4039	24	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	4	-1860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	321.660948197731	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTAATTTGTGTGTG	NA	False	NA	-10	True	AATAAA	-12	NA	55066636	55026191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027300_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.118	chr1	-	4236	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	323.478607827816	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTAATTTGTGTGTG	NA	False	NA	-10	True	AATAAA	-12	NA	55066552	55026191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045076_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.124	chr1	-	4233	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	322.470904695292	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCTAATTTGTGTGTG	NA	False	NA	-10	True	AATAAA	-12	NA	55066552	55026191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042640_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.129	chr1	-	3452	20	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1863	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	358.870288065911	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAATGCTAATTTGTGT	NA	False	NA	-13	True	AATAAA	-9	NA	55066541	55026194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.130	chr1	-	5747	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1863	intron_retention	FALSE	non_canonical	0	0	junction_11	414.328598457794	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAATGCTAATTTGTGT	NA	False	NA	-13	True	AATAAA	-9	NA	55066552	55026194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039540_55039795_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.131	chr1	-	4122	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	107	1966	-1	1818	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGGAGGGATATCATT	NA	False	NA	-112	True	AGTAAA	-36	NA	55066533	55026293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.132	chr1	-	5896	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-19	1653	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTTCAATCTGATGATA	NA	False	NA	NA	False	AATACA	-19	NA	55066659	55026458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.133	chr1	-	4097	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	-33	2131	-33	1653	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTTCAATCTGATGATA	NA	False	NA	NA	False	AATACA	-19	NA	55066673	55026458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.134	chr1	-	4010	22	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-152	1653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	432.521526340943	1512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTTCAATCTGATGATA	NA	False	NA	NA	False	AATACA	-19	NA	55054504	55026458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029462_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027
ES.481.138	chr1	-	3036	2	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-6379	-6893	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTACTGATTTGATCTGA	NA	False	NA	NA	False	NA	NA	NA	55038079	55035004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55036928_55036966
ES.481.139	chr1	-	3386	10	FSM	ENSMUSG00000025982.14	ENSMUST00000187500.7	3403	10	14	3	14	-3	multi-exon	FALSE	canonical	3	1240	junction_5	107.350930234545	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAGTTGCTTTTAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	55066609	55042312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.140	chr1	-	1483	11	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-10	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	432.372767412565	1362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAACAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55066542	55042333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051430_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.141	chr1	-	591	5	ISM	ENSMUSG00000025982.14	ENSMUST00000191303.2	600	7	4	2521	4	1028	5prime_fragment	FALSE	canonical	3	24	junction_1	646.597778762037	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTGTAGATATGTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	55066549	55053931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.142	chr1	-	1657	4	ISM	ENSMUSG00000025982.14	ENSMUST00000191303.2	600	7	6	2904	6	645	5prime_fragment	FALSE	canonical	3	1467	junction_2	34.4125300177453	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTTTAAAAAGCACG	NA	False	NA	NA	False	AATAGA	-20	NA	55066547	55054314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.143	chr1	-	1340	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55062188	55060848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55060800_55062200
ES.481.15	chr1	-	7730	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-5	1	intron_retention	FALSE	canonical	2	23	junction_21	316.247966067241	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATAGTATACCAGTT	NA	False	NA	-12	True	AATAAA	-14	NA	55066558	55024330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.19	chr1	-	6024	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	316.833848412697	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCATAGTATACCAGT	NA	False	NA	-13	True	AATAAA	-13	NA	55066658	55024331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037381_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.2	chr1	-	6199	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-28	7	combination_of_known_junctions	FALSE	canonical	2	24	junction_22	403.867602067806	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCAGTTCTTAATCTTA	NA	False	NA	-2	True	AATAAA	-24	NA	55066581	55024320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.20	chr1	-	6043	26	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_22	472.380229899601	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCATAGTATACCAGT	NA	False	NA	-13	True	AATAAA	-13	NA	55066552	55024331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.22	chr1	-	7779	24	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-1	intron_retention	FALSE	canonical	1	36	junction_3	319.073203018818	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTCATAGTATACCAG	NA	False	NA	-14	True	AATAAA	-12	NA	55066532	55024332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.23	chr1	-	5692	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	-18	521	-18	-517	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCTTTTTATTTAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	55066658	55024848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.24	chr1	-	7399	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-518	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCTTTTTATTTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	55066553	55024849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.25	chr1	-	5428	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	321.754683553929	1527	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGCTTTTTATTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	55066541	55024851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029591_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.26	chr1	-	6898	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-520	combination_of_known_junctions	FALSE	canonical	2	23	junction_22	403.995295022108	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTTGCTTTTTATTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	55066553	55024851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.29	chr1	-	5214	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	58	923	-29	-919	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGACTCTACCACCCT	NA	False	NA	NA	False	AATAAA	-21	NA	55066582	55025250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.3	chr1	-	10870	20	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-819	1	intron_retention	FALSE	canonical	2	1032	junction_2	157.956987728619	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTATACCAGTTCTTA	NA	False	NA	-8	True	AATAAA	-18	NA	55055171	55024326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641
ES.481.31	chr1	-	7079	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	4	-921	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTGACTCTACCACC	NA	False	NA	NA	False	AATAAA	-19	NA	55066636	55025252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.35	chr1	-	9966	22	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1784	intron_retention	FALSE	canonical	2	1032	junction_2	153.305262145044	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGGATTAATTTCAT	NA	False	NA	66	True	NA	NA	NA	55066552	55026115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.36	chr1	-	4664	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	-258	1789	-258	-1785	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGTGGATTAATTTCA	NA	False	NA	65	True	NA	NA	NA	55066898	55026116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.38	chr1	-	5939	24	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1850	intron_retention	FALSE	canonical	1	36	junction_3	319.073203018818	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066541	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.39	chr1	-	4361	26	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-28	-1850	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	477.153872037103	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066581	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058369_55058560_55066497
ES.481.4	chr1	-	7614	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	0	intron_retention	FALSE	canonical	2	43	junction_21	312.714923314972	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066552	55024327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.41	chr1	-	5844	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	4	-1850	intron_retention	FALSE	canonical	2	43	junction_21	312.714923314972	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066636	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.43	chr1	-	5875	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-1	-1850	intron_retention	FALSE	canonical	2	23	junction_21	316.247966067241	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066554	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.44	chr1	-	6185	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-31	-1850	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066671	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.45	chr1	-	5817	23	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1850	intron_retention	FALSE	canonical	0	0	junction_18	333.437840366731	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066541	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.47	chr1	-	4395	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	2	-1850	combination_of_known_junctions	FALSE	canonical	2	24	junction_22	403.867602067806	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTTTTTTGAAT	NA	False	NA	0	True	AATAAA	-22	NA	55066638	55026181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.49	chr1	-	4261	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	420.826862574015	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTGTTTTTTGAA	NA	False	NA	-1	True	AATAAA	-21	NA	55066552	55026182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042444_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053724_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.50	chr1	-	6908	23	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1851	intron_retention	FALSE	canonical	2	1032	junction_2	143.883762774271	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTGTTTTTTGAA	NA	False	NA	-1	True	AATAAA	-21	NA	55066552	55026182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.51	chr1	-	5680	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-27	-1852	combination_of_known_junctions	FALSE	canonical	2	23	junction_22	403.995295022108	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55066667	55026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.53	chr1	-	9818	23	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	1	-1852	intron_retention	FALSE	canonical	2	1032	junction_2	152.166475820518	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55066552	55026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.56	chr1	-	4271	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-10	-1852	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	323.454015278834	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55066563	55026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045552_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.6	chr1	-	8004	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	4	0	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066636	55024327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.60	chr1	-	6884	7	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-6316	-1852	intron_retention	TRUE	non_canonical	0	0	junction_6	576.857001344354	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55038016	55026183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55033621_55034524_55034646_55035975_55036088_55036170_55036928_55036966
ES.481.62	chr1	-	4239	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	-1853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	316.833848412697	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066535	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037190_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.64	chr1	-	5624	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	-1853	intron_retention	FALSE	canonical	1	36	junction_3	408.419563599193	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066535	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.66	chr1	-	3511	19	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	7519	-1853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	362.318153622537	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	5777	False	NA	-3	True	AATAAA	-19	NA	55046833	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042355_55042444_55042650_55044960_55045083_55045329_55045543_55046638
ES.481.69	chr1	-	4106	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	412.586354597435	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066556	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029591_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036350_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.7	chr1	-	7423	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_22	403.995295022108	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066554	55024327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.70	chr1	-	4029	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	19	-1853	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	319.636017001901	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066604	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.71	chr1	-	8062	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-1	-1853	intron_retention	FALSE	canonical	2	24	junction_21	409.977131391361	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066554	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.73	chr1	-	4267	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-10	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	321.165128758643	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066563	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039327_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.74	chr1	-	4232	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	10	-1853	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	323.070286040394	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066543	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040550_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.77	chr1	-	4093	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1853	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	327.171939904494	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066562	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55066497
ES.481.81	chr1	-	5401	8	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-5721	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	559.541758577353	1510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55037421	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029652_55029734_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196
ES.481.83	chr1	-	4211	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-7	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	411.262518806419	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066539	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033602_55034524_55034635_55035971_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.84	chr1	-	4049	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-1	-1853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	415.145655078499	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066554	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029462_55029533_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.85	chr1	-	5433	26	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-9	-1853	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_22	529.936901904368	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066541	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029619_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037415_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.86	chr1	-	3876	19	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	3025	-1853	intron_retention	FALSE	canonical	1	27	junction_8	356.931659952635	1514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	1283	False	NA	-3	True	AATAAA	-19	NA	55051327	55026184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037415_55038785_55038912_55039173_55039321_55039400_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260
ES.481.87	chr1	-	4218	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	-1854	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	418.084070409954	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTTGTGTGTGTTTTTT	NA	False	NA	-4	True	AATAAA	-18	NA	55066535	55026185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029462_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040061_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.91	chr1	-	4251	25	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-3	-1855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	316.833848412697	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTGTGTGTGTTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	55066556	55026186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036347_55037190_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.93	chr1	-	3557	21	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	8	-1856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	334.29087633377	1520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066545	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033612_55038821_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.94	chr1	-	4368	27	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-10	-1856	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_22	469.257428309525	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066563	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055287_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.98	chr1	-	8278	22	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	-7	-1856	intron_retention	FALSE	canonical	2	1032	junction_2	144.63813631332	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	55066560	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ES.481.99	chr1	-	2975	17	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	9318	-1856	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	384.119279773549	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGTGTGTGTTTT	7576	False	NA	-6	True	AATAAA	-16	NA	55045034	55026187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040707_55042327_55042365_55042451_55042650_55044960
ES.4810.1	chr11	+	173	1	Intergenic	novelGene_3718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTTG	7036	False	NA	NA	False	NA	NA	NA	52239346	52239519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_52239300_52239500
ES.4811.1	chr11	+	2905	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	-883	0	-883	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	4248	False	NA	30	True	AATAAA	-26	NA	52250803	52280224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.11	chr11	+	1825	9	NNC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-78	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1113.18292943029	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5328	False	NA	29	True	AATAAA	-25	NA	52251883	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267216_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.12	chr11	+	1920	10	FSM	ENSMUSG00000020402.12	ENSMUST00000125694.8	951	10	-78	-891	-78	-10	multi-exon	FALSE	canonical	0	0	junction_7	1380.41853556569	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCATCCTCTTGTT	5328	False	NA	20	True	AATAAA	-16	NA	52251883	52280214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52277193_52277299_52278242_52278301_52279258
ES.4811.15	chr11	+	3159	10	Fusion	ENSMUSG00000020402.12_ENSMUSG00000036275.14	novel	951	10	NA	NA	-77	5	multi-exon	FALSE	canonical	3	6	junction_8	1336.7206140402	1575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTAGTGTGTTCTTTA	5329	False	NA	NA	False	AATAAA	-21	NA	52251884	52299560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52293872_52294385_52297771
ES.4811.17	chr11	+	2674	8	NIC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-67	52	intron_retention	FALSE	canonical	3	3003	junction_1	204.751716247074	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTTAGTGTACCTTT	5339	False	NA	NA	False	TTTAAA	-23	NA	52251894	52279402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52278301_52279258
ES.4811.18	chr11	+	1719	10	NNC	ENSMUSG00000020402.12	novel	951	10	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1053.90480278502	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5339	False	NA	29	True	AATAAA	-25	NA	52251894	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258_52279838_52279931
ES.4811.19	chr11	+	1796	9	NNC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-56	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1117.5552559046	1432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5350	False	NA	29	True	AATAAA	-25	NA	52251905	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251974_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.2	chr11	+	1941	9	NNC	ENSMUSG00000020402.12	novel	891	8	NA	NA	-473	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1117.5552559046	1432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	4658	False	NA	29	True	AATAAA	-25	NA	52251213	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251427_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.22	chr11	+	1806	9	NNC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1117.5552559046	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCTTGTTGTTTTTG	5353	False	NA	27	True	AATAAA	-23	NA	52251908	52280221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251980_52265116_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.24	chr11	+	983	7	ISM	ENSMUSG00000020402.12	ENSMUST00000125694.8	951	10	-38	2541	-38	-2541	5prime_fragment	FALSE	canonical	3	3003	junction_1	188.543024856987	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACCTCCATGGCTTTTT	5368	False	NA	NA	False	NA	NA	NA	52251923	52276782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409
ES.4811.25	chr11	+	1417	5	NIC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-17	-21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1458.78586074173	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAATACTGAAACCTC	5389	False	NA	9	True	AATAAA	-5	NA	52251944	52280203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52251980_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.27	chr11	+	2969	9	NNC	ENSMUSG00000020402.12	novel	891	8	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1117.5552559046	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATCCTCTTGTTGTTTT	5428	False	NA	25	True	AATAAA	-21	NA	52251983	52280219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52253229_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.28	chr11	+	1944	9	NNC	ENSMUSG00000020402.12	novel	891	8	NA	NA	602	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1117.5552559046	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATCCTCTTGTTGT	6008	False	NA	22	True	AATAAA	-18	NA	52252563	52280216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52252787_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.3	chr11	+	4911	7	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	-257	8	-257	-8	intron_retention	FALSE	canonical	3	3003	junction_1	188.543024856987	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATCCTCTTGTTGT	4874	False	NA	22	True	AATAAA	-18	NA	52251429	52280216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409
ES.4811.30	chr11	+	3953	3	NIC	ENSMUSG00000020402.12	novel	891	8	NA	NA	2341	-10	intron_retention	FALSE	canonical	3	3154	junction_1	101	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTCATCCTCTTGTT	1681	False	NA	20	True	AATAAA	-16	NA	52267430	52280214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52267528_52274676_52276561_52278242
ES.4811.31	chr11	+	1396	4	ISM	ENSMUSG00000020402.12	ENSMUST00000020673.3	891	8	9586	-866	-3348	-8	3prime_fragment	FALSE	canonical	3	3141	junction_1	170.267110414457	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATCCTCTTGTTGT	8926	False	NA	22	True	AATAAA	-18	NA	52274675	52280216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.32	chr11	+	2517	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	-42	-3	-42	3	multi-exon	FALSE	canonical	3	140	junction_1	2	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGTTAGTGTGTTCTT	4516	False	NA	NA	False	AATAAA	-19	NA	52287212	52299558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52287431_52293872_52294385_52297771
ES.4811.33	chr11	+	833	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	-1	1635	-1	-1635	multi-exon	FALSE	canonical	3	140	junction_1	2	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCTTAGTATGCTGT	4557	False	NA	NA	False	NA	NA	NA	52287253	52297915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52287431_52293872_52294385_52297771
ES.4811.34	chr11	+	966	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	5	1496	5	-1496	multi-exon	FALSE	canonical	3	140	junction_1	2	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATATGGCTTCTTTTTTC	4563	False	NA	NA	False	NA	NA	NA	52287259	52298054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52287431_52293872_52294385_52297771
ES.4811.35	chr11	+	5762	3	NNC	ENSMUSG00000036275.14	novel	2472	3	NA	NA	27	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	70	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTCTGTTAGTGT	4585	False	NA	NA	False	AATAAA	-13	NA	52287281	52299552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52287431_52293872_52296690_52296756
ES.4811.36	chr11	+	1397	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	27	1043	27	-1043	multi-exon	FALSE	canonical	3	140	junction_1	2	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACATTTCCCCCCTC	4585	False	NA	NA	False	AATACA	-13	NA	52287281	52298507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52287431_52293872_52294385_52297771
ES.4811.37	chr11	+	4431	2	Fusion	ENSMUSG00000036275.14_ENSMUSG00000080951.2	novel	1373	2	NA	NA	-1383	2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTTCTGTTAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	52294759	52299552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_52296662_52297023
ES.4811.4	chr11	+	2069	10	NNC	ENSMUSG00000020402.12	novel	951	10	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	1380.00580603538	1432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5173	False	NA	29	True	AATAAA	-25	NA	52251728	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52277208_52277299_52278242_52278301_52279258
ES.4811.5	chr11	+	1113	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	159	750	-116	124	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAAGGATGACTCGGCT	5290	False	NA	NA	False	GATAAA	-18	NA	52251845	52279474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.6	chr11	+	3527	8	NIC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-98	0	intron_retention	FALSE	canonical	3	3003	junction_1	204.751716247074	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5308	False	NA	30	True	AATAAA	-26	NA	52251863	52280224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52278301_52279258
ES.4811.7	chr11	+	5987	6	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	177	3	-98	-3	intron_retention	FALSE	canonical	3	3003	junction_1	199.229114338241	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTCTTGTTGTTTTTG	5308	False	NA	27	True	AATAAA	-23	NA	52251863	52280221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676
ES.4811.8	chr11	+	1835	9	NNC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-95	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1114.85071169866	1432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5311	False	NA	29	True	AATAAA	-25	NA	52251866	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267522_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ES.4811.9	chr11	+	2566	9	NIC	ENSMUSG00000020402.12	novel	951	10	NA	NA	-82	-1	intron_retention	FALSE	canonical	3	8	junction_7	1104.09560699017	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCTTGTTGTTTTTGTT	5324	False	NA	29	True	AATAAA	-25	NA	52251879	52280223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52277299_52278242_52278301_52279258
ES.4812.1	chr11	-	4445	1	Antisense	novelGene_ENSMUSG00000020402.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTTTAAAAAGACTTA	9793	False	NA	NA	False	NA	NA	NA	52251794	52247349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_52247300_52251800
ES.4812.2	chr11	-	176	2	Antisense	novelGene_ENSMUSG00000020402.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	7221	False	NA	NA	False	NA	NA	NA	52277183	52247400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_52247495_52277101
ES.4812.3	chr11	-	629	2	Intergenic	novelGene_3719	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTCTATGCGTGTGAG	9380	False	NA	NA	False	AGTAAA	-36	NA	52249513	52248737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52249171_52249317
ES.4812.4	chr11	-	5046	1	Intergenic	novelGene_3720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTACTGCTGACAGC	6284	False	NA	NA	False	NA	NA	NA	52258711	52253665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52253700_52258700
ES.4812.5	chr11	-	177	1	Intergenic	novelGene_3721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGAAGCA	9030	False	NA	NA	False	NA	NA	NA	52274318	52274141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52274100_52274300
ES.4813.1	chr11	-	4449	1	Antisense	novelGene_ENSMUSG00000036275.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52294972	52290523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_52290500_52295000
ES.4814.1	chr11	-	209	1	Intergenic	novelGene_3722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCAGCCCTGAAAGTGCA	9950	False	NA	NA	False	AATAAA	-10	NA	52296767	52296558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52296600_52296800
ES.4815.1	chr11	+	170	1	Intergenic	novelGene_3723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGGGGGGTTTGGTTT	1059	False	NA	NA	False	NA	NA	NA	52301139	52301309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_52301100_52301300
ES.4816.1	chr11	-	172	1	Intergenic	novelGene_3724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTATAAAAAAAGTACTT	NA	False	NA	NA	False	NA	NA	NA	52316514	52316342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52316300_52316500
ES.4817.1	chr11	-	177	1	Intergenic	novelGene_3725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTTTTTAAAAAAA	3291	False	NA	NA	False	NA	NA	NA	52332795	52332618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52332600_52332800
ES.4818.1	chr11	+	1399	1	Intergenic	novelGene_3727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATTTGGTTATTGAC	NA	False	NA	NA	False	NA	NA	NA	52371201	52372600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_52371200_52372600
ES.4819.1	chr11	-	2301	2	Genic_Genomic	ENSMUSG00000081297.2	novel	596	1	NA	NA	-1643	1195	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGTAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	52371573	52368139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_52368313_52369445
ES.4819.2	chr11	-	1960	2	Genic_Genomic	ENSMUSG00000081297.2	novel	596	1	NA	NA	-1183	1195	multi-exon	FALSE	canonical	3	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGTAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	52371113	52368139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_52368313_52369326
ES.4819.3	chr11	-	3800	1	FSM	ENSMUSG00000081297.2	ENSMUST00000120089.2	596	1	-2010	-1194	-2010	1194	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGTTGTAGTTTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	52371940	52368140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_52368100_52371900
ES.4819.4	chr11	-	250	2	Intergenic	novelGene_3726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTTGTAGTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	52371112	52368141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52368313_52371033
ES.4819.5	chr11	-	1404	4	Genic_Genomic	ENSMUSG00000081297.2	novel	596	1	NA	NA	-1125	1192	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGCTTGTTGTAGTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	52371055	52368142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_52368313_52369445_52370586_52370669_52370742_52371033
ES.482.1	chr1	+	174	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCTATACAA	NA	False	NA	NA	False	NA	NA	NA	55081216	55081390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55081200_55081400
ES.4820.1	chr11	-	197	1	Intergenic	novelGene_3728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACTAAGA	NA	False	NA	NA	False	NA	NA	NA	52434907	52434710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52434700_52434900
ES.4821.1	chr11	-	182	1	Intergenic	novelGene_3729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTACAGAATAGAA	NA	False	NA	NA	False	NA	NA	NA	52565678	52565496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_52565500_52565700
ES.4822.1	chr11	-	2558	1	Antisense	novelGene_ENSMUSG00000036264.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATCACACCTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	53055057	53052499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_53052500_53055100
ES.4823.1	chr11	+	176	1	Intergenic	novelGene_3730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAAATCAGGG	NA	False	NA	NA	False	NA	NA	NA	53094918	53095094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53094900_53095100
ES.4824.1	chr11	+	197	1	Intergenic	novelGene_3731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAGTGA	NA	False	NA	NA	False	NA	NA	NA	53140284	53140481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53140300_53140500
ES.4825.1	chr11	+	6110	3	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCAAAAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	53172584	53181179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53174490_53174926_53177801_53179848
ES.4825.2	chr11	+	3427	4	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53172587	53181151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53174490_53174926_53175029_53177680_53177801_53179848
ES.4825.3	chr11	+	2659	1	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTCAGGCTAATTTT	NA	False	NA	NA	False	NA	NA	NA	53172587	53175246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53172600_53175200
ES.4825.4	chr11	+	8595	1	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAAAATTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	53172587	53181182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53172600_53181200
ES.4825.5	chr11	+	6558	2	Antisense	novelGene_ENSMUSG00000020361.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTCTCTCCGTAATG	NA	False	NA	NA	False	NA	NA	NA	53172587	53181193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53177801_53179848
ES.4825.6	chr11	+	154	1	Intergenic	novelGene_3732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53176430	53176584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53176400_53176600
ES.4826.1	chr11	+	2360	1	Intergenic	novelGene_3733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCACTTTCTACTGCA	NA	False	NA	NA	False	NA	NA	NA	53185515	53187875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53185500_53187900
ES.4827.1	chr11	-	4692	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-74	0	-74	0	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTTAATTTTCTTA	NA	False	NA	-1	True	AATAAA	-22	NA	53191358	53150640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.10	chr11	-	2814	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-6	1311	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	605.074640839999	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCAACTTTGTTCTG	NA	False	NA	-39	True	ATTAAA	-21	NA	53191244	53152395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153250_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174361_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.12	chr11	-	2710	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-7	1311	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_17	465.90411573813	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCAACTTTGTTCTG	NA	False	NA	-39	True	ATTAAA	-21	NA	53191245	53152395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179878_53183083_53183142_53190886
ES.4827.13	chr11	-	2722	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	15	1311	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	450.318741402278	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCAACTTTGTTCTG	NA	False	NA	-39	True	ATTAAA	-21	NA	53191269	53152395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.15	chr11	-	2962	20	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	15	1311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	597.847093172163	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTCAACTTTGTTCTG	NA	False	NA	-39	True	ATTAAA	-21	NA	53191269	53152395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53182534_53182649_53183083_53183142_53190886
ES.4827.19	chr11	-	2681	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-7	1309	combination_of_known_splicesites	FALSE	canonical	2	144	junction_16	449.102234028062	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	-41	True	ATTAAA	-19	NA	53191245	53152397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53183083_53183142_53190886
ES.4827.2	chr11	-	4632	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	467.598134547283	1436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTTAATTTTCTTA	NA	False	NA	-1	True	AATAAA	-22	NA	53191304	53150640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174932_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.20	chr11	-	3329	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-20	1309	intron_retention	FALSE	canonical	3	1487	junction_12	204.47404045011	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTGTCAACTTTGTTC	NA	False	NA	-41	True	ATTAAA	-19	NA	53191304	53152397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.22	chr11	-	2814	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-7	1308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	467.650655727616	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191245	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162941_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.23	chr11	-	2743	20	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	14	1308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	455.203172196591	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191270	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886_53191102_53191204
ES.4827.24	chr11	-	3759	18	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-7	1308	intron_retention	FALSE	canonical	0	0	junction_17	481.164166389499	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191245	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190882
ES.4827.25	chr11	-	2813	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-5	1308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	459.31441126429	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191243	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159322_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.26	chr11	-	4739	12	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	22160	1758	-11056	1308	3prime_fragment	FALSE	canonical	3	1682	junction_11	202.5714035932	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53169124	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969
ES.4827.27	chr11	-	3649	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-7	1308	intron_retention	FALSE	canonical	3	1487	junction_12	211.634796754295	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191291	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.28	chr11	-	2810	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-5	1308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	464.24361686777	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191243	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153244_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.30	chr11	-	3844	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-1	1308	intron_retention	FALSE	canonical	0	0	junction_5	602.289541132855	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191239	53152398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53156877_53157792_53157946_53158449_53158697_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.31	chr11	-	2852	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-4	1307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	467.614899724596	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGTTGTCAACTTTGT	NA	False	NA	-43	True	ATTAAA	-17	NA	53191288	53152399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162851_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.38	chr11	-	2670	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-4	1306	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	466.589573658599	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTTGTCAACTTTG	NA	False	NA	-44	True	ATTAAA	-16	NA	53191288	53152400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171486_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.4	chr11	-	2800	15	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-16341	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	527.324189678805	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAATGGTTTTCTTAA	NA	False	NA	-9	True	AATAAA	-14	NA	53174409	53150648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53150814_53151723_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355
ES.4827.40	chr11	-	4572	17	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	2	1306	intron_retention	FALSE	canonical	3	1487	junction_11	215.614447205539	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTTGTCAACTTTG	NA	False	NA	-44	True	ATTAAA	-16	NA	53191282	53152400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.41	chr11	-	2822	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-22	1306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	466.964101641895	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTTGTCAACTTTG	NA	False	NA	-44	True	ATTAAA	-16	NA	53191260	53152400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160685_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.43	chr11	-	2738	20	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	24	1304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	455.203172196591	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAAGTTGTCAACTT	NA	False	NA	-46	True	ATTAAA	-14	NA	53191214	53152402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886_53190993_53191040
ES.4827.44	chr11	-	2635	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-72	1303	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	466.843237098591	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191356	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53191178
ES.4827.45	chr11	-	2851	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-15	1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	461.390758575381	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191299	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152609_53153075_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.46	chr11	-	2818	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	21	1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	467.666881154091	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191263	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190902
ES.4827.47	chr11	-	3114	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-268	1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	577.841142358753	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191552	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156871_53157792_53157946_53159316_53159410_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.48	chr11	-	3682	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-76	1303	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	458.485213892471	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191360	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53158697_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.5	chr11	-	3196	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	-298	1720	-298	1346	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATACTGGAGATTTC	NA	False	NA	-4	True	TATAAA	-41	NA	53191582	53152360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.50	chr11	-	1177	2	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	37256	1763	4040	1303	intron_retention	FALSE	canonical	3	2050	junction_1	0	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53154028	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53152643_53153090
ES.4827.51	chr11	-	3133	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-286	1303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	466.852995209201	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191570	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175019_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.54	chr11	-	4726	17	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	7	1303	intron_retention	FALSE	canonical	0	0	junction_4	461.807078057223	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191277	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53156871_53157792_53157946_53159316_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.57	chr11	-	2871	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-24	1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	611.834443131857	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191308	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159407_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166045_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.58	chr11	-	2869	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-21	1303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	461.390758575381	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTAAGTTGTCAACT	NA	False	NA	-47	True	ATTAAA	-13	NA	53191305	53152403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153097_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.59	chr11	-	2767	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-21	1302	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	478.110373670939	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTTAAGTTGTCAAC	NA	False	NA	-48	True	ATTAAA	-12	NA	53191305	53152404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.6	chr11	-	3953	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	20	1319	intron_retention	FALSE	canonical	3	1487	junction_12	211.416772993805	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTTCTGAATATCAA	NA	False	NA	-31	True	ATTAAA	-29	NA	53191264	53152387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.61	chr11	-	5174	17	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-15	1302	intron_retention	FALSE	canonical	3	1487	junction_11	205.045564677098	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTTAAGTTGTCAAC	NA	False	NA	-48	True	ATTAAA	-12	NA	53191299	53152404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53159413_53160514_53160697_53161772_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.62	chr11	-	2574	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-21	1302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	466.964101641895	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTTAAGTTGTCAAC	NA	False	NA	-48	True	ATTAAA	-12	NA	53191259	53152404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160551_53161881_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.63	chr11	-	2855	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	3	1302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	465.582169088164	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTTAAGTTGTCAAC	NA	False	NA	-48	True	ATTAAA	-12	NA	53191281	53152404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153825_53155854_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.64	chr11	-	2723	20	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	20	1302	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_19	455.203172196591	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTTAAGTTGTCAAC	NA	False	NA	-48	True	ATTAAA	-12	NA	53191218	53152404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886_53191025_53191089
ES.4827.69	chr11	-	3036	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-20	1301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	467.666881154091	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTAAGTTGTCAA	NA	False	NA	-49	True	ATTAAA	-11	NA	53191304	53152405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190723
ES.4827.71	chr11	-	2808	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-24	1293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	467.259372284446	1431	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTATTATAAAGCTTTAA	NA	False	NA	-57	True	ATTAAA	-3	NA	53191308	53152413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156811_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.72	chr11	-	5506	14	NNC	ENSMUSG00000020361.14	novel	3075	16	NA	NA	-8	17	intron_retention	TRUE	non_canonical	0	0	junction_1	490.674791974572	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTCTGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	53191246	53155056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53157143_53157368_53157946_53159316_53159413_53160514_53160697_53161772_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.73	chr11	-	3141	16	FSM	ENSMUSG00000020361.14	ENSMUST00000151854.2	3075	16	-49	-17	-3	17	multi-exon	FALSE	canonical	3	1487	junction_10	212.016183868643	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTCTGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	53191287	53155056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.74	chr11	-	3941	15	NIC	ENSMUSG00000020361.14	novel	3075	16	NA	NA	-21	17	intron_retention	FALSE	canonical	3	1487	junction_9	219.419747311412	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTCTGGAAAATG	NA	False	NA	NA	False	NA	NA	NA	53191305	53155056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.75	chr11	-	1044	7	ISM	ENSMUSG00000020361.14	ENSMUST00000151854.2	3075	16	-25	16355	21	-16355	5prime_fragment	FALSE	canonical	3	1487	junction_1	129.928185292235	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCGTGCTTTATTACG	NA	False	NA	NA	False	CATAAA	-5	NA	53191263	53171428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ES.4827.76	chr11	-	1208	1	Genic_Genomic	ENSMUSG00000020361.14	novel	NA	NA	NA	NA	-74	-35077	mono-exon	FALSE	NA	NA	NA	NA	NA	1299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCACTCAGAGCTTGCTG	NA	False	NA	NA	False	NA	NA	NA	53191358	53190150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_53190200_53191400
ES.4828.1	chr11	+	175	1	Intergenic	novelGene_3734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTT	6478	False	NA	NA	False	NA	NA	NA	53194086	53194261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53194100_53194300
ES.4829.1	chr11	-	262	1	Intergenic	novelGene_3735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACAATTGAACTATGAT	NA	False	NA	NA	False	NA	NA	NA	53201429	53201167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53201200_53201400
ES.483.1	chr1	+	1719	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	13	1	13	-1	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGTTATTTAAATCTT	3572	False	NA	21	True	AATAAA	-27	NA	55091941	55111860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ES.483.2	chr1	+	4807	4	NIC	ENSMUSG00000025981.14	novel	1733	5	NA	NA	46	-3	intron_retention	FALSE	canonical	3	135	junction_3	25.8499946271217	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTGGTTATTTAAATC	3605	False	NA	19	True	AATAAA	-25	NA	55091974	55111858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55092150_55100433_55100584_55103339_55106758_55110794
ES.483.4	chr1	+	5705	1	FSM	ENSMUSG00000025981.14	ENSMUST00000185474.2	1225	1	-49	-4431	-49	-3233	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3609	False	NA	NA	False	NA	NA	NA	55091978	55097683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55092000_55097700
ES.483.5	chr1	+	1255	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	64	414	-35	335	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTAGCACTTTGGGTA	3623	False	NA	NA	False	ATTAAA	-26	NA	55091992	55111447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ES.483.6	chr1	+	4636	3	NIC	ENSMUSG00000025981.14	novel	1733	5	NA	NA	-30	-1	intron_retention	FALSE	canonical	2	3	junction_1	66	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGGTTATTTAAATCTT	3628	False	NA	21	True	AATAAA	-27	NA	55091997	55111860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55092150_55103339_55106758_55110794
ES.483.7	chr1	+	829	5	NNC	ENSMUSG00000025981.14	novel	1733	5	NA	NA	-12	-1533	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	78.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAACTTTCTGATTTTGA	3646	False	NA	NA	False	ATTAAA	-24	NA	55092015	55109579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55109329
ES.4830.1	chr11	-	209	1	Intergenic	novelGene_3736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	53204148	53203939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53203900_53204100
ES.4831.1	chr11	+	171	1	Intergenic	novelGene_3737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGGCCCAAGTGAT	8508	False	NA	NA	False	NA	NA	NA	53209168	53209339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53209200_53209300
ES.4832.1	chr11	-	173	1	Intergenic	novelGene_3738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTGAGACCAA	NA	False	NA	NA	False	NA	NA	NA	53209571	53209398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53209400_53209600
ES.4833.1	chr11	+	1977	5	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	-2221	20	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	112.364084564419	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTGTTGTTGTTTT	NA	False	NA	34	True	NA	NA	NA	53213284	53224148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53213790_53215320_53215569_53218095_53218255_53221513_53221559_53223128
ES.4833.10	chr11	+	3107	2	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	12	2977	12	-2155	5prime_fragment	FALSE	canonical	3	244	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAATGGCCATGTGTA	NA	False	NA	NA	False	NA	NA	NA	53215517	53221151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53215569_53218095
ES.4833.11	chr11	+	1532	5	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	13	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	137.468860110208	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTGTATCAGAAAATTC	NA	False	NA	21	True	AATAAA	-15	NA	53215518	53224056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222599_53222902
ES.4833.12	chr11	+	1200	3	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	15	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	118	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGAATGATGTAAGT	NA	False	NA	7	True	TATAAA	-20	NA	53215520	53224121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53215569_53218095_53218255_53223128
ES.4833.2	chr11	+	1223	4	NNC	ENSMUSG00000018239.10	novel	375	4	NA	NA	-1796	-61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	130.415575075304	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTCTGATTTTTCTA	NA	False	NA	32	True	AATAAA	-26	NA	53213709	53224067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53213790_53218095_53218255_53221513_53221559_53223128
ES.4833.3	chr11	+	218	1	Intergenic	novelGene_3739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	53214736	53214954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53214700_53215000
ES.4833.4	chr11	+	675	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	5	587	5	235	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTATTGTATAGAATA	NA	False	NA	1	True	AATAAA	-19	NA	53215510	53223541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
ES.4833.5	chr11	+	1907	4	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	5	-9	intron_retention	FALSE	canonical	2	6	junction_3	128.998708003866	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATTGGAATGATGTAA	NA	False	NA	5	True	TATAAA	-18	NA	53215510	53224119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474
ES.4833.6	chr11	+	2821	3	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	9	7	9	-7	intron_retention	FALSE	canonical	3	244	junction_1	30.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGAATGATGTAAGT	NA	False	NA	7	True	TATAAA	-20	NA	53215514	53224121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53215569_53218095_53218255_53221513
ES.4833.7	chr11	+	1316	5	NNC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	135.234980681775	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAAGTTTCAAGTTTT	NA	False	NA	17	True	TATAAA	-30	NA	53215514	53224131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222530_53223128
ES.4833.9	chr11	+	1372	5	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	12	-7	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	136.466799991793	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGAATGATGTAAGT	NA	False	NA	7	True	TATAAA	-20	NA	53215517	53224121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53215569_53218095_53218255_53221513_53221559_53222474_53222599_53223128
ES.4834.1	chr11	-	178	1	Intergenic	novelGene_3740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	53217792	53217614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53217600_53217800
ES.4835.1	chr11	-	1452	3	Antisense	novelGene_ENSMUSG00000018239.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCTCTGTGGTAGGA	NA	False	NA	NA	False	NA	NA	NA	53226592	53219566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_53220691_53223155_53223380_53226488
ES.4835.2	chr11	-	1453	1	Intergenic	novelGene_3741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53226710	53225257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53225300_53226700
ES.4836.1	chr11	-	218	1	Intergenic	novelGene_3742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTAGATTGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	53229125	53228907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53228900_53229100
ES.4837.1	chr11	-	250	1	Intergenic	novelGene_3743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	53232837	53232587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53232600_53232800
ES.4838.1	chr11	-	348	1	Intergenic	novelGene_3744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAATAATAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	53233210	53232862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53232900_53233200
ES.4838.2	chr11	-	178	1	Intergenic	novelGene_3745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCACTGT	NA	False	NA	NA	False	NA	NA	NA	53233210	53233032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53233000_53233200
ES.4839.1	chr11	+	241	1	Intergenic	novelGene_3746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAATCACTAACTTGA	NA	False	NA	NA	False	NA	NA	NA	53238564	53238805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53238600_53238800
ES.484.1	chr1	-	1856	1	FSM	ENSMUSG00000103030.2	ENSMUST00000193614.2	1794	1	-60	-2	-60	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTGCTTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	55092331	55090475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55090500_55092300
ES.4840.1	chr11	+	9836	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-323	586	-323	-586	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCACTGTGCTCTCGCT	NA	False	NA	42	True	AATAAA	-29	NA	53241336	53312071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.10	chr11	+	9479	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-86	706	-86	-706	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTGTAAAACTCTT	NA	False	NA	18	True	ATTAAA	-25	NA	53241573	53311951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.12	chr11	+	4481	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-76	5694	-76	303	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTCTGGTTTAGTATG	NA	False	NA	NA	False	TTTAAA	-38	NA	53241583	53306963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.13	chr11	+	9494	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-76	-594	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTTGCATGCACTGTG	NA	False	NA	34	True	AATAAA	-21	NA	53241583	53312063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.14	chr11	+	3138	15	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-74	13911	-74	-1611	5prime_fragment	FALSE	canonical	3	75	junction_1	16.7443258741459	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAACACAATGCAGATGC	NA	False	NA	NA	False	NA	NA	NA	53241585	53298746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706
ES.4840.15	chr11	+	7434	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-72	-2650	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCCCTTCTGTAGTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	53241587	53310007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.16	chr11	+	9673	22	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-72	-590	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.2330464169275	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATGCACTGTGCTCT	NA	False	NA	38	True	AATAAA	-25	NA	53241587	53312067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.17	chr11	+	4719	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-65	547	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.3912750504591	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTTTCTGAAGGCTGC	NA	False	NA	NA	False	AGTAAA	-19	NA	53241594	53307207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.2	chr11	+	9590	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-284	-706	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATTTGTAAAACTCTT	NA	False	NA	18	True	ATTAAA	-25	NA	53241375	53311951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.20	chr11	+	4591	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-60	456	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	27.3047157099282	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATGAGTTTGTTAAAA	NA	False	NA	NA	False	CATAAA	-11	NA	53241599	53307116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289090_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.21	chr11	+	4798	22	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-57	547	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.2330464169275	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTTTCTGAAGGCTGC	NA	False	NA	NA	False	AGTAAA	-19	NA	53241602	53307207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.23	chr11	+	5531	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-55	498	intron_retention	FALSE	canonical	3	75	junction_1	17.5598698876419	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTGACACTTGATTGA	NA	False	NA	NA	False	NA	NA	NA	53241604	53307158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53302884_53306214
ES.4840.24	chr11	+	3863	20	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-55	9622	-55	2678	5prime_fragment	FALSE	canonical	3	75	junction_1	17.7790377362073	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGACTAGATGTGGTT	NA	False	NA	NA	False	NA	NA	NA	53241604	53303035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662
ES.4840.25	chr11	+	4743	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-55	547	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	26.6482175764159	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTTTCTGAAGGCTGC	NA	False	NA	NA	False	AGTAAA	-19	NA	53241604	53307207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287460_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.26	chr11	+	9521	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-42	-593	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	27.3047157099282	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCATGCACTGTGC	NA	False	NA	35	True	AATAAA	-22	NA	53241617	53312064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289090_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.27	chr11	+	4592	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-40	537	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAGTGATCCAGTTTC	NA	False	NA	NA	False	AGTAAA	-9	NA	53241619	53307197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.28	chr11	+	4888	20	Fusion	ENSMUSG00000049470.14_ENSMUSG00000018238.7	novel	10099	21	NA	NA	-37	-7	multi-exon	FALSE	canonical	0	0	junction_19	34.7682473663938	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAATTGTGTGTGTTCTA	NA	False	NA	NA	False	AATAAA	-11	NA	53241622	53328724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53327442
ES.4840.29	chr11	+	4198	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-37	5938	-37	59	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTAATGTAGGCATT	NA	False	NA	NA	False	TATAAA	-22	NA	53241622	53306719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.3	chr11	+	9648	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-105	-595	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	26.6482175764159	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGTTTGCATGCACTGT	NA	False	NA	33	True	AATAAA	-20	NA	53241554	53312062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287460_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.32	chr11	+	4594	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	210	-599	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.960360120555	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTACGTTTGCATGCA	NA	False	NA	29	True	AATAAA	-16	NA	53241869	53312058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266414_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53310911
ES.4840.33	chr11	+	3916	22	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	246	-32	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.2330464169275	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTCATTTTTTTT	NA	False	NA	NA	False	AGTAAA	-5	NA	53241905	53306628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.34	chr11	+	577	1	Intergenic	novelGene_3751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53254820	53255397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53254800_53255400
ES.4840.35	chr11	+	4240	19	Fusion	ENSMUSG00000049470.14_ENSMUSG00000018238.7	novel	10099	21	NA	NA	-26	-5	multi-exon	FALSE	canonical	0	0	junction_18	29.022979401387	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGTGTGTGTTCTATT	NA	False	NA	NA	False	AATAAA	-13	NA	53263380	53328726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53327442
ES.4840.36	chr11	+	1748	1	Intergenic	novelGene_3755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCACCAATGTGATTAATAA	5540	False	NA	NA	False	AAAACA	-15	NA	53272595	53274343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53272600_53274300
ES.4840.37	chr11	+	7906	13	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	46997	721	-6717	-721	3prime_fragment	FALSE	canonical	3	95	junction_6	11.2110436623893	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGGGTATCACATTTCA	NA	False	NA	3	True	ATTAAA	-10	NA	53288656	53311936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.38	chr11	+	7996	12	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	47402	593	-6312	-593	3prime_fragment	FALSE	canonical	3	95	junction_5	10.0181653192407	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTGCATGCACTGTGC	NA	False	NA	35	True	AATAAA	-22	NA	53289061	53312064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.4	chr11	+	7697	24	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-99	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	41.5259501620614	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTACGTTTGCATGCACT	NA	False	NA	31	True	AATAAA	-18	NA	53241560	53312060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214_53308862_53310113_53310168_53310911
ES.4840.41	chr11	+	6286	5	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	57559	595	-2302	-595	3prime_fragment	FALSE	canonical	3	114	junction_2	5.35607132140714	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGTTTGCATGCACTGT	NA	False	NA	33	True	AATAAA	-20	NA	53299218	53312062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.42	chr11	+	6114	3	FSM	ENSMUSG00000049470.14	ENSMUST00000129019.2	933	3	220	-5401	220	-596	multi-exon	FALSE	canonical	3	114	junction_2	3	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGTTTGCATGCACTG	921	False	NA	32	True	AATAAA	-19	NA	53301740	53312061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53301787_53302662_53302884_53306214
ES.4840.43	chr11	+	5961	1	ISM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	64917	120	5056	-120	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTATTGGTTCTTT	5757	False	NA	NA	False	ATTAAA	-38	NA	53306576	53312537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53306600_53312500
ES.4840.44	chr11	+	2919	2	FSM	ENSMUSG00000018238.7	ENSMUST00000018382.7	1793	2	-1127	1	-670	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGTTCTATTGAAA	7935	False	NA	NA	False	AATAAA	-17	NA	53322998	53328730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53324630_53327442
ES.4840.7	chr11	+	4736	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	-86	5449	-86	548	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTCTGAAGGCTGCA	NA	False	NA	NA	False	AGTAAA	-20	NA	53241573	53307208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.8	chr11	+	9446	21	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-86	-712	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	27.3047157099282	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACATTTCAATTTGTAAA	NA	False	NA	12	True	ATTAAA	-19	NA	53241573	53311945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289090_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ES.4840.9	chr11	+	3894	19	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-86	2677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.7843131601946	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTATGACTAGATGTGGT	NA	False	NA	NA	False	NA	NA	NA	53241573	53303034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53241957_53259486_53259614_53263104_53263927_53271412_53271500_53280581_53280623_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662
ES.4841.1	chr11	-	231	1	Intergenic	novelGene_3747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGATTTTTATGAAAGG	NA	False	NA	NA	False	NA	NA	NA	53244518	53244287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53244300_53244500
ES.4842.1	chr11	-	160	1	Intergenic	novelGene_3748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAATAATAAAAATAA	8423	False	NA	NA	False	NA	NA	NA	53247211	53247051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53247100_53247200
ES.4843.1	chr11	-	232	1	Intergenic	novelGene_3749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACATTAAAAAAAAAA	7979	False	NA	NA	False	NA	NA	NA	53247655	53247423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53247400_53247700
ES.4844.1	chr11	-	7218	1	Intergenic	novelGene_3750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTAAATTCAAGTGTGT	9171	False	NA	NA	False	NA	NA	NA	53257831	53250613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53250600_53257800
ES.4844.2	chr11	-	177	1	Intergenic	novelGene_3752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAAAACAAAACAAAA	2678	False	NA	NA	False	NA	NA	NA	53255072	53254895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53254900_53255100
ES.4845.1	chr11	-	355	1	Intergenic	novelGene_3753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAATTTTA	9066	False	NA	NA	False	NA	NA	NA	53260729	53260374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53260400_53260700
ES.4846.1	chr11	-	206	1	Intergenic	novelGene_3754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTACAACTAATATCACTG	2435	False	NA	NA	False	ATTAAA	-5	NA	53269588	53269382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53269400_53269600
ES.4847.1	chr11	-	170	1	Intergenic	novelGene_3756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	53281175	53281005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53281000_53281200
ES.4848.1	chr11	-	757	4	Fusion	ENSMUSG00000044894.15_ENSMUSG00000036216.6	novel	531	3	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_2	2691.48414241825	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTGGCAGTCTGGAA	2961	False	NA	NA	False	ATTAAA	-12	NA	53321640	53313010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_53313277_53313576_53313714_53319901_53319978_53321362
ES.4848.10	chr11	-	1304	1	NIC	ENSMUSG00000044894.15	novel	1521	2	NA	NA	76	-495	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGGAAAAAAAAAAAA	3023	False	NA	NA	False	NA	NA	NA	53321578	53320274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53320300_53321600
ES.4848.2	chr11	-	3669	1	Genic_Genomic	ENSMUSG00000044894.15	novel	NA	NA	NA	NA	2	761	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTAACTTCTCTTAGC	2945	False	NA	NA	False	NA	NA	NA	53321656	53317987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_53318000_53321700
ES.4848.4	chr11	-	2153	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	3	-1751	3	720	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2950	False	NA	NA	False	NA	NA	NA	53321651	53318028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53319978_53321362_53321530_53321614
ES.4848.5	chr11	-	513	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	-17	1025	-13	6	multi-exon	FALSE	canonical	3	5710	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTGCTTAGTTTG	2930	False	NA	-2	True	AATAAA	-23	NA	53321671	53319773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53319978_53321362
ES.4848.6	chr11	-	415	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	-5	-5	-1	5	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGTGTGCTTAGTTT	2942	False	NA	-3	True	AATAAA	-22	NA	53321659	53319774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53319978_53321362_53321530_53321614
ES.4848.7	chr11	-	333	2	FSM	ENSMUSG00000044894.15	ENSMUST00000156503.2	375	2	42	0	38	0	multi-exon	FALSE	canonical	0	0	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2985	False	NA	-8	True	AATAAA	-17	NA	53321616	53319779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53319978_53321481
ES.4848.8	chr11	-	1881	1	Genic_Genomic	ENSMUSG00000044894.15	novel	NA	NA	NA	NA	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2941	False	NA	-8	True	AATAAA	-17	NA	53321660	53319779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_53319800_53321700
ES.4848.9	chr11	-	395	3	NNC	ENSMUSG00000044894.15	novel	405	3	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	195	junction_2	2757.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGACTTTGTGTGC	2961	False	NA	-10	True	AATAAA	-15	NA	53321640	53319781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53319978_53321362_53321530_53321608
ES.4849.1	chr11	-	226	1	Intergenic	novelGene_3757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGGAAAGCAAACGAG	NA	False	NA	NA	False	NA	NA	NA	53325617	53325391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53325400_53325600
ES.485.1	chr1	+	983	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	-195	-14	-195	14	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTAAGGTCGTTTTCT	NA	False	NA	27	True	AATAAA	-28	NA	55127095	55130480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ES.485.3	chr1	+	2761	2	NIC	ENSMUSG00000073676.5	novel	774	4	NA	NA	-33	1	intron_retention	FALSE	canonical	3	8111	junction_1	0	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTTTGGTAATTT	NA	False	NA	14	True	AATAAA	-15	NA	55127439	55130467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55129962_55130228
ES.485.4	chr1	+	2993	1	NIC	ENSMUSG00000073676.5	novel	774	4	NA	NA	-5	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGACAGTCTTTG	NA	False	NA	7	True	AATAAA	-8	NA	55127467	55130460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55127500_55130500
ES.485.5	chr1	+	582	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	2	57	junction_3	3750.75364278819	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTGGTAATTTAAGGT	NA	False	NA	19	True	AATAAA	-20	NA	55127471	55130472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55127572_55128209_55128375_55129871_55129962_55130245
ES.485.6	chr1	+	505	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	1	-77	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3643.71882681539	651	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACAGCCATTGTCTC	NA	False	NA	25	True	AATAAA	-13	NA	55127473	55130389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55127572_55128218_55128375_55129871_55129962_55130228
ES.4850.1	chr11	+	3757	8	FSM	ENSMUSG00000018387.13	ENSMUST00000109013.9	3312	8	33	-478	-8	478	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCATTGCCTGCAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	53348064	53359071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53348169_53354049_53355021_53355101_53355158_53355946_53356136_53356322_53356872_53356950_53357084_53357204_53357478_53357589
ES.4851.1	chr11	+	2136	1	FSM	ENSMUSG00000054450.2	ENSMUST00000067523.2	932	1	-1923	719	-1923	-719	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTCCTTGCACTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	53369069	53371205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53369100_53371200
ES.4852.1	chr11	-	3630	1	FSM	ENSMUSG00000044352.7	ENSMUST00000104955.4	3702	1	69	3	69	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCTTGTGTGGAGTGCCC	NA	False	NA	NA	False	AATAAA	-18	NA	53371032	53367402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53367400_53371000
ES.4853.1	chr11	-	178	1	Intergenic	novelGene_3758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAACAAT	NA	False	NA	NA	False	NA	NA	NA	53375762	53375584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53375600_53375800
ES.4854.1	chr11	+	4826	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	-261	-2	-207	2	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGGTGTCATTTTTGG	NA	False	NA	19	True	ATTAAA	-21	NA	53410365	53434925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.11	chr11	+	4293	10	NNC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-29	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.2766184179422	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTTCATGGTGTCAT	NA	False	NA	13	True	ATTAAA	-15	NA	53410705	53434919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53410867_53422822_53422944_53425259_53425449_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ES.4854.12	chr11	+	2112	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	135	2189	-27	8	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGGGACTTCTTTAT	NA	False	NA	8	True	AATAAA	-15	NA	53410707	53432733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ES.4854.13	chr11	+	2286	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	91	2186	-17	12	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGACTTCTTTATGGAC	NA	False	NA	12	True	AATAAA	-19	NA	53410717	53432737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.16	chr11	+	4479	10	NNC	ENSMUSG00000018398.19	novel	737	5	NA	NA	241	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.3049484375916	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410994	53434921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53411153_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.17	chr11	+	1642	9	NNC	ENSMUSG00000018398.19	novel	1742	10	NA	NA	-8	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.2196636651691	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGGGACTTCTTTAT	NA	False	NA	8	True	AATAAA	-15	NA	53422869	53432733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53422944_53425259_53425457_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432301
ES.4854.18	chr11	+	4745	5	ISM	ENSMUSG00000018398.19	ENSMUST00000120878.9	1806	10	16038	-8	3895	8	intron_retention	FALSE	canonical	3	73	junction_4	15.4434452114805	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGGGACTTCTTTAT	NA	False	NA	8	True	AATAAA	-15	NA	53426772	53432733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551
ES.4854.19	chr11	+	4086	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-8	1060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.820514362377	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGGACATTGTTCATT	911	False	NA	6	True	ATTAAA	-22	NA	53458197	53493854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492680_53492823
ES.4854.2	chr11	+	4486	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	-46	-4	-46	3	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGTCATTTTTGGG	NA	False	NA	20	True	ATTAAA	-22	NA	53410526	53434926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ES.4854.20	chr11	+	4218	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	-8	-1920	-8	1058	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGGACATTGTTCA	911	False	NA	4	True	ATTAAA	-20	NA	53458197	53493852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.21	chr11	+	3189	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	-4	-895	-4	33	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGACCAGTCTCATTTT	915	False	NA	NA	False	NA	NA	NA	53458201	53492827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.22	chr11	+	4072	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-2	1057	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	29.9264380690675	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGGTGGACATTGTTC	917	False	NA	3	True	ATTAAA	-19	NA	53458203	53493851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474190_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492694_53492838
ES.4854.23	chr11	+	2281	17	NNC	ENSMUSG00000018395.20	novel	2257	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.5472017559569	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	917	False	NA	18	True	AATAAA	-15	NA	53458203	53491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484208_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.24	chr11	+	3175	17	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-2	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.5472017559569	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAAATAA	917	False	NA	NA	False	NA	NA	NA	53458203	53492805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.25	chr11	+	2299	17	NNC	ENSMUSG00000018395.20	novel	2257	18	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.5472017559569	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	917	False	NA	18	True	AATAAA	-15	NA	53458203	53491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.26	chr11	+	5301	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-2	2281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.820514362377	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTATTCATTTATATT	917	False	NA	20	True	AATAAA	-30	NA	53458203	53495075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492680_53492823
ES.4854.28	chr11	+	4061	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	2	1056	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	25.0891834866677	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATCAGGTGGACATTGTT	921	False	NA	2	True	ATTAAA	-18	NA	53458207	53493850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492694_53492838
ES.4854.29	chr11	+	3044	17	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	2	-116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.5472017559569	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGAGACCAGGGGTT	921	False	NA	NA	False	NA	NA	NA	53458207	53492678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.3	chr11	+	4622	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTTCATGGTGTCATTT	NA	False	NA	15	True	ATTAAA	-17	NA	53410559	53434921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.30	chr11	+	2279	17	NNC	ENSMUSG00000018395.20	novel	2290	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.5926625226841	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAGAGAACTCCTTAAT	922	False	NA	21	True	AATAAA	-18	NA	53458208	53491932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485670_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.31	chr11	+	3217	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-2	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	30.1007535341194	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	935	False	NA	NA	False	NA	NA	NA	53458221	53492768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477663_53477758_53481543_53481653_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.33	chr11	+	3112	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	3	125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	25.0891834866677	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACTCTTCTGGATTT	940	False	NA	NA	False	TATAAA	-11	NA	53458226	53492919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492680_53492823
ES.4854.34	chr11	+	5282	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	4	2267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	29.9981544991755	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTTTTAAAACATCTT	941	False	NA	6	True	AATAAA	-16	NA	53458227	53495061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488766_53488840_53489120_53489190_53489533_53489659_53491837_53492680_53492823
ES.4854.35	chr11	+	5421	17	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	4	2281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.5472017559569	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTATTCATTTATATT	941	False	NA	20	True	AATAAA	-30	NA	53458227	53495075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.36	chr11	+	5261	18	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	5	2281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.4613343973904	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTATTCATTTATATT	942	False	NA	20	True	AATAAA	-30	NA	53458228	53495075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469806_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475269_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837_53492694_53492838
ES.4854.38	chr11	+	4191	17	NNC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	10	1057	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	20.5472017559569	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGGTGGACATTGTTC	947	False	NA	3	True	ATTAAA	-19	NA	53458233	53493851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484190_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.4	chr11	+	4429	10	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	5	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGTCATTTTTGGG	NA	False	NA	20	True	ATTAAA	-22	NA	53410577	53434926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ES.4854.40	chr11	+	6044	10	NNC	ENSMUSG00000018395.20	novel	2178	19	NA	NA	-6142	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	41.4052540353081	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTGGAGAGAACTCCT	NA	False	NA	17	True	AATAAA	-14	NA	53478634	53491928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53481553_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53486813_53486892_53488785_53488840_53489120_53489190_53489533_53489880_53489924
ES.4854.41	chr11	+	6087	8	ISM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	20823	3	-5748	0	3prime_fragment	FALSE	canonical	3	70	junction_1	7.86363368258451	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	174	False	NA	18	True	AATAAA	-15	NA	53479028	53491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.42	chr11	+	4196	7	NIC	ENSMUSG00000018395.20	novel	3161	18	NA	NA	-2059	1059	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	29.9411459737636	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGTGGACATTGTTCAT	3863	False	NA	5	True	ATTAAA	-21	NA	53482717	53493853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53484358_53484745_53484927_53485103_53485215_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ES.4854.43	chr11	+	2440	3	NNC	ENSMUSG00000018395.20	novel	2290	17	NA	NA	4568	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	NA	False	NA	18	True	AATAAA	-15	NA	53489344	53491929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53489434_53489533_53489884_53489928
ES.4854.5	chr11	+	4910	9	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	41	junction_8	20.9344214154583	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTTCATGGTGTCAT	NA	False	NA	13	True	ATTAAA	-15	NA	53410595	53434919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53410867_53422822_53422944_53425259_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.6	chr11	+	2395	10	NNC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	3	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.8486099428282	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGGACTTCTTTATGG	NA	False	NA	10	True	AATAAA	-17	NA	53410599	53432735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53410867_53422822_53422944_53425259_53425455_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ES.4854.8	chr11	+	4939	14	Fusion	ENSMUSG00000018395.20_ENSMUSG00000018398.19	novel	4563	10	NA	NA	11	35	multi-exon	FALSE	non_canonical	0	0	junction_3	45.6269929450441	474	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAGTCTCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	53410607	53492829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856_53434923_53449433_53449556_53452088_53452150_53452683_53452798_53492768
ES.4854.9	chr11	+	4714	9	NIC	ENSMUSG00000018398.19	novel	4436	10	NA	NA	-15	-3	intron_retention	FALSE	canonical	3	46	junction_8	19.5667926600146	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTTCATGGTGTCAT	NA	False	NA	13	True	ATTAAA	-15	NA	53410611	53434919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53410867_53422822_53422944_53425259_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ES.4855.1	chr11	-	164	1	Intergenic	novelGene_3759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCTATGAGG	NA	False	NA	NA	False	NA	NA	NA	53460958	53460794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53460800_53461000
ES.4856.1	chr11	+	184	1	Intergenic	novelGene_3760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAAAAGTTGTGC	9216	False	NA	NA	False	NA	NA	NA	53529188	53529372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53529200_53529400
ES.4857.1	chr11	+	158	1	Intergenic	novelGene_3761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAGTAAATAAATATTTA	1648	False	NA	NA	False	NA	NA	NA	53569042	53569200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53569000_53569200
ES.4858.1	chr11	+	4831	6	Intergenic	novelGene_3763	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATGATGTGTTTTCTC	386	False	NA	NA	False	NA	NA	NA	53582609	53594196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53583147_53583534_53585896_53586111_53586237_53588936_53589144_53589646_53589834_53592782
ES.4859.1	chr11	+	1100	1	Antisense	novelGene_ENSMUSG00000020380.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCTGTAAATGTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	53597599	53598699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_53597600_53598700
ES.486.1	chr1	-	2143	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	4	combination_of_known_splicesites	FALSE	canonical	1	64	junction_7	1921.58324305766	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTACCCTTTCCATG	4643	False	NA	-2	True	AATAAA	-20	NA	55126995	55116989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.12	chr1	-	6557	8	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	168	1	intron_retention	FALSE	canonical	2	4506	junction_5	711.525524087907	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4623	False	NA	-5	True	AATAAA	-17	NA	55127015	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55126101_55126937
ES.486.13	chr1	-	1817	10	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1953.26660864421	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4643	False	NA	-5	True	AATAAA	-17	NA	55126995	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117533_55119258_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.14	chr1	-	2222	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2413.92202384213	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4443	False	NA	-5	True	AATAAA	-17	NA	55127195	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121303_55122221_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ES.486.16	chr1	-	2247	11	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	149	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1938.89178656262	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4604	False	NA	-5	True	AATAAA	-17	NA	55127034	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122350_55123664_55123945_55125924_55126101_55126937
ES.486.17	chr1	-	2234	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1850.97436034231	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4643	False	NA	-5	True	AATAAA	-17	NA	55126995	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121305_55122221_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.18	chr1	-	2240	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	178	1	at_least_one_novel_splicesite	FALSE	canonical	2	29	junction_2	1834.21904475235	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4633	False	NA	-5	True	AATAAA	-17	NA	55127005	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117861_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.2	chr1	-	2362	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	63	-2	63	2	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4518	False	NA	-4	True	AATAAA	-18	NA	55127120	55116991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.21	chr1	-	2387	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	125	1	intron_retention	FALSE	canonical	2	4506	junction_6	666.456000048015	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4580	False	NA	-5	True	AATAAA	-17	NA	55127058	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.22	chr1	-	3882	1	Genic_Genomic	ENSMUSG00000025980.15	novel	NA	NA	NA	NA	6309	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2771	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	55120874	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_55117000_55120900
ES.486.23	chr1	-	4304	10	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	1	intron_retention	FALSE	canonical	2	4506	junction_6	693.676588819706	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGTGTTACCCTTTCC	4643	False	NA	-5	True	AATAAA	-17	NA	55126995	55116992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.26	chr1	-	1989	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	0	combination_of_known_splicesites	FALSE	canonical	1	91	junction_3	1906.58748553535	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4643	False	NA	-6	True	AATAAA	-16	NA	55126995	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.27	chr1	-	2059	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	1958.05592616759	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4643	False	NA	-6	True	AATAAA	-16	NA	55126995	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55126937
ES.486.28	chr1	-	2219	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	2	607	junction_10	1704.50371342831	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4635	False	NA	-6	True	AATAAA	-16	NA	55127003	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123921_55125924_55126101_55126937
ES.486.3	chr1	-	2466	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-32	2	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4204	False	NA	-4	True	AATAAA	-18	NA	55127434	55116991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ES.486.30	chr1	-	5241	6	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	2075	0	intron_retention	FALSE	canonical	3	5679	junction_3	420.129694261189	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	6530	False	NA	-6	True	AATAAA	-16	NA	55125108	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55118390_55119260_55120332_55120818_55120988_55121216_55122322_55122883_55122967_55123691
ES.486.32	chr1	-	2333	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-32	0	intron_retention	FALSE	canonical	2	335	junction_10	1859.5606577899	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4423	False	NA	-6	True	AATAAA	-16	NA	55127215	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ES.486.35	chr1	-	5466	6	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	1945	0	intron_retention	FALSE	canonical	2	4506	junction_3	846.514595266969	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	6400	False	NA	-6	True	AATAAA	-16	NA	55125238	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117867_55118214_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691
ES.486.37	chr1	-	2277	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	152	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1852.58460508779	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4607	False	NA	-6	True	AATAAA	-16	NA	55127031	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123685_55123945_55125924_55126101_55126937
ES.486.39	chr1	-	2228	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	180	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1851.88276765133	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4635	False	NA	-6	True	AATAAA	-16	NA	55127003	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119275_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.40	chr1	-	2283	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1850.97436034231	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4589	False	NA	-6	True	AATAAA	-16	NA	55127049	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122231_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.41	chr1	-	3114	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	180	0	intron_retention	FALSE	canonical	2	4506	junction_6	648.763100060415	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4635	False	NA	-6	True	AATAAA	-16	NA	55127003	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.43	chr1	-	4940	10	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	0	intron_retention	FALSE	canonical	2	4506	junction_6	707.305075010637	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4643	False	NA	-6	True	AATAAA	-16	NA	55126995	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.45	chr1	-	2593	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	178	0	intron_retention	FALSE	canonical	2	4506	junction_6	631.045648111133	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4633	False	NA	-6	True	AATAAA	-16	NA	55127005	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.48	chr1	-	8137	4	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	143	0	intron_retention	FALSE	canonical	3	5679	junction_3	527.915607733745	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4598	False	NA	-6	True	AATAAA	-16	NA	55127040	55116993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117867_55118214_55122967_55123691_55126101_55126937
ES.486.49	chr1	-	2227	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1851.88276765133	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTTACCCTTT	4643	False	NA	-7	True	AATAAA	-15	NA	55126995	55116994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118383_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.50	chr1	-	2263	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1881.80793146088	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTTACCCTTT	4633	False	NA	-7	True	AATAAA	-15	NA	55127005	55116994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122864_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.51	chr1	-	4217	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	185	-1	intron_retention	FALSE	canonical	2	4506	junction_7	671.017466240634	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTTACCCTTT	4640	False	NA	-7	True	AATAAA	-15	NA	55126998	55116994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.52	chr1	-	2959	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	-1	intron_retention	FALSE	canonical	2	4506	junction_6	677.363277717356	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTTACCCTTT	4643	False	NA	-7	True	AATAAA	-15	NA	55126995	55116994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.56	chr1	-	2488	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	162	-2	intron_retention	FALSE	canonical	2	4506	junction_6	660.625922894341	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGTGTTACCCTT	4617	False	NA	-8	True	AATAAA	-14	NA	55127021	55116995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.57	chr1	-	1948	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2375.38674363106	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGTGTTACCCTT	4643	False	NA	-8	True	AATAAA	-14	NA	55126995	55116995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117841_55118222_55118346_55119467_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.59	chr1	-	4754	9	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	144	-2	intron_retention	FALSE	canonical	3	5679	junction_5	386.860036059555	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTGTGTTACCCTT	4599	False	NA	-8	True	AATAAA	-14	NA	55127039	55116995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55120332_55120818_55120988_55121216_55122322_55122883_55122967_55123691_55123945_55125924
ES.486.6	chr1	-	2245	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	162	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1881.80793146088	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4617	False	NA	-4	True	AATAAA	-18	NA	55127021	55116991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122901_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.60	chr1	-	4617	8	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	1053	-6	intron_retention	FALSE	canonical	2	4506	junction_5	706.768992078222	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTGGTTGTGTTAC	5508	False	NA	-12	True	AATAAA	-10	NA	55126130	55116999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691
ES.486.61	chr1	-	2228	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	182	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1883.81455808585	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTGGTTGTGTTAC	4637	False	NA	-12	True	AATAAA	-10	NA	55127001	55116999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126944
ES.486.63	chr1	-	2225	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	180	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1877.49028895597	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAAGTTTCTGGTTGTG	4635	False	NA	-16	True	AATAAA	-6	NA	55127003	55117003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120239_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.65	chr1	-	2109	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	120	194	120	-194	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAGTGTCCTGCTTTCA	4575	False	NA	2	True	AATAAA	-39	NA	55127063	55117187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.69	chr1	-	2080	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-2	-198	combination_of_known_junctions	FALSE	canonical	2	106	junction_11	1855.12359081277	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATACCAGTGTCCTGCT	4234	False	NA	-2	True	AATAAA	-35	NA	55127404	55117191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127303
ES.486.7	chr1	-	2230	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1852.58460508779	2772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4643	False	NA	-4	True	AATAAA	-18	NA	55126995	55116991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122960_55123691_55123945_55125924_55126101_55126937
ES.486.70	chr1	-	4009	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	180	-214	intron_retention	FALSE	canonical	2	4506	junction_7	671.017466240634	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGGTGCAAGAGCCAT	4635	False	NA	-18	True	AATAAA	-19	NA	55127003	55117207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.72	chr1	-	2185	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	33	-214	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGGTGCAAGAGCCAT	4269	False	NA	-18	True	AATAAA	-19	NA	55127369	55117207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ES.486.74	chr1	-	1767	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	-215	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	1920.50087216851	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGGTGCAAGAGCCA	4643	False	NA	-19	True	AATAAA	-18	NA	55126995	55117208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55125924_55126101_55126937
ES.486.75	chr1	-	2377	11	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	179	-215	intron_retention	FALSE	canonical	2	4506	junction_6	631.045648111133	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGGTGCAAGAGCCA	4634	False	NA	-19	True	AATAAA	-18	NA	55127004	55117208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.76	chr1	-	5916	6	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	149	-215	intron_retention	FALSE	canonical	2	4506	junction_2	813.734207220023	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGGTGCAAGAGCCA	4604	False	NA	-19	True	AATAAA	-18	NA	55127034	55117208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55118390_55119260_55121311_55122225_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.77	chr1	-	6953	6	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	182	-215	intron_retention	FALSE	canonical	3	5679	junction_2	404.71174927348	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGGTGCAAGAGCCA	4637	False	NA	-19	True	AATAAA	-18	NA	55127001	55117208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55120332_55120818_55120988_55121216_55122322_55122883_55122967_55123691_55126101_55126937
ES.486.78	chr1	-	2016	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	188	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1850.97436034231	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGGGTGCAAGAGCC	4643	False	NA	-20	True	AATAAA	-17	NA	55126995	55117209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121304_55122221_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ES.486.79	chr1	-	3872	5	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	182	-216	intron_retention	FALSE	canonical	0	0	junction_3	2643.30106117332	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGGGTGCAAGAGCC	4637	False	NA	-20	True	AATAAA	-17	NA	55127001	55117209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55118390_55119260_55120988_55121216_55121437_55125419_55126101_55126937
ES.486.8	chr1	-	2321	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	-43	2	combination_of_known_junctions	FALSE	canonical	2	106	junction_11	1855.12359081277	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	4193	False	NA	-4	True	AATAAA	-18	NA	55127445	55116991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127303
ES.486.80	chr1	-	2257	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	446	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1883.81455808585	2769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGGGTGCAAGAGCC	4901	False	NA	-20	True	AATAAA	-17	NA	55126737	55117209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126441
ES.486.81	chr1	-	2000	12	NNC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	162	-216	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	1866.85374603661	2769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGGGTGCAAGAGCC	4617	False	NA	-20	True	AATAAA	-17	NA	55127021	55117209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125969_55126101_55126937
ES.4860.1	chr11	-	8162	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	11	-3020	11	3020	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGCTATGACGTTTTCC	NA	False	NA	NA	False	NA	NA	NA	53598135	53537325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.10	chr11	-	5072	24	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_23	60.6740960849668	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGGATGTGGGTGTTTT	NA	False	NA	6	True	NA	NA	NA	53598144	53540340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53597753
ES.4860.11	chr11	-	5152	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	80.0390421225097	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCATGGATGTGGGT	NA	False	NA	1	True	NA	NA	NA	53598149	53540345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543188_53545699_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585889_53586105_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.15	chr11	-	5091	26	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	4	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	60.8086309663357	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGCATGGATGTGGG	NA	False	NA	0	True	NA	NA	NA	53598142	53540346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583003_53583059_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.18	chr11	-	5172	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	-21	2	-21	-2	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGGCATGGATGTGG	NA	False	NA	-1	True	NA	NA	NA	53598167	53540347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.2	chr11	-	5672	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	4	-523	4	523	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTAGCCCAGGCTGGC	NA	False	NA	NA	False	NA	NA	NA	53598142	53539822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.20	chr11	-	5157	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	61.9891903659196	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGGCATGGATGTGG	NA	False	NA	-1	True	NA	NA	NA	53598142	53540347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589638_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.21	chr11	-	4542	22	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	81.9447576764835	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGGCATGGATGTGG	NA	False	NA	-1	True	NA	NA	NA	53598141	53540347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545786_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53596811_53596896_53597753
ES.4860.25	chr11	-	5103	24	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.6415698999461	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGGGGCATGGATGTG	NA	False	NA	-2	True	NA	NA	NA	53598141	53540348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545883_53558844_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586105_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.28	chr11	-	4185	14	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	21919	10	-5188	-10	3prime_fragment	FALSE	canonical	2	205	junction_2	33.3086693763246	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53576227	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952
ES.4860.29	chr11	-	5063	26	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	60.8086309663357	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598134	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53570886_53570953_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.3	chr11	-	5392	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	4	-243	4	243	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAATGGTAAGGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	53598142	53540102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.31	chr11	-	4944	24	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-11	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_21	62.4184004182665	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598133	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53592783_53592936_53596811_53596896_53597753
ES.4860.33	chr11	-	5119	22	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-10	-10	intron_retention	FALSE	canonical	0	0	junction_13	65.642334661202	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598132	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.35	chr11	-	5132	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.0603285118601	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598142	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541476_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.36	chr11	-	4085	20	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-3218	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	65.0103337193766	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53589045	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940
ES.4860.37	chr11	-	4602	22	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	-2	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	62.3025679833846	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTATTTGGGGCAT	NA	False	NA	-9	True	NA	NA	NA	53598148	53540355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53596811_53596896_53597753
ES.4860.38	chr11	-	4795	23	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	4	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	64.4330006304839	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTGTGTATTTGGGG	NA	False	NA	-12	True	NA	NA	NA	53598142	53540358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.39	chr11	-	4204	4	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	48972	25	21865	-25	3prime_fragment	FALSE	canonical	2	205	junction_2	23.1516738055805	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAGCAAATATTT	NA	False	NA	-24	True	NA	NA	NA	53549174	53540370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359
ES.4860.4	chr11	-	5265	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	-13	-99	-13	99	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTAGTTAGTTTTATG	NA	False	NA	-1	True	NA	NA	NA	53598159	53540246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.40	chr11	-	4950	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	4	-25	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	61.7140443002149	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAGCAAATATTT	NA	False	NA	-24	True	NA	NA	NA	53598142	53540370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597927
ES.4860.41	chr11	-	4989	24	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	5	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	62.4435321470073	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAGCAAATATTT	NA	False	NA	-24	True	NA	NA	NA	53598141	53540370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.43	chr11	-	4896	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	1240	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	79.6939349253686	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAGCAAATATTT	NA	False	NA	-24	True	NA	NA	NA	53596882	53540370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53589951_53590126_53592783_53592936_53596811
ES.4860.45	chr11	-	4987	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	5	-58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	80.2025971974862	427	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTCTTTGGTATAC	NA	False	NA	-57	True	NA	NA	NA	53598141	53540403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53579023_53579105_53582939_53583147_53583534_53583729_53585727_53585889_53586105_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.46	chr11	-	5024	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	-5	134	-5	-134	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTCTTCCTTCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	53598151	53540479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.47	chr11	-	4688	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	4	461	4	-461	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCATGTCTATCTATGT	NA	False	NA	NA	False	NA	NA	NA	53598142	53540806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.49	chr11	-	4408	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	18	-704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	59.5734840344259	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCCTGCTGTCACATGA	NA	False	NA	NA	False	TTTAAA	-43	NA	53598104	53541049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592937_53596811_53596896_53597753
ES.4860.52	chr11	-	3895	19	ISM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	4	24580	4	656	5prime_fragment	FALSE	canonical	3	232	junction_8	30.5359533082634	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTTATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	53598142	53564925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.53	chr11	-	264	1	Intergenic	novelGene_3762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGTTGATGTTTTTA	NA	False	NA	NA	False	AAAAAG	-43	NA	53572296	53572032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53572000_53572300
ES.4860.54	chr11	-	5007	9	ISM	ENSMUSG00000020380.17	ENSMUST00000124352.2	2211	12	-20	5563	4	3103	5prime_fragment	FALSE	canonical	3	242	junction_5	31.42053468673	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGATTTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	53598142	53579644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4860.55	chr11	-	1766	4	NIC	ENSMUSG00000020380.17	novel	2211	12	NA	NA	-12	-1974	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	120.006481306451	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTGTCTCCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	53598134	53584721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53585894_53586109_53586239_53596811_53596896_53597753
ES.4860.8	chr11	-	5568	24	NIC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	5	89	intron_retention	FALSE	canonical	2	205	junction_2	32.0240930095028	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAGTTGATTAGTAGT	NA	False	NA	-11	True	NA	NA	NA	53598141	53540256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ES.4861.1	chr11	-	176	1	Intergenic	novelGene_3764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAACAGTCTT	8418	False	NA	NA	False	NA	NA	NA	53610245	53610069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53610100_53610200
ES.4862.1	chr11	+	182	1	Intergenic	novelGene_3765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	53646350	53646532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53646400_53646500
ES.4863.1	chr11	+	177	1	Intergenic	novelGene_3766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53657172	53657349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53657200_53657300
ES.4864.1	chr11	+	2145	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	-9	0	-9	0	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53660831	53668149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ES.4864.2	chr11	+	2291	8	NIC	ENSMUSG00000018899.18	novel	2136	10	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	46	junction_1	11.0379678697611	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	False	NA	8	True	TATAAA	-15	NA	53660862	53668147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ES.4864.3	chr11	+	2202	10	NIC	ENSMUSG00000018899.18	novel	2069	10	NA	NA	-51	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	19.5170074613634	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	False	NA	8	True	TATAAA	-15	NA	53661251	53668147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53661584_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ES.4864.4	chr11	+	2700	9	ISM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	439	2	-23	-2	3prime_fragment	FALSE	canonical	3	59	junction_3	8.3132048573339	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	False	NA	8	True	TATAAA	-15	NA	53661279	53668147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ES.4865.1	chr11	-	1648	3	NNC	ENSMUSG00000081769.10	novel	1073	4	NA	NA	-9956	1515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCTTCCTTTTACTTC	9047	False	NA	NA	False	AATAAA	-18	NA	53696657	53693007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53694300_53695807_53695935_53696428
ES.4866.1	chr11	-	4104	2	Intergenic	novelGene_3767	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGATTGTTATTCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	53738213	53733929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53735935_53736114
ES.4866.2	chr11	-	178	1	Intergenic	novelGene_3768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTGCCCCAC	NA	False	NA	NA	False	NA	NA	NA	53737703	53737525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_53737500_53737700
ES.4867.1	chr11	+	351	1	Intergenic	novelGene_3769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAACAAAGTCTGGGG	NA	False	NA	NA	False	NA	NA	NA	53752062	53752413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53752100_53752400
ES.4868.1	chr11	-	3185	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-119	-4	-119	4	multi-exon	FALSE	canonical	3	28	junction_7	3.67507453523138	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATACAATCTTTATTCC	NA	False	NA	NA	False	AATAAA	-27	NA	53782605	53755363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ES.4868.10	chr11	-	2453	8	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-4489	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.5925147834509	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	2771	False	NA	NA	False	AATAAA	-16	NA	53766992	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766821
ES.4868.11	chr11	-	8306	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	11669	8	-8314	-8	intron_retention	FALSE	canonical	3	30	junction_5	3.32264954516723	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATACCAATTGAATAC	NA	False	NA	NA	False	AATAAA	-15	NA	53770817	53755375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493
ES.4868.12	chr11	-	4948	9	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	185	-8	intron_retention	FALSE	canonical	0	0	junction_6	11.8736841376213	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATACCAATTGAATAC	NA	False	NA	NA	False	AATAAA	-15	NA	53782236	53755375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53762495_53764493_53764621_53765760_53765933_53766821_53766990_53774486_53774591_53781972
ES.4868.13	chr11	-	2396	10	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-118	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.3865851328506	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCGTCTTTTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	53782604	53756170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766815_53766990_53774486_53774591_53781972
ES.4868.14	chr11	-	4545	1	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-3269	3277	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGGTAGACTTCCCCT	3991	False	NA	NA	False	AAAAAG	-2	NA	53765772	53761227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53761200_53765800
ES.4868.15	chr11	-	1865	6	ISM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	-86	6420	-86	2717	5prime_fragment	FALSE	canonical	3	28	junction_3	3.37045990927054	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTCTGACTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	53782572	53761787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ES.4868.2	chr11	-	3424	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-22	0	intron_retention	FALSE	canonical	3	28	junction_6	3.89711431702997	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	53782508	53755367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ES.4868.3	chr11	-	4851	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	277	0	intron_retention	FALSE	canonical	3	28	junction_6	3.75624480032918	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	53782144	53755367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ES.4868.4	chr11	-	2979	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-79	-7	combination_of_known_splicesites	FALSE	canonical	3	3	junction_7	11.112352361224	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782565	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53774486_53774591_53781972
ES.4868.5	chr11	-	3143	10	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-94	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.3865851328506	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782580	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765927_53766834_53766990_53774486_53774591_53781972
ES.4868.6	chr11	-	5090	8	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	11	-7	intron_retention	FALSE	canonical	0	0	junction_6	14.8310209922807	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782475	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53762495_53764493_53764621_53765760_53765933_53766815_53766990_53781972
ES.4868.7	chr11	-	3032	9	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-81	-7	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	10.2339813855606	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782567	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53781972
ES.4868.8	chr11	-	2878	8	NIC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-82	-7	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	10.8984177844347	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782568	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53781972
ES.4868.9	chr11	-	2853	8	NNC	ENSMUSG00000018900.8	novel	3062	10	NA	NA	-105	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.5925147834509	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	False	NA	NA	False	AATAAA	-16	NA	53782591	53755374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765885_53781972
ES.4869.1	chr11	+	3041	1	Genic_Genomic	ENSMUSG00000082271.2	novel	NA	NA	NA	NA	956	2618	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATCCATCCATCCATCC	7152	False	NA	NA	False	NA	NA	NA	53793971	53797012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_53794000_53797000
ES.487.1	chr1	+	159	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55144250	55144409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55144200_55144400
ES.4870.1	chr11	+	246	1	Intergenic	novelGene_3770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGATAAAGACCACCTTC	NA	False	NA	NA	False	NA	NA	NA	53825095	53825341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_53825100_53825300
ES.4871.1	chr11	-	3727	9	NNC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	-55	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.04633819296811	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTACATTCTTTATTTC	NA	False	NA	NA	False	AATAAA	-32	NA	53871213	53840777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53842182_53842532_53842669_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53850990_53851448_53870290
ES.4871.2	chr11	-	3574	9	NIC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	-29	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.02715934252836	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCAACTGACTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	53871187	53840786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53842182_53842532_53842669_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53851108_53851448_53870290
ES.4871.3	chr11	-	3329	9	NIC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	0	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	1.5612494995996	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCAACTGACTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	53871158	53840786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53842182_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53851108_53851264_53860325_53860430_53870290
ES.4871.4	chr11	-	3499	9	NIC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	0	-10	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.3228756555323	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAATAG	NA	False	NA	NA	False	AATAAA	-9	NA	53871158	53840800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53842182_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53851108_53851448_53860325_53860430_53870290
ES.4871.5	chr11	-	1219	3	ISM	ENSMUSG00000063652.11	ENSMUST00000076493.11	3461	10	26833	807	-353	-209	3prime_fragment	FALSE	canonical	0	0	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGATTTCTCGTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	53844325	53841597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53842182_53842532_53842669_53843826
ES.4871.6	chr11	-	2596	8	NIC	ENSMUSG00000063652.11	novel	3461	10	NA	NA	0	-211	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.72614942479922	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTTGATTTCTCGTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	53871158	53841599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53842182_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53851108_53851448_53870290
ES.4872.1	chr11	-	2794	10	FSM	ENSMUSG00000020334.7	ENSMUST00000020586.7	2263	10	-535	4	-535	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGATGGTAACAATGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	53919451	53873952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882912_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ES.4873.1	chr11	-	843	2	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	13447	-320	9001	320	3prime_fragment	FALSE	canonical	3	220	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGACCATGACAGCCCT	NA	False	NA	NA	False	NA	NA	NA	53946393	53945433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53946066_53946182
ES.4873.2	chr11	-	1208	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	-27	1	-27	-1	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTAGTGTCTGGCCTG	NA	False	NA	-3	True	AATAAA	-21	NA	53959867	53945754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ES.4873.3	chr11	-	1061	6	FSM	ENSMUSG00000020388.13	ENSMUST00000093109.11	962	6	-81	-18	1	-2	multi-exon	FALSE	canonical	0	0	junction_1	86.7787992541957	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTAGTGTCTGGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	53959839	53945755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_53946066_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ES.4873.4	chr11	-	5097	5	NIC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	11	-2	intron_retention	FALSE	canonical	3	190	junction_3	19.5624001594896	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTAGTGTCTGGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	53959829	53945755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53946066_53946182_53946780_53946968_53950843_53954460_53954613_53959665
ES.4873.5	chr11	-	1192	7	NNC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	81.0507385667905	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTAGTGTCTGGCCT	NA	False	NA	-4	True	AATAAA	-20	NA	53959837	53945755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947166_53950763_53950843_53954460_53954613_53959665
ES.4873.6	chr11	-	4902	5	NIC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	7	-3	intron_retention	FALSE	canonical	3	190	junction_3	22.8514222752108	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTAGCTAGTGTCTGGCC	NA	False	NA	-5	True	AATAAA	-19	NA	53959833	53945756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53946301_53946615_53946780_53946968_53950843_53954460_53954613_53959665
ES.4873.8	chr11	-	1474	6	NIC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	190	junction_4	18.2252571998312	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTAGCTAGTGTCTGG	NA	False	NA	-7	True	AATAAA	-17	NA	53959822	53945758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_53946066_53946182_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ES.4873.9	chr11	-	3424	2	ISM	ENSMUSG00000020388.13	ENSMUST00000144477.2	541	5	6251	-987	6023	-5	3prime_fragment	FALSE	canonical	3	239	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTAGCTAGTGTCTGG	NA	False	NA	-7	True	AATAAA	-17	NA	53949371	53945758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_53946780_53946968
ES.4874.1	chr11	+	2409	17	NNC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-56	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	25.4459445442687	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAATAGCCTTATT	NA	False	NA	13	True	AATAAA	-15	NA	53991693	54022476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53991867_53992345_53992474_54001034_54001141_54001307_54001394_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ES.4874.10	chr11	+	6004	13	NIC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	35	junction_10	12.8157346865311	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAATAGCCTTATT	NA	False	NA	13	True	AATAAA	-15	NA	53991869	54022476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54019943_54020291_54020389_54022015
ES.4874.11	chr11	+	3458	14	NIC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-7	3	intron_retention	FALSE	canonical	2	3	junction_2	22.5375426433843	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAGCCTTATTTTGGA	NA	False	NA	18	True	AATAAA	-20	NA	53991886	54022481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53992474_54001034_54001141_54001307_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ES.4874.12	chr11	+	2160	15	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	554	-5	272	5	3prime_fragment	FALSE	canonical	3	35	junction_11	14.555313217418	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53992342	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ES.4874.13	chr11	+	1827	12	NIC	ENSMUSG00000018906.15	novel	1997	3	NA	NA	-39	-2	combination_of_known_junctions	TRUE	canonical	1	6	junction_1	24.1373480367652	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAATAGCCTTATT	NA	False	NA	13	True	AATAAA	-15	NA	54003989	54022476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54004156_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ES.4874.14	chr11	+	3415	3	FSM	ENSMUSG00000018906.15	ENSMUST00000139315.2	1997	3	-1426	8	-1426	5	multi-exon	FALSE	canonical	3	70	junction_2	1	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	54017092	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54019943_54020291_54020389_54022015
ES.4874.2	chr11	+	2559	15	NIC	ENSMUSG00000018906.15	novel	2263	16	NA	NA	3	-2	intron_retention	FALSE	canonical	3	31	junction_11	14.84769617256	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAATAGCCTTATT	NA	False	NA	13	True	AATAAA	-15	NA	53991791	54022476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ES.4874.3	chr11	+	2729	16	NIC	ENSMUSG00000018906.15	novel	2263	16	NA	NA	4	5	intron_retention	FALSE	canonical	2	3	junction_3	21.5266243418599	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991792	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53991867_53992345_53992474_54001034_54001141_54001307_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ES.4874.4	chr11	+	2216	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	52	-5	1	5	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991801	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ES.4874.5	chr11	+	2222	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	13	-5	1	5	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991801	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ES.4874.6	chr11	+	2207	16	NNC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.6511739481566	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991804	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53991867_53992357_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ES.4874.7	chr11	+	5339	15	NIC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	0	-3	intron_retention	FALSE	canonical	2	3	junction_3	20.9318622473696	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTAAATAGCCTTAT	NA	False	NA	12	True	AATAAA	-14	NA	53991816	54022475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_53991867_53992345_53992474_54001034_54001141_54001307_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54019943_54020291_54020389_54022015
ES.4874.8	chr11	+	2124	16	NNC	ENSMUSG00000018906.15	novel	2230	16	NA	NA	29	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	21.437661564017	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTATTTTGGAGT	NA	False	NA	20	True	AATAAA	-22	NA	53991845	54022483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020335_54022015
ES.4874.9	chr11	+	2643	14	NNC	ENSMUSG00000018906.15	novel	2263	16	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.3574543103933	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTTAAATAGCCTTA	NA	False	NA	11	True	AATAAA	-13	NA	53991866	54022474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_53992474_54001034_54001141_54001811_54001998_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54019873_54019943_54020298_54020389_54022015
ES.4875.1	chr11	-	3658	1	Intergenic	novelGene_3771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTTTATTCCTTAAAG	NA	False	NA	NA	False	AATACA	-16	NA	54047975	54044317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54044300_54048000
ES.4876.1	chr11	+	3642	19	NNC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	17	-7543	intron_retention	FALSE	canonical	0	0	junction_10	13.6554832291729	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTGTCTTTTATCAGC	NA	False	NA	NA	False	AATAAA	-23	NA	54194640	54244480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227668_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847
ES.4876.10	chr11	+	892	5	ISM	ENSMUSG00000020333.18	ENSMUST00000127731.2	4358	10	10379	25	-12	13	3prime_fragment	FALSE	canonical	3	38	junction_3	12.6169528809455	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAGAAAAAACATA	NA	False	NA	-16	True	AATATA	-26	NA	54236701	54252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.2	chr11	+	4508	20	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	17	-3	intron_retention	FALSE	canonical	3	38	junction_10	8.3127909317384	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGATATATTGTACTTA	NA	False	NA	2	True	ATTAAA	-16	NA	54194640	54252358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.3	chr11	+	2553	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	25	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACTGATATATTGTACT	NA	False	NA	0	True	ATTAAA	-14	NA	54194648	54252356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.4	chr11	+	4228	19	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	27	13	intron_retention	FALSE	canonical	0	0	junction_15	14.9451672687648	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAGAAAAAACATA	NA	False	NA	-16	True	AATATA	-26	NA	54194650	54252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.5	chr11	+	1542	13	NIC	ENSMUSG00000020333.18	novel	1121	12	NA	NA	27	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	7.87400787401181	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGAGCCATGATTTT	NA	False	NA	NA	False	NA	NA	NA	54194650	54230115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825
ES.4876.6	chr11	+	5771	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	29	4	29	0	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTTCATAATTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	54194652	54255578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.7	chr11	+	2522	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	40	3242	40	13	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAGAAAAAACATA	NA	False	NA	-16	True	AATATA	-26	NA	54194663	54252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.8	chr11	+	2715	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	-146	3238	34	13	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAGAAAAAACATA	NA	False	NA	-16	True	AATATA	-26	NA	54194881	54252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4876.9	chr11	+	2700	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108904.10	2594	21	-131	25	49	13	multi-exon	FALSE	canonical	3	10	junction_1	12.5876924017073	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACATAAAGAAAAAACATA	NA	False	NA	-16	True	AATATA	-26	NA	54194896	54252340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ES.4877.1	chr11	+	1483	14	FSM	ENSMUSG00000020332.8	ENSMUST00000094193.3	1433	14	-30	-20	-30	20	multi-exon	TRUE	canonical	0	0	junction_10	0.737820234355803	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAATGGTCTTGTCATTT	NA	False	NA	NA	False	ATTAAA	-38	NA	54261447	54317636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54261619_54261709_54261804_54262563_54262646_54264325_54264387_54281292_54281425_54285457_54285578_54286371_54286412_54289281_54289347_54290638_54290716_54296703_54296860_54300475_54300557_54302621_54302742_54308555_54308677_54317473
ES.4877.2	chr11	+	1566	1	FSM	ENSMUSG00000078151.4	ENSMUST00000144172.2	876	1	-115	-575	-115	575	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	54291802	54293368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54291800_54293400
ES.4878.1	chr11	-	177	1	Intergenic	novelGene_3772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	54288199	54288022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54288000_54288200
ES.4879.1	chr11	+	6362	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-99	-8	-99	8	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGTTTCTTTCATAT	1877	False	NA	35	True	AATAAA	-25	NA	54328925	54409069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.10	chr11	+	1945	6	ISM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	4	34420	4	-18890	5prime_fragment	FALSE	canonical	3	98	junction_5	8.63481325796916	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAGACAAACAGAAAAAAA	1980	False	NA	NA	False	NA	NA	NA	54329028	54374641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320
ES.4879.11	chr11	+	4936	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	4	1315	4	-1315	multi-exon	FALSE	canonical	3	95	junction_9	15.4083965785252	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAGAAAGAAAGAAA	1980	False	NA	NA	False	NA	NA	NA	54329028	54407746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.12	chr11	+	9446	17	NIC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	14	-2	intron_retention	FALSE	canonical	3	95	junction_9	15.8212673322967	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTAATGTTTGTGTT	1990	False	NA	25	True	AATAAA	-15	NA	54329038	54409059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.13	chr11	+	6248	18	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	40.7052023064582	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTAATGTTTGTGTTTC	1994	False	NA	27	True	AATAAA	-17	NA	54329042	54409061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366460_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387413_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.14	chr11	+	6101	17	NIC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	19	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	32.4923067817599	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGATGGGTAATGTT	1995	False	NA	19	True	AATAAA	-9	NA	54329043	54409053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54329215_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.15	chr11	+	6252	18	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	31.4647053324975	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1995	False	NA	28	True	AATAAA	-18	NA	54329043	54409062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366442_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.16	chr11	+	5986	18	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	24	-242	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	31.2596006013798	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATTTCATTTTGTTGCA	2000	False	NA	NA	False	AATAAA	-10	NA	54329048	54408819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366460_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.17	chr11	+	6002	17	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	39.9562260480141	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	2002	False	NA	28	True	AATAAA	-18	NA	54329050	54409062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366460_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395706_54404195_54404312_54406323
ES.4879.18	chr11	+	6854	1	Intergenic	novelGene_3775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAGCAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	54357792	54364646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54357800_54364600
ES.4879.19	chr11	+	5765	17	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	11136	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.4923067817599	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	NA	False	NA	28	True	AATAAA	-18	NA	54366521	54409062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384077_54384186_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.2	chr11	+	6137	18	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	-47	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	40.5215137869351	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTGTGTTTCTTTCAT	1929	False	NA	33	True	AATAAA	-23	NA	54328977	54409067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366460_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384186_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.20	chr11	+	3412	2	NNC	ENSMUSG00000035992.16	novel	2738	14	NA	NA	15639	-18890	intron_retention	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAGACAAACAGAAAAAAA	396	False	NA	NA	False	NA	NA	NA	54371024	54374641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54372783_54372987
ES.4879.21	chr11	+	3958	1	NIC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	16246	-17942	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGGAAAAAAGGGAA	1003	False	NA	NA	False	NA	NA	NA	54371631	54375589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54371600_54375600
ES.4879.22	chr11	+	4844	1	NIC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	20572	-12730	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5329	False	NA	NA	False	NA	NA	NA	54375957	54380801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54376000_54380800
ES.4879.23	chr11	+	7127	12	ISM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	47922	-1	21561	1	3prime_fragment	FALSE	canonical	3	95	junction_3	16.216000668659	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	6318	False	NA	28	True	AATAAA	-18	NA	54376946	54409062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.24	chr11	+	2731	1	NIC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	50937	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGATGGGTAATGTT	5298	False	NA	19	True	AATAAA	-9	NA	54406322	54409053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54406300_54409100
ES.4879.3	chr11	+	3590	6	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	-36	-18890	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	45.1060971488334	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAGACAAACAGAAAAAAA	1940	False	NA	NA	False	NA	NA	NA	54328988	54374641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54372783_54372987
ES.4879.5	chr11	+	4472	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-29	1812	-29	-1812	multi-exon	FALSE	canonical	3	95	junction_9	15.4083965785252	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAGCAATGGCAAAAATA	1947	False	NA	NA	False	AATAAA	-25	NA	54328995	54407249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.6	chr11	+	3335	16	ISM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	-19	8241	-19	7289	5prime_fragment	FALSE	canonical	3	95	junction_9	15.7211817480607	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGGTGTTGGTCTCTA	1957	False	NA	NA	False	AATAAA	-6	NA	54329005	54400820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707
ES.4879.8	chr11	+	11068	17	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_5	32.4805230099517	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTAATGTTTGTGTTTC	1975	False	NA	27	True	AATAAA	-17	NA	54329023	54409061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54372783_54372987_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.4879.9	chr11	+	6136	18	NNC	ENSMUSG00000035992.16	novel	6255	18	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	30.8534879108177	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAATGTTTGTGTTTCT	1979	False	NA	28	True	AATAAA	-18	NA	54329027	54409062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384104_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ES.488.1	chr1	-	179	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	55155034	55154855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55154900_55155000
ES.4880.1	chr11	-	6046	1	Intergenic	novelGene_3773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTATATCACTTTCCACA	5934	False	NA	NA	False	NA	NA	NA	54347534	54341488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54341500_54347500
ES.4881.1	chr11	-	2230	1	Intergenic	novelGene_3774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54355344	54353114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54353100_54355300
ES.4882.1	chr11	-	170	1	Intergenic	novelGene_3776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAAAAAAGAATCG	NA	False	NA	NA	False	NA	NA	NA	54398004	54397834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54397800_54398000
ES.4883.1	chr11	-	245	1	Intergenic	novelGene_3777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	TTTAAA	-40	NA	54413480	54413235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54413200_54413500
ES.4884.1	chr11	+	8238	28	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-45	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	19.6917256825463	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTCCTTCCCAAGT	NA	False	NA	16	True	AATAAA	-17	NA	54413627	54590114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522184_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.10	chr11	+	8075	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	19.1808583083184	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGCTTCCTTCC	NA	False	NA	11	True	AATAAA	-12	NA	54413713	54590109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.11	chr11	+	7076	28	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-1	-1117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	27.8505712865581	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATCTGTGGCTTTGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54413713	54588994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54535914_54536031_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.13	chr11	+	4499	24	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.5823750470114	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTGTATTTTCTTCT	NA	False	NA	NA	False	AGTAAA	-21	NA	54413716	54579078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527046_54530578_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54578414
ES.4884.14	chr11	+	8037	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	19.827659838583	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413716	54590111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.15	chr11	+	3700	23	ISM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	44	19927	1	-8667	5prime_fragment	FALSE	canonical	3	58	junction_8	12.8713436595915	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCAGGTGCCAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	54413716	54570184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064
ES.4884.16	chr11	+	1735	12	NIC	ENSMUSG00000037533.21	novel	1829	13	NA	NA	1	-22	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	28.1436691940209	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATTTAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	54413716	54525813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ES.4884.17	chr11	+	4563	1	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	-25606	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTACTGTATTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	54413716	54418279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413700_54418300
ES.4884.18	chr11	+	8247	29	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.4693425430639	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413716	54590111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54450205_54450308_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.19	chr11	+	6684	29	NNC	ENSMUSG00000037533.21	novel	5864	29	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	19.1890101945071	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	14	True	AATAAA	-15	NA	54413716	54590112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905_54587102_54588563
ES.4884.2	chr11	+	7917	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-26	5	combination_of_known_junctions	FALSE	canonical	3	5	junction_26	19.1977023403304	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTCCTTCCCAAGTAC	NA	False	NA	18	True	AATAAA	-19	NA	54413646	54590116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54586905
ES.4884.20	chr11	+	6853	28	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	1020	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	19.8345695917918	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCTTTGTAATCCAAGT	NA	False	NA	NA	False	AAGAAA	-14	NA	54413716	54588825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567236_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.21	chr11	+	7005	26	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	1	-999	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.7076992049037	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGTGTATGAGTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	54413716	54589112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54437198_54437256_54443615_54443700_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.22	chr11	+	1666	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	20	143	-1	-143	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGGCTCAAAAGAATTT	NA	False	NA	NA	False	AAGAAA	-13	NA	54413735	54525692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ES.4884.23	chr11	+	8034	28	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-1	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	19.5959179422654	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGAACATGCATCAAC	NA	False	NA	-6	True	AATACA	-9	NA	54413735	54590092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585352_54586931
ES.4884.24	chr11	+	7936	26	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.2492851383955	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	14	True	AATAAA	-15	NA	54413735	54590112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527054_54530624_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.25	chr11	+	8154	29	NNC	ENSMUSG00000037533.21	novel	5864	29	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	24.1118513920234	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	14	True	AATAAA	-15	NA	54413746	54590112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54454793_54454832_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.26	chr11	+	8583	27	ISM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	114	999	15	-999	intron_retention	FALSE	canonical	3	58	junction_8	11.8749026778946	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGTGTATGAGTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	54413786	54589112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095
ES.4884.27	chr11	+	2281	1	Intergenic	novelGene_3778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54423146	54425427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54423100_54425400
ES.4884.28	chr11	+	7045	19	ISM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	103012	1	-480	-1	3prime_fragment	FALSE	canonical	3	64	junction_18	8.20568908339411	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGCTTCCTTCCC	375	False	NA	12	True	AATAAA	-13	NA	54516684	54590110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.29	chr11	+	6552	18	NNC	ENSMUSG00000037533.21	novel	7131	18	NA	NA	383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	20.4768415060107	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	747	False	NA	13	True	AATAAA	-14	NA	54517547	54590111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54587101
ES.4884.3	chr11	+	1905	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	-64	-12	-21	12	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGTTTTGGAACTTGC	NA	False	NA	NA	False	AATAAA	-27	NA	54413651	54525847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ES.4884.30	chr11	+	5508	10	ISM	ENSMUSG00000037533.21	ENSMUST00000239168.2	7131	18	34462	0	-30631	0	3prime_fragment	FALSE	canonical	3	64	junction_9	6.83310749400969	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54551626	54590111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.31	chr11	+	5180	9	NIC	ENSMUSG00000037533.21	novel	7131	18	NA	NA	-30426	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	26.9023117036436	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTTCCTTCCCAA	NA	False	NA	14	True	AATAAA	-15	NA	54551831	54590112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54552013_54554828_54555041_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.32	chr11	+	3732	4	NNC	ENSMUSG00000037533.21	novel	7131	18	NA	NA	-134	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	35.5058680596133	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTGTGCTTCCTTCCC	NA	False	NA	12	True	AATAAA	-13	NA	54582123	54590110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54582567_54585095_54585399_54586905_54587779_54587997
ES.4884.33	chr11	+	4675	1	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	3177	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGCTTCCTTCC	NA	False	NA	11	True	AATAAA	-12	NA	54585434	54590109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54585400_54590100
ES.4884.4	chr11	+	8136	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.9745400077376	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413655	54590111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.5	chr11	+	8091	28	NIC	ENSMUSG00000037533.21	novel	5864	29	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	24.906243949145	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGTGCTTCCTTCC	NA	False	NA	11	True	AATAAA	-12	NA	54413668	54590109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54562480_54562505_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.7	chr11	+	7188	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	2	999	2	-999	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATGTGTATGAGTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	54413674	54589112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4884.8	chr11	+	2991	17	ISM	ENSMUSG00000037533.21	ENSMUST00000207429.2	5164	29	-89	46446	10	436	5prime_fragment	FALSE	canonical	3	58	junction_8	14.2191277422351	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTTGAAAAGATGTGAAA	NA	False	NA	NA	False	TATAAA	-19	NA	54413682	54540724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007
ES.4884.9	chr11	+	7106	28	NNC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	-1	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.7302309122587	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGATGTGTATGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	54413713	54589110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54413945_54431405_54431435_54434404_54434476_54437198_54437256_54443615_54443700_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ES.4885.1	chr11	-	133	1	Intergenic	novelGene_3779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54532431	54532298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54532300_54532400
ES.4886.1	chr11	-	176	1	Intergenic	novelGene_3780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	54564544	54564368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54564400_54564500
ES.4887.1	chr11	+	2082	1	Antisense	novelGene_ENSMUSG00000052298.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATCTCATGTAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	54612893	54614975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_54612900_54615000
ES.4888.1	chr11	+	6790	1	Antisense	novelGene_ENSMUSG00000082503.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGCATTAAAAGTCTTC	NA	False	NA	NA	False	TATAAA	-39	NA	54637617	54644407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_54637600_54644400
ES.4889.1	chr11	+	4066	1	Intergenic	novelGene_3781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACCATGAAGATGTCAT	NA	False	NA	NA	False	NA	NA	NA	54665695	54669761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54665700_54669800
ES.489.1	chr1	+	138	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	55158229	55158367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55158200_55158400
ES.4890.1	chr11	-	3182	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-70	-43	-70	43	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAGAATCTTCTAGCA	NA	False	NA	31	True	AATAAA	-15	NA	54678571	54608238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.10	chr11	-	3238	7	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-71	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	295.365169465415	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678572	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54646651_54646751_54647231_54647386_54678385
ES.4890.11	chr11	-	3144	7	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	297.908636255406	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678495	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54632078_54632161_54647231_54647386_54678385
ES.4890.12	chr11	-	2625	4	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-24	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	263.53536553732	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678525	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54678385
ES.4890.13	chr11	-	3077	6	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	255.535046520042	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678504	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611190_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.14	chr11	-	3139	7	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	275.440707473193	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678476	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54670038_54670135_54678385
ES.4890.16	chr11	-	3590	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	549	junction_3	70.1547396830749	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678505	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.17	chr11	-	2748	5	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	274.270281838919	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678498	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54647231_54647382_54678385
ES.4890.19	chr11	-	3066	6	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	246.492515099343	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTGTTTGGATTTT	NA	False	NA	-15	True	AATAAA	-10	NA	54678478	54608284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614525_54631063_54631377_54647231_54647386_54678385
ES.4890.2	chr11	-	2987	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-31	41	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAGAGAATCTTCTAG	NA	False	NA	29	True	AATAAA	-13	NA	54678532	54608240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
ES.4890.20	chr11	-	3122	7	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	297.67697817153	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTGTTTGGATTTT	NA	False	NA	-15	True	AATAAA	-10	NA	54678504	54608284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54613985_54614039_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.21	chr11	-	1228	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	-3	1844	-3	-1844	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACAATAGTCCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	54678504	54610125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.22	chr11	-	4633	3	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	35491	-1881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	281.5	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATTTATGTATATTTT	3359	False	NA	NA	False	NA	NA	NA	54615674	54610162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54614039_54614399
ES.4890.23	chr11	-	1231	4	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	63	5509	13	609	5prime_fragment	FALSE	canonical	3	549	junction_2	69.1680722748742	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTACCCTCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	54678438	54613790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.24	chr11	-	2226	1	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	18159	31	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGTGTATTTCGAAGAT	NA	False	NA	NA	False	NA	NA	NA	54633006	54630780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54630800_54633000
ES.4890.25	chr11	-	4057	2	NNC	ENSMUSG00000052298.13	novel	801	3	NA	NA	424	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	54650741	54630806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54631377_54647254
ES.4890.26	chr11	-	835	3	FSM	ENSMUSG00000052298.13	ENSMUST00000136059.8	801	3	-30	-4	4	4	multi-exon	FALSE	canonical	3	549	junction_1	84	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	54678497	54630807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54631377_54647231_54647386_54678385
ES.4890.27	chr11	-	174	1	Intergenic	novelGene_3782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54671952	54671778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54671800_54672000
ES.4890.3	chr11	-	3091	6	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-4	41	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	255.016391630028	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATAGAGAATCTTCTAG	NA	False	NA	29	True	AATAAA	-13	NA	54678505	54608240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647254_54647386_54678385
ES.4890.4	chr11	-	3079	6	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	395	5	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	232.555369750948	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGATTTTTCTTCTAA	NA	False	NA	-7	True	AATAAA	-18	NA	54678056	54608276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54677935
ES.4890.5	chr11	-	3228	7	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	272.413085017752	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGATTTTTCTTCTA	NA	False	NA	-8	True	AATAAA	-17	NA	54678497	54608277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54651006_54651166_54678385
ES.4890.6	chr11	-	3239	7	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	286.486619815539	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTTGGATTTTTCTT	NA	False	NA	-11	True	AATAAA	-14	NA	54678480	54608280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54625557_54625748_54631063_54631377_54647231_54647386_54678385
ES.4890.8	chr11	-	6269	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-13	0	intron_retention	FALSE	canonical	3	549	junction_3	68.4155501329924	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678485	54608281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54610551_54611068_54614502_54631063_54631377_54647231_54647386_54678385
ES.4890.9	chr11	-	3204	7	NNC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	286.71743736454	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	False	NA	-13	True	AATAAA	-12	NA	54678474	54608282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54610551_54611068_54611184_54614399_54614502_54627372_54627536_54631063_54631377_54647231_54647386_54678385
ES.4891.1	chr11	+	241	1	Intergenic	novelGene_3783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATAGTTGATCCCATCCC	NA	False	NA	NA	False	NA	NA	NA	54689590	54689831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54689600_54689800
ES.4892.1	chr11	+	157	1	Intergenic	novelGene_3784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	54734782	54734939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54734800_54734900
ES.4893.1	chr11	+	255	1	Intergenic	novelGene_3785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54734991	54735246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54735000_54735200
ES.4893.2	chr11	+	135	1	Intergenic	novelGene_3786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	54734993	54735128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54735000_54735100
ES.4894.1	chr11	+	1232	1	Intergenic	novelGene_3787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACAAACAAAAAAGAGACAG	NA	False	NA	NA	False	NA	NA	NA	54748659	54749891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54748700_54749900
ES.4895.1	chr11	-	3986	1	NIC	ENSMUSG00000020268.15	novel	1501	8	NA	NA	9044	902	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACAATGTGATGTGGT	NA	False	NA	NA	False	TTTAAA	-16	NA	54732268	54728282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54728300_54732300
ES.4895.10	chr11	-	387	5	NIC	ENSMUSG00000020268.15	novel	3431	5	NA	NA	2	21	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	62.9503772824278	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACATGCACATGTTTCT	NA	False	NA	NA	False	AATACA	-16	NA	54751409	54731896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54732029_54739404_54739487_54741170_54741239_54744052_54744126_54751377
ES.4895.11	chr11	-	239	1	Intergenic	novelGene_3788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTCCTTTCTCTAC	NA	False	NA	NA	False	NA	NA	NA	54749638	54749399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54749400_54749600
ES.4895.2	chr11	-	3126	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	316	-11	-8	11	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAGTCAAATTGTAAC	NA	False	NA	NA	False	NA	NA	NA	54751422	54729173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4895.3	chr11	-	2733	6	NNC	ENSMUSG00000020268.15	novel	3431	5	NA	NA	2	-22	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.8937593301544	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	54751409	54729206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54729807_54730153_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4895.4	chr11	-	3004	4	FSM	ENSMUSG00000020268.15	ENSMUST00000124351.2	279	4	26	-2751	2	-22	multi-exon	FALSE	canonical	0	0	junction_3	82.0460575259747	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	54751409	54729206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741239_54751377
ES.4895.5	chr11	-	2889	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	318	224	-6	-224	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGATTTCATTCCAATAC	NA	False	NA	NA	False	NA	NA	NA	54751420	54729408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4895.6	chr11	-	1662	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	317	1452	-7	2	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGTGATTTCCTGTTT	NA	False	NA	0	True	AATAAA	-29	NA	54751421	54730636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4895.7	chr11	-	411	1	ISM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	20302	1841	9876	-387	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAACAATTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	54731436	54731025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_54731000_54731400
ES.4895.8	chr11	-	800	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	317	2314	-7	419	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAACGTTCCCCTTTT	NA	False	NA	NA	False	NA	NA	NA	54751421	54731498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4895.9	chr11	-	660	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	324	2447	0	286	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAGTTGGTAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54751414	54731631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ES.4896.1	chr11	+	675	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	-35	-4	-35	4	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTACTCTGGAATCTG	NA	False	NA	38	True	AATAAA	-27	NA	54757173	54761331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54757427_54760673_54760779_54761014
ES.4896.2	chr11	+	680	1	Genic_Genomic	ENSMUSG00000020267.7	novel	NA	NA	NA	NA	-2	-3247	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACTGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	54757206	54757886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_54757200_54757900
ES.4896.3	chr11	+	3853	2	NIC	ENSMUSG00000020267.7	novel	636	3	NA	NA	23	-7	intron_retention	FALSE	canonical	3	4351	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTGGATTTGTTAC	NA	False	NA	27	True	AATAAA	-16	NA	54757231	54761320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54760779_54761014
ES.4896.5	chr11	+	4055	1	NIC	ENSMUSG00000020267.7	novel	636	3	NA	NA	-44	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTATGAGTGGATTTGT	NA	False	NA	24	True	AATAAA	-13	NA	54757262	54761317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_54757300_54761300
ES.4896.6	chr11	+	551	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	-36	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2175.5	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTATGAGTGGATTTGT	NA	False	NA	24	True	AATAAA	-13	NA	54757270	54761317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54757414_54760673_54760779_54761014
ES.4896.7	chr11	+	805	2	FSM	ENSMUSG00000020267.7	ENSMUST00000117710.2	580	2	-35	-190	-35	-4	multi-exon	FALSE	canonical	3	4806	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGGATTTGTTACTCT	NA	False	NA	30	True	AATAAA	-19	NA	54757271	54761323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54757427_54760673
ES.4897.1	chr11	+	174	1	Intergenic	novelGene_3789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAAAAGCATG	NA	False	NA	NA	False	NA	NA	NA	54769254	54769428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54769300_54769400
ES.4898.1	chr11	+	200	1	Intergenic	novelGene_3790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGAGATCTCTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	54770025	54770225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54770000_54770200
ES.4899.1	chr11	+	1614	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	-20	0	-20	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793577	54801203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
ES.49.1	chr1	+	4859	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTAAAGCCTTAAAAAAAA	NA	False	NA	NA	False	CATAAA	-32	NA	7455208	7460067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7455200_7460100
ES.49.2	chr1	+	3492	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATTAAAAAATTCTTTAAA	NA	False	NA	NA	False	AAAACA	-34	NA	7456346	7459838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_7456300_7459800
ES.490.1	chr1	+	2139	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	-68	769	-68	192	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAAGTGCAGACTTAC	NA	False	NA	NA	False	NA	NA	NA	55170321	55193289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.10	chr1	+	2435	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	58	347	2	-346	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTAGGTGTTTATATT	NA	False	NA	NA	False	AATAGA	-9	NA	55170447	55193711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.11	chr1	+	861	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	58	1921	2	-21	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTATATTCACTGGTGT	NA	False	NA	-85	True	AATACA	-17	NA	55170447	55192137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.12	chr1	+	1953	9	NNC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	2	2817	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	167.914971041894	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTAAGGCCAGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	55170447	55196875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833_55193148_55196793
ES.490.13	chr1	+	2055	9	NNC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	8	177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	215.382762483445	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	55170453	55193274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55170519_55173524_55173588_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.14	chr1	+	1866	6	ISM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	13891	-177	-2508	177	3prime_fragment	FALSE	canonical	3	402	junction_5	46.2644571998851	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	55184280	55193274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.2	chr1	+	1975	7	FSM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	13	-172	13	172	multi-exon	FALSE	canonical	3	33	junction_1	175.833886255055	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55170402	55193269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.3	chr1	+	2809	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	24	7	-5	-6	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCAGTTTGTATTC	NA	False	NA	6	True	CATAAA	-6	NA	55170413	55194051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.4	chr1	+	2488	7	NIC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	8	74	intron_retention	FALSE	canonical	3	402	junction_6	41.6039528036566	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTGCTAAACAATCAT	NA	False	NA	10	True	AATAAA	-18	NA	55170426	55192232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55189385_55190129_55190242_55191833
ES.490.5	chr1	+	981	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	43	1816	-8	84	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCATTGGACCCCAG	NA	False	NA	20	True	AATAAA	-28	NA	55170432	55192242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.6	chr1	+	914	7	NIC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	-1	72	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	185.331609704215	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGCTGCTAAACAATC	NA	False	NA	8	True	AATAAA	-16	NA	55170444	55192230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_55170519_55175835_55175899_55184282_55184384_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.7	chr1	+	2838	9	NNC	ENSMUSG00000025979.14	novel	2840	8	NA	NA	1	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	216.596074237277	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCACCCTCCCTGTAGT	NA	False	NA	22	True	AATAAA	-22	NA	55170446	55194005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_55170519_55175835_55175899_55181420_55181529_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.490.8	chr1	+	2709	7	FSM	ENSMUSG00000025979.14	ENSMUST00000162930.8	3555	7	28	818	1	142	multi-exon	FALSE	canonical	3	402	junction_6	41.4544596180221	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55170446	55193239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55190242_55191833
ES.490.9	chr1	+	1668	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	57	1115	1	-154	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATAGTGTATTAAT	NA	False	NA	NA	False	ATTAAA	-9	NA	55170446	55192943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ES.4900.1	chr11	+	3888	1	Antisense	novelGene_ENSMUSG00000020400.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAGTAACGG	NA	False	NA	NA	False	NA	NA	NA	54842483	54846371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_54842500_54846400
ES.4901.1	chr11	-	6099	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	-3	-3454	-2	3452	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGAGTTGGGTCCA	6838	False	NA	NA	False	ATTAAA	-9	NA	54853745	54798158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
ES.4901.10	chr11	-	2907	18	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	69.342188459451	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	6672	False	NA	-7	True	CATAAA	-16	NA	54853911	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
ES.4901.11	chr11	-	2563	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3603	False	NA	-7	True	CATAAA	-16	NA	54846927	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ES.4901.13	chr11	-	2638	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	64.3996312101242	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3602	False	NA	-7	True	CATAAA	-16	NA	54846928	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ES.4901.14	chr11	-	3080	18	NNC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	94.5780284220792	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3603	False	NA	-7	True	CATAAA	-16	NA	54846927	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54838290_54838734_54846846
ES.4901.15	chr11	-	2669	17	NIC	ENSMUSG00000020400.18	novel	2686	18	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	70.9101268772663	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3670	False	NA	-7	True	CATAAA	-16	NA	54846860	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846673
ES.4901.17	chr11	-	2662	18	NNC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	117.064055455057	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	6847	False	NA	-7	True	CATAAA	-16	NA	54853736	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814919_54815056_54815201_54815268_54816755_54816859_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828887_54830423_54830562_54853658
ES.4901.18	chr11	-	2726	17	NIC	ENSMUSG00000020400.18	novel	2686	18	NA	NA	30	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	78.5163199596109	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3687	False	NA	-7	True	CATAAA	-16	NA	54846843	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846673
ES.4901.19	chr11	-	2919	18	NNC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	-918	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	77.6590899769973	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	5922	False	NA	-7	True	CATAAA	-16	NA	54854661	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54854470
ES.4901.2	chr11	-	2876	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	-37	-5	-37	5	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGCTAATTCTTTTAT	3545	False	NA	2	True	CATAAA	-25	NA	54846985	54801605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ES.4901.22	chr11	-	2839	19	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	92.9206650858677	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3626	False	NA	-7	True	CATAAA	-16	NA	54846904	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54843175_54843229_54846846
ES.4901.24	chr11	-	6728	17	NIC	ENSMUSG00000020400.18	novel	2810	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_16	70.6567406550854	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	6850	False	NA	-7	True	CATAAA	-16	NA	54853733	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
ES.4901.25	chr11	-	2614	18	NIC	ENSMUSG00000020400.18	novel	2686	18	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	90.1220625550123	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGTGACTGGCTAA	3605	False	NA	-7	True	CATAAA	-16	NA	54846925	54801614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54843175_54843229_54846846
ES.4901.28	chr11	-	2504	17	NNC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.6764698248485	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	3608	False	NA	-9	True	CATAAA	-14	NA	54846922	54801616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809512_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ES.4901.29	chr11	-	4010	15	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	13	-2	intron_retention	FALSE	canonical	3	81	junction_14	57.0894393179041	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	3630	False	NA	-9	True	CATAAA	-14	NA	54846900	54801616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
ES.4901.3	chr11	-	2744	18	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3596	False	NA	-5	True	CATAAA	-18	NA	54846934	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ES.4901.31	chr11	-	2763	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	-125	4	-124	-2	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	6716	False	NA	-9	True	CATAAA	-14	NA	54853867	54801616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
ES.4901.32	chr11	-	2630	17	NNC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	92.25	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	3685	False	NA	-9	True	CATAAA	-14	NA	54846845	54801616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827346_54828772_54828892_54830423_54830562_54846673
ES.4901.33	chr11	-	2758	18	NNC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.7400957765649	258	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATTTTGTGACTGGCT	3642	False	NA	-9	True	CATAAA	-14	NA	54846888	54801616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802398_54806322_54806414_54807621_54807804_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ES.4901.36	chr11	-	3951	3	NIC	ENSMUSG00000020400.18	novel	941	8	NA	NA	-13317	937	intron_retention	FALSE	canonical	3	231	junction_1	21.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATACTGCTTTTCAGATA	NA	False	NA	NA	False	NA	NA	NA	54825218	54816592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54820045_54821590_54821686_54824814
ES.4901.37	chr11	-	5855	1	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	-10567	916	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54822468	54816613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54816600_54822500
ES.4901.38	chr11	-	176	1	Intergenic	novelGene_3791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAATCTCAGA	NA	False	NA	NA	False	NA	NA	NA	54824256	54824080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54824100_54824300
ES.4901.4	chr11	-	3988	16	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	81	junction_15	54.0274004556947	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3585	False	NA	-5	True	CATAAA	-18	NA	54846945	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54828892_54830423_54830562_54846846
ES.4901.5	chr11	-	3420	17	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	-851	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	68.3266225109218	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	5989	False	NA	-5	True	CATAAA	-18	NA	54854594	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
ES.4901.6	chr11	-	2973	18	FSM	ENSMUSG00000020400.18	ENSMUST00000018482.13	2810	18	-163	0	-158	0	multi-exon	FALSE	canonical	3	7	junction_17	76.4117873477302	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6682	False	NA	-5	True	CATAAA	-18	NA	54853901	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
ES.4901.7	chr11	-	4213	16	NIC	ENSMUSG00000020400.18	novel	2973	19	NA	NA	3	0	intron_retention	FALSE	canonical	3	179	junction_15	42.3806035298644	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3603	False	NA	-5	True	CATAAA	-18	NA	54846927	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802324_54806322_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ES.4901.8	chr11	-	2894	18	NIC	ENSMUSG00000020400.18	novel	2810	18	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	76.5890485183174	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3693	False	NA	-5	True	CATAAA	-18	NA	54846837	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846673
ES.4901.9	chr11	-	3320	18	NNC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	70.3454156903669	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3867	False	NA	-5	True	CATAAA	-18	NA	54846663	54801612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54845999
ES.4902.1	chr11	-	182	1	Intergenic	novelGene_3792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGAGAGAAAACCTCA	1828	False	NA	NA	False	NA	NA	NA	54858755	54858573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_54858600_54858800
ES.4903.1	chr11	+	2763	1	Antisense	novelGene_ENSMUSG00000018340.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGGCTGGAGTGATGC	4392	False	NA	NA	False	NA	NA	NA	54870828	54873591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_54870800_54873600
ES.4904.1	chr11	-	2794	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	-11	-312	-11	312	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTTGAACCGTATTCA	NA	False	NA	NA	False	NA	NA	NA	54924282	54869621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.10	chr11	-	2377	24	NIC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	138.51551611339	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	-7	True	NA	NA	NA	54924259	54869936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.12	chr11	-	1282	10	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	38868	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	190.420846457083	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	-7	True	NA	NA	NA	54885373	54869936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54878070_54882216_54882271_54883112_54883193_54885109_54885201_54885292
ES.4904.13	chr11	-	2439	26	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-401	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_25	128.995193708913	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	-7	True	NA	NA	NA	54924672	54869936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924632
ES.4904.17	chr11	-	4465	24	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	5	-4	intron_retention	FALSE	canonical	3	9	junction_11	129.854404436688	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGAGTGATGTGTGTGC	NA	False	NA	-8	True	NA	NA	NA	54924236	54869937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.18	chr11	-	2649	26	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	163.226684093012	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAGTGATGTGTGTG	NA	False	NA	-9	True	NA	NA	NA	54924271	54869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872102_54872286_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.19	chr11	-	2424	25	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-14	-5	combination_of_known_splicesites	FALSE	canonical	2	18	junction_24	127.335453461844	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAGTGATGTGTGTG	NA	False	NA	-9	True	NA	NA	NA	54924255	54869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54924184
ES.4904.2	chr11	-	2753	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	16	-280	-14	280	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGACCTTCTAGACTG	NA	False	NA	NA	False	NA	NA	NA	54924255	54869653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.21	chr11	-	2480	25	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	122.14460919564	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGAGTGATGTGTGTG	NA	False	NA	-9	True	NA	NA	NA	54924265	54869938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882196_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.22	chr11	-	4006	22	NIC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	-13	-6	intron_retention	FALSE	canonical	3	9	junction_9	143.807048228456	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	False	NA	-10	True	NA	NA	NA	54924254	54869939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.23	chr11	-	3577	24	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	9	junction_12	132.311755925706	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	False	NA	-10	True	NA	NA	NA	54924272	54869939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.24	chr11	-	2515	27	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	158.171093043439	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	False	NA	-10	True	NA	NA	NA	54924254	54869939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872236_54872286_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.25	chr11	-	2399	25	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-11	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	130.827912573477	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	False	NA	-10	True	NA	NA	NA	54924282	54869939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54904650_54904742_54912362_54912407_54924184
ES.4904.27	chr11	-	2863	24	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	173.944258068307	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	False	NA	-10	True	NA	NA	NA	54924261	54869939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876460_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.29	chr11	-	2420	25	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	172.452227684461	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATGAGTGATGTGTG	NA	False	NA	-11	True	NA	NA	NA	54924255	54869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889434_54890620_54890680_54892058_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.3	chr11	-	2623	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	19	-153	-11	153	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGGTTTCATTTTGT	NA	False	NA	NA	False	GATAAA	-22	NA	54924252	54869780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.30	chr11	-	2866	27	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	161.769139324748	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATGAGTGATGTGTG	NA	False	NA	-11	True	NA	NA	NA	54924253	54869940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54917275_54917678_54924184
ES.4904.31	chr11	-	2522	26	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	188.859075503403	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGAAATGAGTGATGTG	NA	False	NA	-13	True	NA	NA	NA	54924273	54869942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877626_54877746_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.32	chr11	-	1311	13	ISM	ENSMUSG00000018340.14	ENSMUST00000148298.2	2096	20	-41	8635	-11	-8635	5prime_fragment	FALSE	canonical	3	438	junction_8	50.195451321144	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGAGGTCGATCTGGT	NA	False	NA	NA	False	NA	NA	NA	54924282	54890410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.33	chr11	-	7725	6	NIC	ENSMUSG00000018340.14	novel	2096	20	NA	NA	-12	-11794	intron_retention	FALSE	canonical	3	438	junction_2	62.3878193239674	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	54924253	54893569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54898764_54899935_54900027_54901817_54901932_54902528_54904742_54912362_54912407_54924184
ES.4904.4	chr11	-	2704	27	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	207.71914712621	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924254	54869933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872102_54872286_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54890965_54891033_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.5	chr11	-	2522	25	NNC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	-604	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	130.300394121942	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924875	54869933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904711_54924680
ES.4904.6	chr11	-	2531	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	-44	2	-44	-2	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGATGTGTGTGCTT	NA	False	NA	-6	True	NA	NA	NA	54924315	54869935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.7	chr11	-	2529	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	-60	2	-60	-2	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTGATGTGTGTGCTT	NA	False	NA	-6	True	NA	NA	NA	54924331	54869935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.8	chr11	-	2398	25	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	130.073269950269	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	-7	True	NA	NA	NA	54924262	54869936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4904.9	chr11	-	2482	25	NNC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	122.14460919564	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTGATGTGTGTGCT	NA	False	NA	-7	True	NA	NA	NA	54924273	54869936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882204_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ES.4905.1	chr11	+	247	1	Intergenic	novelGene_3793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTATTTATTGG	NA	False	NA	NA	False	AATAGA	-5	NA	54977113	54977360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_54977100_54977400
ES.4906.1	chr11	+	2012	4	NNC	ENSMUSG00000000594.8	novel	4127	4	NA	NA	-10856	-2131	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	157.234432191765	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54978084	55001724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54978231_54994412_54994575_54999723_54999907_55000203
ES.4906.2	chr11	+	2145	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	-148	2130	-148	-2130	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGCTCCTTTTCTTGG	NA	False	NA	23	True	AATAAA	-16	NA	54988792	55001725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ES.4906.3	chr11	+	1969	5	NNC	ENSMUSG00000000594.8	novel	4127	4	NA	NA	-35	-2131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	149.824063487812	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988905	55001724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203_55001462_55001523
ES.4906.4	chr11	+	1628	5	NNC	ENSMUSG00000000594.8	novel	4127	4	NA	NA	7	-2131	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	149.824063487812	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988947	55001724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203_55000732_55001092
ES.4906.5	chr11	+	2205	3	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	5133	2131	5133	-2131	3prime_fragment	FALSE	canonical	3	325	junction_2	11	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54994073	55001724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54994575_54999723_54999907_55000203
ES.4906.6	chr11	+	4897	2	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	7590	2131	7590	-2131	3prime_fragment	FALSE	canonical	3	325	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54996530	55001724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_54999907_55000203
ES.4907.1	chr11	+	3117	1	FSM	ENSMUSG00000080738.2	ENSMUST00000121611.2	243	1	-2670	-204	-2670	204	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTATAATGGTCATGGTG	NA	False	NA	NA	False	AATAAA	-27	NA	55011850	55014967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55011800_55015000
ES.4907.2	chr11	+	159	1	Intergenic	novelGene_3794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAACAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	55012845	55013004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_55012800_55013000
ES.4908.1	chr11	+	3118	4	NNC	ENSMUSG00000085531.2	novel	520	2	NA	NA	-7250	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	55020619	55031019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55022773_55023498_55023588_55024228_55024709_55030623
ES.4908.2	chr11	+	972	3	NNC	ENSMUSG00000085531.2	novel	520	2	NA	NA	-5584	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	55022285	55031019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55022773_55023498_55023588_55030623
ES.4909.1	chr11	-	1191	7	NNC	ENSMUSG00000049491.16	novel	1841	12	NA	NA	13851	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCCAGCATCTTTCT	4768	False	NA	NA	False	NA	NA	NA	55028661	55015650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55015988_55016428_55016599_55020373_55020541_55022364_55022461_55026084_55026304_55028114_55028200_55028544
ES.4909.2	chr11	-	1426	5	NNC	ENSMUSG00000049491.16	novel	1768	11	NA	NA	4667	-9605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.92028643696715	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATATATGATGAAGGA	NA	False	NA	NA	False	AATAAA	-29	NA	55037845	55025255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55026304_55028114_55028200_55033588_55033685_55036971_55037061_55037737
ES.491.1	chr1	-	3200	1	Antisense	novelGene_ENSMUSG00000025979.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55189988	55186788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_55186800_55190000
ES.4910.2	chr11	-	2302	10	FSM	ENSMUSG00000020264.6	ENSMUST00000039305.6	2429	10	103	24	103	-24	multi-exon	FALSE	canonical	0	0	junction_1	0.628539361054709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCGATGATGGCTTCC	2332	False	NA	NA	False	AGTAAA	-14	NA	55075800	55049319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55050442_55053471_55053642_55055058_55055226_55059655_55059755_55060679_55060899_55065493_55065579_55070150_55070247_55071532_55071622_55072370_55072462_55075636
ES.4910.3	chr11	-	1599	10	FSM	ENSMUSG00000020264.6	ENSMUST00000039305.6	2429	10	34	796	34	-796	multi-exon	FALSE	canonical	0	0	junction_1	0.628539361054709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	2263	False	NA	NA	False	NA	NA	NA	55075869	55050091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55050442_55053471_55053642_55055058_55055226_55059655_55059755_55060679_55060899_55065493_55065579_55070150_55070247_55071532_55071622_55072370_55072462_55075636
ES.4911.1	chr11	+	5266	12	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	-30	11	intron_retention	TRUE	canonical	0	0	junction_11	18.7880742902829	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTTTGTTTTCACAC	NA	False	NA	35	True	AATAAA	-35	NA	55095145	55127167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
ES.4911.10	chr11	+	5085	11	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	134	-2	intron_retention	FALSE	canonical	0	0	junction_10	19.7027916803685	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTTGCAAACTGTGTC	1038	False	NA	22	True	AATAAA	-22	NA	55104754	55127154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
ES.4911.11	chr11	+	4714	8	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	6626	0	intron_retention	TRUE	non_canonical	0	0	junction_7	20.872792563233	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	839	False	NA	24	True	AATAAA	-24	NA	55111246	55127156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55126994_55127034
ES.4911.12	chr11	+	5855	5	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	12479	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	29.8778764305631	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	6692	False	NA	23	True	AATAAA	-23	NA	55117099	55127155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55118298_55118406_55118779_55118821_55119183_55123192_55127000_55127038
ES.4911.13	chr11	+	7724	3	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	14725	0	intron_retention	TRUE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	8938	False	NA	24	True	AATAAA	-24	NA	55119345	55127156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55121842_55121889_55127000_55127038
ES.4911.15	chr11	+	2988	2	ISM	ENSMUSG00000020261.16	ENSMUST00000020499.14	1950	12	28171	-2492	18752	-1	3prime_fragment	FALSE	canonical	2	5	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	NA	False	NA	23	True	AATAAA	-23	NA	55123372	55127155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55123533_55124327
ES.4911.16	chr11	+	3200	1	ISM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	28781	0	19336	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	19	False	NA	24	True	AATAAA	-24	NA	55123956	55127156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55124000_55127200
ES.4911.2	chr11	+	4979	11	FSM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	-7	292	-7	-292	multi-exon	FALSE	canonical	3	47	junction_5	8.1516869419771	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTCAGTATATGTTGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	55095168	55126864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192
ES.4911.3	chr11	+	5082	11	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_1	24.2983538537079	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTGCAAACTGTGTCT	NA	False	NA	23	True	AATAAA	-23	NA	55095172	55127155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
ES.4911.4	chr11	+	5024	11	NNC	ENSMUSG00000020261.16	novel	5264	11	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	24.5267201231636	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGTTGCAAACTGTGT	NA	False	NA	21	True	AATAAA	-21	NA	55095175	55127153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109873_55111258_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55127000_55127038
ES.4911.5	chr11	+	4182	12	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	0	-296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3216814669586	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTGTCAGTATATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	55095175	55126860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115889_55116791_55116959_55119012_55119183_55123192_55123533_55124327
ES.4911.6	chr11	+	5225	12	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_8	24.2084610575902	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAGAGGTTGCAAACT	NA	False	NA	17	True	AATAAA	-17	NA	55095177	55127149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115889_55116791_55116959_55119012_55119183_55123192_55127000_55127038
ES.4911.7	chr11	+	4424	13	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	22.5314594881616	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTTGCAAACTGTGTC	NA	False	NA	22	True	AATAAA	-22	NA	55095179	55127154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327_55127000_55127038
ES.4911.8	chr11	+	2032	12	FSM	ENSMUSG00000020261.16	ENSMUST00000020499.14	1950	12	-18	-64	-4	64	multi-exon	FALSE	canonical	2	5	junction_11	17.4895482366087	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCTGCCCCTATTATG	NA	False	NA	NA	False	ACTAAA	-14	NA	55095183	55124727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327
ES.4911.9	chr11	+	4724	13	NNC	ENSMUSG00000020261.16	novel	1950	12	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.2555549677905	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAGGTTGCAAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	55095196	55127151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55095315_55104755_55104901_55109833_55109925_55110085_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327_55127000_55127038
ES.4912.1	chr11	-	1634	1	Antisense	novelGene_ENSMUSG00000020261.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	3920	False	NA	NA	False	NA	NA	NA	55105817	55104183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_55104200_55105800
ES.4913.1	chr11	+	155	1	Intergenic	novelGene_3795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	4744	False	NA	NA	False	NA	NA	NA	55128681	55128836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_55128700_55128800
ES.4914.1	chr11	+	6138	1	Antisense	novelGene_ENSMUSG00000055333.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55171335	55177473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_55171300_55177500
ES.4915.1	chr11	-	11522	23	NNC	ENSMUSG00000055333.15	novel	14528	24	NA	NA	2906	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	3.40757542072569	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGTCGCTTAGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	55200177	55141434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55143325_55144349_55144808_55146929_55147084_55147329_55147772_55151271_55151418_55152887_55153699_55156687_55156886_55158402_55158547_55159000_55159139_55160079_55160295_55160911_55161296_55163820_55164055_55166809_55166964_55169712_55169910_55171863_55175923_55176704_55176916_55178480_55178763_55180043_55180184_55182699_55182911_55186899_55187212_55189379_55189443_55194463_55194779_55199813
ES.4915.2	chr11	-	8795	15	NNC	ENSMUSG00000055333.15	novel	14423	23	NA	NA	27829	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.30815319340269	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTGTCGCTTAGA	9801	False	NA	NA	False	AATAAA	-19	NA	55175254	55141436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55143325_55144508_55144808_55146929_55147084_55147329_55147772_55151271_55151418_55152887_55153699_55156687_55156886_55158402_55158547_55159000_55159139_55160079_55160295_55160911_55161296_55163820_55164055_55166809_55166964_55169712_55169910_55171863
ES.4916.1	chr11	+	159	1	Intergenic	novelGene_3796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55246929	55247088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_55246900_55247100
ES.4917.1	chr11	+	177	1	Intergenic	novelGene_3797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGTGAGCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	55260699	55260876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_55260700_55260900
ES.4918.11	chr11	-	2070	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	-8009	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	233.900158081642	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	9708	False	NA	-2	True	AATAAA	-22	NA	55301000	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55300937
ES.4918.12	chr11	-	2076	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	226.748242401344	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3913	False	NA	-2	True	AATAAA	-22	NA	55310669	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298032_55298106_55300753_55300824_55310613
ES.4918.13	chr11	-	2453	12	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	307.494218181214	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	555	False	NA	-2	True	AATAAA	-22	NA	55314027	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310904_55311027_55312068_55312192_55313826
ES.4918.15	chr11	-	2449	13	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_12	285.938549633775	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	627	False	NA	-2	True	AATAAA	-22	NA	55313955	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904_55311027_55312068_55312192_55313826
ES.4918.16	chr11	-	2063	13	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.246055325891	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	627	False	NA	-2	True	AATAAA	-22	NA	55313955	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285752_55286021_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310904_55311027_55312068_55312144_55313826
ES.4918.17	chr11	-	652	4	NNC	ENSMUSG00000018593.14	novel	2115	10	NA	NA	933	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	347.128218386233	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	NA	False	NA	-2	True	AATAAA	-22	NA	55289467	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285570_55286274_55286440_55286626_55286776_55289373
ES.4918.2	chr11	-	2077	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	-8045	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	235.133899336705	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	9672	False	NA	-2	True	AATAAA	-22	NA	55301036	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55300966
ES.4918.21	chr11	-	2204	10	FSM	ENSMUSG00000018593.14	ENSMUST00000214685.2	1269	10	-16	-919	-16	-2	multi-exon	FALSE	canonical	3	36	junction_9	224.039568815559	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTGTCCCGGGTGAT	557	False	NA	-4	True	AATAAA	-20	NA	55314025	55285327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55313826
ES.4918.24	chr11	-	1837	11	NNC	ENSMUSG00000018593.14	novel	1366	11	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.223013983846	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGGCTGTCCTGTCCCGG	3913	False	NA	-9	True	AATAAA	-15	NA	55310669	55285332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285832_55286050_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.26	chr11	-	1071	8	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	51	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	257.913290285946	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACGGCTGTCCTGTCC	3909	False	NA	-12	True	AATAAA	-12	NA	55310673	55285335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285748_55290013_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.27	chr11	-	2017	11	NNC	ENSMUSG00000018593.14	novel	2115	10	NA	NA	30	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	270.941986410375	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGTAACAACTT	3888	False	NA	-31	True	NA	NA	NA	55310694	55285354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285923_55285961_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
ES.4918.28	chr11	-	2410	13	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	56	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	324.063040420636	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGTAACAACTT	629	False	NA	-31	True	NA	NA	NA	55313953	55285354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310621_55310682_55310904_55311027_55312068_55312192_55313826
ES.4918.30	chr11	-	2377	12	NNC	ENSMUSG00000018593.14	novel	1304	12	NA	NA	-19	-29	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	314.170506951268	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGTAACAACTT	554	False	NA	-31	True	NA	NA	NA	55314028	55285354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310904_55311027_55312068_55312144_55313826
ES.4918.31	chr11	-	2338	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	-8348	-29	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	231.433429086564	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGTAACAACTT	9733	False	NA	-31	True	NA	NA	NA	55301339	55285354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55300979
ES.4918.34	chr11	-	2033	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	51	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	234.140508622019	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAGTAACAACTT	3909	False	NA	-31	True	NA	NA	NA	55310673	55285354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289514_55290013_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.37	chr11	-	1352	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	233	715	51	171	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGACTCTGTGCTTATT	3909	False	NA	NA	False	NA	NA	NA	55310673	55286040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.39	chr11	-	1170	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	213	917	31	4	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAAAGAAACTAGAACC	3889	False	NA	NA	False	AATACA	-32	NA	55310693	55286242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.4	chr11	-	3275	9	NIC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	51	0	intron_retention	FALSE	canonical	3	577	junction_8	70.8603379895975	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3909	False	NA	-2	True	AATAAA	-22	NA	55310673	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.40	chr11	-	1075	10	NNC	ENSMUSG00000018593.14	novel	2115	10	NA	NA	51	39	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	285.323771040879	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGGTGCTAACATAGAT	3909	False	NA	NA	False	TTTAAA	-31	NA	55310673	55286306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310621
ES.4918.41	chr11	-	3316	3	ISM	ENSMUSG00000018593.14	ENSMUST00000130642.2	741	5	-995	1205	-995	-1205	5prime_fragment	FALSE	canonical	3	737	junction_1	5	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGAAGGGAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	55293986	55287550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_55289523_55290017_55290152_55292776
ES.4918.42	chr11	-	5843	6	NIC	ENSMUSG00000018593.14	novel	640	7	NA	NA	-48	-1233	intron_retention	FALSE	canonical	3	577	junction_5	83.1778816753589	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAACAACAAAGAAAAG	3808	False	NA	NA	False	NA	NA	NA	55310774	55287578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55300824_55310613
ES.4918.5	chr11	-	2099	10	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	235.133899336705	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3863	False	NA	-2	True	AATAAA	-22	NA	55310719	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300829_55310632
ES.4918.6	chr11	-	2044	11	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.223013983846	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3888	False	NA	-2	True	AATAAA	-22	NA	55310694	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285586_55285629_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.8	chr11	-	1489	11	NNC	ENSMUSG00000018593.14	novel	2300	10	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	224.223013983846	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3889	False	NA	-2	True	AATAAA	-22	NA	55310693	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55285635_55286232_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ES.4918.9	chr11	-	2040	10	NNC	ENSMUSG00000018593.14	novel	2115	10	NA	NA	2384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	285.554345003919	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	6242	False	NA	-2	True	AATAAA	-22	NA	55308340	55285325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55308304
ES.4919.1	chr11	+	3319	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-936	4320	-936	-4320	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGGAACTGTAGAATTT	NA	False	NA	45	True	AATAAA	-32	NA	55359574	55391344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.10	chr11	+	2790	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-48	-4322	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGGGAACTGTAGAAT	NA	False	NA	43	True	AATAAA	-30	NA	55360462	55391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.100	chr11	+	2129	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2136.91935518833	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382885_55384288_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.101	chr11	+	7535	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3962	intron_retention	FALSE	canonical	3	6361	junction_4	611.195639198285	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTTCATCTGGCAA	NA	False	NA	10	True	ATTAAA	-11	NA	55360560	55391702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.102	chr11	+	2212	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4328	combination_of_known_splicesites	FALSE	canonical	3	121	junction_1	2170.29634842802	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATGTGGGGGAACTG	NA	False	NA	37	True	AATAAA	-24	NA	55360560	55391336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.103	chr11	+	4991	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4513	intron_retention	FALSE	canonical	3	6361	junction_5	589.448539099821	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55380019_55382789_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.104	chr11	+	1502	7	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2810.79975273942	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376567_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.105	chr11	+	4367	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4689	intron_retention	FALSE	canonical	3	6524	junction_3	563.744119347391	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTTCTTTTGACATG	NA	False	NA	26	True	AATAAA	-13	NA	55360560	55390975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.107	chr11	+	2588	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3955	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	2183.19729067256	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360560	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.108	chr11	+	1788	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4514	combination_of_known_splicesites	FALSE	canonical	2	481	junction_8	2211.58833971763	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55390284
ES.4919.109	chr11	+	2212	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2683.97084947533	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55364568_55364641_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.11	chr11	+	2449	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-33	-4333	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	3252.64987966265	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCAAAGTATGTGGGGG	NA	False	NA	32	True	AATAAA	-19	NA	55360477	55391331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55384571_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.111	chr11	+	3955	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4327	intron_retention	FALSE	canonical	3	262	junction_2	2281.88921621137	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360560	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.112	chr11	+	2749	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2670.74527675953	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360560	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55389665_55389717_55390284
ES.4919.114	chr11	+	2124	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2085.25600227917	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382833_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.115	chr11	+	2192	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2136.95659856073	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAGGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386054_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.116	chr11	+	4197	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4324	intron_retention	FALSE	canonical	2	5	junction_6	2835.66251241179	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGGGGAACTGTAGA	NA	False	NA	41	True	AATAAA	-28	NA	55360560	55391340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55384571_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.117	chr11	+	3776	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4335	intron_retention	FALSE	canonical	3	6361	junction_6	582.565361139847	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTCAAAGTATGTGGG	NA	False	NA	30	True	AATAAA	-17	NA	55360560	55391329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.118	chr11	+	3500	11	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	50	3944	17	-3944	intron_retention	FALSE	canonical	3	6361	junction_7	551.255294759152	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGACTGCTAAAACTC	NA	False	NA	28	True	ATTAAA	-29	NA	55360560	55391720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.119	chr11	+	2049	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4475	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	2229.36565865719	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360560	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55389383_55389494_55390284
ES.4919.12	chr11	+	2703	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-33	-3951	combination_of_known_splicesites	FALSE	canonical	3	262	junction_2	2165.33416358769	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCAATGTAGACTGCT	NA	False	NA	21	True	ATTAAA	-22	NA	55360477	55391713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.120	chr11	+	2704	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2136.89645193233	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360560	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386284_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.123	chr11	+	8909	8	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4475	intron_retention	FALSE	canonical	3	6361	junction_4	490.743085035545	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360560	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.124	chr11	+	4574	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4482	intron_retention	FALSE	canonical	3	6524	junction_3	563.744119347391	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGGACAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	55360560	55391182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.125	chr11	+	3961	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	50	2692	17	-2692	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCTCTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	55360560	55392972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.126	chr11	+	4831	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4324	intron_retention	FALSE	canonical	3	6361	junction_6	567.682379461101	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGGGGAACTGTAGA	NA	False	NA	41	True	AATAAA	-28	NA	55360560	55391340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.127	chr11	+	4465	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-4689	intron_retention	FALSE	canonical	3	6361	junction_6	567.682379461101	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTTCTTTTGACATG	NA	False	NA	26	True	AATAAA	-13	NA	55360561	55390975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.128	chr11	+	3309	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-5054	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTCATTTCGCTTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	55360561	55390610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.129	chr11	+	2828	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-4516	intron_retention	FALSE	canonical	3	6524	junction_3	561.314715645332	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGTAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	55360561	55391148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.13	chr11	+	4554	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-33	-4475	intron_retention	FALSE	canonical	3	13	junction_8	2437.68616917252	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360477	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.130	chr11	+	2367	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-4323	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGGGAACTGTAGAA	NA	False	NA	42	True	AATAAA	-29	NA	55360561	55391341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376413_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.131	chr11	+	2968	11	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	51	4475	18	-4475	intron_retention	FALSE	canonical	3	6361	junction_7	551.255294759152	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360561	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.132	chr11	+	2164	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-4477	at_least_one_novel_splicesite	FALSE	canonical	1	134	junction_3	2100.3605042787	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGACAAAAAATTCCCACA	NA	False	NA	NA	False	NA	NA	NA	55360561	55391187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379855_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.135	chr11	+	2689	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	18	-3955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2136.91935518833	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360561	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384281_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.138	chr11	+	5194	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-4475	intron_retention	FALSE	canonical	3	6361	junction_6	596.885444934788	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360562	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738
ES.4919.139	chr11	+	3862	11	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-4513	intron_retention	FALSE	canonical	0	0	junction_1	2205.35513013211	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360562	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376467_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.14	chr11	+	2621	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-32	-4475	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360478	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.141	chr11	+	4403	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-4475	intron_retention	FALSE	canonical	3	6361	junction_6	621.641018237661	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360562	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55389494_55390284
ES.4919.142	chr11	+	3805	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-4475	intron_retention	FALSE	canonical	3	262	junction_2	2281.88921621137	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360562	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.143	chr11	+	2674	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-3955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360562	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360606_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.144	chr11	+	6737	7	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-4475	intron_retention	FALSE	canonical	3	6361	junction_5	664.943961715739	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360562	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55386278_55386969_55387072_55388476
ES.4919.145	chr11	+	3358	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	19	-3955	intron_retention	FALSE	canonical	0	0	junction_9	2289.23214254674	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360562	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55389383
ES.4919.146	chr11	+	1857	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	53	4793	20	-4793	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATCAAGTCACGACT	NA	False	NA	-78	True	GATAAA	-14	NA	55360563	55390871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.149	chr11	+	3699	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	23	-4688	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTTCTTTTGACATGT	NA	False	NA	27	True	AATAAA	-14	NA	55360566	55390976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.15	chr11	+	4010	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-32	-4465	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	4891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCCACAAGAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	55360478	55391199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.151	chr11	+	2347	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	91	-4475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360634	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360871_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.152	chr11	+	2610	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	226	-4327	at_least_one_novel_splicesite	FALSE	canonical	1	282	junction_1	2026.11807313419	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360769	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55361121_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.153	chr11	+	5041	11	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	13011	4475	12978	-4475	3prime_fragment	FALSE	canonical	3	6361	junction_6	582.082305176854	4888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55373521	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.154	chr11	+	3138	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	13560	-3955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4899	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55374103	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55374611_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.155	chr11	+	180	1	Intergenic	novelGene_3801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGCTAT	NA	False	NA	NA	False	NA	NA	NA	55374212	55374392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_55374200_55374400
ES.4919.156	chr11	+	3661	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	15924	-4475	intron_retention	FALSE	canonical	0	0	junction_1	2387.23663468874	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55376467	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55378387_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.157	chr11	+	2093	11	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	15966	-4329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2194.46665274276	4742	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTATGTGGGGGAACT	NA	False	NA	36	True	AATAAA	-23	NA	55376509	55391335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388551_55388806_55388868_55389383_55389494_55390284
ES.4919.158	chr11	+	3357	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17795	-4475	intron_retention	FALSE	canonical	3	6361	junction_4	614.866029615395	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55378338	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55378387_55379844_55380019_55382789_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.159	chr11	+	2434	9	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	19332	3959	19299	-3959	3prime_fragment	FALSE	canonical	3	6361	junction_4	595.702723155602	4752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55379842	55391705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.16	chr11	+	2156	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-31	-4465	combination_of_known_splicesites	FALSE	canonical	3	121	junction_1	2170.29634842802	4891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCCACAAGAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	55360479	55391199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.160	chr11	+	6457	6	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	20783	-4327	intron_retention	FALSE	canonical	3	6361	junction_1	573.97128848053	4741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55381326	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.161	chr11	+	1798	7	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	23762	4329	23729	-4329	3prime_fragment	FALSE	canonical	3	6361	junction_2	558.444864482311	4741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTATGTGGGGGAACT	NA	False	NA	36	True	AATAAA	-23	NA	55384272	55391335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.162	chr11	+	4117	1	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	26529	-4475	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4739	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55387072	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55387100_55391200
ES.4919.163	chr11	+	2678	1	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	28119	-4324	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4741	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGGGGAACTGTAGA	NA	False	NA	41	True	AATAAA	-28	NA	55388662	55391340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55388700_55391300
ES.4919.164	chr11	+	2235	1	Genic_Genomic	ENSMUSG00000018583.6	novel	NA	NA	NA	NA	33115	229	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACAGAAATTTTACAT	NA	False	NA	NA	False	AATAAA	-14	NA	55393658	55395893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_55393700_55395900
ES.4919.17	chr11	+	4124	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-3	-4322	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGGGAACTGTAGAAT	NA	False	NA	43	True	AATAAA	-30	NA	55360507	55391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.18	chr11	+	3140	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3924	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCAGTGTTGTGTGTT	NA	False	NA	48	True	AAGAAA	-33	NA	55360510	55391740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.19	chr11	+	4488	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3955	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360510	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.2	chr11	+	2174	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-317	-4475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360193	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360257_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.20	chr11	+	6554	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2046.53471344449	4959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAATGAATTCTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	55360512	55395661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284_55393732_55393875
ES.4919.21	chr11	+	4090	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	2	-4322	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGGGAACTGTAGAAT	NA	False	NA	43	True	AATAAA	-30	NA	55360512	55391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.23	chr11	+	1646	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	11	5046	11	-5046	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGCTTGTGTTCATGGT	NA	False	NA	NA	False	TATAAA	-24	NA	55360521	55390618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.24	chr11	+	2724	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	11	-3962	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2136.89645193233	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTTCATCTGGCAA	NA	False	NA	10	True	ATTAAA	-11	NA	55360521	55391702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386975_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.25	chr11	+	2934	10	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	20	5056	-13	-5056	intron_retention	FALSE	canonical	3	6361	junction_7	577.922802311951	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTTCATTTCGCTTG	NA	False	NA	NA	False	TATAAA	-14	NA	55360530	55390608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738
ES.4919.26	chr11	+	2566	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	15	-4475	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_2	2135.68904242879	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360558	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55377918_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.27	chr11	+	3635	10	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	48	4327	15	-4327	intron_retention	FALSE	canonical	3	6361	junction_7	577.922802311951	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360558	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738
ES.4919.28	chr11	+	2251	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4321	combination_of_known_splicesites	FALSE	canonical	3	262	junction_2	2165.33416358769	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGGAACTGTAGAATT	NA	False	NA	44	True	AATAAA	-31	NA	55360559	55391343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.29	chr11	+	2332	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4683	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTTGACATGTGATTA	NA	False	NA	32	True	AATAAA	-19	NA	55360559	55390981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.3	chr11	+	2687	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-306	-3951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCAATGTAGACTGCT	NA	False	NA	21	True	ATTAAA	-22	NA	55360204	55391713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360257_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.30	chr11	+	2843	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4327	intron_retention	FALSE	canonical	3	6361	junction_7	609.415096629547	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360559	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55389494_55390284
ES.4919.31	chr11	+	2697	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2136.91935518833	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAACTTCATCTGGCA	NA	False	NA	9	True	ATTAAA	-10	NA	55360559	55391701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382887_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.32	chr11	+	7013	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-2	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	4959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGAATTCTCTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	55360559	55395662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.33	chr11	+	2395	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4327	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_3	2085.9475203972	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360559	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378455_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.35	chr11	+	3215	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3955	intron_retention	FALSE	canonical	3	6361	junction_7	609.415096629547	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360559	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55389494_55390284
ES.4919.36	chr11	+	2586	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3955	combination_of_known_splicesites	FALSE	canonical	3	121	junction_1	2170.29634842802	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360559	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.37	chr11	+	5347	8	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_6	638.044269464054	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476
ES.4919.38	chr11	+	2309	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2136.89645193233	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360559	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386260_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.39	chr11	+	2321	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4322	at_least_one_novel_splicesite	FALSE	canonical	1	134	junction_3	2100.3605042787	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGGGAACTGTAGAAT	NA	False	NA	43	True	AATAAA	-30	NA	55360559	55391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379855_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.4	chr11	+	2411	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-173	4465	-173	-4465	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCCACAAGAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	55360337	55391199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.40	chr11	+	2108	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4464	combination_of_known_splicesites	FALSE	canonical	3	262	junction_2	2165.33416358769	4891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCACAAGAAAACAAACCC	NA	False	NA	-99	True	NA	NA	NA	55360559	55391200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.42	chr11	+	1984	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	combination_of_known_splicesites	FALSE	canonical	2	63	junction_1	2304.98888886211	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.43	chr11	+	3890	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.44	chr11	+	6421	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_5	582.234260736175	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.46	chr11	+	2157	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360644_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.47	chr11	+	3704	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4661	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	4878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTCTAAGCCTCCAT	NA	False	NA	54	True	AATAAA	-41	NA	55360559	55391003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.48	chr11	+	2222	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4322	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	2183.19729067256	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGGGGAACTGTAGAAT	NA	False	NA	43	True	AATAAA	-30	NA	55360559	55391342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.49	chr11	+	6773	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	intron_retention	FALSE	canonical	3	6361	junction_5	587.439996935857	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55382881_55384273_55386278_55386969_55387072_55388476_55388868_55389383_55389494_55390284
ES.4919.5	chr11	+	2917	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-156	3942	-156	-3942	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGACTGCTAAAACTCAC	NA	False	NA	30	True	ATTAAA	-31	NA	55360354	55391722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.50	chr11	+	2032	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2046.53471344449	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386139_55386247_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.51	chr11	+	2269	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	2723.06548560421	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55384571_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.52	chr11	+	2247	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_3	2085.9475203972	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378455_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.53	chr11	+	1948	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4514	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	2978.15395633844	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.54	chr11	+	2820	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	intron_retention	FALSE	canonical	1	1	junction_8	2243.77663332314	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388738_55388868_55389383
ES.4919.55	chr11	+	1781	10	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2324.32917177525	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360559	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384360_55388527_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.56	chr11	+	1487	8	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2526.73880319906	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360559	55391705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386187_55390948
ES.4919.57	chr11	+	2443	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2724.16101253619	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360559	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384454_55384571_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.58	chr11	+	2566	11	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-3962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2868.6740857058	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTTCATCTGGCAA	NA	False	NA	10	True	ATTAAA	-11	NA	55360559	55391702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360644_55376511_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.59	chr11	+	7347	7	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6668	junction_2	527.783099388376	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55380019_55382789_55382881_55384273_55387072_55388476_55388589_55388738
ES.4919.6	chr11	+	2181	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-135	4657	-135	-4657	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTAAGCCTCCATTTTT	NA	False	NA	58	True	AATAAA	-45	NA	55360375	55391007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.60	chr11	+	2069	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	2183.19729067256	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.61	chr11	+	3486	10	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	49	4475	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_7	577.922802311951	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738
ES.4919.62	chr11	+	2086	11	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2241.38032471065	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55379855_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.63	chr11	+	3773	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4482	intron_retention	FALSE	canonical	3	13	junction_9	2298.32817392594	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGGACAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	55360559	55391182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.67	chr11	+	4856	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4329	intron_retention	FALSE	canonical	3	6361	junction_6	566.344309182329	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTATGTGGGGGAACT	NA	False	NA	36	True	AATAAA	-23	NA	55360559	55391335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.68	chr11	+	3928	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4327	intron_retention	FALSE	canonical	3	13	junction_9	2298.32817392594	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360559	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.69	chr11	+	4681	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_6	567.682379461101	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.7	chr11	+	2190	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	-115	-4513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2104.20385996641	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360395	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360513_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.71	chr11	+	2695	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	16	-4475	intron_retention	FALSE	canonical	3	6361	junction_7	609.415096629547	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360559	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55389494_55390284
ES.4919.72	chr11	+	2131	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4327	combination_of_known_splicesites	FALSE	canonical	2	63	junction_1	2304.98888886211	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360560	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.75	chr11	+	1412	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-5046	combination_of_known_splicesites	FALSE	canonical	2	63	junction_1	2304.98888886211	4853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGCTTGTGTTCATGGT	NA	False	NA	NA	False	TATAAA	-24	NA	55360560	55390618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.76	chr11	+	3117	11	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	50	4327	17	-4327	intron_retention	FALSE	canonical	3	6361	junction_7	551.255294759152	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360560	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383
ES.4919.77	chr11	+	1955	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4690	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2085.25600227917	4877	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTGTTCTTTTGACAT	NA	False	NA	25	True	AATAAA	-12	NA	55360560	55390974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380011_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.79	chr11	+	2461	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3951	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	2305.9277129355	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCAATGTAGACTGCT	NA	False	NA	21	True	ATTAAA	-22	NA	55360560	55391713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55389383_55389494_55390284
ES.4919.8	chr11	+	6799	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	-90	-6	-90	6	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	4959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTTTTTCAATGTG	NA	False	NA	NA	False	AATAAA	-21	NA	55360420	55395670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.80	chr11	+	6717	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_3	2085.9475203972	4959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAATGAATTCTCTTT	NA	False	NA	NA	False	AATAAA	-11	NA	55360560	55395660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378455_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.82	chr11	+	3962	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4327	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	2135.29430878368	4892	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360560	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.83	chr11	+	4046	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4513	intron_retention	FALSE	canonical	1	1	junction_2	2830.15365351059	4884	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55360560	55391151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55378387_55379026_55379193_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.84	chr11	+	2343	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3959	combination_of_known_splicesites	FALSE	canonical	2	481	junction_8	2211.58833971763	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360560	55391705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55390284
ES.4919.86	chr11	+	4134	11	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4327	intron_retention	FALSE	canonical	3	186	junction_2	2187.3747644151	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGTGGGGGAACTGT	NA	False	NA	38	True	AATAAA	-25	NA	55360560	55391337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55378455_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.88	chr11	+	1769	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4689	combination_of_known_splicesites	FALSE	canonical	2	63	junction_1	2304.98888886211	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGTTCTTTTGACATG	NA	False	NA	26	True	AATAAA	-13	NA	55360560	55390975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.89	chr11	+	2863	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2723.97853816598	4902	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACTTCATCTGGCAA	NA	False	NA	10	True	ATTAAA	-11	NA	55360560	55391702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55384615_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.92	chr11	+	5527	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4324	intron_retention	FALSE	canonical	3	6361	junction_5	587.135502899827	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGGGGAACTGTAGA	NA	False	NA	41	True	AATAAA	-28	NA	55360560	55391340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.93	chr11	+	3553	8	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4475	intron_retention	FALSE	canonical	3	262	junction_2	2498.54991414408	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360560	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476
ES.4919.94	chr11	+	4299	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3955	intron_retention	FALSE	canonical	3	13	junction_9	2298.32817392594	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360560	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ES.4919.95	chr11	+	3814	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4475	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	2135.29430878368	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360560	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55384442_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.97	chr11	+	2139	13	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-4475	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2046.53471344449	4890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360560	55391189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_55360628_55376451_55376500_55376538_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.98	chr11	+	4412	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3952	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGCAATGTAGACTGC	NA	False	NA	20	True	ATTAAA	-21	NA	55360560	55391712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.4919.99	chr11	+	5469	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	17	-3955	intron_retention	FALSE	canonical	3	6361	junction_6	538.213387050155	4902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCTGGCAATGTAGAC	NA	False	NA	17	True	ATTAAA	-18	NA	55360560	55391709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ES.492.1	chr1	+	176	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGATAAAAACAGG	8752	False	NA	NA	False	NA	NA	NA	55245975	55246151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_55246000_55246200
ES.4920.1	chr11	-	535	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	13	-7	13	7	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTATGTTCTCGGTA	NA	False	NA	0	True	AATAAA	-27	NA	55352052	55337459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
ES.4920.3	chr11	-	6604	3	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	69	-1	27	1	intron_retention	FALSE	canonical	3	2761	junction_1	131.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTCTGGTGTATGTTC	NA	False	NA	-6	True	AATAAA	-21	NA	55351996	55337465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_55337611_55341282_55341452_55345706
ES.4920.6	chr11	-	3749	4	NNC	ENSMUSG00000018585.10	novel	541	4	NA	NA	26	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1358.56468377475	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGTCTGGTGTATG	NA	False	NA	-9	True	AATAAA	-18	NA	55351997	55337468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55339090_55339483_55341452_55345706_55345783_55351913
ES.4920.7	chr11	-	561	6	NNC	ENSMUSG00000018585.10	novel	541	4	NA	NA	-8163	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1209.40008268563	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTGTCTGGTGTATG	NA	False	NA	-9	True	AATAAA	-18	NA	55360228	55337468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55337611_55341286_55341452_55345706_55345783_55352508_55352593_55354155_55354223_55360201
ES.4920.8	chr11	-	3369	2	NNC	ENSMUSG00000018585.10	novel	327	3	NA	NA	-9155	-13498	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	55361220	55350967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_55354223_55361106
ES.4920.9	chr11	-	421	1	Intergenic	novelGene_3798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55357320	55356899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_55356900_55357300
ES.4921.1	chr11	-	174	1	Intergenic	novelGene_3799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	55366437	55366263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_55366300_55366400
ES.4922.1	chr11	-	168	2	Antisense	novelGene_ENSMUSG00000018583.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAACTATCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	55369456	55369044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_55369053_55369296
ES.4922.2	chr11	-	168	1	Intergenic	novelGene_3800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	55369456	55369288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_55369300_55369500
ES.4923.1	chr11	-	3147	1	Antisense	novelGene_ENSMUSG00000018583.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACCAAAGTACACAGCT	8796	False	NA	NA	False	NA	NA	NA	55390527	55387380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_55387400_55390500
ES.4924.1	chr11	-	182	1	Intergenic	novelGene_3802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	17	False	NA	NA	False	NA	NA	NA	55419892	55419710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_55419700_55419900
ES.4925.1	chr11	-	178	1	Intergenic	novelGene_3803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	55437546	55437368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_55437400_55437500
ES.4926.1	chr11	+	3504	1	Intergenic	novelGene_3804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATGGAATCAAATTAAAG	NA	False	NA	NA	False	AAAACA	-14	NA	57239347	57242851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57239300_57242900
ES.4927.1	chr11	+	4847	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	-19	-1	-19	1	multi-exon	FALSE	canonical	3	17	junction_1	35	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAATGATGTATATTAA	NA	False	NA	20	True	AATAAA	-21	NA	57409470	57424642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409539_57418684_57419116_57420294
ES.4927.10	chr11	+	4822	3	NNC	ENSMUSG00000020522.14	novel	4827	3	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTGAATGATGTAT	NA	False	NA	15	True	AATAAA	-16	NA	57409516	57424637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57409539_57418684_57419142_57420294
ES.4927.11	chr11	+	3840	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	10	989	10	-989	multi-exon	FALSE	canonical	3	62	junction_1	12.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTAAAATAGGTCTGT	NA	False	NA	NA	False	TTTAAA	-19	NA	57409522	57423651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409575_57418684_57419116_57420294
ES.4927.12	chr11	+	4931	4	NNC	ENSMUSG00000020522.14	novel	4839	3	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0121933088198	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAATGATGTATATTA	NA	False	NA	19	True	AATAAA	-20	NA	57409532	57424641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57409575_57413927_57414039_57418684_57419116_57420294
ES.4927.13	chr11	+	3932	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	28	879	28	-879	multi-exon	FALSE	canonical	3	62	junction_1	12.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCATTTCAGCATCTTC	NA	False	NA	NA	False	ATTAAA	-31	NA	57409540	57423761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409575_57418684_57419116_57420294
ES.4927.14	chr11	+	1903	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	29	2907	29	1381	multi-exon	FALSE	canonical	3	62	junction_1	12.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACGAGGAGAAGAAAAC	NA	False	NA	NA	False	AAAACA	-7	NA	57409541	57421733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409575_57418684_57419116_57420294
ES.4927.15	chr11	+	7416	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	6535	-2	2258	1	3prime_fragment	FALSE	canonical	3	87	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAATGATGTATATTAA	NA	False	NA	20	True	AATAAA	-21	NA	57416047	57424642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57419116_57420294
ES.4927.2	chr11	+	4833	3	NNC	ENSMUSG00000020522.14	novel	4827	3	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTCAGAGTTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	57409485	57424630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57409539_57418684_57419129_57420294
ES.4927.3	chr11	+	4865	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	-23	-3	0	2	multi-exon	FALSE	canonical	3	62	junction_1	12.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAATGATGTATATTAAA	NA	False	NA	21	True	AATAAA	-22	NA	57409489	57424643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409575_57418684_57419116_57420294
ES.4927.4	chr11	+	5181	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	-16	-326	7	325	multi-exon	FALSE	canonical	3	62	junction_1	12.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATTGTTTCAATACA	NA	False	NA	NA	False	NA	NA	NA	57409496	57424966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409575_57418684_57419116_57420294
ES.4927.5	chr11	+	6035	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	-16	-1	7	0	intron_retention	FALSE	canonical	3	62	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAATGATGTATATTA	NA	False	NA	19	True	AATAAA	-20	NA	57409496	57424641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57409575_57418684
ES.4927.6	chr11	+	2077	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	15	2735	-7	1554	multi-exon	FALSE	canonical	3	17	junction_1	35	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTCATCAGTTTAGATA	NA	False	NA	NA	False	NA	NA	NA	57409504	57421906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409539_57418684_57419116_57420294
ES.4927.7	chr11	+	1897	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	22	2908	0	1381	multi-exon	FALSE	canonical	3	17	junction_1	35	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACGAGGAGAAGAAAAC	NA	False	NA	NA	False	AAAACA	-7	NA	57409511	57421733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409539_57418684_57419116_57420294
ES.4927.8	chr11	+	3909	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	24	894	1	-893	multi-exon	FALSE	canonical	3	17	junction_1	35	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATCTACCAAAAGCTGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	57409513	57423747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57409539_57418684_57419116_57420294
ES.4927.9	chr11	+	792	1	NIC	ENSMUSG00000020522.14	novel	4827	3	NA	NA	4	-9607	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAACAGATTCCCCTCC	NA	False	NA	NA	False	NA	NA	NA	57409516	57410308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57409500_57410300
ES.4928.1	chr11	-	3017	12	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-20	64	intron_retention	TRUE	canonical	0	0	junction_6	155.258994495974	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTCCATTTTCATAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	57409463	57373754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57397662_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.10	chr11	-	3822	13	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	210.738318511107	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	AATAAA	-20	NA	57409451	57373819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57396059_57397227_57397367_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ES.4928.11	chr11	-	3225	5	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	23803	1	12614	-1	3prime_fragment	FALSE	canonical	3	463	junction_1	25.282157740193	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	AATAAA	-20	NA	57385640	57373819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829
ES.4928.12	chr11	-	2610	15	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	175.585623627021	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	AATAAA	-20	NA	57409430	57373819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57407859_57407927_57409398
ES.4928.13	chr11	-	2623	15	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	170.118641073859	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	AATAAA	-20	NA	57409432	57373819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57408930_57409006_57409398
ES.4928.16	chr11	-	2469	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_12	132.513346430646	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGCGTGGTATTTAATA	NA	False	NA	NA	False	AATAAA	-19	NA	57409464	57373820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57409398
ES.4928.17	chr11	-	2325	13	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_3	178.246298855139	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGCGTGGTATTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	57409461	57373821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57409398
ES.4928.2	chr11	-	2582	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTGGTATTTAATAGCG	NA	False	NA	NA	False	AATAAA	-22	NA	57409464	57373817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.22	chr11	-	2870	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	134.586282568549	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	57409440	57373822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409081
ES.4928.24	chr11	-	2660	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.672807150383	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	57409451	57373822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381108_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ES.4928.25	chr11	-	5878	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	143.668668785273	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAGCGTGGTATTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	57409449	57373822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57387235_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.27	chr11	-	2377	13	NIC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-20	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	140.069030600391	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	57409463	57373824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57409398
ES.4928.29	chr11	-	2607	14	NNC	ENSMUSG00000020523.15	novel	1765	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_13	176.180783966508	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	57409441	57373824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405118_57409364
ES.4928.31	chr11	-	2585	15	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	169.409734558748	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	57409426	57373824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57408930_57408979_57409398
ES.4928.33	chr11	-	2659	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.384615384615	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	57409440	57373824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397554_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.35	chr11	-	2503	15	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	194.797919885806	386	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	57409427	57373824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57405030_57405118_57408930_57409006_57409398
ES.4928.36	chr11	-	2167	11	NIC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-4	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	148.265167858132	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATAAGCGTGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	57409447	57373825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57409398
ES.4928.37	chr11	-	2582	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_13	133.80516613796	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATAAGCGTGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	57409438	57373825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409364
ES.4928.39	chr11	-	4645	7	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	4422	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	183.733200290228	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATAAGCGTGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	57393832	57373825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57391573_57391739
ES.4928.40	chr11	-	4284	13	NIC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	3	-7	intron_retention	FALSE	canonical	3	63	junction_12	123.443953769402	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATAAGCGTGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	57409440	57373825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_57374967_57378392_57378447_57380935_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ES.4928.41	chr11	-	3047	13	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	3	-7	intron_retention	FALSE	canonical	3	272	junction_12	68.4301651320527	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTATAAGCGTGGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	57409440	57373825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.43	chr11	-	1802	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-21	20	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATGTATTTCAGGAAA	NA	False	NA	NA	False	NA	NA	NA	57409464	57374597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.46	chr11	-	2213	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	10	12	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	134.32588651106	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAACCAAATGTATT	NA	False	NA	NA	False	NA	NA	NA	57409418	57374605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57408930
ES.4928.47	chr11	-	2078	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	1	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	180.120538207123	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAACCAAATGTATT	NA	False	NA	NA	False	NA	NA	NA	57409427	57374605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404063_57404161_57404461_57404562_57404920_57405118_57409081
ES.4928.49	chr11	-	1791	14	NNC	ENSMUSG00000020523.15	novel	1765	14	NA	NA	3	12	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	137.86692837961	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAACCAAATGTATT	NA	False	NA	NA	False	NA	NA	NA	57409440	57374605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405118_57409398
ES.4928.51	chr11	-	5483	2	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	20751	7634	9576	-7634	internal_fragment	FALSE	canonical	3	520	junction_1	0	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAACGAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	57388678	57382251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_57382886_57383829
ES.4928.52	chr11	-	1412	8	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	-18	508	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_7	85.8118492364997	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACCGTCTGCTGT	NA	False	NA	NA	False	AATATA	-37	NA	57409461	57395607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.53	chr11	-	891	5	NNC	ENSMUSG00000020523.15	novel	759	6	NA	NA	-38	-1674	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_4	108.942645460811	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTAATTTCTCTTGTA	NA	False	NA	NA	False	NA	NA	NA	57409481	57399874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.55	chr11	-	3872	4	NNC	ENSMUSG00000020523.15	novel	759	6	NA	NA	-20	-2450	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_3	120.534918868628	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTACCTTATCTTTCTT	NA	False	NA	NA	False	AATGAA	-18	NA	57409463	57400650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57404161_57404461_57404562_57404920_57405118_57409398
ES.4928.9	chr11	-	2577	14	NNC	ENSMUSG00000020523.15	novel	1765	14	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	137.86692837961	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCGTGGTATTTAATAG	NA	False	NA	NA	False	AATAAA	-20	NA	57409440	57373819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405118_57409398
ES.4929.1	chr11	+	173	1	Intergenic	novelGene_3899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAAAAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	57470434	57470607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57470400_57470600
ES.493.1	chr1	-	1288	7	NNC	ENSMUSG00000025978.15	novel	1870	8	NA	NA	-3912	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.93347457373532	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTTTGCTACTACTA	NA	False	NA	NA	False	ATTAAA	-14	NA	55249560	55210911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55243341_55243552_55245494_55245775_55249397
ES.493.2	chr1	-	219	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAACAAGAGTGACA	346	False	NA	NA	False	NA	NA	NA	55215206	55214987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55215000_55215200
ES.4930.100	chr11	-	1575	3	Intergenic	novelGene_3876	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450918	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57445930_57449541_57450383_57450476
ES.4930.101	chr11	-	5235	2	Intergenic	novelGene_3877	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450444_57450490
ES.4930.102	chr11	-	5135	3	Intergenic	novelGene_3879	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448250_57448303_57450401_57450494
ES.4930.104	chr11	-	5023	2	Intergenic	novelGene_3880	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447229_57447488
ES.4930.105	chr11	-	3056	2	Intergenic	novelGene_3878	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448652_57450877
ES.4930.107	chr11	-	5047	3	Intergenic	novelGene_3881	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446902_57447043_57450383_57450476
ES.4930.109	chr11	-	4881	2	Intergenic	novelGene_3875	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450917	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450098_57450496
ES.4930.110	chr11	-	2824	2	Intergenic	novelGene_3884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	57449479	57445638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447525_57448541
ES.4930.111	chr11	-	1057	2	Intergenic	novelGene_3885	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	83	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446472_57450695
ES.4930.112	chr11	-	5180	2	Intergenic	novelGene_3886	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAAGACCGTTTTCTCGT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447196_57447296
ES.4930.113	chr11	-	2401	2	Intergenic	novelGene_3887	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAAGACCGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	57448177	57445640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447909_57448044
ES.4930.115	chr11	-	5156	1	Intergenic	novelGene_3888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGGTTTCTTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57445800_57450900
ES.4930.116	chr11	-	4778	1	Intergenic	novelGene_3889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTAGTTCTAAGATTA	NA	False	NA	NA	False	NA	NA	NA	57450920	57446142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446100_57450900
ES.4930.117	chr11	-	4681	2	Intergenic	novelGene_3890	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAGTTCTAAGATT	NA	False	NA	NA	False	NA	NA	NA	57450919	57446143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450382_57450476
ES.4930.118	chr11	-	617	3	Intergenic	novelGene_3891	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	42	4370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTGTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	57450920	57446153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446486_57448917_57448978_57450695
ES.4930.119	chr11	-	2970	2	Intergenic	novelGene_3892	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	0	4364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGAAATTAGTGCAGT	NA	False	NA	NA	False	NA	NA	NA	57450919	57446231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448978_57450695
ES.4930.12	chr11	-	5195	3	Intergenic	novelGene_3811	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450921	57433741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654_57450409_57450502
ES.4930.120	chr11	-	4837	1	Intergenic	novelGene_3893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAAGTCACCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	57451087	57446250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446200_57451100
ES.4930.121	chr11	-	4256	1	Intergenic	novelGene_3894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGACAGCGGAGACTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57446663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446700_57450900
ES.4930.122	chr11	-	3824	1	Intergenic	novelGene_3895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTGGCAGATCTAACC	NA	False	NA	NA	False	NA	NA	NA	57450920	57447096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447100_57450900
ES.4930.123	chr11	-	2753	2	Intergenic	novelGene_3897	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGATCTAGACAGAAAA	NA	False	NA	25	True	NA	NA	NA	57450920	57448120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450450_57450496
ES.4930.124	chr11	-	2799	1	Intergenic	novelGene_3896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3920	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGGATCTAGACAGAAAA	NA	False	NA	25	True	NA	NA	NA	57450919	57448120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448100_57450900
ES.4930.125	chr11	-	127	1	Intergenic	novelGene_3898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2752	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450966	57450839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450800_57451000
ES.4930.126	chr11	-	177	1	Intergenic	novelGene_3900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACACAAAAAACACAA	7024	False	NA	NA	False	NA	NA	NA	57500107	57499930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57499900_57500100
ES.4930.14	chr11	-	5242	3	Intergenic	novelGene_3814	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	57450923	57433743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433754_57445644_57450450_57450496
ES.4930.15	chr11	-	1943	2	Intergenic	novelGene_3813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCCGTTTCTTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	57447564	57433743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433951_57445828
ES.4930.17	chr11	-	2463	2	Intergenic	novelGene_3815	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57448103	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433788_57445682
ES.4930.2	chr11	-	5216	3	Intergenic	novelGene_3805	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTCAGCTTTGCTCTCT	NA	False	NA	NA	False	AATATA	-38	NA	57450920	57426121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57426144_57445632_57450383_57450476
ES.4930.20	chr11	-	5298	2	Intergenic	novelGene_3816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433954_57445829
ES.4930.21	chr11	-	5194	3	Intergenic	novelGene_3820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57450923	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434201_57446090_57450383_57450476
ES.4930.22	chr11	-	5188	3	Intergenic	novelGene_3817	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434192_57446082_57450382_57450476
ES.4930.23	chr11	-	3363	3	Intergenic	novelGene_3818	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	64	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433754_57445644_57448776_57450695
ES.4930.24	chr11	-	5191	3	Intergenic	novelGene_3819	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433807_57445695_57450401_57450494
ES.4930.25	chr11	-	5284	2	Intergenic	novelGene_3838	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450921	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433770_57445660
ES.4930.26	chr11	-	5234	3	Intergenic	novelGene_3830	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450918	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654_57450438_57450484
ES.4930.27	chr11	-	650	2	Intergenic	novelGene_3821	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57446299	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434036_57445938
ES.4930.29	chr11	-	1233	2	Intergenic	novelGene_3822	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57446868	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433942_57445830
ES.4930.30	chr11	-	5236	3	Intergenic	novelGene_3836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450920	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654_57450450_57450496
ES.4930.31	chr11	-	5186	3	Intergenic	novelGene_3827	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450917	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433756_57445646_57450417_57450510
ES.4930.35	chr11	-	5282	2	Intergenic	novelGene_3828	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450917	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433781_57445669
ES.4930.36	chr11	-	4838	3	Intergenic	novelGene_3824	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	5	4378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450508	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433948_57445824_57450430_57450476
ES.4930.37	chr11	-	5188	3	Intergenic	novelGene_3831	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434174_57446064_57450430_57450523
ES.4930.39	chr11	-	5235	3	Intergenic	novelGene_3832	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433758_57445648_57450438_57450484
ES.4930.4	chr11	-	5307	2	Intergenic	novelGene_3806	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	10	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTCTTGTGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450923	57433739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433948_57445824
ES.4930.40	chr11	-	5188	3	Intergenic	novelGene_3833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433758_57445648_57450401_57450494
ES.4930.42	chr11	-	3934	3	Intergenic	novelGene_3829	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450917	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433792_57445682_57446783_57448128
ES.4930.43	chr11	-	5190	3	Intergenic	novelGene_3834	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433770_57445660_57450432_57450523
ES.4930.44	chr11	-	4830	3	Intergenic	novelGene_3825	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450562	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433792_57445682_57450382_57450476
ES.4930.45	chr11	-	5188	3	Intergenic	novelGene_3837	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450920	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654_57450415_57450509
ES.4930.47	chr11	-	4458	2	Intergenic	novelGene_3823	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450095	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434182_57446072
ES.4930.48	chr11	-	5114	3	Antisense	novelGene_ENSMUSG00000086028.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	7026	False	NA	NA	False	NA	NA	NA	57500105	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_57433754_57445644_57450632_57499985
ES.4930.49	chr11	-	3886	3	Intergenic	novelGene_3835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	1	junction_2	4.5	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450919	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433948_57445824_57449205_57450614
ES.4930.5	chr11	-	5328	2	Intergenic	novelGene_3807	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGTTTCTTGTGGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57450959	57433740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654
ES.4930.51	chr11	-	3850	3	Intergenic	novelGene_3826	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	57450916	57433746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433775_57445665_57449201_57450629
ES.4930.52	chr11	-	5281	2	Intergenic	novelGene_3839	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAAGACCCGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	57450920	57433748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434188_57446078
ES.4930.54	chr11	-	2945	2	Intergenic	novelGene_3840	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAAGACCCGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	57448585	57433749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57434023_57445913
ES.4930.56	chr11	-	5189	2	Intergenic	novelGene_3841	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTCGTTGGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	57450917	57445628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450377_57450476
ES.4930.57	chr11	-	5492	1	Intergenic	novelGene_3842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTCGTTGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	57451121	57445629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57445600_57451100
ES.4930.59	chr11	-	5196	2	Intergenic	novelGene_3845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450401_57450494
ES.4930.6	chr11	-	5195	3	Intergenic	novelGene_3812	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450921	57433741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433753_57445643_57450383_57450476
ES.4930.60	chr11	-	4905	4	Intergenic	novelGene_3844	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446160_57446254_57447150_57447233_57450341_57450545
ES.4930.61	chr11	-	5199	2	Intergenic	novelGene_3847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450923	57445630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450383_57450476
ES.4930.62	chr11	-	3228	3	Intergenic	novelGene_3843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450366	57445630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448776_57448917_57448978_57450343
ES.4930.63	chr11	-	3371	2	Intergenic	novelGene_3846	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	128	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTCTCGTTGGTGATT	NA	False	NA	NA	False	NA	NA	NA	57450921	57445630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448776_57450695
ES.4930.64	chr11	-	3232	2	Intergenic	novelGene_3848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446486_57448541
ES.4930.65	chr11	-	5196	2	Intergenic	novelGene_3850	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450415_57450507
ES.4930.66	chr11	-	5411	2	Intergenic	novelGene_3851	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57451089	57445631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450450_57450496
ES.4930.67	chr11	-	1312	3	Intergenic	novelGene_3849	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	23.5	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTTTCTCGTTGGTGAT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446486_57448541_57448776_57450695
ES.4930.68	chr11	-	5242	2	Intergenic	novelGene_3860	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450921	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450438_57450484
ES.4930.69	chr11	-	4824	2	Intergenic	novelGene_3853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450503	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450430_57450476
ES.4930.7	chr11	-	3962	3	Intergenic	novelGene_3810	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450919	57433741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433754_57445644_57446780_57448104
ES.4930.70	chr11	-	3316	2	Intergenic	novelGene_3854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	100	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450919	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448725_57450695
ES.4930.71	chr11	-	5153	2	Intergenic	novelGene_3855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450919	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57447712_57447845
ES.4930.72	chr11	-	4727	2	Intergenic	novelGene_3857	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450031_57450591
ES.4930.74	chr11	-	3963	2	Intergenic	novelGene_3858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446780_57448104
ES.4930.75	chr11	-	4437	2	Intergenic	novelGene_3859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450920	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446486_57447336
ES.4930.77	chr11	-	4758	2	Intergenic	novelGene_3852	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450440	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450365_57450414
ES.4930.78	chr11	-	3573	2	Intergenic	novelGene_3861	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450923	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448978_57450695
ES.4930.79	chr11	-	3292	2	Intergenic	novelGene_3856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	15	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450919	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448701_57450695
ES.4930.8	chr11	-	5191	3	Intergenic	novelGene_3809	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450917	57433741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433764_57445654_57450383_57450476
ES.4930.80	chr11	-	5233	2	Intergenic	novelGene_3862	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450960	57445632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450423_57450517
ES.4930.82	chr11	-	4620	3	Intergenic	novelGene_3866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446702_57447273_57450383_57450476
ES.4930.83	chr11	-	3864	3	Intergenic	novelGene_3863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	57450917	57445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446780_57448104_57450383_57450476
ES.4930.85	chr11	-	3856	2	Intergenic	novelGene_3864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57449201_57450629
ES.4930.86	chr11	-	5191	2	Intergenic	novelGene_3865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTTCTCGTTGGT	NA	False	NA	NA	False	NA	NA	NA	57450919	57445634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450409_57450502
ES.4930.88	chr11	-	4420	2	Intergenic	novelGene_3870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57450920	57445635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446472_57447336
ES.4930.89	chr11	-	4647	2	Intergenic	novelGene_3871	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57450920	57445635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450003_57450640
ES.4930.9	chr11	-	3882	3	Intergenic	novelGene_3808	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	1	10	junction_1	8	4378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCGTTTCTTGTGGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450351	57433741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57433948_57445824_57446486_57447336
ES.4930.90	chr11	-	4255	2	Intergenic	novelGene_3868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57450001	57445635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448109_57448219
ES.4930.91	chr11	-	3212	2	Intergenic	novelGene_3867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57449690	57445635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448776_57449618
ES.4930.92	chr11	-	3424	3	Intergenic	novelGene_3869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	44	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	57450919	57445635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448776_57448917_57448978_57450695
ES.4930.95	chr11	-	5191	2	Intergenic	novelGene_3872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	57450922	57445636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450429_57450523
ES.4930.96	chr11	-	3228	2	Intergenic	novelGene_3873	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	150	junction_1	0	4371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57449763	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57448776_57449673
ES.4930.97	chr11	-	3340	2	Intergenic	novelGene_3874	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450321	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446783_57448126
ES.4930.98	chr11	-	5109	2	Intergenic	novelGene_3882	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450920	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57450634_57450807
ES.4930.99	chr11	-	1074	2	Intergenic	novelGene_3883	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	0	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57450921	57445637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57446486_57450695
ES.4931.1	chr11	-	157	1	Intergenic	novelGene_3901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	57534186	57534029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57534000_57534200
ES.4932.1	chr11	+	3288	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	-23	1450	-23	-1450	multi-exon	TRUE	canonical	3	24	junction_9	7.98034776267445	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCGAGCAGCTGATTC	NA	False	NA	35	True	AATAAA	-26	NA	57536244	57676890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.10	chr11	+	200	1	Intergenic	novelGene_3904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTTGAAGCAAATTCC	3217	False	NA	NA	False	NA	NA	NA	57652786	57652986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57652800_57653000
ES.4932.2	chr11	+	4596	11	NIC	ENSMUSG00000020520.15	novel	4715	12	NA	NA	0	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.9676520619579	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTCTGGCATGTC	NA	False	NA	NA	False	AATAAA	-17	NA	57536267	57678324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57536544_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.3	chr11	+	3097	11	NIC	ENSMUSG00000020520.15	novel	4715	12	NA	NA	1	-1450	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.4981480211176	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCGAGCAGCTGATTC	NA	False	NA	35	True	AATAAA	-26	NA	57536268	57676890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57536544_57612120_57612224_57616348_57616488_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.4	chr11	+	4700	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	2	13	2	-13	multi-exon	FALSE	canonical	3	24	junction_9	7.98034776267445	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGGCATGTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	57536269	57678327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.5	chr11	+	2002	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	7	2706	7	-2706	multi-exon	FALSE	canonical	3	24	junction_9	7.98034776267445	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAAGGTGCTGGGTTCTT	NA	False	NA	NA	False	CATAAA	-34	NA	57536274	57675634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.6	chr11	+	3155	11	NIC	ENSMUSG00000020520.15	novel	4715	12	NA	NA	7	-1450	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.9676520619579	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCCGAGCAGCTGATTC	NA	False	NA	35	True	AATAAA	-26	NA	57536274	57676890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57536544_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ES.4932.7	chr11	+	1757	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	-11	-1	-11	1	multi-exon	FALSE	canonical	3	46	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACGGTGTCTGCCTGGT	NA	False	NA	NA	False	AGTAAA	-25	NA	57536279	57617738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57536544_57612120_57612224_57616348
ES.4932.8	chr11	+	1150	4	NNC	ENSMUSG00000020520.15	novel	1745	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	20.7417989148054	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACGGTGTCTGCCTGG	NA	False	NA	NA	False	AGTAAA	-24	NA	57536279	57617737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57536544_57612120_57612224_57616348_57616488_57617093
ES.4933.1	chr11	-	1049	1	Intergenic	novelGene_3902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACACCCA	NA	False	NA	NA	False	AAAACA	-25	NA	57566093	57565044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57565000_57566100
ES.4934.1	chr11	-	178	1	Intergenic	novelGene_3903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	57608950	57608772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57608800_57609000
ES.4935.1	chr11	-	633	3	FSM	ENSMUSG00000087165.8	ENSMUST00000140069.2	502	3	-23	-108	-4	1	multi-exon	FALSE	canonical	3	13	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTGTCTCAGTGATTA	NA	False	NA	-2	True	NA	NA	NA	57692247	57686323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_57686621_57686851_57687000_57692059
ES.4936.1	chr11	+	1217	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-62	-4	-62	4	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTCAGGAGGATTATATT	NA	False	NA	28	True	AATAAA	-28	NA	57692400	57701047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
ES.4936.2	chr11	+	5871	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-56	-4664	-56	4664	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGGCTCCCTTTGAAT	NA	False	NA	NA	False	AATAAA	-24	NA	57692406	57705707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
ES.4936.3	chr11	+	1325	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	-55	-119	-55	119	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAGTGCTCAGCAAGGC	NA	False	NA	NA	False	TATAAA	-19	NA	57692407	57701162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
ES.4936.4	chr11	+	1194	4	NNC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-55	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	260.81453606389	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGTCTCGGTCAGGA	NA	False	NA	18	True	AATAAA	-18	NA	57692407	57701037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57693116_57696869_57696993_57698849_57698943_57700767
ES.4936.5	chr11	+	2418	1	Genic_Genomic	ENSMUSG00000020519.6	novel	NA	NA	NA	NA	-45	-6208	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAGACAACCACAGTGAG	NA	False	NA	NA	False	NA	NA	NA	57692417	57694835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_57692400_57694800
ES.4936.6	chr11	+	3051	3	NIC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-43	0	intron_retention	FALSE	canonical	3	563	junction_1	4.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	24	True	AATAAA	-24	NA	57692419	57701043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57693116_57696869_57698949_57700767
ES.4936.7	chr11	+	1126	4	NNC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-37	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	267.547295922713	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTAAATGTCTCGGT	NA	False	NA	13	True	AATAAA	-13	NA	57692425	57701032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57693116_57696869_57696942_57698849_57698949_57700767
ES.4936.8	chr11	+	1394	4	NNC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	-25	-4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	255.160515928482	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCTCGGTCAGGAGG	NA	False	NA	20	True	AATAAA	-20	NA	57692437	57701039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57693116_57696869_57696993_57698849_57699171_57700767
ES.4936.9	chr11	+	4814	2	ISM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	0	13	0	-13	intron_retention	FALSE	canonical	3	563	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACTGTAAATGTCTCG	NA	False	NA	11	True	AATAAA	-11	NA	57692462	57701030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57693116_57696869
ES.4937.1	chr11	-	301	1	Intergenic	novelGene_3905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAATAATCCAAT	NA	False	NA	NA	False	NA	NA	NA	57737406	57737105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57737100_57737400
ES.4938.1	chr11	+	250	1	Intergenic	novelGene_3906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCTCTCTAGCCACA	NA	False	NA	NA	False	AAGAAA	-19	NA	57767658	57767908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57767700_57767900
ES.4939.1	chr11	-	176	1	Intergenic	novelGene_3907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAATAACAA	6803	False	NA	NA	False	NA	NA	NA	57794670	57794494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57794500_57794700
ES.494.1	chr1	-	154	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAACCTT	NA	False	NA	NA	False	NA	NA	NA	55252731	55252577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55252600_55252700
ES.4940.1	chr11	-	187	1	Intergenic	novelGene_3908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAATTTTTTTCG	NA	False	NA	NA	False	NA	NA	NA	57811163	57810976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57811000_57811200
ES.4941.1	chr11	+	291	1	Intergenic	novelGene_3909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAATTTTAAAGTAGC	6368	False	NA	NA	False	AATAAA	-5	NA	57813699	57813990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57813700_57814000
ES.4942.1	chr11	+	178	1	Intergenic	novelGene_3910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTCAA	2506	False	NA	NA	False	NA	NA	NA	57834219	57834397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57834200_57834400
ES.4943.1	chr11	-	173	1	Intergenic	novelGene_3911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATGAATTCTATT	NA	False	NA	NA	False	NA	NA	NA	57892702	57892529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57892500_57892700
ES.4944.1	chr11	-	3841	1	Intergenic	novelGene_3912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAGAAGAAGAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-39	NA	57899521	57895680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57895700_57899500
ES.4945.1	chr11	+	3657	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-234	4364	-234	-4361	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGTGGTGAGTCTGAA	NA	False	NA	NA	False	NA	NA	NA	57899655	57948496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.10	chr11	+	6720	17	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-195	-36	intron_retention	FALSE	canonical	0	0	junction_6	179.250076272648	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	-22	True	NA	NA	NA	57899694	57952821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933733_57938529_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.100	chr11	+	6858	15	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-28	-36	intron_retention	FALSE	canonical	3	480	junction_14	77.6070688974731	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	-22	True	NA	NA	NA	57932410	57952821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57932479_57933055_57933185_57933261_57933469_57933569_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.101	chr11	+	6799	12	NIC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	821	-1	intron_retention	FALSE	canonical	3	480	junction_11	86.5052427589992	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGCTGGTCTCCC	NA	False	NA	13	True	AATAAA	-14	NA	57933259	57952856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.102	chr11	+	5703	14	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	33370	0	821	0	3prime_fragment	FALSE	canonical	3	480	junction_13	80.6882377795942	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57933259	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.104	chr11	+	3403	14	NNC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	898	-2142	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	194.855036391417	1237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTGCCACTGTCCTT	NA	False	NA	10	True	NA	NA	NA	57933336	57950715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.105	chr11	+	3550	11	NNC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	5115	-2596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	213.279066014459	1197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57937553	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57938696_57938802_57938973_57940522_57940916_57941612_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.106	chr11	+	4721	10	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	38122	2141	5573	-2141	intron_retention	FALSE	canonical	3	629	junction_5	53.1756929525855	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCACTGTCCTTG	NA	False	NA	11	True	NA	NA	NA	57938011	57950716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.108	chr11	+	5187	11	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	38630	0	6081	0	3prime_fragment	FALSE	canonical	3	480	junction_10	83.5756543498165	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57938519	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.109	chr11	+	2821	10	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	38640	3523	6091	-3523	internal_fragment	FALSE	canonical	3	629	junction_5	53.1756929525855	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTGTGGCTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	57938529	57949334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.11	chr11	+	6680	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-195	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	225.438646494636	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899694	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933370_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.110	chr11	+	5943	9	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	6113	0	intron_retention	FALSE	canonical	3	480	junction_8	69.7485438916111	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57938551	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57938696_57938802_57938973_57940522_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.111	chr11	+	5014	10	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	38910	0	6361	0	3prime_fragment	FALSE	canonical	3	480	junction_9	87.5414540251617	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57938799	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.112	chr11	+	5257	7	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	9209	0	intron_retention	FALSE	canonical	3	480	junction_6	91.1256763425594	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57941647	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57941733_57941827_57942034_57942450_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.113	chr11	+	2735	5	NNC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	9248	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	304.539406317146	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	-22	True	NA	NA	NA	57941686	57952821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57941733_57941827_57942034_57942450_57942558_57943405_57943484_57950523
ES.4945.114	chr11	+	4120	6	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	42559	0	10010	0	3prime_fragment	FALSE	canonical	3	480	junction_5	77.4095601330998	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57942448	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.115	chr11	+	4146	5	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	10081	0	intron_retention	FALSE	canonical	3	480	junction_4	82.9110969653641	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57942519	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57942558_57943405_57943558_57946292_57946438_57947879_57948215_57949384
ES.4945.116	chr11	+	2726	3	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	43469	2596	10920	-2596	intron_retention	FALSE	canonical	3	669	junction_2	8	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57943358	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57943558_57946292_57946438_57947879
ES.4945.117	chr11	+	1876	5	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	43513	2135	10964	-2135	3prime_fragment	FALSE	canonical	3	480	junction_4	85.6358569759187	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTGTCCTTGTTGTGC	NA	False	NA	17	True	NA	NA	NA	57943402	57950722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.118	chr11	+	3821	4	ISM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	46402	36	13853	-36	3prime_fragment	FALSE	canonical	3	480	junction_3	91.2907443282176	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	-22	True	NA	NA	NA	57946291	57952821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.119	chr11	+	239	1	Intergenic	novelGene_3914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCGAGACAGGGT	NA	False	NA	NA	False	NA	NA	NA	57967672	57967911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57967700_57967900
ES.4945.120	chr11	+	187	1	Intergenic	novelGene_3915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAC	860	False	NA	NA	False	NA	NA	NA	57974275	57974462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57974300_57974500
ES.4945.121	chr11	+	245	1	Intergenic	novelGene_3916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAACCTAAGCTTT	4422	False	NA	NA	False	NA	NA	NA	57977837	57978082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_57977800_57978100
ES.4945.13	chr11	+	4309	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-190	-3632	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	169.738859065379	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGTCCGTTTCCTT	NA	False	NA	14	True	AATATA	-20	NA	57899699	57949225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.14	chr11	+	2658	11	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-187	11643	-187	7378	5prime_fragment	FALSE	canonical	3	653	junction_6	41.6984412178681	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTAAGAACCCTTCTTA	NA	False	NA	12	True	AATAAA	-24	NA	57899702	57941217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522
ES.4945.15	chr11	+	7973	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-184	-2	-184	2	intron_retention	FALSE	canonical	3	629	junction_13	50.0992786002251	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGTCTCCCATCTGG	NA	False	NA	19	True	AATAAA	-20	NA	57899705	57952862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.16	chr11	+	5452	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-183	2518	-183	-2515	intron_retention	FALSE	canonical	3	629	junction_13	50.0992786002251	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAATCGACCACTTTAA	NA	False	NA	2	True	NA	NA	NA	57899706	57950342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.18	chr11	+	6821	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-181	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	172.334479543434	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899708	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948063_57948215_57949384
ES.4945.2	chr11	+	6853	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-234	-2	-234	2	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGTCTCCCATCTGG	NA	False	NA	19	True	AATAAA	-20	NA	57899655	57952862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.21	chr11	+	4282	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-176	2511	-176	-2508	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGACCACTTTAAAAAAAAA	NA	False	NA	9	True	NA	NA	NA	57899713	57950349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.22	chr11	+	2528	13	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-176	10974	-176	8047	5prime_fragment	FALSE	canonical	3	653	junction_6	50.9907399000598	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCTCTACCAACCACTGT	NA	False	NA	NA	False	NA	NA	NA	57899713	57941886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827
ES.4945.23	chr11	+	7471	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-176	0	intron_retention	FALSE	canonical	3	480	junction_16	73.4138259713387	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899713	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57933185_57933261_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.24	chr11	+	3839	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-175	-2964	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	171.609555404624	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTTGTCTGGATTACC	NA	False	NA	NA	False	TTTAAA	-6	NA	57899714	57949893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931501_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.25	chr11	+	4681	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-175	-2141	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	170.368817424484	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGCCACTGTCCTTG	NA	False	NA	11	True	NA	NA	NA	57899714	57950716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940489_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.26	chr11	+	6888	18	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-170	0	intron_retention	FALSE	canonical	3	480	junction_17	71.5869544087643	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899719	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.28	chr11	+	6709	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	168.270221025441	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899719	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.29	chr11	+	4176	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-169	-2508	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	171.404618402996	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGACCACTTTAAAAAAAAA	NA	False	NA	9	True	NA	NA	NA	57899720	57950349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933370_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.30	chr11	+	4860	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-169	1926	-169	-1923	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGGTCTGTGTCTAAC	NA	False	NA	NA	False	NA	NA	NA	57899720	57950934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.31	chr11	+	4333	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-169	28103	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	167.584887279386	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTCAACCAACTTGTG	NA	False	NA	NA	False	AAAACA	-5	NA	57899720	57980963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57949218_57980943
ES.4945.32	chr11	+	1311	1	Genic_Genomic	ENSMUSG00000037331.16	novel	NA	NA	NA	NA	-169	-32808	mono-exon	FALSE	NA	NA	NA	NA	NA	844	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATGGAGCTTAGGTG	NA	False	NA	NA	False	NA	NA	NA	57899720	57901031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_57899700_57901000
ES.4945.33	chr11	+	3797	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-167	-2972	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	172.658667410874	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGATAGTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	57899722	57949885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942552_57943411_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.34	chr11	+	3501	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-167	-4417	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	169.738859065379	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTAAATTAATTTTC	NA	False	NA	NA	False	GATAAA	-25	NA	57899722	57948440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.35	chr11	+	6676	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-167	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	224.203562983109	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTGGTCTCCCA	NA	False	NA	14	True	AATAAA	-15	NA	57899722	57952857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938829_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.36	chr11	+	4233	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-167	-2515	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	170.136401342359	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAATCGACCACTTTAA	NA	False	NA	2	True	NA	NA	NA	57899722	57950342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.37	chr11	+	7358	18	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-164	0	intron_retention	FALSE	canonical	3	480	junction_17	71.8012443145737	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899725	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.38	chr11	+	6653	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-164	128	-164	-125	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGGCTGAAGTGATTC	NA	False	NA	NA	False	NA	NA	NA	57899725	57952732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.39	chr11	+	8472	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-163	0	intron_retention	FALSE	canonical	3	480	junction_16	68.4597281253731	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899726	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57934877_57938520_57938696_57938802_57938973_57940522_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.4	chr11	+	4368	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-216	3635	-216	-3632	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGTCCGTTTCCTT	NA	False	NA	14	True	AATATA	-20	NA	57899673	57949225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.40	chr11	+	6773	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-162	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.694568031018	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899727	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932309_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.42	chr11	+	6554	16	NIC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	-161	-2967	intron_retention	FALSE	canonical	3	629	junction_11	50.6878902916882	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATAGTTTGTCTGGATT	NA	False	NA	NA	False	TTTAAA	-3	NA	57899728	57949890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57933185_57933261_57933469_57933569_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.43	chr11	+	4372	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-161	-2596	intron_retention	FALSE	canonical	0	0	junction_17	172.431381467756	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57899728	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948307_57949384
ES.4945.44	chr11	+	2144	9	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-160	1638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	227.690270707819	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAGAGTCCAGA	NA	False	NA	NA	False	NA	NA	NA	57899729	57935477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57935396_57935443
ES.4945.45	chr11	+	4279	18	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-160	-2596	intron_retention	FALSE	canonical	3	480	junction_17	71.5869544087643	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57899729	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.46	chr11	+	4755	18	NIC	ENSMUSG00000037331.16	novel	6614	19	NA	NA	-160	-2596	intron_retention	FALSE	canonical	3	480	junction_17	71.8012443145737	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57899729	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.49	chr11	+	6715	20	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-156	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	168.056760626414	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899733	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384_57952147_57952204
ES.4945.5	chr11	+	3874	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-211	2954	-211	-2951	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCAAAATCACTCTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	57899678	57949906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.51	chr11	+	6802	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-152	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	170.368817424484	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899737	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940489_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.52	chr11	+	2182	8	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-150	17383	-150	1638	5prime_fragment	FALSE	canonical	3	653	junction_6	28.9869780756667	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAGAGTCCAGA	NA	False	NA	NA	False	NA	NA	NA	57899739	57935477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731
ES.4945.53	chr11	+	4324	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-150	-3633	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	172.166994654733	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTGGTCCGTTTCCT	NA	False	NA	13	True	AATATA	-19	NA	57899739	57949224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948063
ES.4945.55	chr11	+	5883	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-150	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	167.584887279386	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899739	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57950268
ES.4945.56	chr11	+	3609	17	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	-4425	intron_retention	FALSE	canonical	1	1	junction_6	177.455881400843	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAGAAATTTGTAAAT	NA	False	NA	NA	False	GATAAA	-17	NA	57899740	57948432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933473_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879
ES.4945.57	chr11	+	6667	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	171.404618402996	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899740	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933370_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.58	chr11	+	7810	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-149	126	-149	-123	intron_retention	FALSE	canonical	3	629	junction_13	50.0992786002251	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCTGAAGTGATTCAT	NA	False	NA	NA	False	NA	NA	NA	57899740	57952734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.59	chr11	+	9036	16	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	0	intron_retention	FALSE	canonical	3	629	junction_11	50.1696676843245	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899740	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.6	chr11	+	4440	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-205	2382	-205	-2379	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTGTGGAGCGGGAA	NA	False	NA	NA	False	TTTAAA	-5	NA	57899684	57950478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.60	chr11	+	4170	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	-2515	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	168.270221025441	1210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAATCGACCACTTTAA	NA	False	NA	2	True	NA	NA	NA	57899740	57950342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.63	chr11	+	7863	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-146	0	intron_retention	FALSE	canonical	3	480	junction_16	73.2084993358012	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899743	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.64	chr11	+	3544	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-146	-4409	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	172.166994654733	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATTTTCAGTCCTCC	NA	False	NA	NA	False	GATAAA	-33	NA	57899743	57948448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948063
ES.4945.65	chr11	+	4331	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-146	-2521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	167.584887279386	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACAAAATCGACCA	NA	False	NA	-4	True	NA	NA	NA	57899743	57950336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948307_57949384
ES.4945.66	chr11	+	3711	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	-2970	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	168.270221025441	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGATAGTTTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	57899744	57949887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.67	chr11	+	2578	11	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	7373	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	211.506524722052	1028	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTCTTAAGAACCCT	NA	False	NA	7	True	AATAAA	-19	NA	57899744	57941212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522
ES.4945.68	chr11	+	3711	9	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	7373	intron_retention	FALSE	canonical	3	661	junction_4	38.6245954671373	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTCTTAAGAACCCT	NA	False	NA	7	True	AATAAA	-19	NA	57899744	57941212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57934877_57938520_57938696_57938802_57938973_57940522
ES.4945.69	chr11	+	4216	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	-3635	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	167.697164854824	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGTTTGGTCCGTTTC	NA	False	NA	11	True	AATATA	-17	NA	57899744	57949222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.7	chr11	+	6690	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-196	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	172.647003027336	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899693	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932389_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.70	chr11	+	4294	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	-3634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	171.658952134023	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGGTCCGTTTCC	NA	False	NA	12	True	AATATA	-18	NA	57899744	57949223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931576_57932298_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.71	chr11	+	3323	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	-4424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	228.28916889918	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAAATTTGTAAATT	NA	False	NA	NA	False	GATAAA	-18	NA	57899744	57948433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938589_57938799_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.72	chr11	+	3378	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-145	-4404	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	172.44342134165	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGTCCTCCGTTGT	NA	False	NA	NA	False	GATAAA	-38	NA	57899744	57948453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932332_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.73	chr11	+	5430	17	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-145	2599	-145	-2596	intron_retention	FALSE	canonical	3	629	junction_13	51.327342554919	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57899744	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879
ES.4945.75	chr11	+	6232	19	NNC	ENSMUSG00000037331.16	novel	747	3	NA	NA	-145	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.576919690544	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGTCTCCCATCTGGG	NA	False	NA	20	True	AATAAA	-21	NA	57899744	57952863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57899834_57931209_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.77	chr11	+	6693	18	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-142	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	172.037092644798	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899747	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.78	chr11	+	3668	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-142	4261	-142	-4258	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCCTTCAAGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	57899747	57948599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.8	chr11	+	6780	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-196	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	170.136401342359	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899693	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933088_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.80	chr11	+	4192	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-141	-2596	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	170.368817424484	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGAAAAACAAAACAA	NA	False	NA	-79	True	NA	NA	NA	57899748	57950261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940489_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.86	chr11	+	4357	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-130	-3634	intron_retention	FALSE	canonical	3	629	junction_12	51.6175463747552	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGGTCCGTTTCC	NA	False	NA	12	True	AATATA	-18	NA	57899759	57949223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.87	chr11	+	6795	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	169.035243603951	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899776	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941543_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.88	chr11	+	3546	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-26	-2990	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	227.006009601204	1191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATCAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	57899863	57949867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933370_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948091_57948215_57949384
ES.4945.89	chr11	+	5275	16	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-24	-3633	intron_retention	FALSE	canonical	3	629	junction_11	50.1696676843245	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTGGTCCGTTTCCT	NA	False	NA	13	True	AATATA	-19	NA	57899865	57949224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.9	chr11	+	4676	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-196	2137	-196	-2134	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTCCTTGTTGTGCT	NA	False	NA	18	True	NA	NA	NA	57899693	57950723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.90	chr11	+	5958	15	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-16	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	195.252479144939	1317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTATAAAAATA	NA	False	NA	-22	True	NA	NA	NA	57899873	57952821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57941945_57948119_57948215_57949384
ES.4945.91	chr11	+	3274	18	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-11	-4422	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	171.077553792906	1123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATTTGTAAATTAA	NA	False	NA	NA	False	GATAAA	-20	NA	57899878	57948435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933370_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.92	chr11	+	6444	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	70	-133	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	170.368817424484	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCTTCCCAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	57899959	57952724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940489_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.93	chr11	+	3892	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	87	2638	87	-2635	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATTTTATTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	57899976	57950222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.96	chr11	+	3909	17	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	171	-3638	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	172.218509004549	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTGTTTGGTCCGT	NA	False	NA	8	True	AATATA	-14	NA	57900060	57949219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57900374_57931216_57931279_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.97	chr11	+	7240	16	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	31624	3	-925	0	intron_retention	FALSE	canonical	3	629	junction_11	52.6037598994174	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTGGTCTCCCA	NA	False	NA	14	True	AATAAA	-15	NA	57931513	57952857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
ES.4945.98	chr11	+	4843	12	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-909	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	197.679471755969	1316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57931529	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934795_57942514_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4945.99	chr11	+	5899	16	NIC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-880	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	187.597441347157	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57931558	57952860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57931582_57932303_57932479_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ES.4946.1	chr11	-	227	1	Intergenic	novelGene_3913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTCTTCCTTGTCTGCG	NA	False	NA	NA	False	AAGAAA	-6	NA	57965659	57965432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57965400_57965700
ES.4947.1	chr11	-	203	1	Intergenic	novelGene_3917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTCTCTTTAAAAACAT	NA	False	NA	NA	False	NA	NA	NA	57979228	57979025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_57979000_57979200
ES.4948.1	chr11	+	2270	8	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-10948	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.229635891629	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57984030	58009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57984231_57993947_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.10	chr11	+	1298	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-200	588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGTCATTCTTCTTC	NA	False	NA	15	True	AGTAAA	-16	NA	57994778	58008672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57994846_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.11	chr11	+	4272	6	ISM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-177	3	-177	-3	intron_retention	FALSE	canonical	3	691	junction_3	54.6091567413378	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATGAAGTGTGGTCT	NA	False	NA	11	True	AATAAA	-16	NA	57994801	58009417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090
ES.4948.12	chr11	+	3525	6	ISM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-176	749	-176	587	intron_retention	FALSE	canonical	3	691	junction_3	54.6091567413378	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTTGTCATTCTTCTT	NA	False	NA	14	True	AGTAAA	-15	NA	57994802	58008671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090
ES.4948.13	chr11	+	1860	1	Genic_Genomic	ENSMUSG00000020515.14	novel	NA	NA	NA	NA	-176	-5533	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTTGTGAGCTGCCATG	NA	False	NA	NA	False	NA	NA	NA	57994802	57996662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_57994800_57996700
ES.4948.14	chr11	+	1461	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-174	748	-174	588	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGTCATTCTTCTTC	NA	False	NA	15	True	AGTAAA	-16	NA	57994804	58008672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.15	chr11	+	3760	6	NIC	ENSMUSG00000020515.14	novel	2035	7	NA	NA	-131	-4	intron_retention	FALSE	canonical	3	699	junction_3	51.7014506566305	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCATGAAGTGTGGTC	NA	False	NA	10	True	AATAAA	-15	NA	57994847	58009416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57995035_58000381_58000593_58002085_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.16	chr11	+	2398	7	NIC	ENSMUSG00000020515.14	novel	2035	7	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	277.391069711257	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994847	58009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008032
ES.4948.17	chr11	+	2190	7	NNC	ENSMUSG00000020515.14	novel	2035	7	NA	NA	-130	3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_6	277.391069711257	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGTGGTCTTTGCTA	NA	False	NA	17	True	AATAAA	-22	NA	57994848	58009423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008242
ES.4948.2	chr11	+	3498	8	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-10908	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	328.229635891629	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGTGGTCTTTGCTA	NA	False	NA	17	True	AATAAA	-22	NA	57984070	58009423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57985498_57993949_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.20	chr11	+	2084	7	FSM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	8	7	8	-7	multi-exon	FALSE	canonical	2	5	junction_1	277.140558000609	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTGGCATGAAGTGTG	NA	False	NA	7	True	AATAAA	-12	NA	57995062	58009413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57995175_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.21	chr11	+	1315	7	NNC	ENSMUSG00000020515.14	novel	2099	7	NA	NA	45	588	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGTCATTCTTCTTC	NA	False	NA	15	True	AGTAAA	-16	NA	57995099	58008672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57995184_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.22	chr11	+	1568	6	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	4988	750	-4810	586	3prime_fragment	FALSE	canonical	3	691	junction_2	54.4227893441709	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGTTGTCATTCTTCT	NA	False	NA	13	True	AGTAAA	-14	NA	58000042	58008670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.23	chr11	+	2203	6	NIC	ENSMUSG00000020515.14	novel	2035	7	NA	NA	-4472	-9	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	300.217920850838	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCATTGGCATGAAGTG	NA	False	NA	5	True	AATAAA	-10	NA	58000380	58009411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008032
ES.4948.24	chr11	+	1982	6	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	5326	-2	-4472	2	3prime_fragment	FALSE	canonical	3	691	junction_2	54.4227893441709	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	58000380	58009422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.3	chr11	+	5038	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-10377	-7	intron_retention	FALSE	canonical	0	0	junction_1	345.442228648052	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTGGCATGAAGTGTG	NA	False	NA	7	True	AATAAA	-12	NA	57984601	58009413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57985494_57993927_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090
ES.4948.4	chr11	+	2159	8	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1316	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.229635891629	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57993662	58009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57993732_57993927_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.5	chr11	+	2341	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1302	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	266.148872291848	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57993676	58009420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.6	chr11	+	4388	6	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1284	2	intron_retention	FALSE	canonical	3	35	junction_1	288.02111033742	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTGTGGTCTTTGCT	NA	False	NA	16	True	AATAAA	-21	NA	57993694	58009422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090
ES.4948.7	chr11	+	1375	8	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1281	588	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	328.229635891629	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTGTCATTCTTCTTC	NA	False	NA	15	True	AGTAAA	-16	NA	57993697	58008672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57993731_57993927_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.8	chr11	+	2262	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-224	-3	-224	3	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGTGGTCTTTGCTA	NA	False	NA	17	True	AATAAA	-22	NA	57994754	58009423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4948.9	chr11	+	2069	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-222	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.973963341066	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAAGTGTGGTCTTTGC	NA	False	NA	15	True	AATAAA	-20	NA	57994756	58009421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_57994846_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ES.4949.1	chr11	-	2090	1	Antisense	novelGene_ENSMUSG00000020515.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCTCTGCATCCTAAAC	424	False	NA	NA	False	NA	NA	NA	58010208	58008118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_58008100_58010200
ES.495.1	chr1	+	2859	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	25	8410	25	-8410	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTGGTTACACTCATT	NA	False	NA	27	True	ATTAAA	-27	NA	55276360	55279219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55276400_55279200
ES.495.2	chr1	+	6840	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	26	4428	26	-4428	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTGAAGATGTTTTAAA	NA	False	NA	20	True	NA	NA	NA	55276361	55283201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55276400_55283200
ES.495.3	chr1	+	6643	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	41	4610	41	-4610	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGACTTCAGTTTGAT	NA	False	NA	NA	False	AATAAA	-25	NA	55276376	55283019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55276400_55283000
ES.495.4	chr1	+	1901	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	43	9350	43	-9350	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATTCAGGTCTCTCTAA	NA	False	NA	NA	False	CATAAA	-19	NA	55276378	55278279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55276400_55278300
ES.495.5	chr1	+	14509	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	47	-3262	47	3262	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAGTATATAGTAATGG	NA	False	NA	NA	False	NA	NA	NA	55276382	55290891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55276400_55290900
ES.495.6	chr1	+	8595	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	1886	813	1886	-813	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACACTGCTGATTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	55278221	55286816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55278200_55286800
ES.495.7	chr1	+	6026	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	5438	-170	5438	170	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTCAATGTTCTGGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	55281773	55287799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55281800_55287800
ES.4950.1	chr11	+	4057	2	Antisense	novelGene_ENSMUSG00000037275.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2255	False	NA	NA	False	NA	NA	NA	58053595	58057995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_58054740_58055082
ES.4951.1	chr11	-	6321	28	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	-3	104	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	58.4254534229881	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTAGCAGGAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	58059368	58010723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030316_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.12	chr11	-	5651	27	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	67	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	58.6424452980309	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATGTGCTCTTTTCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	58059298	58010832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013205_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.13	chr11	-	6119	28	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	58	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	56.0091360370423	470	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATTAAAATGGCAACTG	NA	False	NA	-30	True	AGTAAA	-13	NA	58059307	58010857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058690_58059113
ES.4951.14	chr11	-	5240	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	22	951	22	337	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTCTTCCTTTT	NA	False	NA	52	True	NA	NA	NA	58059343	58011778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.16	chr11	-	5243	28	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	33	333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	58.4254534229881	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAACAATGTGTCTTCC	NA	False	NA	48	True	NA	NA	NA	58059332	58011782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029989_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.17	chr11	-	7997	24	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	26	285	intron_retention	FALSE	canonical	0	0	junction_3	57.0397665812599	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGGGTCATAGAATC	NA	False	NA	0	True	AATAAA	-25	NA	58059339	58011830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58029968_58030320_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.19	chr11	-	5196	28	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	6	285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.1966252506627	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGGGTCATAGAATC	NA	False	NA	0	True	AATAAA	-25	NA	58059359	58011830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019720_58020839_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.22	chr11	-	5273	29	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	-11	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	69.5419782195896	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGGTCATAGAA	NA	False	NA	-2	True	AATAAA	-23	NA	58059376	58011832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58031013_58031068_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.24	chr11	-	5832	27	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	48	283	intron_retention	FALSE	canonical	3	150	junction_9	34.9977387266139	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGGTCATAGAA	NA	False	NA	-2	True	AATAAA	-23	NA	58059317	58011832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.25	chr11	-	5050	27	NIC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	37	282	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	63.123950574205	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTGGGGTCATAGA	NA	False	NA	-3	True	AATAAA	-22	NA	58059328	58011833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.3	chr11	-	5936	3	ISM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	39550	-1289	10484	1	intron_retention	FALSE	canonical	3	91	junction_2	96	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCTTTTCTTTATCAA	NA	False	NA	1	True	ATTAAA	-22	NA	58019815	58010826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58012611_58013107_58013202_58015757
ES.4951.33	chr11	-	4936	28	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	11	31	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_24	60.1580223604549	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATACCTATCACTGTT	NA	False	NA	-3	True	TATAAA	-43	NA	58059354	58012084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054737_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.35	chr11	-	4942	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	-13	-7	-13	7	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTCTGTGGGAGGTAT	NA	False	NA	-27	True	TATAAA	-19	NA	58059378	58012108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.38	chr11	-	4943	29	NNC	ENSMUSG00000037275.15	novel	4922	28	NA	NA	38	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	73.2243198698914	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059327	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58031013_58031068_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.43	chr11	-	3943	24	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	785	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.329512189307	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58058580	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017387_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534
ES.4951.44	chr11	-	4916	28	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	26	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	70.4463722133702	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059339	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016260_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029965_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.46	chr11	-	4747	27	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	69	5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	56.1043116612462	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059296	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.49	chr11	-	8091	26	NIC	ENSMUSG00000037275.15	novel	4922	28	NA	NA	67	5	intron_retention	FALSE	canonical	3	91	junction_2	41.8221759357401	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059298	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58029968_58030320_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.50	chr11	-	4764	28	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	67	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.5025461630544	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059298	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019627_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.52	chr11	-	4799	27	NNC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	54	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	57.4102463897565	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059311	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051633_58055007_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.53	chr11	-	4818	28	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	67	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	63.2307377805633	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGTTCTGTGGGAGGT	NA	False	NA	-29	True	TATAAA	-17	NA	58059298	58012110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030396_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.57	chr11	-	4885	28	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.9354795713464	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059376	58012115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017373_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.58	chr11	-	4600	27	NIC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	57.8902757263138	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059298	58012115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.62	chr11	-	4849	28	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	63.3105222077833	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059301	58012115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039246_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.67	chr11	-	4642	27	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	76.1369930846782	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGTCTCGTTCTGT	NA	False	NA	-36	True	TATAAA	-10	NA	58059325	58012117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056780_58058534_58058696_58059113
ES.4951.69	chr11	-	4735	28	NNC	ENSMUSG00000037275.15	novel	4922	28	NA	NA	63	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	61.6352828603752	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAAATGTCTCGTTCTG	NA	False	NA	-37	True	TATAAA	-9	NA	58059302	58012118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056780_58058534_58058696_58059113
ES.4951.7	chr11	-	6213	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	34.9266525198369	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCTTTTCTTTATCA	NA	False	NA	0	True	ATTAAA	-21	NA	58059365	58010827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.73	chr11	-	6382	25	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	-12	-1522	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	58.2279852295173	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCATTGGTGTCTTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	58059377	58013637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.74	chr11	-	2397	4	ISM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	38481	2191	9415	-2191	internal_fragment	FALSE	canonical	3	243	junction_3	21.1817531537563	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATTGAAATCCCACTA	NA	False	NA	NA	False	AATAAA	-14	NA	58020884	58014306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843
ES.4951.75	chr11	-	4554	26	ISM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	26	3395	26	-3395	5prime_fragment	FALSE	canonical	3	150	junction_8	33.4197546370407	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTAATCTGTTGATTA	NA	False	NA	NA	False	AGTAAA	-15	NA	58059339	58015510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.76	chr11	-	3856	24	ISM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	13	7166	13	-7166	5prime_fragment	FALSE	canonical	3	119	junction_6	36.1228736921735	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGATGGCAGATCCAAG	NA	False	NA	NA	False	AATACA	-16	NA	58059352	58019281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.77	chr11	-	214	1	Intergenic	novelGene_3918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAGAAAAGTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	58039662	58039448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58039400_58039700
ES.4951.78	chr11	-	1067	6	ISM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	26	39323	26	-5584	5prime_fragment	FALSE	canonical	3	186	junction_5	27.9241830677282	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTATGTTGTCATTGT	NA	False	NA	NA	False	AATACA	-10	NA	58059339	58051438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ES.4951.8	chr11	-	4555	18	NNC	ENSMUSG00000037275.15	novel	4919	28	NA	NA	10204	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	76.7640072089008	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGCTCTTTTCTTTATC	NA	False	NA	-1	True	ATTAAA	-20	NA	58041390	58010828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58012611_58013107_58013202_58015757_58016260_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371
ES.4952.1	chr11	+	1027	8	NNC	ENSMUSG00000020514.9	novel	722	7	NA	NA	-1271	13	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	468.490498237451	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTGAAGTGTAGTGTA	210	False	NA	25	True	AGTAAA	-28	NA	58061215	58070404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58061353_58062331_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ES.4952.2	chr11	+	898	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	483.207138698187	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTCATTGAATTATT	1484	False	NA	12	True	AGTAAA	-15	NA	58062489	58070391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ES.4952.3	chr11	+	2080	7	Fusion	ENSMUSG00000020514.9_ENSMUSG00000082292.4	novel	722	7	NA	NA	6	378	multi-exon	FALSE	canonical	1	2	junction_6	492.061790383642	155	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGGAAGATTTTTTTT	1487	False	NA	NA	False	NA	NA	NA	58062492	58080216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58078564
ES.4953.1	chr11	-	178	1	Intergenic	novelGene_3919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATACCTT	NA	False	NA	NA	False	NA	NA	NA	58061547	58061369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58061400_58061500
ES.4954.1	chr11	+	1927	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	65	30	33	-4	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCTAAAAACATTAAAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	58090446	58098387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58090606_58092293_58092544_58096869
ES.4955.1	chr11	-	170	1	Intergenic	novelGene_3920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58094360	58094190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58094200_58094400
ES.4956.1	chr11	+	3528	2	FSM	ENSMUSG00000069874.8	ENSMUST00000108836.2	3459	2	-73	4	-53	-4	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGATGTATTATTTTT	1521	False	NA	NA	False	AATAAA	-19	NA	58105780	58113601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58105997_58110289
ES.4957.1	chr11	-	4194	2	Intergenic	novelGene_3921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTTTCTGTTTGTC	9019	False	NA	NA	False	NA	NA	NA	58130526	58125264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58129258_58130325
ES.4958.1	chr11	+	1166	1	NIC	ENSMUSG00000069873.5	novel	2093	7	NA	NA	18063	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGTTTCATTTTTAT	7	False	NA	NA	False	AATAAA	-13	NA	58183948	58185114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58183900_58185100
ES.4959.1	chr11	+	121	1	Intergenic	novelGene_3922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCCTGTCTCAAAAAACA	631	False	NA	NA	False	NA	NA	NA	58190852	58190973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58190900_58191000
ES.496.1	chr1	+	475	1	FSM	ENSMUSG00000100215.2	ENSMUST00000162574.2	396	1	51	-130	51	130	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGGGAAGTCATGCC	NA	False	NA	NA	False	AAAAAG	-41	NA	55374610	55375085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_55374600_55375100
ES.4960.1	chr11	-	168	1	Intergenic	novelGene_3923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAACGACAGA	9695	False	NA	NA	False	NA	NA	NA	58195229	58195061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58195100_58195200
ES.4961.1	chr11	-	131	1	Intergenic	novelGene_3924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAAACCAAAA	8641	False	NA	NA	False	NA	NA	NA	58196283	58196152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58196200_58196300
ES.4962.1	chr11	+	1903	12	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.3946830209872	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTGGTGCTACAGA	7651	False	NA	11	True	AATAAA	-18	NA	58197872	58205436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200782_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.10	chr11	+	2241	11	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	4	junction_5	45.967488510903	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7669	False	NA	7	True	AATAAA	-14	NA	58197890	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200346_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.11	chr11	+	3486	8	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	82	junction_1	28.3685655295449	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7670	False	NA	7	True	AATAAA	-14	NA	58197891	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.12	chr11	+	3238	9	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	82	junction_1	29.1115848933032	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7671	False	NA	12	True	AATAAA	-19	NA	58197892	58205437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.13	chr11	+	4953	4	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	126	junction_1	21.4165045389453	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7671	False	NA	13	True	AATAAA	-20	NA	58197892	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58200267_58200353_58202397_58204791_58204892_58205002
ES.4962.14	chr11	+	2035	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-2	1	intron_retention	FALSE	canonical	0	0	junction_6	46.8085462282263	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGGTGCTACAGATATA	7671	False	NA	15	True	AATAAA	-22	NA	58197892	58205440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.15	chr11	+	3571	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	82	junction_1	30.6363074363301	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7671	False	NA	9	True	AATAAA	-16	NA	58197892	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58202397_58204791_58204892_58205002
ES.4962.16	chr11	+	1970	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-105	-5	-2	5	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCTGGGAGTCTTTT	7671	False	NA	33	True	AATAAA	-40	NA	58197892	58205458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.17	chr11	+	3593	7	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	39	junction_1	45.852723171282	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7671	False	NA	9	True	AATAAA	-16	NA	58197892	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.18	chr11	+	2337	10	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-7	intron_retention	FALSE	canonical	0	0	junction_5	49.271983875847	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7672	False	NA	7	True	AATAAA	-14	NA	58197893	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200330_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.19	chr11	+	5033	3	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	158	junction_2	10	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7672	False	NA	7	True	AATAAA	-14	NA	58197893	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58202397_58204791_58204892_58205002
ES.4962.2	chr11	+	3212	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-21	-5	intron_retention	FALSE	canonical	3	82	junction_1	26.5139143530522	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7652	False	NA	9	True	AATAAA	-16	NA	58197873	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.20	chr11	+	3654	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	82	junction_1	30.5963868600344	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7672	False	NA	13	True	AATAAA	-20	NA	58197893	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.21	chr11	+	2244	11	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	47.0272261567701	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7672	False	NA	7	True	AATAAA	-14	NA	58197893	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200204_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.22	chr11	+	3652	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	82	junction_1	33.1712727119918	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7672	False	NA	7	True	AATAAA	-14	NA	58197893	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.23	chr11	+	3296	8	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	39	junction_1	40.2720341514292	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATGCTTTGGTGCTAC	7672	False	NA	8	True	AATAAA	-15	NA	58197893	58205433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58202397_58204791_58204892_58205002
ES.4962.24	chr11	+	3502	8	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	0	-7	intron_retention	FALSE	canonical	3	39	junction_1	42.452374275565	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7673	False	NA	7	True	AATAAA	-14	NA	58197894	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.25	chr11	+	2159	11	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_5	57.7045058899216	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7675	False	NA	7	True	AATAAA	-14	NA	58197896	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200346_58200496_58200782_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.26	chr11	+	2865	12	Fusion	ENSMUSG00000087347.2_ENSMUSG00000037243.18	novel	1860	12	NA	NA	2	1	intron_retention	FALSE	canonical	0	0	junction_11	44.8549544883144	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTTGTGTATGA	7675	False	NA	NA	False	AATAAA	-12	NA	58197896	58215266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002_58205349_58214545
ES.4962.27	chr11	+	1695	12	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	55.6075385816297	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7675	False	NA	7	True	AATAAA	-14	NA	58197896	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58197976_58198475_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.28	chr11	+	4069	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_4	58.0011973056496	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7679	False	NA	13	True	AATAAA	-20	NA	58197900	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58200492_58200779_58202397_58204791_58204892_58205002
ES.4962.29	chr11	+	3022	11	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_6	55.8953486436931	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTGGTGCTACAGA	7681	False	NA	11	True	AATAAA	-18	NA	58197902	58205436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198713_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.3	chr11	+	3333	8	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-19	-7	intron_retention	FALSE	canonical	3	82	junction_1	28.9327157525236	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7654	False	NA	7	True	AATAAA	-14	NA	58197875	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.30	chr11	+	4770	4	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	8	-6	intron_retention	FALSE	canonical	3	82	junction_1	41.3548331180555	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATGCTTTGGTGCTAC	7681	False	NA	8	True	AATAAA	-15	NA	58197902	58205433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58202397_58204791_58204892_58205002
ES.4962.31	chr11	+	1868	11	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.6975627330851	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTATGCTTTGGTGC	7682	False	NA	5	True	AATAAA	-12	NA	58197903	58205430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198399_58198588_58199597_58199885_58200217_58200267_58200346_58200492_58200782_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204896_58205002
ES.4962.32	chr11	+	4687	5	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	9	-1	intron_retention	FALSE	canonical	3	82	junction_1	36.2767142944341	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7682	False	NA	13	True	AATAAA	-20	NA	58197903	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200267_58200353_58202397_58204791_58204892_58205002
ES.4962.33	chr11	+	1330	2	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	-90	5961	13	-5947	intron_retention	FALSE	canonical	3	82	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGATTAGAAAAAAAC	7686	False	NA	NA	False	NA	NA	NA	58197907	58199492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58198083_58198337
ES.4962.34	chr11	+	3630	7	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	13	-5	intron_retention	FALSE	canonical	0	0	junction_1	58.2764007887317	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7686	False	NA	9	True	AATAAA	-16	NA	58197907	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198343_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.35	chr11	+	4695	4	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	20	-7	intron_retention	FALSE	canonical	3	39	junction_1	61.3568795382121	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7693	False	NA	7	True	AATAAA	-14	NA	58197914	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58202397_58204791_58204892_58205002
ES.4962.36	chr11	+	3801	5	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	20	-4	intron_retention	FALSE	canonical	3	82	junction_1	36.3730669589464	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTTGGTGCTACAG	7693	False	NA	10	True	AATAAA	-17	NA	58197914	58205435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.37	chr11	+	3913	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	20	1744	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGCACTTGTGTGGTT	7693	False	NA	NA	False	ACTAAA	-13	NA	58197914	58207197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.38	chr11	+	3710	6	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	26	-2	intron_retention	FALSE	canonical	3	82	junction_1	33.2361249245456	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7699	False	NA	12	True	AATAAA	-19	NA	58197920	58205437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200267_58200353_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.39	chr11	+	3960	8	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	27	-5	intron_retention	FALSE	canonical	0	0	junction_4	54.0736459254734	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7700	False	NA	9	True	AATAAA	-16	NA	58197921	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58200492_58200779_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.4	chr11	+	3746	6	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-12	-7	intron_retention	FALSE	canonical	3	82	junction_1	33.0115131431445	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7661	False	NA	7	True	AATAAA	-14	NA	58197882	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.40	chr11	+	4604	5	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	28	-3	intron_retention	FALSE	canonical	3	39	junction_1	53.1383806678374	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTGGTGCTACAGA	7701	False	NA	11	True	AATAAA	-18	NA	58197922	58205436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58200267_58200353_58202397_58204791_58204892_58205002
ES.4962.42	chr11	+	2998	6	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	29	-8	intron_retention	FALSE	canonical	3	82	junction_1	34.0352758178922	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTATGCTTTGGTGCT	7702	False	NA	6	True	AATAAA	-13	NA	58197923	58205431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198831_58199620_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.43	chr11	+	1832	12	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	29	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.0181370077688	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAAGTGTATGCTTTGGT	7702	False	NA	3	True	AATAAA	-10	NA	58197923	58205428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198399_58198573_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.44	chr11	+	3576	6	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	29	-9	intron_retention	FALSE	canonical	3	82	junction_1	33.8088745745847	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTATGCTTTGGTGC	7702	False	NA	5	True	AATAAA	-12	NA	58197923	58205430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198588_58198798_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.46	chr11	+	3980	7	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	29	-5	intron_retention	FALSE	canonical	0	0	junction_4	63.5155274104075	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATGCTTTGGTGCTACA	7702	False	NA	9	True	AATAAA	-16	NA	58197923	58205434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58199885_58200217_58200267_58200353_58200492_58200779_58202397_58204791_58204892_58205002
ES.4962.47	chr11	+	2627	8	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	29	-7	intron_retention	FALSE	canonical	0	0	junction_3	55.8441709453317	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7702	False	NA	7	True	AATAAA	-14	NA	58197923	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198831_58199620_58200492_58200779_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.48	chr11	+	4181	6	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	29	517	intron_retention	FALSE	canonical	3	39	junction_1	48.8532496360273	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTAGGCATTTGTCA	7702	False	NA	NA	False	NA	NA	NA	58197923	58205970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.49	chr11	+	3498	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	30	-2	intron_retention	FALSE	canonical	3	82	junction_1	31.061319282277	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7703	False	NA	12	True	AATAAA	-19	NA	58197924	58205437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198588_58198798_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.5	chr11	+	2455	10	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-12	-2	intron_retention	FALSE	canonical	2	4	junction_2	48.2756999936463	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7661	False	NA	12	True	AATAAA	-19	NA	58197882	58205437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198713_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.50	chr11	+	4123	8	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	50	-7	intron_retention	FALSE	canonical	0	0	junction_3	59.2083833005194	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7723	False	NA	7	True	AATAAA	-14	NA	58197944	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.51	chr11	+	3350	7	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-50	-2	intron_retention	FALSE	canonical	3	82	junction_1	31.122071482042	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTGGTGCTACAGAT	7726	False	NA	12	True	AATAAA	-19	NA	58197947	58205437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58199885_58200217_58200267_58200353_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.52	chr11	+	4532	6	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-27	-9	intron_retention	FALSE	canonical	3	82	junction_1	34.9914275216088	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTATGCTTTGGTGC	7749	False	NA	5	True	AATAAA	-12	NA	58197970	58205430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200999_58201081_58201160_58201243_58202397_58204791_58204892_58205002
ES.4962.53	chr11	+	3193	9	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	39	junction_1	39.7725957790034	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTGGTGCTACAGA	7775	False	NA	11	True	AATAAA	-18	NA	58197996	58205436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58198588_58198798_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.54	chr11	+	2047	9	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	546	-7	intron_retention	FALSE	canonical	3	103	junction_4	23.3422230089595	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	8322	False	NA	7	True	AATAAA	-14	NA	58198543	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.55	chr11	+	1332	9	NNC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	1747	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.9783617829813	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	3	True	NA	7	True	AATAAA	-14	NA	58199744	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58199885_58200217_58200267_58200353_58200492_58200782_58200999_58201094_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.56	chr11	+	965	1	NIC	ENSMUSG00000087347.2	novel	886	2	NA	NA	487	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTGTGTATG	6974	False	NA	NA	False	AATAAA	-11	NA	58214300	58215265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58214300_58215300
ES.4962.6	chr11	+	2186	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7661	False	NA	13	True	AATAAA	-20	NA	58197882	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.7	chr11	+	2479	10	NNC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-9	-7	intron_retention	FALSE	canonical	0	0	junction_4	49.5582958883578	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7664	False	NA	7	True	AATAAA	-14	NA	58197885	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58198083_58198337_58198831_58199620_58200267_58200353_58200476_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.8	chr11	+	2243	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTGGTGCTACAGATA	7666	False	NA	13	True	AATAAA	-20	NA	58197887	58205438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4962.9	chr11	+	3568	8	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	82	junction_1	30.8379569984254	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATGCTTTGGTGCTA	7669	False	NA	7	True	AATAAA	-14	NA	58197890	58205432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58198083_58198337_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ES.4963.1	chr11	-	4636	1	Genic_Genomic	ENSMUSG00000049755.15	novel	NA	NA	NA	NA	-1022	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAAGTATTCAACAGTC	NA	False	NA	NA	False	AATAAA	-21	NA	58215194	58210558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_58210600_58215200
ES.4963.2	chr11	-	457	3	FSM	ENSMUSG00000049755.15	ENSMUST00000130217.2	423	3	-34	0	-2	0	multi-exon	FALSE	canonical	3	16	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGTAAAGTATTCAA	613	False	NA	NA	False	AATAAA	-16	NA	58214174	58210563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58210781_58213394_58213556_58214095
ES.4963.3	chr11	-	417	3	FSM	ENSMUSG00000049755.15	ENSMUST00000135097.8	426	3	-26	35	6	-1	multi-exon	FALSE	canonical	3	24	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAGTAAAGTATTCA	621	False	NA	NA	False	AATAAA	-15	NA	58214166	58210564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58210781_58213425_58213556_58214095
ES.4963.4	chr11	-	452	3	NIC	ENSMUSG00000049755.15	novel	426	3	NA	NA	-16	-39	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGACTTGCAGTTGTAA	NA	False	NA	NA	False	AATAAA	-25	NA	58221181	58210602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58210781_58213425_58213556_58221037
ES.4963.5	chr11	-	4658	2	Genic_Genomic	ENSMUSG00000049755.15	novel	697	3	NA	NA	1	2743	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATTAAGTCATACACA	NA	False	NA	NA	False	ATTAAA	-17	NA	58221164	58215297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_58216067_58217275
ES.4963.6	chr11	-	4048	1	FSM	ENSMUSG00000049755.15	ENSMUST00000185661.2	3125	1	2	-925	2	925	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGAGAGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	58221163	58217115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58217100_58221200
ES.4963.7	chr11	-	3704	1	FSM	ENSMUSG00000049755.15	ENSMUST00000185661.2	3125	1	1	-580	1	580	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAATGTTGATCTTTAAA	NA	False	NA	NA	False	AGTAAA	-10	NA	58221164	58217460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58217500_58221200
ES.4964.1	chr11	+	2247	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-46	776	-20	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGCTGTGCTGTGTGTCC	423	False	NA	NA	False	NA	NA	NA	58221529	58237775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.10	chr11	+	2211	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	26	779	0	-1	multi-exon	FALSE	canonical	3	32	junction_1	38.7101049110206	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGCTGTGCTGTGTGTCC	469	False	NA	NA	False	NA	NA	NA	58221575	58237775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.11	chr11	+	3053	8	NNC	ENSMUSG00000013646.18	novel	2977	7	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_5	56.8793926314482	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	481	False	NA	11	True	AATAAA	-12	NA	58221587	58238546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58229001_58229095_58232111_58232274_58236137_58236312_58236755
ES.4964.12	chr11	+	3095	7	NNC	ENSMUSG00000013646.18	novel	3016	7	NA	NA	34	0	intron_retention	FALSE	canonical	1	2	junction_1	49.7172561145077	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	503	False	NA	11	True	AATAAA	-12	NA	58221609	58238546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58221776_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.13	chr11	+	2998	7	NIC	ENSMUSG00000013646.18	novel	6171	5	NA	NA	7	-2	intron_retention	FALSE	canonical	1	1	junction_1	50.0854824830065	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTTTACTGTCTGTT	769	False	NA	14	True	AATAAA	-15	NA	58221875	58238549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58221942_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.14	chr11	+	2935	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	502	1	-23	-1	3prime_fragment	FALSE	canonical	3	119	junction_1	8.42377587546108	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTTACTGTCTGTTA	971	False	NA	15	True	AATAAA	-16	NA	58222077	58238550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.15	chr11	+	2547	7	NNC	ENSMUSG00000013646.18	novel	3016	7	NA	NA	-21	0	intron_retention	FALSE	canonical	0	0	junction_1	50.4537742228798	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	973	False	NA	11	True	AATAAA	-12	NA	58222079	58238546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58222277_58222658_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.16	chr11	+	2771	1	Genic_Genomic	ENSMUSG00000013646.18	novel	NA	NA	NA	NA	623	977	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTGTGCATGTAATGAG	NA	False	NA	NA	False	ATTAAA	-13	NA	58236760	58239531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_58236800_58239500
ES.4964.2	chr11	+	3025	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-46	-2	-20	-1	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTACTGTCTGTTAAAA	423	False	NA	18	True	AATAAA	-19	NA	58221529	58238553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.3	chr11	+	6876	6	NIC	ENSMUSG00000013646.18	novel	3016	7	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	32	junction_1	41.748772437043	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTGATGTTTACTGTC	438	False	NA	10	True	AATAAA	-11	NA	58221544	58238545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58236312_58236755
ES.4964.4	chr11	+	3016	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	-5	5	-5	-2	multi-exon	FALSE	canonical	3	32	junction_1	38.7101049110206	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGTTTACTGTCTGTT	438	False	NA	14	True	AATAAA	-15	NA	58221544	58238549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.5	chr11	+	1638	9	NNC	ENSMUSG00000013646.18	novel	3016	7	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	62.3987930572379	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGCTGTGCTGTGTGT	448	False	NA	NA	False	NA	NA	NA	58221554	58237773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58229001_58229095_58232111_58232274_58236137_58236312_58236755_58236847_58237531
ES.4964.6	chr11	+	2539	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	-20	458	6	317	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTCTCTATTGCTCTT	449	False	NA	NA	False	NA	NA	NA	58221555	58238093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.7	chr11	+	6005	8	NNC	ENSMUSG00000013646.18	novel	2977	7	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	56.8793926314482	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTGATGTTTACTGTC	451	False	NA	10	True	AATAAA	-11	NA	58221557	58238545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58229001_58231226_58231319_58232274_58236137_58236312_58236755
ES.4964.8	chr11	+	3133	6	NIC	ENSMUSG00000013646.18	novel	2977	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	78	junction_1	23.7368911190998	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	457	False	NA	11	True	AATAAA	-12	NA	58221563	58238546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58221619_58222079_58222690_58228562_58228904_58232111_58232274_58236137_58236312_58236755
ES.4964.9	chr11	+	3293	3	NNC	ENSMUSG00000013646.18	novel	2977	7	NA	NA	-2	3965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	39	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACCAACACAGGGTTTT	467	False	NA	NA	False	NA	NA	NA	58221573	58226300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58221619_58222079_58222834_58223806
ES.4965.1	chr11	+	1400	2	Intergenic	novelGene_3925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAGTATAAGTTA	NA	False	NA	NA	False	AATAAA	-12	NA	58252785	58257580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58253948_58257342
ES.4966.1	chr11	+	197	1	Intergenic	novelGene_3926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGACTCACTGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	58264065	58264262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58264100_58264300
ES.4967.1	chr11	-	163	1	Intergenic	novelGene_3927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAGAAAA	4026	False	NA	NA	False	NA	NA	NA	58303668	58303505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58303500_58303700
ES.4968.1	chr11	+	3660	3	FSM	ENSMUSG00000107677.3	ENSMUST00000215071.2	2719	3	-1341	400	-1341	-400	multi-exon	FALSE	canonical	3	11	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGAATGCACTTTGTCT	1806	False	NA	NA	False	AATAAA	-20	NA	58642218	58650097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58644171_58647616_58647657_58648429
ES.4968.2	chr11	+	3203	4	NNC	ENSMUSG00000107677.3	novel	2719	3	NA	NA	-1325	747	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.55777733351102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAACACCTGTTCTGTCT	1822	False	NA	NA	False	ATTAAA	-20	NA	58642234	58651244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58642396_58643983_58644171_58647616_58647657_58648429
ES.4968.3	chr11	+	2073	4	NNC	ENSMUSG00000107677.3	novel	2719	3	NA	NA	-1317	-402	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.18993502999218	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACAGAATGCACTTTGT	1830	False	NA	NA	False	AATAAA	-18	NA	58642242	58650095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58642396_58643956_58644171_58647616_58647657_58648429
ES.4968.4	chr11	+	3827	3	FSM	ENSMUSG00000107677.3	ENSMUST00000215071.2	2719	3	-1302	194	-1302	-194	multi-exon	FALSE	canonical	3	11	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTTTCTGAATATCT	1845	False	NA	NA	False	AATAAA	-25	NA	58642257	58650303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58644171_58647616_58647657_58648429
ES.4969.1	chr11	-	841	4	FSM	ENSMUSG00000049154.13	ENSMUST00000094156.12	567	4	-276	2	-276	-2	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTATGTCACAGATTGT	NA	False	NA	NA	False	AATAAA	-25	NA	58693062	58683624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
ES.497.1	chr1	-	5352	12	NNC	ENSMUSG00000025977.16	novel	882	10	NA	NA	-4	4062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.6118598863693	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAGTTTTGAGGAAA	NA	False	NA	NA	False	AATAAA	-24	NA	55402482	55283754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55288124_55335421_55335537_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ES.497.10	chr1	-	5053	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATATTAATGGTGA	NA	False	NA	NA	False	NA	NA	NA	55336774	55331721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55331700_55336800
ES.497.11	chr1	-	1397	10	FSM	ENSMUSG00000025977.16	ENSMUST00000087585.10	882	10	-516	1	-366	-1	multi-exon	FALSE	canonical	3	13	junction_5	6.71831842570265	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTTCTGGTTTTCTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	55402994	55339228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ES.497.2	chr1	-	5250	11	NNC	ENSMUSG00000025977.16	novel	882	10	NA	NA	-30	4062	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.2975725294848	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAGTTTTGAGGAAA	NA	False	NA	NA	False	AATAAA	-24	NA	55402508	55283754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_55288124_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385548_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ES.497.3	chr1	-	4980	7	NIC	ENSMUSG00000025977.16	novel	2635	10	NA	NA	-70	4053	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.92331709773613	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAATATATAAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	55402548	55283763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55288124_55309688_55309825_55343656_55343786_55344834_55344883_55362808_55362881_55399774_55399919_55402457
ES.497.4	chr1	-	5200	8	NIC	ENSMUSG00000025977.16	novel	1106	10	NA	NA	-18	4046	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	11.8166261285201	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGACTAAAGATAAATATA	NA	False	NA	NA	False	AATAAA	-8	NA	55401903	55283770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55288124_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55394806_55394899_55399774_55399919_55401640
ES.497.5	chr1	-	5192	10	NIC	ENSMUSG00000025977.16	novel	882	10	NA	NA	50	3993	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	11.1133331111555	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAATTCTCTAGCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55402578	55283823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55288124_55339245_55339345_55343656_55343786_55344834_55344883_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ES.497.6	chr1	-	5636	11	NIC	ENSMUSG00000025977.16	novel	882	10	NA	NA	-322	3993	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	8.86848352312841	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAAATTCTCTAGCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55402950	55283823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55288124_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ES.497.8	chr1	-	2573	1	Genic_Genomic	ENSMUSG00000025977.16	novel	NA	NA	NA	NA	49880	932	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACTCCTTTGACAGAAG	NA	False	NA	NA	False	AAGAAA	-8	NA	55289457	55286884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_55286900_55289500
ES.497.9	chr1	-	1472	1	NIC	ENSMUSG00000025977.16	novel	535	3	NA	NA	29647	-204	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAAAGAATTCTGATAA	NA	False	NA	NA	False	AATAAA	-20	NA	55309690	55308218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_55308200_55309700
ES.4970.1	chr11	+	4093	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	8	-1	8	1	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGAGTGGGCCTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	58737991	58752783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
ES.4970.2	chr11	+	4637	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	10	-547	10	547	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTAGGAGGCTACAACA	NA	False	NA	NA	False	NA	NA	NA	58737993	58753329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
ES.4970.3	chr11	+	3609	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	16	475	16	-475	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCTTGATCTGGGAA	NA	False	NA	NA	False	AATAAA	-10	NA	58737999	58752307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
ES.4970.5	chr11	+	4220	6	NNC	ENSMUSG00000072915.4	novel	4100	5	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.79795897113271	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCGAGTGGGCCTCT	NA	False	NA	NA	False	AATAAA	-22	NA	58737999	58752782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58738086_58739471_58739529_58741913_58742050_58745085_58745213_58746886_58746980_58749061
ES.4970.8	chr11	+	3942	3	ISM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	7099	2	-5176	-2	3prime_fragment	FALSE	canonical	2	9	junction_2	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCCGAGTGGGCCT	NA	False	NA	NA	False	AATAAA	-20	NA	58745082	58752780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58745213_58746886_58746980_58749061
ES.4970.9	chr11	+	5728	1	FSM	ENSMUSG00000072915.4	ENSMUST00000093768.4	2524	1	-2657	-547	-2657	547	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTAGGAGGCTACAACA	NA	False	NA	NA	False	NA	NA	NA	58747601	58753329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58747600_58753300
ES.4971.1	chr11	+	5853	4	NIC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	-22	10	intron_retention	FALSE	canonical	3	28	junction_1	6.16441400296898	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGCTAAAATTATGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	58758019	58774124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58758136_58759640_58759833_58767519_58769695_58770754
ES.4971.2	chr11	+	3831	5	NNC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	-5	-85	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	14.8492424049175	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTGTTCCATATG	NA	False	NA	NA	False	ATTAAA	-17	NA	58758036	58774029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58758136_58759640_58759833_58767519_58767692_58769601_58769695_58770754
ES.4971.3	chr11	+	3847	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	-5	24	-5	-24	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTAAAATGGCATTGTC	NA	False	NA	NA	False	ATTAAA	-22	NA	58758036	58774090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
ES.4971.4	chr11	+	5096	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	13	-1243	13	1243	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGAATTGATTTAGAC	NA	False	NA	NA	False	AATAAA	-18	NA	58758054	58775357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
ES.4972.1	chr11	-	3926	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	-16	-20	-16	20	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAAGTCTTGGTATT	7168	False	NA	NA	False	AATAAA	-39	NA	58795067	58778958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ES.4972.2	chr11	-	3324	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	17	549	17	-549	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGTTTCAGCCTCAC	7201	False	NA	NA	False	NA	NA	NA	58795034	58779527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ES.4972.3	chr11	-	3334	5	NNC	ENSMUSG00000037001.11	novel	3890	5	NA	NA	17	-555	intron_retention	FALSE	canonical	1	1	junction_3	20.8865985742054	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAGACCCTGGTTTCAG	7201	False	NA	NA	False	NA	NA	NA	58795034	58779533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58782373_58783787_58783881_58791390_58791534_58793568_58793734_58794940
ES.4972.4	chr11	-	3222	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	17	651	17	-651	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAGGAAATGTGTTTG	7201	False	NA	NA	False	AATGAA	-25	NA	58795034	58779629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ES.4972.5	chr11	-	2991	5	NNC	ENSMUSG00000037001.11	novel	3890	5	NA	NA	-11	-842	intron_retention	FALSE	canonical	0	0	junction_4	22.8746584673957	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTCTGTCAGAGCACA	7173	False	NA	-2	True	AATAAA	-14	NA	58795062	58779820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58795008
ES.4972.6	chr11	-	3045	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	2	843	2	-843	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTCTGTCAGAGCAC	7186	False	NA	-3	True	AATAAA	-13	NA	58795049	58779821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ES.4972.7	chr11	-	2686	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	13	1191	13	-1191	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTTTTGTCCCCAACT	7197	False	NA	NA	False	AAAAAG	-16	NA	58795038	58780169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ES.4973.1	chr11	+	171	1	Intergenic	novelGene_3928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAATTTAAAAAA	6965	False	NA	NA	False	NA	NA	NA	58797877	58798048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58797900_58798000
ES.4974.1	chr11	-	1995	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	-33	-13	-33	13	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTAGTCTTTGTCTAC	NA	False	NA	-3	True	AATAAA	-30	NA	58829775	58823100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ES.4974.12	chr11	-	3870	2	Genic_Genomic	ENSMUSG00000020496.11	novel	1949	4	NA	NA	-28	-2549	multi-exon	FALSE	canonical	1	3	junction_1	0	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATTTGGGAAGCATAA	NA	False	NA	NA	False	NA	NA	NA	58829770	58825662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_58826084_58826321
ES.4974.13	chr11	-	2679	3	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	1	-2549	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	536.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATTTGGGAAGCATAA	NA	False	NA	NA	False	NA	NA	NA	58829741	58825662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58826084_58826321_58828059_58829220
ES.4974.14	chr11	-	1322	2	Intergenic	novelGene_3929	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_1	0	642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCAAAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58827212	58825700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_58826084_58826273
ES.4974.2	chr11	-	1787	4	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	504.19506807055	677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATACCTCCTA	NA	False	NA	-15	True	AATAAA	-18	NA	58829731	58823112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58824203_58824964_58825058_58827965_58828059_58829220
ES.4974.3	chr11	-	3092	3	ISM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	20	-1	20	1	intron_retention	FALSE	canonical	3	1063	junction_2	88.5	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATACCTCCTA	NA	False	NA	-15	True	AATAAA	-18	NA	58829722	58823112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58824223_58824832_58825058_58827965
ES.4974.4	chr11	-	2034	4	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	504.19506807055	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829736	58823113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58824223_58824741_58825058_58827965_58828059_58829220
ES.4974.5	chr11	-	2548	3	NIC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	11	0	intron_retention	FALSE	canonical	3	1063	junction_1	6.5	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829731	58823113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_58825058_58827965_58828059_58829220
ES.4974.7	chr11	-	5238	3	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	-10	-1	intron_retention	TRUE	canonical	1	3	junction_1	536.5	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTTTCCATACCTCC	NA	False	NA	-17	True	AATAAA	-16	NA	58829752	58823114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58826084_58826321_58828059_58829220
ES.4974.8	chr11	-	2074	5	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	532.277359559845	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTTTCCATACCTC	NA	False	NA	-18	True	AATAAA	-15	NA	58829722	58823115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58824223_58824442_58824590_58824832_58825058_58827965_58828059_58829220
ES.4974.9	chr11	-	1928	4	NNC	ENSMUSG00000020496.11	novel	1949	4	NA	NA	35	-4	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	499.95266442601	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCTGTTTCCATACC	NA	False	NA	-20	True	AATAAA	-13	NA	58829707	58823117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58824223_58824814_58825058_58827965_58828059_58829220
ES.4975.1	chr11	+	924	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	1	1221	1	-1221	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGGAGTTTTGCTGGT	NA	False	NA	8	True	TATAAA	-24	NA	58845511	58846435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_58845500_58846400
ES.4975.2	chr11	+	3527	3	NNC	ENSMUSG00000036964.15	novel	3664	7	NA	NA	1	-14069	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACATAAAGAAGTGAGAT	NA	False	NA	NA	False	AATATA	-45	NA	58845511	58849855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58846219_58846917_58848990_58849107
ES.4976.1	chr11	-	176	1	ISM	ENSMUSG00000085379.2	ENSMUST00000131221.2	3201	2	11729	398	11729	-398	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGACAAGCCACTCC	NA	False	NA	NA	False	NA	NA	NA	58857147	58856971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_58857000_58857100
ES.4977.1	chr11	-	3857	1	Genic_Genomic	ENSMUSG00000085379.2	novel	NA	NA	NA	NA	-31	-8477	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTCTGGGTTATCA	NA	False	NA	NA	False	NA	NA	NA	58868907	58865050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_58865000_58868900
ES.4978.1	chr11	+	3527	4	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_3	37.249906785864	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1674	False	NA	15	True	AATAAA	-15	NA	58868926	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628
ES.4978.10	chr11	+	2782	4	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	4	-7096	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.4264068711929	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCTCGCCTGGTCTTTT	1693	False	NA	NA	False	NA	NA	NA	58868945	58875185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872796_58874206_58874433
ES.4978.11	chr11	+	3197	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.7624151769984	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1697	False	NA	14	True	AATAAA	-14	NA	58868949	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58880061
ES.4978.13	chr11	+	2280	6	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.0383584949441	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1701	False	NA	14	True	AATAAA	-14	NA	58868953	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58880061_58880100_58881012
ES.4978.14	chr11	+	3037	5	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.4537059332387	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1702	False	NA	15	True	AATAAA	-15	NA	58868954	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58880551_58881012
ES.4978.15	chr11	+	2288	6	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.6819281990197	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1703	False	NA	14	True	AATAAA	-14	NA	58868955	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58878458_58878507_58879628_58879756_58881012
ES.4978.16	chr11	+	3570	4	ISM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	17	2	17	0	intron_retention	FALSE	canonical	2	58	junction_2	14.4299072146089	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	1706	False	NA	12	True	AATAAA	-12	NA	58868958	58882281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550
ES.4978.17	chr11	+	2751	4	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	21	-7088	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.249906785864	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTCTTTTTGTCCTTT	1710	False	NA	NA	False	NA	NA	NA	58868962	58875193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58874206_58874433
ES.4978.18	chr11	+	9758	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	23	1	intron_retention	TRUE	non_canonical	0	0	junction_3	39.0128184062623	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGCTTATCCTGTGG	1712	False	NA	16	True	AATAAA	-16	NA	58868964	58882285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58874226_58874455_58879574_58879654
ES.4978.19	chr11	+	2602	7	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9463772249642	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1728	False	NA	14	True	AATAAA	-14	NA	58868980	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58871022_58871126_58872066_58872163_58872818_58873050_58873342_58873627_58879628_58879756_58881012
ES.4978.2	chr11	+	2267	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1676	False	NA	14	True	AATAAA	-14	NA	58868928	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
ES.4978.20	chr11	+	4730	6	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	268	0	intron_retention	FALSE	canonical	1	1	junction_3	34.5427271650633	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1957	False	NA	15	True	AATAAA	-15	NA	58869209	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58876804_58879574_58879654_58879756_58881012
ES.4978.22	chr11	+	4617	7	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	1705	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.9463772249642	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	3394	False	NA	14	True	AATAAA	-14	NA	58870646	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58871765_58872066_58872163_58872818_58873050_58873554_58873627_58876804_58878507_58879628_58879756_58881012
ES.4978.24	chr11	+	8135	3	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	4899	0	intron_retention	FALSE	non_canonical	0	0	junction_1	50	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	6588	False	NA	15	True	AATAAA	-15	NA	58873840	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58874206_58874433_58879574_58879654
ES.4978.25	chr11	+	7079	3	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	4913	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	6602	False	NA	14	True	AATAAA	-14	NA	58873854	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58874206_58874433_58878507_58879628
ES.4978.26	chr11	+	5172	3	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	6571	0	intron_retention	FALSE	non_canonical	0	0	junction_2	50	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	8260	False	NA	12	True	AATAAA	-12	NA	58875512	58882281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58879574_58879654_58879792_58881307
ES.4978.27	chr11	+	6760	1	NIC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	6583	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	8272	False	NA	15	True	AATAAA	-15	NA	58875524	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_58875500_58882300
ES.4978.28	chr11	+	4311	3	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	6652	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	8341	False	NA	14	True	AATAAA	-14	NA	58875593	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58878507_58879628_58879756_58881012
ES.4978.29	chr11	+	4469	3	NNC	ENSMUSG00000020455.17	novel	2301	7	NA	NA	7445	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	9134	False	NA	14	True	AATAAA	-14	NA	58876386	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58878507_58879628_58879756_58880061
ES.4978.3	chr11	+	3544	4	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_2	42.4264068711929	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	1676	False	NA	12	True	AATAAA	-12	NA	58868928	58882281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872796_58873050_58879628
ES.4978.30	chr11	+	4203	5	NNC	ENSMUSG00000020455.17	novel	3522	5	NA	NA	8135	0	intron_retention	FALSE	canonical	1	1	junction_1	42.4529150942547	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	9824	False	NA	12	True	AATAAA	-12	NA	58877076	58882281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58877644_58877796_58879574_58879654_58879756_58880061_58880551_58881012
ES.4978.4	chr11	+	3647	5	ISM	ENSMUSG00000020455.17	ENSMUST00000108810.10	2301	7	-8	0	-8	0	intron_retention	FALSE	canonical	1	1	junction_3	37.9761438274083	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGCTTATCCTGTG	1680	False	NA	15	True	AATAAA	-15	NA	58868932	58882284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_58869471_58872066_58872163_58872818_58873050_58878458_58878507_58879550
ES.4978.5	chr11	+	2267	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.9893077062481	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1688	False	NA	14	True	AATAAA	-14	NA	58868940	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881000
ES.4978.6	chr11	+	2249	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.6525267016199	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1690	False	NA	14	True	AATAAA	-14	NA	58868942	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58872163_58872818_58873054_58879636_58879756_58881012
ES.4978.7	chr11	+	10130	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_2	46.6556534623619	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1690	False	NA	14	True	AATAAA	-14	NA	58868942	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58872066_58874206_58874433_58879574_58879654_58879756_58880061
ES.4978.9	chr11	+	3613	5	NNC	ENSMUSG00000020455.17	novel	2251	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	25.1147367097487	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1690	False	NA	14	True	AATAAA	-14	NA	58868942	58882283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_58869471_58871022_58871126_58872066_58872163_58872818_58873050_58879628
ES.4979.1	chr11	-	4353	19	NNC	ENSMUSG00000061462.19	novel	24175	104	NA	NA	-4129	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.372677996249965	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTCTATTTCATTGAA	6911	False	NA	NA	False	AATAAA	-19	NA	58897316	58885081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_58885336_58885510_58885661_58885853_58885930_58886163_58886388_58886613_58886854_58887052_58887138_58887671_58887843_58887988_58888112_58888800_58888969_58889086_58889198_58889306_58889388_58890020_58892005_58892279_58892358_58892704_58892751_58892842_58892996_58893816_58893844_58894032_58894206_58894454_58894533_58897185
ES.498.1	chr1	-	174	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAACAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	55624226	55624052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_55624100_55624200
ES.4980.1	chr11	+	188	1	Intergenic	novelGene_3930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTTTTTAGAAGTTA	1693	False	NA	NA	False	NA	NA	NA	58980108	58980296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58980100_58980300
ES.4981.1	chr11	+	173	1	Intergenic	novelGene_3931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGTAAAAGA	10013	False	NA	NA	False	NA	NA	NA	58992188	58992361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_58992200_58992400
ES.4982.1	chr11	+	172	1	Intergenic	novelGene_3932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	59033499	59033671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59033500_59033700
ES.4983.1	chr11	-	4055	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-33	-1	-33	1	multi-exon	FALSE	canonical	3	10	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTTGTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	59054598	59046193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59049486_59049663_59050005_59054176
ES.4983.2	chr11	-	1998	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	-35	2058	-35	-2058	multi-exon	FALSE	canonical	3	10	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCAGACCTCTTGTTTC	NA	False	NA	-1	True	AGTAAA	-19	NA	59054600	59048252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59049486_59049663_59050005_59054176
ES.4984.1	chr11	-	1060	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	38	-20	38	20	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGGCTTATGGCCTCT	1508	False	NA	0	True	AATAAA	-33	NA	59082740	59074680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ES.4984.2	chr11	-	1112	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	47	4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	289.443026010513	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCACAGCCCTCCATAC	1657	False	NA	-16	True	AATAAA	-17	NA	59082591	59074696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082359
ES.4984.3	chr11	-	1041	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	124	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	290.128261572818	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCACAGCCCTCCATAC	1334	False	NA	-16	True	AATAAA	-17	NA	59082914	59074696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082753
ES.4984.4	chr11	-	4710	3	NIC	ENSMUSG00000020444.20	novel	511	4	NA	NA	-1429	1	intron_retention	FALSE	canonical	3	800	junction_1	33	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTGTCACAGCCCTCCA	4252	False	NA	-19	True	AATAAA	-14	NA	59079996	59074699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59075348_59075854_59075940_59076019
ES.4984.5	chr11	-	3679	6	NIC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	-1588	0	intron_retention	FALSE	canonical	3	680	junction_5	67.5526461361803	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	4093	False	NA	-20	True	AATAAA	-13	NA	59080155	59074700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59077268_59077599
ES.4984.6	chr11	-	1823	7	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	-20	-2	intron_retention	FALSE	canonical	2	4	junction_2	301.685266461589	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATAGTGTCACAGCCCT	1590	False	NA	-22	True	AATAAA	-11	NA	59082658	59074702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59075014_59075261_59075606_59075854_59075940_59076019_59076865_59077225_59077268_59077599_59077714_59082576
ES.4984.8	chr11	-	977	8	NNC	ENSMUSG00000020444.20	novel	1078	8	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	288.41530430111	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTATAGTGTCACAGCC	1657	False	NA	-24	True	AATAAA	-9	NA	59082591	59074704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082486
ES.4985.1	chr11	+	706	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	-14	248	-8	-2	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093303	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ES.4985.10	chr11	+	699	3	NIC	ENSMUSG00000036860.15	novel	940	4	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	260	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTCAGACTTTTGGGGT	NA	False	NA	7	True	ATTAAA	-21	NA	59093337	59096823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59093486_59095381_59095584_59096474
ES.4985.11	chr11	+	919	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	27	-6	14	6	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCAGACCTCTGGGTTT	NA	False	NA	7	True	NA	NA	NA	59093344	59096966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ES.4985.12	chr11	+	725	4	NIC	ENSMUSG00000036860.15	novel	729	4	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	265.067287054941	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093344	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59093546_59094997_59095082_59095381_59095584_59096474
ES.4985.13	chr11	+	6237	8	Fusion	ENSMUSG00000020441.7_ENSMUSG00000036860.15	novel	1285	7	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_2	169.621427217874	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTGTATATTATCTC	NA	False	NA	4	True	AGTAAA	-12	NA	59093344	59101561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_59095584_59096474_59098387_59098449_59099500_59099645_59099692_59099794_59099878_59099953_59100220_59100798_59100931_59101052
ES.4985.14	chr11	+	5240	8	Fusion	ENSMUSG00000020441.7_ENSMUSG00000036860.15	novel	1285	7	NA	NA	-16	836	intron_retention	FALSE	canonical	3	65	junction_1	160.441991551655	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACAGCTCCAGCTTCTT	NA	False	NA	NA	False	AATAAA	-28	NA	59093347	59102400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_59093486_59095381_59095584_59096474_59099500_59099645_59099692_59099794_59099878_59099953_59100220_59100798_59100931_59101052
ES.4985.15	chr11	+	2107	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	11	-833	11	833	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACAGCTCCAGCTT	NA	False	NA	NA	False	AATAAA	-25	NA	59099157	59102397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ES.4985.16	chr11	+	1270	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	15	0	15	0	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTATATTATCTCGCT	NA	False	NA	7	True	AGTAAA	-15	NA	59099161	59101564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ES.4985.17	chr11	+	1447	5	NIC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	15	-6	intron_retention	FALSE	canonical	3	128	junction_4	18.8745860881769	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099161	59101558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59099500_59099645_59099692_59099794_59100220_59100798_59100931_59101052
ES.4985.18	chr11	+	2011	8	NNC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	17	3144	intron_retention	FALSE	canonical	0	0	junction_7	56.2621415467681	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCCTTTTTTGGGGTTT	NA	False	NA	NA	False	AAAAAG	-13	NA	59099163	59104708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052_59101211_59103611
ES.4985.19	chr11	+	1368	8	NNC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	47	2387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	56.2621415467681	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTGGCTGCTTACCTT	NA	False	NA	NA	False	NA	NA	NA	59099193	59103951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052_59101355_59103611
ES.4985.2	chr11	+	727	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	-11	2	-8	-2	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093303	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ES.4985.20	chr11	+	1306	6	NIC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	49	-6	intron_retention	FALSE	canonical	3	128	junction_5	19.131126469709	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099195	59101558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59099500_59099645_59099692_59099794_59100027_59100133_59100220_59100798_59100931_59101052
ES.4985.21	chr11	+	2177	6	NIC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	51	867	intron_retention	FALSE	canonical	3	128	junction_5	19.131126469709	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAAGAAAAAAGT	NA	False	NA	NA	False	GATAAA	-32	NA	59099197	59102431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59099500_59099645_59099692_59099794_59100027_59100133_59100220_59100798_59100931_59101052
ES.4985.22	chr11	+	1161	7	NNC	ENSMUSG00000020441.7	novel	1285	7	NA	NA	75	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	60.3805064201647	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	False	NA	1	True	AGTAAA	-9	NA	59099221	59101558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101095
ES.4985.23	chr11	+	5503	3	Antisense	novelGene_ENSMUSG00000048076.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACCAATGGAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59102791	59108505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59103521_59103645_59104078_59104163
ES.4985.3	chr11	+	826	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	6	-114	3	0	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTTTGGGGTTGACT	NA	False	NA	12	True	ATTAAA	-26	NA	59093320	59096828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ES.4985.4	chr11	+	599	3	NIC	ENSMUSG00000036860.15	novel	940	4	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	260	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093326	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59093486_59095381_59095584_59096474
ES.4985.5	chr11	+	2495	2	NIC	ENSMUSG00000036860.15	novel	729	4	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	585	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093326	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59095584_59096474
ES.4985.6	chr11	+	957	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	13	-252	-3	6	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCAGACCTCTGGGTTT	NA	False	NA	7	True	NA	NA	NA	59093327	59096966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ES.4985.7	chr11	+	799	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	11	130	-2	2	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTGGGGTTGACTCT	NA	False	NA	14	True	ATTAAA	-28	NA	59093328	59096830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ES.4985.8	chr11	+	394	2	NIC	ENSMUSG00000036860.15	novel	757	4	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCTGTCATTGTCTTC	NA	False	NA	7	True	NA	NA	NA	59093329	59096712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59093486_59096474
ES.4985.9	chr11	+	2740	2	NIC	ENSMUSG00000036860.15	novel	940	4	NA	NA	7	8	intron_retention	FALSE	canonical	3	585	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACCTCTGGGTTTTA	NA	False	NA	9	True	NA	NA	NA	59093337	59096968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59095584_59096474
ES.4986.1	chr11	-	5679	5	FSM	ENSMUSG00000072898.4_ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	42	-3921	42	753	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTGTCATTTCTGAAG	1889	False	NA	NA	False	AATAAA	-28	NA	59119054	59098318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ES.4986.10	chr11	-	1809	6	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1129.41383026772	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1876	False	NA	-4	True	AATAAA	-15	NA	59119067	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59114604_59114643_59118998
ES.4986.11	chr11	-	1742	5	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_1	948.300947748129	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1889	False	NA	-4	True	AATAAA	-15	NA	59119054	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59102635_59102736_59103522_59103646_59103772_59103968_59104350_59118998
ES.4986.12	chr11	-	1731	5	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	931.597955128713	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1901	False	NA	-4	True	AATAAA	-15	NA	59119042	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59103522_59103646_59103757_59103968_59104080_59104165_59104350_59118998
ES.4986.13	chr11	-	1680	6	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	893.804989916704	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1880	False	NA	-4	True	AATAAA	-15	NA	59119063	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59102635_59102721_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ES.4986.14	chr11	-	1641	6	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	893.804989916704	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1904	False	NA	-4	True	AATAAA	-15	NA	59119039	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59102635_59102736_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ES.4986.16	chr11	-	990	3	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	852	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGGGCTTGTGTGTCAG	1890	False	NA	-5	True	AATAAA	-14	NA	59119053	59102240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59103027_59104200_59104350_59118998
ES.4986.17	chr11	-	1964	4	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	29	-4	intron_retention	FALSE	canonical	3	1704	junction_3	268.508638387835	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGATGGGCTTGTGTGT	1876	False	NA	-8	True	AATAAA	-11	NA	59119067	59102243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59103522_59103646_59104080_59104165_59104350_59118998
ES.4986.18	chr11	-	2094	2	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	32	-82	intron_retention	FALSE	canonical	3	1704	junction_1	0	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTTTGTATACTTGTT	1879	False	NA	-86	True	AATACA	-13	NA	59119064	59102321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59104350_59118998
ES.4986.2	chr11	-	5996	3	Fusion	ENSMUSG00000072898.4_ENSMUSG00000048076.15	novel	1800	5	NA	NA	-50	743	intron_retention	FALSE	non_canonical	0	0	junction_1	852	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCCTGATGTAATTGTC	1905	False	NA	NA	False	AATAAA	-18	NA	59119038	59098328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_59098380_59098444_59104350_59118998
ES.4986.20	chr11	-	1595	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	47	158	47	-158	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGGGGAAATCTCAGAA	1894	False	NA	NA	False	GATAAA	-29	NA	59119049	59102397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ES.4986.3	chr11	-	1810	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	-8	-2	-8	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTGTGTGTCAGTGC	1839	False	NA	-2	True	AATAAA	-17	NA	59119104	59102237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ES.4986.4	chr11	-	2084	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	-93	0	15	0	multi-exon	FALSE	canonical	3	71	junction_4	968.523876835259	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTGTGTGTCAGTGC	1862	False	NA	-2	True	AATAAA	-17	NA	59119081	59102237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
ES.4986.5	chr11	-	1665	5	NNC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	948.300947748129	986	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1896	False	NA	-3	True	AATAAA	-16	NA	59119047	59102238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59103522_59103646_59103772_59103968_59104020_59104192_59104350_59118998
ES.4986.6	chr11	-	2027	3	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	1704	junction_2	277	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1904	False	NA	-3	True	AATAAA	-16	NA	59119039	59102238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59103522_59103646_59104350_59118998
ES.4986.7	chr11	-	1864	4	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	23	-1	intron_retention	FALSE	canonical	3	1704	junction_3	291.466407441178	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGCTTGTGTGTCAGTG	1870	False	NA	-3	True	AATAAA	-16	NA	59119073	59102238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59103522_59103646_59103772_59103968_59104350_59118998
ES.4986.9	chr11	-	1897	4	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	28	0	intron_retention	FALSE	canonical	3	1704	junction_3	296.804088022161	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1875	False	NA	-4	True	AATAAA	-15	NA	59119068	59102239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59103772_59103968_59104080_59104165_59104350_59118998
ES.4987.1	chr11	-	2862	4	FSM	ENSMUSG00000009900.8	ENSMUST00000010044.8	2761	4	-104	3	-104	-3	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGTGGTTTGTTCTA	6070	False	NA	NA	False	AGTAAA	-16	NA	59181682	59138861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59140936_59147105_59147372_59165965_59166208_59181402
ES.4988.1	chr11	-	190	1	Intergenic	novelGene_3933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATTTTACATGTATA	9672	False	NA	-4	True	NA	NA	NA	59192053	59191863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59191900_59192100
ES.4989.1	chr11	+	3340	4	FSM	ENSMUSG00000000126.12	ENSMUST00000108783.4	3318	4	-31	9	-29	-9	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAACCTAAGTCCGATGT	5587	False	NA	NA	False	AATAAA	-16	NA	59197724	59224369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59197894_59218389_59218647_59219327_59219591_59221718
ES.499.1	chr1	+	3189	5	ISM	ENSMUSG00000038349.11	ENSMUST00000042986.10	6580	6	289822	2683	-6282	-2683	3prime_fragment	FALSE	canonical	0	0	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATTTTACTGTAGTTA	NA	False	NA	NA	False	CATAAA	-18	NA	55734901	55790761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_55737379_55741088_55741293_55752579_55752656_55754652_55754763_55790439
ES.4990.1	chr11	+	159	1	Intergenic	novelGene_3934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	59244720	59244879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59244700_59244900
ES.4991.1	chr11	-	183	1	Intergenic	novelGene_3935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGCCCCTAAAACC	NA	False	NA	NA	False	NA	NA	NA	59247137	59246954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59247000_59247100
ES.4992.1	chr11	+	179	1	Intergenic	novelGene_3936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59250349	59250528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59250300_59250500
ES.4993.1	chr11	-	2505	5	NNC	ENSMUSG00000049291.7	novel	1243	5	NA	NA	78	1521	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	5.1720402163943	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	59266405	59261973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59263997_59264251_59264395_59265172_59265264_59265982_59266146_59266320
ES.4993.2	chr11	-	2798	5	FSM	ENSMUSG00000049291.7	ENSMUST00000061481.7	1243	5	-37	-1518	-37	1518	multi-exon	FALSE	canonical	2	4	junction_3	3.57071421427143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	59266520	59261976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59263997_59264251_59264395_59264991_59265264_59265982_59266146_59266320
ES.4993.3	chr11	-	2649	5	NNC	ENSMUSG00000049291.7	novel	1243	5	NA	NA	-3	1518	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4.24264068711928	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	59266486	59261976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59263997_59264251_59264395_59264991_59265149_59265982_59266146_59266320
ES.4993.4	chr11	-	1281	5	FSM	ENSMUSG00000049291.7	ENSMUST00000061481.7	1243	5	-34	-4	-34	4	multi-exon	FALSE	canonical	2	4	junction_3	3.57071421427143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTCAGAGCTCCCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	59266517	59263490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59263997_59264251_59264395_59264991_59265264_59265982_59266146_59266320
ES.4993.5	chr11	-	716	3	NNC	ENSMUSG00000049291.7	novel	1243	5	NA	NA	1874	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	3.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGCCTCAGAGCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	59264609	59263494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59263997_59264251_59264395_59264538
ES.4994.1	chr11	+	737	4	NNC	ENSMUSG00000086910.2	novel	659	3	NA	NA	277	18829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGGTTCTCTAGTCT	NA	False	NA	NA	False	AATAAA	-8	NA	59266563	59289560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59266712_59269251_59269320_59270565_59270853_59289326
ES.4994.2	chr11	+	174	1	Intergenic	novelGene_3938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59282517	59282691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59282500_59282700
ES.4994.3	chr11	+	1449	1	Intergenic	novelGene_3939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGTGGTTTTGGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59283644	59285093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59283600_59285100
ES.4995.1	chr11	-	172	1	Intergenic	novelGene_3937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	59277339	59277167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59277200_59277300
ES.4996.1	chr11	+	176	1	Intergenic	novelGene_3940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATTTAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	59291306	59291482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59291300_59291500
ES.4997.1	chr11	+	2367	1	Antisense	novelGene_ENSMUSG00000009894.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCAACCAAGTGCATT	4115	False	NA	NA	False	NA	NA	NA	59311042	59313409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59311000_59313400
ES.4997.2	chr11	+	2525	4	Antisense	novelGene_ENSMUSG00000009894.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGCCACTCGGCGAGC	4115	False	NA	NA	False	NA	NA	NA	59311042	59340820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59312476_59319166_59319640_59328803_59329343_59340740
ES.4997.3	chr11	+	7663	1	Antisense	novelGene_ENSMUSG00000009894.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGACCCAATCTACTTA	4115	False	NA	NA	False	NA	NA	NA	59311042	59318705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59311000_59318700
ES.4997.4	chr11	+	178	1	Intergenic	novelGene_3941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	8676	False	NA	NA	False	NA	NA	NA	59315603	59315781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59315600_59315800
ES.4998.1	chr11	+	4442	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	1	-92	1	-2	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTATGTGGTTTTAA	9482	False	NA	99	True	NA	NA	NA	59340871	59349391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ES.4998.10	chr11	+	1751	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	31	2577	31	-116	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTATGTATGTATG	9512	False	NA	NA	False	NA	NA	NA	59340901	59346816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.11	chr11	+	4298	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGTAACCCCAGCACTT	9515	False	NA	5	True	NA	NA	NA	59340904	59349297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344336_59344472_59344634_59344886_59345758_59345906_59346132
ES.4998.12	chr11	+	4077	5	NIC	ENSMUSG00000036819.15	novel	4359	6	NA	NA	34	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	15.3785564992297	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACACCTGTAACCCCAG	9515	False	NA	0	True	NA	NA	NA	59340904	59349292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59346132
ES.4998.13	chr11	+	4276	6	FSM	ENSMUSG00000036819.15	ENSMUST00000045279.13	4315	6	34	5	34	-5	multi-exon	FALSE	canonical	0	0	junction_3	19.0326036053925	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACCTGTAACCCCAGCA	9515	False	NA	2	True	NA	NA	NA	59340904	59349294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344653_59344886_59345758_59345906_59346132
ES.4998.14	chr11	+	3973	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	42	344	-34	-250	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTCTTTGAAATAGAGA	9523	False	NA	NA	False	AATAAA	-15	NA	59340912	59349049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.15	chr11	+	1854	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	42	2463	-34	-2	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTTCCTTTTTTA	9523	False	NA	13	True	NA	NA	NA	59340912	59346930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.16	chr11	+	4058	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	44	249	-32	-249	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCTTTGAAATAGAGAA	9525	False	NA	NA	False	AATAAA	-16	NA	59340914	59349050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ES.4998.17	chr11	+	1915	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGGGAGTTCCTTTTTT	9530	False	NA	12	True	NA	NA	NA	59340919	59346929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344336_59344472_59344634_59344886_59345758_59345906_59346132
ES.4998.18	chr11	+	3989	6	NNC	ENSMUSG00000036819.15	novel	4359	6	NA	NA	-15	-249	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	18.3128370276154	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCTTTGAAATAGAGAA	9542	False	NA	NA	False	AATAAA	-16	NA	59340931	59349050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344336_59344506_59344703_59344886_59345758_59345906_59346132
ES.4998.19	chr11	+	5651	6	FSM	ENSMUSG00000036819.15	ENSMUST00000045279.13	4315	6	82	-1418	6	1324	multi-exon	FALSE	canonical	0	0	junction_3	19.0326036053925	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	9563	False	NA	17	True	NA	NA	NA	59340952	59350717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344653_59344886_59345758_59345906_59346132
ES.4998.2	chr11	+	5766	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	3	-1418	3	1324	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	9484	False	NA	17	True	NA	NA	NA	59340873	59350717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ES.4998.20	chr11	+	3961	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	49	-248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTTTGAAATAGAGAAT	9606	False	NA	NA	False	AATAAA	-17	NA	59340995	59349051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344336_59344472_59344634_59344886_59345758_59345906_59346132
ES.4998.21	chr11	+	5786	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	128	-1563	52	1469	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCCCTAGTCATCAGGG	9609	False	NA	NA	False	AATAAA	-14	NA	59340998	59350862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ES.4998.22	chr11	+	3629	4	ISM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	3463	99	3387	-5	3prime_fragment	FALSE	canonical	3	27	junction_1	12.8322510366134	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACCTGTAACCCCAGCA	NA	False	NA	2	True	NA	NA	NA	59344333	59349294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.3	chr11	+	1844	6	FSM	ENSMUSG00000036819.15	ENSMUST00000045279.13	4315	6	20	2451	20	-84	multi-exon	FALSE	canonical	0	0	junction_3	19.0326036053925	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCTCATCCTCTAGTT	9501	False	NA	-69	True	NA	NA	NA	59340890	59346848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344653_59344886_59345758_59345906_59346132
ES.4998.4	chr11	+	5573	6	NNC	ENSMUSG00000036819.15	novel	4359	6	NA	NA	23	1322	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	22.2854212434946	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	9504	False	NA	15	True	NA	NA	NA	59340893	59350715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344455_59344506_59344703_59344886_59345758_59345906_59346132
ES.4998.5	chr11	+	5777	6	NNC	ENSMUSG00000036819.15	novel	4351	6	NA	NA	23	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.0326036053925	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	9504	False	NA	14	True	NA	NA	NA	59340893	59350714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59341339_59341500_59341667_59344336_59344506_59344617_59344886_59345758_59345906_59346132
ES.4998.6	chr11	+	4332	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	27	0	27	0	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTATGTGGTTTTAACG	9508	False	NA	101	True	NA	NA	NA	59340897	59349393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.7	chr11	+	5654	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	29	-1324	29	1324	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	9510	False	NA	17	True	NA	NA	NA	59340899	59350717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4998.8	chr11	+	1991	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	30	2330	30	37	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTACCCTGTAGCTG	9511	False	NA	52	True	NA	NA	NA	59340900	59346969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ES.4998.9	chr11	+	1978	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	31	2350	31	111	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTGGTTGCTGGGATT	9512	False	NA	NA	False	NA	NA	NA	59340901	59347043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ES.4999.1	chr11	-	5383	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	6	-3493	6	3493	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTGTTGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	59340819	59294466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.10	chr11	-	1931	5	NNC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.046997022184	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGGAGCCGGGTCTAT	NA	False	NA	-5	True	NA	NA	NA	59340839	59297967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59298666_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.11	chr11	-	1950	6	NNC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.457272700982	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGAGGAGCCGGGTCT	NA	False	NA	-7	True	NA	NA	NA	59340839	59297969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59298637_59312350_59312476_59313493_59313544_59319166_59319640_59328803_59329340_59340740
ES.4999.13	chr11	-	2042	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-28	-1	combination_of_known_junctions	TRUE	canonical	3	5	junction_5	134.676798298742	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAGAGGAGCCGGGTC	NA	False	NA	-8	True	NA	NA	NA	59340861	59297970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333739_59340740
ES.4999.14	chr11	-	1949	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAGAGGAGCCGGGTC	NA	False	NA	-8	True	NA	NA	NA	59340839	59297970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
ES.4999.15	chr11	-	2023	6	NNC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	133.846778071047	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTTACATCAGAGGAGC	NA	False	NA	-14	True	NA	NA	NA	59340839	59297976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59298637_59301072_59301203_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.16	chr11	-	2048	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-10	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	135.952344591772	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACTTACATCAGAGGAG	NA	False	NA	-15	True	NA	NA	NA	59340752	59297977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333739_59340618
ES.4999.2	chr11	-	3732	4	ISM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	11981	-2416	9473	2416	3prime_fragment	FALSE	canonical	3	264	junction_2	16.7531091641721	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAATTGTGTTGATTA	NA	False	NA	NA	False	NA	NA	NA	59328844	59295543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803
ES.4999.3	chr11	-	4199	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-14	2228	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	136.373604484152	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTGAGCAAGCCAGTA	NA	False	NA	NA	False	NA	NA	NA	59340847	59295731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329343_59333617_59333668_59340740
ES.4999.4	chr11	-	4076	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	33	-2213	33	2213	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACAAGAAATCAAG	NA	False	NA	NA	False	NA	NA	NA	59340792	59295746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.5	chr11	-	2886	1	Genic_Genomic	ENSMUSG00000009894.16	novel	NA	NA	NA	NA	39494	2022	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTTGAGGGCTGGAGAG	NA	False	NA	NA	False	AAAAAG	-13	NA	59298823	59295937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_59295900_59298800
ES.4999.6	chr11	-	3235	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-39	-1300	-31	1300	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAATGCTGATCTATTT	NA	False	NA	NA	False	NA	NA	NA	59340864	59296659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.8	chr11	-	15614	4	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	3	264	junction_1	9.03081145609604	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGAGCCGGGTCTATAA	NA	False	NA	-3	True	NA	NA	NA	59340835	59297965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59312476_59319166_59319640_59328803_59329340_59340740
ES.4999.9	chr11	-	1932	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	-44	8	-36	2	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGGAGCCGGGTCTAT	NA	False	NA	-5	True	NA	NA	NA	59340869	59297967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ES.5.1	chr1	-	158	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	4651097	4650939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4650900_4651100
ES.50.1	chr1	-	497	2	NNC	ENSMUSG00000097797.7	novel	1193	3	NA	NA	-51	34767	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGGTTTTGTTGGTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	7468144	7384862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_7385157_7467941
ES.50.2	chr1	-	4901	1	Genic_Genomic	ENSMUSG00000097797.7	novel	NA	NA	NA	NA	27089	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGGTTGTCCGAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	7424524	7419623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_7419600_7424500
ES.50.3	chr1	-	2696	2	NIC	ENSMUSG00000097797.7	novel	1193	3	NA	NA	-49	6	intron_retention	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGGTTGTCCGAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	7468142	7419623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_7422119_7467941
ES.500.1	chr1	-	6246	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATGGCCTAG	NA	False	NA	NA	False	NA	NA	NA	56137772	56131526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_56131500_56137800
ES.5000.1	chr11	-	6630	2	Antisense	novelGene_ENSMUSG00000036819.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCTAAAATTCCAAGC	NA	False	NA	NA	False	NA	NA	NA	59350313	59343461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_59345899_59346120
ES.5000.2	chr11	-	5725	3	Antisense	novelGene_ENSMUSG00000036819.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59350313	59343488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_59344883_59345755_59345902_59346128
ES.5001.1	chr11	-	2859	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	-46	599	-46	-599	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGTCTGTAGCTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59363346	59352621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
ES.5001.2	chr11	-	2703	3	NIC	ENSMUSG00000054519.9	novel	3412	4	NA	NA	-18	-600	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTGTCTGTAGCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	59363318	59352622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59355113_59355837_59355899_59363166
ES.5001.3	chr11	-	2619	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	11	782	11	-782	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATGTATATACATG	NA	False	NA	NA	False	AATATA	-21	NA	59363289	59352804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
ES.5002.1	chr11	+	176	1	Intergenic	novelGene_3942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTTAAAAGGAAC	NA	False	NA	NA	False	NA	NA	NA	59366930	59367106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59366900_59367100
ES.5003.1	chr11	+	1817	4	NIC	ENSMUSG00000072893.13	novel	1883	5	NA	NA	-22	-3	intron_retention	FALSE	canonical	1	2	junction_2	4.18993502999218	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTCTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	59396465	59401896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59397713_59398016_59398139_59400479_59400577_59401545
ES.5003.2	chr11	+	1885	4	NNC	ENSMUSG00000072893.13	novel	1414	4	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_3	5.24933858267454	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCATTGTGCAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59396471	59400929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59397713_59398016_59398139_59398656_59398729_59400479
ES.5003.3	chr11	+	1903	5	FSM	ENSMUSG00000072893.13	ENSMUST00000145533.8	1883	5	-23	3	0	-3	multi-exon	FALSE	canonical	2	5	junction_3	3.08220700148449	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTCTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	59396487	59401896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59397713_59398016_59398139_59398656_59398765_59400479_59400577_59401545
ES.5003.4	chr11	+	2050	5	NNC	ENSMUSG00000072893.13	novel	1883	5	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_2	4.9180788932265	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTCTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	59396501	59401896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59397713_59398016_59398139_59398764_59399034_59400479_59400577_59401545
ES.5003.5	chr11	+	2047	5	NNC	ENSMUSG00000072893.13	novel	2624	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_2	4.54835134966506	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTCATTGTGCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	59396504	59400928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59397713_59398016_59398139_59398322_59398483_59398656_59398765_59400479
ES.5003.6	chr11	+	3872	3	ISM	ENSMUSG00000072893.13	ENSMUST00000145533.8	1883	5	692	3	224	-3	intron_retention	FALSE	canonical	3	10	junction_2	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGGCTCTATTGCATT	NA	False	NA	NA	False	NA	NA	NA	59397202	59401896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59397713_59398016_59398139_59398656
ES.5003.7	chr11	+	4694	2	FSM	ENSMUSG00000072893.13	ENSMUST00000132226.2	3184	2	-276	-1234	239	316	multi-exon	FALSE	canonical	3	12	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTGTTTTCTCAATAC	NA	False	NA	NA	False	NA	NA	NA	59397217	59402215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59397713_59398016
ES.5003.8	chr11	+	3094	3	NIC	ENSMUSG00000072893.13	novel	1414	4	NA	NA	-136	0	intron_retention	FALSE	canonical	1	2	junction_2	5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCATTGTGCAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	59397357	59400929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59397713_59398016_59398483_59398656
ES.5003.9	chr11	+	2901	1	NIC	ENSMUSG00000072893.13	novel	2624	5	NA	NA	-439	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTTTCATTGTGCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	59398027	59400928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59398000_59400900
ES.5004.1	chr11	+	176	1	Intergenic	novelGene_3943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	59402955	59403131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59403000_59403100
ES.5005.12	chr11	-	3667	10	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-77	-3	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	43.6750062717741	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTTCTTCTATCCT	NA	False	NA	-4	True	AATAAA	-22	NA	59397123	59376348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
ES.5005.15	chr11	-	3885	11	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	54	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.8503186057646	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTTCTTCTATCCT	4105	False	NA	-4	True	AATAAA	-22	NA	59417523	59376348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59401564_59401666_59417319
ES.5005.16	chr11	-	3901	11	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.3040307354474	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGTTTTCTTCTATCC	NA	False	NA	-5	True	AATAAA	-21	NA	59397045	59376349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59389486_59389753_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ES.5005.17	chr11	-	3359	10	NIC	ENSMUSG00000020472.15	novel	3771	10	NA	NA	-63	-4	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	54.8204701787324	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGTTTTCTTCTATCC	NA	False	NA	-5	True	AATAAA	-21	NA	59397109	59376349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394590_59394973_59395081_59396653_59396789_59396989
ES.5005.18	chr11	-	3507	9	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	49.3480939348218	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATAGTTTTCTTCTATC	NA	False	NA	-6	True	AATAAA	-20	NA	59397035	59376350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59378641_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ES.5005.19	chr11	-	172	1	Antisense	novelGene_ENSMUSG00000072893.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	59399440	59399268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_59399300_59399400
ES.5005.2	chr11	-	3985	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	79	0	79	0	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397391	59376345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ES.5005.5	chr11	-	4907	9	NIC	ENSMUSG00000020472.15	novel	3771	10	NA	NA	13	0	intron_retention	FALSE	canonical	2	12	junction_6	46.4554558152215	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397033	59376345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59396789_59396989
ES.5005.6	chr11	-	3390	10	FSM	ENSMUSG00000020472.15	ENSMUST00000101150.9	3771	10	381	0	-43	0	multi-exon	FALSE	canonical	2	12	junction_6	45.5777723603659	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397089	59376345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
ES.5005.8	chr11	-	3504	9	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	53.0465597376493	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397048	59376345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396989
ES.5005.9	chr11	-	3800	11	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	-14	-3	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	56.8299216962332	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTTCTTCTATCCT	NA	False	NA	-4	True	AATAAA	-22	NA	59397060	59376348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59395995_59396145_59396653_59396789_59396989
ES.5006.1	chr11	-	181	1	Intergenic	novelGene_3944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAGTGACAC	7704	False	NA	NA	False	NA	NA	NA	59442290	59442109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59442100_59442300
ES.5007.1	chr11	-	176	1	Intergenic	novelGene_3945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGGAGCAAGTGGGGCT	5157	False	NA	NA	False	NA	NA	NA	59444837	59444661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59444700_59444800
ES.5008.1	chr11	+	1552	5	ISM	ENSMUSG00000032691.15	ENSMUST00000101148.9	4021	10	12982	5	12912	-4	3prime_fragment	FALSE	canonical	0	0	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCTCTTTGCAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	59446493	59457777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ES.5009.1	chr11	-	341	1	Intergenic	novelGene_3946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCCGGTTTTACGTAA	NA	False	NA	NA	False	NA	NA	NA	59553203	59552862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59552900_59553200
ES.501.1	chr1	+	4129	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCCCAAGGAACATATTC	NA	False	NA	NA	False	AAAACA	-26	NA	56857922	56862051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_56857900_56862100
ES.501.2	chr1	+	1698	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACCACTGAGGGACTGG	NA	False	NA	NA	False	NA	NA	NA	56857922	56859620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_56857900_56859600
ES.5010.1	chr11	+	4246	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	-107	4627	-95	4	multi-exon	TRUE	canonical	3	400	junction_2	48.3490381455828	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCTCTCATTCCTTCCT	3478	False	NA	21	True	ATTAAA	-18	NA	59553225	59667053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.10	chr11	+	4040	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	109.080236220336	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3559	False	NA	16	True	ATTAAA	-13	NA	59553306	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.11	chr11	+	1811	11	ISM	ENSMUSG00000005417.18	ENSMUST00000072031.13	8718	23	-14	35846	-14	-4551	5prime_fragment	FALSE	canonical	3	400	junction_2	33.4251402390476	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGTGGGCTTTGACTAC	3559	False	NA	NA	False	NA	NA	NA	59553306	59635840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577
ES.5010.13	chr11	+	3905	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.351716018125	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3563	False	NA	12	True	ATTAAA	-9	NA	59553310	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553400_59553646_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.14	chr11	+	4265	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.996372720867	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCTCTCATTCCTT	3564	False	NA	18	True	ATTAAA	-15	NA	59553311	59667050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59620037_59620146_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.16	chr11	+	4041	24	FSM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	-21	1	-9	-1	multi-exon	FALSE	canonical	3	31	junction_5	102.676193716673	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3564	False	NA	16	True	ATTAAA	-13	NA	59553311	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.17	chr11	+	4390	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	137.527566681092	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3565	False	NA	12	True	ATTAAA	-9	NA	59553312	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635256_59635497_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.18	chr11	+	4141	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	108.635339788854	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3572	False	NA	16	True	ATTAAA	-13	NA	59553319	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663038_59666341
ES.5010.2	chr11	+	5455	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-34	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	140.132916814716	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3539	False	NA	12	True	ATTAAA	-9	NA	59553286	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59633126_59634406_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.20	chr11	+	6273	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_11	183.975876853159	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3572	False	NA	16	True	ATTAAA	-13	NA	59553319	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59631141_59631334_59632088_59632816_59632925_59634596_59635647_59638983_59639083_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.23	chr11	+	9092	26	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	1	intron_retention	FALSE	canonical	2	4	junction_11	178.334813202583	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATATGGCTGCTGACTT	3574	False	NA	NA	False	AATAAA	-23	NA	59553321	59671687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59618733_59618802_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635256_59635497_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.24	chr11	+	5248	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	138.383123569635	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3574	False	NA	16	True	ATTAAA	-13	NA	59553321	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59631141_59631334_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.26	chr11	+	5316	26	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	178.961153326637	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3574	False	NA	16	True	ATTAAA	-13	NA	59553321	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59618733_59618802_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59631141_59631334_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.27	chr11	+	7949	25	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	134.867501851097	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3574	False	NA	16	True	ATTAAA	-13	NA	59553321	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59648349_59652154_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.28	chr11	+	5697	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_8	138.186047569612	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3574	False	NA	16	True	ATTAAA	-13	NA	59553321	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59631141_59631334_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59663044_59666341
ES.5010.3	chr11	+	4533	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-29	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.964549947511	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTGAACAGGACCTGAA	3544	False	NA	NA	False	NA	NA	NA	59553291	59667401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587035_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.30	chr11	+	4356	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.667008501968	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3577	False	NA	12	True	ATTAAA	-9	NA	59553324	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59622554_59622773_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.31	chr11	+	859	3	ISM	ENSMUSG00000005417.18	ENSMUST00000066330.15	7765	23	-8	78935	4	-30397	5prime_fragment	FALSE	canonical	3	400	junction_2	17.5	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	3577	False	NA	NA	False	NA	NA	NA	59553324	59588114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59553775_59586951_59587030_59587783
ES.5010.32	chr11	+	4169	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	107.690640735764	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3577	False	NA	16	True	ATTAAA	-13	NA	59553324	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645791_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.34	chr11	+	4269	25	NNC	ENSMUSG00000005417.18	novel	4021	24	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	159.309703399455	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3577	False	NA	17	True	ATTAAA	-14	NA	59553324	59667049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635256_59635497_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.35	chr11	+	4496	24	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-5	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	108.201188368988	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTCTCATTCCTTC	3580	False	NA	19	True	ATTAAA	-16	NA	59553327	59667051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.36	chr11	+	4355	20	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-3	2	intron_retention	FALSE	canonical	1	1	junction_8	114.78943748642	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTCTCATTCCTTC	3582	False	NA	19	True	ATTAAA	-16	NA	59553329	59667051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59663044_59666341
ES.5010.37	chr11	+	4115	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	105.419550670244	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3585	False	NA	12	True	ATTAAA	-9	NA	59553332	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662992_59663044_59666341
ES.5010.38	chr11	+	2591	7	NNC	ENSMUSG00000005417.18	novel	7765	23	NA	NA	0	-10748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	173.211495641087	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGCTGAGCAGGCTAA	3585	False	NA	NA	False	NA	NA	NA	59553332	59629643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59628110
ES.5010.39	chr11	+	5019	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	1	3	intron_retention	FALSE	canonical	3	400	junction_2	49.2546092150331	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCCTCTCATTCCTTCC	3586	False	NA	20	True	ATTAAA	-17	NA	59553333	59667052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.4	chr11	+	4087	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.351716018125	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3555	False	NA	16	True	ATTAAA	-13	NA	59553302	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553481_59553557_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.41	chr11	+	4120	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	107.964549947511	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3589	False	NA	12	True	ATTAAA	-9	NA	59553336	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587024_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.42	chr11	+	3590	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	4	-433	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	108.552735023083	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAGATTAGTCACGCG	3589	False	NA	NA	False	NA	NA	NA	59553336	59666616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.43	chr11	+	4060	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	110.127574406359	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3590	False	NA	16	True	ATTAAA	-13	NA	59553337	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.45	chr11	+	3890	23	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	144.08385414332	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3590	False	NA	16	True	ATTAAA	-13	NA	59553337	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643800_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.46	chr11	+	3995	24	NNC	ENSMUSG00000005417.18	novel	4021	24	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	138.54317637555	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCCCGGCCCCTCT	3591	False	NA	10	True	ATTAAA	-7	NA	59553338	59667042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666354
ES.5010.47	chr11	+	2696	16	NNC	ENSMUSG00000005417.18	novel	8718	23	NA	NA	6	7634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	118.676591345275	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTGTTGTACTTCTCA	3591	False	NA	NA	False	NA	NA	NA	59553338	59648025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59647802
ES.5010.48	chr11	+	7776	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	6	-5	intron_retention	FALSE	canonical	0	0	junction_7	110.631881585466	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3591	False	NA	12	True	ATTAAA	-9	NA	59553338	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977
ES.5010.49	chr11	+	5874	23	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	6	-1	intron_retention	FALSE	canonical	3	8	junction_7	105.896458474093	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3591	False	NA	16	True	ATTAAA	-13	NA	59553338	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59663044_59666341
ES.5010.50	chr11	+	1602	2	ISM	ENSMUSG00000005417.18	ENSMUST00000066330.15	7765	23	6	78932	6	-30394	intron_retention	FALSE	canonical	3	435	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	3591	False	NA	NA	False	NA	NA	NA	59553338	59588117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59553775_59586951
ES.5010.51	chr11	+	8075	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	14	-5	intron_retention	FALSE	canonical	2	8	junction_4	140.763097178949	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3599	False	NA	12	True	ATTAAA	-9	NA	59553346	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59618733_59618802_59622333_59622419_59626655_59626891_59627897_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.53	chr11	+	4183	25	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	15	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	137.916786253725	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3600	False	NA	12	True	ATTAAA	-9	NA	59553347	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59618733_59618802_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.54	chr11	+	8523	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	15	2	intron_retention	FALSE	canonical	2	5	junction_8	141.289778513123	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCCCTCTCATTCCTTC	3600	False	NA	19	True	ATTAAA	-16	NA	59553347	59667051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631002_59631141_59631334_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977
ES.5010.55	chr11	+	4866	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	142.926382626377	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3601	False	NA	12	True	ATTAAA	-9	NA	59553348	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59628110_59628409_59631334_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.56	chr11	+	1802	8	NNC	ENSMUSG00000005417.18	novel	8718	23	NA	NA	16	-8808	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	160.779732705897	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGAGGTGGTGGTTGTCC	3601	False	NA	NA	False	NA	NA	NA	59553348	59631583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631334
ES.5010.57	chr11	+	4125	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	108.636905863937	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3603	False	NA	16	True	ATTAAA	-13	NA	59553350	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622324_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.58	chr11	+	4101	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.635339788854	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	3605	False	NA	12	True	ATTAAA	-9	NA	59553352	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656242_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.59	chr11	+	3915	24	NNC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	132	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	106.958342154886	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3717	False	NA	16	True	ATTAAA	-13	NA	59553464	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643800_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.60	chr11	+	8280	23	ISM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	33663	0	-31511	0	3prime_fragment	FALSE	canonical	3	400	junction_1	48.5964364574568	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCATGCATATGGCTG	NA	False	NA	NA	False	AATAAA	-16	NA	59586995	59671680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.61	chr11	+	4882	4	NIC	ENSMUSG00000005417.18	novel	784	6	NA	NA	-3071	-779	intron_retention	FALSE	canonical	3	402	junction_1	31.0161248385416	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTCTATATCTTTTCC	NA	False	NA	NA	False	NA	NA	NA	59628603	59639612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59632088_59632816_59632925_59634596_59635647_59639372
ES.5010.62	chr11	+	3193	6	NIC	ENSMUSG00000005417.18	novel	4153	21	NA	NA	-779	3567	intron_retention	FALSE	canonical	3	402	junction_1	31.9023510105447	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGGATGTGGCCTGG	NA	False	NA	NA	False	AATAAA	-25	NA	59630895	59643958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59632088_59632816_59632925_59634596_59635647_59639372_59639463_59640344_59640455_59643315
ES.5010.63	chr11	+	3092	10	ISM	ENSMUSG00000005417.18	ENSMUST00000133861.8	4153	21	12510	10444	-658	-10065	internal_fragment	FALSE	canonical	3	402	junction_1	41.3837804453703	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTAGCCACGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	59631016	59656984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233
ES.5010.65	chr11	+	2774	16	ISM	ENSMUSG00000005417.18	ENSMUST00000133861.8	4153	21	14309	384	1141	-5	3prime_fragment	FALSE	canonical	3	417	junction_2	42.4591830140692	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCCGGCCCCTCTCA	NA	False	NA	12	True	ATTAAA	-9	NA	59632815	59667044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.66	chr11	+	2539	13	ISM	ENSMUSG00000005417.18	ENSMUST00000133861.8	4153	21	20864	386	7696	-7	3prime_fragment	FALSE	canonical	3	440	junction_2	37.9853773034952	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCCCGGCCCCTCT	5175	False	NA	10	True	ATTAAA	-7	NA	59639370	59667042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.67	chr11	+	5301	1	NIC	ENSMUSG00000005417.18	novel	8718	23	NA	NA	72	-10103	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	530	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59651645	59656946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59651600_59656900
ES.5010.68	chr11	+	1655	9	ISM	ENSMUSG00000005417.18	ENSMUST00000156111.2	2236	10	3626	7	3626	-7	3prime_fragment	FALSE	canonical	3	461	junction_1	38.2295697072306	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCCCGGCCCCTCT	NA	False	NA	10	True	ATTAAA	-7	NA	59655199	59667042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.7	chr11	+	8056	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-17	1	intron_retention	FALSE	canonical	3	400	junction_2	47.3215875117065	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCTCTCATTCCTT	3556	False	NA	18	True	ATTAAA	-15	NA	59553303	59667050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.8	chr11	+	4057	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	108.552735023083	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCCCCTCTCATTCCTT	3556	False	NA	18	True	ATTAAA	-15	NA	59553303	59667050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5010.9	chr11	+	4010	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	-16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	110.839732411224	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGCCCCTCTCATTCC	3557	False	NA	16	True	ATTAAA	-13	NA	59553304	59667048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ES.5011.1	chr11	+	846	2	FSM	ENSMUSG00000087249.2	ENSMUST00000151825.2	771	2	-206	131	-206	-131	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTGTAATGTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	59700699	59709186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59701088_59708728
ES.5012.1	chr11	+	3016	1	Antisense	novelGene_ENSMUSG00000019373.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCACTTAATGGCATTAT	NA	False	NA	NA	False	NA	NA	NA	59725746	59728762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59725700_59728800
ES.5012.2	chr11	+	2812	1	Antisense	novelGene_ENSMUSG00000019373.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	59725746	59728558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59725700_59728600
ES.5013.1	chr11	-	3024	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-23	-2053	-20	1247	multi-exon	FALSE	canonical	3	85	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGACATGCCTAAAAT	NA	False	NA	NA	False	AAAAAG	-23	NA	59678491	59673475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59676052_59678043
ES.5013.10	chr11	-	3506	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	59700835	59682278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
ES.5013.12	chr11	-	3263	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-98	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	95.4969561769026	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	59700635	59682281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700525
ES.5013.13	chr11	-	3305	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	95.6498792904833	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	59700649	59682282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700201_59700312_59700485
ES.5013.14	chr11	-	3352	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-251	336	-251	46	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATGTTTTTATGTTAA	NA	False	NA	1	True	AATAAA	-23	NA	59701093	59682569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.15	chr11	-	3083	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-23	45	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	74.517848346703	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACATGTTTTTATGTTA	NA	False	NA	0	True	AATAAA	-22	NA	59700865	59682570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700525
ES.5013.16	chr11	-	3413	13	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-2	45	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	67.9384934252217	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACATGTTTTTATGTTA	NA	False	NA	0	True	AATAAA	-22	NA	59700844	59682570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.17	chr11	-	3412	15	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-70	44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	121.936668071619	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTACATGTTTTTATGTT	NA	False	NA	-1	True	AATAAA	-21	NA	59700607	59682571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688435_59688552_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
ES.5013.18	chr11	-	5568	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-98	44	intron_retention	FALSE	canonical	3	222	junction_10	20.259318843436	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTACATGTTTTTATGTT	NA	False	NA	-1	True	AATAAA	-21	NA	59700635	59682571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.2	chr11	-	2357	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-73	-1336	-70	530	multi-exon	FALSE	canonical	3	85	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTCAATGCTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	59678541	59674192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59676052_59678043
ES.5013.20	chr11	-	3066	13	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-2	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.3680774011686	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700844	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683607_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.21	chr11	-	3748	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-92	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	116.328803537836	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700629	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695342_59695618_59698625_59698742_59699409_59700312_59700525
ES.5013.22	chr11	-	6243	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	101	40	intron_retention	FALSE	canonical	3	256	junction_3	18.3346666181853	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700649	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625
ES.5013.23	chr11	-	3997	12	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-99	40	intron_retention	FALSE	canonical	3	222	junction_11	23.8840172707971	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700636	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.24	chr11	-	3002	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	103	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.1070517035261	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700647	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686299_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.25	chr11	-	5314	10	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	103	40	intron_retention	FALSE	canonical	3	222	junction_9	24.2624538467705	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700647	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59686091_59686575_59686690_59688880_59689072_59690179_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.26	chr11	-	3295	14	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-84	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.477257811807	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700621	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700201_59700312_59700485
ES.5013.28	chr11	-	3234	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-18	40	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	92.1306635794925	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700860	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
ES.5013.3	chr11	-	1766	2	NNC	ENSMUSG00000043648.8	novel	948	2	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCATGTCTACCTT	NA	False	NA	-14	True	AATAAA	-15	NA	59678489	59674723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59676044_59678043
ES.5013.30	chr11	-	3847	14	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-80	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.879509814187	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700617	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686206_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59699409_59700312_59700525
ES.5013.32	chr11	-	2990	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-90	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	95.6498792904833	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700627	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700201_59700312_59700485
ES.5013.35	chr11	-	4020	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-23	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	95.6498792904833	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700865	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59699409_59700312_59700485
ES.5013.36	chr11	-	3909	13	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-84	40	intron_retention	FALSE	canonical	0	0	junction_11	98.7465892519275	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCGACTACATGTTTTTA	NA	False	NA	-5	True	AATAAA	-17	NA	59700621	59682575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700201_59700312_59700485
ES.5013.37	chr11	-	5206	9	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	5043	37	intron_retention	FALSE	canonical	3	36	junction_4	81.8852092871478	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59695371	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59693177_59694574_59694722_59695346
ES.5013.38	chr11	-	2751	12	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-96	37	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	79.2583389778051	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700633	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.39	chr11	-	4791	12	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-96	37	intron_retention	FALSE	canonical	3	36	junction_4	70.9268043143629	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700633	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.40	chr11	-	5885	12	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-90	37	intron_retention	FALSE	canonical	3	222	junction_11	23.7841533465714	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700627	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59698742_59700485
ES.5013.41	chr11	-	3053	14	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-98	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.1070517035261	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700635	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686050_59686192_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.42	chr11	-	5405	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-96	37	intron_retention	FALSE	canonical	3	222	junction_10	24.6213322141593	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700633	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.45	chr11	-	2960	14	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-92	37	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	95.4969561769026	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700629	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700525
ES.5013.46	chr11	-	3329	14	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	103	37	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	104.633086737593	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700647	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
ES.5013.47	chr11	-	3882	13	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-20	37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	115.336795468267	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700862	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59699409_59700312_59700485
ES.5013.48	chr11	-	4544	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-96	37	intron_retention	FALSE	canonical	3	222	junction_10	24.6213322141593	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700633	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.49	chr11	-	3637	12	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	103	37	intron_retention	FALSE	canonical	0	0	junction_9	81.8828027636436	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700647	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695342_59695618_59698625_59698742_59700485
ES.5013.5	chr11	-	5328	13	Fusion	ENSMUSG00000043648.8_ENSMUSG00000032633.13	novel	842	4	NA	NA	-84	-1	intron_retention	FALSE	canonical	0	0	junction_2	103.51606826425	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCATGTCTACCTT	NA	False	NA	-14	True	AATAAA	-15	NA	59700621	59674723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_59676052_59678043_59678324_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.51	chr11	-	4611	12	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	-203	-37	-80	37	intron_retention	FALSE	canonical	3	256	junction_3	18.4758050406694	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700617	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625
ES.5013.53	chr11	-	2921	14	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-65	37	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	91.9737549392931	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700602	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686332_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.54	chr11	-	3477	13	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-84	37	intron_retention	FALSE	canonical	3	19	junction_11	94.4213370424762	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700621	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
ES.5013.57	chr11	-	3401	6	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	9664	37	intron_retention	FALSE	canonical	0	0	junction_1	142.30052705454	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59690750	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59684047_59684911_59685018_59685098_59686050_59686575_59686690_59688880_59689072_59690179
ES.5013.58	chr11	-	3804	12	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-92	37	intron_retention	FALSE	canonical	3	222	junction_11	23.8840172707971	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700629	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.59	chr11	-	3138	13	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-71	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.4307465951026	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCGACTACATGTTT	NA	False	NA	-8	True	AATAAA	-14	NA	59700608	59682578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683607_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.60	chr11	-	4294	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-98	36	intron_retention	FALSE	canonical	3	222	junction_10	23.9543315498471	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700635	59682579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686690_59688880_59689072_59690179_59690272_59691868_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.61	chr11	-	3701	11	NIC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-98	36	intron_retention	FALSE	canonical	3	222	junction_10	23.4531447784727	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCCGACTACATGTT	NA	False	NA	-9	True	AATAAA	-13	NA	59700635	59682579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59683638_59684911_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.62	chr11	-	3051	13	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	-2	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.4185952397025	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTGCCGACTACATGT	NA	False	NA	-10	True	AATAAA	-12	NA	59700844	59682580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686050_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5013.63	chr11	-	3023	13	FSM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	-220	-35	-97	35	multi-exon	FALSE	canonical	0	0	junction_12	78.0128194593683	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTGCCGACTACATGT	NA	False	NA	-10	True	AATAAA	-12	NA	59700634	59682580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700344
ES.5013.65	chr11	-	5687	13	NNC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	-92	35	intron_retention	FALSE	non_canonical	0	0	junction_11	111.190620857457	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTGCCGACTACATGT	NA	False	NA	-10	True	AATAAA	-12	NA	59700629	59682580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59699409_59700312_59700485
ES.5013.8	chr11	-	1503	2	FSM	ENSMUSG00000043648.8	ENSMUST00000125307.2	948	2	-33	-522	-30	-284	multi-exon	FALSE	canonical	3	85	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCTGTTTTCGCACTT	NA	False	NA	NA	False	NA	NA	NA	59678501	59675006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59676052_59678043
ES.5013.9	chr11	-	3459	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	-18	-4	-18	4	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTTGGTACCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	59700860	59682229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ES.5014.1	chr11	-	1668	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	-18	-4	-18	4	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTTCTCTCACTTT	NA	False	NA	0	True	ATTAAA	-31	NA	59730682	59708616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.10	chr11	-	3461	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	617	junction_6	44.1039680754465	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTAATGTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-23	NA	59730642	59708624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.11	chr11	-	6182	11	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	4	-9	intron_retention	FALSE	canonical	3	8	junction_4	202.299307957294	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGAATGTTAATGTGT	NA	False	NA	-13	True	ATTAAA	-18	NA	59730660	59708629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59714921_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.12	chr11	-	3495	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	25	-9	intron_retention	FALSE	canonical	3	15	junction_7	200.882154508558	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGAATGTTAATGTGT	NA	False	NA	-13	True	ATTAAA	-18	NA	59730613	59708629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.13	chr11	-	5037	11	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	-4	-9	intron_retention	FALSE	canonical	0	0	junction_3	271.099170046682	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGAATGTTAATGTGT	NA	False	NA	-13	True	ATTAAA	-18	NA	59730642	59708629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59710945_59712125_59712213_59714574_59714651_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.14	chr11	-	4044	7	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	5283	-9	intron_retention	FALSE	non_canonical	0	0	junction_3	322.859317488111	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGAATGTTAATGTGT	NA	False	NA	-13	True	ATTAAA	-18	NA	59718836	59708629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59709326_59710830_59710945_59712125_59713798_59713838_59714921_59715100_59715275_59717115_59717257_59718671
ES.5014.15	chr11	-	3548	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	4	-11	intron_retention	FALSE	canonical	0	0	junction_4	260.334051137799	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59730660	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59714574_59714651_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.16	chr11	-	3627	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	4	-11	intron_retention	FALSE	canonical	0	0	junction_4	299.836759995548	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59730660	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59710945_59712125_59712213_59715100_59715275_59716201_59716625_59717115_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.17	chr11	-	1565	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	26	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.081278475522	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59730612	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717133_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.18	chr11	-	1634	13	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	-6620	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	247.840618588282	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59737284	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730693_59730799_59737221
ES.5014.19	chr11	-	4478	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	4	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	195.134028954968	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59730660	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59713798_59713838_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.2	chr11	-	1684	12	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	191.53818426898	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATGTGTGTTCTCT	NA	False	NA	-6	True	ATTAAA	-25	NA	59730636	59708622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.20	chr11	-	3204	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	4	-11	intron_retention	FALSE	canonical	3	15	junction_7	200.466181686588	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTGAATGTTAATGT	NA	False	NA	-15	True	ATTAAA	-16	NA	59730660	59708631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.22	chr11	-	1571	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	29	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	196.081278475522	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCCTTGAATGTTAATG	NA	False	NA	-16	True	ATTAAA	-15	NA	59730609	59708632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715267_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.3	chr11	-	3480	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	27	-2	intron_retention	FALSE	canonical	1	3	junction_4	258.243014514342	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATGTGTGTTCTCT	NA	False	NA	-6	True	ATTAAA	-25	NA	59730611	59708622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59714872_59714921_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.4	chr11	-	1578	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	195.00341170993	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATGTGTGTTCTCT	NA	False	NA	-6	True	ATTAAA	-25	NA	59730570	59708622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727688_59727847_59730495
ES.5014.5	chr11	-	1536	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	205.229627490769	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATGTGTGTTCTCT	NA	False	NA	-6	True	ATTAAA	-25	NA	59730649	59708622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.6	chr11	-	3585	12	NNC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	-12	-4	intron_retention	FALSE	canonical	1	3	junction_4	296.997537346832	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTAATGTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-23	NA	59730650	59708624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59714872_59714921_59715100_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5014.7	chr11	-	1461	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	25	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_10	200.901991030452	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTAATGTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-23	NA	59730613	59708624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59730495
ES.5014.9	chr11	-	4937	10	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	25	-4	intron_retention	FALSE	canonical	3	617	junction_5	45.7694167121763	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTAATGTGTGTTCT	NA	False	NA	-8	True	ATTAAA	-23	NA	59730613	59708624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_59708935_59709244_59710945_59712125_59712213_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ES.5015.1	chr11	+	1345	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	-40	1	-40	-1	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGCTGTGGCCTTCT	1679	False	NA	5	True	AATAAA	-15	NA	59738858	59767358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ES.5015.3	chr11	+	1236	4	NIC	ENSMUSG00000032615.15	novel	1306	5	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	26.0426999794995	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTGTGCTGTGGCCTT	1725	False	NA	3	True	AATAAA	-13	NA	59738904	59767356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59739199_59743616_59743718_59765378_59765494_59766630
ES.5015.4	chr11	+	1249	6	NNC	ENSMUSG00000032615.15	novel	1387	5	NA	NA	216	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	29.3434830925028	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATAGCCTGTGCTGTGGCC	1966	False	NA	1	True	AATAAA	-11	NA	59739145	59767354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_59739311_59743616_59743718_59751575_59751637_59765107_59765191_59765378_59765494_59766630
ES.5016.1	chr11	-	2154	1	Antisense	novelGene_ENSMUSG00000032615.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCATTGGAGGAGTCGA	NA	False	NA	NA	False	NA	NA	NA	59741450	59739296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_59739300_59741400
ES.5017.1	chr11	-	181	1	Intergenic	novelGene_3947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59792484	59792303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59792300_59792500
ES.5018.1	chr11	+	3006	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	10	-1096	10	1096	multi-exon	FALSE	canonical	3	425	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTTCTTTTGGG	NA	False	NA	NA	False	ATTAAA	-13	NA	59839041	59854127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59839305_59851384
ES.5018.2	chr11	+	828	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	12	1080	12	-1080	multi-exon	FALSE	canonical	3	425	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGTTTTGAAAGGCCA	NA	False	NA	13	True	ATTAAA	-19	NA	59839043	59851951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59839305_59851384
ES.5018.3	chr11	+	1909	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	12	-1	12	1	multi-exon	FALSE	canonical	3	425	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGTTTGCCTGTTGGCT	NA	False	NA	11	True	ATTAAA	-22	NA	59839043	59853032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59839305_59851384
ES.5018.4	chr11	+	1732	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	47	141	47	-141	multi-exon	FALSE	canonical	3	425	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCGCAGAGCACATGAA	NA	False	NA	NA	False	NA	NA	NA	59839078	59852890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59839305_59851384
ES.5019.1	chr11	-	2031	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	-424	4	-424	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTGCTTTGCTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	59856194	59854010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59855193_59855345
ES.5019.2	chr11	-	1601	2	NNC	ENSMUSG00000049892.8	novel	1611	2	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTGCTTTGCTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	59855770	59854010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59855193_59855351
ES.502.1	chr1	+	3005	7	NNC	ENSMUSG00000087022.5	novel	2628	5	NA	NA	-99785	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACGTGGGCAGGGGCCG	NA	False	NA	NA	False	NA	NA	NA	56910785	57012359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_56910946_56930324_56930425_56937104_56937229_56938149_56938276_56987236_56987413_57008809_57009038_57010268
ES.502.2	chr1	+	3148	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56916778	56919926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_56916800_56919900
ES.5020.1	chr11	+	165	1	Intergenic	novelGene_3948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAATCGATTTA	NA	False	NA	NA	False	NA	NA	NA	59877758	59877923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59877800_59877900
ES.5021.1	chr11	+	2253	2	Antisense	novelGene_ENSMUSG00000000301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTCTCCTCTTTCT	4877	False	NA	NA	False	NA	NA	NA	59892094	59896787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59893690_59896129
ES.5021.2	chr11	+	2535	2	Antisense	novelGene_ENSMUSG00000000301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATGTTTCAGGCTTT	5484	False	NA	NA	False	ATTAAA	-18	NA	59892701	59897309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59893690_59895762
ES.5021.3	chr11	+	1044	2	Antisense	novelGene_ENSMUSG00000000301.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCACCACCTGTTTGTT	6319	False	NA	NA	False	NA	NA	NA	59893536	59896653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_59893690_59895762
ES.5021.4	chr11	+	2934	1	Intergenic	novelGene_3950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATCTGTCTCCTCTTTC	6635	False	NA	NA	False	NA	NA	NA	59893852	59896786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59893900_59896800
ES.5022.1	chr11	+	175	1	Intergenic	novelGene_3951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGACATCCAGTC	NA	False	NA	NA	False	NA	NA	NA	59912373	59912548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59912400_59912500
ES.5023.1	chr11	-	988	7	FSM	ENSMUSG00000000301.17	ENSMUST00000000310.14	953	7	-39	4	-27	-4	multi-exon	FALSE	canonical	0	0	junction_6	14.4846662217517	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTCTCTGGTCTCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	59937342	59861443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937169
ES.5023.3	chr11	-	932	6	NNC	ENSMUSG00000000301.17	novel	961	7	NA	NA	-79	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	15.663971399361	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTCTCTGGTCTCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	59937394	59861443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874381_59937165
ES.5023.4	chr11	-	744	3	FSM	ENSMUSG00000000301.17	ENSMUST00000150954.8	424	3	-326	6	-326	-6	multi-exon	FALSE	canonical	0	0	junction_2	19.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTCTCTGGTCTCC	NA	False	NA	-5	True	AATAAA	-13	NA	59862662	59861445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_59861702_59862009_59862085_59862249
ES.5023.5	chr11	-	156	1	Intergenic	novelGene_3949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	59883274	59883118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59883100_59883300
ES.5024.1	chr11	+	178	1	Intergenic	novelGene_3952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAGGAAAGAAAGAAAG	292	False	NA	NA	False	NA	NA	NA	59948527	59948705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59948500_59948700
ES.5025.1	chr11	+	181	1	Intergenic	novelGene_3953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	59969373	59969554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_59969400_59969600
ES.5026.1	chr11	-	135	1	Intergenic	novelGene_3954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	4740	False	NA	NA	False	NA	NA	NA	59972203	59972068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_59972100_59972200
ES.5027.1	chr11	+	1916	5	FSM	ENSMUSG00000062115.16	ENSMUST00000149770.8	1823	5	-94	1	-94	1	multi-exon	FALSE	canonical	1	6	junction_2	6.75925291729789	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCGGCCTGTGGATGC	NA	False	NA	NA	False	AATAAA	-21	NA	59995744	60090022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59996221_60031066_60031197_60084764_60084859_60088614_60088665_60088856
ES.5027.10	chr11	+	2956	3	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	16413	2	16413	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	8684	False	NA	NA	False	AATAAA	-20	NA	60083117	60090021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60084859_60088614_60088665_60088856
ES.5027.11	chr11	+	4378	2	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	18746	3	18746	-1	3prime_fragment	FALSE	canonical	3	20	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGCGGCCTGTGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	60085450	60090020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60088665_60088856
ES.5027.2	chr11	+	7445	6	FSM	ENSMUSG00000062115.16	ENSMUST00000064190.13	7348	6	-93	-4	-93	2	multi-exon	FALSE	canonical	2	7	junction_1	5.67097875150313	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGGCCTGTGGATGCCGA	NA	False	NA	NA	False	AATAAA	-24	NA	59995745	60090025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_59996221_60031066_60031197_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ES.5027.3	chr11	+	7284	5	NIC	ENSMUSG00000062115.16	novel	7348	6	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.24621125123532	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	False	NA	NA	False	AATAAA	-20	NA	59995772	60090021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_59996221_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ES.5027.4	chr11	+	7157	2	FSM	ENSMUSG00000062115.16	ENSMUST00000090806.5	7217	2	76	-16	76	16	multi-exon	FALSE	canonical	3	8	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATGGAACCTCTGTCC	NA	False	NA	NA	False	TATAAA	-14	NA	60030985	60082867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60031197_60075921
ES.5027.5	chr11	+	6974	5	FSM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	-53	0	-53	0	multi-exon	FALSE	canonical	3	11	junction_1	3.69966214673719	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	NA	False	NA	NA	False	AATAAA	-22	NA	60066651	60090023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60066788_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ES.5027.6	chr11	+	7080	2	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	-51	7156	-51	16	5prime_fragment	FALSE	canonical	3	11	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATGGAACCTCTGTCC	NA	False	NA	NA	False	TATAAA	-14	NA	60066653	60082867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60066788_60075921
ES.5027.7	chr11	+	1387	4	NIC	ENSMUSG00000062115.16	novel	6921	5	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.9566858950296	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	False	NA	NA	False	AATAAA	-20	NA	60066709	60090021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60066788_60084764_60084859_60088614_60088665_60088856
ES.5027.8	chr11	+	6838	4	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	9215	2	9215	0	3prime_fragment	FALSE	canonical	3	16	junction_1	1.88561808316413	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	1486	False	NA	NA	False	AATAAA	-20	NA	60075919	60090021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60081449_60084764_60084859_60088614_60088665_60088856
ES.5027.9	chr11	+	4564	3	ISM	ENSMUSG00000062115.16	ENSMUST00000149770.8	1823	5	85178	495	14312	-493	3prime_fragment	FALSE	canonical	3	20	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATGCTCGCTTCTGTGT	6583	False	NA	NA	False	NA	NA	NA	60081016	60089528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60084859_60088614_60088665_60088856
ES.5028.1	chr11	-	5337	1	Antisense	novelGene_ENSMUSG00000062115.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCGGCAGAAGGCATCA	NA	False	NA	NA	False	NA	NA	NA	60077331	60071994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60072000_60077300
ES.5029.1	chr11	-	4281	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	6	10	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	5249	False	NA	NA	False	AATAAA	-31	NA	60101285	60089904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.10	chr11	-	4063	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-180	-496	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_19	106.204970904734	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGGGTAGGCAGATGT	1644	False	NA	8	True	ATTAAA	-31	NA	60113587	60090410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278_60111452_60113348
ES.5029.11	chr11	-	3808	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-32	-501	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTATCTGGGTAGGCA	5211	False	NA	3	True	ATTAAA	-26	NA	60101323	60090415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.12	chr11	-	3676	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-30	-504	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_14	107.595550415135	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTATCTGGGTAG	5286	False	NA	0	True	ATTAAA	-23	NA	60101248	60090418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096006_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.13	chr11	-	4193	13	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-30	-504	intron_retention	FALSE	canonical	0	0	junction_11	130.522321420088	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTATCTGGGTAG	5286	False	NA	0	True	ATTAAA	-23	NA	60101248	60090418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097663_60098084_60101161
ES.5029.14	chr11	-	3904	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-186	-504	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	130.73289374206	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTATCTGGGTAG	1638	False	NA	0	True	ATTAAA	-23	NA	60113593	60090418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092748_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
ES.5029.15	chr11	-	3805	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	intron_retention	FALSE	canonical	3	238	junction_17	63.3457038850469	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	-4	True	ATTAAA	-19	NA	60101247	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.16	chr11	-	3919	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-23	-508	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	132.245574469466	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5293	False	NA	-4	True	ATTAAA	-19	NA	60101241	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60098216_60098417_60101161
ES.5029.17	chr11	-	4411	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-508	intron_retention	FALSE	canonical	3	238	junction_17	63.8028971801541	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3803	False	NA	-4	True	ATTAAA	-19	NA	60111428	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.18	chr11	-	3620	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	23	-508	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5266	False	NA	-4	True	ATTAAA	-19	NA	60101268	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60101161
ES.5029.19	chr11	-	3777	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-508	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.584343749743	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3809	False	NA	-4	True	ATTAAA	-19	NA	60111422	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097226_60097400_60097663_60098084_60111278
ES.5029.2	chr11	-	4328	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	-19	-10	-19	10	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTGTGAAGCAATAT	3782	False	NA	NA	False	AATAAA	-31	NA	60111449	60089904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.20	chr11	-	3896	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-21	-508	intron_retention	FALSE	canonical	3	238	junction_17	63.5556590659554	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3780	False	NA	-4	True	ATTAAA	-19	NA	60111451	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097400_60097663_60098084_60111278
ES.5029.21	chr11	-	4023	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-325	-508	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	1499	False	NA	-4	True	ATTAAA	-19	NA	60113732	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
ES.5029.22	chr11	-	4778	15	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	intron_retention	FALSE	canonical	3	238	junction_14	67.8356356894203	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	-4	True	ATTAAA	-19	NA	60101247	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096904_60096998_60098084_60101161
ES.5029.23	chr11	-	4333	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-30	-508	intron_retention	FALSE	canonical	0	0	junction_14	111.365603207879	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5286	False	NA	-4	True	ATTAAA	-19	NA	60101248	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.24	chr11	-	3710	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5287	False	NA	-4	True	ATTAAA	-19	NA	60101247	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.25	chr11	-	3802	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-23	-508	intron_retention	FALSE	canonical	3	238	junction_17	64.4289259974921	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5293	False	NA	-4	True	ATTAAA	-19	NA	60101241	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.26	chr11	-	3677	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-12	-508	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3789	False	NA	-4	True	ATTAAA	-19	NA	60111442	60090422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60111278
ES.5029.27	chr11	-	3677	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-24	-509	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	137.638471240537	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	5292	False	NA	-5	True	ATTAAA	-18	NA	60101242	60090423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096033_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.28	chr11	-	3963	17	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-509	intron_retention	FALSE	canonical	3	238	junction_16	61.1632038075181	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	3803	False	NA	-5	True	ATTAAA	-18	NA	60111428	60090423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.29	chr11	-	4617	13	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	7	-509	intron_retention	FALSE	canonical	3	238	junction_12	66.7418326255897	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCAGTTTTGTTTATCTG	3808	False	NA	-5	True	ATTAAA	-18	NA	60111423	60090423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094896_60095428_60095947_60096060_60096681_60098084_60111278
ES.5029.3	chr11	-	4157	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGATACACACAATCTTC	3812	False	NA	NA	False	AATAAA	-16	NA	60111419	60089919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60111278
ES.5029.30	chr11	-	3987	17	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-510	intron_retention	FALSE	canonical	0	0	junction_5	113.911081001806	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5287	False	NA	-6	True	ATTAAA	-17	NA	60101247	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092539_60092621_60092748_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.31	chr11	-	4571	14	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-2	-510	intron_retention	FALSE	canonical	3	238	junction_13	70.7634613032835	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5314	False	NA	-6	True	ATTAAA	-17	NA	60101220	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60095428_60095947_60096060_60096681_60096904_60096998_60097400_60097663_60098084_60101161
ES.5029.32	chr11	-	3793	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-19	-510	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3782	False	NA	-6	True	ATTAAA	-17	NA	60111449	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.34	chr11	-	4741	14	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-23	-510	intron_retention	FALSE	canonical	0	0	junction_10	124.204879417058	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5293	False	NA	-6	True	ATTAAA	-17	NA	60101241	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092732_60092984_60094092_60094171_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.35	chr11	-	3823	17	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-186	-510	intron_retention	FALSE	canonical	0	0	junction_15	138.863903134508	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	1638	False	NA	-6	True	ATTAAA	-17	NA	60113593	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097663_60098084_60113348
ES.5029.36	chr11	-	3346	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-510	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	139.323799500539	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3809	False	NA	-6	True	ATTAAA	-17	NA	60111422	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60111278
ES.5029.37	chr11	-	3946	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	11	-510	intron_retention	FALSE	canonical	3	238	junction_17	64.74790079562	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3812	False	NA	-6	True	ATTAAA	-17	NA	60111419	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.38	chr11	-	3574	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-21	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	133.449088718426	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5295	False	NA	-6	True	ATTAAA	-17	NA	60101239	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60101161
ES.5029.39	chr11	-	3676	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-510	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	106.910254274956	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5287	False	NA	-6	True	ATTAAA	-17	NA	60101247	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091615_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.4	chr11	-	4343	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-24	-5	intron_retention	FALSE	canonical	3	238	junction_17	64.6865211675604	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGATACACACAATCTTC	5292	False	NA	NA	False	AATAAA	-16	NA	60101242	60089919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.40	chr11	-	3500	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-28	-510	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	111.365603207879	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5288	False	NA	-6	True	ATTAAA	-17	NA	60101246	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.41	chr11	-	4865	16	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-510	intron_retention	FALSE	canonical	0	0	junction_3	118.161960414039	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3803	False	NA	-6	True	ATTAAA	-17	NA	60111428	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091697_60092071_60092539_60092621_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.42	chr11	-	3753	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-74	-510	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	129.132241529639	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	1750	False	NA	-6	True	ATTAAA	-17	NA	60113481	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092422_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
ES.5029.43	chr11	-	3640	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	133.449088718426	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3809	False	NA	-6	True	ATTAAA	-17	NA	60111422	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60111278
ES.5029.44	chr11	-	3826	16	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	10	-510	intron_retention	FALSE	canonical	0	0	junction_14	117.80371622133	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5253	False	NA	-6	True	ATTAAA	-17	NA	60101281	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097663_60098084_60101161
ES.5029.45	chr11	-	3802	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	109.822991701068	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3809	False	NA	-6	True	ATTAAA	-17	NA	60111422	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095449_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.47	chr11	-	3700	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-23	-510	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	107.766107615601	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5293	False	NA	-6	True	ATTAAA	-17	NA	60101241	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092422_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.48	chr11	-	3590	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-510	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	111.401701514591	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5287	False	NA	-6	True	ATTAAA	-17	NA	60101247	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.49	chr11	-	3762	15	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	230	-510	intron_retention	FALSE	non_canonical	0	0	junction_8	116.19678944597	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	8750	False	NA	-6	True	ATTAAA	-17	NA	60097784	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094911_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
ES.5029.5	chr11	-	4222	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.584343749743	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGATACACACAATCTTC	5287	False	NA	NA	False	AATAAA	-16	NA	60101247	60089919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097226_60097400_60097663_60098084_60101161
ES.5029.50	chr11	-	4076	16	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-510	intron_retention	FALSE	canonical	3	238	junction_15	62.8372147342286	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3809	False	NA	-6	True	ATTAAA	-17	NA	60111422	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.51	chr11	-	4317	15	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	31	-510	intron_retention	FALSE	canonical	3	238	junction_14	69.1137778284061	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3832	False	NA	-6	True	ATTAAA	-17	NA	60111399	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.52	chr11	-	4786	14	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-510	intron_retention	FALSE	canonical	3	238	junction_13	69.0134194994417	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3803	False	NA	-6	True	ATTAAA	-17	NA	60111428	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092732_60092984_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.53	chr11	-	4614	14	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	11	-510	intron_retention	FALSE	canonical	3	238	junction_13	65.892237647909	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3812	False	NA	-6	True	ATTAAA	-17	NA	60111419	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.55	chr11	-	3998	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-182	-510	intron_retention	FALSE	canonical	3	37	junction_17	100.472482417742	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	1642	False	NA	-6	True	ATTAAA	-17	NA	60113589	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
ES.5029.56	chr11	-	3932	17	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	2	-510	intron_retention	FALSE	canonical	0	0	junction_13	134.150087937914	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3803	False	NA	-6	True	ATTAAA	-17	NA	60111428	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091662_60092071_60092238_60092422_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.57	chr11	-	3861	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-510	intron_retention	FALSE	canonical	3	238	junction_17	63.3457038850469	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3809	False	NA	-6	True	ATTAAA	-17	NA	60111422	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.58	chr11	-	4871	13	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	11	-510	intron_retention	FALSE	canonical	3	238	junction_12	68.8744328470297	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3812	False	NA	-6	True	ATTAAA	-17	NA	60111419	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60097400_60097663_60098084_60111278
ES.5029.59	chr11	-	5259	11	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	7	-510	intron_retention	FALSE	canonical	3	238	junction_10	74.3860874088697	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3808	False	NA	-6	True	ATTAAA	-17	NA	60111423	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095428_60095947_60096060_60096681_60098084_60111278
ES.5029.6	chr11	-	4176	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	7	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGATACACACAATCTT	5323	False	NA	NA	False	AATAAA	-15	NA	60101211	60089920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.60	chr11	-	6390	8	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-510	intron_retention	FALSE	canonical	0	0	junction_5	141.391481428013	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	3801	False	NA	-6	True	ATTAAA	-17	NA	60111430	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60094804_60094896_60095093_60095212_60095428_60095947_60096849_60096998_60097400_60097663_60098084_60111278
ES.5029.61	chr11	-	2574	14	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-30	-510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	126.814312372402	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGTTTTGTTTATCT	5286	False	NA	-6	True	ATTAAA	-17	NA	60101248	60090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60094920_60097774_60098084_60101161
ES.5029.66	chr11	-	3764	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	9	-511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	109.584343749743	639	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGTTTTGTTTATC	3810	False	NA	-7	True	ATTAAA	-16	NA	60111421	60090425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097235_60097400_60097663_60098084_60111278
ES.5029.67	chr11	-	4045	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-180	-511	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	134.41734322871	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGTTTTGTTTATC	1644	False	NA	-7	True	ATTAAA	-16	NA	60113587	60090425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092721_60092976_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278_60111452_60113348
ES.5029.68	chr11	-	4979	11	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	20	-511	intron_retention	FALSE	canonical	3	238	junction_10	74.4731495238385	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGTTTTGTTTATC	5336	False	NA	-7	True	ATTAAA	-16	NA	60101198	60090425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60095428_60095947_60096060_60096681_60097400_60097663_60098084_60101161
ES.5029.69	chr11	-	3828	19	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-187	-511	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_14	129.321364948328	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGTTTTGTTTATC	1637	False	NA	-7	True	ATTAAA	-16	NA	60113594	60090425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096006_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
ES.5029.7	chr11	-	4270	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	8	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGATACACACAATCTT	3809	False	NA	NA	False	AATAAA	-15	NA	60111422	60089920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.70	chr11	-	4160	16	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	18	-512	intron_retention	FALSE	canonical	3	238	junction_15	66.9754183761973	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTCAGTTTTGTTTAT	3819	False	NA	-8	True	ATTAAA	-15	NA	60111412	60090426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094896_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.71	chr11	-	3643	18	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	19	-513	intron_retention	FALSE	canonical	0	0	junction_14	139.015918532866	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCAGTTTTGTTTA	5335	False	NA	-9	True	ATTAAA	-14	NA	60101199	60090427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096006_60096681_60096849_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ES.5029.72	chr11	-	3763	16	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	20	-513	intron_retention	FALSE	canonical	0	0	junction_14	118.341990293668	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCAGTTTTGTTTA	5336	False	NA	-9	True	ATTAAA	-14	NA	60101198	60090427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097663_60098084_60101161
ES.5029.73	chr11	-	4949	10	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-15	-515	intron_retention	FALSE	canonical	0	0	junction_8	135.052893159004	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAACTTCAGTTTTGTT	3786	False	NA	-11	True	ATTAAA	-12	NA	60111445	60090429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60092539_60092621_60092732_60092984_60093088_60093587_60094804_60094896_60095428_60095947_60096060_60096681_60097137_60097663_60098084_60111278
ES.5029.74	chr11	-	3891	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-42	-515	intron_retention	FALSE	canonical	0	0	junction_14	110.118903964672	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAACTTCAGTTTTGTT	3759	False	NA	-11	True	ATTAAA	-12	NA	60111472	60090429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
ES.5029.75	chr11	-	3531	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	19	512	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_18	106.022863786211	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAATTATTTATA	5335	False	NA	-25	True	NA	NA	NA	60101199	60090443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097857_60097981_60098084_60101161
ES.5029.76	chr11	-	7295	18	ISM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	9669	530	-470	511	3prime_fragment	FALSE	canonical	3	300	junction_15	52.3111531836648	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATGAAATTATTTAT	4773	False	NA	-26	True	NA	NA	NA	60101761	60090444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663
ES.5029.77	chr11	-	162	1	Intergenic	novelGene_3955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1638	False	NA	NA	False	NA	NA	NA	60113593	60113431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60113400_60113600
ES.5029.8	chr11	-	4049	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	19	-10	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCTCGATACACACAA	5335	False	NA	NA	False	AATAAA	-11	NA	60101199	60089924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60101161
ES.503.1	chr1	-	6265	11	FSM	ENSMUSG00000038331.16	ENSMUST00000114415.10	5805	11	-455	-5	189	0	multi-exon	FALSE	canonical	0	0	junction_10	2.65518360947035	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTGTCAAATAGTTT	NA	False	NA	-24	True	AATAAA	-20	NA	57011472	56833139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_56836404_56870597_56870796_56884734_56884891_56889329_56889543_56910470_56910944_56930321_56930425_56937104_56937229_56938149_56938277_56987237_56987415_57008811_57009040_57010270
ES.503.2	chr1	-	5021	10	NIC	ENSMUSG00000038331.16	novel	5805	11	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	2.79329001999479	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCTGACTTTGTTTG	NA	False	NA	-35	True	AATAAA	-9	NA	57008987	56833150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_56836404_56870597_56870796_56884734_56884891_56889329_56889543_56910470_56910944_56930321_56930425_56937104_56937229_56938149_56938277_56987237_56987415_57008790
ES.503.3	chr1	-	4873	10	NNC	ENSMUSG00000038331.16	novel	5805	11	NA	NA	14256	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.62936879248872	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCTGACTTTGTTTG	NA	False	NA	-35	True	AATAAA	-9	NA	56994743	56833150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_56836404_56870597_56870796_56884734_56884891_56889329_56889543_56910470_56910944_56930321_56930425_56937104_56937229_56938149_56938277_56987237_56987415_56994694
ES.503.4	chr1	-	1613	9	NNC	ENSMUSG00000038331.16	novel	331	2	NA	NA	14271	-47149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.95803989154981	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCCCATCTGTTTTATG	NA	False	NA	NA	False	AATAAA	-13	NA	56994728	56880295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_56880502_56884734_56884891_56889329_56889543_56910470_56910944_56930321_56930425_56937104_56937229_56938149_56938277_56987237_56987415_56994694
ES.503.5	chr1	-	2655	2	ISM	ENSMUSG00000038331.16	ENSMUST00000114415.10	5805	11	80472	75368	78454	-75366	internal_fragment	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	56930545	56908512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_56910944_56930321
ES.503.6	chr1	-	2992	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAATGACTCAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	56991393	56988401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_56988400_56991400
ES.5030.1	chr11	+	2743	2	Antisense	novelGene_ENSMUSG00000000538.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCACTTATTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	60161992	60164840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60163365_60163469
ES.5031.1	chr11	+	1466	1	Intergenic	novelGene_3957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATTGC	NA	False	NA	NA	False	NA	NA	NA	60237489	60238955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60237500_60239000
ES.5032.1	chr11	+	182	1	Intergenic	novelGene_3958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACCTATCCAGCCCT	NA	False	NA	NA	False	NA	NA	NA	60240398	60240580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60240400_60240600
ES.5033.1	chr11	+	8543	13	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-244	2	intron_retention	FALSE	non_canonical	0	0	junction_4	12.1412405553231	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGGTCTGGTGTCAGT	3177	False	NA	NA	False	AATATA	-16	NA	60243910	60285161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60243972_60244183_60244259_60244927_60245027_60249443_60249643_60254115_60254211_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118
ES.5033.2	chr11	+	2525	2	ISM	ENSMUSG00000056598.17	ENSMUST00000070805.13	2061	7	-244	15726	-244	-15726	5prime_fragment	FALSE	canonical	2	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATGTACTTTTCAGATA	3177	False	NA	NA	False	NA	NA	NA	60243910	60247104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60244259_60244927
ES.5033.3	chr11	+	3367	14	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-182	2	intron_retention	FALSE	non_canonical	0	0	junction_1	9.59659703000043	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGGTCTGGTGTCAGT	3239	False	NA	NA	False	AATATA	-16	NA	60243972	60285161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60244009_60244183_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118_60279763_60284522_60284655_60284950
ES.5033.4	chr11	+	2576	1	Genic_Genomic	ENSMUSG00000056598.17	novel	NA	NA	NA	NA	-123	-16223	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GTAAAGAAAAAAAAAAAAAG	3298	False	NA	NA	False	NA	NA	NA	60244031	60246607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_60244000_60246600
ES.5033.5	chr11	+	1985	14	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-72	4	at_least_one_novel_splicesite	FALSE	non_canonical	2	6	junction_1	7.40062367434196	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGTGTCAGTAT	3349	False	NA	NA	False	AATATA	-18	NA	60244082	60285163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
ES.5033.6	chr11	+	3434	13	NNC	ENSMUSG00000056598.17	novel	1917	14	NA	NA	-68	0	intron_retention	FALSE	non_canonical	2	6	junction_1	7.60847480700888	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGTGTCAGTATTCTC	3353	False	NA	NA	False	AATATA	-22	NA	60244086	60285167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266732_60268634_60268811_60275039_60275172_60278118_60279763_60284522_60284655_60284950
ES.5033.8	chr11	+	1759	2	ISM	ENSMUSG00000056598.17	ENSMUST00000070805.13	2061	7	24	16224	-4	-16224	5prime_fragment	FALSE	canonical	2	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTAAAGAAAAAAAAAAAAA	3445	False	NA	NA	False	NA	NA	NA	60244178	60246606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60244259_60244927
ES.5033.9	chr11	+	1923	4	ISM	ENSMUSG00000056598.17	ENSMUST00000094140.9	2438	8	11536	-3	11485	3	3prime_fragment	FALSE	canonical	3	24	junction_3	4.10960933531265	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAAGGACTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	60255690	60268107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60255859_60261294_60261442_60265903_60266024_60266619
ES.5034.1	chr11	+	177	1	Intergenic	novelGene_3959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60302268	60302445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60302300_60302400
ES.5035.1	chr11	-	5041	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	-42	0	-42	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243773	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5035.10	chr11	-	4266	13	NNC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	-24728	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.8734358477712	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTGTGTGATGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	60161223	60117542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60120575_60120922_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143
ES.5035.11	chr11	-	4796	14	NIC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	42	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	13.629935727251	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTGTGTGATGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	60243689	60117542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5035.12	chr11	-	4889	14	NIC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	23	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	13.4194947832132	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTGTGTGATGTCT	NA	False	NA	-3	True	AATAAA	-12	NA	60243708	60117542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60243582
ES.5035.13	chr11	-	3052	10	NNC	ENSMUSG00000000538.19	novel	2151	13	NA	NA	-17114	1442	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	17.8013732304249	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATATGTGGTATGACTT	NA	False	NA	NA	False	NA	NA	NA	60153609	60129953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60130231_60130308_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474
ES.5035.14	chr11	-	2101	13	FSM	ENSMUSG00000000538.19	ENSMUST00000064019.15	2151	13	53	-3	53	3	multi-exon	FALSE	canonical	1	2	junction_1	13.4935684268057	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTCATGTGTGTATCT	NA	False	NA	NA	False	AATAAA	-16	NA	60243678	60131392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5035.15	chr11	-	2201	13	NNC	ENSMUSG00000000538.19	novel	2151	13	NA	NA	-35543	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.4600735011817	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATAGTCATGTGTGTA	4598	False	NA	NA	False	AATAAA	-13	NA	60172038	60131395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60132172_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60171839
ES.5035.16	chr11	-	6379	9	FSM	ENSMUSG00000000538.19	ENSMUST00000142225.2	3013	9	21	-3387	21	3387	multi-exon	FALSE	canonical	0	0	junction_2	20.0308356041379	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGTACTAACATACTT	NA	False	NA	NA	False	ATTAAA	-16	NA	60243710	60140269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60145643_60146756_60146910_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5035.17	chr11	-	209	1	Intergenic	novelGene_3956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	660	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAACCTGACTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	60184589	60184380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60184400_60184600
ES.5035.18	chr11	-	1765	9	NNC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	-1	74697	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.513459713576	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAATCAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	60307863	60216754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60216910_60291640_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.19	chr11	-	2711	1	Antisense	novelGene_ENSMUSG00000056598.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAGAAAACAAA	2073	False	NA	NA	False	NA	NA	NA	60261314	60258603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60258600_60261300
ES.5035.20	chr11	-	7198	7	ISM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	1737	-2	1704	2	3prime_fragment	FALSE	canonical	3	286	junction_1	34.812194542845	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGTCTAAGCAGTTAC	NA	False	NA	2	True	NA	NA	NA	60306140	60291449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411
ES.5035.21	chr11	-	3713	7	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	-10	1	intron_retention	FALSE	canonical	3	57	junction_4	110.501005525842	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGTCTAAGCAGTTA	NA	False	NA	1	True	NA	NA	NA	60307887	60291450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60300232_60300411_60300457_60307576
ES.5035.22	chr11	-	1863	8	FSM	ENSMUSG00000042709.16	ENSMUST00000239016.2	1849	8	-1	-13	-1	1	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGTCTAAGCAGTTA	NA	False	NA	1	True	NA	NA	NA	60307926	60291450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.23	chr11	-	3714	7	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	11	-4	intron_retention	FALSE	canonical	3	286	junction_1	38.8887301584062	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	-4	True	NA	NA	NA	60307914	60291455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60300232_60300411_60300457_60307576
ES.5035.24	chr11	-	3720	8	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	3140	-4	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	105.362929623163	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	-4	True	NA	NA	NA	60304704	60291455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492
ES.5035.25	chr11	-	5355	1	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	11034	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATCTTTGGTCTAAGC	NA	False	NA	-4	True	NA	NA	NA	60296810	60291455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60291500_60296800
ES.5035.26	chr11	-	5185	2	ISM	ENSMUSG00000042709.16	ENSMUST00000138696.8	719	8	10799	-3205	10775	6	intron_retention	FALSE	canonical	3	346	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATCTTTGGTCTAA	NA	False	NA	-6	True	NA	NA	NA	60297069	60291457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60294779_60295205
ES.5035.27	chr11	-	5528	6	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	-1	6	intron_retention	FALSE	canonical	3	293	junction_5	33.8998525070538	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATCTTTGGTCTAA	NA	False	NA	-6	True	NA	NA	NA	60307863	60291457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60294779_60295205_60295319_60296601_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.28	chr11	-	1824	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-29	-846	4	6	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATCTTTGGTCTAA	NA	False	NA	-6	True	NA	NA	NA	60307873	60291457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.29	chr11	-	3420	7	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	55	junction_6	111.685073109863	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307863	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60300232_60300411_60300457_60307811
ES.5035.3	chr11	-	6309	3	ISM	ENSMUSG00000000538.19	ENSMUST00000153920.2	3791	4	3534	0	3534	0	3prime_fragment	FALSE	canonical	3	36	junction_2	3.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60126468	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60121068_60121926_60121964_60123723
ES.5035.30	chr11	-	1858	9	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307871	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
ES.5035.31	chr11	-	1885	9	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	150.736473273724	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307877	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
ES.5035.33	chr11	-	1580	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307891	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
ES.5035.34	chr11	-	1605	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307895	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
ES.5035.35	chr11	-	1637	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	146.351460532514	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307864	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
ES.5035.36	chr11	-	3078	6	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	8	junction_4	127.196540833468	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307863	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60298218_60300411_60300457_60307576
ES.5035.37	chr11	-	3728	3	ISM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	9961	12	9928	0	intron_retention	FALSE	canonical	3	286	junction_1	30	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60297916	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60292365_60294662_60294779_60295205
ES.5035.38	chr11	-	752	2	NNC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307863	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60292075_60307722
ES.5035.39	chr11	-	1704	7	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	137.938089977593	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307905	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300411_60300457_60307576
ES.5035.4	chr11	-	5117	16	NNC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	15.8974491315081	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243710	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60189806_60189946_60243582
ES.5035.40	chr11	-	1656	9	NIC	ENSMUSG00000042709.16	novel	719	8	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	131.387249666777	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307904	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307811
ES.5035.42	chr11	-	5295	6	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	55	junction_5	123.907384767818	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307871	60291463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60294779_60295205_60295319_60296601_60298218_60300085_60300232_60300411_60300457_60307811
ES.5035.44	chr11	-	3948	6	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	1	-9	intron_retention	FALSE	canonical	3	8	junction_4	147.968915654606	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTAAAAAAAAAGT	NA	False	NA	-21	True	NA	NA	NA	60307860	60291472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300411_60300457_60307576
ES.5035.45	chr11	-	3579	6	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	-9	-404	intron_retention	FALSE	canonical	3	8	junction_4	147.968915654606	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAAGCCTCATTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	60307886	60291867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300411_60300457_60307576
ES.5035.46	chr11	-	1396	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	417	0	-405	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCAAGCCTCATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	60307877	60291868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.47	chr11	-	3262	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	-407	intron_retention	FALSE	canonical	3	286	junction_1	38.8887301584062	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307877	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60300232_60300411_60300457_60307576
ES.5035.48	chr11	-	1208	8	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	20	-407	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	134.352870745478	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307905	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307811
ES.5035.49	chr11	-	3281	7	NIC	ENSMUSG00000042709.16	novel	949	8	NA	NA	2	-407	intron_retention	FALSE	canonical	3	57	junction_4	110.501005525842	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307875	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60300232_60300411_60300457_60307576
ES.5035.50	chr11	-	1415	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-33	-433	0	-407	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307877	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.51	chr11	-	4113	6	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	1	-407	intron_retention	FALSE	canonical	3	286	junction_1	41.4873474688368	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307876	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60298218_60300085_60300232_60300411_60300457_60307576
ES.5035.52	chr11	-	3024	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	3	-407	intron_retention	FALSE	canonical	3	55	junction_6	111.685073109863	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307874	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60300232_60300411_60300457_60307811
ES.5035.53	chr11	-	1156	8	NNC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	1	-407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	138.485393026242	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307876	60291870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300230_60300411_60300457_60307811
ES.5035.54	chr11	-	1441	9	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	-408	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATCAAGCCTCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	60307862	60291871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
ES.5035.55	chr11	-	1226	7	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	3	-410	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	118.191464252806	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAATATATCAAGCCTCA	NA	False	NA	NA	False	ATTAAA	-14	NA	60307858	60291873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300411_60300457_60307576
ES.5035.6	chr11	-	4747	13	NIC	ENSMUSG00000000538.19	novel	4849	14	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	12.558750822523	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243708	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60171024_60171110_60243582
ES.5035.7	chr11	-	11712	3	NNC	ENSMUSG00000000538.19	novel	3791	4	NA	NA	-210	0	intron_retention	FALSE	non_canonical	0	0	junction_2	21.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60130212	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60121068_60121926_60125756_60125856
ES.5035.8	chr11	-	5221	17	NNC	ENSMUSG00000000538.19	novel	4999	15	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	17.8009831189179	684	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243708	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60145525_60145643_60146756_60146885_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5035.9	chr11	-	4682	13	NIC	ENSMUSG00000000538.19	novel	4864	14	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	13.0373395377363	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243708	60117540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ES.5036.1	chr11	+	4326	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	-22	-21	-22	21	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCACTAGGAGAAATCT	NA	False	NA	48	True	AATAAA	-39	NA	60308065	60336124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.10	chr11	+	4125	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTCCAATTTGTAAG	NA	False	NA	22	True	AATAAA	-13	NA	60308105	60336098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308422_60308556_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.11	chr11	+	1760	6	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	19	-2491	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	180.327479880355	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATTATTTTTATGGT	NA	False	NA	NA	False	AATAAA	-16	NA	60308106	60333612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308671_60315612_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.13	chr11	+	4151	5	NIC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	22	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	189.484827888673	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCAATTTGTAAGTCA	NA	False	NA	25	True	AATAAA	-16	NA	60308109	60336101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60308671_60315599_60315660_60327173_60327276_60329268_60329400_60332804
ES.5036.14	chr11	+	4102	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTCCAATTTGTAAGTC	NA	False	NA	24	True	AATAAA	-15	NA	60308110	60336100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308399_60308553_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.15	chr11	+	4123	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGTCCAATTTGTAA	NA	False	NA	21	True	AATAAA	-12	NA	60308110	60336097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308419_60308549_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.16	chr11	+	1609	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	27	2647	27	-2647	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGCTGTCGGGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	60308114	60333456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.17	chr11	+	4013	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCAATTTGTAAGTCA	NA	False	NA	25	True	AATAAA	-16	NA	60308114	60336101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308315_60308555_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.19	chr11	+	4070	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	34	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTCCAATTTGTAAG	NA	False	NA	22	True	AATAAA	-13	NA	60308121	60336098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308385_60308558_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.2	chr11	+	1896	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	-10	2397	-10	-2397	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTGACGTAGTGACTT	NA	False	NA	NA	False	AAAACA	-3	NA	60308077	60333706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.20	chr11	+	3967	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	43	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCAATAAAG	NA	False	NA	-9	True	NA	NA	NA	60308130	60336067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308325_60308561_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.23	chr11	+	159	1	Intergenic	novelGene_3960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	60314455	60314614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60314500_60314600
ES.5036.24	chr11	+	2924	5	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	7512	-2491	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	197.242870593591	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATTATTTTTATGGT	NA	False	NA	NA	False	AATAAA	-16	NA	60315599	60333612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60315660_60323158_60323267_60327173_60327276_60327553_60329400_60332804
ES.5036.25	chr11	+	3264	1	NIC	ENSMUSG00000018415.15	novel	1717	8	NA	NA	24716	-36	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCAATAAAG	NA	False	NA	-9	True	NA	NA	NA	60332803	60336067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60332800_60336100
ES.5036.3	chr11	+	4487	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	211.416978714787	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCCAATTTGTAAGTCA	NA	False	NA	25	True	AATAAA	-16	NA	60308085	60336101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308671_60315599_60315660_60323158_60323267_60324459_60324664_60327173_60327276_60329268_60329400_60332804
ES.5036.4	chr11	+	1095	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	-2	3190	-2	-3190	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTTTGCGAGGAAATTA	NA	False	NA	NA	False	AATAAA	-18	NA	60308085	60332913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.5	chr11	+	4004	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCCAATTTGTAAGTCAA	NA	False	NA	26	True	AATAAA	-17	NA	60308096	60336102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308315_60308583_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.6	chr11	+	4046	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.227805370067	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCCAATTTGTAAGT	NA	False	NA	23	True	AATAAA	-14	NA	60308099	60336099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308334_60308554_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5036.7	chr11	+	4328	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	210.468326991656	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAATTTGTAAGTCAAAAC	NA	False	NA	29	True	AATAAA	-20	NA	60308102	60336105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308671_60315599_60315660_60323158_60323267_60324605_60324664_60327173_60327276_60329268_60329400_60332804
ES.5036.8	chr11	+	4371	7	NNC	ENSMUSG00000018415.15	novel	4283	6	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	206.298058374016	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGTCCAATTTGTAA	NA	False	NA	21	True	AATAAA	-12	NA	60308104	60336097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60331838_60331950_60332804
ES.5036.9	chr11	+	1310	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	18	2955	18	-2955	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCTGCATCACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	60308105	60333148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ES.5037.1	chr11	+	1847	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	-50	-9	-50	9	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTTCTGTGCTTGGT	NA	False	NA	49	True	NA	NA	NA	60345366	60359589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.10	chr11	+	2312	12	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-11	-59	intron_retention	FALSE	canonical	2	11	junction_2	140.295320162521	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345438	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347533_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355718_60358510_60358565_60358889
ES.5037.11	chr11	+	1701	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-10	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	209.454632451888	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345439	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347533_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352991_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358897
ES.5037.12	chr11	+	1251	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	24	513	-9	-513	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGAGTGGCTGATTCA	NA	False	NA	9	True	CATAAA	-13	NA	60345440	60359067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.13	chr11	+	1699	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-9	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	183.823511372548	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345440	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351708_60352153_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358561_60358889
ES.5037.14	chr11	+	1324	11	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-8	2195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	151.123823403195	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGCTGTTACGATATA	NA	False	NA	NA	False	AATAAA	-20	NA	60345441	60356067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347494_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658
ES.5037.15	chr11	+	5637	10	NIC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-3	7	intron_retention	FALSE	canonical	3	378	junction_7	38.9979423325493	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTTTCTGTGCTTG	NA	False	NA	47	True	NA	NA	NA	60345446	60359587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60345570_60347376_60350358_60350853_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.16	chr11	+	1691	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-3	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.199571958154	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345446	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351696_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.17	chr11	+	1748	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-3	-34	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	180.83761515668	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGCGGGGAAGCGGTTC	NA	False	NA	6	True	NA	NA	NA	60345446	60359546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347533_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352310_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.18	chr11	+	1909	14	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-3	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	178.697423682518	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGCGGGGAAGCGGTTC	NA	False	NA	6	True	NA	NA	NA	60345446	60359546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60357166_60357352_60358510_60358565_60358889
ES.5037.19	chr11	+	3618	11	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	0	-34	intron_retention	FALSE	canonical	0	0	junction_2	194.680867061969	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGCGGGGAAGCGGTTC	NA	False	NA	6	True	NA	NA	NA	60345449	60359546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347494_60350267_60350358_60350853_60350915_60351612_60352221_60352339_60352431_60353001_60353098_60353383_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.2	chr11	+	2078	9	NIC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	1	2193	intron_retention	FALSE	canonical	3	378	junction_8	48.4547146828872	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTGCTGTTACGATA	NA	False	NA	NA	False	AATAAA	-18	NA	60345417	60356065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60353098_60353383_60353461_60354959_60355049_60355658
ES.5037.21	chr11	+	4403	12	NIC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	21	-61	intron_retention	FALSE	canonical	3	378	junction_9	44.3131232544264	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAATAAAATTAAAAAAAA	NA	False	NA	-21	True	NA	NA	NA	60345470	60359519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60345570_60347376_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.22	chr11	+	2397	9	NIC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	-240	-59	intron_retention	FALSE	canonical	3	450	junction_7	30.6176011470527	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60350014	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60350358_60350853_60350915_60351612_60351704_60352147_60352431_60352999_60353098_60353383_60353461_60354959_60355718_60358510_60358565_60358889
ES.5037.3	chr11	+	2361	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	3	-576	3	576	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGCAGCCTGAGCCTC	NA	False	NA	NA	False	ATTAAA	-24	NA	60345419	60360156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.4	chr11	+	3790	13	FSM	ENSMUSG00000020537.10_ENSMUSG00000042678.18	ENSMUST00000018568.4	1788	13	11	-2013	11	2013	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCGGGAGAAAGTTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	60345427	60361593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.6	chr11	+	1750	13	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	12	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.422661921137	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345428	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347376_60347538_60350234_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.7	chr11	+	2000	14	NNC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	12	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	176.054557170758	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTTTCTGTGCTTG	NA	False	NA	47	True	NA	NA	NA	60345428	60359587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60345570_60347047_60347265_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ES.5037.8	chr11	+	4509	12	NIC	ENSMUSG00000020537.10	novel	1788	13	NA	NA	13	-59	intron_retention	FALSE	canonical	3	378	junction_10	44.38021299842	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAATTAAAAAAAAAA	NA	False	NA	-19	True	NA	NA	NA	60345429	60359521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60358565_60358889
ES.5038.1	chr11	-	424	1	Intergenic	novelGene_3961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3552	False	NA	NA	False	NA	NA	NA	60349377	60348953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60349000_60349400
ES.5039.1	chr11	-	3297	1	Antisense	novelGene_ENSMUSG00000042678.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTTGTCTAGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	60368080	60364783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60364800_60368100
ES.504.1	chr1	+	179	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAT	8905	False	NA	NA	False	NA	NA	NA	57386546	57386725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_57386500_57386700
ES.5040.1	chr11	+	132	1	Intergenic	novelGene_3962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60398725	60398857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60398700_60398900
ES.5041.1	chr11	+	2892	15	NIC	ENSMUSG00000042678.18	novel	7953	64	NA	NA	-449	-7	intron_retention	FALSE	canonical	0	0	junction_5	0.717848258651492	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAAATAATATA	NA	False	NA	NA	False	NA	NA	NA	60399910	60419188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60399979_60400359_60400539_60400757_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60411577_60411739_60412451_60412586_60414829_60414964_60415198_60415333_60417345_60417487_60418149
ES.5042.1	chr11	-	2578	1	Intergenic	novelGene_3963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATGAATGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	60425465	60422887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60422900_60425500
ES.5043.1	chr11	+	3591	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-454	2593	-454	1552	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGGTGAGAGAAAGCC	NA	False	NA	27	True	AATAAA	-36	NA	60428349	60446745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.10	chr11	+	5866	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	58	-194	58	194	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCTGGCTTTTCAGTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	60428861	60449532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.11	chr11	+	5001	3	ISM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	9221	0	9221	0	3prime_fragment	FALSE	canonical	3	390	junction_1	7.5	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	NA	False	NA	4	True	NA	NA	NA	60438024	60449338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60438595_60444539_60444696_60445063
ES.5043.12	chr11	+	4271	1	NIC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	16257	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATTTCACCTGTTTG	750	False	NA	-3	True	NA	NA	NA	60445060	60449331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60445100_60449300
ES.5043.2	chr11	+	6045	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-311	-4	-311	4	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTTGAGTTTTTTTTT	NA	False	NA	8	True	NA	NA	NA	60428492	60449342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.3	chr11	+	5357	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-304	677	-304	-677	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCATAGCTCCACTTC	NA	False	NA	NA	False	NA	NA	NA	60428499	60448661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.4	chr11	+	5377	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	17	336	17	-336	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAATTACTCCATTGCTT	NA	False	NA	NA	False	TTTAAA	-16	NA	60428820	60449002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.5	chr11	+	4905	5	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	172.863204586748	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	NA	False	NA	4	True	NA	NA	NA	60428830	60449338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063_60447996_60448793
ES.5043.6	chr11	+	2545	5	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	36	1541	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.863204586748	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGCTGTGGT	NA	False	NA	16	True	AATAAA	-25	NA	60428839	60446734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60428858_60429402_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.7	chr11	+	1733	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	46	3951	46	194	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACCTGGGTTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	60428849	60445387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.8	chr11	+	1935	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	48	3747	48	398	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACTATTCTTTTGCC	NA	False	NA	NA	False	TTTAAA	-25	NA	60428851	60445591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ES.5043.9	chr11	+	2164	5	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	172.863204586748	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCACCTGTTTGAGTTT	NA	False	NA	2	True	NA	NA	NA	60428859	60449336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063_60445221_60448728
ES.5044.1	chr11	-	871	1	Intergenic	novelGene_3964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCGTCTCAGCACTCT	NA	False	NA	NA	False	AATAAA	-21	NA	60428769	60427898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60427900_60428800
ES.5045.1	chr11	-	794	1	Intergenic	novelGene_3965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60433403	60432609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60432600_60433400
ES.5046.1	chr11	-	2660	1	Intergenic	novelGene_3966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGTGCTAATGTGCTA	NA	False	NA	NA	False	NA	NA	NA	60438385	60435725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60435700_60438400
ES.5047.1	chr11	-	283	1	Intergenic	novelGene_3967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATATAAAAATAAAA	NA	False	NA	NA	False	AATAAA	-10	NA	60443090	60442807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60442800_60443100
ES.5048.1	chr11	-	522	1	Intergenic	novelGene_3968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60449901	60449379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60449400_60449900
ES.5049.1	chr11	+	180	2	Antisense	novelGene_ENSMUSG00000093978.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	120	junction_1	0	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGGCAGAGGCTG	4091	False	NA	NA	False	NA	NA	NA	60458713	60566997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60458766_60566869
ES.5049.2	chr11	+	180	1	Intergenic	novelGene_3969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAGGCAGAGGCT	4092	False	NA	NA	False	NA	NA	NA	60458714	60458894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60458700_60458900
ES.5049.3	chr11	+	179	1	Intergenic	novelGene_3973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	60487971	60488150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60488000_60488200
ES.5049.4	chr11	+	179	1	Intergenic	novelGene_3975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAGGCAGAG	2	True	NA	NA	False	NA	NA	NA	60538112	60538291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60538100_60538300
ES.5049.5	chr11	+	180	1	Intergenic	novelGene_3976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGGCAGAGGCTG	8919	False	NA	NA	False	NA	NA	NA	60566817	60566997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60566800_60567000
ES.505.1	chr1	-	10914	2	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	14915	-9408	14915	9408	3prime_fragment	FALSE	canonical	3	14	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGATTTCTTTTGGA	4688	False	NA	NA	False	NA	NA	NA	57401788	57388972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_57399823_57401724
ES.505.10	chr1	-	596	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-19	3377	-19	-3377	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGATGCTTTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	57416722	57401757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_57401923_57414406_57414679_57416563
ES.505.2	chr1	-	2954	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	37	-939	37	939	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAATAAGAAAA	NA	False	NA	NA	False	TATAAA	-27	NA	57416666	57397441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
ES.505.3	chr1	-	2326	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	26	-300	26	300	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTGTATTAAATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	57416677	57398080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
ES.505.4	chr1	-	4114	3	NIC	ENSMUSG00000097519.3	novel	2052	4	NA	NA	54	214	intron_retention	FALSE	canonical	3	59	junction_2	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGGATATTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	57416649	57398166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57401923_57414406_57414679_57416563
ES.505.5	chr1	-	2261	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-21	-188	-21	188	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAACTAAAAACA	NA	False	NA	NA	False	TTTAAA	-30	NA	57416724	57398192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
ES.505.6	chr1	-	2082	5	NNC	ENSMUSG00000097519.3	novel	2052	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.2113093408845	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAATAGATTCTGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	57416687	57398380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57399823_57401724_57401923_57408332_57408379_57414406_57414679_57416563
ES.505.7	chr1	-	3959	3	NNC	ENSMUSG00000097519.3	novel	2052	4	NA	NA	39	-5	intron_retention	FALSE	canonical	2	6	junction_2	35	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAGTCAAAATAGATTC	NA	False	NA	NA	False	AATAAA	-14	NA	57416664	57398385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57401923_57414406_57414679_57416514
ES.505.8	chr1	-	1003	3	ISM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	-19	2970	-19	-2970	5prime_fragment	FALSE	canonical	3	59	junction_2	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTATGGCTACACAATG	NA	False	NA	NA	False	NA	NA	NA	57416722	57401350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_57401923_57414406_57414679_57416563
ES.505.9	chr1	-	915	3	NNC	ENSMUSG00000097519.3	novel	2052	4	NA	NA	-18	-3022	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGGAATTATAATTTCAA	NA	False	NA	NA	False	NA	NA	NA	57416721	57401402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57401923_57414406_57414679_57416598
ES.5050.1	chr11	-	2126	2	Intergenic	novelGene_3970	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATTGAAGCTAATC	NA	False	NA	NA	False	NA	NA	NA	60478596	60469106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60469471_60476834
ES.5051.1	chr11	-	196	1	Intergenic	novelGene_3971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACTAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	60480650	60480454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60480500_60480600
ES.5052.1	chr11	-	174	1	Intergenic	novelGene_3972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	60481252	60481078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60481100_60481300
ES.5053.1	chr11	-	175	1	Intergenic	novelGene_3974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATTGT	5929	False	NA	NA	False	NA	NA	NA	60531393	60531218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60531200_60531400
ES.5054.1	chr11	+	4487	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-212	-7	-90	7	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGGACACACTGGT	NA	False	NA	46	True	AATAAA	-31	NA	60590458	60605019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.10	chr11	+	4347	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	-42	-2	-42	2	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACACATGTGGACACA	NA	False	NA	41	True	AATAAA	-26	NA	60590506	60605014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.11	chr11	+	6100	21	NIC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-41	-31	intron_retention	FALSE	canonical	3	67	junction_20	58.1044533577247	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCATTTAATAT	NA	False	NA	8	True	ATTAAA	-22	NA	60590507	60604981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.13	chr11	+	3501	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-148	915	-26	-915	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCAGGCTTCTCTAATG	NA	False	NA	NA	False	NA	NA	NA	60590522	60604097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.14	chr11	+	4663	20	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-26	-6	intron_retention	FALSE	canonical	3	223	junction_6	31.3939316965623	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590522	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.15	chr11	+	6281	14	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	223	junction_5	35.1899326647089	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGCACACATGTGGAC	NA	False	NA	38	True	AATAAA	-23	NA	60590522	60605011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60598239_60598406_60598475_60599369_60599720_60600260_60600955_60601112_60603320_60603447_60603555_60603746
ES.5054.16	chr11	+	6016	15	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-24	-31	intron_retention	FALSE	canonical	0	0	junction_4	83.6546594088836	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCATTTAATAT	NA	False	NA	8	True	ATTAAA	-22	NA	60590524	60604981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595808_60596792_60597400_60597784_60597940_60598014_60598239_60598406_60599524_60599614_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.17	chr11	+	5040	19	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-24	-6	intron_retention	FALSE	canonical	3	223	junction_6	35.0752717930742	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590524	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.18	chr11	+	5628	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-19	-1	intron_retention	FALSE	canonical	1	2	junction_2	70.3373300602177	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGCACACATGTGGAC	NA	False	NA	38	True	AATAAA	-23	NA	60590529	60605011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60594274_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.19	chr11	+	7872	14	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-17	-6	intron_retention	FALSE	canonical	3	237	junction_10	33.7168860123064	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590531	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60595577_60595676_60595808_60596792_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599720_60600260_60600554_60600806_60600955_60601112_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.2	chr11	+	4444	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-59	1	intron_retention	TRUE	canonical	3	15	junction_15	68.4275346625903	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCACACATGTGGACAC	NA	False	NA	40	True	AATAAA	-25	NA	60590489	60605013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.20	chr11	+	4359	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-17	-31	intron_retention	FALSE	canonical	1	1	junction_2	70.5311810478174	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCATTTAATAT	NA	False	NA	8	True	ATTAAA	-22	NA	60590531	60604981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595511_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.21	chr11	+	3964	21	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-16	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	101.612056371279	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTTTTTAATATTG	NA	False	NA	-12	True	ATTAAA	-2	NA	60590532	60604961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598083_60599443_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.22	chr11	+	6928	15	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-15	-51	intron_retention	FALSE	canonical	3	237	junction_10	31.7449176391807	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTTTTTAATATTG	NA	False	NA	-12	True	ATTAAA	-2	NA	60590533	60604961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60600554_60600806_60600955_60601112_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.23	chr11	+	6180	20	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	223	junction_5	33.0270601719425	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGCACACATGTGGAC	NA	False	NA	38	True	AATAAA	-23	NA	60590544	60605011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.24	chr11	+	4285	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	11	-22	intron_retention	FALSE	canonical	1	6	junction_13	70.7848147557087	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590559	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600332_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.25	chr11	+	4127	17	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	21	-1	intron_retention	FALSE	canonical	0	0	junction_1	77.8273078279726	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGCACACATGTGGAC	NA	False	NA	38	True	AATAAA	-23	NA	60590569	60605011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.26	chr11	+	4403	20	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	52	-2	intron_retention	FALSE	canonical	3	46	junction_5	63.5205814356888	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCTGCACACATGTGGA	NA	False	NA	37	True	AATAAA	-22	NA	60590600	60605010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597266_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.27	chr11	+	6296	16	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-58	-22	intron_retention	FALSE	canonical	3	46	junction_5	70.0103484414189	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590612	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595808_60596792_60596949_60597018_60597182_60597266_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60600554_60600806_60600955_60601112_60601267_60602161_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.30	chr11	+	3954	20	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	87.5065173670936	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATCTGCACACATGTGG	NA	False	NA	36	True	AATAAA	-21	NA	60590624	60605009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598191_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.31	chr11	+	4178	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-40	-22	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	82.5680781437032	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590630	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597805_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.32	chr11	+	4263	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-40	-1	intron_retention	FALSE	canonical	0	0	junction_4	71.8604724448706	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGCACACATGTGGAC	NA	False	NA	38	True	AATAAA	-23	NA	60590630	60605011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596836_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.34	chr11	+	5850	19	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-40	-22	intron_retention	FALSE	canonical	1	2	junction_2	71.6596034417725	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590630	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60594274_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599720_60600260_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.35	chr11	+	5191	20	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-34	-6	intron_retention	FALSE	canonical	3	223	junction_6	34.3274923538254	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590636	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.36	chr11	+	4348	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-34	-6	intron_retention	FALSE	canonical	0	0	junction_1	92.1923397034699	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590636	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60594406_60594557_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.37	chr11	+	4289	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-34	-6	intron_retention	FALSE	non_canonical	0	0	junction_11	71.795125182703	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590636	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598468_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.38	chr11	+	4354	20	NIC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-34	-22	intron_retention	FALSE	canonical	3	67	junction_19	60.9635011827101	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590636	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.39	chr11	+	3258	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	96	949	-26	-949	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCAGCTGCCATCCCT	NA	False	NA	NA	False	ATTAAA	-31	NA	60590644	60604063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.4	chr11	+	4345	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-54	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	80.74533747412	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590494	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.40	chr11	+	5323	18	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-21	-22	intron_retention	FALSE	canonical	3	223	junction_5	36.0048055231693	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590649	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599720_60600260_60600554_60600806_60600955_60601112_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.41	chr11	+	3390	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-21	-910	intron_retention	FALSE	canonical	0	0	junction_16	71.9398359742361	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCTCTAATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	60590649	60604102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601278_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.42	chr11	+	4609	18	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-20	-918	intron_retention	FALSE	canonical	3	223	junction_6	32.1213098536284	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTGCAGGCTTCTCTA	NA	False	NA	NA	False	NA	NA	NA	60590650	60604094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60599720_60600260_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.43	chr11	+	4594	19	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	223	junction_5	32.2314641918517	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590661	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.45	chr11	+	3945	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	118	240	-4	-240	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGGCCTGTGTGTATT	NA	False	NA	NA	False	NA	NA	NA	60590666	60604772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.46	chr11	+	4195	20	NNC	ENSMUSG00000020536.13	novel	788	3	NA	NA	-748	-2	intron_retention	FALSE	canonical	0	0	junction_1	72.2517528470672	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCTGCACACATGTGGA	NA	False	NA	37	True	AATAAA	-22	NA	60594274	60605010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60594390_60595485_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.49	chr11	+	3989	18	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	5002	6	650	-6	3prime_fragment	FALSE	canonical	3	223	junction_3	33.9863599751409	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60595672	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.5	chr11	+	4494	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	-50	-22	intron_retention	FALSE	canonical	0	0	junction_2	90.1747610384673	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590498	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595176_60595244_60595485_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.50	chr11	+	3736	16	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	1767	-22	intron_retention	FALSE	canonical	0	0	junction_8	80.4245954640467	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60596789	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.51	chr11	+	3688	17	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	1914	-22	intron_retention	FALSE	canonical	0	0	junction_11	92.0563473843602	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60596936	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601278_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ES.5054.52	chr11	+	4259	13	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	1926	-22	intron_retention	FALSE	canonical	3	15	junction_7	80.9135340965898	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60596948	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.53	chr11	+	2897	10	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	8698	7	4346	-7	3prime_fragment	FALSE	canonical	3	237	junction_4	35.3944265682998	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTACATCTGCACACAT	NA	False	NA	32	True	AATAAA	-17	NA	60599368	60605005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.54	chr11	+	2824	9	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	4486	-31	intron_retention	FALSE	canonical	3	237	junction_3	36.4363743393878	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCATTTAATAT	NA	False	NA	8	True	ATTAAA	-22	NA	60599508	60604981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.55	chr11	+	2199	6	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	10440	6	6088	-6	3prime_fragment	FALSE	canonical	3	273	junction_1	21.3072757526625	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60601110	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.6	chr11	+	4329	20	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-50	-6	intron_retention	FALSE	canonical	0	0	junction_12	73.8085792519483	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590498	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.7	chr11	+	4312	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-48	-6	intron_retention	FALSE	canonical	0	0	junction_9	71.8887160825675	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	False	NA	33	True	AATAAA	-18	NA	60590500	60605006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598134_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.8	chr11	+	4200	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	-169	237	-47	-237	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTGTGTGTATTGTG	NA	False	NA	NA	False	NA	NA	NA	60590501	60604775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5054.9	chr11	+	6832	18	NIC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	-45	-22	intron_retention	FALSE	canonical	3	223	junction_5	34.5407837772196	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAATATCTTTTAAAC	NA	False	NA	17	True	AATAAA	-2	NA	60590503	60604990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60590768_60593609_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ES.5055.1	chr11	+	177	1	Intergenic	novelGene_3977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTAAAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	60616501	60616678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60616500_60616700
ES.5056.1	chr11	+	2549	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	-27	0	-27	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619196	60623777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
ES.5056.2	chr11	+	2730	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-59	-1955	-14	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619209	60623777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60619394_60621108_60621619_60621741
ES.5056.3	chr11	+	2653	3	NNC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-11	0	intron_retention	TRUE	canonical	0	0	junction_2	77.5	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619212	60623777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60619394_60621108_60621619_60621815
ES.5056.4	chr11	+	2838	2	ISM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	2	-1	2	1	intron_retention	FALSE	canonical	3	155	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTAATTCTTGCTGG	NA	False	NA	15	True	AATAAA	-18	NA	60619225	60623778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60619394_60621108
ES.5056.5	chr11	+	4423	2	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	8	0	intron_retention	FALSE	canonical	3	114	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619231	60623777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60621619_60621741
ES.5056.6	chr11	+	2535	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619257	60623777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
ES.5057.1	chr11	-	4347	29	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	13	13	intron_retention	TRUE	canonical	0	0	junction_16	63.6604012214302	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGAAAAGCCG	NA	False	NA	NA	False	ATTAAA	-37	NA	60618076	60604935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610535_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.10	chr11	-	3933	29	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	64.0912933053392	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618046	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.14	chr11	-	4272	29	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	29	0	intron_retention	FALSE	canonical	3	67	junction_19	53.1630505988849	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618020	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.15	chr11	-	4049	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	73.0110671981488	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618079	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606915_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.16	chr11	-	4091	29	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	5	0	intron_retention	FALSE	canonical	3	227	junction_18	35.2049393566022	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618044	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.18	chr11	-	4091	31	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	79.3220159994829	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618064	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617598_60617655_60617952
ES.5057.19	chr11	-	4494	27	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-4	0	intron_retention	FALSE	canonical	3	227	junction_17	31.2712176490529	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618093	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.2	chr11	-	5432	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	-1340	-32	-1340	12	multi-exon	FALSE	canonical	3	227	junction_19	35.2603363548522	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGACAGAAAAGCC	NA	False	NA	NA	False	ATTAAA	-36	NA	60619429	60604936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.21	chr11	-	4013	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.3387743760887	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618046	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606915_60607159_60607230_60607371_60607480_60607670_60607968_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.23	chr11	-	4884	28	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	5	0	intron_retention	FALSE	canonical	3	227	junction_18	35.079138435269	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618044	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.24	chr11	-	4371	28	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	3	0	intron_retention	FALSE	canonical	3	227	junction_18	32.4745336544933	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618046	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.26	chr11	-	4027	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	62.9803585636332	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618066	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614262_60615616_60615689_60615983_60616095_60617952
ES.5057.28	chr11	-	4247	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-1339	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_29	62.6923105541336	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60619428	60604968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60619104
ES.5057.31	chr11	-	4398	28	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	13	-6	intron_retention	FALSE	canonical	3	67	junction_18	52.9779828482235	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60618076	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.34	chr11	-	2672	16	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	592	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.0682182840639	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60610375	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607696_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850
ES.5057.35	chr11	-	5984	28	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-1355	-6	intron_retention	FALSE	canonical	0	0	junction_23	64.6360073262009	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60619444	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60612431_60612507_60612684_60613120_60613221_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60616095_60617952
ES.5057.39	chr11	-	4619	29	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	227	junction_18	34.8787988933807	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60618069	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.41	chr11	-	4161	28	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	5	-6	intron_retention	FALSE	canonical	3	227	junction_17	34.2877359127021	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60618044	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.45	chr11	-	4084	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	62.7415475071421	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGTACTTTTAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	60618092	60604974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613798_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.47	chr11	-	3977	30	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	93.4164852401622	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCAGTACTTTTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	60618046	60604975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606924_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608313_60608935_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610527_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.48	chr11	-	3663	27	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	5	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	70.9383952254332	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCAGTACTTTTAA	NA	False	NA	NA	False	ATTAAA	-19	NA	60618044	60604975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.50	chr11	-	4703	28	NNC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	1	-8	intron_retention	FALSE	canonical	3	67	junction_17	51.0499902930091	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCAGTACTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	60618088	60604976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60610699_60610831_60611045_60611186_60611321_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ES.5057.8	chr11	-	3871	13	NIC	ENSMUSG00000002812.5	novel	4060	30	NA	NA	-300	-9	intron_retention	FALSE	canonical	3	236	junction_10	32.8870119584549	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTAAAACAACTAGTTT	NA	False	NA	NA	False	ATTAAA	-37	NA	60611267	60604957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606553_60606628_60606784_60606917_60607371_60607480_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60610699_60610831_60611045_60611186
ES.5058.1	chr11	+	175	1	Intergenic	novelGene_3978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	60626372	60626547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60626400_60626500
ES.5059.1	chr11	+	3078	10	Antisense	novelGene_ENSMUSG00000002814.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCACCCCACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	60631379	60644278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60631530_60633263_60633954_60634760_60634879_60636639_60636785_60638689_60638860_60638939_60639048_60639988_60640122_60640229_60640415_60641400_60641606_60643104
ES.5059.2	chr11	+	4449	1	Antisense	novelGene_ENSMUSG00000002814.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCACCCCACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	60639829	60644278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60639800_60644300
ES.5059.3	chr11	+	3151	2	Antisense	novelGene_ENSMUSG00000002814.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCACCCCACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	60640141	60644278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60640415_60641400
ES.5059.4	chr11	+	2619	2	Antisense	novelGene_ENSMUSG00000002814.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60640141	60644259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60641603_60643101
ES.5059.5	chr11	+	1652	3	Antisense	novelGene_ENSMUSG00000002814.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCACCCCACCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	60640141	60644278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60640415_60641400_60641606_60643104
ES.506.1	chr1	+	3154	3	NIC	ENSMUSG00000038323.4	novel	541	3	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	9987	False	NA	8	True	ATTAAA	-19	NA	57416738	57424582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57417106_57418865_57418972_57421901
ES.506.10	chr1	+	5763	1	NIC	ENSMUSG00000038323.4	novel	3008	2	NA	NA	2018	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATTTGGATGTGTT	NA	False	NA	5	True	ATTAAA	-16	NA	57418816	57424579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57418800_57424600
ES.506.2	chr1	+	3040	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	-28	-4	-28	4	multi-exon	FALSE	canonical	3	44	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGATGTGTTTATCTGT	9999	False	NA	12	True	ATTAAA	-23	NA	57416750	57424586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57417106_57421901
ES.506.3	chr1	+	1500	4	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	-4	-1805	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.16024689946929	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATGAGATGCAAGATT	NA	False	NA	NA	False	AATAAA	-21	NA	57416774	57422777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57417106_57418865_57418972_57419200_57419388_57421901
ES.506.4	chr1	+	3186	3	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTATTTGGATGTG	NA	False	NA	3	True	ATTAAA	-14	NA	57416782	57424577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57417106_57419200_57419388_57421901
ES.506.5	chr1	+	5049	3	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	-1	0	intron_retention	FALSE	canonical	1	1	junction_2	2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	8	True	ATTAAA	-19	NA	57416790	57424582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57418972_57419200_57419388_57421901
ES.506.6	chr1	+	4857	2	NIC	ENSMUSG00000038323.4	novel	3008	2	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	1	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGTTATTTGGATGTG	NA	False	NA	3	True	ATTAAA	-14	NA	57416790	57424577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57418972_57421901
ES.506.7	chr1	+	5264	2	NNC	ENSMUSG00000038323.4	novel	3008	2	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	8	True	ATTAAA	-19	NA	57416804	57424582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57419388_57421901
ES.506.8	chr1	+	3275	4	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.16024689946929	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	8	True	ATTAAA	-19	NA	57416804	57424582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57417106_57418865_57418972_57419200_57419388_57421901
ES.506.9	chr1	+	1355	3	NNC	ENSMUSG00000038323.4	novel	541	3	NA	NA	11	-1809	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGATGATGAGATGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	57416809	57422773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57417106_57419200_57419388_57421901
ES.5060.1	chr11	+	8028	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	-637	0	-636	0	multi-exon	FALSE	canonical	3	54	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTCCTAATTGTAGG	NA	False	NA	13	True	AATAAA	-21	NA	60667713	60679113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.10	chr11	+	5203	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	16	2172	16	-2172	multi-exon	FALSE	canonical	3	54	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACAGTTTTGGGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	60668366	60676941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.11	chr11	+	7195	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	17	179	17	-179	multi-exon	FALSE	canonical	3	54	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGATATTAATTTATTT	NA	False	NA	NA	False	AATAAA	-31	NA	60668367	60678934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.12	chr11	+	6350	3	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	18	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTGTACTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	60668368	60678918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60669694_60670521_60671208_60674579
ES.5060.13	chr11	+	6165	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	29	1197	29	-1197	multi-exon	FALSE	canonical	3	54	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAATTAGTTACCATTT	NA	False	NA	NA	False	AATACA	-16	NA	60668379	60677916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.14	chr11	+	7962	2	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGGTTCCTAATTGTA	NA	False	NA	11	True	AATAAA	-19	NA	60668409	60679111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60671840_60674579
ES.5060.15	chr11	+	6736	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	331	324	331	-324	multi-exon	FALSE	canonical	3	54	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCCACCGTCTGTAAA	NA	False	NA	NA	False	NA	NA	NA	60668681	60678789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.16	chr11	+	4676	2	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	3164	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTAAGATATTAATTT	NA	False	NA	NA	False	AATAAA	-27	NA	60671514	60678930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60671840_60674579
ES.5060.2	chr11	+	4013	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	-616	3994	-615	3226	multi-exon	FALSE	canonical	3	54	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGAGCCTTCTGGTGT	NA	False	NA	NA	False	ACTAAA	-17	NA	60667734	60675119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.3	chr11	+	5384	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	-6	2013	-5	-2013	multi-exon	FALSE	canonical	3	54	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATTAATTAATGCTG	NA	False	NA	NA	False	TTTAAA	-19	NA	60668344	60677100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.4	chr11	+	3549	1	FSM	ENSMUSG00000049323.9	ENSMUST00000102667.5	3544	1	-2	-3	-2	3	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTCAATGGTCATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	60668347	60671896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60668300_60671900
ES.5060.5	chr11	+	4536	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	-1	2856	0	-2856	multi-exon	FALSE	canonical	3	54	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTGTATGCATCAGTT	NA	False	NA	NA	False	AGTAAA	-18	NA	60668349	60676257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.6	chr11	+	4781	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	3	2607	3	-2607	multi-exon	FALSE	canonical	3	54	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGTGTCTGTTACATG	NA	False	NA	NA	False	NA	NA	NA	60668353	60676506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.7	chr11	+	4206	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	6	3179	6	-3179	multi-exon	FALSE	canonical	3	54	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGGGTGGCTATCTTT	NA	False	NA	NA	False	NA	NA	NA	60668356	60675934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5060.8	chr11	+	8270	2	NNC	ENSMUSG00000049323.9	novel	7391	2	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGGTTCCTAATTGT	NA	False	NA	10	True	AATAAA	-18	NA	60668357	60679110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60672097_60674579
ES.5060.9	chr11	+	7656	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	13	-278	13	278	multi-exon	FALSE	canonical	3	54	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGATGTATGCCTG	NA	False	NA	NA	False	TTTAAA	-24	NA	60668363	60679391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60671208_60674579
ES.5061.1	chr11	+	213	1	Intergenic	novelGene_3979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGAAAATGATCCT	NA	False	NA	NA	False	NA	NA	NA	60684216	60684429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60684200_60684400
ES.5062.1	chr11	+	178	1	Intergenic	novelGene_3981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAATAAAACAAAAC	70	False	NA	NA	False	NA	NA	NA	60704768	60704946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60704800_60704900
ES.5063.1	chr11	-	3571	1	Antisense	novelGene_ENSMUSG00000089581.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCCAGTCTGATGGGGA	NA	False	NA	NA	False	NA	NA	NA	60629583	60626012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60626000_60629600
ES.5063.11	chr11	-	5588	20	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-5	1866	intron_retention	FALSE	canonical	1	2	junction_19	58.9616054235926	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	60668096	60629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650164_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60656843_60656962_60667747
ES.5063.12	chr11	-	5548	19	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	0	1866	intron_retention	FALSE	canonical	2	18	junction_18	36.8222289277805	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	60668091	60629017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.13	chr11	-	4438	20	NIC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	-7	905	combination_of_known_junctions	FALSE	canonical	2	18	junction_19	35.8833907056155	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAAGTAGTTAGTTTTCC	NA	False	NA	NA	False	AAAACA	-20	NA	60668098	60629978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.15	chr11	-	4285	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	68	-612	2	612	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTGTTTTTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	60668123	60630271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.16	chr11	-	4100	20	NNC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	6	560	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	48.4087512978394	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTCCATTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	60668107	60630323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636644_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.17	chr11	-	4125	19	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	33	560	intron_retention	FALSE	canonical	2	3	junction_14	39.8550227638396	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTCCATTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	60668057	60630323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650164_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.18	chr11	-	4159	19	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-5	559	intron_retention	FALSE	canonical	0	0	junction_13	52.7783625698596	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTTCCATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	60668096	60630324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647476_60647575_60650122_60650232_60652557_60652630_60653289_60653368_60654191_60654252_60667747
ES.5063.20	chr11	-	3917	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	-127	-49	-127	49	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGACCTCTTCTTGGGAC	NA	False	NA	50	True	NA	NA	NA	60668318	60630834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.21	chr11	-	3558	20	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_19	35.8833907056155	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668123	60630883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.22	chr11	-	3784	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	5	0	intron_retention	FALSE	canonical	2	2	junction_10	40.9662702002226	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668085	60630883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643185_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.25	chr11	-	4402	21	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_19	58.0149980608463	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668090	60630884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60656843_60656962_60657059_60657705_60667747
ES.5063.27	chr11	-	3675	19	NIC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	5	0	intron_retention	FALSE	canonical	2	18	junction_18	36.8222289277805	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668085	60630884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.29	chr11	-	4550	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	33	0	intron_retention	FALSE	non_canonical	0	0	junction_17	40.5614574924279	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668057	60630884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654256_60667747
ES.5063.3	chr11	-	5576	18	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	17	1873	intron_retention	FALSE	canonical	3	121	junction_7	17.0539546804316	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTCATGGTGTCTGT	NA	False	NA	0	True	NA	NA	NA	60668073	60629010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.31	chr11	-	3739	20	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	17	-1	intron_retention	FALSE	canonical	1	2	junction_19	50.5394171610695	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGTGGCATTCAG	NA	False	NA	-1	True	AATAAA	-14	NA	60668073	60630885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60656843_60656962_60667747
ES.5063.32	chr11	-	3772	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	96	-1	intron_retention	FALSE	canonical	0	0	junction_6	40.6151658312721	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGTGGCATTCAG	NA	False	NA	-1	True	AATAAA	-14	NA	60667994	60630885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639126_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.33	chr11	-	3716	19	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-7	-1	intron_retention	FALSE	canonical	0	0	junction_6	50.6738542660102	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGTGGCATTCAG	NA	False	NA	-1	True	AATAAA	-14	NA	60668098	60630885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636646_60636787_60638691_60638858_60638937_60639126_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.34	chr11	-	3706	20	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_18	51.2539708616403	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGTGGCATTCAG	NA	False	NA	-1	True	AATAAA	-14	NA	60668088	60630885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60665722_60665793_60667747
ES.5063.35	chr11	-	3597	20	NNC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.8586065591626	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGTGGCATTCAG	NA	False	NA	-1	True	AATAAA	-14	NA	60668097	60630885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646702_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.39	chr11	-	3590	18	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_10	41.4049125347092	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCTGGTGGCATTCA	NA	False	NA	-2	True	AATAAA	-13	NA	60668118	60630886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.4	chr11	-	5738	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	-127	-1870	-127	1870	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	-3	True	NA	NA	NA	60668318	60629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.41	chr11	-	7036	20	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	-5	-2	intron_retention	TRUE	non_canonical	0	0	junction_18	51.1111438971083	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTCTGGTGGCATTCA	NA	False	NA	-2	True	AATAAA	-13	NA	60668096	60630886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60655770_60655829_60657705_60667747
ES.5063.42	chr11	-	3461	4	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	4692	-20	intron_retention	FALSE	canonical	3	129	junction_1	19.8158185969358	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAATGCATCCAT	NA	False	NA	-20	True	NA	NA	NA	60638812	60630904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60636787_60638691
ES.5063.43	chr11	-	4569	18	NNC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	34	-20	intron_retention	FALSE	canonical	0	0	junction_2	52.3857134701681	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAATGCATCCAT	NA	False	NA	-20	True	NA	NA	NA	60668056	60630904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634764_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639987_60640122_60640229_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.44	chr11	-	4437	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	1	-896	0	896	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGACATGTGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	60668090	60631820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.45	chr11	-	3573	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-28	-3	-6	3	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTAGATCTTTTGCGT	NA	False	NA	NA	False	AATAAA	-20	NA	60668119	60632713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.46	chr11	-	3227	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-5	320	-5	23	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATCTGCATTACATC	NA	False	NA	NA	False	AATAAA	-21	NA	60668096	60633036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5063.47	chr11	-	2662	13	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-70	17728	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	328.139536715032	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	60701987	60661201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60661358_60679177_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.48	chr11	-	3049	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	-191	0	-191	0	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCATATTATTTATT	NA	False	NA	-8	True	AATAAA	-19	NA	60702282	60678929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.49	chr11	-	2686	11	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	60	-1	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	350.546844230554	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCCTCATATTATTTAT	NA	False	NA	-9	True	AATAAA	-18	NA	60702031	60678930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.50	chr11	-	2717	11	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_9	355.35677846356	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCCTCATATTATTTAT	NA	False	NA	-9	True	AATAAA	-18	NA	60702097	60678930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60697771_60697869_60701729
ES.5063.53	chr11	-	2787	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	42	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	337.559789622887	821	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACACTCCTCATAT	NA	False	NA	-16	True	AATAAA	-11	NA	60702049	60678937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688371_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.54	chr11	-	2680	11	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-86	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	357.924070160139	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACACTCCTCATAT	NA	False	NA	-16	True	AATAAA	-11	NA	60702003	60678937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.58	chr11	-	3622	4	ISM	ENSMUSG00000020534.15	ENSMUST00000172804.8	582	5	-770	-506	-770	159	intron_retention	FALSE	canonical	3	983	junction_2	127.232944720392	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTAGTGTTAGGGCTGG	9289	False	NA	NA	False	NA	NA	NA	60686593	60679567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774
ES.5063.6	chr11	-	5505	20	NIC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	-9	1870	combination_of_known_junctions	FALSE	canonical	2	18	junction_19	35.8833907056155	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	-3	True	NA	NA	NA	60668200	60629013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.60	chr11	-	1998	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	70	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	342.349104118748	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGTGGGTCCTGTAGCA	NA	False	NA	-2	True	ATTAAA	-26	NA	60702021	60679712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688557_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.61	chr11	-	3481	8	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	76	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	532.981563413572	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGTGGGTCCTGTAGCA	NA	False	NA	-2	True	ATTAAA	-26	NA	60702015	60679712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685275_60687447_60695088_60695235_60697771_60697869_60701729
ES.5063.62	chr11	-	1977	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	76	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	337.559789622887	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGGTGGGTCCTGTAGC	NA	False	NA	-3	True	ATTAAA	-25	NA	60702015	60679713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688371_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.64	chr11	-	1959	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-69	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	342.378264545309	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTACTCGGTGGGTCC	NA	False	NA	-9	True	ATTAAA	-19	NA	60701986	60679719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692850_60695084_60695235_60697771_60697869_60701729
ES.5063.65	chr11	-	2027	13	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	87	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	437.11173247428	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60702004	60679722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60695878_60695928_60697771_60697869_60701729
ES.5063.67	chr11	-	4241	6	NIC	ENSMUSG00000020534.15	novel	1295	8	NA	NA	1376	4	intron_retention	FALSE	canonical	3	1111	junction_5	68.3098821547805	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	3762	False	NA	-12	True	ATTAAA	-16	NA	60692120	60679722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419
ES.5063.68	chr11	-	4644	11	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-7	4	intron_retention	FALSE	canonical	3	983	junction_2	76.0405155164009	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60702098	60679722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.71	chr11	-	1945	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-63	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	337.559789622887	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGCTTACTCGGTGGG	NA	False	NA	-12	True	ATTAAA	-16	NA	60701980	60679722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688359_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.72	chr11	-	2319	15	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-6308	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	479.364673078772	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTGCTTACTCGGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	60708852	60679724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729_60701924_60702292_60702356_60707966_60708235_60708759
ES.5063.73	chr11	-	1950	12	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-69	2	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	338.75286586571	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTGCTTACTCGGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	60701986	60679724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695227_60697771_60697869_60701729
ES.5063.74	chr11	-	6282	10	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-57	2	intron_retention	FALSE	canonical	3	983	junction_2	80.1526321741491	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTGCTTACTCGGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	60701974	60679724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.75	chr11	-	1942	12	NNC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	-57	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	338.704044487317	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTCTGCTTACTCGGTG	NA	False	NA	-14	True	ATTAAA	-14	NA	60701974	60679724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697861_60701725
ES.5063.76	chr11	-	945	5	NNC	ENSMUSG00000020534.15	novel	1295	8	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	507.614211286485	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTGCTTACTCGG	NA	False	NA	-16	True	ATTAAA	-12	NA	60701983	60679726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683822_60701729
ES.5063.77	chr11	-	5473	7	FSM	ENSMUSG00000020534.15	ENSMUST00000173260.8	1283	7	-138	-4052	36	-244	multi-exon	FALSE	canonical	3	1109	junction_4	39.2233632191609	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGTAAATAATTGGGCA	NA	False	NA	NA	False	NA	NA	NA	60702055	60684018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.78	chr11	-	9051	5	NIC	ENSMUSG00000020534.15	novel	1283	7	NA	NA	66	-244	intron_retention	FALSE	canonical	3	1109	junction_2	42.8682574873297	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGTAAATAATTGGGCA	NA	False	NA	NA	False	NA	NA	NA	60702025	60684018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.79	chr11	-	5785	4	NIC	ENSMUSG00000020534.15	novel	1283	7	NA	NA	-1639	-266	intron_retention	FALSE	canonical	3	1109	junction_3	14.8548533034381	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	747	False	NA	NA	False	NA	NA	NA	60695135	60684040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60689502_60692253_60692415_60692741_60692858_60695088
ES.5063.8	chr11	-	5358	20	NNC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	-5	1869	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	48.4136722064098	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	-4	True	NA	NA	NA	60668096	60629014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650164_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
ES.5063.81	chr11	-	1805	7	FSM	ENSMUSG00000020534.15	ENSMUST00000173260.8	1283	7	-78	-444	-78	444	multi-exon	FALSE	canonical	3	1109	junction_4	39.2233632191609	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60701995	60687626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ES.5063.82	chr11	-	179	1	Intergenic	novelGene_3980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAACAACTTTCC	1859	False	NA	NA	False	NA	NA	NA	60694023	60693844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60693800_60694000
ES.5063.83	chr11	-	135	1	Genic_Genomic	ENSMUSG00000020534.15	novel	NA	NA	NA	NA	-105	-7344	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60702649	60702514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_60702500_60702600
ES.5063.9	chr11	-	7252	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	-8	-3702	-8	1869	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	-4	True	NA	NA	NA	60668099	60629014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ES.5064.1	chr11	+	176	1	Intergenic	novelGene_3982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATAAAATAAAAA	7993	False	NA	NA	False	NA	NA	NA	60715272	60715448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60715300_60715400
ES.5065.1	chr11	-	167	1	Intergenic	novelGene_3983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCCAAAGAAA	6315	False	NA	NA	False	NA	NA	NA	60717108	60716941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60716900_60717100
ES.5066.1	chr11	+	1335	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	-48	266	-48	-266	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGTCTTCTGAGTCTCG	NA	False	NA	45	True	AATAAA	-42	NA	60721408	60748983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ES.5066.10	chr11	+	167	1	Intergenic	novelGene_3985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGGAAAAG	6886	False	NA	NA	False	NA	NA	NA	60735377	60735544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60735400_60735500
ES.5066.2	chr11	+	1207	6	NIC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-19	-272	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	104.781677787674	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTACAGGTCTTCTGA	NA	False	NA	39	True	AATAAA	-36	NA	60721437	60748977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60746525_60746679_60748543
ES.5066.3	chr11	+	3138	6	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	2	278	2	-278	intron_retention	FALSE	canonical	3	194	junction_1	27.7012635090893	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAACCATGTACAGGTC	NA	False	NA	33	True	AATAAA	-30	NA	60721458	60748971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525
ES.5066.4	chr11	+	2318	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	39	-804	-9	804	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTCCTCCCTGTCTGC	NA	False	NA	NA	False	GATAAA	-19	NA	60721495	60750053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ES.5066.5	chr11	+	734	5	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-8	-5861	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	92.9986559042656	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAATGGTGTGTTCTTG	NA	False	NA	NA	False	TTTAAA	-28	NA	60721496	60743388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244
ES.5066.6	chr11	+	1286	8	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	-3	-278	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	111.068098250486	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAACCATGTACAGGTC	NA	False	NA	33	True	AATAAA	-30	NA	60721501	60748971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60747658_60747715_60748543
ES.5066.7	chr11	+	1482	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	23	0	-23	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTATTCATCCTACCTT	NA	False	NA	NA	False	NA	NA	NA	60721504	60749226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ES.5066.8	chr11	+	5627	5	NNC	ENSMUSG00000042569.14	novel	1553	7	NA	NA	17	-292	intron_retention	FALSE	canonical	3	38	junction_1	96.3262684837319	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGTTCACAGTAGAAGA	NA	False	NA	19	True	AATAAA	-16	NA	60721521	60748957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60721587_60734990_60735170_60739926_60742785_60743244_60743338_60746525
ES.5066.9	chr11	+	207	1	Intergenic	novelGene_3984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGATTGGTT	3305	False	NA	NA	False	NA	NA	NA	60731796	60732003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60731800_60732000
ES.5067.1	chr11	-	1063	1	Antisense	novelGene_ENSMUSG00000042569.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60749433	60748370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60748400_60749400
ES.5068.1	chr11	+	1630	1	Intergenic	novelGene_3986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCGAGTAGAGTTGAC	NA	False	NA	NA	False	NA	NA	NA	60751843	60753473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60751800_60753500
ES.5069.1	chr11	-	1505	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	478	-526	-7	526	multi-exon	FALSE	canonical	3	675	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGCTTTGTGTCTTTTT	7827	False	NA	NA	False	NA	NA	NA	60769620	60754751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60756175_60769538
ES.5069.2	chr11	-	992	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	463	2	-22	-2	multi-exon	FALSE	canonical	3	675	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTGTTCTCTTTTCTG	7812	False	NA	-7	True	ATTAAA	-15	NA	60769635	60755279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60756175_60769538
ES.5069.4	chr11	-	1267	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	242	2	-9	-2	multi-exon	FALSE	canonical	3	26	junction_1	10	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCTGTTCTCTTTTCTG	7825	False	NA	-7	True	ATTAAA	-15	NA	60769622	60755279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60756175_60766585_60766874_60769538
ES.5069.5	chr11	-	956	2	NNC	ENSMUSG00000043284.13	novel	1457	2	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTCTGTTCTCTTTTC	7846	False	NA	-9	True	ATTAAA	-13	NA	60769601	60755281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60756169_60769532
ES.507.1	chr1	+	1697	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	-204	2047	-204	-2047	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTAGTGTTCTTTAAAG	NA	False	NA	11	True	AATAAA	-14	NA	57445282	57455065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ES.507.2	chr1	+	3115	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	425	0	-6	0	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCATGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	57445911	57457112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ES.507.3	chr1	+	2636	4	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	426	2746	-5	-2746	5prime_fragment	FALSE	canonical	3	314	junction_1	15.195028426722	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57445912	57454366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398
ES.507.4	chr1	+	1238	6	NNC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	-4	-2052	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	160.978756362447	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATTGCTAGTGTTCTT	NA	False	NA	6	True	AATAAA	-9	NA	57445913	57455060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57446477_57447866_57447949_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ES.507.5	chr1	+	5072	3	NIC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	-4	-2048	intron_retention	FALSE	canonical	3	314	junction_1	18.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTAGTGTTCTTTAAA	NA	False	NA	10	True	AATAAA	-13	NA	57445913	57455064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57446382_57449070_57451009_57452398
ES.507.6	chr1	+	5488	3	NIC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	0	-2049	intron_retention	FALSE	canonical	3	301	junction_2	25	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGCTAGTGTTCTTTAA	NA	False	NA	9	True	AATAAA	-12	NA	57445917	57455063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57451009_57452398_57452547_57454814
ES.507.7	chr1	+	8472	1	FSM	ENSMUSG00000025971.7	ENSMUST00000185709.2	4874	1	8	-3606	8	-2715	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATTGATTTAATATA	NA	False	NA	NA	False	NA	NA	NA	57445925	57454397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57445900_57454400
ES.507.8	chr1	+	3163	6	NNC	ENSMUSG00000025971.7	novel	3540	5	NA	NA	27	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.735310370808	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAAACTCTTTGGGTC	NA	False	NA	NA	False	NA	NA	NA	57445944	57457103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57446382_57447623_57447714_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ES.5070.1	chr11	+	2299	1	Antisense	novelGene_ENSMUSG00000043284.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGCGAGAGTGCAG	NA	False	NA	NA	False	NA	NA	NA	60769776	60772075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_60769800_60772100
ES.5071.1	chr11	-	3555	3	Intergenic	novelGene_3987	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTTGTGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	60777934	60771419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60773607_60773820_60775067_60777812
ES.5072.1	chr11	+	176	1	Intergenic	novelGene_3988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	497	False	NA	NA	False	NA	NA	NA	60778079	60778255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60778100_60778300
ES.5073.1	chr11	-	175	1	Intergenic	novelGene_3989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTTTTCCAAG	NA	False	NA	NA	False	NA	NA	NA	60785273	60785098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60785100_60785300
ES.5074.1	chr11	+	2947	14	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-1207	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	152.493204815142	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAAGCCTGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	60821651	60843637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60822161_60822295_60822493_60822815_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.10	chr11	+	2225	11	NNC	ENSMUSG00000018932.10	novel	2096	11	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	172.247757605143	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822849	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841898_60842030_60842589
ES.5074.11	chr11	+	6004	10	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-3	7	intron_retention	FALSE	canonical	3	361	junction_6	29.2840495074632	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTGACTGTGGCAAGC	NA	False	NA	NA	False	NA	NA	NA	60822855	60843627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60837598_60837936_60840887_60841983_60842030_60842589
ES.5074.13	chr11	+	2221	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	4	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	125.111916840632	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822862	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833917_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.15	chr11	+	3200	10	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-4	0	intron_retention	FALSE	canonical	3	361	junction_4	30.1809358517739	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAAGCCTGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	60822875	60843637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.16	chr11	+	2704	11	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	22	32	1	-15	intron_retention	FALSE	canonical	3	361	junction_6	27.1705723163867	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822880	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983
ES.5074.18	chr11	+	2091	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	-10	15	2	-15	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822881	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.19	chr11	+	2365	11	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	2	-15	intron_retention	FALSE	canonical	3	361	junction_5	28.649607327152	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822881	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.2	chr11	+	3255	13	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-1207	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	118.285994052081	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60821651	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60822161_60822295_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.20	chr11	+	2023	11	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	3	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	130.772932979268	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60822882	60843600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833180_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.21	chr11	+	3222	11	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	4	-15	intron_retention	FALSE	canonical	3	361	junction_6	27.7857877340197	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822883	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.22	chr11	+	2943	7	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	4	-1274	intron_retention	FALSE	canonical	3	361	junction_3	29.1299769233612	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTGAAGTTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	60822883	60841373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746
ES.5074.23	chr11	+	3106	9	NIC	ENSMUSG00000018932.10	novel	2096	11	NA	NA	-6	-15	intron_retention	FALSE	canonical	2	10	junction_4	142.531082136494	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822885	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.24	chr11	+	6227	8	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	14	-16	intron_retention	FALSE	canonical	3	361	junction_3	31.7933377695802	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	60822905	60843604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60840887_60841983_60842030_60842589
ES.5074.25	chr11	+	3302	10	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	15	-3	intron_retention	FALSE	canonical	3	361	junction_4	28.2646225676001	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGCAAGCCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	60822906	60843634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.27	chr11	+	2094	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	50	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	125.19531847715	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822941	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840752_60840887_60841983_60842030_60842589
ES.5074.28	chr11	+	5731	11	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	9875	-3800	28	3800	3prime_fragment	FALSE	canonical	3	361	junction_5	26.6863260865935	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAGCTCAGTTACAAAC	2023	False	NA	NA	False	NA	NA	NA	60832733	60847437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.29	chr11	+	4102	2	FSM	ENSMUSG00000018932.10	ENSMUST00000137609.2	600	2	-2527	-975	-2527	2	multi-exon	FALSE	canonical	3	453	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	1109	False	NA	NA	False	NA	NA	NA	60838960	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60842030_60842589
ES.5074.3	chr11	+	2637	15	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-1202	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	173.91940427587	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	60821656	60843604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60821789_60822060_60822161_60822295_60822493_60822815_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.4	chr11	+	3539	12	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-1202	-3	intron_retention	FALSE	canonical	1	4	junction_1	124.270432910921	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGCAAGCCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	60821656	60843634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60822161_60822815_60823098_60832705_60832773_60833130_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.5	chr11	+	2395	13	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-884	-15	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	119.364375617965	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60821974	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60822161_60822815_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.7	chr11	+	2564	11	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-40	-15	intron_retention	FALSE	canonical	3	361	junction_5	26.8143618234706	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCG	NA	False	NA	NA	False	NA	NA	NA	60822818	60843605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.8	chr11	+	2255	12	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-25	2	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	124.270432910921	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822833	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833227_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ES.5074.9	chr11	+	3296	11	NIC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	-16	2	intron_retention	FALSE	canonical	3	361	junction_6	27.9256154811313	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGAGACTGACTGTGG	NA	False	NA	NA	False	NA	NA	NA	60822842	60843622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60842030_60842589
ES.5075.1	chr11	-	7229	1	Genic_Genomic	ENSMUSG00000018931.4	novel	NA	NA	NA	NA	11232	6894	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAACAACAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	60793406	60786177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_60786200_60793400
ES.5075.10	chr11	-	4469	1	NIC	ENSMUSG00000018931.4	novel	4179	3	NA	NA	73	-3317	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGGCCGGTGTGGTG	6697	False	NA	NA	False	AAAACA	-3	NA	60804565	60800096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60800100_60804600
ES.5075.11	chr11	-	692	3	Intergenic	novelGene_3990	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	1.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAATTTTGTTACTGT	3381	False	NA	NA	False	NA	NA	NA	60807881	60806551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60806785_60807034_60807387_60807774
ES.5075.12	chr11	-	883	4	NNC	ENSMUSG00000042549.11	novel	1291	2	NA	NA	15	5189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.29983164553722	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGTAATTTTGTTACT	NA	False	NA	NA	False	NA	NA	NA	60822678	60806553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60806785_60807034_60807229_60807774_60807946_60822391
ES.5075.13	chr11	-	3372	1	Genic_Genomic	ENSMUSG00000042549.11	novel	NA	NA	NA	NA	9585	2006	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAACAAAAAAAAATTTTT	6208	False	NA	NA	False	NA	NA	NA	60813108	60809736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_60809700_60813100
ES.5075.14	chr11	-	1218	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	25	48	25	-48	multi-exon	FALSE	canonical	3	28	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	60822668	60811790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60812732_60822391
ES.5075.16	chr11	-	5285	1	Genic_Genomic	ENSMUSG00000042549.11	novel	NA	NA	NA	NA	-55	-5721	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTATGGGCTTAACTGCC	NA	False	NA	NA	False	NA	NA	NA	60822748	60817463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_60817500_60822700
ES.5075.17	chr11	-	3017	1	NIC	ENSMUSG00000042549.11	novel	1291	2	NA	NA	2	-7932	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTTTTCTCTGAGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	60822691	60819674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_60819700_60822700
ES.5075.2	chr11	-	3896	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	33	250	33	-250	multi-exon	TRUE	canonical	3	156	junction_2	31	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTTTACAACTTTGGGCA	6657	False	NA	NA	False	NA	NA	NA	60804605	60793321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60796948_60797707_60797827_60804454
ES.5075.3	chr11	-	3380	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	-9	808	-9	-808	multi-exon	FALSE	canonical	3	156	junction_2	31	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTGCTTTTCTCTCG	6615	False	NA	1	True	ATTAAA	-24	NA	60804647	60793879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_60796948_60797707_60797827_60804454
ES.5075.4	chr11	-	3466	3	NNC	ENSMUSG00000018931.4	novel	4179	3	NA	NA	230	-810	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	109	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	6854	False	NA	-1	True	ATTAAA	-22	NA	60804408	60793881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60796948_60797707_60797827_60804127
ES.5075.5	chr11	-	3499	3	Fusion	ENSMUSG00000042549.11_ENSMUSG00000018931.4	novel	4179	3	NA	NA	-14	-812	multi-exon	FALSE	canonical	3	4	junction_2	107	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCTCTCTGCTTTTCT	NA	False	NA	-3	True	ATTAAA	-20	NA	60822707	60793883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_60796948_60797707_60797827_60822391
ES.5075.6	chr11	-	4024	3	NNC	ENSMUSG00000018931.4	novel	4179	3	NA	NA	17	-813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGCTCTCTGCTTTTC	6641	False	NA	-4	True	ATTAAA	-19	NA	60804621	60793884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60797623_60797707_60797827_60804454
ES.5075.7	chr11	-	2244	2	NNC	ENSMUSG00000018931.4	novel	4179	3	NA	NA	8457	-813	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTGCTCTCTGCTTTTC	NA	False	NA	-4	True	ATTAAA	-19	NA	60796181	60793884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60793944_60793996
ES.5075.8	chr11	-	4225	2	NNC	ENSMUSG00000018931.4	novel	4179	3	NA	NA	224	-817	intron_retention	FALSE	canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAAAGGTGCTCTCTGCT	6848	False	NA	-8	True	ATTAAA	-15	NA	60804414	60793888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_60797827_60804127
ES.5075.9	chr11	-	2457	1	ISM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	7950	1160	7950	-1160	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAAGTTTCCTTACTCCT	NA	False	NA	NA	False	AATACA	-13	NA	60796688	60794231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_60794200_60796700
ES.5076.1	chr11	-	8077	1	Antisense	novelGene_ENSMUSG00000018932.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGAGGCACAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	60844112	60836035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60836000_60844100
ES.5076.2	chr11	-	3326	5	Antisense	novelGene_ENSMUSG00000018932.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60844112	60836063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60837598_60837936_60838013_60840741_60840886_60841982_60842029_60842586
ES.5076.3	chr11	-	3884	4	Antisense	novelGene_ENSMUSG00000018932.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60844112	60836063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_60837598_60837936_60838013_60840741_60840886_60841982
ES.5077.1	chr11	+	182	1	Intergenic	novelGene_3991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTACTTATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	60855866	60856048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60855900_60856000
ES.5078.1	chr11	+	4417	3	NNC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	-17392	2142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGAGATGTGCGTC	NA	False	NA	11	True	ATTAAA	-25	NA	60895997	60964099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60896087_60904733_60904916_60959953
ES.5078.10	chr11	+	4581	3	NNC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	169	2138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACTGTGTTGAGATGTG	NA	False	NA	7	True	ATTAAA	-21	NA	60913558	60964095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60913677_60957491_60957813_60959953
ES.5078.11	chr11	+	2003	1	NIC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	3323	2	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTTGCTCTTCTGT	NA	False	NA	28	True	AATAAA	-40	NA	60959952	60961955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60960000_60962000
ES.5078.2	chr11	+	2724	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-433	0	-433	0	multi-exon	FALSE	canonical	3	70	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGCTCTTCTGTTT	NA	False	NA	30	True	AATAAA	-42	NA	60912956	60961957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60913677_60959953
ES.5078.3	chr11	+	2035	2	NNC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	-431	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATCTGGCTTGCTCTTC	NA	False	NA	25	True	AATAAA	-37	NA	60912958	60961952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_60912995_60959953
ES.5078.4	chr11	+	4844	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-411	-2142	-411	2142	multi-exon	FALSE	canonical	3	70	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGAGATGTGCGTC	NA	False	NA	11	True	ATTAAA	-25	NA	60912978	60964099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60913677_60959953
ES.5078.5	chr11	+	2258	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	-273	306	-273	-302	multi-exon	FALSE	canonical	3	70	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	60913116	60961651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_60913677_60959953
ES.5078.6	chr11	+	4810	3	NIC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	-98	2136	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTGTGTTGAGATG	NA	False	NA	5	True	ATTAAA	-19	NA	60913291	60964093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60913677_60957491_60957777_60959953
ES.5078.8	chr11	+	2571	3	NIC	ENSMUSG00000042529.15	novel	2291	2	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCTTGCTCTTCTGT	NA	False	NA	28	True	AATAAA	-40	NA	60913392	60961955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_60913677_60957491_60957777_60959953
ES.5079.1	chr11	-	176	1	Intergenic	novelGene_3992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAAAACCCATCT	NA	False	NA	NA	False	NA	NA	NA	60939124	60938948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60938900_60939100
ES.508.1	chr1	-	1466	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	389	-8	-38	8	multi-exon	FALSE	canonical	3	47	junction_6	29.7341966257639	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCCGTCTTTGTTTTT	NA	False	NA	-7	True	AATAAA	-38	NA	57445871	57427387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ES.508.10	chr1	-	1872	7	NIC	ENSMUSG00000048495.17	novel	1398	8	NA	NA	1	-12	intron_retention	FALSE	canonical	3	102	junction_5	16.6774964814533	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTACATAAAGTCTATTG	NA	False	NA	-30	True	AATAAA	-31	NA	57445629	57427410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57427912_57429800_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.508.11	chr1	-	652	6	NNC	ENSMUSG00000048495.17	novel	695	7	NA	NA	-11	-127	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	61.6798184173721	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTCTTACAGGTCTAA	NA	False	NA	NA	False	AATAAA	-22	NA	57445641	57432470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57432647_57432743_57432851_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ES.508.12	chr1	-	176	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAATA	NA	False	NA	NA	False	NA	NA	NA	57443106	57442930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_57442900_57443100
ES.508.2	chr1	-	1403	8	NIC	ENSMUSG00000048495.17	novel	766	9	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	11	junction_4	41.2820067539437	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTATTGGTGGAGT	NA	False	NA	-23	True	AATAAA	-38	NA	57445636	57427403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.508.3	chr1	-	5794	5	NIC	ENSMUSG00000048495.17	novel	695	7	NA	NA	-5	-5	intron_retention	FALSE	canonical	3	11	junction_1	53.3356119304916	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTATTGGTGGAGT	NA	False	NA	-23	True	AATAAA	-38	NA	57445635	57427403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.508.4	chr1	-	1901	7	NNC	ENSMUSG00000048495.17	novel	1847	8	NA	NA	-6	-7	intron_retention	FALSE	canonical	0	0	junction_6	47.4154217762768	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGTCTATTGGTGGA	NA	False	NA	-25	True	AATAAA	-36	NA	57445636	57427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57427912_57429800_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440681_57445542
ES.508.5	chr1	-	1206	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	185	7	-18	-7	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGTCTATTGGTGGA	NA	False	NA	-25	True	AATAAA	-36	NA	57445648	57427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.508.6	chr1	-	1224	9	FSM	ENSMUSG00000048495.17	ENSMUST00000160837.8	766	9	-39	-419	-11	-7	multi-exon	FALSE	canonical	3	10	junction_4	49.931828526502	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGTCTATTGGTGGA	NA	False	NA	-25	True	AATAAA	-36	NA	57445641	57427405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57432828_57432854_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.508.7	chr1	-	6155	5	NIC	ENSMUSG00000048495.17	novel	1754	7	NA	NA	11	-8	intron_retention	FALSE	canonical	3	102	junction_3	17.1373130916139	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAAGTCTATTGGTGG	NA	False	NA	-26	True	AATAAA	-35	NA	57445591	57427406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57427912_57429800_57429918_57430607_57435956_57440546_57440683_57445542
ES.508.8	chr1	-	3082	7	NIC	ENSMUSG00000048495.17	novel	1398	8	NA	NA	-6	-8	intron_retention	FALSE	canonical	3	102	junction_5	16.86877457184	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAAGTCTATTGGTGG	NA	False	NA	-26	True	AATAAA	-35	NA	57445636	57427406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ES.5080.1	chr11	-	588	3	Intergenic	novelGene_3993	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGGAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	60997068	60982748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_60983104_60989850_60989955_60996939
ES.5081.1	chr11	+	809	2	Intergenic	novelGene_3994	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGTTTCTGAGAATCT	NA	False	NA	NA	False	ACTAAA	-3	NA	60997226	60999481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_60997355_60998800
ES.5082.1	chr11	+	175	1	Intergenic	novelGene_3995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	61006013	61006188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61006000_61006200
ES.5083.1	chr11	-	176	1	Intergenic	novelGene_3996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACCG	NA	False	NA	NA	False	NA	NA	NA	61026184	61026008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61026000_61026200
ES.5084.1	chr11	+	2132	2	ISM	ENSMUSG00000010142.13	ENSMUST00000123378.2	662	3	4177	-1612	4177	-1	3prime_fragment	FALSE	canonical	2	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACAGTATGCTTTGGTGG	NA	False	NA	NA	False	AATAAA	-30	NA	61037667	61040197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_61037844_61038241
ES.5085.1	chr11	+	100	1	Intergenic	novelGene_3997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	61064513	61064613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61064500_61064600
ES.5086.1	chr11	-	4628	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	-189	-5	-189	5	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGCCTCATTACTAAC	NA	False	NA	1	True	AATAAA	-25	NA	61066070	61042605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.11	chr11	-	4435	13	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.9882011631344	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065853	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051368_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.12	chr11	-	5614	11	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	99.7829644779108	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065855	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61051397_61051504_61052139_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.13	chr11	-	3731	9	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	110.897968308712	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTCTGCCTCAT	NA	False	NA	-6	True	AATAAA	-18	NA	61065855	61042612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052198_61065606
ES.5086.14	chr11	-	4367	13	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.5116871710324	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACTCTCTGCCTCA	NA	False	NA	-7	True	AATAAA	-17	NA	61065822	61042613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045331_61046001_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.16	chr11	-	4427	12	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	124.864554717475	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACTCTCTGCCTCA	NA	False	NA	-7	True	AATAAA	-17	NA	61065844	61042613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051216_61051504_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.17	chr11	-	8012	10	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	294	junction_8	23.8612242915438	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACTCTCTGCCTCA	NA	False	NA	-7	True	AATAAA	-17	NA	61065860	61042613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61049245_61050030_61051504_61052139_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.18	chr11	-	4391	13	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	93.0272884098472	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGACTCTCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	61065849	61042615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054648_61057496_61057611_61059085_61059219_61065540
ES.5086.19	chr11	-	4345	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	-46	135	-46	-135	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTAGGAGTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	61065927	61042745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.2	chr11	-	6412	11	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	2	5	intron_retention	FALSE	canonical	3	276	junction_4	23.6450840556764	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTGCCTCATTACTAAC	NA	False	NA	1	True	AATAAA	-25	NA	61065853	61042605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.20	chr11	-	4064	14	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	-5	-148	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.4439760524486	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGATTGTACTGTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	61065860	61042758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61044992_61045192_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.21	chr11	-	2228	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	37	2169	11	65	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCGGCTCAGACGTTC	NA	False	NA	NA	False	AATACA	-38	NA	61065844	61044779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.3	chr11	-	4705	11	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_6	98.3465301879024	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTGCCTCATTACT	NA	False	NA	-2	True	AATAAA	-22	NA	61065860	61042608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.4	chr11	-	4279	12	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	94.1295046006492	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065874	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.5	chr11	-	5770	12	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	276	junction_4	26.447515467056	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065852	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.6	chr11	-	4376	13	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	93.0881825057414	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065834	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059096_61059219_61065540
ES.5086.7	chr11	-	7626	10	NIC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	276	junction_4	24.8645714537823	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065864	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5086.9	chr11	-	4467	13	NNC	ENSMUSG00000042506.16	novel	4434	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	92.9572781204116	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065860	61042610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61045340_61046005_61046210_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ES.5087.1	chr11	+	177	1	Intergenic	novelGene_3998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAACCTTTTA	NA	False	NA	NA	False	NA	NA	NA	61085914	61086091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61085900_61086100
ES.5088.1	chr11	+	1427	10	ISM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	3604	11	3604	-11	3prime_fragment	TRUE	canonical	1	1	junction_1	6.02668960992027	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTCGTGCATGCA	NA	False	NA	NA	False	AATAAA	-10	NA	61103174	61109236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ES.5088.2	chr11	+	1394	10	NNC	ENSMUSG00000019102.11	novel	1721	11	NA	NA	4902	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.96729573626261	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTCGTGCATGCA	NA	False	NA	NA	False	AATAAA	-10	NA	61104472	61109236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61104509_61104705_61104914_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ES.5089.1	chr11	+	5522	1	Intergenic	novelGene_3999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGCATGGTAGGCCAC	579	False	NA	NA	False	NA	NA	NA	61127333	61132855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61127300_61132900
ES.509.1	chr1	+	4340	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAATACTCAAGTC	NA	False	NA	NA	False	ATTAAA	-10	NA	57566765	57571105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_57566800_57571100
ES.5090.1	chr11	-	3204	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	-14	-99	-14	99	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGTTGTCATGCTTTT	1319	False	NA	NA	False	NA	NA	NA	61158025	61135579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.11	chr11	-	2985	10	NNC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	23	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	34.5703790999045	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAATTATTGTGTGTTA	1414	False	NA	NA	False	AATAAA	-7	NA	61157930	61135685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144599_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.12	chr11	-	2975	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	5	111	5	-111	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGTTGAACTTGCAC	1338	False	NA	NA	False	CATAAA	-16	NA	61158006	61135789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.13	chr11	-	2063	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	79	949	21	-949	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCAAAGTCTGTGTGT	1412	False	NA	NA	False	TTTAAA	-23	NA	61157932	61136627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.14	chr11	-	1844	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	-22	-1324	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAACTCAGTGTTTGAG	1369	False	NA	NA	False	NA	NA	NA	61157975	61137002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.3	chr11	-	3206	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	1331	False	NA	NA	False	AATAAA	-14	NA	61158013	61135678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.5	chr11	-	3983	10	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	23	junction_1	28.0994705806636	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGTGTGTTAATTT	1371	False	NA	NA	False	AATAAA	-11	NA	61157973	61135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61137148_61138754_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.6	chr11	-	3090	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	-2	3	-2	-3	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGTGTGTTAATTT	1331	False	NA	NA	False	AATAAA	-11	NA	61158013	61135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.8	chr11	-	3008	10	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	-16	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	34.292136376784	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGTGTGTTAATTT	1375	False	NA	NA	False	AATAAA	-11	NA	61157969	61135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144579_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5090.9	chr11	-	3038	11	NNC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4227533288446	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTGTGTGTTAATTT	1430	False	NA	NA	False	AATAAA	-11	NA	61157914	61135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61137148_61139261_61139309_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ES.5091.1	chr11	+	4848	1	Antisense	novelGene_ENSMUSG00000069855.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCACCCTAAAGAAATGC	8984	False	NA	NA	False	NA	NA	NA	61217724	61222572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_61217700_61222600
ES.5092.1	chr11	-	1966	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5529	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTGCTGAGAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	61227881	61192456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
ES.5092.2	chr11	-	2611	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5715	0	intron_retention	FALSE	canonical	2	3	junction_11	6.42438536147446	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTGCTGAGAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	61227695	61192456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61204584_61216622_61216721_61219353_61219452_61220586_61220632_61227640
ES.5092.3	chr11	-	514	1	Intergenic	novelGene_4000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAAATAAAAACG	462	False	NA	NA	False	NA	NA	NA	61205736	61205222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61205200_61205700
ES.5092.4	chr11	-	219	1	Intergenic	novelGene_4001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGAGGGGATCAGAG	460	False	NA	NA	False	NA	NA	NA	61205738	61205519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61205500_61205700
ES.5092.5	chr11	-	5687	4	NNC	ENSMUSG00000069855.10	novel	278	3	NA	NA	5524	16459	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.88561808316413	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTTCATATGTTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	61227886	61211267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61216513_61216622_61216721_61219353_61219452_61227640
ES.5093.1	chr11	-	2673	17	FSM	ENSMUSG00000010122.15	ENSMUST00000010267.10	2639	17	-33	-1	-33	1	multi-exon	FALSE	canonical	2	6	junction_16	9.25675429078681	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTGTAGATTATTAT	NA	False	NA	0	True	ATTAAA	-19	NA	61268940	61234225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61258498_61258544_61260076_61260120_61260943_61261093_61262581_61262651_61264180_61264283_61268738
ES.5093.2	chr11	-	2066	11	NNC	ENSMUSG00000010122.15	novel	2639	17	NA	NA	2030	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	8.3282651254628	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTGTAGATTATTAT	NA	False	NA	0	True	ATTAAA	-19	NA	61254448	61234225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254347
ES.5093.3	chr11	-	2164	12	NNC	ENSMUSG00000010122.15	novel	2987	18	NA	NA	1817	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.4454505894446	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGGCTGTAGATTATT	NA	False	NA	-2	True	ATTAAA	-17	NA	61254661	61234227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61254558
ES.5093.4	chr11	-	2104	10	NNC	ENSMUSG00000010122.15	novel	2639	17	NA	NA	2059	-3	intron_retention	FALSE	canonical	3	7	junction_9	8.67663244682428	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCTGGGCTGTAGATT	NA	False	NA	-5	True	ATTAAA	-14	NA	61254419	61234230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253767_61253848_61253947_61254347
ES.5093.5	chr11	-	1962	10	NNC	ENSMUSG00000010122.15	novel	2639	17	NA	NA	2383	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	12.6227308191743	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCTGGGCTGTAGATT	NA	False	NA	-5	True	ATTAAA	-14	NA	61254095	61234230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253652_61253767_61253848_61253947_61254025
ES.5094.1	chr11	-	3184	1	Intergenic	novelGene_4002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGTTTCATCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	61285137	61281953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61282000_61285100
ES.5094.2	chr11	-	1620	2	Intergenic	novelGene_4003	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCAGTTTCATCGCTTCT	8085	False	NA	NA	False	NA	NA	NA	61288486	61281954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61283397_61288308
ES.5095.1	chr11	+	4211	1	FSM	ENSMUSG00000109829.2	ENSMUST00000210265.2	4269	1	53	5	53	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAACTATGCCTCGGCTGT	NA	False	NA	NA	False	NA	NA	NA	61298896	61303107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61298900_61303100
ES.5095.2	chr11	+	4153	2	Genic_Genomic	ENSMUSG00000109829.2	novel	4269	1	NA	NA	56	-6	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACTATGCCTCGGCTG	NA	False	NA	NA	False	NA	NA	NA	61298899	61303106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_61299354_61299407
ES.5095.3	chr11	+	4154	2	Genic_Genomic	ENSMUSG00000109829.2	novel	4269	1	NA	NA	56	-4	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTATGCCTCGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	61298899	61303108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_61299343_61299397
ES.5096.10	chr11	-	3084	6	NIC	ENSMUSG00000001034.18	novel	3254	6	NA	NA	186	-5	intron_retention	FALSE	canonical	2	3	junction_5	94.077414930471	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61384828	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384012_61384349
ES.5096.11	chr11	-	3073	7	NNC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	31	-5	intron_retention	FALSE	canonical	3	23	junction_6	99.2041945797768	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385061	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331_61384760_61384905
ES.5096.12	chr11	-	3263	6	FSM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	-13	5	-13	-5	multi-exon	FALSE	canonical	3	31	junction_5	83.0093970584054	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385105	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331
ES.5096.13	chr11	-	3099	7	NNC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	23	junction_6	96.7608736353009	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385105	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384760_61384905
ES.5096.14	chr11	-	3067	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-38	-5	intron_retention	FALSE	canonical	3	42	junction_5	71.8410668690888	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385052	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384349_61384781_61384905
ES.5096.18	chr11	-	5303	2	ISM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	52	7	-26	-7	intron_retention	FALSE	canonical	3	248	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385040	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61380097_61380189
ES.5096.19	chr11	-	2997	7	NNC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	31	-7	intron_retention	FALSE	canonical	0	0	junction_1	99.2421281513048	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385061	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380093_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
ES.5096.2	chr11	-	2991	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	27	1	-3	-1	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTCATTTTTGGGG	NA	False	NA	0	True	AATACA	-18	NA	61385095	61379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
ES.5096.20	chr11	-	2838	7	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-26	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	87.1123157513078	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385040	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384737_61384953
ES.5096.21	chr11	-	3022	6	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-36	-7	intron_retention	FALSE	canonical	3	23	junction_5	85.4830977445249	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385050	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384472_61384760_61384905
ES.5096.22	chr11	-	1442	4	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-13	-7	intron_retention	FALSE	canonical	1	9	junction_3	107.654798107449	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385105	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61384905
ES.5096.23	chr11	-	3021	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	15	-7	intron_retention	FALSE	canonical	3	13	junction_4	77.5234731477434	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385077	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384472_61384781_61384905
ES.5096.24	chr11	-	3601	5	NNC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-38	-7	intron_retention	FALSE	canonical	3	23	junction_4	95.4158660810664	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385052	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61384760_61384905
ES.5096.26	chr11	-	3792	5	NNC	ENSMUSG00000001034.18	novel	3255	6	NA	NA	17	-7	intron_retention	FALSE	canonical	1	1	junction_4	99.8107584381564	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385075	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383604
ES.5096.27	chr11	-	2538	8	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	27	-7	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	80.0122439609931	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385065	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61380755_61381171_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
ES.5096.28	chr11	-	3074	6	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	-17	-7	intron_retention	FALSE	canonical	3	31	junction_4	82.27125865088	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385031	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384422_61384781_61384905
ES.5096.3	chr11	-	3174	5	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-36	-1	intron_retention	FALSE	canonical	3	175	junction_4	30.8737347918907	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTCATTTTTGGGG	NA	False	NA	0	True	AATACA	-18	NA	61385050	61379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384472
ES.5096.30	chr11	-	2795	6	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	176	-7	intron_retention	FALSE	canonical	0	0	junction_4	89.6638165594126	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61384838	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382455_61383729_61383896_61384472
ES.5096.31	chr11	-	3042	6	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-35	-7	intron_retention	FALSE	canonical	3	175	junction_4	30.6502854799103	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385049	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384472_61384781_61384905
ES.5096.32	chr11	-	3172	6	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	-24	-7	intron_retention	FALSE	canonical	3	31	junction_4	82.27125865088	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385038	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384331_61384781_61384905
ES.5096.33	chr11	-	2369	7	NNC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	6	-7	intron_retention	TRUE	canonical	0	0	junction_4	106.963259528162	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385008	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61381549_61382379_61382513_61383675_61383896_61384349
ES.5096.34	chr11	-	3068	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	30	-7	intron_retention	FALSE	canonical	3	10	junction_5	83.3534975604237	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385062	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384012_61384472_61384781_61384905
ES.5096.35	chr11	-	3131	5	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	175	junction_4	27.9419040152957	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385023	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472
ES.5096.36	chr11	-	3031	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	31	7	1	-7	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385091	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
ES.5096.37	chr11	-	3999	4	NNC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	12	-7	intron_retention	FALSE	canonical	1	1	junction_2	105.738671576045	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385080	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61382513_61383731_61384781_61384905
ES.5096.38	chr11	-	1407	4	NNC	ENSMUSG00000001034.18	novel	3255	6	NA	NA	-49	-7	intron_retention	FALSE	canonical	0	0	junction_3	116.673333142868	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385281	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380630_61381331_61385160
ES.5096.39	chr11	-	3130	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	29	-7	intron_retention	FALSE	canonical	3	13	junction_4	92.8141811482611	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385063	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384349_61384781_61384905
ES.5096.40	chr11	-	2939	7	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-37	-7	intron_retention	FALSE	canonical	1	1	junction_4	81.7998913338045	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385051	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383731_61383896_61384472_61384781_61384905
ES.5096.41	chr11	-	3850	3	NIC	ENSMUSG00000001034.18	novel	3255	6	NA	NA	30	-7	intron_retention	FALSE	canonical	3	225	junction_1	14	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385062	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380324_61380674_61382513_61383729
ES.5096.42	chr11	-	3126	7	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	-27	-7	intron_retention	FALSE	canonical	3	13	junction_4	95.130903963375	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	False	NA	-6	True	AATACA	-12	NA	61385041	61379644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384331_61384781_61384905
ES.5096.48	chr11	-	3142	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	9	-8	intron_retention	FALSE	canonical	3	10	junction_5	99.8722795485425	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGACTCTGCGTCATT	NA	False	NA	-7	True	AATACA	-11	NA	61385083	61379645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61384012_61384472_61384781_61384905
ES.5096.49	chr11	-	3304	6	NNC	ENSMUSG00000001034.18	novel	3254	6	NA	NA	-2	-8	intron_retention	FALSE	canonical	2	3	junction_4	112.760986160995	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGACTCTGCGTCATT	NA	False	NA	-7	True	AATACA	-11	NA	61385094	61379645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61384012_61384349_61384760_61384905
ES.5096.5	chr11	-	3155	7	NNC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	-36	-1	intron_retention	FALSE	canonical	1	1	junction_5	86.6115209169978	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTCATTTTTGGGG	NA	False	NA	0	True	AATACA	-18	NA	61385050	61379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384263_61384781_61384905
ES.5096.6	chr11	-	2873	6	NNC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	152	-3	intron_retention	FALSE	canonical	0	0	junction_4	106.029052622383	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCGTCATTTTTGG	NA	False	NA	-2	True	AATACA	-16	NA	61384862	61379640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382455_61383729_61383896_61384422
ES.5096.7	chr11	-	3597	6	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	20	-3	intron_retention	FALSE	canonical	3	13	junction_4	84.907007955763	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCGTCATTTTTGG	NA	False	NA	-2	True	AATACA	-16	NA	61385072	61379640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61384781_61384905
ES.5096.8	chr11	-	3576	6	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	192	junction_5	22.1178660815188	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGCGTCATTTTTGG	NA	False	NA	-2	True	AATACA	-16	NA	61385105	61379640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384781_61384905
ES.5096.9	chr11	-	2966	7	NNC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	-37	-5	intron_retention	FALSE	canonical	1	1	junction_2	102.963450904786	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTCTGCGTCATTTTT	NA	False	NA	-4	True	AATACA	-14	NA	61385051	61379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61380097_61380189_61380324_61380630_61381331_61381433_61382513_61383729_61383896_61384472_61384760_61384905
ES.5097.1	chr11	+	815	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	0	2	0	-2	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGGCCTTCATTTCT	NA	False	NA	21	True	AATAAA	-21	NA	61395969	61403755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ES.5097.2	chr11	+	3637	6	NIC	ENSMUSG00000001039.13	novel	817	7	NA	NA	14	-5	intron_retention	FALSE	canonical	3	315	junction_4	20.8940182827526	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTGGGGCCTTCATT	NA	False	NA	18	True	AATAAA	-18	NA	61395983	61403752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61403266_61403477
ES.5097.3	chr11	+	658	6	NNC	ENSMUSG00000001039.13	novel	594	6	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	136.90668354759	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTCTGGGGCCTTCAT	NA	False	NA	17	True	AATAAA	-17	NA	61396002	61403751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61396098_61397169_61397239_61399905_61399995_61400295_61400359_61403197_61403266_61403477
ES.5097.4	chr11	+	8788	3	NNC	ENSMUSG00000001039.13	novel	890	3	NA	NA	-25	2594	intron_retention	FALSE	non_canonical	0	0	junction_2	178	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTAAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61396003	61406351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61397239_61398453_61401961_61402305
ES.5097.5	chr11	+	588	7	NNC	ENSMUSG00000001039.13	novel	817	7	NA	NA	-6	4020	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	127.20019217316	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	61396022	61407777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61407673
ES.5097.6	chr11	+	3560	6	ISM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	63	-2594	4	2594	intron_retention	FALSE	canonical	3	315	junction_4	20.49975609611	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCTAAAAAGAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61396032	61406351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197
ES.5098.1	chr11	+	3110	1	Intergenic	novelGene_4005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCCACACCTGTATGCTA	NA	False	NA	NA	False	AAGAAA	-1	NA	61450970	61454080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61451000_61454100
ES.5099.1	chr11	-	2649	11	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	18608	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	138.44276795846	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGTTGACTTTGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	61470512	61389466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61389975_61410312_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
ES.5099.10	chr11	-	4304	11	NNC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	145.000827583845	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470482	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425457_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.11	chr11	-	4416	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470549	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
ES.5099.12	chr11	-	5201	10	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	37	junction_8	132.88154940713	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470500	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.13	chr11	-	4371	12	NNC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	146.360926005396	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470494	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412482_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61444335_61444406_61456647_61456721_61470392
ES.5099.14	chr11	-	4143	8	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	114.362117318415	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470560	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61436975_61437738_61470392
ES.5099.15	chr11	-	3440	8	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470506	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
ES.5099.16	chr11	-	4257	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	124.448115025232	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470527	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61470392
ES.5099.18	chr11	-	4293	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	124.703302202656	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470528	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61470392
ES.5099.19	chr11	-	3988	7	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	115.743130345702	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470545	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.2	chr11	-	224	1	Intergenic	novelGene_4004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	61394128	61393904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61393900_61394100
ES.5099.20	chr11	-	4368	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	139.344866197278	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470495	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61456647_61456721_61470392
ES.5099.21	chr11	-	4373	11	NNC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	147.662622216998	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470499	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425330_61425440_61426096_61426210_61436975_61437738_61444335_61444406_61470392
ES.5099.22	chr11	-	5067	11	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	369	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	139.816343822888	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470115	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61456647_61456721_61469243
ES.5099.23	chr11	-	4078	8	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-371	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	114.230343729551	560	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61437739	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413865_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975
ES.5099.24	chr11	-	4457	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	145.712838847367	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470483	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61438833_61438869_61456647_61456721_61470392
ES.5099.25	chr11	-	14049	7	ISM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	33578	1	266	0	3prime_fragment	FALSE	canonical	3	259	junction_6	33.905505944217	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61436933	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096
ES.5099.27	chr11	-	4290	10	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	130.829830101718	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470512	61408075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61411886_61411970_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.29	chr11	-	4516	12	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.208952705502	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470506	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61448922_61449096_61456647_61456721_61470392
ES.5099.3	chr11	-	5115	5	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-369	1426	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	135.467708329328	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTGGGTTTTAGAGT	NA	False	NA	NA	False	ATTAAA	-31	NA	61437737	61406648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61436975
ES.5099.30	chr11	-	4409	11	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	142.678694975809	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470512	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61446294_61446428_61470392
ES.5099.31	chr11	-	4013	8	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	108.038164080843	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470494	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.32	chr11	-	4419	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	140.350418595742	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470518	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61434983_61435155_61436975_61437738_61470392
ES.5099.34	chr11	-	3801	6	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	123.292497744186	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61470506	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61436975_61437738_61470392
ES.5099.35	chr11	-	3477	1	NIC	ENSMUSG00000001036.18	novel	4287	10	NA	NA	23586	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGGTTTTGGCTGTGT	NA	False	NA	-2	True	TATAAA	-23	NA	61411553	61408076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61408100_61411600
ES.5099.36	chr11	-	4099	8	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	114.321422992815	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470493	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.37	chr11	-	4476	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	146.420598740536	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470469	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61444335_61444406_61456647_61456721_61470392
ES.5099.39	chr11	-	4284	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	133.772231797186	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470483	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61456647_61456721_61470392
ES.5099.4	chr11	-	5560	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	12	-1365	-3	1365	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGCTCTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	61470499	61406709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.40	chr11	-	3873	7	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	145.188096389936	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470506	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61436975_61437738_61456647_61456721_61470392
ES.5099.41	chr11	-	3472	9	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	3	14	junction_8	139.818576644879	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470505	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61470392
ES.5099.42	chr11	-	4434	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	145.442806628585	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470500	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61444335_61444406_61470392
ES.5099.43	chr11	-	4337	12	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	143.612771365132	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470500	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61438833_61438869_61456647_61456721_61470392
ES.5099.44	chr11	-	4407	13	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	144.460202131937	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470500	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61456647_61456721_61470392
ES.5099.45	chr11	-	4369	9	NNC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	107.198122651472	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470500	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413678_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.46	chr11	-	5140	9	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	58	junction_6	89.3874117255892	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470515	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.47	chr11	-	4310	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	133.765615910816	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470512	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61470392
ES.5099.48	chr11	-	5117	10	NNC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	279	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	129.075726648648	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470205	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61469243
ES.5099.49	chr11	-	5197	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	21	junction_9	138.254551417501	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470502	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61425440_61426096_61426210_61436975_61437738_61444335_61444406_61470392
ES.5099.5	chr11	-	4315	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-71	-1	-69	1	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTTTTGGCTGTGTCCT	NA	False	NA	1	True	TATAAA	-26	NA	61470582	61408073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.50	chr11	-	4760	9	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	47	junction_5	117.957619508025	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470495	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.51	chr11	-	4489	13	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	144.974399080972	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470481	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61434983_61435155_61436975_61437738_61438833_61438869_61456647_61456721_61470392
ES.5099.52	chr11	-	3637	9	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	138.888838194435	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470505	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61467948_61468150_61470392
ES.5099.53	chr11	-	4312	11	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	140.391452731283	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470497	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61456647_61456700_61470392
ES.5099.54	chr11	-	4296	10	NNC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	123.411686822782	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470512	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425348_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.55	chr11	-	4391	10	NIC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	133.634751893287	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470497	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61467948_61468150_61470392
ES.5099.56	chr11	-	4345	10	NNC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	133.634751893287	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470505	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438638_61438786_61470392
ES.5099.57	chr11	-	3523	9	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	151.900820850317	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470493	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424534_61426096_61426210_61456647_61456721_61470392
ES.5099.58	chr11	-	5032	9	NNC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	294	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	108.074554706462	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGGTTTTGGCTGTG	NA	False	NA	-3	True	TATAAA	-22	NA	61470190	61408077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61469243
ES.5099.6	chr11	-	5957	8	NNC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	-183	0	intron_retention	FALSE	non_canonical	0	0	junction_1	134.495732426038	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61437551	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61411084_61411911_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61425440_61426096_61426210_61436975
ES.5099.60	chr11	-	4298	11	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	141.853762727677	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTGGGTTTTGGCTGT	NA	False	NA	-4	True	TATAAA	-21	NA	61470500	61408078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61444335_61444406_61470392
ES.5099.62	chr11	-	4457	12	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	144.330314450643	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTGGGTTTTGGCTGT	NA	False	NA	-4	True	TATAAA	-21	NA	61470485	61408078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61434983_61435155_61436975_61437738_61456647_61456721_61470392
ES.5099.64	chr11	-	4328	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	134.892883429779	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTGGGTTTTGGCTGT	NA	False	NA	-4	True	TATAAA	-21	NA	61470493	61408078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61456647_61456721_61470392
ES.5099.65	chr11	-	4448	11	FSM	ENSMUSG00000001036.18	ENSMUST00000179936.8	4452	11	1	3	-1	-3	multi-exon	FALSE	canonical	3	20	junction_7	141.578246916679	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTGGGTTTTGGCTGT	NA	False	NA	-4	True	TATAAA	-21	NA	61470512	61408078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61456647_61456721_61470392
ES.5099.66	chr11	-	4472	12	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	146.06564809605	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTGGGTTTTGGCT	NA	False	NA	-6	True	TATAAA	-19	NA	61470504	61408080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61448922_61449096_61470392
ES.5099.68	chr11	-	5313	9	NNC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.940357631075	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTGGGTTTTGGCT	NA	False	NA	-6	True	TATAAA	-19	NA	61470500	61408080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61411084_61411911_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.69	chr11	-	4539	9	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	107.198122651472	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTGGGTTTTGGCT	NA	False	NA	-6	True	TATAAA	-19	NA	61470512	61408080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413656_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.7	chr11	-	4251	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-44	0	-42	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470555	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.70	chr11	-	5140	11	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	287	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	137.130776997726	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	False	NA	-7	True	TATAAA	-18	NA	61470197	61408081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61469243
ES.5099.71	chr11	-	5777	8	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	292	junction_2	24.0645390734235	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGATGTGGGTTTTGG	NA	False	NA	-8	True	TATAAA	-17	NA	61470500	61408082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61426210_61436975_61437738_61470392
ES.5099.73	chr11	-	3466	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-7	748	-5	-747	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACTTGCATTCTTCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	61470518	61408822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.74	chr11	-	3478	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	16	749	0	-748	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGACTTGCATTCTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	61470495	61408823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.75	chr11	-	3692	11	FSM	ENSMUSG00000001036.18	ENSMUST00000179936.8	4452	11	11	749	-6	-749	multi-exon	FALSE	canonical	3	20	junction_7	141.578246916679	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGACTTGCATTCTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	61470502	61408824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61456647_61456721_61470392
ES.5099.76	chr11	-	3564	11	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	-1	-749	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	141.853762727677	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGACTTGCATTCTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	61470512	61408824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61444335_61444406_61470392
ES.5099.77	chr11	-	3577	12	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	0	-754	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	143.585146219503	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCACAGACTTGCAT	NA	False	NA	NA	False	ATTAAA	-10	NA	61470495	61408829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61470392
ES.5099.78	chr11	-	3055	11	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-2	-1298	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	134.892883429779	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTAGTTGCCTTTTTCC	NA	False	NA	NA	False	ATTAAA	-37	NA	61470515	61409373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61456647_61456721_61470392
ES.5099.79	chr11	-	3290	13	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-32	-1299	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	145.458948007868	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTAGTTGCCTTTTTC	NA	False	NA	NA	False	ATTAAA	-36	NA	61470545	61409374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61438833_61438869_61444335_61444406_61456647_61456721_61470392
ES.5099.8	chr11	-	4310	11	FSM	ENSMUSG00000001036.18	ENSMUST00000178202.8	4317	11	8	-1	6	0	multi-exon	FALSE	canonical	3	37	junction_9	137.591569509182	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470505	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.80	chr11	-	2485	6	NIC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-1	-1300	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	123.292497744186	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTAGTTGCCTTTTT	NA	False	NA	NA	False	ATTAAA	-35	NA	61470489	61409375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61436975_61437738_61470392
ES.5099.81	chr11	-	2975	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-1	-1305	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCAGCCTCTAGTTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	61470512	61409380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.82	chr11	-	2905	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-4	1306	-2	-1305	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCAGCCTCTAGTTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	61470515	61409380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.83	chr11	-	2939	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	-2	1306	0	-1305	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCAGCCTCTAGTTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	61470513	61409380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ES.5099.84	chr11	-	3064	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	5	-1308	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCGCAGCCTCTAGTT	NA	False	NA	NA	False	ATTAAA	-27	NA	61470506	61409383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
ES.5099.86	chr11	-	2973	11	FSM	ENSMUSG00000001036.18	ENSMUST00000178202.8	4317	11	7	1337	5	-1337	multi-exon	FALSE	canonical	3	37	junction_9	137.591569509182	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAAACTTCC	NA	False	NA	NA	False	AAAAAG	-10	NA	61470506	61409412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.88	chr11	-	4512	8	NNC	ENSMUSG00000001036.18	novel	4207	9	NA	NA	-4	-1337	intron_retention	FALSE	non_canonical	0	0	junction_1	112.901618722692	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAAACTTCC	NA	False	NA	NA	False	AAAAAG	-10	NA	61470500	61409412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61411084_61411911_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.5099.89	chr11	-	3724	10	NNC	ENSMUSG00000001036.18	novel	4243	10	NA	NA	303	-1337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	138.204446874196	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAAACTTCC	NA	False	NA	NA	False	AAAAAG	-10	NA	61470181	61409412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61469243
ES.5099.9	chr11	-	4330	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470561	61408074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ES.5099.90	chr11	-	3340	14	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	-2	-1337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	150.2876925518	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACAAAAACTTCC	NA	False	NA	NA	False	AAAAAG	-10	NA	61470498	61409412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61444335_61444406_61446294_61446428_61448922_61449096_61456647_61456721_61470392
ES.5099.91	chr11	-	4251	15	NNC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	355	-1340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	145.84580899018	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAACAAAACAAAAACT	NA	False	NA	NA	False	AAAAAG	-7	NA	61470129	61409415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61434983_61435155_61436975_61437738_61438833_61438869_61444335_61444406_61446294_61446428_61448922_61449096_61469243
ES.5099.92	chr11	-	2786	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	-1	1422	-1	-1421	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCTTATGGAAA	NA	False	NA	NA	False	AAGAAA	-29	NA	61470512	61409496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ES.51.1	chr1	+	2863	4	NNC	ENSMUSG00000103067.2	novel	2596	3	NA	NA	-45901	-11146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTGATCCTTGAGTAT	NA	False	NA	NA	False	ATTAAA	-41	NA	7522290	7577227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_7522366_7568484_7568687_7570808_7570934_7574766
ES.510.1	chr1	+	2627	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	86	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.1274509627595	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACACCTGGCTTGCTCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	57813663	57986121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ES.510.10	chr1	+	973	3	NNC	ENSMUSG00000038305.16	novel	417	3	NA	NA	6	10619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAGAGATTATTAG	NA	False	NA	NA	False	AATAAA	-12	NA	57814025	57850216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57814184_57838466_57838514_57849448
ES.510.11	chr1	+	2566	15	NNC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.18015292268	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57814029	57986123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57814184_57838463_57838514_57868929_57869010_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ES.510.12	chr1	+	3829	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	13	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	20.5038952938758	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCACGTCTGTAGAACCG	NA	False	NA	NA	False	AATAAA	-15	NA	57814032	57987551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57814184_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ES.510.2	chr1	+	3973	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.1274509627595	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCTGTAGAACCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	57813749	57987553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ES.510.4	chr1	+	2139	13	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	0	-47	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	22.7978739262142	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATATATTGCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	57813902	57986076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ES.510.5	chr1	+	2456	15	NNC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.8083470153223	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57813916	57986123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_57813961_57838463_57838514_57868929_57869010_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ES.510.6	chr1	+	3965	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	-32	-4	-32	4	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGTAGAACCGTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	57813987	57987557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ES.510.7	chr1	+	2312	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	19.1485421551268	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTGCTCTTTCT	NA	False	NA	NA	False	ATTAAA	-15	NA	57813999	57986123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ES.510.8	chr1	+	2523	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	-19	1425	-19	4	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGCTCTTTCTATCGA	NA	False	NA	NA	False	ATTAAA	-20	NA	57814000	57986128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ES.5100.1	chr11	+	155	1	Intergenic	novelGene_4006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAGAAAAAAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	61473225	61473380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61473200_61473400
ES.5101.1	chr11	-	208	1	Intergenic	novelGene_4007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCTCTTCCAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	61474068	61473860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61473900_61474100
ES.5102.1	chr11	-	4526	1	Intergenic	novelGene_4008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAGCAGAACTTAACTA	8333	False	NA	NA	False	NA	NA	NA	61507162	61502636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61502600_61507200
ES.5103.1	chr11	+	1637	5	FSM	ENSMUSG00000004837.3	ENSMUST00000004959.3	1662	5	36	-11	36	11	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGACTTTGTTTAAAG	NA	False	NA	NA	False	AATAAA	-33	NA	61544126	61563621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61544251_61551047_61551146_61555010_61555134_61560661_61560831_61562498
ES.5104.1	chr11	-	1152	8	NNC	ENSMUSG00000042371.13	novel	1927	14	NA	NA	35926	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.728431359084683	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGACGTCCACTGGT	4826	False	NA	NA	False	TTTAAA	-20	NA	61574846	61563615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61563938_61564049_61564108_61564351_61564568_61564654_61564824_61566952_61567034_61567440_61567509_61569374_61569483_61574716
ES.5104.2	chr11	-	1071	7	NNC	ENSMUSG00000042371.13	novel	2049	15	NA	NA	40865	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.74535599249993	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATTGACGTCCACTG	9765	False	NA	NA	False	TTTAAA	-18	NA	61569907	61563617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61563938_61564049_61564108_61564351_61564568_61564654_61564824_61566952_61567104_61569374_61569483_61569858
ES.5105.1	chr11	+	3387	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	-348	1739	-20	-1739	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACAGTGTCCTGTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	61574896	61599038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ES.5105.2	chr11	+	3091	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-8	-1739	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.9293765408777	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACAGTGTCCTGTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	61574908	61599038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ES.5105.3	chr11	+	3155	5	NNC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-4	-1739	intron_retention	FALSE	canonical	1	3	junction_4	7.11951543294907	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACAGTGTCCTGTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	61574912	61599038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594328_61598190
ES.5105.4	chr11	+	4822	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	11	junction_1	3.9293765408777	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGTGTTGTCATTGAA	NA	False	NA	NA	False	AATAAA	-26	NA	61574914	61600775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ES.5105.5	chr11	+	4789	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	-15	4	-15	-4	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCAGTGTTGTCATTG	NA	False	NA	NA	False	AATAAA	-24	NA	61575229	61600773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ES.5105.6	chr11	+	1612	3	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	41	-1739	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACAGTGTCCTGTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	61575285	61599038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61575882_61585935_61586104_61598190
ES.5105.7	chr11	+	1714	5	NNC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	142	-1739	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.92678553567856	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACAGTGTCCTGTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	61575386	61599038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61575882_61585935_61586104_61592468_61592517_61594388_61594544_61598190
ES.5106.1	chr11	+	160	1	Intergenic	novelGene_4009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAATTTAAAAA	4685	False	NA	NA	False	NA	NA	NA	61622558	61622718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61622600_61622700
ES.5107.1	chr11	-	2716	2	ISM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	28525	-4	28525	0	3prime_fragment	FALSE	canonical	3	260	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	NA	False	NA	-3	True	AATAAA	-26	NA	61624313	61620475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61621129_61622250
ES.5107.11	chr11	-	1842	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	69.3977635574581	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	258	False	NA	-10	True	AATAAA	-19	NA	61652872	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646313_61647020_61647172_61647407_61647504_61652779
ES.5107.12	chr11	-	1886	12	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	85.8872025988036	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	232	False	NA	-10	True	AATAAA	-19	NA	61652898	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652305_61652401_61652779
ES.5107.13	chr11	-	1791	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-60	3	-10	-3	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	232	False	NA	-10	True	AATAAA	-19	NA	61652898	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
ES.5107.14	chr11	-	2316	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	12	-3	intron_retention	FALSE	non_canonical	0	0	junction_11	67.2388120897423	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	228	False	NA	-10	True	AATAAA	-19	NA	61652902	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652311
ES.5107.15	chr11	-	2392	13	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	6	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	91.9629680904221	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	270	False	NA	-10	True	AATAAA	-19	NA	61652860	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61633002_61633121_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652311
ES.5107.16	chr11	-	1799	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	80.0613401200491	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	270	False	NA	-10	True	AATAAA	-19	NA	61652860	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652311_61652401_61652779
ES.5107.17	chr11	-	3330	4	ISM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	22631	3	22631	-3	3prime_fragment	FALSE	canonical	3	214	junction_2	19.3620476419435	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	NA	False	NA	-10	True	AATAAA	-19	NA	61630207	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741
ES.5107.18	chr11	-	1756	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	65.5457697634584	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	241	False	NA	-10	True	AATAAA	-19	NA	61652889	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652858
ES.5107.19	chr11	-	5280	3	ISM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	22397	124	22397	-124	intron_retention	FALSE	canonical	3	214	junction_2	23	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTGGTTCCAACAC	NA	False	NA	-131	True	AATAAA	-33	NA	61630441	61620603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61621129_61622250_61622398_61625833
ES.5107.2	chr11	-	1887	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	89.4389306401278	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	232	False	NA	-3	True	AATAAA	-26	NA	61652898	61620475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652311_61652401_61652779
ES.5107.20	chr11	-	1693	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	4	-133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	80.0613401200491	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAAAGCTACTGTTGG	246	False	NA	NA	False	AATAAA	-24	NA	61652884	61620612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652311_61652401_61652779
ES.5107.21	chr11	-	1611	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-9	-134	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	65.5457697634584	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAAAAAGCTACTGTTG	255	False	NA	NA	False	AATAAA	-23	NA	61652875	61620613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652858
ES.5107.22	chr11	-	2148	12	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-5	-140	intron_retention	FALSE	non_canonical	0	0	junction_11	67.2388120897423	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCTAGAATCAAAAAGCTA	259	False	NA	NA	False	AATAAA	-17	NA	61652871	61620619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652311
ES.5107.23	chr11	-	1627	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-33	140	-5	-140	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCTAGAATCAAAAAGCTA	259	False	NA	NA	False	AATAAA	-17	NA	61652871	61620619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
ES.5107.24	chr11	-	1752	11	NNC	ENSMUSG00000020528.15	novel	1734	11	NA	NA	308	-142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	83.2456605475625	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACCTAGAATCAAAAAGC	600	False	NA	NA	False	AATAAA	-15	NA	61652530	61620621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652311
ES.5107.25	chr11	-	5068	1	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	3222	1687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTGTAGACATCCATA	3514	False	NA	NA	False	NA	NA	NA	61649616	61644548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61644500_61649600
ES.5107.26	chr11	-	2812	3	ISM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	-34	24069	-6	1687	5prime_fragment	FALSE	canonical	3	105	junction_2	27	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGTGTAGACATCCATA	258	False	NA	NA	False	NA	NA	NA	61652872	61644548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61647172_61647407_61647504_61652779
ES.5107.3	chr11	-	1851	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	-12	-2	-12	-2	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATGTGGATAGTTGTT	230	False	NA	-5	True	AATAAA	-24	NA	61652900	61620477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
ES.5107.4	chr11	-	1939	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	232	False	NA	-10	True	AATAAA	-19	NA	61652898	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
ES.5107.5	chr11	-	1652	9	NNC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	6569	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.7729897757205	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	6861	False	NA	-10	True	AATAAA	-19	NA	61646269	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61626098_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235
ES.5107.6	chr11	-	1709	10	NIC	ENSMUSG00000020528.15	novel	1771	11	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	77.5972508104078	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	218	False	NA	-10	True	AATAAA	-19	NA	61652912	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61652779
ES.5107.7	chr11	-	1750	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	14	7	-12	-3	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	230	False	NA	-10	True	AATAAA	-19	NA	61652900	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
ES.5107.8	chr11	-	2457	3	ISM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	25341	3	25341	-3	3prime_fragment	FALSE	canonical	3	214	junction_2	23	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	NA	False	NA	-10	True	AATAAA	-19	NA	61627497	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61621129_61622250_61622398_61625833
ES.5107.9	chr11	-	1933	13	NNC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	76.6932472038228	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	232	False	NA	-10	True	AATAAA	-19	NA	61652898	61620482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652311_61652401_61652779
ES.5108.1	chr11	-	576	1	Intergenic	novelGene_4010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTTCCAGAGGGCCAA	NA	False	NA	NA	False	NA	NA	NA	61655002	61654426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61654400_61655000
ES.5109.1	chr11	+	118	1	Intergenic	novelGene_4014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAACAAAAGAGA	7639	False	NA	NA	False	NA	NA	NA	61679845	61679963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61679800_61680000
ES.511.1	chr1	+	125	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57993366	57993491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_57993400_57993500
ES.5110.1	chr11	+	117	1	Intergenic	novelGene_4015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61682678	61682795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61682700_61682800
ES.5111.1	chr11	+	318	1	Intergenic	novelGene_4016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAAAAGCCCTAACTC	NA	False	NA	NA	False	AGTAAA	-13	NA	61715097	61715415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61715100_61715400
ES.5112.1	chr11	+	218	1	Intergenic	novelGene_4017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATTATCCAGTGACT	NA	False	NA	NA	False	AAAAAG	-20	NA	61726344	61726562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61726300_61726600
ES.5113.1	chr11	+	4235	2	Antisense	novelGene_ENSMUSG00000004798.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	61738954	61743227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_61738965_61739002
ES.5114.1	chr11	-	5762	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-18	-1	-18	1	multi-exon	TRUE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCATATCATGTAT	NA	False	NA	NA	False	AATAAA	-23	NA	61745917	61666473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.10	chr11	-	4154	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	73	1516	73	337	multi-exon	FALSE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGCAATTTAAAACTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	61745826	61667990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.11	chr11	-	3906	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-14	1851	-14	2	multi-exon	FALSE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAAGTACAGTTATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	61745913	61668325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.12	chr11	-	4156	26	NNC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	-18	1	intron_retention	FALSE	canonical	0	0	junction_7	5.88204046228858	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATAAGTACAGTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	61745917	61668326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689892_61689993_61690285_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.13	chr11	-	4791	26	ISM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-19	2805	-19	-952	5prime_fragment	FALSE	canonical	3	9	junction_7	4.44630183410888	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGTTCTCATTGCAT	NA	False	NA	NA	False	AATATA	-16	NA	61745918	61669279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.14	chr11	-	178	1	Intergenic	novelGene_4011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61670210	61670032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61670000_61670200
ES.5114.15	chr11	-	363	1	Intergenic	novelGene_4012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61675896	61675533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61675500_61675900
ES.5114.16	chr11	-	177	1	Intergenic	novelGene_4013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGACAGTGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	61676183	61676006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61676000_61676200
ES.5114.17	chr11	-	224	1	Intergenic	novelGene_4018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATCTGGATAATAATA	NA	False	NA	NA	False	NA	NA	NA	61728937	61728713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61728700_61728900
ES.5114.2	chr11	-	5618	26	NIC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	5.75277324427098	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTCATATCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	61745913	61666475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.3	chr11	-	5419	25	NIC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	46	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.48988969733353	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTCATATCATGT	NA	False	NA	NA	False	AATAAA	-21	NA	61745853	61666475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61668666_61670499_61670636_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.4	chr11	-	5198	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-9	554	-9	-554	multi-exon	FALSE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTGGGTTAATATGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	61745908	61667028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.5	chr11	-	4620	24	NIC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	-14	-555	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	5.81504469471321	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTGGGTTAATATGAA	NA	False	NA	NA	False	AATAAA	-20	NA	61745913	61667029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.6	chr11	-	5410	27	NNC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	-237	-556	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5.36424719126497	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTGGGTTAATATGA	NA	False	NA	NA	False	AATAAA	-19	NA	61746136	61667030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672944_61674369_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.7	chr11	-	5307	26	NIC	ENSMUSG00000004798.15	novel	5743	27	NA	NA	-261	-559	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	5.75277324427098	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTATAGTTGGGTTAATA	NA	False	NA	NA	False	AATAAA	-16	NA	61746160	61667033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.8	chr11	-	4866	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	56	821	56	-821	multi-exon	FALSE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACATGGTTTTCATTT	NA	False	NA	NA	False	ATTAAA	-9	NA	61745843	61667295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5114.9	chr11	-	4583	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	-233	1393	-233	460	multi-exon	FALSE	canonical	3	9	junction_8	4.53666848543571	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTCATGTGAACCTTTGCA	NA	False	NA	NA	False	TTTAAA	-14	NA	61746132	61667867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ES.5115.1	chr11	-	1092	1	Genic_Genomic	ENSMUSG00000072847.5	novel	NA	NA	NA	NA	1634	24	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGCACTAACCACACAG	5600	False	NA	NA	False	AGTAAA	-19	NA	61756461	61755369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_61755400_61756500
ES.5115.10	chr11	-	3464	15	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	42.91311820744	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821042	61762497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807084_61813607_61813656_61820814
ES.5115.11	chr11	-	4227	5	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-16897	-4	intron_retention	FALSE	canonical	3	123	junction_3	26.4054918530218	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGTCAACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	61786173	61762501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61763848_61768132_61768853_61777525_61777609_61781063_61781174_61784205
ES.5115.12	chr11	-	2835	13	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.0279957079264	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGTCAACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	61821040	61762501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806007_61820814
ES.5115.13	chr11	-	3509	15	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	223	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.0057542424172	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGTCAACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	61820810	61762501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820542
ES.5115.14	chr11	-	3271	13	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	44.4669040473424	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTGTCAACTTCCTG	NA	False	NA	NA	False	NA	NA	NA	61821053	61762501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.15	chr11	-	4172	14	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	2	-5	intron_retention	FALSE	canonical	1	1	junction_8	43.9814377198532	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGTGTCAACTTCCT	NA	False	NA	NA	False	NA	NA	NA	61821031	61762502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794761_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.16	chr11	-	3362	14	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	44.2234776598512	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATGGTGTCAACTTCC	NA	False	NA	NA	False	NA	NA	NA	61821061	61762503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.17	chr11	-	5724	3	FSM	ENSMUSG00000047804.16	ENSMUST00000137323.2	1923	3	-3808	7	-3808	-7	multi-exon	FALSE	canonical	3	149	junction_2	16	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGGTGTCAACTTC	NA	False	NA	NA	False	NA	NA	NA	61773084	61762504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61763848_61768132_61768229_61768799
ES.5115.18	chr11	-	3596	16	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-8	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	54.3399178014346	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGGTGTCAACTTC	NA	False	NA	NA	False	NA	NA	NA	61821041	61762504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61784684_61784816_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.2	chr11	-	4449	1	Genic_Genomic	ENSMUSG00000072847.5	novel	NA	NA	NA	NA	-1594	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGCTATTTGATTTC	1583	False	NA	NA	False	NA	NA	NA	61760478	61756029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_61756000_61760500
ES.5115.22	chr11	-	2722	13	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	45.8109036026238	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATGGTGTCAACTT	NA	False	NA	NA	False	NA	NA	NA	61821040	61762505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61813607_61813656_61820814
ES.5115.23	chr11	-	8544	14	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	7	-9	intron_retention	FALSE	canonical	3	123	junction_4	18.6112519252428	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAATGGTGTCAACT	NA	False	NA	NA	False	NA	NA	NA	61821045	61762506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.24	chr11	-	1427	8	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	-7	-11262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.44525428617	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCAATC	NA	False	NA	NA	False	NA	NA	NA	61821040	61793864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61793969_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.3	chr11	-	6036	16	Fusion	ENSMUSG00000072847.5_ENSMUSG00000047804.16	novel	3874	15	NA	NA	2	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	41.5750993851956	203	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCTGGCTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	61821031	61756031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_61757049_61760940_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.4	chr11	-	6012	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	38	-2176	-7	2176	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACACAGAAGGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	61821040	61759956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.5	chr11	-	4008	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	26	-160	0	160	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCTTGTACTTACTTAA	NA	False	NA	NA	False	NA	NA	NA	61821052	61761972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.6	chr11	-	3846	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	17	11	-9	-11	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTAGTGATTTCTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	61821061	61762143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5115.7	chr11	-	3548	15	NNC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	211	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.0057542424172	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTGTCCTCTGCCTT	NA	False	NA	NA	False	CATAAA	-20	NA	61820822	61762227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820789
ES.5115.8	chr11	-	3574	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	-56	356	-56	9	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTTTCAGGGCATT	NA	False	NA	NA	False	NA	NA	NA	61821134	61762488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ES.5116.1	chr11	+	181	1	Intergenic	novelGene_4019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGCCTGCATTGATG	NA	False	NA	NA	False	NA	NA	NA	61831445	61831626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_61831400_61831600
ES.5117.1	chr11	+	4094	8	FSM	ENSMUSG00000042331.14	ENSMUST00000202178.4	2932	8	34	-1196	-2	1196	multi-exon	FALSE	canonical	0	0	junction_1	11.4374965149989	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTGGTTTGAATTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	61847638	62030545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61847716_61920078_61920249_61933768_61933902_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
ES.5117.10	chr11	+	4001	13	Fusion	ENSMUSG00000042331.14_ENSMUSG00000018500.3	novel	6676	13	NA	NA	-3	-347	multi-exon	FALSE	canonical	0	0	junction_10	9.41740410091868	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAATACTTGTTCCTGG	NA	False	NA	NA	False	AATAAA	-13	NA	61967913	62156932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62155887
ES.5117.11	chr11	+	175	1	Intergenic	novelGene_4022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62051844	62052019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62051800_62052000
ES.5117.12	chr11	+	159	1	Intergenic	novelGene_4023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAAATTTTGGGGCT	NA	False	NA	NA	False	NA	NA	NA	62094547	62094706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62094500_62094700
ES.5117.13	chr11	+	1537	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	-38	346	-38	-346	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATACTTGTTCCTGGG	8685	False	NA	NA	False	AATAAA	-14	NA	62139771	62156933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62140263_62155887
ES.5117.14	chr11	+	1837	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	8	0	8	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCACTGGCTTCTTGCA	8731	False	NA	NA	False	AATAAA	-20	NA	62139817	62157279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62140263_62155887
ES.5117.2	chr11	+	3948	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	5	1197	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGGTTTGAATTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	61967829	62030546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
ES.5117.3	chr11	+	5956	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	7	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATATTTTATTTATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61967831	62032556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
ES.5117.4	chr11	+	3682	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-82	3076	16	-27	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGCTTTTGCCTCTTAGC	NA	False	NA	NA	False	AATAAA	-29	NA	61967840	62110763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
ES.5117.5	chr11	+	4306	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-50	2420	2	-536	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAGGATGCCCCTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	61967872	62111419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
ES.5117.6	chr11	+	3959	6	NNC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	11	1194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4880884817015	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTGTGGTTTGAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	61967895	62030543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_61968143_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
ES.5117.7	chr11	+	3201	5	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	-21	5078	11	-4627	5prime_fragment	FALSE	canonical	3	12	junction_2	7.39509972887452	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTAGTGGGTTCTCAA	NA	False	NA	NA	False	TATAAA	-18	NA	61967895	62024270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101
ES.5117.8	chr11	+	1618	4	ISM	ENSMUSG00000042331.14	ENSMUST00000202744.4	674	5	12	4639	12	-4626	5prime_fragment	FALSE	canonical	0	0	junction_1	13.1402688962847	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAGTGGGTTCTCAAT	NA	False	NA	NA	False	TATAAA	-19	NA	61967896	62024271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_61968063_62019025_62019234_62022655_62022730_62023101
ES.5117.9	chr11	+	2663	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	13	-19	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAATTCTGAAAAACAAAA	NA	False	NA	NA	False	AATAAA	-2	NA	61967897	62029329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
ES.5118.1	chr11	-	170	1	Intergenic	novelGene_4020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAAATAAATGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	61892325	61892155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_61892200_61892300
ES.5119.1	chr11	-	155	1	Intergenic	novelGene_4021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	62001473	62001318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62001300_62001500
ES.512.1	chr1	+	4745	9	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	-10677	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.741711952838	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	NA	False	NA	15	True	ATTAAA	-19	NA	58024452	58065058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58024601_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.10	chr1	+	6679	8	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_7	85.7461845405689	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATCTATTTATTT	5181	False	NA	14	True	ATTAAA	-18	NA	58035171	58065057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.11	chr1	+	8039	8	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	43	-6	intron_retention	TRUE	canonical	0	0	junction_6	103.112183804726	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTATTTATCTATCTAT	5182	False	NA	8	True	ATTAAA	-12	NA	58035172	58065051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042080_58042139_58052665_58054181_58054223_58058902_58063942
ES.512.13	chr1	+	3764	7	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	44	-876	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	115.32803456036	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGTCATCACATAACT	5183	False	NA	14	True	AATAAA	-14	NA	58035173	58064181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58035472_58037254_58037381_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.14	chr1	+	4957	9	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.741711952838	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATCTATCTATTTAT	5185	False	NA	12	True	ATTAAA	-16	NA	58035175	58065055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035539_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.16	chr1	+	5273	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	50	-384	50	384	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTCTAGACATACTTC	5189	False	NA	NA	False	AATAAA	-17	NA	58035179	58065442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.18	chr1	+	3663	6	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	60	-875	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	120.973385502763	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGTCATCACATAACTT	5199	False	NA	15	True	AATAAA	-15	NA	58035189	58064182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58035472_58037254_58037381_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.19	chr1	+	4874	9	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	61	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	80.2616813928041	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTATCTATTTATT	5200	False	NA	13	True	ATTAAA	-17	NA	58035190	58065056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058906_58063948
ES.512.2	chr1	+	3919	2	Antisense	novelGene_ENSMUSG00000054770.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGACCTACCTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	58024486	58031305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_58024601_58027500
ES.512.21	chr1	+	4660	10	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	74	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	97.4236009634799	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTATCTATTTATT	5213	False	NA	13	True	ATTAAA	-17	NA	58035203	58065056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58054991_58055193_58057143_58058747_58058902_58063942
ES.512.23	chr1	+	4991	10	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	110.30138286408	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCTATCTATTTATTT	5220	False	NA	14	True	ATTAAA	-18	NA	58035210	58065057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035472_58035746_58035881_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.24	chr1	+	4962	10	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	97.2259681818026	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	5223	False	NA	15	True	ATTAAA	-19	NA	58035213	58065058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58061659_58061767_58063942
ES.512.25	chr1	+	4720	9	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	651	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.741711952838	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTTTAAAGATTT	5790	False	NA	-6	True	AATACA	-5	NA	58035780	58065037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58035925_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.26	chr1	+	4883	6	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	4656	3	4656	-2	3prime_fragment	FALSE	canonical	0	0	junction_5	101.164025226362	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATCTATCTATTTAT	9795	False	NA	12	True	ATTAAA	-16	NA	58039785	58065055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.27	chr1	+	6125	5	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	4825	-189	intron_retention	FALSE	canonical	0	0	junction_4	111.920730876813	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCAAGTGATTTATT	9964	False	NA	NA	False	AATACA	-42	NA	58039954	58064868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.28	chr1	+	6573	4	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	15092	2	-11653	-1	3prime_fragment	FALSE	canonical	0	0	junction_3	125.461813579538	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTATCTATTTATT	NA	False	NA	13	True	ATTAAA	-17	NA	58050221	58065056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.29	chr1	+	3951	3	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	-9183	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	105.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	NA	False	NA	15	True	ATTAAA	-19	NA	58052691	58065058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58052902_58054517_58057143_58063942
ES.512.3	chr1	+	4173	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	-3	769	-3	-768	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGGCTATCTTGTCTT	5136	False	NA	122	True	AATAAA	-27	NA	58035126	58064289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.30	chr1	+	7395	36	Fusion	ENSMUSG00000063558.5_ENSMUSG00000026039.10	novel	4939	9	NA	NA	-7049	5	intron_retention	TRUE	non_canonical	0	0	junction_2	49.6670876117851	316	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAAGGTGGTTTCATT	NA	False	NA	NA	False	ATTAAA	-23	NA	58054825	58145577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_58057143_58058747_58058902_58063942_58064012_58080594_58080653_58082710_58082798_58086293_58086403_58088521_58088649_58092822_58092885_58093806_58093897_58095372_58095454_58096572_58096718_58097290_58097384_58098193_58098346_58098537_58098632_58100354_58100465_58101290_58101476_58102530_58102694_58104432_58104526_58107428_58107599_58107890_58108006_58109239_58109323_58112336_58112434_58115222_58115348_58116601_58116736_58117584_58117673_58120661_58120749_58121170_58121363_58124592_58124821_58131652_58131749_58133579_58134389_58136118_58136172_58137024_58137140_58141743_58141810_58143477_58143667_58144123_58144292_58145186
ES.512.31	chr1	+	7051	1	FSM	ENSMUSG00000026039.10	ENSMUST00000190746.2	3183	1	-3872	4	-3872	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATCTATCTATTT	NA	False	NA	10	True	ATTAAA	-14	NA	58058002	58065053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58058000_58065100
ES.512.32	chr1	+	4298	34	NIC	ENSMUSG00000063558.5	novel	4423	35	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.07137391088871	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGTTTGCTCTAAGGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	58069124	58145569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58069218_58080594_58080653_58082700_58082798_58086293_58086403_58088521_58088649_58092822_58092885_58093806_58093897_58095372_58095454_58096572_58096718_58097290_58097384_58098193_58098346_58098537_58098632_58100354_58100465_58101290_58101476_58102530_58102694_58104432_58104526_58107428_58107599_58107890_58108006_58109199_58109323_58112336_58112434_58115222_58115348_58116601_58116736_58117584_58117673_58121170_58121363_58124592_58124821_58131652_58131749_58133579_58133709_58134313_58134389_58136118_58136172_58137024_58137140_58141743_58141810_58143477_58143667_58144123_58144292_58145186
ES.512.33	chr1	+	3692	23	NNC	ENSMUSG00000063558.5	novel	4423	35	NA	NA	41	8757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.05234880934457	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACACAGTGTTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	58069163	58118795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58069218_58080594_58080653_58082700_58082798_58086293_58086403_58088521_58088649_58092822_58092885_58093806_58093897_58095372_58095454_58096572_58096718_58097290_58097384_58098193_58098350_58098537_58098632_58100354_58100465_58101290_58101476_58102530_58102694_58104432_58104526_58107428_58107599_58107890_58108006_58109199_58109323_58112336_58112434_58115222_58115348_58116601_58116736_58117584
ES.512.34	chr1	+	176	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATATTCCTACCCC	NA	False	NA	NA	False	NA	NA	NA	58077550	58077726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58077600_58077700
ES.512.35	chr1	+	2964	4	ISM	ENSMUSG00000063558.5	ENSMUST00000160168.2	6429	15	24715	10069	24715	-10069	internal_fragment	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTGTATAGCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	58093837	58099969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58093897_58095372_58095454_58096572_58096718_58097290
ES.512.36	chr1	+	6317	10	NIC	ENSMUSG00000063558.5	novel	4423	35	NA	NA	28269	8759	intron_retention	FALSE	canonical	0	0	junction_1	1.36986977843755	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACAGTGTTTCAAGTACA	NA	False	NA	NA	False	NA	NA	NA	58097391	58118797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58101476_58102530_58102694_58104432_58104526_58107428_58107599_58107890_58108006_58109199_58109323_58112336_58112434_58115222_58115348_58116601_58116736_58117584
ES.512.4	chr1	+	4944	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	0	-5	0	5	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTATTTATTTATTTAT	5139	False	NA	20	True	ATTAAA	-24	NA	58035129	58065063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.5	chr1	+	4050	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	15	874	15	-873	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCATCACATAACTTGT	5154	False	NA	17	True	AATAAA	-17	NA	58035144	58064184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.7	chr1	+	3869	8	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	20	-873	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	108.472135046899	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCATCACATAACTTGT	5159	False	NA	17	True	AATAAA	-17	NA	58035149	58064184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58035472_58037254_58037381_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.8	chr1	+	4741	8	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	108.472135046899	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTATCTATTTATT	5159	False	NA	13	True	ATTAAA	-17	NA	58035149	58065056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58035472_58037254_58037381_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ES.512.9	chr1	+	4211	4	NIC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	24	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	140.949951716518	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTATCTATTTATT	5163	False	NA	13	True	ATTAAA	-17	NA	58035153	58065056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58035472_58054517_58057143_58058747_58058902_58063942
ES.5120.1	chr11	-	6912	3	ISM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	1240	0	1240	0	intron_retention	TRUE	canonical	3	253	junction_2	54	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62170961	62158049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62158433_62159529_62159635_62164537
ES.5120.11	chr11	-	977	5	NNC	ENSMUSG00000014243.6	novel	732	5	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.159542814304	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGCAATCAGATCAAGTT	NA	False	NA	-23	True	AATAAA	-17	NA	62172193	62158057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62158433_62159529_62159896_62164537_62164641_62167443_62167466_62172082
ES.5120.12	chr11	-	5144	1	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	2667	-6341	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTATTTATTTTGAAT	NA	False	NA	NA	False	AGTAAA	-23	NA	62169534	62164390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62164400_62169500
ES.5120.13	chr11	-	739	1	Genic_Genomic	ENSMUSG00000014243.6	novel	NA	NA	NA	NA	-7	-13420	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62172208	62171469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_62171500_62172200
ES.5120.2	chr11	-	5373	4	ISM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	-26	2	-26	-2	intron_retention	FALSE	canonical	3	222	junction_3	59.5781466273965	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172227	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443
ES.5120.3	chr11	-	636	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172232	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62158433_62159529_62159635_62172082
ES.5120.4	chr11	-	751	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	-21	2	-21	-2	multi-exon	FALSE	canonical	3	218	junction_4	57.8986182909402	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172222	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ES.5120.5	chr11	-	819	5	NNC	ENSMUSG00000014243.6	novel	732	5	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	130.836491469314	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172208	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167548_62172082
ES.5120.6	chr11	-	2889	2	ISM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	10164	2	10164	-2	3prime_fragment	FALSE	canonical	3	361	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62162037	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62158433_62159529
ES.5120.7	chr11	-	722	4	NNC	ENSMUSG00000014243.6	novel	732	5	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	151.28853962618	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172193	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62158433_62159529_62159635_62164537_62164641_62172060
ES.5120.8	chr11	-	691	4	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	149.035417118065	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGATCAAGTTATTGAA	NA	False	NA	-17	True	AATAAA	-23	NA	62172184	62158051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62158433_62159529_62159635_62164537_62164641_62172082
ES.5120.9	chr11	-	741	4	NNC	ENSMUSG00000014243.6	novel	732	5	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	151.28853962618	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATCAGATCAAGTTATTG	NA	False	NA	-19	True	AATAAA	-21	NA	62172208	62158053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62158433_62159529_62159635_62164537_62164641_62172054
ES.5121.1	chr11	+	3544	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-51	-83	-40	83	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTGTGGTGTAGATAG	NA	False	NA	97	True	TATAAA	-11	NA	62172258	62207335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.10	chr11	+	4179	8	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	-215	intron_retention	FALSE	canonical	3	154	junction_2	25.1217443824334	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACTGCCTCAGAGTATA	NA	False	NA	NA	False	NA	NA	NA	62172276	62205857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.11	chr11	+	931	7	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	9192	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	64.3205945937138	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	62172276	62182606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182291
ES.5121.12	chr11	+	3880	8	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	4	intron_retention	FALSE	canonical	2	6	junction_5	64.9857127155105	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	20	True	AATAAA	-16	NA	62172276	62206076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62199867_62200020_62203841_62204005_62204835
ES.5121.13	chr11	+	1935	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-33	1508	-22	-328	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGTGCTCAGGGTAAT	NA	False	NA	NA	False	AGTAAA	-15	NA	62172276	62205744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.14	chr11	+	5587	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-33	-2144	-22	2144	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTAGTGGAGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	62172276	62209396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.15	chr11	+	3002	11	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-22	-15	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_10	58.5965869313222	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAAAGTTTAAGATCT	NA	False	NA	-1	True	NA	NA	NA	62172276	62207237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835_62206277_62206702
ES.5121.16	chr11	+	5848	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-32	-2406	-21	2406	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGTTTGACTGTGTT	NA	False	NA	NA	False	AAAAAG	-22	NA	62172277	62209658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.17	chr11	+	2213	12	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-18	486	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	81.1647645734555	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTGCTGATTCCTTTT	NA	False	NA	NA	False	AATATA	-35	NA	62172280	62219763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62206702_62206771_62210596_62210680_62218723
ES.5121.18	chr11	+	3599	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-11	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.1316015042945	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGGATTCTAATAATCT	NA	False	NA	21	True	AATAAA	-17	NA	62172287	62206077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62173076_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182953_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.19	chr11	+	1790	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-21	1641	-10	-461	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGTTTGTATGTATA	NA	False	NA	NA	False	ACTAAA	-24	NA	62172288	62205611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.2	chr11	+	2166	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-27	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	66.9541587580637	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTATGGATTCTAATAA	NA	False	NA	18	True	AATAAA	-14	NA	62172271	62206074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.20	chr11	+	1225	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-1	-1013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	61.2126429287364	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGTGTGTAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	62172297	62205059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176653_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.21	chr11	+	4413	8	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	0	559	intron_retention	FALSE	canonical	2	6	junction_5	64.9857127155105	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTGGAAAATTGTCAGAA	NA	False	NA	NA	False	TATAAA	-15	NA	62172298	62206631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62199867_62200020_62203841_62204005_62204835
ES.5121.22	chr11	+	4101	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	12	junction_7	76.2874680257366	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTATGGATTCTAATAA	NA	False	NA	18	True	AATAAA	-14	NA	62172299	62206074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62185027_62185179_62199867_62200020_62203841_62204005_62204835
ES.5121.23	chr11	+	4170	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_6	86.9980842700957	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTATGGATTCTAAT	NA	False	NA	16	True	AATAAA	-12	NA	62172300	62206072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182291_62182524_62182825_62182912_62199867_62200020_62203841_62204005_62204835
ES.5121.24	chr11	+	1503	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	2	-10	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	78.6097958272377	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTTAAGATCTCAAAT	NA	False	NA	4	True	NA	NA	NA	62172300	62207242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62206702
ES.5121.25	chr11	+	3378	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	-7	-1178	2	-2	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCAAATGTCTGTCT	NA	False	NA	12	True	NA	NA	NA	62172300	62207250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.26	chr11	+	1730	12	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-3	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	81.1647645734555	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAGAAGAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	62172304	62219304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62206702_62206771_62210596_62210680_62218723
ES.5121.27	chr11	+	1574	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-4	1840	-2	-660	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATGCTTACTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	62172305	62205412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.28	chr11	+	3173	8	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	2	-668	intron_retention	FALSE	canonical	2	6	junction_5	64.9857127155105	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGATTCATGCTTA	NA	False	NA	NA	False	NA	NA	NA	62172311	62205404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62199867_62200020_62203841_62204005_62204835
ES.5121.29	chr11	+	2076	11	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	2	463	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	73.1830581487273	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGTGTGCTACTCTG	NA	False	NA	NA	False	AATATA	-12	NA	62172311	62219740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62206702_62206771_62218723
ES.5121.3	chr11	+	3977	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-24	4	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGATTCTAATAATC	NA	False	NA	20	True	AATAAA	-16	NA	62172274	62206076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.30	chr11	+	3221	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	2	187	2	-187	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTTCATTATGTTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	62172311	62207065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.31	chr11	+	8270	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	2	5112	intron_retention	FALSE	non_canonical	0	0	junction_9	78.7510532949352	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATATTTCATTTTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62172311	62212364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835_62211420_62211630
ES.5121.32	chr11	+	4859	10	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	4	-406	intron_retention	FALSE	canonical	3	12	junction_7	76.2874680257366	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTGTTGTCGTGAACA	NA	False	NA	NA	False	AAGAAA	-15	NA	62172313	62206846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62185027_62185179_62199867_62200020_62203841_62204005_62204835
ES.5121.34	chr11	+	2138	6	ISM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	3540	-391	1348	391	3prime_fragment	FALSE	canonical	3	175	junction_3	16.9068033643264	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGACTCATCTCCTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	62175847	62206463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.35	chr11	+	5229	4	NNC	ENSMUSG00000042298.19	novel	961	4	NA	NA	10588	2406	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	88.9356821279038	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGTTTGACTGTGTT	NA	False	NA	NA	False	AAAAAG	-22	NA	62185087	62209658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62185179_62199867_62200020_62203841_62204005_62204835
ES.5121.36	chr11	+	6481	5	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-3547	5112	intron_retention	FALSE	canonical	1	1	junction_4	99.3035120224859	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATATTTCATTTTTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62196320	62212364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62200020_62203841_62204005_62204835_62206771_62210596_62210680_62211763
ES.5121.37	chr11	+	3128	3	ISM	ENSMUSG00000042298.19	ENSMUST00000154976.2	961	4	-2259	12021	-2259	4	5prime_fragment	FALSE	canonical	3	14	junction_2	95.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTCTGTCTTTCTTA	NA	False	NA	18	True	NA	NA	NA	62197608	62207256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62200020_62203841_62204005_62206702
ES.5121.38	chr11	+	2735	3	ISM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	26377	0	-1183	0	3prime_fragment	FALSE	canonical	3	196	junction_2	4.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTATGGATTCTAAT	NA	False	NA	16	True	AATAAA	-12	NA	62198684	62206072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62200020_62203841_62204005_62204835
ES.5121.39	chr11	+	3326	1	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	4056	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATCTCAAATGTCTGTC	NA	False	NA	11	True	NA	NA	NA	62203923	62207249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62203900_62207200
ES.5121.4	chr11	+	2280	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	1164	-23	16	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATCTTGGAATCATAG	NA	False	NA	32	True	AATAAA	-28	NA	62172275	62206088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.40	chr11	+	3983	2	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATATTTCATTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	62208168	62212363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62211420_62211631
ES.5121.41	chr11	+	5092	1	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACGTTGTTGTTTTGTT	NA	False	NA	NA	False	GATAAA	-27	NA	62211837	62216929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62211800_62216900
ES.5121.42	chr11	+	2567	1	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAGACCTGGCTTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	62214888	62217455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62214900_62217500
ES.5121.43	chr11	+	1648	1	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTATCTGGTTGGTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62215071	62216719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62215100_62216700
ES.5121.44	chr11	+	2557	2	Genic_Genomic	ENSMUSG00000042298.19	novel	828	8	NA	NA	15371	-7	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62215238	62219270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62216458_62217932
ES.5121.45	chr11	+	4070	1	Genic_Genomic	ENSMUSG00000042298.19	novel	NA	NA	NA	NA	15371	31	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAAGAGCTGGCC	NA	False	NA	NA	False	NA	NA	NA	62215238	62219308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62215200_62219300
ES.5121.46	chr11	+	1083	1	Genic_Genomic	ENSMUSG00000042298.19	novel	NA	NA	NA	NA	18931	604	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTTTTCCCATTATTG	NA	False	NA	NA	False	NA	NA	NA	62218798	62219881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62218800_62219900
ES.5121.5	chr11	+	1192	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	-32	1033	-23	-1033	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGTTGTCTGGACCTC	NA	False	NA	NA	False	NA	NA	NA	62172275	62205039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.6	chr11	+	2099	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-34	1345	-23	-165	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGCAGTCTGGCAAAT	NA	False	NA	NA	False	TATAAA	-27	NA	62172275	62205907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.7	chr11	+	5152	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	0	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAAATGTCTGTCTTT	NA	False	NA	14	True	NA	NA	NA	62172275	62207252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5121.8	chr11	+	3576	11	NNC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	73.7172978343618	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAAAGTTTAAGATCT	NA	False	NA	-1	True	NA	NA	NA	62172275	62207237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62185027_62185175_62199867_62200020_62203841_62204005_62204835
ES.5121.9	chr11	+	3759	9	NIC	ENSMUSG00000042298.19	novel	3410	10	NA	NA	-23	-213	intron_retention	FALSE	canonical	3	154	junction_3	25.45308183698	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGCCTCAGAGTATATA	NA	False	NA	NA	False	NA	NA	NA	62172275	62205859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62172520_62172610_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ES.5122.1	chr11	+	267	1	Intergenic	novelGene_4025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACACAATTAAAATTCTG	NA	False	NA	NA	False	AATATA	-42	NA	62268246	62268513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62268200_62268500
ES.5122.2	chr11	+	158	1	Intergenic	novelGene_4026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	62268248	62268406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62268200_62268400
ES.5123.1	chr11	+	177	1	Intergenic	novelGene_4027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATGTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62301381	62301558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62301400_62301600
ES.5124.1	chr11	+	1249	1	Intergenic	novelGene_4028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCTACAAAAACTTAG	NA	False	NA	NA	False	NA	NA	NA	62305919	62307168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62305900_62307200
ES.5125.1	chr11	+	165	1	Intergenic	novelGene_4029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAACCTAAAATA	NA	False	NA	NA	False	NA	NA	NA	62308668	62308833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62308700_62308800
ES.5126.1	chr11	+	894	1	Intergenic	novelGene_4030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAATATATGGCTGAAG	NA	False	NA	NA	False	NA	NA	NA	62323231	62324125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62323200_62324100
ES.5126.2	chr11	+	2667	1	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	62323233	62325900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62323200_62325900
ES.5126.3	chr11	+	158	1	Intergenic	novelGene_4031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAACCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	62324139	62324297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62324100_62324300
ES.5127.1	chr11	+	5947	2	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTCATGAATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62329177	62338482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62330736_62334093
ES.5128.1	chr11	+	3436	3	Antisense	novelGene_ENSMUSG00000018501.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	62341629	62345485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62342591_62342803_62345060_62345266
ES.5129.1	chr11	+	4230	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-1042	1623	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGAGAATTATTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	62348243	62406866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405717_62406325
ES.5129.100	chr11	+	4296	1	Intergenic	novelGene_4044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62543024	62547320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62543000_62547300
ES.5129.11	chr11	+	3201	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-23	1612	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62349262	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405746_62406353
ES.5129.12	chr11	+	3381	9	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-21	1636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	111.921777929945	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTTTGTATT	NA	False	NA	28	True	ATTAAA	-36	NA	62349264	62406879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62399951_62400026_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.13	chr11	+	3240	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-21	1637	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.906571570957	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCCTGTTTGTATTT	NA	False	NA	29	True	ATTAAA	-37	NA	62349264	62406880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.14	chr11	+	1665	6	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-15	-512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	100.300348952534	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGCCCACACCTTTA	NA	False	NA	26	True	AATAAA	-30	NA	62349270	62404731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62402943_62403098_62403729
ES.5129.15	chr11	+	3399	9	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-14	1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.498263875493	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62349271	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62399135_62399335_62400645_62400678_62402963_62403098_62403729_62405717_62406325
ES.5129.16	chr11	+	3195	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-13	1619	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATTTGAGAATTATT	NA	False	NA	11	True	ATTAAA	-19	NA	62349272	62406862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405775_62406385
ES.5129.17	chr11	+	2500	6	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-13	1618	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	80.9088375889803	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGATTTGAGAATTAT	NA	False	NA	10	True	ATTAAA	-18	NA	62349272	62406861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62399306_62404944_62405717_62406325
ES.5129.18	chr11	+	1744	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-11	-515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.179231920657	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCTGGGCCCACACCT	NA	False	NA	23	True	AATAAA	-27	NA	62349274	62404728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62399951_62400026_62400645_62400678_62402963_62403098_62403729
ES.5129.19	chr11	+	3539	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-11	1878	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGATATTTTAGTGGT	NA	False	NA	NA	False	NA	NA	NA	62349274	62407121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.2	chr11	+	2020	1	Genic_Genomic	ENSMUSG00000014245.9	novel	NA	NA	NA	NA	-1040	-52799	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGACCTTTTTTCCCA	NA	False	NA	12	True	NA	NA	NA	62348245	62350265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62348200_62350300
ES.5129.21	chr11	+	4760	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	2	1619	intron_retention	FALSE	non_canonical	0	0	junction_7	106.597277600494	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATTTGAGAATTATT	NA	False	NA	11	True	ATTAAA	-19	NA	62349287	62406862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62400199_62400645_62400678_62402963_62403098_62403729_62405717_62406325
ES.5129.22	chr11	+	3449	9	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	9	1613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.498263875493	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTATAATGATTTGAGA	NA	False	NA	5	True	ATTAAA	-13	NA	62349294	62406856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62399139_62399335_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.23	chr11	+	3252	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	11	1612	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62349296	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405984_62406506
ES.5129.24	chr11	+	4746	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	12	1616	intron_retention	TRUE	non_canonical	0	0	junction_1	118.800982611205	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATAATGATTTGAGAATT	NA	False	NA	8	True	ATTAAA	-16	NA	62349297	62406859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349513_62364186_62364295_62394504_62394596_62398552_62400199_62400645_62400678_62402963_62403098_62403729_62405730_62406339
ES.5129.25	chr11	+	3242	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	20	1612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.995653729628	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62349305	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349513_62364186_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.26	chr11	+	3159	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	23	1618	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGATTTGAGAATTAT	NA	False	NA	10	True	ATTAAA	-18	NA	62349308	62406861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405759_62406368
ES.5129.27	chr11	+	3147	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	28	1612	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62349313	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405738_62406348
ES.5129.28	chr11	+	3134	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	47	1622	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTGAGAATTATTTTG	NA	False	NA	14	True	ATTAAA	-22	NA	62349332	62406865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405817_62406431
ES.5129.3	chr11	+	3387	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-101	1636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTTTGTATT	NA	False	NA	28	True	ATTAAA	-36	NA	62349184	62406879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.30	chr11	+	1743	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-6	-520	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	90.9810725126691	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGAGCTGGGCCCA	NA	False	NA	18	True	AATAAA	-22	NA	62349427	62404723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402732_62403098_62403729
ES.5129.31	chr11	+	3165	9	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	32	1612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.585523048037	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62349465	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62355115_62355199_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.32	chr11	+	215	1	Intergenic	novelGene_4035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAACTTCA	NA	False	NA	NA	False	NA	NA	NA	62358353	62358568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62358400_62358600
ES.5129.33	chr11	+	3201	2	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	13212	-36532	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTCACACTAGCAAAGAC	NA	False	NA	NA	False	NA	NA	NA	62362645	62366532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62364976_62365661
ES.5129.34	chr11	+	5272	6	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	14824	1634	intron_retention	FALSE	non_canonical	0	0	junction_5	100.27282782489	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTGCCTGTTTGTA	NA	False	NA	26	True	ATTAAA	-34	NA	62364257	62406877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62364295_62394504_62394596_62398552_62398621_62400645_62403098_62403729_62405978_62406501
ES.5129.35	chr11	+	2890	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	34954	1618	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	116.599028011958	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGATTTGAGAATTAT	NA	False	NA	10	True	ATTAAA	-18	NA	62384387	62406861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62384430_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405717_62406325
ES.5129.36	chr11	+	3012	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	37982	1621	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	116.174676911776	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62387415	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62387578_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405788_62406397
ES.5129.37	chr11	+	3008	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	44789	1621	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	116.174676911776	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62394222	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62394298_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405991_62406517
ES.5129.38	chr11	+	214	1	Intergenic	novelGene_4037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62394224	62394438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62394200_62394400
ES.5129.39	chr11	+	3123	6	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	44880	1617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	104.814884439186	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAATGATTTGAGAATTA	NA	False	NA	9	True	ATTAAA	-17	NA	62394313	62406860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.4	chr11	+	3268	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-71	1634	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTGCCTGTTTGTA	NA	False	NA	26	True	ATTAAA	-34	NA	62349214	62406877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405767_62406377
ES.5129.40	chr11	+	4082	4	ISM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	46413	520	46265	-520	3prime_fragment	FALSE	canonical	3	159	junction_1	64.1058153021671	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGAGCTGGGCCCA	NA	False	NA	18	True	AATAAA	-22	NA	62395698	62404723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62398621_62400645_62400678_62402963_62403098_62403729
ES.5129.41	chr11	+	2032	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	49149	1619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATTTGAGAATTATT	NA	False	NA	11	True	ATTAAA	-19	NA	62398582	62406862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62399214_62404852_62405717_62406325
ES.5129.42	chr11	+	4677	2	Genic_Genomic	ENSMUSG00000014245.9	novel	2174	7	NA	NA	49222	363	multi-exon	FALSE	non_canonical	0	0	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATACACCATCATCAGTG	NA	False	NA	NA	False	NA	NA	NA	62398655	62403427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62399024_62399118
ES.5129.43	chr11	+	4309	5	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	50498	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.573302567963	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACACTTCAAAGACTGAT	NA	False	NA	NA	False	NA	NA	NA	62399931	62408302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62400026_62400645_62400678_62402963_62403098_62403729_62405978_62406501
ES.5129.44	chr11	+	2884	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	50507	157464	intron_retention	FALSE	canonical	0	0	junction_1	0	5920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAACAAAAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	62399940	62562707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62400026_62400645_62403279_62562541
ES.5129.45	chr11	+	3328	4	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	50659	1617	intron_retention	TRUE	non_canonical	0	0	junction_3	134.673267164976	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAATGATTTGAGAATTA	NA	False	NA	9	True	ATTAAA	-17	NA	62400092	62406860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62400678_62402963_62403098_62403729_62405978_62406499
ES.5129.46	chr11	+	4338	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	51852	1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	158	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62401285	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62403098_62403729_62405717_62406325
ES.5129.47	chr11	+	1254	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53082	-514	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	112	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGGGCCCACACCTT	NA	False	NA	24	True	AATAAA	-28	NA	62402515	62404729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402636_62402963_62403098_62403729
ES.5129.48	chr11	+	2780	4	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53082	1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	132.705187037533	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62402515	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402636_62402963_62403098_62403729_62405717_62406325
ES.5129.5	chr11	+	2195	6	NIC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-34	55	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.238776123632	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCTTAGCCTGCTTT	NA	False	NA	NA	False	CATAAA	-43	NA	62349251	62405298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62349521_62364194_62364295_62394504_62394596_62400645_62400678_62402963_62403098_62403729
ES.5129.50	chr11	+	2877	4	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	1636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	132.705187037533	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCCTGTTTGTATT	NA	False	NA	28	True	ATTAAA	-36	NA	62402518	62406879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402636_62402963_62403098_62403729_62405978_62406501
ES.5129.51	chr11	+	4628	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	3059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	158	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACACTTCAAAGACTGAT	NA	False	NA	NA	False	NA	NA	NA	62402518	62408302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62403098_62403729_62405978_62406501
ES.5129.52	chr11	+	2968	4	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	1621	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	144.269038797503	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGAGAATTATTTT	NA	False	NA	13	True	ATTAAA	-21	NA	62402518	62406864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402827_62402963_62403098_62403729_62405717_62406325
ES.5129.53	chr11	+	3100	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	1620	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	158	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATTTGAGAATTATTT	NA	False	NA	12	True	ATTAAA	-20	NA	62402518	62406863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62403098_62403729_62405862_62406474
ES.5129.54	chr11	+	1431	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53093	-517	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	147.5	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAGCTGGGCCCACAC	NA	False	NA	21	True	AATAAA	-25	NA	62402526	62404726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402827_62402963_62403098_62403729
ES.5129.55	chr11	+	3106	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53098	1615	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATAATGATTTGAGAAT	NA	False	NA	7	True	ATTAAA	-15	NA	62402531	62406858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62403098_62403794_62405978_62406501
ES.5129.57	chr11	+	2888	4	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53242	1613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	144.269038797503	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTATAATGATTTGAGA	NA	False	NA	5	True	ATTAAA	-13	NA	62402675	62406856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62402827_62402963_62403098_62403729_62405978_62406501
ES.5129.59	chr11	+	1803	2	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	55037	1612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTATAATGATTTGAG	NA	False	NA	4	True	ATTAAA	-12	NA	62404470	62406855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62405920_62406501
ES.5129.6	chr11	+	1624	7	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-30	-515	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	67.1656327463847	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCTGGGCCCACACCT	NA	False	NA	23	True	AATAAA	-27	NA	62349255	62404728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403794
ES.5129.60	chr11	+	159	1	Intergenic	novelGene_4039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62410190	62410349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62410200_62410300
ES.5129.61	chr11	+	4285	1	Antisense	novelGene_ENSMUSG00000018509.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAACAGTTTAATAACAC	NA	False	NA	NA	False	NA	NA	NA	62423823	62428108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_62423800_62428100
ES.5129.62	chr11	+	2212	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	-619	-94	-619	94	multi-exon	FALSE	canonical	3	35417	junction_1	0	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATGCATCATTTACA	NA	False	NA	119	True	ACTAAA	-14	NA	62441377	62444133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62442422_62442965
ES.5129.63	chr11	+	1042	4	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-175	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16695.733912856	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442326	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62442965_62443124_62443192_62443312_62443368
ES.5129.64	chr11	+	2130	1	Genic_Genomic	ENSMUSG00000019505.8	novel	NA	NA	NA	NA	-172	420	mono-exon	FALSE	NA	NA	NA	NA	NA	5148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAAGGTTTGTGTCCCT	NA	False	NA	NA	False	ATTAAA	-24	NA	62442329	62444459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_62442300_62444500
ES.5129.65	chr11	+	1159	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	333	7	-172	-7	multi-exon	FALSE	canonical	3	35417	junction_1	0	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATATGGTGTCACTT	NA	False	NA	18	True	AATAAA	-17	NA	62442329	62444032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62442422_62442965
ES.5129.66	chr11	+	1709	1	NIC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-172	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442329	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62442300_62444000
ES.5129.67	chr11	+	1130	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-172	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATATGGTGTCACTT	NA	False	NA	18	True	AATAAA	-17	NA	62442329	62444032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442393_62442965
ES.5129.69	chr11	+	704	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62443424
ES.5129.7	chr11	+	3192	6	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-29	1613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	118.132129414482	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTATAATGATTTGAGA	NA	False	NA	5	True	ATTAAA	-13	NA	62349256	62406856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62402963_62403098_62403729_62405978_62406501
ES.5129.71	chr11	+	478	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62443650
ES.5129.72	chr11	+	934	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	canonical	1	107	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62443194
ES.5129.73	chr11	+	1193	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	canonical	2	331	junction_1	0	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62442935
ES.5129.74	chr11	+	2984	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	335	-1820	-170	1820	multi-exon	FALSE	canonical	3	35417	junction_1	0	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCATGGCTCTTTGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	62442331	62445859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62442422_62442965
ES.5129.75	chr11	+	1151	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-1	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442331	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62442977
ES.5129.76	chr11	+	1139	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-170	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATATGGTGTCACTT	NA	False	NA	18	True	AATAAA	-17	NA	62442331	62444032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62442422_62442983
ES.5129.78	chr11	+	1196	2	FSM	ENSMUSG00000019505.8	ENSMUST00000136938.2	890	2	53	-359	53	-1	multi-exon	FALSE	canonical	3	711	junction_1	0	5148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCACTTGTGAAA	NA	False	NA	24	True	AATAAA	-23	NA	62442554	62444038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62442678_62442965
ES.5129.79	chr11	+	2914	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1363	5	-224	-5	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGAACGTTGCCTCTG	8104	False	NA	NA	False	NA	NA	NA	62466726	62491336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ES.5129.8	chr11	+	1686	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	-26	514	-26	-514	multi-exon	FALSE	canonical	3	156	junction_1	58.9736287580211	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGGGCCCACACCTT	NA	False	NA	24	True	AATAAA	-28	NA	62349259	62404729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
ES.5129.80	chr11	+	3063	1	NIC	ENSMUSG00000018507.17	novel	3671	14	NA	NA	12225	-3745	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTAGGGAGCCGGGCAGT	NA	False	NA	NA	False	AAAAAG	-4	NA	62484317	62487380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62484300_62487400
ES.5129.81	chr11	+	1006	3	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-41	1	intron_retention	FALSE	canonical	3	3662	junction_1	536.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGTGTTTTGGATGA	NA	False	NA	NA	False	AATAAA	-19	NA	62493661	62495634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62493850_62494060_62494473_62495228
ES.5129.82	chr11	+	484	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	-21	-1	-21	1	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGTGTTTTGGATGA	NA	False	NA	NA	False	AATAAA	-19	NA	62493681	62495634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ES.5129.83	chr11	+	1741	2	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	3941	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATTGCCAGTGTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	62493701	62495630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62495293_62495480
ES.5129.84	chr11	+	1722	2	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	-1	-1	-1	1	intron_retention	FALSE	canonical	3	3662	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGTGTTTTGGATGA	NA	False	NA	NA	False	AATAAA	-19	NA	62493701	62495634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62493850_62494060
ES.5129.85	chr11	+	414	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	410	junction_2	1602.82063874908	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGTGTTTTGGATGA	NA	False	NA	NA	False	AATAAA	-19	NA	62493701	62495634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62493850_62494060_62494109_62495228_62495293_62495480
ES.5129.86	chr11	+	1174	2	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	4735	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCCAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	62493702	62495632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62494473_62495228
ES.5129.87	chr11	+	471	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1867.01606849004	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCCAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	62493702	62495632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62493860_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ES.5129.88	chr11	+	408	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	25	junction_1	2058.84519951247	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGATTGCCAGTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	62493702	62495627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62493850_62494422_62494473_62495228_62495293_62495480
ES.5129.89	chr11	+	775	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3662	junction_1	454.557904879993	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCCAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	62493702	62495632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62493850_62494060_62494473_62495228_62495293_62495480
ES.5129.9	chr11	+	3205	8	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	-24	1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	89.1320964201162	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGATTTGAGAATTAT	NA	False	NA	10	True	ATTAAA	-18	NA	62349261	62406861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729_62405717_62406327
ES.5129.91	chr11	+	1930	1	FSM	ENSMUSG00000064437.4	ENSMUST00000082503.4	72	1	-202	-1656	-202	1656	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCCAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-17	NA	62493702	62495632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62493700_62495600
ES.5129.92	chr11	+	474	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	1875.82042050938	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAGTGTTTTGGATGA	NA	False	NA	NA	False	AATAAA	-19	NA	62493702	62495634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495469
ES.5129.94	chr11	+	917	2	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	7	87622	intron_retention	FALSE	non_canonical	0	0	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	62493709	62583255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62494591_62583219
ES.5129.95	chr11	+	5480	1	Intergenic	novelGene_4041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGGTCTCACTATGTAG	NA	False	NA	NA	False	NA	NA	NA	62502514	62507994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62502500_62508000
ES.5129.96	chr11	+	233	1	Intergenic	novelGene_4043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	929	False	NA	NA	False	NA	NA	NA	62513352	62513585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62513400_62513600
ES.5129.97	chr11	+	2315	2	FSM	ENSMUSG00000048497.12	ENSMUST00000062860.5	343	2	-478	-1494	-478	-1	multi-exon	FALSE	canonical	3	15	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGTCTGTGTCTGGT	NA	False	NA	1	True	NA	NA	NA	62539011	62557179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62539643_62555495
ES.5129.98	chr11	+	1886	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	-179	-1118	-8	0	multi-exon	FALSE	canonical	3	16	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	False	NA	2	True	NA	NA	NA	62539481	62557180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62539683_62555495
ES.5129.99	chr11	+	1419	4	NNC	ENSMUSG00000048497.12	novel	2736	3	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.35412613473634	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTCTGTGTCTGGTTT	NA	False	NA	3	True	NA	NA	NA	62539503	62557181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62539643_62540272_62540375_62555495_62556062_62556569
ES.513.1	chr1	-	2439	6	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	31.4299220489011	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTGGTTTAACTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	58009318	57994261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58009179
ES.513.10	chr1	-	5421	1	NIC	ENSMUSG00000054770.17	novel	2114	4	NA	NA	1429	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	57999832	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57994400_57999800
ES.513.11	chr1	-	6696	6	NNC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	22.8875512014719	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009247	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_58001155_58002226_58002421_58002913_58004700_58006655_58006883_58009179
ES.513.12	chr1	-	2542	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	-35	5	-35	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009322	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
ES.513.13	chr1	-	3396	6	NNC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	2156	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.4299220489011	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58006527	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58005281
ES.513.14	chr1	-	6894	3	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-2093	0	intron_retention	FALSE	canonical	3	56	junction_2	3	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58004699	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_58001155_58002226
ES.513.15	chr1	-	2749	7	NNC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-19755	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	29.1228241914978	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58029042	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58028670
ES.513.16	chr1	-	2516	7	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	22.3737197026631	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009318	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
ES.513.17	chr1	-	2930	7	NNC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.3231366387354	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009210	57994416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006764_58006883_58008565
ES.513.18	chr1	-	5059	6	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	0	-5	intron_retention	FALSE	canonical	3	12	junction_3	18.6333035181634	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009211	57994416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58009179
ES.513.19	chr1	-	2318	6	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-32	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	28.2134719593318	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009319	57994416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58004509_58004700_58006655_58006883_58009179
ES.513.2	chr1	-	3192	7	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.1859749331515	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTGGTTTAACTGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	58009208	57994261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58008565
ES.513.20	chr1	-	2495	7	NNC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	-19484	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	25.1859749331515	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58028771	57994416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58028670
ES.513.22	chr1	-	3018	7	FSM	ENSMUSG00000054770.17	ENSMUST00000161608.8	2495	7	-528	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_6	29.1228241914978	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	False	NA	-9	True	AATAAA	-15	NA	58009211	57994416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58008565
ES.513.23	chr1	-	2299	7	NNC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	25.617376914899	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGTGACTTTTCTG	NA	False	NA	-11	True	AATAAA	-13	NA	58009195	57994418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006764_58006883_58009179
ES.513.24	chr1	-	4731	5	NIC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	2	-12	intron_retention	FALSE	canonical	0	0	junction_4	30.6950728945217	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGTGTCACCTGCCA	NA	False	NA	NA	False	ATTAAA	-18	NA	58009209	57995862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58004700_58006655_58006883_58008565
ES.513.25	chr1	-	166	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAGGAAGTTGCATG	NA	False	NA	NA	False	NA	NA	NA	58024187	58024021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58024000_58024200
ES.513.3	chr1	-	3272	8	NNC	ENSMUSG00000054770.17	novel	2495	7	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.8018167739756	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGTGGTTTAACTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	58009185	57994262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58005281_58005408_58006655_58006883_58008565
ES.513.4	chr1	-	2588	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	49	-125	0	-22	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTACTGGTATGTTTCTC	NA	False	NA	NA	False	AATAAA	-1	NA	58009238	57994281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
ES.513.6	chr1	-	3110	7	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	25.1859749331515	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTTCTGTGACTACTT	NA	False	NA	-2	True	AATAAA	-22	NA	58009274	57994409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58008565
ES.513.8	chr1	-	6486	5	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_4	17.4553000547112	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009243	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58006883_58009179
ES.513.9	chr1	-	4498	6	NIC	ENSMUSG00000054770.17	novel	2512	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_5	15.6511980372111	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58009211	57994411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58004700_58006655_58006883_58009179
ES.5130.1	chr11	-	3378	3	Antisense	novelGene_ENSMUSG00000042298.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTGCACCTTCTGCCA	NA	False	NA	NA	False	AAAAAG	-4	NA	62185490	62175110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62175884_62176647_62176712_62182949
ES.5130.2	chr11	-	1371	4	Antisense	novelGene_ENSMUSG00000042298.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62185490	62175134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62175884_62176647_62176712_62182949_62183043_62185025
ES.5131.1	chr11	-	3398	1	Antisense	novelGene_ENSMUSG00000042298.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGGACTTAAAGTTTT	4302	False	NA	NA	False	NA	NA	NA	62200868	62197470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62197500_62200900
ES.5132.1	chr11	-	10463	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	1764	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	107.684224745042	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAAAATCCTCCTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	62348147	62205487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.100	chr11	-	8750	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	119.036272722354	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTGTGACGTAAAG	NA	False	NA	-6	True	AATAAA	-29	NA	62348149	62207820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294602_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.101	chr11	-	8645	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-306	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	102.096973806727	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348147	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.102	chr11	-	8501	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-306	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	114.323534452235	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348143	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301641_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.104	chr11	-	8387	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-40	-306	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	104.416519508715	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348198	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.105	chr11	-	8465	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-306	combination_of_known_junctions	FALSE	canonical	3	136	junction_28	94.3605381137639	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348150	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.106	chr11	-	8144	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-306	combination_of_known_splicesites	FALSE	canonical	0	0	junction_43	102.260605342227	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348147	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62329163_62329342_62347973
ES.5132.109	chr11	-	11397	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-306	intron_retention	FALSE	canonical	3	74	junction_4	99.2062091210341	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCATTTGTGACGTAAA	NA	False	NA	-7	True	AATAAA	-28	NA	62348149	62207821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.110	chr11	-	8368	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-307	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	104.268239577059	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATCATTTGTGACGTAA	NA	False	NA	-8	True	AATAAA	-27	NA	62348147	62207822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.111	chr11	-	8512	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-313	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	101.773770115653	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348150	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.113	chr11	-	8472	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	-313	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	98.1347914959143	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348137	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.115	chr11	-	8755	49	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	129.295189754878	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348152	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229682_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.117	chr11	-	8140	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-313	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_28	110.384717583377	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348147	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264278_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.118	chr11	-	8577	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-228	-313	combination_of_known_junctions	FALSE	canonical	3	20	junction_46	101.871014946354	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348386	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.120	chr11	-	8212	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	28	-313	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	114.314048692167	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348121	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62347973
ES.5132.123	chr11	-	7998	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-313	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	113.49337938603	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348143	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.125	chr11	-	8440	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	122	-313	combination_of_known_junctions	FALSE	canonical	3	20	junction_46	115.142816308478	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348510	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.126	chr11	-	8600	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-11	-313	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	113.785654598437	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348169	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.127	chr11	-	8534	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	129.674220066797	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348143	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62248593_62248695_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.128	chr11	-	8653	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-313	combination_of_known_junctions	FALSE	canonical	3	133	junction_28	90.00684547177	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAGTACATCATTTGTG	NA	False	NA	-14	True	AATAAA	-21	NA	62348147	62207828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.133	chr11	-	8473	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	113.555706123447	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348147	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.134	chr11	-	8180	45	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-139	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	131.411148611291	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62349506	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62257789_62257986_62260119_62260250_62263901_62264278_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.135	chr11	-	2868	14	NNC	ENSMUSG00000018501.18	novel	4215	23	NA	NA	5930	-314	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	143.645849844382	767	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62229797	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684
ES.5132.136	chr11	-	8176	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-314	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	110.25791088888	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348154	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.14	chr11	-	8727	38	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-3138	789	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.855207971949	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGCCTTTTTTATAA	NA	False	NA	-3	True	AGTAAA	-19	NA	62289156	62206462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208864_62210212_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090
ES.5132.145	chr11	-	8178	44	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-314	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	124.138018759203	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348150	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.146	chr11	-	5330	4	ISM	ENSMUSG00000018501.18	ENSMUST00000156740.9	4215	23	33720	-793	-4074	-314	3prime_fragment	FALSE	canonical	3	429	junction_3	22.69116323349	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62216121	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217
ES.5132.148	chr11	-	8416	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-314	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_35	114.356885076769	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348156	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264278_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283395_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.15	chr11	-	9998	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	5	789	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_23	106.40085381741	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGCCTTTTTTATAA	NA	False	NA	-3	True	AGTAAA	-19	NA	62348144	62206462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245479_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.150	chr11	-	8314	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-314	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	104.674224780188	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348148	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.151	chr11	-	8395	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.2336620067	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348148	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210252_62211821_62212038_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236159_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.152	chr11	-	8563	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-314	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	116.667551531436	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348147	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280617_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.155	chr11	-	8328	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-314	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	116.009846325407	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348147	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.156	chr11	-	8735	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	-314	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_39	123.98712312117	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62349370	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294106_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.157	chr11	-	8494	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	-314	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	119.696710303445	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348137	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236146_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.158	chr11	-	7802	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-314	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_26	125.313997720492	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348143	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264278_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.159	chr11	-	8403	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	14	-314	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	115.183571738715	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348135	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.16	chr11	-	6859	26	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-3842	789	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	99.0394345702761	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGCCTTTTTTATAA	NA	False	NA	-3	True	AGTAAA	-19	NA	62263969	62206462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901
ES.5132.163	chr11	-	8265	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-11	-314	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	130.962533388952	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348169	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240221_62240312_62242199_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260248_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.164	chr11	-	8450	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-314	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	110.108043261727	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGTACATCATTTGT	NA	False	NA	-15	True	AATAAA	-20	NA	62348149	62207829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.166	chr11	-	8179	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_17	117.155134040719	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348149	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.169	chr11	-	8462	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	11	-315	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	98.5623812905871	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348138	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.170	chr11	-	8575	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-315	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	107.11636385925	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348143	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.171	chr11	-	8398	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-315	combination_of_known_junctions	FALSE	canonical	3	70	junction_16	105.996076540436	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348148	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62233957_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.172	chr11	-	8370	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	122.832089118448	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348149	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324486_62329163_62329342_62347973
ES.5132.173	chr11	-	8673	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	-315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	132.033656216606	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348151	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236146_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301641_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.174	chr11	-	7786	45	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_23	119.52669227118	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348149	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.175	chr11	-	8669	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	-315	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	100.000258034977	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348153	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.176	chr11	-	8366	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-315	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	104.627148480617	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348147	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.177	chr11	-	8387	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	-315	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	106.27722829024	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348153	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.179	chr11	-	8598	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	121.007394391873	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348148	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257859_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.18	chr11	-	9938	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	7	788	combination_of_known_junctions	FALSE	canonical	3	28	junction_28	113.936406498967	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACTGCCTTTTTTATA	NA	False	NA	-4	True	AGTAAA	-18	NA	62348142	62206463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.180	chr11	-	8589	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.731119313528	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348149	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225477_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.181	chr11	-	8634	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-315	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	106.853423633245	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348148	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.184	chr11	-	5877	8	ISM	ENSMUSG00000018501.18	ENSMUST00000156740.9	4215	23	25138	-792	-2934	-315	intron_retention	FALSE	canonical	3	154	junction_6	106.284562205738	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62224703	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801
ES.5132.185	chr11	-	7908	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-315	at_least_one_novel_splicesite	TRUE	canonical	3	68	junction_9	108.982852364727	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348147	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62233957_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.186	chr11	-	7746	44	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-18109	-315	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	109.091503759626	942	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62310485	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423
ES.5132.187	chr11	-	8630	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-315	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_23	109.354751828153	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348147	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245479_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.188	chr11	-	6043	29	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	1858	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.965722552654	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62267485	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212038_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460
ES.5132.189	chr11	-	8335	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-315	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	113.323058357757	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348143	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.19	chr11	-	9840	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	11	787	combination_of_known_junctions	FALSE	canonical	3	136	junction_28	89.8546081797492	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACTGCCTTTTTTAT	NA	False	NA	-5	True	AGTAAA	-17	NA	62348138	62206464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.191	chr11	-	8722	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	123	-315	combination_of_known_junctions	FALSE	canonical	3	20	junction_47	101.830565209394	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348509	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.195	chr11	-	8501	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	112.75672660682	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348149	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301641_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.196	chr11	-	7982	41	NNC	ENSMUSG00000018501.18	novel	7243	45	NA	NA	-9383	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	117.761132700904	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62301759	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62246047_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645
ES.5132.197	chr11	-	8573	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-315	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_28	112.036796885366	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348147	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.198	chr11	-	8717	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	-315	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_47	114.081610491884	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348151	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.199	chr11	-	8628	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	102.650518834603	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348154	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275666_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.2	chr11	-	4999	14	ISM	ENSMUSG00000018501.18	ENSMUST00000155712.9	6328	28	39640	-1434	6024	1170	3prime_fragment	FALSE	canonical	3	274	junction_6	59.8183641233236	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATTGCGTAGTCTCTAG	NA	False	NA	NA	False	NA	NA	NA	62229703	62206081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684
ES.5132.200	chr11	-	8112	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	8	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.072811320814	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348141	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.201	chr11	-	8519	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	123	-315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	124.990205139104	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348509	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310419_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.202	chr11	-	7960	45	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	13	-315	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	124.242448263117	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62349354	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.203	chr11	-	6255	30	NIC	ENSMUSG00000018501.18	novel	7243	45	NA	NA	-89	-315	combination_of_known_junctions	FALSE	canonical	3	87	junction_21	98.921112229436	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62269432	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322
ES.5132.206	chr11	-	8333	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-315	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	106.416628237471	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTACAGTACATCATTTG	NA	False	NA	-16	True	AATAAA	-19	NA	62348147	62207830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.208	chr11	-	8339	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-316	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	100.368162075491	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348145	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.210	chr11	-	8329	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	9	-316	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	111.276410376022	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348140	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.212	chr11	-	8479	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-7	-316	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_23	108.223688172952	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348165	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245479_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.213	chr11	-	8102	45	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	8368	-316	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_44	115.366976454262	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62320939	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62320851
ES.5132.217	chr11	-	7463	42	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-18100	-316	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	112.626598739396	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62310476	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423
ES.5132.218	chr11	-	8555	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	9	-316	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	130.160067906794	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348140	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62248593_62248695_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.22	chr11	-	9368	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	787	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	114.431032712447	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACTGCCTTTTTTAT	NA	False	NA	-5	True	AGTAAA	-17	NA	62348143	62206464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.224	chr11	-	8499	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-316	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	108.606450027861	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348149	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.225	chr11	-	6331	32	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	42	-316	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	118.758764395339	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	5753	False	NA	-17	True	AATAAA	-18	NA	62275627	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543
ES.5132.226	chr11	-	8475	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-316	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_27	118.233254848139	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348149	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.227	chr11	-	8615	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	-316	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_46	107.407728304776	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348152	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324486_62329163_62329342_62347973
ES.5132.23	chr11	-	9872	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	787	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	100.934021899566	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACTGCCTTTTTTAT	NA	False	NA	-5	True	AGTAAA	-17	NA	62348152	62206464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.230	chr11	-	8395	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-316	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	108.415198989352	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348147	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.232	chr11	-	7977	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	-316	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	124.042723903892	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348155	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228542_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.233	chr11	-	8485	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-316	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	102.646015238997	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348150	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.237	chr11	-	8545	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	119.23563971304	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTACAGTACATCATTT	NA	False	NA	-17	True	AATAAA	-18	NA	62348157	62207831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272292_62273982_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.24	chr11	-	9399	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	787	combination_of_known_junctions	FALSE	canonical	2	9	junction_43	114.698472829508	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCACTGCCTTTTTTAT	NA	False	NA	-5	True	AGTAAA	-17	NA	62348150	62206464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62329163_62329342_62347973
ES.5132.242	chr11	-	7684	44	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	16	-317	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	128.089527236074	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348133	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.249	chr11	-	8210	44	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	-317	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	119.048344729818	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348137	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.25	chr11	-	9935	49	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	22	786	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_48	115.044737674814	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCACTGCCTTTTTTA	NA	False	NA	-6	True	AGTAAA	-16	NA	62348127	62206465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.256	chr11	-	8225	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-317	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	114.469640851837	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348149	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.258	chr11	-	8224	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-317	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_34	118.84518407482	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348156	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283395_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.259	chr11	-	8452	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	16	-317	combination_of_known_junctions	FALSE	canonical	3	87	junction_21	99.563906513896	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348133	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.26	chr11	-	9981	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	785	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	113.482292115636	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTGCCTTTTTT	NA	False	NA	-7	True	ATTAAA	-45	NA	62348152	62206466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269483_62273982_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.264	chr11	-	8448	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-317	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	102.791674736146	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348147	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.266	chr11	-	8320	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-317	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	112.722833292806	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348148	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.267	chr11	-	8148	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-317	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	112.469102736031	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGCTACAGTACATCATT	NA	False	NA	-18	True	AATAAA	-17	NA	62348156	62207832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.27	chr11	-	9922	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	27	785	combination_of_known_junctions	FALSE	canonical	3	20	junction_47	106.461281820835	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTGCCTTTTTT	NA	False	NA	-7	True	ATTAAA	-45	NA	62349340	62206466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.270	chr11	-	8559	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	-318	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_25	115.959040418677	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGCTACAGTACATCAT	NA	False	NA	-19	True	AATAAA	-16	NA	62348152	62207833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257859_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.278	chr11	-	5256	25	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	2220	-319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	117.743180682459	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAGCTACAGTACATCA	NA	False	NA	-20	True	AATAAA	-15	NA	62257907	62207834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216351_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789
ES.5132.28	chr11	-	9815	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	785	combination_of_known_junctions	FALSE	canonical	3	136	junction_28	97.9592234136012	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTCACTGCCTTTTTT	NA	False	NA	-7	True	ATTAAA	-45	NA	62348148	62206466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.286	chr11	-	8438	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	-320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	118.94850635658	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATAGCTACAGTACATC	NA	False	NA	-21	True	AATAAA	-14	NA	62348148	62207835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244055_62244152_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.287	chr11	-	7876	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	122.870161321656	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCATAGCTACAGTACAT	NA	False	NA	-22	True	AATAAA	-13	NA	62348149	62207836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.289	chr11	-	6429	31	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-1	-321	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	117.781983153433	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCATAGCTACAGTACAT	7199	False	NA	-22	True	AATAAA	-13	NA	62274181	62207836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986
ES.5132.292	chr11	-	8412	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	-323	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_45	103.373030619003	965	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCCATAGCTACAGTAC	NA	False	NA	-24	True	AATAAA	-11	NA	62348151	62207838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324486_62329163_62329342_62347973
ES.5132.293	chr11	-	8148	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	115	188	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_47	111.148708090086	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGCCTCTAAACCTCAC	NA	False	NA	87	True	TTTAAA	-22	NA	62348517	62208238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.294	chr11	-	8231	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	168	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	94.3317830185584	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTGTATCTTTTTAA	NA	False	NA	67	True	TTTAAA	-32	NA	62348137	62208258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.295	chr11	-	8071	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	168	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	100.934021899566	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTGTATCTTTTTAA	NA	False	NA	67	True	TTTAAA	-32	NA	62348145	62208258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.297	chr11	-	8041	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	165	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	99.7903591761201	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTGTATCTTTT	NA	False	NA	64	True	TTTAAA	-29	NA	62348148	62208261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.298	chr11	-	8064	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	164	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	100.285333079086	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTTTGTGTATCTTT	NA	False	NA	63	True	TTTAAA	-28	NA	62348148	62208262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269328_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.3	chr11	-	9951	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	45	968	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	111.181257857453	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTACCTGGTTATTCATG	NA	False	NA	NA	False	AGTAAA	-29	NA	62348104	62206283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.30	chr11	-	9728	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	99.4322003635432	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348147	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264454_62272254_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.300	chr11	-	8035	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	164	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	101.394790676242	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTTTGTGTATCTTT	NA	False	NA	63	True	TTTAAA	-28	NA	62348137	62208262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.302	chr11	-	7611	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	154	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_44	119.64291314853	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTTTTAAAATTCTTT	NA	False	NA	53	True	TTTAAA	-18	NA	62348147	62208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324486_62329163_62329342_62347973
ES.5132.303	chr11	-	7673	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	154	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	107.552563313183	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTTTTAAAATTCTTT	NA	False	NA	53	True	TTTAAA	-18	NA	62348148	62208272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.304	chr11	-	5535	27	NIC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	-4254	153	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	101.180699857575	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTTTTAAAATTCTT	NA	False	NA	52	True	TTTAAA	-17	NA	62264381	62208273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901
ES.5132.305	chr11	-	7885	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	149	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	107.564253009631	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAGAATTTTTAAAAT	NA	False	NA	48	True	TTTAAA	-13	NA	62348155	62208277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.306	chr11	-	7883	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	14	149	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	110.648229621339	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAGAATTTTTAAAAT	NA	False	NA	48	True	TTTAAA	-13	NA	62348135	62208277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.307	chr11	-	7967	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	149	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	110.631431249202	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAGAATTTTTAAAAT	NA	False	NA	48	True	TTTAAA	-13	NA	62348162	62208277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.31	chr11	-	9701	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	784	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	105.665887462118	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348143	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.311	chr11	-	8842	44	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	14	145	intron_retention	FALSE	canonical	1	2	junction_22	119.873540722207	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGGGAGAATTTTTA	NA	False	NA	44	True	TTTAAA	-9	NA	62348135	62208281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62221751_62224488_62224983_62225321_62225488_62228370_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257859_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.312	chr11	-	8194	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	145	combination_of_known_junctions	FALSE	canonical	3	93	junction_29	101.998649403564	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGGGAGAATTTTTA	NA	False	NA	44	True	TTTAAA	-9	NA	62348150	62208281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.315	chr11	-	7769	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	28	100	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	106.889369240712	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348121	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.316	chr11	-	8187	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	102.032717393694	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348153	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324552_62329163_62329342_62347973
ES.5132.319	chr11	-	8072	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	100	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_23	127.401810690172	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348149	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62248593_62248695_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.32	chr11	-	9335	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-122	784	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_46	122.750873469879	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62349489	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.323	chr11	-	8075	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	9	100	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_46	123.121299710262	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348140	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.324	chr11	-	7642	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	100	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	114.440525081772	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348147	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.325	chr11	-	7820	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	100	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	106.9138148212	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348154	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.326	chr11	-	8125	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	5	100	combination_of_known_junctions	FALSE	canonical	3	133	junction_28	92.0957959587207	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348144	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.327	chr11	-	7848	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	123	100	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_46	112.032614495847	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348509	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.328	chr11	-	7653	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	100	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	114.265468771178	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348155	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.329	chr11	-	7662	46	NIC	ENSMUSG00000018501.18	novel	7243	45	NA	NA	28	100	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	118.255747126282	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62349339	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.33	chr11	-	9088	45	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	784	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	123.227113443444	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348148	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.331	chr11	-	8089	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	100	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	110.090914483421	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348150	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.332	chr11	-	4766	4	ISM	ENSMUSG00000018501.18	ENSMUST00000156740.9	4215	23	33787	-296	-4007	100	3prime_fragment	FALSE	canonical	3	429	junction_3	22.69116323349	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62216054	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217
ES.5132.333	chr11	-	7874	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.249452957492	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGCTGTAGTATCTG	NA	False	NA	-1	True	AATAGA	-19	NA	62348156	62208326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.334	chr11	-	6729	37	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	3112	99	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	107.073947563885	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCTTGCTGTAGTATCT	NA	False	NA	-2	True	AATAGA	-18	NA	62289264	62208327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090
ES.5132.336	chr11	-	7965	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	14	99	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_24	112.798700286792	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCTTGCTGTAGTATCT	NA	False	NA	-2	True	AATAGA	-18	NA	62348135	62208327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.337	chr11	-	8066	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	99	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	108.488241326474	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCTTGCTGTAGTATCT	NA	False	NA	-2	True	AATAGA	-18	NA	62348149	62208327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.343	chr11	-	7747	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-213	98	combination_of_known_junctions	FALSE	canonical	3	20	junction_46	113.810792558683	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348371	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.344	chr11	-	7724	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	98	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	120.632743338747	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348147	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.346	chr11	-	5664	28	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-4324	98	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_23	105.397308279636	787	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62264451	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245479_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901
ES.5132.348	chr11	-	8382	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	98	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_46	106.10221068164	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348137	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347710
ES.5132.35	chr11	-	9497	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	15	784	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	114.205472703689	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348134	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228542_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.350	chr11	-	7677	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	98	combination_of_known_junctions	FALSE	canonical	3	38	junction_23	113.24810302829	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348157	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.351	chr11	-	8152	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	98	combination_of_known_junctions	FALSE	canonical	3	133	junction_28	92.4185912914548	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348149	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.352	chr11	-	8094	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	110.591734155479	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348156	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310419_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.354	chr11	-	7928	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	98	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	110.120620849883	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348156	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.355	chr11	-	7782	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	98	combination_of_known_junctions	FALSE	canonical	3	28	junction_26	121.331413836117	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348148	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.357	chr11	-	8010	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	56	98	combination_of_known_junctions	FALSE	canonical	3	20	junction_47	104.83683673165	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62349311	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.358	chr11	-	7947	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	98	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	117.60830989248	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348148	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.359	chr11	-	7785	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	98	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	107.967928479928	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCCTTGCTGTAGTATC	NA	False	NA	-3	True	AATAGA	-17	NA	62348148	62208328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.36	chr11	-	9488	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	784	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	110.506484490873	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348149	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.365	chr11	-	3407	16	NNC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	1683	97	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	118.631530378732	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCCTTGCTGTAGTAT	NA	False	NA	-4	True	AATAGA	-16	NA	62234044	62208329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228542_62228924_62229075_62229684_62229895_62231233_62231456_62233822
ES.5132.366	chr11	-	5558	30	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-122	97	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_28	115.748507565183	794	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCCTTGCTGTAGTAT	NA	False	NA	-4	True	AATAGA	-16	NA	62269465	62208329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322
ES.5132.368	chr11	-	7772	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	97	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	110.930418082484	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCCTTGCTGTAGTAT	NA	False	NA	-4	True	AATAGA	-16	NA	62348145	62208329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.369	chr11	-	7787	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	97	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	125.969885680264	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCCCTTGCTGTAGTAT	NA	False	NA	-4	True	AATAGA	-16	NA	62348150	62208329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310604_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.37	chr11	-	8615	43	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	126.289835097602	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348146	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.371	chr11	-	7864	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	117.388238687829	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCCCTTGCTGTAGTA	NA	False	NA	-5	True	AATAGA	-15	NA	62348156	62208330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.372	chr11	-	7759	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	96	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	106.013525905227	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCCCCTTGCTGTAGTA	NA	False	NA	-5	True	AATAGA	-15	NA	62348145	62208330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.373	chr11	-	7603	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	95	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	103.758334896487	962	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCCCCTTGCTGTAGT	NA	False	NA	-6	True	AATAGA	-14	NA	62348149	62208331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.374	chr11	-	7943	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	81	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	106.310324807521	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTTTTTTGCAGTGTAT	NA	False	NA	-20	True	AAGAAA	-36	NA	62348143	62208345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.377	chr11	-	7897	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	13	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	126.161264623331	960	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTCTGTAAATAGATGA	NA	False	NA	-36	True	AAGAAA	-20	NA	62348136	62208361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244055_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.378	chr11	-	8099	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	63	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	109.621947986285	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCTTCTGTAAATAGAT	NA	False	NA	-38	True	AAGAAA	-18	NA	62348155	62208363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.38	chr11	-	9857	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	784	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	108.606450027861	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCACTGCCTTTTT	NA	False	NA	-8	True	ATTAAA	-44	NA	62348143	62206467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.380	chr11	-	7751	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	5	18	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	104.398413915046	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTGCCCTCCCATGAT	NA	False	NA	NA	False	AAAAAG	-5	NA	62348144	62208604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.381	chr11	-	4852	27	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_14	72.5657424839608	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	62260245	62208622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119
ES.5132.382	chr11	-	6698	44	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	78	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_5	97.5226617310495	927	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTAATGTTGCCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	62348145	62216259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.383	chr11	-	5943	34	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-3147	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	106.937955630607	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTAATGTTGCCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	62289165	62216259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245294_62245392_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090
ES.5132.384	chr11	-	1219	3	ISM	ENSMUSG00000018501.18	ENSMUST00000161767.8	667	4	-159	-70	-159	70	intron_retention	FALSE	canonical	3	274	junction_2	99	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGCTATCTCTAATGT	NA	False	NA	NA	False	AATAAA	-10	NA	62221153	62216267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62216456_62217931_62218076_62220266
ES.5132.385	chr11	-	6910	41	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	-2096	combination_of_known_junctions	FALSE	canonical	3	136	junction_22	90.0952794268379	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGTAGTCTTTGCACA	NA	False	NA	NA	False	GATAAA	-16	NA	62348153	62220052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.386	chr11	-	4758	26	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	45	-3504	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	90.5224833950108	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATAGTTTATTGAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	62283440	62221460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330
ES.5132.387	chr11	-	9239	39	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-3504	intron_retention	FALSE	canonical	3	109	junction_24	94.0433425448517	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATAGTTTATTGAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	62348143	62221460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.388	chr11	-	6771	39	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	25	-5864	combination_of_known_junctions	FALSE	canonical	3	20	junction_38	103.766548258078	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCTAATTTCCATTCTA	NA	False	NA	NA	False	AATAAA	-25	NA	62349342	62223820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.389	chr11	-	6990	38	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-5865	combination_of_known_junctions	FALSE	canonical	3	28	junction_19	110.593762380954	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCTAATTTCCATTCT	NA	False	NA	NA	False	AATAAA	-24	NA	62348147	62223821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.39	chr11	-	9568	45	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-8	783	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	127.073275129219	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348166	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244055_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.390	chr11	-	6871	39	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-5868	combination_of_known_junctions	FALSE	canonical	3	136	junction_19	92.6625695766851	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGACCTAATTTCCAT	NA	False	NA	NA	False	AATAAA	-21	NA	62348145	62223824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.391	chr11	-	5684	34	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	2669	combination_of_known_junctions	FALSE	canonical	3	38	junction_12	120.066678750556	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGCTTTTTGAAACTT	NA	False	NA	NA	False	AATAAA	-16	NA	62348143	62228611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.392	chr11	-	5603	35	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	1717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	133.05340135621	836	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGATCTTATAATGAA	NA	False	NA	NA	False	AATAAA	-12	NA	62348145	62229563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269346_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347710_62347808_62347973
ES.5132.393	chr11	-	5131	34	NNC	ENSMUSG00000018501.18	novel	2979	20	NA	NA	11	-538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.474179734183	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTGTGTTCCATGTTT	NA	False	NA	NA	False	NA	NA	NA	62348138	62231818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62231967_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294620_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.394	chr11	-	1509	1	Intergenic	novelGene_4024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATGAAAATATGGAC	NA	False	NA	NA	False	NA	NA	NA	62233579	62232070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62232100_62233600
ES.5132.395	chr11	-	6784	29	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-1925	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	121.731570494683	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCTAGTTTGTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	62348149	62237535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.396	chr11	-	6757	29	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-1925	combination_of_known_junctions	FALSE	canonical	3	93	junction_11	111.199902730834	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTCTAGTTTGTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	62348143	62237535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.397	chr11	-	6731	29	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-1937	combination_of_known_junctions	FALSE	canonical	3	136	junction_10	100.588345776847	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGTTCAAATTCATGTC	NA	False	NA	NA	False	AATAAA	-22	NA	62348150	62237547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.398	chr11	-	6755	30	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	-1940	combination_of_known_junctions	FALSE	canonical	3	109	junction_15	102.120397107291	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCTGTTCAAATTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	62348147	62237550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.399	chr11	-	6772	30	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	26	-1945	combination_of_known_junctions	FALSE	canonical	3	20	junction_29	121.380583849119	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTATGCTGTTCAAA	NA	False	NA	NA	False	AATAAA	-14	NA	62349341	62237555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.4	chr11	-	10071	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-14	968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	115.899971538592	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTACCTGGTTATTCATG	NA	False	NA	NA	False	AGTAAA	-29	NA	62348172	62206283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244055_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.40	chr11	-	10021	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	9	783	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_4	102.128187055375	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348140	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.400	chr11	-	4312	28	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	1003	combination_of_known_junctions	FALSE	canonical	3	109	junction_13	105.751747497455	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTCTTTGTGAAAAG	NA	False	NA	NA	False	ATTAAA	-26	NA	62348143	62243728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.401	chr11	-	4275	27	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	996	combination_of_known_junctions	FALSE	canonical	3	133	junction_8	104.273657086199	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGAAATGCTTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	62348143	62243735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.402	chr11	-	4147	28	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	989	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_8	116.3562831844	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAACAATGAGAAATGC	NA	False	NA	NA	False	ATTAAA	-12	NA	62348148	62243742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264278_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.403	chr11	-	4171	28	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	8	989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	122.868672013717	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAACAATGAGAAATGC	NA	False	NA	NA	False	ATTAAA	-12	NA	62348141	62243742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269389_62272266_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.404	chr11	-	4046	24	NIC	ENSMUSG00000018501.18	novel	2815	20	NA	NA	5	-5309	combination_of_known_junctions	FALSE	canonical	3	109	junction_9	114.439969487313	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAACCGCCTGAGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	62348144	62250040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.405	chr11	-	3259	1	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-2892	-1991	mono-exon	FALSE	NA	NA	NA	NA	NA	521	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACCAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	62263019	62259760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62259800_62263000
ES.5132.406	chr11	-	3427	20	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	679	combination_of_known_junctions	FALSE	canonical	3	93	junction_2	127.293301031651	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATGTTATTATTTGG	NA	False	NA	NA	False	ATTAAA	-39	NA	62348147	62263465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.407	chr11	-	3417	21	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	656	combination_of_known_junctions	FALSE	canonical	3	109	junction_6	120.816917275686	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTGGTGTTAAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	62348148	62263488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.408	chr11	-	3873	20	NIC	ENSMUSG00000018501.18	novel	2815	20	NA	NA	-12	1375	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	113.862287429223	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCATTTCATTATTAATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	62348170	62266066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.409	chr11	-	3068	18	NIC	ENSMUSG00000018501.18	novel	2815	20	NA	NA	0	-1135	combination_of_known_junctions	FALSE	canonical	3	109	junction_4	114.972360150672	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGGAAAGCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	62348149	62268576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.410	chr11	-	4015	15	NIC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	12	-12	intron_retention	FALSE	canonical	3	186	junction_1	91.671552127079	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAAAAGAAGGATG	NA	False	NA	-51	True	GATAAA	-21	NA	62348137	62275594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.411	chr11	-	1951	17	NNC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	0	-12	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	155.715172169413	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAAAAGAAGGATG	NA	False	NA	-51	True	GATAAA	-21	NA	62348149	62275594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.412	chr11	-	1766	16	NIC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	4	-12	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	134.388590785577	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAGAAAAGAAGGATG	NA	False	NA	-51	True	GATAAA	-21	NA	62349363	62275594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.413	chr11	-	1824	15	ISM	ENSMUSG00000018501.18	ENSMUST00000018645.13	9037	46	10	68350	1	-19	5prime_fragment	FALSE	canonical	3	140	junction_7	111.224630218971	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGGAAGAAGAAAAG	NA	False	NA	-58	True	GATAAA	-14	NA	62348148	62275601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.414	chr11	-	2032	16	NNC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	-22	-28	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	140.234977408951	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGAGAAAAAGGAA	NA	False	NA	-67	True	GATAAA	-5	NA	62348180	62275610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294106_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.415	chr11	-	1419	14	NNC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	8387	-30	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	143.289296478164	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAACAGAGAAAAAGG	NA	False	NA	-69	True	GATAAA	-3	NA	62320920	62275612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62320851
ES.5132.416	chr11	-	1670	13	NIC	ENSMUSG00000018501.18	novel	1695	15	NA	NA	15	-399	combination_of_known_junctions	FALSE	canonical	3	168	junction_4	100.16524541421	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAGTGAACTCTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	62348134	62283273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.417	chr11	-	4230	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-5	-1054	4	1054	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTCCATGTATTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	62348154	62291154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.418	chr11	-	4161	9	NIC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	-27	1052	intron_retention	FALSE	canonical	3	20	junction_8	154.201927273948	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTTCCATGTATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	62349394	62291156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.419	chr11	-	2034	9	ISM	ENSMUSG00000018501.18	ENSMUST00000018645.13	9037	46	2	83906	2	1051	5prime_fragment	FALSE	canonical	3	140	junction_1	114.72242315694	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTGTTCCATGTATTA	NA	False	NA	NA	False	AATAAA	-15	NA	62348156	62291157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.42	chr11	-	9053	7	NIC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	-821	783	intron_retention	FALSE	canonical	3	24	junction_2	158.828436440778	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62222590	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62216456_62217931_62218076_62220266_62220479_62220801
ES.5132.420	chr11	-	3397	10	NNC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	4	1050	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.602983510119	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTGTTCCATGTATT	NA	False	NA	NA	False	AATAAA	-14	NA	62348145	62291158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62293323_62294142_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.421	chr11	-	3209	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-23	-15	-14	15	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAAGTGGTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	62348172	62292193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.422	chr11	-	3498	9	NIC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	-401	15	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	154.201927273948	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAAGTGGTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-29	NA	62349768	62292193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.423	chr11	-	3103	8	NIC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	82	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	211.007689191553	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTAAGTGGTTTGCC	NA	False	NA	NA	False	AATAAA	-26	NA	62348550	62292196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62324388_62324526_62329163_62329342_62348261
ES.5132.425	chr11	-	3206	9	NNC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	238	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	159.353380886632	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTTTAAGTGGTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	62347911	62292198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347710
ES.5132.426	chr11	-	3326	10	NNC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	-51	3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_9	191.620058745373	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCACCATAAATTTTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	62348209	62292205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62337623_62337716_62347973
ES.5132.427	chr11	-	3035	8	NIC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	169.351223009147	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCACCATAAATTTTTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	62348147	62292205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62329163_62329342_62347973
ES.5132.428	chr11	-	3465	9	NIC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_8	154.201927273948	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGCACCATAAATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	62348731	62292208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348261
ES.5132.429	chr11	-	3413	9	NNC	ENSMUSG00000018501.18	novel	3171	9	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	160.265746106272	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGCACCATAAATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	62349131	62292208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62348713
ES.5132.43	chr11	-	9870	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	783	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	110.791952800251	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348151	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.430	chr11	-	3049	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	0	122	0	-122	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGATGCATGAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	62348149	62292330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.431	chr11	-	2718	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-6	459	3	-459	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGCATGATGTTGTTT	NA	False	NA	NA	False	TATAAA	-15	NA	62348155	62292667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.432	chr11	-	2368	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	1	802	1	-802	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAATAAATTGGCA	NA	False	NA	NA	False	NA	NA	NA	62348148	62293010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.433	chr11	-	2135	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	0	1036	0	-1036	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGTGACATTTATTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	62348149	62293244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.434	chr11	-	1808	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	-2	1365	-2	-1365	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTTTCTGTGAGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	62348151	62293573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.435	chr11	-	1619	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	12	1540	12	-1540	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGAGCACATTATTT	NA	False	NA	NA	False	TTTAAA	-37	NA	62348137	62293748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.436	chr11	-	3393	1	Genic_Genomic	ENSMUSG00000018501.18	novel	NA	NA	NA	NA	-398	-35817	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGGTTGTTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	62349765	62346372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_62346400_62349800
ES.5132.44	chr11	-	14774	7	NIC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	-6425	783	intron_retention	FALSE	canonical	3	274	junction_5	72.7356324109595	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62228194	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62216456_62217931_62218076_62220266_62220479_62220801
ES.5132.46	chr11	-	10020	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-23	783	combination_of_known_junctions	FALSE	canonical	3	109	junction_33	99.2164577176669	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348181	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.48	chr11	-	9304	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	129.955998078861	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348154	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.49	chr11	-	9990	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	783	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	106.662208013801	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348148	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.50	chr11	-	9522	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	2	783	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	107.455476855174	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348156	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.51	chr11	-	9856	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	783	combination_of_known_junctions	FALSE	canonical	3	87	junction_21	101.313273351399	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348152	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.52	chr11	-	10000	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	783	combination_of_known_junctions	FALSE	canonical	3	133	junction_28	92.4185912914548	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348137	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.53	chr11	-	9680	46	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-4	783	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_18	109.894674603335	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348153	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.55	chr11	-	9748	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	113	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_46	118.030161791923	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348036	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347830
ES.5132.56	chr11	-	9860	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	118.509125625397	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348160	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244055_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.57	chr11	-	9501	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	783	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_9	113.818388771119	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348145	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212269_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.59	chr11	-	9327	45	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	4789	783	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	105.665959220633	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62324518	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388
ES.5132.6	chr11	-	9664	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	114.899479755857	968	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGCCTTTTTTATAATA	NA	False	NA	-1	True	AGTAAA	-21	NA	62348149	62206460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224845_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244055_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.60	chr11	-	9995	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	12	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	107.654930778776	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCACTGCCTTTT	NA	False	NA	-9	True	ATTAAA	-43	NA	62348137	62206468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301641_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.62	chr11	-	3416	8	NNC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	13	782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	154.979656334472	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTCTCACTGCCTTT	NA	False	NA	-10	True	ATTAAA	-42	NA	62220857	62206469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216477_62217931_62218076_62220266_62220479_62220801
ES.5132.63	chr11	-	9798	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	3	782	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	106.457362978449	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTCTCACTGCCTTT	NA	False	NA	-10	True	ATTAAA	-42	NA	62348155	62206469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.64	chr11	-	9643	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-2	781	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	104.822168044647	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62348151	62206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.65	chr11	-	10000	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	1	781	combination_of_known_junctions	FALSE	canonical	3	87	junction_21	102.844426233234	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62348148	62206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245208_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.67	chr11	-	7369	28	NNC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	-4192	781	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	91.892374573743	792	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62264319	62206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210248_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901
ES.5132.69	chr11	-	9663	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	11	781	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	103.739788711057	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62348138	62206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.73	chr11	-	9968	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	781	combination_of_known_junctions	FALSE	canonical	3	28	junction_28	96.4143765495184	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTCTCACTGCCTT	NA	False	NA	-11	True	ATTAAA	-41	NA	62348152	62206470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.77	chr11	-	9838	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-101	765	combination_of_known_junctions	FALSE	canonical	3	20	junction_47	101.702946671678	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAGGAGATGAGTCCC	NA	False	NA	-27	True	ATTAAA	-25	NA	62349468	62206486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62349280
ES.5132.80	chr11	-	8774	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	109	junction_33	95.5315964318832	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTCTCCTATGGCT	NA	False	NA	NA	False	NA	NA	NA	62348149	62207517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.81	chr11	-	8757	48	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	111.370307556192	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTCTCCTATGGCT	NA	False	NA	NA	False	NA	NA	NA	62348143	62207517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236136_62240216_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.82	chr11	-	3467	13	NNC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	6739	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	125.218475740071	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGATTTGTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	62228988	62207523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228536_62228924
ES.5132.84	chr11	-	6763	33	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	59	-194	combination_of_known_junctions	FALSE	canonical	3	136	junction_28	77.8068271024465	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTCCAGGCTTG	5770	False	NA	NA	False	AAAAAG	-17	NA	62275610	62207709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543
ES.5132.85	chr11	-	8552	46	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-196	combination_of_known_junctions	FALSE	canonical	3	28	junction_27	113.428487287784	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTCTTCCAGGCT	NA	False	NA	NA	False	AAAAAG	-15	NA	62348145	62207711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.86	chr11	-	3723	15	NNC	ENSMUSG00000018501.18	novel	6328	28	NA	NA	4327	-198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	123.601008020459	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTCTGTCTTCCAGG	NA	False	NA	NA	False	AAAAAG	-13	NA	62231400	62207713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225482_62228366_62228521_62228924_62229075_62229684_62229895_62231233
ES.5132.88	chr11	-	8608	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	6	-300	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	111.737041090262	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGACGTAAAGAGTCT	NA	False	NA	-1	True	AATAAA	-34	NA	62348143	62207815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240220_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.89	chr11	-	8562	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-23	-300	combination_of_known_junctions	FALSE	canonical	3	49	junction_18	103.722767852041	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGACGTAAAGAGTCT	NA	False	NA	-1	True	AATAAA	-34	NA	62348181	62207815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.9	chr11	-	9845	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	9	790	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	108.210281009947	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTTTTTATAAT	NA	False	NA	-2	True	AGTAAA	-20	NA	62348140	62206461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210252_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.90	chr11	-	8622	48	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	4	-300	combination_of_known_junctions	FALSE	canonical	3	28	junction_28	98.6407210614183	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTGACGTAAAGAGTCT	NA	False	NA	-1	True	AATAAA	-34	NA	62348154	62207815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264401_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.92	chr11	-	8345	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-18	-302	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	105.89225718779	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGTGACGTAAAGAGT	NA	False	NA	-3	True	AATAAA	-32	NA	62348176	62207817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264281_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.95	chr11	-	8487	47	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	0	-304	combination_of_known_junctions	FALSE	canonical	3	38	junction_24	103.959587993257	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATTTGTGACGTAAAGA	NA	False	NA	-5	True	AATAAA	-30	NA	62348149	62207819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294261_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.98	chr11	-	8642	47	NNC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-1	-305	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	108.265941910158	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTGTGACGTAAAG	NA	False	NA	-6	True	AATAAA	-29	NA	62348150	62207820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275672_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286057_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5132.99	chr11	-	8438	45	NIC	ENSMUSG00000018501.18	novel	9037	46	NA	NA	-3	-305	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	112.12781179389	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTTGTGACGTAAAG	NA	False	NA	-6	True	AATAAA	-29	NA	62348161	62207820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586_62250761_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269322_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ES.5133.1	chr11	-	7762	1	Intergenic	novelGene_4032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	62358120	62350358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62350400_62358100
ES.5133.2	chr11	-	4184	2	Antisense	novelGene_ENSMUSG00000014245.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAACCTTTGACCATAAG	NA	False	NA	NA	False	NA	NA	NA	62358120	62353537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62353980_62354378
ES.5133.3	chr11	-	4583	1	Intergenic	novelGene_4033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAACCTTTGACCATAAG	NA	False	NA	NA	False	NA	NA	NA	62358120	62353537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62353500_62358100
ES.5133.4	chr11	-	3854	1	Intergenic	novelGene_4034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCAACAAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	62358120	62354266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62354300_62358100
ES.5134.1	chr11	-	186	1	Intergenic	novelGene_4036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTAATTATGAGT	NA	False	NA	NA	False	NA	NA	NA	62360895	62360709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62360700_62360900
ES.5135.1	chr11	-	6258	3	NNC	ENSMUSG00000018509.9	novel	492	4	NA	NA	1324	41137	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	716.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAACAATAACTAAATC	5660	False	NA	NA	False	NA	NA	NA	62427987	62374634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62374691_62419458_62424781_62427107
ES.5135.11	chr11	-	6648	1	Genic_Genomic	ENSMUSG00000018509.9	novel	NA	NA	NA	NA	-3696	1	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTATGACATATTTCTT	NA	False	NA	-13	True	AATAAA	-20	NA	62422418	62415770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_62415800_62422400
ES.5135.13	chr11	-	1205	6	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	708.707160962834	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTATGACATATTTCT	8375	False	NA	-14	True	AATAAA	-19	NA	62430083	62415771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62416114_62418317_62418433_62424710_62424781_62424871_62425049_62427107_62427207_62429681
ES.5135.14	chr11	-	1171	6	NNC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	708.595907411269	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTACTATGACATA	8398	False	NA	-19	True	AATAAA	-14	NA	62430060	62415776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62416114_62418317_62418433_62421865_62422037_62424710_62424781_62427107_62427207_62429681
ES.5135.16	chr11	-	3326	4	NNC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	44	-2	intron_retention	FALSE	canonical	3	16	junction_3	714.234321960704	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTACTATGACATA	8415	False	NA	-19	True	AATAAA	-14	NA	62430043	62415776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62416114_62418317_62418433_62424710_62427223_62429681
ES.5135.2	chr11	-	4818	1	Antisense	novelGene_ENSMUSG00000014245.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACAAGGGGA	6962	False	NA	NA	False	NA	NA	NA	62403950	62399132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62399100_62404000
ES.5135.20	chr11	-	1377	5	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	1447	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	753.903632767478	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTACTATGACATA	5783	False	NA	-19	True	AATAAA	-14	NA	62427864	62415776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62416114_62418317_62418433_62424710_62424781_62424871_62424970_62427107
ES.5135.22	chr11	-	1005	5	NNC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	643.161867262045	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTACTATGACATA	8409	False	NA	-19	True	AATAAA	-14	NA	62430049	62415776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427223_62429681
ES.5135.23	chr11	-	991	5	NNC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	626.124787881777	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTATTACTATGACATA	8414	False	NA	-19	True	AATAAA	-14	NA	62430044	62415776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62416121_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ES.5135.24	chr11	-	789	5	NNC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	3546	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	755.186069786778	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGCTATTACTATGAC	7882	False	NA	-22	True	AATAAA	-11	NA	62425765	62415779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62416114_62418317_62418433_62424710_62424781_62424871_62425049_62425672
ES.5135.25	chr11	-	3517	1	NIC	ENSMUSG00000018509.9	novel	1032	5	NA	NA	4377	-3099	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTACTTTTTATG	8713	False	NA	NA	False	TTTAAA	-14	NA	62424934	62421417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62421400_62424900
ES.5135.26	chr11	-	729	4	NNC	ENSMUSG00000018509.9	novel	492	4	NA	NA	37	2900	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	672.235243216407	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAATAAATCTTAA	8408	False	NA	NA	False	NA	NA	NA	62430050	62421812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62422014_62424710_62424781_62427107_62427197_62429681
ES.5135.27	chr11	-	623	4	NNC	ENSMUSG00000087120.2	novel	294	2	NA	NA	22	4736	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAAAGTTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	62441845	62436136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62436341_62436437_62436568_62440872_62441003_62441686
ES.5135.3	chr11	-	4443	1	Antisense	novelGene_ENSMUSG00000014245.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	6966	False	NA	NA	False	NA	NA	NA	62403946	62399503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62399500_62403900
ES.5135.4	chr11	-	4864	2	Antisense	novelGene_ENSMUSG00000014245.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGTCGTTGAAAAGCT	7696	False	NA	NA	False	NA	NA	NA	62408622	62403234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62405976_62406499
ES.5135.5	chr11	-	3810	1	Intergenic	novelGene_4038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGGTATTGTCAA	5729	False	NA	NA	False	CATAAA	-8	NA	62410589	62406779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62406800_62410600
ES.5135.6	chr11	-	338	2	NNC	ENSMUSG00000085748.2	novel	1624	2	NA	NA	1602	41665	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAACCAA	7754	False	NA	NA	False	NA	NA	NA	62455607	62413637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62413897_62455528
ES.5135.7	chr11	-	329	1	Antisense	novelGene_ENSMUSG00000086636.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	2343	False	NA	NA	False	NA	NA	NA	62413975	62413646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62413600_62414000
ES.5135.8	chr11	-	222	1	Intergenic	novelGene_4040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACCTGGGAGGC	2342	False	NA	NA	False	NA	NA	NA	62413976	62413754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62413800_62414000
ES.5135.9	chr11	-	1390	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	-348	-10	-348	10	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTCTTTGAACTTTG	8023	False	NA	-4	True	AATAAA	-29	NA	62430435	62415761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ES.5136.1	chr11	-	4690	1	Antisense	novelGene_ENSMUSG00000077457.3_AS_novelGene_ENSMUSG00000064437.4_AS_novelGene_ENSMUSG00000065734.3_AS_novelGene_ENSMUSG00000086841.2_AS_novelGene_ENSMUSG00000018507.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTTTGCCCTCCATGC	NA	False	NA	NA	False	AATAGA	-12	NA	62495602	62490912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_62490900_62495600
ES.5136.10	chr11	-	2071	4	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.5034434281774	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATACGGACTGTGCTTT	5425	False	NA	-7	True	AATACA	-12	NA	62539394	62495714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62497120_62500028_62500142_62511259_62511389_62538970
ES.5136.11	chr11	-	4471	3	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-50	-7194	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	59	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCAGTGTTGGTTTTTG	5420	False	NA	NA	False	AATAAA	-32	NA	62539399	62504046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62507960_62511259_62511389_62538970
ES.5136.12	chr11	-	170	1	Intergenic	novelGene_4042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGAAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	62511779	62511609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62511600_62511800
ES.5136.2	chr11	-	4539	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-95	-2460	-95	2460	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTGGTGGAGAGCCT	5375	False	NA	NA	False	TTTAAA	-39	NA	62539444	62493249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
ES.5136.3	chr11	-	2157	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-71	-102	-71	102	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCATAGAAGATCCTG	5399	False	NA	NA	False	TATAAA	-16	NA	62539420	62495607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
ES.5136.4	chr11	-	2142	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	-159	1	-159	-1	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGGACTGTGCTTTATTA	5311	False	NA	-3	True	AATACA	-16	NA	62539508	62495710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
ES.5136.5	chr11	-	1831	5	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-228	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.4275701720865	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGACTGTGCTTTATT	8	True	NA	-4	True	AATACA	-15	NA	62539103	62495711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62497073_62500028_62500142_62505461_62505557_62511259_62511389_62538970
ES.5136.6	chr11	-	1975	5	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.5330488245884	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGACTGTGCTTTATT	5423	False	NA	-4	True	AATACA	-15	NA	62539396	62495711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62496242_62496295_62497073_62500028_62500142_62511259_62511389_62538970
ES.5136.7	chr11	-	1678	4	FSM	ENSMUSG00000046417.15	ENSMUST00000143262.2	567	4	30	-1141	21	-2	multi-exon	FALSE	canonical	2	4	junction_3	67.1532244613433	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGACTGTGCTTTATT	5974	False	NA	-4	True	AATACA	-15	NA	62538845	62495711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538770
ES.5136.8	chr11	-	1857	5	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	60	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	60.5330488245884	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACGGACTGTGCTTTAT	5530	False	NA	-5	True	AATACA	-14	NA	62539289	62495712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62496423_62496486_62497073_62500028_62500142_62511259_62511389_62538970
ES.5136.9	chr11	-	1894	5	NNC	ENSMUSG00000046417.15	novel	1984	4	NA	NA	-71	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.5330488245884	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACGGACTGTGCTTTAT	5399	False	NA	-5	True	AATACA	-14	NA	62539420	62495712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970_62539214_62539371
ES.5137.1	chr11	+	160	1	Intergenic	novelGene_4045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	62594463	62594623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62594500_62594600
ES.5138.1	chr11	-	5050	6	NIC	ENSMUSG00000005267.14	novel	1605	8	NA	NA	2	-221	intron_retention	FALSE	canonical	0	0	junction_5	1.16619037896906	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTCTGTGCCTTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	62622729	62602311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
ES.5138.2	chr11	-	4924	5	NIC	ENSMUSG00000005267.14	novel	1605	8	NA	NA	1	-224	intron_retention	FALSE	canonical	0	0	junction_3	1.22474487139159	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCCTGTCTCTGTGCCTT	NA	False	NA	NA	False	AATAGA	-12	NA	62622710	62602314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62606203_62615622_62615710_62616073_62616201_62619107_62619712_62622492
ES.5138.3	chr11	-	3461	6	NIC	ENSMUSG00000005267.14	novel	3391	6	NA	NA	15	-228	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.16619037896906	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAATCCTGTCTCTGTG	NA	False	NA	NA	False	AATAGA	-8	NA	62622696	62602318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62603046_62604490_62606203_62615622_62615710_62616073_62616201_62619107_62619712_62622492
ES.5138.4	chr11	-	2808	6	NIC	ENSMUSG00000005267.14	novel	3220	5	NA	NA	-2	-425	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.16619037896906	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGCAATATGCTTGATA	NA	False	NA	NA	False	AAGAAA	-7	NA	62622713	62604537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
ES.5138.5	chr11	-	177	1	Intergenic	novelGene_4046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAATACATACATAA	6275	False	NA	NA	False	NA	NA	NA	62610861	62610684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62610700_62610900
ES.5139.1	chr11	-	1997	7	FSM	ENSMUSG00000047342.18	ENSMUST00000207597.2	1668	7	10	-339	-2	339	multi-exon	FALSE	canonical	0	0	junction_2	23.6249632568791	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGGTCTGCTTCACGG	NA	False	NA	NA	False	AATAAA	-12	NA	62680237	62643063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62644509_62646613_62646679_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.10	chr11	-	3979	1	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	571	3	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTGTGTCTGTGTGTGT	NA	False	NA	-2	True	AATAGA	-19	NA	62674406	62670427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62670400_62674400
ES.5139.11	chr11	-	1787	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	45	1219	0	-1	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGGGTGTGTCTGTGT	NA	False	NA	-6	True	AATAGA	-15	NA	62680243	62670431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.12	chr11	-	1582	4	NIC	ENSMUSG00000047342.18	novel	679	6	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.3130005674953	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGGGTGTGTCTGTGT	NA	False	NA	-6	True	AATAGA	-15	NA	62680243	62670431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62671726_62678784_62678871_62679755_62679916_62680201
ES.5139.13	chr11	-	1723	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-8	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCTGGGGTGTGTCTGT	NA	False	NA	-8	True	AATAGA	-13	NA	62680296	62670433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
ES.5139.14	chr11	-	2914	5	FSM	ENSMUSG00000047342.18	ENSMUST00000145474.8	641	5	-29	-2244	-15	-533	multi-exon	FALSE	canonical	3	31	junction_2	12.1243556529821	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTGTGTGTGTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	62680264	62672097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.15	chr11	-	2765	5	NNC	ENSMUSG00000047342.18	novel	641	5	NA	NA	14	-831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.5208236971919	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCCAGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	62680198	62672395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_62674588_62675704_62675820_62678784_62678871_62679755_62679884_62679954
ES.5139.16	chr11	-	674	5	FSM	ENSMUSG00000047342.18	ENSMUST00000145474.8	641	5	-29	-4	-15	4	multi-exon	FALSE	canonical	3	31	junction_2	12.1243556529821	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTTTCACTCTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	62680264	62674337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.2	chr11	-	178	1	Intergenic	novelGene_4047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCATAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62664552	62664374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_62664400_62664600
ES.5139.3	chr11	-	4672	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	-111	1821	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	19.6185852927496	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACTTAAGTTCTTCTT	NA	False	NA	NA	False	AATACA	-36	NA	62679917	62667391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755
ES.5139.4	chr11	-	3024	6	FSM	ENSMUSG00000047342.18	ENSMUST00000152602.8	679	6	-2	-2343	-2	0	multi-exon	FALSE	canonical	0	0	junction_3	21.1660104885167	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	62680245	62669212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62671726_62674497_62674588_62675704_62675836_62678784_62678871_62679755_62679916_62680201
ES.5139.5	chr11	-	3047	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	4	0	4	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	62680284	62669212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.6	chr11	-	2801	4	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.3130005674953	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATCGCAGGTTTTTAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	62680247	62669216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62671726_62678784_62678871_62679755_62679916_62680201
ES.5139.7	chr11	-	2607	1	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	3150	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATCGCAGGTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	62671827	62669220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_62669200_62671800
ES.5139.8	chr11	-	2732	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	50	269	-3	-269	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGCTTTCATGCTTGC	NA	False	NA	NA	False	GATAAA	-18	NA	62680238	62669481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ES.5139.9	chr11	-	2595	5	ISM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	90	652	14	566	3prime_fragment	FALSE	canonical	3	31	junction_3	12.1963109176505	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCTCTAGTTCCCTTGG	NA	False	NA	NA	False	CATAAA	-26	NA	62680198	62669864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755
ES.514.1	chr1	-	4270	1	NIC	ENSMUSG00000054770.17	novel	5016	10	NA	NA	14503	-36582	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCATTTAAATGGAGAG	1662	False	NA	NA	False	NA	NA	NA	58043612	58039342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58039300_58043600
ES.514.2	chr1	-	3613	2	Genic_Genomic	ENSMUSG00000054770.17	novel	5016	10	NA	NA	14503	-36616	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	1662	False	NA	NA	False	NA	NA	NA	58043612	58039376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_58039752_58040374
ES.514.3	chr1	-	2636	2	Genic_Genomic	ENSMUSG00000054770.17	novel	5016	10	NA	NA	14503	-36618	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	1662	False	NA	NA	False	NA	NA	NA	58043612	58039378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_58040453_58042050
ES.5140.1	chr11	+	1859	2	Intergenic	novelGene_4048	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACGTGGTGCTGCGTCTT	NA	False	NA	NA	False	NA	NA	NA	62685575	62689373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62685789_62687727
ES.5140.2	chr11	+	1653	1	Intergenic	novelGene_4049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGTGGTGCTGCGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	62687722	62689375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62687700_62689400
ES.5141.1	chr11	+	5017	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	-2733	1622	-2733	-143	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTTTGGAGTGCTTT	NA	False	NA	26	True	AATAAA	-36	NA	62708323	62732140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ES.5141.2	chr11	+	3954	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	-47	-1	-47	1	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGCTAGTATTTGC	NA	False	NA	NA	False	TTTAAA	-6	NA	62711009	62733763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ES.5141.3	chr11	+	3834	7	NIC	ENSMUSG00000047821.17	novel	3574	7	NA	NA	-32	-7	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.7017059221718	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATATTTTTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	62711024	62733755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62711464_62711560_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ES.5141.4	chr11	+	4539	5	NIC	ENSMUSG00000047821.17	novel	3906	6	NA	NA	2	-143	intron_retention	FALSE	canonical	3	37	junction_3	1.78535710713571	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTTTGGAGTGCTTT	NA	False	NA	26	True	AATAAA	-36	NA	62711267	62732140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62711826_62719928_62720025_62724804_62727671_62728060_62728157_62731217
ES.5141.5	chr11	+	2202	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	221	1483	12	-4	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGATTCAAGTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	62711277	62732279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ES.5141.6	chr11	+	3891	4	FSM	ENSMUSG00000047821.17	ENSMUST00000128623.2	1741	4	-665	-1485	-665	6	multi-exon	FALSE	canonical	3	37	junction_2	2.82842712474619	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTAGTATTTGCCATTT	NA	False	NA	NA	False	AATATA	-5	NA	62723960	62733768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62725039_62727504_62727671_62728060_62728157_62731217
ES.5142.1	chr11	+	3302	13	FSM	ENSMUSG00000090173.9	ENSMUST00000150989.8	3267	13	-37	2	17	-2	multi-exon	FALSE	canonical	0	0	junction_8	1.80277563773199	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGAGTGTTGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	62737911	62768286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62738622_62741397_62741569_62743780_62743982_62744090_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767_62766016_62767449
ES.5142.2	chr11	+	4636	12	NNC	ENSMUSG00000090173.9	novel	3267	13	NA	NA	-5	-6	intron_retention	FALSE	canonical	0	0	junction_2	2.09288444240388	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAAGTGAGTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	62737943	62768282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62738622_62741397_62741527_62743780_62743982_62744090_62744219_62746111_62746235_62748511_62748622_62750665_62750867_62753455_62753578_62758346_62758496_62759837_62759981_62764196_62766016_62767449
ES.5143.1	chr11	+	1797	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	-10	-3	-10	3	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGGTCCCATTTAG	9231	False	NA	13	True	TATAAA	-21	NA	62770270	62786014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.10	chr11	+	1134	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-44	-570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	179.477637108979	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAACTGATTTCTAAAAT	9356	False	NA	NA	False	AGTAAA	-20	NA	62770395	62785441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62770422_62772762_62772846_62774417_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.11	chr11	+	1482	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	115	187	-44	-187	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTGTAGGCAGCTGG	9356	False	NA	-83	True	AATATA	-21	NA	62770395	62785824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.12	chr11	+	1551	6	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	2479	95	-1728	-95	3prime_fragment	FALSE	canonical	3	463	junction_3	15.2315462117278	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAATGTCTTGTTT	NA	False	NA	9	True	AATACA	-17	NA	62772759	62785916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.13	chr11	+	7269	5	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-1728	2	intron_retention	FALSE	canonical	3	463	junction_3	16.695807857064	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTGGTCCCATTTA	NA	False	NA	12	True	TATAAA	-20	NA	62772759	62786013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62772846_62774452_62774598_62775901_62775992_62777014_62782897_62784947
ES.5143.14	chr11	+	1417	4	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	5619	0	1412	0	3prime_fragment	FALSE	canonical	3	463	junction_1	16.5193489244852	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	NA	False	NA	10	True	TATAAA	-18	NA	62775899	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.15	chr11	+	6987	2	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	2401	-85	intron_retention	FALSE	canonical	3	497	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTTTATTAAGTATC	NA	False	NA	19	True	AATACA	-27	NA	62776888	62785926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62782897_62784947
ES.5143.2	chr11	+	2790	6	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	17	0	intron_retention	FALSE	canonical	3	376	junction_1	49.8702316016278	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9258	False	NA	10	True	TATAAA	-18	NA	62770297	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62777147_62782767_62782897_62784947
ES.5143.3	chr11	+	1704	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-8	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	179.477637108979	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCTTGTTTATTAAGT	9268	False	NA	16	True	AATACA	-24	NA	62770307	62785923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62770422_62772762_62772846_62774417_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.4	chr11	+	1616	6	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	189.081569699429	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9280	False	NA	10	True	TATAAA	-18	NA	62770319	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62784947
ES.5143.5	chr11	+	1853	7	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	171.994831963702	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9293	False	NA	10	True	TATAAA	-18	NA	62770332	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_62770543_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.6	chr11	+	1774	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	231.341498414981	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9298	False	NA	10	True	TATAAA	-18	NA	62770337	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62770422_62772767_62772846_62774400_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.7	chr11	+	1897	7	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	223.77847428999	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9301	False	NA	10	True	TATAAA	-18	NA	62770340	62786011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62770543_62772762_62772846_62774400_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5143.8	chr11	+	1610	6	NNC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	62	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	228.827795514444	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGGTCCCATTTAG	9338	False	NA	13	True	TATAAA	-21	NA	62770377	62786014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_62770422_62772762_62772846_62774400_62774598_62775901_62775992_62782767_62782897_62784947
ES.5143.9	chr11	+	1383	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	110	291	-49	-291	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAATTTATTTTTTCTTT	9351	False	NA	NA	False	AGTAAA	-17	NA	62770390	62785720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ES.5144.1	chr11	+	175	1	Intergenic	novelGene_4050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGACAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	62790020	62790195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_62790000_62790200
ES.5145.1	chr11	-	185	1	Intergenic	novelGene_4051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTCAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	63407589	63407404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_63407400_63407600
ES.5146.1	chr11	+	140	1	Intergenic	novelGene_4052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63637721	63637861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_63637700_63637900
ES.5147.1	chr11	+	2103	2	Antisense	novelGene_ENSMUSG00000070407.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGGGCGGTCCCGGCCT	NA	False	NA	NA	False	NA	NA	NA	63779445	63813136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_63780571_63812158
ES.5148.1	chr11	-	4990	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	-76	-3	-76	3	multi-exon	FALSE	canonical	3	10	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGTTCCTATTTTG	NA	False	NA	1	True	AATAAA	-18	NA	63813192	63776614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_63780572_63812159
ES.5148.2	chr11	-	4951	2	NNC	ENSMUSG00000070407.6	novel	4911	2	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGTATGTTCCTATT	NA	False	NA	-2	True	AATAAA	-15	NA	63813134	63776617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63780594_63812159
ES.5148.3	chr11	-	4180	2	NNC	ENSMUSG00000070407.6	novel	4911	2	NA	NA	22348	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAGTATGTTCCTAT	NA	False	NA	-3	True	AATAAA	-14	NA	63790768	63776618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63780572_63790541
ES.5149.1	chr11	-	235	1	Intergenic	novelGene_4053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTCAATTCCCAAC	NA	False	NA	NA	False	NA	NA	NA	63820266	63820031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_63820000_63820300
ES.515.1	chr1	-	2800	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58048331	58045531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58045500_58048300
ES.5150.1	chr11	+	3769	1	NIC	ENSMUSG00000087497.8	novel	901	2	NA	NA	6	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCATGTTTCTT	4240	False	NA	NA	False	AATAAA	-21	NA	63970315	63974084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_63970300_63974100
ES.5150.2	chr11	+	882	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	18	1	18	-1	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGTTTCATGTTTCTT	4252	False	NA	NA	False	AATAAA	-21	NA	63970327	63974084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_63970604_63973478
ES.5150.3	chr11	+	493	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	41	367	41	-367	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGCTGATGTATTTAG	4275	False	NA	NA	False	AATAAA	-15	NA	63970350	63973718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_63970604_63973478
ES.5151.1	chr11	-	3230	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-4	-311	-2	311	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTCCCTCCCTGTCT	5003	False	NA	NA	False	AATAAA	-15	NA	63970296	63853141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.10	chr11	-	3905	1	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	111671	-1264	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	63858621	63854716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_63854700_63858600
ES.5151.11	chr11	-	1502	6	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	14	-1265	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	95.2100834995958	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5021	False	NA	NA	False	AAGAAA	-25	NA	63970278	63854717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63970161
ES.5151.12	chr11	-	1563	7	NNC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	-2	-1268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	96.9398438895655	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TACAAAAAAAAAAAAAAAAA	5003	False	NA	NA	False	AAGAAA	-22	NA	63970296	63854720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970249
ES.5151.13	chr11	-	2044	7	NNC	ENSMUSG00000042148.9	novel	706	3	NA	NA	9	-5423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.8710279421526	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATAAAGTAAGTCTGA	5016	False	NA	NA	False	NA	NA	NA	63970283	63858875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63859916_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.14	chr11	-	3765	1	Intergenic	novelGene_4054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTAAAGACCCATGACG	NA	False	NA	NA	False	NA	NA	NA	63864941	63861176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_63861200_63864900
ES.5151.15	chr11	-	213	1	Intergenic	novelGene_4055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCCTTAGTATAATCA	NA	False	NA	NA	False	NA	NA	NA	63874988	63874775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_63874800_63875000
ES.5151.16	chr11	-	5003	5	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	14	27022	14	-27022	5prime_fragment	FALSE	canonical	3	230	junction_2	29.969776442276	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	5021	False	NA	NA	False	NA	NA	NA	63970278	63880474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.17	chr11	-	180	1	Intergenic	novelGene_4056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	63896863	63896683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_63896700_63896900
ES.5151.18	chr11	-	3206	5	NNC	ENSMUSG00000042148.9	novel	706	3	NA	NA	14	-52003	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.379789850627	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGTTACTTGCTGAAA	5021	False	NA	NA	False	AATAAA	-17	NA	63970278	63905455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63907968_63936052_63936178_63962343_63962663_63964362_63964491_63970156
ES.5151.19	chr11	-	3211	5	NNC	ENSMUSG00000042148.9	novel	706	3	NA	NA	7	-52006	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	118.083392143011	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACATTGTTACTTGCTG	5014	False	NA	NA	False	AATAAA	-14	NA	63970285	63905458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63907968_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.2	chr11	-	2936	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-19	-2	-17	2	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGTGTGTCCTGTGTTT	4988	False	NA	-2	True	AATAAA	-16	NA	63970311	63853450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.20	chr11	-	966	5	NNC	ENSMUSG00000042148.9	novel	706	3	NA	NA	-5	-54265	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	118.083392143011	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTCTGTCTCCTGATTT	5000	False	NA	NA	False	ACTAAA	-20	NA	63970299	63907717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63907968_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.3	chr11	-	3021	8	NNC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	118.613417694386	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5015	False	NA	-4	True	AATAAA	-14	NA	63970284	63853452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63955486_63955601_63962343_63962663_63964362_63964497_63970161
ES.5151.4	chr11	-	3055	8	NNC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	119.498783189091	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTGAGCGTGTGT	5009	False	NA	-11	True	AATAAA	-7	NA	63970290	63853459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63950514_63950664_63962343_63962663_63964362_63964497_63970161
ES.5151.5	chr11	-	2682	6	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	106.914919445323	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTGAGCGTGTGT	5000	False	NA	-11	True	AATAAA	-7	NA	63970299	63853459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_63855355_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.6	chr11	-	2972	8	NNC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	118.070024190075	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACCTGAGCGTGTGT	5011	False	NA	-11	True	AATAAA	-7	NA	63970288	63853459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63855355_63867069_63867303_63874229_63874298_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.7	chr11	-	1700	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	-24	1239	-22	-1239	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	4983	False	NA	NA	False	NA	NA	NA	63970316	63854691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.8	chr11	-	1788	7	NNC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	-2	-1239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.6259671638541	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	5003	False	NA	NA	False	NA	NA	NA	63970296	63854691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_63855355_63867069_63867303_63884711_63884783_63935944_63936178_63962343_63962663_63964362_63964497_63970161
ES.5151.9	chr11	-	1447	6	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	-2	-1239	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	106.914919445323	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	5003	False	NA	NA	False	NA	NA	NA	63970296	63854691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_63855355_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ES.5152.1	chr11	+	4078	2	FSM	ENSMUSG00000047759.7	ENSMUST00000058652.6	3939	2	-142	3	-142	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTCTTGCATGTAGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	64326015	64413664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64327453_64411023
ES.5153.1	chr11	+	2933	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-43	-6	-7	6	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTGGGGTCTTCTGT	NA	False	NA	21	True	AATAAA	-21	NA	64869856	64892432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.10	chr11	+	3289	23	NIC	ENSMUSG00000020549.15	novel	3329	24	NA	NA	10	-2	intron_retention	FALSE	canonical	2	12	junction_12	72.8944669078876	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCTTCAGTGTGGGG	NA	False	NA	13	True	AATAAA	-13	NA	64869873	64892424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.14	chr11	+	3373	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	-21	-468	15	1	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGACAACAGTTTGT	NA	False	NA	9	True	AATAAA	-17	NA	64869878	64892894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.15	chr11	+	2900	23	NNC	ENSMUSG00000020549.15	novel	3329	24	NA	NA	16	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	118.069220837147	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	20	True	AATAAA	-20	NA	64869879	64892431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870649_64870732_64870804_64871433_64871499_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.16	chr11	+	3447	23	ISM	ENSMUSG00000020549.15	ENSMUST00000140369.2	3329	24	-34	470	-14	-3	intron_retention	FALSE	canonical	2	12	junction_13	72.1725434847481	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTGCTTCAGTGTGGG	NA	False	NA	12	True	AATAAA	-12	NA	64869882	64892423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121
ES.5153.19	chr11	+	2805	23	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	-11	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	74.6978071746033	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGTGTGGGGTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	64869885	64892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.2	chr11	+	2936	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_18	71.7489584835784	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCAGTGTGGGGTCTTCT	NA	False	NA	19	True	AATAAA	-19	NA	64869866	64892430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889318_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.20	chr11	+	2760	25	NNC	ENSMUSG00000020549.15	novel	2771	25	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_18	89.180518783844	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTGACAACAGTTTGTA	NA	False	NA	10	True	AATAAA	-18	NA	64869889	64892895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889318_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
ES.5153.21	chr11	+	2930	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	73.5070177841277	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	20	True	AATAAA	-20	NA	64869894	64892431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889297_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.22	chr11	+	4930	24	NNC	ENSMUSG00000020549.15	novel	2771	25	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	91.2901024083748	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTCTTGACAACAGTTT	NA	False	NA	7	True	AATAAA	-15	NA	64869896	64892892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886527_64887327_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64891267_64891820_64892040_64892657
ES.5153.23	chr11	+	3359	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	1	7	intron_retention	TRUE	non_canonical	0	0	junction_23	72.9357901828932	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGTTTGTACATATAT	NA	False	NA	17	True	AATAAA	-25	NA	64869898	64892902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891271_64891826
ES.5153.26	chr11	+	3601	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	4	-721	4	252	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAATATATCATGTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	64869903	64893147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.27	chr11	+	3397	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	5	-3	intron_retention	FALSE	canonical	3	4	junction_2	72.9153379120987	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACTCTTGACAACAGT	NA	False	NA	5	True	AATAAA	-13	NA	64869904	64892890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870649_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.28	chr11	+	2824	23	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.5609324286392	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGTGTGGGGTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	64869904	64892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.29	chr11	+	2911	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	72.9357901828932	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCAGTGTGGGGTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	64869905	64892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891790
ES.5153.3	chr11	+	3038	23	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	5	0	intron_retention	FALSE	canonical	2	12	junction_13	72.7359653895996	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	False	NA	15	True	AATAAA	-15	NA	64869868	64892426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.30	chr11	+	4582	23	NIC	ENSMUSG00000020549.15	novel	3329	24	NA	NA	6	-2	intron_retention	FALSE	canonical	2	12	junction_13	72.8333884927706	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCTTCAGTGTGGGG	NA	False	NA	13	True	AATAAA	-13	NA	64869905	64892424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883181_64883264_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.31	chr11	+	2988	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	42	-259	6	259	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCATGTATAGGTATAT	NA	False	NA	NA	False	ATTAAA	-26	NA	64869905	64893154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
ES.5153.32	chr11	+	3209	23	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	7	-2	intron_retention	FALSE	canonical	3	305	junction_17	22.911480755578	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCTTCAGTGTGGGG	NA	False	NA	13	True	AATAAA	-13	NA	64869906	64892424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.36	chr11	+	2913	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	14	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	99.2237928049575	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	20	True	AATAAA	-20	NA	64869930	64892431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870649_64870732_64870804_64871432_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.37	chr11	+	2948	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	36	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.6368753681785	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTGTGGGGTCTTCTG	NA	False	NA	20	True	AATAAA	-20	NA	64869952	64892431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870270_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.38	chr11	+	8584	17	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	152	-2	intron_retention	FALSE	canonical	3	319	junction_3	19.7294196569489	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGCTTCAGTGTGGGG	NA	False	NA	13	True	AATAAA	-13	NA	64870068	64892424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64888833_64889166_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.41	chr11	+	6949	2	NNC	ENSMUSG00000020549.15	novel	475	3	NA	NA	-4986	1030	intron_retention	FALSE	non_canonical	0	0	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAATCATCACCCAGAC	NA	False	NA	NA	False	NA	NA	NA	64886175	64893925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64886527_64887327
ES.5153.5	chr11	+	6403	22	NIC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	7	4	intron_retention	FALSE	canonical	3	305	junction_16	23.1933605324695	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCAGTGTGGGGTCTTCT	NA	False	NA	19	True	AATAAA	-19	NA	64869870	64892430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.7	chr11	+	3398	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	7	1	intron_retention	FALSE	canonical	3	9	junction_18	71.7489584835784	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACAACAGTTTGTAC	NA	False	NA	11	True	AATAAA	-19	NA	64869870	64892896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889318_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ES.5153.8	chr11	+	2763	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	8	0	8	0	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTGACAACAGTTTGTA	NA	False	NA	10	True	AATAAA	-18	NA	64869871	64892895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
ES.5154.1	chr11	+	176	1	Intergenic	novelGene_4057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64933645	64933821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_64933600_64933800
ES.5155.1	chr11	+	4946	1	Intergenic	novelGene_4058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGACAGAGGCTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65022394	65027340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65022400_65027300
ES.5156.1	chr11	+	3099	1	Intergenic	novelGene_4059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAGAATACATAATATG	NA	False	NA	NA	False	CATAAA	-4	NA	65044238	65047337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65044200_65047300
ES.5156.2	chr11	+	4519	1	Intergenic	novelGene_4061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTAGAGCCTGTGCAGC	NA	False	NA	NA	False	NA	NA	NA	65044239	65048758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65044200_65048800
ES.5156.3	chr11	+	3918	1	Intergenic	novelGene_4060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCCTCACAATGACTTG	NA	False	NA	NA	False	AAAAAG	-45	NA	65044239	65048157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65044200_65048200
ES.5157.1	chr11	-	4352	24	NNC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	4035	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	9.77265193782735	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCACATGGTCTTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	65049358	64892864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64901416_64901481_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957129_64957207_64957905_64957983_64965262_64965368_64965996_64966037_65026045_65026275_65049074
ES.5157.10	chr11	-	4082	21	NNC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.01420613660517	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGGCACATGGTCTTG	NA	False	NA	-2	True	ATTAAA	-18	NA	65053785	64892866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64898888_64899267_64900707_64900866_64901416_64901481_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.12	chr11	-	4181	22	NNC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	6.96866976378161	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGGCACATGGTCTT	NA	False	NA	-3	True	ATTAAA	-17	NA	65053779	64892867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929176_64929295_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.14	chr11	-	6602	20	NIC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	26	-1	intron_retention	FALSE	canonical	3	13	junction_16	3.48483060152565	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTGGCACATGGTCTT	NA	False	NA	-3	True	ATTAAA	-17	NA	65053761	64892867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_64894277_64896279_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.16	chr11	-	4010	20	NIC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.70367039332382	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGGCACATGGTCT	NA	False	NA	-4	True	ATTAAA	-16	NA	65053779	64892868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_64894277_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.18	chr11	-	3914	22	NNC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	18	-270	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.2811954816802	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTTTAATTTGAGCC	NA	False	NA	NA	False	NA	NA	NA	65053769	64893136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64898888_64899267_64900707_64900866_64901416_64901481_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929176_64929295_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.19	chr11	-	2379	13	NNC	ENSMUSG00000033389.17	novel	2256	7	NA	NA	8	21336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.8414585839246	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTTGAAACTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	65053779	64920964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64921974_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.2	chr11	-	3911	20	NNC	ENSMUSG00000033389.17	novel	3982	21	NA	NA	4052	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.16253719419116	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	65049341	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966032_65049070
ES.5157.20	chr11	-	2505	7	ISM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	22	49438	22	-2	5prime_fragment	FALSE	canonical	3	13	junction_3	3.77123616632825	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGTTACTTGTATGCA	NA	False	NA	NA	False	NA	NA	NA	65053765	64942302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.5	chr11	-	4070	21	FSM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	3	1	3	0	multi-exon	FALSE	canonical	3	13	junction_17	3.6779749863206	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	65053784	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.6	chr11	-	7348	2	NIC	ENSMUSG00000033389.17	novel	3982	21	NA	NA	49006	0	intron_retention	FALSE	canonical	3	22	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	64901654	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_64899267_64900707
ES.5157.7	chr11	-	4017	22	NNC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	4055	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.02970674907811	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	65049338	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64901416_64901481_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65049082
ES.5157.8	chr11	-	5883	20	NIC	ENSMUSG00000033389.17	novel	4074	21	NA	NA	21	0	intron_retention	FALSE	canonical	3	13	junction_16	3.71341805944476	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	65053766	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ES.5157.9	chr11	-	3081	16	NNC	ENSMUSG00000033389.17	novel	3391	18	NA	NA	18345	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.6987018942591	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCACATGGTCTTGT	NA	False	NA	-1	True	ATTAAA	-19	NA	64932315	64892865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64901416_64901481_64902696_64902731_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929230_64929295_64929441_64929570_64929976_64930059_64932267
ES.5158.1	chr11	+	180	1	Intergenic	novelGene_4062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATCCATCAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	65295582	65295762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65295600_65295800
ES.5159.1	chr11	+	4532	1	Intergenic	novelGene_4063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-36	NA	65614317	65618849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_65614300_65618800
ES.516.1	chr1	-	197	1	Antisense	novelGene_ENSMUSG00000026039.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTTTAATTTGTA	NA	False	NA	NA	False	AATAAA	-6	NA	58065246	58065049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_58065000_58065200
ES.5160.1	chr11	-	3746	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-49	-2	-49	2	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTGGTTCTTTTCTTT	NA	False	NA	1	True	ATTAAA	-44	NA	65679172	65579066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.11	chr11	-	3683	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-87	99	-87	-99	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGATTTTCTGCAGTCA	NA	False	NA	-6	True	AATAAA	-25	NA	65679210	65579167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.12	chr11	-	3641	15	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	24	-105	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	120.540555458336	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTAATCTGATTTTCTG	NA	False	NA	-12	True	AATAAA	-19	NA	65679087	65579173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65579960_65580031_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65677304_65677342_65677417_65677507_65678961
ES.5160.13	chr11	-	3679	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-57	-106	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAATCTGATTTTCT	NA	False	NA	-13	True	AATAAA	-18	NA	65679180	65579174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ES.5160.15	chr11	-	3436	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-24	-108	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGTAATCTGATTTT	NA	False	NA	-15	True	AATAAA	-16	NA	65679147	65579176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
ES.5160.18	chr11	-	3775	13	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-13	-109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	107.870389047845	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTTGTAATCTGATTT	NA	False	NA	-16	True	AATAAA	-15	NA	65679136	65579177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65634148_65634292_65647094_65647198_65666558_65666592_65678961
ES.5160.19	chr11	-	4769	13	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	5098	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	107.003212568595	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTCTTGTAATCTGAT	NA	False	NA	-18	True	AATAAA	-13	NA	65674013	65579179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65671622_65672260_65673336
ES.5160.2	chr11	-	7872	8	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	3	2	intron_retention	FALSE	canonical	3	30	junction_6	73.4029972140103	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTGGTTCTTTTCTTT	NA	False	NA	1	True	ATTAAA	-44	NA	65679108	65579066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
ES.5160.20	chr11	-	3274	9	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	3	-111	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	105.162300160276	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTCTTGTAATCTGAT	NA	False	NA	-18	True	AATAAA	-13	NA	65679108	65579179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65610309_65610430_65647094_65647198_65678961
ES.5160.21	chr11	-	3834	13	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-33	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	105.352450796784	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTCTTGTAATCTGAT	NA	False	NA	-18	True	AATAAA	-13	NA	65679156	65579179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65671622_65671807_65678961
ES.5160.22	chr11	-	3943	11	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	0	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.8332191291097	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTCTTGTAATCTGAT	NA	False	NA	-18	True	AATAAA	-13	NA	65679123	65579179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65581631_65582553_65582600_65584247_65584756_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.23	chr11	-	3401	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-12	306	-12	-306	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGGATATTGCCTTA	NA	False	NA	NA	False	TATAAA	-18	NA	65679135	65579374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.24	chr11	-	3480	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-58	-306	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGGGATATTGCCTTA	NA	False	NA	NA	False	TATAAA	-18	NA	65679181	65579374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ES.5160.25	chr11	-	3297	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-12	-307	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	81.4861951498534	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAGGGATATTGCCTT	NA	False	NA	NA	False	TATAAA	-17	NA	65679135	65579375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65678961
ES.5160.26	chr11	-	4496	3	ISM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	92679	309	1396	-309	3prime_fragment	FALSE	canonical	3	228	junction_1	19.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGCAGGGATATTGCC	NA	False	NA	NA	False	TATAAA	-15	NA	65586444	65579377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_65581631_65582553_65582600_65584247
ES.5160.27	chr11	-	3057	8	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	17	-309	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	95.7219613127052	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGCAGGGATATTGCC	NA	False	NA	NA	False	TATAAA	-15	NA	65679094	65579377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.28	chr11	-	3234	11	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-1	-309	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	97.1464873271288	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGCAGGGATATTGCC	NA	False	NA	NA	False	TATAAA	-15	NA	65679113	65579377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65666558_65666592_65678961
ES.5160.29	chr11	-	3217	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-9	-312	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATGTGCAGGGATATT	NA	False	NA	NA	False	TATAAA	-12	NA	65679132	65579380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
ES.5160.3	chr11	-	3795	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-66	1	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTGGTTCTTTTCTT	NA	False	NA	0	True	ATTAAA	-43	NA	65679189	65579067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ES.5160.30	chr11	-	4529	9	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-8	302	intron_retention	FALSE	canonical	0	0	junction_8	81.5072849504877	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTTCTTTGTCC	NA	False	NA	-2	True	ATTAAA	-14	NA	65679131	65580856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65678961
ES.5160.31	chr11	-	1920	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	-13	1788	-13	302	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTTCTTTGTCC	NA	False	NA	-2	True	ATTAAA	-14	NA	65679136	65580856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ES.5160.32	chr11	-	4656	11	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	1	302	intron_retention	FALSE	canonical	3	50	junction_9	82.0034145630534	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTGTTCTTTGTCC	NA	False	NA	-2	True	ATTAAA	-14	NA	65679122	65580856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ES.5160.33	chr11	-	1989	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-50	301	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATGTGTTCTTTGTC	NA	False	NA	-3	True	ATTAAA	-13	NA	65679173	65580857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ES.5160.34	chr11	-	4271	1	Intergenic	novelGene_4064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGCAGCTAATGACTAA	NA	False	NA	NA	False	NA	NA	NA	65665517	65661246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_65661200_65665500
ES.5160.4	chr11	-	3532	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-14	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGTTTCTGGTTCTTTT	NA	False	NA	-3	True	ATTAAA	-40	NA	65679137	65579070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
ES.5160.6	chr11	-	3527	11	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	1	-25	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	97.1464873271288	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGGAGAGTTATCTCC	NA	False	NA	-26	True	ATTAAA	-17	NA	65679122	65579093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65666558_65666592_65678961
ES.5160.8	chr11	-	3720	11	NNC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	3	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	77.3211484653455	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATACAGGAGAGTTATC	NA	False	NA	-29	True	ATTAAA	-14	NA	65679108	65579096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626257_65647090_65647198_65678961
ES.5160.9	chr11	-	3567	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	-3	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	81.4861951498534	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATACAGGAGAGTTATC	NA	False	NA	-29	True	ATTAAA	-14	NA	65679126	65579096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65678961
ES.5161.1	chr11	+	2048	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	5	217	5	-217	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGGCCTCCTATTTTG	NA	False	NA	16	True	AATAAA	-17	NA	65698005	65719847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ES.5161.2	chr11	+	3316	7	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	23	1074	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	16.6699996667333	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTCTATTATAGTTT	NA	False	NA	NA	False	NA	NA	NA	65698023	65721139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712758_65712841_65713653_65713765_65718867
ES.5161.3	chr11	+	2231	7	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	10.077477638554	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	14	True	AATAAA	-20	NA	65698036	65720064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
ES.5161.4	chr11	+	7573	6	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	17	junction_4	10.3807514178888	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	14	True	AATAAA	-20	NA	65698043	65720064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65712841_65713653_65713765_65718867
ES.5161.7	chr11	+	2813	5	NIC	ENSMUSG00000018347.17	novel	2302	8	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_4	20.8851023459307	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	14	True	AATAAA	-20	NA	65698061	65720064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_65698891_65705190_65705678_65706743_65706952_65707314_65707407_65718867
ES.5161.8	chr11	+	2467	8	NNC	ENSMUSG00000018347.17	novel	2302	8	NA	NA	-3	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.8185647866863	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTTGTTCACTGTGT	NA	False	NA	25	True	AATAAA	-31	NA	65698066	65720075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_65698088_65698655_65698891_65705190_65705678_65706726_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ES.5161.9	chr11	+	2176	6	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	7119	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.3328735577513	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCCTTGTAGCTGCCT	NA	False	NA	13	True	AATAAA	-19	NA	65705188	65720063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_65705678_65706748_65706952_65707314_65707407_65712758_65712841_65713650_65713765_65718867
ES.5162.1	chr11	+	179	1	Intergenic	novelGene_4066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	66412188	66412367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_66412200_66412400
ES.5163.1	chr11	-	7962	8	NNC	ENSMUSG00000053930.14	novel	7252	6	NA	NA	-701	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.349927106111883	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGTGTCTTAAAGTA	NA	False	NA	NA	False	AATAAA	-19	NA	66417491	66102552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_66108849_66110712_66110866_66115761_66115819_66123884_66123960_66265984_66266081_66393477_66393639_66416134_66417154_66417386
ES.5163.2	chr11	-	3840	6	FSM	ENSMUSG00000053930.14	ENSMUST00000123454.8	7252	6	-1045	4457	-876	1290	multi-exon	FALSE	canonical	0	0	junction_1	0.4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCTCTGGGGACTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	66417666	66107007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_66108849_66110712_66110866_66115761_66115819_66265984_66266081_66393477_66393639_66416134
ES.5163.3	chr11	-	177	1	Intergenic	novelGene_4065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATTGGGAA	NA	False	NA	NA	False	NA	NA	NA	66215276	66215099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_66215100_66215300
ES.5163.4	chr11	-	2358	4	NNC	ENSMUSG00000053930.14	novel	7252	6	NA	NA	-765	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGTGGCATTTGTGGC	NA	False	NA	NA	False	AATAAA	-12	NA	66417555	66265071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_66266081_66393477_66393639_66416134_66417154_66417386
ES.5163.5	chr11	-	4745	2	NNC	ENSMUSG00000053930.14	novel	7252	6	NA	NA	-705	-133612	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTTGGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	66417495	66399570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_66402955_66416134
ES.5164.1	chr11	+	171	1	Intergenic	novelGene_4067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATATCCTG	NA	False	NA	NA	False	NA	NA	NA	66589544	66589715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_66589500_66589700
ES.5165.1	chr11	-	204	1	Intergenic	novelGene_4068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTGTGAATTTCCT	NA	False	NA	NA	False	NA	NA	NA	66649402	66649198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_66649200_66649400
ES.5166.1	chr11	+	154	1	Intergenic	novelGene_4069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	66782782	66782936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_66782800_66782900
ES.5167.1	chr11	+	4222	2	FSM	ENSMUSG00000048070.5	ENSMUST00000123434.3	4200	2	-13	-9	-13	9	multi-exon	FALSE	canonical	3	13	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGTGTTTTTCCTGGG	NA	False	NA	12	True	AATAAA	-22	NA	66802793	66820711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66802969_66816664
ES.5167.2	chr11	+	4553	1	Genic_Genomic	ENSMUSG00000048070.5	novel	NA	NA	NA	NA	-10	-13353	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAGGAAGGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	66802796	66807349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_66802800_66807300
ES.5167.3	chr11	+	4295	3	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCAGAAGTGTGTTT	NA	False	NA	4	True	AATAAA	-14	NA	66802819	66820703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66802969_66814342_66814450_66816664
ES.5167.4	chr11	+	4243	3	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGTTCAGAAGTGTGTT	NA	False	NA	3	True	AATAAA	-13	NA	66802855	66820702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66802969_66803449_66803542_66816664
ES.5167.5	chr11	+	1170	2	FSM	ENSMUSG00000048070.5	ENSMUST00000123434.3	4200	2	54	2976	54	-2976	multi-exon	FALSE	canonical	3	13	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGCAATATGCAGGCTA	NA	False	NA	NA	False	AATATA	-13	NA	66802860	66817726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66802969_66816664
ES.5167.6	chr11	+	4144	2	NNC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	11003	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTCAGAAGTGTGTTT	NA	False	NA	4	True	AATAAA	-14	NA	66813809	66820703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66813915_66816664
ES.5168.1	chr11	-	907	2	Antisense	novelGene_ENSMUSG00000048070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGTATATATGCATCA	NA	False	NA	-4	True	NA	NA	NA	66804942	66787381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_66788193_66804846
ES.5168.2	chr11	-	1543	1	Intergenic	novelGene_4070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTAGTTGGGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	66793305	66791762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_66791800_66793300
ES.5169.1	chr11	+	180	1	Intergenic	novelGene_4071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAGATATG	NA	False	NA	NA	False	NA	NA	NA	66880709	66880889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_66880700_66880900
ES.517.1	chr1	+	4466	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	-20	160	-14	-160	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAGCCAGGCAGTGGT	NA	False	NA	99	True	NA	NA	NA	58152274	58239697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.10	chr1	+	4840	34	NIC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-9	-259	intron_retention	FALSE	canonical	3	19	junction_6	6.35641726163728	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTGTGAAGAATTTCT	NA	False	NA	0	True	ATTAAA	-10	NA	58152335	58239598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.11	chr1	+	4710	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	41	-145	-9	145	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCTGCAGCACAAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	58152335	58240002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.12	chr1	+	4978	26	ISM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	41	26517	-9	1934	5prime_fragment	FALSE	canonical	3	19	junction_6	4.5740135548553	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTTTGTAATTGTAT	NA	False	NA	NA	False	AATGAA	-11	NA	58152335	58213340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279
ES.517.13	chr1	+	1569	8	FSM	ENSMUSG00000064294.13	ENSMUST00000162011.3	1568	8	-8	7	-8	-7	multi-exon	FALSE	canonical	3	19	junction_6	6.53405521487387	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAATGGATGTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	58152336	58178274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374
ES.517.14	chr1	+	5106	26	ISM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	42	26388	-8	2063	5prime_fragment	FALSE	canonical	3	19	junction_6	4.5740135548553	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTAGTGCGTTTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	58152336	58213469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279
ES.517.15	chr1	+	5109	26	NNC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-7	2061	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	7.00788127753317	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGTTAGTGCGTTTT	NA	False	NA	NA	False	TATAAA	-14	NA	58152337	58213467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191706_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279
ES.517.16	chr1	+	4144	34	NNC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-6	-5796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	8.03916035252151	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGGATGTCTTCTTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	58152338	58234061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166869_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784
ES.517.17	chr1	+	4902	35	NNC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-6	-148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.02121969515384	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGGTGGTGCGTGCCTG	NA	False	NA	111	True	NA	NA	NA	58152338	58239709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58152472_58154029_58154576_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.18	chr1	+	2748	17	NIC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-11222	-249	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	10.2893679956545	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTCTGTGCTGAGTC	NA	False	NA	10	True	ATTAAA	-20	NA	58197560	58239608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.2	chr1	+	6002	34	NIC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	20	-251	intron_retention	FALSE	canonical	3	19	junction_6	6.38092888563461	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTCTGTGCTGAG	NA	False	NA	8	True	ATTAAA	-18	NA	58152316	58239606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.3	chr1	+	6217	35	NNC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	20	1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	8.04103876985243	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAACAAAAAAAA	NA	False	NA	NA	False	AATAAA	-45	NA	58152316	58241508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215650_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.4	chr1	+	5014	26	NNC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-23	1468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.02407289256027	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGCTGGGCTGTTTTACC	NA	False	NA	NA	False	AATAAA	-17	NA	58152321	58212874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58152472_58154029_58154576_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279
ES.517.6	chr1	+	4067	33	NIC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-10	-253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	8.27358135498165	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGAATTTCTGTGCTG	NA	False	NA	6	True	ATTAAA	-16	NA	58152334	58239604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.7	chr1	+	7370	34	NIC	ENSMUSG00000064294.13	novel	4606	35	NA	NA	-9	-249	intron_retention	FALSE	canonical	3	19	junction_6	6.29224018147571	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTTCTGTGCTGAGTC	NA	False	NA	10	True	ATTAAA	-20	NA	58152335	58239608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.8	chr1	+	5122	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	41	-557	-9	557	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCCTTCAGTCCAACC	NA	False	NA	NA	False	AATGAA	-16	NA	58152335	58240414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.517.9	chr1	+	6085	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	41	-1520	-9	1520	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTCTTGCTTGTTTGCT	NA	False	NA	NA	False	AAAACA	-12	NA	58152335	58241377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ES.5170.1	chr11	+	3863	1	Genic_Genomic	ENSMUSG00000085926.2	novel	NA	NA	NA	NA	6252	575	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGAGTTGGTTTTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	66899163	66903026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_66899200_66903000
ES.5171.1	chr11	+	1801	2	ISM	ENSMUSG00000050270.13	ENSMUST00000079077.12	1147	7	3	7196	3	-7196	intron_retention	FALSE	canonical	3	21	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	3921	False	NA	NA	False	NA	NA	NA	66915982	66918420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66916098_66916734
ES.5171.2	chr11	+	1596	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	5	-4	5	4	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGGGAGAATTACT	3923	False	NA	NA	False	NA	NA	NA	66915984	66926142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ES.5171.3	chr11	+	2459	1	NIC	ENSMUSG00000050270.13	novel	1147	7	NA	NA	6	-7172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGGTCACTTGGTGG	3924	False	NA	NA	False	NA	NA	NA	66915985	66918444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66916000_66918400
ES.5171.4	chr11	+	6647	4	NIC	ENSMUSG00000050270.13	novel	1597	6	NA	NA	16	4	intron_retention	FALSE	canonical	3	15	junction_2	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGGGAGAATTACT	3934	False	NA	NA	False	NA	NA	NA	66915995	66926142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66916098_66916734_66922012_66923006_66923067_66924934
ES.5171.5	chr11	+	2188	2	ISM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	6107	-4	6107	4	3prime_fragment	FALSE	canonical	3	26	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGGGGAGAATTACT	NA	False	NA	NA	False	NA	NA	NA	66922086	66926142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66923067_66924934
ES.5172.1	chr11	+	4207	1	Antisense	novelGene_ENSMUSG00000020910.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66933570	66937777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_66933600_66937800
ES.5172.2	chr11	+	3838	1	Antisense	novelGene_ENSMUSG00000020910.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAATGGATCAATG	NA	False	NA	NA	False	NA	NA	NA	66933570	66937408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_66933600_66937400
ES.5172.3	chr11	+	1581	2	Antisense	novelGene_ENSMUSG00000020910.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	66933570	66937814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_66934088_66936750
ES.5173.1	chr11	+	1809	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-56	659	-56	-418	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTTTGCTTCTGTGAAG	NA	False	NA	20	True	AATAAA	-32	NA	66943439	66955739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.10	chr11	+	5906	3	NIC	ENSMUSG00000069844.13	novel	2186	6	NA	NA	13	-422	intron_retention	FALSE	canonical	3	281	junction_1	20.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGGCTTTGCTTCTGT	NA	False	NA	16	True	AATAAA	-28	NA	66943508	66955735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66943743_66944600_66949269_66954731
ES.5173.11	chr11	+	3676	5	ISM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	1117	-1523	12	25	3prime_fragment	FALSE	canonical	3	241	junction_1	29.3342802877453	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTATTTATGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	66944612	66957921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.2	chr11	+	3640	5	NNC	ENSMUSG00000069844.13	novel	2186	6	NA	NA	-35	-434	intron_retention	FALSE	canonical	3	21	junction_1	122.456114588043	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACTTGGACAAGCATGG	NA	False	NA	4	True	AATAAA	-16	NA	66943460	66955723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66943743_66944597_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.3	chr11	+	2282	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-17	147	-17	94	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCTATCTCCTTTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	66943478	66956251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.4	chr11	+	2415	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-15	12	-15	-12	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTGGTACTTACATG	NA	False	NA	2	True	AATAAA	-20	NA	66943480	66956386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.5	chr11	+	4307	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	-12	-1883	-12	385	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGCAATGTGCGCCAA	NA	False	NA	NA	False	TATAAA	-28	NA	66943483	66958281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.7	chr11	+	1751	7	NNC	ENSMUSG00000069844.13	novel	2412	6	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	109.193126564308	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTGGTACTTACATG	NA	False	NA	2	True	AATAAA	-20	NA	66943500	66956386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731_66955458_66956101
ES.5173.8	chr11	+	1649	5	NIC	ENSMUSG00000069844.13	novel	2412	6	NA	NA	9	-422	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	131.074406349981	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGGCTTTGCTTCTGT	NA	False	NA	16	True	AATAAA	-28	NA	66943504	66955735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66943743_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ES.5173.9	chr11	+	4054	6	NNC	ENSMUSG00000069844.13	novel	2412	6	NA	NA	13	155	intron_retention	FALSE	non_canonical	0	0	junction_4	116.090654231941	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGACGGGAAGAACTA	NA	False	NA	NA	False	AAGAAA	-29	NA	66943508	66958051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949150_66949269_66954731
ES.5174.1	chr11	-	1483	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-39	-161	-15	25	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGGGCTGTGTTTGGCC	NA	False	NA	NA	False	AATAAA	-35	NA	66943435	66928705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ES.5174.11	chr11	-	2685	2	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-26	11115	-2	-7274	5prime_fragment	FALSE	canonical	3	79	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAACAACCAACCA	NA	False	NA	NA	False	NA	NA	NA	66943422	66939981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_66942605_66943360
ES.5174.2	chr11	-	4348	3	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-5	6	intron_retention	FALSE	canonical	3	79	junction_2	7.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGGCATATACTCCTGA	NA	False	NA	NA	False	AATAAA	-16	NA	66943401	66928724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_66932934_66942506_66942605_66943360
ES.5174.3	chr11	-	1523	5	NNC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	29	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	42.5227880083138	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGGCATATACTCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	66943367	66928725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943232
ES.5174.4	chr11	-	2144	2	FSM	ENSMUSG00000020910.17	ENSMUST00000136013.2	486	2	-1438	-220	-1438	-8	multi-exon	FALSE	canonical	3	109	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGTATTCTGTTTG	NA	False	NA	-6	True	CATAAA	-20	NA	66932791	66928874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_66929272_66931044
ES.5174.5	chr11	-	4480	3	NIC	ENSMUSG00000020910.17	novel	1531	5	NA	NA	-263	-8	intron_retention	FALSE	canonical	3	79	junction_2	7.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGTATTCTGTTTG	NA	False	NA	-6	True	CATAAA	-20	NA	66943683	66928874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_66932934_66942506_66942605_66943360
ES.5174.6	chr11	-	1601	5	NNC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	85	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	41.6735827593453	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTTAAGTATTCTGTTT	NA	False	NA	-7	True	CATAAA	-19	NA	66943311	66928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66942948
ES.5174.7	chr11	-	1305	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	-36	14	-12	-14	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTACTCTTAAGTATTC	NA	False	NA	-12	True	CATAAA	-14	NA	66943432	66928880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ES.5174.8	chr11	-	1330	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-2588	-16	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	46.4494946749214	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTACTCTTAAGTAT	NA	False	NA	-14	True	CATAAA	-12	NA	66933941	66928882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_66929272_66931044_66931162_66932306_66932934_66933744
ES.5174.9	chr11	-	1189	4	NIC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	-15	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41.2337510083939	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTACTCTTAAGTAT	NA	False	NA	-14	True	CATAAA	-12	NA	66943435	66928882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_66929272_66932306_66932934_66942506_66942605_66943360
ES.5175.1	chr11	-	214	1	Intergenic	novelGene_4072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGGACCATTCCCACAA	NA	False	NA	NA	False	NA	NA	NA	66965389	66965175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_66965200_66965400
ES.5176.1	chr11	+	5578	37	ISM	ENSMUSG00000020908.15	ENSMUST00000007301.14	5992	40	4575	-2	4575	2	3prime_fragment	TRUE	canonical	0	0	junction_1	9.54068610520358	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTTGTGCCTTCC	NA	False	NA	13	True	AATAAA	-24	NA	66973700	66993119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.10	chr11	+	3655	15	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15122	-1	intron_retention	FALSE	canonical	2	13	junction_2	5.09351328171631	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGTTTTGTCTTG	NA	False	NA	5	True	AATAAA	-16	NA	66984247	66993111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.11	chr11	+	2845	17	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	15137	0	15137	0	3prime_fragment	FALSE	canonical	2	11	junction_1	5.51949669354009	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	6	True	AATAAA	-17	NA	66984262	66993112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.12	chr11	+	2926	16	NNC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	15138	0	intron_retention	FALSE	non_canonical	0	0	junction_5	7.07106781186548	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	6	True	AATAAA	-17	NA	66984263	66993112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987698_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.14	chr11	+	6017	10	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15147	-2	intron_retention	FALSE	canonical	3	14	junction_4	4.44999653211129	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	False	NA	4	True	AATAAA	-15	NA	66984272	66993110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.15	chr11	+	1897	11	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15153	0	intron_retention	FALSE	canonical	2	3	junction_1	7.22772439983706	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTCTTGTGCCTT	NA	False	NA	11	True	AATAAA	-22	NA	66984278	66993117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66984584_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.16	chr11	+	1969	12	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	17998	2	17998	-2	3prime_fragment	FALSE	canonical	2	13	junction_1	5.22232967867093	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	False	NA	4	True	AATAAA	-15	NA	66987123	66993110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.17	chr11	+	177	1	Intergenic	novelGene_4073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAATTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	66988313	66988490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_66988300_66988500
ES.5176.2	chr11	+	5607	36	NNC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	4852	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.53635364362745	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTTGTCTTGTGCC	NA	False	NA	9	True	AATAAA	-20	NA	66973977	66993115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66974172_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.3	chr11	+	5599	36	NNC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	5122	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.56421903316134	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTGGTTTGTTTTGTCT	NA	False	NA	3	True	AATAAA	-14	NA	66974247	66993109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66974440_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.4	chr11	+	5311	34	NNC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	5956	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.64921955478933	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	6	True	AATAAA	-17	NA	66975081	66993112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_66975187_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981930_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.5	chr11	+	4368	26	ISM	ENSMUSG00000020908.15	ENSMUST00000007301.14	5992	40	10516	1	10516	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	9.4077414930471	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTGTCTTGTGCCT	NA	False	NA	10	True	AATAAA	-21	NA	66979641	66993116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.6	chr11	+	2885	18	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	12059	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_4	10.1504256988814	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTCTTGTGCCTT	NA	False	NA	11	True	AATAAA	-22	NA	66981184	66993117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.7	chr11	+	3593	16	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15110	0	intron_retention	FALSE	canonical	2	11	junction_1	5.44630353746669	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTCTTGTGCCTT	NA	False	NA	11	True	AATAAA	-22	NA	66984235	66993117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66984413_66984492_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.8	chr11	+	3168	12	NIC	ENSMUSG00000020908.15	novel	6031	41	NA	NA	15110	0	intron_retention	FALSE	canonical	1	1	junction_2	7.37765220555399	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTGTTTTGTCTTGT	NA	False	NA	6	True	AATAAA	-17	NA	66984235	66993112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66985690_66985780_66985908_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5176.9	chr11	+	1841	12	NIC	ENSMUSG00000020908.15	novel	5992	40	NA	NA	15122	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	7.42343842276131	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	False	NA	4	True	AATAAA	-15	NA	66984247	66993110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_66984413_66984492_66984584_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ES.5177.1	chr11	-	1591	1	Antisense	novelGene_ENSMUSG00000057003.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTTTATCGGCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	67150032	67148441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_67148400_67150000
ES.5178.1	chr11	+	180	1	Intergenic	novelGene_4074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTATAGACCAC	NA	False	NA	NA	False	NA	NA	NA	67191493	67191673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_67191500_67191700
ES.5179.1	chr11	+	4131	26	NNC	ENSMUSG00000060180.13	novel	668	4	NA	NA	17451	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.9160608145989	105	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTCTGCTGTGTTTGTT	NA	False	NA	26	True	AATAAA	-22	NA	67235379	67262416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67235500_67235630_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.10	chr11	+	3909	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17711	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	21.3434423906099	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCATGCTCTGCTGTGT	NA	False	NA	21	True	AATAAA	-17	NA	67235639	67262411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.11	chr11	+	4932	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17748	-1	intron_retention	FALSE	canonical	3	52	junction_14	14.9184297536235	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCATGCTCTGCTGTGT	NA	False	NA	21	True	AATAAA	-17	NA	67235676	67262411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.12	chr11	+	3997	24	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17815	-85	17815	1	3prime_fragment	FALSE	canonical	3	52	junction_13	15.2219868837183	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGCTCTGCTGTGTTT	NA	False	NA	23	True	AATAAA	-19	NA	67235743	67262413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.13	chr11	+	4964	1	NIC	ENSMUSG00000060180.13	novel	6062	40	NA	NA	-5963	-5419	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	386	False	NA	NA	False	ATTAAA	-13	NA	67249647	67254611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67249600_67254600
ES.5179.2	chr11	+	4069	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17642	-86	17642	2	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235570	67262414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.3	chr11	+	3848	23	NNC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17688	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	28.5285126331159	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCATGCTCTGCTGTGT	NA	False	NA	21	True	AATAAA	-17	NA	67235616	67262411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67235705_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251325_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67260134_67260231_67261745_67261881_67262313
ES.5179.4	chr11	+	3915	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17691	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_21	20.5284624211406	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235619	67262414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67260134_67260231_67261745_67261881_67262313
ES.5179.5	chr11	+	4208	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17700	-283	17700	199	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATTTGCCTGATTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	67235628	67262611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.6	chr11	+	4032	25	NNC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17700	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_14	20.4419486323806	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235628	67262414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251325_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.7	chr11	+	4109	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17705	-4	intron_retention	FALSE	canonical	3	52	junction_13	14.4806761270463	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATCCATGCTCTGCTG	NA	False	NA	18	True	AATAAA	-14	NA	67235633	67262408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.8	chr11	+	3623	23	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17707	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	21.452474861562	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGCTCTGCTGTGTTTG	NA	False	NA	24	True	AATAAA	-20	NA	67235635	67262414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.5179.9	chr11	+	4078	24	NIC	ENSMUSG00000060180.13	novel	5817	39	NA	NA	17710	-2	intron_retention	FALSE	canonical	3	52	junction_14	14.961450148572	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCCATGCTCTGCTGTG	NA	False	NA	20	True	AATAAA	-16	NA	67235638	67262410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ES.518.1	chr1	-	213	1	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCCAGTGGTATTC	NA	False	NA	NA	False	NA	NA	NA	58189416	58189203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58189200_58189400
ES.5180.1	chr11	+	3456	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	-1	-1514	-1	0	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGGTAATTTGCTTT	1122	False	NA	5	True	ATTAAA	-14	NA	67345915	67575800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ES.5180.2	chr11	+	7358	15	NNC	ENSMUSG00000033066.18	novel	1941	14	NA	NA	0	3959	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	4.0431347708814	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGGCGTTTGCTATG	1123	False	NA	11	True	ATTAAA	-21	NA	67345916	67579759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163_67577784_67577839
ES.5180.3	chr11	+	7061	15	NNC	ENSMUSG00000033066.18	novel	1941	14	NA	NA	22	3684	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	4.0431347708814	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAACTTTTGCTAAAC	1145	False	NA	NA	False	AATAAA	-20	NA	67345938	67579484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163_67577784_67577839
ES.5180.4	chr11	+	3982	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	237	-2278	147	764	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGATTCCAGTCTCCTT	1360	False	NA	NA	False	NA	NA	NA	67346153	67576564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ES.5180.5	chr11	+	2912	14	NNC	ENSMUSG00000033066.18	novel	1479	10	NA	NA	12022	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.16664694275411	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAATGGGTGCTAG	NA	False	NA	-9	True	NA	NA	NA	67358028	67575786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67358184_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ES.5180.6	chr11	+	4737	2	NNC	ENSMUSG00000033066.18	novel	2968	15	NA	NA	1848	3838	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGTAAGTAACGTTGT	3604	False	NA	NA	False	AATAAA	-13	NA	67574845	67579638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67577784_67577839
ES.5181.1	chr11	-	184	1	Intergenic	novelGene_4075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	67405155	67404971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67405000_67405200
ES.5182.1	chr11	+	2341	1	FSM	ENSMUSG00000055134.6	ENSMUST00000068548.5	1417	1	-924	0	-52	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAATCCAAAA	NA	False	NA	NA	False	NA	NA	NA	67812277	67814618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67812300_67814600
ES.5182.2	chr11	+	446	3	NNC	ENSMUSG00000055134.6	novel	3338	2	NA	NA	-50	-589	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTATCCCTCCTCGAT	NA	False	NA	NA	False	NA	NA	NA	67813151	67814029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67813384_67813718_67813789_67813885
ES.5183.1	chr11	-	4501	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-42	3	-42	-3	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATCCTTTCCTTTCCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	67813021	67745351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.11	chr11	-	3202	5	ISM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-15	40585	-15	2131	5prime_fragment	FALSE	canonical	3	16	junction_4	2.69258240356725	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-33	NA	67812994	67785933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.2	chr11	-	4469	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	-25	3	-25	-3	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATCCTTTCCTTTCCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	67813004	67745351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.3	chr11	-	4395	16	NIC	ENSMUSG00000020905.12	novel	4462	15	NA	NA	-19	-166	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	8.2365041127896	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGGACTGAATTACTGAA	NA	False	NA	NA	False	AATAAA	-25	NA	67812998	67745514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67794454_67794535_67795146_67795251_67804579_67804712_67812370
ES.5183.4	chr11	-	4406	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	-125	166	-125	-166	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGGACTGAATTACTGAA	NA	False	NA	NA	False	AATAAA	-25	NA	67813104	67745514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.5	chr11	-	4334	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-38	166	-38	-166	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGGACTGAATTACTGAA	NA	False	NA	NA	False	AATAAA	-25	NA	67813017	67745514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.6	chr11	-	4121	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	-125	466	-125	368	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTCATGCTTGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	67813104	67745814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.7	chr11	-	4020	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	-42	469	-42	365	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCCTTTTCATGCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	67813021	67745817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5183.9	chr11	-	4225	15	NNC	ENSMUSG00000020905.12	novel	4462	15	NA	NA	-29	360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.80073525436772	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTTTTCCTTTTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	67813008	67745822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67787838_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ES.5184.1	chr11	-	2216	14	FSM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	-15	-2	-6	0	multi-exon	TRUE	canonical	0	0	junction_9	5.45557637738374	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTTTCTGTGTCTCAC	NA	False	NA	NA	False	AATAAA	-20	NA	67856483	67815631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_67816095_67817204_67817317_67818134_67818238_67821554_67821707_67822549_67822696_67826649_67826799_67829742_67829914_67830604_67830706_67836178_67836296_67837123_67837224_67840393_67840523_67844306_67844444_67844797_67844998_67856347
ES.5185.1	chr11	+	1650	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	-10	-2	-10	2	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGAGTGTTGTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	67857284	67878435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
ES.5185.10	chr11	+	6189	1	Intergenic	novelGene_4079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCATGCTTATGCTCATG	NA	False	NA	NA	False	NA	NA	NA	67885841	67892030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_67885800_67892000
ES.5185.11	chr11	+	2969	1	Intergenic	novelGene_4083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	3944	False	NA	NA	False	NA	NA	NA	67979478	67982447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_67979500_67982400
ES.5185.12	chr11	+	178	1	Intergenic	novelGene_4085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68042536	68042714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68042500_68042700
ES.5185.2	chr11	+	860	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	266	3268	-10	110	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTACCTTGTTTG	NA	False	NA	18	True	AATAAA	-18	NA	67857284	68094706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ES.5185.3	chr11	+	1346	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	270	2778	-6	600	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGATGACACCTTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	67857288	68095196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ES.5185.4	chr11	+	976	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	5	657	5	-657	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGATTTTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	67857299	67877776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
ES.5185.5	chr11	+	965	9	NNC	ENSMUSG00000020903.14	novel	4394	8	NA	NA	-1	108	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	131.19808497078	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTTGGTGTACCTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	67857304	68094704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67908907_67909035_67911731_67911825_68000102_68000205_68094531
ES.5185.7	chr11	+	4708	2	ISM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	46	-3	20	3	3prime_fragment	FALSE	canonical	3	319	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGGGCCTTCTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	67857351	67865420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_67860698_67864058
ES.5185.8	chr11	+	771	6	NNC	ENSMUSG00000020903.14	novel	4394	8	NA	NA	6772	-5213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	120.722160351776	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATCTAAAGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	67864103	68089383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68089093
ES.5185.9	chr11	+	146	1	Intergenic	novelGene_4078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	67882966	67883112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_67883000_67883100
ES.5186.1	chr11	-	3179	1	Intergenic	novelGene_4076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67869539	67866360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67866400_67869500
ES.5186.2	chr11	-	202	1	Intergenic	novelGene_4077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67869539	67869337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67869300_67869500
ES.5187.1	chr11	-	2111	1	Intergenic	novelGene_4080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACTTCCGTGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67922726	67920615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67920600_67922700
ES.5187.2	chr11	-	186	1	Intergenic	novelGene_4081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACATTAGTAGAGAT	853	False	NA	NA	False	NA	NA	NA	67921321	67921135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67921100_67921300
ES.5188.1	chr11	-	118	1	Intergenic	novelGene_4082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	67976745	67976627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_67976600_67976700
ES.5189.1	chr11	-	2407	1	Intergenic	novelGene_4084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68009756	68007349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68007300_68009800
ES.519.1	chr1	-	5832	1	FSM	ENSMUSG00000089275.3	ENSMUST00000158650.3	108	1	-4431	-1293	-4431	1293	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCCACAGT	NA	False	NA	NA	False	NA	NA	NA	58198678	58192846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58192800_58198700
ES.5190.1	chr11	-	213	1	Intergenic	novelGene_4086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCAGCAGCACATTGTT	NA	False	NA	NA	False	NA	NA	NA	68055858	68055645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68055600_68055900
ES.5190.2	chr11	-	183	2	Antisense	novelGene_ENSMUSG00000020903.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68072780	68055675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68055841_68072762
ES.5190.3	chr11	-	2236	1	Intergenic	novelGene_4087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	68062082	68059846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68059800_68062100
ES.5190.4	chr11	-	181	1	Intergenic	novelGene_4088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	68072782	68072601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68072600_68072800
ES.5191.1	chr11	+	189	1	Intergenic	novelGene_4089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68262270	68262459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68262300_68262500
ES.5191.2	chr11	+	6719	1	Intergenic	novelGene_4090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	68262270	68268989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68262300_68269000
ES.5192.1	chr11	+	272	1	Intergenic	novelGene_4091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAGGACTCACACATG	NA	False	NA	NA	False	NA	NA	NA	68284157	68284429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68284200_68284400
ES.5193.1	chr11	-	5630	7	NIC	ENSMUSG00000020902.13	novel	5874	8	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.3073301445069	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTTTCTTGGTGGTG	NA	False	NA	5	True	AATAAA	-22	NA	68291662	68100188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291554
ES.5193.10	chr11	-	4535	6	NNC	ENSMUSG00000020902.13	novel	5738	7	NA	NA	108992	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	39.7723522060237	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGTCCCAGCCTTT	NA	False	NA	-5	True	AATAAA	-12	NA	68168660	68100198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68168555
ES.5193.11	chr11	-	5720	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-141	159	45	-159	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGTTGTGGATTTTCT	NA	False	NA	NA	False	AATATA	-37	NA	68277793	68100348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
ES.5193.12	chr11	-	4722	7	ISM	ENSMUSG00000020902.13	ENSMUST00000108674.9	5874	8	9	1229	9	-1229	intron_retention	FALSE	canonical	0	0	junction_6	36.3073301445069	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTTGTGGATAAGGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	68291640	68101418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291210
ES.5193.13	chr11	-	1709	4	NNC	ENSMUSG00000020902.13	novel	944	2	NA	NA	30	25152	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6690475583121	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAATGGAATTCAT	NA	False	NA	NA	False	NA	NA	NA	68277808	68251317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68251507_68253683_68253749_68275928_68277011_68277435
ES.5193.14	chr11	-	2817	2	FSM	ENSMUSG00000020902.13	ENSMUST00000135141.2	944	2	-176	-1697	-176	1697	multi-exon	FALSE	canonical	3	99	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTGCCATTTGGTGTG	NA	False	NA	NA	False	AATGAA	-14	NA	68278014	68274772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68277011_68277435
ES.5193.3	chr11	-	6128	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	-395	5	-209	-5	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCCCAGCCTTTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	68278047	68100194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
ES.5193.4	chr11	-	5617	7	NNC	ENSMUSG00000020902.13	novel	5738	7	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	35.9509696979403	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCCAGCCTTTCTT	NA	False	NA	-2	True	AATAAA	-15	NA	68277818	68100195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277716
ES.5193.5	chr11	-	5956	7	ISM	ENSMUSG00000020902.13	ENSMUST00000108674.9	5874	8	-2	6	-2	-6	intron_retention	TRUE	canonical	0	0	junction_6	36.3073301445069	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCCAGCCTTTCTT	NA	False	NA	-2	True	AATAAA	-15	NA	68291651	68100195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291210
ES.5193.6	chr11	-	4520	6	NNC	ENSMUSG00000020902.13	novel	5738	7	NA	NA	108641	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	39.7723522060237	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCCCAGCCTTTCT	NA	False	NA	-3	True	AATAAA	-14	NA	68169011	68100196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68168923
ES.5193.9	chr11	-	5435	7	NNC	ENSMUSG00000020902.13	novel	5738	7	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.3073301445069	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGTCCCAGCCTTT	NA	False	NA	-5	True	AATAAA	-12	NA	68277813	68100198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68276793_68277672
ES.5194.1	chr11	+	4374	19	FSM	ENSMUSG00000020901.14	ENSMUST00000021283.8	4370	19	-4	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	0.684934889218775	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGTCATCTATAGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	68322942	68388675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68323089_68364620_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68381614_68381769_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384980_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68386934
ES.5194.2	chr11	+	863	6	ISM	ENSMUSG00000020901.14	ENSMUST00000021283.8	4370	19	-1	11004	-1	-6485	5prime_fragment	FALSE	canonical	0	0	junction_3	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGTTCCCACAGAGGT	NA	False	NA	NA	False	NA	NA	NA	68322945	68377671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68323089_68364620_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376
ES.5195.1	chr11	+	2332	12	ISM	ENSMUSG00000046207.15	ENSMUST00000060441.7	3237	20	28345	6	-4836	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	1.13545418152698	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTACTGCTTCCGTGTGT	NA	False	NA	NA	False	AATAAA	-12	NA	68422189	68443518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68422411_68423319_68423407_68424291_68424707_68425018_68425110_68426929_68427053_68430724_68430836_68434423_68434512_68434802_68434874_68435545_68435637_68436622_68436742_68442049_68442163_68442716
ES.5195.2	chr11	+	2120	10	ISM	ENSMUSG00000046207.15	ENSMUST00000102613.8	3225	20	30336	9	-2845	-7	3prime_fragment	FALSE	canonical	0	0	junction_4	1.06574033851394	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTACTGCTTCCGTG	NA	False	NA	NA	False	AATAAA	-9	NA	68424180	68443515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68424707_68425018_68425098_68426929_68427053_68430724_68430836_68434423_68434512_68434802_68434874_68435545_68435637_68436622_68436742_68442049_68442163_68442716
ES.5196.1	chr11	-	159	1	Intergenic	novelGene_4092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1769	False	NA	NA	False	NA	NA	NA	68449597	68449438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68449400_68449600
ES.5197.1	chr11	-	177	1	Intergenic	novelGene_4093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	68473194	68473017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68473000_68473200
ES.5198.1	chr11	-	153	1	Intergenic	novelGene_4094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	68503128	68502975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68503000_68503100
ES.5199.1	chr11	-	274	1	Intergenic	novelGene_4095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATGTGTCCTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	68512381	68512107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68512100_68512400
ES.52.1	chr1	+	3722	1	FSM	ENSMUSG00000104226.2	ENSMUST00000194219.2	2095	1	1897	-3524	1897	3524	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTGACTAGTTTGATT	NA	False	NA	NA	False	NA	NA	NA	7669499	7673221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_7669500_7673200
ES.520.1	chr1	+	3249	21	ISM	ENSMUSG00000038242.13	ENSMUST00000040442.6	4973	35	30373	3	164	-3	3prime_fragment	FALSE	canonical	0	0	junction_1	0.99373034571759	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCAAGCCTCTGGTG	1618	False	NA	NA	False	NA	NA	NA	58279928	58307753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58280003_58284218_58284312_58284959_58285130_58285397_58285513_58286364_58286488_58288006_58288104_58289293_58289419_58291223_58291358_58292684_58292773_58293067_58293155_58293298_58293491_58294633_58294862_58296373_58296470_58298200_58298330_58301723_58301799_58302501_58302555_58302992_58303108_58303500_58303567_58304117_58304304_58305786_58305955_58306918
ES.520.2	chr1	+	2520	12	ISM	ENSMUSG00000038242.13	ENSMUST00000040442.6	4973	35	43225	0	13016	0	3prime_fragment	FALSE	canonical	0	0	junction_4	1.16420440680597	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAAGCCTCTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	58292780	58307756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58293155_58293298_58293491_58294633_58294862_58296373_58296470_58298200_58298330_58301723_58301799_58302501_58302555_58302992_58303108_58303500_58303567_58304117_58304304_58305786_58305955_58306918
ES.5200.1	chr11	+	178	1	Intergenic	novelGene_4096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTATTTTCTTATT	441	False	NA	NA	False	NA	NA	NA	68540055	68540233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68540100_68540200
ES.5201.1	chr11	+	135	1	Intergenic	novelGene_4097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAGAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	68550229	68550364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68550200_68550400
ES.5202.1	chr11	-	169	1	Intergenic	novelGene_4098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	68552457	68552288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68552300_68552500
ES.5203.1	chr11	+	7874	41	NIC	ENSMUSG00000020900.16	novel	558	3	NA	NA	-67	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	38.5161005295188	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTCCGCACCTTCTG	NA	False	NA	11	True	AATAAA	-25	NA	68582317	68707458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68582669_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.12	chr11	+	7523	41	NNC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	38.4296028472843	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGCCTGCTCTGTTTAC	NA	False	NA	-77	True	AATAAA	-18	NA	68582936	68707370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676005_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.13	chr11	+	3789	25	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	197	24204	0	2189	5prime_fragment	FALSE	canonical	3	123	junction_6	17.9745190014457	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAACTACCTGGCTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	68582937	68683254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688
ES.5203.15	chr11	+	7413	42	NNC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	38.1593452977309	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATATTTGCGCCTGCTCTG	NA	False	NA	-82	True	AATAAA	-13	NA	68582940	68707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752_68706429_68706513
ES.5203.17	chr11	+	4659	21	NNC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8847313869463	370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATATTTGCGCCTGCTCTG	NA	False	NA	-82	True	AATAAA	-13	NA	68582942	68707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68583009_68678317_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.18	chr11	+	7523	40	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	6892	-6	6892	-2	3prime_fragment	FALSE	canonical	3	123	junction_5	28.1664770134717	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTTCCGCACCTTC	3025	False	NA	9	True	AATAAA	-23	NA	68590033	68707456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.2	chr11	+	7774	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	16	1	16	-1	multi-exon	FALSE	canonical	3	123	junction_6	27.8530855561821	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTTCCGCACCTTCT	NA	False	NA	10	True	AATAAA	-24	NA	68582756	68707457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.21	chr11	+	7061	39	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	28999	83	28999	-3	3prime_fragment	FALSE	canonical	3	123	junction_4	28.5283185352511	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGCGCCTGCTCTGTT	NA	False	NA	-80	True	AATAAA	-15	NA	68612140	68707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.22	chr11	+	175	1	Intergenic	novelGene_4099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGGCTG	5881	False	NA	NA	False	NA	NA	NA	68620100	68620275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68620100_68620300
ES.5203.23	chr11	+	6903	37	NNC	ENSMUSG00000020900.16	novel	558	3	NA	NA	-32304	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.5675781266485	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGCCTGCTCTGTTTAC	NA	False	NA	-77	True	AATAAA	-18	NA	68641953	68707370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68642086_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.24	chr11	+	7053	30	NIC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	-20711	-1	intron_retention	FALSE	canonical	3	134	junction_4	28.2801931081708	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGCCTGCTCTGTTTA	NA	False	NA	-78	True	AATAAA	-17	NA	68653546	68707369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.25	chr11	+	6328	32	NNC	ENSMUSG00000020900.16	novel	7759	41	NA	NA	-20594	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.6455235985339	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGACTCTGCTTCCGC	NA	False	NA	3	True	AATAAA	-17	NA	68653663	68707450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68653760_68655061_68655181_68655866_68656020_68659024_68659101_68661734_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.26	chr11	+	6241	30	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	72722	-2	-18394	2	3prime_fragment	FALSE	canonical	3	134	junction_2	27.7434312693457	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGCTTCCGCAC	NA	False	NA	5	True	AATAAA	-19	NA	68655863	68707452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.28	chr11	+	4168	8	NIC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	-14555	-1901	intron_retention	FALSE	canonical	3	145	junction_1	21.4666328642992	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCAGTTAGCTTCCTGC	NA	False	NA	NA	False	TATAAA	-31	NA	68659702	68679164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68661884_68662697_68662813_68673931_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163
ES.5203.29	chr11	+	5661	27	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	79549	81	-11567	-1	3prime_fragment	FALSE	canonical	3	141	junction_2	25.8476705141086	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGCCTGCTCTGTTTA	NA	False	NA	-78	True	AATAAA	-17	NA	68662690	68707369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.3	chr11	+	4341	28	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	152	17840	-11	8553	5prime_fragment	FALSE	canonical	3	123	junction_6	18.9430595779256	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTCTTTCTCATTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	68582892	68689618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075
ES.5203.30	chr11	+	5657	27	NNC	ENSMUSG00000020900.16	novel	558	3	NA	NA	-1726	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.4088857372168	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCTGCTTCCGCACC	NA	False	NA	6	True	AATAAA	-20	NA	68672531	68707453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68672566_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.31	chr11	+	5804	26	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	90608	-2	-508	2	3prime_fragment	FALSE	canonical	3	141	junction_1	25.2632222806197	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGACTCTGCTTCCGCAC	NA	False	NA	5	True	AATAAA	-19	NA	68673749	68707452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.32	chr11	+	4647	26	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	90695	1068	-421	-988	3prime_fragment	FALSE	canonical	3	141	junction_1	25.2632222806197	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCTCTCATTTCCTG	NA	False	NA	NA	False	NA	NA	NA	68673836	68706382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.34	chr11	+	5463	25	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	91036	-6	-80	-2	3prime_fragment	FALSE	canonical	3	142	junction_8	24.0710392495953	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGCTTCCGCACCTTC	NA	False	NA	9	True	AATAAA	-23	NA	68674177	68707456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.35	chr11	+	5058	22	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	93235	82	2119	-2	3prime_fragment	FALSE	canonical	3	142	junction_5	25.1455626250019	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCGCCTGCTCTGTTT	NA	False	NA	-79	True	AATAAA	-16	NA	68676376	68707368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.37	chr11	+	4546	19	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	97786	82	6670	-2	3prime_fragment	FALSE	canonical	3	142	junction_2	24.490108862534	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCGCCTGCTCTGTTT	NA	False	NA	-79	True	AATAAA	-16	NA	68680927	68707368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.38	chr11	+	4702	18	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	98085	1	6969	-1	3prime_fragment	FALSE	canonical	3	142	junction_1	22.9040423442968	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGACTCTGCTTCCG	NA	False	NA	2	True	AATAAA	-16	NA	68681226	68707449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.39	chr11	+	4408	18	NNC	ENSMUSG00000020900.16	novel	558	3	NA	NA	7612	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.0276740023956	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGACTCTGCTTCCGC	NA	False	NA	3	True	AATAAA	-17	NA	68681869	68707450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68681915_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.4	chr11	+	3121	22	ISM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	157	28968	-6	-2575	5prime_fragment	FALSE	canonical	3	123	junction_6	18.9467567630118	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	68582897	68678490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163
ES.5203.40	chr11	+	5281	17	NNC	ENSMUSG00000020900.16	novel	1811	2	NA	NA	7618	-4	intron_retention	FALSE	canonical	0	0	junction_1	51.5673103816749	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTGCGCCTGCTCTGT	NA	False	NA	-81	True	AATAAA	-14	NA	68681875	68707366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68681915_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68703904_68705207_68705381_68705752
ES.5203.41	chr11	+	4280	17	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	99545	85	8429	-5	3prime_fragment	FALSE	canonical	3	161	junction_6	19.5103137788709	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATATTTGCGCCTGCTCTG	NA	False	NA	-82	True	AATAAA	-13	NA	68682686	68707365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.42	chr11	+	5812	16	NNC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	13928	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.4210827017655	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTCTGCTTCCGCACC	NA	False	NA	6	True	AATAAA	-20	NA	68688185	68707453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68688303_68689075_68689283_68689645_68691505_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.43	chr11	+	3277	14	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	106085	405	-13026	-325	3prime_fragment	FALSE	canonical	3	161	junction_3	19.8169134622826	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTTAATGTATTAAGTT	NA	False	NA	NA	False	AATATA	-16	NA	68689226	68707045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.44	chr11	+	3546	13	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	108496	83	-10615	-3	3prime_fragment	FALSE	canonical	3	161	junction_2	20.5998584137529	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGCGCCTGCTCTGTT	NA	False	NA	-80	True	AATAAA	-15	NA	68691637	68707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.45	chr11	+	3445	12	ISM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	109254	83	-9857	-3	3prime_fragment	FALSE	canonical	3	161	junction_1	20.8187772840603	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGCGCCTGCTCTGTT	261	False	NA	-80	True	AATAAA	-15	NA	68692395	68707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.46	chr11	+	2953	2	FSM	ENSMUSG00000020900.16	ENSMUST00000139059.2	1811	2	-1145	3	-1145	-3	multi-exon	FALSE	canonical	3	223	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGCGCCTGCTCTGTT	NA	False	NA	-80	True	AATAAA	-15	NA	68704042	68707367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68705381_68705752
ES.5203.5	chr11	+	6320	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	157	1314	-6	-1226	multi-exon	FALSE	canonical	3	123	junction_6	27.8530855561821	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATGTATTCATCAA	NA	False	NA	23	True	ATTAAA	-24	NA	68582897	68706144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5203.7	chr11	+	5531	33	NNC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	1	-7576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	36.2913557200609	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGTGGTTGATGTTTC	NA	False	NA	NA	False	NA	NA	NA	68582907	68696269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676187_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452
ES.5203.9	chr11	+	7158	40	NIC	ENSMUSG00000020900.16	novel	7791	41	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	38.8974443486629	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGCGCCTGCTCTGTTT	NA	False	NA	-79	True	AATAAA	-16	NA	68582907	68707368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68583009_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ES.5204.1	chr11	+	2679	1	Antisense	novelGene_ENSMUSG00000018736.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCAGACATGTAATTCA	8729	False	NA	NA	False	NA	NA	NA	68713235	68715914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_68713200_68715900
ES.5205.1	chr11	+	159	1	Intergenic	novelGene_4100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATGAATGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	68719689	68719848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68719700_68719800
ES.5206.1	chr11	+	169	1	Intergenic	novelGene_4101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGCCTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	68722625	68722794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68722600_68722800
ES.5207.1	chr11	+	1798	1	Intergenic	novelGene_4102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAGATGAATGCATCAC	NA	False	NA	NA	False	NA	NA	NA	68727797	68729595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68727800_68729600
ES.5208.1	chr11	-	7461	9	NNC	ENSMUSG00000018736.15	novel	1653	8	NA	NA	-24	44120	intron_retention	FALSE	canonical	0	0	junction_1	70.054331593414	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATATTTCCCCAACAC	NA	False	NA	NA	False	NA	NA	NA	68743891	68668139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68674521_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.10	chr11	-	3273	1	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	15199	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTC	NA	False	NA	NA	False	AATAAA	-9	NA	68715547	68712274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68712300_68715500
ES.5208.12	chr11	-	2465	11	NNC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	40	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.1594270815526	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTC	NA	False	NA	NA	False	AATAAA	-9	NA	68743921	68712274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68713492_68716181_68716285_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.14	chr11	-	2890	10	NNC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	87.6978539090149	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	AATAAA	-7	NA	68743867	68712276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743183
ES.5208.15	chr11	-	3005	7	NIC	ENSMUSG00000018736.15	novel	1653	8	NA	NA	-43	1431	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	79.576832195195	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACCAAACCAAAAACA	NA	False	NA	NA	False	NA	NA	NA	68743910	68718697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68720893_68724179_68724272_68726975_68727150_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.16	chr11	-	201	1	Intergenic	novelGene_4103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTATTTTAGGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	68731635	68731434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68731400_68731600
ES.5208.17	chr11	-	194	1	Intergenic	novelGene_4104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	68731919	68731725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68731700_68731900
ES.5208.2	chr11	-	2612	2	Antisense	novelGene_ENSMUSG00000020900.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGTCCCTGTTGTATCT	NA	False	NA	NA	False	CATAAA	-28	NA	68676820	68672218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68674521_68676510
ES.5208.3	chr11	-	5511	9	NNC	ENSMUSG00000018736.15	novel	1653	8	NA	NA	-23	33771	intron_retention	FALSE	canonical	0	0	junction_1	70.054331593414	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTTAAATGTATGGTTC	NA	False	NA	NA	False	AATAAA	-36	NA	68743890	68678488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68682921_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.4	chr11	-	4245	9	NNC	ENSMUSG00000018736.15	novel	1653	8	NA	NA	-19	32509	intron_retention	FALSE	canonical	0	0	junction_1	70.054331593414	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGCCTCCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	68743886	68679750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68682921_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.5	chr11	-	3626	1	Antisense	novelGene_ENSMUSG00000020900.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGAGCCGGGCGCGGT	NA	False	NA	NA	False	NA	NA	NA	68708288	68704662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68704700_68708300
ES.5208.6	chr11	-	2393	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743972	68712259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.7	chr11	-	2416	10	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	74.7099742130432	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743960	68712259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ES.5208.8	chr11	-	2280	10	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	87.6978539090149	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68762663	68712259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68762606
ES.5208.9	chr11	-	1477	5	NNC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.9132988810101	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743866	68712259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68713322_68732930_68732995_68734646_68734801_68736152_68736251_68743767
ES.5209.1	chr11	-	176	1	Intergenic	novelGene_4105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGGAGCAGGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	68776786	68776610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68776600_68776800
ES.521.1	chr1	+	3557	27	NNC	ENSMUSG00000079554.3	novel	5771	36	NA	NA	11750	-25493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.319485533189157	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTCTTTTCTTTTTT	NA	False	NA	NA	False	TTTAAA	-10	NA	58329234	58393925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58329302_58331356_58331438_58333459_58333605_58335021_58335115_58338921_58339074_58339773_58339868_58342685_58342796_58343587_58343773_58344362_58344550_58346508_58346602_58348017_58348188_58349139_58349255_58351433_58351557_58361937_58362035_58369928_58370054_58371701_58371836_58373838_58373927_58375758_58375846_58376493_58376686_58378617_58378846_58382814_58382911_58385383_58385513_58388211_58388287_58389395_58389449_58390313_58390429_58393320_58393387_58393468
ES.5210.1	chr11	+	639	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-66	-47	-66	47	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTTCTGTGTCAGTC	NA	False	NA	10	True	NA	NA	NA	68792342	68795407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ES.5210.10	chr11	+	693	4	NIC	ENSMUSG00000060938.15	novel	657	4	NA	NA	0	6	combination_of_known_junctions	FALSE	canonical	3	269	junction_1	7467.32754515741	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTGGTGTTTTCCAA	NA	False	NA	-31	True	ATTAAA	-20	NA	68792435	68795366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68792639_68793095_68793269_68794004_68794146_68795190
ES.5210.11	chr11	+	2183	2	NIC	ENSMUSG00000060938.15	novel	606	4	NA	NA	5	0	intron_retention	FALSE	canonical	3	17193	junction_1	0	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	False	NA	32	True	ATTAAA	-13	NA	68792440	68795359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68793269_68794004
ES.5210.12	chr11	+	1863	2	FSM	ENSMUSG00000060938.15	ENSMUST00000134403.2	636	2	-1227	0	-1	0	multi-exon	FALSE	canonical	3	14740	junction_1	0	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	False	NA	32	True	ATTAAA	-13	NA	68792451	68795359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68794146_68795190
ES.5210.2	chr11	+	1107	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-33	-548	-33	548	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTGGTGATAAGATTT	NA	False	NA	NA	False	AATACA	-11	NA	68792375	68795908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ES.5210.3	chr11	+	2964	1	Genic_Genomic	ENSMUSG00000060938.15	novel	NA	NA	NA	NA	-17	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	842	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTCCTGTCTTGTGTG	NA	False	NA	28	True	ATTAAA	-9	NA	68792391	68795355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_68792400_68795400
ES.5210.4	chr11	+	1183	3	NIC	ENSMUSG00000060938.15	novel	606	4	NA	NA	-10	2	intron_retention	FALSE	canonical	3	14740	junction_2	1226.5	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTTGTGTGGTGTTTT	NA	False	NA	35	True	ATTAAA	-16	NA	68792398	68795362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68793269_68794004_68794146_68795190
ES.5210.7	chr11	+	508	4	NNC	ENSMUSG00000060938.15	novel	526	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	1507	junction_1	6889.44518004816	842	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	False	NA	32	True	ATTAAA	-13	NA	68792414	68795359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68792451_68793106_68793269_68794004_68794146_68795190
ES.5210.8	chr11	+	696	4	NNC	ENSMUSG00000060938.15	novel	526	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7593.00890439503	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCTTGTGTGGTGT	NA	False	NA	32	True	ATTAAA	-13	NA	68792414	68795359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68792451_68792918_68793269_68794004_68794146_68795190
ES.5210.9	chr11	+	555	4	NNC	ENSMUSG00000060938.15	novel	526	4	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7593.00890439503	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGTCTTGTGTGGTG	NA	False	NA	31	True	ATTAAA	-12	NA	68792420	68795358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68792451_68793052_68793269_68794004_68794146_68795190
ES.5211.1	chr11	-	214	1	Intergenic	novelGene_4106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGGCAGTGGTGGTGC	NA	False	NA	32	True	AAGAAA	-3	NA	68801930	68801716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68801700_68801900
ES.5212.1	chr11	-	177	1	Intergenic	novelGene_4107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAAGAATGTT	8202	False	NA	NA	False	NA	NA	NA	68817117	68816940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68816900_68817100
ES.5213.1	chr11	+	197	1	Intergenic	novelGene_4108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTCAAGTCTTTTATA	NA	False	NA	NA	False	NA	NA	NA	68828006	68828203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68828000_68828200
ES.5214.1	chr11	-	170	1	Intergenic	novelGene_4109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAAAGAA	6819	False	NA	NA	False	NA	NA	NA	68831929	68831759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68831800_68831900
ES.5215.10	chr11	-	3214	16	NNC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	401	357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	3.86781592116274	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGGCTACTTTCTT	6386	False	NA	NA	False	ATTAAA	-16	NA	68847905	68834995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847798
ES.5215.11	chr11	-	3231	17	NNC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	27	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.89661311269158	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTGAGGGCTACT	6012	False	NA	NA	False	ATTAAA	-11	NA	68848279	68835000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842561_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5215.12	chr11	-	3756	10	ISM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	15	5072	15	3	5prime_fragment	FALSE	canonical	2	6	junction_9	2.49443825784929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6000	False	NA	NA	False	NA	NA	NA	68848291	68839054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5215.2	chr11	-	4433	17	FSM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	-58	-3	-58	1	multi-exon	FALSE	canonical	2	6	junction_4	3.00974978195863	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTCTAAAAACACAGTTT	5927	False	NA	1	True	NA	NA	NA	68848364	68833979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5215.3	chr11	-	3027	17	NNC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.01121474743001	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTGGTCTAAAAACACAG	6016	False	NA	-2	True	NA	NA	NA	68848275	68833982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68834342_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5215.4	chr11	-	4230	16	NIC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	5	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	3.51125175527032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGCAGTGGTCTAAAAA	5990	False	NA	-7	True	NA	NA	NA	68848301	68833987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68848186
ES.5215.5	chr11	-	3882	15	NNC	ENSMUSG00000052921.14	novel	4123	15	NA	NA	185	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.56928507104257	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGCAGTGGTCTAAAAA	8576	False	NA	-7	True	NA	NA	NA	68845715	68833987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837914_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243
ES.5215.6	chr11	-	4528	16	NIC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	17	-6	intron_retention	FALSE	canonical	2	6	junction_4	2.9992591677872	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGCAGTGGTCTAAAA	6002	False	NA	-8	True	NA	NA	NA	68848289	68833988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5215.7	chr11	-	3348	17	NNC	ENSMUSG00000052921.14	novel	4372	17	NA	NA	17	360	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	3.95087015731978	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGGGCTACTTTCTTTGC	6002	False	NA	NA	False	ATTAAA	-19	NA	68848289	68834992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844309_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ES.5216.1	chr11	+	3684	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	-4	-1852	-4	3	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAGAGTGTTCTTTT	5554	False	NA	NA	False	ATTAAA	-20	NA	68858952	68865194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
ES.5216.2	chr11	+	3827	4	ISM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	-2	-1851	-2	2	intron_retention	FALSE	canonical	3	33	junction_2	4.54606056566195	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTAGAGTGTTCTTT	5556	False	NA	NA	False	ATTAAA	-19	NA	68858954	68865193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494
ES.5216.3	chr11	+	1831	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	-2	-1	-2	1	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTGTCTTATGTTTAC	5556	False	NA	7	True	CATAAA	-19	NA	68858954	68863343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
ES.5217.2	chr11	-	1016	4	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-31	1	intron_retention	FALSE	canonical	3	482	junction_2	50.8876758710354	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGTGCCTTCAAATC	7205	False	NA	-4	True	AATAAA	-20	NA	68864700	68863311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68863568_68863768_68863855_68863942_68864384_68864467
ES.5217.3	chr11	-	1025	4	FSM	ENSMUSG00000032892.15	ENSMUST00000132093.8	967	4	-65	7	-11	-3	multi-exon	FALSE	canonical	3	482	junction_1	54.6036221834738	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAATTTCTGTGCCTTC	7225	False	NA	-9	True	AATAAA	-15	NA	68864680	68863316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68863855_68863942_68864100_68864266_68864384_68864467
ES.5217.4	chr11	-	880	5	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	243.939029267561	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAATTTCTGTGCC	7225	False	NA	-12	True	AATAAA	-12	NA	68864680	68863319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68863568_68863709_68863855_68863942_68864100_68864266_68864384_68864467
ES.5217.5	chr11	-	732	6	NNC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	224.128891488804	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAATTTCTGTGCC	7204	False	NA	-12	True	AATAAA	-12	NA	68864701	68863319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467_68864562_68864671
ES.5217.7	chr11	-	757	5	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.801472611961	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAATTTCTGTGCC	7268	False	NA	-12	True	AATAAA	-12	NA	68864637	68863319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68863568_68863768_68863855_68863963_68864100_68864266_68864384_68864467
ES.5217.8	chr11	-	859	5	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	-11	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	297.061441456141	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAATTTCTGTGCC	7225	False	NA	-12	True	AATAAA	-12	NA	68864680	68863319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68863568_68863709_68863855_68863963_68864100_68864266_68864384_68864467
ES.5217.9	chr11	-	661	2	NIC	ENSMUSG00000032892.15	novel	428	3	NA	NA	-11	0	intron_retention	FALSE	canonical	1	2	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACATAATTTCTGTGC	7225	False	NA	-13	True	AATAAA	-11	NA	68864680	68863320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68863568_68864266
ES.5218.1	chr11	-	350	1	Intergenic	novelGene_4110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAATAAA	3126	False	NA	NA	False	NA	NA	NA	68868779	68868429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68868400_68868800
ES.5218.2	chr11	-	178	1	Intergenic	novelGene_4111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTTTATTAA	3125	False	NA	NA	False	NA	NA	NA	68868780	68868602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68868600_68868800
ES.5219.1	chr11	+	338	1	Intergenic	novelGene_4112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGATTCA	6148	False	NA	NA	False	NA	NA	NA	68870909	68871247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68870900_68871200
ES.522.1	chr1	+	3289	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	-203	790	-203	-790	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTCTTTTTATTCCCAC	454	False	NA	33	True	AATAAA	-28	NA	58431853	58445722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.10	chr1	+	5149	10	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1694	junction_9	96.5528065073431	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTACTGTGTCTGTGCTTT	876	False	NA	13	True	NA	NA	NA	58432275	58446512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.11	chr1	+	4222	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	0	-795	intron_retention	FALSE	canonical	3	1694	junction_10	91.8575527651374	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATCAGTCTTTTTATT	891	False	NA	28	True	AATAAA	-23	NA	58432290	58445717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.13	chr1	+	5595	10	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1694	junction_9	42.7207411966958	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACGTACTGTGTCTGTGC	891	False	NA	10	True	NA	NA	NA	58432290	58446509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58442913_58443390_58443514_58444193
ES.522.14	chr1	+	4884	8	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	234	1872	0	-6	intron_retention	FALSE	canonical	3	1701	junction_6	41.4330046889074	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAGTCTCAAAGGGCAA	891	False	NA	-8	True	ATTAAA	-12	NA	58432290	58444640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499
ES.522.16	chr1	+	1798	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	516.455465586225	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCAATGATTTGTGTG	897	False	NA	3	True	ATTAAA	-23	NA	58432296	58444651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439214_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.17	chr1	+	3609	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	694.477233679531	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACGTACTGTGTCTGTG	897	False	NA	9	True	NA	NA	NA	58432296	58446508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443574_58443675_58444193
ES.522.19	chr1	+	4113	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-1	intron_retention	FALSE	canonical	3	1694	junction_10	89.7839629332544	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	897	False	NA	12	True	NA	NA	NA	58432296	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58443514_58444193
ES.522.2	chr1	+	3867	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	11	-2	11	2	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTCTGTGCTTTAT	668	False	NA	15	True	NA	NA	NA	58432067	58446514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.20	chr1	+	3113	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-794	intron_retention	FALSE	canonical	3	1694	junction_10	88.9638128679296	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATCAGTCTTTTTATTC	897	False	NA	29	True	AATAAA	-24	NA	58432296	58445718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.21	chr1	+	3310	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-804	intron_retention	FALSE	canonical	3	1694	junction_10	89.7839629332544	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTATAGATCAGT	897	False	NA	19	True	AATAAA	-14	NA	58432296	58445708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58443514_58444193
ES.522.22	chr1	+	3627	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	518.737150592628	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	897	False	NA	12	True	NA	NA	NA	58432296	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444201
ES.522.23	chr1	+	5270	9	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	6	-800	intron_retention	FALSE	canonical	3	1694	junction_8	43.6713578904984	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTATAGATCAGTCTTT	897	False	NA	23	True	AATAAA	-18	NA	58432296	58445712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58443514_58444193
ES.522.24	chr1	+	3391	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	8	-805	intron_retention	FALSE	canonical	3	1694	junction_10	91.8740986350342	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTTTTATAGATCAG	899	False	NA	18	True	AATAAA	-13	NA	58432298	58445707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.26	chr1	+	3982	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	10	-801	intron_retention	FALSE	canonical	3	1694	junction_10	90.7733991872068	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTATAGATCAGTCTT	901	False	NA	22	True	AATAAA	-17	NA	58432300	58445711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.28	chr1	+	3341	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	245	290	11	-290	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCAGTTTCTAAGG	902	False	NA	NA	False	NA	NA	NA	58432301	58446222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.29	chr1	+	3620	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	517.599321726024	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACGTACTGTGTCTGTGCT	902	False	NA	11	True	NA	NA	NA	58432301	58446510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439874_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.3	chr1	+	1820	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	199	1857	-27	9	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGATTTGTGTGATAA	856	False	NA	7	True	ATTAAA	-27	NA	58432255	58444655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.30	chr1	+	3610	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	518.216362484925	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACGTACTGTGTCTGT	903	False	NA	8	True	NA	NA	NA	58432302	58446507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58436997_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.32	chr1	+	4697	10	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	15	-802	intron_retention	FALSE	canonical	0	0	junction_7	567.480483158172	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTATAGATCAGTCT	906	False	NA	21	True	AATAAA	-16	NA	58432305	58445710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440480_58442193_58442773_58443514_58444193
ES.522.33	chr1	+	2808	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	19	-807	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	518.737150592628	1378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTAGGTTTTATAGATC	910	False	NA	16	True	AATAAA	-11	NA	58432309	58445705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444201
ES.522.34	chr1	+	3493	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	19	-7	combination_of_known_splicesites	FALSE	canonical	1	11	junction_10	539.934116351245	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACTACGTACTGTGTCT	910	False	NA	6	True	NA	NA	NA	58432309	58446505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58444193
ES.522.36	chr1	+	2691	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	23	-805	combination_of_known_splicesites	FALSE	canonical	1	11	junction_10	539.934116351245	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTTTTATAGATCAG	914	False	NA	18	True	AATAAA	-13	NA	58432313	58445707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58444193
ES.522.37	chr1	+	3741	11	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	319	801	85	-801	3prime_fragment	FALSE	canonical	3	1694	junction_10	89.952265118784	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTATAGATCAGTCTT	976	False	NA	22	True	AATAAA	-17	NA	58432375	58445711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.38	chr1	+	2086	12	FSM	ENSMUSG00000051223.15	ENSMUST00000186949.2	1492	12	-251	-343	87	-13	multi-exon	FALSE	canonical	0	0	junction_1	515.081185930115	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTATTCAAAGTCTCAA	978	False	NA	-15	True	ATTAAA	-5	NA	58432377	58444633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432786_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.39	chr1	+	3765	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	107	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	514.230806461505	1386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	998	False	NA	12	True	NA	NA	NA	58432397	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58432607_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.4	chr1	+	1431	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	202	2243	-24	-21	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCATGTCTCATGTG	859	False	NA	NA	False	AGTAAA	-20	NA	58432258	58444269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.40	chr1	+	3744	12	FSM	ENSMUSG00000051223.15	ENSMUST00000186949.2	1492	12	-31	-2221	-31	-1	multi-exon	FALSE	canonical	0	0	junction_1	515.081185930115	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	1198	False	NA	12	True	NA	NA	NA	58432597	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432786_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.41	chr1	+	4055	11	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	807	-1	235	1	3prime_fragment	FALSE	canonical	3	1694	junction_10	89.952265118784	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	1464	False	NA	14	True	NA	NA	NA	58432863	58446513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.42	chr1	+	3769	12	NNC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	251	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	515.081185930115	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	1480	False	NA	12	True	NA	NA	NA	58432879	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58433093_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.43	chr1	+	6186	10	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	1913	162	1341	-162	3prime_fragment	FALSE	canonical	3	1694	junction_9	93.7863345227325	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACATACTTTACT	2570	False	NA	NA	False	TATAAA	-14	NA	58433969	58446350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.44	chr1	+	171	1	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAATAAGGAAACTA	3218	False	NA	NA	False	NA	NA	NA	58434617	58434788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58434600_58434800
ES.522.45	chr1	+	5265	8	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	3978	-801	intron_retention	FALSE	canonical	3	1694	junction_7	105.511581722345	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTATAGATCAGTCTT	5207	False	NA	22	True	AATAAA	-17	NA	58436606	58445711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58437012_58438162_58439304_58439865_58440002_58440272_58440383_58440499_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.46	chr1	+	1919	5	ISM	ENSMUSG00000051223.15	ENSMUST00000188630.7	1615	10	8208	-885	7870	885	3prime_fragment	FALSE	canonical	3	1694	junction_4	129.120825198726	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCACTGTAGCAAAAAC	9099	False	NA	NA	False	AATAAA	-15	NA	58440498	58445531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.47	chr1	+	3117	2	NIC	ENSMUSG00000051223.15	novel	1615	10	NA	NA	9185	-902	intron_retention	FALSE	canonical	3	1694	junction_1	0	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTCATTAGATTCT	NA	False	NA	-79	True	GATAAA	-16	NA	58441813	58445610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58443514_58444193
ES.522.48	chr1	+	3779	1	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	9307	-798	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1376	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGATCAGTCTTTTT	NA	False	NA	25	True	AATAAA	-20	NA	58441935	58445714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58441900_58445700
ES.522.49	chr1	+	3326	2	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	9878	0	intron_retention	FALSE	canonical	3	1694	junction_1	0	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTACTGTGTCTGTGCTTT	NA	False	NA	13	True	NA	NA	NA	58442506	58446512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58443514_58444193
ES.522.5	chr1	+	2775	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	202	899	-24	-899	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTCATTAGATTCTGTG	859	False	NA	-76	True	GATAAA	-19	NA	58432258	58445613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.50	chr1	+	1779	3	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	10714	805	10142	-805	3prime_fragment	FALSE	canonical	3	1694	junction_2	8.5	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGGTTTTATAGATCAG	NA	False	NA	18	True	AATAAA	-13	NA	58442770	58445707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58442913_58443390_58443514_58444193
ES.522.6	chr1	+	3520	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	202	154	-24	-154	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACTTTACTCAGCATAA	859	False	NA	NA	False	TATAAA	-22	NA	58432258	58446358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.7	chr1	+	3943	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	1694	junction_10	88.9638128679296	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACGTACTGTGTCTGTGCT	859	False	NA	11	True	NA	NA	NA	58432258	58446510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.8	chr1	+	5047	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	1694	junction_10	91.8575527651374	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTACTGTGTCTGTGCTT	860	False	NA	12	True	NA	NA	NA	58432259	58446511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58442193_58442773_58442913_58443390_58443514_58444193
ES.522.9	chr1	+	3159	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	1694	junction_10	91.8575527651374	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAAGTCTCAAAGGGC	875	False	NA	-10	True	ATTAAA	-10	NA	58432274	58444638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58442193_58442773_58442913_58443390_58443514_58444193
ES.5220.1	chr11	+	700	1	Antisense	novelGene_ENSMUSG00000020899.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4997	False	NA	NA	False	NA	NA	NA	68877099	68877799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_68877100_68877800
ES.5221.1	chr11	+	289	1	Intergenic	novelGene_4113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATAAATAAATCTAT	7464	False	NA	NA	False	NA	NA	NA	68879566	68879855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68879600_68879900
ES.5222.1	chr11	+	191	1	Intergenic	novelGene_4116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	9708	False	NA	NA	False	NA	NA	NA	68898307	68898498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68898300_68898500
ES.5223.1	chr11	+	248	1	Intergenic	novelGene_4117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGATCACTGAAAGTGC	NA	False	NA	NA	False	AAAAAG	-45	NA	68899542	68899790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68899500_68899800
ES.5224.1	chr11	+	6310	20	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_17	106.549742587344	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5059	False	NA	18	True	AATAAA	-18	NA	68906709	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68926330_68926497_68926592_68926720_68926853
ES.5224.10	chr11	+	1812	9	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	1	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	178.884564733797	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCTTGGAATATAGAAT	5130	False	NA	NA	False	AATAAA	-16	NA	68906780	68920040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917190_68918429_68918608_68918689_68918891_68919867
ES.5224.101	chr11	+	4146	21	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	37	junction_3	101.236801608901	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGACCTGTGTTCAT	5300	False	NA	12	True	AATAAA	-12	NA	68906950	68927290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.102	chr11	+	3936	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.523248724012	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5300	False	NA	16	True	AATAAA	-16	NA	68906950	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917394_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.104	chr11	+	3828	21	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-9	0	intron_retention	FALSE	canonical	3	37	junction_3	101.044977608984	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5300	False	NA	18	True	AATAAA	-18	NA	68906950	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.106	chr11	+	3952	23	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	148.257126708414	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5300	False	NA	18	True	AATAAA	-18	NA	68906950	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68926330_68926497_68926592_68926720_68926853
ES.5224.108	chr11	+	4038	24	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.792025002514	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5300	False	NA	16	True	AATAAA	-16	NA	68906950	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68912755_68912862_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.109	chr11	+	4921	19	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_12	103.321639123231	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921833_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.11	chr11	+	4066	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	101.322015507225	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5131	False	NA	16	True	AATAAA	-16	NA	68906781	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906941_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.110	chr11	+	4340	21	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-8	0	intron_retention	FALSE	canonical	2	7	junction_20	130.279881409218	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.111	chr11	+	4159	25	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	171.533747084616	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911335_68911492_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.113	chr11	+	4315	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	-2	intron_retention	FALSE	canonical	2	7	junction_22	163.543894327795	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5301	False	NA	16	True	AATAAA	-16	NA	68906951	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.114	chr11	+	4050	24	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_23	147.531573628804	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5301	False	NA	16	True	AATAAA	-16	NA	68906951	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.115	chr11	+	4129	24	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	162.254753135105	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5301	False	NA	16	True	AATAAA	-16	NA	68906951	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918423_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.116	chr11	+	4425	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	102.814323535035	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCATCTCTGAGG	5301	False	NA	20	True	AATAAA	-20	NA	68906951	68927298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926853
ES.5224.117	chr11	+	4019	24	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	124.91766664669	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.118	chr11	+	4030	24	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	147.831125233835	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917190_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.119	chr11	+	3839	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_22	125.268999812602	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGTTCATCTCTGAG	5301	False	NA	19	True	AATAAA	-19	NA	68906951	68927297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.12	chr11	+	4108	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	103.205844219171	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5145	False	NA	18	True	AATAAA	-18	NA	68906795	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918423_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.120	chr11	+	4496	24	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	146.88902489046	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926853
ES.5224.121	chr11	+	4108	25	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	161.582258892766	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5301	False	NA	16	True	AATAAA	-16	NA	68906951	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924591_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.122	chr11	+	4350	22	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-8	0	intron_retention	FALSE	canonical	3	48	junction_2	96.376058599643	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5301	False	NA	18	True	AATAAA	-18	NA	68906951	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.123	chr11	+	4024	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	127.220541249055	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5301	False	NA	16	True	AATAAA	-16	NA	68906951	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926226_68926497_68926592_68926720_68926853
ES.5224.124	chr11	+	3885	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	102.580113823616	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920576_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.125	chr11	+	3748	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	131.441873032891	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924383_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.126	chr11	+	4918	21	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-7	0	intron_retention	FALSE	canonical	3	209	junction_14	56.5445620727582	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.127	chr11	+	4300	21	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_18	104.976473554792	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68926330_68926497_68926592_68926720_68926853
ES.5224.128	chr11	+	3850	21	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-7	0	intron_retention	FALSE	canonical	3	37	junction_3	101.075355552182	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.13	chr11	+	6191	21	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-18	0	intron_retention	FALSE	canonical	3	218	junction_13	54.6235068445811	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5243	False	NA	18	True	AATAAA	-18	NA	68906893	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.130	chr11	+	5581	20	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	109.261433918049	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5302	False	NA	18	True	AATAAA	-18	NA	68906952	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914991_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.132	chr11	+	4527	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_5	153.197233298286	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5306	False	NA	18	True	AATAAA	-18	NA	68906956	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916895_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.134	chr11	+	951	1	Intergenic	novelGene_4119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTATTTATTATTGC	8247	False	NA	NA	False	NA	NA	NA	68909897	68910848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68909900_68910800
ES.5224.135	chr11	+	4149	23	NIC	ENSMUSG00000020898.19	novel	593	5	NA	NA	4211	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	128.467090682516	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	9520	False	NA	18	True	AATAAA	-18	NA	68911170	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68911492_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.136	chr11	+	6898	20	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	4896	0	intron_retention	FALSE	non_canonical	0	0	junction_17	168.912949437083	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68911855	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68912020_68913218_68913441_68913534_68913747_68914987_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926853
ES.5224.137	chr11	+	5999	18	NNC	ENSMUSG00000020898.19	novel	3989	23	NA	NA	-3973	0	intron_retention	FALSE	non_canonical	0	0	junction_15	115.176831099598	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68914524	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926853
ES.5224.138	chr11	+	3417	18	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-3550	0	intron_retention	FALSE	canonical	3	218	junction_9	57.7306117186694	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68914947	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.139	chr11	+	4916	19	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-3294	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	139.161332787559	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68915203	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.14	chr11	+	3773	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	124.980234264927	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5246	False	NA	18	True	AATAAA	-18	NA	68906896	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.140	chr11	+	2748	16	ISM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	11151	0	-424	0	3prime_fragment	FALSE	canonical	3	218	junction_7	60.415082737858	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68918073	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.143	chr11	+	4276	8	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	354	-2	intron_retention	FALSE	canonical	3	209	junction_3	87.5619897033886	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	NA	False	NA	16	True	AATAAA	-16	NA	68920237	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68925606_68925709_68925775_68926330_68926720_68926853
ES.5224.144	chr11	+	2725	10	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	637	0	intron_retention	FALSE	canonical	3	218	junction_3	76.7807524749353	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68920520	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68920639_68921309_68921833_68921925_68922016_68922236_68922431_68924008_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.145	chr11	+	3762	9	NIC	ENSMUSG00000020898.19	novel	3989	23	NA	NA	774	0	intron_retention	FALSE	canonical	3	209	junction_3	83.1564790019395	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68920657	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.146	chr11	+	4816	1	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	419	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	NA	False	NA	16	True	AATAAA	-16	NA	68922478	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68922500_68927300
ES.5224.147	chr11	+	4265	2	NNC	ENSMUSG00000020898.19	novel	530	4	NA	NA	433	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGACCTGTGTTCAT	NA	False	NA	12	True	AATAAA	-12	NA	68922492	68927290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68922949_68923481
ES.5224.148	chr11	+	2919	2	ISM	ENSMUSG00000020898.19	ENSMUST00000162256.8	530	4	-1073	-664	-427	0	intron_retention	FALSE	canonical	3	490	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	68924273	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68925606_68925709
ES.5224.15	chr11	+	5002	21	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-5	0	intron_retention	FALSE	canonical	3	7	junction_15	106.272044771897	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5256	False	NA	18	True	AATAAA	-18	NA	68906906	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.17	chr11	+	3681	22	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	134.098569357972	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5259	False	NA	16	True	AATAAA	-16	NA	68906909	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914991_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.18	chr11	+	3899	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_22	100.765089717546	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5259	False	NA	18	True	AATAAA	-18	NA	68906909	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.19	chr11	+	4401	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	209	junction_14	55.7045575552513	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5263	False	NA	18	True	AATAAA	-18	NA	68906913	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.21	chr11	+	3961	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	94.3531370056657	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5263	False	NA	18	True	AATAAA	-18	NA	68906913	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68921990_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.22	chr11	+	4050	22	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	3	-2	intron_retention	FALSE	canonical	3	48	junction_2	96.3910214954864	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5264	False	NA	16	True	AATAAA	-16	NA	68906914	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.24	chr11	+	4142	24	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	128.042939395042	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5264	False	NA	18	True	AATAAA	-18	NA	68906914	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911335_68911492_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.25	chr11	+	3972	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	3	1	3	-1	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCATCTCTGAGG	5264	False	NA	20	True	AATAAA	-20	NA	68906914	68927298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.26	chr11	+	3678	22	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	130.493794432868	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5266	False	NA	18	True	AATAAA	-18	NA	68906916	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68911942_68913218_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.28	chr11	+	3876	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	123.195143526154	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5270	False	NA	16	True	AATAAA	-16	NA	68906920	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.29	chr11	+	3812	22	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	151.045967684482	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5270	False	NA	18	True	AATAAA	-18	NA	68906920	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926830
ES.5224.32	chr11	+	3891	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	123.313088391278	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5271	False	NA	18	True	AATAAA	-18	NA	68906921	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922246_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.34	chr11	+	4145	24	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_17	145.411845854916	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5273	False	NA	18	True	AATAAA	-18	NA	68906923	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.35	chr11	+	3726	22	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.752120755243	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5273	False	NA	16	True	AATAAA	-16	NA	68906923	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913404_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.36	chr11	+	4347	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	149.054346958106	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGTGTTCATCTCTG	5274	False	NA	17	True	AATAAA	-17	NA	68906924	68927295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917325_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68925890_68926497_68926592_68926720_68926853
ES.5224.37	chr11	+	5021	20	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	6	0	intron_retention	FALSE	canonical	3	48	junction_2	101.474039090884	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5278	False	NA	18	True	AATAAA	-18	NA	68906928	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.38	chr11	+	4018	24	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	143.461211108186	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5278	False	NA	18	True	AATAAA	-18	NA	68906928	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.4	chr11	+	4026	23	NIC	ENSMUSG00000020898.19	novel	3989	23	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	6	junction_1	127.37827603878	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5095	False	NA	18	True	AATAAA	-18	NA	68906745	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906941_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.40	chr11	+	3941	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	102.42410009852	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5281	False	NA	18	True	AATAAA	-18	NA	68906931	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921953_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.41	chr11	+	3942	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_16	96.2792512168433	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5281	False	NA	18	True	AATAAA	-18	NA	68906931	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.42	chr11	+	4456	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	9	0	intron_retention	FALSE	canonical	3	15	junction_10	127.528776528967	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5281	False	NA	18	True	AATAAA	-18	NA	68906931	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.43	chr11	+	4018	24	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	143.099817106643	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5283	False	NA	18	True	AATAAA	-18	NA	68906933	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.44	chr11	+	5082	20	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	15	-4	intron_retention	FALSE	canonical	0	0	junction_5	106.13619536595	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACCTGTGTTCATCT	5287	False	NA	14	True	AATAAA	-14	NA	68906937	68927292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916895_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.45	chr11	+	3918	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_16	121.577382425167	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5287	False	NA	16	True	AATAAA	-16	NA	68906937	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.46	chr11	+	3724	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	125.967835940807	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.47	chr11	+	3907	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	149.71709547572	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911335_68911492_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.49	chr11	+	4424	20	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	15	0	intron_retention	FALSE	canonical	3	7	junction_16	132.490275606151	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5287	False	NA	18	True	AATAAA	-18	NA	68906937	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68926720_68926853
ES.5224.5	chr11	+	4344	24	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_17	127.442725932847	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5098	False	NA	18	True	AATAAA	-18	NA	68906748	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.50	chr11	+	6258	19	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	-11	intron_retention	FALSE	canonical	3	218	junction_12	55.8124062494892	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGACTTTCTGACCTGTG	5289	False	NA	7	True	AATAAA	-7	NA	68906939	68927285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.52	chr11	+	1992	11	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	167.577564130763	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAACTGTAGCTTGGAAT	5289	False	NA	NA	False	AATAAA	-9	NA	68906939	68920033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913436_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867
ES.5224.53	chr11	+	4029	22	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	-6	intron_retention	FALSE	canonical	3	41	junction_15	97.7035870871956	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGACCTGTGTTCAT	5289	False	NA	12	True	AATAAA	-12	NA	68906939	68927290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.56	chr11	+	4208	21	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	-2	intron_retention	FALSE	canonical	2	7	junction_20	131.996060547275	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926945
ES.5224.57	chr11	+	4863	23	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	17	-2	intron_retention	FALSE	canonical	3	10	junction_18	162.238600944299	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924490_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.58	chr11	+	3770	22	NIC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_16	128.284406257693	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.59	chr11	+	3940	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	127.656337468485	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918423_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.6	chr11	+	4158	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	-173	-7	-2	4	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATCTCTGAGGTGCCA	5099	False	NA	25	True	AATAAA	-25	NA	68906749	68927303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.60	chr11	+	3927	23	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	144.967708002977	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918423_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.61	chr11	+	3748	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	-1	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	97.9944697407626	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGTGTTCATCTCTG	5289	False	NA	17	True	AATAAA	-17	NA	68906939	68927295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.62	chr11	+	3821	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	127.098712206804	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915069_68916895_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.63	chr11	+	3684	21	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	131.308834432417	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68926330_68926497_68926592_68926720_68926853
ES.5224.64	chr11	+	3842	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_22	126.21172196088	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926945
ES.5224.65	chr11	+	3866	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	128.522435897106	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918704_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.66	chr11	+	3853	23	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_17	150.332523987975	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5289	False	NA	18	True	AATAAA	-18	NA	68906939	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.67	chr11	+	3750	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	164.955898188296	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5289	False	NA	16	True	AATAAA	-16	NA	68906939	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915069_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.68	chr11	+	3945	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	102.640228609087	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5290	False	NA	18	True	AATAAA	-18	NA	68906940	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918704_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.69	chr11	+	3533	21	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	171.376916473602	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5290	False	NA	16	True	AATAAA	-16	NA	68906940	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913218_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922435_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.7	chr11	+	3861	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	126.634313805961	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5099	False	NA	18	True	AATAAA	-18	NA	68906749	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68911942_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.70	chr11	+	3840	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	147.452814976955	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5290	False	NA	18	True	AATAAA	-18	NA	68906940	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918704_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.71	chr11	+	4758	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_19	133.409468059057	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5291	False	NA	18	True	AATAAA	-18	NA	68906941	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926945
ES.5224.73	chr11	+	4040	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-17	0	intron_retention	FALSE	canonical	3	218	junction_13	54.0710458982915	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5292	False	NA	18	True	AATAAA	-18	NA	68906942	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.74	chr11	+	4069	24	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_17	146.303979584781	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5293	False	NA	16	True	AATAAA	-16	NA	68906943	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.76	chr11	+	4811	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-16	0	intron_retention	FALSE	canonical	1	2	junction_19	104.778375328633	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5293	False	NA	18	True	AATAAA	-18	NA	68906943	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68925890_68926497_68926592_68926720_68926853
ES.5224.77	chr11	+	4396	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	101.706523596811	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5294	False	NA	18	True	AATAAA	-18	NA	68906944	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68925890_68926497_68926592_68926720_68926853
ES.5224.78	chr11	+	3651	20	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1	junction_5	160.423539143597	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5294	False	NA	18	True	AATAAA	-18	NA	68906944	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917325_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592
ES.5224.79	chr11	+	3619	22	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	149.836570076955	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCTGACCTGTGTTCA	5294	False	NA	11	True	AATAAA	-11	NA	68906944	68927289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913218_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.8	chr11	+	4073	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	97.1731967431825	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5099	False	NA	18	True	AATAAA	-18	NA	68906749	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.80	chr11	+	4300	23	NNC	ENSMUSG00000020898.19	novel	3976	23	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	131.165161482677	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5294	False	NA	16	True	AATAAA	-16	NA	68906944	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911942_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68925890_68926497_68926592_68926720_68926853
ES.5224.82	chr11	+	4344	22	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	41	junction_16	98.481601582936	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5294	False	NA	16	True	AATAAA	-16	NA	68906944	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.83	chr11	+	4512	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-15	0	intron_retention	FALSE	canonical	3	218	junction_14	53.5502815404478	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5294	False	NA	18	True	AATAAA	-18	NA	68906944	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68926497_68926592_68926720_68926853
ES.5224.84	chr11	+	5909	21	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-15	0	intron_retention	FALSE	non_canonical	0	0	junction_9	107.556159749221	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5294	False	NA	18	True	AATAAA	-18	NA	68906944	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68919686_68919852_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.85	chr11	+	3828	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-15	1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	103.841214035788	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTGTTCATCTCTGAG	5294	False	NA	19	True	AATAAA	-19	NA	68906944	68927297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.86	chr11	+	3788	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	103.406293668461	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5294	False	NA	16	True	AATAAA	-16	NA	68906944	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68911969_68913314_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.87	chr11	+	3891	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	102.58259213247	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5294	False	NA	18	True	AATAAA	-18	NA	68906944	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68926330_68926497_68926592_68926720_68926853
ES.5224.88	chr11	+	3888	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	101.923981152054	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5295	False	NA	18	True	AATAAA	-18	NA	68906945	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915069_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.9	chr11	+	3895	22	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	130.341171015447	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5130	False	NA	18	True	AATAAA	-18	NA	68906780	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.92	chr11	+	3808	23	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	165.827850595302	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5296	False	NA	18	True	AATAAA	-18	NA	68906946	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68919867_68919938_68920511_68920635_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.93	chr11	+	4550	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	218	junction_14	53.1048251007344	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5296	False	NA	16	True	AATAAA	-16	NA	68906946	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.95	chr11	+	4450	21	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_16	107.299627212773	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5300	False	NA	18	True	AATAAA	-18	NA	68906950	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924867_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.96	chr11	+	4289	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-9	0	intron_retention	FALSE	canonical	3	31	junction_2	99.3938773624556	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5300	False	NA	18	True	AATAAA	-18	NA	68906950	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5224.97	chr11	+	4711	20	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_17	137.008016830769	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5300	False	NA	18	True	AATAAA	-18	NA	68906950	68927296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925833_68925911_68926497_68926592_68926720_68926853
ES.5224.99	chr11	+	3572	21	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	-9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	133.626297935698	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACCTGTGTTCATCTCT	5300	False	NA	16	True	AATAAA	-16	NA	68906950	68927294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68906992_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ES.5225.1	chr11	-	7304	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	1196	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	95.1420568094725	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTCGCATAGATTTT	NA	False	NA	NA	False	NA	NA	NA	68894700	68875326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.10	chr11	-	6559	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-1	526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.604023929619	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGTCCAATGGAAGTG	NA	False	NA	-10	True	AATAAA	-14	NA	68899278	68875996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.101	chr11	-	5480	30	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4014	-532	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_28	116.78926008968	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	68903300	68877817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68903236
ES.5225.102	chr11	-	4983	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	17	-696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	121.358524964803	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTGTAGACCGGCTGG	NA	False	NA	NA	False	NA	NA	NA	68899260	68877981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228
ES.5225.103	chr11	-	5443	27	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	22	-696	intron_retention	FALSE	canonical	0	0	junction_25	125.631428859023	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTGTAGACCGGCTGG	NA	False	NA	NA	False	NA	NA	NA	68899255	68877981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228
ES.5225.104	chr11	-	4437	27	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.520580008753	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGGCTGGCCCTAAAC	NA	False	NA	NA	False	NA	NA	NA	68894700	68878413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879191_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881565_68881722_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.105	chr11	-	4236	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	1	2136	1	130	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTGCATTGCTCATTTT	NA	False	NA	NA	False	NA	NA	NA	68899285	68878658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.107	chr11	-	4734	31	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4014	125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	156.84227392157	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAGCTGCATTGCTC	NA	False	NA	NA	False	NA	NA	NA	68903300	68878663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228_68899524_68900173_68900275_68903231
ES.5225.108	chr11	-	5054	7	NIC	ENSMUSG00000020899.17	novel	5144	16	NA	NA	-837	-1255	intron_retention	FALSE	canonical	3	422	junction_1	27.9861076647365	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGATTCATGGA	NA	False	NA	NA	False	NA	NA	NA	68885994	68880043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68880912_68880995_68881088_68881193_68881986_68882163_68883613_68883741_68884285_68884391_68884791_68885083
ES.5225.109	chr11	-	1559	12	NNC	ENSMUSG00000020899.17	novel	2129	11	NA	NA	20	-1976	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	133.957437424438	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGAGATTATTTTG	NA	False	NA	NA	False	NA	NA	NA	68899257	68885783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68885943_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.11	chr11	-	6782	30	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	2	525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	142.791242316478	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGGTCCAATGGAAGT	NA	False	NA	-11	True	AATAAA	-13	NA	68899284	68875997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228
ES.5225.110	chr11	-	3383	11	FSM	ENSMUSG00000020899.17	ENSMUST00000172987.2	2129	11	-9	-1245	0	1245	multi-exon	FALSE	canonical	3	373	junction_10	40.4914805854269	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGTGTGTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	68899286	68886535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.111	chr11	-	170	1	Intergenic	novelGene_4114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	68890598	68890428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68890400_68890600
ES.5225.112	chr11	-	177	1	Intergenic	novelGene_4115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAATAATAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	68897583	68897406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68897400_68897600
ES.5225.113	chr11	-	531	2	Intergenic	novelGene_4118	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAATAATAAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	68903306	68902331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68902793_68903236
ES.5225.12	chr11	-	6654	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-1	519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.174408938334	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCCAAGTGGTCCAAT	NA	False	NA	-17	True	AATAAA	-7	NA	68899278	68876003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876068_68876284_68879100_68879192_68879517_68880796_68880890_68880986_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.13	chr11	-	6538	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4606	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.014240477006	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGCCAAGTGGTCC	NA	False	NA	-20	True	AATAAA	-4	NA	68894671	68876006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885101_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.15	chr11	-	7148	31	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-7882	516	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.87496820467	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGCCAAGTGGTCC	NA	False	NA	-20	True	AATAAA	-4	NA	68907168	68876006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68907038
ES.5225.18	chr11	-	8333	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4	0	intron_retention	FALSE	canonical	3	373	junction_26	41.9369243185737	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899282	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.19	chr11	-	6348	27	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_13	129.343975141193	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899259	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881565_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68883237_68883480_68883613_68883741_68883865_68884122_68884211_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.2	chr11	-	7110	31	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4025	533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138.289069223372	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGGAAGTGTGTTGTG	NA	False	NA	-3	True	AATAAA	-21	NA	68903311	68875989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68903236
ES.5225.21	chr11	-	6566	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	19	0	intron_retention	FALSE	canonical	3	373	junction_26	42.1165788380033	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899258	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.22	chr11	-	6315	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	96.067505986401	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899285	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883180_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.23	chr11	-	8502	25	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	0	intron_retention	FALSE	canonical	3	385	junction_14	39.8622410796093	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68894700	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.25	chr11	-	6358	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	94.4431081967925	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899274	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879508_68880790_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.26	chr11	-	4979	4	ISM	ENSMUSG00000020899.17	ENSMUST00000152964.3	1421	7	-796	-2266	-320	0	intron_retention	FALSE	canonical	3	422	junction_2	48.297688005397	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68882971	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68879517_68880796_68880912_68880995_68881088_68881193
ES.5225.28	chr11	-	8702	25	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	13	0	intron_retention	FALSE	canonical	3	373	junction_24	43.4208851117626	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899264	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.29	chr11	-	6445	26	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_12	99.1581040560982	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899276	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883613_68883741_68883865_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.3	chr11	-	6607	26	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	5908	-532	5899	532	3prime_fragment	FALSE	canonical	3	385	junction_15	35.9634036209033	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAATGGAAGTGTGTTGT	NA	False	NA	-4	True	AATAAA	-20	NA	68893378	68875990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305
ES.5225.30	chr11	-	5378	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.3880126858041	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899264	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876756_68877728_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.31	chr11	-	7153	23	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	0	intron_retention	FALSE	canonical	3	422	junction_3	38.0504232662897	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68894700	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882595_68882681_68882863_68883005_68883613_68883741_68883865_68884122_68884285_68884391_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.32	chr11	-	6483	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.038372532172	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899285	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881756_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.33	chr11	-	6720	31	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4017	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	156.341524305676	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68903303	68876522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228_68899371_68900173_68900275_68903236
ES.5225.35	chr11	-	3366	7	NNC	ENSMUSG00000020899.17	novel	5144	16	NA	NA	-356	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	190.294216645932	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68881788	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68877763_68877999_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498
ES.5225.36	chr11	-	9962	23	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4015	0	intron_retention	FALSE	canonical	3	3	junction_22	135.476447283633	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68903301	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68883613_68883741_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68903164
ES.5225.37	chr11	-	6339	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	95.4505595994406	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68899270	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884648_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.39	chr11	-	6369	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	96.0300878775906	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68899291	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885089_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.40	chr11	-	3397	7	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	188.35486602569	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68894700	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879364_68891764_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.42	chr11	-	6612	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	2	0	intron_retention	FALSE	canonical	3	373	junction_26	42.1234625200084	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68899284	68876525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.44	chr11	-	6333	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	96.067505986401	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTGTTTTCCGATG	NA	False	NA	-15	True	NA	NA	NA	68899257	68876526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891077_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.46	chr11	-	3222	1	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1684	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTGTTTTCCGATG	NA	False	NA	-15	True	NA	NA	NA	68879748	68876526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68876500_68879700
ES.5225.48	chr11	-	6228	27	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.8280477321148	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCTGTTTTCCGAT	NA	False	NA	-16	True	NA	NA	NA	68899299	68876527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68882196_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.49	chr11	-	6385	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.1858192802053	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCTGTTTTCCGAT	NA	False	NA	-16	True	NA	NA	NA	68899288	68876527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881103_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.50	chr11	-	6231	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	94.5360485311253	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTCTGTTTTCCGAT	NA	False	NA	-16	True	NA	NA	NA	68899284	68876527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882816_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.51	chr11	-	6627	25	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4579	-3	intron_retention	FALSE	canonical	3	385	junction_13	39.7594983410673	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGTCTGTTTTCCGA	NA	False	NA	-17	True	NA	NA	NA	68894698	68876528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.52	chr11	-	6314	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	9	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_24	96.1179830555483	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAATGTCTGTTTTCC	NA	False	NA	-19	True	NA	NA	NA	68899268	68876530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892104_68892572_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.54	chr11	-	8923	22	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-1	-36	intron_retention	FALSE	canonical	3	373	junction_21	39.9498551900406	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTAGTTTTGCTGCTA	NA	False	NA	-50	True	NA	NA	NA	68899278	68876561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879517_68880796_68880912_68880995_68881088_68881193_68881986_68882163_68882320_68882510_68882595_68882681_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.55	chr11	-	6239	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4573	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	95.1420568094725	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGTAGTTTTGCTGCT	NA	False	NA	-51	True	NA	NA	NA	68894704	68876562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882243_68882284_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.56	chr11	-	5889	27	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	4586	428	4577	335	3prime_fragment	FALSE	canonical	3	385	junction_15	38.4410137543424	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATAGCTGAGAGTAAT	NA	False	NA	NA	False	NA	NA	NA	68894700	68876950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.57	chr11	-	6062	25	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	19	14	intron_retention	FALSE	canonical	3	373	junction_24	43.0174383244749	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTGGATTTCTAAATA	NA	False	NA	NA	False	ATTAAA	-26	NA	68899258	68877271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.58	chr11	-	5876	30	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4019	12	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_28	119.208716932227	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGTTGGATTTCTAAA	NA	False	NA	NA	False	ATTAAA	-24	NA	68903305	68877273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899371_68900173_68900275_68903236
ES.5225.6	chr11	-	5609	9	NNC	ENSMUSG00000020899.17	novel	5144	16	NA	NA	1115	529	intron_retention	FALSE	canonical	0	0	junction_1	167.118969599504	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAATGGAAGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	68883987	68875993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881986_68882163_68882320_68882510_68883237_68883480
ES.5225.60	chr11	-	5862	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	9	intron_retention	FALSE	canonical	3	373	junction_26	42.1234625200084	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGCATGTTGGATTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	68899285	68877276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.66	chr11	-	6111	31	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4011	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	154.677460111894	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTAGCATGTTGGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	68903297	68877278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228_68899524_68900173_68900275_68903236
ES.5225.68	chr11	-	5953	26	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	19	7	intron_retention	FALSE	canonical	3	373	junction_25	42.7147936902427	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTAGCATGTTGGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	68899258	68877278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.69	chr11	-	7555	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	17	7	intron_retention	FALSE	canonical	3	373	junction_26	41.9369243185737	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTAGCATGTTGGATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	68899260	68877278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.7	chr11	-	6593	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	527	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.739008145252	755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGTCCAATGGAAGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	68894700	68875995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882243_68882284_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.71	chr11	-	5110	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	19	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.3880126858041	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACTAGCATGTTGGATT	NA	False	NA	NA	False	ATTAAA	-18	NA	68899258	68877279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68877712_68878189_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.72	chr11	-	5202	25	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	98.1032265297913	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGACTAGCATGTTGGA	NA	False	NA	NA	False	ATTAAA	-16	NA	68894700	68877281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879430_68881255_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.73	chr11	-	6307	23	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	4577	2	intron_retention	FALSE	canonical	3	385	junction_11	40.9737115883137	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68894700	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68883237_68883480_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ES.5225.74	chr11	-	7626	26	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	20	2	intron_retention	FALSE	canonical	3	373	junction_25	42.2530661609309	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899257	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.75	chr11	-	4346	21	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-5739	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.842587574056	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68890896	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68877763_68877999_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881722_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834
ES.5225.76	chr11	-	4384	9	NIC	ENSMUSG00000020899.17	novel	5144	16	NA	NA	-1164	2	intron_retention	FALSE	canonical	3	422	junction_3	42.5820898383346	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68883815	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881986_68882163_68882320_68882510_68882595_68882681_68883613_68883741
ES.5225.77	chr11	-	6294	24	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	18	2	intron_retention	FALSE	canonical	3	373	junction_23	44.0392504086928	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899259	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68883237_68883480_68883613_68883741_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.78	chr11	-	5566	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.317916039318	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899257	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879508_68880792_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892075_68892617_68892665_68893305_68893442_68894521_68894699_68898283_68898379_68899228
ES.5225.79	chr11	-	5391	7	NIC	ENSMUSG00000020899.17	novel	5144	16	NA	NA	558	2	intron_retention	FALSE	canonical	3	422	junction_3	47.5558151602468	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68884544	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881986_68882163_68883613_68883741
ES.5225.8	chr11	-	7708	23	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	0	526	intron_retention	FALSE	canonical	0	0	junction_1	104.968905273801	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGTCCAATGGAAGTG	NA	False	NA	-10	True	AATAAA	-14	NA	68899286	68875996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876295_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68883237_68883480_68884285_68884391_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.80	chr11	-	5596	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.334656075283	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899285	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879107_68879214_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.82	chr11	-	6020	30	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4020	2	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_28	116.78926008968	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68903306	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68903236
ES.5225.83	chr11	-	5544	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	95.4373946432754	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899285	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881565_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.84	chr11	-	5337	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.3880126858041	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899248	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68877763_68877999_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.85	chr11	-	8343	27	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4015	2	intron_retention	FALSE	canonical	3	25	junction_25	122.720764724942	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68903301	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899524_68900173_68900275_68903236
ES.5225.87	chr11	-	5831	27	NIC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	2	2	intron_retention	FALSE	canonical	3	373	junction_26	42.1165788380033	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899284	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.88	chr11	-	5721	28	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	96.038372532172	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899284	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881756_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.89	chr11	-	5569	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	94.3880126858041	747	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68899285	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882243_68882284_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5225.9	chr11	-	3481	6	NNC	ENSMUSG00000020899.17	novel	2584	5	NA	NA	175	526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.94960928071	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGTCCAATGGAAGTG	NA	False	NA	-10	True	AATAAA	-14	NA	68881257	68875996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68876087_68876303_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193
ES.5225.92	chr11	-	6197	30	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	-4013	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	119.823314237916	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACTAGCATGTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	68903299	68877283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228_68899708_68900173_68900275_68903236
ES.5225.99	chr11	-	5193	29	NNC	ENSMUSG00000020899.17	novel	6373	28	NA	NA	1	-374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	94.3880126858041	745	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCCGGCTTGTTTGTAGT	NA	False	NA	NA	False	NA	NA	NA	68899285	68877659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882243_68882284_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ES.5226.1	chr11	-	486	1	Antisense	novelGene_ENSMUSG00000020898.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGATACAG	NA	False	NA	NA	False	NA	NA	NA	68911694	68911208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68911200_68911700
ES.5226.2	chr11	-	363	1	Antisense	novelGene_ENSMUSG00000020898.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	68911694	68911331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68911300_68911700
ES.5226.3	chr11	-	154	1	Intergenic	novelGene_4120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	68911695	68911541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68911500_68911700
ES.5227.1	chr11	-	1743	3	Antisense	novelGene_ENSMUSG00000020898.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTTGTAACTGCAGCAC	7159	False	NA	NA	False	AAAACA	-13	NA	68919922	68917895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_68918313_68918429_68919687_68919853
ES.5228.1	chr11	+	120	1	Intergenic	novelGene_4121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68932650	68932770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68932600_68932800
ES.5229.1	chr11	+	138	1	Intergenic	novelGene_4122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACCAAAAGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	68933334	68933472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68933300_68933500
ES.523.1	chr1	-	2728	1	FSM	ENSMUSG00000103839.2	ENSMUST00000194925.2	2623	1	2530	-2635	2530	2635	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGCTCACGTTTAGT	1290	False	NA	NA	False	NA	NA	NA	58422763	58420035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58420000_58422800
ES.523.2	chr1	-	3844	2	Genic_Genomic	ENSMUSG00000103839.2	novel	2623	1	NA	NA	-1252	192	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTATTGGTTAGCTT	NA	False	NA	NA	False	AAAAAG	-4	NA	58426545	58422478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_58423290_58423512
ES.523.3	chr1	-	2852	2	Antisense	novelGene_ENSMUSG00000051223.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTGGTGATGCATG	NA	False	NA	NA	False	NA	NA	NA	58432194	58425317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_58428127_58432151
ES.5230.1	chr11	+	1794	9	NNC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	184.266790279746	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936433	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68936497_68936694_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.10	chr11	+	3512	6	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	581	junction_1	41.6672533292033	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936477	68942490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939471_68939556_68941303_68941725
ES.5230.11	chr11	+	4365	4	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	-10	intron_retention	FALSE	canonical	3	589	junction_2	40.8683523306509	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGAATACTGTGGTG	NA	False	NA	6	True	AATAAA	-16	NA	68936477	68942480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939706_68941127
ES.5230.12	chr11	+	2082	7	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	6	-2	intron_retention	FALSE	canonical	3	581	junction_1	38.2262998470948	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936483	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.13	chr11	+	1999	8	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	6	-4	intron_retention	FALSE	canonical	3	10	junction_1	225.027889427973	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATACTGTGGTGGTCTGA	NA	False	NA	12	True	AATAAA	-22	NA	68936483	68942486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938551_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.14	chr11	+	1816	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	14	1	9	-1	multi-exon	FALSE	canonical	3	35	junction_1	202.492592457107	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGGTGGTCTGAATA	NA	False	NA	15	True	AATAAA	-25	NA	68936486	68942489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.15	chr11	+	4060	4	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-8	-11	intron_retention	FALSE	canonical	3	643	junction_2	8.25967446224258	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATACTGTGGT	NA	False	NA	5	True	AATAAA	-15	NA	68936488	68942479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.16	chr11	+	3401	3	FSM	ENSMUSG00000020897.13	ENSMUST00000149018.2	661	3	-2891	151	7	-151	multi-exon	FALSE	canonical	3	643	junction_2	0.5	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTTGGTACGTGTAT	NA	False	NA	NA	False	NA	NA	NA	68936503	68941412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68939471_68939556_68939706_68941127
ES.5230.17	chr11	+	1998	7	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	7	-12	intron_retention	FALSE	canonical	3	581	junction_1	39.5379564469384	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTTGAATACTGTGG	NA	False	NA	4	True	AATAAA	-14	NA	68936503	68942478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939706_68941127_68941303_68941725
ES.5230.18	chr11	+	5541	5	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	9	-2	intron_retention	FALSE	canonical	3	589	junction_2	36.5991803186902	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936505	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556
ES.5230.19	chr11	+	2531	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	48	-629	10	629	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACGGTTCATAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	68936525	68943119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.2	chr11	+	1996	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	-43	-3	-38	3	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTCTGAATATGCT	NA	False	NA	19	True	AATAAA	-29	NA	68936434	68942493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.21	chr11	+	4090	3	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	50	13	12	-13	intron_retention	FALSE	canonical	3	581	junction_1	54	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTTTTGAATACTGTG	NA	False	NA	3	True	AATAAA	-13	NA	68936527	68942477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68936835_68938610_68938714_68938797
ES.5230.22	chr11	+	2093	6	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	89	-2	intron_retention	FALSE	canonical	3	581	junction_1	35.4491184657672	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936604	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68938714_68938797_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.23	chr11	+	3585	4	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	101	-4	intron_retention	FALSE	canonical	3	581	junction_1	34.4125300177453	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATACTGTGGTGGTCTGA	NA	False	NA	12	True	AATAAA	-22	NA	68936616	68942486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68939471_68939556_68941303_68941725
ES.5230.24	chr11	+	2493	8	NNC	ENSMUSG00000020897.13	novel	879	3	NA	NA	821	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.499988835797	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTTGAATACTGTGG	NA	False	NA	4	True	AATAAA	-14	NA	68937336	68942478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68938020_68938381_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.3	chr11	+	4300	5	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	589	junction_2	35.4286254319865	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936464	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939471_68939556_68939706_68941127
ES.5230.4	chr11	+	2524	6	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	581	junction_1	39.81155611126	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936464	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939471_68939556_68939706_68941127
ES.5230.6	chr11	+	3465	8	NNC	ENSMUSG00000020897.13	novel	1831	9	NA	NA	0	-2	intron_retention	FALSE	canonical	1	3	junction_1	227.458271571122	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936472	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68936497_68936760_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.7	chr11	+	4148	6	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	589	junction_2	32.7572892651391	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936476	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127
ES.5230.8	chr11	+	3865	6	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	589	junction_2	32.6582302031203	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936476	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939471_68939556_68939706_68941127_68941303_68941725
ES.5230.9	chr11	+	3724	7	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	-2	intron_retention	FALSE	canonical	3	589	junction_2	30.4630924234556	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	False	NA	14	True	AATAAA	-24	NA	68936477	68942488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ES.5231.1	chr11	+	1873	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	-13	2	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGAGCCTGTTTTTTT	NA	False	NA	15	True	ATTAAA	-15	NA	68950529	68952402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68950500_68952400
ES.5232.1	chr11	+	813	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	-34	0	-34	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4613	False	NA	NA	False	AATAAA	-19	NA	68961597	68963856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ES.5232.2	chr11	+	1281	2	NNC	ENSMUSG00000020895.15	novel	311	2	NA	NA	2	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGCGTATACTATTTT	4649	False	NA	NA	False	AATAAA	-18	NA	68961633	68963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68962301_68963241
ES.5232.3	chr11	+	747	5	NNC	ENSMUSG00000020895.15	novel	779	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	158.914088425161	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGAGCAAGGCGTAT	4649	False	NA	NA	False	AATAAA	-10	NA	68961633	68963847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963325_68963571
ES.5232.4	chr11	+	994	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	-1	270	-1	-1	multi-exon	FALSE	canonical	3	354	junction_2	22.0655588845805	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAGGCGTATAC	4651	False	NA	NA	False	AATAAA	-12	NA	68961635	68963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
ES.5232.6	chr11	+	1022	3	NIC	ENSMUSG00000020895.15	novel	367	4	NA	NA	15	-1	intron_retention	FALSE	canonical	3	348	junction_2	30	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAGGCGTATAC	4669	False	NA	NA	False	AATAAA	-12	NA	68961653	68963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68962301_68963248_68963346_68963571
ES.5232.7	chr11	+	629	5	NNC	ENSMUSG00000020895.15	novel	311	2	NA	NA	108	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	158.054381464102	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAGGCGTATAC	4885	False	NA	NA	False	AATAAA	-12	NA	68961869	68963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68961955_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ES.5232.8	chr11	+	668	4	ISM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	294	7	164	-1	3prime_fragment	FALSE	canonical	3	348	junction_3	26.9814751264641	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGCAAGGCGTATAC	4941	False	NA	NA	False	AATAAA	-12	NA	68961925	68963849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68962118_68962199_68962301_68963248_68963346_68963571
ES.5233.1	chr11	-	217	1	Intergenic	novelGene_4123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	884	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTACGAAATTATTATTT	7107	False	NA	NA	False	NA	NA	NA	68966745	68966528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68966500_68966700
ES.5234.1	chr11	+	660	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	-2	1547	-2	147	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTGGTCTGTTTGTA	NA	False	NA	3	True	NA	NA	NA	68979313	68981663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ES.5234.2	chr11	+	3332	3	NIC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	124	junction_1	2	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979314	68983210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68979454_68979931_68980716_68980801
ES.5234.3	chr11	+	2182	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	22	1	2	-1	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979337	68983209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ES.5234.4	chr11	+	3374	2	FSM	ENSMUSG00000020894.17	ENSMUST00000149780.2	676	2	6	-2704	6	-5	multi-exon	FALSE	canonical	3	124	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATATGGTGTCCAAAAT	NA	False	NA	13	True	AATAAA	-13	NA	68979353	68983205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68979454_68979931
ES.5234.5	chr11	+	2786	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	20	-1693	8	-1	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979355	68983209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
ES.5234.6	chr11	+	2939	4	NNC	ENSMUSG00000020894.17	novel	1113	4	NA	NA	10	-1	intron_retention	FALSE	canonical	3	15	junction_2	52.3513769319076	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979357	68983209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68979454_68979931_68980053_68980401_68980716_68980801
ES.5234.7	chr11	+	3843	1	NIC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	-6	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATATGGTGTCCAAAAT	NA	False	NA	13	True	AATAAA	-13	NA	68979362	68983205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68979400_68983200
ES.5234.8	chr11	+	2295	5	NNC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	45.3706953881027	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATATGGTGTCCAAAAT	NA	False	NA	13	True	AATAAA	-13	NA	68979375	68983205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68979454_68979931_68980053_68980401_68980716_68980801_68980854_68981475
ES.5234.9	chr11	+	2183	5	NNC	ENSMUSG00000020894.17	novel	2205	5	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.4516100731738	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGTGTCCAAAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	68979375	68983209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980893_68981475
ES.5235.1	chr11	-	123	1	Intergenic	novelGene_4124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68984565	68984442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_68984400_68984600
ES.5236.1	chr11	+	192	1	Intergenic	novelGene_4125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGGCAGAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	68984598	68984790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_68984600_68984800
ES.5237.1	chr11	+	3324	18	FSM	ENSMUSG00000020893.18	ENSMUST00000101004.9	3507	18	20	163	20	-1	multi-exon	FALSE	canonical	3	14	junction_5	5.21177798431451	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGATTCTTCCCCGC	NA	False	NA	11	True	AATAAA	-17	NA	68986062	68997121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
ES.5237.2	chr11	+	3474	17	NIC	ENSMUSG00000020893.18	novel	3507	18	NA	NA	30	-2	intron_retention	FALSE	canonical	3	14	junction_5	5.26634360823522	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGATTCTTCCCCG	NA	False	NA	10	True	AATAAA	-16	NA	68986072	68997120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
ES.5237.3	chr11	+	4656	23	NNC	ENSMUSG00000020893.18	novel	4537	22	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	8.10124467531108	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGACTTTGTGAAATGA	NA	False	NA	NA	False	AATACA	-26	NA	68986075	69000786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994076_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215_68996450_68997278_68997896_68998358_68998546_68998686_68998877_68999186_68999338_68999906
ES.5237.4	chr11	+	3290	18	NNC	ENSMUSG00000020893.18	novel	3507	18	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.50685960814977	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTGTGATTCTTCCC	NA	False	NA	8	True	AATAAA	-14	NA	68986087	68997118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994862_68995029_68995116_68995248_68995459_68995640_68996215
ES.5237.5	chr11	+	3321	18	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	-3	3665	-3	-1	5prime_fragment	FALSE	canonical	3	10	junction_1	5.84636047433339	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGATTCTTCCCCGC	NA	False	NA	11	True	AATAAA	-17	NA	68989770	68997121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
ES.5237.6	chr11	+	4666	23	FSM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	5	0	5	0	multi-exon	FALSE	canonical	2	8	junction_18	7.25181652933985	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGACTTTGTGAAATGA	NA	False	NA	NA	False	AATACA	-26	NA	68989778	69000786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215_68996450_68997278_68997896_68998358_68998546_68998686_68998877_68999186_68999338_68999906
ES.5237.9	chr11	+	4291	4	NIC	ENSMUSG00000020893.18	novel	4537	22	NA	NA	4110	-6	intron_retention	FALSE	canonical	2	9	junction_1	1.24721912892465	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAAAAACCAAAAACC	NA	False	NA	NA	False	AATACA	-8	NA	68995457	69000768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_68998546_68998686_68998877_68999186_68999338_68999906
ES.5238.1	chr11	+	2564	16	NNC	ENSMUSG00000020892.11	novel	3019	15	NA	NA	-374	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	4.27707064862545	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTGTTTTGATGATGA	243	False	NA	22	True	AATAAA	-23	NA	69016347	69039942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69016481_69017310_69017376_69018151_69018357_69019440_69019523_69020391_69020512_69020830_69020957_69023558_69023663_69023854_69024028_69024763_69024908_69024989_69025194_69025282_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
ES.5238.2	chr11	+	3564	10	ISM	ENSMUSG00000020892.11	ENSMUST00000021268.9	3019	15	5102	3	-3144	-3	3prime_fragment	FALSE	canonical	2	3	junction_1	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTTGTTTTGATG	917	False	NA	18	True	AATAAA	-19	NA	69021823	69039938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69023663_69023854_69024028_69024763_69024908_69024989_69025194_69025282_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
ES.5238.3	chr11	+	1790	7	NIC	ENSMUSG00000020892.11	novel	3019	15	NA	NA	-353	-3	intron_retention	FALSE	canonical	2	7	junction_3	2.13437474581095	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCCTTTGTTTTGATG	3708	False	NA	18	True	AATAAA	-19	NA	69024614	69039938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69024908_69024989_69025370_69025831_69026002_69026697_69026820_69033011_69033113_69033672_69033844_69039385
ES.5239.1	chr11	+	586	4	ISM	ENSMUSG00000032807.6	ENSMUST00000036424.3	2431	15	10421	1	10421	-1	3prime_fragment	FALSE	canonical	3	17	junction_3	8.17856276425687	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGTCTGAGAACGTGGG	NA	False	NA	6	True	AATAAA	-17	NA	69058235	69060617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69058304_69059603_69059705_69060043_69060215_69060371
ES.524.1	chr1	-	5540	1	Antisense	novelGene_ENSMUSG00000051223.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACTGGAGCGAGCAGTG	NA	False	NA	NA	False	NA	NA	NA	58446556	58441016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_58441000_58446600
ES.5240.1	chr11	-	178	1	Intergenic	novelGene_4126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTCCCTG	NA	False	NA	NA	False	NA	NA	NA	69073758	69073580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69073600_69073800
ES.5241.1	chr11	+	181	1	Intergenic	novelGene_4127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAGAAGGAAAGGAA	5598	False	NA	NA	False	NA	NA	NA	69079024	69079205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69079000_69079200
ES.5242.1	chr11	+	172	1	Intergenic	novelGene_4128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCTTAAAAAGTA	9533	False	NA	NA	False	NA	NA	NA	69082959	69083131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69083000_69083100
ES.5243.1	chr11	-	211	1	ISM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	13418	283	12959	-283	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACCTCACTTCTTCTCA	NA	False	NA	NA	False	NA	NA	NA	69075251	69075040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69075000_69075300
ES.5243.2	chr11	-	157	2	NNC	ENSMUSG00000020891.12	novel	3226	14	NA	NA	-46253	-335	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	69134922	69075092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69075205_69134877
ES.5243.3	chr11	-	5937	16	ISM	ENSMUSG00000020890.12	ENSMUST00000108664.2	4415	20	4693	-3041	4679	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0.4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTGTGGTGCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	69123169	69108942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69112955_69113843_69113955_69114151_69114238_69114380_69114476_69114594_69114694_69114952_69115128_69115516_69115710_69115795_69115960_69116998_69117148_69118312_69118463_69118868_69119026_69119187_69119395_69120921_69121003_69122357_69122460_69122798_69122902_69123116
ES.5244.1	chr11	-	1111	5	Intergenic	novelGene_4129	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAGAAAAA	NA	False	NA	NA	False	CATAAA	-40	NA	69155258	69148867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69148979_69149506_69149685_69152098_69152607_69152707_69152913_69155149
ES.5245.1	chr11	-	4224	1	Antisense	novelGene_ENSMUSG00000087003.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69186556	69182332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69182300_69186600
ES.5246.1	chr11	+	2213	1	Intergenic	novelGene_4131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAAAAAGTGGGGTTC	NA	False	NA	NA	False	NA	NA	NA	69206986	69209199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69207000_69209200
ES.5247.1	chr11	-	3444	18	NNC	ENSMUSG00000032782.20	novel	750	5	NA	NA	-9	3694	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	39.32897362111	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATCAGCAGGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	69214610	69186618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69186854_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69212181_69212246_69212674_69212760_69213515
ES.5247.10	chr11	-	4201	18	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-92	-4	combination_of_known_junctions	FALSE	canonical	3	88	junction_14	16.2923124929146	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATGTTTAAGAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	69214693	69190316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.11	chr11	-	6499	16	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-21	-4	intron_retention	FALSE	canonical	0	0	junction_13	39.851056029504	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATGTTTAAGAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	69214622	69190316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209867_69210178_69210296_69211643_69211801_69212181_69212760_69213515
ES.5247.12	chr11	-	4510	19	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-108	-4	intron_retention	FALSE	canonical	0	0	junction_10	37.8929616579369	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATGTTTAAGAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	69214709	69190316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69203473_69203631_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.13	chr11	-	3095	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-55	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	35.7288185706482	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATGTTTAAGAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	69214656	69190316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213506_69213779_69214604
ES.5247.14	chr11	-	3785	18	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-48	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	30.6788251310034	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTAATGTTTAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	69214649	69190319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.15	chr11	-	3708	18	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-13	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	30.6230571024119	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69214614	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69212181_69212246_69212674_69212760_69213515
ES.5247.16	chr11	-	4031	17	NIC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	-12	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	31.0986334104893	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69214613	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69213515
ES.5247.2	chr11	-	5754	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-34	3692	intron_retention	FALSE	canonical	0	0	junction_1	45.8793362507533	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACATCAGCAGGCATTT	NA	False	NA	NA	False	NA	NA	NA	69214635	69186620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69186854_69188954_69189013_69189227_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210801_69212181_69212246_69212674_69212760_69213515
ES.5247.20	chr11	-	3151	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-39	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	40.4865149739619	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69214640	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209867_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213506_69213860_69214604
ES.5247.21	chr11	-	1226	8	NNC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	-27	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.6063346856782	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69214628	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69213637_69213779_69214604
ES.5247.22	chr11	-	3958	19	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-97	-9	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	27.2352009876833	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69214698	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213506
ES.5247.23	chr11	-	4680	9	NIC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	278	-9	combination_of_known_junctions	FALSE	canonical	3	104	junction_3	10.1542786548331	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	69205685	69190321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536
ES.5247.24	chr11	-	2230	14	NNC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	494	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	44.1877382654708	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69209799	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69203473_69203550_69205536_69205684_69206015_69206253_69209771
ES.5247.25	chr11	-	3589	16	NNC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	-35	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	32.2231110988509	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214636	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69213506
ES.5247.26	chr11	-	3436	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-79	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.4722744023727	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214680	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515_69214111_69214604
ES.5247.27	chr11	-	3456	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-79	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	28.9080115226542	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214680	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515_69214111_69214584
ES.5247.29	chr11	-	4295	18	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-56	-10	intron_retention	FALSE	canonical	3	88	junction_14	16.0401744763526	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69214657	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.3	chr11	-	3588	18	NNC	ENSMUSG00000032782.20	novel	750	5	NA	NA	-113	3692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1392218457517	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACATCAGCAGGCATTT	NA	False	NA	NA	False	NA	NA	NA	69214714	69186620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69186854_69191068_69191142_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.30	chr11	-	3673	14	NIC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	-784	-10	intron_retention	FALSE	canonical	3	94	junction_13	14.3963341816527	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAATGTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69211682	69190322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69206253_69209771_69209871_69210178_69210296_69210683
ES.5247.31	chr11	-	3773	18	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-22	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	31.0372028133579	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATGTTTAATGTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	69214623	69190323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.32	chr11	-	3418	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-119	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.4722744023727	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGTATAAATGTTTAAT	NA	False	NA	NA	False	AATAAA	-9	NA	69214720	69190328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515_69214111_69214656
ES.5247.33	chr11	-	4821	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-131	-23	intron_retention	FALSE	canonical	3	15	junction_17	27.6087343884661	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAATTATTGTATAAAT	NA	False	NA	NA	False	AATAAA	-2	NA	69214732	69190335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69211801_69212181_69212246_69212674_69212760_69213506
ES.5247.34	chr11	-	3918	19	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-66	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	30.2058779334155	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAATTATTGTATAAAT	NA	False	NA	NA	False	AATAAA	-2	NA	69214667	69190335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212260_69212674_69212760_69213515
ES.5247.35	chr11	-	3259	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-81	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	41.250467973506	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAATTATTGTATAAAT	NA	False	NA	NA	False	AATAAA	-2	NA	69214682	69190335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69198917_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209867_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515_69214060_69214604
ES.5247.36	chr11	-	5547	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	403	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.1215390266591	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAATTATTGTATAAAT	NA	False	NA	NA	False	AATAAA	-2	NA	69214198	69190335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69196913_69199028_69200177_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213506
ES.5247.37	chr11	-	3116	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-30	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	29.2836921517554	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214631	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515_69213860_69214604
ES.5247.38	chr11	-	3374	16	NIC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-26	23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	32.1452260150019	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214627	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.39	chr11	-	6684	14	ISM	ENSMUSG00000032782.20	ENSMUST00000123176.8	3776	18	-56	30	-56	23	intron_retention	FALSE	canonical	3	95	junction_12	13.0374971279363	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214657	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178
ES.5247.4	chr11	-	4413	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	769	3692	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	29.4722744023727	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACATCAGCAGGCATTT	NA	False	NA	NA	False	NA	NA	NA	69213832	69186620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69186857_69189227_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.41	chr11	-	4343	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-18	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	30.5252745694982	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214619	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212432_69212760_69213515
ES.5247.43	chr11	-	4202	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-6	23	intron_retention	FALSE	canonical	0	0	junction_10	45.2502461328831	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214607	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69203473_69203550_69205536_69205684_69206015_69206253_69210178_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.44	chr11	-	2863	19	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-1822	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.8850193527471	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69212720	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69203473_69203631_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674
ES.5247.45	chr11	-	4000	20	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-51	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	36.8984531501708	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAGTAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	69214652	69190342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205216_69205335_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.46	chr11	-	3822	18	NNC	ENSMUSG00000032782.20	novel	3776	18	NA	NA	-56	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	30.9059293759019	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAAGAGTAAATTATT	NA	False	NA	NA	False	NA	NA	NA	69214657	69190343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212267_69213515
ES.5247.47	chr11	-	2144	7	ISM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-38	19078	-38	-3373	5prime_fragment	FALSE	canonical	3	88	junction_3	4.95535624910617	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAAAACCCATCTG	NA	False	NA	NA	False	NA	NA	NA	69214639	69209390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.5	chr11	-	2816	1	Intergenic	novelGene_4130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	7760	False	NA	NA	False	NA	NA	NA	69190076	69187260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69187300_69190100
ES.5247.7	chr11	-	3754	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-129	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.2769225900271	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTAAGAATGTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	69214730	69190313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69206103_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.8	chr11	-	3994	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	-135	2	-135	-2	multi-exon	FALSE	canonical	3	88	junction_15	16.162847964421	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTTTAAGAATGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	69214736	69190314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ES.5247.9	chr11	-	3891	18	FSM	ENSMUSG00000032782.20	ENSMUST00000123176.8	3776	18	-119	4	-119	-4	multi-exon	FALSE	canonical	1	2	junction_17	30.4995320175113	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAATGTTTAAGAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	69214720	69190316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69213515
ES.5248.1	chr11	+	655	5	NIC	ENSMUSG00000049299.15	novel	751	5	NA	NA	-26	-3	combination_of_known_junctions	FALSE	canonical	1	7	junction_4	186.090031973773	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGCCTGAGTGTGAG	NA	False	NA	13	True	AATAAA	-22	NA	69214779	69216616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216383
ES.5248.2	chr11	+	777	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	-25	-1	-25	1	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGAGTGTGAGTTCC	NA	False	NA	17	True	AATAAA	-26	NA	69214780	69216620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ES.5248.3	chr11	+	752	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	7	0	-5	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214895	69216619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
ES.5248.4	chr11	+	1572	2	ISM	ENSMUSG00000049299.15	ENSMUST00000060956.13	628	4	3	6	3	-6	intron_retention	FALSE	canonical	3	462	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTGCCTGAGTGT	NA	False	NA	10	True	AATAAA	-19	NA	69214903	69216613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69215083_69215220
ES.5249.1	chr11	+	2552	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	-18	4	-18	-4	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACCACGTCTGAAAT	NA	False	NA	7	True	AATAAA	-16	NA	69217065	69223864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.10	chr11	+	2521	14	NNC	ENSMUSG00000018470.9	novel	2538	14	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	13.0474781621022	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCACGTCTGAAATTGC	NA	False	NA	10	True	AATAAA	-19	NA	69217126	69223867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221080_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.11	chr11	+	5318	9	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	44	-46	intron_retention	FALSE	canonical	3	36	junction_1	5.19615242270663	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTCCCAGGGATCTGT	NA	False	NA	-35	True	AATAAA	-32	NA	69217127	69223822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.12	chr11	+	3603	10	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	21	-6	intron_retention	FALSE	canonical	3	34	junction_3	5.82035593498169	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGACCACGTCTGAA	NA	False	NA	5	True	AATAAA	-14	NA	69218712	69223862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.2	chr11	+	3989	11	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	7	-63	intron_retention	FALSE	canonical	3	36	junction_1	5.12249938994628	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCCCTCTGCTGTAAG	NA	False	NA	-52	True	AATAAA	-15	NA	69217090	69223805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.3	chr11	+	5299	10	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	12	-9	intron_retention	FALSE	canonical	3	36	junction_1	4.90904934097212	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTCACGACCACGTCT	NA	False	NA	2	True	AATAAA	-11	NA	69217095	69223859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69220721_69220808_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.4	chr11	+	3867	12	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	21	-1	intron_retention	FALSE	canonical	3	34	junction_5	5.58184779382136	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCACGTCTGAAATTGC	NA	False	NA	10	True	AATAAA	-19	NA	69217104	69223867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.5	chr11	+	3730	13	NNC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	28	-3	intron_retention	FALSE	canonical	1	1	junction_6	12.7440073062684	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGACCACGTCTGAAATT	NA	False	NA	8	True	AATAAA	-17	NA	69217111	69223865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221080_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.6	chr11	+	3759	13	NIC	ENSMUSG00000018470.9	novel	2538	14	NA	NA	33	-7	intron_retention	FALSE	canonical	3	22	junction_1	8.11848029019115	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCACGACCACGTCTGA	NA	False	NA	4	True	AATAAA	-13	NA	69217116	69223861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.7	chr11	+	3803	12	NIC	ENSMUSG00000018470.9	novel	2126	13	NA	NA	33	-1	intron_retention	FALSE	canonical	3	32	junction_5	6.2707506767202	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCACGTCTGAAATTGC	NA	False	NA	10	True	AATAAA	-19	NA	69217116	69223867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222407_69222561_69222651_69222891
ES.5249.8	chr11	+	2821	12	NIC	ENSMUSG00000018470.9	novel	2538	14	NA	NA	33	-9	intron_retention	FALSE	canonical	3	22	junction_1	7.85509257353744	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTCACGACCACGTCT	NA	False	NA	2	True	AATAAA	-11	NA	69217116	69223859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.5249.9	chr11	+	2733	12	NNC	ENSMUSG00000018470.9	novel	2538	14	NA	NA	37	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	14.1473941180197	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGACCACGTCTGAAATT	NA	False	NA	8	True	AATAAA	-17	NA	69217120	69223865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69221053_69221222_69221310_69221573_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ES.525.1	chr1	+	146	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	58474566	58474712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58474600_58474700
ES.5250.1	chr11	-	1404	2	NNC	ENSMUSG00000086900.2	novel	566	2	NA	NA	-149	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGCATCTCCTTAAGATA	NA	False	NA	NA	False	AATAAA	-13	NA	69223097	69220653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69221003_69222042
ES.5251.1	chr11	+	1770	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	309	2	-1	-2	multi-exon	FALSE	canonical	3	42	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGTGAAAGACTGTTAT	NA	False	NA	8	True	AATAAA	-17	NA	69231595	69233465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69231885_69231984
ES.5251.2	chr11	+	1842	1	NIC	ENSMUSG00000043419.12	novel	2081	2	NA	NA	-12	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTGTGAAAGACTGTTA	NA	False	NA	7	True	AATAAA	-16	NA	69231622	69233464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69231600_69233500
ES.5252.1	chr11	-	6223	28	NIC	ENSMUSG00000018474.19	novel	6066	39	NA	NA	1725	1	intron_retention	FALSE	canonical	1	2	junction_6	12.792208705557	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGTCATTTTTGCCT	NA	False	NA	-10	True	TATAAA	-17	NA	69250822	69234097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69235305_69235961_69236089_69236296_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652
ES.5252.11	chr11	-	7172	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4292	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_34	14.0081689325972	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264524	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252350_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.13	chr11	-	7296	40	NIC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_39	13.6765971522413	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69260239	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ES.5252.14	chr11	-	6809	38	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	698	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.9468887173478	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69254907	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236473_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798
ES.5252.15	chr11	-	7019	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-1987	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	13.9844940899087	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69257592	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69257563
ES.5252.18	chr11	-	7078	39	NNC	ENSMUSG00000018474.19	novel	6066	39	NA	NA	-4306	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.177002758858	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGCTGTCATTTTTG	NA	False	NA	-13	True	TATAAA	-14	NA	69264538	69234100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239746_69239885_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.2	chr11	-	7227	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4301	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_34	14.3782837200774	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264533	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252350_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.22	chr11	-	4873	27	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-1236	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	16.780386197783	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGCTGTCATTTTTG	NA	False	NA	-13	True	TATAAA	-14	NA	69248672	69234100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239351_69239535_69239632_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69244996_69245184_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530
ES.5252.23	chr11	-	5380	21	NIC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	305	-2	intron_retention	FALSE	canonical	3	31	junction_20	8.87411967464942	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGCTGTCATTTTTG	NA	False	NA	-13	True	TATAAA	-14	NA	69247131	69234100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69235305_69235961_69236089_69236296_69237640_69237891_69238025_69238578_69238688_69239218_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032
ES.5252.24	chr11	-	7214	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4281	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_37	14.5291653904414	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGCTGTCATTTTTG	NA	False	NA	-13	True	TATAAA	-14	NA	69264513	69234100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254568_69254798_69254970_69255517_69255631_69264330
ES.5252.27	chr11	-	7131	39	FSM	ENSMUSG00000018474.19	ENSMUST00000092971.13	6066	39	11	-1076	11	-2	multi-exon	FALSE	canonical	1	2	junction_7	14.771856898599	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGTGCTGTCATTTTTG	NA	False	NA	-13	True	TATAAA	-14	NA	69260206	69234100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ES.5252.28	chr11	-	5310	20	NIC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	929	-3	intron_retention	FALSE	canonical	3	34	junction_10	8.7009408221833	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGTCATTTTT	NA	False	NA	-14	True	TATAAA	-13	NA	69246507	69234101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69235305_69235961_69236089_69236296_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456
ES.5252.29	chr11	-	8915	38	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-996	-11	intron_retention	FALSE	canonical	0	0	junction_5	14.8207699796724	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTTTCTGCGTGCTG	NA	False	NA	-22	True	TATAAA	-5	NA	69256601	69234109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69237640_69237891_69238025_69238578_69238686_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248528_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517
ES.5252.4	chr11	-	7178	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4304	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_35	12.905207425618	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264536	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.5	chr11	-	7158	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4296	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_34	13.7448334684089	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264528	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252350_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.6	chr11	-	7195	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4301	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	14.295325967259	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264533	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239994_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.7	chr11	-	7254	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4334	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_35	13.3261815138831	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264566	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
ES.5252.8	chr11	-	7250	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	14.3925431785108	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69260236	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239351_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ES.5252.9	chr11	-	7091	39	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4304	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	15.3222088193084	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264536	69234098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254568_69254798_69254970_69255517_69255631_69264330
ES.5253.1	chr11	+	1337	1	Intergenic	novelGene_4132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAGAAACAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	69264583	69265920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69264600_69265900
ES.5254.1	chr11	+	201	1	Intergenic	novelGene_4133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGAATCAGTCACCAG	NA	False	NA	NA	False	NA	NA	NA	69284852	69285053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69284900_69285100
ES.5255.1	chr11	+	874	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	-202	-1	-42	1	multi-exon	FALSE	canonical	3	948	junction_1	166	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGTGTGTAGGTC	NA	False	NA	18	True	ATTAAA	-18	NA	69286270	69287507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69286799_69287002_69287187_69287345
ES.5255.2	chr11	+	504	3	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	30	-6	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	615.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCCTGTGTCTGTGT	NA	False	NA	11	True	ATTAAA	-11	NA	69286342	69287500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69286508_69287002_69287187_69287345
ES.5255.3	chr11	+	3351	1	Genic_Genomic	ENSMUSG00000059278.10	novel	NA	NA	NA	NA	-108	2680	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCCAGGGGTAGGGGT	NA	False	NA	NA	False	NA	NA	NA	69286835	69290186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_69286800_69290200
ES.5255.4	chr11	+	498	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	-93	-1	-93	1	multi-exon	FALSE	canonical	3	1280	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGTGTGTAGGTC	NA	False	NA	18	True	ATTAAA	-18	NA	69286850	69287507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69287187_69287345
ES.5256.1	chr11	-	4764	3	NNC	ENSMUSG00000044795.13	novel	1034	4	NA	NA	-58	1302	intron_retention	TRUE	non_canonical	0	0	junction_1	11.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTGTGGGTAATCTG	NA	False	NA	NA	False	NA	NA	NA	69286515	69281448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69284836_69285053_69285875_69285959
ES.5256.2	chr11	-	3748	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-30	-2965	-30	1278	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69286189	69281472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
ES.5256.3	chr11	-	4111	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-675	-2683	-377	996	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGGGTCTGATGTGT	NA	False	NA	0	True	NA	NA	NA	69286834	69281754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
ES.5256.4	chr11	-	3635	4	NNC	ENSMUSG00000044795.13	novel	753	4	NA	NA	-92	993	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.0213499897497	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTAGTGGGTCTGATG	NA	False	NA	-3	True	NA	NA	NA	69286251	69281757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69284695_69285343_69285673_69285797_69285875_69285959
ES.5256.5	chr11	-	3435	5	NNC	ENSMUSG00000044795.13	novel	753	4	NA	NA	-85	985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6731759484026	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGCAATAACTAGTGG	NA	False	NA	-11	True	NA	NA	NA	69286244	69281765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959_69286130_69286204
ES.5256.6	chr11	-	3696	3	NIC	ENSMUSG00000044795.13	novel	753	4	NA	NA	148	981	intron_retention	FALSE	canonical	3	23	junction_2	14.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCATCTGCAATAACTA	NA	False	NA	-15	True	NA	NA	NA	69286309	69281769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69284695_69285453_69285875_69285959
ES.5256.7	chr11	-	3851	4	NNC	ENSMUSG00000044795.13	novel	1034	4	NA	NA	110	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.4742552876052	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCATCTGCAATAACT	NA	False	NA	-16	True	NA	NA	NA	69286049	69281770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69284836_69285053_69285673_69285797_69285875_69285959
ES.5256.8	chr11	-	1655	1	NIC	ENSMUSG00000044795.13	novel	778	3	NA	NA	1753	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGAGCCAAAGCCGTT	NA	False	NA	NA	False	CATAAA	-17	NA	69284406	69282751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69282800_69284400
ES.5257.1	chr11	-	859	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	-19	742	-19	-742	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	69289079	69288086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69288708_69288841
ES.5258.1	chr11	-	5222	14	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	7173	0	-2287	0	3prime_fragment	FALSE	canonical	2	3	junction_13	6.66617355178255	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCTTGTGTTTTGATG	NA	False	NA	-3	True	AATAAA	-19	NA	69297328	69289333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084
ES.5258.2	chr11	-	2880	13	NNC	ENSMUSG00000018476.8	novel	6654	23	NA	NA	143	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.34988662044071	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCTTGTGTTTTGATG	NA	False	NA	-3	True	AATAAA	-19	NA	69294898	69289333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292811_69292901_69293108_69294403_69294510_69294615_69294743_69294831
ES.5258.3	chr11	-	5022	15	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	6892	394	-2568	-394	3prime_fragment	FALSE	canonical	1	1	junction_14	7.51630879881765	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	-42	True	NA	NA	NA	69297609	69289727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084_69297436_69297522
ES.5258.4	chr11	-	4235	15	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	6956	1117	-2504	-1117	3prime_fragment	FALSE	canonical	1	1	junction_14	7.51630879881765	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGAGACGGGGAGGGG	NA	False	NA	NA	False	AAAAAG	-7	NA	69297545	69290450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084_69297436_69297522
ES.5258.5	chr11	-	2894	2	NIC	ENSMUSG00000018476.8	novel	743	3	NA	NA	-1721	324	intron_retention	FALSE	canonical	3	14	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-17	NA	69296762	69293779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69294743_69294831
ES.5259.1	chr11	+	936	2	NNC	ENSMUSG00000086591.2	novel	859	2	NA	NA	3788	10	intron_retention	FALSE	canonical	3	26	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGATGTCTAGAACTTG	2361	False	NA	NA	False	AATAAA	-28	NA	69343161	69344512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69343301_69343715
ES.526.1	chr1	+	4001	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	8	7	intron_retention	FALSE	canonical	3	232	junction_2	24.6203168135587	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACACTGTATTTCTCTA	NA	False	NA	20	True	NA	NA	NA	58484433	58501432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58484794_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.10	chr1	+	1390	7	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-43	139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.262017844357	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58484743	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58484782_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.11	chr1	+	1563	8	NIC	ENSMUSG00000026036.18	novel	2098	6	NA	NA	49	139	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	119.668589983218	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58484835	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58484945_58486603_58486706_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.12	chr1	+	3737	6	NNC	ENSMUSG00000026036.18	novel	2098	6	NA	NA	-187	7	intron_retention	FALSE	canonical	2	2	junction_1	109.044211217286	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACACTGTATTTCTCTA	NA	False	NA	20	True	NA	NA	NA	58486602	58501432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58486699_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.13	chr1	+	1198	1	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	2641	139	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58499484	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58499500_58500700
ES.526.14	chr1	+	2879	1	Genic_Genomic	ENSMUSG00000026036.18	novel	NA	NA	NA	NA	5090	2197	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAATTTGTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	58501933	58504812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_58501900_58504800
ES.526.2	chr1	+	5251	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	23	82	intron_retention	FALSE	canonical	3	232	junction_2	24.6203168135587	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTAGCCTGGCTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	58484448	58502697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58484794_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.3	chr1	+	1684	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	153	1932	37	140	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTTTGTTTCTTGG	NA	False	NA	16	True	ATTAAA	-16	NA	58484462	58500683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.4	chr1	+	2425	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	161	1183	45	7	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACACTGTATTTCTCTA	NA	False	NA	20	True	NA	NA	NA	58484470	58501432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.5	chr1	+	1627	8	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-132	139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	120.53062952238	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58484654	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58484794_58486792_58487249_58489545_58489709_58490794_58490931_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.6	chr1	+	3016	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-118	139	intron_retention	FALSE	canonical	3	232	junction_2	24.6203168135587	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58484668	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58484794_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.7	chr1	+	2654	8	NNC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	-110	139	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	120.53062952238	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGTTTTGTTTCTTG	NA	False	NA	15	True	ATTAAA	-15	NA	58484676	58500682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58484794_58486792_58487249_58489545_58489709_58489978_58490454_58490537_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.8	chr1	+	3448	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	404	-83	-73	83	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTAGCCTGGCTTCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	58484713	58502698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ES.526.9	chr1	+	5433	6	ISM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	423	1190	-54	0	intron_retention	FALSE	canonical	3	215	junction_3	27.7229147096765	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACACACTGTAT	NA	False	NA	13	True	NA	NA	NA	58484732	58501425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938
ES.5260.1	chr11	+	280	1	Intergenic	novelGene_4137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCCAGCAGCCACAT	9113	False	NA	NA	False	NA	NA	NA	69432449	69432729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69432400_69432700
ES.5260.100	chr11	+	3013	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-33	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	443.506544893445	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523782	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534288_69534663_69534781_69539630_69539767_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.101	chr11	+	3662	13	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-31	0	intron_retention	FALSE	canonical	3	970	junction_6	78.1744399120042	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523784	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542900_69543035_69543134_69543429
ES.5260.102	chr11	+	2855	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-31	0	intron_retention	FALSE	non_canonical	0	0	junction_16	291.57235379919	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523784	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429_69543768_69544060
ES.5260.103	chr11	+	3045	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	374.927748518293	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523784	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534259_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.105	chr11	+	1492	7	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	458.851737129399	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523785	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69523954_69541861_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.106	chr11	+	3699	15	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-30	-2	intron_retention	FALSE	canonical	3	21	junction_6	294.189833548451	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTCCCATGTTG	NA	False	NA	10	True	AATAAA	-13	NA	69523785	69544121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.107	chr11	+	2791	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	310.180271810456	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523786	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.108	chr11	+	3142	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-28	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	440.891641388637	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523787	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534422_69534663_69534781_69539630_69539767_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.109	chr11	+	3455	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-28	0	intron_retention	FALSE	canonical	3	970	junction_6	99.2950894702221	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523787	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69543134_69543429
ES.5260.11	chr11	+	1746	10	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	672.180714971983	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471199	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478185_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.110	chr11	+	8626	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	970	junction_6	102.600910062056	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTCCCATGTTG	NA	False	NA	10	True	AATAAA	-13	NA	69523787	69544121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69540055_69540553_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.111	chr11	+	3232	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-27	0	intron_retention	FALSE	canonical	3	970	junction_6	96.7836074274289	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523788	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542900_69543035_69543134_69543429
ES.5260.112	chr11	+	3769	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-27	0	intron_retention	FALSE	canonical	3	970	junction_6	100.080809186112	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523788	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.113	chr11	+	704	5	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	502.191385330334	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523788	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532159_69544053
ES.5260.114	chr11	+	4442	13	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-27	0	intron_retention	FALSE	canonical	3	970	junction_6	104.192930022467	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523788	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.115	chr11	+	3573	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-27	1	intron_retention	FALSE	canonical	3	970	junction_6	100.497519766858	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69523788	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542900_69543035_69543134_69543429
ES.5260.116	chr11	+	3400	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-23	0	intron_retention	FALSE	canonical	3	970	junction_6	78.5713409666767	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523792	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.117	chr11	+	3066	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	374.610875387351	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523792	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534288_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.119	chr11	+	2722	11	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-23	211	intron_retention	FALSE	canonical	3	970	junction_6	68.80879304275	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTATGAGAGGGTGGGT	NA	False	NA	NA	False	NA	NA	NA	69523792	69542759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669
ES.5260.12	chr11	+	2485	10	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	17	0	intron_retention	FALSE	canonical	3	1895	junction_3	129.307080191513	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471201	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.120	chr11	+	3391	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	21	junction_2	449.016316344685	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523793	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531033_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534422_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.121	chr11	+	3161	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	21	junction_2	295.599699293186	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTCCCATGTTG	NA	False	NA	10	True	AATAAA	-13	NA	69523795	69544121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531033_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.123	chr11	+	2436	13	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-20	188	intron_retention	FALSE	canonical	3	970	junction_6	97.237681310625	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69523795	69542736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348
ES.5260.124	chr11	+	3857	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-20	0	intron_retention	FALSE	canonical	3	970	junction_5	98.1926014639011	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523795	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.125	chr11	+	4518	12	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-17	0	intron_retention	FALSE	canonical	3	970	junction_6	82.8671145731885	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523798	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69541376_69541669_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.126	chr11	+	1839	10	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	382.592456347902	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523799	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532333_69542222_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.127	chr11	+	3057	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-16	-28	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	439.343194901861	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523799	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531033_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534288_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.128	chr11	+	3989	12	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	970	junction_6	105.983547764237	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTCCCATGTTG	NA	False	NA	10	True	AATAAA	-13	NA	69523799	69544121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69542263_69542348_69543134_69543429
ES.5260.129	chr11	+	3904	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-16	-28	intron_retention	FALSE	canonical	3	970	junction_6	101.638470562208	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523799	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.13	chr11	+	2905	2	NNC	ENSMUSG00000059552.14	novel	3275	5	NA	NA	19	-6001	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATAATGGTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	69471203	69474646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879
ES.5260.130	chr11	+	3773	15	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-14	0	intron_retention	FALSE	canonical	3	21	junction_6	305.295507564025	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523801	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.133	chr11	+	3772	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-10	-28	intron_retention	FALSE	canonical	3	970	junction_6	100.445575360329	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523805	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.134	chr11	+	2894	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-1	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	291.570076268125	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523814	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543065_69543134_69543429
ES.5260.135	chr11	+	2851	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	282.868499899324	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTCCCATGTTGC	NA	False	NA	11	True	AATAAA	-14	NA	69523817	69544122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429_69543895_69543991
ES.5260.136	chr11	+	3350	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_3	300.584142407191	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523818	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531390_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.137	chr11	+	3172	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	11	-28	intron_retention	FALSE	canonical	3	970	junction_6	77.0304736941882	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523826	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.138	chr11	+	2933	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	291.343486873742	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTCCCATGTTGC	NA	False	NA	11	True	AATAAA	-14	NA	69523826	69544122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541370_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.139	chr11	+	4173	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	26	0	intron_retention	FALSE	canonical	3	970	junction_5	102.98210334552	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523841	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.14	chr11	+	2867	9	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	19	0	intron_retention	FALSE	canonical	3	1895	junction_3	138.380589318011	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471203	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480536_69480614_69481589_69482175
ES.5260.140	chr11	+	4664	11	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	61	-28	intron_retention	FALSE	canonical	3	970	junction_5	85.7179094472095	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523876	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532967_69534663_69534781_69539630_69540055_69540553_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.142	chr11	+	4494	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-2548	1	intron_retention	FALSE	canonical	3	970	junction_5	99.3285878654627	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69528430	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.143	chr11	+	2949	10	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	1459	0	intron_retention	FALSE	canonical	3	970	junction_1	113.804684318527	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69532437	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.144	chr11	+	4867	8	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	2693	0	intron_retention	FALSE	canonical	3	1063	junction_6	102.20068293234	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69537066	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.145	chr11	+	1269	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	-410	2	-410	-2	multi-exon	FALSE	canonical	3	116	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTGTCCCATTTGT	NA	False	NA	22	True	ATTAAA	-15	NA	69545729	69547551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69546726_69547278
ES.5260.146	chr11	+	2642	4	Fusion	ENSMUSG00000088752.3_ENSMUSG00000041287.6	novel	861	2	NA	NA	-297	732	multi-exon	FALSE	non_canonical	0	0	junction_1	0.471404520791032	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATATTTTAGTTGTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	69545842	69554683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69546726_69548541_69548651_69549616_69549746_69553162
ES.5260.147	chr11	+	7035	4	Fusion	ENSMUSG00000088752.3_ENSMUSG00000041287.6	novel	861	2	NA	NA	-277	3882	intron_retention	FALSE	non_canonical	0	0	junction_2	54.4487526640112	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAAATGGCTACCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	69545862	69557833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69546726_69547278_69548651_69549616_69549746_69553162
ES.5260.148	chr11	+	2098	3	NIC	ENSMUSG00000085890.8	novel	578	5	NA	NA	-49	-2	intron_retention	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTTCCTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	69572914	69581965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69574353_69575229_69575500_69581575
ES.5260.149	chr11	+	3326	3	NIC	ENSMUSG00000085890.8	novel	578	5	NA	NA	-24	-3169	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATACATGACCAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	69572939	69578421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69572974_69574252_69574353_69575229
ES.5260.150	chr11	+	175	1	Intergenic	novelGene_4149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTTT	1345	False	NA	NA	False	NA	NA	NA	69587381	69587556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69587400_69587600
ES.5260.151	chr11	+	162	1	Intergenic	novelGene_4150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	330	False	NA	NA	False	NA	NA	NA	69590003	69590165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69590000_69590200
ES.5260.17	chr11	+	1732	10	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	672.180714971983	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471209	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478189_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.18	chr11	+	2132	8	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_2	754.655591130477	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471220	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478179_69478459_69479189_69479374_69479451_69479565_69479966_69480689_69481481_69481589_69482175
ES.5260.19	chr11	+	2962	9	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	351	junction_8	580.657816618359	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69471221	69482697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.2	chr11	+	215	2	Antisense	novelGene_ENSMUSG00000119662.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2480	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATAGTTT	9114	False	NA	NA	False	NA	NA	NA	69432450	69587556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69432637_69587527
ES.5260.20	chr11	+	4059	6	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1895	junction_3	141.167418337235	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471222	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69480536_69480614_69481589_69482175
ES.5260.21	chr11	+	3436	8	NIC	ENSMUSG00000059552.14	novel	1822	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	1895	junction_3	142.676314124822	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471222	69482699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480536_69480614
ES.5260.24	chr11	+	1806	10	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1895	junction_3	137.00455070391	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471228	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480689_69481481_69481589_69482175
ES.5260.25	chr11	+	2860	9	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1895	junction_3	136.159775172405	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471228	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.27	chr11	+	3402	1	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	1	-6017	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACTAAATCAAAC	NA	False	NA	NA	False	NA	NA	NA	69471228	69474630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471200_69474600
ES.5260.29	chr11	+	3200	8	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1941	junction_4	125.282212037708	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471228	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614
ES.5260.3	chr11	+	176	2	Intergenic	novelGene_4138	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAGAAAAG	9154	False	NA	NA	False	NA	NA	NA	69432490	69484852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69432650_69484835
ES.5260.30	chr11	+	3832	7	NIC	ENSMUSG00000059552.14	novel	1822	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	1895	junction_3	153.358421860541	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471228	69482699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69480536_69480614
ES.5260.31	chr11	+	2047	10	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	141.615110444376	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.32	chr11	+	2446	9	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	699.290667390893	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTATATGGTTTTGAGA	NA	False	NA	9	True	AATAAA	-10	NA	69471230	69482692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478179_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.33	chr11	+	1404	2	NNC	ENSMUSG00000059552.14	novel	1822	11	NA	NA	0	-7475	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGAGCCAGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	69471230	69473172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879
ES.5260.34	chr11	+	3808	6	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	140.697405804087	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69480077_69480398_69481589_69482175
ES.5260.35	chr11	+	2233	12	NNC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	860.977754773534	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879_69472292_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.36	chr11	+	3103	9	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	3	0	-2	intron_retention	FALSE	canonical	3	1895	junction_3	134.129543259492	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69471230	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614
ES.5260.37	chr11	+	1793	12	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	788.835652053337	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69471230	69482697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879_69471949_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.38	chr11	+	2545	10	NNC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	660.988952299302	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482086
ES.5260.39	chr11	+	2552	10	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	351	junction_9	553.036220991352	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.4	chr11	+	372	2	Antisense	novelGene_ENSMUSG00000119662.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2490	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCCA	9154	False	NA	NA	False	NA	NA	NA	69432490	69590180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69432705_69590022
ES.5260.41	chr11	+	2535	9	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	133.111266897284	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480689_69481481_69481589_69482175
ES.5260.42	chr11	+	2874	9	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	351	junction_8	580.331101613553	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471230	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.43	chr11	+	1726	10	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	672.180714971983	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69471230	69482697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478173_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.44	chr11	+	1715	11	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	634.8450519615	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATATGGTTTTGAGAGG	NA	False	NA	11	True	AATAAA	-12	NA	69471230	69482694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480404_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.45	chr11	+	2440	9	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	699.290667390893	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69471230	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69477716_69477800_69478189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.46	chr11	+	3649	8	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	1895	junction_3	126.921637402046	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69471230	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69480077_69480398_69480536_69480614_69481589_69482175
ES.5260.47	chr11	+	1707	11	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	624.183538712773	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471234	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471328_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.49	chr11	+	2131	12	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	779.63500678308	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471236	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879_69472292_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.5	chr11	+	1859	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	-86	-1	-86	1	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTGAGAGGTTGATA	NA	False	NA	17	True	AATAAA	-18	NA	69471098	69482700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.52	chr11	+	3082	8	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	12	0	intron_retention	FALSE	canonical	3	351	junction_7	620.967612287633	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471242	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69480077_69480398_69480536_69480614_69481589_69482079
ES.5260.54	chr11	+	3196	6	NNC	ENSMUSG00000059552.14	novel	403	3	NA	NA	1336	0	intron_retention	FALSE	non_canonical	0	0	junction_1	827.938500131501	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69472566	69482699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69473928_69479004_69479374_69479451_69479565_69479966_69480689_69481481_69481589_69482175
ES.5260.55	chr11	+	5453	10	NNC	ENSMUSG00000059552.14	novel	403	3	NA	NA	2198	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	642.998012784211	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69473428	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69474677_69475854_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.56	chr11	+	3677	11	NNC	ENSMUSG00000059552.14	novel	403	3	NA	NA	3243	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	624.183538712773	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69474473	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69474677_69475854_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.57	chr11	+	4055	10	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	4141	1	4141	0	3prime_fragment	FALSE	canonical	3	351	junction_9	548.488923101855	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69475371	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.58	chr11	+	4485	9	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-3945	-1	intron_retention	FALSE	canonical	3	1895	junction_2	102.538712201783	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGGTTTTGAGAGGTTG	NA	False	NA	14	True	AATAAA	-15	NA	69475575	69482697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.59	chr11	+	4262	7	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-2997	0	intron_retention	FALSE	canonical	3	1895	junction_2	106.600500311521	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69476523	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69477800_69478082_69478105_69478197_69479374_69479451_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.6	chr11	+	1880	11	FSM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	-11	-2	-11	1	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTGAGAGGTTGATA	NA	False	NA	17	True	AATAAA	-18	NA	69471173	69482700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ES.5260.60	chr11	+	3324	9	NIC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-2721	0	intron_retention	FALSE	canonical	3	1895	junction_2	106.270806786248	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69476799	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69481589_69482175
ES.5260.61	chr11	+	1776	11	NNC	ENSMUSG00000059552.14	novel	403	3	NA	NA	-2716	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	623.593304967268	1042	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69476804	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69476967_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.62	chr11	+	6600	3	NNC	ENSMUSG00000059552.14	novel	3275	5	NA	NA	-1545	2717	intron_retention	FALSE	non_canonical	0	0	junction_2	947.5	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTGGATCTCCAAATT	NA	False	NA	NA	False	NA	NA	NA	69477975	69485416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69478105_69478197_69484582_69485329
ES.5260.63	chr11	+	3841	1	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	-663	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1042	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69478857	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69478900_69482700
ES.5260.64	chr11	+	1851	3	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	512	-2	intron_retention	FALSE	canonical	3	351	junction_2	876	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69480032	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69480077_69480398_69481589_69482079
ES.5260.65	chr11	+	162	1	Intergenic	novelGene_4139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACAAATAATTCTT	NA	False	NA	NA	False	NA	NA	NA	69486923	69487085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69486900_69487100
ES.5260.66	chr11	+	171	1	Intergenic	novelGene_4140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAACAAACTAGG	NA	False	NA	NA	False	NA	NA	NA	69487373	69487544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69487400_69487500
ES.5260.67	chr11	+	1383	5	NNC	ENSMUSG00000069835.11	novel	968	6	NA	NA	8	128	intron_retention	FALSE	canonical	0	0	junction_3	4.41588043316392	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69512857	69514824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69513159_69513318_69513371_69513532_69513617_69513728_69513788_69513937
ES.5260.68	chr11	+	1877	5	NNC	ENSMUSG00000069835.11	novel	800	7	NA	NA	0	864	intron_retention	FALSE	canonical	2	2	junction_2	3.63145976158349	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCCGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	69512877	69515560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69513159_69513318_69513375_69513532_69513788_69513937_69513979_69514316
ES.5260.69	chr11	+	1784	6	FSM	ENSMUSG00000069835.11	ENSMUST00000108656.9	968	6	47	-863	19	863	multi-exon	FALSE	canonical	2	7	junction_2	1.72046505340853	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCCGCCTGCC	NA	False	NA	NA	False	NA	NA	NA	69512896	69515559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
ES.5260.70	chr11	+	2158	1	Genic_Genomic	ENSMUSG00000069835.11	novel	NA	NA	NA	NA	525	864	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCCGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	69513402	69515560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_69513400_69515600
ES.5260.71	chr11	+	178	1	Intergenic	novelGene_4142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGACAA	NA	False	NA	NA	False	NA	NA	NA	69516859	69517037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69516900_69517000
ES.5260.72	chr11	+	3664	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-245	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	285.601339282574	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523570	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.73	chr11	+	3204	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	-244	-9	-244	9	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTTGCCTTTGTCCCC	NA	False	NA	21	True	AATAAA	-24	NA	69523571	69544132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.74	chr11	+	2901	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-243	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	282.868499899324	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523572	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429_69543768_69544060
ES.5260.75	chr11	+	3116	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	291.570076268125	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523644	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542894_69543035_69543134_69543429
ES.5260.76	chr11	+	3253	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-127	1	intron_retention	FALSE	canonical	3	970	junction_6	96.750308641483	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69523688	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.78	chr11	+	3006	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-96	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	282.868499899324	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69523719	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542181_69542222_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.8	chr11	+	2291	9	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_8	700.518914805303	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTTTTGAGAGGTT	NA	False	NA	13	True	AATAAA	-14	NA	69471175	69482696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69481481
ES.5260.80	chr11	+	3648	14	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-62	-1	intron_retention	FALSE	canonical	3	970	junction_6	95.7070851810155	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTCCCATGTTGC	NA	False	NA	11	True	AATAAA	-14	NA	69523753	69544122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035
ES.5260.81	chr11	+	3035	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	286.218987130047	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69523758	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531033_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.82	chr11	+	3101	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-42	-28	intron_retention	FALSE	canonical	3	970	junction_6	96.750308641483	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523773	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69543134_69543429
ES.5260.84	chr11	+	2971	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	290.214360430355	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523774	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532159_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.85	chr11	+	3625	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-40	0	intron_retention	FALSE	canonical	3	21	junction_6	294.966318227843	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523775	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.86	chr11	+	3168	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-40	11	intron_retention	FALSE	canonical	3	970	junction_6	97.2474506949497	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCTTTGTCCCCAG	NA	False	NA	23	True	AATAAA	-26	NA	69523775	69544134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.87	chr11	+	2961	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	291.57235379919	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523776	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541910_69542076_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.88	chr11	+	3761	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	-28	intron_retention	FALSE	canonical	3	970	junction_6	99.5830337569854	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523776	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.89	chr11	+	3049	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	-28	intron_retention	FALSE	canonical	3	970	junction_5	94.2343650456433	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523776	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.9	chr11	+	1879	12	NNC	ENSMUSG00000059552.14	novel	1771	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	787.485526562523	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471178	69482698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69471342_69471879_69471982_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ES.5260.90	chr11	+	3629	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	0	intron_retention	FALSE	canonical	3	19	junction_13	392.751128437448	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523776	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542806_69542900_69543035_69543134_69543429
ES.5260.91	chr11	+	3185	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	-28	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	434.851770473269	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAATAAAAAAATC	NA	False	NA	-16	True	NA	NA	NA	69523776	69544095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534422_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542806_69542900_69543035_69543134_69543429
ES.5260.92	chr11	+	3330	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	0	intron_retention	FALSE	canonical	3	970	junction_6	98.3810013598735	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523776	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.93	chr11	+	2973	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	291.570076268125	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523776	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539992_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.94	chr11	+	3934	14	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	0	intron_retention	FALSE	canonical	3	21	junction_6	316.791813742776	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523776	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69543134_69543429
ES.5260.95	chr11	+	3150	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-39	1	intron_retention	FALSE	canonical	0	0	junction_8	301.130728348263	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTCCCATGTTGCCT	NA	False	NA	13	True	AATAAA	-16	NA	69523776	69544124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539982_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.96	chr11	+	2838	18	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	282.868499899324	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523779	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69523817_69523965_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.97	chr11	+	3569	15	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_7	310.075904137246	1196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523780	69544123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532967_69534663_69534781_69539630_69539762_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ES.5260.99	chr11	+	2995	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	286.983013434593	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTTTCCCATGTTGC	NA	False	NA	11	True	AATAAA	-14	NA	69523782	69544122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543417
ES.5261.1	chr11	+	247	1	Intergenic	novelGene_4151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2950	False	NA	NA	False	NA	NA	NA	69594449	69594696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69594400_69594700
ES.5261.10	chr11	+	4005	4	FSM	ENSMUSG00000018750.15	ENSMUST00000108639.8	7811	4	-3	3809	-3	5	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGGCTTCTTTGGGGC	217	False	NA	NA	False	AATAGA	-21	NA	69656744	69671040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69656912_69666201_69666269_69666687_69667716_69668297
ES.5261.11	chr11	+	1361	1	ISM	ENSMUSG00000018750.15	ENSMUST00000108639.8	7811	4	14666	2075	5182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGCTCACAGCGGGAT	30	False	NA	6	True	AATAAA	-16	NA	69671413	69672774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69671400_69672800
ES.5261.12	chr11	+	3188	1	Antisense	novelGene_ENSMUSG00000089876.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATAAAGTAAAAT	1841	False	NA	NA	False	NA	NA	NA	69694496	69697684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69694500_69697700
ES.5261.13	chr11	+	489	1	Antisense	novelGene_ENSMUSG00000089876.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGCTA	3148	False	NA	NA	False	NA	NA	NA	69695803	69696292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69695800_69696300
ES.5261.14	chr11	+	179	1	Intergenic	novelGene_4161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	69706997	69707176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69707000_69707200
ES.5261.15	chr11	+	157	1	Intergenic	novelGene_4162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATCAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	69710169	69710326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69710200_69710300
ES.5261.16	chr11	+	391	4	NNC	ENSMUSG00000070394.11	novel	603	3	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	714.705689233143	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTTTGGTGTCTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	69729223	69730438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69729255_69729745_69729778_69730013_69730095_69730191
ES.5261.17	chr11	+	518	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	-30	4	-20	1	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGGTGTCTTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	69729319	69730440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ES.5261.19	chr11	+	423	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	-1	-1	-1	1	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGGTGTCTTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	69729338	69730440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
ES.5261.2	chr11	+	253	2	Antisense	novelGene_ENSMUSG00000104996.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACCAGCTGAGT	2954	False	NA	NA	False	NA	NA	NA	69594453	69791101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69594655_69791049
ES.5261.20	chr11	+	816	2	ISM	ENSMUSG00000070394.11	ENSMUST00000128281.2	603	3	-104	-12	10	12	intron_retention	FALSE	canonical	3	1507	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAATTAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69729359	69730411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69729778_69730013
ES.5261.21	chr11	+	761	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	26	-366	-15	361	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACACATGGGAATGTA	NA	False	NA	NA	False	NA	NA	NA	69729365	69730805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
ES.5261.22	chr11	+	1073	1	NIC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-13	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTTGGTGTCTTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	69729367	69730440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69729400_69730400
ES.5261.23	chr11	+	389	4	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	-12	12	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	694.908307300723	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAATTAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69729368	69730411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69729425_69729745_69729778_69730013_69730095_69730191
ES.5261.24	chr11	+	1426	1	Genic_Genomic	ENSMUSG00000070394.11	novel	NA	NA	NA	NA	-1	361	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACACATGGGAATGTA	NA	False	NA	NA	False	NA	NA	NA	69729379	69730805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_69729400_69730800
ES.5261.25	chr11	+	698	3	FSM	ENSMUSG00000070394.11	ENSMUST00000128281.2	603	3	-83	-12	0	12	multi-exon	FALSE	canonical	3	1507	junction_1	11	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAATTAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	69729380	69730411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69729778_69730013_69730095_69730191
ES.5261.26	chr11	+	135	1	Intergenic	novelGene_4163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	69731526	69731661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69731500_69731700
ES.5261.27	chr11	+	2271	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-344	0	-44	0	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	False	NA	22	True	TATAAA	-22	NA	69737157	69741869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.28	chr11	+	1899	7	NIC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	60	junction_1	4.99165971062398	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	False	NA	15	True	TATAAA	-15	NA	69737409	69741862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.29	chr11	+	1688	8	NNC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	-21	-10	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	22.8963948681705	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTTTTAAACAGTAGA	NA	False	NA	5	True	TATAAA	-5	NA	69737421	69741852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69737518_69737819_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.3	chr11	+	897	1	Intergenic	novelGene_4152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	4200	False	NA	NA	False	NA	NA	NA	69595699	69596596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69595700_69596600
ES.5261.30	chr11	+	1780	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	-10	1015	-10	0	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	False	NA	22	True	TATAAA	-22	NA	69737432	69741869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.31	chr11	+	4241	7	NNC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	2	-92	intron_retention	FALSE	canonical	3	5	junction_1	24.4500624857188	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCACCTCTACAACCTT	NA	False	NA	NA	False	CATAAA	-14	NA	69737444	69742792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69737518_69737819_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69741000_69741169
ES.5261.32	chr11	+	1876	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	6	903	6	112	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTAGTTTTCATCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	69737448	69741981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.33	chr11	+	1394	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	7	1384	7	-362	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCCTTCCTCTGGGG	NA	False	NA	NA	False	TTTAAA	-16	NA	69737449	69741500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.34	chr11	+	2226	6	NIC	ENSMUSG00000019461.13	novel	1927	7	NA	NA	7	-5	intron_retention	FALSE	canonical	3	67	junction_3	3.54400902933387	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAACAGTAGAAGCCG	NA	False	NA	10	True	TATAAA	-10	NA	69737449	69741857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.35	chr11	+	1540	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-52	439	7	-432	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTTCTGTTCACCATC	NA	False	NA	NA	False	NA	NA	NA	69737449	69741430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.36	chr11	+	2906	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	-52	-927	7	-88	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTACAACCTTCCTC	NA	False	NA	NA	False	CATAAA	-18	NA	69737449	69742796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.37	chr11	+	2686	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	13	86	13	-86	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACAACCTTCCTCTG	NA	False	NA	NA	False	CATAAA	-20	NA	69737455	69742798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.38	chr11	+	1765	8	NNC	ENSMUSG00000019461.13	novel	2785	8	NA	NA	-28	112	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	22.8963948681705	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTAGTTTTCATCAC	NA	False	NA	NA	False	ATTAAA	-21	NA	69737473	69741981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69737518_69737819_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ES.5261.4	chr11	+	151	1	Intergenic	novelGene_4153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAATTCTAAAAAAGAA	6912	False	NA	NA	False	NA	NA	NA	69608155	69608306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69608200_69608300
ES.5261.5	chr11	+	211	1	Intergenic	novelGene_4157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTTGTTTAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	69614379	69614590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69614400_69614600
ES.5261.6	chr11	+	3637	1	Antisense	novelGene_ENSMUSG00000005198.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCATGCCTGAAACCTA	8091	False	NA	NA	False	ATTAAA	-22	NA	69630163	69633800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_69630200_69633800
ES.5261.7	chr11	+	179	1	Intergenic	novelGene_4158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTACACTA	7775	False	NA	NA	False	NA	NA	NA	69641522	69641701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69641500_69641700
ES.5261.8	chr11	+	157	1	Intergenic	novelGene_4159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATATTAAA	2023	False	NA	NA	False	NA	NA	NA	69644810	69644967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69644800_69645000
ES.5261.9	chr11	+	7719	4	NNC	ENSMUSG00000018750.15	novel	2552	3	NA	NA	-4848	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAATCATTTTCTACAT	6716	False	NA	NA	False	AATAAA	-28	NA	69651889	69674858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69651953_69666201_69666269_69666687_69667716_69668297
ES.5262.1	chr11	+	5099	28	NIC	ENSMUSG00000047284.15	novel	3938	28	NA	NA	-25	0	intron_retention	TRUE	canonical	1	1	junction_1	20.7828936726855	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69791872	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69791975_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.10	chr11	+	5089	28	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_27	19.8662192343351	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTGCCTCCGCCTCT	NA	False	NA	12	True	AATAAA	-12	NA	69792646	69804643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69803952
ES.5262.11	chr11	+	5297	28	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-29	-3	intron_retention	FALSE	canonical	3	43	junction_8	16.2390408333722	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTGCCTCCGCCTCT	NA	False	NA	12	True	AATAAA	-12	NA	69792687	69804643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.12	chr11	+	6233	28	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-21	-4	intron_retention	FALSE	canonical	1	2	junction_11	20.2527242490035	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATCTGCCTCCGCCTC	NA	False	NA	11	True	AATAAA	-11	NA	69792695	69804642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797711_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754
ES.5262.13	chr11	+	5319	30	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	22.5811260407872	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCCGCCTCTGTCTC	NA	False	NA	17	True	AATAAA	-17	NA	69792695	69804648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803640_69803749_69803952
ES.5262.14	chr11	+	5371	29	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	20.628238768588	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69792698	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801413_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.16	chr11	+	6247	28	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	2	-2	intron_retention	FALSE	canonical	1	2	junction_22	20.1446075320426	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69792854	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801413_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754
ES.5262.17	chr11	+	5222	29	NNC	ENSMUSG00000047284.15	novel	4952	29	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	24.628256544225	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCATCTGCCTCCGCCT	NA	False	NA	10	True	AATAAA	-10	NA	69792854	69804641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797535_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801413_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.18	chr11	+	4987	29	NNC	ENSMUSG00000047284.15	novel	3938	28	NA	NA	495	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7697226161309	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69793476	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793573_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.19	chr11	+	7029	20	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-338	0	intron_retention	FALSE	canonical	3	43	junction_11	15.8481366381997	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69793879	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798839_69798921_69799054_69799284_69799729_69799819_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69802152_69802269_69802415_69802567
ES.5262.2	chr11	+	5091	29	NNC	ENSMUSG00000047284.15	novel	3938	28	NA	NA	60	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7697226161309	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCCGCCTCTGTCTC	NA	False	NA	17	True	AATAAA	-17	NA	69791957	69804648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69792154_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.20	chr11	+	6351	24	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-256	-1	intron_retention	FALSE	canonical	0	0	junction_1	21.4105604386872	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGCCTCCGCCTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	69793961	69804645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69794279_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799729_69799819_69799919_69800042_69800205_69800373_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754
ES.5262.21	chr11	+	4695	28	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-219	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.131197947527	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCATCTGCCTCCGCC	NA	False	NA	9	True	AATAAA	-9	NA	69793998	69804640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69794279_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803340_69803380_69803952
ES.5262.22	chr11	+	4624	27	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	9	0	intron_retention	FALSE	canonical	3	43	junction_7	16.818206533573	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69794226	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.24	chr11	+	4318	27	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	260	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	24.0335379573121	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	69794477	69804647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798923_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802885_69802921_69803952
ES.5262.26	chr11	+	3883	21	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-1489	0	intron_retention	FALSE	canonical	0	0	junction_1	22.5818511198706	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69796600	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69797122_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.27	chr11	+	3542	21	ISM	ENSMUSG00000047284.15	ENSMUST00000177138.8	4886	28	4404	-303	-1044	-2	3prime_fragment	FALSE	canonical	3	25	junction_7	18.2660887986454	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69797045	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.28	chr11	+	4515	20	NNC	ENSMUSG00000047284.15	novel	4886	28	NA	NA	-974	-4	intron_retention	FALSE	canonical	0	0	junction_18	25.5725571398396	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATCTGCCTCCGCCTC	NA	False	NA	11	True	AATAAA	-11	NA	69797115	69804642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69797234_69797343_69797430_69797551_69797711_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802432_69802567_69802681_69802754
ES.5262.29	chr11	+	3823	19	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-705	1	intron_retention	FALSE	canonical	1	2	junction_12	23.2471955032308	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	69797384	69804647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801413_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.3	chr11	+	5386	29	FSM	ENSMUSG00000047284.15	ENSMUST00000177476.8	4952	29	-125	-309	-125	4	multi-exon	FALSE	canonical	3	25	junction_15	17.9310968625424	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCGCCTCTGTCTCCC	NA	False	NA	19	True	AATAAA	-19	NA	69792516	69804650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.31	chr11	+	3577	18	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-511	-2	intron_retention	FALSE	canonical	1	2	junction_1	23.7599005042597	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69797578	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69797711_69797809_69798009_69798089_69798167_69798249_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.32	chr11	+	3391	17	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-205	0	intron_retention	FALSE	non_canonical	0	0	junction_6	27.9736902061562	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69797884	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69798009_69798089_69798167_69798249_69798839_69798921_69799054_69799284_69799431_69799503_69799731_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802432_69802567_69802681_69802754_69802921_69803952
ES.5262.33	chr11	+	2908	15	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	162	0	intron_retention	FALSE	canonical	3	43	junction_2	16.825788030792	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69798251	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69798329_69798662_69798839_69798921_69799054_69799284_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.34	chr11	+	3498	10	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	-27	1	intron_retention	FALSE	canonical	0	0	junction_9	25.8088892715688	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	69799433	69804647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802432_69802567
ES.5262.35	chr11	+	3241	11	NNC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	129	-2	intron_retention	FALSE	canonical	1	4	junction_7	27.1044276825761	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69799589	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801933_69802043_69802152_69802269_69802415_69802567_69802681_69802754
ES.5262.36	chr11	+	3563	5	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	146	-2	intron_retention	FALSE	canonical	3	73	junction_1	16.2864974749023	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69799947	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69800539_69801086_69801246_69801560_69802152_69802269_69802415_69802567
ES.5262.37	chr11	+	3187	7	NIC	ENSMUSG00000047284.15	novel	5188	29	NA	NA	286	-2	intron_retention	FALSE	canonical	3	73	junction_2	14.0317101198995	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69800087	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69802415_69802567_69802681_69802754
ES.5262.38	chr11	+	1388	2	NNC	ENSMUSG00000047284.15	novel	675	7	NA	NA	1193	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	2270	False	NA	15	True	AATAAA	-15	NA	69803054	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69803749_69803952
ES.5262.5	chr11	+	5538	28	NNC	ENSMUSG00000047284.15	novel	4952	29	NA	NA	-83	1	intron_retention	FALSE	canonical	1	2	junction_10	21.778218690422	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCCGCCTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	69792558	69804647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69793012_69793833_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797711_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.6	chr11	+	5370	28	NIC	ENSMUSG00000047284.15	novel	4952	29	NA	NA	-41	-2	intron_retention	FALSE	canonical	3	25	junction_15	17.8173941306713	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTGCCTCCGCCTCTG	NA	False	NA	13	True	AATAAA	-13	NA	69792600	69804644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802921_69803952
ES.5262.8	chr11	+	5264	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	-74	-2	1	2	multi-exon	FALSE	canonical	3	43	junction_8	16.6703864896494	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCCGCCTCTGTCTC	NA	False	NA	17	True	AATAAA	-17	NA	69792642	69804648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5262.9	chr11	+	5195	28	FSM	ENSMUSG00000047284.15	ENSMUST00000108617.10	4892	28	2	-305	2	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7787350409975	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69792643	69804646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69793012_69793833_69794279_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ES.5263.1	chr11	+	1557	8	NIC	ENSMUSG00000023170.15	novel	1220	10	NA	NA	-36	-3	intron_retention	FALSE	canonical	3	266	junction_7	33.1182174419248	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCATGCCTGAGTGCTG	4055	False	NA	8	True	AATAAA	-18	NA	69804839	69807413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69807120_69807245
ES.5263.11	chr11	+	1610	7	ISM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	33	7	33	7	intron_retention	FALSE	canonical	3	268	junction_2	28.0203299211285	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCATCATGCCTGAGT	4124	False	NA	4	True	AATAAA	-14	NA	69804908	69807409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690
ES.5263.2	chr11	+	1196	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-34	-3	-34	2	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAGTGCTGTTTATT	4057	False	NA	14	True	AATAAA	-24	NA	69804841	69807419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ES.5263.3	chr11	+	1393	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	-174	1	-32	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCTGAGTGCTGTTT	4059	False	NA	11	True	AATAAA	-21	NA	69804843	69807416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ES.5263.4	chr11	+	1158	11	NNC	ENSMUSG00000023170.15	novel	1311	11	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.254832315265	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCATGCCTGAGTGCT	4072	False	NA	7	True	AATAAA	-17	NA	69804856	69807412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69804896_69805098_69805260_69805577_69805688_69805773_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ES.5263.5	chr11	+	1551	7	NNC	ENSMUSG00000023170.15	novel	1159	11	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	125.579545397418	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCTGAGTGCTGTTT	4073	False	NA	11	True	AATAAA	-21	NA	69804857	69807416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69804896_69805098_69805260_69805577_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858
ES.5263.6	chr11	+	1572	8	NNC	ENSMUSG00000023170.15	novel	1311	11	NA	NA	-13	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	118.618235167641	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCATGCCTGAGTGCTG	4078	False	NA	8	True	AATAAA	-18	NA	69804862	69807413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69804896_69805098_69805260_69805577_69806045_69806133_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ES.5263.7	chr11	+	1129	11	NNC	ENSMUSG00000023170.15	novel	1159	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	110.298685395611	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGCCTGAGTGCTGTT	4085	False	NA	10	True	AATAAA	-20	NA	69804869	69807415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806893_69806939_69807023_69807120_69807245
ES.5263.9	chr11	+	1448	8	ISM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	-1	1	-1	-1	intron_retention	FALSE	canonical	3	122	junction_1	75.5691331004334	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGCCTGAGTGCTGTT	4090	False	NA	10	True	AATAAA	-20	NA	69804874	69807415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690
ES.5264.1	chr11	+	162	1	Intergenic	novelGene_4168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	69817059	69817221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69817100_69817200
ES.5265.1	chr11	+	173	1	Intergenic	novelGene_4169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAAGGATTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	69821433	69821606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69821400_69821600
ES.5266.1	chr11	+	177	1	Intergenic	novelGene_4170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTTTTAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	69821622	69821799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_69821600_69821800
ES.5267.1	chr11	+	5271	5	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-158	3	intron_retention	FALSE	canonical	3	80	junction_3	5.06828373317832	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTCTGGCTCTTCTGTT	NA	False	NA	24	True	AGTAAA	-27	NA	69826463	69832434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.10	chr11	+	1549	9	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	31.3478468160096	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGCAGGCTTTC	NA	False	NA	-5	True	NA	NA	NA	69826737	69832405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831853_69831957_69832051
ES.5267.11	chr11	+	2144	8	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-150	0	intron_retention	FALSE	canonical	3	31	junction_1	25.0428204710024	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	11	True	AGTAAA	-14	NA	69827002	69832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69827075_69827722_69827787_69829167_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.12	chr11	+	3370	8	NNC	ENSMUSG00000018554.14	novel	1351	9	NA	NA	-24	4	intron_retention	FALSE	canonical	1	1	junction_2	37.8865115192999	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGGTCTCTGGCTC	NA	False	NA	17	True	AGTAAA	-20	NA	69827128	69832427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69829202_69830063_69830154_69830339_69830519_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.13	chr11	+	4333	5	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	254	0	intron_retention	FALSE	canonical	1	1	junction_3	37.9835490706174	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	11	True	AGTAAA	-14	NA	69827406	69832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831853_69831957_69832051
ES.5267.14	chr11	+	3625	2	NIC	ENSMUSG00000018554.14	novel	489	3	NA	NA	1486	0	intron_retention	FALSE	canonical	3	93	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	11	True	AGTAAA	-14	NA	69828638	69832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69831258_69831415
ES.5267.15	chr11	+	3693	6	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-1184	2104	intron_retention	FALSE	canonical	0	0	junction_5	34.796551553279	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCATTTAGCTTTTT	NA	False	NA	NA	False	AATGAA	-12	NA	69829488	69834535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051_69833666_69834319
ES.5267.16	chr11	+	1779	3	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-299	3	intron_retention	FALSE	canonical	3	89	junction_2	2	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGCAGGCTTTC	NA	False	NA	-5	True	NA	NA	NA	69830373	69832405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69831258_69831415_69831957_69832051
ES.5267.2	chr11	+	4702	6	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-139	-1	intron_retention	FALSE	canonical	3	43	junction_1	17.8840711248865	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	20	True	AGTAAA	-23	NA	69826482	69832430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.3	chr11	+	4456	5	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-139	0	intron_retention	FALSE	canonical	0	0	junction_4	36.7312877530859	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	11	True	AGTAAA	-14	NA	69826482	69832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69832203
ES.5267.4	chr11	+	3293	7	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-111	-1	intron_retention	FALSE	canonical	3	36	junction_1	22.5141930543577	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	20	True	AGTAAA	-23	NA	69826510	69832430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69827787_69829167_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.5	chr11	+	4826	7	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-92	1	intron_retention	FALSE	canonical	1	1	junction_1	39.4788973165834	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGTCCTGGTCTCT	NA	False	NA	12	True	AGTAAA	-15	NA	69826529	69832422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69830154_69830339_69830519_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.6	chr11	+	2314	8	NNC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	33.6439945212654	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCCTGGTCTC	NA	False	NA	11	True	AGTAAA	-14	NA	69826619	69832421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69827787_69829167_69829202_69830063_69830155_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.8	chr11	+	3060	7	NIC	ENSMUSG00000018554.14	novel	1673	9	NA	NA	20	-1	intron_retention	FALSE	canonical	3	31	junction_1	25.2498624858742	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	20	True	AGTAAA	-23	NA	69826641	69832430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69827075_69827722_69827787_69829167_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5267.9	chr11	+	1628	9	FSM	ENSMUSG00000018554.14	ENSMUST00000018698.12	1673	9	44	1	44	-1	multi-exon	FALSE	canonical	3	30	junction_3	26.1291862674673	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGGTCTCTGGCTCTTC	NA	False	NA	20	True	AGTAAA	-23	NA	69826665	69832430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ES.5268.1	chr11	+	1345	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	-11	1	-11	-1	multi-exon	TRUE	canonical	3	113	junction_1	5.71547606649408	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTCCAGGCCGCTTT	8732	False	NA	8	True	AATAAA	-18	NA	69856210	69858710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
ES.5268.2	chr11	+	3596	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	309	-2570	309	2570	multi-exon	FALSE	canonical	3	113	junction_1	5.71547606649408	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGCTTTTGGTCGTGG	9052	False	NA	NA	False	NA	NA	NA	69856530	69861281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
ES.5269.1	chr11	+	1821	8	FSM	ENSMUSG00002075075.1_ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	-382	188	82	11	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCACTCCTGCTCCA	NA	False	NA	NA	False	TTTAAA	-23	NA	69871599	69881239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ES.5269.10	chr11	+	2250	8	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018572.11	novel	2214	4	NA	NA	-77	0	multi-exon	FALSE	canonical	3	4	junction_4	308.488944001934	413	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	5147	False	NA	16	True	AATAAA	-26	NA	69882387	69890835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284_69885367_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.11	chr11	+	2008	8	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018572.11	novel	1351	4	NA	NA	-37	0	multi-exon	FALSE	canonical	3	4	junction_4	357.132399846903	413	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	5187	False	NA	15	True	AATAAA	-25	NA	69882427	69890834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284_69885367_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ES.5269.12	chr11	+	1214	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	459	-322	-37	322	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGTGGTAAAAGGACTG	5187	False	NA	NA	False	ATTAAA	-19	NA	69882427	69886099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ES.5269.13	chr11	+	2266	9	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018572.11	novel	2214	4	NA	NA	-36	0	multi-exon	FALSE	canonical	0	0	junction_4	352.466310446828	413	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	5188	False	NA	15	True	AATAAA	-25	NA	69882428	69890834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284_69885367_69885456_69885515_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.14	chr11	+	1000	3	FSM	ENSMUSG00000018567.15	ENSMUST00000144443.2	932	3	-65	-3	-20	-2	multi-exon	FALSE	canonical	3	916	junction_1	30.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGAATTGAATTTGCCC	5204	False	NA	3	True	AATAAA	-13	NA	69882444	69885764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69882629_69883190_69883527_69885284
ES.5269.15	chr11	+	2136	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	-127	-3	-127	3	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTCCTATTTGGGGA	2190	False	NA	19	True	AATAAA	-29	NA	69886475	69890838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.16	chr11	+	1803	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	-21	224	-21	20	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCTCCCGTTTACTTT	2296	False	NA	26	True	TATAAA	-36	NA	69886581	69890611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.17	chr11	+	1768	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-63	1	36	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	2353	False	NA	15	True	AATAAA	-25	NA	69886638	69890834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ES.5269.18	chr11	+	1533	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-52	225	47	19	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCCGTTTACTT	2364	False	NA	25	True	TATAAA	-35	NA	69886649	69890610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ES.5269.19	chr11	+	866	3	NNC	ENSMUSG00000018572.11	novel	2006	5	NA	NA	49	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	286.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCCGTTTACTT	2366	False	NA	25	True	TATAAA	-35	NA	69886651	69890610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69886788_69889775_69889959_69890063
ES.5269.2	chr11	+	2101	9	Fusion	ENSMUSG00002075075.1_ENSMUSG00000018559.17	novel	1627	8	NA	NA	83	-3	multi-exon	FALSE	canonical	0	0	junction_1	66.5628227691705	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCCCTAGACCCTTC	NA	False	NA	NA	False	TTTAAA	-24	NA	69871600	69881424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872412_69873054_69873151_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ES.5269.20	chr11	+	1841	4	NIC	ENSMUSG00000018572.11	novel	2006	5	NA	NA	-43	18	intron_retention	FALSE	canonical	3	427	junction_2	61.4835117915545	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTCTCCCGTTTACT	2373	False	NA	24	True	TATAAA	-34	NA	69886658	69890609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69886880_69888422_69888665_69889126_69889959_69890063
ES.5269.21	chr11	+	2506	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	63	-563	-36	563	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGGCGGGGACCTCG	2380	False	NA	NA	False	NA	NA	NA	69886665	69891398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.22	chr11	+	1596	4	ISM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-34	249	-34	-5	intron_retention	FALSE	canonical	3	83	junction_3	210.020633906925	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGCACTCCCCTCAT	2382	False	NA	1	True	TATAAA	-11	NA	69886667	69890586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327
ES.5269.23	chr11	+	2029	6	NNC	ENSMUSG00000018572.11	novel	2006	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	264.756945140255	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCCTTGTCCTATT	2400	False	NA	13	True	AATAAA	-23	NA	69886685	69890832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69886880_69888422_69888455_69888571_69888665_69888889_69888999_69889126_69889959_69890063
ES.5269.24	chr11	+	2154	4	NIC	ENSMUSG00000018572.11	novel	2006	5	NA	NA	-10	19	intron_retention	FALSE	canonical	3	468	junction_1	49.0328687945364	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCCGTTTACTT	2406	False	NA	25	True	TATAAA	-35	NA	69886691	69890610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69886880_69888422_69888455_69888571_69889959_69890063
ES.5269.25	chr11	+	1523	5	NNC	ENSMUSG00000018572.11	novel	2214	4	NA	NA	-180	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.354832465644	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGCACTCCCCTCAT	2748	False	NA	1	True	TATAAA	-11	NA	69887033	69890586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69887077_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.26	chr11	+	1828	5	NIC	ENSMUSG00000018572.11	novel	1797	5	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	233.93588865328	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	3477	False	NA	15	True	AATAAA	-25	NA	69887762	69890834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69887863_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.27	chr11	+	1597	5	NNC	ENSMUSG00000018572.11	novel	1797	5	NA	NA	9	16	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	233.098155290856	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTCTCTCCCGTTTA	3506	False	NA	22	True	TATAAA	-32	NA	69887791	69890607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69887888_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.29	chr11	+	1648	4	FSM	ENSMUSG00000018572.11	ENSMUST00000135814.2	2214	4	342	224	342	17	multi-exon	FALSE	canonical	3	427	junction_2	68.3585319392458	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCTCTCCCGTTTAC	3991	False	NA	23	True	TATAAA	-33	NA	69888276	69890608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69888455_69888571_69888665_69889126_69889959_69890063
ES.5269.3	chr11	+	1999	8	FSM	ENSMUSG00002075075.1_ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	-375	3	89	-3	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCCCTAGACCCTTC	NA	False	NA	NA	False	TTTAAA	-24	NA	69871606	69881424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ES.5269.30	chr11	+	1754	3	NIC	ENSMUSG00000018572.11	novel	2214	4	NA	NA	355	19	intron_retention	FALSE	canonical	3	427	junction_1	73	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTCTCCCGTTTACTT	4004	False	NA	25	True	TATAAA	-35	NA	69888289	69890610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69888665_69889126_69889959_69890063
ES.5269.31	chr11	+	1962	3	NIC	ENSMUSG00000018572.11	novel	1797	5	NA	NA	371	0	intron_retention	FALSE	canonical	3	427	junction_1	73	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTGTCCTATTTG	4020	False	NA	15	True	AATAAA	-25	NA	69888305	69890834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69888665_69889126_69889959_69890063
ES.5269.32	chr11	+	3625	15	FSM	ENSMUSG00000018572.11_ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-649	-8	-649	8	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTCCTTTCTTTG	6486	False	NA	20	True	AATAAA	-24	NA	69890771	69900945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.33	chr11	+	2366	13	NNC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-50	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.170452437799	609	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7085	False	NA	10	True	AATAAA	-14	NA	69891370	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891437_69896280_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.34	chr11	+	4231	12	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	488	junction_3	22.2223921021973	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7097	False	NA	10	True	AATAAA	-14	NA	69891382	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.35	chr11	+	3142	14	ISM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-28	2	-28	-2	intron_retention	FALSE	canonical	3	488	junction_4	31.667839695911	609	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7107	False	NA	10	True	AATAAA	-14	NA	69891392	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602
ES.5269.37	chr11	+	1116	2	NNC	ENSMUSG00000020888.17	novel	1010	5	NA	NA	-26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	609	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCCCAAGCCTCTGG	7109	False	NA	8	True	AATAAA	-12	NA	69891394	69900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891693_69900115
ES.5269.38	chr11	+	2975	15	NNC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	144.178053893406	609	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7110	False	NA	12	True	AATAAA	-16	NA	69891395	69900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896280_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.4	chr11	+	1717	9	Fusion	ENSMUSG00002075075.1_ENSMUSG00000018559.17	novel	1627	8	NA	NA	115	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	51.0489960724009	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTGATCTAATTCTT	NA	False	NA	NA	False	TTTAAA	-10	NA	69871632	69881226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69871718_69871775_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ES.5269.40	chr11	+	3850	14	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-17	3	intron_retention	FALSE	canonical	3	488	junction_4	26.423720740113	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7118	False	NA	15	True	AATAAA	-19	NA	69891403	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.41	chr11	+	3449	13	ISM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	-17	0	-17	0	intron_retention	FALSE	canonical	3	488	junction_4	32.5444140965679	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7118	False	NA	12	True	AATAAA	-16	NA	69891403	69900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106
ES.5269.42	chr11	+	3578	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	488	junction_3	28.6660610401142	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7119	False	NA	10	True	AATAAA	-14	NA	69891404	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.43	chr11	+	3092	14	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-14	3	intron_retention	FALSE	canonical	3	488	junction_4	31.6431657839162	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7121	False	NA	15	True	AATAAA	-19	NA	69891406	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.44	chr11	+	4536	11	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-14	3	intron_retention	FALSE	canonical	3	521	junction_7	12.6051576745394	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7121	False	NA	15	True	AATAAA	-19	NA	69891406	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.45	chr11	+	4517	10	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	521	junction_7	17.7388462608668	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7127	False	NA	12	True	AATAAA	-16	NA	69891412	69900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602
ES.5269.46	chr11	+	3538	12	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	488	junction_4	33.9418559713057	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCCCAAGCCTCTGG	7132	False	NA	8	True	AATAAA	-12	NA	69891417	69900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106
ES.5269.47	chr11	+	4146	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	488	junction_4	27.2369999571661	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7133	False	NA	10	True	AATAAA	-14	NA	69891418	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.48	chr11	+	2957	15	NNC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	143.986411632119	608	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACTCCCCAAGCCTCTG	7135	False	NA	7	True	AATAAA	-11	NA	69891420	69900932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899816_69899969
ES.5269.49	chr11	+	4544	11	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	0	3	intron_retention	FALSE	canonical	3	521	junction_8	16.5541535573402	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7135	False	NA	15	True	AATAAA	-19	NA	69891420	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.5	chr11	+	3782	12	Fusion	ENSMUSG00002075075.1_ENSMUSG00000018567.15_ENSMUSG00000018559.17	novel	1627	8	NA	NA	116	0	multi-exon	FALSE	non_canonical	0	0	junction_1	346.174536783622	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	NA	False	NA	16	True	AATAAA	-26	NA	69871633	69885777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872193_69872277_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802_69882629_69883190_69883270_69883407_69883527_69885284
ES.5269.50	chr11	+	3250	14	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	1	3	intron_retention	FALSE	canonical	3	488	junction_3	27.8080912834449	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7136	False	NA	15	True	AATAAA	-19	NA	69891421	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.51	chr11	+	4307	11	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	521	junction_7	16.4684546937471	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7136	False	NA	10	True	AATAAA	-14	NA	69891421	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896624_69896763_69896855_69896961_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.53	chr11	+	3286	14	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	1	3	intron_retention	FALSE	canonical	3	488	junction_4	31.2714778263482	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7136	False	NA	15	True	AATAAA	-19	NA	69891421	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.55	chr11	+	2850	15	NNC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	144.235281143452	608	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7136	False	NA	12	True	AATAAA	-16	NA	69891421	69900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899170_69899602_69899822_69899969
ES.5269.56	chr11	+	3345	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	488	junction_4	31.5448314132266	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7148	False	NA	10	True	AATAAA	-14	NA	69891433	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898978_69899106_69899822_69899969
ES.5269.58	chr11	+	2732	16	NNC	ENSMUSG00000020888.17	novel	5037	16	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	138.462606263689	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCTCTGGCTCCTTTC	7150	False	NA	16	True	AATAAA	-20	NA	69891435	69900941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969_69900066_69900290
ES.5269.59	chr11	+	4240	12	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	521	junction_9	22.6277822361278	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7154	False	NA	10	True	AATAAA	-14	NA	69891439	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.6	chr11	+	3859	11	Fusion	ENSMUSG00002075075.1_ENSMUSG00000018567.15_ENSMUSG00000018559.17	novel	1627	8	NA	NA	119	-5	multi-exon	FALSE	canonical	3	123	junction_4	345.23319654981	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTTGCCCTGTGTCAT	NA	False	NA	11	True	AATAAA	-21	NA	69871636	69885772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802_69882629_69883190_69883270_69883407_69883527_69885284
ES.5269.60	chr11	+	4404	12	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	488	junction_3	22.2599221074874	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCCCCAAGCCTCTGGC	7154	False	NA	9	True	AATAAA	-13	NA	69891439	69900934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.61	chr11	+	4831	8	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-3	3	intron_retention	FALSE	canonical	3	521	junction_4	14.3697528134052	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7154	False	NA	15	True	AATAAA	-19	NA	69891439	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896624_69896763_69897257_69897339_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.62	chr11	+	4949	9	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	521	junction_6	13.5738719604982	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	7155	False	NA	10	True	AATAAA	-14	NA	69891440	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.63	chr11	+	3212	13	NIC	ENSMUSG00000020888.17	novel	5037	16	NA	NA	-44	3	intron_retention	FALSE	canonical	3	488	junction_4	32.503418623619	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCCTCTGGCTCCTTT	7317	False	NA	15	True	AATAAA	-19	NA	69891602	69900940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.64	chr11	+	3215	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	488	junction_4	32.4525294340313	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCCCCAAGCCTCTGGC	7330	False	NA	9	True	AATAAA	-13	NA	69891615	69900934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69899822_69899969
ES.5269.66	chr11	+	2917	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	488	junction_4	32.3376285806833	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7354	False	NA	12	True	AATAAA	-16	NA	69891639	69900937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.67	chr11	+	4541	8	NIC	ENSMUSG00000020888.17	novel	5037	16	NA	NA	-3	1	intron_retention	FALSE	canonical	3	525	junction_1	12.5063249304225	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAAGCCTCTGGCTCCT	7358	False	NA	13	True	AATAAA	-17	NA	69891643	69900938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896624_69896763_69896855_69896961_69898978_69899106_69899287_69899602_69899822_69899969
ES.5269.68	chr11	+	4358	11	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	0	-4	intron_retention	FALSE	canonical	3	488	junction_4	27.6638753611998	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCCCAAGCCTCTGG	7361	False	NA	8	True	AATAAA	-12	NA	69891646	69900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898770_69898845_69898978_69899106
ES.5269.69	chr11	+	3158	13	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	488	junction_3	28.9223097279591	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCCCAAGCCTCTGG	7369	False	NA	8	True	AATAAA	-12	NA	69891654	69900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69891853_69895630_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602
ES.5269.7	chr11	+	3507	12	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018559.17	novel	1627	8	NA	NA	-87	4	multi-exon	FALSE	non_canonical	0	0	junction_6	352.632531793847	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAATTTGCCCTGTGTC	NA	False	NA	9	True	AATAAA	-19	NA	69871894	69885770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879762_69880307_69880393_69880802_69882629_69883190_69883270_69883407_69883527_69885284_69885343_69885430
ES.5269.70	chr11	+	3418	14	NNC	ENSMUSG00000020888.17	novel	5037	16	NA	NA	-1540	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	149.605319020715	608	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCTCTGGCTCCTTTC	NA	False	NA	16	True	AATAAA	-20	NA	69894743	69900941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899278_69899602_69899822_69899969
ES.5269.71	chr11	+	3991	11	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-654	-4	intron_retention	FALSE	canonical	3	488	junction_2	22.9671504545078	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCCCAAGCCTCTGG	598	False	NA	8	True	AATAAA	-12	NA	69895629	69900933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
ES.5269.73	chr11	+	1716	9	NNC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	-582	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	184.756596634599	608	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCCAAGCCTCTGGCT	2192	False	NA	10	True	AATAAA	-14	NA	69897223	69900935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969_69900066_69900153
ES.5269.74	chr11	+	2494	4	NNC	ENSMUSG00000020888.17	novel	5037	16	NA	NA	2163	-364	intron_retention	FALSE	canonical	0	0	junction_2	2.16024689946929	608	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGGGGCTTCGAGGCT	4937	False	NA	NA	False	NA	NA	NA	69899968	69902763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69901604_69901702_69901930_69902025_69902072_69902177
ES.5269.8	chr11	+	1738	10	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018559.17	novel	1627	8	NA	NA	-52	4	multi-exon	FALSE	canonical	0	0	junction_7	321.928486806129	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAATTTGCCCTGTGTC	NA	False	NA	9	True	AATAAA	-19	NA	69871929	69885770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69883190_69883270_69883407_69883527_69885284
ES.5269.9	chr11	+	3408	12	Fusion	ENSMUSG00000018567.15_ENSMUSG00000018559.17	novel	1627	8	NA	NA	30	-5	multi-exon	FALSE	non_canonical	0	0	junction_1	346.174536783622	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTTGCCCTGTGTCAT	NA	False	NA	11	True	AATAAA	-21	NA	69872011	69885772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_69872201_69872276_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802_69882629_69883190_69883270_69883407_69883527_69885284
ES.527.1	chr1	+	175	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5268	False	NA	NA	False	NA	NA	NA	58510416	58510591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58510400_58510600
ES.5270.1	chr11	+	4214	1	FSM	ENSMUSG00000065534.3	ENSMUST00000083600.3	89	1	75	-4200	75	4200	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCTAGTTTTTTTGTT	1072	False	NA	NA	False	NA	NA	NA	69902943	69907157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69902900_69907200
ES.5270.2	chr11	+	191	1	FSM	ENSMUSG00000065534.3	ENSMUST00000083600.3	89	1	75	-177	75	177	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCACTGTGGTTCTTCA	1072	False	NA	NA	False	NA	NA	NA	69902943	69903134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69902900_69903100
ES.5270.3	chr11	+	3864	1	FSM	ENSMUSG00000065534.3	ENSMUST00000083600.3	89	1	77	-3852	77	3852	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAACTTTATGTGTG	1074	False	NA	NA	False	AATACA	-30	NA	69902945	69906809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_69902900_69906800
ES.5271.1	chr11	-	3636	23	NIC	ENSMUSG00000005237.15	novel	13569	85	NA	NA	19327	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1.49171264376563	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCAAGTCTCTCAATGAT	NA	False	NA	NA	False	AGTAAA	-17	NA	69337193	69311634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69311974_69312095_69312247_69312387_69312463_69312555_69312733_69313344_69313460_69313581_69313734_69313806_69314036_69314332_69314518_69320127_69320319_69321299_69321484_69321575_69321725_69321884_69322072_69323679_69323807_69326029_69326230_69326379_69326525_69326658_69326793_69326963_69327113_69327309_69327461_69327606_69327674_69327747_69327897_69327996_69328123_69328622_69328788_69337104
ES.5271.10	chr11	-	2682	14	NNC	ENSMUSG00000005237.15	novel	2616	14	NA	NA	-1970	1741	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	3.83228267910189	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATCGCTTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	69437352	69405066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69407842_69407931_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69423194_69423254_69430223_69430391_69435202_69435383_69437275
ES.5271.11	chr11	-	2716	14	NNC	ENSMUSG00000005237.15	novel	2616	14	NA	NA	-2018	1736	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	2.02353022122552	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGATAGCTATCGCTTCT	NA	False	NA	NA	False	NA	NA	NA	69437400	69405071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69407842_69407931_69408396_69408555_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69423194_69423254_69435202_69435383_69437275
ES.5271.12	chr11	-	178	1	Intergenic	novelGene_4136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6525	False	NA	NA	False	NA	NA	NA	69413815	69413637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69413600_69413800
ES.5271.2	chr11	-	3835	19	NIC	ENSMUSG00000005237.15	novel	13569	85	NA	NA	12372	-10983	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.74713168816849	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCACAGTCTTACTGGGT	6569	False	NA	NA	False	NA	NA	NA	69344148	69322617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69323807_69326029_69326230_69326379_69326525_69326658_69326793_69326963_69327113_69327309_69327461_69327606_69327674_69327747_69327897_69327996_69328123_69328622_69328788_69337104_69337222_69337400_69337571_69338621_69338764_69338939_69339057_69339217_69339429_69341824_69341965_69343232_69343373_69343643_69343805_69343986
ES.5271.3	chr11	-	2875	16	NNC	ENSMUSG00000005237.15	novel	696	5	NA	NA	-2014	-18681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.7273761995985	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCTCAGCTATATCAAG	NA	False	NA	NA	False	NA	NA	NA	69437396	69330315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69330324_69405083_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69407842_69407931_69408396_69408555_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69423194_69423254_69430223_69430391_69435202_69435383_69437275
ES.5271.4	chr11	-	2857	16	NNC	ENSMUSG00000005237.15	novel	696	5	NA	NA	-2014	-18681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.83782345723313	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCTCAGCTATATCAAG	NA	False	NA	NA	False	NA	NA	NA	69437396	69330315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69330324_69405083_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69407842_69407931_69408396_69408555_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69423194_69423254_69426540_69426690_69435202_69435383_69437275
ES.5271.5	chr11	-	2575	9	NIC	ENSMUSG00000005237.15	novel	13704	86	NA	NA	-12033	231	intron_retention	FALSE	canonical	0	0	junction_1	1.5612494995996	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCCTGCTCCTGCCTCT	1613	False	NA	NA	False	NA	NA	NA	69368553	69355204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69356626_69364177_69364304_69364545_69364699_69365025_69365154_69366291_69366473_69367153_69367344_69367441_69367546_69367985_69368175_69368470
ES.5271.6	chr11	-	181	1	Intergenic	novelGene_4134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGTTAAGGAAAAT	9033	False	NA	NA	False	NA	NA	NA	69359038	69358857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69358900_69359000
ES.5271.7	chr11	-	3846	18	ISM	ENSMUSG00000005237.15	ENSMUST00000108659.2	13704	86	57234	51523	24881	-7722	internal_fragment	TRUE	canonical	0	0	junction_11	1.211250604822	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCTTTTTTATTACAT	NA	False	NA	NA	False	ATTAAA	-14	NA	69382700	69363157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69364304_69364545_69364699_69365025_69365154_69366291_69366473_69367153_69367344_69367441_69367546_69367985_69368175_69368470_69368582_69368850_69368977_69369548_69369651_69370270_69370489_69374063_69374203_69374520_69374702_69374809_69374893_69375018_69375176_69377784_69377889_69377997_69378160_69382328
ES.5271.8	chr11	-	2805	1	NIC	ENSMUSG00000005237.15	novel	13569	85	NA	NA	-9442	-7722	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCTTTTTTATTACAT	4204	False	NA	NA	False	ATTAAA	-14	NA	69365962	69363157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69363200_69366000
ES.5271.9	chr11	-	175	1	Intergenic	novelGene_4135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAGAG	9097	False	NA	NA	False	NA	NA	NA	69386590	69386415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69386400_69386600
ES.5272.1	chr11	-	7101	4	ISM	ENSMUSG00000003934.6_ENSMUSG00000041346.12	ENSMUST00000004036.6	3183	5	-1719	0	-1719	0	intron_retention	FALSE	canonical	3	9	junction_2	1.88561808316413	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAGGCTGGAAAATGAC	NA	False	NA	1	True	TTTAAA	-7	NA	69452750	69444917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025
ES.5272.10	chr11	-	2113	8	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	-13	-3	intron_retention	FALSE	canonical	3	103	junction_4	28.9869780756667	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGAGTCATTGTGTCT	NA	False	NA	-7	True	TATAAA	-12	NA	69470163	69452587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ES.5272.2	chr11	-	3210	5	FSM	ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	-40	13	-40	-13	multi-exon	FALSE	canonical	3	7	junction_4	2.17944947177034	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAGTTGACCAGAAG	NA	False	NA	-12	True	NA	NA	NA	69451071	69444930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69450517
ES.5272.3	chr11	-	2939	7	Fusion	ENSMUSG00000003934.6_ENSMUSG00000041346.12	novel	3183	5	NA	NA	1445	-32	multi-exon	FALSE	canonical	0	0	junction_4	83.2260976697414	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAAAAC	NA	False	NA	-31	True	NA	NA	NA	69453303	69444949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69452765_69452846_69452947_69453086_69453219
ES.5272.4	chr11	-	2140	8	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	-1	3	intron_retention	FALSE	canonical	3	103	junction_4	26.6159381436256	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATTGTGTCTGTTCGGG	NA	False	NA	0	True	TATAAA	-19	NA	69470151	69452580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69452846_69452947_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ES.5272.5	chr11	-	1909	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	-14	-4	-14	3	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATTGTGTCTGTTCGGG	NA	False	NA	0	True	TATAAA	-19	NA	69470164	69452580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ES.5272.7	chr11	-	3649	7	FSM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	-2662	-2	-2662	2	multi-exon	FALSE	canonical	3	9	junction_4	61.2880267443995	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATTGTGTCTGTTCGG	NA	False	NA	-1	True	TATAAA	-18	NA	69457410	69452581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454145_69454263_69454372_69454464_69454684
ES.5272.8	chr11	-	2042	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	-46	2	intron_retention	FALSE	canonical	3	103	junction_5	28.1236110768159	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATTGTGTCTGTTCGG	NA	False	NA	-1	True	TATAAA	-18	NA	69470196	69452581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ES.5273.1	chr11	-	3030	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-179	-9	-66	9	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGTGTGCTTGTCTTT	NA	False	NA	2	True	AATAAA	-42	NA	69496834	69490552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
ES.5273.2	chr11	-	4687	6	FSM	ENSMUSG00000041329.14	ENSMUST00000144425.2	711	6	-2346	-1630	-17	8	multi-exon	FALSE	canonical	3	193	junction_2	3.13687742827162	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGCTTGTCTT	NA	False	NA	1	True	AATAAA	-41	NA	69496785	69490553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250
ES.5273.4	chr11	-	2979	7	NNC	ENSMUSG00000041329.14	novel	3751	6	NA	NA	-17	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.8531628231289	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCCTGTGTGTGCTTGT	NA	False	NA	-2	True	AATAAA	-38	NA	69496785	69490556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69492239_69492350_69492446_69493244_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
ES.5273.5	chr11	-	2849	6	NIC	ENSMUSG00000041329.14	novel	2842	7	NA	NA	-21	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	76.8598724953405	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGAGCCCTGTGTGTGCT	NA	False	NA	-5	True	AATAAA	-35	NA	69496789	69490559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69496086
ES.5273.6	chr11	-	2041	8	NNC	ENSMUSG00000041329.14	novel	2842	7	NA	NA	-17	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.2881051583835	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAATGTATATCATACA	NA	False	NA	-23	True	AATAAA	-17	NA	69496785	69490577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69491083_69491997_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
ES.5273.7	chr11	-	1588	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	-130	1384	-17	238	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTCCTCAACTTCT	NA	False	NA	NA	False	AATAGA	-22	NA	69496785	69491945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
ES.5274.1	chr11	-	222	1	Intergenic	novelGene_4141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACAACCTGAGTTGGG	NA	False	NA	NA	False	AAGAAA	-15	NA	69510634	69510412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69510400_69510600
ES.5275.1	chr11	-	291	1	Intergenic	novelGene_4143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCGATCC	4860	False	NA	NA	False	NA	NA	NA	69518366	69518075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69518100_69518400
ES.5275.2	chr11	-	185	1	Intergenic	novelGene_4144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAGAGCAAACAGGG	4859	False	NA	NA	False	NA	NA	NA	69518367	69518182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69518200_69518400
ES.5276.1	chr11	-	1766	1	FSM	ENSMUSG00000080573.3	ENSMUST00000116923.3	120	1	39	-1685	39	1685	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	69526306	69524540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69524500_69526300
ES.5277.1	chr11	-	173	1	Intergenic	novelGene_4145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	69528992	69528819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69528800_69529000
ES.5278.1	chr11	-	2968	10	Antisense	novelGene_ENSMUSG00000018765.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2720	False	NA	NA	False	NA	NA	NA	69543786	69533612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69534779_69539628_69540054_69540552_69540667_69541290_69541373_69541666_69541898_69542063_69542260_69542345_69542546_69542801_69542905_69543039_69543132_69543427
ES.5278.2	chr11	-	2923	9	Antisense	novelGene_ENSMUSG00000018765.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCCTTGAACTCACAGA	2720	False	NA	NA	False	NA	NA	NA	69543786	69534275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69534784_69539632_69539800_69539973_69540054_69540552_69541373_69541666_69542260_69542345_69542548_69542801_69542898_69543033_69543132_69543427
ES.5278.3	chr11	-	5278	10	Antisense	novelGene_ENSMUSG00000018765.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCGTGGTGGCACACA	2720	False	NA	NA	False	NA	NA	NA	69543786	69535976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69539800_69539973_69540054_69540552_69540667_69541291_69541373_69541666_69541900_69542066_69542260_69542345_69542548_69542801_69542898_69543033_69543131_69543427
ES.5278.4	chr11	-	181	1	Intergenic	novelGene_4146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	8262	False	NA	NA	False	NA	NA	NA	69538244	69538063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69538100_69538200
ES.5278.5	chr11	-	156	1	Intergenic	novelGene_4147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATAAATA	7676	False	NA	NA	False	NA	NA	NA	69538830	69538674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69538700_69538800
ES.5279.1	chr11	-	1312	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	5	4	5	-4	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTTTAGTGTGCA	6766	False	NA	-8	True	AATAAA	-29	NA	69553463	69547526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ES.5279.10	chr11	-	1255	7	NNC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	238.147713264968	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAAATTGTGTTTAGTGT	6813	False	NA	-11	True	AATAAA	-26	NA	69553416	69547529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548768_69548848_69549391_69549525_69549636_69549703_69553294
ES.5279.11	chr11	-	2084	3	NIC	ENSMUSG00000018761.15	novel	664	4	NA	NA	322	-17	intron_retention	FALSE	canonical	3	628	junction_1	2.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTGTACAAAATTG	6082	False	NA	-21	True	AATAAA	-16	NA	69549909	69547539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69548357_69548550_69548670_69548761
ES.5279.12	chr11	-	1281	7	NNC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	14	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	238.511646582626	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTGTACAAAATTG	6775	False	NA	-21	True	AATAAA	-16	NA	69553454	69547539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69548155_69548245_69548348_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ES.5279.14	chr11	-	1885	5	NIC	ENSMUSG00000018761.15	novel	646	6	NA	NA	-2	-19	intron_retention	FALSE	canonical	3	628	junction_2	18.6597829569371	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTTTAATTGTACAAAAT	6814	False	NA	-23	True	AATAAA	-14	NA	69553415	69547541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69548155_69548245_69548357_69548550_69549525_69549636_69549703_69553294
ES.5279.15	chr11	-	3278	2	NNC	ENSMUSG00000018761.15	novel	818	2	NA	NA	-1	-19	intron_retention	TRUE	non_canonical	0	0	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTTTAATTGTACAAAAT	6815	False	NA	-23	True	AATAAA	-14	NA	69553414	69547541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69550291_69552885
ES.5279.16	chr11	-	3319	5	NNC	ENSMUSG00000018761.15	novel	664	4	NA	NA	1430	-20	intron_retention	FALSE	non_canonical	0	0	junction_4	280.203832058022	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTTTTAATTGTACAAAA	8329	False	NA	-24	True	AATAAA	-13	NA	69551900	69547542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69550277_69550938
ES.5279.17	chr11	-	189	1	Intergenic	novelGene_4148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAGTAAATGAT	8038	False	NA	NA	False	NA	NA	NA	69552191	69552002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69552000_69552200
ES.5279.2	chr11	-	1322	7	NNC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	234.139144290076	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTTTAGTGTGCA	6777	False	NA	-8	True	AATAAA	-29	NA	69553452	69547526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69548176_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ES.5279.5	chr11	-	2009	4	NIC	ENSMUSG00000018761.15	novel	646	6	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	628	junction_2	20.8326666559997	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6815	False	NA	-10	True	AATAAA	-27	NA	69553414	69547528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69548155_69548245_69548357_69548550_69549703_69553294
ES.5279.6	chr11	-	1320	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-215	-459	-91	-6	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6670	False	NA	-10	True	AATAAA	-27	NA	69553559	69547528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
ES.5279.7	chr11	-	1545	7	NNC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	241.457840810542	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6793	False	NA	-10	True	AATAAA	-27	NA	69553436	69547528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69549110_69549391_69549525_69549636_69549703_69553294
ES.5279.8	chr11	-	1409	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	-114	-324	-59	-6	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6702	False	NA	-10	True	AATAAA	-27	NA	69553527	69547528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
ES.5279.9	chr11	-	1860	6	NIC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	628	junction_2	17.9844377170931	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGTGTTTAGTGTG	6760	False	NA	-10	True	AATAAA	-27	NA	69553469	69547528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69549525_69549636_69549703_69553294
ES.528.1	chr1	+	153	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTGCCA	NA	False	NA	NA	False	NA	NA	NA	58517936	58518089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58517900_58518100
ES.5280.1	chr11	-	3781	16	Fusion	ENSMUSG00000018774.14_ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-1	multi-exon	TRUE	canonical	3	102	junction_5	6310.40876295312	4045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTCTTTCCTCATTA	NA	False	NA	-2	True	AATAAA	-18	NA	69563139	69555039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.10	chr11	-	1870	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	-95	-1	11	1	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGCTTCTTGTTTCTTT	NA	False	NA	65	True	AATAAA	-20	NA	69563238	69557760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.102	chr11	-	3139	6	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-63	intron_retention	FALSE	canonical	3	9657	junction_5	1876.18747464106	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTTTAGACACCCTT	NA	False	NA	-2	True	AATAAA	-32	NA	69563139	69558110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69561574_69561753_69561803_69563104
ES.5280.103	chr11	-	3349	21	Fusion	ENSMUSG00000005204.13_ENSMUSG00000059796.17	novel	2313	11	NA	NA	-66	-64	multi-exon	FALSE	canonical	1	2	junction_10	6410.48664611354	4700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACATTTTAGACACCCT	8464	False	NA	-3	True	AATAAA	-31	NA	69572738	69558111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69564355_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.104	chr11	-	5026	1	FSM	ENSMUSG00000089542.3	ENSMUST00000158917.3	144	1	-3318	-1564	-3318	1564	mono-exon	FALSE	NA	NA	NA	NA	NA	3997	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAACATTTTAGACACC	NA	False	NA	-5	True	AATAAA	-29	NA	69563139	69558113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558100_69563100
ES.5280.105	chr11	-	4130	7	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	352	0	-66	intron_retention	FALSE	canonical	3	12659	junction_4	783.567057330343	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAACATTTTAGACACC	NA	False	NA	-5	True	AATAAA	-29	NA	69563141	69558113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903
ES.5280.106	chr11	-	2889	6	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-73	intron_retention	FALSE	canonical	3	9657	junction_5	1823.41093558199	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563139	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.107	chr11	-	4860	3	FSM	ENSMUSG00000119662.1_ENSMUSG00000059796.17_ENSMUSG00000089542.3	ENSMUST00000142348.2	855	3	-4078	73	0	-73	multi-exon	FALSE	canonical	3	14148	junction_2	297	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563141	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558444_69558520_69558938_69559021
ES.5280.108	chr11	-	2715	10	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	359	0	-73	intron_retention	FALSE	canonical	3	12659	junction_4	747.862138216515	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563141	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753
ES.5280.109	chr11	-	4939	2	FSM	ENSMUSG00000119662.1_ENSMUSG00000059796.17_ENSMUSG00000089542.3	ENSMUST00000133067.2	753	2	-4028	-158	0	-73	multi-exon	FALSE	canonical	3	14148	junction_1	0	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563143	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558938_69559021
ES.5280.110	chr11	-	2895	9	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	359	0	-73	intron_retention	FALSE	canonical	3	12659	junction_4	768.503578391148	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563141	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ES.5280.111	chr11	-	4540	5	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4	359	2	-73	intron_retention	FALSE	canonical	3	12659	junction_4	814.740756314547	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563139	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230
ES.5280.112	chr11	-	3214	6	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-73	intron_retention	FALSE	canonical	3	9657	junction_5	1877.45267849818	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563139	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561803_69563104
ES.5280.113	chr11	-	3806	6	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-73	intron_retention	FALSE	canonical	3	12659	junction_3	773.565097454636	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAACCGTGAACATTTT	NA	False	NA	-12	True	AATAAA	-22	NA	69563139	69558120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69560073_69560958
ES.5280.116	chr11	-	1485	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	intron_retention	FALSE	canonical	3	9657	junction_9	1387.20502369973	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.117	chr11	-	1393	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-43	-78	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_10	4156.30245410509	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69562091	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562069
ES.5280.12	chr11	-	2020	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1411.88872712327	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.120	chr11	-	1823	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	-78	intron_retention	FALSE	canonical	3	9657	junction_8	1484.80613212635	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563143	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.121	chr11	-	1867	12	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5323.31553305483	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562444_69562906_69563104
ES.5280.122	chr11	-	1579	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	-3	-78	intron_retention	FALSE	canonical	3	9657	junction_8	1546.8323226436	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563146	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.123	chr11	-	1843	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	intron_retention	FALSE	canonical	3	9657	junction_8	1495.737756928	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.125	chr11	-	1422	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	4160.14526669442	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561819_69563104
ES.5280.126	chr11	-	2080	11	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	combination_of_known_junctions	FALSE	canonical	1	9	junction_10	4165.17064356312	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562430
ES.5280.127	chr11	-	1467	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-45	-78	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	4163.39696041586	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69562093	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69561997
ES.5280.128	chr11	-	1394	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4240.16062903282	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559242_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.129	chr11	-	2066	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5541.36332412882	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559905_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562444
ES.5280.130	chr11	-	1657	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	intron_retention	FALSE	canonical	3	9657	junction_9	1411.88872712327	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563143	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.131	chr11	-	2276	8	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	-3	-78	intron_retention	FALSE	canonical	3	13069	junction_3	639.637397280678	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69562559	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753
ES.5280.132	chr11	-	3029	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-78	intron_retention	FALSE	canonical	3	9657	junction_6	1714.0389678573	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.133	chr11	-	2958	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	intron_retention	FALSE	canonical	3	9657	junction_7	1598.96652847509	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.134	chr11	-	1393	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4151.60333485751	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558533_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.135	chr11	-	1328	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	combination_of_known_splicesites	FALSE	canonical	1	69	junction_1	4249.68485106053	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.136	chr11	-	4673	4	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-78	intron_retention	FALSE	canonical	3	13166	junction_3	649.866311038064	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69561574_69561753
ES.5280.14	chr11	-	1946	10	FSM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	-102	1	4	0	multi-exon	FALSE	canonical	3	9657	junction_9	1461.90417007037	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563245	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.140	chr11	-	1748	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	intron_retention	FALSE	canonical	3	9657	junction_9	1410.46163531354	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.142	chr11	-	2636	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	intron_retention	FALSE	canonical	3	9657	junction_8	1495.97659887279	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.144	chr11	-	1399	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4188.67794059176	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558931_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.145	chr11	-	1399	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	6	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4165.61858071523	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563135	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558594_69558843_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.147	chr11	-	2731	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	intron_retention	FALSE	canonical	3	9657	junction_7	1598.9282124509	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.148	chr11	-	1404	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4167.83121059383	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563143	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561797_69563104
ES.5280.149	chr11	-	1266	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-78	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	4352.23842790504	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563139	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69561440_69561574_69561753_69561803_69563104
ES.5280.15	chr11	-	2429	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4167.83121059383	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562444
ES.5280.151	chr11	-	1479	10	FSM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	2	364	0	-78	multi-exon	FALSE	canonical	3	9657	junction_9	1461.90417007037	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.153	chr11	-	3369	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	-79	intron_retention	FALSE	canonical	3	13069	junction_3	638.391990342402	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAAGGAACCGTGAA	NA	False	NA	-18	True	AATAAA	-16	NA	69563141	69558126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753
ES.5280.154	chr11	-	1416	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4164.77308985736	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAAGGAACCGTGAA	NA	False	NA	-18	True	AATAAA	-16	NA	69563141	69558126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561431_69561574_69561753_69561803_69563104
ES.5280.155	chr11	-	2704	8	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-79	intron_retention	FALSE	canonical	3	9657	junction_7	1586.89389843743	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGAAGGAACCGTGAA	NA	False	NA	-18	True	AATAAA	-16	NA	69563139	69558126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.156	chr11	-	1395	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-80	at_least_one_novel_splicesite	FALSE	canonical	1	59	junction_7	4213.86573113098	3996	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAAAGAAGGAACCGTGA	NA	False	NA	-19	True	AATAAA	-15	NA	69563139	69558127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560064_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.158	chr11	-	2469	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-152	-4	86	4	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTCTTCCTTAAGG	8378	False	NA	-1	True	AATAAA	-21	NA	69572824	69563936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.159	chr11	-	4895	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-96	3	intron_retention	FALSE	canonical	3	762	junction_9	86.7832549132224	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTGGTCTTCCTTAAG	8434	False	NA	-2	True	AATAAA	-20	NA	69572768	69563937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.16	chr11	-	1850	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1387.20502369973	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.160	chr11	-	4419	4	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-104	0	intron_retention	FALSE	canonical	3	900	junction_2	22.553639765383	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	9765	False	NA	-5	True	AATAAA	-17	NA	69569617	69563940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69567994_69568798_69568847_69568962_69569111_69569447
ES.5280.161	chr11	-	7729	5	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	64	0	intron_retention	FALSE	canonical	3	923	junction_3	26.6587227751068	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8594	False	NA	-5	True	AATAAA	-17	NA	69572608	69563940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69569111_69569447_69569560_69569647
ES.5280.162	chr11	-	2736	17	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2313	11	NA	NA	-3994	0	multi-exon	FALSE	non_canonical	0	0	junction_16	466.698372713844	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	4298	False	NA	-5	True	AATAAA	-17	NA	69576904	69563940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574076_69574171_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575854_69575957_69576878
ES.5280.163	chr11	-	3428	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-34	0	intron_retention	FALSE	canonical	3	762	junction_9	83.9158896944427	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8496	False	NA	-5	True	AATAAA	-17	NA	69572706	69563940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.164	chr11	-	3343	22	Fusion	ENSMUSG00000005204.13_ENSMUSG00000097328.8	novel	2313	11	NA	NA	-9713	0	multi-exon	FALSE	canonical	2	2	junction_21	463.037535883635	750	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	9574	False	NA	-6	True	AATAAA	-16	NA	69596388	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69596131
ES.5280.165	chr11	-	5994	8	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	762	junction_7	92.333910457687	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8528	False	NA	-6	True	AATAAA	-16	NA	69572674	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69567994_69568798_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.166	chr11	-	2554	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	112	0	intron_retention	FALSE	canonical	3	762	junction_9	86.3109509095664	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8404	False	NA	-6	True	AATAAA	-16	NA	69572798	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.167	chr11	-	2536	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-41	0	intron_retention	FALSE	canonical	3	762	junction_9	67.4346505793975	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8489	False	NA	-6	True	AATAAA	-16	NA	69572713	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.168	chr11	-	3919	10	ISM	ENSMUSG00000018752.20_ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	-557	-5	-557	0	intron_retention	FALSE	canonical	3	868	junction_9	62.3332343037439	713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	7735	False	NA	-6	True	AATAAA	-16	NA	69573467	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968
ES.5280.169	chr11	-	2193	11	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_9	289.302333208704	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8468	False	NA	-6	True	AATAAA	-16	NA	69572734	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69571149_69571677_69572488
ES.5280.170	chr11	-	2275	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	-51	-5	-51	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8241	False	NA	-6	True	AATAAA	-16	NA	69572961	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ES.5280.171	chr11	-	2153	11	NIC	ENSMUSG00000005204.13	novel	2219	11	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_10	360.649081518309	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8273	False	NA	-6	True	AATAAA	-16	NA	69572929	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69569052_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ES.5280.172	chr11	-	2292	11	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	291.295108094867	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8516	False	NA	-6	True	AATAAA	-16	NA	69572686	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569526_69569647_69569888_69570968_69571677_69572488
ES.5280.173	chr11	-	2293	11	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_6	262.845981517694	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8459	False	NA	-6	True	AATAAA	-16	NA	69572743	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69569052_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.174	chr11	-	2303	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	287.717453994945	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8488	False	NA	-6	True	AATAAA	-16	NA	69572714	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.175	chr11	-	1673	8	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-217	0	intron_retention	FALSE	canonical	3	900	junction_5	60.4311043035533	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	9652	False	NA	-6	True	AATAAA	-16	NA	69569730	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647
ES.5280.176	chr11	-	3406	22	Fusion	ENSMUSG00000005204.13_ENSMUSG00000097328.8	novel	2313	11	NA	NA	-66	0	multi-exon	TRUE	canonical	3	10	junction_12	462.316179073485	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	5346	False	NA	-6	True	AATAAA	-16	NA	69586741	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ES.5280.177	chr11	-	4980	9	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-69	0	intron_retention	FALSE	canonical	3	762	junction_8	90.9181465660184	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8461	False	NA	-6	True	AATAAA	-16	NA	69572741	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.178	chr11	-	3991	15	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2313	11	NA	NA	-3901	0	intron_retention	FALSE	canonical	0	0	junction_14	479.616986856838	728	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	4391	False	NA	-6	True	AATAAA	-16	NA	69576811	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69571677_69574076_69574171_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69576723
ES.5280.179	chr11	-	3693	10	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-53	0	intron_retention	FALSE	canonical	0	0	junction_5	404.017326361135	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8477	False	NA	-6	True	AATAAA	-16	NA	69572725	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69565733_69565865_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.180	chr11	-	7768	5	NIC	ENSMUSG00000005204.13	novel	693	6	NA	NA	-71	0	intron_retention	FALSE	canonical	3	923	junction_4	61.2147857955903	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8459	False	NA	-6	True	AATAAA	-16	NA	69572743	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69569111_69569447
ES.5280.181	chr11	-	2510	12	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	369.194969656731	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8467	False	NA	-6	True	AATAAA	-16	NA	69572735	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69565733_69565869_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.185	chr11	-	2393	10	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	301.590516273594	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8434	False	NA	-6	True	AATAAA	-16	NA	69572768	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564499_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.186	chr11	-	3661	9	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	86	0	intron_retention	FALSE	canonical	3	762	junction_8	87.5257105083986	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8378	False	NA	-6	True	AATAAA	-16	NA	69572824	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.187	chr11	-	5947	7	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-48	0	intron_retention	FALSE	canonical	3	762	junction_6	80.7927733291921	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8482	False	NA	-6	True	AATAAA	-16	NA	69572720	69563941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.188	chr11	-	2585	15	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2313	11	NA	NA	-2935	-1	multi-exon	FALSE	canonical	0	0	junction_14	452.325239677137	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAAGTGGTGGTCTTCC	5357	False	NA	-7	True	AATAAA	-15	NA	69575845	69563942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575772
ES.5280.189	chr11	-	4753	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-49	-1	intron_retention	FALSE	canonical	3	107	junction_5	276.396566057531	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAAGTGGTGGTCTTCC	8481	False	NA	-7	True	AATAAA	-15	NA	69572721	69563942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69567994_69568798_69568847_69569052_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.19	chr11	-	1692	12	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4046.99544708915	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69559940_69560016_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.190	chr11	-	4334	14	Fusion	ENSMUSG00000005204.13_ENSMUSG00000097328.8	novel	2313	11	NA	NA	-4653	-1	intron_retention	FALSE	canonical	3	10	junction_11	459.971429521803	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAAGTGGTGGTCTTCC	3639	False	NA	-7	True	AATAAA	-15	NA	69577563	69563942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854
ES.5280.191	chr11	-	3735	4	NIC	ENSMUSG00000005204.13	novel	860	6	NA	NA	-51	-1	intron_retention	FALSE	canonical	3	955	junction_3	16.1314048434171	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAAGTGGTGGTCTTCC	NA	False	NA	-7	True	AATAAA	-15	NA	69568996	69563942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69567994_69568798
ES.5280.192	chr11	-	3655	2	FSM	ENSMUSG00000005204.13	ENSMUST00000142206.2	387	2	-2432	-836	72	-1	multi-exon	FALSE	canonical	3	980	junction_1	0	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAAGTGGTGGTCTTCC	NA	False	NA	-7	True	AATAAA	-15	NA	69567701	69563942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69564924_69565027
ES.5280.194	chr11	-	2316	10	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-71	-2	intron_retention	FALSE	canonical	1	16	junction_8	304.453041241154	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAAGTGGTGGTCTTC	8459	False	NA	-8	True	AATAAA	-14	NA	69572743	69563943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69571149_69571677_69572488
ES.5280.195	chr11	-	3438	23	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2235	13	NA	NA	-9464	-2	multi-exon	FALSE	canonical	2	2	junction_22	459.954956472339	750	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAAGTGGTGGTCTTC	9574	False	NA	-8	True	AATAAA	-14	NA	69596388	69563943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574076_69574171_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69596131
ES.5280.196	chr11	-	2188	8	NIC	ENSMUSG00000005204.13	novel	2219	11	NA	NA	1230	0	intron_retention	FALSE	canonical	3	868	junction_7	41.2171947475461	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	9760	False	NA	-11	True	AATAAA	-11	NA	69571442	69563946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968
ES.5280.197	chr11	-	2213	11	NNC	ENSMUSG00000005204.13	novel	2219	11	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	381.551687193229	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	8305	False	NA	-11	True	AATAAA	-11	NA	69572897	69563946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568955_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ES.5280.198	chr11	-	3198	19	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2219	11	NA	NA	5699	0	multi-exon	FALSE	canonical	2	4	junction_18	468.555492978153	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	266	False	NA	-11	True	AATAAA	-11	NA	69580936	69563946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69574076_69574171_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69580702
ES.5280.199	chr11	-	1795	10	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	1316	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	308.314093493816	710	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGATATGCAAGTGGTGG	9846	False	NA	-13	True	AATAAA	-9	NA	69571356	69563948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570974
ES.5280.2	chr11	-	4818	9	Fusion	ENSMUSG00000018774.14_ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	9657	junction_8	1373.06352274758	4045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTTCTTTCCTCATTA	NA	False	NA	-2	True	AATAAA	-18	NA	69563141	69555039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.200	chr11	-	2242	12	NNC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	122	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	372.01499569882	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGATATGCAAGTGGTGG	8652	False	NA	-13	True	AATAAA	-9	NA	69572550	69563948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572050_69572110_69572488
ES.5280.201	chr11	-	6586	13	Fusion	ENSMUSG00000018752.20_ENSMUSG00000005204.13	novel	2313	11	NA	NA	-3041	-28	intron_retention	FALSE	non_canonical	0	0	junction_9	450.915057287832	728	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTCTGGTCAATAAAGG	5251	False	NA	-39	True	NA	NA	NA	69575951	69563974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69573219_69573515_69575160_69575310_69575359_69575485_69575565_69575854
ES.5280.202	chr11	-	5753	8	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	-40	-54	intron_retention	FALSE	canonical	3	762	junction_7	92.333910457687	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTTTTTTGCTGC	8490	False	NA	NA	False	NA	NA	NA	69572712	69564220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69567994_69568798_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.203	chr11	-	2069	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	-36	280	-36	-54	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTTTTTTTGCTGC	8494	False	NA	NA	False	NA	NA	NA	69572708	69564220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.204	chr11	-	4576	5	Fusion	ENSMUSG00000089669.8_ENSMUSG00000097328.8	novel	1407	6	NA	NA	-4298	274	intron_retention	FALSE	canonical	2	4	junction_4	15.4434452114805	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTATCCGGGAAGTTTG	294	False	NA	NA	False	NA	NA	NA	69580908	69573397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69575163_69575310_69575359_69575485_69577918_69578077_69578203_69580702
ES.5280.205	chr11	-	4528	11	NIC	ENSMUSG00000018752.20	novel	1470	13	NA	NA	34	-2	intron_retention	FALSE	canonical	3	10	junction_2	8.81419309976812	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACTGGTATCCGGG	5197	False	NA	NA	False	NA	NA	NA	69586890	69573404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ES.5280.206	chr11	-	2200	13	NIC	ENSMUSG00000018752.20	novel	2235	13	NA	NA	29	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	8.86119818835655	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACTGGTATCCGG	5192	False	NA	NA	False	NA	NA	NA	69586895	69573405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69574171_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ES.5280.207	chr11	-	3552	12	NIC	ENSMUSG00000018752.20	novel	1470	13	NA	NA	35	0	intron_retention	TRUE	canonical	2	2	junction_11	11.0453610171873	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCCCAAATTCTTTTG	5198	False	NA	-3	True	ATTAAA	-30	NA	69586889	69573873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69574171_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586271_69586421
ES.5280.208	chr11	-	1524	13	FSM	ENSMUSG00000018752.20	ENSMUST00000174159.8	1470	13	-55	1	-55	-1	multi-exon	FALSE	canonical	3	10	junction_3	8.53871900358726	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCCCCAAATTCTTTT	5396	False	NA	-4	True	ATTAAA	-29	NA	69586691	69573874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69574171_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ES.5280.21	chr11	-	2539	6	ISM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	2015	1	581	0	intron_retention	FALSE	canonical	3	13069	junction_4	679.325371232372	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69561128	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903
ES.5280.210	chr11	-	2956	8	NNC	ENSMUSG00000018752.20	novel	2235	13	NA	NA	5844	-3	intron_retention	FALSE	canonical	2	4	junction_7	13.3186994523505	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACAGCCCCAAATTCTT	411	False	NA	-6	True	ATTAAA	-27	NA	69580791	69573876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69574171_69574679_69574819_69575043_69575163_69575310_69575359_69575485_69575565_69575854_69577918_69578077_69578203_69580702
ES.5280.211	chr11	-	1604	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	-267	98	-267	-98	multi-exon	FALSE	canonical	3	19	junction_6	8.13941029804985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTTCAGAGTAACTG	5145	False	NA	NA	False	AATAAA	-16	NA	69586942	69577173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ES.5280.214	chr11	-	918	3	NNC	ENSMUSG00000097328.8	novel	1435	7	NA	NA	5586	-108	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	19.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTTCTTTGGGGTTC	441	False	NA	NA	False	AATAAA	-6	NA	69580761	69577183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69577918_69578077_69578203_69580702
ES.5280.24	chr11	-	2103	4	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	-1253	0	intron_retention	FALSE	canonical	3	13069	junction_2	475.797108953899	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69560368	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69559375_69559469_69559580_69559903
ES.5280.25	chr11	-	2998	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	9657	junction_8	1495.97659887279	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563140	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.26	chr11	-	2197	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_8	1448.11799739351	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.27	chr11	-	3990	4	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	-45	0	intron_retention	FALSE	canonical	3	13166	junction_3	649.866311038064	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562093	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69561574_69561753
ES.5280.28	chr11	-	1733	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4240.16062903282	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559124_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.29	chr11	-	2089	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_8	1486.26448163676	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.30	chr11	-	7708	18	Fusion	ENSMUSG00000005204.13_ENSMUSG00000059796.17	novel	1774	11	NA	NA	-32	0	intron_retention	FALSE	canonical	3	762	junction_17	6389.07702178581	4703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	8498	False	NA	63	True	AATAAA	-18	NA	69572704	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69571677_69572488
ES.5280.31	chr11	-	3321	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	9657	junction_7	1598.96652847509	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.33	chr11	-	1779	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_10	4156.30245410509	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562114	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562069
ES.5280.34	chr11	-	3573	7	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-1	0	intron_retention	FALSE	canonical	3	9657	junction_6	1613.724203684	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563144	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.35	chr11	-	2188	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	9657	junction_8	1565.71404936374	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.36	chr11	-	3392	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	9657	junction_6	1714.0389678573	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.37	chr11	-	1836	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4164.77308985736	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563176	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561129_69561440_69561574_69561753_69561803_69563104
ES.5280.38	chr11	-	1827	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	4163.39696041586	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562090	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69561997
ES.5280.39	chr11	-	2115	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1410.46163531354	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.4	chr11	-	723	5	FSM	ENSMUSG00000018774.14	ENSMUST00000154124.2	612	5	-20	-91	-20	-2	multi-exon	FALSE	canonical	3	24	junction_4	48.9540600971972	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	3321	False	NA	-3	True	AATAAA	-17	NA	69556908	69555040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556845
ES.5280.40	chr11	-	3506	6	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	-33	0	intron_retention	FALSE	canonical	3	9657	junction_5	1723.13493377623	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563176	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.41	chr11	-	5377	1	FSM	ENSMUSG00000089542.3	ENSMUST00000158917.3	144	1	-3318	-1915	-3318	1915	mono-exon	FALSE	NA	NA	NA	NA	NA	4000	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69557800_69563100
ES.5280.42	chr11	-	5113	3	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	13166	junction_2	491	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69561574_69561753
ES.5280.44	chr11	-	2927	5	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_4	1704.38205444085	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563141	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.46	chr11	-	3504	20	Fusion	ENSMUSG00000005204.13_ENSMUSG00000059796.17	novel	1774	11	NA	NA	21	0	multi-exon	FALSE	canonical	0	0	junction_10	6442.03770690412	4703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	8551	False	NA	63	True	AATAAA	-18	NA	69572651	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.47	chr11	-	3324	5	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	9657	junction_4	1810.41450709499	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.48	chr11	-	3722	5	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	9657	junction_4	1700.40215831432	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563145	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.49	chr11	-	3640	6	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	9657	junction_5	1763.57189816577	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563140	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.5	chr11	-	4001	14	Fusion	ENSMUSG00000018774.14_ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	119	junction_3	5676.73498229146	4045	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTCTTTCCTCATT	NA	False	NA	-3	True	AATAAA	-17	NA	69563141	69555040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.50	chr11	-	5293	2	FSM	ENSMUSG00000119662.1_ENSMUSG00000059796.17_ENSMUSG00000089542.3	ENSMUST00000133067.2	753	2	-4024	-516	2	0	multi-exon	FALSE	canonical	3	14148	junction_1	0	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558938_69559021
ES.5280.51	chr11	-	3741	6	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	0	intron_retention	FALSE	canonical	3	13069	junction_3	604.66023517344	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563139	69557762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958
ES.5280.52	chr11	-	1753	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4188.67794059176	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558931_69559029_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.53	chr11	-	1759	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	251	junction_4	4169.07520800477	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559151_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.54	chr11	-	3894	3	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	9657	junction_2	1754.5	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69561574_69561753_69561803_69563104
ES.5280.55	chr11	-	2582	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	9657	junction_6	1574.78239237468	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559375_69559469_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.56	chr11	-	1721	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	337	junction_9	4278.8197518867	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563141	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69563104
ES.5280.57	chr11	-	3416	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	12659	junction_4	725.04271425896	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563143	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753
ES.5280.58	chr11	-	2181	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-1	intron_retention	FALSE	canonical	3	9657	junction_8	1484.80613212635	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.6	chr11	-	1548	4	NIC	ENSMUSG00000018774.14	novel	1230	6	NA	NA	-53	-4	intron_retention	FALSE	canonical	3	102	junction_3	20.8219969156552	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTCCTTTCTTTCCTCA	3197	False	NA	-5	True	AATAAA	-15	NA	69557032	69555042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69555331_69555576_69555748_69555860_69556763_69556845
ES.5280.60	chr11	-	3486	5	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-1	intron_retention	FALSE	canonical	3	9657	junction_4	1714.70383740167	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGGGCTTCTTGTTTC	NA	False	NA	62	True	AATAAA	-17	NA	69563139	69557763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.62	chr11	-	4694	6	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	-2	intron_retention	FALSE	canonical	3	13069	junction_4	692.515703793062	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563141	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753
ES.5280.63	chr11	-	2427	8	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	9657	junction_7	1493.94907434447	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.64	chr11	-	1760	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	4120.88704164528	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563143	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558433_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.66	chr11	-	3249	9	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4	3	2	-2	intron_retention	FALSE	canonical	3	12659	junction_4	768.503578391148	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ES.5280.67	chr11	-	1761	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4151.60333485751	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558526_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.68	chr11	-	2978	2	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	643	-2	intron_retention	FALSE	canonical	3	13227	junction_1	0	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69561066	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69559580_69559903
ES.5280.69	chr11	-	2291	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	9657	junction_8	1496.00271035015	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563141	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561803_69563104
ES.5280.7	chr11	-	694	4	NIC	ENSMUSG00000018774.14	novel	612	5	NA	NA	-28	-10	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	62.8242699033494	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTACTACTCCTTTCTT	3222	False	NA	-11	True	AATAAA	-9	NA	69557007	69555048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69555331_69555576_69555748_69555860_69555940_69556845
ES.5280.71	chr11	-	1760	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4164.77308985736	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561092_69561440_69561574_69561753_69561803_69563104
ES.5280.72	chr11	-	3689	21	Fusion	ENSMUSG00000005204.13_ENSMUSG00000059796.17	novel	2313	11	NA	NA	-59	-2	multi-exon	FALSE	canonical	1	2	junction_10	6410.48664611354	4703	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	8471	False	NA	61	True	AATAAA	-16	NA	69572731	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69564355_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ES.5280.73	chr11	-	2175	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-2	intron_retention	FALSE	canonical	3	9657	junction_7	1385.57722444401	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.74	chr11	-	2094	11	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	-236	-2	combination_of_known_junctions	FALSE	canonical	1	9	junction_10	4165.17064356312	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69562792	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69562430
ES.5280.75	chr11	-	3654	5	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-2	intron_retention	FALSE	canonical	3	9657	junction_4	2035.38674150639	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTGGGCTTCTTGTTT	NA	False	NA	61	True	AATAAA	-16	NA	69563139	69557764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69559375_69559469_69561803_69563104
ES.5280.76	chr11	-	1678	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_5	4212.27325917966	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563138	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559288_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.78	chr11	-	4478	7	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2	4	0	-3	intron_retention	FALSE	canonical	3	12659	junction_4	783.567057330343	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563141	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903
ES.5280.79	chr11	-	5195	3	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-3	intron_retention	FALSE	canonical	3	13069	junction_2	539.5	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563139	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69559375_69559469
ES.5280.8	chr11	-	3864	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	471	intron_retention	FALSE	canonical	3	9657	junction_6	1714.0389678573	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACATCTGCCTTCGGCC	NA	False	NA	NA	False	NA	NA	NA	69563139	69557290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
ES.5280.80	chr11	-	5279	2	ISM	ENSMUSG00000065862.3_ENSMUSG00000059796.17	ENSMUST00000102589.12	813	7	110	-1542	2	-3	intron_retention	FALSE	canonical	3	13069	junction_1	0	4000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563139	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69559375_69559469
ES.5280.81	chr11	-	1615	10	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	5493.9111144369	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563139	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558433_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69561440_69561574_69561753_69561803_69563104
ES.5280.83	chr11	-	1861	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-3	intron_retention	FALSE	canonical	3	9657	junction_9	1476.46728860513	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563139	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.84	chr11	-	3497	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	12659	junction_3	758.79216589288	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGGCTTCTTGTT	NA	False	NA	60	True	AATAAA	-15	NA	69563141	69557765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ES.5280.85	chr11	-	2530	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-4	intron_retention	FALSE	canonical	3	9657	junction_7	1598.75535773224	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563143	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69560073_69560958_69561574_69561753_69561803_69563104
ES.5280.86	chr11	-	5014	4	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	2	-4	intron_retention	FALSE	canonical	3	13069	junction_2	487.39374910504	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563139	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558938_69559021_69559375_69559469_69561574_69561753
ES.5280.87	chr11	-	1698	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	87	junction_8	4140.06534247951	4000	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563141	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561509_69561574_69561753_69561803_69563104
ES.5280.88	chr11	-	3560	5	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	9657	junction_4	1924.59898420424	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563139	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69561574_69561753_69561803_69563104
ES.5280.89	chr11	-	4071	2	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	9657	junction_1	0	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563139	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69561803_69563104
ES.5280.9	chr11	-	5727	1	FSM	ENSMUSG00000089542.3	ENSMUST00000158917.3	144	1	-3318	-2265	-3318	2265	mono-exon	FALSE	NA	NA	NA	NA	NA	4000	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTGGTTGGTTAGGCC	NA	False	NA	NA	False	NA	NA	NA	69563139	69557412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69557400_69563100
ES.5280.90	chr11	-	3236	6	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	9657	junction_5	1727.11349945509	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTTTGGGCTTCTTGT	NA	False	NA	59	True	AATAAA	-14	NA	69563139	69557766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69559580_69559903_69561574_69561753_69561803_69563104
ES.5280.93	chr11	-	4858	4	NIC	ENSMUSG00000059796.17	novel	3167	7	NA	NA	2	-8	intron_retention	FALSE	canonical	3	13166	junction_3	576.218901305938	4000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCCTGTTTGGGCTTC	NA	False	NA	55	True	AATAAA	-10	NA	69563139	69557770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558601_69558847_69558938_69559021_69561574_69561753
ES.5280.94	chr11	-	1613	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	-185	346	-79	-60	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAGACACCCTTTTC	NA	False	NA	1	True	AATAAA	-35	NA	69563328	69558107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.96	chr11	-	1354	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_8	4159.09164241424	3997	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGACACCCTTTT	NA	False	NA	0	True	AATAAA	-34	NA	69563141	69558108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561028_69561440_69561574_69561753_69561803_69563104
ES.5280.97	chr11	-	1414	11	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	4120.88704164528	3997	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGACACCCTTTT	NA	False	NA	0	True	AATAAA	-34	NA	69563141	69558108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558433_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.98	chr11	-	1263	12	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	2	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4046.99544708915	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGACACCCTTTT	NA	False	NA	0	True	AATAAA	-34	NA	69563139	69558108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69558200_69558359_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ES.5280.99	chr11	-	3071	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	-61	intron_retention	FALSE	canonical	3	12659	junction_4	725.04271425896	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGACACCCTTTT	NA	False	NA	0	True	AATAAA	-34	NA	69563143	69558108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753
ES.5281.1	chr11	-	170	1	Intergenic	novelGene_4154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAGCGAACAAGGCC	7817	False	NA	NA	False	NA	NA	NA	69610260	69610090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69610100_69610300
ES.5282.1	chr11	-	149	1	Intergenic	novelGene_4155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATACTT	5424	False	NA	NA	False	NA	NA	NA	69612653	69612504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69612500_69612700
ES.5283.1	chr11	-	175	1	Intergenic	novelGene_4156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCTCAAATA	4688	False	NA	NA	False	NA	NA	NA	69613389	69613214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69613200_69613400
ES.5284.13	chr11	-	4249	17	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-1094	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	96.8203878323156	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69634491	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633728_69634078_69634284_69634416
ES.5284.17	chr11	-	4756	12	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-226	0	intron_retention	FALSE	canonical	3	338	junction_8	31.3347693241077	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69633623	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69633384_69633512
ES.5284.18	chr11	-	6954	28	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	intron_retention	FALSE	canonical	2	202	junction_15	56.6026023724712	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.2	chr11	-	6787	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	-44	-3	-44	3	multi-exon	FALSE	canonical	2	202	junction_15	57.5883527056204	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTACTGACTGCTT	NA	False	NA	0	True	AATAAA	-25	NA	69649507	69624819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.20	chr11	-	6577	28	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	103.74196384168	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649460	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635420_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.22	chr11	-	6875	22	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-4406	0	intron_retention	FALSE	canonical	3	278	junction_19	47.2655450199376	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69637803	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69636969_69637092_69637255_69637523
ES.5284.24	chr11	-	6302	30	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	82.1375980768607	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649465	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69625810_69626249_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.25	chr11	-	3986	10	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	797	0	intron_retention	FALSE	canonical	3	338	junction_7	34.2229437153383	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69632600	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824
ES.5284.27	chr11	-	3150	10	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-3317	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.619156876407	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69636714	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626230_69633197_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394
ES.5284.28	chr11	-	6777	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	101.9009810992	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649503	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634506_69634624_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636395_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.3	chr11	-	6201	26	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	86.7035039661028	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTACTGACTGCTT	NA	False	NA	0	True	AATAAA	-25	NA	69649457	69624819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69636814_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.30	chr11	-	6725	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.9452937951947	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649459	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626486_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.31	chr11	-	8731	27	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_14	83.4474731147131	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634080_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.32	chr11	-	6076	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-5448	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	83.3641125131315	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69638845	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69625972_69626034_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806
ES.5284.33	chr11	-	7070	28	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	intron_retention	FALSE	canonical	2	202	junction_15	58.5581909590372	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.34	chr11	-	5908	27	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-5505	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	86.4055475016116	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69638902	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634995_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806
ES.5284.35	chr11	-	4795	19	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	96.1777707178063	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633264_69637589_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.36	chr11	-	6722	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	83.2874601630291	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635757_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.37	chr11	-	6647	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	80.7150758494827	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633649_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.38	chr11	-	3221	12	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	1387	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	115.176400819721	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69632010	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631149_69631199_69631308_69631824
ES.5284.39	chr11	-	5102	22	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-3455	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_20	92.3005541166977	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTATGTGTACTGAC	NA	False	NA	-5	True	AATAAA	-20	NA	69636852	69624824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69636394_69636528_69636747
ES.5284.4	chr11	-	6721	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	83.3641125131315	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649462	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635882_69636423_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.41	chr11	-	6816	28	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	4	-3	intron_retention	FALSE	canonical	2	202	junction_14	54.0829267233474	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTGTATGTGTACTGA	NA	False	NA	-6	True	AATAAA	-19	NA	69649459	69624825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.43	chr11	-	10120	23	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	-4	intron_retention	FALSE	non_canonical	0	0	junction_19	90.07852405467	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69649457	69624826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69630354_69630704_69630952_69631082_69632839_69633199_69633384_69633512_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69637255_69637523_69637807_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.45	chr11	-	7083	28	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	-4	intron_retention	FALSE	canonical	0	0	junction_18	85.0024610311037	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69649457	69624826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635420_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.46	chr11	-	8604	28	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	-4	intron_retention	FALSE	canonical	2	202	junction_14	58.5921477718752	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69649457	69624826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.50	chr11	-	2411	7	NNC	ENSMUSG00000005198.16	novel	5799	28	NA	NA	1550	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.323145503616	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69631847	69624826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69628046_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824
ES.5284.53	chr11	-	3614	14	NNC	ENSMUSG00000005198.16	novel	5799	28	NA	NA	-888	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	106.595902315861	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGTATGTGTACTG	NA	False	NA	-7	True	AATAAA	-18	NA	69634285	69624826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626164_69627036_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079
ES.5284.56	chr11	-	6706	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	7	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	101.758091489932	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTCTGTATGTGTACT	NA	False	NA	-8	True	AATAAA	-17	NA	69649456	69624827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628376_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648975
ES.5284.57	chr11	-	6857	28	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	-5	intron_retention	FALSE	canonical	0	0	junction_21	84.7140433210602	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTCTGTATGTGTACT	NA	False	NA	-8	True	AATAAA	-17	NA	69649457	69624827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636390_69636528_69636747_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.6	chr11	-	6291	27	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	86.4546602793838	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631233_69632722_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.61	chr11	-	5831	24	NNC	ENSMUSG00000005198.16	novel	5799	28	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	99.0444898219138	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTCTGTATGTGTACT	NA	False	NA	-8	True	AATAAA	-17	NA	69649457	69624827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626594_69630324_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634080_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.62	chr11	-	6718	29	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	83.4746998209881	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTCTGTATGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	69649457	69624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630344_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.63	chr11	-	2696	9	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	2558	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.623012146112	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTCTGTATGTGTAC	499	False	NA	-9	True	AATAAA	-16	NA	69630839	69624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626816_69626986_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704
ES.5284.65	chr11	-	2846	8	NNC	ENSMUSG00000005198.16	novel	5799	28	NA	NA	4	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	97.0505864306374	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTCTGTATGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	69649459	69624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626147_69636831_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.66	chr11	-	6608	30	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	34	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	82.1375980768607	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTCTGTATGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	69649429	69624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956_69649018_69649109
ES.5284.67	chr11	-	4866	16	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-1400	-6	intron_retention	FALSE	canonical	3	309	junction_10	34.5945403528103	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTCTGTATGTGTAC	NA	False	NA	-9	True	AATAAA	-16	NA	69634797	69624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69634284_69634416_69634512_69634628
ES.5284.69	chr11	-	4305	9	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	587	-7	intron_retention	FALSE	canonical	3	319	junction_8	35.3058068878195	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGTCTGTATGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	69632810	69624829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626626_69626726_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69631308_69631824_69632569_69632666
ES.5284.7	chr11	-	3254	5	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-738	0	intron_retention	FALSE	canonical	3	403	junction_4	15.0062486984589	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	2426	False	NA	-3	True	AATAAA	-22	NA	69628912	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69627152_69627600_69627805_69628007
ES.5284.71	chr11	-	5862	20	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-3410	-7	intron_retention	FALSE	canonical	0	0	junction_19	90.9666768002912	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGTCTGTATGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	69636807	69624829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69634284_69634416_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636390
ES.5284.72	chr11	-	4188	18	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-1096	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	99.8737611492126	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGTCTGTATGTGTA	NA	False	NA	-10	True	AATAAA	-15	NA	69634493	69624829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626140_69626202_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416
ES.5284.74	chr11	-	1030	2	ISM	ENSMUSG00000005198.16	ENSMUST00000071213.4	5799	28	-408	13175	6	-5960	5prime_fragment	FALSE	canonical	3	283	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	69649457	69638410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69638940_69648956
ES.5284.8	chr11	-	7364	27	NNC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_15	102.577615295752	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649457	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69626393_69626475_69626626_69626726_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69634284_69634416_69634512_69634630_69634798_69634876_69635087_69635422_69635634_69635745_69636035_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ES.5284.9	chr11	-	6242	24	NIC	ENSMUSG00000005198.16	novel	6740	29	NA	NA	-4517	0	intron_retention	FALSE	canonical	3	248	junction_21	51.0994804260373	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69637914	69624822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523
ES.5285.1	chr11	-	1982	1	Intergenic	novelGene_4160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	9798	False	NA	NA	False	NA	NA	NA	69661516	69659534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69659500_69661500
ES.5286.2	chr11	-	2176	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	-32	11	-32	-11	multi-exon	TRUE	canonical	2	3	junction_10	6.56429737291052	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTAATCATTTTTG	9279	False	NA	-13	True	ATTAAA	-13	NA	69686801	69674872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
ES.5286.3	chr11	-	3128	8	NNC	ENSMUSG00000041189.10	novel	2155	11	NA	NA	-11	-11	intron_retention	FALSE	canonical	0	0	junction_2	9.14732033918978	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGATTAATCATTTTTG	9338	False	NA	-13	True	ATTAAA	-13	NA	69686742	69674872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69675588_69675875_69675959_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69685840_69686420_69686500_69686647
ES.5287.1	chr11	-	4110	5	FSM	ENSMUSG00000042826.14	ENSMUST00000102585.2	3039	5	-1071	0	-1071	0	multi-exon	FALSE	canonical	2	8	junction_2	2.59807621135332	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGTGTTATCTGACATT	2326	False	NA	-4	True	ATTAAA	-15	NA	69693754	69686898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69692258
ES.5287.2	chr11	-	4045	5	NIC	ENSMUSG00000042826.14	novel	3039	5	NA	NA	-1090	0	intron_retention	FALSE	canonical	2	7	junction_2	2.8613807855649	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAGTGTTATCTGACATT	2307	False	NA	-4	True	ATTAAA	-15	NA	69693773	69686898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69692258
ES.5287.3	chr11	-	3173	6	NNC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	-1088	-1	intron_retention	FALSE	canonical	0	0	junction_5	4.83321838943783	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGGAGTGTTATCTGACAT	2309	False	NA	-5	True	ATTAAA	-14	NA	69693771	69686899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69692258_69692856_69693724
ES.5287.5	chr11	-	2715	5	NNC	ENSMUSG00000042826.14	novel	2534	6	NA	NA	1199	-2	intron_retention	FALSE	canonical	1	1	junction_4	5.02493781056044	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	4737	False	NA	-6	True	ATTAAA	-13	NA	69691343	69686900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69691156
ES.5287.6	chr11	-	2663	5	NNC	ENSMUSG00000042826.14	novel	3039	5	NA	NA	1778	-4	intron_retention	FALSE	canonical	1	1	junction_4	4.86698058348295	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCGGAGTGTTATCTGA	5316	False	NA	-8	True	ATTAAA	-11	NA	69690764	69686902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69689099_69689367_69689589_69690177_69690282_69690491_69690603_69690733
ES.5288.1	chr11	-	2044	1	Genic_Genomic	ENSMUSG00000089876.4	novel	NA	NA	NA	NA	-16	6	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAAGTGTTTCCTTTG	NA	False	NA	0	True	ATTAAA	-18	NA	69696466	69694422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_69694400_69696500
ES.5288.2	chr11	-	1982	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	-43	-6	-43	6	multi-exon	FALSE	canonical	3	73	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAAGTGTTTCCTTTG	NA	False	NA	0	True	ATTAAA	-18	NA	69696493	69694422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69695757_69695845
ES.5288.3	chr11	-	1839	3	NNC	ENSMUSG00000089876.4	novel	1933	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAATGGAAAGTGTTT	NA	False	NA	-6	True	ATTAAA	-12	NA	69696455	69694428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69695757_69695845_69696278_69696376
ES.5289.1	chr11	-	4943	5	NIC	ENSMUSG00000051790.16	novel	5003	7	NA	NA	83	0	intron_retention	FALSE	canonical	1	1	junction_4	6.25999201277446	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTCTCCTGTCGT	9979	False	NA	-2	True	TATAAA	-14	NA	69725002	69713947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69724807
ES.5289.2	chr11	-	4304	6	NIC	ENSMUSG00000051790.16	novel	5003	7	NA	NA	57	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	5.6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTGTCTCCTGTCG	9992	False	NA	-3	True	TATAAA	-13	NA	69725028	69713948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69724807
ES.5289.3	chr11	-	4598	7	FSM	ENSMUSG00000051790.16	ENSMUST00000056484.10	5003	7	404	1	-186	-1	multi-exon	FALSE	canonical	3	12	junction_1	3.14907393794853	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTGTCTCCTGTCG	9984	False	NA	-3	True	TATAAA	-13	NA	69725271	69713948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807
ES.5289.4	chr11	-	5595	7	NIC	ENSMUSG00000051790.16	novel	5568	8	NA	NA	636	-1	intron_retention	FALSE	canonical	0	0	junction_6	6.92218655243173	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTGTTGTCTCCTGTCG	7590	False	NA	-3	True	TATAAA	-13	NA	69727974	69713948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807_69725504_69727873
ES.5289.5	chr11	-	2797	8	NNC	ENSMUSG00000051790.16	novel	5568	8	NA	NA	616	-1592	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	5.85191404236116	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCGTCTTCTCCTCC	7570	False	NA	NA	False	NA	NA	NA	69727994	69715539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807_69724941_69727873
ES.529.1	chr1	+	1456	2	Antisense	novelGene_ENSMUSG00000038174.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58619625	58621136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_58619980_58620034
ES.529.2	chr1	+	1537	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGGAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	58619625	58621162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58619600_58621200
ES.5290.1	chr11	-	4167	8	NNC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	103	2418	intron_retention	FALSE	canonical	0	0	junction_7	8.94198991687361	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGATTGCTTGGTTGAT	NA	False	NA	NA	False	NA	NA	NA	69746325	69739412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746308
ES.5290.10	chr11	-	3932	13	NNC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	-43	49	intron_retention	TRUE	canonical	1	1	junction_4	7.4442371447091	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAACTTTTTGGACTC	9037	False	NA	NA	False	NA	NA	NA	69749599	69741995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743713_69743942_69744108_69744406_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
ES.5290.12	chr11	-	1417	9	NNC	ENSMUSG00000001583.14	novel	1798	8	NA	NA	-51	-188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.55624702097168	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAAAGAAAAGAG	9029	False	NA	NA	False	NA	NA	NA	69749607	69745493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69745722_69745965_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
ES.5290.2	chr11	-	3010	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-233	1	-233	-1	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGACACAGCCTCCTT	8847	False	NA	-7	True	AAAAAG	-26	NA	69749789	69741831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
ES.5290.3	chr11	-	3313	5	ISM	ENSMUSG00000001583.14	ENSMUST00000108628.8	2450	12	1892	-212	369	-2	intron_retention	FALSE	canonical	3	13	junction_4	6.97764286847643	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAGACACAGCCTCCT	NA	False	NA	-8	True	AAAAAG	-25	NA	69746059	69741832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942
ES.5290.4	chr11	-	1823	7	NNC	ENSMUSG00000001583.14	novel	2778	14	NA	NA	231	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	11.4515889242013	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAGACACAGCCTCCT	NA	False	NA	-8	True	AAAAAG	-25	NA	69746197	69741832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69742542_69742623_69742720_69742800_69743069_69743638_69743719_69743942_69744108_69744410_69744502_69745783
ES.5290.6	chr11	-	2713	14	FSM	ENSMUSG00000001583.14	ENSMUST00000001626.10	2778	14	-42	107	-42	-107	multi-exon	FALSE	canonical	3	9	junction_11	5.7316726185222	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTGGCTGACGCCGCT	9038	False	NA	-113	True	NA	NA	NA	69749598	69741937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744108_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737_69747952_69749230_69749336_69749532
ES.5290.7	chr11	-	3432	5	ISM	ENSMUSG00000001583.14	ENSMUST00000108628.8	2450	12	1629	-68	106	68	intron_retention	FALSE	canonical	3	13	junction_4	6.97764286847643	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGACTTTTTTCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	69746322	69741976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942
ES.5290.9	chr11	-	1625	8	NNC	ENSMUSG00000001583.14	novel	2450	12	NA	NA	91	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.6099683586441	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGACTTTTTTCCTTTA	NA	False	NA	NA	False	NA	NA	NA	69746337	69741977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744123_69744406_69744502_69745783_69746058_69746312
ES.5291.1	chr11	-	167	1	Intergenic	novelGene_4164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCTTTAAAAATAAAAA	1038	False	NA	NA	False	NA	NA	NA	69760929	69760762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69760800_69760900
ES.5292.1	chr11	-	208	1	Intergenic	novelGene_4165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTATAATATGTACTTTT	NA	False	NA	NA	False	AATAAA	-2	NA	69765014	69764806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69764800_69765000
ES.5293.1	chr11	-	2714	1	FSM	ENSMUSG00000046731.6	ENSMUST00000238978.2	2721	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACGTGTAAAGGCCACTA	NA	False	NA	NA	False	AATAAA	-15	NA	69771804	69769090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69769100_69771800
ES.5293.11	chr11	-	2468	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	14	0	14	0	multi-exon	FALSE	canonical	3	20	junction_20	9.40183800238705	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9587	False	NA	-6	True	ATTAAA	-15	NA	69786351	69772392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.12	chr11	-	2568	21	NNC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	57	0	intron_retention	FALSE	canonical	0	0	junction_7	13.2442440327865	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9630	False	NA	-6	True	ATTAAA	-15	NA	69786308	69772392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776331_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.13	chr11	-	3378	17	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	-834	-1	intron_retention	FALSE	canonical	3	35	junction_15	5.94473243720859	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTAGTTCATTT	NA	False	NA	-7	True	ATTAAA	-14	NA	69782151	69772393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780337_69780443_69780540_69780645_69780691_69780824_69781319_69781414_69781469_69781689
ES.5293.14	chr11	-	3258	20	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	1	-1	intron_retention	FALSE	canonical	3	20	junction_18	9.32663656333233	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTAGTTCATTT	9574	False	NA	-7	True	ATTAAA	-14	NA	69786364	69772393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.15	chr11	-	3847	16	NNC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	56	-1	intron_retention	FALSE	canonical	0	0	junction_11	14.8317976733174	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTCTTAGTTCATTT	9629	False	NA	-7	True	ATTAAA	-14	NA	69786309	69772393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780498_69780645_69780691_69780824_69781319_69781414_69781810_69785425_69785484_69786111
ES.5293.2	chr11	-	5214	22	FSM	ENSMUSG00000046731.6_ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	-1	-2731	-1	-571	multi-exon	TRUE	canonical	3	20	junction_20	9.40183800238705	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCTGTCTTGGTTCCC	9572	False	NA	NA	False	AATAGA	-17	NA	69786366	69769661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.3	chr11	-	3139	17	NNC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	-549	4	intron_retention	FALSE	canonical	1	1	junction_13	12.6687052909917	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTTCATTTACTGT	NA	False	NA	-2	True	ATTAAA	-19	NA	69781866	69772388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780563_69780645_69780691_69780824_69781319_69781414_69781469_69781689
ES.5293.4	chr11	-	2736	21	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	3	1	intron_retention	FALSE	canonical	3	20	junction_19	9.48828224706664	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	9576	False	NA	-5	True	ATTAAA	-16	NA	69786362	69772391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.5	chr11	-	2733	21	NIC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	1	1	intron_retention	FALSE	canonical	3	20	junction_19	9.10714005602198	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTAGTTCATTTAC	9574	False	NA	-5	True	ATTAAA	-16	NA	69786364	69772391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5293.6	chr11	-	2977	21	NNC	ENSMUSG00000001588.13	novel	2482	22	NA	NA	55	0	intron_retention	FALSE	canonical	1	1	junction_14	13.1852189970436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9628	False	NA	-6	True	ATTAAA	-15	NA	69786310	69772392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780563_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ES.5294.1	chr11	-	171	1	Intergenic	novelGene_4166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAGAAAGAAGGA	9897	False	NA	NA	False	NA	NA	NA	69787272	69787101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69787100_69787300
ES.5295.1	chr11	-	1288	8	NNC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	-78	19773	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9568.98359603696	5109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGCCAACAACAACAA	6389	False	NA	NA	False	NA	NA	NA	69812094	69787766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69787799_69803299_69803331_69807545_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.11	chr11	-	1439	5	NIC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	20384	junction_2	341.457446104196	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	9937	False	NA	-9	True	AATAAA	-26	NA	69812216	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.13	chr11	-	1369	6	NNC	ENSMUSG00000078812.11	novel	1281	7	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8485.60234750604	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	9937	False	NA	-9	True	AATAAA	-26	NA	69812216	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811972
ES.5295.14	chr11	-	1227	6	NNC	ENSMUSG00000078812.11	novel	1281	7	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	8479.21374656872	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	6374	False	NA	-9	True	AATAAA	-26	NA	69812109	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69812007
ES.5295.15	chr11	-	3404	3	NIC	ENSMUSG00000078812.11	novel	1281	7	NA	NA	45	0	intron_retention	FALSE	canonical	3	21069	junction_2	106.5	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	9986	False	NA	-9	True	AATAAA	-26	NA	69812167	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808328_69808422_69808848_69809976
ES.5295.18	chr11	-	1354	6	NNC	ENSMUSG00000078812.11	novel	1409	6	NA	NA	-281	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	8473.22444881522	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCAGTTGTTTATTTGT	9660	False	NA	-10	True	AATAAA	-25	NA	69812493	69807540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69812263
ES.5295.2	chr11	-	1465	8	FSM	ENSMUSG00000018570.18	ENSMUST00000018714.13	1485	8	24	-4	-20	-1	multi-exon	FALSE	canonical	2	12	junction_7	3.28260722659316	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGAGCTGCGTGTC	9769	False	NA	-9	True	AATAAA	-19	NA	69791740	69788184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ES.5295.21	chr11	-	1327	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8488.43133682543	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCAGTTGTTTATTT	9951	False	NA	-12	True	AATAAA	-23	NA	69812202	69807542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808839_69809976_69810163_69811988
ES.5295.22	chr11	-	4452	2	ISM	ENSMUSG00000078812.11	ENSMUST00000152589.2	669	6	-346	-738	-75	1	intron_retention	FALSE	canonical	3	21282	junction_1	0	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAACTCAGTTGTTTAT	6392	False	NA	-14	True	AATAAA	-21	NA	69812091	69807544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69808328_69808422
ES.5295.23	chr11	-	3152	4	ISM	ENSMUSG00000078812.11	ENSMUST00000152589.2	669	6	-364	-737	-93	0	intron_retention	FALSE	canonical	3	20384	junction_2	383.115590332155	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6374	False	NA	-15	True	AATAAA	-20	NA	69812109	69807545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69808328_69808422_69808555_69808742_69808848_69809976
ES.5295.24	chr11	-	2844	2	NIC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	21098	junction_1	0	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAACTCAGTTGTTT	9937	False	NA	-16	True	AATAAA	-19	NA	69812216	69807546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69810163_69811988
ES.5295.26	chr11	-	612	3	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10549	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6339	False	NA	-17	True	AATAAA	-18	NA	69812144	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69807937_69810095_69810163_69811988
ES.5295.27	chr11	-	2332	7	NIC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	-5	-2	combination_of_known_junctions	FALSE	canonical	3	627	junction_6	9532.14936849677	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9936	False	NA	-17	True	AATAAA	-18	NA	69812217	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69811261_69811988
ES.5295.29	chr11	-	1381	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	8465.07898132085	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9937	False	NA	-17	True	AATAAA	-18	NA	69812216	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808364_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.3	chr11	-	1807	8	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-9	-1	intron_retention	FALSE	canonical	0	0	junction_1	7.06529315364471	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGAGCTGCGTGTC	9780	False	NA	-9	True	AATAAA	-19	NA	69791729	69788184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69788319_69788444_69788581_69788928_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790753_69791128
ES.5295.30	chr11	-	1230	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108609.8	849	6	-72	-309	-51	-2	multi-exon	FALSE	canonical	3	1864	junction_5	7741.45703081791	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6521	False	NA	-17	True	AATAAA	-18	NA	69811962	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811849
ES.5295.31	chr11	-	1214	7	NNC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	-59073	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	7899.66008586586	5253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9121	False	NA	-17	True	AATAAA	-18	NA	69871857	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988_69812063_69871834
ES.5295.32	chr11	-	1519	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108611.8	1353	7	-168	2	-23	-2	multi-exon	FALSE	canonical	3	18	junction_6	9790.70116658319	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6549	False	NA	-17	True	AATAAA	-18	NA	69811934	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811626
ES.5295.35	chr11	-	1352	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8388.86127194865	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9936	False	NA	-17	True	AATAAA	-18	NA	69812217	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808247_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.37	chr11	-	1301	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108607.8	852	7	-74	-375	-74	-2	multi-exon	FALSE	canonical	3	47	junction_6	9783.67234080446	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6393	False	NA	-17	True	AATAAA	-18	NA	69812090	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811249_69811988
ES.5295.38	chr11	-	1432	7	FSM	ENSMUSG00000078812.11	ENSMUST00000070996.11	1373	7	-61	2	-61	-2	multi-exon	FALSE	canonical	3	81	junction_6	9665.3113547021	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9880	False	NA	-17	True	AATAAA	-18	NA	69812273	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811988
ES.5295.39	chr11	-	1437	5	NIC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	20384	junction_2	562.774544111583	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9940	False	NA	-17	True	AATAAA	-18	NA	69812213	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808168_69808253_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.4	chr11	-	1712	9	NIC	ENSMUSG00000018570.18	novel	1640	9	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.70087712549569	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGGAGCTGCGTGTC	9666	False	NA	-9	True	AATAAA	-19	NA	69791843	69788184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69788319_69788436_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ES.5295.41	chr11	-	1477	4	NIC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	45	-2	intron_retention	FALSE	canonical	3	20384	junction_1	329.959930227226	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9986	False	NA	-17	True	AATAAA	-18	NA	69812167	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.42	chr11	-	1240	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-77	-2	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	8474.42230715463	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6390	False	NA	-17	True	AATAAA	-18	NA	69812093	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810181_69811988
ES.5295.43	chr11	-	3064	5	ISM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	103	2	-93	-2	intron_retention	FALSE	canonical	3	20384	junction_3	565.770437103248	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6374	False	NA	-17	True	AATAAA	-18	NA	69812109	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976
ES.5295.44	chr11	-	4026	1	NIC	ENSMUSG00000078812.11	novel	1281	7	NA	NA	-117	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5082	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6910	False	NA	-17	True	AATAAA	-18	NA	69811573	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69807500_69811600
ES.5295.48	chr11	-	4431	3	ISM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	53	2	53	-2	intron_retention	FALSE	canonical	3	21282	junction_2	344	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9994	False	NA	-17	True	AATAAA	-18	NA	69812159	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69808168_69808253_69808328_69808422
ES.5295.49	chr11	-	1471	8	NIC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	10166.7414039854	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	9935	False	NA	-17	True	AATAAA	-18	NA	69812218	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811166_69811261_69811988
ES.5295.5	chr11	-	159	1	Intergenic	novelGene_4167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	9722	False	NA	NA	False	NA	NA	NA	69795923	69795764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69795800_69795900
ES.5295.50	chr11	-	1361	8	NIC	ENSMUSG00000078812.11	novel	1353	7	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	10269.0743040074	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCCAACTCAGTTGTT	6737	False	NA	-17	True	AATAAA	-18	NA	69811746	69807547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811166_69811261_69811626
ES.5295.53	chr11	-	1168	7	NNC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	46	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7899.66008586586	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCCCAACTCAGTTGT	9987	False	NA	-18	True	AATAAA	-17	NA	69812166	69807548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69807887_69808012_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.54	chr11	-	1174	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8467.07544315037	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCCCAACTCAGTTGT	6423	False	NA	-18	True	AATAAA	-17	NA	69812060	69807548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808339_69808447_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.55	chr11	-	1316	7	NNC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	-87	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10479.812902539	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	6380	False	NA	-19	True	AATAAA	-16	NA	69812103	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808547_69808742_69808848_69809976_69810163_69811166_69811261_69811988
ES.5295.56	chr11	-	1331	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8488.43133682543	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	9937	False	NA	-19	True	AATAAA	-16	NA	69812216	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809988_69810163_69811988
ES.5295.57	chr11	-	1152	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-76	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8388.86127194865	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	6391	False	NA	-19	True	AATAAA	-16	NA	69812092	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808101_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.58	chr11	-	1336	6	NNC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	8467.07544315037	5085	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	9937	False	NA	-19	True	AATAAA	-16	NA	69812216	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69808168_69808253_69808328_69808429_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.59	chr11	-	1305	7	NIC	ENSMUSG00000078812.11	novel	1281	7	NA	NA	-52	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	9794.82471200424	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	6520	False	NA	-19	True	AATAAA	-16	NA	69811963	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811867
ES.5295.6	chr11	-	1380	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	90	-127	90	121	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGGGTACATTTTGTAC	6361	False	NA	NA	False	AATAAA	-16	NA	69812122	69807418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ES.5295.60	chr11	-	3910	4	ISM	ENSMUSG00000078812.11	ENSMUST00000108612.8	1259	6	-62	4	62	-4	intron_retention	FALSE	canonical	3	20384	junction_3	649.370977690462	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	6655	False	NA	-19	True	AATAAA	-16	NA	69811828	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742
ES.5295.61	chr11	-	3228	3	NIC	ENSMUSG00000078812.11	novel	1409	6	NA	NA	-78	-4	intron_retention	FALSE	canonical	3	20384	junction_1	342.5	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCCCCAACTCAGTTG	6389	False	NA	-19	True	AATAAA	-16	NA	69812094	69807549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69808555_69808742_69808848_69809976
ES.5295.63	chr11	-	2599	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	-72	-3	-33	-1	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCCTGTGCTGGAGGA	NA	False	NA	5	True	ATTAAA	-43	NA	69839047	69833365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
ES.5295.64	chr11	-	3057	10	FSM	ENSMUSG00000018566.15	ENSMUST00000141837.9	1776	10	-32	-1249	-8	0	multi-exon	FALSE	canonical	3	12	junction_1	3.19722101554181	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGTCCTGTGCTGGA	NA	False	NA	2	True	ATTAAA	-40	NA	69839022	69833368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
ES.5295.65	chr11	-	1869	9	NNC	ENSMUSG00000018566.15	novel	1776	10	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_4	6.85109480302236	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGCTATAAGTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	69839054	69834617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69835089_69835612_69835933_69836094_69836283_69836388_69836468_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
ES.5295.66	chr11	-	3258	8	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	134	0	intron_retention	TRUE	non_canonical	0	0	junction_3	251.940469158887	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9590	False	NA	0	True	AATAAA	-30	NA	69871388	69859049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69859367_69859921_69860023_69860318_69861873_69862124_69862250_69865416_69866087_69870655_69870737_69870824_69870886_69871039
ES.5295.67	chr11	-	1007	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	197.076127422882	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9891	False	NA	-4	True	AATAAA	-26	NA	69871087	69859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69859367_69859921_69860023_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ES.5295.68	chr11	-	1232	9	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	187.68990383076	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	8531	False	NA	-4	True	AATAAA	-26	NA	69872447	69859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871157_69872387
ES.5295.69	chr11	-	1321	9	NNC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	206	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	188.652085530481	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9106	False	NA	-4	True	AATAAA	-26	NA	69871872	69859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871157_69871723
ES.5295.70	chr11	-	936	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	199.363710060003	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9876	False	NA	-4	True	AATAAA	-26	NA	69871102	69859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ES.5295.74	chr11	-	1349	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	201.455330036214	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9891	False	NA	-4	True	AATAAA	-26	NA	69871087	69859053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69859367_69859921_69860023_69860160_69860415_69861386_69861569_69865865_69866087_69870655_69870886_69871039
ES.5295.77	chr11	-	4332	4	ISM	ENSMUSG00000018565.18	ENSMUST00000108595.9	803	6	1380	387	2	-387	internal_fragment	FALSE	canonical	3	471	junction_3	38.0525951808809	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	9893	False	NA	NA	False	NA	NA	NA	69871085	69861942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_69866087_69870655_69870737_69870824_69870886_69871039
ES.5295.8	chr11	-	1461	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108612.8	1259	6	-196	-6	-51	0	multi-exon	FALSE	canonical	3	1359	junction_5	7943.03597876782	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	6521	False	NA	-9	True	AATAAA	-26	NA	69811962	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811626
ES.5295.9	chr11	-	1492	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	-49	-6	-49	0	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	5085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	9892	False	NA	-9	True	AATAAA	-26	NA	69812261	69807539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
ES.5296.1	chr11	-	178	1	Intergenic	novelGene_4171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	3972	False	NA	NA	False	NA	NA	NA	69877006	69876828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_69876800_69877000
ES.5297.1	chr11	-	2184	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	-20	4	-17	2	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCCGTGAATGTCACT	NA	False	NA	0	True	AATAAA	-17	NA	69906254	69901012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ES.5297.10	chr11	-	4648	5	NIC	ENSMUSG00000018574.15	novel	2168	20	NA	NA	4	-5	intron_retention	FALSE	canonical	3	151	junction_3	17.5071414000116	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTCTGCCGTGAA	NA	False	NA	-7	True	AATAAA	-10	NA	69906209	69901019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901263_69901350_69901427_69901523_69905206_69905304_69905685_69905942
ES.5297.3	chr11	-	2133	20	NNC	ENSMUSG00000018574.15	novel	2168	20	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	42.1118415913632	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCGTGAATGT	NA	False	NA	-4	True	AATAAA	-13	NA	69906237	69901016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904098_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ES.5297.4	chr11	-	2266	19	NIC	ENSMUSG00000018574.15	novel	2168	20	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	125	junction_9	17.3877351409933	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCGTGAATGT	NA	False	NA	-4	True	AATAAA	-13	NA	69906252	69901016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ES.5297.5	chr11	-	2213	19	NIC	ENSMUSG00000018574.15	novel	2168	20	NA	NA	4	-2	intron_retention	FALSE	canonical	3	125	junction_9	17.3877351409933	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCGTGAATGT	NA	False	NA	-4	True	AATAAA	-13	NA	69906209	69901016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901263_69901350_69901427_69901523_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ES.5297.6	chr11	-	3073	14	NIC	ENSMUSG00000018574.15	novel	2168	20	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	151	junction_9	12.8519102717509	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCGTGAATGT	NA	False	NA	-4	True	AATAAA	-13	NA	69906245	69901016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901263_69901350_69901427_69901523_69902273_69902361_69902425_69902509_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ES.5297.7	chr11	-	4521	8	NIC	ENSMUSG00000018574.15	novel	2020	19	NA	NA	1	-2	intron_retention	FALSE	canonical	3	125	junction_5	22.6697676950369	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTGCCGTGAATGT	NA	False	NA	-4	True	AATAAA	-13	NA	69906236	69901016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901427_69901523_69901748_69901831_69901905_69901993_69902425_69902509_69903117_69903273_69903910_69903997_69905206_69905304
ES.5297.9	chr11	-	3634	12	NIC	ENSMUSG00000018574.15	novel	2020	19	NA	NA	-13	-5	intron_retention	FALSE	canonical	3	125	junction_8	20.6849647955959	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTCTGCCGTGAA	NA	False	NA	-7	True	AATAAA	-10	NA	69906250	69901019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_69901263_69901350_69901427_69901523_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69905206_69905304
ES.5298.1	chr11	-	211	1	Antisense	novelGene_ENSMUSG00000020886.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTACAAAAGAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	69925181	69924970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69925000_69925200
ES.5299.1	chr11	-	341	1	Antisense	novelGene_ENSMUSG00000020886.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAACAACAACAAAA	8591	False	NA	NA	False	NA	NA	NA	69927665	69927324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_69927300_69927700
ES.53.1	chr1	-	157	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATATCAAAAAAAAAAAAGAA	NA	False	NA	NA	False	AATAAA	-18	NA	8862047	8861890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_8861900_8862000
ES.530.1	chr1	-	1787	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	18	-9	18	9	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTGTACGGTCTT	NA	False	NA	-3	True	AATAAA	-29	NA	58463207	58451149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
ES.530.10	chr1	-	1995	16	Fusion	ENSMUSG00000026034.18_ENSMUSG00000026035.16	novel	1796	13	NA	NA	-69	-2	multi-exon	FALSE	canonical	2	3	junction_11	72.6790815082916	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58484404	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58473489_58473609_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.11	chr1	-	2057	7	NNC	ENSMUSG00000026034.18	novel	2102	7	NA	NA	487	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	80.0867585115598	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58455437	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58454810_58455164
ES.530.12	chr1	-	5429	9	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	38	-2	intron_retention	FALSE	canonical	3	126	junction_8	38.9101529166874	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58463187	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.13	chr1	-	4103	10	NIC	ENSMUSG00000026034.18	novel	1538	11	NA	NA	15	-2	intron_retention	FALSE	canonical	3	65	junction_7	52.2749143152494	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58463210	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ES.530.14	chr1	-	2841	10	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	44	-2	intron_retention	FALSE	canonical	3	9	junction_6	65.9788593152626	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58463181	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.15	chr1	-	5414	9	NNC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	44	-2	intron_retention	FALSE	canonical	0	0	junction_3	71.8905417979306	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAGGTCTATAGCTTGG	NA	False	NA	-14	True	AATAAA	-18	NA	58463181	58451160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452557_58452632_58453530_58453661_58453748_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.16	chr1	-	3986	11	NIC	ENSMUSG00000026034.18	novel	1705	12	NA	NA	44	-3	intron_retention	FALSE	canonical	3	65	junction_8	49.6954726308142	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAAGGTCTATAGCTTG	NA	False	NA	-15	True	AATAAA	-17	NA	58463181	58451161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ES.530.17	chr1	-	5151	9	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	16	-3	intron_retention	FALSE	canonical	3	9	junction_6	69.8569967862919	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAAGGTCTATAGCTTG	NA	False	NA	-15	True	AATAAA	-17	NA	58463209	58451161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58460468_58460932_58461094_58463078
ES.530.18	chr1	-	7639	9	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	8	-18	intron_retention	FALSE	canonical	3	126	junction_8	37.2323783822629	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGCTTATGAATGTATA	NA	False	NA	-30	True	AATAAA	-2	NA	58463217	58451176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58456339_58456425_58460468_58460932_58461094_58463078
ES.530.19	chr1	-	1029	8	NNC	ENSMUSG00000026035.16	novel	1363	7	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	97.6428310168217	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484318	58470153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58470490_58473489_58473609_58477123_58477278_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484186
ES.530.2	chr1	-	4655	10	NNC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	8	1	intron_retention	FALSE	non_canonical	0	0	junction_6	68.3478755980421	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTATAGCTTGGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	58463217	58451157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58454817_58455623_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.20	chr1	-	1051	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	-19	1	-14	-1	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484612	58470153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.21	chr1	-	860	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	38	-2	-9	-1	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484607	58470153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ES.530.22	chr1	-	798	6	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	88.2849930622413	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484613	58470153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58470490_58473489_58473609_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ES.530.23	chr1	-	847	7	NNC	ENSMUSG00000026035.16	novel	896	7	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	66.6149799636355	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGTGTCCTTTTTTTT	NA	False	NA	0	True	AATAGA	-27	NA	58484629	58470153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484525
ES.530.24	chr1	-	1210	8	NNC	ENSMUSG00000026035.16	novel	1033	7	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.7553444804317	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACATGTGAGTGTCCTT	NA	False	NA	-6	True	AATAGA	-21	NA	58484623	58470159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58470490_58473489_58473609_58477123_58477278_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.25	chr1	-	1083	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	273	7	20	-4	multi-exon	FALSE	canonical	3	14	junction_6	68.4505092911822	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACATGTGAGTGTCCTT	NA	False	NA	-6	True	AATAGA	-21	NA	58484315	58470159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
ES.530.26	chr1	-	883	7	NNC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	73.5974410787042	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGTGAGTGTCCT	NA	False	NA	-7	True	AATAGA	-20	NA	58484645	58470160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483823_58484522
ES.530.27	chr1	-	1130	7	NNC	ENSMUSG00000026035.16	novel	1033	7	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	87.5569655836829	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGTGAGTGTCCT	NA	False	NA	-7	True	AATAGA	-20	NA	58484612	58470160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58470490_58473489_58473609_58477123_58477278_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.28	chr1	-	721	6	NIC	ENSMUSG00000026035.16	novel	1033	7	NA	NA	-22	-5	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	75.6370279691105	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGTGAGTGTCCT	NA	False	NA	-7	True	AATAGA	-20	NA	58484357	58470160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58470490_58473489_58473609_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.29	chr1	-	805	7	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	4	-5	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	60.3869467131212	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACATGTGAGTGTCCT	NA	False	NA	-7	True	AATAGA	-20	NA	58484637	58470160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
ES.530.3	chr1	-	3045	11	FSM	ENSMUSG00000026034.18	ENSMUST00000156931.8	4865	11	8	1812	8	-1	multi-exon	FALSE	canonical	3	126	junction_10	34.9097407609968	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463217	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.30	chr1	-	677	6	FSM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	-43	541	17	87	multi-exon	FALSE	canonical	3	104	junction_5	38.958439393795	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTCATCTCTTTCTT	NA	False	NA	0	True	AATATA	-17	NA	58484571	58473486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ES.530.31	chr1	-	584	6	NNC	ENSMUSG00000026035.16	novel	1175	6	NA	NA	-15	87	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	95.2499868766395	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTCATCTCTTTCTT	NA	False	NA	0	True	AATATA	-17	NA	58484613	58473486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58473609_58477123_58477278_58480001_58480096_58481683_58481759_58483747_58483799_58484525
ES.530.32	chr1	-	208	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACACAGAAATAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	58474085	58473877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58473900_58474100
ES.530.4	chr1	-	1706	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	-2	1	-2	-1	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463227	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ES.530.5	chr1	-	4480	8	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	44	-1	intron_retention	FALSE	canonical	3	126	junction_7	33.8049628043588	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463181	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
ES.530.6	chr1	-	1327	3	FSM	ENSMUSG00000026034.18	ENSMUST00000141570.8	923	3	-405	1	-17	-1	multi-exon	FALSE	canonical	3	208	junction_2	2	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58453001	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58451500_58451805_58451897_58452105
ES.530.7	chr1	-	1543	11	FSM	ENSMUSG00000026034.18	ENSMUST00000151338.8	1538	11	-6	1	-6	-1	multi-exon	FALSE	canonical	3	9	junction_6	69.2961759406679	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463231	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ES.530.8	chr1	-	7718	8	NIC	ENSMUSG00000026034.18	novel	4865	11	NA	NA	33	-1	intron_retention	FALSE	canonical	3	126	junction_7	39.7291852831808	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463192	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58460468_58460932_58461094_58463078
ES.530.9	chr1	-	1947	13	NNC	ENSMUSG00000026034.18	novel	1796	13	NA	NA	142	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	73.9248868033552	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGTCTATAGCTTGGT	NA	False	NA	-13	True	AATAAA	-19	NA	58463083	58451159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58462784
ES.5300.1	chr11	+	1368	8	NNC	ENSMUSG00000040963.16	novel	672	5	NA	NA	-1796	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	15.9885162870488	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCGTGTAGCCTGGTTG	5194	False	NA	NA	False	TATAAA	-45	NA	69986721	69997010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_69987005_69987627_69987745_69988004_69988101_69988645_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
ES.5301.1	chr11	+	1209	3	ISM	ENSMUSG00000040950.14	ENSMUST00000108584.2	1307	8	1981	-247	1981	-6	3prime_fragment	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTGTCTTAGCT	145	False	NA	NA	False	NA	NA	NA	70026979	70028368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70027164_70027266_70027419_70027495
ES.5301.2	chr11	+	995	5	NNC	ENSMUSG00000040950.14	novel	1307	8	NA	NA	1981	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAATTTGTCTTAGCT	145	False	NA	NA	False	NA	NA	NA	70026979	70028368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70027164_70027266_70027419_70027495_70027603_70027755_70028061_70028121
ES.5302.1	chr11	+	2118	3	NIC	ENSMUSG00000040938.17	novel	1754	5	NA	NA	-6	0	intron_retention	FALSE	canonical	2	2	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTTGAGAGTTCCATT	NA	False	NA	NA	False	AATAAA	-14	NA	70104934	70107238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70105091_70105191_70106878_70106962
ES.5302.2	chr11	+	2291	1	NIC	ENSMUSG00000040938.17	novel	1938	7	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCTTGAGAGTTCCATT	NA	False	NA	NA	False	AATAAA	-14	NA	70104947	70107238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70104900_70107200
ES.5303.1	chr11	-	2553	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	-23	1	-23	-1	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGATGGTCAAGCTCA	NA	False	NA	NA	False	NA	NA	NA	70111843	70107615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
ES.5303.3	chr11	-	3244	3	NIC	ENSMUSG00000044367.8	novel	2531	4	NA	NA	27	-1	intron_retention	FALSE	canonical	3	11	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGATGGTCAAGCTCA	NA	False	NA	NA	False	NA	NA	NA	70111863	70107615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70110157_70111020_70111165_70111304
ES.5303.4	chr11	-	1526	4	NIC	ENSMUSG00000044367.8	novel	2531	4	NA	NA	225	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.18241233033047	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTAGGTCTGATGGTCA	NA	False	NA	NA	False	NA	NA	NA	70111385	70107621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70108748_70109418_70109594_70111020_70111165_70111304
ES.5304.1	chr11	-	1913	1	Genic_Genomic	ENSMUSG00000000317.12	novel	NA	NA	NA	NA	3640	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCCTAGGATTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	70116863	70114950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_70115000_70116900
ES.5305.1	chr11	-	685	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	-14	-4	-4	4	multi-exon	FALSE	canonical	3	142	junction_2	177.768263634304	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCAGCTGCCGTTCC	NA	False	NA	-8	True	ATTAAA	-19	NA	70128744	70126027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
ES.5305.11	chr11	-	1374	4	NIC	ENSMUSG00000020831.19	novel	659	4	NA	NA	3	0	intron_retention	FALSE	canonical	3	60	junction_1	214.356401039639	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128676	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126291_70126849_70127805_70128356_70128452_70128609
ES.5305.12	chr11	-	721	5	NIC	ENSMUSG00000020831.19	novel	576	6	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	180.473509136383	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70128683	70126035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126295_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ES.5305.13	chr11	-	726	5	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	149.269889796971	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70128685	70126035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128609
ES.5305.17	chr11	-	3328	4	NIC	ENSMUSG00000040904.11	novel	1621	8	NA	NA	0	-4	intron_retention	FALSE	canonical	3	565	junction_1	74.0825365536455	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACATGGTGCTGCCAGCT	NA	False	NA	-16	True	ATTAAA	-11	NA	70130629	70126035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70128452_70128609_70129297_70129763_70129841_70130481
ES.5305.18	chr11	-	631	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-22	2	-22	1	multi-exon	FALSE	canonical	3	718	junction_2	4	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGCTGTCTGTGCTTT	NA	False	NA	-3	True	AATAAA	-18	NA	70130690	70128951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70129297_70129763_70129841_70130481
ES.5305.2	chr11	-	781	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	-4	2	-4	0	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128744	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ES.5305.4	chr11	-	697	4	NIC	ENSMUSG00000020831.19	novel	659	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	221.278607692254	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128739	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126291_70126822_70127038_70128356_70128452_70128609
ES.5305.5	chr11	-	1704	8	NIC	ENSMUSG00000040904.11	novel	1621	8	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	193.976013665481	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70130674	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609_70129297_70129763_70129841_70130481
ES.5305.7	chr11	-	765	5	NIC	ENSMUSG00000020831.19	novel	779	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	211.660695453832	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128739	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126295_70126849_70127038_70127713_70127805_70128356_70128452_70128609
ES.5305.8	chr11	-	801	5	NIC	ENSMUSG00000020831.19	novel	779	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	190.587742260619	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128737	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126295_70126822_70127038_70127702_70127805_70128356_70128452_70128609
ES.5305.9	chr11	-	1542	5	NIC	ENSMUSG00000020831.19	novel	880	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	195	junction_1	147.516100816148	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128739	70126033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70126291_70126521_70126627_70126849_70127805_70128356_70128452_70128609
ES.5306.1	chr11	-	1287	7	NNC	ENSMUSG00000000320.11	novel	3001	14	NA	NA	7737	-559	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	10.4628974104797	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCAGCACCTTTAATCT	NA	False	NA	85	True	NA	NA	NA	70138430	70132841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70138343
ES.5306.10	chr11	-	1892	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	6	416	6	-416	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACAATAATAAAAA	7420	False	NA	NA	False	NA	NA	NA	70146161	70140204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.11	chr11	-	1798	9	NNC	ENSMUSG00000000320.11	novel	2314	8	NA	NA	1	-416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42652507555144	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACAATAATAAAAA	7415	False	NA	NA	False	NA	NA	NA	70146166	70140204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70140774_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.12	chr11	-	1596	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	-57	775	-45	-775	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTGGCAGTCTCACA	7357	False	NA	NA	False	NA	NA	NA	70146224	70140563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.2	chr11	-	2415	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	-13	599	-13	-599	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAACAAAGCCAG	7389	False	NA	45	True	NA	NA	NA	70146192	70132881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.3	chr11	-	2307	14	NNC	ENSMUSG00000000320.11	novel	3001	14	NA	NA	4	-644	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	7.56040761557269	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCACATGTCACAGGGT	7418	False	NA	0	True	NA	NA	NA	70146163	70132926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136775_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.4	chr11	-	3437	14	NNC	ENSMUSG00000000320.11	novel	3001	14	NA	NA	1	-644	intron_retention	FALSE	canonical	0	0	junction_12	11.5323060504063	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCACATGTCACAGGGT	7415	False	NA	0	True	NA	NA	NA	70146166	70132926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143979_70144072_70144155_70145234_70145437_70145574_70145737_70145963
ES.5306.6	chr11	-	2176	13	NIC	ENSMUSG00000000320.11	novel	3001	14	NA	NA	45	-646	combination_of_known_splicesites	FALSE	canonical	3	3	junction_3	7.43863786814047	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTCACATGTCACAGG	7459	False	NA	-2	True	NA	NA	NA	70146122	70132928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70133391_70133510_70133682_70133802_70133904_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5306.8	chr11	-	158	1	Intergenic	novelGene_4172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAACAACAAAG	NA	False	NA	NA	False	NA	NA	NA	70137605	70137447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70137400_70137600
ES.5306.9	chr11	-	2215	8	FSM	ENSMUSG00000000320.11	ENSMUST00000108574.3	2314	8	0	99	0	-99	multi-exon	FALSE	canonical	3	24	junction_3	2.55550625999976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGATTTTATTTACTG	7414	False	NA	NA	False	AATACA	-15	NA	70146167	70139887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ES.5307.1	chr11	+	178	1	Intergenic	novelGene_4173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70160192	70160370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70160200_70160400
ES.5308.1	chr11	-	161	1	Intergenic	novelGene_4174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4137	False	NA	NA	False	NA	NA	NA	70181094	70180933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70180900_70181100
ES.5309.1	chr11	+	284	1	Intergenic	novelGene_4175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	70254674	70254958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70254700_70255000
ES.531.1	chr1	-	6767	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	183	-3389	-1	3389	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTGCAATTGCTTGA	NA	False	NA	NA	False	NA	NA	NA	58544085	58498540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.10	chr1	-	3392	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-36	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	135.814671519685	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTAGTTTTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	58544150	58501931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58543930
ES.531.12	chr1	-	3324	14	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	199.082362308288	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCCTTTTGTAGTTTTG	NA	False	NA	-6	True	AATAAA	-17	NA	58544269	58501935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58536534_58536625_58539399_58539544_58540481_58540586_58543930
ES.531.13	chr1	-	3255	16	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-6	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	142.791907644967	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCCTTTTGTAGTTTTG	NA	False	NA	-6	True	AATAAA	-17	NA	58544090	58501935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.14	chr1	-	3193	17	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-460	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	139.047204214972	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGAGTCCTTTTGTAGT	NA	False	NA	-10	True	AATAAA	-13	NA	58541035	58501939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540487_58540586_58541000
ES.531.15	chr1	-	3143	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	-4	422	-4	-422	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544272	58502351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.16	chr1	-	2917	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-28	-422	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	160.539909368356	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544142	58502351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.17	chr1	-	2778	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	30	-422	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	134.785941403397	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544054	58502351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.18	chr1	-	3006	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-27	-422	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGTCTGCACTTTGC	NA	False	NA	3	True	AATAAA	-21	NA	58544141	58502351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.2	chr1	-	6107	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	2928	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.444961020869	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTTTGTTTTTT	NA	False	NA	NA	False	CATAAA	-27	NA	58544085	58499001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58499301_58499499_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.20	chr1	-	3107	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-14	-425	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	187.459592353745	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544128	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58520981_58521099_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.22	chr1	-	3953	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	27	-425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	213.291546833477	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544241	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58520981_58521096_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58540208_58540409_58540586_58541000_58541044_58543930
ES.531.23	chr1	-	6362	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-3	-425	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	134.951458657443	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544087	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58536067_58536284_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.24	chr1	-	2808	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-4	-425	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	158.371793574487	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544118	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.25	chr1	-	2840	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	22	-425	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	134.155096227277	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544062	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.26	chr1	-	2865	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	230	-425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	134.951458657443	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58543854	58502354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543787
ES.531.27	chr1	-	2752	15	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	16	-426	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	146.077698084105	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCTGGTCTGCACT	NA	False	NA	-1	True	AATAAA	-17	NA	58544068	58502355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.28	chr1	-	3014	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-15	-427	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_15	133.884032864473	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCTGGTCTGCAC	NA	False	NA	-2	True	AATAAA	-16	NA	58544129	58502356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539563_58540481_58540586_58541000_58541050_58543930
ES.531.29	chr1	-	2591	17	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	30	-696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	216.00556090932	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCTATTTTCTTAAA	NA	False	NA	0	True	AATAAA	-26	NA	58544054	58502625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58505605_58505668_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.3	chr1	-	6349	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	140	-2928	-14	2928	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTTTGTTTTTT	NA	False	NA	NA	False	CATAAA	-27	NA	58544128	58499001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.30	chr1	-	2733	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-30	-698	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTCTATTTTCTTA	NA	False	NA	-2	True	AATAAA	-24	NA	58544144	58502627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.31	chr1	-	2833	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	27	701	27	-701	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACATTTTCTATTTTC	NA	False	NA	-5	True	AATAAA	-21	NA	58544241	58502630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.32	chr1	-	2512	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	30	-702	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	138.646808473906	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGACATTTTCTATTTT	NA	False	NA	-6	True	AATAAA	-20	NA	58544054	58502631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.33	chr1	-	6119	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-7	-702	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	134.951458657443	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGACATTTTCTATTTT	NA	False	NA	-6	True	AATAAA	-20	NA	58544121	58502631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58536067_58536284_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.34	chr1	-	2602	17	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	21	-704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	139.360088888462	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGACATTTTCTATT	NA	False	NA	-8	True	AATAAA	-18	NA	58544063	58502633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58532004_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.35	chr1	-	2597	17	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-7	-710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	139.360088888462	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTACATTGACATTT	NA	False	NA	-14	True	AATAAA	-12	NA	58544121	58502639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520267_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.36	chr1	-	5584	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	134.951458657443	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTTCTTGCTGGT	NA	False	NA	-7	True	GATAAA	-23	NA	58544085	58503130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58536067_58536284_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.37	chr1	-	2229	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	126	1206	-28	227	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCTGGAGACTTCTTG	NA	False	NA	-12	True	GATAAA	-18	NA	58544142	58503135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.38	chr1	-	2312	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-4	226	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_11	187.326059236658	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCTGGAGACTTCTT	NA	False	NA	-13	True	GATAAA	-17	NA	58544118	58503136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58520981_58521096_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.39	chr1	-	2221	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-28	225	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTCTGGAGACTTCT	NA	False	NA	-14	True	GATAAA	-16	NA	58544142	58503137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.4	chr1	-	6324	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-4	2919	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATATTTGTTGTT	NA	False	NA	NA	False	CATAAA	-18	NA	58544118	58499010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.40	chr1	-	2106	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-4	224	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	160.539909368356	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCTCTGGAGACTTC	NA	False	NA	-15	True	GATAAA	-15	NA	58544118	58503138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.43	chr1	-	2014	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	21	224	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	138.646808473906	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCTCTGGAGACTTC	NA	False	NA	-15	True	GATAAA	-15	NA	58544063	58503138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.44	chr1	-	1585	12	NIC	ENSMUSG00000026037.15	novel	1587	15	NA	NA	3961	224	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	163.241645148362	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCTCTGGAGACTTC	NA	False	NA	-15	True	GATAAA	-15	NA	58536614	58503138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58536534
ES.531.45	chr1	-	2125	17	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-6	224	combination_of_known_splicesites	FALSE	canonical	1	4	junction_16	135.814671519685	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCTCTGGAGACTTC	NA	False	NA	-15	True	GATAAA	-15	NA	58544090	58503138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58543930
ES.531.46	chr1	-	2228	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	27	223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	174.046334472203	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTCTCTGGAGACTT	NA	False	NA	-16	True	GATAAA	-14	NA	58544057	58503139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58524082_58524171_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.47	chr1	-	2439	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	28	222	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	171.532894660521	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTCTCTGGAGACT	NA	False	NA	-17	True	GATAAA	-13	NA	58544240	58503140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58520981_58521099_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.49	chr1	-	2167	18	NNC	ENSMUSG00000026037.15	novel	372	5	NA	NA	-4	-211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	131.860679333626	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAACAAATAAATATA	NA	False	NA	NA	False	NA	NA	NA	58544088	58503573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503880_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.5	chr1	-	4563	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	150	-1152	-4	1152	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAGGCCCTACTCTCA	NA	False	NA	NA	False	AATAAA	-33	NA	58544118	58500777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.50	chr1	-	175	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATAAGTGCTAG	NA	False	NA	NA	False	NA	NA	NA	58505968	58505793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58505800_58506000
ES.531.51	chr1	-	178	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGAACTT	NA	False	NA	NA	False	NA	NA	NA	58516170	58515992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58516000_58516200
ES.531.52	chr1	-	200	2	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	510	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCATGGGCAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	58614609	58536071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58536117_58614454
ES.531.53	chr1	-	3781	4	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-2	3433	intron_retention	FALSE	canonical	3	463	junction_3	56.7802782663136	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCATGGGCAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	58544086	58536071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.54	chr1	-	3943	4	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	126	34142	-28	3433	intron_retention	FALSE	canonical	3	517	junction_2	36.2613966759264	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCATGGGCAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	58544142	58536071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_58536625_58539399_58539544_58540481_58540586_58541000
ES.531.55	chr1	-	4464	3	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	20	34142	20	3433	intron_retention	FALSE	canonical	3	517	junction_2	8.5	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCATGGGCAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	58544248	58536071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_58536625_58539399_58539544_58540481
ES.531.56	chr1	-	994	5	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	2	3431	combination_of_known_junctions	FALSE	canonical	3	142	junction_4	179.722703073374	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGTCATGGGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	58544082	58536073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.57	chr1	-	1009	5	ISM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	132	34189	-22	3386	5prime_fragment	FALSE	canonical	3	463	junction_4	49.266494699745	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	58544136	58536118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.58	chr1	-	2950	1	Genic_Genomic	ENSMUSG00000038174.15	novel	NA	NA	NA	NA	42321	2856	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTTATGA	NA	False	NA	NA	False	NA	NA	NA	58562058	58559108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_58559100_58562100
ES.531.6	chr1	-	3378	18	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	134.101030962444	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTTTGTTTTGAAGTG	NA	False	NA	4	True	AATAAA	-27	NA	58544085	58501925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519501_58520114_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.60	chr1	-	8734	12	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	9.78360916351746	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCCTGAGTTGATTGT	NA	False	NA	-1	True	TATAAA	-28	NA	58625444	58561966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58604926_58605114_58625370
ES.531.61	chr1	-	8661	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	20	4	-6	-4	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTCCCTGAGTTGATT	NA	False	NA	-3	True	TATAAA	-26	NA	58625462	58561968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.62	chr1	-	8810	13	FSM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	-19	-4210	-8	-5	multi-exon	FALSE	canonical	3	6	junction_2	9.82450168371574	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTCCCTGAGTTGAT	NA	False	NA	-4	True	TATAAA	-25	NA	58625444	58561969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.63	chr1	-	8227	8	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	7	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.1638474042331	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATTTCCCTGAGTTG	NA	False	NA	-6	True	TATAAA	-23	NA	58625475	58561971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58605015_58605114_58625370
ES.531.64	chr1	-	8549	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	18	118	-8	-118	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTGTCTCCTGAGG	NA	False	NA	-117	True	AATAAA	-15	NA	58625464	58562082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.65	chr1	-	2414	1	ISM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	60756	348	39653	-348	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	58564726	58562312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_58562300_58564700
ES.531.66	chr1	-	5521	13	FSM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	-15	-925	-4	925	multi-exon	FALSE	canonical	3	6	junction_2	9.82450168371574	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTCTAACTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	58625440	58565254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.67	chr1	-	5376	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	18	3291	-8	924	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGTTTCTAACTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	58625464	58565255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.68	chr1	-	4434	13	NIC	ENSMUSG00000038174.15	novel	4581	13	NA	NA	3	-211	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.4997222191357	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625420	58566390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58601798_58601947_58604926_58605114_58625370
ES.531.69	chr1	-	4252	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	7	4426	7	-211	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625475	58566390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.7	chr1	-	3562	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	-1	0	-1	0	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	False	NA	0	True	AATAAA	-23	NA	58544269	58501929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.531.70	chr1	-	4324	12	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	-2	-211	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	9.78360916351746	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625458	58566390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58604926_58605114_58625370
ES.531.71	chr1	-	4420	13	FSM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	-50	211	7	-211	multi-exon	FALSE	canonical	3	6	junction_2	9.82450168371574	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625475	58566390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.72	chr1	-	4509	13	NIC	ENSMUSG00000038174.15	novel	4581	13	NA	NA	7	-211	combination_of_known_junctions	FALSE	canonical	2	2	junction_11	12.0450543101031	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625475	58566390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58604926_58605114_58625370
ES.531.73	chr1	-	3330	1	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	34635	-235	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58569744	58566414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58566400_58569700
ES.531.74	chr1	-	3860	12	NIC	ENSMUSG00000038174.15	novel	8685	12	NA	NA	-1	68	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	9.78360916351746	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAGAATTGTAA	NA	False	NA	NA	False	AGTAAA	-4	NA	58625437	58566833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58604926_58605114_58625370
ES.531.75	chr1	-	3529	13	FSM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	5	1047	3	-325	multi-exon	FALSE	canonical	3	6	junction_2	9.82450168371574	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTGTCCTCTTAATT	NA	False	NA	NA	False	AATGAA	-21	NA	58625420	58567226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58573643_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.76	chr1	-	3101	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	45	5539	-1	-602	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAGTAGCATTTGGTA	NA	False	NA	NA	False	AGTAAA	-15	NA	58625437	58567503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.77	chr1	-	2278	12	ISM	ENSMUSG00000038174.15	ENSMUST00000097724.10	4581	13	-11	6539	0	-4477	5prime_fragment	FALSE	canonical	3	6	junction_1	8.27921823274725	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAGAGATCAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	58625436	58572718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_58573812_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ES.531.78	chr1	-	381	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	58614806	58614425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58614400_58614800
ES.531.8	chr1	-	3415	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	False	NA	0	True	AATAAA	-23	NA	58544128	58501929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
ES.531.9	chr1	-	3493	19	NNC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	171.532894660521	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTAGTTTTGTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	58544085	58501931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58520981_58521099_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ES.5310.1	chr11	+	5082	1	Intergenic	novelGene_4177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	70267706	70272788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70267700_70272800
ES.5311.1	chr11	-	4091	1	Intergenic	novelGene_4176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTATGTGGGGCCAGTT	NA	False	NA	NA	False	AATAAA	-35	NA	70271606	70267515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70267500_70271600
ES.5312.1	chr11	-	4015	1	Intergenic	novelGene_4178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTGTCCTTTAATG	NA	False	NA	NA	False	NA	NA	NA	70279116	70275101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70275100_70279100
ES.5313.1	chr11	+	6104	10	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70287530_70287643_70287930_70288275_70288369_70288473_70288522_70288894_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5313.2	chr11	+	5356	13	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70286017_70286125_70286335_70286485_70286541_70287110_70287530_70287643_70288364_70288468_70288522_70288894_70289043_70289306_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5313.3	chr11	+	4900	16	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70286017_70286125_70286335_70286485_70286541_70287110_70287275_70287384_70287530_70287643_70287759_70287838_70287930_70288275_70288364_70288468_70288602_70288894_70289043_70289306_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5313.4	chr11	+	5115	14	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70286017_70286125_70286335_70286485_70286541_70287110_70287530_70287643_70287759_70287838_70287930_70288275_70288602_70288894_70289043_70289306_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5313.5	chr11	+	5326	14	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70286017_70286125_70286335_70286485_70286541_70287110_70287275_70287384_70287530_70287643_70288364_70288468_70288602_70288894_70289043_70289306_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5313.6	chr11	+	5456	12	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70282816	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70283848_70284586_70286017_70286125_70286335_70286485_70286541_70287110_70287275_70287384_70287530_70287643_70287759_70287838_70287930_70288275_70289366_70292474_70292550_70292744_70292893_70297082
ES.5313.7	chr11	+	2880	13	Antisense	novelGene_ENSMUSG00000018921.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGTGGTGCCGCAT	NA	False	NA	NA	False	AATAAA	-34	NA	70285917	70297985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70286017_70286125_70286335_70286485_70286541_70287110_70287275_70287384_70287530_70287643_70287930_70288276_70288361_70288466_70288602_70288894_70289366_70292474_70292550_70292744_70292893_70296452_70296557_70297080
ES.5314.1	chr11	-	5700	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-3	-2262	0	2262	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAACTAAAGCAAGGAAAG	NA	False	NA	NA	False	AATAAA	-19	NA	70300857	70281446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.12	chr11	-	6882	16	ISM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-3	-2	0	2	intron_retention	FALSE	canonical	3	551	junction_9	48.8459710609676	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTGCTTTGGCTCT	NA	False	NA	-25	True	AATAAA	-15	NA	70300857	70283706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082
ES.5314.14	chr11	-	3285	16	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_4	165.200753293951	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGCTGCTTTGGCTC	NA	False	NA	-26	True	AATAAA	-14	NA	70300863	70283707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.16	chr11	-	3347	18	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.866769712961	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGTGCTGCTTTGGCTC	NA	False	NA	-26	True	AATAAA	-14	NA	70300853	70283707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70284908_70284995_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.17	chr11	-	3328	16	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	168.059698387871	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300853	70283708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70297082_70297148_70300589
ES.5314.18	chr11	-	3432	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_14	156.995023806489	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300857	70283708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292887_70296452_70296559_70297082_70297148_70300589
ES.5314.19	chr11	-	3076	16	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	3747	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	167.595889634031	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70297107	70283708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70288989_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082
ES.5314.2	chr11	-	1664	2	ISM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	16055	-1312	16055	1312	3prime_fragment	FALSE	canonical	3	725	junction_1	0	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATTTGGGTATAATTC	NA	False	NA	NA	False	NA	NA	NA	70284799	70282396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70283849_70284587
ES.5314.20	chr11	-	3809	15	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	551	junction_8	46.9960918913608	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300854	70283708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.21	chr11	-	3655	15	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	-28	-1	intron_retention	FALSE	canonical	3	551	junction_7	47.6612729453957	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300885	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287530_70287643_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.22	chr11	-	3451	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	162.991899722041	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300853	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292911_70296452_70296559_70297082_70297148_70300589
ES.5314.23	chr11	-	3398	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	163.322103142839	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300853	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296524_70297082_70297148_70300589
ES.5314.25	chr11	-	3356	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	162.084553069532	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300856	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288519_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.26	chr11	-	3271	15	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_14	167.543354121266	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300862	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70300589
ES.5314.27	chr11	-	7221	15	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	1	-1	intron_retention	FALSE	canonical	3	551	junction_8	50.0952663860141	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300853	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082
ES.5314.29	chr11	-	3693	16	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	5	-1	intron_retention	FALSE	canonical	3	551	junction_9	47.103385110721	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTGTGCTGCTTTGGC	NA	False	NA	-28	True	AATAAA	-12	NA	70300849	70283709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.3	chr11	-	3972	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-3	-534	0	534	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTTTACATAGG	NA	False	NA	NA	False	AATATA	-18	NA	70300857	70283174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.32	chr11	-	3737	16	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	5	-2	intron_retention	FALSE	canonical	2	9	junction_8	166.293635877424	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCCTGTGCTGCTTTGG	NA	False	NA	-29	True	AATAAA	-11	NA	70300849	70283710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70288327_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.33	chr11	-	5940	9	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	8990	-2	intron_retention	FALSE	canonical	3	551	junction_8	58.3539844397964	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCCTGTGCTGCTTTGG	NA	False	NA	-29	True	AATAAA	-11	NA	70291864	70283710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468
ES.5314.34	chr11	-	3316	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	217.308743136925	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACCCTGTGCTGCTTTGG	NA	False	NA	-29	True	AATAAA	-11	NA	70300854	70283710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288327_70288468_70288519_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.37	chr11	-	3453	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	163.734875255701	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACCCTGTGCTGCTTTG	NA	False	NA	-30	True	AATAAA	-10	NA	70300857	70283711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287948_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.38	chr11	-	7599	13	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	551	junction_7	48.4810959722103	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACCCTGTGCTGCTTTG	NA	False	NA	-30	True	AATAAA	-10	NA	70300859	70283711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287530_70287643_70287761_70287840_70288364_70288468_70288599_70288891_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082
ES.5314.4	chr11	-	3648	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	-186	-27	-183	27	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCCAGCCTCAAGCCTG	NA	False	NA	0	True	AATAAA	-40	NA	70301040	70283681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.40	chr11	-	3402	17	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	220.079735195565	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACCCTGTGCTGCTTTG	NA	False	NA	-30	True	AATAAA	-10	NA	70300857	70283711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287722_70287840_70287930_70288275_70288370_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5314.42	chr11	-	560	4	FSM	ENSMUSG00000018921.12	ENSMUST00000135148.2	562	4	4	-2	1	2	multi-exon	FALSE	canonical	2	14	junction_1	310.061284264901	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGATCTTTTAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	70300853	70293454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70293580_70296452_70296559_70297082_70297148_70300589
ES.5314.5	chr11	-	1982	10	NNC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	12504	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	212.379639116162	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGGCTCTGCCAC	NA	False	NA	-20	True	AATAAA	-20	NA	70288350	70283701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70283849_70284587_70285198_70285645_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275
ES.5314.7	chr11	-	3561	16	NIC	ENSMUSG00000018921.12	novel	3435	17	NA	NA	-2	7	intron_retention	FALSE	canonical	3	551	junction_8	47.2381201996862	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTTGGCTCTGCCAC	NA	False	NA	-20	True	AATAAA	-20	NA	70300859	70283701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ES.5315.1	chr11	-	176	1	Intergenic	novelGene_4179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGATGAACACATAA	NA	False	NA	NA	False	NA	NA	NA	70309143	70308967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70309000_70309100
ES.5316.1	chr11	-	168	1	Intergenic	novelGene_4180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTATTTATTTATTTT	6750	False	NA	NA	False	NA	NA	NA	70315778	70315610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70315600_70315800
ES.5317.1	chr11	+	166	1	Intergenic	novelGene_4181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTCT	NA	False	NA	NA	False	NA	NA	NA	70316123	70316289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70316100_70316300
ES.5318.1	chr11	+	1790	16	NNC	ENSMUSG00000060216.16	novel	1352	16	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_15	66.643796077021	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323256	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989_70331102_70331261
ES.5318.10	chr11	+	1927	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	-4	-146	-2	-3	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323458	70331646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.11	chr11	+	1804	15	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	84.118842073799	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAATGTGTATGTGTTC	NA	False	NA	12	True	AATAAA	-12	NA	70323459	70331498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.12	chr11	+	3097	10	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	232	junction_1	15.5991452757301	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAATGTGTATGTGTTCT	NA	False	NA	13	True	AATAAA	-13	NA	70323459	70331499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329612_70330297_70330732_70330989
ES.5318.13	chr11	+	2001	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	232	junction_1	17.0300812869185	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTGAAACTTGGCTT	NA	False	NA	33	True	AATAAA	-39	NA	70323459	70331645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330732_70330989
ES.5318.14	chr11	+	1753	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	69.2760302510684	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327211_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.15	chr11	+	1865	16	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	100.94037844193	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70324255_70324344_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.16	chr11	+	1664	15	NIC	ENSMUSG00000060216.16	novel	1352	16	NA	NA	2	-3	intron_retention	FALSE	canonical	3	12	junction_14	66.0528545320847	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323464	70331646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989_70331102_70331581
ES.5318.17	chr11	+	2179	14	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	2	-2	intron_retention	FALSE	canonical	3	204	junction_12	20.8457280683171	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAAACTTGGCTTGG	NA	False	NA	35	True	AATAAA	-41	NA	70323464	70331647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.18	chr11	+	1441	16	FSM	ENSMUSG00000060216.16	ENSMUST00000079056.9	1443	16	-6	8	2	-3	multi-exon	FALSE	canonical	3	12	junction_15	82.1467521505804	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323464	70331646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989_70331102_70331581
ES.5318.19	chr11	+	2113	13	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	73.858488942632	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323464	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329222_70329473_70329612_70330297_70330382_70330487
ES.5318.2	chr11	+	2525	14	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-189	0	intron_retention	FALSE	canonical	3	204	junction_12	22.8726859663138	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323271	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.20	chr11	+	2147	14	ISM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-14	-27	2	-2	intron_retention	FALSE	canonical	3	204	junction_13	22.4140699683118	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAAACTTGGCTTGG	NA	False	NA	35	True	AATAAA	-41	NA	70323464	70331647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676
ES.5318.21	chr11	+	1718	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	67.7913967210276	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323464	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328420_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.22	chr11	+	1632	17	NNC	ENSMUSG00000060216.16	novel	1352	16	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	100.638721890483	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323469	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329326_70329400_70329491_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989_70331102_70331261
ES.5318.23	chr11	+	5116	13	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	-1	1	intron_retention	FALSE	canonical	3	204	junction_11	22.5517922421552	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTATGTGTTCTGT	NA	False	NA	15	True	AATAAA	-15	NA	70323469	70331501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.24	chr11	+	5765	10	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	204	junction_8	19.0379737483915	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323472	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.25	chr11	+	3922	9	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	232	junction_1	14.4865239101725	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323473	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70330382_70330487
ES.5318.26	chr11	+	1990	14	ISM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-4	120	4	0	intron_retention	FALSE	canonical	3	204	junction_13	22.4140699683118	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323474	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676
ES.5318.27	chr11	+	1601	16	NNC	ENSMUSG00000060216.16	novel	1443	16	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_15	83.5718187482413	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323474	70331496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989_70331102_70331261
ES.5318.28	chr11	+	1661	14	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	71.5468150623222	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323474	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330667_70330732_70330989
ES.5318.29	chr11	+	2645	11	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	4	0	intron_retention	FALSE	canonical	3	232	junction_1	14.1989436226784	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323474	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329612_70330297_70330382_70330487
ES.5318.3	chr11	+	1898	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	-118	-3	-116	3	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGTGTTCTGTCA	NA	False	NA	17	True	AATAAA	-17	NA	70323344	70331503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.30	chr11	+	1866	14	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_1	67.3731110657253	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323475	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330732_70330989
ES.5318.31	chr11	+	1908	15	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	17	junction_1	65.7627538650745	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACTTGGCTTGGTCTGT	NA	False	NA	40	True	NA	NA	NA	70323476	70331652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.32	chr11	+	1826	16	NNC	ENSMUSG00000060216.16	novel	1352	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	104.546130169095	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323477	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70324255_70324344_70326367_70326399_70326988_70327050_70327156_70327211_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.34	chr11	+	2076	13	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	232	junction_1	16.5906600230371	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323495	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329612_70330297_70330382_70330487_70330732_70330989
ES.5318.35	chr11	+	1892	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_3	85.8080736889256	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGAAACTTGGCTTG	NA	False	NA	34	True	AATAAA	-40	NA	70323519	70331646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327130_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.36	chr11	+	4752	13	NIC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	5	-4	intron_retention	FALSE	canonical	3	204	junction_11	20.605419998955	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323528	70331496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.4	chr11	+	1857	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	-127	118	-109	2	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTATGTGTTCTGTC	NA	False	NA	16	True	AATAAA	-16	NA	70323351	70331502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5318.5	chr11	+	1857	14	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-109	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	88.1437771132312	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323351	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ES.5318.6	chr11	+	1872	15	NNC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	89.9866486695416	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323358	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330489_70330568_70330676_70330732_70330989
ES.5318.7	chr11	+	1847	15	NNC	ENSMUSG00000060216.16	novel	1848	15	NA	NA	-80	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.5915195396446	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGTGTTCTGTCA	NA	False	NA	17	True	AATAAA	-17	NA	70323380	70331503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330469_70330568_70330676_70330732_70330989
ES.5318.8	chr11	+	2400	12	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-35	-4	intron_retention	FALSE	canonical	3	232	junction_1	16.3196378180521	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATGAATGTGTATGTGT	NA	False	NA	10	True	AATAAA	-10	NA	70323425	70331496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329612_70330297_70330382_70330487
ES.5318.9	chr11	+	1731	14	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	69.6723523816336	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323444	70331500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ES.5319.1	chr11	+	939	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	-34	-3	-34	3	multi-exon	FALSE	canonical	3	117	junction_2	11	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCTCTCTCTCGCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	70342710	70344556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70342890_70343033_70343165_70343927
ES.5319.2	chr11	+	728	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	-14	188	-14	-25	multi-exon	FALSE	canonical	3	117	junction_2	11	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGTGGCTCACACCTGT	NA	False	NA	8	True	AATAAA	-24	NA	70342730	70344365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70342890_70343033_70343165_70343927
ES.5319.3	chr11	+	1062	2	FSM	ENSMUSG00000018923.14	ENSMUST00000152348.2	870	2	-26	-166	-13	3	multi-exon	FALSE	canonical	3	117	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCTCTCTCTCGCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	70342731	70344556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70343165_70343927
ES.532.1	chr1	+	828	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	-5	-60	-5	60	multi-exon	FALSE	canonical	3	979	junction_1	90.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCCTAGGCTGTATGG	NA	False	NA	112	True	NA	NA	NA	58625537	58635183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58625830_58630248_58630409_58634807
ES.532.2	chr1	+	504	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	218	41	218	-41	multi-exon	FALSE	canonical	3	979	junction_1	90.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAACTCTTAAATA	NA	False	NA	11	True	AATAAA	-16	NA	58625760	58635082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58625830_58630248_58630409_58634807
ES.532.3	chr1	+	5809	2	NIC	ENSMUSG00000026032.9	novel	763	3	NA	NA	219	846	intron_retention	FALSE	canonical	3	1160	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTAAAGTTGAGAGT	NA	False	NA	NA	False	NA	NA	NA	58625761	58635969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58630409_58634807
ES.532.4	chr1	+	604	4	NNC	ENSMUSG00000026032.9	novel	763	3	NA	NA	232	-44	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	544.016135381622	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTAACTCTTAA	NA	False	NA	8	True	AATAAA	-13	NA	58625774	58635079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58625830_58629898_58630016_58630248_58630409_58634807
ES.532.5	chr1	+	753	4	NNC	ENSMUSG00000026032.9	novel	763	3	NA	NA	238	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	538.769173414944	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTGTAACTCTTAAAT	NA	False	NA	10	True	AATAAA	-15	NA	58625780	58635081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58625830_58626617_58626888_58630248_58630409_58634807
ES.5320.1	chr11	+	182	1	Intergenic	novelGene_4182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	70349153	70349335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70349200_70349300
ES.5321.1	chr11	+	2920	2	NIC	ENSMUSG00000040829.15	novel	3696	11	NA	NA	2542	0	intron_retention	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTTGACTTCACCTT	NA	False	NA	NA	False	AATAAA	-13	NA	70353932	70357025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70355760_70355932
ES.5321.2	chr11	+	833	6	NIC	ENSMUSG00000040829.15	novel	2100	12	NA	NA	3285	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0.8	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTTGACTTCACCTT	NA	False	NA	NA	False	AATAAA	-13	NA	70354675	70357025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70354823_70355181_70355271_70355358_70355458_70355605_70355760_70355932_70355992_70356740
ES.5322.1	chr11	-	2412	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	30	257	30	-2	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAATACTAAAGATTA	7630	False	NA	NA	False	AATAAA	-20	NA	70350780	70345065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
ES.5322.2	chr11	-	2443	6	NIC	ENSMUSG00000018920.12	novel	1662	6	NA	NA	68	-3	intron_retention	FALSE	canonical	1	2	junction_3	8.06473806146238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGTAATACTAAAGATT	7668	False	NA	NA	False	AATAAA	-19	NA	70350742	70345066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70346271_70346480_70346889_70348901_70348972_70349570_70349654_70349854_70349994_70350203
ES.5322.3	chr11	-	1473	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	19	1207	19	0	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCCCCCATTGACAT	7619	False	NA	NA	False	NA	NA	NA	70350791	70346015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
ES.5322.4	chr11	-	4899	6	NNC	ENSMUSG00000018920.12	novel	1662	6	NA	NA	-3340	0	intron_retention	FALSE	canonical	0	0	junction_3	8.42377587546108	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCCCCCATTGACAT	4260	False	NA	NA	False	NA	NA	NA	70354150	70346015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70346271_70346480_70346889_70348901_70348969_70349570_70349654_70349854_70349994_70350203
ES.5322.5	chr11	-	4564	2	ISM	ENSMUSG00000018920.12	ENSMUST00000154475.2	1662	6	-132	1	20	-1	intron_retention	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGCCCCCATTGACA	7620	False	NA	NA	False	NA	NA	NA	70350790	70346016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70346271_70346480
ES.5323.1	chr11	-	233	1	Intergenic	novelGene_4183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTTAGACTACACACCC	9147	False	NA	NA	False	AATAAA	-14	NA	70372814	70372581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70372600_70372800
ES.5324.1	chr11	+	173	1	Intergenic	novelGene_4184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	70375072	70375245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70375100_70375200
ES.5325.1	chr11	+	173	1	Intergenic	novelGene_4185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTTCT	NA	False	NA	NA	False	NA	NA	NA	70387364	70387537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70387400_70387500
ES.5326.1	chr11	-	137	1	Intergenic	novelGene_4186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAGGCAGAG	9471	False	NA	NA	False	AATAAA	-27	NA	70397670	70397533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70397500_70397700
ES.5327.1	chr11	+	683	3	FSM	ENSMUSG00000018919.11	ENSMUST00000141924.2	456	3	-18	-209	-18	-2	multi-exon	FALSE	canonical	3	5	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAATGTGCCAGTGATG	NA	False	NA	NA	False	AATAAA	-18	NA	70401013	70402002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70401178_70401394_70401579_70401667
ES.5328.1	chr11	+	1102	1	NIC	ENSMUSG00000046811.4	novel	1216	3	NA	NA	-5	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCGGCGTTATGTATGA	NA	False	NA	NA	False	AATAAA	-21	NA	70410459	70411561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70410500_70411600
ES.5329.1	chr11	+	193	1	Intergenic	novelGene_4187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATCAGGAAAGCCA	NA	False	NA	NA	False	AATAAA	-9	NA	70413052	70413245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70413100_70413200
ES.533.1	chr1	+	1738	1	FSM	ENSMUSG00000059647.6	ENSMUST00000081455.6	552	1	-92	-1094	-92	1094	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGACGCAGTCCTGGT	NA	False	NA	NA	False	AATAAA	-33	NA	58685754	58687492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58685800_58687500
ES.533.2	chr1	+	1548	2	Genic_Genomic	ENSMUSG00000059647.6	novel	552	1	NA	NA	-81	1078	multi-exon	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	58685765	58687476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_58686014_58686176
ES.5330.1	chr11	+	860	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-55	-7	-36	7	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGAAGGTTCTTGA	NA	False	NA	30	True	AATAAA	-20	NA	70416156	70418482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ES.5330.10	chr11	+	922	5	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-14	3	5	-3	intron_retention	FALSE	canonical	3	5766	junction_2	311.248594374336	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGTTTCTGTGTGA	NA	False	NA	20	True	AATAAA	-10	NA	70416197	70418472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004
ES.5330.12	chr11	+	814	6	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2410.20721100905	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGTGTGAAGGT	NA	False	NA	24	True	AATAAA	-14	NA	70416202	70418476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70416322_70416710_70416779_70417119_70417258_70417369_70417500_70418004_70418150_70418262
ES.5330.13	chr11	+	1045	6	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2426.85810050773	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTGTTCTGCCTGCA	NA	False	NA	16	True	AATAAA	-17	NA	70416202	70418683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70416352_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ES.5330.15	chr11	+	1634	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-8	-210	-8	1	intron_retention	FALSE	canonical	3	5766	junction_2	106.790553057011	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTCTGCCTGCATG	NA	False	NA	18	True	AATAAA	-19	NA	70416203	70418685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369
ES.5330.17	chr11	+	1305	5	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	5742	junction_4	109.33206300075	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGACGTTTCTGTGT	NA	False	NA	18	True	AATAAA	-8	NA	70416204	70418470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70418150_70418262
ES.5330.18	chr11	+	782	6	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2427.25512462123	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGTTTCTGTGTGA	NA	False	NA	20	True	AATAAA	-10	NA	70416213	70418472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70416306_70416705_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ES.5330.2	chr11	+	1036	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	-28	-210	-9	1	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTTCTGCCTGCATG	NA	False	NA	18	True	AATAAA	-19	NA	70416183	70418685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ES.5330.3	chr11	+	2284	1	Genic_Genomic	ENSMUSG00000018286.7	novel	NA	NA	NA	NA	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGTGTGAAGGT	NA	False	NA	24	True	AATAAA	-14	NA	70416192	70418476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_70416200_70418500
ES.5330.6	chr11	+	2051	3	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	2	1	intron_retention	FALSE	canonical	3	5742	junction_2	139.5	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGTGTGAAGGT	NA	False	NA	24	True	AATAAA	-14	NA	70416194	70418476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70417252_70417369_70418150_70418262
ES.5330.7	chr11	+	1525	5	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	4	-2	intron_retention	FALSE	canonical	3	5742	junction_4	109.33206300075	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTGTTGTTCTGCCTGC	NA	False	NA	15	True	AATAAA	-16	NA	70416196	70418682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70418150_70418262
ES.5330.8	chr11	+	698	5	NNC	ENSMUSG00000018286.7	novel	798	6	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2661.5505349326	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTCTGTGTGAAGGTTC	NA	False	NA	26	True	AATAAA	-16	NA	70416197	70418478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70416273_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ES.5330.9	chr11	+	1539	4	NIC	ENSMUSG00000018286.7	novel	798	6	NA	NA	5	-3	intron_retention	FALSE	canonical	3	5742	junction_3	340.856111708282	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGTTTCTGTGTGA	NA	False	NA	20	True	AATAAA	-10	NA	70416197	70418472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70417252_70417369_70417500_70418004_70418150_70418262
ES.5331.1	chr11	+	4665	23	NNC	ENSMUSG00000020828.14	novel	875	7	NA	NA	-13	-6	intron_retention	FALSE	non_canonical	0	0	junction_21	6.47053078155427	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGGCCCATGCCTCTTCT	NA	False	NA	-4	True	AATAAA	-8	NA	70430876	70448930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447837_70447949_70448164
ES.5331.10	chr11	+	3745	25	FSM	ENSMUSG00000020828.14	ENSMUST00000108557.10	3655	25	-90	0	-53	0	multi-exon	FALSE	canonical	0	0	junction_20	6.36995988126212	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431078	70448936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446124_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.11	chr11	+	3592	24	NNC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	-34	-2	intron_retention	FALSE	canonical	0	0	junction_9	5.85230957914975	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGCCTCTTCTTGGA	NA	False	NA	0	True	AATAAA	-12	NA	70431097	70448934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70441954_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.12	chr11	+	4505	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-30	-816	-30	816	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	AATAGA	-24	NA	70431101	70449752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.13	chr11	+	5892	10	FSM	ENSMUSG00000020828.14	ENSMUST00000108556.2	3391	10	-80	-2421	-30	2421	multi-exon	FALSE	canonical	2	8	junction_9	4	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATTTTTAAAATCC	NA	False	NA	NA	False	AAAAAG	-6	NA	70431101	70439645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953
ES.5331.14	chr11	+	2037	11	NNC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	-24	-5	intron_retention	FALSE	canonical	0	0	junction_10	6.35688603012513	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	70431107	70437219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70436526
ES.5331.15	chr11	+	3502	20	NNC	ENSMUSG00000020828.14	novel	3655	25	NA	NA	942	-2	intron_retention	FALSE	canonical	0	0	junction_7	5.81144157551253	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGCCTCTTCTTGGA	NA	False	NA	0	True	AATAAA	-12	NA	70432123	70448934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70441954_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445777_70445876_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.16	chr11	+	2965	15	NIC	ENSMUSG00000020828.14	novel	3655	25	NA	NA	2405	-1	intron_retention	FALSE	canonical	2	6	junction_2	6.03560862122217	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGCCTCTTCTTGGAG	919	False	NA	1	True	AATAAA	-13	NA	70433586	70448935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.2	chr11	+	3507	25	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	6.19755776271768	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70430877	70448936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.3	chr11	+	3341	24	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	4	0	combination_of_known_splicesites	TRUE	canonical	2	2	junction_1	5.92422216983633	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70430893	70448936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.4	chr11	+	3296	25	NNC	ENSMUSG00000020828.14	novel	875	7	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	6.81909084849293	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70430991	70448936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446518_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.5	chr11	+	3794	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	-134	-1	108	1	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTCTTCTTGGAGAT	NA	False	NA	3	True	AATAAA	-15	NA	70430997	70448937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.6	chr11	+	3631	24	NNC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	108	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.0785656451549	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCATGCCTCTTCTTGG	NA	False	NA	-1	True	AATAAA	-11	NA	70430997	70448933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433671_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.7	chr11	+	3638	24	NIC	ENSMUSG00000020828.14	novel	3659	25	NA	NA	112	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	5.25817394108515	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGCCTCTTCTTGGAG	NA	False	NA	1	True	AATAAA	-13	NA	70431001	70448935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.8	chr11	+	3489	25	NNC	ENSMUSG00000020828.14	novel	875	7	NA	NA	118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	6.81909084849293	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGCCTCTTCTTGGAG	NA	False	NA	1	True	AATAAA	-13	NA	70431007	70448935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446321_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5331.9	chr11	+	4353	24	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	-114	-3	intron_retention	FALSE	canonical	2	2	junction_1	6.27564681217427	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCATGCCTCTTCTTGG	NA	False	NA	-1	True	AATAAA	-11	NA	70431017	70448933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ES.5332.1	chr11	-	153	1	Antisense	novelGene_ENSMUSG00000020828.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	70436652	70436499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_70436500_70436700
ES.5333.1	chr11	+	5062	32	FSM	ENSMUSG00000020827.19	ENSMUST00000072873.14	4610	32	-97	-355	-88	0	multi-exon	TRUE	canonical	3	41	junction_20	18.9436427990342	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1378	False	NA	NA	False	AATAAA	-24	NA	70453618	70505309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.10	chr11	+	4998	32	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.0913019673594	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1448	False	NA	NA	False	AATAAA	-17	NA	70453688	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498584_70498847_70499166_70499268_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.13	chr11	+	6037	30	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-15	2	intron_retention	FALSE	canonical	2	4	junction_19	22.8567893212	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1451	False	NA	NA	False	AATAAA	-21	NA	70453691	70505306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.14	chr11	+	5033	33	NNC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	25.5709796449021	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACCATTTTGAGATC	1452	False	NA	NA	False	AATAAA	-14	NA	70453692	70505299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500202_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.15	chr11	+	4876	31	NNC	ENSMUSG00000020827.19	novel	3903	31	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	30.4088620123952	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACCATTTTGAGATC	1452	False	NA	NA	False	AATAAA	-14	NA	70453692	70505299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500102_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503744_70503893_70503980_70504121_70504454
ES.5333.16	chr11	+	5062	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-11	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	31.0683313188446	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1455	False	NA	NA	False	AATAAA	-17	NA	70453695	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497456_70497544_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.17	chr11	+	4999	32	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.3206397264925	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1455	False	NA	NA	False	AATAAA	-17	NA	70453695	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500102_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.18	chr11	+	5087	34	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	32.8243789442575	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1456	False	NA	NA	False	AATAAA	-19	NA	70453696	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497456_70497544_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.19	chr11	+	5080	32	NNC	ENSMUSG00000020827.19	novel	4865	32	NA	NA	-9	0	intron_retention	FALSE	canonical	1	3	junction_25	27.4890575145548	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1457	False	NA	NA	False	AATAAA	-19	NA	70453697	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502141_70502304_70502411_70502556_70503062_70503198_70503306_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.2	chr11	+	4965	32	FSM	ENSMUSG00000020827.19	ENSMUST00000102559.11	4865	32	-102	2	-85	-2	multi-exon	FALSE	canonical	3	21	junction_17	25.4119032798382	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1381	False	NA	NA	False	AATAAA	-17	NA	70453621	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.20	chr11	+	5728	31	NIC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	41	junction_19	19.0236402638635	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1460	False	NA	NA	False	AATAAA	-17	NA	70453700	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.21	chr11	+	4232	25	NIC	ENSMUSG00000020827.19	novel	4865	32	NA	NA	-3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	31.7375303597072	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1463	False	NA	NA	False	AATAAA	-16	NA	70453703	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.23	chr11	+	4329	27	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.6325471898023	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1465	False	NA	NA	False	AATAAA	-16	NA	70453705	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70492792_70492884_70494696_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.24	chr11	+	4940	32	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	33.105859282528	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1465	False	NA	NA	False	AATAAA	-16	NA	70453705	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497456_70497544_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.26	chr11	+	4984	33	NNC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.0728184716701	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCACCATTTTGAGATCC	1465	False	NA	NA	False	AATAAA	-15	NA	70453705	70505300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496879_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.28	chr11	+	5408	32	NNC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	-2	intron_retention	FALSE	canonical	1	3	junction_24	31.3775637812268	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	1466	False	NA	NA	False	AATAAA	-17	NA	70453706	70505302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497456_70497544_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70501010_70501091_70501230_70501426_70501536_70502141_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.29	chr11	+	6408	27	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_18	16.832273874524	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1466	False	NA	NA	False	AATAAA	-24	NA	70453706	70505309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70501010_70501091_70501230_70501426_70502304_70502411_70502556_70503062_70503198_70503306_70503893_70503980_70504121_70504454
ES.5333.3	chr11	+	5229	30	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-70	0	intron_retention	FALSE	canonical	2	4	junction_19	25.4112430293145	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1396	False	NA	NA	False	AATAAA	-24	NA	70453636	70505309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.30	chr11	+	4878	31	NNC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	29.7827131067672	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTGAGATCCTACTAT	1466	False	NA	NA	False	AATAAA	-21	NA	70453706	70505306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500102_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.31	chr11	+	5152	32	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	-3	intron_retention	FALSE	canonical	3	25	junction_20	22.82015831212	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1466	False	NA	NA	False	AATAAA	-16	NA	70453706	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.32	chr11	+	4922	32	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.8285926992602	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCACCATTTTGAGAT	1466	False	NA	NA	False	AATAAA	-13	NA	70453706	70505298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498642_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500102_70500379_70500544_70500903_70501008_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.34	chr11	+	5241	29	NIC	ENSMUSG00000020827.19	novel	3903	31	NA	NA	4	-3	intron_retention	FALSE	canonical	3	21	junction_17	20.5982897546453	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1470	False	NA	NA	False	AATAAA	-16	NA	70453710	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503893_70503980_70504121_70504454
ES.5333.35	chr11	+	4977	33	NNC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	27.0563647779963	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1476	False	NA	NA	False	AATAAA	-19	NA	70453716	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502141_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.38	chr11	+	4189	25	NNC	ENSMUSG00000020827.19	novel	3903	31	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.1602799545882	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1593	False	NA	NA	False	AATAAA	-16	NA	70453833	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488051_70492785_70492884_70494571_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.39	chr11	+	4563	30	NNC	ENSMUSG00000020827.19	novel	3903	31	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	30.2536246980783	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1597	False	NA	NA	False	AATAAA	-16	NA	70453837	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500903_70501010_70501091_70501230_70501426_70501536_70502132_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.40	chr11	+	4778	33	NNC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	890	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.4143552723751	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	2545	False	NA	NA	False	AATAAA	-19	NA	70454785	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70454817_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.41	chr11	+	4605	30	NNC	ENSMUSG00000020827.19	novel	3903	31	NA	NA	-1822	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_22	27.0434098561341	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	70487991	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502141_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.42	chr11	+	4594	29	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	24.2428981816304	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	70489824	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500092_70500374_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.44	chr11	+	4250	28	NNC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	767	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	35.9511938632369	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	NA	False	NA	NA	False	AATAAA	-19	NA	70493581	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497456_70497544_70497745_70497971_70498167_70498342_70498642_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.45	chr11	+	5320	16	NNC	ENSMUSG00000020827.19	novel	4865	32	NA	NA	772	0	intron_retention	FALSE	canonical	1	1	junction_7	27.2070252365491	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	NA	False	NA	NA	False	AATAAA	-19	NA	70495820	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499785_70499991_70501008_70501091_70501230_70501426_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.46	chr11	+	3706	20	NIC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	905	-3	intron_retention	FALSE	canonical	2	4	junction_10	27.7189096130873	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	70495953	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.48	chr11	+	4227	17	NIC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	81	-3	intron_retention	FALSE	canonical	3	62	junction_5	15.6843871413581	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	NA	False	NA	NA	False	AATAAA	-16	NA	70497607	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.5	chr11	+	4996	32	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_24	24.2858882985048	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1433	False	NA	NA	False	AATAAA	-19	NA	70453673	70505304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502141_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.50	chr11	+	3597	18	NNC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	-468	-7	intron_retention	FALSE	canonical	0	0	junction_11	33.0280367426322	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCACCATTTTGAGA	345	False	NA	NA	False	AATAAA	-12	NA	70498169	70505297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502397_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.51	chr11	+	3740	15	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-400	0	intron_retention	FALSE	canonical	2	4	junction_4	26.7207784317748	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAGATCCTACTATTG	413	False	NA	NA	False	AATAAA	-23	NA	70498237	70505308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70498342_70498582_70498847_70499166_70499785_70499991_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.52	chr11	+	2583	10	NIC	ENSMUSG00000020827.19	novel	4367	28	NA	NA	36	-6	intron_retention	FALSE	canonical	3	83	junction_2	9.20279077371051	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCACCATTTTGAGAT	2775	False	NA	NA	False	AATAAA	-13	NA	70500599	70505298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.53	chr11	+	1544	6	ISM	ENSMUSG00000020827.19	ENSMUST00000136663.8	4367	28	10237	8	2175	-3	3prime_fragment	FALSE	canonical	3	86	junction_2	10.9361784915939	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	5227	False	NA	NA	False	AATAAA	-16	NA	70503051	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.6	chr11	+	4893	31	FSM	ENSMUSG00000020827.19	ENSMUST00000102558.11	3903	31	-220	-770	-31	0	multi-exon	FALSE	canonical	3	21	junction_17	21.9476397111145	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAGATCCTACTATTG	1435	False	NA	NA	False	AATAAA	-23	NA	70453675	70505308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.7	chr11	+	5025	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	22.8920701335637	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAGATCCTACTATTG	1438	False	NA	NA	False	AATAAA	-23	NA	70453678	70505308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5333.9	chr11	+	6219	30	NNC	ENSMUSG00000020827.19	novel	4610	32	NA	NA	-22	-3	intron_retention	FALSE	canonical	1	1	junction_19	23.2551887757131	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACCATTTTGAGATCCT	1444	False	NA	NA	False	AATAAA	-16	NA	70453684	70505301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500544_70500726_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ES.5334.1	chr11	+	458	1	Intergenic	novelGene_4188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAAAACAC	7237	False	NA	NA	False	NA	NA	NA	70518332	70518790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70518300_70518800
ES.5335.1	chr11	+	223	1	Intergenic	novelGene_4189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGGTGAAGTAGGC	7895	False	NA	NA	False	ATTAAA	-14	NA	70518990	70519213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70519000_70519200
ES.5336.1	chr11	+	2048	1	Intergenic	novelGene_4190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACGAAAAAAAAAAAAA	5208	False	NA	NA	False	NA	NA	NA	70524837	70526885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70524800_70526900
ES.5337.1	chr11	+	3553	1	Genic_Genomic	ENSMUSG00000040746.16	novel	NA	NA	NA	NA	-418	35	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGACCAACCAACCACAA	8720	False	NA	NA	False	NA	NA	NA	70537642	70541195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_70537600_70541200
ES.5337.10	chr11	+	2939	8	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	485	junction_4	20.1190335305671	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9186	False	NA	21	True	AATAAA	-22	NA	70538108	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.11	chr11	+	1983	8	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-4	0	intron_retention	FALSE	canonical	3	525	junction_7	8.51649060616507	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9186	False	NA	30	True	AATAAA	-31	NA	70538108	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.12	chr11	+	2256	5	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	529	junction_2	3.57071421427143	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9187	False	NA	21	True	AATAAA	-22	NA	70538109	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540359_70540500_70541046_70541589
ES.5337.13	chr11	+	2862	3	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	32	intron_retention	FALSE	canonical	3	531	junction_1	3	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATGACCAACCAACCA	9190	False	NA	NA	False	NA	NA	NA	70538112	70541192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70540359_70540500
ES.5337.14	chr11	+	1916	8	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_5	175.751331750985	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9190	False	NA	19	True	AATAAA	-20	NA	70538112	70542236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538854_70538936_70540046_70540359_70540500_70540592_70540737_70540844_70540955_70541046_70541589_70541671_70541747
ES.5337.15	chr11	+	1900	8	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	1	9	1	0	intron_retention	FALSE	canonical	3	485	junction_5	20.0173394223863	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9191	False	NA	21	True	AATAAA	-22	NA	70538113	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
ES.5337.16	chr11	+	1632	9	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_8	227.85686296445	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAGGTTAAGATC	9191	False	NA	20	True	AATAAA	-21	NA	70538113	70542237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538854_70538936_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747_70541922_70541985
ES.5337.2	chr11	+	1905	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-72	0	-20	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9118	False	NA	30	True	AATAAA	-31	NA	70538040	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.20	chr11	+	2796	4	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	529	junction_2	3.39934634239519	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9191	False	NA	21	True	AATAAA	-22	NA	70538113	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540359_70540500
ES.5337.21	chr11	+	1697	8	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	1	0	intron_retention	FALSE	canonical	1	5	junction_2	183.665734531012	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9191	False	NA	21	True	AATAAA	-22	NA	70538113	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.22	chr11	+	1287	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	144.752662612241	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9191	False	NA	21	True	AATAAA	-22	NA	70538113	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538140_70538675_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.23	chr11	+	1487	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	167.544871454238	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9191	False	NA	19	True	AATAAA	-20	NA	70538113	70542236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538140_70538473_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.24	chr11	+	2017	10	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_2	216.219767029569	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9191	False	NA	30	True	AATAAA	-31	NA	70538113	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70539233_70539419_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.25	chr11	+	3085	7	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	525	junction_6	8.57159391374919	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9195	False	NA	30	True	AATAAA	-31	NA	70538117	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.26	chr11	+	1683	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	242.133469978751	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9199	False	NA	21	True	AATAAA	-22	NA	70538121	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538140_70538230_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541592_70541671_70541785
ES.5337.27	chr11	+	1859	9	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	10	0	intron_retention	FALSE	canonical	3	7	junction_5	175.320376382781	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9200	False	NA	21	True	AATAAA	-22	NA	70538122	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540692_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.28	chr11	+	1835	9	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	11	0	intron_retention	FALSE	canonical	1	5	junction_8	174.916006628896	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9201	False	NA	19	True	AATAAA	-20	NA	70538123	70542236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541723
ES.5337.29	chr11	+	2042	7	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	14	0	intron_retention	FALSE	canonical	3	529	junction_2	7.65397500213669	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9204	False	NA	30	True	AATAAA	-31	NA	70538126	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589
ES.5337.3	chr11	+	1818	9	NIC	ENSMUSG00000040746.16	novel	1957	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	55	junction_3	157.209205757805	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9144	False	NA	21	True	AATAAA	-22	NA	70538066	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.30	chr11	+	3739	4	ISM	ENSMUSG00000040746.16	ENSMUST00000151034.9	937	7	-774	-1299	14	969	intron_retention	FALSE	canonical	3	529	junction_1	8.2192186706253	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAGAAGGAAAAAAAAAA	9204	False	NA	NA	False	AATAGA	-6	NA	70538126	70543216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70538936_70540046_70540173_70540270_70540359_70540500
ES.5337.31	chr11	+	2584	6	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	16	0	intron_retention	FALSE	canonical	3	529	junction_2	8.35224520712844	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9206	False	NA	30	True	AATAAA	-31	NA	70538128	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951
ES.5337.32	chr11	+	2267	7	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-29	450	intron_retention	FALSE	canonical	3	529	junction_2	7.65397500213669	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	9429	False	NA	NA	False	NA	NA	NA	70538351	70542697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589
ES.5337.33	chr11	+	1587	9	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	172.34322586049	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9441	False	NA	21	True	AATAAA	-22	NA	70538363	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538840_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.34	chr11	+	2041	4	NIC	ENSMUSG00000040746.16	novel	1802	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	529	junction_1	3.77123616632825	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAAAAGGTTAAGAT	9476	False	NA	19	True	AATAAA	-20	NA	70538398	70542236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538936_70540046_70540359_70540500_70541046_70541589
ES.5337.35	chr11	+	1111	7	ISM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	289	1054	7	33	5prime_fragment	FALSE	canonical	3	485	junction_5	21.4508482090776	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACCAACCAACCAC	9479	False	NA	NA	False	NA	NA	NA	70538401	70541193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951
ES.5337.36	chr11	+	1477	8	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	184.02828087896	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9487	False	NA	21	True	AATAAA	-22	NA	70538409	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541716
ES.5337.4	chr11	+	1863	9	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_1	176.28864824486	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9144	False	NA	21	True	AATAAA	-22	NA	70538066	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538779_70538861_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.5	chr11	+	1786	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	154.113954952532	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9146	False	NA	30	True	AATAAA	-31	NA	70538068	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538140_70538230_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.6	chr11	+	2326	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	-43	-450	9	450	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	9147	False	NA	NA	False	NA	NA	NA	70538069	70542697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.7	chr11	+	2028	7	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	485	junction_4	20.0866179886566	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9170	False	NA	30	True	AATAAA	-31	NA	70538092	70542247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538779_70538854_70538936_70540046_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589
ES.5337.8	chr11	+	1410	10	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	157.860698085369	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9177	False	NA	21	True	AATAAA	-22	NA	70538099	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70538140_70538566_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5337.9	chr11	+	1583	10	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.544871454238	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTTAAGATCA	9179	False	NA	21	True	AATAAA	-22	NA	70538101	70542238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70538118_70538369_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ES.5338.1	chr11	+	859	1	Antisense	novelGene_ENSMUSG00000087523.2_AS_novelGene_ENSMUSG00000018293.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTAAGGTTGAGCAAGTT	4011	False	NA	NA	False	NA	NA	NA	70544925	70545784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70544900_70545800
ES.5338.10	chr11	+	3235	11	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1250	1	intron_retention	FALSE	canonical	0	0	junction_6	20.298768435548	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	5863	False	NA	11	True	AATAAA	-14	NA	70546777	70553337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551638_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.11	chr11	+	1466	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	-15	3	-15	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	7098	False	NA	10	True	AATAAA	-13	NA	70548012	70553336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.12	chr11	+	1459	12	NIC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	18.9020966085339	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGACCATGCTGTGTTCCT	7115	False	NA	8	True	AATAAA	-11	NA	70548029	70553334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70548106_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.2	chr11	+	5157	11	FSM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	-3694	-2	-3100	-1	multi-exon	FALSE	canonical	2	42	junction_3	10.4861813831347	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	4013	False	NA	12	True	AATAAA	-15	NA	70544927	70553338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.3	chr11	+	4100	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-3077	0	intron_retention	FALSE	canonical	1	4	junction_4	22.7319995084659	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	4036	False	NA	10	True	AATAAA	-13	NA	70544950	70553336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549333_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.4	chr11	+	1686	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-3074	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.392424183234	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACCATGCTGTGTT	4039	False	NA	5	True	AATAAA	-8	NA	70544953	70553331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70545260_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.5	chr11	+	2363	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1397	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	17.6985781751385	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	5716	False	NA	12	True	AATAAA	-15	NA	70546630	70553338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.6	chr11	+	1985	13	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.613909190781	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	5716	False	NA	10	True	AATAAA	-13	NA	70546630	70553336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70546896_70547271_70547607_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.7	chr11	+	4097	8	NIC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1370	1	intron_retention	FALSE	canonical	2	42	junction_3	12.2407816210354	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	5743	False	NA	11	True	AATAAA	-14	NA	70546657	70553337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549988_70551485_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.8	chr11	+	1575	12	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	-1320	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	16.078320705043	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGTGTTCCTTAGG	5793	False	NA	12	True	AATAAA	-15	NA	70546707	70553338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70546896_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5338.9	chr11	+	2875	11	NIC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	-1309	1	intron_retention	FALSE	canonical	2	23	junction_1	14.7854658364219	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	5804	False	NA	11	True	AATAAA	-14	NA	70546718	70553337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ES.5339.1	chr11	-	1851	8	NNC	ENSMUSG00000014606.15	novel	770	6	NA	NA	25	10325	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	253.252394875555	343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	70537779	70524696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70525668_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.10	chr11	-	1844	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	57	-190	-23	190	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	70537827	70534831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.11	chr11	-	2200	4	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	38	190	intron_retention	FALSE	canonical	3	711	junction_2	63.8766171789194	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	70537766	70534831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70537055_70537593
ES.5339.12	chr11	-	1890	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	11	190	intron_retention	FALSE	canonical	3	687	junction_4	57.3255808712151	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	70537793	70534831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.13	chr11	-	2935	1	Genic_Genomic	ENSMUSG00000014606.15	novel	NA	NA	NA	NA	38	190	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	70537766	70534831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_70534800_70537800
ES.5339.14	chr11	-	1661	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	47	3	-33	-3	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGTGTAAAGTCGTA	NA	False	NA	-3	True	ATTAAA	-25	NA	70537837	70535024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.17	chr11	-	1680	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	27	-4	intron_retention	FALSE	canonical	3	687	junction_4	57.3255808712151	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTGTGTAAAGTCGT	NA	False	NA	-4	True	ATTAAA	-24	NA	70537777	70535025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.18	chr11	-	1802	6	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	687	junction_3	59.8718631746165	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTGTGTAAAGTCGT	NA	False	NA	-4	True	ATTAAA	-24	NA	70537810	70535025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.19	chr11	-	1715	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	687	junction_5	61.6225067108872	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCTGTGTAAAGTCG	NA	False	NA	-5	True	ATTAAA	-23	NA	70537808	70535026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70537055_70537593
ES.5339.2	chr11	-	4371	1	Antisense	novelGene_ENSMUSG00000050675.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTCAAATTTATTATT	NA	False	NA	NA	False	AATAAA	-17	NA	70530366	70525995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_70526000_70530400
ES.5339.20	chr11	-	1549	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	34	128	34	-128	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAAATCTGGATAGTCT	NA	False	NA	-8	True	AATAAA	-17	NA	70537850	70535149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.21	chr11	-	1494	8	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-16	-129	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	264.241617942862	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70537741	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537110_70537593
ES.5339.22	chr11	-	1433	8	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-18	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	267.207173311997	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70537743	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536809_70536901_70537055_70537593
ES.5339.23	chr11	-	1580	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-20	-129	intron_retention	FALSE	canonical	3	17	junction_6	272.124001554847	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70538325	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538116
ES.5339.24	chr11	-	1500	8	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-20	-129	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	260.48878702022	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70538325	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538116
ES.5339.25	chr11	-	1359	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-27	-129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	280.56055001055	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70537752	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.26	chr11	-	1371	6	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-281	-129	intron_retention	FALSE	canonical	3	687	junction_4	41.5595957631929	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAAATCTGGATAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	70537017	70535150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901
ES.5339.27	chr11	-	1391	8	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	5	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	267.207173311997	313	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCAACCCCAAATCTG	NA	False	NA	-16	True	AATAAA	-9	NA	70537799	70535157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70537000_70537055_70537593
ES.5339.28	chr11	-	1244	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	76	391	-4	108	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGTGCTTGCCTGAT	NA	False	NA	5	True	NA	NA	NA	70537808	70535412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.29	chr11	-	1042	8	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-81	98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	266.289776179934	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGCCTGCCTGCTGTG	NA	False	NA	-5	True	NA	NA	NA	70538386	70535422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538363
ES.5339.3	chr11	-	1826	9	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-17	8144	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	251.006193897681	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	70537821	70526877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70527082_70535047_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.30	chr11	-	924	7	ISM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	81	823	1	212	5prime_fragment	FALSE	canonical	3	687	junction_4	38.1211519005161	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTGGGAGGGATGCGA	NA	False	NA	NA	False	AATACA	-32	NA	70537803	70535844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.4	chr11	-	180	1	Intergenic	novelGene_4191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	70527670	70527490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70527500_70527700
ES.5339.5	chr11	-	3796	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	76	-2161	-4	2161	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATAACATTGGTAGAA	NA	False	NA	NA	False	TTTAAA	-17	NA	70537808	70532860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.6	chr11	-	2881	9	NNC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	28	1715	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	251.006193897681	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTGGGAGAATCGAT	NA	False	NA	NA	False	ATTAAA	-23	NA	70537776	70533306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70534324_70534760_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.7	chr11	-	3306	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	116	-1711	36	1711	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCCTCACTGGGAGAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	70537768	70533310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.8	chr11	-	2595	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	124	-1008	-35	1008	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCCTCTGCCGCTACT	NA	False	NA	NA	False	AAAAAG	-17	NA	70537760	70534013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.5339.9	chr11	-	1894	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	-35	190	intron_retention	FALSE	canonical	3	687	junction_4	38.1211519005161	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	70537760	70534831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ES.534.1	chr1	-	156	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58749574	58749418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58749400_58749600
ES.5340.1	chr11	-	4464	4	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	1736	4249	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACAACAAAAAAACTTCC	NA	False	NA	NA	False	NA	NA	NA	70543688	70538426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70540357_70540498_70540843_70540954_70541044_70541587
ES.5340.10	chr11	-	1276	4	Fusion	ENSMUSG00000018293.5_ENSMUSG00000087523.2	novel	861	3	NA	NA	-283	-2	multi-exon	FALSE	canonical	0	0	junction_3	4652.0544565457	1649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGACCTGTGTTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70547602	70542677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70543048_70543612_70543806_70545174_70545404_70547118
ES.5340.11	chr11	-	823	3	FSM	ENSMUSG00000018293.5	ENSMUST00000178254.2	724	3	-12	-87	11	-2	multi-exon	FALSE	canonical	3	1190	junction_2	4423	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGACCTGTGTTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70545459	70542677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70543048_70543612_70543781_70545174
ES.5340.12	chr11	-	3333	2	ISM	ENSMUSG00000018293.5_ENSMUSG00000087523.2	ENSMUST00000018437.3	861	3	-1105	2	744	-2	intron_retention	FALSE	canonical	3	10036	junction_1	0	1649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGACCTGTGTTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70546575	70542677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70543048_70543612
ES.5340.13	chr11	-	811	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4846	1649	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGACCTGTGTTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70545430	70542677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70543048_70543620_70543806_70545174
ES.5340.14	chr11	-	655	2	FSM	ENSMUSG00000018293.5	ENSMUST00000108549.2	608	2	-36	-11	10	1	multi-exon	FALSE	canonical	3	9692	junction_1	0	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCCTTCTTGCTTTGAG	NA	False	NA	NA	False	ACTAAA	-17	NA	70545460	70543436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70543806_70545174
ES.5340.3	chr11	-	1420	2	FSM	ENSMUSG00000018293.5	ENSMUST00000108549.2	608	2	-35	-777	11	5	multi-exon	FALSE	canonical	3	9692	junction_1	0	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTGGTTTGCACTT	NA	False	NA	NA	False	AATAAA	-21	NA	70545459	70542670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70543806_70545174
ES.5340.5	chr11	-	916	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	553	1	at_least_one_novel_splicesite	FALSE	canonical	3	180	junction_2	4928	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCTGTGTTGGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	70544871	70542674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70543048_70543612_70543806_70544521
ES.5340.6	chr11	-	944	5	Fusion	ENSMUSG00000018293.5_ENSMUSG00000087523.2	novel	861	3	NA	NA	-444	1	multi-exon	FALSE	canonical	0	0	junction_3	4924.26955877722	1649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCTGTGTTGGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	70545914	70542674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70543048_70543612_70543806_70545174_70545404_70545623_70545723_70545864
ES.5340.7	chr11	-	2785	1	FSM	ENSMUSG00000018293.5	ENSMUST00000177669.2	1997	1	-25	-763	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1649	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCTGTGTTGGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	70545459	70542674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70542700_70545500
ES.5340.8	chr11	-	2522	3	Fusion	ENSMUSG00000018293.5_ENSMUSG00000087523.2	novel	861	3	NA	NA	-433	1	intron_retention	FALSE	canonical	3	37	junction_2	4999.5	1649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACCTGTGTTGGTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	70545903	70542674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70543048_70543612_70545723_70545864
ES.5340.9	chr11	-	1486	4	Fusion	ENSMUSG00000018293.5_ENSMUSG00000087523.2	novel	861	3	NA	NA	-769	-2	multi-exon	FALSE	canonical	3	37	junction_3	4634.62046869956	1649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGACCTGTGTTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70546239	70542677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70543048_70543612_70543806_70545174_70545723_70545864
ES.5341.1	chr11	+	517	1	Antisense	novelGene_ENSMUSG00000018287.13_AS_novelGene_ENSMUSG00000040712.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTATGTTACAGTTAT	NA	False	NA	NA	False	AATAGA	-12	NA	70559917	70560434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70559900_70560400
ES.5342.1	chr11	+	1129	1	Antisense	novelGene_ENSMUSG00000040712.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTGTGTGTGTATATA	NA	False	NA	NA	False	TTTAAA	-13	NA	70560890	70562019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70560900_70562000
ES.5343.1	chr11	-	5671	28	Fusion	ENSMUSG00000040712.17_ENSMUSG00000018287.13	novel	4632	23	NA	NA	-3	2	multi-exon	FALSE	canonical	3	17	junction_20	316.306930170798	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGATACTAGTCCAT	8374	False	NA	-7	True	AATAAA	-35	NA	70578784	70554594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.10	chr11	-	4463	22	NNC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	9.30388941661733	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGCCTCCGGCCTCTCT	8389	False	NA	-4	True	ATTAAA	-13	NA	70578769	70560292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565486_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574244_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.11	chr11	-	4249	21	NNC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.3962758580195	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGCCTCCGGCCTCTCT	8391	False	NA	-4	True	ATTAAA	-13	NA	70578767	70560292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562601_70562907_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.12	chr11	-	4656	20	NIC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	0	-1	intron_retention	FALSE	canonical	3	17	junction_12	5.24047744753437	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGCCTCCGGCCTCTCT	8389	False	NA	-4	True	ATTAAA	-13	NA	70578769	70560292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.13	chr11	-	4985	21	NIC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	17	junction_14	5.32353266168247	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGCCTCCGGCCTCTCT	8388	False	NA	-4	True	ATTAAA	-13	NA	70578770	70560292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.15	chr11	-	3660	15	NNC	ENSMUSG00000040712.17	novel	4411	17	NA	NA	1444	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.30324500126429	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTAGCCTCCGGCCTCT	NA	False	NA	-6	True	ATTAAA	-11	NA	70573158	70560294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573119
ES.5343.16	chr11	-	3992	21	FSM	ENSMUSG00000040712.17	ENSMUST00000108545.9	4377	21	15	370	15	-367	multi-exon	FALSE	canonical	2	2	junction_16	7.40877857679658	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGCCTTCGCTGCGCGC	8404	False	NA	NA	False	NA	NA	NA	70578754	70560658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.17	chr11	-	5154	8	NIC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	-9	7925	intron_retention	FALSE	canonical	3	17	junction_3	6.04067843196171	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACTAAAAAAAAAACCTAT	8218	False	NA	NA	False	NA	NA	NA	70578940	70568814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70574852_70574930_70576993_70577172_70577268_70578711
ES.5343.18	chr11	-	6499	1	NIC	ENSMUSG00000040712.17	novel	4406	21	NA	NA	-722	7914	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAATACTAAAA	NA	False	NA	NA	False	NA	NA	NA	70575324	70568825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70568800_70575300
ES.5343.2	chr11	-	3347	4	ISM	ENSMUSG00000018287.13	ENSMUST00000124691.2	772	5	1809	-552	1748	-17	3prime_fragment	FALSE	canonical	3	730	junction_2	46.1326589546085	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGACTTGTACCTGGA	NA	False	NA	-26	True	AATAAA	-16	NA	70558296	70554613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70555303_70555403_70555494_70555608_70555694_70555813
ES.5343.3	chr11	-	987	7	NIC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	-3	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	296.921239089127	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTGACTTGTACCTG	NA	False	NA	-28	True	AATAAA	-14	NA	70560119	70554615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555873_70556122_70556191_70560022
ES.5343.4	chr11	-	1338	4	NIC	ENSMUSG00000018287.13	novel	830	6	NA	NA	-4	-19	intron_retention	FALSE	canonical	3	730	junction_1	43.1225643434566	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTGACTTGTACCTG	NA	False	NA	-28	True	AATAAA	-14	NA	70560120	70554615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70555494_70555608_70555903_70556122_70556191_70560022
ES.5343.5	chr11	-	1056	7	NNC	ENSMUSG00000018287.13	novel	1159	7	NA	NA	0	-19	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	366.341825803898	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTGACTTGTACCTG	NA	False	NA	-28	True	AATAAA	-14	NA	70560116	70554615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556075_70556186_70560022
ES.5343.6	chr11	-	4409	21	FSM	ENSMUSG00000040712.17	ENSMUST00000108545.9	4377	21	-31	-1	-2	1	multi-exon	FALSE	canonical	2	2	junction_16	7.40877857679658	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCGGCCTCTCTCTGCT	8358	False	NA	1	True	ATTAAA	-18	NA	70578800	70560287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.7	chr11	-	4482	22	NNC	ENSMUSG00000040712.17	novel	4460	22	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.48906988887495	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTCCGGCCTCTCTCTG	8383	False	NA	-1	True	ATTAAA	-16	NA	70578775	70560289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70561089_70561171_70561247_70561374_70561591_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5343.8	chr11	-	4587	22	FSM	ENSMUSG00000040712.17	ENSMUST00000119120.2	4460	22	-127	0	23	0	multi-exon	FALSE	canonical	3	17	junction_14	5.19680697362221	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTCCGGCCTCTCTCTG	8250	False	NA	-1	True	ATTAAA	-16	NA	70578908	70560289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ES.5344.1	chr11	+	174	1	Intergenic	novelGene_4194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACTAGATATGGA	NA	False	NA	NA	False	NA	NA	NA	70588971	70589145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70589000_70589100
ES.5345.1	chr11	-	1066	7	FSM	ENSMUSG00000057054.12	ENSMUST00000108542.8	1080	7	5	9	5	-1	multi-exon	FALSE	canonical	1	2	junction_5	4.07226390762354	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTTTCTGTGCGAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	70590976	70579195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70586689_70586775_70590883
ES.5345.2	chr11	-	349	1	Intergenic	novelGene_4192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATTTTCATTGGT	5253	False	NA	NA	False	NA	NA	NA	70581905	70581556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70581600_70581900
ES.5345.3	chr11	-	176	1	Intergenic	novelGene_4193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5252	False	NA	NA	False	NA	NA	NA	70581906	70581730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70581700_70581900
ES.5346.1	chr11	+	4320	23	FSM	ENSMUSG00000020821.18	ENSMUST00000094499.11	5168	23	-47	895	-34	-895	multi-exon	FALSE	canonical	0	0	junction_1	1.80220250923627	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGCGCGTCATCCCACG	NA	False	NA	18	True	AGTAAA	-11	NA	70591339	70620318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70591536_70593197_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
ES.5347.1	chr11	-	225	1	Intergenic	novelGene_4195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTGTGGGAGGCTGAG	NA	False	NA	NA	False	AAGAAA	-30	NA	70629477	70629252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70629300_70629500
ES.5348.1	chr11	-	1030	4	NNC	ENSMUSG00000085502.2	novel	1182	4	NA	NA	-9002	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCTCATAACTTAATTA	1803	False	NA	NA	False	NA	NA	NA	70654979	70639530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70640170_70641136_70641272_70645779_70645905_70654848
ES.5349.1	chr11	+	2037	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	22	2	22	-2	multi-exon	FALSE	canonical	3	29	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTCCTCTGGCCTTTCC	944	False	NA	16	True	ATTAAA	-24	NA	70655056	70663752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70655376_70662034
ES.5349.2	chr11	+	5220	3	NNC	ENSMUSG00000043602.6	novel	2061	2	NA	NA	38	3343	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTCTTTTAAATGCT	960	False	NA	NA	False	NA	NA	NA	70655072	70667097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70655376_70662034_70663907_70664052
ES.5349.3	chr11	+	5179	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	225	-3343	225	3343	multi-exon	FALSE	canonical	3	29	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTCTTTTAAATGCT	95	False	NA	NA	False	NA	NA	NA	70655259	70667097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70655376_70662034
ES.5349.5	chr11	+	2891	1	NIC	ENSMUSG00000043602.6	novel	2061	2	NA	NA	262	-5567	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGGCTGGAAGTACAG	132	False	NA	NA	False	NA	NA	NA	70655296	70658187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70655300_70658200
ES.5349.6	chr11	+	3954	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	264	-2157	264	2157	multi-exon	FALSE	canonical	3	29	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAACCCTGTCTGAAAAA	134	False	NA	NA	False	AATAAA	-16	NA	70655298	70665911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70655376_70662034
ES.535.1	chr1	+	6704	11	NIC	ENSMUSG00000026031.16	novel	6572	10	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.552417469626	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTCTGATGTCTTTG	1265	False	NA	NA	False	ATTAAA	-14	NA	58750671	58798039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_58750752_58752729_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411_58771486_58774816_58774872_58779421_58779472_58780123_58780206_58791497_58792006_58792942
ES.535.2	chr1	+	1812	6	ISM	ENSMUSG00000026031.16	ENSMUST00000097722.9	1771	11	-38	20750	3	-1	5prime_fragment	FALSE	canonical	0	0	junction_1	1.54919333848297	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTTGTGCATTTGCTT	1265	False	NA	NA	False	NA	NA	NA	58750671	58772385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_58750752_58752729_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
ES.535.3	chr1	+	1901	6	NNC	ENSMUSG00000026031.16	novel	2010	5	NA	NA	72	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.54919333848297	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTTGTGCATTTGCTT	1384	False	NA	NA	False	NA	NA	NA	58750790	58772385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_58750960_58752729_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
ES.5350.1	chr11	+	179	1	Intergenic	novelGene_4196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTGTTTGCCA	4807	False	NA	NA	False	NA	NA	NA	70723754	70723933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70723800_70723900
ES.5351.1	chr11	+	4086	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-29	556	combination_of_known_junctions	TRUE	canonical	3	17	junction_9	40.6215383140521	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCCATAAATAGGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	70735574	70832685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.10	chr11	+	5211	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-22	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.3953234301687	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGAGTGTGTGGCCTT	NA	False	NA	11	True	ATTAAA	-12	NA	70735581	70833725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765582_70765701_70775592_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.11	chr11	+	5211	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-22	-203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	42.8852980510493	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGTGTGGCCTTTTC	NA	False	NA	14	True	ATTAAA	-15	NA	70735581	70833728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828424_70830696_70830823_70831207
ES.5351.12	chr11	+	3306	18	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-19	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	42.7818963749791	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGGCTGTTGATTGTA	NA	False	NA	10	True	ATTAAA	-20	NA	70735584	70831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799383_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.13	chr11	+	3996	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-19	1431	-19	371	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTGGTGTTGGCTTA	NA	False	NA	NA	False	AGTAAA	-20	NA	70735584	70832500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.15	chr11	+	5544	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-18	-118	-18	118	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGCCTTCAAGTTATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	70735585	70834049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.17	chr11	+	5120	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-18	-201	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTGTGGCCTTTTCCT	NA	False	NA	16	True	ATTAAA	-17	NA	70735585	70833730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.18	chr11	+	3627	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-17	1798	-17	4	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGTATAAATCTGCTTA	NA	False	NA	16	True	AATAAA	-25	NA	70735586	70832133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.19	chr11	+	3043	16	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-15	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	45.6336133422137	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCTGTTGATTGTATT	NA	False	NA	12	True	ATTAAA	-22	NA	70735588	70831773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.2	chr11	+	5236	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-25	197	-25	-197	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCCTTTTCCTTTGC	NA	False	NA	20	True	ATTAAA	-21	NA	70735578	70833734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.21	chr11	+	3641	17	ISM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-12	2164	-12	1	intron_retention	FALSE	canonical	3	115	junction_10	23.653422056861	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCCATTGGCTGTTGAT	NA	False	NA	6	True	ATTAAA	-16	NA	70735591	70831767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705
ES.5351.22	chr11	+	5052	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-11	-206	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	42.8383589788404	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGAGTGTGTGGCCTT	NA	False	NA	11	True	ATTAAA	-12	NA	70735592	70833725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.23	chr11	+	3101	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-11	2318	-11	141	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGTTTGGAATTACGT	NA	False	NA	NA	False	NA	NA	NA	70735592	70831613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.24	chr11	+	1013	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	-25	276	-11	-276	multi-exon	FALSE	canonical	3	143	junction_4	19.8179211826064	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGGCCTTTGGTTATTT	NA	False	NA	NA	False	AATGAA	-20	NA	70735592	70784671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ES.5351.25	chr11	+	5254	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	42.8383589788404	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTGAATAAATAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	70735592	70833927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.26	chr11	+	5435	19	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-11	21140	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	42.6868080353511	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAACTAGGAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	70735592	70855071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207_70833932_70855055
ES.5351.27	chr11	+	3996	17	ISM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-11	1808	-11	-1	intron_retention	FALSE	canonical	3	115	junction_10	23.653422056861	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTAGTACACATGTATA	NA	False	NA	6	True	AATAAA	-15	NA	70735592	70832123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705
ES.5351.28	chr11	+	1289	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	-24	-1	-10	1	multi-exon	FALSE	canonical	3	143	junction_4	19.8179211826064	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCCCTCCTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	70735593	70784948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ES.5351.29	chr11	+	4375	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-8	1041	-8	761	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGGACCCCAAGCTG	NA	False	NA	NA	False	ATTAAA	-42	NA	70735595	70832890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.3	chr11	+	4199	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-25	1234	-25	568	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTACTTTTATAATCAT	NA	False	NA	NA	False	AATAAA	-28	NA	70735578	70832697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.30	chr11	+	3509	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACACATGTATAAATCTG	NA	False	NA	12	True	AATAAA	-21	NA	70735595	70832129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.31	chr11	+	3259	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-8	2157	-8	8	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGTTGATTGTATTT	NA	False	NA	13	True	ATTAAA	-23	NA	70735595	70831774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.32	chr11	+	5147	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-7	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.0499026438743	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGAGTGTGTGGCCTTTT	NA	False	NA	13	True	ATTAAA	-14	NA	70735596	70833727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810044_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.33	chr11	+	3786	17	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-7	618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.8031373733663	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCTAAAAGCTTGCCAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	70735596	70832747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735636_70775707_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.34	chr11	+	3984	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-5	366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.6661603992593	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTGAGTGGTGTTG	NA	False	NA	NA	False	AGTAAA	-15	NA	70735598	70832495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765564_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.36	chr11	+	4212	17	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-4	710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.1596758851065	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATTAAAAGGATTATTA	NA	False	NA	NA	False	AATATA	-10	NA	70735599	70832839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799214_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.37	chr11	+	5390	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.8983569617889	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAATAAATAAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	70735599	70833930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795451_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.38	chr11	+	5156	19	NNC	ENSMUSG00000020817.17	novel	3167	19	NA	NA	-4	-206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	42.6868080353511	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGAGTGTGTGGCCTT	NA	False	NA	11	True	ATTAAA	-12	NA	70735599	70833725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207_70832683_70832732
ES.5351.39	chr11	+	2989	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-4	141	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTGTTTGGAATTACGT	NA	False	NA	NA	False	NA	NA	NA	70735599	70831613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.4	chr11	+	8487	15	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-24	-203	intron_retention	FALSE	canonical	3	115	junction_10	24.9726380877396	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGAGTGTGTGGCCTTTTC	NA	False	NA	14	True	ATTAAA	-15	NA	70735579	70833728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70828449_70830705
ES.5351.41	chr11	+	5276	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	44.0801826221262	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	70735603	70833931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.43	chr11	+	4190	18	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-3	556	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	42.7818963749791	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCCATAAATAGGTTAC	NA	False	NA	NA	False	AATAAA	-16	NA	70735614	70832685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799383_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.44	chr11	+	5467	19	FSM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	-135	-2165	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	54.1469194773709	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	70735615	70833931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70737264_70737336_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.45	chr11	+	3464	17	FSM	ENSMUSG00000020817.17	ENSMUST00000178245.2	2460	17	-185	-819	-2	-1	multi-exon	FALSE	canonical	3	4	junction_1	42.9708749474571	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTACACATGTATAAATCT	NA	False	NA	11	True	AATAAA	-20	NA	70735615	70832128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.47	chr11	+	4221	17	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	1	735	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.8095780293007	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGATTAAATTAGATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	70735625	70832864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765564_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.48	chr11	+	3572	18	NNC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.5634668659429	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAGTACACATGTATAAA	NA	False	NA	8	True	AATAAA	-17	NA	70735625	70832125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777838_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831213
ES.5351.49	chr11	+	3380	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	22	2006	1	159	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGGCTGAGGCCATA	NA	False	NA	NA	False	ATTAAA	-16	NA	70735625	70831925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.5	chr11	+	2537	1	Genic_Genomic	ENSMUSG00000020817.17	novel	NA	NA	NA	NA	-24	-46831	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTTTGTGTATAATTGG	NA	False	NA	NA	False	NA	NA	NA	70735579	70738116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_70735600_70738100
ES.5351.50	chr11	+	3784	16	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	1	565	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43.9658453297051	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTTACTTTTATAAT	NA	False	NA	NA	False	AATAAA	-25	NA	70735625	70832694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.51	chr11	+	3855	16	NNC	ENSMUSG00000020817.17	novel	3860	16	NA	NA	1	-2	intron_retention	FALSE	canonical	1	2	junction_2	55.0716704748357	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCTAGTACACATGTAT	NA	False	NA	5	True	AATAAA	-14	NA	70735625	70832122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70735835_70765571_70765701_70775592_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705
ES.5351.52	chr11	+	5249	17	FSM	ENSMUSG00000020817.17	ENSMUST00000178245.2	2460	17	-171	-2618	5	-4	multi-exon	FALSE	canonical	3	4	junction_1	42.9708749474571	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTTGAATAAATAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	70735629	70833927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.54	chr11	+	3633	15	NIC	ENSMUSG00000020817.17	novel	2460	17	NA	NA	12	554	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.0193269154301	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTACCCCATAAATAGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70735636	70832683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.55	chr11	+	3740	12	ISM	ENSMUSG00000020817.17	ENSMUST00000108533.10	2791	18	-69	15651	-52	-15488	5prime_fragment	FALSE	canonical	3	115	junction_10	24.6408919018571	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGCAGAGACAAGGGAC	NA	False	NA	NA	False	NA	NA	NA	70735698	70815821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968
ES.5351.56	chr11	+	3767	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-48	365	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTGTGAGTGGTGTT	NA	False	NA	NA	False	AGTAAA	-14	NA	70735702	70832494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.57	chr11	+	4845	16	ISM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	39986	204	39789	-204	3prime_fragment	FALSE	canonical	3	115	junction_8	22.8982289465559	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGAGTGTGTGGCCTTTT	NA	False	NA	13	True	ATTAAA	-14	NA	70775589	70833727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.58	chr11	+	1884	3	ISM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	39972	-965	39789	965	3prime_fragment	FALSE	canonical	3	143	junction_2	25	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGATTGTAAGAAATGA	NA	False	NA	NA	False	AATAGA	-33	NA	70775589	70785912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70775795_70777836_70777998_70784394
ES.5351.59	chr11	+	4821	16	NNC	ENSMUSG00000020817.17	novel	2460	17	NA	NA	39793	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.1057498564432	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGAGTGTGTGGCCTT	NA	False	NA	11	True	ATTAAA	-12	NA	70775593	70833725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70775795_70777836_70777998_70784394_70784518_70791297_70791434_70795451_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.6	chr11	+	5326	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	-24	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAATAAATAAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	70735579	70833930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.60	chr11	+	3207	14	NNC	ENSMUSG00000020817.17	novel	2460	17	NA	NA	48630	368	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_13	44.6584672623776	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGAGTGGTGTTGGC	NA	False	NA	NA	False	AGTAAA	-17	NA	70784430	70832497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831213
ES.5351.61	chr11	+	4255	12	NIC	ENSMUSG00000020817.17	novel	2469	17	NA	NA	55495	-205	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	44.6619996739514	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGAGTGTGTGGCCTTT	NA	False	NA	12	True	ATTAAA	-13	NA	70791295	70833726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.62	chr11	+	4168	12	NNC	ENSMUSG00000020817.17	novel	2469	17	NA	NA	59686	-202	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	48.9207488640708	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGTGGCCTTTTCC	NA	False	NA	15	True	ATTAAA	-16	NA	70795486	70833729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830828_70831213
ES.5351.63	chr11	+	784	3	ISM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	92595	-5	92545	5	3prime_fragment	FALSE	canonical	3	165	junction_2	11.5	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGGCTGTTGATTGTA	NA	False	NA	10	True	ATTAAA	-20	NA	70828345	70831771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70828449_70830705_70830823_70831207
ES.5351.64	chr11	+	2943	3	ISM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	92742	1	92545	-1	3prime_fragment	FALSE	canonical	3	165	junction_2	11.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAATAAATAAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	70828345	70833930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_70828449_70830705_70830823_70831207
ES.5351.7	chr11	+	5302	19	FSM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	-170	-1965	-23	-200	multi-exon	FALSE	canonical	0	0	junction_1	54.1469194773709	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGTGGCCTTTTCCTT	NA	False	NA	17	True	ATTAAA	-18	NA	70735580	70833731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70737264_70737336_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.8	chr11	+	5431	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-23	0	-23	0	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	70735580	70833931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5351.9	chr11	+	4711	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	-22	719	-22	-719	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCAGTTTTCTGCATG	NA	False	NA	NA	False	AATAAA	-40	NA	70735581	70833212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ES.5352.1	chr11	-	182	1	Intergenic	novelGene_4197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAACAGGAACT	NA	False	NA	NA	False	NA	NA	NA	70740389	70740207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70740200_70740400
ES.5353.1	chr11	-	162	1	Intergenic	novelGene_4198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATCAACAGATAAAAATT	6199	False	NA	NA	False	NA	NA	NA	70748965	70748803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70748800_70749000
ES.5354.1	chr11	-	1030	1	Antisense	novelGene_ENSMUSG00000020817.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70816983	70815953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_70816000_70817000
ES.5355.1	chr11	-	7660	4	Antisense	novelGene_ENSMUSG00000020817.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTGGGCAGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	70831176	70818386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_70825418_70825949_70826007_70828347_70828447_70830703
ES.5356.1	chr11	-	2481	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-51	-41	-32	-3	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAGTCTATGGGTTGG	NA	False	NA	12	True	AATAAA	-42	NA	70860831	70833886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.10	chr11	-	2775	15	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_9	74.1306073007331	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.11	chr11	-	5281	1	NIC	ENSMUSG00000040667.12	novel	3000	13	NA	NA	458	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70839183	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70833900_70839200
ES.5356.12	chr11	-	3551	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	226.137264730959	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860783	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70839837_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.13	chr11	-	4404	16	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_7	214.132420089377	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.14	chr11	-	3023	16	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	1992	0	intron_retention	FALSE	canonical	0	0	junction_11	365.304597410009	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70858714	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70836188_70838527_70838630_70839837_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70848088_70848264_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ES.5356.16	chr11	-	5466	12	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_6	73.7173516472499	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70836188_70838527_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.18	chr11	-	3150	15	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-1	intron_retention	FALSE	canonical	1	8	junction_6	294.256560622508	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGACTTTGCTTTACAAT	NA	False	NA	-5	True	AATAAA	-43	NA	70860799	70833903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.2	chr11	-	2502	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	-50	1	-50	-1	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGCTTTACAATTAAAG	NA	False	NA	0	True	AATAAA	-30	NA	70860849	70833898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.20	chr11	-	2435	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	224.903442823248	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860790	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856675_70858673_70858844_70860474
ES.5356.21	chr11	-	2376	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	285.37428821637	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860759	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836185_70838527_70838630_70840971_70841054_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.22	chr11	-	2660	16	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_10	72.5416661880146	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860799	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.24	chr11	-	7073	13	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-22	0	intron_retention	FALSE	canonical	3	678	junction_8	79.6674947655706	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860821	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70856659_70858673_70858844_70860474
ES.5356.26	chr11	-	3417	13	NNC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	390	0	intron_retention	FALSE	canonical	0	0	junction_12	236.873545143583	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860316	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70859693
ES.5356.27	chr11	-	2546	16	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	352	junction_5	137.017500909758	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860792	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.28	chr11	-	2467	16	NNC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	232.291158295408	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860783	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856604_70858673_70858844_70860474
ES.5356.29	chr11	-	4509	9	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-1527	0	intron_retention	FALSE	canonical	3	678	junction_7	84.2324722123244	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70849266	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091
ES.5356.3	chr11	-	3256	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	8	junction_8	285.847615653865	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGCTTTACAATTAAAG	NA	False	NA	0	True	AATAAA	-30	NA	70860792	70833898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.30	chr11	-	3938	13	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-1898	0	intron_retention	FALSE	canonical	3	409	junction_5	132.942238919348	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70854515	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407
ES.5356.31	chr11	-	3973	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	223.545288686096	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860787	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70860167_70860240
ES.5356.32	chr11	-	4239	11	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-1861	0	intron_retention	FALSE	canonical	3	678	junction_8	80.4972670343534	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70854478	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407
ES.5356.33	chr11	-	2750	15	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	678	junction_9	74.6027575131873	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860783	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.36	chr11	-	2493	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	232.168976380889	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860785	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835243_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.37	chr11	-	2422	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	232.431172608151	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860787	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838636_70840986_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.38	chr11	-	4207	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	328.085539293871	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860783	70833907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845471_70846961_70847149_70849091_70849266_70852407_70852502_70852720_70852882_70856532_70856659_70858673
ES.5356.4	chr11	-	2388	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	225.108272560117	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGCTTTACAATTAAAG	NA	False	NA	0	True	AATAAA	-30	NA	70860783	70833898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856626_70858673_70858844_70860474
ES.5356.45	chr11	-	2425	17	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	224.507368684749	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAAAATTTGACTTTG	NA	False	NA	-14	True	AATAAA	-34	NA	70860783	70833912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835407_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.47	chr11	-	2908	16	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	236.683717695625	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAATAAATTTTTATTC	NA	False	NA	-29	True	AATAAA	-19	NA	70860783	70833927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856604_70858673_70858844_70860474
ES.5356.48	chr11	-	2348	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_3	223.90091802793	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTTTGAATAAATTTT	NA	False	NA	-34	True	AATAAA	-14	NA	70860783	70833932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835011_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.49	chr11	-	4032	16	ISM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	15	37	1	-7	intron_retention	FALSE	canonical	3	352	junction_6	133.783240936806	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860784	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ES.5356.51	chr11	-	4259	15	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	-5	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	219.912459392183	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860793	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835566_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ES.5356.52	chr11	-	2333	17	NNC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_3	218.067614227789	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860785	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835011_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.53	chr11	-	2417	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	225.216553773807	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860787	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834837_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.54	chr11	-	4306	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-7	intron_retention	FALSE	canonical	1	8	junction_9	287.292255105755	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860788	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ES.5356.55	chr11	-	1853	5	NNC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-625	-7	intron_retention	FALSE	canonical	1	9	junction_4	384.047197620292	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70840266	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70836188_70838527_70838630_70840098
ES.5356.57	chr11	-	2887	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	-7	intron_retention	FALSE	canonical	1	8	junction_8	277.537152636814	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860783	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.58	chr11	-	3083	13	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	678	junction_7	79.5083416308559	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860790	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.59	chr11	-	2410	17	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	232.556310385248	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGTTTGAATAAATT	NA	False	NA	32	True	AATAAA	-12	NA	70860799	70833934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835383_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.6	chr11	-	2982	16	NIC	ENSMUSG00000040667.12	novel	2389	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	409	junction_5	124.646950312562	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860792	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.60	chr11	-	3399	13	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_7	238.95112238466	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAGTTTGAATAAA	NA	False	NA	30	True	AATAAA	-10	NA	70860799	70833936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834824_70834937_70835065_70835307_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845471_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.61	chr11	-	3630	12	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	2	-9	intron_retention	FALSE	canonical	3	678	junction_6	82.8793806416119	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAAGTTTGAATAAA	NA	False	NA	30	True	AATAAA	-10	NA	70860783	70833936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834824_70834937_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.62	chr11	-	8356	14	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	149	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	227.891389058693	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGTGTGGTTATTCTT	NA	False	NA	-36	True	TATAAA	-17	NA	70860557	70834002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70854167_70856144_70856659_70858673
ES.5356.63	chr11	-	2325	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-12	76	-4	-2	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGTGTGGTTATTCT	NA	False	NA	-37	True	TATAAA	-16	NA	70860792	70834003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.64	chr11	-	2664	15	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	678	junction_9	62.246752230661	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGTGTGGTTATTCT	NA	False	NA	-37	True	TATAAA	-16	NA	70860785	70834003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.65	chr11	-	2602	18	NNC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_9	283.088796026947	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGTGTGGTTATTC	NA	False	NA	-38	True	TATAAA	-15	NA	70860785	70834004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.66	chr11	-	2339	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	7	107	-4	-3	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGTGTGGTTATTC	NA	False	NA	-38	True	TATAAA	-15	NA	70860792	70834004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.67	chr11	-	1489	1	NIC	ENSMUSG00000040667.12	novel	3000	13	NA	NA	70	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGTGTGGTTATTC	NA	False	NA	-38	True	TATAAA	-15	NA	70835493	70834004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834000_70835500
ES.5356.68	chr11	-	2901	14	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	1	-3	intron_retention	FALSE	canonical	3	678	junction_8	76.7679204451147	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGTGTGGTTATTC	NA	False	NA	-38	True	TATAAA	-15	NA	70860784	70834004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.69	chr11	-	2926	16	NNC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	2	-4	intron_retention	FALSE	canonical	1	8	junction_7	286.323406890414	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTTGGTGTGGTTATT	NA	False	NA	-39	True	TATAAA	-14	NA	70860783	70834005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70836188_70838527_70838630_70840098_70840369_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.7	chr11	-	2988	16	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	352	junction_5	136.473424356376	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860783	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.70	chr11	-	3265	10	ISM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-5	2830	0	-1249	5prime_fragment	FALSE	canonical	3	678	junction_4	72.1204411016139	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTTATCTGGGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	70860785	70836757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.71	chr11	-	1976	9	FSM	ENSMUSG00000040667.12	ENSMUST00000138634.8	1976	9	4	-4	2	4	multi-exon	FALSE	canonical	3	678	junction_3	66.9976678698595	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTGATTCTGACAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	70860783	70840386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.8	chr11	-	2865	14	NIC	ENSMUSG00000040667.12	novel	2450	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	678	junction_8	76.514298466512	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860783	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ES.5356.9	chr11	-	4052	16	ISM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	-7	-25	0	0	intron_retention	FALSE	canonical	3	409	junction_6	121.828768724341	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860787	70833902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673
ES.5357.1	chr11	+	4504	4	FSM	ENSMUSG00000018449.13	ENSMUST00000126815.8	434	4	-303	-3767	-36	96	multi-exon	FALSE	canonical	3	39	junction_3	145.669336359975	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAGGAATAGCGAATG	NA	False	NA	141	True	AATAAA	-19	NA	70861002	70868755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894
ES.5357.10	chr11	+	1555	6	NIC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	4	2	intron_retention	FALSE	canonical	3	224	junction_4	52.6748516846512	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861320	70868629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70865867_70868483
ES.5357.11	chr11	+	1560	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	4	87	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAGCCCAAAGGAA	NA	False	NA	132	True	AATAAA	-10	NA	70861320	70868746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
ES.5357.12	chr11	+	5074	3	FSM	ENSMUSG00000018449.13	ENSMUST00000129531.8	745	3	6	-4335	6	-7	multi-exon	FALSE	canonical	3	311	junction_2	32	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACCTCAACTTTCCT	NA	False	NA	38	True	ATTAAA	-39	NA	70861322	70868652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589_70862761_70863840
ES.5357.13	chr11	+	1438	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTCTGATGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	70861327	70868631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
ES.5357.14	chr11	+	842	7	NNC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	114.584393934485	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTTGGTGTTCTGAT	NA	False	NA	12	True	ATTAAA	-13	NA	70861329	70868626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865933_70868483
ES.5357.15	chr11	+	769	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	301	30	7	2	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTGTTCTGATGTG	NA	False	NA	15	True	ATTAAA	-16	NA	70861339	70868629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ES.5357.16	chr11	+	268	3	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	216	-1	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	8	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTTCTGATGTGG	NA	False	NA	16	True	ATTAAA	-17	NA	70863844	70868630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70863902_70864894_70864959_70868483
ES.5357.2	chr11	+	1203	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	-18	-85	-18	85	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAAGCCCAAAGG	NA	False	NA	130	True	AATAAA	-8	NA	70861020	70868744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ES.5357.3	chr11	+	720	6	FSM	ENSMUSG00000018449.13	ENSMUST00000171254.8	548	6	-32	-140	-5	-6	multi-exon	FALSE	canonical	3	39	junction_3	115.373480488369	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTCAACTTTCCTG	NA	False	NA	39	True	ATTAAA	-40	NA	70861300	70868653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70865725_70865867_70868483
ES.5357.4	chr11	+	1058	7	NNC	ENSMUSG00000018449.13	novel	1100	7	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	117.814472795154	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTCAACTTTCCTG	NA	False	NA	39	True	ATTAAA	-40	NA	70861300	70868653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865499_70865867_70868483
ES.5357.5	chr11	+	6176	2	FSM	ENSMUSG00000018449.13	ENSMUST00000136665.2	688	2	-10	-5478	-4	-6	multi-exon	FALSE	canonical	3	375	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTCAACTTTCCTG	NA	False	NA	39	True	ATTAAA	-40	NA	70861301	70868653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70861414_70862589
ES.5357.6	chr11	+	5270	4	NIC	ENSMUSG00000018449.13	novel	764	5	NA	NA	-4	1	intron_retention	FALSE	canonical	3	224	junction_3	66.2537210695034	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGGTGTTCTGATGT	NA	False	NA	14	True	ATTAAA	-15	NA	70861301	70868628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70863902_70864627_70864740_70864894
ES.5357.7	chr11	+	3558	3	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	300	junction_2	37.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTCAACTTTCCTGGAG	NA	False	NA	42	True	ATTAAA	-43	NA	70861305	70868656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70865867_70868483
ES.5357.8	chr11	+	5148	3	NIC	ENSMUSG00000018449.13	novel	764	5	NA	NA	2	-3	intron_retention	FALSE	canonical	3	39	junction_2	168	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTCTTGGTGTTCTG	NA	False	NA	10	True	ATTAAA	-11	NA	70861307	70868624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70863902_70864894
ES.5357.9	chr11	+	2449	4	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	3	-1	intron_retention	FALSE	canonical	3	300	junction_3	33.0689515339624	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTTCTGATGTGG	NA	False	NA	16	True	ATTAAA	-17	NA	70861308	70868630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70861414_70862589_70862761_70863840_70865867_70868483
ES.5358.1	chr11	+	167	1	Antisense	novelGene_ENSMUSG00000018446.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCCATTTTATCAAAG	3040	False	NA	NA	False	AAAACA	-16	NA	70872705	70872872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_70872700_70872900
ES.5359.1	chr11	-	4962	1	Genic_Genomic	ENSMUSG00000018446.9	novel	NA	NA	NA	NA	-1231	2695	mono-exon	FALSE	NA	NA	NA	NA	NA	894	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTAAACATCTCCCTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70870928	70865966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_70866000_70870900
ES.5359.10	chr11	-	1003	7	NNC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	40	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1954.26991198475	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCTCCAGGAAAGTT	NA	False	NA	28	True	AATAAA	-10	NA	70873793	70868683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70868764_70868854_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ES.5359.11	chr11	-	1122	6	NNC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	6	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2084.7528390675	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCTCCAGGAAAGTT	NA	False	NA	28	True	AATAAA	-10	NA	70873827	70868683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70869065_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ES.5359.2	chr11	-	1195	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	-5	-15	-5	15	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGAACACCAAGAGCAGA	NA	False	NA	-11	True	AATAAA	-32	NA	70873857	70868646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ES.5359.3	chr11	-	1104	6	NNC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2103.38831412557	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGTTGAGGTTCTTTC	NA	False	NA	-37	True	AATAAA	-21	NA	70873778	70868672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70869071_70869253_70869387_70869510_70869611_70870835_70870930_70872995_70873147_70873550
ES.5359.4	chr11	-	1035	5	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	2231.85326578608	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAAAGTTGAGGTTCTT	NA	False	NA	37	True	AATAAA	-19	NA	70873848	70868674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70869071_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ES.5359.6	chr11	-	2666	3	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	14	-10	intron_retention	FALSE	canonical	3	4814	junction_1	235	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCTCCAGGAAAGTT	NA	False	NA	28	True	AATAAA	-10	NA	70873819	70868683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70870930_70872995_70873147_70873550
ES.5359.7	chr11	-	1442	4	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	13	-10	intron_retention	FALSE	canonical	3	4814	junction_2	278.773504240749	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATCTCCAGGAAAGTT	NA	False	NA	28	True	AATAAA	-10	NA	70873820	70868683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70869611_70870835_70870930_70872995_70873147_70873550
ES.536.1	chr1	-	5786	2	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGGCCTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	58808102	58801128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58806855_58808042
ES.536.2	chr1	-	7150	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGGCCTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	58808278	58801128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58801100_58808300
ES.536.3	chr1	-	5965	2	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAATTTGTCTTGGC	NA	False	NA	NA	False	NA	NA	NA	58808279	58801137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58806866_58808042
ES.536.4	chr1	-	182	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAACAAA	2155	False	NA	NA	False	NA	NA	NA	58802632	58802450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58802400_58802600
ES.536.5	chr1	-	4198	2	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGTTCAGGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	58808280	58802905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58806866_58808042
ES.536.6	chr1	-	717	2	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	58808271	58806366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58806855_58808042
ES.536.7	chr1	-	737	2	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	58808277	58806366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_58806869_58808042
ES.5360.1	chr11	+	172	1	Intergenic	novelGene_4199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTGTTTACCTCTA	4151	False	NA	NA	False	NA	NA	NA	70888964	70889136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_70889000_70889100
ES.5361.1	chr11	+	3537	3	NNC	ENSMUSG00000040599.14	novel	3003	3	NA	NA	-175	3	intron_retention	FALSE	canonical	2	6	junction_1	59	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATTATTGCTTAATATA	NA	False	NA	19	True	AATAAA	-40	NA	70910261	70918200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_70911372_70915375_70915538_70915935
ES.5361.2	chr11	+	3157	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	-154	0	-154	0	multi-exon	FALSE	canonical	3	76	junction_1	24	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910282	70918197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70911016_70915375_70915538_70915935
ES.5361.3	chr11	+	2571	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	-44	-2183	-44	-10	multi-exon	FALSE	canonical	3	36	junction_1	44	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATTTATGTATT	NA	False	NA	6	True	AATAAA	-27	NA	70910392	70918187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70910550_70915375_70915538_70915935
ES.5361.4	chr11	+	2364	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	-34	-1986	-34	-207	multi-exon	FALSE	canonical	3	36	junction_1	44	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTTTATACTTTGATT	NA	False	NA	NA	False	CATAAA	-41	NA	70910402	70917990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70910550_70915375_70915538_70915935
ES.5361.5	chr11	+	7387	2	NIC	ENSMUSG00000040599.14	novel	3003	3	NA	NA	-34	-10	intron_retention	FALSE	canonical	3	124	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATTTATGTATT	NA	False	NA	6	True	AATAAA	-27	NA	70910402	70918187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_70915538_70915935
ES.5361.6	chr11	+	2754	4	FSM	ENSMUSG00000040599.14	ENSMUST00000164220.8	1416	4	-26	-1312	-26	7	multi-exon	FALSE	canonical	3	11	junction_1	46.3057471835	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGCTTAATATATAGG	NA	False	NA	23	True	AATAAA	-44	NA	70910410	70918204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_70910550_70910831_70911016_70915375_70915538_70915935
ES.5362.1	chr11	-	6092	11	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-89	0	intron_retention	FALSE	canonical	0	0	junction_5	35.296033771516	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGTATCCAGCATTTA	NA	False	NA	2	True	ATTAAA	-30	NA	70895352	70874916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70884525_70884682_70884839_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.10	chr11	-	5591	18	Fusion	ENSMUSG00000018442.14_ENSMUSG00000040620.16	novel	5184	12	NA	NA	0	-5	multi-exon	FALSE	canonical	0	0	junction_11	222.119983786313	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTCTTGGTATCCAGC	NA	False	NA	-3	True	ATTAAA	-25	NA	70910101	70874921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70901172_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.11	chr11	-	5435	13	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.3783323358237	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGTCTTGGTATCCAGC	NA	False	NA	-3	True	ATTAAA	-25	NA	70895275	70874921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70880528_70880773_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.12	chr11	-	5258	11	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-93	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	34.7167106736799	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATAAGTCTTGGTATCC	NA	False	NA	-6	True	ATTAAA	-22	NA	70895356	70874924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70886612_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.13	chr11	-	5302	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-26	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	32.8673768775349	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGATAAGTCTTGGTATC	NA	False	NA	-7	True	ATTAAA	-21	NA	70895289	70874925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886612_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.14	chr11	-	7060	10	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-66	-10	intron_retention	FALSE	non_canonical	0	0	junction_3	48.0927601645706	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCGATAAGTCTTGGTAT	NA	False	NA	-8	True	ATTAAA	-20	NA	70895329	70874926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883064_70883178_70883442_70884435_70884525_70884682_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.16	chr11	-	5031	11	FSM	ENSMUSG00000040620.16	ENSMUST00000049048.13	2266	11	-116	-2649	-19	-11	multi-exon	FALSE	canonical	0	0	junction_10	34.7643495552556	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCGATAAGTCTTGGTA	NA	False	NA	-9	True	ATTAAA	-19	NA	70895282	70874927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70894942
ES.5362.17	chr11	-	5321	13	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-15	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	42.0260335982353	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTCGATAAGTCTTGG	NA	False	NA	-11	True	ATTAAA	-17	NA	70895278	70874929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70891700_70891836_70892344_70892506_70894942
ES.5362.19	chr11	-	5521	9	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-14	-97	intron_retention	FALSE	canonical	0	0	junction_3	38.9743505398102	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGTGTGGCCTCTTTT	NA	False	NA	-26	True	CATAAA	-18	NA	70895277	70875013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70884682_70884843_70885964_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.2	chr11	-	5283	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-99	0	-99	0	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGTATCCAGCATTTA	NA	False	NA	2	True	ATTAAA	-30	NA	70895362	70874916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.21	chr11	-	5739	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	14	-99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.9173720822499	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATCTGTGTGGCCTCTT	NA	False	NA	-28	True	CATAAA	-16	NA	70895232	70875015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890505_70890775_70891700_70892506_70894942
ES.5362.23	chr11	-	5166	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-21	-100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.5540891040778	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGATCTGTGTGGCCTCT	NA	False	NA	-29	True	CATAAA	-15	NA	70895284	70875016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883064_70883178_70883442_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.24	chr11	-	5225	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-142	101	-142	-101	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGATCTGTGTGGCCTC	NA	False	NA	-30	True	CATAAA	-14	NA	70895405	70875017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.25	chr11	-	3297	2	ISM	ENSMUSG00000040620.16	ENSMUST00000146203.8	1422	5	2530	5	2530	-5	3prime_fragment	FALSE	canonical	3	109	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTTCCAGAGTAAGGT	NA	False	NA	-19	True	ATTAAA	-15	NA	70882276	70877340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70878254_70879892
ES.5362.26	chr11	-	3908	11	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-26	-5	intron_retention	FALSE	canonical	3	85	junction_6	12.9880714503732	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGTTCCAGAGTAAGGT	NA	False	NA	-19	True	ATTAAA	-15	NA	70895289	70877340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.27	chr11	-	2817	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-59	2426	-59	-7	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAGTTCCAGAGTAAG	NA	False	NA	-21	True	ATTAAA	-13	NA	70895322	70877342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.28	chr11	-	2040	11	ISM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	-92	4875	-92	-2215	5prime_fragment	FALSE	canonical	3	85	junction_6	13.6400146627487	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAGAATATAAAA	NA	False	NA	NA	False	AAAACA	-23	NA	70895355	70879791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.29	chr11	-	3035	10	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	18	-2215	intron_retention	FALSE	canonical	3	85	junction_5	13.6905843105922	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAGAATATAAAA	NA	False	NA	NA	False	AAAACA	-23	NA	70895228	70879791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.3	chr11	-	7798	9	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-34	-2	intron_retention	FALSE	canonical	3	97	junction_3	9.87420882906575	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGGTATCCAGCATT	NA	False	NA	0	True	ATTAAA	-28	NA	70895297	70874918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70884525_70884682_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.30	chr11	-	181	1	Intergenic	novelGene_4200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	70896453	70896272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70896300_70896500
ES.5362.31	chr11	-	2075	8	NNC	ENSMUSG00000018442.14	novel	884	8	NA	NA	-1	1076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	253.6965888294	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGGGGTGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	70910096	70896913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70898174_70901172_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909882
ES.5362.32	chr11	-	3714	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	-45	-3	-45	3	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTGTATTTTTAATTA	NA	False	NA	0	True	NA	NA	NA	70910174	70898264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.33	chr11	-	3844	7	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	209.920619917784	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTTGTATTTTTAATT	NA	False	NA	-1	True	NA	NA	NA	70910096	70898265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909413_70909969
ES.5362.34	chr11	-	7065	5	ISM	ENSMUSG00000018442.14	ENSMUST00000132198.8	676	6	22	-5680	-10	0	intron_retention	FALSE	canonical	3	526	junction_3	30.5317457738663	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910079	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137
ES.5362.35	chr11	-	7200	5	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	526	junction_2	29.3033701133504	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910069	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70904027_70904268_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.36	chr11	-	9049	3	FSM	ENSMUSG00000018442.14	ENSMUST00000140712.2	4369	3	0	-4680	0	0	multi-exon	FALSE	canonical	3	539	junction_2	32	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910069	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70904027_70904268_70906627_70909137
ES.5362.37	chr11	-	3550	6	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	224.774197807489	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910079	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909969
ES.5362.38	chr11	-	7217	4	ISM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	809	0	718	0	intron_retention	FALSE	canonical	3	551	junction_1	21.2289111041209	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70909320	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375
ES.5362.39	chr11	-	3576	7	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	210.532393918107	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910079	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906587_70909137_70909204_70909969
ES.5362.4	chr11	-	6211	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	33.2915992183073	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGGTATCCAGCATT	NA	False	NA	0	True	ATTAAA	-28	NA	70895249	70874918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70893899
ES.5362.40	chr11	-	6319	6	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_1	219.74112041218	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910076	70898267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70904050_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.42	chr11	-	4524	6	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-10	-3	intron_retention	FALSE	canonical	3	526	junction_3	26.2419511469708	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910079	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70904027_70904268_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.43	chr11	-	8376	3	NIC	ENSMUSG00000018442.14	novel	629	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	549	junction_2	1	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910095	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70909204_70909969
ES.5362.44	chr11	-	3951	7	FSM	ENSMUSG00000018442.14	ENSMUST00000171041.8	1466	7	3	-2488	3	-3	multi-exon	FALSE	canonical	3	3	junction_6	208.810719712056	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910664	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70910216
ES.5362.45	chr11	-	4930	6	ISM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	-501	3	37	-3	intron_retention	FALSE	canonical	3	526	junction_4	27.6144889505491	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910630	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137
ES.5362.46	chr11	-	3771	7	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	209.920619917784	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910097	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909344_70909969
ES.5362.47	chr11	-	3527	6	FSM	ENSMUSG00000018442.14	ENSMUST00000018586.6	629	6	8	-2906	8	-3	multi-exon	FALSE	canonical	2	7	junction_3	222.522268548566	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910087	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70906552_70906627_70909137_70909204_70909969
ES.5362.48	chr11	-	6293	6	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	526	junction_3	27.7445490141757	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910076	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.49	chr11	-	3683	7	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	208.440772296486	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910084	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909904
ES.5362.5	chr11	-	5192	12	NNC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.6761435533836	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGGTATCCAGCATT	NA	False	NA	0	True	ATTAAA	-28	NA	70895284	70874918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884446_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.50	chr11	-	3638	7	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	209.920619917784	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTATCTTGTATTTT	NA	False	NA	-6	True	NA	NA	NA	70910069	70898270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909934
ES.5362.52	chr11	-	1154	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	28	2484	0	7	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGCTTTCGTGTGATC	NA	False	NA	-2	True	AATAAA	-27	NA	70910101	70900751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.53	chr11	-	3826	6	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	5	7	intron_retention	FALSE	canonical	3	526	junction_3	27.7445490141757	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGCTTTCGTGTGATC	NA	False	NA	-2	True	AATAAA	-27	NA	70910090	70900751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.54	chr11	-	1181	8	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-7	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	254.50536259937	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGCTTTCGTGTGAT	NA	False	NA	-3	True	AATAAA	-26	NA	70910076	70900752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70908951_70909005_70909137_70909204_70909969
ES.5362.55	chr11	-	3034	4	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	2	3	intron_retention	FALSE	canonical	3	526	junction_2	10.2089285540757	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTTAAGCTTTCGTGT	NA	False	NA	-6	True	AATAAA	-23	NA	70910066	70900755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70905470_70906552_70906627_70909137
ES.5362.57	chr11	-	2209	6	NIC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-11	0	intron_retention	FALSE	canonical	3	539	junction_4	23.2757384415618	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910080	70900758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70906627_70909137_70909204_70909969
ES.5362.58	chr11	-	1071	8	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	193.033464371717	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910079	70900758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70900850_70900903_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ES.5362.59	chr11	-	1177	7	NNC	ENSMUSG00000018442.14	novel	884	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	208.440772296486	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACTGTATTTAAGCTTT	NA	False	NA	-11	True	AATAAA	-18	NA	70910068	70900760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909904
ES.5362.6	chr11	-	5099	11	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	-30	-3	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	33.85793850783	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTGGTATCCAGCAT	NA	False	NA	-1	True	ATTAAA	-27	NA	70895293	70874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ES.5362.8	chr11	-	5692	9	NIC	ENSMUSG00000040620.16	novel	2266	11	NA	NA	1135	-3	intron_retention	FALSE	canonical	3	85	junction_6	14.3347261920136	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTGGTATCCAGCAT	NA	False	NA	-1	True	ATTAAA	-27	NA	70890645	70874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70886077_70886713_70886900_70890195_70890367_70890546
ES.5362.9	chr11	-	5615	17	Fusion	ENSMUSG00000018442.14_ENSMUSG00000040620.16	novel	5184	12	NA	NA	-7	-3	multi-exon	FALSE	canonical	1	4	junction_11	207.683014170635	450	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTGGTATCCAGCAT	NA	False	NA	-1	True	ATTAAA	-27	NA	70910076	70874919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909331_70909969
ES.5363.1	chr11	-	280	1	Intergenic	novelGene_4201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	70937874	70937594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_70937600_70937900
ES.5364.1	chr11	-	177	1	Intergenic	novelGene_4202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAGAAA	7700	False	NA	NA	False	NA	NA	NA	71011580	71011403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_71011400_71011600
ES.5365.1	chr11	-	5421	1	Intergenic	novelGene_4203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	71402036	71396615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_71396600_71402000
ES.5366.1	chr11	+	1681	2	ISM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	-40	28679	-40	0	5prime_fragment	FALSE	canonical	3	14	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTTTGTTGTGAAG	NA	False	NA	NA	False	AGTAAA	-16	NA	71641765	71651794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_71642056_71650403
ES.5366.2	chr11	+	2878	9	FSM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	7	junction_4	2.29128784747792	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTCTGCCTCTCT	NA	False	NA	19	True	CATAAA	-32	NA	71641793	71680473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ES.5366.3	chr11	+	4892	2	ISM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	37	25391	37	3288	5prime_fragment	FALSE	canonical	3	14	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCGCTCCTGGTACCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	71641842	71655082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_71642056_71650403
ES.5366.4	chr11	+	2914	10	NNC	ENSMUSG00000020811.17	novel	2866	9	NA	NA	53	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	4.47213595499958	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTCTGCCTCTCT	NA	False	NA	19	True	CATAAA	-32	NA	71641858	71680473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71673752_71673854_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ES.5367.1	chr11	+	1508	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-9	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	111.264729362004	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCATGTTTTTAGA	NA	False	NA	9	True	AATAAA	-13	NA	71933271	71938191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933842_71934164_71935815_71936085_71936504_71936601_71937165_71937220_71937512
ES.5367.10	chr11	+	4323	2	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	23	-5	intron_retention	FALSE	canonical	3	248	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCATGTTTTTAGA	NA	False	NA	9	True	AATAAA	-13	NA	71933303	71938191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71936601_71937165
ES.5367.13	chr11	+	2724	5	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_2	98.720248682831	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933305	71938192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933842_71934164_71934986_71936601_71937165_71937220_71937512
ES.5367.14	chr11	+	3609	4	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_1	109.060635530068	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933305	71938192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71936085_71936504_71936601_71937165_71937220_71937512
ES.5367.15	chr11	+	4114	3	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	210	junction_2	4.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATGTTTTTAGATAT	NA	False	NA	12	True	AATAAA	-16	NA	71933305	71938194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71933361_71933842_71937220_71937512
ES.5367.16	chr11	+	3580	3	NNC	ENSMUSG00000020808.4	novel	747	3	NA	NA	-20	-4	intron_retention	FALSE	canonical	0	0	junction_2	109.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933307	71938192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933842_71934164_71934986
ES.5367.17	chr11	+	4389	2	FSM	ENSMUSG00000020808.4	ENSMUST00000127369.2	681	2	-2	-3706	-2	0	multi-exon	FALSE	canonical	3	219	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933325	71938196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_71933361_71933842
ES.5367.18	chr11	+	1746	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	-48	intron_retention	FALSE	canonical	1	2	junction_5	91.3398051235057	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAGGTCACATTGTTT	NA	False	NA	11	True	ATTAAA	-17	NA	71933327	71938148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933842_71934164_71935806_71936601_71937165_71937220_71937512_71937730_71937821
ES.5367.19	chr11	+	2736	3	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	48	7	1	-7	intron_retention	FALSE	canonical	3	219	junction_1	8	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGGCATGTTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	71933328	71938189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_71933361_71933842_71934164_71935806
ES.5367.2	chr11	+	1523	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	-8	-2	-8	2	multi-exon	FALSE	canonical	0	0	junction_3	92.1316449435263	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTTTTTAGATATCTAT	NA	False	NA	16	True	AATAAA	-20	NA	71933272	71938198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
ES.5367.20	chr11	+	4573	2	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	210	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933330	71938196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71937220_71937512
ES.5367.3	chr11	+	1098	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.918731838433	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGGCATGTTTTTA	NA	False	NA	7	True	AATAAA	-11	NA	71933277	71938189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933849_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937916
ES.5367.4	chr11	+	1109	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.202448182704	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933280	71938196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937916
ES.5367.5	chr11	+	3573	4	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	210	junction_3	16.2138486760204	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATGTTTTTAGATAT	NA	False	NA	12	True	AATAAA	-16	NA	71933281	71938194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71933361_71933842_71936601_71937165_71937220_71937512
ES.5367.6	chr11	+	4048	3	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	5	-5	intron_retention	FALSE	canonical	3	210	junction_2	19	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCATGTTTTTAGA	NA	False	NA	9	True	AATAAA	-13	NA	71933285	71938191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71936601_71937165_71937220_71937512
ES.5367.7	chr11	+	4902	1	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	12	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATGTTTTTAGATAT	NA	False	NA	12	True	AATAAA	-16	NA	71933292	71938194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71933300_71938200
ES.5367.8	chr11	+	1919	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	14	0	intron_retention	FALSE	canonical	3	210	junction_4	14.6116391962025	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933294	71938196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71933361_71933842_71934164_71935806_71936601_71937165_71937220_71937512
ES.5367.9	chr11	+	3134	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	18	-4	intron_retention	FALSE	canonical	0	0	junction_2	98.720248682831	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGCATGTTTTTAGAT	NA	False	NA	10	True	AATAAA	-14	NA	71933298	71938192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_71933361_71933842_71936085_71936504_71936601_71937165_71937220_71937512
ES.5368.2	chr11	-	6674	20	FSM	ENSMUSG00000040543.17	ENSMUST00000075258.13	6555	20	-119	0	-119	0	multi-exon	TRUE	canonical	1	2	junction_1	2.67542421623975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCGCTCTGTTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	72026723	71938353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_71942187_71942666_71942796_71946955_71947140_71948845_71948996_71949211_71949361_71949663_71949781_71952299_71952417_71953920_71954070_71954888_71955084_71956291_71956463_71957931_71958105_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
ES.5368.3	chr11	-	9034	18	NNC	ENSMUSG00000040543.17	novel	6555	20	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_2	3.16118325706927	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGCGCTCTGTTTTGGG	NA	False	NA	NA	False	NA	NA	NA	72026551	71938355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_71942187_71942666_71942796_71946949_71948996_71949211_71949361_71949663_71949781_71952299_71952417_71953920_71955084_71956291_71956463_71957931_71958108_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
ES.5369.1	chr11	+	168	1	Intergenic	novelGene_4204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTCTATAGTAA	NA	False	NA	NA	False	NA	NA	NA	72062384	72062552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72062400_72062600
ES.537.1	chr1	+	178	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAGAAAAA	6044	False	NA	NA	False	NA	NA	NA	58808696	58808874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_58808700_58808900
ES.5370.1	chr11	+	1126	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	-344	199	-344	-199	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTTGAGTAAAATGA	NA	False	NA	45	True	AATAAA	-45	NA	72098028	72100642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ES.5370.3	chr11	+	649	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	13	-237	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	641	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAACCATTAAGTTT	NA	False	NA	7	True	AATAAA	-7	NA	72098385	72100604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72098595_72099555_72099632_72100240
ES.5370.4	chr11	+	763	4	NNC	ENSMUSG00000020803.4	novel	981	4	NA	NA	13	-237	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	664.246105663322	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAACCATTAAGTTT	NA	False	NA	7	True	AATAAA	-7	NA	72098385	72100604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72098595_72099078_72099161_72099523_72099632_72100240
ES.5370.5	chr11	+	660	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	14	-231	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	739	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTAAGTTTTTTAAC	NA	False	NA	13	True	AATAAA	-13	NA	72098386	72100610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72098595_72099078_72099161_72100240
ES.5370.6	chr11	+	1806	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	24	-849	24	849	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTTTGAGGCTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	72098396	72101690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ES.5370.7	chr11	+	1114	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	25	-237	intron_retention	FALSE	canonical	3	1302	junction_2	99.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAAACCATTAAGTTT	NA	False	NA	7	True	AATAAA	-7	NA	72098397	72100604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72098595_72099078_72099632_72100240
ES.5370.8	chr11	+	945	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	26	10	26	-10	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCATATGCTTAACTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	72098398	72100831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ES.5371.1	chr11	-	3349	20	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	224	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	8.20985152422755	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGAGTATTGTACTAAA	NA	False	NA	NA	False	AAAAAG	-35	NA	72097822	72044752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72044882_72045991_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72097683
ES.5371.11	chr11	-	4036	19	NNC	ENSMUSG00000020807.16	novel	4390	19	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	8.04999808296887	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72098263	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089434_72093237_72093377_72098021
ES.5371.12	chr11	-	7697	20	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	370	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	7.94370776620038	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72097482	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72094019
ES.5371.14	chr11	-	3168	15	NIC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	11099	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	10.2062905772342	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTATTTGAAGTAA	NA	False	NA	-2	True	AATAAA	-20	NA	72082339	72044924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060670_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082103_72082171_72082244
ES.5371.15	chr11	-	7829	21	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	481	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.1887192521926	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTATTTGAAGTAA	NA	False	NA	-2	True	AATAAA	-20	NA	72097565	72044924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060670_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082103_72082171_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72094019
ES.5371.17	chr11	-	4387	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	15	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.13472641295056	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGTCTATTTGAAGTA	NA	False	NA	-3	True	AATAAA	-19	NA	72097837	72044925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72097601
ES.5371.18	chr11	-	4466	19	FSM	ENSMUSG00000020807.16	ENSMUST00000238653.2	4390	19	-79	3	-51	-3	multi-exon	FALSE	canonical	3	10	junction_18	5.57025832235613	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGTCTATTTGAAGTA	NA	False	NA	-3	True	AATAAA	-19	NA	72098336	72044925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ES.5371.19	chr11	-	4944	20	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	-543	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	10.3923048454133	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGTCTATTTGAAGTA	NA	False	NA	-3	True	AATAAA	-19	NA	72094740	72044925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066399_72067482_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086712_72089188_72089790_72093237_72093377_72094019
ES.5371.2	chr11	-	4168	18	NIC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	56	1	intron_retention	FALSE	canonical	0	0	junction_11	9.83708117735975	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTAGAGTATTGTACTAA	NA	False	NA	NA	False	AAAAAG	-34	NA	72093382	72044753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72080373_72080585_72082103_72082171_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237
ES.5371.20	chr11	-	4595	21	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.0727354775155	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	-4	True	AATAAA	-18	NA	72098042	72044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066680_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082103_72082171_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ES.5371.21	chr11	-	4733	20	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	-329	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	8.42828636677305	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	-4	True	AATAAA	-18	NA	72094526	72044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72094019
ES.5371.22	chr11	-	4564	1	NIC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	-3361	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	-4	True	AATAAA	-18	NA	72049490	72044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72044900_72049500
ES.5371.23	chr11	-	7144	19	NNC	ENSMUSG00000020807.16	novel	4390	19	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	6.62882780170758	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	-4	True	AATAAA	-18	NA	72098245	72044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72098021
ES.5371.24	chr11	-	4420	20	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	238	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	9.39882706184682	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGTCTATTTGAAGT	NA	False	NA	-4	True	AATAAA	-18	NA	72097808	72044926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082103_72082171_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72097601
ES.5371.25	chr11	-	4261	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	177	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	6.9602043392737	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGAACATGTCTATT	NA	False	NA	-10	True	AATAAA	-12	NA	72097675	72044932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72097558
ES.5371.26	chr11	-	3332	2	ISM	ENSMUSG00000107877.3	ENSMUST00000204457.3	7987	19	733	48226	733	-48226	5prime_fragment	FALSE	canonical	3	4	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATTTTCTAGATTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	72097119	72093148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_72093381_72094019
ES.5371.3	chr11	-	6020	20	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.36165102522352	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACTAGAGTATTGTACT	NA	False	NA	NA	False	AAAAAG	-32	NA	72098056	72044755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72044882_72045991_72046265_72049617_72049843_72050225_72050347_72053568_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ES.5371.4	chr11	-	6731	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.13472641295056	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72097885	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72095304
ES.5371.5	chr11	-	4562	20	NNC	ENSMUSG00000020807.16	novel	4390	19	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	7.36165102522352	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72098349	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72053568_72053649_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ES.5371.6	chr11	-	4213	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	6.7889252590406	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72097864	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72097801
ES.5371.7	chr11	-	5818	20	NNC	ENSMUSG00000020807.16	novel	4653	20	NA	NA	-2182	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	9.39882706184682	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72095620	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082103_72082171_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72094019
ES.5371.8	chr11	-	10203	18	NNC	ENSMUSG00000020807.16	novel	4390	19	NA	NA	15	0	intron_retention	FALSE	canonical	1	1	junction_15	7.65836268605385	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72098078	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086712_72089188_72089790_72093237_72093381_72098021
ES.5371.9	chr11	-	4272	19	NNC	ENSMUSG00000107877.3	novel	7987	19	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.13472641295056	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72097807	72044922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093377_72097685
ES.5372.1	chr11	+	2493	1	FSM	ENSMUSG00000053574.6	ENSMUST00000066087.5	2606	1	20	93	-14	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTGCTTCTCTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	72105983	72108476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72106000_72108500
ES.5372.2	chr11	+	3274	1	FSM	ENSMUSG00000053574.6	ENSMUST00000066087.5	2606	1	33	-701	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTCACTTCTTATTC	NA	False	NA	NA	False	AATAAA	-14	NA	72105996	72109270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72106000_72109300
ES.5373.1	chr11	-	1206	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	-40	-5	-40	5	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTCCACTTTGATTTCT	NA	False	NA	0	True	AATAAA	-20	NA	72106458	72102544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ES.5373.2	chr11	-	3070	2	ISM	ENSMUSG00000020801.9	ENSMUST00000129264.2	837	3	0	-1488	0	4	intron_retention	FALSE	canonical	3	203	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCTCCACTTTGATTTC	NA	False	NA	-1	True	AATAAA	-19	NA	72105879	72102545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_72104700_72104963
ES.5373.3	chr11	-	2274	3	FSM	ENSMUSG00000020801.9	ENSMUST00000129264.2	837	3	45	-1482	45	-2	multi-exon	FALSE	canonical	3	203	junction_1	10.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGATTGCTCCACTTT	NA	False	NA	-7	True	AATAAA	-13	NA	72105834	72102551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72104700_72104963_72105042_72105786
ES.5374.1	chr11	-	4497	1	Intergenic	novelGene_4205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTTGCTATTCTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	72119851	72115354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72115400_72119900
ES.5374.2	chr11	-	1488	2	Intergenic	novelGene_4206	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGATACAAACCCGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	72123034	72115367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72116591_72122769
ES.5374.3	chr11	-	2203	1	Intergenic	novelGene_4207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGGCTTGTTTTAA	NA	False	NA	NA	False	AATAAA	-12	NA	72123017	72120814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72120800_72123000
ES.5375.1	chr11	-	6507	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	0	-3178	0	3178	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATAGTTAATTTTAAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	72157485	72129636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ES.5375.10	chr11	-	2305	8	ISM	ENSMUSG00000020805.15	ENSMUST00000208056.2	3111	12	7579	161	7579	-161	3prime_fragment	FALSE	canonical	3	36	junction_1	7.01019665507731	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGACGAGGCCCGTGGA	NA	False	NA	NA	False	NA	NA	NA	72149840	72133076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783
ES.5375.11	chr11	-	1810	1	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	18204	-3192	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	72139215	72137405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72137400_72139200
ES.5375.12	chr11	-	1882	1	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	17427	-3897	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGACTAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	72139992	72138110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72138100_72140000
ES.5375.13	chr11	-	2553	9	NNC	ENSMUSG00000020805.15	novel	1746	11	NA	NA	4055	-3897	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	17.7689159770651	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAGACTAAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	72153364	72138110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72138655_72141551_72141671_72143083_72143185_72143572_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848
ES.5375.14	chr11	-	994	4	NIC	ENSMUSG00000020805.15	novel	2186	4	NA	NA	85	260	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	22.2910046630673	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGCTAGACTTATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72157963	72150656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72151209_72152848_72152978_72157289_72157411_72157771
ES.5375.15	chr11	-	1077	6	NNC	ENSMUSG00000020805.15	novel	1746	11	NA	NA	-21763	260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.7580290007101	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTGCTAGACTTATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72179811	72150656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72151209_72152438_72152576_72152848_72152978_72172018_72172079_72173402_72173462_72179671
ES.5375.16	chr11	-	3512	1	Intergenic	novelGene_4208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGGACAGAAGCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	72176846	72173334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72173300_72176800
ES.5375.2	chr11	-	6394	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	-24	-3041	-24	3041	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCCTCTTTATGGCAGA	NA	False	NA	NA	False	NA	NA	NA	72157509	72129773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ES.5375.3	chr11	-	3202	11	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-17	39	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	16.135674761224	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTATTCCACATTTGCG	NA	False	NA	39	True	NA	NA	NA	72157456	72132775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152848_72152978_72157289
ES.5375.5	chr11	-	3628	13	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-102	-5	combination_of_known_junctions	FALSE	canonical	3	8	junction_12	13.363247692417	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	-5	True	AATAAA	-18	NA	72158150	72132819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289_72157411_72157771
ES.5375.6	chr11	-	4525	11	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	36	junction_1	6.8818602136341	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGGTGCCTGGCCTT	NA	False	NA	-5	True	AATAAA	-18	NA	72157456	72132819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72152576_72152848_72152978_72157289
ES.5375.7	chr11	-	3236	12	NNC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.4214001176504	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTGGGTGCCTGGCCT	NA	False	NA	-6	True	AATAAA	-17	NA	72157456	72132820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152575_72152663_72152848_72152970_72157289
ES.5375.8	chr11	-	2311	12	NNC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.6917623280076	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTCCTGGGTGCCTGGCC	NA	False	NA	-7	True	AATAAA	-16	NA	72157410	72132821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72133527_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ES.5375.9	chr11	-	3151	12	NIC	ENSMUSG00000020805.15	novel	3329	12	NA	NA	210	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	18.4896665355285	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCCTGGGTGCCTGGC	NA	False	NA	-8	True	AATAAA	-15	NA	72157838	72132822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72134463_72135951_72136090_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289_72157411_72157771
ES.5376.1	chr11	-	135	1	Intergenic	novelGene_4209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAGTTGTCTGTTCATG	NA	False	NA	NA	False	NA	NA	NA	72182927	72182792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72182800_72182900
ES.5377.1	chr11	+	397	1	Intergenic	novelGene_4211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72188975	72189372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72189000_72189400
ES.5377.2	chr11	+	207	1	Intergenic	novelGene_4210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCTCAACCTATTG	NA	False	NA	NA	False	NA	NA	NA	72188975	72189182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72189000_72189200
ES.5378.1	chr11	+	658	5	NNC	ENSMUSG00000040483.16	novel	2597	6	NA	NA	-51	407	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.65698400254929	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTGTAATCATGCTT	NA	False	NA	NA	False	NA	NA	NA	72192403	72203314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72192536_72194152_72194289_72199432_72199538_72202781_72202812_72203059
ES.5378.2	chr11	+	2101	5	NNC	ENSMUSG00000040483.16	novel	2597	6	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.65698400254929	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGTGTCTTTCACGTC	NA	False	NA	10	True	NA	NA	NA	72192420	72204561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72192536_72194152_72194289_72199432_72199751_72202781_72202812_72203059
ES.5378.3	chr11	+	1943	6	NNC	ENSMUSG00000040483.16	novel	2597	6	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3.44093010681705	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGTGTCTTTCACGTC	NA	False	NA	10	True	NA	NA	NA	72192453	72204561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72192536_72194152_72194289_72197389_72197479_72199432_72199538_72202781_72202811_72203059
ES.5378.4	chr11	+	2316	7	NNC	ENSMUSG00000040483.16	novel	2597	6	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2.92498812913071	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTTTAGAGCTGTGTC	NA	False	NA	1	True	NA	NA	NA	72192481	72204552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72192536_72194152_72194289_72195491_72195688_72197389_72197479_72199432_72199751_72202781_72202812_72203059
ES.5378.5	chr11	+	179	1	ISM	ENSMUSG00000040483.16	ENSMUST00000146233.8	2597	6	10367	1558	10332	94	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGCATC	NA	False	NA	NA	False	NA	NA	NA	72202822	72203001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72202800_72203000
ES.5379.1	chr11	+	2247	4	FSM	ENSMUSG00000070388.4	ENSMUST00000108504.2	1708	4	-105	-434	-105	434	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGTACTGAAGTGACA	NA	False	NA	NA	False	NA	NA	NA	72205164	72210676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72205362_72207570_72208676_72209167_72209345_72209908
ES.5379.2	chr11	+	3179	3	ISM	ENSMUSG00000070388.4	ENSMUST00000108504.2	1708	4	2777	-2039	2777	2039	3prime_fragment	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGGTCATGGTGT	468	False	NA	NA	False	NA	NA	NA	72208046	72212281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72208676_72209167_72209345_72209908
ES.538.1	chr1	+	2073	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	14	498	14	-3	multi-exon	FALSE	canonical	2	10	junction_6	4.14578098794425	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGTATGTATGTTTTG	2938	False	NA	0	True	AATATA	-13	NA	58834546	58886164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
ES.538.2	chr1	+	222	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	3096	523	3096	-523	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTCTTTGGAATTT	8429	False	NA	NA	False	NA	NA	NA	58840037	58840259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_58840000_58840300
ES.5380.1	chr11	-	169	1	Intergenic	novelGene_4212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCTTTAAGCCGG	32	True	NA	NA	False	NA	NA	NA	72207214	72207045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72207000_72207200
ES.5381.1	chr11	-	254	1	Intergenic	novelGene_4213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCCTCACTCTACCAG	NA	False	NA	NA	False	NA	NA	NA	72232107	72231853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72231900_72232100
ES.5382.1	chr11	+	570	1	Intergenic	novelGene_4214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCATGGTATCCCAGC	NA	False	NA	NA	False	ATTAAA	-19	NA	72282823	72283393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72282800_72283400
ES.5383.10	chr11	-	1362	5	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4486	-3	intron_retention	FALSE	canonical	3	29	junction_4	10.6624340560681	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGACAAGAGTTAGCAC	NA	False	NA	-11	True	ATTAAA	-7	NA	72247636	72235557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72246165_72247574
ES.5383.11	chr11	-	1618	4	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4496	-6029	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	12.8149218578274	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATATTTTTAGCGTGTA	NA	False	NA	NA	False	NA	NA	NA	72247626	72241583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72242877_72245524_72245669_72246035_72246165_72247574
ES.5383.12	chr11	-	164	2	Antisense	novelGene_ENSMUSG00000098658.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAGAAAACAGAACA	NA	False	NA	NA	False	NA	NA	NA	72321645	72243462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72243477_72321495
ES.5383.13	chr11	-	1461	8	NNC	ENSMUSG00000045667.15	novel	415	4	NA	NA	2	21458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	189.191836558579	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAGCACACTTTTGAG	NA	False	NA	NA	False	CATAAA	-17	NA	72302535	72258531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72258673_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.14	chr11	-	5319	4	NIC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	61	1462	intron_retention	FALSE	canonical	3	548	junction_2	11.0453610171873	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCCTAAGGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	72293506	72278527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72282240_72290699_72290852_72291154_72292354_72293250
ES.5383.15	chr11	-	4211	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	-23	-616	-21	616	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTATGCGTTTCCCTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	72302560	72279373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.16	chr11	-	3607	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	-30	-5	-28	5	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGTACTCATTTGTA	NA	False	NA	-1	True	ATTAAA	-20	NA	72302567	72279984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.17	chr11	-	3265	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	1358	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	193.173074559303	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGTACTCATTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	72301179	72279986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72301021
ES.5383.18	chr11	-	3314	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-8853	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	230.188204248176	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTGGTACTCATTT	NA	False	NA	-4	True	ATTAAA	-17	NA	72311392	72279987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72311055_72311162_72311290
ES.5383.19	chr11	-	5878	4	NIC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-1593	0	intron_retention	FALSE	canonical	3	548	junction_2	11.0453610171873	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTGGTGGTACTCAT	NA	False	NA	-6	True	ATTAAA	-15	NA	72295527	72279989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72282240_72290699_72290852_72291154_72292354_72293250
ES.5383.2	chr11	-	527	3	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	15289	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72236833	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72235798_72236411_72236609_72236751
ES.5383.20	chr11	-	3612	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.611689899992	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTGGTGGTACTCAT	NA	False	NA	-6	True	ATTAAA	-15	NA	72302532	72279989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293791_72294077_72294742_72294831_72302069
ES.5383.21	chr11	-	2674	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	-48	-2	-48	2	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGTGATCATTGTTT	NA	False	NA	1	True	GATAAA	-20	NA	72302587	72280937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.22	chr11	-	3520	7	NIC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	503	junction_6	22.561028345357	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGAGTGATCATTG	NA	False	NA	-2	True	GATAAA	-17	NA	72302535	72280940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72282240_72290699_72290852_72291154_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.23	chr11	-	2285	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	331	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	191.213952184991	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTTGAGTGATCATT	NA	False	NA	-3	True	GATAAA	-16	NA	72302206	72280941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294071_72294740_72294831_72302069
ES.5383.24	chr11	-	2743	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	232.480341910881	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATGACTTTGAGTGATC	NA	False	NA	-6	True	GATAAA	-13	NA	72302535	72280944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72285534_72285663_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.25	chr11	-	3125	7	NIC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	2	-5	intron_retention	FALSE	canonical	3	500	junction_3	28.429737951659	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATGACTTTGAGTGATC	NA	False	NA	-6	True	GATAAA	-13	NA	72302535	72280944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72294077_72294742_72294831_72302069
ES.5383.26	chr11	-	2670	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.34252586059	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATGACTTTGAGTGATC	NA	False	NA	-6	True	GATAAA	-13	NA	72302535	72280944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290116_72290172_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.28	chr11	-	2639	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	192.825394212125	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGACTTTGAGTG	NA	False	NA	-9	True	GATAAA	-10	NA	72302535	72280947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294858_72302069
ES.5383.3	chr11	-	4002	4	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4502	-2	intron_retention	FALSE	canonical	3	29	junction_3	11.8977121983832	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72247620	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72235798_72236411_72236609_72242653_72246165_72247574
ES.5383.30	chr11	-	2314	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	1348	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	193.173074559303	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGACTTTGAGTG	NA	False	NA	-9	True	GATAAA	-10	NA	72301189	72280947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72301021
ES.5383.31	chr11	-	2435	10	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-8856	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	256.356426258346	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGACTTTGAGTG	NA	False	NA	-9	True	GATAAA	-10	NA	72311395	72280947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72306583_72306662_72311055_72311162_72311290
ES.5383.34	chr11	-	2185	8	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	1163	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	193.173074559303	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAAGTTGATGACTTTG	NA	False	NA	-13	True	GATAAA	-6	NA	72301374	72280951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72301331
ES.5383.35	chr11	-	2347	9	NNC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	-8852	-14	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	230.188204248176	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCAAAGTTGATGACTT	NA	False	NA	-15	True	GATAAA	-4	NA	72311391	72280953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72311055_72311162_72311290
ES.5383.36	chr11	-	1748	2	NIC	ENSMUSG00000045667.15	novel	3572	8	NA	NA	0	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGCCCAAAGTTGA	NA	False	NA	-21	True	AATATA	-8	NA	72302537	72280959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72282240_72302069
ES.5383.37	chr11	-	2431	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	4	189	2	-189	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATTGTTTATGTATT	NA	False	NA	NA	False	TTTAAA	-21	NA	72302535	72281128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.38	chr11	-	1720	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	-40	944	-40	-944	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATTGGTGCTAAGT	NA	False	NA	NA	False	NA	NA	NA	72302579	72281883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.39	chr11	-	168	1	Intergenic	novelGene_4215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	72321647	72321479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72321500_72321600
ES.5383.4	chr11	-	984	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4505	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.6320270880016	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72247617	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247574
ES.5383.5	chr11	-	993	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4378	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	22.0581050863396	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72247744	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247692
ES.5383.6	chr11	-	1514	5	NIC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	3606	-2	intron_retention	FALSE	canonical	3	33	junction_4	8.95474734428616	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72248516	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72246165_72248310
ES.5383.7	chr11	-	5649	12	Fusion	ENSMUSG00000020799.17_ENSMUSG00000045667.15	novel	1403	8	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_5	253.024743179708	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTAGCACAGAGCTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	72302535	72235549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_72235798_72236411_72236609_72242653_72246165_72248310_72248477_72250504_72250712_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ES.5383.8	chr11	-	1139	6	ISM	ENSMUSG00000020799.17	ENSMUST00000108502.8	1403	8	3612	4	3612	3	3prime_fragment	FALSE	canonical	3	33	junction_5	9.09065454189081	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTTAGCACAGAGCT	NA	False	NA	-5	True	ATTAAA	-13	NA	72248510	72235551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310
ES.5383.9	chr11	-	3770	5	NIC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	3629	3	intron_retention	FALSE	canonical	3	33	junction_4	10.1242283656583	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTTAGCACAGAGCT	NA	False	NA	-5	True	ATTAAA	-13	NA	72248493	72235551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72235798_72236411_72236609_72242653_72245669_72246035_72246165_72248310
ES.5384.1	chr11	+	7777	28	Fusion	ENSMUSG00000040471.18_ENSMUSG00000040463.17	novel	4358	26	NA	NA	-277	-209	intron_retention	FALSE	canonical	0	0	junction_3	852.801411181747	2654	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGACTCAACCTTCC	NA	False	NA	55	True	AATAAA	-25	NA	72326074	72342385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_72327468_72327544_72327659_72327964_72329546_72331838_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.100	chr11	+	6413	20	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	8	-220	intron_retention	FALSE	canonical	3	2385	junction_8	195.237904452952	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332190	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72334478_72334566_72336113_72336433_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.102	chr11	+	3678	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	9	-214	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	555.308009666707	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332191	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341535_72342091
ES.5384.104	chr11	+	4332	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-212	intron_retention	FALSE	canonical	3	37	junction_22	575.172516340723	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATCTCTGACTCAACCT	NA	False	NA	52	True	AATAAA	-22	NA	72332193	72342382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.106	chr11	+	4377	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-220	intron_retention	FALSE	canonical	3	2354	junction_12	207.311154862819	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332193	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.107	chr11	+	4095	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-218	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	873.694157929421	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332193	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333461_72333571_72333680_72334301_72334475_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341470_72341601_72341702
ES.5384.109	chr11	+	4076	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	552.11579365202	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332195	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72339965_72340098_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.110	chr11	+	6006	21	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-219	intron_retention	FALSE	canonical	3	2360	junction_6	206.057146199786	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332195	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72337895_72337974_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.111	chr11	+	4422	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-215	intron_retention	FALSE	canonical	3	2360	junction_7	199.672188816489	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCAATCTCTGACTCAA	NA	False	NA	49	True	AATAAA	-19	NA	72332195	72342379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.113	chr11	+	4137	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	556.103751470892	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332195	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336705_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.115	chr11	+	4117	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	556.103751470892	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332195	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336726_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.116	chr11	+	4997	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-7	-207	intron_retention	FALSE	canonical	3	2354	junction_9	208.099333599673	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332195	72342387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.117	chr11	+	5019	23	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-219	intron_retention	FALSE	canonical	1	14	junction_21	580.512932209791	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332196	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341454_72341601_72341702
ES.5384.118	chr11	+	4109	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	556.244426848485	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332196	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338568_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.119	chr11	+	5296	21	NIC	ENSMUSG00000040463.17	novel	4448	25	NA	NA	-6	-220	intron_retention	FALSE	canonical	3	2354	junction_10	216.992136954315	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332196	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.12	chr11	+	5089	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-45	-218	intron_retention	FALSE	canonical	3	2385	junction_11	192.513088532178	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332135	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.120	chr11	+	3959	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	556.187902061884	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332196	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335635_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.121	chr11	+	4439	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	1	intron_retention	FALSE	canonical	3	2360	junction_7	199.587069380481	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGGACCTGGTTCT	NA	False	NA	20	True	AATAAA	-33	NA	72332196	72342595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.122	chr11	+	8054	10	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-219	intron_retention	FALSE	canonical	3	37	junction_9	856.772107648495	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332196	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72334478_72334566_72338466_72338555_72338953_72339042_72340660_72340818_72340921_72341702
ES.5384.124	chr11	+	4393	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-220	intron_retention	FALSE	canonical	3	2354	junction_11	206.201023284999	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332196	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.125	chr11	+	4407	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-6	-220	intron_retention	FALSE	canonical	3	2354	junction_9	201.232832541218	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332196	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.129	chr11	+	4516	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-4	-220	intron_retention	FALSE	canonical	3	2360	junction_6	201.191122489525	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332198	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.131	chr11	+	4114	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-4	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	555.308009666707	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332198	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341708
ES.5384.132	chr11	+	5680	21	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-4	-219	intron_retention	FALSE	canonical	3	2354	junction_11	208.058038777645	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332198	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336888_72336983_72337895_72337974_72338466_72338555_72338709_72338781_72338953_72339042_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.133	chr11	+	4111	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-3	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	555.308009666707	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332199	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341592_72341702
ES.5384.135	chr11	+	4417	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-219	intron_retention	FALSE	canonical	3	2354	junction_10	207.916734824395	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332201	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.136	chr11	+	4679	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-219	intron_retention	FALSE	canonical	3	2354	junction_11	205.952310418375	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332201	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.138	chr11	+	4097	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	553.594037540146	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332201	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338802_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.141	chr11	+	4298	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-221	intron_retention	FALSE	canonical	3	2360	junction_7	198.139083495199	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATGACGCCAATCTCTG	NA	False	NA	43	True	AATAAA	-13	NA	72332201	72342373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.142	chr11	+	4118	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-210	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_23	540.379549576036	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTCTGACTCAACCTTC	NA	False	NA	54	True	AATAAA	-24	NA	72332201	72342384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340827_72340921_72341451_72341601_72341702
ES.5384.144	chr11	+	5616	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-1	-218	intron_retention	FALSE	canonical	3	2354	junction_12	198.800036583132	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332201	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337895_72337974_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72341601_72341702
ES.5384.146	chr11	+	5866	19	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-220	intron_retention	FALSE	canonical	3	2360	junction_6	185.10837666381	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332202	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334735_72334828_72334947_72335507_72336560_72336719_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.148	chr11	+	4538	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-215	intron_retention	FALSE	canonical	3	2360	junction_7	197.882237611648	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCAATCTCTGACTCAA	NA	False	NA	49	True	AATAAA	-19	NA	72332202	72342379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.15	chr11	+	4995	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-41	-214	intron_retention	FALSE	canonical	3	2360	junction_7	198.890561808648	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332139	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.150	chr11	+	4116	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	555.133209239008	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332202	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340551_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.151	chr11	+	4096	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-219	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	553.881792443117	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332202	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337063_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.152	chr11	+	5201	21	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-220	intron_retention	FALSE	canonical	3	2354	junction_9	201.524012216907	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332202	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336888_72336983_72337084_72337797_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.155	chr11	+	4114	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	552.730395039028	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	48	True	AATAAA	-18	NA	72332202	72342378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339874_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.156	chr11	+	4031	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-218	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	567.711657482623	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332202	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.157	chr11	+	4134	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-219	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	548.371077282528	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332203	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341433_72341601_72341702
ES.5384.16	chr11	+	4197	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-36	-220	intron_retention	FALSE	canonical	0	0	junction_12	563.858304452457	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332144	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336838_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.160	chr11	+	3947	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-220	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	566.221461140034	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332203	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.161	chr11	+	3703	24	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	2	-219	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	777.917881671207	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332204	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72336001_72336115_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.162	chr11	+	4039	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	2	-219	intron_retention	FALSE	canonical	3	37	junction_23	559.956509923468	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332204	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.163	chr11	+	5700	22	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	2	-209	intron_retention	FALSE	canonical	3	2354	junction_10	210.607134445548	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGACTCAACCTTCC	NA	False	NA	55	True	AATAAA	-25	NA	72332204	72342385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451
ES.5384.166	chr11	+	5242	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-219	intron_retention	FALSE	canonical	3	2360	junction_7	196.538164232802	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332208	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.168	chr11	+	4152	27	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	7	176431	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	545.621979647591	3061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTGTAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	72332209	72519025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702_72342379_72518986
ES.5384.169	chr11	+	4329	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	175	-220	intron_retention	FALSE	canonical	3	2385	junction_11	193.411654720749	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332377	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334947_72335507_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.17	chr11	+	4946	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-36	-207	intron_retention	FALSE	canonical	3	2354	junction_10	206.546112978166	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332144	72342387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.170	chr11	+	4058	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	198	102	176	-102	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGGAATATATATTTG	NA	False	NA	-83	True	TTTAAA	-20	NA	72332378	72342492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.171	chr11	+	4035	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	352	-220	intron_retention	FALSE	canonical	3	2360	junction_6	201.917118460206	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332554	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.172	chr11	+	3830	24	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	1043	213	1021	-213	3prime_fragment	FALSE	canonical	3	2354	junction_10	207.031745554388	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAATCTCTGACTCAACC	NA	False	NA	51	True	AATAAA	-21	NA	72333223	72342381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.173	chr11	+	3741	23	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1192	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	586.254544115325	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72333394	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336115_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.175	chr11	+	3665	22	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	1389	219	-1028	-219	3prime_fragment	FALSE	canonical	3	2354	junction_8	214.44179500907	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72333569	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.176	chr11	+	3575	22	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-961	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	587.700677358637	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72333636	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340899_72341451_72341601_72341702
ES.5384.177	chr11	+	4518	20	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-697	-218	intron_retention	FALSE	canonical	3	2354	junction_6	223.427245590197	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72333900	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72334478_72334566_72334735_72334828_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.178	chr11	+	5274	14	NIC	ENSMUSG00000040463.17	novel	4014	24	NA	NA	-489	-220	intron_retention	FALSE	canonical	3	2360	junction_1	228.152601272604	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72334108	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72334735_72334828_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451
ES.5384.179	chr11	+	3557	21	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	2119	219	-298	-219	3prime_fragment	FALSE	canonical	3	2354	junction_7	219.660482335808	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72334299	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.180	chr11	+	3386	20	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	2384	214	-33	-214	3prime_fragment	FALSE	canonical	3	2354	junction_6	221.93951161162	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72334564	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.181	chr11	+	3292	20	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	34	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	626.68371767141	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72334631	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336867_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.183	chr11	+	3468	15	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	746	-219	intron_retention	FALSE	canonical	0	0	junction_1	948.970247485265	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72335343	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72336115_72336433_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.184	chr11	+	3565	16	NIC	ENSMUSG00000040463.17	novel	4014	24	NA	NA	955	4	intron_retention	FALSE	canonical	3	2385	junction_4	215.939333044157	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGACCTGGTTCTTGT	NA	False	NA	23	True	AATAAA	-36	NA	72335552	72342598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.185	chr11	+	3399	14	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1405	-220	intron_retention	FALSE	canonical	3	2354	junction_2	229.066874811909	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72336002	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72336113_72336433_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.186	chr11	+	3128	10	NIC	ENSMUSG00000040463.17	novel	4014	24	NA	NA	-1664	-220	intron_retention	FALSE	canonical	3	2480	junction_3	172.811393657298	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72337378	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.187	chr11	+	1804	9	NNC	ENSMUSG00000040463.17	novel	4014	24	NA	NA	-257	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	955.36759123125	2640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72338785	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72338959_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.188	chr11	+	1633	8	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	6861	219	-1	-219	3prime_fragment	FALSE	canonical	3	2711	junction_7	121.804795321306	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72339041	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.189	chr11	+	1516	2	NIC	ENSMUSG00000040463.17	novel	856	7	NA	NA	-135	-219	intron_retention	FALSE	canonical	3	2990	junction_1	0	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72340328	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72340921_72341451
ES.5384.190	chr11	+	175	1	Intergenic	novelGene_4217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGCAAAACAAAATA	NA	False	NA	NA	False	NA	NA	NA	72434735	72434910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72434700_72434900
ES.5384.191	chr11	+	180	1	Intergenic	novelGene_4218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTGAA	4826	False	NA	NA	False	NA	NA	NA	72446189	72446369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72446200_72446400
ES.5384.192	chr11	+	360	1	Intergenic	novelGene_4219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACCAAACAAACAAAC	4828	False	NA	NA	False	NA	NA	NA	72446191	72446551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72446200_72446600
ES.5384.193	chr11	+	179	1	Intergenic	novelGene_4222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	72496145	72496324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72496100_72496300
ES.5384.194	chr11	+	174	1	Intergenic	novelGene_4223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	72497059	72497233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72497100_72497200
ES.5384.195	chr11	+	3917	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-101	-1	-101	1	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCTATTTTGGTTTTA	NA	False	NA	12	True	AATAAA	-21	NA	72498007	72577308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.196	chr11	+	2153	7	FSM	ENSMUSG00000020794.14	ENSMUST00000138247.8	3931	7	-89	1867	-89	-1867	multi-exon	FALSE	canonical	3	19	junction_1	366.180017963236	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTTGTTGGCTTTTAT	NA	False	NA	NA	False	AATATA	-18	NA	72498019	72575440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.197	chr11	+	3999	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-79	-1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	False	NA	10	True	AATAAA	-19	NA	72498029	72577306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.198	chr11	+	2070	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-78	1823	-78	-1823	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATACCAGAGAAGTGCAG	NA	False	NA	NA	False	ATTAAA	-16	NA	72498030	72575484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.199	chr11	+	2111	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-64	-1874	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498044	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.2	chr11	+	1737	2	FSM	ENSMUSG00000040471.18	ENSMUST00000108499.2	874	2	-80	-783	-72	164	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGACATCTGTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	72326279	72329390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72326591_72327964
ES.5384.200	chr11	+	3985	7	FSM	ENSMUSG00000020794.14	ENSMUST00000138247.8	3931	7	-55	1	-55	-1	multi-exon	FALSE	canonical	3	19	junction_1	366.180017963236	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	False	NA	10	True	AATAAA	-19	NA	72498053	72577306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.201	chr11	+	1686	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-45	2174	-45	-2174	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGTGAAATTTATTCC	NA	False	NA	11	True	AATAAA	-23	NA	72498063	72575133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.202	chr11	+	1945	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-45	-1874	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	311.35099164769	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498063	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568571_72568710_72570194_72570319_72574349
ES.5384.203	chr11	+	7669	26	Fusion	ENSMUSG00000020790.15_ENSMUSG00000020794.14	novel	3324	23	NA	NA	-45	92	multi-exon	FALSE	canonical	0	0	junction_2	132.896013484228	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGAGGGCTGGAGAG	NA	False	NA	108	True	ATTAAA	-20	NA	72498063	72662139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_72498462_72553896_72554000_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.204	chr11	+	1841	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-45	2019	-45	-2019	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTAGTCCATATTTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	72498063	72575288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.205	chr11	+	3383	1	Genic_Genomic	ENSMUSG00000020794.14	novel	NA	NA	NA	NA	-41	-69516	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAACAAAAATTAGT	NA	False	NA	NA	False	NA	NA	NA	72498067	72501450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_72498100_72501400
ES.5384.206	chr11	+	1877	5	NIC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-39	-1874	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	341.390538826137	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498069	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72498462_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.207	chr11	+	1915	6	NNC	ENSMUSG00000020794.14	novel	1469	5	NA	NA	-31	273	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	378.364586080674	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAACACAACTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	72498077	72571239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194
ES.5384.208	chr11	+	1622	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-28	-2180	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	311.35099164769	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCATCTTAGTGAAATT	NA	False	NA	5	True	AATAAA	-17	NA	72498080	72575127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568571_72568710_72570194_72570319_72574349
ES.5384.209	chr11	+	7623	26	Fusion	ENSMUSG00000020790.15_ENSMUSG00000020794.14	novel	3324	23	NA	NA	-28	0	multi-exon	FALSE	non_canonical	0	0	junction_1	70.4274264757701	735	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	16	True	AATAAA	-17	NA	72498080	72662047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_72498462_72602982_72603176_72605190_72605310_72613453_72613589_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72636163_72636331_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.21	chr11	+	4006	27	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-33	-219	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_26	545.264179226849	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332147	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702_72341947_72342112
ES.5384.210	chr11	+	4104	8	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	390.775315160484	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498080	72577307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72523732_72523878_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.211	chr11	+	3847	6	NIC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-26	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	386.945680942429	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTATTATGAGCTATTT	NA	False	NA	4	True	AATAAA	-13	NA	72498082	72577300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72498462_72536362_72536479_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.214	chr11	+	2178	8	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	-16	-1874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	388.848640612414	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498092	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72531621_72531722_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568715_72570194_72570319_72574349
ES.5384.216	chr11	+	3788	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	311.35099164769	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	False	NA	10	True	AATAAA	-19	NA	72498093	72577306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568571_72568710_72570194_72570319_72574349
ES.5384.217	chr11	+	1857	5	NIC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-14	-1874	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	342.710154503773	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498094	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72498462_72553896_72554000_72568530_72568710_72570194_72570319_72574349
ES.5384.218	chr11	+	1201	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-14	2628	-14	-2628	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAAGACTTTAGCGGGTT	NA	False	NA	NA	False	NA	NA	NA	72498094	72574679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.219	chr11	+	3818	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	319.334683365274	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATGAGCTATTTTGG	NA	False	NA	7	True	AATAAA	-16	NA	72498094	72577303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570312_72574349
ES.5384.221	chr11	+	7444	25	Fusion	ENSMUSG00000020790.15_ENSMUSG00000020794.14	novel	3324	23	NA	NA	-12	3	multi-exon	FALSE	canonical	0	0	junction_1	54.7585451220984	735	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72498096	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_72498462_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.222	chr11	+	4493	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	-9	-669	-9	669	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATGTTGCTCCTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	72498099	72577976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.223	chr11	+	5778	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-7	-2181	intron_retention	FALSE	canonical	3	25	junction_2	378.364586080674	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCATCTTAGTGAAAT	NA	False	NA	4	True	AATAAA	-16	NA	72498101	72575126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194
ES.5384.224	chr11	+	3680	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	304.952061806442	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	False	NA	10	True	AATAAA	-19	NA	72498101	72577306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568671_72568710_72570194_72570319_72574349
ES.5384.225	chr11	+	3713	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	318.585247618279	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTATTATGAGCTATTT	NA	False	NA	4	True	AATAAA	-13	NA	72498101	72577300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72498360_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ES.5384.226	chr11	+	1643	5	NIC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	83	-1874	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	340.792733930757	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTCAAGTTGTTGG	NA	False	NA	NA	False	AATATA	-11	NA	72498227	72575433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72498462_72553896_72554000_72563785_72563884_72570194_72570319_72574349
ES.5384.227	chr11	+	3851	1	Intergenic	novelGene_4224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTATTTTGAAAGGT	NA	False	NA	NA	False	AGTAAA	-22	NA	72498770	72502621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72498800_72502600
ES.5384.228	chr11	+	168	1	Intergenic	novelGene_4225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	379	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	72502981	72503149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72503000_72503100
ES.5384.229	chr11	+	167	1	Intergenic	novelGene_4226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	72512632	72512799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72512600_72512800
ES.5384.230	chr11	+	156	1	Intergenic	novelGene_4231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGAAAAAAAAAGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	72558554	72558710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72558600_72558700
ES.5384.231	chr11	+	173	1	Intergenic	novelGene_4232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	72569746	72569919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72569700_72569900
ES.5384.232	chr11	+	1489	1	NIC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	75650	-2024	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTCTCCTTAGTCCATA	NA	False	NA	NA	False	ATTAAA	-19	NA	72573794	72575283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72573800_72575300
ES.5384.233	chr11	+	5222	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	-30	2838	-30	1555	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTCCCCCAGCCTGTG	NA	False	NA	NA	False	TTTAAA	-24	NA	72580801	72660134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.234	chr11	+	4022	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	-17	4025	-17	368	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAAGTCTTTTCTTTCTT	NA	False	NA	6	True	CATAAA	-19	NA	72580814	72658947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.235	chr11	+	7162	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	-17	885	-17	40	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAAGTCAGAAGTACC	NA	False	NA	56	True	ATTAAA	-14	NA	72580814	72662087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.236	chr11	+	6989	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	-17	3	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580814	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.237	chr11	+	7418	25	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	-5	286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	64.278041870196	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGTTTGTGGACAAA	NA	False	NA	NA	False	AATACA	-4	NA	72580826	72662333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605301_72613453_72613588_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645129_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.238	chr11	+	5088	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	2942	0	1451	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGCTACTTTCTAAAAA	NA	False	NA	97	True	TATAAA	-16	NA	72580831	72660030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.239	chr11	+	7389	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	1	640	1	285	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGGTTTGTGGACAA	NA	False	NA	NA	False	AATACA	-3	NA	72580832	72662332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.24	chr11	+	4383	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-21	-4	-21	4	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGACCTGGTTCTTGT	NA	False	NA	23	True	AATAAA	-36	NA	72332159	72342598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.240	chr11	+	7206	28	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	1	26466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.4168734645673	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTACTCTTTCAGAG	NA	False	NA	NA	False	AAAACA	-14	NA	72580832	72689438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602980_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338_72662057_72668350_72668376_72674895_72674939_72689415
ES.5384.241	chr11	+	3864	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	365	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCAAGTCTTTTCTTT	NA	False	NA	3	True	CATAAA	-16	NA	72580833	72658944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.242	chr11	+	3834	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	365	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	56.061301850897	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCAAGTCTTTTCTTT	NA	False	NA	3	True	CATAAA	-16	NA	72580833	72658944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.243	chr11	+	8422	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	4	intron_retention	FALSE	canonical	0	0	junction_4	42.8106571188642	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTAAACTTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	72580833	72662051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.244	chr11	+	4050	25	FSM	ENSMUSG00000020790.15	ENSMUST00000127610.8	7154	25	2	3102	2	366	multi-exon	FALSE	canonical	0	0	junction_4	54.9122405904792	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAAGTCTTTTCTTTC	NA	False	NA	4	True	CATAAA	-17	NA	72580833	72658945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630933_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.247	chr11	+	5986	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	1368	intron_retention	FALSE	canonical	0	0	junction_4	42.0971062141664	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGGATAGTGGTATGC	NA	False	NA	14	True	AATAAA	-26	NA	72580833	72659947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.248	chr11	+	6871	23	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	48.1939092890583	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580833	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.249	chr11	+	7266	25	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	5403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	46.3469516856886	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGAGCAATGAAGCTCA	NA	False	NA	NA	False	NA	NA	NA	72580833	72668375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338_72662328_72668356
ES.5384.25	chr11	+	5045	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-220	intron_retention	FALSE	canonical	3	2354	junction_10	210.834258864028	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332166	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.250	chr11	+	6905	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	55.8815585164786	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580833	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.251	chr11	+	4665	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	1166	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGGGTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	72580833	72659745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.252	chr11	+	5067	25	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	1375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	54.8784009323239	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGTATGCTCTCTGT	NA	False	NA	21	True	AATAAA	-33	NA	72580833	72659954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637837_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.253	chr11	+	8085	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	42.0971062141664	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTAAAGTGTAAACTT	NA	False	NA	15	True	AATAAA	-16	NA	72580833	72662046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.254	chr11	+	9357	22	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	40	intron_retention	FALSE	canonical	0	0	junction_4	41.3896368770774	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTAAGTCAGAAGTACC	NA	False	NA	56	True	ATTAAA	-14	NA	72580833	72662087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72649427_72650741_72652336_72655602_72655694_72658338
ES.5384.255	chr11	+	3395	6	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.7611987848368	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580833	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619659_72659202
ES.5384.259	chr11	+	3554	3	NNC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTTAAAGTGTAAACT	NA	False	NA	14	True	AATAAA	-15	NA	72580833	72662045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603033_72658568
ES.5384.26	chr11	+	4148	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	746.701049684544	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332166	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336115_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337889_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.262	chr11	+	5096	26	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	2	1368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.0951788966479	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGGATAGTGGTATGC	NA	False	NA	14	True	AATAAA	-26	NA	72580833	72659947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72610915_72611009_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.264	chr11	+	7150	25	FSM	ENSMUSG00000020790.15	ENSMUST00000127610.8	7154	25	3	1	3	-1	multi-exon	FALSE	canonical	0	0	junction_4	54.9122405904792	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTAAAGTGTAAACTT	NA	False	NA	15	True	AATAAA	-16	NA	72580834	72662046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630933_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.265	chr11	+	8024	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	3	3	3	-3	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTTACTTGGACTAAT	NA	False	NA	NA	False	AATAAA	-22	NA	72580834	72662969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.268	chr11	+	5565	16	NNC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.3088253184143	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	16	True	AATAAA	-17	NA	72580837	72662047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603058_72640274_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.269	chr11	+	3549	24	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	6	54	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTCAGACTGTGGT	NA	False	NA	NA	False	NA	NA	NA	72580837	72658633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.270	chr11	+	7025	25	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.8567595587159	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTAAAGTGTAAACTT	NA	False	NA	15	True	AATAAA	-16	NA	72580839	72662046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602984_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649347_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.271	chr11	+	7186	26	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	11	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.0951788966479	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72580842	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72580861_72602982_72603176_72605190_72605310_72610919_72611009_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.272	chr11	+	5341	23	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	-2	365	intron_retention	FALSE	canonical	0	0	junction_3	43.4901195200447	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCAAGTCTTTTCTTT	NA	False	NA	3	True	CATAAA	-16	NA	72602980	72658944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.273	chr11	+	7081	24	ISM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	22149	922	-2	3	3prime_fragment	FALSE	canonical	0	0	junction_3	42.5364071793539	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72602980	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.274	chr11	+	4972	24	ISM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	22149	3031	-2	1362	3prime_fragment	FALSE	canonical	0	0	junction_3	42.5364071793539	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTTCCTTGGATAGTG	NA	False	NA	8	True	AATAAA	-20	NA	72602980	72659941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.275	chr11	+	5219	25	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	-2	1442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.087342744102	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAACCAGTGTGCTACT	NA	False	NA	88	True	TATAAA	-7	NA	72602980	72660021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72636163_72636331_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.276	chr11	+	6731	24	ISM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	22149	1272	-2	-347	3prime_fragment	FALSE	canonical	0	0	junction_3	42.5364071793539	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCGACAACATTGGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	72602980	72661700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.277	chr11	+	7142	25	NNC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.3454085170202	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	16	True	AATAAA	-17	NA	72602980	72662047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72603176_72605190_72605310_72609749_72609814_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.28	chr11	+	4475	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-218	intron_retention	FALSE	canonical	3	2354	junction_11	203.226406311341	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332166	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.280	chr11	+	7074	24	NNC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.8943175758249	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72602980	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72627991_72628121_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.283	chr11	+	189	1	Intergenic	novelGene_4236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAATAACA	3270	False	NA	NA	False	NA	NA	NA	72610669	72610858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_72610700_72610900
ES.5384.285	chr11	+	2760	17	NNC	ENSMUSG00000020790.15	novel	3324	23	NA	NA	-19879	365	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.3720929359067	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCAAGTCTTTTCTTT	NA	False	NA	3	True	CATAAA	-16	NA	72630862	72658944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649350_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.286	chr11	+	5513	14	NNC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	-10590	0	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_7	52.5861367201274	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	16	True	AATAAA	-17	NA	72640151	72662047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648195_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.287	chr11	+	5135	11	ISM	ENSMUSG00000020790.15	ENSMUST00000102548.11	3324	23	39906	-3632	-7853	-1	3prime_fragment	FALSE	canonical	3	180	junction_1	18.8204675818642	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTAAAGTGTAAACTT	NA	False	NA	15	True	AATAAA	-16	NA	72642888	72662046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ES.5384.288	chr11	+	4778	2	FSM	ENSMUSG00000020790.15	ENSMUST00000132889.2	642	2	-2665	-1471	1886	1471	multi-exon	FALSE	canonical	3	204	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGTGATTTATATGT	NA	False	NA	117	True	TATAAA	-36	NA	72652627	72660050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72655694_72658338
ES.5384.289	chr11	+	3717	1	NIC	ENSMUSG00000020790.15	novel	8030	25	NA	NA	3041	3	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGTGTAAACTTTAAT	NA	False	NA	19	True	AATAAA	-20	NA	72658333	72662050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72658300_72662000
ES.5384.290	chr11	+	2720	1	ISM	ENSMUSG00000020790.15	ENSMUST00000127610.8	7154	25	77550	946	3089	-946	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTCCAGTCTGAATATT	NA	False	NA	NA	False	NA	NA	NA	72658381	72661101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72658400_72661100
ES.5384.291	chr11	+	5222	1	Antisense	novelGene_ENSMUSG00000057778.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72663128	72668350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_72663100_72668400
ES.5384.292	chr11	+	6363	36	ISM	ENSMUSG00000055670.15	ENSMUST00000069395.7	11150	55	-45	37471	-45	-29247	5prime_fragment	FALSE	canonical	1	2	junction_13	2.82986983186614	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCACACCTGAATTCC	NA	False	NA	NA	False	AATAAA	-19	NA	72687006	72780475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822
ES.5384.293	chr11	+	11378	55	NNC	ENSMUSG00000055670.15	novel	11306	55	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	4.39587660638307	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATTTCTCCCTTTTCT	NA	False	NA	11	True	TATAAA	-15	NA	72687006	72817946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749159_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790608_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ES.5384.294	chr11	+	3726	20	NNC	ENSMUSG00000055670.15	novel	11150	55	NA	NA	-42	15867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.44646432499893	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTTCTGTTTGCAGGC	NA	False	NA	NA	False	AATAAA	-22	NA	72687009	72758073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72735191_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429
ES.5384.295	chr11	+	10640	55	NNC	ENSMUSG00000055670.15	novel	11306	55	NA	NA	-23	-590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	4.43722407322354	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCCTCTCCACTCACTG	NA	False	NA	NA	False	AATAAA	-13	NA	72687028	72817354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760627_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790608_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ES.5384.297	chr11	+	6172	36	ISM	ENSMUSG00000055670.15	ENSMUST00000069395.7	11150	55	-10	37627	-10	-29403	5prime_fragment	FALSE	canonical	1	2	junction_13	2.82986983186614	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAGTCCATGAATCTA	NA	False	NA	NA	False	NA	NA	NA	72687041	72780319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822
ES.5384.298	chr11	+	4651	6	ISM	ENSMUSG00000055670.15	ENSMUST00000207107.2	11306	55	119038	15	349	-15	intron_retention	FALSE	canonical	3	11	junction_4	3.66606055596467	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTACAACTCTGTGT	9855	False	NA	-6	True	AATATA	-18	NA	72806117	72817929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935
ES.5384.299	chr11	+	3436	6	ISM	ENSMUSG00000055670.15	ENSMUST00000152481.8	2800	9	3828	-1307	1181	-1	3prime_fragment	FALSE	canonical	3	11	junction_3	4.36348484585429	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGATTTCTCCCTTT	NA	False	NA	8	True	TATAAA	-12	NA	72806949	72817943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ES.5384.3	chr11	+	2503	3	NIC	ENSMUSG00000040471.18	novel	1818	4	NA	NA	-9	2	intron_retention	FALSE	canonical	2	5	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTCTGAGTGCCAC	NA	False	NA	NA	False	AATAAA	-16	NA	72326342	72329228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72327468_72327544_72327659_72327964
ES.5384.30	chr11	+	3402	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	758.612915494823	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332166	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341535_72342091
ES.5384.33	chr11	+	4229	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-216	intron_retention	FALSE	canonical	3	2354	junction_12	205.106408697751	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	48	True	AATAAA	-18	NA	72332166	72342378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.34	chr11	+	2475	18	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-14	3688	-14	-2626	5prime_fragment	FALSE	canonical	3	2354	junction_12	157.900279511774	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCTACAGAAGGAGAAGA	NA	False	NA	NA	False	TTTAAA	-42	NA	72332166	72338906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781
ES.5384.35	chr11	+	3687	23	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-14	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	568.805267045042	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332166	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339706_72340884_72340921_72341451_72341601_72341702
ES.5384.36	chr11	+	4503	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-10	-219	intron_retention	FALSE	canonical	3	2354	junction_12	203.68732420469	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332170	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.37	chr11	+	4001	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-10	-218	combination_of_known_splicesites	FALSE	canonical	3	37	junction_24	551.711502143305	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332170	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.38	chr11	+	4041	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-10	-219	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	565.590319685744	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332170	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.39	chr11	+	4246	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-10	-220	intron_retention	FALSE	canonical	2	4	junction_16	564.013051464434	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332170	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338530_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.4	chr11	+	1511	2	FSM	ENSMUSG00000040471.18	ENSMUST00000108499.2	874	2	-16	-621	-8	2	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTCTGAGTGCCAC	NA	False	NA	NA	False	AATAAA	-16	NA	72326343	72329228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72326591_72327964
ES.5384.40	chr11	+	4134	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.4686983019	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332171	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332389_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.43	chr11	+	4257	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-219	intron_retention	FALSE	canonical	1	1	junction_6	566.071396900505	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332171	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334491_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.44	chr11	+	5008	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-214	intron_retention	FALSE	canonical	3	2360	junction_7	200.813510789744	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332171	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.45	chr11	+	4139	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	556.426095721615	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332171	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338386_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.46	chr11	+	5720	22	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-218	intron_retention	FALSE	canonical	0	0	junction_7	603.178918113221	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332171	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334737_72334828_72336113_72336433_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.47	chr11	+	4174	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-9	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	745.537287062156	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332171	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336115_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338530_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.49	chr11	+	3876	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-8	-219	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	759.359460289101	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332172	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338530_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.5	chr11	+	1777	4	FSM	ENSMUSG00000040471.18	ENSMUST00000076443.10	1818	4	43	-2	35	2	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTCTGAGTGCCAC	NA	False	NA	NA	False	AATAAA	-16	NA	72326394	72329228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72326591_72327264_72327468_72327544_72327659_72327964
ES.5384.50	chr11	+	4146	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-8	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	555.551234720975	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATCTCTGACTCAACCT	NA	False	NA	52	True	AATAAA	-22	NA	72332172	72342382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337982_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.51	chr11	+	4762	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-8	-219	intron_retention	FALSE	canonical	3	2360	junction_7	197.407557610272	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332172	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.53	chr11	+	4371	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-8	-218	intron_retention	FALSE	canonical	2	4	junction_15	566.741035254786	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332172	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338530_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.54	chr11	+	4254	25	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	-8	214	-8	-214	intron_retention	FALSE	canonical	3	2354	junction_12	207.732383261627	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332172	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451
ES.5384.55	chr11	+	4099	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-5	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	555.159868866618	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332175	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336838_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.56	chr11	+	4982	23	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	-5	-218	intron_retention	FALSE	canonical	0	0	junction_11	591.23647748938	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332175	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337982_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.58	chr11	+	3895	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-214	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	578.785205235605	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332180	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.59	chr11	+	7195	16	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	4	intron_retention	FALSE	canonical	3	2385	junction_7	160.981241143184	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGACCTGGTTCTTGT	NA	False	NA	23	True	AATAAA	-36	NA	72332180	72342598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333471_72333571_72333680_72334301_72334478_72334566_72336560_72336719_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72341601_72341702
ES.5384.6	chr11	+	6591	30	Fusion	ENSMUSG00000040471.18_ENSMUSG00000040463.17	novel	4358	26	NA	NA	35	-207	multi-exon	FALSE	canonical	1	1	junction_4	928.18411315813	2654	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72326394	72342387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_72326591_72327264_72327468_72327544_72327659_72327964_72329546_72331834_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.60	chr11	+	4238	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-215	intron_retention	FALSE	canonical	3	2360	junction_7	199.587069380481	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCAATCTCTGACTCAA	NA	False	NA	49	True	AATAAA	-19	NA	72332181	72342379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.62	chr11	+	5322	22	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-216	intron_retention	FALSE	canonical	3	2354	junction_8	208.820334193749	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	48	True	AATAAA	-18	NA	72332181	72342378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333680_72334301_72334478_72334566_72334735_72334828_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.63	chr11	+	4116	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	556.244426848485	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332181	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338576_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.64	chr11	+	4154	26	NNC	ENSMUSG00000040463.17	novel	4448	25	NA	NA	1	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	742.131229365804	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCCAATCTCTGACTCAA	NA	False	NA	49	True	AATAAA	-19	NA	72332181	72342379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338487_72338568_72338713_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.65	chr11	+	4052	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-220	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	564.990079497468	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332182	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.66	chr11	+	4073	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-214	intron_retention	FALSE	canonical	3	37	junction_23	562.912172031792	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332182	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.67	chr11	+	6320	19	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-219	intron_retention	FALSE	canonical	0	0	junction_10	634.903890850642	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332182	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72337895_72337982_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340921_72341451_72341601_72341702
ES.5384.7	chr11	+	2439	2	NIC	ENSMUSG00000040471.18	novel	1818	4	NA	NA	206	164	intron_retention	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGACATCTGTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	72326645	72329390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72327659_72327964
ES.5384.70	chr11	+	4616	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-220	intron_retention	FALSE	canonical	3	2354	junction_11	186.682782408119	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332182	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340921_72341451_72341601_72341702
ES.5384.72	chr11	+	4129	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	555.795694837591	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332182	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333303_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.74	chr11	+	3979	25	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	742.551081997057	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATATGACGCCAATCTCT	NA	False	NA	42	True	AATAAA	-12	NA	72332182	72342372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332594_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
ES.5384.78	chr11	+	4109	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	740.789876820681	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332183	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332595_72333225_72333310_72333395_72333471_72333592_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.79	chr11	+	5333	20	NIC	ENSMUSG00000040463.17	novel	4448	25	NA	NA	1	-220	intron_retention	FALSE	canonical	3	2385	junction_10	181.069720735724	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332183	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340921_72341451_72341601_72341702
ES.5384.80	chr11	+	4121	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	1	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	555.241257833025	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332183	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334720_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.81	chr11	+	3843	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	3	-214	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	565.507071807143	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAATCTCTGACTCAAC	NA	False	NA	50	True	AATAAA	-20	NA	72332185	72342380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.83	chr11	+	4649	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-220	intron_retention	FALSE	canonical	3	2354	junction_10	203.586212538393	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332188	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.85	chr11	+	3877	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	556.344707533019	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332188	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335761_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.86	chr11	+	4120	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	552.11579365202	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332188	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340097_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.87	chr11	+	4234	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-218	intron_retention	FALSE	canonical	3	2354	junction_11	204.882266327654	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332188	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.88	chr11	+	4222	25	NNC	ENSMUSG00000040463.17	novel	4448	25	NA	NA	6	-220	intron_retention	FALSE	canonical	0	0	junction_10	567.215494029092	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332188	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336115_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.89	chr11	+	4106	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-219	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	552.730395039028	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGACGCCAATCTCTGAC	NA	False	NA	45	True	AATAAA	-15	NA	72332188	72342375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339812_72339915_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.90	chr11	+	4080	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-216	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	556.137614624294	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCCAATCTCTGACTCA	NA	False	NA	48	True	AATAAA	-18	NA	72332188	72342378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334491_72334633_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.91	chr11	+	4115	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	6	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	552.11579365202	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332188	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72339986_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.94	chr11	+	5109	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	8	2	intron_retention	FALSE	canonical	3	2354	junction_10	206.546112978166	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGACCTGGTTCTT	NA	False	NA	21	True	AATAAA	-34	NA	72332190	72342596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.95	chr11	+	4288	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	8	-220	intron_retention	FALSE	canonical	3	2354	junction_11	204.282416168293	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACGCCAATCTCTGA	NA	False	NA	44	True	AATAAA	-14	NA	72332190	72342374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.98	chr11	+	4119	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	8	-217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	746.714752499239	2641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGCCAATCTCTGACTC	NA	False	NA	47	True	AATAAA	-17	NA	72332190	72342377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335512_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339049_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5384.99	chr11	+	4380	24	NIC	ENSMUSG00000040463.17	novel	4448	25	NA	NA	8	-218	intron_retention	FALSE	canonical	3	2354	junction_11	208.504976299792	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGCCAATCTCTGACT	NA	False	NA	46	True	AATAAA	-16	NA	72332190	72342376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ES.5385.1	chr11	-	339	1	Intergenic	novelGene_4216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	72331690	72331351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72331400_72331700
ES.5386.1	chr11	-	3330	13	FSM	ENSMUSG00000040447.16	ENSMUST00000045303.10	3241	13	-89	0	-89	0	multi-exon	FALSE	canonical	0	0	junction_9	1.44096803881588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCTCTCCAGTGGAA	NA	False	NA	-1	True	AATAAA	-19	NA	72380819	72342463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72343942_72344379_72344427_72344879_72345044_72345125_72345225_72347128_72347195_72347325_72347516_72347600_72347754_72348030_72348174_72349458_72349526_72349727_72349880_72354468_72354606_72365530_72365597_72380251
ES.5386.3	chr11	-	3400	14	NNC	ENSMUSG00000040447.16	novel	3241	13	NA	NA	-65	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1.63540704811302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGGCTCTCCAGTGG	NA	False	NA	-3	True	AATAAA	-17	NA	72380795	72342465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72343942_72344379_72344427_72344879_72345044_72345125_72345225_72347128_72347195_72347325_72347516_72347600_72347754_72347847_72347944_72348030_72348174_72349458_72349526_72349727_72349880_72354468_72354606_72365530_72365597_72380251
ES.5387.1	chr11	-	1625	9	NIC	ENSMUSG00000020798.15	novel	1804	11	NA	NA	9448	8	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	5.87367006223537	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTTAGACCATCTTGT	9568	False	NA	NA	False	ATTAAA	-32	NA	72431679	72388972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72389301_72390180_72390353_72390463_72390563_72395881_72395948_72427353_72427507_72427996_72428146_72429149_72429217_72429860_72430013_72431240
ES.5387.2	chr11	-	1322	8	NNC	ENSMUSG00000020798.15	novel	1804	11	NA	NA	12207	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	5.67845911838623	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTCAGAGCTTCTTAG	NA	False	NA	NA	False	ATTAAA	-22	NA	72428920	72388982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72389301_72390180_72390353_72390463_72390563_72395881_72395948_72420359_72420550_72427353_72427507_72427996_72428146_72428745
ES.5387.3	chr11	-	1431	9	NNC	ENSMUSG00000020798.15	novel	1804	11	NA	NA	11840	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.45658578507248	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATTTCAGAGCTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	72429287	72388984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72389301_72390180_72390353_72390463_72390563_72393077_72393226_72395881_72395948_72420359_72420550_72427353_72427507_72427996_72428146_72429149
ES.5387.4	chr11	-	1846	11	NNC	ENSMUSG00000020798.15	novel	1804	11	NA	NA	8175	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	5.66127194188726	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGATTTCAGAGCTTCT	8295	False	NA	NA	False	ATTAAA	-19	NA	72432952	72388985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_72389301_72390180_72390353_72390463_72390563_72395881_72395948_72420359_72420550_72427353_72427507_72427996_72428146_72429149_72429217_72429860_72430013_72431240_72431483_72432711
ES.5387.5	chr11	-	1256	7	NIC	ENSMUSG00000020798.15	novel	1804	11	NA	NA	11794	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.42261628933256	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCCCTCAGATTTCAGA	NA	False	NA	NA	False	ATTAAA	-13	NA	72429333	72388991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_72389301_72390180_72390353_72390463_72390563_72420359_72420550_72427353_72427507_72427996_72428146_72429149
ES.5388.1	chr11	-	5265	4	Intergenic	novelGene_4220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTATGTGTGTGTGTGT	7624	False	NA	NA	False	AATAAA	-19	NA	72467432	72447812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72452481_72461642_72462041_72464958_72465030_72467304
ES.5389.1	chr11	-	228	1	Intergenic	novelGene_4221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTTCTTTGCCAGGAG	2078	False	NA	NA	False	NA	NA	NA	72487888	72487660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72487700_72487900
ES.539.1	chr1	+	8481	9	Antisense	novelGene_ENSMUSG00000026028.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58944997	58966994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_58947948_58949107_58950996_58951345_58951421_58954843_58954983_58957930_58958006_58958379_58958509_58960230_58960311_58960837_58962798_58965809
ES.539.2	chr1	+	3230	4	Antisense	novelGene_ENSMUSG00000026028.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58958593	58966994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_58960311_58960837_58961047_58962678_58962798_58965809
ES.5390.1	chr11	-	995	1	Antisense	novelGene_ENSMUSG00000020794.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACGTTTAAGTAAATA	3826	False	NA	NA	False	AATAAA	-21	NA	72498617	72497622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72497600_72498600
ES.5391.1	chr11	-	8008	1	Intergenic	novelGene_4227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTTGTTTCAGATTAA	4699	False	NA	NA	False	NA	NA	NA	72535855	72527847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72527800_72535900
ES.5391.2	chr11	-	2858	1	Intergenic	novelGene_4228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGAAGTCGGGCGGTG	4699	False	NA	NA	False	TATAAA	-31	NA	72535855	72532997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72533000_72535900
ES.5392.1	chr11	-	177	1	Intergenic	novelGene_4229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATATATATA	2546	False	NA	NA	False	NA	NA	NA	72538008	72537831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72537800_72538000
ES.5393.1	chr11	-	208	1	Intergenic	novelGene_4230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGGTTTTTTAGACAG	2349	False	NA	NA	False	AATAAA	-1	NA	72547910	72547702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72547700_72547900
ES.5394.1	chr11	-	3010	1	Intergenic	novelGene_4233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAGCTATTAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	72592963	72589953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72590000_72593000
ES.5395.1	chr11	-	311	1	Intergenic	novelGene_4234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTATACAGCACTGCTT	NA	False	NA	NA	False	NA	NA	NA	72608838	72608527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72608500_72608800
ES.5395.2	chr11	-	199	1	Intergenic	novelGene_4235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	72608837	72608638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72608600_72608800
ES.5396.1	chr11	-	289	1	Intergenic	novelGene_4237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCTCAAAAAGACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	72628481	72628192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72628200_72628500
ES.5397.1	chr11	-	2767	1	Intergenic	novelGene_4238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72635907	72633140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72633100_72635900
ES.5398.1	chr11	-	3907	5	Antisense	novelGene_ENSMUSG00000020790.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTTGCCTAGGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	72660497	72649446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72650831_72651063_72651189_72652186_72652334_72655600_72655691_72658336
ES.5398.2	chr11	-	2184	1	Antisense	novelGene_ENSMUSG00000020790.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTTGCCTAGGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	72651630	72649446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72649400_72651600
ES.5399.1	chr11	-	5001	1	Antisense	novelGene_ENSMUSG00000020790.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTACCTCATTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	72667048	72662047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72662000_72667000
ES.54.1	chr1	-	205	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATTAAAATTTGATATA	NA	False	NA	NA	False	AATAAA	-18	NA	8925619	8925414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_8925400_8925600
ES.540.1	chr1	-	7453	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-1	-1263	-1	1263	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTGGCTTCTGAGTCT	1546	False	NA	NA	False	NA	NA	NA	59012590	58938344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.12	chr1	-	6150	17	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	18.744061559598	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCCTGTGTCTCCTT	1626	False	NA	-8	True	AATAAA	-33	NA	59012510	58939615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_58992724_58992773_59012395
ES.540.13	chr1	-	5482	13	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-1890	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.4265282306014	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCCTGTGTCTCCTT	9949	False	NA	-8	True	AATAAA	-33	NA	58962746	58939615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947399_58947507_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680
ES.540.14	chr1	-	7838	15	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	68	-10	intron_retention	FALSE	canonical	1	1	junction_13	15.4212945802424	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATTGTCCTGTGTCTCC	1616	False	NA	-10	True	AATAAA	-31	NA	59012520	58939617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975117_58985405_58985695_59012395
ES.540.16	chr1	-	4294	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-51	1946	-51	1109	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCAGAAGTAGAGAAGGG	1496	False	NA	NA	False	ATTAAA	-22	NA	59012640	58941553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.17	chr1	-	4041	17	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	72	1028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	17.6170194698195	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTGCTTTGAAAGTGT	1620	False	NA	NA	False	ATTAAA	-23	NA	59012516	58941634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949162_58949203_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.18	chr1	-	4209	16	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-53	1028	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	13.2839083940767	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTGCTTTGAAAGTGT	1494	False	NA	NA	False	ATTAAA	-23	NA	59012642	58941634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.19	chr1	-	5820	15	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	68	1027	intron_retention	FALSE	canonical	1	1	junction_13	15.4212945802424	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTTGCTTTGAAAGTG	1616	False	NA	NA	False	ATTAAA	-22	NA	59012520	58941635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975117_58985405_58985695_59012395
ES.540.2	chr1	-	6239	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	-50	0	-50	0	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTGTGATTTT	1497	False	NA	0	True	AATAAA	-41	NA	59012639	58939607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.20	chr1	-	4319	17	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-53	1025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.754582773285	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGCTTGCTTTGAAAG	1494	False	NA	NA	False	ATTAAA	-20	NA	59012642	58941637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947399_58947507_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.4	chr1	-	6224	16	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	13.2839083940767	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCCTTGTGATTT	1505	False	NA	-1	True	AATAAA	-40	NA	59012631	58939608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.5	chr1	-	6213	17	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	75	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.754582773285	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCCTTGTGATTT	1623	False	NA	-1	True	AATAAA	-40	NA	59012513	58939608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947399_58947507_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ES.540.6	chr1	-	6143	17	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.5300846320711	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTCCTTGTGATT	1616	False	NA	-2	True	AATAAA	-39	NA	59012520	58939609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59000462_59000494_59012395
ES.5400.1	chr11	-	2139	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	35	-16	-13	-1	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTTTTTTTTCTTTT	NA	False	NA	-1	True	AATAAA	-35	NA	72686933	72668058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
ES.5400.2	chr11	-	2362	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	30	1	15	-1	multi-exon	FALSE	canonical	2	5	junction_3	4.02768199119819	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGCTTTTTTTTCTTTT	NA	False	NA	-1	True	AATAAA	-35	NA	72686652	72668058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
ES.5400.3	chr11	-	1446	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	38	909	23	737	multi-exon	FALSE	canonical	2	5	junction_3	4.02768199119819	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGGGGCTTGACTTA	NA	False	NA	NA	False	AATAAA	-11	NA	72686644	72668966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
ES.5400.4	chr11	-	172	1	Intergenic	novelGene_4239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAATCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	72671582	72671410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72671400_72671600
ES.5400.5	chr11	-	893	1	FSM	ENSMUSG00000057778.15	ENSMUST00000169476.2	2953	1	-199	2259	54	-2259	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGATGCACTTGTCTGCT	NA	False	NA	NA	False	AATATA	-24	NA	72686866	72685973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_72686000_72686900
ES.5401.1	chr11	-	201	1	Intergenic	novelGene_4240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAAAGAAGAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	72705804	72705603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_72705600_72705800
ES.5402.1	chr11	-	6246	1	Antisense	novelGene_ENSMUSG00000055670.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGACATGAACACAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	72715832	72709586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72709600_72715800
ES.5402.2	chr11	-	5691	2	Antisense	novelGene_ENSMUSG00000055670.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72715832	72709618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72714377_72714899
ES.5403.1	chr11	-	3361	1	Antisense	novelGene_ENSMUSG00000084329.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGTTAGATGTGGTG	NA	False	NA	NA	False	NA	NA	NA	72726937	72723576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72723600_72726900
ES.5404.1	chr11	-	178	1	Antisense	novelGene_ENSMUSG00000055670.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGTCCCTATA	NA	False	NA	NA	False	NA	NA	NA	72812684	72812506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72812500_72812700
ES.5405.1	chr11	-	1556	5	Antisense	novelGene_ENSMUSG00002075500.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATTTTAGTCAGCT	NA	False	NA	NA	False	ATTAAA	-44	NA	72845572	72819684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72820613_72820763_72820958_72825819_72825854_72826406_72826549_72845314
ES.5406.1	chr11	+	4472	21	NNC	ENSMUSG00000020788.16	novel	816	2	NA	NA	-686	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5224433263604	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTAGTCTTTTCTGAGC	NA	False	NA	23	True	AATAAA	-23	NA	72851308	72883870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72851494_72861659_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.10	chr11	+	4617	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.1331982109317	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72852001	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863284_72863450_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5406.13	chr11	+	4744	22	NNC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	30.8420009879922	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852012	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852298_72861421_72861601_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
ES.5406.14	chr11	+	4463	20	NIC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	18	-11	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.8645932630877	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGATTGGAGCTGGTAG	NA	False	NA	11	True	AATAAA	-11	NA	72852012	72883858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72852298_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.15	chr11	+	4522	21	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.8934031198044	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852013	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852304_72861564_72861603_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5406.17	chr11	+	3477	20	NNC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	24	-3228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.9689469524302	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTCATGCTAACTGAATA	NA	False	NA	NA	False	AATAAA	-33	NA	72852018	72880641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300
ES.5406.19	chr11	+	4517	21	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.6379250251855	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852025	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873484_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.2	chr11	+	4469	20	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	-24	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.5726582440654	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGATTGGAGCTGGTAG	NA	False	NA	11	True	AATAAA	-11	NA	72851970	72883858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.20	chr11	+	4550	21	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5224433263604	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72852032	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852304_72861662_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.21	chr11	+	5508	20	NNC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	41	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	32.6310696055325	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852035	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
ES.5406.23	chr11	+	5005	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	48	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.7940081617262	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72852042	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852304_72861667_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72872905_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5406.25	chr11	+	4894	22	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	52	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1689825875876	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGCTGGTAGTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	72852046	72883863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852298_72852500_72852875_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.27	chr11	+	4461	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	52	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1492052105957	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGCTGGTAGTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	72852046	72883863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852304_72861662_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5406.29	chr11	+	4158	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	32	-204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1492052105957	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTCAGCCTACCTTGC	NA	False	NA	NA	False	NA	NA	NA	72852147	72883665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5406.30	chr11	+	4498	21	ISM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	9214	5	9093	-5	3prime_fragment	FALSE	canonical	3	72	junction_5	14.9079676683309	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72861208	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.31	chr11	+	3979	18	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	-9677	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.3898953708806	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72863245	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72863284_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.32	chr11	+	4200	12	NIC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	-6854	-5	intron_retention	FALSE	canonical	1	1	junction_10	40.5413776996432	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72866068	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72873653_72874285_72874372_72878799_72878934_72879795_72879914_72882514
ES.5406.33	chr11	+	5312	13	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	-6850	-5	intron_retention	FALSE	canonical	0	0	junction_2	32.4957262147228	228	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72866072	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72866477_72867963_72868025_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.34	chr11	+	3435	15	ISM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	14156	204	-6772	-204	3prime_fragment	FALSE	canonical	3	82	junction_14	12.4533824599535	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTCAGCCTACCTTGC	NA	False	NA	NA	False	NA	NA	NA	72866150	72883665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.36	chr11	+	7044	11	NIC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	-4927	-6	intron_retention	FALSE	canonical	3	94	junction_3	11.4017542509914	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGCTGGTAGTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	72867995	72883863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300
ES.5406.38	chr11	+	9318	3	NIC	ENSMUSG00000020788.16	novel	4467	21	NA	NA	-1298	2133	intron_retention	FALSE	canonical	3	101	junction_1	2.5	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72871624	72886003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72873653_72874285_72874372_72878799
ES.5406.39	chr11	+	1880	6	ISM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	22289	6	1361	-6	3prime_fragment	FALSE	canonical	3	82	junction_5	14.2407864951343	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGAGCTGGTAGTCTTT	NA	False	NA	16	True	AATAAA	-16	NA	72874283	72883863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.4	chr11	+	6738	20	NNC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	-14	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	26.9689469524302	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGCTGGTAGTCTTTT	NA	False	NA	17	True	AATAAA	-17	NA	72851980	72883864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300
ES.5406.5	chr11	+	4586	21	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5224433263604	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTAGTCTTTTCTGAG	NA	False	NA	22	True	AATAAA	-22	NA	72851996	72883869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.6	chr11	+	4464	20	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.5886803251241	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72851996	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879795_72879914_72880300_72880374_72882514
ES.5406.7	chr11	+	4640	22	NNC	ENSMUSG00000020788.16	novel	4593	22	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.0362269372493	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGAGCTGGTAGTCTT	NA	False	NA	15	True	AATAAA	-15	NA	72851996	72883862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852298_72861132_72861200_72861666_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ES.5406.8	chr11	+	4592	21	NNC	ENSMUSG00000020788.16	novel	4606	22	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8117902671321	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72851996	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852304_72861669_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
ES.5406.9	chr11	+	4507	20	NNC	ENSMUSG00000020788.16	novel	4520	21	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.1492052105957	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCTGGTAGTCTTTTC	NA	False	NA	18	True	AATAAA	-18	NA	72851998	72883865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72852308_72861670_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ES.5407.1	chr11	+	3643	17	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	7.21543484483091	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	AATAAA	-29	NA	72909794	72932899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72909954_72910193_72910339_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.10	chr11	+	4258	6	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	7918	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.01997782702374	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72925328	72932889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72927354_72928020_72928095_72928368_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.2	chr11	+	3583	16	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.62627038597505	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72909807	72932889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72918946_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.3	chr11	+	3484	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	-60	0	-25	0	multi-exon	FALSE	canonical	2	15	junction_1	5.11815939137846	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	AATAAA	-29	NA	72909808	72932899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.6	chr11	+	3419	15	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.72915234151633	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72909858	72932889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919096_72921615_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.7	chr11	+	3692	15	FSM	ENSMUSG00000020785.18	ENSMUST00000155720.2	3717	15	26	-1	-9	1	multi-exon	FALSE	canonical	2	15	junction_1	4.90158241837079	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72909859	72932889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.8	chr11	+	3473	17	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.31543577885651	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	AATAAA	-29	NA	72909881	72932899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72909954_72916156_72916219_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5407.9	chr11	+	2672	8	NNC	ENSMUSG00000020785.18	novel	3717	15	NA	NA	4497	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.67555797182227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	72921907	72932889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72922088_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ES.5408.1	chr11	+	2915	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	-61	9252	-61	-9252	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTCATTATTTTGAAT	NA	False	NA	26	True	AATATA	-31	NA	72938547	72970891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.10	chr11	+	12025	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	89	-8	-1	8	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGTGGTTGTCTGCTT	NA	False	NA	12	True	NA	NA	NA	72938697	72980151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.11	chr11	+	1734	10	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	0	-13225	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	96.5861733836106	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGTGGTATTCATT	NA	False	NA	NA	False	NA	NA	NA	72938698	72966918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938909_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440
ES.5408.12	chr11	+	2696	2	ISM	ENSMUSG00000020783.15	ENSMUST00000151823.2	3591	3	5	4388	5	-4388	5prime_fragment	FALSE	canonical	3	280	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGGCTAGGAGATTTA	NA	False	NA	NA	False	NA	NA	NA	72938703	72943175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72938909_72940684
ES.5408.13	chr11	+	4661	12	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	5	-9252	intron_retention	FALSE	canonical	3	251	junction_9	29.5492305279408	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTCATTATTTTGAAT	NA	False	NA	26	True	AATATA	-31	NA	72938703	72970891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.14	chr11	+	2902	13	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	5	-9101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	82.8078431604693	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTGTGTCTCTGACTT	NA	False	NA	10	True	NA	NA	NA	72938703	72971042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957516_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.15	chr11	+	5074	12	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	5	-9261	intron_retention	FALSE	canonical	3	251	junction_9	28.3895569206136	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAAAGGAGTGTCATT	NA	False	NA	17	True	AATATA	-22	NA	72938703	72970882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.16	chr11	+	2729	13	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	5	-9252	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	83.981603474941	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTCATTATTTTGAAT	NA	False	NA	26	True	AATATA	-31	NA	72938703	72970891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72938879_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.17	chr11	+	3004	14	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	5	-9100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.24053591986	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGTCTCTGACTTA	NA	False	NA	11	True	NA	NA	NA	72938703	72971043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72938909_72940684_72940751_72942572_72942666_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.18	chr11	+	4527	12	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	6	-9259	intron_retention	FALSE	canonical	3	251	junction_9	29.8453313208765	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGAGTGTCATTAT	NA	False	NA	19	True	AATATA	-24	NA	72938704	72970884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.2	chr11	+	6398	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	-5	5713	-5	-5713	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACTTCTTTGATAGC	NA	False	NA	NA	False	NA	NA	NA	72938603	72974430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.20	chr11	+	2795	14	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	8	-9259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.450552822101	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGAGTGTCATTAT	NA	False	NA	19	True	AATATA	-24	NA	72938706	72970884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72966970_72967017_72968680_72968843_72969766
ES.5408.23	chr11	+	2546	12	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	25	-9264	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	84.7084450403679	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAAAGAAAGGAGTGTC	NA	False	NA	14	True	AATATA	-19	NA	72938723	72970879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72938909_72940684_72940751_72944248_72944355_72956451_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.25	chr11	+	2537	12	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	114	-9261	combination_of_known_splicesites	FALSE	canonical	2	16	junction_8	83.836815124669	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAAAGGAGTGTCATT	NA	False	NA	17	True	AATATA	-22	NA	72938812	72970882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.26	chr11	+	3883	8	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	15808	-13034	intron_retention	FALSE	canonical	2	2	junction_1	108.651098588509	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTACTTTTCAGTA	7913	False	NA	NA	False	AATAAA	-17	NA	72954506	72967109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72954687_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051
ES.5408.27	chr11	+	6041	11	NNC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	15812	-5769	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	91.6469312088517	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7917	False	NA	NA	False	NA	NA	NA	72954510	72974374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_72954687_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.28	chr11	+	4982	3	ISM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	27831	5713	27741	-5713	3prime_fragment	FALSE	canonical	3	254	junction_1	20.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACTTCTTTGATAGC	5235	False	NA	NA	False	NA	NA	NA	72966439	72974430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72966596_72968680_72968843_72969766
ES.5408.29	chr11	+	3467	2	ISM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	28041	9103	27951	-9103	3prime_fragment	FALSE	canonical	3	295	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGTGTCTCTGAC	5445	False	NA	8	True	NA	NA	NA	72966649	72971040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72968843_72969766
ES.5408.3	chr11	+	2115	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	12	9979	12	-9979	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGTCTCTGTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	72938620	72970164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.4	chr11	+	4774	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	15	7317	15	-7317	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTTACTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	72938623	72972826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.5	chr11	+	2045	11	ISM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	36	13034	36	-13034	5prime_fragment	FALSE	canonical	3	251	junction_10	29.380946206683	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTACTTTTCAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	72938644	72967109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440
ES.5408.6	chr11	+	1905	10	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	-15	-13034	combination_of_known_splicesites	FALSE	canonical	2	16	junction_8	92.0617077002776	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTACTTTTCAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	72938680	72967109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72964051_72964347_72966440
ES.5408.7	chr11	+	4287	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	76	7743	-11	-7743	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATTGCAGATACCTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	72938684	72972400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.8	chr11	+	2992	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	87	9027	0	-9027	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATGTTTATTCTCCT	NA	False	NA	84	True	NA	NA	NA	72938695	72971116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ES.5408.9	chr11	+	4480	1	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	0	-4388	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGGCTAGGAGATTTA	NA	False	NA	NA	False	NA	NA	NA	72938695	72943175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_72938700_72943200
ES.5409.1	chr11	-	5805	1	Antisense	novelGene_ENSMUSG00000020783.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTGGTAGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	72947152	72941347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_72941300_72947200
ES.541.1	chr1	+	3424	11	NIC	ENSMUSG00000026027.14	novel	2960	12	NA	NA	1	-9	intron_retention	FALSE	canonical	3	60	junction_7	9.0581455055657	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012681	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.10	chr1	+	2324	13	NNC	ENSMUSG00000026027.14	novel	2534	13	NA	NA	154	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.1007588675393	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012834	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59029117_59029238_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.11	chr1	+	1771	9	NNC	ENSMUSG00000026027.14	novel	2960	12	NA	NA	-5687	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.0087484692857	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59024529	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033439
ES.541.3	chr1	+	2467	13	NNC	ENSMUSG00000026027.14	novel	2960	12	NA	NA	44	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1007588675393	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTATATATTTTGTGTG	NA	False	NA	19	True	AATAAA	-21	NA	59012724	59034285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59013010_59015013_59015154_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.4	chr1	+	2307	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	51	602	51	-9	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012731	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.5	chr1	+	6487	10	NIC	ENSMUSG00000026027.14	novel	2960	12	NA	NA	55	-9	intron_retention	FALSE	canonical	3	60	junction_6	9.46859656906209	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012735	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59027787_59028848_59028958_59030171_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.6	chr1	+	2903	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	57	0	57	0	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTTTTCTTCATCTAT	NA	False	NA	NA	False	AATAAA	-15	NA	59012737	59034874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.7	chr1	+	2104	11	FSM	ENSMUSG00000026027.14	ENSMUST00000123301.8	2070	11	82	-116	82	-9	multi-exon	FALSE	canonical	1	4	junction_7	23.192455669894	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012762	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.8	chr1	+	3600	10	NIC	ENSMUSG00000026027.14	novel	2960	12	NA	NA	100	-9	intron_retention	FALSE	canonical	3	67	junction_2	7.84258712667613	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAACATCTCTTTTA	NA	False	NA	6	True	AATAAA	-8	NA	59012780	59034272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59031915_59032051_59032297_59032719_59032763_59033451
ES.541.9	chr1	+	1214	7	FSM	ENSMUSG00000026027.14	ENSMUST00000114296.8	1348	7	142	-8	142	8	multi-exon	FALSE	canonical	3	67	junction_2	9.28110386155057	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTGTTTCTATCTT	NA	False	NA	NA	False	AATAAA	-25	NA	59012822	59030679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171
ES.5410.1	chr11	+	168	1	Intergenic	novelGene_4241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7433	False	NA	NA	False	NA	NA	NA	73017243	73017411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_73017200_73017400
ES.5411.1	chr11	-	9219	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-6420	11	6420	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGACTTATGTATA	NA	False	NA	NA	False	NA	NA	NA	73029109	73019890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73019900_73029100
ES.5411.2	chr11	-	2828	2	Genic_Genomic	ENSMUSG00000050107.3	novel	2810	1	NA	NA	11	4604	multi-exon	FALSE	canonical	0	0	junction_1	0	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGCGGTGGTGCACG	NA	False	NA	NA	False	AATACA	-10	NA	73029109	73021706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_73021734_73026308
ES.5411.3	chr11	-	6211	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	11	-3412	11	3412	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTGTCACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	73029109	73022898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73022900_73029100
ES.5411.4	chr11	-	5241	2	Genic_Genomic	ENSMUSG00000050107.3	novel	2810	1	NA	NA	690	3376	multi-exon	FALSE	canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	73028430	73022934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_73023652_73023906
ES.5411.5	chr11	-	5632	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	15	-2837	15	2837	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGACTTCCTAAGAACC	NA	False	NA	NA	False	AATATA	-21	NA	73029105	73023473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73023500_73029100
ES.5411.6	chr11	-	3132	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	-15	-307	-15	307	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGGCTGGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	73029135	73026003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73026000_73029100
ES.5411.7	chr11	-	2849	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	-39	0	-39	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGAGATTTGGCTTAT	NA	False	NA	-7	True	AATAAA	-17	NA	73029159	73026310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73026300_73029200
ES.5411.8	chr11	-	2214	2	Genic_Genomic	ENSMUSG00000050107.3	novel	2810	1	NA	NA	19	-4	multi-exon	FALSE	canonical	1	7	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTTGAGATTTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	73029101	73026314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_73027435_73028007
ES.5411.9	chr11	-	2571	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	-9	248	-9	-248	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGTCTACAAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	73029129	73026558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73026600_73029100
ES.5412.1	chr11	+	793	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47829	6	47829	-6	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTTTTTATGTTGTTT	NA	False	NA	3	True	ATTAAA	-12	NA	73029237	73038266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
ES.5412.2	chr11	+	2431	5	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47844	-1647	47844	1647	3prime_fragment	FALSE	canonical	3	28	junction_3	3.24037034920393	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTATGTGCATGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	73029252	73039919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_73029338_73029592_73029689_73031492_73031589_73036366_73036478_73037876
ES.5412.3	chr11	+	1332	2	ISM	ENSMUSG00000005947.12	ENSMUST00000006101.4	3845	31	47858	7419	47858	5193	internal_fragment	FALSE	canonical	3	37	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGGACCAGAAACTCCAA	NA	False	NA	NA	False	NA	NA	NA	73029266	73030853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_73029338_73029592
ES.5412.4	chr11	+	137	1	Intergenic	novelGene_4242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73030090	73030227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_73030100_73030200
ES.5413.1	chr11	+	161	1	Intergenic	novelGene_4243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTTTAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	73042321	73042482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_73042300_73042500
ES.5414.1	chr11	-	159	1	Intergenic	novelGene_4244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73049093	73048934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_73048900_73049100
ES.5415.1	chr11	+	2584	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	-191	2	-191	-2	multi-exon	FALSE	canonical	2	4	junction_5	3.62476052848859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTGACCTGTGCCC	3177	False	NA	10	True	GATAAA	-20	NA	73051055	73063509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
ES.5415.2	chr11	+	3880	10	NNC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	-175	-2	intron_retention	FALSE	canonical	0	0	junction_9	4.83301403798479	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTGACCTGTGCCC	3193	False	NA	10	True	GATAAA	-20	NA	73051071	73063509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_73051560_73055681_73056438_73056968_73057045_73057130_73057228_73057387_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061320_73061908
ES.5415.3	chr11	+	2774	13	NNC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	-161	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.44097086482474	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTGACCTGTGCCC	3207	False	NA	10	True	GATAAA	-20	NA	73051085	73063509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062370
ES.5415.4	chr11	+	2948	12	NIC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	-26	-6	intron_retention	FALSE	canonical	2	4	junction_4	3.77683237778927	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTTTCTGACCTGT	3342	False	NA	6	True	GATAAA	-16	NA	73051220	73063505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_73051560_73055681_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
ES.5415.5	chr11	+	2395	13	NNC	ENSMUSG00000005950.15	novel	2395	13	NA	NA	-16	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.53612046675228	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGCTGTTTCTGACCT	3352	False	NA	4	True	GATAAA	-14	NA	73051230	73063503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_73051560_73055681_73055833_73056365_73056430_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
ES.5415.6	chr11	+	4978	1	Genic_Genomic	ENSMUSG00000005950.15	novel	NA	NA	NA	NA	9765	2642	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTGGCTGTTATTT	NA	False	NA	NA	False	NA	NA	NA	73061175	73066153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_73061200_73066200
ES.5416.1	chr11	-	2899	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	9	-1576	9	1576	multi-exon	FALSE	canonical	3	946	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAGGAGTTCAAGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	73067854	73064768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73067578_73067764
ES.5416.2	chr11	-	2361	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	12	-1041	12	1041	multi-exon	FALSE	canonical	3	946	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCACGCTTTGATTTGCA	NA	False	NA	NA	False	TTTAAA	-3	NA	73067851	73065303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73067578_73067764
ES.5416.3	chr11	-	1405	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	-59	-14	-59	14	multi-exon	FALSE	canonical	3	946	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTAGTCTTAACTGGG	NA	False	NA	-13	True	AATAAA	-39	NA	73067922	73066330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73067578_73067764
ES.5416.4	chr11	-	719	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	-55	668	-55	149	multi-exon	FALSE	canonical	3	946	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCTTAGCCAAGCTTT	NA	False	NA	-13	True	ATTAAA	-22	NA	73067918	73067012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73067578_73067764
ES.5416.5	chr11	-	665	2	FSM	ENSMUSG00000047260.5	ENSMUST00000108480.2	563	2	45	-147	45	147	multi-exon	FALSE	canonical	3	27	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGCTTAGCCAAGCT	NA	False	NA	-15	True	ATTAAA	-20	NA	73067783	73067014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73067578_73067681
ES.5417.1	chr11	+	1249	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	168	106	0	-1	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGGTTTCTGTTAGAT	4376	False	NA	NA	False	AATAAA	-15	NA	73068076	73072872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ES.5417.2	chr11	+	1470	3	NIC	ENSMUSG00000040158.13	novel	1523	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	98	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGGTTTCTGTTAGAT	4377	False	NA	NA	False	AATAAA	-15	NA	73068077	73072872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_73068169_73071214_73071635_73071913
ES.5418.1	chr11	-	3066	12	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	5	403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	23.121311410089	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCGCTCACTCAGTGA	4470	False	NA	NA	False	NA	NA	NA	73089863	73074018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088023_73089743
ES.5418.10	chr11	-	2716	12	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	25.7717251689098	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4484	False	NA	-1	True	ATTAAA	-23	NA	73089849	73074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079631_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ES.5418.11	chr11	-	2703	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	19	1	-2	-1	multi-exon	FALSE	canonical	3	14	junction_11	20.3534877308514	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCGGAACGTTTACTA	4484	False	NA	-2	True	ATTAAA	-22	NA	73089849	73074423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ES.5418.12	chr11	-	3652	10	NNC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-3	-1	intron_retention	FALSE	canonical	0	0	junction_9	21.540659228538	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCGGAACGTTTACTA	4483	False	NA	-2	True	ATTAAA	-22	NA	73089850	73074423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089703
ES.5418.13	chr11	-	3730	11	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	3	-5	intron_retention	FALSE	canonical	3	14	junction_10	21.2847363150216	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACACTCGGAACGTTT	4515	False	NA	-6	True	ATTAAA	-18	NA	73089818	73074427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73077114_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ES.5418.15	chr11	-	2580	11	NNC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	-277	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	20.5876176377938	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACTCGGAACGTT	4188	False	NA	-7	True	ATTAAA	-17	NA	73090145	73074428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73090003
ES.5418.17	chr11	-	6533	6	NIC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	5	-6	intron_retention	FALSE	canonical	3	46	junction_5	10.295630140987	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACTCGGAACGTT	4470	False	NA	-7	True	ATTAAA	-17	NA	73089863	73074428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73079388_73079514_73079619_73082503_73083960_73087463_73087544_73089743
ES.5418.19	chr11	-	2986	12	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	22.9112553090116	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACTCGGAACGTT	4469	False	NA	-7	True	ATTAAA	-17	NA	73089864	73074428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089470
ES.5418.2	chr11	-	2970	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	3	-403	3	403	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCGCTCACTCAGTGA	4468	False	NA	NA	False	NA	NA	NA	73089865	73074018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5418.20	chr11	-	2827	13	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	27.5479380151925	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTACACTCGGAACGT	4484	False	NA	-8	True	ATTAAA	-16	NA	73089849	73074429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73085981_73086112_73087463_73087544_73087924_73088079_73089743
ES.5418.21	chr11	-	2525	11	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	25.7699437329615	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACACTCGGAACG	4484	False	NA	-9	True	ATTAAA	-15	NA	73089849	73074430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ES.5418.22	chr11	-	2849	13	NNC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.1104448470774	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACACTCGGAACG	4484	False	NA	-9	True	ATTAAA	-15	NA	73089849	73074430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079642_73082503_73082589_73083880_73083960_73085981_73086112_73087463_73087544_73087924_73088079_73089743
ES.5418.3	chr11	-	2657	11	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-7	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	26.0739333434754	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACGTTTACTAGATGACA	4458	False	NA	5	True	ATTAAA	-29	NA	73089875	73074416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73087463_73087544_73087924_73088079_73089743
ES.5418.4	chr11	-	4561	9	NIC	ENSMUSG00000005949.10	novel	2570	11	NA	NA	4	0	intron_retention	FALSE	canonical	3	46	junction_8	9.19238815542512	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4469	False	NA	0	True	ATTAAA	-24	NA	73089864	73074421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5418.6	chr11	-	2573	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	-4	1	-4	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4461	False	NA	-1	True	ATTAAA	-23	NA	73089872	73074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5418.7	chr11	-	3704	9	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_8	9.28624655067913	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4487	False	NA	-1	True	ATTAAA	-23	NA	73089846	73074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73077114_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5418.8	chr11	-	3613	10	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	46	junction_9	8.75736022010579	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4483	False	NA	-1	True	ATTAAA	-23	NA	73089850	73074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73077114_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5418.9	chr11	-	2393	10	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	20.4673784409952	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4470	False	NA	-1	True	ATTAAA	-23	NA	73089863	73074422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73075878_73076063_73076182_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ES.5419.1	chr11	+	2709	6	ISM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	4333	7	4333	2	3prime_fragment	TRUE	canonical	0	0	junction_5	1.35646599662505	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCCTTTGATGAA	4040	False	NA	NA	False	AATAAA	-15	NA	73094618	73115330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
ES.542.1	chr1	-	1750	10	NIC	ENSMUSG00000072295.8	novel	2131	13	NA	NA	4	-46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	3.74495545474505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCTGAGAAATTATTT	NA	False	NA	NA	False	TATAAA	-15	NA	59134048	59089710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59090445_59091654_59091693_59097814_59097879_59099730_59099837_59101554_59101690_59105308_59105389_59106935_59107005_59107841_59107887_59117041_59117129_59133656
ES.542.2	chr1	-	1915	13	FSM	ENSMUSG00000072295.8	ENSMUST00000097080.4	2131	13	-10	226	-10	-226	multi-exon	FALSE	canonical	1	1	junction_7	3.19722101554181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTAGAAACGTGTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	59134069	59089890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59090445_59091654_59091693_59097814_59097879_59099730_59099837_59101554_59101690_59105308_59105389_59106935_59107005_59107841_59107887_59108875_59109002_59114155_59114302_59115829_59115882_59117041_59117129_59133656
ES.542.3	chr1	-	1591	10	NIC	ENSMUSG00000072295.8	novel	2131	13	NA	NA	3	-226	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	3.89998417217428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTAGAAACGTGTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	59134049	59089890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59090445_59091654_59091693_59097814_59097879_59101554_59101690_59105308_59105389_59106935_59107005_59107841_59107887_59108875_59109002_59117041_59117129_59133656
ES.5420.1	chr11	+	5754	18	NNC	ENSMUSG00000043029.3	novel	5835	18	NA	NA	81	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24783549621155	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCATGTTTCTGTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	73158294	73191192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_73158489_73160466_73160607_73168553_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020_73186296_73187254_73187368_73187553_73187634_73187931
ES.5421.1	chr11	-	149	1	Intergenic	novelGene_4245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATATATATA	6957	False	NA	NA	False	NA	NA	NA	73192077	73191928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_73191900_73192100
ES.5422.1	chr11	-	4755	6	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	0	-3	intron_retention	FALSE	canonical	3	7	junction_4	6.49923072370877	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTAGTGATGACTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	73215460	73195820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
ES.5422.2	chr11	-	1678	7	NIC	ENSMUSG00000020774.10	novel	1746	7	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	6.39444203108363	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTAGTGATGACTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	73215458	73195820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73213904_73214058_73215080
ES.5422.3	chr11	-	3498	5	ISM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	2	3	2	-3	intron_retention	FALSE	canonical	3	17	junction_3	2.23606797749979	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTAGTGATGACTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	73215458	73195820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911
ES.5422.4	chr11	-	1533	6	FSM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	-8	5	-8	-5	multi-exon	FALSE	canonical	3	11	junction_5	4.1182520563948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTAGTGATGACTG	NA	False	NA	NA	False	ATTAAA	-11	NA	73215468	73195822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080
ES.5422.5	chr11	-	4507	3	FSM	ENSMUSG00000020774.10	ENSMUST00000132774.2	4171	3	-295	-41	2	41	multi-exon	FALSE	canonical	3	11	junction_2	6	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	73215458	73206781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_73210715_73212911_73213108_73215080
ES.5422.6	chr11	-	2415	1	NIC	ENSMUSG00000020774.10	novel	1530	6	NA	NA	7	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAGTGATGATGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	73215453	73213038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73213000_73215500
ES.5422.7	chr11	-	1390	2	NIC	ENSMUSG00000020774.10	novel	581	3	NA	NA	2	-6	intron_retention	FALSE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGTCCAAAAAATAGTGAT	NA	False	NA	NA	False	AATAAA	-9	NA	73215458	73213045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_73214058_73215080
ES.5423.1	chr11	-	177	1	Intergenic	novelGene_4246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73382917	73382740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_73382700_73382900
ES.5424.1	chr11	+	181	1	Intergenic	novelGene_4247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTATTTTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	74070081	74070262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74070100_74070300
ES.5425.1	chr11	+	2077	1	Intergenic	novelGene_4248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAACCAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	74367792	74369869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74367800_74369900
ES.5426.1	chr11	+	751	1	Intergenic	novelGene_4249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAAGTTTCTCCAAAACA	NA	False	NA	NA	False	NA	NA	NA	74414852	74415603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74414900_74415600
ES.5427.1	chr11	-	6897	24	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	191	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	8.37179529860466	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAAACCTGGCACTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	74413386	74274190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313783_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ES.5427.10	chr11	-	6462	25	FSM	ENSMUSG00000038807.20	ENSMUST00000102521.9	6565	25	-26	129	-26	0	multi-exon	FALSE	canonical	0	0	junction_23	9.95606668764773	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAGTTCACATTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	74481038	74274310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74458041_74458078_74480785
ES.5427.11	chr11	-	6293	24	NNC	ENSMUSG00000038807.20	novel	6389	26	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	8.24437712949305	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAGTTCACATTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	74413627	74274310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413507
ES.5427.12	chr11	-	6538	26	FSM	ENSMUSG00000038807.20	ENSMUST00000238457.2	6389	26	-149	0	-149	0	multi-exon	FALSE	canonical	0	0	junction_23	10.7274600908137	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAGTTCACATTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	74501890	74274310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74458041_74458078_74487707_74487825_74501678
ES.5427.13	chr11	-	6435	25	NIC	ENSMUSG00000038807.20	novel	6389	26	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	9.51013713535895	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGAGTTCACATTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	74501823	74274310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74487707_74487825_74501678
ES.5427.16	chr11	-	6485	23	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_14	8.18699331281834	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAGAGTTCACATTTC	NA	False	NA	-6	True	AATAAA	-15	NA	74413623	74274312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ES.5427.17	chr11	-	2403	1	Genic_Genomic	ENSMUSG00000038807.20	novel	NA	NA	NA	NA	-58	-83364	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGGAAGGTTGGGAAT	NA	False	NA	NA	False	NA	NA	NA	74413635	74411232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_74411200_74413600
ES.5427.18	chr11	-	206	1	Intergenic	novelGene_4250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACATTTTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	74446611	74446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74446400_74446600
ES.5427.2	chr11	-	6572	24	NIC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	-42	4	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	5.74768795466461	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCACATTTCTTGGAGT	NA	False	NA	1	True	AATAAA	-22	NA	74413619	74274305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ES.5427.3	chr11	-	6351	24	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	-24355	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	8.24437712949305	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74437932	74274308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74437756
ES.5427.4	chr11	-	6348	24	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	187	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.12799312325744	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74413390	74274308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279136_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ES.5427.5	chr11	-	6459	25	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	17278	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	9.95606668764773	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74463672	74274308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74458041_74458078_74463424
ES.5427.6	chr11	-	6516	25	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	141	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	11.1492401335497	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTCACATTTCTTGG	NA	False	NA	-2	True	AATAAA	-19	NA	74413436	74274308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286717_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74407846_74407984_74413225
ES.5427.7	chr11	-	6977	26	NNC	ENSMUSG00000038807.20	novel	6389	26	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	12.9697494193219	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGTTCACATTTCTTG	NA	False	NA	-3	True	AATAAA	-18	NA	74501863	74274309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305403_74307057_74307159_74313255_74313749_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74458041_74458078_74487707_74487825_74501678
ES.5427.9	chr11	-	6400	25	NNC	ENSMUSG00000038807.20	novel	6565	25	NA	NA	156	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	10.0373434677154	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGTTCACATTTCTTG	NA	False	NA	-3	True	AATAAA	-18	NA	74413421	74274309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713_74298786_74303122_74303279_74305216_74305347_74307057_74307159_74313255_74313340_74313752_74313783_74316007_74316062_74316737_74316817_74326526_74326631_74327749_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ES.5428.1	chr11	+	4031	4	FSM	ENSMUSG00000069814.7	ENSMUST00000100866.3	4002	4	-37	8	-37	-8	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACGATGAGAGTGC	NA	False	NA	16	True	AATAAA	-22	NA	74510393	74532334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74510673_74520784_74520938_74526066_74526115_74528783
ES.5429.1	chr11	+	207	1	Intergenic	novelGene_4254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	74537343	74537550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74537300_74537600
ES.543.1	chr1	-	1816	11	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	0	29	combination_of_known_splicesites	FALSE	canonical	3	28	junction_10	51.7934358775318	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCGCCAGTTATTT	4340	False	NA	19	True	AATACA	-42	NA	59158965	59139719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
ES.543.10	chr1	-	4142	1	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	9580	2	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGCTTTATTAACTGAA	7787	False	NA	-15	True	AATAAA	-19	NA	59143895	59139753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59139800_59143900
ES.543.12	chr1	-	8068	6	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	51	1	intron_retention	FALSE	canonical	3	178	junction_3	19.70786644972	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAGCTTTATTAACTGA	4391	False	NA	-16	True	AATAAA	-18	NA	59158914	59139754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59140358_59144704_59144827_59145702_59147958_59148197_59149265_59153239_59153378_59155031
ES.543.13	chr1	-	1857	12	NNC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.6320986419185	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAGCTTTATTAACTGA	4055	False	NA	-16	True	AATAAA	-18	NA	59159250	59139754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155097_59157133_59157166_59159110
ES.543.2	chr1	-	1857	12	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	-2	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	59.5276170368229	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGCGCCAGTTATT	4338	False	NA	18	True	AATACA	-41	NA	59158967	59139720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155097_59157133_59157166_59158861
ES.543.3	chr1	-	1698	11	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	20	8	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_5	71.5891053163818	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAAGGTTTTTCCTTTT	4360	False	NA	-2	True	AATAAA	-32	NA	59158945	59139740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147312_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59158861
ES.543.5	chr1	-	1999	13	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	54	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	92.6991849418801	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTGAAGGTTTTTCCT	4394	False	NA	-5	True	AATAAA	-29	NA	59158911	59139743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149151_59149265_59153239_59153378_59153501_59153542_59155031_59155097_59157220_59157439_59158861
ES.543.6	chr1	-	1845	12	NNC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	73.814711069325	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAACTGAAGGTTTTTCC	4032	False	NA	-6	True	AATAAA	-28	NA	59159273	59139744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155097_59157133_59157166_59159155
ES.543.8	chr1	-	2733	10	NNC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	51	2	intron_retention	FALSE	non_canonical	0	0	junction_8	64.7936896790283	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAACTGAAGGTTTTT	4391	False	NA	-8	True	AATAAA	-26	NA	59158914	59139746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155097_59157133_59157166_59158861
ES.543.9	chr1	-	1850	11	NNC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	58.8626367061483	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTTTATTAACTGAAG	4043	False	NA	-14	True	AATAAA	-20	NA	59159262	59139752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59159091
ES.5430.1	chr11	+	5601	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-213	-9	-193	9	multi-exon	TRUE	canonical	0	0	junction_12	69.5319897601097	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGTGTGCTCTGTGG	NA	False	NA	35	True	AATAAA	-29	NA	74540127	74561682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.10	chr11	+	5981	23	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-64	-5	intron_retention	FALSE	canonical	0	0	junction_12	73.0341819666462	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540256	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.102	chr11	+	4357	15	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-2851	-3	intron_retention	FALSE	canonical	1	2	junction_3	114.52929399797	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCCAGCCTTTCCTG	NA	False	NA	23	True	AATAAA	-17	NA	74552456	74561670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74552918_74554205_74554433_74554609_74554719_74554856_74555753_74555832_74555896_74556007_74556253_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.104	chr11	+	4485	12	NIC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	-2488	-8	intron_retention	FALSE	canonical	0	0	junction_3	97.9205277358436	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74552819	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74556253_74556518_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.105	chr11	+	3556	15	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-2422	-6	intron_retention	FALSE	canonical	0	0	junction_3	87.7509520850728	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTGCCCCAGCCTTTC	NA	False	NA	20	True	AATAAA	-14	NA	74552885	74561667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.106	chr11	+	3331	16	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	13863	9	-1104	-9	3prime_fragment	FALSE	canonical	0	0	junction_2	86.8751338927825	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCTGCCCCAGCCT	NA	False	NA	17	True	AATAAA	-11	NA	74554203	74561664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.108	chr11	+	3116	15	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	14264	0	-703	0	3prime_fragment	FALSE	canonical	0	0	junction_1	89.9219900008573	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74554604	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.109	chr11	+	3917	9	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-34	0	intron_retention	FALSE	canonical	3	288	junction_2	24.8080128184424	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74555273	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.11	chr11	+	5255	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-61	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	89.8085927588966	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540259	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.110	chr11	+	3104	8	NIC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	715	0	intron_retention	FALSE	canonical	3	303	junction_6	25.1379865412276	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74556022	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558808_74558892_74558967_74560240
ES.5430.111	chr11	+	3603	7	NIC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	1550	1	intron_retention	FALSE	canonical	3	303	junction_6	22.6476636028237	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCCTTTCCTGTGTG	NA	False	NA	27	True	AATAAA	-21	NA	74556857	74561674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892
ES.5430.13	chr11	+	6338	22	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-60	-3	intron_retention	FALSE	canonical	0	0	junction_12	93.7060342863682	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCCAGCCTTTCCTG	NA	False	NA	23	True	AATAAA	-17	NA	74540260	74561670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550312_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558808_74558892_74558967_74560240
ES.5430.14	chr11	+	5681	21	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-58	-72	intron_retention	FALSE	canonical	0	0	junction_11	90.781275602406	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAGACACGAAAGTAAAG	NA	False	NA	-10	True	AATGAA	-21	NA	74540262	74560659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.15	chr11	+	5593	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-48	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	100.162471565248	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCCAGCCTTTCCTG	NA	False	NA	23	True	AATAAA	-17	NA	74540272	74561670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74542097_74542247_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.16	chr11	+	4572	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	-68	875	-48	67	multi-exon	FALSE	canonical	0	0	junction_12	69.5319897601097	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGAGTGGATGACGTG	NA	False	NA	129	True	NA	NA	NA	74540272	74560798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.17	chr11	+	5338	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-46	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	87.7286179077272	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540274	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554719_74554856_74554958_74555599_74555753_74555832_74555896_74556118_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.20	chr11	+	5595	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-45	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	100.259257123985	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540275	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74540788_74540945_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.21	chr11	+	4704	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-42	13	intron_retention	FALSE	canonical	0	0	junction_12	71.5046232989105	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGCCTGTGGATGTC	NA	False	NA	75	True	NA	NA	NA	74540278	74560744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.22	chr11	+	4587	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-41	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	86.4858729100756	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540279	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240_74560333_74561177
ES.5430.23	chr11	+	5597	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-40	0	intron_retention	FALSE	canonical	0	0	junction_12	72.0629057272363	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540280	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.24	chr11	+	6179	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-39	-10	intron_retention	FALSE	canonical	0	0	junction_12	85.7183588914282	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCTGCCCCAGCC	NA	False	NA	16	True	AATAAA	-10	NA	74540281	74561663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74555753_74555832_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.26	chr11	+	6080	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_12	70.7477792152438	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540281	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.27	chr11	+	5705	23	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-39	0	intron_retention	FALSE	canonical	0	0	junction_12	87.442448605822	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540281	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.31	chr11	+	5685	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-31	-2	intron_retention	FALSE	canonical	0	0	junction_12	71.611876595752	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540289	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.34	chr11	+	5530	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-21	-2	intron_retention	FALSE	canonical	0	0	junction_12	70.4325425890302	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540299	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.36	chr11	+	6049	25	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-21	-5	intron_retention	FALSE	canonical	0	0	junction_12	89.3177749977884	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540299	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560248
ES.5430.37	chr11	+	5506	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-20	7	intron_retention	FALSE	canonical	0	0	junction_12	70.5754127787354	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCCTGTGTGCTCTGT	NA	False	NA	33	True	AATAAA	-27	NA	74540300	74561680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.38	chr11	+	5608	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-12	7	intron_retention	FALSE	canonical	0	0	junction_12	71.9184320571939	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCCTGTGTGCTCTGT	NA	False	NA	33	True	AATAAA	-27	NA	74540308	74561680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.39	chr11	+	5074	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.361262622397	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCCAGCCTTTCCTG	NA	False	NA	23	True	AATAAA	-17	NA	74540311	74561670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556748_74556903_74556980_74557123_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.4	chr11	+	5425	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-140	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	87.8202345703995	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCTGCCCCAGCCT	NA	False	NA	17	True	AATAAA	-11	NA	74540180	74561664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551221_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.40	chr11	+	5777	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-9	-9	intron_retention	FALSE	canonical	0	0	junction_12	71.7864139301633	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGCTGCCCCAGCCT	NA	False	NA	17	True	AATAAA	-11	NA	74540311	74561664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.41	chr11	+	6127	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_12	85.8135755824992	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540311	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.42	chr11	+	5253	25	FSM	ENSMUSG00000020741.18	ENSMUST00000117818.2	4284	25	-29	-940	-9	-2	multi-exon	FALSE	canonical	0	0	junction_12	89.7961812476826	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540311	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.46	chr11	+	6200	23	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_12	73.4339530091187	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540319	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.47	chr11	+	5190	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	15	intron_retention	FALSE	canonical	0	0	junction_12	90.712470823746	551	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCCTGTGGATGTCTT	NA	False	NA	77	True	NA	NA	NA	74540320	74560746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550312_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.48	chr11	+	5486	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	86.8883789698024	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552135_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.49	chr11	+	5556	25	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_11	70.6389366780107	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554719_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.5	chr11	+	5566	27	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	100.259640744071	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540242	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74540915_74541005_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.50	chr11	+	6230	23	NIC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	73.2810169008081	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540321	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.51	chr11	+	5386	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	69.5319897601097	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540321	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554704_74554849_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.52	chr11	+	5901	22	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_12	71.2363445163026	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCAGCCTTTCCTGTG	NA	False	NA	25	True	AATAAA	-19	NA	74540321	74561672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558808_74558892_74558967_74560240
ES.5430.53	chr11	+	5874	26	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_12	87.9496765201556	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540321	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74541005_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.55	chr11	+	5396	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	97.1424850413042	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCAGCCTTTCCTGTG	NA	False	NA	25	True	AATAAA	-19	NA	74540321	74561672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554719_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558796_74558882_74558967_74560240
ES.5430.56	chr11	+	6116	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_12	90.7643659831607	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCTTTCCTGTGTGC	NA	False	NA	28	True	AATAAA	-22	NA	74540321	74561675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550312_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.57	chr11	+	6729	19	NNC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_10	98.7198461541111	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540321	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554390_74554609_74554715_74554856_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558808_74558892_74558967_74560240
ES.5430.58	chr11	+	5419	27	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	100.357084347336	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540321	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74540915_74540945_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.59	chr11	+	5386	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_12	90.3388077685106	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540321	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.6	chr11	+	5920	23	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-70	2	intron_retention	FALSE	canonical	0	0	junction_12	102.523006891862	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCTTTCCTGTGTGC	NA	False	NA	28	True	AATAAA	-22	NA	74540250	74561675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550312_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.60	chr11	+	5390	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	87.1665073293636	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540321	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558581_74558672_74558808_74558892_74558967_74560240
ES.5430.61	chr11	+	5624	25	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_12	81.5097131226293	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCCTTTCCTGTGTG	NA	False	NA	27	True	AATAAA	-21	NA	74540321	74561674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.64	chr11	+	5334	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.259640744071	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540321	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540368_74540915_74541005_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.66	chr11	+	5551	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	4	-8	intron_retention	FALSE	canonical	0	0	junction_12	71.4708554293525	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540324	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558808_74558892_74558967_74560240
ES.5430.67	chr11	+	5359	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	99.2169824173261	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540324	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550312_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554714_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557954_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.68	chr11	+	5669	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	4	-2	intron_retention	FALSE	canonical	0	0	junction_11	71.5280425397285	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540324	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.69	chr11	+	5518	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.0648284543328	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540326	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557236_74557362_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.7	chr11	+	5547	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-68	2	intron_retention	FALSE	canonical	0	0	junction_12	70.9265930185725	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCTTTCCTGTGTGC	NA	False	NA	28	True	AATAAA	-22	NA	74540252	74561675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.70	chr11	+	5371	27	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.666133826631	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCCCAGCCTTTCCTG	NA	False	NA	23	True	AATAAA	-17	NA	74540329	74561670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74540915_74541005_74547248_74547348_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554714_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.73	chr11	+	5721	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	-8	intron_retention	FALSE	canonical	0	0	junction_12	69.2524217670755	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74540330	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.74	chr11	+	4366	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	-75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	97.3900528801581	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGAAGACACGAAAGTA	NA	False	NA	-13	True	AATGAA	-18	NA	74540330	74560656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556250_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.75	chr11	+	5266	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.9995454533715	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540330	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547316_74547980_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.76	chr11	+	5475	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_12	70.023693906658	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540330	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558808_74558892_74558967_74560240
ES.5430.77	chr11	+	7964	17	NNC	ENSMUSG00000020741.18	novel	6098	24	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_11	91.3406228082555	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCCCAGCCTTTCCT	NA	False	NA	22	True	AATAAA	-16	NA	74540338	74561669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74552918_74554205_74554433_74554612_74554715_74554856_74556253_74556518_74556604_74556748_74558052_74558142_74558808_74558892_74558967_74560240
ES.5430.79	chr11	+	5387	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	9	-10	intron_retention	FALSE	canonical	0	0	junction_12	90.3010926544833	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCTGCCCCAGCC	NA	False	NA	16	True	AATAAA	-10	NA	74540349	74561663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.80	chr11	+	5804	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_10	71.7037593960818	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540356	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.81	chr11	+	5742	24	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-7	-10	intron_retention	FALSE	non_canonical	0	0	junction_12	91.461872395438	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACCTGCTGCCCCAGCC	NA	False	NA	16	True	AATAAA	-10	NA	74540358	74561663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240_74560694_74561136
ES.5430.82	chr11	+	5289	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.7547952787995	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540360	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540455_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554714_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.85	chr11	+	6233	23	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_11	73.0043019223768	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCCAGCCTTTCCTGT	NA	False	NA	24	True	AATAAA	-18	NA	74540370	74561671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.87	chr11	+	5423	26	NNC	ENSMUSG00000020741.18	novel	664	3	NA	NA	54	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.851970729381	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCCCAGCCTTTCC	NA	False	NA	21	True	AATAAA	-15	NA	74540709	74561668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74540945_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557123_74557775_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.88	chr11	+	5343	23	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	6647	0	intron_retention	FALSE	canonical	0	0	junction_11	72.6274314680954	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74547302	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558808_74558892_74558967_74560240
ES.5430.89	chr11	+	6462	20	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	6681	-8	intron_retention	FALSE	canonical	0	0	junction_11	75.606907304379	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	False	NA	18	True	AATAAA	-12	NA	74547336	74561665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74555896_74556007_74557121_74557767_74557849_74557925_74558052_74558142_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.91	chr11	+	3148	16	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-5176	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	85.5442705400088	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCCTTTCCTGTGTGC	NA	False	NA	28	True	AATAAA	-22	NA	74550131	74561675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551286_74556088_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.94	chr11	+	4554	21	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-4790	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	91.9104319432783	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74550517	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.95	chr11	+	5247	18	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-4650	-1	intron_retention	FALSE	canonical	0	0	junction_7	99.011900301853	554	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCAGCCTTTCCTGTG	NA	False	NA	25	True	AATAAA	-19	NA	74550657	74561672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.96	chr11	+	4276	19	ISM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	10835	0	-4132	0	3prime_fragment	FALSE	canonical	0	0	junction_5	80.7575245892157	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74551175	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.98	chr11	+	4106	18	NNC	ENSMUSG00000020741.18	novel	635	3	NA	NA	-3694	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.884084953154	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCAGCCTTTCCTGTG	NA	False	NA	25	True	AATAAA	-19	NA	74551613	74561672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74551688_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ES.5430.99	chr11	+	4827	12	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	-3050	0	intron_retention	FALSE	canonical	0	0	junction_3	96.4664974173259	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74552257	74561673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74557121_74557767_74557849_74557925_74558052_74558142_74558587_74558672_74558808_74558892_74558967_74560240
ES.5431.1	chr11	+	11078	1	Antisense	novelGene_ENSMUSG00000020745.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTGTTTTGTTTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	74564092	74575170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_74564100_74575200
ES.5432.1	chr11	+	830	1	Antisense	novelGene_ENSMUSG00000020745.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATGTCTGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	74615005	74615835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_74615000_74615800
ES.5433.1	chr11	+	137	1	Intergenic	novelGene_4256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTTCCTTTTGATTTTA	NA	False	NA	6	True	AATAAA	-25	NA	74619567	74619704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74619600_74619700
ES.5434.1	chr11	+	202	1	Intergenic	novelGene_4257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAACAAGCCAGGCA	539	False	NA	NA	False	NA	NA	NA	74620234	74620436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74620200_74620400
ES.5435.1	chr11	+	175	1	Intergenic	novelGene_4258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	74648440	74648615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74648400_74648600
ES.5436.1	chr11	+	2819	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	-3	797	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8491	False	NA	101	True	AATATA	-19	NA	74661652	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.10	chr11	+	2674	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	11	793	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.602843506762	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8505	False	NA	97	True	AATATA	-15	NA	74661666	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686890_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.11	chr11	+	2865	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	11	793	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	160.661258553517	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8505	False	NA	97	True	AATATA	-15	NA	74661666	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74691151_74691282_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.12	chr11	+	2535	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	11	793	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	135.215568630243	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8505	False	NA	97	True	AATATA	-15	NA	74661666	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.13	chr11	+	2271	11	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	13	221	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	159.794242699792	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8507	False	NA	-18	True	NA	NA	NA	74661668	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74672860_74672971_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.14	chr11	+	10045	12	FSM	ENSMUSG00000010554.15	ENSMUST00000092912.12	2054	12	-75	-7916	20	-2715	multi-exon	FALSE	canonical	0	0	junction_8	182.427977410672	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAAATCCATCAAACT	8514	False	NA	NA	False	NA	NA	NA	74661675	74716636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74691151_74691282_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.15	chr11	+	2020	10	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	20	221	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	175.359806479122	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8514	False	NA	-18	True	NA	NA	NA	74661675	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.16	chr11	+	2635	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	20	9929	20	702	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACAGCATTGTTTTGTA	8514	False	NA	6	True	AATAAA	-17	NA	74661675	74709422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.17	chr11	+	4947	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	21	7616	21	3015	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTCTATTCTGGTCCC	8515	False	NA	NA	False	ATTAAA	-17	NA	74661676	74711735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.19	chr11	+	9784	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	22	-2709	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	127.606261698599	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCATCAAACTGTGTCT	8516	False	NA	NA	False	NA	NA	NA	74661677	74716642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661742_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.2	chr11	+	2087	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-3	221	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	130.637858218818	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8491	False	NA	-18	True	NA	NA	NA	74661652	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74707695_74707870_74707984
ES.5436.20	chr11	+	2650	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	25	791	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	127.606261698599	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTGATCCTGTT	8519	False	NA	95	True	AATATA	-13	NA	74661680	74709511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661742_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.21	chr11	+	2934	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	25	9625	25	1006	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATCTTCTATGTTGACA	8519	False	NA	NA	False	AATAGA	-26	NA	74661680	74709726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.22	chr11	+	4654	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	26	7904	26	2727	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGACTCTCCTGAAAC	8520	False	NA	NA	False	NA	NA	NA	74661681	74711447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.23	chr11	+	5128	12	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	26	3015	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	182.024156057458	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTCTATTCTGGTCCC	8520	False	NA	NA	False	ATTAAA	-17	NA	74661681	74711735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74693718_74693839_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.24	chr11	+	9765	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	27	2792	27	-2792	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTTCCACTTGTGATT	8521	False	NA	NA	False	NA	NA	NA	74661682	74716559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.26	chr11	+	2671	10	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	29	797	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	156.499911253081	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8523	False	NA	101	True	AATATA	-19	NA	74661684	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.27	chr11	+	1913	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	30	10641	30	-10	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCATATTAT	8524	False	NA	NA	False	NA	NA	NA	74661685	74708710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.28	chr11	+	2582	10	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	30	793	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	175.359806479122	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8524	False	NA	97	True	AATATA	-15	NA	74661685	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.29	chr11	+	2954	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	30	797	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	125.165766628909	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8524	False	NA	101	True	AATATA	-19	NA	74661685	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74662045_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.3	chr11	+	2767	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	-1	9818	-1	813	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGGAATTGGGGAAAT	8493	False	NA	117	True	AATATA	-35	NA	74661654	74709533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.30	chr11	+	2628	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	32	797	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	130.637858218818	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8526	False	NA	101	True	AATATA	-19	NA	74661687	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74707695_74707870_74707984
ES.5436.31	chr11	+	2800	12	NNC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	32	703	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	182.304078011174	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACAGCATTGTTTTGTAA	8526	False	NA	7	True	AATAAA	-18	NA	74661687	74709423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74672860_74672971_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.32	chr11	+	9931	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	33	2620	33	-2620	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGGTTTTATCCTTTCT	8527	False	NA	NA	False	NA	NA	NA	74661688	74716731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.33	chr11	+	2138	11	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	33	221	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	169.102010632636	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8527	False	NA	-18	True	NA	NA	NA	74661688	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661742_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.34	chr11	+	2246	9	NNC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	-41	26708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	188.086707066183	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAGTATGTGA	8539	False	NA	NA	False	NA	NA	NA	74661700	74746059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74689072_74690224_74745868
ES.5436.35	chr11	+	2696	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-39	799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	128.602843506762	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATCCTGTTTGAATCCT	8541	False	NA	103	True	AATATA	-21	NA	74661702	74709519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694665_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.36	chr11	+	7210	3	ISM	ENSMUSG00000010554.15	ENSMUST00000092912.12	2054	12	-43	26858	-34	17415	intron_retention	FALSE	canonical	3	383	junction_2	9	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAATAACAACAACAAA	8546	False	NA	NA	False	NA	NA	NA	74661707	74681862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74661811_74664347_74664476_74674883
ES.5436.37	chr11	+	2964	10	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-19	797	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	124.86091027051	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8561	False	NA	101	True	AATATA	-19	NA	74661722	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74662092_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.38	chr11	+	2822	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-12	793	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	125.470669436681	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8568	False	NA	97	True	AATATA	-15	NA	74661729	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661961_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.39	chr11	+	2528	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-11	791	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	131.28880378768	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTGATCCTGTT	8569	False	NA	95	True	AATATA	-13	NA	74661730	74709511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.4	chr11	+	2241	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	-1	221	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8493	False	NA	-18	True	NA	NA	NA	74661654	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.40	chr11	+	2553	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-9	793	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	134.882124464289	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	8571	False	NA	97	True	AATATA	-15	NA	74661732	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.41	chr11	+	9820	11	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-4	-2794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	183.276539687981	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTCCTTCCACTTGTGA	8576	False	NA	NA	False	NA	NA	NA	74661737	74716557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664345_74664476_74672860_74672971_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.42	chr11	+	2842	11	NNC	ENSMUSG00000010554.15	novel	761	3	NA	NA	107	791	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	167.718245876828	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTGATCCTGTT	8696	False	NA	95	True	AATATA	-13	NA	74661857	74709511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74662045_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.43	chr11	+	2196	6	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	-15772	813	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	155.228090241425	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGGAATTGGGGAAAT	NA	False	NA	117	True	AATATA	-35	NA	74678377	74709533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74707695_74707870_74707984
ES.5436.44	chr11	+	2019	6	NNC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	-7286	793	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.830569688102	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTGATCCTGTTTG	NA	False	NA	97	True	AATATA	-15	NA	74686863	74709513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74686890_74691151_74691282_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.45	chr11	+	10153	4	ISM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	31758	2791	-736	-2791	3prime_fragment	FALSE	canonical	3	390	junction_3	21.202725191719	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTCCACTTGTGATTT	NA	False	NA	NA	False	NA	NA	NA	74693413	74716560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.46	chr11	+	1797	3	ISM	ENSMUSG00000010554.15	ENSMUST00000092912.12	2054	12	34327	-796	1928	796	3prime_fragment	FALSE	canonical	3	390	junction_2	8.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGATCCTGTTTGAAT	NA	False	NA	100	True	AATATA	-18	NA	74696077	74709516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74696169_74707695_74707870_74707984
ES.5436.47	chr11	+	1299	4	NNC	ENSMUSG00000010554.15	novel	656	3	NA	NA	1980	221	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	182.906776497999	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	NA	False	NA	-18	True	NA	NA	NA	74696129	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74696169_74699354_74699484_74707695_74707870_74707984
ES.5436.48	chr11	+	7219	1	Genic_Genomic	ENSMUSG00000010554.15	novel	NA	NA	NA	NA	12786	8	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTTTGTTTTAAATAGC	NA	False	NA	NA	False	AATAAA	-23	NA	74712140	74719359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_74712100_74719400
ES.5436.49	chr11	+	5013	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-402	-21	-402	21	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCAAGAGGCAGGGAC	NA	False	NA	62	True	NA	NA	NA	74721343	74736572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.5	chr11	+	2175	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	-1	10410	-1	221	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8493	False	NA	-18	True	NA	NA	NA	74661654	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.51	chr11	+	4792	4	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-64	-17	intron_retention	FALSE	canonical	0	0	junction_2	42.4290257043716	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGGAGCTCCCAAGCC	NA	False	NA	24	True	AATAAA	-33	NA	74721681	74736534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986
ES.5436.52	chr11	+	4491	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-64	-121	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCATGCTCTGAGTTT	NA	False	NA	59	True	NA	NA	NA	74721681	74736430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
ES.5436.53	chr11	+	4610	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-64	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGCATCTGGGTC	NA	False	NA	39	True	AATAAA	-30	NA	74721681	74736549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
ES.5436.54	chr11	+	4488	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-62	164	-62	-164	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACATATTGTATTTT	NA	False	NA	16	True	NA	NA	NA	74721683	74736387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.55	chr11	+	4427	7	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-59	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.9448309155366	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGGAGCTCCCAAGCC	NA	False	NA	24	True	AATAAA	-33	NA	74721686	74736534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74722228_74727188_74727248_74727452_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.56	chr11	+	3656	7	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-49	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	31.9448309155366	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGCTCCCAAGCCTGCA	NA	False	NA	28	True	AATAAA	-37	NA	74721696	74736538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376_74733552_74734521
ES.5436.57	chr11	+	3255	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-21	1356	-21	594	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACTCGCGTGCGCATTC	NA	False	NA	26	True	NA	NA	NA	74721724	74735195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.59	chr11	+	4459	7	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-3	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.9448309155366	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGGAGCTCCCAAGCC	NA	False	NA	24	True	AATAAA	-33	NA	74721742	74736534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74722228_74727188_74727585_74727701_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.6	chr11	+	2040	9	NIC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	6	221	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	133.931652345515	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGAAGGAAAAAG	8500	False	NA	-18	True	NA	NA	NA	74661661	74708941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74661811_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.60	chr11	+	2859	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	-3	1734	-3	216	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTCCCGAGCCTGCCCC	NA	False	NA	NA	False	AATAAA	-20	NA	74721742	74734817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.61	chr11	+	4686	7	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.5688417709886	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCATCTGGGTCATTTC	NA	False	NA	44	True	AATAAA	-35	NA	74721746	74736554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74722228_74725751_74725846_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.63	chr11	+	3143	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	26	571	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCCTTGTGTCAGACA	NA	False	NA	3	True	NA	NA	NA	74721771	74735172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
ES.5436.64	chr11	+	2416	3	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	60	576	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGTCAGACACTCAG	NA	False	NA	8	True	NA	NA	NA	74721805	74735177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74722228_74732986_74733180_74733376
ES.5436.65	chr11	+	4168	6	NNC	ENSMUSG00000000282.13	novel	777	3	NA	NA	2085	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8109737740287	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTGAAACCTGAGAC	NA	False	NA	10	True	AATAAA	-19	NA	74723830	74736520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74723922_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.66	chr11	+	4151	6	NNC	ENSMUSG00000000282.13	novel	777	3	NA	NA	-1181	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8109737740287	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGGAGCTCCCAAGCCTG	NA	False	NA	26	True	AATAAA	-35	NA	74725970	74736536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74726029_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ES.5436.67	chr11	+	2986	5	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	-543	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.5555175037873	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGAGCTCCCAAGCCTGC	NA	False	NA	27	True	AATAAA	-36	NA	74727750	74736537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74727775_74728437_74728550_74732986_74733180_74733376_74734219_74734722
ES.5436.68	chr11	+	2949	2	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	2175	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGCATCTGGGTCAT	NA	False	NA	41	True	AATAAA	-32	NA	74730468	74736551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74730579_74733712
ES.5436.69	chr11	+	3843	3	NNC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	3717	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGCATCTGGGTCAT	NA	False	NA	41	True	AATAAA	-32	NA	74732010	74736551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74732486_74732986_74733180_74733376
ES.5436.7	chr11	+	10015	11	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	6	-2697	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	158.426670734444	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTTTATATTTGCTT	8500	False	NA	NA	False	NA	NA	NA	74661661	74716654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74665150_74665285_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5436.70	chr11	+	4247	2	ISM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	10345	17	3797	-17	3prime_fragment	FALSE	canonical	3	78	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGGAGCTCCCAAGCC	NA	False	NA	24	True	AATAAA	-33	NA	74732090	74736534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74733180_74733376
ES.5436.71	chr11	+	170	1	Intergenic	novelGene_4259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	74737533	74737703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74737500_74737700
ES.5436.72	chr11	+	192	1	Intergenic	novelGene_4260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAGTATGTGA	NA	False	NA	NA	False	NA	NA	NA	74745867	74746059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74745900_74746100
ES.5436.8	chr11	+	2854	11	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	6	797	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	159.794242699792	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATCCTGTTTGAATC	8500	False	NA	101	True	AATATA	-19	NA	74661661	74709517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74661811_74664347_74664476_74672860_74672971_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ES.5437.1	chr11	+	4745	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	-1356	0	-1349	0	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	False	NA	26	True	AATAAA	-18	NA	74787547	74800168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.11	chr11	+	3811	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-8	-4	intron_retention	FALSE	canonical	0	0	junction_8	229.877548925509	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788888	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.12	chr11	+	2602	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	-7	794	0	54	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCATTAGGATTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	74788896	74799374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.13	chr11	+	3660	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	0	-4	intron_retention	FALSE	canonical	3	655	junction_6	81.2182844082675	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788896	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.14	chr11	+	3256	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_3	215.373516197535	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTTGTCTGGATTC	NA	False	NA	21	True	AATAAA	-13	NA	74788896	74800163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.16	chr11	+	4072	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	1	-4	intron_retention	FALSE	canonical	3	655	junction_7	74.832962137164	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788897	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.17	chr11	+	7221	10	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	655	junction_7	80.0319380691928	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788902	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74794840_74795654_74798278_74798649_74798947_74799053
ES.5437.18	chr11	+	4178	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	0	-789	0	789	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGTGTACATACAGT	NA	False	NA	NA	False	NA	NA	NA	74788903	74800957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.19	chr11	+	4084	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	655	junction_7	78.203724241286	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788907	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.20	chr11	+	3541	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	5	-4	intron_retention	FALSE	canonical	3	655	junction_7	78.2339837475873	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788908	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.22	chr11	+	3382	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	284.355590837979	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788914	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796029_74796143_74796716_74796850_74798154_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.23	chr11	+	5580	11	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	655	junction_7	76.8098951958665	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788914	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.24	chr11	+	4027	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-6	intron_retention	FALSE	canonical	3	655	junction_8	74.5543705403423	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74788914	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798947_74799053
ES.5437.25	chr11	+	5596	12	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_7	230.930135046787	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788914	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74791404_74792314_74792475_74792834_74794840_74795654_74795818_74796031_74796094_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.26	chr11	+	4977	12	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	699	junction_5	61.1809401530945	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788914	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.29	chr11	+	5257	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	655	junction_8	73.7985245260515	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788916	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.3	chr11	+	3832	16	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-1083	-6	intron_retention	FALSE	canonical	0	0	junction_1	207.183804600864	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74787813	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74787945_74788585_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.31	chr11	+	4357	13	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_8	229.877548925509	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTCTGGATTCTAGTAA	NA	False	NA	27	True	AATAAA	-19	NA	74788916	74800169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74796094_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.32	chr11	+	3453	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	655	junction_8	77.6753218294059	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788916	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798947_74799053
ES.5437.33	chr11	+	3734	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	655	junction_7	78.0097096065574	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788916	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.36	chr11	+	3354	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-7	-8	intron_retention	FALSE	canonical	0	0	junction_4	208.838234438202	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACTGGCTTGTCTGGA	NA	False	NA	18	True	AATAAA	-10	NA	74788916	74800160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790992_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.37	chr11	+	3362	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-5	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	214.328055340691	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74788918	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791398_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.4	chr11	+	4423	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-922	-2	intron_retention	FALSE	canonical	3	655	junction_7	78.033978337311	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74787974	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.40	chr11	+	3450	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-4	-4	intron_retention	FALSE	canonical	2	14	junction_1	210.597110277285	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788919	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789121_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.41	chr11	+	3320	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-4	-4	intron_retention	FALSE	canonical	0	0	junction_10	213.920414821847	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788919	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796094_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.42	chr11	+	4103	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-4	-5	intron_retention	FALSE	canonical	3	655	junction_7	74.8726233160173	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTTGTCTGGATTC	NA	False	NA	21	True	AATAAA	-13	NA	74788919	74800163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.43	chr11	+	3471	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-3	-2	intron_retention	FALSE	canonical	2	3	junction_1	213.244721445783	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788920	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789101_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.44	chr11	+	4423	11	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	655	junction_6	78.3416236747746	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTTGTCTGGATTC	NA	False	NA	21	True	AATAAA	-13	NA	74788920	74800163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.45	chr11	+	3361	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-3	-4	intron_retention	FALSE	non_canonical	0	0	junction_14	210.110041625422	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788920	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799060
ES.5437.46	chr11	+	3938	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	1	-4	intron_retention	FALSE	canonical	3	655	junction_8	71.9702436867582	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788924	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.47	chr11	+	3355	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	1	-5	intron_retention	FALSE	canonical	2	21	junction_13	268.07267519028	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTTGTCTGGATTC	NA	False	NA	21	True	AATAAA	-13	NA	74788924	74800163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790984_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798873_74798947_74799053
ES.5437.48	chr11	+	5590	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	2	-4	intron_retention	FALSE	canonical	3	655	junction_7	73.8775262775419	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788925	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.49	chr11	+	3339	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	3	-7	intron_retention	FALSE	canonical	0	0	junction_14	210.110041625422	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTGGCTTGTCTGGAT	NA	False	NA	19	True	AATAAA	-11	NA	74788926	74800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799073
ES.5437.5	chr11	+	5441	14	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-787	-4	intron_retention	FALSE	canonical	0	0	junction_10	221.962414857713	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788109	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796094_74796716_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.50	chr11	+	4383	13	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	3	-6	intron_retention	FALSE	canonical	2	23	junction_4	218.780886708343	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74788926	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790984_74791404_74792314_74792475_74792834_74792993_74794645_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.51	chr11	+	5699	11	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	4	-4	intron_retention	FALSE	canonical	3	655	junction_8	74.0586929401269	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788927	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74798947_74799053
ES.5437.52	chr11	+	3977	13	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	4	-4	intron_retention	FALSE	canonical	3	655	junction_6	71.8696254029166	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74788927	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.53	chr11	+	5436	11	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	4	-2	intron_retention	FALSE	canonical	3	655	junction_8	74.3390207091807	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74788927	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74798278_74798649
ES.5437.54	chr11	+	3361	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	5	-7	intron_retention	FALSE	canonical	0	0	junction_13	213.184838837578	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTGGCTTGTCTGGAT	NA	False	NA	19	True	AATAAA	-11	NA	74788928	74800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798797_74798873_74798947_74799053
ES.5437.55	chr11	+	3070	10	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-879	-4	intron_retention	FALSE	canonical	0	0	junction_5	256.399042774739	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74791659	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796664_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.56	chr11	+	2365	10	ISM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	3409	4	-226	-4	3prime_fragment	FALSE	canonical	3	655	junction_3	79.6526409472815	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTTGTCTGGATTCT	NA	False	NA	22	True	AATAAA	-14	NA	74792312	74800164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.57	chr11	+	5095	5	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	320	-2	intron_retention	FALSE	canonical	3	810	junction_3	32.3216258873219	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGTCTGGATTCTAG	NA	False	NA	24	True	AATAAA	-16	NA	74792858	74800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74792993_74794645_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.6	chr11	+	4139	15	NNC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-755	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	214.328055340691	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74788141	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792320_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.8	chr11	+	3236	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-6	intron_retention	FALSE	canonical	0	0	junction_8	221.563620366301	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	False	NA	20	True	AATAAA	-12	NA	74788887	74800162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ES.5437.9	chr11	+	5685	10	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	-9	-7	intron_retention	FALSE	canonical	3	655	junction_7	80.8194146092248	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACTGGCTTGTCTGGAT	NA	False	NA	19	True	AATAAA	-11	NA	74788887	74800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74789042_74789202_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74798278_74798649_74798947_74799053
ES.5438.1	chr11	+	4604	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-122	1366	-122	-100	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCGTGGCCGTGCTGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	74816526	75053908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.10	chr11	+	5922	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	45.0242163219046	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACCTCTGCTGGTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	74816647	75055272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74878561_74878637_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.11	chr11	+	4090	18	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	32.2346500579712	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	74816647	75055271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.12	chr11	+	4206	16	ISM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-1	7854	-1	-6588	5prime_fragment	FALSE	canonical	3	122	junction_1	12.2085580184102	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTCCCGTTATTG	NA	False	NA	NA	False	AGTAAA	-6	NA	74816647	75047420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986
ES.5438.13	chr11	+	6284	18	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	122	junction_1	11.9731533600837	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACCTCTGCTGGTCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	74816648	75055273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050733_75053645
ES.5438.14	chr11	+	5830	19	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	35.0278548769968	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816651	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050207_75050650_75050733_75053645
ES.5438.15	chr11	+	5412	16	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	37.7897105337183	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816652	75055274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.16	chr11	+	5889	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	45.5236689221438	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816654	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74832555_74832611_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.17	chr11	+	5741	8	ISM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	6	215233	6	-42991	5prime_fragment	FALSE	canonical	3	122	junction_1	14.2413597149504	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCACGGATTCTATT	NA	False	NA	NA	False	AATAAA	-13	NA	74816654	74840041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832
ES.5438.18	chr11	+	4150	19	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	53.224338858398	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816657	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74878561_74878637_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.19	chr11	+	5593	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	34.2321389220723	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816662	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645_75054616_75054848
ES.5438.2	chr11	+	5887	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	-36	-3	-36	3	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCTGGTCTATTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	74816612	75055277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.21	chr11	+	3578	14	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	21	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.3323471279824	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	74816669	75055271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.22	chr11	+	5915	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	32	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	45.1448883244632	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816680	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74818990_74819098_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.23	chr11	+	5637	18	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	32	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	35.247910929777	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACCTCTGCTGGTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	74816680	75055272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.24	chr11	+	5859	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.6658342861776	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816680	75055274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74882051_74882095_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.25	chr11	+	4130	8	ISM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	33	216817	33	-44575	5prime_fragment	FALSE	canonical	3	122	junction_1	14.2413597149504	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGAAGGGGTATTGCC	NA	False	NA	NA	False	AAGAAA	-9	NA	74816681	74838457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832
ES.5438.26	chr11	+	4247	19	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	34.764685146472	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	74816683	75055271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74821381_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.28	chr11	+	6377	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	64	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	44.9938746215816	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816712	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74818990_74819592_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.29	chr11	+	6833	19	NNC	ENSMUSG00000038290.16	novel	4078	17	NA	NA	1774	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34.5460865911818	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	74818422	75055271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74819592_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.3	chr11	+	5862	19	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-27	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.6429762357268	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816621	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836463_74836841_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.30	chr11	+	4632	18	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-523	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	35.8681746337487	350	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74820822	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050191_75050650_75050733_75053645
ES.5438.31	chr11	+	175	1	Intergenic	novelGene_4264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTTTTTTAAA	4827	False	NA	NA	False	NA	NA	NA	74836073	74836248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74836100_74836200
ES.5438.32	chr11	+	140	1	Intergenic	novelGene_4269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCAGAGCA	NA	False	NA	NA	False	NA	NA	NA	74871810	74871950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74871800_74872000
ES.5438.33	chr11	+	2284	1	Intergenic	novelGene_4270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	74875029	74877313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74875000_74877300
ES.5438.34	chr11	+	5890	1	Antisense	novelGene_ENSMUSG00000085738.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74954535	74960425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_74954500_74960400
ES.5438.35	chr11	+	175	1	Intergenic	novelGene_4273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAAAAAATCATACTT	NA	False	NA	NA	False	NA	NA	NA	74977542	74977717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_74977500_74977700
ES.5438.36	chr11	+	200	1	Intergenic	novelGene_4275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	75004858	75005058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75004900_75005100
ES.5438.37	chr11	+	5302	1	Intergenic	novelGene_4276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75008138	75013440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75008100_75013400
ES.5438.38	chr11	+	5038	4	NIC	ENSMUSG00000038290.16	novel	4078	17	NA	NA	10364	-5	intron_retention	FALSE	canonical	3	150	junction_1	2.35702260395516	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATTGACCTCTGCTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	75033624	75055269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75033730_75046986_75050214_75050650_75050733_75053645
ES.5438.39	chr11	+	5501	2	ISM	ENSMUSG00000038290.16	ENSMUST00000130145.8	4078	17	227991	0	-1122	0	intron_retention	FALSE	canonical	3	150	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	75049336	75055274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75050214_75050650
ES.5438.4	chr11	+	6098	20	NNC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.5922552591138	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGACCTCTGCTGGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	74816628	75055271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_74816830_74819358_74819592_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.5	chr11	+	4932	18	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-13	-100	intron_retention	FALSE	canonical	3	122	junction_1	11.9731533600837	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCGTGGCCGTGCTGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	74816635	75053908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050733_75053645
ES.5438.7	chr11	+	3219	11	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-11	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	44.4684157577038	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816637	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.8	chr11	+	3289	12	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	41.9042592363683	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816637	75055274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5438.9	chr11	+	3063	10	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	47.1333804808816	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAATTGACCTCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	74816647	75055266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_74816830_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ES.5439.1	chr11	-	197	1	Intergenic	novelGene_4251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTTTCATTTTGTGT	5120	False	NA	NA	False	NA	NA	NA	74517653	74517456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74517500_74517700
ES.544.1	chr1	+	1826	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGCATGGCAGCTTCCA	NA	False	NA	NA	False	NA	NA	NA	59236127	59237953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59236100_59238000
ES.5440.1	chr11	-	172	1	Intergenic	novelGene_4252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	74526361	74526189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74526200_74526400
ES.5440.13	chr11	-	4320	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-13	-1078	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	303.468244148563	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGTTGATTGTGTGT	NA	False	NA	-2	True	AATAAA	-24	NA	74615174	74565853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574395_74574476_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.14	chr11	-	4684	11	NNC	ENSMUSG00000020745.16	novel	5789	11	NA	NA	24	-1082	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	404.384717812135	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGATGGTTGTTGATTGT	NA	False	NA	-6	True	AATAAA	-20	NA	74614660	74565857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579801_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ES.5440.16	chr11	-	4363	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-65	-1083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	306.253689470102	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGATGGTTGTTGATTG	NA	False	NA	-7	True	AATAAA	-19	NA	74615226	74565858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824_74614951_74615036
ES.5440.17	chr11	-	4530	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-54	-1083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	400.724179166412	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGATGGTTGTTGATTG	NA	False	NA	-7	True	AATAAA	-19	NA	74615215	74565858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74599318_74599411_74614824
ES.5440.2	chr11	-	172	2	Intergenic	novelGene_4253	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74685390	74526196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74526260_74685281
ES.5440.20	chr11	-	4295	10	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-53	-1084	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	332.179707424598	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGATGGTTGTTGATT	NA	False	NA	-8	True	AATAAA	-18	NA	74615214	74565859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74573044_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.21	chr11	-	3895	10	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-199	-1084	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	326.915211569538	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGATGGTTGTTGATT	NA	False	NA	-8	True	AATAAA	-18	NA	74614883	74565859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74614824
ES.5440.22	chr11	-	4401	2	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	42709	1084	42022	-1084	3prime_fragment	FALSE	canonical	3	992	junction_1	0	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGATGGTTGTTGATT	767	False	NA	-8	True	AATAAA	-18	NA	74571975	74565859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_74568569_74570283
ES.5440.23	chr11	-	4368	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	81	-1086	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	401.103560337854	1083	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTCGGATGGTTGTTGA	NA	False	NA	-10	True	AATAAA	-16	NA	74615063	74565861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74598943_74599029_74614824
ES.5440.24	chr11	-	3891	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	328	1584	-7	-1583	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGAGGAGCAAAGCTG	NA	False	NA	NA	False	AATAAA	-11	NA	74615168	74566358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.25	chr11	-	3213	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	318	2272	-17	-2271	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAACTTTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	74615178	74567046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.26	chr11	-	4897	10	FSM	ENSMUSG00000020745.16	ENSMUST00000156794.2	7165	10	-5	2273	-5	-2273	multi-exon	FALSE	canonical	3	936	junction_4	82.1516213405973	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATCAACTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	74615149	74567048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.27	chr11	-	2094	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	290	3419	-45	-3418	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTGACAGTGTCATTT	NA	False	NA	NA	False	AATAAA	-22	NA	74615206	74568193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.3	chr11	-	5524	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	281	-2	-54	2	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGGGGTTTTTTTCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	74615215	74564772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.30	chr11	-	1990	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-29	-3424	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	303.468244148563	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAATAGTTGACAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	74615190	74568199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574395_74574476_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.31	chr11	-	3429	10	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-5	-3430	intron_retention	FALSE	canonical	3	947	junction_6	76.1690776828873	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACTAAACTGAATAGTTG	NA	False	NA	NA	False	AATAAA	-10	NA	74615166	74568205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.32	chr11	-	1960	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	277	3566	-58	-3565	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCATGGTGAATCCA	NA	False	NA	-1	True	ATTAAA	-16	NA	74615219	74568340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.34	chr11	-	6239	9	NIC	ENSMUSG00000020745.16	novel	7165	10	NA	NA	-2	-3565	intron_retention	FALSE	canonical	3	936	junction_3	82.4711123666948	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATGCATGGTGAATCCA	NA	False	NA	-1	True	ATTAAA	-16	NA	74615163	74568340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.36	chr11	-	4844	8	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-199	-3572	intron_retention	FALSE	canonical	3	947	junction_4	72.8733875447333	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTCATGCATGGT	NA	False	NA	-8	True	ATTAAA	-9	NA	74614883	74568347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74570283_74570441_74573060_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.37	chr11	-	1601	9	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-1	-3608	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	352.063004837202	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGATGTAGATTGAAC	NA	False	NA	-6	True	AATAAA	-22	NA	74615162	74568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.38	chr11	-	1718	11	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-44	-3608	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	315.369687826842	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGATGTAGATTGAAC	NA	False	NA	-6	True	AATAAA	-22	NA	74615540	74568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74615344
ES.5440.39	chr11	-	3284	11	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	30332	-3608	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	412.05471724032	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGATGTAGATTGAAC	6536	False	NA	-6	True	AATAAA	-22	NA	74583665	74568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581559_74581764_74582211_74582261
ES.5440.4	chr11	-	5348	10	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	422.893501463722	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGGGGTTTTTTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	74615180	74564773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74573044_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579801_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.41	chr11	-	1982	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-31	-3608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	400.724179166412	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGGATGTAGATTGAAC	NA	False	NA	-6	True	AATAAA	-22	NA	74615192	74568383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74599318_74599411_74614824
ES.5440.43	chr11	-	3257	10	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-13	-3610	intron_retention	FALSE	canonical	3	947	junction_6	76.1690776828873	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGGATGTAGATTGA	NA	False	NA	-8	True	AATAAA	-20	NA	74615174	74568385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.44	chr11	-	3072	9	NNC	ENSMUSG00000020745.16	novel	7165	10	NA	NA	-189	-3613	intron_retention	FALSE	non_canonical	0	0	junction_5	432.729256435245	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCTGGATGTAGAT	NA	False	NA	-11	True	AATAAA	-17	NA	74614873	74568388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579801_74580010_74581035_74581111_74581351_74581437_74614824
ES.5440.45	chr11	-	3615	10	FSM	ENSMUSG00000020745.16	ENSMUST00000156794.2	7165	10	-63	3613	-46	-3613	multi-exon	FALSE	canonical	3	936	junction_4	82.1516213405973	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCTGGATGTAGAT	NA	False	NA	-11	True	AATAAA	-17	NA	74615207	74568388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.46	chr11	-	2176	11	FSM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	0	3613	0	-3613	multi-exon	FALSE	canonical	3	8	junction_10	313.620790127185	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCTGGATGTAGAT	NA	False	NA	-11	True	AATAAA	-17	NA	74614684	74568388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ES.5440.47	chr11	-	2893	10	NIC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-13	-3613	intron_retention	FALSE	canonical	3	936	junction_5	77.7746031098127	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCTGGATGTAGAT	NA	False	NA	-11	True	AATAAA	-17	NA	74615174	74568388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.48	chr11	-	1953	11	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-13	-3613	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	320.131613559174	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCTGGATGTAGAT	NA	False	NA	-11	True	AATAAA	-17	NA	74615174	74568388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570197_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.49	chr11	-	1797	12	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-29	-3614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	306.253689470102	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATTCTGGATGTAGA	NA	False	NA	-12	True	AATAAA	-16	NA	74615190	74568389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824_74614957_74615041
ES.5440.50	chr11	-	2071	11	NNC	ENSMUSG00000020745.16	novel	5789	11	NA	NA	24	-3614	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	417.4482003794	1052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATTCTGGATGTAGA	NA	False	NA	-12	True	AATAAA	-16	NA	74614660	74568389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74568569_74570283_74570441_74573060_74573163_74574364_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ES.5440.51	chr11	-	165	1	Intergenic	novelGene_4255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	526	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCCAAATTTA	NA	False	NA	NA	False	NA	NA	NA	74597323	74597158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74597200_74597300
ES.5440.7	chr11	-	1708	11	NNC	ENSMUSG00000020745.16	novel	5803	11	NA	NA	-185	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	319.549698795039	1087	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGATCTGGTGGGGT	NA	False	NA	NA	False	ATTAAA	-40	NA	74614869	74564781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74565108_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.8	chr11	-	7193	10	FSM	ENSMUSG00000020745.16	ENSMUST00000156794.2	7165	10	-34	6	-17	-6	multi-exon	FALSE	canonical	3	936	junction_4	82.1516213405973	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGATCTGGTGGGGT	NA	False	NA	NA	False	ATTAAA	-40	NA	74615178	74564781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ES.5440.9	chr11	-	6049	1	NIC	ENSMUSG00000020745.16	novel	8570	9	NA	NA	43167	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTAGATCTGGTGGGGT	1912	False	NA	NA	False	ATTAAA	-40	NA	74570830	74564781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74564800_74570800
ES.5441.1	chr11	-	5689	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-943	-3	-943	3	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATGGCTATTTGTGG	NA	False	NA	0	True	AATAAA	-22	NA	74788829	74740083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.10	chr11	-	5131	23	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-12	2	intron_retention	FALSE	canonical	1	1	junction_1	20.082526017403	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787898	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74742134_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.13	chr11	-	3127	18	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	1299	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.3303172456299	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74757915	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74740901_74741596_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856
ES.5441.14	chr11	-	4611	22	NIC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	19.7085337824729	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787901	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74759467_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.15	chr11	-	4852	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.5181463325149	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787905	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745294_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.16	chr11	-	4766	25	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	19.7473187350137	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787882	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748499_74748603_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.17	chr11	-	4446	20	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-45	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_15	22.17695142519	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGCTCTGATGGCTAT	NA	False	NA	-6	True	AATAAA	-16	NA	74787931	74740089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74758436_74758572_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.18	chr11	-	4058	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5822648540954	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGCTCTGATGGCTA	NA	False	NA	-7	True	AATAAA	-15	NA	74787901	74740090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74740901_74741596_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.20	chr11	-	4625	22	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.3587681623058	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGGCTCTGATGGCT	NA	False	NA	-8	True	AATAAA	-14	NA	74787896	74740091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742650_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.21	chr11	-	4478	21	NIC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	18.0856296545075	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGGCTCTGATGGCT	NA	False	NA	-8	True	AATAAA	-14	NA	74787905	74740091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74759467_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.22	chr11	-	4713	23	NIC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	18.9658239825968	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGGCTCTGATGGCT	NA	False	NA	-8	True	AATAAA	-14	NA	74787926	74740091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759467_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.23	chr11	-	4983	25	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.2012731159889	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	NA	False	NA	-10	True	AATAAA	-12	NA	74787913	74740093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756350_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74765443_74765527_74782821_74782898_74787650
ES.5441.24	chr11	-	2856	9	NNC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	2629	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	26.3032198599335	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	7955	False	NA	-10	True	AATAAA	-12	NA	74748772	74740093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742134_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748732
ES.5441.25	chr11	-	3473	12	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	3240	-2	intron_retention	FALSE	canonical	3	35	junction_11	13.8581956537227	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	753	False	NA	-10	True	AATAAA	-12	NA	74755974	74740093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910
ES.5441.26	chr11	-	4792	23	NNC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.745412661976	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	NA	False	NA	-10	True	AATAAA	-12	NA	74787935	74740093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742558_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.28	chr11	-	4687	22	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.1671251054313	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	NA	False	NA	-10	True	AATAAA	-12	NA	74787934	74740093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74741722_74741924_74742093_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.29	chr11	-	4090	13	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-86	1148	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	25.071010261965	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCATCTTCTTTTCCCTG	NA	False	NA	NA	False	AATAAA	-20	NA	74787972	74746244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74758436_74758572_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.30	chr11	-	4298	1	NIC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-253	36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTTAGTGTCTCACAT	5073	False	NA	NA	False	NA	NA	NA	74751654	74747356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74747400_74751700
ES.5441.31	chr11	-	3062	16	ISM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	-7	7446	-7	-140	5prime_fragment	FALSE	canonical	3	35	junction_5	15.0775771705315	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCCAGCCCACAGATGG	NA	False	NA	NA	False	NA	NA	NA	74787893	74747532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.32	chr11	-	1475	3	NNC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	-931	-3401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCATGTTTCATATCCTG	NA	False	NA	NA	False	NA	NA	NA	74788817	74761665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74761898_74782821_74782898_74787650
ES.5441.33	chr11	-	1467	1	Intergenic	novelGene_4261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAGAAAACATTGTAC	NA	False	NA	NA	False	NA	NA	NA	74773017	74771550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74771600_74773000
ES.5441.34	chr11	-	5350	1	Genic_Genomic	ENSMUSG00000038351.15	novel	NA	NA	NA	NA	-33	-24305	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74787919	74782569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_74782600_74787900
ES.5441.35	chr11	-	3778	1	Genic_Genomic	ENSMUSG00000038351.15	novel	NA	NA	NA	NA	-235	-26079	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGTGCTTGAGTAC	NA	False	NA	NA	False	NA	NA	NA	74788121	74784343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_74784300_74788100
ES.5441.4	chr11	-	2821	9	NNC	ENSMUSG00000038351.15	novel	4743	23	NA	NA	2629	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	18.6681547025945	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	7955	False	NA	-4	True	AATAAA	-18	NA	74748772	74740087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748732
ES.5441.5	chr11	-	5804	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	-927	-4	-927	-1	multi-exon	FALSE	canonical	3	24	junction_12	16.1025776095344	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	74788813	74740087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.6	chr11	-	4830	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	23.8236272929062	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	74787908	74740087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750575_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759467_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.7	chr11	-	4861	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.3894520464511	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTCTGATGGCTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	74787894	74740087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754497_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5441.8	chr11	-	4663	24	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	-27	-2	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_8	18.1537229227129	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTCTGATGGCTATT	NA	False	NA	-5	True	AATAAA	-17	NA	74787913	74740088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748499_74748603_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ES.5442.1	chr11	-	5137	1	Antisense	novelGene_ENSMUSG00000038335.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACATCAGAGGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	74794813	74789676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_74789700_74794800
ES.5443.1	chr11	-	5733	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	222	-2772	-23	2332	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGACTAACCGAATTC	NA	False	NA	NA	False	AATAAA	-16	NA	74816552	74794852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ES.5443.10	chr11	-	1739	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	-213	2173	-63	1209	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCTGTACTTAGCAGA	NA	False	NA	NA	False	AAGAAA	-16	NA	74816837	74799357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.11	chr11	-	1626	9	NNC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-3	1201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	28.6964174593276	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATGTAAATTCTGTAC	NA	False	NA	NA	False	AAGAAA	-8	NA	74816532	74799365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810493_74816248
ES.5443.12	chr11	-	766	5	NNC	ENSMUSG00000001323.18	novel	2832	5	NA	NA	14618	1184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.0511788988932	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAGAAAGTGTAAGTAA	NA	False	NA	NA	False	TTTAAA	-19	NA	74801866	74799382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801792
ES.5443.13	chr11	-	1309	5	ISM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	87	4097	-8	-4	5prime_fragment	FALSE	canonical	3	15	junction_4	24.5203996704785	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGTACTCCAGCACAC	NA	False	NA	NA	False	AATAAA	-14	NA	74816537	74801281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.14	chr11	-	1859	2	Genic_Genomic	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-8	-12142	multi-exon	TRUE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74816537	74814069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_74814600_74815208
ES.5443.2	chr11	-	3815	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	131	-247	-7	247	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAGAGTACTCAAAATA	NA	False	NA	NA	False	AATAAA	-17	NA	74816493	74796937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.3	chr11	-	2947	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	242	-6	-3	0	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTATTTGGGGGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	74816532	74797618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ES.5443.4	chr11	-	2918	8	NNC	ENSMUSG00000001323.18	novel	3183	8	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_5	28.7650581683502	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATTTATTTGGGGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	74816537	74797619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801940_74802094_74802222_74803787_74803960_74816444
ES.5443.5	chr11	-	3162	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	102	435	7	-1	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATTTATTTGGGGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	74816522	74797619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.6	chr11	-	3089	8	NIC	ENSMUSG00000001323.18	novel	3699	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_2	32.2110387974086	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACATCTCATTTATTT	NA	False	NA	NA	False	AATAAA	-8	NA	74816531	74797626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_74799670_74799821_74800032_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.7	chr11	-	2064	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	87	1548	-8	-1088	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTAGAACCACTCTCT	NA	False	NA	NA	False	TTTAAA	-7	NA	74816537	74798732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5443.8	chr11	-	1793	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	273	1117	0	-1097	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGATGACCACTTAGAA	NA	False	NA	NA	False	NA	NA	NA	74816501	74798741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ES.5443.9	chr11	-	2002	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	-119	1816	31	-1356	multi-exon	FALSE	canonical	3	15	junction_8	25.2140833662459	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACAGCCCACAGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	74816743	74799000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ES.5444.1	chr11	-	172	1	Intergenic	novelGene_4262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAATGTTTTATTTTG	7668	False	NA	NA	False	NA	NA	NA	74824559	74824387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74824400_74824600
ES.5445.1	chr11	-	285	1	Intergenic	novelGene_4263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	3391	False	NA	NA	False	NA	NA	NA	74828836	74828551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74828600_74828800
ES.5446.1	chr11	-	156	1	Intergenic	novelGene_4265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	74840826	74840670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74840700_74840800
ES.5447.1	chr11	-	241	2	Antisense	novelGene_ENSMUSG00000038290.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAATGACATGCAAATT	4882	False	NA	NA	False	NA	NA	NA	74846977	74846563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_74846595_74846767
ES.5447.2	chr11	-	157	1	Intergenic	novelGene_4266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAGA	4873	False	NA	NA	False	NA	NA	NA	74846986	74846829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74846800_74847000
ES.5448.1	chr11	-	175	1	Intergenic	novelGene_4267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGATATGGAG	5385	False	NA	NA	False	NA	NA	NA	74863890	74863715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74863700_74863900
ES.5449.1	chr11	-	159	1	Intergenic	novelGene_4268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	2582	False	NA	NA	False	NA	NA	NA	74866693	74866534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74866500_74866700
ES.545.1	chr1	+	1286	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-31	NA	59268647	59269933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59268600_59269900
ES.5450.1	chr11	-	6981	1	Intergenic	novelGene_4271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTATACATTATGTAA	1274	False	NA	NA	False	NA	NA	NA	74926249	74919268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74919300_74926200
ES.5450.2	chr11	-	4721	1	Intergenic	novelGene_4272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCACAGAAGAGCAAATC	1274	False	NA	NA	False	AAGAAA	-22	NA	74926249	74921528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74921500_74926200
ES.5451.1	chr11	-	270	1	Intergenic	novelGene_4274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGTCTCTGCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	74984604	74984334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_74984300_74984600
ES.5452.1	chr11	-	3155	2	FSM	ENSMUSG00000043099.6	ENSMUST00000055619.6	3497	2	329	13	329	-13	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCCCTATAATCCTGTG	6832	False	NA	NA	False	AATAAA	-10	NA	75060016	75055403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75058371_75059828
ES.5453.1	chr11	+	3729	2	Antisense	novelGene_ENSMUSG00000078789.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAAGTCTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75073258	75078343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75076018_75077373
ES.5454.1	chr11	+	175	1	Intergenic	novelGene_4277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	75078902	75079077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75078900_75079100
ES.5455.1	chr11	-	3808	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	31	-1700	31	1700	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTCTGTAGGCCCTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	75081314	75066768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.10	chr11	-	4026	12	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	47	39	intron_retention	FALSE	canonical	3	18	junction_11	63.2122229000606	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCGGCTTATTGTGTGT	NA	False	NA	92	True	NA	NA	NA	75081298	75068429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
ES.5455.11	chr11	-	987	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	21	1662	21	197	multi-exon	FALSE	canonical	3	105	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCGGCTTATTGTGTGT	1658	False	NA	92	True	NA	NA	NA	75069640	75068429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069437
ES.5455.12	chr11	-	6545	7	NIC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	24	0	intron_retention	FALSE	canonical	3	189	junction_6	28.7136243310074	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	NA	False	NA	0	True	AATAAA	-21	NA	75081321	75068521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75076942_75081224
ES.5455.13	chr11	-	3538	12	NIC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	41	-2	intron_retention	FALSE	canonical	3	189	junction_11	24.8003599014141	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	NA	False	NA	-2	True	AATAAA	-19	NA	75081304	75068523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75076675_75076788_75076942_75081224
ES.5455.14	chr11	-	2071	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	13	55	13	-2	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	NA	False	NA	-2	True	AATAAA	-19	NA	75081332	75068523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.17	chr11	-	1953	12	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.5151059368789	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	NA	False	NA	-2	True	AATAAA	-19	NA	75081297	75068523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070136_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.18	chr11	-	2093	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTTCTCCTGCTGCC	NA	False	NA	-2	True	AATAAA	-19	NA	75081299	75068523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
ES.5455.19	chr11	-	4749	9	NIC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	48	-3	intron_retention	FALSE	canonical	3	189	junction_8	20.2731349327133	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCCTGCTGC	NA	False	NA	-3	True	AATAAA	-18	NA	75081297	75068524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75076675_75076788_75076942_75081224
ES.5455.2	chr11	-	2669	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	-2	3	-2	-3	multi-exon	FALSE	canonical	3	105	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCTGTAGGCCCTG	1635	False	NA	NA	False	AATAAA	-15	NA	75069663	75066770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069437
ES.5455.20	chr11	-	3764	12	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	49	-5	intron_retention	FALSE	canonical	2	5	junction_11	68.6419624447354	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATGCCTTTCTCCTGCT	NA	False	NA	-5	True	AATAAA	-16	NA	75081296	75068526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75076675_75076788_75076942_75080987
ES.5455.21	chr11	-	2017	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	43	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	66.4918541376812	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGAATGCCTTTCTCCT	NA	False	NA	-8	True	AATAAA	-13	NA	75081302	75068529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070621_75071394_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.23	chr11	-	1961	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	47	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	67.3120841058028	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTGAATGCCTTTCTC	NA	False	NA	-10	True	AATAAA	-11	NA	75081298	75068531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076874_75081224
ES.5455.24	chr11	-	1856	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	48	235	48	-182	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCACTGCTCCCACTTTG	NA	False	NA	NA	False	AATGAA	-16	NA	75081297	75068703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.25	chr11	-	1630	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	52	457	52	196	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATCTTGCAGAGCCCC	NA	False	NA	NA	False	NA	NA	NA	75081293	75068925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.3	chr11	-	3681	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	24	-1566	24	1566	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAATTGGTGGGTTTGC	NA	False	NA	7	True	TATAAA	-25	NA	75081321	75066902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.5	chr11	-	2479	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	29	162	-19	-162	multi-exon	FALSE	canonical	3	105	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTGGTCTATTTGC	1666	False	NA	-20	True	NA	NA	NA	75069632	75066929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069437
ES.5455.6	chr11	-	2451	14	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	45	1539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.9738226760293	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTGGTCTATTTGC	NA	False	NA	-20	True	NA	NA	NA	75081300	75066929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75067152_75068333_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5455.7	chr11	-	3691	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	42	1539	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTGGTCTATTTGC	NA	False	NA	-20	True	NA	NA	NA	75081303	75066929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
ES.5455.8	chr11	-	3688	14	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	46	1539	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	99.6132164896219	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTTGGTCTATTTGC	NA	False	NA	-20	True	NA	NA	NA	75081299	75066929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75075762_75075881_75076610_75076675_75076788_75076880_75081224
ES.5455.9	chr11	-	2153	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	43	-57	43	57	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTGCAGACTTGTGG	NA	False	NA	NA	False	TTTAAA	-16	NA	75081302	75068411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ES.5456.1	chr11	+	3535	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	-10	0	-10	0	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTTTATTTCCTAA	NA	False	NA	8	True	AATAAA	-19	NA	75084598	75158595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75085121_75155582
ES.5456.2	chr11	+	2685	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	30	810	30	-810	multi-exon	FALSE	canonical	3	24	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGGCAATTTTGTTCAGA	NA	False	NA	NA	False	AAGAAA	-16	NA	75084638	75157785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75085121_75155582
ES.5456.3	chr11	+	1920	1	Intergenic	novelGene_4279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAAAATGGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	75099538	75101458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75099500_75101500
ES.5456.4	chr11	+	2640	1	Intergenic	novelGene_4281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATGCCAAGGGCTAAA	NA	False	NA	NA	False	NA	NA	NA	75128224	75130864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75128200_75130900
ES.5457.1	chr11	-	173	1	Intergenic	novelGene_4278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75098062	75097889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75097900_75098100
ES.5458.1	chr11	-	200	1	Intergenic	novelGene_4280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGAACCAGTAAGA	NA	False	NA	NA	False	NA	NA	NA	75112928	75112728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75112700_75112900
ES.5459.1	chr11	-	184	1	Intergenic	novelGene_4282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	75144634	75144450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75144400_75144600
ES.546.1	chr1	-	8017	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	50	1733	intron_retention	TRUE	canonical	2	11	junction_10	24.2459088404716	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAATGTTTAATTACAAT	NA	False	NA	NA	False	TTTAAA	-29	NA	59276335	59200351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217856_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.12	chr1	-	5424	33	NIC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	-7	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	26.0585091368923	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTTCTATGACTG	NA	False	NA	-3	True	AATAAA	-15	NA	59276397	59202089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59257085_59257241_59259533_59259612_59276313
ES.546.13	chr1	-	4104	7	NIC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	44022	-5	intron_retention	FALSE	canonical	3	104	junction_5	14.1656862405839	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTTCTATGACTG	NA	False	NA	-3	True	AATAAA	-15	NA	59214263	59202089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59209719_59212314_59212473_59214082
ES.546.14	chr1	-	6513	33	NIC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	2	-5	intron_retention	FALSE	canonical	2	89	junction_11	16.224980739588	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTTCTATGACTG	NA	False	NA	-3	True	AATAAA	-15	NA	59276383	59202089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59203375_59206341_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.16	chr1	-	6345	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.4754603830108	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTTCTATGACTG	NA	False	NA	-3	True	AATAAA	-15	NA	59276401	59202089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233251_59235345_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.17	chr1	-	5944	31	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	3126	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_25	26.2039225223163	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTTCTATGACTG	NA	False	NA	-3	True	AATAAA	-15	NA	59255159	59202089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242135_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260
ES.546.18	chr1	-	6377	33	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	1043	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	36.7668833454442	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59257242	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59216851_59217108_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242135_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085
ES.546.19	chr1	-	6297	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	25.4754603830108	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276353	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235351_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.2	chr1	-	7176	34	FSM	ENSMUSG00000079550.10_ENSMUSG00000026024.15	ENSMUST00000163058.2	5379	34	12	-1809	12	677	multi-exon	FALSE	canonical	1	7	junction_33	24.7049067000806	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAATCTCCAGGCACTG	NA	False	NA	NA	False	AATAAA	-22	NA	59276240	59201407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276006
ES.546.20	chr1	-	6247	33	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	29	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	25.8638260897339	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276356	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257264_59276313
ES.546.21	chr1	-	2444	3	ISM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	68706	6	50601	-6	intron_retention	FALSE	canonical	3	136	junction_2	7	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59207684	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_59203375_59206341_59206439_59206621
ES.546.22	chr1	-	6452	35	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	31.4911560056851	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276402	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59270460_59270565_59276313
ES.546.24	chr1	-	6125	33	NIC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	29	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	25.7201738670251	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276356	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.25	chr1	-	6115	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	50	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	32.0246977693409	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276335	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225616_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250484_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.26	chr1	-	6252	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	13	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	25.1377837653888	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGCTGTTCTATGACT	NA	False	NA	-4	True	AATAAA	-14	NA	59276372	59202090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226543_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.28	chr1	-	5170	34	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_10	24.2459088404716	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTTGTAATTTCTGA	NA	False	NA	NA	False	AATACA	-18	NA	59276353	59203216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217856_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.29	chr1	-	4948	32	NIC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_31	26.0034016825391	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTTGTAATTTCTGA	NA	False	NA	NA	False	AATACA	-18	NA	59276361	59203216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59276313
ES.546.31	chr1	-	3002	13	FSM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	-5	-20	-5	20	multi-exon	FALSE	canonical	2	94	junction_2	9.94847838728226	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTATGTGTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	59276395	59230747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.32	chr1	-	2875	13	NNC	ENSMUSG00000026024.15	novel	2977	13	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.1692192903254	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGGGCCCCATTAAGC	NA	False	NA	NA	False	NA	NA	NA	59276355	59230767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242135_59242252_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.33	chr1	-	1902	3	ISM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	19	24707	14	28	5prime_fragment	FALSE	canonical	3	121	junction_2	3	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCTCATATCATGGC	NA	False	NA	NA	False	NA	NA	NA	59276371	59255474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_59257241_59259533_59259612_59276313
ES.546.34	chr1	-	4143	2	ISM	ENSMUSG00000026024.15	ENSMUST00000160945.2	521	3	30	701	30	-8	5prime_fragment	FALSE	canonical	3	121	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	59276355	59255510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_59259612_59276313
ES.546.35	chr1	-	181	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATATGAACCC	NA	False	NA	NA	False	NA	NA	NA	59271489	59271308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59271300_59271500
ES.546.4	chr1	-	6396	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	-54	0	-54	0	multi-exon	FALSE	canonical	2	89	junction_12	16.3968238094348	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTATGACTGTGGAA	NA	False	NA	2	True	AATAAA	-20	NA	59276444	59202084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.6	chr1	-	6589	34	Fusion	ENSMUSG00000079550.10_ENSMUSG00000026024.15	novel	5379	34	NA	NA	57	-2	multi-exon	FALSE	canonical	1	7	junction_33	28.7992322109675	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTCTATGACTGTGG	NA	False	NA	0	True	AATAAA	-18	NA	59276328	59202086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235345_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276006
ES.546.7	chr1	-	9632	35	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	31.3645271606929	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTTCTATGACTGTG	NA	False	NA	-1	True	AATAAA	-17	NA	59276390	59202087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59215583_59215738_59217609_59217649_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ES.546.8	chr1	-	5915	31	NNC	ENSMUSG00000026024.15	novel	6342	34	NA	NA	1134	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.1713564523504	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCTGTTCTATGACTGT	NA	False	NA	-2	True	AATAAA	-16	NA	59257151	59202088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208991_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085
ES.5460.1	chr11	+	157	1	Intergenic	novelGene_4283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75164900	75165057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75164900_75165100
ES.5461.1	chr11	-	9779	2	Intergenic	novelGene_4284	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAAGCTGGCTTCTAC	8093	False	NA	NA	False	AATAAA	-16	NA	75187221	75177399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75179810_75179852
ES.5462.1	chr11	+	170	1	Intergenic	novelGene_4285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATACCTTTAAAAA	742	False	NA	NA	False	NA	NA	NA	75194736	75194906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75194700_75194900
ES.5463.1	chr11	+	175	1	Intergenic	novelGene_4286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	6477	False	NA	NA	False	NA	NA	NA	75200471	75200646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75200500_75200600
ES.5464.1	chr11	+	4359	4	Antisense	novelGene_ENSMUSG00002076300.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	117	False	NA	NA	False	NA	NA	NA	75206946	75235148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75207062_75209235_75209357_75219497_75219587_75231114
ES.5464.2	chr11	+	2515	2	Antisense	novelGene_ENSMUSG00002076300.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACATGTACCTATTC	117	False	NA	NA	False	NA	NA	NA	75206946	75211635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75207062_75209235
ES.5464.3	chr11	+	4689	1	Antisense	novelGene_ENSMUSG00002076300.1_AS_novelGene_ENSMUSG00000000751.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACACATGTACCTATTC	117	False	NA	NA	False	NA	NA	NA	75206946	75211635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75206900_75211600
ES.5464.4	chr11	+	3757	5	Antisense	novelGene_ENSMUSG00002076300.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAACCACCAACCAAAG	117	False	NA	NA	False	NA	NA	NA	75206946	75235174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75207062_75209235_75209357_75219497_75219586_75231112_75231225_75231853
ES.5464.6	chr11	+	2272	2	Antisense	novelGene_ENSMUSG00000000751.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGGACCC	NA	False	NA	NA	False	NA	NA	NA	75228405	75230834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75229743_75229899
ES.5465.1	chr11	+	178	1	Intergenic	novelGene_4287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACTATTC	NA	False	NA	NA	False	NA	NA	NA	75237840	75238018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75237800_75238000
ES.5466.1	chr11	-	5048	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	29	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTCTGACTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	75239121	75188991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.10	chr11	-	3780	16	NIC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	0	2	intron_retention	FALSE	canonical	3	1486	junction_1	170.586231045247	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTTGACTGTAAAGGA	NA	False	NA	-14	True	AATAAA	-23	NA	75239136	75191173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75196933_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.12	chr11	-	2604	16	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	1112	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	430.299874764358	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75231902	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75197986_75198095_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853
ES.5466.13	chr11	-	2906	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	438.7741045729	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239173	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209347_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.14	chr11	-	6997	15	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	29	1	intron_retention	FALSE	canonical	0	0	junction_9	618.707494932552	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239090	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75209439_75209619_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.18	chr11	-	2845	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	438.472134234321	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239121	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204172_75205634_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.2	chr11	-	4003	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	49	1025	18	-1025	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTTGTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	75239101	75190016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.20	chr11	-	2823	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	29	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	438.843005633849	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239090	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205731_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.21	chr11	-	3122	16	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	2	1	intron_retention	FALSE	canonical	3	1486	junction_1	164.566042129664	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239134	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.23	chr11	-	6235	16	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-2	1	intron_retention	FALSE	canonical	3	1486	junction_1	170.66453123664	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239138	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.24	chr11	-	2843	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	424.516636894245	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239121	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231911_75232969_75233021_75239051
ES.5466.26	chr11	-	4752	6	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	29843	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	642.163842021645	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75203171	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75194733_75194939_75197042_75197940_75198118_75200958_75201092_75203125
ES.5466.29	chr11	-	2842	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	438.7741045729	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75239118	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209338_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.3	chr11	-	3055	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	-70	2092	-70	92	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACTCAGAGATTAGACT	NA	False	NA	8	True	AATAAA	-30	NA	75239220	75191083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.30	chr11	-	2636	4	ISM	ENSMUSG00000000751.14	ENSMUST00000135770.8	2040	17	33688	-956	33688	1	3prime_fragment	FALSE	canonical	3	1486	junction_1	95.0368349641338	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTTTGACTGTAAAGG	NA	False	NA	-15	True	AATAAA	-22	NA	75199326	75191174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940
ES.5466.33	chr11	-	2796	17	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	1	42	junction_5	429.498794927006	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239104	75191175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201041_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.35	chr11	-	2908	17	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	438.162172995057	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239142	75191175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193604_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.36	chr11	-	3724	9	NIC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	26006	0	intron_retention	FALSE	canonical	3	1486	junction_1	70.7423803317361	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75207008	75191175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638
ES.5466.39	chr11	-	3068	16	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	57	junction_9	439.546857570385	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239136	75191175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206985_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.4	chr11	-	2776	15	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	2	87	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	427.890077435019	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACAGACTCAGAGATT	NA	False	NA	3	True	AATAAA	-25	NA	75239134	75191088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75232969_75233021_75239051
ES.5466.40	chr11	-	4542	15	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1486	junction_1	130.04598872581	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTCTTTGACTGTAAA	NA	False	NA	-17	True	AATAAA	-20	NA	75239134	75191176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75233021_75239051
ES.5466.41	chr11	-	2903	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	438.919905670442	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTCTTTGACTGTAAA	NA	False	NA	-17	True	AATAAA	-20	NA	75239137	75191176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201116_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.42	chr11	-	2830	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	671.693428954013	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTCTTTGACTGTAAA	NA	False	NA	-17	True	AATAAA	-20	NA	75239102	75191176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203278_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206942_75207064_75209237_75209358_75219498_75219583_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.43	chr11	-	4246	13	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	17854	4	11732	-4	3prime_fragment	FALSE	canonical	3	1486	junction_1	75.5404141282444	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTACTTTCTTTGACTGT	NA	False	NA	-20	True	AATAAA	-17	NA	75221282	75191179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498
ES.5466.45	chr11	-	2733	9	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	28219	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	533.382235713752	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTACTTTCTTTGACTGT	NA	False	NA	-20	True	AATAAA	-17	NA	75204795	75191179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75204024_75204126
ES.5466.47	chr11	-	4134	16	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	2	-7	intron_retention	FALSE	canonical	3	1501	junction_8	162.923894980311	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTACTTTCTTTGAC	NA	False	NA	-23	True	AATAAA	-14	NA	75239134	75191182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.48	chr11	-	3012	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	19	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	431.72886456664	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATCCTACTTTCTTTG	NA	False	NA	-25	True	AATAAA	-12	NA	75239100	75191184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75238873
ES.5466.49	chr11	-	2904	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	-23	2196	-23	-12	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGATCCTACTTTCT	NA	False	NA	-28	True	AATAAA	-9	NA	75239173	75191187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.5	chr11	-	2700	16	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	4	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	452.791882534227	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAACTCATTACAGAC	NA	False	NA	-6	True	AATAAA	-16	NA	75239146	75191097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203235_75203890_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.50	chr11	-	2932	18	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	17	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	565.371623504717	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGATCCTACTTTCT	NA	False	NA	-28	True	AATAAA	-9	NA	75239102	75191187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75192508_75192608_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.54	chr11	-	2392	18	NNC	ENSMUSG00000000751.14	novel	2942	18	NA	NA	21	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	425.815131191409	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAAGCTTTGTTTCC	NA	False	NA	-18	True	ATTAAA	-20	NA	75239098	75191234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75191436_75191825_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.55	chr11	-	2785	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	16	-59	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	438.472134234321	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAAGCTTTGTTTCC	NA	False	NA	-18	True	ATTAAA	-20	NA	75239103	75191234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204190_75205634_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.56	chr11	-	2572	16	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	19	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	451.954687994272	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAAGCTTTGTTTCC	NA	False	NA	-18	True	ATTAAA	-20	NA	75239100	75191234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192105_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.57	chr11	-	5265	15	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-7	-60	intron_retention	FALSE	canonical	1	57	junction_9	440.669110905362	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGAAGCTTTGTTTC	NA	False	NA	-19	True	ATTAAA	-19	NA	75239157	75191235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75205742_75206985_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75233021_75239051
ES.5466.58	chr11	-	4374	1	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-2056	2107	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1039	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATGTACTTTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	75235070	75230696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75230700_75235100
ES.5466.59	chr11	-	722	4	ISM	ENSMUSG00000000751.14	ENSMUST00000154894.2	716	7	-17	23854	-2	2084	5prime_fragment	FALSE	canonical	3	1885	junction_3	45.784519460427	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	AATACA	-31	NA	75239138	75230719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.6	chr11	-	3098	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-23	78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	428.549948773477	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTAACTCATTACAGAC	NA	False	NA	-6	True	AATAAA	-16	NA	75239173	75191097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231329_75231853_75231933_75232969_75233021_75239051
ES.5466.8	chr11	-	6165	17	NNC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-7	73	intron_retention	FALSE	non_canonical	0	0	junction_2	580.724439816338	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATGTTAACTCATTA	NA	False	NA	-11	True	AATAAA	-11	NA	75239157	75191102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75192230_75193493_75193819_75194016_75194733_75194939_75197042_75197940_75198118_75200958_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5466.9	chr11	-	2776	16	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	451.316119809607	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGACTGTAAAGGAT	NA	False	NA	-13	True	AATAAA	-24	NA	75239138	75191172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75192230_75193493_75193581_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ES.5467.1	chr11	+	3327	10	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-28	0	intron_retention	TRUE	canonical	1	2	junction_2	31.3526339295599	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239292	75296531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75278236_75278316_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.10	chr11	+	3276	11	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.4040980165217	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAACTCTGTATTGGT	NA	False	NA	29	True	AATAAA	-31	NA	75239307	75296525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.11	chr11	+	3731	5	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	8	4900	intron_retention	FALSE	canonical	0	0	junction_4	39.1088225340523	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGCAGTATCATTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	75239328	75286400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75278236_75278327_75280897_75282054_75284310
ES.5467.12	chr11	+	3238	10	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	8	-14	intron_retention	FALSE	canonical	0	0	junction_6	32.9054012602607	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGGATGGCAACTCT	NA	False	NA	21	True	AATAAA	-23	NA	75239328	75296517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292993_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.13	chr11	+	2858	11	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	15	-396	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.4040980165217	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	75239335	75296135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.14	chr11	+	1866	5	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	20	648	intron_retention	FALSE	non_canonical	0	0	junction_2	34.3247359785913	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGACCTAAAAGGAAAA	NA	False	NA	NA	False	AATAAA	-1	NA	75239340	75282148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75273078_75273221_75278236_75278327_75280897
ES.5467.15	chr11	+	3297	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	20	-21	intron_retention	FALSE	canonical	2	2	junction_8	24.8481809951037	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTTCTTCCTGGGATGG	NA	False	NA	14	True	AATAAA	-16	NA	75239340	75296510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75294242_75294367_75295591
ES.5467.16	chr11	+	2206	8	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	24	18	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	24.7122212184785	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAGAAATTTACTTGCT	NA	False	NA	NA	False	NA	NA	NA	75239344	75291477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107
ES.5467.17	chr11	+	4761	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	28	-338	intron_retention	FALSE	canonical	3	66	junction_2	8.08290376865476	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCACTGATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	75239348	75296193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.19	chr11	+	3850	6	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	30	4896	intron_retention	FALSE	canonical	0	0	junction_5	30.8194743628116	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGATTGGCAGTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	75239350	75286396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75284310
ES.5467.2	chr11	+	3176	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	34	307	-28	-307	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTAGGCTTTTGGCTCG	NA	False	NA	NA	False	NA	NA	NA	75239292	75296224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.20	chr11	+	2937	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	32	-396	intron_retention	FALSE	canonical	0	0	junction_3	25.4213869326645	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	75239352	75296135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.22	chr11	+	3318	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	97	102	35	-102	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCCTGCTTCCTTAAAT	NA	False	NA	-67	True	AAGAAA	-44	NA	75239355	75296429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.23	chr11	+	3880	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	79	-354	intron_retention	FALSE	canonical	3	60	junction_7	9.67368838207952	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	75239399	75296177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75294052_75294242_75294367_75295591
ES.5467.24	chr11	+	3118	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	102	-102	intron_retention	FALSE	canonical	0	0	junction_7	25.623099146601	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCCTGCTTCCTTAAAT	NA	False	NA	-67	True	AAGAAA	-44	NA	75239422	75296429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75293934_75294052_75294242_75294367_75295591
ES.5467.25	chr11	+	2986	1	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	876	658	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAACACAGCCGTC	7093	False	NA	NA	False	AATAAA	-11	NA	75279172	75282158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75279200_75282200
ES.5467.26	chr11	+	2640	8	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	2875	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5407211117453	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTCCTGGGATGGCA	9092	False	NA	16	True	AATAAA	-18	NA	75281171	75296512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75282054_75284310_75284427_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.27	chr11	+	4589	5	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	3336	-23	intron_retention	FALSE	canonical	3	70	junction_4	9.83298021964857	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTTTCTTCCTGGGAT	9553	False	NA	12	True	AATAAA	-14	NA	75281632	75296508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75282054_75290426_75290610_75291107_75294052_75294242_75294367_75295591
ES.5467.28	chr11	+	5218	2	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	681	-7	intron_retention	FALSE	canonical	3	80	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGCAACTCTGTATTGG	NA	False	NA	28	True	AATAAA	-30	NA	75291115	75296524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75294052_75294242
ES.5467.29	chr11	+	1809	1	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	3892	-396	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	75294326	75296135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75294300_75296100
ES.5467.3	chr11	+	3360	12	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-28	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	20.2051462227893	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAACTCTGTATTGGT	NA	False	NA	29	True	AATAAA	-31	NA	75239292	75296525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.4	chr11	+	3481	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	36	0	-26	0	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239294	75296531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.5	chr11	+	3469	11	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-23	2	intron_retention	FALSE	canonical	3	6	junction_4	22.7473075329807	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTGGTTTCCTACC	NA	False	NA	37	True	AATAAA	-39	NA	75239297	75296533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278316_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.6	chr11	+	3334	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-22	2	intron_retention	FALSE	canonical	1	2	junction_2	24.9701055832671	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTGGTTTCCTACC	NA	False	NA	37	True	AATAAA	-39	NA	75239298	75296533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.7	chr11	+	3019	12	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-19	-338	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	20.2051462227893	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCACTGATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	75239301	75296193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.8	chr11	+	5129	10	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-15	-13	intron_retention	FALSE	canonical	3	66	junction_2	8.08290376865476	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGATGGCAACTCTG	NA	False	NA	22	True	AATAAA	-24	NA	75239305	75296518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75293077_75293934_75294052_75294242_75294367_75295591
ES.5467.9	chr11	+	3003	10	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	-14	-338	intron_retention	FALSE	canonical	2	2	junction_8	31.0368160515425	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCACTGATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	75239306	75296193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278316_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75294242_75294367_75295591
ES.5468.1	chr11	-	998	1	Intergenic	novelGene_4288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75244002	75243004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75243000_75244000
ES.5469.1	chr11	+	182	1	Intergenic	novelGene_4289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	75299787	75299969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75299800_75300000
ES.547.1	chr1	-	178	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGGTAAATA	NA	False	NA	NA	False	NA	NA	NA	59286336	59286158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59286200_59286300
ES.5470.1	chr11	+	477	2	Antisense	novelGene_ENSMUSG00000085359.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAACAAATGTTTTGTA	NA	False	NA	NA	False	TTTAAA	-21	NA	75313469	75315296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_75313651_75315000
ES.5471.1	chr11	-	1578	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	-8	262	-8	33	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTGCTTCTTCCTTCT	5370	False	NA	0	True	AATAAA	-14	NA	75313535	75300856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ES.5471.2	chr11	-	1491	7	NIC	ENSMUSG00000000753.16	novel	1832	8	NA	NA	-11	31	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	10.6523341208499	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTTGCTTCTTCCTT	5367	False	NA	-2	True	AATAAA	-12	NA	75313538	75300858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75313321
ES.5472.1	chr11	+	178	1	Intergenic	novelGene_4290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAGAAAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	75324729	75324907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75324700_75324900
ES.5473.1	chr11	-	276	1	NIC	ENSMUSG00000038224.13	novel	2179	10	NA	NA	1075	-1117	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCATGCTACCCTCAA	8148	False	NA	NA	False	NA	NA	NA	75328651	75328375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75328400_75328700
ES.5473.2	chr11	-	159	1	Intergenic	novelGene_4291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	8148	False	NA	NA	False	NA	NA	NA	75328651	75328492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75328500_75328700
ES.5474.1	chr11	-	6903	10	FSM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	4	1	4	-1	multi-exon	TRUE	canonical	2	7	junction_2	4.57043640026736	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGGCTGTGTTGTGTT	2813	False	NA	-1	True	AATAAA	-24	NA	75345539	75331770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.10	chr11	-	4948	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	4	6714	4	509	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTTCTTCATGTTCT	2813	False	NA	NA	False	NA	NA	NA	75345539	75338483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.2	chr11	-	6897	10	NNC	ENSMUSG00000045374.19	novel	6908	10	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.40216012928353	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTGAGGCTGTGTTG	2848	False	NA	-5	True	AATAAA	-20	NA	75345504	75331774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338656_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.3	chr11	-	6908	11	NNC	ENSMUSG00000045374.19	novel	6908	10	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.38827050147378	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTGAGGCTGTGTT	2848	False	NA	-6	True	AATAAA	-19	NA	75345504	75331775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75340856_75340902_75341619
ES.5474.4	chr11	-	3850	3	ISM	ENSMUSG00000045374.19	ENSMUST00000117392.9	6625	10	7211	2	2553	0	intron_retention	FALSE	canonical	2	7	junction_2	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGTGAGGCTGTGTT	6269	False	NA	-6	True	AATAAA	-19	NA	75338053	75331775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75332916_75335080_75335261_75335523
ES.5474.5	chr11	-	5180	10	NNC	ENSMUSG00000045374.19	novel	6908	10	NA	NA	1386	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	6.40216012928353	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGAGTGAGGCTGTG	4474	False	NA	-8	True	AATAAA	-17	NA	75343878	75331777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338744_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.6	chr11	-	8667	9	NIC	ENSMUSG00000045374.19	novel	6908	10	NA	NA	2	-3	intron_retention	FALSE	canonical	2	7	junction_2	4.6837484987988	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAGCTGAGTGAGGCTGT	2811	False	NA	-9	True	AATAAA	-16	NA	75345541	75331778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.7	chr11	-	6714	9	FSM	ENSMUSG00000045374.19	ENSMUST00000132442.2	3088	9	-3630	4	4	-4	multi-exon	FALSE	canonical	0	0	junction_1	6.43719659479187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGAGCTGAGTGAGGCTG	2813	False	NA	-10	True	AATAAA	-15	NA	75345539	75331779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75332916_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.8	chr11	-	5960	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	26	5680	26	1543	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACCAAGACAGTGACTTA	2835	False	NA	NA	False	AATAAA	-19	NA	75345517	75337449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5474.9	chr11	-	5274	6	ISM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	-12	6404	-12	819	5prime_fragment	FALSE	canonical	2	11	junction_3	4.04969134626332	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTGTTTTTGTTAA	2797	False	NA	NA	False	NA	NA	NA	75345555	75338173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ES.5475.1	chr11	+	186	1	Intergenic	novelGene_4292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAGGGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	75347021	75347207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75347000_75347200
ES.5476.1	chr11	+	5067	1	FSM	ENSMUSG00000065529.3	ENSMUST00000083595.3	95	1	-2091	-2881	-2091	2881	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTTTATGAGTGTTTTG	3924	False	NA	23	True	AATAAA	-34	NA	75352450	75357517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75352400_75357500
ES.5476.2	chr11	+	1665	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	106	-19	1	19	multi-exon	FALSE	canonical	3	9	junction_2	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGAGTGTTTTGCCTG	3944	False	NA	27	True	AATAAA	-38	NA	75352470	75357521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75352582_75354518_75354684_75356132
ES.5476.3	chr11	+	3104	2	FSM	ENSMUSG00000085148.2	ENSMUST00000134345.2	449	2	6	-2661	6	14	multi-exon	FALSE	canonical	3	22	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTTATGAGTGTTTT	3949	False	NA	22	True	AATAAA	-33	NA	75352475	75357516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75352582_75354518
ES.5476.4	chr11	+	1454	6	NNC	ENSMUSG00000038217.14	novel	564	5	NA	NA	-60	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.3506554146229	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTCTCTTGTGAATGT	3954	False	NA	27	True	AATAAA	-19	NA	75352480	75361720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75352582_75354518_75354684_75359382_75359466_75359667_75359751_75360297_75360926_75361326
ES.5476.5	chr11	+	2199	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	-307	1	-307	-1	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCTTGTGAATGTGATT	NA	False	NA	31	True	AATAAA	-23	NA	75358597	75361724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
ES.5476.6	chr11	+	1548	5	NNC	ENSMUSG00000038217.14	novel	1153	5	NA	NA	-62	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	13.1220234720107	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGTCTCTTGTGAATG	NA	False	NA	26	True	AATAAA	-18	NA	75358842	75361719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297_75360926_75361326
ES.5476.7	chr11	+	1689	3	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	374	9	-258	-9	intron_retention	FALSE	canonical	3	28	junction_2	3	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATCAGTCTCTTGTGA	NA	False	NA	23	True	AATAAA	-15	NA	75359278	75361716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75359466_75359667_75359751_75360297
ES.5477.1	chr11	+	206	2	Intergenic	novelGene_4293	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75361966	75409278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75362135_75409240
ES.5477.10	chr11	+	7368	42	NNC	ENSMUSG00000020850.15	novel	7249	43	NA	NA	-4	1	intron_retention	FALSE	non_canonical	0	0	junction_19	179.083468686231	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTTGCTGTTAT	NA	False	NA	19	True	AATAAA	-16	NA	75377637	75400274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386249_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.11	chr11	+	7426	42	NNC	ENSMUSG00000020850.15	novel	7249	43	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	178.754784696116	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75377645	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75378018_75378450_75378620_75380573_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392287_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.13	chr11	+	8210	39	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	5	-2	intron_retention	FALSE	canonical	3	217	junction_5	155.033094492149	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75377650	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399487_75399592_75399796_75399960
ES.5477.14	chr11	+	8636	38	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_1	171.017545095409	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377655	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75377716_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.18	chr11	+	7294	41	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	14	-1	intron_retention	FALSE	canonical	0	0	junction_32	169.780591867858	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTTCTTGCTGTT	NA	False	NA	17	True	AATAAA	-14	NA	75377659	75400272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.19	chr11	+	7293	43	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_41	167.471277193456	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377659	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399640_75399770_75399796_75399960
ES.5477.2	chr11	+	187	1	Intergenic	novelGene_4295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTTATTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	75369383	75369570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75369400_75369600
ES.5477.21	chr11	+	7798	40	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	217	junction_5	159.151303512095	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75377672	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.23	chr11	+	7736	39	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	1	0	intron_retention	FALSE	canonical	3	217	junction_5	160.785657634103	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377681	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.26	chr11	+	1566	2	ISM	ENSMUSG00000020850.15	ENSMUST00000131283.3	3371	19	20	6947	20	-5062	5prime_fragment	FALSE	canonical	3	233	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAATAACAACAACTTCT	NA	False	NA	NA	False	NA	NA	NA	75377700	75379699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75378018_75378450
ES.5477.28	chr11	+	7335	41	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	182	-1	intron_retention	FALSE	canonical	0	0	junction_39	161.352562344079	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGTTTTCTTGCTGTT	NA	False	NA	17	True	AATAAA	-14	NA	75377862	75400272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399491_75399592_75399796_75399960
ES.5477.29	chr11	+	7246	41	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	240	0	intron_retention	FALSE	canonical	3	217	junction_5	157.319610983501	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377920	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.3	chr11	+	167	1	Intergenic	novelGene_4297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	75374401	75374568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75374400_75374600
ES.5477.30	chr11	+	7148	40	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	803	-2	intron_retention	FALSE	canonical	3	217	junction_4	156.912975206951	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75378483	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.31	chr11	+	7094	40	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	847	-2	intron_retention	FALSE	canonical	0	0	junction_15	168.389564299251	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75378527	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75378620_75380567_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385483_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.33	chr11	+	6896	40	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	2921	4	-2505	-2	3prime_fragment	FALSE	canonical	3	217	junction_3	155.793609994721	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75380566	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.34	chr11	+	6733	39	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	3177	2	-2249	0	3prime_fragment	FALSE	canonical	3	217	junction_2	154.518867237661	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75380822	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.4	chr11	+	7467	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	-16	-9	-16	7	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTGTTATGAGGTCAA	NA	False	NA	27	True	AATAAA	-24	NA	75377625	75400282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.40	chr11	+	6423	20	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	1626	0	intron_retention	TRUE	non_canonical	0	0	junction_10	205.317212855466	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75384697	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386647_75386855_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75393150_75393869_75394335_75394442_75394572_75395303_75395418_75395530_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399796_75399960
ES.5477.42	chr11	+	3616	21	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	4115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	161.304455921094	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75387186	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395385_75395544_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.43	chr11	+	2836	17	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	4162	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	178.224303459854	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75387233	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75387378_75387788_75387906_75390624_75390873_75390974_75391013_75392686_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.44	chr11	+	3081	19	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	7740	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	164.687095748795	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75390811	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75390873_75390974_75391155_75391337_75391474_75391591_75391638_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.45	chr11	+	2919	17	NNC	ENSMUSG00000020850.15	novel	7249	43	NA	NA	8292	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	173.204618425	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTTGCTGTTAT	NA	False	NA	19	True	AATAAA	-16	NA	75391363	75400274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394311_75394438_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.46	chr11	+	2830	16	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	13944	2	8518	0	3prime_fragment	FALSE	canonical	3	463	junction_3	102.250324639528	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75391589	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.48	chr11	+	1655	9	ISM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	17656	10	12230	-8	3prime_fragment	FALSE	canonical	3	507	junction_3	94.3673010104665	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTTTGTTTTCT	NA	False	NA	10	True	AATAAA	-7	NA	75395301	75400265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.49	chr11	+	512	1	NIC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	12806	-3884	mono-exon	FALSE	NA	NA	NA	NA	NA	600	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAAATAACATCT	NA	False	NA	NA	False	NA	NA	NA	75395877	75396389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75395900_75396400
ES.5477.50	chr11	+	2170	3	ISM	ENSMUSG00000038195.7	ENSMUST00000156923.2	1276	6	164	-1	164	1	intron_retention	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTCTCAGTCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	75401456	75403990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75401565_75401647_75401834_75402114
ES.5477.51	chr11	+	3054	4	Fusion	ENSMUSG00000038195.7_ENSMUSG00000038188.18	novel	1276	6	NA	NA	1023	2708	intron_retention	FALSE	canonical	1	2	junction_1	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	75402315	75406702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_75403261_75403524_75404517_75404830_75405237_75405991
ES.5477.52	chr11	+	2892	11	FSM	ENSMUSG00000038188.18	ENSMUST00000042808.13	2887	11	-13	8	-13	-4	multi-exon	FALSE	canonical	1	3	junction_9	2.37697286480094	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATTAATTAATTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	75404352	75417400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414723_75414816_75414964_75416195
ES.5477.54	chr11	+	2914	10	NIC	ENSMUSG00000038188.18	novel	2887	11	NA	NA	9	-19	intron_retention	FALSE	canonical	1	4	junction_1	1.9436506316151	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTCTTTTAGAAAAT	NA	False	NA	NA	False	ATTAAA	-2	NA	75404409	75417385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414964_75416195
ES.5477.55	chr11	+	157	1	Intergenic	novelGene_4298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	75409680	75409837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75409700_75409800
ES.5477.56	chr11	+	2132	3	ISM	ENSMUSG00000038188.18	ENSMUST00000123819.2	2789	10	9542	4	9542	-4	3prime_fragment	FALSE	canonical	2	3	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATTAATTAATTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	75413942	75417400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75414723_75414816_75414964_75416195
ES.5477.6	chr11	+	7446	42	NNC	ENSMUSG00000020850.15	novel	7442	42	NA	NA	-14	-2	intron_retention	FALSE	non_canonical	0	0	junction_34	167.45511265149	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTTTCTTGCTGT	NA	False	NA	16	True	AATAAA	-13	NA	75377627	75400271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395410_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5477.7	chr11	+	2071	1	Genic_Genomic	ENSMUSG00000020850.15	novel	NA	NA	NA	NA	-13	-5062	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAATAACAACAACTTCT	NA	False	NA	NA	False	NA	NA	NA	75377628	75379699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_75377600_75379700
ES.5477.9	chr11	+	7256	43	FSM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	-9	2	-5	0	multi-exon	FALSE	canonical	2	7	junction_1	167.072261580339	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377636	75400273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ES.5478.1	chr11	-	182	1	Intergenic	novelGene_4294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTAAAAAAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	75366918	75366736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75366700_75366900
ES.5479.1	chr11	-	179	1	Intergenic	novelGene_4296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	75369750	75369571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75369600_75369800
ES.548.1	chr1	-	191	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	59298509	59298318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59298300_59298500
ES.5480.1	chr11	-	3989	2	Antisense	novelGene_ENSMUSG00000020850.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-12	NA	75384308	75380220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75381368_75381466
ES.5481.1	chr11	+	151	1	Intergenic	novelGene_4299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATATAATAAATAAATTAA	2789	False	NA	NA	False	NA	NA	NA	75418437	75418588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75418400_75418600
ES.5482.1	chr11	+	171	1	Intergenic	novelGene_4300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAACAAA	3501	False	NA	NA	False	NA	NA	NA	75419149	75419320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75419100_75419300
ES.5483.1	chr11	+	3642	14	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-1094	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	13.9428249240929	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	5777	False	NA	29	True	AATAAA	-32	NA	75421425	75464617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75421930_75423413_75423615_75433983_75434192_75435507_75435564_75436504_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.10	chr11	+	6901	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	22	-3687	22	0	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTCCTCTGTGGCTTC	6897	False	NA	NA	False	NA	NA	NA	75422545	75468396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.11	chr11	+	3753	5	FSM	ENSMUSG00000038178.17	ENSMUST00000143035.8	1161	5	370	-2962	1	2909	multi-exon	FALSE	canonical	3	23	junction_1	3.19178633370093	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTTGCTGGTCCTCTT	7290	False	NA	NA	False	ATTAAA	-19	NA	75422938	75439565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579
ES.5483.12	chr11	+	3477	13	ISM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	476	92	36	-92	3prime_fragment	FALSE	canonical	3	25	junction_5	6.71389520985314	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	7351	False	NA	29	True	AATAAA	-32	NA	75422999	75464617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.13	chr11	+	6879	14	NIC	ENSMUSG00000038178.17	novel	7145	14	NA	NA	36	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.0314236475764	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCCTCTGTGGCTTCCA	7351	False	NA	NA	False	NA	NA	NA	75422999	75468398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75423035_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.14	chr11	+	3025	13	NNC	ENSMUSG00000038178.17	novel	7145	14	NA	NA	118	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.4789118682617	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGTATCAGCTAATT	7433	False	NA	27	True	AATAAA	-30	NA	75423081	75464615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75423254_75423413_75423615_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.15	chr11	+	6899	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	250	-4	224	-1	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCTGTGGCTTCCATG	7539	False	NA	NA	False	NA	NA	NA	75423187	75468400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.16	chr11	+	2776	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3777	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.2581212009009	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTGTATGTGCCTATT	9499	False	NA	43	True	NA	NA	NA	75447869	75464631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75448111_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.17	chr11	+	6458	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3416	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCCTCTGTGGCTTCCA	9860	False	NA	NA	False	NA	NA	NA	75448230	75468398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.18	chr11	+	2611	10	NNC	ENSMUSG00000038178.17	novel	744	5	NA	NA	-3366	-108	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.7143352554372	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGATGCCCCTCCTCA	9910	False	NA	13	True	AATAAA	-16	NA	75448280	75464601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75448387_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.2	chr11	+	3273	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	-123	86	-119	-86	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTAATTACTGTATG	6752	False	NA	35	True	AATAAA	-38	NA	75422400	75464623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.3	chr11	+	3239	14	NIC	ENSMUSG00000038178.17	novel	3236	14	NA	NA	-47	-92	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	10.1858470089601	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGTATCAGCTAATTAC	6824	False	NA	29	True	AATAAA	-32	NA	75422472	75464617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75422649_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.4	chr11	+	3112	14	NNC	ENSMUSG00000038178.17	novel	3236	14	NA	NA	-24	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.95851842734	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGCCCCTCCTCACG	6847	False	NA	15	True	AATAAA	-18	NA	75422495	75464603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75422557_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461473_75462582_75462707_75463140
ES.5483.6	chr11	+	3088	14	FSM	ENSMUSG00000038178.17	ENSMUST00000042561.14	6891	14	17	3786	17	-94	multi-exon	FALSE	canonical	3	5	junction_1	10.1858470089601	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACGTATCAGCTAATT	6892	False	NA	27	True	AATAAA	-30	NA	75422540	75464615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75422568_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.7	chr11	+	3071	14	NNC	ENSMUSG00000038178.17	novel	6891	14	NA	NA	18	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13.3252440944815	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATGCCCCTCCTCACG	6893	False	NA	15	True	AATAAA	-18	NA	75422541	75464603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75422568_75423413_75423627_75433999_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.8	chr11	+	3766	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	-395	3774	19	-87	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGCTAATTACTGTAT	6894	False	NA	34	True	AATAAA	-37	NA	75422542	75464622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5483.9	chr11	+	6936	14	NNC	ENSMUSG00000038178.17	novel	6891	14	NA	NA	19	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	11.2486685602652	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGCTTCCATGTC	6894	False	NA	NA	False	NA	NA	NA	75422542	75468402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75422631_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ES.5484.1	chr11	-	1242	1	FSM	ENSMUSG00000109715.2	ENSMUST00000209836.2	2795	1	1555	-2	1555	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTGTGTCTGTGTGTG	9021	False	NA	NA	False	AATAAA	-22	NA	75422342	75421100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75421100_75422300
ES.5485.1	chr11	-	175	1	Intergenic	novelGene_4301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATTTTATTTGTCT	27	False	NA	NA	False	NA	NA	NA	75470748	75470573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75470600_75470700
ES.5486.1	chr11	+	182	1	Intergenic	novelGene_4302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTTTTGTT	4986	False	NA	NA	False	NA	NA	NA	75473185	75473367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75473200_75473400
ES.5487.1	chr11	+	1541	1	Intergenic	novelGene_4303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTACCTTTGGTCATGG	7889	False	NA	NA	False	NA	NA	NA	75476088	75477629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75476100_75477600
ES.5488.1	chr11	+	3615	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-30	-146	intron_retention	FALSE	canonical	0	0	junction_4	204.812109017021	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTCTAGCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	75478892	75519458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.12	chr11	+	1686	11	NNC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_4	270.618273588463	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATCTCTGGTTAATAT	NA	False	NA	11	True	AATAAA	-18	NA	75478925	75517556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510150_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.13	chr11	+	1667	10	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	278.595330227718	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCATCTCTGGTTAAT	NA	False	NA	9	True	AATAAA	-16	NA	75478926	75517554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479183_75488988_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.14	chr11	+	1376	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_4	204.812109017021	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCTGCCTTTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	75478929	75517256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.15	chr11	+	3584	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-4	-146	intron_retention	FALSE	non_canonical	0	0	junction_4	204.812109017021	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTCTAGCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	75478929	75519458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499924_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.16	chr11	+	5734	4	NNC	ENSMUSG00000017781.18	novel	1245	10	NA	NA	-5	5647	intron_retention	FALSE	canonical	1	60	junction_3	298.331284909169	255	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGACTTTGCCTCCAT	NA	False	NA	NA	False	TTTAAA	-28	NA	75478939	75495021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75494307_75494858
ES.5488.17	chr11	+	1174	10	NNC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	14	-18	intron_retention	FALSE	canonical	0	0	junction_3	277.158197906298	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGTGTGCGGGAG	NA	False	NA	4	True	AATAGA	-15	NA	75478958	75517114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.18	chr11	+	610	5	NNC	ENSMUSG00000017781.18	novel	1245	10	NA	NA	-19	8019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	305.441483757528	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	75478965	75497393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75497268
ES.5488.2	chr11	+	1297	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-26	12	intron_retention	FALSE	canonical	0	0	junction_4	204.812109017021	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATACATGGTGTAGCTG	NA	False	NA	34	True	TATAAA	-28	NA	75478896	75517144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.20	chr11	+	987	9	NNC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	10019	13	intron_retention	FALSE	canonical	0	0	junction_2	223.14649756382	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACATGGTGTAGCTGC	1862	False	NA	35	True	TATAAA	-29	NA	75489003	75517145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.21	chr11	+	4030	7	ISM	ENSMUSG00000017781.18	ENSMUST00000179521.8	3727	12	20022	144	-12541	-144	3prime_fragment	FALSE	canonical	3	596	junction_2	36.044725303742	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTCTAGCTTATTG	8491	False	NA	7	True	AATAAA	-16	NA	75498955	75519460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.3	chr11	+	1709	11	NNC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_4	204.812109017021	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATCTCTGGTTAATAT	NA	False	NA	11	True	AATAAA	-18	NA	75478896	75517556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.4	chr11	+	8667	10	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-22	-146	intron_retention	FALSE	canonical	0	0	junction_3	211.448852642786	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGAGTCTAGCTTAT	NA	False	NA	5	True	AATAAA	-14	NA	75478900	75519458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.5	chr11	+	3775	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-22	-4	intron_retention	FALSE	canonical	0	0	junction_4	204.812109017021	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTACAGTATGGATTC	NA	False	NA	NA	False	AATAAA	-20	NA	75478900	75519626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.6	chr11	+	3761	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-9	-11	intron_retention	FALSE	non_canonical	0	0	junction_4	204.812109017021	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAGTCACTTACAGTA	NA	False	NA	NA	False	AATAAA	-13	NA	75478913	75519619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494311_75499924_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.7	chr11	+	1565	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-2	-5	intron_retention	FALSE	canonical	0	0	junction_1	271.389922436335	276	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCATTGCATCTCTGGTT	NA	False	NA	6	True	AATAAA	-13	NA	75478920	75517551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479064_75483014_75483046_75489005_75489155_75494214_75494311_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.8	chr11	+	1685	11	NNC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	204.812109017021	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTGCATCTCTGGTTA	NA	False	NA	7	True	AATAAA	-14	NA	75478921	75517552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499921_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5488.9	chr11	+	2671	11	NIC	ENSMUSG00000017781.18	novel	3761	12	NA	NA	2	-4	intron_retention	FALSE	canonical	1	54	junction_4	188.939249495704	276	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTGCATCTCTGGTTA	NA	False	NA	7	True	AATAAA	-14	NA	75478924	75517552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75498932_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ES.5489.1	chr11	-	403	1	FSM	ENSMUSG00000081485.6	ENSMUST00000122170.2	192	1	-94	-117	-94	117	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATTCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	75490874	75490471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75490500_75490900
ES.549.1	chr1	+	177	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGAAGAATCCA	3579	False	NA	NA	False	NA	NA	NA	59302508	59302685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59302500_59302700
ES.5490.1	chr11	-	167	1	Intergenic	novelGene_4304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75506040	75505873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75505900_75506000
ES.5491.1	chr11	-	157	1	Intergenic	novelGene_4305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	75509399	75509242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75509200_75509400
ES.5492.1	chr11	-	1892	4	Antisense	novelGene_ENSMUSG00000017781.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.84573486395988	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATATTTATTCTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	75521603	75515690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75516409_75518486_75518577_75519066_75519860_75521312
ES.5492.2	chr11	-	1469	4	Antisense	novelGene_ENSMUSG00000017781.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.84573486395988	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTATCTCAGGTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	75521618	75516124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75516409_75518486_75518577_75519066_75519856_75521312
ES.5492.3	chr11	-	2911	3	Antisense	novelGene_ENSMUSG00000017781.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	6	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTATAATCTATCT	NA	False	NA	NA	False	AATAAA	-15	NA	75521612	75516133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75516409_75518486_75518577_75519066
ES.5492.4	chr11	-	667	3	Antisense	novelGene_ENSMUSG00000017781.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCATTTATAATCTATCT	NA	False	NA	NA	False	AATAAA	-15	NA	75521614	75516133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75516409_75518486_75518577_75521312
ES.5493.1	chr11	+	2823	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	-145	1	-145	-1	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTGACTCCTTTGATGG	5294	False	NA	26	True	TATAAA	-17	NA	75521668	75539696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.10	chr11	+	2404	11	NNC	ENSMUSG00000006127.10	novel	3381	11	NA	NA	11	56	intron_retention	FALSE	canonical	1	1	junction_4	45.8197555646034	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGTGATTGAAACAGAGT	5517	False	NA	30	True	AATACA	-15	NA	75521891	75538746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528040_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.100	chr11	+	3490	3	NNC	ENSMUSG00000017776.16	novel	4290	3	NA	NA	-13	32	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	232.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTTGAAATATTTTTC	2137	False	NA	42	True	NA	NA	NA	75570123	75596923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75570491_75583022_75583389_75594166
ES.5493.101	chr11	+	3689	4	NNC	ENSMUSG00000017776.16	novel	3642	3	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.138526048977	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGCTTGGTGATC	2138	False	NA	12	True	NA	NA	NA	75570124	75596893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75570491_75581994_75582080_75583022_75583559_75594191
ES.5493.102	chr11	+	1105	2	ISM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	-12	7854	-12	-7802	5prime_fragment	FALSE	canonical	3	466	junction_1	0	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTGAATGTTCTGATT	2138	False	NA	NA	False	AGTAAA	-11	NA	75570124	75583761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75570491_75583022
ES.5493.104	chr11	+	4439	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	43	-840	-9	-3	multi-exon	FALSE	canonical	3	225	junction_2	120.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTACTATGTTGAATGT	2141	False	NA	NA	False	AATAAA	-14	NA	75570127	75597731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583559_75594191
ES.5493.105	chr11	+	4080	2	ISM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	-9	4876	-9	-4824	5prime_fragment	FALSE	canonical	3	466	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATAACTGTCAGAACT	2141	False	NA	NA	False	NA	NA	NA	75570127	75586739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75570491_75583022
ES.5493.106	chr11	+	3464	4	NNC	ENSMUSG00000017776.16	novel	4290	3	NA	NA	-8	49696	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	190.253047865789	3714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAATAAAAAAAAAGCA	2142	False	NA	NA	False	NA	NA	NA	75570128	75647430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75570491_75583022_75583389_75594191_75596898_75647400
ES.5493.107	chr11	+	8113	2	NNC	ENSMUSG00000017776.16	novel	671	2	NA	NA	-6	-13246	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACCTGTCTCAAAAT	2144	False	NA	NA	False	NA	NA	NA	75570130	75578317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75575343_75575416
ES.5493.109	chr11	+	3637	3	NNC	ENSMUSG00000017776.16	novel	3642	3	NA	NA	-5	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTAATCTTGAAATAT	2145	False	NA	37	True	NA	NA	NA	75570131	75596918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75570506_75583022_75583559_75594191
ES.5493.11	chr11	+	2825	9	NNC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-2517	1	intron_retention	FALSE	canonical	1	3	junction_1	42.8031467885248	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	NA	False	NA	20	True	TATAAA	-11	NA	75527445	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75528143_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.110	chr11	+	3651	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	34	605	7	238	multi-exon	FALSE	canonical	3	229	junction_2	118.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCCTGGAAATGGGT	2157	False	NA	NA	False	TATAAA	-28	NA	75570143	75597129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583389_75594191
ES.5493.111	chr11	+	3976	1	Intergenic	novelGene_4309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACCTGTCTCAAAAT	1523	False	NA	NA	False	NA	NA	NA	75574341	75578317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75574300_75578300
ES.5493.112	chr11	+	208	1	Intergenic	novelGene_4311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAATGGGCATCGGAT	5314	False	NA	NA	False	NA	NA	NA	75582446	75582654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75582400_75582700
ES.5493.113	chr11	+	3149	3	NNC	ENSMUSG00000017776.16	novel	3642	3	NA	NA	12653	27	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	110	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTAATCTTGAAATAT	5888	False	NA	37	True	NA	NA	NA	75583020	75596918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75583559_75594191_75594501_75594616
ES.5493.114	chr11	+	3123	1	NIC	ENSMUSG00000017776.16	novel	965	3	NA	NA	18125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTTAAAAAAA	327	False	NA	NA	False	NA	NA	NA	75588492	75591615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75588500_75591600
ES.5493.115	chr11	+	3985	1	NIC	ENSMUSG00000017776.16	novel	4290	3	NA	NA	22571	32	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTTGAAATATTTTTC	4773	False	NA	42	True	NA	NA	NA	75592938	75596923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75592900_75596900
ES.5493.116	chr11	+	3745	1	Genic_Genomic	ENSMUSG00000017776.16	novel	NA	NA	NA	NA	25136	1514	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTACACTCTGTCATGTG	588	False	NA	NA	False	NA	NA	NA	75595503	75599248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_75595500_75599200
ES.5493.117	chr11	+	2009	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	-112	203	-112	-203	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTGTCTGAATGTGAA	2879	False	NA	27	True	AATAAA	-28	NA	75623582	75656468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.118	chr11	+	2108	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	-3	-5	-3	5	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGGATCATTTTCTAA	2988	False	NA	31	True	ATTAAA	-27	NA	75623691	75656676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.119	chr11	+	1765	6	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	8	-299	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4203.75149598546	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	2999	False	NA	-16	True	NA	NA	NA	75623702	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75646479_75647642_75647850_75650117_75650255_75655445
ES.5493.12	chr11	+	4111	4	NNC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-2647	0	intron_retention	TRUE	non_canonical	0	0	junction_1	65.5709962983296	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGACTCCTTTGATGGG	1472	False	NA	27	True	TATAAA	-18	NA	75534964	75539697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75537065_75537272_75537750_75538018_75538333_75538477
ES.5493.120	chr11	+	1785	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	10	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4054.90411230648	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3001	False	NA	-16	True	NA	NA	NA	75623704	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642712_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.121	chr11	+	1608	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	15	-270	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4641.68485035337	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCATGCCTCCATC	3006	False	NA	13	True	NA	NA	NA	75623709	75656401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75646507_75650117_75650255_75655445
ES.5493.122	chr11	+	1621	5	FSM	ENSMUSG00000020849.14	ENSMUST00000134745.8	599	5	-17	-1005	-17	-217	multi-exon	FALSE	canonical	0	0	junction_3	4641.68485035337	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTGACAGTATTGTT	3018	False	NA	13	True	AATAAA	-14	NA	75623721	75656454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646479_75650117_75650255_75655445
ES.5493.124	chr11	+	1318	5	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	3	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4732.78147604556	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3038	False	NA	-16	True	NA	NA	NA	75623741	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647679_75655573
ES.5493.125	chr11	+	3171	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-17	combination_of_known_junctions	FALSE	canonical	3	8977	junction_4	1024.31644890629	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCATTTAACACAGGT	3039	False	NA	9	True	ATTAAA	-5	NA	75623742	75656654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75647850_75650117_75650255_75655445
ES.5493.126	chr11	+	1553	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-299	combination_of_known_splicesites	FALSE	canonical	3	611	junction_1	3883.94258453958	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3039	False	NA	-16	True	NA	NA	NA	75623742	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.128	chr11	+	1783	7	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3901.83149302991	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACACAGGTGTAACTA	3039	False	NA	16	True	ATTAAA	-12	NA	75623742	75656661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445_75655999_75656257
ES.5493.129	chr11	+	2090	7	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5005.23310867958	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACAGGTGTAACTATGG	3039	False	NA	19	True	ATTAAA	-15	NA	75623742	75656664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75653523_75653569_75655445
ES.5493.13	chr11	+	181	2	Intergenic	novelGene_4306	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTTCAAAACT	3578	False	NA	NA	False	NA	NA	NA	75537070	75540944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75537210_75540902
ES.5493.131	chr11	+	1857	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	5	combination_of_known_splicesites	FALSE	canonical	3	611	junction_1	3883.94258453958	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGGATCATTTTCTAA	3039	False	NA	31	True	ATTAAA	-27	NA	75623742	75656676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.132	chr11	+	2017	6	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4203.75149598546	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACAGGTGTAACTATGG	3039	False	NA	19	True	ATTAAA	-15	NA	75623742	75656664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75646479_75647642_75647850_75650117_75650255_75655445
ES.5493.134	chr11	+	1946	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4054.90411230648	3330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	3040	False	NA	20	True	ATTAAA	-16	NA	75623743	75656665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642805_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.135	chr11	+	1393	4	NNC	ENSMUSG00000020849.14	novel	599	5	NA	NA	5	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4866.30978143489	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3040	False	NA	-16	True	NA	NA	NA	75623743	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642862_75650117_75650255_75655445
ES.5493.136	chr11	+	1676	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	5	-272	at_least_one_novel_splicesite	FALSE	canonical	2	200	junction_1	3976.3188202155	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATATATCATGCCTCCA	3040	False	NA	11	True	NA	NA	NA	75623743	75656399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642809_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.139	chr11	+	1774	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	9	-279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4245.84773160791	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCCAAATATATCAT	3044	False	NA	4	True	NA	NA	NA	75623747	75656392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650111_75650255_75655445
ES.5493.14	chr11	+	181	1	Intergenic	novelGene_4307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTTCAAAACTA	7272	False	NA	NA	False	NA	NA	NA	75540764	75540945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75540800_75540900
ES.5493.142	chr11	+	4095	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	12	-217	intron_retention	FALSE	canonical	3	8977	junction_4	949.204239086615	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTGACAGTATTGTT	3047	False	NA	13	True	AATAAA	-14	NA	75623750	75656454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75650255_75655445
ES.5493.143	chr11	+	1189	3	NNC	ENSMUSG00000020849.14	novel	738	4	NA	NA	17	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5640	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3052	False	NA	-16	True	NA	NA	NA	75623755	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642813_75655451
ES.5493.146	chr11	+	4202	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	76	-2178	-16	2178	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATGTGCCCTGGTGTT	3067	False	NA	NA	False	AATAAA	-15	NA	75623770	75658849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.147	chr11	+	1712	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	77	311	-15	-311	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATTAAACTTAAATAAAA	3068	False	NA	-28	True	NA	NA	NA	75623771	75656360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.148	chr11	+	1456	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	77	567	-15	-567	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	3319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCCGTGGCTGCTCAT	3068	False	NA	10	True	NA	NA	NA	75623771	75656104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.149	chr11	+	4287	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	-15	-4	intron_retention	FALSE	canonical	3	8977	junction_4	949.204239086615	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGTGTAACTATGGATC	3068	False	NA	22	True	ATTAAA	-18	NA	75623771	75656667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75650255_75655445
ES.5493.15	chr11	+	180	2	Intergenic	novelGene_4308	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7272	False	NA	NA	False	NA	NA	NA	75540764	75582628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75540776_75582459
ES.5493.150	chr11	+	1772	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	-14	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4054.90411230648	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCAAATATATCATGCCT	3069	False	NA	8	True	NA	NA	NA	75623772	75656396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642681_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.152	chr11	+	1599	7	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	-12	-299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3901.83149302991	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3071	False	NA	-16	True	NA	NA	NA	75623774	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445_75655541_75655662
ES.5493.153	chr11	+	2884	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	-11	-271	combination_of_known_junctions	FALSE	canonical	3	8977	junction_4	1024.31644890629	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATATCATGCCTCCAT	3072	False	NA	12	True	NA	NA	NA	75623775	75656400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75642907_75646399_75647850_75650117_75650255_75655445
ES.5493.154	chr11	+	1714	6	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	-11	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4268.40042170366	3329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3072	False	NA	-16	True	NA	NA	NA	75623775	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650249_75655445
ES.5493.155	chr11	+	5226	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-271	intron_retention	FALSE	canonical	3	8977	junction_4	853.934240735199	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATATCATGCCTCCAT	3087	False	NA	12	True	NA	NA	NA	75623790	75656400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75623918_75642706_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.156	chr11	+	1546	5	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	4	-270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4641.68485035337	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCATGCCTCCATC	3087	False	NA	13	True	NA	NA	NA	75623790	75656401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75650098_75650255_75655445
ES.5493.157	chr11	+	1808	5	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4641.68485035337	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	3089	False	NA	20	True	ATTAAA	-16	NA	75623792	75656665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75623918_75642706_75642907_75646399_75646507_75650098_75650255_75655445
ES.5493.158	chr11	+	1709	6	NIC	ENSMUSG00000020849.14	novel	815	4	NA	NA	-4	-270	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	4049.00829339729	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATCATGCCTCCATC	3266	False	NA	13	True	NA	NA	NA	75623969	75656401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75624072_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.159	chr11	+	1973	6	NIC	ENSMUSG00000020849.14	novel	815	4	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	4049.00829339729	3328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	3266	False	NA	20	True	ATTAAA	-16	NA	75623969	75656665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75624072_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.16	chr11	+	5413	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	-17	-744	-17	744	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCAGTTCTAGACTTCA	7820	False	NA	NA	False	NA	NA	NA	75541312	75565480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.160	chr11	+	1668	6	NNC	ENSMUSG00000020849.14	novel	815	4	NA	NA	253	-299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4054.90411230648	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3523	False	NA	-16	True	NA	NA	NA	75624226	75656372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75624317_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.161	chr11	+	1688	6	NNC	ENSMUSG00000020849.14	novel	815	4	NA	NA	450	-282	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	4050.18743269987	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAATGCCAAATATAT	3720	False	NA	1	True	NA	NA	NA	75624423	75656389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75624517_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.162	chr11	+	6575	1	Intergenic	novelGene_4314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3052	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAATAA	2338	False	NA	NA	False	NA	NA	NA	75628648	75635223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75628600_75635200
ES.5493.163	chr11	+	8545	6	NNC	ENSMUSG00000020849.14	novel	815	4	NA	NA	-6866	-265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4054.90411230648	3318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGCCTCCATCCTTTA	4470	False	NA	18	True	NA	NA	NA	75635563	75656406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75636520_75636729_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.164	chr11	+	1872	5	ISM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	19011	6	276	-6	3prime_fragment	FALSE	canonical	3	8977	junction_4	840.54312798333	3283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	132	False	NA	20	True	ATTAAA	-16	NA	75642705	75656665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ES.5493.165	chr11	+	1477	4	ISM	ENSMUSG00000020849.14	ENSMUST00000134745.8	599	5	19127	-1216	436	-6	3prime_fragment	FALSE	canonical	0	0	junction_2	4855.47088916776	3283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAGGTGTAACTATGGA	292	False	NA	20	True	ATTAAA	-16	NA	75642865	75656665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75642907_75646399_75646479_75650117_75650255_75655445
ES.5493.166	chr11	+	3909	2	ISM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	26051	-2174	7316	2174	3prime_fragment	FALSE	canonical	3	8977	junction_1	0	3280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTATGTGCCCTGG	7172	False	NA	NA	False	AATAAA	-11	NA	75649745	75658845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75650255_75655445
ES.5493.167	chr11	+	1010	1	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	13015	-217	mono-exon	FALSE	NA	NA	NA	NA	NA	3278	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTGACAGTATTGTT	3223	False	NA	13	True	AATAAA	-14	NA	75655444	75656454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75655400_75656500
ES.5493.17	chr11	+	4669	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	-13	-4	-13	4	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCCTGTGAGTGTGGAA	7824	False	NA	19	True	AATAAA	-23	NA	75541316	75564740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.18	chr11	+	4674	32	NNC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	76.610383659758	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	7832	False	NA	13	True	AATAAA	-17	NA	75541324	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560753_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.19	chr11	+	5388	32	NNC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	4	722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	76.6588588824624	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAATGT	7841	False	NA	NA	False	NA	NA	NA	75541333	75565458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551240_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.2	chr11	+	3375	11	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-144	1	intron_retention	FALSE	canonical	3	99	junction_5	23.4682764599363	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	5295	False	NA	20	True	TATAAA	-11	NA	75521669	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.20	chr11	+	4094	28	NIC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.5761427418015	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	7841	False	NA	13	True	AATAAA	-17	NA	75541333	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75541591_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.22	chr11	+	5311	30	NIC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	21	-3	intron_retention	FALSE	canonical	3	31	junction_1	57.2395720528993	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACACAGTCTTCCTGTG	7858	False	NA	10	True	AATAAA	-14	NA	75541350	75564731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.23	chr11	+	4818	28	NIC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	21	739	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63.5761427418015	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGGATCAGTTCTAGA	7858	False	NA	NA	False	NA	NA	NA	75541350	75565475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75541591_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.24	chr11	+	4713	33	NNC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.8919108258255	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7864	False	NA	15	True	AATAAA	-19	NA	75541356	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75541591_75547893_75547982_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.25	chr11	+	4707	31	NIC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	27	0	intron_retention	FALSE	canonical	3	31	junction_1	55.9908821942367	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7864	False	NA	15	True	AATAAA	-19	NA	75541356	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562882_75562977_75563078_75563435
ES.5493.26	chr11	+	2543	1	NIC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	33	-4569	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTGTCAGACCAAAGA	7870	False	NA	NA	False	NA	NA	NA	75541362	75543905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75541400_75543900
ES.5493.27	chr11	+	3988	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	72	592	72	-590	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTCTGAGGGCATCCC	7909	False	NA	NA	False	NA	NA	NA	75541401	75564144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.28	chr11	+	4466	32	NNC	ENSMUSG00000017774.20	novel	4652	32	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	76.5235404124303	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7924	False	NA	15	True	AATAAA	-19	NA	75541416	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75551095_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.29	chr11	+	4582	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	-32	-3	-32	3	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCTGTGAGTGTGGA	8811	False	NA	18	True	AATAAA	-22	NA	75542303	75564739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.3	chr11	+	1829	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	-21	871	-21	136	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGCATGCCATTTCTT	5418	False	NA	110	True	NA	NA	NA	75521792	75538826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.30	chr11	+	3966	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	-14	595	-14	-593	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCAGTCTGAGGGCAT	8829	False	NA	NA	False	NA	NA	NA	75542321	75564141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.31	chr11	+	5287	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	-1	-739	-1	739	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGGATCAGTTCTAGA	8842	False	NA	NA	False	NA	NA	NA	75542334	75565475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.32	chr11	+	4637	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	2	-3	intron_retention	FALSE	canonical	3	188	junction_1	34.0640573038503	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACACAGTCTTCCTGTG	8845	False	NA	10	True	AATAAA	-14	NA	75542337	75564731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.34	chr11	+	4897	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	15	0	intron_retention	FALSE	canonical	3	188	junction_1	34.0277827664395	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	8858	False	NA	13	True	AATAAA	-17	NA	75542350	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.35	chr11	+	4620	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	15	0	intron_retention	FALSE	canonical	3	188	junction_1	33.4752976918138	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8858	False	NA	15	True	AATAAA	-19	NA	75542350	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.36	chr11	+	4614	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	15	0	intron_retention	FALSE	canonical	3	188	junction_1	34.0277827664395	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8858	False	NA	15	True	AATAAA	-19	NA	75542350	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.38	chr11	+	2603	21	ISM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	15	4311	15	12	5prime_fragment	FALSE	canonical	3	188	junction_1	35.7302043095194	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGTCATCCCAGTTGC	8858	False	NA	NA	False	NA	NA	NA	75542350	75560425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023
ES.5493.4	chr11	+	3444	11	FSM	ENSMUSG00000006127.10	ENSMUST00000136605.8	3381	11	-62	-1	-21	1	multi-exon	FALSE	canonical	0	0	junction_4	46.0786284518105	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	5418	False	NA	20	True	TATAAA	-11	NA	75521792	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528043_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.40	chr11	+	4622	31	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_28	64.1989009944009	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	8859	False	NA	13	True	AATAAA	-17	NA	75542351	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562787_75562882_75562977_75563078_75563435
ES.5493.41	chr11	+	4557	33	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.8919108258255	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8859	False	NA	15	True	AATAAA	-19	NA	75542351	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75547955_75547982_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.42	chr11	+	4613	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	0	intron_retention	FALSE	canonical	3	188	junction_1	33.7367093172342	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8859	False	NA	15	True	AATAAA	-19	NA	75542351	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.43	chr11	+	4645	33	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.8246981803056	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCTGTGAGTGTGGA	8859	False	NA	18	True	AATAAA	-22	NA	75542351	75564739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551455_75551567_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.44	chr11	+	4306	30	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	64.5092514265938	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8859	False	NA	15	True	AATAAA	-19	NA	75542351	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561435_75562469_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.45	chr11	+	4524	32	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	63.3687817256932	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	8860	False	NA	12	True	AATAAA	-16	NA	75542352	75564733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561121_75561375_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.46	chr11	+	3866	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	17	-593	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	64.4087985707957	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCAGTCTGAGGGCAT	8860	False	NA	NA	False	NA	NA	NA	75542352	75564141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.47	chr11	+	4853	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	18	0	intron_retention	FALSE	canonical	3	188	junction_1	33.4381850916317	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	8861	False	NA	13	True	AATAAA	-17	NA	75542353	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.49	chr11	+	4733	31	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	23	4	intron_retention	FALSE	canonical	3	188	junction_1	34.0831662587592	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCCTGTGAGTGTGGAA	8866	False	NA	19	True	AATAAA	-23	NA	75542358	75564740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.5	chr11	+	3006	11	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	14	0	intron_retention	FALSE	canonical	3	99	junction_5	23.365786954434	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTCGTGTGACTCCT	5453	False	NA	19	True	TATAAA	-10	NA	75521827	75539689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.50	chr11	+	4511	32	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.1579458075263	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACAGTCTTCCTGTGA	8867	False	NA	11	True	AATAAA	-15	NA	75542359	75564732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549185_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.51	chr11	+	5038	30	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	24	739	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	64.5092514265938	517	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGGATCAGTTCTAGA	8867	False	NA	NA	False	NA	NA	NA	75542359	75565475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561436_75562469_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.54	chr11	+	4490	32	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.3226217277569	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACAGTCTTCCTGTGA	8868	False	NA	11	True	AATAAA	-15	NA	75542360	75564732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549556_75551034_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.57	chr11	+	4485	32	NNC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	49	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.3226217277569	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	8892	False	NA	12	True	AATAAA	-16	NA	75542384	75564733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549552_75551012_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.6	chr11	+	2556	11	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	45.5086804906493	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	5471	False	NA	20	True	TATAAA	-11	NA	75521845	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538227_75538333_75538477
ES.5493.60	chr11	+	4740	32	NNC	ENSMUSG00000017774.20	novel	4659	32	NA	NA	-88	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	80.0946500439372	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	9321	False	NA	12	True	AATAAA	-16	NA	75542813	75564733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75543170_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560960_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.63	chr11	+	5187	31	NIC	ENSMUSG00000017774.20	novel	4659	32	NA	NA	-50	0	intron_retention	FALSE	canonical	0	0	junction_1	61.2523106140132	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	9359	False	NA	13	True	AATAAA	-17	NA	75542851	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75543170_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.64	chr11	+	4862	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	-138	-6	-138	4	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCCTGTGAGTGTGGAA	NA	False	NA	19	True	AATAAA	-23	NA	75546560	75564740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.65	chr11	+	5440	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	19	-741	19	739	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGGATCAGTTCTAGA	NA	False	NA	NA	False	NA	NA	NA	75546717	75565475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.66	chr11	+	5138	31	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	61	1	intron_retention	FALSE	non_canonical	0	0	junction_27	70.3969696317486	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCTTCCTGTGAGTGTG	NA	False	NA	16	True	AATAAA	-20	NA	75546759	75564737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562547_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.67	chr11	+	4071	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	61	586	61	-586	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAGGGCATCCCTAAA	NA	False	NA	NA	False	NA	NA	NA	75546759	75564148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.69	chr11	+	4500	32	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	121	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.3256802921606	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	15	True	AATAAA	-19	NA	75546819	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75551095_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.7	chr11	+	2738	13	NNC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.0415848389	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTCGTGTGACTCCT	5471	False	NA	19	True	TATAAA	-10	NA	75521845	75539689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528043_75528143_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.70	chr11	+	4314	30	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	123	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	70.7053472910848	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTCTTCCTGTGAGTG	NA	False	NA	14	True	AATAAA	-18	NA	75546821	75564735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561378_75562469_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.71	chr11	+	4835	31	NIC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-137	0	intron_retention	FALSE	canonical	3	104	junction_1	45.2062557126285	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546837	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.72	chr11	+	4769	32	NIC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-135	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.0332374120598	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	15	True	AATAAA	-19	NA	75546839	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75547218_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.73	chr11	+	4676	31	NIC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-135	0	intron_retention	FALSE	canonical	3	104	junction_1	45.1862811038926	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	15	True	AATAAA	-19	NA	75546839	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.75	chr11	+	6505	30	NIC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-132	0	intron_retention	FALSE	canonical	3	104	junction_1	45.8179720591685	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546842	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.79	chr11	+	4686	33	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.8919108258255	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546848	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75547863_75547982_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.8	chr11	+	2601	12	FSM	ENSMUSG00000006127.10	ENSMUST00000150857.8	2571	12	-31	1	-5	1	multi-exon	FALSE	canonical	0	0	junction_1	41.3619380270723	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	5475	False	NA	20	True	TATAAA	-11	NA	75521849	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75522024_75523929_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ES.5493.80	chr11	+	4708	32	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.1925802916307	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546852	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548173_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.81	chr11	+	2557	21	FSM	ENSMUSG00000017774.20	ENSMUST00000151174.8	2503	21	-42	-12	-42	12	multi-exon	FALSE	canonical	3	104	junction_1	50.569036969276	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGTCATCCCAGTTGC	NA	False	NA	NA	False	NA	NA	NA	75546932	75560425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023
ES.5493.82	chr11	+	4566	31	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-32	0	intron_retention	FALSE	canonical	0	0	junction_23	69.949855055048	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546942	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561121_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.83	chr11	+	4407	30	NIC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-32	0	intron_retention	FALSE	canonical	1	1	junction_23	71.3579678237698	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546942	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75561368_75561453_75562018_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.85	chr11	+	4476	33	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.8919108258255	490	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACAGTCTTCCTGTGAG	NA	False	NA	12	True	AATAAA	-16	NA	75546965	75564733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75547955_75547982_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.86	chr11	+	4662	32	NNC	ENSMUSG00000017774.20	novel	4718	32	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.448773596128	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	NA	False	NA	15	True	AATAAA	-19	NA	75546965	75564736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551567_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.9	chr11	+	3723	8	NIC	ENSMUSG00000006127.10	novel	2679	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	99	junction_5	27.4404736080982	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTCGTGTGACTCCTT	5486	False	NA	20	True	TATAAA	-11	NA	75521860	75539690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75529083_75530281_75530392_75536253_75536444_75537611
ES.5493.91	chr11	+	3064	20	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6361	0	501	0	3prime_fragment	FALSE	canonical	3	264	junction_17	25.408027610108	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	2916	False	NA	13	True	AATAAA	-17	NA	75553059	75564734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ES.5493.93	chr11	+	3787	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	-87	-58	-87	58	multi-exon	FALSE	canonical	3	225	junction_2	120.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTTGTGTTTTTAA	2011	False	NA	68	True	NA	NA	NA	75569997	75596949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583559_75594191
ES.5493.94	chr11	+	3626	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	-79	95	-79	-95	multi-exon	FALSE	canonical	3	225	junction_2	120.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTTTCTTGACAGTT	2019	False	NA	-85	True	AATAAA	-31	NA	75570005	75596796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583559_75594191
ES.5493.95	chr11	+	3337	3	NNC	ENSMUSG00000017776.16	novel	3642	3	NA	NA	-77	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.5	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTGGCTTGGTGAT	2021	False	NA	11	True	NA	NA	NA	75570007	75596892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75570108_75583022_75583559_75594191
ES.5493.96	chr11	+	3590	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	-99	799	-74	44	multi-exon	FALSE	canonical	3	229	junction_2	118.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTCACAAAAGTGAGT	2024	False	NA	54	True	NA	NA	NA	75570010	75596935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583389_75594191
ES.5493.97	chr11	+	4367	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	-76	-1	-51	1	multi-exon	FALSE	canonical	3	229	junction_2	118.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATGTTGAATGTCGGG	2047	False	NA	NA	False	AATAAA	-18	NA	75570033	75597735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583389_75594191
ES.5493.98	chr11	+	3094	2	FSM	ENSMUSG00000017776.16	ENSMUST00000108426.8	671	2	-11	-2412	-11	2	multi-exon	FALSE	canonical	1	3	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTTGGCTTGGTGATC	2112	False	NA	12	True	NA	NA	NA	75570098	75596893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75594191
ES.5493.99	chr11	+	3352	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	0	938	0	-95	multi-exon	FALSE	canonical	3	229	junction_2	118.5	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCACTTTCTTGACAGTT	2123	False	NA	-85	True	AATAAA	-31	NA	75570109	75596796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_75570491_75583022_75583389_75594191
ES.5494.1	chr11	-	1975	1	Intergenic	novelGene_4310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGAACTCACTCTGTA	NA	False	NA	NA	False	NA	NA	NA	75581493	75579518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75579500_75581500
ES.5495.1	chr11	-	158	1	Intergenic	novelGene_4312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAGAA	6365	False	NA	NA	False	NA	NA	NA	75588433	75588275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75588300_75588400
ES.5496.1	chr11	-	158	1	Intergenic	novelGene_4313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75606444	75606286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75606300_75606400
ES.5496.2	chr11	-	156	2	Antisense	novelGene_ENSMUSG00000020849.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAACAATAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75652569	75606286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75606400_75652526
ES.5496.3	chr11	-	3753	1	Antisense	novelGene_ENSMUSG00000020849.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGAATGGCATTTTGG	6155	False	NA	NA	False	AATAAA	-19	NA	75624647	75620894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75620900_75624600
ES.5496.4	chr11	-	4519	5	Antisense	novelGene_ENSMUSG00000020849.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTATCAGTACTTCAAAGG	NA	False	NA	NA	False	NA	NA	NA	75656830	75640195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_75642906_75646398_75646478_75647641_75647847_75650114_75650253_75655443
ES.5496.5	chr11	-	174	1	Intergenic	novelGene_4315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	75649239	75649065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75649100_75649200
ES.5496.6	chr11	-	174	1	Intergenic	novelGene_4316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75652569	75652395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75652400_75652600
ES.5497.1	chr11	-	1521	9	NNC	ENSMUSG00000020848.8	novel	4361	9	NA	NA	8553	-2549	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGCATTGATGGGCAG	NA	False	NA	NA	False	NA	NA	NA	75678322	75662340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75662895_75663348_75663446_75664364_75664447_75667825_75667984_75670864_75670992_75671080_75671191_75672446_75672522_75676918_75676999_75678084
ES.5498.1	chr11	+	209	1	Intergenic	novelGene_4317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTACTGTTTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	75678577	75678786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75678600_75678800
ES.5499.1	chr11	-	180	1	Intergenic	novelGene_4318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAACTTTTGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75695896	75695716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75695700_75695900
ES.55.1	chr1	+	1103	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	9006520	9007623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9006500_9007600
ES.55.2	chr1	+	456	2	Antisense	novelGene_ENSMUSG00000025909.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACTTTCTTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	9006575	9012001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_9006862_9011831
ES.55.3	chr1	+	5449	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTCCGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	9006576	9012025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9006600_9012000
ES.55.4	chr1	+	3149	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTGCTTTTATGCAT	NA	False	NA	NA	False	NA	NA	NA	9006596	9009745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9006600_9009700
ES.55.5	chr1	+	4942	2	Antisense	novelGene_ENSMUSG00000025909.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTCTTGGCTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	9006596	9012005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_9011365_9011831
ES.55.6	chr1	+	4587	2	Antisense	novelGene_ENSMUSG00000025909.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTCTTGGCTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	9006609	9012005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_9011152_9011960
ES.55.7	chr1	+	4277	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATGGCTGACAATTGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	9010261	9014538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9010300_9014500
ES.550.1	chr1	-	169	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAGAAAGGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59378366	59378197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59378200_59378400
ES.5500.1	chr11	+	142	1	Intergenic	novelGene_4319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTTAATTGTATCA	4691	False	NA	NA	False	AATAAA	-29	NA	75697302	75697444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75697300_75697400
ES.5501.1	chr11	-	210	1	Intergenic	novelGene_4320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACTTGCCAACTAAGAA	NA	False	NA	NA	False	TTTAAA	-7	NA	75702373	75702163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75702200_75702400
ES.5502.1	chr11	-	2145	8	NNC	ENSMUSG00000020847.16	novel	2199	9	NA	NA	-52833	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.32257809350258	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACTGGGCGCAAGAGTC	NA	False	NA	-13	True	AATAAA	-21	NA	75882088	75721827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75723041_75724227_75724375_75725588_75725703_75745129_75745305_75797343_75797474_75799736_75799881_75801775_75801886_75881976
ES.5502.2	chr11	-	2268	10	NNC	ENSMUSG00000020847.16	novel	2199	9	NA	NA	-28750	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.85688683705762	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGACTGGGCGCAAGAG	NA	False	NA	-15	True	AATAAA	-19	NA	75858005	75721829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75723041_75724227_75724375_75724903_75724995_75725588_75725703_75745129_75745305_75797343_75797474_75799736_75799881_75801775_75801886_75802432_75802558_75857984
ES.5502.3	chr11	-	2234	10	NNC	ENSMUSG00000020847.16	novel	2199	9	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.8874998914761	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATAGACTGGGCGCAA	NA	False	NA	-18	True	AATAAA	-16	NA	75828557	75721832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75723041_75724227_75724375_75725588_75725703_75744853_75744904_75745129_75745305_75769774_75769862_75797343_75797474_75799736_75799881_75801775_75801886_75828488
ES.5502.4	chr11	-	1060	4	ISM	ENSMUSG00000020847.16	ENSMUST00000066504.11	988	8	56617	-579	56617	-559	3prime_fragment	FALSE	canonical	3	14	junction_1	2.16024689946929	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGGCTCCCACCCTG	6654	False	NA	NA	False	ATTAAA	-22	NA	75745271	75722383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75723041_75724227_75724375_75725588_75725703_75745129
ES.5502.5	chr11	-	3164	1	Intergenic	novelGene_4321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGTGACTTCTGGGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	75857990	75854826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75854800_75858000
ES.5502.6	chr11	-	149	1	Intergenic	novelGene_4322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75865555	75865406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75865400_75865600
ES.5503.1	chr11	-	226	1	Intergenic	novelGene_4323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCTATTTATCTCGTA	NA	False	NA	NA	False	NA	NA	NA	75887455	75887229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75887200_75887500
ES.5504.1	chr11	+	197	1	Intergenic	novelGene_4324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	75888395	75888592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75888400_75888600
ES.5505.1	chr11	+	869	2	NNC	ENSMUSG00000053783.6	novel	921	2	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCTGAAGGAAGCCGAT	NA	False	NA	NA	False	AATAAA	-14	NA	75890782	75894391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_75891093_75893832
ES.5506.1	chr11	-	3526	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	-14	0	-14	0	multi-exon	FALSE	canonical	3	32	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGAATGCGTTTGTTT	7873	False	NA	NA	False	AATAAA	-17	NA	75918622	75910019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75913067_75915773_75915884_75918253
ES.5506.2	chr11	-	1843	3	NNC	ENSMUSG00000020846.7	novel	3512	3	NA	NA	42	-1620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGACTCTGATAGTGT	7929	False	NA	NA	False	ATTAAA	-13	NA	75918566	75911639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75913067_75915773_75915877_75918253
ES.5506.3	chr11	-	1857	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	35	1620	35	-1620	multi-exon	FALSE	canonical	3	32	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGACTCTGATAGTGT	7922	False	NA	NA	False	ATTAAA	-13	NA	75918573	75911639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75913067_75915773_75915884_75918253
ES.5506.4	chr11	-	1472	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	19	2021	19	-2021	multi-exon	FALSE	canonical	3	32	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACTCTGTGCCTTCCGC	7906	False	NA	NA	False	TTTAAA	-1	NA	75918589	75912040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75913067_75915773_75915884_75918253
ES.5506.5	chr11	-	1003	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	-24	2533	-24	-2533	multi-exon	FALSE	canonical	3	32	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAGAGAAACTCGGCT	7863	False	NA	NA	False	TTTAAA	-25	NA	75918632	75912552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75913067_75915773_75915884_75918253
ES.5507.1	chr11	+	2743	1	Intergenic	novelGene_4326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACTGGGAAAAAATCGAG	NA	False	NA	NA	False	NA	NA	NA	75957796	75960539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_75957800_75960500
ES.5508.1	chr11	+	179	1	Intergenic	novelGene_4327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATTTA	6862	False	NA	NA	False	NA	NA	NA	76018996	76019175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76019000_76019200
ES.5509.1	chr11	+	194	1	Intergenic	novelGene_4328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	76036610	76036804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76036600_76036800
ES.551.1	chr1	+	4864	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-327	-5	-327	5	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTATTTACTCTTC	5027	False	NA	NA	False	AATAAA	-20	NA	59521255	59526119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59521300_59526100
ES.551.2	chr1	+	4595	2	Genic_Genomic	ENSMUSG00000041075.9	novel	4532	1	NA	NA	-326	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAGTGAATGTTTATT	5028	False	NA	NA	False	AATAAA	-12	NA	59521256	59526111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_59521829_59522088
ES.551.3	chr1	+	7600	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-324	-2744	-324	2744	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACACAAAAAAA	5030	False	NA	NA	False	ATTAAA	-9	NA	59521258	59528858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59521300_59528900
ES.551.4	chr1	+	4753	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	-322	101	-322	-101	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTACTTTGGATTTT	5032	False	NA	NA	False	AATATA	-13	NA	59521260	59526013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59521300_59526000
ES.5510.1	chr11	+	162	1	Intergenic	novelGene_4329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76040660	76040822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76040700_76040800
ES.5511.1	chr11	+	192	1	Intergenic	novelGene_4330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	76052749	76052941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76052700_76052900
ES.5512.1	chr11	+	159	1	Intergenic	novelGene_4332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	76068608	76068767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76068600_76068800
ES.5513.1	chr11	-	2762	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	1	70	1	0	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTATTTTCTATCTC	NA	False	NA	-2	True	ATTAAA	-16	NA	76070472	75937121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ES.5513.2	chr11	-	2617	21	NIC	ENSMUSG00000017288.16	novel	2833	22	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	19.3548443548379	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCTTATTTTCTATC	NA	False	NA	-4	True	ATTAAA	-14	NA	76070445	75937123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ES.5513.3	chr11	-	1705	12	NNC	ENSMUSG00000017288.16	novel	2645	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	23.6003221717749	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCTTATTTTCTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	76070437	75937124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76070228
ES.5513.4	chr11	-	2506	21	NIC	ENSMUSG00000017288.16	novel	2833	22	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	19.5092285854669	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCTTATTTTCTAT	NA	False	NA	-5	True	ATTAAA	-13	NA	76070462	75937124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ES.5513.6	chr11	-	174	1	Intergenic	novelGene_4325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	75946566	75946392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_75946400_75946600
ES.5513.7	chr11	-	2110	15	ISM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	24	34639	1	-17880	5prime_fragment	FALSE	canonical	3	37	junction_4	11.4820178842344	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCAGCCTTTCCTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	76070449	75971690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ES.5513.8	chr11	-	625	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	3	22	-1	-22	multi-exon	FALSE	canonical	3	20	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAAAAATTACTT	NA	False	NA	-31	True	NA	NA	NA	76070461	76067806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76068209_76070238
ES.5513.9	chr11	-	180	1	Intergenic	novelGene_4331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTCTCAACCTT	1128	False	NA	NA	False	NA	NA	NA	76068557	76068377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76068400_76068600
ES.5514.1	chr11	+	2175	5	FSM	ENSMUSG00000069808.14	ENSMUST00000129853.8	962	5	27	-1240	27	-3	multi-exon	TRUE	canonical	1	2	junction_1	21.775846711437	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGTTATGTGCCCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	76070523	76100239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76070813_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ES.5514.2	chr11	+	175	1	Intergenic	novelGene_4333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAATGA	1289	False	NA	NA	False	NA	NA	NA	76090723	76090898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76090700_76090900
ES.5514.3	chr11	+	2236	5	NNC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.2654262230036	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3373	False	NA	NA	False	ATTAAA	-16	NA	76092807	76100241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098124_76098735
ES.5514.4	chr11	+	1948	4	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	-22	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	24.0739601136904	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTATGTGCCCTGG	3384	False	NA	NA	False	ATTAAA	-15	NA	76092818	76100240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76093082_76093377_76093462_76097953_76098050_76098735
ES.5514.5	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTATGTGCCCTGGC	3405	False	NA	NA	False	ATTAAA	-16	NA	76092839	76100241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ES.5514.6	chr11	+	1053	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	1	1076	1	167	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCACTTTTTGTTTTGT	3407	False	NA	NA	False	TTTAAA	-38	NA	76092841	76099166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ES.5514.7	chr11	+	3347	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	8	-1225	8	1225	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTACTCCTTTCAC	3414	False	NA	NA	False	AAGAAA	-16	NA	76092848	76101467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ES.5514.8	chr11	+	5268	2	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	1357	-5	intron_retention	FALSE	canonical	3	59	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATTTGTTATGTGCCC	4849	False	NA	NA	False	ATTAAA	-12	NA	76094283	76100237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76098050_76098735
ES.5515.1	chr11	+	1096	2	FSM	ENSMUSG00000038057.5	ENSMUST00000040806.5	581	2	-516	1	-516	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTGGAGTCTGTGGC	NA	False	NA	NA	False	AATAAA	-14	NA	76107917	76109491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76108575_76109052
ES.5516.1	chr11	+	157	1	Intergenic	novelGene_4334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	76120229	76120386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76120200_76120400
ES.5517.1	chr11	+	1527	4	NNC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	-7	3	intron_retention	FALSE	canonical	0	0	junction_1	66.0773956979406	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTGTTTGCAGGTGT	564	False	NA	26	True	ATTAAA	-34	NA	76134554	76141448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76134573_76134736_76135350_76138172_76138341_76140720
ES.5517.2	chr11	+	1467	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	31	12	10	-12	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCATTTTACCCATATG	581	False	NA	11	True	ATTAAA	-19	NA	76134571	76141433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ES.5517.3	chr11	+	4479	2	NIC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	24	-1	intron_retention	FALSE	canonical	3	136	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATATGAGTGTTTGCAG	595	False	NA	22	True	ATTAAA	-30	NA	76134585	76141444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76138341_76140720
ES.5517.4	chr11	+	3808	1	NIC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	28	2687	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATGTGTACATGTGTA	599	False	NA	NA	False	NA	NA	NA	76134589	76138397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76134600_76138400
ES.5517.5	chr11	+	736	3	NNC	ENSMUSG00000038046.5	novel	1510	4	NA	NA	41	2646	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	68.5	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAATAAAAT	612	False	NA	NA	False	AGTAAA	-33	NA	76134602	76138356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76134913_76135107_76135350_76138172
ES.5518.1	chr11	-	4641	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	126	-1227	-21	1227	multi-exon	FALSE	canonical	3	437	junction_1	0	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTTTTTATGTTTTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	76108364	76100169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76104750_76108303
ES.5518.10	chr11	-	2525	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	26	-1117	-24	1117	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTGAATAGGTAAACTG	NA	False	NA	0	True	NA	NA	NA	76134525	76111218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.11	chr11	-	1928	10	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	2	1115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	235.784951194678	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGGTGAATAGGTAAAC	NA	False	NA	-2	True	NA	NA	NA	76134499	76111220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76111816_76112384_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.12	chr11	-	2372	8	NIC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	2	1111	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	263.467381708799	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATAATGGTGAATAGGT	NA	False	NA	-6	True	NA	NA	NA	76134499	76111224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76131698_76131749_76134380
ES.5518.13	chr11	-	2305	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	-2	-869	-2	869	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	76134553	76111466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.14	chr11	-	2178	9	NNC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	1	852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.464373693238	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	76134500	76111483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76112858_76123847_76123935_76124084_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.15	chr11	-	2105	8	NIC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	-14	852	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	266.980470125759	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	76134515	76111483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76130277_76130399_76131698_76131749_76134380
ES.5518.18	chr11	-	2064	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	26	-656	-24	656	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGGGGCTGGCGAGA	NA	False	NA	NA	False	NA	NA	NA	76134525	76111679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.19	chr11	-	1224	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	-6	216	-6	68	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATATGGAATATTACTC	NA	False	NA	-4	True	ATTAAA	-33	NA	76134557	76112551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.20	chr11	-	1095	9	FSM	ENSMUSG00000017286.16	ENSMUST00000170017.8	1195	9	-29	129	-5	58	multi-exon	FALSE	canonical	1	7	junction_7	244.869352921104	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGAGACAACTATATGG	NA	False	NA	-14	True	ATTAAA	-23	NA	76134506	76112561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130331_76131698_76131749_76134380
ES.5518.21	chr11	-	1107	9	NIC	ENSMUSG00000017286.16	novel	1434	9	NA	NA	2	42	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	246.961915080038	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTTATTGTCCAGAC	NA	False	NA	29	True	ATTAAA	-7	NA	76134499	76112577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134413
ES.5518.3	chr11	-	4403	10	NNC	ENSMUSG00000017286.16	novel	4203	9	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.784951194678	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76134517	76101396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76104750_76112685_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.4	chr11	-	4007	8	NNC	ENSMUSG00000017286.16	novel	4203	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	339.055410557878	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76134498	76101396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76104750_76112796_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76131698_76131749_76134380
ES.5518.5	chr11	-	4322	10	NNC	ENSMUSG00000017286.16	novel	4203	9	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	229.317721260156	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGCCTTTCTCAGAA	NA	False	NA	-2	True	AATAAA	-21	NA	76134548	76101397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76104750_76112796_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.6	chr11	-	3554	3	NNC	ENSMUSG00000049396.7	novel	3540	2	NA	NA	-7856	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	218.5	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGCCTTTCTCAGAA	NA	False	NA	-2	True	AATAAA	-21	NA	76116346	76101397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76104750_76108303_76108349_76116189
ES.5518.7	chr11	-	4200	9	FSM	ENSMUSG00000017286.16	ENSMUST00000169701.8	4203	9	-5	8	1	-8	multi-exon	FALSE	canonical	0	0	junction_1	249.232321338947	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTATCTTGAGCCTTT	NA	False	NA	-9	True	AATAAA	-14	NA	76134494	76101404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76104750_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5518.8	chr11	-	1211	1	NIC	ENSMUSG00000049396.7	novel	3540	2	NA	NA	-11	761	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGAGTTTCCCCTGGC	NA	False	NA	NA	False	NA	NA	NA	76108354	76107143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76107100_76108400
ES.5518.9	chr11	-	3324	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	31	-1921	-19	1921	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGGCTCATACTTTA	NA	False	NA	NA	False	NA	NA	NA	76134520	76110414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ES.5519.1	chr11	-	4622	1	Intergenic	novelGene_4335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATATGAATGTGTCTG	7782	False	NA	NA	False	AATGAA	-26	NA	76147191	76142569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76142600_76147200
ES.552.1	chr1	-	176	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTCCAGTCTGTTTA	7999	False	NA	NA	False	NA	NA	NA	59540797	59540621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59540600_59540800
ES.5520.1	chr11	+	171	1	Intergenic	novelGene_4337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGCGAGCAGAGTT	2575	False	NA	NA	False	NA	NA	NA	76182252	76182423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76182300_76182400
ES.5521.1	chr11	+	188	1	Intergenic	novelGene_4338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTATCTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	76272795	76272983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76272800_76273000
ES.5522.1	chr11	+	2010	1	Intergenic	novelGene_4339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCGATTTTTAGCCAC	NA	False	NA	NA	False	AAAACA	-10	NA	76283438	76285448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76283400_76285400
ES.5523.1	chr11	-	2397	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111686	-28	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCGCTTGGGCCTTCC	1414	False	NA	NA	False	AATAAA	-28	NA	76178208	76148051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
ES.5523.10	chr11	-	1531	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-30	1254	-30	-1254	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCCTTGTTTCTACA	NA	False	NA	NA	False	NA	NA	NA	76289996	76149277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ES.5523.11	chr11	-	392	1	Intergenic	novelGene_4336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76162229	76161837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76161800_76162200
ES.5523.12	chr11	-	2523	1	Genic_Genomic	ENSMUSG00000020844.7	novel	NA	NA	NA	NA	-60	-37875	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	76290026	76287503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_76287500_76290000
ES.5523.2	chr11	-	2747	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-35	43	-35	-43	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCTGACCTCACCCT	NA	False	NA	NA	False	AATAAA	-13	NA	76290001	76148066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ES.5523.3	chr11	-	1722	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111634	-755	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTTAGTTTCTTC	1362	False	NA	0	True	NA	NA	NA	76178260	76148778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
ES.5523.4	chr11	-	1995	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	-2	762	-2	-762	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	NA	False	NA	-7	True	NA	NA	NA	76289968	76148785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ES.5523.5	chr11	-	1787	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111629	-762	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	1357	False	NA	-7	True	NA	NA	NA	76178265	76148785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
ES.5523.6	chr11	-	1937	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	-39	-762	at_least_one_novel_splicesite	FALSE	non_canonical	2	11	junction_1	37.4716219155188	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	NA	False	NA	-7	True	NA	NA	NA	76290005	76148785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76149521_76152409_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ES.5523.8	chr11	-	3351	7	NIC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	-17	-762	intron_retention	FALSE	canonical	3	67	junction_6	18.7475924380231	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	NA	False	NA	-7	True	NA	NA	NA	76289983	76148785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76149574_76152367_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ES.5524.1	chr11	+	177	1	Intergenic	novelGene_4340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	76291783	76291960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76291800_76292000
ES.5525.1	chr11	+	1020	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	-27	-247	-27	247	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAGTATCTTTGCTGTCC	NA	False	NA	21	True	AGTAAA	-31	NA	76297750	76305402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
ES.5525.2	chr11	+	2163	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	-26	-1391	-26	-572	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACCTTTGCTGTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	76297751	76306546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
ES.5525.3	chr11	+	1313	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	-217	1721	-26	242	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGTTAGTATCTTTGC	NA	False	NA	16	True	AGTAAA	-26	NA	76297751	76305397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ES.5525.4	chr11	+	2440	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	-194	571	-3	-571	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTGCTGTCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	76297774	76306547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ES.5525.5	chr11	+	1954	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	12	851	12	-851	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGCCACTGAACTG	NA	False	NA	NA	False	NA	NA	NA	76297980	76306267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ES.5525.6	chr11	+	883	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	26	1908	-22	55	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACTGTTACGCATTAA	NA	False	NA	6	True	AGTAAA	-18	NA	76297994	76305210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ES.5525.7	chr11	+	2021	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	-22	-1637	-22	-573	multi-exon	FALSE	canonical	3	21	junction_1	125	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACCTTTGCTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	76297994	76306545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76298269_76301952_76302026_76304871
ES.5525.8	chr11	+	214	1	Intergenic	novelGene_4342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTATGGGTGTTTT	NA	False	NA	NA	False	AAAAAG	-5	NA	76302252	76302466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76302300_76302500
ES.5526.1	chr11	-	171	1	Intergenic	novelGene_4341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTGCAAAACCCGAGT	2620	False	NA	NA	False	NA	NA	NA	76301558	76301387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76301400_76301600
ES.5527.1	chr11	+	1320	1	Intergenic	novelGene_4343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	76320328	76321648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76320300_76321600
ES.5528.1	chr11	+	177	1	Intergenic	novelGene_4345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	76366859	76367036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76366900_76367000
ES.5529.1	chr11	+	176	1	Intergenic	novelGene_4350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGAGCAAGCAGGGACTG	NA	False	NA	NA	False	NA	NA	NA	76488535	76488711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76488500_76488700
ES.553.1	chr1	-	177	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGTGAAATCAATC	NA	False	NA	NA	False	NA	NA	NA	59561600	59561423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59561400_59561600
ES.5530.1	chr11	+	393	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	-32	-50	-32	50	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGACCTCACCTGTAGC	NA	False	NA	NA	False	AATAAA	-35	NA	76492112	76492505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76492100_76492500
ES.5531.1	chr11	+	962	1	Intergenic	novelGene_4351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATGAATAGAAGAAAAGAA	424	False	NA	NA	False	NA	NA	NA	76498430	76499392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76498400_76499400
ES.5532.1	chr11	-	5481	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	-85	-2	-85	2	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGGTGTGGTTGTTTGT	6034	False	NA	1	True	AATAAA	-38	NA	76462446	76307557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.11	chr11	-	5446	2	NIC	ENSMUSG00000017631.20	novel	4811	22	NA	NA	12770	0	intron_retention	FALSE	canonical	3	249	junction_1	0	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76315276	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310709_76312978
ES.5532.12	chr11	-	6094	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.0874867425094	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76514587	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76309971_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.13	chr11	-	5031	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	367	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	75.5141741388183	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6486	False	NA	-2	True	AATAAA	-35	NA	76461994	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76451001_76451192_76461856
ES.5532.14	chr11	-	5207	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_6	58.3480048452515	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6273	False	NA	-2	True	AATAAA	-35	NA	76462207	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315818_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.15	chr11	-	7262	22	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-209	0	intron_retention	FALSE	canonical	0	0	junction_1	64.2703685387663	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76514593	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310014_76310560_76310709_76312978_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.16	chr11	-	6147	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-666	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.2451433474751	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76515050	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76309971_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514900
ES.5532.18	chr11	-	5310	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	59.1522932915782	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	6277	False	NA	-2	True	AATAAA	-35	NA	76462203	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313160_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.19	chr11	-	5611	23	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	644	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.5285450255069	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76513740	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342796_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.2	chr11	-	5264	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	125	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	59.0019610263818	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGGTGTGGTTGTTTG	6244	False	NA	0	True	AATAAA	-37	NA	76462236	76307558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310014_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.20	chr11	-	6232	23	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	63.864849551725	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCCATGGTGTGGTTGT	NA	False	NA	-3	True	AATAAA	-34	NA	76514359	76307561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316141_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.21	chr11	-	5077	3	ISM	ENSMUSG00000017631.20	ENSMUST00000065028.14	4444	18	43842	-15	12597	-1	intron_retention	FALSE	canonical	3	249	junction_2	15.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCCATGGTGTGGTTGT	NA	False	NA	-3	True	AATAAA	-34	NA	76315449	76307561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76310020_76310560_76310709_76312978
ES.5532.23	chr11	-	6945	23	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-218	-2	intron_retention	FALSE	non_canonical	0	0	junction_19	74.1925682941536	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76514602	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370003_76377259_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.25	chr11	-	6494	22	NIC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	17	-2	intron_retention	FALSE	canonical	3	102	junction_21	38.2437581052596	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76514367	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.26	chr11	-	7262	21	NIC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	38	-2	intron_retention	FALSE	canonical	3	102	junction_20	38.8997107958401	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76514346	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76314009_76314859_76315000_76315739_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.27	chr11	-	6343	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	74.4007693518772	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76514360	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76511584_76511684_76513002
ES.5532.28	chr11	-	5452	7	ISM	ENSMUSG00000017631.20	ENSMUST00000065028.14	4444	18	40843	-14	9598	-2	3prime_fragment	FALSE	canonical	3	232	junction_4	18.0500846412297	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76318448	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092
ES.5532.29	chr11	-	5094	22	NIC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	989	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	57.5766865140047	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76513395	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76513002
ES.5532.30	chr11	-	5079	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	11167	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	56.6749467293694	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCCCATGGTGTGGTTG	NA	False	NA	-4	True	AATAAA	-33	NA	76451194	76307562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76451001
ES.5532.31	chr11	-	5104	22	NIC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	187	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	59.8110403204767	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCCCATGGTGTGGTT	6306	False	NA	-5	True	AATAAA	-32	NA	76462174	76307563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76399713_76399899_76461856
ES.5532.33	chr11	-	6162	22	NIC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	64.0732290805392	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCCCATGGTGTGGTT	NA	False	NA	-5	True	AATAAA	-32	NA	76514378	76307563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76399713_76399899_76513002
ES.5532.35	chr11	-	4988	23	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	1271	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	63.1975127662055	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCCCATGGTGTGGTT	NA	False	NA	-5	True	AATAAA	-32	NA	76513113	76307563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76369999_76377263_76377363_76399713_76399899_76513002
ES.5532.38	chr11	-	6044	23	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-203	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.69843980105	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCAGCCCCATGGTGT	NA	False	NA	-9	True	AATAAA	-28	NA	76514587	76307567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343152_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350199_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.4	chr11	-	5381	22	FSM	ENSMUSG00000017631.20	ENSMUST00000108408.9	3534	22	523	-2370	51	0	multi-exon	FALSE	canonical	3	10	junction_21	55.58120043027	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	3175	False	NA	-1	True	AATAAA	-36	NA	76385759	76307559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76385082
ES.5532.40	chr11	-	6798	22	NIC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	6	-7	intron_retention	FALSE	canonical	3	102	junction_21	37.7190352949643	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCAGCCCCATGGTGT	NA	False	NA	-9	True	AATAAA	-28	NA	76514378	76307567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.45	chr11	-	5193	23	NNC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	124	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	56.6749467293694	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCAGCCCCATGGTGT	6243	False	NA	-9	True	AATAAA	-28	NA	76462237	76307567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399839_76461865
ES.5532.47	chr11	-	6047	22	NIC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	119	0	intron_retention	FALSE	canonical	3	154	junction_21	29.2942689789545	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGCACAAAACTCAGCC	6238	False	NA	-18	True	AATAAA	-19	NA	76462242	76307576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.5	chr11	-	6249	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-308	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76514692	76307559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.50	chr11	-	3577	9	NNC	ENSMUSG00000017631.20	novel	4444	18	NA	NA	-14648	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.912125110251	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTGCACAAAACTCAG	NA	False	NA	-20	True	AATAAA	-17	NA	76342694	76307578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315818_76316092_76316153_76330409_76330863_76342678
ES.5532.52	chr11	-	3146	8	NNC	ENSMUSG00000017631.20	novel	4444	18	NA	NA	195	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.156934728732	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACATTTGCACAAAACTC	NA	False	NA	-22	True	AATAAA	-15	NA	76327851	76307580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76309971_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76327794
ES.5532.55	chr11	-	3186	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	157	2051	157	319	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTGTTCTTTCATTT	6276	False	NA	NA	False	NA	NA	NA	76462204	76309610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.56	chr11	-	4154	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-266	317	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGCTTTGTTCTTTCAT	NA	False	NA	NA	False	NA	NA	NA	76514650	76309612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.57	chr11	-	5581	17	NNC	ENSMUSG00000017631.20	novel	2392	9	NA	NA	176	-13467	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	66.5347359936898	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTGTGTGTGTGTGT	6295	False	NA	NA	False	NA	NA	NA	76462185	76327340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76330863_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.58	chr11	-	2670	17	NNC	ENSMUSG00000017631.20	novel	2392	9	NA	NA	156	15098	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	66.5347359936898	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATCCCTCATTGCCTC	6275	False	NA	NA	False	NA	NA	NA	76462205	76330271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76330863_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.59	chr11	-	3473	15	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-493	697	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	75.4407795856445	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	76514877	76344672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514731
ES.5532.60	chr11	-	2361	10	ISM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	150	41562	150	178	5prime_fragment	FALSE	canonical	3	154	junction_9	36.9337077130377	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGAAGGAAAGAAGGG	6269	False	NA	NA	False	NA	NA	NA	76462211	76349121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ES.5532.61	chr11	-	5168	10	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-164	178	intron_retention	FALSE	canonical	3	44	junction_9	80.1526321741491	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGAAGGAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	76514548	76349121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
ES.5532.62	chr11	-	1540	9	NNC	ENSMUSG00000017631.20	novel	784	6	NA	NA	-32	178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.3724069715376	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGAAGGAAAGAAGGG	NA	False	NA	NA	False	NA	NA	NA	76399853	76349121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76349243_76351609_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713
ES.5532.64	chr11	-	3357	10	ISM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	10	41583	10	157	5prime_fragment	FALSE	canonical	3	102	junction_9	51.6956907724855	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76514374	76349142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ES.5532.65	chr11	-	2941	2	Intergenic	novelGene_4344	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATTGC	NA	False	NA	NA	False	AGTAAA	-24	NA	76369732	76366583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76366843_76367050
ES.5532.66	chr11	-	6517	1	Intergenic	novelGene_4346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAACAAACAAACAAA	2796	False	NA	NA	False	NA	NA	NA	76396349	76389832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76389800_76396300
ES.5532.67	chr11	-	4303	1	Intergenic	novelGene_4347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTGATCATAGCTATAT	9538	False	NA	NA	False	NA	NA	NA	76427675	76423372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76423400_76427700
ES.5532.68	chr11	-	2633	1	Intergenic	novelGene_4348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76453194	76450561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76450600_76453200
ES.5532.69	chr11	-	3095	1	Intergenic	novelGene_4349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-39	NA	76454971	76451876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76451900_76455000
ES.5532.7	chr11	-	5053	22	NIC	ENSMUSG00000017631.20	novel	5394	23	NA	NA	156	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	57.5766865140047	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	6275	False	NA	-1	True	AATAAA	-36	NA	76462205	76307559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76461856
ES.5532.8	chr11	-	4071	8	NIC	ENSMUSG00000017631.20	novel	4811	22	NA	NA	-641	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	92.4456817900796	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76328687	76307560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76327774
ES.5533.1	chr11	-	213	1	Intergenic	novelGene_4352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTATAAGTGTTTTT	1936	False	NA	NA	False	NA	NA	NA	76526180	76525967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76526000_76526200
ES.5534.1	chr11	-	156	1	Intergenic	novelGene_4353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGGGGAGTAAAAA	455	False	NA	NA	False	NA	NA	NA	76547982	76547826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76547800_76548000
ES.5535.1	chr11	+	181	1	Intergenic	novelGene_4354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	76575406	76575587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76575400_76575600
ES.5536.1	chr11	-	168	1	Intergenic	novelGene_4355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGATGGCTTG	NA	False	NA	NA	False	NA	NA	NA	76593455	76593287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76593300_76593500
ES.5537.1	chr11	+	4189	1	Antisense	novelGene_ENSMUSG00000010392.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACACAAAGAGCTGACT	NA	False	NA	NA	False	NA	NA	NA	76638815	76643004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_76638800_76643000
ES.5538.1	chr11	-	4293	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	-1	-3	-1	3	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGGTTATCTGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	76654406	76617424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.10	chr11	-	2425	8	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	0	-1816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.274130697192	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACAGCCAGTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76654393	76619243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76621060_76625394_76625478_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652066_76652182_76654345
ES.5538.11	chr11	-	5192	8	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	1	-1816	intron_retention	FALSE	non_canonical	0	0	junction_1	114.840084021039	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACAGCCAGTCTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	76654392	76619243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76621068_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652066_76652182_76654345
ES.5538.12	chr11	-	1512	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	5	2772	5	-2772	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAATCAGCACCTGTCAT	NA	False	NA	NA	False	GATAAA	-18	NA	76654400	76620199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.13	chr11	-	4015	8	NIC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	0	-2992	intron_retention	FALSE	canonical	3	229	junction_6	28.0502464611385	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGGTTCTGTGAGATGT	NA	False	NA	NA	False	AAGAAA	-12	NA	76654393	76620419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76621060_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.14	chr11	-	1188	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	9	3092	-3	-3092	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTGTGATGAGTAATC	NA	False	NA	NA	False	AATAAA	-23	NA	76654396	76620519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.15	chr11	-	978	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	9	3302	-3	-3302	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAACAAAAGGTTTCC	NA	False	NA	NA	False	AATACA	-22	NA	76654396	76620729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.16	chr11	-	1583	4	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	8	26553	-4	-4647	5prime_fragment	FALSE	canonical	3	229	junction_2	24.7296493213219	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGATTGTGGGGGTGGG	NA	False	NA	NA	False	NA	NA	NA	76654397	76643980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.17	chr11	-	2841	2	ISM	ENSMUSG00000010392.9	ENSMUST00000137767.2	411	5	7336	4647	7336	-4647	internal_fragment	FALSE	canonical	3	285	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGATTGTGGGGGTGGG	NA	False	NA	NA	False	NA	NA	NA	76647057	76643980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76645303_76645538
ES.5538.2	chr11	-	4286	9	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.5410617938805	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTTGGTTATCTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	76654392	76617425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76621068_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.3	chr11	-	4271	9	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	80.3270657997664	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTTTGGTTATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	76654393	76617427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652066_76652182_76654345
ES.5538.5	chr11	-	4510	10	NNC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	108.658940875101	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCATGTCTTTGGTTATC	NA	False	NA	NA	False	AATAAA	-14	NA	76654393	76617429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76646357_76646593_76652060_76652182_76654345
ES.5538.7	chr11	-	7005	8	NIC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	229	junction_6	28.0502464611385	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCATGTCTTTGGTT	NA	False	NA	NA	False	AATAAA	-11	NA	76654396	76617432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76621060_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.8	chr11	-	2480	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	1	1808	1	-1808	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTCTTTTCTACTGGT	NA	False	NA	NA	False	AATAAA	-20	NA	76654404	76619235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5538.9	chr11	-	5190	8	NIC	ENSMUSG00000010392.9	novel	4289	9	NA	NA	4	-1813	intron_retention	FALSE	canonical	3	229	junction_6	28.0502464611385	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGCCAGTCTTTTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	76654389	76619240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76621060_76625394_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ES.5539.1	chr11	+	211	1	Intergenic	novelGene_4356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAGTTTGAGCTTAT	9133	False	NA	NA	False	NA	NA	NA	76689108	76689319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76689100_76689300
ES.554.1	chr1	+	1504	7	NNC	ENSMUSG00000047361.17	novel	3595	20	NA	NA	-55	15985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCACCAGGTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	59583324	59621780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59583889_59589070_59589199_59595314_59595484_59597244_59597386_59601801_59601970_59605755_59605864_59621554
ES.5540.1	chr11	+	181	1	Intergenic	novelGene_4357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTATGATTAAATC	8514	False	NA	NA	False	NA	NA	NA	76706017	76706198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_76706000_76706200
ES.5541.1	chr11	-	9165	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-3	-1216	-3	1216	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAACGTCAGCATGTCT	NA	False	NA	NA	False	AATACA	-20	NA	76737847	76668033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.10	chr11	-	7064	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-51	933	-51	-933	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCGTTTCTGAGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	76737895	76670182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.12	chr11	-	7035	21	NNC	ENSMUSG00000020841.6	novel	7946	21	NA	NA	-30	-937	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.4863579968409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGCTGCGTTTCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	76737874	76670186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693180_76696824_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.13	chr11	-	6281	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	10	1655	10	-1655	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTGAGTCTTTAATGA	NA	False	NA	NA	False	AATGAA	-17	NA	76737834	76670904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.14	chr11	-	4787	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-6	3165	-6	-3165	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTCCAAGCTGGGT	NA	False	NA	NA	False	AATAAA	-23	NA	76737850	76672414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.15	chr11	-	4447	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-34	3533	-34	-3533	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATGGGGCAGCCGCTT	NA	False	NA	NA	False	TTTAAA	-30	NA	76737878	76672782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.16	chr11	-	3389	16	ISM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	37	12621	37	-4900	5prime_fragment	FALSE	canonical	3	50	junction_12	8.49208782076325	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCATCCATCAATGCACA	NA	False	NA	NA	False	AAGAAA	-32	NA	76737807	76681870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.17	chr11	-	1589	5	ISM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	44764	16284	6572	-8563	internal_fragment	FALSE	canonical	3	58	junction_3	4.96865172858795	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATAGTCTACATTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	76693080	76685533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057
ES.5541.18	chr11	-	3457	1	Genic_Genomic	ENSMUSG00000020841.6	novel	NA	NA	NA	NA	-32	-37878	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGGTGTGGATACAGA	NA	False	NA	NA	False	AATAAA	-14	NA	76737876	76734419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_76734400_76737900
ES.5541.2	chr11	-	7899	21	NNC	ENSMUSG00000020841.6	novel	7946	21	NA	NA	5	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	16.3262824917371	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTGTGTTGTCTCA	NA	False	NA	-2	True	TATAAA	-22	NA	76737839	76669245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683652_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.3	chr11	-	8001	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-53	-2	-53	2	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTGTGTGTTGTCT	NA	False	NA	-4	True	TATAAA	-20	NA	76737897	76669247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.4	chr11	-	5516	22	NNC	ENSMUSG00000020841.6	novel	7946	21	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.1242342362425	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGTCTTTCTTTGTGT	NA	False	NA	-11	True	TATAAA	-13	NA	76737841	76669254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76670518_76672939_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.5	chr11	-	7160	24	NNC	ENSMUSG00000020841.6	novel	7946	21	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.3161484511518	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTGTCTTTCTTTGTG	NA	False	NA	-12	True	TATAAA	-12	NA	76737850	76669255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76669348_76669714_76671194_76671686_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76697193_76697268_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.6	chr11	-	7900	21	NNC	ENSMUSG00000020841.6	novel	7946	21	NA	NA	-22	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	16.519987893458	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTTGTCTTTCTTTGT	NA	False	NA	-13	True	TATAAA	-11	NA	76737866	76669256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686402_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5541.9	chr11	-	7738	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	-7	215	-7	-215	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACCCATTTGTCTTAA	NA	False	NA	NA	False	NA	NA	NA	76737851	76669464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ES.5542.1	chr11	-	958	1	Intergenic	novelGene_4358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAAGTCTCATTCATTT	NA	False	NA	NA	False	NA	NA	NA	76752003	76751045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76751000_76752000
ES.5543.1	chr11	-	1573	2	Intergenic	novelGene_4359	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAAAGTTCAAGGGTTT	NA	False	NA	0	True	NA	NA	NA	76815481	76813227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76814503_76815183
ES.5544.1	chr11	+	2345	13	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	-8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	209.685015095394	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGGCGTGTCTGGTCTG	NA	False	NA	32	True	AATAAA	-21	NA	76836321	76878207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836436_76836597_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.11	chr11	+	2086	11	NIC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	14	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	227.353667223557	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAAGCCGGCGTGTCTG	NA	False	NA	27	True	AATAAA	-16	NA	76836578	76878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.13	chr11	+	1947	10	NNC	ENSMUSG00000020840.11	novel	1490	11	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.707047508919	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAAGCCGGCGTGTCTG	NA	False	NA	27	True	AATAAA	-16	NA	76836580	76878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836720_76841857_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.15	chr11	+	5432	11	NIC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	16	-2	intron_retention	FALSE	canonical	3	631	junction_4	59.333043070451	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836580	76878203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76862805_76877301
ES.5544.16	chr11	+	4890	11	NIC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	27	17	intron_retention	FALSE	canonical	3	631	junction_4	59.333043070451	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTTGCTCTCCTCATCT	NA	False	NA	2	True	AATAAA	-17	NA	76836591	76877672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76862805_76877301
ES.5544.17	chr11	+	1894	10	NNC	ENSMUSG00000020840.11	novel	1490	11	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	228.707047508919	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCAAGCCGGCGTGTC	NA	False	NA	25	True	AATAAA	-14	NA	76836592	76878200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836720_76841896_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.19	chr11	+	1478	10	NIC	ENSMUSG00000020840.11	novel	1490	11	NA	NA	-35	65	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	235.871329225528	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGATGTCATTGTCCTC	NA	False	NA	50	True	NA	NA	NA	76836611	76877720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76837266_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.2	chr11	+	2346	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	153	-2	-72	2	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGGCGTGTCTGGTCTG	NA	False	NA	32	True	AATAAA	-21	NA	76836482	76878207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.20	chr11	+	2206	12	NIC	ENSMUSG00000020840.11	novel	687	6	NA	NA	-26	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	213.342815732786	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCGTGTCTGGTCTGTAA	NA	False	NA	35	True	AATAAA	-24	NA	76836846	76878210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836941_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.21	chr11	+	5962	6	NIC	ENSMUSG00000020840.11	novel	1490	11	NA	NA	1898	-3	intron_retention	FALSE	canonical	2	2	junction_3	294.141870531891	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAAGCCGGCGTGTCTG	NA	False	NA	27	True	AATAAA	-16	NA	76838791	76878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76843416_76845335_76845429_76856640_76856797_76859428_76859547_76862734_76862805_76877301
ES.5544.3	chr11	+	1639	11	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	-53	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.40102552176	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCGTAGCATTTTAATTG	NA	False	NA	35	True	NA	NA	NA	76836501	76877705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836720_76840773_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.4	chr11	+	1844	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	172	481	-53	69	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTCATTGTCCTCTGTC	NA	False	NA	54	True	NA	NA	NA	76836501	76877724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.6	chr11	+	2082	11	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	219.40102552176	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGGCGTGTCTGGTCTG	NA	False	NA	32	True	AATAAA	-21	NA	76836560	76878207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836720_76840773_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5544.7	chr11	+	8745	8	NIC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	2	2	junction_6	262.724656052604	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAAGCCGGCGTGTCTGG	NA	False	NA	28	True	AATAAA	-17	NA	76836560	76878203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76859428_76862805_76877301
ES.5544.8	chr11	+	2083	11	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	330.334391185659	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCCGGCGTGTCTGGT	NA	False	NA	29	True	AATAAA	-18	NA	76836564	76878204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_76836720_76840773_76840896_76841869_76842012_76843326_76843416_76845323_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859543_76862734_76862805_76877301
ES.5544.9	chr11	+	2000	10	NIC	ENSMUSG00000020840.11	novel	1490	11	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	235.871329225528	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAAGCCGGCGTGTCTG	NA	False	NA	27	True	AATAAA	-16	NA	76836571	76878202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_76836720_76837067_76837266_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ES.5545.1	chr11	-	2885	3	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	29040	-190	28642	190	3prime_fragment	FALSE	canonical	3	277	junction_2	8	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTTAATGTTTATT	NA	False	NA	NA	False	ATTAAA	-1	NA	76940221	76934927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76937581_76939178_76939288_76940098
ES.5545.10	chr11	-	5075	4	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	24404	1153	24006	-1153	3prime_fragment	FALSE	canonical	3	277	junction_2	11.0855260988773	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGAGTTTTTTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	76944857	76936270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409
ES.5545.11	chr11	-	3549	6	NIC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	4	-1159	intron_retention	FALSE	canonical	3	222	junction_5	28.9274955708233	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTTTTGAGTTTT	NA	False	NA	-8	True	AATAAA	-11	NA	76969257	76936276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.12	chr11	-	2743	6	NIC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	23	-1159	intron_retention	FALSE	canonical	3	222	junction_5	29.8422519257512	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTGCTTTTGAGTTTT	NA	False	NA	-8	True	AATAAA	-11	NA	76969238	76936276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_76937581_76939178_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.13	chr11	-	1230	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	16	1868	16	-1868	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGCACACAAAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	76969245	76936985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.14	chr11	-	175	1	Intergenic	novelGene_4360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAATACCAC	NA	False	NA	NA	False	NA	NA	NA	76943019	76942844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_76942800_76943000
ES.5545.2	chr11	-	3321	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	-204	-3	-204	3	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCCTGTAAATTTATTC	NA	False	NA	-2	True	AATAAA	-31	NA	76969465	76935114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.3	chr11	-	3194	8	NNC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	17	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.052952915731	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGGAACCTGACA	NA	False	NA	-18	True	AATAAA	-15	NA	76969244	76935130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945401_76945512_76945769_76945827_76967479_76967571_76969204
ES.5545.4	chr11	-	4583	7	NNC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	9	-13	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	104.584362544737	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGGAACCTGACA	NA	False	NA	-18	True	AATAAA	-15	NA	76969252	76935130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76943030_76945769_76945827_76967479_76967571_76969204
ES.5545.5	chr11	-	3211	8	NNC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	23	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	125.610509114485	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCATTGGAACCTGACA	NA	False	NA	-18	True	AATAAA	-15	NA	76969238	76935130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76942896_76943030_76945769_76945827_76967479_76967571_76969204
ES.5545.6	chr11	-	2761	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	15	338	15	-338	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTCAACATTTACTT	NA	False	NA	NA	False	AATAAA	-26	NA	76969246	76935455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.7	chr11	-	2437	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	5	672	5	-672	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGAGAAAATTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	76969256	76935789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.8	chr11	-	1956	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	7	1151	7	-1151	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGAGTTTTTTTGGTTT	NA	False	NA	0	True	AATAAA	-19	NA	76969254	76936268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ES.5545.9	chr11	-	2078	8	NNC	ENSMUSG00000037958.14	novel	3114	7	NA	NA	29	-1152	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	127.996492298876	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGAGTTTTTTTGGTT	NA	False	NA	-1	True	AATAAA	-18	NA	76969232	76936269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76947214_76947360_76967479_76967571_76969204
ES.5546.1	chr11	+	178	1	Intergenic	novelGene_4361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAGAAAAAAAAGA	4205	False	NA	NA	False	NA	NA	NA	77013477	77013655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77013500_77013700
ES.5547.1	chr11	+	3781	3	Antisense	novelGene_ENSMUSG00000050944.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATTAATTGGATCAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	77053366	77079667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77056785_77077605_77077761_77079459
ES.5548.1	chr11	+	9237	14	NNC	ENSMUSG00000037926.16	novel	9178	15	NA	NA	-90	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	5.91557967068627	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAAGTGTAACA	NA	False	NA	10	True	AATAAA	-20	NA	77107022	77351046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316494_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.10	chr11	+	6425	14	FSM	ENSMUSG00000037926.16	ENSMUST00000181283.3	4475	14	-44	-1906	-42	1906	multi-exon	FALSE	canonical	0	0	junction_4	5.26909039678268	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGTTCTGACATTAC	3584	False	NA	NA	False	NA	NA	NA	77239063	77348253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307243_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.11	chr11	+	5552	14	NNC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-41	1172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.17389899101546	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATTGTGGGTCTTTTGA	3585	False	NA	NA	False	TTTAAA	-12	NA	77239064	77347519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77239239_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.12	chr11	+	9102	14	NNC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.41927570616156	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTTTCAAGTGTAACAA	3594	False	NA	11	True	AATAAA	-21	NA	77239073	77351047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307237_77307310_77308291_77308358_77312041_77312124_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.13	chr11	+	5774	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-27	1267	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTATTTGTTTTAAA	3599	False	NA	NA	False	AATAAA	-18	NA	77239078	77347614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.14	chr11	+	4088	10	FSM	ENSMUSG00000037926.16	ENSMUST00000180554.2	3482	10	-6	-600	0	600	multi-exon	FALSE	canonical	3	8	junction_1	4.11261233851594	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAATAAAATC	3628	False	NA	NA	False	NA	NA	NA	77239107	77323583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611
ES.5548.15	chr11	+	204	1	Intergenic	novelGene_4365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCTTTGATGTATG	NA	False	NA	NA	False	NA	NA	NA	77246441	77246645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77246400_77246600
ES.5548.16	chr11	+	178	1	Intergenic	novelGene_4367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAG	NA	False	NA	NA	False	NA	NA	NA	77280602	77280780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77280600_77280800
ES.5548.17	chr11	+	158	1	Intergenic	novelGene_4368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	77315606	77315764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77315600_77315800
ES.5548.18	chr11	+	174	1	ISM	ENSMUSG00000037926.16	ENSMUST00000180554.2	3482	10	83404	292	40255	-292	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTCATTTTCA	NA	False	NA	NA	False	NA	NA	NA	77322517	77322691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77322500_77322700
ES.5548.2	chr11	+	9266	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	-88	0	-88	0	multi-exon	FALSE	canonical	2	7	junction_1	4.23361186078213	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAAGTGTAACA	NA	False	NA	10	True	AATAAA	-20	NA	77107024	77351046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.3	chr11	+	6473	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	-88	2793	-88	1906	multi-exon	FALSE	canonical	2	7	junction_1	4.23361186078213	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGTTCTGACATTAC	NA	False	NA	NA	False	NA	NA	NA	77107024	77348253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.4	chr11	+	4678	16	NNC	ENSMUSG00000037926.16	novel	9178	15	NA	NA	-41	49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.33368420080726	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATATTTTTGGTCATTTT	NA	False	NA	NA	False	AAAAAG	-44	NA	77107071	77346396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77107342_77201732_77201842_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.5	chr11	+	5790	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	-41	3429	-41	1270	multi-exon	FALSE	canonical	2	7	junction_1	4.23361186078213	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATTTGTTTTAAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	77107071	77347617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5548.6	chr11	+	311	1	Intergenic	novelGene_4362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGTTGCAGGTGGCCA	NA	False	NA	NA	False	GATAAA	-37	NA	77186941	77187252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77186900_77187300
ES.5548.7	chr11	+	152	1	Intergenic	novelGene_4363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATTAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77187481	77187633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77187500_77187600
ES.5548.8	chr11	+	178	1	Intergenic	novelGene_4364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	77197376	77197554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77197400_77197600
ES.5548.9	chr11	+	9221	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	-45	-3	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTTTCAAGTGTA	3581	False	NA	7	True	AATAAA	-17	NA	77239060	77351043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ES.5549.1	chr11	-	5427	1	FSM	ENSMUSG00000077649.3	ENSMUST00000104461.3	88	1	-612	-4727	-612	4727	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGGTTGCAAAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	77136453	77131026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77131000_77136500
ES.555.1	chr1	-	172	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	59596863	59596691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59596700_59596900
ES.5550.1	chr11	-	237	1	Antisense	novelGene_ENSMUSG00000083899.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAACTGCTCATAAAA	3008	False	NA	NA	False	NA	NA	NA	77185889	77185652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_77185700_77185900
ES.5551.1	chr11	-	159	1	Intergenic	novelGene_4366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77279335	77279176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77279200_77279300
ES.5552.1	chr11	+	2603	10	NNC	ENSMUSG00000020836.16	novel	1418	10	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.16227766016838	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTTGAAACCGCTTT	3987	False	NA	NA	False	AATAAA	-16	NA	77353260	77361309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77353581_77354736_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
ES.5552.2	chr11	+	2517	10	NIC	ENSMUSG00000020836.16	novel	2804	11	NA	NA	-65	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16227766016838	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTTGAAACCGCTTT	4132	False	NA	NA	False	AATAAA	-16	NA	77353405	77361309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77353581_77354677_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360201
ES.5552.3	chr11	+	2639	5	ISM	ENSMUSG00000020836.16	ENSMUST00000079770.3	1298	9	3355	-976	3355	-7	3prime_fragment	FALSE	canonical	1	1	junction_3	1.11803398874989	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCATCTGGTTTGAAAC	8818	False	NA	NA	False	AATAAA	-10	NA	77358091	77361303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360204
ES.5553.1	chr11	+	3707	20	NNC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	-3883	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	132.567444811397	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTAGAGGTTGGAGG	NA	False	NA	19	True	AATAAA	-22	NA	77380504	77398601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77380521_77384166_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391476_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.10	chr11	+	3889	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-273	-4	intron_retention	FALSE	canonical	3	379	junction_14	39.5094487406796	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTTGGAGGTGGGGCT	NA	False	NA	26	True	AATAAA	-29	NA	77384114	77398608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.11	chr11	+	4805	15	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-269	-21	intron_retention	FALSE	canonical	3	379	junction_11	42.6291554919774	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACTTCTGATGTCTAG	NA	False	NA	9	True	AATAAA	-12	NA	77384118	77398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391941_77393843_77393893_77394181_77394845_77395197_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.12	chr11	+	3662	20	NNC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	-263	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	101.985143668506	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTTGGAGGTGGGGCT	NA	False	NA	26	True	AATAAA	-29	NA	77384124	77398608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221_77398253_77398334
ES.5553.13	chr11	+	6247	16	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-253	-21	intron_retention	FALSE	canonical	3	379	junction_12	41.9393212470906	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACTTCTGATGTCTAG	NA	False	NA	9	True	AATAAA	-12	NA	77384134	77398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77393893_77394181_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.14	chr11	+	4044	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-251	-22	intron_retention	FALSE	canonical	3	379	junction_14	39.2405411431106	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACTTCTGATGTCTA	NA	False	NA	8	True	AATAAA	-11	NA	77384136	77398590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.15	chr11	+	4529	15	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-251	-20	intron_retention	FALSE	canonical	3	379	junction_11	43.1374168755372	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384136	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394845_77395197_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.19	chr11	+	3859	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-243	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	137.408656528215	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384144	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391721_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397223
ES.5553.2	chr11	+	5498	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-302	-1720	-293	1720	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGTTTTTTGTTGTTT	NA	False	NA	NA	False	NA	NA	NA	77384094	77400332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.20	chr11	+	6371	14	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-243	-4	intron_retention	FALSE	canonical	3	379	junction_12	41.1163740256574	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTTGGAGGTGGGGCT	NA	False	NA	26	True	AATAAA	-29	NA	77384144	77398608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396889_77397004
ES.5553.22	chr11	+	3697	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-238	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	104.779662997061	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384149	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396574_77396705_77396889_77397004_77397069_77397221
ES.5553.23	chr11	+	3377	15	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-238	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	118.240523631162	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384149	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77394812_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.24	chr11	+	3676	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-236	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.760175851535	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384151	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384436_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.25	chr11	+	3963	15	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-235	-20	intron_retention	FALSE	canonical	0	0	junction_2	116.90254095456	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384152	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77396078_77396148_77396203_77396329_77396417_77396505_77396889_77397004_77397069_77397221
ES.5553.26	chr11	+	5442	19	NIC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	-234	-18	intron_retention	FALSE	canonical	3	75	junction_7	88.8766658262733	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCTGATGTCTAGAGG	NA	False	NA	12	True	AATAAA	-15	NA	77384153	77398594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.28	chr11	+	6476	12	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-234	-4	intron_retention	FALSE	canonical	3	379	junction_9	47.7128116620077	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTTGGAGGTGGGGCT	NA	False	NA	26	True	AATAAA	-29	NA	77384153	77398608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77393893_77394181_77394255_77394746_77394845_77395197_77396203_77396329_77396417_77396505_77396889_77397004_77397069_77397221
ES.5553.29	chr11	+	3925	17	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-233	-17	intron_retention	FALSE	canonical	3	393	junction_8	39.0440456407888	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGATGTCTAGAGGT	NA	False	NA	13	True	AATAAA	-16	NA	77384154	77398595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.3	chr11	+	3834	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-301	-57	-292	57	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACCATGTCCTCTCTC	NA	False	NA	87	True	GGGGCT	-42	NA	77384095	77398669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.31	chr11	+	3580	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-228	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	106.599921447415	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384159	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.33	chr11	+	3718	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-213	-18	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	103.713399017689	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCTGATGTCTAGAGG	NA	False	NA	12	True	AATAAA	-15	NA	77384174	77398594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390526_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.34	chr11	+	3750	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-211	-17	intron_retention	FALSE	canonical	3	379	junction_14	39.6468842726128	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGATGTCTAGAGGT	NA	False	NA	13	True	AATAAA	-16	NA	77384176	77398595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.35	chr11	+	3667	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-210	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	104.764580292915	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTGATGTCTAGAGGT	NA	False	NA	13	True	AATAAA	-16	NA	77384177	77398595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390660_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.37	chr11	+	3101	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-216	591	-207	-591	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGAGTGTCCCTGCGTTC	NA	False	NA	NA	False	NA	NA	NA	77384180	77398021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.38	chr11	+	3833	19	NIC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	-206	-20	intron_retention	FALSE	canonical	3	24	junction_7	124.033398528853	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384181	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.39	chr11	+	3710	17	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-205	-20	intron_retention	FALSE	canonical	1	1	junction_5	110.211001464237	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384182	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.4	chr11	+	3803	19	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-282	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	102.898142732402	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTCTGATGTCTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	77384105	77398593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397124_77397221
ES.5553.40	chr11	+	2696	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-214	994	-205	753	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCTCTGTCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	77384182	77397618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.41	chr11	+	3777	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-203	-20	intron_retention	FALSE	canonical	3	379	junction_14	39.3094369574284	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384184	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.42	chr11	+	3721	17	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-194	-16	intron_retention	FALSE	canonical	1	1	junction_5	108.52532466549	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTCTAGAGGTT	NA	False	NA	14	True	AATAAA	-17	NA	77384193	77398596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004
ES.5553.43	chr11	+	4047	17	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-179	-14	intron_retention	FALSE	canonical	1	1	junction_5	110.591855910596	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGTCTAGAGGTTGG	NA	False	NA	16	True	AATAAA	-19	NA	77384208	77398598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391897_77391941_77393843_77393893_77394181_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.44	chr11	+	3918	18	NNC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-170	-16	intron_retention	FALSE	canonical	0	0	junction_6	107.817351640999	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTCTAGAGGTT	NA	False	NA	14	True	AATAAA	-17	NA	77384217	77398596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391721_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396889_77397004_77397069_77397221
ES.5553.45	chr11	+	3265	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	-160	371	-151	-371	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCACTTCCCTCCAT	NA	False	NA	NA	False	TATAAA	-8	NA	77384236	77398241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.46	chr11	+	6092	15	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-146	-22	intron_retention	FALSE	canonical	3	379	junction_11	42.8180774335098	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACTTCTGATGTCTA	NA	False	NA	8	True	AATAAA	-11	NA	77384241	77398590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77393893_77394181_77394255_77394746_77394845_77395197_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.47	chr11	+	3715	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-124	-20	intron_retention	FALSE	canonical	3	379	junction_15	39.275797067585	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77384263	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396889_77397004_77397069_77397221
ES.5553.48	chr11	+	3492	19	NNC	ENSMUSG00000011877.14	novel	708	8	NA	NA	237	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.760175851535	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACTTCTGATGTCTAG	NA	False	NA	9	True	AATAAA	-12	NA	77384633	77398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77384735_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.49	chr11	+	3417	19	NNC	ENSMUSG00000011877.14	novel	708	8	NA	NA	-555	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.660257963105	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77389361	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77389385_77389790_77389925_77390342_77390456_77390564_77390673_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.50	chr11	+	3797	18	ISM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	4989	20	-531	-20	3prime_fragment	FALSE	canonical	3	379	junction_14	38.8997469325789	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77389385	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.51	chr11	+	3099	16	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-54	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	113.473638642051	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACTTCTGATGTCTA	NA	False	NA	8	True	AATAAA	-11	NA	77389862	77398590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77389925_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.52	chr11	+	4485	5	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-516	-16	intron_retention	FALSE	canonical	1	1	junction_1	202.443047546711	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTCTAGAGGTT	NA	False	NA	14	True	AATAAA	-17	NA	77391297	77398596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77391392_77391897_77391941_77393843_77393893_77394181_77396889_77397004
ES.5553.53	chr11	+	3383	12	ISM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	8747	20	-161	-20	3prime_fragment	FALSE	canonical	3	379	junction_8	44.5653017010149	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77393143	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.54	chr11	+	3057	12	NIC	ENSMUSG00000011877.14	novel	3512	20	NA	NA	138	-20	intron_retention	FALSE	canonical	3	75	junction_1	110.959749980353	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77393442	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.55	chr11	+	2982	7	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-1260	-20	intron_retention	FALSE	canonical	3	379	junction_4	53.9364337798569	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTTCTGATGTCTAGA	NA	False	NA	10	True	AATAAA	-13	NA	77394701	77398592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77394845_77395197_77396078_77396148_77396203_77396329_77396417_77396505_77396889_77397004_77397069_77397221
ES.5553.56	chr11	+	1820	5	ISM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	11932	-20	367	20	3prime_fragment	FALSE	canonical	3	379	junction_1	63.1916727108881	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATTCAGTTCTTGGTT	NA	False	NA	50	True	GGGGCT	-5	NA	77396328	77398632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.8	chr11	+	4315	16	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-273	-23	intron_retention	FALSE	canonical	3	379	junction_12	41.3664383555343	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCCACTTCTGATGTCT	NA	False	NA	7	True	AATAAA	-10	NA	77384114	77398589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5553.9	chr11	+	3785	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	-273	0	-273	0	multi-exon	FALSE	canonical	3	24	junction_7	121.3660245347	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	False	NA	30	True	AATAAA	-33	NA	77384114	77398612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ES.5554.1	chr11	-	3803	14	NNC	ENSMUSG00000037907.17	novel	3336	16	NA	NA	-363	0	intron_retention	FALSE	non_canonical	0	0	junction_13	1.77090222049559	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTCTACTTAACTT	5441	False	NA	-1	True	AATAAA	-16	NA	77380867	77361312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77363205_77363274_77363439_77363550_77363704_77363836_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264_77380519_77380783
ES.5554.2	chr11	-	3949	14	NIC	ENSMUSG00000037907.17	novel	3336	16	NA	NA	-356	0	intron_retention	FALSE	canonical	1	1	junction_8	1.51129866956835	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTCTACTTAACTT	5448	False	NA	-1	True	AATAAA	-16	NA	77380860	77361312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264
ES.5554.3	chr11	-	6918	10	NNC	ENSMUSG00000037907.17	novel	3336	16	NA	NA	-4024	0	intron_retention	FALSE	canonical	0	0	junction_3	1.9436506316151	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTCTACTTAACTT	NA	False	NA	-1	True	AATAAA	-16	NA	77371615	77361312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77363704_77363836_77364238_77364405_77364731_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468
ES.5554.4	chr11	-	3116	15	FSM	ENSMUSG00000037907.17	ENSMUST00000037593.14	3105	15	-13	2	-1	0	multi-exon	FALSE	canonical	1	1	junction_1	1.63038745864476	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATTTCTACTTAACTT	5803	False	NA	-1	True	AATAAA	-16	NA	77380505	77361312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77362650_77363127_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264
ES.5554.5	chr11	-	4500	13	NIC	ENSMUSG00000037907.17	novel	3336	16	NA	NA	-363	-1	intron_retention	FALSE	canonical	1	1	junction_8	1.55232800084976	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCATTTCTACTTAACT	5441	False	NA	-2	True	AATAAA	-15	NA	77380867	77361313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77368163_77368245_77368371_77368468_77368605_77380264
ES.5555.1	chr11	-	178	1	Intergenic	novelGene_4369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77387734	77387556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77387600_77387700
ES.5556.1	chr11	-	1687	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	52	-4	intron_retention	FALSE	canonical	0	0	junction_2	87.3315521446859	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGTCGTTGGGAGATTGT	NA	False	NA	-3	True	ATTAAA	-17	NA	77404144	77398928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399909_77400194_77400423_77400553_77403478_77403521_77403722
ES.5556.10	chr11	-	4671	4	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	91	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	87.3053390247253	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404105	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399818_77399901_77401871_77402086_77403521_77403722
ES.5556.11	chr11	-	1311	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	102	-8	combination_of_known_splicesites	TRUE	canonical	1	7	junction_4	68.4707236707777	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404094	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403722_77403792_77403985
ES.5556.12	chr11	-	1495	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	72.6129465040498	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404118	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403493_77403723_77403985
ES.5556.13	chr11	-	4166	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	73.0106841496503	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404118	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399818_77399901_77400100_77400423_77401871_77402086_77403521_77403722_77403792_77403985
ES.5556.15	chr11	-	1723	5	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	13	-8	intron_retention	FALSE	canonical	3	179	junction_4	7.43303437365925	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404183	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
ES.5556.16	chr11	-	4078	7	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	76	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	77.7703171024924	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCGGAGTCGTTGGGAG	NA	False	NA	-8	True	ATTAAA	-12	NA	77404120	77398933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399911_77400100_77400423_77401871_77402086_77403521_77403722_77403792_77403985
ES.5556.17	chr11	-	1654	5	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	26	junction_4	78.5923024220566	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCGGAGTCGTTGGGA	NA	False	NA	-9	True	ATTAAA	-11	NA	77404200	77398934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403493_77403723_77403985
ES.5556.19	chr11	-	1507	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	79	-10	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	63.3782297007419	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCGGAGTCGTTGGGA	NA	False	NA	-9	True	ATTAAA	-11	NA	77404117	77398934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403723_77403985
ES.5556.2	chr11	-	1506	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	31	-5	intron_retention	FALSE	canonical	3	179	junction_5	7.1386273190299	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTCGTTGGGAGATTG	NA	False	NA	-4	True	ATTAAA	-16	NA	77404165	77398929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
ES.5556.20	chr11	-	1697	4	NIC	ENSMUSG00000044328.14	novel	913	4	NA	NA	81	-10	intron_retention	FALSE	canonical	1	1	junction_2	87.7154490383536	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCGGAGTCGTTGGGA	NA	False	NA	-9	True	ATTAAA	-11	NA	77404115	77398934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77399818_77399901_77400194_77400423_77400553_77403722
ES.5556.21	chr11	-	5261	1	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	0	-11	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCGGAGTCGTTGGG	NA	False	NA	-10	True	ATTAAA	-10	NA	77404196	77398935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77398900_77404200
ES.5556.3	chr11	-	1477	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	-19	5	-19	-5	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTCGTTGGGAGATTG	NA	False	NA	-4	True	ATTAAA	-16	NA	77404215	77398929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
ES.5556.4	chr11	-	4565	4	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	77	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	87.3053390247253	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	-5	True	ATTAAA	-15	NA	77404119	77398930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399818_77399901_77400100_77400423_77401871_77402086
ES.5556.5	chr11	-	4486	5	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	77	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	76.6208196249557	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGAGTCGTTGGGAGATT	NA	False	NA	-5	True	ATTAAA	-15	NA	77404119	77398930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77401871_77402086
ES.5556.6	chr11	-	1605	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	78	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	83.2091341139902	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404118	77398931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77399204_77399282_77399818_77399901_77400194_77400423_77400553_77403478_77403723_77403985
ES.5556.7	chr11	-	1644	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	14	-7	intron_retention	FALSE	canonical	3	152	junction_1	15.3179633110933	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGAGTCGTTGGGAGAT	NA	False	NA	-6	True	ATTAAA	-14	NA	77404182	77398931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
ES.5556.8	chr11	-	4700	4	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	77	8	77	-8	intron_retention	FALSE	canonical	3	152	junction_1	16.0831174424198	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	False	NA	-7	True	ATTAAA	-13	NA	77404119	77398932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423
ES.5557.1	chr11	+	1836	2	FSM	ENSMUSG00000000686.12	ENSMUST00000094004.5	2662	2	-21	847	-21	-847	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAGGACAGGATGTTT	NA	False	NA	NA	False	CATAAA	-44	NA	77405925	77410024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77406879_77409141
ES.5558.1	chr11	+	158	2	Antisense	novelGene_ENSMUSG00000081543.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	32	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77480905	77543396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77480928_77543260
ES.5558.10	chr11	+	166	1	Intergenic	novelGene_4380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9721	False	NA	NA	False	NA	NA	NA	77530906	77531072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77530900_77531100
ES.5558.11	chr11	+	215	1	Intergenic	novelGene_4382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGTGACAGATTATGA	NA	False	NA	NA	False	NA	NA	NA	77543236	77543451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77543200_77543500
ES.5558.2	chr11	+	156	1	Intergenic	novelGene_4372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	77489811	77489967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77489800_77490000
ES.5558.3	chr11	+	178	1	Intergenic	novelGene_4373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77490151	77490329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77490200_77490300
ES.5558.4	chr11	+	174	1	Intergenic	novelGene_4374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	77491863	77492037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77491900_77492000
ES.5558.5	chr11	+	177	1	Intergenic	novelGene_4375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTCTGAATAACT	4488	False	NA	NA	False	NA	NA	NA	77511809	77511986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77511800_77512000
ES.5558.6	chr11	+	133	1	Intergenic	novelGene_4376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5385	False	NA	NA	False	NA	NA	NA	77512706	77512839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77512700_77512800
ES.5558.7	chr11	+	184	1	Intergenic	novelGene_4377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAAAGAAAGAAAGGAA	284	False	NA	NA	False	NA	NA	NA	77513808	77513992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77513800_77514000
ES.5558.8	chr11	+	286	1	Intergenic	novelGene_4378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCAGTTGTTC	1288	False	NA	NA	False	NA	NA	NA	77522473	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77522500_77522800
ES.5558.9	chr11	+	200	1	Intergenic	novelGene_4379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAAGAGAAAGAA	5958	False	NA	NA	False	NA	NA	NA	77527143	77527343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77527100_77527300
ES.5559.1	chr11	-	12454	20	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-39	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.5606586238085	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTCACTTTATTTTTTA	8112	False	NA	4	True	AATAAA	-21	NA	77498680	77419985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469547_77469654_77470599_77470672_77476098_77476321_77498033
ES.5559.10	chr11	-	8880	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	62	-3530	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGCCATGTACTATG	8213	False	NA	NA	False	AATAAA	-16	NA	77498579	77423517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.12	chr11	-	8727	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-43	-3762	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	15.5550634842806	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACTCTTTTGTGCATT	8108	False	NA	-2	True	ATTAAA	-21	NA	77498684	77423749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454546_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.13	chr11	-	3828	23	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-66	-3764	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7067341764389	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGAACTCTTTTGTGCA	8085	False	NA	-4	True	ATTAAA	-19	NA	77498707	77423751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77424010_77429042_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
ES.5559.14	chr11	-	8716	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-73	3766	-73	-3766	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAGAACTCTTTTGTG	8078	False	NA	-6	True	ATTAAA	-17	NA	77498714	77423753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ES.5559.15	chr11	-	8732	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-26	-3766	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGAGAACTCTTTTGTG	8125	False	NA	-6	True	ATTAAA	-17	NA	77498667	77423753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.16	chr11	-	8430	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-34	-4076	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTTTTATTTTATC	8117	False	NA	NA	False	AATACA	-21	NA	77498675	77424063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.17	chr11	-	8288	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-26	-4210	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAGGTATACTAAGTA	8125	False	NA	NA	False	ATTAAA	-15	NA	77498667	77424197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.18	chr11	-	7359	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-7	-5207	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGCACATTTTGGG	8144	False	NA	NA	False	AATAAA	-38	NA	77498648	77425194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
ES.5559.19	chr11	-	7290	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-46	-5228	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGGCGTTTTAAAACT	8105	False	NA	NA	False	AATAAA	-17	NA	77498687	77425215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.21	chr11	-	7235	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-56	5230	-56	-5230	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTACTGGCGTTTTAAAA	8095	False	NA	NA	False	AATAAA	-15	NA	77498697	77425217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ES.5559.22	chr11	-	5802	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-39	-6796	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGATGCTATAGTATAGG	8112	False	NA	NA	False	AAGAAA	-1	NA	77498680	77426783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
ES.5559.23	chr11	-	4420	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-77	-8129	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAGAAAATCATTTAGT	8074	False	NA	NA	False	ATTAAA	-21	NA	77498718	77428116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.24	chr11	-	4200	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	80	8129	80	-8129	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAGAAAATCATTTAGT	8231	False	NA	NA	False	ATTAAA	-21	NA	77498561	77428116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ES.5559.25	chr11	-	4487	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-58	-8130	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTAGAAAATCATTTAG	8093	False	NA	NA	False	ATTAAA	-20	NA	77498699	77428117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
ES.5559.26	chr11	-	4092	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	-53	8370	-53	-8370	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAATCTGAATCATCACTT	8098	False	NA	NA	False	TATAAA	-16	NA	77498694	77428357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ES.5559.27	chr11	-	4090	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-42	-8424	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTAATTAGAAGGGGT	8109	False	NA	NA	False	AATAGA	-34	NA	77498683	77428411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.28	chr11	-	4465	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-50	-8459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	18.7173752447939	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGTATTTCATGTATGT	8101	False	NA	NA	False	TTTAAA	-10	NA	77498691	77428446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77494361_77494764_77498033
ES.5559.29	chr11	-	3409	20	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-22	-10810	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_18	10.3634773145823	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGGTATTGAGTGGG	8129	False	NA	NA	False	AATATA	-13	NA	77498663	77430797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.3	chr11	-	7544	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3534325529004	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGCTCACTTTAT	8145	False	NA	-2	True	AATAAA	-15	NA	77498647	77419991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77423653_77428582_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.30	chr11	-	6578	1	NIC	ENSMUSG00000017291.14	novel	11813	19	NA	NA	30170	-19597	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTCAGTTACTTCC	NA	False	NA	NA	False	AAGAAA	-10	NA	77446162	77439584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77439600_77446200
ES.5559.31	chr11	-	994	3	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	31656	19627	31656	-19627	internal_fragment	FALSE	canonical	3	53	junction_1	1	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	77444676	77439614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_77440302_77441697_77441827_77444498
ES.5559.32	chr11	-	189	1	Intergenic	novelGene_4370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTAGAGAATACAAATGT	NA	False	NA	NA	False	NA	NA	NA	77455229	77455040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77455000_77455200
ES.5559.33	chr11	-	177	1	Intergenic	novelGene_4371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAAT	3467	False	NA	NA	False	NA	NA	NA	77486565	77486388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77486400_77486600
ES.5559.4	chr11	-	12505	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGCTCACTTTAT	8114	False	NA	-2	True	AATAAA	-15	NA	77498678	77419991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
ES.5559.7	chr11	-	12588	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTGTCTGCTCACTT	8115	False	NA	-5	True	AATAAA	-12	NA	77498677	77419994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
ES.5559.8	chr11	-	7249	1	ISM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	48219	877	48219	-877	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAACCTTATCATTTCT	NA	False	NA	79	True	TTTAAA	-29	NA	77428113	77420864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_77420900_77428100
ES.556.1	chr1	-	6698	1	Genic_Genomic	ENSMUSG00000026021.16	novel	NA	NA	NA	NA	77873	389	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCAGGTTGCCTCGGAT	NA	False	NA	NA	False	ATTAAA	-23	NA	59632025	59625327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_59625300_59632000
ES.556.2	chr1	-	198	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGCGTGGTAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	59626354	59626156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59626200_59626400
ES.556.3	chr1	-	177	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATGTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	59626651	59626474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59626500_59626700
ES.5560.1	chr11	-	155	1	Intergenic	novelGene_4381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAAATAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	77533750	77533595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77533600_77533800
ES.5561.1	chr11	-	176	1	Intergenic	novelGene_4383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAACAAAAAA	7485	False	NA	NA	False	NA	NA	NA	77546348	77546172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77546200_77546300
ES.5562.1	chr11	+	183	2	Intergenic	novelGene_4384	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	554	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	77554180	77648354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77554253_77648243
ES.5562.10	chr11	+	3217	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-17	1958	-17	-1958	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTTTTTTTAGCC	NA	False	NA	NA	False	AAAAAG	-20	NA	77576963	77601609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.11	chr11	+	9491	43	Fusion	ENSMUSG00000000631.21_ENSMUSG00000037857.17	novel	6202	42	NA	NA	-17	8	multi-exon	FALSE	canonical	0	0	junction_3	28.7077403106113	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCTCCTTGCAGG	NA	False	NA	27	True	AATAAA	-28	NA	77576963	77756814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_77577334_77582367_77584081_77596334_77596368_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.12	chr11	+	10401	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-17	-5226	-17	5226	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGGTGTTTGTGGGTTTT	NA	False	NA	13	True	AATAAA	-16	NA	77576963	77608793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.14	chr11	+	5175	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-16	-1	-16	1	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTCTGATTTTTTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	77576964	77603568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.15	chr11	+	2796	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-16	2378	-16	-2378	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAAGAGTTCTGCAGCC	NA	False	NA	NA	False	AATACA	-15	NA	77576964	77601189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.16	chr11	+	2515	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-14	2657	-14	-2657	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTCCTGCTGTCATCT	NA	False	NA	NA	False	AATACA	-20	NA	77576966	77600910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.17	chr11	+	4671	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-14	501	-14	-501	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAAAGAAAATTCTA	NA	False	NA	NA	False	AATATA	-42	NA	77576966	77603066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.18	chr11	+	8999	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-14	-3827	-14	3827	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGTCATTACCAAAA	NA	False	NA	22	True	AATAAA	-27	NA	77576966	77607394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.19	chr11	+	4485	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-12	-730	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACGAGGCTCCAG	NA	False	NA	76	True	AATAAA	-35	NA	77576968	77602837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.2	chr11	+	257	1	Intergenic	novelGene_4385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCTGAAGTCTCT	NA	False	NA	NA	False	NA	NA	NA	77554182	77554439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77554200_77554400
ES.5562.20	chr11	+	5128	5	NNC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.6119820120058	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTTTTCTGATTTT	NA	False	NA	13	True	ATTAAA	-14	NA	77576970	77603563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508_77601907_77601942
ES.5562.21	chr11	+	8798	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	13	-3653	-4	3653	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCCCTATTGTGACTTG	NA	False	NA	NA	False	AATAAA	-45	NA	77576993	77607220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.22	chr11	+	3062	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	14	2082	-3	-2082	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTAAGTGTATACTCT	NA	False	NA	NA	False	AATATA	-44	NA	77576994	77601485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.23	chr11	+	3077	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	0	-2109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCTCTGACTTGCTCT	NA	False	NA	NA	False	AATATA	-17	NA	77576997	77601458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.24	chr11	+	3201	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	1	-1984	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	77576998	77601583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.25	chr11	+	3353	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	2	-1831	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGGGTTCCTTTGGTT	NA	False	NA	20	True	AATATA	-16	NA	77576999	77601736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.26	chr11	+	4334	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	19	805	2	-805	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTTTGTGTTC	NA	False	NA	1	True	TTTAAA	-43	NA	77576999	77602762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.27	chr11	+	9126	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	19	-3987	2	3987	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTTGTATCTGTTAA	NA	False	NA	10	True	AATAAA	-18	NA	77576999	77607554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.28	chr11	+	3049	5	NIC	ENSMUSG00000037857.17	novel	777	3	NA	NA	181	-1831	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.287647321872	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGGGTTCCTTTGGTT	NA	False	NA	20	True	AATATA	-16	NA	77578607	77601736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77578638_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.29	chr11	+	3639	3	ISM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	4644	1909	3198	-1909	3prime_fragment	FALSE	canonical	3	202	junction_1	3	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTGTTTTCAGGCAAA	NA	False	NA	-58	True	AATAAA	-13	NA	77581624	77601658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77584081_77596334_77596368_77600508
ES.5562.3	chr11	+	191	1	Intergenic	novelGene_4386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAATTTATTAAATATA	NA	False	NA	NA	False	NA	NA	NA	77564836	77565027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77564800_77565000
ES.5562.30	chr11	+	188	1	Intergenic	novelGene_4391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	77587367	77587555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77587400_77587600
ES.5562.31	chr11	+	2959	1	Genic_Genomic	ENSMUSG00000037857.17	novel	NA	NA	NA	NA	22848	666	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTAGCCTGCCCTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	77601274	77604233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_77601300_77604200
ES.5562.32	chr11	+	3062	1	Intergenic	novelGene_4392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGATGTCCACATTA	NA	False	NA	NA	False	ATTAAA	-26	NA	77603973	77607035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77604000_77607000
ES.5562.33	chr11	+	181	1	Intergenic	novelGene_4394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGGAATGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77629088	77629269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77629100_77629300
ES.5562.34	chr11	+	7511	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	26.2390453332434	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTCCCTGCCTCTCC	NA	False	NA	20	True	AATAAA	-21	NA	77654071	77756807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714092_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.35	chr11	+	7489	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	15	3	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCCCTGCCTCTCCTT	NA	False	NA	22	True	AATAAA	-23	NA	77654086	77756809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.36	chr11	+	7483	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.2902365274707	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	NA	False	NA	17	True	AATAAA	-18	NA	77654089	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668067_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714092_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.37	chr11	+	7496	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	26.2390453332434	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654090	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712027_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.38	chr11	+	1546	2	FSM	ENSMUSG00000000631.21	ENSMUST00000100795.4	3040	2	-31	1525	24	1264	multi-exon	FALSE	canonical	3	95	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGTTAAGATCAGCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	77654095	77669496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77654206_77668060
ES.5562.39	chr11	+	7801	40	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	-5	6	intron_retention	FALSE	canonical	0	0	junction_8	26.4738591869383	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTGCCTCTCCTTGCA	NA	False	NA	25	True	AATAAA	-26	NA	77654121	77756812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711628_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.4	chr11	+	153	1	Intergenic	novelGene_4387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	77565324	77565477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77565300_77565500
ES.5562.40	chr11	+	2469	3	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	-5	-2578	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	47.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77654121	77704139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77654206_77668060_77669141_77702834
ES.5562.41	chr11	+	3033	2	FSM	ENSMUSG00000000631.21	ENSMUST00000100795.4	3040	2	-4	11	-4	-11	multi-exon	FALSE	canonical	3	95	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGCAGAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	77654122	77671010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77654206_77668060
ES.5562.42	chr11	+	7502	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	25.5438838080665	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654122	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654258_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.43	chr11	+	6765	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	5	109	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGCATCCCTGAGAG	NA	False	NA	NA	False	TTTAAA	-15	NA	77654131	77756130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.44	chr11	+	7499	42	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	31.819445264902	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654133	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77700624_77700685_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.45	chr11	+	7449	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	26.1744030495444	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654136	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744564_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.46	chr11	+	6235	41	NNC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	11	5237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	25.6367777811487	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGGGGAAAAGTGATG	NA	False	NA	NA	False	AATAAA	-15	NA	77654137	77749517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77749427
ES.5562.49	chr11	+	8698	42	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	59	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_40	31.4419287575941	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	NA	False	NA	17	True	AATAAA	-18	NA	77654185	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77749844_77751158_77755516
ES.5562.5	chr11	+	349	1	Intergenic	novelGene_4388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	77570131	77570480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77570100_77570500
ES.5562.50	chr11	+	7559	41	NNC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	472	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.0153800664146	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCTCCTTGCAGG	NA	False	NA	27	True	AATAAA	-28	NA	77654598	77756814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77654783_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.51	chr11	+	7494	41	NIC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	24.9639615245658	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77656415	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77656543_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.52	chr11	+	7515	42	NIC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	36.1351155998845	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77656430	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77656543_77668060_77669141_77706681_77706718_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.53	chr11	+	7631	42	NIC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	2	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	36.214395631048	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCTCTCCTTGCAGG	NA	False	NA	27	True	AATAAA	-28	NA	77656430	77756814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77656543_77668060_77669141_77706681_77706826_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.54	chr11	+	7456	41	NNC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	31.4680790643471	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77656462	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77656543_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714092_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.55	chr11	+	7683	41	NNC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	-252	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.0153800664146	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTTCCCTGCCTCTCCT	NA	False	NA	21	True	AATAAA	-22	NA	77657309	77756808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77657624_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.56	chr11	+	7518	41	NIC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.0153800664146	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	NA	False	NA	17	True	AATAAA	-18	NA	77657559	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77657713_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.57	chr11	+	6173	40	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	970	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_16	17.1184910270367	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGGGGCCCCAAGGCAG	NA	False	NA	NA	False	CATAAA	-23	NA	77669111	77756663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.58	chr11	+	6134	39	NNC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	977	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.1765562352523	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	NA	False	NA	17	True	AATAAA	-18	NA	77669118	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77669141_77706681_77706826_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733017_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.59	chr11	+	2925	2	Antisense	novelGene_ENSMUSG00000069804.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	77676591	77679666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77679011_77679160
ES.5562.6	chr11	+	5610	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-408	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTTTCTGATTTTTTG	NA	False	NA	16	True	ATTAAA	-17	NA	77576572	77603566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
ES.5562.60	chr11	+	6363	40	NIC	ENSMUSG00000000631.21	novel	5381	41	NA	NA	5	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.2416575140773	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	4866	False	NA	17	True	AATAAA	-18	NA	77692128	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77692207_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.61	chr11	+	7449	2	NNC	ENSMUSG00000000631.21	novel	1076	6	NA	NA	365	3620	intron_retention	FALSE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9127	False	NA	NA	False	NA	NA	NA	77702705	77710337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77703991_77704173
ES.5562.62	chr11	+	6372	41	NIC	ENSMUSG00000000631.21	novel	2014	5	NA	NA	3146	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	32.2398821337796	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	NA	False	NA	17	True	AATAAA	-18	NA	77705486	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77705538_77706681_77706718_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.63	chr11	+	5314	32	NNC	ENSMUSG00000000631.21	novel	2014	5	NA	NA	-2703	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.957043010701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	1116	False	NA	17	True	AATAAA	-18	NA	77712676	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77712745_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.64	chr11	+	5486	32	NNC	ENSMUSG00000000631.21	novel	2014	5	NA	NA	-2688	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.957043010701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	1131	False	NA	19	True	AATAAA	-20	NA	77712691	77756806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77712930_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.65	chr11	+	8059	32	NNC	ENSMUSG00000000631.21	novel	2014	5	NA	NA	-2654	-1922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.0136884188305	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTATTAAGTGTGTTT	1165	False	NA	NA	False	NA	NA	NA	77712725	77753741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77712930_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77749844
ES.5562.66	chr11	+	2861	18	NNC	ENSMUSG00000000631.21	novel	3807	2	NA	NA	-2654	-873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3717452013281	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTAATGGCACAG	1165	False	NA	NA	False	ATTAAA	-20	NA	77712725	77734831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77712930_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342
ES.5562.67	chr11	+	3830	22	NNC	ENSMUSG00000000631.21	novel	5381	41	NA	NA	-1637	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.4339901772949	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAAGTTTCCCTGCCTC	4651	False	NA	17	True	AATAAA	-18	NA	77727275	77756804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733399_77733937_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ES.5562.68	chr11	+	137	1	ISM	ENSMUSG00000000631.21	ENSMUST00000100443.3	3807	2	3808	1	3808	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77735566	77735703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77735600_77735700
ES.5562.69	chr11	+	4833	5	NIC	ENSMUSG00000000631.21	novel	5381	41	NA	NA	176	-3	intron_retention	FALSE	canonical	3	124	junction_1	13.6633634219397	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACAAGTTTCCCTGCCT	NA	False	NA	16	True	AATAAA	-17	NA	77741657	77756803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77741710_77744042_77744229_77744577_77744718_77745503_77748672_77755516
ES.5562.7	chr11	+	4525	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-57	690	-57	-690	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTGTGTGTTTAATT	NA	False	NA	116	True	ATTAAA	-38	NA	77576923	77602877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5562.8	chr11	+	5888	5	NNC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	-36	29641	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.6119820120058	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	77576944	77662388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508_77604238_77662364
ES.5562.9	chr11	+	3346	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	-17	1829	-17	-1829	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTCCTTTGGTTAT	NA	False	NA	22	True	AATATA	-18	NA	77576963	77601738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ES.5563.1	chr11	-	177	1	Intergenic	novelGene_4389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATTAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	77572593	77572416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77572400_77572600
ES.5564.1	chr11	-	157	1	Intergenic	novelGene_4390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	77573683	77573526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77573500_77573700
ES.5565.1	chr11	-	1095	2	Antisense	novelGene_ENSMUSG00000037857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACAGAGATGGCTGGAC	NA	False	NA	NA	False	AATAAA	-2	NA	77590264	77588187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_77588264_77589245
ES.5566.1	chr11	-	3381	2	Antisense	novelGene_ENSMUSG00000037857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAGGCATTAGATCC	NA	False	NA	NA	False	AAAACA	-11	NA	77595068	77591341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_77593282_77593627
ES.5567.1	chr11	-	2871	1	Intergenic	novelGene_4393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-33	NA	77608892	77606021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77606000_77608900
ES.5568.1	chr11	-	2815	3	Antisense	novelGene_ENSMUSG00000037857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCCGCTTTCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	77630182	77617654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_77620174_77629627_77629711_77629969
ES.5569.1	chr11	-	147	1	Intergenic	novelGene_4395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77647499	77647352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77647400_77647500
ES.557.1	chr1	+	167	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	59640221	59640388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59640200_59640400
ES.5570.1	chr11	-	264	1	Intergenic	novelGene_4396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTAATTTTCTGTATT	NA	False	NA	NA	False	TATAAA	-13	NA	77666017	77665753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77665800_77666000
ES.5571.1	chr11	-	145	1	Intergenic	novelGene_4397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	77673903	77673758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77673800_77673900
ES.5572.1	chr11	-	210	1	Intergenic	novelGene_4398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGTGGGACAAAAAGAGA	5647	False	NA	NA	False	AAAAAG	-4	NA	77680346	77680136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77680100_77680300
ES.5573.1	chr11	-	178	1	Intergenic	novelGene_4399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAGAAG	798	False	NA	NA	False	NA	NA	NA	77724489	77724311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77724300_77724500
ES.5574.1	chr11	+	2138	1	Intergenic	novelGene_4400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATTTCTTACGCCTGTG	4613	False	NA	NA	False	AATAAA	-11	NA	77775496	77777634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77775500_77777600
ES.5575.1	chr11	-	2774	6	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	104	-1	intron_retention	FALSE	canonical	3	232	junction_1	26.8223787162884	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCGGTGGTCTTTATT	NA	False	NA	-3	True	AATAAA	-21	NA	77784818	77771441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.10	chr11	-	1555	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	99.5601437434791	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77775379	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77775238
ES.5575.11	chr11	-	2013	7	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	278	-5	intron_retention	FALSE	canonical	2	8	junction_2	101.894417031662	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784644	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772361_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.12	chr11	-	1796	8	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	155	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	94.5053718373852	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784767	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772361_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.13	chr11	-	2117	7	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	265	-5	intron_retention	FALSE	canonical	2	5	junction_1	103.424153637125	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784657	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772130_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.14	chr11	-	908	4	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	53	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	112.553197298976	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77773459	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772403_77772943_77773103_77773421
ES.5575.15	chr11	-	2042	7	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	265	-5	intron_retention	FALSE	canonical	0	0	junction_6	104.831611008639	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784657	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783061_77784492
ES.5575.16	chr11	-	2169	7	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	231	-5	intron_retention	FALSE	canonical	1	1	junction_2	104.428603999734	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784691	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772470_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.17	chr11	-	1858	8	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	206	-33	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	96.3251297027152	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAACAAAAACC	NA	False	NA	-35	True	AATAAA	-31	NA	77784716	77771473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772180_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.3	chr11	-	2214	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	121	-3	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784801	77771443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.4	chr11	-	1913	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	82	3	82	-3	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784840	77771443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.5	chr11	-	2355	5	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	307	-3	intron_retention	FALSE	canonical	0	0	junction_3	117.082236056543	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784615	77771443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77782937_77783087_77784492
ES.5575.6	chr11	-	1697	8	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	272	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	97.1970437108169	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCTGCGGTGGTCTTTA	NA	False	NA	-5	True	AATAAA	-19	NA	77784650	77771443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783061_77784492
ES.5575.7	chr11	-	4319	4	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	208	-4	intron_retention	FALSE	canonical	3	286	junction_2	8.04155872120988	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCTGCGGTGGTCTTT	NA	False	NA	-6	True	AATAAA	-18	NA	77784714	77771444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77773590_77773954_77774138_77774604_77774819_77782937
ES.5575.8	chr11	-	2106	7	NNC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	284	-5	intron_retention	FALSE	canonical	2	3	junction_2	103.70417327936	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784638	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77772081_77772326_77772460_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ES.5575.9	chr11	-	4011	5	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	269	-5	intron_retention	FALSE	canonical	3	232	junction_1	27.7353564967173	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCTGCGGTGGTCTT	NA	False	NA	-7	True	AATAAA	-17	NA	77784653	77771445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77774604_77774819_77782937
ES.5576.1	chr11	+	781	1	Intergenic	novelGene_4401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	77796481	77797262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77796500_77797300
ES.5577.1	chr11	-	5856	1	Genic_Genomic	ENSMUSG00000055045.6	novel	NA	NA	NA	NA	14443	3137	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGCTTTATTGATTT	NA	False	NA	NA	False	TTTAAA	-1	NA	77805671	77799815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_77799800_77805700
ES.5578.1	chr11	+	179	1	Intergenic	novelGene_4402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAG	6829	False	NA	NA	False	NA	NA	NA	77809258	77809437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77809300_77809400
ES.5579.1	chr11	+	159	1	Intergenic	novelGene_4403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7064	False	NA	NA	False	NA	NA	NA	77818284	77818443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77818300_77818400
ES.558.1	chr1	+	1809	10	NIC	ENSMUSG00000047361.17	novel	933	5	NA	NA	-45	-100	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.01109879279097	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAACCGTACCTAGGAC	NA	False	NA	NA	False	AATAAA	-28	NA	59645895	59675476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59646114_59646891_59646965_59664245_59664337_59666615_59666767_59667328_59667444_59669153_59669486_59671372_59671576_59672305_59672479_59673152_59673373_59675243
ES.558.2	chr1	+	1661	9	NIC	ENSMUSG00000047361.17	novel	933	5	NA	NA	-14	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	3.23795846174715	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTTTGTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	59658558	59675573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59658605_59664245_59664337_59666615_59666767_59667328_59667444_59669153_59669486_59671372_59671576_59672305_59672479_59673152_59673373_59675243
ES.558.3	chr1	+	183	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGACTTGTCGGGCC	NA	False	NA	NA	False	NA	NA	NA	59663591	59663774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59663600_59663800
ES.558.4	chr1	+	174	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTCAACGAGG	NA	False	NA	NA	False	NA	NA	NA	59670015	59670189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59670000_59670200
ES.5580.1	chr11	+	4117	17	NNC	ENSMUSG00000000632.14	novel	4239	17	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.559016994374947	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATCAAGCAGTGT	NA	False	NA	NA	False	ATTAAA	-12	NA	77821756	77869865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77821941_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864822_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868838
ES.5580.2	chr11	+	4067	16	NIC	ENSMUSG00000000632.14	novel	4239	17	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.596284793999944	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTGTGAATGGTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	77821758	77869874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77821941_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868362_77868481_77868567_77868671_77868838
ES.5580.3	chr11	+	4898	14	NNC	ENSMUSG00000000632.14	novel	3424	16	NA	NA	-3045	-1	intron_retention	FALSE	canonical	0	0	junction_1	0.421325044234743	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAATCAAGCAGTGT	948	False	NA	NA	False	ATTAAA	-12	NA	77839085	77869865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77839224_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868838
ES.5580.4	chr11	+	4010	17	NNC	ENSMUSG00000000632.14	novel	3424	16	NA	NA	-2993	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.559016994374947	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTGTGAATGGTGG	1000	False	NA	NA	False	ATTAAA	-21	NA	77839137	77869874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77839224_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868838
ES.5581.1	chr11	+	3240	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-186	4323	-138	2	5prime_fragment	FALSE	canonical	3	95	junction_1	13.3356664625357	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGGAGTTTGCCATAA	NA	False	NA	NA	False	GATAAA	-16	NA	77873441	77917042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
ES.5581.10	chr11	+	4565	16	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-56	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	42.4638931590383	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873523	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915756_77915849_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.11	chr11	+	3672	16	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-53	-477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9450536406509	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATCTATACAATATCAT	NA	False	NA	18	True	ATTAAA	-26	NA	77873526	77920888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77873716_77874077_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.12	chr11	+	4020	16	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-47	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9450536406509	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873532	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77873629_77874110_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.13	chr11	+	4828	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-40	-478	intron_retention	FALSE	canonical	3	95	junction_1	14.1834973695889	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATCTATACAATATCA	NA	False	NA	17	True	ATTAAA	-25	NA	77873539	77920887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77919136_77919668_77919808_77920142
ES.5581.14	chr11	+	3736	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-83	757	-35	205	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGACTTTTTTTCTTT	NA	False	NA	NA	False	AAGAAA	-15	NA	77873544	77920608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.15	chr11	+	3910	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-31	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.6053552538462	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTTTTCTGCCTGT	NA	False	NA	12	True	TATAAA	-16	NA	77873548	77921359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77873683_77874893_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.16	chr11	+	4527	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-31	-472	intron_retention	FALSE	canonical	3	95	junction_1	14.0704062258681	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77873548	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.17	chr11	+	4359	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-79	465	-31	-465	intron_retention	FALSE	canonical	3	95	junction_1	14.1258083499126	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCATTGTTTTATTTAA	NA	False	NA	30	True	ATTAAA	-38	NA	77873548	77920900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668
ES.5581.18	chr11	+	5147	14	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-28	-472	intron_retention	FALSE	non_canonical	0	0	junction_8	47.5966783187887	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77873551	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77914445_77915995_77916207_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.19	chr11	+	5069	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-28	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	35.0044457817831	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873551	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77916006_77916217_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.2	chr11	+	4125	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-183	468	-135	-468	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATATCATTGTTTTATT	NA	False	NA	27	True	ATTAAA	-35	NA	77873444	77920897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.20	chr11	+	4817	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-75	3	-27	-3	intron_retention	FALSE	canonical	3	95	junction_1	14.1258083499126	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873552	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668
ES.5581.21	chr11	+	3272	11	NIC	ENSMUSG00000037791.16	novel	3047	11	NA	NA	-24	0	intron_retention	FALSE	canonical	3	11	junction_9	35.7161028109171	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGGGAGTTTGCCAT	NA	False	NA	NA	False	GATAAA	-14	NA	77873555	77917040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916710
ES.5581.22	chr11	+	4159	15	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-23	-470	intron_retention	FALSE	canonical	3	11	junction_9	32.5263629339999	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAATATCATTGTTTTA	NA	False	NA	25	True	ATTAAA	-33	NA	77873556	77920895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.23	chr11	+	3942	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-20	-463	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36.0494400813316	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATTGTTTTATTTAATA	NA	False	NA	32	True	ATTAAA	-40	NA	77873559	77920902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.24	chr11	+	3784	12	NNC	ENSMUSG00000037791.16	novel	3047	11	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	54.502710524757	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATAAACAACTTTTTGG	NA	False	NA	NA	False	AATAAA	-33	NA	77873561	77917018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77897891_77897995_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915995_77916207
ES.5581.25	chr11	+	6280	8	NNC	ENSMUSG00000037791.16	novel	3047	11	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	2	junction_3	56.9862138716775	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGATAAACAACTTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	77873565	77917016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77875024_77897552_77897626_77897891_77897995_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183
ES.5581.26	chr11	+	3894	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6053552538462	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873565	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77873629_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.27	chr11	+	4395	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36.0494400813316	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTCTGCCTGTCTGTC	NA	False	NA	17	True	TATAAA	-21	NA	77873568	77921364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.28	chr11	+	4447	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-4	-472	intron_retention	FALSE	canonical	1	1	junction_9	36.071428152959	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77873575	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77914646_77915786_77915913_77916763_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.29	chr11	+	4191	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-50	269	-2	-269	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACATCTAGTGATGGC	NA	False	NA	NA	False	NA	NA	NA	77873577	77921096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.3	chr11	+	4577	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-167	0	-119	0	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGCCTGTCTGTCC	NA	False	NA	18	True	TATAAA	-22	NA	77873460	77921365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.30	chr11	+	2405	7	ISM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	0	7272	0	-7019	5prime_fragment	FALSE	canonical	3	95	junction_1	16.3986788085707	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCAGCTGGGTGGTGG	NA	False	NA	NA	False	AAAAAG	-10	NA	77873579	77909768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890
ES.5581.31	chr11	+	3025	11	NNC	ENSMUSG00000037791.16	novel	3047	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	38.0178905253829	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTCAGTGTGAACAA	NA	False	NA	NA	False	AATAAA	-16	NA	77873579	77917001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77874988_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
ES.5581.32	chr11	+	5181	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	4	-6	intron_retention	FALSE	non_canonical	0	0	junction_10	44.1888918537827	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTTTTCTGCCTGT	NA	False	NA	12	True	TATAAA	-16	NA	77873583	77921359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915995_77916207_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.33	chr11	+	5583	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	13	-3	intron_retention	FALSE	canonical	3	95	junction_1	14.1333463585218	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873592	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.35	chr11	+	4531	15	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	19	-3	intron_retention	FALSE	canonical	1	1	junction_10	44.0141442942968	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873598	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916763_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.36	chr11	+	3505	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-18	-478	intron_retention	FALSE	canonical	0	0	junction_8	44.403989524752	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATCTATACAATATCA	NA	False	NA	17	True	ATTAAA	-25	NA	77873609	77920887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77914445_77914646_77915638_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.37	chr11	+	4060	16	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-17	-470	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	43.6590833109853	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAATATCATTGTTTTA	NA	False	NA	25	True	ATTAAA	-33	NA	77873610	77920895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77897891_77897995_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.38	chr11	+	4552	16	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.0938393278093	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873616	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77879465_77879600_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.39	chr11	+	4975	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	35.0044457817831	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTTTTCTGCCTGT	NA	False	NA	12	True	TATAAA	-16	NA	77873641	77921359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915995_77916207_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.4	chr11	+	4391	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-118	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.5596007725142	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873461	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.40	chr11	+	4160	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	98	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	35.4983123192468	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTATGTTTTCTGCCT	NA	False	NA	10	True	TATAAA	-14	NA	77873725	77921357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.41	chr11	+	2732	12	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	421	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	47.4691722494672	249	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTGGGGAGTTTGCC	NA	False	NA	NA	False	GATAAA	-12	NA	77874048	77917038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77897891_77897995_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710
ES.5581.42	chr11	+	4068	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	519	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.0044457817831	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCAAAAATACTTCAA	NA	False	NA	-6	True	NA	NA	NA	77874146	77921341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916509_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.43	chr11	+	4124	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	924	0	924	0	3prime_fragment	FALSE	canonical	3	111	junction_6	11.1795459890243	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGCCTGTCTGTCC	NA	False	NA	18	True	TATAAA	-22	NA	77874551	77921365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.44	chr11	+	3364	14	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	1212	472	1212	-472	3prime_fragment	FALSE	canonical	3	111	junction_6	11.1795459890243	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77874839	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.45	chr11	+	5529	12	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	1254	-8	intron_retention	FALSE	non_canonical	0	0	junction_8	49.1916474802195	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTATGTTTTCTGCCT	NA	False	NA	10	True	TATAAA	-14	NA	77874881	77921357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915995_77916207_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.46	chr11	+	7413	8	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	23926	3	-16653	-3	intron_retention	FALSE	canonical	3	111	junction_5	10.8289106618556	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77897553	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786
ES.5581.47	chr11	+	2417	9	NNC	ENSMUSG00000037791.16	novel	636	7	NA	NA	-16294	-2	intron_retention	FALSE	canonical	1	2	junction_1	52.1235011774919	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGTGTGAACAAGATAA	NA	False	NA	NA	False	AATAAA	-21	NA	77897912	77917006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77897995_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916710
ES.5581.48	chr11	+	3889	11	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	29659	6	-10920	-6	3prime_fragment	FALSE	canonical	3	111	junction_3	11.5762688289448	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTTTTCTGCCTGT	NA	False	NA	12	True	TATAAA	-16	NA	77903286	77921359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.49	chr11	+	2665	1	NIC	ENSMUSG00000037791.16	novel	3047	11	NA	NA	-9409	-9325	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	77904797	77907462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77904800_77907500
ES.5581.5	chr11	+	3942	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-100	-472	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	35.4983123192468	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77873479	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.50	chr11	+	2764	8	ISM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	39555	3	-1024	-3	3prime_fragment	FALSE	canonical	3	119	junction_1	9.31095470674304	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77913182	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.51	chr11	+	4987	3	NNC	ENSMUSG00000037791.16	novel	636	7	NA	NA	8	-472	intron_retention	FALSE	non_canonical	0	0	junction_2	60.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77914552	77920893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77914646_77915786_77915995_77916207
ES.5581.52	chr11	+	157	1	Intergenic	novelGene_4405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77916008	77916165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77916000_77916200
ES.5581.6	chr11	+	3960	10	ISM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	-95	33	-95	-1	intron_retention	FALSE	canonical	3	95	junction_1	13.8644228953903	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGTGTGAACAAGATAAA	NA	False	NA	NA	False	AATAAA	-22	NA	77873484	77917007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786
ES.5581.7	chr11	+	4700	15	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-95	-1	intron_retention	FALSE	canonical	3	11	junction_9	32.5263629339999	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTCTGCCTGTCTGTC	NA	False	NA	17	True	TATAAA	-21	NA	77873484	77921364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.8	chr11	+	4490	15	NNC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	-90	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	34.2661402458307	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTCTGCCTGTCTG	NA	False	NA	15	True	TATAAA	-19	NA	77873489	77921362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77874204_77874841_77874969_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5581.9	chr11	+	4355	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	-107	162	-59	-162	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACCTGTTCTGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	77873520	77921203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ES.5582.1	chr11	+	1820	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	-42	1	-42	1	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGCTCCCGCCTCT	NA	False	NA	4	True	AATAAA	-16	NA	77923063	77928691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
ES.5582.11	chr11	+	3344	8	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	22	1	12	-1	intron_retention	FALSE	canonical	3	351	junction_3	25.6999960295399	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77928778	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725
ES.5582.12	chr11	+	2797	12	NNC	ENSMUSG00000061981.15	novel	2699	12	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	146.734651160657	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77928778	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77940303_77940386_77944344_77944546_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.13	chr11	+	6481	11	NIC	ENSMUSG00000061981.15	novel	2712	12	NA	NA	-19	0	intron_retention	FALSE	canonical	3	34	junction_2	107.103734762145	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928790	77951260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77928939_77940303_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.14	chr11	+	2649	12	NNC	ENSMUSG00000061981.15	novel	2699	12	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	2	10	junction_2	140.855473670035	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77928795	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77931087_77931158_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.15	chr11	+	2738	13	NNC	ENSMUSG00000061981.15	novel	2699	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	170.037495864883	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77928797	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77931087_77931158_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.16	chr11	+	4043	11	NIC	ENSMUSG00000061981.15	novel	2712	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	22	junction_2	139.474585498577	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928806	77951260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.17	chr11	+	3448	10	NNC	ENSMUSG00000061981.15	novel	2621	11	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_6	123.138685239323	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928806	77951260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77940303_77940386_77945610_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948729_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.18	chr11	+	3405	9	ISM	ENSMUSG00000061981.15	ENSMUST00000100784.9	2699	12	43	-3	0	0	intron_retention	FALSE	canonical	3	22	junction_2	157.090738110176	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928809	77951260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725
ES.5582.19	chr11	+	2996	11	NNC	ENSMUSG00000061981.15	novel	2699	12	NA	NA	31	0	intron_retention	FALSE	canonical	2	10	junction_2	147.160456645119	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77928840	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77931087_77931158_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77949517_77949770_77949921_77950020
ES.5582.2	chr11	+	1364	5	NNC	ENSMUSG00000020834.18	novel	1779	5	NA	NA	-30	-313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.2986259800545	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTAACCCCAGATTCA	NA	False	NA	NA	False	AATGAA	-17	NA	77923144	77928304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77923325_77923410_77923530_77924838_77924963_77925088_77925413_77927687
ES.5582.20	chr11	+	6362	8	NIC	ENSMUSG00000061981.15	novel	2558	12	NA	NA	11356	-1	intron_retention	FALSE	canonical	3	354	junction_5	24.6195541994487	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77942485	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.21	chr11	+	3764	9	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	15446	1	13073	-1	3prime_fragment	FALSE	canonical	3	351	junction_1	25.7960752828798	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77944202	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.22	chr11	+	3002	4	ISM	ENSMUSG00000061981.15	ENSMUST00000136353.2	2558	12	15538	3	15538	0	intron_retention	FALSE	canonical	3	378	junction_3	28.8020061029706	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77946667	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77946707_77948087_77948207_77948313_77948428_77948527
ES.5582.23	chr11	+	1907	5	ISM	ENSMUSG00000061981.15	ENSMUST00000136353.2	2558	12	17397	3	17397	0	3prime_fragment	FALSE	canonical	3	354	junction_2	13.2003787824441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77948526	77951257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.24	chr11	+	1677	4	NNC	ENSMUSG00000061981.15	novel	2621	11	NA	NA	17678	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.310660347249	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77948807	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77948941_77949361_77949517_77949770_77949921_77950020
ES.5582.3	chr11	+	1818	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	-26	-1	-23	1	multi-exon	FALSE	canonical	3	86	junction_3	4.08248290463863	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGCTCCCGCCTCT	NA	False	NA	4	True	AATAAA	-16	NA	77923151	77928691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
ES.5582.4	chr11	+	4798	2	Fusion	ENSMUSG00000061981.15_ENSMUSG00000020834.18	novel	2621	11	NA	NA	-2772	2177	multi-exon	FALSE	canonical	0	0	junction_1	0	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCATTGCTCTTGGAGA	NA	False	NA	NA	False	AAAACA	-11	NA	77925984	77930869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_77926726_77926812
ES.5582.5	chr11	+	2754	12	FSM	ENSMUSG00000061981.15	ENSMUST00000148162.9	2712	12	-43	1	-43	-1	multi-exon	FALSE	canonical	3	22	junction_2	138.547303733782	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77928713	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.6	chr11	+	2639	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	-17	-1	-17	1	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATCGTATATTCTGTG	NA	False	NA	22	True	AATAAA	-19	NA	77928739	77951261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.7	chr11	+	2715	12	NNC	ENSMUSG00000061981.15	novel	2712	12	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	147.861281874891	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACCTTTCATCGTATAT	NA	False	NA	16	True	AATAAA	-13	NA	77928741	77951255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77940303_77940386_77944025_77944110_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5582.8	chr11	+	2727	10	ISM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	-7	1	-7	-1	intron_retention	FALSE	canonical	3	351	junction_3	24.7346410755402	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77928749	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770
ES.5582.9	chr11	+	2779	12	NNC	ENSMUSG00000061981.15	novel	2712	12	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	149.194808586261	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCATCGTATATTCTG	NA	False	NA	20	True	AATAAA	-17	NA	77928769	77951259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77928939_77940303_77940386_77941840_77942013_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ES.5583.1	chr11	-	6350	2	Antisense	novelGene_ENSMUSG00000037791.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGGCCAGCGGCAAAGC	7479	False	NA	NA	False	NA	NA	NA	77886385	77876554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_77877919_77881399
ES.5583.2	chr11	-	162	1	Intergenic	novelGene_4404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTTGACAAGCTCTACA	6531	False	NA	NA	False	NA	NA	NA	77878023	77877861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77877900_77878000
ES.5584.1	chr11	-	2349	2	FSM	ENSMUSG00000087050.2	ENSMUST00000150471.2	2429	2	80	0	80	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATAGAACAAGTTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	77923411	77920837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77922758_77922982
ES.5585.1	chr11	-	170	1	Intergenic	novelGene_4406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77932522	77932352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77932400_77932500
ES.5586.1	chr11	-	171	1	Intergenic	novelGene_4407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	77933406	77933235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77933200_77933400
ES.5587.1	chr11	-	178	1	Intergenic	novelGene_4408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGTCAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	77935042	77934864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77934900_77935000
ES.5588.1	chr11	-	331	1	Intergenic	novelGene_4409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACCAACCAAA	NA	False	NA	NA	False	NA	NA	NA	77939627	77939296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77939300_77939600
ES.5588.2	chr11	-	223	1	Intergenic	novelGene_4410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AAAACA	-27	NA	77939629	77939406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77939400_77939600
ES.5589.1	chr11	+	188	1	Intergenic	novelGene_4411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAGTAAATAAATAAACA	451	False	NA	NA	False	NA	NA	NA	77954309	77954497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77954300_77954500
ES.559.1	chr1	-	3873	1	Antisense	novelGene_ENSMUSG00000047361.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAAACAAACAAACAAA	1043	False	NA	NA	False	NA	NA	NA	59669778	59665905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_59665900_59669800
ES.559.2	chr1	-	173	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	4291	False	NA	NA	False	NA	NA	NA	59666530	59666357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59666400_59666500
ES.5590.1	chr11	+	1509	1	Antisense	novelGene_ENSMUSG00000020832.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGATTGGCCTACATAT	NA	False	NA	NA	False	NA	NA	NA	77966733	77968242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77966700_77968200
ES.5590.2	chr11	+	176	1	Intergenic	novelGene_4412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77967268	77967444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77967300_77967400
ES.5590.3	chr11	+	768	2	Antisense	novelGene_ENSMUSG00000020832.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGATTGGCCTACATAT	NA	False	NA	NA	False	NA	NA	NA	77967270	77968242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77967521_77967724
ES.5590.4	chr11	+	744	2	Antisense	novelGene_ENSMUSG00000020832.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTTTAAAAAAGAGTGGA	NA	False	NA	NA	False	NA	NA	NA	77967270	77969664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77967527_77969176
ES.5590.5	chr11	+	479	2	Antisense	novelGene_ENSMUSG00000020832.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77967270	77968208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_77967692_77968150
ES.5591.1	chr11	-	2012	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	1	1	1	-1	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATCTTTTATTTCTT	NA	False	NA	-3	True	AATAAA	-21	NA	77971208	77964202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ES.5591.2	chr11	-	1752	8	NNC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	6	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	88.8993928034175	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTATCTTTTATTTCT	NA	False	NA	-4	True	AATAAA	-20	NA	77971203	77964203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77965187_77965303_77965454_77966216_77966466_77966547_77966655_77966815_77966878_77967058_77967106_77968642_77968719_77971125
ES.5591.3	chr11	-	1977	10	NNC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	63.831375078753	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTATCTTTTATTTC	NA	False	NA	-5	True	AATAAA	-19	NA	77971196	77964204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77965001_77965105_77965187_77965324_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ES.5591.5	chr11	-	2490	8	NIC	ENSMUSG00000020832.15	novel	2131	9	NA	NA	3	-5	intron_retention	FALSE	canonical	3	182	junction_5	15.2074095796243	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTCTTATCTTTTATT	NA	False	NA	-7	True	AATAAA	-17	NA	77971206	77964206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_77965001_77965105_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77969216_77970902
ES.5591.6	chr11	-	1837	10	NNC	ENSMUSG00000020832.15	novel	2014	10	NA	NA	12	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.1516336406598	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTATTCTTATCTTTTA	NA	False	NA	-9	True	AATAAA	-15	NA	77971197	77964208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77971060
ES.5591.7	chr11	-	4730	3	ISM	ENSMUSG00000020832.15	ENSMUST00000139731.8	2131	9	1403	7	1403	-7	intron_retention	FALSE	canonical	3	198	junction_1	6.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTATTCTTATCTTTTA	NA	False	NA	-9	True	AATAAA	-15	NA	77969806	77964208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_77965001_77965105_77965454_77966216
ES.5592.1	chr11	+	377	1	Intergenic	novelGene_4413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAACAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	77972419	77972796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77972400_77972800
ES.5593.1	chr11	-	180	1	Intergenic	novelGene_4414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTGTAGGGGGTC	NA	False	NA	NA	False	NA	NA	NA	77977888	77977708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77977700_77977900
ES.5594.1	chr11	-	207	1	Intergenic	novelGene_4415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77984607	77984400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_77984400_77984600
ES.5595.1	chr11	+	258	1	Intergenic	novelGene_4416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTACTAGGATCGATGTC	1891	False	NA	NA	False	NA	NA	NA	77984778	77985036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_77984800_77985000
ES.5596.1	chr11	+	4159	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-83	-1603	-35	978	multi-exon	FALSE	canonical	3	49	junction_2	46.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGTAGCAGGGGAATT	2563	False	NA	NA	False	AATACA	-12	NA	77985450	78048504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044634
ES.5596.10	chr11	+	2952	4	NNC	ENSMUSG00000037750.17	novel	2473	3	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.8916141927034	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCGTGTGTTATGCCA	2642	False	NA	9	True	AAAAAG	-7	NA	77985529	78047533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77985618_78033918_78034041_78044634_78044873_78045029
ES.5596.11	chr11	+	3764	4	NNC	ENSMUSG00000037750.17	novel	3258	3	NA	NA	20	634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	58.1262992686328	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTCATCTTTTTTTT	2666	False	NA	NA	False	AGTAAA	-5	NA	77985553	78048160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_77985618_78033918_78034041_78044522_78047092_78047151
ES.5596.12	chr11	+	3288	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-35	7	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCGTGTGTTATGCCA	NA	False	NA	9	True	AAAAAG	-7	NA	78006396	78047533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78006664_78033918_78034041_78044634
ES.5596.13	chr11	+	2713	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-35	57	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTAATGTCGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	78006396	78046958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78006664_78033918_78034041_78044634
ES.5596.14	chr11	+	4015	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	-22	-635	-22	635	multi-exon	FALSE	canonical	3	8	junction_1	36	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTCATCTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-6	NA	78006409	78048161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78006664_78033918_78034041_78044522
ES.5596.15	chr11	+	3434	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	-16	-60	-16	60	multi-exon	FALSE	canonical	3	8	junction_1	36	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTGTCTGAGCACTG	NA	False	NA	62	True	NA	NA	NA	78006415	78047586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78006664_78033918_78034041_78044522
ES.5596.16	chr11	+	2751	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	-16	623	-16	2	multi-exon	FALSE	canonical	3	8	junction_1	36	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATGCATTTGGTT	NA	False	NA	NA	False	ATTAAA	-28	NA	78006415	78046903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78006664_78033918_78034041_78044522
ES.5596.17	chr11	+	3881	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-8	627	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACACCAACCTCATCT	NA	False	NA	NA	False	TATAAA	-6	NA	78006423	78048153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78006664_78033918_78034041_78044634
ES.5596.18	chr11	+	3390	3	NNC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	-2	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAGGAAAAAAAAAAG	NA	False	NA	-17	True	TTTAAA	-29	NA	78006429	78047507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78006713_78033918_78034041_78044522
ES.5596.2	chr11	+	3187	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-55	-659	-7	34	multi-exon	FALSE	canonical	3	49	junction_2	46.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACACGAAGTCCTAATTT	2591	False	NA	36	True	AAAAAG	-34	NA	77985478	78047560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044634
ES.5596.20	chr11	+	6657	2	NNC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	13	-32978	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGAAGCAAAGCATAGA	NA	False	NA	NA	False	NA	NA	NA	78006444	78013923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78011748_78012569
ES.5596.21	chr11	+	6725	1	Intergenic	novelGene_4417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGAAGCAAAGCATAGA	NA	False	NA	NA	False	NA	NA	NA	78007198	78013923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78007200_78013900
ES.5596.22	chr11	+	185	1	Intergenic	novelGene_4419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAATAGATTTTT	4526	False	NA	NA	False	NA	NA	NA	78042526	78042711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78042500_78042700
ES.5596.3	chr11	+	3788	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-41	-1274	7	649	multi-exon	FALSE	canonical	3	49	junction_2	46.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTACCTTGTCCT	2605	False	NA	NA	False	AGTAAA	-20	NA	77985492	78048175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044634
ES.5596.4	chr11	+	3893	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	9	-644	9	644	multi-exon	FALSE	canonical	3	80	junction_2	31	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTACCTT	2607	False	NA	NA	False	AGTAAA	-15	NA	77985494	78048170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044522
ES.5596.5	chr11	+	3277	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	15	-34	15	34	multi-exon	FALSE	canonical	3	80	junction_2	31	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACACGAAGTCCTAATTT	2613	False	NA	36	True	AAAAAG	-34	NA	77985500	78047560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044522
ES.5596.6	chr11	+	2656	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	29	573	-19	52	multi-exon	FALSE	canonical	3	80	junction_2	31	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAAGTTCTAATGTCGT	2627	False	NA	NA	False	TTTAAA	-44	NA	77985514	78046953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044522
ES.5596.7	chr11	+	2679	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-18	-188	-18	188	multi-exon	FALSE	canonical	3	49	junction_2	46.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAGCCCCTTCAATTC	2628	False	NA	NA	False	AATGAA	-22	NA	77985515	78047089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044634
ES.5596.8	chr11	+	2544	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	-16	-55	-16	55	multi-exon	FALSE	canonical	3	49	junction_2	46.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTAATGTCGTGTC	2630	False	NA	NA	False	NA	NA	NA	77985517	78046956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044634
ES.5596.9	chr11	+	2766	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	32	460	-16	165	multi-exon	FALSE	canonical	3	80	junction_2	31	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAACAAAAGGAAAAACAC	2630	False	NA	NA	False	NA	NA	NA	77985517	78047066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_77985618_78033918_78034041_78044522
ES.5597.1	chr11	-	167	1	Intergenic	novelGene_4418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATCTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78033783	78033616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78033600_78033800
ES.5598.1	chr11	-	4686	1	Antisense	novelGene_ENSMUSG00000037750.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	78047421	78042735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78042700_78047400
ES.5598.10	chr11	-	2118	6	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	28	-1	intron_retention	FALSE	canonical	3	463	junction_3	28.6258624324229	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGCCTGTCTCCTCCC	NA	False	NA	0	True	NA	NA	NA	78056387	78050226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
ES.5598.11	chr11	-	3882	3	NIC	ENSMUSG00000017386.11	novel	925	5	NA	NA	1386	-6	intron_retention	FALSE	canonical	3	489	junction_1	20.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATTCCAGCCTGTCTC	NA	False	NA	-5	True	NA	NA	NA	78054956	78050231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78051775_78051858_78052449_78053207
ES.5598.13	chr11	-	2333	5	FSM	ENSMUSG00000017386.11	ENSMUST00000148218.2	925	5	-22	-1386	-22	-7	multi-exon	FALSE	canonical	3	463	junction_2	31.9482002622996	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCCAGCCTGTCT	NA	False	NA	-6	True	NA	NA	NA	78056364	78050232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
ES.5598.14	chr11	-	2807	5	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	19	-7	intron_retention	FALSE	canonical	3	463	junction_3	28.8996107240219	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCCAGCCTGTCT	NA	False	NA	-6	True	NA	NA	NA	78056323	78050232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78053260_78056123
ES.5598.15	chr11	-	1803	8	NNC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	11	-7	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	170.977740525198	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCCAGCCTGTCT	NA	False	NA	-6	True	NA	NA	NA	78056404	78050232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78050826_78051082_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ES.5598.16	chr11	-	4889	6	ISM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	46	7	-27	-7	intron_retention	FALSE	canonical	3	457	junction_4	26.6338130953868	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCCAGCCTGTCT	NA	False	NA	-6	True	NA	NA	NA	78056369	78050232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207
ES.5598.17	chr11	-	2008	8	NNC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.495822925655	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGATTCCAGCCTGTC	NA	False	NA	-7	True	NA	NA	NA	78056407	78050233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123_78056286_78056339
ES.5598.18	chr11	-	5187	4	ISM	ENSMUSG00000017386.11	ENSMUST00000148218.2	925	5	-13	-1385	-13	-8	intron_retention	FALSE	canonical	3	463	junction_2	27.5801861245835	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGATTCCAGCCTGTC	NA	False	NA	-7	True	NA	NA	NA	78056355	78050233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78051775_78051858_78052021_78052112_78052449_78053207
ES.5598.19	chr11	-	2147	8	NNC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	-15	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	222.355203974843	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACCTGATTCCAGCCTG	NA	False	NA	-9	True	NA	NA	NA	78056357	78050235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78052614_78052752_78053207_78053260_78056123
ES.5598.2	chr11	-	5199	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	64	-3185	-9	2284	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGACTGTACCTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	78056351	78047040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ES.5598.20	chr11	-	2177	5	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	-25	-14	intron_retention	FALSE	canonical	3	489	junction_2	21.5058131676066	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTAACCTGATTCCAG	NA	False	NA	-13	True	NA	NA	NA	78056367	78050239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78051375_78051618_78051775_78051858_78052449_78053207_78053260_78056123
ES.5598.3	chr11	-	4429	5	FSM	ENSMUSG00000017386.11	ENSMUST00000148218.2	925	5	-6	-3498	-6	1204	multi-exon	FALSE	canonical	3	463	junction_2	31.9482002622996	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACCATGCCCATAAACC	NA	False	NA	NA	False	NA	NA	NA	78056348	78048120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
ES.5598.4	chr11	-	4102	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	29	-2053	29	1152	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGTTGGTGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	78056386	78048172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ES.5598.5	chr11	-	4277	5	NIC	ENSMUSG00000017386.11	novel	3223	6	NA	NA	-27	1152	intron_retention	FALSE	canonical	0	0	junction_4	203.726992566032	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGTTGGTGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-29	NA	78056369	78048172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78056123
ES.5598.6	chr11	-	2978	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	0	-900	0	-1	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTGTGGGGTTAACTC	NA	False	NA	NA	False	AATAAA	-27	NA	78056415	78049325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ES.5598.7	chr11	-	2078	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	-1	1	-1	-1	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGCCTGTCTCCTCCC	NA	False	NA	0	True	NA	NA	NA	78056416	78050226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ES.5598.8	chr11	-	1976	7	NNC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	252	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	183.558725086975	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGCCTGTCTCCTCCC	NA	False	NA	0	True	NA	NA	NA	78056090	78050226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78055899
ES.5598.9	chr11	-	5711	3	ISM	ENSMUSG00000017386.11	ENSMUST00000149437.8	3223	6	302	902	229	-1	intron_retention	FALSE	canonical	3	463	junction_2	13	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCAGCCTGTCTCCTCCC	NA	False	NA	0	True	NA	NA	NA	78056113	78050226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78051775_78051858_78052021_78052112
ES.5599.1	chr11	+	1637	1	Antisense	novelGene_ENSMUSG00000017405.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78060763	78062400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_78060800_78062400
ES.56.1	chr1	+	183	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	9024548	9024731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9024500_9024700
ES.560.1	chr1	+	156	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	6750	False	NA	NA	False	NA	NA	NA	59696296	59696452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59696300_59696500
ES.5600.1	chr11	+	593	1	Intergenic	novelGene_4420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTTTCTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	78066067	78066660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78066100_78066700
ES.5601.1	chr11	+	3660	3	FSM	ENSMUSG00000019437.18_ENSMUSG00000099101.3	ENSMUST00000140379.2	408	3	-2571	-681	-9	-48	multi-exon	FALSE	canonical	3	167	junction_1	12	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCATGGGGACTGCATC	NA	False	NA	4	True	AATAAA	-16	NA	78067527	78071598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78070279_78070365_78070449_78070772
ES.5601.10	chr11	+	3118	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	16	-1722	16	633	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTTCATAACACTATT	NA	False	NA	NA	False	NA	NA	NA	78069526	78073368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ES.5601.11	chr11	+	1223	4	NNC	ENSMUSG00000019437.18	novel	1412	4	NA	NA	-22	5	intron_retention	FALSE	canonical	0	0	junction_3	76.4765759345086	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	AATGAA	-6	NA	78069534	78071311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78069883_78070195_78070279_78070365_78070619_78070772
ES.5601.12	chr11	+	3793	1	FSM	ENSMUSG00000099101.3	ENSMUST00000184358.3	61	1	-110	-3622	-110	3622	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	78069542	78073335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069500_78073300
ES.5601.13	chr11	+	2448	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	41	-1077	-5	-12	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTGTGCTCAATTGC	NA	False	NA	NA	False	AATAAA	-10	NA	78069551	78072723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ES.5601.14	chr11	+	3375	3	FSM	ENSMUSG00000019437.18	ENSMUST00000108338.2	714	3	-27	-2634	4	600	multi-exon	FALSE	canonical	3	157	junction_1	5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	78069560	78073335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069883_78070195_78070279_78070365
ES.5601.2	chr11	+	3255	4	NIC	ENSMUSG00000019437.18	novel	2897	6	NA	NA	41	5	intron_retention	FALSE	canonical	0	0	junction_1	84.9483503207815	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	AATGAA	-6	NA	78067577	78071311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78067714_78067781_78070279_78070365_78070449_78070772
ES.5601.3	chr11	+	1385	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-105	-51	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTAGCATGGGGACTGC	NA	False	NA	1	True	AATAAA	-13	NA	78068850	78071595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
ES.5601.4	chr11	+	1026	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	-32	3	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAAGTCCTGTTCTTG	NA	False	NA	NA	False	AATGAA	-4	NA	78068923	78071309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
ES.5601.5	chr11	+	4018	3	FSM	ENSMUSG00000019437.18_ENSMUSG00000099101.3	ENSMUST00000140379.2	408	3	-1159	-2451	-16	633	multi-exon	FALSE	canonical	3	167	junction_1	12	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTTCATAACACTATT	NA	False	NA	NA	False	NA	NA	NA	78068939	78073368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78070279_78070365_78070449_78070772
ES.5601.6	chr11	+	2013	2	Fusion	ENSMUSG00000019437.18_ENSMUSG00000099101.3	novel	408	3	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	191	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCTCTGAAGTCCTGT	NA	False	NA	NA	False	AAAACA	-7	NA	78068967	78071304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78070449_78070772
ES.5601.7	chr11	+	1413	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	-336	335	200	5	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCCTGTTCTTGGG	NA	False	NA	NA	False	AATGAA	-6	NA	78069174	78071311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ES.5601.8	chr11	+	1536	4	FSM	ENSMUSG00000019437.18	ENSMUST00000092880.14	2700	4	26	1138	-8	-49	multi-exon	FALSE	canonical	3	28	junction_1	71.8532455000391	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGCATGGGGACTGCAT	NA	False	NA	3	True	AATAAA	-15	NA	78069502	78071597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78070048_78070195_78070279_78070365_78070449_78070772
ES.5601.9	chr11	+	1379	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	10	23	10	-23	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCCCATTGGGTTAAGC	NA	False	NA	29	True	AATAAA	-41	NA	78069520	78071623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ES.5602.1	chr11	-	3028	13	FSM	ENSMUSG00000017405.15	ENSMUST00000131015.8	2561	13	-51	-416	-3	1	multi-exon	FALSE	canonical	3	30	junction_7	9.49085817452189	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCTTATGATCTCTTA	6245	False	NA	1	True	AATAAA	-15	NA	78067504	78056930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.10	chr11	-	4123	16	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	20.3550703484141	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6297	False	NA	0	True	AATAAA	-14	NA	78067452	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78065840_78066480_78066661
ES.5602.12	chr11	-	2766	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.7488256769856	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6268	False	NA	0	True	AATAAA	-14	NA	78067481	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061938_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.13	chr11	-	5518	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	-2636	0	-2572	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	3676	False	NA	0	True	AATAAA	-14	NA	78070073	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.14	chr11	-	3068	13	NNC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	-6	0	intron_retention	FALSE	non_canonical	0	0	junction_4	16.3577623435753	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6283	False	NA	0	True	AATAAA	-14	NA	78067466	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058448_78058548_78058713_78058917_78059069_78059794_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.15	chr11	-	3291	9	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-1556	0	intron_retention	FALSE	canonical	1	11	junction_8	15.8567808838995	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	NA	False	NA	0	True	AATAAA	-14	NA	78062210	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78057604_78057975_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78061355_78061438_78061621_78061698_78061779_78061915
ES.5602.16	chr11	-	5936	5	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	-11	0	intron_retention	FALSE	canonical	3	45	junction_3	5.52268050859363	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6278	False	NA	0	True	AATAAA	-14	NA	78067471	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78058713_78058917_78059069_78059797_78063510_78063750_78063957_78067385
ES.5602.17	chr11	-	8199	2	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	2066	0	intron_retention	FALSE	canonical	3	45	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	8378	False	NA	0	True	AATAAA	-14	NA	78065371	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78063510_78063750
ES.5602.18	chr11	-	2875	14	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_13	15.9076476714148	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGGCTTATGATCTCT	6308	False	NA	-1	True	AATAAA	-13	NA	78067441	78056932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067395
ES.5602.19	chr11	-	3033	7	NIC	ENSMUSG00000017405.15	novel	2561	13	NA	NA	-866	-1	intron_retention	FALSE	canonical	3	39	junction_5	7.42555646998182	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGGCTTATGATCTCT	NA	False	NA	-1	True	AATAAA	-13	NA	78061520	78056932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78061355_78061438
ES.5602.2	chr11	-	3034	13	NNC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	11	1	intron_retention	FALSE	canonical	1	2	junction_1	15.9260443578714	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCTTATGATCTCTTA	6259	False	NA	1	True	AATAAA	-15	NA	78067490	78056930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057601_78057975_78058135_78058288_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.20	chr11	-	2046	5	NNC	ENSMUSG00000017405.15	novel	2561	13	NA	NA	509	-2	intron_retention	FALSE	canonical	0	0	junction_4	23.7170824512628	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGCTTATGATCTC	NA	False	NA	-2	True	AATAAA	-12	NA	78060145	78056933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060046
ES.5602.21	chr11	-	3981	14	NNC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	1	-2	intron_retention	TRUE	non_canonical	0	0	junction_12	23.7060399763635	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGCTTATGATCTC	6297	False	NA	-2	True	AATAAA	-12	NA	78067452	78056933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057525_78057975_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78065840_78066480_78066663_78066935_78067385
ES.5602.22	chr11	-	5006	7	NIC	ENSMUSG00000017405.15	novel	2561	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	40	junction_3	7.19760762722973	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGCTTATGATCTC	6290	False	NA	-2	True	AATAAA	-12	NA	78067459	78056933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78058448_78058548_78059069_78059797_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.24	chr11	-	5675	8	NIC	ENSMUSG00000017405.15	novel	2882	14	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	45	junction_1	5.62791874388349	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTGGCTTATGATCTC	6274	False	NA	-2	True	AATAAA	-12	NA	78067475	78056933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78058448_78058548_78058713_78058917_78059069_78059797_78061355_78061438_78061621_78061698_78063510_78063750_78063957_78067385
ES.5602.25	chr11	-	1450	7	NNC	ENSMUSG00000017405.15	novel	2561	13	NA	NA	553	-15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	20.9078666747444	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATATCAAATGCCT	NA	False	NA	-19	True	NA	NA	NA	78060101	78056950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060055
ES.5602.26	chr11	-	2746	4	NNC	ENSMUSG00000017405.15	novel	2876	4	NA	NA	-17	-410	intron_retention	FALSE	non_canonical	0	0	junction_3	20.9814733091416	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAATT	6272	False	NA	NA	False	NA	NA	NA	78067477	78062422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78063510_78063750_78063957_78065840_78066480_78066663
ES.5602.27	chr11	-	1117	3	ISM	ENSMUSG00000017405.15	ENSMUST00000142812.8	2876	4	-19	1856	1	-660	5prime_fragment	FALSE	canonical	3	45	junction_1	5.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGGGGTTTCTTAAAG	6290	False	NA	NA	False	NA	NA	NA	78067459	78062672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78063510_78063750_78063957_78067385
ES.5602.3	chr11	-	2637	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	14.9114734622815	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6270	False	NA	0	True	AATAAA	-14	NA	78067479	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78062065_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.4	chr11	-	2801	16	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	20.3550703484141	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6307	False	NA	0	True	AATAAA	-14	NA	78067442	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78065840_78065892_78067385
ES.5602.5	chr11	-	5118	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	-2309	0	-2309	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	3939	False	NA	0	True	AATAAA	-14	NA	78069810	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.6	chr11	-	2795	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.7488256769856	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6266	False	NA	0	True	AATAAA	-14	NA	78067483	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061911_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5602.8	chr11	-	2740	15	NIC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	17.802917669613	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6307	False	NA	0	True	AATAAA	-14	NA	78067442	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067395
ES.5602.9	chr11	-	2793	15	NNC	ENSMUSG00000017405.15	novel	2809	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.4848187896451	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6297	False	NA	0	True	AATAAA	-14	NA	78067452	78056931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061207_78061355_78061438_78061621_78061698_78061779_78061878_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ES.5603.1	chr11	-	588	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	-25	-3	-25	0	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTCATTTGTCGC	5938	False	NA	-11	True	CATAAA	-4	NA	78074435	78071757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
ES.5603.11	chr11	-	632	5	NNC	ENSMUSG00000058546.9	novel	560	5	NA	NA	59	-3	at_least_one_novel_splicesite	FALSE	canonical	1	185	junction_4	7509.00459448521	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	6022	False	NA	-17	True	AATATA	-16	NA	78074351	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074210
ES.5603.12	chr11	-	345	4	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	28	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	7727.85547368882	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5991	False	NA	-17	True	AATATA	-16	NA	78074382	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78071824_78071979_78072050_78072242_78072420_78074344
ES.5603.14	chr11	-	518	5	NNC	ENSMUSG00000058546.9	novel	560	5	NA	NA	66	-3	at_least_one_novel_splicesite	FALSE	canonical	3	677	junction_4	7315.52547668313	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	6029	False	NA	-17	True	AATATA	-16	NA	78074344	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074317
ES.5603.17	chr11	-	1411	2	NIC	ENSMUSG00000058546.9	novel	588	4	NA	NA	25	-5	intron_retention	FALSE	canonical	3	18151	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATGCTGCTTGTCA	5988	False	NA	-19	True	AATATA	-14	NA	78074385	78071765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78072420_78073628
ES.5603.18	chr11	-	2618	1	FSM	ENSMUSG00000077625.3	ENSMUST00000104437.3	71	1	-1801	-746	-1801	746	mono-exon	FALSE	NA	NA	NA	NA	NA	712	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATGCTGCTTGTCA	5990	False	NA	-19	True	AATATA	-14	NA	78074383	78071765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78071800_78074400
ES.5603.3	chr11	-	2464	2	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	27	3	27	-3	intron_retention	FALSE	canonical	3	10927	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5990	False	NA	-17	True	AATATA	-16	NA	78074383	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78071824_78071979
ES.5603.4	chr11	-	1738	4	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	28	-3	intron_retention	FALSE	canonical	3	10927	junction_1	3555.33189574319	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5991	False	NA	-17	True	AATATA	-16	NA	78074382	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78071824_78071979_78072050_78072242_78073813_78074344
ES.5603.6	chr11	-	2087	2	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	28	-3	intron_retention	FALSE	canonical	3	11765	junction_1	0	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5991	False	NA	-17	True	AATATA	-16	NA	78074382	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78073813_78074344
ES.5603.8	chr11	-	1894	3	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	28	-3	intron_retention	FALSE	canonical	3	11765	junction_2	3544	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5991	False	NA	-17	True	AATATA	-16	NA	78074382	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78072050_78072242_78073813_78074344
ES.5603.9	chr11	-	677	4	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	36	-3	intron_retention	FALSE	canonical	3	11765	junction_3	3188.75705495975	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGCTGCTTGTCATT	5999	False	NA	-17	True	AATATA	-16	NA	78074374	78071763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78072050_78072242_78072420_78073628_78073813_78074344
ES.5604.1	chr11	+	245	1	Intergenic	novelGene_4421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACACCTGTACTTAT	2523	False	NA	NA	False	NA	NA	NA	78075753	78075998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78075800_78076000
ES.5604.2	chr11	+	397	1	Intergenic	novelGene_4422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAGAAAA	2524	False	NA	NA	False	NA	NA	NA	78075754	78076151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78075800_78076200
ES.5605.1	chr11	+	1398	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	-25	-5	-25	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	6000	False	NA	26	True	ATTAAA	-20	NA	78079230	78083019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.10	chr11	+	1943	8	NIC	ENSMUSG00000002059.19	novel	1685	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	127	junction_1	11.3874259333598	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTCTTTCTTTAAAGA	6378	False	NA	22	True	ATTAAA	-16	NA	78079608	78083015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081563_78082033_78082116_78082190_78082509_78082599
ES.5605.11	chr11	+	981	8	ISM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	1350	1	-1	-1	3prime_fragment	FALSE	canonical	3	137	junction_2	7.94110977696417	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCTTTCTTTAAA	7724	False	NA	20	True	ATTAAA	-14	NA	78080954	78083013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.12	chr11	+	790	6	NNC	ENSMUSG00000002059.19	novel	950	8	NA	NA	144	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.1132264980013	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTTTAAAGATTTA	8092	False	NA	26	True	ATTAAA	-20	NA	78081322	78083019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082409_78082509_78082599
ES.5605.2	chr11	+	3083	10	Fusion	ENSMUSG00000002059.19_ENSMUSG00000044122.16	novel	795	10	NA	NA	-5	1928	multi-exon	FALSE	canonical	0	0	junction_6	61.7575906265781	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTTATGTTAGATCTG	6030	False	NA	NA	False	NA	NA	NA	78079260	78084947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081567_78082037_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.3	chr11	+	1254	9	NIC	ENSMUSG00000002059.19	novel	795	10	NA	NA	9	-1	intron_retention	FALSE	canonical	2	3	junction_1	49.263164484227	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCTTTCTTTAAA	6044	False	NA	20	True	ATTAAA	-14	NA	78079274	78083013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78079338_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082509_78082599
ES.5605.4	chr11	+	1406	10	NIC	ENSMUSG00000002059.19	novel	1368	11	NA	NA	28	1	intron_retention	FALSE	canonical	3	60	junction_1	28.9482296522603	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTCTTTCTTTAAAGA	6063	False	NA	22	True	ATTAAA	-16	NA	78079293	78083015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082282_78082400_78082509_78082599
ES.5605.5	chr11	+	1991	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-303	-3	36	-2	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTTCTTTAAAGATT	6071	False	NA	24	True	ATTAAA	-18	NA	78079301	78083017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.6	chr11	+	1293	11	NNC	ENSMUSG00000002059.19	novel	1368	11	NA	NA	37	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	44.3361026703972	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCTTTCTTTAAA	6072	False	NA	20	True	ATTAAA	-14	NA	78079302	78083013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78079338_78080030_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.7	chr11	+	1822	9	NIC	ENSMUSG00000002059.19	novel	1685	10	NA	NA	-19	-1	intron_retention	FALSE	canonical	3	127	junction_1	10.6529045335063	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCTTTCTTTAAA	6355	False	NA	20	True	ATTAAA	-14	NA	78079585	78083013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082509_78082599
ES.5605.8	chr11	+	2291	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	-16	-590	-16	585	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAGAAGCAATGAGT	6358	False	NA	NA	False	NA	NA	NA	78079588	78083604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ES.5605.9	chr11	+	1928	3	NIC	ENSMUSG00000002059.19	novel	1685	10	NA	NA	-11	35	intron_retention	FALSE	canonical	3	127	junction_1	18.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAAGTTGGGATC	6363	False	NA	NA	False	NA	NA	NA	78079593	78081794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78080217_78080396_78081022_78081114
ES.5606.1	chr11	-	177	1	Intergenic	novelGene_4423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGAAAATGCT	NA	False	NA	NA	False	NA	NA	NA	78083207	78083030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78083000_78083200
ES.5607.1	chr11	+	1269	4	FSM	ENSMUSG00000044122.16	ENSMUST00000108317.3	1359	4	-167	257	-137	2	multi-exon	FALSE	canonical	2	5	junction_2	3.74165738677394	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCGCTATTCTCTGCCT	NA	False	NA	9	True	AATAAA	-18	NA	78085392	78096332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78085781_78092637_78092719_78094890_78095024_78095665
ES.5607.2	chr11	+	1126	3	FSM	ENSMUSG00000044122.16	ENSMUST00000060539.13	960	3	-131	-35	-131	-2	multi-exon	FALSE	canonical	3	12	junction_2	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTACCGCTATTCTCT	NA	False	NA	5	True	AATAAA	-14	NA	78085398	78096328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78085781_78092637_78092719_78095665
ES.5608.1	chr11	-	184	1	Intergenic	novelGene_4424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAAATATTTCATG	NA	False	NA	NA	False	NA	NA	NA	78090302	78090118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78090100_78090300
ES.5609.1	chr11	+	157	1	Intergenic	novelGene_4425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	78130275	78130432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78130300_78130400
ES.561.1	chr1	+	208	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCAAACCTCTCTTTCC	-7	True	NA	NA	False	NA	NA	NA	59698060	59698268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59698100_59698300
ES.5610.1	chr11	+	1409	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	103.964737611686	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTGGTCATTTATTAA	NA	False	NA	18	True	NA	NA	NA	78136554	78146321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136997_78141246_78141372_78141841_78142039_78145676
ES.5610.10	chr11	+	3329	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2279	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	112.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78138850	78146317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78139319_78139818_78142039_78145676
ES.5610.11	chr11	+	982	4	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2283	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.597769336709	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78138854	78146317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78138947_78141107_78141160_78141841_78142039_78145676
ES.5610.12	chr11	+	962	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2290	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	104	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTGGTCATTTATT	NA	False	NA	16	True	NA	NA	NA	78138861	78146319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78138984_78141841_78142039_78145676
ES.5610.13	chr11	+	951	6	NNC	ENSMUSG00000002064.11	novel	964	3	NA	NA	2325	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.1711971110748	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATGAATAAATAAAT	NA	False	NA	-22	True	NA	NA	NA	78138896	78146281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78138947_78141107_78141160_78141246_78141372_78141841_78142039_78145676_78145738_78145815
ES.5610.14	chr11	+	770	4	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2329	-41	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	101.826650080746	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATGAATAAATAAAT	NA	False	NA	-22	True	NA	NA	NA	78138900	78146281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78138947_78141841_78142039_78145676_78145738_78145815
ES.5610.15	chr11	+	197	1	Intergenic	novelGene_4426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAATATCCAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	78140552	78140749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78140600_78140700
ES.5610.16	chr11	+	1435	3	NIC	ENSMUSG00000002064.11	novel	964	3	NA	NA	-473	-6	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	109	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTGTGTGGTCATTT	NA	False	NA	13	True	NA	NA	NA	78140773	78146316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78141372_78141841_78142039_78145676
ES.5610.2	chr11	+	1285	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	-17	0	-17	0	multi-exon	FALSE	canonical	3	217	junction_1	4	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136554	78146322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78136997_78141841_78142039_78145676
ES.5610.3	chr11	+	1409	5	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.0113925531757	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78136602	78146317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136997_78141107_78141160_78141246_78141372_78141841_78142039_78145676
ES.5610.4	chr11	+	1119	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	60	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.231579774185	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTGGTCATTTATT	NA	False	NA	16	True	NA	NA	NA	78136631	78146319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136744_78136829_78136997_78141841_78142039_78145676
ES.5610.5	chr11	+	1002	3	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	245	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.5	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78136816	78146317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136981_78141841_78142039_78145676
ES.5610.6	chr11	+	900	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	249	-41	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	99.5199589138893	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATGAATAAATAAAT	NA	False	NA	-22	True	NA	NA	NA	78136820	78146281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136997_78141841_78142039_78145676_78145738_78145815
ES.5610.7	chr11	+	853	4	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	260	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.231579774185	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATGAATAAATAAAT	NA	False	NA	-22	True	NA	NA	NA	78136831	78146281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78136997_78141841_78142039_78145676_78145702_78145815
ES.5610.8	chr11	+	4744	2	FSM	ENSMUSG00000002064.11	ENSMUST00000133020.2	586	2	-3784	-374	1364	-5	multi-exon	FALSE	canonical	3	225	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	False	NA	14	True	NA	NA	NA	78137935	78146317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78142039_78145676
ES.5610.9	chr11	+	940	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2279	1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTCATTTATTAAGC	NA	False	NA	20	True	NA	NA	NA	78138850	78146323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78138947_78141841_78142039_78145676
ES.5611.1	chr11	-	6572	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	-84	0	-84	0	multi-exon	TRUE	canonical	3	251	junction_18	43.9224555183955	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTTATTGTTTTTTTTG	NA	False	NA	-1	True	NA	NA	NA	78136897	78097571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.11	chr11	-	5911	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	297	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	68.9895937313003	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCGAGGCCTCCAGCT	NA	False	NA	-7	True	AATAAA	-18	NA	78136516	78097848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113097_78113169_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.13	chr11	-	6006	36	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	287	4	intron_retention	FALSE	canonical	3	251	junction_17	43.3258559744452	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136526	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.14	chr11	-	5572	35	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	287	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	70.2830473685144	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136526	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.15	chr11	-	5932	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	294	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	67.747329226206	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136519	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110158_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.17	chr11	-	6025	38	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	285	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	84.8930492017795	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136528	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136022_78136123_78136373
ES.5611.19	chr11	-	4313	13	NIC	ENSMUSG00000002052.7	novel	3856	19	NA	NA	1855	4	intron_retention	FALSE	canonical	1	1	junction_12	104.5270765028	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78112657	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111422
ES.5611.2	chr11	-	3320	14	NIC	ENSMUSG00000002052.7	novel	3856	19	NA	NA	1428	-2	intron_retention	FALSE	canonical	3	295	junction_13	32.4996131064818	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGTTTATTGTTTTTTT	NA	False	NA	-3	True	NA	NA	NA	78113084	78097573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935
ES.5611.21	chr11	-	5614	35	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-9148	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	70.9142471568795	525	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78123660	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113086_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500
ES.5611.22	chr11	-	6419	36	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	11	4	intron_retention	FALSE	canonical	2	4	junction_34	69.1846154893424	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136802	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124262_78124510_78136373
ES.5611.24	chr11	-	6078	38	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	29	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.0509197912945	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTGCCGAGGCCTCCAGC	NA	False	NA	-8	True	AATAAA	-17	NA	78136784	78097849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098310_78098412_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.25	chr11	-	6362	36	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	287	3	intron_retention	FALSE	canonical	0	0	junction_1	100.294505109213	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTGCCGAGGCCTCCAG	NA	False	NA	-9	True	AATAAA	-16	NA	78136526	78097850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098587_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116907_78117005_78117136_78117500_78117594_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.28	chr11	-	5989	38	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	287	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.3565210146499	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCTTGCCGAGGCCTCCA	NA	False	NA	-10	True	AATAAA	-15	NA	78136526	78097851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099813_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136022_78136123_78136373
ES.5611.3	chr11	-	6453	36	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	279	-4	intron_retention	FALSE	canonical	3	251	junction_17	44.5453770019393	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGGTTTATTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	78136534	78097575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.30	chr11	-	5800	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	297	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	68.9895937313003	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCTTGCCGAGGCCTCCA	NA	False	NA	-10	True	AATAAA	-15	NA	78136516	78097851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78112993_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.33	chr11	-	5145	35	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	305	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.2578373004974	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCTTGCCGAGGCCTCCA	NA	False	NA	-10	True	AATAAA	-15	NA	78136508	78097851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098188_78099922_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.37	chr11	-	5908	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	287	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	68.9078994826508	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGCCGAGGCCTCC	NA	False	NA	-11	True	AATAAA	-14	NA	78136526	78097852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112063_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.39	chr11	-	6761	35	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-224	1	intron_retention	FALSE	canonical	3	251	junction_17	44.7189319189571	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGCCGAGGCCTCC	NA	False	NA	-11	True	AATAAA	-14	NA	78137037	78097852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.40	chr11	-	6454	36	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	33	1	intron_retention	FALSE	canonical	3	251	junction_17	44.2788566118994	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGCCGAGGCCTCC	NA	False	NA	-11	True	AATAAA	-14	NA	78136780	78097852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.42	chr11	-	4232	23	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-2620	0	intron_retention	FALSE	canonical	0	0	junction_20	82.8925920585297	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGCTTGCCGAGGCCTC	NA	False	NA	-12	True	AATAAA	-13	NA	78117132	78097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116355_78116489_78116645_78116772_78116924_78117005
ES.5611.43	chr11	-	3482	15	NIC	ENSMUSG00000002052.7	novel	3856	19	NA	NA	821	0	intron_retention	FALSE	canonical	3	286	junction_14	37.7419406182652	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGCTTGCCGAGGCCTC	NA	False	NA	-12	True	AATAAA	-13	NA	78113691	78097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113312_78113595
ES.5611.45	chr11	-	5660	36	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-9783	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_35	69.379194670025	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGCTTGCCGAGGCCTC	NA	False	NA	-12	True	AATAAA	-13	NA	78124295	78097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124262
ES.5611.48	chr11	-	4707	20	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-1788	0	intron_retention	FALSE	non_canonical	0	0	junction_10	87.1118299321477	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGCTTGCCGAGGCCTC	NA	False	NA	-12	True	AATAAA	-13	NA	78116300	78097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107174_78108666_78108810_78109993_78110142_78110708_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132
ES.5611.49	chr11	-	5913	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	302	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	67.8114670371346	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCGCTTGCCGAGGCCTC	NA	False	NA	-12	True	AATAAA	-13	NA	78136511	78097853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103743_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.5	chr11	-	5964	14	NIC	ENSMUSG00000002052.7	novel	3856	19	NA	NA	1361	-6	intron_retention	FALSE	canonical	3	295	junction_13	31.9702154286801	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGGTTTATTGTTT	NA	False	NA	-7	True	NA	NA	NA	78113151	78097577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935
ES.5611.52	chr11	-	5458	34	NIC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-9147	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	69.6270400172309	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCGCTTGCCGAGGCC	NA	False	NA	-14	True	AATAAA	-11	NA	78123659	78097855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78098596_78098875_78099064_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500
ES.5611.53	chr11	-	6010	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	-246	724	-246	-442	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTTAGTGGTCAGCC	NA	False	NA	NA	False	CATAAA	-16	NA	78137059	78098295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.55	chr11	-	4923	33	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	294	-445	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.3142726211002	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTCTTTTTAGTGGTCA	NA	False	NA	NA	False	CATAAA	-13	NA	78136519	78098298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099023_78102928_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.56	chr11	-	5038	28	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	294	-8083	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.5423629155307	483	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTGGCTATTCTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	78136519	78105936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113985_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.57	chr11	-	5023	28	ISM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	287	8393	287	-8111	5prime_fragment	FALSE	canonical	3	251	junction_9	39.6440956636377	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	78136526	78105964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.6	chr11	-	6097	38	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	294	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.0509197912945	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGGTTTATTGTTT	NA	False	NA	-7	True	NA	NA	NA	78136519	78097577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098144_78098234_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.7	chr11	-	6707	37	NNC	ENSMUSG00000002052.7	novel	6488	37	NA	NA	-244	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	68.9895937313003	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAAGGGGTTTATTGTT	NA	False	NA	-8	True	NA	NA	NA	78137057	78097578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113086_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5611.8	chr11	-	6467	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	-252	273	-252	9	multi-exon	FALSE	canonical	3	251	junction_18	43.9224555183955	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGGCCTCCAGCTCCCT	NA	False	NA	-3	True	AATAAA	-22	NA	78137065	78097844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ES.5612.1	chr11	-	225	1	Intergenic	novelGene_4427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGCATATTTAAACACA	9954	False	NA	NA	False	NA	NA	NA	78150965	78150740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78150700_78151000
ES.5613.1	chr11	+	7850	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-149	51	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	132.0980497087	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTGGTCTTGTCTTTC	NA	False	NA	72	True	NA	NA	NA	78152428	78181500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.10	chr11	+	7225	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-32	-44	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	136.488557650863	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152545	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.101	chr11	+	4978	26	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-2484	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	155.68216853577	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78160312	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629_78180762_78181315
ES.5613.104	chr11	+	5372	24	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	9533	2	-686	-2	3prime_fragment	FALSE	canonical	3	553	junction_1	81.5165563569908	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCCTTCCCTCCT	NA	False	NA	19	True	AGTAAA	-12	NA	78162110	78181447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.105	chr11	+	5080	24	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	9538	289	-681	-289	3prime_fragment	FALSE	canonical	3	553	junction_1	81.5165563569908	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGTAATTGCTCTCCC	NA	False	NA	15	True	NA	NA	NA	78162115	78181160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.107	chr11	+	8673	29	Fusion	ENSMUSG00000037593.13_ENSMUSG00000010277.8	novel	7443	39	NA	NA	-212	0	intron_retention	FALSE	canonical	0	0	junction_16	291.104292623234	856	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGATTTAGAGTTGGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	78162584	78186168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78176706_78176870_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629_78181766_78182246_78182496_78182580_78182665_78182787_78184999_78185418
ES.5613.108	chr11	+	4782	25	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-131	-44	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_5	240.017230284272	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78162665	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164635_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78170851_78170953_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.109	chr11	+	1598	7	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-92	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	226.536053054107	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAATATTTTAAAT	NA	False	NA	-46	True	AAAAAG	-7	NA	78162704	78181382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165324_78181057
ES.5613.111	chr11	+	4784	25	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-20	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	205.627997276365	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78162776	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78170832_78170953_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.112	chr11	+	4269	24	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	262	-67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	158.622389283016	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAATATTTTAAAT	NA	False	NA	-46	True	AAAAAG	-7	NA	78163058	78181382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180719
ES.5613.113	chr11	+	3832	21	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-304	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	218.8	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCCTTCCCTCCT	NA	False	NA	19	True	AGTAAA	-12	NA	78163672	78181447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78169942_78170534_78170742_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.114	chr11	+	3735	21	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	373	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	169.017040561004	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAATTTGATGTTGGCC	NA	False	NA	-34	True	AAAAAG	-19	NA	78164349	78181394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78164386_78164507_78164729_78165290_78165475_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.116	chr11	+	2997	16	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	3887	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	192.559831971491	854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	2187	False	NA	-23	True	AAAAAG	-30	NA	78167863	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78168161_78169872_78170031_78170534_78170735_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.117	chr11	+	6278	10	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-4508	-238	intron_retention	FALSE	canonical	3	663	junction_2	68.4478714870748	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTGCCTCACTCCA	6052	False	NA	66	True	NA	NA	NA	78171728	78181211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.118	chr11	+	4431	1	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-3483	-1625	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	811	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAAAGGACCCATAGCT	7077	False	NA	NA	False	NA	NA	NA	78172753	78177184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78172800_78177200
ES.5613.119	chr11	+	1723	12	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	22500	411	-1159	-411	3prime_fragment	FALSE	canonical	3	663	junction_4	63.5756853568645	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTGTCCAAGCCTAGT	9401	False	NA	NA	False	AAGAAA	-15	NA	78175077	78181038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.120	chr11	+	3331	9	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-671	-2	intron_retention	TRUE	canonical	1	1	junction_6	257.470872138966	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCCTTCCCTCCT	9889	False	NA	19	True	AGTAAA	-12	NA	78175565	78181447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78175687_78176263_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179380_78179590_78179869_78180111_78180247_78180629
ES.5613.121	chr11	+	1332	5	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	26178	-6	-10	6	3prime_fragment	FALSE	canonical	3	753	junction_1	43.9118435049133	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCCTCCTCACTAACC	18	True	NA	27	True	AGTAAA	-20	NA	78178755	78181455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.122	chr11	+	2970	2	NIC	ENSMUSG00000037593.13	novel	1348	8	NA	NA	665	3	intron_retention	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTAGAGTTGGTTTTG	4051	False	NA	NA	False	ATTAAA	-25	NA	78183046	78186171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78183625_78183779
ES.5613.16	chr11	+	7309	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	135.443615544217	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152558	78181449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162269_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.18	chr11	+	7407	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-14	50	-14	-50	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGATGTTGGCCTTTTT	NA	False	NA	-29	True	AAAAAG	-24	NA	78152563	78181399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.2	chr11	+	7308	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-103	238	-103	-238	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTGCCTCACTCCA	NA	False	NA	66	True	NA	NA	NA	78152474	78181211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.20	chr11	+	7382	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-11	-279	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	132.0980497087	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTCCCTTTGTGCCAA	NA	False	NA	25	True	NA	NA	NA	78152566	78181170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.21	chr11	+	6780	35	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-11	-43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	141.600209664967	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152566	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.24	chr11	+	7603	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-9	-57	intron_retention	FALSE	canonical	0	0	junction_25	167.923997202797	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAATTTGATGTTGG	NA	False	NA	-36	True	AAAAAG	-17	NA	78152568	78181392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78172053_78172135_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.27	chr11	+	7353	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-7	-46	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_6	134.275745247505	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGGCCTTTTTTAAT	NA	False	NA	-25	True	AAAAAG	-28	NA	78152570	78181403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156449_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.28	chr11	+	7352	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-7	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	134.937443185378	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152570	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175054_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.29	chr11	+	7287	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-5	-288	intron_retention	FALSE	canonical	3	514	junction_1	89.0858533227089	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTAATTGCTCTCCCT	NA	False	NA	16	True	NA	NA	NA	78152572	78181161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.3	chr11	+	7591	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-97	-51	-97	51	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTGGTCTTGTCTTTC	NA	False	NA	72	True	NA	NA	NA	78152480	78181500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.30	chr11	+	8292	36	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	0	-1	intron_retention	FALSE	canonical	3	18	junction_4	136.224856133422	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTTCCCTCCTC	NA	False	NA	20	True	AGTAAA	-13	NA	78152577	78181448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78164126_78164266_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.32	chr11	+	7478	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	0	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	133.910345415947	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTCCTCACTAACCCA	NA	False	NA	29	True	AGTAAA	-22	NA	78152577	78181457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175714_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.33	chr11	+	7462	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	134.906431100799	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152578	78181449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157566_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.34	chr11	+	6951	38	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	3	872	3	41	5prime_fragment	FALSE	canonical	3	514	junction_1	84.8571523436383	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCCCGTTTCACTAATT	NA	False	NA	NA	False	AATAAA	-27	NA	78152580	78180577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111
ES.5613.35	chr11	+	7413	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	3	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	135.236381232508	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGGCCTTTTTTAAT	NA	False	NA	-25	True	AAAAAG	-28	NA	78152580	78181403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178102_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.36	chr11	+	8180	38	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	3	-44	intron_retention	FALSE	canonical	3	18	junction_4	132.344686871707	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152580	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.39	chr11	+	3544	19	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	4	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	167.302786056366	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152581	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78162634_78179823_78179869_78180111_78180247_78180629
ES.5613.4	chr11	+	7657	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-66	21	intron_retention	FALSE	canonical	3	514	junction_1	89.0858533227089	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCCAACACATTTTTTAA	NA	False	NA	42	True	AGTAAA	-35	NA	78152511	78181470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.40	chr11	+	7389	38	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	4	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	136.901744529508	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152581	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157861_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.41	chr11	+	7107	37	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	5	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	136.779591444786	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGGCCTTTTTTA	NA	False	NA	-27	True	AAAAAG	-26	NA	78152582	78181401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178842_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.44	chr11	+	7359	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	5	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	134.383510810811	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152582	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158960_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.45	chr11	+	7224	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	8	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	136.950477045144	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGTCTGTGTCCTTC	NA	False	NA	13	True	AGTAAA	-6	NA	78152585	78181441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.47	chr11	+	7251	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	10	-43	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	134.048602009984	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152587	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156450_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.50	chr11	+	7312	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	135.236381232508	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTTCCCTCCTC	NA	False	NA	20	True	AGTAAA	-13	NA	78152590	78181448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177403_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.51	chr11	+	7340	40	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	133.711736217756	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152590	78181449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159546_78159635_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.52	chr11	+	7411	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	13	-43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	134.945295164302	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152590	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160289_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.53	chr11	+	8342	34	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	13	-44	intron_retention	FALSE	canonical	1	1	junction_17	143.244446780729	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152590	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78164126_78164266_78164729_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.55	chr11	+	7180	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	13	-43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	136.919516435781	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152590	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.6	chr11	+	2425	15	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	-42	20622	-42	1821	5prime_fragment	FALSE	canonical	3	514	junction_1	41.813543846218	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCATGTCTGTGTAATA	NA	False	NA	NA	False	GATAAA	-18	NA	78152535	78160827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313
ES.5613.61	chr11	+	7946	37	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	20	2	intron_retention	FALSE	canonical	3	514	junction_1	89.0361280535347	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCTTCCCTCCTCACT	NA	False	NA	23	True	AGTAAA	-16	NA	78152597	78181451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.62	chr11	+	9355	49	Fusion	ENSMUSG00000037593.13_ENSMUSG00000010277.8	novel	7443	39	NA	NA	20	0	multi-exon	TRUE	canonical	0	0	junction_39	271.366007419203	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGATTTAGAGTTGGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	78152597	78186168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629_78181766_78182246_78182496_78182580_78182665_78182787_78182857_78183519_78183625_78183779_78183821_78184209_78184238_78184354_78184445_78184701_78184791_78184887_78184999_78185418
ES.5613.63	chr11	+	7120	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	20	-293	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	135.443615544217	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAAATGTAATTGCTC	NA	False	NA	11	True	NA	NA	NA	78152597	78181156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162126_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.65	chr11	+	6428	35	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	20	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	176.259913461415	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152597	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156449_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78162269_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.69	chr11	+	7314	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	24	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	134.988449798297	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTGGCCTTTTTTAA	NA	False	NA	-26	True	AAAAAG	-27	NA	78152601	78181402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164565_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.7	chr11	+	9575	49	Fusion	ENSMUSG00000037593.13_ENSMUSG00000010277.8	novel	7443	39	NA	NA	-39	0	multi-exon	TRUE	canonical	0	0	junction_39	271.4049576586	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGATTTAGAGTTGGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	78152538	78186168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629_78181766_78182249_78182496_78182580_78182665_78182787_78182857_78183519_78183625_78183779_78183821_78184045_78184238_78184354_78184445_78184701_78184791_78184887_78184999_78185418
ES.5613.70	chr11	+	7367	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	24	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	129.01007336821	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152601	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179861_78180111_78180247_78180629
ES.5613.71	chr11	+	7366	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	26	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	135.443615544217	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGCCTTTTTTAATT	NA	False	NA	-24	True	AAAAAG	-29	NA	78152603	78181404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162122_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.73	chr11	+	6973	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	31	-300	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	134.048602009984	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATTTCTAAATGTA	NA	False	NA	4	True	NA	NA	NA	78152608	78181149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156450_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.75	chr11	+	7372	40	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	133.711736217756	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCCTTCCCTCCT	NA	False	NA	19	True	AGTAAA	-12	NA	78152610	78181447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78174986_78175021_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.76	chr11	+	7306	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	134.341422236523	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTTCCCTCCTC	NA	False	NA	20	True	AGTAAA	-13	NA	78152610	78181448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157282_78157504_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.79	chr11	+	7221	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	37	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	163.646069341981	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152614	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178821_78178953_78179029_78179778_78179869_78180111_78180247_78180629
ES.5613.8	chr11	+	7874	39	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-39	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_1	133.250823096729	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152538	78181449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78153136_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.80	chr11	+	9402	50	Fusion	ENSMUSG00000037593.13_ENSMUSG00000010277.8	novel	7443	39	NA	NA	40	0	multi-exon	FALSE	canonical	0	0	junction_39	278.126612046019	859	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGATTTAGAGTTGGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	78152617	78186168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629_78181766_78182249_78182496_78182580_78182665_78182787_78182857_78183230_78183301_78183519_78183625_78183779_78183821_78184209_78184238_78184354_78184445_78184701_78184791_78184887_78184999_78185418
ES.5613.82	chr11	+	7081	37	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	41	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	189.249449580882	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152618	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164503_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179764_78179869_78180111_78180247_78180629
ES.5613.84	chr11	+	7361	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	43	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	135.438154769301	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGGCCTTTTTTAAT	NA	False	NA	-25	True	AAAAAG	-28	NA	78152620	78181403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155416_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.85	chr11	+	7471	40	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	43	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.876719591877	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGCCTTTTTTAATT	NA	False	NA	-24	True	AAAAAG	-29	NA	78152620	78181404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78154976_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.86	chr11	+	7378	40	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	44	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.876719591877	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGGCCTTTTTTAAT	NA	False	NA	-25	True	AAAAAG	-28	NA	78152621	78181403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155067_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.87	chr11	+	7347	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	44	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	135.294500259818	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78152621	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164132_78164280_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.88	chr11	+	6996	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	48	-309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	131.877272334731	855	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACATATATATATATTT	NA	False	NA	-5	True	NA	NA	NA	78152625	78181140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180719
ES.5613.90	chr11	+	7270	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	69	-43	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	136.914693546692	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTTTTTTAATTGT	NA	False	NA	-22	True	AAAAAG	-31	NA	78152646	78181406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.91	chr11	+	7245	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	226	53	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	133.618404856305	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTCTTGTCTTTCTC	NA	False	NA	74	True	NA	NA	NA	78153523	78181502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159546_78159631_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.92	chr11	+	7138	37	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	1837	10	1117	-10	3prime_fragment	FALSE	canonical	3	517	junction_2	87.1610321456289	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAAGTTGTCTGTGTCCT	NA	False	NA	11	True	AGTAAA	-4	NA	78154414	78181439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.93	chr11	+	6826	34	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	-956	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	142.130354425856	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAAGTTGTCTGTGTCCT	NA	False	NA	11	True	AGTAAA	-4	NA	78156002	78181439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157918_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.95	chr11	+	6409	31	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	461	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	184.013175856755	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGGCCTTTTTTAATTG	NA	False	NA	-23	True	AAAAAG	-30	NA	78157419	78181405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168157_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178210_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.96	chr11	+	6332	30	ISM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	5182	0	801	0	3prime_fragment	FALSE	canonical	3	521	junction_2	84.1360090227052	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78157759	78181449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5613.98	chr11	+	6064	28	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	1964	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	149.998088693813	857	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTGGCCTTTTTTA	NA	False	NA	-27	True	AAAAAG	-26	NA	78158922	78181401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178203_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ES.5614.1	chr11	-	3233	17	Antisense	novelGene_ENSMUSG00000010277.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCGCGGCGGGCTTCGGC	3092	False	NA	NA	False	NA	NA	NA	78163697	78152606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78152743_78153523_78153654_78154414_78154466_78154737_78154886_78155289_78155407_78156002_78156063_78156396_78156586_78157173_78157300_78157419_78157544_78157759_78157834_78157925_78158067_78158922_78159040_78159148_78159314_78159462_78159723_78160312_78160514_78162109_78163209_78163602
ES.5614.2	chr11	-	2601	5	Antisense	novelGene_ENSMUSG00000010277.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9135	False	NA	NA	False	NA	NA	NA	78157654	78153304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78153654_78154414_78154466_78154737_78155407_78156002_78157300_78157419
ES.5615.1	chr11	+	7408	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	-3515	-6	-3515	6	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCACTGAATCTTATTTTG	19	False	NA	14	True	AATAAA	-24	NA	78188839	78213289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.10	chr11	+	4810	20	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-33	-4	intron_retention	FALSE	canonical	3	134	junction_7	25.4370114448718	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2814	False	NA	4	True	AATAAA	-14	NA	78192416	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205083_78205168_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.11	chr11	+	4738	20	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-33	-3	intron_retention	FALSE	canonical	1	2	junction_18	42.5692201497176	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2814	False	NA	5	True	AATAAA	-15	NA	78192416	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212484_78212593_78212953
ES.5615.12	chr11	+	4611	20	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	128	junction_9	27.3154345378015	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2815	False	NA	5	True	AATAAA	-15	NA	78192417	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205283_78205530_78205625_78205786_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.13	chr11	+	4500	21	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-31	-3	intron_retention	FALSE	canonical	3	128	junction_9	26.2842157957965	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2816	False	NA	5	True	AATAAA	-15	NA	78192418	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.14	chr11	+	3982	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-27	-4	intron_retention	FALSE	canonical	1	1	junction_2	42.9785887496215	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2820	False	NA	4	True	AATAAA	-14	NA	78192422	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194876_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.15	chr11	+	4110	22	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_7	43.6299113109084	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2824	False	NA	4	True	AATAAA	-14	NA	78192426	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204463_78204645_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.16	chr11	+	3906	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_11	43.4325971577543	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2824	False	NA	4	True	AATAAA	-14	NA	78192426	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205770_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.17	chr11	+	4179	23	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-21	-4	intron_retention	FALSE	canonical	3	128	junction_10	26.3523486807483	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2826	False	NA	4	True	AATAAA	-14	NA	78192428	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.18	chr11	+	5071	18	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-21	-4	intron_retention	FALSE	canonical	3	136	junction_7	25.5808643880024	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2826	False	NA	4	True	AATAAA	-14	NA	78192428	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78205625_78205786_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.19	chr11	+	3802	24	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	42.2835866657886	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTTCCAGTCCACTG	2826	False	NA	2	True	AATAAA	-12	NA	78192428	78213277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194876_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.2	chr11	+	272	1	Intergenic	novelGene_4428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	221	False	NA	NA	False	TATAAA	-45	NA	78189041	78189313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78189000_78189300
ES.5615.20	chr11	+	3797	24	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	42.2418547310048	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2826	False	NA	3	True	AATAAA	-13	NA	78192428	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204463_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.21	chr11	+	4587	22	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-21	-3	intron_retention	FALSE	canonical	3	128	junction_10	26.5965916013172	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2826	False	NA	5	True	AATAAA	-15	NA	78192428	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.22	chr11	+	5340	15	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-19	-3	intron_retention	FALSE	canonical	1	2	junction_1	52.4188877783416	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2828	False	NA	5	True	AATAAA	-15	NA	78192430	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78194871_78196147_78203940_78204016_78204173_78204267_78204338_78205283_78205530_78205625_78205786_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.23	chr11	+	3867	22	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-19	-4	intron_retention	FALSE	canonical	3	8	junction_14	42.7104367326733	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2828	False	NA	4	True	AATAAA	-14	NA	78192430	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.24	chr11	+	2959	3	ISM	ENSMUSG00000002055.10	ENSMUST00000146068.8	2402	9	-48	8089	-17	-7310	intron_retention	FALSE	canonical	3	156	junction_1	6	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAACAAACTCGTTCT	2830	False	NA	NA	False	NA	NA	NA	78192432	78197600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78192537_78192720_78192847_78194871
ES.5615.25	chr11	+	4636	19	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-15	-2	intron_retention	FALSE	canonical	0	0	junction_10	46.6192881186678	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGTCCACTGAATC	2832	False	NA	6	True	AATAAA	-16	NA	78192434	78213281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78205625_78205786_78205935_78206013_78206117_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.26	chr11	+	3707	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	52.8311867888718	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2834	False	NA	3	True	AATAAA	-13	NA	78192436	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211977_78212095_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.27	chr11	+	4096	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_3	54.4968723039138	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2838	False	NA	3	True	AATAAA	-13	NA	78192440	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78196329_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205770_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.28	chr11	+	4446	21	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	128	junction_9	26.5749412040742	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2846	False	NA	3	True	AATAAA	-13	NA	78192448	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.29	chr11	+	3709	23	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_22	35.4896097005055	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2846	False	NA	5	True	AATAAA	-15	NA	78192448	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212953
ES.5615.32	chr11	+	3885	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	-4	intron_retention	FALSE	canonical	1	1	junction_2	43.2171386648881	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2847	False	NA	4	True	AATAAA	-14	NA	78192449	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194876_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.33	chr11	+	4580	20	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_7	45.1645805380727	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGTCCACTGAATC	2847	False	NA	6	True	AATAAA	-16	NA	78192449	78213281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204544_78204645_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.34	chr11	+	4275	21	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	44.6781825950877	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2847	False	NA	5	True	AATAAA	-15	NA	78192449	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194867_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.35	chr11	+	3084	16	ISM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	95	2544	0	15	5prime_fragment	FALSE	canonical	3	128	junction_10	12.3605105971486	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCATGTGGTTCAGG	2847	False	NA	NA	False	NA	NA	NA	78192449	78210739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292
ES.5615.36	chr11	+	3701	23	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	42.4365593592121	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCCACTGAATCTTAT	2847	False	NA	10	True	AATAAA	-20	NA	78192449	78213285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.37	chr11	+	4702	17	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	-5	intron_retention	FALSE	canonical	3	8	junction_9	47.3042017161267	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2847	False	NA	3	True	AATAAA	-13	NA	78192449	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205625_78205786_78206469_78206725_78206868_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.38	chr11	+	4230	21	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	0	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	65.1900299125564	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTCCTTCCAGTCCAC	2847	False	NA	0	True	AATAAA	-10	NA	78192449	78213275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194876_78196329_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205283_78205530_78205625_78205786_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211866_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.39	chr11	+	3724	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	1	-6	intron_retention	FALSE	non_canonical	0	0	junction_12	43.4255323456619	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTTCCAGTCCACTG	2848	False	NA	2	True	AATAAA	-12	NA	78192450	78213277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206046_78206426_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.4	chr11	+	3819	24	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-38	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	42.2379164720716	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2809	False	NA	3	True	AATAAA	-13	NA	78192411	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211874_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.40	chr11	+	4576	20	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	2	-4	intron_retention	FALSE	canonical	3	128	junction_8	26.7566234324686	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2849	False	NA	4	True	AATAAA	-14	NA	78192451	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205283_78205530_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.42	chr11	+	9420	13	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	10	-5	intron_retention	FALSE	canonical	1	1	junction_2	56.0289483709587	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2857	False	NA	3	True	AATAAA	-13	NA	78192459	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194876_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.43	chr11	+	4410	20	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-10	-5	intron_retention	FALSE	canonical	3	128	junction_7	25.6875537082157	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2868	False	NA	3	True	AATAAA	-13	NA	78192470	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205283_78205530_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.44	chr11	+	4257	22	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	10	-4	intron_retention	FALSE	canonical	0	0	junction_7	41.1407627332873	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2888	False	NA	4	True	AATAAA	-14	NA	78192490	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204544_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511
ES.5615.45	chr11	+	3795	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	134	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.1866982888355	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	3012	False	NA	3	True	AATAAA	-13	NA	78192614	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204463_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.46	chr11	+	4165	19	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	2541	-5	intron_retention	FALSE	canonical	3	134	junction_6	26.4617123826525	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	208	False	NA	3	True	AATAAA	-13	NA	78195021	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.48	chr11	+	3600	18	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	3094	-4	intron_retention	FALSE	canonical	0	0	junction_11	47.5762727638873	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	761	False	NA	4	True	AATAAA	-14	NA	78195574	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211159_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.49	chr11	+	3751	17	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	3100	-4	intron_retention	FALSE	canonical	0	0	junction_6	49.1127529263021	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	767	False	NA	4	True	AATAAA	-14	NA	78195580	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78205935_78206013_78206117_78206341_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.5	chr11	+	4232	23	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-37	-4	intron_retention	FALSE	canonical	3	128	junction_10	26.1710836580129	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	2810	False	NA	4	True	AATAAA	-14	NA	78192412	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.50	chr11	+	683	1	Intergenic	novelGene_4429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTTTGAGACAGGATC	1995	False	NA	NA	False	AATAAA	-20	NA	78196808	78197491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78196800_78197500
ES.5615.51	chr11	+	2297	18	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	407	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.7999943275282	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCAGTCCACTGAATC	9534	False	NA	6	True	AATAAA	-16	NA	78204347	78213281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78204544_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.52	chr11	+	3245	4	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	206	-4	intron_retention	FALSE	canonical	3	163	junction_1	26.7124606795322	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	NA	False	NA	4	True	AATAAA	-14	NA	78206388	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78206868_78210292_78211279_78211386_78212399_78212511
ES.5615.53	chr11	+	4791	2	FSM	ENSMUSG00000002055.10	ENSMUST00000125477.2	707	2	-2373	-1711	-409	-6	multi-exon	FALSE	canonical	3	189	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCTTCCAGTCCACTG	NA	False	NA	2	True	AATAAA	-12	NA	78208378	78213277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78211279_78211386
ES.5615.54	chr11	+	981	4	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	703	-4	intron_retention	FALSE	canonical	3	180	junction_1	23.3666428910958	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	NA	False	NA	4	True	AATAAA	-14	NA	78211454	78213279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78211499_78211868_78212399_78212511_78212593_78212953
ES.5615.6	chr11	+	3987	23	NNC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-37	-5	intron_retention	FALSE	canonical	0	0	junction_6	68.1672257111658	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2810	False	NA	3	True	AATAAA	-13	NA	78192412	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78192537_78192720_78192847_78194871_78196147_78203940_78204016_78204173_78204267_78204338_78204463_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205770_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211357_78211499_78211868_78211977_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.7	chr11	+	4457	20	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-37	-3	intron_retention	FALSE	canonical	3	134	junction_8	26.3019963852635	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCAGTCCACTGAAT	2810	False	NA	5	True	AATAAA	-15	NA	78192412	78213280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205625_78205786_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5615.8	chr11	+	4162	19	NIC	ENSMUSG00000002055.10	novel	3887	24	NA	NA	-37	-5	intron_retention	FALSE	canonical	0	0	junction_3	58.5008441429019	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCTTCCAGTCCACTGA	2810	False	NA	3	True	AATAAA	-13	NA	78192412	78213278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78192537_78192720_78192847_78194871_78195867_78203940_78204016_78204173_78204267_78204338_78204766_78204989_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210811_78210899_78211157_78211279_78211386_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ES.5616.1	chr11	-	164	1	Intergenic	novelGene_4430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	78212846	78212682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78212700_78212800
ES.5617.1	chr11	+	1437	8	NIC	ENSMUSG00000017390.16	novel	2786	9	NA	NA	-74	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	55.6079571460702	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACACCGCTCTGTCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	78213919	78217584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78217087
ES.5617.10	chr11	+	2332	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	22	-7	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGACCATAACTCG	NA	False	NA	21	True	NA	NA	NA	78219262	78233601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ES.5617.12	chr11	+	2985	2	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	31	-7489	intron_retention	FALSE	canonical	3	600	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78219271	78226119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219913_78223775
ES.5617.13	chr11	+	3583	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	31	-2	intron_retention	FALSE	canonical	3	527	junction_7	34.0270480647381	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACCATAACTCGTTCTT	NA	False	NA	26	True	NA	NA	NA	78219271	78233606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78232262_78232559
ES.5617.14	chr11	+	3866	10	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	34	-12	intron_retention	FALSE	canonical	1	4	junction_1	178.790241952082	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGATATGGATGACCATA	NA	False	NA	16	True	NA	NA	NA	78219274	78233596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219335_78219559_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834
ES.5617.15	chr11	+	2249	5	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	38	-7492	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	243.790253086542	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78219278	78226116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224265
ES.5617.16	chr11	+	2681	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	38	7460	38	-7460	intron_retention	FALSE	canonical	3	545	junction_2	23.7627158941622	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	78219278	78226148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775
ES.5617.18	chr11	+	2054	5	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	38	7460	38	-7460	5prime_fragment	FALSE	canonical	3	545	junction_2	21.856063231973	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	78219278	78226148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492
ES.5617.19	chr11	+	2470	12	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	43	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	163.328599470389	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCGTTCTTGTGTGAGA	NA	False	NA	34	True	NA	NA	NA	78219283	78233614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230321_78230834_78230936_78232050_78232262_78232559
ES.5617.2	chr11	+	1638	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	127	1021	-73	0	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGCTCTGTCTGTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	78213920	78217586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ES.5617.20	chr11	+	3976	9	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	43	-84	intron_retention	FALSE	canonical	3	77	junction_1	169.266801234028	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGTGTTCTGTATAT	NA	False	NA	-56	True	NA	NA	NA	78219283	78233524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219800_78219913_78223775_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78232262_78232559
ES.5617.21	chr11	+	2420	12	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	45	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	166.875169854744	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGATATGGATGACCA	NA	False	NA	14	True	NA	NA	NA	78219285	78233594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232072_78232262_78232559
ES.5617.22	chr11	+	2224	12	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	45	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	163.587669522598	426	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGACCATAACTCG	NA	False	NA	21	True	NA	NA	NA	78219285	78233601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232784
ES.5617.23	chr11	+	1444	9	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	48	-2282	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	165.203662187011	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTTGTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	78219288	78231326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834
ES.5617.24	chr11	+	4181	10	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	48	-14	intron_retention	FALSE	canonical	3	527	junction_6	35.2139843152976	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGATATGGATGACCA	NA	False	NA	14	True	NA	NA	NA	78219288	78233594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78232262_78232559
ES.5617.25	chr11	+	3420	10	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	51	-5	intron_retention	FALSE	canonical	3	77	junction_1	159.964888122671	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATGACCATAACTCGTT	NA	False	NA	23	True	NA	NA	NA	78219291	78233603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78232262_78232559
ES.5617.27	chr11	+	2203	10	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	52	-14	combination_of_known_splicesites	FALSE	canonical	1	10	junction_3	222.756856873028	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGATATGGATGACCA	NA	False	NA	14	True	NA	NA	NA	78219292	78233594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ES.5617.28	chr11	+	2453	12	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	52	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	165.872598726446	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGATATGGATGACCATA	NA	False	NA	16	True	NA	NA	NA	78219292	78233596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219351_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ES.5617.29	chr11	+	3801	8	NNC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	72	-2283	intron_retention	FALSE	non_canonical	0	0	junction_6	202.797878667004	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGGTCTTGTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78219312	78231325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78219698_78219800_78219913_78223775_78224585_78226252_78226461_78227513_78227657_78228614_78229297_78229343_78230315_78230834
ES.5617.3	chr11	+	3243	4	NIC	ENSMUSG00000017390.16	novel	1700	8	NA	NA	-61	1	intron_retention	FALSE	canonical	3	142	junction_3	11.5758369027902	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCTCTGTCTGTCTGTC	NA	False	NA	19	True	AATAAA	-19	NA	78213932	78217587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78215340_78215429_78215642_78215734_78216239_78216467
ES.5617.30	chr11	+	6218	1	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	690	-7460	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	78219930	78226148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78219900_78226100
ES.5617.31	chr11	+	1613	5	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	9371	12	9371	-12	3prime_fragment	FALSE	canonical	3	513	junction_3	52.0402488464458	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGATATGGATGACCATA	NA	False	NA	16	True	NA	NA	NA	78228611	78233596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ES.5617.32	chr11	+	1350	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	11593	12	11593	-12	3prime_fragment	FALSE	canonical	3	513	junction_1	54.5	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGATATGGATGACCATA	NA	False	NA	16	True	NA	NA	NA	78230833	78233596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78230936_78232050_78232262_78232559
ES.5617.4	chr11	+	1761	7	NIC	ENSMUSG00000017390.16	novel	2786	9	NA	NA	-28	-10	intron_retention	FALSE	canonical	3	130	junction_3	20.2436546985853	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCACACCGCTCT	NA	False	NA	8	True	AATAAA	-8	NA	78213965	78217576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78214049_78215215_78215340_78215429_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ES.5617.5	chr11	+	1893	9	NIC	ENSMUSG00000017390.16	novel	2786	9	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	48.9387372129686	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCACACCGCTCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	78213988	78217581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78214049_78214887_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ES.5617.6	chr11	+	6851	13	Fusion	ENSMUSG00000041958.11_ENSMUSG00000017390.16	novel	2501	12	NA	NA	4	-9	intron_retention	TRUE	non_canonical	0	0	junction_4	223.764183287277	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGGATGACCATAACT	NA	False	NA	19	True	NA	NA	NA	78216158	78233599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78216239_78216467_78216643_78216760_78216961_78217087_78218689_78218902_78219698_78219800_78219913_78223775_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78232262_78232559
ES.5617.7	chr11	+	866	3	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	1440	10	311	-10	3prime_fragment	FALSE	canonical	3	135	junction_1	13.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGCACACCGCTCT	NA	False	NA	8	True	AATAAA	-8	NA	78216465	78217576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78216643_78216760_78216961_78217087
ES.5617.8	chr11	+	180	1	Intergenic	novelGene_4431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78218687	78218867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78218700_78218900
ES.5617.9	chr11	+	2479	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	21	1	21	-1	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCATAACTCGTTCTTG	NA	False	NA	27	True	NA	NA	NA	78219261	78233607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ES.5618.1	chr11	-	2366	1	Antisense	novelGene_ENSMUSG00000041958.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAATACCAAAAAAAAAAA	4477	False	NA	NA	False	NA	NA	NA	78229113	78226747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78226700_78229100
ES.5618.2	chr11	-	1010	1	Antisense	novelGene_ENSMUSG00000041958.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	4870	False	NA	NA	False	NA	NA	NA	78228720	78227710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78227700_78228700
ES.5619.1	chr11	+	1351	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	-23	1	-23	-1	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTGTCTATAGGGA	NA	False	NA	18	True	AATAAA	-25	NA	78234284	78239989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
ES.5619.2	chr11	+	1105	5	NNC	ENSMUSG00000002058.14	novel	1329	5	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	102.793482283655	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGGCCAGCCTGTGTGTC	NA	False	NA	10	True	AATAAA	-17	NA	78234308	78239981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78234399_78238043_78238158_78238622_78238726_78238912_78239086_78239356
ES.5619.3	chr11	+	1276	5	NNC	ENSMUSG00000002058.14	novel	1329	5	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	111.306727110269	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGGCCAGCCTGTGTGTC	NA	False	NA	10	True	AATAAA	-17	NA	78234309	78239981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239044_78239356
ES.5619.4	chr11	+	1213	4	NIC	ENSMUSG00000002058.14	novel	1329	5	NA	NA	3	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	131.416217500818	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCGGCCAGCCTGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	78234310	78239980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78234613_78238043_78238158_78238912_78239086_78239356
ES.5619.5	chr11	+	1765	3	ISM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	-3	1	-3	-1	intron_retention	FALSE	canonical	3	255	junction_2	17.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTGTCTATAGGGA	NA	False	NA	18	True	AATAAA	-25	NA	78234328	78239989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78234613_78238043_78238158_78238622
ES.5619.6	chr11	+	1355	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	6	10	6	-10	multi-exon	FALSE	canonical	3	22	junction_4	104.920207777148	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCGGCCAGCCTGTGTGT	NA	False	NA	9	True	AATAAA	-16	NA	78234337	78239980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
ES.5619.7	chr11	+	1281	5	NNC	ENSMUSG00000002058.14	novel	1329	5	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.739914642402	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGTGTCTATAGGG	NA	False	NA	17	True	AATAAA	-24	NA	78234342	78239988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78234613_78238043_78238158_78238622_78238715_78238912_78239086_78239356
ES.5619.8	chr11	+	3993	4	ISM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	761	6	698	-6	3prime_fragment	FALSE	canonical	3	235	junction_2	12.8322510366134	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCAGCCTGTGTGTCTAT	NA	False	NA	13	True	AATAAA	-20	NA	78235068	78239984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78238158_78238622_78238726_78238912_78239086_78239356
ES.5619.9	chr11	+	956	2	ISM	ENSMUSG00000002058.14	ENSMUST00000100755.4	933	5	1264	-177	-5	-8	3prime_fragment	FALSE	canonical	3	266	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCAGCCTGTGTGTCT	NA	False	NA	11	True	AATAAA	-18	NA	78238755	78239982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78239086_78239356
ES.562.1	chr1	+	232	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGATACTGTGCTGGT	2637	False	NA	NA	False	NA	NA	NA	59700704	59700936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59700700_59700900
ES.5620.1	chr11	-	2674	1	Antisense	novelGene_ENSMUSG00000002058.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	8175	False	NA	NA	False	NA	NA	NA	78238034	78235360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78235400_78238000
ES.5621.1	chr11	-	160	1	Intergenic	novelGene_4432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	939	False	NA	NA	False	NA	NA	NA	78245270	78245110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78245100_78245300
ES.5622.1	chr11	-	2883	12	FSM	ENSMUSG00000001095.6	ENSMUST00000001122.6	2412	12	-12	-459	-12	459	multi-exon	FALSE	canonical	1	1	junction_6	4.88884714899955	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTACCAATCTATGAAGA	NA	False	NA	NA	False	AATATA	-24	NA	78313055	78287453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78288682_78289116_78289255_78289857_78290020_78290909_78291032_78291301_78291391_78291569_78291789_78293897_78294021_78294139_78294312_78295203_78295404_78295496_78295634_78297635_78297765_78312891
ES.5622.2	chr11	-	1268	5	NIC	ENSMUSG00000001095.6	novel	2412	12	NA	NA	21148	-216	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.04152298679729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGGGTGTGTTTCCCGG	9612	False	NA	NA	False	ATTAAA	-15	NA	78291895	78288128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78288682_78289116_78289255_78289857_78290020_78291301_78291391_78291569
ES.5623.1	chr11	-	176	2	Antisense	novelGene_ENSMUSG00000086380.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACAGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	78350838	78323043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_78323201_78350819
ES.5623.2	chr11	-	177	1	Intergenic	novelGene_4433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACAGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	78323220	78323043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78323000_78323200
ES.5624.1	chr11	+	1968	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	8	2	8	-2	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGCTTTGGGGCTTTC	8345	False	NA	24	True	AGTAAA	-25	NA	78356530	78362769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
ES.5624.2	chr11	+	3939	4	NIC	ENSMUSG00000020829.10	novel	1978	5	NA	NA	16	-9	intron_retention	FALSE	canonical	3	60	junction_1	12.675435561221	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTACTGGGCTTTGG	8353	False	NA	17	True	AGTAAA	-18	NA	78356538	78362762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78356832_78357176_78358030_78359450_78361678_78362196
ES.5624.3	chr11	+	1603	6	NNC	ENSMUSG00000020829.10	novel	1978	5	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	33.5022387311654	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGGCTTTGGGGCTTTC	8357	False	NA	24	True	AGTAAA	-25	NA	78356542	78362769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196_78362334_78362686
ES.5624.4	chr11	+	3704	3	NIC	ENSMUSG00000020829.10	novel	749	4	NA	NA	-24	-11	intron_retention	FALSE	canonical	3	90	junction_1	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGTTTACTGGGCTTT	8366	False	NA	15	True	AGTAAA	-16	NA	78356551	78362760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78359535_78361520_78361678_78362196
ES.5624.5	chr11	+	5683	2	NIC	ENSMUSG00000020829.10	novel	749	4	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	91	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGCTTTGGGGCTTTCT	8383	False	NA	25	True	AGTAAA	-26	NA	78356568	78362770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78361678_78362196
ES.5624.6	chr11	+	5325	3	NIC	ENSMUSG00000020829.10	novel	1978	5	NA	NA	-4	-11	intron_retention	FALSE	canonical	3	60	junction_1	15.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGTTTACTGGGCTTT	8386	False	NA	15	True	AGTAAA	-16	NA	78356571	78362760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78356832_78357176_78361678_78362196
ES.5625.1	chr11	+	2293	9	Antisense	novelGene_ENSMUSG00000050132.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAACAGGATCCGGTAAAG	4962	False	NA	NA	False	NA	NA	NA	78365715	78388385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_78365861_78366033_78366154_78373981_78374173_78374259_78374363_78378048_78378283_78378387_78378479_78378735_78378952_78381389_78382011_78387813
ES.5626.1	chr11	-	3188	1	Genic_Genomic	ENSMUSG00000050132.14	novel	NA	NA	NA	NA	10336	2055	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGGTTGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	78364288	78361100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_78361100_78364300
ES.5626.2	chr11	-	5254	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	-21	-2736	-21	1853	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCATGTGTGTGTTTTGC	4392	False	NA	NA	False	ATTAAA	-27	NA	78374645	78361302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
ES.5626.3	chr11	-	3811	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	-24	-1290	-24	407	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTACTGTGACAATTGC	4389	False	NA	NA	False	AGTAAA	-20	NA	78374648	78362748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
ES.5626.4	chr11	-	3389	8	ISM	ENSMUSG00000050132.14	ENSMUST00000061174.7	4083	9	6497	0	-3962	0	3prime_fragment	FALSE	canonical	1	1	junction_5	33.584495937068	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTCTGTCTTCAGTC	4618	False	NA	-2	True	AATACA	-20	NA	78382083	78364116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259_78374363_78378048_78378285_78378389_78378482_78378741_78378955_78381392
ES.5627.1	chr11	+	175	1	Intergenic	novelGene_4434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5432	False	NA	NA	False	NA	NA	NA	78399931	78400106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78399900_78400100
ES.5628.1	chr11	-	1364	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	-12	-5	-12	5	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGGTCTTAAAACACA	1619	False	NA	-24	True	AATAAA	-26	NA	78403010	78397875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
ES.5628.2	chr11	-	3069	3	FSM	ENSMUSG00000051232.14	ENSMUST00000148393.2	562	3	-49	-2458	40	-1	multi-exon	FALSE	canonical	3	479	junction_2	29	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCTTTGGTCTTAA	1671	False	NA	-30	True	AATAAA	-20	NA	78402958	78397881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78400641_78401173_78401248_78402722
ES.5628.4	chr11	-	1207	4	NNC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	271.362406304845	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATCTTTGGTCTTA	1619	False	NA	-31	True	AATAAA	-19	NA	78403010	78397882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78398632_78399144_78399258_78399478_78399536_78402722
ES.5628.5	chr11	-	1534	5	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	30	-4	intron_retention	FALSE	canonical	3	479	junction_4	36.9425229241318	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTTATCTTTGGTCT	1661	False	NA	-33	True	AATAAA	-17	NA	78402968	78397884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78398632_78399144_78399522_78400550_78400641_78401173_78401248_78402722
ES.5628.6	chr11	-	2060	4	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	35	-6	intron_retention	FALSE	canonical	3	479	junction_3	42.6249796350554	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATTTTTATCTTTGGT	1666	False	NA	-35	True	AATAAA	-15	NA	78402963	78397886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78398632_78399144_78399522_78400550_78401248_78402722
ES.5628.7	chr11	-	2560	4	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	30	-7	intron_retention	FALSE	canonical	3	479	junction_3	42.5519290592879	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTATTTTTATCTTTGG	1661	False	NA	-36	True	AATAAA	-14	NA	78402968	78397887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78398632_78399144_78400641_78401173_78401248_78402722
ES.5628.8	chr11	-	3070	3	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	-36	-7	intron_retention	FALSE	canonical	3	479	junction_2	52	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTATTTTTATCTTTGG	1684	False	NA	-36	True	AATAAA	-14	NA	78402945	78397887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78398632_78399144_78401248_78402722
ES.5629.1	chr11	+	1496	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	3	555	3	10	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCTCCAGGGTCTC	1638	False	NA	25	True	AATAAA	-27	NA	78403021	78413007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.10	chr11	+	1225	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	66	763	66	-198	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTCCCTACTGTGAA	1701	False	NA	NA	False	NA	NA	NA	78403084	78412799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.11	chr11	+	1433	11	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	69	19	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	341.836232719705	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTCTCAGGCCCCCT	1704	False	NA	34	True	AATAAA	-36	NA	78403087	78413016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403293_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.12	chr11	+	1752	11	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	1705	False	NA	15	True	AATAAA	-17	NA	78403088	78412997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.13	chr11	+	2724	10	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	73	0	intron_retention	FALSE	canonical	3	1074	junction_8	51.6729984172788	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1708	False	NA	18	True	ATTAAA	-15	NA	78403091	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.14	chr11	+	5582	7	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	74	0	intron_retention	FALSE	canonical	3	1074	junction_5	53.3367186425595	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1709	False	NA	18	True	ATTAAA	-15	NA	78403092	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78407742_78408378_78408455_78408650_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.15	chr11	+	2158	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	74	-178	74	178	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACTTTATTAGAAGT	1709	False	NA	NA	False	NA	NA	NA	78403092	78413740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.16	chr11	+	4006	8	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	75	-2	intron_retention	FALSE	canonical	3	1074	junction_6	56.5761181317448	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1710	False	NA	16	True	ATTAAA	-13	NA	78403093	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78410132_78411977_78412058_78412619
ES.5629.17	chr11	+	3487	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	75	-1508	75	1508	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTCCCTCTTGGTATT	1710	False	NA	NA	False	ATTAAA	-19	NA	78403093	78415070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.18	chr11	+	3379	8	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	89	-2	intron_retention	FALSE	canonical	3	32	junction_1	395.421294317845	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1724	False	NA	16	True	ATTAAA	-13	NA	78403107	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78410132_78411977_78412058_78412619
ES.5629.2	chr11	+	2051	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	9	-6	9	6	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTGTTCTTAATCTTCC	1644	False	NA	24	True	ATTAAA	-21	NA	78403027	78413568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.20	chr11	+	2098	10	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	91	-2	intron_retention	FALSE	canonical	0	0	junction_9	367.262781421265	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1726	False	NA	16	True	ATTAAA	-13	NA	78403109	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78409036_78409778_78409806_78410005_78410132_78411977_78412055_78412619
ES.5629.22	chr11	+	1962	11	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	96	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	348.461246051839	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1731	False	NA	16	True	ATTAAA	-13	NA	78403114	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412064_78412619
ES.5629.23	chr11	+	1951	11	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	341.836232719705	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1732	False	NA	18	True	ATTAAA	-15	NA	78403115	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403293_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.25	chr11	+	1071	7	ISM	ENSMUSG00000001100.11	ENSMUST00000133601.2	1329	11	-120	3666	-92	-80	5prime_fragment	FALSE	canonical	3	1092	junction_3	49.3884826879934	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGATTGATTGTCACA	1738	False	NA	NA	False	AATATA	-19	NA	78403121	78409331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898
ES.5629.26	chr11	+	3584	10	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	-92	0	intron_retention	FALSE	canonical	3	1074	junction_8	48.5999034699036	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1738	False	NA	18	True	ATTAAA	-15	NA	78403121	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78404828_78405913_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.27	chr11	+	1361	10	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	-92	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	482.764723004672	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCACGGCCATTTTTGT	1738	False	NA	13	True	AATAAA	-15	NA	78403121	78412995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405917_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409038_78409999_78410132_78411977_78412058_78412619
ES.5629.28	chr11	+	1910	12	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	334.92816548188	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1739	False	NA	18	True	ATTAAA	-15	NA	78403122	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619_78413384_78413423
ES.5629.29	chr11	+	3843	11	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	-78	-2	intron_retention	FALSE	canonical	0	0	junction_3	469.584113870987	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1752	False	NA	16	True	ATTAAA	-13	NA	78403135	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407458_78407521_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78412058_78412619
ES.5629.3	chr11	+	1457	10	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	31	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	367.967087900233	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACGGCCATTTTTGTCTC	1666	False	NA	16	True	AATAAA	-18	NA	78403049	78412998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409980_78410132_78411977_78412058_78412619
ES.5629.31	chr11	+	2337	11	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	454.67396010768	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1754	False	NA	18	True	ATTAAA	-15	NA	78403137	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409709_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.32	chr11	+	2089	11	NIC	ENSMUSG00000001100.11	novel	794	4	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1933	False	NA	18	True	ATTAAA	-15	NA	78403316	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.33	chr11	+	4198	6	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	1248	-1	intron_retention	FALSE	canonical	3	1074	junction_4	55.4025270181785	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAGTATTGTTCTTA	3106	False	NA	17	True	ATTAAA	-14	NA	78404489	78413561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78406012_78407644_78407742_78408378_78408455_78408650_78410132_78411977_78412058_78412619
ES.5629.34	chr11	+	4291	7	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	1503	0	intron_retention	FALSE	canonical	3	1074	junction_5	47.0735240519197	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	28	False	NA	18	True	ATTAAA	-15	NA	78404744	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78404828_78405913_78407742_78408378_78408455_78408650_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.35	chr11	+	3406	6	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	1517	0	intron_retention	FALSE	canonical	3	1074	junction_5	58.4	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	42	False	NA	18	True	ATTAAA	-15	NA	78404758	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78410132_78411977
ES.5629.4	chr11	+	2002	10	NNC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	367.967087900233	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1681	False	NA	16	True	ATTAAA	-13	NA	78403064	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409982_78410132_78411977_78412058_78412619
ES.5629.7	chr11	+	2872	9	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	65	0	intron_retention	FALSE	canonical	3	1074	junction_7	53.5694642497011	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1700	False	NA	18	True	ATTAAA	-15	NA	78403083	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78409806_78410005_78410132_78411977_78412058_78412619
ES.5629.8	chr11	+	3070	8	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	65	-2	intron_retention	FALSE	canonical	3	1074	junction_6	56.3882315120915	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGAGTATTGTTCTT	1700	False	NA	16	True	ATTAAA	-13	NA	78403083	78413560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78410132_78411977_78412058_78412619
ES.5629.9	chr11	+	2932	9	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	65	0	intron_retention	FALSE	canonical	3	1074	junction_7	54.2448154204621	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1700	False	NA	18	True	ATTAAA	-15	NA	78403083	78413562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78410132_78411977_78412058_78412619
ES.563.1	chr1	+	4080	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAGAAAAAAAA	5987	False	NA	NA	False	AATAGA	-27	NA	59704054	59708134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59704100_59708100
ES.5630.1	chr11	+	1531	7	NNC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	-753	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.635125509354	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78426433	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78426620_78426746_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ES.5630.10	chr11	+	1441	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-27	-247	-10	-5	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427243	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
ES.5630.11	chr11	+	4087	2	NIC	ENSMUSG00000001105.16	novel	909	4	NA	NA	-10	12	intron_retention	FALSE	canonical	3	495	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427243	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78429789_78430785
ES.5630.12	chr11	+	1099	6	FSM	ENSMUSG00000001105.16	ENSMUST00000050366.15	735	6	-10	-354	-10	-7	multi-exon	FALSE	canonical	1	1	junction_2	183.589760063027	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTATGGTGCTGTGTGC	NA	False	NA	17	True	AATAAA	-26	NA	78427243	78432556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429335_78429565_78429637_78429789_78430785_78430872_78431720_78431825_78432186
ES.5630.13	chr11	+	1199	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	-16	-16	1	12	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427254	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
ES.5630.14	chr11	+	4941	2	NIC	ENSMUSG00000001105.16	novel	1167	5	NA	NA	5	-16	intron_retention	FALSE	canonical	3	281	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGCAAAAAAAAAAAAAAA	NA	False	NA	19	True	AATGAA	-26	NA	78427258	78432294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78429565_78429659
ES.5630.15	chr11	+	2368	3	NIC	ENSMUSG00000001105.16	novel	1167	5	NA	NA	7	-5	intron_retention	FALSE	canonical	3	238	junction_1	128.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427260	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78427403_78429335_78429789_78430785
ES.5630.16	chr11	+	2153	5	NNC	ENSMUSG00000001105.16	novel	1167	5	NA	NA	-7	-17	intron_retention	FALSE	canonical	0	0	junction_2	175.770446890255	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTCTTCTATGG	NA	False	NA	7	True	AATAAA	-16	NA	78427261	78432546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_78427403_78429335_78429429_78429535_78429565_78429659_78429789_78430785
ES.5630.17	chr11	+	2043	3	ISM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-7	-243	-7	-5	intron_retention	FALSE	canonical	3	256	junction_1	119.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427261	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78427403_78429659_78429789_78430785
ES.5630.18	chr11	+	1504	4	NIC	ENSMUSG00000001105.16	novel	1167	5	NA	NA	-6	-18	intron_retention	FALSE	canonical	3	238	junction_1	112.909993652762	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTCTTTCTTCTATG	NA	False	NA	6	True	AATAAA	-15	NA	78427262	78432545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78427403_78429335_78429789_78430785_78430872_78431720
ES.5630.19	chr11	+	1762	3	ISM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	7	24	5	-19	intron_retention	FALSE	canonical	3	256	junction_1	119.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAGGCAAAAAAAAAAAA	NA	False	NA	16	True	AATGAA	-23	NA	78427275	78432291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78427403_78429659_78429789_78430785
ES.5630.2	chr11	+	912	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-87	-243	-5	-5	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427181	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ES.5630.20	chr11	+	2171	5	ISM	ENSMUSG00000001105.16	ENSMUST00000050366.15	735	6	622	-125	577	12	3prime_fragment	FALSE	canonical	1	1	junction_1	199.683969061114	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427875	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78429565_78429637_78429789_78430785_78430872_78431720_78431825_78432186
ES.5630.21	chr11	+	1278	1	Genic_Genomic	ENSMUSG00000001105.16	novel	NA	NA	NA	NA	5103	1116	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCTCTGCCTCATCAC	NA	False	NA	NA	False	NA	NA	NA	78432401	78433679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_78432400_78433700
ES.5630.22	chr11	+	2997	1	Genic_Genomic	ENSMUSG00000001105.16	novel	NA	NA	NA	NA	5104	2836	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGCTGATATTTGTGG	NA	False	NA	NA	False	NA	NA	NA	78432402	78435399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_78432400_78435400
ES.5630.3	chr11	+	1035	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	-109	-17	3	12	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427189	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
ES.5630.4	chr11	+	2312	4	ISM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	24	16	24	-16	intron_retention	FALSE	canonical	3	238	junction_1	112.395136312327	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTTTCTTCTATGGT	NA	False	NA	8	True	AATAAA	-17	NA	78427210	78432547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785
ES.5630.5	chr11	+	1112	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	24	5	24	-5	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427210	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ES.5630.6	chr11	+	4338	2	NIC	ENSMUSG00000001105.16	novel	909	4	NA	NA	-30	-5	intron_retention	FALSE	canonical	3	495	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGGTGCTGTGTGCAT	NA	False	NA	19	True	AATAAA	-28	NA	78427223	78432558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78429789_78430785
ES.5630.7	chr11	+	5102	1	NIC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	-28	12	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427225	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78427200_78432300
ES.5630.8	chr11	+	3131	4	NIC	ENSMUSG00000001105.16	novel	1167	5	NA	NA	-28	-13	intron_retention	FALSE	canonical	3	281	junction_1	92.8989893498429	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	22	True	AATGAA	-29	NA	78427225	78432297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78429565_78429659_78429789_78430785_78430872_78431720
ES.5630.9	chr11	+	620	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	-26	-12	-11	12	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCACCCCAACCAAAAAAACA	NA	False	NA	52	True	NA	NA	NA	78427242	78432327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ES.5631.1	chr11	-	3768	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	2	-2	2	2	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTCCCTCCATGAC	NA	False	NA	16	True	NA	NA	NA	78427156	78413673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.10	chr11	-	3497	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	69	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.6833768195395	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427028	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78419981_78420853_78421174_78426911
ES.5631.11	chr11	-	3540	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	96	-56	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	59.9576239244574	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427001	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420051_78420853_78421174_78426911
ES.5631.12	chr11	-	5529	6	NIC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	105	-57	intron_retention	FALSE	canonical	3	137	junction_5	14.7431339951857	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTTTCCAGTGAGC	NA	False	NA	-43	True	AATAAA	-17	NA	78426992	78413732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.13	chr11	-	3690	8	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	82	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.545552192103	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTTTCCAGTGAGC	NA	False	NA	-43	True	AATAAA	-17	NA	78427015	78413732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78417461_78417584_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.14	chr11	-	6351	5	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	24	-58	intron_retention	FALSE	canonical	1	3	junction_1	68.8131528125256	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGTTTCCAGTGAG	NA	False	NA	-44	True	AATAAA	-16	NA	78427073	78413733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78418502_78419076_78419130_78419215_78419306_78419895_78421174_78426911
ES.5631.15	chr11	-	3683	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	43	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.6340693079235	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGTTTCCAGTGAG	NA	False	NA	-44	True	AATAAA	-16	NA	78427054	78413733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419383_78419895_78420066_78420853_78421174_78426911
ES.5631.16	chr11	-	3627	7	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	84	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.2595374219886	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATGTTTCCAGTGAG	NA	False	NA	-44	True	AATAAA	-16	NA	78427013	78413733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426849
ES.5631.18	chr11	-	3603	7	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	72	-63	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.980069585352	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGAGCCATGTTTCCA	NA	False	NA	-49	True	AATAAA	-11	NA	78427025	78413738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420084_78420853_78421174_78426898
ES.5631.19	chr11	-	2240	2	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	8646	552	8646	-552	3prime_fragment	FALSE	canonical	3	171	junction_1	0	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGCGGTGTTTCCAGT	3780	False	NA	NA	False	NA	NA	NA	78418451	78414227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78416368_78418351
ES.5631.2	chr11	-	3157	5	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	7031	-18	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	65.2188623022512	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGCTCAGTTCTTTT	2165	False	NA	-4	True	NA	NA	NA	78420066	78413693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419922
ES.5631.20	chr11	-	2458	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	131	1179	70	-1179	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTGAAAGACCTTTC	NA	False	NA	NA	False	AATACA	-19	NA	78427027	78414854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.21	chr11	-	2456	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	85	1179	85	-1179	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTGAAAGACCTTTC	NA	False	NA	NA	False	AATACA	-19	NA	78427012	78414854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ES.5631.22	chr11	-	2134	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	89	-1457	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	55.9871016891887	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427008	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419922_78420066_78420853_78421174_78426911
ES.5631.23	chr11	-	5354	5	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	82	-1457	intron_retention	FALSE	non_canonical	0	0	junction_3	64.6026315253489	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427015	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78418548_78419076_78419130_78419215_78419428_78419603_78421174_78426911
ES.5631.24	chr11	-	2242	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	69	1457	8	-1457	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427089	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.25	chr11	-	4093	6	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	56	-1457	intron_retention	FALSE	canonical	0	0	junction_4	63.6948977548438	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427041	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78418548_78419076_78419130_78419215_78419306_78419895_78419981_78420853_78421174_78426911
ES.5631.26	chr11	-	9610	5	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	68	-1457	intron_retention	TRUE	non_canonical	0	0	junction_3	84.7393061099747	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427029	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78419130_78419215_78419306_78419895_78422326_78422477_78423467_78424925
ES.5631.27	chr11	-	4150	6	NIC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	84	-1457	intron_retention	FALSE	canonical	3	137	junction_5	14.7431339951857	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427013	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.28	chr11	-	2244	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	77	-1457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.6833768195395	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427020	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420137_78420853_78421174_78426911
ES.5631.29	chr11	-	2291	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	-28	1457	-28	-1457	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427125	78415132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ES.5631.3	chr11	-	3575	8	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	137	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.545552192103	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTCCAGTGAGCAGA	NA	False	NA	-40	True	AATAAA	-20	NA	78426960	78413729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78417196_78417256_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.31	chr11	-	1686	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	90	1992	29	-1992	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTTTGTTTTTAAAT	NA	False	NA	NA	False	TTTAAA	-17	NA	78427068	78415667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ES.5631.4	chr11	-	3643	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	22	55	22	-55	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427075	78413730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ES.5631.5	chr11	-	3584	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	94	-56	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	60.3204406114176	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427003	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420093_78420853_78421174_78426911
ES.5631.6	chr11	-	3936	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	148	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.6833768195395	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78426949	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420499_78420853_78421174_78426911
ES.5631.7	chr11	-	3483	7	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	96	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.980069585352	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427001	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78419981_78420853_78421174_78426898
ES.5631.8	chr11	-	3686	7	NNC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	49	-56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	68.980069585352	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78427048	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420137_78420853_78421174_78426898
ES.5631.9	chr11	-	5050	6	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	4339	56	4339	-56	3prime_fragment	FALSE	canonical	3	147	junction_2	10.6770782520313	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTTTCCAGTGAGCA	NA	False	NA	-42	True	AATAAA	-18	NA	78422758	78413731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853
ES.5632.1	chr11	-	1752	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	29	-406	29	406	multi-exon	TRUE	canonical	3	1037	junction_2	9	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTTCTGCTTCTACT	NA	False	NA	NA	False	AATAAA	-15	NA	78441574	78432236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78433623_78434311_78434457_78441353
ES.5632.2	chr11	-	1365	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	9	1	9	-1	multi-exon	FALSE	canonical	3	1037	junction_2	9	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTGTTGTGTGGA	NA	False	NA	-8	True	AATAAA	-22	NA	78441594	78432643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78433623_78434311_78434457_78441353
ES.5632.3	chr11	-	1163	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	525.5	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTGTTGTGTGGA	NA	False	NA	-8	True	AATAAA	-22	NA	78441633	78432643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78433623_78434311_78434457_78441594
ES.5632.4	chr11	-	1993	2	NIC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	70	-1	intron_retention	FALSE	canonical	3	1037	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTGTTGTGTGGA	NA	False	NA	-8	True	AATAAA	-22	NA	78441533	78432643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78434457_78441353
ES.5632.6	chr11	-	3855	1	NIC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	39	-5067	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGATTTTGGGTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	78441564	78437709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78437700_78441600
ES.5633.1	chr11	+	174	1	Intergenic	novelGene_4435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGGGGGCAGTGGGA	NA	False	NA	NA	False	NA	NA	NA	78447680	78447854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78447700_78447900
ES.5634.1	chr11	+	253	1	Intergenic	novelGene_4436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGAGCTGGGCCTGGC	NA	False	NA	NA	False	AATAAA	-11	NA	78456933	78457186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78456900_78457200
ES.5635.1	chr11	+	183	1	Intergenic	novelGene_4438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	78464312	78464495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78464300_78464500
ES.5635.2	chr11	+	257	2	Antisense	novelGene_ENSMUSG00000017376.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATTTATTTAATAAA	NA	False	NA	NA	False	NA	NA	NA	78464313	78465342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_78464385_78465156
ES.5635.3	chr11	+	262	1	Intergenic	novelGene_4439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTATTTAATAAACAT	NA	False	NA	NA	False	NA	NA	NA	78465083	78465345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78465100_78465300
ES.5636.1	chr11	+	210	1	Intergenic	novelGene_4442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACTCAAGTGTACAAT	6019	False	NA	NA	False	NA	NA	NA	78556959	78557169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78557000_78557200
ES.5637.1	chr11	+	4025	2	Antisense	novelGene_ENSMUSG00000017376.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAAGGGCCCCTTCCCC	NA	False	NA	NA	False	NA	NA	NA	78565388	78587348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_78568703_78586637
ES.5638.1	chr11	-	4555	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-109	-2	-109	2	multi-exon	TRUE	canonical	3	79	junction_6	8.57962703152066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGCTGTCTTATTTCCAC	NA	False	NA	1	True	ATTAAA	-21	NA	78588308	78457991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.10	chr11	-	4310	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-108	242	-108	4	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTCGTTGTTGTT	NA	False	NA	-13	True	ACTAAA	-17	NA	78588307	78458235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.11	chr11	-	3112	10	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	75	-2	intron_retention	FALSE	canonical	0	0	junction_9	30.092450142113	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATATCTTTGTTGTCGTT	NA	False	NA	-19	True	ACTAAA	-11	NA	78587245	78458241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78586634
ES.5638.12	chr11	-	4039	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-96	501	-96	-255	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTTCACCTGTACG	NA	False	NA	NA	False	AATAAA	-18	NA	78588295	78458494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.13	chr11	-	3720	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-103	827	-103	-581	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGCCACAAAGGCACAT	NA	False	NA	NA	False	NA	NA	NA	78588302	78458820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.14	chr11	-	3536	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-96	1004	-96	-758	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCATCTTTCATGTATG	NA	False	NA	NA	False	CATAAA	-18	NA	78588295	78458997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.15	chr11	-	3080	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-96	1460	-96	-1214	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCATTTGGGGTTTAT	NA	False	NA	NA	False	AATGAA	-13	NA	78588295	78459453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.16	chr11	-	2868	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	-55	1631	-55	-1385	multi-exon	FALSE	canonical	3	79	junction_6	8.57962703152066	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACTTGTATGATATGA	NA	False	NA	-6	True	AATGAA	-16	NA	78588254	78459624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.17	chr11	-	176	1	Intergenic	novelGene_4437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	78461940	78461764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78461800_78461900
ES.5638.18	chr11	-	2494	4	ISM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	106461	14089	-18513	-13843	internal_fragment	FALSE	canonical	3	79	junction_2	6.97614984548545	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	78481738	78472082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78474251_78477694_78477905_78480130_78480217_78481708
ES.5638.19	chr11	-	3480	4	NNC	ENSMUSG00000017376.16	novel	1875	3	NA	NA	-97	23778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6976087896015	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAAGATGGATTAATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	78588296	78484319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78485952_78509100_78509157_78517402_78517533_78586634
ES.5638.2	chr11	-	4307	9	NNC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-109	-2	intron_retention	FALSE	canonical	0	0	junction_8	31.7991745175877	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTCGCTGTCTTATTT	NA	False	NA	-3	True	ATTAAA	-17	NA	78588308	78457995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481758_78586634
ES.5638.20	chr11	-	5117	1	Intergenic	novelGene_4440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTTGGATTTTGTTTGT	8116	False	NA	NA	False	AATAAA	-12	NA	78504010	78498893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78498900_78504000
ES.5638.21	chr11	-	1841	3	FSM	ENSMUSG00000017376.16	ENSMUST00000165271.2	1875	3	-932	966	-53	-966	multi-exon	FALSE	canonical	3	97	junction_2	2	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTGTTGTTTAGCC	NA	False	NA	NA	False	AAGAAA	-39	NA	78588252	78509063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78509157_78517402_78517533_78586634
ES.5638.22	chr11	-	2255	1	Intergenic	novelGene_4441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTAATTCTCTGCATTTA	8115	False	NA	NA	False	NA	NA	NA	78533357	78531102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78531100_78533400
ES.5638.23	chr11	-	2487	2	NNC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-55	-59733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCTTTTGGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	78588254	78567830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78568698_78586634
ES.5638.24	chr11	-	5067	1	Intergenic	novelGene_4443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGTTGTGGTTATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	78576250	78571183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78571200_78576200
ES.5638.4	chr11	-	3535	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-244	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	27.2178235234813	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATACGTCGCTGTCTTATT	NA	False	NA	-4	True	ATTAAA	-16	NA	78588443	78457996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5638.5	chr11	-	4491	4	ISM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	120136	7	-4838	-7	3prime_fragment	FALSE	canonical	3	86	junction_2	9.20144916122817	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACGTCGCTGTCT	NA	False	NA	-8	True	ATTAAA	-12	NA	78468063	78458000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666
ES.5638.6	chr11	-	4532	12	NNC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-55	-7	intron_retention	FALSE	canonical	0	0	junction_10	36.7299728980421	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACGTCGCTGTCT	NA	False	NA	-8	True	ATTAAA	-12	NA	78588254	78458000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78535760_78535801_78586634
ES.5638.7	chr11	-	3902	8	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	242	-7	intron_retention	FALSE	canonical	0	0	junction_7	33.9284962405182	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACGTCGCTGTCT	NA	False	NA	-8	True	ATTAAA	-12	NA	78587957	78458000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78586634
ES.5638.8	chr11	-	3518	12	NNC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.7299728980421	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAATACGTCGCTGTC	NA	False	NA	-9	True	ATTAAA	-11	NA	78588233	78458001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78458768_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517528_78586630
ES.5638.9	chr11	-	3150	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-96	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	27.2178235234813	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTCGTTGTTGTTGT	NA	False	NA	-11	True	ACTAAA	-19	NA	78588295	78458233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ES.5639.1	chr11	-	179	1	Intergenic	novelGene_4444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAACACACAAAG	NA	False	NA	NA	False	NA	NA	NA	78596437	78596258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78596300_78596400
ES.564.1	chr1	+	2024	17	NNC	ENSMUSG00000026020.10	novel	714	7	NA	NA	-14130	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	779.268477082834	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	979	False	NA	NA	False	AATAAA	-19	NA	59709999	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59710047_59710292_59710400_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.10	chr1	+	1605	12	NNC	ENSMUSG00000026020.10	novel	1713	13	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	557.266557877759	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724114	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745940_59750507
ES.564.11	chr1	+	2197	16	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	640.79986128449	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724114	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735080_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.12	chr1	+	1966	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	525.219915067654	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724123	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749700_59749812_59750429
ES.564.13	chr1	+	3374	12	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-6	18	intron_retention	FALSE	canonical	3	1434	junction_2	176.60606580562	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAAGATTAAAATTAAAGG	NA	False	NA	NA	False	GATAAA	-34	NA	59724123	59748276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161
ES.564.14	chr1	+	2697	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-42	6852	-4	682	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCTTAGCTACTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	59724125	59751351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.15	chr1	+	1751	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-2	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	540.224662886222	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724125	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59744886_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.16	chr1	+	3467	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	306	junction_3	461.872020492267	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724125	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.17	chr1	+	1905	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	canonical	1	54	junction_13	512.353772070727	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724125	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748235_59749700_59749812_59750429
ES.564.18	chr1	+	3128	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	1434	junction_3	218.380347859786	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724125	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.19	chr1	+	1933	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	531.084165205991	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724127	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.2	chr1	+	4998	1	FSM	ENSMUSG00000101400.2	ENSMUST00000185710.2	385	1	-2390	-2223	-2390	2223	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTATTACTTTCGGGC	989	False	NA	NA	False	AAAACA	-3	NA	59710009	59715007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59710000_59715000
ES.564.20	chr1	+	4119	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	306	junction_2	462.602146084657	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724132	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.21	chr1	+	2185	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	614.893580675189	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTTGTGATCTCTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	59724133	59750670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.22	chr1	+	3236	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	171	junction_3	608.300614626602	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724134	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.23	chr1	+	2997	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	171	junction_3	604.462389741698	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724134	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.24	chr1	+	2805	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	682	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCTTAGCTACTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	59724134	59751351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.25	chr1	+	3895	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	171	junction_2	609.477142930809	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724134	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.26	chr1	+	2087	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	664.760187335754	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724140	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59742294_59742384_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.27	chr1	+	4329	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-7	intron_retention	FALSE	canonical	0	0	junction_9	746.637455393123	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGGCAGTTTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	59724140	59750662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743906_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.28	chr1	+	3750	12	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-2	-627	intron_retention	FALSE	canonical	3	1434	junction_3	181.809317965757	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGATTTTGGTGTTGT	NA	False	NA	17	True	NA	NA	NA	59724141	59749811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59745927_59746161_59746224_59748161_59748296_59749653
ES.564.29	chr1	+	2336	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	306	junction_3	446.071199816938	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	59724142	59750668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.3	chr1	+	2186	16	NNC	ENSMUSG00000026020.10	novel	714	7	NA	NA	-14098	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	654.911278130269	932	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTTTTGTGATCTCTT	1011	False	NA	NA	False	AATAAA	-20	NA	59710031	59750668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59710400_59723666_59723731_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.31	chr1	+	1986	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	526.71122475766	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724146	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735250_59737478_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.32	chr1	+	2118	16	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	620.433124697757	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGGCAGTTTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	59724147	59750662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731755_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.33	chr1	+	2243	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	620.253697198887	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724147	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731635_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.35	chr1	+	2131	16	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	721.350665226159	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724147	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724274_59729644_59729722_59731495_59731549_59731635_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.36	chr1	+	1753	14	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-20	8392	4	-627	5prime_fragment	FALSE	canonical	3	1434	junction_3	175.9835589416	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGATTTTGGTGTTGT	NA	False	NA	17	True	NA	NA	NA	59724147	59749811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653
ES.564.37	chr1	+	1981	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	1	15	junction_9	743.499900498188	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724147	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.38	chr1	+	3348	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	4	-3	intron_retention	FALSE	canonical	3	1434	junction_3	204.351333383517	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724147	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59749812_59750429
ES.564.39	chr1	+	1973	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	526.483409626785	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724155	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743360_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.4	chr1	+	2894	3	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTTTCTTCTTTACA	3964	False	NA	NA	False	NA	NA	NA	59714497	59723928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59715018_59715216_59715541_59721878
ES.564.41	chr1	+	868	7	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_1	750.342236730828	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGGCAGTTTTGTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	59724157	59750663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724274_59744886_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.42	chr1	+	1954	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	525.39396297115	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724157	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745902_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.43	chr1	+	2590	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-4	intron_retention	FALSE	non_canonical	0	0	junction_14	736.320000310424	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724158	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742384_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749808_59750429
ES.564.44	chr1	+	1997	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	526.448095199114	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724158	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740026_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.45	chr1	+	2820	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	1434	junction_3	216.001123161665	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724158	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.46	chr1	+	2732	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	306	junction_3	462.890775261816	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724158	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.47	chr1	+	3512	13	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1434	junction_3	226.486509286732	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724158	59750669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.48	chr1	+	1963	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	526.72718803214	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59724158	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743895_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.49	chr1	+	4735	12	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_10	585.941327838736	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724158	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59749653_59749812_59750429
ES.564.5	chr1	+	2062	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-86	7531	-48	3	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGATCTCTTTATA	NA	False	NA	NA	False	AATAAA	-24	NA	59724081	59750672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.50	chr1	+	1936	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	689.009196941077	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724158	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740113_59741980_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749691_59749812_59750429
ES.564.52	chr1	+	3014	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	915	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGTCTTTGTGATTAA	NA	False	NA	NA	False	ACTAAA	-13	NA	59724158	59751584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.53	chr1	+	5809	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	3710	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTAAGATTGTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	59724158	59754379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.54	chr1	+	2852	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	1434	junction_3	214.821984924962	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724162	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.55	chr1	+	7337	13	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	1	-3	intron_retention	FALSE	canonical	3	1601	junction_11	185.466734813072	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724162	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.56	chr1	+	3908	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	-3	intron_retention	FALSE	canonical	3	1434	junction_3	217.14317802619	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724167	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59748296_59749653_59749812_59750429
ES.564.57	chr1	+	1981	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	513.334641419837	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724168	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729633_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.58	chr1	+	2829	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	3	682	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	614.893580675189	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTCTTAGCTACTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	59724170	59751351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.59	chr1	+	2284	15	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	3	-2	intron_retention	FALSE	canonical	1	35	junction_8	634.695765139263	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724170	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743805_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.6	chr1	+	1615	13	ISM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-76	9944	-38	1	5prime_fragment	FALSE	canonical	3	1434	junction_3	169.099986858532	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAGCAAAAAAAGCC	NA	False	NA	NA	False	GATAAA	-17	NA	59724091	59748259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161
ES.564.60	chr1	+	1832	13	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	547.020179142314	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724176	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.61	chr1	+	1011	8	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	898.226938280667	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724177	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724287_59743221_59743368_59744886_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.62	chr1	+	2188	17	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	790.748577298752	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724177	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59727728_59727779_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.63	chr1	+	3950	13	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1434	junction_3	223.30564193997	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724178	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.64	chr1	+	1526	12	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	359	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	571.231972969081	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59729696	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59729722_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.65	chr1	+	176	1	ISM	ENSMUSG00000026020.10	ENSMUST00000186044.2	725	2	5568	240	395	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	793	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAATGTAAGTAA	NA	False	NA	NA	False	NA	NA	NA	59729732	59729908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59729700_59729900
ES.564.66	chr1	+	2246	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-500	-2	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	641.841802478059	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59731102	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.67	chr1	+	174	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	786	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	59733657	59733831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59733700_59733800
ES.564.68	chr1	+	1597	12	NNC	ENSMUSG00000026020.10	novel	714	7	NA	NA	-437	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	571.231972969081	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGCAGTTTTGTGATCT	NA	False	NA	NA	False	AATAAA	-17	NA	59737137	59750665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59737236_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.69	chr1	+	1639	12	NNC	ENSMUSG00000026020.10	novel	714	7	NA	NA	-348	-2	at_least_one_novel_splicesite	FALSE	canonical	2	107	junction_1	541.955778745556	890	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59737226	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59737365_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.7	chr1	+	2154	16	NNC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	707.219406470785	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59724111	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59724386_59729633_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.70	chr1	+	3796	10	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	37	-2	intron_retention	FALSE	canonical	3	1601	junction_8	186.195238034346	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59737611	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.71	chr1	+	174	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	807	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGCAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	59738910	59739084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59738900_59739100
ES.564.72	chr1	+	2665	7	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-756	-3	intron_retention	FALSE	canonical	3	1601	junction_5	218.123563350888	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCAGTTTTGTGATCTC	NA	False	NA	NA	False	AATAAA	-18	NA	59742561	59750666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59743368_59743782_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.73	chr1	+	86	1	FSM	ENSMUSG00000089093.5	ENSMUST00000158468.5	84	1	3	-5	3	5	mono-exon	FALSE	NA	NA	NA	NA	NA	846	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTGGTCAAAAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	59743951	59744037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59744000_59744000
ES.564.74	chr1	+	4312	4	ISM	ENSMUSG00000026020.10	ENSMUST00000187837.7	638	7	2804	-3948	2293	3717	3prime_fragment	FALSE	canonical	3	1601	junction_2	293.541971256052	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTTTTCCATTTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	59746160	59754386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.75	chr1	+	6202	1	Genic_Genomic	ENSMUSG00000026020.10	novel	NA	NA	NA	NA	8141	7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGGTGCTGCTGATTATG	NA	False	NA	9	True	AATAAA	-24	NA	59752008	59758210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_59752000_59758200
ES.564.8	chr1	+	2142	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724113	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ES.564.9	chr1	+	1904	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	-15	-2	combination_of_known_junctions	TRUE	canonical	2	116	junction_13	497.65060278169	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCAGTTTTGTGATCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	59724114	59750667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748235_59749712_59749812_59750429
ES.5640.1	chr11	-	172	1	Intergenic	novelGene_4445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATTAAAAAAAATA	2737	False	NA	NA	False	NA	NA	NA	78605434	78605262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78605300_78605400
ES.5641.1	chr11	-	177	1	Intergenic	novelGene_4446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	78635847	78635670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78635700_78635800
ES.5642.1	chr11	-	1239	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	-15	0	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	6580	False	NA	-2	True	AATAAA	-37	NA	78642570	78641331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78641300_78642600
ES.5643.1	chr11	-	178	1	Intergenic	novelGene_4447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGACATGGGCC	NA	False	NA	NA	False	NA	NA	NA	78672607	78672429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78672400_78672600
ES.5644.1	chr11	-	176	1	Intergenic	novelGene_4448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	78679622	78679446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78679400_78679600
ES.5645.1	chr11	+	588	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	-34	7481	-34	114	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTCATTTTTGC	NA	False	NA	36	True	NA	NA	NA	78717375	78730215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.10	chr11	+	150	1	Intergenic	novelGene_4452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTAAACA	NA	False	NA	NA	False	NA	NA	NA	78798350	78798500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78798400_78798500
ES.5645.2	chr11	+	4686	32	Fusion	ENSMUSG00000072640.12_ENSMUSG00000020826.10	novel	8035	4	NA	NA	-10	-27	multi-exon	TRUE	canonical	0	0	junction_4	66.834459324317	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGTTTGGTCAAGTT	NA	False	NA	NA	False	TATAAA	-21	NA	78717399	78851053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948_78730106_78751799_78751948_78811235_78811364_78813047_78813204_78819399_78819470_78820576_78820697_78822405_78822555_78826177_78826341_78827228_78827321_78828386_78828529_78828625_78828766_78830804_78830980_78831073_78831176_78835485_78835681_78836057_78836141_78836464_78836610_78836694_78836800_78838672_78838723_78839038_78839214_78839908_78840042_78840439_78840519_78840781_78840964_78841920_78842085_78843628_78843837_78845720_78845809_78846165_78846288_78847321_78847471_78848235_78848431_78850479
ES.5645.3	chr11	+	5062	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	-1	2974	-1	-2974	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGCCTTGGGTAATGAA	NA	False	NA	NA	False	AATAAA	-19	NA	78717408	78734722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.4	chr11	+	427	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	12	7596	-8	-1	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTGAGGTGGTTCTCG	NA	False	NA	19	True	AAGAAA	-12	NA	78717421	78730100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.5	chr11	+	1651	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	12	6372	-8	1223	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTACCACGTGTG	NA	False	NA	NA	False	AAAAAG	-15	NA	78717421	78731324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.6	chr11	+	4576	4	NIC	ENSMUSG00000072640.12	novel	8035	4	NA	NA	-8	-3558	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	93.9834500797289	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGTGGAGGTAGCCCT	NA	False	NA	NA	False	NA	NA	NA	78717421	78734138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_78717463_78726843_78726985_78728915_78729120_78729948
ES.5645.7	chr11	+	2579	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	21	5435	1	2160	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAGAAAAAGGAAAAC	NA	False	NA	NA	False	NA	NA	NA	78717430	78732261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.8	chr11	+	4449	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	29	3557	9	-3557	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTGGAGGTAGCCCTA	NA	False	NA	NA	False	NA	NA	NA	78717438	78734139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ES.5645.9	chr11	+	127	1	Intergenic	novelGene_4450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	78727766	78727893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78727800_78727900
ES.5646.1	chr11	-	171	1	Intergenic	novelGene_4449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACTGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	78719225	78719054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78719100_78719200
ES.5647.1	chr11	-	168	1	Intergenic	novelGene_4451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	78797626	78797458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78797500_78797600
ES.5648.1	chr11	-	176	1	Intergenic	novelGene_4453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	78799385	78799209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78799200_78799400
ES.5649.1	chr11	-	176	1	Intergenic	novelGene_4454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	78804496	78804320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78804300_78804500
ES.565.1	chr1	+	178	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	59776518	59776696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59776500_59776700
ES.5650.1	chr11	-	1531	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	-18	7	-18	-2	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACATGTGAGATGGCTG	NA	False	NA	-4	True	AATAAA	-22	NA	78875790	78853806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ES.5650.2	chr11	-	1550	11	FSM	ENSMUSG00000001123.16	ENSMUST00000108269.10	1586	11	34	2	34	-2	multi-exon	FALSE	canonical	2	4	junction_6	7.48398289682706	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACATGTGAGATGGCTG	NA	False	NA	-4	True	AATAAA	-22	NA	78875716	78853806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78860539_78860633_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ES.5650.3	chr11	-	1416	10	NNC	ENSMUSG00000001123.16	novel	1520	10	NA	NA	7089	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	7.18709405724277	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACATGTGAGATGGC	NA	False	NA	-6	True	AATAAA	-20	NA	78868568	78853808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78868494
ES.5650.4	chr11	-	203	1	Intergenic	novelGene_4455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATACTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	78872526	78872323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78872300_78872500
ES.5651.1	chr11	+	347	1	Intergenic	novelGene_4456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCCGG	5405	False	NA	NA	False	NA	NA	NA	78890830	78891177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_78890800_78891200
ES.5652.1	chr11	-	175	1	Intergenic	novelGene_4457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	78891660	78891485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78891500_78891700
ES.5653.1	chr11	-	158	1	Intergenic	novelGene_4458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	78892457	78892299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78892300_78892500
ES.5654.1	chr11	-	184	1	Intergenic	novelGene_4459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTTAAAAAAAGAATAGA	NA	False	NA	NA	False	NA	NA	NA	78895607	78895423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78895400_78895600
ES.5655.1	chr11	-	5612	18	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-112	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	9.7916001003897	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCCTGTTTGTTTTGAG	NA	False	NA	0	True	AATAAA	-19	NA	79037345	78904260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.10	chr11	-	6517	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-64	-156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.296372191609	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATTTGTCTTCCAGAAA	NA	False	NA	NA	False	AGTAAA	-22	NA	79037297	78904422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.11	chr11	-	5461	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-83	-158	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.422443793787	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATTTGTCTTCCAGA	NA	False	NA	NA	False	AGTAAA	-20	NA	79037316	78904424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.12	chr11	-	3484	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-66	1477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.422443793787	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCAGCGGCTTCTAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	79037299	78906384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.13	chr11	-	3442	18	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-66	1477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	9.7916001003897	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTCAGCGGCTTCTAGA	NA	False	NA	NA	False	AAAAAG	-9	NA	79037299	78906384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.14	chr11	-	4584	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-114	1456	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.296372191609	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTACAGAC	NA	False	NA	NA	False	NA	NA	NA	79037347	78906405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.16	chr11	-	2865	18	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-40	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	11.4662133436853	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCTCTTGCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	79037273	78907855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78935942_78938122_78938271_78965171_78965313_79036880
ES.5655.17	chr11	-	3166	18	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-188	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	9.61328377369018	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCTCTTGCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	79037421	78907855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.18	chr11	-	3020	19	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-105	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.4012173696669	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCTCTTGCTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	79037338	78907855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918628_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936089_78938122_78938170_78965171_78965313_79036880
ES.5655.2	chr11	-	6679	18	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-111	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	9.61328377369018	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	79037344	78904265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.20	chr11	-	2863	18	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.9063703055378	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGGCTCTTGCTTGTG	NA	False	NA	NA	False	NA	NA	NA	79037219	78907857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_79036880
ES.5655.21	chr11	-	3038	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGAGTGGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	79037262	78907861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.22	chr11	-	2662	19	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	189	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	12.5368592361154	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCCAAGAGTGGCTCTT	NA	False	NA	NA	False	NA	NA	NA	79037044	78907864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918467_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935666_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.23	chr11	-	2909	18	NNC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-64	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	9.61328377369018	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGGCCTGTGGGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	79037297	78907987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935666_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.24	chr11	-	173	1	Intergenic	novelGene_4460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGTGCAAAGACTAGG	7303	False	NA	NA	False	NA	NA	NA	78952607	78952434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78952400_78952600
ES.5655.25	chr11	-	175	1	Intergenic	novelGene_4461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAGATAGAGGG	9657	False	NA	NA	False	NA	NA	NA	78959738	78959563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_78959600_78959700
ES.5655.3	chr11	-	6392	2	NIC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-80	0	intron_retention	FALSE	canonical	3	31	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	78911316	78904265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_78910522_78911180
ES.5655.4	chr11	-	5545	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	12.7085078919402	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACTCCTGTTTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	79037223	78904265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_78985995_78986056_79036880
ES.5655.5	chr11	-	5650	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	11.422443793787	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGACTCCTGTTTGT	NA	False	NA	-6	True	AATAAA	-13	NA	79037347	78904266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.7	chr11	-	5446	19	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-64	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	12.6599641136152	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGAGACTCCTGTTTG	NA	False	NA	-7	True	AATAAA	-12	NA	79037297	78904267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78935942_78938122_78938271_78965171_78965313_79036880
ES.5655.8	chr11	-	6532	18	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-69	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	9.61328377369018	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTTACGTTGGGGT	NA	False	NA	-109	True	ATTAAA	-15	NA	79037302	78904369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935666_78936095_78938122_78938271_78965171_78965313_79036880
ES.5655.9	chr11	-	5452	18	NNC	ENSMUSG00000018334.19	novel	5495	19	NA	NA	-64	-106	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	9.7916001003897	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAATGTGTTACGTTGG	NA	False	NA	-112	True	ATTAAA	-12	NA	79037297	78904372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_78907090_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935665_78936095_78938122_78938271_78965171_78965313_79036880
ES.5656.1	chr11	+	142	1	Intergenic	novelGene_4462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGGAGAGAGAGA	9432	False	NA	NA	False	NA	NA	NA	79096549	79096691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79096500_79096700
ES.5657.1	chr11	-	3924	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	190	junction_4	93.9730679503442	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCTTTCATGGGTTGC	943	False	NA	-11	True	ATTAAA	-25	NA	79145529	79130200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.10	chr11	-	2631	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	142.650916403006	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	975	False	NA	-29	True	ATTAAA	-7	NA	79145497	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.11	chr11	-	3863	9	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	0	0	junction_6	162.608761679683	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	976	False	NA	-29	True	ATTAAA	-7	NA	79145496	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139226_79139486_79141806_79141976_79145178
ES.5657.12	chr11	-	3532	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	151.935983920454	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	975	False	NA	-29	True	ATTAAA	-7	NA	79145497	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79133324_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.13	chr11	-	2713	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	179.338152213928	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	976	False	NA	-29	True	ATTAAA	-7	NA	79145496	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134237_79134402_79135288_79135485_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.14	chr11	-	3517	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	45	junction_4	137.004504944181	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	976	False	NA	-29	True	ATTAAA	-7	NA	79145496	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.15	chr11	-	4422	9	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	2	8	junction_4	148.468851952186	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTACTACATTGCCGAT	972	False	NA	-29	True	ATTAAA	-7	NA	79145500	79130218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79133324_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.2	chr11	-	2468	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	-4	12	-4	4	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCGATATTTCTTTC	971	False	NA	-20	True	ATTAAA	-16	NA	79145501	79130209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.3	chr11	-	3977	9	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	4	intron_retention	FALSE	canonical	1	2	junction_5	160.024216917315	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCGATATTTCTTTC	976	False	NA	-20	True	ATTAAA	-16	NA	79145496	79130209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135485_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.5	chr11	-	4773	8	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-4	3	intron_retention	FALSE	canonical	3	351	junction_6	53.3008404421238	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCCGATATTTCTTT	971	False	NA	-21	True	ATTAAA	-15	NA	79145501	79130210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.6	chr11	-	4655	7	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	4	3	intron_retention	FALSE	canonical	0	0	junction_1	160.573365025323	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCCGATATTTCTTT	981	False	NA	-21	True	ATTAAA	-15	NA	79145491	79130210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79132420_79132535_79132809_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.7	chr11	-	5038	7	NIC	ENSMUSG00000017677.12	novel	1260	8	NA	NA	720	2	intron_retention	FALSE	canonical	3	190	junction_4	105.38408587427	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTGCCGATATTTCTT	5342	False	NA	-22	True	ATTAAA	-14	NA	79141130	79130211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79134402_79135288_79135390_79136995_79137128_79139216
ES.5657.8	chr11	-	2626	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	144.381524757699	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACATTGCCGATATTTCT	974	False	NA	-23	True	ATTAAA	-13	NA	79145498	79130212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134237_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ES.5657.9	chr11	-	6876	7	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	-21	0	intron_retention	FALSE	canonical	3	351	junction_5	55.6020083570129	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	954	False	NA	-24	True	ATTAAA	-12	NA	79145518	79130213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79135390_79136995_79139486_79141806_79141976_79145178
ES.5658.1	chr11	+	156	1	Intergenic	novelGene_4463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	79162579	79162735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79162600_79162700
ES.5659.1	chr11	+	157	1	Intergenic	novelGene_4464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	79162954	79163111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79163000_79163100
ES.566.1	chr1	+	195	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59794999	59795194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59795000_59795200
ES.5660.1	chr11	+	197	1	Intergenic	novelGene_4465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTTTTTCTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	79184140	79184337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79184100_79184300
ES.5661.1	chr11	-	176	1	Intergenic	novelGene_4466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAATCCCAGC	NA	False	NA	NA	False	NA	NA	NA	79189097	79188921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79188900_79189100
ES.5662.1	chr11	-	178	1	Intergenic	novelGene_4467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGAGAGAACATG	NA	False	NA	NA	False	NA	NA	NA	79204153	79203975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79204000_79204200
ES.5663.1	chr11	-	206	1	Intergenic	novelGene_4468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTTATGGGATGGG	NA	False	NA	NA	False	NA	NA	NA	79216223	79216017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79216000_79216200
ES.5664.1	chr11	+	169	1	Intergenic	novelGene_4469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	79217167	79217336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79217200_79217300
ES.5665.1	chr11	-	988	1	Intergenic	novelGene_4470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	79226884	79225896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79225900_79226900
ES.5666.1	chr11	+	4147	14	FSM	ENSMUSG00000020716.17	ENSMUST00000131800.2	3851	14	-285	-11	-91	11	multi-exon	FALSE	canonical	2	3	junction_2	2.72181630968525	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTGTGTTAGTGGT	NA	False	NA	NA	False	AATAAA	-42	NA	79230427	79321625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403
ES.5666.10	chr11	+	5229	1	Intergenic	novelGene_4471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTACTGTCCACTGTA	NA	False	NA	NA	False	NA	NA	NA	79244444	79249673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79244400_79249700
ES.5666.11	chr11	+	173	1	Intergenic	novelGene_4475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGGATCAACTGA	3809	False	NA	NA	False	NA	NA	NA	79280590	79280763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79280600_79280800
ES.5666.12	chr11	+	2516	3	ISM	ENSMUSG00000020716.17	ENSMUST00000131800.2	3851	14	78638	-11	-29628	11	3prime_fragment	FALSE	canonical	3	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTGTGTTAGTGGT	2684	False	NA	NA	False	AATAAA	-42	NA	79309350	79321625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79309510_79316338_79316474_79319403
ES.5666.13	chr11	+	6939	44	NIC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-22560	-1072	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	4.9722866366463	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCAGCTATACAGCTTAA	9752	False	NA	NA	False	ATTAAA	-17	NA	79316418	79459869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79358939_79358981_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456246_79456378_79456745_79456847_79459475
ES.5666.15	chr11	+	8303	43	NIC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-11364	-58	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	4.82176659602847	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAATTTAATTTTTTTAA	NA	False	NA	NA	False	AATAAA	-22	NA	79327614	79470816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.16	chr11	+	1705	11	NNC	ENSMUSG00000020716.17	novel	4354	31	NA	NA	-7136	-9768	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4.92442890089805	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACTATTTGTCCGTCT	2252	False	NA	NA	False	GATAAA	-14	NA	79331842	79339964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79339797
ES.5666.18	chr11	+	6111	1	Antisense	novelGene_ENSMUSG00000070354.14_AS_novelGene_ENSMUSG00000093938.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79410566	79416677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_79410600_79416700
ES.5666.19	chr11	+	171	1	Intergenic	novelGene_4476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACGGGGGAAAAAGGTAA	3124	False	NA	NA	False	NA	NA	NA	79415803	79415974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79415800_79416000
ES.5666.2	chr11	+	7856	45	NNC	ENSMUSG00000020716.17	novel	9217	57	NA	NA	-90	-614	intron_retention	TRUE	non_canonical	0	0	junction_16	4.54880558294207	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACATCTGACTATCAGAT	NA	False	NA	NA	False	AATACA	-16	NA	79230428	79460327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329510_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79364148_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475
ES.5666.20	chr11	+	3144	20	NNC	ENSMUSG00000020716.17	novel	4053	18	NA	NA	-366	-821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.10173508044321	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTTTTCCAAAGAGG	NA	False	NA	NA	False	AATAAA	-12	NA	79427367	79460120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79427493_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949
ES.5666.21	chr11	+	5411	18	FSM	ENSMUSG00000020716.17	ENSMUST00000137997.2	4133	18	-39	-1239	-39	-325	multi-exon	FALSE	canonical	2	4	junction_12	4.56934270257375	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTCGTATTGTTAAC	NA	False	NA	NA	False	NA	NA	NA	79437094	79472113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.22	chr11	+	5309	16	ISM	ENSMUSG00000020716.17	ENSMUST00000137997.2	4133	18	1359	-1560	1359	-4	3prime_fragment	FALSE	canonical	2	4	junction_10	4.67332857821917	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTGAGGAGTTATTT	NA	False	NA	NA	False	AGTAAA	-20	NA	79438492	79472434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.23	chr11	+	2403	11	NIC	ENSMUSG00000020716.17	novel	4133	18	NA	NA	4741	527	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	6.55438784326958	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAACATTTGGATTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	79441874	79470295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79469079
ES.5666.24	chr11	+	1787	1	Intergenic	novelGene_4478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAAAAGTTTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	79448284	79450071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79448300_79450100
ES.5666.25	chr11	+	2377	6	ISM	ENSMUSG00000020716.17	ENSMUST00000137997.2	4133	18	19109	61	19109	-61	3prime_fragment	FALSE	canonical	3	10	junction_5	2.63818119165458	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACAATTTAATTTTTT	5308	False	NA	NA	False	AATAAA	-19	NA	79456242	79470813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.3	chr11	+	9993	58	FSM	ENSMUSG00000020716.17	ENSMUST00000071325.9	11917	58	-216	2140	-84	530	multi-exon	TRUE	canonical	0	0	junction_52	4.46062766190997	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTTGGATTCTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	79230434	79470298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456246_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.4	chr11	+	4913	32	NNC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-41	5412	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	3.94762801052345	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTGTCTGGTTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	79230477	79355144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79354758
ES.5666.5	chr11	+	3544	1	Genic_Genomic	ENSMUSG00000020716.17	novel	NA	NA	NA	NA	-38	-1988	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGTAGTAAGAAGCAGC	NA	False	NA	NA	False	AAAAAG	-18	NA	79230480	79234024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_79230500_79234000
ES.5666.6	chr11	+	12098	58	NIC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-25	21	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	4.34117480727217	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGCCAACTGTTTGTTT	NA	False	NA	NA	False	AGTAAA	-45	NA	79230493	79472459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5666.7	chr11	+	4556	12	ISM	ENSMUSG00000020716.17	ENSMUST00000131800.2	3851	14	-213	9267	-19	-9267	5prime_fragment	FALSE	canonical	2	3	junction_2	2.93736262207337	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGCCTCAGTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	79230499	79312347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377
ES.5666.8	chr11	+	8705	55	NIC	ENSMUSG00000020716.17	novel	11917	58	NA	NA	-19	-1066	combination_of_known_junctions	FALSE	canonical	1	2	junction_23	4.29310226099025	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATACAGCTTAATTTTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	79230499	79459875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456243_79456378_79456745_79456847_79459475
ES.5666.9	chr11	+	11837	57	FSM	ENSMUSG00000020716.17	ENSMUST00000108251.9	9217	57	46	-2666	13	-4	multi-exon	FALSE	canonical	0	0	junction_51	4.36577014736138	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTGAGGAGTTATTT	NA	False	NA	NA	False	AGTAAA	-20	NA	79230663	79472434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456246_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ES.5667.1	chr11	-	159	1	Intergenic	novelGene_4472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	79263365	79263206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79263200_79263400
ES.5668.1	chr11	-	220	1	Intergenic	novelGene_4473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	782	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTAAATTTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	79276661	79276441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79276400_79276700
ES.5668.2	chr11	-	177	2	Antisense	novelGene_ENSMUSG00000020716.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	783	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	79326363	79276482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79276641_79326344
ES.5668.3	chr11	-	175	2	Intergenic	novelGene_4474	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	783	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	79382378	79276482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79276610_79382330
ES.5669.1	chr11	-	3350	1	Intergenic	novelGene_4477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGAGAGACTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	79434803	79431453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79431500_79434800
ES.567.1	chr1	-	3635	3	ISM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	23587	3	23492	-3	3prime_fragment	FALSE	canonical	3	3231	junction_1	108	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGCTCCTTTTATT	NA	False	NA	-3	True	AATAAA	-18	NA	59686406	59678595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_59679428_59681576_59681649_59683675
ES.567.10	chr1	-	647	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	1661.2638825605	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	643	False	NA	-10	True	AATAAA	-11	NA	59709939	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59678924_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ES.567.11	chr1	-	1198	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-15	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1841.68277398688	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	669	False	NA	-10	True	AATAAA	-11	NA	59709913	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59706349_59706423_59709838
ES.567.12	chr1	-	1201	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-251	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1648.34832104747	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	338	False	NA	-10	True	AATAAA	-11	NA	59710244	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59710093
ES.567.15	chr1	-	1216	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	1652.21470759705	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	622	False	NA	-10	True	AATAAA	-11	NA	59709960	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59684285_59684330_59694616_59694692_59709838
ES.567.2	chr1	-	3326	4	NIC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	3447	junction_1	423.925569987102	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAAGCTCCTTTTATT	624	False	NA	-3	True	AATAAA	-18	NA	59709958	59678595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59681649_59683675_59683754_59694616_59694692_59709838
ES.567.22	chr1	-	1298	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	-191	108	-191	-108	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACTGCTTTTGATTCTG	398	False	NA	-9	True	AATAAA	-27	NA	59710184	59678700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ES.567.23	chr1	-	2437	1	NIC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	28754	-115	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAACAGACACTGCTTTT	3672	False	NA	-16	True	AATAAA	-20	NA	59681144	59678707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59678700_59681100
ES.567.24	chr1	-	175	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	59687456	59687281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59687300_59687500
ES.567.25	chr1	-	176	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTTATAGAGA	7735	False	NA	NA	False	NA	NA	NA	59690027	59689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59689900_59690000
ES.567.3	chr1	-	1212	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	-4	7	-4	-7	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTACTGAAGCTCCTTT	585	False	NA	-7	True	AATAAA	-14	NA	59709997	59678599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ES.567.5	chr1	-	1098	4	NIC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-10	-10	combination_of_known_splicesites	FALSE	canonical	3	875	junction_3	1164.88320826119	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	621	False	NA	-10	True	AATAAA	-11	NA	59709961	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_59679428_59681576_59681649_59683675_59683754_59709838
ES.567.7	chr1	-	1271	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	1439.42688595149	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	620	False	NA	-10	True	AATAAA	-11	NA	59709962	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59691930_59692028_59694616_59694692_59709838
ES.567.9	chr1	-	1142	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	9	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1678.18249901493	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	640	False	NA	-10	True	AATAAA	-11	NA	59709942	59678602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_59679428_59681576_59681645_59683675_59683746_59694616_59694692_59709838
ES.5670.1	chr11	+	7246	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	-90	0	-90	0	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79481947	79588849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.10	chr11	+	157	1	Intergenic	novelGene_4480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAAATTCTG	NA	False	NA	NA	False	NA	NA	NA	79497473	79497630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79497500_79497600
ES.5670.11	chr11	+	177	1	Intergenic	novelGene_4481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATAGTTCCAGG	1982	False	NA	NA	False	NA	NA	NA	79530191	79530368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79530200_79530400
ES.5670.12	chr11	+	6741	13	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-7376	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.6034344469638	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGACTTGTGTGAAC	3362	False	NA	2	True	AATAAA	-13	NA	79544011	79588840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79544075_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.13	chr11	+	3019	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-48	-4011	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	29.6014029322185	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCAGTTTGTTTTCTT	NA	False	NA	19	True	TATAAA	-19	NA	79551339	79584838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.14	chr11	+	7099	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551339	79588849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.15	chr11	+	6999	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	29.6014029322185	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551370	79588849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.16	chr11	+	3057	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-16	-4010	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGTTTGTTTTCTTG	NA	False	NA	20	True	TATAAA	-20	NA	79551371	79584839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.17	chr11	+	7051	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.024200970397	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGACTTGTGTGAAC	NA	False	NA	2	True	AATAAA	-13	NA	79551375	79588840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577523_79580447_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.18	chr11	+	6692	14	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-12	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	34.7482918570431	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTTGTGTGAACTT	NA	False	NA	4	True	AATAAA	-15	NA	79551375	79588842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548_79584235_79584598
ES.5670.2	chr11	+	3128	5	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-84	-47929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.3143694191639	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACATTTATATTTATTA	NA	False	NA	NA	False	TATAAA	-10	NA	79481953	79526395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79523114_79523273_79523909
ES.5670.20	chr11	+	6912	14	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.4161532381671	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGACTTGTGTGAACTTC	NA	False	NA	5	True	AATAAA	-16	NA	79551376	79588843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551432_79551506_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.21	chr11	+	8138	10	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-11	-9	intron_retention	FALSE	canonical	3	26	junction_2	32.2214559295855	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGACTTGTGTGAAC	NA	False	NA	2	True	AATAAA	-13	NA	79551376	79588840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574235_79575184_79575426_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581654_79582581_79582726_79583548
ES.5670.22	chr11	+	7153	14	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-10	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	41.1462969351956	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGACTTGTGTGAACTTC	NA	False	NA	5	True	AATAAA	-16	NA	79551377	79588843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79581720_79581819_79582581_79582726_79583548
ES.5670.23	chr11	+	7055	12	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	-4	-7	intron_retention	FALSE	canonical	3	26	junction_2	30.1612744979194	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTTGTGTGAACTT	NA	False	NA	4	True	AATAAA	-15	NA	79551383	79588842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581654_79582581_79582726_79583548
ES.5670.25	chr11	+	6198	9	ISM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	93386	7	24036	-7	3prime_fragment	FALSE	canonical	3	80	junction_1	16.8356021573331	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTTGTGTGAACTT	NA	False	NA	4	True	AATAAA	-15	NA	79575423	79588842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.28	chr11	+	5738	4	ISM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	99244	3	29894	-3	3prime_fragment	FALSE	canonical	3	108	junction_3	13.4742552876052	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGTGTGAACTTCTGT	2132	False	NA	8	True	AATAAA	-19	NA	79581281	79588846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.29	chr11	+	3295	1	Genic_Genomic	ENSMUSG00000017639.14	novel	NA	NA	NA	NA	35111	944	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCTTTTGCAAATGAAA	7349	False	NA	NA	False	NA	NA	NA	79586498	79589793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_79586500_79589800
ES.5670.3	chr11	+	3226	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	-80	4010	-80	-4010	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGTTTGTTTTCTTG	NA	False	NA	20	True	TATAAA	-20	NA	79481957	79584839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.4	chr11	+	2111	4	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-80	-56312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.03957069398096	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTTTAATAGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	79481957	79518012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79516381
ES.5670.5	chr11	+	7156	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-76	-7	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTTGTGTGAACTT	NA	False	NA	4	True	AATAAA	-15	NA	79481961	79588842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.6	chr11	+	3145	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-69	-4011	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCAGTTTGTTTTCTT	NA	False	NA	19	True	TATAAA	-19	NA	79481968	79584838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.7	chr11	+	2090	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-67	-5064	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTGCTGGTGTCCG	NA	False	NA	NA	False	NA	NA	NA	79481970	79583785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5670.8	chr11	+	631	2	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-57	-90723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCTACCCTTGTCCCT	NA	False	NA	NA	False	TATAAA	-15	NA	79481980	79483601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79483250
ES.5670.9	chr11	+	7386	14	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	84	-8	intron_retention	FALSE	canonical	2	11	junction_1	47.5982944351591	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGACTTGTGTGAACT	NA	False	NA	3	True	AATAAA	-14	NA	79482121	79588841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ES.5671.1	chr11	-	1245	5	Antisense	novelGene_ENSMUSG00000064486.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGGAATGTTTCATGA	7156	False	NA	NA	False	NA	NA	NA	79496927	79486092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79486414_79488203_79488453_79490026_79490162_79496307_79496442_79496521
ES.5671.2	chr11	-	179	1	Intergenic	novelGene_4479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	9989	False	NA	NA	False	NA	NA	NA	79494094	79493915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79493900_79494100
ES.5672.1	chr11	-	1204	3	NNC	ENSMUSG00000087434.2	novel	2187	3	NA	NA	38	-7065	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTCATCAAAGGTTTGT	9809	False	NA	NA	False	NA	NA	NA	79513951	79504969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79505886_79506660_79506723_79513725
ES.5672.2	chr11	-	7025	1	NIC	ENSMUSG00000087434.2	novel	2187	3	NA	NA	1825	-7235	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGACATTTCCCTGAG	7193	False	NA	NA	False	NA	NA	NA	79512164	79505139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79505100_79512200
ES.5673.1	chr11	-	1542	1	Intergenic	novelGene_4482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTACTTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	79595321	79593779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79593800_79595300
ES.5673.2	chr11	-	623	1	Intergenic	novelGene_4483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAAAAAGTCT	NA	False	NA	NA	False	TTTAAA	-6	NA	79595324	79594701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79594700_79595300
ES.5674.1	chr11	-	201	1	Intergenic	novelGene_4484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGCAAACTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	79606899	79606698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79606700_79606900
ES.5675.1	chr11	+	210	1	Intergenic	novelGene_4485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTCATATGGGTTCCG	NA	False	NA	NA	False	NA	NA	NA	79619077	79619287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79619100_79619300
ES.5676.1	chr11	-	1128	1	Intergenic	novelGene_4486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCTTTTTCTTATATT	NA	False	NA	NA	False	AATAAA	-16	NA	79648188	79647060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79647100_79648200
ES.5677.1	chr11	-	157	1	Intergenic	novelGene_4487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	7914	False	NA	NA	False	NA	NA	NA	79667213	79667056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79667100_79667200
ES.5678.1	chr11	+	177	1	Intergenic	novelGene_4488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATGGAAGG	NA	False	NA	NA	False	NA	NA	NA	79734635	79734812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79734600_79734800
ES.5679.1	chr11	+	176	1	Intergenic	novelGene_4489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79818664	79818840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79818700_79818800
ES.568.1	chr1	-	3830	1	Antisense	novelGene_ENSMUSG00000077345.3_AS_novelGene_ENSMUSG00000077358.3_AS_novelGene_ENSMUSG00000026020.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	59732519	59728689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_59728700_59732500
ES.5680.1	chr11	+	1172	3	Antisense	novelGene_ENSMUSG00000035575.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	79826306	79829236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_79826936_79828498_79828819_79829013
ES.5680.2	chr11	+	181	1	Intergenic	novelGene_4490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGATTTCCACCTTT	NA	False	NA	NA	False	NA	NA	NA	79827899	79828080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79827900_79828100
ES.5680.3	chr11	+	225	1	Intergenic	novelGene_4491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACAAGACGGGCTG	NA	False	NA	NA	False	NA	NA	NA	79828820	79829045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79828800_79829000
ES.5681.1	chr11	+	121	1	Intergenic	novelGene_4492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79851393	79851514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79851400_79851500
ES.5682.1	chr11	+	153	1	Intergenic	novelGene_4494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	79857855	79858008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79857900_79858000
ES.5683.1	chr11	+	564	1	Intergenic	novelGene_4495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCAGTTTTCCGACTCC	NA	False	NA	NA	False	NA	NA	NA	79859254	79859818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79859300_79859800
ES.5684.1	chr11	+	163	1	Intergenic	novelGene_4497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79860915	79861078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79860900_79861100
ES.5685.1	chr11	+	180	1	Intergenic	novelGene_4501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAGAAAACATT	NA	False	NA	NA	False	NA	NA	NA	79863140	79863320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79863100_79863300
ES.5686.1	chr11	+	1133	3	Intergenic	novelGene_4507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	35.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTCTTTGGTTGATCA	NA	False	NA	21	True	NA	NA	NA	79864023	79866011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79864090_79864479_79864672_79865136
ES.5686.2	chr11	+	638	2	Intergenic	novelGene_4508	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTACTGTTCACGGT	NA	False	NA	15	True	AATAAA	-25	NA	79864503	79865606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79864672_79865136
ES.5686.3	chr11	+	1121	2	Intergenic	novelGene_4509	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTCTTTGGTTGATCA	NA	False	NA	21	True	NA	NA	NA	79864504	79866011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79864708_79865093
ES.5686.4	chr11	+	990	2	Intergenic	novelGene_4510	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTCTTTGGTTGATCA	NA	False	NA	21	True	NA	NA	NA	79864592	79866011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79864708_79865136
ES.5686.5	chr11	+	1123	1	Intergenic	novelGene_4512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTCTTTGGTTGATCA	NA	False	NA	21	True	NA	NA	NA	79864888	79866011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79864900_79866000
ES.5687.1	chr11	-	3924	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-31	-16	-31	16	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTTTGTCGTTCATT	NA	False	NA	2	True	NA	NA	NA	79853247	79824762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.11	chr11	-	3824	19	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-5474	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_18	112.902394205278	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACTCATTGAGA	NA	False	NA	-25	True	NA	NA	NA	79858690	79824789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79858559
ES.5687.13	chr11	-	3907	19	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	3	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	114.257020207367	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACTCATTGAGA	NA	False	NA	-25	True	NA	NA	NA	79853213	79824789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849567_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.14	chr11	-	1897	9	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-6659	-839	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	166.318172112971	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTTGTTTGTGATAA	NA	False	NA	-1	True	AATAAA	-26	NA	79839749	79825617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832740_79833001_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716
ES.5687.15	chr11	-	3069	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-31	839	-31	-839	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTTTGTTTGTGATAA	NA	False	NA	-1	True	AATAAA	-26	NA	79853247	79825617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.16	chr11	-	6069	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-13922	-844	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	144.419729163799	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATTTGTTTGTTTGT	NA	False	NA	-6	True	AATAAA	-21	NA	79867138	79825622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79866420_79866915
ES.5687.17	chr11	-	3835	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-11921	-846	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	148.121646495929	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-19	NA	79865137	79825624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79863780_79864506
ES.5687.18	chr11	-	2946	18	NIC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-4	-846	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	115.520066712017	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-19	NA	79853209	79825624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.19	chr11	-	3835	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-11928	-846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	148.272172436751	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-19	NA	79865144	79825624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79863691_79864424
ES.5687.2	chr11	-	3758	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.483896952781	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGAGAATGTTAATCT	NA	False	NA	-15	True	NA	NA	NA	79853209	79824779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79825693_79825803_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.20	chr11	-	2949	18	NIC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-1	-847	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	117.741021300504	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGGTATTTGTTTGTT	NA	False	NA	-9	True	AATAAA	-18	NA	79853217	79825625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.21	chr11	-	4932	19	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-12305	-847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	113.122257145658	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGGTATTTGTTTGTT	NA	False	NA	-9	True	AATAAA	-18	NA	79865521	79825625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863446
ES.5687.23	chr11	-	2523	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	1	-847	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.483896952781	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGGTATTTGTTTGTT	NA	False	NA	-9	True	AATAAA	-18	NA	79853215	79825625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79825657_79826162_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.24	chr11	-	3981	19	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-4286	-847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	113.122257145658	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGGTATTTGTTTGTT	NA	False	NA	-9	True	AATAAA	-18	NA	79857502	79825625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79856378
ES.5687.26	chr11	-	2963	7	NIC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-3983	-848	intron_retention	FALSE	canonical	3	485	junction_3	14.3614066163451	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGGTATTTGTTTGT	NA	False	NA	-10	True	AATAAA	-17	NA	79837073	79825626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79834237_79836604_79836683_79837031
ES.5687.27	chr11	-	2103	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	-20	1794	-20	103	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGTTCCAGGCTAAG	NA	False	NA	0	True	AATACA	-24	NA	79853236	79826572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.29	chr11	-	3532	12	NNC	ENSMUSG00000035575.12	novel	559	4	NA	NA	-2	-10512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.473349803585	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	79853218	79837187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79839591_79839640_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ES.5687.3	chr11	-	6455	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-13924	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	133.711621723519	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATTGAGAATGTTAAT	NA	False	NA	-17	True	NA	NA	NA	79867140	79824781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79865963_79866915
ES.5687.31	chr11	-	6098	3	Intergenic	novelGene_4493	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	13	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	79867139	79854678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79859991_79865857_79866420_79866915
ES.5687.32	chr11	-	3080	3	Intergenic	novelGene_4496	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	52	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGTTTTACTATGACA	NA	False	NA	NA	False	AATAAA	-21	NA	79867140	79859329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79859689_79863466_79865963_79866915
ES.5687.33	chr11	-	3400	2	Intergenic	novelGene_4498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	79867157	79862804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79865963_79866915
ES.5687.34	chr11	-	2736	3	Intergenic	novelGene_4499	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	36.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	79867140	79862806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79863780_79864424_79865963_79866915
ES.5687.35	chr11	-	3833	2	Intergenic	novelGene_4500	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTATTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	79867139	79862810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79866420_79866915
ES.5687.36	chr11	-	2873	2	Intergenic	novelGene_4502	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTTATG	NA	False	NA	0	True	ATTAAA	-23	NA	79867142	79863316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79865963_79866915
ES.5687.37	chr11	-	2221	3	Intergenic	novelGene_4503	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	36.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	-4	True	ATTAAA	-19	NA	79867139	79863320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79863780_79864424_79865963_79866915
ES.5687.38	chr11	-	2678	3	Intergenic	novelGene_4504	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	2.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	-4	True	ATTAAA	-19	NA	79867139	79863320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79863780_79864424_79866420_79866915
ES.5687.39	chr11	-	3324	2	Intergenic	novelGene_4505	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	-4	True	ATTAAA	-19	NA	79867140	79863320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79866420_79866915
ES.5687.4	chr11	-	3926	19	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	113.122257145658	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCATTGAGAATGTTAA	NA	False	NA	-18	True	NA	NA	NA	79853215	79824782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79852989
ES.5687.40	chr11	-	2738	2	Intergenic	novelGene_4506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGGCGGTTTGTAGTCA	NA	False	NA	NA	False	AATGAA	-14	NA	79867142	79863908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79866420_79866915
ES.5687.41	chr11	-	1329	2	Intergenic	novelGene_4511	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCAGATCTTGATCTC	NA	False	NA	NA	False	NA	NA	NA	79867139	79864857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79865963_79866915
ES.5687.42	chr11	-	619	2	Intergenic	novelGene_4513	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGAGTTGCCCTTTGGGG	NA	False	NA	NA	False	ATTAAA	-17	NA	79867140	79865568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79865963_79866915
ES.5687.43	chr11	-	487	2	Intergenic	novelGene_4514	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATAACTGATCCCGGG	NA	False	NA	NA	False	AATAAA	-8	NA	79867138	79865698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79865963_79866915
ES.5687.44	chr11	-	180	1	Intergenic	novelGene_4515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATAGTTGGGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	79867138	79866958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79867000_79867100
ES.5687.6	chr11	-	3568	16	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	3513	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.341693410352	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTCATTGAGAATGTTA	NA	False	NA	-19	True	NA	NA	NA	79849680	79824783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826956_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611
ES.5687.7	chr11	-	6438	20	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-13922	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	164.401390427561	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAACTCATTGAGAA	NA	False	NA	-24	True	NA	NA	NA	79867138	79824788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844473_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79865963_79866915
ES.5687.9	chr11	-	6176	21	NNC	ENSMUSG00000035575.12	novel	3877	19	NA	NA	-13923	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	168.467051674801	463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACTCATTGAGA	NA	False	NA	-25	True	NA	NA	NA	79867139	79824789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79863433_79863780_79864506_79866420_79866915
ES.5688.1	chr11	-	653	2	Intergenic	novelGene_4516	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79883549	79868859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79868891_79882927
ES.5688.2	chr11	-	252	1	Intergenic	novelGene_4517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTCCTCTATCTTCTC	NA	False	NA	NA	False	AATAAA	-41	NA	79878824	79878572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79878600_79878800
ES.5688.3	chr11	-	256	1	Intergenic	novelGene_4518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGACAAAGAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	79880063	79879807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79879800_79880100
ES.5689.1	chr11	+	4642	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-262	-7	-262	7	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTGTTATTACTGTG	NA	False	NA	44	True	TATAAA	-29	NA	79883669	79924956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.10	chr11	+	4307	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-40	2	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	446.1818264141	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTGCATTGTTATTA	NA	False	NA	39	True	TATAAA	-24	NA	79883891	79924951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.12	chr11	+	4348	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	488.361314329189	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883892	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916686_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.14	chr11	+	4214	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-34	193	-34	-192	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATATGTACCCTT	NA	False	NA	NA	False	AATAAA	-42	NA	79883897	79924756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.15	chr11	+	5914	14	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-34	-18	intron_retention	FALSE	canonical	3	11	junction_6	544.260423220377	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTGCTTTTCTTCAT	NA	False	NA	18	True	TATAAA	-3	NA	79883897	79924930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832
ES.5689.16	chr11	+	6121	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-33	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	509.868305436697	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATGGTCTGCATTGT	NA	False	NA	34	True	TATAAA	-19	NA	79883898	79924946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79921754_79921793
ES.5689.17	chr11	+	4352	15	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-33	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	528.600559042845	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883898	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79901363_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.18	chr11	+	3772	12	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-33	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	520.909424083663	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79883898	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910570_79919973_79920173_79920832_79920913_79922670
ES.5689.19	chr11	+	5950	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	1594	junction_3	198.946408536037	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATGGTCTGCATTGT	NA	False	NA	34	True	TATAAA	-19	NA	79883898	79924946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.2	chr11	+	4068	16	NNC	ENSMUSG00000017548.16	novel	611	6	NA	NA	-206	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	510.236790345642	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883725	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79883916_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.20	chr11	+	4206	15	NNC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	-33	-22	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	638.885796699606	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTCTTCTGCTTTTCT	NA	False	NA	14	True	CATAAA	-14	NA	79883898	79924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.22	chr11	+	5045	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-33	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	509.868305436697	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79883898	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922010
ES.5689.23	chr11	+	4698	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-32	-293	-32	293	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAACGTGTGTTTTGTT	NA	False	NA	NA	False	AGTAAA	-18	NA	79883899	79925242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.24	chr11	+	3249	7	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-32	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	673.93933126226	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCTTTTCTTCATTCA	NA	False	NA	21	True	TATAAA	-6	NA	79883899	79924933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79919973_79920173_79920832_79920913_79922670
ES.5689.25	chr11	+	2888	9	ISM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	-31	10348	-31	-8227	5prime_fragment	FALSE	canonical	3	72	junction_3	588.866801046722	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGCATGTTGTGGGAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	79883900	79914600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917
ES.5689.26	chr11	+	4096	13	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-31	5919	-31	-3797	5prime_fragment	FALSE	canonical	3	1594	junction_3	213.313084976572	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAATAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	79883900	79919030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622
ES.5689.27	chr11	+	2401	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-31	2003	-31	119	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAAGCTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	79883900	79922946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.28	chr11	+	1159	8	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-30	18895	-30	1571	5prime_fragment	FALSE	canonical	3	1594	junction_3	84.9532884854365	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGGTAATATTGATG	NA	False	NA	NA	False	NA	NA	NA	79883901	79906054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968
ES.5689.29	chr11	+	2781	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-30	1622	-30	500	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAATGCTTATTTCA	NA	False	NA	NA	False	ATTAAA	-32	NA	79883901	79923327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.3	chr11	+	4359	15	FSM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	-53	-3	-53	2	multi-exon	FALSE	canonical	3	72	junction_3	508.713027037397	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTGCATTGTTATTA	NA	False	NA	39	True	TATAAA	-24	NA	79883878	79924951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.31	chr11	+	3916	12	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-29	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	595.676003231997	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883902	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.32	chr11	+	7070	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-29	-51	intron_retention	FALSE	canonical	3	1594	junction_3	197.448882560752	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTACATAAAGTTC	NA	False	NA	-15	True	ATTAAA	-19	NA	79883902	79924897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.33	chr11	+	4483	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-29	0	intron_retention	FALSE	canonical	3	1594	junction_2	197.057538473888	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883902	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.34	chr11	+	6120	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-28	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	509.868305436697	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883903	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79921758_79921796
ES.5689.35	chr11	+	4366	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-28	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	506.811733618445	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883903	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913085_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.36	chr11	+	3623	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-28	778	-28	-777	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCAGATGCAGTTCCCT	NA	False	NA	NA	False	NA	NA	NA	79883903	79924171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.37	chr11	+	5986	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-26	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	626.990894847941	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTCTTCTGCTTTTCT	NA	False	NA	14	True	CATAAA	-14	NA	79883905	79924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79921754_79921793
ES.5689.39	chr11	+	4208	14	NNC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	-21	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	546.016223180531	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTACATAAAGTTC	NA	False	NA	-15	True	ATTAAA	-19	NA	79883910	79924897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886626_79901388_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.4	chr11	+	4893	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-46	-474	-46	474	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTCCTTTTCTTTTC	NA	False	NA	6	True	NA	NA	NA	79883885	79925423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.42	chr11	+	4280	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-17	-23	combination_of_known_splicesites	FALSE	canonical	1	33	junction_5	520.963510806502	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883914	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.43	chr11	+	4325	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-17	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	510.976998830019	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATTTTGTACATAAAG	NA	False	NA	-18	True	ATTAAA	-16	NA	79883914	79924894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910514_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.44	chr11	+	4607	18	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-17	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	815.784493049694	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883914	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79913577_79913705_79915735_79915828_79915993_79916138_79916622_79916781_79917020_79917135_79919973_79920173_79920832_79920913_79922670
ES.5689.45	chr11	+	4277	14	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	545.671238560102	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883914	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.48	chr11	+	4227	14	NNC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	-15	-51	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	712.648755363194	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTACATAAAGTTC	NA	False	NA	-15	True	ATTAAA	-19	NA	79883916	79924897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898430_79904184_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.50	chr11	+	3460	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-8	-812	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	446.1818264141	2095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTATTTTTAATGTTT	NA	False	NA	NA	False	TATAAA	-20	NA	79883923	79924136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.52	chr11	+	4204	15	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-8	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	651.248412587669	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79883923	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886507_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.53	chr11	+	3440	9	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-8	12150	-8	8316	5prime_fragment	FALSE	canonical	3	1594	junction_3	79.6068464392354	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGAGTGTTCTCAGCTG	NA	False	NA	NA	False	NA	NA	NA	79883923	79912799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504
ES.5689.54	chr11	+	4404	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	510.640103747792	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATGGTCTGCATTGT	NA	False	NA	34	True	TATAAA	-19	NA	79883924	79924946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904449_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.55	chr11	+	5842	15	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-6	-23	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	692.893272253883	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883925	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79921748_79921786
ES.5689.56	chr11	+	7014	14	NIC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	-5	-14	intron_retention	FALSE	canonical	3	72	junction_3	527.916447127696	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTTCTTCATTCAT	NA	False	NA	22	True	TATAAA	-7	NA	79883926	79924934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.57	chr11	+	4380	14	NNC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_8	706.832981619651	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883927	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915743_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.58	chr11	+	6066	14	ISM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	-4	-1	-4	0	intron_retention	FALSE	canonical	3	72	junction_3	526.972406450056	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883927	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832
ES.5689.59	chr11	+	4345	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-3	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	499.405335262739	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTCTTCTGCTTTT	NA	False	NA	12	True	CATAAA	-12	NA	79883928	79924924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915999_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.6	chr11	+	4294	17	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-43	-23	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	494.861849408499	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883888	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884239_79884336_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.60	chr11	+	4466	17	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-3	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	651.297883916223	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79883928	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79917020_79917135_79919973_79920173_79920832_79920913_79922670
ES.5689.61	chr11	+	6553	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-3	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	508.314758130564	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCTTTTCTTCATTC	NA	False	NA	20	True	TATAAA	-5	NA	79883928	79924932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79917779_79920173_79920832_79920913_79922670
ES.5689.63	chr11	+	4308	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-3	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	489.072155548988	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTACATAAAGTTC	NA	False	NA	-15	True	ATTAAA	-19	NA	79883928	79924897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916142_79916642_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.64	chr11	+	4554	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-2	287	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	446.1818264141	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAGTTGTAACGTGTGT	NA	False	NA	NA	False	AGTAAA	-12	NA	79883929	79925236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.65	chr11	+	4351	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	511.080250276042	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATGGTCTGCATTGT	NA	False	NA	34	True	TATAAA	-19	NA	79883933	79924946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886587_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.66	chr11	+	4503	17	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	651.297883916223	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCTTTTCTTCATTC	NA	False	NA	20	True	TATAAA	-5	NA	79883933	79924932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79917779_79917929_79919973_79920173_79920832_79920913_79922670
ES.5689.67	chr11	+	4138	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	525.878919291411	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883933	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.68	chr11	+	4334	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	510.469483253733	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCTGTCTTCTGCTTTT	NA	False	NA	12	True	CATAAA	-12	NA	79883934	79924924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886453_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.69	chr11	+	3838	11	NIC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	621.957562861004	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883934	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.72	chr11	+	4335	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	508.314758130564	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTGCATTGTTATTAC	NA	False	NA	40	True	TATAAA	-25	NA	79883934	79924952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916743_79919973_79920173_79920832_79920913_79922670
ES.5689.73	chr11	+	8616	14	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	-20	intron_retention	FALSE	canonical	3	1594	junction_3	204.497826264109	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79883934	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.74	chr11	+	8551	13	NIC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	3	-16	intron_retention	FALSE	canonical	3	72	junction_3	549.200093823331	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCTTTTCTTCATTC	NA	False	NA	20	True	TATAAA	-5	NA	79883934	79924932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.76	chr11	+	4166	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	-20	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	665.408532824426	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79883934	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884239_79884352_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.77	chr11	+	6020	15	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	272	junction_13	460.48967392974	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883934	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832
ES.5689.78	chr11	+	2416	10	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	13	10846	13	-8724	5prime_fragment	FALSE	canonical	3	1594	junction_3	127.636637025233	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATCAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	79883944	79914103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917
ES.5689.79	chr11	+	3943	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	13	417	13	-416	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTATTTTAGGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	79883944	79924532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.8	chr11	+	6171	15	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	-41	1	-41	0	intron_retention	FALSE	canonical	3	1594	junction_3	199.18364001338	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883890	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832
ES.5689.80	chr11	+	4326	15	NNC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	700.188316505944	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883947	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886484_79886574_79886685_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.82	chr11	+	3892	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	753.355026236339	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCATGGTCTGCATTGT	NA	False	NA	34	True	TATAAA	-19	NA	79883948	79924946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884077_79886442_79886486_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
ES.5689.83	chr11	+	4218	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	19	8889	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	665.408532824426	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGGCACGTTTGTGA	NA	False	NA	NA	False	NA	NA	NA	79883950	79933838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670_79924862_79933817
ES.5689.84	chr11	+	4433	18	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	21	6305	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	636.404280551678	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATCATATGTGGTAAC	NA	False	NA	NA	False	AAAACA	-9	NA	79883952	79931254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670_79924929_79928751_79928809_79931209
ES.5689.85	chr11	+	4291	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	26	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	510.640103747792	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTCTTCTGCTTTTCT	NA	False	NA	14	True	CATAAA	-14	NA	79883957	79924926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904389_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.86	chr11	+	4264	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	112	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	508.944458877609	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATGGTCTGCATTG	NA	False	NA	33	True	TATAAA	-18	NA	79884043	79924945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920920_79922670
ES.5689.87	chr11	+	3905	14	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	129	-20	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	548.261750212033	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTCTGCTTTTCTTC	NA	False	NA	16	True	TATAAA	-1	NA	79884060	79924928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.88	chr11	+	5469	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	345	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	651.824789000507	2110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79884276	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79899877_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916686_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.89	chr11	+	5475	12	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	5949	52	3264	-51	intron_retention	FALSE	canonical	3	1709	junction_1	184.833004816298	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGTACATAAAGTTC	NA	False	NA	-15	True	ATTAAA	-19	NA	79889880	79924897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832
ES.5689.9	chr11	+	3960	17	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	494.861849408499	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883891	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79883916_79884367_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.90	chr11	+	3769	13	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	5949	0	3264	0	3prime_fragment	FALSE	canonical	3	1709	junction_1	177.323366731203	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79889880	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.91	chr11	+	4860	13	NNC	ENSMUSG00000017548.16	novel	553	4	NA	NA	7915	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	567.353945963188	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79894531	79924948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79895573_79898216_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.92	chr11	+	6292	7	NNC	ENSMUSG00000017548.16	novel	553	4	NA	NA	-4451	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1000.95115875962	2100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTCTTCTGCTTTTC	NA	False	NA	13	True	CATAAA	-13	NA	79911569	79924925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79912491_79913297_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920918_79922670
ES.5689.93	chr11	+	2862	5	ISM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	32060	0	-29	0	3prime_fragment	FALSE	canonical	3	1908	junction_4	172.296981981693	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79915991	79924949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ES.5689.94	chr11	+	4770	3	NNC	ENSMUSG00000017548.16	novel	553	4	NA	NA	3443	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	965.5	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCTTTTCTTCATTCA	NA	False	NA	21	True	TATAAA	-6	NA	79919463	79924933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79920173_79920832_79921754_79921793
ES.569.1	chr1	-	371	2	Antisense	novelGene_ENSMUSG00000089093.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGGGCAGTCTATAGCCT	NA	False	NA	NA	False	NA	NA	NA	59799067	59734458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_59734691_59798928
ES.569.2	chr1	-	178	1	Antisense	novelGene_ENSMUSG00000026020.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATGGAA	8753	False	NA	NA	False	NA	NA	NA	59754593	59754415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_59754400_59754600
ES.569.3	chr1	-	205	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTCCTTTGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	59780108	59779903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59779900_59780100
ES.569.4	chr1	-	326	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTCAGGGTCTC	NA	False	NA	NA	False	NA	NA	NA	59789298	59788972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59789000_59789300
ES.569.5	chr1	-	168	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	59796404	59796236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59796200_59796400
ES.5690.1	chr11	-	4676	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCAGTAACCTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	79894725	79890049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79890000_79894700
ES.5690.2	chr11	-	3243	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAACGAAACAA	NA	False	NA	NA	False	NA	NA	NA	79894725	79891482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79891500_79894700
ES.5691.1	chr11	-	191	1	Intergenic	novelGene_4519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	79898829	79898638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79898600_79898800
ES.5692.1	chr11	-	2092	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCACTCTTTCATGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	79904988	79902896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79902900_79905000
ES.5692.2	chr11	-	2137	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTGAGCAGTGATGT	NA	False	NA	NA	False	NA	NA	NA	79905615	79903478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79903500_79905600
ES.5692.3	chr11	-	2934	10	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAATGAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	79923620	79903488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79904421_79905967_79906060_79910501_79910609_79912915_79913095_79915734_79915826_79915991_79916138_79916622_79916779_79919971_79920173_79920832_79920912_79922669
ES.5692.4	chr11	-	1919	1	Intergenic	novelGene_4520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCTACAACACACTCTG	NA	False	NA	NA	False	NA	NA	NA	79909504	79907585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79907600_79909500
ES.5692.5	chr11	-	2791	1	Antisense	novelGene_ENSMUSG00000017548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAGAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	79923620	79920829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_79920800_79923600
ES.5693.1	chr11	-	313	1	Intergenic	novelGene_4521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCCTCTGTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	79930431	79930118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79930100_79930400
ES.5694.1	chr11	-	201	1	Intergenic	novelGene_4522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAAAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	79931772	79931571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79931600_79931800
ES.5695.1	chr11	+	177	1	Intergenic	novelGene_4523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTTAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	79940683	79940860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79940700_79940900
ES.5696.1	chr11	+	157	1	Intergenic	novelGene_4525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	79960267	79960424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79960300_79960400
ES.5697.1	chr11	+	174	1	Intergenic	novelGene_4527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	3634	False	NA	NA	False	NA	NA	NA	79966234	79966408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_79966200_79966400
ES.5698.12	chr11	-	2357	8	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	2	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.701505169833	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	4490	False	NA	-34	True	NA	NA	NA	79971815	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955220_79971609
ES.5698.13	chr11	-	3025	1	NIC	ENSMUSG00000017561.17	novel	2230	7	NA	NA	8351	-31	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	NA	False	NA	-34	True	NA	NA	NA	79940374	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79937300_79940400
ES.5698.17	chr11	-	3828	2	ISM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	29786	31	6694	-31	3prime_fragment	FALSE	canonical	3	523	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	NA	False	NA	-34	True	NA	NA	NA	79942031	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_79938564_79939417
ES.5698.19	chr11	-	2123	8	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	5	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	232.966845324411	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGGTATTTTTGTAAG	4493	False	NA	NA	False	AGTAAA	-19	NA	79971812	79937487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971708
ES.5698.2	chr11	-	2629	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	-238	5	-238	-5	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTATTTTGTGGTTT	4250	False	NA	-8	True	AATAAA	-15	NA	79972055	79937323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ES.5698.20	chr11	-	2214	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	-8	190	-8	-190	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTGGAAAAG	4480	False	NA	NA	False	NA	NA	NA	79971825	79937508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ES.5698.21	chr11	-	2044	7	NIC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	-8	-190	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	259.704586448184	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTGGAAAAG	4533	False	NA	NA	False	NA	NA	NA	79971772	79937508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79938564_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971613
ES.5698.22	chr11	-	2185	1	NIC	ENSMUSG00000017561.17	novel	2230	7	NA	NA	9032	-190	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTGGAAAAG	NA	False	NA	NA	False	NA	NA	NA	79939693	79937508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_79937500_79939700
ES.5698.23	chr11	-	1980	2	FSM	ENSMUSG00000017561.17	ENSMUST00000178280.2	1871	2	-78	-31	-25	31	multi-exon	FALSE	canonical	3	548	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTGTTTCTTGGGGTT	4463	False	NA	NA	False	NA	NA	NA	79971842	79953478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79955226_79971609
ES.5698.25	chr11	-	185	1	Intergenic	novelGene_4524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTGC	2193	False	NA	NA	False	NA	NA	NA	79960226	79960041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79960000_79960200
ES.5698.26	chr11	-	177	1	Intergenic	novelGene_4526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTTAAAAAAAAAAAAAGA	8545	False	NA	NA	False	NA	NA	NA	79965917	79965740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79965700_79965900
ES.5698.3	chr11	-	2266	7	FSM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	-67	31	-14	-31	multi-exon	FALSE	canonical	0	0	junction_1	206.037820152838	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	4474	False	NA	-34	True	NA	NA	NA	79971831	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_79938564_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ES.5698.5	chr11	-	2293	8	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	-2	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.168081190846	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	4548	False	NA	-34	True	NA	NA	NA	79971757	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79938564_79939417_79939531_79947289_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ES.5698.7	chr11	-	2186	8	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	171	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	227.779879421752	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	4789	False	NA	-34	True	NA	NA	NA	79971516	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971487
ES.5698.9	chr11	-	2099	7	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	-2	-31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	204.233526467457	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAATAAAAAATGAAA	4539	False	NA	-34	True	NA	NA	NA	79971766	79937349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_79938564_79939417_79939531_79948699_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ES.5699.1	chr11	+	7302	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	-24	-6	-24	3	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGTTTTTTTGTTTTT	5975	False	NA	31	True	ATTAAA	-26	NA	79980201	80026623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.10	chr11	+	5431	21	ISM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	11	2651	11	-2648	5prime_fragment	FALSE	canonical	3	47	junction_12	21.2185649844658	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCACTGAGCTTTACT	6010	False	NA	NA	False	ATTAAA	-9	NA	79980236	80023969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290
ES.5699.11	chr11	+	8189	23	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	11	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.1265834246443	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6010	False	NA	12	True	ATTAAA	-7	NA	79980236	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000322_80000772_80001931_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.12	chr11	+	7223	23	NIC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	29.7701942017501	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTATGGTTTTTTT	6011	False	NA	25	True	ATTAAA	-20	NA	79980237	80026617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994122_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.13	chr11	+	6937	24	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	12	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.190322564682	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAATGCTTGGTGTGTTA	6011	False	NA	6	True	ATTAAA	-1	NA	79980237	80026598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79985531_79985834_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.14	chr11	+	5987	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	13	1266	13	-1263	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGACTGTGACATTTT	6012	False	NA	NA	False	AATGAA	-21	NA	79980238	80025354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.15	chr11	+	7111	23	NNC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	13	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	32.7853335986315	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6012	False	NA	12	True	ATTAAA	-7	NA	79980238	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018208_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.16	chr11	+	6285	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	13	968	13	-965	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTGTTTCTTGTGCCT	6012	False	NA	9	True	AGTAAA	-25	NA	79980238	80025652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.17	chr11	+	3345	10	ISM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	13	25760	13	1523	5prime_fragment	FALSE	canonical	3	77	junction_5	13.9133118599987	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACAAAATGAATATTCAG	6012	False	NA	NA	False	AAAAAG	-4	NA	79980238	80000857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772
ES.5699.18	chr11	+	7160	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	13	99	13	-99	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAATGTGTATAAAGATG	6012	False	NA	-74	True	AATATA	-15	NA	79980238	80026518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.2	chr11	+	6299	23	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	-5	-966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.8108876269851	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTTGTTTCTTGTGCC	5994	False	NA	8	True	AGTAAA	-24	NA	79980220	80025651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994069_79994168_79997079_79997265_79999308_79999464_80000189_80000322_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.20	chr11	+	7279	23	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	13	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	30.7093815584502	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGTTTTTTTGTTTTT	6012	False	NA	31	True	ATTAAA	-26	NA	79980238	80026623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009776_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.23	chr11	+	7453	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	13	-194	13	191	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTCAAAGATTTATGG	6012	False	NA	NA	False	NA	NA	NA	79980238	80026811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.24	chr11	+	7443	24	NNC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.8882845693736	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGGTTTTTTTGTTTT	6013	False	NA	30	True	ATTAAA	-25	NA	79980239	80026622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988239_79988429_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.25	chr11	+	7364	24	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.4153107970733	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTATGGTTTTTTTGTT	6015	False	NA	28	True	ATTAAA	-23	NA	79980241	80026620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79987733_79987839_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.26	chr11	+	7223	23	NNC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	16	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	39.5071130743702	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6015	False	NA	12	True	ATTAAA	-7	NA	79980241	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002315_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018268_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.28	chr11	+	6621	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	66	585	66	-585	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAATGTCTTGTATCCTA	6065	False	NA	NA	False	ATTAAA	-22	NA	79980291	80026032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.29	chr11	+	6459	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	66	741	66	-738	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTGTGGACAACTTGT	6065	False	NA	NA	False	CATAAA	-16	NA	79980291	80025879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.3	chr11	+	6523	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	10	739	10	-739	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTGTGGACAACTTG	6009	False	NA	NA	False	CATAAA	-15	NA	79980235	80025878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.31	chr11	+	5684	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	318	1270	318	-1270	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATATATGACTGTG	6317	False	NA	NA	False	AATGAA	-14	NA	79980543	80025347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.32	chr11	+	6261	22	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	5285	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.5397025107581	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGTGTGTTAAAT	NA	False	NA	9	True	ATTAAA	-4	NA	79985510	80026601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000322_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.33	chr11	+	5069	22	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	-5996	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	31.2758917681925	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	NA	False	NA	12	True	ATTAAA	-7	NA	79986713	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025138
ES.5699.34	chr11	+	3140	1	NIC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	-2074	-5559	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAAGAGAAATT	NA	False	NA	NA	False	NA	NA	NA	79990635	79993775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79990600_79993800
ES.5699.35	chr11	+	4959	21	NNC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	-1572	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.5536028700294	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGTGTGTTAAAT	NA	False	NA	9	True	ATTAAA	-4	NA	79991137	80026601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80013543_80013647_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.36	chr11	+	7092	17	ISM	ENSMUSG00000017550.15	ENSMUST00000151815.8	4572	19	1764	16	645	-13	3prime_fragment	FALSE	canonical	3	79	junction_6	17.9032774583315	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	1261	False	NA	12	True	ATTAAA	-7	NA	79994473	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.37	chr11	+	4895	17	ISM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	15483	969	1880	-966	3prime_fragment	FALSE	canonical	3	47	junction_6	23.2653679048925	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTTGTTTCTTGTGCC	2496	False	NA	8	True	AGTAAA	-24	NA	79995708	80025651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.38	chr11	+	4292	15	NIC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	5175	-741	intron_retention	FALSE	canonical	3	47	junction_4	24.6762713420593	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTGTTGTGGACAACT	5791	False	NA	NA	False	CATAAA	-13	NA	79999003	80025876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79999464_80000189_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.39	chr11	+	4920	15	NIC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	5272	-16	intron_retention	FALSE	canonical	3	47	junction_4	24.6762713420593	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGTGTGTTAAAT	5888	False	NA	9	True	ATTAAA	-4	NA	79999100	80026601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79999464_80000189_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.4	chr11	+	8600	22	NIC	ENSMUSG00000017550.15	novel	7272	23	NA	NA	10	-13	intron_retention	FALSE	canonical	3	79	junction_3	18.643206832456	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6009	False	NA	12	True	ATTAAA	-7	NA	79980235	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.41	chr11	+	3992	14	ISM	ENSMUSG00000017550.15	ENSMUST00000151815.8	4572	19	8057	16	6938	-13	3prime_fragment	FALSE	canonical	3	79	junction_3	18.5175432572473	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	1523	False	NA	12	True	ATTAAA	-7	NA	80000766	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.42	chr11	+	1463	1	Intergenic	novelGene_4531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTGAGTCTATCTGAG	8797	False	NA	NA	False	NA	NA	NA	80008040	80009503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80008000_80009500
ES.5699.43	chr11	+	4266	3	NIC	ENSMUSG00000017550.15	novel	4572	19	NA	NA	27683	-13	intron_retention	FALSE	canonical	3	127	junction_2	17	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	8826	False	NA	12	True	ATTAAA	-7	NA	80021511	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80024133_80024854_80025014_80025118
ES.5699.44	chr11	+	3528	1	Genic_Genomic	ENSMUSG00000017550.15	novel	NA	NA	NA	NA	31970	2706	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAGAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	80025798	80029326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_80025800_80029300
ES.5699.5	chr11	+	7258	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	10	-2	10	2	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATGGTTTTTTTGTTTT	6009	False	NA	30	True	ATTAAA	-25	NA	79980235	80026622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.6	chr11	+	7154	22	NIC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	11	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	33.0100651179753	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGGTGTGTTAAAT	6010	False	NA	9	True	ATTAAA	-4	NA	79980236	80026601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.5699.7	chr11	+	7099	22	NIC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	11	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	31.050832436689	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGTTTTTTTGTTTTT	6010	False	NA	31	True	ATTAAA	-26	NA	79980236	80026623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80025118
ES.5699.9	chr11	+	7077	22	NIC	ENSMUSG00000017550.15	novel	7266	23	NA	NA	11	-13	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	32.6238786829135	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTGTTAAATTAT	6010	False	NA	12	True	ATTAAA	-7	NA	79980236	80026604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_79980663_79984980_79986849_79988778_79988876_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ES.57.1	chr1	+	178	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	9321222	9321400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9321200_9321400
ES.570.1	chr1	+	5973	13	FSM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	26	6900	26	-6900	multi-exon	FALSE	canonical	0	0	junction_11	3.93347457373532	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTGATTTTGGTTCT	NA	False	NA	NA	False	GATAAA	-20	NA	59802584	59911273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.10	chr1	+	8241	11	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	51849	3150	-35416	-3150	3prime_fragment	FALSE	canonical	0	0	junction_9	4.19523539268061	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGTTGTTTTTACTGA	NA	False	NA	NA	False	AATAAA	-23	NA	59854407	59915023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.11	chr1	+	8479	3	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	100520	1615	12443	-1615	3prime_fragment	FALSE	canonical	0	0	junction_1	7.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGGATGCCACTATGA	NA	False	NA	NA	False	AATAAA	-24	NA	59903078	59916558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59903113_59906494_59907775_59909393
ES.570.13	chr1	+	5158	2	NNC	ENSMUSG00000067336.7	novel	12899	13	NA	NA	20935	-1401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAGTGTATTTTTGAT	NA	False	NA	7	True	ATTAAA	-17	NA	59911570	59916772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59913991_59914034
ES.570.2	chr1	+	5464	11	NIC	ENSMUSG00000067336.7	novel	12899	13	NA	NA	39	-7054	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.98096376216491	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAATTGAGGAGTTTTC	NA	False	NA	NA	False	AATAAA	-10	NA	59802597	59911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59803888_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.3	chr1	+	5319	13	FSM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	53	7527	53	-7527	multi-exon	FALSE	canonical	0	0	junction_11	3.93347457373532	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCAGAAGTAAGTGATAG	NA	False	NA	NA	False	ATTAAA	-22	NA	59802611	59910646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.4	chr1	+	4350	13	NNC	ENSMUSG00000067336.7	novel	12899	13	NA	NA	59	-8466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.58863329931207	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAACTGCTTTAA	NA	False	NA	NA	False	TTTAAA	-16	NA	59802617	59909707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59803888_59852746_59852894_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.5	chr1	+	4081	12	ISM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	102	10335	102	-10335	5prime_fragment	FALSE	canonical	0	0	junction_11	3.62041959122543	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTAGTGACTCTTTACC	NA	False	NA	NA	False	AATAAA	-20	NA	59802660	59907838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ES.570.6	chr1	+	5524	13	FSM	ENSMUSG00000067336.7	ENSMUST00000087435.7	12899	13	323	7052	323	-7052	multi-exon	FALSE	canonical	0	0	junction_11	3.93347457373532	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGGAGTTTTCCC	NA	False	NA	NA	False	AATAAA	-12	NA	59802881	59911121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ES.570.7	chr1	+	10510	13	NNC	ENSMUSG00000067336.7	novel	12899	13	NA	NA	986	-1400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	4.15247583443366	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTGTATTTTTGATT	NA	False	NA	8	True	ATTAAA	-18	NA	59803544	59916773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59803888_59852746_59852918_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909396
ES.570.8	chr1	+	262	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	59839767	59840029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59839800_59840000
ES.570.9	chr1	+	185	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAGTACAATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	59845417	59845602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59845400_59845600
ES.5700.1	chr11	-	242	1	Intergenic	novelGene_4528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAACTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	79990050	79989808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79989800_79990000
ES.5701.1	chr11	-	186	1	Intergenic	novelGene_4529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTTCATAGT	NA	False	NA	NA	False	NA	NA	NA	79991068	79990882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_79990900_79991100
ES.5702.1	chr11	-	191	1	Intergenic	novelGene_4530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGTAATATGT	NA	False	NA	NA	False	NA	NA	NA	80001921	80001730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80001700_80001900
ES.5703.1	chr11	-	155	1	Intergenic	novelGene_4532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	80015232	80015077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80015100_80015200
ES.5704.1	chr11	-	235	1	Intergenic	novelGene_4533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AATAAA	-29	NA	80015754	80015519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80015500_80015800
ES.5705.1	chr11	-	249	1	Intergenic	novelGene_4534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCCTAAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	80019247	80018998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80019000_80019200
ES.5706.1	chr11	-	175	1	Intergenic	novelGene_4535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	80020346	80020171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80020200_80020300
ES.5707.1	chr11	-	3088	3	Antisense	novelGene_ENSMUSG00000017550.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAGTGAATTTAAACC	NA	False	NA	NA	False	AAGAAA	-9	NA	80026228	80022313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80024133_80024854_80025012_80025116
ES.5708.1	chr11	-	1310	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	4	-5	4	5	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTTTGCTTAAGTTCT	NA	False	NA	1	True	AATAAA	-19	NA	80032997	80027498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
ES.5708.11	chr11	-	2907	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	49	106	17	-106	intron_retention	FALSE	canonical	3	265	junction_2	2.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTAGTGGAAAACATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	80032952	80027609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_80028106_80028743_80028894_80030691
ES.5708.12	chr11	-	1198	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	4	107	4	-107	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTTAGTGGAAAACATT	NA	False	NA	NA	False	ATTAAA	-18	NA	80032997	80027610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
ES.5708.13	chr11	-	1427	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-12	-109	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATGTTAGTGGAAAACA	NA	False	NA	NA	False	ATTAAA	-16	NA	80032981	80027612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
ES.5708.14	chr11	-	2288	2	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	-67	1524	-67	-256	5prime_fragment	FALSE	canonical	3	266	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCCTTAAGACATCT	NA	False	NA	NA	False	AATAAA	-17	NA	80033068	80029027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_80031150_80032902
ES.5708.15	chr11	-	2466	2	ISM	ENSMUSG00000046909.10	ENSMUST00000131601.2	894	3	-30	256	2	-256	5prime_fragment	FALSE	canonical	3	38	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCCTTAAGACATCT	NA	False	NA	NA	False	AATAAA	-17	NA	80032999	80029027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_80031397_80032902
ES.5708.2	chr11	-	3732	2	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-15	4	intron_retention	FALSE	canonical	3	266	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCTTTGCTTAAGTTC	NA	False	NA	0	True	AATAAA	-18	NA	80032984	80027499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_80031150_80032902
ES.5708.3	chr11	-	4828	2	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	32	0	0	0	intron_retention	FALSE	canonical	3	270	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80032969	80027503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_80028106_80028743
ES.5708.4	chr11	-	1380	5	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	121.610803385226	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGCCTTCTTTGCTT	NA	False	NA	-6	True	AATAAA	-12	NA	80032969	80027505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80028106_80028743_80028894_80030691_80031150_80031291_80031397_80032902
ES.5708.5	chr11	-	1596	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	117.357005187874	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGCCTTCTTTGCT	NA	False	NA	-7	True	AATAAA	-11	NA	80032978	80027506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80028106_80028743_80028894_80030625_80031397_80032902
ES.5708.6	chr11	-	3043	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	16	3	16	-3	intron_retention	FALSE	canonical	3	265	junction_2	2.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTGCCTTCTTTGCT	NA	False	NA	-7	True	AATAAA	-11	NA	80032985	80027506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_80028106_80028743_80028894_80030691
ES.5708.7	chr11	-	1441	5	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.986749297676	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGCCTTCTTTGC	NA	False	NA	-8	True	AATAAA	-10	NA	80032972	80027507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80028106_80028743_80028894_80030691_80031150_80031231_80031397_80032902
ES.5708.8	chr11	-	1548	4	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	108.206592528675	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGCCTTCTTTGC	NA	False	NA	-8	True	AATAAA	-10	NA	80032997	80027507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_80028106_80028743_80028894_80030691_80031397_80032902
ES.5708.9	chr11	-	1882	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.117229415951	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGCCTTCTTTGC	NA	False	NA	-8	True	AATAAA	-10	NA	80032997	80027507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80028106_80028743_80028894_80030691_80031731_80032902
ES.5709.1	chr11	+	176	1	Intergenic	novelGene_4536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	80035706	80035882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80035700_80035900
ES.571.1	chr1	-	202	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTTCTCTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	59807912	59807710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59807700_59807900
ES.5710.1	chr11	-	156	1	Intergenic	novelGene_4537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	80037413	80037257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80037300_80037400
ES.5711.1	chr11	+	3613	12	NNC	ENSMUSG00000020709.16	novel	1785	11	NA	NA	-44	1663	intron_retention	FALSE	non_canonical	0	0	junction_10	7.17894073541805	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGGCTTCACTCTTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	80044886	80071447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80069677_80070502_80071063_80071236
ES.5711.2	chr11	+	4218	10	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	-27	-1285	-27	1285	intron_retention	FALSE	canonical	3	12	junction_2	3.01027048536535	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80044903	80071069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
ES.5711.3	chr11	+	4424	11	NNC	ENSMUSG00000020709.16	novel	1785	11	NA	NA	-27	1665	intron_retention	FALSE	non_canonical	0	0	junction_10	5.90338885725818	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTCACTCTTCAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	80044903	80071449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80071063_80071236
ES.5711.4	chr11	+	4422	11	NNC	ENSMUSG00000020709.16	novel	1785	11	NA	NA	-22	1668	intron_retention	TRUE	non_canonical	0	0	junction_10	5.90338885725818	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTCACTCTTCAAAGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	80044908	80071452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80071078_80071251
ES.5711.5	chr11	+	3297	12	NNC	ENSMUSG00000020709.16	novel	1785	11	NA	NA	-21	1665	intron_retention	FALSE	non_canonical	0	0	junction_11	6.83694388253206	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTCACTCTTCAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	80044909	80071449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80068101_80069221_80071063_80071236
ES.5711.6	chr11	+	4410	11	NNC	ENSMUSG00000020709.16	novel	1785	11	NA	NA	-17	1662	intron_retention	FALSE	non_canonical	0	0	junction_10	5.90338885725818	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGGCTTCACTCTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	80044913	80071446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80071068_80071242
ES.5711.7	chr11	+	2904	7	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	8078	-1662	8067	1662	3prime_fragment	FALSE	canonical	1	2	junction_6	6.52346193026031	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAGGCTTCACTCTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	80053008	80071446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80068101_80069221
ES.5711.8	chr11	+	4002	6	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	8104	-1665	8093	1665	intron_retention	FALSE	canonical	3	17	junction_1	1.32664991614216	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTCACTCTTCAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	80053034	80071449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
ES.5712.1	chr11	-	172	1	Intergenic	novelGene_4538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGATTC	1528	False	NA	NA	False	NA	NA	NA	80051786	80051614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80051600_80051800
ES.5713.1	chr11	-	3880	4	NNC	ENSMUSG00000086507.2	novel	984	3	NA	NA	-3606	-3563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.16024689946929	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAGAACAACGACAATGT	9130	False	NA	NA	False	NA	NA	NA	80072061	80053249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80056876_80067781_80067899_80067981_80068023_80071965
ES.5713.2	chr11	-	3701	2	NNC	ENSMUSG00000086507.2	novel	984	3	NA	NA	372	-3590	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80068083	80053276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80056876_80067981
ES.5713.3	chr11	-	184	1	Intergenic	novelGene_4539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAATAAACAAACAAAC	7228	False	NA	NA	False	NA	NA	NA	80056190	80056006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80056000_80056200
ES.5713.4	chr11	-	1211	1	Genic_Genomic	ENSMUSG00000086507.2	novel	NA	NA	NA	NA	-943	-18501	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTCAGGCCCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	80069398	80068187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_80068200_80069400
ES.5714.1	chr11	-	168	1	Intergenic	novelGene_4540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6868	False	NA	NA	False	NA	NA	NA	80074323	80074155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80074200_80074300
ES.5715.1	chr11	+	1847	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	-11	-4	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTGTGTTGAGTTCATT	NA	False	NA	30	True	NA	NA	NA	80074665	80090579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
ES.5715.2	chr11	+	1984	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	-2	2	-2	-2	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTTGAGTTCATTGG	NA	False	NA	32	True	NA	NA	NA	80074674	80090581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
ES.5715.4	chr11	+	1792	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	23	-6	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	26.4491125665032	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACTGTGTTGAGTTCA	NA	False	NA	28	True	NA	NA	NA	80074699	80090577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80075082_80080049_80080194_80087698_80087774_80089386
ES.5715.5	chr11	+	166	1	Intergenic	novelGene_4541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	80077001	80077167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80077000_80077200
ES.5715.6	chr11	+	3085	1	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	2723	19	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAGATGTATT	NA	False	NA	NA	False	NA	NA	NA	80077771	80080856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80077800_80080900
ES.5715.7	chr11	+	164	1	Intergenic	novelGene_4542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80080206	80080370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80080200_80080400
ES.5716.1	chr11	-	1229	1	Antisense	novelGene_ENSMUSG00000020707.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGGCAGATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	80085520	80084291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80084300_80085500
ES.5717.1	chr11	+	3097	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-79	669	-14	5	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTTTGTCTTCTGAGG	NA	False	NA	14	True	AATAAA	-25	NA	80099830	80157643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.13	chr11	+	3594	19	NIC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	-3	0	intron_retention	FALSE	canonical	3	150	junction_17	137.54748899342	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099877	80157638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.14	chr11	+	3161	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	3	1096	3	-1	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099883	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.15	chr11	+	3097	20	NIC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	175.267567512095	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099888	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.17	chr11	+	3050	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	53	194	-12	-120	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCGTGTCTGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	80099897	80157444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
ES.5717.18	chr11	+	2936	18	NIC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	146.729843790633	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099899	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80143792_80143913_80145485_80145689_80156567
ES.5717.19	chr11	+	3549	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	23	688	-6	-267	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTCCTTATTATT	NA	False	NA	3	True	ATTAAA	-15	NA	80099903	80158045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.2	chr11	+	2944	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-95	180	5	-151	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTCCCACCTGAAGTGA	NA	False	NA	NA	False	AATAAA	-21	NA	80099849	80157413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.20	chr11	+	4212	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-40	-1143	-5	3	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGTGCCTGGCTAAT	NA	False	NA	NA	False	NA	NA	NA	80099904	80158736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.21	chr11	+	2820	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-1	868	-1	-120	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCCGTGTCTGTGTAGT	NA	False	NA	NA	False	NA	NA	NA	80099908	80157444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.22	chr11	+	2931	19	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.361747966055	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAACCTATTTTTTCC	NA	False	NA	10	True	AATAAA	-21	NA	80099909	80157569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116462_80116907_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.23	chr11	+	2006	1	NIC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	0	-35314	mono-exon	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCTGTACATATGTCA	NA	False	NA	NA	False	NA	NA	NA	80099909	80101915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80099900_80101900
ES.5717.24	chr11	+	2932	19	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	143.584975055639	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCACAATAAACCTATTT	NA	False	NA	5	True	AATAAA	-16	NA	80099909	80157564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134310_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.25	chr11	+	5232	17	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_16	191.19385409513	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTTTTCAAGTATTTA	NA	False	NA	34	True	AATAAA	-45	NA	80099909	80157593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80142887_80154882
ES.5717.26	chr11	+	4774	18	NIC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	1	-1	intron_retention	FALSE	canonical	3	18	junction_10	143.782082323326	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACCTTTTCAAGTATTT	NA	False	NA	33	True	AATAAA	-44	NA	80099910	80157592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80143913_80145485_80145689_80156567
ES.5717.27	chr11	+	3130	20	NNC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	158.20459070702	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099910	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146664_80146784_80156567
ES.5717.28	chr11	+	2979	19	NIC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	139.752349303339	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099910	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.30	chr11	+	3242	21	NNC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.202731075026	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099910	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80123177_80123288_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.32	chr11	+	3372	22	NIC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	211.73627330504	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099910	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80155069_80155214_80156567
ES.5717.36	chr11	+	3825	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	33	402	4	19	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTTTCCTTCTGCAT	NA	False	NA	NA	False	AATAAA	-32	NA	80099913	80158331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.37	chr11	+	3119	20	NNC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	178.083720857211	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099915	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111162_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.38	chr11	+	6482	17	NIC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	7	-1	intron_retention	FALSE	canonical	3	18	junction_10	146.554597334918	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099916	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80141165_80141868_80143913_80145485_80145689_80156567
ES.5717.39	chr11	+	3784	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-25	-730	10	11	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACAACTGTTTCTTTCC	NA	False	NA	NA	False	AATAAA	-24	NA	80099919	80158323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.4	chr11	+	3757	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-51	-19	14	19	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTTTCCTTCTGCAT	NA	False	NA	NA	False	AATAAA	-32	NA	80099858	80158331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.40	chr11	+	3577	19	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	40	8748	11	4331	5prime_fragment	FALSE	canonical	3	75	junction_18	119.351126337478	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGCTTTAAGGGGATT	NA	False	NA	NA	False	NA	NA	NA	80099920	80149985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339
ES.5717.41	chr11	+	2990	19	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	142.361747966055	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099921	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116448_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.42	chr11	+	2867	16	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	198.471649248842	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	7	True	AATAAA	-18	NA	80099921	80157636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111162_80114728_80114811_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.44	chr11	+	3088	20	NNC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	175.127875717104	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099922	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124761_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.45	chr11	+	4736	20	NNC	ENSMUSG00000017686.18	novel	4260	20	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	167.990057086062	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099922	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80150077_80156567
ES.5717.47	chr11	+	2106	19	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	46	10213	-12	2866	5prime_fragment	FALSE	canonical	3	75	junction_18	119.351126337478	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACTATTTATGATAGAG	NA	False	NA	NA	False	AATACA	-13	NA	80099926	80148520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339
ES.5717.48	chr11	+	3448	18	NIC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	336	junction_17	66.9396257444698	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099926	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.49	chr11	+	3498	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-18	-451	-12	-268	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTTCCTTATTAT	NA	False	NA	2	True	ATTAAA	-14	NA	80099926	80158044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.5	chr11	+	3464	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	-45	268	-16	-268	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTTCCTTATTAT	NA	False	NA	2	True	ATTAAA	-14	NA	80099864	80158044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.50	chr11	+	3605	21	NNC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	-8	-267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	203.554482878663	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTCCTTATTATT	NA	False	NA	3	True	ATTAAA	-15	NA	80099930	80158045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80123177_80123288_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.51	chr11	+	4084	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	27	-424	-2	3	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGTGCCTGGCTAAT	NA	False	NA	NA	False	NA	NA	NA	80099936	80158736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.52	chr11	+	3952	19	NNC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	2	-251	intron_retention	FALSE	canonical	0	0	junction_17	162.340681634581	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTTTATTACATTTG	NA	False	NA	19	True	ATTAAA	-31	NA	80099940	80158061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146689_80146784_80156567
ES.5717.53	chr11	+	3315	19	NIC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	1	-137	intron_retention	FALSE	canonical	3	150	junction_17	137.54748899342	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAACCGTCCTCGAAT	NA	False	NA	NA	False	AATAAA	-35	NA	80099945	80157427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.54	chr11	+	2970	19	NNC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	143.304745211036	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099945	80157638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118112_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.56	chr11	+	3219	21	NIC	ENSMUSG00000017686.18	novel	3297	21	NA	NA	-5	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	198.494559119387	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	NA	False	NA	6	True	AATAAA	-17	NA	80099967	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80155069_80155214_80156567
ES.5717.57	chr11	+	5195	17	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	191.19385409513	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099986	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134227_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80142881_80154880
ES.5717.58	chr11	+	210	1	Intergenic	novelGene_4543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGGAAAGCCACGTGA	NA	False	NA	NA	False	TATAAA	-26	NA	80109306	80109516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80109300_80109500
ES.5717.59	chr11	+	2448	13	ISM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	24873	1143	-8683	-3	3prime_fragment	FALSE	canonical	3	75	junction_11	178.366721952275	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGACCTTTTCAAGTAT	NA	False	NA	31	True	AATAAA	-42	NA	80124753	80157590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.6	chr11	+	3007	19	NNC	ENSMUSG00000017686.18	novel	3687	19	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	186.744891017098	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACCTATTTTTTCCAT	NA	False	NA	12	True	AATAAA	-23	NA	80099865	80157571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111162_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133400_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ES.5717.60	chr11	+	2185	10	ISM	ENSMUSG00000017686.18	ENSMUST00000134894.2	2188	11	757	-66	757	-2	3prime_fragment	FALSE	canonical	3	75	junction_8	198.112637870356	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGAGGTTTTTTGTCT	NA	False	NA	7	True	AATAAA	-18	NA	80134193	80157636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ES.5717.61	chr11	+	1952	8	ISM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	37547	-44	-3008	-1	3prime_fragment	FALSE	canonical	3	150	junction_6	192.94252078412	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	912	False	NA	8	True	AATAAA	-19	NA	80137491	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.62	chr11	+	1572	5	ISM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	41923	-42	1368	-3	3prime_fragment	FALSE	canonical	3	150	junction_3	195.511508612665	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGAGGTTTTTTGTC	34	False	NA	6	True	AATAAA	-17	NA	80141867	80157635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.63	chr11	+	5190	3	ISM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	42792	-2031	-621	1610	3prime_fragment	FALSE	canonical	3	336	junction_2	104	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCAGATGGATGCCT	868	False	NA	NA	False	AAAACA	-4	NA	80142701	80160343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80143913_80145485_80145689_80156567
ES.5717.64	chr11	+	159	1	Intergenic	novelGene_4545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAAGTAA	3013	False	NA	NA	False	NA	NA	NA	80144846	80145005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80144800_80145000
ES.5717.65	chr11	+	4719	2	NNC	ENSMUSG00000017686.18	novel	1347	2	NA	NA	-2020	-1	intron_retention	FALSE	canonical	0	0	junction_1	0	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80152856	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80154323_80154384
ES.5717.7	chr11	+	3858	20	NNC	ENSMUSG00000017686.18	novel	3029	20	NA	NA	-15	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	158.20459070702	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGACAACTGTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	80099865	80158320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146664_80146784_80156567
ES.5717.8	chr11	+	3153	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	-79	-45	-15	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099865	80157638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ES.5717.9	chr11	+	3269	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	27	1	-9	-1	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGGTTTTTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	80099871	80157637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
ES.5718.1	chr11	-	4549	3	Antisense	novelGene_ENSMUSG00000017686.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCTAAATT	8891	False	NA	NA	False	NA	NA	NA	80134114	80121137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80124315_80124752_80124855_80132844
ES.5718.2	chr11	-	1076	1	Intergenic	novelGene_4544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	80123400	80122324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80122300_80123400
ES.5719.1	chr11	-	188	1	Intergenic	novelGene_4546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80170662	80170474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80170500_80170700
ES.572.1	chr1	-	151	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	59812825	59812674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59812700_59812800
ES.5720.1	chr11	+	177	1	Intergenic	novelGene_4547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAGAGAGT	26	False	NA	NA	False	NA	NA	NA	80171511	80171688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80171500_80171700
ES.5720.2	chr11	+	389	1	Intergenic	novelGene_4548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAAAAAAATTTT	27	False	NA	NA	False	NA	NA	NA	80171512	80171901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80171500_80171900
ES.5721.1	chr11	-	166	2	Intergenic	novelGene_4550	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	12	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80179042	80177018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80177135_80178992
ES.5721.2	chr11	-	390	1	Intergenic	novelGene_4549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80177408	80177018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80177000_80177400
ES.5721.3	chr11	-	177	1	Intergenic	novelGene_4551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAGAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80177407	80177230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80177200_80177400
ES.5722.1	chr11	+	182	1	Intergenic	novelGene_4552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTGAAGAGAGA	5306	False	NA	NA	False	NA	NA	NA	80189218	80189400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80189200_80189400
ES.5723.1	chr11	+	3811	8	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-67	32	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.25876975726313	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTGCCTGTGTCTGG	7758	False	NA	NA	False	NA	NA	NA	80191670	80246813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80192098_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ES.5723.2	chr11	+	3672	8	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-66	32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	3.04389653609465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTGCCTGTGTCTGG	7759	False	NA	NA	False	NA	NA	NA	80191671	80246813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80192098_80193489_80193514_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237710_80244237
ES.5723.3	chr11	+	1065	3	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-59	-313	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAGTGTCAGGTTCTC	7766	False	NA	NA	False	NA	NA	NA	80191678	80214671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80192098_80210383_80210543_80214184
ES.5723.4	chr11	+	3657	4	ISM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	-52	29535	-52	2262	5prime_fragment	FALSE	canonical	2	6	junction_3	1.69967317119759	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTGCTTCGCGTGAA	7773	False	NA	NA	False	ATTAAA	-16	NA	80191685	80217246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184
ES.5723.5	chr11	+	3619	7	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	-47	19	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.42670329642684	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCCATGCTACCTGCTT	7778	False	NA	NA	False	ATTAAA	-42	NA	80191690	80246800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80192098_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ES.5723.6	chr11	+	3765	9	FSM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	-30	1	-30	-1	multi-exon	FALSE	canonical	2	4	junction_6	1.93649167310371	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGGGAGTGACCTCAAG	7795	False	NA	NA	False	ATTAAA	-22	NA	80191707	80246780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ES.5723.7	chr11	+	176	1	Intergenic	novelGene_4554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAACTGAAAC	NA	False	NA	NA	False	NA	NA	NA	80236431	80236607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80236400_80236600
ES.5724.1	chr11	-	225	1	Intergenic	novelGene_4553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCTATAAATTATTTAT	NA	False	NA	NA	False	CATAAA	-4	NA	80220730	80220505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80220500_80220700
ES.5725.1	chr11	+	178	1	Intergenic	novelGene_4555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	80249513	80249691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80249500_80249700
ES.5726.1	chr11	+	1771	2	Antisense	novelGene_ENSMUSG00000057181.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	80255886	80257849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_80256097_80256288
ES.5726.2	chr11	+	1964	1	Intergenic	novelGene_4556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80255886	80257850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80255900_80257800
ES.5727.1	chr11	+	157	1	Intergenic	novelGene_4557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACAAAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	80262206	80262363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80262200_80262400
ES.5728.1	chr11	-	4550	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.825674724525	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAATAGTGTTTGTTC	NA	False	NA	NA	False	ATTAAA	-1	NA	80268834	80251312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254861_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.10	chr11	-	4443	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.825674724525	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268835	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254764_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.11	chr11	-	4379	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	61	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.825674724525	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268780	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254755_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.12	chr11	-	4534	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.9409176797133	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268840	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264460_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.13	chr11	-	3557	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	48	949	29	-949	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGCTCAATGGATAAAGG	NA	False	NA	NA	False	NA	NA	NA	80268812	80252267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.14	chr11	-	3291	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	20	1243	1	-1243	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTGAGTCTCTAAAAT	NA	False	NA	NA	False	ATTAAA	-23	NA	80268840	80252561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.15	chr11	-	2841	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	38	1675	19	-1675	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGTTTAGAAAATCAGAA	NA	False	NA	NA	False	AATAAA	-17	NA	80268822	80252993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.16	chr11	-	3053	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	22	1637	intron_retention	FALSE	canonical	0	0	junction_3	35.1883819210577	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGCTCATTGATT	NA	False	NA	NA	False	ATTAAA	-22	NA	80268819	80253167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259419_80260979_80261040_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.17	chr11	-	2683	10	NNC	ENSMUSG00000057181.16	novel	4536	10	NA	NA	25	1629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.825674724525	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTCAACACAATTGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	80268816	80253175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264531_80264876_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.18	chr11	-	2628	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	46	1880	27	1606	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAAATGTAAAC	NA	False	NA	NA	False	NA	NA	NA	80268814	80253198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.19	chr11	-	2460	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	31	2063	12	1423	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGAATGCACATGT	NA	False	NA	NA	False	NA	NA	NA	80268829	80253381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.20	chr11	-	1463	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	26	3065	7	421	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTCTGGAGATGAGT	NA	False	NA	68	True	CATAAA	-20	NA	80268834	80254383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.3	chr11	-	4541	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	14	-1	-5	0	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGCTTAAATAGTGTT	NA	False	NA	NA	False	TTTAAA	-4	NA	80268846	80251317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.4	chr11	-	3810	11	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3183112986195	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGCTTAAATAGTGTT	NA	False	NA	NA	False	TTTAAA	-4	NA	80268844	80251317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80253574_80254302_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.5	chr11	-	4538	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	30.825674724525	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAGGCTTAAATAGTG	NA	False	NA	NA	False	TTTAAA	-2	NA	80268840	80251319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264518_80264888_80265044_80266332_80266459_80267628_80267710_80268667
ES.5728.6	chr11	-	5813	9	NIC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	6	-5	intron_retention	FALSE	canonical	2	53	junction_6	17.4172149036521	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268835	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80266459_80267628_80267710_80268667
ES.5728.7	chr11	-	4560	10	NNC	ENSMUSG00000057181.16	novel	4554	10	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	38.2151156184094	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268828	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80264998_80266332_80266459_80267628_80267710_80268578
ES.5728.9	chr11	-	4485	10	NNC	ENSMUSG00000057181.16	novel	4536	10	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	38.6372812989325	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	80268812	80251323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264531_80264876_80264998_80266332_80266459_80267628_80267710_80268667
ES.5729.1	chr11	+	173	1	Intergenic	novelGene_4558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGGAAGGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	80269452	80269625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80269500_80269600
ES.573.1	chr1	-	217	1	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATTCTGGTAGAATT	NA	False	NA	NA	False	TATAAA	-20	NA	59881453	59881236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59881200_59881500
ES.5730.1	chr11	-	287	1	Intergenic	novelGene_4559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAATAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80270167	80269880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80269900_80270200
ES.5731.1	chr11	+	298	1	Intergenic	novelGene_4560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTCTGTCTCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80271085	80271383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80271100_80271400
ES.5732.1	chr11	-	161	1	Intergenic	novelGene_4561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGGTTTTGTTTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	80274027	80273866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80273900_80274000
ES.5733.1	chr11	+	2277	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-29	-3	-5	3	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACATGATTGAATTCT	NA	False	NA	133	True	AATAAA	-21	NA	80274099	80287077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.11	chr11	+	3213	16	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	8	98	intron_retention	FALSE	canonical	0	0	junction_14	436.855429938403	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTGATTTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	80274112	80295745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293474_80293551_80294426
ES.5733.12	chr11	+	2086	10	NNC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	-6	-110	intron_retention	FALSE	canonical	0	0	junction_8	412.921060820511	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATTTATGCCTTTTT	NA	False	NA	17	True	AATAAA	-6	NA	80274122	80286961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80285111_80285358_80285931_80286088_80286215
ES.5733.13	chr11	+	3107	18	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-5	138	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	451.713531108878	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAGTGTATGTGATA	NA	False	NA	NA	False	AATAAA	-13	NA	80274123	80296697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293474_80293538_80294190_80294235_80294426_80294489_80295566
ES.5733.14	chr11	+	4777	11	FSM	ENSMUSG00000017421.19	ENSMUST00000165565.8	2311	11	19	-2485	-5	2482	multi-exon	FALSE	canonical	3	18	junction_5	381.677992553933	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGGAGGCCTGATGTG	NA	False	NA	3	True	AGTAAA	-19	NA	80274123	80289556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.15	chr11	+	2230	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-97	-571	-3	-108	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATGCCTTTTTAT	NA	False	NA	19	True	AATAAA	-8	NA	80274125	80286963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.16	chr11	+	2380	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-3	-132	-3	132	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTTGTGTATGTTTTA	NA	False	NA	NA	False	NA	NA	NA	80274125	80287206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.17	chr11	+	3855	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	-1	-103	intron_retention	FALSE	canonical	3	28	junction_2	358.33676851451	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274127	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.18	chr11	+	1753	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	1	491	1	191	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTATGGCTTCTTTTT	NA	False	NA	21	True	AATAAA	-29	NA	80274129	80286583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.19	chr11	+	4108	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-89	-2457	5	1775	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGGTCAGGTTTTTA	NA	False	NA	NA	False	GATAAA	-22	NA	80274133	80288849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.2	chr11	+	1868	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-115	-191	3	191	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTATGGCTTCTTTTT	NA	False	NA	21	True	AATAAA	-29	NA	80274107	80286583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.21	chr11	+	2112	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	10	-108	intron_retention	FALSE	canonical	3	172	junction_7	258.380823591845	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATGCCTTTTTAT	NA	False	NA	19	True	AATAAA	-8	NA	80274138	80286963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.22	chr11	+	3466	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	11	199	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	358.33676851451	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCTTTTTCATGTTTC	NA	False	NA	29	True	AATAAA	-37	NA	80274139	80286591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.23	chr11	+	5710	10	NIC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	11	2906	intron_retention	FALSE	canonical	3	695	junction_8	108.672915066891	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGATTTTGGAAGTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	80274139	80289980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80286088_80286215
ES.5733.24	chr11	+	5119	8	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	11	106	11	-103	intron_retention	FALSE	canonical	3	903	junction_7	56.3451462878932	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274139	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660
ES.5733.25	chr11	+	3853	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	13	-1	intron_retention	FALSE	canonical	3	28	junction_2	290.76595399049	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGATACATGATTGAA	NA	False	NA	129	True	AATAAA	-17	NA	80274141	80287073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.26	chr11	+	3886	10	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	13	-103	intron_retention	FALSE	canonical	3	172	junction_7	332.338441210422	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274141	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80283909_80286088_80286215
ES.5733.27	chr11	+	2197	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	-14	-112	intron_retention	FALSE	canonical	3	172	junction_7	342.859752548116	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAAAATTTATGCCTTT	NA	False	NA	15	True	AATAAA	-4	NA	80274142	80286959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.28	chr11	+	3860	17	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-14	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	452.4145249036	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTGTATGTGATACTT	NA	False	NA	NA	False	AATAAA	-16	NA	80274142	80296700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293474_80293538_80294190_80294235_80294426_80294890_80295105
ES.5733.29	chr11	+	3527	17	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-13	5	intron_retention	FALSE	canonical	1	1	junction_16	459.172110807865	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATAAATGTCGTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	80274143	80296564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293471_80293538_80294190_80294235_80294426_80294489_80295566
ES.5733.3	chr11	+	3762	11	NIC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	3	-103	intron_retention	FALSE	canonical	3	261	junction_8	296.4902865188	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274107	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.30	chr11	+	3009	17	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-12	138	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	453.117051654426	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAGTGTATGTGATA	NA	False	NA	NA	False	AATAAA	-13	NA	80274144	80296697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293471_80293551_80294190_80294235_80294426_80294489_80295566
ES.5733.31	chr11	+	3491	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	-9	325	intron_retention	FALSE	canonical	3	28	junction_2	290.76595399049	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTATTTGTAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	80274147	80286717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.32	chr11	+	4798	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-69	-3167	-3	2485	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGCCTGATGTGTTT	NA	False	NA	6	True	AGTAAA	-22	NA	80274153	80289559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.33	chr11	+	1865	12	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-2	-121	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_11	334.386004491815	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATGAGACAAAAATT	NA	False	NA	6	True	NA	NA	NA	80274154	80286950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617
ES.5733.34	chr11	+	4020	15	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	-2	138	intron_retention	FALSE	canonical	0	0	junction_14	426.152824221355	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAGTGTATGTGATA	NA	False	NA	NA	False	AATAAA	-13	NA	80274154	80296697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293471_80293538_80294426
ES.5733.35	chr11	+	3913	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-68	-2283	-2	1601	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTTACCTAATTGCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	80274154	80288675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.36	chr11	+	4656	10	NIC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	-2	2485	intron_retention	FALSE	canonical	3	18	junction_5	315.175357813455	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGCCTGATGTGTTT	NA	False	NA	6	True	AGTAAA	-22	NA	80274154	80289559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.37	chr11	+	2204	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-1	intron_retention	FALSE	canonical	3	172	junction_7	258.380823591845	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGATACATGATTGAA	NA	False	NA	129	True	AATAAA	-17	NA	80274156	80287073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.38	chr11	+	3118	17	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	0	96	intron_retention	FALSE	canonical	0	0	junction_10	457.529776182655	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTCTGATTTGGTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	80274156	80295743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80283909_80284003_80285111_80285287_80285927_80286088_80286215_80286400_80286617_80286702_80289241_80289297_80293471_80293538_80294190_80294235_80294426
ES.5733.39	chr11	+	3733	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-103	intron_retention	FALSE	canonical	3	28	junction_2	290.76595399049	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274156	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.4	chr11	+	2730	10	NIC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	3	-103	intron_retention	FALSE	canonical	3	695	junction_8	108.672915066891	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274107	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80286088_80286215
ES.5733.40	chr11	+	4386	10	NIC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-121	intron_retention	FALSE	canonical	3	852	junction_8	70.3167436990966	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATGAGACAAAAATT	NA	False	NA	6	True	NA	NA	NA	80274156	80286950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80285358_80285927_80286088_80286215
ES.5733.41	chr11	+	1610	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	306.336155228207	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGTATGGCTTCTTTTT	NA	False	NA	21	True	AATAAA	-29	NA	80274156	80286583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285242_80285927_80286088_80286215
ES.5733.43	chr11	+	6207	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	29	-3991	1	3991	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACTAGTGGTGTCTTCT	NA	False	NA	NA	False	AATAAA	-37	NA	80274157	80291065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.44	chr11	+	1887	12	ISM	ENSMUSG00000017421.19	ENSMUST00000178665.8	2898	17	53	9596	1	-108	5prime_fragment	FALSE	canonical	3	91	junction_11	267.79040774333	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATGCCTTTTTAT	NA	False	NA	19	True	AATAAA	-8	NA	80274157	80286963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617
ES.5733.45	chr11	+	12276	10	NIC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	1	5	intron_retention	FALSE	canonical	3	695	junction_8	108.672915066891	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATAAATGTCGTTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	80274157	80296564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80286088_80286215
ES.5733.47	chr11	+	3931	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	28	junction_2	358.33676851451	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274157	80287074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.48	chr11	+	4049	27	Fusion	ENSMUSG00000017428.17_ENSMUSG00000017421.19	novel	2898	17	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_14	390.276635312705	850	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80274157	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80286088_80286215_80286702_80289241_80289297_80293471_80293538_80294190_80294235_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.5	chr11	+	2163	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-21	103	3	-100	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTTTTTATTCATAACC	NA	False	NA	27	True	AATAAA	-16	NA	80274107	80286971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.50	chr11	+	3819	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	29	-1603	1	1603	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTACCTAATTGCTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	80274157	80288677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.52	chr11	+	3808	11	NIC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	7	-1	intron_retention	FALSE	canonical	3	261	junction_8	296.4902865188	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTGATACATGATT	NA	False	NA	126	True	AATAAA	-14	NA	80274163	80287070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.53	chr11	+	2882	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	30	-108	intron_retention	FALSE	canonical	0	0	junction_3	368.869862155492	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATGCCTTTTTAT	NA	False	NA	19	True	AATAAA	-8	NA	80274186	80286963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274322_80276728_80276856_80277005_80277812_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.55	chr11	+	3948	11	NNC	ENSMUSG00000017421.19	novel	3279	11	NA	NA	101	-103	intron_retention	FALSE	canonical	0	0	junction_1	378.205354271988	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80274323	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80274655_80276679_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.56	chr11	+	2033	11	ISM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	2505	-569	45	-110	3prime_fragment	FALSE	canonical	3	261	junction_8	292.648748502364	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATTTATGCCTTTTT	NA	False	NA	17	True	AATAAA	-6	NA	80276727	80286961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.57	chr11	+	1577	10	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	144	-108	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	386.80661579747	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATGCCTTTTTAT	NA	False	NA	19	True	AATAAA	-8	NA	80276826	80286963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215_80286400_80286617
ES.5733.58	chr11	+	2502	9	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	1250	-103	intron_retention	FALSE	canonical	3	172	junction_5	273.411663065057	458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTTTTTATTCATA	NA	False	NA	24	True	AATAAA	-13	NA	80277932	80286968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.59	chr11	+	4553	10	ISM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	4354	-3166	-1380	2484	3prime_fragment	FALSE	canonical	3	261	junction_7	296.91791275297	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGGCCTGATGTGTT	NA	False	NA	5	True	AGTAAA	-21	NA	80278576	80289558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.6	chr11	+	4751	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-21	-2485	3	2485	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGCCTGATGTGTTT	NA	False	NA	6	True	AGTAAA	-22	NA	80274107	80289559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.60	chr11	+	4196	8	ISM	ENSMUSG00000017421.19	ENSMUST00000123726.2	3279	11	122	6090	122	2483	intron_retention	FALSE	canonical	3	261	junction_5	310.899813247855	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGAGGCCTGATGTGT	NA	False	NA	4	True	AGTAAA	-20	NA	80280078	80289557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.61	chr11	+	3503	2	ISM	ENSMUSG00000017421.19	ENSMUST00000123726.2	3279	11	5970	6090	5970	2483	intron_retention	FALSE	canonical	3	1055	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGAGGCCTGATGTGT	NA	False	NA	4	True	AGTAAA	-20	NA	80285926	80289557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80286088_80286215
ES.5733.62	chr11	+	439	5	NNC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	9296	98	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	21.3600093632938	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTGATTTGGTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	80289252	80295745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80289297_80293471_80293538_80294190_80294235_80294426_80294489_80295522
ES.5733.63	chr11	+	4980	2	NNC	ENSMUSG00000017421.19	novel	3279	11	NA	NA	10238	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTGTATGTGATACTT	NA	False	NA	NA	False	AATAAA	-16	NA	80290194	80296700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80293580_80295105
ES.5733.64	chr11	+	6256	1	Genic_Genomic	ENSMUSG00000017421.19	novel	NA	NA	NA	NA	10488	141	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTGTATGTGATACTT	NA	False	NA	NA	False	AATAAA	-16	NA	80290444	80296700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_80290400_80296700
ES.5733.65	chr11	+	1485	1	Intergenic	novelGene_4562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGCTGGAGTGCTCAT	NA	False	NA	19	True	AATAAA	-20	NA	80297901	80299386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80297900_80299400
ES.5733.66	chr11	+	177	1	Intergenic	novelGene_4564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGTGAGACC	2582	False	NA	NA	False	NA	NA	NA	80303459	80303636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80303500_80303600
ES.5733.67	chr11	+	2853	1	Intergenic	novelGene_4565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTACATTTACACAACA	4919	False	NA	NA	False	NA	NA	NA	80305796	80308649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80305800_80308600
ES.5733.68	chr11	+	1355	1	Intergenic	novelGene_4567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATGCAGTCTGTGTGC	9323	False	NA	NA	False	AATAAA	-17	NA	80310200	80311555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80310200_80311600
ES.5733.69	chr11	+	1591	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	-21	1278	-11	61	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGCTCTCTGCCTCC	NA	False	NA	17	True	NA	NA	NA	80319429	80362796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.7	chr11	+	4016	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-20	-1751	4	1751	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAAGCCTGTCGGCTTCC	NA	False	NA	NA	False	AATGAA	-11	NA	80274108	80288825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.70	chr11	+	1775	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	-21	1094	-11	-152	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTTTTCCTTTTCAT	NA	False	NA	NA	False	AAAACA	-16	NA	80319429	80362980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.71	chr11	+	1755	14	NIC	ENSMUSG00000017428.17	novel	1626	13	NA	NA	-11	0	intron_retention	FALSE	canonical	2	12	junction_3	372.519790189515	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319429	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80329346_80329457_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.72	chr11	+	1665	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	-14	-25	-6	25	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTCTAAATAAAAGGAAAA	NA	False	NA	-19	True	NA	NA	NA	80319434	80362760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.75	chr11	+	2298	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	-1	551	1	391	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACCCTCATGTCTCCTT	NA	False	NA	NA	False	ATTAAA	-28	NA	80319449	80363523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.76	chr11	+	2845	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	-1	4	1	-4	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGTCCTTTCTTGAG	NA	False	NA	12	True	AATAAA	-16	NA	80319449	80364070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.77	chr11	+	2964	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	1	-1339	1	0	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	16	True	AATAAA	-20	NA	80319449	80364074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.79	chr11	+	1495	14	NNC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	281.441492338048	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319455	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80319582_80322530_80322633_80329085_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.8	chr11	+	2359	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-114	-683	4	1	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGATACATGATTGAATT	NA	False	NA	131	True	AATAAA	-19	NA	80274108	80287075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ES.5733.80	chr11	+	1993	15	Fusion	ENSMUSG00000017428.17_ENSMUSG00000048895.14	novel	2848	14	NA	NA	5	-8	multi-exon	FALSE	canonical	0	0	junction_14	424.377671612522	361	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTCACATCCTGTTTGT	NA	False	NA	19	True	AATAAA	-12	NA	80319455	80372002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_80319582_80322530_80322633_80329076_80329202_80329346_80329457_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80371423
ES.5733.81	chr11	+	1307	13	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	31	junction_5	285.998348868583	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319457	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.82	chr11	+	1246	11	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	316.156986321669	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319458	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.84	chr11	+	1450	14	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	9	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	281.900796684929	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAAGGTGTCCTTTCTTG	NA	False	NA	10	True	AATAAA	-14	NA	80319459	80364068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80363918
ES.5733.88	chr11	+	1487	14	NNC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	282.687231770233	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319466	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351561_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.9	chr11	+	3138	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	-20	-873	4	873	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTTAAATCTGAATGT	NA	False	NA	NA	False	AGTAAA	-17	NA	80274108	80287947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ES.5733.90	chr11	+	2310	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	21	-705	0	308	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATAGTGAACATTAG	NA	False	NA	NA	False	NA	NA	NA	80319469	80363440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.91	chr11	+	1484	14	NNC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	283.348427489808	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319471	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336802_80347073_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.92	chr11	+	1357	13	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	290.910484036279	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319477	80362735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.93	chr11	+	2591	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	27	230	6	-230	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATTTTGTTGTACCA	NA	False	NA	11	True	AATAAA	-13	NA	80319477	80363844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ES.5733.94	chr11	+	1551	12	NIC	ENSMUSG00000017428.17	novel	1626	13	NA	NA	-5	25	intron_retention	FALSE	canonical	1	18	junction_8	301.75557948788	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTCTAAATAAAAGGAAAA	NA	False	NA	-19	True	NA	NA	NA	80319485	80362760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.95	chr11	+	1293	10	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	16617	-25	-11128	25	3prime_fragment	FALSE	canonical	3	918	junction_2	45.3676340822642	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTCTAAATAAAAGGAAAA	NA	False	NA	-19	True	NA	NA	NA	80336065	80362760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ES.5733.96	chr11	+	3862	1	FSM	ENSMUSG00000048895.14	ENSMUST00000053413.12	4162	1	-323	623	-323	-623	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACAAAAACCCCTTTATT	NA	False	NA	NA	False	NA	NA	NA	80367525	80371387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80367500_80371400
ES.5733.97	chr11	+	4132	1	FSM	ENSMUSG00000048895.14	ENSMUST00000053413.12	4162	1	25	5	-8	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCACATCCTGTTTGTGGC	NA	False	NA	22	True	AATAAA	-15	NA	80367873	80372005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80367900_80372000
ES.5734.1	chr11	-	3175	1	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGACACCCTCGTTCTA	NA	False	NA	NA	False	NA	NA	NA	80277321	80274146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80274100_80277300
ES.5734.10	chr11	-	3894	10	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAATCATATCACCCA	NA	False	NA	NA	False	NA	NA	NA	80295108	80280222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80282225_80282657_80282817_80283907_80284003_80285111_80285287_80285927_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293537_80294192
ES.5734.11	chr11	-	3026	10	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAATCATATCACCCA	NA	False	NA	NA	False	NA	NA	NA	80295105	80280222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293536_80294188
ES.5734.12	chr11	-	5846	3	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAATCATATCACCCA	NA	False	NA	NA	False	NA	NA	NA	80288794	80280222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80282225_80282657_80282817_80285109
ES.5734.13	chr11	-	4096	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAATCATATCACCCA	NA	False	NA	NA	False	NA	NA	NA	80284751	80280222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80282225_80282657
ES.5734.14	chr11	-	14305	3	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-37	NA	80295111	80280243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80282233_80282667_80286087_80286214
ES.5734.15	chr11	-	2554	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-37	NA	80283231	80280243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80282233_80282666
ES.5734.16	chr11	-	4188	5	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-37	NA	80288794	80280243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80280648_80282156_80282225_80282657_80282817_80285109_80286087_80286214
ES.5734.17	chr11	-	4770	1	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGGGAATCATTACA	NA	False	NA	NA	False	NA	NA	NA	80298918	80294148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80294100_80298900
ES.5734.18	chr11	-	769	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGGGAATCATTACA	NA	False	NA	NA	False	NA	NA	NA	80295109	80294148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80294233_80294424
ES.5734.2	chr11	-	5936	3	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAAAATTGTTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	80281930	80274848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279970_80280078
ES.5734.20	chr11	-	4025	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGGGAATCATTACA	NA	False	NA	NA	False	NA	NA	NA	80298918	80294148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80294365_80295109
ES.5734.21	chr11	-	4562	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGGGAATCATTACA	NA	False	NA	NA	False	NA	NA	NA	80298918	80294148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80294897_80295104
ES.5734.3	chr11	-	4465	15	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	80295110	80274870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80276854_80278625_80278765_80279801_80279970_80280078_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80285355_80285924_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293551_80294190
ES.5734.4	chr11	-	2099	2	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	80277322	80274870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80275962_80276314
ES.5734.5	chr11	-	3477	14	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGCACCAGCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80295104	80277326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279970_80280078_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80285109_80285355_80285924_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293536_80294188_80294233_80294424
ES.5734.6	chr11	-	3529	14	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGCACCAGCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80295108	80277326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279970_80280078_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80285355_80285924_80286087_80286214_80286397_80286614_80286697_80289237_80289292_80293467_80293536_80294424
ES.5734.7	chr11	-	3578	15	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGCACCAGCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80295112	80277326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279970_80280078_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80285355_80285924_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293536_80294188_80294233_80294424
ES.5734.8	chr11	-	4345	13	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	256	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGCACCAGCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80295104	80277326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279970_80280078_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80286087_80286214_80286397_80286614_80286700_80289239_80289292_80293467_80293551_80294190
ES.5734.9	chr11	-	3544	14	Antisense	novelGene_ENSMUSG00000017421.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGCACCAGCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	80295112	80277326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80278765_80279801_80279971_80280080_80280155_80280597_80280648_80282156_80282225_80282657_80282817_80283907_80284003_80285111_80285355_80285924_80286087_80286214_80286397_80286614_80286700_80289239_80289295_80293472_80293549_80294424
ES.5735.1	chr11	-	3188	1	Intergenic	novelGene_4563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAAGTGTACGGGCGT	NA	False	NA	NA	False	NA	NA	NA	80302125	80298937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80298900_80302100
ES.5736.1	chr11	-	171	1	Intergenic	novelGene_4566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAGGAACAAG	NA	False	NA	NA	False	NA	NA	NA	80309732	80309561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80309600_80309700
ES.5737.1	chr11	-	195	1	Intergenic	novelGene_4568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCGAGACAGGGTTTC	NA	False	NA	3	True	NA	NA	NA	80317455	80317260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80317300_80317500
ES.5738.1	chr11	-	133	1	Intergenic	novelGene_4569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80320700	80320567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80320600_80320700
ES.5739.1	chr11	-	177	1	Intergenic	novelGene_4570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	80331778	80331601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80331600_80331800
ES.574.1	chr1	-	165	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGCTCCAGACTAG	NA	False	NA	NA	False	NA	NA	NA	59927754	59927589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59927600_59927800
ES.5740.1	chr11	-	150	1	Intergenic	novelGene_4571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAGATTGT	NA	False	NA	NA	False	NA	NA	NA	80334745	80334595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80334600_80334700
ES.5741.1	chr11	-	5150	1	Antisense	novelGene_ENSMUSG00000017428.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGGGTGGGGGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	80340518	80335368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_80335400_80340500
ES.5742.1	chr11	-	177	1	Intergenic	novelGene_4572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGAG	NA	False	NA	NA	False	NA	NA	NA	80347501	80347324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80347300_80347500
ES.5743.1	chr11	-	178	1	Intergenic	novelGene_4573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTGTATG	NA	False	NA	NA	False	NA	NA	NA	80354851	80354673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80354700_80354900
ES.5744.1	chr11	-	387	1	Intergenic	novelGene_4574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80357470	80357083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80357100_80357500
ES.5744.2	chr11	-	1771	1	Intergenic	novelGene_4575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	80359032	80357261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80357300_80359000
ES.5745.1	chr11	-	214	1	Intergenic	novelGene_4576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGAGGGTCCTTTATT	NA	False	NA	NA	False	AATGAA	-9	NA	80362126	80361912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80361900_80362100
ES.5746.1	chr11	+	159	1	Intergenic	novelGene_4577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATCTTTTAA	3287	False	NA	NA	False	NA	NA	NA	80460255	80460414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80460300_80460400
ES.5747.1	chr11	+	160	1	Intergenic	novelGene_4578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATATAAATAAATAA	6194	False	NA	NA	False	NA	NA	NA	80487154	80487314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80487200_80487300
ES.5748.1	chr11	-	5367	22	FSM	ENSMUSG00000035441.15	ENSMUST00000041065.14	5354	22	-13	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_3	2.91683672973592	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGGTGTTCTGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	80670864	80372951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_80375209_80448259_80448415_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
ES.5748.3	chr11	-	213	1	Intergenic	novelGene_4579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCAAGCAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	80515176	80514963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80515000_80515200
ES.5748.4	chr11	-	5676	1	Intergenic	novelGene_4580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTATCCAGGTTC	NA	False	NA	NA	False	NA	NA	NA	80662577	80656901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_80656900_80662600
ES.5749.1	chr11	+	1440	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	191	2	191	-2	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTAGTTACCGAGTC	NA	False	NA	3	True	AGTAAA	-21	NA	80701191	80712857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ES.5749.2	chr11	+	1682	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	192	-241	192	241	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTTGGTTTCTGTTTTT	NA	False	NA	12	True	AATACA	-23	NA	80701192	80713100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ES.575.1	chr1	+	267	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGAAAAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	59942582	59942849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_59942600_59942800
ES.5750.1	chr11	+	179	1	Intergenic	novelGene_4581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGGGCATCC	NA	False	NA	NA	False	NA	NA	NA	80713203	80713382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_80713200_80713400
ES.5751.1	chr11	-	209	1	Intergenic	novelGene_4582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTATTCCGACTCTGAA	NA	False	NA	NA	False	NA	NA	NA	82591648	82591439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82591400_82591600
ES.5752.1	chr11	+	170	1	Intergenic	novelGene_4583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGATGTCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	82614807	82614977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82614800_82615000
ES.5753.1	chr11	+	176	1	Intergenic	novelGene_4584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTCCTGGTT	NA	False	NA	NA	False	NA	NA	NA	82631085	82631261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82631100_82631300
ES.5754.1	chr11	+	175	1	Intergenic	novelGene_4585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAACAACACTGTTG	NA	False	NA	NA	False	NA	NA	NA	82645197	82645372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82645200_82645400
ES.5755.1	chr11	-	4030	13	NNC	ENSMUSG00000020698.12	novel	1787	14	NA	NA	46	2502	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.63910092681634	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTTTCACATTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	82655086	82607573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632888_82632947_82644459_82644564_82645787_82645962_82651175_82651311_82653013_82653078_82654916
ES.5755.2	chr11	-	697	5	ISM	ENSMUSG00000020698.12	ENSMUST00000021040.10	1787	14	31	34349	31	-34349	5prime_fragment	FALSE	canonical	2	8	junction_4	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGTGTGCACGTGAC	NA	False	NA	NA	False	ATTAAA	-9	NA	82655101	82644424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_82644564_82645787_82645962_82651175_82651311_82653013_82653078_82654916
ES.5756.1	chr11	+	1609	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	-19	1	-19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATGGGTATTCTTTTT	NA	False	NA	NA	False	CATAAA	-20	NA	82655151	82656760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82655200_82656800
ES.5756.2	chr11	+	1361	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	-4	234	-4	-234	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTTCAATGTGGTTTTT	NA	False	NA	64	True	NA	NA	NA	82655166	82656527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82655200_82656500
ES.5756.3	chr11	+	1485	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	2	104	2	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCGATGTATATATATT	NA	False	NA	NA	False	GATAAA	-19	NA	82655172	82656657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82655200_82656700
ES.5756.4	chr11	+	2525	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	7	-941	7	941	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAAGAAGTCTGTGAC	NA	False	NA	68	True	AATAAA	-21	NA	82655177	82657702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82655200_82657700
ES.5756.5	chr11	+	1631	2	Genic_Genomic	ENSMUSG00000046010.8	novel	1591	1	NA	NA	7	855	multi-exon	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	82655177	82657616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_82656269_82657076
ES.5756.6	chr11	+	3523	3	Genic_Genomic	ENSMUSG00000046010.8	novel	1591	1	NA	NA	13	2324	multi-exon	TRUE	non_canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAGTAGCCATTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	82655183	82659085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_82658413_82658570_82658746_82658966
ES.5757.1	chr11	-	4908	2	NNC	ENSMUSG00000085175.8	novel	655	2	NA	NA	-7	4133	intron_retention	FALSE	canonical	1	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCGGTACATGTAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	82671875	82666293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82671125_82671798
ES.5757.2	chr11	-	707	3	FSM	ENSMUSG00000085175.8	ENSMUST00000152784.8	686	3	-25	4	-25	-4	multi-exon	FALSE	canonical	2	4	junction_1	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGTTCATTATGTC	NA	False	NA	0	True	AATAAA	-18	NA	82671893	82670430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82670762_82670960_82671125_82671681
ES.5757.3	chr11	-	903	2	FSM	ENSMUSG00000085175.8	ENSMUST00000136051.2	655	2	-22	-226	-22	-4	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGTTCATTATGTC	NA	False	NA	0	True	AATAAA	-18	NA	82671890	82670430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82671125_82671681
ES.5758.1	chr11	+	6039	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	-2	-1477	-2	65	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCATGGGTTCTGGTT	NA	False	NA	76	True	TTTAAA	-18	NA	82671931	82695165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.10	chr11	+	3921	19	NIC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	14	-10	intron_retention	FALSE	canonical	3	118	junction_3	18.837921433922	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAATGCTTCTTGTATGT	NA	False	NA	10	True	TTTAAA	-6	NA	82671981	82692841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.11	chr11	+	5777	19	NIC	ENSMUSG00000020697.17	novel	3636	20	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_2	43.964913058562	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671981	82695100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.12	chr11	+	3680	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	48	832	14	4	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGCAAGACCTTTATT	NA	False	NA	25	True	TTTAAA	-21	NA	82671981	82692856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.13	chr11	+	6120	19	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	15	-1	intron_retention	FALSE	canonical	0	0	junction_5	45.7432447957558	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82671982	82695099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680430_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.14	chr11	+	3346	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-45	2496	16	-323	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGCTTTGTCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	82671983	82692528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.15	chr11	+	6755	18	NIC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	17	0	intron_retention	FALSE	canonical	3	118	junction_3	19.3113266152312	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671984	82695100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.16	chr11	+	3679	20	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	17	69	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	43.7847289939631	286	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGAGTTTCCAGGTCA	NA	False	NA	90	True	NA	NA	NA	82671984	82692921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684769_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.20	chr11	+	5829	20	NNC	ENSMUSG00000020697.17	novel	3631	20	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_1	63.3864286356319	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671985	82695100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680456_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.21	chr11	+	6547	19	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	18	0	intron_retention	FALSE	canonical	0	0	junction_11	45.7432447957558	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671985	82695100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686538_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.23	chr11	+	4095	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	52	413	18	-413	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCAAGTTACCAGTGA	NA	False	NA	NA	False	CATAAA	-21	NA	82671985	82693275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.24	chr11	+	4612	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	-42	1227	19	109	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCAAGCAGAAGCTGCT	NA	False	NA	NA	False	AGTAAA	-13	NA	82671986	82693797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.3	chr11	+	5875	20	NNC	ENSMUSG00000020697.17	novel	5797	20	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_1	58.1390062206203	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTTTCCCCCCC	NA	False	NA	9	True	AATAAA	-14	NA	82671961	82695098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684769_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.30	chr11	+	4478	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	-7	-835	1	-1	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTTGTCTGGCTCTAT	NA	False	NA	NA	False	NA	NA	NA	82672011	82693687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.32	chr11	+	3047	20	NIC	ENSMUSG00000020697.17	novel	3631	20	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	62.9095996532473	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGTGTGTCTGTCTCT	NA	False	NA	NA	False	ATTAAA	-33	NA	82672011	82691478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82691324
ES.5758.34	chr11	+	3479	19	NIC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	0	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	43.964913058562	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAATGCTTCTTGTATGT	NA	False	NA	10	True	TTTAAA	-6	NA	82672023	82692841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.36	chr11	+	4687	19	NIC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	1	-413	intron_retention	FALSE	canonical	3	118	junction_3	18.9032625050104	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCAAGTTACCAGTGA	NA	False	NA	NA	False	CATAAA	-21	NA	82672024	82693275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.38	chr11	+	5802	20	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_2	44.7380804782162	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTGGTTTTTTTCCCC	NA	False	NA	6	True	AATAAA	-11	NA	82672026	82695095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672103_82674171_82674654_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.41	chr11	+	5461	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	1	335	1	-335	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAATACACATTTGG	NA	False	NA	NA	False	TATAAA	-14	NA	82672029	82694689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.45	chr11	+	6072	14	NIC	ENSMUSG00000020697.17	novel	3636	20	NA	NA	7	-578	intron_retention	FALSE	canonical	3	52	junction_3	36.544210074112	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTGGTCTCCTCAGAGT	NA	False	NA	NA	False	NA	NA	NA	82672035	82692273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.46	chr11	+	3497	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	110	953	15	-116	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCACCTGCAGTTTTCCTC	NA	False	NA	-96	True	TTTAAA	-28	NA	82672043	82692735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.47	chr11	+	5854	20	NNC	ENSMUSG00000020697.17	novel	5797	20	NA	NA	27	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	59.0728926682912	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82672055	82695099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672099_82674171_82674726_82676131_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.48	chr11	+	3568	20	NNC	ENSMUSG00000020697.17	novel	3631	20	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.3650232252314	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTATGTGGCAAGACC	NA	False	NA	19	True	TTTAAA	-15	NA	82672066	82692850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686623_82686877_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.49	chr11	+	6060	20	NNC	ENSMUSG00000020697.17	novel	720	6	NA	NA	182	-1	intron_retention	FALSE	canonical	0	0	junction_1	44.7105805272123	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82672210	82695099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672469_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.50	chr11	+	6175	20	NNC	ENSMUSG00000020697.17	novel	720	6	NA	NA	201	-2	intron_retention	FALSE	canonical	1	1	junction_1	44.5073370029191	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTTTCCCCCCC	NA	False	NA	9	True	AATAAA	-14	NA	82672229	82695098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672604_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.51	chr11	+	4337	20	NNC	ENSMUSG00000020697.17	novel	720	6	NA	NA	216	-413	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.5073370029191	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCAAGTTACCAGTGA	NA	False	NA	NA	False	CATAAA	-21	NA	82672244	82693275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672604_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.52	chr11	+	5968	20	NNC	ENSMUSG00000020697.17	novel	720	6	NA	NA	226	-7	intron_retention	FALSE	canonical	0	0	junction_1	63.3864286356319	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTTGGTTTTTTTCC	NA	False	NA	4	True	AATAAA	-9	NA	82672254	82695093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672469_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680411_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.53	chr11	+	3552	19	ISM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	2234	843	2139	-6	3prime_fragment	FALSE	canonical	3	118	junction_2	18.9824480332051	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCTTGTATGTGGCA	NA	False	NA	14	True	TTTAAA	-10	NA	82674167	82692845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.54	chr11	+	3973	19	ISM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	2234	422	2139	414	3prime_fragment	FALSE	canonical	3	118	junction_2	18.9824480332051	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAATGGTCTCAAGT	NA	False	NA	NA	False	CATAAA	-12	NA	82674167	82693266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.55	chr11	+	5805	19	ISM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	2140	-75	2140	-1	3prime_fragment	FALSE	canonical	3	118	junction_2	18.9824480332051	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTTCCCCCCCA	NA	False	NA	10	True	AATAAA	-15	NA	82674168	82695099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.56	chr11	+	3602	19	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	2449	416	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	44.9323222218362	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAATGGTCTCAAGTTA	NA	False	NA	NA	False	CATAAA	-14	NA	82674477	82693268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684769_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.59	chr11	+	4337	12	ISM	ENSMUSG00000020697.17	ENSMUST00000021039.12	5957	20	10901	2	-3649	-2	3prime_fragment	FALSE	canonical	3	170	junction_11	10.0404142023809	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTTTTCCCCCCC	NA	False	NA	9	True	AATAAA	-14	NA	82682861	82695098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.60	chr11	+	4370	6	ISM	ENSMUSG00000020697.17	ENSMUST00000021039.12	5957	20	15481	0	-602	0	3prime_fragment	FALSE	canonical	3	170	junction_5	6.05309838016862	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82687441	82695100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.7	chr11	+	4008	20	NNC	ENSMUSG00000020697.17	novel	3631	20	NA	NA	11	-416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.3864286356319	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTCTCAAGTTACCAG	NA	False	NA	NA	False	CATAAA	-18	NA	82671978	82693272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680456_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5758.9	chr11	+	10720	17	NNC	ENSMUSG00000020697.17	novel	4560	20	NA	NA	13	3145	intron_retention	FALSE	canonical	0	0	junction_7	46.9454470635865	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCGTTTACATTTGTT	NA	False	NA	NA	False	AGTAAA	-19	NA	82671980	82698245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680725_82681303_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ES.5759.1	chr11	+	162	2	Antisense	novelGene_ENSMUSG00000020696.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	82707791	82750994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_82707891_82750931
ES.5759.2	chr11	+	222	1	Intergenic	novelGene_4587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	82707795	82708017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82707800_82708000
ES.5759.3	chr11	+	134	1	Intergenic	novelGene_4588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCGTCTGTTCGTG	NA	False	NA	NA	False	NA	NA	NA	82718592	82718726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82718600_82718700
ES.576.1	chr1	+	5595	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-57	-6	-57	6	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGTGTTTTTA	NA	False	NA	28	True	AATAAA	-21	NA	59952107	60024511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.10	chr1	+	5256	9	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	-13	1	intron_retention	FALSE	non_canonical	0	0	junction_1	38.6943148278917	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCTTTCTCTGTGTGT	NA	False	NA	23	True	AATAAA	-16	NA	59952151	60024506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952467_59952756_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.11	chr1	+	5116	9	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	38.6943148278917	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTTCTTTCTCTGTGT	NA	False	NA	21	True	AATAAA	-14	NA	59952161	60024504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952181_59952598_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.12	chr1	+	5386	7	NIC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	42.3031388380999	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTCTTTCTCTGTG	NA	False	NA	20	True	AATAAA	-13	NA	59952164	60024503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60009644_60009871_60014041_60014163_60020567
ES.576.13	chr1	+	2347	8	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	3	657	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	40.2613908333621	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATCCTTTGGTGGCCTC	NA	False	NA	1	True	NA	NA	NA	59952167	60021331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997587_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.14	chr1	+	4814	9	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_8	38.6943148278917	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCTTTCTCTGTGTGT	NA	False	NA	23	True	AATAAA	-16	NA	59952167	60024506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567_60020659_60021374
ES.576.15	chr1	+	5410	7	NIC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	3	2	intron_retention	FALSE	canonical	1	1	junction_6	43.8915962596739	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTCTCTGTGTGTT	NA	False	NA	24	True	AATAAA	-17	NA	59952167	60024507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60020567
ES.576.16	chr1	+	4551	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	76	905	76	-905	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCATGTATTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	59952240	60023600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.17	chr1	+	2281	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	77	3174	77	657	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGATCCTTTGGTGGCCTC	NA	False	NA	1	True	NA	NA	NA	59952241	60021331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.18	chr1	+	5042	8	NNC	ENSMUSG00000041040.13	novel	418	4	NA	NA	871	0	intron_retention	FALSE	canonical	0	0	junction_1	41.3417810107748	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTCTTTCTCTGTGTG	NA	False	NA	22	True	AATAAA	-15	NA	59953035	60024505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59953293_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.2	chr1	+	2616	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-55	2971	-55	860	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGATTTATGTTTTTTT	NA	False	NA	NA	False	TATAAA	-26	NA	59952109	60021534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.4	chr1	+	5494	9	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	-35	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	38.6943148278917	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTCTTTCTCTGTG	NA	False	NA	20	True	AATAAA	-13	NA	59952129	60024503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952539_59952609_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.5	chr1	+	4232	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-26	1326	-26	-1326	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAACATTCCTGAGATC	NA	False	NA	NA	False	AATAAA	-14	NA	59952138	60023179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.6	chr1	+	5251	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	-23	304	-23	-304	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTAAGGTTTCTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	59952141	60024201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.7	chr1	+	5485	9	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	-23	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	38.6943148278917	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTCTTTCTCTGTG	NA	False	NA	20	True	AATAAA	-13	NA	59952141	60024503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952289_59952356_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ES.576.9	chr1	+	3253	8	NNC	ENSMUSG00000041040.13	novel	5532	8	NA	NA	-13	1516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.3259813518551	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCATCAGTGTTGGTA	NA	False	NA	NA	False	AATAAA	-25	NA	59952151	60022190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014018_60014163_60020567
ES.5760.1	chr11	+	4377	1	Intergenic	novelGene_4592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82753800	82758177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82753800_82758200
ES.5761.1	chr11	-	201	1	Intergenic	novelGene_4586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGAGGGAAGCCGTTA	NA	False	NA	NA	False	NA	NA	NA	82687657	82687456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82687500_82687700
ES.5762.1	chr11	-	3617	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-24	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.2869458013678	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCCATCTGGTGTGT	2719	False	NA	NA	False	AATAAA	-15	NA	82762060	82694643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82755078_82755179_82761833
ES.5762.10	chr11	-	4660	5	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	-18	2	intron_retention	FALSE	canonical	1	3	junction_1	64.7432428906677	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	3191	False	NA	NA	False	AATAAA	-13	NA	82761588	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82700833_82701045_82701853_82703637_82709241_82709430_82761480
ES.5762.12	chr11	-	3305	6	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_5	64.9695313204582	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	3198	False	NA	NA	False	AATAAA	-13	NA	82761581	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761480
ES.5762.13	chr11	-	3586	7	NIC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-35	2	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	63.0204993104096	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2708	False	NA	NA	False	AATAAA	-13	NA	82762071	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82736577_82736722_82761833
ES.5762.14	chr11	-	3355	5	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	28	2	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	56.2866547238331	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2771	False	NA	NA	False	AATAAA	-13	NA	82762008	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82700833_82701045_82703225_82703637_82709241_82709430_82761833
ES.5762.15	chr11	-	3398	6	NNC	ENSMUSG00000020696.19	novel	1719	6	NA	NA	953	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.6171149180149	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	82718904	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82718710
ES.5762.16	chr11	-	3507	6	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-26	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8425019053941	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2717	False	NA	NA	False	AATAAA	-12	NA	82762062	82694646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.17	chr11	-	3406	6	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	69	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8425019053941	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2812	False	NA	NA	False	AATAAA	-12	NA	82761967	82694646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82700824_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.18	chr11	-	3180	6	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	61.2751172989493	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	3218	False	NA	NA	False	AATAAA	-12	NA	82761561	82694646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82761480
ES.5762.19	chr11	-	3472	7	NNC	ENSMUSG00000020696.19	novel	4973	7	NA	NA	962	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	60.0483601404364	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	82718895	82694646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82718710
ES.5762.2	chr11	-	3433	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-24	4	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCCATCTGGTGTGT	2719	False	NA	NA	False	AATAAA	-15	NA	82762060	82694643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
ES.5762.20	chr11	-	3537	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	34	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	64.8930045599395	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	2777	False	NA	NA	False	AATAAA	-12	NA	82762002	82694646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82755078_82755160_82761833
ES.5762.22	chr11	-	3749	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	62.4748112507459	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2756	False	NA	NA	False	AATAAA	-11	NA	82762023	82694647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736851_82761833
ES.5762.23	chr11	-	3697	9	NNC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.9882802689136	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2799	False	NA	NA	False	AATAAA	-11	NA	82761980	82694647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82724906_82725106_82726664_82726730_82761833
ES.5762.24	chr11	-	3207	5	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	68.1560708961425	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2753	False	NA	NA	False	AATAAA	-11	NA	82762026	82694647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82761833
ES.5762.25	chr11	-	3431	6	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.8425019053941	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2788	False	NA	NA	False	AATAAA	-11	NA	82761991	82694647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697027_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.26	chr11	-	3650	8	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	36	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_6	65.6906789896592	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGCCTGTCCCATCTG	2779	False	NA	NA	False	AATAAA	-9	NA	82762000	82694649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82724906_82725106_82761833
ES.5762.3	chr11	-	3656	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	-20	-3	-20	3	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2723	False	NA	NA	False	AATAAA	-14	NA	82762056	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
ES.5762.30	chr11	-	3358	7	NNC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.1941825911202	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGATGCCTGTCCCA	3218	False	NA	NA	False	AATAAA	-5	NA	82761561	82694653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82755078_82755160_82761480
ES.5762.31	chr11	-	5539	5	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	41	-6	intron_retention	FALSE	canonical	3	102	junction_4	26.1820549231721	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGATGCCTGTCCCA	2784	False	NA	NA	False	AATAAA	-5	NA	82761995	82694653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82703637_82709241_82709430_82761833
ES.5762.32	chr11	-	3528	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.7664564226809	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGATGCCTGTCCCA	3191	False	NA	NA	False	AATAAA	-5	NA	82761588	82694653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697012_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761480
ES.5762.33	chr11	-	1937	7	NIC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	42	319	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	62.2666755888645	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCGGCTTTGTCTTT	2785	False	NA	NA	False	NA	NA	NA	82761994	82696113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82736577_82736722_82761833
ES.5762.34	chr11	-	1692	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	-38	34	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAAAACCCATTTC	2705	False	NA	26	True	NA	NA	NA	82762074	82696398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
ES.5762.35	chr11	-	1749	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	-15	1755	-15	30	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATTTGCCTAAAACCCA	2728	False	NA	22	True	NA	NA	NA	82762051	82696402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.36	chr11	-	1699	7	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	70.7234441720393	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGTGTTAATGTA	2743	False	NA	-10	True	TTTAAA	-16	NA	82762036	82696434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82755078_82755160_82761833
ES.5762.37	chr11	-	1802	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	42	1789	42	-4	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTCTGTGTGTTAATG	2785	False	NA	-12	True	TTTAAA	-14	NA	82761994	82696436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
ES.5762.38	chr11	-	1981	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	62.4748112507459	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTCTGTGTGTTAATG	2735	False	NA	-12	True	TTTAAA	-14	NA	82762044	82696436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736851_82761833
ES.5762.39	chr11	-	1518	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	48	1923	48	-138	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTCTCTCCTGTCCTA	2791	False	NA	NA	False	AATGAA	-20	NA	82761988	82696570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.4	chr11	-	3469	7	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	20	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	70.7234441720393	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2763	False	NA	NA	False	AATAAA	-14	NA	82762016	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82755078_82755160_82761833
ES.5762.40	chr11	-	1793	9	NNC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	51	-140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.9927532426414	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCAGTCTCTCCTGTCC	2794	False	NA	NA	False	AATGAA	-18	NA	82761985	82696572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82724906_82725106_82755078_82755160_82761833
ES.5762.41	chr11	-	1461	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	13	-146	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGGACCAGTCTCTC	2756	False	NA	NA	False	AATGAA	-12	NA	82762023	82696578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
ES.5762.42	chr11	-	1353	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	35	2101	35	-316	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGAGCAACTGGCAGT	2778	False	NA	NA	False	AATACA	-12	NA	82762001	82696748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.43	chr11	-	3479	5	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	19	-2	intron_retention	FALSE	canonical	3	91	junction_2	33.380383460949	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTGTGCATTCAAGTG	2762	False	NA	NA	False	AATAAA	-15	NA	82762017	82698249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82699363_82700833_82701045_82701853_82703637_82709241_82709430_82761833
ES.5762.44	chr11	-	223	1	Intergenic	novelGene_4589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCACCTTTCCCAGG	NA	False	NA	NA	False	AATACA	-23	NA	82723362	82723139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82723100_82723400
ES.5762.45	chr11	-	178	1	Intergenic	novelGene_4590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	82725626	82725448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82725400_82725600
ES.5762.46	chr11	-	218	1	Intergenic	novelGene_4591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGATACACATTTAAGG	NA	False	NA	NA	False	NA	NA	NA	82737615	82737397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82737400_82737600
ES.5762.47	chr11	-	180	1	Intergenic	novelGene_4593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAGATCAGG	9253	False	NA	NA	False	NA	NA	NA	82755526	82755346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82755300_82755500
ES.5762.5	chr11	-	3369	7	NIC	ENSMUSG00000020696.19	novel	3575	8	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	58.54343117151	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	3219	False	NA	NA	False	AATAAA	-14	NA	82761560	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761480
ES.5762.6	chr11	-	3519	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	-27	-3	-27	3	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2716	False	NA	NA	False	AATAAA	-14	NA	82762063	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ES.5762.7	chr11	-	3306	6	NNC	ENSMUSG00000020696.19	novel	4973	7	NA	NA	10650	3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	59.0267735862295	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	6241	False	NA	NA	False	AATAAA	-14	NA	82709207	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709002
ES.5762.8	chr11	-	3640	7	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	41	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	68.1731863222875	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCCCATCTGGTGTG	2784	False	NA	NA	False	AATAAA	-14	NA	82761995	82694644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82736577_82736851_82761833
ES.5762.9	chr11	-	3502	8	NNC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	62.7505589860459	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTCCCATCTGGTGT	2744	False	NA	NA	False	AATAAA	-13	NA	82762035	82694645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709298_82736577_82736722_82761833
ES.5763.1	chr11	-	2663	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-19	782	-19	-782	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACCTTTACAGGTGATA	NA	False	NA	NA	False	AATAAA	-25	NA	82781459	82768306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ES.5763.2	chr11	-	3877	10	NNC	ENSMUSG00000018841.18	novel	3426	10	NA	NA	560	941	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	50.8024496347262	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTGTTTATGGACCA	205	False	NA	78	True	AATAAA	-17	NA	82780855	82768621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82769850_82770010_82771161_82771533_82772231_82772278_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795
ES.5763.3	chr11	-	2352	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-24	1098	-24	940	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGTTGTTTATGGACC	NA	False	NA	77	True	AATAAA	-16	NA	82781464	82768622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ES.5763.5	chr11	-	2418	10	NNC	ENSMUSG00000018841.18	novel	3426	10	NA	NA	-6	848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.4739770959573	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACACTGTGGCCATCCA	NA	False	NA	-15	True	AATAAA	-18	NA	82781421	82768714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82780962
ES.5763.6	chr11	-	1731	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	3	1692	3	346	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGAGCCCTAGAGCCAC	NA	False	NA	NA	False	AATATA	-16	NA	82781437	82769216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ES.5763.7	chr11	-	1588	10	NNC	ENSMUSG00000018841.18	novel	3426	10	NA	NA	-24	107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	38.4739770959573	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTGTCCTGGTCCTGTG	NA	False	NA	0	True	AAGAAA	-19	NA	82781464	82769455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780927_82781163
ES.5763.8	chr11	-	1527	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	-35	1934	-35	104	multi-exon	FALSE	canonical	3	107	junction_4	12.9099444873581	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATAGTGTCCTGGTCCT	NA	False	NA	-3	True	AAGAAA	-16	NA	82781475	82769458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ES.5764.1	chr11	-	211	1	Intergenic	novelGene_4594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	82787065	82786854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82786900_82787100
ES.5765.1	chr11	-	1758	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	29	-4	29	4	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTCTTGTTCTAGAAC	8332	False	NA	-2	True	AATAAA	-26	NA	82799208	82791589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.10	chr11	-	1530	11	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	59	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	95.9160570499017	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCAGCTTCTTGTTC	9086	False	NA	-8	True	AATAAA	-20	NA	82798454	82791595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794958_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797444_82798378
ES.5765.11	chr11	-	2950	11	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	-2	intron_retention	FALSE	canonical	2	5	junction_3	79.5741163947172	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCAGCTTCTTGTTC	8336	False	NA	-8	True	AATAAA	-20	NA	82799204	82791595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82794024_82794915_82794958_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.12	chr11	-	3908	8	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	57	1	intron_retention	FALSE	canonical	3	193	junction_2	39.3332180328069	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGCAGCTTCTTGTT	8429	False	NA	-9	True	AATAAA	-19	NA	82799111	82791596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82792454_82792534_82794024_82794915_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917
ES.5765.14	chr11	-	2318	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-21	0	intron_retention	FALSE	canonical	3	193	junction_2	37.0264770130781	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8351	False	NA	-10	True	AATAAA	-18	NA	82799189	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.15	chr11	-	1752	13	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	74.8045601699671	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8336	False	NA	-10	True	AATAAA	-18	NA	82799204	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799158
ES.5765.16	chr11	-	3322	10	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	35	junction_2	75.8844150299944	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8319	False	NA	-10	True	AATAAA	-18	NA	82799221	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82793960_82794915_82794963_82795065_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.17	chr11	-	1767	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	29	0	intron_retention	FALSE	canonical	3	35	junction_3	68.7710298414568	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8332	False	NA	-10	True	AATAAA	-18	NA	82799208	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.18	chr11	-	2904	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	18	0	intron_retention	FALSE	canonical	3	35	junction_2	72.0658726444078	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8321	False	NA	-10	True	AATAAA	-18	NA	82799219	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.19	chr11	-	1750	12	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	0	intron_retention	FALSE	non_canonical	0	0	junction_2	111.710073385831	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8348	False	NA	-10	True	AATAAA	-18	NA	82799192	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82792702_82793820_82793957_82794915_82794958_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.2	chr11	-	2166	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	0	intron_retention	FALSE	canonical	3	193	junction_4	35.2483514648804	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8336	False	NA	-6	True	AATAAA	-22	NA	82799204	82791593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.21	chr11	-	3456	10	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	31	0	intron_retention	FALSE	canonical	2	5	junction_2	83.6010514435622	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8334	False	NA	-10	True	AATAAA	-18	NA	82799206	82791597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82794024_82794915_82794958_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.23	chr11	-	5496	6	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	35	junction_1	94.8754973636502	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATGTTGCAGCTTCTTG	8357	False	NA	-11	True	AATAAA	-17	NA	82799183	82791598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82793960_82794915_82795202_82795617_82795811_82796103_82798597_82798917_82799062_82799164
ES.5765.24	chr11	-	3459	3	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-781	-2	intron_retention	FALSE	canonical	3	193	junction_1	38	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8182	False	NA	-12	True	AATAAA	-16	NA	82796243	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82794024_82794915_82795811_82796103
ES.5765.25	chr11	-	2365	10	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	35	junction_2	75.7657207742687	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8341	False	NA	-12	True	AATAAA	-16	NA	82799199	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917
ES.5765.27	chr11	-	2260	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-29	-2	intron_retention	FALSE	canonical	3	35	junction_2	72.0513705629532	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8343	False	NA	-12	True	AATAAA	-16	NA	82799197	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.28	chr11	-	4659	8	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	35	junction_2	85.0325267897226	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8349	False	NA	-12	True	AATAAA	-16	NA	82799191	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82792454_82792534_82793960_82794915_82795811_82796103_82796202_82796332_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.29	chr11	-	1703	13	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	71.3949792041118	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8342	False	NA	-12	True	AATAAA	-16	NA	82799198	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798586_82798941_82799062_82799164
ES.5765.3	chr11	-	1601	12	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	97.7892826523075	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8346	False	NA	-7	True	AATAAA	-21	NA	82799194	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792534_82792695_82793820_82793957_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.30	chr11	-	4348	9	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-33	-2	intron_retention	FALSE	canonical	3	35	junction_2	79.0774936375705	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTGCAGCTTCTT	8339	False	NA	-12	True	AATAAA	-16	NA	82799201	82791599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82793960_82794915_82794963_82795065_82795811_82796103_82796202_82796332_82796410_82797250_82798597_82798917_82799062_82799164
ES.5765.31	chr11	-	1669	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-33	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	77.9636490841238	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCATGTTGCAGCTTCT	8339	False	NA	-13	True	AATAAA	-15	NA	82799201	82791600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.33	chr11	-	2026	12	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-25	-4	intron_retention	FALSE	canonical	0	0	junction_2	78.3724947534803	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCATGTTGCAGCTTC	8347	False	NA	-14	True	AATAAA	-14	NA	82799193	82791601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82791877_82792382_82792909_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.34	chr11	-	4297	8	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	-4	intron_retention	FALSE	canonical	3	193	junction_2	40.7285689231848	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCATGTTGCAGCTTC	8348	False	NA	-14	True	AATAAA	-14	NA	82799192	82791601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82794024_82794915_82795811_82796103_82796202_82796332_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.36	chr11	-	3817	8	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	106	3	intron_retention	FALSE	canonical	3	35	junction_2	84.2469644581225	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTCATGTTGCAGCTT	8478	False	NA	-15	True	AATAAA	-13	NA	82799062	82791602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82797331_82798378_82798597_82798917
ES.5765.37	chr11	-	1835	12	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	17	0	intron_retention	FALSE	canonical	3	193	junction_3	35.3303184950076	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTTCATGTTGCAG	8320	False	NA	-18	True	AATAAA	-10	NA	82799220	82791605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.38	chr11	-	1213	3	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	33	5974	33	-1820	5prime_fragment	FALSE	canonical	3	212	junction_2	51	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACATACAAAGTGGA	8336	False	NA	NA	False	NA	NA	NA	82799204	82797567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_82798597_82798917_82799062_82799164
ES.5765.4	chr11	-	3231	11	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	29	-1	intron_retention	FALSE	canonical	3	35	junction_3	72.9348339272806	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8332	False	NA	-7	True	AATAAA	-21	NA	82799208	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82792454_82792534_82793960_82794915_82794963_82795065_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.5	chr11	-	3797	9	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-24	-1	intron_retention	FALSE	canonical	2	5	junction_2	107.264786276765	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8348	False	NA	-7	True	AATAAA	-21	NA	82799192	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82793960_82794915_82794958_82795065_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.6	chr11	-	4337	1	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-469	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8494	False	NA	-7	True	AATAAA	-21	NA	82795931	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791600_82795900
ES.5765.7	chr11	-	1685	13	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	33	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	66.8112494686004	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8336	False	NA	-7	True	AATAAA	-21	NA	82799204	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.8	chr11	-	2177	12	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-25	-1	intron_retention	FALSE	canonical	3	16	junction_3	74.6427303230706	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8347	False	NA	-7	True	AATAAA	-21	NA	82799193	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82792454_82792534_82792695_82793820_82793957_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5765.9	chr11	-	3385	10	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	35	junction_1	75.8967785064315	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	8349	False	NA	-7	True	AATAAA	-21	NA	82799191	82791594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ES.5766.1	chr11	+	172	1	Intergenic	novelGene_4595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAGGAACTG	NA	False	NA	NA	False	NA	NA	NA	82814741	82814913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82814700_82814900
ES.5767.1	chr11	+	180	1	Intergenic	novelGene_4596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	82815503	82815683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_82815500_82815700
ES.5768.1	chr11	-	7189	4	NNC	ENSMUSG00000069793.13	novel	5769	5	NA	NA	3742	5533	intron_retention	FALSE	non_canonical	0	0	junction_1	20.6074420214316	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTAATTTTACTCCCT	NA	False	NA	NA	False	NA	NA	NA	82878221	82863682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82863715_82869218_82872813_82872979_82873704_82875382
ES.5768.10	chr11	-	8401	3	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	13	-22	intron_retention	FALSE	canonical	3	11	junction_2	17.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAACA	8633	False	NA	-28	True	NA	NA	NA	82881950	82869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82873704_82875382_82879135_82881767
ES.5768.11	chr11	-	424	2	NNC	ENSMUSG00000069793.13	novel	5769	5	NA	NA	-7538	-22	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAACA	389	False	NA	-28	True	NA	NA	NA	82890194	82869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82869574_82890106
ES.5768.12	chr11	-	4675	4	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	-45	-22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.6074420214316	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAACA	8575	False	NA	-28	True	NA	NA	NA	82882008	82869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82872813_82872979_82873704_82875382_82875518_82881767
ES.5768.13	chr11	-	6640	5	NNC	ENSMUSG00000069793.13	novel	5769	5	NA	NA	-8132	-22	intron_retention	FALSE	canonical	0	0	junction_3	22.2752665528384	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAACA	NA	False	NA	-28	True	NA	NA	NA	82890788	82869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82873704_82875382_82875518_82878064_82879135_82886817_82886929_82889930
ES.5768.15	chr11	-	2893	6	Fusion	ENSMUSG00000069793.13_ENSMUSG00000035208.17	novel	4011	6	NA	NA	-2	764	multi-exon	TRUE	non_canonical	0	0	junction_1	6.46838465151849	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCAACTCCTGAGGGG	NA	False	NA	NA	False	AATGAA	-18	NA	82910936	82872045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_82872278_82894181_82894716_82894882_82895607_82904190_82904326_82907478_82908549_82910738
ES.5768.2	chr11	-	6434	5	FSM	ENSMUSG00000069793.13	ENSMUST00000138797.2	2128	5	-28	-4278	-28	684	multi-exon	FALSE	canonical	3	11	junction_4	14.1133801762724	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGACTGGATAGTGTGGT	8592	False	NA	NA	False	AATAAA	-2	NA	82881991	82868531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82881767
ES.5768.3	chr11	-	6573	4	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	0	684	intron_retention	FALSE	canonical	3	11	junction_3	15.8394724940223	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGACTGGATAGTGTGGT	8620	False	NA	NA	False	AATAAA	-2	NA	82881963	82868531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82873704_82875382_82875518_82878064_82879135_82881767
ES.5768.4	chr11	-	6034	5	FSM	ENSMUSG00000069793.13	ENSMUST00000138797.2	2128	5	-26	-3880	-26	286	multi-exon	FALSE	canonical	3	11	junction_4	14.1133801762724	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAATCATTGCTTTGTCC	8594	False	NA	NA	False	TTTAAA	-20	NA	82881989	82868929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82881767
ES.5768.5	chr11	-	5935	4	NIC	ENSMUSG00000069793.13	novel	5769	5	NA	NA	-46	0	intron_retention	FALSE	canonical	3	11	junction_3	15.8394724940223	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	8574	False	NA	-6	True	NA	NA	NA	82882009	82869215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82873704_82875382_82875518_82878064_82879135_82881767
ES.5768.6	chr11	-	5805	5	FSM	ENSMUSG00000069793.13	ENSMUST00000138797.2	2128	5	-83	-3594	-83	0	multi-exon	FALSE	canonical	3	11	junction_4	14.1133801762724	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	8537	False	NA	-6	True	NA	NA	NA	82882046	82869215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82881767
ES.5768.7	chr11	-	8268	4	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	11	junction_3	15.4560308258262	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGAATTTGTCTTTAA	8620	False	NA	-7	True	NA	NA	NA	82881963	82869216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_82872813_82872979_82873704_82875382_82879135_82881767
ES.5768.8	chr11	-	5693	5	NNC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	18.417043736713	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGAATTTGTCTTTA	8579	False	NA	-8	True	NA	NA	NA	82882004	82869217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879067_82881767
ES.5768.9	chr11	-	6349	6	NNC	ENSMUSG00000069793.13	novel	3862	6	NA	NA	-8075	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	21.2884945451763	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAGAAAGAAAACA	NA	False	NA	-28	True	NA	NA	NA	82890731	82869237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879067_82886817_82886930_82889930
ES.5769.1	chr11	-	7936	5	NNC	ENSMUSG00000072621.14	novel	3621	5	NA	NA	-497	4873	intron_retention	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAACAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	82931365	82914082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82918248_82918855_82921340_82923009_82923145_82925944_82927009_82931277
ES.5769.2	chr11	-	3270	1	Intergenic	novelGene_4597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATTGCCTTGTCCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	82917846	82914576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_82914600_82917800
ES.5769.3	chr11	-	5604	3	NNC	ENSMUSG00000072621.14	novel	2673	4	NA	NA	414	4087	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAGAAAAATTTTTT	NA	False	NA	NA	False	TTTAAA	-7	NA	82926578	82914868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_82918248_82918855_82920447_82925944
ES.5769.4	chr11	-	230	1	FSM	ENSMUSG00000082419.4	ENSMUST00000119608.2	498	1	341	-73	341	73	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGGGCTGAAGGGATGG	NA	False	NA	NA	False	NA	NA	NA	82918482	82918252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_82918300_82918500
ES.577.1	chr1	-	174	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATCATACTTC	NA	False	NA	NA	False	NA	NA	NA	59964357	59964183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_59964200_59964400
ES.5770.1	chr11	-	6090	1	Genic_Genomic	ENSMUSG00000111713.2	novel	NA	NA	NA	NA	-5886	-5291	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	82967958	82961868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_82961900_82968000
ES.5771.1	chr11	-	173	1	Intergenic	novelGene_4598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAAACTAGCATTCA	3787	False	NA	NA	False	NA	NA	NA	83001373	83001200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83001200_83001400
ES.5772.1	chr11	-	173	1	Intergenic	novelGene_4599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACCAGCATTCACC	6425	False	NA	NA	False	NA	NA	NA	83034075	83033902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83033900_83034100
ES.5773.1	chr11	+	4219	4	NNC	ENSMUSG00000018986.11	novel	1966	4	NA	NA	-35	3118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCGTTTGTCCTGAG	3759	False	NA	3	True	NA	NA	NA	83082120	83109098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83082235_83103369_83104440_83105313_83107646_83108395
ES.5773.2	chr11	+	4963	3	FSM	ENSMUSG00000018986.11	ENSMUST00000019130.8	1816	3	-28	-3119	-28	3119	multi-exon	FALSE	canonical	1	4	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCGTTTGTCCTGAGT	3766	False	NA	4	True	NA	NA	NA	83082127	83109099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83082235_83103369_83104440_83105313
ES.5773.3	chr11	+	4538	3	FSM	ENSMUSG00000018986.11	ENSMUST00000019130.8	1816	3	-21	-2701	-21	2701	multi-exon	FALSE	canonical	1	4	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGTAACCTGTTGTG	3773	False	NA	NA	False	GATAAA	-39	NA	83082134	83108681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83082235_83103369_83104440_83105313
ES.5773.4	chr11	+	5124	4	FSM	ENSMUSG00000018986.11	ENSMUST00000214041.2	1966	4	-22	-3136	-19	3122	multi-exon	FALSE	canonical	2	3	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTTGTCCTGAGTGTG	3775	False	NA	7	True	NA	NA	NA	83082136	83109102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83082235_83084868_83085036_83103369_83104440_83105313
ES.5773.5	chr11	+	4341	4	NNC	ENSMUSG00000018986.11	novel	1966	4	NA	NA	10	3120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCGTTTGTCCTGAGTG	3807	False	NA	5	True	NA	NA	NA	83082168	83109100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83082235_83103369_83104440_83105313_83107819_83108400
ES.5774.1	chr11	+	2464	5	NIC	ENSMUSG00000083161.3	novel	1581	5	NA	NA	-10	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.13901457890434	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATTTAAACTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	83115269	83151774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83115458_83116359_83116512_83134643_83134823_83145102_83146143_83150869
ES.5775.1	chr11	-	286	1	Intergenic	novelGene_4600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	83158660	83158374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83158400_83158700
ES.5776.1	chr11	+	380	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	-20	-4	1	4	multi-exon	FALSE	canonical	3	49	junction_1	166	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTGGGTAAGATCTT	5849	False	NA	14	True	ATTAAA	-23	NA	83182525	83185462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83182660_83182799_83182924_83185340
ES.5776.2	chr11	+	405	4	NNC	ENSMUSG00000093483.2	novel	383	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.35702260395516	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCATGGTATTTGTTTG	5849	False	NA	3	True	ATTAAA	-12	NA	83182525	83185451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83182660_83182792_83182924_83184283_83184313_83185340
ES.5776.3	chr11	+	384	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	1	-2	1	1	multi-exon	FALSE	non_canonical	0	0	junction_1	190.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTGTTTGGGTAAGAT	5849	False	NA	11	True	ATTAAA	-20	NA	83182525	83185459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83182660_83182792_83182924_83185340
ES.5776.4	chr11	+	495	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	-27	3	-4	-2	multi-exon	FALSE	canonical	3	381	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGGTATTTGTTTGGG	5865	False	NA	5	True	ATTAAA	-14	NA	83182541	83185453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83182924_83185340
ES.5776.5	chr11	+	2776	2	FSM	ENSMUSG00000093483.2_ENSMUSG00000065715.3	ENSMUST00000177248.2	431	2	-8	-2337	0	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGTATTTGTTTGGGT	5869	False	NA	6	True	ATTAAA	-15	NA	83182545	83185454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83182660_83182792
ES.5776.6	chr11	+	318	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177533.2	308	3	-12	2	2	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	5.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATGGTATTTGTTTGGG	5879	False	NA	5	True	ATTAAA	-14	NA	83182555	83185453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83182660_83182792_83182894_83185340
ES.5777.1	chr11	+	3090	22	NNC	ENSMUSG00000035152.15	novel	5625	22	NA	NA	6	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.1466119171923	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAGAACTCTTAACTG	4462	False	NA	11	True	AATAAA	-28	NA	83189855	83293501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83189889_83193474_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.10	chr11	+	3605	15	NNC	ENSMUSG00000035152.15	novel	3596	21	NA	NA	1	12980	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	58.1399174406019	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTACATGTATGGTTT	2180	False	NA	NA	False	NA	NA	NA	83193529	83248386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83246927
ES.5777.12	chr11	+	3165	8	ISM	ENSMUSG00000035152.15	ENSMUST00000132178.3	3576	12	1	6169	1	5353	intron_retention	FALSE	canonical	3	189	junction_1	16.9489027999587	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAGAA	2180	False	NA	NA	False	NA	NA	NA	83193529	83229237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167
ES.5777.14	chr11	+	4369	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	234	1022	14	1001	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTACTCATGGCCCTGCTC	2193	False	NA	NA	False	NA	NA	NA	83193542	83294839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.15	chr11	+	3383	23	NIC	ENSMUSG00000035152.15	novel	5625	22	NA	NA	-14	-37	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	76.3321363602665	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCGACAAGTTAATTAAAGC	2196	False	NA	NA	False	NA	NA	NA	83193545	83293801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83193664_83195861_83195917_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.17	chr11	+	3530	21	NNC	ENSMUSG00000035152.15	novel	3596	21	NA	NA	10	-5975	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	64.3890324511869	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATGGTATACCTGTGT	2220	False	NA	NA	False	AATAAA	-42	NA	83193569	83283448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83282661
ES.5777.18	chr11	+	4295	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-25	-1001	15	1001	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTACTCATGGCCCTGCTC	2225	False	NA	NA	False	NA	NA	NA	83193574	83294839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.2	chr11	+	3837	22	NNC	ENSMUSG00000035152.15	novel	2742	21	NA	NA	7	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.4095122293117	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCGGTGCAAGCCAAGAA	4463	False	NA	1	True	AATAAA	-18	NA	83189856	83293491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83190794_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255667_83256476_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.20	chr11	+	2916	21	ISM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	5731	2355	-24	36	3prime_fragment	FALSE	canonical	3	76	junction_13	48.2419941544709	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTCTTAACTGGAAGA	3503	False	NA	16	True	AATAAA	-33	NA	83199039	83293506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.21	chr11	+	2688	18	ISM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	19163	353	13699	15	3prime_fragment	FALSE	canonical	3	171	junction_11	24.2796567130552	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTAATCGGTGCAAGC	NA	False	NA	-5	True	AATAAA	-12	NA	83212762	83293485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.22	chr11	+	4321	6	ISM	ENSMUSG00000035152.15	ENSMUST00000176523.2	2742	21	28543	48067	28543	9997	internal_fragment	FALSE	canonical	3	190	junction_2	16.265300489078	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1551	False	NA	NA	False	NA	NA	NA	83227606	83245403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804
ES.5777.23	chr11	+	5898	1	Intergenic	novelGene_4610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTATCTTTCAAGCTT	7061	False	NA	NA	False	NA	NA	NA	83247345	83253243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83247300_83253200
ES.5777.3	chr11	+	4147	21	NNC	ENSMUSG00000035152.15	novel	2742	21	NA	NA	11	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2201761339817	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACCTTATTGTTTTATA	4467	False	NA	NA	False	ATTAAA	-29	NA	83189860	83293847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83190794_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.4	chr11	+	5453	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	176	-4	-44	4	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGGTATGGACTTTGT	2135	False	NA	NA	False	AATAAA	-20	NA	83193484	83295865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.5	chr11	+	2937	9	ISM	ENSMUSG00000035152.15	ENSMUST00000132178.3	3576	12	-44	6139	-44	5383	5prime_fragment	FALSE	canonical	3	189	junction_1	19.46431028832	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGAAAAGCCC	2135	False	NA	NA	False	NA	NA	NA	83193484	83229267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591
ES.5777.6	chr11	+	5409	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-113	-2027	-42	4	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGGTATGGACTTTGT	2137	False	NA	NA	False	AATAAA	-20	NA	83193486	83295865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.7	chr11	+	3433	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	178	2014	-42	9	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACCTTATTGTTTTATA	2137	False	NA	NA	False	ATTAAA	-29	NA	83193486	83293847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.8	chr11	+	3095	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	187	2343	-33	48	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGACGTTGTACTGTT	2146	False	NA	28	True	AATAAA	-45	NA	83193495	83293518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5777.9	chr11	+	3378	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-96	-13	-25	13	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATTGTTTTATATTTT	2154	False	NA	NA	False	ATTAAA	-33	NA	83193503	83293851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ES.5778.1	chr11	-	4755	23	NNC	ENSMUSG00000018733.11	novel	2389	4	NA	NA	-101425	2709	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAAAAGTCCAAACCCG	7788	False	NA	NA	False	NA	NA	NA	83294837	83182758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83182926_83189537_83189879_83199039_83199101_83207247_83207350_83212762_83212899_83215334_83215582_83223810_83224003_83226205_83226427_83227165_83227287_83227589_83227686_83230136_83230250_83232094_83232265_83233425_83233523_83237471_83237732_83241802_83241995_83255617_83255663_83256472_83256619_83258707_83258852_83260475_83260603_83280521_83280612_83281518_83281605_83288576_83288734_83293393
ES.5778.10	chr11	-	9832	21	NNC	ENSMUSG00000018733.11	novel	2729	4	NA	NA	-101425	1214	intron_retention	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGAGAGGTTAGGGTC	7788	False	NA	NA	False	NA	NA	NA	83294837	83184253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83189879_83199039_83199100_83207244_83207350_83212762_83212899_83215334_83215582_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83241997_83256471_83256619_83258707_83258852_83260475_83260603_83280521_83280612_83281518_83281605_83288576_83288734_83293393
ES.5778.12	chr11	-	2386	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	5	-2	1	2	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTTCTTGAAGTTTTT	2431	False	NA	-5	True	AATAAA	-18	NA	83189763	83185898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
ES.5778.14	chr11	-	2244	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	51	434	12	0	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGACTTCTTGAAGTT	2442	False	NA	-8	True	AATAAA	-15	NA	83189752	83185901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
ES.5778.18	chr11	-	1303	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	8	1078	4	-1077	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTACCGCTGTGTGT	2434	False	NA	NA	False	NA	NA	NA	83189760	83186978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
ES.5778.19	chr11	-	1144	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	29	1556	-6	-1122	multi-exon	FALSE	canonical	3	9	junction_3	22.7596133534821	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTCGAGTGAATGATA	2420	False	NA	NA	False	AATGAA	-22	NA	83189774	83187023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
ES.5778.2	chr11	-	4376	21	Intergenic	novelGene_4601	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATAAAAGTCCAAAC	7788	False	NA	NA	False	NA	NA	NA	83294837	83182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83182926_83199036_83199098_83207243_83207350_83212762_83212899_83215334_83215583_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83242006_83256478_83256619_83258707_83258852_83260475_83260603_83280521_83280612_83281518_83281605_83288576_83288734_83293393
ES.5778.20	chr11	-	133	1	Intergenic	novelGene_4607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAATCA	1514	False	NA	NA	False	NA	NA	NA	83190680	83190547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83190500_83190700
ES.5778.21	chr11	-	4394	19	Intergenic	novelGene_4608	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGTTAGAAAAAAATCTGAG	7788	False	NA	NA	False	NA	NA	NA	83294837	83212449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83212899_83215334_83215582_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83241995_83255617_83255663_83256472_83256619_83258707_83258852_83260475_83260603_83280521_83280612_83281518_83281608_83288582_83288734_83293393
ES.5778.22	chr11	-	5388	1	Intergenic	novelGene_4609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGATGGCAAATGCC	NA	False	NA	NA	False	NA	NA	NA	83221872	83216484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83216500_83221900
ES.5778.3	chr11	-	4405	22	Intergenic	novelGene_4602	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGATAAAAGTCCAAAC	7788	False	NA	NA	False	NA	NA	NA	83294837	83182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83182926_83199036_83199100_83207244_83207350_83212762_83212899_83215334_83215582_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83241997_83256471_83256619_83258708_83258852_83260475_83260603_83280521_83280613_83281359_83281391_83281518_83281605_83288576_83288734_83293393
ES.5778.4	chr11	-	4367	21	Intergenic	novelGene_4603	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGATAAAAGTCCAAA	7788	False	NA	NA	False	NA	NA	NA	83294837	83182762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83182922_83199038_83199100_83207244_83207350_83212762_83212899_83215334_83215582_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83241997_83256471_83256619_83258707_83258852_83260475_83260603_83280521_83280612_83281518_83281605_83288576_83288734_83293393
ES.5778.5	chr11	-	4406	22	Intergenic	novelGene_4604	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGATAAAAGTCCAAA	7788	False	NA	NA	False	NA	NA	NA	83294837	83182762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83182922_83199038_83199100_83207244_83207350_83212762_83212899_83215334_83215582_83223810_83224001_83226204_83226427_83227165_83227287_83227589_83227686_83230136_83230252_83232096_83232264_83233423_83233523_83237471_83237732_83241802_83241995_83255617_83255663_83256472_83256619_83258707_83258852_83260475_83260599_83280520_83280612_83281518_83281605_83288576_83288734_83293393
ES.5778.7	chr11	-	4335	21	Intergenic	novelGene_4605	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7788	False	NA	NA	False	NA	NA	NA	83294837	83182791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83182922_83199038_83199098_83207243_83207350_83212762_83212899_83215334_83215583_83223810_83224009_83226210_83226427_83227165_83227287_83227589_83227688_83230139_83230249_83232094_83232264_83233423_83233523_83237471_83237732_83241802_83241997_83256471_83256619_83258707_83258855_83260479_83260603_83280521_83280612_83281518_83281605_83288578_83288734_83293393
ES.5778.8	chr11	-	1744	1	Antisense	novelGene_ENSMUSG00000093483.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7659	False	NA	NA	False	NA	NA	NA	83184535	83182791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83182800_83184500
ES.5778.9	chr11	-	169	1	Intergenic	novelGene_4606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAATAAAAAC	8530	False	NA	NA	False	NA	NA	NA	83183664	83183495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83183500_83183700
ES.5779.1	chr11	-	1468	1	Intergenic	novelGene_4611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAATAAGAATGGTT	5211	False	NA	NA	False	NA	NA	NA	83297414	83295946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83295900_83297400
ES.578.1	chr1	+	181	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGTGTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	60047802	60047983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60047800_60048000
ES.5780.1	chr11	+	3168	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	-13	1	-13	0	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGTGTCAGCTCTGTT	1423	False	NA	26	True	ATTAAA	-30	NA	83300500	83311864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
ES.5780.2	chr11	+	2267	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	4	885	4	-883	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCTGAGGGATTGCTC	1440	False	NA	NA	False	NA	NA	NA	83300517	83310980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
ES.5781.1	chr11	-	3518	4	ISM	ENSMUSG00000020682.18	ENSMUST00000108137.9	2451	8	18175	-2054	18065	946	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATAGGTGGTCATTTATG	NA	False	NA	NA	False	AATAAA	-13	NA	83335722	83330647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_83333772_83334584_83334753_83335036_83335187_83335646
ES.5782.1	chr11	-	670	3	ISM	ENSMUSG00000020682.18	ENSMUST00000119346.2	1517	8	11311	4224	11280	4101	internal_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTATGCTGGGTTCTTG	NA	False	NA	NA	False	NA	NA	NA	83342507	83338110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_83338571_83342211_83342400_83342485
ES.5783.1	chr11	-	5834	2	Intergenic	novelGene_4612	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAGAGAATTGTAGCT	NA	False	NA	NA	False	NA	NA	NA	83363176	83356465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83360449_83361325
ES.5784.1	chr11	+	2073	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	-6	1	0	-1	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	8654	False	NA	40	True	AATAAA	-20	NA	83363911	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.10	chr11	+	4271	2	NNC	ENSMUSG00000020680.16	novel	649	2	NA	NA	-7129	-2652	intron_retention	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	NA	False	NA	NA	False	NA	NA	NA	83372723	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83376900_83377124
ES.5784.11	chr11	+	3548	2	NNC	ENSMUSG00000020680.16	novel	848	9	NA	NA	-6644	-2652	intron_retention	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	NA	False	NA	NA	False	NA	NA	NA	83373208	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83376705_83377167
ES.5784.12	chr11	+	1844	3	ISM	ENSMUSG00000020680.16	ENSMUST00000126134.2	848	9	11246	2652	-4666	-2652	internal_fragment	FALSE	canonical	3	38	junction_2	8.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	NA	False	NA	NA	False	NA	NA	NA	83375186	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83375529_83375635_83375721_83375802
ES.5784.13	chr11	+	1039	1	NIC	ENSMUSG00000020680.16	novel	881	7	NA	NA	-4180	-3160	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTGCATTAGGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	83375672	83376711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83375700_83376700
ES.5784.14	chr11	+	3918	2	ISM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	11994	-1295	-3947	1295	3prime_fragment	FALSE	canonical	3	35	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAACCCATCTTAGA	NA	False	NA	NA	False	NA	NA	NA	83375905	83381334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83378240_83379750
ES.5784.15	chr11	+	6008	9	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	4040	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	36.0754417852367	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	NA	False	NA	40	True	AATAAA	-20	NA	83383892	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83385461_83385604_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.16	chr11	+	2886	9	ISM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	22643	2	6708	-2	3prime_fragment	FALSE	canonical	3	37	junction_1	30.5856890555044	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGAGTGCATTATTTG	NA	False	NA	39	True	AATAAA	-19	NA	83386560	83397567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.17	chr11	+	1053	5	ISM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	29667	1	13732	-1	3prime_fragment	FALSE	canonical	3	45	junction_1	37.1045819273038	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	NA	False	NA	40	True	AATAAA	-20	NA	83393584	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.2	chr11	+	1490	6	NNC	ENSMUSG00000020680.16	novel	881	7	NA	NA	0	-2652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.0829767070025	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	8654	False	NA	NA	False	NA	NA	NA	83363911	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83376898_83377122
ES.5784.3	chr11	+	1365	6	NNC	ENSMUSG00000020680.16	novel	881	7	NA	NA	1	-2653	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.0829767070025	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATGTTCATACTATAG	8655	False	NA	NA	False	NA	NA	NA	83363912	83377218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83376820_83377167
ES.5784.4	chr11	+	1251	6	NNC	ENSMUSG00000020680.16	novel	881	7	NA	NA	1	-2652	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.0829767070025	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	8655	False	NA	NA	False	NA	NA	NA	83363912	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83376707_83377169
ES.5784.5	chr11	+	1713	5	ISM	ENSMUSG00000020680.16	ENSMUST00000134185.8	881	7	2	2820	2	-2652	5prime_fragment	FALSE	canonical	3	38	junction_4	6.75925291729789	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGTTCATACTATAGA	8656	False	NA	NA	False	NA	NA	NA	83363913	83377219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802
ES.5784.6	chr11	+	1775	15	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_5	30.8677230538732	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	8662	False	NA	40	True	AATAAA	-20	NA	83363919	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83379750_83379773_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.7	chr11	+	1953	16	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	-4	-1	intron_retention	FALSE	canonical	1	2	junction_7	27.8107892732299	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	8675	False	NA	40	True	AATAAA	-20	NA	83363932	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379773_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ES.5784.8	chr11	+	1688	16	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	28.1050410662097	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	8681	False	NA	40	True	AATAAA	-20	NA	83363938	83397568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395825_83395931_83397243
ES.5784.9	chr11	+	1794	8	NNC	ENSMUSG00000020680.16	novel	2068	16	NA	NA	1	-7640	intron_retention	FALSE	canonical	0	0	junction_7	16.374444997605	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTGCAAGGACTTG	8684	False	NA	NA	False	NA	NA	NA	83363941	83389929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379773_83388719
ES.5785.1	chr11	-	5144	2	Antisense	novelGene_ENSMUSG00000020680.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGCCAGGCTGTTTTCCT	6530	False	NA	NA	False	NA	NA	NA	83386710	83381414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83385457_83385608
ES.5785.2	chr11	-	176	1	Intergenic	novelGene_4613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTTCTATGAA	NA	False	NA	NA	False	NA	NA	NA	83381923	83381747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83381700_83381900
ES.5786.1	chr11	+	3294	1	Intergenic	novelGene_4614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAACAAAACATACTT	NA	False	NA	NA	False	NA	NA	NA	83452306	83455600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83452300_83455600
ES.5787.1	chr11	-	886	3	Intergenic	novelGene_4615	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCATGGTGGCATTTTG	4731	False	NA	-22	True	AATAAA	-20	NA	83458278	83454492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83455094_83457579_83457619_83458032
ES.5787.2	chr11	-	825	2	Intergenic	novelGene_4616	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAATAAAATAAAAA	4721	False	NA	-54	True	NA	NA	NA	83458288	83454524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83455094_83458032
ES.5787.3	chr11	-	853	3	Intergenic	novelGene_4617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	50	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAAAAGCAATAAAATAA	4757	False	NA	-57	True	NA	NA	NA	83458252	83454527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83455094_83457579_83457647_83458032
ES.5788.1	chr11	-	174	1	ISM	ENSMUSG00000019122.9	ENSMUST00000019266.6	3006	4	3802	1742	2308	657	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTGTCTGCCTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	83465660	83465486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_83465500_83465700
ES.5789.1	chr11	+	4390	2	NNC	ENSMUSG00000051832.8	novel	861	2	NA	NA	-5	-15451	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGCTTTCCCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	83472904	83477446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83473008_83473159
ES.579.1	chr1	+	243	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAAAAGTAAAATGTA	2290	False	NA	NA	False	AATAAA	-15	NA	60050109	60050352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60050100_60050400
ES.5790.1	chr11	+	6035	16	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-12	-36	intron_retention	TRUE	canonical	0	0	junction_13	25.8164460933121	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAATAAATAAATT	4005	False	NA	-32	True	NA	NA	NA	83644509	83672811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83667563_83668082_83668189_83670226_83670432_83671976
ES.5790.10	chr11	+	6131	20	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	8	677	intron_retention	FALSE	canonical	0	0	junction_1	26.4243025889619	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGATATTTGTTTAATTG	4025	False	NA	NA	False	ATTAAA	-19	NA	83644529	83673524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83644854_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83651827_83655711_83655850_83656678_83656990_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668082_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.11	chr11	+	4319	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	8	1287	8	446	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAATTTGTGTATTTT	4025	False	NA	NA	False	ATTAAA	-20	NA	83644529	83673293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.12	chr11	+	8613	15	NIC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_13	22.9058632543847	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4026	False	NA	4	True	AATAAA	-23	NA	83644530	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83666662_83667439_83667563_83668082_83670432_83671976
ES.5790.13	chr11	+	5807	20	FSM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	-9	-1731	9	-2	multi-exon	FALSE	canonical	2	8	junction_1	14.4999761199536	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGGTTTCTGGGTCT	4026	False	NA	9	True	AATAAA	-18	NA	83644530	83674578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.14	chr11	+	5892	17	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_13	21.584047205054	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4026	False	NA	4	True	AATAAA	-23	NA	83644530	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83656990_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83665335_83666526_83667563_83668082_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.16	chr11	+	4113	19	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_8	15.0996688705415	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4032	False	NA	4	True	AATAAA	-23	NA	83644536	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.17	chr11	+	9235	16	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	50	junction_5	7.3199878566991	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGGTTTCTGGGTCT	4033	False	NA	9	True	AATAAA	-18	NA	83644537	83674578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83666662_83667439_83667563_83668063_83670432_83671976
ES.5790.18	chr11	+	3741	19	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	16.6232768530556	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAATTGTGTTTTCAA	4033	False	NA	3	True	AATAAA	-22	NA	83644537	83672846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.19	chr11	+	3546	19	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	20.1638351241419	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTGTGTTTTCAAGA	4033	False	NA	5	True	AATAAA	-24	NA	83644537	83672848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.2	chr11	+	4560	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	-1	1055	-1	678	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATATTTGTTTAATTGT	4016	False	NA	NA	False	ATTAAA	-20	NA	83644520	83673525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.20	chr11	+	4320	19	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	0	595	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	15.6777935270415	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAGGGTTATATAAG	4035	False	NA	NA	False	AATAAA	-14	NA	83644539	83673442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.21	chr11	+	5546	18	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_14	21.37132574301	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTGTTTTCAAGAG	4036	False	NA	6	True	AATAAA	-25	NA	83644540	83672849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656990_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83666662_83667439_83667563_83668082_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.22	chr11	+	5881	18	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	5	5	intron_retention	FALSE	canonical	1	3	junction_16	21.0231376901523	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTTTTCAAGAGTGT	4040	False	NA	9	True	AATAAA	-28	NA	83644544	83672852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656990_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83670085_83670226_83670432_83671976
ES.5790.25	chr11	+	5473	19	NIC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	75	-1	intron_retention	FALSE	canonical	2	8	junction_1	14.8735410115487	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGAATTGTGTTTTCAA	4110	False	NA	3	True	AATAAA	-22	NA	83644614	83672846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83669768_83670226_83670432_83671976
ES.5790.26	chr11	+	3980	20	FSM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	87	0	87	0	multi-exon	FALSE	canonical	2	8	junction_1	14.4999761199536	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4122	False	NA	4	True	AATAAA	-23	NA	83644626	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.27	chr11	+	3711	20	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	16.1882964461445	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4136	False	NA	4	True	AATAAA	-23	NA	83644640	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670277_83670432_83671976
ES.5790.28	chr11	+	3942	20	NNC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	20.0034623041894	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4159	False	NA	4	True	AATAAA	-23	NA	83644663	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656993_83657910_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.29	chr11	+	6285	18	NIC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	129	601	intron_retention	FALSE	canonical	2	8	junction_1	14.9309830907199	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGGTTATATAAGAAAGAA	4164	False	NA	NA	False	AATAAA	-20	NA	83644668	83673448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.3	chr11	+	5426	20	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	14.7089962484569	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTTGGTTTCTGGGTC	4020	False	NA	8	True	AATAAA	-17	NA	83644524	83674577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.30	chr11	+	3643	19	NIC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	-28	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	20.2472372753408	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGAATTGTGTTTTCA	4322	False	NA	2	True	AATAAA	-21	NA	83644826	83672845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.31	chr11	+	3762	20	NNC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.2548855294626	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGAATTGTGTTTTCA	4332	False	NA	2	True	AATAAA	-21	NA	83644836	83672845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671982
ES.5790.32	chr11	+	6704	15	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	2721	2	intron_retention	FALSE	canonical	3	50	junction_3	6.79473085169227	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTGTTTTCAAGAG	7071	False	NA	6	True	AATAAA	-25	NA	83647575	83672849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.33	chr11	+	3156	15	ISM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	7184	0	210	0	3prime_fragment	FALSE	canonical	3	55	junction_2	5.55721630505998	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	3083	False	NA	4	True	AATAAA	-23	NA	83651723	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.34	chr11	+	3303	14	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	4214	448	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	17.2232126287298	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTGTGTATTTTGG	7087	False	NA	NA	False	ATTAAA	-22	NA	83655727	83673295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.35	chr11	+	2082	7	ISM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	12586	6068	5612	-2964	internal_fragment	FALSE	canonical	3	63	junction_4	4.04145188432738	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTGGCGAGAACAGTG	1043	False	NA	NA	False	AATAAA	-17	NA	83657125	83666779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526
ES.5790.36	chr11	+	4967	9	NIC	ENSMUSG00000000976.14	novel	4067	20	NA	NA	6506	0	intron_retention	FALSE	canonical	3	63	junction_7	3.44374432848898	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	1937	False	NA	4	True	AATAAA	-23	NA	83658019	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83658082_83659881_83660089_83660493_83660594_83663070_83665335_83666526_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.37	chr11	+	3084	1	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	6245	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGGTTTCTGGGTCT	6889	False	NA	9	True	AATAAA	-18	NA	83671494	83674578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83671500_83674600
ES.5790.4	chr11	+	5607	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	7	0	7	0	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGGTTTCTGGGTCTCT	4024	False	NA	11	True	AATAAA	-20	NA	83644528	83674580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.5	chr11	+	3693	20	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	14.7089962484569	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTGTGTTTTCAAGA	4024	False	NA	5	True	AATAAA	-24	NA	83644528	83672848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656805_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.6	chr11	+	3875	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	7	1732	7	1	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTGTGTTTTCAAGA	4024	False	NA	5	True	AATAAA	-24	NA	83644528	83672848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.7	chr11	+	4675	20	FSM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	-10	-598	8	598	multi-exon	FALSE	canonical	2	8	junction_1	14.4999761199536	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGGGTTATATAAGAAA	4025	False	NA	NA	False	AATAAA	-17	NA	83644529	83673445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.8	chr11	+	5782	18	NIC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	8	0	intron_retention	FALSE	canonical	3	55	junction_6	5.68674778287386	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4025	False	NA	4	True	AATAAA	-23	NA	83644529	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ES.5790.9	chr11	+	6104	18	NNC	ENSMUSG00000000976.14	novel	5614	20	NA	NA	8	0	intron_retention	FALSE	canonical	1	3	junction_16	20.9512533587143	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4025	False	NA	4	True	AATAAA	-23	NA	83644529	83672847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656990_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83665335_83666526_83666662_83667439_83667563_83668063_83670085_83670226_83670432_83671976
ES.5791.1	chr11	-	2547	1	Antisense	novelGene_ENSMUSG00000000976.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAACCCAG	NA	False	NA	NA	False	GGGGCT	-9	NA	83665350	83662803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83662800_83665400
ES.5792.1	chr11	-	158	1	Intergenic	novelGene_4618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	83721759	83721601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83721600_83721800
ES.5793.1	chr11	-	158	1	Intergenic	novelGene_4619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	83816972	83816814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83816800_83817000
ES.5794.1	chr11	+	3187	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	13	-6	13	6	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGTTCTTGCAGA	NA	False	NA	NA	False	AATAAA	-32	NA	83832900	83853920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.10	chr11	+	9089	11	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	83	0	intron_retention	FALSE	canonical	3	305	junction_4	27.5927526716709	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832970	83853914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83848364_83850272
ES.5794.11	chr11	+	4699	13	NNC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	86	-898	intron_retention	FALSE	canonical	0	0	junction_6	97.3100357391546	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTGTGTGTATGGAGA	NA	False	NA	23	True	AATAAA	-24	NA	83832973	83853016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83843142_83843907_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.13	chr11	+	5727	35	Fusion	ENSMUSG00000034940.16_ENSMUSG00000020677.8	novel	3194	15	NA	NA	101	61	multi-exon	FALSE	canonical	0	0	junction_14	129.859083193627	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCCTGCCACTGGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83832988	83931841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.17	chr11	+	179	1	Intergenic	novelGene_4620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	83841535	83841714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83841500_83841700
ES.5794.18	chr11	+	7446	22	NIC	ENSMUSG00000034940.16	novel	3995	22	NA	NA	-42	16	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	26.7661409966935	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCCCGTGTCTAGCA	1390	False	NA	39	True	NA	NA	NA	83855211	83935420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.19	chr11	+	3826	21	NIC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	-35	63	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	16.4392061852147	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGCCACTGGTCTCT	1397	False	NA	NA	False	AATAAA	-21	NA	83855218	83931843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.2	chr11	+	3886	14	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	57	0	intron_retention	FALSE	canonical	3	305	junction_4	24.535205957174	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832944	83853914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.21	chr11	+	6519	1	Genic_Genomic	ENSMUSG00000034940.16	novel	NA	NA	NA	NA	-13	-18878	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAAAGACCATGGCTG	1419	False	NA	NA	False	AATAAA	-1	NA	83855240	83861759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_83855200_83861800
ES.5794.22	chr11	+	5479	15	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-9	20798	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	19.5830257610816	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGGATGTGTGTAATT	1423	False	NA	13	True	AATAAA	-24	NA	83855244	83902911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ES.5794.23	chr11	+	4861	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-49	-1161	-1	678	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTGCAGAGGAGCCAG	1431	False	NA	NA	False	NA	NA	NA	83855252	83932915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.24	chr11	+	7353	21	NIC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	16.4392061852147	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCTGTTCTGAAAC	1431	False	NA	23	True	AATAAA	-33	NA	83855252	83935404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.25	chr11	+	4514	22	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	25.2169722926837	144	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCGCAAGTTTGTCTTCA	1432	False	NA	NA	False	AAGAAA	-22	NA	83855253	83932272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914245_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.27	chr11	+	4081	22	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	23.438538336788	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAAGCCCCCTGCCACT	1432	False	NA	NA	False	AATAAA	-14	NA	83855253	83931836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915109_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.28	chr11	+	3310	22	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	25.2509401275331	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGCCACTGGTCTCT	1432	False	NA	NA	False	AATAAA	-21	NA	83855253	83931843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83899596_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.29	chr11	+	3822	22	NIC	ENSMUSG00000034940.16	novel	3995	22	NA	NA	1	59	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	26.7661409966935	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCCCTGCCACTGGT	1433	False	NA	NA	False	AATAAA	-17	NA	83855254	83931839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.3	chr11	+	817	4	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	60	16643	60	-5716	5prime_fragment	FALSE	canonical	3	311	junction_3	37.1872140511882	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTAGATGCCATCATT	NA	False	NA	NA	False	TATAAA	-11	NA	83832947	83837271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930
ES.5794.30	chr11	+	7327	22	NNC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	31.8006831170655	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGGGTGTCTGTTCT	1433	False	NA	18	True	AATAAA	-28	NA	83855254	83935399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877787_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83920301_83920434_83930036_83930148_83931622
ES.5794.32	chr11	+	4091	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	1	61	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCCTGCCACTGGTCT	1433	False	NA	NA	False	AATAAA	-19	NA	83855254	83931841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.33	chr11	+	8090	21	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	5	666	intron_retention	FALSE	canonical	3	33	junction_6	16.2987729599501	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGACTG	1437	False	NA	NA	False	NA	NA	NA	83855258	83932903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.34	chr11	+	3543	20	NNC	ENSMUSG00000034940.16	novel	7115	20	NA	NA	5	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1112109655046	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCCTGCCACTGGTCT	1437	False	NA	NA	False	AATAAA	-19	NA	83855258	83931841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855369_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.35	chr11	+	5158	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	5	678	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTGCAGAGGAGCCAG	1437	False	NA	NA	False	NA	NA	NA	83855258	83932915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.36	chr11	+	5162	14	ISM	ENSMUSG00000034940.16	ENSMUST00000049714.15	3995	22	5	28869	5	20798	5prime_fragment	FALSE	canonical	3	32	junction_6	19.2986494300116	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGGATGTGTGTAATT	1437	False	NA	13	True	AATAAA	-24	NA	83855258	83902911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ES.5794.37	chr11	+	3536	20	NNC	ENSMUSG00000034940.16	novel	7115	20	NA	NA	5	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	29.4818597683671	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAAGCCCCCTGCCACT	1437	False	NA	NA	False	AATAAA	-14	NA	83855258	83931836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914245_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.38	chr11	+	4203	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	10	185	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCACTGGACATTTGCT	1442	False	NA	NA	False	NA	NA	NA	83855263	83931965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.39	chr11	+	4374	22	NIC	ENSMUSG00000034940.16	novel	3995	22	NA	NA	11	164	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	26.7661409966935	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGATGATGCTCTGTCC	1443	False	NA	NA	False	AATAAA	-17	NA	83855264	83932401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.4	chr11	+	3256	15	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	60	-16	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	90.4887240692091	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAAACTAAAAGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	83832947	83853898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842327_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.40	chr11	+	7661	23	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.4501884552721	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTGTAAAACTGGGTGT	1446	False	NA	11	True	AATAAA	-21	NA	83855267	83935392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869749_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.42	chr11	+	4103	23	FSM	ENSMUSG00000034940.16	ENSMUST00000183456.8	3990	23	-24	-89	-24	63	multi-exon	FALSE	canonical	2	4	junction_22	27.7269746630775	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGCCACTGGTCTCT	1456	False	NA	NA	False	AATAAA	-21	NA	83855277	83931843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.44	chr11	+	4082	24	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-23	61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	35.8277753928851	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCCTGCCACTGGTCT	1457	False	NA	NA	False	AATAAA	-19	NA	83855278	83931841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877678_83877787_83877876_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914245_83915103_83915158_83915820_83915918_83917443_83917593_83920301_83920434_83930036_83930148_83931622
ES.5794.46	chr11	+	4059	22	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-19	63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	23.438538336788	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGCCACTGGTCTCT	1461	False	NA	NA	False	AATAAA	-21	NA	83855282	83931843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914245_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.47	chr11	+	4625	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-18	167	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATGATGCTCTGTCCTGG	1462	False	NA	NA	False	AATAAA	-20	NA	83855283	83932404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.49	chr11	+	4486	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-16	30	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAATCCGCAAGTTTGT	1464	False	NA	NA	False	AAGAAA	-17	NA	83855285	83932267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.5	chr11	+	5478	13	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	60	0	intron_retention	FALSE	canonical	3	305	junction_4	25.4955061399717	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832947	83853914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.50	chr11	+	5130	15	NNC	ENSMUSG00000034940.16	novel	3995	22	NA	NA	-15	20788	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	36.3349637654523	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAAAGTGTGGGGAT	1465	False	NA	3	True	AATAAA	-14	NA	83855286	83902901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83858184_83858273_83862377_83862419_83867905_83868028_83869745_83869795_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ES.5794.52	chr11	+	5269	23	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-13	780	combination_of_known_junctions	FALSE	canonical	2	4	junction_22	26.3327405170919	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGTTCCTCATGCTGT	1467	False	NA	NA	False	NA	NA	NA	83855288	83933017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.53	chr11	+	7541	23	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-13	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.9174317428012	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGTAAAACTGGGTG	1467	False	NA	10	True	AATAAA	-20	NA	83855288	83935391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881552_83881617_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.54	chr11	+	7620	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCTGTTCTGAAAC	1467	False	NA	23	True	AATAAA	-33	NA	83855288	83935404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.55	chr11	+	3870	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-13	-206	-13	180	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACGTGGCACTGGACAT	1467	False	NA	NA	False	NA	NA	NA	83855288	83931960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.57	chr11	+	7804	22	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	24.9982312299461	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCTGTTCTGAAAC	1468	False	NA	23	True	AATAAA	-33	NA	83855289	83935404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917781_83930036_83930148_83931622
ES.5794.58	chr11	+	4144	19	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	-12	13438	-12	-12520	5prime_fragment	FALSE	canonical	3	30	junction_2	20.0650946843357	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCTGGGTGTTGCAAT	1468	False	NA	NA	False	AATAAA	-13	NA	83855289	83918316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443
ES.5794.59	chr11	+	4288	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	-11	63	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	23.4480174814316	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGCCACTGGTCTCT	1469	False	NA	NA	False	AATAAA	-21	NA	83855290	83931843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910185_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.6	chr11	+	2236	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	61	897	61	-897	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGTGTGTATGGAGAG	NA	False	NA	24	True	AATAAA	-25	NA	83832948	83853017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.61	chr11	+	7214	21	NNC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.2487167850152	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCTGTTCTGAAAC	1470	False	NA	23	True	AATAAA	-33	NA	83855291	83935404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880599_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914245_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.63	chr11	+	1466	7	NNC	ENSMUSG00000034940.16	novel	3995	22	NA	NA	-6	-1018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.7253272875718	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	1474	False	NA	NA	False	NA	NA	NA	83855295	83879619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83855369_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738
ES.5794.64	chr11	+	4833	13	ISM	ENSMUSG00000034940.16	ENSMUST00000092834.12	7115	20	86	32504	38	20787	5prime_fragment	FALSE	canonical	1	1	junction_6	30.1436376187229	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTGAAAGTGTGGGGA	1518	False	NA	2	True	AATAAA	-13	NA	83855339	83902900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ES.5794.65	chr11	+	7326	17	NNC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	1906	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.7520324531567	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCTGTTCTGAAAC	9401	False	NA	23	True	AATAAA	-33	NA	83875027	83935404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83899596_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ES.5794.66	chr11	+	3779	14	ISM	ENSMUSG00000034940.16	ENSMUST00000183456.8	3990	23	20849	13438	3029	-12520	internal_fragment	FALSE	canonical	3	33	junction_1	13.7526759096023	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCTGGGTGTTGCAAT	609	False	NA	NA	False	AATAAA	-13	NA	83876150	83918316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443
ES.5794.68	chr11	+	5837	7	ISM	ENSMUSG00000034940.16	ENSMUST00000092834.12	7115	20	21953	32490	-3430	20801	internal_fragment	FALSE	canonical	3	72	junction_5	9.26312882106017	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGATGTGTGTAATTTGT	1665	False	NA	16	True	AATAAA	-27	NA	83877206	83902914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
ES.5794.69	chr11	+	3964	16	NNC	ENSMUSG00000034940.16	novel	3651	21	NA	NA	-3153	164	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	27.2587600598413	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGATGATGCTCTGTCC	1942	False	NA	NA	False	AATAAA	-17	NA	83877483	83932401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83889655_83889746_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ES.5794.7	chr11	+	1835	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	63	1296	63	-1296	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAGTTAAAAAAT	NA	False	NA	NA	False	AAAAAG	-37	NA	83832950	83852618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.8	chr11	+	9157	9	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	63	0	intron_retention	FALSE	canonical	3	311	junction_3	27.3378743687215	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832950	83853914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83839415_83840408_83844144_83845906_83846874_83848291_83848364_83850272_83850360_83852575
ES.5794.9	chr11	+	3973	14	NIC	ENSMUSG00000020677.8	novel	3194	15	NA	NA	80	-904	intron_retention	FALSE	canonical	3	267	junction_7	30.7236200406522	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCACACTTGTGTGTA	NA	False	NA	17	True	AATAAA	-18	NA	83832967	83853010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ES.5795.1	chr11	-	1448	1	Antisense	novelGene_ENSMUSG00000020677.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAACTTTATCCCTC	NA	False	NA	NA	False	NA	NA	NA	83837642	83836194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83836200_83837600
ES.5796.1	chr11	-	1753	1	Antisense	novelGene_ENSMUSG00000034940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCCCCCCCCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83915054	83913301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83913300_83915100
ES.5797.1	chr11	-	4812	1	Antisense	novelGene_ENSMUSG00000034940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83931332	83926520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83926500_83931300
ES.5797.2	chr11	-	4431	2	Antisense	novelGene_ENSMUSG00000034940.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83931331	83926566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83930147_83930480
ES.5797.3	chr11	-	2494	1	Antisense	novelGene_ENSMUSG00000034940.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCATAAAC	NA	False	NA	NA	False	NA	NA	NA	83931331	83928837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_83928800_83931300
ES.5798.1	chr11	+	212	1	Intergenic	novelGene_4621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTCTTAAGTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	83952971	83953183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83953000_83953200
ES.5799.1	chr11	+	409	1	Intergenic	novelGene_4622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAATATGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	83955791	83956200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83955800_83956200
ES.58.1	chr1	+	178	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6234	False	NA	NA	False	NA	NA	NA	9456825	9457003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9456800_9457000
ES.580.1	chr1	+	178	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACAAAAAGAAAACCTAAT	4639	False	NA	NA	False	NA	NA	NA	60052458	60052636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60052500_60052600
ES.5800.1	chr11	-	1497	4	NNC	ENSMUSG00000018648.16	novel	1571	4	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.077702307171	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTTTATTAATCATTT	NA	False	NA	-16	True	AATAAA	-13	NA	83959640	83938868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83940137_83941657_83941747_83959306_83959407_83959600
ES.5800.2	chr11	-	1419	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	26	2	26	-2	multi-exon	FALSE	canonical	3	59	junction_2	13.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTTTATTAATCATTT	NA	False	NA	-16	True	AATAAA	-13	NA	83959157	83938868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83940137_83941657_83941747_83959095
ES.5801.1	chr11	-	173	1	Intergenic	novelGene_4623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	83961526	83961353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_83961400_83961500
ES.5802.1	chr11	+	169	1	Intergenic	novelGene_4624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAACAAAAT	4388	False	NA	NA	False	NA	NA	NA	83968836	83969005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83968800_83969000
ES.5803.1	chr11	+	271	1	Intergenic	novelGene_4625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9723	False	NA	NA	False	NA	NA	NA	83974171	83974442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83974200_83974400
ES.5804.1	chr11	+	1003	1	Intergenic	novelGene_4627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	83991999	83993002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83992000_83993000
ES.5804.2	chr11	+	834	1	Intergenic	novelGene_4626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCAACCAACCAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	83991999	83992833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_83992000_83992800
ES.5805.1	chr11	+	2235	1	Antisense	novelGene_ENSMUSG00000018651.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	84010980	84013215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_84011000_84013200
ES.5806.1	chr11	-	3354	17	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-33	1539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	139.188664678558	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTTTTAATCT	NA	False	NA	NA	False	NA	NA	NA	84020459	83968206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83968588_83968956_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.10	chr11	-	2182	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-33	2	-33	-2	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020459	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.11	chr11	-	3058	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-28	-2	intron_retention	FALSE	canonical	3	409	junction_9	49.7241369549876	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020454	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.12	chr11	-	2894	13	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	2	-2	intron_retention	FALSE	canonical	0	0	junction_1	200.255305797375	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020424	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83975539_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
ES.5806.13	chr11	-	2137	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	142.87141071607	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020421	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000865_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.16	chr11	-	2171	17	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	180.504674454708	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020412	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84016596_84016633_84017813_84017922_84020362
ES.5806.17	chr11	-	2089	15	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-38	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	193.036953213944	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020464	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83976501_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020379
ES.5806.18	chr11	-	1953	15	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	196.455803307159	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020384	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977932_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.19	chr11	-	2031	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	141.27466373078	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020415	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84017813_84017922_84020362
ES.5806.2	chr11	-	2459	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-33	-275	-33	275	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCGGCTGTGGGGTGA	NA	False	NA	0	True	AATAAA	-39	NA	84020459	83969470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.20	chr11	-	1976	15	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	194.678555048876	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020428	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020379
ES.5806.21	chr11	-	1871	14	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	202.152968034622	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020439	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.23	chr11	-	2214	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	141.198300273056	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020415	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976388_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.24	chr11	-	2013	14	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_12	140.170690535529	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020457	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84017813_84017922_84020362
ES.5806.25	chr11	-	2145	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	141.564684861727	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020439	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020379
ES.5806.26	chr11	-	2045	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	143.607973316247	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	84020430	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84020362
ES.5806.27	chr11	-	2046	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	189.392045605869	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGGGTGTGTCAGA	NA	False	NA	-7	True	ATTAAA	-14	NA	84020421	83969748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976501_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
ES.5806.28	chr11	-	2171	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-83	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	142.244346396026	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGGGTGTGTCAGA	NA	False	NA	-7	True	ATTAAA	-14	NA	84020509	83969748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
ES.5806.3	chr11	-	5681	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	5	252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	143.70052191972	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAAAGCCGCTTTCTGT	NA	False	NA	-23	True	AATAAA	-16	NA	84020421	83969493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83981221_83981303_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.30	chr11	-	1950	14	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	221.063218888991	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGGGTGTGTCAGA	NA	False	NA	-7	True	ATTAAA	-14	NA	84020433	83969748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976501_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84020362
ES.5806.31	chr11	-	1725	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	-4	430	-4	181	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTTGTAAGTCAAACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	84020430	83970175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.32	chr11	-	1600	15	NNC	ENSMUSG00000018651.15	novel	743	2	NA	NA	27	-529	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	147.30118042671	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTGACTTTTTCTACT	NA	False	NA	NA	False	AATGAA	-15	NA	84020399	83973392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83973801_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.33	chr11	-	1740	11	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	38	-4306	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_6	170.025439273069	347	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAGGGTTGTTGACTTG	NA	False	NA	NA	False	NA	NA	NA	84020388	83980562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997169_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.34	chr11	-	1303	5	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	-28	-29501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	255.935905062185	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGATCATTTGTTGGT	NA	False	NA	NA	False	AAGAAA	-9	NA	84020454	84005757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84006694_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.5	chr11	-	2395	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	11	249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	142.87141071607	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGTAAAGCCGCTTTC	NA	False	NA	-26	True	AATAAA	-13	NA	84020415	83969496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009067_84009134_84011907_84012015_84017813_84017922_84020362
ES.5806.6	chr11	-	2104	13	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	8490	247	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	152.495605583316	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAGTAAAGCCGCTT	NA	False	NA	-28	True	AATAAA	-11	NA	84011936	83969498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_83970604_83972863_83972938_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907
ES.5806.7	chr11	-	7927	8	FSM	ENSMUSG00000018651.15	ENSMUST00000141852.2	891	8	-6320	-716	-6320	0	multi-exon	FALSE	canonical	3	492	junction_6	27.9744781644167	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	83991000	83969745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409
ES.5806.8	chr11	-	3467	5	ISM	ENSMUSG00000018651.15	ENSMUST00000141852.2	891	8	4386	-716	-1956	0	3prime_fragment	FALSE	canonical	3	510	junction_4	24.1246761636296	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	83980294	83969745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936
ES.5806.9	chr11	-	3118	2	ISM	ENSMUSG00000018651.15	ENSMUST00000156151.8	399	3	-1343	-609	-1343	-2	intron_retention	FALSE	canonical	3	538	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGGGTGTGTCAGAT	NA	False	NA	-6	True	ATTAAA	-15	NA	83975125	83969747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_83970604_83972863
ES.5807.1	chr11	+	9558	57	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	45.0648590129509	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	1264	False	NA	12	True	AATAAA	-20	NA	84020525	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84020957_84023229_84023278_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.10	chr11	+	9100	56	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-21	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	47.95574406085	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCGTTTGTCATTTC	NA	False	NA	10	True	AATAAA	-18	NA	84070635	84292475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122480_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161231_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213455_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.13	chr11	+	9424	55	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.8390713032346	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	NA	False	NA	8	True	AATAAA	-16	NA	84070646	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84071020_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.14	chr11	+	8653	51	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	45.9562444070444	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCGTTTGTCATTTCA	NA	False	NA	11	True	AATAAA	-19	NA	84070646	84292476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.16	chr11	+	9310	57	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0648590129509	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070657	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84070753_84072963_84073100_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.19	chr11	+	9131	56	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	280	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.0520576676828	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	NA	False	NA	8	True	AATAAA	-16	NA	84070963	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84071020_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.2	chr11	+	9235	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	39.807290417339	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070572	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.20	chr11	+	9182	55	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	486	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.9349592741885	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCGTTTGTCATTTC	NA	False	NA	10	True	AATAAA	-18	NA	84071169	84292475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84071299_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.21	chr11	+	8484	50	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	27702	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	43.2123279801346	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGAGCCACCGTTTGT	NA	False	NA	4	True	AATAAA	-12	NA	84113965	84292469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213460_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.22	chr11	+	179	1	Intergenic	novelGene_4631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	84117837	84118016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84117800_84118000
ES.5807.25	chr11	+	6352	34	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-18060	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_29	47.6066489171449	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCACCGTTTGTCATTT	NA	False	NA	9	True	AATAAA	-17	NA	84153220	84292474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.27	chr11	+	5972	32	NNC	ENSMUSG00000020532.19	novel	684	8	NA	NA	-10309	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.8763194378747	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	49	False	NA	8	True	AATAAA	-16	NA	84160971	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84161031_84161142_84161268_84167417_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.28	chr11	+	6095	31	NIC	ENSMUSG00000020532.19	novel	9513	56	NA	NA	-10258	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_26	49.5682357967277	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	100	False	NA	12	True	AATAAA	-20	NA	84161022	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.29	chr11	+	6108	32	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	74770	-6	-10247	0	3prime_fragment	FALSE	canonical	1	3	junction_27	51.8515250032368	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	111	False	NA	12	True	AATAAA	-20	NA	84161033	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.3	chr11	+	9208	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	41.0147853831693	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070576	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.30	chr11	+	8485	31	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-10049	2	intron_retention	FALSE	canonical	1	3	junction_26	51.1754715551199	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	309	False	NA	8	True	AATAAA	-16	NA	84161231	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.31	chr11	+	5962	31	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	81005	-3	-4012	-3	3prime_fragment	FALSE	canonical	1	3	junction_26	52.5355012243044	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCACCGTTTGTCATTT	6346	False	NA	9	True	AATAAA	-17	NA	84167268	84292474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.32	chr11	+	5273	25	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	98450	-1	13433	1	3prime_fragment	FALSE	canonical	1	3	junction_20	53.7664541998282	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCACCGTTTGTCAT	4379	False	NA	7	True	AATAAA	-15	NA	84184713	84292472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.33	chr11	+	181	1	Intergenic	novelGene_4632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTCAA	1141	False	NA	NA	False	NA	NA	NA	84196744	84196925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84196700_84196900
ES.5807.34	chr11	+	5162	22	NNC	ENSMUSG00000020532.19	novel	9513	56	NA	NA	26258	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	56.7144656348352	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	1935	False	NA	12	True	AATAAA	-20	NA	84197538	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84197739_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.36	chr11	+	5104	21	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	111533	-2	26516	2	3prime_fragment	FALSE	canonical	1	3	junction_16	51.7313009695291	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	2193	False	NA	8	True	AATAAA	-16	NA	84197796	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.37	chr11	+	5035	22	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	26662	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	63.0023575126693	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	2339	False	NA	8	True	AATAAA	-16	NA	84197942	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84282661_84282739_84283041_84283213_84288884_84289022_84290385
ES.5807.38	chr11	+	5083	20	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	115663	-3	30646	-3	3prime_fragment	FALSE	canonical	1	3	junction_15	50.5027357257948	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCACCGTTTGTCATTT	6323	False	NA	9	True	AATAAA	-17	NA	84201926	84292474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.4	chr11	+	9228	56	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_51	41.1637969800914	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070603	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.40	chr11	+	4547	18	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	120334	-3	35317	-3	3prime_fragment	FALSE	canonical	1	3	junction_13	52.1691420014038	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCACCGTTTGTCATTT	NA	False	NA	9	True	AATAAA	-17	NA	84206597	84292474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.41	chr11	+	6363	10	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	80836	-2	intron_retention	FALSE	canonical	1	3	junction_6	68.3731591261431	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCGTTTGTCATTTC	2711	False	NA	10	True	AATAAA	-18	NA	84252116	84292475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84283213_84288884_84289022_84290385
ES.5807.42	chr11	+	4289	11	ISM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	167374	-2	82357	2	3prime_fragment	FALSE	canonical	1	3	junction_6	65.3081924416838	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	4232	False	NA	8	True	AATAAA	-16	NA	84253637	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.43	chr11	+	133	1	Intergenic	novelGene_4633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAATAAAAAAAATAAAA	7327	False	NA	NA	False	NA	NA	NA	84256732	84256865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84256700_84256900
ES.5807.44	chr11	+	2698	6	NNC	ENSMUSG00000020532.19	novel	9513	56	NA	NA	100598	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	81.4331627778266	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	NA	False	NA	8	True	AATAAA	-16	NA	84271878	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84271913_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.5	chr11	+	9149	54	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_49	39.579158530227	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070611	84292477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.7	chr11	+	9196	56	NNC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	45.3616869684991	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCACCGTTTGTCATT	NA	False	NA	8	True	AATAAA	-16	NA	84070615	84292473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151458_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263529_84271322_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5807.8	chr11	+	7500	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	-41	-1686	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	39.807290417339	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGGTCTTACTAGACT	NA	False	NA	NA	False	AATGAA	-16	NA	84070615	84290785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ES.5808.1	chr11	-	136	1	Intergenic	novelGene_4628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	84046622	84046486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84046500_84046600
ES.5809.1	chr11	-	159	1	Intergenic	novelGene_4629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	84052758	84052599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84052600_84052800
ES.581.1	chr1	-	3499	11	FSM	ENSMUSG00000026018.13	ENSMUST00000027172.13	3650	11	146	5	146	2	multi-exon	FALSE	canonical	0	0	junction_2	1.7	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGTGTTCTCTAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	60082100	60028231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226_60067396_60081955
ES.581.2	chr1	-	3535	11	NIC	ENSMUSG00000026018.13	novel	3415	11	NA	NA	-71	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.6	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGCAATGTGTTCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	60082414	60028236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226_60067396_60082228
ES.581.3	chr1	-	1914	11	NNC	ENSMUSG00000026018.13	novel	3415	11	NA	NA	30	544	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.113552872566	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGATGTAAAATCCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	60082313	60029738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061792_60067226_60067396_60082228
ES.581.4	chr1	-	1698	11	NIC	ENSMUSG00000026018.13	novel	3415	11	NA	NA	1	332	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.73205080756888	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTCGGGTGTTTTCTGT	NA	False	NA	NA	False	TATAAA	-29	NA	60082342	60029950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60030348_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226_60067396_60082228
ES.581.5	chr1	-	182	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	60059714	60059532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60059500_60059700
ES.581.6	chr1	-	1015	4	NNC	ENSMUSG00000026018.13	novel	951	4	NA	NA	191	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.05480466765633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATGCATTGGAGTTAA	NA	False	NA	NA	False	AATAAA	-12	NA	60082055	60059949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60060544_60061736_60061810_60067226_60067396_60081876
ES.5810.1	chr11	-	2129	1	Intergenic	novelGene_4630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACACAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84090451	84088322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84088300_84090500
ES.5811.1	chr11	-	4165	1	Antisense	novelGene_ENSMUSG00000020532.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGAGAAATGTCCACAA	NA	False	NA	NA	False	NA	NA	NA	84188853	84184688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_84184700_84188900
ES.5811.2	chr11	-	3221	2	Antisense	novelGene_ENSMUSG00000020532.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGGAGAAATGTCCACAA	NA	False	NA	NA	False	NA	NA	NA	84188853	84184688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_84184818_84185761
ES.5812.1	chr11	-	4624	1	Antisense	novelGene_ENSMUSG00000020532.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAAAGCATTCTTGAG	NA	False	NA	NA	False	NA	NA	NA	84282633	84278009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_84278000_84282600
ES.5813.1	chr11	+	135	1	Intergenic	novelGene_4634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84305441	84305576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84305400_84305600
ES.5814.1	chr11	-	157	1	Intergenic	novelGene_4635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	84310086	84309929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84309900_84310100
ES.5815.1	chr11	+	175	1	Intergenic	novelGene_4636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	84319078	84319253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84319100_84319300
ES.5816.1	chr11	+	4903	1	Intergenic	novelGene_4637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTCATTTAGAAAAATAAA	NA	False	NA	NA	False	AATAAA	-41	NA	84349323	84354226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84349300_84354200
ES.5817.1	chr11	-	1962	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	-142	2	-142	-2	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGTCTTCACTGTGA	NA	False	NA	-2	True	AATAAA	-42	NA	84404490	84313682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.10	chr11	-	1949	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	30	-9	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	181.946510118712	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404318	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84326559_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.11	chr11	-	1897	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	29	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	186.515351462985	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTGTCACTGTCTT	NA	False	NA	-10	True	AATAAA	-34	NA	84404319	84313690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84357854_84357969_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.12	chr11	-	4415	5	NNC	ENSMUSG00000018697.15	novel	1009	9	NA	NA	-3527	-10	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	236.047135123475	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTGTCACTGTCTT	NA	False	NA	-10	True	AATAAA	-34	NA	84343886	84313690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84326559_84326726_84333391_84333464_84336452_84336534_84339945
ES.5817.13	chr11	-	2088	15	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	30	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	232.901934780477	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTGTCACTGTCTT	NA	False	NA	-10	True	AATAAA	-34	NA	84404318	84313690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84348528_84348719_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84384606_84384723_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.14	chr11	-	2468	13	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	30	-9217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	144.988193963815	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATGTTGTCATGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	84404318	84322925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84323767_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.15	chr11	-	5262	12	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	8	-9266	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	197.410634662082	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTGCATATCACTGA	NA	False	NA	NA	False	AATAAA	-12	NA	84404340	84322974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.16	chr11	-	4077	13	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	50	9079	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	140.912995221244	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTTTCCTATTTG	NA	False	NA	NA	False	AATAAA	-14	NA	84404298	84324255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.17	chr11	-	3186	13	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	30	8168	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	140.912995221244	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCCATCTTGTAAAGTG	NA	False	NA	NA	False	AAGAAA	-11	NA	84404318	84325166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.18	chr11	-	2116	13	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	26	7094	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	140.912995221244	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTGTCTTGAAGTGA	NA	False	NA	NA	False	NA	NA	NA	84404322	84326240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.19	chr11	-	2044	9	FSM	ENSMUSG00000018697.15	ENSMUST00000148434.2	1992	9	-25	-27	-25	27	multi-exon	FALSE	canonical	3	481	junction_4	26.8348537353942	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	84404373	84357703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.2	chr11	-	1988	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	15	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	184.736626855032	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404333	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84348528_84348719_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.20	chr11	-	4981	8	NIC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	30	0	intron_retention	FALSE	canonical	3	481	junction_3	25.7840323946937	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84404318	84357730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.21	chr11	-	1598	5	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	-573	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	218.783568852873	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84382949	84357730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84382470
ES.5817.22	chr11	-	2058	9	NNC	ENSMUSG00000018697.15	novel	1992	9	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	173.539575817737	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84404355	84357731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400683_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.23	chr11	-	2883	3	ISM	ENSMUSG00000018697.15	ENSMUST00000148434.2	1992	9	40356	1	18384	-1	intron_retention	FALSE	canonical	3	488	junction_1	10.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84363992	84357731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84358371_84361389_84361555_84361913
ES.5817.24	chr11	-	5121	3	NNC	ENSMUSG00000018697.15	novel	1009	9	NA	NA	3233	-20387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGGACTTCCCGTACATT	NA	False	NA	NA	False	ATTAAA	-15	NA	84401115	84378117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84382950_84400484_84400683_84401024
ES.5817.25	chr11	-	5140	6	NNC	ENSMUSG00000018697.15	novel	1009	9	NA	NA	29	-20923	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	216.526765089215	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTTCTGCCTTGGTGTC	NA	False	NA	NA	False	AGTAAA	-16	NA	84404319	84378653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84382950_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.3	chr11	-	3958	5	NNC	ENSMUSG00000018697.15	novel	1009	9	NA	NA	-8994	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	214.858529037132	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84349353	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84345772
ES.5817.4	chr11	-	2055	15	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	-14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	211.630019860422	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404362	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84345772_84345900_84346050_84346152_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.5	chr11	-	3204	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	29	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	219.632721934548	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404319	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84381589_84382950_84400484_84400683_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.6	chr11	-	1941	14	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.185306202021	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404323	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84326572_84326726_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.8	chr11	-	1821	13	NNC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	145.306070646297	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404350	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358377_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5817.9	chr11	-	1688	12	NIC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	-13	-9	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	148.688370106605	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTCACTGTCTTC	NA	False	NA	-9	True	AATAAA	-35	NA	84404361	84313689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ES.5818.1	chr11	-	175	1	Intergenic	novelGene_4638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTAATTTAGA	NA	False	NA	NA	False	NA	NA	NA	84565581	84565406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84565400_84565600
ES.5819.1	chr11	+	208	1	Intergenic	novelGene_4639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTACTACTCATAAGC	NA	False	NA	NA	False	NA	NA	NA	84606019	84606227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84606000_84606200
ES.582.1	chr1	+	5476	16	NIC	ENSMUSG00000026017.14	novel	2763	18	NA	NA	-21	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	2.30554886210541	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTTTTGAAAATTTGC	NA	False	NA	NA	False	ATTAAA	-23	NA	60137384	60193115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60137467_60144469_60144587_60147241_60147360_60148485_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ES.582.2	chr1	+	5187	15	NIC	ENSMUSG00000026017.14	novel	2763	18	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.56284683238284	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAGTTTTTGAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	60137428	60193109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60137467_60141785_60141944_60144469_60144587_60147241_60147360_60148485_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ES.582.3	chr1	+	5389	16	NNC	ENSMUSG00000026017.14	novel	2763	18	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.82528268005561	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTAGTTTTTGAAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	60137432	60193111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60137467_60144469_60144587_60147241_60147325_60148485_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ES.582.4	chr1	+	5412	15	NIC	ENSMUSG00000026017.14	novel	5463	15	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.91460082330045	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAGTTTTTGAAAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	60137432	60193112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60137467_60144469_60144587_60148380_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ES.582.5	chr1	+	5582	17	NIC	ENSMUSG00000026017.14	novel	2763	18	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.04073901379254	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAGTTTTTGAAAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	60137433	60193112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60137467_60141785_60141944_60144469_60144587_60147241_60147360_60148485_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ES.582.6	chr1	+	177	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGTAATACTTAA	NA	False	NA	9	True	NA	NA	NA	60140051	60140228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60140100_60140200
ES.582.7	chr1	+	168	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGGGGGGTGCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	60177278	60177446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60177300_60177400
ES.5820.1	chr11	+	152	1	Intergenic	novelGene_4640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATATAATAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	84696281	84696433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84696300_84696400
ES.5821.1	chr11	+	1541	1	Antisense	novelGene_ENSMUSG00000018405.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGGCTCCAACTTATT	NA	False	NA	7	True	NA	NA	NA	84709643	84711184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_84709600_84711200
ES.5822.1	chr11	+	4877	1	Intergenic	novelGene_4641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84761696	84766573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84761700_84766600
ES.5822.2	chr11	+	2286	1	Intergenic	novelGene_4642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGTTATTAACAAAATGC	NA	False	NA	NA	False	NA	NA	NA	84761722	84764008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84761700_84764000
ES.5823.1	chr11	+	4348	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-265	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	36.2425164689209	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84770708	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.10	chr11	+	5593	22	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-42	-146	intron_retention	FALSE	canonical	3	18	junction_9	31.4701744845205	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAGAACAATGAACAAT	NA	False	NA	NA	False	AATAAA	-17	NA	84770931	84801802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.11	chr11	+	5356	27	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_13	47.9929728583986	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84770989	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772905_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788290_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.12	chr11	+	4363	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	38.8804926451985	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84770991	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.13	chr11	+	6865	22	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	104	junction_1	16.3429792425231	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84770992	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.14	chr11	+	4932	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	35.7543619716532	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84770996	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772593_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.15	chr11	+	4019	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.0513069165031	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCCAACCTTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	84770997	84801943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771399_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.16	chr11	+	5613	23	ISM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	152	113	-10	-9	intron_retention	FALSE	canonical	3	91	junction_6	18.6625093757069	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771125	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.17	chr11	+	4218	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	39.8125599598362	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCAACCTTTTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	84771126	84801945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.18	chr11	+	3718	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	40.6682367707476	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771130	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778904_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.19	chr11	+	5864	22	NNC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	-5	-6	intron_retention	FALSE	canonical	0	0	junction_7	47.4013117301779	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84771130	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785377_84785479_84786093_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.2	chr11	+	4259	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	-265	97	-265	-2	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84770708	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.20	chr11	+	3683	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	32.9606513415922	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771135	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.21	chr11	+	3750	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	31.3266828534579	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTTTTGTTTTTGTTTT	NA	False	NA	20	True	AATAAA	-28	NA	84771137	84801952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.22	chr11	+	3807	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.8870402901764	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771137	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776142_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.23	chr11	+	4502	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	41.1338498076706	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCCAACCTTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	84771138	84801943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787725_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.24	chr11	+	4769	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	4	-9	intron_retention	FALSE	canonical	1	3	junction_20	39.6881725664796	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771139	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84797579_84797698_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.25	chr11	+	5010	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.1183256555015	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACCTTTTGTTTTTGTT	NA	False	NA	18	True	AATAAA	-26	NA	84771139	84801950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772905_84773411_84773554_84776027_84776142_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.27	chr11	+	1666	11	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	7	2850	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	46.9846783536931	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCACTTGGTTTTATCA	NA	False	NA	NA	False	NA	NA	NA	84771142	84786731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303
ES.5823.28	chr11	+	3735	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	11	-9	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	29.4248586443195	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771146	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.29	chr11	+	3945	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.6458593379942	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACCTTTTGTTTTTGTTT	NA	False	NA	19	True	AATAAA	-27	NA	84771149	84801951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778638_84778770_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.3	chr11	+	4673	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-227	-5	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	32.2787856029312	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCCAACCTTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	84770746	84801943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.30	chr11	+	7528	21	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	-9	intron_retention	FALSE	non_canonical	0	0	junction_7	33.9078162080662	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771149	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84786191_84786303_84786382_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.31	chr11	+	4044	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	52.3241315723588	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771149	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791302_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.32	chr11	+	3831	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.2903324912707	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84771149	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.33	chr11	+	3940	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	46.4551396510655	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84771149	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772122_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791302_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.34	chr11	+	3944	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	34.2490599818569	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771150	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787725_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.35	chr11	+	3643	23	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	34.3057472957617	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771150	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.36	chr11	+	3927	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.470900434081	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771150	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784033_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.38	chr11	+	3757	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	44.0334271699732	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771150	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.39	chr11	+	3987	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	19	-5	intron_retention	FALSE	canonical	3	5	junction_11	40.2905248028477	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAGCCAACCTTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	84771154	84801943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798335_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.4	chr11	+	4742	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-223	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1800829186446	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCAACCTTTTGTTTTT	NA	False	NA	15	True	AATAAA	-23	NA	84770750	84801947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772149_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.40	chr11	+	3992	27	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	39.4220262524157	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGTTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-29	NA	84771155	84801953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84771702_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.41	chr11	+	6066	23	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	21	-9	intron_retention	FALSE	canonical	3	104	junction_1	16.3748067933842	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771156	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.42	chr11	+	3844	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	21	-9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	32.3869829818504	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771156	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771387_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.43	chr11	+	3658	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	184	249	-21	-145	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAGAACAATGAACAATG	NA	False	NA	NA	False	AATAAA	-18	NA	84771157	84801803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.44	chr11	+	4629	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-21	-9	intron_retention	FALSE	canonical	3	9	junction_21	30.9471163044546	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771157	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798335_84798462_84799045_84799132_84800079
ES.5823.45	chr11	+	6419	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-17	-10	intron_retention	FALSE	canonical	2	2	junction_23	36.2315072444174	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771161	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800084
ES.5823.46	chr11	+	5095	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	35.0552478239707	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771161	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772905_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.47	chr11	+	3787	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-17	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	49.2582304177575	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84771161	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778904_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.48	chr11	+	5385	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-17	-4	intron_retention	FALSE	canonical	3	29	junction_1	27.7592948380445	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGTTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-29	NA	84771161	84801953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.49	chr11	+	5676	23	NNC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	-13	-9	intron_retention	TRUE	canonical	0	0	junction_6	48.9558959887991	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771165	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84784286_84784586_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791302_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.5	chr11	+	3961	22	NIC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	-221	-3	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	41.5461931806087	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCAACCTTTTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	84770752	84801945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.50	chr11	+	6036	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-8	0	intron_retention	FALSE	canonical	3	11	junction_21	39.6791479571915	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771170	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798066_84798229_84798331_84798462_84799045
ES.5823.51	chr11	+	4385	27	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.9784666774145	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771170	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778638_84778770_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.53	chr11	+	4924	24	NNC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_1	43.4193078583253	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771171	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.54	chr11	+	5128	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	39.0656952379379	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771173	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.56	chr11	+	3551	23	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-4	-9	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	41.0551181617192	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771174	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.57	chr11	+	8438	18	NNC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	11	junction_17	42.2750918509169	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771176	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798066
ES.5823.58	chr11	+	3723	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	48.4586234354134	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771177	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.59	chr11	+	3841	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.5218381964733	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84771180	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776142_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.6	chr11	+	4666	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-177	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	35.8957601953211	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCAACCTTTTGTT	NA	False	NA	12	True	AATAAA	-20	NA	84770796	84801944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772122_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.61	chr11	+	3881	26	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	2	2	junction_12	40.8682566302993	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCAACCTTTTGTTT	NA	False	NA	13	True	AATAAA	-21	NA	84771181	84801945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788290_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.62	chr11	+	3865	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	35.3332930817381	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84771188	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84771702_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.63	chr11	+	4128	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-4	-9	intron_retention	FALSE	canonical	2	3	junction_5	47.0590645418665	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771188	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84771702_84771983_84772080_84773411_84773554_84776027_84776167_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.64	chr11	+	4503	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	29	junction_1	28.3930437000959	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771190	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.65	chr11	+	5684	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	42.5553756886248	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771190	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84797579_84797698_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.66	chr11	+	3612	23	FSM	ENSMUSG00000020527.15	ENSMUST00000124152.8	3644	23	14	18	0	-9	multi-exon	FALSE	canonical	3	18	junction_8	38.7069942640691	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771192	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.67	chr11	+	3916	23	NNC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	50.8272271995373	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84771192	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798335_84798462_84799045_84799132_84800079_84800685_84801218
ES.5823.68	chr11	+	3817	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.5254290538669	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771192	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84772846_84772905_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.7	chr11	+	4675	27	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-159	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.4319155308985	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84770814	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772080_84772846_84772905_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.70	chr11	+	3502	24	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	46.9532204958705	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771193	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771387_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798066_84798229_84798331_84798462_84799045_84799132_84801218
ES.5823.71	chr11	+	4170	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	49.0576298007422	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84771194	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84771615_84772122_84773411_84773554_84776027_84776167_84776496_84776646_84778904_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.72	chr11	+	4745	23	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	15	-9	intron_retention	FALSE	canonical	1	4	junction_1	32.649180820726	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84771207	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771387_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.74	chr11	+	10009	18	NIC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	-649	0	intron_retention	FALSE	canonical	3	113	junction_3	13.9117336151872	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84772762	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84785479_84786093_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.75	chr11	+	3186	22	NNC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	54	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	47.5427483973115	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCAACCTTTTGTTTT	NA	False	NA	14	True	AATAAA	-22	NA	84773465	84801946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798335_84798462_84799045_84799132_84801218
ES.5823.76	chr11	+	8656	17	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	3968	-95	intron_retention	FALSE	canonical	3	120	junction_10	11.7891634563272	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTATGTTTTTAATTCA	NA	False	NA	-79	True	AATGAA	-36	NA	84777379	84801853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84778994_84782901_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.77	chr11	+	4656	21	ISM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	6437	110	3999	-6	3prime_fragment	FALSE	canonical	3	91	junction_2	18.4224726896256	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84777410	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.78	chr11	+	158	1	Intergenic	novelGene_4643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATCTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	84779843	84780001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84779800_84780000
ES.5823.79	chr11	+	5404	20	NNC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	9488	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	52.589351481043	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCCAACCTTTTGTT	NA	False	NA	12	True	AATAAA	-20	NA	84782899	84801944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84784774_84784822_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788290_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.8	chr11	+	6121	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-69	-9	intron_retention	FALSE	canonical	3	91	junction_5	18.5845027620099	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84770904	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.80	chr11	+	3927	19	ISM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	11926	97	9488	-2	intron_retention	FALSE	canonical	3	91	junction_1	16.8522995463527	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTTTGTTTTAAG	NA	False	NA	23	True	AATAAA	-31	NA	84782899	84801955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.81	chr11	+	3427	19	ISM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	12700	100	10262	4	3prime_fragment	FALSE	canonical	3	108	junction_1	15.2602930250332	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTTTTGTTTTTGTTTT	NA	False	NA	20	True	AATAAA	-28	NA	84783673	84801952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.82	chr11	+	3122	16	NIC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	11549	-4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	37.3478543188524	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGTTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-29	NA	84784960	84801953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84785479_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.83	chr11	+	3992	17	ISM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	14119	110	11681	-6	intron_retention	FALSE	canonical	3	120	junction_9	11.3974709365718	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGCCAACCTTTTG	NA	False	NA	10	True	AATAAA	-18	NA	84785092	84801942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.84	chr11	+	4528	14	NNC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	11911	-9	intron_retention	FALSE	canonical	1	4	junction_1	49.5407309561399	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84785322	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84785479_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798066_84798229_84798331_84798462_84799045
ES.5823.85	chr11	+	6378	12	ISM	ENSMUSG00000020527.15	ENSMUST00000124152.8	3644	23	15351	18	13118	-9	intron_retention	FALSE	canonical	3	120	junction_6	11.7922793063796	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84786529	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331
ES.5823.86	chr11	+	5630	12	NIC	ENSMUSG00000020527.15	novel	5360	22	NA	NA	14267	0	intron_retention	FALSE	canonical	3	125	junction_2	9.43704674353526	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAACCTTTTGTTTTTG	NA	False	NA	16	True	AATAAA	-24	NA	84787678	84801948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84792330_84792925_84793034_84793982_84794054_84796365_84798229_84798331_84798462_84799045_84799132_84800079
ES.5823.87	chr11	+	2997	15	NIC	ENSMUSG00000020527.15	novel	3651	24	NA	NA	14317	-10	intron_retention	FALSE	canonical	3	5	junction_1	38.4129017441818	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATAAATAGCCAACCT	NA	False	NA	6	True	AATAAA	-14	NA	84787728	84801938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84788038_84788184_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.89	chr11	+	4369	9	NIC	ENSMUSG00000020527.15	novel	3644	23	NA	NA	17627	-4	intron_retention	FALSE	canonical	3	141	junction_8	5.78251675311019	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGTTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-29	NA	84791038	84801953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_84791144_84791299_84791414_84791667_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045
ES.5823.9	chr11	+	4062	25	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	-54	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_11	50.9888161757066	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84770919	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788184_84788290_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798066_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ES.5823.91	chr11	+	3447	3	ISM	ENSMUSG00000020527.15	ENSMUST00000141173.2	3651	24	24395	8	24395	-8	intron_retention	FALSE	canonical	3	141	junction_2	9	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAAATAGCCAACCTTT	NA	False	NA	8	True	AATAAA	-16	NA	84797806	84801940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84798229_84798331_84798462_84799045
ES.5823.92	chr11	+	3819	2	ISM	ENSMUSG00000020527.15	ENSMUST00000141173.2	3651	24	24620	-5	24620	-4	intron_retention	FALSE	canonical	3	159	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTGTTTTTGTTTTA	NA	False	NA	21	True	AATAAA	-29	NA	84798031	84801953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84798229_84798331
ES.5823.93	chr11	+	1308	3	ISM	ENSMUSG00000020527.15	ENSMUST00000141173.2	3651	24	25433	9	25433	-9	3prime_fragment	FALSE	canonical	3	131	junction_1	21	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAATAGCCAACCTT	NA	False	NA	7	True	AATAAA	-15	NA	84798844	84801939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_84799132_84800079_84800380_84801218
ES.5823.94	chr11	+	2042	1	Genic_Genomic	ENSMUSG00000020527.15	novel	NA	NA	NA	NA	27274	675	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	84800685	84802727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_84800700_84802700
ES.5824.1	chr11	-	5843	9	Fusion	ENSMUSG00000034449.8_ENSMUSG00000018405.8	novel	1254	7	NA	NA	-15	73	intron_retention	FALSE	canonical	0	0	junction_4	34.123855292156	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATAGTAGTAACGTGT	NA	False	NA	69	True	NA	NA	NA	84719835	84703813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662_84712295_84712490_84713267_84713897_84713993_84716193_84716404_84719576
ES.5824.10	chr11	-	2435	6	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.0935125540224	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCCCTGGAGTTGATT	NA	False	NA	-7	True	AATAAA	-20	NA	84710340	84703889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84704950_84704987_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ES.5824.100	chr11	-	1707	8	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	-4	557	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	261.018569986028	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTTTGTATATACTA	NA	False	NA	6	True	ATTAAA	-22	NA	84761555	84742650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.101	chr11	-	1634	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	1	551	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	227.551215236385	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	84761614	84742656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.102	chr11	-	1591	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	0	550	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	233.834461864704	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTGTTTTGTTTGTA	NA	False	NA	-1	True	ATTAAA	-15	NA	84761605	84742657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.103	chr11	-	1526	7	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	54	550	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_6	234.574378159442	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTGTTTTGTTTGTA	NA	False	NA	-1	True	ATTAAA	-15	NA	84761263	84742657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761186
ES.5824.104	chr11	-	5050	2	ISM	ENSMUSG00000020530.15	ENSMUST00000134043.2	324	3	96	-550	96	550	3prime_fragment	FALSE	canonical	3	79	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTGTTTTGTTTGTA	NA	False	NA	-1	True	ATTAAA	-15	NA	84749224	84742657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84743363_84744879
ES.5824.105	chr11	-	3355	1	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	3308	550	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTGTTTTGTTTGTA	NA	False	NA	-1	True	ATTAAA	-15	NA	84746012	84742657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84742700_84746000
ES.5824.106	chr11	-	1565	7	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	-1	549	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	230.663354985861	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTGTTTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-14	NA	84761616	84742658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
ES.5824.108	chr11	-	1436	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	4	399	combination_of_known_junctions	FALSE	canonical	3	41	junction_6	233.834461864704	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATATTTTGGCTTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	84761601	84742808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.109	chr11	-	1153	7	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	1	139	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	230.663354985861	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	84761614	84743068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
ES.5824.11	chr11	-	3822	15	Fusion	ENSMUSG00000018405.8_ENSMUSG00000020530.15	novel	557	6	NA	NA	5	-3	multi-exon	FALSE	canonical	0	0	junction_3	189.222738850169	621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCCCTGGAGTTGATT	NA	False	NA	-7	True	AATAAA	-20	NA	84761023	84703889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_84705338_84705514_84705635_84705733_84705867_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.110	chr11	-	1251	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	0	139	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	227.551215236385	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	84761643	84743068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.111	chr11	-	985	6	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	1	2799	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	259.977999069152	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCTCAGTGTCATTGG	NA	False	NA	-21	True	AATAAA	-24	NA	84761614	84748745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84748950_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.113	chr11	-	1040	6	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	-9	2783	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	253.787785364071	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGTCCTGAGTTAAAT	NA	False	NA	-37	True	AATAAA	-8	NA	84761652	84748761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84748950_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.114	chr11	-	782	6	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	24	2640	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	260.709493498031	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGATGTGTATTTGTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	84761293	84748904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84748950_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761186
ES.5824.115	chr11	-	179	2	Antisense	novelGene_ENSMUSG00002075861.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACT	7226	False	NA	NA	False	NA	NA	NA	84833145	84752347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_84752381_84832999
ES.5824.116	chr11	-	337	1	Genic_Genomic	ENSMUSG00000045140.9	novel	NA	NA	NA	NA	3546	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTCTGCATGTATT	NA	False	NA	8	True	TTTAAA	-17	NA	84767475	84767138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_84767100_84767500
ES.5824.117	chr11	-	1798	2	FSM	ENSMUSG00000045140.9	ENSMUST00000067058.3	2675	2	356	521	356	7	multi-exon	FALSE	canonical	3	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCATGGATGTTTAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	84770665	84767661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84769339_84770544
ES.5824.118	chr11	-	992	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	1	5	1	-5	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTATTGTTCCCTTAG	NA	False	NA	64	True	AATAAA	-11	NA	84807191	84801780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ES.5824.120	chr11	-	4004	2	NIC	ENSMUSG00000020526.13	novel	998	5	NA	NA	372	-72	intron_retention	FALSE	canonical	3	360	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTGTGGTTCTCTTGAT	NA	False	NA	-3	True	ATTAAA	-18	NA	84806759	84801847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84804129_84805036
ES.5824.121	chr11	-	883	4	NNC	ENSMUSG00000020526.13	novel	998	5	NA	NA	3	-79	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	172.111075245674	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTAAGGTGTGGTTC	NA	False	NA	-10	True	ATTAAA	-11	NA	84807172	84801854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84802475_84804047_84804129_84805036_84805128_84807081
ES.5824.122	chr11	-	781	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	20	197	3	144	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACAAAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	84807172	84801972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ES.5824.123	chr11	-	1690	4	NIC	ENSMUSG00000020526.13	novel	998	5	NA	NA	2	144	intron_retention	FALSE	canonical	3	370	junction_1	21.1712593442672	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACAAAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	84807173	84801972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84802475_84804047_84805112_84806924_84806957_84807081
ES.5824.124	chr11	-	3153	4	NNC	ENSMUSG00000020526.13	novel	998	5	NA	NA	-6	144	intron_retention	TRUE	non_canonical	0	0	junction_2	186.764260202237	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACAAAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	84807181	84801972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84802475_84804047_84806083_84806440_84806957_84807081
ES.5824.125	chr11	-	879	5	FSM	ENSMUSG00000020526.13	ENSMUST00000144552.8	738	5	3	-144	3	144	multi-exon	FALSE	canonical	2	2	junction_3	166.285146660789	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAAACAAAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	84807172	84801972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84802475_84804047_84804129_84805036_84805210_84806924_84806957_84807081
ES.5824.126	chr11	-	180	1	Intergenic	novelGene_4644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGTTT	7223	False	NA	NA	False	NA	NA	NA	84833148	84832968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84833000_84833100
ES.5824.13	chr11	-	1829	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	-5	653	-5	-653	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCGACTAGGCTTGCCCC	NA	False	NA	NA	False	NA	NA	NA	84710346	84704539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ES.5824.14	chr11	-	5083	1	Genic_Genomic	ENSMUSG00000034449.8	novel	NA	NA	NA	NA	3823	797	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAGGAATCA	NA	False	NA	NA	False	NA	NA	NA	84715967	84710884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_84710900_84716000
ES.5824.15	chr11	-	892	5	NNC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-44	140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.3246274380513	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTATCTTTCAGTTTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	84719864	84711541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713239_84719819
ES.5824.16	chr11	-	1390	7	NNC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-41	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.8397427279183	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAGAAGTATCTTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	84719861	84711547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84712128_84712228_84712295_84712490_84712571_84713136_84713267_84713897_84713993_84716193_84716348_84719576
ES.5824.17	chr11	-	1402	7	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-45	129	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	15.7585955380971	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719865	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
ES.5824.18	chr11	-	1467	6	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-9	129	intron_retention	FALSE	canonical	3	14	junction_5	16.9186287860453	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719829	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
ES.5824.19	chr11	-	1307	6	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-24	129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.5264289224901	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719844	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713897_84713993_84716193_84716404_84719576
ES.5824.20	chr11	-	1553	6	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-39	129	intron_retention	FALSE	canonical	3	39	junction_5	7.7614431647729	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719859	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
ES.5824.21	chr11	-	2937	3	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-43	129	intron_retention	FALSE	canonical	3	39	junction_2	8.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719863	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84713993_84716193_84716404_84719576
ES.5824.22	chr11	-	1454	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	-71	-129	-41	129	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719861	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
ES.5824.23	chr11	-	1257	6	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-30	129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	25.3266657892428	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719850	84711552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713897_84713993_84716193_84716348_84719576
ES.5824.24	chr11	-	2608	5	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-12	128	intron_retention	FALSE	canonical	3	39	junction_4	8.5146931829632	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTACCTTCAGAAGTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	84719832	84711553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712128_84712228_84712295_84712490_84713993_84716193_84716404_84719576
ES.5824.25	chr11	-	2553	5	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	-14	127	intron_retention	FALSE	canonical	3	14	junction_4	19.0967929244677	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTCTACCTTCAGAAGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	84719834	84711554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84712128_84712228_84712295_84712490_84713993_84716193_84716348_84719576
ES.5824.26	chr11	-	2512	1	Genic_Genomic	ENSMUSG00000034449.8	novel	NA	NA	NA	NA	-18	-4509	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGGAAAGAATTTATTT	NA	False	NA	NA	False	NA	NA	NA	84719838	84717326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_84717300_84719800
ES.5824.27	chr11	-	3721	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	24	-711	14	711	multi-exon	FALSE	canonical	3	67	junction_13	134.623999724325	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTTGTTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	84761591	84722475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.28	chr11	-	3694	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	-11	-1155	-11	710	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	84761039	84722476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.29	chr11	-	3406	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	157	710	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	160.726090082033	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	84760871	84722476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.3	chr11	-	6062	4	NIC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	-28	-2	intron_retention	FALSE	canonical	0	0	junction_3	45.7990781081405	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	False	NA	-6	True	AATAAA	-21	NA	84710369	84703888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84705338_84705514_84705635_84705733_84709520_84709662
ES.5824.30	chr11	-	3414	12	NIC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	155	710	combination_of_known_splicesites	FALSE	canonical	1	14	junction_8	162.591004396749	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTTTTTGTTGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	84760873	84722476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.32	chr11	-	3641	14	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	48	709	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_13	141.077090847983	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTTTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-11	NA	84761269	84722477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761186
ES.5824.34	chr11	-	3661	14	NNC	ENSMUSG00000020530.15	novel	3034	14	NA	NA	-2	704	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_13	137.500511026484	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTATTTTTGGTTTTTG	NA	False	NA	NA	False	AATAAA	-6	NA	84761607	84722482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
ES.5824.35	chr11	-	3008	14	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	144.390291269939	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTCTTCCTTCCTCAT	NA	False	NA	1	True	AATAAA	-17	NA	84761627	84723185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.37	chr11	-	2137	9	NNC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	-6944	0	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_8	162.027003922186	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84735754	84723186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84735716
ES.5824.38	chr11	-	3070	15	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	203.856892581686	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761616	84723186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761515
ES.5824.39	chr11	-	2627	12	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	-1659	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.160604638147	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84753144	84723186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725186_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063
ES.5824.4	chr11	-	2434	5	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.6749422187639	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	False	NA	-6	True	AATAAA	-21	NA	84710304	84703888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84705338_84705514_84705631_84705733_84705867_84709425_84709520_84709662
ES.5824.40	chr11	-	2840	13	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_11	182.602996050631	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761258	84723186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84760702_84760899_84761186
ES.5824.41	chr11	-	4108	12	NIC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	-14	0	intron_retention	FALSE	canonical	3	231	junction_6	91.1215698716158	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761042	84723186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.43	chr11	-	4070	13	NIC	ENSMUSG00000020530.15	novel	3034	14	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	41	junction_12	146.123140611685	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTAGCCTCTTCCTTCCTC	NA	False	NA	-1	True	AATAAA	-15	NA	84761616	84723187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761515
ES.5824.44	chr11	-	2929	14	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_13	141.077090847983	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTAGCCTCTTCCTTCCTC	NA	False	NA	-1	True	AATAAA	-15	NA	84761267	84723187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761186
ES.5824.45	chr11	-	3118	14	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	184.838326925429	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTAGCCTCTTCCTTCCT	NA	False	NA	-2	True	AATAAA	-14	NA	84761043	84723188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.46	chr11	-	2996	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	56	4	18	-4	multi-exon	FALSE	canonical	3	67	junction_13	138.817874810357	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTAGCCTCTTCCTTC	NA	False	NA	-4	True	AATAAA	-12	NA	84761587	84723190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.47	chr11	-	2923	14	NIC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	2	-8	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	144.390291269939	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTAGCCTCTTC	NA	False	NA	-8	True	AATAAA	-8	NA	84761603	84723194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761515
ES.5824.48	chr11	-	2956	13	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	155.757000021044	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTAGCCTCTTC	NA	False	NA	-8	True	AATAAA	-8	NA	84761043	84723194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727310_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.5	chr11	-	2151	5	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	41.1035278291292	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	False	NA	-6	True	AATAAA	-21	NA	84710330	84703888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709975
ES.5824.51	chr11	-	2764	13	NNC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	-16	-217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	157.771701271876	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGGTGTACATGTTT	NA	False	NA	-2	True	AATAAA	-24	NA	84761044	84723403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751617_84753063_84753145_84760702
ES.5824.52	chr11	-	2813	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	4	217	4	-217	multi-exon	FALSE	canonical	3	67	junction_13	134.623999724325	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGGTGTACATGTTT	NA	False	NA	-2	True	AATAAA	-24	NA	84761611	84723403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.55	chr11	-	3045	18	Fusion	ENSMUSG00000020530.15_ENSMUSG00000045140.9	novel	2478	15	NA	NA	-15	-220	multi-exon	FALSE	canonical	0	0	junction_16	226.36170033193	486	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAATGTGGTGTACATG	NA	False	NA	-5	True	AATAAA	-21	NA	84771126	84723406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84762094_84762153_84764614_84764659_84766983_84767085_84769192_84769339_84771053
ES.5824.56	chr11	-	6822	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	209	-220	intron_retention	FALSE	canonical	3	268	junction_7	82.3684525984984	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAATGTGGTGTACATG	NA	False	NA	-5	True	AATAAA	-21	NA	84760819	84723406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.59	chr11	-	3900	13	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	1	-221	intron_retention	FALSE	canonical	3	41	junction_12	146.123140611685	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761614	84723407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.60	chr11	-	3896	13	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	-1	-221	intron_retention	FALSE	canonical	3	41	junction_12	150.259289784914	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761616	84723407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.62	chr11	-	2568	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	63	-222	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	160.726090082033	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84760965	84723408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.69	chr11	-	3917	13	NIC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	0	-222	intron_retention	FALSE	canonical	3	67	junction_12	144.468830740598	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84761605	84723408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.7	chr11	-	2177	4	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.7990781081405	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	False	NA	-6	True	AATAAA	-21	NA	84710313	84703888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84705338_84705514_84705635_84705733_84705867_84709838
ES.5824.70	chr11	-	2890	15	FSM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	-134	-278	-1	-222	multi-exon	FALSE	canonical	3	10	junction_9	203.856892581686	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84761606	84723408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.71	chr11	-	2585	13	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	159	-222	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	147.856043915094	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84760869	84723408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749348_84751366_84751625_84753063_84753145_84760702
ES.5824.72	chr11	-	5728	7	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	3498	-222	intron_retention	FALSE	canonical	3	268	junction_5	81.7876654650456	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGAATGTGGTGTACA	NA	False	NA	-7	True	AATAAA	-19	NA	84745822	84723408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879
ES.5824.73	chr11	-	3790	11	NIC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	0	222	intron_retention	FALSE	canonical	1	9	junction_10	164.784252888436	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTAGAATGTGGTGTAC	NA	False	NA	-8	True	AATAAA	-18	NA	84761028	84723409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84760702
ES.5824.74	chr11	-	3767	13	NNC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	17	222	intron_retention	FALSE	canonical	1	11	junction_12	157.083908044926	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTAGAATGTGGTGTAC	NA	False	NA	-8	True	AATAAA	-18	NA	84761300	84723409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761274
ES.5824.76	chr11	-	2241	13	NNC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	129	216	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	154.371013218875	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACGCATAGTAGAATGTG	NA	False	NA	-14	True	AATAAA	-12	NA	84760899	84723415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84723660_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.8	chr11	-	2260	5	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	42.807709586008	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCCCTGGAGTTGATT	NA	False	NA	-7	True	AATAAA	-20	NA	84710303	84703889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709838
ES.5824.81	chr11	-	2353	14	NNC	ENSMUSG00000020530.15	novel	3034	14	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_13	137.500511026484	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACTACTGCGCCTTC	NA	False	NA	NA	False	AATAAA	-32	NA	84761616	84723799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
ES.5824.82	chr11	-	2381	14	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	144.390291269939	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACTACTGCGCCTTC	NA	False	NA	NA	False	AATAAA	-32	NA	84761614	84723799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ES.5824.83	chr11	-	4292	8	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	2762	-2	intron_retention	FALSE	canonical	3	268	junction_6	76.9614268610568	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACTACTGCGCCTTC	NA	False	NA	NA	False	AATAAA	-32	NA	84746558	84723799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879
ES.5824.84	chr11	-	2455	15	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	203.856892581686	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACTACTGCGCCTTC	NA	False	NA	NA	False	AATAAA	-32	NA	84761614	84723799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761515
ES.5824.86	chr11	-	3359	12	NIC	ENSMUSG00000020530.15	novel	2950	14	NA	NA	123	-7	intron_retention	FALSE	canonical	3	268	junction_6	81.9556421042949	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAAGATGACTACTGCG	NA	False	NA	NA	False	AATAAA	-27	NA	84760905	84723804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.88	chr11	-	2222	13	NNC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	124	-10	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	157.722594027193	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTCAAGATGACTACT	NA	False	NA	NA	False	AATAAA	-24	NA	84760904	84723807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84724040_84725160_84725410_84727190_84727334_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.89	chr11	-	2418	14	NIC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	62	-14	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	184.838326925429	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAACACTCAAGATGAC	NA	False	NA	NA	False	AATAAA	-20	NA	84760966	84723811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.90	chr11	-	2245	14	NIC	ENSMUSG00000020530.15	novel	3056	14	NA	NA	0	-16	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	146.128216376242	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATGAAACACTCAAGATG	NA	False	NA	NA	False	AATAAA	-18	NA	84761317	84723813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761288
ES.5824.91	chr11	-	4319	11	NIC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	26	245	intron_retention	FALSE	canonical	3	231	junction_5	95.5680385903153	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCATTCCAAGATAATT	NA	False	NA	NA	False	AATAAA	-18	NA	84761002	84724716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.92	chr11	-	2437	12	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	665	1534	129	241	internal_fragment	FALSE	canonical	3	268	junction_6	81.9556421042949	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCTTGCATTCCAAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	84760899	84724720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.93	chr11	-	1828	12	NNC	ENSMUSG00000020530.15	novel	3034	14	NA	NA	-1	30	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_11	149.082538567684	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTGAAATGCGAT	NA	False	NA	NA	False	NA	NA	NA	84761606	84727216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761499
ES.5824.94	chr11	-	1902	12	ISM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	4	4030	4	30	5prime_fragment	FALSE	canonical	3	67	junction_11	145.975091274941	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTGAAATGCGAT	NA	False	NA	NA	False	NA	NA	NA	84761611	84727216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ES.5824.95	chr11	-	1861	11	ISM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	-16	3585	-16	30	5prime_fragment	FALSE	canonical	3	231	junction_5	95.5680385903153	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTGAAATGCGAT	NA	False	NA	NA	False	NA	NA	NA	84761044	84727216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.97	chr11	-	3863	12	NNC	ENSMUSG00000020530.15	novel	2478	15	NA	NA	-19	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	203.013210497159	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATAACATAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	84761047	84727261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84745080_84746355_84748501_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.98	chr11	-	3679	6	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	-16	3395	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	222.170565107082	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGAGCTATGATTAACTC	NA	False	NA	NA	False	NA	NA	NA	84761044	84739812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84742602_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5824.99	chr11	-	4242	6	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	172	3385	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	192.335748107314	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAATAAACTCAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	84760856	84739822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ES.5825.1	chr11	+	173	1	Intergenic	novelGene_4645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	84866540	84866713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84866500_84866700
ES.5826.1	chr11	+	174	1	Intergenic	novelGene_4646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGATACTGGCT	NA	False	NA	NA	False	NA	NA	NA	84867928	84868102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84867900_84868100
ES.5827.1	chr11	+	156	1	Intergenic	novelGene_4647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	84894777	84894933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84894800_84894900
ES.5828.1	chr11	+	146	1	Intergenic	novelGene_4650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAGACC	1227	False	NA	NA	False	NA	NA	NA	84946144	84946290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84946100_84946300
ES.5829.1	chr11	+	359	1	Intergenic	novelGene_4652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATTTAAAAAACT	9271	False	NA	NA	False	NA	NA	NA	84967097	84967456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84967100_84967500
ES.583.1	chr1	-	7181	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	15	-2622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	406.948188842716	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAAGTAATACACATTA	NA	False	NA	NA	False	AGTAAA	-14	NA	60137052	60111565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60113777_60113970_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126356_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136661
ES.583.10	chr1	-	2212	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	2	7798	2	-715	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTAGTTTGACTT	NA	False	NA	78	True	AGTAAA	-22	NA	60137065	60116741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.12	chr1	-	1953	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	828	-29	-828	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTGTCTACATTTTAC	NA	False	NA	-35	True	TATAAA	-21	NA	60137334	60116854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.14	chr1	-	3142	12	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	9	-883	intron_retention	FALSE	canonical	3	863	junction_11	59.0720249545536	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTACTGTCTTTGTC	NA	False	NA	-90	True	TTTAAA	-32	NA	60137058	60116909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.15	chr1	-	1673	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	402	1176	-97	-1176	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTGCCTAAAATGTGC	NA	False	NA	0	True	NA	NA	NA	60137402	60117202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.17	chr1	-	3762	10	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	-32	-1275	intron_retention	FALSE	canonical	0	0	junction_7	304.625493611458	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60136888	60117301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60123000_60124869_60126360_60127199_60127316_60130178_60130274_60133590_60133686_60136665
ES.583.18	chr1	-	2881	12	NNC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	28	-1276	intron_retention	FALSE	canonical	0	0	junction_9	369.988228537339	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137039	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60127316_60128040_60128115_60130178_60130274_60133590_60133686_60136665
ES.583.19	chr1	-	3986	12	NIC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	16	-1276	intron_retention	FALSE	canonical	3	21	junction_11	275.845507126096	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137268	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60123000_60124869_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137148
ES.583.20	chr1	-	3310	12	NNC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	2	-1276	intron_retention	FALSE	canonical	1	4	junction_8	277.380753918919	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137065	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60127316_60128040_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.21	chr1	-	2950	12	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	-8	-1276	intron_retention	FALSE	canonical	3	863	junction_11	58.1320810136297	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137075	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.23	chr1	-	1497	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	-38	-1276	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	256.937724133379	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137105	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137080
ES.583.24	chr1	-	1673	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	0	-1276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	260.324490274516	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137305	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137104
ES.583.25	chr1	-	2741	12	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	7	-1276	intron_retention	FALSE	canonical	3	863	junction_11	53.7879214681862	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137060	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.26	chr1	-	1495	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	-5	-1276	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_13	257.719103084491	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137072	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137049
ES.583.27	chr1	-	1568	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	6	1276	-5	-1276	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137299	60117302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
ES.583.28	chr1	-	4272	11	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	2	-1277	intron_retention	FALSE	canonical	3	863	junction_10	55.7314991723711	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCCTTGTTGGGTCTTG	NA	False	NA	-24	True	AATGAA	-13	NA	60137303	60117303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.29	chr1	-	3940	12	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	-12	-1278	intron_retention	FALSE	canonical	3	863	junction_11	58.2425819062603	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCCTTGTTGGGTCTT	NA	False	NA	-25	True	AATGAA	-12	NA	60137079	60117304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.3	chr1	-	4659	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	-1878	-29	1878	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTGGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	60137334	60114148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.30	chr1	-	1395	13	NNC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	36	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	270.659213259446	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCCTTGTTGGGTCTT	NA	False	NA	-25	True	AATGAA	-12	NA	60136820	60117304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60122991_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.31	chr1	-	4818	11	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	-8	-1278	intron_retention	FALSE	canonical	3	863	junction_10	59.8889806224818	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTCCTTGTTGGGTCTT	NA	False	NA	-25	True	AATGAA	-12	NA	60137075	60117304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.33	chr1	-	1498	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	470	1283	-29	-1283	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGACTTCCTTGTTGG	NA	False	NA	-30	True	AATGAA	-7	NA	60137334	60117309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.34	chr1	-	1531	12	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	8	-1283	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	277.900838489303	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGACTTCCTTGTTGG	NA	False	NA	-30	True	AATGAA	-7	NA	60137059	60117309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60130178_60130274_60133590_60133686_60136665
ES.583.35	chr1	-	1700	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	15	-1284	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	399.433548620185	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGAGACTTCCTTGTTG	NA	False	NA	-31	True	AATGAA	-6	NA	60137052	60117310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126356_60127199_60127316_60128040_60128115_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.36	chr1	-	2587	13	ISM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	480	2461	-19	-2461	5prime_fragment	FALSE	canonical	3	160	junction_12	227.56871672823	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATGTGCATGTTGTC	NA	False	NA	NA	False	AATAAA	-22	NA	60137324	60118487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.37	chr1	-	4082	10	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	8	2367	intron_retention	FALSE	canonical	3	863	junction_9	51.7002280483066	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGAGCGTTTGTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	60137059	60119876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.38	chr1	-	3082	6	NIC	ENSMUSG00000026019.16	novel	10012	13	NA	NA	8	-1131	intron_retention	FALSE	canonical	3	863	junction_5	58.6023890297998	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAGATTAAAAACACAGT	NA	False	NA	NA	False	NA	NA	NA	60137059	60124084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.4	chr1	-	2669	6	ISM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	14333	-783	1949	783	3prime_fragment	FALSE	canonical	3	924	junction_1	48.5361720781522	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGGCTTAGGCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	60122972	60115243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913
ES.583.6	chr1	-	2789	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	428	34	-71	-34	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACGCAATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60137376	60116060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ES.583.8	chr1	-	2755	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	-5	7262	-5	-179	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTGTCCATTCATTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	60137072	60116205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.583.9	chr1	-	2396	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	206	7410	-5	-327	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTTATAAAAGTATGGG	NA	False	NA	NA	False	AATAAA	-14	NA	60136861	60116353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ES.5830.1	chr11	+	151	1	Intergenic	novelGene_4653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	84976139	84976290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84976100_84976300
ES.5831.1	chr11	+	185	1	Intergenic	novelGene_4654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTCACAT	NA	False	NA	NA	False	NA	NA	NA	84988781	84988966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_84988800_84989000
ES.5832.1	chr11	-	6059	27	NNC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	17.8379042603767	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTGATCCTGTTTTA	7364	False	NA	-8	True	AGTAAA	-28	NA	85030985	84875261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030928
ES.5832.10	chr11	-	6839	34	NNC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	16.69050636604	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTTCTCTTTGTGAT	7566	False	NA	-17	True	AGTAAA	-19	NA	85030783	84875270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84922944_84927347_84927466_84930026_84930168_84930820_84930973_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.11	chr11	-	7021	34	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	6	junction_18	13.9856281998075	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTTTCTCTTTGTGAT	7556	False	NA	-17	True	AGTAAA	-19	NA	85030793	84875270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927305_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.12	chr11	-	6852	17	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	-3426	-46	intron_retention	FALSE	canonical	3	40	junction_16	9.90265116016918	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTTTCCTTGTACAA	NA	False	NA	-6	True	ATTAAA	-17	NA	84923387	84875313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894
ES.5832.15	chr11	-	9202	33	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	11	-49	intron_retention	FALSE	canonical	3	28	junction_25	12.004556426624	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGGTTTTTCCTTGTA	7566	False	NA	-9	True	ATTAAA	-14	NA	85030783	84875316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.16	chr11	-	6898	34	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	16	-111	combination_of_known_splicesites	FALSE	canonical	3	6	junction_18	13.9856281998075	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCGTGTACCTGTTT	7571	False	NA	-71	True	TATAAA	-15	NA	85030778	84875378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927305_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.17	chr11	-	6122	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	164	767	55	438	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTCCCTGTGTTGTG	7649	False	NA	NA	False	TATAAA	-19	NA	85030700	84876034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.18	chr11	-	5166	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	85	1802	15	26	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTTTGTTTTGAAGT	7570	False	NA	NA	False	AATAAA	-36	NA	85030779	84877069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.19	chr11	-	4144	25	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	17.4523159876657	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAACTTTAAGAATAGTAA	7594	False	NA	NA	False	AATAAA	-19	NA	85030755	84877086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84994724_84994853_85030536
ES.5832.2	chr11	-	7082	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	-24	-5	-24	5	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTGATCCTGTTTT	7461	False	NA	-9	True	AGTAAA	-27	NA	85030888	84875262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.20	chr11	-	5055	33	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	15	8	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	13.7277874560142	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAACTTTAAGAATAGTA	7570	False	NA	NA	False	AATAAA	-18	NA	85030779	84877087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.21	chr11	-	4039	8	ISM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	118501	3137	7598	-1309	internal_fragment	FALSE	canonical	3	55	junction_7	5.76760835376753	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGCCAACCTAGACTA	3991	False	NA	NA	False	NA	NA	NA	84912363	84878404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590
ES.5832.22	chr11	-	165	1	Intergenic	novelGene_4648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGAGGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	84903699	84903534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84903500_84903700
ES.5832.23	chr11	-	3507	26	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	-16	9570	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	12.2163169572502	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCATTGGTGAAATGCA	7578	False	NA	NA	False	AATATA	-26	NA	85030771	84908416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927305_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ES.5832.24	chr11	-	173	1	Intergenic	novelGene_4649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAATAAAGGT	1219	False	NA	NA	False	NA	NA	NA	84915135	84914962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84915000_84915100
ES.5832.25	chr11	-	1853	1	NIC	ENSMUSG00000000804.15	novel	772	8	NA	NA	4714	3016	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCACTAAAAACATATTA	NA	False	NA	NA	False	AAGAAA	-6	NA	84926150	84924297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84924300_84926200
ES.5832.26	chr11	-	178	1	Intergenic	novelGene_4651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTAAGTCTGA	NA	False	NA	NA	False	NA	NA	NA	84960181	84960003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84960000_84960200
ES.5832.27	chr11	-	2901	2	FSM	ENSMUSG00000000804.15	ENSMUST00000174809.2	566	2	-33	-2302	6	-1154	multi-exon	FALSE	canonical	3	44	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTGAAAGGAAGAAAGAAAAA	7561	False	NA	NA	False	NA	NA	NA	85030788	84992203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_84994853_85030536
ES.5832.28	chr11	-	184	1	Intergenic	novelGene_4655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGAGTTTTTATCTA	NA	False	NA	NA	False	NA	NA	NA	84999887	84999703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_84999700_84999900
ES.5832.29	chr11	-	174	1	Intergenic	novelGene_4656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAGTGGAAGGT	NA	False	NA	NA	False	NA	NA	NA	85016114	85015940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85015900_85016100
ES.5832.3	chr11	-	5063	19	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	719	3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	15.3123850461797	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTTTGTGATCCTGTT	NA	False	NA	-11	True	AGTAAA	-25	NA	84930145	84875264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_84877410_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026
ES.5832.5	chr11	-	4138	13	NNC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	3536	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.6835860821441	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTCTTTGTGATCCTG	NA	False	NA	-13	True	AGTAAA	-23	NA	84916425	84875266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883439_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344
ES.5832.7	chr11	-	4577	16	NNC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	2010	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	26.938118386818	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTCTCTTTGTGATCC	NA	False	NA	-15	True	AGTAAA	-21	NA	84917951	84875268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_84877410_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84909215_84909288_84909388_84909498_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926
ES.5833.1	chr11	+	197	1	Intergenic	novelGene_4657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTAAGCTCCATGAATGT	NA	False	NA	NA	False	NA	NA	NA	85056601	85056798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85056600_85056800
ES.5834.1	chr11	+	179	1	Intergenic	novelGene_4662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAACATTA	NA	False	NA	NA	False	NA	NA	NA	85084207	85084386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85084200_85084400
ES.5835.1	chr11	+	1881	1	Intergenic	novelGene_4665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGGTGAAATAATATCTA	7111	False	NA	NA	False	NA	NA	NA	85118194	85120075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85118200_85120100
ES.5835.2	chr11	+	4478	1	Intergenic	novelGene_4666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCACTGACTGCTCTTCC	7113	False	NA	NA	False	NA	NA	NA	85118196	85122674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85118200_85122700
ES.5836.1	chr11	-	180	1	Intergenic	novelGene_4658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTGCTGT	8636	False	NA	NA	False	NA	NA	NA	85074845	85074665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85074700_85074800
ES.5836.11	chr11	-	6431	1	NIC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	41427	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTAGTGTATGCTTCCGA	9595	False	NA	-11	True	AATAAA	-14	NA	85084529	85078098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85078100_85084500
ES.5836.15	chr11	-	4271	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	-3	2195	-3	-2195	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTATTTAATCTTCA	NA	False	NA	1	True	AATAAA	-29	NA	85125959	85080282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.17	chr11	-	6871	12	NIC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	56	-2211	intron_retention	FALSE	canonical	3	360	junction_11	23.1834224043855	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTCACATGGATTAT	NA	False	NA	-15	True	AATAAA	-13	NA	85125900	85080298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.2	chr11	-	177	2	Intergenic	novelGene_4659	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAAGTGCT	5510	False	NA	NA	False	NA	NA	NA	85077971	85074667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85074683_85077809
ES.5836.20	chr11	-	4153	12	NNC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	12	-2212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	118.190978665956	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTCACATGGATTA	NA	False	NA	-16	True	AATAAA	-12	NA	85125944	85080299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092408_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.21	chr11	-	4749	13	NNC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	56	-2217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.499510522684	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTAAGTTTTCACATG	NA	False	NA	-21	True	AATAAA	-7	NA	85125900	85080304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85080807_85082922_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.22	chr11	-	3611	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	-18	2870	-18	-2870	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGCCTGAACTTTTT	NA	False	NA	NA	False	AATACA	-13	NA	85125974	85080957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.23	chr11	-	3101	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	53	3309	53	-3309	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATCTTAGAAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	85125903	85081396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.24	chr11	-	2424	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	-7	4046	-7	-4046	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCATTCTTATTATGT	NA	False	NA	86	True	AATAAA	-20	NA	85125963	85082133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.26	chr11	-	5029	12	NIC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	59	-4050	intron_retention	FALSE	canonical	3	360	junction_11	23.1834224043855	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGCATTCTTATT	NA	False	NA	82	True	AATAAA	-16	NA	85125897	85082137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.29	chr11	-	4186	12	NIC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	34	-4052	intron_retention	FALSE	canonical	3	360	junction_11	22.2075112004702	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAGTTGCATTCTTA	NA	False	NA	80	True	AATAAA	-14	NA	85125922	85082139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85082726_85085400_85085567_85086891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.3	chr11	-	205	1	Intergenic	novelGene_4660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTGCTGCAGAGGC	5511	False	NA	NA	False	AAAAAG	-5	NA	85077970	85077765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85077800_85078000
ES.5836.30	chr11	-	2805	12	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	8	6325	8	-6325	5prime_fragment	FALSE	canonical	3	360	junction_11	23.1834224043855	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAATGTTCTTTTTT	NA	False	NA	NA	False	GATAAA	-13	NA	85125948	85084412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.31	chr11	-	175	1	Intergenic	novelGene_4663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	135	False	NA	NA	False	NA	NA	NA	85093989	85093814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85093800_85094000
ES.5836.32	chr11	-	158	1	Intergenic	novelGene_4664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	85097003	85096845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85096800_85097000
ES.5836.4	chr11	-	207	2	Intergenic	novelGene_4661	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	0	509	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTGCTGCAGAGGC	NA	False	NA	NA	False	AAAAAG	-5	NA	85097005	85077765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85077922_85096954
ES.5836.5	chr11	-	6484	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	-21	0	-21	0	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCGATTGAATTGTGA	NA	False	NA	0	True	AATAAA	-25	NA	85125977	85078087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5836.8	chr11	-	6521	13	NNC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.499510522684	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTAGTGTATGCTTCCGA	NA	False	NA	-11	True	AATAAA	-14	NA	85125950	85078098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85082726_85085325_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ES.5837.1	chr11	+	4182	3	NIC	ENSMUSG00000085628.5	novel	635	4	NA	NA	-6	3649	intron_retention	FALSE	canonical	2	3	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCTAACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	85125990	85132779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_85126159_85128236_85128341_85128869
ES.5837.2	chr11	+	4041	4	FSM	ENSMUSG00000085628.5	ENSMUST00000136454.2	635	4	-4	-3402	-4	3402	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGATTTTAGGTAGAA	NA	False	NA	NA	False	NA	NA	NA	85125992	85132532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85126159_85127965_85128074_85128236_85128341_85128869
ES.5837.3	chr11	+	4130	4	NNC	ENSMUSG00000085628.5	novel	635	4	NA	NA	4	3649	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	2.44948974278318	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCTAACTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	85126000	85132779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_85126159_85128236_85128341_85128869_85132260_85132301
ES.5837.4	chr11	+	2133	3	NIC	ENSMUSG00000085628.5	novel	635	4	NA	NA	72	1678	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATATCTCTGTTCCTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	85126068	85130808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_85126159_85128236_85128341_85128869
ES.5837.5	chr11	+	5240	2	NNC	ENSMUSG00000085628.5	novel	635	4	NA	NA	1214	3362	intron_retention	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85127210	85132492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_85132260_85132301
ES.5838.1	chr11	-	2364	1	Intergenic	novelGene_4667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACACATAGAATTACCAT	4456	False	NA	NA	False	NA	NA	NA	85135499	85133135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85133100_85135500
ES.5839.1	chr11	+	159	1	Intergenic	novelGene_4668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85142207	85142366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85142200_85142400
ES.584.1	chr1	-	196	1	Antisense	novelGene_ENSMUSG00000026017.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTTTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	60146830	60146634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60146600_60146800
ES.5840.1	chr11	+	567	1	Intergenic	novelGene_4669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTCATGAGATTAAAC	NA	False	NA	NA	False	NA	NA	NA	85147409	85147976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85147400_85148000
ES.5841.1	chr11	-	135	1	Intergenic	novelGene_4670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTTAAAATACAGA	NA	False	NA	NA	False	AATAAA	-10	NA	85148763	85148628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85148600_85148800
ES.5842.1	chr11	-	133	1	Intergenic	novelGene_4671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	85153270	85153137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85153100_85153300
ES.5843.1	chr11	-	227	1	Intergenic	novelGene_4672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAAAAATAACAAA	NA	False	NA	NA	False	AATAAA	-11	NA	85161293	85161066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85161100_85161300
ES.5844.1	chr11	+	237	1	Intergenic	novelGene_4673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTTTATTTTTTATTT	2776	False	NA	NA	False	NA	NA	NA	85173876	85174113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85173900_85174100
ES.5845.1	chr11	-	177	1	Intergenic	novelGene_4674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85191347	85191170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85191200_85191300
ES.5846.1	chr11	+	413	1	Intergenic	novelGene_4675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGAGACAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	85191927	85192340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85191900_85192300
ES.5847.1	chr11	+	178	1	Intergenic	novelGene_4676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAGGTAAGT	1560	False	NA	NA	False	NA	NA	NA	85195923	85196101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85195900_85196100
ES.5848.1	chr11	+	2197	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	-51	753	-51	-753	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTTTTATTTTGGCCTT	7655	False	NA	29	True	AATAAA	-29	NA	85202018	85237139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ES.5848.2	chr11	+	2910	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	-6	-5	-6	5	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGTTTTGTTGGTGACT	7700	False	NA	8	True	AATAAA	-18	NA	85202063	85237897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ES.5848.3	chr11	+	1340	1	NIC	ENSMUSG00000020525.18	novel	2899	6	NA	NA	2	-24618	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTGTGTGGGAT	7708	False	NA	NA	False	ATTAAA	-33	NA	85202071	85203411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_85202100_85203400
ES.5848.5	chr11	+	5149	2	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	52	15682	52	-5819	5prime_fragment	FALSE	canonical	3	65	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAAGCAGCTGTGTGG	7758	False	NA	NA	False	NA	NA	NA	85202121	85222210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_85202750_85217689
ES.5848.6	chr11	+	3009	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	87	-197	87	197	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACGGGAAATACTGAAGC	7793	False	NA	NA	False	AGTAAA	-15	NA	85202156	85238089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ES.5849.1	chr11	-	197	1	Intergenic	novelGene_4677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTTCATAACGA	NA	False	NA	NA	False	NA	NA	NA	85209132	85208935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85208900_85209100
ES.585.1	chr1	+	180	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60200121	60200301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60200100_60200300
ES.585.2	chr1	+	178	2	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	60200123	60206694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60200271_60206663
ES.585.3	chr1	+	176	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	60206518	60206694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60206500_60206700
ES.5850.1	chr11	-	173	1	Intergenic	novelGene_4678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTAGATTTGT	NA	False	NA	NA	False	NA	NA	NA	85214556	85214383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85214400_85214600
ES.5851.1	chr11	-	1358	1	Intergenic	novelGene_4679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	85240085	85238727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85238700_85240100
ES.5852.1	chr11	+	3922	26	NNC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	31.8578342013389	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCCTGAGTTGCTGGGG	3478	False	NA	11	True	AATAAA	-19	NA	85243992	85716881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712601_85712939_85716027
ES.5852.2	chr11	+	2781	23	NIC	ENSMUSG00000059439.16	novel	2769	24	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	28.0667739801512	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCATAGTATCTAAATTA	3496	False	NA	NA	False	AATAAA	-18	NA	85244010	85493873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85493571
ES.5852.3	chr11	+	4209	19	ISM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	-8	264034	-8	-41728	5prime_fragment	FALSE	canonical	3	82	junction_16	16.9133594650815	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGTTATTTTGGTTTTT	3515	False	NA	NA	False	TATAAA	-14	NA	85244029	85452142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896
ES.5852.4	chr11	+	3473	24	FSM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	3	-707	3	-1	multi-exon	FALSE	canonical	3	61	junction_23	18.8377812860411	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	3526	False	NA	13	True	AATAAA	-21	NA	85244040	85716883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
ES.5852.5	chr11	+	1309	5	NNC	ENSMUSG00000059439.16	novel	414	6	NA	NA	1675	3484	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.3197007879842	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTCCATGAACTG	5198	False	NA	NA	False	TATAAA	-39	NA	85245712	85265473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85264491
ES.5852.6	chr11	+	236	1	Intergenic	novelGene_4684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATTTGTTGATGTGT	NA	False	NA	NA	False	NA	NA	NA	85393982	85394218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85394000_85394200
ES.5852.7	chr11	+	3386	1	Intergenic	novelGene_4685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTCTGAAGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	85456259	85459645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85456300_85459600
ES.5852.8	chr11	+	3479	1	Intergenic	novelGene_4687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCCAAGGTCAAGATGAA	NA	False	NA	NA	False	NA	NA	NA	85484222	85487701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85484200_85487700
ES.5852.9	chr11	+	1016	3	FSM	ENSMUSG00000059439.16	ENSMUST00000149662.2	412	3	62	-666	62	1	multi-exon	FALSE	canonical	3	22	junction_1	13.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTGAGTTGCTGGGGT	4384	False	NA	12	True	AATAAA	-20	NA	85692708	85716882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85692779_85712847_85712939_85716027
ES.5853.1	chr11	-	2286	1	Intergenic	novelGene_4680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTAGTGCACG	NA	False	NA	NA	False	NA	NA	NA	85249113	85246827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85246800_85249100
ES.5854.1	chr11	-	177	1	Intergenic	novelGene_4681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACTTTTC	NA	False	NA	NA	False	NA	NA	NA	85261621	85261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85261400_85261600
ES.5855.1	chr11	-	148	1	Intergenic	novelGene_4682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATACAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	85291930	85291782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85291800_85291900
ES.5856.1	chr11	-	130	1	Intergenic	novelGene_4683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAACCAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85377458	85377328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85377300_85377500
ES.5857.1	chr11	-	172	1	Intergenic	novelGene_4686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACAAAGACCCT	NA	False	NA	NA	False	NA	NA	NA	85482934	85482762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85482800_85482900
ES.5858.1	chr11	-	1767	1	Intergenic	novelGene_4688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAATAAAAATATAG	NA	False	NA	NA	False	NA	NA	NA	85500728	85498961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85499000_85500700
ES.5859.1	chr11	-	1079	1	Genic_Genomic	ENSMUSG00000086199.8	novel	NA	NA	NA	NA	15291	768	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCATTTGTCAATTCTT	NA	False	NA	NA	False	NA	NA	NA	85595279	85594200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_85594200_85595300
ES.586.1	chr1	+	1267	4	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-132	9975	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	7.40870359029762	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTGCTTCTACCT	NA	False	NA	NA	False	NA	NA	NA	60219625	60235032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60219650_60220621_60220914_60233662_60233755_60234173
ES.586.10	chr1	+	9006	55	NNC	ENSMUSG00000073664.12	novel	5000	31	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.05045656883495	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAGATTTGAGAGATGT	NA	False	NA	NA	False	AATAAA	-16	NA	60219976	60370619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60220207_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.11	chr1	+	266	2	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	50	-4247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAACCGTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	60220020	60220810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60220098_60220621
ES.586.12	chr1	+	8943	56	NNC	ENSMUSG00000073664.12	novel	5000	31	NA	NA	164	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	6.21658671726078	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGAGATGTGGCTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	60220134	60370627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60220207_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60267780_60267868_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.13	chr1	+	14354	53	ISM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	13935	968	13722	-968	3prime_fragment	FALSE	canonical	1	1	junction_8	5.77598963061896	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTTCTGGATAGCCAT	2351	False	NA	NA	False	NA	NA	NA	60233692	60376519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.14	chr1	+	4256	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATGAGAAGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60246498	60250754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60246500_60250800
ES.586.15	chr1	+	3116	1	FSM	ENSMUSG00000073664.12	ENSMUST00000185573.2	2677	1	-422	-17	-422	17	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTGGTGGTAGTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	60265958	60269074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60266000_60269100
ES.586.16	chr1	+	177	1	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAACTCTTTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	60271921	60272098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60271900_60272100
ES.586.17	chr1	+	5944	37	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	12150	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.21874903064699	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAGAGATTTGAGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	60286772	60370617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297902_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.18	chr1	+	4351	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTCTGTAAAGAACAGT	NA	False	NA	NA	False	NA	NA	NA	60361546	60365897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60361500_60365900
ES.586.2	chr1	+	9071	54	NIC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-27	261	combination_of_known_splicesites	TRUE	canonical	1	1	junction_9	6.18321203514449	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTAATAGGAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-22	NA	60219730	60370886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.3	chr1	+	5843	32	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-20	-526	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.59879576765101	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTTGTTTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	60219737	60307989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60219836_60220621_60220914_60233662_60233759_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541
ES.586.4	chr1	+	10838	54	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-16	1782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.65013376578875	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAAGTGTATGGTGTTTG	NA	False	NA	NA	False	TATAAA	-25	NA	60219741	60372407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60220098_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239350_60240022_60240151_60245492_60245576_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.5	chr1	+	8993	56	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.41424035555599	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGAGAGATGTGGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	60219742	60370624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60262696_60262807_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.6	chr1	+	8877	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	-15	6869	-15	-7	multi-exon	FALSE	canonical	1	1	junction_10	5.85232065632702	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGAGATTTGAGAGATG	NA	False	NA	NA	False	AATAAA	-15	NA	60219742	60370618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.7	chr1	+	15734	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	-4	1	-4	-1	multi-exon	FALSE	canonical	1	1	junction_10	5.85232065632702	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTGTAGTTCTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	60219753	60377486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ES.586.8	chr1	+	6074	8	NNC	ENSMUSG00000073664.12	novel	15731	55	NA	NA	7	-17841	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	7.20827189231021	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCATTTATTTGTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	60219764	60251216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60246061
ES.586.9	chr1	+	3210	9	ISM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	30	114034	30	-5604	5prime_fragment	FALSE	canonical	3	8	junction_5	5.56776436283002	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCATGTATTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	60219787	60263453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225
ES.5860.1	chr11	-	1685	1	Intergenic	novelGene_4689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATTCTGAATCAACTT	NA	False	NA	NA	False	NA	NA	NA	85642179	85640494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85640500_85642200
ES.5861.1	chr11	-	7853	1	Antisense	novelGene_ENSMUSG00000059439.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTATGTTTTTGAAGT	NA	False	NA	NA	False	NA	NA	NA	85705320	85697467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_85697500_85705300
ES.5862.1	chr11	+	3118	7	FSM	ENSMUSG00000000093.7	ENSMUST00000000095.7	3626	7	204	304	204	-304	multi-exon	FALSE	canonical	1	1	junction_1	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAATTCGTATTAATTTA	9797	False	NA	NA	False	AATAAA	-40	NA	85723580	85732470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85724328_85725445_85725714_85726620_85726768_85727878_85727956_85728051_85728216_85728669_85729308_85731393
ES.5862.2	chr11	+	2436	7	FSM	ENSMUSG00000000093.7	ENSMUST00000000095.7	3626	7	386	804	386	-804	multi-exon	FALSE	canonical	1	1	junction_1	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGAGCCTCGCGTGGC	9979	False	NA	NA	False	AATAAA	-26	NA	85723762	85731970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85724328_85725445_85725714_85726620_85726768_85727878_85727956_85728051_85728216_85728669_85729308_85731393
ES.5863.1	chr11	-	1742	1	Genic_Genomic	ENSMUSG00000069785.5	novel	NA	NA	NA	NA	-1112	-2914	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGAGAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	85742271	85740529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_85740500_85742300
ES.5864.1	chr11	+	165	1	Intergenic	novelGene_4690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTAGTGATCA	9871	False	NA	NA	False	NA	NA	NA	85749827	85749992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85749800_85750000
ES.5865.1	chr11	+	3200	10	NNC	ENSMUSG00000000094.13	novel	3011	8	NA	NA	-25135	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22726233524303	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTGTGTTTGTCCTTT	NA	False	NA	NA	False	CATAAA	-17	NA	85752112	85806922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_85752221_85752376_85752456_85780885_85781090_85781682_85781778_85789318_85789439_85790575_85790724_85801932_85802086_85802761_85802851_85802931_85803168_85804954
ES.5865.2	chr11	+	150	1	Intergenic	novelGene_4691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	85757881	85758031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85757900_85758000
ES.5865.3	chr11	+	3246	9	FSM	ENSMUSG00000000094.13	ENSMUST00000108047.8	3153	9	-89	-4	-89	2	multi-exon	FALSE	canonical	0	0	junction_5	1.11803398874989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTTGTCCTTTGTT	NA	False	NA	NA	False	CATAAA	-20	NA	85777158	85806925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85777389_85780885_85781090_85781682_85781778_85789318_85789439_85790575_85790724_85801932_85802086_85802761_85802851_85802931_85803168_85804954
ES.5865.4	chr11	+	2931	7	FSM	ENSMUSG00000000094.13	ENSMUST00000108045.3	2959	7	32	-4	32	2	multi-exon	FALSE	canonical	0	0	junction_1	0.897527467855751	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTTGTCCTTTGTT	NA	False	NA	NA	False	CATAAA	-20	NA	85787622	85806925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_85787837_85789318_85789439_85790575_85790724_85801932_85802086_85802761_85802851_85802931_85803168_85804954
ES.5866.1	chr11	+	153	1	Intergenic	novelGene_4695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	85935017	85935170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85935000_85935200
ES.5867.1	chr11	+	1640	1	Intergenic	novelGene_4696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAGAACTTAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	85976208	85977848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85976200_85977800
ES.5867.2	chr11	+	2552	1	Intergenic	novelGene_4697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTAAACAACAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	85976208	85978760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85976200_85978800
ES.5868.1	chr11	+	5163	1	Intergenic	novelGene_4698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85989649	85994812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_85989600_85994800
ES.5869.1	chr11	+	180	1	Intergenic	novelGene_4699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTATAAACCATC	NA	False	NA	NA	False	NA	NA	NA	86007344	86007524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86007300_86007500
ES.587.1	chr1	-	4527	2	Antisense	novelGene_ENSMUSG00000073664.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGCAGCTAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	60228619	60223881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60228155_60228365
ES.587.2	chr1	-	4738	1	Antisense	novelGene_ENSMUSG00000073664.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGCAGCTAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	60228619	60223881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60223900_60228600
ES.587.3	chr1	-	4504	2	Antisense	novelGene_ENSMUSG00000073664.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-34	NA	60228619	60223903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60228146_60228357
ES.5870.1	chr11	+	5186	1	Intergenic	novelGene_4700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCCAAAAAAAAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	86012112	86017298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86012100_86017300
ES.5871.1	chr11	+	140	1	Intergenic	novelGene_4701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	86037976	86038116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86038000_86038100
ES.5872.1	chr11	+	2812	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-35	1646	-35	-1646	multi-exon	FALSE	canonical	3	24	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCCGTCTCTGTTTCTGT	NA	False	NA	8	True	NA	NA	NA	86092160	86100372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86092379_86097778
ES.5872.2	chr11	+	3610	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	-3	816	-3	-816	multi-exon	FALSE	canonical	3	24	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCTGTTTCCAAGAAAAA	NA	False	NA	NA	False	AGTAAA	-15	NA	86092192	86101202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86092379_86097778
ES.5872.3	chr11	+	3441	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	0	982	0	-982	multi-exon	FALSE	canonical	3	24	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAATGCCCTTAATTT	NA	False	NA	NA	False	TATAAA	-22	NA	86092195	86101036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86092379_86097778
ES.5872.4	chr11	+	1353	2	NNC	ENSMUSG00000085208.4	novel	4423	2	NA	NA	4	-7592	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAACAAAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	86092212	86094426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86092379_86093239
ES.5872.5	chr11	+	2327	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	19	2077	6	-2077	multi-exon	FALSE	canonical	3	24	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAGCTATAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	86092214	86099941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86092379_86097778
ES.5872.6	chr11	+	3863	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	26	534	13	-534	multi-exon	FALSE	canonical	3	24	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACATAAAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	86092221	86101484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86092379_86097778
ES.5872.7	chr11	+	5636	1	NIC	ENSMUSG00000085208.4	novel	4423	2	NA	NA	2527	-1647	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCCGTCTCTGTTTCTG	NA	False	NA	7	True	NA	NA	NA	86094735	86100371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86094700_86100400
ES.5873.1	chr11	-	175	2	Intergenic	novelGene_4692	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	86072942	85873242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85873258_86072782
ES.5873.10	chr11	-	6562	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	43	326	14	-326	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGATTTCTAAATTG	NA	False	NA	NA	False	AGTAAA	-19	NA	86091976	85949289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.11	chr11	-	4747	19	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	13	-1847	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.6935019001395	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	86092006	85950810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.12	chr11	-	5142	21	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-9	-1847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.5575820452562	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	86092001	85950810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85994729_85994806_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.13	chr11	-	5085	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	-1	1847	-1	-1847	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	86092020	85950810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.14	chr11	-	5248	20	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-536	-1847	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	21.0067922006088	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTCTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	86092555	85950810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86092306
ES.5873.15	chr11	-	5083	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	6	-1848	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGCTTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	86091984	85950811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
ES.5873.16	chr11	-	4532	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	1	2398	1	-2398	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGAAGTTGGGGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	86092018	85951361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.17	chr11	-	4315	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	35	2581	6	-2581	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTGTTGTCTCATT	NA	False	NA	NA	False	TATAAA	-17	NA	86091984	85951544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.18	chr11	-	4232	20	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	0	-2644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1162197573833	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATATGTCACTGTGTAT	NA	False	NA	NA	False	TTTAAA	-15	NA	86092019	85951607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955658_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.19	chr11	-	3966	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-12	-2985	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCTATACAAAGTACTT	NA	False	NA	55	True	AATACA	-22	NA	86092004	85951948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
ES.5873.2	chr11	-	175	1	Intergenic	novelGene_4693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAACGAGGCCCCCAA	NA	False	NA	NA	False	NA	NA	NA	85878182	85878007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85878000_85878200
ES.5873.20	chr11	-	4010	21	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	10	-2987	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.5575820452562	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATCTATACAAAGTAC	NA	False	NA	53	True	AATACA	-20	NA	86092009	85951950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85994729_85994806_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.21	chr11	-	3901	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	-11	3041	-11	-3041	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCGGATTTTAAGTATGT	NA	False	NA	-1	True	GATAAA	-45	NA	86092030	85952004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.22	chr11	-	5535	20	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-11	-3042	intron_retention	FALSE	canonical	0	0	junction_11	26.3458775363034	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCGGATTTTAAGTATG	NA	False	NA	-2	True	GATAAA	-44	NA	86092003	85952005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86042378_86042587_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.23	chr11	-	4061	21	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	5	-3044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	25.9767203472648	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATCGGATTTTAAGTA	NA	False	NA	-4	True	GATAAA	-42	NA	86091985	85952007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86042378_86042587_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.24	chr11	-	5401	20	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-11	-3044	intron_retention	FALSE	canonical	0	0	junction_4	25.9530793330928	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATCGGATTTTAAGTA	NA	False	NA	-4	True	GATAAA	-42	NA	86092003	85952007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85994729_85994806_85999592_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.25	chr11	-	3569	19	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	13	-3060	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.3694665367371	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTCATTGGAATTCAT	NA	False	NA	-20	True	GATAAA	-26	NA	86092006	85952023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
ES.5873.26	chr11	-	3276	18	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	1	-44965	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.4588084076777	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTCTCTGTAGACAAA	NA	False	NA	NA	False	AATAAA	-20	NA	86092018	85993928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85994627_85994729_85994806_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.28	chr11	-	212	1	Intergenic	novelGene_4702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGGAGAAAGTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	86072943	86072731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86072700_86072900
ES.5873.29	chr11	-	3332	3	ISM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	12	136707	12	188	5prime_fragment	FALSE	canonical	3	89	junction_2	10.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGATCTGTCCGTT	NA	False	NA	NA	False	AATAAA	-21	NA	86092007	86085670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86088807_86089697_86089821_86091934
ES.5873.3	chr11	-	195	1	Intergenic	novelGene_4694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	85900328	85900133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_85900100_85900300
ES.5873.4	chr11	-	6948	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	-9	-8	-9	8	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGATGACTTATCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	86092028	85948955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.5	chr11	-	7788	20	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	-1222	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	21.0067922006088	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGATGACTTATCTACA	NA	False	NA	NA	False	AATAAA	-21	NA	86093241	85948956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86092306
ES.5873.6	chr11	-	6972	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGATGACTTATCTACA	NA	False	NA	NA	False	AATAAA	-21	NA	86092018	85948956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
ES.5873.7	chr11	-	6572	19	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	13	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.6935019001395	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCGATGACTTATCTACA	NA	False	NA	NA	False	AATAAA	-21	NA	86091977	85948956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_85952872_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ES.5873.8	chr11	-	3316	5	NNC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.3460446795211	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTCCGATGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	86091984	85948963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_85951901_86083720_86083815_86088694_86088807_86089697_86089821_86091934
ES.5874.1	chr11	+	4170	3	Antisense	novelGene_ENSMUSG00000018068.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCCAATACAT	NA	False	NA	NA	False	NA	NA	NA	86108477	86113819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86109486_86110448_86112643_86112851
ES.5874.2	chr11	+	3801	2	Antisense	novelGene_ENSMUSG00000018068.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCAATACATCATTAA	NA	False	NA	NA	False	NA	NA	NA	86109815	86113825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86112643_86112851
ES.5875.1	chr11	+	3563	3	Antisense	novelGene_ENSMUSG00000018068.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGGAGGTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	86141204	86146145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86141908_86143083_86145712_86145913
ES.5875.2	chr11	+	4744	2	Antisense	novelGene_ENSMUSG00000018068.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGTTTTTTTTAAAGCA	NA	False	NA	NA	False	NA	NA	NA	86141204	86146150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86145712_86145913
ES.5876.10	chr11	-	8525	23	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_2	47.2992277119697	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148387	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105734_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
ES.5876.11	chr11	-	5906	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148389	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
ES.5876.12	chr11	-	5893	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_26	59.0382986717874	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148389	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148343
ES.5876.14	chr11	-	7346	25	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_23	54.421898676503	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148391	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029
ES.5876.15	chr11	-	5736	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_25	53.2315695804661	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148431	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148330
ES.5876.17	chr11	-	5647	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_24	44.1748420106588	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148431	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148343
ES.5876.18	chr11	-	5889	27	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	58.0020021078644	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148389	86101508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029_86148242_86148330
ES.5876.19	chr11	-	6083	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-2	intron_retention	FALSE	canonical	3	38	junction_24	39.4466719832682	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148387	86101508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147324_86148029
ES.5876.2	chr11	-	6813	24	FSM	ENSMUSG00000018068.14	ENSMUST00000108039.8	4369	24	-1037	-1407	-8	0	multi-exon	FALSE	canonical	3	154	junction_20	24.6346460193577	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148409	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
ES.5876.20	chr11	-	5986	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_20	60.5196695298314	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148388	86101508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141799_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
ES.5876.22	chr11	-	5960	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-6	-2	intron_retention	FALSE	canonical	0	0	junction_12	60.6576491466657	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAGCTTTTATGTTTT	NA	False	NA	NA	False	TATAAA	-20	NA	86148407	86101508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124035_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
ES.5876.26	chr11	-	6402	11	ISM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	22741	4	-2633	-4	intron_retention	FALSE	canonical	3	159	junction_7	30.0680893972331	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	TATAAA	-18	NA	86125635	86101510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790
ES.5876.27	chr11	-	5909	27	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	64.0715206883184	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	TATAAA	-18	NA	86148398	86101510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143185_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
ES.5876.29	chr11	-	5651	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-25	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_24	44.6783061638047	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	TATAAA	-18	NA	86148426	86101510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148330
ES.5876.3	chr11	-	5962	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-56	0	-31	0	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148432	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.30	chr11	-	5660	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	57.6218847314109	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	TATAAA	-18	NA	86148387	86101510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148343
ES.5876.32	chr11	-	7245	24	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-11	-4	intron_retention	FALSE	canonical	3	118	junction_23	28.8216600968306	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGTAGCTTTTATGTT	NA	False	NA	NA	False	TATAAA	-18	NA	86148355	86101510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.33	chr11	-	6035	25	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-11	-6	intron_retention	FALSE	canonical	0	0	junction_9	54.4372089863379	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTGTAGCTTTTATG	NA	False	NA	NA	False	TATAAA	-16	NA	86148355	86101512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117617_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147324_86148029
ES.5876.35	chr11	-	8260	23	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	1	-9	intron_retention	FALSE	canonical	3	118	junction_22	29.0364902940256	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGAACTGTAGCTTTT	NA	False	NA	NA	False	TATAAA	-13	NA	86148366	86101515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.36	chr11	-	5702	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	-115	combination_of_known_splicesites	FALSE	canonical	2	4	junction_25	46.0912833407793	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAGTTAAGGTTATAAG	NA	False	NA	NA	False	AATAAA	-39	NA	86148389	86101621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148343
ES.5876.38	chr11	-	5825	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-55	136	-30	-136	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATGTTAATATTCATAT	NA	False	NA	NA	False	AATAAA	-18	NA	86148431	86101642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.39	chr11	-	5730	27	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	1	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	58.0020021078644	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTAAATGTTAATATTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	86148366	86101644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029_86148242_86148330
ES.5876.4	chr11	-	5871	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148430	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
ES.5876.41	chr11	-	5855	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-139	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATGTTAATATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	86148388	86101645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
ES.5876.42	chr11	-	4398	18	NNC	ENSMUSG00000018068.14	novel	4369	24	NA	NA	-5644	-139	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	53.43812513546	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATGTTAATATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	86135353	86101645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129411_86133738_86133865_86135228
ES.5876.43	chr11	-	5857	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-139	intron_retention	FALSE	canonical	3	38	junction_24	47.1380949975707	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAATGTTAATATTCA	NA	False	NA	NA	False	AATAAA	-15	NA	86148387	86101645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147324_86148029_86148242_86148330
ES.5876.44	chr11	-	5699	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	-141	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAGTAAATGTTAATATT	NA	False	NA	NA	False	AATAAA	-13	NA	86148399	86101647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
ES.5876.45	chr11	-	5498	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-10	-142	combination_of_known_splicesites	FALSE	canonical	2	6	junction_24	44.6783061638047	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAGTAAATGTTAATAT	NA	False	NA	NA	False	AATAAA	-12	NA	86148411	86101648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148330
ES.5876.47	chr11	-	5939	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-147	intron_retention	FALSE	canonical	3	38	junction_24	39.4466719832682	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATATTAGTAAATGTT	NA	False	NA	NA	False	AATAAA	-7	NA	86148388	86101653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147324_86148029
ES.5876.48	chr11	-	5510	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	-398	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTTCTGAAGTCTCTT	NA	False	NA	NA	False	TTTAAA	-34	NA	86148391	86101904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
ES.5876.50	chr11	-	5467	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	9	430	0	-430	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACCACAAGAATTTTCC	NA	False	NA	NA	False	AGTAAA	-17	NA	86148367	86101936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.51	chr11	-	1315	1	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	15831	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTAAGGCAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	86104228	86102913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86102900_86104200
ES.5876.52	chr11	-	3713	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-18	-528	combination_of_known_splicesites	FALSE	canonical	2	6	junction_24	44.6783061638047	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTTGCTATACTGAAT	NA	False	NA	NA	False	AATAAA	-39	NA	86148419	86103441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148330
ES.5876.55	chr11	-	4889	24	FSM	ENSMUSG00000018068.14	ENSMUST00000108039.8	4369	24	-1059	539	-30	-539	multi-exon	FALSE	canonical	3	154	junction_20	24.6346460193577	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGCAGCCACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86148431	86103452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
ES.5876.56	chr11	-	3973	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	-13	1946	2	-539	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGCAGCCACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86148389	86103452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.57	chr11	-	3927	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-31	-539	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGCAGCCACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86148432	86103452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
ES.5876.58	chr11	-	3940	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-539	intron_retention	FALSE	canonical	0	0	junction_24	63.747175623709	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGCAGCCACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86148388	86103452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115878_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029
ES.5876.61	chr11	-	3997	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-30	-544	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTTTTAAGTGCAGCC	NA	False	NA	NA	False	AATAAA	-23	NA	86148431	86103457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
ES.5876.62	chr11	-	3937	27	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	58.0020021078644	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	86148388	86103459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029_86148242_86148330
ES.5876.63	chr11	-	4011	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	1	-546	intron_retention	FALSE	canonical	0	0	junction_5	66.7545474106446	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	86148366	86103459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106620_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139803_86140043_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
ES.5876.64	chr11	-	3651	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-546	combination_of_known_junctions	FALSE	canonical	3	9	junction_24	44.1748420106588	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	86148388	86103459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148343
ES.5876.65	chr11	-	4045	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	-546	intron_retention	FALSE	canonical	3	38	junction_24	47.1380949975707	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	86148389	86103459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147324_86148029_86148242_86148330
ES.5876.67	chr11	-	3740	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	3	-546	combination_of_known_splicesites	FALSE	canonical	3	5	junction_25	53.2315695804661	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTAAGTGCAG	NA	False	NA	NA	False	AATAAA	-21	NA	86148388	86103459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148330
ES.5876.68	chr11	-	3871	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	1	-547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	53.4806731446043	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTTTTAAGTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	86148366	86103460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141926_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
ES.5876.69	chr11	-	3746	26	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-10	-548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	57.1316514727169	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTTTTAAGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	86148411	86103461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148330
ES.5876.7	chr11	-	5924	27	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	62.3335772442991	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148435	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147262_86147324_86148029_86148242_86148343
ES.5876.70	chr11	-	3136	18	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	2	326	intron_retention	FALSE	canonical	0	0	junction_12	47.6331134276323	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACGTGTTTGAAGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	86148365	86115442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140043_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ES.5876.71	chr11	-	175	1	Intergenic	novelGene_4703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	86122121	86121946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86121900_86122100
ES.5876.72	chr11	-	1928	10	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	-7128	intron_retention	FALSE	canonical	3	33	junction_8	60.1875669044408	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATAAGGGAATCAGTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	86148387	86133565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
ES.5876.73	chr11	-	1657	9	NIC	ENSMUSG00000018068.14	novel	3414	12	NA	NA	-30	6797	combination_of_known_junctions	FALSE	canonical	3	50	junction_8	45.9332055815834	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGATCTAATGTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	86148431	86135079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
ES.5876.75	chr11	-	1372	3	NIC	ENSMUSG00000018068.14	novel	694	4	NA	NA	3	428	intron_retention	FALSE	canonical	3	38	junction_2	75	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	86148373	86145757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86146311_86146848_86147324_86148029
ES.5876.8	chr11	-	6702	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	4	0	intron_retention	FALSE	canonical	3	50	junction_24	37.5776741859075	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148387	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86148242_86148330
ES.5876.9	chr11	-	8080	24	NNC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_12	46.6502491600192	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148368	86101506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86125287_86125390_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
ES.5877.1	chr11	+	173	1	Intergenic	novelGene_4704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	86149734	86149907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86149700_86149900
ES.5878.1	chr11	+	5599	1	Genic_Genomic	ENSMUSG00000085208.4	novel	NA	NA	NA	NA	99484	2022	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACATTCCAACAATTT	NA	False	NA	NA	False	NA	NA	NA	86191692	86197291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_86191700_86197300
ES.5879.1	chr11	+	178	2	Antisense	novelGene_ENSMUSG00000034297.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAGAAAGAAAGA	7119	False	NA	NA	False	NA	NA	NA	86208553	86215729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86208713_86215710
ES.588.1	chr1	-	2276	1	Antisense	novelGene_ENSMUSG00000073664.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	60245635	60243359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60243400_60245600
ES.5880.1	chr11	+	3685	1	Antisense	novelGene_ENSMUSG00000034297.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAGTGCCAAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	86243295	86246980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86243300_86247000
ES.5881.1	chr11	-	11270	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-724	0	-724	0	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	8432	False	NA	0	True	AATAAA	-18	NA	86249152	86157858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.10	chr11	-	7347	17	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-709	-629	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.4132930260266	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCAACAATTTTTTTTTT	8447	False	NA	NA	False	ATTAAA	-15	NA	86249137	86158487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86161601_86189459_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.11	chr11	-	4341	9	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	73812	921	-4798	-921	3prime_fragment	FALSE	canonical	3	49	junction_2	10.6770782520313	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACCTTCTGAGGTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	86174616	86158779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576
ES.5881.12	chr11	-	9534	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-694	1706	-694	-1706	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGTGTGACAACCATAC	8462	False	NA	NA	False	AATAAA	-26	NA	86249122	86159564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.13	chr11	-	3463	11	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	70776	2564	-7834	-2564	3prime_fragment	FALSE	canonical	3	49	junction_2	10.555093557141	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGACTTTTTTATT	NA	False	NA	NA	False	AATGAA	-16	NA	86177652	86160422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259
ES.5881.14	chr11	-	8182	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-709	3073	-709	2441	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTACTATGGTTTA	8447	False	NA	NA	False	AATAAA	-18	NA	86249137	86160931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.15	chr11	-	7946	29	NIC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-708	2441	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	18.2581754123394	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTACTATGGTTTA	8448	False	NA	NA	False	AATAAA	-18	NA	86249136	86160931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86248285
ES.5881.16	chr11	-	7884	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-714	3376	-714	2138	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGTATTATTTTTTT	8442	False	NA	NA	False	ATTAAA	-19	NA	86249142	86161234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.17	chr11	-	7745	24	NIC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	3627	2133	intron_retention	FALSE	canonical	0	0	junction_2	18.5674064486838	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTAGAGTATTATT	NA	False	NA	NA	False	ATTAAA	-14	NA	86219382	86161239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86161945_86163288_86163390_86164480_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272
ES.5881.19	chr11	-	5903	24	NIC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	4337	2117	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7107641017721	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTTGCAGTAGGGTTG	NA	False	NA	NA	False	AATATA	-17	NA	86218672	86161255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86161945_86163288_86163390_86164480_86164550_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627
ES.5881.2	chr11	-	11223	30	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-693	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.1970323330831	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	8463	False	NA	0	True	AATAAA	-18	NA	86249121	86157858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86161929_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.20	chr11	-	2626	2	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	83146	3454	4144	2060	3prime_fragment	FALSE	canonical	3	63	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGCCTTCTTGCTTTA	7818	False	NA	NA	False	TATAAA	-18	NA	86165282	86161312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86161945_86163288
ES.5881.21	chr11	-	9451	28	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-711	5960	-711	-446	5prime_fragment	FALSE	canonical	3	30	junction_24	15.9284235767575	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCCTTTGACATTTTAT	8445	False	NA	NA	False	NA	NA	NA	86249139	86163818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.22	chr11	-	8366	28	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-710	7044	-710	1297	5prime_fragment	FALSE	canonical	3	30	junction_24	15.9284235767575	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGACTTTTATTCTTC	8446	False	NA	NA	False	AATAAA	-13	NA	86249138	86164902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.23	chr11	-	3470	9	ISM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-687	51576	-687	12397	5prime_fragment	FALSE	canonical	3	30	junction_5	5.85234995535981	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATTAGTGTTCTTCATC	8469	False	NA	NA	False	ATTAAA	-22	NA	86249115	86209434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.24	chr11	-	1950	1	Intergenic	novelGene_4705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAGTGGTTAATCCAGA	5443	False	NA	NA	False	NA	NA	NA	86226720	86224770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86224800_86226700
ES.5881.3	chr11	-	3023	6	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.8167738026769	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	3647	False	NA	0	True	AATAAA	-18	NA	86169453	86157858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86158647_86160291_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295
ES.5881.6	chr11	-	10865	31	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-535	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0490786709902	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTGGTGTCTCATTCT	8621	False	NA	-2	True	AATAAA	-16	NA	86248963	86157860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86161081_86161244_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246149_86246335_86248285
ES.5881.7	chr11	-	5654	21	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-709	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	13.1662447189774	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGGTGTCTCATTC	8447	False	NA	-3	True	AATAAA	-15	NA	86249137	86157861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86158307_86177671_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.8	chr11	-	11215	30	NNC	ENSMUSG00000034297.15	novel	10546	30	NA	NA	-694	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.990173795307	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGTGGTGTCTCATT	8462	False	NA	-4	True	AATAAA	-14	NA	86249122	86157862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86161945_86163288_86163390_86166199_86166375_86167645_86167795_86169295_86169523_86169649_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218736_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5881.9	chr11	-	10604	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-681	623	-681	-623	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTTTTTTTGTCCCA	8475	False	NA	NA	False	ATTAAA	-21	NA	86249109	86158481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ES.5882.1	chr11	+	177	1	Intergenic	novelGene_4706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGTTTATCCAGG	NA	False	NA	NA	False	NA	NA	NA	86275522	86275699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86275500_86275700
ES.5883.1	chr11	-	176	1	Intergenic	novelGene_4707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTGTAATTGTGTA	7833	False	NA	NA	False	NA	NA	NA	86293330	86293154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86293200_86293300
ES.5884.1	chr11	-	125	1	Intergenic	novelGene_4708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86334279	86334154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86334200_86334300
ES.5885.1	chr11	+	178	1	Intergenic	novelGene_4709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	86345215	86345393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86345200_86345400
ES.5886.1	chr11	+	2045	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	-51	2458	-51	-2458	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCCACTAGCTGTC	NA	False	NA	26	True	AATAAA	-37	NA	86375431	86387393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.10	chr11	+	174	1	Intergenic	novelGene_4710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	86379017	86379191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86379000_86379200
ES.5886.11	chr11	+	97	1	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	13181	1091	13108	-1091	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGAGGATTGATTTT	NA	False	NA	NA	False	AATAAA	-41	NA	86388663	86388760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_86388700_86388800
ES.5886.2	chr11	+	1774	9	NNC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-21	-2484	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	100.903419169025	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCACCTGGTGGACCTG	NA	False	NA	0	True	AATAAA	-11	NA	86375461	86387367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86375626_86376886_86377117_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.3	chr11	+	4344	7	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-13	-2478	intron_retention	FALSE	canonical	3	265	junction_2	22.9249984853992	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGGACCTGTTATGT	NA	False	NA	6	True	AATAAA	-17	NA	86375469	86387373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.4	chr11	+	3235	8	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	-4	-2482	intron_retention	FALSE	canonical	3	265	junction_1	21.9144905931939	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACCTGGTGGACCTGTT	NA	False	NA	2	True	AATAAA	-13	NA	86375478	86387369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.6	chr11	+	4430	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	22	0	-6	0	multi-exon	FALSE	canonical	3	265	junction_2	21.9146070008111	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTAATTTCTATTT	NA	False	NA	NA	False	AATAAA	-30	NA	86375504	86389851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.7	chr11	+	1867	8	NIC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	2	-2478	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	104.417920113438	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGGACCTGTTATGT	NA	False	NA	6	True	AATAAA	-17	NA	86375512	86387373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86375626_86376886_86377332_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5886.9	chr11	+	1464	8	NNC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	1663	-2482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.603212418572	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACCTGGTGGACCTGTT	NA	False	NA	2	True	AATAAA	-13	NA	86377218	86387369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86377332_86377481_86377559_86379892_86379994_86381214_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ES.5887.1	chr11	+	171	1	Intergenic	novelGene_4711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACTAT	NA	False	NA	NA	False	NA	NA	NA	86428128	86428299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86428100_86428300
ES.5888.1	chr11	+	173	1	Intergenic	novelGene_4712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	86429291	86429464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86429300_86429500
ES.5889.1	chr11	-	1621	15	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	0	28887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.6911554134177	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAACATGCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	86435591	86360809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86361032_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.10	chr11	-	4438	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTATAAAACTTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	86435600	86389693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.11	chr11	-	5540	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGTTATAAAACTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	86435595	86389694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.12	chr11	-	5734	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	86.7892466457299	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435590	86389696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.13	chr11	-	5581	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	96.5731961893269	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435598	86389696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404332_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.14	chr11	-	5613	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435598	86389696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.15	chr11	-	5387	14	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	72.0179957786686	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435595	86389696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.16	chr11	-	6795	14	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-4	intron_retention	FALSE	canonical	3	211	junction_8	20.4699230941225	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAACAGTTATAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	86435596	86389700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.17	chr11	-	5550	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	97.7294223865055	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATAACAGTTATAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	86435590	86389700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402735_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.18	chr11	-	4442	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	104.261836796811	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGATAACAGTTATAA	NA	False	NA	NA	False	AATAAA	-11	NA	86435595	86389702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402636_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.19	chr11	-	5609	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	-133	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	86.7892466457299	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTTTTATTACTTGAG	NA	False	NA	NA	False	NA	NA	NA	86435598	86389829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.2	chr11	-	5999	15	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	0	9957	intron_retention	FALSE	canonical	0	0	junction_1	69.6911554134177	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCACTGTTTTTGTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	86435591	86379739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86384340_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.20	chr11	-	5394	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	-1	138	-1	-138	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435632	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.21	chr11	-	5467	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-138	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435590	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.22	chr11	-	5396	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	15	-138	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	60.8554661070149	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435616	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393807_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.24	chr11	-	5414	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.0485573939256	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435595	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407032_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.25	chr11	-	5833	18	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	8	-138	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_10	103.372006008869	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435623	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86407914_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.26	chr11	-	5401	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-138	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435596	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.27	chr11	-	5118	12	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-138	combination_of_known_splicesites	FALSE	canonical	2	9	junction_11	72.6374445248967	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435596	86389834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86435391
ES.5889.28	chr11	-	5234	14	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-142	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	93.8653196066155	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAAGTGATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	86435599	86389838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404147_86404217_86404372_86404464_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.29	chr11	-	4447	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-142	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_16	113.357289134841	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAAGTGATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	86435596	86389838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.3	chr11	-	1429	13	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	1	5609	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.6965620955134	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTATTTCCCTTAACT	NA	False	NA	NA	False	NA	NA	NA	86435590	86384087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86384340_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.30	chr11	-	4291	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	-144	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAGAAGTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	86435600	86389840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.33	chr11	-	4013	6	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-216	-147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	103.24456402155	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAATAGAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	86402687	86389843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393171_86393438_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650
ES.5889.34	chr11	-	4233	14	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	92.1313058346233	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAATAGAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	86435595	86389843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86435391
ES.5889.35	chr11	-	5227	14	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-147	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	70.3205677488508	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAATAGAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	86435595	86389843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86426236_86426287_86435391
ES.5889.37	chr11	-	5732	18	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-150	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	103.82917831658	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAACATAAAATAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	86435596	86389846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86407976_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.38	chr11	-	5483	17	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-1	-151	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	95.7858940554401	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAACATAAAATAGAAGT	NA	False	NA	NA	False	NA	NA	NA	86435592	86389847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407976_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.39	chr11	-	4656	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	36	839	-4	-839	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACCGTTTTTGAGATAG	NA	False	NA	NA	False	NA	NA	NA	86435595	86390535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.4	chr11	-	5931	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	12	-412	12	412	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCATCTTGCCACATGC	NA	False	NA	NA	False	AATAAA	-18	NA	86435619	86389284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.41	chr11	-	4458	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-1104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.0485573939256	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTACTTGATTATTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	86435595	86390800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408151_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.42	chr11	-	4394	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	33	1104	2	-1104	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTACTTGATTATTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	86435598	86390800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.43	chr11	-	4427	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-1111	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCATTACTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	86435595	86390807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.44	chr11	-	3321	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	-1112	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTTCATTACTTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	86435598	86390808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.45	chr11	-	4129	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	35	1367	4	-1367	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAATTGATGCTGTG	NA	False	NA	NA	False	AATATA	-21	NA	86435596	86391063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.46	chr11	-	4479	18	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	12	-1457	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	112.827945690417	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCGCAACGTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-35	NA	86435619	86391153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407829_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.47	chr11	-	4086	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-1466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.0485573939256	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGCAAATATCGCAACG	NA	False	NA	NA	False	AATAAA	-26	NA	86435595	86391162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407032_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.48	chr11	-	4104	17	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-1	-1555	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	104.682984977264	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCCTTAGCCCTAGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	86435601	86391251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.49	chr11	-	4049	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	-1557	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCCTTAGCCCTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	86435591	86391253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.5	chr11	-	4842	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	412	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCATCTTGCCACATGC	NA	False	NA	NA	False	AATAAA	-18	NA	86435595	86389284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.50	chr11	-	3938	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	35	1558	4	-1558	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCCTCCTTAGCCCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	86435596	86391254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.52	chr11	-	3043	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	33	2455	2	707	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTTAAGGAGCATTT	NA	False	NA	NA	False	AATAAA	-32	NA	86435598	86392151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.54	chr11	-	3678	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	700	intron_retention	FALSE	canonical	3	19	junction_9	80.6816515007526	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTGCCTTAAGG	NA	False	NA	NA	False	AATAAA	-25	NA	86435591	86392158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.55	chr11	-	3328	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	3	700	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	95.7976382798658	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTGCCTTAAGG	NA	False	NA	NA	False	AATAAA	-25	NA	86435588	86392158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407829_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.56	chr11	-	2008	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	3	700	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	107.659132863352	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTGCCTTAAGG	NA	False	NA	NA	False	AATAAA	-25	NA	86435588	86392158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.57	chr11	-	2884	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	36	2611	-4	551	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAATGTCTTCCATAAC	NA	False	NA	NA	False	TATAAA	-18	NA	86435595	86392307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.58	chr11	-	2864	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	485	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTTTTTTCCCCTCCT	NA	False	NA	NA	False	AAAAAG	-8	NA	86435598	86392373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.59	chr11	-	2528	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-100	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	84.0485573939256	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTTGTCTGAG	NA	False	NA	-2	True	AATAAA	-23	NA	86435731	86392856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407032_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.6	chr11	-	5660	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	147	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	60.8554661070149	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGTGGAATCTAGTT	NA	False	NA	NA	False	AATATA	-36	NA	86435595	86389549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393807_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.60	chr11	-	2487	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	107.331099145355	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435595	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402636_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407976_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.61	chr11	-	2139	13	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	97.6689419530191	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435595	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404372_86404464_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.62	chr11	-	2358	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	9	3164	9	-2	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435622	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.63	chr11	-	2379	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	111.432969388178	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435595	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407032_86408175_86408219_86408408_86408467_86410720_86410866_86423597_86423667_86424851_86424973_86426242_86426287_86435391
ES.5889.66	chr11	-	2630	17	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	107.487190370527	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435588	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86407569_86407829_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.67	chr11	-	2611	16	NIC	ENSMUSG00000020516.16	novel	2771	15	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	2	junction_10	86.7892466457299	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435631	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.68	chr11	-	2880	17	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	18	junction_10	93.3433681361456	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435595	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.69	chr11	-	2094	12	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_11	72.6374445248967	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435598	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86435391
ES.5889.7	chr11	-	4563	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	130	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTCATGAAACAAG	NA	False	NA	NA	False	AATATA	-19	NA	86435598	86389566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.70	chr11	-	2982	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	12	-2	intron_retention	FALSE	canonical	3	19	junction_9	94.0155069951524	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435579	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393807_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.71	chr11	-	2604	17	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-79	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	104.682984977264	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435710	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.72	chr11	-	2696	18	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	103.82917831658	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCTGTGGCTTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	86435590	86392860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407798_86407976_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.73	chr11	-	2788	18	NNC	ENSMUSG00000020516.16	novel	2771	15	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	112.003645516548	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCACAGCTGTGGCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	86435591	86392861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402636_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86407569_86407814_86407914_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.74	chr11	-	2373	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCACAGCTGTGGCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	86435595	86392861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.75	chr11	-	2332	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	69.9507479792543	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCACAGCTGTGGCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	86435603	86392861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426281_86435391
ES.5889.77	chr11	-	2322	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	-129	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATTTTTGATTCAGC	NA	False	NA	NA	False	TATAAA	-13	NA	86435598	86392987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ES.5889.78	chr11	-	2229	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.9174805154809	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGATTTTTGATTCAGC	NA	False	NA	NA	False	TATAAA	-13	NA	86435599	86392987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402735_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.79	chr11	-	3249	14	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	-4	91	intron_retention	FALSE	canonical	3	215	junction_1	19.7556073981196	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAATAGTATTGTGGAAT	NA	False	NA	NA	False	AATAAA	-17	NA	86435595	86393333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.8	chr11	-	5601	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	9	-79	9	79	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTTACAGATTCTTGT	NA	False	NA	NA	False	AATATA	-30	NA	86435622	86389617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.80	chr11	-	1828	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	35	3668	4	60	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAAACCCAC	NA	False	NA	NA	False	AATAAA	-34	NA	86435596	86393364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.81	chr11	-	1626	14	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	1	-23	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	71.681990013585	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTCAGTGTCATTACC	NA	False	NA	NA	False	AATAAA	-12	NA	86435590	86393447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.82	chr11	-	1786	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	4	-25	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAGTCAGTGTCATTA	NA	False	NA	NA	False	AATAAA	-10	NA	86435596	86393449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.83	chr11	-	3496	13	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	2	-3168	intron_retention	FALSE	canonical	2	4	junction_4	92.4236922487351	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTGTGTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	86435598	86396592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404147_86404217_86404372_86404464_86406916_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.84	chr11	-	1747	15	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	-3	-3168	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	97.5056513275837	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTGTGTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	86435594	86396592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86397008_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.85	chr11	-	3276	13	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	12	-3168	intron_retention	FALSE	canonical	3	21	junction_1	89.098377276656	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTGTGTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	86435579	86396592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86397008_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86404217_86404372_86404464_86406916_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.86	chr11	-	845	8	ISM	ENSMUSG00000020516.16	ENSMUST00000058286.9	3250	10	4	3116	4	2545	5prime_fragment	FALSE	canonical	3	18	junction_1	110.315688006775	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTATTGGGTAACAATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	86435596	86407924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86408076_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.87	chr11	-	2309	5	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	12	1497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.350116180763	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATCTGTTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	86435579	86408972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86410866_86423609_86423667_86424851_86424973_86426236_86426287_86435391
ES.5889.88	chr11	-	2388	5	ISM	ENSMUSG00000020516.16	ENSMUST00000058286.9	3250	10	-46	4164	-15	1497	5prime_fragment	FALSE	canonical	3	250	junction_4	14.2543852901484	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATCTGTTTGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	86435646	86408972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ES.589.1	chr1	-	163	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	60262245	60262082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60262100_60262200
ES.5890.1	chr11	+	2051	9	FSM	ENSMUSG00000020513.16	ENSMUST00000167178.9	1976	9	-75	0	-75	0	multi-exon	FALSE	canonical	1	1	junction_1	14.9702830634561	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCAGTCTGTTAAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	86435741	86458185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86436163_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ES.5890.2	chr11	+	1831	9	NNC	ENSMUSG00000020513.16	novel	1976	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.49749974995	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCAGTCTGTTAAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	86435799	86458185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86436057_86439608_86439829_86440149_86440298_86443669_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ES.5890.3	chr11	+	2463	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	2	-594	2	594	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTCTTTTTAT	NA	False	NA	NA	False	AATGAA	-34	NA	86435818	86458780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ES.5890.4	chr11	+	1884	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	26	-39	26	39	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCAGGTGCTCTGTCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	86435842	86458225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ES.5890.5	chr11	+	174	1	Intergenic	novelGene_4713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	86438697	86438871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86438700_86438900
ES.5890.6	chr11	+	175	1	Intergenic	novelGene_4714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86442710	86442885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86442700_86442900
ES.5891.1	chr11	+	174	1	Intergenic	novelGene_4716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5403	False	NA	NA	False	NA	NA	NA	86490147	86490321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86490100_86490300
ES.5892.1	chr11	+	198	1	Intergenic	novelGene_4718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTTTCTGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	86522142	86522340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86522100_86522300
ES.5893.1	chr11	+	356	1	Intergenic	novelGene_4720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	417	False	NA	NA	False	NA	NA	NA	86545600	86545956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86545600_86546000
ES.5893.2	chr11	+	179	1	Intergenic	novelGene_4719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTTA	417	False	NA	NA	False	NA	NA	NA	86545600	86545779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86545600_86545800
ES.5894.1	chr11	+	4473	2	NNC	ENSMUSG00000072582.10	novel	3038	2	NA	NA	-139	-3647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAATTTAAGAGCCCTAC	NA	False	NA	NA	False	NA	NA	NA	86574671	86579636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86578713_86579204
ES.5894.2	chr11	+	2981	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	-109	166	-109	-166	multi-exon	FALSE	canonical	3	249	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATGATTAAAAA	NA	False	NA	-14	True	NA	NA	NA	86574701	86583117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86574950_86580384
ES.5894.3	chr11	+	827	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	-59	2270	-59	-2270	multi-exon	FALSE	canonical	3	249	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGTTCCCATGTTCC	NA	False	NA	16	True	AATAAA	-23	NA	86574751	86581013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_86574950_86580384
ES.5894.5	chr11	+	4823	1	Genic_Genomic	ENSMUSG00000072582.10	novel	NA	NA	NA	NA	-22	-3672	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	86574788	86579611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_86574800_86579600
ES.5894.6	chr11	+	863	3	NNC	ENSMUSG00000072582.10	novel	3132	3	NA	NA	-3	-2271	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCTGTTCCCATGTTC	NA	False	NA	15	True	AATAAA	-22	NA	86574807	86581012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_86574950_86578861_86578955_86580384
ES.5894.7	chr11	+	4409	1	NIC	ENSMUSG00000072582.10	novel	3038	2	NA	NA	74	-3990	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTCATCAGTTCCAC	NA	False	NA	NA	False	NA	NA	NA	86574884	86579293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86574900_86579300
ES.5894.8	chr11	+	7183	1	NIC	ENSMUSG00000072582.10	novel	3038	2	NA	NA	1146	-144	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTACTCATGACTATTT	NA	False	NA	8	True	AATAAA	-16	NA	86575956	86583139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_86576000_86583100
ES.5894.9	chr11	+	2566	1	ISM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	5907	0	5907	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGGTGTCTGATTCAT	1552	False	NA	NA	False	NA	NA	NA	86580717	86583283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_86580700_86583300
ES.5895.1	chr11	+	613	1	Intergenic	novelGene_4722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACCAAAACA	907	False	NA	NA	False	NA	NA	NA	86600975	86601588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86601000_86601600
ES.5896.1	chr11	+	159	1	Intergenic	novelGene_4723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTTTAAAA	5232	False	NA	NA	False	NA	NA	NA	86624033	86624192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86624000_86624200
ES.5897.1	chr11	+	176	1	Intergenic	novelGene_4724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAGACTAC	7129	False	NA	NA	False	NA	NA	NA	86637372	86637548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86637400_86637500
ES.5898.1	chr11	+	1675	1	Intergenic	novelGene_4725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	86641669	86643344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86641700_86643300
ES.5899.1	chr11	-	2805	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	-4	-14	-4	14	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGAAAGGTTGTCCTT	9868	False	NA	NA	False	AATAAA	-30	NA	86574666	86474676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ES.5899.10	chr11	-	6984	42	Fusion	ENSMUSG00000047126.18_ENSMUSG00000018171.10	novel	2787	12	NA	NA	-11	233	multi-exon	TRUE	canonical	0	0	junction_11	213.988430027429	1675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGTGTCCGTTTTCTT	NA	False	NA	-4	True	TATAAA	-19	NA	86648338	86475522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.11	chr11	-	1801	11	NIC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	0	230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	219.445300701564	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAAATTGTGTCCGTTTT	9887	False	NA	-7	True	TATAAA	-16	NA	86574647	86475525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86556602_86556705_86574565
ES.5899.12	chr11	-	240	1	Intergenic	novelGene_4715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCATTCAAAATCT	5687	False	NA	NA	False	NA	NA	NA	86479569	86479329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86479300_86479600
ES.5899.13	chr11	-	206	1	Intergenic	novelGene_4717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTCTTATTTCAAGA	NA	False	NA	NA	False	NA	NA	NA	86516257	86516051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86516100_86516300
ES.5899.14	chr11	-	298	1	FSM	ENSMUSG00000083992.2	ENSMUST00000117851.2	599	1	324	-23	324	23	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAATAACTC	NA	False	NA	NA	False	AATAAA	-14	NA	86521528	86521230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86521200_86521500
ES.5899.15	chr11	-	178	1	Intergenic	novelGene_4721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAGCAC	NA	False	NA	NA	False	NA	NA	NA	86551357	86551179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86551200_86551400
ES.5899.16	chr11	-	11505	18	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	7210	891	intron_retention	FALSE	canonical	3	851	junction_16	89.30764060975	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGGATATCTTTAAATC	4216	False	NA	NA	False	NA	NA	NA	86610068	86584285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011
ES.5899.17	chr11	-	6654	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-92	-43	-92	43	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCCATGGCTGAGAAT	NA	False	NA	43	True	CATAAA	-18	NA	86648483	86585133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.18	chr11	-	6489	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	214.149252123895	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGTATTTCTTTTCA	NA	False	NA	-1	True	AATAAA	-17	NA	86648346	86585177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593018_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.19	chr11	-	6434	33	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	41	-1	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	263.096136703748	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGTATTTCTTTTCA	NA	False	NA	-1	True	AATAAA	-17	NA	86648286	86585177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86586517_86588090_86588167_86591886_86591908_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.2	chr11	-	2400	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	1	386	1	-386	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCCAGCAAACCAGAGA	9873	False	NA	NA	False	AATAAA	-27	NA	86574661	86475076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ES.5899.20	chr11	-	6660	33	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	270.706495740197	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGGTATTTCTTTTCA	NA	False	NA	-1	True	AATAAA	-17	NA	86648342	86585177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86645121_86645313_86648073
ES.5899.22	chr11	-	6475	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-215	259	-215	45	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTTCATAGTTTCA	NA	False	NA	0	True	ATTAAA	-18	NA	86648606	86585435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.23	chr11	-	5217	1	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	2604	45	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTTCATAGTTTCA	7979	False	NA	0	True	ATTAAA	-18	NA	86590652	86585435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86585400_86590700
ES.5899.25	chr11	-	6193	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-15	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	215.195011141009	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTTCATAGTTTCA	NA	False	NA	0	True	ATTAAA	-18	NA	86648342	86585435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613018_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.3	chr11	-	1409	4	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	22	-396	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	347.069957725464	402	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCATTAAGCCCCAGC	9909	False	NA	NA	False	AATAAA	-17	NA	86574625	86475086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86476278_86477321_86477408_86556632_86556705_86574565
ES.5899.30	chr11	-	6274	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-1	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	214.149252123895	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATGGTTTTCATAGTT	NA	False	NA	-3	True	ATTAAA	-15	NA	86648392	86585438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593018_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.34	chr11	-	6440	28	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-6038	41	intron_retention	FALSE	canonical	3	813	junction_24	119.431035710193	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATGGTTTTCATAGT	7716	False	NA	-4	True	ATTAAA	-14	NA	86623347	86585439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330
ES.5899.35	chr11	-	6012	31	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-29	40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	216.269029991197	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCATGGTTTTCATAG	NA	False	NA	-5	True	ATTAAA	-13	NA	86648356	86585440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86648073
ES.5899.37	chr11	-	6245	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	3	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	214.237748063009	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATCATGGTTTTCATA	NA	False	NA	-6	True	ATTAAA	-12	NA	86648388	86585441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597883_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.39	chr11	-	6018	31	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-24	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	217.91075900214	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAATTGCAGTTTTAATT	NA	False	NA	-2	True	AATAAA	-24	NA	86648351	86585475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86624401_86624671_86627896_86628105_86648073
ES.5899.4	chr11	-	1982	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	-26	831	-26	234	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCCGTTTTCTTT	10002	False	NA	-3	True	TATAAA	-20	NA	86574688	86475521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ES.5899.40	chr11	-	6145	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	213.785556827426	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	86648338	86585478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616079_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.42	chr11	-	6161	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	207.539497638702	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	86648344	86585478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586506_86588088_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.46	chr11	-	6144	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	215.548015370778	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAATTGCAGTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	86648338	86585478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610208_86610319_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.47	chr11	-	6188	33	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	270.956953958442	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAGAATTGCAGTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	86648345	86585479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86621868_86621887_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.48	chr11	-	6181	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	215.439192779865	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAGAATTGCAGTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	86648337	86585479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608907_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.49	chr11	-	6227	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	213.565124575534	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAGAATTGCAGTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	86648387	86585479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593613_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.5	chr11	-	1352	7	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19028	234	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	356.319457166677	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCCGTTTTCTTT	NA	False	NA	-3	True	TATAAA	-20	NA	86512149	86475521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86504659_86504817_86512073
ES.5899.53	chr11	-	6080	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	273.884243000571	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648269	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597883_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617273_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.54	chr11	-	7784	31	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	39	-1	intron_retention	FALSE	canonical	3	813	junction_25	121.291091547932	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648288	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.56	chr11	-	7721	31	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	3	-1	intron_retention	FALSE	canonical	3	813	junction_24	112.316022405038	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648324	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.58	chr11	-	6219	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	214.559292286183	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648389	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623323_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.60	chr11	-	6352	33	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	270.706495740197	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648338	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86645121_86645313_86648073
ES.5899.64	chr11	-	6101	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_5	213.324290369387	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648287	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594592_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.65	chr11	-	6204	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	215.760634511457	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTAGAATTGCAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	86648389	86585481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596129_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.7	chr11	-	1199	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19032	234	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCCGTTTTCTTT	NA	False	NA	-3	True	TATAAA	-20	NA	86512153	86475521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
ES.5899.71	chr11	-	6200	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	215.754123556018	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648389	86585484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603415_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.73	chr11	-	6217	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	214.855152911375	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648388	86585484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598071_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.76	chr11	-	6152	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	214.488113620535	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648328	86585484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594599_86594690_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.77	chr11	-	8811	30	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	35	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	213.191266360324	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648292	86585484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598063_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.79	chr11	-	6150	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	215.195011141009	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	False	NA	-11	True	AATAAA	-15	NA	86648361	86585484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612545_86613052_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.88	chr11	-	6146	32	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	212.767713471621	1275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAAATAACATGTAGAAT	NA	False	NA	-15	True	AATAAA	-11	NA	86648342	86585488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593245_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.89	chr11	-	4611	25	NNC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	1318	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	234.264981585431	1273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGACTGTGGAAATAA	8453	False	NA	-25	True	AATAAA	-1	NA	86615960	86585498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595719_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896
ES.5899.90	chr11	-	6168	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-14	365	-14	-61	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTGTGGAATTTG	NA	False	NA	-68	True	NA	NA	NA	86648405	86585541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.91	chr11	-	5992	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	46	481	-18	-177	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGTGTGTATTTACTAACC	NA	False	NA	NA	False	NA	NA	NA	86648345	86585657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.92	chr11	-	4047	23	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	35804	371	4755	291	3prime_fragment	FALSE	canonical	3	851	junction_18	102.267757455006	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGATTGTTTTTTTTTT	1761	False	NA	NA	False	NA	NA	NA	86612523	86585851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400
ES.5899.93	chr11	-	5619	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	24	876	24	90	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAGTGTATGTAAACA	NA	False	NA	NA	False	AAGAAA	-28	NA	86648367	86586052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.94	chr11	-	6571	31	ISM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	4	1518	4	-552	5prime_fragment	FALSE	canonical	3	813	junction_24	112.316022405038	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTCCGTTGGCTTTT	NA	False	NA	NA	False	AATATA	-18	NA	86648387	86586694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.95	chr11	-	3461	8	ISM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	-1	28904	-1	23	5prime_fragment	FALSE	canonical	3	813	junction_1	49.2904759604547	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAACTCATGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	86648392	86614080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ES.5899.96	chr11	-	5138	1	NIC	ENSMUSG00000047126.18	novel	6519	32	NA	NA	-1909	23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	988	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAACTCATGTAAAGC	5195	False	NA	NA	False	NA	NA	NA	86619218	86614080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86614100_86619200
ES.5899.97	chr11	-	5719	6	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	20849	28623	-10169	0	internal_fragment	FALSE	canonical	3	813	junction_1	52.6421884043587	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8045	False	NA	NA	False	NA	NA	NA	86627478	86614103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401
ES.5899.98	chr11	-	3574	2	ISM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	-64	39368	0	-9825	5prime_fragment	FALSE	canonical	3	828	junction_1	0	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTAAGGGTGCAGGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	86648391	86624848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86628105_86648073
ES.59.1	chr1	-	1690	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGAATTTCAGATTC	NA	False	NA	NA	False	AATAAA	-7	NA	9581042	9579352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9579400_9581000
ES.590.1	chr1	-	174	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAATCTTATTTGG	NA	False	NA	NA	False	NA	NA	NA	60300164	60299990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60300000_60300200
ES.5900.1	chr11	+	1355	1	Antisense	novelGene_ENSMUSG00000018425.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGGAGTCACTAGACT	NA	False	NA	NA	False	NA	NA	NA	86674102	86675457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_86674100_86675500
ES.5901.1	chr11	+	178	1	Intergenic	novelGene_4729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	86712665	86712843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86712700_86712800
ES.5902.1	chr11	-	3707	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	-8	114	8	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGATTTTTGTTTTCAG	8641	False	NA	0	True	ATTAAA	-15	NA	86698458	86659663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.10	chr11	-	2650	17	NIC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	114	-903	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	43.6977813366995	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAAGGCCTTCTTAT	8641	False	NA	-5	True	ATTAAA	-17	NA	86698458	86660574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86697285_86697454_86698263
ES.5902.11	chr11	-	2091	15	NIC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	2748	-906	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	46.8251741990941	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTCAAGGCCTTCT	9850	False	NA	-8	True	ATTAAA	-14	NA	86695117	86660577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86691794_86691915_86695082
ES.5902.13	chr11	-	3278	15	NIC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	2635	-906	intron_retention	FALSE	canonical	3	128	junction_4	19.8016954541055	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTCAAGGCCTTCT	10003	False	NA	-8	True	ATTAAA	-14	NA	86695230	86660577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082
ES.5902.14	chr11	-	2754	18	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	166	-906	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	42.7536598728805	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTCAAGGCCTTCT	8693	False	NA	-8	True	ATTAAA	-14	NA	86698406	86660577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690487_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.16	chr11	-	2586	17	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	415	-906	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_6	42.9592830480212	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTCAAGGCCTTCT	9649	False	NA	-8	True	ATTAAA	-14	NA	86697450	86660577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667547_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285
ES.5902.17	chr11	-	1834	1	NIC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	12666	880	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAGAAGGAGGAGGAG	3738	False	NA	NA	False	NA	NA	NA	86667439	86665605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86665600_86667400
ES.5902.18	chr11	-	2183	15	NNC	ENSMUSG00000018425.19	novel	912	9	NA	NA	199	641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.105682451242	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGTGTACAGTT	8726	False	NA	NA	False	NA	NA	NA	86698373	86665844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86666224_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.19	chr11	-	176	1	Intergenic	novelGene_4726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAAC	2611	False	NA	NA	False	NA	NA	NA	86668566	86668390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86668400_86668600
ES.5902.20	chr11	-	176	1	Intergenic	novelGene_4727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAGAGTGAATA	5392	False	NA	NA	False	NA	NA	NA	86678588	86678412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86678400_86678600
ES.5902.21	chr11	-	1596	10	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	143	20122	143	-4378	5prime_fragment	FALSE	canonical	3	140	junction_7	10.0345083598895	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATACAGTTCAAATTA	8670	False	NA	NA	False	NA	NA	NA	86698429	86679793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.22	chr11	-	302	1	Intergenic	novelGene_4728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAGAGTGGATGT	7417	False	NA	NA	False	NA	NA	NA	86687942	86687640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86687600_86687900
ES.5902.23	chr11	-	4928	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-79	-2	-79	2	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGAATGTCTGTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	86884612	86827248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ES.5902.25	chr11	-	3115	5	NNC	ENSMUSG00000018427.9	novel	4847	5	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.0579756931964	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTGGGAGAATGTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	86884566	86827252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86829814_86835460_86835508_86836758_86836803_86862634_86862949_86884417
ES.5902.26	chr11	-	4455	4	NNC	ENSMUSG00000018427.9	novel	459	4	NA	NA	273	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.6624996744283	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTTGGGAGAATGTCT	5075	False	NA	-11	True	AATAAA	-13	NA	86862577	86827253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86831515_86835398_86835508_86836758_86836803_86862536
ES.5902.27	chr11	-	4488	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-39	398	-39	-398	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCGAAAGGCGTTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	86884572	86827648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ES.5902.28	chr11	-	1207	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	-45	3685	-45	489	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGAAAAAAAAATACCT	NA	False	NA	NA	False	NA	NA	NA	86884578	86830935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ES.5902.29	chr11	-	6311	1	Intergenic	novelGene_4730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACCTCTTGTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	86847673	86841362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86841400_86847700
ES.5902.3	chr11	-	3822	20	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	-46427	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	62.365822730686	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATAGACAGTATGTGGA	7521	False	NA	-13	True	ATTAAA	-2	NA	86744999	86659676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86729849_86729926_86730377_86730411_86744785
ES.5902.30	chr11	-	3193	1	Intergenic	novelGene_4731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAACT	4152	False	NA	NA	False	AAAACA	-14	NA	86855941	86852748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86852700_86855900
ES.5902.31	chr11	-	172	1	Intergenic	novelGene_4732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAACTTAAAAAA	2217	False	NA	NA	False	NA	NA	NA	86873759	86873587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86873600_86873800
ES.5902.4	chr11	-	3530	17	NIC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	165	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	43.5459078875386	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCTATAGACAGTATG	8692	False	NA	-17	True	NA	NA	NA	86698407	86659680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.5	chr11	-	2991	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	708	114	-708	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTCCTTAAAGTGATT	8641	False	NA	NA	False	AATAAA	-31	NA	86698458	86660379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.6	chr11	-	3015	19	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	136	-708	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	53.7902017329284	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTCCTTAAAGTGATT	8663	False	NA	NA	False	AATAAA	-31	NA	86698436	86660379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86674107_86674154_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.7	chr11	-	2800	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	899	114	-899	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGGCCTTCTTATTGCT	8641	False	NA	-1	True	ATTAAA	-21	NA	86698458	86660570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5902.8	chr11	-	3050	19	Fusion	ENSMUSG00000018427.9_ENSMUSG00000018425.19	novel	3813	18	NA	NA	-17	-901	multi-exon	FALSE	canonical	0	0	junction_17	45.5825123495707	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAAGGCCTTCTTATTG	NA	False	NA	-3	True	ATTAAA	-19	NA	86884550	86660572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86862634_86862949_86884417
ES.5902.9	chr11	-	2782	19	NNC	ENSMUSG00000018425.19	novel	3813	18	NA	NA	164	-903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.4058820349418	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAAGGCCTTCTTAT	8691	False	NA	-5	True	ATTAAA	-17	NA	86698408	86660574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86661088_86661855_86662085_86662719_86662790_86663716_86663753_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ES.5903.1	chr11	+	173	1	Intergenic	novelGene_4733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCATTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	86889165	86889338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86889200_86889300
ES.5904.1	chr11	+	184	1	Intergenic	novelGene_4734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAGGTTGTGGAGAGAT	1535	False	NA	NA	False	NA	NA	NA	86901783	86901967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86901800_86902000
ES.5905.1	chr11	-	241	1	Intergenic	novelGene_4735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCCCCTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	86914203	86913962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86914000_86914200
ES.5906.1	chr11	+	1880	1	Intergenic	novelGene_4736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	86940267	86942147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_86940300_86942100
ES.5907.1	chr11	-	2423	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	-88	1	-88	-1	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTGATTCCAGTGTG	NA	False	NA	-9	True	AATAAA	-38	NA	86964976	86924693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ES.5907.3	chr11	-	1175	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	-28	1189	-28	-1189	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAATACCTCATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	86964916	86925881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ES.5907.4	chr11	-	231	1	Intergenic	novelGene_4737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGCCACTCGCTGG	NA	False	NA	NA	False	NA	NA	NA	86952285	86952054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86952100_86952300
ES.5908.1	chr11	-	3243	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	-26	1	-26	-1	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTATCTGTTTTGT	NA	False	NA	0	True	AATAAA	-34	NA	86977626	86968558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
ES.5909.1	chr11	-	3906	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-78	-4	-78	4	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGAGTTCATGTTGCTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	86999612	86979974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.10	chr11	-	143	1	Intergenic	novelGene_4739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	2906	False	NA	NA	False	NA	NA	NA	86990904	86990761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86990800_86990900
ES.5909.3	chr11	-	3682	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	212	-70	-212	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATTTTCTTAATTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	86999604	86980190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.4	chr11	-	2823	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-16	1017	-16	-1017	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAAGTAGCTGTCTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	86999550	86980995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.5	chr11	-	1977	11	NNC	ENSMUSG00000020493.9	novel	3824	10	NA	NA	-70	-1968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.643270060488	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTATTTTCCAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	86999604	86981946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_86982692_86987264_86987316_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.6	chr11	-	1934	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-78	1968	-78	-1968	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCTATTTTCCAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	86999612	86981946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.7	chr11	-	1719	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	2175	-70	-2175	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGAGTCTTCTTTTTCT	NA	False	NA	NA	False	TATAAA	-40	NA	86999604	86982153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.8	chr11	-	1346	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	2548	-70	-2548	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGAAAGACTCAGAATAT	NA	False	NA	NA	False	ACTAAA	-24	NA	86999604	86982526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ES.5909.9	chr11	-	183	1	Intergenic	novelGene_4738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAGAGAGGGGGGA	6847	False	NA	NA	False	NA	NA	NA	86986963	86986780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_86986800_86987000
ES.591.1	chr1	-	177	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60356752	60356575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60356600_60356800
ES.5910.1	chr11	+	3107	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-70	0	-70	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	13	True	AATAAA	-21	NA	86999989	87015461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ES.5910.10	chr11	+	606	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	27	2404	10	124	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAATCCCTTAGTACTA	NA	False	NA	26	True	AATAAA	-38	NA	87000086	87013057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ES.5910.11	chr11	+	3012	5	NNC	ENSMUSG00000020492.12	novel	861	5	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_1	100.039992003198	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGCCTCCATGTTATA	NA	False	NA	11	True	AATAAA	-19	NA	87000086	87015459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87000131_87004162_87004208_87006970_87007017_87008493_87008671_87012759
ES.5910.12	chr11	+	1258	1	FSM	ENSMUSG00000065589.3	ENSMUST00000083655.3	86	1	75	-1247	75	1247	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACGTGGCCATAATTTCT	NA	False	NA	NA	False	NA	NA	NA	87003904	87005162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87003900_87005200
ES.5910.13	chr11	+	992	1	FSM	ENSMUSG00000065589.3	ENSMUST00000083655.3	86	1	75	-981	75	981	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAAAGTCTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	87003904	87004896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87003900_87004900
ES.5910.14	chr11	+	5990	3	FSM	ENSMUSG00000020492.12_ENSMUSG00000065589.3	ENSMUST00000131202.2	673	3	-2790	-2527	75	0	multi-exon	FALSE	canonical	3	196	junction_2	4	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTCCATGTTATAT	NA	False	NA	12	True	AATAAA	-20	NA	87003904	87015460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87007017_87008493_87008671_87012759
ES.5910.15	chr11	+	4220	3	FSM	ENSMUSG00000020492.12_ENSMUSG00000065589.3	ENSMUST00000131202.2	673	3	-2790	-757	75	757	multi-exon	FALSE	canonical	3	196	junction_2	4	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTAGACTTTCTAT	NA	False	NA	5	True	AATAAA	-23	NA	87003904	87013690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87007017_87008493_87008671_87012759
ES.5910.16	chr11	+	3779	2	NIC	ENSMUSG00000020492.12	novel	673	3	NA	NA	-872	757	intron_retention	FALSE	canonical	3	196	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTAGACTTTCTAT	NA	False	NA	5	True	AATAAA	-23	NA	87005822	87013690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87008671_87012759
ES.5910.2	chr11	+	2892	5	NNC	ENSMUSG00000020492.12	novel	861	5	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	85.1803234321167	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTCCATGTTATAT	NA	False	NA	12	True	AATAAA	-20	NA	87000013	87015460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759_87014125_87014314
ES.5910.3	chr11	+	1358	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	-46	1725	-46	803	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTAGTTTTGTATTTGT	NA	False	NA	51	True	NA	NA	NA	87000013	87013736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ES.5910.5	chr11	+	2977	4	ISM	ENSMUSG00000020492.12	ENSMUST00000142263.8	861	5	1	0	1	0	intron_retention	FALSE	canonical	3	5	junction_1	91.9818822739928	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTCCATGTTATAT	NA	False	NA	12	True	AATAAA	-20	NA	87000077	87015460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87000131_87006970_87007017_87008493_87008671_87012759
ES.5910.6	chr11	+	2801	3	NIC	ENSMUSG00000020492.12	novel	3037	4	NA	NA	7	-124	intron_retention	FALSE	canonical	2	3	junction_1	96.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATTCGGATTACTTGT	NA	False	NA	NA	False	AGTAAA	-26	NA	87000083	87015336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87000131_87008493_87008671_87012759
ES.5910.7	chr11	+	2810	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	25	202	8	-201	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTAATTAAAAT	NA	False	NA	NA	False	NA	NA	NA	87000084	87015259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ES.5910.8	chr11	+	1149	3	NIC	ENSMUSG00000020492.12	novel	3037	4	NA	NA	10	754	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	96.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGTTTTAGACTTTC	NA	False	NA	2	True	AATAAA	-20	NA	87000086	87013687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87000131_87008493_87008671_87012759
ES.5910.9	chr11	+	778	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	27	2232	10	296	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAGGTTTCACTATGTA	NA	False	NA	NA	False	TATAAA	-26	NA	87000086	87013229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ES.5911.1	chr11	+	4598	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-140	-1200	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_23	103.32070577559	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1776	False	NA	26	True	AATAAA	-16	NA	87017762	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077
ES.5911.10	chr11	+	3547	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-31	30185	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	112.480807016441	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	1885	False	NA	2	True	NA	NA	NA	87017871	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.100	chr11	+	6056	1	Antisense	novelGene_ENSMUSG00000046442.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	8365	False	NA	2	True	NA	NA	NA	87135638	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_87135600_87141700
ES.5911.11	chr11	+	4326	23	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-28	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	142.5853448939	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	1888	False	NA	22	True	AATAAA	-12	NA	87017874	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073253_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.12	chr11	+	3508	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-28	30189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.093473351277	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1888	False	NA	6	True	NA	NA	NA	87017874	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020543_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87141416
ES.5911.13	chr11	+	3606	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-28	30189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	113.227370807592	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1888	False	NA	6	True	NA	NA	NA	87017874	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077187_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.14	chr11	+	5612	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-19	2	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	105.147829819272	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGTTGTTTTATTTT	1897	False	NA	15	True	AATAAA	-17	NA	87017883	87111511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.15	chr11	+	2401	14	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-19	37477	-19	-25329	5prime_fragment	FALSE	canonical	3	377	junction_12	44.4398403269411	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATGAAATTATGTAAG	1897	False	NA	NA	False	AATAAA	-32	NA	87017883	87074032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246
ES.5911.17	chr11	+	5671	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_23	103.32070577559	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTTGTTTTATTT	1904	False	NA	14	True	AATAAA	-16	NA	87017890	87111510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077
ES.5911.19	chr11	+	4435	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-9	-1206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	106.66641461848	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGTGCCTCTGCAGT	1907	False	NA	20	True	AATAAA	-10	NA	87017893	87110303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068849_87073240_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.2	chr11	+	5750	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-117	-1	-117	1	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTTGTTTTATTT	1799	False	NA	14	True	AATAAA	-16	NA	87017785	87111510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.20	chr11	+	4318	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-9	-1200	combination_of_known_junctions	FALSE	canonical	3	6	junction_19	107.708063112769	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1907	False	NA	26	True	AATAAA	-16	NA	87017893	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.21	chr11	+	3406	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-5	30185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	168.826954727976	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	1911	False	NA	2	True	NA	NA	NA	87017897	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075739_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092146_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.23	chr11	+	4169	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-5	-1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	162.597639707849	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTGCCTCTGCAGTT	1911	False	NA	21	True	AATAAA	-11	NA	87017897	87110304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87108944_87108991_87109077
ES.5911.24	chr11	+	3443	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-5	30189	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_19	115.052351033175	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1911	False	NA	6	True	NA	NA	NA	87017897	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.25	chr11	+	4238	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-4	-1203	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	106.975638301824	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCTGCAGTTTA	1912	False	NA	23	True	AATAAA	-13	NA	87017898	87110306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.26	chr11	+	3254	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-2	30189	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	111.613056942955	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1914	False	NA	6	True	NA	NA	NA	87017900	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.27	chr11	+	4577	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-1	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.986406083675	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	1915	False	NA	22	True	AATAAA	-12	NA	87017901	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87021010_87021159_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.28	chr11	+	3544	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-1	30188	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	143.681934368552	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	1915	False	NA	5	True	NA	NA	NA	87017901	87141697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050660_87050772_87054644_87054696_87057427_87057510_87058268_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.3	chr11	+	4067	22	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-67	-1200	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	143.577580220416	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1849	False	NA	26	True	AATAAA	-16	NA	87017835	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.30	chr11	+	4388	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-1	-1204	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	105.147829819272	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	1915	False	NA	22	True	AATAAA	-12	NA	87017901	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.32	chr11	+	4491	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	1	-1206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	161.217325500911	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGTGCCTCTGCAGT	1917	False	NA	20	True	AATAAA	-10	NA	87017903	87110303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87040570_87040636_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100593_87100714_87107262_87107374_87109077
ES.5911.35	chr11	+	4410	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	2	-1200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	106.984937900707	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1918	False	NA	26	True	AATAAA	-16	NA	87017904	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097609_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.36	chr11	+	3583	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	4	30189	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_23	110.582477703296	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	1920	False	NA	6	True	NA	NA	NA	87017906	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077_87109157_87141416
ES.5911.37	chr11	+	3395	23	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	13	30188	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_21	143.419283602628	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	1929	False	NA	5	True	NA	NA	NA	87017915	87141697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87109077_87109157_87141416
ES.5911.39	chr11	+	4529	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	20	-1200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	137.88853565068	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1936	False	NA	26	True	AATAAA	-16	NA	87017922	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87040518_87040636_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.4	chr11	+	4486	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	-54	1200	-54	-1200	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1862	False	NA	26	True	AATAAA	-16	NA	87017848	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.41	chr11	+	5521	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	22	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	108.886636401245	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	1938	False	NA	12	True	AATAAA	-14	NA	87017924	87111508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.42	chr11	+	3412	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	46	30187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	113.227370807592	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	1962	False	NA	4	True	NA	NA	NA	87017948	87141696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075828_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.45	chr11	+	4360	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	89	-1203	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	106.233327391978	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCTGCAGTTTA	2005	False	NA	23	True	AATAAA	-13	NA	87017991	87110306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075949_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.46	chr11	+	2896	19	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	100	30185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.095775050164	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	2016	False	NA	2	True	NA	NA	NA	87018002	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.47	chr11	+	5514	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	101	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.899857492716	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTGTTTTGTTGTTTT	2017	False	NA	10	True	AATAAA	-12	NA	87018003	87111506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020543_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.48	chr11	+	5319	22	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	101	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	111.706633115882	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	2017	False	NA	12	True	AATAAA	-14	NA	87018003	87111508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.49	chr11	+	4311	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	102	-1207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	138.973008762354	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAATGTGCCTCTGCAG	2018	False	NA	19	True	AATAAA	-9	NA	87018004	87110302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075707_87075929_87077204_87077348_87080919_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.5	chr11	+	3617	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-54	30191	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	1862	False	NA	8	True	NA	NA	NA	87017848	87141700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.50	chr11	+	3372	26	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	102	30186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	111.629931470014	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATGTTTTGTCATAATT	2018	False	NA	3	True	NA	NA	NA	87018004	87141695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092173_87092256_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.52	chr11	+	3360	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	103	30188	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_19	143.342069750309	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	2019	False	NA	5	True	NA	NA	NA	87018005	87141697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107400_87109077_87109157_87141416
ES.5911.53	chr11	+	4241	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	103	-1200	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	108.886636401245	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2019	False	NA	26	True	AATAAA	-16	NA	87018005	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.54	chr11	+	4017	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	106	-1200	combination_of_known_splicesites	FALSE	canonical	2	27	junction_18	103.777903745379	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2022	False	NA	26	True	AATAAA	-16	NA	87018008	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.56	chr11	+	3230	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	115.506020759777	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	2027	False	NA	5	True	NA	NA	NA	87018013	87141697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.58	chr11	+	4174	22	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	-1204	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	109.881589535376	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	2027	False	NA	22	True	AATAAA	-12	NA	87018013	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.61	chr11	+	4202	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	-1200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	104.732695468034	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2027	False	NA	26	True	AATAAA	-16	NA	87018013	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109366_87109484
ES.5911.63	chr11	+	3467	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	30187	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	113.066344523421	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	2028	False	NA	4	True	NA	NA	NA	87018014	87141696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075949_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.64	chr11	+	5392	17	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	112	27173	112	-15025	5prime_fragment	FALSE	canonical	3	377	junction_12	45.6397236516612	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATATTGTCTTTTTTGT	2028	False	NA	NA	False	AATAAA	-13	NA	87018014	87084336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899
ES.5911.65	chr11	+	2199	16	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	-18177	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	119.440733792492	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAAAGTCTCTTATT	2028	False	NA	NA	False	TATAAA	-11	NA	87018014	87081184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899
ES.5911.66	chr11	+	3933	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	879	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	105.147829819272	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGTGAGTGCATCTAA	2028	False	NA	NA	False	AATATA	-21	NA	87018014	87109963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.68	chr11	+	3417	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	30187	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	113.323896665953	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTTTTGTCATAATTT	2028	False	NA	4	True	NA	NA	NA	87018014	87141696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075739_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.69	chr11	+	4387	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	113	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	105.558734848593	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	2029	False	NA	22	True	AATAAA	-12	NA	87018015	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107190_87107374_87109077
ES.5911.7	chr11	+	4460	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-40	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	101.895643268995	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1876	False	NA	26	True	AATAAA	-16	NA	87017862	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.71	chr11	+	3654	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-110	874	combination_of_known_splicesites	FALSE	canonical	2	27	junction_18	103.777903745379	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGATCTCAGTGAGTGCA	2034	False	NA	NA	False	AATATA	-16	NA	87018020	87109958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.72	chr11	+	4149	22	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-109	-1200	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	142.964499343587	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2035	False	NA	26	True	AATAAA	-16	NA	87018021	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.73	chr11	+	3456	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-109	30189	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_23	137.649010167164	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTCATAATTTGT	2035	False	NA	6	True	NA	NA	NA	87018021	87141698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077_87109157_87141416
ES.5911.75	chr11	+	3718	18	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-99	-1206	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	122.920769485609	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGTGCCTCTGCAGT	2045	False	NA	20	True	AATAAA	-10	NA	87018031	87110303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.76	chr11	+	3447	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-99	30184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	182.02368874377	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTATGTTTTGTCATAA	2045	False	NA	1	True	NA	NA	NA	87018031	87141693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87040518_87040636_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107400_87109077_87109157_87141416
ES.5911.77	chr11	+	3548	26	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-99	30188	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	140.960136208788	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTTTGTCATAATTTG	2045	False	NA	5	True	NA	NA	NA	87018031	87141697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87040518_87040636_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.79	chr11	+	4191	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-98	-1200	combination_of_known_splicesites	FALSE	canonical	1	7	junction_22	106.345773558327	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2046	False	NA	26	True	AATAAA	-16	NA	87018032	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87109077
ES.5911.8	chr11	+	3388	23	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-33	30185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	138.100312385569	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	1883	False	NA	2	True	NA	NA	NA	87017869	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87141416
ES.5911.80	chr11	+	4434	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-97	-1204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	161.388457998086	659	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	2047	False	NA	22	True	AATAAA	-12	NA	87018033	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87040518_87040636_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075949_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.81	chr11	+	7109	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-96	-1206	intron_retention	FALSE	canonical	3	377	junction_12	48.0062840239184	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGTGCCTCTGCAGT	2048	False	NA	20	True	AATAAA	-10	NA	87018034	87110303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87100714_87107262_87107374_87109077
ES.5911.82	chr11	+	5373	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-94	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_19	107.708063112769	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTTTTGTTGTTTTA	2050	False	NA	11	True	AATAAA	-13	NA	87018036	87111507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.84	chr11	+	5393	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-92	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	108.200695450019	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTTGTTGTTTTAT	2052	False	NA	12	True	AATAAA	-14	NA	87018038	87111508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87018321_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.85	chr11	+	4198	23	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-91	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_19	140.136717482524	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2053	False	NA	26	True	AATAAA	-16	NA	87018039	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107400_87109077
ES.5911.87	chr11	+	4340	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-84	-1200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	106.771313664065	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2060	False	NA	26	True	AATAAA	-16	NA	87018046	87110309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057375_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.88	chr11	+	3415	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-84	30186	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	112.92004914983	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATGTTTTGTCATAATT	2060	False	NA	3	True	NA	NA	NA	87018046	87141695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037890_87040126_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.9	chr11	+	3582	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-32	30190	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	109.425488347094	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTCATAATTTGTT	1884	False	NA	7	True	NA	NA	NA	87017870	87141699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.90	chr11	+	3304	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-78	30185	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	145.150961113895	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTTTGTCATAAT	2066	False	NA	2	True	NA	NA	NA	87018052	87141694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075949_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
ES.5911.91	chr11	+	4012	23	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	2637	1204	2409	-1204	3prime_fragment	FALSE	canonical	3	377	junction_11	47.630898367959	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGCCTCTGCAGTTT	4553	False	NA	22	True	AATAAA	-12	NA	87020539	87110305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.93	chr11	+	175	1	Intergenic	novelGene_4740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	520	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATAGG	9563	False	NA	NA	False	NA	NA	NA	87025549	87025724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87025500_87025700
ES.5911.94	chr11	+	3845	1	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	-28239	12801	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTAGCCCTGGCTG	NA	False	NA	NA	False	NA	NA	NA	87049099	87052944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87049100_87052900
ES.5911.95	chr11	+	3056	12	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	50906	1026	-8530	-1026	3prime_fragment	FALSE	canonical	3	399	junction_7	43.2557262248557	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCTTACTCCAATCCCT	NA	False	NA	NA	False	AATAAA	-15	NA	87068808	87110483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ES.5911.96	chr11	+	176	1	Intergenic	novelGene_4743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	543	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87070359	87070535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87070400_87070500
ES.5911.97	chr11	+	1855	1	Intergenic	novelGene_4746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGCCGGACGTGGTGG	NA	False	NA	NA	False	ATTAAA	-38	NA	87085118	87086973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87085100_87087000
ES.5911.98	chr11	+	209	1	Intergenic	novelGene_4747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	87085465	87085674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87085500_87085700
ES.5911.99	chr11	+	1276	1	Intergenic	novelGene_4748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAATATAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	87090358	87091634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87090400_87091600
ES.5912.1	chr11	+	305	1	Intergenic	novelGene_4752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTTTTAGCTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	87274988	87275293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87275000_87275300
ES.5913.1	chr11	+	173	1	Intergenic	novelGene_4753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	87287819	87287992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87287800_87288000
ES.5914.1	chr11	+	4660	20	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-90	-25684	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	27.755262035101	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTTTATCTGTTC	NA	False	NA	NA	False	NA	NA	NA	87295800	87420099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87418874
ES.5914.10	chr11	+	4782	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-69	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	29.105478674794	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295821	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385826_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.13	chr11	+	4878	32	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-66	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	33.2803811112413	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295824	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402441_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87426585_87426637_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.14	chr11	+	4809	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	-46	0	-46	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295844	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.15	chr11	+	4782	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	29.048331372999	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295862	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405681_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.16	chr11	+	3622	20	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-25	-26657	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	27.755262035101	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTCCCCTCCTTAACA	NA	False	NA	NA	False	NA	NA	NA	87295865	87419126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87418874
ES.5914.18	chr11	+	4678	30	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.4658789146078	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295875	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375672_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.19	chr11	+	4681	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_27	27.9264364031353	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295878	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87442356_87442467_87445753_87445806_87446309
ES.5914.2	chr11	+	4638	30	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-89	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.0446676402265	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGCCAGTTGTGATTT	NA	False	NA	15	True	AATAAA	-21	NA	87295801	87446650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385826_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.20	chr11	+	4789	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	26.3604290978395	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295878	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402457_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.21	chr11	+	6513	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	28.7679605734497	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295885	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87421425_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.22	chr11	+	2533	12	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-5	26135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.6206971546836	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACCCCTATTGCTCTCT	NA	False	NA	NA	False	TATAAA	-16	NA	87295885	87401727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87401487_87401583
ES.5914.23	chr11	+	6695	30	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_9	29.4044331633033	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295886	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390311_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.24	chr11	+	5343	19	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	25915	0	-25049	5prime_fragment	FALSE	canonical	1	19	junction_12	23.0148234571859	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTGTCTAAGAGAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	87295890	87420734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669
ES.5914.25	chr11	+	4505	28	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_27	26.8015109211089	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295892	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87446309
ES.5914.26	chr11	+	5194	18	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	2	-25095	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	24.2877786915894	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	87295892	87420688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87418669
ES.5914.27	chr11	+	4701	30	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	30.860739713235	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGTTGGGTGCCAGTTG	NA	False	NA	9	True	AATAAA	-15	NA	87295892	87446644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442359_87442467_87446309
ES.5914.28	chr11	+	4419	28	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	4	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	32.0545231662925	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295894	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.29	chr11	+	4540	29	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	4	4010	4	-3144	5prime_fragment	FALSE	canonical	1	19	junction_12	24.4296940009406	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGAGGGTTTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	87295894	87442639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356
ES.5914.3	chr11	+	4511	27	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-82	-1	combination_of_known_splicesites	FALSE	canonical	1	8	junction_26	30.1115529540038	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295808	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87446309
ES.5914.30	chr11	+	3818	24	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	10	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.7259365325681	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295900	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.31	chr11	+	4692	19	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	13	26553	13	-25687	5prime_fragment	FALSE	canonical	1	19	junction_12	23.0148234571859	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATATTTTCTTTATCTG	NA	False	NA	NA	False	NA	NA	NA	87295903	87420096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669
ES.5914.32	chr11	+	4450	28	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	35.910726070543	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295903	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87446309
ES.5914.33	chr11	+	4329	28	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	29.5970654386356	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTGGGTGCCAGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	87295903	87446645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.34	chr11	+	4223	27	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	22	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	30.0598023276324	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295912	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.35	chr11	+	7533	27	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	23	0	intron_retention	FALSE	canonical	1	18	junction_23	28.2018558707794	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295913	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.37	chr11	+	4572	29	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	32.0551979292862	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295924	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402457_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442355_87442467_87445753_87445806_87446309
ES.5914.38	chr11	+	4985	20	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	36	-25249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	28.0212622080818	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATGAATTGCTGA	NA	False	NA	NA	False	NA	NA	NA	87295926	87420534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87418858
ES.5914.39	chr11	+	4336	28	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	38	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.532438472661	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295928	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385826_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.4	chr11	+	4762	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-79	2	combination_of_known_splicesites	FALSE	canonical	1	11	junction_25	28.6387977613865	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295811	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.40	chr11	+	4820	32	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.6733230888973	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87295928	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87381121_87381207_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440246_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.41	chr11	+	146	1	Intergenic	novelGene_4754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATCATAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	87306409	87306555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87306400_87306600
ES.5914.42	chr11	+	177	1	Intergenic	novelGene_4755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGTTATCC	NA	False	NA	NA	False	NA	NA	NA	87310982	87311159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87311000_87311200
ES.5914.43	chr11	+	205	1	Intergenic	novelGene_4756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTGTATGTATATATA	NA	False	NA	NA	False	AAGAAA	-36	NA	87314656	87314861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87314700_87314900
ES.5914.44	chr11	+	189	1	Intergenic	novelGene_4758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTAGATTGCAA	NA	False	NA	NA	False	NA	NA	NA	87322985	87323174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87323000_87323200
ES.5914.45	chr11	+	177	1	Intergenic	novelGene_4759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTAAATTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	87323494	87323671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87323500_87323700
ES.5914.46	chr11	+	4873	31	NNC	ENSMUSG00000010342.17	novel	601	6	NA	NA	5659	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.7730220954798	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAGTTGGGTGCCAGTT	NA	False	NA	8	True	AATAAA	-14	NA	87324075	87446643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87324293_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402447_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.47	chr11	+	4538	30	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	6247	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	29.2162790775814	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTGGGTGCCAGTTGTG	NA	False	NA	11	True	AATAAA	-17	NA	87324663	87446646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387083_87388685_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.48	chr11	+	224	1	Intergenic	novelGene_4760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	87326157	87326381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87326200_87326400
ES.5914.49	chr11	+	1642	1	Intergenic	novelGene_4761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	87326531	87328173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87326500_87328200
ES.5914.5	chr11	+	5290	20	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-76	-25040	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	27.755262035101	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGAGAGTCGCCTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	87295814	87420743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87418874
ES.5914.50	chr11	+	142	1	Intergenic	novelGene_4764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	6228	False	NA	NA	False	NA	NA	NA	87337871	87338013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87337900_87338000
ES.5914.51	chr11	+	168	1	Intergenic	novelGene_4766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAACAAAAACAA	9253	False	NA	NA	False	NA	NA	NA	87340896	87341064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87340900_87341100
ES.5914.52	chr11	+	4651	1	Genic_Genomic	ENSMUSG00000083894.2	novel	NA	NA	NA	NA	-2877	394	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCATAGTACAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	87355627	87360278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_87355600_87360300
ES.5914.53	chr11	+	178	1	Genic_Genomic	ENSMUSG00000083894.2	novel	NA	NA	NA	NA	1375	173	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAATGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	87359879	87360057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_87359900_87360100
ES.5914.54	chr11	+	4383	28	NNC	ENSMUSG00000010342.17	novel	601	6	NA	NA	-53546	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.5495865838184	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	NA	False	NA	13	True	AATAAA	-19	NA	87374003	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87374061_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.55	chr11	+	4204	15	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-46504	-25688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.3432641317149	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATATTTTCTTTATCT	NA	False	NA	NA	False	NA	NA	NA	87381045	87420095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87381207_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669
ES.5914.56	chr11	+	4020	25	ISM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	89885	2	-41774	2	3prime_fragment	FALSE	canonical	1	19	junction_6	25.8439494315831	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87385775	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.57	chr11	+	5600	13	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-18863	-1	intron_retention	FALSE	canonical	2	11	junction_8	30.3859433876185	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	3605	False	NA	13	True	AATAAA	-19	NA	87408686	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.58	chr11	+	3731	14	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-17447	-1	intron_retention	FALSE	non_canonical	0	0	junction_10	31.4285137938456	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAGTTGGGTGCCAGTTG	5021	False	NA	9	True	AATAAA	-15	NA	87410102	87446644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434106_87434204_87440257_87440351_87442356_87442467_87445753
ES.5914.59	chr11	+	1985	17	NNC	ENSMUSG00000010342.17	novel	601	6	NA	NA	-17239	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.0419954548581	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	5229	False	NA	13	True	AATAAA	-19	NA	87410310	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87410346_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.6	chr11	+	4673	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	29.2016239184881	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295814	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.60	chr11	+	5299	5	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-7174	-15146	intron_retention	FALSE	canonical	3	84	junction_4	15.188400179084	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAATATCCCTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	87420375	87430637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821
ES.5914.61	chr11	+	4275	10	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-4194	-1	intron_retention	FALSE	canonical	3	84	junction_3	14.7196014438797	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGTGCCAGTTGTGAT	489	False	NA	13	True	AATAAA	-19	NA	87423355	87446648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.62	chr11	+	4468	3	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-3378	-15146	intron_retention	FALSE	canonical	3	84	junction_2	19.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAATATCCCTTTCAAT	1305	False	NA	NA	False	NA	NA	NA	87424171	87430637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87427727_87429391_87429489_87429821
ES.5914.63	chr11	+	6467	2	ISM	ENSMUSG00000010342.17	ENSMUST00000124255.2	658	5	4193	-157	4193	0	intron_retention	FALSE	canonical	3	124	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	4937	False	NA	14	True	AATAAA	-20	NA	87438176	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87440351_87442356
ES.5914.7	chr11	+	4798	31	NNC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-76	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	30.378647471904	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTGCCAGTTGTGA	NA	False	NA	12	True	AATAAA	-18	NA	87295814	87446647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390363_87390489_87400393_87400546_87402250_87402457_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5914.8	chr11	+	4666	29	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_25	27.8112029621892	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295815	87446649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ES.5915.1	chr11	-	178	1	Intergenic	novelGene_4741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7332	False	NA	NA	False	NA	NA	NA	87027077	87026899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87026900_87027100
ES.5916.1	chr11	-	2948	6	Antisense	novelGene_ENSMUSG00000018548.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	3965	False	NA	NA	False	NA	NA	NA	87041956	87027795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87028456_87031309_87031428_87033952_87034040_87036288_87036412_87037758_87037882_87040119
ES.5916.2	chr11	-	3406	2	Antisense	novelGene_ENSMUSG00000018548.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAGAGAAAGGAAAG	6919	False	NA	NA	False	NA	NA	NA	87039002	87034249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87036412_87037758
ES.5916.3	chr11	-	2403	2	Antisense	novelGene_ENSMUSG00000018548.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGTAAACTGGCT	6919	False	NA	NA	False	NA	NA	NA	87039002	87034900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87037258_87038956
ES.5917.1	chr11	-	157	1	Intergenic	novelGene_4742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	6588	False	NA	NA	False	NA	NA	NA	87067537	87067380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87067400_87067500
ES.5918.1	chr11	-	3444	1	Intergenic	novelGene_4744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAGAAAAGACAAAAAAA	NA	False	NA	NA	False	AATACA	-36	NA	87087104	87083660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87083700_87087100
ES.5918.2	chr11	-	501	1	Intergenic	novelGene_4745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAAGAATACTCAGCCA	1726	False	NA	NA	False	NA	NA	NA	87085040	87084539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87084500_87085000
ES.5919.1	chr11	-	3343	1	Antisense	novelGene_ENSMUSG00000018548.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAAAACGGGT	NA	False	NA	NA	False	NA	NA	NA	87111204	87107861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87107900_87111200
ES.592.1	chr1	+	2259	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	-37	1	-37	-1	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGGATTGTTTTGTT	NA	False	NA	27	True	AATAAA	-15	NA	60382444	60427218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ES.592.2	chr1	+	2037	11	NIC	ENSMUSG00000049439.14	novel	2056	12	NA	NA	-32	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	31.4498012712322	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGGATTGTTTTGTT	NA	False	NA	27	True	AATAAA	-15	NA	60382449	60427218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60382617_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ES.592.4	chr1	+	2124	13	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28.4717208627945	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGGATTGTTTTGT	NA	False	NA	26	True	AATAAA	-14	NA	60382476	60427217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60382617_60391279_60391330_60392169_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ES.592.5	chr1	+	2066	12	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.0659539795277	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGGATTGTTTTGT	NA	False	NA	26	True	AATAAA	-14	NA	60382478	60427217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60405807_60405887_60410379_60410496_60411748_60411804_60415215_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ES.592.6	chr1	+	1766	13	NNC	ENSMUSG00000049439.14	novel	2223	13	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	38.4219989068763	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGGATTGTTTTGTT	NA	False	NA	27	True	AATAAA	-15	NA	60382500	60427218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297_60426641_60426909
ES.592.8	chr1	+	3892	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGAAGGAAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60406297	60410189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60406300_60410200
ES.592.9	chr1	+	4992	4	NNC	ENSMUSG00000049439.14	novel	2056	12	NA	NA	33090	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.358101890391	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	5784	False	NA	28	True	AATAAA	-16	NA	60415571	60427219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60418895_60420970_60421628_60426063_60426154_60426297
ES.5920.1	chr11	-	6376	7	FSM	ENSMUSG00000046442.5	ENSMUST00000055438.5	6344	7	-25	-7	-25	7	multi-exon	FALSE	canonical	0	0	junction_6	1.69967317119759	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGTTATTTGTCTTATTC	NA	False	NA	NA	False	AATAAA	-19	NA	87249874	87117724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87122755_87127955_87128050_87128257_87128402_87131428_87131618_87135094_87135295_87139757_87139877_87249274
ES.5920.10	chr11	-	3406	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	22	516	5	-516	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTATACATCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	87295327	87267986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.11	chr11	-	3226	9	FSM	ENSMUSG00000007646.14	ENSMUST00000007790.11	1632	9	333	-1927	-98	-525	multi-exon	FALSE	canonical	0	0	junction_8	50.2120503465055	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCTGTGTGTGTATAC	NA	False	NA	NA	False	NA	NA	NA	87295447	87267995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295420
ES.5920.12	chr11	-	3636	9	NNC	ENSMUSG00000007646.14	novel	3944	9	NA	NA	25	-527	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	49.5700262255327	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACTCTGTGTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	87295307	87267997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87294868
ES.5920.13	chr11	-	1385	10	NNC	ENSMUSG00000007646.14	novel	2061	10	NA	NA	10	-530	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	47.9655225972228	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAAGACTCTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	87295322	87268000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87268192_87270193_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.14	chr11	-	1817	10	NNC	ENSMUSG00000007646.14	novel	2061	10	NA	NA	18	37	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	45.5338701774112	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGTGTATATGTATCTG	NA	False	NA	-1	True	AATAAA	-19	NA	87295314	87269379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87270011_87270193_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.15	chr11	-	2029	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	5	1910	5	36	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTGTATATGTATCT	NA	False	NA	-2	True	AATAAA	-18	NA	87295344	87269380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.16	chr11	-	2169	9	FSM	ENSMUSG00000007646.14	ENSMUST00000007790.11	1632	9	5	-542	5	36	multi-exon	FALSE	canonical	0	0	junction_8	50.2120503465055	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTGTATATGTATCT	NA	False	NA	-2	True	AATAAA	-18	NA	87295775	87269380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295420
ES.5920.17	chr11	-	1817	8	FSM	ENSMUSG00000007646.14	ENSMUST00000129400.2	938	8	-51	-828	32	35	multi-exon	FALSE	canonical	0	0	junction_6	53.4946115920824	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTGTGTATATGTATC	NA	False	NA	-3	True	AATAAA	-17	NA	87295300	87269381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87293423_87293683_87295129
ES.5920.18	chr11	-	4148	7	ISM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	4067	-34	3984	34	3prime_fragment	FALSE	canonical	3	11	junction_2	66.2128302437593	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGTGTGTATATGTAT	2789	False	NA	-4	True	AATAAA	-16	NA	87291265	87269382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449
ES.5920.19	chr11	-	3046	8	NIC	ENSMUSG00000007646.14	novel	3944	9	NA	NA	10	34	intron_retention	FALSE	canonical	3	130	junction_1	12.9772170847723	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGTGTGTATATGTAT	NA	False	NA	-4	True	AATAAA	-16	NA	87295322	87269382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87293683_87295129
ES.5920.2	chr11	-	4921	7	FSM	ENSMUSG00000046442.5	ENSMUST00000055438.5	6344	7	-25	1448	-25	-1448	multi-exon	FALSE	canonical	0	0	junction_6	1.69967317119759	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGGTATAGTCTGTGA	NA	False	NA	NA	False	TATAAA	-31	NA	87249874	87119179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87122755_87127955_87128050_87128257_87128402_87131428_87131618_87135094_87135295_87139757_87139877_87249274
ES.5920.20	chr11	-	2019	9	NNC	ENSMUSG00000007646.14	novel	3944	9	NA	NA	10	34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.7799361507747	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGTGTGTATATGTAT	NA	False	NA	-4	True	AATAAA	-16	NA	87295322	87269382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87270308_87271653_87271719_87279444_87279506_87280659_87280727_87286091_87286240_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.21	chr11	-	2084	10	FSM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	10	-33	10	33	multi-exon	FALSE	canonical	3	11	junction_2	58.9867112048589	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTGTGTGTATATGTA	NA	False	NA	-5	True	AATAAA	-15	NA	87295322	87269383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.24	chr11	-	1445	9	NNC	ENSMUSG00000007646.14	novel	3944	9	NA	NA	29	-7633	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	64.6624649622948	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTCTTTCAAGTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	87295303	87277842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87278214_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ES.5920.25	chr11	-	200	1	Intergenic	novelGene_4757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATACCTTCCCAGTGAA	2253	False	NA	NA	False	NA	NA	NA	87322814	87322614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87322600_87322800
ES.5920.26	chr11	-	233	1	Intergenic	novelGene_4762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGCCGTCTGTATATC	6293	False	NA	NA	False	NA	NA	NA	87336584	87336351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87336400_87336600
ES.5920.27	chr11	-	510	1	Intergenic	novelGene_4763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACAAACTTATCTCCAC	5593	False	NA	NA	False	AAAACA	-9	NA	87337284	87336774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87336800_87337300
ES.5920.28	chr11	-	1049	1	Antisense	novelGene_ENSMUSG00000119648.1_AS_novelGene_ENSMUSG00002075453.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATATTACATGAGTGGACC	3135	False	NA	NA	False	NA	NA	NA	87339742	87338693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87338700_87339700
ES.5920.29	chr11	-	175	1	Intergenic	novelGene_4765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATATTTCTTATGTGC	2361	False	NA	NA	False	NA	NA	NA	87340516	87340341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87340300_87340500
ES.5920.3	chr11	-	4418	7	FSM	ENSMUSG00000046442.5	ENSMUST00000055438.5	6344	7	100	1826	100	-1826	multi-exon	FALSE	canonical	0	0	junction_6	1.69967317119759	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTTCATTTGTTCACAA	NA	False	NA	NA	False	AATAAA	-16	NA	87249749	87119557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87122755_87127955_87128050_87128257_87128402_87131428_87131618_87135094_87135295_87139757_87139877_87249274
ES.5920.30	chr11	-	857	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	87344430	87343356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87343868_87344084
ES.5920.31	chr11	-	176	1	Intergenic	novelGene_4767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	87343739	87343563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87343600_87343700
ES.5920.4	chr11	-	1907	1	NIC	ENSMUSG00000046442.5	novel	6344	7	NA	NA	114257	591	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAACCA	NA	False	NA	NA	False	NA	NA	NA	87135206	87133299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_87133300_87135200
ES.5920.5	chr11	-	176	2	Antisense	novelGene_ENSMUSG00002075453.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTAAGCGGCCAA	NA	False	NA	NA	False	NA	NA	NA	87343740	87152661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87152694_87343596
ES.5920.6	chr11	-	188	1	Intergenic	novelGene_4749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTGGGAGGGGCCT	NA	False	NA	-9	True	NA	NA	NA	87226233	87226045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87226000_87226200
ES.5920.7	chr11	-	2550	1	NIC	ENSMUSG00000046442.5	novel	6344	7	NA	NA	105	-113304	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAGGAGAATCAGGATC	NA	False	NA	NA	False	NA	NA	NA	87249744	87247194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_87247200_87249700
ES.5920.8	chr11	-	268	1	Intergenic	novelGene_4750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAGAGCTTAGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	87260223	87259955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87260000_87260200
ES.5920.9	chr11	-	157	1	Intergenic	novelGene_4751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAACCTAAA	NA	False	NA	NA	False	NA	NA	NA	87260223	87260066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87260100_87260200
ES.5921.1	chr11	-	2391	1	Antisense	novelGene_ENSMUSG00000119851.1_AS_novelGene_ENSMUSG00002074955.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGAGTGGTGGTGGCACA	5446	False	NA	NA	False	AAAAAG	-43	NA	87353643	87351252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87351300_87353600
ES.5922.1	chr11	-	6078	1	Intergenic	novelGene_4768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAAATTTGATAAAGCT	NA	False	NA	NA	False	NA	NA	NA	87372209	87366131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87366100_87372200
ES.5922.2	chr11	-	5062	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTCTTAGCTGCATCA	NA	False	NA	NA	False	NA	NA	NA	87373951	87368782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87373748_87373854
ES.5922.3	chr11	-	5046	1	Intergenic	novelGene_4769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	87373830	87368784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87368800_87373800
ES.5922.4	chr11	-	586	4	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCCTGTCTTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	87373920	87368786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87369013_87370717_87370815_87373550_87373748_87373854
ES.5922.5	chr11	-	4994	2	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGCCTGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	87373830	87368788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87370269_87370316
ES.5922.6	chr11	-	81	1	Intergenic	novelGene_4770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCCTGTCTTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	87373870	87373789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87373800_87373900
ES.5923.1	chr11	-	178	1	Intergenic	novelGene_4771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGGAAGCAAGAGAAA	NA	False	NA	1	True	NA	NA	NA	87374931	87374753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87374800_87374900
ES.5924.1	chr11	-	3044	1	Antisense	novelGene_ENSMUSG00000010342.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	87378977	87375933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87375900_87379000
ES.5925.1	chr11	-	183	1	Intergenic	novelGene_4772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGGGTTTTTTTTTT	7443	False	NA	1	True	NA	NA	NA	87397044	87396861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87396900_87397000
ES.5926.1	chr11	+	1472	12	NNC	ENSMUSG00000020486.20	novel	560	5	NA	NA	766	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.18560277821297	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGTGTCTCTGTATTT	2130	False	NA	5	True	AATAAA	-16	NA	87473800	87481364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87473983_87474143_87474191_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480781_87480882_87481141
ES.5926.2	chr11	+	2597	1	NIC	ENSMUSG00000020486.20	novel	3229	14	NA	NA	-1127	663	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATATGATAGCAGAGGAA	3253	False	NA	NA	False	NA	NA	NA	87474923	87477520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87474900_87477500
ES.5927.1	chr11	+	5774	19	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-191	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9348049597212	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGTCTTTTTATTTCT	NA	False	NA	22	True	AATAAA	-22	NA	87482796	87507130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87482905_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.11	chr11	+	5154	20	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	35.9544186659533	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGGTCTTTTTATTTC	NA	False	NA	21	True	AATAAA	-21	NA	87483040	87507129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901_87506344_87506890
ES.5927.12	chr11	+	5401	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	53	299	-4	-299	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAGTTTTCATTGCACT	NA	False	NA	NA	False	ATTAAA	-31	NA	87483040	87506829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.13	chr11	+	5818	20	NIC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	2	-5	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	38.4952419983262	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87483046	87507123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87483077_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.14	chr11	+	5195	19	FSM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	-524	-7	-91	7	multi-exon	FALSE	canonical	3	10	junction_1	32.1891113404656	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCCCATGTTGTCTTT	NA	False	NA	10	True	AATAAA	-23	NA	87483198	87506005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.15	chr11	+	5457	21	NNC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	-85	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.7782034029951	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	14	True	AATAAA	-14	NA	87483204	87507122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87483422_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901_87506344_87506890
ES.5927.16	chr11	+	5600	20	NIC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	9	-316	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.6966335434309	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGGCTTTTTAATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	87483298	87506812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87483422_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.17	chr11	+	5632	20	NNC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	43	-5	intron_retention	FALSE	non_canonical	0	0	junction_19	39.6966335434309	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87483332	87507123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901_87506344_87506890
ES.5927.18	chr11	+	4804	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	-81	9	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCCATGTTGTCTTTCC	NA	False	NA	12	True	AATAAA	-25	NA	87486396	87506007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.19	chr11	+	5917	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	-75	-2	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTGGGTCTTTTTAT	NA	False	NA	18	True	AATAAA	-18	NA	87486402	87507126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.2	chr11	+	5875	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	-123	1	-123	-1	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGGGTCTTTTTATT	NA	False	NA	19	True	AATAAA	-19	NA	87482864	87507127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.20	chr11	+	5291	19	NNC	ENSMUSG00000018401.18	novel	792	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	34.7337314258839	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	14	True	AATAAA	-14	NA	87486477	87507122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901_87506344_87506890
ES.5927.21	chr11	+	4353	16	NNC	ENSMUSG00000018401.18	novel	792	7	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	37.6209161681814	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCACTTCCCCCATGTTG	NA	False	NA	5	True	AATAAA	-18	NA	87486481	87506000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491688_87493644_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.22	chr11	+	2415	14	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	30	-3971	intron_retention	FALSE	canonical	3	49	junction_1	20.0159699553741	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTTGTTCTCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	87486507	87502027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495977_87501758
ES.5927.23	chr11	+	4530	17	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	4256	2	1501	-2	3prime_fragment	FALSE	canonical	3	92	junction_7	17.2951176275271	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCCACTTCCCCCAT	NA	False	NA	1	True	AATAAA	-14	NA	87487978	87505996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.24	chr11	+	5524	15	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	4026	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.9546516304753	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTGGGTCTTTTTAT	NA	False	NA	18	True	AATAAA	-18	NA	87490503	87507126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87490701_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.26	chr11	+	4066	4	NIC	ENSMUSG00000018401.18	novel	5525	18	NA	NA	9474	-9	intron_retention	FALSE	canonical	3	123	junction_1	13.8884444373331	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCTTTGTTGGGTC	NA	False	NA	11	True	AATAAA	-11	NA	87495951	87507119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87495977_87501758_87503143_87504247_87504687_87504901
ES.5927.27	chr11	+	1580	1	Intergenic	novelGene_4773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGAGTACTTAGAGT	NA	False	NA	NA	False	NA	NA	NA	87499263	87500843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87499300_87500800
ES.5927.28	chr11	+	3294	1	NIC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	17351	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTTGTTGGGTCTTT	NA	False	NA	14	True	AATAAA	-14	NA	87503828	87507122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87503800_87507100
ES.5927.3	chr11	+	4694	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	-63	1122	-63	8	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCCATGTTGTCTTTC	NA	False	NA	11	True	AATAAA	-24	NA	87482924	87506006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.4	chr11	+	5837	20	NIC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	39.5492609832514	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGGTCTTTTTATTT	NA	False	NA	20	True	AATAAA	-20	NA	87482961	87507128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87483077_87483723_87483782_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.5	chr11	+	5722	19	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9348049597212	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCTTTT	NA	False	NA	15	True	AATAAA	-15	NA	87482972	87507123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87483036_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.6	chr11	+	4742	20	NIC	ENSMUSG00000018401.18	novel	4664	19	NA	NA	16	6	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	38.4952419983262	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCCCCCATGTTGTCTT	NA	False	NA	9	True	AATAAA	-22	NA	87483003	87506004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87483077_87483723_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.8	chr11	+	5310	16	NIC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-21	80	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	47.3912321942455	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTACACCGAGTACTG	NA	False	NA	100	True	GATAAA	-22	NA	87483023	87507208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491599_87491697_87491884_87491999_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5927.9	chr11	+	5696	19	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	-20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.121833805719	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTGGGTCTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	87483024	87507124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87483077_87484214_87484264_87488041_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ES.5928.1	chr11	+	3680	5	NIC	ENSMUSG00000070345.4	novel	4158	6	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.32290411644765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCTTGGTTGTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	87507945	87550368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87508732_87513570_87513946_87522417_87522516_87528895_87529071_87548122
ES.5928.2	chr11	+	4196	6	FSM	ENSMUSG00000070345.4	ENSMUST00000093956.4	4158	6	-39	1	-39	-1	multi-exon	FALSE	canonical	0	0	junction_1	4.19523539268061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTGTCTTGGTTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	87507950	87550367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87508732_87513570_87513946_87522417_87522516_87526436_87526959_87528895_87529071_87548122
ES.5928.3	chr11	+	3781	6	NNC	ENSMUSG00000070345.4	novel	4158	6	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.35430821141545	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGACTCTTGTCTTGGTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	87507983	87550364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87508732_87513570_87513946_87522417_87522516_87526815_87526959_87528895_87529071_87548122
ES.5929.1	chr11	-	176	1	Intergenic	novelGene_4774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATATTATGATGA	NA	False	NA	NA	False	NA	NA	NA	87518937	87518761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87518800_87518900
ES.593.1	chr1	-	186	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGGATGAAAGCGGCC	NA	False	NA	NA	False	AATAAA	-6	NA	60399627	60399441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60399400_60399600
ES.5930.1	chr11	+	4306	10	FSM	ENSMUSG00000034177.16	ENSMUST00000165679.8	4310	10	2	2	2	-2	multi-exon	FALSE	canonical	0	0	junction_1	0.831479419283098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGGCTTTGTGGTTTT	NA	False	NA	NA	False	CATAAA	-3	NA	87553914	87626362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87554049_87554961_87555694_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852_87623212_87624981
ES.5930.2	chr11	+	3666	9	NNC	ENSMUSG00000034177.16	novel	3670	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.661437827766148	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTTGTGGTTTTGTT	6778	False	NA	NA	False	CATAAA	-6	NA	87590722	87626365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87590950_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621057_87621852_87623212_87624981
ES.5930.3	chr11	+	4845	3	FSM	ENSMUSG00000034177.16	ENSMUST00000124625.2	378	3	-44	-4423	-44	-2	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGGCTTTGTGGTTTT	2900	False	NA	NA	False	CATAAA	-3	NA	87620155	87626362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87620388_87620957_87621061_87621852
ES.5931.1	chr11	+	735	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	-19	-10	-19	4	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGCCTGTGCCTTGTG	NA	False	NA	12	True	AATAAA	-29	NA	87628358	87634453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ES.5931.2	chr11	+	2800	4	NNC	ENSMUSG00000020485.15	novel	706	5	NA	NA	12	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	269.171981371679	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAGGGTACTGAGGCC	NA	False	NA	1	True	AATAAA	-18	NA	87628390	87634442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87628495_87628992_87629930_87630182_87631229_87633729
ES.5931.3	chr11	+	1444	5	NNC	ENSMUSG00000020485.15	novel	854	6	NA	NA	12	755	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	232.502688156503	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87628390	87635204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87628485_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ES.5931.5	chr11	+	612	5	NNC	ENSMUSG00000020485.15	novel	706	5	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	229.915745437323	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAGGGTACTGAGGCC	NA	False	NA	1	True	AATAAA	-18	NA	87628395	87634442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87628420_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ES.5931.7	chr11	+	1626	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	31	-951	30	945	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTACTGTGTAAAGTT	NA	False	NA	NA	False	AGTAAA	-12	NA	87628408	87635394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ES.5931.8	chr11	+	5818	2	Genic_Genomic	ENSMUSG00000020485.15	novel	706	5	NA	NA	788	795	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGTACATAGCT	NA	False	NA	NA	False	NA	NA	NA	87629166	87635244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_87629930_87630189
ES.5931.9	chr11	+	2382	3	ISM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	3338	6	3337	-6	3prime_fragment	FALSE	canonical	3	512	junction_1	9	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTTAAAGGGTACTG	NA	False	NA	-4	True	AATAAA	-13	NA	87631715	87634437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87633678_87633883_87633938_87634071
ES.5932.1	chr11	+	5106	26	NIC	ENSMUSG00000034156.17	novel	2367	12	NA	NA	-42	-4	intron_retention	TRUE	canonical	0	0	junction_1	2.01434852992227	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGCTGGGCTCTGCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	87655514	87676750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87655661_87656453_87656532_87656618_87656703_87656938_87657029_87657191_87657315_87657542_87657648_87659255_87659307_87660503_87660709_87661236_87661410_87662484_87662601_87662882_87662993_87665349_87666181_87666327_87666480_87666798_87667165_87667250_87667491_87667872_87668062_87670054_87670155_87670250_87670403_87671028_87671198_87671707_87671780_87672127_87672161_87672315_87672420_87672507_87672580_87672770_87672876_87673485_87673537_87675561
ES.5932.2	chr11	+	2512	8	NIC	ENSMUSG00000034156.17	novel	3514	10	NA	NA	-151	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.16057691494799	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGGCTCTGCCTGG	6746	False	NA	NA	False	AATAAA	-18	NA	87669467	87676751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87670155_87670250_87670403_87671028_87671198_87671707_87671780_87672127_87672161_87672315_87672420_87672770_87672876_87675561
ES.5933.1	chr11	-	206	1	Antisense	novelGene_ENSMUSG00000009350.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	87685344	87685138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87685100_87685300
ES.5934.1	chr11	+	3926	17	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5066	1	intron_retention	FALSE	canonical	1	1	junction_9	51.9998497593983	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGACTCTCGTTCT	1390	False	NA	19	True	TATAAA	-21	NA	87738974	87754630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750339_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.10	chr11	+	3021	17	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5016	-1	intron_retention	FALSE	canonical	3	61	junction_1	32.4595902623554	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1440	False	NA	17	True	TATAAA	-19	NA	87739024	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.11	chr11	+	2688	19	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-5012	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.9924235901289	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTCTGTGGACTCTC	1444	False	NA	14	True	TATAAA	-16	NA	87739028	87754625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87743873_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.12	chr11	+	3964	18	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-5012	0	intron_retention	FALSE	canonical	1	1	junction_10	59.1428392328771	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1444	False	NA	18	True	TATAAA	-20	NA	87739028	87754629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87743873_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750339_87750440_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.13	chr11	+	4157	15	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5010	-1	intron_retention	FALSE	canonical	2	6	junction_1	47.4028006578101	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1446	False	NA	17	True	TATAAA	-19	NA	87739030	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739153_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.14	chr11	+	3099	16	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5009	-3	intron_retention	FALSE	canonical	3	46	junction_5	45.3081302490697	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	1447	False	NA	15	True	TATAAA	-17	NA	87739031	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.15	chr11	+	2491	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5000	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	51.4347774582522	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	1456	False	NA	15	True	TATAAA	-17	NA	87739040	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739153_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.16	chr11	+	4672	15	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-4995	-5	intron_retention	FALSE	canonical	2	6	junction_1	55.2794846988594	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTCTGTGGACTCT	1461	False	NA	13	True	TATAAA	-15	NA	87739045	87754624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739153_87744562_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87753477_87753566_87753665_87753762
ES.5934.17	chr11	+	2376	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-4995	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4731634455972	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTCTGTGGACTCT	1461	False	NA	13	True	TATAAA	-15	NA	87739045	87754624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739153_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.18	chr11	+	2543	17	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-4961	-3	intron_retention	FALSE	canonical	2	6	junction_1	44.4211028116142	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	1495	False	NA	15	True	TATAAA	-17	NA	87739079	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739153_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.19	chr11	+	3629	17	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	107	junction_1	23.366308544569	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	6454	False	NA	15	True	TATAAA	-17	NA	87744038	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.2	chr11	+	4588	15	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5064	-4	intron_retention	FALSE	canonical	3	46	junction_5	46.5416206097251	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCTCTGTGGACTCTC	1392	False	NA	14	True	TATAAA	-16	NA	87738976	87754625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.20	chr11	+	4473	14	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	46	junction_5	42.4370051757193	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6457	False	NA	18	True	TATAAA	-20	NA	87744041	87754629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.21	chr11	+	3550	16	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	1	-3	intron_retention	FALSE	canonical	3	46	junction_5	38.9934467428681	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	6457	False	NA	15	True	TATAAA	-17	NA	87744041	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87753477_87753566_87753665_87753762
ES.5934.23	chr11	+	5276	14	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	1	-5	intron_retention	FALSE	canonical	3	107	junction_1	25.528264878215	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTCTGTGGACTCT	6457	False	NA	13	True	TATAAA	-15	NA	87744041	87754624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.24	chr11	+	3111	17	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	1	5	intron_retention	FALSE	canonical	3	107	junction_1	23.653422056861	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTCTCGTTCTCTCT	6457	False	NA	23	True	TATAAA	-25	NA	87744041	87754634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.25	chr11	+	4137	14	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	6	-2	intron_retention	FALSE	canonical	3	107	junction_1	25.9649285535874	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTCTGTGGACTCTCGT	6462	False	NA	16	True	TATAAA	-18	NA	87744046	87754627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87749486_87750440_87750484_87750902_87750969_87751539_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.26	chr11	+	4472	15	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-3	0	intron_retention	FALSE	canonical	3	107	junction_1	24.4236628318205	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6465	False	NA	18	True	TATAAA	-20	NA	87744049	87754629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.27	chr11	+	3805	15	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	2	-1	intron_retention	FALSE	canonical	3	107	junction_1	25.1221505643842	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	6470	False	NA	17	True	TATAAA	-19	NA	87744054	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.28	chr11	+	6779	11	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	4	-3	intron_retention	FALSE	canonical	2	5	junction_7	58.1260698826267	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	6472	False	NA	15	True	TATAAA	-17	NA	87744056	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87750480_87750902_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.29	chr11	+	4995	12	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	4	0	intron_retention	FALSE	canonical	3	46	junction_5	45.3387616260648	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6472	False	NA	18	True	TATAAA	-20	NA	87744056	87754629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87749486_87750440_87750969_87751539_87753477_87753566_87753665_87753762
ES.5934.3	chr11	+	2629	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5064	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.1427029331232	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGACTCTCGTTCTC	1392	False	NA	20	True	TATAAA	-22	NA	87738976	87754631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745638_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.30	chr11	+	4757	14	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	6	0	intron_retention	FALSE	canonical	3	107	junction_1	25.7945914242804	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6474	False	NA	18	True	TATAAA	-20	NA	87744058	87754629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.32	chr11	+	4035	16	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	8	-7	intron_retention	FALSE	canonical	3	107	junction_1	24.2052335938601	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCCTCTGTGGACT	6476	False	NA	11	True	TATAAA	-13	NA	87744060	87754622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.33	chr11	+	4060	16	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	8	-3	intron_retention	FALSE	canonical	0	0	junction_5	49.2580506674346	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	6476	False	NA	15	True	TATAAA	-17	NA	87744060	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747508_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.34	chr11	+	4688	12	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	8	-3	intron_retention	FALSE	canonical	3	107	junction_1	26.1653988919251	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	6476	False	NA	15	True	TATAAA	-17	NA	87744060	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747763_87748012_87748118_87748686_87749486_87750440_87750969_87751539_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.37	chr11	+	4127	15	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	15	5	intron_retention	FALSE	canonical	3	46	junction_5	40.8960853373323	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTCTCGTTCTCTCT	6483	False	NA	23	True	TATAAA	-25	NA	87744067	87754634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.38	chr11	+	2627	18	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	53.2407861970397	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTCTGTGGACTCT	6486	False	NA	13	True	TATAAA	-15	NA	87744070	87754624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87744156_87744562_87744673_87745638_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.39	chr11	+	5101	12	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	26	1	intron_retention	FALSE	canonical	0	0	junction_7	63.612203205786	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGGACTCTCGTTCT	6494	False	NA	19	True	TATAAA	-21	NA	87744078	87754630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750902_87750969_87751539_87751611_87751935_87753477_87753566_87753665_87753762
ES.5934.4	chr11	+	2588	19	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-5055	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	44.1900008241628	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGACTCTCGTTCTCTC	1401	False	NA	22	True	TATAAA	-24	NA	87738985	87754633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744024_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.40	chr11	+	4024	12	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	1328	-3	intron_retention	FALSE	canonical	3	46	junction_3	41.5417742551334	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	619	False	NA	15	True	TATAAA	-17	NA	87745818	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87753477_87753566_87753665_87753762
ES.5934.41	chr11	+	3603	11	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	147	-7	intron_retention	FALSE	canonical	3	152	junction_4	16.4365446490435	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGATCCTCTGTGGACT	2336	False	NA	11	True	TATAAA	-13	NA	87747535	87754622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.42	chr11	+	2243	5	NIC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	-1105	-3	intron_retention	FALSE	canonical	3	161	junction_1	17.4427635425124	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	454	False	NA	15	True	TATAAA	-17	NA	87751657	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.5	chr11	+	6355	11	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5030	-3	intron_retention	FALSE	canonical	3	46	junction_4	54.3981617336468	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCTGTGGACTCTCG	1426	False	NA	15	True	TATAAA	-17	NA	87739010	87754626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750484_87750902_87753477_87753566_87753665_87753762
ES.5934.6	chr11	+	2422	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5025	-1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1431	False	NA	17	True	TATAAA	-19	NA	87739015	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.7	chr11	+	5242	14	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5024	-1	intron_retention	FALSE	canonical	3	61	junction_1	35.1360837131605	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1432	False	NA	17	True	TATAAA	-19	NA	87739016	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87745875_87746297_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.8	chr11	+	2309	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5024	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	51.3272283978007	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1432	False	NA	17	True	TATAAA	-19	NA	87739016	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5934.9	chr11	+	3264	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5016	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	57.2046045524914	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCTGTGGACTCTCGTT	1440	False	NA	17	True	TATAAA	-19	NA	87739024	87754628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87750339_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ES.5935.2	chr11	-	1776	6	ISM	ENSMUSG00000052234.3	ENSMUST00000049768.4	2689	13	5224	-1	1456	1	3prime_fragment	FALSE	canonical	2	6	junction_4	6.99714227381436	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCTGTCTCTCTGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	87761138	87754824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_87755231_87755520_87755734_87756230_87756469_87759376_87759548_87760072_87760329_87760646
ES.5936.1	chr11	+	224	1	Intergenic	novelGene_4775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGATACAGTTTTCAC	5245	False	NA	NA	False	NA	NA	NA	87769962	87770186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87770000_87770200
ES.5937.1	chr11	-	175	1	Intergenic	novelGene_4776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAGATTGACTGAT	9208	False	NA	NA	False	NA	NA	NA	87791892	87791717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87791700_87791900
ES.5938.1	chr11	-	170	1	Intergenic	novelGene_4777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGCA	7465	False	NA	NA	False	NA	NA	NA	87793635	87793465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87793500_87793600
ES.5939.1	chr11	-	157	1	Intergenic	novelGene_4778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAATATA	NA	False	NA	NA	False	NA	NA	NA	87853856	87853699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87853700_87853900
ES.594.10	chr1	+	6603	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-48	-787	-48	787	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTGTGTGTTCATA	NA	False	NA	6	True	AATACA	-17	NA	60448729	60521104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.11	chr1	+	4628	11	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-45	185	intron_retention	FALSE	canonical	3	7	junction_6	65.8510440312073	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTCCTACAGTATTTT	NA	False	NA	5	True	AATAAA	-15	NA	60448732	60518862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60489229_60489413_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.12	chr1	+	4172	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-37	1633	-37	7	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACATGTCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	60448740	60518684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.14	chr1	+	4439	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-217	-2551	-33	191	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACAGTATTTTCCTTTT	NA	False	NA	11	True	AATAAA	-21	NA	60448744	60518868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.15	chr1	+	6380	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-211	-4498	-27	498	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGGTGTCTAAAAATAA	NA	False	NA	NA	False	AATAAA	-21	NA	60448750	60520815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.16	chr1	+	4613	10	NNC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.3232035695129	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448759	60520317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898_60515992_60517161
ES.594.17	chr1	+	2414	2	FSM	ENSMUSG00000026782.16	ENSMUST00000189649.2	362	2	-171	-1881	18	1881	multi-exon	FALSE	canonical	3	161	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTTCTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	60448795	60475532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401
ES.594.18	chr1	+	1448	4	ISM	ENSMUSG00000026782.16	ENSMUST00000188594.7	1658	9	-54	32280	22	30	5prime_fragment	FALSE	canonical	3	152	junction_2	13.0213499897497	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAGAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	60448799	60483967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143
ES.594.19	chr1	+	4176	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-161	-2344	23	-16	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60448800	60518661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.2	chr1	+	4387	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-68	1449	-68	191	multi-exon	TRUE	canonical	3	110	junction_7	24.0559244262198	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACAGTATTTTCCTTTT	NA	False	NA	11	True	AATAAA	-21	NA	60448709	60518868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.20	chr1	+	4467	10	NNC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	30	189	intron_retention	FALSE	canonical	3	7	junction_6	66.411177104795	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTACAGTATTTTCCTT	NA	False	NA	9	True	AATAAA	-19	NA	60448807	60518866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60489229_60489413_60492762_60492922_60509824_60509999_60515898
ES.594.22	chr1	+	5570	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	40	158	-36	-158	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGAGCAGACAACTGT	NA	False	NA	NA	False	AGTAAA	-13	NA	60448817	60520159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.25	chr1	+	5918	11	NNC	ENSMUSG00000026782.16	novel	1671	10	NA	NA	-26	0	intron_retention	FALSE	canonical	0	0	junction_3	65.1046081318366	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448827	60520317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60477350_60477464_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.26	chr1	+	6249	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	62	-543	-14	543	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAGGGTTTGGATTCA	NA	False	NA	NA	False	AATAAA	-25	NA	60448839	60520860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.27	chr1	+	4096	8	NIC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-9	182	intron_retention	FALSE	canonical	0	0	junction_4	56.2160555176115	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTCTCCTACAGTAT	NA	False	NA	2	True	AATAAA	-12	NA	60448844	60518859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.29	chr1	+	5677	9	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-19	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	62.7987858162879	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	14	True	AATAAA	-16	NA	60448873	60520316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60449079_60473401_60473570_60476205_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.30	chr1	+	5918	11	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	2	-3	intron_retention	FALSE	canonical	3	7	junction_6	65.8510440312073	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTGTCTTGTAGA	NA	False	NA	12	True	AATAAA	-14	NA	60448894	60520314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60489229_60489413_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.31	chr1	+	6133	1	NIC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	-266	30	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAGAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	60477834	60483967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60477800_60484000
ES.594.32	chr1	+	3854	6	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	8317	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	52.85830114561	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTGTCTTGTAGAAT	NA	False	NA	14	True	AATAAA	-16	NA	60486417	60520316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898_60515992_60517161
ES.594.33	chr1	+	3390	5	ISM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	37640	1635	8317	5	3prime_fragment	FALSE	canonical	3	110	junction_3	17.4553000547112	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGACATGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	60486417	60518682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.34	chr1	+	5022	5	ISM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	37640	3	8317	-3	3prime_fragment	FALSE	canonical	3	110	junction_3	17.4553000547112	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTGTCTTGTAGA	NA	False	NA	12	True	AATAAA	-14	NA	60486417	60520314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.35	chr1	+	5794	4	ISM	ENSMUSG00000026782.16	ENSMUST00000187400.7	763	6	10889	-5173	9154	935	3prime_fragment	FALSE	canonical	3	110	junction_2	18.7082869338697	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGAAGTCTATAAGC	NA	False	NA	NA	False	TATAAA	-19	NA	60487254	60521252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.36	chr1	+	4681	3	ISM	ENSMUSG00000026782.16	ENSMUST00000186097.7	1356	10	27314	-4073	25584	-2	3prime_fragment	FALSE	canonical	3	39	junction_1	43	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAGTGTCTTGTAGAA	NA	False	NA	13	True	AATAAA	-15	NA	60503684	60520315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_60503775_60509824_60509999_60515898
ES.594.37	chr1	+	4415	1	NIC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	37797	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTGCAGTGTCTTGTA	NA	False	NA	10	True	AATAAA	-12	NA	60515897	60520312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60515900_60520300
ES.594.38	chr1	+	3200	2	NNC	ENSMUSG00000026782.16	novel	1403	8	NA	NA	37804	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATATTGCAGTGTCTTG	NA	False	NA	8	True	AATAAA	-10	NA	60515904	60520310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60517947_60519152
ES.594.39	chr1	+	3001	2	NNC	ENSMUSG00000026782.16	novel	5768	9	NA	NA	39127	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60517227	60520317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60519815_60519903
ES.594.4	chr1	+	5921	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-250	-4000	-66	0	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448711	60520317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.5	chr1	+	5833	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	-63	-2	-63	2	multi-exon	FALSE	canonical	3	110	junction_7	24.0559244262198	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTCTTGTAGAATCAT	NA	False	NA	17	True	AATAAA	-19	NA	60448714	60520319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ES.594.6	chr1	+	6004	10	NNC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-59	-3	intron_retention	FALSE	canonical	3	7	junction_6	66.411177104795	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTGTCTTGTAGA	NA	False	NA	12	True	AATAAA	-14	NA	60448718	60520314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60489229_60489413_60492762_60492922_60509824_60509999_60515898
ES.594.7	chr1	+	5733	9	NIC	ENSMUSG00000026782.16	novel	1671	10	NA	NA	-58	-3	intron_retention	FALSE	canonical	0	0	junction_2	61.2891456540226	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCAGTGTCTTGTAGA	NA	False	NA	12	True	AATAAA	-14	NA	60448719	60520314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60449079_60473401_60473570_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ES.594.8	chr1	+	4365	10	NIC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	-49	5	intron_retention	FALSE	canonical	3	7	junction_6	60.5764489949643	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGACATGTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	60448728	60518682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60489229_60489413_60492762_60492922_60509824_60509999_60515898
ES.5940.1	chr11	-	176	1	Intergenic	novelGene_4779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGGAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	87864574	87864398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87864400_87864600
ES.5941.1	chr11	-	2450	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	25	1	25	-1	multi-exon	FALSE	canonical	3	615	junction_2	8	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGGGTTTCTTTGG	NA	False	NA	-1	True	ATTAAA	-21	NA	87878334	87870351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87872397_87874697_87874837_87878068
ES.5941.10	chr11	-	656	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44250	-1108	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	289.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87922609	87872088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87922400
ES.5941.11	chr11	-	470	3	NNC	ENSMUSG00000020483.15	novel	2476	3	NA	NA	30	-1109	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	300	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTAGTTGCCTGG	NA	False	NA	-25	True	AGTAAA	-15	NA	87878329	87872089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87878305
ES.5941.12	chr11	-	287	1	Intergenic	novelGene_4780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGAAATACTTATTT	NA	False	NA	NA	False	NA	NA	NA	87891608	87891321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87891300_87891600
ES.5941.13	chr11	-	487	2	Intergenic	novelGene_4781	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGGTGGAATCATTT	NA	False	NA	NA	False	NA	NA	NA	87922672	87892623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87892839_87922400
ES.5941.14	chr11	-	592	2	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	16191	9	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTATGGAAGTGTGC	NA	False	NA	NA	False	AATAAA	-26	NA	87922641	87902807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87903159_87922400
ES.5941.15	chr11	-	1342	1	Intergenic	novelGene_4782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87914901	87913559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87913600_87914900
ES.5941.2	chr11	-	2396	3	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44257	-5	intron_retention	FALSE	canonical	3	52	junction_2	289.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGCTGTTGGGGTTTCT	NA	False	NA	-5	True	ATTAAA	-17	NA	87922616	87870355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87922400
ES.5941.3	chr11	-	2630	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44313	-8	intron_retention	FALSE	canonical	3	7	junction_2	286.479008344804	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGCTGTTGGGGTT	NA	False	NA	-8	True	ATTAAA	-14	NA	87922672	87870358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87892657_87892839_87922400
ES.5941.4	chr11	-	2199	3	NNC	ENSMUSG00000020483.15	novel	2476	3	NA	NA	32	-8	intron_retention	FALSE	canonical	3	31	junction_2	300	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGCTGTTGGGGTT	NA	False	NA	-8	True	ATTAAA	-14	NA	87878327	87870358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87878305
ES.5941.5	chr11	-	2656	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44257	-8	intron_retention	FALSE	canonical	0	0	junction_3	295.357786798016	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGCTGTTGGGGTT	NA	False	NA	-8	True	ATTAAA	-14	NA	87922616	87870358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874837_87891857_87892121_87922400
ES.5941.6	chr11	-	2528	4	NNC	ENSMUSG00000020483.15	novel	2443	3	NA	NA	-44287	-9	intron_retention	FALSE	canonical	0	0	junction_1	24.5130350811337	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTGAGCTGTTGGGGT	NA	False	NA	-9	True	ATTAAA	-13	NA	87922646	87870359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874052_87874159_87874697_87874837_87922400
ES.5941.7	chr11	-	2424	3	NNC	ENSMUSG00000020483.15	novel	2476	3	NA	NA	36	-10	intron_retention	FALSE	non_canonical	0	0	junction_2	315.5	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCTGAGCTGTTGGGG	NA	False	NA	-10	True	ATTAAA	-12	NA	87878323	87870360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87872397_87874697_87874831_87878068
ES.5941.8	chr11	-	850	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	-93	1719	-93	-1089	multi-exon	FALSE	canonical	3	615	junction_2	8	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAAGGCTGCTTTGCGT	NA	False	NA	-5	True	AGTAAA	-35	NA	87878452	87872069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87872397_87874697_87874837_87878068
ES.5941.9	chr11	-	3941	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	-3492	1738	29	-1108	multi-exon	FALSE	canonical	3	631	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878330	87872088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_87872397_87874697
ES.5942.1	chr11	-	169	1	Intergenic	novelGene_4783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGTTGATGGGAGAATC	NA	False	NA	NA	False	NA	NA	NA	87929010	87928841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_87928800_87929000
ES.5943.1	chr11	+	176	2	Antisense	novelGene_ENSMUSG00000086193.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	87929737	87932198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_87929863_87932147
ES.5943.2	chr11	+	176	1	Intergenic	novelGene_4784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87929737	87929913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87929700_87929900
ES.5943.3	chr11	+	171	1	Intergenic	novelGene_4785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	79	False	NA	NA	False	NA	NA	NA	87932027	87932198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87932000_87932200
ES.5944.1	chr11	+	201	1	Intergenic	novelGene_4786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATCCTGAGTTCAAAT	2314	False	NA	NA	False	NA	NA	NA	87934262	87934463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87934300_87934500
ES.5945.1	chr11	+	2470	4	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-64	-6	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6186	False	NA	15	True	AATAAA	-9	NA	87938134	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
ES.5945.10	chr11	+	3444	2	FSM	ENSMUSG00000018379.18	ENSMUST00000171976.2	645	2	-132	-2667	-125	3	multi-exon	FALSE	canonical	3	1310	junction_1	0	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	6470	False	NA	24	True	AATAAA	-18	NA	87938418	87942319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315
ES.5945.11	chr11	+	3554	2	FSM	ENSMUSG00000018379.18	ENSMUST00000171976.2	645	2	-122	-2787	-115	123	multi-exon	FALSE	canonical	3	1310	junction_1	0	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGTCTCTGTTGTGGA	6480	False	NA	12	True	AATAAA	-3	NA	87938428	87942439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315
ES.5945.12	chr11	+	3049	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	235	2078	-110	187	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTTGTGTAGAGGGTA	6485	False	NA	76	True	AATAAA	-25	NA	87938433	87942503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.13	chr11	+	2785	4	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-100	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	662.544086583426	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6495	False	NA	15	True	AATAAA	-9	NA	87938443	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938809_87939326_87939501_87939868_87940042_87940237
ES.5945.15	chr11	+	3162	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-100	-272	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTAGTCTCTATAGTT	6495	False	NA	2	True	TATAAA	-9	NA	87938443	87941605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938400_87941600
ES.5945.16	chr11	+	3040	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-91	-1	-91	1	multi-exon	FALSE	canonical	3	1310	junction_1	135	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGTTGTCCTTTTT	6504	False	NA	22	True	AATAAA	-16	NA	87938452	87942317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868
ES.5945.17	chr11	+	5019	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-86	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTTTATTGAGATTTAA	6509	False	NA	13	True	AATAAA	-15	NA	87938457	87944574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941661_87941737
ES.5945.18	chr11	+	4408	4	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-74	2	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTAAGTTCTCCAT	6521	False	NA	22	True	AATAAA	-24	NA	87938469	87944583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
ES.5945.19	chr11	+	5552	3	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	-52	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	655	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTATTGAGATTTAAGTT	6543	False	NA	16	True	AATAAA	-18	NA	87938491	87944577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87941661_87941737
ES.5945.2	chr11	+	3502	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-409	-145	-64	145	multi-exon	FALSE	canonical	3	1310	junction_1	135	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAGAGCATAATAAACT	6186	False	NA	34	True	AATAAA	-25	NA	87938134	87942461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868
ES.5945.20	chr11	+	4693	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	296	373	-49	-373	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGACTGAGTTCTGTTAT	6546	False	NA	21	True	AATAAA	-38	NA	87938494	87944208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.21	chr11	+	3280	3	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	-47	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	655	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6548	False	NA	15	True	AATAAA	-9	NA	87938496	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87941661_87941737
ES.5945.22	chr11	+	5205	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	-1741	-2705	-47	1	multi-exon	FALSE	canonical	3	275	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATTTAAGTTCTCCA	6548	False	NA	21	True	AATAAA	-23	NA	87938496	87944582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87940922_87941802
ES.5945.23	chr11	+	5265	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-47	-2270	-47	5	multi-exon	FALSE	canonical	3	1310	junction_1	135	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAAGTTCTCCATCCT	6548	False	NA	25	True	AATAAA	-27	NA	87938496	87944586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868
ES.5945.25	chr11	+	5715	2	ISM	ENSMUSG00000018379.18	ENSMUST00000134824.9	896	4	-895	-2282	-46	-1	intron_retention	FALSE	canonical	3	1580	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGAGATTTAAGTTCTC	6549	False	NA	19	True	AATAAA	-21	NA	87938497	87944580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87939501_87939868
ES.5945.26	chr11	+	4740	3	NIC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	-46	-6	intron_retention	FALSE	canonical	3	275	junction_2	517.5	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	6549	False	NA	14	True	AATAAA	-16	NA	87938497	87944575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87940922_87941802
ES.5945.27	chr11	+	6080	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-44	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGAGATTTAAGTTCT	6551	False	NA	18	True	AATAAA	-20	NA	87938499	87944579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938500_87944600
ES.5945.28	chr11	+	2925	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	-1733	-433	-39	-6	multi-exon	FALSE	canonical	3	275	junction_1	0	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6556	False	NA	15	True	AATAAA	-9	NA	87938504	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87940922_87941802
ES.5945.29	chr11	+	3813	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-39	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGTTGTCCTTTTT	6556	False	NA	22	True	AATAAA	-16	NA	87938504	87942317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938500_87942300
ES.5945.3	chr11	+	2443	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	-50	2969	-50	-265	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCTATAGTTATTAAGT	6200	False	NA	9	True	TATAAA	-16	NA	87938148	87941612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.30	chr11	+	3933	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-39	121	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1209	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGACTGTCTCTGTTGTG	6556	False	NA	10	True	AATAAA	-1	NA	87938504	87942437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938500_87942400
ES.5945.31	chr11	+	4491	4	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-39	0	intron_retention	FALSE	canonical	3	62	junction_3	661.204960658947	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGATTTAAGTTCTCC	6556	False	NA	20	True	AATAAA	-22	NA	87938504	87944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940802
ES.5945.32	chr11	+	4279	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-39	467	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTGTTCTGTCGCCAA	6556	False	NA	9	True	AATAAA	-23	NA	87938504	87942783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938500_87942800
ES.5945.34	chr11	+	5068	4	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-37	-4	intron_retention	FALSE	canonical	2	10	junction_2	571.722737774954	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTATTGAGATTTAAGTT	6558	False	NA	16	True	AATAAA	-18	NA	87938506	87944577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939850_87940042_87940237
ES.5945.35	chr11	+	3173	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-35	463	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATAGAGTGTTCTGTCG	6560	False	NA	5	True	AATAAA	-19	NA	87938508	87942779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941661_87941737
ES.5945.36	chr11	+	2562	4	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-32	463	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATAGAGTGTTCTGTCG	6563	False	NA	5	True	AATAAA	-19	NA	87938511	87942779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
ES.5945.37	chr11	+	1503	6	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-16	-6	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	608.322611777665	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6579	False	NA	15	True	AATAAA	-9	NA	87938527	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940425_87940802_87940922_87941802
ES.5945.38	chr11	+	3162	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-16	470	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTGTCGCCAAACT	6579	False	NA	12	True	AATAAA	-26	NA	87938527	87942786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941667_87941742
ES.5945.39	chr11	+	3436	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	-15	-473	-15	473	multi-exon	FALSE	canonical	3	1310	junction_1	135	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTCGCCAAACTGTT	6580	False	NA	15	True	AATAAA	-29	NA	87938528	87942789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868
ES.5945.4	chr11	+	5418	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	-49	-7	-49	7	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTTCTCCATCCTTT	6201	False	NA	27	True	AATAAA	-29	NA	87938149	87944588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.40	chr11	+	5975	2	NNC	ENSMUSG00000018379.18	novel	759	2	NA	NA	-12	2	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTAAGTTCTCCAT	6583	False	NA	22	True	AATAAA	-24	NA	87938531	87944583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87941661_87941737
ES.5945.41	chr11	+	5589	2	FSM	ENSMUSG00000018379.18	ENSMUST00000171976.2	645	2	-18	-4926	-11	-3	multi-exon	FALSE	canonical	3	1310	junction_1	0	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTGAGATTTAAGTTC	6584	False	NA	17	True	AATAAA	-19	NA	87938532	87944578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315
ES.5945.43	chr11	+	4026	6	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	1	-6	intron_retention	FALSE	canonical	0	0	junction_5	610.837261469862	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	6596	False	NA	14	True	AATAAA	-16	NA	87938544	87944575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802_87943866_87943968
ES.5945.44	chr11	+	4291	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	1	-1344	1	-921	multi-exon	FALSE	canonical	3	1310	junction_1	135	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTGACAGTTGATACCA	6596	False	NA	NA	False	TTTAAA	-23	NA	87938544	87943660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868
ES.5945.45	chr11	+	3702	3	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	1	464	intron_retention	FALSE	non_canonical	0	0	junction_2	655	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATAGAGTGTTCTGTCGC	6596	False	NA	6	True	AATAAA	-20	NA	87938544	87942780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87941661_87941737
ES.5945.46	chr11	+	3239	4	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	1	470	intron_retention	FALSE	canonical	2	10	junction_2	571.722737774954	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTGTCGCCAAACT	6596	False	NA	12	True	AATAAA	-26	NA	87938544	87942786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939850_87940042_87940237
ES.5945.47	chr11	+	2427	3	NIC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	2	-6	intron_retention	FALSE	canonical	3	275	junction_2	517.5	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6597	False	NA	15	True	AATAAA	-9	NA	87938545	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87940922_87941802
ES.5945.48	chr11	+	4225	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	713.752057790379	1231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	6597	False	NA	14	True	AATAAA	-16	NA	87938545	87944575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940802_87940922_87941140
ES.5945.49	chr11	+	2831	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	3	-6	intron_retention	FALSE	canonical	0	0	junction_2	609.325600561801	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6598	False	NA	15	True	AATAAA	-9	NA	87938546	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939675_87939764_87939868_87940042_87940237
ES.5945.5	chr11	+	3064	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-39	5	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTTGTCCTTTTTCCTC	6211	False	NA	26	True	AATAAA	-20	NA	87938159	87942321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941661_87941737
ES.5945.50	chr11	+	2861	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	3	188	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGTGTAGAGGGTAA	6598	False	NA	77	True	AATAAA	-26	NA	87938546	87942504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941667_87941742
ES.5945.51	chr11	+	4134	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	3	1	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGATTTAAGTTCTCCA	6598	False	NA	21	True	AATAAA	-23	NA	87938546	87944582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
ES.5945.53	chr11	+	2955	3	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	-2	-6	intron_retention	FALSE	canonical	2	10	junction_2	650	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6600	False	NA	15	True	AATAAA	-9	NA	87938548	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939850
ES.5945.54	chr11	+	1678	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	665.1385194078	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6600	False	NA	15	True	AATAAA	-9	NA	87938548	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940425_87940802_87940922_87941802
ES.5945.55	chr11	+	3560	5	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	649.728164311814	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	6600	False	NA	14	True	AATAAA	-16	NA	87938548	87944575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940802_87940922_87941802
ES.5945.56	chr11	+	1880	7	NNC	ENSMUSG00000018379.18	novel	896	4	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	648.96269795215	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	6600	False	NA	14	True	AATAAA	-16	NA	87938548	87944575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940802_87940922_87941802_87942159_87943735_87943866_87943968
ES.5945.57	chr11	+	2990	4	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	-2	124	intron_retention	FALSE	non_canonical	0	0	junction_3	690.040256474617	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCTCTGTTGTGGAA	6600	False	NA	13	True	AATAAA	-4	NA	87938548	87942440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87941661_87941737
ES.5945.6	chr11	+	3605	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	-39	1796	-39	469	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTTCTGTCGCCAAAC	6211	False	NA	11	True	AATAAA	-25	NA	87938159	87942785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.60	chr11	+	2793	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-2	123	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGTCTCTGTTGTGGA	6600	False	NA	12	True	AATAAA	-3	NA	87938548	87942439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941661_87941737
ES.5945.61	chr11	+	3836	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-2	-7	intron_retention	FALSE	canonical	3	37	junction_4	585.62552027725	1231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTTTATTGAGATTTAA	6600	False	NA	13	True	AATAAA	-15	NA	87938548	87944574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87942090
ES.5945.62	chr11	+	5127	4	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-2	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	690.040256474617	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTATTGAGATTTAAGTT	6600	False	NA	16	True	AATAAA	-18	NA	87938548	87944577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87941661_87941737
ES.5945.63	chr11	+	4091	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	350	921	-2	-921	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTGACAGTTGATACCA	6600	False	NA	NA	False	TTTAAA	-23	NA	87938548	87943660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.64	chr11	+	1570	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	0	-6	intron_retention	FALSE	canonical	3	37	junction_4	585.62552027725	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6602	False	NA	15	True	AATAAA	-9	NA	87938550	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87942090
ES.5945.65	chr11	+	4774	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	45	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	601.003483766941	1231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGAGATTTAAGTTCT	6725	False	NA	18	True	AATAAA	-20	NA	87938673	87944579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940303_87940413
ES.5945.66	chr11	+	816	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	500	4046	70	-701	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGTGTTGAATTGCAT	6750	False	NA	NA	False	NA	NA	NA	87938698	87940535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5945.67	chr11	+	3005	3	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	243	-1204	243	124	intron_retention	FALSE	canonical	3	1111	junction_2	234.5	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCTCTGTTGTGGAA	6923	False	NA	13	True	AATAAA	-4	NA	87938871	87942440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87939501_87939868_87940042_87940237
ES.5945.68	chr11	+	2066	3	NIC	ENSMUSG00000018379.18	novel	896	4	NA	NA	367	-6	intron_retention	FALSE	canonical	3	275	junction_2	652.5	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	7047	False	NA	15	True	AATAAA	-9	NA	87938995	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87939501_87939868_87940922_87941802
ES.5945.69	chr11	+	2548	3	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	551	-1055	-213	-7	intron_retention	FALSE	canonical	3	1111	junction_2	234.5	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAACATTTTTTA	7231	False	NA	-4	True	NA	NA	NA	87939179	87942291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87939501_87939868_87940042_87940237
ES.5945.7	chr11	+	2235	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-25	-6	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6225	False	NA	15	True	AATAAA	-9	NA	87938173	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
ES.5945.70	chr11	+	2477	4	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-200	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	662.544086583426	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	7244	False	NA	15	True	AATAAA	-9	NA	87939192	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87939501_87939868_87940042_87940237_87941661_87941737
ES.5945.71	chr11	+	993	4	FSM	ENSMUSG00000018379.18	ENSMUST00000134824.9	896	4	-85	-12	-85	-6	multi-exon	FALSE	canonical	3	62	junction_2	671.045453005979	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	7359	False	NA	15	True	AATAAA	-9	NA	87939307	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87939501_87939868_87940042_87940802_87940922_87941802
ES.5945.72	chr11	+	2318	3	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	8	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	555.5	1206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	7474	False	NA	15	True	AATAAA	-9	NA	87939422	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87939501_87939874_87940042_87940237
ES.5945.73	chr11	+	2734	2	NNC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-388	461	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCATAGAGTGTTCTGT	7901	False	NA	3	True	AATAAA	-17	NA	87939849	87942777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87940042_87940235
ES.5945.74	chr11	+	2903	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	169	-2313	169	-391	multi-exon	FALSE	canonical	3	275	junction_1	0	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAGGAGAGAAAGTAT	8458	False	NA	3	True	AATAAA	-20	NA	87940406	87944190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87940922_87941802
ES.5945.8	chr11	+	3024	5	NNC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	-9	-6	intron_retention	TRUE	non_canonical	0	0	junction_4	601.003483766941	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	6241	False	NA	15	True	AATAAA	-9	NA	87938189	87942310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87941667_87941742
ES.5945.9	chr11	+	3085	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	17	2260	17	5	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTTGTCCTTTTTCCTC	6267	False	NA	26	True	AATAAA	-20	NA	87938215	87942321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ES.5946.1	chr11	-	4110	4	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	-4826	-35712	intron_retention	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTTTATCAGCTCGG	NA	False	NA	NA	False	NA	NA	NA	87943658	87938528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87938856_87939311_87939498_87939865_87940040_87940235
ES.5946.2	chr11	-	5126	1	Genic_Genomic	ENSMUSG00000086193.2	novel	NA	NA	NA	NA	-4826	-35716	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCGCCTTTATCAGC	NA	False	NA	NA	False	NA	NA	NA	87943658	87938532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_87938500_87943700
ES.5946.3	chr11	-	4521	3	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	-4826	-35788	intron_retention	TRUE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTTCCTACCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	87943658	87938604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87938856_87939311_87941664_87941740
ES.5946.4	chr11	-	3956	5	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	-4826	-35788	intron_retention	TRUE	non_canonical	0	0	junction_1	0.433012701892219	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTTCCTACCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	87943658	87938604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87938856_87939311_87939498_87939865_87940040_87940235_87941664_87941741
ES.5946.5	chr11	-	4598	2	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	-4826	-35788	intron_retention	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTTCCTACCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	87943658	87938604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87938856_87939311
ES.5946.6	chr11	-	4230	3	NNC	ENSMUSG00000086193.2	novel	440	2	NA	NA	-4826	-35788	intron_retention	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTTCCTACCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	87943658	87938604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_87938856_87939311_87939496_87939863
ES.5946.9	chr11	-	934	1	Antisense	novelGene_ENSMUSG00000018379.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87943658	87942724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_87942700_87943700
ES.5947.1	chr11	+	4441	2	Intergenic	novelGene_4787	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAACTCCAGCTCCAGGG	NA	False	NA	NA	False	NA	NA	NA	87952090	87956777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87953738_87953983
ES.5948.1	chr11	+	3943	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-353	993	-353	-993	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTTTGTTACAACAGT	NA	False	NA	21	True	AATAAA	-26	NA	87958751	87974562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.10	chr11	+	3720	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-120	-1001	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87958984	87974554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
ES.5948.11	chr11	+	4107	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-31	507	-31	-507	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAAAGCCACGTTGTG	NA	False	NA	NA	False	NA	NA	NA	87959073	87975048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.12	chr11	+	4630	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGGACTGTTAATGCCG	NA	False	NA	16	True	ATTAAA	-21	NA	87959074	87975554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
ES.5948.13	chr11	+	6672	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACTGTTAATGCCGC	NA	False	NA	17	True	ATTAAA	-22	NA	87959079	87975555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
ES.5948.14	chr11	+	3235	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-20	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4268642985624	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87959084	87974554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87959260_87964249_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.15	chr11	+	2456	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-17	2144	-17	-2144	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGGCTGCAGCTGACT	NA	False	NA	NA	False	NA	NA	NA	87959087	87973411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.16	chr11	+	3564	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	3	-1006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.4268642985624	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGTAGCTATGACT	NA	False	NA	8	True	AATAAA	-13	NA	87959107	87974549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87959260_87963892_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.17	chr11	+	6408	5	ISM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	11	1006	11	-1006	intron_retention	FALSE	canonical	3	105	junction_3	7.92148975887743	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGTAGCTATGACT	NA	False	NA	8	True	AATAAA	-13	NA	87959115	87974549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228
ES.5948.18	chr11	+	3606	3	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	32	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGACTGTTAATGCC	NA	False	NA	15	True	ATTAAA	-20	NA	87959136	87975553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87959260_87969228_87969382_87972223
ES.5948.19	chr11	+	117	1	Intergenic	novelGene_4788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	87960645	87960762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_87960600_87960800
ES.5948.3	chr11	+	5836	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-190	-1001	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87958914	87974554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
ES.5948.4	chr11	+	1802	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-182	-5027	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTCACTTTTTTGTT	NA	False	NA	NA	False	AATGAA	-17	NA	87958922	87970528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
ES.5948.5	chr11	+	2186	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-179	2576	-179	-2576	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAACAGAATCATTTTA	NA	False	NA	NA	False	AATAAA	-31	NA	87958925	87972979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.6	chr11	+	4268	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-166	-499	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACGTTGTGTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	87958938	87975056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
ES.5948.7	chr11	+	4652	5	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-165	-1006	intron_retention	FALSE	canonical	3	100	junction_4	5.53962995154008	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGTAGCTATGACT	NA	False	NA	8	True	AATAAA	-13	NA	87958939	87974549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_87959260_87963882_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.8	chr11	+	4742	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	-159	0	-159	0	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACTGTTAATGCCGC	NA	False	NA	17	True	ATTAAA	-22	NA	87958945	87975555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5948.9	chr11	+	3598	7	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	-159	-1006	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.4224783183004	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGTAGCTATGACT	NA	False	NA	8	True	AATAAA	-13	NA	87958945	87974549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87958998_87959135_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ES.5949.1	chr11	+	3302	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	-125	3	-125	-3	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGCCAGCGGCGTGG	3210	False	NA	20	True	AATAAA	-24	NA	87989846	88084963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.5949.11	chr11	+	2362	9	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	78122	12	-5035	-12	3prime_fragment	FALSE	canonical	3	15	junction_4	3.67423461417477	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTCTGATGTGGCCA	-6	True	NA	11	True	AATAAA	-15	NA	88068093	88084954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.5949.12	chr11	+	1469	5	Fusion	ENSMUSG00000023723.18_ENSMUSG00000018378.14	novel	3180	11	NA	NA	5620	11	multi-exon	FALSE	canonical	0	0	junction_1	126.053560044927	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGGTAGTTTCATCC	NA	False	NA	30	True	AATAAA	-30	NA	88084266	88102344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_88084491_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.14	chr11	+	1254	5	NNC	ENSMUSG00000023723.18	novel	1332	5	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	125.623196504467	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGATTTGGCTCTCTATT	NA	False	NA	13	True	AATAAA	-13	NA	88095208	88102327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88095235_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.15	chr11	+	1332	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	-1	1	-1	-1	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTCTCTATTTGTGG	NA	False	NA	18	True	AATAAA	-18	NA	88095212	88102332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.16	chr11	+	794	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	-1	539	-1	-3	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTACTTTGAAACTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	88095212	88101794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.17	chr11	+	1404	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095236	88102333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.18	chr11	+	1518	5	NIC	ENSMUSG00000023723.18	novel	1404	5	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	126.053560044927	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGGCTCTCTATTTGT	NA	False	NA	16	True	AATAAA	-16	NA	88095252	88102330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88095540_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.19	chr11	+	779	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	16	609	3	-73	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCACCAGCTTTGTGAAC	NA	False	NA	NA	False	NA	NA	NA	88095252	88101724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ES.5949.3	chr11	+	3090	11	NNC	ENSMUSG00000018378.14	novel	3180	11	NA	NA	-52	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	7.9	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGATGTGGCCAGCGGC	3427	False	NA	16	True	AATAAA	-20	NA	87990063	88084959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079677_88080880_88080952_88083422
ES.5949.4	chr11	+	1367	5	ISM	ENSMUSG00000018378.14	ENSMUST00000133149.2	1844	6	8	1671	8	414	5prime_fragment	FALSE	canonical	2	4	junction_1	8.4372685153431	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACAGGGAAAGAAATGCT	3487	False	NA	NA	False	NA	NA	NA	87990123	88074520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064
ES.5949.5	chr11	+	1882	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	158	1140	14	-4	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGAGTTCGGTTTCTT	3493	False	NA	NA	False	NA	NA	NA	87990129	88083826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.5949.6	chr11	+	199	1	Intergenic	novelGene_4789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCATGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	88040539	88040738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88040500_88040700
ES.5949.7	chr11	+	2995	11	NNC	ENSMUSG00000018378.14	novel	805	4	NA	NA	-1158	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.87677249878168	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGCTCTGATGTGGC	766	False	NA	9	True	AATAAA	-13	NA	88051928	88084952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88051956_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.5949.8	chr11	+	3515	12	NNC	ENSMUSG00000018378.14	novel	805	4	NA	NA	-694	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.3705505017579	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGCTCTGATGTGGC	1230	False	NA	9	True	AATAAA	-13	NA	88052392	88084952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88052776_88058856_88059021_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.5949.9	chr11	+	3191	11	NNC	ENSMUSG00000018378.14	novel	805	4	NA	NA	2496	-14	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.60713830755047	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGCTCTGATGTGGC	4420	False	NA	9	True	AATAAA	-13	NA	88055582	88084952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88055806_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ES.595.1	chr1	+	171	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTAATTTAGATCAC	NA	False	NA	NA	False	NA	NA	NA	60536888	60537059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60536900_60537100
ES.5950.1	chr11	+	174	1	Intergenic	novelGene_4790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACATATCCCCAT	4887	False	NA	NA	False	NA	NA	NA	88104184	88104358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88104200_88104400
ES.5951.1	chr11	-	175	2	Antisense	novelGene_ENSMUSG00000023723.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	88108606	88096840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88096878_88108468
ES.5951.2	chr11	-	168	1	Intergenic	novelGene_4791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAACAAACAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	88104566	88104398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88104400_88104600
ES.5951.3	chr11	-	176	1	Intergenic	novelGene_4792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATGTACATAAAA	NA	False	NA	NA	False	NA	NA	NA	88108606	88108430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88108400_88108600
ES.5952.1	chr11	+	1921	3	Intergenic	novelGene_4793	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGGATAGTTTCAGT	6230	False	NA	NA	False	NA	NA	NA	88198989	88223047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88199224_88219860_88220173_88221672
ES.5953.1	chr11	+	4102	1	Antisense	novelGene_ENSMUSG00000069769.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-4	NA	88235921	88240023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88235900_88240000
ES.5954.1	chr11	+	178	1	Intergenic	novelGene_4796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGAGAATAT	NA	False	NA	NA	False	NA	NA	NA	88492370	88492548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88492400_88492500
ES.5955.1	chr11	+	5361	1	Intergenic	novelGene_4797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCAGTATGAACACTG	NA	False	NA	NA	False	AAGAAA	-19	NA	88532089	88537450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88532100_88537400
ES.5956.1	chr11	+	189	1	Intergenic	novelGene_4800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGTGACACAACTGAG	NA	False	NA	NA	False	NA	NA	NA	88590562	88590751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88590600_88590800
ES.5957.1	chr11	-	6178	11	NNC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	57467	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.9462219947249	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTAGTGTTCTTGTGT	1134	False	NA	-1	True	AATAAA	-20	NA	88551460	88230207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88551040_88551157_88551437
ES.5957.10	chr11	-	1990	5	ISM	ENSMUSG00000069769.14	ENSMUST00000092794.12	1855	14	332000	-816	204046	816	3prime_fragment	FALSE	canonical	3	5	junction_3	5.44862367942584	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATATAAACATC	NA	False	NA	NA	False	NA	NA	NA	88276927	88233898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870
ES.5957.11	chr11	-	1824	14	FSM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	35	4577	-12	-70	multi-exon	FALSE	canonical	0	0	junction_9	5.72650848321069	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACGGCCGTGTTTTGAG	2017	False	NA	NA	False	NA	NA	NA	88609020	88234784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
ES.5957.12	chr11	-	1030	9	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	127965	5072	-117	-565	3prime_fragment	FALSE	canonical	2	9	junction_3	4.41411089575239	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTGGTTTGGTTCTG	NA	False	NA	-3	True	AATATA	-32	NA	88481090	88235279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880
ES.5957.13	chr11	-	4986	4	NNC	ENSMUSG00000069769.14	novel	1748	6	NA	NA	-11138	-43724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.71404520791032	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAGGCAAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	88492111	88300064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88304817_88370831_88370881_88480880_88480974_88492019
ES.5957.14	chr11	-	4725	2	NNC	ENSMUSG00000084411.3	novel	347	2	NA	NA	-4547	-169	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACAGTGGCTCCTGCAG	NA	False	NA	NA	False	AAAACA	-6	NA	88328887	88323980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88324060_88324241
ES.5957.15	chr11	-	2458	8	NNC	ENSMUSG00000069769.14	novel	2516	7	NA	NA	-8	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.39867921524866	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTAGGAAAAGTGCCT	2093	False	NA	NA	False	NA	NA	NA	88608944	88368772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88369808_88369890_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
ES.5957.16	chr11	-	176	1	Intergenic	novelGene_4794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACAACTGCAGA	4305	False	NA	NA	False	NA	NA	NA	88390368	88390192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88390200_88390400
ES.5957.17	chr11	-	226	1	Intergenic	novelGene_4795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATAAAGGATGGATTT	NA	False	NA	NA	False	NA	NA	NA	88484458	88484232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88484200_88484500
ES.5957.18	chr11	-	4549	2	Intergenic	novelGene_4798	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGGAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	88570082	88565432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88567751_88567851
ES.5957.19	chr11	-	3756	1	Intergenic	novelGene_4799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAATATAAATAAGATATT	NA	False	NA	NA	False	NA	NA	NA	88593654	88589898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88589900_88593700
ES.5957.2	chr11	-	6429	14	NIC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	6.31987566352115	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTAGTGTTCTTGTGT	1620	False	NA	-1	True	AATAAA	-20	NA	88609417	88230207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88609277
ES.5957.3	chr11	-	6032	10	NNC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	-35491	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	5.3356476460191	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTAGTGTTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	88516464	88230209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88516415
ES.5957.4	chr11	-	5938	1	NIC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	244826	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTAGTGTTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	88236147	88230209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88230200_88236100
ES.5957.5	chr11	-	6213	13	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	502	4	374	-4	3prime_fragment	FALSE	canonical	0	0	junction_9	5.88075958812578	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTGTTTAGTGTTCTT	2484	False	NA	-5	True	AATAAA	-16	NA	88608553	88230211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530
ES.5957.6	chr11	-	6082	10	NNC	ENSMUSG00000069769.14	novel	1855	14	NA	NA	58222	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	6.32455532033676	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGACTTGTTTAGTGT	1889	False	NA	-9	True	AATAAA	-12	NA	88550705	88230215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88550654
ES.5957.7	chr11	-	6050	9	NNC	ENSMUSG00000069769.14	novel	1855	14	NA	NA	38978	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	6.67902500369627	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACAGACTTGTTTAGTGT	NA	False	NA	-9	True	AATAAA	-12	NA	88441995	88230215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88441883
ES.5957.8	chr11	-	5965	10	NNC	ENSMUSG00000069769.14	novel	6436	14	NA	NA	58225	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	5.97112393001973	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGGTCCAGAAATCAA	1892	False	NA	-69	True	AATAAA	-27	NA	88550702	88230275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88550654
ES.5957.9	chr11	-	3308	11	ISM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	1703	2736	1575	1771	3prime_fragment	FALSE	canonical	0	0	junction_9	5.95399025864168	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCTGTCTTGGTACTAG	3685	False	NA	NA	False	TATAAA	-16	NA	88607352	88232943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335
ES.5958.1	chr11	-	177	1	Intergenic	novelGene_4801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTATAATGAA	8774	False	NA	NA	False	NA	NA	NA	88709529	88709352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88709400_88709500
ES.5959.1	chr11	+	1740	1	Antisense	novelGene_ENSMUSG00000018428.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCCACTCTCCACCC	3463	False	NA	NA	False	NA	NA	NA	88731531	88733271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88731500_88733300
ES.596.1	chr1	+	5338	1	Antisense	novelGene_ENSMUSG00000026014.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAAAACCCCCCTCCT	NA	False	NA	NA	False	TTTAAA	-35	NA	60551003	60556341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_60551000_60556300
ES.5960.1	chr11	+	6581	1	Antisense	novelGene_ENSMUSG00000018428.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGGAGAGATGGCTCA	6877	False	NA	NA	False	NA	NA	NA	88734945	88741526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88734900_88741500
ES.5960.2	chr11	+	1865	2	Intergenic	novelGene_4802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGGCCGGGCGAACAC	6878	False	NA	NA	False	NA	NA	NA	88734946	88755342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88736690_88755220
ES.5960.3	chr11	+	4087	1	Genic_Genomic	ENSMUSG00000092399.2	novel	NA	NA	NA	NA	-644	-26349	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGACAGGAA	NA	False	NA	NA	False	NA	NA	NA	88741785	88745872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_88741800_88745900
ES.5961.1	chr11	-	3833	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	-71	-4	-71	4	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCATTTTTTCTTCAGT	NA	False	NA	96	True	TATAAA	-11	NA	88755483	88721613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.10	chr11	-	2771	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	271.831363164739	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755345	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88736002_88736692_88755222
ES.5961.11	chr11	-	3745	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_7	267.48811188537	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755376	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729909_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.12	chr11	-	5269	11	NNC	ENSMUSG00000018428.16	novel	3828	12	NA	NA	36	-2	intron_retention	FALSE	canonical	0	0	junction_9	411.475345555478	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755376	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729909_88730450_88732129_88734415_88734523_88735084_88736692_88755222
ES.5961.13	chr11	-	2826	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	-466	-2	intron_retention	FALSE	canonical	0	0	junction_9	360.707027932642	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88735790	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734489_88734651_88735084
ES.5961.14	chr11	-	2903	5	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	67	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	397.072096728038	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755345	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88735084_88736692_88755222
ES.5961.16	chr11	-	2142	10	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	-855	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	284.717967447884	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88733221	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88733038
ES.5961.17	chr11	-	3784	12	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	333.559887197348	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755347	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88738051_88738145_88755222
ES.5961.18	chr11	-	3701	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	274.179886206118	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755361	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723189_88723963_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.2	chr11	-	3814	12	NNC	ENSMUSG00000018428.16	novel	3828	12	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	348.017597161242	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755345	88721617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734415_88734523_88735068_88736692_88755222
ES.5961.22	chr11	-	2826	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755347	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88735827_88755222
ES.5961.23	chr11	-	3181	12	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	261.421985581654	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755407	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88735414_88735983_88736692_88755222
ES.5961.24	chr11	-	8055	9	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	72	-2	intron_retention	FALSE	canonical	0	0	junction_8	299.643094989689	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755340	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88736686_88755218
ES.5961.25	chr11	-	5430	12	NNC	ENSMUSG00000018428.16	novel	3828	12	NA	NA	-5670	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	347.320391778909	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88747999	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88740862_88741021_88746293
ES.5961.26	chr11	-	3657	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	273.988850138103	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755344	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729850_88730446_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.28	chr11	-	3969	13	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	66	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	388.52615920796	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755346	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88740862_88741021_88746293_88746416_88755222
ES.5961.29	chr11	-	3901	11	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	225	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88754318	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88753982
ES.5961.3	chr11	-	7120	10	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	67	0	intron_retention	FALSE	non_canonical	0	0	junction_8	285.598829405908	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755345	88721617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88733151_88734094_88736692_88755222
ES.5961.30	chr11	-	3683	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	270.947614863095	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755347	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730571_88731994_88732129_88735084_88736692_88755222
ES.5961.31	chr11	-	3556	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	285.598829405908	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755347	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88735084_88736692_88755222
ES.5961.33	chr11	-	3549	9	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	69	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	297.385271995773	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755343	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.34	chr11	-	3671	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	190	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755222	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755116
ES.5961.35	chr11	-	3705	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	66	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	273.306494617307	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755346	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735068_88736692_88755222
ES.5961.37	chr11	-	3755	12	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	347.320391778909	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88755347	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88744242_88744308_88755222
ES.5961.39	chr11	-	6975	10	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	2253	-3	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_7	279.719480291096	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTTGAGTCCATTTTTT	NA	False	NA	89	True	TATAAA	-4	NA	88740076	88721620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729909_88730450_88730578_88731994_88732129_88735084
ES.5961.4	chr11	-	3640	11	ISM	ENSMUSG00000018428.16	ENSMUST00000143720.8	3828	12	5673	0	-1332	0	3prime_fragment	FALSE	canonical	0	0	junction_10	360.113662612237	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88736656	88721617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734415_88734523_88735084
ES.5961.40	chr11	-	3837	2	NIC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	6136	-5	intron_retention	FALSE	canonical	3	816	junction_1	0	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACCTTGAGTCCATTTT	NA	False	NA	87	True	TATAAA	-2	NA	88726230	88721622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88723197_88723967
ES.5961.41	chr11	-	3929	8	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	-166	-5	intron_retention	FALSE	canonical	1	1	junction_5	313.855614795682	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACCTTGAGTCCATTTT	NA	False	NA	87	True	TATAAA	-2	NA	88732532	88721622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726209_88727837_88728016_88729755_88729884_88730450
ES.5961.42	chr11	-	4162	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-6	intron_retention	FALSE	canonical	3	816	junction_1	40.4496333667707	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAACCTTGAGTCCATTT	NA	False	NA	86	True	TATAAA	-1	NA	88755344	88721623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.43	chr11	-	3873	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	184	-9	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_10	259.49221568286	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTAACCTTGAGTCCA	NA	False	NA	83	True	CATAAA	-14	NA	88755228	88721626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88754914
ES.5961.44	chr11	-	3639	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	66	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCTAACCTTGAGTCC	NA	False	NA	82	True	CATAAA	-13	NA	88755346	88721627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736649_88755222
ES.5961.45	chr11	-	3914	12	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-11	intron_retention	FALSE	canonical	1	1	junction_10	347.826070337765	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTAACCTTGAGTC	NA	False	NA	81	True	CATAAA	-12	NA	88755344	88721628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734415_88734651_88735084_88736692_88755222
ES.5961.47	chr11	-	3720	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	-63	101	-63	-101	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTTGACTCTTTTATA	NA	False	NA	-9	True	NA	NA	NA	88755475	88721718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.48	chr11	-	3655	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	36	-102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	272.815615388856	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTTGACTCTTTTAT	NA	False	NA	-10	True	NA	NA	NA	88755376	88721719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725452_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.5	chr11	-	3078	9	ISM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	9082	2	-881	-2	3prime_fragment	FALSE	canonical	3	816	junction_2	54.8917969736827	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88733247	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994
ES.5961.50	chr11	-	3384	10	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	727	-104	intron_retention	FALSE	non_canonical	0	0	junction_9	285.645122140164	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGTTGACTCTTTT	NA	False	NA	-12	True	NA	NA	NA	88734597	88721721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88733153_88734094
ES.5961.51	chr11	-	3879	9	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	72	-107	intron_retention	FALSE	canonical	0	0	junction_4	294.226422164971	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGGTGTTGACTCT	NA	False	NA	-15	True	NA	NA	NA	88755340	88721724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.52	chr11	-	3623	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	53	-107	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_7	267.48811188537	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGGTGTTGACTCT	NA	False	NA	-15	True	NA	NA	NA	88755359	88721724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729909_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.53	chr11	-	7955	9	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-108	intron_retention	FALSE	canonical	3	816	junction_2	54.8469461319407	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCAGTGGTGTTGACTC	NA	False	NA	-16	True	NA	NA	NA	88755344	88721725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88736692_88755222
ES.5961.54	chr11	-	5103	11	NIC	ENSMUSG00000018428.16	novel	3828	12	NA	NA	68	-111	intron_retention	FALSE	canonical	0	0	junction_9	360.058661887199	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTGCAGTGGTGTTGA	NA	False	NA	-19	True	NA	NA	NA	88755344	88721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88734415_88734523_88735084_88736692_88755222
ES.5961.55	chr11	-	3633	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	362.073873677734	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTGCAGTGGTGTTGA	NA	False	NA	-19	True	NA	NA	NA	88755347	88721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725452_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735068_88736692_88755222
ES.5961.56	chr11	-	6537	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	66	-111	intron_retention	FALSE	canonical	3	816	junction_2	52.1003305598385	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTGCAGTGGTGTTGA	NA	False	NA	-19	True	NA	NA	NA	88755346	88721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88736692_88755222
ES.5961.57	chr11	-	4981	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	151	-111	intron_retention	FALSE	canonical	0	0	junction_9	359.124546640855	1034	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTGCAGTGGTGTTGA	NA	False	NA	-19	True	NA	NA	NA	88755261	88721728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88735084_88736692_88752142_88752211_88755222
ES.5961.6	chr11	-	5108	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-2	intron_retention	FALSE	canonical	3	816	junction_2	51.917550970413	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755347	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88735084_88736692_88755222
ES.5961.60	chr11	-	3989	11	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	72	-144	intron_retention	FALSE	canonical	1	3	junction_9	272.421383154847	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755340	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734637_88736692_88755222
ES.5961.61	chr11	-	6005	10	ISM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	3057	144	3057	-144	3prime_fragment	FALSE	canonical	3	816	junction_2	51.9631873493743	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88739272	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084
ES.5961.62	chr11	-	3741	11	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	219	-144	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_10	249.485490560072	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88754324	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88754007
ES.5961.64	chr11	-	4228	9	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	297.385271995773	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755344	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722571_88724583_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.65	chr11	-	3412	9	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	65	-144	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	297.385271995773	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755347	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.66	chr11	-	5313	9	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-144	intron_retention	FALSE	canonical	3	816	junction_2	53.202296707943	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755344	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88735084_88736692_88755222
ES.5961.67	chr11	-	3580	11	NNC	ENSMUSG00000018428.16	novel	3721	11	NA	NA	-26	-144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88754569	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88754413
ES.5961.68	chr11	-	3540	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.895949950722	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755344	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722650_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.69	chr11	-	5011	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	12	-144	intron_retention	FALSE	non_canonical	0	0	junction_9	273.306494617307	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755400	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88734654_88736200_88736692_88755222
ES.5961.70	chr11	-	3514	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	70	-144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	272.127708989732	1033	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755342	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730548_88731994_88732129_88735084_88736692_88755222
ES.5961.71	chr11	-	4963	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	68	-144	intron_retention	FALSE	canonical	3	816	junction_2	51.917550970413	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAAAAG	NA	False	NA	12	True	NA	NA	NA	88755344	88721761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88735084_88736692_88755222
ES.5961.72	chr11	-	3439	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	2	317	2	-317	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACTCTTCCACATTCT	NA	False	NA	NA	False	TTTAAA	-44	NA	88755410	88721934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.73	chr11	-	2811	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	66	881	66	82	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACACTGTTCTCACTG	NA	False	NA	NA	False	NA	NA	NA	88755346	88722498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ES.5961.9	chr11	-	3687	11	NNC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	272.1683302664	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGAGTCCATTTTTTC	NA	False	NA	90	True	TATAAA	-5	NA	88755345	88721619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736686_88755218
ES.5962.1	chr11	-	176	1	Intergenic	novelGene_4803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTTTTAAACCG	NA	False	NA	NA	False	NA	NA	NA	88765030	88764854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88764900_88765000
ES.5963.1	chr11	+	176	1	Intergenic	novelGene_4804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTATCTACTAAAA	NA	False	NA	NA	False	NA	NA	NA	88774968	88775144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88775000_88775100
ES.5964.1	chr11	+	1460	1	Intergenic	novelGene_4806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	88786533	88787993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88786500_88788000
ES.5965.1	chr11	-	3073	2	Intergenic	novelGene_4805	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	88787240	88781073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88783940_88787033
ES.5966.1	chr11	+	1273	4	Antisense	novelGene_ENSMUSG00000000278.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	88815367	88825062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88815549_88819988_88820153_88821031_88821171_88824273
ES.5966.2	chr11	+	2057	4	Antisense	novelGene_ENSMUSG00000000278.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	88815367	88825062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88815549_88819988_88820388_88820483_88821172_88824273
ES.5966.3	chr11	+	1069	1	Antisense	novelGene_ENSMUSG00000000278.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAACAAACTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	88815367	88816436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_88815400_88816400
ES.5966.4	chr11	+	4239	4	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18614	-1794	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAAGCTACTGTAGGTT	NA	False	NA	NA	False	NA	NA	NA	88815367	88825093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_88815549_88819988_88820153_88821031_88823273_88823440
ES.5966.5	chr11	+	5142	4	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	18614	4835	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATTGGTAAACATGG	NA	False	NA	NA	False	NA	NA	NA	88815367	88831722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_88815549_88819988_88820154_88821033_88823343_88829235
ES.5966.7	chr11	+	2978	4	Genic_Genomic	ENSMUSG00000087338.3	novel	811	5	NA	NA	23178	-1824	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88819931	88825063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_88820153_88821031_88823273_88823440_88823921_88825027
ES.5967.1	chr11	+	3575	1	Intergenic	novelGene_4808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCTAGCTCCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	88839440	88843015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88839400_88843000
ES.5967.2	chr11	+	161	1	Intergenic	novelGene_4809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88842658	88842819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88842700_88842800
ES.5968.1	chr11	-	2749	14	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	85	800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	695.143423113695	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATAAGGTGTTGGAG	5286	False	NA	NA	False	NA	NA	NA	88846206	88814045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88814500_88814562_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.10	chr11	-	1906	12	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	40	-2	combination_of_known_splicesites	FALSE	canonical	2	32	junction_11	738.984863240901	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5241	False	NA	-11	True	AATAAA	-18	NA	88846251	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88846119
ES.5968.12	chr11	-	1584	9	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	13769	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_8	867.563506321007	1056	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	8961	False	NA	-11	True	AATAAA	-18	NA	88832522	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88832391
ES.5968.14	chr11	-	2652	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	723.2799519473	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5269	False	NA	-11	True	AATAAA	-18	NA	88846223	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835605_88837593_88838061_88843231_88843381_88846119
ES.5968.15	chr11	-	1990	14	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	695.143423113695	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5257	False	NA	-11	True	AATAAA	-18	NA	88846235	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815180_88815228_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.16	chr11	-	1052	4	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	23699	-2	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	1285.62574474672	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	4701	False	NA	-11	True	AATAAA	-18	NA	88822592	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88822545
ES.5968.17	chr11	-	1435	7	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	19309	-2	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	961.190826816172	1054	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	311	False	NA	-11	True	AATAAA	-18	NA	88826982	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88826889
ES.5968.18	chr11	-	1811	1	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	29633	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1049	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	NA	False	NA	-11	True	AATAAA	-18	NA	88816658	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88814800_88816700
ES.5968.19	chr11	-	2062	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	25	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	722.232010083248	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5226	False	NA	-11	True	AATAAA	-18	NA	88846266	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834630_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.2	chr11	-	2139	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	-42	0	-42	0	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5159	False	NA	-9	True	AATAAA	-20	NA	88846333	88814845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.20	chr11	-	1967	14	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	85	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	695.143423113695	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5286	False	NA	-11	True	AATAAA	-18	NA	88846206	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815282_88815324_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.23	chr11	-	1996	12	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	9	-2	combination_of_known_splicesites	TRUE	canonical	2	12	junction_10	744.815934885596	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5210	False	NA	-11	True	AATAAA	-18	NA	88846282	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88843231_88843381_88846119
ES.5968.25	chr11	-	2978	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	79	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	717.347675468458	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5280	False	NA	-11	True	AATAAA	-18	NA	88846212	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88827350_88827449_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.27	chr11	-	2045	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	-2705	-2	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_12	719.627044609451	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	2496	False	NA	-11	True	AATAAA	-18	NA	88848996	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88848874
ES.5968.29	chr11	-	1949	14	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	695.143423113695	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5232	False	NA	-11	True	AATAAA	-18	NA	88846260	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88814966_88815080_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.3	chr11	-	4198	11	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	64	-2	intron_retention	FALSE	canonical	3	2404	junction_3	154.829616030009	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5265	False	NA	-11	True	AATAAA	-18	NA	88846227	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.31	chr11	-	1866	4	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	23756	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1315.72295293838	1049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	4758	False	NA	-11	True	AATAAA	-18	NA	88822535	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88821674
ES.5968.33	chr11	-	1839	15	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	68	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	903.967897208564	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTGTTGTGATATTT	5269	False	NA	-33	True	NA	NA	NA	88846223	88814869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88814966_88815077_88815244_88815297_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.34	chr11	-	1922	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	68	107	68	-107	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGAAATCCATATT	5269	False	NA	-116	True	NA	NA	NA	88846223	88814952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.35	chr11	-	1514	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	65	518	65	-518	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACCGAAAGACTGTGGCC	5266	False	NA	NA	False	NA	NA	NA	88846226	88815363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.36	chr11	-	198	1	Intergenic	novelGene_4807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1019	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	3466	False	NA	NA	False	NA	NA	NA	88823827	88823629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88823600_88823800
ES.5968.4	chr11	-	2114	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_12	707.716025127467	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5210	False	NA	-11	True	AATAAA	-18	NA	88846282	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846091
ES.5968.5	chr11	-	1829	12	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	57	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	748.200552068563	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5258	False	NA	-11	True	AATAAA	-18	NA	88846234	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88843350_88843381_88846119
ES.5968.6	chr11	-	2036	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	50	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	723.38993634139	1057	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5251	False	NA	-11	True	AATAAA	-18	NA	88846241	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824282_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.7	chr11	-	3053	12	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	58	-2	intron_retention	FALSE	canonical	3	2404	junction_3	150.87162733226	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5259	False	NA	-11	True	AATAAA	-18	NA	88846233	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5968.8	chr11	-	2979	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	71	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	717.347675468458	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACGGCTGAAAATTCTG	5272	False	NA	-11	True	AATAAA	-18	NA	88846220	88814847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88827343_88827449_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ES.5969.1	chr11	-	179	1	Intergenic	novelGene_4810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	88852780	88852601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88852600_88852800
ES.597.1	chr1	+	7120	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTATTATTCAACCTTT	492	False	NA	NA	False	AATAAA	-16	NA	60597151	60604271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60597200_60604300
ES.5970.1	chr11	-	181	1	Intergenic	novelGene_4811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAACAA	9395	False	NA	NA	False	NA	NA	NA	88854432	88854251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88854300_88854400
ES.5971.1	chr11	-	984	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	-168	3	-154	-3	multi-exon	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGCTCTCGCGTCAT	6651	False	NA	-3	True	AATAAA	-23	NA	88857911	88855486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88856100_88857540
ES.5972.1	chr11	+	2631	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-1904	-17835	intron_retention	FALSE	canonical	3	1774	junction_1	0	741	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	7527	False	NA	15	True	AATAAA	-26	NA	88859173	88863945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88861306_88863446
ES.5972.10	chr11	+	4027	9	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-23	0	intron_retention	FALSE	canonical	3	336	junction_4	463.976275659651	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9408	False	NA	15	True	AATAAA	-17	NA	88861054	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88861099_88861243_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.11	chr11	+	924	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-1	-17548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	319	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9430	False	NA	NA	False	NA	NA	NA	88861076	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861339_88863425
ES.5972.12	chr11	+	579	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	0	18497	0	-17838	5prime_fragment	FALSE	canonical	3	638	junction_1	568	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGCTCTCGCGTCAT	9431	False	NA	12	True	AATAAA	-44	NA	88861077	88863942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88861099_88861243_88861306_88863446
ES.5972.13	chr11	+	3990	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	499.167040553561	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9432	False	NA	13	True	AATAAA	-15	NA	88861078	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861088_88861243_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.14	chr11	+	1014	2	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	-17546	intron_retention	FALSE	canonical	3	1774	junction_1	0	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATCTTCCTATTTATT	9433	False	NA	NA	False	NA	NA	NA	88861079	88864234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88861306_88863446
ES.5972.15	chr11	+	2563	7	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	-2	intron_retention	FALSE	canonical	2	142	junction_1	84.8816169078375	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9433	False	NA	13	True	AATAAA	-15	NA	88861079	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88861306_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.16	chr11	+	1010	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	-17548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	433.463570172473	743	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9433	False	NA	NA	False	NA	NA	NA	88861079	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88861723_88861846_88863425
ES.5972.17	chr11	+	4329	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	287.460528691428	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9433	False	NA	15	True	AATAAA	-17	NA	88861079	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861169_88861243_88861306_88861723_88861851_88863316_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.18	chr11	+	4135	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	287.460528691428	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9433	False	NA	13	True	AATAAA	-15	NA	88861079	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88861723_88861846_88863425_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.19	chr11	+	4066	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	3	-6	intron_retention	FALSE	non_canonical	0	0	junction_2	161.620649593423	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATGTCCACTCTGAGT	9434	False	NA	9	True	AATAAA	-11	NA	88861080	88882433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861377_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.2	chr11	+	2254	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-1235	-17548	intron_retention	TRUE	non_canonical	0	0	junction_1	0	744	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	8196	False	NA	NA	False	NA	NA	NA	88859842	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88860416_88860482_88861384_88863452
ES.5972.20	chr11	+	3106	11	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	487.135258424188	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9435	False	NA	13	True	AATAAA	-15	NA	88861081	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88863446_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.21	chr11	+	1032	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	300.756084264678	743	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTCCTATTTATTTA	9435	False	NA	NA	False	NA	NA	NA	88861081	88864236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88861703_88861820_88863399
ES.5972.22	chr11	+	882	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17548	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	758	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9435	False	NA	NA	False	NA	NA	NA	88861081	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861116_88861243_88861306_88863446
ES.5972.23	chr11	+	859	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	319	743	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9435	False	NA	NA	False	NA	NA	NA	88861081	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88863452
ES.5972.24	chr11	+	4084	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	260.768285582108	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTCCACTCTGAGTTA	9435	False	NA	11	True	AATAAA	-13	NA	88861081	88882435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88861723_88861820_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.25	chr11	+	4282	11	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	292.98568224403	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTCCACTCTGAGTTA	9435	False	NA	11	True	AATAAA	-13	NA	88861081	88882435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88861723_88861851_88862193_88862314_88863399_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.26	chr11	+	4141	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	268.739214540972	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9435	False	NA	13	True	AATAAA	-15	NA	88861081	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88861723_88861846_88863425_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.27	chr11	+	3020	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-15385	intron_retention	FALSE	non_canonical	0	0	junction_1	887	929	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTATAAAGCAGGCTA	9435	False	NA	NA	False	NA	NA	NA	88861081	88866395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88863446
ES.5972.28	chr11	+	1067	2	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17544	intron_retention	FALSE	non_canonical	0	0	junction_1	0	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTTCCTATTTATTTA	9435	False	NA	NA	False	NA	NA	NA	88861081	88864236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861338_88863425
ES.5972.29	chr11	+	849	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	4	18223	4	-17564	5prime_fragment	FALSE	canonical	3	638	junction_1	568	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATCTTTTAAAG	9435	False	NA	NA	False	NA	NA	NA	88861081	88864216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88861099_88861243_88861306_88863446
ES.5972.3	chr11	+	4244	8	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-93	2	intron_retention	FALSE	canonical	3	336	junction_3	495.280419436859	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTCTGAGTTATGTTTT	9338	False	NA	17	True	AATAAA	-19	NA	88860984	88882441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.30	chr11	+	736	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	-17840	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	300.756084264678	740	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATACTGCTCTCGCGTC	9435	False	NA	10	True	AATAAA	-42	NA	88861081	88863940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88861703_88861846_88863425
ES.5972.32	chr11	+	3398	12	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	168.250010745029	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9435	False	NA	15	True	AATAAA	-17	NA	88861081	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861116_88861243_88861377_88861723_88861855_88863383_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.33	chr11	+	3969	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	521.171996561596	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9435	False	NA	15	True	AATAAA	-17	NA	88861081	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88863446_88865006_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.34	chr11	+	4186	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_1	287.460528691428	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9435	False	NA	15	True	AATAAA	-17	NA	88861081	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861091_88861243_88861306_88861723_88861855_88863383_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.35	chr11	+	4198	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	4	4	intron_retention	FALSE	non_canonical	0	0	junction_3	268.739214540972	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGAGTTATGTTTTCG	9435	False	NA	19	True	AATAAA	-21	NA	88861081	88882443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861306_88861723_88861855_88863383_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.36	chr11	+	934	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	6	-17548	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129	743	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	9437	False	NA	NA	False	NA	NA	NA	88861083	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861116_88861243_88861339_88863425
ES.5972.37	chr11	+	4290	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	262.18271830496	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9438	False	NA	15	True	AATAAA	-17	NA	88861084	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861116_88861243_88861306_88861723_88861850_88863296_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.38	chr11	+	4210	8	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	8	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	127.576147729063	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9439	False	NA	13	True	AATAAA	-15	NA	88861085	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861377_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.39	chr11	+	4069	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_1	499.167040553561	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9439	False	NA	15	True	AATAAA	-17	NA	88861085	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861172_88861243_88861306_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.4	chr11	+	4243	8	Fusion	ENSMUSG00000033983.15_ENSMUSG00000081766.4	novel	2607	7	NA	NA	-39	1	intron_retention	FALSE	non_canonical	0	0	junction_1	127.576147729063	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACTCTGAGTTATGTTT	9392	False	NA	16	True	AATAAA	-18	NA	88861038	88882440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_88861339_88863425_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.40	chr11	+	4482	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	18	0	intron_retention	FALSE	non_canonical	0	0	junction_1	156.989997690936	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9449	False	NA	15	True	AATAAA	-17	NA	88861095	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861373_88861696_88861851_88863316_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.41	chr11	+	4250	8	Fusion	ENSMUSG00000033983.15_ENSMUSG00000081766.4	novel	2607	7	NA	NA	47	2	intron_retention	FALSE	canonical	0	0	junction_1	127.576147729063	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTCTGAGTTATGTTTT	9478	False	NA	17	True	AATAAA	-19	NA	88861124	88882441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_88861322_88863316_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.42	chr11	+	3262	10	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	78	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	170.589464598781	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTCCACTCTGAGTTA	9509	False	NA	11	True	AATAAA	-13	NA	88861155	88882435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861338_88863425_88863680_88864290_88864384_88864630_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.43	chr11	+	787	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	104	-17838	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	143.5	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGCTCTCGCGTCAT	9535	False	NA	12	True	AATAAA	-44	NA	88861181	88863942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861377_88861723_88861820_88863446
ES.5972.44	chr11	+	3336	11	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	185	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	292.002671220658	991	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9616	False	NA	15	True	AATAAA	-17	NA	88861262	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861306_88861723_88861850_88863316_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.45	chr11	+	3765	2	Fusion	ENSMUSG00000033983.15_ENSMUSG00000081766.4	novel	2607	7	NA	NA	306	2567	intron_retention	TRUE	non_canonical	0	0	junction_1	0	928	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTATAAAGCAGGCTA	9737	False	NA	NA	False	NA	NA	NA	88861383	88866395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_88861421_88862667
ES.5972.46	chr11	+	2159	1	FSM	ENSMUSG00000081766.4	ENSMUST00000122062.2	346	1	-1409	-404	-1409	404	mono-exon	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATCTTCCTATTTA	NA	False	NA	NA	False	NA	NA	NA	88862073	88864232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88862100_88864200
ES.5972.47	chr11	+	3402	8	NIC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-1381	-8	intron_retention	FALSE	canonical	3	4	junction_1	126.194860660579	989	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATGTCCACTCTGA	NA	False	NA	7	True	AATAAA	-9	NA	88863379	88882431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88863680_88864257_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.48	chr11	+	6110	7	NNC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	-246	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.74428690077	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864514	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88866215_88869823_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.49	chr11	+	8240	3	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	-27	0	intron_retention	FALSE	canonical	3	347	junction_1	29.5	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864733	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88865029_88871894_88878894_88881493
ES.5972.5	chr11	+	4354	9	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-38	0	intron_retention	FALSE	non_canonical	0	0	junction_1	119.546800459067	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	9393	False	NA	15	True	AATAAA	-17	NA	88861039	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861377_88861723_88861820_88863446_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.50	chr11	+	3506	5	ISM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	0	4593	0	-3934	5prime_fragment	FALSE	canonical	3	336	junction_2	9.86154146165801	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTTTGTTGTGTTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	88864760	88877846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842
ES.5972.51	chr11	+	2683	8	NNC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.910736522545	369	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864762	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88865029_88869910_88869989_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.52	chr11	+	1492	6	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	144.505501625371	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	-15	True	NA	13	True	AATAAA	-15	NA	88864774	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88865029_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.53	chr11	+	2706	6	NNC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	16	-2	intron_retention	FALSE	canonical	2	19	junction_3	140.213266134129	369	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	-13	True	NA	13	True	AATAAA	-15	NA	88864776	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88865029_88871894_88873202_88873428_88873477_88875846_88875913_88878804_88878894_88881493
ES.5972.55	chr11	+	5604	5	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	16	0	intron_retention	FALSE	canonical	3	347	junction_1	22.5499445675594	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	-13	True	NA	15	True	AATAAA	-17	NA	88864776	88882439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88865029_88871894_88873202_88873428_88873477_88875842_88878894_88881493
ES.5972.56	chr11	+	2513	7	NNC	ENSMUSG00000033983.15	novel	776	2	NA	NA	753	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	136.74428690077	369	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTCCACTCTGAGTTA	724	False	NA	11	True	AATAAA	-13	NA	88865513	88882435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88865692_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.57	chr11	+	4345	5	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	5247	-2	intron_retention	FALSE	canonical	3	351	junction_3	21.6679486800205	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	5218	False	NA	13	True	AATAAA	-15	NA	88870007	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.58	chr11	+	3054	7	NNC	ENSMUSG00000033983.15	novel	776	2	NA	NA	6212	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	136.74428690077	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	6183	False	NA	13	True	AATAAA	-15	NA	88870972	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88871534_88871738_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.59	chr11	+	181	1	Intergenic	novelGene_4814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	6746	False	NA	NA	False	NA	NA	NA	88871535	88871716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88871500_88871700
ES.5972.6	chr11	+	629	3	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-33	-17838	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	758	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGCTCTCGCGTCAT	9398	False	NA	12	True	AATAAA	-44	NA	88861044	88863942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861116_88861243_88861306_88863446
ES.5972.60	chr11	+	1534	6	NNC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	-6336	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.86692043567	334	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	7279	False	NA	13	True	AATAAA	-15	NA	88872068	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88872365_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ES.5972.7	chr11	+	771	4	NNC	ENSMUSG00000033983.15	novel	3120	11	NA	NA	-33	-17846	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	260.898873554913	740	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAAATACTGCTCT	9398	False	NA	4	True	AATAAA	-44	NA	88861044	88863934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88861099_88861243_88861377_88861723_88861820_88863446
ES.5972.8	chr11	+	3063	3	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	-31	16044	-31	-15385	intron_retention	FALSE	canonical	3	638	junction_1	568	929	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTATAAAGCAGGCTA	9400	False	NA	NA	False	NA	NA	NA	88861046	88866395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88861099_88861243_88861306_88863446
ES.5972.9	chr11	+	4320	8	Fusion	ENSMUSG00000033983.15_ENSMUSG00000081766.4	novel	2607	7	NA	NA	-27	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	164.597096212639	991	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCACTCTGAGTTATG	9404	False	NA	13	True	AATAAA	-15	NA	88861050	88882437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_88861339_88863425_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878712_88878894_88881493
ES.5973.1	chr11	-	205	1	Intergenic	novelGene_4812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACAATAACAACACAACA	7386	False	NA	NA	False	NA	NA	NA	88869703	88869498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88869500_88869700
ES.5974.1	chr11	-	208	1	Intergenic	novelGene_4813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAATAAAAAACAGTACGA	7006	False	NA	NA	False	NA	NA	NA	88870083	88869875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88869900_88870100
ES.5975.1	chr11	-	676	3	NNC	ENSMUSG00000085152.2	novel	581	2	NA	NA	10	314	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGGGTGTGTCTGTGTG	9049	False	NA	NA	False	CATAAA	-6	NA	88887360	88883551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88883706_88883914_88884304_88887227
ES.5975.2	chr11	-	696	3	NNC	ENSMUSG00000085152.2	novel	581	2	NA	NA	-635	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8404	False	NA	NA	False	NA	NA	NA	88888005	88883755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88884304_88887227_88887339_88887968
ES.5976.1	chr11	+	182	1	Intergenic	novelGene_4815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTGTGTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	88888195	88888377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88888200_88888400
ES.5977.1	chr11	+	5600	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	-7	-3	-7	3	multi-exon	TRUE	canonical	3	172	junction_5	154.213123630902	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCCTGCCTTTTGCAA	NA	False	NA	27	True	NA	NA	NA	88890194	88911122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.11	chr11	+	1728	1	NIC	ENSMUSG00000000275.17	novel	1433	5	NA	NA	43	-12556	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGAAATTGAGCAGG	NA	False	NA	NA	False	NA	NA	NA	88890244	88891972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88890200_88892000
ES.5977.12	chr11	+	5507	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	180.202012841419	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890244	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910668_88910707
ES.5977.15	chr11	+	5391	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	49	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	210.985040938925	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGACATTGTCCTGCC	NA	False	NA	19	True	NA	NA	NA	88890250	88911114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906544_88906644_88907020_88910662_88910707
ES.5977.16	chr11	+	5485	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	209.118387522475	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890253	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904379_88906358_88906458_88906544_88906644_88907020_88910648_88910690
ES.5977.17	chr11	+	3336	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	57	2197	57	-2197	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCAGTGGCTGTTTTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	88890258	88908922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.18	chr11	+	1186	5	FSM	ENSMUSG00000000275.17	ENSMUST00000100627.9	1433	5	57	190	57	-190	multi-exon	FALSE	canonical	3	453	junction_3	39.7680776502963	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTACAACCTTCGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-3	NA	88890258	88904338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301
ES.5977.19	chr11	+	2572	8	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	59	-2949	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.00091782522	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATCTCTTTGGTGCTGG	NA	False	NA	44	True	NA	NA	NA	88890260	88908170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904379_88906358_88906458_88906544_88906644_88907020
ES.5977.2	chr11	+	5541	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	6	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	180.202012841419	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCCTGCCTTTTGCAA	NA	False	NA	27	True	NA	NA	NA	88890207	88911122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910662_88910707
ES.5977.20	chr11	+	2463	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	59	3068	59	-3068	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTCGAGGACAGCCTG	NA	False	NA	-75	True	NA	NA	NA	88890260	88908051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.21	chr11	+	5112	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	61	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	178.259948880841	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCCTGCCTTTTGCAA	NA	False	NA	27	True	NA	NA	NA	88890262	88911122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890489_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.23	chr11	+	8310	6	NIC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	63	0	intron_retention	FALSE	canonical	0	0	junction_1	145.274361124047	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890264	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88890909_88899944_88900179_88901630_88904365_88905992_88906017_88906358_88906458_88906544
ES.5977.24	chr11	+	5587	11	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	65	28150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	193.353562160101	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAACAAACCAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	88890266	88939269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88911120_88932033_88932055_88939228
ES.5977.26	chr11	+	4506	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	76	1008	76	-1008	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAACCTAGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	88890277	88910111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.28	chr11	+	2244	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	80	-3129	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	185.978787432868	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTAGTGGTGCGTGCA	NA	False	NA	NA	False	NA	NA	NA	88890281	88907990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907157
ES.5977.29	chr11	+	4396	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	80	1114	80	-1114	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTGATCACTCAGAAA	NA	False	NA	NA	False	GATAAA	-21	NA	88890281	88910005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.3	chr11	+	5571	8	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.00091782522	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890210	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904379_88906358_88906458_88906544_88906644_88907020
ES.5977.32	chr11	+	4883	8	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	5351	2	5351	-2	3prime_fragment	FALSE	canonical	3	172	junction_4	153.905749053883	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACATTGTCCTGCCTTT	NA	False	NA	22	True	NA	NA	NA	88895552	88911117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.33	chr11	+	170	1	Intergenic	novelGene_4816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88897565	88897735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_88897600_88897700
ES.5977.34	chr11	+	4787	7	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	9741	2	9741	-2	3prime_fragment	FALSE	canonical	3	172	junction_3	128.869981850787	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACATTGTCCTGCCTTT	NA	False	NA	22	True	NA	NA	NA	88899942	88911117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.35	chr11	+	6239	6	NIC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	9917	-2	intron_retention	FALSE	canonical	3	174	junction_3	131.239628161619	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACATTGTCCTGCCTTT	NA	False	NA	22	True	NA	NA	NA	88900118	88911117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88900179_88901630_88901800_88904301_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.36	chr11	+	1654	1	NIC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	14505	1832	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTCCCGGCCCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	88904706	88906360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88904700_88906400
ES.5977.37	chr11	+	5349	4	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	15054	-5	intron_retention	FALSE	non_canonical	0	0	junction_3	95.3496489534993	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGACATTGTCCTGCC	NA	False	NA	19	True	NA	NA	NA	88905255	88911114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88906458_88906544_88906644_88907020_88910662_88910707
ES.5977.38	chr11	+	4361	3	ISM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	16092	1	16092	-1	3prime_fragment	FALSE	canonical	3	196	junction_2	6	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACATTGTCCTGCCTTTT	362	False	NA	23	True	NA	NA	NA	88906293	88911118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_88906458_88906544_88906644_88907020
ES.5977.4	chr11	+	5524	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	180.202012841419	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACATTGTCCTGCCTTT	NA	False	NA	22	True	NA	NA	NA	88890224	88911117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020_88910648_88910688
ES.5977.40	chr11	+	2091	2	NNC	ENSMUSG00000000275.17	novel	5566	8	NA	NA	18780	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACATTGTCCTGCCTTT	3050	False	NA	22	True	NA	NA	NA	88908981	88911117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88910662_88910706
ES.5977.5	chr11	+	2624	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	27	2939	27	-2939	multi-exon	FALSE	canonical	3	172	junction_5	154.213123630902	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCTGGGGTCTGAATC	NA	False	NA	54	True	NA	NA	NA	88890228	88908180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ES.5977.6	chr11	+	5380	10	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	201.338545431676	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890228	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907157_88910662_88910707
ES.5977.7	chr11	+	5886	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	28	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	187.024563894693	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGCGACATTGTCCTG	NA	False	NA	17	True	NA	NA	NA	88890229	88911112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88910662_88910707
ES.5977.8	chr11	+	5506	9	NNC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	209.118387522475	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890229	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904379_88906358_88906458_88906544_88906644_88907020_88910662_88910707
ES.5977.9	chr11	+	5463	8	NIC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	192.418018588569	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890229	88911119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906544_88906644_88907020
ES.5978.1	chr11	-	4722	3	Antisense	novelGene_ENSMUSG00000000275.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGAACCAAAATGACC	NA	False	NA	NA	False	NA	NA	NA	88904336	88895258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88895649_88899942_88900200_88900261
ES.5978.2	chr11	-	830	4	Antisense	novelGene_ENSMUSG00000000275.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGAACCAAAATGACC	NA	False	NA	NA	False	NA	NA	NA	88904336	88895258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88895649_88899942_88900177_88901628_88901798_88904299
ES.5978.3	chr11	-	3332	3	Antisense	novelGene_ENSMUSG00000000275.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGAACCAAAATGACC	NA	False	NA	NA	False	NA	NA	NA	88904336	88895258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88895649_88899942_88900177_88901628
ES.5978.4	chr11	-	3982	2	Antisense	novelGene_ENSMUSG00000000275.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCATAACTTGTGAGTAG	NA	False	NA	NA	False	NA	NA	NA	88904336	88898904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88900179_88901628
ES.5978.5	chr11	-	5366	2	Antisense	novelGene_ENSMUSG00000000275.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCCCATAACTTGTGA	NA	False	NA	NA	False	NA	NA	NA	88904336	88898908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_88900200_88900261
ES.5979.1	chr11	-	6093	12	NNC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	-25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.9163047805136	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTTGTTTGACAGACA	3807	False	NA	-2	True	AATAAA	-24	NA	88951599	88925999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88927145_88928692_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.11	chr11	-	4566	10	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	47	-385	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	33.0726846375646	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGGAGTGTTAATTT	3879	False	NA	-2	True	AATAAA	-39	NA	88951527	88928792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932321_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.12	chr11	-	4053	5	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	10087	-388	intron_retention	FALSE	canonical	1	1	junction_2	32.5297940356222	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTGTTAA	NA	False	NA	-5	True	AATAAA	-36	NA	88941487	88928795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88935065_88935138_88939714_88939829_88940674
ES.5979.13	chr11	-	6618	9	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	44	-388	intron_retention	FALSE	canonical	2	6	junction_4	29.6202527842016	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTGTTAA	3876	False	NA	-5	True	AATAAA	-36	NA	88951530	88928795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.14	chr11	-	6635	9	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-13	-388	intron_retention	FALSE	canonical	3	11	junction_3	21.8746428542274	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTGGGAGTGTTAA	3819	False	NA	-5	True	AATAAA	-36	NA	88951587	88928795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.15	chr11	-	6286	8	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	162	-390	intron_retention	FALSE	canonical	1	1	junction_2	32.5168716019163	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGAGGTGGGAGTGTT	3994	False	NA	-7	True	AATAAA	-34	NA	88951412	88928797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932321_88932386_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.16	chr11	-	4915	11	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-63	-396	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	22.2836262758107	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCAGAAATGAGGTGGG	3769	False	NA	-13	True	AATAAA	-28	NA	88951637	88928803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.18	chr11	-	7041	8	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-25	-412	intron_retention	FALSE	canonical	3	11	junction_3	23.3631490748546	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCAGCACTTTATAT	3807	False	NA	-29	True	AATAAA	-12	NA	88951599	88928819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88943373_88946183_88946344_88950756
ES.5979.19	chr11	-	4645	10	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	47	-412	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	30.2401907368732	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCAGCACTTTATAT	3879	False	NA	-29	True	AATAAA	-12	NA	88951527	88928819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88943252_88943373_88946183_88946344_88950756
ES.5979.2	chr11	-	5845	1	Genic_Genomic	ENSMUSG00000000276.12	novel	NA	NA	NA	NA	19730	5	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTTGTTTGACAGACA	2391	False	NA	-2	True	AATAAA	-24	NA	88931844	88925999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_88926000_88931800
ES.5979.20	chr11	-	4727	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-4	-412	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	32.0045309292294	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCCAGCACTTTATAT	3828	False	NA	-29	True	AATAAA	-12	NA	88951578	88928819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939674_88939829_88940674_88940727_88941253_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.22	chr11	-	4738	11	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	9	-413	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	23.0783448279984	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAGCCAGCACTTTATA	3841	False	NA	-30	True	AATAAA	-11	NA	88951565	88928820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932321_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.23	chr11	-	4702	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-44	550	-44	-550	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGATTTTTATTTGC	3788	False	NA	1	True	AGTAAA	-16	NA	88951618	88928957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.24	chr11	-	7342	8	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-34	-552	intron_retention	FALSE	canonical	3	65	junction_3	6.19743198956682	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGGGATTTTTATTT	3798	False	NA	-1	True	AGTAAA	-14	NA	88951608	88928959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.25	chr11	-	4498	10	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	9	-553	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.5860327406926	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGGGATTTTTATT	3841	False	NA	-2	True	AGTAAA	-13	NA	88951565	88928960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88943252_88943373_88946183_88946344_88950756
ES.5979.26	chr11	-	4719	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	43	-553	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.3443783382638	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGGGATTTTTATT	3875	False	NA	-2	True	AGTAAA	-13	NA	88951531	88928960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931845_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.27	chr11	-	4688	11	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	4	-556	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	22.2836262758107	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACACTGTGGGATTTTT	3836	False	NA	-5	True	AGTAAA	-10	NA	88951570	88928963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.28	chr11	-	4577	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-43	-561	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.5173631319587	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTGTACACTGTGGGA	3789	False	NA	-10	True	AGTAAA	-5	NA	88951617	88928968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941253_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.29	chr11	-	3600	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-25	1633	-25	5	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTACTCTGCTTCATT	3807	False	NA	NA	False	AATAAA	-26	NA	88951599	88930040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.3	chr11	-	7616	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-5	-2403	-5	0	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGGTTGTTTGAC	3827	False	NA	-7	True	AATAAA	-19	NA	88951579	88926004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.30	chr11	-	5393	9	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	65	junction_3	5.88960949469487	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAAGTAATTTTACTCT	3812	False	NA	NA	False	AATAAA	-18	NA	88951594	88930048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.31	chr11	-	4947	9	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-21	-450	intron_retention	FALSE	canonical	3	65	junction_3	5.88960949469487	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGAACTCTCTCTCTTG	3811	False	NA	NA	False	AGTAAA	-30	NA	88951595	88930495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.32	chr11	-	3530	10	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-12	-466	intron_retention	FALSE	canonical	3	11	junction_3	22.2261107708929	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3820	False	NA	NA	False	AGTAAA	-14	NA	88951586	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.33	chr11	-	3036	10	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-20	-466	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	29.3021720005637	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3812	False	NA	NA	False	AGTAAA	-14	NA	88951594	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.34	chr11	-	5108	7	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	60	-466	intron_retention	FALSE	canonical	0	0	junction_6	28.8039349163733	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3892	False	NA	NA	False	AGTAAA	-14	NA	88951514	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88943373_88950756
ES.5979.35	chr11	-	3129	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-25	2104	-25	-466	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3807	False	NA	NA	False	AGTAAA	-14	NA	88951599	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.36	chr11	-	6195	7	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-25	-466	intron_retention	FALSE	canonical	3	11	junction_3	24.8579296536672	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3807	False	NA	NA	False	AGTAAA	-14	NA	88951599	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88943373_88946183_88946344_88950756
ES.5979.37	chr11	-	4941	9	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	9	-466	intron_retention	FALSE	canonical	2	6	junction_4	23.3796786761495	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGTCACAGTCACAT	3841	False	NA	NA	False	AGTAAA	-14	NA	88951565	88930511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88943373_88946183_88946344_88950756
ES.5979.39	chr11	-	2797	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	187	-473	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	28.5173631319587	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATCTGCTGGTCACA	4019	False	NA	NA	False	AGTAAA	-7	NA	88951387	88930518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939714_88939829_88940674_88940727_88941253_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.40	chr11	-	173	1	Intergenic	novelGene_4817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88936513	88936340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88936300_88936500
ES.5979.41	chr11	-	6154	4	NIC	ENSMUSG00000000276.12	novel	3562	11	NA	NA	-25	-7330	intron_retention	FALSE	canonical	3	69	junction_2	3.77123616632825	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATCTCAGCCATATCC	3807	False	NA	NA	False	NA	NA	NA	88951599	88937375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88939829_88940674_88943373_88946183_88946344_88950756
ES.5979.42	chr11	-	6469	1	NIC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	7695	-7365	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88943879	88937410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88937400_88943900
ES.5979.43	chr11	-	7048	2	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	177	-14101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTAGATTTGATTTTT	4009	False	NA	NA	False	NA	NA	NA	88951397	88944146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88947867_88948069
ES.5979.5	chr11	-	6041	12	NNC	ENSMUSG00000000276.12	novel	8347	12	NA	NA	56	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.1108389073754	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGTATGGTTGTTTG	3888	False	NA	-9	True	AATAAA	-17	NA	88951518	88926006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88927145_88928692_88931738_88932273_88932386_88932987_88933112_88935065_88935138_88939674_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.6	chr11	-	7266	10	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	187	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	23.986107090008	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAGCACTTAAAAAG	4019	False	NA	-21	True	AATAAA	-5	NA	88951387	88926018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88943252_88943373_88946183_88946344_88950756
ES.5979.7	chr11	-	4956	11	NNC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	-26	-385	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.3443783382638	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGGAGTGTTAATTT	3806	False	NA	-2	True	AATAAA	-39	NA	88951600	88928792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_88931845_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.8	chr11	-	5014	10	NIC	ENSMUSG00000000276.12	novel	5208	11	NA	NA	1	-385	intron_retention	FALSE	canonical	3	42	junction_7	11.5566238822398	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGGAGTGTTAATTT	3833	False	NA	-2	True	AATAAA	-39	NA	88951573	88928792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941639_88943252_88943373_88946183_88946344_88950756
ES.5979.9	chr11	-	4857	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	-34	385	-34	-385	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTGGGAGTGTTAATTT	3798	False	NA	-2	True	AATAAA	-39	NA	88951608	88928792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ES.598.1	chr1	-	3117	2	Antisense	novelGene_ENSMUSG00000026782.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAGAGTCCAATCTCA	6517	False	NA	NA	False	NA	NA	NA	60498279	60457665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_60457710_60495206
ES.598.10	chr1	-	2159	15	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	52	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	11.2431384971149	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACCTGGTTTTAAAGC	NA	False	NA	-11	True	NA	NA	NA	60605872	60522349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60558138_60558220_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.11	chr1	-	5814	1	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	77530	1144	7032	-200	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTCAAGTGTTTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	60528408	60522594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60522600_60528400
ES.598.12	chr1	-	1543	1	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	81516	1429	11018	-485	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTGCCTTGCTCCCTG	NA	False	NA	NA	False	CATAAA	-15	NA	60524422	60522879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60522900_60524400
ES.598.13	chr1	-	8155	14	FSM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	-51	1920	-51	-976	multi-exon	FALSE	canonical	3	5	junction_1	7.94731170356426	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACCAAAACCTGACGT	NA	False	NA	NA	False	ATTAAA	-12	NA	60605989	60523370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60529481_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.14	chr1	-	2998	1	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	78899	2591	8401	-1647	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGTTACTTTACATTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	60527039	60524041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60524000_60527000
ES.598.15	chr1	-	4234	1	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	77458	2796	6960	-1852	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAATTTCGCGTATCTTC	NA	False	NA	NA	False	NA	NA	NA	60528480	60524246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60524200_60528500
ES.598.16	chr1	-	4716	13	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	-50	8574	-50	-190	5prime_fragment	FALSE	canonical	3	25	junction_2	4.25163367294137	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGTGTGTGTCAAGT	NA	False	NA	NA	False	NA	NA	NA	60605988	60530024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.17	chr1	-	2044	11	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	68	13551	54	-2520	5prime_fragment	FALSE	canonical	3	25	junction_3	3.37786915081091	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGGCTATTTTTCAA	NA	False	NA	NA	False	AATAAA	-12	NA	60605870	60535001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.18	chr1	-	1453	6	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	31	20237	17	-926	5prime_fragment	FALSE	canonical	3	28	junction_4	2.93938769133981	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTTTACATTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	60605907	60541687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.19	chr1	-	2483	1	FSM	ENSMUSG00000026014.16	ENSMUST00000127573.3	8483	1	5959	41	5959	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	60555491	60553008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60553000_60555500
ES.598.2	chr1	-	158	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAGATAAATA	NA	False	NA	NA	False	NA	NA	NA	60471156	60470998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60471000_60471200
ES.598.3	chr1	-	2130	14	NNC	ENSMUSG00000026014.16	novel	690	4	NA	NA	33	31337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.11595259509265	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATTTTTCAATTGT	NA	False	NA	NA	False	NA	NA	NA	60605891	60490113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60490297_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.4	chr1	-	173	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	4	True	NA	NA	False	NA	NA	NA	60498514	60498341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60498300_60498500
ES.598.5	chr1	-	1316	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2785	False	NA	NA	False	NA	NA	NA	60502011	60500695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60500700_60502000
ES.598.6	chr1	-	4381	1	Genic_Genomic	ENSMUSG00000026014.16	novel	NA	NA	NA	NA	13035	3426	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCAAAAGTTTCCATGT	NA	False	NA	NA	False	AATAAA	-16	NA	60522405	60518024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_60518000_60522400
ES.598.7	chr1	-	9153	14	FSM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	-24	895	-24	-2	multi-exon	FALSE	canonical	3	5	junction_1	7.94731170356426	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGTTTTAAAGCTTGT	NA	False	NA	-7	True	TTTAAA	-2	NA	60605962	60522345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_60529481_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.8	chr1	-	4088	15	NNC	ENSMUSG00000026014.16	novel	10024	14	NA	NA	167	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1078369272035	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGGTTTTAAAGCTTG	NA	False	NA	-8	True	TTTAAA	-1	NA	60605757	60522346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_60522500_60527358_60529481_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.598.9	chr1	-	2078	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	52	-6	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACCTGGTTTTAAAGC	NA	False	NA	-11	True	NA	NA	NA	60605872	60522349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
ES.5980.1	chr11	-	189	1	Intergenic	novelGene_4818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATTATATAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	88968017	88967828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88967800_88968000
ES.5981.1	chr11	-	181	1	Intergenic	novelGene_4819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAGAATGGGGC	3785	False	NA	NA	False	NA	NA	NA	88992731	88992550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_88992600_88992700
ES.5982.1	chr11	-	205	1	Intergenic	novelGene_4820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCAGGGCATTGTAGAC	9507	False	NA	NA	False	NA	NA	NA	89085769	89085564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_89085600_89085800
ES.5983.1	chr11	-	183	1	Intergenic	novelGene_4821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTGAATTGAGG	NA	False	NA	NA	False	NA	NA	NA	89390142	89389959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_89390000_89390100
ES.5984.1	chr11	-	176	1	Intergenic	novelGene_4822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	89644223	89644047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_89644000_89644200
ES.5985.1	chr11	-	1945	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	26	752	26	-752	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCCTCTTACCTT	NA	False	NA	-1	True	AATAAA	-25	NA	89893694	89874242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
ES.5985.2	chr11	-	1870	5	NIC	ENSMUSG00000020553.9	novel	2723	6	NA	NA	27	-758	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.1435250158287	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTGTCTCCCTCT	NA	False	NA	-7	True	AATAAA	-19	NA	89893693	89874248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_89875583_89878021_89878194_89879520_89879601_89881896_89882015_89893527
ES.5986.1	chr11	+	2836	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-157	-2	-137	2	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGAGAGTAATGCTGG	NA	False	NA	31	True	AATAAA	-36	NA	90140144	90169417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ES.5986.2	chr11	+	2155	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-55	577	-35	-577	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTTGTTGATGGGTTT	NA	False	NA	14	True	AATAAA	-26	NA	90140246	90168838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ES.5986.3	chr11	+	1661	6	FSM	ENSMUSG00000003948.18	ENSMUST00000107887.8	1654	6	-7	0	-7	0	multi-exon	FALSE	canonical	3	73	junction_5	10.2058806577385	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTTTAACTCATTTC	NA	False	NA	NA	False	ATTAAA	-13	NA	90140274	90159291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337
ES.5986.4	chr11	+	1135	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	-26	1568	-6	-1568	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCTGTGTCTCGGAG	NA	False	NA	NA	False	AATATA	-15	NA	90140275	90167847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ES.5986.5	chr11	+	764	2	ISM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	61772	1	61772	-1	3prime_fragment	FALSE	canonical	3	25	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGCAATCTTTTTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	90140281	90142080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_90140562_90141596
ES.5987.1	chr11	-	5666	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	0	-24	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTATTTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-17	NA	90281745	90227361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ES.5987.2	chr11	-	3820	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-13	1835	-13	619	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAATTACTGATTAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	90281734	90229196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ES.5987.3	chr11	-	3028	4	NNC	ENSMUSG00000003949.17	novel	2712	5	NA	NA	36	424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTTTTCCGGTCTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	90280480	90229391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90231804_90236583_90236805_90278611_90278948_90280421
ES.5987.4	chr11	-	3636	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	2030	-24	424	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGTTTTCCGGTCTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	90281745	90229391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ES.5987.6	chr11	-	3215	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	2451	-24	3	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGAGGCTTGCTGTGAC	NA	False	NA	NA	False	ATTAAA	-12	NA	90281745	90229812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ES.5987.7	chr11	-	1567	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	-24	4099	-24	192	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTGTGCATCTATG	NA	False	NA	NA	False	NA	NA	NA	90281745	90231460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ES.5987.8	chr11	-	173	1	Intergenic	novelGene_4823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGAAGTACTCTAATG	NA	False	NA	NA	False	NA	NA	NA	90240796	90240623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_90240600_90240800
ES.5988.1	chr11	+	2924	1	Intergenic	novelGene_4825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTCTCCCAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	90441242	90444166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_90441200_90444200
ES.5989.1	chr11	-	2966	18	NNC	ENSMUSG00000020546.15	novel	1782	16	NA	NA	0	13110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.55578382581351	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGCTGGCTCTGAGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	90528899	90354207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90355423_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.5989.10	chr11	-	1889	16	FSM	ENSMUSG00000020546.15	ENSMUST00000020858.14	1782	16	-21	-86	1	86	multi-exon	FALSE	canonical	2	8	junction_13	1.92527054375915	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATATTTGCTTTATT	NA	False	NA	NA	False	ATTAAA	-23	NA	90528909	90426119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.5989.11	chr11	-	1097	1	Intergenic	novelGene_4826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAACAAATTCTGTTAA	NA	False	NA	NA	False	AATAAA	-7	NA	90489214	90488117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_90488100_90489200
ES.5989.2	chr11	-	6005	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	-20	0	-20	0	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTAGATTTTCTTT	NA	False	NA	NA	False	AGTAAA	-32	NA	90528930	90367317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.5989.3	chr11	-	5236	1	NIC	ENSMUSG00000020546.15	novel	5985	18	NA	NA	67183	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTAGATTTTCTTT	NA	False	NA	NA	False	AGTAAA	-32	NA	90372553	90367317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_90367300_90372600
ES.5989.4	chr11	-	5902	17	NIC	ENSMUSG00000020546.15	novel	5985	18	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	2.94148665643752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGTGCTAGATTTTC	NA	False	NA	NA	False	AGTAAA	-29	NA	90528888	90367320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_90371541_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.5989.5	chr11	-	4866	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	2	1117	2	-1117	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCCGCACTCAAACATG	NA	False	NA	NA	False	ATTAAA	-15	NA	90528908	90368434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.5989.6	chr11	-	127	1	ISM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	158021	3445	68847	-3445	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90370889	90370762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_90370800_90370900
ES.5989.7	chr11	-	3828	13	ISM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	30675	15619	23508	-2	internal_fragment	FALSE	canonical	2	9	junction_3	2.17785572422866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90498235	90382936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170
ES.5989.8	chr11	-	4598	1	Intergenic	novelGene_4824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90406970	90402372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_90402400_90407000
ES.5989.9	chr11	-	3515	18	NNC	ENSMUSG00000020546.15	novel	1782	16	NA	NA	-4	3821	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.09405003324831	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAACATAACAATTGAT	NA	False	NA	NA	False	AATAAA	-11	NA	90528906	90422384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90422629_90422676_90424248_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ES.599.1	chr1	+	1804	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-16	-570	-16	570	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAAGTGCTTAGATG	NA	False	NA	121	True	AATAAA	-42	NA	60743074	60744878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60743100_60744900
ES.599.2	chr1	+	1434	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	-15	-201	-15	201	mono-exon	FALSE	NA	NA	NA	NA	NA	684	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGACACCCTTTT	NA	False	NA	33	True	AATAAA	-34	NA	60743075	60744509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60743100_60744500
ES.5990.1	chr11	+	1000	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	-30	254	-30	16	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTTGCACCTTCATT	NA	False	NA	NA	False	TTTAAA	-32	NA	90528968	90535503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5990.10	chr11	+	4431	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	12	-3219	12	3219	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTTAAGGGCCTAAATAA	NA	False	NA	NA	False	AATAAA	-21	NA	90529010	90538976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5990.11	chr11	+	4262	5	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	14	3814	intron_retention	FALSE	canonical	1	1	junction_4	149.821560531187	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGATGTGCTTACTGT	NA	False	NA	NA	False	NA	NA	NA	90529012	90539571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195_90538755_90539516
ES.5990.12	chr11	+	4998	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	15	-3789	15	3789	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACACATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90529013	90539546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5990.13	chr11	+	2641	5	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	17	3214	intron_retention	FALSE	canonical	1	3	junction_4	148.980703448467	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTCTTAAGGGCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	90529015	90538971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195_90535295_90537074
ES.5990.14	chr11	+	2252	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	30	1046	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	152.067967260257	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTGTTTACAATATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90529028	90536803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531190_90531359_90534478_90534605_90535195
ES.5990.15	chr11	+	2068	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	33	865	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	152.067967260257	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTACATAGGACTAAC	NA	False	NA	NA	False	AATAAA	-14	NA	90529031	90536622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531190_90531359_90534478_90534605_90535195
ES.5990.16	chr11	+	4416	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	34	3214	intron_retention	FALSE	canonical	3	25	junction_1	152.067967260257	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTCTTAAGGGCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	90529032	90538971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531190_90531359_90534478_90534605_90535195
ES.5990.17	chr11	+	4597	2	Antisense	novelGene_ENSMUSG00000020541.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCTCTGAGAAATCTGC	NA	False	NA	NA	False	NA	NA	NA	90536680	90545896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_90538755_90543373
ES.5990.2	chr11	+	1263	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	-30	-9	-30	9	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTTGATTTCTATTC	NA	False	NA	19	True	NA	NA	NA	90528968	90535766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5990.3	chr11	+	2797	3	FSM	ENSMUSG00000020544.15	ENSMUST00000099960.3	773	3	-2027	3	-22	-3	multi-exon	FALSE	canonical	3	285	junction_2	50.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTTTACCTTTCTTT	NA	False	NA	NA	False	TTTAAA	-13	NA	90528976	90535484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90531359_90534478_90534605_90535195
ES.5990.4	chr11	+	2097	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	-1	-872	-1	872	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGGACTAACTACATCT	NA	False	NA	NA	False	AATAAA	-21	NA	90528997	90536629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5990.5	chr11	+	1471	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.442820446649	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCACATAGGCCTGACAAC	NA	False	NA	6	True	NA	NA	NA	90528998	90535753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529630_90531202_90531359_90534478_90534605_90535195
ES.5990.6	chr11	+	4577	1	NIC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	9	-1903	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATTTTGGGGGTAGGAG	NA	False	NA	NA	False	NA	NA	NA	90529007	90533584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_90529000_90533600
ES.5990.7	chr11	+	5039	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	11	3814	intron_retention	FALSE	canonical	3	25	junction_1	152.067967260257	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGATGTGCTTACTGT	NA	False	NA	NA	False	NA	NA	NA	90529009	90539571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531190_90531359_90534478_90534605_90535195
ES.5990.8	chr11	+	951	4	NNC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	11	-4	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	152.067967260257	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTTACCTTTCTT	NA	False	NA	NA	False	TTTAAA	-12	NA	90529009	90535483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_90529379_90531190_90531359_90534478_90534605_90535195
ES.5990.9	chr11	+	2262	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	11	-1049	11	1049	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTTACAATATTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	90529009	90536806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ES.5991.1	chr11	+	2264	2	Antisense	novelGene_ENSMUSG00000020541.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCAGGGGCCAAAGTGC	123	False	NA	NA	False	NA	NA	NA	90548978	90554789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_90549037_90552583
ES.5991.2	chr11	+	2105	2	Antisense	novelGene_ENSMUSG00000020541.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	125	False	NA	NA	False	NA	NA	NA	90548980	90554632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_90549037_90552583
ES.5992.1	chr11	-	4287	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	29	-8	1	8	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGGTTGTCTGACATT	NA	False	NA	NA	False	AATAAA	-21	NA	90578404	90534282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ES.5992.10	chr11	-	4295	4	NIC	ENSMUSG00000020541.13	novel	2439	9	NA	NA	5645	-8	intron_retention	FALSE	canonical	3	243	junction_1	4.24264068711928	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTCAGTTGTGTTGTT	5842	False	NA	-10	True	ATTAAA	-9	NA	90548180	90536524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_90537136_90537660_90537726_90540173_90542789_90547176
ES.5992.11	chr11	-	2864	1	Intergenic	novelGene_4827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7797	False	NA	NA	False	NA	NA	NA	90546225	90543361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_90543400_90546200
ES.5992.12	chr11	-	2390	1	NIC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	3506	-32	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAATAAAAT	3703	False	NA	NA	False	NA	NA	NA	90550319	90547929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_90547900_90550300
ES.5992.2	chr11	-	4104	15	NIC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	215	junction_8	19.7707524657314	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTTGTTTTGTCT	NA	False	NA	-1	True	ATTAAA	-18	NA	90578432	90536515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ES.5992.3	chr11	-	2088	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	-6	2226	-6	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTGTTGTTTTGTC	NA	False	NA	-2	True	ATTAAA	-17	NA	90578439	90536516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ES.5992.4	chr11	-	1839	14	FSM	ENSMUSG00000020541.13	ENSMUST00000107869.9	1826	14	-13	0	-4	0	multi-exon	FALSE	canonical	2	3	junction_10	65.6742003507921	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTGTTGTTTTGTC	NA	False	NA	-2	True	ATTAAA	-17	NA	90578418	90536516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ES.5992.6	chr11	-	2077	16	NNC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.837780523936	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTGTTGTTTTGTC	NA	False	NA	-2	True	ATTAAA	-17	NA	90578463	90536516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90537136_90537660_90537726_90540208_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ES.5992.7	chr11	-	2089	16	FSM	ENSMUSG00000020541.13	ENSMUST00000107868.8	2093	16	2	2	2	-2	multi-exon	FALSE	canonical	2	5	junction_14	62.6969430408426	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTGTTGTTGTTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	90578425	90536518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574157_90575887_90575973_90578338
ES.5992.8	chr11	-	1742	13	NNC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	-11420	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.070163601949	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTGTTGTTGTTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	90565558	90536518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548531_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495
ES.5992.9	chr11	-	2128	16	NNC	ENSMUSG00000020541.13	novel	4308	16	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.1555399171143	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTGTTGTTGTTTTG	NA	False	NA	-4	True	ATTAAA	-15	NA	90578452	90536518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90576002_90578338
ES.5993.1	chr11	+	176	1	Intergenic	novelGene_4828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGAGGTGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	90579749	90579925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_90579700_90579900
ES.5994.1	chr11	-	5074	1	Intergenic	novelGene_4829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	90856147	90851073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_90851100_90856100
ES.5995.1	chr11	-	175	1	Intergenic	novelGene_4830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGAGAGAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	91437887	91437712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_91437700_91437900
ES.5996.1	chr11	+	158	1	Intergenic	novelGene_4831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91692916	91693074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_91692900_91693100
ES.5997.1	chr11	+	5901	18	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-703	-291	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	54.6811455774374	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTTCTGTGTGCGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	93775974	93837520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834600
ES.5997.10	chr11	+	5124	18	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-22	-304	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	48.5562492637205	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTAAGGTTTTTACATTGT	NA	False	NA	NA	False	AGTAAA	-3	NA	93776655	93837507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.11	chr11	+	5430	16	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-19	-6	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.0441334180829	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93776658	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.12	chr11	+	5496	17	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.0265240851909	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTATCAATTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	93776659	93837807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776948_93795988_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814166_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.13	chr11	+	4716	18	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	49.2614660918906	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTATTTTATCAATT	NA	False	NA	10	True	AATAAA	-11	NA	93776659	93837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776948_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600_93834850_93835498
ES.5997.14	chr11	+	5361	18	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	48.2931503807985	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776663	93837811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.15	chr11	+	2442	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-4	-1139	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	38.6884995832095	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAAAGTTTAGGTAGC	NA	False	NA	NA	False	NA	NA	NA	93776673	93835008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93795988_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.16	chr11	+	5299	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	44.6336196157112	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTATTTTATCAATT	NA	False	NA	10	True	AATAAA	-11	NA	93776679	93837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776948_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.17	chr11	+	5290	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	41.7655285492713	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTATCAATTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	93776680	93837807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.18	chr11	+	4132	14	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	5	1935	intron_retention	FALSE	canonical	3	14	junction_1	38.2049905349438	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGGACACAGTCCGGG	NA	False	NA	NA	False	NA	NA	NA	93776682	93825542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93795984_93796185_93799629_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.19	chr11	+	3221	19	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-2	-755	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_18	58.0830875705518	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTTAAACTGGAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	93776689	93835392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834487
ES.5997.2	chr11	+	5859	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	-609	-5	-609	5	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776068	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.20	chr11	+	5284	16	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	37.4358117315492	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93776689	93837803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.21	chr11	+	3750	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	0	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.1927078140367	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTAATGGAAAACCCC	NA	False	NA	NA	False	NA	NA	NA	93776691	93836158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814166_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.23	chr11	+	2168	15	ISM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	23	12870	9	1334	5prime_fragment	FALSE	canonical	3	14	junction_1	37.3045929218002	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGAAACAGTTTTAATT	NA	False	NA	NA	False	CATAAA	-18	NA	93776700	93824941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.24	chr11	+	5266	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	44.0468500576375	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93776700	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.25	chr11	+	4852	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	38	355	24	-355	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATCTGTCCCTGGGCA	NA	False	NA	NA	False	AATAAA	-34	NA	93776715	93837456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.26	chr11	+	3191	15	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	30	-2107	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	46.1572290753937	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAAGCCATGGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	93776721	93825920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776948_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.27	chr11	+	5334	18	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	111	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	53.2524834126952	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93776802	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.28	chr11	+	4896	17	NIC	ENSMUSG00000059474.14	novel	1930	12	NA	NA	-38	-242	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	43.7219552970816	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATTTTCTGGTAA	NA	False	NA	NA	False	TATAAA	-19	NA	93776893	93837569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.29	chr11	+	5108	17	NIC	ENSMUSG00000059474.14	novel	1930	12	NA	NA	-14	-8	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	42.1084908302352	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93776917	93837803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.3	chr11	+	6001	18	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-589	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	63.5290304999453	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGATTTTGTTTACTAGG	NA	False	NA	36	True	AATAAA	-37	NA	93776088	93837828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93777847_93777900_93795984_93796170_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812307_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.30	chr11	+	5222	17	NIC	ENSMUSG00000059474.14	novel	1930	12	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	48.8370616821897	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATCAATTTTTCAA	NA	False	NA	16	True	AATAAA	-17	NA	93776921	93837808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776948_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.31	chr11	+	5510	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	7	7	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	40.9622062851844	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTCAACATTGATTTT	NA	False	NA	26	True	AATAAA	-27	NA	93776938	93837818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.32	chr11	+	6150	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	10	-9	intron_retention	FALSE	canonical	3	5	junction_7	53.8707282605479	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTATTTTATCAATT	NA	False	NA	10	True	AATAAA	-11	NA	93776941	93837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.33	chr11	+	6046	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	10	-2	intron_retention	FALSE	canonical	3	20	junction_1	47.0746996140177	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATCAATTTTTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	93776941	93837809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.34	chr11	+	5502	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	46.5731531437372	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93776944	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.35	chr11	+	6077	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	32	-2	intron_retention	FALSE	canonical	0	0	junction_8	47.785817718231	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATCAATTTTTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	93776963	93837809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814166_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.36	chr11	+	4071	5	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	36	199	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	44.9722136435377	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCAGGATTGAACTAGT	NA	False	NA	NA	False	NA	NA	NA	93776967	93838010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93834600
ES.5997.37	chr11	+	5356	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	46	5	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776977	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.38	chr11	+	4972	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-47	-371	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-18	NA	93776985	93837440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.39	chr11	+	5426	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-47	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	55.1111490927676	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTTATTTTATCAAT	NA	False	NA	9	True	AATAAA	-10	NA	93776985	93837801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799740_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.4	chr11	+	5927	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-567	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	53.5784367902694	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93776110	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815247_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.40	chr11	+	5456	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	57.1181615162813	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776985	93837811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93782164_93782215_93795988_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.41	chr11	+	5397	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-47	4	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	41.2407061984984	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATTTTTCAACATTGAT	NA	False	NA	23	True	AATAAA	-24	NA	93776985	93837815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.42	chr11	+	5369	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-46	-8	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	49.2268950598332	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93776986	93837803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796170_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.43	chr11	+	5406	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-46	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.0231927542214	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776986	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814166_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.44	chr11	+	5299	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-46	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.4168354904492	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93776986	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812307_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.45	chr11	+	5503	19	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-44	-10	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_8	55.7947351381455	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTTATTTTATCAAT	NA	False	NA	9	True	AATAAA	-10	NA	93776988	93837801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.47	chr11	+	7211	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-43	1977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	52.3027936368816	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTTCACCCAATATTTA	NA	False	NA	NA	False	NA	NA	NA	93776989	93830004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93826785_93826875
ES.5997.48	chr11	+	5894	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-43	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.9783115266339	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATCAATTTTTCAAC	NA	False	NA	17	True	AATAAA	-18	NA	93776989	93837809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777687_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.49	chr11	+	5507	18	FSM	ENSMUSG00000059474.14	ENSMUST00000063718.11	3785	18	-49	-1673	-39	9	multi-exon	FALSE	canonical	3	17	junction_17	47.4662509863478	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAACATTGATTTTGT	NA	False	NA	28	True	AATAAA	-29	NA	93776993	93837820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.5	chr11	+	5448	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-39	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	48.5569494897486	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93776638	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.50	chr11	+	2440	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-38	-1230	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAGCTTTTGAAAGA	NA	False	NA	NA	False	TATAAA	-21	NA	93776994	93834917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.52	chr11	+	5321	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	-242	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	53.2999607237077	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATTTTCTGGTAA	NA	False	NA	NA	False	TATAAA	-19	NA	93776995	93837569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.54	chr11	+	5408	17	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-37	4	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	55.7124312878194	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATTTTTCAACATTGAT	NA	False	NA	23	True	AATAAA	-24	NA	93776995	93837815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.55	chr11	+	3587	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	-743	intron_retention	FALSE	canonical	3	20	junction_1	47.0746996140177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATGGTTGACAAAGTA	NA	False	NA	NA	False	ATTAAA	-25	NA	93776995	93835404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.56	chr11	+	4925	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-37	-352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.1098737177995	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGTCCCTGGGCAAAC	NA	False	NA	NA	False	AATAAA	-37	NA	93776995	93837459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795988_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.57	chr11	+	5394	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	5	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	46.4135912560879	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776995	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.58	chr11	+	3265	16	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-37	-2106	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	40.7327332198019	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAGCCATGGGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	93776995	93825921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.59	chr11	+	5337	17	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	39.4792271327593	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776997	93837811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.6	chr11	+	5544	17	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-38	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	57.3672039910435	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATTTTTCAACATTGAT	NA	False	NA	23	True	AATAAA	-24	NA	93776639	93837815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776948_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834600
ES.5997.60	chr11	+	3048	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-35	-619	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGCCATTTCTTCCA	NA	False	NA	NA	False	CATAAA	-17	NA	93776997	93835528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.61	chr11	+	3734	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-35	11	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	46.4135912560879	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTAATGGAAAACCCC	NA	False	NA	NA	False	NA	NA	NA	93776997	93836158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.62	chr11	+	5193	15	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-33	5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	45.5003924629856	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93776999	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.63	chr11	+	5277	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-33	-6	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	42.8555195459763	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93776999	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.64	chr11	+	5427	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-27	-9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	52.2875334967098	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTATTTTATCAATT	NA	False	NA	10	True	AATAAA	-11	NA	93777005	93837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795988_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.65	chr11	+	3642	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-23	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.5897063536794	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTAATGGAAAACCCC	NA	False	NA	NA	False	NA	NA	NA	93777009	93836158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799740_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.67	chr11	+	3506	16	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-23	-754	intron_retention	FALSE	canonical	3	43	junction_1	30.568974831064	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTAAACTGGAATGG	NA	False	NA	NA	False	ATTAAA	-14	NA	93777009	93835393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.68	chr11	+	3778	17	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-23	4	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	46.5731531437372	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAGAATGCTAATGGA	NA	False	NA	NA	False	NA	NA	NA	93777009	93836151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.69	chr11	+	5492	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	52.2836951169914	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATCAATTTTTCAA	NA	False	NA	16	True	AATAAA	-17	NA	93777009	93837808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814166_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.7	chr11	+	2326	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-24	1343	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	49.7793569162961	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTTAATTGACAGGAGA	NA	False	NA	NA	False	CATAAA	-27	NA	93776653	93824950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93776889_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.70	chr11	+	5369	16	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-22	-10	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	44.3414027743823	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTTATTTTATCAAT	NA	False	NA	9	True	AATAAA	-10	NA	93777010	93837801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.71	chr11	+	5259	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-31	4	-19	-4	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTATCAATTTTTCA	NA	False	NA	15	True	AATAAA	-16	NA	93777013	93837807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.72	chr11	+	5560	19	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	56.1909498007123	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATCAATTTTTCAA	NA	False	NA	16	True	AATAAA	-17	NA	93777013	93837808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834600
ES.5997.73	chr11	+	5625	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-19	5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	49.6230078348179	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTTTTCAACATTGATT	NA	False	NA	24	True	AATAAA	-25	NA	93777013	93837816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834487
ES.5997.74	chr11	+	5539	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-19	-6	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	53.2999607237077	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93777013	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.75	chr11	+	6482	13	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-10	-6	intron_retention	FALSE	canonical	0	0	junction_5	55.8024168134519	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93777022	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93795984_93796185_93799629_93801233_93803201_93803285_93812192_93812311_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.76	chr11	+	6253	15	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	19	junction_1	35.1982722210471	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93777024	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.77	chr11	+	2193	15	ISM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	-17	12872	-5	1332	5prime_fragment	FALSE	canonical	3	19	junction_1	36.2421701607283	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTAAGAAACAGTTTTAA	NA	False	NA	NA	False	CATAAA	-16	NA	93777027	93824939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706
ES.5997.78	chr11	+	4766	14	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	45.7520976335492	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTTTATTTTATCAATT	NA	False	NA	10	True	AATAAA	-11	NA	93777030	93837802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93823232_93823281_93824706_93824785_93834600
ES.5997.79	chr11	+	4988	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-4	-352	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	41.2407061984984	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGTCCCTGGGCAAAC	NA	False	NA	NA	False	AATAAA	-37	NA	93777038	93837459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.80	chr11	+	2838	17	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	-1	19519	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	50.6420881653788	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGAGAATATGTCACG	NA	False	NA	NA	False	NA	NA	NA	93777041	93857330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600_93835397_93857318
ES.5997.81	chr11	+	5396	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	58.0820920057526	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93777045	93837803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820441_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.82	chr11	+	3929	7	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	52.8236058342606	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATTTTTCAACATTGAT	NA	False	NA	23	True	AATAAA	-24	NA	93777046	93837815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93823232_93823281_93824706_93824785_93834600
ES.5997.84	chr11	+	5466	18	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	49.1158506187862	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTATTTTATCAATTT	NA	False	NA	11	True	AATAAA	-12	NA	93777046	93837803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93830346_93830539_93834600
ES.5997.85	chr11	+	5333	16	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5428925312982	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTTATTTTATCAAT	NA	False	NA	9	True	AATAAA	-10	NA	93777048	93837801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795988_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.86	chr11	+	2852	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	12	-754	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	44.0468500576375	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTAAACTGGAATGG	NA	False	NA	NA	False	ATTAAA	-14	NA	93777056	93835393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777243_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.87	chr11	+	5088	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	128	-7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	51.9569907605212	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTATTTTATCAATTTT	NA	False	NA	12	True	AATAAA	-13	NA	93777172	93837804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777243_93795984_93796170_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.88	chr11	+	5160	16	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	64	-10	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	39.3630396296944	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTTATTTTATCAAT	NA	False	NA	9	True	AATAAA	-10	NA	93777769	93837801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.89	chr11	+	3401	16	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	141	-22	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	30.568974831064	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93777846	93836125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.9	chr11	+	5278	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-23	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	43.6513459128124	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATTTTTCAACATTGAT	NA	False	NA	23	True	AATAAA	-24	NA	93776654	93837815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93776889_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.90	chr11	+	5022	16	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	141	-65	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	30.568974831064	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAAATAATTCACTAAA	NA	False	NA	-46	True	ATTAAA	-20	NA	93777846	93837746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.91	chr11	+	3340	1	NIC	ENSMUSG00000059474.14	novel	693	8	NA	NA	3512	-15210	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGAAGACATTGGTGCAG	NA	False	NA	NA	False	NA	NA	NA	93781217	93784557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93781200_93784600
ES.5997.92	chr11	+	4712	16	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	4458	-373	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	33.6009259131683	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	93782163	93837438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.93	chr11	+	4853	1	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-2990	-1926	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACGTATGAAAGGAAAGATA	NA	False	NA	NA	False	NA	NA	NA	93792988	93797841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93793000_93797800
ES.5997.94	chr11	+	5094	16	NNC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	-1101	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.1894333632547	301	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93799711	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93799764_93800569_93800683_93801108_93801233_93803201_93803285_93809656_93809774_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.95	chr11	+	4441	11	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	-39	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	44.260704919827	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATCAATTTTTCAACA	NA	False	NA	18	True	AATAAA	-19	NA	93803200	93837810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93803285_93812192_93812311_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ES.5997.96	chr11	+	4601	11	ISM	ENSMUSG00000059474.14	ENSMUST00000063718.11	3785	18	35149	-1658	-1701	-6	3prime_fragment	FALSE	canonical	3	17	junction_10	41.9065627318681	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93812191	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
ES.5997.97	chr11	+	6806	1	Genic_Genomic	ENSMUSG00000059474.14	novel	NA	NA	NA	NA	10617	-2359	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	93826982	93833788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_93827000_93833800
ES.5997.98	chr11	+	6157	2	NNC	ENSMUSG00000059474.14	novel	3675	3	NA	NA	11221	-6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTTTATCAATTTTT	NA	False	NA	13	True	AATAAA	-14	NA	93827586	93837805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93830539_93834600
ES.5997.99	chr11	+	103	1	Intergenic	novelGene_4833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATATGGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	93854175	93854278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_93854200_93854300
ES.5998.1	chr11	-	2507	7	ISM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	14173	10	4550	-10	3prime_fragment	TRUE	canonical	3	770	junction_1	36.2249913733599	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATTTACACATGCTT	NA	False	NA	NA	False	NA	NA	NA	93762419	93750078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305
ES.5998.12	chr11	-	1911	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-13	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	234.442534057171	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTGTACATGATTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	93776605	93750777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93751619_93751664_93752790_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.13	chr11	-	2651	13	NIC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-22	-709	intron_retention	FALSE	canonical	3	807	junction_11	43.3330128193275	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTGTACATGATTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	93776614	93750777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.15	chr11	-	4304	15	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	53	-709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	355.571120071036	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTGTACATGATTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	93776539	93750777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93764229_93766785_93766880_93767007_93768809_93768899_93769684_93769758_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.17	chr11	-	3776	13	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-47	-710	intron_retention	FALSE	canonical	0	0	junction_8	242.274451237068	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGTGTACATGATTTT	NA	False	NA	-13	True	AATAAA	-14	NA	93776639	93750778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767023_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.18	chr11	-	1787	13	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	22	-711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	243.908267706438	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776570	93750779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93752833_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.19	chr11	-	1867	15	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-342	-711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	226.737013893603	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776934	93750779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159_93776492_93776868
ES.5998.2	chr11	-	2626	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	-23	10	-23	-10	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATTTACACATGCTT	NA	False	NA	NA	False	NA	NA	NA	93776615	93750078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.20	chr11	-	3877	13	NIC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	15	-711	intron_retention	FALSE	canonical	3	770	junction_1	49.6528923852601	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776577	93750779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.21	chr11	-	3396	13	ISM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	57	711	57	-711	intron_retention	FALSE	canonical	3	770	junction_1	47.221919933673	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776535	93750779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492
ES.5998.22	chr11	-	2665	12	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-15	-711	intron_retention	TRUE	canonical	0	0	junction_5	337.324793824773	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776607	93750779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93766609_93766785_93766880_93767007_93768809_93769023_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.23	chr11	-	3691	13	NIC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	19	-713	intron_retention	FALSE	canonical	3	770	junction_1	51.1003234388546	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAATAAGTGTACATGAT	NA	False	NA	-16	True	AATAAA	-11	NA	93776573	93750781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.24	chr11	-	1579	11	ISM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	-65	7189	-65	-7189	5prime_fragment	FALSE	canonical	3	807	junction_9	47.1538969757538	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGTGTTACTTCCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	93776657	93757257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.25	chr11	-	1567	10	ISM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	55	8891	55	7249	5prime_fragment	FALSE	canonical	3	807	junction_8	49.1485528465852	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTAATGTATTTTCCT	NA	False	NA	NA	False	AAAACA	-24	NA	93776537	93758959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.4	chr11	-	2479	14	NNC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	-35	-162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	233.325914224119	413	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATATTTTGATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	93776627	93750230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766616_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.5	chr11	-	2257	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	-23	379	-23	-379	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGGCTCTAGCACCAA	NA	False	NA	NA	False	AATAAA	-23	NA	93776615	93750447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.6	chr11	-	2005	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	26	582	26	-582	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTCCTCCTGTGCACA	NA	False	NA	NA	False	AATAAA	-26	NA	93776566	93750650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ES.5998.8	chr11	-	2300	6	NIC	ENSMUSG00000054079.13	novel	2613	14	NA	NA	5411	-707	intron_retention	FALSE	canonical	3	770	junction_1	39.6635853144922	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTACATGATTTTTTT	NA	False	NA	-10	True	AATAAA	-17	NA	93761558	93750775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93760723_93761305
ES.5999.1	chr11	-	160	1	Intergenic	novelGene_4832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	93805991	93805831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_93805800_93806000
ES.6.1	chr1	-	3633	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTATTTTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	4730473	4726840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4726800_4730500
ES.6.2	chr1	-	2895	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTCCAACGTGATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	4730505	4727610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4727600_4730500
ES.60.1	chr1	+	2109	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	-53	-8	-53	8	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTTTGTAAGTTATTA	NA	False	NA	27	True	AATAAA	-27	NA	9615579	9617688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9615600_9617700
ES.600.1	chr1	-	126	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAACAA	NA	False	NA	NA	False	NA	NA	NA	60748025	60747899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60747900_60748000
ES.6000.1	chr11	-	1107	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	-42	-53	-42	53	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTCTATTTATTTACT	NA	False	NA	25	True	NA	NA	NA	93847127	93840586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ES.6000.10	chr11	-	1033	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	200	1948	-49	545	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTGGCCCAGGCCT	585	False	NA	-6	True	AATAAA	-12	NA	93859147	93849752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ES.6000.12	chr11	-	872	4	NIC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	-1	545	combination_of_known_splicesites	FALSE	canonical	3	65	junction_1	1765.26831451262	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTGGCCCAGGCCT	633	False	NA	-6	True	AATAAA	-12	NA	93859099	93849752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93850340_93854052_93854155_93856633_93856764_93859046
ES.6000.13	chr11	-	1033	5	NIC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	6	545	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1669.32808339164	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTTGGCCCAGGCCT	640	False	NA	-6	True	AATAAA	-12	NA	93859092	93849752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93850340_93851493_93851662_93854052_93854155_93856633_93856764_93859046
ES.6000.14	chr11	-	840	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	197	2144	-52	349	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGATTCTTTTCATT	582	False	NA	-4	True	NA	NA	NA	93859150	93849948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ES.6000.15	chr11	-	828	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	105	2248	105	245	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTACAGCTCTGCA	490	False	NA	-11	True	ATTAAA	-20	NA	93859242	93850052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ES.6000.16	chr11	-	1837	4	ISM	ENSMUSG00000091228.2	ENSMUST00000170303.2	991	8	22	9408	22	-9408	5prime_fragment	FALSE	canonical	3	3315	junction_3	756.619822338508	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTACAGCTCTGCA	635	False	NA	-11	True	ATTAAA	-20	NA	93859097	93850052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93851607_93854052_93854155_93856633_93856764_93859046
ES.6000.17	chr11	-	3008	5	NNC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	31	239	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1907.64658676601	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATTGCTGTACAGC	665	False	NA	-17	True	ATTAAA	-14	NA	93859067	93850058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93850340_93851493_93851607_93854052_93854162_93854279_93856764_93859046
ES.6000.18	chr11	-	766	6	NNC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	-1	239	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	2193.03254877806	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTATTGCTGTACAGC	633	False	NA	-17	True	ATTAAA	-14	NA	93859099	93850058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93857206_93857294_93859046
ES.6000.19	chr11	-	675	5	NNC	ENSMUSG00000037601.12	novel	3181	5	NA	NA	47	236	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_4	1945.72332308579	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTGTATTGCTGTAC	681	False	NA	-20	True	ATTAAA	-11	NA	93859051	93850061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93858999
ES.6000.3	chr11	-	1088	4	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	1	44	junction_3	3548.62013871433	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846501	93840639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93840873_93842725_93842839_93843625_93843728_93845861
ES.6000.4	chr11	-	4907	8	NIC	ENSMUSG00000091228.2	novel	991	8	NA	NA	-22	5	intron_retention	FALSE	canonical	3	3315	junction_7	1666.77626034235	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	591	False	NA	-28	True	NA	NA	NA	93859141	93840639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ES.6000.6	chr11	-	751	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-222	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2819.82964911003	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCAGTGTTCAGTACT	NA	False	NA	-30	True	NA	NA	NA	93846831	93840641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93840873_93842725_93842830_93843621_93843728_93846320_93846451_93846651
ES.6000.7	chr11	-	624	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	-96	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3104.44498864129	657	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCAGTGTTCAGTACT	NA	False	NA	-30	True	NA	NA	NA	93846705	93840641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93840873_93842725_93842839_93843625_93843722_93846320_93846451_93846651
ES.6000.8	chr11	-	1904	3	ISM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	1424	-1	1424	1	3prime_fragment	FALSE	canonical	3	6886	junction_1	611	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCAGTGTTCAGTACT	NA	False	NA	-30	True	NA	NA	NA	93845185	93840641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_93840873_93842725_93842839_93843625
ES.6000.9	chr11	-	4741	7	NNC	ENSMUSG00000091228.2	novel	991	8	NA	NA	20	1	intron_retention	FALSE	non_canonical	0	0	junction_6	2655.42367408459	1140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGCAGTGTTCAGTA	633	False	NA	-32	True	NA	NA	NA	93859099	93840643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93850340_93851493_93851607_93854052_93854165_93859046
ES.6001.1	chr11	-	354	1	Intergenic	novelGene_4834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	93869861	93869507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_93869500_93869900
ES.6002.10	chr11	+	7420	30	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	19.4184780284588	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	636	False	NA	7	True	TATAAA	-14	NA	93886888	94016909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93951083_93951126_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.11	chr11	+	4844	30	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-2	-2587	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.0622896376177	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAAGCCTGCTTCTC	662	False	NA	45	True	AATAAA	-33	NA	93886914	94014319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93887400_93904448_93904570_93915742_93915824_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997458_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.13	chr11	+	4498	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-10	2852	2	-2847	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAATAGAGTTTTCCC	666	False	NA	NA	False	AATAAA	-16	NA	93886918	94014059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.14	chr11	+	4296	28	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	2	-2842	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.581418001478	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAGAGTTTTCCCCAGTG	666	False	NA	NA	False	AATAAA	-21	NA	93886918	94014064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
ES.6002.17	chr11	+	7296	29	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	15.9093012840583	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTGTGAAGTCTAGT	670	False	NA	4	True	TATAAA	-11	NA	93886922	94016906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988551_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.19	chr11	+	8640	25	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	17553	0	intron_retention	FALSE	canonical	0	0	junction_21	21.4307265781323	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	5859	False	NA	7	True	TATAAA	-14	NA	93904481	94016909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93904570_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93999280_93999453_94002858_94005176_94007555_94007706_94013547
ES.6002.2	chr11	+	4813	29	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-66	-2590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	16.0580499870861	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTACGAAGCCTGCTT	598	False	NA	42	True	AATAAA	-30	NA	93886850	94014316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972214_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.20	chr11	+	3703	1	Intergenic	novelGene_4835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	93912198	93915901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_93912200_93915900
ES.6002.21	chr11	+	284	1	Intergenic	novelGene_4836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	93913488	93913772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_93913500_93913800
ES.6002.22	chr11	+	4411	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-163	2592	-13	-2587	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAAGCCTGCTTCTC	NA	False	NA	45	True	AATAAA	-33	NA	93934930	94014319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.23	chr11	+	6980	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-138	-2	12	2	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTCTAGTGTGGTTT	NA	False	NA	11	True	TATAAA	-18	NA	93934955	94016913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.24	chr11	+	3842	8	ISM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	-118	39464	32	-7608	intron_retention	FALSE	canonical	3	8	junction_1	22.895503524331	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGGAAATA	NA	False	NA	NA	False	NA	NA	NA	93934975	93977447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773
ES.6002.25	chr11	+	6914	27	NIC	ENSMUSG00000020859.17	novel	6910	27	NA	NA	24	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_23	22.1753367985737	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTGTGAAGTCTAGTG	NA	False	NA	5	True	TATAAA	-12	NA	93935054	94016907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
ES.6002.26	chr11	+	4091	25	NNC	ENSMUSG00000020859.17	novel	6840	26	NA	NA	-31	-2603	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	19.9738978975618	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAGAACTCTAAAGTTT	NA	False	NA	29	True	AATAAA	-17	NA	93935062	94014303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973619_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.28	chr11	+	1967	1	Intergenic	novelGene_4837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	93941658	93943625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_93941700_93943600
ES.6002.29	chr11	+	6226	23	NNC	ENSMUSG00000020859.17	novel	6840	26	NA	NA	-2729	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	17.1534759024866	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAGTCTAGTGTGGT	4437	False	NA	9	True	TATAAA	-16	NA	93959759	94016911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997458_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.3	chr11	+	7453	30	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-63	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	18.5369765764142	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGAAGTCTAGTGTGG	601	False	NA	8	True	TATAAA	-15	NA	93886853	94016910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
ES.6002.30	chr11	+	5999	21	ISM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	37069	5	-1451	0	3prime_fragment	FALSE	canonical	3	57	junction_7	6.61418929272515	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTGTGAAGTCTAGT	NA	False	NA	4	True	TATAAA	-11	NA	93972162	94016906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.32	chr11	+	3977	5	ISM	ENSMUSG00000020859.17	ENSMUST00000024979.15	6756	27	64088	0	25665	0	3prime_fragment	FALSE	canonical	3	69	junction_2	4.76969600708473	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	2734	False	NA	7	True	TATAAA	-14	NA	93999278	94016909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.33	chr11	+	4881	2	ISM	ENSMUSG00000020859.17	ENSMUST00000153076.2	5954	21	32574	1	32574	1	3prime_fragment	FALSE	canonical	3	81	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTGAAGTCTAGTGTGG	9643	False	NA	8	True	TATAAA	-15	NA	94006187	94016910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94007706_94013547
ES.6002.4	chr11	+	4770	29	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-61	-2593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	15.9093012840583	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAGTTTACGAAGCCTG	603	False	NA	39	True	AATAAA	-27	NA	93886855	94014313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988551_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.6	chr11	+	7414	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-72	-2	-60	2	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTCTAGTGTGGTTT	604	False	NA	11	True	TATAAA	-18	NA	93886856	94016913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.7	chr11	+	4842	30	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-52	-2596	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	18.5369765764142	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAAAGTTTACGAAGC	612	False	NA	36	True	AATAAA	-24	NA	93886864	94014310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
ES.6002.8	chr11	+	4803	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-55	2592	-43	-2587	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAAGCCTGCTTCTC	621	False	NA	45	True	AATAAA	-33	NA	93886873	94014319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6002.9	chr11	+	7648	32	NNC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	26.7578263226094	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGAAGTCTAGTGTG	625	False	NA	7	True	TATAAA	-14	NA	93886877	94016909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_93887400_93904448_93904570_93915742_93915824_93927425_93927497_93934397_93934493_93939233_93939385_93951083_93951126_93951210_93951347_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ES.6003.1	chr11	-	540	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	-50	-79	-50	79	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGTTAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	93928504	93927964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_93928000_93928500
ES.6003.2	chr11	-	264	2	Genic_Genomic	ENSMUSG00000081604.6	novel	411	1	NA	NA	-39	22	multi-exon	TRUE	non_canonical	0	0	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTAAAAAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	93928493	93928021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_93928231_93928438
ES.6004.1	chr11	+	525	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	-53	1	-36	-1	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGTTTACCTGCTTGT	NA	False	NA	14	True	AATAAA	-21	NA	94024274	94046601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
ES.6004.2	chr11	+	550	5	NNC	ENSMUSG00000086003.8	novel	695	6	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.6616356744338	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTATTAGTGTTTACCT	NA	False	NA	8	True	AATAAA	-15	NA	94024310	94046595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94024382_94029312_94029482_94042163_94042239_94046281_94046324_94046402
ES.6004.3	chr11	+	518	5	NIC	ENSMUSG00000086003.8	novel	695	6	NA	NA	23	-7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	57.7711000414567	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTATTAGTGTTTACCT	NA	False	NA	8	True	AATAAA	-15	NA	94024350	94046595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94024382_94029312_94029490_94042163_94042239_94046281_94046324_94046402
ES.6004.4	chr11	+	129	1	Intergenic	novelGene_4838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94032968	94033097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94033000_94033100
ES.6004.5	chr11	+	539	4	NNC	ENSMUSG00000086003.8	novel	695	6	NA	NA	14237	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.7314960380734	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCGTATTAGTGTTTAC	NA	False	NA	6	True	AATAAA	-13	NA	94040722	94046593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94040954_94042163_94042239_94046281_94046324_94046402
ES.6004.6	chr11	+	1951	1	NIC	ENSMUSG00000086003.8	novel	695	6	NA	NA	15599	-2567	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	94042084	94044035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94042100_94044000
ES.6004.7	chr11	+	1747	2	NNC	ENSMUSG00000086003.8	novel	695	6	NA	NA	15601	-2544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTAGCAAAATTACAGTT	NA	False	NA	NA	False	AAAAAG	-35	NA	94042086	94044058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94043271_94043495
ES.6004.8	chr11	+	1759	2	NNC	ENSMUSG00000086003.8	novel	695	6	NA	NA	15700	-2544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTAGCAAAATTACAGTT	NA	False	NA	NA	False	AAAAAG	-35	NA	94042185	94044058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94043273_94043386
ES.6005.1	chr11	-	7247	2	Antisense	novelGene_ENSMUSG00000086003.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCAGGTATGCGTGAACG	9390	False	NA	NA	False	NA	NA	NA	94028278	94019724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_94021145_94022451
ES.6005.2	chr11	-	1476	2	Antisense	novelGene_ENSMUSG00000086003.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACAGGTGTCAGGTATG	8263	False	NA	NA	False	NA	NA	NA	94029405	94019732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_94021142_94029338
ES.6005.3	chr11	-	1568	3	Antisense	novelGene_ENSMUSG00000086003.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACAGGTGTCAGGTATG	8263	False	NA	NA	False	NA	NA	NA	94029405	94019732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_94021142_94022451_94022544_94029338
ES.6006.1	chr11	+	174	1	Intergenic	novelGene_4839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTCAAGT	NA	False	NA	NA	False	NA	NA	NA	94093683	94093857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94093700_94093900
ES.6007.1	chr11	+	2197	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1606	-11	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAAAATGCCTATCC	NA	False	NA	NA	False	ATTAAA	-8	NA	94100673	94106310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94100872_94104311
ES.6007.2	chr11	+	6381	1	Genic_Genomic	ENSMUSG00000037573.6	novel	NA	NA	NA	NA	-73	2266	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGCTGGTGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	94102206	94108587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_94102200_94108600
ES.6007.3	chr11	+	2317	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-18	-11	-18	11	multi-exon	FALSE	canonical	3	252	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTTGTTTTAAGTCTT	NA	False	NA	NA	False	ATTAAA	-30	NA	94102261	94106332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94102558_94104311
ES.6007.4	chr11	+	2183	3	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-15	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	126	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTTGTTTTAAGTCTT	NA	False	NA	NA	False	ATTAAA	-30	NA	94102264	94106332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94102558_94104311_94105113_94105243
ES.6007.6	chr11	+	4055	1	Genic_Genomic	ENSMUSG00000037573.6	novel	NA	NA	NA	NA	-13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	94102266	94106321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_94102300_94106300
ES.6007.7	chr11	+	4564	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	-10	-2266	-10	2266	multi-exon	FALSE	canonical	3	252	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGCTGGTGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	94102269	94108587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94102558_94104311
ES.6007.8	chr11	+	2061	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	17	-11	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAAAATGCCTATCC	NA	False	NA	NA	False	ATTAAA	-8	NA	94102296	94106310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94102359_94104311
ES.6008.1	chr11	+	176	1	Intergenic	novelGene_4840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	94108591	94108767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94108600_94108800
ES.6009.1	chr11	-	294	1	Intergenic	novelGene_4841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTTCAAATGATCCAAT	NA	False	NA	NA	False	NA	NA	NA	94145388	94145094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94145100_94145400
ES.601.1	chr1	+	184	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	60875947	60876131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60875900_60876100
ES.6010.1	chr11	+	2335	2	Antisense	novelGene_ENSMUSG00000020863.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAGAAAACTTCCTAGC	NA	False	NA	NA	False	NA	NA	NA	94189932	94193342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94191736_94192810
ES.6010.2	chr11	+	1865	1	Antisense	novelGene_ENSMUSG00000020863.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAGATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	94189937	94191802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94189900_94191800
ES.6010.3	chr11	+	3401	1	Antisense	novelGene_ENSMUSG00000020863.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGTAAGAAAACTTCC	NA	False	NA	NA	False	NA	NA	NA	94189937	94193338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94189900_94193300
ES.6010.4	chr11	+	3123	2	Antisense	novelGene_ENSMUSG00000020863.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAGTTAAACA	NA	False	NA	NA	False	NA	NA	NA	94193066	94198136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94196016_94197962
ES.6010.5	chr11	+	180	1	Intergenic	novelGene_4843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGTAATTCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	94195636	94195816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94195600_94195800
ES.6011.1	chr11	+	183	1	Intergenic	novelGene_4844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94198159	94198342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94198200_94198300
ES.6012.1	chr11	-	7500	1	Genic_Genomic	ENSMUSG00000020863.16	novel	NA	NA	NA	NA	1743	65	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTTCTCCTTTTATTC	NA	False	NA	NA	False	GATAAA	-38	NA	94186150	94178650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_94178600_94186200
ES.6012.10	chr11	-	3643	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	67	-232	-26	154	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGCATAGTGAACTGC	NA	False	NA	NA	False	AATAAA	-22	NA	94212747	94181732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.11	chr11	-	1515	6	ISM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	21985	-148	228	148	3prime_fragment	FALSE	canonical	3	229	junction_1	27.1101457023012	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCAAAGGTGCATAGTG	NA	False	NA	NA	False	AATAAA	-16	NA	94190829	94181738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781
ES.6012.12	chr11	-	2041	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	-6	15	-6	-15	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTCTCTTGTTTTAAA	NA	False	NA	58	True	AATAAA	-12	NA	94212820	94181901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.13	chr11	-	3526	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	-46	-2	-46	2	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	-3	True	AATAAA	-25	NA	94212860	94181962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.14	chr11	-	3595	11	NNC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	14	junction_5	100.65689246147	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	-3	True	AATAAA	-25	NA	94212783	94181962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189775_94189922_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.15	chr11	-	3360	12	NNC	ENSMUSG00000020863.16	novel	3373	11	NA	NA	-8	2	intron_retention	FALSE	canonical	0	0	junction_10	109.688062588324	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTGTCTGTGTCATTG	NA	False	NA	-3	True	AATAAA	-25	NA	94212729	94181962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94199370_94199441_94200450_94200518_94212515
ES.6012.17	chr11	-	3444	11	NNC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	13	0	intron_retention	FALSE	canonical	1	6	junction_4	103.196899178221	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212708	94181964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189849_94189922_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.19	chr11	-	1943	2	ISM	ENSMUSG00000020863.16	ENSMUST00000107822.10	1601	10	28731	-1634	59	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGATTGTCTGTGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	94183990	94181965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94183882_94183963
ES.6012.2	chr11	-	5467	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	-186	-3231	-186	60	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACACTTTCTCCTTT	NA	False	NA	NA	False	GATAAA	-33	NA	94213000	94178655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.20	chr11	-	3495	12	NNC	ENSMUSG00000020863.16	novel	3373	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	3	14	junction_6	104.554307925523	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGATTGTCTGTGTCA	NA	False	NA	-6	True	AATAAA	-22	NA	94212791	94181965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189775_94189922_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.21	chr11	-	1492	7	NNC	ENSMUSG00000020863.16	novel	2050	11	NA	NA	169	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_6	119.487330802149	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGATTGTCTGTGTC	NA	False	NA	-7	True	AATAAA	-21	NA	94190888	94181966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189775_94189922_94190781
ES.6012.22	chr11	-	3347	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	23	3	-7	-3	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTTGATTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	94212791	94181967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.23	chr11	-	1989	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	3	3252	3	-3	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTTGATTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	94212781	94181967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.26	chr11	-	4675	1	NIC	ENSMUSG00000020863.16	novel	5244	12	NA	NA	1248	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTTGATTGTCTG	NA	False	NA	-11	True	AATAAA	-17	NA	94186645	94181970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94182000_94186600
ES.6012.27	chr11	-	4145	4	ISM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	22663	7	-294	-7	3prime_fragment	FALSE	canonical	3	252	junction_3	18.4028983224563	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGAGTTGATTGTCT	NA	False	NA	-12	True	AATAAA	-16	NA	94190151	94181971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584
ES.6012.28	chr11	-	3520	11	NNC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	-20	-7	intron_retention	FALSE	canonical	1	2	junction_2	99.5250722180095	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGAGTTGATTGTCT	NA	False	NA	-12	True	AATAAA	-16	NA	94212741	94181971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94184105_94185077_94185200_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.29	chr11	-	2104	12	NIC	ENSMUSG00000020863.16	novel	5244	12	NA	NA	-8	-7	intron_retention	FALSE	canonical	2	19	junction_1	95.2167601053443	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGAGTTGATTGTCT	NA	False	NA	-12	True	AATAAA	-16	NA	94212729	94181971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94182405_94183232_94183299_94183752_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.3	chr11	-	6699	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	28	-3249	-2	0	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGGTGTAGGTAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	94212786	94178715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.30	chr11	-	1824	12	NNC	ENSMUSG00000020863.16	novel	2050	11	NA	NA	168	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	95.1356578178222	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGCAGAGTTGATTGT	NA	False	NA	-14	True	AATAAA	-14	NA	94212553	94181973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94182405_94183910_94184105_94185077_94185200_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.31	chr11	-	1730	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	85	235	-8	33	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTTTACTTGCAAGT	NA	False	NA	NA	False	AAGAAA	-23	NA	94212729	94182121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.32	chr11	-	1748	1	NIC	ENSMUSG00000020863.16	novel	5244	12	NA	NA	170	23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCTTGCTCAGTGTTT	NA	False	NA	NA	False	AAGAAA	-13	NA	94183879	94182131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94182100_94183900
ES.6012.33	chr11	-	1650	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	52	348	22	-80	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGATTTCAGAACATGTG	NA	False	NA	NA	False	ATTAAA	-26	NA	94212762	94182234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.34	chr11	-	1709	2	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	28759	277	-6	-87	3prime_fragment	FALSE	canonical	3	68	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCTACCAGATTTCAGA	NA	False	NA	NA	False	ATTAAA	-19	NA	94184055	94182241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94183859_94183963
ES.6012.35	chr11	-	2300	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	59	1014	29	621	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGCCTTGTTACATTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	94212755	94182978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.36	chr11	-	1399	8	ISM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	59	5464	29	404	5prime_fragment	FALSE	canonical	3	230	junction_7	21.9981446341945	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGACTGATGGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	94212755	94187428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.37	chr11	-	174	1	Intergenic	novelGene_4842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGTTA	NA	False	NA	NA	False	NA	NA	NA	94190644	94190470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94190500_94190600
ES.6012.38	chr11	-	3977	1	Intergenic	novelGene_4845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAATACAGTTTTGGTGT	NA	False	NA	NA	False	NA	NA	NA	94207105	94203128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94203100_94207100
ES.6012.39	chr11	-	3388	1	Intergenic	novelGene_4846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTAGGCTTGGTGGCAC	NA	False	NA	NA	False	TATAAA	-23	NA	94208301	94204913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94204900_94208300
ES.6012.4	chr11	-	5190	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	54	0	-9	0	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGGTGTAGGTAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	94212730	94178715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6012.5	chr11	-	1085	6	NNC	ENSMUSG00000020863.16	novel	2050	11	NA	NA	421	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.917583520752	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACTTGGTGTAGGTA	NA	False	NA	NA	False	AATAAA	-20	NA	94188623	94178719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94179059_94182336_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584
ES.6012.7	chr11	-	3277	3	NNC	ENSMUSG00000020863.16	novel	397	3	NA	NA	8	-7	intron_retention	FALSE	non_canonical	0	0	junction_1	126	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAAGGACTTGGTGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	94189849	94178722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94180654_94187912_94187994_94188584
ES.6012.8	chr11	-	5997	4	NIC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	-15	434	intron_retention	FALSE	canonical	3	19	junction_3	119.802615441678	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCAGCATGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	94189872	94181452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94186907_94187709_94187994_94188584_94188747_94189775
ES.6012.9	chr11	-	3858	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	25	-510	-5	432	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTAGCAGCATGTTTGT	NA	False	NA	NA	False	NA	NA	NA	94212789	94181454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ES.6013.1	chr11	+	176	1	Intergenic	novelGene_4847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	374	False	NA	NA	False	NA	NA	NA	94215206	94215382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94215200_94215400
ES.6014.1	chr11	+	178	1	Intergenic	novelGene_4848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	1140	False	NA	NA	False	NA	NA	NA	94215972	94216150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94216000_94216200
ES.6015.1	chr11	-	132	1	Intergenic	novelGene_4849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94216754	94216622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94216600_94216800
ES.6016.1	chr11	+	3498	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	-7	-4	-7	4	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTCTCTCTCGTTTTGC	3987	False	NA	21	True	ATTAAA	-22	NA	94218819	94232671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.10	chr11	+	3771	5	FSM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	-224	-2332	17	0	multi-exon	FALSE	canonical	3	24	junction_4	194.973075064225	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCATTCTCTCTCGTT	4023	False	NA	17	True	ATTAAA	-18	NA	94218855	94232667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065
ES.6016.11	chr11	+	1430	5	FSM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	-210	-5	31	5	multi-exon	FALSE	canonical	3	24	junction_4	194.973075064225	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATTTTAATCCAT	4037	False	NA	NA	False	AATAAA	-15	NA	94218869	94230340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065
ES.6016.12	chr11	+	3672	6	NNC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	226.413250495637	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCCATTCTCTCTCG	4037	False	NA	15	True	ATTAAA	-16	NA	94218869	94232665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065_94230296_94230378
ES.6016.13	chr11	+	3404	5	NNC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	212.552787561114	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCCATTCTCTCTCG	4044	False	NA	15	True	ATTAAA	-16	NA	94218876	94232665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94219214_94224726_94224876_94225253_94225734_94229196_94229348_94230378
ES.6016.14	chr11	+	2166	5	FSM	ENSMUSG00000020864.14	ENSMUST00000051221.13	1477	5	40	-729	40	504	multi-exon	TRUE	canonical	3	12	junction_4	200.158687046054	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGAATCTGTTGCTT	4046	False	NA	23	True	GATAAA	-33	NA	94218878	94231478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230458
ES.6016.15	chr11	+	1215	3	ISM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	-200	4350	41	576	5prime_fragment	FALSE	canonical	3	477	junction_2	6	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCTAAACTGAGAGTCCA	4047	False	NA	NA	False	NA	NA	NA	94218879	94225985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94219214_94224726_94224876_94225253
ES.6016.16	chr11	+	3425	5	NNC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	248.564377978825	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCCATTCTCTCTCGT	4047	False	NA	16	True	ATTAAA	-17	NA	94218879	94232666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94219214_94224726_94224876_94225259_94225734_94229167_94229348_94230378
ES.6016.19	chr11	+	8595	4	ISM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	402	3	149	-3	3prime_fragment	FALSE	canonical	3	454	junction_2	20.8539897594894	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGCCCATTCTCTCTC	4396	False	NA	14	True	ATTAAA	-15	NA	94219228	94232664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.2	chr11	+	1579	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	-5	1913	-5	5	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGTAGTCTTGAGAGGC	3989	False	NA	25	True	AATAAA	-25	NA	94218821	94230754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.20	chr11	+	4989	4	ISM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	4068	-2329	-1131	-3	3prime_fragment	FALSE	canonical	3	24	junction_3	208.336799971158	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGCCCATTCTCTCTC	8315	False	NA	14	True	ATTAAA	-15	NA	94223147	94232664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94224876_94225253_94225734_94229165_94229348_94230065
ES.6016.21	chr11	+	877	2	FSM	ENSMUSG00000020864.14	ENSMUST00000124087.2	828	2	-278	229	-278	-4	multi-exon	FALSE	canonical	3	505	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGCTGGAAAGTAGTC	NA	False	NA	16	True	AATAAA	-16	NA	94228837	94230745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94229348_94230378
ES.6016.3	chr11	+	3043	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	-5	449	-5	-449	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGGGTTGAGACTCCT	3989	False	NA	NA	False	AATAAA	-24	NA	94218821	94232218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.4	chr11	+	1926	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	5	1556	5	137	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGAGCTTCCCCTCCCC	3999	False	NA	NA	False	AATATA	-29	NA	94218831	94231111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.5	chr11	+	5555	1	NIC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	5	-1023	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCCCCCCAAAAAAAAAGA	3999	False	NA	NA	False	NA	NA	NA	94218831	94224386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94218800_94224400
ES.6016.6	chr11	+	2288	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	9	1190	-3	503	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGGAATCTGTTGCT	4003	False	NA	22	True	GATAAA	-32	NA	94218835	94231477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.7	chr11	+	3114	5	NNC	ENSMUSG00000020864.14	novel	3487	5	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.054079508189	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCCATTCTCTCTCG	4014	False	NA	15	True	ATTAAA	-16	NA	94218846	94232665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94218863_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ES.6016.8	chr11	+	4495	4	ISM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	21	2	9	-2	intron_retention	FALSE	canonical	3	454	junction_3	14.522013940528	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCCCATTCTCTCTCG	4015	False	NA	15	True	ATTAAA	-16	NA	94218847	94232665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165
ES.6017.1	chr11	+	1058	3	Antisense	novelGene_ENSMUSG00000020865.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACACCAAGGAGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	94234175	94242198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94234601_94236771_94236973_94241766
ES.6018.1	chr11	-	6972	24	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-2827	2712	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	26.3982155552048	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGTTTCCCACAATAA	NA	False	NA	NA	False	AATAAA	-16	NA	94261576	94231408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249577_94249889_94250066_94250275_94250352_94250501_94250654_94250770_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94261265
ES.6018.10	chr11	-	5003	31	FSM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	-1	3	-1	0	multi-exon	FALSE	canonical	1	1	junction_29	23.7014064280301	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGGGTCACATGTTAC	NA	False	NA	-7	True	AATAAA	-14	NA	94283803	94234123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249577_94249889_94250066_94250275_94250352_94250501_94250654_94250770_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262634_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366_94266544_94283696
ES.6018.11	chr11	-	4412	23	ISM	ENSMUSG00000020865.17	ENSMUST00000021231.8	4999	31	-2	14468	-2	6444	5prime_fragment	FALSE	canonical	1	1	junction_21	2.87228132326901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATTTGAATATGATC	NA	False	NA	NA	False	AATAGA	-15	NA	94283804	94248591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94249889_94250066_94250275_94250352_94250501_94250654_94250767_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262634_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366_94266544_94283696
ES.6018.12	chr11	-	181	1	Intergenic	novelGene_4850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCTTAAAACAATA	NA	False	NA	NA	False	NA	NA	NA	94278228	94278047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94278000_94278200
ES.6018.2	chr11	-	3603	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-242	2711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.2400547137693	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAGTTTCCCACAATA	693	False	NA	NA	False	AATAAA	-15	NA	94242254	94231409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242205
ES.6018.3	chr11	-	3435	5	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40789	-2325	-1001	2325	3prime_fragment	FALSE	canonical	3	20	junction_4	28.5164426252645	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAAGTTAAGTTTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	94243013	94231795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905
ES.6018.4	chr11	-	4863	31	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.7622716833967	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	94283795	94234120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249712_94249889_94250066_94250275_94250352_94250501_94250654_94250770_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262634_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366_94266544_94283696
ES.6018.5	chr11	-	4212	24	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-2827	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.4184016751571	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	94261576	94234120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249619_94249889_94250066_94250275_94250352_94250501_94250654_94250767_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94261268
ES.6018.6	chr11	-	4511	25	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-4443	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.9478309412474	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	94263192	94234120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249577_94249889_94250066_94250275_94250352_94250501_94250654_94250767_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262634_94262816
ES.6018.8	chr11	-	919	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-270	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.2400547137693	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTCACATGTTACCT	665	False	NA	-5	True	AATAAA	-16	NA	94242282	94234121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242205
ES.6018.9	chr11	-	4235	24	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-2806	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	26.3493327162866	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGTCACATGTTACCT	NA	False	NA	-5	True	AATAAA	-16	NA	94261555	94234121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624_94242784_94242905_94243053_94245838_94245941_94247798_94247926_94248032_94248233_94249577_94249889_94250066_94250275_94250352_94250501_94250654_94250770_94251997_94252176_94252475_94252644_94254258_94254436_94254522_94254650_94254867_94254935_94255177_94255266_94255598_94255746_94255851_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94261268
ES.6019.1	chr11	+	224	1	Intergenic	novelGene_4851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCATTTTGTGAGTAC	NA	False	NA	NA	False	NA	NA	NA	94293080	94293304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94293100_94293300
ES.602.1	chr1	-	2796	4	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGTCCAAGAGCCATG	1187	False	NA	NA	False	ATTAAA	-24	NA	60885914	60863077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60865348_60870050_60870366_60872135_60872228_60885795
ES.6020.1	chr11	-	7606	35	FSM	ENSMUSG00000020866.18	ENSMUST00000107790.8	8035	35	14	415	14	-170	multi-exon	TRUE	canonical	0	0	junction_1	0.283636787088028	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATATGCTGGATGTACG	6834	False	NA	NA	False	ATTAAA	-12	NA	94364912	94299631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94300703_94301856_94302027_94302264_94302443_94306568_94306926_94307231_94307354_94307451_94307531_94307666_94307738_94307980_94308115_94308856_94308967_94309644_94309797_94314496_94314551_94316610_94316804_94317242_94317333_94318206_94318333_94319875_94320003_94320920_94321106_94321271_94321341_94323284_94323409_94323519_94323621_94324526_94324959_94328654_94328852_94328930_94329016_94333555_94333712_94333790_94333906_94334000_94334187_94334852_94335005_94347785_94348163_94349919_94350704_94352718_94352812_94352976_94353278_94354167_94354328_94356224_94356323_94356646_94356781_94356941_94357054_94364201
ES.6021.1	chr11	-	4728	6	NIC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	163	0	intron_retention	FALSE	canonical	3	17	junction_5	9.64572444142999	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGTAGCTCCTCCTT	3414	False	NA	1	True	AATAAA	-20	NA	94439862	94430623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6021.10	chr11	-	177	1	Intergenic	novelGene_4852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGTTAATTTAA	6687	False	NA	NA	False	NA	NA	NA	94436589	94436412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94436400_94436600
ES.6021.2	chr11	-	4198	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-56	1	0	-1	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCGTAGCTCCTCCT	3195	False	NA	0	True	AATAAA	-19	NA	94440081	94430624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6021.3	chr11	-	4289	8	NIC	ENSMUSG00000039096.11	novel	4203	9	NA	NA	-198	-4	intron_retention	FALSE	canonical	0	0	junction_6	14.1997413026162	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGACCTGCGTAGCTCCT	3460	False	NA	-3	True	AATAAA	-16	NA	94439816	94430627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94439003_94439190_94439296
ES.6021.4	chr11	-	1700	10	NNC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.7143352554372	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGACCTGCGTAGC	3258	False	NA	-7	True	AATAAA	-12	NA	94440018	94430631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94430856_94433283_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6021.5	chr11	-	2134	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	-18	2027	-18	-2027	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCTATGTATGTCTCAT	3233	False	NA	NA	False	NA	NA	NA	94440043	94432650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6021.6	chr11	-	2354	8	NIC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	-6	-2028	intron_retention	FALSE	canonical	3	12	junction_2	9.92420253311909	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCTATGTATGTCTCA	3245	False	NA	NA	False	NA	NA	NA	94440031	94432651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6021.7	chr11	-	3630	4	NIC	ENSMUSG00000039096.11	novel	4203	9	NA	NA	-6	-2028	intron_retention	FALSE	canonical	0	0	junction_2	18.5711843695788	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCTATGTATGTCTCA	3245	False	NA	NA	False	NA	NA	NA	94440031	94432651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94434995_94435245_94435612_94439003_94439190_94439296
ES.6021.8	chr11	-	2373	8	NNC	ENSMUSG00000039096.11	novel	4203	9	NA	NA	140	-2097	intron_retention	FALSE	canonical	0	0	junction_1	14.3099793921613	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAGAAATAAATC	3391	False	NA	NA	False	NA	NA	NA	94439885	94432720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94434041_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439804
ES.6021.9	chr11	-	1621	10	NNC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	42	-2097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3620062070238	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAGAAATAAATC	3293	False	NA	NA	False	NA	NA	NA	94439983	94432720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94432962_94433150_94433280_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ES.6022.1	chr11	+	156	1	Intergenic	novelGene_4853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	94472917	94473073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94472900_94473100
ES.6023.1	chr11	+	626	2	Antisense	novelGene_ENSMUSG00000076435.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAACGAAGAAAGCT	NA	False	NA	NA	False	AATAAA	-15	NA	94481713	94483135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94481768_94482563
ES.6024.1	chr11	+	131	1	Intergenic	novelGene_4854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAACTAAAAATTATAGA	NA	False	NA	NA	False	NA	NA	NA	94495174	94495305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94495200_94495300
ES.6025.4	chr11	-	3274	18	NNC	ENSMUSG00000076435.4	novel	3154	16	NA	NA	-15880	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	21.1101903925167	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCCTGATTGGACTGT	1580	False	NA	-9	True	AATAAA	-14	NA	94508577	94447932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468_94492633_94493139_94493251_94508498
ES.6025.5	chr11	-	4204	12	NIC	ENSMUSG00000076435.4	novel	3154	16	NA	NA	-37	-25	intron_retention	FALSE	canonical	3	47	junction_5	9.64836302648844	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCAAAACAAATCC	7350	False	NA	-29	True	NA	NA	NA	94492632	94447952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94449184_94449465_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
ES.6025.6	chr11	-	152	1	Intergenic	novelGene_4855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAACCTT	3956	False	NA	NA	False	NA	NA	NA	94506201	94506049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94506000_94506200
ES.6026.1	chr11	+	2899	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-54	-8	-54	8	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGTGCTGTGAGGGTC	NA	False	NA	35	True	ATTAAA	-26	NA	94520538	94536050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.11	chr11	+	1457	1	NIC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	3	-4026	mono-exon	FALSE	NA	NA	NA	NA	NA	1754	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAAGACAAAGAATTGGA	NA	False	NA	NA	False	NA	NA	NA	94520595	94522052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94520600_94522100
ES.6026.13	chr11	+	1409	6	NIC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	5	-1350	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	1049.8570569368	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACATTTATACTTTTG	NA	False	NA	-20	True	ACTAAA	-11	NA	94520597	94534692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94532045_94532220_94534119
ES.6026.15	chr11	+	2821	7	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	986.721620091277	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520599	94536042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529365_94529430_94532045_94532220_94534119
ES.6026.18	chr11	+	2530	8	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	937.789563444871	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTTTCTCCTTTGTG	NA	False	NA	24	True	ATTAAA	-15	NA	94520604	94536039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119_94535031_94535322
ES.6026.19	chr11	+	1658	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	12	1167	12	-1167	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCCAAAATGTCTGGCT	NA	False	NA	NA	False	TTTAAA	-26	NA	94520604	94534875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.2	chr11	+	3091	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-20	-234	-20	234	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTGCGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	94520572	94536276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.20	chr11	+	3182	7	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1009.11490370963	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520609	94536042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94533757
ES.6026.21	chr11	+	4719	6	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	18	0	18	0	intron_retention	FALSE	canonical	3	2572	junction_2	97.4379802746342	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520610	94536042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045
ES.6026.22	chr11	+	6334	6	NIC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	18	1	intron_retention	FALSE	canonical	3	2480	junction_5	112.781913443601	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTCCTTTGTGCTGT	NA	False	NA	28	True	ATTAAA	-19	NA	94520610	94536043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94529430_94532045_94532220_94534119
ES.6026.23	chr11	+	1573	8	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	-23	-1285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1192.921076131	1843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGGAGGGCAGTGTGTTA	NA	False	NA	45	True	CATAAA	-35	NA	94520616	94534757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94525924_94525970_94529356_94529430_94532045_94532220_94534119
ES.6026.26	chr11	+	2524	5	NNC	ENSMUSG00000020869.9	novel	856	4	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1156.42409500148	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTTTCTCCTTTGTGC	NA	False	NA	25	True	ATTAAA	-16	NA	94520618	94536040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525849_94534163
ES.6026.27	chr11	+	1883	8	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	937.789563444871	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTTCTCCTTTGTGCT	NA	False	NA	26	True	ATTAAA	-17	NA	94520621	94536041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119_94534579_94535502
ES.6026.29	chr11	+	2720	8	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	937.789563444871	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520622	94536042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119_94535304_94535390
ES.6026.3	chr11	+	1867	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-18	988	-18	-988	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACCAGAGTTGTCTCAG	NA	False	NA	NA	False	NA	NA	NA	94520574	94535054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.31	chr11	+	2777	7	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	996.005424460909	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTTTCTCCTTTGTGC	NA	False	NA	25	True	ATTAAA	-16	NA	94520636	94536040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532059_94532220_94534119
ES.6026.32	chr11	+	2482	7	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1009.11490370963	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCCTTTCTCCTTTGTG	NA	False	NA	24	True	ATTAAA	-15	NA	94520639	94536039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532192_94534396
ES.6026.34	chr11	+	3678	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	57	-898	10	898	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGCCAGTTTGAGTC	NA	False	NA	NA	False	ACTAAA	-43	NA	94520649	94536940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.4	chr11	+	1570	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-18	1285	-18	-1285	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGGAGGGCAGTGTGTTA	NA	False	NA	45	True	CATAAA	-35	NA	94520574	94534757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.5	chr11	+	1281	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	-9	1565	-9	-1565	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTGGTGGTACTTG	NA	False	NA	NA	False	NA	NA	NA	94520583	94534477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ES.6026.7	chr11	+	5425	4	FSM	ENSMUSG00000020869.9	ENSMUST00000138782.2	856	4	-46	-4523	1	4523	multi-exon	FALSE	canonical	3	2572	junction_2	105.28163288163	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCAAGCAAGCAAACAA	NA	False	NA	NA	False	NA	NA	NA	94520593	94530601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737
ES.6026.8	chr11	+	2297	4	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1220.30497098972	1859	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520594	94536042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94520936_94522906_94522967_94525370_94525403_94534178
ES.6027.1	chr11	+	853	4	FSM	ENSMUSG00000024414.14	ENSMUST00000132813.8	655	4	-16	-182	-7	11	multi-exon	FALSE	canonical	3	14	junction_1	381.100453365718	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGACAGGTGGCTGCTTC	NA	False	NA	30	True	NA	NA	NA	94544585	94550926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94544668_94547233_94547445_94547808_94547877_94550434
ES.6027.10	chr11	+	850	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-29	-382	-9	10	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGACAGGTGGCTGCTT	NA	False	NA	29	True	NA	NA	NA	94544827	94550925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
ES.6027.2	chr11	+	2828	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	-4	-2068	-4	2068	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTACTCAGAACTACTG	NA	False	NA	NA	False	AAAACA	-4	NA	94544588	94552983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ES.6027.3	chr11	+	767	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	0	-11	0	11	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGACAGGTGGCTGCTTC	NA	False	NA	30	True	NA	NA	NA	94544592	94550926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ES.6027.4	chr11	+	603	3	NIC	ENSMUSG00000024414.14	novel	756	4	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	378	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	False	NA	9	True	NA	NA	NA	94544603	94550905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94544668_94547808_94547877_94550434
ES.6027.5	chr11	+	535	2	NIC	ENSMUSG00000024414.14	novel	756	4	NA	NA	2	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	False	NA	9	True	NA	NA	NA	94544603	94550905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94544668_94550434
ES.6027.6	chr11	+	3244	4	NNC	ENSMUSG00000024414.14	novel	756	4	NA	NA	7	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	388.232748060576	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	False	NA	9	True	NA	NA	NA	94544608	94550905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94544668_94547312_94547445_94547808_94548715_94548758
ES.6027.7	chr11	+	717	4	NNC	ENSMUSG00000024414.14	novel	756	4	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.660504393557	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	False	NA	9	True	NA	NA	NA	94544613	94550905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_94544660_94547312_94547445_94547808_94547877_94550434
ES.6027.8	chr11	+	5338	3	ISM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	44	-2068	35	2068	intron_retention	FALSE	canonical	3	769	junction_1	50	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTACTCAGAACTACTG	NA	False	NA	NA	False	AAAACA	-4	NA	94544636	94552983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94544668_94547312_94547445_94547808
ES.6027.9	chr11	+	2692	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-30	-2223	-10	1851	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	ATTAAA	-12	NA	94544826	94552766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
ES.6028.1	chr11	-	4601	2	Antisense	novelGene_ENSMUSG00000020869.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-23	NA	94528042	94523233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_94525528_94525735
ES.6029.1	chr11	-	3051	12	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-59	2617	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	82.6564132093094	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGACTCTAGCTGGGCGG	4637	False	NA	NA	False	NA	NA	NA	94544556	94533204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94534344_94534464_94534541_94535315_94535374_94536253_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ES.6029.10	chr11	-	3438	11	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	105.684625182663	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4684	False	NA	-5	True	AATAAA	-18	NA	94544509	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94542113_94542311_94542526_94542936_94543852
ES.6029.11	chr11	-	2529	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	78.9567782999419	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4375	False	NA	-5	True	AATAAA	-18	NA	94544818	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ES.6029.12	chr11	-	2316	9	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.285875160712	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4407	False	NA	-5	True	AATAAA	-18	NA	94544786	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541172_94541850_94544521
ES.6029.13	chr11	-	2823	12	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	108.646290911957	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4653	False	NA	-5	True	AATAAA	-18	NA	94544540	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94542113_94542311_94542526_94542902_94544521
ES.6029.14	chr11	-	2602	9	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-17	0	intron_retention	FALSE	canonical	3	39	junction_7	83.0480847160246	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4386	False	NA	-5	True	AATAAA	-18	NA	94544807	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94541850_94544521
ES.6029.15	chr11	-	3265	7	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	28	-1	intron_retention	FALSE	canonical	3	52	junction_5	69.2180532006563	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAGCTTGGAGGAAGA	4431	False	NA	-6	True	AATAAA	-17	NA	94544762	94535822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538575_94538769_94538889_94538968_94539056_94540288_94541850_94544521
ES.6029.16	chr11	-	2442	8	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	-2	intron_retention	FALSE	canonical	3	178	junction_7	30.8954788317789	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	4624	False	NA	-7	True	AATAAA	-16	NA	94544569	94535823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94536832_94538116_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ES.6029.17	chr11	-	3765	8	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-53	-2	intron_retention	FALSE	canonical	3	39	junction_5	81.0693832341112	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	4643	False	NA	-7	True	AATAAA	-16	NA	94544550	94535823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ES.6029.18	chr11	-	2843	8	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-65	-2	intron_retention	FALSE	canonical	3	52	junction_6	68.2175391894286	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	4631	False	NA	-7	True	AATAAA	-16	NA	94544562	94535823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94541850_94544521
ES.6029.19	chr11	-	3999	8	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	-2	intron_retention	FALSE	canonical	3	178	junction_7	32.1818810728608	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGCTTGGAGGAAG	4624	False	NA	-7	True	AATAAA	-16	NA	94544569	94535823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94540965_94541048_94541850_94544521
ES.6029.2	chr11	-	4851	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-58	2585	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	78.9567782999419	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAACTTAAA	4638	False	NA	NA	False	NA	NA	NA	94544555	94533236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ES.6029.20	chr11	-	2498	9	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-74	-5	intron_retention	FALSE	canonical	3	39	junction_6	79.044291381478	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGAGCTTGGAGG	4622	False	NA	-10	True	AATAAA	-13	NA	94544571	94535826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ES.6029.22	chr11	-	3704	7	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-53	-6	intron_retention	FALSE	canonical	3	178	junction_6	32.1143789186921	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGTGGAGCTTGGAG	4643	False	NA	-11	True	AATAAA	-12	NA	94544550	94535827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ES.6029.3	chr11	-	4673	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-62	2585	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.4553637962182	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAACTTAAA	4634	False	NA	NA	False	NA	NA	NA	94544559	94533236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94534344_94534464_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541846_94544521
ES.6029.4	chr11	-	3087	13	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-72	2583	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	92.2553822579233	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAATAAATAAAACTTA	4624	False	NA	NA	False	NA	NA	NA	94544569	94533238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94534344_94534464_94534541_94535315_94535374_94536253_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
ES.6029.5	chr11	-	2475	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	-10	-21	-10	21	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGCGTGTAGTGATGC	4393	False	NA	16	True	AATAAA	-39	NA	94544800	94535800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ES.6029.6	chr11	-	4301	6	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-56	11	intron_retention	FALSE	canonical	3	178	junction_5	34.1725035664641	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGACTAAAGGAGCGT	4640	False	NA	6	True	AATAAA	-29	NA	94544553	94535810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94536832_94538116_94538575_94538769_94538889_94538968_94541850_94544521
ES.6029.7	chr11	-	4088	7	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-66	9	intron_retention	FALSE	canonical	3	178	junction_6	34.446415714201	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGAAGACTAAAGGAGC	4630	False	NA	4	True	AATAAA	-27	NA	94544563	94535812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94541850_94544521
ES.6029.8	chr11	-	4416	7	NIC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	36	9	intron_retention	FALSE	canonical	3	178	junction_6	31.2698825638274	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGAAGACTAAAGGAGC	4439	False	NA	4	True	AATAAA	-27	NA	94544754	94535812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94536432_94536641_94536832_94538116_94538575_94538769_94538889_94538968_94540965_94541048_94541850_94544521
ES.6029.9	chr11	-	2385	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	96.3627406095207	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4664	False	NA	-5	True	AATAAA	-18	NA	94544529	94535821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544376
ES.603.1	chr1	+	2498	3	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTAAGTCCTCTGTTT	4571	False	NA	NA	False	AATAAA	-14	NA	60891944	60897321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_60892073_60893829_60893860_60894981
ES.6030.1	chr11	-	2385	2	Antisense	novelGene_ENSMUSG00000024414.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAAGACACACGTATCT	NA	False	NA	NA	False	ATTAAA	-24	NA	94550652	94548223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_94548714_94548757
ES.6031.1	chr11	+	2472	6	Antisense	novelGene_ENSMUSG00000020868.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGACCCTAATACTGG	NA	False	NA	NA	False	NA	NA	NA	94558470	94562319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94558673_94558886_94559070_94559155_94559366_94559550_94559637_94560268_94560470_94560729
ES.6032.1	chr11	-	4931	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	26	-1515	26	1515	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTTGTTTTAATTTACC	2231	False	NA	NA	False	NA	NA	NA	94568315	94553161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.11	chr11	-	3374	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	41.5205972982085	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2285	False	NA	-6	True	AATATA	-16	NA	94568261	94554676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559138_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.12	chr11	-	3045	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.2847298577959	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2239	False	NA	-6	True	AATATA	-16	NA	94568307	94554676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561496_94561627_94568098
ES.6032.13	chr11	-	4000	9	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	112	junction_5	14.1592505098257	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2301	False	NA	-6	True	AATATA	-16	NA	94568245	94554676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.14	chr11	-	3735	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	41.4807184122937	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2304	False	NA	-6	True	AATATA	-16	NA	94568242	94554676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557183_94557357_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.16	chr11	-	6325	8	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-3687	-2	intron_retention	FALSE	canonical	0	0	junction_7	49.1220886347144	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCAATGTCCTTGTTTG	7841	False	NA	-8	True	AATATA	-14	NA	94562705	94554678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560909_94561133_94561665_94561733
ES.6032.18	chr11	-	3484	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	39.2021683073781	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCAATGTCCTTGTTTG	2247	False	NA	-8	True	AATATA	-14	NA	94568299	94554678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557838_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.19	chr11	-	8014	8	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	2582	-2	intron_retention	FALSE	canonical	3	112	junction_6	8.8109393972053	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCAATGTCCTTGTTTG	4895	False	NA	-8	True	AATATA	-14	NA	94565651	94554678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732
ES.6032.2	chr11	-	5472	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	49	1512	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGCTTTGTTTTAATTT	2254	False	NA	NA	False	NA	NA	NA	94568292	94553164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.20	chr11	-	3212	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.6456480319373	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCAATGTCCTTGTTT	2300	False	NA	-9	True	AATATA	-13	NA	94568246	94554679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559236_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.22	chr11	-	3553	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	112	junction_6	14.166557733786	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTCAATGTCCTTGTT	2304	False	NA	-10	True	AATATA	-12	NA	94568242	94554680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.23	chr11	-	2210	8	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-557	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	59.1652821530067	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTCAATGTCCTTGTT	NA	False	NA	-10	True	AATATA	-12	NA	94559575	94554680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557183_94557357_94557478_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552
ES.6032.24	chr11	-	4247	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-3729	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.3038739103247	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTCAATGTCCTTGTT	7799	False	NA	-10	True	AATATA	-12	NA	94562747	94554680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561665_94561733
ES.6032.25	chr11	-	3898	4	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-574	279	intron_retention	FALSE	canonical	3	129	junction_3	5.8878405775519	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGCAATAGGGCTCAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	94559592	94555133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94558121_94558409_94559064_94559150_94559368_94559552
ES.6032.26	chr11	-	2945	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	35	462	35	274	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACGATGTGCAATAGGGC	2240	False	NA	NA	False	ATTAAA	-16	NA	94568306	94555138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.3	chr11	-	3446	11	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	41	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	41.7664937479794	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	2354	False	NA	0	True	AATATA	-22	NA	94568192	94554670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557505_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.4	chr11	-	3437	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	11	-6	11	6	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	2216	False	NA	0	True	AATATA	-22	NA	94568330	94554670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.5	chr11	-	5986	10	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	3765	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	42.2929232617549	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	6078	False	NA	0	True	AATATA	-22	NA	94564468	94554670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94557358_94557924_94558060_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133
ES.6032.6	chr11	-	4634	10	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-3539	6	intron_retention	FALSE	canonical	0	0	junction_9	43.5379783126819	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	7989	False	NA	0	True	AATATA	-22	NA	94562557	94554670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561665_94561733
ES.6032.7	chr11	-	4120	9	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-9	6	intron_retention	FALSE	canonical	0	0	junction_3	46.2945731160792	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTGTTTGCTTCCTGC	2298	False	NA	0	True	AATATA	-22	NA	94568248	94554670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94558121_94558409_94559048_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.8	chr11	-	4021	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	-8	4	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCCTTGTTTGCTTCCT	2197	False	NA	-2	True	AATATA	-20	NA	94568349	94554672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6032.9	chr11	-	3922	10	NNC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	26	0	intron_retention	FALSE	canonical	1	1	junction_2	42.9377959493458	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2231	False	NA	-6	True	AATATA	-16	NA	94568315	94554676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94555736_94557023_94558060_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ES.6033.1	chr11	-	177	1	Intergenic	novelGene_4856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAGATGAATTA	NA	False	NA	NA	False	NA	NA	NA	94571108	94570931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94570900_94571100
ES.6034.1	chr11	-	230	1	Intergenic	novelGene_4857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTATGAAGCTGTATG	NA	False	NA	NA	False	GATAAA	-43	NA	94572086	94571856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94571900_94572100
ES.6035.1	chr11	-	2487	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3212	1841	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGTGTGTTTCTCT	2131	False	NA	NA	False	AATAAA	-21	NA	94651801	94645960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
ES.6035.2	chr11	-	2479	4	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3212	1841	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.0332779621949	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGTGTGTTTCTCT	2131	False	NA	NA	False	AATAAA	-21	NA	94651801	94645960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94651641
ES.6035.3	chr11	-	2614	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3420	1841	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	7.58287544405155	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGTGTGTGTTTCTCT	1923	False	NA	NA	False	AATAAA	-21	NA	94652009	94645960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94647982_94648187_94648306_94648522_94648622_94649100_94649124_94651656
ES.6035.4	chr11	-	2608	4	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3441	1837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.33999733546454	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAAATGTGTGTGTGTTT	1902	False	NA	NA	False	AATAAA	-17	NA	94652030	94645964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94647982_94648187_94648306_94648522_94648622_94651656
ES.6036.1	chr11	-	759	4	NNC	ENSMUSG00000083227.2	novel	354	3	NA	NA	-4275	-179	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCTGGTTGTTTTGAAA	NA	False	NA	-1	True	AATAAA	-17	NA	94692878	94688053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94688355_94688551_94688636_94689121_94689145_94692527
ES.6037.1	chr11	-	1349	5	NNC	ENSMUSG00000081007.2	novel	370	3	NA	NA	-3072	513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATCCTGTTCTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	94722828	94718498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94719193_94719372_94719572_94719710_94719795_94720273_94720297_94722479
ES.6037.2	chr11	-	1462	6	NNC	ENSMUSG00000081007.2	novel	370	3	NA	NA	-3072	506	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.09544511501033	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTCTGGATCCTGT	NA	False	NA	NA	False	AATAAA	-8	NA	94722828	94718505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94719193_94719372_94719572_94719710_94719795_94720034_94720155_94720273_94720297_94722479
ES.6038.1	chr11	+	192	1	Intergenic	novelGene_4858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAGAAAGAAAGA	7522	False	NA	NA	False	NA	NA	NA	94749652	94749844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94749700_94749800
ES.6039.1	chr11	+	188	1	Intergenic	novelGene_4859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGGCCTTATTGGA	NA	False	NA	NA	False	NA	NA	NA	94790053	94790241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94790100_94790200
ES.604.1	chr1	-	189	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTCATCCTTTCTTTT	8497	False	NA	NA	False	NA	NA	NA	60894039	60893850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_60893800_60894000
ES.6040.1	chr11	+	171	1	Intergenic	novelGene_4860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGCCGG	NA	False	NA	NA	False	NA	NA	NA	94799485	94799656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94799500_94799700
ES.6041.1	chr11	+	2483	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13783	2	4639	-2	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGTGCAGTGGCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	94840832	94843866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ES.6041.2	chr11	+	1282	5	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	13791	1195	4647	-1195	3prime_fragment	FALSE	canonical	2	4	junction_1	14.6180539060437	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94840840	94842673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ES.6041.3	chr11	+	1821	2	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14867	2	5723	-2	3prime_fragment	FALSE	canonical	3	39	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGTGCAGTGGCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	94841916	94843866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94842170_94842298
ES.6041.4	chr11	+	627	2	ISM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	14868	1195	5724	-1195	3prime_fragment	FALSE	canonical	3	39	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94841917	94842673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94842170_94842298
ES.6042.1	chr11	+	1761	1	FSM	ENSMUSG00002075548.1	ENSMUST00020182642.1	116	1	-756	-889	-756	889	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	94848847	94850608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94848800_94850600
ES.6043.1	chr11	+	177	1	Intergenic	novelGene_4861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	94860782	94860959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94860800_94861000
ES.6044.1	chr11	+	4630	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	-118	-4	-118	4	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTGGTTTCTTGATGCG	NA	False	NA	24	True	CATAAA	-20	NA	94881742	94897729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.3	chr11	+	4222	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	7	279	7	-279	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGCCCGTCTCTTCC	NA	False	NA	8	True	AATAGA	-18	NA	94881867	94897446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.5	chr11	+	2391	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	1062	1055	-783	-1055	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCCTCCTGCTTGGA	NA	False	NA	NA	False	NA	NA	NA	94882922	94896670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.6	chr11	+	4883	9	FSM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	-1792	4	1392	-4	multi-exon	FALSE	canonical	3	26	junction_1	8.14612638006556	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCGTCGCCTGGTTTC	NA	False	NA	16	True	CATAAA	-12	NA	94885097	94897721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.7	chr11	+	3049	8	ISM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	1368	4	1368	-4	3prime_fragment	FALSE	canonical	3	44	junction_1	3.36852174930046	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTCGTCGCCTGGTTTC	NA	False	NA	16	True	CATAAA	-12	NA	94888257	94897721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.8	chr11	+	1973	4	ISM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	6013	5	6013	-5	3prime_fragment	FALSE	canonical	3	45	junction_2	2.94392028877595	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCGTCGCCTGGTTT	NA	False	NA	15	True	CATAAA	-11	NA	94892902	94897720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_94892959_94895386_94895617_94895846_94895944_94896130
ES.6044.9	chr11	+	1597	1	NIC	ENSMUSG00000038976.13	novel	4508	10	NA	NA	9239	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	False	NA	20	True	CATAAA	-16	NA	94896128	94897725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_94896100_94897700
ES.6045.1	chr11	-	157	1	Intergenic	novelGene_4862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	94915087	94914930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94914900_94915100
ES.6046.1	chr11	-	2287	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	-42	1	-42	-1	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGGCTTCCTTG	6032	False	NA	-2	True	NA	NA	NA	94932222	94917084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ES.6046.2	chr11	-	2142	10	NIC	ENSMUSG00000038967.14	novel	2246	11	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	12.0185042515466	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGGCTTCCTTG	6063	False	NA	-2	True	NA	NA	NA	94932191	94917084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94918149_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ES.6046.3	chr11	-	1712	5	NNC	ENSMUSG00000038967.14	novel	2246	11	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.5267652463311	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCCTGGCTTCCTTG	6054	False	NA	-2	True	NA	NA	NA	94932200	94917084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94918162_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ES.6046.4	chr11	-	1231	9	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	11	2046	11	424	5prime_fragment	FALSE	canonical	3	33	junction_3	6.2236946422523	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATCTGTTTAGCTGTCA	6085	False	NA	NA	False	NA	NA	NA	94932169	94919129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ES.6047.1	chr11	+	199	1	Intergenic	novelGene_4863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGGAAAATTTAAAGAAAA	262	False	NA	NA	False	NA	NA	NA	94946079	94946278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_94946100_94946300
ES.6048.1	chr11	+	1725	11	Antisense	novelGene_ENSMUSG00000001507.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAAAAACACCCCTAC	261	False	NA	NA	False	AAAACA	-39	NA	94946574	94953102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_94946598_94946680_94946763_94947266_94947339_94947529_94948006_94948094_94948246_94948791_94948932_94949038_94949111_94950152_94950236_94950380_94950519_94950604_94950694_94952703
ES.6049.1	chr11	-	4321	26	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	13.9057398221022	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	8775	False	NA	0	True	AATAAA	-22	NA	94967637	94935299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94967593
ES.6049.10	chr11	-	3519	12	NIC	ENSMUSG00000001507.17	novel	4636	25	NA	NA	-958	-2	intron_retention	FALSE	canonical	3	46	junction_6	6.3571395407444	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	3716	False	NA	-2	True	AATAAA	-20	NA	94947979	94935301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909
ES.6049.11	chr11	-	4805	27	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	17.9447294103162	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTGCTGTGTCTGCTCCT	8775	False	NA	-4	True	AATAAA	-18	NA	94967637	94935303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953431_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967498_94967593
ES.6049.12	chr11	-	4980	26	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-5	intron_retention	FALSE	canonical	0	0	junction_13	14.2379773844461	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGCTGTGTCTGCTCC	8775	False	NA	-5	True	AATAAA	-17	NA	94967637	94935304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948035_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.13	chr11	-	4884	25	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_15	14.5287072147983	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGCTGTGTCTGCTCC	8776	False	NA	-5	True	AATAAA	-17	NA	94967636	94935304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.14	chr11	-	5309	25	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	25	-5	intron_retention	FALSE	canonical	3	46	junction_7	6.65780661245796	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGCTGTGTCTGCTCC	8897	False	NA	-5	True	AATAAA	-17	NA	94967515	94935304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.15	chr11	-	4139	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	21	701	21	-701	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGCTCAGCTGCAATTC	8893	False	NA	NA	False	AATAAA	-22	NA	94967519	94936000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.2	chr11	-	4957	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	-97	1	-10	-1	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	-1	True	AATAAA	-21	NA	94967637	94935300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.3	chr11	-	4861	27	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	14.1509194298483	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	-1	True	AATAAA	-21	NA	94967637	94935300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967498_94967593
ES.6049.4	chr11	-	5541	26	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_1	14.4131051477466	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTGCTCCTACC	8775	False	NA	-1	True	AATAAA	-21	NA	94967637	94935300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94936690_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.5	chr11	-	5286	25	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	46	junction_6	7.26566793595438	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	8775	False	NA	-2	True	AATAAA	-20	NA	94967637	94935301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.6	chr11	-	4928	26	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	1	junction_1	14.2422470137265	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	8775	False	NA	-2	True	AATAAA	-20	NA	94967637	94935301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94937302_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ES.6049.8	chr11	-	4868	27	NNC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	14.1509194298483	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	8775	False	NA	-2	True	AATAAA	-20	NA	94967637	94935301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967498_94967585
ES.6049.9	chr11	-	4847	27	NIC	ENSMUSG00000001507.17	novel	4861	26	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	14.1509194298483	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	8775	False	NA	-2	True	AATAAA	-20	NA	94967637	94935301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967485_94967593
ES.605.1	chr1	+	3385	4	Genic_Genomic	ENSMUSG00000102549.2	novel	1401	1	NA	NA	-20730	1435	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGGTCTATAGGTGAATT	5223	False	NA	NA	False	NA	NA	NA	60898766	60922332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_60898879_60907665_60907782_60912402_60912548_60919320
ES.6050.1	chr11	-	5365	2	Intergenic	novelGene_4864	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATACTTTTAAAGGGGT	NA	False	NA	NA	False	AATAAA	-1	NA	94992705	94986971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_94992273_94992641
ES.6051.1	chr11	+	176	1	Intergenic	novelGene_4865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTAACAATA	3592	False	NA	NA	False	NA	NA	NA	95001503	95001679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95001500_95001700
ES.6052.1	chr11	-	175	1	Intergenic	novelGene_4866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAAAAATCAC	8336	False	NA	NA	False	NA	NA	NA	95001973	95001798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95001800_95002000
ES.6053.1	chr11	+	2604	3	FSM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCACAGTACTCTTTGAA	467	False	NA	NA	False	NA	NA	NA	95010944	95016119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95011473_95012533_95012725_95014234
ES.6054.1	chr11	+	232	1	Intergenic	novelGene_4867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGTCTTTGTTTTCTAA	NA	False	NA	NA	False	NA	NA	NA	95143677	95143909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95143700_95143900
ES.6055.1	chr11	+	179	2	Intergenic	novelGene_4868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGCCGG	NA	False	NA	NA	False	NA	NA	NA	95176148	95214317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95176208_95214197
ES.6055.10	chr11	+	2108	8	Fusion	ENSMUSG00000038893.13_ENSMUSG00000085143.2	novel	400	2	NA	NA	-11	-1	multi-exon	FALSE	canonical	0	0	junction_1	21.4637805978122	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGGTTTTCTGAATAC	NA	False	NA	12	True	AATAAA	-14	NA	95201243	95272697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_95201280_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
ES.6055.11	chr11	+	325	1	Intergenic	novelGene_4873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95214142	95214467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95214100_95214500
ES.6055.12	chr11	+	171	1	Intergenic	novelGene_4874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTATTTGTGT	NA	False	NA	NA	False	NA	NA	NA	95221867	95222038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95221900_95222000
ES.6055.13	chr11	+	2362	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	-46	1	-46	-1	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGGTTTTCTGAATAC	NA	False	NA	12	True	AATAAA	-14	NA	95227797	95272697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
ES.6055.14	chr11	+	4009	7	ISM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	0	0	0	0	intron_retention	FALSE	canonical	3	42	junction_6	8.11890797254573	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227843	95272698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644
ES.6055.15	chr11	+	2238	8	NIC	ENSMUSG00000038893.13	novel	400	2	NA	NA	15724	-4	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	20.1615920978073	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTGGGTTTTCTGAA	NA	False	NA	9	True	AATAAA	-11	NA	95246511	95272694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95246681_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
ES.6055.16	chr11	+	200	1	Intergenic	novelGene_4875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACAACCGTTGGGGTGA	NA	False	NA	NA	False	AAAAAG	-5	NA	95273455	95273655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95273500_95273700
ES.6055.2	chr11	+	175	2	Antisense	novelGene_ENSMUSG00000038909.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	95176150	95179121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95176261_95179056
ES.6055.3	chr11	+	206	2	Antisense	novelGene_ENSMUSG00000101258.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACAACCGTTGGGGTGA	NA	False	NA	NA	False	AAAAAG	-5	NA	95176150	95273655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95176297_95273595
ES.6055.4	chr11	+	177	2	Antisense	novelGene_ENSMUSG00000038909.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	95176150	95187129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95176221_95187022
ES.6055.5	chr11	+	173	1	Intergenic	novelGene_4869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGCAAAAT	NA	False	NA	NA	False	NA	NA	NA	95178948	95179121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95178900_95179100
ES.6055.6	chr11	+	177	1	Intergenic	novelGene_4870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGGC	NA	False	NA	NA	False	NA	NA	NA	95186952	95187129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95187000_95187100
ES.6055.7	chr11	+	824	3	NNC	ENSMUSG00000085143.2	novel	630	3	NA	NA	-103	91	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGCTGTTACGGAGC	NA	False	NA	NA	False	AATAAA	-7	NA	95201151	95215413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95201280_95210002_95210276_95214990
ES.6055.8	chr11	+	2613	1	Genic_Genomic	ENSMUSG00000085143.2	novel	NA	NA	NA	NA	-86	-11541	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGGACAGAAGGATCCA	NA	False	NA	NA	False	NA	NA	NA	95201168	95203781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95201200_95203800
ES.6055.9	chr11	+	1454	1	Genic_Genomic	ENSMUSG00000085143.2	novel	NA	NA	NA	NA	-44	-12658	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGCTCAGATATTTTC	NA	False	NA	NA	False	CATAAA	-11	NA	95201210	95202664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95201200_95202700
ES.6056.1	chr11	-	5800	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-3	2401	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTCTGTGTCACGAGT	NA	False	NA	NA	False	AATAAA	-30	NA	95201018	95162683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.10	chr11	-	3563	16	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	343.790026356528	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201031	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95192857_95192954_95193958_95194136_95196874_95196971_95200860
ES.6056.11	chr11	-	3400	14	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_13	269.159529036231	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201054	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.12	chr11	-	3405	14	NNC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	244.459384218615	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201029	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180670_95185383_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.13	chr11	-	3480	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	312.011814598389	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201016	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167294_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197025_95200860
ES.6056.14	chr11	-	5994	12	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1	0	intron_retention	FALSE	canonical	3	566	junction_7	138.265943291832	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201016	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95168442_95171216_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.15	chr11	-	4627	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1174	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95202246	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.16	chr11	-	3543	15	NIC	ENSMUSG00000038909.17	novel	3414	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	239.90427512758	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95200398	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200203
ES.6056.17	chr11	-	3268	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_12	324.350205111012	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201029	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.19	chr11	-	3249	13	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	303.98802973509	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201016	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95200860
ES.6056.2	chr11	-	5843	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	28	-2401	-10	2401	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTCTGTGTCACGAGT	NA	False	NA	NA	False	AATAAA	-30	NA	95201044	95162683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.20	chr11	-	5456	13	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1	0	intron_retention	FALSE	canonical	1	7	junction_12	246.669636806442	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201016	95165084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95200860
ES.6056.24	chr11	-	2390	8	NNC	ENSMUSG00000038909.17	novel	3248	13	NA	NA	-4546	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	318.939953404322	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95177266	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168373_95171267_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155
ES.6056.26	chr11	-	3280	14	NIC	ENSMUSG00000038909.17	novel	3414	15	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	300.377750340148	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95200402	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ES.6056.27	chr11	-	4444	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	281	junction_8	179.750965845033	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95201031	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.28	chr11	-	3420	14	FSM	ENSMUSG00000038909.17	ENSMUST00000072621.12	3324	14	-97	1	-97	-1	multi-exon	FALSE	canonical	0	0	junction_13	277.302283100983	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95200525	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ES.6056.29	chr11	-	3396	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.161595116603	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95201061	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95165864_95165925_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.3	chr11	-	5955	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	3	-2398	3	2398	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTTCCTCTGTGTCACG	NA	False	NA	NA	False	AATAAA	-27	NA	95201069	95162686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.30	chr11	-	4060	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	566	junction_9	135.183985956812	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95201018	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.31	chr11	-	2560	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	268.763466677315	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95201031	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95165646_95166513_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.32	chr11	-	4293	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	40	junction_12	279.978669822463	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95201029	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.35	chr11	-	3649	15	NNC	ENSMUSG00000038909.17	novel	3414	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	328.444105765722	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	False	NA	-6	True	AATAAA	-16	NA	95200398	95165085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95198385_95198583_95200203
ES.6056.36	chr11	-	3369	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	1	7	junction_13	247.717939428683	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201032	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95200860
ES.6056.37	chr11	-	4465	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	40	junction_13	239.391338643969	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201016	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.38	chr11	-	3515	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	245.342544793426	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201029	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197006_95200842
ES.6056.39	chr11	-	3508	15	FSM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	-97	3	-97	-3	multi-exon	FALSE	canonical	0	0	junction_14	245.342544793426	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95200525	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ES.6056.4	chr11	-	4680	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	41	-1161	3	1161	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGTGCAGCCTGGTCT	NA	False	NA	NA	False	AATGAA	-26	NA	95201031	95163923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.40	chr11	-	3498	15	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	7	-3	combination_of_known_splicesites	FALSE	canonical	3	40	junction_14	236.665407920385	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201065	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.42	chr11	-	3505	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	242.571049974465	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95200999	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194157_95196874_95197023_95200860
ES.6056.44	chr11	-	5644	14	NIC	ENSMUSG00000038909.17	novel	3414	15	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	25	junction_13	239.619619668711	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95200402	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200203
ES.6056.45	chr11	-	3426	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.751574828657	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201019	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167294_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.46	chr11	-	5028	13	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	-3	intron_retention	FALSE	canonical	3	566	junction_8	137.221738640623	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201069	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.47	chr11	-	3510	15	NNC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.088884931858	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201031	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172670_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.49	chr11	-	3375	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	241.211243322788	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201031	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.50	chr11	-	3358	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	40	junction_13	293.252804079674	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95201032	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95196971_95200860
ES.6056.51	chr11	-	3378	15	NNC	ENSMUSG00000038909.17	novel	3414	15	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	312.011814598389	770	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95200421	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95166714_95167294_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ES.6056.53	chr11	-	3876	5	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	26200	3	-1508	-3	intron_retention	FALSE	canonical	3	712	junction_2	85.4206503136098	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTGACTGCTCTGAA	NA	False	NA	-8	True	AATAAA	-14	NA	95174228	95165087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326
ES.6056.56	chr11	-	2332	8	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	3489	8495	3400	-852	internal_fragment	FALSE	canonical	3	566	junction_4	132.813356839973	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGAAATTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	95196939	95173579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874
ES.6056.6	chr11	-	3474	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	2	-6	2	6	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCTGAAGCTTGTTTA	NA	False	NA	1	True	AATAAA	-23	NA	95201070	95165078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.7	chr11	-	3365	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	258.98824244012	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTCTGAAGCTTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	95201070	95165080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.8	chr11	-	3566	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	-2	-4	-2	4	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTCTGAAGCTTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	95201074	95165080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ES.6056.9	chr11	-	3319	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	281.52278129645	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGCTCTGAAGCTT	NA	False	NA	-4	True	AATAAA	-18	NA	95201068	95165083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95200860
ES.6057.1	chr11	-	178	1	Intergenic	novelGene_4871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCCATCCA	NA	False	NA	NA	False	NA	NA	NA	95203398	95203220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95203200_95203400
ES.6058.1	chr11	-	5732	2	Antisense	novelGene_ENSMUSG00000085143.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGAGCCATAGGAGCAA	NA	False	NA	NA	False	NA	NA	NA	95213538	95207737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_95208784_95208852
ES.6058.2	chr11	-	3219	1	Intergenic	novelGene_4872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTAGGCTATGTACTGC	NA	False	NA	NA	False	NA	NA	NA	95213536	95210317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95210300_95213500
ES.6059.1	chr11	+	141	1	Intergenic	novelGene_4876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95274599	95274740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95274600_95274700
ES.606.1	chr1	+	301	1	FSM	ENSMUSG00000081382.2	ENSMUST00000121555.2	525	1	295	-71	295	71	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGAGCATGGCAGCATC	NA	False	NA	NA	False	AATAAA	-44	NA	60940351	60940652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_60940400_60940700
ES.6060.1	chr11	+	1579	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	-57	1	-57	-1	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGAGACCCTGCTGCTG	NA	False	NA	20	True	AATAAA	-21	NA	95275460	95282601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.10	chr11	+	1145	9	NNC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	11	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	109.485158811594	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGGAAGCAAGATGGAA	NA	False	NA	-86	True	NA	NA	NA	95275742	95282495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281484_95282313
ES.6060.11	chr11	+	3530	6	NIC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	21	-7	intron_retention	FALSE	canonical	3	66	junction_2	89.780621517118	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTGCGAGACCCTG	NA	False	NA	14	True	AATAAA	-15	NA	95275752	95282595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95276731_95277336_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.12	chr11	+	4940	4	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	24	-9	intron_retention	FALSE	canonical	3	284	junction_3	6.16441400296898	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAAGTGCGAGACCC	NA	False	NA	12	True	AATAAA	-13	NA	95275755	95282593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95280033_95281103_95281211_95281350
ES.6060.2	chr11	+	1537	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	-240	2	-41	-2	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGAGACCCTGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	95275476	95282600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.3	chr11	+	3045	6	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	274	junction_2	8.56504524214554	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGAGACCCTGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	95275696	95282600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.4	chr11	+	3668	6	NIC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	66	junction_2	85.9804628971024	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCGAGACCCTGCTGCT	NA	False	NA	19	True	AATAAA	-20	NA	95275708	95282600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95281505_95282313
ES.6060.5	chr11	+	3184	6	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	260	junction_1	12.8747815515449	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGCGAGACCCTGCTGC	NA	False	NA	18	True	AATAAA	-19	NA	95275715	95282599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.6	chr11	+	2481	7	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	260	junction_2	12.684198393627	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGCGAGACCCTGCTG	NA	False	NA	17	True	AATAAA	-18	NA	95275730	95282598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.7	chr11	+	1305	9	NNC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	91.4972677187685	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAAGTGCGAGACCC	NA	False	NA	12	True	AATAAA	-13	NA	95275739	95282593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95275940_95276626_95276731_95277311_95277456_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6060.8	chr11	+	4432	5	NIC	ENSMUSG00000020873.16	novel	1523	9	NA	NA	8	-5	intron_retention	FALSE	canonical	3	260	junction_2	14.8492424049175	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGCGAGACCCTGCT	NA	False	NA	16	True	AATAAA	-17	NA	95275739	95282597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95275940_95276626_95278068_95278595_95280033_95281103_95281211_95281350
ES.6060.9	chr11	+	1699	9	NNC	ENSMUSG00000020873.16	novel	1299	9	NA	NA	11	413	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	108.521815203212	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGCTTTCCCCGACT	NA	False	NA	NA	False	NA	NA	NA	95275742	95283015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95275940_95276626_95276731_95277336_95277456_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ES.6061.1	chr11	-	1918	1	Antisense	novelGene_ENSMUSG00000020873.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGACAGCTGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	95278284	95276366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_95276400_95278300
ES.6062.1	chr11	+	2127	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-43	797	-43	-797	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGTGGAAAATGGAT	NA	False	NA	NA	False	GATAAA	-20	NA	95304862	95383435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.10	chr11	+	4960	10	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-797	intron_retention	FALSE	canonical	3	59	junction_1	68.2967381684107	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGTGGAAAATGGAT	NA	False	NA	NA	False	GATAAA	-20	NA	95304915	95383435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.11	chr11	+	1964	10	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-795	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	106.449895476292	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTGGAAAATGGATTT	NA	False	NA	NA	False	GATAAA	-22	NA	95304915	95383437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.12	chr11	+	2688	10	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	100.005555401243	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGGTCCTGTCATTG	NA	False	NA	NA	False	AATAAA	-15	NA	95304915	95384227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.13	chr11	+	5366	10	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-5	-391	intron_retention	FALSE	canonical	3	59	junction_1	68.2967381684107	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTATCTCTGGTCTT	NA	False	NA	6	True	TATAAA	-18	NA	95304915	95383841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.14	chr11	+	8946	9	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	0	-3	intron_retention	FALSE	canonical	3	59	junction_1	72.0503296314458	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95304923	95384229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95365209_95365310_95365439_95372739_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.17	chr11	+	2252	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	14	797	14	-797	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGTGGAAAATGGAT	NA	False	NA	NA	False	GATAAA	-20	NA	95304937	95383435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.18	chr11	+	2466	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	14	-393	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304937	95383839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.19	chr11	+	4892	9	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	14	-470	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	82.8378498936326	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95304937	95380671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662
ES.6062.2	chr11	+	2458	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	-29	-387	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	99.4897482155825	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTATCTCTGGTCTTTTGT	NA	False	NA	10	True	TATAAA	-22	NA	95304876	95383845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.20	chr11	+	5537	9	NIC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	16	-396	intron_retention	FALSE	canonical	3	238	junction_6	18.1654720555234	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTGTGTGGTATCTCTG	NA	False	NA	1	True	TATAAA	-13	NA	95304939	95383836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95305231_95361347_95361492_95362048_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.21	chr11	+	2482	13	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	22	5019	intron_retention	TRUE	canonical	0	0	junction_10	116.133902600978	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGCTTCTGTTTACTA	NA	False	NA	NA	False	TTTAAA	-6	NA	95304945	95389251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522_95382739_95385158_95385246_95386386_95386576_95388592
ES.6062.23	chr11	+	2636	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	29	-395	intron_retention	FALSE	canonical	0	0	junction_1	84.8829259104039	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTGGTATCTCTGG	NA	False	NA	2	True	TATAAA	-14	NA	95304952	95383837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305235_95361354_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.24	chr11	+	2538	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	37	-393	intron_retention	FALSE	non_canonical	0	0	junction_2	83.5979502377338	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304960	95383839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305231_95361347_95361492_95362143_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.25	chr11	+	2485	10	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	37	-393	intron_retention	FALSE	canonical	0	0	junction_5	85.736028988207	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304960	95383839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365330_95372778_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.26	chr11	+	2573	11	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	37	-394	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	82.0241427873526	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGGTATCTCTGGT	NA	False	NA	3	True	TATAAA	-15	NA	95304960	95383838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95304994_95305052_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.27	chr11	+	2497	11	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	47	-395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	103.991778521189	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTGGTATCTCTGG	NA	False	NA	2	True	TATAAA	-14	NA	95304970	95383837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522_95383680_95383728
ES.6062.28	chr11	+	2504	9	NNC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	51	-394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	88.6548786023646	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGGTATCTCTGGT	NA	False	NA	3	True	TATAAA	-15	NA	95304974	95383838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95305231_95361347_95361492_95365048_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.29	chr11	+	2752	10	NIC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	88	-3	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	78.3794190673377	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTCCTGTCATTGAT	NA	False	NA	NA	False	AATAAA	-17	NA	95305156	95384229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.3	chr11	+	2517	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-29	393	-29	-393	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGGTATCTCTGGTC	NA	False	NA	4	True	TATAAA	-16	NA	95304876	95383839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.30	chr11	+	3076	1	Intergenic	novelGene_4877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTACTCAGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	95308814	95311890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95308800_95311900
ES.6062.31	chr11	+	177	1	Intergenic	novelGene_4879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	95330719	95330896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95330700_95330900
ES.6062.32	chr11	+	3334	2	ISM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	74312	394	14091	-394	3prime_fragment	FALSE	canonical	3	280	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGGTATCTCTGGT	1635	False	NA	3	True	TATAAA	-15	NA	95379235	95383838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95381254_95382522
ES.6062.4	chr11	+	2896	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	-17	2	-17	-2	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCCTGTCATTGATG	NA	False	NA	NA	False	AATAAA	-18	NA	95304888	95384230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.6	chr11	+	2703	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	-23	383	-5	-383	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCTTTTGTTTCA	NA	False	NA	14	True	TATAAA	-26	NA	95304900	95383849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.7	chr11	+	2627	1	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	7	-57601	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACCAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	95304912	95307539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95304900_95307500
ES.6062.8	chr11	+	3083	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	-11	-9	7	9	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGATGTATTTCTGGAA	NA	False	NA	NA	False	AATAAA	-29	NA	95304912	95384241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6062.9	chr11	+	2601	10	NIC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	-5	-395	intron_retention	FALSE	canonical	3	26	junction_3	78.3794190673377	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTGGTATCTCTGG	NA	False	NA	2	True	TATAAA	-14	NA	95304915	95383837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ES.6063.1	chr11	-	199	1	Intergenic	novelGene_4878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAACAAGATCTCATG	NA	False	NA	NA	False	NA	NA	NA	95318974	95318775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95318800_95319000
ES.6064.1	chr11	-	1875	2	FSM	ENSMUSG00000046719.8	ENSMUST00000058866.8	2099	2	216	8	216	-8	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTATTCTATTCTAAG	NA	False	NA	-7	True	AATAAA	-12	NA	95405180	95400678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95402359_95404985
ES.6065.1	chr11	-	163	1	Intergenic	novelGene_4880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	95437349	95437186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95437200_95437300
ES.6066.1	chr11	+	1253	2	Antisense	novelGene_ENSMUSG00000000120.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTGTGCCTGAGTTGT	NA	False	NA	NA	False	AATATA	-41	NA	95467354	95469550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95468015_95468957
ES.6067.1	chr11	-	3481	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	-30	-5	-30	5	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGCCAAGAGAATTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	95478591	95459638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ES.6067.2	chr11	-	3525	7	NNC	ENSMUSG00000000120.7	novel	3446	6	NA	NA	38	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.4452060847692	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGCCAAGAGAATTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	95478523	95459638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95476217_95476330_95478309
ES.6067.5	chr11	-	3275	7	NNC	ENSMUSG00000000120.7	novel	3446	6	NA	NA	33	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.1462090662152	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGCCAAGAGAATTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	95478528	95459638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95461405_95461547_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ES.6067.6	chr11	-	3380	6	NNC	ENSMUSG00000000120.7	novel	3446	6	NA	NA	37	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7513477944948	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAACGATG	NA	False	NA	NA	False	ATTAAA	-5	NA	95478524	95459653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95461911_95462653_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ES.6067.8	chr11	-	9141	4	NIC	ENSMUSG00000000120.7	novel	3446	6	NA	NA	35	-10	intron_retention	FALSE	canonical	3	68	junction_3	4.54606056566195	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAAACGATG	NA	False	NA	NA	False	ATTAAA	-5	NA	95478526	95459653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95461922_95462645_95469160_95471778_95471921_95478309
ES.6067.9	chr11	-	1905	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	35	1506	35	-1506	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCAGGTTTGGAGCCC	NA	False	NA	NA	False	NA	NA	NA	95478526	95461149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ES.6068.1	chr11	-	1075	3	Intergenic	novelGene_4881	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGCTGAAAATCTGT	NA	False	NA	NA	False	ATTAAA	-5	NA	95491248	95486941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95487794_95489451_95489527_95491100
ES.6069.1	chr11	+	176	1	Intergenic	novelGene_4882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGAGCGAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	95500472	95500648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95500500_95500600
ES.607.1	chr1	+	170	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAAAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	61414551	61414721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_61414600_61414700
ES.6070.1	chr11	+	1832	4	NNC	ENSMUSG00000084856.2	novel	914	3	NA	NA	-570	12455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.63299316185545	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCACATGGCCTGAG	NA	False	NA	NA	False	AATAAA	-15	NA	95512915	95533117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95512962_95513349_95513605_95515353_95515531_95531763
ES.6071.1	chr11	-	184	1	Intergenic	novelGene_4883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	95540857	95540673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95540700_95540900
ES.6072.1	chr11	+	206	1	Intergenic	novelGene_4884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAGAGAAAATGATCTC	NA	False	NA	NA	False	NA	NA	NA	95546498	95546704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95546500_95546700
ES.6073.1	chr11	+	191	1	Intergenic	novelGene_4885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTTGTTTTCTGTATA	NA	False	NA	NA	False	AATAAA	-16	NA	95554866	95555057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95554900_95555100
ES.6074.1	chr11	+	1229	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	-156	726	-156	339	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTATTGTTACACTT	NA	False	NA	19	True	AATAAA	-35	NA	95557626	95570873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.11	chr11	+	1115	8	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	326	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	2575.49587062217	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATCAAGCGAAGCTTT	NA	False	NA	6	True	AATAAA	-22	NA	95557835	95570860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95560702_95560811_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.12	chr11	+	3371	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	326	intron_retention	FALSE	canonical	3	4384	junction_3	763.782796349852	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATCAAGCGAAGCTTT	NA	False	NA	6	True	AATAAA	-22	NA	95557835	95570860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95568973_95570519
ES.6074.13	chr11	+	1157	8	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2583.10369398473	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557835	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95559853_95560003_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.14	chr11	+	4109	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	4384	junction_3	763.782796349852	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557836	95571599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95568973_95570519
ES.6074.15	chr11	+	998	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	1	327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2157.58865531768	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557836	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568964_95570519
ES.6074.16	chr11	+	3330	6	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	1	327	intron_retention	FALSE	non_canonical	0	0	junction_3	2342.23804084897	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557836	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95566008_95566111_95566395_95568973_95570519
ES.6074.17	chr11	+	998	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	1	327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2157.58865531768	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557836	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570528
ES.6074.19	chr11	+	3470	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	1	318	intron_retention	FALSE	canonical	3	17	junction_2	2573.20304074297	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATCTCTAATTATCAAGC	NA	False	NA	-2	True	AATAAA	-14	NA	95557836	95570852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558978_95560702_95560811_95562212_95562375_95565967_95566111_95566395_95568973_95570519
ES.6074.20	chr11	+	1628	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	2391.12487335982	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGGTGTGTTTTCAAT	NA	False	NA	10	True	AATAAA	-24	NA	95557837	95571598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95557869_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.21	chr11	+	847	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	3	331	combination_of_known_splicesites	FALSE	canonical	2	123	junction_2	2345.78882254989	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCGAAGCTTTTATTG	NA	False	NA	11	True	AATAAA	-27	NA	95557838	95570865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95557869_95558862_95558978_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.22	chr11	+	1849	8	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2888.90935567493	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCGGGGTGTGTTTTCA	NA	False	NA	8	True	AATAAA	-22	NA	95557839	95571596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557871_95558862_95558978_95560702_95560811_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.24	chr11	+	2251	2	FSM	ENSMUSG00000038845.12	ENSMUST00000127031.2	610	2	4	-1645	4	-1384	multi-exon	FALSE	canonical	3	4618	junction_1	0	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAAGCCAGGCGGTGA	NA	False	NA	NA	False	NA	NA	NA	95557839	95561084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95557869_95558862
ES.6074.25	chr11	+	1010	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	4	327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2244.88740747108	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557839	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557875_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.27	chr11	+	1726	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2186.67299922864	757	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTCGGGGTGTGTTTTC	NA	False	NA	7	True	AATAAA	-21	NA	95557843	95571595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557869_95558862_95558970_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.29	chr11	+	4548	6	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	20	-1	intron_retention	FALSE	canonical	2	203	junction_1	2264.81817371726	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGGTGTGTTTTCAAT	NA	False	NA	10	True	AATAAA	-24	NA	95557855	95571598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95558328_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95568973_95570519
ES.6074.3	chr11	+	1017	7	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	-21	321	at_least_one_novel_splicesite	FALSE	canonical	2	220	junction_1	2166.48730667872	754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCTAATTATCAAGCGAA	NA	False	NA	1	True	AATAAA	-17	NA	95557804	95570855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95557853_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.30	chr11	+	1976	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	26	327	intron_retention	FALSE	canonical	3	4384	junction_2	706.937507846344	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCAAGCGAAGCTTTT	NA	False	NA	7	True	AATAAA	-23	NA	95557861	95570861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.31	chr11	+	1793	7	FSM	ENSMUSG00000038845.12	ENSMUST00000036374.6	724	7	-21	-1048	-21	-17	multi-exon	FALSE	canonical	3	311	junction_1	2134.13703610825	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCTTCCAGCTGCACTC	NA	False	NA	-6	True	AATAAA	-8	NA	95557868	95571582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95557966_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.32	chr11	+	1080	7	NNC	ENSMUSG00000038845.12	novel	733	3	NA	NA	332	326	at_least_one_novel_splicesite	FALSE	canonical	2	203	junction_1	2172.53605007809	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATCAAGCGAAGCTTT	NA	False	NA	6	True	AATAAA	-22	NA	95558221	95570860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95558328_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.33	chr11	+	1714	6	ISM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	1078	1	971	-1	3prime_fragment	FALSE	canonical	3	4384	junction_2	706.937507846344	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGGTGTGTTTTCAAT	NA	False	NA	10	True	AATAAA	-24	NA	95558860	95571598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6074.34	chr11	+	1286	3	ISM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	8612	8	4119	-8	3prime_fragment	FALSE	canonical	3	6196	junction_2	69	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCACTCGGGGTGTGT	NA	False	NA	3	True	AATAAA	-17	NA	95566394	95571591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95566513_95568876_95568973_95570519
ES.6074.4	chr11	+	1777	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	23	-1	-20	1	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGTGTGTTTTCAATTT	NA	False	NA	12	True	AATAAA	-26	NA	95557805	95571600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ES.6075.1	chr11	-	155	1	Antisense	novelGene_ENSMUSG00000038845.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	9810	False	NA	NA	False	NA	NA	NA	95559229	95559074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_95559100_95559200
ES.6076.1	chr11	-	156	1	Intergenic	novelGene_4886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAACAAAAACCAA	8942	False	NA	NA	False	NA	NA	NA	95572065	95571909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95571900_95572100
ES.6077.1	chr11	+	180	1	Intergenic	novelGene_4887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	95591981	95592161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95592000_95592200
ES.6078.1	chr11	+	2833	6	NNC	ENSMUSG00000075595.10	novel	2663	5	NA	NA	-8767	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.7722088133671	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTCTCAAAGAT	NA	False	NA	5	True	GATAAA	-15	NA	95594731	95655537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95594835_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.10	chr11	+	10603	7	NNC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-118	0	intron_retention	FALSE	canonical	0	0	junction_6	26.4175867347661	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCACGTGTCTTCTCTTC	NA	False	NA	9	True	AGTAAA	-19	NA	95603718	95663179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364_95661362_95661466
ES.6078.11	chr11	+	2981	7	NNC	ENSMUSG00000075595.10	novel	2663	5	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.4175867347661	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTCTCAAAGAT	NA	False	NA	5	True	GATAAA	-15	NA	95603719	95655537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95604055_95639825_95640434_95640517_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.12	chr11	+	3154	7	NNC	ENSMUSG00000075595.10	novel	2663	5	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.2903494354996	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTCTCAAAGAT	NA	False	NA	5	True	GATAAA	-15	NA	95603771	95655537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95604055_95639142_95639284_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.13	chr11	+	7348	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-21	-2723	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	20.899760764181	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTCTCTCGTGTCCC	NA	False	NA	NA	False	NA	NA	NA	95603815	95660456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640434_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.14	chr11	+	10039	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	9	-2	intron_retention	FALSE	canonical	3	20	junction_2	20.899760764181	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCACGTGTCTTCTCT	NA	False	NA	7	True	AGTAAA	-17	NA	95603845	95663177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640434_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.15	chr11	+	2946	6	NNC	ENSMUSG00000075595.10	novel	2663	5	NA	NA	3342	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27.7272429209974	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTCTCAAAGAT	NA	False	NA	5	True	GATAAA	-15	NA	95607178	95655537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95607395_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.16	chr11	+	3307	1	Intergenic	novelGene_4890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTAAGGTGATTATAAT	3026	False	NA	NA	False	TTTAAA	-21	NA	95614310	95617617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95614300_95617600
ES.6078.17	chr11	+	1667	1	NIC	ENSMUSG00000075595.10	novel	10433	6	NA	NA	230	-13748	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGTGTGGGAAGTTT	NA	False	NA	NA	False	GATAAA	-8	NA	95640122	95641789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95640100_95641800
ES.6078.2	chr11	+	2809	6	FSM	ENSMUSG00000075595.10	ENSMUST00000107717.8	10433	6	-14	7638	-14	4	multi-exon	FALSE	canonical	0	0	junction_1	28.7722088133671	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTCTCAAAGATGCAT	NA	False	NA	9	True	GATAAA	-19	NA	95603484	95655541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95603560_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.3	chr11	+	3210	5	NIC	ENSMUSG00000075595.10	novel	10433	6	NA	NA	11	-3	intron_retention	FALSE	canonical	0	0	junction_1	27.5862284482674	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAATGTGATTCTCAAA	NA	False	NA	2	True	GATAAA	-12	NA	95603509	95655534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95603560_95639825_95640974_95643700_95643849_95644187_95644882_95654364
ES.6078.4	chr11	+	10777	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	155	4	intron_retention	FALSE	canonical	3	40	junction_2	14.0285423334001	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTCTTCTCTTCATTT	NA	False	NA	13	True	AGTAAA	-23	NA	95603653	95663183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.5	chr11	+	3163	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	159	36	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	14.0285423334001	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAACTATTCTTACATC	NA	False	NA	41	True	NA	NA	NA	95603657	95655573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.6	chr11	+	5238	7	NNC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-165	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.4175867347661	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCCCACGTGTCTTCT	NA	False	NA	5	True	AGTAAA	-15	NA	95603671	95663175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364_95655154_95660666
ES.6078.7	chr11	+	2689	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	-161	-420	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	14.0285423334001	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGGATTTTATAATTT	NA	False	NA	NA	False	TATAAA	-15	NA	95603675	95655117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.8	chr11	+	2593	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-136	49	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	20.899760764181	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACATCCATACAACTCAAA	NA	False	NA	54	True	NA	NA	NA	95603700	95655586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640434_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6078.9	chr11	+	5899	6	NIC	ENSMUSG00000075595.10	novel	6568	7	NA	NA	-126	2825	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	14.0285423334001	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCAGGTACTGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	95603710	95658362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ES.6079.1	chr11	+	176	1	Intergenic	novelGene_4893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAACCAAACAAAC	6244	False	NA	NA	False	NA	NA	NA	95673241	95673417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95673200_95673400
ES.608.1	chr1	+	2730	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCCTTTTTTTGTGA	NA	False	NA	NA	False	ATTAAA	-11	NA	61834681	61837411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_61834700_61837400
ES.6080.1	chr11	+	175	1	Intergenic	novelGene_4896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATATATATGAGCTTA	NA	False	NA	NA	False	NA	NA	NA	95708732	95708907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95708700_95708900
ES.6081.1	chr11	+	2057	3	FSM	ENSMUSG00000050860.7	ENSMUST00000150134.2	590	3	-22	-1445	-22	6	multi-exon	FALSE	canonical	3	31	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTCTCTTGTGCCAC	2175	False	NA	26	True	AATAAA	-22	NA	95715302	95722972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95715536_95719491_95719602_95721258
ES.6081.2	chr11	+	2042	4	NNC	ENSMUSG00000050860.7	novel	1910	3	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_3	15.1730755689881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGACTTGTTCTCTT	2191	False	NA	19	True	AATAAA	-15	NA	95715318	95722965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95715536_95719491_95719602_95720551_95720678_95721376
ES.6081.3	chr11	+	3687	2	ISM	ENSMUSG00000050860.7	ENSMUST00000054173.4	1910	3	-4	2	-3	-2	intron_retention	FALSE	canonical	3	34	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGGGACTTGTTCTCT	2194	False	NA	18	True	AATAAA	-14	NA	95715321	95722964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95715536_95719491
ES.6081.4	chr11	+	1906	3	FSM	ENSMUSG00000050860.7	ENSMUST00000054173.4	1910	3	3	1	3	-1	multi-exon	FALSE	canonical	3	8	junction_2	13	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGGACTTGTTCTCTT	2201	False	NA	19	True	AATAAA	-15	NA	95715328	95722965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95715536_95719491_95719602_95721376
ES.6081.5	chr11	+	2148	4	NNC	ENSMUSG00000050860.7	novel	590	3	NA	NA	3	1	intron_retention	FALSE	canonical	0	0	junction_3	15.1730755689881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGACTTGTTCTCTTGT	2201	False	NA	21	True	AATAAA	-17	NA	95715328	95722967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95715536_95719491_95719602_95720551_95720674_95721258
ES.6082.1	chr11	+	544	4	FSM	ENSMUSG00000038811.14	ENSMUST00000107714.9	558	4	2	12	2	-12	multi-exon	FALSE	canonical	2	7	junction_2	4.54606056566195	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCAACAACCTCGGAG	NA	False	NA	NA	False	AATAAA	-10	NA	95733122	95736548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95733253_95734637_95734722_95735876_95735967_95736308
ES.6083.1	chr11	+	347	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	6	916	6	-916	multi-exon	TRUE	canonical	3	111	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGGCTATTGTATAAG	1032	False	NA	7	True	AATATA	-18	NA	95749696	95750954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95749909_95750819
ES.6083.2	chr11	+	3416	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	11	-2158	11	2158	multi-exon	FALSE	canonical	3	111	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTTCCCTGTCTTTGC	1037	False	NA	NA	False	NA	NA	NA	95749701	95754028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95749909_95750819
ES.6083.3	chr11	+	2524	1	Intergenic	novelGene_4898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTCACTCATTCCTTC	2246	False	NA	NA	False	NA	NA	NA	95753608	95756132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95753600_95756100
ES.6084.1	chr11	+	181	1	Intergenic	novelGene_4899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTGTCTCTGA	4622	False	NA	NA	False	NA	NA	NA	95768246	95768427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95768200_95768400
ES.6085.1	chr11	+	2556	1	Intergenic	novelGene_4900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGAGTCAT	6420	False	NA	NA	False	NA	NA	NA	95776175	95778731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95776200_95778700
ES.6085.10	chr11	+	3875	1	Antisense	novelGene_ENSMUSG00000093358.3_AS_novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAGCCATGGTGGAAC	9568	False	NA	NA	False	NA	NA	NA	95853438	95857313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95853400_95857300
ES.6085.11	chr11	+	2559	15	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	-42827	-2036	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAAGCCACGTGGTGACA	NA	False	NA	NA	False	NA	NA	NA	95853887	95896845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95854419_95857002_95857113_95857472_95857607_95858372_95858450_95859188_95859309_95859624_95859748_95860674_95860810_95861493_95861617_95863869_95864008_95864765_95865047_95866085_95866152_95870109_95870158_95870444_95870495_95895047_95895109_95896283
ES.6085.12	chr11	+	1818	1	Antisense	novelGene_ENSMUSG00000093358.3_AS_novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCGGCGCACACCTTTA	NA	False	NA	NA	False	NA	NA	NA	95853891	95855709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95853900_95855700
ES.6085.14	chr11	+	1221	1	Antisense	novelGene_ENSMUSG00000093358.3_AS_novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	95853891	95855112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95853900_95855100
ES.6085.15	chr11	+	838	2	Antisense	novelGene_ENSMUSG00000093358.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAGCCATGGTGGAAC	NA	False	NA	NA	False	NA	NA	NA	95853891	95857313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95854419_95857002
ES.6085.18	chr11	+	2555	15	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	-42822	-2036	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGAAGCCACGTGGTGACA	NA	False	NA	NA	False	NA	NA	NA	95853892	95896845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95854419_95857002_95857113_95857472_95857606_95858372_95858443_95859178_95859305_95859623_95859747_95860672_95860810_95861493_95861617_95863869_95864008_95864765_95865047_95866085_95866152_95870109_95870158_95870444_95870495_95895047_95895110_95896283
ES.6085.2	chr11	+	4365	2	Antisense	novelGene_ENSMUSG00000103376.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACCCCCCCTCAAAACA	6425	False	NA	NA	False	NA	NA	NA	95776180	95910067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95780489_95910010
ES.6085.20	chr11	+	173	1	Intergenic	novelGene_4914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTTTAAAGAACACTTA	9010	False	NA	NA	False	NA	NA	NA	95867928	95868101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95867900_95868100
ES.6085.21	chr11	+	382	1	Intergenic	novelGene_4915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGTCAATCTGCAG	NA	False	NA	NA	False	NA	NA	NA	95875928	95876310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95875900_95876300
ES.6085.22	chr11	+	4440	1	Intergenic	novelGene_4916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAATAAATCTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	95885057	95889497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95885100_95889500
ES.6085.23	chr11	+	718	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	-623	-2072	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGGAG	NA	False	NA	NA	False	AATAAA	-10	NA	95896091	95896809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95896100_95896800
ES.6085.24	chr11	+	508	1	Intergenic	novelGene_4917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTGGATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	95898023	95898531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95898000_95898500
ES.6085.25	chr11	+	3499	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1309	2785	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGAATGTTTTTTT	NA	False	NA	NA	False	CATAAA	-20	NA	95898023	95901666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95898430_95898573
ES.6085.26	chr11	+	2415	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	1370	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAGGAAAAATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	95898084	95900499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95898100_95900500
ES.6085.27	chr11	+	1303	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	1420	556	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	AAAACA	-18	NA	95898134	95899437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95898100_95899400
ES.6085.28	chr11	+	621	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1440	38	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGAAATGTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	95898154	95898919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95898430_95898573
ES.6085.29	chr11	+	3495	1	Genic_Genomic	ENSMUSG00000099928.2	novel	NA	NA	NA	NA	1452	2780	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTTTAAAGGAATGTT	NA	False	NA	NA	False	CATAAA	-15	NA	95898166	95901661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95898200_95901700
ES.6085.3	chr11	+	167	1	Intergenic	novelGene_4907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAGCAATCAGGGAC	4055	False	NA	NA	False	NA	NA	NA	95829285	95829452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95829300_95829500
ES.6085.30	chr11	+	1693	1	Intergenic	novelGene_4918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCTAAGCCTTTCTT	NA	False	NA	NA	False	AATAAA	-32	NA	95900201	95901894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95900200_95901900
ES.6085.31	chr11	+	209	1	Intergenic	novelGene_4919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTAATAATCATTTCT	NA	False	NA	NA	False	NA	NA	NA	95904298	95904507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95904300_95904500
ES.6085.32	chr11	+	287	1	Intergenic	novelGene_4920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATTGAATAATCAG	NA	False	NA	NA	False	TATAAA	-9	NA	95904810	95905097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95904800_95905100
ES.6085.4	chr11	+	283	1	Intergenic	novelGene_4908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAAATAAATA	4063	False	NA	NA	False	NA	NA	NA	95829293	95829576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95829300_95829600
ES.6085.5	chr11	+	175	1	Intergenic	novelGene_4909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	999	False	NA	NA	False	NA	NA	NA	95832530	95832705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95832500_95832700
ES.6085.6	chr11	+	146	1	Intergenic	novelGene_4910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAAGTGTGGCCTTG	3643	False	NA	NA	False	NA	NA	NA	95835174	95835320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95835200_95835300
ES.6085.7	chr11	+	205	2	Intergenic	novelGene_4911	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGAAGCCCCAACTTCA	3647	False	NA	NA	False	NA	NA	NA	95835178	95845899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95835330_95845845
ES.6085.8	chr11	+	2916	1	Antisense	novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGACAAGCAGGGTAAG	4347	False	NA	NA	False	NA	NA	NA	95848217	95851133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95848200_95851100
ES.6085.9	chr11	+	4319	1	Antisense	novelGene_ENSMUSG00000013415.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAATTAAAAACCAG	4347	False	NA	NA	False	TATAAA	-45	NA	95848217	95852536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_95848200_95852500
ES.6086.1	chr11	-	301	1	Intergenic	novelGene_4888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACATTTGAGAG	NA	False	NA	NA	False	AATAAA	-11	NA	95599885	95599584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95599600_95599900
ES.6086.2	chr11	-	172	1	Intergenic	novelGene_4889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGAGCAAGTGGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	95599885	95599713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95599700_95599900
ES.6087.1	chr11	-	6043	1	Intergenic	novelGene_4891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACTCCTCACAATGCA	NA	False	NA	NA	False	AAAAAG	-5	NA	95630110	95624067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95624100_95630100
ES.6087.10	chr11	-	3002	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	29	2377	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGACTCGGGTGGTGTG	2919	False	NA	-6	True	NA	NA	NA	95805688	95754391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755694_95756761_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.11	chr11	-	3110	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	18	2376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGACTCGGGTGGTGT	2908	False	NA	-7	True	NA	NA	NA	95805699	95754392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755651_95756620_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.12	chr11	-	3217	8	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	0	2376	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.5864100548524	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGACTCGGGTGGTGT	2890	False	NA	-7	True	NA	NA	NA	95805717	95754392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755367_95763283_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.13	chr11	-	3127	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	18	2376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGACTCGGGTGGTGT	2908	False	NA	-7	True	NA	NA	NA	95805699	95754392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755692_95756644_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.14	chr11	-	3005	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	27	2375	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGACTCGGGTGGTG	2917	False	NA	-8	True	NA	NA	NA	95805690	95754393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755691_95756755_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.15	chr11	-	2911	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	29	2375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGACTCGGGTGGTG	2919	False	NA	-8	True	NA	NA	NA	95805688	95754393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755692_95756848_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.16	chr11	-	4121	11	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	-129	2375	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	9.5608577021102	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGACTCGGGTGGTG	2761	False	NA	-8	True	NA	NA	NA	95805846	95754393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805750
ES.6087.17	chr11	-	3210	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	-118	2375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.3807144396573	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGACTCGGGTGGTG	2772	False	NA	-8	True	NA	NA	NA	95805835	95754393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755699_95756598_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805750
ES.6087.18	chr11	-	3178	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	18	2374	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTGGACTCGGGTGGT	2908	False	NA	-9	True	NA	NA	NA	95805699	95754394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755699_95756598_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.19	chr11	-	3104	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	-112	-1270	-112	1270	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGAGCCTTCATGTGG	2778	False	NA	NA	False	NA	NA	NA	95805829	95755498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.2	chr11	-	209	2	Antisense	novelGene_ENSMUSG00000082981.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAACTCCTCACAATGCA	NA	False	NA	NA	False	AAAAAG	-5	NA	95780796	95624067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_95624096_95780615
ES.6087.20	chr11	-	2047	12	NNC	ENSMUSG00000013418.9	novel	1722	11	NA	NA	-32	1270	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.1068669888635	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGAGCCTTCATGTGG	2858	False	NA	NA	False	NA	NA	NA	95805749	95755498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95755646_95756622_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6087.21	chr11	-	4678	5	ISM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	23860	3713	23860	-3713	internal_fragment	FALSE	canonical	3	23	junction_1	4.38035386698381	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGATTAAACAACTCCT	NA	False	NA	NA	False	NA	NA	NA	95781857	95760481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798
ES.6087.22	chr11	-	1629	3	ISM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	18	23809	18	-23809	5prime_fragment	FALSE	canonical	3	31	junction_1	3	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2908	False	NA	NA	False	NA	NA	NA	95805699	95780577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95781937_95782583_95782800_95805645
ES.6087.23	chr11	-	181	1	Intergenic	novelGene_4901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACATT	NA	False	NA	NA	False	NA	NA	NA	95781587	95781406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95781400_95781600
ES.6087.24	chr11	-	176	1	Intergenic	novelGene_4902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	95784551	95784375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95784400_95784600
ES.6087.25	chr11	-	457	1	Intergenic	novelGene_4903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAACAGCCTTTAAAAA	2952	False	NA	NA	False	NA	NA	NA	95796863	95796406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95796400_95796900
ES.6087.3	chr11	-	178	1	Intergenic	novelGene_4892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95630333	95630155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95630200_95630300
ES.6087.4	chr11	-	190	1	Intergenic	novelGene_4894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCTGTGGATC	NA	False	NA	NA	False	NA	NA	NA	95676008	95675818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95675800_95676000
ES.6087.5	chr11	-	175	1	Intergenic	novelGene_4895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGTGAGCAGGGAT	NA	False	NA	NA	False	NA	NA	NA	95693374	95693199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95693200_95693400
ES.6087.6	chr11	-	130	1	Intergenic	novelGene_4897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCAAAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	95740500	95740370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95740400_95740500
ES.6087.7	chr11	-	2478	1	Genic_Genomic	ENSMUSG00000085578.2	novel	NA	NA	NA	NA	-555	910	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95750555	95748077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_95748100_95750600
ES.6087.8	chr11	-	4108	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	-3	-2383	-3	2383	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGGTGGTGTGCTTATT	2887	False	NA	0	True	NA	NA	NA	95805720	95754385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ES.6088.1	chr11	-	87	1	Intergenic	novelGene_4904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	95814319	95814232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95814200_95814300
ES.6089.1	chr11	-	811	1	Intergenic	novelGene_4905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3095	False	NA	NA	False	NA	NA	NA	95821315	95820504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95820500_95821300
ES.609.1	chr1	-	1786	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61915232	61913446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_61913400_61915200
ES.6090.1	chr11	-	235	1	Intergenic	novelGene_4906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTTCTCTCTATGGA	8694	False	NA	NA	False	NA	NA	NA	95823118	95822883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95822900_95823100
ES.6091.1	chr11	-	183	1	Intergenic	novelGene_4912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	1911	False	NA	NA	False	NA	NA	NA	95840557	95840374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95840400_95840600
ES.6092.1	chr11	-	244	1	Intergenic	novelGene_4913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGTTAAAAATGCAAAA	273	False	NA	NA	False	AAAAAG	-19	NA	95842195	95841951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95842000_95842200
ES.6093.1	chr11	-	8383	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	172.580076060538	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTCTGTGCTTCTGGG	NA	False	NA	-1	True	AATAAA	-23	NA	95896768	95847984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857603_95858369_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.11	chr11	-	2939	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	35	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	171.496430021747	1049	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95896731	95847991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95849099_95857083_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.13	chr11	-	8026	15	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	223.647955866503	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTGTGTCTGTGC	NA	False	NA	-8	True	AATAAA	-16	NA	95873439	95847991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
ES.6093.15	chr11	-	6899	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	221.348418672869	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGAGTGTGTCTGT	NA	False	NA	-10	True	AATAAA	-14	NA	95873419	95847993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.16	chr11	-	7932	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	0	446	0	-446	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTCTCCCTTCTCTTCA	NA	False	NA	2	True	AATAAA	-18	NA	95896766	95848434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.17	chr11	-	1749	2	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	8276	-449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGAGTCTCCCTTCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	95850385	95848437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95849381_95849579
ES.6093.18	chr11	-	3436	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-31	2326	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_1	184.047409351202	725	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGGTTATTGTTT	NA	False	NA	-2	True	NA	NA	NA	95896797	95851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.19	chr11	-	4433	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-2	3947	-2	2326	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTGGTTATTGTTT	NA	False	NA	-2	True	NA	NA	NA	95896768	95851935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.2	chr11	-	7947	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	-5	True	AATAAA	-19	NA	95873439	95847988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.21	chr11	-	4295	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	29	4054	29	2219	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTATTTCTTTAAAAATA	NA	False	NA	NA	False	ACTAAA	-24	NA	95896737	95852042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.22	chr11	-	3992	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-30	4416	-30	1857	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTTTCATAATTTCTT	NA	False	NA	NA	False	AAGAAA	-11	NA	95896796	95852404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.24	chr11	-	3382	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	1806	intron_retention	FALSE	non_canonical	0	0	junction_13	228.243511609237	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATAGTCTTGAATATTT	NA	False	NA	96	True	NA	NA	NA	95873437	95852455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.25	chr11	-	3504	15	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	28	1795	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	223.647955866503	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAGAGAAGCTGATAGT	NA	False	NA	85	True	NA	NA	NA	95873392	95852466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
ES.6093.26	chr11	-	2951	10	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-6164	1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	207.027522474014	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCGAAG	NA	False	NA	66	True	NA	NA	NA	95864825	95852485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857603_95858369_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764
ES.6093.27	chr11	-	2828	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	30	1776	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_1	159.281665262794	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCGAAG	NA	False	NA	66	True	NA	NA	NA	95896736	95852485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.28	chr11	-	3567	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-119	1776	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCGAAG	NA	False	NA	66	True	NA	NA	NA	95873556	95852485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.29	chr11	-	2746	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	34	1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	233.880147659838	678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCGAAG	NA	False	NA	66	True	NA	NA	NA	95896732	95852485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.32	chr11	-	2837	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	20	1776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	212.594721372746	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGCGAAG	NA	False	NA	66	True	NA	NA	NA	95896746	95852485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857603_95858369_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.33	chr11	-	2756	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	1678	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	259.041172188687	676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTTTTCCTTTTGTTCC	NA	False	NA	-32	True	AGTAAA	-29	NA	95896766	95852583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858373_95858450_95859188_95859306_95859624_95859742_95860670_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.34	chr11	-	4019	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-238	4597	-238	1676	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGGTTTTCCTTTTGTT	NA	False	NA	-34	True	AGTAAA	-27	NA	95897004	95852585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.35	chr11	-	3349	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-5	1675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAATGGTTTTCCTTTTGT	NA	False	NA	-35	True	AGTAAA	-26	NA	95873442	95852586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.36	chr11	-	2894	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-5	1675	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.865819431275	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAATGGTTTTCCTTTTGT	NA	False	NA	-35	True	AGTAAA	-26	NA	95896771	95852586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853346_95854236_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.38	chr11	-	3817	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	35	1671	intron_retention	FALSE	non_canonical	3	38	junction_1	167.564206540685	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCAATGGTTTTCCTT	NA	False	NA	-39	True	AGTAAA	-22	NA	95896731	95852590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857609_95858374_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.39	chr11	-	2319	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	1670	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	221.348418672869	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCAATGGTTTTCCT	NA	False	NA	-40	True	AGTAAA	-21	NA	95873437	95852591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.4	chr11	-	7474	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-119	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_1	159.281665262794	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	-5	True	AATAAA	-19	NA	95896885	95847988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.41	chr11	-	3348	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	5	1257	intron_retention	FALSE	non_canonical	3	24	junction_14	234.843771343367	641	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTATGCCTCCGTGAA	NA	False	NA	-2	True	NA	NA	NA	95873429	95853004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874
ES.6093.42	chr11	-	3574	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-229	5033	-229	1240	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGTATTTAACTGACT	NA	False	NA	-19	True	NA	NA	NA	95896995	95853021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.43	chr11	-	3083	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	1236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	240.619364498015	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGAGGAGTATTTAACT	NA	False	NA	-23	True	NA	NA	NA	95873437	95853025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95872053_95873327
ES.6093.44	chr11	-	2418	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	1072	1236	at_least_one_novel_splicesite	FALSE	non_canonical	3	38	junction_1	189.21297793864	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGAGGAGTATTTAACT	NA	False	NA	-23	True	NA	NA	NA	95895694	95853025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048
ES.6093.45	chr11	-	1805	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	26	1206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	271.228281365061	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTGGAGAATGTCGC	NA	False	NA	-53	True	GATAAA	-33	NA	95873394	95853055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853343_95854365_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860807_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.47	chr11	-	2875	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-6	5509	-6	764	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCACAGCAGAAATTCCT	NA	False	NA	64	True	AAAAAG	-38	NA	95896772	95853497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.49	chr11	-	2658	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-247	309	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTGTTTCTTAACCCC	NA	False	NA	NA	False	AATAAA	-32	NA	95897013	95853952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.5	chr11	-	8625	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-247	0	-247	0	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	-5	True	AATAAA	-19	NA	95897013	95847988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.50	chr11	-	3460	12	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	7	307	intron_retention	FALSE	canonical	0	0	junction_11	191.247319432411	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95873413	95853954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.51	chr11	-	3156	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-5	307	intron_retention	FALSE	canonical	3	452	junction_4	74.0461234796722	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95896771	95853954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.53	chr11	-	2007	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-30	305	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGTTTGTTTCTTAA	NA	False	NA	NA	False	AATAAA	-28	NA	95873467	95853956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
ES.6093.54	chr11	-	3044	14	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	541	5968	541	305	3prime_fragment	FALSE	canonical	3	452	junction_5	63.3990834869263	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGTTTGTTTCTTAA	NA	False	NA	NA	False	AATAAA	-28	NA	95896225	95853956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048
ES.6093.55	chr11	-	3690	15	FSM	ENSMUSG00000103376.2_ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-1280	5968	-65	305	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGGTTTGTTTCTTAA	NA	False	NA	NA	False	AATAAA	-28	NA	95898046	95853956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.6	chr11	-	7496	16	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	167.865819431275	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	-5	True	AATAAA	-19	NA	95896770	95847988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95853348_95854233_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.62	chr11	-	2091	15	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-35	302	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	223.647955866503	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATGGTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	95873472	95853959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
ES.6093.63	chr11	-	2374	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	40	302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	173.746839642378	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATGGTTTGTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	95896726	95853959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863863_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.67	chr11	-	2130	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	1	296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	240.619364498015	577	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCAAAGGATGGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	95873433	95853965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95872044_95873327
ES.6093.68	chr11	-	3897	13	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	7	294	intron_retention	FALSE	canonical	3	452	junction_3	76.3771708183946	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACCTCAAAGGATGGT	NA	False	NA	NA	False	AATAAA	-17	NA	95896759	95853967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95854419_95857002_95857117_95857476_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6093.71	chr11	-	2429	14	ISM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	-31	8564	-31	-2291	5prime_fragment	FALSE	canonical	3	452	junction_4	72.4485534666379	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATTGTATCTGTTCTTCA	NA	False	NA	NA	False	CATAAA	-19	NA	95896797	95856552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ES.6094.1	chr11	+	4964	1	NIC	ENSMUSG00000006058.11	novel	1004	8	NA	NA	28	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	3225	False	NA	NA	False	NA	NA	NA	95925738	95930702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95925700_95930700
ES.6094.11	chr11	+	476	4	FSM	ENSMUSG00000006058.11	ENSMUST00000150946.8	484	4	8	0	3	0	multi-exon	FALSE	canonical	1	6	junction_3	334.70617296701	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3271	False	NA	NA	False	NA	NA	NA	95925784	95930704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95930527
ES.6094.12	chr11	+	3049	2	Genic_Genomic	ENSMUSG00000006058.11	novel	1004	8	NA	NA	450	27	multi-exon	TRUE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTACTTTTAGGGGGCCG	3727	False	NA	NA	False	NA	NA	NA	95926240	95930731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_95926987_95928428
ES.6094.13	chr11	+	3140	1	NIC	ENSMUSG00000006058.11	novel	1004	8	NA	NA	-422	-23	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCATTCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	95935093	95938233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95935100_95938200
ES.6094.2	chr11	+	898	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	-52	3	28	-3	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTGTTCCCCCAG	3225	False	NA	18	True	AATAAA	-40	NA	95925738	95938253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
ES.6094.3	chr11	+	968	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	35	1	-31	-1	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTTCCCCCAGTA	3232	False	NA	20	True	AATAAA	-42	NA	95925745	95938255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
ES.6094.5	chr11	+	2638	7	NIC	ENSMUSG00000006058.11	novel	1004	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	665	junction_5	22.4103150852955	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTTCCCCCAGTA	3246	False	NA	20	True	AATAAA	-42	NA	95925759	95938255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95936129_95937105_95937181_95938020
ES.6094.6	chr11	+	779	3	ISM	ENSMUSG00000006058.11	ENSMUST00000150946.8	484	4	-12	1	-12	-1	intron_retention	FALSE	canonical	3	713	junction_1	3	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	3251	False	NA	NA	False	NA	NA	NA	95925764	95930703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_95925894_95926144_95926196_95930104
ES.6094.8	chr11	+	920	8	NNC	ENSMUSG00000006058.11	novel	1004	8	NA	NA	-11	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.732068633004	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCATTCCAAG	3252	False	NA	-2	True	AATAAA	-20	NA	95925765	95938233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95925894_95926150_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
ES.6094.9	chr11	+	951	8	NNC	ENSMUSG00000006058.11	novel	1004	8	NA	NA	-10	-23	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	239.782895000235	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTCATTCCAAG	3253	False	NA	-2	True	AATAAA	-20	NA	95925766	95938233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934329_95935986_95936129_95937105_95937181_95938020
ES.6095.1	chr11	+	312	1	Intergenic	novelGene_4923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	95946219	95946531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95946200_95946500
ES.6096.1	chr11	-	176	1	Intergenic	novelGene_4921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATAGATAGATAT	NA	False	NA	NA	False	NA	NA	NA	95927060	95926884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95926900_95927100
ES.6097.1	chr11	-	4923	1	Genic_Genomic	ENSMUSG00000014349.8	novel	NA	NA	NA	NA	16389	3355	mono-exon	FALSE	NA	NA	NA	NA	NA	1011	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGCAATGGTTCTAAA	NA	False	NA	NA	False	NA	NA	NA	95939825	95934902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_95934900_95939800
ES.6097.10	chr11	-	2809	6	NIC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	16	-1059	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	435.704027982299	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAAGCGCCTGTGGGTGTG	5483	False	NA	-3	True	AATAAA	-19	NA	95956198	95939316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95941241_95942559_95942651_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.12	chr11	-	2833	8	NNC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	33	-1065	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	383.39711388947	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGAGGAAGCGCCTGTG	5500	False	NA	-9	True	AATAAA	-13	NA	95956181	95939322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777_95955880_95955945
ES.6097.14	chr11	-	2174	3	NNC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	101	-1068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	541.5	1043	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAAGGAGGAAGCGCCT	5568	False	NA	-12	True	AATAAA	-10	NA	95956113	95939325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95941155_95953884_95953894_95955777
ES.6097.16	chr11	-	4738	6	NIC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	33	-1096	intron_retention	FALSE	canonical	3	1035	junction_3	39.6988664825584	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTGGTGCAATAAAG	5500	False	NA	-40	True	CATAAA	-17	NA	95956181	95939353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95953894_95955777
ES.6097.18	chr11	-	2676	8	NNC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	66	-1142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	383.39711388947	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTCTTTATATCTGAC	5533	False	NA	-86	True	AATATA	-16	NA	95956148	95939399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777_95955880_95955992
ES.6097.2	chr11	-	5772	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-13	-1762	-13	1762	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTCTCTGTCATGTTTAT	5454	False	NA	NA	False	AAGAAA	-7	NA	95956227	95936495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.20	chr11	-	1982	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	27	1988	27	-1988	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTAGTCAATGAGGGTG	5494	False	NA	NA	False	CATAAA	-24	NA	95956187	95940245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.21	chr11	-	1909	7	NNC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	38	-1999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	408.531380543636	1013	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCCTGAATAGTAGT	5505	False	NA	NA	False	CATAAA	-13	NA	95956176	95940256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951813_95951951_95953820_95953894_95955777
ES.6097.22	chr11	-	180	1	Intergenic	novelGene_4922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTATTAAT	NA	False	NA	NA	False	NA	NA	NA	95945035	95944855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95944900_95945000
ES.6097.23	chr11	-	174	1	Intergenic	novelGene_4924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	940	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAGGAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	95947355	95947181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95947200_95947400
ES.6097.3	chr11	-	5514	6	NIC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	45	1750	intron_retention	FALSE	canonical	2	11	junction_4	432.026665843672	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATGAACACGTCTC	5512	False	NA	NA	False	NA	NA	NA	95956169	95936507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95953820_95953894_95955777
ES.6097.4	chr11	-	5541	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-6	-1538	-6	1538	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGTCCAAAGCACTAAGA	5461	False	NA	NA	False	NA	NA	NA	95956220	95936719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.5	chr11	-	4956	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	92	-1051	92	1051	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCCAGGACCATCTGTC	5559	False	NA	NA	False	AATAAA	-15	NA	95956122	95937206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.6	chr11	-	3974	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	27	-4	27	4	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAATGAACTTTTTTTT	5494	False	NA	NA	False	AATAAA	-23	NA	95956187	95938253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.7	chr11	-	3693	5	NIC	ENSMUSG00000014349.8	novel	3997	7	NA	NA	34	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	473.05463479391	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAATAACTTGGAA	5501	False	NA	NA	False	AATAAA	-10	NA	95956180	95938266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95955777
ES.6097.8	chr11	-	3360	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-5	642	-5	-642	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACAGAAGGTGTTTCCT	5462	False	NA	NA	False	NA	NA	NA	95956219	95938899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6097.9	chr11	-	2984	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	-43	1056	-43	-1056	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGCCTGTGGGTGTGGGA	5424	False	NA	0	True	AATAAA	-22	NA	95956257	95939313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ES.6098.1	chr11	-	174	1	ISM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	6630	15	5997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTTTAAAATATCT	6588	False	NA	NA	False	NA	NA	NA	95959866	95959692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_95959700_95959900
ES.6099.1	chr11	-	1236	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	10	-650	10	647	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATGGCTCTGTGGTGTA	3540	False	NA	NA	False	ATTAAA	-20	NA	95966435	95963165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ES.6099.10	chr11	-	905	4	NIC	ENSMUSG00000006057.16	novel	596	5	NA	NA	-4	1	intron_retention	FALSE	canonical	3	5157	junction_3	2373.08088545015	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3526	False	NA	-8	True	NA	NA	NA	95966449	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95964528_95964787_95964866_95965812_95965860_95966382
ES.6099.11	chr11	-	1828	3	NIC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	1	1	intron_retention	FALSE	canonical	3	2808	junction_2	4016.5	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3480	False	NA	-8	True	NA	NA	NA	95966495	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95964528_95964787_95965860_95966452
ES.6099.12	chr11	-	2635	1	NIC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	-4	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	913	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3526	False	NA	-8	True	NA	NA	NA	95966449	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95963800_95966400
ES.6099.13	chr11	-	567	5	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_2	4090.75845657013	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3533	False	NA	-8	True	NA	NA	NA	95966442	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95964045_95964348_95964501_95964787_95964866_95965812_95965860_95966382
ES.6099.14	chr11	-	584	5	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4471.97374628922	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	3532	False	NA	-9	True	NA	NA	NA	95966443	95963815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965862_95966394
ES.6099.2	chr11	-	612	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	-7	-9	-7	6	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGCCTGTCTTTCTA	2	True	NA	0	True	NA	NA	NA	95966452	95963806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ES.6099.3	chr11	-	618	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	-35	4132	-35	3	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCCTGTGCCTGTCTTT	3444	False	NA	-3	True	NA	NA	NA	95966531	95963809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
ES.6099.4	chr11	-	766	6	NNC	ENSMUSG00000006057.16	novel	596	5	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4800.09984896148	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3534	False	NA	-8	True	NA	NA	NA	95966441	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95964045_95964348_95964528_95964787_95964866_95965414_95965588_95965812_95965860_95966382
ES.6099.5	chr11	-	725	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	-36	2	2	1	multi-exon	FALSE	canonical	3	143	junction_4	4410.8346149	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3532	False	NA	-8	True	NA	NA	NA	95966443	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966252
ES.6099.7	chr11	-	2394	2	NIC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	-305	1	intron_retention	FALSE	canonical	3	2808	junction_1	0	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3174	False	NA	-8	True	NA	NA	NA	95966801	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95965860_95966452
ES.6099.9	chr11	-	906	4	NIC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	-24	1	intron_retention	FALSE	canonical	3	2808	junction_3	3443.61015344201	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	3455	False	NA	-8	True	NA	NA	NA	95966520	95963814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_95964528_95964787_95964866_95965812_95965860_95966452
ES.61.1	chr1	+	1981	12	NNC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	9	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.4693399428994	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTATGCTTCCAGGT	NA	False	NA	NA	False	AATAAA	-23	NA	9618288	9647151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9618377_9620131_9620170_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633810_9634021_9634119_9637005_9637164_9646415
ES.61.10	chr1	+	1724	13	NIC	ENSMUSG00000025911.15	novel	3239	14	NA	NA	-18	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.9449202906636	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	9618298	9646959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.11	chr1	+	3617	2	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	-17	4971	intron_retention	FALSE	canonical	1	3	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGGTCACCAATGCACA	NA	False	NA	NA	False	NA	NA	NA	9618299	9630764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9627224
ES.61.12	chr1	+	2058	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	132	1049	-12	20	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGTATTTTATGCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	9618304	9647146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.13	chr1	+	3082	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	138	19	-6	-19	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCTTTATCCTTCAAG	NA	False	NA	NA	False	TATAAA	-3	NA	9618310	9648176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.14	chr1	+	3448	11	NIC	ENSMUSG00000025911.15	novel	3239	14	NA	NA	-6	-240	intron_retention	FALSE	canonical	3	16	junction_2	18.2	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAATGAATCCTAATAT	NA	False	NA	NA	False	ATTAAA	-18	NA	9618310	9646886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9620131_9620170_9621941_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.15	chr1	+	5680	7	NNC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	4838	-168	intron_retention	FALSE	canonical	0	0	junction_4	27.2763633939717	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATGTCTGTTTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	9623181	9646958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9625841_9627224_9627331_9628357_9630433_9633733_9633813_9634058_9634119_9637005_9637164_9646415
ES.61.16	chr1	+	2267	5	ISM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	10764	167	10700	-167	3prime_fragment	FALSE	canonical	3	51	junction_3	8.5841423566947	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	9629043	9646959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.17	chr1	+	384	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCCAAGACACGGAGCTA	NA	False	NA	NA	False	NA	NA	NA	9645903	9646287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9645900_9646300
ES.61.2	chr1	+	1887	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	116	1236	9	-167	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	9618288	9646959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.3	chr1	+	2512	12	NNC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	10	-168	intron_retention	FALSE	canonical	1	3	junction_1	26.8016898443437	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATGTCTGTTTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	9618289	9646958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9618377_9618664_9618842_9620131_9620170_9623147_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.4	chr1	+	1806	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	11	-167	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	9618290	9646959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.5	chr1	+	7033	9	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	13	-163	intron_retention	FALSE	canonical	3	51	junction_7	9.47364766074821	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618292	9646963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9620131_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.6	chr1	+	1548	10	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	18	-167	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	26.6333124739176	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCTGTTTCATAA	NA	False	NA	NA	False	AATAAA	-19	NA	9618297	9646959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.7	chr1	+	1584	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	-18	-381	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGCATGTCTAGACA	NA	False	NA	NA	False	CATAAA	-14	NA	9618298	9646745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ES.61.8	chr1	+	3201	3	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	-18	5581	intron_retention	FALSE	canonical	1	3	junction_1	40.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTTAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	9618298	9631374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9618377_9627224_9627331_9628357
ES.61.9	chr1	+	1721	7	NNC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	-18	-170	intron_retention	FALSE	canonical	0	0	junction_3	33.2603367391252	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATATGTCTGTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	9618298	9646956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9618377_9627224_9627331_9628357_9628712_9630333_9630433_9633733_9634119_9637005_9637164_9646415
ES.610.1	chr1	-	211	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGTAAAGAGTGGAGCT	NA	False	NA	NA	False	AAAAAG	-5	NA	62246040	62245829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_62245800_62246000
ES.6100.1	chr11	-	176	1	Intergenic	novelGene_4925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATTTCAGTAAGAGTAA	661	False	NA	NA	False	NA	NA	NA	95969314	95969138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95969100_95969300
ES.6101.1	chr11	-	172	1	Intergenic	novelGene_4926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTGT	2674	False	NA	NA	False	NA	NA	NA	95979964	95979792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95979800_95980000
ES.6102.1	chr11	+	173	1	Intergenic	novelGene_4927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTATATATATATATATA	8056	False	NA	NA	False	NA	NA	NA	95981210	95981383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95981200_95981400
ES.6103.1	chr11	+	179	1	Intergenic	novelGene_4929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	95984633	95984812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_95984600_95984800
ES.6104.1	chr11	+	132	1	Intergenic	novelGene_4931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	96000070	96000202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96000100_96000200
ES.6105.1	chr11	-	1497	7	NNC	ENSMUSG00000006056.14	novel	968	7	NA	NA	5	8786	intron_retention	FALSE	canonical	0	0	junction_1	165.726682623328	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTAAGTACACTGTAGC	4218	False	NA	NA	False	NA	NA	NA	96002783	95981365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95981841_95990743_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ES.6105.10	chr11	-	1399	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	3	219	1	-219	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGATATGTGTGTGTAT	4214	False	NA	NA	False	TTTAAA	-16	NA	96002787	95990370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ES.6105.2	chr11	-	179	1	Intergenic	novelGene_4928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	95983452	95983273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95983300_95983500
ES.6105.3	chr11	-	146	1	Intergenic	novelGene_4930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAGAAAGAGG	NA	False	NA	NA	False	AATAAA	-5	NA	95986121	95985975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_95986000_95986100
ES.6105.4	chr11	-	2082	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	-49	-412	-49	412	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCTAGTGAATCACAGT	4162	False	NA	-17	True	AATAAA	-18	NA	96002839	95989739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ES.6105.6	chr11	-	1588	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	-9	42	-9	-42	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCTGTGTTGATTT	4202	False	NA	-4	True	NA	NA	NA	96002799	95990193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ES.6105.8	chr11	-	1456	6	NNC	ENSMUSG00000006056.14	novel	1621	6	NA	NA	5	-44	intron_retention	FALSE	canonical	0	0	junction_4	168.289512448043	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTGCTGTGTTGAT	4218	False	NA	-6	True	NA	NA	NA	96002783	95990195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998370_95998431_96002762
ES.6105.9	chr11	-	1486	7	NNC	ENSMUSG00000006056.14	novel	968	7	NA	NA	5	-44	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	165.726682623328	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGTGCTGTGTTGAT	4218	False	NA	-6	True	NA	NA	NA	96002783	95990195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_95991007_95991090_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ES.6106.1	chr11	+	140	1	Intergenic	novelGene_4932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96003032	96003172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96003000_96003200
ES.6107.1	chr11	+	191	1	Intergenic	novelGene_4933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACGGTGGTGATGTTA	5884	False	NA	NA	False	NA	NA	NA	96013216	96013407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96013200_96013400
ES.6107.2	chr11	+	410	1	Intergenic	novelGene_4934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTAAAGAACATCTAAGG	5887	False	NA	NA	False	NA	NA	NA	96013219	96013629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96013200_96013600
ES.6108.1	chr11	+	5483	11	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-9253	-7619	intron_retention	FALSE	canonical	0	0	junction_4	3.37786915081091	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATAAATAAAGTAAA	8026	False	NA	NA	False	NA	NA	NA	96015358	96048658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96015454_96024568_96025735_96026310_96026430_96026550_96026682_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96045681_96047298
ES.6108.10	chr11	+	2730	4	ISM	ENSMUSG00000038756.14	ENSMUST00000167258.8	3205	15	19648	0	19215	0	3prime_fragment	FALSE	canonical	1	1	junction_3	3.39934634239519	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGAGCCTGGTCCACA	9330	False	NA	NA	False	AATAAA	-18	NA	96044259	96056277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96045681_96047298_96047633_96049513_96049785_96055573
ES.6108.11	chr11	+	2934	4	ISM	ENSMUSG00000038756.14	ENSMUST00000167258.8	3205	15	20632	-1188	20199	1188	3prime_fragment	FALSE	canonical	1	1	junction_3	3.39934634239519	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTGAAGTTGGTCTAA	NA	False	NA	NA	False	NA	NA	NA	96045243	96057465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96045681_96047298_96047633_96049513_96049785_96055573
ES.6108.12	chr11	+	771	2	Intergenic	novelGene_4935	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATAAATAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	96047683	96048658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96048347_96048550
ES.6108.2	chr11	+	5470	15	NNC	ENSMUSG00000038756.14	novel	3205	15	NA	NA	-9058	0	intron_retention	FALSE	canonical	0	0	junction_11	3.28338426701749	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGAGCCTGGTCCACA	8221	False	NA	NA	False	AATAAA	-18	NA	96015553	96056277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96015697_96024568_96025735_96026310_96026430_96026550_96026682_96028382_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96044068_96045404_96045681_96047298_96047633_96049513_96049785_96055573
ES.6108.3	chr11	+	5655	12	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-9025	-7619	intron_retention	FALSE	canonical	1	3	junction_1	2.53243423221529	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATAAATAAAGTAAA	8254	False	NA	NA	False	NA	NA	NA	96015586	96048658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96015697_96024568_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96045681_96047298
ES.6108.4	chr11	+	3941	13	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-9025	-7996	intron_retention	FALSE	canonical	0	0	junction_11	2.9953667926019	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATATGGGTCTTTTGTC	8254	False	NA	NA	False	NA	NA	NA	96015586	96048281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96015697_96024568_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96044068_96045404_96045681_96047298
ES.6108.5	chr11	+	4193	15	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-5634	-1	intron_retention	FALSE	canonical	0	0	junction_1	3.44342022662684	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAATGAGCCTGGTCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	96018977	96056276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96019086_96024568_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96044068_96045404_96045681_96047298_96047633_96049513_96049785_96055644
ES.6108.6	chr11	+	3783	12	NNC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-80	-8000	intron_retention	FALSE	canonical	0	0	junction_10	2.99862227317648	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGTATATGGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	96024531	96048277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96043987_96045404_96045681_96047298
ES.6108.7	chr11	+	4719	10	NIC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	-191	-8003	intron_retention	FALSE	canonical	0	0	junction_3	3.31476308670584	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTATGTATATGGGTC	304	False	NA	NA	False	NA	NA	NA	96024853	96048274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96025735_96026310_96026430_96026550_96026682_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96045681_96047298
ES.6108.8	chr11	+	4282	11	NIC	ENSMUSG00000038756.14	novel	3485	14	NA	NA	410	-7996	intron_retention	FALSE	canonical	1	4	junction_1	2.41039415863879	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATATGGGTCTTTTGTC	905	False	NA	NA	False	NA	NA	NA	96025454	96048281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96025735_96026310_96026430_96026550_96026682_96029552_96029710_96030455_96030600_96031257_96031344_96036223_96036450_96038230_96038407_96042708_96042898_96043889_96045681_96047298
ES.6109.1	chr11	+	173	1	Intergenic	novelGene_4936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACAATAACAACACCA	NA	False	NA	NA	False	NA	NA	NA	96109614	96109787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96109600_96109800
ES.611.1	chr1	+	180	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATAATTGGT	NA	False	NA	NA	False	NA	NA	NA	62462631	62462811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_62462600_62462800
ES.6110.1	chr11	+	179	1	Intergenic	novelGene_4937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCACTTCACA	NA	False	NA	NA	False	NA	NA	NA	96119011	96119190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96119000_96119200
ES.6111.1	chr11	-	174	1	Intergenic	novelGene_4938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	96125194	96125020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96125000_96125200
ES.6112.1	chr11	-	156	1	Intergenic	novelGene_4939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	96128149	96127993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96128000_96128100
ES.6113.1	chr11	-	178	1	Intergenic	novelGene_4940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGATTCCCTGGATTG	8395	False	NA	-1	True	NA	NA	NA	96139248	96139070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96139100_96139200
ES.6114.1	chr11	+	3608	2	FSM	ENSMUSG00000083337.2_ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-2817	2466	194	539	multi-exon	FALSE	canonical	3	27	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGTGTGTGTGTGTGT	5997	False	NA	NA	False	NA	NA	NA	96139652	96153058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96142640_96152437
ES.6114.10	chr11	+	1887	5	NNC	ENSMUSG00000078706.5	novel	757	3	NA	NA	15	2429	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10.4043260233424	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGTTGTTGTATGCAG	8829	False	NA	NA	False	AAGAAA	-24	NA	96142484	96158123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96152437_96153410_96154999_96155212_96155549_96155672_96157697
ES.6114.11	chr11	+	3493	1	Intergenic	novelGene_4941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCCTTTTGGGCCCTA	NA	False	NA	8	True	AATAAA	-21	NA	96156579	96160072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96156600_96160100
ES.6114.12	chr11	+	1533	2	Genic_Genomic	ENSMUSG00000020875.10	novel	2574	2	NA	NA	-4302	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAACCTCTCCTGCGT	NA	False	NA	NA	False	AATATA	-14	NA	96157980	96167417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_96159439_96167342
ES.6114.13	chr11	+	1251	1	ISM	ENSMUSG00000020875.10	ENSMUST00000000010.9	2574	2	3884	4	3818	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAACCTCTCCTGCGT	NA	False	NA	NA	False	AATATA	-14	NA	96166166	96167417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96166200_96167400
ES.6114.2	chr11	+	2112	4	NNC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	65	5313	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	2.82842712474619	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGAGGATTGTAGGCGA	8340	False	NA	NA	False	AATAAA	-20	NA	96141995	96161007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96154999_96155212_96155549_96155672_96159873
ES.6114.3	chr11	+	1031	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-462	2688	77	317	multi-exon	FALSE	canonical	3	27	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTCTTTTAAGGATCT	8352	False	NA	NA	False	AAGAAA	-13	NA	96142007	96152836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96142640_96152437
ES.6114.4	chr11	+	1285	5	NNC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	104	4373	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	6.48074069840786	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACATGTCCTTTTGGG	8379	False	NA	3	True	AATAAA	-16	NA	96142034	96160067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96152437_96152590_96154999_96155212_96155549_96155672_96159873
ES.6114.5	chr11	+	3722	1	NIC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	117	-6750	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTCTCTCAAAAGTTA	8392	False	NA	NA	False	NA	NA	NA	96142047	96145769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96142000_96145800
ES.6114.6	chr11	+	3322	4	NNC	ENSMUSG00000078706.5	novel	757	3	NA	NA	-52	4383	intron_retention	FALSE	canonical	3	9	junction_3	7.48331477354788	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGGGCCCTAATTTA	8762	False	NA	13	True	AATAAA	-26	NA	96142417	96160077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96152437_96155212_96155549_96155672_96159873
ES.6114.7	chr11	+	1586	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-48	1719	-48	1286	multi-exon	FALSE	canonical	3	27	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCCAGGTGCTC	8766	False	NA	NA	False	AATAAA	-20	NA	96142421	96153805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96142640_96152437
ES.6114.8	chr11	+	1345	5	NNC	ENSMUSG00000078706.5	novel	757	3	NA	NA	-17	2429	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	9.17537465175128	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGTTGTTGTATGCAG	8797	False	NA	NA	False	AAGAAA	-24	NA	96142452	96158123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96152437_96152836_96154999_96155212_96155549_96155672_96157697
ES.6114.9	chr11	+	1082	5	NNC	ENSMUSG00000078706.5	novel	757	3	NA	NA	14	4373	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	7.34846922834953	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACATGTCCTTTTGGG	8828	False	NA	3	True	AATAAA	-16	NA	96142483	96160067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96142640_96152437_96152836_96154999_96155212_96155549_96155672_96159873
ES.6115.1	chr11	+	1254	1	FSM	ENSMUSG00000075588.7	ENSMUST00000182030.2	3134	1	2229	-349	1123	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAAAACGAGTGTTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	96243579	96244833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96243600_96244800
ES.6116.1	chr11	-	178	1	Intergenic	novelGene_4942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	96264228	96264050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96264000_96264200
ES.6117.1	chr11	+	181	1	Intergenic	novelGene_4943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAATCAAAACCAA	462	False	NA	NA	False	NA	NA	NA	96279855	96280036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96279900_96280000
ES.6118.1	chr11	+	167	1	Intergenic	novelGene_4944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	96391635	96391802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96391600_96391800
ES.6119.1	chr11	-	1368	2	Antisense	novelGene_ENSMUSG00000057058.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAATTGTGGTTTTTT	NA	False	NA	NA	False	TATAAA	-9	NA	96559950	96558490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_96559602_96559693
ES.612.1	chr1	+	4718	1	ISM	ENSMUSG00000052062.15	ENSMUST00000075374.10	8392	23	998743	0	998324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCAGTGTCTTGATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	62676725	62681443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_62676700_62681400
ES.6120.1	chr11	+	3882	1	Genic_Genomic	ENSMUSG00000057058.17	novel	NA	NA	NA	NA	-33062	683	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCTCAATGTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	96565998	96569880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_96566000_96569900
ES.6121.1	chr11	+	177	1	Intergenic	novelGene_4945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGGAAAAA	2162	False	NA	NA	False	NA	NA	NA	96605939	96606116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96605900_96606100
ES.6122.1	chr11	+	213	1	Intergenic	novelGene_4946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	9739	False	NA	NA	False	NA	NA	NA	96648923	96649136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96648900_96649100
ES.6123.1	chr11	-	2159	9	NNC	ENSMUSG00000020876.15	novel	2551	9	NA	NA	11	17898	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.9223097279591	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGAAGACAATCTGTC	NA	False	NA	NA	False	NA	NA	NA	96668335	96640482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96640492_96658699_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ES.6123.10	chr11	-	5953	6	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	64	junction_1	11.6550418274668	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668353	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96667888_96668280
ES.6123.11	chr11	-	2110	7	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	30.3996527757948	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668353	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96667793_96667888_96668280
ES.6123.12	chr11	-	2164	9	NNC	ENSMUSG00000020876.15	novel	2551	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.631221018985	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668353	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96660149_96661464_96661617_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ES.6123.13	chr11	-	2268	9	NNC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.8812263650535	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668344	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96660149_96660657_96660770_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ES.6123.14	chr11	-	2263	9	NNC	ENSMUSG00000020876.15	novel	2551	9	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	23.5978680181071	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668260	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668149
ES.6123.15	chr11	-	2404	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	-176	323	-148	-1	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTGTTGTTGCAATTT	NA	False	NA	-17	True	AATAAA	-12	NA	96668533	96658703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ES.6123.16	chr11	-	1369	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	18	810	-10	-810	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAAAGTTCCTATCGTT	NA	False	NA	NA	False	NA	NA	NA	96668367	96659512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ES.6123.2	chr11	-	4485	6	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	871	0	832	0	intron_retention	FALSE	canonical	3	64	junction_2	7.33212111192934	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAAAGCCCTGGCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	96667486	96658380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266
ES.6123.3	chr11	-	4615	7	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	-11	2	intron_retention	FALSE	canonical	3	64	junction_2	10.6418983268964	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	-14	True	AATAAA	-15	NA	96668329	96658700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96667888_96668280
ES.6123.4	chr11	-	5825	6	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	-3	2	intron_retention	FALSE	canonical	3	64	junction_2	11.4472704170033	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTTGCAATTTGTG	NA	False	NA	-14	True	AATAAA	-15	NA	96668321	96658700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96667888_96668280
ES.6123.6	chr11	-	3425	6	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_4	32.5699247773156	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668352	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96667793_96667888_96668280
ES.6123.7	chr11	-	2108	8	NNC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	30.6261193048265	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668353	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96660149_96661464_96661621_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ES.6123.8	chr11	-	2196	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	1	0	1	0	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668384	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ES.6123.9	chr11	-	3711	8	NIC	ENSMUSG00000020876.15	novel	2197	8	NA	NA	13	0	intron_retention	FALSE	canonical	3	53	junction_6	13.0602997121593	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668305	96658702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96667888_96668280
ES.6124.1	chr11	+	178	1	Intergenic	novelGene_4947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96668957	96669135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96669000_96669100
ES.6125.1	chr11	+	179	1	Intergenic	novelGene_4948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	96669310	96669489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96669300_96669500
ES.6126.1	chr11	+	1173	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679950	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
ES.6126.10	chr11	+	1122	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	283.082320182663	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679966	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691739_96692254_96692433_96693553_96693649_96697441_96697591_96698628
ES.6126.11	chr11	+	1194	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	271.902188295718	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTGTCTTTTTTTTTC	NA	False	NA	20	True	AATAAA	-21	NA	96679966	96698980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697621_96698628
ES.6126.12	chr11	+	1620	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	4	753	4	-753	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTAATCCTAAAACCT	NA	False	NA	92	True	NA	NA	NA	96679966	96698222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
ES.6126.14	chr11	+	2396	5	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	356.283858040187	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGATTTCTGTCTTTT	NA	False	NA	14	True	AATAAA	-15	NA	96679966	96698974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693529_96693825_96697441
ES.6126.15	chr11	+	710	5	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	1	-1465	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	232.294398339693	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCTATGAGGAAAGGC	NA	False	NA	NA	False	NA	NA	NA	96679985	96697510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691599_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.16	chr11	+	2181	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	1	-931	1	931	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTCTGAGGTGCTA	NA	False	NA	NA	False	NA	NA	NA	96679985	96700397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ES.6126.17	chr11	+	1153	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	1	97	1	3	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGAAGTAGCTTAGTC	NA	False	NA	NA	False	AATATA	-17	NA	96679985	96699369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ES.6126.18	chr11	+	1545	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	6	-753	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	320.251526147808	469	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTAATCCTAAAACCT	NA	False	NA	92	True	NA	NA	NA	96679990	96698222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96689017_96689143_96691596_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.19	chr11	+	981	5	NNC	ENSMUSG00000018666.14	novel	912	5	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_4	247.637335634189	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679993	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96698628
ES.6126.2	chr11	+	2218	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-34	486	-2	5	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTGTCTTTTTTTTTC	NA	False	NA	20	True	AATAAA	-21	NA	96679950	96698980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.21	chr11	+	1236	7	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	322.037782462452	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGTTTTATGAAGTA	NA	False	NA	NA	False	AATATA	-9	NA	96680019	96699361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96689017_96689143_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ES.6126.23	chr11	+	1120	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	302.9380134615	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGATTTCTGTCTT	NA	False	NA	12	True	AATAAA	-13	NA	96680026	96698972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693529_96693649_96697441_96697591_96698628
ES.6126.25	chr11	+	1536	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	54	-339	-36	339	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGATCCTCTGCAAG	NA	False	NA	NA	False	NA	NA	NA	96680038	96699805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ES.6126.26	chr11	+	2244	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	320.251526147808	487	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96680042	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96689017_96689143_96691596_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.27	chr11	+	939	5	FSM	ENSMUSG00000018666.14	ENSMUST00000079702.4	912	5	-32	5	-32	-5	multi-exon	FALSE	canonical	2	3	junction_4	308.662032002642	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGTTTTATGAAGTA	NA	False	NA	NA	False	AATATA	-9	NA	96680042	96699361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96699009
ES.6126.28	chr11	+	2145	5	NNC	ENSMUSG00000018666.14	novel	1824	4	NA	NA	187	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.090697524235	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTTGATTTCTGTCTT	NA	False	NA	12	True	AATAAA	-13	NA	96680261	96698972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680426_96691596_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.29	chr11	+	1803	3	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	12197	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	290.5	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96692271	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96692448_96693553_96693649_96697441
ES.6126.3	chr11	+	1347	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	289.614916742905	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679952	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441_96697591_96698628
ES.6126.4	chr11	+	1457	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-31	1244	1	-753	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTAATCCTAAAACCT	NA	False	NA	92	True	NA	NA	NA	96679953	96698222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
ES.6126.5	chr11	+	2225	5	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	303.648233981362	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679960	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693529_96693649_96697441
ES.6126.6	chr11	+	2376	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	-1	2	-1	-2	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTGATTTCTGTCTTT	NA	False	NA	13	True	AATAAA	-14	NA	96679961	96698973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
ES.6126.8	chr11	+	1470	5	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	2	-753	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	303.648233981362	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTTAATCCTAAAACCT	NA	False	NA	92	True	NA	NA	NA	96679964	96698222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693529_96693649_96697441
ES.6126.9	chr11	+	2535	4	FSM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	12	-723	2	723	multi-exon	FALSE	canonical	3	611	junction_3	65.5455736279897	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	96679964	96695518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553
ES.6127.1	chr11	+	2051	2	Intergenic	novelGene_4951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGCAGGTAGAC	NA	False	NA	NA	False	NA	NA	NA	96721023	96723286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96722911_96723122
ES.6128.1	chr11	-	3374	8	Fusion	ENSMUSG00000081249.4_ENSMUSG00000038615.18	novel	4654	5	NA	NA	23	104	multi-exon	FALSE	canonical	0	0	junction_3	567.59704735249	2075	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTTGGGCTGGTGAGA	NA	False	NA	NA	False	NA	NA	NA	96720758	96686160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_96686693_96688834_96688954_96693340_96693427_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.10	chr11	-	4900	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-4	-1349	-4	1349	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTTTTGTCAATATG	NA	False	NA	NA	False	NA	NA	NA	96714843	96706890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.100	chr11	-	2429	2	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	4	-23	intron_retention	FALSE	canonical	0	0	junction_1	0	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720777	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710576_96720644
ES.6128.101	chr11	-	3087	6	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	50	-23	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	500.897993607481	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720731	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96708757_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.102	chr11	-	3441	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-4	110	-4	75	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTATTTTTAATTTATC	NA	False	NA	-12	True	TATAAA	-15	NA	96714843	96708349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.103	chr11	-	4104	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	-12	562	-12	206	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCGAGGTCTGGTCTTG	NA	False	NA	-2	True	CATAAA	-43	NA	96720806	96708801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.104	chr11	-	3060	4	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	205	combination_of_known_splicesites	FALSE	canonical	3	68	junction_3	609.077079595751	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCGAGGTCTGGTCTT	NA	False	NA	-3	True	CATAAA	-42	NA	96720789	96708802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96712236_96712929_96713146_96720644
ES.6128.105	chr11	-	4020	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	23	203	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_3	526.057268745524	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCCCGAGGTCTGGTC	NA	False	NA	-5	True	CATAAA	-40	NA	96720758	96708804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96719050_96720644
ES.6128.106	chr11	-	3353	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	11	203	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_3	570.471345078397	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCCCGAGGTCTGGTC	NA	False	NA	-5	True	CATAAA	-40	NA	96714823	96708804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ES.6128.107	chr11	-	3816	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	23	186	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	490.449834335786	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGATTTTTCTCCTA	NA	False	NA	-22	True	CATAAA	-23	NA	96720758	96708821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718536_96718755_96719050_96720644
ES.6128.108	chr11	-	3657	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	184	intron_retention	FALSE	canonical	3	378	junction_2	472	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGGGATTTTTCTCC	NA	False	NA	-24	True	CATAAA	-21	NA	96714839	96708823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96713146_96714770
ES.6128.109	chr11	-	3221	4	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-14	180	combination_of_known_junctions	FALSE	canonical	3	62	junction_3	611.902134513537	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAACACTTGGGATTTTT	NA	False	NA	-28	True	CATAAA	-17	NA	96713565	96708827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713234
ES.6128.11	chr11	-	5734	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	38	-1118	25	1118	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCTAACAGCAAGTGC	NA	False	NA	NA	False	NA	NA	NA	96720756	96707121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.110	chr11	-	2961	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-51	164	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_3	578.474430434627	2052	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCGTGTTAACTGTGTA	NA	False	NA	-44	True	CATAAA	-1	NA	96714890	96708843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714770
ES.6128.111	chr11	-	2903	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	5	639	0	129	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAAGCTGCTAAATGT	NA	False	NA	-79	True	AGTAAA	-16	NA	96714834	96708878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.113	chr11	-	2911	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	1	127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	641.096109972773	2052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTCAAAGCTGCTAAAT	NA	False	NA	-81	True	AGTAAA	-14	NA	96714833	96708880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714759
ES.6128.114	chr11	-	3918	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	-7	743	-7	25	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTCTTAGACGTTCTT	NA	False	NA	NA	False	TATAAA	-17	NA	96720801	96708982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.115	chr11	-	3374	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	46	1234	33	-466	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTCTTGGATGCACCTG	NA	False	NA	NA	False	NA	NA	NA	96720748	96709473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.116	chr11	-	3135	4	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	40	-539	combination_of_known_splicesites	FALSE	canonical	3	71	junction_1	306.275475130913	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACACAGACATGGCGGG	NA	False	NA	NA	False	NA	NA	NA	96720741	96709546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712929_96713146_96718023_96719050_96720644
ES.6128.117	chr11	-	3029	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	-22	1647	-22	-879	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGCGGGTCAGTGCAC	NA	False	NA	0	True	AATATA	-15	NA	96720816	96709886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.118	chr11	-	2781	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	-880	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	490.449834335786	2009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACTGCGGGTCAGTGCA	NA	False	NA	-1	True	AATATA	-14	NA	96720789	96709887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718536_96718755_96719050_96720644
ES.6128.119	chr11	-	1865	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	-881	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_3	578.474430434627	2008	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGACTGCGGGTCAGTGC	NA	False	NA	-2	True	AATATA	-13	NA	96714839	96709888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714770
ES.6128.12	chr11	-	2782	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	-4	856	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	643.066481788625	2065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCTGTGTACCA	NA	False	NA	NA	False	NA	NA	NA	96714843	96707383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96714383
ES.6128.120	chr11	-	2971	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	-26	1651	-26	-883	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGACTGCGGGTCAGT	NA	False	NA	-4	True	AATATA	-11	NA	96720354	96709890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ES.6128.121	chr11	-	1995	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	267	-899	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_3	570.471345078397	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTTCTCAGATGGG	NA	False	NA	-20	True	NA	NA	NA	96714567	96709906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ES.6128.13	chr11	-	3210	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	573	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	503.198012714677	2064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGGTTGTCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	96720789	96707666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.14	chr11	-	3178	6	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	-21	573	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	589.793658833325	2064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGGTTGTCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	96720349	96707666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ES.6128.15	chr11	-	2138	5	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-32	571	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	598.773329399365	2064	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACTGGTTGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	96714871	96707668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.16	chr11	-	5180	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	36	-562	23	562	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTTTAAGAGACTGGT	NA	False	NA	NA	False	NA	NA	NA	96720758	96707677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.17	chr11	-	4852	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	-154	-44	-154	44	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGAGACTGGCCATT	NA	False	NA	38	True	NA	NA	NA	96720948	96708195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.18	chr11	-	3555	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-35	6	intron_retention	FALSE	canonical	3	133	junction_3	578.474430434627	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCTCTCCCTTCTGAA	NA	False	NA	0	True	AATAAA	-39	NA	96714874	96708233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714770
ES.6128.19	chr11	-	4027	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	22	1	intron_retention	FALSE	canonical	3	150	junction_3	570.471345078397	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCCCTCTCCCTT	NA	False	NA	-5	True	AATAAA	-34	NA	96714931	96708238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ES.6128.2	chr11	-	2657	9	Fusion	ENSMUSG00000081249.4_ENSMUSG00000038615.18	novel	3547	4	NA	NA	11	97	multi-exon	FALSE	canonical	0	0	junction_2	573.615942944406	2075	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTCACTTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	96714823	96686167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_96686693_96688834_96688954_96691542_96691632_96693340_96693424_96707917_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.20	chr11	-	3608	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	-61	0	53	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96714900	96708239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ES.6128.21	chr11	-	3618	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-52	-1	intron_retention	FALSE	canonical	2	47	junction_3	618.964906562202	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTCTCCCCCCTCTCCC	NA	False	NA	-7	True	AATAAA	-32	NA	96713603	96708240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713462
ES.6128.23	chr11	-	3410	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	71	junction_1	153.5	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTCTCCCCCCTCTCC	NA	False	NA	-8	True	AATAAA	-31	NA	96714863	96708241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712929_96713146_96714770
ES.6128.24	chr11	-	4658	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	-41	-4	intron_retention	FALSE	canonical	3	94	junction_3	526.057268745524	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	-10	True	AATAAA	-29	NA	96720835	96708243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96719050_96720644
ES.6128.25	chr11	-	4394	4	NIC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	38	-4	intron_retention	FALSE	canonical	3	71	junction_1	308.787233472428	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	-10	True	AATAAA	-29	NA	96720289	96708243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712929_96713146_96718023_96719050_96720236
ES.6128.26	chr11	-	3519	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	11	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	589.085732300486	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	-10	True	AATAAA	-29	NA	96714823	96708243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711335_96712076_96712236_96712929_96713146_96714770
ES.6128.27	chr11	-	4429	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	1	-4	intron_retention	FALSE	canonical	3	44	junction_4	490.449834335786	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCACTTTCTCCCCCCTCT	NA	False	NA	-10	True	AATAAA	-29	NA	96720793	96708243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718536_96718755_96719050_96720644
ES.6128.28	chr11	-	3929	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-33	-5	intron_retention	FALSE	canonical	2	46	junction_3	619.435764762309	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCACTTTCTCCCCCCTC	NA	False	NA	-11	True	AATAAA	-28	NA	96714872	96708244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714383
ES.6128.29	chr11	-	4599	3	ISM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	567	6	562	-6	3prime_fragment	FALSE	canonical	3	1322	junction_1	36.5	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96714272	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96711343_96712076_96712236_96712929
ES.6128.3	chr11	-	158	1	Intergenic	novelGene_4949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	96690535	96690377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96690400_96690500
ES.6128.30	chr11	-	4239	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	31	-6	intron_retention	FALSE	canonical	3	378	junction_2	508.5	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96714803	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96712236_96712929_96713146_96714770
ES.6128.31	chr11	-	4361	6	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	8	-6	intron_retention	FALSE	canonical	3	44	junction_4	580.655836102592	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96720319	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718536_96718755_96719050_96720236
ES.6128.32	chr11	-	4612	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	-22	6	-22	-6	multi-exon	FALSE	canonical	3	79	junction_4	530.254891538023	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96720350	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ES.6128.33	chr11	-	3855	4	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-66	-6	intron_retention	FALSE	canonical	3	62	junction_3	611.902134513537	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96713617	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713234
ES.6128.34	chr11	-	4151	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	4	-6	intron_retention	FALSE	canonical	0	0	junction_4	504.843975897504	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96720790	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718536_96719028_96719050_96720644
ES.6128.35	chr11	-	4830	5	NNC	ENSMUSG00000038615.18	novel	3869	5	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_4	560.391994500278	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	False	NA	-12	True	AATAAA	-27	NA	96720781	96708245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720449
ES.6128.36	chr11	-	4487	4	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	1	-7	intron_retention	FALSE	canonical	3	71	junction_1	306.275475130913	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCACTTTCTCCCCCC	NA	False	NA	-13	True	AATAAA	-26	NA	96720793	96708246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712929_96713146_96718023_96719050_96720644
ES.6128.37	chr11	-	3783	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-3	-7	intron_retention	FALSE	canonical	1	1	junction_3	640.625215447118	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCACTTTCTCCCCCC	NA	False	NA	-13	True	AATAAA	-26	NA	96713554	96708246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713242
ES.6128.38	chr11	-	3562	4	FSM	ENSMUSG00000038615.18	ENSMUST00000169828.8	3530	4	-39	7	-39	-7	multi-exon	FALSE	canonical	3	60	junction_3	612.843826399153	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCACTTTCTCCCCCC	NA	False	NA	-13	True	AATAAA	-26	NA	96714992	96708246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714901
ES.6128.39	chr11	-	3797	3	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-30	-8	intron_retention	FALSE	canonical	3	71	junction_1	39.5	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96714869	96708247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712929_96713146_96714383
ES.6128.4	chr11	-	2936	2	Intergenic	novelGene_4950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGATGCCTTCTGACTTA	5876	False	NA	0	True	NA	NA	NA	96707540	96701171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96701501_96704933
ES.6128.40	chr11	-	3423	3	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	25	-8	intron_retention	FALSE	canonical	3	68	junction_2	1.5	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96720756	96708247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712929_96713146_96720644
ES.6128.41	chr11	-	2883	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	12	-8	intron_retention	TRUE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96720769	96708247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710864_96718907_96719050_96720644
ES.6128.44	chr11	-	6912	3	NIC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	10	-8	intron_retention	FALSE	canonical	3	730	junction_2	296	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGCACTTTCTCCCCC	NA	False	NA	-14	True	AATAAA	-25	NA	96720771	96708247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96713146_96718023
ES.6128.47	chr11	-	4361	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	16	6	intron_retention	FALSE	canonical	3	44	junction_4	577.361377301946	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAGTGCACTTTCTCC	NA	False	NA	-17	True	AATAAA	-22	NA	96720765	96708250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96718536_96718755_96719050_96720644
ES.6128.48	chr11	-	3329	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-4	4	intron_retention	FALSE	non_canonical	0	0	junction_2	555.948039138751	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTAAGTGCACTTTCT	NA	False	NA	-19	True	AATAAA	-20	NA	96714843	96708252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712229_96713131_96713146_96714770
ES.6128.49	chr11	-	4444	4	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	4	intron_retention	FALSE	canonical	3	71	junction_1	296.426494542351	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTAAGTGCACTTTCT	NA	False	NA	-19	True	AATAAA	-20	NA	96720789	96708252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712929_96713113_96718023_96719050_96720644
ES.6128.5	chr11	-	5548	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	32	3977	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	661.878576477589	2065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTTATGGCTGGAGG	NA	False	NA	NA	False	NA	NA	NA	96720749	96704262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96720644
ES.6128.50	chr11	-	3607	4	NIC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	4	0	intron_retention	FALSE	canonical	3	68	junction_3	609.077079595751	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720790	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96712236_96712929_96713146_96720644
ES.6128.51	chr11	-	4501	5	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_4	560.391994500278	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720766	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719017_96720719
ES.6128.52	chr11	-	4318	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_1	493.386765124481	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720766	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711052_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.53	chr11	-	4552	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	65	0	intron_retention	FALSE	canonical	0	0	junction_2	468.391596316586	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720716	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712229_96712929_96713146_96718023_96719050_96720644
ES.6128.54	chr11	-	3516	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-296	0	intron_retention	FALSE	canonical	0	0	junction_3	641.096109972773	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96713847	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713792
ES.6128.55	chr11	-	2869	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720789	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710911_96718979_96719050_96720644
ES.6128.57	chr11	-	3507	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_3	641.096109972773	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714823	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713139_96714770
ES.6128.58	chr11	-	3400	3	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	-9	0	intron_retention	FALSE	canonical	2	47	junction_2	12	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96713560	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712929_96713146_96713462
ES.6128.59	chr11	-	3776	5	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_4	644.45456589274	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714867	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383_96714602_96714770
ES.6128.6	chr11	-	5316	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	-20	2439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	504.843975897504	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATGAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	96720814	96705800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710005_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.60	chr11	-	3291	4	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	217	0	intron_retention	FALSE	canonical	0	0	junction_1	625.259945942486	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714617	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711052_96712189_96712236_96712929_96713146_96714383
ES.6128.61	chr11	-	4062	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	25	0	intron_retention	FALSE	non_canonical	0	0	junction_4	504.843975897504	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720756	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718420_96718956_96719050_96720644
ES.6128.62	chr11	-	4063	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	4	0	intron_retention	FALSE	non_canonical	0	0	junction_3	561.567894381436	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720790	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713129_96718576_96719050_96720644
ES.6128.63	chr11	-	4526	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	33	0	intron_retention	FALSE	non_canonical	0	0	junction_1	504.843975897504	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720748	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710434_96710498_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.64	chr11	-	3227	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720789	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711247_96718957_96719050_96720644
ES.6128.65	chr11	-	3783	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	561.567894381436	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720783	96708256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718866_96719050_96720644
ES.6128.66	chr11	-	3937	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	504.843975897504	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCAGCTTAAGTGCAC	NA	False	NA	-24	True	AATAAA	-15	NA	96720753	96708257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96709953_96710610_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.67	chr11	-	3496	4	NNC	ENSMUSG00000038615.18	novel	3530	4	NA	NA	-17	-1	intron_retention	FALSE	canonical	1	16	junction_3	633.561888584428	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTCAGCTTAAGTGCAC	NA	False	NA	-24	True	AATAAA	-15	NA	96714970	96708257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96714901
ES.6128.68	chr11	-	3000	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	-22	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96720816	96708258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710804_96718766_96719050_96720644
ES.6128.69	chr11	-	3822	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	-4	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	644.45456589274	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96714843	96708258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383_96714723_96714819
ES.6128.7	chr11	-	4065	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	-37	2106	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	643.066481788625	2065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGATTTATTTATGTAT	NA	False	NA	NA	False	NA	NA	NA	96714876	96706133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96714383
ES.6128.70	chr11	-	3529	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	25	junction_3	629.323975919134	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96713565	96708258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96713462
ES.6128.72	chr11	-	3515	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	641.096109972773	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96714833	96708258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714777
ES.6128.73	chr11	-	3802	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	42	-2	intron_retention	FALSE	canonical	1	20	junction_3	655.340751060088	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCAGCTTAAGTGCA	NA	False	NA	-25	True	AATAAA	-14	NA	96720285	96708258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718755_96719050_96720236
ES.6128.75	chr11	-	4557	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	11	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	560.391994500278	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATTCAGCTTAAGTGC	NA	False	NA	-26	True	AATAAA	-13	NA	96720316	96708259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720243
ES.6128.76	chr11	-	4528	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	23	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	504.843975897504	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGATTCAGCTTAAGTG	NA	False	NA	-27	True	AATAAA	-12	NA	96720758	96708260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708300_96708368_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.77	chr11	-	3334	3	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	-4	intron_retention	FALSE	canonical	3	71	junction_1	31	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGATTCAGCTTAAGTG	NA	False	NA	-27	True	AATAAA	-12	NA	96714839	96708260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712929_96713113_96714770
ES.6128.79	chr11	-	4607	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	10	-4	intron_retention	FALSE	canonical	0	0	junction_3	561.567894381436	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGATTCAGCTTAAGTG	NA	False	NA	-27	True	AATAAA	-12	NA	96720771	96708260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713139_96718019_96719050_96720644
ES.6128.8	chr11	-	3675	1	Genic_Genomic	ENSMUSG00000038615.18	novel	NA	NA	NA	NA	3735	2098	mono-exon	FALSE	NA	NA	NA	NA	NA	2051	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCCCAGCAAGATTTAT	3600	False	NA	NA	False	NA	NA	NA	96709816	96706141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_96706100_96709800
ES.6128.80	chr11	-	6219	4	FSM	ENSMUSG00000038615.18	ENSMUST00000107658.8	4219	4	-2005	5	-5	-5	multi-exon	FALSE	canonical	3	730	junction_3	297.772844071898	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATGATTCAGCTTAAGT	NA	False	NA	-28	True	AATAAA	-11	NA	96720786	96708261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023
ES.6128.81	chr11	-	2764	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	-23	intron_retention	TRUE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720789	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710746_96718896_96719050_96720644
ES.6128.82	chr11	-	2990	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	0	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720794	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710843_96718772_96719050_96720644
ES.6128.83	chr11	-	2524	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	-23	intron_retention	FALSE	canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720789	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710638_96719028_96719050_96720644
ES.6128.84	chr11	-	4920	2	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	10	-23	intron_retention	FALSE	canonical	3	378	junction_1	0	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96714824	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96713146_96714770
ES.6128.85	chr11	-	4512	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	10	-23	intron_retention	FALSE	canonical	3	79	junction_4	636.545560034786	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720317	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96719050_96720236
ES.6128.86	chr11	-	3076	6	NIC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	15	-23	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	588.133522254938	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720312	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96708757_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ES.6128.87	chr11	-	4530	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	-1642	-23	intron_retention	FALSE	canonical	1	3	junction_4	559.238991845168	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96722436	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96722370
ES.6128.88	chr11	-	4370	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	20	-23	intron_retention	FALSE	non_canonical	0	0	junction_4	504.843975897504	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720761	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96718733_96718943_96719050_96720644
ES.6128.89	chr11	-	2751	2	NNC	ENSMUSG00000038615.18	novel	4219	4	NA	NA	5	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720789	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710955_96720713
ES.6128.9	chr11	-	4387	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	16	1774	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	503.198012714677	2065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTATTTGTTTTTTTGT	NA	False	NA	NA	False	TTTAAA	-4	NA	96720765	96706465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708209_96710220_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.90	chr11	-	3223	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	5	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720789	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711010_96718701_96719050_96720644
ES.6128.91	chr11	-	4234	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-33	-23	intron_retention	FALSE	canonical	3	378	junction_2	472	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96714872	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96711343_96712076_96713146_96714770
ES.6128.92	chr11	-	4405	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	40	-23	intron_retention	FALSE	non_canonical	0	0	junction_3	561.567894381436	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720741	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713118_96718151_96719050_96720644
ES.6128.93	chr11	-	3518	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	88	-23	intron_retention	FALSE	non_canonical	0	0	junction_3	641.096109972773	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96713463	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713383
ES.6128.94	chr11	-	3369	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	43	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	504.843975897504	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720738	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96709834_96711022_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.96	chr11	-	3636	5	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	-2	-23	intron_retention	FALSE	canonical	1	4	junction_4	643.343755312819	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96714836	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383_96714516_96714770
ES.6128.98	chr11	-	4519	6	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	1	-23	intron_retention	FALSE	canonical	0	0	junction_1	504.843975897504	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720793	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96708311_96708404_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ES.6128.99	chr11	-	3482	3	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	3	-23	intron_retention	FALSE	non_canonical	0	0	junction_1	355.5	2063	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATCAAATAAAAT	NA	False	NA	-46	True	AAGAAA	-18	NA	96720791	96708279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96710671_96718105_96719050_96720644
ES.6129.1	chr11	-	161	1	Intergenic	novelGene_4952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	96723128	96722967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96723000_96723100
ES.613.1	chr1	+	6027	18	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	5.43664358088753	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTTCCTACATTGT	4024	False	NA	NA	False	AATAAA	-12	NA	62742459	62857846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856815
ES.613.10	chr1	+	5510	19	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	-138	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	5.97448277631164	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	4287	False	NA	NA	False	AATAAA	-14	NA	62742722	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62855776_62856120_62856175_62856793
ES.613.12	chr1	+	5457	15	ISM	ENSMUSG00000025969.16	ENSMUST00000063594.13	6342	17	34708	10	34708	-10	3prime_fragment	FALSE	canonical	3	7	junction_6	4.01527694930148	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATTTTTCCTACATT	6636	False	NA	NA	False	AATAAA	-10	NA	62777568	62857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491
ES.613.14	chr1	+	4693	15	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	34715	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	6.07310901114285	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATTTTTCCTACATT	6643	False	NA	NA	False	AATAAA	-10	NA	62777575	62857844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62854491_62856108_62856813
ES.613.17	chr1	+	5293	15	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	39872	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	5.37188447913233	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	4656	False	NA	NA	False	AATAAA	-14	NA	62782732	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856815
ES.613.2	chr1	+	4326	15	NNC	ENSMUSG00000025969.16	novel	4216	16	NA	NA	21	-275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	5.67711122286103	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTAGCTCTGGCTGGGT	4029	False	NA	NA	False	NA	NA	NA	62742464	62835865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824326_62834867
ES.613.20	chr1	+	2728	11	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	45308	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.82934843158555	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62788168	62836132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62788197_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62834867
ES.613.21	chr1	+	4239	12	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	45326	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	5.95159538303015	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATTTTTCCTACATTG	NA	False	NA	NA	False	AATAAA	-11	NA	62788186	62857845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856813
ES.613.22	chr1	+	4294	9	ISM	ENSMUSG00000025969.16	ENSMUST00000114157.3	6357	17	59252	6	59252	-6	3prime_fragment	FALSE	canonical	0	0	junction_7	6.51440711039769	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	3707	False	NA	NA	False	AATAAA	-14	NA	62802112	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825476_62851692_62851744_62854491
ES.613.23	chr1	+	3399	9	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	64164	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.80124188831496	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTACATTGTCTTTC	8619	False	NA	NA	False	AATAAA	-17	NA	62807024	62857851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62807082_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856815
ES.613.24	chr1	+	6946	2	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	64216	-21079	intron_retention	FALSE	canonical	0	0	junction_1	0	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAGGGGGAAAAA	8671	False	NA	NA	False	NA	NA	NA	62807076	62815061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62807120_62808158
ES.613.25	chr1	+	3497	9	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	65043	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.80124188831496	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCCTACATTGTCTT	9498	False	NA	NA	False	AATAAA	-15	NA	62807903	62857849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62808065_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856819
ES.613.26	chr1	+	3374	8	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	65271	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6.82133507789333	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTTCCTACATTGT	9726	False	NA	NA	False	AATAAA	-12	NA	62808131	62857846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856805
ES.613.28	chr1	+	3377	8	NNC	ENSMUSG00000025969.16	novel	6708	16	NA	NA	67554	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	7.94624799152765	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCCTACATTGTCTTT	286	False	NA	NA	False	AATAAA	-16	NA	62810414	62857850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62810558_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856805
ES.613.29	chr1	+	3248	7	NNC	ENSMUSG00000025969.16	novel	6357	17	NA	NA	68002	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.99382504215469	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	734	False	NA	NA	False	AATAAA	-14	NA	62810862	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62811005_62822452_62822716_62824203_62824301_62825439_62825476_62851692_62851744_62854491_62856108_62856805
ES.613.3	chr1	+	6007	18	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	5.43664358088753	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	4040	False	NA	NA	False	AATAAA	-14	NA	62742475	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62856108_62856821
ES.613.4	chr1	+	5784	18	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	77	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	5.43664358088753	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATTTTTCCTACATTG	4085	False	NA	NA	False	AATAAA	-11	NA	62742520	62857845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62855911_62856799
ES.613.5	chr1	+	3609	16	FSM	ENSMUSG00000025969.16	ENSMUST00000114155.8	6534	16	-335	3260	82	-927	multi-exon	FALSE	canonical	2	3	junction_2	5.28898225874632	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCACTTTTTTTCTCC	4090	False	NA	NA	False	AAGAAA	-22	NA	62742525	62835213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62834867
ES.613.6	chr1	+	6848	16	FSM	ENSMUSG00000025969.16	ENSMUST00000114155.8	6534	16	-314	0	103	0	multi-exon	FALSE	canonical	2	3	junction_2	5.28898225874632	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGGGTTTTTTTCCCTG	4111	False	NA	NA	False	AATAAA	-22	NA	62742546	62838473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62834867
ES.613.7	chr1	+	5739	18	NNC	ENSMUSG00000025969.16	novel	6342	17	NA	NA	109	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	5.43664358088753	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTCCTACATTGTCT	4117	False	NA	NA	False	AATAAA	-14	NA	62742552	62857848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62851692_62851744_62854491_62855911_62856815
ES.613.8	chr1	+	3279	15	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	-308	10637	109	-10637	5prime_fragment	FALSE	canonical	2	3	junction_2	4.95695759225642	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTTCTCTTTCCATG	4117	False	NA	NA	False	AAAAAG	-16	NA	62742552	62825503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439
ES.6130.1	chr11	+	177	1	Intergenic	novelGene_4953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGAAAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	96733437	96733614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96733400_96733600
ES.6131.2	chr11	+	930	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	-3	3	3	-3	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTCCTTTCTTGACT	772	False	NA	8	True	AATAAA	-19	NA	96740698	96752026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ES.6131.4	chr11	+	910	9	NNC	ENSMUSG00000018672.16	novel	930	9	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	75.591728218106	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGACCTCCTTTCTTGAC	779	False	NA	7	True	AATAAA	-18	NA	96740705	96752025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747538_96748378_96748418_96751688
ES.6131.5	chr11	+	1885	7	NIC	ENSMUSG00000018672.16	novel	930	9	NA	NA	12	-3	intron_retention	FALSE	canonical	3	213	junction_6	12.8636006709716	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTCCTTTCTTGACT	792	False	NA	8	True	AATAAA	-19	NA	96740718	96752026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96740823_96741498_96741568_96744260_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ES.6131.6	chr11	+	176	1	Intergenic	novelGene_4954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATGACTCCAGGG	699	False	NA	NA	False	NA	NA	NA	96747789	96747965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96747800_96748000
ES.6132.1	chr11	-	175	1	Intergenic	novelGene_4955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAATGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	96749862	96749687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96749700_96749900
ES.6133.1	chr11	-	168	1	Intergenic	novelGene_4956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAATTAAAATAAA	3926	False	NA	NA	False	NA	NA	NA	96785072	96784904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96784900_96785100
ES.6134.1	chr11	+	181	1	Intergenic	novelGene_4957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTAGCATCATATA	7745	False	NA	NA	False	NA	NA	NA	96785597	96785778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96785600_96785800
ES.6135.1	chr11	+	177	1	Intergenic	novelGene_4958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTTACATTATATAT	226	False	NA	NA	False	NA	NA	NA	96789470	96789647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96789500_96789600
ES.6136.1	chr11	+	2273	2	Intergenic	novelGene_4959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGCTGTCTCCCAGTGTT	4268	False	NA	NA	False	NA	NA	NA	96793512	96796118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96795484_96795816
ES.6137.1	chr11	-	2442	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	95	-287	-9	287	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTATTCCTGCTGCTT	NA	False	NA	NA	False	AATGAA	-16	NA	96807227	96797964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.10	chr11	-	2786	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-17	51	intron_retention	FALSE	canonical	3	831	junction_10	111.76385820112	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807339	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.11	chr11	-	1956	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	-45	339	-45	51	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807367	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.13	chr11	-	2533	13	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	4	51	intron_retention	FALSE	canonical	0	0	junction_11	413.125552613515	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807236	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806541_96806604_96806876_96807023_96807209
ES.6137.14	chr11	-	1780	13	FSM	ENSMUSG00000018669.15	ENSMUST00000134732.8	2201	13	82	339	0	51	multi-exon	FALSE	canonical	3	10	junction_9	315.392733570209	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807240	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.16	chr11	-	1950	14	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	2	51	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	306.441978832099	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807320	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803263_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.17	chr11	-	2482	10	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	9	51	intron_retention	FALSE	canonical	3	10	junction_7	359.532412385247	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807209	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976
ES.6137.18	chr11	-	6333	6	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-8	51	intron_retention	FALSE	canonical	3	1008	junction_5	72.8411971345886	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807226	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042
ES.6137.19	chr11	-	1826	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-3	51	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	292.613200671297	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807258	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799725_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.2	chr11	-	3117	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	4	13	intron_retention	FALSE	canonical	3	831	junction_10	111.76385820112	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTGCCTGTCCACTTC	NA	False	NA	0	True	GATAAA	-29	NA	96807318	96798238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.20	chr11	-	5650	9	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	1	51	intron_retention	FALSE	canonical	3	831	junction_8	118.656015439589	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807239	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96807023_96807209
ES.6137.22	chr11	-	3655	8	NNC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	5	51	intron_retention	FALSE	non_canonical	0	0	junction_5	399.819040699818	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807213	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801904_96802836_96803042_96804623_96806976
ES.6137.23	chr11	-	2241	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	51	intron_retention	FALSE	canonical	3	18	junction_11	304.788211987712	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807240	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
ES.6137.24	chr11	-	3875	8	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-16	51	intron_retention	FALSE	canonical	3	831	junction_7	120.535539682413	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807338	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96802008_96802377_96802836_96803042_96804623_96806976_96807023_96807209
ES.6137.25	chr11	-	2124	13	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-92	51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	311.28982342291	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807025	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806653
ES.6137.26	chr11	-	2473	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-16	51	intron_retention	FALSE	canonical	3	831	junction_11	110.238659205703	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807338	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.28	chr11	-	2256	11	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	1	51	intron_retention	FALSE	canonical	3	10	junction_7	341.67295766566	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807239	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802523_96802698_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.29	chr11	-	3416	10	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-4	51	intron_retention	FALSE	canonical	3	18	junction_8	349.770083213403	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGCACATGTTTTCT	NA	False	NA	-8	True	NA	NA	NA	96807259	96798590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
ES.6137.30	chr11	-	2637	10	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-92	50	intron_retention	FALSE	canonical	3	37	junction_2	341.202123218612	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGTGCACATGTTTTC	NA	False	NA	-9	True	NA	NA	NA	96807025	96798591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799725_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
ES.6137.31	chr11	-	2598	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-7	49	intron_retention	FALSE	canonical	3	831	junction_11	113.986442575023	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGCACATGTTTT	NA	False	NA	8	True	NA	NA	NA	96807225	96798592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.32	chr11	-	2003	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	49	intron_retention	FALSE	canonical	3	831	junction_12	109.66473529201	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGCACATGTTTT	NA	False	NA	8	True	NA	NA	NA	96807240	96798592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.33	chr11	-	5047	10	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	7	49	intron_retention	FALSE	canonical	3	831	junction_9	112.203298734545	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTGTGCACATGTTTT	NA	False	NA	8	True	NA	NA	NA	96807248	96798592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96807023_96807209
ES.6137.34	chr11	-	2030	14	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-44	45	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	301.956832997836	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAAGCTGTGCACATG	NA	False	NA	4	True	NA	NA	NA	96807366	96798596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804704_96806976_96807023_96807209
ES.6137.38	chr11	-	5866	8	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	33	35	intron_retention	FALSE	canonical	3	831	junction_7	108.287222002319	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCTTGAAGTTGAAGC	NA	False	NA	-6	True	NA	NA	NA	96807289	96798606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96807023_96807209
ES.6137.4	chr11	-	2312	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	299.949482926196	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTCACCTTTACTG	NA	False	NA	-16	True	GATAAA	-13	NA	96807237	96798254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806826_96807023_96807209
ES.6137.40	chr11	-	1913	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	1	29	intron_retention	FALSE	canonical	3	831	junction_12	108.139923504484	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGAGCCTGCTTGAAGT	NA	False	NA	-12	True	AATAAA	-44	NA	96807239	96798612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.43	chr11	-	1565	12	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-8	29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	332.077582292387	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGAGCCTGCTTGAAGT	NA	False	NA	-12	True	AATAAA	-44	NA	96807226	96798612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.45	chr11	-	1897	13	NNC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	11	29	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	408.68811118287	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGAGCCTGCTTGAAGT	NA	False	NA	-12	True	AATAAA	-44	NA	96807229	96798612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806826_96807023_96807209
ES.6137.46	chr11	-	2783	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-21	29	intron_retention	FALSE	canonical	3	831	junction_10	115.618510628705	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGAGCCTGCTTGAAGT	NA	False	NA	-12	True	AATAAA	-44	NA	96807343	96798612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.47	chr11	-	3286	10	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	0	25	intron_retention	FALSE	canonical	3	831	junction_9	120.86090362351	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGCTGAGCCTGCTTG	NA	False	NA	-16	True	AATAAA	-40	NA	96807240	96798616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.49	chr11	-	3018	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	1	3	intron_retention	FALSE	canonical	3	831	junction_10	114.663682131702	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTGGCAGTCACTTGC	NA	False	NA	-38	True	AATAAA	-18	NA	96807321	96798638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.5	chr11	-	2216	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	31	3	31	-3	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGTCACCTTTACTG	NA	False	NA	-16	True	GATAAA	-13	NA	96807291	96798254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.50	chr11	-	2054	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	18	junction_11	309.596062995352	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGGCTGGCAGTCACTT	NA	False	NA	-40	True	AATAAA	-16	NA	96807239	96798640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
ES.6137.51	chr11	-	2996	11	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-23	0	intron_retention	FALSE	canonical	3	831	junction_10	119.527444547267	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807345	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.53	chr11	-	1823	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	10	0	intron_retention	FALSE	canonical	3	26	junction_11	309.236837209934	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807230	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96806976
ES.6137.54	chr11	-	2370	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-5	0	intron_retention	FALSE	canonical	1	1	junction_7	332.746099815082	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807245	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803263_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.55	chr11	-	2453	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	982	junction_5	83.661759484247	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976
ES.6137.56	chr11	-	2528	10	NNC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-23	0	intron_retention	FALSE	canonical	2	9	junction_2	449.833549462712	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807345	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799194_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96804207_96804623_96806976_96807023_96807209
ES.6137.57	chr11	-	3913	8	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	831	junction_7	130.488876686005	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807239	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96802836_96803042_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.58	chr11	-	2061	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	392.635895895373	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807326	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799194_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804704_96806826_96807023_96807209
ES.6137.59	chr11	-	1761	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	405.676919868027	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807235	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802515_96802698_96802832_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.6	chr11	-	5059	9	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	494	-5	intron_retention	FALSE	canonical	3	1008	junction_6	79.4638282490845	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAGTTGTCACCTTTAC	NA	False	NA	-18	True	GATAAA	-11	NA	96806439	96798256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490
ES.6137.60	chr11	-	1740	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	300.397980595014	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807236	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799194_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.62	chr11	-	4620	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_10	109.630333393637	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807240	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96807023_96807209
ES.6137.63	chr11	-	4673	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	5	0	intron_retention	FALSE	canonical	3	831	junction_10	111.403949660683	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807235	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96807023_96807209
ES.6137.65	chr11	-	2000	14	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	297.943861119336	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807362	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
ES.6137.67	chr11	-	3338	9	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	831	junction_8	122.101840178598	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807225	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.68	chr11	-	1956	12	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	31	0	intron_retention	FALSE	canonical	3	10	junction_8	328.926101374289	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807291	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.69	chr11	-	3568	9	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	5	0	intron_retention	FALSE	canonical	3	831	junction_8	124.21956367658	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807235	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.7	chr11	-	1897	15	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	2	59	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	382.031679421527	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTTTCTTAATTCTT	NA	False	NA	0	True	NA	NA	NA	96807238	96798582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806541_96806604_96806976_96807023_96807209
ES.6137.70	chr11	-	2506	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	6	0	intron_retention	FALSE	canonical	1	2	junction_10	334.596413608993	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807212	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804704_96806976
ES.6137.71	chr11	-	2522	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-16	0	intron_retention	FALSE	canonical	3	18	junction_10	323.362115671022	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807338	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
ES.6137.72	chr11	-	2200	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-28	0	intron_retention	FALSE	canonical	3	831	junction_12	105.792905664269	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807350	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.74	chr11	-	3244	10	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	831	junction_9	117.135987237795	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807238	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.75	chr11	-	5738	8	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	1	0	intron_retention	FALSE	canonical	3	831	junction_7	108.983428809622	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807239	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96807023_96807209
ES.6137.76	chr11	-	3103	10	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	20	0	intron_retention	FALSE	canonical	3	831	junction_9	119.487899072213	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807302	96798641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ES.6137.77	chr11	-	2271	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	400.610569509052	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCGTGGCTGGCAGTCA	NA	False	NA	-43	True	AATAAA	-13	NA	96807320	96798643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806475_96806604_96806876
ES.6137.79	chr11	-	1763	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	397.666492243506	750	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCGTGGCTGGCAGTCA	NA	False	NA	-43	True	AATAAA	-13	NA	96807239	96798643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804497_96804623_96806976_96807023_96807214
ES.6137.8	chr11	-	4108	6	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-6	53	intron_retention	FALSE	canonical	3	1008	junction_4	80.2281746021932	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCACATGTTTTCTTA	NA	False	NA	-6	True	NA	NA	NA	96807246	96798588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96804623_96806976
ES.6137.80	chr11	-	3957	7	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1008	junction_5	71.4455892425993	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCGTGGCTGGCAGTCA	NA	False	NA	-43	True	AATAAA	-13	NA	96807228	96798643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96802836_96803042_96804623_96806976
ES.6137.81	chr11	-	2740	9	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	8	-4	intron_retention	FALSE	canonical	3	10	junction_6	375.608818287058	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTCGTGGCTGGCAGT	NA	False	NA	-45	True	AATAAA	-11	NA	96807210	96798645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976
ES.6137.82	chr11	-	1894	1	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	-7	-1821	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	705	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAGACG	NA	False	NA	NA	False	NA	NA	NA	96807225	96805331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96805300_96807200
ES.6137.83	chr11	-	1714	2	ISM	ENSMUSG00000018669.15	ENSMUST00000130774.2	488	6	0	2166	0	-1829	5prime_fragment	FALSE	canonical	3	831	junction_1	0	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96807240	96805339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96807023_96807209
ES.6138.1	chr11	+	187	1	Antisense	novelGene_ENSMUSG00000085307.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	5053	False	NA	NA	False	NA	NA	NA	96812850	96813037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_96812800_96813000
ES.6139.1	chr11	+	3606	3	FSM	ENSMUSG00000047040.10	ENSMUST00000107636.4	3545	3	-61	0	-39	0	multi-exon	FALSE	canonical	1	1	junction_2	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGGCTGACAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	96820088	96828656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96820336_96822336_96822380_96825340
ES.6139.2	chr11	+	1361	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	-117	-2	-25	2	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACGGTCTTATTTATA	NA	False	NA	NA	False	AATAAA	-12	NA	96820102	96826471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96820336_96825343
ES.614.1	chr1	-	2428	2	Antisense	novelGene_ENSMUSG00000025969.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCTCACCCCCTCTCC	NA	False	NA	NA	False	AATAAA	-22	NA	62775106	62766643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_62768950_62774984
ES.6140.1	chr11	-	868	1	Antisense	novelGene_ENSMUSG00000047040.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGACAACCCTACTC	4044	False	NA	NA	False	NA	NA	NA	96825921	96825053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_96825100_96825900
ES.6141.1	chr11	-	2026	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	-25	-7	-25	7	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTCCATTTTGTCT	NA	False	NA	5	True	AATAAA	-32	NA	96834837	96828643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ES.6141.2	chr11	-	2812	6	FSM	ENSMUSG00000018659.13	ENSMUST00000153896.2	2573	6	-239	0	-32	0	multi-exon	FALSE	canonical	3	182	junction_1	9.70360757656656	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACTTGATTCCAT	NA	False	NA	-2	True	AATAAA	-25	NA	96834844	96828650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96831782_96833235_96833361_96834556
ES.6141.3	chr11	-	4540	3	NIC	ENSMUSG00000018659.13	novel	2573	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	182	junction_1	5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACTTGATTCCAT	NA	False	NA	-2	True	AATAAA	-25	NA	96834815	96828650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96829910_96830080_96831782_96833235
ES.6141.4	chr11	-	3170	6	ISM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	18	2	-10	-2	intron_retention	FALSE	canonical	3	181	junction_4	11.4297856497836	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTAACTTGATTCC	NA	False	NA	-4	True	AATAAA	-23	NA	96834794	96828652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235
ES.6141.5	chr11	-	2322	6	NIC	ENSMUSG00000018659.13	novel	1994	7	NA	NA	-11	-5	intron_retention	FALSE	canonical	3	181	junction_3	7.46726188103779	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAATGTTTAACTTGAT	NA	False	NA	-7	True	AATAAA	-20	NA	96834823	96828655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96829910_96830080_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ES.6141.6	chr11	-	3701	4	NIC	ENSMUSG00000018659.13	novel	1994	7	NA	NA	-23	-5	intron_retention	FALSE	canonical	3	181	junction_2	8.17856276425687	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAATGTTTAACTTGAT	NA	False	NA	-7	True	AATAAA	-20	NA	96834835	96828655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96830603_96830841_96830896_96831681_96831782_96833235
ES.6141.7	chr11	-	3293	4	NIC	ENSMUSG00000018659.13	novel	2573	6	NA	NA	-29	-9	intron_retention	FALSE	canonical	3	192	junction_2	4.02768199119819	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATTAATGTTTAACT	NA	False	NA	-11	True	AATAAA	-16	NA	96834841	96828659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96830603_96830841_96831782_96833235_96833361_96834556
ES.6141.8	chr11	-	4701	2	NIC	ENSMUSG00000018659.13	novel	2573	6	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	192	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATTAATGTTTAACT	NA	False	NA	-11	True	AATAAA	-16	NA	96834814	96828659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96831782_96833235
ES.6142.1	chr11	+	3944	6	FSM	ENSMUSG00000078700.11	ENSMUST00000135825.9	2801	6	-8	-1135	-8	1135	multi-exon	TRUE	canonical	1	2	junction_3	5.35163526410386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACTAAAAAATACAA	4779	False	NA	NA	False	NA	NA	NA	96834982	96857021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96835041_96835670_96835920_96843406_96843555_96850379_96851108_96851686_96851823_96854396
ES.6142.2	chr11	+	2908	5	ISM	ENSMUSG00000078700.11	ENSMUST00000135825.9	2801	6	-2	2469	-2	-1304	5prime_fragment	FALSE	canonical	2	2	junction_3	5.80409338312195	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTATGTGGGTGTTTTT	4785	False	NA	NA	False	ATTAAA	-13	NA	96834988	96853417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96835041_96835670_96835920_96843406_96843555_96850379_96851108_96851686
ES.6142.3	chr11	+	3919	6	NIC	ENSMUSG00000078700.11	novel	2801	6	NA	NA	3	1811	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.03960780543711	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAAAAGCCCC	4814	False	NA	NA	False	NA	NA	NA	96835017	96857697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96835041_96835670_96835920_96843406_96843555_96850379_96850442_96851686_96851823_96854396
ES.6142.4	chr11	+	4751	7	NNC	ENSMUSG00000078700.11	novel	3542	7	NA	NA	28	1811	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	5.63964143856288	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAAAAGCCCC	4839	False	NA	NA	False	NA	NA	NA	96835042	96857697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96835106_96835670_96835920_96843406_96843555_96849678_96849805_96850379_96851108_96851686_96851823_96854396
ES.6142.5	chr11	+	4683	6	NIC	ENSMUSG00000078700.11	novel	959	6	NA	NA	56	1826	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	5.6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCACAAAGGTCTCTTAG	4867	False	NA	NA	False	NA	NA	NA	96835070	96857712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96835177_96835670_96835920_96843406_96843555_96850379_96851108_96851686_96851823_96854396
ES.6142.6	chr11	+	2405	7	NNC	ENSMUSG00000078700.11	novel	959	6	NA	NA	60	1826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5.61001089323561	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCACAAAGGTCTCTTAG	4871	False	NA	NA	False	NA	NA	NA	96835074	96857712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96835177_96835670_96835920_96843406_96843555_96850379_96851108_96851686_96851823_96854396_96855296_96857569
ES.6142.7	chr11	+	4749	7	NIC	ENSMUSG00000078700.11	novel	959	6	NA	NA	-21	1826	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	5.61001089323561	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCACAAAGGTCTCTTAG	4913	False	NA	NA	False	NA	NA	NA	96835116	96857712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96835177_96835670_96835920_96843406_96843555_96850165_96850278_96850379_96851108_96851686_96851823_96854396
ES.6142.8	chr11	+	4851	8	NNC	ENSMUSG00000078700.11	novel	959	6	NA	NA	-12	1811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.24890659167824	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAAAAGCCCC	4922	False	NA	NA	False	NA	NA	NA	96835125	96857697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96835177_96835670_96835920_96843406_96843555_96849678_96849805_96850165_96850278_96850379_96851108_96851686_96851823_96854396
ES.6143.1	chr11	+	1441	2	Antisense	novelGene_ENSMUSG00000018678.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAAAGGGCTGT	NA	False	NA	NA	False	NA	NA	NA	96871937	96880284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_96872127_96879032
ES.6144.1	chr11	-	3092	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	-3	37	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCAGAGGTCTTACAG	NA	False	NA	20	True	NA	NA	NA	96868540	96844129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
ES.6144.16	chr11	-	3048	7	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	4931	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	174.312379237837	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCGTTTGGCAGTT	NA	False	NA	-16	True	AATAAA	-17	NA	96854560	96844165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96854474
ES.6144.17	chr11	-	1623	4	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	12196	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	221.684961651038	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCGTTTGGCAGTT	NA	False	NA	-16	True	AATAAA	-17	NA	96847295	96844165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96847272
ES.6144.20	chr11	-	2645	6	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	226.584553754222	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGCGTTTGGCAGTT	NA	False	NA	-16	True	AATAAA	-17	NA	96868502	96844165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96848450_96848563_96851863_96852836_96854190_96854271_96868446
ES.6144.22	chr11	-	2944	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	-11	13	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGAGGATGTTTTATT	NA	False	NA	2	True	ATTAAA	-29	NA	96868548	96844285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
ES.6144.25	chr11	-	4218	5	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	46	1	intron_retention	FALSE	canonical	3	58	junction_4	178.824460015961	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTGTAACTGCTTGA	NA	False	NA	-10	True	ATTAAA	-17	NA	96868491	96844297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ES.6144.26	chr11	-	3012	6	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	45	1	intron_retention	FALSE	canonical	3	301	junction_5	74.625464822673	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTGTAACTGCTTGA	NA	False	NA	-10	True	ATTAAA	-17	NA	96868492	96844297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96845397_96846600_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
ES.6144.27	chr11	-	2569	8	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	165.921176269619	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868505	96844298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96844806_96845124_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
ES.6144.28	chr11	-	7472	5	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	35	0	intron_retention	TRUE	non_canonical	0	0	junction_2	184.125636455112	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868502	96844298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96847106_96848249_96849119_96849168_96852836_96854194_96854268_96868446
ES.6144.29	chr11	-	4088	6	NIC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	36	0	intron_retention	FALSE	canonical	3	301	junction_5	69.9439775820621	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868501	96844298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
ES.6144.3	chr11	-	3086	7	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	5005	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	176.149242279255	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGGCAGTTGGGCTTCC	NA	False	NA	-8	True	AATAAA	-25	NA	96854486	96844157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96854373
ES.6144.30	chr11	-	3935	7	ISM	ENSMUSG00000018678.14	ENSMUST00000062652.7	2367	8	445	-746	445	0	3prime_fragment	FALSE	canonical	1	2	junction_6	175.414429914481	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	7104	False	NA	-11	True	ATTAAA	-16	NA	96873340	96844298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96872237
ES.6144.32	chr11	-	2892	7	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	4954	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	174.312379237837	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96854537	96844298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96854474
ES.6144.37	chr11	-	5228	5	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	42	-1	intron_retention	FALSE	canonical	3	58	junction_4	181.341356286976	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCGTTGTAACTGCTT	NA	False	NA	-12	True	ATTAAA	-15	NA	96868495	96844299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96846795_96846930_96848563_96851863_96852836_96854190_96854271_96868446
ES.6144.39	chr11	-	3900	7	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	169.62900695341	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCGTTGTAACTGCT	NA	False	NA	-13	True	ATTAAA	-14	NA	96868492	96844300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96853163_96854268_96868446
ES.6144.40	chr11	-	2497	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	54	504	54	-372	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACTGTGGACGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	96868483	96844670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ES.6144.41	chr11	-	1417	3	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	23	-6519	combination_of_known_splicesites	FALSE	canonical	3	301	junction_2	103	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATAACAGCAAGAATGA	NA	False	NA	-12	True	AATAAA	-20	NA	96868514	96851563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96852836_96854190_96854268_96868446
ES.6144.42	chr11	-	1447	3	ISM	ENSMUSG00000018678.14	ENSMUST00000062652.7	2367	8	1453	6519	1453	-6519	internal_fragment	FALSE	canonical	1	2	junction_2	252.5	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATAACAGCAAGAATGA	8112	False	NA	-12	True	AATAAA	-20	NA	96872332	96851563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_96852836_96854190_96854271_96872237
ES.6144.43	chr11	-	1460	3	NNC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	5006	-6520	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	253.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATAACAGCAAGAATG	NA	False	NA	-13	True	AATAAA	-19	NA	96854485	96851564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96852836_96854190_96854268_96854373
ES.6144.44	chr11	-	2517	1	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	40	-20936	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATCCATTCCAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	96868497	96865980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96866000_96868500
ES.6144.45	chr11	-	2509	2	Genic_Genomic	ENSMUSG00000018678.14	novel	3055	7	NA	NA	6	-20936	multi-exon	FALSE	non_canonical	1	5	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATCCATTCCAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	96868531	96865980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_96866948_96866989
ES.6144.6	chr11	-	3154	6	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	44	7	intron_retention	FALSE	canonical	3	58	junction_5	168.093545384705	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTGGCAGTTGGGCTT	NA	False	NA	-10	True	AATAAA	-23	NA	96868493	96844159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96845397_96846600_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ES.6144.7	chr11	-	3324	7	NIC	ENSMUSG00000018678.14	novel	2907	7	NA	NA	1192	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	176.149242279255	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTGGCAGTTGGGCTT	7851	False	NA	-10	True	AATAAA	-23	NA	96872593	96844159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96872237
ES.6144.9	chr11	-	2993	7	NNC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	178.294699865139	541	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGTTTGGCAGTTGGG	NA	False	NA	-13	True	AATAAA	-20	NA	96868504	96844162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848279_96848563_96851863_96852836_96854190_96854268_96868446
ES.6145.1	chr11	+	186	2	Intergenic	novelGene_4960	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCACTAGCCATCT	NA	False	NA	NA	False	NA	NA	NA	96881552	96981319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96881717_96981297
ES.6145.10	chr11	+	1582	7	FSM	ENSMUSG00000020877.12	ENSMUST00000126874.2	1552	7	-22	-8	-22	0	multi-exon	FALSE	canonical	3	106	junction_1	9.66810334151545	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920804	96924784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96924056_96924144_96924326_96924491
ES.6145.11	chr11	+	1525	8	NNC	ENSMUSG00000020877.12	novel	826	3	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	41.1958983494271	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920885	96924784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96920999_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ES.6145.12	chr11	+	1694	7	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	189	7	-7	1	3prime_fragment	FALSE	canonical	3	80	junction_4	17.8551268703293	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGAACTGGATCTCAA	NA	False	NA	10	True	AATAAA	-16	NA	96920952	96924777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ES.6145.13	chr11	+	1757	5	NNC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	-2514	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	223.871056637521	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCCTGCCTATGTTTA	456	False	NA	2	True	NA	NA	NA	96929871	96940031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96930022_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ES.6145.14	chr11	+	1721	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	-9	-4	-9	4	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATATCTGTACCCT	864	False	NA	14	True	NA	NA	NA	96932376	96940043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ES.6145.15	chr11	+	1495	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	6	207	6	-207	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTGTAAAACTGTG	879	False	NA	35	True	AATAAA	-36	NA	96932391	96939832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ES.6145.16	chr11	+	1524	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	887	False	NA	10	True	NA	NA	NA	96932399	96940039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
ES.6145.17	chr11	+	3492	4	NNC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	248.235103614833	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGCCTATGTTTAT	895	False	NA	3	True	NA	NA	NA	96932407	96940032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96934133_96937526_96938021_96938238_96938384_96938904
ES.6145.18	chr11	+	732	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	-9	-85	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTGACTTGGCTCT	899	False	NA	NA	False	NA	NA	NA	96932411	96939259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
ES.6145.2	chr11	+	4297	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	-668	-8	-668	5	multi-exon	FALSE	canonical	3	16	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCTTTGTTTGTCTTC	NA	False	NA	8	True	AATAAA	-18	NA	96908890	96915565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96909854_96912231
ES.6145.20	chr11	+	890	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	36	782	1	-87	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTGTGTGACTTGGCT	909	False	NA	NA	False	NA	NA	NA	96932421	96939257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ES.6145.21	chr11	+	4286	4	NNC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	1	-221	intron_retention	FALSE	canonical	1	5	junction_3	240.466213843026	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAGAATTATTTTA	909	False	NA	21	True	AATAAA	-22	NA	96932421	96939818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96935524_96937855_96938021_96938238_96938344_96938904
ES.6145.22	chr11	+	3284	2	NNC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	2641	-251	intron_retention	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAATAAATTTTAT	3549	False	NA	-9	True	NA	NA	NA	96935061	96939788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96936096_96937538
ES.6145.23	chr11	+	3801	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	-29	-1	-29	1	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGACCACTCATTGAAA	9912	False	NA	23	True	AATAAA	-19	NA	96941424	96959731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.24	chr11	+	3734	23	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-60	0	intron_retention	FALSE	non_canonical	0	0	junction_4	37.9122518847827	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941585	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944841_96945051_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.26	chr11	+	3573	23	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-35	0	intron_retention	FALSE	canonical	1	1	junction_16	35.9228109577666	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941610	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951374_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.28	chr11	+	3683	22	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-20	0	intron_retention	FALSE	canonical	3	35	junction_2	30.5525828279757	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941625	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958387_96958490_96958614_96958767
ES.6145.29	chr11	+	3741	22	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-2	0	intron_retention	FALSE	canonical	3	35	junction_2	34.5806756621628	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941643	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.3	chr11	+	3349	1	NIC	ENSMUSG00000038560.8	novel	3546	2	NA	NA	2651	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACACTCTCGCTTTGTT	NA	False	NA	1	True	AATAAA	-11	NA	96912209	96915558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96912200_96915600
ES.6145.30	chr11	+	3813	24	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_23	34.8116726398614	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941658	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950608_96950785_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958685_96958767
ES.6145.31	chr11	+	4707	22	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	26	-2	intron_retention	TRUE	non_canonical	0	0	junction_4	36.8673543132533	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	NA	False	NA	20	True	AATAAA	-16	NA	96941671	96959728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943982_96944199_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.32	chr11	+	3628	22	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	32	-2	intron_retention	FALSE	canonical	3	35	junction_2	34.5657872873402	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	NA	False	NA	20	True	AATAAA	-16	NA	96941677	96959728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.33	chr11	+	4548	21	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	35	0	intron_retention	FALSE	canonical	3	35	junction_2	31.3488038049301	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96941680	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490
ES.6145.34	chr11	+	3596	23	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	44	-1	intron_retention	FALSE	canonical	0	0	junction_1	36.0093250089932	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGACCACTCATTGA	NA	False	NA	21	True	AATAAA	-17	NA	96941689	96959729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96941842_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.36	chr11	+	3666	22	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	256	3	64	-3	intron_retention	FALSE	canonical	3	35	junction_2	30.9017167771184	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCTGTGACCACTCATT	NA	False	NA	19	True	AATAAA	-15	NA	96941709	96959727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490
ES.6145.38	chr11	+	4453	22	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	589	0	397	0	3prime_fragment	FALSE	canonical	3	35	junction_1	34.5316575644677	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96942042	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.39	chr11	+	3336	21	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	1809	6	111	-6	3prime_fragment	FALSE	canonical	3	36	junction_1	34.9014326353518	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCTGTGACCACTC	NA	False	NA	16	True	AATAAA	-12	NA	96943262	96959724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.4	chr11	+	3212	4	NIC	ENSMUSG00000020877.12	novel	1552	7	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	106	junction_1	12.0369800568452	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTGGATCTCAAGTCTA	NA	False	NA	15	True	AATAAA	-21	NA	96920754	96924782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96920882_96921241_96921416_96921705_96924326_96924491
ES.6145.40	chr11	+	184	1	Intergenic	novelGene_4962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	96943984	96944168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96944000_96944200
ES.6145.41	chr11	+	370	1	Genic_Genomic	ENSMUSG00000038534.20	novel	NA	NA	NA	NA	-264	554	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAATAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	96943985	96944355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_96944000_96944400
ES.6145.42	chr11	+	2264	11	ISM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	7830	2	5034	-2	3prime_fragment	FALSE	canonical	3	37	junction_2	42.5765193504589	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGTGACCACTCATTG	4991	False	NA	20	True	AATAAA	-16	NA	96949283	96959728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.43	chr11	+	2238	9	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	9011	6	6407	-6	3prime_fragment	FALSE	canonical	3	42	junction_3	42.4792228624771	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCTGTGACCACTC	6364	False	NA	16	True	AATAAA	-12	NA	96950656	96959724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.44	chr11	+	4226	4	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-3509	0	intron_retention	FALSE	canonical	3	42	junction_1	49.4233413142684	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	9907	False	NA	22	True	AATAAA	-18	NA	96954199	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96956479_96956606_96956686_96957758_96958387_96958490
ES.6145.45	chr11	+	1616	6	ISM	ENSMUSG00000038534.20	ENSMUST00000168565.2	3535	24	14927	0	-1136	0	3prime_fragment	FALSE	canonical	3	70	junction_1	34.0141147172758	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96956572	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.46	chr11	+	1121	3	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	-1102	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCTGTGACCACTC	NA	False	NA	16	True	AATAAA	-12	NA	96956606	96959724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96956686_96957758_96957869_96958792
ES.6145.47	chr11	+	1542	5	FSM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	3	-625	3	-8	multi-exon	FALSE	canonical	3	78	junction_1	29.0978951128772	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGGCCTGTGACCAC	NA	False	NA	14	True	AATAAA	-10	NA	96957711	96959722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.48	chr11	+	1410	4	NIC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	52.0021367082375	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96957728	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96957904_96958030_96958176_96958259_96958387_96958767
ES.6145.49	chr11	+	1449	4	ISM	ENSMUSG00000038534.20	ENSMUST00000143360.2	920	5	231	-633	231	0	3prime_fragment	FALSE	canonical	3	130	junction_3	12.5521135891752	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96957939	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_96958176_96958259_96958387_96958490_96958614_96958767
ES.6145.5	chr11	+	1535	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	-5	0	-5	0	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920758	96924784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ES.6145.50	chr11	+	1443	3	NIC	ENSMUSG00000038534.20	novel	920	5	NA	NA	315	-6	intron_retention	FALSE	canonical	3	130	junction_2	14	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCTGTGACCACTC	NA	False	NA	16	True	AATAAA	-12	NA	96958023	96959724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96958387_96958490_96958614_96958767
ES.6145.51	chr11	+	1348	4	NNC	ENSMUSG00000038534.20	novel	3771	23	NA	NA	349	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	66.0504857413378	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	NA	False	NA	22	True	AATAAA	-18	NA	96958057	96959730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96958176_96958242_96958387_96958490_96958614_96958767
ES.6145.52	chr11	+	197	1	Intergenic	novelGene_4963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGGATTTGAAAAACAAA	2048	False	NA	NA	False	NA	NA	NA	96969074	96969271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96969100_96969300
ES.6145.53	chr11	+	2409	4	Intergenic	novelGene_4966	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2.35702260395516	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTGTTTATATTTTA	9221	False	NA	NA	False	NA	NA	NA	96976247	96982040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96976322_96976517_96977725_96979782_96980370_96981499
ES.6145.54	chr11	+	1435	1	Intergenic	novelGene_4967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCACTAGCCATCT	NA	False	NA	NA	False	NA	NA	NA	96979884	96981319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_96979900_96981300
ES.6145.6	chr11	+	3368	3	FSM	ENSMUSG00000020877.12	ENSMUST00000133054.8	605	3	-19	-2744	-5	0	multi-exon	FALSE	canonical	3	106	junction_1	14	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGAACTGGATCTCA	NA	False	NA	9	True	AATAAA	-15	NA	96920758	96924776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_96920882_96921241_96921416_96921705
ES.6145.7	chr11	+	3123	5	NIC	ENSMUSG00000020877.12	novel	1552	7	NA	NA	-5	2	intron_retention	FALSE	canonical	3	106	junction_1	10.4880884817015	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATCTCAAGTCTATTGA	NA	False	NA	19	True	AATAAA	-25	NA	96920758	96924786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96920882_96921241_96921416_96921705_96924056_96924144_96924326_96924491
ES.6145.8	chr11	+	2813	5	NIC	ENSMUSG00000020877.12	novel	1530	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	80	junction_4	21.2132034355964	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920762	96924784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_96920882_96921241_96921416_96921705_96923115_96923580_96923797_96923889
ES.6145.9	chr11	+	676	4	NNC	ENSMUSG00000020877.12	novel	1552	7	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	51.4414445969611	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGAACTGGATCTCAA	NA	False	NA	10	True	AATAAA	-16	NA	96920782	96924777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_96920882_96921241_96921352_96924144_96924326_96924491
ES.6146.1	chr11	-	176	1	Intergenic	novelGene_4961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAATAATGCCT	3152	False	NA	NA	False	NA	NA	NA	96933229	96933053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96933100_96933200
ES.6147.1	chr11	-	4349	2	NNC	ENSMUSG00000085262.2	novel	946	3	NA	NA	1657	3482	intron_retention	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAGTGGAATCCCGCCC	4338	False	NA	NA	False	NA	NA	NA	96940601	96936034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_96938017_96938234
ES.6147.2	chr11	-	4567	1	Genic_Genomic	ENSMUSG00000085262.2	novel	NA	NA	NA	NA	1657	3482	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAGTGGAATCCCGCCC	4338	False	NA	NA	False	NA	NA	NA	96940601	96936034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_96936000_96940600
ES.6148.1	chr11	-	2983	2	Intergenic	novelGene_4964	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTGCTTAGAATATTT	678	False	NA	NA	False	AATAAA	-26	NA	96976998	96970935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96973818_96976897
ES.6148.2	chr11	-	260	1	Intergenic	novelGene_4965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTCTC	1171	False	NA	NA	False	NA	NA	NA	96976505	96976245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_96976200_96976500
ES.6149.1	chr11	+	176	1	Intergenic	novelGene_4968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	97002702	97002878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97002700_97002900
ES.615.1	chr1	-	3105	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCTGGCAACACCATA	3652	False	NA	NA	False	NA	NA	NA	62794962	62791857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_62791900_62795000
ES.6150.1	chr11	-	2555	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	-61	-6	-61	6	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCTGTGGCTGGTCGG	NA	False	NA	NA	False	AATAAA	-22	NA	97006218	96988890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
ES.6151.1	chr11	+	176	1	Intergenic	novelGene_4969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGACTGGTGATTTT	NA	False	NA	NA	False	NA	NA	NA	97007434	97007610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97007400_97007600
ES.6152.1	chr11	+	173	1	Intergenic	novelGene_4970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGAGAACTGTTGTTT	3776	False	NA	NA	False	NA	NA	NA	97017344	97017517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97017300_97017500
ES.6153.1	chr11	+	3752	1	Antisense	novelGene_ENSMUSG00000038517.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTGGCTATAGTAGCACA	70	False	NA	NA	False	AAAAAG	-7	NA	97030031	97033783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97030000_97033800
ES.6154.1	chr11	-	3370	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	14.4990421139544	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGCTCAGGCTGTGCTT	6074	False	NA	0	True	AATAAA	-19	NA	97042331	97026996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
ES.6154.11	chr11	-	3591	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	180	-2	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	17.5499287747842	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCGCTCAGGCTGT	6264	False	NA	-4	True	AATAAA	-15	NA	97042141	97027000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97041784
ES.6154.12	chr11	-	3223	10	NNC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	329	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6005858893585	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTGCGCTCAGGCTG	8196	False	NA	-5	True	AATAAA	-14	NA	97040209	97027001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97028502_97029059_97029279_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187
ES.6154.15	chr11	-	2090	9	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-11	8	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	14.945212444124	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCGACTCCACTGCAT	6073	False	NA	-2	True	ATTAAA	-23	NA	97042332	97029223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
ES.6154.17	chr11	-	2025	9	NIC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	-12	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	15.6079907419245	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGATTCCGACTCCAC	7519	False	NA	-7	True	ATTAAA	-18	NA	97040886	97029228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
ES.6154.18	chr11	-	3193	8	ISM	ENSMUSG00000038517.16	ENSMUST00000107614.8	2391	10	181	1306	181	1	internal_fragment	FALSE	canonical	3	33	junction_4	10.0974840268985	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTGATTCCGACTCC	6724	False	NA	-9	True	ATTAAA	-16	NA	97041681	97029230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187
ES.6154.19	chr11	-	2032	9	ISM	ENSMUSG00000038517.16	ENSMUST00000107614.8	2391	10	-2	1307	-2	0	5prime_fragment	FALSE	canonical	2	9	junction_8	17.2296075114902	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTTGATTCCGACTC	6541	False	NA	-10	True	ATTAAA	-15	NA	97041864	97029231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97041784
ES.6154.2	chr11	-	2185	3	NNC	ENSMUSG00000038517.16	novel	3338	9	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	18.5	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGCTCAGGCTGTGCTT	6062	False	NA	0	True	AATAAA	-19	NA	97042343	97026996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97028502_97029447_97030063_97042278
ES.6154.20	chr11	-	2137	10	NNC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	22.8327250527249	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTTGATTCCGACTC	6164	False	NA	-10	True	ATTAAA	-15	NA	97042241	97029231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97030161_97030297_97030417_97031025_97031169_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
ES.6154.4	chr11	-	4481	9	FSM	ENSMUSG00000038517.16	ENSMUST00000066078.12	3338	9	-1145	2	179	0	multi-exon	FALSE	canonical	3	33	junction_5	10.7579912158358	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	6722	False	NA	-2	True	AATAAA	-17	NA	97041683	97026998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187
ES.6154.6	chr11	-	3346	10	NIC	ENSMUSG00000038517.16	novel	3288	10	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	15.1070255914995	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7482	False	NA	-2	True	AATAAA	-17	NA	97040923	97026998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
ES.6154.8	chr11	-	3671	1	NIC	ENSMUSG00000038517.16	novel	3338	9	NA	NA	9869	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	NA	False	NA	-2	True	AATAAA	-17	NA	97030669	97026998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97027000_97030700
ES.6154.9	chr11	-	3293	11	NNC	ENSMUSG00000038517.16	novel	2391	10	NA	NA	-3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.9760375210422	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCGCTCAGGCTGT	6081	False	NA	-4	True	AATAAA	-15	NA	97042324	97027000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97027758_97027826_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037460_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
ES.6155.10	chr11	+	6911	17	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	21000	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTAGATATTCAGGC	963	False	NA	NA	False	NA	NA	NA	97051830	97073501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97054343_97054740_97055657_97055778_97055923_97056201_97056307_97056869_97056958_97058377_97058523_97059692_97059763_97059973_97060122_97060727_97060858_97062346_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269_97071422_97072449
ES.6155.11	chr11	+	5956	16	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	17	20985	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	965	False	NA	NA	False	NA	NA	NA	97051832	97073486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97054343_97054742_97056305_97056867_97056958_97058376_97058523_97059692_97059763_97059973_97060122_97060727_97060858_97062346_97062542_97063880_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069753_97071267_97071422_97072449
ES.6155.12	chr11	+	2359	8	Antisense	novelGene_ENSMUSG00000001440.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	97061954	97073483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97062542_97063880_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269_97071422_97072449
ES.6155.2	chr11	+	4858	19	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	20985	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGCT	963	False	NA	NA	False	NA	NA	NA	97051830	97073486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97054343_97054742_97054855_97055550_97055657_97055778_97055923_97056201_97056307_97056869_97056958_97058378_97058523_97059692_97059763_97059973_97060122_97060727_97060858_97062346_97062542_97063881_97064107_97066576_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269_97071422_97072449
ES.6155.3	chr11	+	3605	11	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	9864	intron_retention	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGGGCTCAGCACTGA	963	False	NA	NA	False	AAGAAA	-28	NA	97051830	97062365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97054343_97054740_97055657_97055778_97055923_97056201_97056307_97056869_97056958_97058377_97058523_97059692_97059763_97059973_97060120_97060726_97060858_97062346
ES.6155.4	chr11	+	7398	14	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	21000	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTAGATATTCAGGC	963	False	NA	NA	False	NA	NA	NA	97051830	97073501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97056307_97056869_97056958_97058377_97058523_97059692_97059763_97059973_97060122_97060727_97060856_97062345_97062542_97063880_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269
ES.6155.5	chr11	+	5572	18	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	21000	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTAGATATTCAGGC	963	False	NA	NA	False	NA	NA	NA	97051830	97073501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97054343_97054740_97055657_97055778_97055923_97056201_97056307_97056869_97056958_97058377_97058523_97059692_97059763_97059973_97060122_97060727_97060858_97062346_97062542_97063880_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269_97071422_97072449
ES.6155.7	chr11	+	8823	13	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	21000	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTAGATATTCAGGC	963	False	NA	NA	False	NA	NA	NA	97051830	97073501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97053508_97054178_97056307_97056869_97058523_97059692_97059763_97059973_97060122_97060727_97060858_97062346_97062542_97063880_97064107_97066573_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269
ES.6155.9	chr11	+	9842	10	NNC	ENSMUSG00000084936.2	novel	466	2	NA	NA	15	21000	intron_retention	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTAGATATTCAGGC	963	False	NA	NA	False	NA	NA	NA	97051830	97073501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97058523_97059692_97060858_97062346_97062542_97063880_97064107_97066577_97066676_97068070_97068183_97069095_97069181_97069688_97069754_97071269_97071422_97072449
ES.6156.1	chr11	+	1095	1	Intergenic	novelGene_4971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTTTGGCTGTGAT	NA	False	NA	NA	False	AAGAAA	-27	NA	97079068	97080163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97079100_97080200
ES.6157.1	chr11	-	6003	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-108	-1	-108	1	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGCTTCGTTCTTTG	NA	False	NA	-3	True	AATAAA	-26	NA	97078815	97050538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.11	chr11	-	6157	21	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	815	-1	intron_retention	FALSE	canonical	0	0	junction_20	239.45404569562	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	-5	True	AATAAA	-24	NA	97077892	97050540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97077233
ES.6157.12	chr11	-	6516	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	682	junction_20	135.63889560152	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	-5	True	AATAAA	-24	NA	97078724	97050540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.14	chr11	-	6573	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	15	-2	intron_retention	FALSE	canonical	3	682	junction_20	134.914889838001	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGCTGCTTCGTTCT	NA	False	NA	-6	True	AATAAA	-23	NA	97078692	97050541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.16	chr11	-	5966	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-57	-3	intron_retention	FALSE	canonical	1	2	junction_13	244.528682661137	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTGCTGCTTCGTTC	NA	False	NA	-7	True	AATAAA	-22	NA	97078764	97050542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064122_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.17	chr11	-	3588	6	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-74	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	445.619389165238	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTTGCTGCTTCGTTC	NA	False	NA	-7	True	AATAAA	-22	NA	97056300	97050542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054847_97055545_97055657_97055778_97055923_97056201
ES.6157.21	chr11	-	4681	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-76	1289	-76	-1289	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGCTCCTTTCATCCCC	NA	False	NA	NA	False	NA	NA	NA	97078783	97051828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.23	chr11	-	4237	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	103	1283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.281487301649	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGTTTTAGAGTCTT	NA	False	NA	NA	False	AATAAA	-36	NA	97078604	97052052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97052233_97052273_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.24	chr11	-	4469	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-90	1515	-90	1281	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGAGTTTTAGAGTC	NA	False	NA	NA	False	AATAAA	-34	NA	97078797	97052054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.25	chr11	-	4220	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	4	1670	4	1126	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGGAAGAAGGCTCTAT	NA	False	NA	NA	False	AATACA	-20	NA	97078703	97052209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.26	chr11	-	4618	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-538	1814	-538	982	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTGTCCCTTTCTTTG	NA	False	NA	-1	True	GATAAA	-23	NA	97079245	97052353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.27	chr11	-	5984	20	ISM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	470	1817	470	979	intron_retention	FALSE	canonical	3	824	junction_19	106.099989426167	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCTTCTGTCCCTTTCT	NA	False	NA	-4	True	GATAAA	-20	NA	97078237	97052356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752
ES.6157.3	chr11	-	7276	19	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-8	0	intron_retention	FALSE	canonical	3	682	junction_18	136.766731659746	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGCTTCGTTCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	97078715	97050539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97055657_97055778_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.31	chr11	-	4285	16	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	7392	978	intron_retention	FALSE	canonical	3	874	junction_13	98.72709861026	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97071315	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269
ES.6157.34	chr11	-	3970	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	16	978	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	249.13391981021	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078691	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.36	chr11	-	5782	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-190	978	intron_retention	FALSE	canonical	3	682	junction_20	136.885088669292	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078897	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.37	chr11	-	4843	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-71	978	intron_retention	FALSE	canonical	3	682	junction_20	134.914889838001	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078778	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.39	chr11	-	3779	20	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-57	978	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	256.051306319933	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078764	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97075752_97075936_97078214_97078274_97078371
ES.6157.40	chr11	-	4126	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-57	978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.978185332626	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078764	97052357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056879_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.41	chr11	-	4030	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-33	977	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.978185332626	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCCTTCTGTCCCTTT	NA	False	NA	-6	True	GATAAA	-18	NA	97078740	97052358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056232_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.44	chr11	-	4077	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-17	977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	310.178530992129	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCCTTCTGTCCCTTT	NA	False	NA	-6	True	GATAAA	-18	NA	97078724	97052358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058371_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069735_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.45	chr11	-	3921	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-104	977	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.281487301649	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCCTTCTGTCCCTTT	NA	False	NA	-6	True	GATAAA	-18	NA	97078811	97052358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97052611_97052868_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.49	chr11	-	4153	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-98	976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	307.895865424624	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCCTTCTGTCCCTT	NA	False	NA	-7	True	GATAAA	-17	NA	97078805	97052359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078222_97078263_97078371
ES.6157.5	chr11	-	4835	5	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-2202	-1	intron_retention	FALSE	canonical	3	1078	junction_4	63.7867541108654	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	-5	True	AATAAA	-24	NA	97058428	97050540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97056310_97056872_97056956_97058375
ES.6157.50	chr11	-	4124	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-51	976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	244.844751589558	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCCTTCTGTCCCTT	NA	False	NA	-7	True	GATAAA	-17	NA	97078758	97052359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066670_97068065_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.51	chr11	-	4112	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-104	976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	306.494428515012	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCCTTCTGTCCCTT	NA	False	NA	-7	True	GATAAA	-17	NA	97078811	97052359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072446_97072652_97075752_97075936_97078214_97078274_97078371_97078642_97078711
ES.6157.52	chr11	-	4053	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-59	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	239.281487301649	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCCTTCTGTCCCTT	NA	False	NA	-7	True	GATAAA	-17	NA	97078766	97052359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371_97078589_97078668
ES.6157.54	chr11	-	4368	21	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	785	976	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	239.45404569562	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCCTTCTGTCCCTT	NA	False	NA	-7	True	GATAAA	-17	NA	97077922	97052359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97077233
ES.6157.57	chr11	-	3980	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	86	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	242.316522449779	1370	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGGCCTTCTGTCCCT	NA	False	NA	-8	True	GATAAA	-16	NA	97078621	97052360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058382_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.58	chr11	-	4011	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	4	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.281487301649	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTGGCCTTCTGTCCC	NA	False	NA	-9	True	GATAAA	-15	NA	97078703	97052361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97052542_97052598_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.6	chr11	-	5178	19	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	6103	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	330.152022596699	1400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	-5	True	AATAAA	-24	NA	97072604	97050540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069189_97069709_97069754_97071269_97071346_97072450
ES.6157.60	chr11	-	4311	21	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	716	972	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	239.45404569562	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCTTGGCCTTCTGTC	NA	False	NA	-11	True	GATAAA	-13	NA	97077991	97052363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97077355
ES.6157.62	chr11	-	4100	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-33	969	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	307.730114108535	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAACTGCTTGGCCTTCT	NA	False	NA	-14	True	GATAAA	-10	NA	97078740	97052366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056950_97058371_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078369
ES.6157.63	chr11	-	3913	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	41	900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	305.985623541465	1369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGGTAACTATTTTGAA	NA	False	NA	-32	True	AATAAA	-25	NA	97078666	97052435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054758_97054825_97055545_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.67	chr11	-	4006	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-25	889	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	244.548266964384	1369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCGCAAACTTCAGGTA	NA	False	NA	-43	True	AATAAA	-14	NA	97078732	97052446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072456_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.68	chr11	-	3935	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-33	887	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.281487301649	1369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAACCGCAAACTTCAGG	NA	False	NA	-45	True	AATAAA	-12	NA	97078740	97052448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053075_97053157_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.69	chr11	-	3877	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-59	2076	-59	720	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGACTTCAAAGACAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	97078766	97052615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.70	chr11	-	3076	19	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	6199	720	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_8	248.204919570031	1363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGACTTCAAAGACAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	97072508	97052615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058500_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450
ES.6157.72	chr11	-	3720	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-102	2276	-102	520	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTGGTTTGGTTTCAT	NA	False	NA	17	True	TTTAAA	-18	NA	97078809	97052815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.75	chr11	-	4321	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-59	468	intron_retention	FALSE	canonical	3	682	junction_20	134.914889838001	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGCAGCACAAGAGACG	NA	False	NA	-35	True	CATAAA	-20	NA	97078766	97052867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97053508_97054178_97054341_97054739_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.76	chr11	-	3291	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	-60	2663	-60	133	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTTCCTGTCTTGGCCG	NA	False	NA	-14	True	ATTAAA	-38	NA	97078767	97053202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.77	chr11	-	3093	22	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	69	118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	243.28425560431	1304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAGGCTAGAACTAGCT	NA	False	NA	-29	True	ATTAAA	-23	NA	97078638	97053217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069132_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6157.8	chr11	-	5913	23	NNC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-61	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	239.281487301649	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGCTGCTTCGTTCTT	NA	False	NA	-5	True	AATAAA	-24	NA	97078768	97050540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97052233_97052273_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ES.6158.1	chr11	+	1272	1	Intergenic	novelGene_4972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTACAGATTGCCCAGGCA	NA	False	NA	NA	False	AAAAAG	-45	NA	97080427	97081699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97080400_97081700
ES.6159.1	chr11	+	181	1	Intergenic	novelGene_4975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGATC	NA	False	NA	NA	False	NA	NA	NA	97115759	97115940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97115800_97115900
ES.616.1	chr1	+	184	2	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATACCCT	NA	False	NA	NA	False	NA	NA	NA	63053812	63085383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63053820_63085206
ES.616.2	chr1	+	181	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	63053814	63053995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63053800_63054000
ES.616.3	chr1	+	358	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	63085203	63085561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63085200_63085600
ES.6160.1	chr11	+	176	1	Intergenic	novelGene_4976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGTGTGTA	NA	False	NA	NA	False	NA	NA	NA	97124032	97124208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97124000_97124200
ES.6161.1	chr11	+	217	1	Intergenic	novelGene_4977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAACAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	97127780	97127997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97127800_97128000
ES.6162.1	chr11	+	178	1	Intergenic	novelGene_4979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGTCAAT	1427	False	NA	NA	False	NA	NA	NA	97162959	97163137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97163000_97163100
ES.6163.1	chr11	-	227	1	Intergenic	novelGene_4973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAACTTTTAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	97094918	97094691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97094700_97094900
ES.6163.10	chr11	-	4069	2	FSM	ENSMUSG00000001441.14	ENSMUST00000107608.3	544	2	-2459	-1066	-1626	0	multi-exon	FALSE	canonical	3	424	junction_1	0	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	9582	False	NA	0	True	AATAAA	-15	NA	97105747	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97098095_97103105
ES.6163.11	chr11	-	4092	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_7	96.7588059502887	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171494	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131776_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.12	chr11	-	2916	14	NNC	ENSMUSG00000001441.14	novel	2812	22	NA	NA	-3171	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	97.2145799569849	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97129079	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97103996_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919
ES.6163.13	chr11	-	4389	25	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	111.704587777564	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171356	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97142338_97142503_97149099_97149178_97158420_97158506_97171026
ES.6163.14	chr11	-	4063	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_14	74.1931948718294	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171332	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131776_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.15	chr11	-	6122	3	NIC	ENSMUSG00000001441.14	novel	2078	16	NA	NA	-4262	0	intron_retention	FALSE	canonical	3	318	junction_2	53	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	6946	False	NA	0	True	AATAAA	-15	NA	97108383	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97104014_97104596
ES.6163.16	chr11	-	4152	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	74.9106906272258	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171405	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117689_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.17	chr11	-	4092	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	76.2242369428561	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171345	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139144_97149099_97149178_97158420_97158506_97171026
ES.6163.18	chr11	-	4371	24	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	94.9781389631707	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171502	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97149099_97149178_97158420_97158506_97171026
ES.6163.19	chr11	-	3947	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.4980706885014	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171192	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120716_97122706_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.2	chr11	-	223	2	Intergenic	novelGene_4974	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTAAACTTTTAAAAGAT	8358	False	NA	NA	False	NA	NA	NA	97106971	97094693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97094838_97106892
ES.6163.20	chr11	-	3725	15	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-171	0	intron_retention	FALSE	canonical	1	3	junction_6	93.4503305810861	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	9409	False	NA	-2	True	AATAAA	-13	NA	97132875	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97132664_97132776
ES.6163.22	chr11	-	5653	14	ISM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	39664	0	892	0	intron_retention	FALSE	canonical	3	299	junction_11	34.4447074283189	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97131800	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919
ES.6163.23	chr11	-	4031	17	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	118	0	intron_retention	FALSE	canonical	3	11	junction_7	85.7152808721992	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	9074	False	NA	-2	True	AATAAA	-13	NA	97133854	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776
ES.6163.26	chr11	-	4040	22	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	77.7673429994121	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171374	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97171026
ES.6163.27	chr11	-	4520	21	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_9	102.722003485135	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171355	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120716_97122714_97122825_97125880_97125942_97126890_97126996_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.28	chr11	-	5495	21	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_5	101.213870096939	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171412	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97104705_97108616_97108674_97109333_97109477_97113776_97113990_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97127048_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.3	chr11	-	2590	1	Genic_Genomic	ENSMUSG00000001441.14	novel	NA	NA	NA	NA	4212	181	mono-exon	FALSE	NA	NA	NA	NA	NA	516	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97099076	97096486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97096500_97099100
ES.6163.30	chr11	-	3053	10	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	267	0	intron_retention	FALSE	canonical	3	11	junction_6	113.159670868694	550	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	4151	False	NA	-2	True	AATAAA	-13	NA	97122821	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714
ES.6163.31	chr11	-	8756	11	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	1905	0	intron_retention	FALSE	canonical	3	299	junction_9	35.2370543604314	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97130787	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890
ES.6163.32	chr11	-	4019	23	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	74.3733184406059	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171401	97096669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.39	chr11	-	4635	22	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	268	junction_17	36.990223627209	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171303	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.4	chr11	-	4229	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	-12	-2	-12	0	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171476	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.40	chr11	-	4005	22	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-25	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	77.5490481906996	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171421	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.41	chr11	-	7380	21	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	6	-2	intron_retention	FALSE	canonical	3	11	junction_6	75.7521451841464	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171390	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.42	chr11	-	4364	25	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	135.535435096017	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171356	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131776_97131870_97132629_97132665_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97142338_97142503_97149099_97149178_97158420_97158506_97171026
ES.6163.43	chr11	-	4107	22	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	77.9282186132586	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171362	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132746_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.44	chr11	-	4102	24	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_20	111.298267496965	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171370	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113864_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97149099_97149178_97158420_97158506_97171026
ES.6163.45	chr11	-	5482	21	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	2	-2	intron_retention	FALSE	canonical	3	3	junction_11	76.9480344128425	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171394	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97127048_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.46	chr11	-	4065	24	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	74.736436706901	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171398	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026_97171103_97171184
ES.6163.47	chr11	-	4155	23	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	114.891118056464	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171375	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97149099_97149178_97171026
ES.6163.48	chr11	-	3633	21	NIC	ENSMUSG00000001441.14	novel	2812	22	NA	NA	41	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	79.1621595208216	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTTGTTGGCCTGGTTC	NA	False	NA	-4	True	AATAAA	-11	NA	97171193	97096671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.49	chr11	-	4040	17	NIC	ENSMUSG00000001441.14	novel	2812	22	NA	NA	25	-3	intron_retention	FALSE	canonical	3	281	junction_15	33.5754746801888	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTGTTGGCCTGGTT	9344	False	NA	-5	True	AATAAA	-10	NA	97133584	97096672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428
ES.6163.5	chr11	-	3586	22	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	9305	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	119.152810668693	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	910	False	NA	0	True	AATAAA	-15	NA	97149144	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125933_97126890_97126996_97128196_97128260_97129048_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099
ES.6163.50	chr11	-	3491	1	NIC	ENSMUSG00000001441.14	novel	2307	18	NA	NA	3124	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAATTTGTTGGCCTGGT	NA	False	NA	-6	True	AATAAA	-9	NA	97100164	97096673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97096700_97100200
ES.6163.52	chr11	-	4184	23	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	5	-10	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	75.6009532494889	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATGTGAATTTGTTGG	NA	False	NA	-12	True	AATAAA	-3	NA	97171391	97096679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97127048_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.53	chr11	-	3610	19	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-4	-10	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	83.2109471667945	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATGTGAATTTGTTGG	NA	False	NA	-12	True	AATAAA	-3	NA	97171316	97096679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.54	chr11	-	4124	23	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-17	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	75.9852231175997	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATGTGAATTTGTTGG	NA	False	NA	-12	True	AATAAA	-3	NA	97171413	97096679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139057_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.55	chr11	-	3896	21	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-29	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	79.8326374360762	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATGTGAATTTGTTGG	NA	False	NA	-12	True	AATAAA	-3	NA	97171425	97096679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.58	chr11	-	3947	21	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	3	-18	combination_of_known_splicesites	FALSE	canonical	1	24	junction_20	75.2269898374247	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGTCAATGTGAA	NA	False	NA	-20	True	ATTAAA	-15	NA	97171377	97096687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97171026
ES.6163.59	chr11	-	4174	24	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	69	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	127.920742829788	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGTCAATGTGAA	NA	False	NA	-20	True	ATTAAA	-15	NA	97171165	97096687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132746_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97142338_97142503_97149099_97149178_97158420_97158506_97171026
ES.6163.6	chr11	-	4334	24	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_21	95.1456151944862	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171450	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97154721_97154853_97158420_97158506_97171026
ES.6163.60	chr11	-	1838	4	NIC	ENSMUSG00000001441.14	novel	2812	22	NA	NA	5	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	192.363082621265	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGTCAATGTGAA	NA	False	NA	-20	True	ATTAAA	-15	NA	97171253	97096687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97171026
ES.6163.62	chr11	-	3602	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	2	611	2	453	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCCTCCCTCCCTTCCC	NA	False	NA	NA	False	AAAAAG	-42	NA	97171462	97097280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.63	chr11	-	3217	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	-6	1004	-6	60	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGAAGCCTGTCATGG	NA	False	NA	NA	False	AATAAA	-25	NA	97171470	97097673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.64	chr11	-	3036	22	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	2	52	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	77.5490481906996	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAAACTTCCTGAAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	97171462	97097681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.65	chr11	-	3223	24	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	24	49	combination_of_known_junctions	FALSE	canonical	3	8	junction_21	95.1456151944862	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTGAAACTTCCTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	97171356	97097684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97154721_97154853_97158420_97158506_97171026
ES.6163.69	chr11	-	5356	12	NIC	ENSMUSG00000001441.14	novel	2812	22	NA	NA	1387	0	intron_retention	FALSE	canonical	3	299	junction_9	33.5458240925691	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	NA	False	NA	NA	False	ATTAAA	-33	NA	97131305	97097758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919
ES.6163.7	chr11	-	4094	22	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.0763694537047	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171423	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97103154_97103857_97104010_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97158420_97158506_97171026
ES.6163.70	chr11	-	3753	22	NNC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	24	-26	intron_retention	FALSE	canonical	3	3	junction_12	98.3557566962069	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAGGAAAATCAGCAG	NA	False	NA	NA	False	ATTAAA	-7	NA	97171356	97097784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098095_97103105_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97127048_97128919_97129085_97131754_97131870_97132629_97132664_97132771_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.71	chr11	-	5899	4	NNC	ENSMUSG00000001441.14	novel	1239	12	NA	NA	998	-961	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	154.199726185086	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGGTGGGGTGAGTTA	NA	False	NA	NA	False	NA	NA	NA	97131694	97098944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97098955_97122932_97125942_97126890_97126996_97128919
ES.6163.72	chr11	-	4268	19	ISM	ENSMUSG00000001441.14	ENSMUST00000172108.8	2924	22	6	10085	6	-2390	5prime_fragment	FALSE	canonical	3	268	junction_14	26.4353976121711	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGCAAGGATCTGGGT	NA	False	NA	NA	False	AATAAA	-23	NA	97171390	97106752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.73	chr11	-	3233	9	ISM	ENSMUSG00000001441.14	ENSMUST00000172108.8	2924	22	19	33045	3	3074	5prime_fragment	FALSE	canonical	3	268	junction_4	21.879999428702	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGCTCTTAGTTCCTG	NA	False	NA	NA	False	AATAAA	-18	NA	97171377	97129712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.74	chr11	-	1837	9	ISM	ENSMUSG00000001441.14	ENSMUST00000172108.8	2924	22	-2	34462	-2	1657	5prime_fragment	FALSE	canonical	3	268	junction_4	21.879999428702	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTTAGTGTTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	97171398	97131129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ES.6163.75	chr11	-	2632	8	NIC	ENSMUSG00000001441.14	novel	1239	12	NA	NA	24	1651	intron_retention	FALSE	canonical	3	8	junction_4	134.0412668714	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAATTATGTTAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	97171210	97131135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97149099_97149178_97158420_97158506_97171026
ES.6163.76	chr11	-	178	1	Intergenic	novelGene_4978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATAGAAAAATT	4498	False	NA	NA	False	NA	NA	NA	97145556	97145378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97145400_97145600
ES.6163.8	chr11	-	3359	18	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	-1389	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	85.8226222586416	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	7567	False	NA	0	True	AATAAA	-15	NA	97135361	97096667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253
ES.6164.1	chr11	+	2873	1	Genic_Genomic	ENSMUSG00000086680.3	novel	NA	NA	NA	NA	570	673	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAATAAATA	9991	False	NA	NA	False	NA	NA	NA	97171523	97174396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_97171500_97174400
ES.6165.1	chr11	+	172	1	Intergenic	novelGene_4980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATACTACACAC	NA	False	NA	NA	False	NA	NA	NA	97181361	97181533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97181400_97181500
ES.6166.1	chr11	-	157	1	Intergenic	novelGene_4981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1091	False	NA	NA	False	NA	NA	NA	97186980	97186823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97186800_97187000
ES.6167.1	chr11	+	193	1	Intergenic	novelGene_4985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTATTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97199313	97199506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97199300_97199500
ES.6168.1	chr11	+	3581	10	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-4434	204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1353.1884523799	982	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACCGTTCTTCAGCTT	NA	False	NA	NA	False	NA	NA	NA	97202107	97220950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97202734_97202942_97203455_97206123_97206156_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.10	chr11	+	2577	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	140	-286	-52	286	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACATGCAGTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	97206681	97221032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.11	chr11	+	2170	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	140	121	-52	-121	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGTTTCTCTGTGTAA	NA	False	NA	NA	False	AATATA	-20	NA	97206681	97220625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.12	chr11	+	4389	1	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-52	-1481	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	952	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	97206681	97211070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206700_97211100
ES.6168.13	chr11	+	2896	7	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-52	-809	intron_retention	FALSE	canonical	1	1	junction_4	1092.05784340086	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206681	97219937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97215166_97216534_97217758_97218911_97219086_97219307
ES.6168.14	chr11	+	4207	2	NNC	ENSMUSG00000018882.13	novel	493	3	NA	NA	-52	-1457	intron_retention	FALSE	non_canonical	0	0	junction_1	0	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTAAATTTTGGGCTG	NA	False	NA	NA	False	NA	NA	NA	97206681	97211094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97209515_97209720
ES.6168.15	chr11	+	2502	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-812	intron_retention	FALSE	canonical	3	2561	junction_3	180.426962754708	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97206682	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97217758_97218911_97219086_97219307
ES.6168.16	chr11	+	1380	9	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	960.640012895049	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97206682	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307_97219458_97219555
ES.6168.19	chr11	+	1868	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-812	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1018.48226417988	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97206682	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97215166_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.2	chr11	+	275	1	Intergenic	novelGene_4986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTGGAGCGTATCA	NA	False	NA	NA	False	NA	NA	NA	97202748	97203023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97202700_97203000
ES.6168.20	chr11	+	4736	7	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-809	intron_retention	FALSE	non_canonical	0	0	junction_3	1394.28839875002	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97213565_97213772_97214776_97216534_97217907_97218911_97219086_97219307
ES.6168.21	chr11	+	2218	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-50	-813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1021.77023256859	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTGTGTTCTGTACA	NA	False	NA	NA	False	AATAAA	-20	NA	97206683	97219933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97217326_97217607_97217758_97218911_97219086_97219307
ES.6168.22	chr11	+	3040	1	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-50	-2828	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	951	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGCCCATGAGCATACA	NA	False	NA	NA	False	NA	NA	NA	97206683	97209723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206700_97209700
ES.6168.23	chr11	+	1303	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-50	-812	combination_of_known_splicesites	FALSE	canonical	3	74	junction_6	1050.71521937308	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97206683	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97219307
ES.6168.24	chr11	+	1445	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-50	-814	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_2	984.914333786426	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTGTGTTCTGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	97206683	97219932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212298_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.26	chr11	+	1446	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-47	-811	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_6	991.302132736204	978	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTTCTGTACATT	NA	False	NA	NA	False	AATAAA	-22	NA	97206686	97219935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218940_97219086_97219307
ES.6168.28	chr11	+	2318	6	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-41	-812	intron_retention	FALSE	canonical	3	74	junction_5	1136.33737947847	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97206692	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97217758_97219307
ES.6168.29	chr11	+	1229	2	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	11942	812	11750	-812	3prime_fragment	FALSE	canonical	3	2922	junction_1	0	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTGTTCTGTACAT	NA	False	NA	NA	False	AATAAA	-21	NA	97218483	97219934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97219086_97219307
ES.6168.3	chr11	+	2402	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	40	-11	40	11	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACTTTATCTTATTT	NA	False	NA	25	True	NA	NA	NA	97206581	97220757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.4	chr11	+	1561	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	66	804	66	-804	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTACATTTTCCCTG	NA	False	NA	NA	False	AATAAA	-29	NA	97206607	97219942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.5	chr11	+	1166	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	105	1160	-87	-1160	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGAGGTGTTCCGAT	NA	False	NA	NA	False	AAAAAG	-8	NA	97206646	97219586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ES.6168.6	chr11	+	1672	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-73	-814	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	1010.03465287088	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTGTGTTCTGTAC	NA	False	NA	NA	False	AATAAA	-19	NA	97206660	97219932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217433_97217758_97218911_97219086_97219307
ES.6168.9	chr11	+	3237	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-52	-813	intron_retention	FALSE	canonical	3	2561	junction_3	185.230487051493	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGTGTGTTCTGTACA	NA	False	NA	NA	False	AATAAA	-20	NA	97206681	97219933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97216584_97217607_97217758_97218911_97219086_97219307
ES.6169.1	chr11	+	177	1	Intergenic	novelGene_4991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	97232687	97232864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97232700_97232900
ES.6169.2	chr11	+	340	1	Intergenic	novelGene_4992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	97232688	97233028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97232700_97233000
ES.6169.3	chr11	+	450	1	Intergenic	novelGene_4993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAACACCAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	97232689	97233139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97232700_97233100
ES.617.1	chr1	+	4280	1	FSM	ENSMUSG00000084799.8	ENSMUST00000186786.2	1236	1	-649	-2395	369	2395	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGAGTACTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	63152605	63156885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63152600_63156900
ES.617.2	chr1	+	3473	2	Fusion	ENSMUSG00000101599.2_ENSMUSG00000084799.8	novel	652	2	NA	NA	-87	2395	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGAGTACTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	63153167	63156885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_63156537_63156781
ES.617.3	chr1	+	1064	2	Fusion	ENSMUSG00000101599.2_ENSMUSG00000084799.8	novel	652	2	NA	NA	-15	2395	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGAGTACTTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	63153614	63156885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_63154580_63156786
ES.6170.1	chr11	+	2446	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-220	4905	-220	-4905	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTAGTATTTACATTT	NA	False	NA	NA	False	NA	NA	NA	97253040	97284463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.10	chr11	+	2188	11	NNC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-117	-4912	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.4663547198048	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTAGCTTTTAGTATT	NA	False	NA	NA	False	NA	NA	NA	97253143	97284456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97253542_97253689_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.11	chr11	+	5208	6	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-6167	6484	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	15.6971334962789	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAAAATCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	97262095	97275977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97263957_97267262_97267368_97267822_97268513_97268761_97268893_97269368_97269538_97273725
ES.6170.12	chr11	+	1396	7	NIC	ENSMUSG00000038485.7	novel	506	3	NA	NA	-188	-4912	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	13.5973853695808	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTTAGCTTTTAGTATT	NA	False	NA	NA	False	NA	NA	NA	97268074	97284456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97268513_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.13	chr11	+	198	1	Intergenic	novelGene_4996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACTTAATTATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	97271973	97272171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97272000_97272200
ES.6170.14	chr11	+	4081	4	ISM	ENSMUSG00000038485.7	ENSMUST00000045540.4	7015	10	20347	1491	5461	-1491	3prime_fragment	FALSE	canonical	3	29	junction_3	1.24721912892465	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	97273723	97287877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.2	chr11	+	7347	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-217	1	-217	-1	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTACTTGGCTTTGTT	NA	False	NA	7	True	AATAAA	-15	NA	97253043	97289367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.3	chr11	+	5898	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-216	1449	-216	-1449	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGTGCCCCATTATG	NA	False	NA	NA	False	NA	NA	NA	97253044	97287919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.4	chr11	+	6469	10	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-216	-1466	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	11.9205186729479	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	AGTAAA	-39	NA	97253044	97287902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97268513_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.5	chr11	+	5793	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-213	-1449	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGTGCCCCATTATG	NA	False	NA	NA	False	NA	NA	NA	97253047	97287919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.6	chr11	+	2327	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-203	-4905	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTAGTATTTACATTT	NA	False	NA	NA	False	NA	NA	NA	97253057	97284463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.7	chr11	+	7212	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-183	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTTGGCTTTGTTT	NA	False	NA	8	True	AATAAA	-16	NA	97253077	97289368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.8	chr11	+	7335	11	NNC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-140	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7746404355571	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTACTTGGCTTTGTT	NA	False	NA	7	True	AATAAA	-15	NA	97253120	97289367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97254250_97258089_97258155_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6170.9	chr11	+	5564	8	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-131	-1491	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	12.7439461418081	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	97253129	97287877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97254250_97263891_97263957_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ES.6171.1	chr11	-	4585	5	Intergenic	novelGene_4982	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0.433012701892219	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAAATATTGA	5854	False	NA	NA	False	NA	NA	NA	97201155	97188392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97189490_97189695_97192549_97193059_97193134_97193294_97193362_97200661
ES.6171.10	chr11	-	176	1	Intergenic	novelGene_4995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97262253	97262077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97262100_97262300
ES.6171.2	chr11	-	178	1	Intergenic	novelGene_4983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97189695	97189517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97189500_97189700
ES.6171.3	chr11	-	178	2	Intergenic	novelGene_4984	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97262254	97189517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97189598_97262156
ES.6171.4	chr11	-	222	1	Intergenic	novelGene_4987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTCCCAGCATCCACAT	1610	False	NA	NA	False	NA	NA	NA	97205399	97205177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97205200_97205400
ES.6171.5	chr11	-	157	1	Intergenic	novelGene_4988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	97212061	97211904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97211900_97212100
ES.6171.6	chr11	-	298	1	Intergenic	novelGene_4989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCTCCACAGGCACGGC	NA	False	NA	NA	False	NA	NA	NA	97213767	97213469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97213500_97213800
ES.6171.7	chr11	-	177	1	Intergenic	novelGene_4990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97213769	97213592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97213600_97213800
ES.6171.8	chr11	-	178	1	Intergenic	novelGene_4994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGCTATATAAGAGCTT	NA	False	NA	NA	False	NA	NA	NA	97247407	97247229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97247200_97247400
ES.6171.9	chr11	-	6828	1	Antisense	novelGene_ENSMUSG00000038485.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCATTCCTGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	97267690	97260862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_97260900_97267700
ES.6172.1	chr11	-	184	1	Intergenic	novelGene_4997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAATTAAAAAGAAGATGA	7177	False	NA	NA	False	AATAAA	-14	NA	97277555	97277371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97277400_97277600
ES.6173.1	chr11	-	143	1	Intergenic	novelGene_4998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9998	False	NA	NA	False	NA	NA	NA	97277752	97277609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97277600_97277800
ES.6174.1	chr11	-	158	1	Intergenic	novelGene_4999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGAGA	NA	False	NA	NA	False	NA	NA	NA	97289968	97289810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97289800_97290000
ES.6175.1	chr11	+	5843	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11160	4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	10.5499083933345	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCGCTTGTTTGGATGG	NA	False	NA	18	True	AATAAA	-25	NA	97295198	97393232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.12	chr11	+	5496	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11098	-191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	14.086553939497	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTAAAGATGTTTTGC	NA	False	NA	NA	False	TATAAA	-12	NA	97295260	97393033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354442_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.13	chr11	+	6094	10	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11092	16472	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	13.7580503930348	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGAGGAGGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	97295266	97351526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97345039_97345152_97345271_97345330_97347280
ES.6175.14	chr11	+	4015	23	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11047	-8733	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	9.52595410722163	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGGAAAAGGAAAAGG	NA	False	NA	NA	False	AAAAAG	-39	NA	97295311	97384491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876
ES.6175.15	chr11	+	5617	24	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	2	-196	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_22	12.8358842463476	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATTTTTAAAGATGT	NA	False	NA	NA	False	TATAAA	-7	NA	97306360	97393028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
ES.6175.16	chr11	+	5810	24	FSM	ENSMUSG00000049807.17	ENSMUST00000121799.8	5816	24	5	1	5	1	multi-exon	FALSE	canonical	3	16	junction_1	11.2785659172316	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGTCTCGCTTGTTTG	NA	False	NA	13	True	AATAAA	-20	NA	97306363	97393227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.18	chr11	+	5668	24	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	19	-184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.5973040471258	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTTTGCTCATTTT	NA	False	NA	NA	False	TATAAA	-19	NA	97306377	97393040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338936_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.21	chr11	+	5636	23	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	15.8562759689438	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97306381	97393228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97345043_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
ES.6175.22	chr11	+	5805	24	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	16.8984512886427	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	NA	False	NA	10	True	AATAAA	-17	NA	97306388	97393224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365919_97366133_97366240_97366873_97367000_97380894_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.23	chr11	+	5538	24	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	15.0749858536488	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGTCTCGCTTGTTT	NA	False	NA	12	True	AATAAA	-19	NA	97306388	97393226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
ES.6175.25	chr11	+	5644	25	NNC	ENSMUSG00000049807.17	novel	5816	24	NA	NA	52	2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	12.8072651907683	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCGCTTGTTTGGAT	NA	False	NA	16	True	AATAAA	-23	NA	97306410	97393230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354337_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.27	chr11	+	5869	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-989	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3740713509034	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAACCAGTGTCTCGCT	NA	False	NA	7	True	AATAAA	-14	NA	97326121	97393221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97326317_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.28	chr11	+	6146	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	3886	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.9444063577528	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	1454	False	NA	14	True	AATAAA	-21	NA	97330996	97393228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97331462_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.29	chr11	+	6013	25	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	3893	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	14.1860161974938	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	1461	False	NA	10	True	AATAAA	-17	NA	97331003	97393224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97331462_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354337_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.3	chr11	+	5881	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11143	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0805138246165	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97295215	97393228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338936_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.30	chr11	+	5181	19	NNC	ENSMUSG00000049807.17	novel	5450	19	NA	NA	-1	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	18.8470124036466	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATGTTTTGCTCATTT	NA	False	NA	NA	False	TATAAA	-18	NA	97340984	97393039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97341192_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354442_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
ES.6175.31	chr11	+	5252	19	FSM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	12	186	12	-184	multi-exon	FALSE	canonical	1	1	junction_1	14.4501057281791	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTTTGCTCATTTT	NA	False	NA	NA	False	TATAAA	-19	NA	97340997	97393040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97341192_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.32	chr11	+	5245	18	ISM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	1231	0	-739	0	3prime_fragment	FALSE	canonical	3	33	junction_2	9.79266019892584	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGTCTCGCTTGTTT	NA	False	NA	12	True	AATAAA	-19	NA	97342216	97393226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.33	chr11	+	4508	17	NIC	ENSMUSG00000049807.17	novel	5450	19	NA	NA	-348	-188	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	14.9200996980583	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGATGTTTTGCTCA	NA	False	NA	NA	False	TATAAA	-15	NA	97342607	97393036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97343371_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.34	chr11	+	3892	18	NNC	ENSMUSG00000049807.17	novel	5450	19	NA	NA	308	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.6793821620898	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGTCTCGCTTGTTT	NA	False	NA	12	True	AATAAA	-19	NA	97343263	97393226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97343371_97344747_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.35	chr11	+	3545	15	NNC	ENSMUSG00000049807.17	novel	2409	3	NA	NA	10676	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.6418181543401	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAACCAGTGTCTCGC	NA	False	NA	6	True	AATAAA	-13	NA	97353631	97393220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97353681_97354209_97354337_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383873_97383909_97390934
ES.6175.36	chr11	+	3111	10	ISM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	15849	0	13879	0	3prime_fragment	FALSE	canonical	3	50	junction_4	5.55999822364302	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGTGTCTCGCTTGTTT	NA	False	NA	12	True	AATAAA	-19	NA	97356834	97393226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.37	chr11	+	2516	5	NNC	ENSMUSG00000049807.17	novel	2409	3	NA	NA	-1356	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.7628473821453	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACCAGTGTCTCGCTTG	4133	False	NA	9	True	AATAAA	-16	NA	97380613	97393223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97380670_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.38	chr11	+	2692	4	ISM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	39680	3	-1304	-1	3prime_fragment	FALSE	canonical	3	56	junction_2	5.90668171555645	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACCAGTGTCTCGCTTG	4185	False	NA	9	True	AATAAA	-16	NA	97380665	97393223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.4	chr11	+	5514	25	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11142	-181	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	12.2301426356723	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTGCTCATTTTAAA	NA	False	NA	NA	False	TATAAA	-22	NA	97295216	97393043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354337_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.6	chr11	+	5449	27	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11130	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.0506953700604	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	NA	False	NA	10	True	AATAAA	-17	NA	97295228	97393224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97322366_97322481_97322698_97322807_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934_97392284_97392861
ES.6175.7	chr11	+	5684	25	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11127	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	12.2301426356723	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97295231	97393228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354337_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6175.9	chr11	+	5550	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11120	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_11	13.3965263674788	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97295238	97393228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354458_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ES.6176.1	chr11	-	178	1	Intergenic	novelGene_5000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9373	False	NA	NA	False	NA	NA	NA	97300953	97300775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97300800_97301000
ES.6177.1	chr11	-	1330	1	Intergenic	novelGene_5001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	9334	False	NA	NA	False	NA	NA	NA	97306294	97304964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97305000_97306300
ES.6178.1	chr11	-	131	1	Intergenic	novelGene_5002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAGTAAAATA	7560	False	NA	NA	False	NA	NA	NA	97308068	97307937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97307900_97308100
ES.6179.1	chr11	-	641	1	Intergenic	novelGene_5003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	5851	False	NA	NA	False	NA	NA	NA	97309777	97309136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97309100_97309800
ES.618.1	chr1	-	6458	1	ISM	ENSMUSG00000040865.16	ENSMUST00000165066.8	13529	12	60009	0	9303	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTTTTATTAATTATT	2581	False	NA	0	True	AATAAA	-17	NA	63093417	63086959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_63087000_63093400
ES.618.2	chr1	-	4471	7	NNC	ENSMUSG00000040865.16	novel	13438	12	NA	NA	521	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3.09569593683445	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTTTTATTAATTATT	NA	False	NA	0	True	AATAAA	-17	NA	63152893	63086959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63090064_63118121_63118221_63124826_63125558_63132443_63132600_63132798_63132890_63144814_63144919_63152707
ES.618.3	chr1	-	5285	13	NNC	ENSMUSG00000040865.16	novel	13529	12	NA	NA	12	4035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.76385399196283	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAATTATGTTTGGTGTC	NA	False	NA	NA	False	TATAAA	-13	NA	63153402	63095258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63142151_63142231_63144814_63144919_63153369
ES.618.4	chr1	-	2082	5	ISM	ENSMUSG00000040865.16	ENSMUST00000153992.2	1795	10	13	22536	13	-22536	5prime_fragment	FALSE	canonical	1	2	junction_4	2.69258240356725	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTCATGGTAGTTCA	NA	False	NA	NA	False	NA	NA	NA	63153401	63123858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_63125558_63132443_63132600_63132798_63132890_63144814_63144919_63153369
ES.618.5	chr1	-	2064	5	NNC	ENSMUSG00000040865.16	novel	1795	10	NA	NA	6243	-22565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.24037034920393	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63147171	63123887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63125558_63132443_63132600_63132798_63132890_63144814_63144919_63147128
ES.618.6	chr1	-	1476	5	NNC	ENSMUSG00000040865.16	novel	1979	10	NA	NA	-32	-22572	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.29903810567666	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153458	63123894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63124982_63132443_63132549_63132798_63132890_63144814_63144919_63153369
ES.6180.1	chr11	-	3772	1	Genic_Genomic	ENSMUSG00000047988.2	novel	NA	NA	NA	NA	8130	2344	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATGCTACAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	97383036	97379264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97379300_97383000
ES.6181.1	chr11	-	198	1	Intergenic	novelGene_5004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATAAAAATGCTTATGG	NA	False	NA	NA	False	NA	NA	NA	97385018	97384820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97384800_97385000
ES.6182.1	chr11	-	6799	18	NNC	ENSMUSG00000038453.18	novel	7089	20	NA	NA	-10229	5	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	2.88775004909025	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGGGCTGTGCCTCG	2071	False	NA	NA	False	AATAAA	-31	NA	97438000	97400160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97403475_97409435_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.10	chr11	-	5273	17	NNC	ENSMUSG00000038453.18	novel	5726	19	NA	NA	-10100	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.93683503111768	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAAGAAAA	2200	False	NA	NA	False	NA	NA	NA	97437871	97407518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.11	chr11	-	3526	17	NNC	ENSMUSG00000038453.18	novel	5726	19	NA	NA	-10171	803	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.93683503111768	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGTCATGATGTCCT	2129	False	NA	NA	False	NA	NA	NA	97437942	97409336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.12	chr11	-	6364	16	NNC	ENSMUSG00000038453.18	novel	4493	19	NA	NA	-10195	1	intron_retention	FALSE	canonical	1	1	junction_9	2.72437556556034	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTCCCCCTTCCTGTCT	2105	False	NA	NA	False	AATAAA	-20	NA	97437966	97410138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.13	chr11	-	4374	18	NIC	ENSMUSG00000038453.18	novel	4493	19	NA	NA	84	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	3.08248764860562	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTCCCCCTTCCTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	97465957	97410139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97411000_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97442502_97442805_97465793
ES.6182.2	chr11	-	6969	19	NNC	ENSMUSG00000038453.18	novel	7089	20	NA	NA	-10327	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	3.18416219575713	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTCTTCCTGTGGGCT	1973	False	NA	NA	False	AATAAA	-23	NA	97438098	97400168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97403475_97409435_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437104_97437185_97437710
ES.6182.3	chr11	-	4561	18	NNC	ENSMUSG00000038453.18	novel	7089	20	NA	NA	-10137	1381	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	2.7964386644717	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGCCTCTATGATTTGA	2163	False	NA	NA	False	AGTAAA	-35	NA	97437908	97402303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97403475_97409435_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424036_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.4	chr11	-	4279	18	NNC	ENSMUSG00000038453.18	novel	7089	20	NA	NA	-10313	920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.88775004909025	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGTGGTTTTTCTTTC	1987	False	NA	NA	False	NA	NA	NA	97438084	97402764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97403475_97409435_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97437710
ES.6182.5	chr11	-	4044	2	ISM	ENSMUSG00000038453.18	ENSMUST00000238233.2	6624	15	15002	2599	15002	920	3prime_fragment	FALSE	canonical	3	4	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGTGGTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	97412769	97402764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97403475_97409435
ES.6182.6	chr11	-	2160	1	NIC	ENSMUSG00000038453.18	novel	6624	15	NA	NA	18252	130	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGTGTGGTCTCCTAC	NA	False	NA	NA	False	NA	NA	NA	97409519	97407359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97407400_97409500
ES.6182.7	chr11	-	4506	2	NNC	ENSMUSG00000087042.2	novel	1326	2	NA	NA	-480	3076	intron_retention	FALSE	canonical	1	1	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAATGTGTGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	97413201	97407361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97408102_97409435
ES.6182.8	chr11	-	5613	18	NIC	ENSMUSG00000038453.18	novel	5726	19	NA	NA	81	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.16118325706927	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGGGGAGGTTTGGAC	NA	False	NA	NA	False	AATAAA	-18	NA	97465960	97407486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97409583_97413198_97413322_97413915_97414069_97414282_97414438_97416166_97416402_97416833_97417081_97417354_97417503_97417607_97417739_97422629_97422806_97423847_97424039_97424290_97424335_97424577_97424671_97425256_97426120_97426559_97426654_97427133_97427333_97427869_97428066_97442502_97442805_97465793
ES.6183.1	chr11	+	133	1	Intergenic	novelGene_5005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	97470970	97471103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97471000_97471100
ES.6184.1	chr11	-	194	1	Intergenic	novelGene_5006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATGTCCTCT	NA	False	NA	NA	False	NA	NA	NA	97482130	97481936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97481900_97482100
ES.6185.1	chr11	+	158	1	Intergenic	novelGene_5007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGGGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	97484297	97484455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97484300_97484500
ES.6186.1	chr11	+	172	1	Intergenic	novelGene_5008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCCGGAGCAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	97485951	97486123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97486000_97486100
ES.6187.1	chr11	+	1295	2	NNC	ENSMUSG00000085860.2	novel	612	4	NA	NA	-237	-8530	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTTGTTTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	97489099	97501327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97489494_97500426
ES.6187.10	chr11	+	2791	2	Genic_Genomic	ENSMUSG00000085860.2	novel	612	4	NA	NA	5966	1015	multi-exon	TRUE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTGGAGAATCAAAAAT	NA	False	NA	23	True	AATAAA	-24	NA	97511773	97514734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_97512053_97512222
ES.6187.11	chr11	+	5179	1	Genic_Genomic	ENSMUSG00000085860.2	novel	NA	NA	NA	NA	6695	3962	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAGAGAGAA	NA	False	NA	NA	False	GATAAA	-25	NA	97512502	97517681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_97512500_97517700
ES.6187.2	chr11	+	1655	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-14	-1029	-14	1029	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCCATGGAAACTAT	NA	False	NA	37	True	AATAAA	-38	NA	97489322	97514748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ES.6187.3	chr11	+	2502	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-13	2230	-13	1632	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATAGACAAAGCCACGGG	NA	False	NA	NA	False	NA	NA	NA	97489323	97511489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97489494_97505749_97505855_97509262
ES.6187.4	chr11	+	3803	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-7	-3184	-7	3184	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACCCCGTGCTGATTT	NA	False	NA	NA	False	AATAAA	-32	NA	97489329	97516903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ES.6187.5	chr11	+	4733	5	NNC	ENSMUSG00000085860.2	novel	612	4	NA	NA	-1	389	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	55.8854855933095	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGACTCCAATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	97489335	97514108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97489494_97505749_97505855_97509262_97511280_97511485_97512253_97512422
ES.6187.6	chr11	+	613	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	29	True	AATATA	-14	NA	97489335	97513719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ES.6187.7	chr11	+	1107	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	2	3610	2	252	5prime_fragment	FALSE	canonical	3	106	junction_2	5.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	97489338	97510109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97489494_97505749_97505855_97509262
ES.6187.8	chr11	+	999	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	2	-389	2	389	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGACTCCAATTCTTTA	NA	False	NA	NA	False	NA	NA	NA	97489338	97514108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ES.6187.9	chr11	+	4713	3	ISM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	6	0	6	0	intron_retention	FALSE	canonical	3	106	junction_2	5.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	29	True	AATATA	-14	NA	97489342	97513719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97489494_97505749_97505855_97509262
ES.6188.1	chr11	+	2007	1	Antisense	novelGene_ENSMUSG00000043439.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATCGTCATCCTAAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	97519646	97521653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97519600_97521700
ES.6189.1	chr11	+	205	1	Intergenic	novelGene_5015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACACCCGTATAGAT	NA	False	NA	NA	False	NA	NA	NA	97537590	97537795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97537600_97537800
ES.619.1	chr1	+	1080	1	FSM	ENSMUSG00000101599.2	ENSMUST00000185480.2	9720	1	3849	4791	3849	-4791	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACGAACCATCTCTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	63160125	63161205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63160100_63161200
ES.6190.1	chr11	+	1026	1	Intergenic	novelGene_5020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAAGTGCCGGGCAT	7928	False	NA	NA	False	AAGAAA	-1	NA	97547825	97548851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97547800_97548900
ES.6191.1	chr11	-	1782	2	Genic_Genomic	ENSMUSG00002075001.1	novel	71	1	NA	NA	-30	64624	multi-exon	TRUE	non_canonical	0	0	junction_1	0	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCCAGCCTGATGTCA	NA	False	NA	NA	False	NA	NA	NA	97551183	97486458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97486469_97549411
ES.6191.10	chr11	-	200	1	Intergenic	novelGene_5013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGCAGTGGTGACACAC	9008	False	NA	NA	False	NA	NA	NA	97524153	97523953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97524000_97524200
ES.6191.11	chr11	-	174	1	Intergenic	novelGene_5014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGGATTTTGATCCC	7744	False	NA	NA	False	NA	NA	NA	97525417	97525243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97525200_97525400
ES.6191.12	chr11	-	1248	1	Intergenic	novelGene_5016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCATGGTGGCACATG	7523	False	NA	NA	False	NA	NA	NA	97539690	97538442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97538400_97539700
ES.6191.13	chr11	-	365	2	Intergenic	novelGene_5017	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	8210	False	NA	NA	False	NA	NA	NA	97539003	97538460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97538633_97538810
ES.6191.14	chr11	-	397	1	Intergenic	novelGene_5018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCGGGAGGCAGA	8211	False	NA	NA	False	NA	NA	NA	97539002	97538605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97538600_97539000
ES.6191.15	chr11	-	178	1	Intergenic	novelGene_5019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGC	8209	False	NA	NA	False	NA	NA	NA	97539004	97538826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97538800_97539000
ES.6191.2	chr11	-	257	1	Intergenic	novelGene_5009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAACAGAAAATAAT	NA	False	NA	NA	False	AATAAA	-14	NA	97489089	97488832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97488800_97489100
ES.6191.3	chr11	-	3180	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	-1588	12	multi-exon	FALSE	canonical	1	1	junction_1	0	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTCCGATTTATG	3353	False	NA	-1	True	AATAAA	-33	NA	97522116	97518202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97521354_97522087
ES.6191.4	chr11	-	2256	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	-62	5	multi-exon	FALSE	canonical	3	78	junction_1	0	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGAGGTCCTTGCCTCCG	4879	False	NA	-8	True	AATAAA	-26	NA	97520590	97518209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97518492_97518616
ES.6191.5	chr11	-	3197	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	-1359	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCTTTCGAGGTCCTT	3582	False	NA	-15	True	AATAAA	-19	NA	97521887	97518216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97521354_97521827
ES.6191.6	chr11	-	1979	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	-3	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	799	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCTTTCGAGGTCCTT	4938	False	NA	-15	True	AATAAA	-19	NA	97520531	97518216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97519978_97520313
ES.6191.7	chr11	-	177	1	Intergenic	novelGene_5010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATGCTGGGAA	9717	False	NA	NA	False	NA	NA	NA	97523444	97523267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97523300_97523400
ES.6191.8	chr11	-	488	1	Intergenic	novelGene_5011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATTTAAAAACAA	9009	False	NA	NA	False	AATATA	-25	NA	97524152	97523664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97523700_97524200
ES.6191.9	chr11	-	333	1	Intergenic	novelGene_5012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	9010	False	NA	NA	False	NA	NA	NA	97524151	97523818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97523800_97524200
ES.6192.1	chr11	+	4911	21	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	-669	614	intron_retention	FALSE	canonical	0	0	junction_13	5.85320425066476	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGTACAGATATATTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	97553570	97573971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97553655_97554368_97554507_97555780_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.10	chr11	+	2542	7	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	85	609	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	6.36177822799744	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACGTAGTACAGATATA	NA	False	NA	NA	False	AATAAA	-28	NA	97566962	97573966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569790_97569882_97571295_97571653_97572371
ES.6192.11	chr11	+	4002	5	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	570	614	intron_retention	FALSE	canonical	3	13	junction_2	2.54950975679639	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGTACAGATATATTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	97567447	97573971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97567886_97567973_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.12	chr11	+	5147	5	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	947	-20	intron_retention	FALSE	canonical	3	14	junction_4	1.87082869338697	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATCCAAAGA	NA	False	NA	-5	True	AATAAA	-14	NA	97567824	97576269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97567886_97567973_97568063_97569139_97569882_97571295_97571653_97572371
ES.6192.13	chr11	+	5214	3	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	2045	-20	intron_retention	FALSE	canonical	3	14	junction_2	2	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATCCAAAGA	NA	False	NA	-5	True	AATAAA	-14	NA	97568922	97576269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97569882_97571295_97571653_97572371
ES.6192.14	chr11	+	2651	2	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	6241	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTAAAAAAAGAAAATCCA	NA	False	NA	-9	True	AATAAA	-10	NA	97573118	97576265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97574982_97575477
ES.6192.15	chr11	+	1307	1	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	19362	1381	6724	-1381	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGGCTTTGGTCCATT	NA	False	NA	NA	False	NA	NA	NA	97573601	97574908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97573600_97574900
ES.6192.2	chr11	+	4905	20	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	44	609	intron_retention	FALSE	canonical	0	0	junction_12	5.2741989453599	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACGTAGTACAGATATA	NA	False	NA	NA	False	AATAAA	-28	NA	97554283	97573966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97554507_97555780_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566966_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.3	chr11	+	4052	22	NNC	ENSMUSG00000038437.12	novel	666	7	NA	NA	550	-2	intron_retention	FALSE	canonical	0	0	junction_12	6.57970493311081	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACCTTGCTTTGTCTGGC	NA	False	NA	13	True	AATAAA	-32	NA	97554947	97576287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97555055_97555780_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371_97572694_97575199_97575319_97575872
ES.6192.4	chr11	+	5092	18	NIC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	-105	609	intron_retention	FALSE	canonical	0	0	junction_11	5.11121976381846	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACGTAGTACAGATATA	NA	False	NA	NA	False	AATAAA	-28	NA	97555721	97573966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.5	chr11	+	4741	19	ISM	ENSMUSG00000038437.12	ENSMUST00000044730.12	7274	20	1482	2325	-105	607	3prime_fragment	FALSE	canonical	0	0	junction_11	4.97772817435603	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAACGTAGTACAGATA	NA	False	NA	NA	False	AATAAA	-26	NA	97555721	97573964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.6	chr11	+	4547	17	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	727	608	intron_retention	FALSE	canonical	0	0	junction_9	5.50993421013355	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACGTAGTACAGATAT	NA	False	NA	NA	False	AATAAA	-27	NA	97556553	97573965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97556666_97557615_97557720_97557900_97557995_97560252_97560463_97561078_97561178_97563282_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.7	chr11	+	6132	11	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	-3562	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.26212884676915	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGAGACCTTGCTTTG	NA	False	NA	7	True	AATAAA	-26	NA	97563315	97576281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97563419_97564285_97564898_97565263_97565446_97565599_97565709_97567207_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.8	chr11	+	4554	11	NNC	ENSMUSG00000038437.12	novel	7274	20	NA	NA	-2445	614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.27375485654325	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAGTACAGATATATTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	97564432	97573971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97568236_97569490_97569790_97569882_97571295_97571653_97572371
ES.6192.9	chr11	+	5414	10	ISM	ENSMUSG00000038437.12	ENSMUST00000107586.3	7206	20	10948	8	-1532	-8	3prime_fragment	FALSE	canonical	0	0	junction_2	5.61743318211757	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGAGACCTTGCTTTG	NA	False	NA	7	True	AATAAA	-26	NA	97565345	97576281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ES.6193.1	chr11	-	185	1	Intergenic	novelGene_5021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAGACAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	97558732	97558547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97558500_97558700
ES.6194.1	chr11	+	926	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	-187	-2	-60	2	multi-exon	FALSE	canonical	3	940	junction_1	75.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTTCTGTGGTCACTG	2265	False	NA	1	True	AATAAA	-23	NA	97576591	97579449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97577042_97577326_97577447_97579093
ES.6194.2	chr11	+	572	4	FSM	ENSMUSG00000078695.9	ENSMUST00000107584.8	546	4	-28	2	-28	-2	multi-exon	FALSE	canonical	3	33	junction_1	467.239410438232	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	2297	False	NA	-3	True	AATAAA	-19	NA	97576623	97579445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97576691_97577008_97577042_97577326_97577447_97579093
ES.6194.3	chr11	+	228	1	Genic_Genomic	ENSMUSG00000078695.9	novel	NA	NA	NA	NA	-20	-182	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2305	False	NA	NA	False	NA	NA	NA	97576631	97576859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_97576600_97576900
ES.6194.4	chr11	+	721	3	NNC	ENSMUSG00000078695.9	novel	737	3	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	62	junction_1	514.5	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	2447	False	NA	-3	True	AATAAA	-19	NA	97576773	97579445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97577042_97577345_97577447_97579093
ES.6194.5	chr11	+	2660	1	NIC	ENSMUSG00000078695.9	novel	546	4	NA	NA	7	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	2459	False	NA	-3	True	AATAAA	-19	NA	97576785	97579445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97576800_97579400
ES.6194.6	chr11	+	1930	3	NNC	ENSMUSG00000078695.9	novel	737	3	NA	NA	9	-2	intron_retention	FALSE	canonical	3	8	junction_2	466	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	2461	False	NA	-3	True	AATAAA	-19	NA	97576787	97579445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97577042_97577326_97577447_97577889
ES.6195.1	chr11	+	2622	1	Antisense	novelGene_ENSMUSG00000018537.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGAGACCGTCCCTGGGT	NA	False	NA	NA	False	TTTAAA	-14	NA	97590643	97593265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97590600_97593300
ES.6196.1	chr11	-	2367	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-22	2	-22	-2	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTGTGGTTCTTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	97590496	97579650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.10	chr11	-	3983	8	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-3274	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	74.8707730229976	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCAGATTAATTTAAA	NA	False	NA	35	True	AATATA	-19	NA	97586509	97580618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583388_97583551_97583649_97584241
ES.6196.11	chr11	-	2669	6	NIC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-1654	-1	intron_retention	FALSE	canonical	3	191	junction_5	18.0709711969224	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCAGATTAATTTAAA	NA	False	NA	35	True	AATATA	-19	NA	97584889	97580618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97583386_97583551
ES.6196.12	chr11	-	1567	11	NNC	ENSMUSG00000018537.17	novel	2485	11	NA	NA	1175	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.680307429043	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAACCAGATTAATTTAA	NA	False	NA	34	True	AATATA	-18	NA	97589035	97580619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581498_97581582_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97588814
ES.6196.13	chr11	-	5653	7	NIC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	2300	-3	intron_retention	FALSE	canonical	3	189	junction_4	14.544949486181	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCAACCAGATTAATTTA	NA	False	NA	33	True	AATATA	-17	NA	97587910	97580620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97581185_97581786_97582606_97582683_97582739_97582852_97583246_97583329_97583386_97583551_97583649_97584241
ES.6196.14	chr11	-	2846	7	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-5	-5	intron_retention	FALSE	canonical	0	0	junction_4	87.6801320457238	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAACCAGATTAATT	NA	False	NA	31	True	AATATA	-15	NA	97590479	97580622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97582602_97582683_97582739_97582852_97583246_97583329_97583381_97583551_97583649_97584241_97584395_97590361
ES.6196.15	chr11	-	1440	11	NNC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	82.2094885034568	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAACCAGATTAATT	NA	False	NA	31	True	AATATA	-15	NA	97590456	97580622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581421_97581507_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.17	chr11	-	7562	10	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	15	-6	intron_retention	FALSE	canonical	2	8	junction_9	65.5570621295809	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGACCAACCAGATTAAT	NA	False	NA	30	True	AATATA	-14	NA	97591308	97580623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97590475_97591085
ES.6196.18	chr11	-	4583	7	NIC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-3266	-5	intron_retention	FALSE	canonical	3	189	junction_4	8.88350531415762	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAATATACATACT	NA	False	NA	3	True	NA	NA	NA	97586501	97580650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241
ES.6196.2	chr11	-	4486	5	NIC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	28	-2	intron_retention	FALSE	canonical	3	83	junction_4	52.8411534696206	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCCTGTGGTTCTTTGG	NA	False	NA	-5	True	AATAAA	-15	NA	97590379	97579650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97582606_97582683_97582739_97582852_97583246_97583329_97584395_97590361
ES.6196.20	chr11	-	898	5	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	498	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.2874571258472	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAATATACATACT	NA	False	NA	3	True	NA	NA	NA	97582735	97580650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581421_97581550_97581786_97581875_97582509_97582606_97582683
ES.6196.21	chr11	-	1741	10	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	71.6676141194909	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAATATACATACT	NA	False	NA	3	True	NA	NA	NA	97590501	97580650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581786_97582237_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.23	chr11	-	1404	11	NNC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	-397	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.27177425835	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATGTACATAG	NA	False	NA	-18	True	NA	NA	NA	97590871	97580671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031_97590127_97590773
ES.6196.25	chr11	-	1561	10	NNC	ENSMUSG00000018537.17	novel	2485	11	NA	NA	33	-26	intron_retention	FALSE	non_canonical	0	0	junction_2	75.4806818552491	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATGTACATAG	NA	False	NA	-18	True	NA	NA	NA	97590374	97580671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581786_97581875_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031
ES.6196.26	chr11	-	1871	9	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	35	-26	intron_retention	FALSE	non_canonical	0	0	junction_1	86.9439474604184	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATGTACATAG	NA	False	NA	-18	True	NA	NA	NA	97590372	97580671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581875_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590321
ES.6196.27	chr11	-	1422	10	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	-41	-26	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	74.4383082048152	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATATGTACATAG	NA	False	NA	-18	True	NA	NA	NA	97590515	97580671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97583019_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.29	chr11	-	2655	2	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	53	20	intron_retention	FALSE	canonical	2	8	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGAGATTTTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	97591270	97588004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97590475_97591085
ES.6196.3	chr11	-	8683	3	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	632	2	intron_retention	FALSE	canonical	3	191	junction_2	9.5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGATTAATTTAAATGC	NA	False	NA	38	True	AATATA	-22	NA	97589578	97580615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97582739_97582852_97583386_97583551
ES.6196.4	chr11	-	1744	11	NNC	ENSMUSG00000018537.17	novel	1438	11	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	88.295016846932	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAGATTAATTTAAATGC	NA	False	NA	38	True	AATATA	-22	NA	97590384	97580615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581421_97581507_97581786_97582237_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.5	chr11	-	1442	10	FSM	ENSMUSG00000018537.17	ENSMUST00000169807.8	2347	10	-63	968	-63	1	multi-exon	FALSE	canonical	3	83	junction_9	43.2000800182158	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGATTAATTTAAATG	NA	False	NA	37	True	AATATA	-21	NA	97590537	97580616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361
ES.6196.8	chr11	-	1893	11	NNC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	-15	-1	intron_retention	FALSE	canonical	1	1	junction_6	94.4807387778059	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCAGATTAATTTAAA	NA	False	NA	35	True	AATATA	-19	NA	97590489	97580618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581392_97581507_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97583019_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031
ES.6196.9	chr11	-	1315	10	NNC	ENSMUSG00000018537.17	novel	2347	10	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	67.6857298453031	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCAGATTAATTTAAA	NA	False	NA	35	True	AATATA	-19	NA	97590372	97580618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590321
ES.6197.1	chr11	+	943	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	-167	-10	-167	10	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTTTGTTTCTGCAG	NA	False	NA	32	True	AATAAA	-25	NA	97594057	97604336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ES.6197.2	chr11	+	2780	4	ISM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	4	0	4	0	intron_retention	FALSE	canonical	3	3867	junction_2	81.4261765172737	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	False	NA	22	True	AATAAA	-15	NA	97594228	97604326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927
ES.6197.3	chr11	+	1888	5	NIC	ENSMUSG00000069744.8	novel	766	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3867	junction_2	83.5923890076124	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	False	NA	22	True	AATAAA	-15	NA	97594259	97604326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97603358_97604218
ES.6197.4	chr11	+	4928	5	NIC	ENSMUSG00000069744.8	novel	766	6	NA	NA	0	1	intron_retention	FALSE	canonical	3	3867	junction_2	190.377257045058	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594259	97604327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97594317_97594613_97594799_97597623_97602106_97603262_97603358_97604218
ES.6197.5	chr11	+	830	7	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	1920.4828747537	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	False	NA	22	True	AATAAA	-15	NA	97594261	97604326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604008_97604110_97604218
ES.6197.6	chr11	+	723	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1633.60746815139	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	False	NA	23	True	AATAAA	-16	NA	97594261	97604327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97594317_97594613_97594799_97597630_97597732_97601927_97602106_97603262_97603358_97604218
ES.6197.7	chr11	+	661	6	NNC	ENSMUSG00000069744.8	novel	766	6	NA	NA	24	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1633.22985522553	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCATGCCTGCCTGCCT	NA	False	NA	16	True	AATAAA	-9	NA	97594283	97604320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603368_97604268
ES.6197.8	chr11	+	879	6	NNC	ENSMUSG00000069744.8	novel	578	2	NA	NA	58	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1615.9615094426	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGCCTGCCTGCCT	NA	False	NA	20	True	AATAAA	-13	NA	97594317	97604324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97594525_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ES.6198.1	chr11	-	170	1	Intergenic	novelGene_5022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGATTTAGCA	NA	False	NA	NA	False	NA	NA	NA	97601647	97601477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97601500_97601600
ES.6199.1	chr11	+	214	1	Intergenic	novelGene_5025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAGAAAGAAAAAAAGAAAA	1867	False	NA	NA	False	NA	NA	NA	97631730	97631944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97631700_97631900
ES.62.1	chr1	+	3608	1	Antisense	novelGene_ENSMUSG00000025912.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAACAAAGCAGTTAACT	7373	False	NA	NA	False	NA	NA	NA	9734343	9737951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_9734300_9738000
ES.620.1	chr1	+	1626	1	FSM	ENSMUSG00000101599.2	ENSMUST00000185480.2	9720	1	8124	-30	8124	30	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAACAACAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	63164400	63166026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63164400_63166000
ES.6200.1	chr11	-	5108	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	-57	2	-57	-2	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTATGTGAGTCCTT	NA	False	NA	-7	True	AATAAA	-20	NA	97635587	97605984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ES.6200.2	chr11	-	1788	2	NNC	ENSMUSG00000018547.9	novel	5053	10	NA	NA	9374	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTGGTATGTGAGTCC	NA	False	NA	-9	True	AATAAA	-18	NA	97608195	97605986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97606503_97606923
ES.6200.3	chr11	-	3549	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	-2	1506	-2	-1506	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAAGTTTTCTTTCTCTT	NA	False	NA	-2	True	TTTAAA	-20	NA	97635532	97607488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ES.6200.5	chr11	-	3412	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	0	1641	0	-1641	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTTGTTGTTTTTTTGT	NA	False	NA	-24	True	NA	NA	NA	97635530	97607623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ES.6200.6	chr11	-	1073	8	NNC	ENSMUSG00000018547.9	novel	5053	10	NA	NA	12	-753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.66394502268034	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCTTTTTTGTTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	97635518	97611974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97612153_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ES.6200.7	chr11	-	153	2	Intergenic	novelGene_5023	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAGGAAAAAAAAAA	3923	False	NA	NA	False	AATAAA	-7	NA	97625808	97625400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97625408_97625662
ES.6200.8	chr11	-	157	1	Intergenic	novelGene_5024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTTCCTTCCTTCCT	3922	False	NA	NA	False	NA	NA	NA	97625809	97625652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97625700_97625800
ES.6200.9	chr11	-	2719	1	Genic_Genomic	ENSMUSG00000018547.9	novel	NA	NA	NA	NA	-52	-21642	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	NA	NA	NA	97635582	97632863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97632900_97635600
ES.6201.1	chr11	+	168	1	Intergenic	novelGene_5027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTTTCAAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	97649169	97649337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97649200_97649300
ES.6202.1	chr11	+	187	1	Intergenic	novelGene_5028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGATGACCTGGGGTTG	NA	False	NA	NA	False	NA	NA	NA	97651118	97651305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97651100_97651300
ES.6203.1	chr11	-	3288	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-48	-135	-48	1	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTTGGAGCAAGAATGA	7387	False	NA	0	True	AATAAA	-21	NA	97657430	97636305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.10	chr11	-	1484	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	1621	0	432	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTTGTCCACTGACTC	7435	False	NA	NA	False	NA	NA	NA	97657382	97638061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.12	chr11	-	1504	9	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	4	2088	4	-35	5prime_fragment	FALSE	canonical	3	107	junction_1	12.11339650965	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTTTTTCCAATGAAA	7439	False	NA	NA	False	AGTAAA	-15	NA	97657378	97638528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.13	chr11	-	158	1	Intergenic	novelGene_5026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATACATCTTTA	NA	False	NA	NA	False	NA	NA	NA	97640826	97640668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97640700_97640800
ES.6203.4	chr11	-	3140	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-18	-17	-18	17	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACGTGCCTGGTACTGA	7417	False	NA	-4	True	AATAAA	-36	NA	97657400	97636423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.5	chr11	-	5166	8	NIC	ENSMUSG00000018541.11	novel	3105	10	NA	NA	1	2	intron_retention	FALSE	canonical	3	107	junction_2	10.0833263057265	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGAGCGATCTACCA	7436	False	NA	-19	True	AATAAA	-21	NA	97657381	97636438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97638296_97638786_97638949_97641697_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.6	chr11	-	3037	10	NNC	ENSMUSG00000018541.11	novel	3105	10	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_4	35.8298447914274	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTAGAGCGATCTAC	7405	False	NA	-21	True	AATAAA	-19	NA	97657412	97636440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643492_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.7	chr11	-	2230	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-23	898	-23	-898	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCTGGCTAATTTTTA	7412	False	NA	NA	False	AAGAAA	-18	NA	97657405	97637338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6203.8	chr11	-	5997	6	NIC	ENSMUSG00000018541.11	novel	3105	10	NA	NA	-29	879	intron_retention	FALSE	canonical	3	107	junction_2	10.5147515424759	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTTGTTGGATGACCT	7406	False	NA	NA	False	AAAAAG	-14	NA	97657411	97637614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97638296_97638786_97638949_97641697_97644859_97646976_97648636_97654034_97654208_97657250
ES.6203.9	chr11	-	1942	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	-13	1176	-13	877	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATTTTGTTGGATGAC	7422	False	NA	NA	False	AAAAAG	-12	NA	97657395	97637616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ES.6204.1	chr11	-	1371	3	FSM	ENSMUSG00000018543.9	ENSMUST00000107576.2	624	3	40	-787	40	787	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAACCT	NA	False	NA	NA	False	NA	NA	NA	97666704	97661519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97662564_97663541_97663642_97666477
ES.6205.1	chr11	+	166	1	Intergenic	novelGene_5029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTTTTCGAGACA	6132	False	NA	NA	False	NA	NA	NA	97670284	97670450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97670300_97670400
ES.6206.1	chr11	-	1007	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	53	-1	-2	1	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGAGTGCTTGAGAA	NA	False	NA	-8	True	AATAAA	-18	NA	97673210	97668351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ES.6206.10	chr11	-	3444	4	NIC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	6	2	intron_retention	FALSE	canonical	3	11120	junction_3	1393.64039678662	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGTCTTCTTGACAC	NA	False	NA	-33	True	ATTAAA	-13	NA	97673202	97668861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97668991_97669090_97672289_97672631_97672716_97673169
ES.6206.13	chr11	-	3089	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5758.22685381533	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGGTCTTCTTGACAC	NA	False	NA	-33	True	ATTAAA	-13	NA	97673240	97668861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97668991_97669090_97670504_97670896_97672289_97672631_97672716_97673169
ES.6206.15	chr11	-	735	5	FSM	ENSMUSG00000071415.7	ENSMUST00000151118.2	728	5	-8	1	-8	-1	multi-exon	FALSE	canonical	3	20	junction_4	6071.74712809254	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGAGCTGGTCTTCTTGA	NA	False	NA	-36	True	ATTAAA	-10	NA	97673110	97668864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97672828
ES.6206.16	chr11	-	2598	3	Fusion	ENSMUSG00000064901.3_ENSMUSG00000071415.7	novel	480	2	NA	NA	-38	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	6719.5	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGAGCTGGTCTTCTTGA	NA	False	NA	-36	True	ATTAAA	-10	NA	97673140	97668864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_97668991_97669090_97670504_97672081
ES.6206.17	chr11	-	314	3	NIC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	385	5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	6718	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCTGCTCTGAGAGC	NA	False	NA	-48	True	AATATA	-7	NA	97672717	97668876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97668991_97669090_97669205_97672631
ES.6206.2	chr11	-	756	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	9	294	9	217	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAAACAGCCGGG	NA	False	NA	-17	True	NA	NA	NA	97673254	97668646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ES.6206.3	chr11	-	633	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	-30	456	-30	55	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCAGTTCAGGGCATG	NA	False	NA	20	True	NA	NA	NA	97673293	97668808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ES.6206.4	chr11	-	505	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	-3	18	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_2	5723.09009080759	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTCCAATATCAGC	NA	False	NA	-17	True	ATTAAA	-29	NA	97673211	97668845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97668991_97669090_97669196_97672159_97672289_97672631_97672716_97673169
ES.6206.5	chr11	-	3448	4	NNC	ENSMUSG00000071415.7	novel	728	5	NA	NA	-7	5	intron_retention	FALSE	canonical	0	0	junction_2	6586.18437842934	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTCTTGACACCTT	NA	False	NA	-30	True	ATTAAA	-16	NA	97673195	97668858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97668991_97669090_97670498_97670943_97672289_97672631
ES.6206.6	chr11	-	497	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	23	4	at_least_one_novel_splicesite	FALSE	canonical	3	613	junction_3	5440.57875482931	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTTCTTGACACCT	NA	False	NA	-31	True	ATTAAA	-15	NA	97673240	97668859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97668991_97669090_97669205_97672159_97672257_97672631_97672716_97673169
ES.6206.7	chr11	-	3902	2	Fusion	ENSMUSG00002075586.1_ENSMUSG00000071415.7	novel	658	2	NA	NA	6	4	intron_retention	FALSE	canonical	0	0	junction_1	0	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTTCTTGACACCT	NA	False	NA	-31	True	ATTAAA	-15	NA	97673202	97668859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_97670498_97670938
ES.6207.1	chr11	+	317	1	Intergenic	novelGene_5030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATTCTTCTGTAAG	9188	False	NA	NA	False	AATACA	-6	NA	97673340	97673657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97673300_97673700
ES.6208.1	chr11	+	178	1	Intergenic	novelGene_5031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	97681828	97682006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97681800_97682000
ES.6208.2	chr11	+	357	1	Intergenic	novelGene_5032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACTTGCCATAAGAAC	NA	False	NA	NA	False	NA	NA	NA	97681830	97682187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97681800_97682200
ES.6209.1	chr11	+	128	1	Intergenic	novelGene_5033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGCCAAAAAAAAAAAA	244	False	NA	NA	False	NA	NA	NA	97686178	97686306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97686200_97686300
ES.621.1	chr1	+	5396	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTCTGCTGTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	63169983	63175379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63170000_63175400
ES.621.2	chr1	+	2731	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	63170732	63173463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63170700_63173500
ES.6210.1	chr11	+	3775	8	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	-117	2	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	226.43285259585	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCCTCTTTGAC	3774	False	NA	12	True	AATAAA	-23	NA	97689708	97729592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97690024_97690472_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.10	chr11	+	3354	8	NNC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	229.040233521162	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCGGACTAGGCTTCTT	4582	False	NA	2	True	AATAAA	-13	NA	97690516	97729582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897_97728738_97728789
ES.6210.11	chr11	+	3169	5	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	67	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	262.666137901329	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTAGGCTTCTTCCTC	4630	False	NA	6	True	AATAAA	-17	NA	97690564	97729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97690689_97697650_97697746_97724371_97724529_97724909_97725014_97726897
ES.6210.12	chr11	+	3406	7	NNC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	240.969857497203	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCGGACTAGGCTTCTT	4711	False	NA	2	True	AATAAA	-13	NA	97690645	97729582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724658_97724909_97725014_97726897
ES.6210.13	chr11	+	3316	7	NIC	ENSMUSG00000038366.16	novel	376	5	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	241.808062084143	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	5056	False	NA	8	True	AATAAA	-19	NA	97690990	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97691067_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.14	chr11	+	5101	7	NIC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	239.383931513096	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	5167	False	NA	10	True	AATAAA	-21	NA	97691101	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97692961_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.15	chr11	+	4076	7	NIC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	242.501374566551	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	5172	False	NA	10	True	AATAAA	-21	NA	97691106	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97691941_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.16	chr11	+	4322	8	NNC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	320.266152072406	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTAGGCTTCTTCCTCT	5177	False	NA	7	True	AATAAA	-18	NA	97691111	97729587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97691941_97697650_97697746_97706523_97706609_97714783_97715038_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.17	chr11	+	4124	7	NNC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	239.037944454199	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTAGGCTTCTTCCTC	5182	False	NA	6	True	AATAAA	-17	NA	97691116	97729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97692003_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.18	chr11	+	3503	8	NNC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	283.239424213105	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTAGGCTTCTTCCTCT	5218	False	NA	7	True	AATAAA	-18	NA	97691152	97729587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97691203_97691788_97692003_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.19	chr11	+	3517	8	NNC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	283.457947786379	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTAGGCTTCTTCCTC	5219	False	NA	6	True	AATAAA	-17	NA	97691153	97729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97691219_97691788_97692003_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.2	chr11	+	3884	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	-324	-20	241	20	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGAAGTAACTTCTGT	4132	False	NA	30	True	AATAAA	-41	NA	97690066	97729610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.20	chr11	+	3457	8	NIC	ENSMUSG00000038366.16	novel	1207	5	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	285.607551492232	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	5219	False	NA	8	True	AATAAA	-19	NA	97691153	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97691219_97691788_97691941_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.21	chr11	+	3352	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-1035	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.501374566551	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	9048	False	NA	10	True	AATAAA	-21	NA	97694982	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97695093_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.22	chr11	+	3291	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	223.557350335186	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	NA	False	NA	8	True	AATAAA	-19	NA	97697080	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697132_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.23	chr11	+	3283	7	NIC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	237.309221621636	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697130	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97697172_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.24	chr11	+	3760	6	ISM	ENSMUSG00000038366.16	ENSMUST00000148280.3	686	7	1116	-2646	-2	1	3prime_fragment	FALSE	canonical	3	479	junction_5	97.3829553874804	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	NA	False	NA	11	True	AATAAA	-22	NA	97697133	97729591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.25	chr11	+	3297	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	224.925913728647	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	97697133	97729589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.26	chr11	+	3278	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	282.11502776153	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTAGGCTTCTTCCTC	NA	False	NA	6	True	AATAAA	-17	NA	97697138	97729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724920_97725014_97726897
ES.6210.27	chr11	+	3392	8	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	312.452445361282	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTAGGCTTCTTCCTCT	NA	False	NA	7	True	AATAAA	-18	NA	97697138	97729587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97714935_97715038_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.28	chr11	+	3476	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	223.899344944702	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697139	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697374_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.29	chr11	+	4683	1	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	28	3701	mono-exon	FALSE	NA	NA	NA	NA	NA	714	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATGGTTTTTCATCTTG	NA	False	NA	NA	False	TTTAAA	-41	NA	97697163	97701846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97697200_97701800
ES.6210.3	chr11	+	5357	6	ISM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	68	-1	-39	1	intron_retention	FALSE	canonical	3	499	junction_3	74.0988528926056	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	4524	False	NA	11	True	AATAAA	-22	NA	97690458	97729591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909
ES.6210.30	chr11	+	3440	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	225.610775944373	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697348	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697547_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.31	chr11	+	3353	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	231.791333363054	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697357	97729590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697469_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.33	chr11	+	3451	6	NNC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	108	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	255.905138674471	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	NA	False	NA	8	True	AATAAA	-19	NA	97697435	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97697746_97706523_97706609_97715667_97715776_97724371_97724533_97724917_97725014_97726897
ES.6210.34	chr11	+	3129	4	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	241	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	274.656553211865	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	NA	False	NA	8	True	AATAAA	-19	NA	97697568	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97697746_97724371_97724529_97724909_97725014_97726897
ES.6210.35	chr11	+	3505	5	ISM	ENSMUSG00000038366.16	ENSMUST00000148280.3	686	7	10144	-2641	88	-4	3prime_fragment	FALSE	canonical	3	479	junction_4	90.3807916539792	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGACTAGGCTTCTTCCTC	2737	False	NA	6	True	AATAAA	-17	NA	97706161	97729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.36	chr11	+	3246	6	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	120	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.019672679563	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	2769	False	NA	8	True	AATAAA	-19	NA	97706193	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97706295_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.37	chr11	+	3097	4	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-6419	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	274.656553211865	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTAGGCTTCTTCCTCT	NA	False	NA	7	True	AATAAA	-18	NA	97717589	97729587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97717736_97724371_97724529_97724909_97725014_97726897
ES.6210.38	chr11	+	3480	2	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-3521	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGCTGAGCTTGTCATG	NA	False	NA	NA	False	NA	NA	NA	97720487	97724156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97722323_97722511
ES.6210.40	chr11	+	4288	3	FSM	ENSMUSG00000038366.16	ENSMUST00000127575.2	758	3	-970	-2560	-970	1	multi-exon	FALSE	canonical	3	479	junction_2	85.5	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	NA	False	NA	11	True	AATAAA	-22	NA	97723038	97729591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97724529_97724909_97725014_97726897
ES.6210.5	chr11	+	3327	6	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	257.547354868964	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	4560	False	NA	9	True	AATAAA	-20	NA	97690494	97729589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97690689_97697650_97697746_97706523_97706609_97724371_97724529_97724909_97725014_97726897
ES.6210.6	chr11	+	3382	8	NNC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	229.040233521162	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTAGGCTTCTTCCTCTT	4561	False	NA	8	True	AATAAA	-19	NA	97690495	97729588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897_97728188_97728238
ES.6210.7	chr11	+	3308	6	NNC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.019672679563	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTCTTCCTCTTT	4561	False	NA	9	True	AATAAA	-20	NA	97690495	97729589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97690671_97706536_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6210.8	chr11	+	6464	6	ISM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	105	-1145	-2	1145	intron_retention	FALSE	canonical	3	499	junction_3	74.0988528926056	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAGAAAGGGGGTTA	4561	False	NA	NA	False	NA	NA	NA	97690495	97730735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909
ES.6210.9	chr11	+	1027	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	109	2404	2	155	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCGCCCCTCCAGCTTA	4565	False	NA	NA	False	NA	NA	NA	97690499	97727186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ES.6211.1	chr11	-	176	1	Intergenic	novelGene_5034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTGTTTTTAAT	5878	False	NA	NA	False	NA	NA	NA	97722505	97722329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97722300_97722500
ES.6212.1	chr11	+	1102	2	FSM	ENSMUSG00000050538.9	ENSMUST00000155954.3	2181	2	14	1065	-1	-9	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAGAAAAAAAG	5324	False	NA	NA	False	NA	NA	NA	97732139	97733860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97732391_97733009
ES.6212.2	chr11	+	1109	2	FSM	ENSMUSG00000050538.9	ENSMUST00000170806.2	1118	2	0	9	0	-9	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAACAAGAAAAAAAG	5329	False	NA	NA	False	NA	NA	NA	97732144	97733860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97732403_97733009
ES.6213.1	chr11	+	175	1	Intergenic	novelGene_5037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTTTTTAAAAATTA	3350	False	NA	NA	False	NA	NA	NA	97771396	97771571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97771400_97771600
ES.6214.1	chr11	-	5179	9	NNC	ENSMUSG00000070336.4	novel	2162	11	NA	NA	-245	3519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.93649167310371	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGGAAATATTTCTTTT	7189	False	NA	NA	False	AATAAA	-21	NA	97775225	97741132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97745315_97746178_97746339_97746981_97747125_97748493_97748641_97754184_97754362_97755884_97755994_97759417_97759496_97763683_97763761_97775119
ES.6214.2	chr11	-	7390	2	Genic_Genomic	ENSMUSG00000070336.4	novel	2162	11	NA	NA	-6117	3511	multi-exon	FALSE	non_canonical	0	0	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTTTAATCTGGAAATA	NA	False	NA	NA	False	AATAAA	-13	NA	97752495	97741140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_97743423_97747387
ES.6214.3	chr11	-	3763	11	NNC	ENSMUSG00000070336.4	novel	2162	11	NA	NA	57	3507	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.95959179422654	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAGTTTAATCTGGA	7491	False	NA	NA	False	AATAAA	-9	NA	97774923	97741144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97742064_97743741_97745315_97746178_97746339_97746981_97747125_97748493_97748641_97754184_97754362_97755884_97755994_97759417_97759496_97763683_97763761_97770209_97770415_97774748
ES.6214.4	chr11	-	5667	11	FSM	ENSMUSG00000070336.4	ENSMUST00000093939.4	2162	11	2	-3507	2	3507	multi-exon	FALSE	canonical	0	0	junction_10	1.84661853126194	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTAAGTTTAATCTGGA	7436	False	NA	NA	False	AATAAA	-9	NA	97774978	97741144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97745315_97746178_97746339_97746981_97747125_97748493_97748641_97754184_97754362_97755884_97755994_97759417_97759496_97763683_97763761_97768782_97768954_97770209_97770415_97774748
ES.6214.5	chr11	-	208	1	Intergenic	novelGene_5035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTCTTAAAAGATAC	NA	False	NA	NA	False	NA	NA	NA	97756428	97756220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97756200_97756400
ES.6214.6	chr11	-	165	1	Intergenic	novelGene_5036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACATTTATCATGT	9053	False	NA	NA	False	NA	NA	NA	97757488	97757323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97757300_97757500
ES.6214.7	chr11	-	391	1	Intergenic	novelGene_5038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	9831	False	NA	NA	False	NA	NA	NA	97772037	97771646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97771600_97772000
ES.6215.1	chr11	+	1156	1	Genic_Genomic	ENSMUSG00000086917.2	novel	NA	NA	NA	NA	-45	-8107	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTTACATGACTTTTT	7328	False	NA	NA	False	NA	NA	NA	97775374	97776530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_97775400_97776500
ES.6216.1	chr11	+	134	1	Intergenic	novelGene_5039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4697	False	NA	NA	False	NA	NA	NA	97785496	97785630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97785500_97785600
ES.6217.1	chr11	-	2331	1	Intergenic	novelGene_5040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTGGCTAGATTCTAT	NA	False	NA	NA	False	NA	NA	NA	97811719	97809388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97809400_97811700
ES.6218.1	chr11	+	244	1	Intergenic	novelGene_5041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAGA	8125	False	NA	NA	False	NA	NA	NA	97823855	97824099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97823900_97824100
ES.6219.1	chr11	+	164	1	Intergenic	novelGene_5043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACTAGAAAGGGTG	2349	False	NA	NA	False	NA	NA	NA	97843669	97843833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97843700_97843800
ES.622.1	chr1	-	87	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTCCAGTCCACT	7466	False	NA	NA	False	NA	NA	NA	63171411	63171324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63171300_63171400
ES.6220.1	chr11	+	179	1	Intergenic	novelGene_5045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	97857013	97857192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97857000_97857200
ES.6221.1	chr11	+	160	1	Intergenic	novelGene_5046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3605	False	NA	NA	False	NA	NA	NA	97863588	97863748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97863600_97863700
ES.6222.10	chr11	-	2033	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	108	740	63	-322	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTCTGGCCTTGGTC	6968	False	NA	NA	False	NA	NA	NA	97877162	97814803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
ES.6222.11	chr11	-	2780	9	ISM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	0	13632	0	-27	5prime_fragment	FALSE	canonical	3	23	junction_4	7.68114574786861	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGATAAATCTT	6860	False	NA	NA	False	NA	NA	NA	97877270	97827695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
ES.6222.12	chr11	-	173	1	Intergenic	novelGene_5042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	97836738	97836565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97836600_97836700
ES.6222.13	chr11	-	5968	1	NIC	ENSMUSG00000017417.15	novel	2881	14	NA	NA	30457	-13132	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAACCAAACAAGTAGTC	8780	False	NA	NA	False	NA	NA	NA	97846768	97840800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97840800_97846800
ES.6222.14	chr11	-	136	1	Intergenic	novelGene_5044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	2496	False	NA	NA	False	NA	NA	NA	97853052	97852916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97852900_97853100
ES.6222.15	chr11	-	784	2	NNC	ENSMUSG00000017417.15	novel	2881	14	NA	NA	-223	-5917	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCAGATTCCTCACAA	6637	False	NA	NA	False	AATAAA	-18	NA	97877493	97874998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97875353_97877063
ES.6222.16	chr11	-	559	2	NNC	ENSMUSG00000017417.15	novel	2881	14	NA	NA	-6	-5917	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCAGATTCCTCACAA	6854	False	NA	NA	False	AATAAA	-18	NA	97877276	97874998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97875345_97877063
ES.6222.4	chr11	-	3118	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	-238	1	-238	-1	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCGTCGCGCCTGCGTGT	6622	False	NA	-8	True	AATAAA	-16	NA	97877508	97814064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
ES.6222.5	chr11	-	3990	2	ISM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	58011	1	57966	-1	3prime_fragment	FALSE	canonical	3	29	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCGTCGCGCCTGCGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	97819259	97814064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97815434_97816638
ES.6222.7	chr11	-	3609	3	ISM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	55930	3	55885	-3	3prime_fragment	FALSE	canonical	3	28	junction_2	0.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCGTCGCGCCTGCGT	8589	False	NA	-10	True	AATAAA	-14	NA	97821340	97814066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97815434_97816638_97816800_97819259
ES.6222.8	chr11	-	2393	14	NNC	ENSMUSG00000017417.15	novel	2439	14	NA	NA	4	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.2289802010496	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCAGAGTCGAGTTCT	6909	False	NA	NA	False	NA	NA	NA	97877221	97814526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97815434_97816638_97816800_97819259_97819299_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847414_97869328_97869508_97877063
ES.6223.1	chr11	+	181	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTCTTACCAGATGC	215	False	NA	13	True	NA	NA	NA	97884802	97884983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97884800_97885000
ES.6224.1	chr11	-	1290	6	NNC	ENSMUSG00000038352.16	novel	1571	6	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.05941170815567	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	-1	True	ATTAAA	-22	NA	97886749	97880407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97881166_97883107_97883260_97884250_97884316_97885163_97885312_97885892_97885954_97886643
ES.6224.2	chr11	-	1289	6	FSM	ENSMUSG00000038352.16	ENSMUST00000042971.16	1571	6	278	4	26	-4	multi-exon	FALSE	canonical	1	2	junction_2	2.57681974534503	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	-1	True	ATTAAA	-22	NA	97886729	97880407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886643
ES.6224.3	chr11	-	1375	6	NNC	ENSMUSG00000038352.16	novel	1571	6	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.13687742827162	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGCCTCACTTCTTATT	NA	False	NA	-1	True	ATTAAA	-22	NA	97887005	97880407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97881166_97883107_97883260_97884250_97884335_97885163_97885312_97885892_97885954_97886833
ES.6224.4	chr11	-	1161	5	NIC	ENSMUSG00000038352.16	novel	1571	6	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.39116499156263	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGCCTCACTTCTTAT	NA	False	NA	-2	True	ATTAAA	-21	NA	97886754	97880408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97881166_97884250_97884335_97885163_97885312_97885892_97885954_97886643
ES.6225.1	chr11	+	150	1	Antisense	novelGene_ENSMUSG00000020882.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATACAAAAGCGACGGG	NA	False	NA	NA	False	ATTAAA	-39	NA	97903758	97903908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97903800_97903900
ES.6226.1	chr11	+	999	7	NNC	ENSMUSG00000017404.13	novel	737	6	NA	NA	-4185	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7512.42499130607	1143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTTTGGCTGCTGTGT	NA	False	NA	12	True	AATAAA	-30	NA	97913350	97921315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97913482_97917401_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.10	chr11	+	687	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	5	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6298.41575636287	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCCTCTTGTTTAGCAG	NA	False	NA	-3	True	AATAAA	-15	NA	97917787	97921300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97917817_97918648_97918756_97919179_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.12	chr11	+	3512	1	FSM	ENSMUSG00002076889.1	ENSMUST00020182364.1	80	1	-2447	-985	-2447	985	mono-exon	FALSE	NA	NA	NA	NA	NA	1142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917791	97921303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97917800_97921300
ES.6226.13	chr11	+	2325	3	NIC	ENSMUSG00000017404.13	novel	751	6	NA	NA	12	-14	intron_retention	FALSE	canonical	3	16596	junction_1	120	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTGTTTAGCAGTTTT	NA	False	NA	1	True	AATAAA	-19	NA	97917794	97921304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97919295_97920220_97920342_97920600
ES.6226.14	chr11	+	1523	5	ISM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	274	0	27	0	3prime_fragment	FALSE	canonical	3	13947	junction_4	1138.33373291843	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917809	97921318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.15	chr11	+	707	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	32	-15	at_least_one_novel_splicesite	FALSE	canonical	3	1515	junction_1	5824.77595792319	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917814	97921303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97917853_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.16	chr11	+	1143	6	NNC	ENSMUSG00000017404.13	novel	737	6	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	6412.05157808326	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTTTGGCTGCTGTGT	NA	False	NA	12	True	AATAAA	-30	NA	97917818	97921315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97918281_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.18	chr11	+	1346	3	NIC	ENSMUSG00000017404.13	novel	737	6	NA	NA	864	-15	intron_retention	FALSE	canonical	3	13947	junction_2	1324.5	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97918646	97921303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97919295_97920220_97920712_97921096
ES.6226.2	chr11	+	913	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	-162	0	52	0	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917587	97921318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.4	chr11	+	670	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	-8	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6422.31984254911	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTGTTTAGCAGTTTT	NA	False	NA	1	True	AATAAA	-19	NA	97917774	97921304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97917817_97918690_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ES.6226.5	chr11	+	2046	4	NIC	ENSMUSG00000017404.13	novel	751	6	NA	NA	-1	-15	intron_retention	FALSE	canonical	3	9068	junction_1	3205.77232850716	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGTTTAGCAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	97917781	97921303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_97917817_97918648_97920342_97920600_97920712_97921096
ES.6226.8	chr11	+	493	5	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	1	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	6176.67800581348	1142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCTCTTGTTTAGCAGT	NA	False	NA	-2	True	AATAAA	-16	NA	97917783	97921301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_97917817_97918648_97918756_97919171_97919248_97920639_97920712_97921096
ES.6227.1	chr11	-	3377	13	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-7	-6	combination_of_known_junctions	TRUE	canonical	2	14	junction_1	28.323895486948	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCCTGTTTTCTTT	NA	False	NA	-6	True	TATAAA	-27	NA	97913467	97892339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.10	chr11	-	2020	13	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	26	131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	34.6145441493409	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTTGGGGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	97913427	97893595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.11	chr11	-	3218	11	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	63	junction_9	14.7651616990807	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913464	97895750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.12	chr11	-	3147	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-9	0	intron_retention	FALSE	canonical	2	13	junction_5	28.7982437481039	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913469	97895750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.13	chr11	-	3607	10	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	63	junction_8	15.475986974649	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913475	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.14	chr11	-	2869	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	28	junction_6	21.5379733847143	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913484	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.15	chr11	-	2289	12	NIC	ENSMUSG00000020882.18	novel	1745	13	NA	NA	-3	-1	intron_retention	FALSE	canonical	2	13	junction_5	29.5419578350399	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913463	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.16	chr11	-	1720	12	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-3	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	22.8711807541917	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.17	chr11	-	1875	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	4	1	-3	-1	multi-exon	FALSE	canonical	3	20	junction_6	26.3832596335041	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913456	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.18	chr11	-	3960	9	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	63	junction_7	16.1535599791501	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913455	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896610_97900106_97900259_97900394_97900505_97900683_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.19	chr11	-	2010	12	NNC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	32.9788311767583	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTCTGGTGTCTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	97913458	97895751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97901199_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.2	chr11	-	4866	12	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-8	-7	intron_retention	FALSE	canonical	2	14	junction_1	24.7242645229003	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTGTTTTCTT	NA	False	NA	-7	True	TATAAA	-26	NA	97913468	97892340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.21	chr11	-	7613	7	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	63	junction_5	9.58586922969894	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTCTGGTGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	97913476	97895752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97900505_97900683_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.22	chr11	-	1753	12	NNC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.5490266637148	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGTCTGGTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	97913456	97895753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97900946_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.23	chr11	-	1756	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	-14	3	-14	-3	multi-exon	FALSE	canonical	3	23	junction_7	26.3358384884341	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGTCTGGTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	97913474	97895753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.24	chr11	-	1868	13	NNC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	34.2219065642008	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGTCTGGTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	97913458	97895753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97900978_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.25	chr11	-	6519	10	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-179	-3	intron_retention	FALSE	canonical	2	13	junction_5	27.0801280154532	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCGTCTGGTGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	97913639	97895753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902769_97903010_97903148_97903637_97903761_97907548_97910593_97913167
ES.6227.26	chr11	-	794	3	NNC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-15	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	46.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCGTCTGGTGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	97913475	97895754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97896141_97896513_97896610_97913163
ES.6227.27	chr11	-	3472	11	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	22	-5	intron_retention	FALSE	canonical	2	13	junction_5	26.1725046566048	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCAGCGTCTGGTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	97913431	97895755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.28	chr11	-	2933	12	NIC	ENSMUSG00000020882.18	novel	1745	13	NA	NA	4	-20	intron_retention	FALSE	canonical	3	25	junction_6	22.1978332648232	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGGTGAGCGGCA	NA	False	NA	NA	False	NA	NA	NA	97913449	97895770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.29	chr11	-	3919	5	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	-2	-1956	intron_retention	FALSE	canonical	3	68	junction_3	6.28490254498827	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCGTTCCATTCACTTC	NA	False	NA	NA	False	NA	NA	NA	97913455	97902441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97902769_97903010_97903148_97903637_97903761_97907548_97910593_97913167
ES.6227.3	chr11	-	5233	11	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	3	-8	intron_retention	FALSE	canonical	2	14	junction_1	25.9246986482003	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGAGCCTGTTTTCT	NA	False	NA	-8	True	TATAAA	-25	NA	97913457	97892341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.4	chr11	-	3530	14	NIC	ENSMUSG00000020882.18	novel	2236	14	NA	NA	-7	-8	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	30.0524196861764	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGAGCCTGTTTTCT	NA	False	NA	-8	True	TATAAA	-25	NA	97913467	97892341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.5	chr11	-	3386	14	FSM	ENSMUSG00000020882.18	ENSMUST00000017552.13	3396	14	2	8	2	-8	multi-exon	FALSE	canonical	2	14	junction_1	30.0140006777902	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGAGCCTGTTTTCT	NA	False	NA	-8	True	TATAAA	-25	NA	97913458	97892341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.6	chr11	-	4533	14	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-5	-11	combination_of_known_junctions	FALSE	canonical	2	13	junction_6	32.9448166901193	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTCCTGAGCCTGTTT	NA	False	NA	-11	True	TATAAA	-22	NA	97913465	97892344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97901203_97901452_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.7	chr11	-	4780	13	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-7	-16	intron_retention	FALSE	canonical	2	13	junction_6	32.0975076914081	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGGCCACCTCCTGAGCC	NA	False	NA	-16	True	TATAAA	-17	NA	97913467	97892349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.8	chr11	-	4955	13	NNC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-15	-17	intron_retention	FALSE	canonical	0	0	junction_7	35.7650512216729	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGGCCACCTCCTGAGC	NA	False	NA	-17	True	TATAAA	-16	NA	97913475	97892350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97902492_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ES.6227.9	chr11	-	3234	10	NIC	ENSMUSG00000020882.18	novel	3396	14	NA	NA	-466	-17	combination_of_known_junctions	FALSE	canonical	2	13	junction_6	37.6448642243419	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGGCCACCTCCTGAGC	NA	False	NA	-17	True	TATAAA	-16	NA	97903843	97892350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97900829_97901203_97902691_97902769_97903010_97903148_97903637
ES.6228.1	chr11	+	1043	1	Antisense	novelGene_ENSMUSG00000017400.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	97934422	97935465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97934400_97935500
ES.6229.1	chr11	-	3373	13	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	111	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	19.1229574072631	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGCTTGGTGTATCT	5470	False	NA	-1	True	ATTAAA	-16	NA	97944177	97927447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97938570_97938952_97939187_97939240_97943718
ES.6229.10	chr11	-	1315	1	NIC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	86	-11964	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGCGGAGCCCAGAC	5445	False	NA	NA	False	AATAAA	-14	NA	97944202	97942887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97942900_97944200
ES.6229.11	chr11	-	1241	2	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	41	-11964	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAGGCGGAGCCCAGAC	5400	False	NA	NA	False	AATAAA	-14	NA	97944247	97942887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97943600_97943718
ES.6229.2	chr11	-	3069	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	-19	0	-19	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5340	False	NA	-2	True	ATTAAA	-15	NA	97944307	97927448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ES.6229.3	chr11	-	3647	10	NIC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	28	0	intron_retention	FALSE	canonical	3	38	junction_2	4.84831649539365	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5387	False	NA	-2	True	ATTAAA	-15	NA	97944260	97927448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97934613_97943718
ES.6229.4	chr11	-	3034	13	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3568463340494	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGCCTGCTTGGTGTA	5404	False	NA	-4	True	ATTAAA	-13	NA	97944243	97927450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97928897_97930444_97930583_97930681_97930830_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934450_97934566_97934613_97943718
ES.6229.5	chr11	-	2773	12	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	118	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.4858358508118	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGCCTGCTTGGTGTA	5477	False	NA	-4	True	ATTAAA	-13	NA	97944170	97927450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718_97943869_97944025
ES.6229.6	chr11	-	2932	11	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	134	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.1424891727022	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGCCTGCTTGGTGTA	5493	False	NA	-4	True	ATTAAA	-13	NA	97944154	97927450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97928897_97930444_97930583_97930905_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ES.6229.8	chr11	-	2835	12	NNC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	95	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.4858358508118	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTGCCTGCTTGGTGT	5454	False	NA	-5	True	ATTAAA	-12	NA	97944193	97927451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934450_97934566_97934613_97943718
ES.6229.9	chr11	-	3306	10	NIC	ENSMUSG00000017400.11	novel	3050	11	NA	NA	82	-3	intron_retention	FALSE	canonical	3	31	junction_8	6.11010092660779	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCTGCCTGCTTGGTGT	5441	False	NA	-5	True	ATTAAA	-12	NA	97944206	97927451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97928897_97930444_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ES.623.1	chr1	+	2401	3	NNC	ENSMUSG00000084799.8	novel	1576	4	NA	NA	24269	0	intron_retention	FALSE	canonical	1	3	junction_1	3	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATGAGCTTTATATGC	414	False	NA	NA	False	AATAAA	-13	NA	63178167	63197449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63178431_63183277_63183345_63195378
ES.623.2	chr1	+	2072	3	NNC	ENSMUSG00000084799.8	novel	1576	4	NA	NA	25120	-150	intron_retention	FALSE	canonical	0	0	junction_1	4.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTCTGGTGAATTAAA	548	False	NA	NA	False	AATAAA	-16	NA	63179018	63197299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63179103_63183277_63183345_63195378
ES.623.3	chr1	+	110	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACTAAAAAAAAAAA	1137	False	NA	NA	False	NA	NA	NA	63179607	63179717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63179600_63179700
ES.623.4	chr1	+	252	1	Antisense	novelGene_ENSMUSG00000025968.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGAAACAAAAAACAAAAC	5556	False	NA	NA	False	NA	NA	NA	63184026	63184278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_63184000_63184300
ES.623.5	chr1	+	129	2	Antisense	novelGene_ENSMUSG00000025968.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	5557	False	NA	NA	False	NA	NA	NA	63184027	63184257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_63184131_63184231
ES.6230.1	chr11	-	840	1	Intergenic	novelGene_5047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAATAAAAATA	6803	False	NA	NA	False	NA	NA	NA	97948486	97947646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97947600_97948500
ES.6231.1	chr11	+	6848	1	Intergenic	novelGene_5048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGCTCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	97957248	97964096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97957200_97964100
ES.6231.2	chr11	+	5500	1	Intergenic	novelGene_5049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGCGTTTTTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	97958355	97963855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97958400_97963900
ES.6231.3	chr11	+	5378	2	Intergenic	novelGene_5051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCTGACCGTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	97958417	97963844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97958956_97959004
ES.6231.4	chr11	+	2992	2	Intergenic	novelGene_5052	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCTGACCGTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	97958523	97963844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97959948_97962276
ES.6231.5	chr11	+	3528	1	Intergenic	novelGene_5053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCATCGATTGTATCA	NA	False	NA	NA	False	NA	NA	NA	97958542	97962070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97958500_97962100
ES.6232.1	chr11	-	1855	1	Intergenic	novelGene_5050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAAACCCAGGGAGGACT	NA	False	NA	NA	False	NA	NA	NA	97960270	97958415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_97958400_97960300
ES.6233.1	chr11	+	4683	1	Antisense	novelGene_ENSMUSG00000020883.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGAAGACAGTGATCAAAT	NA	False	NA	NA	False	AAAAAG	-8	NA	97979754	97984437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97979800_97984400
ES.6234.1	chr11	+	3125	1	Antisense	novelGene_ENSMUSG00000020883.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGTTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	97989237	97992362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_97989200_97992400
ES.6234.2	chr11	+	158	1	Intergenic	novelGene_5054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	97991996	97992154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_97992000_97992200
ES.6235.1	chr11	+	157	1	Intergenic	novelGene_5055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2574	False	NA	NA	False	NA	NA	NA	98003254	98003411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98003300_98003400
ES.6236.1	chr11	+	178	1	Intergenic	novelGene_5056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGTTTACACCCT	7523	False	NA	NA	False	NA	NA	NA	98008203	98008381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98008200_98008400
ES.6237.1	chr11	+	3890	1	Antisense	novelGene_ENSMUSG00000018160.16_AS_novelGene_ENSMUSG00000020883.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAACTAG	NA	False	NA	NA	False	NA	NA	NA	98040545	98044435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_98040500_98044400
ES.6238.1	chr11	+	1314	1	Intergenic	novelGene_5057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAATCTAACTCCCTCTT	NA	False	NA	NA	False	NA	NA	NA	98049613	98050927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98049600_98050900
ES.6239.1	chr11	+	4369	6	Antisense	novelGene_ENSMUSG00000018160.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCAGGGATGCTGATAA	NA	False	NA	NA	False	NA	NA	NA	98057523	98067938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_98057649_98058343_98058457_98060188_98060277_98061771_98061847_98062520_98062597_98064046
ES.6239.2	chr11	+	5930	1	Antisense	novelGene_ENSMUSG00000018160.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCCAGGGATGCTGAT	3715	False	NA	NA	False	NA	NA	NA	98062006	98067936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_98062000_98067900
ES.624.1	chr1	+	176	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAGAATAACTA	NA	False	NA	NA	False	NA	NA	NA	63197541	63197717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63197500_63197700
ES.6240.1	chr11	-	8479	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-18	10	intron_retention	TRUE	canonical	0	0	junction_1	50.559096335103	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCCTGTGGAAACAGCC	2356	False	NA	0	True	ATTAAA	-25	NA	98041247	97973371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978634_97978774_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
ES.6240.10	chr11	-	2458	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	7	6136	1	2399	multi-exon	FALSE	canonical	3	137	junction_5	8.14567620374923	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACCCTGCCTGAATCT	3172	False	NA	-4	True	AATAAA	-28	NA	98040431	97979517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.11	chr11	-	2503	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-47	2399	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	36.7548414137095	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACCCTGCCTGAATCT	2327	False	NA	-4	True	AATAAA	-28	NA	98041276	97979517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
ES.6240.12	chr11	-	4119	13	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	20	2399	intron_retention	FALSE	canonical	3	12	junction_11	39.8339435099709	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACCCTGCCTGAATCT	3191	False	NA	-4	True	AATAAA	-28	NA	98040412	97979517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040141
ES.6240.13	chr11	-	3687	14	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	24	2388	intron_retention	FALSE	canonical	0	0	junction_2	41.8749900644694	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	3195	False	NA	-15	True	AATAAA	-17	NA	98040408	97979528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97980525_97981483_97983017_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.14	chr11	-	3436	13	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-89	2386	intron_retention	FALSE	canonical	3	12	junction_11	52.7467745196066	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	2285	False	NA	-17	True	AATAAA	-15	NA	98041318	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040941
ES.6240.15	chr11	-	4173	14	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	8	2386	intron_retention	FALSE	canonical	3	142	junction_8	6.90767517558266	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	3179	False	NA	-17	True	AATAAA	-15	NA	98040424	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.16	chr11	-	2296	15	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	335	2386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	40.5324888584605	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	7231	False	NA	-17	True	AATAAA	-15	NA	98019438	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98019297
ES.6240.17	chr11	-	2175	15	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-29	2386	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	39.5235011462439	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	3136	False	NA	-17	True	AATAAA	-15	NA	98040467	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040447
ES.6240.18	chr11	-	5135	13	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-46	2386	intron_retention	FALSE	canonical	3	15	junction_12	39.4711568391683	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	2328	False	NA	-17	True	AATAAA	-15	NA	98041275	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97980525_97981483_97981697_97982970_97983984_97985958_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
ES.6240.19	chr11	-	2488	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	1	2386	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	52.9584323366502	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	3172	False	NA	-17	True	AATAAA	-15	NA	98040431	97979530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_97992764_97992808_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.2	chr11	-	8449	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	5	2	intron_retention	TRUE	canonical	0	0	junction_1	39.1946708395698	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTCCCTGTGG	3176	False	NA	-8	True	ATTAAA	-17	NA	98040427	97973379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978718_97978860_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.21	chr11	-	2694	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-9	2385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	52.8374446349893	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTACCATCAGGGGA	3156	False	NA	-18	True	AATAAA	-14	NA	98040447	97979531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98035357_98035592_98040141
ES.6240.23	chr11	-	2397	14	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-1	2385	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	38.3036760328971	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTACCATCAGGGGA	3164	False	NA	-18	True	AATAAA	-14	NA	98040439	97979531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040141
ES.6240.24	chr11	-	3353	6	ISM	ENSMUSG00000020883.19	ENSMUST00000135969.8	4028	12	0	15697	0	2730	5prime_fragment	FALSE	canonical	3	146	junction_3	7.863841300535	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	3171	False	NA	NA	False	NA	NA	NA	98040432	97997613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.25	chr11	-	4242	1	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	-10966	2730	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	98001855	97997613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_97997600_98001900
ES.6240.26	chr11	-	2758	7	NNC	ENSMUSG00000020883.19	novel	428	6	NA	NA	-17	2730	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.4313462297611	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	3148	False	NA	NA	False	NA	NA	NA	98040455	97997613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97998884_97999501_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.27	chr11	-	3272	6	NNC	ENSMUSG00000020883.19	novel	428	6	NA	NA	-243	2706	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	61.6395976625416	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2922	False	NA	NA	False	NA	NA	NA	98040681	97997637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040447
ES.6240.28	chr11	-	6347	1	Genic_Genomic	ENSMUSG00000020883.19	novel	NA	NA	NA	NA	-33	-15316	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTTATTTTATGTGA	3132	False	NA	NA	False	NA	NA	NA	98040471	98034124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_98034100_98040500
ES.6240.29	chr11	-	3307	1	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	19	-18298	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATACACTTTATTTTAT	3190	False	NA	NA	False	ATTAAA	-8	NA	98040413	98037106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98037100_98040400
ES.6240.3	chr11	-	8432	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	19	0	intron_retention	TRUE	canonical	0	0	junction_1	39.1946708395698	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTTCATTTCCCTGT	3190	False	NA	-10	True	ATTAAA	-15	NA	98040413	97973381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978752_97978895_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.4	chr11	-	8446	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	6	-2	intron_retention	FALSE	canonical	0	0	junction_1	39.1946708395698	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTTTTCATTTCCCT	3177	False	NA	-12	True	ATTAAA	-13	NA	98040426	97973383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978634_97978774_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.5	chr11	-	6503	2	NNC	ENSMUSG00000084896.2	novel	674	2	NA	NA	-3775	1899	intron_retention	TRUE	canonical	0	0	junction_1	0	159	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGACTTTTCATTTCCCT	8690	False	NA	-12	True	ATTAAA	-13	NA	97980025	97973383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978650_97978788
ES.6240.6	chr11	-	3906	1	ISM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	62999	152	13450	-152	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTAGACGATTCTTTT	8989	False	NA	NA	False	AATAAA	-13	NA	97977439	97973533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_97973500_97977400
ES.6240.7	chr11	-	3601	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	19	3701	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.1946708395698	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTGTGTTTTTATTCCT	3190	False	NA	3	True	ATTAAA	-44	NA	98040413	97978215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978634_97978774_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.8	chr11	-	5310	15	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	18	3674	intron_retention	FALSE	canonical	0	0	junction_1	40.5283977034395	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTATGCTCTTTTGAA	3189	False	NA	-24	True	ATTAAA	-17	NA	98040414	97978242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978634_97978774_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6240.9	chr11	-	3551	16	NNC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	19	3673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.8225541054408	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTATGCTCTTTTGA	3190	False	NA	-25	True	ATTAAA	-16	NA	98040413	97978243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_97978634_97978774_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987776_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ES.6241.1	chr11	-	8024	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	1	-1	1	0	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084118	98042979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.11	chr11	-	2812	18	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	1	-8	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084118	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.12	chr11	-	7791	18	NNC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	62.5929343658368	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084108	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057630_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.14	chr11	-	7978	17	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	1	-8	intron_retention	FALSE	canonical	1	2	junction_6	61.9727762812027	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084101	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057630_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.16	chr11	-	4574	18	NNC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.7901088703588	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084105	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98045733_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054822_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.17	chr11	-	6685	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	18	1321	1	-465	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGCAAGAAAAGTTATC	NA	False	NA	NA	False	AATAAA	-22	NA	98084101	98044301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.18	chr11	-	2012	1	ISM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	37526	1601	5255	492	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGATTCATGTTTGTGT	6848	False	NA	NA	False	AAAACA	-10	NA	98046593	98044581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98044600_98046600
ES.6241.19	chr11	-	6050	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	0	1974	0	119	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCCATAGTTCACTTAAA	NA	False	NA	NA	False	GATAAA	-19	NA	98084119	98044954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.2	chr11	-	11357	17	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	7	0	intron_retention	FALSE	canonical	3	134	junction_1	34.9497407000395	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084112	98042979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98074747_98080007_98080115_98083884
ES.6241.20	chr11	-	3544	2	NNC	ENSMUSG00000018160.16	novel	609	3	NA	NA	2899	-62	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTCTCCTACTTCCA	4492	False	NA	NA	False	TATAAA	-15	NA	98048949	98045135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98045733_98046002
ES.6241.21	chr11	-	5675	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	7	2342	7	-249	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAACTATTATCT	NA	False	NA	NA	False	NA	NA	NA	98084112	98045322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.22	chr11	-	5529	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	0	2495	0	-402	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATGTTTGTTCCTAAA	NA	False	NA	NA	False	NA	NA	NA	98084119	98045475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.23	chr11	-	4937	18	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	4	-783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.2418999135179	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGCAATGAATAAATTA	NA	False	NA	NA	False	NA	NA	NA	98084098	98045856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074663_98074747_98080007_98080115_98083884
ES.6241.24	chr11	-	4090	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	-2	-1632	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCAAGGTCTCTGCTTC	NA	False	NA	NA	False	GATAAA	-4	NA	98084104	98046705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.25	chr11	-	2931	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	7	5086	7	512	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGAGGTGACAATGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	98084112	98048066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.27	chr11	-	2740	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	1	509	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCTTGGAGGTGACAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	98084118	98048069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.28	chr11	-	2553	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	8	329	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATAGTGATTCTCCTACC	NA	False	NA	27	True	NA	NA	NA	98084111	98048249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.29	chr11	-	2382	17	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	-7	293	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	61.2846840572749	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCTGACCTTATTGCA	NA	False	NA	-9	True	AATGAA	-14	NA	98084109	98048285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.3	chr11	-	3938	18	NNC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	60.1339335599952	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084111	98042979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98045076_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.30	chr11	-	2711	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	8	5305	8	293	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCTGACCTTATTGCA	NA	False	NA	-9	True	AATGAA	-14	NA	98084111	98048285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.31	chr11	-	2880	19	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	-8	293	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	71.4696689529685	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCTGACCTTATTGCA	NA	False	NA	-9	True	AATGAA	-14	NA	98084110	98048285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98060902_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.32	chr11	-	2511	18	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	8	293	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	62.8210508433737	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCTGACCTTATTGCA	NA	False	NA	-9	True	AATGAA	-14	NA	98084111	98048285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069943_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.33	chr11	-	2583	18	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	1	291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	61.8941500721093	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCAGCTGACCTTATTG	NA	False	NA	-11	True	AATGAA	-12	NA	98084118	98048287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080176_98083884
ES.6241.34	chr11	-	4160	16	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	7	291	intron_retention	FALSE	canonical	3	176	junction_3	33.1340710850126	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCAGCTGACCTTATTG	NA	False	NA	-11	True	AATGAA	-12	NA	98084112	98048287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.35	chr11	-	4048	13	ISM	ENSMUSG00000018160.16	ENSMUST00000018304.7	5845	17	10993	3220	-1966	285	intron_retention	FALSE	canonical	3	176	junction_3	20.5689896040942	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACTGATCCAGCTGACC	NA	False	NA	-17	True	AATGAA	-6	NA	98072788	98048293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842
ES.6241.37	chr11	-	2582	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	7	5435	7	163	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACGAGTGATGACTG	NA	False	NA	NA	False	NA	NA	NA	98084112	98048415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.38	chr11	-	1951	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	7	6066	7	-468	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCGGCATGAGTCGGTGG	NA	False	NA	NA	False	NA	NA	NA	98084112	98049046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.39	chr11	-	2062	15	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	4	-2738	combination_of_known_splicesites	FALSE	canonical	2	2	junction_9	66.0827017409833	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCACTGTTGCCTCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	98084098	98051316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.4	chr11	-	7741	18	NNC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	77.394911449908	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084109	98042979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98045733_98046002_98049296_98051762_98051865_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.42	chr11	-	1367	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	4	1	4	-1	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAGGACTTTGCATATT	NA	False	NA	NA	False	AATAAA	-14	NA	98084098	98060737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.5	chr11	-	7906	16	NIC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	-4	0	intron_retention	FALSE	canonical	2	10	junction_1	61.6581976166457	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084106	98042979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98049296_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.7	chr11	-	2643	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	-25	9	8	-8	multi-exon	FALSE	canonical	3	35	junction_1	53.6447367918524	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084111	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.8	chr11	-	2705	18	NNC	ENSMUSG00000018160.16	novel	2627	18	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	57.1448714425007	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084111	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98043852_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6241.9	chr11	-	8358	18	NNC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	5	-8	intron_retention	FALSE	canonical	1	1	junction_8	72.0297900693834	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAATGTGCCTCTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98084097	98042988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98060902_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ES.6242.1	chr11	+	8229	14	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-343	1977	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	25.4502647595533	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTGCATTGCATTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	98093541	98144367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.10	chr11	+	5680	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	-284	516	-284	4	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGACAAAAGTTATGTCC	NA	False	NA	3	True	AATAAA	-21	NA	98093600	98141874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.11	chr11	+	5707	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	-560	-4	-284	4	multi-exon	FALSE	canonical	3	27	junction_13	22.2330315590945	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGACAAAAGTTATGTCC	NA	False	NA	3	True	AATAAA	-21	NA	98093600	98141874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.12	chr11	+	4386	14	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-284	-198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.6823038860726	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTCTCCGTAACTC	NA	False	NA	67	True	AATAAA	-21	NA	98093600	98142192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98094195_98101756_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.14	chr11	+	4147	11	ISM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-534	4399	-279	-4399	5prime_fragment	FALSE	canonical	3	57	junction_1	13.7127677731376	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACCAAA	NA	False	NA	NA	False	NA	NA	NA	98093605	98133131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523
ES.6242.15	chr11	+	5370	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-534	1	-279	-1	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCTGTTCTCTATGAT	NA	False	NA	NA	False	AATACA	-18	NA	98093605	98137529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ES.6242.18	chr11	+	7151	18	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-275	975	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	38.9009032904971	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTCTATTAATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	98093609	98170305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.19	chr11	+	5232	18	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-275	-947	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	36.4238790072902	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATCTCCAGGCCCCTA	NA	False	NA	NA	False	NA	NA	NA	98093609	98168383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.2	chr11	+	8258	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	-619	-2496	-343	1976	multi-exon	TRUE	canonical	3	27	junction_13	22.2330315590945	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCTGCATTGCATTT	NA	False	NA	NA	False	ATTAAA	-20	NA	98093541	98144366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.20	chr11	+	9523	6	NNC	ENSMUSG00000003119.15	novel	4837	13	NA	NA	-275	4018	intron_retention	FALSE	non_canonical	0	0	junction_5	37.1827917187508	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATTATGTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	98093609	98120366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98119168_98119377
ES.6242.21	chr11	+	5186	17	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-275	-596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	39.7255722897732	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTACTCTCCTTATGTC	NA	False	NA	NA	False	NA	NA	NA	98093609	98168734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98154295_98154397_98155025_98155134_98158577_98158685_98168196
ES.6242.22	chr11	+	6036	14	NNC	ENSMUSG00000003119.15	novel	2605	8	NA	NA	-275	1975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.6823038860726	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCTGCATTGCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	98093609	98144365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98093703_98101778_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.23	chr11	+	5770	17	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-268	-11	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	38.1262294883719	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	98093616	98169319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.25	chr11	+	6747	17	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-267	971	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	39.0094139279226	290	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGTAGTCTATTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	98093617	98170301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98154295_98154397_98155019_98155130_98158577_98158685_98168196
ES.6242.26	chr11	+	6969	15	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-266	1973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7470495380458	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTTTGCTGCATTGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	98093618	98144363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98093896_98095077_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.27	chr11	+	8070	15	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-266	1974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7470495380458	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTGCATTGCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	98093618	98144364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98093642_98093723_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.30	chr11	+	6298	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-517	-944	-262	944	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACATTTATTTACCTC	NA	False	NA	NA	False	AATAAA	-19	NA	98093622	98138474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ES.6242.31	chr11	+	5143	14	NNC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-262	-535	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	29.0500486306613	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGTTGTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	98093622	98141335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.32	chr11	+	4908	15	NNC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-261	-397	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.8065237471769	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTCAATTGAAAAATAAT	NA	False	NA	NA	False	AATATA	-14	NA	98093623	98141473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98093675_98094046_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.34	chr11	+	8116	13	NIC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-259	1975	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	33.7304470109063	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCTGCATTGCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	98093625	98144365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.36	chr11	+	4824	17	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-256	-945	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	38.1262294883719	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCTCCAGGCCCCTATT	NA	False	NA	NA	False	NA	NA	NA	98093628	98168385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.37	chr11	+	8767	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	-197	-2658	-197	2658	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATGTCTGACATTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	98093687	98145048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.39	chr11	+	6113	18	NIC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-140	42	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	37.8082944342598	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGTTTCTCTGTGTGG	NA	False	NA	NA	False	AAAAAG	-29	NA	98093744	98169372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.4	chr11	+	6036	14	NNC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-296	-196	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	29.0500486306613	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTCCGTAACTCTT	NA	False	NA	69	True	AATAAA	-23	NA	98093588	98142194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.40	chr11	+	7873	13	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-46	1972	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	30.7254870678327	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTTTTGCTGCATTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	98093838	98144362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.41	chr11	+	3636	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	517	684	496	-684	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTAGTGGAGTGGATCC	NA	False	NA	NA	False	AATAAA	-17	NA	98094656	98136846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ES.6242.42	chr11	+	7029	13	NNC	ENSMUSG00000003119.15	novel	4837	13	NA	NA	630	-1494	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	24.3424640403464	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGTTTTTTTCCTTTT	NA	False	NA	NA	False	CATAAA	-15	NA	98094790	98140376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ES.6242.43	chr11	+	205	1	Intergenic	novelGene_5058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTAATGGAACTGAGTA	NA	False	NA	NA	False	NA	NA	NA	98097327	98097532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98097300_98097500
ES.6242.44	chr11	+	5175	13	ISM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	7329	-642	7053	642	3prime_fragment	FALSE	canonical	3	54	junction_12	14.0356688476182	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTGAATATTTCTTTA	NA	False	NA	NA	False	ATTAAA	-33	NA	98101213	98143032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.46	chr11	+	5878	13	ISM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	7096	-1881	7096	1361	3prime_fragment	FALSE	canonical	3	27	junction_12	20.9090291501064	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTAGTAATCTGGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	98101256	98143751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ES.6242.48	chr11	+	4888	1	Intergenic	novelGene_5060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98103006	98107894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98103000_98107900
ES.6242.49	chr11	+	6597	5	NNC	ENSMUSG00000003119.15	novel	4837	13	NA	NA	-2582	3983	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	41.9068908414833	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98108644	98120331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98110077_98111839_98111980_98113453_98113625_98115267_98119168_98119377
ES.6242.50	chr11	+	4825	6	ISM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	33645	-1977	-5033	1977	3prime_fragment	FALSE	canonical	3	54	junction_5	21.235818797494	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCTGCATTGCATTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	98127529	98144367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.51	chr11	+	4589	5	NNC	ENSMUSG00000003119.15	novel	5143	14	NA	NA	-25	1974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.599356218729	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTGCATTGCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	98132537	98144364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98132656_98134186_98134399_98136042_98136496_98140508_98143810_98143859
ES.6242.52	chr11	+	6861	5	NIC	ENSMUSG00000003119.15	novel	2605	8	NA	NA	3930	971	intron_retention	FALSE	canonical	3	9	junction_1	4.76313972081441	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATGTAGTCTATTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	98136492	98170301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.53	chr11	+	7392	1	NIC	ENSMUSG00000003119.15	novel	2605	8	NA	NA	4782	2346	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	98137344	98144736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98137300_98144700
ES.6242.54	chr11	+	6173	1	NIC	ENSMUSG00000003119.15	novel	2605	8	NA	NA	5630	1975	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCTGCATTGCATT	NA	False	NA	NA	False	ATTAAA	-19	NA	98138192	98144365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98138200_98144400
ES.6242.55	chr11	+	7934	1	Intergenic	novelGene_5062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAGTTGGAAAACCA	NA	False	NA	NA	False	AAAAAG	-10	NA	98142908	98150842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98142900_98150800
ES.6242.56	chr11	+	4137	2	Intergenic	novelGene_5063	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAGTTGGAAAACCA	NA	False	NA	NA	False	AAAAAG	-10	NA	98145581	98150842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98149634_98150757
ES.6242.57	chr11	+	5290	4	ISM	ENSMUSG00000003119.15	ENSMUST00000147441.8	2605	8	18874	-975	-2891	975	3prime_fragment	FALSE	canonical	3	10	junction_2	4.49691252107735	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTCTATTAATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	98151436	98170305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.58	chr11	+	3732	4	ISM	ENSMUSG00000003119.15	ENSMUST00000147441.8	2605	8	19499	-42	-2266	42	3prime_fragment	FALSE	canonical	3	10	junction_2	4.49691252107735	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGGTTTCTCTGTGTGG	NA	False	NA	NA	False	AAAAAG	-29	NA	98152061	98169372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.59	chr11	+	206	1	Intergenic	novelGene_5065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTCCTCTCTTTATAG	NA	False	NA	NA	False	NA	NA	NA	98159973	98160179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98160000_98160200
ES.6242.6	chr11	+	6212	18	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-295	13	combination_of_known_junctions	FALSE	canonical	3	9	junction_14	36.4238790072902	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATCCTTAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98093589	98169343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
ES.6242.60	chr11	+	152	1	ISM	ENSMUSG00000003119.15	ENSMUST00000147441.8	2605	8	36439	177	14674	-177	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	98169001	98169153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98169000_98169200
ES.6242.7	chr11	+	6565	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	-544	-1184	-289	1184	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTTCTAATGTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	98093595	98138714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ES.6242.8	chr11	+	6005	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	-289	196	-289	-196	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCTCCGTAACTCTT	NA	False	NA	69	True	AATAAA	-23	NA	98093595	98142194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ES.6242.9	chr11	+	7889	7	NNC	ENSMUSG00000003119.15	novel	4837	13	NA	NA	-284	4018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.0770779797305	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATTATGTTTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	98093600	98120366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98119168_98119377
ES.6243.1	chr11	-	209	1	Intergenic	novelGene_5059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAAAAGTAG	607	False	NA	NA	False	NA	NA	NA	98100906	98100697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98100700_98100900
ES.6244.1	chr11	-	254	1	Intergenic	novelGene_5061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGTAAGAAATAAAAATCT	NA	False	NA	NA	False	AATAAA	-17	NA	98134052	98133798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98133800_98134100
ES.6245.1	chr11	-	148	1	Intergenic	novelGene_5064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	98154938	98154790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98154800_98154900
ES.6246.1	chr11	+	3224	1	FSM	ENSMUSG00000093673.2	ENSMUST00000176721.2	2063	1	230	-1391	230	1391	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTATTAACTACTTCTT	NA	False	NA	NA	False	NA	NA	NA	98176437	98179661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98176400_98179700
ES.6247.1	chr11	+	178	1	Intergenic	novelGene_5066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTCAGAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	98231780	98231958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98231800_98232000
ES.6248.1	chr11	+	1668	7	FSM	ENSMUSG00000061718.13	ENSMUST00000078694.13	2001	7	333	0	333	0	multi-exon	FALSE	canonical	1	3	junction_1	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGACTCCTCTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	98239562	98248622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98240001_98241394_98241456_98241710_98241734_98242091_98242168_98246152_98246336_98247650_98247774_98247858
ES.6249.1	chr11	+	2085	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	-6	-9	-6	-4	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGTGTGATGGTGCAT	869	False	NA	7	True	AATAAA	-10	NA	98249187	98271934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.10	chr11	+	2977	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	0	-4	intron_retention	FALSE	canonical	3	18	junction_4	35.4748014576761	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGTGTGATGGTGCAT	938	False	NA	7	True	AATAAA	-10	NA	98249256	98271934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
ES.6249.11	chr11	+	3279	11	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	1	5	intron_retention	FALSE	canonical	3	134	junction_4	9.65867485734974	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTGCATTCCTTTAAT	939	False	NA	16	True	AATAAA	-19	NA	98249257	98271943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266555_98267315_98267434_98267577_98267947_98268275_98269045_98269160_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.12	chr11	+	4673	10	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	1	-16	intron_retention	FALSE	canonical	3	120	junction_7	12.212117034697	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	939	False	NA	-18	True	NA	NA	NA	98249257	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98267434_98267577_98267947_98268275_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
ES.6249.13	chr11	+	2199	16	NNC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.6538444292681	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGTGTGATGGTGCAT	939	False	NA	7	True	AATAAA	-10	NA	98249257	98271934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98249335_98260724_98260909_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.15	chr11	+	1903	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-3453	-16	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	34.1053016059547	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	9817	False	NA	-18	True	NA	NA	NA	98262892	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.16	chr11	+	3891	7	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	-422	-16	intron_retention	FALSE	canonical	3	128	junction_3	8.11206234909197	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	NA	False	NA	-18	True	NA	NA	NA	98265923	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98265984_98266301_98267434_98267577_98267677_98267890_98267947_98268275_98269045_98269160_98269825_98270798
ES.6249.2	chr11	+	2134	15	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	-4	-16	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	37.1593370033779	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	871	False	NA	-18	True	NA	NA	NA	98249189	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265829_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.4	chr11	+	3321	14	NNC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	12	-16	intron_retention	FALSE	canonical	0	0	junction_2	50.8358537222366	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	887	False	NA	-18	True	NA	NA	NA	98249205	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98249335_98260724_98260909_98262895_98263169_98265905_98265984_98266301_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
ES.6249.5	chr11	+	3006	14	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	22	-16	intron_retention	FALSE	canonical	3	120	junction_11	11.8071285257538	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	897	False	NA	-18	True	NA	NA	NA	98249215	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
ES.6249.6	chr11	+	5140	14	NNC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	-11	-16	intron_retention	FALSE	canonical	2	6	junction_1	49.1499336350657	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	926	False	NA	-18	True	NA	NA	NA	98249244	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98249335_98260724_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267323_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
ES.6249.7	chr11	+	2741	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	18	junction_4	35.4758022372814	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	936	False	NA	-18	True	NA	NA	NA	98249254	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.8	chr11	+	2593	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	-1	-16	intron_retention	FALSE	canonical	3	18	junction_4	35.0985088777826	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	936	False	NA	-18	True	NA	NA	NA	98249254	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.6249.9	chr11	+	2113	14	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	0	-16	intron_retention	FALSE	canonical	3	120	junction_10	11.9357253010254	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	937	False	NA	-18	True	NA	NA	NA	98249255	98271909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ES.625.1	chr1	+	2846	8	Antisense	novelGene_ENSMUSG00000025968.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAACAGTAATAGCAGT	1254	False	NA	NA	False	NA	NA	NA	63201871	63212461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_63203010_63203886_63204017_63204103_63204192_63205451_63205525_63208385_63208495_63209207_63209301_63210007_63210074_63211312
ES.625.2	chr1	+	2556	1	Antisense	novelGene_ENSMUSG00000025968.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAACAGTAATAGCAGT	9288	False	NA	NA	False	NA	NA	NA	63209905	63212461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_63209900_63212500
ES.6250.1	chr11	+	168	1	Intergenic	novelGene_5067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	98286414	98286582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98286400_98286600
ES.6251.1	chr11	-	2415	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	5	-1	5	1	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTGCTACTCTATG	NA	False	NA	NA	False	AATAAA	-22	NA	98291311	98279501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ES.6251.10	chr11	-	2389	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	257	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.1332297154607	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98290983	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98290736
ES.6251.11	chr11	-	2050	9	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.9864260723286	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGACTCTGCTACTC	NA	False	NA	NA	False	AATAAA	-18	NA	98291235	98279505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98279889_98280173_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ES.6251.2	chr11	-	4641	5	NIC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	-21	1	intron_retention	FALSE	canonical	3	49	junction_4	8.07774721070176	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTGCTACTCTATG	NA	False	NA	NA	False	AATAAA	-22	NA	98291284	98279501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721
ES.6251.3	chr11	-	3504	6	NIC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	255	-1	intron_retention	FALSE	canonical	3	48	junction_5	7.98498591107085	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98290985	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710
ES.6251.4	chr11	-	2222	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	237	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.1332297154607	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98291003	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98290923
ES.6251.5	chr11	-	2635	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	20.1200478759523	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98291265	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98279889_98280173_98280928_98281112_98281318_98281502_98281640_98281905_98282584_98288721_98288875_98289710_98289809_98291040
ES.6251.6	chr11	-	2361	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	19.4778786088742	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98291240	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289828_98291040
ES.6251.8	chr11	-	2292	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	20.2696113149005	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98291234	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288866_98289745_98289809_98291040
ES.6251.9	chr11	-	2348	8	NNC	ENSMUSG00000038208.14	novel	2419	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.921273625377	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACTCTGCTACTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	98291316	98279503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98280928_98281112_98281248_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ES.6252.1	chr11	-	198	1	Intergenic	novelGene_5068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTTCTTTCACAACA	NA	False	NA	NA	False	NA	NA	NA	98299417	98299219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98299200_98299400
ES.6253.1	chr11	+	4622	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-66	456	-66	183	multi-exon	TRUE	canonical	3	26	junction_8	10.5841234232719	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTCTGAGAGTGGTC	8971	False	NA	NA	False	NA	NA	NA	98303229	98328086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.10	chr11	+	7082	22	NIC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	2	178	intron_retention	FALSE	canonical	3	26	junction_7	9.29998902786274	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCCTATGTCTGAGAG	9039	False	NA	NA	False	NA	NA	NA	98303297	98328081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98315686_98315922_98316050_98317728_98317803_98317885_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98327008_98327138
ES.6253.11	chr11	+	4840	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	11	161	11	-161	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCCATGTGACTTGTT	9048	False	NA	NA	False	AATGAA	-39	NA	98303306	98328381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.12	chr11	+	4516	27	NNC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-11	182	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.030398105753	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTCTGAGAGTGGT	9049	False	NA	NA	False	NA	NA	NA	98303307	98328085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313392_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.13	chr11	+	4606	26	NNC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-11	53	intron_retention	FALSE	canonical	0	0	junction_24	14.356266924239	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTTTGTTTTTT	9049	False	NA	12	True	NA	NA	NA	98303307	98327956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326540_98326714_98327008_98327138
ES.6253.14	chr11	+	4537	26	NNC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-5	102	intron_retention	FALSE	canonical	0	0	junction_1	14.0760221653704	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGGGTGTTATATGAAA	9055	False	NA	61	True	NA	NA	NA	98303313	98328005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98303553_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.15	chr11	+	4926	25	NIC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-5	182	intron_retention	FALSE	canonical	3	30	junction_11	9.73788421007813	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGTCTGAGAGTGGT	9055	False	NA	NA	False	NA	NA	NA	98303313	98328085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326540_98326754_98327008_98327138
ES.6253.16	chr11	+	4854	26	NIC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	13.9628077405656	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGTAATTACTCTT	9060	False	NA	NA	False	CATAAA	-18	NA	98303318	98328540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.2	chr11	+	2221	15	ISM	ENSMUSG00000062312.6	ENSMUST00000136032.2	4431	26	-41	7984	-18	1521	5prime_fragment	FALSE	canonical	3	26	junction_8	12.9496670826327	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGTAATTTTTTTAAAAA	9019	False	NA	NA	False	NA	NA	NA	98303277	98319919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649
ES.6253.4	chr11	+	4466	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-18	564	-18	75	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGATGAAATAAGGATA	9019	False	NA	34	True	NA	NA	NA	98303277	98327978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.5	chr11	+	5028	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	-18	2	-18	-2	multi-exon	FALSE	canonical	3	26	junction_8	10.5841234232719	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGTAATTACTCTT	9019	False	NA	NA	False	CATAAA	-18	NA	98303277	98328540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.6	chr11	+	4409	26	NIC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-5	183	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	14.1225493449306	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGTCTGAGAGTGGTC	9032	False	NA	NA	False	NA	NA	NA	98303290	98328086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98303562_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.8	chr11	+	6070	26	NIC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	-1	93	intron_retention	FALSE	canonical	3	26	junction_7	10.740875197115	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGGGAGAGTGGGTGT	9036	False	NA	52	True	NA	NA	NA	98303294	98327996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6253.9	chr11	+	4678	28	NNC	ENSMUSG00000062312.6	novel	5012	27	NA	NA	1	187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.4744471047561	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGAGAGTGGTCCCGG	9038	False	NA	NA	False	NA	NA	NA	98303296	98328090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98303562_98310914_98311067_98311690_98311908_98312053_98312173_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ES.6254.1	chr11	+	2426	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	-24	-5	-24	5	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTGTCTGGCAAGAAC	NA	False	NA	23	True	AATAAA	-23	NA	98337635	98346204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ES.6254.2	chr11	+	2670	13	NIC	ENSMUSG00000019312.11	novel	2397	15	NA	NA	38	-3	intron_retention	FALSE	canonical	3	41	junction_1	7.34232403413403	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTGAGTCCTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	98337697	98346196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408
ES.6254.3	chr11	+	2342	14	NIC	ENSMUSG00000019312.11	novel	2397	15	NA	NA	-35	-3	intron_retention	FALSE	canonical	3	41	junction_1	7.27970348573599	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTGAGTCCTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	98337838	98346196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98338076_98341591_98341749_98341853_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ES.6254.4	chr11	+	2788	12	NIC	ENSMUSG00000019312.11	novel	2386	14	NA	NA	-8	-4	intron_retention	FALSE	canonical	3	41	junction_1	7.44011907840368	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCTGTGAGTCCTGTCT	NA	False	NA	14	True	AATAAA	-14	NA	98337865	98346195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98343095_98344006_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ES.6254.5	chr11	+	2319	14	NIC	ENSMUSG00000019312.11	novel	2397	15	NA	NA	-7	-3	intron_retention	FALSE	canonical	3	41	junction_1	7.45638204064777	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTGAGTCCTGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	98337866	98346196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98345108_98345223_98345312_98345408_98345503_98345684
ES.6254.6	chr11	+	4181	15	NNC	ENSMUSG00000019312.11	novel	667	4	NA	NA	1352	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9091810228034	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98339245	98346199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98341446_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ES.6255.1	chr11	-	1921	5	NNC	ENSMUSG00000002580.8	novel	747	4	NA	NA	-19012	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	353.954357933336	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCGTGTGTTTATGTC	9415	False	NA	-1	True	AATAAA	-24	NA	98348829	98328535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683_98330921_98348756
ES.6255.3	chr11	-	281	1	Intergenic	novelGene_5069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAAGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	98334788	98334507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98334500_98334800
ES.6256.1	chr11	-	5349	1	Genic_Genomic	ENSMUSG00000018168.9	novel	NA	NA	NA	NA	11169	4016	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTGTATGTCTGTCA	2410	False	NA	NA	False	AATAAA	-26	NA	98357060	98351711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_98351700_98357100
ES.6256.2	chr11	-	3302	4	ISM	ENSMUSG00000018168.9	ENSMUST00000103141.4	3658	8	56670	-4	-110	4	3prime_fragment	FALSE	canonical	0	0	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTAGCCTGCCTTGTAG	4848	False	NA	NA	False	ATTAAA	-24	NA	98379956	98355723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98358513_98367752_98367870_98376399_98376517_98379677
ES.6257.1	chr11	-	180	1	Intergenic	novelGene_5070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTCTCAGCTC	2572	False	NA	NA	False	NA	NA	NA	98382232	98382052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98382100_98382200
ES.6258.1	chr11	+	176	1	Intergenic	novelGene_5071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	98439505	98439681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98439500_98439700
ES.6259.1	chr11	-	2067	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	116	1	116	-1	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGGCCTCTGCTTCCT	1439	False	NA	0	True	AATAAA	-22	NA	98478078	98472082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ES.6259.2	chr11	-	2360	3	NIC	ENSMUSG00000038150.8	novel	2184	4	NA	NA	108	-4	intron_retention	FALSE	canonical	3	195	junction_1	9.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTCTGGCCTCTGCTT	1431	False	NA	-3	True	AATAAA	-19	NA	98478086	98472085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98474114_98474767_98474967_98477953
ES.626.1	chr1	+	1153	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	-31	817	-31	13	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCTGTGAAATGGTAT	NA	False	NA	43	True	AATAAA	-28	NA	63215952	63218828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ES.626.10	chr1	+	1538	1	FSM	ENSMUSG00000064602.3	ENSMUST00000082668.3	132	1	-893	-513	-893	513	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63217269	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63217300_63218800
ES.626.11	chr1	+	534	3	ISM	ENSMUSG00000025967.17	ENSMUST00000188524.2	681	5	1552	8	1459	-8	3prime_fragment	FALSE	canonical	3	3124	junction_2	48.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63217840	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_63218058_63218406_63218533_63218616
ES.626.2	chr1	+	707	5	FSM	ENSMUSG00000025967.17	ENSMUST00000188524.2	681	5	-34	8	-33	-8	multi-exon	FALSE	canonical	1	5	junction_1	1438.5358876302	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63216254	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63216451_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ES.626.6	chr1	+	789	6	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1304.21771188709	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTGGCTCTTCATTTT	NA	False	NA	28	True	AATAAA	-13	NA	63216290	63218813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63216451_63216912_63217036_63217608_63217725_63217990_63218058_63218406_63218533_63218616
ES.626.7	chr1	+	1387	5	NIC	ENSMUSG00000025967.17	novel	802	6	NA	NA	1	-8	intron_retention	FALSE	canonical	3	122	junction_1	1388.22357259197	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63216290	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63216451_63216881_63217725_63217990_63218058_63218406_63218533_63218616
ES.626.8	chr1	+	1493	5	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	-8	-8	intron_retention	FALSE	canonical	3	5	junction_1	1438.5358876302	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63216373	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63216671_63216912_63217725_63217990_63218058_63218406_63218533_63218616
ES.626.9	chr1	+	673	5	NIC	ENSMUSG00000025967.17	novel	642	5	NA	NA	880	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1440.68653339302	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAACCCTTGGCTCTT	NA	False	NA	22	True	AATAAA	-7	NA	63217261	63218807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63217424_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ES.6260.1	chr11	+	194	1	Intergenic	novelGene_5072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTAAACTAGT	NA	False	NA	NA	False	NA	NA	NA	98529155	98529349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98529200_98529300
ES.6261.1	chr11	-	171	1	Intergenic	novelGene_5073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTTTGTTTT	6253	False	NA	NA	False	NA	NA	NA	98544719	98544548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98544500_98544700
ES.6262.1	chr11	+	1676	12	FSM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	-4	1054	-4	-1054	multi-exon	FALSE	canonical	0	0	junction_2	1.46586504514519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACTTTGAGTCACTTCAT	3997	False	NA	NA	False	NA	NA	NA	98555172	98567480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98555265_98556881_98557101_98557276_98557458_98560444_98560611_98561582_98561680_98562143_98562192_98562556_98562584_98563120_98563142_98563801_98563957_98564431_98564547_98566698_98566773_98566999
ES.6262.2	chr11	+	2541	2	NIC	ENSMUSG00000017204.5	novel	2726	12	NA	NA	7855	-810	intron_retention	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTCTTACAAGAATGAAT	NA	False	NA	NA	False	NA	NA	NA	98563031	98567724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98564547_98566698
ES.6262.3	chr11	+	908	4	ISM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	8540	1056	8540	-1056	3prime_fragment	FALSE	canonical	2	2	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTACTTTGAGTCACTTC	NA	False	NA	NA	False	NA	NA	NA	98563716	98567478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98563957_98564431_98564547_98566698_98566773_98566999
ES.6262.4	chr11	+	1069	3	ISM	ENSMUSG00000017204.5	ENSMUST00000017348.3	2726	12	9074	836	9074	-836	3prime_fragment	FALSE	canonical	2	2	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98564250	98567698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98564547_98566698_98566773_98566999
ES.6263.1	chr11	+	1883	12	NNC	ENSMUSG00000017221.15	novel	666	6	NA	NA	-1529	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	344.405368499447	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98571850	98586805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98571970_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.10	chr11	+	4477	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	1019	junction_3	96.003124949139	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573411	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.12	chr11	+	5916	8	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	1019	junction_3	78.5051668649255	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573412	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98584324_98584404_98584525_98584630_98584735_98584963
ES.6263.14	chr11	+	2091	12	NNC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	344.958231990747	698	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	False	NA	12	True	AATAAA	-10	NA	98573413	98586801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98573764_98576326_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.15	chr11	+	2710	9	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	1019	junction_3	98.3208237099344	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573415	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98585120_98586188
ES.6263.16	chr11	+	3672	9	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-1	0	intron_retention	FALSE	canonical	3	1019	junction_3	97.2699208388698	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98573415	98586805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98586240_98586348
ES.6263.17	chr11	+	2335	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1019	junction_3	100.488058992101	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573419	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98585120_98586188_98586240_98586348
ES.6263.18	chr11	+	1809	13	NNC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	330.561349155577	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	False	NA	12	True	AATAAA	-10	NA	98573430	98586801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348_98586417_98586700
ES.6263.19	chr11	+	4757	9	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	84	-4	intron_retention	FALSE	canonical	3	1019	junction_3	94.4732104884766	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	False	NA	12	True	AATAAA	-10	NA	98573500	98586801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188
ES.6263.2	chr11	+	2404	13	NNC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-1527	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	330.030385806452	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCACGGTGTCAGT	NA	False	NA	17	True	AATAAA	-15	NA	98571852	98586806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98571970_98573241_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.20	chr11	+	1435	9	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	5122	2	-111	-2	3prime_fragment	FALSE	canonical	3	1054	junction_4	98.1101899651611	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	2578	False	NA	14	True	AATAAA	-12	NA	98578501	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.21	chr11	+	6013	2	NIC	ENSMUSG00000017221.15	novel	666	6	NA	NA	-602	-2	intron_retention	FALSE	canonical	3	1285	junction_1	0	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	4761	False	NA	14	True	AATAAA	-12	NA	98580684	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98584525_98584630
ES.6263.3	chr11	+	2317	13	NNC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-1512	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	330.561349155577	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	False	NA	12	True	AATAAA	-10	NA	98571867	98586801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98571966_98573304_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.4	chr11	+	4781	10	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	1019	junction_3	101.108302769302	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573369	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.5	chr11	+	2243	11	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	12	2	1	-2	intron_retention	FALSE	canonical	3	1019	junction_3	88.7324067069073	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573391	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188
ES.6263.6	chr11	+	3799	8	FSM	ENSMUSG00000017221.15	ENSMUST00000152102.2	2850	8	-23	-926	3	-4	multi-exon	FALSE	canonical	3	1019	junction_3	80.7161820257644	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	False	NA	12	True	AATAAA	-10	NA	98573393	98586801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630
ES.6263.8	chr11	+	2394	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	3	-2	intron_retention	FALSE	canonical	3	1019	junction_3	100.383066301045	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTTGTGCACGGTGTC	NA	False	NA	14	True	AATAAA	-12	NA	98573393	98586803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ES.6263.9	chr11	+	2141	12	NNC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	336.968130037778	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCACGGTGTCAGT	NA	False	NA	17	True	AATAAA	-15	NA	98573409	98586806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586326
ES.6264.1	chr11	-	1841	1	Intergenic	novelGene_5074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	98573191	98571350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98571400_98573200
ES.6265.1	chr11	-	3405	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	7	-2	7	2	multi-exon	FALSE	canonical	3	102	junction_19	25.7353919729232	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGGGGACAGTTTC	NA	False	NA	0	True	AATAAA	-25	NA	98620254	98595414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.10	chr11	-	4769	25	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-4	-4	intron_retention	FALSE	canonical	3	102	junction_19	25.7292257084343	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98620240	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.11	chr11	-	3417	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_25	38.4503003889436	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98620204	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620129
ES.6265.12	chr11	-	3726	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	7	-4	intron_retention	FALSE	non_canonical	0	0	junction_23	47.6253041985035	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98620254	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98617685_98617759_98619440_98619524_98619610_98619814_98620197
ES.6265.13	chr11	-	3798	25	NIC	ENSMUSG00000017210.15	novel	3133	27	NA	NA	-4	-4	intron_retention	FALSE	canonical	2	4	junction_18	46.1308525344542	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98620240	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608534_98608592_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.14	chr11	-	3434	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-6821	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	38.9111809124318	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98627082	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98626990
ES.6265.15	chr11	-	3619	19	NIC	ENSMUSG00000017210.15	novel	4577	24	NA	NA	1782	-5	intron_retention	FALSE	canonical	3	102	junction_18	27.3227734795954	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGCTTGTGTGGGGA	NA	False	NA	-7	True	AATAAA	-18	NA	98607854	98595421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239
ES.6265.17	chr11	-	3443	27	FSM	ENSMUSG00000017210.15	ENSMUST00000100500.9	3133	27	-7	-303	1	-6	multi-exon	FALSE	canonical	2	4	junction_20	46.7567196069438	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620243	98595422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608534_98608592_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.19	chr11	-	3403	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	8	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_24	39.4319667275169	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620253	98595422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619603_98619814_98620197
ES.6265.2	chr11	-	3570	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	0	2	intron_retention	TRUE	non_canonical	0	0	junction_23	47.3934341444044	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGGGGACAGTTTC	NA	False	NA	0	True	AATAAA	-25	NA	98620244	98595414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98617685_98617759_98619440_98619524_98619610_98619814_98620197
ES.6265.22	chr11	-	3543	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-4	-6	intron_retention	FALSE	non_canonical	0	0	junction_24	48.6941474922808	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620240	98595422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98617685_98617759_98619440_98619814_98620197
ES.6265.23	chr11	-	4893	24	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	7	-6	intron_retention	FALSE	canonical	3	102	junction_18	26.1665452579671	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620254	98595422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.24	chr11	-	3434	27	NIC	ENSMUSG00000017210.15	novel	3133	27	NA	NA	1	-6	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	51.3617089662036	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTGCTTGTGTGGGG	NA	False	NA	-8	True	AATAAA	-17	NA	98620243	98595422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608534_98608592_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
ES.6265.25	chr11	-	4825	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	3	-7	intron_retention	FALSE	non_canonical	0	0	junction_23	48.6464140507808	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTTGCTTGTGTGGG	NA	False	NA	-9	True	AATAAA	-16	NA	98620226	98595423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98617685_98617759_98619440_98619524_98619610_98619814_98620197
ES.6265.28	chr11	-	5173	22	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	1	-8	intron_retention	FALSE	canonical	0	0	junction_15	42.6297672073657	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTTGCTTGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	98620243	98595424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98601280_98601598_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.29	chr11	-	3277	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	38.4103319433717	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTTGCTTGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	98620235	98595424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598461_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.30	chr11	-	3474	25	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-4	-8	intron_retention	FALSE	canonical	3	29	junction_24	33.9570551906702	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTTGCTTGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	98620240	98595424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
ES.6265.31	chr11	-	2922	23	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-86	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4747093205274	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTTGCTTGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	98609722	98595424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595836_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608806_98609322_98609397_98609643
ES.6265.32	chr11	-	5969	20	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	1	-8	intron_retention	FALSE	canonical	2	2	junction_18	40.0697452891159	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTGTTGCTTGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	98620243	98595424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619603_98619814_98620197
ES.6265.33	chr11	-	4845	24	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	1	-9	intron_retention	FALSE	canonical	3	29	junction_23	35.781103037687	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTTGCTTGTGTG	NA	False	NA	-11	True	AATAAA	-14	NA	98620243	98595425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619814_98620206
ES.6265.34	chr11	-	4776	25	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-1	-9	intron_retention	FALSE	canonical	2	2	junction_23	40.0416233090296	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTTGCTTGTGTG	NA	False	NA	-11	True	AATAAA	-14	NA	98620245	98595425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619603_98619814_98620197
ES.6265.35	chr11	-	3371	26	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.1998174270401	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTGTTGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	98620254	98595426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600409_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619806_98620209
ES.6265.36	chr11	-	6667	18	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	0	-10	intron_retention	FALSE	canonical	0	0	junction_6	41.0588235294118	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTGTTGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	98620229	98595426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98596429_98597204_98597305_98597651_98598628_98600407_98601280_98601598_98602127_98603358_98603799_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.37	chr11	-	3464	27	NNC	ENSMUSG00000017210.15	novel	3133	27	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	47.7785200926998	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTGTTGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	98620254	98595426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98617685_98617757_98619440_98619524_98619610_98619814_98620197
ES.6265.38	chr11	-	5384	22	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	102	junction_16	25.62533114658	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCTGTGTTGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	98620240	98595426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98601280_98601598_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ES.6265.4	chr11	-	3055	23	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	41.4489629414973	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98609524	98595416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609490
ES.6265.5	chr11	-	3395	26	NIC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	4	-2	combination_of_known_junctions	FALSE	canonical	3	29	junction_25	34.6175446847404	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTGTGTGGGGACAG	NA	False	NA	-4	True	AATAAA	-21	NA	98620257	98595418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620206
ES.6265.6	chr11	-	3216	24	NNC	ENSMUSG00000017210.15	novel	3410	26	NA	NA	-3280	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	40.5394158123244	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTGTGTGGGGACAG	NA	False	NA	-4	True	AATAAA	-21	NA	98612916	98595418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98612758
ES.6265.8	chr11	-	1965	11	NNC	ENSMUSG00000017210.15	novel	4577	24	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	55.8333233830837	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTGTGTGGGGAC	NA	False	NA	-6	True	AATAAA	-19	NA	98601904	98595420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598542_98600407_98600584_98600888_98600989_98601100_98601280_98601598
ES.6266.1	chr11	+	2461	11	NNC	ENSMUSG00000058756.14	novel	1240	9	NA	NA	-69	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.8016890928029	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	5048	False	NA	27	True	NA	NA	NA	98631394	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98631514_98632183_98632274_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658984
ES.6266.10	chr11	+	2426	1	Intergenic	novelGene_5076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATAACCCCCTTGGGC	9374	False	NA	-1	True	AATAAA	-8	NA	98656137	98658563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98656100_98658600
ES.6266.11	chr11	+	3572	1	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	11847	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	9495	False	NA	27	True	NA	NA	NA	98656258	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98656300_98659800
ES.6266.2	chr11	+	2133	9	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	-32	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	15.8271917913444	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	6258	False	NA	27	True	NA	NA	NA	98632604	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98632833_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
ES.6266.3	chr11	+	2333	10	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	11.7104996677826	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	6290	False	NA	27	True	NA	NA	NA	98632636	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98659099
ES.6266.4	chr11	+	2377	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	73	2	11	-2	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	6363	False	NA	27	True	NA	NA	NA	98632709	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
ES.6266.5	chr11	+	5064	8	NNC	ENSMUSG00000058756.14	novel	2246	9	NA	NA	1803	-664	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.7537611946159	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAACCCCCTTGGGCAC	NA	False	NA	1	True	AATAAA	-10	NA	98646214	98658565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98657190_98657235
ES.6266.6	chr11	+	160	1	Intergenic	novelGene_5075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	2126	False	NA	NA	False	NA	NA	NA	98648889	98649049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98648900_98649000
ES.6266.7	chr11	+	1368	4	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21030	96	9255	-96	3prime_fragment	FALSE	canonical	3	34	junction_1	6.79869268479038	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTAGACTGTGTCTGA	6903	False	NA	-67	True	NA	NA	NA	98653666	98659736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98653894_98654354_98654614_98655103_98655232_98658982
ES.6266.8	chr11	+	1306	3	ISM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	21647	2	9872	-2	3prime_fragment	FALSE	canonical	3	46	junction_2	2	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCGTGTGCCTCCTCCA	7520	False	NA	27	True	NA	NA	NA	98654283	98659830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98654614_98655103_98655232_98658982
ES.6266.9	chr11	+	3722	3	NNC	ENSMUSG00000058756.14	novel	2246	9	NA	NA	9901	-660	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCCCCTTGGGCACCCCC	7549	False	NA	5	True	AATAAA	-14	NA	98654312	98658569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98654614_98655103_98657192_98657236
ES.6267.1	chr11	-	2807	3	Antisense	novelGene_ENSMUSG00000058756.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACACAGGACTTCTATT	NA	False	NA	NA	False	NA	NA	NA	98656245	98651984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_98652750_98653742_98653892_98654352
ES.6267.2	chr11	-	2317	4	Antisense	novelGene_ENSMUSG00000058756.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACACAGGACTTCTATT	NA	False	NA	NA	False	NA	NA	NA	98656245	98651984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_98652750_98653742_98653892_98654352_98654611_98655100
ES.6268.1	chr11	-	2804	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	-77	-6	-77	6	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTGTGCTCGTT	NA	False	NA	6	True	NA	NA	NA	98666236	98658751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ES.6268.3	chr11	-	3741	6	NIC	ENSMUSG00000020889.12	novel	2721	8	NA	NA	49	-3	intron_retention	FALSE	canonical	3	30	junction_5	4.79165942028438	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGCTTCTGTGATGT	NA	False	NA	-3	True	NA	NA	NA	98666110	98658760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ES.6268.4	chr11	-	3585	6	NIC	ENSMUSG00000020889.12	novel	2721	8	NA	NA	51	-157	intron_retention	FALSE	canonical	3	30	junction_5	4.79165942028438	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCCCCTGAGCCT	NA	False	NA	1	True	TATAAA	-15	NA	98666108	98658914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ES.6268.5	chr11	-	2601	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	-40	160	-40	-160	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGGCCCCCTGAG	NA	False	NA	-2	True	TATAAA	-12	NA	98666199	98658917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ES.6269.1	chr11	+	1109	1	Intergenic	novelGene_5077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAAAAACAA	6227	False	NA	NA	False	NA	NA	NA	98670622	98671731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98670600_98671700
ES.627.1	chr1	-	3242	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	-487	-165	-386	26	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATAGATCATTCAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	63216378	63182728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ES.627.11	chr1	-	2597	19	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	279.609449848256	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTAAAGTGTGAAGTT	NA	False	NA	NA	False	AATAAA	-32	NA	63215840	63182753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ES.627.12	chr1	-	2359	18	NNC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	234.201891434628	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTAAAGTGTGAAGTT	NA	False	NA	NA	False	AATAAA	-32	NA	63215861	63182753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186577_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.13	chr1	-	2854	21	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_20	279.352443160965	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215860	63182754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63214848_63215586
ES.627.14	chr1	-	2725	20	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	269.621248659173	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215839	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186542_63187566_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ES.627.15	chr1	-	5788	17	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	10	-2	intron_retention	FALSE	canonical	3	367	junction_16	137.107394038396	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215839	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.16	chr1	-	2633	18	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	367	junction_17	131.421664801656	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215858	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.17	chr1	-	3563	19	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	163	junction_18	202.926437136438	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215982	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
ES.627.19	chr1	-	2727	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_19	272.493472437003	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215839	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63214795_63214848_63215586
ES.627.2	chr1	-	3264	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	-597	-6	-586	6	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGAAGTTTTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	63216578	63182748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.20	chr1	-	2702	21	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	266.621191955928	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215858	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586_63215684_63215779
ES.627.21	chr1	-	2558	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_19	272.193826572861	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63215828	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63214795_63214848_63215744
ES.627.22	chr1	-	3622	22	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-235	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	313.593292075049	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGATATTAAAGTGTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	63216227	63182756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63215491_63215586_63215684_63215923
ES.627.24	chr1	-	2754	18	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	0	1	intron_retention	FALSE	canonical	3	212	junction_17	164.752493404637	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215826	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ES.627.26	chr1	-	2470	17	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	10	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	259.69927771126	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215839	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63210007_63210074_63215586
ES.627.28	chr1	-	3294	18	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	1	intron_retention	FALSE	canonical	3	367	junction_17	133.350437195931	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215822	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.29	chr1	-	2468	18	NNC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	237.811038359026	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215842	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204055_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.30	chr1	-	2706	19	NNC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	291.15502743384	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63216002	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186382_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204021_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.31	chr1	-	2560	20	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	12	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	239.419114661662	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215969	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586_63215684_63215923
ES.627.34	chr1	-	2546	18	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	2	21	junction_15	253.509279943163	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215823	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63209208_63209301_63210007_63210074_63215586
ES.627.35	chr1	-	2994	21	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-173	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_20	279.082116051889	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63216165	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63214848_63215744
ES.627.37	chr1	-	2361	18	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	238.286094801561	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACTGATATTAAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	63215834	63182761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ES.627.38	chr1	-	2891	23	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	341.496524188838	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACACTGATATTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	63215999	63182762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63214848_63215344_63215491_63215586_63215684_63215923
ES.627.4	chr1	-	2984	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-203	5	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTGTGAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	63216195	63182749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
ES.627.40	chr1	-	2623	20	NNC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	379.23635179966	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACACTGATATTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	63215854	63182762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186577_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195487_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204055_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63214848_63215744
ES.627.41	chr1	-	2475	18	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	329.695927855184	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAACACTGATATTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	63215823	63182762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186577_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ES.627.42	chr1	-	2702	21	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_20	264.909682722244	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACACTGATATTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	63215944	63182763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586_63215684_63215858
ES.627.43	chr1	-	3444	21	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	321.490633611619	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACACTGATATTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	63215806	63182763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196280_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63214795_63215491_63215586
ES.627.44	chr1	-	2967	20	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	391.192487564459	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACACTGATATTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	63215818	63182763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186577_63187554_63187731_63189115_63189271_63189417_63189693_63190709_63190871_63191933_63192064_63195362_63195487_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204055_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ES.627.47	chr1	-	175	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	518	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAACCAAAACTGGAC	NA	False	NA	NA	False	NA	NA	NA	63188467	63188292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63188300_63188500
ES.627.48	chr1	-	3447	1	FSM	ENSMUSG00000025968.17	ENSMUST00000186569.2	2610	1	-818	-19	-818	19	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTTGAATATAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	63192819	63189372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_63189400_63192800
ES.627.49	chr1	-	1474	11	ISM	ENSMUSG00000025968.17	ENSMUST00000185827.7	1775	12	-12	2785	9	-566	5prime_fragment	FALSE	canonical	3	163	junction_10	251.098387091594	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCATTCTTTTCTCCTG	NA	False	NA	NA	False	NA	NA	NA	63215840	63198626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
ES.627.5	chr1	-	2705	21	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	-7	4	combination_of_known_junctions	FALSE	canonical	3	31	junction_20	262.230294779226	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTGTGAAGTTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	63215999	63182750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586_63215684_63215923
ES.627.50	chr1	-	6140	5	NNC	ENSMUSG00000025968.17	novel	1775	12	NA	NA	224	2060	intron_retention	FALSE	non_canonical	0	0	junction_4	399.369737837007	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAATTTCAGAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	63215598	63206351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63208496_63209208_63209301_63210007_63210074_63211312_63212810_63213257
ES.627.7	chr1	-	2891	19	NIC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	0	3	intron_retention	FALSE	canonical	3	123	junction_18	208.383142193934	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGTGTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	63215849	63182751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_63183082_63186278_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
ES.627.8	chr1	-	3487	20	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	1	3	intron_retention	FALSE	canonical	1	3	junction_19	272.493472437003	535	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGTGTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	63215951	63182751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63214795_63215491_63215586
ES.627.9	chr1	-	2657	20	NNC	ENSMUSG00000025968.17	novel	2590	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_19	242.611964043311	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAAGTGTGAAGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	63215991	63182751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586_63215684_63215858
ES.6270.1	chr11	+	1228	1	Intergenic	novelGene_5078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCCAAAAGTCAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	98679950	98681178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98680000_98681200
ES.6271.1	chr11	+	5198	10	NNC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	-600	17784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	16.8903508139199	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGATGACTTCACTACCT	225	False	NA	NA	False	NA	NA	NA	98685741	98716469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167_98698676_98716454
ES.6271.10	chr11	+	4773	7	NIC	ENSMUSG00000052915.15	novel	2836	8	NA	NA	487	25	intron_retention	FALSE	canonical	3	41	junction_4	7.6303487615064	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATCAGGACAGC	1101	False	NA	NA	False	NA	NA	NA	98687112	98697285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98687431_98689965_98690190_98690825_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.11	chr11	+	3651	8	FSM	ENSMUSG00000052915.15	ENSMUST00000107487.10	2836	8	603	-1418	603	-7	multi-exon	FALSE	canonical	2	4	junction_3	17.7924542593603	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	1217	False	NA	24	True	AATAAA	-15	NA	98687228	98698678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.12	chr11	+	5555	8	NIC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	633	-6	intron_retention	FALSE	canonical	3	41	junction_5	7.68778516975641	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGAACTTTTGCCTCA	1247	False	NA	25	True	AATAAA	-16	NA	98687258	98698679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98687431_98689965_98690190_98690825_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.13	chr11	+	1188	8	ISM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	3677	2263	539	-11	3prime_fragment	FALSE	canonical	3	39	junction_2	8.48287590817344	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAGAAGAAAGCT	4007	False	NA	NA	False	NA	NA	NA	98690018	98696422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.14	chr11	+	5158	6	NIC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	-167	-9	intron_retention	FALSE	canonical	3	41	junction_3	7.1386273190299	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTTGAACTTTTGCC	292	False	NA	22	True	AATAAA	-13	NA	98690823	98698676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.15	chr11	+	2887	7	ISM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	4728	149	79	-149	3prime_fragment	FALSE	canonical	3	39	junction_1	7.2953562094131	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGCTTTATTTTATGC	538	False	NA	NA	False	AATAAA	-27	NA	98691069	98698536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.16	chr11	+	3131	7	NNC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	208	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.6189867250253	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	667	False	NA	24	True	AATAAA	-15	NA	98691198	98698678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98691440_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.17	chr11	+	2639	6	ISM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	5571	1439	922	-14	3prime_fragment	FALSE	canonical	3	41	junction_3	7.1386273190299	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGATAAAAAAGAAAAAA	1381	False	NA	NA	False	NA	NA	NA	98691912	98697246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.18	chr11	+	5208	1	NIC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	1048	-14	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGATAAAAAAGAAAAAA	1507	False	NA	NA	False	NA	NA	NA	98692038	98697246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98692000_98697200
ES.6271.19	chr11	+	2110	7	NNC	ENSMUSG00000052915.15	novel	667	3	NA	NA	1265	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.9685412078935	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAGAAAAAAAAAAA	1724	False	NA	NA	False	NA	NA	NA	98692255	98697251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98692903_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.2	chr11	+	3512	9	NNC	ENSMUSG00000052915.15	novel	4593	9	NA	NA	-328	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.9125479762093	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGGACAGCACTC	2	True	NA	NA	False	NA	NA	NA	98686013	98697289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693620_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.20	chr11	+	3871	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	-129	-1	-129	1	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	153	False	NA	15	True	AATAAA	-20	NA	98700504	98724633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.22	chr11	+	4081	12	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-14	-3	intron_retention	FALSE	canonical	0	0	junction_1	84.8434630548547	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCTGTGGCCAGTTAT	268	False	NA	11	True	AATAAA	-16	NA	98700619	98724629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98701313_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.23	chr11	+	3697	14	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.3985010693155	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	268	False	NA	15	True	AATAAA	-20	NA	98700619	98724633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719744_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.24	chr11	+	2544	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	-5	1202	-5	-1202	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATGTTTTTAGTTTT	277	False	NA	NA	False	TTTAAA	-19	NA	98700628	98723430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.26	chr11	+	5212	12	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-3	1	intron_retention	FALSE	canonical	3	273	junction_10	19.0636168552378	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	279	False	NA	15	True	AATAAA	-20	NA	98700630	98724633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98713364_98713545_98714226_98718397_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.27	chr11	+	5154	11	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-3	69	intron_retention	FALSE	canonical	3	278	junction_6	17.7313282074412	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCGACTGGTAAAATGG	279	False	NA	91	True	NA	NA	NA	98700630	98724709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113
ES.6271.28	chr11	+	4284	13	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	273	junction_11	18.8596792125423	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGACTCTGTGGCCAG	281	False	NA	7	True	AATAAA	-12	NA	98700632	98724625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.29	chr11	+	3850	13	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	-1	1	intron_retention	FALSE	canonical	0	0	junction_3	83.3636611480086	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	281	False	NA	15	True	AATAAA	-20	NA	98700632	98724633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701793_98712256_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.3	chr11	+	4921	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	-327	-1	-327	1	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGCCTCATTTTATT	3	True	NA	32	True	AATAAA	-23	NA	98686014	98698686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.30	chr11	+	3770	14	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	81.375526611881	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	282	False	NA	12	True	AATAAA	-17	NA	98700633	98724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701793_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.31	chr11	+	6507	12	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_1	86.7505209930291	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	291	False	NA	14	True	AATAAA	-19	NA	98700642	98724632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700916_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98719496_98719685_98719785_98720039_98722237_98722368_98722435_98723086
ES.6271.32	chr11	+	2951	12	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	88.435343146026	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACTTGACTCTGTGGCC	291	False	NA	5	True	AATAAA	-10	NA	98700642	98724623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98713671_98719722_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.33	chr11	+	3718	13	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.7935663729122	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	295	False	NA	14	True	AATAAA	-19	NA	98700646	98724632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700936_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.34	chr11	+	4646	13	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	14	1	intron_retention	FALSE	canonical	3	273	junction_11	19.2541481822028	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCAGTTATTGTG	296	False	NA	15	True	AATAAA	-20	NA	98700647	98724633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.35	chr11	+	3803	13	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	14	0	intron_retention	FALSE	canonical	3	273	junction_11	17.9928612387123	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	296	False	NA	14	True	AATAAA	-19	NA	98700647	98724632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.38	chr11	+	6761	10	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	19	-2	intron_retention	FALSE	canonical	0	0	junction_2	95.3321678250433	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	301	False	NA	12	True	AATAAA	-17	NA	98700652	98724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98701313_98701723_98701793_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039
ES.6271.39	chr11	+	7357	9	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	19	-2	intron_retention	FALSE	canonical	3	278	junction_4	18.0138835346518	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	301	False	NA	12	True	AATAAA	-17	NA	98700652	98724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712638_98713186_98713364_98713545_98714226_98718397_98719496_98719685_98719785_98720039
ES.6271.4	chr11	+	2687	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	-602	6	-327	-6	multi-exon	FALSE	canonical	3	46	junction_1	7.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATAAGGACTATCTTG	3	True	NA	NA	False	AATAAA	-22	NA	98686014	98691872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825
ES.6271.41	chr11	+	4330	12	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	28	-8	intron_retention	FALSE	canonical	3	273	junction_10	18.0220250923627	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGACTCTGTGGCCA	310	False	NA	6	True	AATAAA	-11	NA	98700661	98724624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.42	chr11	+	1915	4	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	31	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	140.949951716518	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACTTGACTCTGTGGCC	313	False	NA	5	True	AATAAA	-10	NA	98700664	98724623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700936_98701723_98701762_98712256_98712348_98723108
ES.6271.44	chr11	+	3682	14	NNC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	81.62731008357	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGACTCTGTGGCCA	313	False	NA	6	True	AATAAA	-11	NA	98700664	98724624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722415_98723086
ES.6271.46	chr11	+	2604	8	ISM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	41	5102	41	-5102	intron_retention	FALSE	canonical	3	278	junction_5	20.6288880070682	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTCCGGCTACGCA	323	False	NA	NA	False	NA	NA	NA	98700674	98719530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397
ES.6271.47	chr11	+	2666	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	41	1034	41	-1034	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGTCTTTATTAGTCT	323	False	NA	NA	False	NA	NA	NA	98700674	98723598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.48	chr11	+	4478	12	ISM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	41	6	41	-6	intron_retention	FALSE	canonical	3	278	junction_5	18.3703857983485	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGACTCTGTGGCCAGT	323	False	NA	8	True	AATAAA	-13	NA	98700674	98724626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113
ES.6271.49	chr11	+	5224	11	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	52	-8	intron_retention	FALSE	canonical	3	273	junction_9	18.3673623582702	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGACTCTGTGGCCA	334	False	NA	6	True	AATAAA	-11	NA	98700685	98724624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98713364_98713545_98714226_98718397_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.5	chr11	+	3504	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	-307	1396	-307	29	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCAGGACAGCACTC	23	False	NA	NA	False	NA	NA	NA	98686034	98697289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.51	chr11	+	3729	13	ISM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	371	8	18	-8	3prime_fragment	FALSE	canonical	3	273	junction_11	16.5168264371687	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGACTCTGTGGCCA	653	False	NA	6	True	AATAAA	-11	NA	98701004	98724624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.52	chr11	+	3333	10	NNC	ENSMUSG00000078676.10	novel	3963	15	NA	NA	11702	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91.1918341590076	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	NA	False	NA	12	True	AATAAA	-17	NA	98712688	98724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98712938_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.53	chr11	+	2976	5	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	17770	-2	intron_retention	FALSE	canonical	3	273	junction_3	12.0933866224478	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTGTGGCCAGTTATT	NA	False	NA	12	True	AATAAA	-17	NA	98718756	98724630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ES.6271.6	chr11	+	2431	8	FSM	ENSMUSG00000052915.15	ENSMUST00000107487.10	2836	8	-411	816	-127	11	multi-exon	FALSE	canonical	2	4	junction_3	17.7924542593603	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTGGCTGATTGTGAAT	203	False	NA	NA	False	AAGAAA	-6	NA	98686214	98696444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.7	chr11	+	3130	8	FSM	ENSMUSG00000052915.15	ENSMUST00000107487.10	2836	8	-263	-31	21	31	multi-exon	FALSE	canonical	2	4	junction_3	17.7924542593603	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGGACAGCACTCCC	351	False	NA	NA	False	NA	NA	NA	98686362	98697291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ES.6271.9	chr11	+	1115	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	417	559	408	-559	multi-exon	FALSE	canonical	3	46	junction_1	7.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATGAGTAAGTTAACAG	1022	False	NA	NA	False	AATAAA	-14	NA	98687033	98691319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98687431_98689965_98690190_98690825
ES.6272.1	chr11	-	1135	4	FSM	ENSMUSG00000075576.13	ENSMUST00000153181.8	680	4	12	-467	12	467	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATCTGCCAGCTTAGT	6866	False	NA	NA	False	AATACA	-18	NA	98700901	98688065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98688627_98689947_98690060_98692791_98692854_98700501
ES.6273.1	chr11	-	2180	1	Antisense	novelGene_ENSMUSG00000078676.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGATCACTGGTAAGCC	5339	False	NA	NA	False	NA	NA	NA	98724077	98721897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_98721900_98724100
ES.6274.1	chr11	+	4144	15	FSM	ENSMUSG00000038020.6	ENSMUST00000107479.3	4855	15	19	692	19	6	multi-exon	TRUE	non_canonical	0	0	junction_2	1.24539969815448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTATGTTCTCCGTTC	NA	False	NA	NA	False	AATACA	-19	NA	98727629	98743831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98728500_98731085_98731165_98733020_98733157_98733383_98733482_98736700_98736814_98736947_98737116_98737901_98738000_98738112_98738236_98739943_98740123_98740200_98740292_98740754_98740806_98740919_98741008_98741190_98741256_98741610_98741666_98741901
ES.6274.2	chr11	+	2820	4	NIC	ENSMUSG00000038020.6	novel	4855	15	NA	NA	-966	-1	intron_retention	FALSE	canonical	0	0	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAACTTCCTTATGTTC	NA	False	NA	NA	False	AATACA	-12	NA	98740191	98743824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98740292_98740754_98740806_98740919_98741666_98741901
ES.6274.3	chr11	+	2104	3	FSM	ENSMUSG00000038020.6	ENSMUST00000139889.2	2077	3	-23	-4	-23	4	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCTTATGTTCTCCGT	214	False	NA	NA	False	AATACA	-17	NA	98741134	98743829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98741256_98741610_98741666_98741901
ES.6275.1	chr11	-	174	1	Intergenic	novelGene_5079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	98732797	98732623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98732600_98732800
ES.6276.1	chr11	-	173	1	Intergenic	novelGene_5080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATATAAACAGTCG	NA	False	NA	NA	False	NA	NA	NA	98751106	98750933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98750900_98751100
ES.6277.1	chr11	-	173	1	Intergenic	novelGene_5081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	98753108	98752935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98752900_98753100
ES.6278.1	chr11	-	218	1	Intergenic	novelGene_5082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGATGTATCTCAAGTAT	NA	False	NA	NA	False	NA	NA	NA	98754382	98754164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98754200_98754400
ES.6279.1	chr11	+	4248	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	-38	2801	-38	-2801	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGTCTGTTTTATATA	904	False	NA	39	True	NA	NA	NA	98754425	98793065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.10	chr11	+	5317	8	NIC	ENSMUSG00000038013.15	novel	1846	4	NA	NA	-69	-1522	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	4.94046184736874	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGCTGTTTCCTTTCTGC	1352	False	NA	13	True	ATTAAA	-13	NA	98754873	98794344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98754967_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.11	chr11	+	5715	8	NIC	ENSMUSG00000038013.15	novel	1846	4	NA	NA	-57	-1112	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	4.94046184736874	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAG	1364	False	NA	NA	False	ATTAAA	-5	NA	98754885	98794754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98754967_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.12	chr11	+	3967	8	NIC	ENSMUSG00000038013.15	novel	1846	4	NA	NA	2	-2801	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	4.94046184736874	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGTCTGTTTTATATA	1423	False	NA	39	True	NA	NA	NA	98754944	98793065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98754967_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.13	chr11	+	5793	9	NNC	ENSMUSG00000038013.15	novel	1846	4	NA	NA	21	-1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.51920240520265	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAACAAAAAG	1442	False	NA	NA	False	ATTAAA	-5	NA	98754963	98794754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98754995_98758435_98758564_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.14	chr11	+	5364	2	NNC	ENSMUSG00000038013.15	novel	391	3	NA	NA	184	-5629	intron_retention	TRUE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAACCATAGATCTTTA	6163	False	NA	NA	False	NA	NA	NA	98782182	98790237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98784032_98786722
ES.6279.15	chr11	+	5549	3	ISM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	32650	-12	5115	12	3prime_fragment	FALSE	canonical	3	11	junction_1	0.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATAGCCTGCATTATG	NA	False	NA	52	True	NA	NA	NA	98787113	98795878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98787153_98789556_98789659_98790470
ES.6279.16	chr11	+	5696	2	ISM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	33802	1093	6267	-1093	3prime_fragment	FALSE	canonical	3	12	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACCTCTGTGTATTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	98788265	98794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98789659_98790470
ES.6279.2	chr11	+	5265	8	NIC	ENSMUSG00000038013.15	novel	7011	8	NA	NA	1	-1522	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.67845911838623	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGCTGTTTCCTTTCTGC	943	False	NA	13	True	ATTAAA	-13	NA	98754464	98794344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98754506_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.3	chr11	+	6051	9	NNC	ENSMUSG00000038013.15	novel	7011	8	NA	NA	1	-1087	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.51920240520265	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTATTCTTGTCGT	943	False	NA	NA	False	ATTAAA	-30	NA	98754464	98794779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98754729_98758435_98758564_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.4	chr11	+	5514	8	NNC	ENSMUSG00000038013.15	novel	7011	8	NA	NA	1	-1093	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	6.04067843196171	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACCTCTGTGTATTCT	943	False	NA	NA	False	ATTAAA	-24	NA	98754464	98794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790873
ES.6279.5	chr11	+	5917	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	1	1093	1	-1093	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAACCTCTGTGTATTCT	943	False	NA	NA	False	ATTAAA	-24	NA	98754464	98794773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.6	chr11	+	7541	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	8	-538	8	538	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGAGCCTGACAGAGTG	950	False	NA	NA	False	CATAAA	-21	NA	98754471	98796404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.7	chr11	+	2146	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	8	4857	8	-4857	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGGACATGGGTCTTC	950	False	NA	NA	False	TTTAAA	-17	NA	98754471	98791009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.8	chr11	+	5461	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	27	1523	27	-1523	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGCTGTTTCCTTTCTG	969	False	NA	12	True	ATTAAA	-12	NA	98754490	98794343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.6279.9	chr11	+	5307	8	FSM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	46	1658	46	-1658	multi-exon	FALSE	canonical	2	8	junction_1	4.16986271980755	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAACAGCAACCATGTAA	988	False	NA	NA	False	AAAAAG	-16	NA	98754509	98794208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98754729_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ES.628.1	chr1	-	175	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGCCCAAACAG	NA	False	NA	NA	False	NA	NA	NA	63219902	63219727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63219700_63219900
ES.6280.1	chr11	-	171	1	Intergenic	novelGene_5083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8184	False	NA	NA	False	NA	NA	NA	98767192	98767021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98767000_98767200
ES.6281.1	chr11	-	159	1	Intergenic	novelGene_5084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4514	False	NA	NA	False	NA	NA	NA	98770862	98770703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98770700_98770900
ES.6282.1	chr11	-	189	1	Intergenic	novelGene_5085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACCAAACTAACCTA	3540	False	NA	NA	False	NA	NA	NA	98771836	98771647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98771600_98771800
ES.6283.11	chr11	+	1905	12	NNC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	12	-120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	191.25107896849	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGAGTGTTAGCGCTGG	29	False	NA	10	True	AGTAAA	-15	NA	98798638	98812167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811538_98811941
ES.6283.12	chr11	+	2856	11	ISM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	16	2044	16	-1	intron_retention	FALSE	canonical	3	550	junction_4	58.4468989767635	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	33	False	NA	7	True	AATATA	-16	NA	98798642	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498
ES.6283.13	chr11	+	3164	11	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	16	-1	intron_retention	FALSE	canonical	3	564	junction_8	56.2369984974305	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	33	False	NA	7	True	AATATA	-16	NA	98798642	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.15	chr11	+	2884	11	NNC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_8	198.758245111995	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTGGGCTGCAT	33	False	NA	5	True	AATATA	-14	NA	98798642	98812716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807749_98807845_98810028_98810232_98811498
ES.6283.16	chr11	+	2517	11	ISM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	16	2383	16	92	intron_retention	FALSE	canonical	3	550	junction_4	58.4468989767635	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATGTTCAGTACTTT	33	False	NA	NA	False	NA	NA	NA	98798642	98812379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498
ES.6283.17	chr11	+	4166	11	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	16	2	intron_retention	FALSE	canonical	3	550	junction_4	63.7836969765786	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGGGCTGCATTTGTT	33	False	NA	10	True	AATATA	-19	NA	98798642	98812721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.18	chr11	+	2450	12	NNC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	191.25107896849	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	35	False	NA	7	True	AATATA	-16	NA	98798644	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811538_98811941
ES.6283.19	chr11	+	2065	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	21	2528	21	-53	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTGTGGTGACTTTT	38	False	NA	10	True	CATAAA	-12	NA	98798647	98812234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.2	chr11	+	4628	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	-8	-6	-8	2	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTCTGCCATTTCTGG	9	False	NA	NA	False	AATAAA	-24	NA	98798618	98814768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.20	chr11	+	2348	11	NIC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	245.592772694964	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTCTGGGCTGCATT	41	False	NA	6	True	AATATA	-15	NA	98798650	98812717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.22	chr11	+	5346	9	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	564	junction_6	60.8702513548285	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	6	False	NA	7	True	AATATA	-16	NA	98798664	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.23	chr11	+	4421	10	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	12	-1	intron_retention	FALSE	canonical	3	550	junction_4	61.2682827336935	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	12	False	NA	7	True	AATATA	-16	NA	98798686	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498
ES.6283.26	chr11	+	4693	11	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	12	-2	intron_retention	FALSE	canonical	3	550	junction_4	58.5853223939239	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTCTGGGCTGCATT	12	False	NA	6	True	AATATA	-15	NA	98798686	98812717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98810232_98811498_98811640_98811941
ES.6283.3	chr11	+	2580	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	-6	2040	-6	3	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGGCTGCATTTGTTG	11	False	NA	11	True	AATATA	-20	NA	98798620	98812722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.4	chr11	+	2237	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	-6	2383	-6	92	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATGTTCAGTACTTT	11	False	NA	NA	False	NA	NA	NA	98798620	98812379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ES.6283.5	chr11	+	2395	11	ISM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	-4	2525	-4	-50	intron_retention	FALSE	canonical	3	550	junction_4	58.4468989767635	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTGACTTTTATG	13	False	NA	13	True	CATAAA	-15	NA	98798622	98812237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498
ES.6283.6	chr11	+	2575	12	NNC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	241.586149786355	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGTCTGGGCTGCATTT	15	False	NA	7	True	AATATA	-16	NA	98798624	98812718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811646_98811941
ES.6283.7	chr11	+	2638	10	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	1	92	intron_retention	FALSE	canonical	3	550	junction_3	61.3703591944378	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATGTTCAGTACTTT	18	False	NA	NA	False	NA	NA	NA	98798627	98812379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498
ES.6283.8	chr11	+	6234	10	NIC	ENSMUSG00000017499.16	novel	4614	12	NA	NA	2	-2	intron_retention	FALSE	canonical	1	4	junction_9	205.057053186981	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAAGATGCCTCTGCC	19	False	NA	NA	False	AATAAA	-16	NA	98798628	98814760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98807845_98810028_98810232_98811941
ES.6284.1	chr11	+	3250	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	-92	-778	-92	-2	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCTTGCCTCTCTGC	8714	False	NA	12	True	AATAAA	-17	NA	98818551	98865766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.11	chr11	+	3253	9	NNC	ENSMUSG00000037992.17	novel	3384	10	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.0032761519722	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	NA	False	NA	11	True	AATAAA	-16	NA	98828502	98865765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861130_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.12	chr11	+	2470	9	NNC	ENSMUSG00000037992.17	novel	2469	9	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	89.3416895967387	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	NA	False	NA	5	True	NA	NA	NA	98828513	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863345_98863497_98864245
ES.6284.13	chr11	+	2463	9	NNC	ENSMUSG00000037992.17	novel	2469	9	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	93.0032761519722	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	NA	False	NA	5	True	NA	NA	NA	98828514	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861130_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.14	chr11	+	3563	9	NIC	ENSMUSG00000037992.17	novel	3384	10	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_2	109.765374777295	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGCCTCTTGCCTCTC	NA	False	NA	9	True	AATAAA	-14	NA	98828534	98865763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98828706_98838396_98838552_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.16	chr11	+	3112	9	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	1902	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	90.0728004172181	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	NA	False	NA	14	True	AATAAA	-19	NA	98832439	98865768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98832485_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.17	chr11	+	2735	9	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	1951	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.3517432039914	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTATACTGAAGGAATT	NA	False	NA	3	True	NA	NA	NA	98832488	98864985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98832940_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.18	chr11	+	3265	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	-804	777	-804	3	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGAAGGAATTTGTGCT	6634	False	NA	9	True	NA	NA	NA	98850433	98864991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.19	chr11	+	3996	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	-758	0	-758	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	6680	False	NA	14	True	AATAAA	-19	NA	98850479	98865768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.2	chr11	+	2378	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	3	-1	3	1	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACTGAAGGAATTTGTG	8809	False	NA	7	True	NA	NA	NA	98818646	98864989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.20	chr11	+	3386	7	NIC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	-754	-1	intron_retention	FALSE	canonical	3	97	junction_1	59.0378880230503	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	6684	False	NA	5	True	NA	NA	NA	98850483	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.22	chr11	+	2526	9	NNC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	19	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.727593377927	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGAAGGAATTTGTGCT	7457	False	NA	9	True	NA	NA	NA	98851256	98864991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98851960_98855978_98856063_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.23	chr11	+	2381	8	NNC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	94.2443632266673	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	7459	False	NA	5	True	NA	NA	NA	98851258	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862462_98862613_98863337_98863497_98864245
ES.6284.24	chr11	+	3205	8	NNC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	108.069894238943	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTCTTGCCTCTCT	7463	False	NA	10	True	AATAAA	-15	NA	98851262	98865764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863345_98863501_98864245
ES.6284.25	chr11	+	4236	5	NIC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	34	0	intron_retention	FALSE	canonical	3	97	junction_1	66.863667264068	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7472	False	NA	6	True	NA	NA	NA	98851271	98864988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98863497_98864245
ES.6284.26	chr11	+	4376	7	NIC	ENSMUSG00000037992.17	novel	3238	8	NA	NA	51	-1	intron_retention	FALSE	canonical	3	97	junction_1	59.2058555662642	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	7489	False	NA	5	True	NA	NA	NA	98851288	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98851960_98857172_98857322_98858870_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.28	chr11	+	2006	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	2459	-1	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	87.112406857872	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	9897	False	NA	5	True	NA	NA	NA	98853696	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98853968_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.29	chr11	+	2597	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	3585	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	87.8077677750246	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTCTTGCCTCTCT	NA	False	NA	10	True	AATAAA	-15	NA	98854822	98865764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98854908_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.3	chr11	+	2380	9	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.101141763541	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTATACTGAAGGAATT	8832	False	NA	3	True	NA	NA	NA	98818669	98864985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864216
ES.6284.30	chr11	+	2581	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	4428	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	85.0267664938998	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTCTTGCCTCTCTGC	NA	False	NA	12	True	AATAAA	-17	NA	98855665	98865766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98855733_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.31	chr11	+	1772	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	4457	-2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	85.0267664938998	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATACTGAAGGAATTT	NA	False	NA	4	True	NA	NA	NA	98855694	98864986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98855733_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.32	chr11	+	1877	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	4526	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	87.8077677750246	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	NA	False	NA	5	True	NA	NA	NA	98855763	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98855906_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.33	chr11	+	1520	1	NIC	ENSMUSG00000037992.17	novel	3384	10	NA	NA	13007	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTCTTGCCTCTCT	474	False	NA	10	True	AATAAA	-15	NA	98864244	98865764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98864200_98865800
ES.6284.4	chr11	+	3413	9	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	-4603	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.3517432039914	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGCCTCTTGCCTCTC	NA	False	NA	9	True	AATAAA	-14	NA	98823920	98865763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98824272_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.5	chr11	+	3340	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-91	-780	-91	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	NA	False	NA	14	True	AATAAA	-19	NA	98828432	98865768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.6	chr11	+	2558	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	-90	1	-90	-1	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	NA	False	NA	5	True	NA	NA	NA	98828433	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.7	chr11	+	2615	10	NNC	ENSMUSG00000037992.17	novel	3384	10	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	105.535670641626	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	NA	False	NA	5	True	NA	NA	NA	98828456	98864987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_98828706_98841070_98841622_98842718_98842799_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.8	chr11	+	3127	8	NIC	ENSMUSG00000037992.17	novel	3384	10	NA	NA	-31	-4	combination_of_known_splicesites	TRUE	canonical	1	3	junction_2	92.7808477773603	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCCTCTTGCCTCTCT	NA	False	NA	10	True	AATAAA	-15	NA	98828492	98865764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98828706_98841070_98841622_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ES.6284.9	chr11	+	4312	6	NIC	ENSMUSG00000037992.17	novel	2469	9	NA	NA	-31	0	intron_retention	FALSE	canonical	3	106	junction_2	68.8244142728436	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98828492	98864988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98863497_98864245
ES.6285.1	chr11	-	176	1	Intergenic	novelGene_5086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	98837701	98837525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98837500_98837700
ES.6286.1	chr11	-	1164	1	FSM	ENSMUSG00000047197.2	ENSMUST00000062931.2	837	1	99	-426	99	426	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATGTGTATGCTTGT	NA	False	NA	NA	False	NA	NA	NA	98873743	98872579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98872600_98873700
ES.6287.1	chr11	-	169	1	Intergenic	novelGene_5087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAATTTAAAGTGTCC	NA	False	NA	NA	False	AATAAA	-7	NA	98880719	98880550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98880600_98880700
ES.6288.1	chr11	+	137	1	Intergenic	novelGene_5088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATCTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98881231	98881368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98881200_98881400
ES.6289.1	chr11	+	2791	1	Antisense	novelGene_ENSMUSG00000020914.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACTCAAGGTTTCCCAC	5270	False	NA	NA	False	ATTAAA	-14	NA	98896462	98899253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_98896500_98899300
ES.6289.2	chr11	+	179	1	Intergenic	novelGene_5089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTATGAACA	6186	False	NA	NA	False	NA	NA	NA	98897378	98897557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98897400_98897600
ES.6289.3	chr11	+	221	1	Intergenic	novelGene_5090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGT	7720	False	NA	NA	False	NA	NA	NA	98898912	98899133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98898900_98899100
ES.629.1	chr1	-	172	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	63221454	63221282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63221300_63221500
ES.6290.1	chr11	-	5621	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-50	0	intron_retention	FALSE	canonical	3	1094	junction_3	172.605656925746	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915065	98883768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.102	chr11	-	4671	26	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	7502	-7	intron_retention	FALSE	canonical	3	1094	junction_2	186.239347077893	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98905534	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513
ES.6290.103	chr11	-	4992	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	361.819737564646	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915016	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.108	chr11	-	5319	34	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-8	intron_retention	FALSE	canonical	0	0	junction_21	456.891342450527	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCATCCATTCCTCTT	NA	False	NA	-8	True	AATAAA	-14	NA	98915016	98883776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900614_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.110	chr11	-	4364	20	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3591	-9	intron_retention	FALSE	canonical	3	1404	junction_16	136.858885610826	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98900939	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98885233_98886069_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853
ES.6290.111	chr11	-	5878	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	8	-9	intron_retention	FALSE	canonical	3	1094	junction_3	174.831315789581	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98914996	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.113	chr11	-	6313	35	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5	-9	intron_retention	TRUE	canonical	0	0	junction_9	417.204016251606	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915010	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98890313_98890513_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.114	chr11	-	5088	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	1	2	junction_17	353.601320131325	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915016	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.115	chr11	-	4103	24	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-5587	-9	intron_retention	FALSE	canonical	0	0	junction_17	380.213033509718	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98902935	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98900026_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846
ES.6290.116	chr11	-	7432	33	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	1094	junction_3	168.109452696562	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915016	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.118	chr11	-	5555	35	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-9	intron_retention	FALSE	canonical	0	0	junction_14	321.033383608315	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915016	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894779_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.123	chr11	-	5194	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	345.692603806519	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915006	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900859_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.125	chr11	-	6623	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	1094	junction_4	185.788111348221	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915006	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.126	chr11	-	6995	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-9	intron_retention	FALSE	canonical	3	1094	junction_3	175.200858101559	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915016	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.129	chr11	-	5516	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-9	intron_retention	FALSE	canonical	3	1184	junction_1	165.340991888327	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915017	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.130	chr11	-	5215	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	322.423496383884	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915017	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897891_98897988_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.131	chr11	-	5578	12	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1505	-9	intron_retention	FALSE	canonical	3	1547	junction_11	125.92769800154	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98895843	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98886551_98886675_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937
ES.6290.132	chr11	-	5195	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	424.451373143338	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915013	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884232_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894779_98894933_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.134	chr11	-	5152	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	348.917654749539	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCCATCCATTCCTCT	NA	False	NA	-9	True	AATAAA	-13	NA	98915016	98883777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900087_98900411_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.140	chr11	-	5426	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-11	intron_retention	FALSE	canonical	2	4	junction_2	314.363113494258	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915016	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.142	chr11	-	5276	37	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	426.080942000229	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915016	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98898657_98898726_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.144	chr11	-	5128	20	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5	-11	intron_retention	FALSE	non_canonical	0	0	junction_15	452.167283289672	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915010	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98896567_98909488_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.145	chr11	-	3652	25	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-4458	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	494.387914215368	1893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98901806	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894948_98895170_98896828_98896978_98897785_98897906_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731
ES.6290.146	chr11	-	5557	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-11	intron_retention	FALSE	canonical	3	459	junction_1	262.799623046302	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915016	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.147	chr11	-	4786	34	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	371.427447752566	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915016	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888679_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.148	chr11	-	4977	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-11	combination_of_known_splicesites	FALSE	canonical	1	2	junction_31	369.446017520276	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAAGCCATCCATTCCT	NA	False	NA	-11	True	AATAAA	-11	NA	98915016	98883779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.151	chr11	-	4846	16	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1800	-13	intron_retention	FALSE	canonical	3	1545	junction_15	127.045818506553	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCAAGCCATCCATTC	NA	False	NA	-13	True	AATAAA	-9	NA	98899148	98883781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006
ES.6290.153	chr11	-	5239	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	348.925632682463	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCAAGCCATCCATTC	NA	False	NA	-13	True	AATAAA	-9	NA	98915016	98883781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900998_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.156	chr11	-	5137	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-13	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_17	321.089314296041	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCAAGCCATCCATTC	NA	False	NA	-13	True	AATAAA	-9	NA	98915016	98883781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896906_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.159	chr11	-	5256	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-15	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_9	344.995526738229	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915018	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890224_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.16	chr11	-	5422	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	intron_retention	FALSE	canonical	1	2	junction_30	323.604450248116	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.162	chr11	-	6458	33	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1	-15	intron_retention	FALSE	canonical	0	0	junction_22	330.792490656907	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915014	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901886_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.166	chr11	-	5117	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	357.859060160247	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915005	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886494_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.167	chr11	-	8388	33	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-15	intron_retention	FALSE	canonical	3	633	junction_3	228.453351023245	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915017	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98909768_98912536_98913257_98913665_98913819_98914871
ES.6290.170	chr11	-	5188	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	347.020159386178	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915006	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891672_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.175	chr11	-	5781	33	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	-15	intron_retention	FALSE	canonical	3	633	junction_3	226.061417867883	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915015	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98898122_98900055_98900149_98900415_98900526_98900618_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.180	chr11	-	5121	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	385.238726940444	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915006	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896813_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.181	chr11	-	2825	13	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	670.836847816881	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915006	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890888_98909431_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.183	chr11	-	6122	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-15	intron_retention	FALSE	canonical	3	1094	junction_3	175.095833657421	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATGCAAGCCATCCAT	NA	False	NA	-15	True	AATAAA	-7	NA	98915016	98883783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98913257_98913665_98913819_98914871
ES.6290.186	chr11	-	5056	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-18	combination_of_known_splicesites	FALSE	canonical	1	2	junction_31	352.514703121664	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAACAATGCAAGCCATC	NA	False	NA	-18	True	AATAAA	-4	NA	98915017	98883786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.187	chr11	-	5094	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	229.626625065073	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTGTCTCTTATTT	NA	False	NA	-123	True	NA	NA	NA	98915014	98883891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.188	chr11	-	5060	35	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-20	531	-20	-7	5prime_fragment	FALSE	canonical	3	1094	junction_3	172.605656925746	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTGCCTCCTTTCCT	NA	False	NA	1	True	ATTAAA	-27	NA	98915035	98884299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.195	chr11	-	4685	34	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-1	1158	-1	-634	5prime_fragment	FALSE	canonical	3	1094	junction_2	171.394009043747	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTTGCACCATGTG	NA	False	NA	NA	False	AGTAAA	-17	NA	98915016	98884926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.196	chr11	-	4427	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-891	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	222.763328353517	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACCAAATCAGATTCAG	NA	False	NA	NA	False	AAAAAG	-15	NA	98915018	98885183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.197	chr11	-	4244	31	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-45	2907	-45	-2383	5prime_fragment	FALSE	canonical	3	1327	junction_22	152.760309708452	1857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTTTATCTAATGA	NA	False	NA	2	True	NA	NA	NA	98915060	98886675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.199	chr11	-	6611	24	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-56	intron_retention	FALSE	canonical	3	1327	junction_15	137.520165216632	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGCAGAGAGGACAGTC	NA	False	NA	NA	False	NA	NA	NA	98915006	98890828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98891678_98891799_98891959_98892175_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.2	chr11	-	5267	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-46	0	-46	0	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915061	98883768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.20	chr11	-	5199	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	404.01865384294	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915017	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884232_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897896_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.200	chr11	-	3588	27	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	8	7880	-3	-876	5prime_fragment	FALSE	canonical	3	1327	junction_18	146.463881687784	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCATCAGATCTGTGGA	NA	False	NA	NA	False	ATTAAA	-7	NA	98915007	98891648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.201	chr11	-	3346	25	ISM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	-1	8470	-1	-1466	5prime_fragment	FALSE	canonical	3	1327	junction_16	148.202470364776	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGATTCAGAGAGGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	98915016	98892238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.202	chr11	-	4763	24	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-4	-1484	intron_retention	FALSE	canonical	3	1327	junction_15	151.311843892272	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAATTAATTAAAGT	NA	False	NA	NA	False	AATAAA	-4	NA	98915019	98892256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.22	chr11	-	6878	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	1094	junction_4	182.939883199514	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915017	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.24	chr11	-	5143	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	2	15	junction_19	324.113067118277	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915034	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.25	chr11	-	4904	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-15	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	399.177869543787	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915030	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.3	chr11	-	5165	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	459	junction_1	255.273980064477	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915047	98883768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.31	chr11	-	5211	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	309.704696741385	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915017	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884232_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.33	chr11	-	4981	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	331.021234743694	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.36	chr11	-	6459	33	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-4	intron_retention	FALSE	canonical	0	0	junction_29	335.781591728537	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915017	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909766_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.39	chr11	-	5097	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	322.41498927023	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905554_98905770_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.40	chr11	-	4981	35	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_30	417.649831183839	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCCATTCCTCTTATTT	NA	False	NA	-4	True	AATAAA	-18	NA	98915016	98883772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907009_98909700_98909766_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.45	chr11	-	4662	32	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	368.790000564182	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCCATTCCTCTTATT	NA	False	NA	-5	True	AATAAA	-17	NA	98915014	98883773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98906916_98913665_98913819_98914871
ES.6290.49	chr11	-	7802	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5	-6	intron_retention	FALSE	canonical	3	1094	junction_4	187.666522319866	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98914999	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.52	chr11	-	3869	23	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-5530	-6	intron_retention	TRUE	non_canonical	0	0	junction_18	388.545457204237	1893	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98902878	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898104_98900663_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846
ES.6290.55	chr11	-	5054	15	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1117	-6	intron_retention	FALSE	canonical	3	459	junction_1	432.648234594756	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98896231	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937
ES.6290.56	chr11	-	4777	11	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	1950	-6	intron_retention	FALSE	canonical	3	1547	junction_10	133.612461993633	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98895398	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937
ES.6290.60	chr11	-	6364	33	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	2	-6	intron_retention	FALSE	canonical	3	459	junction_1	302.23631166016	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915013	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.62	chr11	-	8166	31	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	1094	junction_2	178.836971072042	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915018	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.65	chr11	-	5783	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-6	intron_retention	FALSE	canonical	3	1094	junction_4	186.428212386705	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915018	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98913257_98913665_98913819_98914871
ES.6290.68	chr11	-	7976	31	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5	-6	intron_retention	FALSE	canonical	1	1	junction_21	337.631712570566	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98914999	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.72	chr11	-	5548	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	633	junction_4	232.878564074791	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915016	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.74	chr11	-	3985	20	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3351	-6	intron_retention	FALSE	canonical	3	1404	junction_17	136.764573177612	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98900699	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618
ES.6290.75	chr11	-	5230	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	476.76066301229	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915015	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886214_98886506_98886551_98886671_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905511_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.76	chr11	-	4940	35	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	386.982802520173	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	98915013	98883774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98894318_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.78	chr11	-	6373	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	1094	junction_3	175.195071652467	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915016	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.80	chr11	-	5696	28	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5979	-7	intron_retention	FALSE	canonical	3	1094	junction_2	185.091509640543	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98907057	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884762_98885032_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853
ES.6290.81	chr11	-	5559	35	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-2	-7	intron_retention	FALSE	non_canonical	0	0	junction_19	321.033383608315	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915017	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900422_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.82	chr11	-	5414	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	348.800170848114	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915007	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901088_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.83	chr11	-	6028	34	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	2	-7	intron_retention	FALSE	canonical	3	459	junction_1	297.638356681775	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915013	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.84	chr11	-	5155	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	387.871287297995	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915018	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898151_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.95	chr11	-	5458	34	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	5	-7	intron_retention	FALSE	non_canonical	0	0	junction_18	420.832444970832	1896	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915010	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898118_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901702_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6290.97	chr11	-	5080	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	-1	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	316.366641851072	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCATCCATTCCTCTTA	NA	False	NA	-7	True	AATAAA	-15	NA	98915016	98883775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ES.6291.1	chr11	-	170	1	Intergenic	novelGene_5091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAATAAAACAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	98920747	98920577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98920600_98920700
ES.6292.1	chr11	-	178	1	Intergenic	novelGene_5092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAGGATTTG	NA	False	NA	NA	False	NA	NA	NA	98924846	98924668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98924700_98924800
ES.6293.1	chr11	+	2091	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	2	1738	2	734	multi-exon	FALSE	canonical	2	10	junction_3	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGTGTTTGTTTGATT	4231	False	NA	27	True	AAAAAG	-8	NA	98932071	98943480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
ES.6294.1	chr11	+	176	1	Intergenic	novelGene_5094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAGAGAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98984980	98985156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_98985000_98985200
ES.6295.1	chr11	-	172	1	Antisense	novelGene_ENSMUSG00000017493.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAACAAC	NA	False	NA	0	True	NA	NA	NA	98945090	98944918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_98944900_98945100
ES.6295.2	chr11	-	168	2	Intergenic	novelGene_5093	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAATTAAAAAAACA	4552	False	NA	-2	True	NA	NA	NA	98999009	98944920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_98945040_98998960
ES.6296.1	chr11	+	198	1	Intergenic	novelGene_5095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGGGTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	99001821	99002019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99001800_99002000
ES.6297.1	chr11	+	178	1	Intergenic	novelGene_5096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTCTAGCTAAATT	NA	False	NA	6	True	NA	NA	NA	99002678	99002856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99002700_99002900
ES.6298.1	chr11	+	3130	1	Antisense	novelGene_ENSMUSG00000037944.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCACATGTATGAATTACT	NA	False	NA	NA	False	AATAAA	-16	NA	99034368	99037498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_99034400_99037500
ES.6299.1	chr11	+	201	1	Intergenic	novelGene_5097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGCACTCACTTGATA	37	False	NA	NA	False	NA	NA	NA	99047357	99047558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99047400_99047600
ES.63.1	chr1	-	7141	12	NIC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	6863	8	intron_retention	FALSE	canonical	1	5	junction_8	12.0261423230209	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9763016	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9741803_9742542_9742764_9742882_9743325_9743441_9743969_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942
ES.63.10	chr1	-	9678	12	NIC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	16	4	intron_retention	FALSE	canonical	3	18	junction_1	8.11691428565444	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTGGCATTGCTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	9770233	9737635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9746561_9748496_9748731_9752009_9752115_9753321_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.12	chr1	-	4939	15	NNC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	-190	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	11.0573643388671	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTTGGCATTGCTC	NA	False	NA	-6	True	AATAAA	-14	NA	9770624	9737637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755913_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.13	chr1	-	7124	13	NIC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	2	2	intron_retention	FALSE	canonical	0	0	junction_4	12.3107902084129	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTTGGCATTGCTC	NA	False	NA	-6	True	AATAAA	-14	NA	9770432	9737637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.15	chr1	-	5120	16	NNC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	-194	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	12.0044436217039	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGCTGGCTTGGCATTG	NA	False	NA	-9	True	AATAAA	-11	NA	9770628	9737640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755913_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.16	chr1	-	4051	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-331	-1227	-146	-895	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAACCAAACCAAACAGC	NA	False	NA	NA	False	AAAACA	-11	NA	9770580	9738534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.17	chr1	-	3525	14	NIC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	19	-978	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	12.9706085589895	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATGGCACGTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	9770230	9738617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9762942_9763015_9763511_9763618_9770159
ES.63.18	chr1	-	2620	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-360	233	-175	-233	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCACGTTTTTTTCTAT	NA	False	NA	NA	False	AATACA	-10	NA	9770609	9739994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.19	chr1	-	4912	16	NNC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	18	-278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.4622095419178	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAATTAATTCTTT	NA	False	NA	NA	False	AATGAA	-2	NA	9770416	9740039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9753510_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.2	chr1	-	3281	6	NNC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	2424	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.1619207736804	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	2002	False	NA	0	True	AATAAA	-20	NA	9746411	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9742436_9742542_9742764_9742857_9743325_9743441_9743969_9744113_9746191
ES.63.20	chr1	-	1380	6	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-367	15843	-182	-3517	5prime_fragment	FALSE	canonical	3	29	junction_5	4.83321838943783	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTACTCTTTAATTCAT	NA	False	NA	NA	False	AATATA	-13	NA	9770616	9755604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.21	chr1	-	2634	1	NIC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	-5073	-4029	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATATATTTGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	9758750	9756116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9756100_9758800
ES.63.22	chr1	-	177	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTATGAG	NA	False	NA	NA	False	NA	NA	NA	9763270	9763093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9763100_9763300
ES.63.23	chr1	-	155	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	9765048	9764893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9764900_9765000
ES.63.3	chr1	-	5210	16	FSM	ENSMUSG00000025912.17	ENSMUST00000088658.11	4980	16	-222	-8	-222	8	multi-exon	FALSE	canonical	1	5	junction_10	11.7158961339806	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9770656	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.4	chr1	-	7499	16	NNC	ENSMUSG00000025912.17	novel	4980	16	NA	NA	-161	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	12.4622095419178	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9770595	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9753510_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.5	chr1	-	7352	15	NNC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	-194	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	11.6156562185593	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9770628	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9753510_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.6	chr1	-	5017	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-394	-2130	-209	8	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCATTGCTCATTTCA	NA	False	NA	0	True	AATAAA	-20	NA	9770643	9737631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ES.63.7	chr1	-	4622	3	NIC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	3852	6	intron_retention	FALSE	canonical	3	18	junction_1	6	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCATTGCTCATTT	3430	False	NA	-2	True	AATAAA	-18	NA	9744983	9737633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9742436_9743441_9743969
ES.63.9	chr1	-	6847	12	NIC	ENSMUSG00000025912.17	novel	2493	15	NA	NA	6908	4	intron_retention	FALSE	canonical	3	18	junction_1	8.42075358320684	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTTGGCATTGCTCAT	NA	False	NA	-4	True	AATAAA	-16	NA	9762971	9737635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9756036_9757785_9758007_9760305_9760399_9762942
ES.630.1	chr1	-	178	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAAGTGAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	63233692	63233514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63233500_63233700
ES.6300.1	chr11	-	176	1	Intergenic	novelGene_5098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCCGGGGTACACTG	NA	False	NA	NA	False	NA	NA	NA	99063162	99062986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_99063000_99063200
ES.6301.1	chr11	+	158	1	Intergenic	novelGene_5099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAATAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99102115	99102273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99102100_99102300
ES.6302.1	chr11	-	6994	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	227	0	intron_retention	FALSE	canonical	3	598	junction_2	53.991768920004	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	-2	True	AATAAA	-15	NA	99121616	99099872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.10	chr11	-	1377	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_9	208.072874223562	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121298	99100817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99121227
ES.6302.11	chr11	-	1979	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	-5	945	-5	0	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121848	99100817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.13	chr11	-	5631	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	202.775836824805	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121274	99100817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99112862_99112937_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.14	chr11	-	6205	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	66	-5	intron_retention	FALSE	canonical	3	598	junction_2	53.991768920004	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTATGTGGTCTGTGT	NA	False	NA	-6	True	AATGAA	-31	NA	99121777	99100822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.16	chr11	-	1859	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGTTATGTGGTCTGT	NA	False	NA	-8	True	AATGAA	-29	NA	99121840	99100824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
ES.6302.17	chr11	-	1232	9	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	5	-8	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	279.936599965064	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGTTATGTGGTCTG	NA	False	NA	-9	True	AATGAA	-28	NA	99121266	99100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99121227
ES.6302.19	chr11	-	1956	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	202.31660831479	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGTTATGTGGTCTG	NA	False	NA	-9	True	AATGAA	-28	NA	99121848	99100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104142_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.2	chr11	-	2923	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	-4	0	-4	0	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	-2	True	AATAAA	-15	NA	99121847	99099872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.20	chr11	-	4119	5	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-1948	-8	intron_retention	FALSE	canonical	3	600	junction_2	63.6685754513166	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGTTATGTGGTCTG	NA	False	NA	-9	True	AATGAA	-28	NA	99113605	99100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104962_99105939_99106113_99110045_99110573_99111480
ES.6302.21	chr11	-	1732	8	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	33	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	240.00467682518	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTGTTATGTGGTCTG	NA	False	NA	-9	True	AATGAA	-28	NA	99121810	99100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99121227
ES.6302.22	chr11	-	2864	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	3	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	202.775836824805	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGTGTTATGTGG	NA	False	NA	-13	True	AATGAA	-24	NA	99121840	99100829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99114958_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.23	chr11	-	1375	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	6	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	203.397369697841	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121265	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119367_99121227
ES.6302.24	chr11	-	1583	11	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	3	-13	combination_of_known_junctions	FALSE	canonical	1	8	junction_10	201.070161883856	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121236	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99120998
ES.6302.25	chr11	-	3091	9	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-20	-13	intron_retention	FALSE	canonical	3	612	junction_8	48.7209849551505	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121292	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.26	chr11	-	1292	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-4	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	214.476681514752	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121276	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.27	chr11	-	2658	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	6	-13	intron_retention	FALSE	canonical	3	600	junction_2	50.4816309337208	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121837	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.28	chr11	-	1365	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	10	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	202.74774967925	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121261	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119131_99119322_99119375_99121227
ES.6302.29	chr11	-	1431	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	63	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	203.397369697841	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTAATGGTGTTATGTG	NA	False	NA	-14	True	AATGAA	-23	NA	99121780	99100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121694
ES.6302.3	chr11	-	3061	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	600	junction_2	50.4816309337208	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	-2	True	AATAAA	-15	NA	99121282	99099872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.30	chr11	-	4981	6	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-3062	-37	intron_retention	FALSE	canonical	3	600	junction_2	57.3396895701398	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGTGGTTTTTT	NA	False	NA	-38	True	AGTAAA	-40	NA	99114719	99100854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480
ES.6302.31	chr11	-	1928	10	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	565	3268	-6	-2323	5prime_fragment	FALSE	canonical	3	598	junction_1	37.8430808131698	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGGTTGGTTTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	99121278	99103140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.4	chr11	-	2815	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-4	-3	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCAGTGTTTTTAT	NA	False	NA	-5	True	AATAAA	-12	NA	99121847	99099875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
ES.6302.5	chr11	-	2283	10	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.869525190663	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTCTCAGTGTTTTTAT	NA	False	NA	-5	True	AATAAA	-12	NA	99121266	99099875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110214_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99121227
ES.6302.6	chr11	-	2885	11	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	202.31660831479	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTCTCAGTGTTTTT	NA	False	NA	-7	True	AATAAA	-10	NA	99121829	99099877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101104_99103945_99104142_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.8	chr11	-	2745	12	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	16	-26	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	192.627203866488	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACATAATAAAGAAATTAA	NA	False	NA	-28	True	NA	NA	NA	99121827	99099898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99100767_99100898_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ES.6302.9	chr11	-	3706	7	NNC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	-2460	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	245.603169089217	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTCTGTGTATTAATT	NA	False	NA	1	True	AATGAA	-38	NA	99114117	99100815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_99101099_99103949_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480
ES.6303.1	chr11	+	1744	1	Intergenic	novelGene_5100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	99132703	99134447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99132700_99134400
ES.6304.1	chr11	-	3368	6	FSM	ENSMUSG00000035849.15	ENSMUST00000038214.7	2042	6	-201	-1125	-201	-4	multi-exon	FALSE	canonical	0	0	junction_5	2.24499443206436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTAAGGCTTCCTTG	9974	False	NA	NA	False	AATAAA	-15	NA	99135112	99123590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99125974_99126962_99127096_99127290_99127368_99129359_99129581_99131318_99131448_99134687
ES.6304.2	chr11	-	2306	6	FSM	ENSMUSG00000035849.15	ENSMUST00000038214.7	2042	6	-251	-13	-251	13	multi-exon	FALSE	canonical	0	0	junction_5	2.24499443206436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAAGTTGTTTTCTGGTTTT	9924	False	NA	NA	False	AATAAA	-43	NA	99135162	99124702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99125974_99126962_99127096_99127290_99127368_99129359_99129581_99131318_99131448_99134687
ES.6304.3	chr11	-	1776	6	FSM	ENSMUSG00000035849.15	ENSMUST00000103132.10	3072	6	-217	1513	-199	-384	multi-exon	FALSE	canonical	1	2	junction_1	1.35646599662505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTTATCTTAAAGCTT	9976	False	NA	NA	False	AATAAA	-14	NA	99135110	99125099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99125974_99126962_99127096_99127290_99127368_99129359_99129581_99131318_99131448_99134768
ES.6304.4	chr11	-	1270	6	FSM	ENSMUSG00000035849.15	ENSMUST00000103132.10	3072	6	-104	1906	-86	276	multi-exon	FALSE	canonical	1	2	junction_1	1.35646599662505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTTTATTTGTCATC	6710	False	NA	NA	False	AATAAA	-18	NA	99134997	99125492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_99125974_99126962_99127096_99127290_99127368_99129359_99129581_99131318_99131448_99134768
ES.6305.1	chr11	+	180	1	Intergenic	novelGene_5101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAATTATACTGG	NA	False	NA	NA	False	NA	NA	NA	99135414	99135594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99135400_99135600
ES.6306.1	chr11	-	177	1	Intergenic	novelGene_5102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATAGATAG	2907	False	NA	NA	False	NA	NA	NA	99142179	99142002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_99142000_99142200
ES.6307.1	chr11	+	3845	1	Genic_Genomic	ENSMUSG00000087692.2	novel	NA	NA	NA	NA	-1348	1939	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTAGTGTTAAGAAATTG	NA	False	NA	NA	False	AGTAAA	-18	NA	99276817	99280662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_99276800_99280700
ES.6307.2	chr11	+	933	1	Antisense	novelGene_ENSMUSG00000019761.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	99277026	99277959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_99277000_99278000
ES.6308.1	chr11	-	572	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3241	4	-26	-4	3prime_fragment	FALSE	canonical	3	82	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTGTCAGAATTATTA	8313	False	NA	NA	False	AATAAA	-34	NA	99276949	99276083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_99276463_99276756
ES.6308.2	chr11	-	328	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3343	146	76	-133	3prime_fragment	FALSE	canonical	3	82	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTTTCTGTATTTC	8415	False	NA	NA	False	NA	NA	NA	99276847	99276225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_99276463_99276756
ES.6309.1	chr11	-	319	1	Intergenic	novelGene_5103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	99454736	99454417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_99454400_99454700
ES.631.1	chr1	+	662	3	Fusion	ENSMUSG00000086730.3_ENSMUSG00000027520.17	novel	462	2	NA	NA	-86	7906	multi-exon	FALSE	canonical	0	0	junction_1	22	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTAATTCAGTCGG	NA	False	NA	NA	False	CATAAA	-16	NA	63239385	63342087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_63239718_63334164_63334206_63341798
ES.631.10	chr1	+	1470	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63262493	63263963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63262500_63264000
ES.631.11	chr1	+	1976	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	63270531	63272507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63270500_63272500
ES.631.12	chr1	+	177	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	25	False	NA	NA	False	NA	NA	NA	63273241	63273418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63273200_63273400
ES.631.13	chr1	+	141	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAACAAAAA	7603	False	NA	NA	False	NA	NA	NA	63280871	63281012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63280900_63281000
ES.631.14	chr1	+	2552	5	NIC	ENSMUSG00000027520.17	novel	12523	6	NA	NA	67	9737	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	13.8834433769148	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAAAACTGTGTGTCA	9242	False	NA	NA	False	ATTAAA	-21	NA	63312494	63343918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63312632_63317089_63317143_63319925_63320037_63334074_63334206_63341798
ES.631.2	chr1	+	961	7	Fusion	ENSMUSG00000086730.3_ENSMUSG00000027520.17	novel	12112	3	NA	NA	186	7904	multi-exon	FALSE	canonical	2	4	junction_4	14.560219778561	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAGTTAATTCAGTC	NA	False	NA	NA	False	CATAAA	-14	NA	63239657	63342085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_63239834_63246673_63246774_63317089_63317143_63319925_63320037_63329838_63329942_63334074_63334206_63341798
ES.631.3	chr1	+	2504	2	FSM	ENSMUSG00000086730.3	ENSMUST00000141027.2	462	2	274	-2316	-121	1963	multi-exon	FALSE	canonical	3	28	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTTGAGTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	63239745	63249089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63239834_63246673
ES.631.4	chr1	+	903	3	NNC	ENSMUSG00000086730.3	novel	462	2	NA	NA	-108	51277	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	10.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGAGCTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	63239758	63298403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63239834_63246673_63246774_63297675
ES.631.5	chr1	+	753	6	Fusion	ENSMUSG00000086730.3_ENSMUSG00000027520.17	novel	462	2	NA	NA	-104	7904	multi-exon	FALSE	canonical	3	22	junction_2	8.44748483277715	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAGTTAATTCAGTC	NA	False	NA	NA	False	CATAAA	-14	NA	63239762	63342085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_63239834_63246673_63246774_63317089_63317143_63319925_63320037_63334074_63334206_63341798
ES.631.6	chr1	+	1514	4	NNC	ENSMUSG00000086730.3	novel	462	2	NA	NA	-104	54954	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	11.8977121983832	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGACTCTTTTGTATT	NA	False	NA	NA	False	ATTAAA	-12	NA	63239762	63302080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63239834_63246673_63246774_63297675_63298269_63301330
ES.631.7	chr1	+	769	5	NNC	ENSMUSG00000086730.3	novel	462	2	NA	NA	-104	63396	intron_retention	FALSE	canonical	0	0	junction_3	11.4755174175285	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-39	NA	63239762	63310522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63239834_63246673_63246774_63297675_63297792_63302657_63302715_63310097
ES.631.8	chr1	+	3678	2	FSM	ENSMUSG00000086730.3	ENSMUST00000141027.2	462	2	313	-3529	-82	3176	multi-exon	FALSE	canonical	3	28	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGCTTTAAAAATGGTC	NA	False	NA	NA	False	NA	NA	NA	63239784	63250302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63239834_63246673
ES.631.9	chr1	+	2851	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	63258378	63261229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_63258400_63261200
ES.6310.1	chr11	+	267	1	Intergenic	novelGene_5104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAATTAGATGTAGCT	NA	False	NA	NA	False	AATGAA	-12	NA	99760943	99761210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_99760900_99761200
ES.6311.1	chr11	+	304	1	Intergenic	novelGene_5105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	100033648	100033952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100033600_100034000
ES.6312.1	chr11	-	1389	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	181	6	181	-6	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGATACCTTGCTTA	9780	False	NA	NA	False	AATAAA	-15	NA	100036765	100031641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
ES.6313.1	chr11	-	162	1	Intergenic	novelGene_5106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAAATATTTAAAA	9	True	NA	NA	False	NA	NA	NA	100112023	100111861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100111900_100112000
ES.6314.1	chr11	-	1875	9	NNC	ENSMUSG00000053797.11	novel	1565	8	NA	NA	-5523	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.4790199457749	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGTGATGTCTATG	721	False	NA	NA	False	AATAAA	-17	NA	100145251	100136919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100137155_100137294_100137342_100137435_100137657_100137927_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197_100139969_100145178
ES.6315.1	chr11	-	1594	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	-96	53	-96	-53	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAACTGTGGCCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	100151951	100147095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
ES.6316.1	chr11	-	3346	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	-1805	1	-1805	-1	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGAATTCATCATTTG	NA	False	NA	-12	True	AATAAA	-17	NA	100162502	100153713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
ES.6316.2	chr11	-	1288	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1848	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	29.6858552175948	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100162545	100153715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100162468
ES.6316.3	chr11	-	2751	7	NIC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-78	-3	intron_retention	FALSE	canonical	3	51	junction_4	17.780294960683	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100160775	100153715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100153994_100154119_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
ES.6316.7	chr11	-	4351	6	NIC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1552	-3	intron_retention	FALSE	canonical	3	51	junction_3	19.4730583114209	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTTGAATTCATCATT	NA	False	NA	-14	True	AATAAA	-15	NA	100162249	100153715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
ES.6317.1	chr11	+	4571	2	Antisense	novelGene_ENSMUSG00000086163.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGAAAGAAAGAAAGAA	4202	False	NA	NA	False	NA	NA	NA	100168852	100174171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_100168997_100169744
ES.6318.1	chr11	+	182	1	Intergenic	novelGene_5109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTACATAAACTGGG	NA	False	NA	NA	False	NA	NA	NA	100190015	100190197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100190000_100190200
ES.6319.1	chr11	-	2745	5	NNC	ENSMUSG00000086163.2	novel	747	4	NA	NA	-9666	2934	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACACCGAGCTTGCTTG	1476	False	NA	NA	False	NA	NA	NA	100191778	100166597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100166974_100168083_100169900_100171280_100171409_100171811_100171993_100191534
ES.6319.2	chr11	-	2325	2	Intergenic	novelGene_5107	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACACATCTACAACGT	NA	False	NA	NA	False	NA	NA	NA	100169049	100166682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100168363_100168404
ES.6319.3	chr11	-	163	1	Intergenic	novelGene_5108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATTAAAA	9806	False	NA	NA	False	NA	NA	NA	100183448	100183285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100183300_100183400
ES.6319.4	chr11	-	174	1	Intergenic	novelGene_5110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAAAAAAGTCTTTACT	2559	False	NA	NA	False	NA	NA	NA	100190695	100190521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100190500_100190700
ES.632.1	chr1	+	4713	1	Genic_Genomic	ENSMUSG00000027520.17	novel	NA	NA	NA	NA	19127	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTGTTTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	63349023	63353736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_63349000_63353700
ES.632.2	chr1	+	2580	1	ISM	ENSMUSG00000027520.17	ENSMUST00000239483.2	12523	6	36611	2121	19138	-2120	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATGTTAGAACCTTTT	NA	False	NA	20	True	ATTAAA	-24	NA	63349034	63351614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_63349000_63351600
ES.6320.1	chr11	-	237	1	Intergenic	novelGene_5111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAGTCAGGGGAGGA	9636	False	NA	NA	False	NA	NA	NA	100194655	100194418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100194400_100194700
ES.6321.1	chr11	+	232	1	Intergenic	novelGene_5112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCTTGGAGTCTCCAAG	NA	False	NA	NA	False	NA	NA	NA	100195088	100195320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100195100_100195300
ES.6322.1	chr11	-	204	1	Intergenic	novelGene_5113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCATGAAGGGGTCATG	8656	False	NA	NA	False	NA	NA	NA	100195635	100195431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100195400_100195600
ES.6323.1	chr11	+	136	1	Intergenic	novelGene_5114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACGAAACCAAAAAAA	705	False	NA	NA	False	NA	NA	NA	100207458	100207594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100207500_100207600
ES.6324.1	chr11	+	761	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	11	550	11	13	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTCCCTCATTTAAAC	3968	False	NA	12	True	AATAAA	-26	NA	100210721	100212372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ES.6324.10	chr11	+	2106	1	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	102	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4059	False	NA	17	True	AATAAA	-13	NA	100210812	100212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100210800_100212900
ES.6324.11	chr11	+	1334	3	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	102	-4	intron_retention	FALSE	canonical	3	11207	junction_1	780.5	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4059	False	NA	17	True	AATAAA	-13	NA	100210812	100212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100210987_100211491_100211876_100212142
ES.6324.12	chr11	+	1721	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	-531	-743	102	-4	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4059	False	NA	17	True	AATAAA	-13	NA	100210812	100212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100211656_100211773_100211876_100212142
ES.6324.13	chr11	+	2155	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	-935	102	935	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACAGTAGTACACAGTA	4059	False	NA	NA	False	NA	NA	NA	100210812	100213857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ES.6324.14	chr11	+	1282	2	FSM	ENSMUSG00000035530.14	ENSMUST00000132618.2	383	2	-897	-2	102	2	multi-exon	FALSE	canonical	3	12768	junction_1	0	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4059	False	NA	1	True	AATAAA	-15	NA	100210812	100212361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100211876_100212142
ES.6324.15	chr11	+	993	4	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	102	-9	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	5847.08924736631	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCCATGCTGTGTAG	4059	False	NA	-10	True	AATAAA	-4	NA	100210812	100212350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100211332_100211491_100211656_100211773_100211876_100212142
ES.6324.16	chr11	+	587	4	NNC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	2	164	junction_1	5816.94148347929	1450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTAGTCTTGAAGT	4059	False	NA	-1	True	AATAAA	-13	NA	100210812	100212359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100210987_100211561_100211656_100211773_100211876_100212142
ES.6324.17	chr11	+	3045	1	Genic_Genomic	ENSMUSG00000035530.14	novel	NA	NA	NA	NA	102	935	mono-exon	FALSE	NA	NA	NA	NA	NA	1472	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACAGTAGTACACAGTA	4059	False	NA	NA	False	NA	NA	NA	100210812	100213857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_100210800_100213900
ES.6324.18	chr11	+	1600	2	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	103	4	103	-4	intron_retention	FALSE	canonical	3	11207	junction_1	0	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4060	False	NA	17	True	AATAAA	-13	NA	100210813	100212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100210987_100211491
ES.6324.2	chr11	+	1258	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	69	-5	69	5	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCAGATTGCACTTGGT	4026	False	NA	26	True	AATAAA	-22	NA	100210779	100212927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ES.6324.20	chr11	+	580	4	NNC	ENSMUSG00000035530.14	novel	447	3	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5894.19558171898	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTAGTCTTGAAGT	4522	False	NA	-1	True	AATAAA	-13	NA	100211275	100212359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100211373_100211491_100211656_100211773_100211876_100212142
ES.6324.3	chr11	+	1989	2	FSM	ENSMUSG00000035530.14	ENSMUST00000152521.2	924	2	-722	-343	101	-4	multi-exon	FALSE	canonical	3	12221	junction_1	0	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCCTGATGTCCAGATT	4058	False	NA	17	True	AATAAA	-13	NA	100210811	100212918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100211656_100211773
ES.6324.4	chr11	+	1165	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	-532	-186	101	2	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4058	False	NA	1	True	AATAAA	-15	NA	100210811	100212361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100211656_100211773_100211876_100212142
ES.6324.5	chr11	+	642	4	NNC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	101	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5537.52738643842	1449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCCATGCTGTGTAG	4058	False	NA	-10	True	AATAAA	-4	NA	100210811	100212350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100210987_100211491_100211656_100211773_100211876_100212149
ES.6324.6	chr11	+	3492	1	Genic_Genomic	ENSMUSG00000035530.14	novel	NA	NA	NA	NA	101	1381	mono-exon	FALSE	NA	NA	NA	NA	NA	1486	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCAACTTAAGGGCTGG	4058	False	NA	NA	False	NA	NA	NA	100210811	100214303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_100210800_100214300
ES.6324.7	chr11	+	1431	2	FSM	ENSMUSG00000035530.14	ENSMUST00000152521.2	924	2	-721	214	102	2	multi-exon	FALSE	canonical	3	12221	junction_1	0	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTCTTGAAGTCC	4059	False	NA	1	True	AATAAA	-15	NA	100210812	100212361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100211656_100211773
ES.6324.8	chr11	+	2544	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	-1324	102	1324	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	4059	False	NA	NA	False	NA	NA	NA	100210812	100214246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ES.6325.1	chr11	-	182	1	Intergenic	novelGene_5115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGAGAGTGACAGTGT	NA	False	NA	NA	False	NA	NA	NA	100216691	100216509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100216500_100216700
ES.6326.1	chr11	-	4222	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-820	2	intron_retention	FALSE	canonical	3	5	junction_11	167.530088576686	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCAGTTGTGTTCC	1187	False	NA	0	True	AATAAA	-19	NA	100247774	100238150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247326
ES.6326.10	chr11	-	5241	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	541	junction_9	37.4495545474505	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.11	chr11	-	2930	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	167.808036726739	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2013	False	NA	-2	True	AATAAA	-17	NA	100246948	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.13	chr11	-	3630	11	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_8	176.778279208731	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244941_100245071_100245189_100245497_100245575_100246515
ES.6326.14	chr11	-	3464	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_5	206.801377938725	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2053	False	NA	-2	True	AATAAA	-17	NA	100246908	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243021_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.15	chr11	-	3973	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	10	0	intron_retention	FALSE	canonical	3	486	junction_1	46.7351349576116	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2017	False	NA	-2	True	AATAAA	-17	NA	100246944	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.17	chr11	-	4049	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-658	0	intron_retention	FALSE	canonical	0	0	junction_11	211.974893258378	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	1349	False	NA	-2	True	AATAAA	-17	NA	100247612	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247308
ES.6326.18	chr11	-	5182	11	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	1	0	intron_retention	TRUE	non_canonical	0	0	junction_1	176.871591839956	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2049	False	NA	-2	True	AATAAA	-17	NA	100246912	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100241659_100241717_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.19	chr11	-	3766	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	486	junction_1	47.3328116820499	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2050	False	NA	-2	True	AATAAA	-17	NA	100246911	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.2	chr11	-	4060	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	486	junction_1	49.5692381926533	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCAGTTGTGTTCC	2048	False	NA	0	True	AATAAA	-19	NA	100246913	100238150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.21	chr11	-	2750	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	264.359012518961	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2782	False	NA	-2	True	AATAAA	-17	NA	100246179	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239686_100240062_100240446_100242033_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246136
ES.6326.22	chr11	-	3389	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	225.320928147292	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2050	False	NA	-2	True	AATAAA	-17	NA	100246911	100238152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238496_100238758_100240446_100242033_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.25	chr11	-	5464	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	-255	-2	intron_retention	FALSE	canonical	3	486	junction_1	48.9539005085397	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	1752	False	NA	-4	True	AATAAA	-15	NA	100247209	100238154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.28	chr11	-	3401	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	10	-2	intron_retention	FALSE	non_canonical	2	17	junction_1	213.223004356418	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2017	False	NA	-4	True	AATAAA	-15	NA	100246944	100238154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238491_100238752_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.3	chr11	-	3521	10	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	2	2	intron_retention	FALSE	canonical	3	22	junction_4	172.244084633865	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCAGTTGTGTTCC	2050	False	NA	0	True	AATAAA	-19	NA	100246911	100238150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.30	chr11	-	3627	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	10	-2	intron_retention	FALSE	canonical	3	22	junction_4	176.914350746343	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2017	False	NA	-4	True	AATAAA	-15	NA	100246944	100238154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100244369_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.31	chr11	-	5156	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	-2	intron_retention	FALSE	canonical	3	486	junction_1	36.3401895289499	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2049	False	NA	-4	True	AATAAA	-15	NA	100246912	100238154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.33	chr11	-	4860	10	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	0	-2	intron_retention	FALSE	canonical	3	47	junction_1	171.671520966965	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCCTGTCTCAGTTGTG	2048	False	NA	-4	True	AATAAA	-15	NA	100246913	100238154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.34	chr11	-	3634	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_7	225.307789479192	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2050	False	NA	-5	True	AATAAA	-14	NA	100246911	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244598_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.35	chr11	-	3922	10	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	47	junction_1	171.723291631883	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2047	False	NA	-5	True	AATAAA	-14	NA	100246914	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240428_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.36	chr11	-	4895	10	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	486	junction_1	46.8925748946133	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2030	False	NA	-5	True	AATAAA	-14	NA	100246931	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.37	chr11	-	4704	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	58	junction_1	160.040494875516	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2049	False	NA	-5	True	AATAAA	-14	NA	100246912	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.38	chr11	-	3654	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_2	176.281706367961	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2049	False	NA	-5	True	AATAAA	-14	NA	100246912	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242237_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.39	chr11	-	6230	3	NIC	ENSMUSG00000092509.2	novel	942	2	NA	NA	-3118	2366	intron_retention	FALSE	canonical	3	574	junction_2	43.5	815	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	4128	False	NA	-5	True	AATAAA	-14	NA	100244833	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100242732_100243010_100244614_100244782
ES.6326.4	chr11	-	3300	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	40	1	intron_retention	FALSE	canonical	0	0	junction_1	233.844905867115	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	2792	False	NA	-1	True	AATAAA	-18	NA	100246169	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242033_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246126
ES.6326.41	chr11	-	3160	6	NNC	ENSMUSG00000006930.16	novel	465	4	NA	NA	987	-3	intron_retention	FALSE	non_canonical	2	17	junction_1	266.110803989616	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	5082	False	NA	-5	True	AATAAA	-14	NA	100243879	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238491_100238752_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010
ES.6326.42	chr11	-	2931	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	211.974893258378	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2050	False	NA	-5	True	AATAAA	-14	NA	100246911	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239994_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.43	chr11	-	3136	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	212.617708575744	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2053	False	NA	-5	True	AATAAA	-14	NA	100246908	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.45	chr11	-	4838	10	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_5	182.510950119658	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2051	False	NA	-5	True	AATAAA	-14	NA	100246910	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244401_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.47	chr11	-	3972	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-809	-3	intron_retention	FALSE	canonical	0	0	junction_3	223.978673719155	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1198	False	NA	-5	True	AATAAA	-14	NA	100247763	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242663_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247538
ES.6326.48	chr11	-	3669	14	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-821	-3	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	227.867552103794	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1186	False	NA	-5	True	AATAAA	-14	NA	100247775	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247326
ES.6326.5	chr11	-	3430	14	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-790	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	228.464232048353	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	1217	False	NA	-1	True	AATAAA	-18	NA	100247744	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247538
ES.6326.52	chr11	-	3253	14	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-253	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	251.386498439421	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1754	False	NA	-5	True	AATAAA	-14	NA	100247207	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239686_100240062_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100246763_100246885
ES.6326.53	chr11	-	3552	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	2	-3	intron_retention	FALSE	canonical	3	58	junction_1	156.911089474262	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2050	False	NA	-5	True	AATAAA	-14	NA	100246911	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.54	chr11	-	2985	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	259.765225198105	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	2050	False	NA	-5	True	AATAAA	-14	NA	100246911	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239568_100240062_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245191_100245497_100245575_100246515
ES.6326.55	chr11	-	5006	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	486	junction_1	45.9821636615764	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1996	False	NA	-5	True	AATAAA	-14	NA	100246965	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.56	chr11	-	4608	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	-800	-3	intron_retention	FALSE	canonical	3	58	junction_1	160.095127970841	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1207	False	NA	-5	True	AATAAA	-14	NA	100247754	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.57	chr11	-	3976	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-810	-3	intron_retention	FALSE	canonical	1	1	junction_11	214.664402161969	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCCTGTCTCAGTTGT	1197	False	NA	-5	True	AATAAA	-14	NA	100247764	100238155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100246655_100246885_100247034_100247326
ES.6326.59	chr11	-	3328	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	208.479501340872	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCCTGTCTCAGTTG	1994	False	NA	-6	True	AATAAA	-13	NA	100246967	100238156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239686_100240062_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.6	chr11	-	4212	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-829	1	intron_retention	FALSE	canonical	3	5	junction_11	215.598149304374	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	1178	False	NA	-1	True	AATAAA	-18	NA	100247783	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247326
ES.6326.61	chr11	-	4613	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	0	-5	intron_retention	FALSE	non_canonical	2	17	junction_1	171.889761184313	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2048	False	NA	-7	True	AATAAA	-12	NA	100246913	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238491_100238752_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.62	chr11	-	3061	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	237.185039695921	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2050	False	NA	-7	True	AATAAA	-12	NA	100246911	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100239669_100240062_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.64	chr11	-	3680	9	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	1	-5	intron_retention	FALSE	canonical	1	2	junction_2	194.41189360479	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2049	False	NA	-7	True	AATAAA	-12	NA	100246912	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240446_100242035_100242128_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.66	chr11	-	3187	10	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	226.798708816844	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2048	False	NA	-7	True	AATAAA	-12	NA	100246913	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238491_100238752_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.67	chr11	-	3638	11	NNC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	3	-5	intron_retention	FALSE	non_canonical	0	0	junction_10	176.981948232016	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2051	False	NA	-7	True	AATAAA	-12	NA	100246910	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246521
ES.6326.68	chr11	-	3453	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	3	-5	intron_retention	FALSE	canonical	0	0	junction_10	264.870060143329	815	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGCCCTGTCTCAGTT	2051	False	NA	-7	True	AATAAA	-12	NA	100246910	100238157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240428_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245185_100245497_100245575_100246515
ES.6326.69	chr11	-	3812	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-821	-6	intron_retention	FALSE	canonical	1	1	junction_11	168.642072924673	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCTGCCCTGTCTCAGT	1186	False	NA	-8	True	AATAAA	-11	NA	100247775	100238158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247729
ES.6326.7	chr11	-	4342	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-820	1	intron_retention	FALSE	canonical	3	58	junction_1	152.849301898665	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	1187	False	NA	-1	True	AATAAA	-18	NA	100247774	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.71	chr11	-	2048	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	-54	126	-13	-126	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCCGTCCACCTTCTT	1994	False	NA	NA	False	NA	NA	NA	100246967	100239810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.72	chr11	-	2065	6	ISM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	0	3558	0	-161	5prime_fragment	FALSE	canonical	3	541	junction_5	27.7344551055181	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAGACCTGGGGGAA	2048	False	NA	NA	False	AATAAA	-10	NA	100246913	100243242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.73	chr11	-	1557	6	ISM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	2	4064	2	-667	5prime_fragment	FALSE	canonical	3	541	junction_5	27.7344551055181	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCATCTCTGTCCTTC	2050	False	NA	NA	False	NA	NA	NA	100246911	100243748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.8	chr11	-	3404	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-13	1	intron_retention	FALSE	non_canonical	2	17	junction_1	164.197270993317	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	2035	False	NA	-1	True	AATAAA	-18	NA	100246926	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100238491_100238752_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6326.9	chr11	-	3608	11	NIC	ENSMUSG00000006930.16	novel	2120	11	NA	NA	0	1	intron_retention	FALSE	canonical	3	47	junction_1	212.537643724588	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTCAGTTGTGTTC	2048	False	NA	-1	True	AATAAA	-18	NA	100246913	100238151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100240428_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ES.6327.1	chr11	-	236	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	286	-111	286	111	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	8362	False	NA	NA	False	NA	NA	NA	100252666	100252430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100252400_100252700
ES.6328.1	chr11	+	197	1	Intergenic	novelGene_5117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATGCCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	100282451	100282648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100282500_100282600
ES.6329.1	chr11	-	6457	2	NIC	ENSMUSG00000001552.15	novel	2386	13	NA	NA	-3022	513	intron_retention	FALSE	canonical	3	530	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAAGAAGGGGGGGGGG	6766	False	NA	NA	False	NA	NA	NA	100267973	100259270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100265303_100267548
ES.6329.11	chr11	-	3200	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	145.491291754288	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288575	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274464_100276986_100277215_100288461
ES.6329.12	chr11	-	3241	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	147.811490373349	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288605	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271363_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.14	chr11	-	3290	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_13	142.103221088711	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288645	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288446
ES.6329.15	chr11	-	3172	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	604	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_13	145.266129984625	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100287971	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100287890
ES.6329.16	chr11	-	4050	13	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	399	junction_12	52.7122034152329	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288574	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.18	chr11	-	3378	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-2256	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	146.730522229856	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100279852	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100279565
ES.6329.19	chr11	-	3347	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	144.04798674472	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288633	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288377
ES.6329.2	chr11	-	3611	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-13	-393	1	393	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCACCTCTCCCT	NA	False	NA	NA	False	AATACA	-34	NA	100288588	100261051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.20	chr11	-	3329	15	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	185.459440529817	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288604	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100278636_100278732_100288461
ES.6329.21	chr11	-	3180	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	145.022340658055	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100277630	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277541
ES.6329.22	chr11	-	2919	13	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	2204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	150.520116780301	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100286371	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100286327
ES.6329.24	chr11	-	3780	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.785688943858	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100288586	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262842_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.25	chr11	-	3434	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-2514	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	146.730522229856	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100291103	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100290758
ES.6329.28	chr11	-	3240	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	147.78987162132	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100288606	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273826_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.29	chr11	-	3364	5	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	21217	2	-2407	-2	3prime_fragment	FALSE	canonical	3	472	junction_4	59.4138031100518	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	7381	False	NA	-19	True	AATAAA	-16	NA	100267358	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151
ES.6329.3	chr11	-	3329	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-106	-18	-92	18	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGTGTAGAGGAAGTAA	NA	False	NA	1	True	AATAAA	-36	NA	100288681	100261426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.30	chr11	-	3216	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	186.407075061909	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100288589	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263516_100264899_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276997_100277215_100288461
ES.6329.31	chr11	-	3221	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	656	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	145.266129984625	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100287919	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100287787
ES.6329.32	chr11	-	2962	13	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	473	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	151.094800998873	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100277094	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264910_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998
ES.6329.33	chr11	-	3174	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	147.083963462005	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100288606	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267765_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.34	chr11	-	3143	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	2194	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	144.04798674472	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100286381	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100286327
ES.6329.35	chr11	-	3025	13	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-24	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	150.01222172432	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAGGCTGTTAAAAGCA	NA	False	NA	-19	True	AATAAA	-16	NA	100288613	100261446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100288461
ES.6329.38	chr11	-	3787	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	138.785688943858	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGAGGCTGTTAAAAGC	NA	False	NA	-20	True	AATAAA	-15	NA	100288588	100261447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262842_100263115_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.4	chr11	-	3176	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	146.730522229856	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGCTGTTAAAAGCATTA	NA	False	NA	-16	True	AATAAA	-19	NA	100277608	100261443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277524
ES.6329.42	chr11	-	3145	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	675	-29	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	145.022340658055	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAAAATAACACA	NA	False	NA	19	True	NA	NA	NA	100287900	100261473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100287817
ES.6329.43	chr11	-	3205	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	3	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	147.78987162132	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAAAATAACACA	NA	False	NA	19	True	NA	NA	NA	100288586	100261473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272722_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.44	chr11	-	3120	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	639	-120	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	145.266129984625	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTCCCCTCAGAGAGT	NA	False	NA	-72	True	NA	NA	NA	100287936	100261564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100287787
ES.6329.45	chr11	-	2706	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-143	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	144.04798674472	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCTGCACAGCAATTCT	NA	False	NA	NA	False	ACTAAA	-18	NA	100288575	100262027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288377
ES.6329.46	chr11	-	2656	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	-40	589	-26	-149	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGTCCCTGCACAGC	NA	False	NA	NA	False	ACTAAA	-12	NA	100288615	100262033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ES.6329.47	chr11	-	2643	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-151	combination_of_known_splicesites	FALSE	canonical	3	19	junction_13	142.103221088711	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTGTGTCCCTGCACA	NA	False	NA	NA	False	ACTAAA	-10	NA	100288589	100262035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288446
ES.6329.48	chr11	-	2757	9	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	0	-3514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	156.118344533882	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100288589	100266696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274068_100274220_100274481_100276998_100277215_100288461
ES.6329.49	chr11	-	182	1	Intergenic	novelGene_5116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTCAAGACAGG	3533	False	NA	NA	False	NA	NA	NA	100271206	100271024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100271000_100271200
ES.6329.5	chr11	-	3436	15	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	185.459440529817	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288586	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100286711_100286932_100288461
ES.6329.50	chr11	-	136	1	Intergenic	novelGene_5118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100289944	100289808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100289800_100289900
ES.6329.6	chr11	-	3137	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	191.846647337592	566	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100277630	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267765_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277524
ES.6329.8	chr11	-	3175	14	NNC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	3676	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	145.753946834216	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100284899	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100284815
ES.6329.9	chr11	-	3382	14	NIC	ENSMUSG00000001552.15	novel	3205	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	142.103221088711	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100277612	100261444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100277321
ES.633.1	chr1	-	3171	2	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAATGCCCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	63305132	63301301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63303464_63304123
ES.633.2	chr1	-	3833	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAATGCCCTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	63305134	63301301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63301300_63305100
ES.633.4	chr1	-	3205	2	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63305134	63301325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63303524_63304127
ES.633.5	chr1	-	3223	2	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63305136	63301325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63303536_63304123
ES.6330.1	chr11	+	4297	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	-1706	-7	-1706	7	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGGACAGATGTCTGG	NA	False	NA	20	True	AATAAA	-21	NA	100304816	100315657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ES.6330.2	chr11	+	3462	11	NNC	ENSMUSG00000001555.11	novel	2584	10	NA	NA	-1460	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.86103442849684	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTCCAGAAGTGGACA	NA	False	NA	11	True	AATAAA	-12	NA	100305062	100315648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100305309_100305888_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ES.6330.3	chr11	+	2374	9	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	4580	4	-147	-4	3prime_fragment	FALSE	canonical	3	18	junction_3	6.35904867098845	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACCTCCAGAAGTGGA	NA	False	NA	9	True	AATAAA	-10	NA	100311102	100315646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ES.6330.4	chr11	+	2680	8	NIC	ENSMUSG00000001555.11	novel	2584	10	NA	NA	-147	-2	intron_retention	FALSE	canonical	3	22	junction_3	5.80640040940045	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTCCAGAAGTGGACA	NA	False	NA	11	True	AATAAA	-12	NA	100311102	100315648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100311372_100311716_100311907_100312019_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ES.6330.5	chr11	+	2008	7	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5415	-7	688	7	3prime_fragment	FALSE	canonical	3	18	junction_1	6.90410505906933	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGGACAGATGTCTGG	NA	False	NA	20	True	AATAAA	-21	NA	100311937	100315657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ES.6330.6	chr11	+	1801	4	NIC	ENSMUSG00000001555.11	novel	1467	8	NA	NA	-1048	-2	intron_retention	FALSE	canonical	3	27	junction_1	3.55902608401044	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTCCAGAAGTGGACA	NA	False	NA	11	True	AATAAA	-12	NA	100312815	100315648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100312916_100313451_100314054_100314261_100314426_100314713
ES.6331.1	chr11	+	1258	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-788	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.2565175405668	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAATTAATTCTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	100331954	100347804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100332042_100337946_100338565_100347109_100347256_100347397
ES.6331.2	chr11	+	2023	6	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-788	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.9427400463467	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAAGAGTACTGGAAAAT	NA	False	NA	NA	False	AATAAA	-15	NA	100331954	100347847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100332042_100332822_100333051_100336208_100336699_100337946_100338565_100347109_100347260_100347397
ES.6331.4	chr11	+	157	1	Intergenic	novelGene_5121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	100333850	100334007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100333800_100334000
ES.6331.5	chr11	+	5277	1	Genic_Genomic	ENSMUSG00000001558.6	novel	NA	NA	NA	NA	14493	4674	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTAGGGAATGCAATAA	NA	False	NA	NA	False	NA	NA	NA	100347245	100352522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_100347200_100352500
ES.6332.1	chr11	-	4740	6	NIC	ENSMUSG00000006931.16	novel	2178	8	NA	NA	157	334	intron_retention	FALSE	canonical	3	87	junction_4	10.4307238483242	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTCTTTCCTGGAATT	NA	False	NA	NA	False	ATTAAA	-14	NA	100305505	100298947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100299971_100300188_100302024_100302554_100302701_100303526_100304607_100304752_100304906_100305002
ES.6332.2	chr11	-	2402	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	109	-333	109	333	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTTCTTTCCTGGAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	100305553	100298948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ES.6332.3	chr11	-	2062	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	103	13	103	-13	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATAACACCTGAGGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	100305559	100299294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ES.6332.5	chr11	-	1890	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	30	258	30	-258	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTAGCTCTCTCTCTCTC	NA	False	NA	29	True	NA	NA	NA	100305632	100299539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ES.6332.7	chr11	-	1635	8	NNC	ENSMUSG00000006931.16	novel	2178	8	NA	NA	165	-321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.3037964373862	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAAAGGAAAA	NA	False	NA	-34	True	NA	NA	NA	100305497	100299602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100299971_100300245_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ES.6332.8	chr11	-	1496	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	97	585	97	325	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGGCACACACCCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	100305565	100299866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ES.6333.1	chr11	-	177	1	Intergenic	novelGene_5119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	100309245	100309068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100309100_100309200
ES.6334.1	chr11	-	1406	9	FSM	ENSMUSG00000017176.18	ENSMUST00000107399.9	1427	9	29	-8	13	8	multi-exon	FALSE	canonical	1	4	junction_1	186.778612265966	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTCTGTGTCCTTAACT	NA	False	NA	NA	False	AATACA	-23	NA	100331886	100313138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100313772_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.10	chr11	-	1294	9	NNC	ENSMUSG00000017176.18	novel	1344	8	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	228.661560772684	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCACGCGTCTTTAAT	NA	False	NA	-5	True	ATTAAA	-16	NA	100331888	100320181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753_100331778_100331869
ES.6334.12	chr11	-	1329	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	192.879998645663	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGATGCACGCGTCTT	NA	False	NA	-9	True	ATTAAA	-12	NA	100331899	100320185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100331010_100331081_100331654_100331754_100331869
ES.6334.13	chr11	-	6225	7	NNC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	11	-2	intron_retention	FALSE	canonical	0	0	junction_2	206.499730965657	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGGATGCACGCGTCT	NA	False	NA	-10	True	ATTAAA	-11	NA	100331888	100320186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100322104_100323743_100323842_100325520_100325611_100326980_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.15	chr11	-	1132	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	27	240	11	-234	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGAGCCTTCTACAGA	NA	False	NA	NA	False	AGTAAA	-25	NA	100331888	100320418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.16	chr11	-	765	4	ISM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	-15	10199	-15	1	5prime_fragment	FALSE	canonical	3	274	junction_3	111.761651145045	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGTTTATTTTTATTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	100331930	100330377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.2	chr11	-	168	1	Intergenic	novelGene_5120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAGGAAAAAAAAA	6861	False	NA	NA	False	NA	NA	NA	100316185	100316017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100316000_100316200
ES.6334.3	chr11	-	5283	7	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	-2	1	intron_retention	FALSE	canonical	3	274	junction_6	103.633033129189	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCGTCTTTAATCCCA	NA	False	NA	-1	True	ATTAAA	-20	NA	100331901	100320177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100331081_100331654_100331754_100331869
ES.6334.4	chr11	-	1491	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	-92	0	-92	0	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	False	NA	-2	True	ATTAAA	-19	NA	100332007	100320178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.5	chr11	-	1563	10	NNC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	220.69737953436	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331898	100320179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100328421_100328604_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.6	chr11	-	1390	9	NNC	ENSMUSG00000017176.18	novel	1344	8	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	265.465599230861	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331853	100320179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100320776_100321902_100322104_100323743_100323842_100325520_100325611_100326980_100327067_100327539_100327642_100330865_100330913_100331010_100331081_100331753
ES.6334.7	chr11	-	5170	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	11	-1	intron_retention	FALSE	canonical	3	274	junction_7	97.3946317089104	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACGCGTCTTTAATCC	NA	False	NA	-3	True	ATTAAA	-18	NA	100331888	100320179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100330913_100331010_100331081_100331654_100331754_100331869
ES.6334.9	chr11	-	3026	8	NIC	ENSMUSG00000017176.18	novel	1399	9	NA	NA	-5	1	intron_retention	FALSE	canonical	3	274	junction_7	98.4668181963563	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCACGCGTCTTTAATC	NA	False	NA	-4	True	ATTAAA	-17	NA	100331904	100320180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100320776_100321902_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ES.6335.1	chr11	-	174	1	Intergenic	novelGene_5122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGTGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	100341584	100341410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100341400_100341600
ES.6336.1	chr11	-	7949	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	-57	-5499	-57	5499	multi-exon	FALSE	canonical	3	21	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTGTGTGTTGAATGTA	7637	False	NA	2	True	AATAAA	-22	NA	100363624	100347940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100355272_100363006
ES.6336.2	chr11	-	3878	3	NNC	ENSMUSG00000048732.6	novel	2393	2	NA	NA	-65	5491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTTTGTACTGTGTGT	7629	False	NA	-6	True	AATAAA	-14	NA	100363632	100347948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100349543_100353613_100355272_100363006
ES.6336.3	chr11	-	5465	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	7	-3079	7	3079	multi-exon	FALSE	canonical	3	21	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCACTGTAAATCCAATTT	7701	False	NA	NA	False	AATAAA	-29	NA	100363560	100350360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100355272_100363006
ES.6336.4	chr11	-	3747	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	4	-1358	4	1358	multi-exon	FALSE	canonical	3	21	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGGATTTTTTTGTTC	7698	False	NA	NA	False	AATAAA	-12	NA	100363563	100352081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100355272_100363006
ES.6336.5	chr11	-	2391	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	4	-2	4	2	multi-exon	FALSE	canonical	3	21	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTAGTTACTTGGCCTT	7698	False	NA	-6	True	ATTAAA	-18	NA	100363563	100353437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100355272_100363006
ES.6337.1	chr11	+	2122	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	117	1	14	-1	multi-exon	FALSE	canonical	2	3	junction_1	9.12538915733062	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	100436549	100462788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
ES.6337.2	chr11	+	2261	11	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	3872	1	-68	-1	3prime_fragment	FALSE	canonical	3	16	junction_2	6.19354502688081	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	100440304	100462788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
ES.6337.3	chr11	+	1831	9	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	5170	3	1230	-3	3prime_fragment	FALSE	canonical	3	25	junction_3	3.47985272676876	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATCTTGAGTGACACTG	NA	False	NA	NA	False	ATTAAA	-19	NA	100441602	100462786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
ES.6337.4	chr11	+	3411	5	NIC	ENSMUSG00000006784.15	novel	2240	12	NA	NA	3606	-1	intron_retention	FALSE	canonical	3	29	junction_1	1.87082869338697	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGAGTGACACTGTG	2028	False	NA	NA	False	ATTAAA	-21	NA	100443978	100462788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681
ES.6337.5	chr11	+	5619	5	ISM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	8034	2	4094	-2	intron_retention	FALSE	canonical	3	25	junction_1	3.20156211871642	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCTTGAGTGACACTGT	2516	False	NA	NA	False	ATTAAA	-20	NA	100444466	100462787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734
ES.6337.6	chr11	+	2873	1	NIC	ENSMUSG00000006784.15	novel	2240	12	NA	NA	4425	6516	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTCTTCAGACACT	2847	False	NA	NA	False	NA	NA	NA	100444797	100447670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100444800_100447700
ES.6338.1	chr11	+	2401	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	-43	-1	-43	1	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTATCACTCTTGG	NA	False	NA	20	True	AATAAA	-16	NA	100465686	100472555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ES.6338.2	chr11	+	1499	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	70	788	70	-788	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCCACCCTTTCTT	NA	False	NA	NA	False	TATAAA	-14	NA	100465799	100471766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ES.6338.3	chr11	+	4293	3	NIC	ENSMUSG00000006782.17	novel	2357	4	NA	NA	70	-1	intron_retention	FALSE	canonical	3	85	junction_2	4	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGCTATCACTCTT	NA	False	NA	18	True	AATAAA	-14	NA	100465799	100472553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100465895_100467061_100469879_100471172
ES.6339.1	chr11	+	4367	1	Intergenic	novelGene_5126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGGGTTGGAGAGATAGC	NA	False	NA	NA	False	AATAAA	-10	NA	100497892	100502259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100497900_100502300
ES.6339.2	chr11	+	1656	1	Intergenic	novelGene_5127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATTATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100500750	100502406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100500800_100502400
ES.634.1	chr1	-	7578	2	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-14	NA	63348388	63333217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63334204_63341796
ES.634.2	chr1	-	2164	2	Antisense	novelGene_ENSMUSG00000027520.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTGCCTCTTTTTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	63362843	63344988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_63346409_63362099
ES.6340.1	chr11	+	5163	4	NNC	ENSMUSG00000017837.13	novel	1727	4	NA	NA	-535	3	intron_retention	FALSE	canonical	1	1	junction_1	160.70054967755	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCCCCTACCCCTTTT	NA	False	NA	20	True	AATAAA	-27	NA	100509534	100518436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100512731_100515017_100515126_100515768_100516011_100516819
ES.6340.10	chr11	+	2699	3	NIC	ENSMUSG00000017837.13	novel	2097	4	NA	NA	-3	0	intron_retention	FALSE	canonical	3	328	junction_1	2	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	17	True	AATAAA	-24	NA	100513742	100518433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100513835_100515017_100516011_100516819
ES.6340.11	chr11	+	1961	3	ISM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	1314	5	1179	-5	3prime_fragment	FALSE	canonical	3	332	junction_2	9.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTCCCGTCCCCTA	NA	False	NA	12	True	AATAAA	-19	NA	100515015	100518428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100515126_100515768_100516011_100516819
ES.6340.2	chr11	+	1893	1	NIC	ENSMUSG00000017837.13	novel	1727	4	NA	NA	15	-3727	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCAGTTTCATCTTTGC	NA	False	NA	NA	False	AATAAA	-30	NA	100510084	100511977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100510100_100512000
ES.6340.3	chr11	+	3020	4	FSM	ENSMUSG00000017837.13	ENSMUST00000051947.10	831	4	-1003	-1186	37	-5	multi-exon	FALSE	canonical	0	0	junction_1	161.171406341889	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTCCCGTCCCCTA	NA	False	NA	12	True	AATAAA	-19	NA	100510106	100518428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100511168_100515017_100515126_100515768_100516011_100516819
ES.6340.4	chr11	+	2105	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	-4	-4	-4	4	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCCCCTACCCCTTTTC	NA	False	NA	21	True	AATAAA	-28	NA	100513697	100518437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ES.6340.6	chr11	+	1988	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	20	3	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCCCCTACCCCTTTT	NA	False	NA	20	True	AATAAA	-27	NA	100513721	100518436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
ES.6340.7	chr11	+	778	5	NIC	ENSMUSG00000017837.13	novel	988	6	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTGGCCCTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	100513735	100517240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
ES.6340.8	chr11	+	869	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	37	1191	-7	0	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGCCCTCCCTTGAC	NA	False	NA	NA	False	NA	NA	NA	100513738	100517242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ES.6340.9	chr11	+	2238	4	NNC	ENSMUSG00000017837.13	novel	2097	4	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	3	junction_3	158.905282759539	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTCCCGTCCCCTA	NA	False	NA	12	True	AATAAA	-19	NA	100513740	100518428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100513835_100515017_100515126_100515768_100516011_100516634
ES.6341.1	chr11	+	185	1	Intergenic	novelGene_5128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACTAGAAG	4317	False	NA	NA	False	NA	NA	NA	100550026	100550211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100550000_100550200
ES.6342.1	chr11	-	4389	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	52	-15	52	15	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCGTGTCCTCTGCTTT	NA	False	NA	1	True	AATAAA	-33	NA	100418774	100367163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.10	chr11	-	4350	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	922.045050556155	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418732	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384447_100384693_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.101	chr11	-	4133	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	780.729058525292	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418696	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372275_100372578_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.103	chr11	-	4254	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	1028.10928921123	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418694	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395676_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414439_100418620
ES.6342.107	chr11	-	4268	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1218.99604962388	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418694	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369149_100369234_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407593_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.111	chr11	-	4187	27	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	800.475244379178	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418694	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410644_100412828_100412931_100414265_100414448_100418620
ES.6342.113	chr11	-	6144	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_15	1181.33781986477	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418694	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393305_100395120_100395680_100395836_100403701_100403820_100404370_100404533_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.116	chr11	-	4276	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	917.541398582236	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418690	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414439_100418620
ES.6342.117	chr11	-	4280	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	787.344650995549	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418694	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375575_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.118	chr11	-	8279	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	838.473929596052	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418690	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100393583_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.12	chr11	-	2402	13	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	1050.92835943592	4343	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	1721	False	NA	-14	True	AATAAA	-18	NA	100385053	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100384973
ES.6342.123	chr11	-	4249	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	780.806591150866	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418695	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409925_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.124	chr11	-	3609	24	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	832.844076162212	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCGTGATGCTCTTTT	NA	False	NA	-20	True	AATAAA	-12	NA	100418694	100367184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407676_100414400_100414448_100418620
ES.6342.126	chr11	-	3599	23	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	818.461745043208	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCGTGATGCTCTTTT	NA	False	NA	-20	True	AATAAA	-12	NA	100418694	100367184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100405878_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.13	chr11	-	4308	28	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-6562	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	780.70311421034	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100425388	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100425270
ES.6342.130	chr11	-	4268	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_1	914.307421617308	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGCGTGATGCTCTTT	NA	False	NA	-21	True	AATAAA	-11	NA	100418692	100367185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368148_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.134	chr11	-	4291	28	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	933.825259838375	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGCGTGATGCTCTTT	NA	False	NA	-21	True	AATAAA	-11	NA	100418695	100367185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100410357_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.137	chr11	-	4262	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	785.707074985173	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGCGTGATGCTCTTT	NA	False	NA	-21	True	AATAAA	-11	NA	100418693	100367185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386679_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.139	chr11	-	4253	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1036.41659482309	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418693	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372198_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384901_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.141	chr11	-	4277	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	780.729058525292	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418693	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372369_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.142	chr11	-	4319	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-38	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	923.710973741356	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418733	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411174_100412807_100412931_100414265_100414448_100418620
ES.6342.145	chr11	-	4423	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-21930	-3	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_28	915.534849814298	4358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	1075	False	NA	-22	True	AATAAA	-10	NA	100440756	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100440545
ES.6342.146	chr11	-	5876	8	NIC	ENSMUSG00000020917.18	novel	4162	27	NA	NA	5426	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	1343.62962583763	4342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	7175	False	NA	-22	True	AATAAA	-10	NA	100379599	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100375425
ES.6342.148	chr11	-	4250	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	787.456604504688	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409983_100410435_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.15	chr11	-	4250	28	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1024.1283971929	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418688	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374530_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407721_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.150	chr11	-	4307	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	787.289021099294	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409993_100410387_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.152	chr11	-	3100	13	NNC	ENSMUSG00000020917.18	novel	4162	27	NA	NA	-1711	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1057.21062497288	4344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	38	False	NA	-22	True	AATAAA	-10	NA	100386736	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100383627_100384445_100384709_100384907_100386685
ES.6342.153	chr11	-	5052	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-3	intron_retention	FALSE	canonical	3	2198	junction_14	370.217433712747	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418693	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.155	chr11	-	4174	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	801.725251378691	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.156	chr11	-	4245	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1006.59022820468	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418693	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368912_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389585_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.157	chr11	-	4249	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	783.50023438666	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418693	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406733_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.164	chr11	-	4464	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	786.903934714483	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374837_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.166	chr11	-	4250	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	787.526977785994	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407607_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.167	chr11	-	4241	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	779.427173501711	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414281_100414448_100418620
ES.6342.168	chr11	-	4280	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	786.542919401323	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410656_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.169	chr11	-	4312	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	1197.62042128104	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100387376_100387437_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406843_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.17	chr11	-	4355	30	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	1096.04783694869	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418695	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100388590_100388651_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.172	chr11	-	4265	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	779.427173501711	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412939_100414265_100414448_100418620
ES.6342.175	chr11	-	4261	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	1034.15617709718	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418691	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395126_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412805_100412931_100414265_100414448_100418620
ES.6342.178	chr11	-	4323	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-13156	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1194.74355944676	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	9849	False	NA	-22	True	AATAAA	-10	NA	100431982	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375548_100383324_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395024_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100431845
ES.6342.179	chr11	-	4240	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	786.986806240206	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418694	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403717_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.18	chr11	-	4319	28	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_27	778.18110353823	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418731	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414466_100418620
ES.6342.182	chr11	-	4250	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	784.363107383924	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373115_100374530_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.185	chr11	-	4340	30	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	1095.87573503338	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	False	NA	-22	True	AATAAA	-10	NA	100418695	100367186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100416369_100416423_100418620
ES.6342.188	chr11	-	4247	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	1033.62583010147	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAATGGCGTGATGCTC	NA	False	NA	-24	True	AATAAA	-8	NA	100418692	100367188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386679_100386791_100389021_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.189	chr11	-	4242	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	787.456604504688	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAACAATGGCGTGATGC	NA	False	NA	-26	True	AATAAA	-6	NA	100418696	100367190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410452_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.192	chr11	-	4161	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	61	171	61	-169	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTCCTCTGTGTTC	NA	False	NA	2	True	AAAAAG	-16	NA	100418765	100367352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.193	chr11	-	4104	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-176	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	787.344650995549	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCAGTGTCCTC	NA	False	NA	-5	True	AAAAAG	-9	NA	100418694	100367359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375575_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.194	chr11	-	4178	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	67	181	-64	-176	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTCAGTGTCCTC	NA	False	NA	-5	True	AAAAAG	-9	NA	100418759	100367359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.196	chr11	-	4071	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	4	-181	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	783.50023438666	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTCTTGTGTCAGTG	NA	False	NA	-10	True	AAAAAG	-4	NA	100418691	100367364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405927_100406733_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.198	chr11	-	4259	30	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	633	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	1098.57954010864	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGTCTTGTGTCAGTG	NA	False	NA	-10	True	AAAAAG	-4	NA	100418062	100367364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100417056_100417152_100417932
ES.6342.2	chr11	-	4398	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	12	-17	12	14	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCCGTGTCCTCTGCTT	NA	False	NA	0	True	AATAAA	-32	NA	100418814	100367164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.20	chr11	-	3746	25	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	984.91069815153	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418733	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406737_100412819_100412931_100414265_100414448_100418620
ES.6342.200	chr11	-	4033	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-185	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	740.547261769011	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAAATGTCTTGTGTC	NA	False	NA	-14	True	TTTAAA	-21	NA	100418695	100367368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389533_100395014_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.201	chr11	-	3982	15	ISM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	23397	190	-1103	-190	3prime_fragment	FALSE	canonical	3	3333	junction_12	221.97408609556	4347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTGTGAAATGTCTT	9885	False	NA	-19	True	TTTAAA	-16	NA	100391027	100367373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446
ES.6342.202	chr11	-	4077	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	786.903934714483	4356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGCAAAGCAAAAAGCTG	NA	False	NA	-30	True	TTTAAA	-5	NA	100418695	100367384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374647_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.203	chr11	-	3914	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	132	380	1	-375	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	4354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTATGTGTTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	100418694	100367558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.204	chr11	-	2869	19	ISM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	131	15613	0	6279	5prime_fragment	FALSE	canonical	3	2198	junction_6	418.249128311505	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCCTCTGTTGGGAAGA	NA	False	NA	NA	False	NA	NA	NA	100418695	100382794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.205	chr11	-	3003	15	ISM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	132	20663	1	1229	5prime_fragment	FALSE	canonical	3	2198	junction_2	459.175258879817	4198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTTGCCATTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	100418694	100387844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.206	chr11	-	3776	15	NNC	ENSMUSG00000020917.18	novel	1741	15	NA	NA	2	43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1137.71664678308	4168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTGTCTCAAGAGGAT	NA	False	NA	NA	False	NA	NA	NA	100418693	100391361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100393583_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.207	chr11	-	2184	15	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	-1550	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1137.71664678308	4167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGTTGTTGGAAATT	NA	False	NA	NA	False	NA	NA	NA	100418694	100392954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100393583_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.208	chr11	-	131	1	Intergenic	novelGene_5123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	100401577	100401446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100401400_100401600
ES.6342.209	chr11	-	2535	6	ISM	ENSMUSG00000020917.18	ENSMUST00000107385.2	1741	15	0	16689	0	-16689	5prime_fragment	FALSE	canonical	3	3619	junction_1	203.815014167259	4061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCCCGGCTCTGTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	100418695	100408093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.210	chr11	-	640	3	Antisense	novelGene_ENSMUSG00000006784.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATCGATACTTTCCC	966	False	NA	NA	False	AGTAAA	-27	NA	100440865	100433457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_100433656_100434009_100434132_100440545
ES.6342.24	chr11	-	4307	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1122.21491254972	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418694	100367178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384702_100384907_100386679_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.26	chr11	-	4255	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	787.194269261597	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418694	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405795_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.27	chr11	-	4330	30	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	1104.78479511605	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418693	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412021_100412060_100412807_100412931_100414265_100414448_100418620
ES.6342.29	chr11	-	4340	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-6565	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	917.541398582236	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100425391	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100425270
ES.6342.3	chr11	-	4225	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	24	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	1026.87660324843	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCTTTTATGTTCCGTG	NA	False	NA	-10	True	AATAAA	-22	NA	100418671	100367174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409993_100410452_100410632_100411116_100411180_100412807_100412925_100414265_100414448_100418620
ES.6342.30	chr11	-	4140	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	793.066306912457	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418694	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100414265_100414448_100418620
ES.6342.31	chr11	-	4257	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	1027.50450154044	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418694	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384897_100386679_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412929_100414265_100414448_100418620
ES.6342.33	chr11	-	4291	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	923.67471524982	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418694	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410626_100411112_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.35	chr11	-	4323	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-21853	-1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_27	778.18110353823	4358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	1152	False	NA	-15	True	AATAAA	-17	NA	100440679	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100440545
ES.6342.36	chr11	-	4263	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	786.542919401323	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418696	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410626_100411112_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.39	chr11	-	4292	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	925.057328615092	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418696	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395113_100395676_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.4	chr11	-	9705	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	1	intron_retention	FALSE	canonical	3	3333	junction_12	217.537563919375	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCTCTTTTATGTTCC	NA	False	NA	-13	True	AATAAA	-19	NA	100418694	100367177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.40	chr11	-	4285	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	740.547261769011	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418691	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395003_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.41	chr11	-	4241	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1031.66321425857	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418694	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373104_100374530_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410444_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.42	chr11	-	4341	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	1007.14498669988	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGATGCTCTTTTATGTT	NA	False	NA	-15	True	AATAAA	-17	NA	100418691	100367179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100416341_100416423_100418620
ES.6342.43	chr11	-	5089	28	NIC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	1	intron_retention	FALSE	canonical	3	1365	junction_15	653.928489313474	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	False	NA	-16	True	AATAAA	-16	NA	100418694	100367180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.44	chr11	-	4319	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	1	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_8	924.005496825244	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	False	NA	-16	True	AATAAA	-16	NA	100418694	100367180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374656_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.45	chr11	-	4498	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	1	intron_retention	FALSE	canonical	3	2198	junction_14	370.228573648175	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	False	NA	-16	True	AATAAA	-16	NA	100418694	100367180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.46	chr11	-	4342	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	832.953580394392	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	False	NA	-16	True	AATAAA	-16	NA	100418696	100367180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394064_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.47	chr11	-	3612	23	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	818.461745043208	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	False	NA	-16	True	AATAAA	-16	NA	100418694	100367180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389176_100405865_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.48	chr11	-	4285	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	921.233995928886	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374540_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.49	chr11	-	4229	28	NIC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_25	936.340610765654	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418695	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100412807_100412931_100414265_100414448_100418620
ES.6342.55	chr11	-	4249	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	787.414098783457	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418695	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370111_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.59	chr11	-	4303	27	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	795.545720925479	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418733	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100410357_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.61	chr11	-	4282	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	925.491432473382	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372211_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.62	chr11	-	4199	27	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_24	797.577111332008	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418695	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100412807_100412931_100414265_100414448_100418620
ES.6342.64	chr11	-	4292	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	780.70311421034	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414479_100418620
ES.6342.7	chr11	-	4289	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	925.191011717724	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCTCTTTTATGTTCC	NA	False	NA	-13	True	AATAAA	-19	NA	100418694	100367177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375548_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.71	chr11	-	4106	27	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	793.554658207064	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372343_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.72	chr11	-	4314	29	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	1007.14498669988	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100416369_100416423_100418620
ES.6342.73	chr11	-	4267	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	1007.32836699731	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418688	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395009_100395113_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.74	chr11	-	4210	27	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	800.475244379178	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418689	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410673_100412831_100412931_100414265_100414448_100418620
ES.6342.75	chr11	-	4311	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_28	915.534849814298	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418696	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414466_100418620
ES.6342.76	chr11	-	4354	30	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	1259.81072979667	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418703	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100383627_100383678_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411112_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.77	chr11	-	4564	30	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-21927	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	1172.45571730316	4358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	1078	False	NA	-17	True	AATAAA	-15	NA	100440753	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100434009_100434095_100437721_100437806_100440545
ES.6342.8	chr11	-	4383	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	1005.94247297178	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCTCTTTTATGTTCC	NA	False	NA	-13	True	AATAAA	-19	NA	100418695	100367177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100414860_100414978_100418620
ES.6342.83	chr11	-	4229	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	786.572124122885	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412839_100412931_100414265_100414448_100418620
ES.6342.84	chr11	-	4209	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	782.554711533456	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418694	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368113_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.85	chr11	-	8726	28	NIC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-37	0	intron_retention	FALSE	canonical	3	1365	junction_15	499.266869927704	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418732	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.86	chr11	-	4323	29	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	1006.18192950137	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418696	100367181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100388590_100388651_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.91	chr11	-	4171	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	787.456604504688	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418695	100367182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409952_100410487_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.92	chr11	-	4318	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	786.736418404472	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418725	100367182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374656_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.93	chr11	-	4281	29	NNC	ENSMUSG00000020917.18	novel	4426	29	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	924.553317410464	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTGATGCTCTTTTAT	NA	False	NA	-18	True	AATAAA	-14	NA	100418695	100367182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405797_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ES.6342.96	chr11	-	4249	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	786.572124122885	4357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418693	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411171_100412807_100412931_100414265_100414448_100418620
ES.6342.98	chr11	-	4142	28	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	779.427173501711	4357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	NA	False	NA	-19	True	AATAAA	-13	NA	100418680	100367183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412943_100414380_100414448_100418620
ES.6343.1	chr11	-	241	1	Intergenic	novelGene_5124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGTGTCTGAAGAC	NA	False	NA	NA	False	GGGGCT	-24	NA	100447938	100447697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100447700_100447900
ES.6344.1	chr11	-	1856	15	NNC	ENSMUSG00000014195.17	novel	1900	15	NA	NA	-10	19612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	711.382274024254	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACAGAAGCAACTGAAAT	5881	False	NA	NA	False	AAGAAA	-1	NA	100510495	100454031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100454060_100473646_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.11	chr11	-	1840	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	727.332216972515	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	6038	False	NA	-21	True	AATAAA	-15	NA	100510338	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510187
ES.6344.12	chr11	-	1867	15	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	939.864083204566	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5932	False	NA	-21	True	AATAAA	-15	NA	100510444	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100489828_100489916_100490010_100490136_100492553_100492643_100510353
ES.6344.13	chr11	-	1775	15	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	711.382274024254	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5884	False	NA	-21	True	AATAAA	-15	NA	100510492	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473718_100473770_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.14	chr11	-	1801	14	FSM	ENSMUSG00000014195.17	ENSMUST00000239499.2	1771	14	-30	0	-2	0	multi-exon	FALSE	canonical	3	66	junction_11	720.895014063612	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5889	False	NA	-21	True	AATAAA	-15	NA	100510487	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490032_100490136_100492553_100492643_100510353
ES.6344.15	chr11	-	1931	15	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	930.918859766729	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5937	False	NA	-21	True	AATAAA	-15	NA	100510439	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100501307_100501464_100510353
ES.6344.16	chr11	-	4214	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-19	0	intron_retention	FALSE	canonical	3	2240	junction_1	255.007298370502	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5872	False	NA	-21	True	AATAAA	-15	NA	100510504	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.17	chr11	-	4232	14	NIC	ENSMUSG00000014195.17	novel	1771	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	42	junction_6	1094.73751953899	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5932	False	NA	-21	True	AATAAA	-15	NA	100510444	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100489555_100490032_100490136_100492553_100492643_100510353
ES.6344.18	chr11	-	5427	11	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	2240	junction_1	262.556831943105	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5916	False	NA	-21	True	AATAAA	-15	NA	100510460	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.19	chr11	-	1390	12	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	789.619628064547	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5921	False	NA	-21	True	AATAAA	-15	NA	100510455	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473778_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.2	chr11	-	1910	16	NNC	ENSMUSG00000014195.17	novel	1900	15	NA	NA	-3	19612	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1040.67443943286	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACAGAAGCAACTGAAAT	5927	False	NA	NA	False	AAGAAA	-1	NA	100510449	100454031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100454060_100473646_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.20	chr11	-	4332	11	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	3	0	intron_retention	FALSE	canonical	3	2240	junction_1	248.430352412905	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5926	False	NA	-21	True	AATAAA	-15	NA	100510450	100473643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.22	chr11	-	6499	14	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	42	junction_5	715.257565227649	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTCCTTGGCTTTGG	5935	False	NA	-22	True	AATAAA	-14	NA	100510441	100473644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.23	chr11	-	3499	11	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	2298	junction_5	239.551748062919	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTCCTTGGCTTTGG	5926	False	NA	-22	True	AATAAA	-14	NA	100510450	100473644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.24	chr11	-	2242	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	0	intron_retention	FALSE	canonical	3	2298	junction_7	236.358293815884	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGTCCTTGGCTTTG	5925	False	NA	-23	True	AATAAA	-13	NA	100510451	100473645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.25	chr11	-	1794	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	727.826601691761	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGTCCTTGGCTTTG	5934	False	NA	-23	True	AATAAA	-13	NA	100510442	100473645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475208_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.26	chr11	-	7591	8	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2441	junction_5	217.54520993887	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGGTCCTTGGCTTTG	5952	False	NA	-23	True	AATAAA	-13	NA	100510424	100473645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100483800_100486991_100490136_100492553_100492643_100510353
ES.6344.28	chr11	-	3025	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	1	-2	intron_retention	FALSE	canonical	3	2240	junction_1	256.419175157455	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	5931	False	NA	-34	True	AATAAA	-2	NA	100510445	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.29	chr11	-	5345	5	NIC	ENSMUSG00000014195.17	novel	2248	10	NA	NA	780	-2	intron_retention	FALSE	canonical	3	2240	junction_1	254.839655469866	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	9450	False	NA	-34	True	AATAAA	-2	NA	100484771	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100475190_100475377_100475525_100475807_100475882_100480723
ES.6344.3	chr11	-	2184	15	FSM	ENSMUSG00000014195.17	ENSMUST00000239410.2	1900	15	-27	-257	-27	20	multi-exon	FALSE	canonical	1	2	junction_14	710.897567896259	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCTGTACCTGAGGT	5335	False	NA	-1	True	AATAAA	-35	NA	100511041	100473623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353_100510639_100510851
ES.6344.30	chr11	-	7839	5	NIC	ENSMUSG00000014195.17	novel	1120	9	NA	NA	123	-2	intron_retention	FALSE	canonical	3	42	junction_4	1135.32352217331	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	NA	False	NA	-34	True	AATAAA	-2	NA	100482639	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100480605_100480723
ES.6344.31	chr11	-	3416	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2240	junction_1	239.024187026065	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	5932	False	NA	-34	True	AATAAA	-2	NA	100510444	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.32	chr11	-	5093	11	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	2298	junction_7	247.827036458898	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	5893	False	NA	-34	True	AATAAA	-2	NA	100510483	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100490136_100492553_100492643_100510353
ES.6344.33	chr11	-	4605	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	42	junction_6	982.786270847668	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGACCGTTCTTTGGT	5928	False	NA	-34	True	AATAAA	-2	NA	100510448	100473656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.34	chr11	-	8875	9	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	2	intron_retention	FALSE	canonical	3	2298	junction_3	246.636752127496	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTTTTGACCGTTC	5928	False	NA	30	True	ATTAAA	-12	NA	100510448	100473662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100475190_100475377_100475525_100475807_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.35	chr11	-	4587	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-1	1	intron_retention	FALSE	canonical	3	2240	junction_1	265.172110022688	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5922	False	NA	16	True	NA	NA	NA	100510454	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100490136_100492553_100492643_100510353
ES.6344.36	chr11	-	6259	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	10	1	intron_retention	FALSE	canonical	3	2240	junction_1	247.743302233689	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5901	False	NA	16	True	NA	NA	NA	100510475	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.38	chr11	-	4240	14	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	42	junction_6	945.219807879152	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5913	False	NA	16	True	NA	NA	NA	100510463	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.39	chr11	-	2294	14	FSM	ENSMUSG00000014195.17	ENSMUST00000239418.2	1560	14	30	-764	-1	1	multi-exon	FALSE	canonical	3	42	junction_5	947.272721800568	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5942	False	NA	16	True	NA	NA	NA	100510434	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.4	chr11	-	2159	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	3	20	intron_retention	FALSE	canonical	3	2240	junction_1	248.639785745475	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCTGTACCTGAGGT	5933	False	NA	-1	True	AATAAA	-35	NA	100510443	100473623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.41	chr11	-	4073	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	1	1	intron_retention	TRUE	canonical	0	0	junction_10	738.215559994336	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5924	False	NA	16	True	NA	NA	NA	100510452	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100488642_100488697_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.42	chr11	-	1582	13	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	761.617011510524	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5932	False	NA	16	True	NA	NA	NA	100510444	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.46	chr11	-	1146	9	NIC	ENSMUSG00000014195.17	novel	1771	14	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	1	19	junction_6	924.326570739476	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5884	False	NA	16	True	NA	NA	NA	100510492	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100490032_100490136_100492553_100492643_100510353
ES.6344.47	chr11	-	1732	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_13	723.30620750999	1139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5939	False	NA	16	True	NA	NA	NA	100510437	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492635_100510353
ES.6344.48	chr11	-	1757	14	NNC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1103.84881800804	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5924	False	NA	16	True	NA	NA	NA	100510452	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487079_100490006_100490136_100492553_100492643_100510353
ES.6344.49	chr11	-	3853	11	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	2	1	intron_retention	FALSE	canonical	3	2433	junction_7	210.664211483584	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5932	False	NA	16	True	NA	NA	NA	100510444	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.5	chr11	-	3039	12	NIC	ENSMUSG00000014195.17	novel	1771	14	NA	NA	-3	19	intron_retention	FALSE	canonical	3	66	junction_9	776.267856557237	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCTCTGTACCTGAGG	5927	False	NA	-2	True	AATAAA	-34	NA	100510449	100473624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490032_100490136_100492553_100492643_100510353
ES.6344.50	chr11	-	4397	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	1	intron_retention	FALSE	canonical	3	42	junction_6	1013.66224182213	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAATAAAA	5928	False	NA	16	True	NA	NA	NA	100510448	100473676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.51	chr11	-	5468	5	NIC	ENSMUSG00000014195.17	novel	946	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2441	junction_1	252.991477129171	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGCTGAGAATGACCA	5929	False	NA	NA	False	NA	NA	NA	100510447	100481202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.52	chr11	-	1808	7	NIC	ENSMUSG00000014195.17	novel	946	9	NA	NA	3	0	intron_retention	FALSE	canonical	3	2298	junction_1	270.237960981716	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGCTGAGAATGACCA	5926	False	NA	NA	False	NA	NA	NA	100510450	100481202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.53	chr11	-	5194	1	NIC	ENSMUSG00000014195.17	novel	1771	14	NA	NA	609	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1085	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGCTGAGAATGACCA	7825	False	NA	NA	False	NA	NA	NA	100486396	100481202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100481200_100486400
ES.6344.54	chr11	-	1329	2	NNC	ENSMUSG00000014195.17	novel	1322	3	NA	NA	5318	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGCTGAGAATGACCA	NA	False	NA	NA	False	NA	NA	NA	100498865	100481202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100481223_100497556
ES.6344.55	chr11	-	1133	5	FSM	ENSMUSG00000014195.17	ENSMUST00000154972.9	1049	5	-81	-3	-42	3	multi-exon	FALSE	canonical	3	33	junction_1	1222.31570696772	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTTTTGTTTTGTTT	5849	False	NA	NA	False	NA	NA	NA	100510527	100488249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100488881_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.56	chr11	-	5368	1	Intergenic	novelGene_5125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1030	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACCAAACAAAACAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	100502896	100497528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100497500_100502900
ES.6344.6	chr11	-	1979	15	NIC	ENSMUSG00000014195.17	novel	1900	15	NA	NA	-40	18	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	912.841169097889	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTCTGTACCTGAG	5851	False	NA	-3	True	AATAAA	-33	NA	100510525	100473625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.7	chr11	-	4633	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-2	18	intron_retention	FALSE	canonical	3	2298	junction_7	238.99337796421	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGCTCTGTACCTGAG	5928	False	NA	-3	True	AATAAA	-33	NA	100510448	100473625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6344.8	chr11	-	4525	12	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	-1	8	intron_retention	FALSE	canonical	3	2240	junction_1	252.900039051136	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTTGGCAGCTGCTC	5929	False	NA	-13	True	AATAAA	-23	NA	100510447	100473635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100482392_100483680_100483800_100486991_100489555_100490010_100490136_100492553_100492643_100510353
ES.6345.1	chr11	-	2748	8	NNC	ENSMUSG00000014198.16	novel	2766	8	NA	NA	-15791	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.03015750727543	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGGTGCCCAGACTC	NA	False	NA	NA	False	AATAAA	-17	NA	100564239	100518368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100519895_100520363_100520475_100520716_100520914_100521313_100521626_100523519_100523686_100525472_100525584_100548200_100548366_100564079
ES.6345.2	chr11	-	3129	9	NNC	ENSMUSG00000014198.16	novel	2766	8	NA	NA	-407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	0.968245836551854	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGGTGCCCAGACTC	NA	False	NA	NA	False	AATAAA	-17	NA	100548855	100518368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100519895_100520363_100520475_100520716_100520914_100521313_100521626_100523519_100523686_100525472_100525584_100528569_100528719_100548200_100548453_100548550
ES.6346.1	chr11	-	2229	11	NIC	ENSMUSG00000017830.16	novel	2412	13	NA	NA	71	-4	intron_retention	FALSE	canonical	0	0	junction_2	1.22065556157337	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTAACGGTTTTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	100595008	100585713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100586169_100586940_100587038_100588981_100589144_100589234_100589385_100590031_100590286_100592049_100592242_100592375_100592503_100593027_100593145_100593904_100594096_100594319_100594522_100594726
ES.6347.1	chr11	-	3255	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	-307	-2	-15	2	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTTTTGGGGGGGG	6764	False	NA	1	True	AATAAA	-20	NA	100603306	100595569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.10	chr11	-	3303	19	NNC	ENSMUSG00000020918.15	novel	2946	18	NA	NA	31	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	167.48415255786	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6826	False	NA	-3	True	AATAAA	-16	NA	100603244	100595573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100600409_100600524_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.11	chr11	-	3135	17	NIC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	387	junction_11	51.6042255416163	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6778	False	NA	-3	True	AATAAA	-16	NA	100603292	100595573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.12	chr11	-	3299	16	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	387	junction_11	56.4895270529562	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6776	False	NA	-3	True	AATAAA	-16	NA	100603294	100595573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602305_100602638_100602763_100602906
ES.6347.13	chr11	-	4563	12	NIC	ENSMUSG00000020918.15	novel	3269	16	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	120	junction_6	116.972695832181	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGATTGTTTTTTGGG	6790	False	NA	-4	True	AATAAA	-15	NA	100603280	100595574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100601463_100601547_100601730_100601965_100602305_100602638_100602763_100602906
ES.6347.14	chr11	-	3046	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	131.350557129125	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGATTGTTTTTTGGG	6766	False	NA	-4	True	AATAAA	-15	NA	100603304	100595574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599155_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.17	chr11	-	2650	9	NIC	ENSMUSG00000020918.15	novel	3269	16	NA	NA	2296	-4	intron_retention	FALSE	canonical	3	120	junction_7	137.648045300324	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGATTGTTTTTTGG	9367	False	NA	-5	True	AATAAA	-14	NA	100600703	100595575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596651_100596784_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208
ES.6347.18	chr11	-	3193	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	387	junction_11	55.3114759792215	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGATTGTTTTTTGG	6777	False	NA	-5	True	AATAAA	-14	NA	100603293	100595575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.19	chr11	-	3280	16	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	387	junction_10	56.9262290649535	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6776	False	NA	-6	True	AATAAA	-13	NA	100603294	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.20	chr11	-	3194	19	NNC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	206.705977444077	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6778	False	NA	-6	True	AATAAA	-13	NA	100603292	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599086_100599193_100599227_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.21	chr11	-	4209	15	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	7	-5	intron_retention	FALSE	canonical	3	411	junction_8	49.7859192453252	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6802	False	NA	-6	True	AATAAA	-13	NA	100603268	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.22	chr11	-	3019	17	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	133.668374625414	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6787	False	NA	-6	True	AATAAA	-13	NA	100603283	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596882_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.23	chr11	-	3048	19	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	167.457752180758	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6778	False	NA	-6	True	AATAAA	-13	NA	100603292	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599086_100599193_100599279_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.24	chr11	-	3305	17	NIC	ENSMUSG00000020918.15	novel	2946	18	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	22	junction_11	128.122118870045	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6794	False	NA	-6	True	AATAAA	-13	NA	100603276	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.25	chr11	-	3056	18	NNC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	153.736259126604	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6790	False	NA	-6	True	AATAAA	-13	NA	100603280	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597050_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.26	chr11	-	3081	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	131.136448655932	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6801	False	NA	-6	True	AATAAA	-13	NA	100603269	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599227_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.27	chr11	-	3403	15	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-8	-5	intron_retention	FALSE	canonical	3	387	junction_9	57.467648396684	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGATTGTTTTTTG	6787	False	NA	-6	True	AATAAA	-13	NA	100603283	100595576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.28	chr11	-	3041	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.616110212634	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6802	False	NA	-7	True	AATAAA	-12	NA	100603268	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596285_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.29	chr11	-	3033	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	76	-6	intron_retention	FALSE	canonical	3	387	junction_11	57.0577763652773	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	7147	False	NA	-7	True	AATAAA	-12	NA	100602923	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.3	chr11	-	3060	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	-17	0	-17	0	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6762	False	NA	-1	True	AATAAA	-18	NA	100603308	100595571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.32	chr11	-	3128	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	387	junction_11	56.7152977599519	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6778	False	NA	-7	True	AATAAA	-12	NA	100603292	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.33	chr11	-	3026	18	NNC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	153.562065493004	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6809	False	NA	-7	True	AATAAA	-12	NA	100603261	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597040_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.35	chr11	-	4666	14	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	411	junction_10	53.0012838964733	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6778	False	NA	-7	True	AATAAA	-12	NA	100603292	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100601463_100601547_100602763_100602906
ES.6347.36	chr11	-	3017	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	131.255686975162	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6778	False	NA	-7	True	AATAAA	-12	NA	100603292	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601709_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.37	chr11	-	3193	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	128.556693833545	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6793	False	NA	-7	True	AATAAA	-12	NA	100603277	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601100_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.38	chr11	-	2979	18	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	130.957321556315	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTGTGATTGTTTTTT	6800	False	NA	-7	True	AATAAA	-12	NA	100603270	100595577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596945_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.4	chr11	-	3977	17	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_12	133.40432842959	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6802	False	NA	-1	True	AATAAA	-18	NA	100603268	100595571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100601465_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.5	chr11	-	3122	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	-8	0	intron_retention	FALSE	canonical	3	387	junction_11	56.9428167111533	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6787	False	NA	-1	True	AATAAA	-18	NA	100603283	100595571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6347.8	chr11	-	4041	16	NNC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	13	-2	intron_retention	FALSE	canonical	0	0	junction_5	137.224811491541	611	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGATTGTTTTTTGGGG	6808	False	NA	-3	True	AATAAA	-16	NA	100603262	100595573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597307_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ES.6348.1	chr11	+	191	1	Intergenic	novelGene_5129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTCCTGAAAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	100617801	100617992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100617800_100618000
ES.6349.1	chr11	+	2321	1	Intergenic	novelGene_5130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	1142	False	NA	NA	False	AAGAAA	-25	NA	100625233	100627554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100625200_100627600
ES.635.1	chr1	+	3032	4	NNC	ENSMUSG00000025964.16	novel	3538	6	NA	NA	-44	-44359	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	26.0298973404728	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCATGACCAGTACTT	NA	False	NA	NA	False	AATAAA	-27	NA	63485005	63527649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63525481
ES.635.10	chr1	+	2865	24	FSM	ENSMUSG00000025964.16	ENSMUST00000182642.8	2889	24	3	21	-1	-21	multi-exon	FALSE	canonical	2	25	junction_12	8.88489723439638	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATATACTGGCTTCCTT	NA	False	NA	NA	False	ATTAAA	-34	NA	63485052	63612355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045
ES.635.11	chr1	+	3113	27	NNC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	5	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.3179806940856	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485058	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63622957_63623031_63624523_63624615_63631766
ES.635.12	chr1	+	3596	26	NNC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	-6	561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.1269825146987	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGTCTGTATGGA	NA	False	NA	NA	False	NA	NA	NA	63485062	63632632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63622957_63623031_63631766
ES.635.13	chr1	+	3015	26	NNC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	2	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	15.1269825146987	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485070	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63612277_63612356_63631766
ES.635.14	chr1	+	3605	26	FSM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	17	2804	2	560	multi-exon	FALSE	canonical	2	14	junction_24	11.498591218058	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGCTTGTCTGTATGG	NA	False	NA	NA	False	NA	NA	NA	63485070	63632631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
ES.635.15	chr1	+	2212	19	NNC	ENSMUSG00000025964.16	novel	3496	22	NA	NA	-3	-8948	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_18	13.6055544213057	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGACTTCTTGACTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	63485090	63597121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63596916
ES.635.17	chr1	+	3292	26	NNC	ENSMUSG00000025964.16	novel	2655	25	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	14.9090039908775	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAATCCTTTTTTTTC	NA	False	NA	10	True	ATTAAA	-15	NA	63485096	63632071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63618514_63618879_63631766
ES.635.18	chr1	+	3180	22	FSM	ENSMUSG00000025964.16	ENSMUST00000114101.8	3496	22	52	264	27	-264	multi-exon	FALSE	canonical	2	25	junction_12	9.21868358195068	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTAGCCTGCATTTGT	NA	False	NA	NA	False	NA	NA	NA	63485120	63607989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
ES.635.19	chr1	+	3033	25	NNC	ENSMUSG00000025964.16	novel	2655	25	NA	NA	79	-17	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	12.5918845116827	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485172	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612356_63631766
ES.635.20	chr1	+	3591	26	NNC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	91	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	15.2385826112536	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485184	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63618110_63618879_63631766
ES.635.21	chr1	+	6075	26	NNC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	119	-174	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	15.1269825146987	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTAGTTTTGTGCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	63485212	63635261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63622957_63623031_63631766
ES.635.22	chr1	+	3841	22	FSM	ENSMUSG00000025964.16	ENSMUST00000114101.8	3496	22	163	-508	138	508	multi-exon	FALSE	canonical	2	25	junction_12	9.21868358195068	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCAAGAGTAATTCTGCA	NA	False	NA	NA	False	AATAAA	-11	NA	63485231	63608761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
ES.635.23	chr1	+	2383	25	NNC	ENSMUSG00000025964.16	novel	648	6	NA	NA	-9287	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.049348809912	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63524040	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63524102_63525481_63525575_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
ES.635.25	chr1	+	4239	6	NNC	ENSMUSG00000025964.16	novel	5730	24	NA	NA	9003	-167	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	18.497567407635	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTGTGCTCTGATTGG	7518	False	NA	NA	False	ATTAAA	-24	NA	63603335	63635268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612356_63631766
ES.635.26	chr1	+	5823	1	NIC	ENSMUSG00000025964.16	novel	6426	26	NA	NA	2050	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63626231	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63626200_63632100
ES.635.3	chr1	+	3088	26	FSM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	-28	3366	-24	-2	multi-exon	FALSE	canonical	2	14	junction_24	11.498591218058	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAATCCTTTTTTT	NA	False	NA	8	True	ATTAAA	-13	NA	63485025	63632069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63624523_63624615_63631766
ES.635.4	chr1	+	2973	25	NNC	ENSMUSG00000025964.16	novel	2655	25	NA	NA	-18	-2537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.2105021284637	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGCAAGGAAATGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	63485031	63618801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585576_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63618514
ES.635.5	chr1	+	4971	22	FSM	ENSMUSG00000025964.16	ENSMUST00000114101.8	3496	22	-37	-1438	-18	1438	multi-exon	FALSE	canonical	2	25	junction_12	9.21868358195068	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGGTGGAGTTTCAGTTC	NA	False	NA	NA	False	NA	NA	NA	63485031	63609691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
ES.635.6	chr1	+	3132	26	FSM	ENSMUSG00000025964.16	ENSMUST00000114107.3	6110	26	-330	3308	-10	56	multi-exon	FALSE	canonical	2	8	junction_25	13.3899066464259	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGAACAAATAGCAA	NA	False	NA	66	True	ACTAAA	-25	NA	63485039	63632127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
ES.635.7	chr1	+	2967	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-329	17	-9	-17	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAACAACAACAACTT	NA	False	NA	-7	True	NA	NA	NA	63485040	63632054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
ES.635.9	chr1	+	3534	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	-317	-562	-1	562	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTGTCTGTATGGAA	NA	False	NA	NA	False	NA	NA	NA	63485052	63632633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
ES.6350.1	chr11	-	2006	7	NIC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	68.8301048476125	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGATTGTTGGTGT	NA	False	NA	-12	True	ATTAAA	-15	NA	100628984	100605836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100612326_100612477_100628903
ES.6350.10	chr11	-	1100	6	FSM	ENSMUSG00000019173.12	ENSMUST00000019317.12	1967	6	37	830	-2	-830	multi-exon	FALSE	canonical	1	1	junction_2	59.308009577122	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACTTTTTTAATATAT	NA	False	NA	-5	True	NA	NA	NA	100629004	100606666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100606989_100607583_100607732_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ES.6350.11	chr11	-	176	1	Intergenic	novelGene_5131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100625596	100625420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100625400_100625600
ES.6350.2	chr11	-	1869	7	NIC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	26	-129	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	68.8301048476125	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGGTGGTCATGGTAAC	NA	False	NA	0	True	ATTAAA	-27	NA	100628976	100605965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100612326_100612477_100628903
ES.6350.3	chr11	-	1643	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	14	258	14	-256	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTTGTCTTCCTCGTCCT	NA	False	NA	-2	True	AATATA	-22	NA	100629027	100606092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ES.6350.5	chr11	-	2582	5	NIC	ENSMUSG00000019173.12	novel	1967	6	NA	NA	26	-256	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTTGTCTTCCTCGTCCT	NA	False	NA	-2	True	AATATA	-22	NA	100628976	100606092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
ES.6350.6	chr11	-	1617	6	NNC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	-1	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.1290114918218	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTTGTCTTCCTCGTCCT	NA	False	NA	-2	True	AATATA	-22	NA	100629003	100606092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610989_100628899
ES.6350.7	chr11	-	966	7	NNC	ENSMUSG00000019173.12	novel	1915	6	NA	NA	20	-261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.5099379318426	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCACGCTTGTCTTCCTC	NA	False	NA	-7	True	AATATA	-17	NA	100628982	100606097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100606179_100606805_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ES.6350.8	chr11	-	1079	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	36	800	-3	-798	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCAGGTCCCTTTCTC	NA	False	NA	27	True	AATATA	-14	NA	100629005	100606634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ES.6350.9	chr11	-	2058	5	NIC	ENSMUSG00000019173.12	novel	1967	6	NA	NA	15	-830	intron_retention	FALSE	canonical	3	135	junction_4	8.66025403784439	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACTTTTTTAATATAT	NA	False	NA	-5	True	NA	NA	NA	100629026	100606666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100606989_100607583_100608791_100609256_100609409_100610740_100610995_100628903
ES.6351.1	chr11	-	134	1	Intergenic	novelGene_5132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	100630421	100630287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100630300_100630400
ES.6352.1	chr11	-	4482	16	NIC	ENSMUSG00000035355.16	novel	3948	17	NA	NA	-66	-3	intron_retention	TRUE	canonical	0	0	junction_3	0.85374989832438	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGACTCTGTCTGTT	98	False	NA	NA	False	AATAAA	-16	NA	100650632	100631204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100632825_100634949_100635027_100636061_100636169_100636440_100636794_100636990_100637030_100637570_100637816_100638388_100638639_100640434_100640635_100641057_100641253_100643070_100643279_100645959_100646118_100646495_100646740_100647685_100647814_100647904_100648052_100648392_100648627_100650355
ES.6352.2	chr11	-	4008	17	FSM	ENSMUSG00000035355.16	ENSMUST00000107361.9	3748	17	-266	6	-64	0	multi-exon	FALSE	canonical	0	0	junction_1	0.845484328654293	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGACCTTGACTCTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	100650832	100631207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100631448_100632118_100632825_100634949_100635027_100636061_100636169_100636440_100636794_100636990_100637030_100637570_100637816_100638388_100638639_100640434_100640635_100641057_100641253_100643070_100643279_100645959_100646118_100646495_100646740_100647685_100647814_100647904_100648052_100648392_100648627_100650355
ES.6352.3	chr11	-	4531	7	NIC	ENSMUSG00000035355.16	novel	3948	17	NA	NA	-6	-8668	intron_retention	FALSE	canonical	0	0	junction_1	1.06718737290547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	158	False	NA	NA	False	NA	NA	NA	100650572	100639875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100643279_100645959_100646118_100646495_100646740_100647685_100647814_100647904_100648052_100648392_100648627_100650355
ES.6353.1	chr11	+	695	2	Antisense	novelGene_ENSMUSG00000017747.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCAGGTCTCATCATTT	NA	False	NA	NA	False	NA	NA	NA	100655250	100658087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_100655511_100657652
ES.6354.2	chr11	-	2487	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	-21	-4	-21	4	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGTATTTTATGTTA	NA	False	NA	NA	False	NA	NA	NA	100661804	100656853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
ES.6354.8	chr11	-	176	1	Intergenic	novelGene_5133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	100664098	100663922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100663900_100664100
ES.6355.1	chr11	+	177	1	Intergenic	novelGene_5134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100704049	100704226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100704000_100704200
ES.6356.1	chr11	-	5094	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	-30	-2	-30	2	multi-exon	TRUE	canonical	3	41	junction_6	7.16386680880661	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCCTGTTTCCTTTCC	NA	False	NA	2	True	AATAAA	-23	NA	100741580	100671554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.11	chr11	-	4278	3	ISM	ENSMUSG00000020919.12	ENSMUST00000107358.9	5213	19	36593	2	36593	-2	3prime_fragment	FALSE	canonical	3	65	junction_1	2.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	100676761	100671558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100674049_100674497_100674603_100675078
ES.6356.13	chr11	-	5000	19	NNC	ENSMUSG00000020919.12	novel	5213	19	NA	NA	7903	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.9450634382434	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	9914	False	NA	-2	True	AATAAA	-19	NA	100705451	100671558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100674049_100674497_100674603_100675078_100675296_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100705350
ES.6356.16	chr11	-	4780	18	NIC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	15.5374310845095	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	100741363	100671558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.17	chr11	-	4888	20	NNC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	19.3848614435491	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGAGTCCTGTTTCCT	NA	False	NA	-2	True	AATAAA	-19	NA	100741321	100671558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695825_100698410_100698496_100699221_100699360_100741224
ES.6356.18	chr11	-	4492	17	NNC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	89	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	20.8176607715661	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATATTGAGTCCTGTTTC	NA	False	NA	-4	True	AATAAA	-17	NA	100741275	100671560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689412_100689548_100692232_100692408_100693264_100693355_100741224
ES.6356.2	chr11	-	4900	19	NNC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	15.2857554928651	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741375	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689046_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.20	chr11	-	4067	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	131	864	-55	-864	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTGAATTTATCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100741419	100672420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.22	chr11	-	2832	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	-19	2249	-19	-2249	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGACTTTAGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	100741569	100673805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.23	chr11	-	1218	9	NIC	ENSMUSG00000020919.12	novel	5213	19	NA	NA	25816	-2253	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	21.1586270821148	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTGTGACTTTAGTG	4918	False	NA	NA	False	NA	NA	NA	100687538	100673809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100687244_100687368_100687443
ES.6356.4	chr11	-	5152	19	FSM	ENSMUSG00000020919.12	ENSMUST00000107358.9	5213	19	61	0	61	0	multi-exon	FALSE	canonical	0	0	junction_18	15.2857554928651	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	8024	False	NA	0	True	AATAAA	-21	NA	100713293	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100712877
ES.6356.5	chr11	-	4872	19	NIC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_17	14.8793501782973	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741388	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695825_100699221_100699360_100741224
ES.6356.7	chr11	-	4944	18	NIC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.3316282086872	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741484	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100674049_100674497_100674603_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.8	chr11	-	4973	18	NIC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	41	junction_6	7.30738830742096	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741385	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ES.6356.9	chr11	-	5163	20	NNC	ENSMUSG00000020919.12	novel	5062	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	19.4191269905419	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741552	100671556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100709388_100709488_100741224
ES.6357.1	chr11	+	3688	19	NIC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12.4181269337694	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTGCTTCCTGGTTT	NA	False	NA	13	True	AATAAA	-30	NA	100750282	100775994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100750407_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.10	chr11	+	1752	5	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	1695	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.8400802362146	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTGCTTCCTGGTTT	NA	False	NA	13	True	AATAAA	-30	NA	100771539	100775994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100771644_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.2	chr11	+	4012	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	546	-72	-143	72	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGCTTGGAGTTATCTC	NA	False	NA	86	True	ACTAAA	-20	NA	100751027	100776067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.3	chr11	+	3745	19	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.4181269337694	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	False	NA	7	True	AATAAA	-24	NA	100751207	100775988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100751403_100752161_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.4	chr11	+	3612	18	FSM	ENSMUSG00000004043.15	ENSMUST00000107357.4	3605	18	-7	0	-7	0	multi-exon	FALSE	canonical	3	8	junction_16	10.1053276571729	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTGCTTCCTGGTTT	NA	False	NA	13	True	AATAAA	-30	NA	100751302	100775994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772887_100772993_100774659
ES.6357.5	chr11	+	3790	18	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	37	-6	intron_retention	FALSE	canonical	0	0	junction_12	11.6933127903875	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	False	NA	7	True	AATAAA	-24	NA	100751347	100775988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770616_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.6	chr11	+	7841	11	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	-7401	-1	intron_retention	FALSE	canonical	0	0	junction_1	14.34607960385	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTCTGCTTCCTGGTT	NA	False	NA	12	True	AATAAA	-29	NA	100762443	100775993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100765026_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100770198_100770436_100770644_100771102_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.7	chr11	+	2272	9	NIC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	-2258	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.8021737418423	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	False	NA	7	True	AATAAA	-24	NA	100767586	100775988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100767691_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ES.6357.8	chr11	+	181	1	Intergenic	novelGene_5135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGTAAGCAAAAATTGG	NA	False	NA	NA	False	NA	NA	NA	100768178	100768359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100768200_100768400
ES.6357.9	chr11	+	1916	3	ISM	ENSMUSG00000004043.15	ENSMUST00000107357.4	3605	18	20226	0	1691	0	3prime_fragment	FALSE	canonical	3	8	junction_1	15.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTGCTTCCTGGTTT	NA	False	NA	13	True	AATAAA	-30	NA	100771535	100775994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100772012_100772887_100772993_100774659
ES.6358.1	chr11	+	1763	1	Intergenic	novelGene_5136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAGAAAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	100807198	100808961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100807200_100809000
ES.6359.1	chr11	+	8505	1	Intergenic	novelGene_5137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAGGAGGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	100809688	100818193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100809700_100818200
ES.636.1	chr1	+	2358	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	11	2117	11	0	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGTTGTCATTGGTA	NA	False	NA	78	True	NA	NA	NA	63769783	63791697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.11	chr1	+	5274	9	NNC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_3	137.668476329914	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGTGGATCAGCTGGCT	NA	False	NA	4	True	AATAAA	-15	NA	63769803	63791623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63775527_63776719_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63790538_63791455
ES.636.12	chr1	+	3139	5	NNC	ENSMUSG00000025962.16	novel	2117	5	NA	NA	2	974	intron_retention	FALSE	canonical	0	0	junction_4	166.948158121017	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAAAAATGAGTT	NA	False	NA	NA	False	AAAAAG	-12	NA	63769803	63777980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63775527_63776719
ES.636.13	chr1	+	4455	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	36	-5	7	5	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTGATACTTGCACA	NA	False	NA	NA	False	NA	NA	NA	63769808	63793819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.14	chr1	+	2216	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	125.086350339765	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769825	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776964_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.15	chr1	+	3756	11	NIC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	26	0	intron_retention	FALSE	canonical	3	308	junction_4	55.3682219328019	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769827	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63788930_63790422_63790538_63791455
ES.636.16	chr1	+	4621	10	NNC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	26	-3	intron_retention	FALSE	canonical	0	0	junction_4	129.949087846351	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTCGTGGATCAGCTGG	NA	False	NA	2	True	AATAAA	-13	NA	63769827	63791621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63775527_63776719_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63790538_63791455
ES.636.17	chr1	+	2184	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	124.966177242266	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769836	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778466_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.18	chr1	+	2479	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	41	8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	124.599258451291	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCTGGCTGATCACTGC	NA	False	NA	13	True	AATAAA	-24	NA	63769842	63791632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63770096_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.19	chr1	+	2220	11	ISM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	784	2190	755	0	3prime_fragment	FALSE	canonical	3	308	junction_3	51.2485121735256	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63770556	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.2	chr1	+	4366	10	NIC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	13	0	intron_retention	FALSE	canonical	3	319	junction_1	48.7627159737417	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769785	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.20	chr1	+	2183	11	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	755	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	170.825085979782	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63770556	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63771381_63773890_63773995_63774677_63774750_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.21	chr1	+	2095	10	NIC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	755	-1	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	135.093748884448	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGTGGATCAGCTGGCT	NA	False	NA	4	True	AATAAA	-15	NA	63770556	63791623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63771381_63773890_63773995_63774621_63774731_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.22	chr1	+	4646	4	NIC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	760	11	intron_retention	FALSE	canonical	3	395	junction_2	14.0791413879619	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCTGATCACTGCAAC	NA	False	NA	16	True	AATAAA	-27	NA	63777632	63791635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63778514_63785000_63785165_63787116_63790538_63791455
ES.636.23	chr1	+	5681	5	ISM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	12491	-8	-4916	8	3prime_fragment	FALSE	canonical	3	395	junction_1	43.510774527696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATACTTGCACATGT	NA	False	NA	NA	False	NA	NA	NA	63782263	63793822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.24	chr1	+	3920	3	NIC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	-2342	3	intron_retention	FALSE	canonical	3	395	junction_1	6	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGATCAGCTGGCTGATC	NA	False	NA	8	True	AATAAA	-19	NA	63784837	63791627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63785165_63787116_63790538_63791455
ES.636.3	chr1	+	2748	12	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	118.288133997574	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769788	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63789954_63790538_63791455
ES.636.6	chr1	+	2549	11	FSM	ENSMUSG00000025962.16	ENSMUST00000128621.8	2613	11	-9	73	-7	0	multi-exon	FALSE	canonical	3	319	junction_1	49.2621558602544	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769792	63791624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ES.636.7	chr1	+	3759	11	NIC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	308	junction_4	43.8553303487729	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGTGGATCAGCTGGCT	NA	False	NA	4	True	AATAAA	-15	NA	63769801	63791623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63790538_63791455
ES.636.8	chr1	+	2868	6	NNC	ENSMUSG00000025962.16	novel	4486	12	NA	NA	0	974	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	149.720272508435	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGGAAAAAATGAGTT	NA	False	NA	NA	False	AAAAAG	-12	NA	63769801	63777980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775527_63776719
ES.636.9	chr1	+	1715	6	ISM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	30	16369	1	439	5prime_fragment	FALSE	canonical	3	308	junction_4	44.0545116872268	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACCTTGTCTGTTGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	63769802	63777445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937
ES.6360.14	chr11	-	4929	23	NIC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	10	0	intron_retention	FALSE	canonical	3	387	junction_2	54.5706191951204	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830295	100777635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
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ES.6360.77	chr11	-	2880	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	57	3105	33	19	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTGACACAGCATAGCC	NA	False	NA	NA	False	ATTAAA	-31	NA	100830173	100779028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.78	chr11	-	3481	23	NIC	ENSMUSG00000004040.17	novel	2927	24	NA	NA	-14	18	intron_retention	FALSE	canonical	3	73	junction_3	104.260015473077	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACTGACACAGCATAGC	NA	False	NA	NA	False	ATTAAA	-30	NA	100830244	100779029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.8	chr11	-	4371	23	NNC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	166.870440167373	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830277	100777635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100779587_100780303_100780367_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100793535_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.80	chr11	-	2668	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-26	3400	-26	183	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGAGAGCACCTCTGA	NA	False	NA	NA	False	GATAAA	-10	NA	100830256	100779323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.81	chr11	-	2763	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	56	1697	-5	174	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTATGTAAAGAGGAGAG	NA	False	NA	NA	False	GATAAA	-1	NA	100830310	100779332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.82	chr11	-	2639	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	-87	375	12	70	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGTGGTTCCAGATTT	NA	False	NA	NA	False	NA	NA	NA	100830293	100779436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.84	chr11	-	2567	16	NIC	ENSMUSG00000004040.17	novel	6042	24	NA	NA	5	17	intron_retention	FALSE	canonical	3	434	junction_9	50.7974627537855	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGACCCCAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	100830225	100785296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100799631_100802059_100802211_100830081
ES.6360.85	chr11	-	2077	16	NNC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_8	137.62422267416	671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	TTTAAA	-42	NA	100830244	100785313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100785663_100785889_100785989_100787148_100787233_100789276_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794558_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.86	chr11	-	2112	9	NIC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	29	2	intron_retention	FALSE	canonical	3	434	junction_2	56.958318093146	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTCTTTATGTGTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	100830276	100793560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6360.87	chr11	-	2191	2	ISM	ENSMUSG00000004040.17	ENSMUST00000138438.2	2506	24	1	20736	1	-3761	5prime_fragment	FALSE	canonical	3	630	junction_1	0	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100830304	100800242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_100802211_100830081
ES.6360.88	chr11	-	3428	1	NIC	ENSMUSG00000004040.17	novel	6042	24	NA	NA	-3	-30300	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTGAAGCTAGCCTG	NA	False	NA	NA	False	NA	NA	NA	100830209	100826781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100826800_100830200
ES.6360.9	chr11	-	4251	25	NNC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.743978778366	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830285	100777635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100778175_100778358_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ES.6361.1	chr11	-	3298	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	194	-1	-142	1	multi-exon	FALSE	canonical	2	4	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGGTTATATTGTC	NA	False	NA	2	True	AATAAA	-20	NA	100861519	100847557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100850152_100860815
ES.6362.1	chr11	+	187	1	Intergenic	novelGene_5138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAATTGAGTTT	7405	False	NA	NA	False	NA	NA	NA	100869572	100869759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100869600_100869800
ES.6363.1	chr11	-	205	1	Intergenic	novelGene_5139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCTACAAACTCATGAG	3761	False	NA	NA	False	NA	NA	NA	100878398	100878193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100878200_100878400
ES.6364.1	chr11	+	4017	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.1429673371169	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900264	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945837_100945970_100946259_100946432_100953137
ES.6364.10	chr11	+	4142	16	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-6	2	intron_retention	FALSE	canonical	3	143	junction_11	24.8474456545448	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTCGTGATTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	100900306	100935654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
ES.6364.12	chr11	+	3973	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	45.1429673371169	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900307	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939365_100945851_100945970_100946259_100946432_100953137
ES.6364.13	chr11	+	3972	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	45.1429673371169	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGCCTGTCTCTGAG	NA	False	NA	13	True	AATAAA	-18	NA	100900311	100954541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939372_100945851_100945970_100946259_100946432_100953137
ES.6364.15	chr11	+	4056	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.3033858751225	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTCTCTGAGTGT	NA	False	NA	16	True	AATAAA	-21	NA	100900317	100954544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900498_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ES.6364.16	chr11	+	6755	22	NNC	ENSMUSG00000019302.17	novel	2716	21	NA	NA	19	-2511	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	73.5327221343654	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTAGAAGCCAGCACTA	NA	False	NA	NA	False	NA	NA	NA	100900331	100950739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100914890_100914989_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945838_100945970_100946259_100950050_100950262
ES.6364.17	chr11	+	3466	22	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	44.9016057063813	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAAGCTGCCTGTCTCT	NA	False	NA	10	True	AATAAA	-15	NA	100900332	100954538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137_100953323_100953784
ES.6364.18	chr11	+	5605	19	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	20	0	intron_retention	FALSE	non_canonical	0	0	junction_12	60.6039561924206	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900332	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929670_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
ES.6364.19	chr11	+	3836	20	NIC	ENSMUSG00000019302.17	novel	2716	21	NA	NA	24	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	55.6070503112809	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAAAGCTGCCTGTCTC	NA	False	NA	9	True	AATAAA	-14	NA	100900336	100954537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
ES.6364.2	chr11	+	4003	21	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	-12	1	combination_of_known_junctions	FALSE	canonical	3	127	junction_18	25.9536124653197	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCTGAGTGTGT	NA	False	NA	18	True	AATAAA	-23	NA	100900265	100954546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ES.6364.20	chr11	+	3961	22	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	25	-2	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	56.386100151096	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAAAGCTGCCTGTCTC	NA	False	NA	9	True	AATAAA	-14	NA	100900337	100954537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ES.6364.21	chr11	+	871	7	ISM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	66	34925	31	-1	5prime_fragment	FALSE	canonical	3	25	junction_5	68.6547319725467	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGAAAGCTTACTCCC	NA	False	NA	NA	False	ATTAAA	-19	NA	100900343	100918325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092
ES.6364.24	chr11	+	2304	17	ISM	ENSMUSG00000019302.17	ENSMUST00000168757.9	3967	22	50	18885	50	2	5prime_fragment	FALSE	canonical	3	143	junction_12	25.0571222409917	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTCGTGATTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	100900362	100935654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341
ES.6364.25	chr11	+	3873	20	FSM	ENSMUSG00000019302.17	ENSMUST00000092663.4	3813	20	-66	6	-66	0	multi-exon	FALSE	canonical	3	127	junction_17	24.3376525088162	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGCTGCCTGTCTCTG	NA	False	NA	11	True	AATAAA	-16	NA	100902580	100954539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ES.6364.26	chr11	+	3889	21	ISM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	2303	8	-66	-2	3prime_fragment	FALSE	canonical	3	32	junction_18	47.5773055142891	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAAAGCTGCCTGTCTC	NA	False	NA	9	True	AATAAA	-14	NA	100902580	100954537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ES.6364.27	chr11	+	3885	20	NNC	ENSMUSG00000019302.17	novel	3813	20	NA	NA	-66	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	44.653048460795	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAAAGCTGCCTGTCTC	NA	False	NA	9	True	AATAAA	-14	NA	100902580	100954537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945837_100945970_100946259_100946432_100953137
ES.6364.28	chr11	+	501	4	ISM	ENSMUSG00000019302.17	ENSMUST00000154896.8	4162	16	27280	4941	-3114	-4941	internal_fragment	FALSE	canonical	3	143	junction_2	23.1708629293104	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCGTACCCGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	100927557	100930708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100927699_100928984_100929125_100929515_100929674_100930646
ES.6364.29	chr11	+	2023	6	NNC	ENSMUSG00000019302.17	novel	3967	22	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.3775600677038	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGCTGCCTGTCTCTG	NA	False	NA	11	True	AATAAA	-16	NA	100934716	100954539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946436_100953143
ES.6364.30	chr11	+	2456	3	ISM	ENSMUSG00000019302.17	ENSMUST00000092663.4	3813	20	42447	0	10453	0	3prime_fragment	FALSE	canonical	3	160	junction_2	9.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	4961	False	NA	17	True	AATAAA	-22	NA	100945093	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_100945970_100946259_100946432_100953137
ES.6364.31	chr11	+	3801	1	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	16100	2	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGCCTGTCTCTGAG	NA	False	NA	13	True	AATAAA	-18	NA	100950740	100954541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100950700_100954500
ES.6364.4	chr11	+	4008	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900277	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ES.6364.5	chr11	+	4024	21	NNC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	54.8396526247204	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900278	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945837_100945970_100946259_100946432_100953137
ES.6364.6	chr11	+	4010	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	1	-1295	1	0	multi-exon	FALSE	canonical	3	25	junction_5	41.6171839508634	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900278	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ES.6364.7	chr11	+	3879	20	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	45.3592615005813	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900280	100954545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
ES.6365.1	chr11	+	2451	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	88	21	88	-21	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGGCCTATTACATTAA	NA	False	NA	2	True	AATAAA	-12	NA	100960925	100968477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
ES.6365.2	chr11	+	5016	11	Fusion	ENSMUSG00000019301.6_ENSMUSG00000001751.10	novel	1339	6	NA	NA	101	-8	multi-exon	FALSE	canonical	0	0	junction_1	8.48587060943071	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTATCATGTGGAGGG	NA	False	NA	NA	False	NA	NA	NA	100960938	100971345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_100961816_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066_100969365_100969451_100969620_100969754_100969935_100970014_100970109_100970485_100970661_100970759
ES.6365.3	chr11	+	4979	4	NIC	ENSMUSG00000001751.10	novel	919	5	NA	NA	104	-21	intron_retention	FALSE	canonical	0	0	junction_1	9.20144916122817	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGGCCTATTACATTAA	NA	False	NA	2	True	AATAAA	-12	NA	100960941	100968477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100962476_100962721_100962869_100963042_100964930_100967066
ES.6365.4	chr11	+	2239	5	NIC	ENSMUSG00000001751.10	novel	2560	6	NA	NA	104	17	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.57321409974112	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGGAAGGGTTCAGG	NA	False	NA	40	True	ATTAAA	-18	NA	100960941	100968515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100961328_100962721_100962869_100963042_100963129_100964758_100964930_100967066
ES.6365.5	chr11	+	3885	2	Fusion	ENSMUSG00000019301.6_ENSMUSG00000001751.10	novel	1339	6	NA	NA	-1876	-9	intron_retention	FALSE	canonical	3	24	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGTATCATGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	100967360	100971344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_100970661_100970759
ES.6366.1	chr11	-	171	1	Intergenic	novelGene_5140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCTAA	3880	False	NA	NA	False	NA	NA	NA	100966738	100966567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_100966600_100966700
ES.6367.1	chr11	+	1385	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGGTTTTCTGTTT	3557	False	NA	26	True	ATTAAA	-17	NA	100973436	100977446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ES.6367.10	chr11	+	3153	7	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	9	-2	intron_retention	FALSE	canonical	3	146	junction_2	16.7870651263273	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTGTGTGGTTTTCTG	3580	False	NA	23	True	ATTAAA	-14	NA	100973459	100977443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976714_100976823_100976971_100977073
ES.6367.11	chr11	+	2985	8	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	9	-1	intron_retention	FALSE	canonical	3	146	junction_2	16.9272151355413	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3580	False	NA	24	True	ATTAAA	-15	NA	100973459	100977444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ES.6367.12	chr11	+	3529	17	Fusion	ENSMUSG00000001755.13_ENSMUSG00000017801.16	novel	2138	10	NA	NA	26	-1	multi-exon	FALSE	canonical	2	14	junction_10	68.7531817445564	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	3597	False	NA	17	True	AATAAA	-21	NA	100973476	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073_100977189_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.13	chr11	+	3825	16	Fusion	ENSMUSG00000001755.13_ENSMUSG00000017801.16	novel	2386	9	NA	NA	38	-1	intron_retention	FALSE	canonical	2	14	junction_9	67.8932495417132	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	3609	False	NA	17	True	AATAAA	-21	NA	100973488	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073_100977189_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.14	chr11	+	3233	6	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	38	-3	intron_retention	FALSE	canonical	3	146	junction_2	17.606816861659	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTTGTGTGGTTTTCT	3609	False	NA	22	True	ATTAAA	-13	NA	100973488	100977442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976971_100977073
ES.6367.16	chr11	+	1010	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	-21	837	-21	-148	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTGAACCTACCCAA	8202	False	NA	NA	False	NA	NA	NA	100978081	100982196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.17	chr11	+	1832	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	-7	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8216	False	NA	17	True	AATAAA	-21	NA	100978095	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.18	chr11	+	1703	8	NNC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.403890350311	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGTTTTAAGTCCTT	8229	False	NA	16	True	AATAAA	-20	NA	100978108	100983031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980608_100980696_100981934
ES.6367.19	chr11	+	1294	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	-16	687	-6	2	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTCTGCTTGGTCTC	8230	False	NA	8	True	NA	NA	NA	100978109	100982346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.2	chr11	+	2087	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	51	0	-2	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3562	False	NA	25	True	ATTAAA	-16	NA	100973441	100977445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ES.6367.20	chr11	+	1759	8	FSM	ENSMUSG00000017801.16	ENSMUST00000149411.8	679	8	0	-1080	0	-1	multi-exon	FALSE	canonical	2	2	junction_1	90.5047072854021	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8236	False	NA	17	True	AATAAA	-21	NA	100978115	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978141_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.21	chr11	+	1972	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	-8	1	2	-1	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8238	False	NA	17	True	AATAAA	-21	NA	100978117	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.22	chr11	+	1714	7	FSM	ENSMUSG00000017801.16	ENSMUST00000107303.10	1736	7	15	7	2	-7	multi-exon	FALSE	canonical	0	0	junction_1	122.609701446863	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAGGATTGTTTTAAG	8238	False	NA	11	True	AATAAA	-15	NA	100978117	100983026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978194_100978579_100978617_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.23	chr11	+	2151	7	NIC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	-1	-2	intron_retention	FALSE	canonical	0	0	junction_1	97.6138935921635	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGTTTTAAGTCCTT	8245	False	NA	16	True	AATAAA	-20	NA	100978124	100983031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980696_100981934
ES.6367.24	chr11	+	1137	8	NNC	ENSMUSG00000017801.16	novel	1965	8	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	92.0807099389288	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGCTTGGTCTCTTG	8246	False	NA	11	True	NA	NA	NA	100978125	100982349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980637_100980696_100981934
ES.6367.25	chr11	+	1117	8	NNC	ENSMUSG00000017801.16	novel	1965	8	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.1912097446562	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTCTGCTTGGTCTCT	8247	False	NA	9	True	NA	NA	NA	100978126	100982347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100978195_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.27	chr11	+	1825	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	9	131	5	-131	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTACTCTTATCCCATGT	8255	False	NA	NA	False	NA	NA	NA	100978134	100982902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ES.6367.29	chr11	+	2302	7	NIC	ENSMUSG00000017801.16	novel	1965	8	NA	NA	7	-1	intron_retention	FALSE	canonical	3	155	junction_1	42.4264068711929	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	8257	False	NA	17	True	AATAAA	-21	NA	100978136	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980696_100981934
ES.6367.3	chr11	+	2867	8	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	-2	2	intron_retention	FALSE	canonical	3	106	junction_1	27.0207780972272	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGGTTTTCTGTTTC	3562	False	NA	27	True	ATTAAA	-18	NA	100973441	100977447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976714_100976823_100976971_100977073
ES.6367.30	chr11	+	1865	9	NNC	ENSMUSG00000017801.16	novel	1965	8	NA	NA	127	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.227038425243	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAGGATTGTTTTAAG	8377	False	NA	11	True	AATAAA	-15	NA	100978256	100983026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980349_100980388_100980493_100980696_100981934
ES.6367.31	chr11	+	1751	6	NNC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	927	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.236340298412	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	9177	False	NA	17	True	AATAAA	-21	NA	100979056	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980444_100980696_100981934
ES.6367.4	chr11	+	2694	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_1	25.4972424979644	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3564	False	NA	25	True	ATTAAA	-16	NA	100973443	100977445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ES.6367.5	chr11	+	2845	8	NNC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_1	59.6315215917466	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3564	False	NA	24	True	ATTAAA	-15	NA	100973443	100977444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_100974876_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976971_100977073
ES.6367.6	chr11	+	3209	6	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	146	junction_2	14.0712472794703	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3570	False	NA	25	True	ATTAAA	-16	NA	100973449	100977445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615
ES.6367.7	chr11	+	2378	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	8	0	8	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3579	False	NA	25	True	ATTAAA	-16	NA	100973458	100977445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ES.6367.8	chr11	+	3090	7	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	8	0	intron_retention	FALSE	canonical	3	146	junction_2	15.0416089564913	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3579	False	NA	25	True	ATTAAA	-16	NA	100973458	100977445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823
ES.6367.9	chr11	+	2237	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	9	-1	intron_retention	FALSE	canonical	3	106	junction_1	27.8197322057564	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGTGGTTTTCTGT	3580	False	NA	24	True	ATTAAA	-15	NA	100973459	100977444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976714_100976823_100976971_100977073
ES.6368.1	chr11	-	2660	7	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	77	1400	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	148.134698463557	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCCTGAAATGGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	100986125	100981248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983
ES.6368.11	chr11	-	992	7	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	316	junction_6	39.1606378338703	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACTTAATTTCCTCT	NA	False	NA	22	True	AATATA	-10	NA	100986229	100982989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ES.6368.12	chr11	-	1003	7	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	-7	-7	intron_retention	FALSE	canonical	3	23	junction_5	148.134698463557	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACTTAATTTCCTCT	NA	False	NA	22	True	AATATA	-10	NA	100986209	100982989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983
ES.6368.13	chr11	-	954	7	NNC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	-3	-47	intron_retention	FALSE	non_canonical	0	0	junction_3	154.094577740065	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTATTTGTAATATTT	NA	False	NA	-18	True	AAAACA	-9	NA	100986229	100983029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983695_100983835_100984506_100984619_100985761_100985852_100985983
ES.6368.14	chr11	-	852	8	NNC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-9	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	142.928268008531	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGTATTTGTAATA	NA	False	NA	-21	True	AAAACA	-6	NA	100986211	100983032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100983283_100983357_100983418_100983549_100983596_100983684_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ES.6368.2	chr11	-	2629	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	41	-1379	5	1379	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTTTTGTAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100986221	100981269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ES.6368.3	chr11	-	3465	3	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	0	1139	intron_retention	FALSE	canonical	3	406	junction_2	15	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTAAACAAACTTTTTC	NA	False	NA	NA	False	NA	NA	NA	100986202	100981509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983604_100983688_100984619_100985761
ES.6368.4	chr11	-	2400	8	NIC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-9	1138	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	137.651141421689	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTAAACAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	100986211	100981510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984641_100985761_100985852_100985983_100986085_100986168
ES.6368.5	chr11	-	2383	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	41	-1133	5	1133	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTCACACACTAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	100986221	100981515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ES.6368.6	chr11	-	1236	5	NIC	ENSMUSG00000019303.15	novel	1030	7	NA	NA	-8	-9	intron_retention	FALSE	canonical	3	406	junction_3	11.6699400169838	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAACCTCCCAGATAT	NA	False	NA	-5	True	TATAAA	-21	NA	100986234	100982966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
ES.6368.7	chr11	-	982	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	-10	319	-10	-10	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATCAAACCTCCCAGATA	NA	False	NA	-6	True	TATAAA	-20	NA	100986272	100982967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ES.6368.8	chr11	-	1020	9	NNC	ENSMUSG00000019303.15	novel	1291	8	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.13755278191	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTAATTTCCTCTG	NA	False	NA	23	True	AATATA	-11	NA	100986211	100982988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100984921_100985042_100985761_100985852_100985983_100986085_100986168
ES.6369.1	chr11	+	3874	3	Antisense	novelGene_ENSMUSG00000017802.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100988020	100993445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_100989447_100989833_100990585_100991748
ES.637.1	chr1	-	4456	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTAAGTCGGTGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	63784006	63779550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63779600_63784000
ES.6370.1	chr11	+	3141	1	Intergenic	novelGene_5141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTCAATACTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	100997719	101000860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_100997700_101000900
ES.6371.1	chr11	-	3271	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	83	-189	33	-2	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGTCAATTGTTATTT	9878	False	NA	NA	False	CATAAA	-20	NA	101010636	100987149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ES.6371.10	chr11	-	2950	8	NNC	ENSMUSG00000017802.15	novel	3179	8	NA	NA	3	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.4172917682551	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAAGAGACTGCTGTT	9848	False	NA	-11	True	AATAAA	-17	NA	101010666	100987350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989944_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
ES.6371.12	chr11	-	3021	8	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	-31	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	36.1809511274897	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCTTTTAAGAGACTGC	9892	False	NA	-15	True	AATAAA	-13	NA	101010622	100987354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100997132_100997240_101010366
ES.6371.13	chr11	-	3048	9	NNC	ENSMUSG00000017802.15	novel	1783	11	NA	NA	18	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.820941971658	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCTTTTAAGAGACTG	9863	False	NA	-16	True	AATAAA	-12	NA	101010651	100987355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989944_100990498_100990582_100990914_100991033_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
ES.6371.14	chr11	-	3934	8	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	-34	-17	intron_retention	FALSE	canonical	3	80	junction_5	10.8946719799644	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCTTTTAAGAGACTG	9889	False	NA	-16	True	AATAAA	-12	NA	101010625	100987355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100994747_100997132_100997240_101010366
ES.6371.15	chr11	-	2853	6	NIC	ENSMUSG00000017802.15	novel	3179	8	NA	NA	2	-17	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	41.9456791576916	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCTTTTAAGAGACTG	9847	False	NA	-16	True	AATAAA	-12	NA	101010667	100987355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100997132_100997240_101010366
ES.6371.16	chr11	-	1666	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	13	1486	13	1	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGAGACATCGTATCT	9808	False	NA	NA	False	NA	NA	NA	101010706	100988824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ES.6371.2	chr11	-	3124	8	FSM	ENSMUSG00000017802.15	ENSMUST00000107295.10	3179	8	48	7	-30	-7	multi-exon	FALSE	canonical	3	12	junction_5	32.1222155944119	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGCATTTGTCAATTGT	9893	False	NA	NA	False	CATAAA	-15	NA	101010621	100987154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
ES.6371.3	chr11	-	4809	7	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	87	junction_4	8.74483974822994	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTCGTTGTGTACT	9823	False	NA	1	True	AATAAA	-29	NA	101010691	100987338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100994747_100997132_100997240_101010366
ES.6371.4	chr11	-	3162	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	3	0	3	0	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTCGTTGTGTACT	9798	False	NA	1	True	AATAAA	-29	NA	101010716	100987338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ES.6371.5	chr11	-	3072	9	NNC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.2180297428972	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTTTCGTTGTGTAC	9864	False	NA	0	True	AATAAA	-28	NA	101010650	100987339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989944_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ES.6371.6	chr11	-	2976	8	NIC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	29.3250606763817	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTTTCGTTGTGT	9848	False	NA	-2	True	AATAAA	-26	NA	101010666	100987341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_100989447_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ES.6371.7	chr11	-	3018	9	NNC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	-39	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.3146155013486	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGAGACTGCTGTTTC	9884	False	NA	-9	True	AATAAA	-19	NA	101010630	100987348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997192_101010366
ES.6371.8	chr11	-	3092	8	NNC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	36.1809511274897	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGAGACTGCTGTTTC	9848	False	NA	-9	True	AATAAA	-19	NA	101010666	100987348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993857_100997132_100997240_101010366
ES.6371.9	chr11	-	3114	9	NNC	ENSMUSG00000017802.15	novel	3165	9	NA	NA	-39	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.3146155013486	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGAGACTGCTGTTTC	9884	False	NA	-9	True	AATAAA	-19	NA	101010630	100987348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010318
ES.6372.1	chr11	+	2719	8	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	4	-2	intron_retention	FALSE	canonical	3	373	junction_6	113.625952769854	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1234	False	NA	14	True	AATAAA	-17	NA	101010767	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011825_101013498_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101016191_101016857
ES.6372.10	chr11	+	1695	10	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	185	-2	intron_retention	FALSE	canonical	3	373	junction_8	109.85287579753	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1415	False	NA	14	True	AATAAA	-17	NA	101010948	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101016191_101016857
ES.6372.11	chr11	+	1421	9	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	187	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	298.021706424213	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1417	False	NA	14	True	AATAAA	-17	NA	101010950	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101014784_101014869_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.12	chr11	+	2829	10	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	190	-4	intron_retention	FALSE	non_canonical	0	0	junction_2	218.440488265294	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCACCCCCCGGTCTC	1420	False	NA	12	True	AATAAA	-15	NA	101010953	101017241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101012399_101013022_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.13	chr11	+	2026	10	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	193	-2	intron_retention	FALSE	canonical	3	373	junction_7	110.112176247791	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1423	False	NA	14	True	AATAAA	-17	NA	101010956	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.14	chr11	+	806	3	ISM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	202	4999	202	-4408	5prime_fragment	FALSE	canonical	3	746	junction_1	10.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCTGTATCAGTACTG	1432	False	NA	NA	False	NA	NA	NA	101010965	101012246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101011069_101011372_101011486_101011656
ES.6372.15	chr11	+	1586	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	203	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	219.017099789035	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1433	False	NA	14	True	AATAAA	-17	NA	101010966	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015930_101016020_101016191_101016857
ES.6372.16	chr11	+	2474	9	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	203	-2	intron_retention	FALSE	canonical	1	2	junction_3	289.18419735525	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1433	False	NA	14	True	AATAAA	-17	NA	101010966	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011825_101013498_101013568_101014223_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015772_101015949_101016028
ES.6372.17	chr11	+	3340	10	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	203	0	intron_retention	FALSE	non_canonical	0	0	junction_3	227.125026753499	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1433	False	NA	16	True	AATAAA	-19	NA	101010966	101017245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011486_101011656_101012413_101013017_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.18	chr11	+	2407	9	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	209	-2	intron_retention	FALSE	canonical	3	585	junction_6	57.1860997096322	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1439	False	NA	14	True	AATAAA	-17	NA	101010972	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014866_101015058_101015146_101015248_101015949_101016028_101016191_101016857
ES.6372.19	chr11	+	1463	10	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	211	-2	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_4	220.99773754498	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1441	False	NA	14	True	AATAAA	-17	NA	101010974	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014784_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.2	chr11	+	1806	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	54	-58	54	58	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGACGGTTTCCTTC	1284	False	NA	74	True	NA	NA	NA	101010817	101017303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.20	chr11	+	1843	10	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	215	-2	intron_retention	FALSE	canonical	1	5	junction_4	222.823686042863	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1445	False	NA	14	True	AATAAA	-17	NA	101010978	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014784_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.22	chr11	+	3423	8	NNC	ENSMUSG00000035198.10	novel	852	3	NA	NA	1176	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	275.928414259783	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCACCCCCCGGTCTCT	69	False	NA	13	True	AATAAA	-16	NA	101011939	101017242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101012399_101013022_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016739_101016802
ES.6372.3	chr11	+	1835	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	74	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	211.726450874708	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1304	False	NA	14	True	AATAAA	-17	NA	101010837	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013389_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.4	chr11	+	2990	5	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	180	5	intron_retention	FALSE	canonical	3	651	junction_3	34.3465791600852	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGGTCTCTGAATTCAC	1410	False	NA	21	True	AATAAA	-24	NA	101010943	101017250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011825_101013498_101013568_101014239_101016191_101016857
ES.6372.6	chr11	+	1452	10	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	180	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	218.440488265294	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1410	False	NA	14	True	AATAAA	-17	NA	101010943	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011486_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ES.6372.8	chr11	+	2365	9	ISM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	182	2	182	-2	intron_retention	FALSE	canonical	3	373	junction_8	115.348317608017	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1412	False	NA	14	True	AATAAA	-17	NA	101010945	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795
ES.6372.9	chr11	+	2206	9	NIC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	184	-2	intron_retention	FALSE	canonical	3	585	junction_6	54.7492865250315	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCCCCCGGTCTCTG	1414	False	NA	14	True	AATAAA	-17	NA	101010947	101017243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101015146_101015248_101015949_101016028_101016191_101016857
ES.6373.1	chr11	+	2579	9	NNC	ENSMUSG00000045007.10	novel	1754	11	NA	NA	-46	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	98.7999873481773	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTTTGTTTGTGAC	1605	False	NA	NA	False	AATAAA	-21	NA	101046686	101052612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101047849_101048070_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ES.6373.2	chr11	+	1739	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	14	1	14	-1	multi-exon	FALSE	canonical	2	5	junction_5	90.3044295702044	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTTTGTTTGTGAC	1665	False	NA	NA	False	AATAAA	-21	NA	101046746	101052612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ES.6373.3	chr11	+	1286	9	NNC	ENSMUSG00000045007.10	novel	1754	11	NA	NA	966	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	99.3062655374775	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTTTGTTTGTGAC	2617	False	NA	NA	False	AATAAA	-21	NA	101047698	101052612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050854_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ES.6373.4	chr11	+	213	1	Intergenic	novelGene_5142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAGACAAATGGGTATG	2769	False	NA	NA	False	NA	NA	NA	101047850	101048063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101047800_101048100
ES.6374.1	chr11	-	3423	12	NIC	ENSMUSG00000035172.16	novel	3010	13	NA	NA	8	2	intron_retention	FALSE	canonical	3	7	junction_1	15.9109089870249	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGGGAGTGTTGTC	733	False	NA	5	True	AAGAAA	-24	NA	101062135	101053502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.10	chr11	-	3232	12	NIC	ENSMUSG00000035172.16	novel	3056	13	NA	NA	6	-2	intron_retention	FALSE	canonical	3	20	junction_3	15.7726617761281	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCTTCCTGTGGGAG	697	False	NA	-2	True	AAGAAA	-17	NA	101062171	101053509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101054524_101054838_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.11	chr11	-	4119	11	NIC	ENSMUSG00000035172.16	novel	3056	13	NA	NA	0	-4	intron_retention	FALSE	canonical	3	20	junction_3	17.0716138662986	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCCTTCCTGTGGG	725	False	NA	-4	True	AAGAAA	-15	NA	101062143	101053511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.2	chr11	-	3145	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	-88	-1	-88	1	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGGGAGTGTTGT	603	False	NA	4	True	AAGAAA	-23	NA	101062265	101053503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.3	chr11	-	3125	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	-111	-4	-77	1	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGGGAGTGTTGT	614	False	NA	4	True	AAGAAA	-23	NA	101062254	101053503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.4	chr11	-	3835	11	NIC	ENSMUSG00000035172.16	novel	2635	13	NA	NA	46	0	intron_retention	FALSE	canonical	3	7	junction_2	21.4336184532617	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	771	False	NA	3	True	AAGAAA	-22	NA	101062097	101053504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.5	chr11	-	3811	12	NIC	ENSMUSG00000035172.16	novel	3056	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	16.3064657864996	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	725	False	NA	3	True	AAGAAA	-22	NA	101062143	101053504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.6	chr11	-	3062	13	NIC	ENSMUSG00000035172.16	novel	2635	13	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	19.5867018379534	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	651	False	NA	3	True	AAGAAA	-22	NA	101062217	101053504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.7	chr11	-	3032	13	FSM	ENSMUSG00000035172.16	ENSMUST00000129895.8	2635	13	-400	3	-4	0	multi-exon	FALSE	canonical	3	7	junction_2	20.3856907876306	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTCCTGTGGGAGTG	687	False	NA	0	True	AAGAAA	-19	NA	101062181	101053507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.8	chr11	-	2938	12	NIC	ENSMUSG00000035172.16	novel	3010	13	NA	NA	25	0	intron_retention	FALSE	canonical	3	27	junction_3	15.0019282507173	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTCCTGTGGGAGTG	1112	False	NA	0	True	AAGAAA	-19	NA	101061756	101053507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101053891_101054331_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6374.9	chr11	-	3583	11	NIC	ENSMUSG00000035172.16	novel	3056	13	NA	NA	15	0	intron_retention	FALSE	canonical	3	20	junction_3	11.9012604374495	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTCCTGTGGGAGTG	706	False	NA	0	True	AAGAAA	-19	NA	101062162	101053507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ES.6375.1	chr11	+	4484	19	ISM	ENSMUSG00000017167.7	ENSMUST00000103109.4	5440	24	2813	-18	2813	18	3prime_fragment	FALSE	canonical	0	0	junction_2	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCCTGGCCAAGGAACTA	6182	False	NA	NA	False	AATAAA	-37	NA	101069679	101081568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101069826_101070319_101070464_101071135_101071398_101072057_101072208_101072463_101072636_101073028_101073136_101073258_101073379_101073708_101073913_101074039_101074197_101074280_101074409_101074677_101074864_101075356_101075579_101075872_101076113_101077334_101077689_101077825_101077954_101079088_101079183_101079334_101079581_101079689_101079738_101080192
ES.6375.2	chr11	+	3994	13	ISM	ENSMUSG00000017167.7	ENSMUST00000103109.4	5440	24	6473	-590	6473	590	3prime_fragment	FALSE	canonical	0	0	junction_7	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCGGCTGGAGCGCA	1349	False	NA	NA	False	ATTAAA	-23	NA	101073339	101082140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101073379_101073708_101073913_101074039_101074197_101074280_101074409_101074677_101074864_101075356_101075579_101075872_101076113_101077334_101077689_101077825_101077954_101079088_101079183_101079334_101079581_101079689_101079738_101080192
ES.6376.1	chr11	-	4128	20	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	7705	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	35.4131139926903	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTGTGTCCTCCGTGCT	NA	False	NA	-1	True	AATAAA	-21	NA	101109547	101081934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108086_101108190_101109479
ES.6376.13	chr11	-	3764	18	NNC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	36.9580328720513	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2644	False	NA	-8	True	AATAAA	-14	NA	101117250	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104678_101109519_101109547_101117221
ES.6376.15	chr11	-	4146	21	NNC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	34.2591228726014	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2645	False	NA	-8	True	AATAAA	-14	NA	101117249	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094258_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.16	chr11	-	4189	21	NNC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	34.6655448536439	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2643	False	NA	-8	True	AATAAA	-14	NA	101117251	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107971_101108068_101108190_101109479_101109547_101117221
ES.6376.18	chr11	-	4254	22	NNC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	45.271817005351	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2644	False	NA	-8	True	AATAAA	-14	NA	101117250	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101115790_101115878_101117221
ES.6376.19	chr11	-	4409	20	NIC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	3	0	intron_retention	FALSE	canonical	3	124	junction_19	14.9928884342247	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2621	False	NA	-8	True	AATAAA	-14	NA	101117273	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.24	chr11	-	4141	20	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	7705	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1704068054465	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGGCAAGTTGTGTC	NA	False	NA	-10	True	AATAAA	-12	NA	101109547	101081943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083820_101084039_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479
ES.6376.25	chr11	-	3393	3	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	31299	2	-729	-2	intron_retention	FALSE	canonical	3	133	junction_2	8.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGGCAAGTTGTGTC	9426	False	NA	-10	True	AATAAA	-12	NA	101085977	101081943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101083826_101084044_101084130_101084551
ES.6376.26	chr11	-	4098	20	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	35.6733409932085	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGGCAAGTTGTGTC	2644	False	NA	-10	True	AATAAA	-12	NA	101117250	101081943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101117221
ES.6376.27	chr11	-	4143	21	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	51.3257001900607	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGGCAAGTTGTGTC	2649	False	NA	-10	True	AATAAA	-12	NA	101117245	101081943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101548_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109527_101117221
ES.6376.3	chr11	-	4230	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107284.8	4207	21	-23	0	-23	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2582	False	NA	-7	True	AATAAA	-15	NA	101117312	101081940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.31	chr11	-	3889	19	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	36.740036022214	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGGCAAGTTGTGTC	2653	False	NA	-10	True	AATAAA	-12	NA	101117241	101081943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.32	chr11	-	4818	5	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	28876	3	-3152	-3	intron_retention	FALSE	canonical	3	133	junction_2	6.68487097856047	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGGCAAGTTGTGT	7003	False	NA	-11	True	AATAAA	-11	NA	101088400	101081944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711
ES.6376.33	chr11	-	3234	12	NNC	ENSMUSG00000006920.15	novel	3636	15	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	45.3961443005391	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGCTGCAGTTTATTT	2644	False	NA	NA	False	GATAAA	-23	NA	101117250	101088212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104684_101109519_101109547_101117221
ES.6376.34	chr11	-	1530	10	NNC	ENSMUSG00000006920.15	novel	3636	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.0934928378064	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGCTGCAGTTTAT	2652	False	NA	NA	False	GATAAA	-21	NA	101117242	101088214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101088328_101098553_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.35	chr11	-	3657	15	ISM	ENSMUSG00000006920.15	ENSMUST00000107284.8	4207	21	6	6279	6	-5	5prime_fragment	FALSE	canonical	3	124	junction_14	16.7309135849706	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATATTAGCTGCAG	2611	False	NA	NA	False	GATAAA	-16	NA	101117283	101088219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.36	chr11	-	2883	15	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	10	7035	2	487	5prime_fragment	FALSE	canonical	3	124	junction_14	16.7309135849706	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATGGGTTGAGTGTGG	2628	False	NA	NA	False	NA	NA	NA	101117266	101088976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.37	chr11	-	3517	14	NNC	ENSMUSG00000006920.15	novel	3636	15	NA	NA	6	461	intron_retention	FALSE	non_canonical	0	0	junction_2	61.9945597918639	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAAAGTGAAC	2632	False	NA	NA	False	NA	NA	NA	101117262	101089002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101090210_101090771_101090813_101091660_101091754_101094080_101094278_101094586_101094768_101098163_101099112_101100205_101100309_101101406_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
ES.6376.38	chr11	-	2663	14	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	2	256	intron_retention	FALSE	canonical	3	124	junction_13	17.3597507685324	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATGAGTGTTTTCCC	2644	False	NA	NA	False	TTTAAA	-14	NA	101117250	101089872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.39	chr11	-	3276	5	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	10	-4711	intron_retention	FALSE	canonical	3	124	junction_4	15.204851199535	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGATGGTATACCCTTGT	2652	False	NA	NA	False	AAGAAA	-39	NA	101117242	101103190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.4	chr11	-	3327	5	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	-1772	0	intron_retention	FALSE	canonical	3	138	junction_4	5.1234753829798	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	8383	False	NA	-7	True	AATAAA	-15	NA	101087020	101081940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101083826_101084044_101084633_101085293_101085376_101085711_101085808_101086344
ES.6376.40	chr11	-	156	1	Intergenic	novelGene_5143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	6363	False	NA	NA	False	NA	NA	NA	101113531	101113375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101113400_101113500
ES.6376.5	chr11	-	4918	19	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_13	47.9179146375328	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2625	False	NA	-7	True	AATAAA	-15	NA	101117269	101081940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101099112_101100205_101100309_101101212_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101109479_101109547_101117221
ES.6376.6	chr11	-	4256	21	NNC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	34.9191566335729	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2712	False	NA	-7	True	AATAAA	-15	NA	101117182	101081940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117065
ES.6376.7	chr11	-	4876	20	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	124	junction_19	15.018916972805	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2628	False	NA	-7	True	AATAAA	-15	NA	101117266	101081940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ES.6376.9	chr11	-	6245	9	NIC	ENSMUSG00000006920.15	novel	4193	21	NA	NA	32	0	intron_retention	FALSE	canonical	3	133	junction_2	12.3737373093177	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	1304	False	NA	-8	True	AATAAA	-14	NA	101094099	101081941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101090210_101090771_101090813_101091661_101091754_101094080
ES.6377.1	chr11	-	220	1	Intergenic	novelGene_5144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCAGCACTTGGGAGGC	2114	False	NA	NA	False	NA	NA	NA	101117780	101117560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101117600_101117800
ES.6378.1	chr11	+	1078	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	98	2	98	-2	multi-exon	FALSE	canonical	2	5	junction_2	6.16441400296898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCCTTCCTAGTGGG	NA	False	NA	15	True	AATAAA	-16	NA	101136951	101139074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
ES.6378.10	chr11	+	1084	6	FSM	ENSMUSG00000078656.12	ENSMUST00000107280.11	876	6	14	-222	-4	0	multi-exon	FALSE	canonical	3	35	junction_2	474.329252734849	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144574	101150371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101144634_101144856_101145003_101145744_101145823_101146834_101146924_101147703_101147780_101149735
ES.6378.11	chr11	+	969	5	FSM	ENSMUSG00000078656.12	ENSMUST00000144306.9	361	5	19	-627	-4	-2	multi-exon	FALSE	canonical	3	19	junction_3	527.253733983933	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTCGGCCTGTTACTA	NA	False	NA	14	True	ATTAAA	-11	NA	101144574	101150369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101147703_101147780_101149735
ES.6378.12	chr11	+	1058	6	NNC	ENSMUSG00000078656.12	novel	1106	6	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	483.779453883689	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTTACTACTGCTGAA	NA	False	NA	22	True	ATTAAA	-19	NA	101144574	101150377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147711_101147780_101149735
ES.6378.2	chr11	+	1576	8	FSM	ENSMUSG00000001240.14	ENSMUST00000128260.9	1478	8	-46	-52	33	52	multi-exon	FALSE	canonical	0	0	junction_2	550.818278119203	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCTGACTGAGTCTCAG	NA	False	NA	69	True	NA	NA	NA	101137170	101150424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101137399_101137880_101137971_101144429_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ES.6378.3	chr11	+	595	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	22	-2	0	2	multi-exon	FALSE	canonical	3	39	junction_5	475.771541813926	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGACTCTTTATT	NA	False	NA	3	True	AGTAAA	-19	NA	101144554	101148877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
ES.6378.4	chr11	+	1304	5	FSM	ENSMUSG00000078656.12	ENSMUST00000121331.2	790	5	-23	-491	0	2	multi-exon	FALSE	canonical	3	1136	junction_2	49.0019132279547	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCCTGTTACTACTGC	NA	False	NA	18	True	ATTAAA	-15	NA	101144555	101150373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ES.6378.5	chr11	+	1902	6	NNC	ENSMUSG00000078656.12	novel	1106	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	497.528129858001	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144555	101150371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101144634_101144856_101145003_101145768_101146062_101146250_101146924_101147703_101147780_101149735
ES.6378.6	chr11	+	3446	4	NNC	ENSMUSG00000078656.12	novel	876	6	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_2	580.655376851594	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCGGCCTGTTACTAC	NA	False	NA	15	True	ATTAAA	-12	NA	101144556	101150370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101144634_101144856_101146062_101146250_101147780_101149735
ES.6378.8	chr11	+	1218	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	2	0	1	0	multi-exon	FALSE	canonical	3	11	junction_5	486.921595331322	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144556	101150371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
ES.6379.1	chr11	-	2513	1	Antisense	novelGene_ENSMUSG00000078656.12_AS_novelGene_ENSMUSG00000001240.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	101150366	101147853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_101147900_101150400
ES.638.1	chr1	-	158	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	63813463	63813305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63813300_63813500
ES.6380.1	chr11	+	4275	18	NIC	ENSMUSG00000035112.18	novel	4117	19	NA	NA	-28	-3	intron_retention	TRUE	canonical	0	0	junction_3	0.831890330807703	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGTGGGTCTGTATC	NA	False	NA	NA	False	AATAAA	-13	NA	101151364	101168229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101152107_101153548_101153722_101154594_101154816_101155093_101155252_101155905_101155995_101156072_101156290_101159051_101159317_101159528_101159651_101159887_101159947_101160045_101160161_101160395_101160513_101164817_101164956_101165652_101166376_101166455_101166517_101166807_101167214_101167303_101167504_101167653_101167752_101167858
ES.6380.2	chr11	+	4108	19	NIC	ENSMUSG00000035112.18	novel	4117	19	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.853460638652068	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTGTGGGTCTGTATC	NA	False	NA	NA	False	AATAAA	-13	NA	101151384	101168229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101152107_101153548_101153722_101154594_101154816_101155093_101155252_101155905_101155995_101156072_101156290_101159051_101159317_101159528_101159651_101159887_101159947_101160045_101160161_101160395_101160513_101164817_101164956_101165652_101165696_101165800_101166376_101166455_101166517_101166807_101167214_101167303_101167504_101167653_101167710_101167858
ES.6381.1	chr11	-	2745	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	163	-2022	-8	2022	multi-exon	FALSE	canonical	3	1870	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAAAGAAAGAAA	5665	False	NA	NA	False	GGGGCT	-43	NA	101169777	101166771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101169279_101169539
ES.6381.2	chr11	-	823	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	173	-110	2	110	multi-exon	FALSE	canonical	3	1870	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACTTTTTCCGTGAGA	5675	False	NA	NA	False	NA	NA	NA	101169767	101168683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101169279_101169539
ES.6381.3	chr11	-	781	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	108	-3	-63	3	multi-exon	FALSE	canonical	3	1870	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTAGTGTGTGGGGGCAG	5610	False	NA	-2	True	AATAAA	-23	NA	101169832	101168790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101169279_101169539
ES.6382.1	chr11	+	1907	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	-37	465	-37	-465	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATACAGGCGTACCA	NA	False	NA	NA	False	AATACA	-19	NA	101169884	101179062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
ES.6382.2	chr11	+	2326	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	9	0	9	0	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTATTGTAAACATG	NA	False	NA	9	True	AATAAA	-14	NA	101169930	101179527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
ES.6382.3	chr11	+	6190	7	NNC	ENSMUSG00000078653.5	novel	2335	7	NA	NA	9	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.52034278178565	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGGTATTGTAAAC	NA	False	NA	6	True	AATAAA	-11	NA	101169930	101179524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101172128_101172171_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
ES.6383.1	chr11	-	4119	4	NIC	ENSMUSG00000035086.14	novel	3476	10	NA	NA	-311	4	intron_retention	FALSE	canonical	3	416	junction_3	60.7124369466422	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTACGCCTGTATGTTTT	NA	False	NA	2	True	AATAAA	-29	NA	101186573	101179083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101182359_101184826_101186258_101186359
ES.6383.10	chr11	-	2268	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	139.982702591404	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193066	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186711_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.11	chr11	-	1992	12	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_5	136.608446915244	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193115	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185860_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.12	chr11	-	5023	8	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	1	-1	intron_retention	FALSE	canonical	3	365	junction_4	37.5820191483282	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193062	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101182359_101184826_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.13	chr11	-	2010	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	132.301621336492	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193114	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186405_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.15	chr11	-	1994	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	179.519975177147	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193082	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185055_101185860_101185991_101186120_101186258_101186359_101186405_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.16	chr11	-	1951	11	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	144.198509007548	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGTGGTACGCCTGTA	NA	False	NA	-4	True	AATAAA	-23	NA	101193078	101179089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101192553_101192683_101192957
ES.6383.17	chr11	-	3503	10	FSM	ENSMUSG00000035086.14	ENSMUST00000139997.9	3476	10	-30	3	4	-3	multi-exon	FALSE	canonical	3	416	junction_6	43.6603048800878	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAAGTGGTACGCCTGT	NA	False	NA	-5	True	AATAAA	-22	NA	101193108	101179090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.18	chr11	-	2070	12	NIC	ENSMUSG00000035086.14	novel	2123	12	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	139.982702591404	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCAAGTGGTACGCCT	NA	False	NA	-7	True	AATAAA	-20	NA	101193068	101179092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187019_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.2	chr11	-	1898	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_10	138.568537805021	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACGCCTGTATGTT	NA	False	NA	0	True	AATAAA	-27	NA	101193062	101179085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189885_101192644_101192683_101192957
ES.6383.20	chr11	-	2540	10	NIC	ENSMUSG00000035086.14	novel	2662	11	NA	NA	-9	-5	intron_retention	FALSE	canonical	0	0	junction_2	194.434285448901	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCAAGTGGTACGCCT	NA	False	NA	-7	True	AATAAA	-20	NA	101193095	101179092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101182208_101182359_101184826_101184974_101185860_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.21	chr11	-	2598	11	NIC	ENSMUSG00000035086.14	novel	2662	11	NA	NA	-6	-5	intron_retention	FALSE	canonical	2	16	junction_5	142.167506836126	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACCAAGTGGTACGCCT	NA	False	NA	-7	True	AATAAA	-20	NA	101193092	101179092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185860_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.27	chr11	-	1610	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	8	2747	8	177	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCTACTTTATTTTCA	NA	False	NA	2	True	ATTAAA	-43	NA	101193104	101179524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.28	chr11	-	2247	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	-36	451	-10	163	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACCAAAATCCACAAAAG	NA	False	NA	-12	True	ATTAAA	-29	NA	101193122	101179538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.3	chr11	-	2742	10	NIC	ENSMUSG00000035086.14	novel	2662	11	NA	NA	1	2	intron_retention	FALSE	canonical	3	422	junction_7	41.4329742840734	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACGCCTGTATGTT	NA	False	NA	0	True	AATAAA	-27	NA	101193062	101179085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.4	chr11	-	2041	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	16	2308	-10	2	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACGCCTGTATGTT	NA	False	NA	0	True	AATAAA	-27	NA	101193096	101179085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.5	chr11	-	4675	5	NIC	ENSMUSG00000035086.14	novel	1599	10	NA	NA	-820	2	intron_retention	FALSE	canonical	3	416	junction_4	56.5375981095766	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTACGCCTGTATGTT	NA	False	NA	0	True	AATAAA	-27	NA	101187953	101179085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101182359_101184826_101184974_101185795_101186258_101186359
ES.6383.6	chr11	-	2848	11	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	-1	1	intron_retention	FALSE	canonical	3	365	junction_7	51.9161824482502	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGGTACGCCTGTATGT	NA	False	NA	-1	True	AATAAA	-26	NA	101193082	101179086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.7	chr11	-	2667	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	-5	0	-5	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193091	101179087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.8	chr11	-	2673	11	NIC	ENSMUSG00000035086.14	novel	2662	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	3	junction_5	145.90274157808	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193082	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185055_101185860_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ES.6383.9	chr11	-	2705	10	NIC	ENSMUSG00000035086.14	novel	2662	11	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	16	junction_5	149.831345514767	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTGGTACGCCTGTAT	NA	False	NA	-3	True	AATAAA	-24	NA	101193093	101179088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185860_101185991_101186120_101187143_101189834_101189903_101192553_101192683_101192957
ES.6384.1	chr11	+	5719	2	Intergenic	novelGene_5145	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	101198824	101206203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101201775_101203434
ES.6384.10	chr11	+	2565	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	427.085471539363	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207031	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.11	chr11	+	2739	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207037	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.12	chr11	+	3757	9	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	5	-1	intron_retention	FALSE	canonical	3	1173	junction_4	126.940869600771	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207043	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101208040_101208154_101208218_101208448_101208554_101210281_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.14	chr11	+	2574	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	404.576178608579	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	False	NA	25	True	ATTAAA	-26	NA	101207051	101214354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207153_101207220_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.16	chr11	+	1795	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	402.450990805092	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207054	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211596_101213425
ES.6384.17	chr11	+	1348	10	ISM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	18	2276	18	667	5prime_fragment	FALSE	canonical	3	1173	junction_6	77.5649469003513	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCTGATTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	101207056	101212087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552
ES.6384.18	chr11	+	2566	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	19	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	446.320512636379	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGCAGACCCTGGTG	NA	False	NA	24	True	ATTAAA	-25	NA	101207057	101214353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.19	chr11	+	2732	11	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	19	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	423.425329898909	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207057	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210419_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.2	chr11	+	2443	11	NNC	ENSMUSG00000078652.10	novel	778	6	NA	NA	-8214	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	422.411221441855	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTGCTGTACTCTGG	NA	False	NA	35	True	ATTAAA	-36	NA	101198824	101214364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101198879_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.20	chr11	+	2623	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-9	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	420.684870181945	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	False	NA	25	True	ATTAAA	-26	NA	101207058	101214354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207303_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.21	chr11	+	1006	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	667	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	400.386575699036	905	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCTGATTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	101207058	101212087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101211979
ES.6384.22	chr11	+	2879	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	531.540378102848	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207058	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101207416_101207653_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.23	chr11	+	2635	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	423.375483465918	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207058	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211394_101211442_101211552_101211640_101212617
ES.6384.24	chr11	+	3130	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-19	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	518.497320219093	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTCTAAAGCTGCAG	NA	False	NA	15	True	ATTAAA	-16	NA	101207058	101214344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101207416_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.25	chr11	+	4010	9	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-19	intron_retention	FALSE	canonical	3	1173	junction_5	77.191219546008	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTCTAAAGCTGCAG	NA	False	NA	15	True	ATTAAA	-16	NA	101207058	101214344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552
ES.6384.26	chr11	+	5572	8	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-9	intron_retention	FALSE	canonical	3	1173	junction_4	83.6042670525121	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	False	NA	25	True	ATTAAA	-26	NA	101207058	101214354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552
ES.6384.27	chr11	+	2758	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-3	intron_retention	FALSE	canonical	3	1173	junction_6	124.574832485895	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACCCTGGTGCTGTACT	NA	False	NA	31	True	ATTAAA	-32	NA	101207058	101214360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.29	chr11	+	2701	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	595.979075011229	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACCCTGGTGCTGTAC	NA	False	NA	30	True	ATTAAA	-31	NA	101207058	101214359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208552_101210293_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.3	chr11	+	2935	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	-269	-2	-269	2	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGCTGTACTCTGGT	NA	False	NA	36	True	ATTAAA	-37	NA	101206769	101214365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.31	chr11	+	3852	9	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-1	intron_retention	FALSE	canonical	3	1173	junction_5	82.2024938794438	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207058	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552
ES.6384.32	chr11	+	2865	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	531.540378102848	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207058	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101207416_101207653_101208020_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.33	chr11	+	2734	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	20	-6	intron_retention	FALSE	canonical	3	1173	junction_6	125.344069674114	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGACCCTGGTGCTGT	NA	False	NA	28	True	ATTAAA	-29	NA	101207058	101214357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211442_101211552_101211640_101212617
ES.6384.35	chr11	+	1688	10	ISM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	22	1932	22	-494	5prime_fragment	FALSE	canonical	3	1173	junction_6	77.5649469003513	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTCTCAGTGTGATCA	NA	False	NA	NA	False	ATTAAA	-10	NA	101207060	101212431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552
ES.6384.36	chr11	+	1453	2	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	27	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGCTGCAGACCCTGG	NA	False	NA	22	True	ATTAAA	-23	NA	101207065	101214351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207091_101212923
ES.6384.38	chr11	+	8597	12	Fusion	ENSMUSG00000078652.10_ENSMUSG00000078651.9	novel	2664	11	NA	NA	30	-10	intron_retention	FALSE	canonical	3	41	junction_11	393.281090988272	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGGAATGTAC	NA	False	NA	NA	False	NA	NA	NA	101207068	101220518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617_101219456_101219647
ES.6384.39	chr11	+	1890	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	30	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	404.576178608579	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	False	NA	25	True	ATTAAA	-26	NA	101207068	101214354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617_101212749_101213483
ES.6384.4	chr11	+	2902	10	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	-263	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	443.121949048335	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACCCTGGTGCTGTAC	NA	False	NA	30	True	ATTAAA	-31	NA	101206775	101214359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207327_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.41	chr11	+	7022	11	FSM	ENSMUSG00000078652.10_ENSMUSG00000078651.9	ENSMUST00000019470.14	2664	11	31	-4389	31	-1568	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTACCTGTCTATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	101207069	101218752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.45	chr11	+	2806	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	43	-1	intron_retention	FALSE	canonical	3	1243	junction_5	109.553639829994	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207081	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.46	chr11	+	2484	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	45	-12	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_11	398.236401406198	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAAGCTGCAGACCCTGG	NA	False	NA	22	True	ATTAAA	-23	NA	101207083	101214351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617_101212756_101212878
ES.6384.47	chr11	+	2587	11	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	46	-1	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	608.210004850298	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGGTGCTGTACTCT	NA	False	NA	33	True	ATTAAA	-34	NA	101207084	101214362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.49	chr11	+	2535	12	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	61	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.576178608579	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	False	NA	25	True	ATTAAA	-26	NA	101207099	101214354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617_101213643_101213701
ES.6384.5	chr11	+	2931	13	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	-261	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	581.051077072117	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGCAGACCCTGGTG	NA	False	NA	24	True	ATTAAA	-25	NA	101206777	101214353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617_101213643_101213701
ES.6384.50	chr11	+	3146	8	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	62	-73	intron_retention	FALSE	canonical	3	1173	junction_4	140.582897325415	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGTGTTTACCTCTTT	NA	False	NA	23	True	AATGAA	-16	NA	101207100	101212852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101208006_101208040_101208154_101210331_101210737_101210851_101211036_101211106_101211222_101211442_101211552_101211640_101212617
ES.6384.51	chr11	+	4487	5	ISM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	72	0	72	0	intron_retention	FALSE	canonical	3	1310	junction_3	29.1976026413129	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207110	101214363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281
ES.6384.52	chr11	+	1145	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	81	-75	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGACGTGTTTACCTCT	NA	False	NA	21	True	AATGAA	-14	NA	101207119	101212850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.53	chr11	+	1771	4	NNC	ENSMUSG00000078652.10	novel	778	6	NA	NA	752	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	732.635577138381	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCAGACCCTGGTGCT	NA	False	NA	26	True	ATTAAA	-27	NA	101211411	101214355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101211442_101211552_101211640_101212617_101213452_101213535
ES.6384.54	chr11	+	6082	4	Fusion	ENSMUSG00000078652.10_ENSMUSG00000078651.9	novel	2543	4	NA	NA	-2157	-2	multi-exon	FALSE	canonical	3	20	junction_1	9.46337971105226	916	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAATGTACACACTCCT	NA	False	NA	NA	False	NA	NA	NA	101213731	101220526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_101218894_101219169_101219456_101219647_101219778_101220022
ES.6384.55	chr11	+	4081	1	NIC	ENSMUSG00000078651.9	novel	2543	4	NA	NA	525	-10	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGGAATGTAC	NA	False	NA	NA	False	NA	NA	NA	101216437	101220518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101216400_101220500
ES.6384.56	chr11	+	3343	3	NIC	ENSMUSG00000078651.9	novel	2543	4	NA	NA	826	-10	intron_retention	FALSE	canonical	3	22	junction_2	9.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGGAATGTAC	NA	False	NA	NA	False	NA	NA	NA	101216738	101220518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101219456_101219647_101219778_101220022
ES.6384.57	chr11	+	1432	4	NNC	ENSMUSG00000078651.9	novel	2543	4	NA	NA	2665	194	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	9.46337971105226	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGCTCTGTTCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	101218577	101220722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101218894_101219169_101219456_101219647_101219778_101220022
ES.6384.6	chr11	+	3249	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	-257	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	422.98680830494	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGCAGACCCTGGTG	NA	False	NA	24	True	ATTAAA	-25	NA	101206781	101214353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101207653_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6384.8	chr11	+	1301	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	-144	1507	-144	-69	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTACCTCTTTTTTC	NA	False	NA	27	True	AATGAA	-20	NA	101206894	101212856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ES.6385.1	chr11	+	181	1	Intergenic	novelGene_5146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATTGAATTACATCTC	NA	False	NA	NA	False	NA	NA	NA	101225792	101225973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101225800_101226000
ES.6386.1	chr11	-	138	1	Intergenic	novelGene_5147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	101246632	101246494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101246500_101246600
ES.6387.1	chr11	-	207	1	Intergenic	novelGene_5148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTCCCTACTGCACAG	NA	False	NA	NA	False	NA	NA	NA	101247613	101247406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101247400_101247600
ES.6388.1	chr11	-	133	1	Intergenic	novelGene_5149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	9815	False	NA	NA	False	NA	NA	NA	101269133	101269000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101269000_101269100
ES.6389.1	chr11	-	180	1	Intergenic	novelGene_5150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTCAAAGTCCTT	NA	False	NA	NA	False	NA	NA	NA	101279511	101279331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101279300_101279500
ES.639.1	chr1	-	151	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	63966960	63966809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_63966800_63967000
ES.6390.1	chr11	-	1468	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	221	-173	-10	173	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTGTGGTATAGTTGC	NA	False	NA	-3	True	ATTAAA	-38	NA	101308220	101297491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ES.6390.11	chr11	-	1895	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-15	-3	intron_retention	FALSE	canonical	0	0	junction_11	271.943874860936	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGTTGTATACTGCC	NA	False	NA	-24	True	AGTAAA	-13	NA	101308247	101297667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302824_101304762_101304923_101307674_101307752_101307928_101308061_101308165
ES.6390.12	chr11	-	1255	12	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	178.816725972721	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGTTGTATACTGCC	NA	False	NA	-24	True	AGTAAA	-13	NA	101308259	101297667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308040_101308230
ES.6390.13	chr11	-	3234	9	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	7	-4	intron_retention	FALSE	canonical	1	9	junction_1	188.2624082896	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACATGGTTGTATACTGC	NA	False	NA	-25	True	AGTAAA	-12	NA	101308225	101297668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101297851_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302277_101302765_101304923_101307928_101308061_101308175
ES.6390.3	chr11	-	1832	11	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-19	17	intron_retention	FALSE	canonical	3	448	junction_10	70.356307464221	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTTAGTGTGCATAA	NA	False	NA	-4	True	AGTAAA	-33	NA	101308251	101297647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302824_101304762_101304923_101307928_101308061_101308175
ES.6390.4	chr11	-	1357	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	174	-15	-35	15	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTATGTTAGTGTGCAT	NA	False	NA	-6	True	AGTAAA	-31	NA	101308267	101297649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ES.6390.5	chr11	-	3288	11	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-42	0	intron_retention	FALSE	canonical	3	448	junction_10	71.4675450816663	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308274	101297664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101304923_101307928_101308061_101308175
ES.6390.6	chr11	-	2870	10	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	448	junction_9	73.8513689200006	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308200	101297664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302824_101304762_101304923_101307928_101308061_101308175
ES.6390.7	chr11	-	3572	10	NNC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	-76	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	253.409637631335	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTTGTATACTGCCA	NA	False	NA	-23	True	AGTAAA	-14	NA	101305481	101297666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302051_101302119_101302277_101302765_101303979_101304045
ES.6390.8	chr11	-	2898	10	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	2	-3	intron_retention	FALSE	canonical	2	10	junction_6	193.130928531801	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGTTGTATACTGCC	NA	False	NA	-24	True	AGTAAA	-13	NA	101308206	101297667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302051_101302119_101302824_101304762_101304923_101307928_101308061_101308175
ES.6391.1	chr11	+	4141	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	-924	6	-924	-6	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATAGCTCCTCTGCACTC	NA	False	NA	29	True	AATAAA	-33	NA	101314986	101326493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ES.6391.10	chr11	+	928	2	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	16	5804	16	-5804	5prime_fragment	FALSE	canonical	3	59	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCAGGTAGTGATGG	NA	False	NA	NA	False	NA	NA	NA	101315926	101320695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101316437_101320277
ES.6391.11	chr11	+	3109	1	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	7457	-23	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTTCTCTGCAAAGCCC	319	False	NA	12	True	AATAAA	-16	NA	101323367	101326476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101323400_101326500
ES.6391.2	chr11	+	3822	5	NNC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	-6	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.4840371316348	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCTTCTCTGCAAAGCC	NA	False	NA	11	True	AATAAA	-15	NA	101315904	101326475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101316437_101320277_101320695_101321814_101322373_101322907_101323025_101324277
ES.6391.3	chr11	+	3116	1	Genic_Genomic	ENSMUSG00000035007.6	novel	NA	NA	NA	NA	-3	-7476	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGGCTATGAGGAACA	NA	False	NA	NA	False	NA	NA	NA	101315907	101319023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_101315900_101319000
ES.6391.5	chr11	+	3208	5	NNC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	5	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.5541016225431	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTCTGCAAAGCCCAT	NA	False	NA	14	True	AATAAA	-18	NA	101315915	101326478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101316448_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ES.6391.7	chr11	+	7034	4	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	8	-22	intron_retention	FALSE	canonical	3	47	junction_2	3.29983164553722	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTCTCTGCAAAGCCCA	NA	False	NA	13	True	AATAAA	-17	NA	101315918	101326477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101320437_101322173_101322373_101322907_101323025_101324277
ES.6391.8	chr11	+	3918	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	13	-708	13	708	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAACCTTTG	NA	False	NA	NA	False	NA	NA	NA	101315923	101327207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ES.6391.9	chr11	+	5460	3	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	14	-21	intron_retention	FALSE	canonical	3	54	junction_2	2.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCTCTGCAAAGCCCAT	NA	False	NA	14	True	AATAAA	-18	NA	101315924	101326478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101316437_101320277_101323025_101324277
ES.6392.1	chr11	+	268	1	Intergenic	novelGene_5151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAAACTTACGGT	5999	False	NA	NA	False	NA	NA	NA	101329047	101329315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101329000_101329300
ES.6393.1	chr11	+	127	1	Intergenic	novelGene_5152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAATAAAAAAAAAAAAA	6540	False	NA	NA	False	NA	NA	NA	101329588	101329715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101329600_101329700
ES.6394.1	chr11	+	440	1	Intergenic	novelGene_5153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAATAAATCT	817	False	NA	NA	False	NA	NA	NA	101331699	101332139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101331700_101332100
ES.6394.2	chr11	+	330	1	Intergenic	novelGene_5154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCAGTTCCAGGGCAT	819	False	NA	NA	False	NA	NA	NA	101331701	101332031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101331700_101332000
ES.6395.1	chr11	+	691	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	-90	13	-90	-13	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATACAAGT	2151	False	NA	49	True	ATTAAA	-5	NA	101333033	101336342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ES.6395.10	chr11	+	845	3	ISM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-25	20	-17	-20	intron_retention	FALSE	canonical	3	11633	junction_1	768.5	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2364	False	NA	42	True	NA	NA	NA	101333246	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101333632_101334326_101334497_101336045
ES.6395.11	chr11	+	458	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-13	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4348.16311791543	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2368	False	NA	42	True	NA	NA	NA	101333250	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101333283_101333548_101333632_101334326_101334488_101336045_101336157_101336264
ES.6395.2	chr11	+	628	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-88	-20	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	5069.24424224164	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2153	False	NA	42	True	NA	NA	NA	101333035	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101333229_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ES.6395.3	chr11	+	494	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-53	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5091.99216294566	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2328	False	NA	42	True	NA	NA	NA	101333210	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101333287_101333565_101333632_101334326_101334497_101336045_101336157_101336264
ES.6395.4	chr11	+	2428	2	ISM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-59	20	-51	-20	intron_retention	FALSE	canonical	3	11633	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2330	False	NA	42	True	NA	NA	NA	101333212	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101333632_101334326
ES.6395.5	chr11	+	757	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-38	13	-30	-13	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATACAAGT	2351	False	NA	49	True	ATTAAA	-5	NA	101333233	101336342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ES.6395.6	chr11	+	1824	6	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-28	1521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	4561.44351713358	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CGAAAAAAAAAAAAAAAAAA	2353	False	NA	NA	False	NA	NA	NA	101333235	101337876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264_101337492_101337690
ES.6395.7	chr11	+	3006	2	FSM	ENSMUSG00000063316.14	ENSMUST00000152162.2	548	2	-2458	0	-22	0	multi-exon	FALSE	canonical	3	8302	junction_1	0	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2359	False	NA	62	True	ATTAAA	-18	NA	101333241	101336355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101336157_101336264
ES.6395.9	chr11	+	2718	3	NIC	ENSMUSG00000063316.14	novel	614	5	NA	NA	-20	-20	intron_retention	FALSE	canonical	3	8302	junction_2	303.5	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATTAAAAAAAAAAAAA	2361	False	NA	42	True	NA	NA	NA	101333243	101336335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101333283_101333548_101336157_101336264
ES.6396.1	chr11	-	4010	4	NIC	ENSMUSG00000097487.8	novel	853	7	NA	NA	-212	-2	intron_retention	FALSE	canonical	2	8	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCCCTTCCCTTCCTG	NA	False	NA	-12	True	AATAAA	-12	NA	101316371	101309639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101310013_101310500_101310555_101312690_101314705_101314802
ES.6397.1	chr11	-	3249	3	Antisense	novelGene_ENSMUSG00000063316.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCCATCCATTACCACG	4879	False	NA	NA	False	NA	NA	NA	101333146	101323490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_101326387_101328006_101328224_101333010
ES.6397.2	chr11	-	3225	3	Antisense	novelGene_ENSMUSG00000035007.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCTGTCCA	4979	False	NA	NA	False	NA	NA	NA	101333046	101323502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_101326387_101328006_101328224_101332922
ES.6398.1	chr11	+	218	1	Intergenic	novelGene_5155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGGGCTTTTTAGTTGG	268	False	NA	NA	False	NA	NA	NA	101338037	101338255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101338000_101338300
ES.6399.1	chr11	+	1130	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	-4	236	-4	-2	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTGTGATGGTCTTC	977	False	NA	3	True	NA	NA	NA	101339228	101349288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ES.6399.2	chr11	+	1360	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	4	-2	4	2	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCATTCTCCAGCAACTC	985	False	NA	NA	False	NA	NA	NA	101339236	101349526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ES.6399.3	chr11	+	1325	6	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	4	236	4	-2	intron_retention	FALSE	canonical	3	40	junction_3	7.94984276574072	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTGTGATGGTCTTC	985	False	NA	3	True	NA	NA	NA	101339236	101349288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716
ES.6399.4	chr11	+	1172	5	FSM	ENSMUSG00000010358.14	ENSMUST00000131024.2	1020	5	-154	2	9	-2	multi-exon	FALSE	canonical	1	3	junction_2	22.7087538187369	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTGTGATGGTCTTC	990	False	NA	3	True	NA	NA	NA	101339241	101349288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101339449_101347391_101347491_101348241_101348349_101348445_101348633_101348716
ES.6399.5	chr11	+	1211	6	NIC	ENSMUSG00000010358.14	novel	1362	7	NA	NA	10	-4	intron_retention	FALSE	canonical	3	40	junction_3	8.03990049689671	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTGGTGTGATGGTCT	991	False	NA	1	True	NA	NA	NA	101339242	101349286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348633_101348716_101348824_101349026
ES.6399.6	chr11	+	1473	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	36	237	-1	-3	intron_retention	FALSE	canonical	3	40	junction_3	9.17726659862414	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGTGTGATGGTCTT	1017	False	NA	2	True	NA	NA	NA	101339268	101349287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241
ES.6399.7	chr11	+	159	1	Intergenic	novelGene_5156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	2174	False	NA	NA	False	NA	NA	NA	101340425	101340584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101340400_101340600
ES.64.1	chr1	+	175	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTTTTAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	9777918	9778093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9777900_9778100
ES.640.1	chr1	+	1946	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAACCTAAAAACA	6242	False	NA	NA	False	NA	NA	NA	64156367	64158313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_64156400_64158300
ES.640.2	chr1	+	1480	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTAAGCTAG	6242	False	NA	NA	False	AAGAAA	-41	NA	64156367	64157847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_64156400_64157800
ES.6400.1	chr11	-	179	1	Intergenic	novelGene_5157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101344360	101344181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101344200_101344400
ES.6401.1	chr11	+	1761	6	NNC	ENSMUSG00000001313.13	novel	831	5	NA	NA	-5290	-4916	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGGACACGCGTCAGGAA	2519	False	NA	NA	False	NA	NA	NA	101350534	101357015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101351099_101351197_101351444_101353022_101353116_101353218_101353384_101353731_101353942_101356532
ES.6401.2	chr11	+	1354	5	NNC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	-528	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.0446286306095	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTATGGACTTAGTT	7281	False	NA	16	True	AATAAA	-16	NA	101355296	101362674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101355527_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ES.6401.3	chr11	+	1611	6	FSM	ENSMUSG00000001313.13	ENSMUST00000153185.8	1578	6	-39	6	-39	-6	multi-exon	FALSE	canonical	3	12	junction_1	71.7568115233669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	7770	False	NA	15	True	AATAAA	-15	NA	101355785	101362673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101355971_101356456_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ES.6401.4	chr11	+	1244	5	NIC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	25	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	68.3245929369506	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	7834	False	NA	15	True	AATAAA	-15	NA	101355849	101362673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101355971_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ES.6401.5	chr11	+	1396	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	-5	3	-5	-3	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTATGGACTTAGTTTT	NA	False	NA	18	True	AATAAA	-18	NA	101358995	101362676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ES.6401.6	chr11	+	1333	5	NNC	ENSMUSG00000001313.13	novel	1394	5	NA	NA	44	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	66.0321891201556	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCTATGGACTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	101359044	101362673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361668_101361883
ES.6401.7	chr11	+	1217	6	NNC	ENSMUSG00000001313.13	novel	1394	5	NA	NA	55	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.8184686218949	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGCTATGGACTTAG	NA	False	NA	14	True	AATAAA	-14	NA	101359055	101362672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883_101362364_101362478
ES.6401.8	chr11	+	3629	1	Genic_Genomic	ENSMUSG00000001313.13	novel	NA	NA	NA	NA	2008	1958	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101361008	101364637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_101361000_101364600
ES.6402.1	chr11	-	2800	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	-23	-11	-23	11	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGTATCTGAGAGTTGC	NA	False	NA	0	True	AATAAA	-26	NA	101357079	101349559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ES.6402.2	chr11	-	2210	7	NNC	ENSMUSG00000034993.8	novel	2766	6	NA	NA	49	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.514491923521	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGTATCTGAGAGTT	NA	False	NA	-2	True	AATAAA	-24	NA	101357007	101349561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101349909_101350424_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ES.6402.3	chr11	-	5360	5	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	1	-4	1	4	intron_retention	FALSE	canonical	3	328	junction_1	11.7127067751225	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGATGTTGTATCTGA	NA	False	NA	-7	True	AATAAA	-19	NA	101357055	101349566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734
ES.6402.6	chr11	-	2736	6	NNC	ENSMUSG00000034993.8	novel	2766	6	NA	NA	32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	137.300254916005	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTGACCAGATGTTGTA	NA	False	NA	-12	True	AATAAA	-14	NA	101357024	101349571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353939_101356526
ES.6402.7	chr11	-	2313	6	NNC	ENSMUSG00000034993.8	novel	2766	6	NA	NA	1026	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	135.704974116648	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTGACCAGATGTTGT	NA	False	NA	-13	True	AATAAA	-13	NA	101356030	101349572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101355958
ES.6403.1	chr11	-	194	1	Intergenic	novelGene_5158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101360698	101360504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101360500_101360700
ES.6404.1	chr11	+	181	1	Intergenic	novelGene_5159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGATA	2092	False	NA	NA	False	NA	NA	NA	101372810	101372991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101372800_101373000
ES.6405.1	chr11	-	153	1	Intergenic	novelGene_5160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	101373924	101373771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101373800_101373900
ES.6406.1	chr11	+	4050	1	Antisense	novelGene_ENSMUSG00000017146.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2866	False	NA	NA	False	NA	NA	NA	101427957	101432007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_101428000_101432000
ES.6407.1	chr11	+	202	1	Intergenic	novelGene_5161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAACTAATTTCAAATTT	NA	False	NA	NA	False	NA	NA	NA	101438088	101438290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101438100_101438300
ES.6408.1	chr11	-	4325	1	Genic_Genomic	ENSMUSG00000017146.13	novel	NA	NA	NA	NA	19141	4051	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTCTGATTACTGGA	NA	False	NA	NA	False	NA	NA	NA	101379863	101375538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_101375500_101379900
ES.6408.10	chr11	-	6301	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-3	7	intron_retention	FALSE	canonical	1	1	junction_8	76.226420092914	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGACTGATTGGGGG	NA	False	NA	-4	True	AATAAA	-22	NA	101442708	101379582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.12	chr11	-	6568	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-15	4	intron_retention	FALSE	canonical	1	15	junction_21	75.0092964759911	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGAATGACTGATTGG	NA	False	NA	-7	True	AATAAA	-19	NA	101442796	101379585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101442594
ES.6408.13	chr11	-	7660	16	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-5854	3	intron_retention	FALSE	canonical	3	266	junction_5	41.597222129475	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGAATGACTGATTG	3742	False	NA	-8	True	AATAAA	-18	NA	101421886	101379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817
ES.6408.15	chr11	-	6831	25	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-3	3	intron_retention	FALSE	canonical	0	0	junction_7	133.936759538058	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGAATGACTGATTG	NA	False	NA	-8	True	AATAAA	-18	NA	101442708	101379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101393495_101393660_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413327_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101423745_101423837_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.16	chr11	-	6626	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	17	3	intron_retention	FALSE	canonical	0	0	junction_21	97.0482701014224	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGAATGACTGATTG	NA	False	NA	-8	True	AATAAA	-18	NA	101442688	101379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101436367_101436436_101439840_101439940_101442594
ES.6408.17	chr11	-	6411	24	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	74.5096636759045	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGAATGACTGATTG	NA	False	NA	-8	True	AATAAA	-18	NA	101442689	101379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101415224_101415371_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.18	chr11	-	6595	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	15	3	intron_retention	FALSE	canonical	0	0	junction_22	76.0425609404376	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAAGAATGACTGATTG	NA	False	NA	-8	True	AATAAA	-18	NA	101442690	101379586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439975_101442594
ES.6408.19	chr11	-	5547	15	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-1	2	intron_retention	FALSE	non_canonical	0	0	junction_3	90.4108536016533	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAGAATGACTGATT	NA	False	NA	-9	True	AATAAA	-17	NA	101442782	101379587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383058_101408244_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.2	chr11	-	6694	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	-109	-13	-33	13	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGATTGGGGGCCTGGT	NA	False	NA	2	True	AATAAA	-28	NA	101442814	101379576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.20	chr11	-	3701	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	74.5096636759045	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACAAAGAATGACTGAT	NA	False	NA	-10	True	AATAAA	-16	NA	101442677	101379588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101414281_101417124_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.21	chr11	-	14216	19	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	33	0	intron_retention	FALSE	canonical	3	266	junction_5	37.016512831738	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442672	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101403676_101408096_101408269_101413257_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.22	chr11	-	3359	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	115.947738654851	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442715	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101434981_101435074_101439840_101439940_101442594
ES.6408.23	chr11	-	7379	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	15	0	intron_retention	FALSE	canonical	3	266	junction_5	36.6692021386821	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442690	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.24	chr11	-	4269	4	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	55343	0	11642	0	3prime_fragment	FALSE	canonical	3	353	junction_3	16.3095064303001	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101387362	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377
ES.6408.25	chr11	-	4919	21	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	28	0	intron_retention	FALSE	canonical	2	7	junction_12	77.8099608019436	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442677	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.26	chr11	-	4610	20	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	17	0	intron_retention	FALSE	canonical	1	3	junction_10	105.451095385518	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442688	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.27	chr11	-	6720	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_23	93.9754824640333	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442780	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101441522_101441596_101442594
ES.6408.28	chr11	-	6465	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	18	0	intron_retention	FALSE	canonical	2	2	junction_18	77.5319113585597	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442687	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.29	chr11	-	6418	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	24	0	intron_retention	FALSE	canonical	1	3	junction_10	76.8523040903194	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442681	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.31	chr11	-	6700	25	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	37	0	intron_retention	FALSE	canonical	0	0	junction_21	122.81178434906	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442668	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101434981_101435074_101439840_101439940_101441522_101441596_101442594
ES.6408.33	chr11	-	6473	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_8	75.1020792924509	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442708	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398877_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.34	chr11	-	6578	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-24	0	intron_retention	FALSE	canonical	0	0	junction_4	76.1657745093659	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442729	101379589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384415_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.36	chr11	-	1931	10	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-1788	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.511381459553	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101400792	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380728_101382695_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746
ES.6408.37	chr11	-	6661	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	1	-1	intron_retention	FALSE	canonical	2	5	junction_18	95.9805233865977	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442704	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101423745_101423837_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.38	chr11	-	6542	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	14	-1	intron_retention	FALSE	non_canonical	0	0	junction_13	76.1370149225875	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442691	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413314_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.39	chr11	-	6633	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	30	-1	intron_retention	FALSE	canonical	0	0	junction_21	97.1790972257828	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442675	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101434981_101435074_101439840_101439940_101442594
ES.6408.41	chr11	-	8055	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	16	-1	intron_retention	FALSE	canonical	3	266	junction_5	36.6692021386821	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442689	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.42	chr11	-	3263	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	76.2771530776592	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442712	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.43	chr11	-	3096	2	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	58073	1	14372	-1	intron_retention	FALSE	canonical	3	392	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101384632	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101380739_101382684
ES.6408.44	chr11	-	6407	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	24	-1	intron_retention	FALSE	canonical	0	0	junction_17	77.9526572994491	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGACAAAGAATGACTG	NA	False	NA	-12	True	AATAAA	-14	NA	101442681	101379590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.45	chr11	-	4919	14	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-571	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	96.1975900496522	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTGACAAAGAATGACT	9025	False	NA	-13	True	AATAAA	-13	NA	101416603	101379591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382754_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150
ES.6408.47	chr11	-	6626	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_19	76.1370149225875	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTGACAAAGAATGACT	NA	False	NA	-13	True	AATAAA	-13	NA	101442696	101379591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426288_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.49	chr11	-	6463	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	28	-3	intron_retention	FALSE	canonical	0	0	junction_19	77.881560172906	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTGACAAAGAATGAC	NA	False	NA	-14	True	AATAAA	-12	NA	101442677	101379592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101430806_101430861_101439840_101439940_101442594
ES.6408.50	chr11	-	3890	14	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-9637	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	94.6785280231957	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTGACAAAGAATGAC	NA	False	NA	-14	True	AATAAA	-12	NA	101425669	101379592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399246_101418301_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764
ES.6408.51	chr11	-	6547	23	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	20	-3	intron_retention	FALSE	canonical	0	0	junction_15	76.1808418249433	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTGACAAAGAATGAC	NA	False	NA	-14	True	AATAAA	-12	NA	101442685	101379592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418898_101420612_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.55	chr11	-	5924	12	ISM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	30897	5	1477	-5	3prime_fragment	FALSE	canonical	3	266	junction_5	40.5283290371742	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTTGACAAAGAATG	5613	False	NA	-16	True	AATAAA	-10	NA	101411808	101379594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096
ES.6408.56	chr11	-	9673	8	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-3845	-5	intron_retention	FALSE	canonical	3	315	junction_4	24.738633753706	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTTGACAAAGAATG	NA	False	NA	-16	True	AATAAA	-10	NA	101402849	101379594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101392859_101393306_101393385_101396142_101396231_101398775
ES.6408.57	chr11	-	6437	24	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	-5	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	74.5096636759045	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTTGACAAAGAATG	NA	False	NA	-16	True	AATAAA	-10	NA	101442710	101379594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101415237_101415371_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.60	chr11	-	6006	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	-7	573	-7	-573	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAGATGGCTTGAGAT	NA	False	NA	NA	False	TATAAA	-35	NA	101442712	101380162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.62	chr11	-	5702	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	17	853	17	-853	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTGAAGTCTGTCTTG	NA	False	NA	NA	False	NA	NA	NA	101442688	101380442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.64	chr11	-	2677	9	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	16	-2189	intron_retention	FALSE	canonical	2	5	junction_4	131.494712346162	329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAATGCCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	101442689	101418521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101423745_101423837_101424764_101426432_101430806_101430861_101439840_101439940_101442594
ES.6408.7	chr11	-	6284	21	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	20	10	intron_retention	FALSE	canonical	1	3	junction_9	101.242913332243	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGATTGGGGGCCT	NA	False	NA	-1	True	AATAAA	-25	NA	101442685	101379579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101442594
ES.6408.9	chr11	-	5918	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	17	10	intron_retention	FALSE	non_canonical	0	0	junction_14	74.5096636759045	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTGATTGGGGGCCT	NA	False	NA	-1	True	AATAAA	-25	NA	101442688	101379579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101415496_101416142_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ES.6409.1	chr11	+	4756	22	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	-83	2	intron_retention	TRUE	non_canonical	0	0	junction_6	72.515007438839	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGTTTATTGTTTAAAA	186	False	NA	23	True	AATAAA	-26	NA	101442891	101472779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101455438_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.10	chr11	+	3274	22	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	161	6	intron_retention	FALSE	canonical	0	0	junction_6	72.515007438839	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTCTCTGCTGTC	515	False	NA	NA	False	ATTAAA	-18	NA	101443220	101471620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451300_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.100	chr11	+	7464	23	NNC	ENSMUSG00000017119.21	novel	4344	23	NA	NA	15	-5	intron_retention	FALSE	non_canonical	0	0	junction_22	58.838692503634	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	1036	False	NA	16	True	AATAAA	-19	NA	101443741	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101470069_101470218
ES.6409.101	chr11	+	4240	24	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	1086	-5	combination_of_known_junctions	FALSE	canonical	3	13	junction_19	56.8994735873537	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	2107	False	NA	16	True	AATAAA	-19	NA	101444812	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.102	chr11	+	6157	18	NIC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	830	0	intron_retention	FALSE	canonical	3	41	junction_17	59.6378923226839	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGAGGTGGTCTCTCT	5122	False	NA	NA	False	ATTAAA	-12	NA	101447827	101471614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.103	chr11	+	6064	16	NIC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	464	-9	intron_retention	FALSE	canonical	3	41	junction_15	62.2965666969073	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAACCAAGCTGTTT	2363	False	NA	12	True	AATAAA	-15	NA	101450808	101472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.104	chr11	+	3990	18	NNC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	912	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	67.8026854353803	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	2811	False	NA	16	True	AATAAA	-19	NA	101451256	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.105	chr11	+	5425	17	ISM	ENSMUSG00000017119.21	ENSMUST00000123558.8	4392	23	7924	8	-1004	-8	3prime_fragment	FALSE	canonical	3	12	junction_15	66.9409429553394	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	3162	False	NA	13	True	AATAAA	-16	NA	101451607	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.106	chr11	+	4405	16	NIC	ENSMUSG00000017119.21	novel	3239	21	NA	NA	-95	-8	intron_retention	FALSE	canonical	3	12	junction_14	68.4883120604449	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	4071	False	NA	13	True	AATAAA	-16	NA	101452516	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.107	chr11	+	7604	13	NNC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	-1965	-8	intron_retention	FALSE	non_canonical	0	0	junction_4	71.2376694983459	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	6448	False	NA	13	True	AATAAA	-16	NA	101454893	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101455653_101456529_101456608_101457021_101457237_101457920_101458160_101458380_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463799_101463928_101464004_101465824_101466243_101467128_101468864_101471410
ES.6409.108	chr11	+	3450	13	NIC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	162	-11	intron_retention	FALSE	canonical	3	41	junction_12	69.32466892977	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGCCAACCAAGCTGT	8575	False	NA	10	True	AATAAA	-13	NA	101457020	101472766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.109	chr11	+	5842	11	NIC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	176	-5	intron_retention	FALSE	canonical	3	199	junction_5	29.3054602420778	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	8589	False	NA	16	True	AATAAA	-19	NA	101457034	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463799_101463928_101464004_101465824_101466243_101467128_101468864_101471410
ES.6409.11	chr11	+	4314	22	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	168	-5	intron_retention	FALSE	canonical	3	23	junction_1	66.5536456935459	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	522	False	NA	16	True	AATAAA	-19	NA	101443227	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.110	chr11	+	3569	14	NNC	ENSMUSG00000017119.21	novel	3353	21	NA	NA	178	-5	intron_retention	FALSE	canonical	3	13	junction_8	81.5641468978349	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	8591	False	NA	16	True	AATAAA	-19	NA	101457036	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.111	chr11	+	7127	9	NIC	ENSMUSG00000017119.21	novel	3330	15	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	199	junction_4	30.0850357320712	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	9493	False	NA	16	True	AATAAA	-19	NA	101457938	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101463799_101463928_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.114	chr11	+	186	1	Intergenic	novelGene_5162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	9729	False	NA	NA	False	NA	NA	NA	101458174	101458360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101458200_101458400
ES.6409.115	chr11	+	176	1	Genic_Genomic	ENSMUSG00000017119.21	novel	NA	NA	NA	NA	-164	-141	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	101458955	101459131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_101459000_101459100
ES.6409.116	chr11	+	3649	11	NNC	ENSMUSG00000017119.21	novel	3330	15	NA	NA	661	-37	intron_retention	FALSE	canonical	0	0	junction_4	97.176180208938	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTTCTAAATAAACCACAA	41	False	NA	-16	True	NA	NA	NA	101460173	101472740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101460242_101460323_101460615_101462109_101462260_101462727_101462800_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.117	chr11	+	2671	11	NNC	ENSMUSG00000017119.21	novel	3330	15	NA	NA	1052	-5	intron_retention	FALSE	non_canonical	0	0	junction_10	81.2307823426563	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	334	False	NA	16	True	AATAAA	-19	NA	101460564	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471417
ES.6409.119	chr11	+	1633	4	ISM	ENSMUSG00000017119.21	ENSMUST00000149019.2	3330	15	9182	7	1194	-7	3prime_fragment	FALSE	canonical	3	215	junction_2	22.3059533657621	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	1638	False	NA	14	True	AATAAA	-17	NA	101467126	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.14	chr11	+	3011	19	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	181	437	intron_retention	FALSE	canonical	3	23	junction_1	55.7713586390402	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTATGTTTTGATTC	535	False	NA	NA	False	TATAAA	-30	NA	101443240	101466479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824
ES.6409.15	chr11	+	4401	22	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	190	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	78.1660828488706	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	544	False	NA	16	True	AATAAA	-19	NA	101443249	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.16	chr11	+	4409	23	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	195	-7	intron_retention	FALSE	canonical	0	0	junction_16	67.2962489591132	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	549	False	NA	14	True	AATAAA	-17	NA	101443254	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.17	chr11	+	4501	24	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	-206	-7	intron_retention	FALSE	canonical	3	13	junction_17	65.7933696189996	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	568	False	NA	14	True	AATAAA	-17	NA	101443273	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.18	chr11	+	4566	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	-227	0	-23	0	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	751	False	NA	21	True	AATAAA	-24	NA	101443456	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.19	chr11	+	4504	25	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	42	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	55.70358057512	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	816	False	NA	21	True	AATAAA	-24	NA	101443521	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.2	chr11	+	4853	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103099.8	4789	24	-64	0	-64	0	multi-exon	FALSE	canonical	3	23	junction_1	55.4078195296328	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	205	False	NA	21	True	AATAAA	-24	NA	101442910	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.20	chr11	+	4580	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	74	0	74	0	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	848	False	NA	21	True	AATAAA	-24	NA	101443553	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.22	chr11	+	4372	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107208.8	4344	23	-31	3	-31	-3	multi-exon	FALSE	canonical	3	41	junction_22	52.5711049377904	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAAGCTGTTTATTGTT	947	False	NA	18	True	AATAAA	-21	NA	101443652	101472774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.23	chr11	+	4162	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-24	-3	intron_retention	FALSE	canonical	1	1	junction_7	60.6008838234345	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAAGCTGTTTATTGTT	954	False	NA	18	True	AATAAA	-21	NA	101443659	101472774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.24	chr11	+	4356	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-22	2	intron_retention	FALSE	canonical	0	0	junction_14	59.4838682208243	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGTTTATTGTTTAAAA	956	False	NA	23	True	AATAAA	-26	NA	101443661	101472779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460608_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.26	chr11	+	4349	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-21	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	74.4249610677223	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	957	False	NA	14	True	AATAAA	-17	NA	101443662	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468021_101468078_101468757_101468864_101471410
ES.6409.27	chr11	+	4408	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_4	69.9590789481446	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	975	False	NA	21	True	AATAAA	-24	NA	101443680	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.28	chr11	+	4502	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	-3	-160	-3	160	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTGAAACTCGTACC	975	False	NA	NA	False	NA	NA	NA	101443680	101472937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.29	chr11	+	4233	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	41	junction_21	53.0816766793681	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAAGCTGTTTATTGTT	975	False	NA	18	True	AATAAA	-21	NA	101443680	101472774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.3	chr11	+	4678	23	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	4	4	intron_retention	FALSE	canonical	3	23	junction_1	55.8982251082084	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTATTGTTTAAAATG	273	False	NA	25	True	AATAAA	-28	NA	101442978	101472781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.30	chr11	+	4466	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	13	junction_17	52.9065945839702	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	975	False	NA	16	True	AATAAA	-19	NA	101443680	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.31	chr11	+	4334	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	70.6366404328845	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	976	False	NA	14	True	AATAAA	-17	NA	101443681	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455438_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.32	chr11	+	4394	23	FSM	ENSMUSG00000017119.21	ENSMUST00000123558.8	4392	23	-2	0	-2	0	multi-exon	FALSE	canonical	3	12	junction_21	57.5707434020768	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	976	False	NA	21	True	AATAAA	-24	NA	101443681	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.33	chr11	+	4327	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-2	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	60.7081789645949	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	976	False	NA	14	True	AATAAA	-17	NA	101443681	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101453110_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.34	chr11	+	4339	22	NNC	ENSMUSG00000017119.21	novel	4344	23	NA	NA	-2	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	68.9987018840065	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	976	False	NA	16	True	AATAAA	-19	NA	101443681	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.35	chr11	+	4222	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-2	-8	intron_retention	FALSE	canonical	0	0	junction_1	60.8927908113031	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	976	False	NA	13	True	AATAAA	-16	NA	101443681	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.36	chr11	+	4283	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-2	0	intron_retention	FALSE	canonical	3	12	junction_20	58.2924832670746	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	976	False	NA	21	True	AATAAA	-24	NA	101443681	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.37	chr11	+	4337	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-1	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	60.561357353804	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	977	False	NA	16	True	AATAAA	-19	NA	101443682	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451293_101455444_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.38	chr11	+	4014	18	NIC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	-1	-8	intron_retention	FALSE	canonical	0	0	junction_17	80.4422034561822	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	977	False	NA	13	True	AATAAA	-16	NA	101443682	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101471410
ES.6409.39	chr11	+	3180	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	-1	1160	-1	3	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGGTGGTCTCTCTGCT	977	False	NA	NA	False	ATTAAA	-15	NA	101443682	101471617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.40	chr11	+	4220	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	83.3062779771922	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	977	False	NA	16	True	AATAAA	-19	NA	101443682	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459229_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.41	chr11	+	4436	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-1	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	59.9360540785961	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	977	False	NA	13	True	AATAAA	-16	NA	101443682	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101453110_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.42	chr11	+	3138	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-1	6	intron_retention	FALSE	canonical	0	0	junction_1	74.0730179179374	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTCTCTGCTGTC	977	False	NA	NA	False	ATTAAA	-18	NA	101443682	101471620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444698_101444765_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.43	chr11	+	4452	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-1	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	59.7430448249725	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	977	False	NA	16	True	AATAAA	-19	NA	101443682	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101455425_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.44	chr11	+	4449	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	59.7430448249725	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	977	False	NA	21	True	AATAAA	-24	NA	101443682	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.46	chr11	+	4352	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_2	75.15737079946	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	980	False	NA	21	True	AATAAA	-24	NA	101443685	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446617_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455438_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.48	chr11	+	4353	25	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_17	65.6162957190429	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGCTGTTTATTGT	981	False	NA	17	True	AATAAA	-20	NA	101443686	101472773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.49	chr11	+	3863	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	0	370	intron_retention	FALSE	non_canonical	0	0	junction_5	59.9360540785961	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCCTGGGTAGTGTGAA	987	False	NA	NA	False	CATAAA	-13	NA	101443692	101472208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450413_101453117_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.5	chr11	+	4657	25	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	17	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	67.1229049952399	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	286	False	NA	14	True	AATAAA	-17	NA	101442991	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.50	chr11	+	3868	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	213	573	0	366	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAATCCTGGGTAGTG	987	False	NA	NA	False	CATAAA	-9	NA	101443692	101472204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.52	chr11	+	4438	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	0	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	59.7430448249725	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	987	False	NA	16	True	AATAAA	-19	NA	101443692	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451293_101455444_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.53	chr11	+	4145	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_15	71.6150898095881	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	987	False	NA	16	True	AATAAA	-19	NA	101443692	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.54	chr11	+	5151	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	-9	intron_retention	FALSE	canonical	3	199	junction_14	25.6486817455293	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAACCAAGCTGTTT	987	False	NA	12	True	AATAAA	-15	NA	101443692	101472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.55	chr11	+	2734	16	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	1	327	intron_retention	FALSE	non_canonical	0	0	junction_4	64.6269981423313	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTGAGATTTAAACAA	988	False	NA	NA	False	AATAAA	-28	NA	101443693	101466369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447122_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824
ES.6409.56	chr11	+	4699	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	1	-7	intron_retention	FALSE	canonical	1	1	junction_23	57.4126442539171	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	988	False	NA	14	True	AATAAA	-17	NA	101443693	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471144
ES.6409.57	chr11	+	4425	22	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	1	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	61.1461206665015	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	988	False	NA	16	True	AATAAA	-19	NA	101443693	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450413_101455427_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.58	chr11	+	3280	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	215	1159	2	4	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGTGGTCTCTCTGCTG	989	False	NA	NA	False	ATTAAA	-16	NA	101443694	101471618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.59	chr11	+	6723	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_22	58.2989056217543	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCTGTTTATTGTTT	989	False	NA	19	True	AATAAA	-22	NA	101443694	101472775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101470069_101470218
ES.6409.6	chr11	+	4733	23	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	-39	-8	intron_retention	FALSE	non_canonical	0	0	junction_6	71.0498748115984	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	315	False	NA	13	True	AATAAA	-16	NA	101443020	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.60	chr11	+	4291	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_12	58.681125416536	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459307_101460094_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.62	chr11	+	5114	23	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-5	intron_retention	FALSE	canonical	3	112	junction_17	39.2079642778086	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	989	False	NA	16	True	AATAAA	-19	NA	101443694	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.63	chr11	+	4587	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-7	intron_retention	FALSE	canonical	1	1	junction_22	58.1355640004713	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471144
ES.6409.65	chr11	+	4339	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-7	intron_retention	FALSE	canonical	0	0	junction_16	53.6890534728441	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.67	chr11	+	3761	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	11	567	2	372	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGGGTAGTGTGAAAT	989	False	NA	NA	False	CATAAA	-15	NA	101443694	101472210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.68	chr11	+	4277	21	NNC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	2	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	85.1513945863484	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAAGCTGTTTATTGTTT	989	False	NA	19	True	AATAAA	-22	NA	101443694	101472775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444807_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101471410
ES.6409.69	chr11	+	4267	22	NIC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	2	-8	intron_retention	FALSE	canonical	0	0	junction_21	59.3369256727994	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	989	False	NA	13	True	AATAAA	-16	NA	101443694	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101471410
ES.6409.7	chr11	+	7964	22	ISM	ENSMUSG00000017119.21	ENSMUST00000103099.8	4789	24	47	5	-38	-5	intron_retention	FALSE	canonical	3	23	junction_1	56.5478947361701	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	316	False	NA	16	True	AATAAA	-19	NA	101443021	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019
ES.6409.70	chr11	+	7488	20	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	76.575963045485	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.72	chr11	+	5044	21	NIC	ENSMUSG00000017119.21	novel	4344	23	NA	NA	2	-8	intron_retention	FALSE	canonical	3	41	junction_20	47.2777696174428	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	989	False	NA	13	True	AATAAA	-16	NA	101443694	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.73	chr11	+	9123	21	NIC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	2	-7	intron_retention	FALSE	canonical	3	112	junction_16	40.2058453461683	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101468864_101471410
ES.6409.75	chr11	+	4322	23	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_3	60.0177831773272	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	989	False	NA	21	True	AATAAA	-24	NA	101443694	101472777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.76	chr11	+	6382	21	NIC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	2	-5	intron_retention	FALSE	canonical	3	112	junction_16	35.8084836316759	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	989	False	NA	16	True	AATAAA	-19	NA	101443694	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101468864_101471410
ES.6409.77	chr11	+	4386	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-8	intron_retention	FALSE	canonical	0	0	junction_1	72.6584052696775	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	989	False	NA	13	True	AATAAA	-16	NA	101443694	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444698_101444765_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.78	chr11	+	4211	21	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-6	intron_retention	FALSE	non_canonical	0	0	junction_6	70.5672728678103	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	989	False	NA	15	True	AATAAA	-18	NA	101443694	101472771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455440_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ES.6409.79	chr11	+	4213	24	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_19	56.2099763091301	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.8	chr11	+	5411	23	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	-36	-9	intron_retention	FALSE	canonical	3	23	junction_1	56.6459389249946	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAACCAAGCTGTTT	318	False	NA	12	True	AATAAA	-15	NA	101443023	101472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.80	chr11	+	4367	23	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-6	intron_retention	FALSE	canonical	0	0	junction_2	60.1237188657516	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	989	False	NA	15	True	AATAAA	-18	NA	101443694	101472771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.82	chr11	+	5001	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-7	intron_retention	FALSE	canonical	3	94	junction_16	38.355007182423	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	989	False	NA	14	True	AATAAA	-17	NA	101443694	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.83	chr11	+	4410	22	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-9	intron_retention	FALSE	non_canonical	0	0	junction_5	61.1461206665015	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAACCAAGCTGTTT	989	False	NA	12	True	AATAAA	-15	NA	101443694	101472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450413_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.84	chr11	+	4471	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_2	68.5776642227318	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGCTGTTTATTGT	989	False	NA	17	True	AATAAA	-20	NA	101443694	101472773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446617_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.86	chr11	+	4156	21	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-8	intron_retention	FALSE	canonical	0	0	junction_20	60.311586780651	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAACCAAGCTGTTTA	989	False	NA	13	True	AATAAA	-16	NA	101443694	101472769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101471410
ES.6409.88	chr11	+	4157	20	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-9	intron_retention	FALSE	non_canonical	0	0	junction_6	76.3512077521224	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAACCAAGCTGTTT	989	False	NA	12	True	AATAAA	-15	NA	101443694	101472768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451300_101455451_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101471410
ES.6409.89	chr11	+	7400	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-5	intron_retention	FALSE	non_canonical	0	0	junction_21	59.6590083634615	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	989	False	NA	16	True	AATAAA	-19	NA	101443694	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101470069_101470218
ES.6409.9	chr11	+	4816	24	NNC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	148	-6	intron_retention	FALSE	canonical	1	1	junction_23	68.6175395192704	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAACCAAGCTGTTTATT	502	False	NA	15	True	AATAAA	-18	NA	101443207	101472771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471144
ES.6409.90	chr11	+	5837	21	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	2	-1	intron_retention	FALSE	canonical	3	199	junction_14	26.1139809297625	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCTGTTTATTGTTTA	989	False	NA	20	True	AATAAA	-23	NA	101443694	101472776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468864_101471410
ES.6409.91	chr11	+	4433	23	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_6	59.7430448249725	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCAAGCTGTTTATTG	989	False	NA	16	True	AATAAA	-19	NA	101443694	101472772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451300_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.92	chr11	+	4371	22	NNC	ENSMUSG00000017119.21	novel	4392	23	NA	NA	3	-7	intron_retention	FALSE	non_canonical	0	0	junction_6	72.947221003642	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	990	False	NA	14	True	AATAAA	-17	NA	101443695	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451282_101455437_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.6409.96	chr11	+	4281	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	58.7314544593538	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	999	False	NA	14	True	AATAAA	-17	NA	101443704	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465965_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.97	chr11	+	4398	22	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	0	-7	intron_retention	FALSE	canonical	0	0	junction_5	61.1461206665015	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	1002	False	NA	14	True	AATAAA	-17	NA	101443707	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450429_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.98	chr11	+	4287	23	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-7	-7	intron_retention	FALSE	non_canonical	0	0	junction_8	59.5033855554622	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	1014	False	NA	14	True	AATAAA	-17	NA	101443719	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455641_101456526_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ES.6409.99	chr11	+	4353	22	NNC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	-7	-7	intron_retention	FALSE	canonical	0	0	junction_1	73.5789948336183	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAACCAAGCTGTTTAT	1014	False	NA	14	True	AATAAA	-17	NA	101443719	101472770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101443782_101444698_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ES.641.1	chr1	-	3648	1	ISM	ENSMUSG00000025959.14	ENSMUST00000114086.8	7662	4	88383	14	88374	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTTGGAATGGTTCA	6714	False	NA	-19	True	AATAAA	-13	NA	64072267	64068619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_64068600_64072300
ES.641.10	chr1	-	3452	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTACCTTTTAAGACTA	NA	False	NA	NA	False	NA	NA	NA	64156767	64153315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64153300_64156800
ES.641.2	chr1	-	3432	4	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-24	-3380	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.94392028877595	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATCATTGCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	64160674	64071985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64074924_64081472_64081597_64160058_64160299_64160544
ES.641.3	chr1	-	4036	5	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-32	-3387	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	5.02493781056044	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGAGTAATCATTGC	NA	False	NA	NA	False	NA	NA	NA	64161473	64071992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161360
ES.641.5	chr1	-	3807	4	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-43	-3387	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.24264068711928	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGAGTAATCATTGC	NA	False	NA	NA	False	NA	NA	NA	64161484	64071992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64161360
ES.641.6	chr1	-	4209	5	NNC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-2	-3391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.70087712549569	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGCAAAAGAGTAATCA	NA	False	NA	NA	False	NA	NA	NA	64161443	64071996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161153
ES.641.7	chr1	-	3976	5	NNC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-26	-3429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5.70087712549569	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	64161467	64072034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161372
ES.641.8	chr1	-	2057	5	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	-2	-5336	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	5.02493781056044	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCCTTGAGCCTCACCT	NA	False	NA	-36	True	AATAAA	-24	NA	64161443	64073941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161360
ES.6410.1	chr11	+	2221	8	NIC	ENSMUSG00000034947.14	novel	2304	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.57462633149488	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAAAGGGGCATTCCTG	3705	False	NA	NA	False	AATAAA	-15	NA	101473084	101482612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101473152_101473450_101473531_101474383_101474611_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ES.6410.2	chr11	+	2188	8	NNC	ENSMUSG00000034947.14	novel	2428	9	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1921984490291	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGGAAAAGGGGCATTCC	3793	False	NA	NA	False	AATAAA	-13	NA	101473172	101482610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101473531_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158_101482040_101482118
ES.6410.3	chr11	+	181	1	Intergenic	novelGene_5163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATAAGTTTTGAGCCG	9700	False	NA	NA	False	NA	NA	NA	101479079	101479260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101479100_101479300
ES.6410.4	chr11	+	2518	1	Genic_Genomic	ENSMUSG00000034947.14	novel	NA	NA	NA	NA	5470	2196	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101482292	101484810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_101482300_101484800
ES.6411.1	chr11	-	3394	1	Antisense	novelGene_ENSMUSG00000034947.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGTGGCTAAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	101477134	101473740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_101473700_101477100
ES.6412.1	chr11	+	214	1	Intergenic	novelGene_5164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTTTAAAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	101496422	101496636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101496400_101496600
ES.6413.1	chr11	+	2363	14	Fusion	ENSMUSG00000086617.2_ENSMUSG00000010362.10	novel	985	7	NA	NA	12	-11	multi-exon	TRUE	canonical	0	0	junction_2	512.549561754215	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTAAATAGTGTGTG	NA	False	NA	18	True	AATAAA	-17	NA	101501451	101526915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_101501538_101501917_101502004_101514654_101514753_101515446_101515633_101515776_101515989_101516223_101516364_101517739_101517940_101518052_101518147_101519098_101519279_101521063_101521187_101521645_101521806_101524356_101524727_101525613_101525700_101526573
ES.6413.10	chr11	+	1107	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	417.624798380343	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGTGTGGTTTGGGT	NA	False	NA	26	True	AATAAA	-25	NA	101518775	101526923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519098_101519279_101521063_101521187_101521651_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.11	chr11	+	1917	6	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	8	-3	intron_retention	FALSE	canonical	2	4	junction_1	460.974012282688	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGTGTGGTTTGGGT	NA	False	NA	26	True	AATAAA	-25	NA	101518775	101526923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519168_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613
ES.6413.12	chr11	+	3169	2	ISM	ENSMUSG00000010362.10	ENSMUST00000139037.2	795	4	-22	929	8	-929	intron_retention	FALSE	canonical	3	866	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCCCCTTCATGTGCT	NA	False	NA	NA	False	NA	NA	NA	101518775	101523729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101519279_101521063
ES.6413.13	chr11	+	1198	8	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	513.123448567095	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGTGTGGTTTGGGT	NA	False	NA	26	True	AATAAA	-25	NA	101518776	101526923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526128_101526215_101526573
ES.6413.15	chr11	+	1431	7	FSM	ENSMUSG00000010362.10	ENSMUST00000133727.8	985	7	-437	-9	10	9	multi-exon	FALSE	canonical	1	1	junction_3	529.496117916731	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518777	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101519279_101521063_101521187_101521645_101521806_101523840_101523969_101524627_101524727_101525613_101525700_101526573
ES.6413.16	chr11	+	1952	6	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	11	9	intron_retention	FALSE	canonical	3	9	junction_1	459.053199531383	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518778	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519114_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613
ES.6413.17	chr11	+	1383	6	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	11	9	intron_retention	FALSE	canonical	3	6	junction_3	454.674125061016	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518778	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524546_101524727_101525613_101525700_101526573
ES.6413.19	chr11	+	2176	5	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	11	9	intron_retention	FALSE	canonical	3	866	junction_1	143.28817117962	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518778	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613
ES.6413.2	chr11	+	974	7	Fusion	ENSMUSG00000086617.2_ENSMUSG00000010362.10	novel	463	3	NA	NA	12	9	multi-exon	FALSE	canonical	0	0	junction_2	557.196180293201	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101501451	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_101501538_101501917_101502004_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.20	chr11	+	1761	5	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	11	9	intron_retention	FALSE	canonical	3	866	junction_1	145.431255237655	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518778	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101519279_101521063_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.22	chr11	+	1965	6	ISM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	14	19	14	9	intron_retention	FALSE	canonical	3	866	junction_2	128.490622225904	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518781	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613
ES.6413.23	chr11	+	1172	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	9	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	425.534728965281	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518781	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524546_101524727_101525613_101525700_101526573
ES.6413.25	chr11	+	1065	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	10	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	434.826945142803	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGTGTCTTGTAAATA	NA	False	NA	11	True	AATAAA	-10	NA	101518781	101526908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519125_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.26	chr11	+	1085	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	436.975749390691	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518781	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519104_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.27	chr11	+	1075	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	9	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	433.752873829737	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518781	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101518891_101519114_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.28	chr11	+	3268	4	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	9	intron_retention	FALSE	non_canonical	0	0	junction_2	497.333109919521	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518781	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101519279_101521063_101522330_101524515_101524727_101525613
ES.6413.3	chr11	+	759	5	NNC	ENSMUSG00000086617.2	novel	472	3	NA	NA	-36	681	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	9.83298021964857	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATGCCTGTGGGGTTT	NA	False	NA	6	True	AAAACA	-26	NA	101501489	101507463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101501538_101501917_101502004_101506606_101506824_101507017_101507086_101507123
ES.6413.30	chr11	+	4584	4	NIC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	14	13	intron_retention	FALSE	canonical	3	866	junction_1	149.577924693303	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGTCTTGTAAATAGTG	NA	False	NA	14	True	AATAAA	-13	NA	101518781	101526911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_101519279_101521063_101524727_101525613_101525700_101526573
ES.6413.33	chr11	+	2697	3	ISM	ENSMUSG00000010362.10	ENSMUST00000139037.2	795	4	-9	929	-9	-929	5prime_fragment	FALSE	canonical	3	866	junction_1	153.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGCCCCTTCATGTGCT	NA	False	NA	NA	False	NA	NA	NA	101518788	101523729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101519279_101521063_101521187_101521645
ES.6413.35	chr11	+	1065	7	NNC	ENSMUSG00000010362.10	novel	985	7	NA	NA	131	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	436.975749390691	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101518928	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101519012_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.36	chr11	+	4429	2	ISM	ENSMUSG00000010362.10	ENSMUST00000155222.2	463	3	-2965	-127	2383	-13	intron_retention	FALSE	canonical	3	1175	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGTAAATAGTGTG	NA	False	NA	16	True	AATAAA	-15	NA	101521597	101526913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101524727_101525613
ES.6413.37	chr11	+	2013	4	NNC	ENSMUSG00000010362.10	novel	463	3	NA	NA	-1992	9	intron_retention	FALSE	canonical	0	0	junction_1	557.709801081371	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGTGTCTTGTAAAT	NA	False	NA	10	True	AATAAA	-9	NA	101522570	101526907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101523116_101523678_101524727_101525613_101525700_101526573
ES.6413.4	chr11	+	179	2	Intergenic	novelGene_5166	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGGCTCATTA	NA	False	NA	NA	False	NA	NA	NA	101511886	101512217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101511968_101512119
ES.6413.5	chr11	+	340	2	Intergenic	novelGene_5167	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101511887	101512379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101511968_101512119
ES.6413.6	chr11	+	2055	6	Fusion	ENSMUSG00000010362.10_ENSMUSG00000119776.1	novel	1124	7	NA	NA	13	-11	intron_retention	FALSE	canonical	3	866	junction_1	132.095420056866	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTAAATAGTGTGTG	NA	False	NA	18	True	AATAAA	-17	NA	101518033	101526915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6413.8	chr11	+	2640	2	NNC	ENSMUSG00000010362.10	novel	795	4	NA	NA	-15	-946	intron_retention	FALSE	non_canonical	0	0	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGCAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	101518752	101523712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101520086_101522405
ES.6413.9	chr11	+	1128	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	-7	3	-7	-3	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGTGTGGTTTGGGT	NA	False	NA	26	True	AATAAA	-25	NA	101518760	101526923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ES.6414.1	chr11	-	3403	2	Intergenic	novelGene_5165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATAGTATTATCTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	101514606	101510261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101511393_101512334
ES.6415.1	chr11	+	172	1	Intergenic	novelGene_5168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	101527652	101527824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101527700_101527800
ES.6415.2	chr11	+	357	1	Intergenic	novelGene_5169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTTTTATGTGTG	NA	False	NA	NA	False	AAAACA	-26	NA	101527653	101528010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101527700_101528000
ES.6416.1	chr11	-	445	1	Intergenic	novelGene_5170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101529420	101528975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101529000_101529400
ES.6417.1	chr11	+	170	1	Intergenic	novelGene_5171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATTTTATATAT	NA	False	NA	NA	False	NA	NA	NA	101535179	101535349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101535200_101535300
ES.6418.1	chr11	+	1569	3	NNC	ENSMUSG00000034936.3	novel	1382	2	NA	NA	-7448	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	NA	False	NA	NA	False	ATTAAA	-18	NA	101548918	101558658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101549019_101556279_101556464_101557373
ES.6418.2	chr11	+	98	1	FSM	ENSMUSG00000118837.1	ENSMUST00000240231.1	191	1	0	93	0	-93	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGGAAGTAGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	101549063	101549161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101549100_101549200
ES.6418.3	chr11	+	1540	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	-160	2	-160	-2	multi-exon	FALSE	canonical	3	45	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTTGATCTGGTAA	2390	False	NA	NA	False	ATTAAA	-16	NA	101556206	101558656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101556464_101557373
ES.6419.1	chr11	-	157	1	Intergenic	novelGene_5172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAACAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101567260	101567103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101567100_101567300
ES.642.1	chr1	+	6746	7	FSM	ENSMUSG00000025958.15	ENSMUST00000171164.8	1287	7	-59	-5400	-59	-1577	multi-exon	FALSE	canonical	2	7	junction_1	32.4572368235841	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTCTCTTTTTTGGGC	NA	False	NA	10	True	CATAAA	-19	NA	64571896	64642130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.10	chr1	+	6859	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-106	-5493	-9	-1578	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571946	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.11	chr1	+	5599	10	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-9	-1580	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	41.0855776563751	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAAAGTCTCTTTTTTG	NA	False	NA	7	True	CATAAA	-16	NA	64571946	64642127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.12	chr1	+	5334	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	-28	3058	-6	233	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGGTGGCTTGTGTG	NA	False	NA	16	True	AATAAA	-33	NA	64571949	64640649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.13	chr1	+	5361	10	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-1	1603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.1663449151458	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571954	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613353_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.14	chr1	+	6842	9	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-1	1633	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	36.9879625689223	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGGTATCAACTGTC	NA	False	NA	42	True	NA	NA	NA	64571954	64642049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.15	chr1	+	5358	8	NNC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	-1	-1578	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	39.0274628581318	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571954	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.16	chr1	+	6573	8	FSM	ENSMUSG00000025958.15	ENSMUST00000185594.7	1569	8	161	-5165	2	1603	multi-exon	FALSE	canonical	1	3	junction_1	31.6169678030836	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571964	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572064_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.17	chr1	+	6643	7	NIC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	-2	-1586	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.101835976041	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCTGTAAAGTCTCT	NA	False	NA	1	True	CATAAA	-10	NA	64571965	64642121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.18	chr1	+	5352	9	NNC	ENSMUSG00000025958.15	novel	1260	9	NA	NA	-5	1603	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	30.6624770688867	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571972	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.19	chr1	+	6167	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	-2	2199	-2	1092	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTGTAGATT	NA	False	NA	NA	False	AATAAA	-36	NA	64571975	64641508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.2	chr1	+	6782	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-139	-5383	-42	1603	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571913	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.20	chr1	+	6943	10	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-2	-1578	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	37.357465745331	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571975	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.21	chr1	+	6495	7	NIC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	-2	1603	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	32.5717157464366	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571975	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64615337_64615489_64636392
ES.642.22	chr1	+	1745	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	4	6615	4	238	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTAGTGTGGTGTTGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	64571981	64637092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.23	chr1	+	5971	7	NIC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	-6	1088	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	32.5717157464366	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTCTGTGTGTGTA	NA	False	NA	NA	False	AATAAA	-32	NA	64571984	64641504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64615337_64615489_64636392
ES.642.24	chr1	+	6594	7	NIC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	-5	-1579	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	32.5717157464366	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAAAGTCTCTTTTTTGG	NA	False	NA	8	True	CATAAA	-17	NA	64571985	64642128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64615337_64615489_64636392
ES.642.25	chr1	+	5509	10	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-4	-1581	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	40.5557077622715	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAAAGTCTCTTTTTT	NA	False	NA	6	True	CATAAA	-15	NA	64571986	64642126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392_64636803_64638131
ES.642.26	chr1	+	6882	10	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-3	-1578	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	38.6401569406112	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571987	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
ES.642.27	chr1	+	1616	8	FSM	ENSMUSG00000025958.15	ENSMUST00000185594.7	1569	8	184	-231	-3	231	multi-exon	FALSE	canonical	1	3	junction_1	31.6169678030836	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGGATATTAGTGTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	64571987	64637085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572064_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.28	chr1	+	6817	10	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-2	1600	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	37.357465745331	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGTCTTAAAGTGCT	NA	False	NA	9	True	ATTAAA	-21	NA	64571988	64642016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.3	chr1	+	6722	8	FSM	ENSMUSG00000025958.15	ENSMUST00000185594.7	1569	8	120	-5273	-32	-1580	multi-exon	FALSE	canonical	1	3	junction_1	31.6169678030836	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAAAGTCTCTTTTTTG	NA	False	NA	7	True	CATAAA	-16	NA	64571923	64642127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572064_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.30	chr1	+	7119	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	15	1230	2	-1230	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACTGTATAAAATGC	NA	False	NA	NA	False	AATAAA	-26	NA	64571992	64642477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.31	chr1	+	5424	9	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	3	-1586	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	43.8997437350151	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTCTGTAAAGTCTCT	NA	False	NA	1	True	CATAAA	-10	NA	64571993	64642121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.32	chr1	+	1548	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-59	-229	3	11	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTTTAGGTTTGTT	NA	False	NA	NA	False	AATGAA	-15	NA	64571993	64636865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.33	chr1	+	6511	7	NNC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	7	1600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	40.6383097854995	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGTCTTAAAGTGCT	NA	False	NA	9	True	ATTAAA	-21	NA	64571997	64642016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615469_64636392
ES.642.34	chr1	+	4982	6	NNC	ENSMUSG00000025958.15	novel	8364	8	NA	NA	9	225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.5851993378969	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTAGAGTTTTGGGTGG	NA	False	NA	8	True	AATAAA	-25	NA	64571999	64640641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64605375_64605477_64609292_64609431_64613231_64613415_64615337_64615469_64636392
ES.642.35	chr1	+	7052	8	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	11	-1230	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	41.123507354588	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACTGTATAAAATGC	NA	False	NA	NA	False	AATAAA	-26	NA	64572001	64642477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
ES.642.36	chr1	+	5426	9	NNC	ENSMUSG00000025958.15	novel	1260	9	NA	NA	-9	-1578	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	30.6624770688867	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64572008	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.37	chr1	+	1766	2	NNC	ENSMUSG00000025958.15	novel	1288	7	NA	NA	-9	-24198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCATTGTGTTTGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	64572008	64573900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572454_64572579
ES.642.38	chr1	+	6517	7	FSM	ENSMUSG00000025958.15	ENSMUST00000171164.8	1287	7	56	-5286	-6	1600	multi-exon	FALSE	canonical	2	7	junction_1	32.4572368235841	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTGTCTTAAAGTGCT	NA	False	NA	9	True	ATTAAA	-21	NA	64572011	64642016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.39	chr1	+	6794	9	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	14	-1580	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	37.3053280376946	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAAAGTCTCTTTTTTG	NA	False	NA	7	True	CATAAA	-16	NA	64572031	64642127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
ES.642.4	chr1	+	5546	11	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-22	1603	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	40.3867552546624	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571933	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.40	chr1	+	5990	7	FSM	ENSMUSG00000025958.15	ENSMUST00000171164.8	1287	7	76	-4779	14	1093	multi-exon	FALSE	canonical	2	7	junction_1	32.4572368235841	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGTGTGTAGATTT	NA	False	NA	NA	False	AATAAA	-37	NA	64572031	64641509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.41	chr1	+	4893	10	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	16	1092	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	41.0855776563751	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTGTAGATT	NA	False	NA	NA	False	AATAAA	-36	NA	64572033	64641508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.42	chr1	+	1030	4	NNC	ENSMUSG00000025958.15	novel	1288	7	NA	NA	-14	711	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	42.6223728418147	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAAAGACTGAACA	NA	False	NA	NA	False	NA	NA	NA	64572038	64598809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597704_64598084
ES.642.43	chr1	+	5275	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-4	-4011	-4	231	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTTGGGTGGCTTGTG	NA	False	NA	14	True	AATAAA	-31	NA	64572048	64640647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.44	chr1	+	5442	11	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	1	226	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	41.5957930565099	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTAGAGTTTTGGGTGGC	NA	False	NA	9	True	AATAAA	-26	NA	64572053	64640642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
ES.642.45	chr1	+	5307	10	NNC	ENSMUSG00000025958.15	novel	1260	9	NA	NA	7	1603	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	35.2434215908742	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64572059	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392_64636803_64638131
ES.642.46	chr1	+	6130	9	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	8	1076	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	37.3053280376946	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTTTGTGAACATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	64572060	64641492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392
ES.642.47	chr1	+	5345	10	NNC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	18	-1581	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	39.5720939208927	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTAAAGTCTCTTTTTT	NA	False	NA	6	True	CATAAA	-15	NA	64572070	64642126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64572180_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64614354_64614419_64615337_64615489_64636392_64636803_64638131
ES.642.48	chr1	+	5108	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCTGAATGTTACATG	NA	False	NA	NA	False	NA	NA	NA	64574052	64579160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_64574100_64579200
ES.642.49	chr1	+	4975	1	ISM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	66753	2	23184	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGACTTTGTGTCTAGC	NA	False	NA	NA	False	NA	NA	NA	64638730	64643705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_64638700_64643700
ES.642.5	chr1	+	6827	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	-40	1577	-18	-1577	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTCTCTTTTTTGGGC	NA	False	NA	10	True	CATAAA	-19	NA	64571937	64642130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.6	chr1	+	6823	9	NIC	ENSMUSG00000025958.15	novel	1420	10	NA	NA	-18	-1578	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	41.7700176562089	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571937	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572064_64590007_64590130_64597661_64597809_64600911_64601025_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.7	chr1	+	6248	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-114	-4874	-17	1094	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGTGTAGATTTA	NA	False	NA	NA	False	AATAAA	-38	NA	64571938	64641510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.642.8	chr1	+	6681	8	NIC	ENSMUSG00000025958.15	novel	1260	9	NA	NA	-14	-1578	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	35.9194109310363	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAAGTCTCTTTTTTGGG	NA	False	NA	9	True	CATAAA	-18	NA	64571941	64642129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64615337_64615489_64636392
ES.642.9	chr1	+	6708	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	-32	1688	-10	1603	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTTAAAGTGCTTTT	NA	False	NA	12	True	ATTAAA	-24	NA	64571945	64642019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ES.6420.1	chr11	+	180	1	Intergenic	novelGene_5173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	101573121	101573301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101573100_101573300
ES.6421.1	chr11	+	278	1	Intergenic	novelGene_5174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	101577246	101577524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101577200_101577500
ES.6422.1	chr11	+	213	1	Intergenic	novelGene_5175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	101579476	101579689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101579500_101579700
ES.6423.1	chr11	+	172	1	Intergenic	novelGene_5176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAGAAAACC	4335	False	NA	NA	False	NA	NA	NA	101593250	101593422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101593200_101593400
ES.6424.1	chr11	+	172	1	Intergenic	novelGene_5177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	101601444	101601616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101601400_101601600
ES.6425.1	chr11	-	188	1	Intergenic	novelGene_5178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	101614051	101613863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101613900_101614100
ES.6426.1	chr11	+	4420	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	-80	-15	-49	15	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTTGTTGGGCAGG	NA	False	NA	41	True	NA	NA	NA	101623695	101658199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ES.6426.11	chr11	+	3851	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	70	404	-9	147	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGACTCTCTTCATAG	NA	False	NA	NA	False	NA	NA	NA	101623845	101657780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
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ES.6426.2	chr11	+	4371	24	NNC	ENSMUSG00000034931.16	novel	4325	23	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	59.6817647483573	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	False	NA	26	True	NA	NA	NA	101623809	101658184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101637164_101637245_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
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ES.6426.22	chr11	+	5174	22	ISM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	1205	-1087	1114	1087	3prime_fragment	FALSE	canonical	3	151	junction_6	25.2150838490523	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTATATGTATGGGTA	257	False	NA	NA	False	NA	NA	NA	101624980	101659271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
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ES.6426.24	chr11	+	2947	15	ISM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	8549	5	8458	-5	3prime_fragment	FALSE	canonical	3	170	junction_13	24.5265370651497	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAATGGTTTATTATG	4367	False	NA	21	True	NA	NA	NA	101632324	101658179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
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ES.6426.6	chr11	+	4278	23	NNC	ENSMUSG00000034931.16	novel	4325	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	47.0739044411959	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	False	NA	26	True	NA	NA	NA	101623833	101658184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629399_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ES.6426.7	chr11	+	4257	23	NNC	ENSMUSG00000034931.16	novel	4325	23	NA	NA	-20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	47.1481093457207	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGGTTTATTATGAC	NA	False	NA	23	True	NA	NA	NA	101623834	101658181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640887_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ES.6426.8	chr11	+	4216	23	NNC	ENSMUSG00000034931.16	novel	4325	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	44.8227915755824	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	False	NA	26	True	NA	NA	NA	101623834	101658184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655734_101657465
ES.6426.9	chr11	+	5448	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	60	-1183	-19	1183	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTCTGGAGTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	101623835	101659367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ES.6427.1	chr11	-	2144	12	NIC	ENSMUSG00000017724.15	novel	2395	13	NA	NA	-8	1	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	6.20050651090179	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATTTGCTCTTTGCTT	NA	False	NA	-5	True	AATAAA	-20	NA	101676056	101660571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675933
ES.6427.2	chr11	-	2350	12	ISM	ENSMUSG00000017724.15	ENSMUST00000017868.7	2395	13	525	0	2	0	3prime_fragment	FALSE	canonical	2	8	junction_11	4.66745369199761	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGCTCTTTGCT	NA	False	NA	-6	True	AATAAA	-19	NA	101675672	101660572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
ES.6427.3	chr11	-	2273	13	FSM	ENSMUSG00000017724.15	ENSMUST00000107176.8	2377	13	104	0	-7	0	multi-exon	FALSE	canonical	2	8	junction_11	4.75803414120673	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGCTCTTTGCT	NA	False	NA	-6	True	AATAAA	-19	NA	101676093	101660572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665054_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
ES.6427.4	chr11	-	2126	11	NNC	ENSMUSG00000017724.15	novel	2395	13	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	5.98331012066064	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTATTTGCTCTTTGC	209	False	NA	-7	True	AATAAA	-18	NA	101675271	101660573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662721_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055
ES.6427.5	chr11	-	3932	11	NIC	ENSMUSG00000017724.15	novel	2395	13	NA	NA	68	-5	intron_retention	FALSE	canonical	2	8	junction_10	4.6946778377222	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTTTCTATTTGCTCT	NA	False	NA	-11	True	AATAAA	-14	NA	101675606	101660577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
ES.6428.1	chr11	-	151	1	Intergenic	novelGene_5179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAACCTT	NA	False	NA	NA	False	NA	NA	NA	101715437	101715286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101715300_101715400
ES.6429.1	chr11	-	162	1	Intergenic	novelGene_5180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	101759943	101759781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101759800_101759900
ES.643.1	chr1	-	210	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGTATGTTTTTTC	NA	False	NA	NA	False	AAAAAG	-10	NA	64597058	64596848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64596800_64597100
ES.6430.1	chr11	-	185	1	Intergenic	novelGene_5181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAGTGACTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	101814144	101813959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_101814000_101814100
ES.6431.1	chr11	+	2518	1	Intergenic	novelGene_5182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCCAGCAATGTTGG	NA	False	NA	NA	False	NA	NA	NA	101815446	101817964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101815400_101818000
ES.6432.1	chr11	-	4206	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	6	0	6	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101875619	101861968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101865766_101872442_101872670_101875437
ES.6432.2	chr11	-	1844	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	43	2325	-5	1	multi-exon	FALSE	canonical	3	8	junction_1	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACGTTCTCATTATTT	NA	False	NA	NA	False	NA	NA	NA	101875582	101864293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101865766_101872442_101872670_101875437
ES.6433.1	chr11	-	2007	8	ISM	ENSMUSG00000052373.15	ENSMUST00000100400.9	2997	18	15554	19	-130	-19	3prime_fragment	FALSE	canonical	0	0	junction_4	2.54750778573243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTATAGACTCAAAG	NA	False	NA	NA	False	AATAAA	-12	NA	101901366	101890496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_101891556_101892849_101892973_101895815_101895925_101896172_101896267_101899181_101899263_101899345_101899511_101900468_101900511_101901032
ES.6434.1	chr11	-	1016	6	FSM	ENSMUSG00000052373.15	ENSMUST00000147838.8	2834	6	-10	1828	-7	504	multi-exon	FALSE	canonical	2	3	junction_1	2.19089023002066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	101917770	101913755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101914291_101914527_101914609_101915902_101915981_101916206_101916326_101916557_101916683_101917692
ES.6435.1	chr11	-	4099	12	FSM	ENSMUSG00000017314.13	ENSMUST00000100398.5	3577	12	-13	-509	-13	0	multi-exon	TRUE	canonical	2	2	junction_2	3.33773813648833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTCTGTTTGTCATTG	661	False	NA	NA	False	ATTAAA	-17	NA	101973323	101947840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101973154
ES.6435.2	chr11	-	4098	13	FSM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	-10	1	-10	-1	multi-exon	FALSE	canonical	1	2	junction_2	3.83242742918897	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCTGTTTGTCATT	7657	False	NA	NA	False	ATTAAA	-16	NA	101979351	101947841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101979245
ES.6435.3	chr11	-	4031	13	NIC	ENSMUSG00000017314.13	novel	4089	13	NA	NA	275	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	4.0714111667687	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTCTGTTTGTCAT	8002	False	NA	NA	False	ATTAAA	-15	NA	101979006	101947842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101978966
ES.6436.1	chr11	+	1748	1	Intergenic	novelGene_5183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTGCAAAGTTAATC	7015	False	NA	NA	False	AATAAA	-23	NA	101994099	101995847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_101994100_101995800
ES.6437.1	chr11	+	182	1	Intergenic	novelGene_5184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102010478	102010660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102010500_102010700
ES.6438.1	chr11	+	572	1	FSM	ENSMUSG00000082045.5	ENSMUST00000120901.2	569	1	13	-16	13	16	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	102014910	102015482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102014900_102015500
ES.6439.1	chr11	-	159	1	Intergenic	novelGene_5185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102032938	102032779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102032800_102032900
ES.644.1	chr1	-	316	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAAATTTCACGTG	NA	False	NA	NA	False	NA	NA	NA	64602665	64602349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64602300_64602700
ES.6440.1	chr11	-	322	1	Intergenic	novelGene_5186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	102035370	102035048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102035000_102035400
ES.6440.2	chr11	-	167	1	Intergenic	novelGene_5187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGAGTGAGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	102035363	102035196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102035200_102035400
ES.6441.1	chr11	+	2855	3	NIC	ENSMUSG00000048217.12	novel	2714	4	NA	NA	-21	10	intron_retention	FALSE	canonical	3	24	junction_1	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCATCTAAGAAAAGT	NA	False	NA	22	True	NA	NA	NA	102036317	102040313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102036818_102037315_102039101_102039743
ES.6441.2	chr11	+	3473	2	ISM	ENSMUSG00000048217.12	ENSMUST00000129799.8	2714	4	-16	10	-16	-10	intron_retention	FALSE	canonical	3	24	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTCACACTTGTCTC	NA	False	NA	2	True	NA	NA	NA	102036322	102040293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102036818_102037315
ES.6441.3	chr11	+	6445	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-52	-4365	-16	4365	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGAGTGTCTACCTAA	NA	False	NA	NA	False	AAAAAG	-7	NA	102036322	102044668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
ES.6441.4	chr11	+	2958	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	-52	-878	-16	878	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTTTTTTTCAAATG	NA	False	NA	NA	False	NA	NA	NA	102036322	102041181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
ES.6442.2	chr11	-	1578	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	-5	1	-5	-1	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTTTGCTTCTGTC	4460	False	NA	-1	True	AATAAA	-15	NA	102047235	102043372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ES.6442.6	chr11	-	2511	3	FSM	ENSMUSG00000020921.7	ENSMUST00000143986.2	851	3	-35	-1625	22	-3	multi-exon	FALSE	canonical	3	250	junction_2	27	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTCTTTGCTTCTG	4487	False	NA	-3	True	AATAAA	-13	NA	102047208	102043374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102045530_102046549_102046731_102047033
ES.6442.7	chr11	-	1202	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	38	334	-11	-334	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGTGTGTGTGTGT	4503	False	NA	NA	False	ACTAAA	-16	NA	102047192	102043705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ES.6443.1	chr11	-	183	1	Intergenic	novelGene_5188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAACTGAAAGAAAA	2524	False	NA	NA	False	NA	NA	NA	102049171	102048988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102049000_102049200
ES.6444.1	chr11	+	215	1	Antisense	novelGene_ENSMUSG00000020922.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAATTCAAAGTGAG	4016	False	NA	NA	False	NA	NA	NA	102054197	102054412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102054200_102054400
ES.6445.1	chr11	+	1378	1	Intergenic	novelGene_5189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGCCAGGCATGGT	NA	False	NA	NA	False	NA	NA	NA	102067201	102068579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102067200_102068600
ES.6446.1	chr11	-	2273	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	-16	-1	-16	1	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTCAGGTTTGTGCG	6340	False	NA	0	True	AATAAA	-24	NA	102076138	102053321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ES.6446.2	chr11	-	3850	4	NIC	ENSMUSG00000020922.12	novel	2256	5	NA	NA	5	-1	intron_retention	FALSE	canonical	3	919	junction_1	23.7627158941622	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTCTCAGGTTTGTG	6361	False	NA	-2	True	AATAAA	-22	NA	102076117	102053323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102054994_102056185_102058023_102073683_102073818_102075908
ES.6446.3	chr11	-	2121	4	NIC	ENSMUSG00000020922.12	novel	2256	5	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	445.4737802485	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTCTCAGGTTTGTG	6395	False	NA	-2	True	AATAAA	-22	NA	102076083	102053323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102054994_102056185_102056313_102057912_102058023_102075869
ES.6446.5	chr11	-	1285	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	-3	974	-3	481	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTCTTGCAGGTCT	6353	False	NA	NA	False	ATTAAA	-16	NA	102076125	102054296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ES.6446.6	chr11	-	1126	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	1	1129	1	326	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGCAGAAGAAAGAGGTC	6357	False	NA	NA	False	AATAAA	-35	NA	102076121	102054451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ES.6446.7	chr11	-	906	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	-21	1371	-21	84	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAGACTTCGGCCCAC	6335	False	NA	-28	True	AAAAAG	-37	NA	102076143	102054693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ES.6447.1	chr11	+	158	1	Intergenic	novelGene_5190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACTATCAAATCAAGCC	NA	False	NA	NA	False	NA	NA	NA	102078215	102078373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102078200_102078400
ES.6448.1	chr11	+	1412	7	FSM	ENSMUSG00000034793.16	ENSMUST00000070334.10	1404	7	-10	2	-10	-2	multi-exon	TRUE	canonical	0	0	junction_1	57.3044985629885	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTTCTTGTCTGTGC	NA	False	NA	3	True	AATAAA	-17	NA	102080435	102084905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102080479_102080696_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ES.6448.2	chr11	+	1554	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	21	-2	21	2	multi-exon	FALSE	canonical	3	149	junction_4	4.31740662898458	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTGTCTGTGCTCTC	NA	False	NA	7	True	AATAAA	-21	NA	102080515	102084909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ES.6448.3	chr11	+	1358	5	NIC	ENSMUSG00000034793.16	novel	1573	6	NA	NA	6	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	66.956609083794	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTCTTTTCTTGTCTGT	NA	False	NA	1	True	AATAAA	-15	NA	102080586	102084903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102080970_102082860_102082968_102083298_102083390_102083910_102084053_102084268
ES.6448.4	chr11	+	4290	1	NIC	ENSMUSG00000034793.16	novel	1404	7	NA	NA	-34	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102080617	102084907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102080600_102084900
ES.6448.5	chr11	+	1637	5	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	150	2	-7	-2	intron_retention	FALSE	canonical	3	149	junction_4	2.29128784747792	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTTCTTGTCTGTGC	NA	False	NA	3	True	AATAAA	-17	NA	102080644	102084905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910
ES.6449.1	chr11	-	3981	28	FSM	ENSMUSG00000008855.18	ENSMUST00000124077.8	3872	28	-104	-5	-77	0	multi-exon	TRUE	canonical	1	1	junction_25	66.6396241448948	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCCGTGTGGGTCTCT	NA	False	NA	0	True	ATTAAA	-25	NA	102121069	102086569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
ES.6449.10	chr11	-	3844	26	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	0	intron_retention	FALSE	canonical	1	50	junction_24	48.667952494429	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120961	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ES.6449.11	chr11	-	3999	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_26	54.5129185058337	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120967	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120595
ES.6449.12	chr11	-	3063	24	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	70.6475048624452	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120964	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097381_102097455_102097544_102120935
ES.6449.14	chr11	-	4347	27	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	56.5675095447437	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120933	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102091444_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ES.6449.16	chr11	-	3822	25	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	-12	0	intron_retention	FALSE	canonical	1	22	junction_23	53.2773143300432	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102121004	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.18	chr11	-	3926	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-5	0	intron_retention	FALSE	canonical	1	78	junction_13	40.5215991787096	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120997	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.2	chr11	-	3866	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102121069	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.20	chr11	-	3901	28	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	65.5412623045352	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120967	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102109970_102110108_102115559_102115782_102120830
ES.6449.21	chr11	-	4092	26	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	0	intron_retention	FALSE	canonical	1	16	junction_25	61.0813752300978	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120964	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120595
ES.6449.22	chr11	-	3833	26	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	7	0	intron_retention	FALSE	canonical	1	78	junction_13	41.1161087653002	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120943	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.23	chr11	-	3777	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	67.661618917642	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120943	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090335_102090461_102090512_102090794_102090920_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.24	chr11	-	3972	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	66.4587339151858	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120924	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097381_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120595
ES.6449.25	chr11	-	3679	27	NNC	ENSMUSG00000008855.18	novel	3759	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.9802442586628	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120971	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095699_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.27	chr11	-	3700	25	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	56.4680342219285	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120964	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102120595
ES.6449.28	chr11	-	3552	24	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_23	57.1871864241922	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120968	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102120830
ES.6449.30	chr11	-	5455	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-1367	0	intron_retention	FALSE	canonical	0	0	junction_7	84.0607697903813	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102111122	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102088699_102088831_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241
ES.6449.31	chr11	-	3677	26	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_22	65.4921552554197	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120936	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097381_102097455_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.32	chr11	-	3666	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.7194454027935	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120965	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086874_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ES.6449.34	chr11	-	3933	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	17	0	intron_retention	FALSE	canonical	1	1	junction_24	67.8875353479658	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120933	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
ES.6449.35	chr11	-	3742	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	54.0670332350522	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120953	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087143_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.36	chr11	-	4010	25	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	intron_retention	FALSE	canonical	1	22	junction_23	53.2796604927455	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120967	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.37	chr11	-	3991	29	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	74.1999504923098	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120939	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102102907_102103053_102104750_102104863_102109241_102109314_102115559_102115782_102120830
ES.6449.38	chr11	-	4772	25	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	15	0	intron_retention	FALSE	canonical	1	1	junction_23	67.9865182713946	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120935	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095699_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102110108_102115559_102115782_102120830
ES.6449.4	chr11	-	3821	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	94.5795116484994	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102109478	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087360_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102088699_102088831_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090920_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241
ES.6449.43	chr11	-	3926	27	NIC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	14	0	intron_retention	FALSE	canonical	1	1	junction_24	67.7846943852328	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120936	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
ES.6449.44	chr11	-	3922	26	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_25	63.8786850209051	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120964	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120595
ES.6449.45	chr11	-	4274	26	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	60.6612100110111	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120937	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102091444_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.46	chr11	-	4020	17	NNC	ENSMUSG00000008855.18	novel	3759	27	NA	NA	-5015	0	intron_retention	FALSE	canonical	0	0	junction_1	92.0302047903296	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	4662	False	NA	-5	True	ATTAAA	-20	NA	102096657	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089685_102089830_102089887_102090191_102090335_102090461_102090512_102090794_102090916_102091225_102092231_102092878_102093161_102093369_102093582_102095256_102096458_102096615
ES.6449.47	chr11	-	3748	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.3798402847378	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120964	102086574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090472_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.48	chr11	-	3937	29	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	73.8828619905751	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAACGTGTGCCGTGTGG	NA	False	NA	-6	True	ATTAAA	-19	NA	102120964	102086575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102111560_102111594_102112143_102112287_102115559_102115782_102120830
ES.6449.5	chr11	-	3895	27	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	61.7194454027935	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102121069	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086721_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ES.6449.51	chr11	-	3773	26	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_25	55.513083142625	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120964	102086576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102120595
ES.6449.54	chr11	-	3904	25	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	66.3566620409904	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120965	102086576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088366_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.55	chr11	-	4059	28	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	80.4710582809154	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120959	102086576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095100_102095176_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097598_102097732_102097993_102109241_102109314_102115559_102115782_102120595
ES.6449.57	chr11	-	3693	27	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	7	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.2276971575752	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAGTCACACAT	NA	False	NA	-27	True	NA	NA	NA	102120943	102086596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086774_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097572_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ES.6449.58	chr11	-	3638	27	NNC	ENSMUSG00000008855.18	novel	3872	28	NA	NA	1	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	56.4666865186061	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAGTCACACAT	NA	False	NA	-27	True	NA	NA	NA	102120967	102086596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096645_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ES.6449.6	chr11	-	3735	26	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	22	junction_24	52.2038466015676	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102121010	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
ES.6449.7	chr11	-	4504	27	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_17	66.7566897119815	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120964	102086572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095429_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102110108_102115559_102115782_102120830
ES.645.1	chr1	-	2854	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	870	-1058	-667	1051	multi-exon	FALSE	canonical	3	51	junction_1	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTCTTTGCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	64655457	64644580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64647297_64654256_64654369_64655431
ES.645.2	chr1	-	2564	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-535	1	-535	-1	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCAGTGTTGTCTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	64656936	64645632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ES.645.5	chr1	-	1929	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	-514	615	-514	-608	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAACTTGTAGGTTAGA	NA	False	NA	0	True	AATAAA	-24	NA	64656915	64646246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ES.645.6	chr1	-	2278	4	NNC	ENSMUSG00000025956.11	novel	372	4	NA	NA	1	-608	intron_retention	FALSE	canonical	0	0	junction_1	25.4689353265241	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAACTTGTAGGTTAGA	NA	False	NA	0	True	AATAAA	-24	NA	64656326	64646246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64647297_64653206_64653428_64654256_64654369_64655431
ES.645.8	chr1	-	1116	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	12	902	12	581	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTGTACTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	64656389	64646533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ES.6450.1	chr11	-	158	1	Intergenic	novelGene_5191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102122866	102122708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102122700_102122900
ES.6451.1	chr11	+	2595	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-49	1	-49	-1	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCGTCCCACACCTCC	NA	False	NA	14	True	AATAAA	-21	NA	102139658	102156012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.10	chr11	+	5538	7	NIC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	6	junction_6	117.107737670157	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102139690	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150769_102150904_102153127_102154746
ES.6451.11	chr11	+	6445	10	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	99.1177127846195	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGCCTCCGTCCCAC	NA	False	NA	8	True	AATAAA	-15	NA	102139692	102156006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.12	chr11	+	4667	8	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-14	-5	intron_retention	FALSE	canonical	1	5	junction_5	112.466412219609	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102139693	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150440_102150769_102150904_102153127_102155460
ES.6451.13	chr11	+	3250	8	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-14	-10	intron_retention	FALSE	canonical	3	289	junction_3	23.3141806720323	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102139693	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150769_102150904_102151443_102153008_102153127_102155460
ES.6451.14	chr11	+	4953	6	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	289	junction_3	23.2172349774903	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCCTCCGTCCCACA	NA	False	NA	9	True	AATAAA	-16	NA	102139696	102156007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102153127_102155460
ES.6451.15	chr11	+	2783	10	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	102.808103634098	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102139703	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141793_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.17	chr11	+	2779	12	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	151.911076642263	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCGTCCCACACCTCC	NA	False	NA	14	True	AATAAA	-21	NA	102139703	102156012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102154746_102154820_102155460
ES.6451.18	chr11	+	2747	12	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	143.382687383527	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102139703	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145155_102145206_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.19	chr11	+	2894	12	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.68324896472	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102139703	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102144823_102144887_102145155_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.21	chr11	+	3238	10	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	23	-3	intron_retention	FALSE	canonical	3	6	junction_9	130.062188354288	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCCGTCCCACACCT	NA	False	NA	12	True	AATAAA	-19	NA	102139730	102156010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150656_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102154746
ES.6451.23	chr11	+	2569	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	47	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	128.136645812195	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTCCGTCCCACACC	NA	False	NA	11	True	AATAAA	-18	NA	102139754	102156009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102154746_102154820_102155460
ES.6451.24	chr11	+	3065	13	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	63	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	152.505919739384	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102139770	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102144596_102144887_102145043_102145184_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.25	chr11	+	3967	9	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	138	-8	intron_retention	FALSE	canonical	3	289	junction_3	21.9772609758359	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCAGCCTCCGTCCCA	NA	False	NA	7	True	AATAAA	-14	NA	102139845	102156005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102153127_102155460
ES.6451.26	chr11	+	6589	9	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	1833	-5	intron_retention	FALSE	canonical	0	0	junction_1	143.772172203108	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102141540	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102146848_102147714_102147785_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.27	chr11	+	4806	7	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-2903	-10	intron_retention	FALSE	canonical	3	289	junction_1	25.0333111406914	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102143574	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102151443_102153008_102153127_102155460
ES.6451.28	chr11	+	4729	7	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-1761	-185	intron_retention	FALSE	canonical	3	289	junction_1	24.4568781509188	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCAAGAGGCTGGAC	NA	False	NA	NA	False	AAGAAA	-24	NA	102144716	102155828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102153127_102155460
ES.6451.29	chr11	+	2331	8	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	6018	8	-752	-8	3prime_fragment	FALSE	canonical	3	289	junction_1	23.1789841477673	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCAGCCTCCGTCCCA	190	False	NA	7	True	AATAAA	-14	NA	102145725	102156005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.3	chr11	+	4507	8	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-31	-10	intron_retention	FALSE	canonical	3	289	junction_3	22.6445470302252	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102139676	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150769_102150904_102150991_102151316_102153127_102155460
ES.6451.30	chr11	+	1180	6	ISM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	10383	8	-2699	-8	3prime_fragment	FALSE	canonical	3	323	junction_3	8.47112743381895	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCAGCCTCCGTCCCA	3729	False	NA	7	True	AATAAA	-14	NA	102150090	102156005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.31	chr11	+	2075	1	NIC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	1148	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCGTCCCACACCTCC	7576	False	NA	14	True	AATAAA	-21	NA	102153937	102156012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102153900_102156000
ES.6451.4	chr11	+	2789	10	NNC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-31	-8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	101.800458414161	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCAGCCTCCGTCCCA	NA	False	NA	7	True	AATAAA	-14	NA	102139676	102156005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150440_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.5	chr11	+	2912	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-31	-334	-31	334	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCATCTCTCCAGCCAC	NA	False	NA	NA	False	NA	NA	NA	102139676	102156347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.6	chr11	+	2730	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-31	-4	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	126.309144562062	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTCCGTCCCACACC	NA	False	NA	11	True	AATAAA	-18	NA	102139676	102156009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.7	chr11	+	2392	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	-25	180	-25	-180	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGGCTGGACTTGAT	NA	False	NA	NA	False	AAGAAA	-29	NA	102139682	102155833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6451.8	chr11	+	3646	9	NIC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	6	junction_8	105.437703763881	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCCTCCGTCCCACAC	NA	False	NA	10	True	AATAAA	-17	NA	102139690	102156008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102154746
ES.6451.9	chr11	+	2503	9	NIC	ENSMUSG00000034773.17	novel	2547	10	NA	NA	-17	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	108.630034405776	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGCCAGCCTCCGTCC	NA	False	NA	5	True	AATAAA	-12	NA	102139690	102156003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102139919_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ES.6452.1	chr11	-	3067	1	Antisense	novelGene_ENSMUSG00000034773.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7052	False	NA	NA	False	NA	NA	NA	102156986	102153919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_102153900_102157000
ES.6453.1	chr11	+	2493	6	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	-633	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	20.9322717352895	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTGTGGACATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	102158935	102170282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102159015_102163312_102163581_102167204_102167698_102168003_102168118_102168701_102168940_102168981
ES.6453.10	chr11	+	1756	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	8244	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.4309521329882	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTGTGGACATTGT	3959	False	NA	NA	False	AATAAA	-15	NA	102167812	102170282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167916_102168003_102168118_102168701_102168940_102168981
ES.6453.2	chr11	+	2700	5	FSM	ENSMUSG00000034768.5	ENSMUST00000036467.5	2843	5	143	0	143	0	multi-exon	FALSE	canonical	0	0	junction_1	21.6722749151998	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGACATTGTAGGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	102159711	102170288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102159950_102163312_102163581_102167204_102167698_102168003_102168118_102168701
ES.6453.3	chr11	+	157	1	Intergenic	novelGene_5192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	1309	False	NA	NA	False	NA	NA	NA	102165162	102165319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102165200_102165300
ES.6453.5	chr11	+	1345	2	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7740	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAACGTGTGGACATT	3455	False	NA	NA	False	AATAAA	-13	NA	102167308	102170280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167698_102169324
ES.6453.6	chr11	+	3608	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7760	1580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.0504472113883	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCCTGATGTTGCTTT	3475	False	NA	NA	False	NA	NA	NA	102167328	102171868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167698_102168003_102168118_102168701_102168940_102168981
ES.6453.7	chr11	+	2539	3	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7824	-8	intron_retention	FALSE	non_canonical	0	0	junction_2	27	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAACGTGTGGACATT	3539	False	NA	NA	False	AATAAA	-13	NA	102167392	102170280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167698_102168003_102168933_102168975
ES.6453.8	chr11	+	3928	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7931	2072	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.0504472113883	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGGCTTTGCTTTGT	3646	False	NA	NA	False	ATTAAA	-13	NA	102167499	102172360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167698_102168003_102168118_102168701_102168933_102168975
ES.6453.9	chr11	+	1803	4	NNC	ENSMUSG00000034768.5	novel	2843	5	NA	NA	7976	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	22.0504472113883	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAACGTGTGGACATT	3691	False	NA	NA	False	AATAAA	-13	NA	102167544	102170280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102167698_102168003_102168118_102168701_102168933_102168975
ES.6454.1	chr11	-	325	1	Intergenic	novelGene_5193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCAAAAAAACAA	6287	False	NA	NA	False	NA	NA	NA	102171432	102171107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102171100_102171400
ES.6454.2	chr11	-	217	1	Intergenic	novelGene_5194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCATTCGGGAGGC	6286	False	NA	NA	False	NA	NA	NA	102171433	102171216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102171200_102171400
ES.6455.1	chr11	+	179	1	Intergenic	novelGene_5195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATATAGTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	102173903	102174082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102173900_102174100
ES.6456.1	chr11	+	2088	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	-148	-1	-148	1	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTCTTTGTGACTGCT	NA	False	NA	17	True	AATAAA	-19	NA	102175608	102180064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ES.6456.10	chr11	+	2452	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-9	-194	-9	194	multi-exon	FALSE	canonical	3	94	junction_1	18.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGAGCCCCACCCCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	102176012	102180257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102176545_102178133_102178698_102178901
ES.6456.11	chr11	+	232	2	ISM	ENSMUSG00000034757.16	ENSMUST00000135551.2	578	3	2797	40	2540	-40	3prime_fragment	FALSE	canonical	3	131	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAACTGCGTGATCCACT	NA	False	NA	NA	False	NA	NA	NA	102178561	102178997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102178698_102178901
ES.6456.2	chr11	+	4324	1	Genic_Genomic	ENSMUSG00000034757.16	novel	NA	NA	NA	NA	-18	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	False	NA	15	True	AATAAA	-17	NA	102175738	102180062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_102175700_102180100
ES.6456.3	chr11	+	1893	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	-18	1	-10	-1	multi-exon	FALSE	canonical	3	43	junction_1	44	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	False	NA	15	True	AATAAA	-17	NA	102175746	102180062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102175915_102178133_102178698_102178901
ES.6456.4	chr11	+	4111	2	NIC	ENSMUSG00000034757.16	novel	2249	3	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	131	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175746	102180061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102178698_102178901
ES.6456.5	chr11	+	3219	3	NIC	ENSMUSG00000034757.16	novel	1876	3	NA	NA	-9	-2	intron_retention	FALSE	canonical	0	0	junction_1	65.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175747	102180061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102175915_102176805_102178698_102178901
ES.6456.6	chr11	+	3345	2	NIC	ENSMUSG00000034757.16	novel	2249	3	NA	NA	-7	261	intron_retention	FALSE	canonical	3	131	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTGGCCTCCCTCCTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	102175749	102179298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102178698_102178901
ES.6456.7	chr11	+	1621	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	-3	258	-3	-258	multi-exon	FALSE	canonical	3	43	junction_1	44	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGCTCTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	102175761	102179805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102175915_102178133_102178698_102178901
ES.6456.8	chr11	+	2492	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	-245	2	0	-2	multi-exon	FALSE	canonical	3	94	junction_1	18.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGCCTCTTTGTGACT	NA	False	NA	14	True	AATAAA	-16	NA	102175776	102180061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102176545_102178133_102178698_102178901
ES.6456.9	chr11	+	2081	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	47	-189	27	189	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGCGTGAGCCCCACC	NA	False	NA	NA	False	AATAAA	-15	NA	102175803	102180252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ES.6457.1	chr11	+	1503	1	Antisense	novelGene_ENSMUSG00000059995.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGACCATCTTTGG	1843	False	NA	NA	False	ATTAAA	-14	NA	102187232	102188735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102187200_102188700
ES.6458.1	chr11	-	4226	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-465	-73	-465	73	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTTATTCATTCATA	NA	False	NA	67	True	NA	NA	NA	102187922	102180052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.10	chr11	-	3690	12	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.2841109672823	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187459	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183626_102184097_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.11	chr11	-	3920	13	NNC	ENSMUSG00000059995.13	novel	3706	13	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	56.6862711186168	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187612	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184902_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.12	chr11	-	3895	12	NNC	ENSMUSG00000059995.13	novel	3706	13	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	48.8399308248405	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187661	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184175_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.14	chr11	-	4178	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	-472	0	-470	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187927	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.15	chr11	-	3924	13	NNC	ENSMUSG00000059995.13	novel	3706	13	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	56.0825284736699	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187711	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185094_102185335_102185469_102185774_102185886_102187228
ES.6458.16	chr11	-	3902	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-253	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	45.6608116684562	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187710	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185094_102185335_102185469_102185774_102185886_102187228
ES.6458.19	chr11	-	3900	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-157	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	46.6877184659473	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCGGCCTGCCCACTCT	NA	False	NA	-8	True	AATAAA	-17	NA	102187614	102180127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184902_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.2	chr11	-	4760	12	FSM	ENSMUSG00000059995.13	ENSMUST00000107134.8	3712	12	-1047	-1	270	1	multi-exon	FALSE	canonical	3	127	junction_7	17.6967102513153	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTGCCCACTCTCAT	NA	False	NA	-5	True	AATAAA	-20	NA	102187185	102180124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774
ES.6458.21	chr11	-	3465	10	NIC	ENSMUSG00000059995.13	novel	3712	12	NA	NA	-379	-1	intron_retention	FALSE	canonical	3	127	junction_6	18.8587995638019	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCGGCCTGCCCACTCT	NA	False	NA	-8	True	AATAAA	-17	NA	102185368	102180127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335
ES.6458.22	chr11	-	3718	12	NIC	ENSMUSG00000059995.13	novel	3706	13	NA	NA	-34	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	48.8399308248405	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCGGCCTGCCCACTCT	NA	False	NA	-8	True	AATAAA	-17	NA	102187491	102180127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.23	chr11	-	3493	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	45.5317349646254	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCCGGCCTGCCCACTC	NA	False	NA	-9	True	AATAAA	-16	NA	102187498	102180128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185870_102187445
ES.6458.26	chr11	-	3643	12	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	61.93745178714	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCCGGCCTGCCCACTC	NA	False	NA	-9	True	AATAAA	-16	NA	102187476	102180128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184669_102184768_102184959_102185094_102185335_102185469_102185774_102185886_102187228
ES.6458.27	chr11	-	3342	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	-414	760	-414	-759	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCCTTGGCCCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	102187871	102180885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.28	chr11	-	3361	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	-417	762	-415	-762	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCCTCTGTCCTTGGCCC	NA	False	NA	NA	False	AATAAA	-14	NA	102187872	102180888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.29	chr11	-	2243	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	115	1348	115	-1348	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCCCTTGCCGCTTTT	NA	False	NA	NA	False	NA	NA	NA	102187340	102181474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.3	chr11	-	4273	13	NNC	ENSMUSG00000059995.13	novel	3706	13	NA	NA	355	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	55.8353233476205	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187100	102180125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102186307
ES.6458.4	chr11	-	4162	13	NIC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-417	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	44.3723982022859	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187874	102180125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183979_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.5	chr11	-	4317	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	290	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	44.7631886214058	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187165	102180125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102186307
ES.6458.7	chr11	-	3874	12	NIC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-232	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	48.2627108252152	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187689	102180125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ES.6458.8	chr11	-	4014	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	364	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.5317349646254	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187091	102180125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102186536
ES.6458.9	chr11	-	3867	13	NNC	ENSMUSG00000059995.13	novel	3688	13	NA	NA	-265	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.8739444325594	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187722	102180126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185047_102185335_102185469_102185774_102185886_102187228
ES.6459.10	chr11	+	1656	11	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	8025	False	NA	NA	False	NA	NA	NA	102200395	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102200598_102200699_102200736_102201016_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.12	chr11	+	4016	9	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	8025	False	NA	NA	False	NA	NA	NA	102200395	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102200598_102200699_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.13	chr11	+	2019	9	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	8027	False	NA	NA	False	NA	NA	NA	102200397	102207584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.3	chr11	+	2780	20	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.669890634808308	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	4980	False	NA	NA	False	NA	NA	NA	102197350	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102197593_102197681_102197825_102197903_102197977_102198069_102198118_102198774_102198961_102199048_102199146_102199526_102199641_102199726_102199875_102200221_102200378_102200478_102200598_102200699_102200736_102201016_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.4	chr11	+	2669	19	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.687184270936277	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	4980	False	NA	NA	False	NA	NA	NA	102197350	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102197593_102197681_102197825_102197903_102197977_102198069_102198118_102198774_102198961_102199048_102199146_102199526_102199641_102199726_102199875_102200221_102200378_102200478_102200598_102200699_102200736_102201016_102201158_102201267_102201402_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.5	chr11	+	3852	15	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.772618130456569	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	4980	False	NA	NA	False	NA	NA	NA	102197350	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102197593_102197681_102197976_102198069_102198961_102199048_102199146_102199526_102199641_102199726_102200598_102200699_102200736_102201016_102201158_102201267_102201402_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.6	chr11	+	2778	20	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0.669890634808308	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	4980	False	NA	NA	False	NA	NA	NA	102197350	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102197593_102197681_102197825_102197903_102197977_102198069_102198118_102198774_102198961_102199048_102199146_102199526_102199641_102199726_102199875_102200221_102200378_102200478_102200598_102200699_102200744_102201026_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102202645_102204723_102204880_102204964_102205043_102205682_102205868_102207176
ES.6459.8	chr11	+	6075	6	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTCCTCCTCCTCCTC	8025	False	NA	NA	False	NA	NA	NA	102200395	102207602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102200598_102200699_102201402_102201750_102201862_102202204_102202326_102202578_102204880_102204964
ES.6459.9	chr11	+	3154	11	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	8025	False	NA	NA	False	NA	NA	NA	102200395	102207584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102200598_102200699_102200736_102201016_102201158_102201267_102201402_102201750_102201862_102202204_102202326_102202578_102204179_102204741_102204880_102204964_102205043_102205682_102205868_102207176
ES.646.1	chr1	-	723	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	3	-15	3	15	multi-exon	FALSE	canonical	3	111	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGGTTTCTCTGTCTTA	7930	False	NA	-1	True	AATAAA	-36	NA	64729815	64719014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64719545_64729622
ES.646.2	chr1	-	10741	2	NNC	ENSMUSG00000087213.3	novel	711	2	NA	NA	3	5	intron_retention	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACCTATGTGGTTT	7930	False	NA	-11	True	AATAAA	-26	NA	64729815	64719024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64719599_64719648
ES.6460.1	chr11	+	5650	1	Antisense	novelGene_ENSMUSG00000020923.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTCTGTTATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102207789	102213439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102207800_102213400
ES.6461.1	chr11	-	4130	22	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	19	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	240.407646997124	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGTCTGGTCACTGGAA	9185	False	NA	34	True	AATAAA	-20	NA	102207482	102195385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195621_102195994_102196546_102196667_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.12	chr11	-	3939	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	137	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.713080482089	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTTTGACTTTCGTCT	8498	False	NA	23	True	AATAAA	-9	NA	102210431	102195396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195848_102196622_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.13	chr11	-	3835	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.034016691749	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGGTTTGACTTTCGTC	9125	False	NA	22	True	AATAAA	-8	NA	102207542	102195397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195841_102196679_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.14	chr11	-	2571	21	NNC	ENSMUSG00000020923.18	novel	2759	21	NA	NA	65	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.034016691749	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGGTTTGACTTT	9231	False	NA	18	True	AATAAA	-4	NA	102207436	102195401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195527_102197519_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.15	chr11	-	1157	2	NNC	ENSMUSG00000020923.18	novel	3199	19	NA	NA	2898	-15	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGGTTTGACTTT	NA	False	NA	18	True	AATAAA	-4	NA	102197368	102195401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195829_102196638
ES.6461.16	chr11	-	3461	20	NNC	ENSMUSG00000020923.18	novel	4580	20	NA	NA	245	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	227.579677685181	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGGTTTGACTTT	9411	False	NA	18	True	AATAAA	-4	NA	102207256	102195401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195866_102196677_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.17	chr11	-	928	2	NNC	ENSMUSG00000020923.18	novel	4580	20	NA	NA	-505	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAAGGTTTGACTTT	7856	False	NA	18	True	AATAAA	-4	NA	102211073	102195401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195831_102210574
ES.6461.18	chr11	-	1258	8	NNC	ENSMUSG00000020923.18	novel	4580	20	NA	NA	151	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	288.191121391655	796	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAACCAAGGTTTGAC	NA	False	NA	15	True	AATAAA	-1	NA	102200583	102195404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195830_102198090_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479
ES.6461.19	chr11	-	3842	22	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	30	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.812279618292	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGTGAAAAACCAAGG	9037	False	NA	9	True	NA	NA	NA	102209892	102195410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195832_102196626_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.20	chr11	-	3396	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-813	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	226.713080482089	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGGTATGCATAGAAT	7548	False	NA	74	True	NA	NA	NA	102211381	102196735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102211347
ES.6461.21	chr11	-	4289	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	-989	-14	-34	14	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGGTATGCATAGAAT	8172	False	NA	74	True	NA	NA	NA	102208495	102196735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.22	chr11	-	3832	20	NIC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-505	9	combination_of_known_junctions	FALSE	canonical	3	106	junction_19	210.872137020862	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCTCTGTTGTCATTT	7856	False	NA	0	True	NA	NA	NA	102211073	102196809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.23	chr11	-	3194	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	-39	1425	-39	7	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGTCTCTGTTGTCAT	8968	False	NA	-2	True	NA	NA	NA	102209961	102196811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.24	chr11	-	3369	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	-103	1426	-103	7	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGTCTCTGTTGTCAT	8904	False	NA	-2	True	NA	NA	NA	102210025	102196811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.25	chr11	-	3513	20	NIC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	1	6	intron_retention	FALSE	canonical	3	106	junction_19	174.811572478987	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGTCTCTGTTGTCA	8362	False	NA	-3	True	NA	NA	NA	102210567	102196812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.26	chr11	-	3226	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107117.9	3258	20	-34	66	-34	3	multi-exon	FALSE	canonical	3	90	junction_19	213.309601634771	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	7936	False	NA	-6	True	NA	NA	NA	102208731	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ES.6461.28	chr11	-	3482	21	FSM	ENSMUSG00000020923.18	ENSMUST00000107123.10	2759	21	-415	-308	-179	3	multi-exon	FALSE	canonical	3	90	junction_20	173.298954122637	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9961	False	NA	-6	True	NA	NA	NA	102208876	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ES.6461.29	chr11	-	3151	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	103	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	190.034016691749	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	8657	False	NA	-6	True	NA	NA	NA	102208010	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102207872
ES.6461.3	chr11	-	2596	11	NNC	ENSMUSG00000020923.18	novel	3199	19	NA	NA	18	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	332.101249621256	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCGTCTGGTCACTG	NA	False	NA	31	True	AATAAA	-17	NA	102200248	102195388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195557_102195896_102196564_102196667_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222
ES.6461.30	chr11	-	3142	20	NNC	ENSMUSG00000020923.18	novel	4580	20	NA	NA	278	3	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_19	218.278330035029	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9285	False	NA	-6	True	NA	NA	NA	102209644	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209404
ES.6461.32	chr11	-	3447	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-759	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	226.713080482089	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	7602	False	NA	-6	True	NA	NA	NA	102211327	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102211162
ES.6461.34	chr11	-	3217	20	NIC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	134	3	intron_retention	FALSE	canonical	3	130	junction_19	164.003006526053	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCTGCCGTCTCTGTTG	9141	False	NA	-6	True	NA	NA	NA	102209788	102196815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.35	chr11	-	3415	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-1009	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	226.713080482089	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	7352	False	NA	-7	True	NA	NA	NA	102211577	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102211443
ES.6461.36	chr11	-	3074	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	332	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	190.034016691749	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9339	False	NA	-7	True	NA	NA	NA	102209590	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209528
ES.6461.37	chr11	-	4518	16	ISM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	2815	67	2810	2	3prime_fragment	FALSE	canonical	3	503	junction_14	107.921452918315	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	NA	False	NA	-7	True	NA	NA	NA	102204691	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579
ES.6461.39	chr11	-	3121	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	134	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	226.290432851237	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9141	False	NA	-7	True	NA	NA	NA	102209788	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198959_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.4	chr11	-	3668	22	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	174	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	223.812279618292	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTCGTCTGGTCACTG	9181	False	NA	31	True	AATAAA	-17	NA	102209748	102195388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195831_102196677_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.43	chr11	-	3162	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	368	2	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_20	179.182274513971	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	9375	False	NA	-7	True	NA	NA	NA	102209554	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209404
ES.6461.45	chr11	-	3504	21	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-502	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	257.443755993421	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGCTGCCGTCTCTGTT	7859	False	NA	-7	True	NA	NA	NA	102211070	102196816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102210736
ES.6461.49	chr11	-	3234	20	NIC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-58	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	235.016118973328	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8949	False	NA	-8	True	NA	NA	NA	102209980	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102205689_102205866_102207174_102207300_102209673
ES.6461.53	chr11	-	3086	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-121	1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_20	188.523970624427	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8433	False	NA	-8	True	NA	NA	NA	102208234	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208159
ES.6461.54	chr11	-	3197	19	NIC	ENSMUSG00000020923.18	novel	3258	20	NA	NA	72	1	intron_retention	FALSE	canonical	3	90	junction_18	219.118238558856	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8042	False	NA	-8	True	NA	NA	NA	102208625	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ES.6461.56	chr11	-	3208	21	NIC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-83	1	combination_of_known_junctions	FALSE	canonical	2	2	junction_20	189.656129613572	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8471	False	NA	-8	True	NA	NA	NA	102208196	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102207999
ES.6461.57	chr11	-	3915	20	NIC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-384	1	intron_retention	FALSE	canonical	3	106	junction_19	174.157171031246	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	7977	False	NA	-8	True	NA	NA	NA	102210952	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.6	chr11	-	4440	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	135	5	135	-5	multi-exon	FALSE	canonical	3	130	junction_19	207.277671834178	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACTTTCGTCTGGTCA	9142	False	NA	28	True	AATAAA	-14	NA	102209787	102195391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.60	chr11	-	3360	20	NIC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-10	1	intron_retention	FALSE	canonical	3	130	junction_19	167.686391104862	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8997	False	NA	-8	True	NA	NA	NA	102209932	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.65	chr11	-	3401	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-278	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	226.713080482089	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8083	False	NA	-8	True	NA	NA	NA	102210846	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102210725
ES.6461.66	chr11	-	3063	21	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-179	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_20	187.017987102845	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	9961	False	NA	-8	True	NA	NA	NA	102208876	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208824
ES.6461.69	chr11	-	3310	20	NIC	ENSMUSG00000020923.18	novel	2759	21	NA	NA	70	1	intron_retention	FALSE	canonical	3	90	junction_19	177.796843198982	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	8040	False	NA	-8	True	NA	NA	NA	102208627	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ES.6461.7	chr11	-	4792	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	63	-1919	63	-6	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTTTCGTCTGGTC	8424	False	NA	27	True	AATAAA	-13	NA	102210505	102195392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.70	chr11	-	2981	20	NNC	ENSMUSG00000020923.18	novel	4580	20	NA	NA	-208	1	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_19	224.977733585834	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	9932	False	NA	-8	True	NA	NA	NA	102208905	102196817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208824
ES.6461.74	chr11	-	3507	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	-810	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	226.713080482089	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	7551	False	NA	-9	True	NA	NA	NA	102211378	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149_102210419_102211150
ES.6461.78	chr11	-	3213	20	NNC	ENSMUSG00000020923.18	novel	3013	20	NA	NA	-1189	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	227.579677685181	791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	7172	False	NA	-9	True	NA	NA	NA	102211757	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102211443
ES.6461.79	chr11	-	3391	20	NIC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	149	0	intron_retention	FALSE	canonical	3	130	junction_19	170.373859724907	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9156	False	NA	-9	True	NA	NA	NA	102209773	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ES.6461.8	chr11	-	3935	22	NNC	ENSMUSG00000020923.18	novel	2936	21	NA	NA	77	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.713080482089	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTTTCGTCTGGTC	8438	False	NA	27	True	AATAAA	-13	NA	102210491	102195392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102195835_102196677_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6461.80	chr11	-	3381	22	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	-3371	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	240.407646997124	791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	4990	False	NA	-9	True	NA	NA	NA	102213939	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102211443_102211717_102213841
ES.6461.81	chr11	-	3209	20	NNC	ENSMUSG00000020923.18	novel	4692	21	NA	NA	412	0	intron_retention	FALSE	canonical	3	58	junction_19	183.081336086639	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9419	False	NA	-9	True	NA	NA	NA	102209510	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209404
ES.6461.82	chr11	-	3233	18	NIC	ENSMUSG00000020923.18	novel	3013	20	NA	NA	7	0	intron_retention	FALSE	canonical	3	144	junction_12	161.738628914199	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9144	False	NA	-9	True	NA	NA	NA	102207523	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.83	chr11	-	3297	21	NNC	ENSMUSG00000020923.18	novel	3013	20	NA	NA	-499	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	270.051920933734	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	7862	False	NA	-9	True	NA	NA	NA	102211067	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207295_102210145_102210419_102210937
ES.6461.84	chr11	-	3060	21	NNC	ENSMUSG00000020923.18	novel	2759	21	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	232.301802618921	790	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8195	False	NA	-9	True	NA	NA	NA	102208472	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198103_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ES.6461.85	chr11	-	3244	18	NIC	ENSMUSG00000020923.18	novel	3013	20	NA	NA	-12	0	intron_retention	FALSE	canonical	3	144	junction_12	163.592793472465	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9124	False	NA	-9	True	NA	NA	NA	102207543	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ES.6461.86	chr11	-	2973	20	NNC	ENSMUSG00000020923.18	novel	3013	20	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	227.579677685181	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8324	False	NA	-9	True	NA	NA	NA	102208343	102196818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208269
ES.6461.93	chr11	-	2541	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	355	40	-291	-40	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTACCCTCCAGACTTC	8716	False	NA	NA	False	NA	NA	NA	102210213	102197351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ES.6462.1	chr11	+	230	1	Intergenic	novelGene_5200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCTTATGCTAATCCCA	NA	False	NA	NA	False	NA	NA	NA	102230863	102231093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102230900_102231100
ES.6463.1	chr11	-	205	1	Intergenic	novelGene_5196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTGGGGTACTA	8519	False	NA	NA	False	AAAAAG	-5	NA	102216278	102216073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102216100_102216300
ES.6463.2	chr11	-	178	2	Intergenic	novelGene_5197	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	101	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102258228	102216100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102216227_102258176
ES.6463.3	chr11	-	238	1	Intergenic	novelGene_5198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATTTATTTGTAAGC	9695	False	NA	NA	False	NA	NA	NA	102220451	102220213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102220200_102220500
ES.6463.4	chr11	-	1937	1	Intergenic	novelGene_5199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	6105	False	NA	NA	False	NA	NA	NA	102224041	102222104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102222100_102224000
ES.6463.5	chr11	-	3738	14	ISM	ENSMUSG00000006574.16	ENSMUST00000006749.10	4545	20	6745	-4	2033	4	3prime_fragment	FALSE	canonical	0	0	junction_3	0.92946507489189	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGCTTGAAGTCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	102249361	102239645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102241194_102241927_102242102_102242182_102242353_102243264_102243519_102244016_102244184_102244649_102244740_102245091_102245263_102246902_102247098_102247205_102247355_102247542_102247756_102247866_102248078_102248748_102248931_102249043_102249126_102249229
ES.6464.1	chr11	+	4711	2	Intergenic	novelGene_5201	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTGTTTCAAGTTTCC	5992	False	NA	NA	False	NA	NA	NA	102268238	102273682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102268769_102269501
ES.6464.2	chr11	+	1125	3	Intergenic	novelGene_5202	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	5997	False	NA	NA	False	NA	NA	NA	102268243	102270254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102268343_102268495_102268769_102269501
ES.6464.3	chr11	+	1023	1	Intergenic	novelGene_5203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	6028	False	NA	NA	False	NA	NA	NA	102268274	102269297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102268300_102269300
ES.6465.1	chr11	+	205	1	Intergenic	novelGene_5204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGAACTCTCAGCTCA	3659	False	NA	NA	False	NA	NA	NA	102280478	102280683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102280500_102280700
ES.6466.1	chr11	+	2026	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	19	1	19	-1	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTCATCTGTTGGAG	7428	False	NA	13	True	AATAAA	-15	NA	102284247	102293380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.11	chr11	+	2027	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	115	-2	intron_retention	FALSE	canonical	3	171	junction_6	30.4233503564874	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7524	False	NA	12	True	AATAAA	-14	NA	102284343	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.13	chr11	+	1700	11	NNC	ENSMUSG00000006575.15	novel	1837	11	NA	NA	121	-4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	74.4075936984929	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTTGGGGAGACAGAG	7530	False	NA	7	True	NA	NA	NA	102284349	102292576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.14	chr11	+	1763	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	123	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	73.6625606363652	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7532	False	NA	12	True	AATAAA	-14	NA	102284351	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102291486_102291625_102291719_102291827_102292806
ES.6466.15	chr11	+	2041	8	NIC	ENSMUSG00000006575.15	novel	1822	11	NA	NA	135	-2	intron_retention	FALSE	canonical	3	27	junction_2	90.3991150399162	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGGGAGACAGAGAC	7544	False	NA	9	True	NA	NA	NA	102284363	102292578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.17	chr11	+	1699	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107102.8	1837	11	136	2	136	-2	multi-exon	FALSE	canonical	3	49	junction_10	57.4930430573996	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGGGAGACAGAGAC	7545	False	NA	9	True	NA	NA	NA	102284364	102292578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.19	chr11	+	1803	10	NIC	ENSMUSG00000006575.15	novel	1837	11	NA	NA	139	-2	intron_retention	FALSE	canonical	3	49	junction_9	59.9370039662014	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGGGAGACAGAGAC	7548	False	NA	9	True	NA	NA	NA	102284367	102292578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.2	chr11	+	2129	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	22	-2	intron_retention	FALSE	canonical	3	182	junction_1	28.2204723866982	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7431	False	NA	12	True	AATAAA	-14	NA	102284250	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.20	chr11	+	2714	9	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	148	-2	intron_retention	FALSE	canonical	3	38	junction_2	65.2053247442262	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7557	False	NA	12	True	AATAAA	-14	NA	102284376	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.21	chr11	+	2594	9	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	157	-2	intron_retention	FALSE	canonical	3	27	junction_2	70.1208777754529	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7566	False	NA	12	True	AATAAA	-14	NA	102284385	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102291625_102291719_102291827_102292806
ES.6466.22	chr11	+	2077	9	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	157	-2	intron_retention	FALSE	canonical	3	27	junction_2	70.0352589771752	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7566	False	NA	12	True	AATAAA	-14	NA	102284385	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.23	chr11	+	2133	9	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	158	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	89.8769123579577	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7567	False	NA	12	True	AATAAA	-14	NA	102284386	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289290_102290020_102290111_102290208_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.24	chr11	+	1953	10	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	158	-2	intron_retention	FALSE	canonical	0	0	junction_7	73.9541065563178	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7567	False	NA	12	True	AATAAA	-14	NA	102284386	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291526_102291625_102291719_102291827_102292806
ES.6466.25	chr11	+	3121	8	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	158	-4	intron_retention	FALSE	canonical	3	182	junction_1	30.1939310025666	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGTTTCATCTGTTG	7567	False	NA	10	True	AATAAA	-12	NA	102284386	102293377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102289060_102289202_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.26	chr11	+	1760	10	NIC	ENSMUSG00000006575.15	novel	1837	11	NA	NA	172	-3	intron_retention	FALSE	canonical	3	49	junction_9	60.510992777458	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTTGGGGAGACAGAGA	7581	False	NA	8	True	NA	NA	NA	102284400	102292577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.28	chr11	+	2061	9	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	188	-2	intron_retention	FALSE	canonical	3	182	junction_1	27.8542523683548	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7597	False	NA	12	True	AATAAA	-14	NA	102284416	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.29	chr11	+	1729	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	234	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	74.0246872400529	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7643	False	NA	12	True	AATAAA	-14	NA	102284462	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.3	chr11	+	2046	11	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	22	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	68.3318373819993	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7431	False	NA	12	True	AATAAA	-14	NA	102284250	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291462_102291625_102291719_102291827_102292806
ES.6466.30	chr11	+	1756	11	NNC	ENSMUSG00000006575.15	novel	1878	8	NA	NA	-607	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.4489176637938	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	2876	False	NA	12	True	AATAAA	-14	NA	102288082	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102288175_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.31	chr11	+	1734	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	-378	-2	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	66.4747236841861	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	3105	False	NA	12	True	AATAAA	-14	NA	102288311	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.32	chr11	+	1749	10	ISM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	4085	0	-376	0	3prime_fragment	FALSE	canonical	3	171	junction_6	29.8663690461362	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	3107	False	NA	14	True	AATAAA	-16	NA	102288313	102293381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.33	chr11	+	1802	9	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	-336	-2	intron_retention	FALSE	canonical	3	38	junction_1	66.5577756539384	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	3147	False	NA	12	True	AATAAA	-14	NA	102288353	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.34	chr11	+	1254	9	NNC	ENSMUSG00000006575.15	novel	1861	11	NA	NA	-290	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	91.9509889832622	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGGGAGACAGAGAC	3193	False	NA	9	True	NA	NA	NA	102288399	102292578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102291526_102291625_102291719_102291827_102292214
ES.6466.35	chr11	+	1914	8	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	-285	-2	intron_retention	FALSE	canonical	3	187	junction_4	28.7039782494855	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	3198	False	NA	12	True	AATAAA	-14	NA	102288404	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.37	chr11	+	2551	7	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	-255	-2	intron_retention	FALSE	canonical	3	38	junction_1	74.6547609555702	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	3228	False	NA	12	True	AATAAA	-14	NA	102288434	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102288513_102288922_102289060_102289202_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.38	chr11	+	1619	9	NNC	ENSMUSG00000006575.15	novel	1837	11	NA	NA	-255	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	106.344957567343	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGGGAGACAGAGACA	3228	False	NA	10	True	NA	NA	NA	102288434	102292579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102288513_102288877_102289060_102289202_102289289_102290020_102290290_102290370_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ES.6466.39	chr11	+	2217	5	NIC	ENSMUSG00000006575.15	novel	1878	8	NA	NA	258	-4	intron_retention	FALSE	canonical	3	201	junction_4	23.3291662945764	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGTTTCATCTGTTG	3996	False	NA	10	True	AATAAA	-12	NA	102289202	102293377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102289289_102290020_102290290_102290440_102291625_102291719_102291827_102292806
ES.6466.4	chr11	+	1938	9	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	26	-2	intron_retention	FALSE	canonical	0	0	junction_6	95.7815711658563	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7435	False	NA	12	True	AATAAA	-14	NA	102284254	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102291491_102291625_102291719_102291827_102292806
ES.6466.40	chr11	+	2095	5	NIC	ENSMUSG00000006575.15	novel	1017	7	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	187	junction_1	27.4499544626216	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	4754	False	NA	12	True	AATAAA	-14	NA	102289960	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102290111_102290208_102290290_102290440_102291625_102291719_102291827_102292806
ES.6466.42	chr11	+	957	2	ISM	ENSMUSG00000006575.15	ENSMUST00000142157.8	866	5	1137	474	843	-2	internal_fragment	FALSE	canonical	3	260	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGGGGAGACAGAGAC	6320	False	NA	9	True	NA	NA	NA	102291526	102292578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102291625_102291719
ES.6466.5	chr11	+	2098	10	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	41	-2	intron_retention	FALSE	canonical	3	38	junction_2	62.99872622659	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7450	False	NA	12	True	AATAAA	-14	NA	102284269	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.6	chr11	+	1780	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107105.9	1861	11	77	4	77	-4	multi-exon	FALSE	canonical	2	8	junction_8	80.5806428368501	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTTGGGGAGACAGAG	7486	False	NA	7	True	NA	NA	NA	102284305	102292576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291462_102291625_102291719_102291827_102292214
ES.6466.7	chr11	+	1956	11	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	82	4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	60.3033166583729	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTGTTGGAGAGTGG	7491	False	NA	18	True	AATAAA	-20	NA	102284310	102293385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.8	chr11	+	2138	10	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	83	-2	intron_retention	FALSE	canonical	0	0	junction_6	73.7171772534884	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTCATCTGTTGGA	7492	False	NA	12	True	AATAAA	-14	NA	102284311	102293379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290370_102290872_102291486_102291625_102291719_102291827_102292806
ES.6466.9	chr11	+	1992	11	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	83	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.4301781908863	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGTTTCATCTGTTG	7492	False	NA	10	True	AATAAA	-12	NA	102284311	102293377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102284609_102288396_102288513_102288877_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ES.6467.1	chr11	-	2914	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-4	-1225	-4	1225	multi-exon	TRUE	canonical	3	4398	junction_3	174.765959202208	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTCAGCCTTTCTTTG	7684	False	NA	41	True	CATAAA	-26	NA	102298374	102292585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.10	chr11	-	1337	11	NIC	ENSMUSG00000018677.10	novel	1606	12	NA	NA	-1	2	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	1443.093583244	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7744	False	NA	97	True	NA	NA	NA	102298314	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.11	chr11	-	1479	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1375.31294109756	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7746	False	NA	97	True	NA	NA	NA	102298312	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294448_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.12	chr11	-	1392	11	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	1883.8947528989	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7725	False	NA	97	True	NA	NA	NA	102298333	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296636_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.13	chr11	-	1905	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	1	2	intron_retention	FALSE	canonical	3	4398	junction_3	175.70853707205	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7689	False	NA	97	True	NA	NA	NA	102298369	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.14	chr11	-	1448	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1377.32303538482	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	8291	False	NA	97	True	NA	NA	NA	102297767	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102297691
ES.6467.15	chr11	-	1485	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1375.31294109756	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7732	False	NA	97	True	NA	NA	NA	102298326	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294354_102294448_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.16	chr11	-	1457	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1375.31294109756	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7752	False	NA	97	True	NA	NA	NA	102298306	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294464_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.17	chr11	-	1580	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-39	2	combination_of_known_junctions	FALSE	canonical	3	113	junction_11	1345.10671179491	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7247	False	NA	97	True	NA	NA	NA	102298811	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298603
ES.6467.18	chr11	-	1460	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	1436.33615842532	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7708	False	NA	95	True	NA	NA	NA	102298350	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297187_102297248_102297380_102297481_102298215
ES.6467.19	chr11	-	1732	10	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	4398	junction_2	192.531671276298	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7727	False	NA	95	True	NA	NA	NA	102298331	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.2	chr11	-	2850	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	1174	combination_of_known_junctions	FALSE	canonical	3	102	junction_11	1348.24224715916	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCTTGAGACACTGTGT	7849	False	NA	-10	True	ATTAAA	-23	NA	102298209	102292636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298063
ES.6467.24	chr11	-	1605	11	FSM	ENSMUSG00000018677.10	ENSMUST00000153395.8	1564	11	-41	0	-3	0	multi-exon	FALSE	canonical	3	4398	junction_2	183.250211459632	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7685	False	NA	95	True	NA	NA	NA	102298373	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.25	chr11	-	1618	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	1375.04181754592	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	8159	False	NA	95	True	NA	NA	NA	102297899	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102297651
ES.6467.26	chr11	-	2208	10	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	11	0	intron_retention	FALSE	canonical	3	4398	junction_3	188.501563670365	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7787	False	NA	95	True	NA	NA	NA	102298271	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295746_102295837_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.28	chr11	-	1479	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1375.31294109756	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7721	False	NA	95	True	NA	NA	NA	102298337	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294349_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.29	chr11	-	1655	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	4398	junction_3	182.670085126164	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7727	False	NA	95	True	NA	NA	NA	102298331	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.3	chr11	-	2772	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	1	1169	combination_of_known_junctions	FALSE	canonical	3	141	junction_1	1393.56754052324	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCACAGGGCTTGAGACAC	7689	False	NA	-15	True	ATTAAA	-18	NA	102298369	102292641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.30	chr11	-	1470	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1380.16899192852	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7752	False	NA	95	True	NA	NA	NA	102298306	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295915_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.32	chr11	-	1469	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	1377.50809869978	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7727	False	NA	95	True	NA	NA	NA	102298331	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296636_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.33	chr11	-	1457	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-766	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	1377.32303538482	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	6520	False	NA	95	True	NA	NA	NA	102299538	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102299451
ES.6467.35	chr11	-	2453	10	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	4398	junction_3	179.302833699971	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7752	False	NA	95	True	NA	NA	NA	102298306	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.36	chr11	-	2846	8	ISM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	-18	160	-1	0	intron_retention	FALSE	canonical	3	4398	junction_3	207.15123135782	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7725	False	NA	95	True	NA	NA	NA	102298333	102293970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518
ES.6467.37	chr11	-	2069	9	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	4398	junction_3	192.787934010404	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGTGGCTGTAGTGT	7747	False	NA	94	True	NA	NA	NA	102298311	102293971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295906_102296518_102297077_102297187_102297481_102298215
ES.6467.38	chr11	-	1474	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1374.6672504962	1440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGTGGCTGTAGTGT	7725	False	NA	94	True	NA	NA	NA	102298333	102293971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297070_102297193_102297248_102297380_102297481_102298215
ES.6467.39	chr11	-	1465	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1361.11954406038	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCTGTGGCTGTAGTGT	7753	False	NA	94	True	NA	NA	NA	102298305	102293971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294973_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.4	chr11	-	3167	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	8	1168	intron_retention	FALSE	canonical	3	4398	junction_3	175.70853707205	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCACAGGGCTTGAGACA	7753	False	NA	-16	True	ATTAAA	-17	NA	102298305	102292642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.41	chr11	-	1737	10	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	9	-2	intron_retention	FALSE	canonical	3	4398	junction_3	189.983300110793	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCTGTGGCTGTAGTG	7754	False	NA	93	True	NA	NA	NA	102298304	102293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295746_102295837_102295906_102296518_102296653_102297031_102297248_102297380_102297481_102298215
ES.6467.42	chr11	-	1425	11	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1436.97884813939	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCTGTGGCTGTAGTG	7756	False	NA	93	True	NA	NA	NA	102298302	102293972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295766_102296500_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.45	chr11	-	3350	7	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	17	-95	intron_retention	FALSE	canonical	3	4398	junction_2	215.178995257437	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCATGTTTGTTATAGC	7705	False	NA	0	True	NA	NA	NA	102298353	102294065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102297077_102297187
ES.6467.46	chr11	-	1433	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-3	255	-3	-95	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCATGTTTGTTATAGC	7685	False	NA	0	True	NA	NA	NA	102298373	102294065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.5	chr11	-	1581	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	-47	151	-47	9	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTGTCTTGGGGTAC	7641	False	NA	NA	False	NA	NA	NA	102298417	102293961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.6	chr11	-	1533	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-12	5	combination_of_known_junctions	FALSE	canonical	3	102	junction_11	1348.24224715916	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTAGTGTCTTGGG	7837	False	NA	NA	False	NA	NA	NA	102298221	102293965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298063
ES.6467.8	chr11	-	1442	11	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	4	2	combination_of_known_junctions	FALSE	canonical	3	141	junction_1	1393.56754052324	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7692	False	NA	97	True	NA	NA	NA	102298366	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6467.9	chr11	-	1584	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1380.16899192852	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGGCTGTAGTGTCTT	7652	False	NA	97	True	NA	NA	NA	102298406	102293968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295927_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ES.6468.1	chr11	+	175	1	Intergenic	novelGene_5205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5887	False	NA	NA	False	NA	NA	NA	102301358	102301533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102301400_102301500
ES.6469.1	chr11	+	205	1	Intergenic	novelGene_5206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGATGCAAGGGACAG	NA	False	NA	NA	False	AAAAAG	-4	NA	102307134	102307339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102307100_102307300
ES.647.1	chr1	+	3473	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-546	-4	-23	0	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64729957	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.10	chr1	+	3413	10	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_9	46.635174559262	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730083	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64730560_64740127_64740203_64741504_64741540_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64761593_64761765_64762681
ES.647.11	chr1	+	3242	9	NIC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	103	0	intron_retention	FALSE	canonical	3	8	junction_3	34.7589916424513	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730083	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.12	chr1	+	3210	8	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	103	0	intron_retention	FALSE	canonical	0	0	junction_3	38.3842016821441	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64730083	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.13	chr1	+	3209	9	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	37.499791666088	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64730185	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.14	chr1	+	5000	7	ISM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	14794	-4	14794	0	3prime_fragment	FALSE	canonical	3	63	junction_2	18.6517797780504	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64745297	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.15	chr1	+	3826	2	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	18670	2439	intron_retention	TRUE	canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGTAGGAGAATGGAAG	NA	False	NA	NA	False	NA	NA	NA	64749173	64753051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64752733_64752784
ES.647.16	chr1	+	3999	1	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	25169	-3434	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	64755672	64759671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64755700_64759700
ES.647.17	chr1	+	5427	2	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	28224	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64758727	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64760949_64761593
ES.647.18	chr1	+	4164	2	ISM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	28399	0	28399	0	3prime_fragment	FALSE	canonical	3	114	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64758902	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_64760949_64762681
ES.647.19	chr1	+	3325	1	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	30975	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64761478	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64761500_64764800
ES.647.2	chr1	+	3127	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-536	332	-13	-332	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTATGTGCATTCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	64729967	64764467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.3	chr1	+	5029	1	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	4	-15599	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTGACAGCAACTCAT	NA	False	NA	NA	False	NA	NA	NA	64729984	64735013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64730000_64735000
ES.647.4	chr1	+	1939	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	-447	1431	76	263	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTTTTGTGGTGCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	64730056	64763368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.5	chr1	+	3256	10	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	94	0	intron_retention	FALSE	canonical	0	0	junction_7	35.7225246228776	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730074	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757385_64757457_64760785_64760949_64762681
ES.647.7	chr1	+	3423	11	NNC	ENSMUSG00000070871.11	novel	2923	10	NA	NA	100	0	intron_retention	FALSE	canonical	0	0	junction_1	43.8935074925666	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730080	64764799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_64730560_64734182_64734260_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.647.8	chr1	+	5007	9	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	100	0	intron_retention	FALSE	canonical	3	84	junction_4	13.2328898960129	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64730080	64764803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ES.6470.1	chr11	+	2154	13	NNC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-62	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	181.124266734196	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATCTGATTTGTTGCG	4272	False	NA	16	True	AATAAA	-18	NA	102321281	102327634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102321367_102323834_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.10	chr11	+	2177	13	NNC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	181.752502657384	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4323	False	NA	15	True	AATAAA	-17	NA	102321332	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325853_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.11	chr11	+	2361	12	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	528	junction_1	55.6675491921267	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4325	False	NA	15	True	AATAAA	-17	NA	102321334	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326769_102326849_102327075_102327160
ES.6470.12	chr11	+	2820	10	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	528	junction_1	58.7764125025224	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTATCTGATTTGTT	4325	False	NA	13	True	AATAAA	-15	NA	102321334	102327631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326769_102326849_102327075_102327160
ES.6470.13	chr11	+	4568	12	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-9	0	intron_retention	FALSE	canonical	3	581	junction_5	45.6110034571005	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4325	False	NA	15	True	AATAAA	-17	NA	102321334	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.14	chr11	+	5216	8	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-9	-2	intron_retention	FALSE	canonical	3	581	junction_4	44.4343129041657	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTATCTGATTTGTT	4325	False	NA	13	True	AATAAA	-15	NA	102321334	102327631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325983_102326071_102326769_102326849
ES.6470.15	chr11	+	5425	6	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	591	junction_2	45.9982608366882	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATAGTATCTGATTTG	4325	False	NA	11	True	AATAAA	-13	NA	102321334	102327629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102324177_102324311_102324397_102324761_102324872_102324967_102325336_102325528_102326769_102326849
ES.6470.16	chr11	+	2668	10	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	2	-3	intron_retention	FALSE	canonical	3	528	junction_1	60.1937201925357	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAGTATCTGATTTGT	4336	False	NA	12	True	AATAAA	-14	NA	102321345	102327630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102326769_102326849_102327075_102327160
ES.6470.17	chr11	+	3493	6	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	528	junction_1	67.0182064815226	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4336	False	NA	15	True	AATAAA	-17	NA	102321345	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102325983_102326071_102326769_102326849_102327075_102327160
ES.6470.18	chr11	+	2755	9	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	2	-2	intron_retention	FALSE	canonical	3	528	junction_1	55.9977678126548	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTATCTGATTTGTT	4336	False	NA	13	True	AATAAA	-15	NA	102321345	102327631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102326769_102326849
ES.6470.19	chr11	+	5403	7	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	591	junction_3	46.434242632877	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4343	False	NA	15	True	AATAAA	-17	NA	102321352	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102326769_102326849_102327075_102327160
ES.6470.2	chr11	+	3143	7	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-62	0	intron_retention	FALSE	canonical	3	528	junction_1	61.2410991265035	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4272	False	NA	15	True	AATAAA	-17	NA	102321281	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102325983_102326071_102326769_102326849
ES.6470.20	chr11	+	4573	8	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	715	-2	intron_retention	FALSE	canonical	3	581	junction_5	51.7186264950125	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTATCTGATTTGTT	5049	False	NA	13	True	AATAAA	-15	NA	102322058	102327631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102326769_102326849_102327075_102327160
ES.6470.21	chr11	+	2119	12	NNC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	186.655735610679	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTATCTGATTTGTTG	6779	False	NA	14	True	AATAAA	-16	NA	102323788	102327632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327081_102327160
ES.6470.22	chr11	+	1759	9	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	3611	0	1	0	3prime_fragment	FALSE	canonical	3	581	junction_2	45.0416473943838	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	7749	False	NA	15	True	AATAAA	-17	NA	102324758	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.23	chr11	+	1963	7	NIC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-81	0	intron_retention	FALSE	canonical	3	581	junction_1	48.7954915950234	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	7834	False	NA	15	True	AATAAA	-17	NA	102324843	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102325104_102325225_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.3	chr11	+	2188	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	143	0	-53	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4281	False	NA	15	True	AATAAA	-17	NA	102321290	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.4	chr11	+	4858	10	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-53	-4	intron_retention	FALSE	canonical	3	581	junction_3	44.9611629391357	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATAGTATCTGATTTG	4281	False	NA	11	True	AATAAA	-13	NA	102321290	102327629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.6	chr11	+	5213	9	NNC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-44	0	intron_retention	FALSE	canonical	0	0	junction_4	214.066578428301	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4290	False	NA	15	True	AATAAA	-17	NA	102321299	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325889_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.7	chr11	+	2337	13	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	-42	-2	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	173.891309443572	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTATCTGATTTGTT	4292	False	NA	13	True	AATAAA	-15	NA	102321301	102327631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102321529_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.8	chr11	+	2136	13	NNC	ENSMUSG00000034708.13	novel	2331	13	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	183.057064569737	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4294	False	NA	15	True	AATAAA	-17	NA	102321303	102327633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325567_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ES.6470.9	chr11	+	6159	3	NIC	ENSMUSG00000034708.13	novel	845	4	NA	NA	-39	-3	intron_retention	FALSE	canonical	3	695	junction_1	10	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAGTATCTGATTTGT	4295	False	NA	12	True	AATAAA	-14	NA	102321304	102327630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102326769_102326849_102327075_102327160
ES.6471.1	chr11	-	3111	8	FSM	ENSMUSG00000034685.5	ENSMUST00000049057.5	3118	8	7	0	7	0	multi-exon	FALSE	canonical	3	9	junction_1	3.01695886884898	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	-4	True	AATACA	-18	NA	102338501	102327806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102329736_102330257_102330385_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
ES.6471.2	chr11	-	2970	9	NNC	ENSMUSG00000034685.5	novel	3118	8	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.54385921538417	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	-4	True	AATACA	-18	NA	102338497	102327806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102328616_102328752_102329736_102330257_102330385_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
ES.6471.3	chr11	-	2972	9	NNC	ENSMUSG00000034685.5	novel	3118	8	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.54385921538417	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	-4	True	AATACA	-18	NA	102338496	102327806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102328622_102328755_102329736_102330257_102330385_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
ES.6472.1	chr11	-	167	1	Intergenic	novelGene_5207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	9129	False	NA	NA	False	NA	NA	NA	102341061	102340894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102340900_102341100
ES.6473.1	chr11	+	1982	2	Antisense	novelGene_ENSMUSG00000034664.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGACCTAGTTGTTATA	NA	False	NA	NA	False	AATAAA	-13	NA	102346672	102349464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102347193_102348002
ES.6474.1	chr11	-	2607	21	NIC	ENSMUSG00000034664.14	novel	3437	30	NA	NA	1216	-5	intron_retention	FALSE	canonical	0	0	junction_4	1.54515371403624	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGCCATGCTGCCTTG	8683	False	NA	NA	False	AATAAA	-14	NA	102356565	102344134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102344344_102346389_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102355978_102356130_102356184_102356322_102356377_102356536
ES.6474.2	chr11	-	3439	27	NIC	ENSMUSG00000034664.14	novel	3437	30	NA	NA	-605	-7	intron_retention	FALSE	canonical	0	0	junction_4	1.65205627653189	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCGCCATGCTGCCT	6618	False	NA	NA	False	AATAAA	-12	NA	102358630	102344136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102344344_102346389_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348386_102348597_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102356184_102356322_102356377_102356536_102356581_102356715_102357212_102357302_102357349_102357879_102357930_102358152_102358316_102358418_102358517_102358605
ES.6474.3	chr11	-	3368	25	ISM	ENSMUSG00000034664.14	ENSMUST00000103086.4	3437	30	2706	1447	22	1095	internal_fragment	FALSE	canonical	0	0	junction_3	1.45714237083714	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGATCTATGGGTAATTT	7245	False	NA	NA	False	NA	NA	NA	102358003	102345569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348386_102348597_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102355978_102356130_102356184_102356322_102356377_102356536_102356581_102356715_102356764_102357082_102357212_102357302_102357349_102357879
ES.6475.1	chr11	+	179	1	Intergenic	novelGene_5208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGATCCTTCTCT	469	False	NA	NA	False	NA	NA	NA	102361658	102361837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102361700_102361800
ES.6476.1	chr11	+	2879	1	Antisense	novelGene_ENSMUSG00000034621.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCTAAAAGAAGGACTAAA	NA	False	NA	NA	False	NA	NA	NA	102427698	102430577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102427700_102430600
ES.6477.1	chr11	+	131	1	Intergenic	novelGene_5210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACCCAAAAAAAAA	3718	False	NA	NA	False	NA	NA	NA	102440245	102440376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102440200_102440400
ES.6478.1	chr11	+	766	1	Intergenic	novelGene_5211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2669	False	NA	NA	False	NA	NA	NA	102443285	102444051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102443300_102444100
ES.6479.1	chr11	-	7029	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	-154	-4	39	4	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTGTTGTGATTGC	483	False	NA	1	True	AATAAA	-22	NA	102447179	102366736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ES.6479.10	chr11	-	6432	4	NIC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	40	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	66.9178600972864	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTAGTGGAGTCTGTT	700	False	NA	-7	True	AATAAA	-14	NA	102446962	102366744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102372914_102378325_102378457_102429107_102429183_102446905
ES.6479.11	chr11	-	6572	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	56	243	33	-243	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGCTTCTCGTTAGGT	693	False	NA	NA	False	AATAAA	-17	NA	102446969	102366983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ES.6479.12	chr11	-	2928	9	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	25	106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.6671747943864	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTGC	685	False	NA	1	True	TATAAA	-16	NA	102446977	102367926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102368740_102371448_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ES.6479.17	chr11	-	1420	2	NNC	ENSMUSG00000034621.15	novel	5597	6	NA	NA	28900	102	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTTTGTTTTGT	NA	False	NA	-3	True	TATAAA	-12	NA	102370373	102367930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102369209_102370231
ES.6479.19	chr11	-	5792	11	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	26	26	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	75.4467361785783	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGACTAAGCATGTAT	686	False	NA	-7	True	AATAAA	-23	NA	102446976	102368006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102401042_102401088_102411823_102411898_102412137_102412255_102418919_102418993_102429107_102429183_102446905
ES.6479.2	chr11	-	7021	8	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	65	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.8802423023573	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTGTTGTGATTGC	509	False	NA	1	True	AATAAA	-22	NA	102447153	102366736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102419011_102429107_102429183_102446905
ES.6479.21	chr11	-	177	1	Intergenic	novelGene_5209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATGCATAG	NA	False	NA	NA	False	NA	NA	NA	102385033	102384856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102384900_102385000
ES.6479.22	chr11	-	614	7	NNC	ENSMUSG00000034621.15	novel	390	6	NA	NA	34	10081	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	77.2040945949256	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAACTTTCTAAGTGTA	694	False	NA	NA	False	AATAAA	-15	NA	102446968	102388238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102388336_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429100_102429183_102446905
ES.6479.23	chr11	-	1400	4	NIC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	32	7727	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	83.2626366785647	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAGTGTAATAGAAGTT	692	False	NA	NA	False	ATTAAA	-32	NA	102446970	102390592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102391773_102398268_102398356_102398969_102399038_102446905
ES.6479.24	chr11	-	1022	6	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	36	7187	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	67.9311416067771	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACATCAAGCCACTTTG	696	False	NA	NA	False	AATAAA	-18	NA	102446966	102391132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102391773_102398268_102398356_102398969_102399038_102418919_102419011_102429107_102429183_102446905
ES.6479.3	chr11	-	6846	8	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	39	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.0835406421579	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTGTTGTGATTGC	699	False	NA	1	True	AATAAA	-22	NA	102446963	102366736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398389_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ES.6479.4	chr11	-	6750	7	NIC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	26	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	60.2368012283373	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGAGTCTGTTGTGAT	686	False	NA	-2	True	AATAAA	-19	NA	102446976	102366739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102429107_102429183_102446905
ES.6479.5	chr11	-	5057	8	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.9409582445511	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGAGTCTGTTGTGA	692	False	NA	-3	True	AATAAA	-18	NA	102446970	102366740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102371157_102378345_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102419011_102429107_102429183_102446905
ES.6479.6	chr11	-	6890	9	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.1654492864754	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGAGTCTGTTGTGA	675	False	NA	-3	True	AATAAA	-18	NA	102446987	102366740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102427915_102427973_102429107_102429183_102446905
ES.6479.7	chr11	-	4850	10	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	66.3589193163926	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGAGTCTGTTGTGA	638	False	NA	-3	True	AATAAA	-18	NA	102447024	102366740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102367372_102367754_102369411_102371047_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ES.6479.8	chr11	-	6906	10	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	72.5595540841376	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTGGAGTCTGTTG	691	False	NA	-6	True	AATAAA	-15	NA	102446971	102366743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102411823_102411898_102418919_102418993_102422138_102422157_102429107_102429183_102446905
ES.6479.9	chr11	-	6855	8	NNC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	41	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.1130172647019	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTGGAGTCTGTTG	701	False	NA	-6	True	AATAAA	-15	NA	102446961	102366743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398389_102398969_102399038_102418919_102419011_102429107_102429183_102446905
ES.648.1	chr1	-	2787	1	Genic_Genomic	ENSMUSG00000045005.10	novel	NA	NA	NA	NA	5874	1469	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTTCTCCCCATTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	64771034	64768247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_64768200_64771000
ES.648.10	chr1	-	2956	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	-6	-55	-4	55	multi-exon	FALSE	canonical	3	23	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTTTTAT	NA	False	NA	-5	True	AATATA	-14	NA	64776914	64773572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776398
ES.648.11	chr1	-	2959	3	NNC	ENSMUSG00000045005.10	novel	6915	2	NA	NA	10	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTTTTAT	NA	False	NA	-5	True	AATATA	-14	NA	64776898	64773572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64776013_64776291_64776399_64776486
ES.648.2	chr1	-	7991	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	-13	-1063	-13	1063	multi-exon	FALSE	canonical	3	55	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGGAGAGAAAAGTCG	NA	False	NA	NA	False	AATAAA	-20	NA	64776923	64768653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776291
ES.648.3	chr1	-	6958	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	-43	0	-43	0	multi-exon	FALSE	canonical	3	55	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGAGTCTTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	64776953	64769716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776291
ES.648.4	chr1	-	4712	2	NNC	ENSMUSG00000045005.10	novel	6915	2	NA	NA	1874	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGAGTCTTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	64775034	64769716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64771910_64772515
ES.648.5	chr1	-	2366	2	NNC	ENSMUSG00000045005.10	novel	6915	2	NA	NA	4456	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGGCGTTGAGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	64772452	64769718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64771919_64772286
ES.648.6	chr1	-	5766	3	NNC	ENSMUSG00000045005.10	novel	6915	2	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	27.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAGGCGTTGAGTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	64776910	64769719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_64771910_64773055_64776013_64776291
ES.648.7	chr1	-	6801	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	2	-3908	2	-3	multi-exon	FALSE	canonical	3	23	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAGGCGTTGAGTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	64776906	64769719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776398
ES.648.8	chr1	-	3454	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	149	3312	147	599	multi-exon	FALSE	canonical	3	55	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATTTCAGTAAAAATAA	NA	False	NA	NA	False	AATAAA	-11	NA	64776761	64773028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776291
ES.648.9	chr1	-	3128	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	-68	3855	-68	56	multi-exon	FALSE	canonical	3	55	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTATA	NA	False	NA	-4	True	AATATA	-15	NA	64776978	64773571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64776013_64776291
ES.6480.1	chr11	-	162	1	Intergenic	novelGene_5212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	102448747	102448585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102448600_102448700
ES.6481.1	chr11	-	716	3	NIC	ENSMUSG00000078640.10	novel	818	3	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTCTTTTTTTTT	-2	True	NA	NA	False	NA	NA	NA	102470156	102467223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102467624_102469575_102469722_102469986
ES.6481.2	chr11	-	826	3	FSM	ENSMUSG00000078640.10	ENSMUST00000107081.8	818	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	9	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTCTTTTTTTTT	8230	False	NA	NA	False	NA	NA	NA	102470295	102467223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102467624_102469575_102469722_102470015
ES.6481.3	chr11	-	1007	4	NIC	ENSMUSG00000078640.10	novel	796	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	2.16024689946929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTCTTTTTTTTT	8230	False	NA	NA	False	NA	NA	NA	102470295	102467223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102467624_102467724_102467906_102469575_102469722_102470015
ES.6481.4	chr11	-	795	3	NNC	ENSMUSG00000078640.10	novel	796	4	NA	NA	305	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTGCTTCTTTTTTT	8885	False	NA	NA	False	NA	NA	NA	102469640	102467225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102467624_102467724_102468057_102469575
ES.6481.5	chr11	-	1091	5	NNC	ENSMUSG00000078640.10	novel	796	4	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.78535710713571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTTGCTTCTTTTTTT	8247	False	NA	NA	False	NA	NA	NA	102470278	102467225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102467624_102467724_102467906_102469575_102469722_102469813_102469917_102470015
ES.6482.1	chr11	+	178	1	Intergenic	novelGene_5213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAATTGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	102484214	102484392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102484200_102484400
ES.6483.1	chr11	+	3693	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	-33	3	-33	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATCTAGCTCTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	102495188	102498881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102495200_102498900
ES.6483.2	chr11	+	2179	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	8	1476	8	-1476	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTATTTTTAGGTCGC	NA	False	NA	NA	False	AATAAA	-18	NA	102495229	102497408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102495200_102497400
ES.6484.1	chr11	+	159	1	Intergenic	novelGene_5214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	102532676	102532835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102532700_102532800
ES.6485.1	chr11	+	160	1	Intergenic	novelGene_5215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAATAAATCATTAAA	NA	False	NA	NA	False	NA	NA	NA	102534091	102534251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102534100_102534300
ES.6486.1	chr11	+	260	1	Intergenic	novelGene_5216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	102543755	102544015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102543800_102544000
ES.6486.2	chr11	+	153	1	Intergenic	novelGene_5217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	102543757	102543910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102543800_102543900
ES.6487.1	chr11	+	4718	8	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-202	3	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.6999904634709	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	6	True	AATAAA	-16	NA	102556211	102573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.10	chr11	+	4478	9	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-32	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.4762522609218	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	6	True	AATAAA	-16	NA	102556381	102573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102565031_102565100_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.11	chr11	+	6358	7	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-32	3	intron_retention	FALSE	canonical	3	21	junction_1	5.21749194749951	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	6	True	AATAAA	-16	NA	102556381	102573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.12	chr11	+	4341	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	-17	249	-17	-249	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTAGATGATGTGCG	NA	False	NA	NA	False	ATTAAA	-25	NA	102556396	102572814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.13	chr11	+	2809	8	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	12.0881118864607	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556410	102573063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102566631_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.2	chr11	+	3671	6	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-72	2555	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	11.5654658358408	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGGCATTTTGATAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	102556341	102568689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559
ES.6487.3	chr11	+	4646	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	-70	-3	-70	3	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	6	True	AATAAA	-16	NA	102556343	102573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.4	chr11	+	4647	8	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.2557774797298	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556363	102573063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556657_102557161_102557312_102559127_102559286_102562985_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.5	chr11	+	4491	7	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-50	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	13.2623108427185	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTTTCATTTTTTAC	NA	False	NA	6	True	AATAAA	-16	NA	102556363	102573066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102570757_102570939_102571335
ES.6487.6	chr11	+	4385	6	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-47	2746	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	12.9769025580067	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTGCATATGTTTTTT	NA	False	NA	NA	False	AATATA	-16	NA	102556366	102568880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566853_102567186
ES.6487.7	chr11	+	3792	6	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-42	2133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.9769025580067	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTCTGAATATTGGGG	NA	False	NA	NA	False	AATAAA	-18	NA	102556371	102568267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556657_102557161_102557312_102559127_102559286_102562985_102563115_102564864_102566854_102567186
ES.6487.8	chr11	+	4034	8	NNC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.0881118864607	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556379	102573063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102565437_102566738_102567559_102567695_102570757_102570939_102571335
ES.6487.9	chr11	+	6296	7	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	-33	0	intron_retention	FALSE	canonical	3	7	junction_1	10.2089285540757	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556380	102573063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102566738_102567559_102567695_102570757_102570939_102571335
ES.6488.1	chr11	-	3147	1	Antisense	novelGene_ENSMUSG00000051455.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACATGAACTATTT	6258	False	NA	NA	False	NA	NA	NA	102573269	102570122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_102570100_102573300
ES.6489.1	chr11	-	2429	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	-60	-3	-60	3	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCTTGTTCTTTCCA	NA	False	NA	-1	True	AATAAA	-19	NA	102588668	102575508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.10	chr11	-	2282	5	NNC	ENSMUSG00000020925.17	novel	2316	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	239.593405585379	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTTCTGTCTTGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	102588535	102575513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102577323_102579626_102579678_102581027_102581163_102582936_102583025_102588336
ES.6489.12	chr11	-	1968	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	66	332	18	-330	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGAACAGTTTCTCTG	NA	False	NA	NA	False	AATAAA	-42	NA	102588542	102575843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.13	chr11	-	1713	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	7	646	7	-644	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTGTGTTAGGCTGA	NA	False	NA	0	True	NA	NA	NA	102588601	102576157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.14	chr11	-	1593	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-180	-1006	18	-646	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATTTTGTGTTAGGCT	NA	False	NA	-2	True	NA	NA	NA	102588542	102576159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
ES.6489.15	chr11	-	1038	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	49	1279	1	375	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAATTGCTTCTGAGGC	NA	False	NA	NA	False	TTTAAA	-6	NA	102588559	102576790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.16	chr11	-	852	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	48	1466	0	188	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGGGCAGTCAATTAT	NA	False	NA	NA	False	NA	NA	NA	102588560	102576977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.17	chr11	-	995	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	-7	1	-7	-1	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGGCTTCTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	102588567	102579145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
ES.6489.2	chr11	-	4627	4	NNC	ENSMUSG00000020925.17	novel	989	4	NA	NA	-7	2	intron_retention	FALSE	non_canonical	0	0	junction_1	247.015968894501	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTCTTGTTCTTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	102588567	102575509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102579686_102581026_102581163_102582940_102583025_102588336
ES.6489.4	chr11	-	2295	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-232	-1656	14	2	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGTCTTGTTCTTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	102588594	102575509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
ES.6489.6	chr11	-	4652	3	NNC	ENSMUSG00000020925.17	novel	2366	5	NA	NA	5397	0	intron_retention	FALSE	non_canonical	0	0	junction_1	301	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102582965	102575511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102579999_102581026_102581163_102582936
ES.649.1	chr1	-	203	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTGAAAAACCACCATCC	NA	False	NA	NA	False	NA	NA	NA	64789762	64789559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64789600_64789800
ES.6490.1	chr11	+	181	1	Intergenic	novelGene_5218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	102647739	102647920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102647700_102647900
ES.6491.1	chr11	+	5305	26	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-25	0	intron_retention	TRUE	canonical	3	16	junction_1	5.06754378372797	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	32	True	ATTAAA	-43	NA	102652239	102671088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.10	chr11	+	5107	26	FSM	ENSMUSG00000020926.17	ENSMUST00000068150.7	5102	26	-3	-2	-3	2	multi-exon	FALSE	canonical	2	11	junction_6	5.6661803712907	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCTCTCCTCTCTCTCT	NA	False	NA	34	True	ATTAAA	-45	NA	102652261	102671090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.12	chr11	+	5380	25	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-2	0	intron_retention	FALSE	canonical	3	16	junction_1	4.88176169248584	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	32	True	ATTAAA	-43	NA	102652262	102671088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.13	chr11	+	4675	23	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	143	567	intron_retention	FALSE	canonical	0	0	junction_7	7.01238573660978	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGTGATTCTGGGGC	NA	False	NA	16	True	AATAAA	-20	NA	102652407	102669860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.14	chr11	+	4632	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	152	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	7.06925738674155	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCATGTCTCTCCTCT	NA	False	NA	28	True	ATTAAA	-39	NA	102652416	102671084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668948
ES.6491.15	chr11	+	5344	25	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	158	0	intron_retention	FALSE	canonical	0	0	junction_7	7.08174001687909	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	32	True	ATTAAA	-43	NA	102652422	102671088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662808_102662870_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.16	chr11	+	4859	25	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-47	-2	intron_retention	FALSE	canonical	0	0	junction_7	7.39885501652489	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	30	True	ATTAAA	-41	NA	102652964	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.17	chr11	+	3491	19	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	178	565	intron_retention	FALSE	non_canonical	0	0	junction_9	7.48248984770361	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAAGGGTGATTCTGGG	9343	False	NA	14	True	AATAAA	-18	NA	102662485	102669858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665454_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.18	chr11	+	4565	20	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	254	-2	intron_retention	FALSE	canonical	0	0	junction_11	7.56431335714597	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	9419	False	NA	30	True	ATTAAA	-41	NA	102662561	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665833_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.19	chr11	+	4295	19	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	560	-2	intron_retention	FALSE	canonical	0	0	junction_1	7.70201192249927	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	9725	False	NA	30	True	ATTAAA	-41	NA	102662867	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102662935_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.2	chr11	+	5322	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_17	7.03659008327187	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCATGTCTCTCCTCT	NA	False	NA	28	True	ATTAAA	-39	NA	102652241	102671084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665833_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.20	chr11	+	3905	12	ISM	ENSMUSG00000020926.17	ENSMUST00000103081.10	4620	27	12608	2	-34	-2	intron_retention	FALSE	canonical	3	24	junction_1	2.36713028478028	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	30	True	ATTAAA	-41	NA	102664872	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.21	chr11	+	3776	11	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	4	-2	intron_retention	FALSE	canonical	2	2	junction_10	8.48763806956918	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	30	True	ATTAAA	-41	NA	102664910	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102668456
ES.6491.22	chr11	+	1907	5	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-486	567	intron_retention	FALSE	canonical	0	0	junction_1	12.8646803302686	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGTGATTCTGGGGC	1271	False	NA	16	True	AATAAA	-20	NA	102666893	102669860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102666992_102667324_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.3	chr11	+	4783	22	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-19	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	7.47452210683891	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	30	True	ATTAAA	-41	NA	102652245	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102662770_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.5	chr11	+	5208	25	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-16	-2	intron_retention	FALSE	canonical	2	11	junction_6	5.71896819559457	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCATGTCTCTCCTCTCT	NA	False	NA	30	True	ATTAAA	-41	NA	102652248	102671086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.6	chr11	+	5099	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-9	0	intron_retention	FALSE	non_canonical	0	0	junction_11	7.37932246212347	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTCTCTCCTCTCTCT	NA	False	NA	32	True	ATTAAA	-43	NA	102652255	102671088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663816_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.7	chr11	+	4060	26	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-6	569	intron_retention	FALSE	canonical	3	16	junction_1	5.06754378372797	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGATTCTGGGGCTG	NA	False	NA	18	True	AATAAA	-22	NA	102652258	102669862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.8	chr11	+	3836	26	NNC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	-6	566	intron_retention	FALSE	canonical	0	0	junction_6	6.99759958843031	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTGATTCTGGGG	NA	False	NA	15	True	AATAAA	-19	NA	102652258	102669859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662783_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6491.9	chr11	+	3882	26	FSM	ENSMUSG00000020926.17	ENSMUST00000068150.7	5102	26	-6	1226	-6	569	multi-exon	FALSE	canonical	2	11	junction_6	5.6661803712907	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGATTCTGGGGCTG	NA	False	NA	18	True	AATAAA	-22	NA	102652258	102669862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662740_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
ES.6492.1	chr11	+	178	1	Intergenic	novelGene_5219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATATTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	102686210	102686388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102686200_102686400
ES.6493.1	chr11	+	3494	5	Antisense	novelGene_ENSMUSG00000034520.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACAGCAGAGCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	102688968	102709254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102689040_102689240_102692025_102693669_102693743_102695106_102695341_102708922
ES.6493.2	chr11	+	5165	1	Intergenic	novelGene_5222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACAGCAGAGCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	102704089	102709254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102704100_102709300
ES.6494.1	chr11	-	5329	5	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	8	3535	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	322.485658595851	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGAGTGAAGTCCCAC	NA	False	NA	NA	False	AATAAA	-23	NA	102709997	102686869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102700471_102700572_102709795
ES.6494.10	chr11	-	4335	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-8	2452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	317.031149889092	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTTTAAGCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	102710044	102687952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102695106_102695339_102709885
ES.6494.11	chr11	-	4199	5	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	55	2452	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	322.485658595851	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTTTAAGCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	102709950	102687952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689035_102689235_102692022_102693666_102693743_102700471_102700572_102709795
ES.6494.12	chr11	-	4131	4	NNC	ENSMUSG00000034520.15	novel	1890	3	NA	NA	8	2450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.774638261016	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTGGTTTAAGCTG	NA	False	NA	NA	False	AATAAA	-45	NA	102710518	102687954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102710329
ES.6494.13	chr11	-	4056	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	6	2450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	354.928474797701	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTGGTTTAAGCTG	NA	False	NA	NA	False	AATAAA	-45	NA	102709999	102687954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102709885
ES.6494.15	chr11	-	4545	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-130	2450	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	303.020110718744	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTGGTTTAAGCTG	NA	False	NA	NA	False	AATAAA	-45	NA	102710166	102687954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102695106_102695339_102709795
ES.6494.18	chr11	-	4288	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	4	2448	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	317.031149889092	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAATGTCTGGTTTAAGC	NA	False	NA	NA	False	AATAAA	-43	NA	102710001	102687956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689048_102689248_102692022_102693666_102693743_102695106_102695339_102709885
ES.6494.19	chr11	-	4389	6	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-9	2437	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	295.221001962936	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGACTCTGTCAATGT	NA	False	NA	NA	False	AATAAA	-32	NA	102710014	102687967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689036_102689237_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709885
ES.6494.2	chr11	-	5229	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	7	3535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	323.820251923124	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGAGTGAAGTCCCAC	NA	False	NA	NA	False	AATAAA	-23	NA	102709998	102686869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689048_102689249_102692022_102693666_102693743_102709795
ES.6494.20	chr11	-	4054	4	NNC	ENSMUSG00000034520.15	novel	1890	3	NA	NA	57	2422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	361.774638261016	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCATGCTAATAAAATAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	102710469	102687982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689048_102689248_102692022_102693666_102693743_102710329
ES.6494.22	chr11	-	6656	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-1242	2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	336.706928285647	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGTCATGCTAATA	NA	False	NA	NA	False	AATAAA	-9	NA	102697856	102687990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689048_102689248_102692022_102693666_102693743_102695106
ES.6494.24	chr11	-	4325	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-187	2406	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	323.820251923124	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGATTTAAAAAGAAGTCA	NA	False	NA	NA	False	AATAAA	-1	NA	102710223	102687998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689041_102689242_102692022_102693666_102693743_102709795
ES.6494.25	chr11	-	2714	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	7	-818	7	818	multi-exon	FALSE	canonical	3	506	junction_2	138	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCCATCTTTAATC	NA	False	NA	NA	False	CATAAA	-18	NA	102709998	102689586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709795
ES.6494.26	chr11	-	2622	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	36	-2411	5	814	multi-exon	FALSE	canonical	3	62	junction_2	360	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTCTTTCCATCTTT	NA	False	NA	NA	False	CATAAA	-14	NA	102710000	102689590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709885
ES.6494.27	chr11	-	2953	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	4	812	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	310.068540809931	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102710001	102689592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709885
ES.6494.28	chr11	-	3069	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	9	812	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	305.092096751129	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102710027	102689592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709795
ES.6494.29	chr11	-	3713	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-15	812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	368.402859199907	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102710020	102689592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102696473_102696582_102708920
ES.6494.3	chr11	-	5451	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	8	3525	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	303.020110718744	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTGTAGCTGGGAGT	NA	False	NA	NA	False	AATAAA	-13	NA	102709997	102686879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102695106_102695339_102709795
ES.6494.30	chr11	-	3526	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	424	812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	315.853902144647	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102709581	102689592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102708892
ES.6494.31	chr11	-	2852	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	5	812	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTTTCTTTCCATCT	NA	False	NA	NA	False	CATAAA	-12	NA	102710000	102689592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
ES.6494.33	chr11	-	2759	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	40	664	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTAAAATGGGTCTGA	NA	False	NA	NA	False	NA	NA	NA	102709965	102689740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
ES.6494.34	chr11	-	2746	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-248	-595	-217	595	multi-exon	FALSE	canonical	3	506	junction_2	138	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATACTCAAAGTTACTT	NA	False	NA	NA	False	NA	NA	NA	102710253	102689809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709795
ES.6494.35	chr11	-	2157	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	5	-259	5	259	multi-exon	FALSE	canonical	3	506	junction_2	138	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTTTCCAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	102710000	102690145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709795
ES.6494.36	chr11	-	2737	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	480	107	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	315.081239524031	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAAGATCTATCTATAG	NA	False	NA	-1	True	NA	NA	NA	102709525	102690297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102708920
ES.6494.37	chr11	-	2509	3	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	373	104	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	383.5	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTTAAGATCTATCTA	NA	False	NA	-4	True	NA	NA	NA	102709632	102690300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102708920
ES.6494.38	chr11	-	2037	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-30	-104	1	104	multi-exon	FALSE	canonical	3	506	junction_2	138	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTTAAGATCTATCTA	NA	False	NA	-4	True	NA	NA	NA	102710035	102690300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709795
ES.6494.39	chr11	-	2483	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-213	104	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTTAAGATCTATCTA	NA	False	NA	-4	True	NA	NA	NA	102710249	102690300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
ES.6494.4	chr11	-	5192	5	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	23	3413	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	322.485658595851	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGCTGGTCATTTTG	NA	False	NA	NA	False	TATAAA	-14	NA	102709982	102686991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102700471_102700572_102709795
ES.6494.40	chr11	-	1985	3	NNC	ENSMUSG00000034520.15	novel	1890	3	NA	NA	7	104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	391	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTTTAAGATCTATCTA	NA	False	NA	-4	True	NA	NA	NA	102710519	102690300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693741_102710329
ES.6494.42	chr11	-	1991	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	23	101	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	347.835529461203	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGGTTTAAGATCTAT	NA	False	NA	-7	True	NA	NA	NA	102709982	102690303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709885
ES.6494.43	chr11	-	2513	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-146	101	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	305.092096751129	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGGTTTAAGATCTAT	NA	False	NA	-7	True	NA	NA	NA	102710182	102690303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709795
ES.6494.44	chr11	-	2161	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-15	101	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGGTTTAAGATCTAT	NA	False	NA	-7	True	NA	NA	NA	102710020	102690303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
ES.6494.45	chr11	-	3588	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	-1173	-101	-286	101	multi-exon	FALSE	canonical	3	164	junction_2	309	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGGTTTAAGATCTAT	833	False	NA	-7	True	NA	NA	NA	102696900	102690303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102695106
ES.6494.46	chr11	-	2119	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	15	100	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	340.826446548191	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAGGTTTAAGATCTA	NA	False	NA	-8	True	NA	NA	NA	102710021	102690304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709795
ES.6494.48	chr11	-	1839	3	FSM	ENSMUSG00000034520.15	ENSMUST00000131164.2	247	3	9	-1601	9	4	multi-exon	FALSE	canonical	3	62	junction_2	360	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAGGGTAATGTTATT	NA	False	NA	-4	True	ATTAAA	-26	NA	102710027	102690400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709885
ES.6494.49	chr11	-	3100	7	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	285.193891161006	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102709765	102690404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102699722_102699766_102700471_102700572_102703783_102703971_102708920
ES.6494.5	chr11	-	4278	2	NNC	ENSMUSG00000034520.15	novel	3413	2	NA	NA	4116	3272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTGCTGGTTGTTTTGG	6122	False	NA	NA	False	TATAAA	-44	NA	102691611	102687132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237
ES.6494.50	chr11	-	9065	2	FSM	ENSMUSG00000034520.15	ENSMUST00000155089.2	3413	2	-4500	-1152	-4500	0	multi-exon	FALSE	canonical	3	782	junction_1	0	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102701114	102690404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666
ES.6494.51	chr11	-	2404	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-240	-2	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	300.941854849072	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGTTAAAGGGTAAT	NA	False	NA	-10	True	ATTAAA	-20	NA	102710276	102690406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709795
ES.6494.52	chr11	-	1910	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	-22	2	-22	-2	multi-exon	FALSE	canonical	3	30	junction_2	376	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCTGTTAAAGGGTAAT	NA	False	NA	-10	True	ATTAAA	-20	NA	102710548	102690406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102710329
ES.6494.53	chr11	-	5250	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	-2939	3	-2052	-3	multi-exon	FALSE	canonical	3	164	junction_2	309	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTGTTAAAGGGTAA	NA	False	NA	-11	True	ATTAAA	-19	NA	102698666	102690407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102695106
ES.6494.54	chr11	-	2846	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	354.710523604186	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTGTTAAAGGGTAA	NA	False	NA	-11	True	ATTAAA	-19	NA	102709976	102690407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102708920
ES.6494.55	chr11	-	2094	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	-195	4	-164	-4	multi-exon	FALSE	canonical	3	506	junction_2	138	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTCTGTTAAAGGGTA	NA	False	NA	-12	True	ATTAAA	-18	NA	102710200	102690408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102692022_102693666_102693743_102709795
ES.6494.56	chr11	-	2114	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-85	-5	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	340.826446548191	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGTTAAAGGGT	NA	False	NA	-13	True	ATTAAA	-17	NA	102710121	102690409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709795
ES.6494.57	chr11	-	2793	3	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	383.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710026	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102708920
ES.6494.58	chr11	-	2142	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	-147	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	368.402859199907	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710183	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102705908_102706066_102709885
ES.6494.59	chr11	-	1865	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	365.154153140226	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710000	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102708920_102708984_102709885
ES.6494.6	chr11	-	4177	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	-81	2454	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	354.928474797701	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTTTAAGCTGTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	102710117	102687950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689044_102689245_102692022_102693666_102693743_102709885
ES.6494.60	chr11	-	2227	5	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	305.092096751129	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710003	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102709795
ES.6494.61	chr11	-	1983	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	67.6609192961491	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102709994	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102691887_102693666_102693743_102695106_102695339_102709795
ES.6494.62	chr11	-	2079	5	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	330.545760825941	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710008	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102696473_102696553_102700471_102700572_102709795
ES.6494.63	chr11	-	1871	3	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	391	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102709986	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693745_102709804
ES.6494.64	chr11	-	2038	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	328.11515593699	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710004	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102709885
ES.6494.65	chr11	-	2085	4	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	336.706928285647	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710495	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102710329
ES.6494.68	chr11	-	2000	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	62	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	342.993035238651	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102709943	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695173_102695339_102709795
ES.6494.69	chr11	-	1909	4	NNC	ENSMUSG00000034520.15	novel	247	3	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	347.835529461203	587	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710007	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102700471_102700572_102709885
ES.6494.70	chr11	-	2246	6	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	298.585599116903	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	False	NA	-14	True	ATTAAA	-16	NA	102710033	102690410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102696473_102696553_102700471_102700572_102709885
ES.6494.71	chr11	-	2396	6	NNC	ENSMUSG00000034520.15	novel	2314	3	NA	NA	-12	-8	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	298.794645199676	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATAATGTCTGTTAAAG	NA	False	NA	-16	True	ATTAAA	-14	NA	102710017	102690412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102692022_102693666_102693743_102695106_102695339_102700471_102700572_102705908_102706066_102709795
ES.6494.73	chr11	-	7673	2	Intergenic	novelGene_5220	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGTACAATAGTTACTGC	NA	False	NA	NA	False	NA	NA	NA	102707362	102699628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102702748_102702808
ES.6494.74	chr11	-	174	1	Intergenic	novelGene_5221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	498	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	102700789	102700615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102700600_102700800
ES.6494.75	chr11	-	7009	1	NIC	ENSMUSG00000034520.15	novel	1890	3	NA	NA	30	-11486	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTCTGTTCCTCTAA	NA	False	NA	NA	False	NA	NA	NA	102710496	102703487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102703500_102710500
ES.6494.8	chr11	-	4203	5	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	1	2454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	338.471841517134	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTTTAAGCTGTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	102710004	102687950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102708892_102708941_102709795
ES.6494.9	chr11	-	4400	4	NNC	ENSMUSG00000034520.15	novel	1903	3	NA	NA	-213	2454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	323.820251923124	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTTTAAGCTGTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	102710249	102687950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102689037_102689237_102692022_102693666_102693743_102709795
ES.6495.1	chr11	+	221	1	Intergenic	novelGene_5223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACTCAGGGGG	4745	False	NA	NA	False	NA	NA	NA	102715089	102715310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102715100_102715300
ES.6496.1	chr11	+	4853	1	Genic_Genomic	ENSMUSG00000020928.15	novel	NA	NA	NA	NA	123	2784	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	102726797	102731650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_102726800_102731600
ES.6497.1	chr11	+	2877	6	Antisense	novelGene_ENSMUSG00000020929.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102736377	102746548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102737062_102737409_102737519_102738779_102740137_102742581_102742721_102745606_102745695_102746048
ES.6498.1	chr11	-	3560	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	-232	-4	-214	4	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGCTGCTTTCGTTC	8234	False	NA	-1	True	TATAAA	-26	NA	102772025	102729294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.10	chr11	-	3889	26	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-2	0	intron_retention	FALSE	canonical	3	142	junction_24	269.149160132444	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8496	False	NA	-5	True	TATAAA	-22	NA	102771763	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.13	chr11	-	3294	28	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	367.054153654032	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8459	False	NA	-5	True	TATAAA	-22	NA	102771800	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730908_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.15	chr11	-	3459	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	7	0	intron_retention	FALSE	canonical	3	142	junction_25	264.902161798359	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8476	False	NA	-5	True	TATAAA	-22	NA	102771783	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.16	chr11	-	3265	27	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	377.093713338015	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8496	False	NA	-5	True	TATAAA	-22	NA	102771763	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756490_102759408_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.17	chr11	-	3125	27	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	2	13	junction_6	374.979914649482	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8467	False	NA	-5	True	TATAAA	-22	NA	102771792	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732069_102732563_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.21	chr11	-	3353	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	448.708767798268	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTTGGTTTGCTGCTT	8467	False	NA	-7	True	TATAAA	-20	NA	102771792	102729300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732350_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742755_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.22	chr11	-	3578	26	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-5093	0	intron_retention	FALSE	canonical	0	0	junction_21	399.846998738267	1512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	NA	False	NA	-9	True	TATAAA	-18	NA	102761888	102729302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102758784_102758898_102759412_102759479_102759920_102759997_102760993_102761073_102761845
ES.6498.24	chr11	-	3314	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	371.4129880359	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8460	False	NA	-9	True	TATAAA	-18	NA	102771799	102729302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102761005_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.3	chr11	-	4374	27	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_21	376.6362252278	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTGCTGCTTTCGTT	8497	False	NA	-2	True	TATAAA	-25	NA	102771762	102729295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102758784_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.32	chr11	-	4747	14	ISM	ENSMUSG00000020929.15	ENSMUST00000173679.8	2889	27	25613	-323	-4122	-1	intron_retention	FALSE	canonical	3	1277	junction_11	97.4469359469234	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	NA	False	NA	-10	True	TATAAA	-17	NA	102742927	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009
ES.6498.38	chr11	-	3690	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	370.333542613462	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8488	False	NA	-10	True	TATAAA	-17	NA	102771771	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731602_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.4	chr11	-	4245	26	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	10	2	intron_retention	FALSE	canonical	3	142	junction_24	268.887622623281	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTGCTGCTTTCGT	8479	False	NA	-3	True	TATAAA	-24	NA	102771780	102729296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.41	chr11	-	3289	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	371.73174244365	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8488	False	NA	-10	True	TATAAA	-17	NA	102771771	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738791_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.45	chr11	-	3293	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	289.083827865911	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8481	False	NA	-10	True	TATAAA	-17	NA	102771778	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768446_102768545_102771720
ES.6498.49	chr11	-	3296	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	371.73174244365	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8500	False	NA	-10	True	TATAAA	-17	NA	102771759	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738772_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.50	chr11	-	3308	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	289.083827865911	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8470	False	NA	-10	True	TATAAA	-17	NA	102771789	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762005_102768435_102768545_102771720
ES.6498.51	chr11	-	3156	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-10	-1	combination_of_known_splicesites	FALSE	canonical	2	33	junction_10	373.064861026262	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8488	False	NA	-10	True	TATAAA	-17	NA	102771771	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.53	chr11	-	3487	29	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	382.216032713524	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8467	False	NA	-10	True	TATAAA	-17	NA	102771792	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102767021_102767191_102768435_102768545_102771720
ES.6498.57	chr11	-	3232	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	367.454365278757	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	8466	False	NA	-10	True	TATAAA	-17	NA	102771793	102729303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730908_102731139_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.60	chr11	-	4354	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	142	junction_25	269.130016862355	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTGCCTTGGTTTGC	8461	False	NA	-12	True	TATAAA	-15	NA	102771798	102729305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.61	chr11	-	3281	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	371.456141818822	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTGCCTTGGTTTGC	8470	False	NA	-12	True	TATAAA	-15	NA	102771789	102729305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771752
ES.6498.62	chr11	-	3187	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	371.472094708036	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTGCCTTGGTTTGC	8509	False	NA	-12	True	TATAAA	-15	NA	102771750	102729305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740096_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.67	chr11	-	3315	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	367.454365278757	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTGCCTTGGTTTGC	8489	False	NA	-12	True	TATAAA	-15	NA	102771770	102729305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730966_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.69	chr11	-	3282	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	369.617033853525	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTCTGCCTTGGTTTGC	8490	False	NA	-12	True	TATAAA	-15	NA	102771769	102729305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755606_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.70	chr11	-	5281	25	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_19	384.083107326179	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTCTGCCTTGGTTTG	8503	False	NA	-13	True	TATAAA	-14	NA	102771756	102729306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102756487_102758671_102758708_102758784_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.71	chr11	-	3300	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	369.701418101085	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACCTCTGCCTTGGTTT	8487	False	NA	-14	True	TATAAA	-13	NA	102771772	102729307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732090_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.72	chr11	-	3206	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	15	103	12	-99	multi-exon	FALSE	canonical	3	142	junction_26	264.162864923118	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAACCCTAAGGGGCCT	8481	False	NA	-108	True	NA	NA	NA	102771778	102729401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.73	chr11	-	2736	23	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	28	2357	-4	-619	5prime_fragment	FALSE	canonical	3	142	junction_21	283.970348964305	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	8494	False	NA	NA	False	AATACA	-17	NA	102771765	102731655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.74	chr11	-	1290	11	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	29	21281	-3	2857	5prime_fragment	FALSE	canonical	3	142	junction_9	407.799227561799	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGTGTGTGTTCACGC	8495	False	NA	NA	False	AATAAA	-22	NA	102771764	102750579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.75	chr11	-	2066	9	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	22	24926	-10	466	5prime_fragment	FALSE	canonical	3	142	junction_7	441.596942216542	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	8488	False	NA	NA	False	NA	NA	NA	102771771	102754224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.8	chr11	-	3788	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	4	0	intron_retention	FALSE	canonical	3	142	junction_25	268.382201192925	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8452	False	NA	-5	True	TATAAA	-22	NA	102771807	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102729723_102729975_102730084_102730245_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6498.9	chr11	-	3300	28	NNC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	447.721348648538	1513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8487	False	NA	-5	True	TATAAA	-22	NA	102771772	102729298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736918_102737057_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ES.6499.1	chr11	+	1324	5	NNC	ENSMUSG00000020930.10	novel	1841	5	NA	NA	-16	-185	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACACTTTATGTGTA	NA	False	NA	NA	False	NA	NA	NA	102772054	102775164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102772528_102773177_102773258_102773370_102773523_102773899_102774033_102774678
ES.65.1	chr1	-	227	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATCCCAGCACTTGGG	1051	False	NA	NA	False	NA	NA	NA	9781286	9781059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9781100_9781300
ES.650.1	chr1	+	160	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64799859	64800019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_64799900_64800000
ES.6500.1	chr11	+	4457	2	Antisense	novelGene_ENSMUSG00000051378.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAAGGGA	NA	False	NA	NA	False	NA	NA	NA	102797375	102801868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102800866_102800901
ES.6501.1	chr11	-	8724	16	FSM	ENSMUSG00000020932.15_ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	18	-5416	-18	5416	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTTTTCTGGTTTCT	3742	False	NA	NA	False	ATTAAA	-15	NA	102815932	102790938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.10	chr11	-	3539	17	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	105.920297275829	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGGAAAGTTAGTGCT	3760	False	NA	-7	True	AATAAA	-32	NA	102815914	102796354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815293_102815543_102815808
ES.6501.11	chr11	-	3383	15	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	261	junction_10	30.1249947074261	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGGAAAGTTAGTGC	3744	False	NA	-8	True	AATAAA	-31	NA	102815930	102796355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.12	chr11	-	3593	15	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-8	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	84.2980923114334	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGGAAAGTTAGTGC	3752	False	NA	-8	True	AATAAA	-31	NA	102815922	102796355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797111_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806527_102807014_102807342_102815808
ES.6501.14	chr11	-	4026	15	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	4	junction_14	83.0806099827273	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGGAAAGTTAGTGC	3757	False	NA	-8	True	AATAAA	-31	NA	102815917	102796355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815293
ES.6501.16	chr11	-	3543	15	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	261	junction_9	30.5166398235856	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGGAAAGTTAGTGC	3725	False	NA	-8	True	AATAAA	-31	NA	102815949	102796355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.2	chr11	-	5315	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	65	-2054	29	2054	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCTGAGTTTCTCCTG	3789	False	NA	NA	False	AATAAA	-11	NA	102815885	102794300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.21	chr11	-	3488	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.8406955017802	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCTGGAAAGTTAGTG	3742	False	NA	-9	True	AATAAA	-30	NA	102815932	102796356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102798085_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.22	chr11	-	4141	14	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	261	junction_9	32.6815366871983	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCTGGAAAGTTAGTG	3756	False	NA	-9	True	AATAAA	-30	NA	102815918	102796356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102807342_102815808
ES.6501.23	chr11	-	3345	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	83.4741210728744	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCTGGAAAGTTAGTG	3744	False	NA	-9	True	AATAAA	-30	NA	102815930	102796356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805294_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.24	chr11	-	3427	17	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	107.463783870428	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTCTGGAAAGTTAGTG	3755	False	NA	-9	True	AATAAA	-30	NA	102815919	102796356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102801252_102801387_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.27	chr11	-	3204	15	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	86.6624050495923	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACTCTGGAAAGTTAGT	3727	False	NA	-10	True	AATAAA	-29	NA	102815947	102796357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.28	chr11	-	3943	15	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-16	-9	intron_retention	FALSE	canonical	0	0	junction_5	114.023091109312	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTCTACACTCTGGAAA	3744	False	NA	-16	True	AATAAA	-23	NA	102815930	102796363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102801252_102801387_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102806527_102807014_102807342_102815808
ES.6501.29	chr11	-	3301	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	17	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0250368281945	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTCCTTCTACACT	3741	False	NA	-23	True	AATAAA	-16	NA	102815933	102796370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797111_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.3	chr11	-	4649	16	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	6	814	intron_retention	FALSE	canonical	1	4	junction_15	82.2717448459676	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTAGCACATGTGTGAG	3730	False	NA	NA	False	NA	NA	NA	102815944	102795540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815293
ES.6501.30	chr11	-	2958	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	0	368	0	-368	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGGGGACTCTTGGGCT	3724	False	NA	-4	True	ATTAAA	-41	NA	102815950	102796722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.31	chr11	-	2920	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	6	-379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	83.4080731504251	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCCACAGAAGCAGGGG	3730	False	NA	-15	True	ATTAAA	-30	NA	102815944	102796733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806389_102806527_102807014_102807342_102815808
ES.6501.32	chr11	-	2911	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-14	-392	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	83.4741210728744	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTCCCAAAGCCTTCC	3746	False	NA	-28	True	ATTAAA	-17	NA	102815928	102796746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805548_102805626_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.34	chr11	-	2872	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	32	-394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	82.0250368281945	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCATTCCCAAAGCCTT	3792	False	NA	-30	True	ATTAAA	-15	NA	102815882	102796748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797111_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.35	chr11	-	2907	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	3	-411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	82.938263519051	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATCCTGTCAGGGTTT	3727	False	NA	31	True	NA	NA	NA	102815947	102796765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799456_102799708_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.36	chr11	-	2977	17	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-18	-412	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	124.312044368195	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGATCCTGTCAGGGTT	3742	False	NA	30	True	NA	NA	NA	102815932	102796766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803746_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102811604_102811687_102815808
ES.6501.38	chr11	-	2791	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	7	-428	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	81.6165560546524	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTGGCTGTATTAAA	3731	False	NA	14	True	NA	NA	NA	102815943	102796782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806427_102807014_102807342_102815808
ES.6501.39	chr11	-	3309	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-5	-430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.8406955017802	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGTGGCTGTATTA	3755	False	NA	12	True	NA	NA	NA	102815919	102796784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102798347_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.4	chr11	-	3371	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	-34	-11	-34	11	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGCTGATTTTTCTTT	3690	False	NA	4	True	AATAAA	-43	NA	102815984	102796343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.40	chr11	-	5847	9	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-7	-466	intron_retention	FALSE	canonical	3	261	junction_4	35.257756238876	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTCTTGGTATATACA	3753	False	NA	-24	True	NA	NA	NA	102815921	102796820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102799919_102803179_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806527_102807014_102807342_102815808
ES.6501.41	chr11	-	3664	14	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	7	-466	intron_retention	FALSE	canonical	3	261	junction_8	33.7398680825052	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTCTTGGTATATACA	3731	False	NA	-24	True	NA	NA	NA	102815943	102796820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.43	chr11	-	3056	17	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-18	-498	combination_of_known_junctions	FALSE	canonical	1	4	junction_15	104.811270118008	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCCTTCTTTATTAG	3742	False	NA	-1	True	NA	NA	NA	102815932	102796852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815293_102815540_102815808
ES.6501.44	chr11	-	2824	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	0	502	0	-502	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTATTTGCCTTCTTTA	3724	False	NA	-5	True	NA	NA	NA	102815950	102796856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.45	chr11	-	3025	15	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-18	-502	intron_retention	FALSE	canonical	3	261	junction_9	30.5166398235856	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTATTTGCCTTCTTTA	3742	False	NA	-5	True	NA	NA	NA	102815932	102796856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.46	chr11	-	2776	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-3	-508	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	83.4741210728744	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTTGTCTATTTGCCT	3757	False	NA	-11	True	NA	NA	NA	102815917	102796862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805554_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.47	chr11	-	5450	1	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-5	-3158	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATTAGAATCTTAGTA	3755	False	NA	NA	False	NA	NA	NA	102815919	102810469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102810500_102815900
ES.6501.48	chr11	-	3403	1	Intergenic	novelGene_5224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTACCAAATGACTACAG	5049	False	NA	NA	False	NA	NA	NA	102814625	102811222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102811200_102814600
ES.6501.5	chr11	-	3866	16	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-17	8	intron_retention	FALSE	canonical	1	4	junction_15	82.2717448459676	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTAGTGCTGATTTTTC	3707	False	NA	1	True	AATAAA	-40	NA	102815967	102796346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815293
ES.6501.6	chr11	-	4003	14	NIC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-7	8	intron_retention	FALSE	canonical	3	261	junction_8	33.4184514813042	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTAGTGCTGATTTTTC	3753	False	NA	1	True	AATAAA	-40	NA	102815921	102796346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799919_102803179_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ES.6501.8	chr11	-	3383	17	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-4	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	106.551557356052	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTAGTGCTGATTTTT	3756	False	NA	0	True	AATAAA	-39	NA	102815918	102796347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102811604_102811687_102815808
ES.6501.9	chr11	-	3200	16	NNC	ENSMUSG00000051378.11	novel	3326	16	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	81.6165560546524	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTAGTGCTGATTTT	3756	False	NA	-1	True	AATAAA	-38	NA	102815918	102796348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806427_102807014_102807342_102815808
ES.6502.1	chr11	+	158	1	Intergenic	novelGene_5225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102817836	102817994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102817800_102818000
ES.6503.1	chr11	+	182	1	Intergenic	novelGene_5226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACATTTAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	102819021	102819203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102819000_102819200
ES.6504.1	chr11	-	5017	1	Genic_Genomic	ENSMUSG00000045532.6	novel	NA	NA	NA	NA	2416	8	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGTGCCCTGGGGAA	NA	False	NA	-2	True	AATAAA	-24	NA	102835098	102830081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_102830100_102835100
ES.6504.2	chr11	-	1605	3	NNC	ENSMUSG00000045532.6	novel	1473	2	NA	NA	-57	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCAGTCTGTGCCCTGGG	8602	False	NA	-5	True	AATAAA	-21	NA	102837571	102830084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102830739_102834787_102834858_102836690
ES.6504.3	chr11	-	1559	2	FSM	ENSMUSG00000045532.6	ENSMUST00000057849.6	1473	2	-87	1	-87	-1	multi-exon	FALSE	canonical	3	27	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGATTTCAGTCTGTGC	8572	False	NA	-11	True	AATAAA	-15	NA	102837601	102830090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102830739_102836690
ES.6505.1	chr11	-	189	1	Intergenic	novelGene_5227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTACACGCCTCATA	NA	False	NA	NA	False	AATAAA	-13	NA	102866919	102866730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102866700_102866900
ES.6506.1	chr11	+	2136	1	Intergenic	novelGene_5228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCGCACAATGCGCCAAC	8785	False	NA	NA	False	TTTAAA	-22	NA	102905549	102907685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102905500_102907700
ES.6507.1	chr11	-	1776	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-21	-11	-21	11	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCCTTTGTTCACACT	8172	False	NA	6	True	NA	NA	NA	102908015	102884861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ES.6507.10	chr11	-	824	5	NNC	ENSMUSG00000020935.9	novel	430	3	NA	NA	-16	5279	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12.5772612281053	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTAAAGTGTGGTAT	6003	False	NA	NA	False	AATAAA	-16	NA	102919105	102912534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102912910_102916051_102916177_102916252_102916284_102918085_102918248_102918974
ES.6507.2	chr11	-	3903	4	NIC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	22	1	intron_retention	FALSE	canonical	3	1121	junction_1	35.1220095603249	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATTCCACTTGGCCTT	8215	False	NA	-4	True	NA	NA	NA	102907972	102884871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102888267_102890469_102890674_102890975_102891183_102907875
ES.6507.3	chr11	-	1930	6	NIC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	536.12147877137	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	5991	False	NA	-5	True	NA	NA	NA	102919117	102884872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102918085_102918248_102918974
ES.6507.4	chr11	-	6047	3	NIC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	78	0	intron_retention	FALSE	canonical	3	1131	junction_1	34.5	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGAATTCCACTTGGC	8271	False	NA	-7	True	NA	NA	NA	102907916	102884874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102890674_102890975_102891183_102907875
ES.6507.5	chr11	-	2700	5	NNC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	499.180828958805	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGAATTCCACTTGGC	8197	False	NA	-7	True	NA	NA	NA	102907990	102884874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102886961_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ES.6507.8	chr11	-	1594	5	NNC	ENSMUSG00000020935.9	novel	1744	5	NA	NA	44	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	486.863623101994	499	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAATGTCCACTGAATT	8237	False	NA	-16	True	NA	NA	NA	102907950	102884883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891088_102907875
ES.6507.9	chr11	-	2465	4	ISM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	37	1422	37	-1420	5prime_fragment	FALSE	canonical	3	1121	junction_1	35.1220095603249	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTGTCCCAAGGAAAA	8230	False	NA	NA	False	AATAAA	-14	NA	102907957	102886294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_102888267_102890469_102890674_102890975_102891183_102907875
ES.6508.1	chr11	+	4781	13	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-14	1	combination_of_known_junctions	TRUE	canonical	3	7	junction_1	279.278534799938	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCCTGGTGTTCTTC	NA	False	NA	10	True	AATAAA	-17	NA	102919157	102959739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102919256_102919350_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.10	chr11	+	4656	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-34	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	450.517700370482	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTCTCCTGGTGTTC	NA	False	NA	7	True	AATAAA	-14	NA	102919376	102959736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946113_102947208_102947326_102948192_102948362_102949030_102949147_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.11	chr11	+	3770	9	ISM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	206	6078	-33	5350	5prime_fragment	FALSE	canonical	3	928	junction_6	48.4064820039631	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	102919377	102953660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903
ES.6508.16	chr11	+	4948	11	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-31	-2807	intron_retention	FALSE	canonical	3	928	junction_5	43.5058616740319	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATATTCTAAATATCT	NA	False	NA	14	True	AATAAA	-20	NA	102919379	102956931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102919529_102933993_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.18	chr11	+	6937	9	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-28	24437	intron_retention	FALSE	non_canonical	0	0	junction_8	339.582073106046	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTGTGGCTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	102919382	102984175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102919529_102933993_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102953688_102984132
ES.6508.2	chr11	+	4867	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	-6	0	-6	0	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919165	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.20	chr11	+	4655	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	292.853050335674	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919383	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955700_102956573
ES.6508.22	chr11	+	5595	8	ISM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	212	6011	-27	5417	intron_retention	FALSE	canonical	3	928	junction_6	51.7367749048104	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGTTAAAACAATTACTA	NA	False	NA	NA	False	NA	NA	NA	102919383	102953727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030
ES.6508.23	chr11	+	1940	13	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-26	-2808	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	376.534443975581	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAATATTCTAAATATC	NA	False	NA	13	True	AATAAA	-19	NA	102919384	102956930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102919529_102933993_102934103_102937001_102937102_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.29	chr11	+	5737	11	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	928	junction_5	42.3132366996428	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919388	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.3	chr11	+	1881	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	177	2803	-62	-2803	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTAAATATCTTTCA	NA	False	NA	18	True	AATAAA	-24	NA	102919348	102956935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.30	chr11	+	5524	11	ISM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	217	0	-22	0	intron_retention	FALSE	canonical	3	928	junction_6	45.2	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919388	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555
ES.6508.31	chr11	+	6525	1	Intergenic	novelGene_5229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACATGCTATGGCCTAGT	NA	False	NA	NA	False	NA	NA	NA	102920950	102927475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_102921000_102927500
ES.6508.32	chr11	+	3554	11	NNC	ENSMUSG00000020936.9	novel	449	3	NA	NA	14389	-2808	intron_retention	FALSE	canonical	3	21	junction_1	297.451239701569	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAATATTCTAAATATC	8178	False	NA	13	True	AATAAA	-19	NA	102933799	102956930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102933894_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.33	chr11	+	4568	12	NNC	ENSMUSG00000020936.9	novel	449	3	NA	NA	14419	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	285.378941927865	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	8208	False	NA	9	True	AATAAA	-16	NA	102933829	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102933894_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.34	chr11	+	1763	12	NNC	ENSMUSG00000020936.9	novel	449	3	NA	NA	14420	-2804	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	285.378941927865	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTAAATATCTTTC	8209	False	NA	17	True	AATAAA	-23	NA	102933830	102956934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102933894_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.35	chr11	+	3734	9	NNC	ENSMUSG00000020936.9	novel	449	3	NA	NA	14435	5417	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	329.529754916001	477	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGTTAAAACAATTACTA	8224	False	NA	NA	False	NA	NA	NA	102933845	102953727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102933894_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903
ES.6508.36	chr11	+	4563	11	ISM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	14763	0	14524	0	3prime_fragment	FALSE	canonical	3	928	junction_5	44.0146566498025	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	8313	False	NA	9	True	AATAAA	-16	NA	102933934	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.37	chr11	+	1626	11	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	15631	-2811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.021900853037	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATAAATATTCTAAAT	9420	False	NA	10	True	AATAAA	-16	NA	102935041	102956927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102935084_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.38	chr11	+	4416	11	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	15650	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.021900853037	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTCTCCTGGTGTTC	9439	False	NA	7	True	AATAAA	-14	NA	102935060	102959736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102935084_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.39	chr11	+	4132	8	ISM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	26851	0	26612	0	3prime_fragment	FALSE	canonical	3	928	junction_2	44.9598460306754	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102946022	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.4	chr11	+	1846	12	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-48	-2812	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	292.181082761987	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATAAATATTCTAAA	NA	False	NA	9	True	AATAAA	-15	NA	102919362	102956926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951061_102954631_102954802_102955555_102955694_102956573
ES.6508.40	chr11	+	1240	2	NNC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	38805	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102958215	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102958700_102958982
ES.6508.41	chr11	+	4284	1	Antisense	novelGene_ENSMUSG00000020937.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTTTTGCTGACCCTG	NA	False	NA	NA	False	AAAAAG	-12	NA	102959790	102964074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102959800_102964100
ES.6508.42	chr11	+	3003	1	Antisense	novelGene_ENSMUSG00000020937.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTCTGCCTTCCCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	102969176	102972179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_102969200_102972200
ES.6508.5	chr11	+	1646	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	203	3012	-36	-3012	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGCCAGCGAACTTGAC	NA	False	NA	NA	False	AAAACA	-20	NA	102919374	102956726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ES.6508.6	chr11	+	6422	11	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	-36	0	intron_retention	FALSE	canonical	3	928	junction_6	45.3414821107559	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919374	102959738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102951075_102954633_102954802_102955555_102955694_102956573
ES.6509.1	chr11	-	179	1	Intergenic	novelGene_5230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAAAACCCCACA	NA	False	NA	NA	False	NA	NA	NA	102931357	102931178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102931200_102931400
ES.651.1	chr1	+	2281	2	Antisense	novelGene_ENSMUSG00000051344.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATTCACCAGCTGAA	NA	False	NA	NA	False	AATACA	-43	NA	64886648	64889011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_64887543_64887624
ES.6510.1	chr11	-	478	1	Intergenic	novelGene_5231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102932019	102931541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102931500_102932000
ES.6511.1	chr11	-	3783	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	17	-777	17	777	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAAGGACTGGGATGG	9426	False	NA	NA	False	NA	NA	NA	102992467	102960352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
ES.6511.10	chr11	-	166	1	Intergenic	novelGene_5232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAATAAATAGATA	NA	False	NA	NA	False	NA	NA	NA	102974247	102974081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_102974100_102974200
ES.6511.3	chr11	-	3626	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	3803	762	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	7.81449464332866	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAAAAAGATTG	8995	False	NA	NA	False	NA	NA	NA	102988614	102960367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102988494
ES.6511.4	chr11	-	2901	15	NIC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	-11	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	8.90912167273474	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	9438	False	NA	NA	False	AGTAAA	-7	NA	102992455	102961124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968691_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
ES.6511.5	chr11	-	3019	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	9	-5	9	5	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	9418	False	NA	NA	False	AGTAAA	-7	NA	102992475	102961124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
ES.6511.6	chr11	-	2869	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	3803	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	7.81449464332866	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	8995	False	NA	NA	False	AGTAAA	-7	NA	102988614	102961124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102988494
ES.6511.7	chr11	-	2965	15	NNC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	-2774	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	8.3824403441032	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACCTTTCCACTTTATT	NA	False	NA	NA	False	AGTAAA	-7	NA	102971894	102961124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102971678
ES.6511.8	chr11	-	2651	12	NIC	ENSMUSG00000020937.15	novel	3023	15	NA	NA	-1957	-17	intron_retention	FALSE	canonical	3	17	junction_9	5.02390977441749	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	102971077	102961146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_102961756_102961835_102961986_102962080_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012
ES.6512.1	chr11	+	2076	10	FSM	ENSMUSG00000056938.17	ENSMUST00000092559.13	2083	10	7	0	1	0	multi-exon	FALSE	canonical	3	48	junction_2	33.6455746177417	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992514	103003026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.10	chr11	+	3704	6	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	107	junction_3	17.0411267233126	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992535	103003026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.11	chr11	+	5687	11	NNC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_9	55.6292189411284	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992542	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996148_102997126_102997184_102998622
ES.6512.12	chr11	+	2801	7	NIC	ENSMUSG00000056938.17	novel	1959	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	68	junction_1	27.8547821547556	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCTGTCTGGGAAC	NA	False	NA	3	True	ATTAAA	-13	NA	102992542	103003023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.13	chr11	+	2175	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-2	0	intron_retention	FALSE	canonical	3	19	junction_2	40.6811995889993	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992549	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.14	chr11	+	1635	9	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	44	junction_1	32.3138902022025	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102993896	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.15	chr11	+	1612	9	NIC	ENSMUSG00000056938.17	novel	1959	9	NA	NA	15	-15	intron_retention	FALSE	canonical	3	12	junction_3	47.4919401056642	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGAAAACCTCAGT	NA	False	NA	-12	True	NA	NA	NA	102993916	103003008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.16	chr11	+	1774	9	NIC	ENSMUSG00000056938.17	novel	961	8	NA	NA	31	-15	intron_retention	FALSE	canonical	3	67	junction_1	25.8163586704245	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGAAAACCTCAGT	NA	False	NA	-12	True	NA	NA	NA	102993964	103003008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.2	chr11	+	2349	12	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	6	-3	intron_retention	FALSE	canonical	2	3	junction_10	52.6951312694459	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGTCTGCTGTCTGGG	NA	False	NA	0	True	ATTAAA	-10	NA	102992519	103003020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002107_103002257_103002367
ES.6512.3	chr11	+	2236	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	7	-15	intron_retention	FALSE	canonical	3	42	junction_2	36.0373417443629	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGAAAACCTCAGT	NA	False	NA	-12	True	NA	NA	NA	102992520	103003008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.4	chr11	+	3619	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	7	1414	intron_retention	FALSE	canonical	3	19	junction_2	40.6811995889993	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATATGACTCTGTAGCA	NA	False	NA	NA	False	NA	NA	NA	102992520	103004440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.5	chr11	+	2746	8	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	68	junction_1	27.1074957628072	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992521	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.6	chr11	+	2215	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	10	0	intron_retention	FALSE	canonical	2	3	junction_9	52.0097106317657	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992523	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002107_103002257_103002367
ES.6512.7	chr11	+	2007	12	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	-2	0	intron_retention	FALSE	canonical	1	6	junction_11	48.417263501345	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992532	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367_103002484_103002668
ES.6512.8	chr11	+	1881	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	47.684483849571	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992535	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993864_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6512.9	chr11	+	2483	9	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	68	junction_1	25.5477494116409	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992535	103003025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ES.6513.1	chr11	+	2142	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	3	1350	3	-1350	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTTCAGTGTGATTTC	NA	False	NA	8	True	AATAAA	-19	NA	103007059	103009201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103007100_103009200
ES.6513.2	chr11	+	2685	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	807	3	807	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTTCCTCGTGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	103007863	103010548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103007900_103010500
ES.6514.1	chr11	-	2714	1	Antisense	novelGene_ENSMUSG00000048878.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAGTCCTCTTCGGTCA	8333	False	NA	NA	False	NA	NA	NA	103010380	103007666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_103007700_103010400
ES.6515.1	chr11	+	170	1	Intergenic	novelGene_5233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	103011817	103011987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103011800_103012000
ES.6516.1	chr11	-	2485	1	Antisense	novelGene_ENSMUSG00000043372.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGCCTTTTTTTTCTTT	4668	False	NA	NA	False	ATTAAA	-14	NA	103023686	103021201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_103021200_103023700
ES.6517.1	chr11	+	1284	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	-40	666	-9	19	multi-exon	FALSE	canonical	3	4	junction_1	11.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCACTGGGGCTCTTCTT	NA	False	NA	NA	False	ATTAAA	-37	NA	103024130	103030036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103024284_103024860_103024968_103029012
ES.6517.2	chr11	+	2568	2	FSM	ENSMUSG00000043372.13	ENSMUST00000130341.2	370	2	-542	-1656	9	59	multi-exon	FALSE	canonical	3	27	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAAGCATAAAGTGTGC	NA	False	NA	49	True	AATAAA	-32	NA	103024148	103030761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103024968_103029012
ES.6517.3	chr11	+	1907	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	21	-707	-4	22	multi-exon	FALSE	canonical	3	13	junction_1	7	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGTTAGTGGTGGCA	NA	False	NA	12	True	AATAAA	-19	NA	103024160	103030724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103024249_103024860_103024968_103029012
ES.6517.4	chr11	+	1183	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	37	1	6	-1	multi-exon	FALSE	canonical	3	13	junction_1	7	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGAGTGGCTACAATTG	NA	False	NA	NA	False	ATTAAA	-17	NA	103024176	103030016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103024249_103024860_103024968_103029012
ES.6517.5	chr11	+	1758	1	Genic_Genomic	ENSMUSG00000043372.13	novel	NA	NA	NA	NA	4318	64	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAAAGTGTGCCCTCT	451	False	NA	54	True	AATAAA	-37	NA	103029008	103030766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_103029000_103030800
ES.6518.1	chr11	-	172	1	Intergenic	novelGene_5234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAAAGCCATTTTT	NA	False	NA	NA	False	NA	NA	NA	103041575	103041403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103041400_103041600
ES.6519.1	chr11	+	4217	26	NNC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-391	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	9.20208671986958	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4657	False	NA	21	True	AATAAA	-14	NA	103061541	103089725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076424_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.10	chr11	+	3933	27	NIC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-144	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	9.64395754655543	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4904	False	NA	21	True	AATAAA	-14	NA	103061788	103089725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_103062268_103070341_103070426_103071707_103071792_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.11	chr11	+	3264	21	NNC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.7707938426097	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTCGGCTCGGTGCCT	4911	False	NA	23	True	AATAAA	-16	NA	103061795	103089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062074_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.12	chr11	+	3952	26	NNC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-133	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.20208671986958	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGACGTGCGTCGGCTC	4915	False	NA	16	True	AATAAA	-9	NA	103061799	103089720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073601_103076433_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.13	chr11	+	4186	28	NNC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	9.85073789302289	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTCGGCTCGGTGCCT	4950	False	NA	23	True	AATAAA	-16	NA	103061834	103089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103088795_103089060_103089308
ES.6519.14	chr11	+	3892	27	NNC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.4440606263495	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTCGGCTCGGTGCCT	4989	False	NA	23	True	AATAAA	-16	NA	103061873	103089727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071792_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073899_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.19	chr11	+	3592	27	NNC	ENSMUSG00000055805.16	novel	2830	15	NA	NA	3392	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.02855430838228	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTGCGTCGGCTCGGTG	8646	False	NA	20	True	AATAAA	-13	NA	103065530	103089724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103065637_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.2	chr11	+	6706	24	NNC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-254	1	intron_retention	FALSE	canonical	0	0	junction_6	9.41984391363667	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGACGTGCGTCGGCTCGG	4794	False	NA	18	True	AATAAA	-11	NA	103061678	103089722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103073594_103073841_103073899_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.20	chr11	+	1727	11	ISM	ENSMUSG00000055805.16	ENSMUST00000042286.12	3806	26	22816	8	1611	-2	3prime_fragment	FALSE	canonical	3	27	junction_3	5.10294032886923	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGACGTGCGTCGGCT	NA	False	NA	15	True	AATAAA	-8	NA	103084748	103089719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.3	chr11	+	4073	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	-251	2	-251	-2	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4797	False	NA	21	True	AATAAA	-14	NA	103061681	103089725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.4	chr11	+	3984	26	NNC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-164	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	9.20208671986958	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4884	False	NA	21	True	AATAAA	-14	NA	103061768	103089725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076430_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.6519.6	chr11	+	4080	27	NNC	ENSMUSG00000055805.16	novel	3693	27	NA	NA	-158	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	11.819212621078	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTGCGTCGGCTCGGTGC	4890	False	NA	21	True	AATAAA	-14	NA	103061774	103089725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076424_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103088960_103089060_103089308
ES.6519.9	chr11	+	3946	26	NIC	ENSMUSG00000055805.16	novel	3806	26	NA	NA	-146	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	9.98430768756652	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTGCGTCGGCTCGGTG	4902	False	NA	20	True	AATAAA	-13	NA	103061786	103089724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ES.652.1	chr1	+	176	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTATTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	64970091	64970267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_64970100_64970300
ES.6520.1	chr11	-	354	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9050	2	9024	1	3prime_fragment	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTGCGCCTAGTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	103090324	103089771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103089945_103090143
ES.6521.1	chr11	-	2620	4	NIC	ENSMUSG00000044787.8	novel	1112	5	NA	NA	49	1612	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGAAAGTGGCTTTG	6201	False	NA	NA	False	NA	NA	NA	103109209	103097340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103099070_103099586_103100372_103100633_103100698_103109167
ES.6522.2	chr11	-	4292	15	NIC	ENSMUSG00000020941.8	novel	4246	16	NA	NA	100	-3	intron_retention	FALSE	canonical	1	2	junction_12	1.8405855323893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGGGTGTTTGTAGGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	103158198	103110590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103158163
ES.6522.3	chr11	-	4167	16	FSM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	75	4	75	-4	multi-exon	FALSE	canonical	1	2	junction_13	1.87853370714738	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATGGGTGTTTGTAGGCT	NA	False	NA	NA	False	AATAAA	-11	NA	103158223	103110591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103158163
ES.6522.4	chr11	-	3231	4	NIC	ENSMUSG00000020941.8	novel	4246	16	NA	NA	91	29	intron_retention	FALSE	canonical	1	2	junction_1	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACACCACAGAGCTAA	NA	False	NA	NA	False	NA	NA	NA	103158207	103127826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103130669_103131862_103131933_103132940_103133216_103158163
ES.6523.1	chr11	+	592	1	Genic_Genomic	ENSMUSG00000085360.2	novel	NA	NA	NA	NA	4801	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCTTAAGATTCCATT	NA	False	NA	NA	False	NA	NA	NA	103251327	103251919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_103251300_103251900
ES.6524.10	chr11	-	1768	3	FSM	ENSMUSG00000034255.19	ENSMUST00000092557.6	1504	3	100	-364	43	364	multi-exon	FALSE	canonical	3	7	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCAGTGAGGCGTGGAA	8217	False	NA	NA	False	AATAAA	-16	NA	103254190	103250200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103251745_103253032_103253161_103254094
ES.6524.2	chr11	-	4117	16	NNC	ENSMUSG00000034255.19	novel	4261	18	NA	NA	-17	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.91269819963779	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGTACTCTGGTAGTAG	8157	False	NA	6	True	NA	NA	NA	103254250	103222316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103223867_103223976_103224081_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
ES.6524.3	chr11	-	3395	16	NIC	ENSMUSG00000034255.19	novel	3512	16	NA	NA	25	1	combination_of_known_junctions	TRUE	canonical	1	1	junction_15	5.57215298505783	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCGAATGTACTCTGGT	NA	False	NA	1	True	NA	NA	NA	103247162	103222321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103247090
ES.6524.5	chr11	-	4393	18	FSM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	-133	1	-76	0	multi-exon	FALSE	canonical	2	3	junction_6	4.84999910819383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	8041	False	NA	-1	True	NA	NA	NA	103254366	103222323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
ES.6524.7	chr11	-	5068	15	NIC	ENSMUSG00000034255.19	novel	4261	18	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_11	5.62655874094514	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGCGAATGTACTCTG	8144	False	NA	-1	True	NA	NA	NA	103254263	103222323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230810_103231231_103251072_103251745_103253032_103253161_103254094
ES.6524.9	chr11	-	5261	16	NIC	ENSMUSG00000034255.19	novel	4261	18	NA	NA	16	-1	intron_retention	FALSE	canonical	3	7	junction_13	4.5146674542232	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGCGAATGTACTCT	8133	False	NA	-2	True	NA	NA	NA	103254274	103222324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072_103251745_103253032_103253161_103254094
ES.6525.1	chr11	+	1384	1	Intergenic	novelGene_5235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAGAAAAGAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	103280239	103281623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103280200_103281600
ES.6526.1	chr11	+	221	1	Intergenic	novelGene_5237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTCCCAGGCCTGCA	NA	False	NA	NA	False	NA	NA	NA	103296441	103296662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103296400_103296700
ES.6527.1	chr11	-	4617	5	ISM	ENSMUSG00000034247.10	ENSMUST00000184350.2	2260	8	19349	-2344	19349	2	3prime_fragment	TRUE	canonical	3	69	junction_4	8.77496438739212	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTAGTGTCTATTT	1164	False	NA	0	True	AATAAA	-19	NA	103266245	103255098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765
ES.6527.10	chr11	-	7050	4	ISM	ENSMUSG00000034247.10	ENSMUST00000184350.2	2260	8	18983	-1527	18983	-815	intron_retention	FALSE	canonical	3	79	junction_3	5.24933858267454	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	798	False	NA	-1	True	AGTAAA	-19	NA	103266611	103255915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687
ES.6527.11	chr11	-	4315	5	ISM	ENSMUSG00000034247.10	ENSMUST00000184350.2	2260	8	18834	-1527	18834	-815	3prime_fragment	FALSE	canonical	3	69	junction_4	8.77496438739212	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	649	False	NA	-1	True	AGTAAA	-19	NA	103266760	103255915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765
ES.6527.12	chr11	-	3439	6	NNC	ENSMUSG00000034247.10	novel	2260	8	NA	NA	19485	-815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.7259543971701	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	1300	False	NA	-1	True	AGTAAA	-19	NA	103266109	103255915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103265136
ES.6527.13	chr11	-	5137	12	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	4	-815	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	25.652799373606	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTTTCTGAATCTCA	NA	False	NA	-1	True	AGTAAA	-19	NA	103303509	103255915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261870_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.14	chr11	-	5077	11	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	8799	-816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	26.8223787162884	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTGTTTCTGAATCTC	NA	False	NA	-2	True	AGTAAA	-18	NA	103294714	103255916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278217_103285513_103286141_103287852_103288101_103294650
ES.6527.15	chr11	-	5030	12	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	-3	-817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.6593317960584	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTTGTTTCTGAATCT	NA	False	NA	-3	True	AGTAAA	-17	NA	103303516	103255917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286017_103287852_103288101_103294650_103294737_103303418
ES.6527.17	chr11	-	5736	11	NIC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	18	-818	intron_retention	FALSE	canonical	3	46	junction_5	15.7530949340122	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCTTGTTTCTGAATC	NA	False	NA	-4	True	AGTAAA	-16	NA	103303495	103255918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.18	chr11	-	4671	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-18	1315	-18	1027	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCAGAGGCTGCCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	103303531	103256415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.19	chr11	-	3696	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-16	2288	-16	54	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTTCCCCCTTCATAG	NA	False	NA	NA	False	AGTAAA	-21	NA	103303529	103257388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.2	chr11	-	5977	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-10	1	-10	-1	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTTGTGTTTAGTGTCTA	NA	False	NA	-3	True	AATAAA	-16	NA	103303523	103255101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.20	chr11	-	3620	12	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	-3	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.8709063660952	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGGTTTTTTCCCCCT	NA	False	NA	NA	False	AGTAAA	-15	NA	103303516	103257394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258525_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.21	chr11	-	3927	1	NIC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	18266	-5959	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGAGCCTTTAGTAGTA	81	False	NA	NA	False	AATAAA	-19	NA	103267328	103263401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103263400_103267300
ES.6527.22	chr11	-	3147	7	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-3	11861	-3	-9519	5prime_fragment	FALSE	canonical	3	46	junction_1	16.3647656737136	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGTATTGGACAACA	NA	False	NA	NA	False	NA	NA	NA	103303516	103266961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.23	chr11	-	2320	4	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	7050	-9519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.9977776790036	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGTATTGGACAACA	NA	False	NA	NA	False	NA	NA	NA	103278544	103266961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103268340_103270859_103271179_103277783_103278175_103278312
ES.6527.24	chr11	-	2702	6	ISM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	11	14812	11	-12470	5prime_fragment	FALSE	canonical	3	54	junction_5	14.3861044066836	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTATTAGCTCAAAATG	NA	False	NA	NA	False	ATTAAA	-13	NA	103303502	103269912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.25	chr11	-	5354	1	Intergenic	novelGene_5236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTACAAAACCATTTC	NA	False	NA	NA	False	ATTAAA	-34	NA	103293647	103288293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103288300_103293600
ES.6527.3	chr11	-	5477	3	ISM	ENSMUSG00000034247.10	ENSMUST00000184350.2	2260	8	24057	-2338	24057	-4	3prime_fragment	FALSE	canonical	3	89	junction_1	1	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCGTTGTGTTTAGTGT	5872	False	NA	-6	True	AATAAA	-13	NA	103261537	103255104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_103257820_103258423_103258582_103258933
ES.6527.4	chr11	-	5211	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	-57	814	-57	-814	multi-exon	FALSE	canonical	3	46	junction_6	16.0020659823186	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303570	103255914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.7	chr11	-	5426	12	NNC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	4	-814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.105000945799	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303509	103255914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264489_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6527.9	chr11	-	4772	11	NIC	ENSMUSG00000034247.10	novel	5968	12	NA	NA	-9	-814	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	26.4794259756514	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303522	103255914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ES.6528.1	chr11	-	162	1	Intergenic	novelGene_5238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	103304870	103304708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103304700_103304900
ES.6529.1	chr11	+	3530	1	Genic_Genomic	ENSMUSG00000110636.2	novel	NA	NA	NA	NA	-3223	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTGGAGATTGACTT	9997	False	NA	NA	False	TATAAA	-15	NA	103309338	103312868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_103309300_103312900
ES.653.1	chr1	-	8670	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	-23	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATATCAGCTTTATTTA	NA	False	NA	0	True	AATAAA	-20	NA	64996006	64828274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
ES.653.10	chr1	-	3780	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	85	4697	-12	-9	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAACCTAAACTATTAAG	NA	False	NA	NA	False	ATTAAA	-29	NA	64995898	64832976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ES.653.11	chr1	-	3658	7	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	9	-32	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.3346773319517	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAGTAACATTTTGAA	NA	False	NA	NA	False	ATTAAA	-6	NA	64995877	64832999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
ES.653.12	chr1	-	4427	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTATTTTCTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	64853337	64848910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64848900_64853300
ES.653.13	chr1	-	4117	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAAAGCAGACTGGG	NA	False	NA	NA	False	NA	NA	NA	64907698	64903581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64903600_64907700
ES.653.14	chr1	-	1112	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAACACCCACATCTGT	3103	False	NA	NA	False	NA	NA	NA	64953726	64952614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_64952600_64953700
ES.653.2	chr1	-	8509	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	53	0	4	0	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCTCATATCAGCTTT	NA	False	NA	-5	True	AATAAA	-15	NA	64995930	64828279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ES.653.3	chr1	-	5094	7	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	-46	2082	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	10.6679686705368	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTGTGATTACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64967302	64830885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64967191
ES.653.4	chr1	-	5886	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	70	2606	21	2082	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTGTGATTACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64995913	64830885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ES.653.5	chr1	-	5944	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	-5	2082	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTGTGATTACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64995891	64830885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
ES.653.7	chr1	-	4028	7	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	5	1141	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.5672449894316	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTTTAGCACACCTG	NA	False	NA	NA	False	AATAAA	-20	NA	64995929	64831826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64976855_64977699_64995853
ES.653.8	chr1	-	4690	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	53	3819	4	869	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAATTCTAGACCTGCT	NA	False	NA	NA	False	NA	NA	NA	64995930	64832098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ES.653.9	chr1	-	3866	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	24	33	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAATTAATATTATCG	NA	False	NA	NA	False	NA	NA	NA	64995862	64832934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
ES.6530.1	chr11	+	3060	1	Intergenic	novelGene_5239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103455648	103458708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103455600_103458700
ES.6530.2	chr11	+	242	1	Intergenic	novelGene_5240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGACACAGACTGCCCAA	NA	False	NA	NA	False	NA	NA	NA	103457375	103457617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103457400_103457600
ES.6530.3	chr11	+	347	1	Intergenic	novelGene_5241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTAACGGACAAGC	NA	False	NA	NA	False	NA	NA	NA	103457376	103457723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103457400_103457700
ES.6531.1	chr11	-	3190	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	74	2	74	-2	multi-exon	TRUE	canonical	3	264	junction_1	54.6867442804927	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTTGGCATTCTTTGT	NA	False	NA	0	True	AATAAA	-29	NA	103588650	103567676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.10	chr11	-	1734	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	189	1343	-11	534	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACTAGAACGATCTAGT	NA	False	NA	NA	False	NA	NA	NA	103588535	103569017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.11	chr11	-	690	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-17	371	-13	-164	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGCTTTGTTTTCTGT	NA	False	NA	-5	True	NA	NA	NA	103588537	103569922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.12	chr11	-	1044	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	-26	2248	-26	-164	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGCTTTGTTTTCTGT	NA	False	NA	-5	True	NA	NA	NA	103588750	103569922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.13	chr11	-	747	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	-11	181	-11	-181	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTGGCTTAGTATCAAA	NA	False	NA	-22	True	NA	NA	NA	103588535	103569939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
ES.6531.3	chr11	-	3117	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-201	-1872	3	-5	multi-exon	FALSE	canonical	3	79	junction_1	134.545531326759	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCACTTGGCATTCTT	NA	False	NA	-3	True	AATAAA	-26	NA	103588721	103567679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.4	chr11	-	3882	5	NIC	ENSMUSG00000020946.14	novel	3266	6	NA	NA	-12	-6	intron_retention	FALSE	canonical	3	264	junction_1	52.3855896215744	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGCACTTGGCATTCT	NA	False	NA	-4	True	AATAAA	-25	NA	103588536	103567680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103570224_103574617_103574759_103577407_103578460_103580080_103580146_103588455
ES.6531.6	chr11	-	3006	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	-12	-2077	-12	-7	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGCACTTGGCATTC	NA	False	NA	-5	True	AATAAA	-24	NA	103588536	103567681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
ES.6531.7	chr11	-	3083	6	NNC	ENSMUSG00000020946.14	novel	3266	6	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	140.634846321955	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAGCACTTGGCATTC	NA	False	NA	-5	True	AATAAA	-24	NA	103588519	103567681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103570224_103574617_103574759_103577407_103577570_103578350_103578460_103580080_103580146_103588455
ES.6531.8	chr11	-	2397	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	204	665	0	-665	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGGAGCAGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	103588520	103568339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6531.9	chr11	-	2067	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	197	1002	-3	875	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCAATGTCTGTTGC	NA	False	NA	NA	False	TTTAAA	-33	NA	103588527	103568676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ES.6532.1	chr11	+	240	1	Intergenic	novelGene_5242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGATTACAGTCAGTTAA	9160	False	NA	NA	False	NA	NA	NA	103648141	103648381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103648100_103648400
ES.6533.1	chr11	+	3184	5	FSM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	-46	-62	-46	62	multi-exon	FALSE	canonical	0	0	junction_1	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGGACACATTGTACG	NA	False	NA	NA	False	ATTAAA	-14	NA	103664929	103708845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103665175_103698975_103699218_103702153_103702420_103703106_103703595_103706902
ES.6533.2	chr11	+	2483	3	ISM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	35738	1592	35738	-1592	3prime_fragment	FALSE	canonical	2	2	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTAAAGAAAATAAAAATGA	2968	False	NA	NA	False	NA	NA	NA	103700713	103707191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_103702420_103703106_103703595_103706902
ES.6533.3	chr11	+	3668	3	ISM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	36154	-9	36154	9	3prime_fragment	FALSE	canonical	2	2	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTCATCATGCAGTTT	3384	False	NA	NA	False	NA	NA	NA	103701129	103708792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_103702420_103703106_103703595_103706902
ES.6533.4	chr11	+	792	2	ISM	ENSMUSG00000000125.6	ENSMUST00000000127.6	3076	5	38119	1589	38119	-1589	3prime_fragment	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAATAAAAATGAAAA	5349	False	NA	NA	False	NA	NA	NA	103703094	103707194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_103703595_103706902
ES.6534.1	chr11	+	4935	1	Antisense	novelGene_ENSMUSG00000034187.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACATTTCCACATTATA	NA	False	NA	NA	False	ATTAAA	-38	NA	103713868	103718803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_103713900_103718800
ES.6535.1	chr11	+	176	1	Intergenic	novelGene_5247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103840658	103840834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103840700_103840800
ES.6536.1	chr11	+	1431	1	Intergenic	novelGene_5248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	103841116	103842547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103841100_103842500
ES.6537.1	chr11	-	3814	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	-48	0	-48	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844930	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.11	chr11	-	3808	21	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	70.5156720169354	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTATAGACCAGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	103844800	103712608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844670
ES.6537.12	chr11	-	3718	21	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	70.9301769347857	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGTATAGACCAGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	103844844	103712608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844804
ES.6537.13	chr11	-	3736	21	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	71.0783194792899	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGTATAGACCAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	103844848	103712609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804741_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.15	chr11	-	3668	21	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	70.3234491474928	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103844829	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714044_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.16	chr11	-	3606	19	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	71.7796697377072	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103844848	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807512_103821551_103821642_103844795
ES.6537.17	chr11	-	3815	21	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	-87	-3	combination_of_known_junctions	FALSE	canonical	1	4	junction_20	70.1014265190089	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103829129	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103828990
ES.6537.19	chr11	-	5729	8	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	8867	-3	intron_retention	FALSE	canonical	3	291	junction_7	13.5796967295042	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103754159	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064
ES.6537.20	chr11	-	2996	14	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	83.9050604647755	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103844848	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103844795
ES.6537.21	chr11	-	3599	19	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	-15	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.3837439097058	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103844865	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.23	chr11	-	3544	18	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	73.5079498089908	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGTATAGACCAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	103844889	103712610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103844795
ES.6537.26	chr11	-	6591	20	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	-5	intron_retention	FALSE	canonical	3	278	junction_13	22.4621565405972	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTGTATAGACCAG	NA	False	NA	NA	False	AATAAA	-14	NA	103844848	103712612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.27	chr11	-	10008	19	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	1	-5	intron_retention	FALSE	canonical	3	278	junction_12	23.0085866955881	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTGTATAGACCAG	NA	False	NA	NA	False	AATAAA	-14	NA	103844849	103712612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.28	chr11	-	3907	22	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	93.1465818711868	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATATTGTATAGACCAG	NA	False	NA	NA	False	AATAAA	-14	NA	103844828	103712612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103748551_103748752_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.3	chr11	-	3214	17	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	78.6105660439486	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844837	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.30	chr11	-	3875	22	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	91.2373247805227	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATATTGTATAGACC	NA	False	NA	NA	False	AATAAA	-12	NA	103844825	103712614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844670
ES.6537.31	chr11	-	3190	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	-32	608	-32	535	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCCCTAGTCCTCTCCCT	NA	False	NA	NA	False	AATAAA	-25	NA	103844914	103713215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.32	chr11	-	2973	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	11	782	11	361	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCGTCCGGCTCTAAG	NA	False	NA	-19	True	ATTAAA	-25	NA	103844871	103713389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.34	chr11	-	2988	22	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	351	combination_of_known_junctions	FALSE	canonical	3	14	junction_21	89.2116899491472	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTCTAATTAGCGTC	NA	False	NA	-29	True	ATTAAA	-15	NA	103844848	103713399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
ES.6537.35	chr11	-	3689	1	Intergenic	novelGene_5243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103728831	103725142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103725100_103728800
ES.6537.36	chr11	-	3724	16	NNC	ENSMUSG00000034187.19	novel	3212	9	NA	NA	-6	5595	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	79.1247678599368	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATAGTGTTGCTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	103844888	103746869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103748752_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.37	chr11	-	3225	16	NNC	ENSMUSG00000034187.19	novel	3212	9	NA	NA	2	5136	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	79.1247678599368	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTAAGCCTTTGGTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	103844848	103747328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103748752_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.38	chr11	-	2385	16	NNC	ENSMUSG00000034187.19	novel	3212	9	NA	NA	6	4300	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	79.1247678599368	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTAGACTTTTAGTTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	103844844	103748164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103748752_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.39	chr11	-	4603	9	FSM	ENSMUSG00000092540.2_ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	-18	-1373	14	770	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTCTAGATAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	103844868	103769970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.40	chr11	-	4610	10	Fusion	ENSMUSG00000092540.2_ENSMUSG00000034187.19	novel	3212	9	NA	NA	-9	738	multi-exon	FALSE	canonical	3	14	junction_9	126.092656505807	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103844859	103770002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
ES.6537.41	chr11	-	5485	1	FSM	ENSMUSG00000092540.2	ENSMUST00000172606.2	329	1	-4963	-193	-4963	193	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGGAAACCTAATGG	NA	False	NA	NA	False	NA	NA	NA	103776032	103770547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103770500_103776000
ES.6537.42	chr11	-	4046	9	FSM	ENSMUSG00000092540.2_ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	-40	-794	-8	191	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGAAACCTAAT	NA	False	NA	NA	False	NA	NA	NA	103844890	103770549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.43	chr11	-	1191	9	FSM	ENSMUSG00000034187.19	ENSMUST00000145126.8	3212	9	-38	2059	-6	-2059	multi-exon	FALSE	canonical	3	278	junction_2	26.9973957077345	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTAGCTCTCAACCTT	NA	False	NA	NA	False	AATAAA	-26	NA	103844888	103773402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.44	chr11	-	189	1	Intergenic	novelGene_5244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTAGCTCATTTCCTT	NA	False	NA	NA	False	NA	NA	NA	103823265	103823076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103823100_103823300
ES.6537.45	chr11	-	1173	1	Intergenic	novelGene_5245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	103839914	103838741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103838700_103839900
ES.6537.46	chr11	-	3824	1	Intergenic	novelGene_5246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAATTGAGTCTTTTTT	NA	False	NA	NA	False	AATATA	-20	NA	103843040	103839216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103839200_103843000
ES.6537.5	chr11	-	5269	20	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	5	0	intron_retention	FALSE	canonical	3	278	junction_13	22.3131825686855	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844845	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.6	chr11	-	3862	21	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.9143673736148	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844851	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714748_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.7	chr11	-	3781	22	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_21	89.2116899491472	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844849	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
ES.6537.8	chr11	-	4211	20	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	278	junction_13	21.767214666765	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844848	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ES.6537.9	chr11	-	3715	18	NNC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	9083	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	73.5079498089908	410	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	2183	False	NA	NA	False	AATAAA	-19	NA	103807894	103712607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103807632
ES.6538.1	chr11	+	207	1	Intergenic	novelGene_5249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTCAACCAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	103846370	103846577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_103846400_103846600
ES.6539.1	chr11	-	218	1	Intergenic	novelGene_5250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATTAGTGGTTGATGG	NA	False	NA	NA	False	NA	NA	NA	103853551	103853333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103853300_103853600
ES.654.1	chr1	-	764	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	-31	-79	-31	79	mono-exon	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCTTTTACAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	65033794	65033030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_65033000_65033800
ES.654.2	chr1	-	586	2	Genic_Genomic	ENSMUSG00000084416.4	novel	654	1	NA	NA	-27	61	multi-exon	FALSE	non_canonical	0	0	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATC	NA	False	NA	NA	False	NA	NA	NA	65033790	65033048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_65033603_65033758
ES.6540.1	chr11	-	267	1	Intergenic	novelGene_5251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATATTATATATTCTT	NA	False	NA	NA	False	AATGAA	-12	NA	103855849	103855582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103855600_103855800
ES.6541.1	chr11	-	177	1	Intergenic	novelGene_5252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGGTTACCAA	NA	False	NA	NA	False	NA	NA	NA	103856873	103856696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103856700_103856900
ES.6542.1	chr11	+	2259	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	-18	1	-18	-1	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTCATGTTCTCCTGG	NA	False	NA	30	True	AATAAA	-19	NA	103857546	103876162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ES.6542.2	chr11	+	3092	1	NIC	ENSMUSG00000062421.14	novel	2242	5	NA	NA	2650	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGACATGGTCATGTTC	NA	False	NA	24	True	AATAAA	-13	NA	103873064	103876156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_103873100_103876200
ES.6543.1	chr11	-	178	1	Intergenic	novelGene_5253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGAGT	NA	False	NA	NA	False	NA	NA	NA	103867229	103867051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103867100_103867200
ES.6544.1	chr11	-	156	1	Intergenic	novelGene_5254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	103878129	103877973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103878000_103878100
ES.6545.1	chr11	-	165	1	Intergenic	novelGene_5255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATCAGGCAGAAGT	NA	False	NA	NA	False	NA	NA	NA	103882237	103882072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_103882100_103882200
ES.6546.1	chr11	+	3344	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-143	1696	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	219.953652788491	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104122072	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.10	chr11	+	3104	10	NIC	ENSMUSG00000018411.18	novel	1527	11	NA	NA	14	1684	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	226.651470078817	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104122354	104220945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104198706_104198761_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.11	chr11	+	202	1	Intergenic	novelGene_5256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTTTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	104174163	104174365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104174200_104174400
ES.6546.12	chr11	+	1524	1	NIC	ENSMUSG00000018411.18	novel	418	5	NA	NA	4508	-6512	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAATAATAAAAATAAGAA	NA	False	NA	NA	False	NA	NA	NA	104177714	104179238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104177700_104179200
ES.6546.13	chr11	+	2201	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4853	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.525893339555	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178059	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104189212_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.14	chr11	+	5225	10	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	4906	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	203.4080615565	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTCATGAGTTCCAA	NA	False	NA	NA	False	AATAAA	-25	NA	104178112	104222922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196037_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.15	chr11	+	1277	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4907	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.853421642833	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178113	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.16	chr11	+	1304	8	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	4907	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.699558158489	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178113	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.17	chr11	+	4867	7	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4907	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.844793664459	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTCATGAGTTCCAA	NA	False	NA	NA	False	AATAAA	-25	NA	104178113	104222922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.18	chr11	+	1625	10	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4907	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	233.975993281573	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178113	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196037_104196236_104197451_104197585_104198610_104198761_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.19	chr11	+	1303	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4907	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.582956872359	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAACATGTAAAA	NA	False	NA	8	True	AATAAA	-12	NA	104178113	104219264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196207_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.2	chr11	+	1508	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	28	31	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	219.953652788491	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCCTTGGGCAAT	NA	False	NA	36	True	AATAAA	-40	NA	104122243	104219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.20	chr11	+	2889	7	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4920	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.844793664459	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104178126	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.21	chr11	+	5407	6	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4926	5	intron_retention	FALSE	canonical	0	0	junction_1	225.934857868369	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178132	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104193186_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.22	chr11	+	3033	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4939	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	228.007092817307	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104178145	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.23	chr11	+	2926	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4949	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.853421642833	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104178155	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.24	chr11	+	1328	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4950	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.677699809328	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178156	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213256_104213367_104218797
ES.6546.25	chr11	+	3636	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4950	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.17517106543	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104178156	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104189371_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.26	chr11	+	3006	9	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	4950	1684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	204.087450618601	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104178156	104220945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.27	chr11	+	3671	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4950	1683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.059095668917	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAAAAGGACGCA	NA	False	NA	NA	False	NA	NA	NA	104178156	104220944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104189323_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.28	chr11	+	2950	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4956	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	235.417995601571	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104178162	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.29	chr11	+	1932	9	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	4963	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	230.17517106543	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104178169	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104185684_104185751_104189371_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.3	chr11	+	3237	10	FSM	ENSMUSG00000018411.18	ENSMUST00000106992.10	5253	10	57	1959	-32	1696	multi-exon	FALSE	canonical	3	21	junction_2	196.187551989303	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104122272	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.30	chr11	+	4046	7	NNC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	4965	1787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9837908225998	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAATGGATCTTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	104178171	104199371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104178212_104178579_104180821_104185684_104185751_104189323_104190083_104193186_104193237_104197451_104197585_104198614
ES.6546.31	chr11	+	3393	10	NNC	ENSMUSG00000018411.18	novel	1362	12	NA	NA	7203	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	200.759114916913	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104180409	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104180821_104181727_104181765_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.32	chr11	+	3344	9	ISM	ENSMUSG00000018411.18	ENSMUST00000100347.11	1362	12	58012	-1894	7215	1678	3prime_fragment	FALSE	canonical	3	18	junction_1	202.144750117335	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104180421	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_104180821_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.33	chr11	+	3221	8	NIC	ENSMUSG00000018411.18	novel	1362	12	NA	NA	7245	1678	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	222.022337541399	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104180451	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104180821_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.34	chr11	+	1552	11	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	7290	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.095920406315	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104180496	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104180593_104180733_104180821_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.35	chr11	+	1530	9	NNC	ENSMUSG00000018411.18	novel	1362	12	NA	NA	7326	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	226.327990701548	336	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCCTTGGGCAAT	NA	False	NA	36	True	AATAAA	-40	NA	104180532	104219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104180821_104181727_104181765_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.36	chr11	+	1501	10	NIC	ENSMUSG00000018411.18	novel	2202	13	NA	NA	7482	5	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	200.209396555546	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104180688	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104180821_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.37	chr11	+	3192	10	NIC	ENSMUSG00000018411.18	novel	2202	13	NA	NA	7482	1696	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	200.209396555546	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	104180688	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104180821_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.38	chr11	+	1592	10	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	7630	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.727600222077	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAACATATTTAAG	NA	False	NA	-12	True	NA	NA	NA	104180836	104219244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104181082_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.39	chr11	+	3086	8	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	7640	1677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	224.853421642833	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	104180846	104220938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104181082_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.4	chr11	+	1478	9	NNC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-29	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	211.176725457613	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104122275	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104208981_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.40	chr11	+	1429	10	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	10263	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.288985618144	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104183469	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104183569_104185684_104185751_104193186_104193237_104196138_104196236_104197451_104197585_104198706_104198761_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.41	chr11	+	3019	7	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	12302	1669	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	215.566695015719	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	104185508	104220930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.42	chr11	+	3764	8	NNC	ENSMUSG00000018411.18	novel	2250	13	NA	NA	12321	1677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	209.77159590607	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	104185527	104220938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104185751_104189323_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213256_104213367_104218797
ES.6546.43	chr11	+	1360	9	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	13486	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.81375073747	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCCTTGGGCAAT	341	False	NA	36	True	AATAAA	-40	NA	104186692	104219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104186724_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.44	chr11	+	3822	7	NIC	ENSMUSG00000018411.18	novel	2250	13	NA	NA	15858	1696	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	223.553125677097	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	2713	False	NA	NA	False	NA	NA	NA	104189064	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.45	chr11	+	2365	6	NNC	ENSMUSG00000018411.18	novel	2250	13	NA	NA	16038	7674	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	39.0742882212843	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	2893	False	NA	NA	False	NA	NA	NA	104189244	104205258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104190083_104193186_104193237_104196138_104196236_104197451_104197585_104201094_104201361_104204277
ES.6546.46	chr11	+	2052	1	NIC	ENSMUSG00000018411.18	novel	2202	13	NA	NA	16052	5167	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACTACGTGACATTTT	2907	False	NA	NA	False	AATAAA	-17	NA	104189258	104191310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104189300_104191300
ES.6546.47	chr11	+	1930	4	NNC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-12039	7674	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	52.3513769319076	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	5817	False	NA	NA	False	NA	NA	NA	104196819	104205258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104197370_104197451_104197585_104201094_104201361_104204277
ES.6546.48	chr11	+	3268	6	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-12015	1684	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	225.353411334286	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	5841	False	NA	NA	False	NA	NA	NA	104196843	104220945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104197370_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.49	chr11	+	3329	7	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-11975	1692	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	221.979478530987	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGACGCATGTATCTTG	5881	False	NA	NA	False	NA	NA	NA	104196883	104220953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104197370_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.5	chr11	+	3297	10	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-5	1678	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	222.69000764779	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104122299	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104196037_104196236_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.50	chr11	+	1352	6	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-11752	31	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	225.353411334286	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCCTTGGGCAAT	6104	False	NA	36	True	AATAAA	-40	NA	104197106	104219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104197370_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.51	chr11	+	3678	4	NIC	ENSMUSG00000018411.18	novel	1527	11	NA	NA	-10480	37	intron_retention	FALSE	canonical	3	463	junction_1	33.0386978489703	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGGGCAATTGCTAA	7376	False	NA	42	True	AAAACA	-43	NA	104198378	104219298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.52	chr11	+	1084	5	NIC	ENSMUSG00000018411.18	novel	1527	11	NA	NA	-10255	2	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	218.674987138447	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGAAAAAAAAACATGTAAA	7601	False	NA	7	True	AATAAA	-11	NA	104198603	104219263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104198761_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.53	chr11	+	2801	6	ISM	ENSMUSG00000018411.18	ENSMUST00000106993.10	1527	11	76270	-1633	-10248	1633	3prime_fragment	FALSE	canonical	2	9	junction_1	235.960674689661	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGAAAAGAAAGAAAA	7608	False	NA	NA	False	NA	NA	NA	104198610	104220894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_104198761_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.54	chr11	+	2745	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8378	1696	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	9478	False	NA	NA	False	NA	NA	NA	104200480	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.55	chr11	+	2690	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8377	1696	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	9479	False	NA	NA	False	NA	NA	NA	104200481	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.56	chr11	+	2618	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8374	1671	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	220.821619186166	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGGAAAAA	9482	False	NA	NA	False	NA	NA	NA	104200484	104220932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200507_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.57	chr11	+	1044	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8373	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	236.969702704797	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	9483	False	NA	10	True	AATAAA	-14	NA	104200485	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200507_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.58	chr11	+	946	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8368	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	220.821619186166	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	9488	False	NA	10	True	AATAAA	-14	NA	104200490	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200507_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.59	chr11	+	1070	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8368	31	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTCCTTGGGCAAT	9488	False	NA	36	True	AATAAA	-40	NA	104200490	104219292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.6	chr11	+	3840	10	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-1	1664	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	222.458374522205	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	104122303	104220925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104189323_104190083_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.60	chr11	+	2828	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8368	1696	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	204.272954646473	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	9488	False	NA	NA	False	NA	NA	NA	104200490	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.61	chr11	+	990	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8367	6	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACATGTAAAAACA	9489	False	NA	11	True	AATAAA	-15	NA	104200491	104219267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.62	chr11	+	2737	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8364	1663	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	228.359015587298	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	9492	False	NA	NA	False	NA	NA	NA	104200494	104220924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200551_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.63	chr11	+	3663	4	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8362	1635	intron_retention	FALSE	canonical	3	288	junction_1	102.35993139679	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAGAAAAAG	9494	False	NA	NA	False	NA	NA	NA	104200496	104220896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104213367_104218797
ES.6546.64	chr11	+	2660	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8362	1667	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	219.962923012039	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAAAGGA	9494	False	NA	NA	False	NA	NA	NA	104200496	104220928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200565_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.65	chr11	+	839	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8362	0	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	9494	False	NA	NA	False	NA	NA	NA	104200496	104219067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.66	chr11	+	4640	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8362	6	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTCATGAGTTCCAA	9494	False	NA	NA	False	AATAAA	-25	NA	104200496	104222922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.67	chr11	+	1118	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8349	5	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	204.272954646473	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	9507	False	NA	10	True	AATAAA	-14	NA	104200509	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.68	chr11	+	1540	3	NNC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-8334	7887	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	141	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTGTAACTTTGCTA	9522	False	NA	NA	False	NA	NA	NA	104200524	104205471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104204277
ES.6546.69	chr11	+	2882	3	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8331	-4298	intron_retention	FALSE	canonical	3	288	junction_1	87.5	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAACCCTGTCTCA	9525	False	NA	NA	False	NA	NA	NA	104200527	104214715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176
ES.6546.7	chr11	+	1348	8	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	2	5	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	225.97661067338	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	NA	False	NA	10	True	AATAAA	-14	NA	104122311	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.70	chr11	+	2749	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8330	1638	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	202.06001583688	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAGAAAAAGAAA	9526	False	NA	NA	False	NA	NA	NA	104200528	104220899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213143_104213367_104218797
ES.6546.71	chr11	+	4640	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8320	-6	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAAAAATCTCTGTT	9536	False	NA	NA	False	AATAAA	-13	NA	104200538	104222910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.72	chr11	+	1217	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8205	5	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	222.439744650096	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	9651	False	NA	10	True	AATAAA	-14	NA	104200653	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200848_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.73	chr11	+	4765	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8202	-6	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	368	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAAAAATCTCTGTT	9654	False	NA	NA	False	AATAAA	-13	NA	104200656	104222910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.74	chr11	+	2810	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8200	1696	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGCATGTATCTTGAAAT	9656	False	NA	NA	False	NA	NA	NA	104200658	104220957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.75	chr11	+	2851	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8172	1672	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	222.439744650096	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGGAAAAAA	9684	False	NA	NA	False	NA	NA	NA	104200686	104220933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200848_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.76	chr11	+	1077	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8158	5	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	332	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACATGTAAAAAC	9698	False	NA	10	True	AATAAA	-14	NA	104200700	104219266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6546.77	chr11	+	4664	5	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-7757	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	262.050567639149	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACAAAAATCTCTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	104201101	104222910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104201361_104211888_104211986_104212176_104212259_104213253_104213367_104218797
ES.6546.78	chr11	+	3521	1	Intergenic	novelGene_5257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTAATGTAAATATCCATT	NA	False	NA	NA	False	NA	NA	NA	104202083	104205604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104202100_104205600
ES.6546.79	chr11	+	8064	3	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-1567	1678	intron_retention	FALSE	non_canonical	0	0	junction_1	265.5	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104207291	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104211001_104211153_104213367_104218797
ES.6546.8	chr11	+	3129	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	3	1694	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	204.655045136933	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACGCATGTATCTTGAA	NA	False	NA	NA	False	NA	NA	NA	104122312	104220955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.80	chr11	+	4661	4	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-821	14	intron_retention	FALSE	non_canonical	0	0	junction_1	251.263916143078	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGTAAAAACATGGCCAAA	NA	False	NA	19	True	AATAAA	-23	NA	104208037	104219275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104211001_104211151_104212259_104213253_104213367_104218797
ES.6546.81	chr11	+	908	4	ISM	ENSMUSG00000018411.18	ENSMUST00000106988.8	2202	13	35623	-251	-29	3	3prime_fragment	FALSE	canonical	3	74	junction_1	216.380837105938	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAAACATGTAAAA	NA	False	NA	8	True	AATAAA	-12	NA	104208829	104219264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_104209076_104212176_104212259_104213253_104213367_104218797
ES.6546.82	chr11	+	2408	3	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-26	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	265.5	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGGAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	104212748	104220939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104212902_104213253_104213367_104218797
ES.6546.83	chr11	+	4735	2	FSM	ENSMUSG00000018411.18	ENSMUST00000126820.2	831	2	-18	-3886	-18	6	multi-exon	FALSE	canonical	3	531	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTTCATGAGTTCCAA	NA	False	NA	NA	False	AATAAA	-25	NA	104212756	104222922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_104213367_104218797
ES.6546.84	chr11	+	222	1	Intergenic	novelGene_5260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGGGTGCCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	104214120	104214342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104214100_104214300
ES.6546.85	chr11	+	2099	1	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	6021	1633	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	104218795	104220894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104218800_104220900
ES.6546.9	chr11	+	2989	8	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	-11	1664	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	225.97661067338	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	104122329	104220925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ES.6547.1	chr11	-	524	5	NNC	ENSMUSG00000085134.2	novel	466	5	NA	NA	-167	28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104150354	104141699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104141783_104142324_104142446_104144108_104144251_104144351_104144410_104150234
ES.6548.1	chr11	-	3025	1	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	104180073	104177048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_104177000_104180100
ES.6548.2	chr11	-	1909	2	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	104180071	104177048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_104178875_104179988
ES.6549.1	chr11	-	3605	1	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104190895	104187290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_104187300_104190900
ES.655.1	chr1	+	989	1	FSM	ENSMUSG00000090042.2	ENSMUST00000161621.2	653	1	-94	-242	-94	242	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAATTTATTT	5138	False	NA	NA	False	GATAAA	-17	NA	65067144	65068133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65067100_65068100
ES.6550.1	chr11	-	236	1	Intergenic	novelGene_5258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGTGGAGATCGACC	NA	False	NA	NA	False	NA	NA	NA	104203725	104203489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104203500_104203700
ES.6551.1	chr11	-	133	1	Intergenic	novelGene_5259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	104207222	104207089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104207100_104207200
ES.6552.1	chr11	-	176	1	Intergenic	novelGene_5261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATTAAAGG	NA	False	NA	NA	False	NA	NA	NA	104215307	104215131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104215100_104215300
ES.6553.1	chr11	+	176	1	Intergenic	novelGene_5266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCAACCCT	5459	False	NA	NA	False	NA	NA	NA	104301924	104302100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104301900_104302100
ES.6554.1	chr11	+	1271	1	Antisense	novelGene_ENSMUSG00000018412.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATGAACAACAAAAGCA	2787	False	NA	NA	False	ATTAAA	-24	NA	104332750	104334021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_104332800_104334000
ES.6555.1	chr11	-	5229	17	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-88	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	71.3474936052417	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGATGCATTGACTCTT	9750	False	NA	NA	False	NA	NA	NA	104360269	104224142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.10	chr11	-	5010	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-592	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_15	56.9102997903035	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9740	False	NA	-2	True	NA	NA	NA	104360279	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.100	chr11	-	4226	1	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-3266	-5419	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACATACAGTAACACTT	NA	False	NA	NA	False	NA	NA	NA	104235391	104231165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104231200_104235400
ES.6555.101	chr11	-	5217	9	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-117	-5419	combination_of_known_splicesites	FALSE	canonical	3	61	junction_6	61.9147599526963	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACATACAGTAACACTT	8052	False	NA	NA	False	NA	NA	NA	104333234	104231165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.102	chr11	-	5898	7	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-8	-5419	intron_retention	FALSE	canonical	3	61	junction_4	68.2267461402703	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACATACAGTAACACTT	8161	False	NA	NA	False	NA	NA	NA	104333125	104231165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.103	chr11	-	5238	11	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-88	-5419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.3968170710009	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACATACAGTAACACTT	8081	False	NA	NA	False	NA	NA	NA	104333205	104231165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104326646_104326742_104332550
ES.6555.104	chr11	-	3400	6	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-577	-20321	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	67.6550072056755	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	9755	False	NA	NA	False	NA	NA	NA	104360264	104246067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.105	chr11	-	2789	1	Intergenic	novelGene_5262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCTCACAAGGCCAT	NA	False	NA	NA	False	NA	NA	NA	104257073	104254284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104254300_104257100
ES.6555.106	chr11	-	2967	1	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-29580	-32992	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGGGGAAGTTGTGCA	NA	False	NA	NA	False	NA	NA	NA	104261705	104258738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104258700_104261700
ES.6555.107	chr11	-	3360	1	Intergenic	novelGene_5263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	104280063	104276703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104276700_104280100
ES.6555.108	chr11	-	173	1	Intergenic	novelGene_5264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	455	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAAGGCATGGC	NA	False	NA	NA	False	NA	NA	NA	104279764	104279591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104279600_104279800
ES.6555.109	chr11	-	172	1	Intergenic	novelGene_5265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAT	4849	False	NA	NA	False	NA	NA	NA	104297552	104297380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104297400_104297600
ES.6555.11	chr11	-	3233	12	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-37503	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	79.1038651875071	505	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	104269628	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226394_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510
ES.6555.110	chr11	-	4699	1	Intergenic	novelGene_5267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCTTTGGGTGCTAG	NA	False	NA	NA	False	NA	NA	NA	104309619	104304920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104304900_104309600
ES.6555.111	chr11	-	4244	1	Intergenic	novelGene_5268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATAATAAAACCGTTT	NA	False	NA	NA	False	AAAACA	-37	NA	104314418	104310174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104310200_104314400
ES.6555.112	chr11	-	4151	3	NIC	ENSMUSG00000018412.17	novel	755	3	NA	NA	-125	3057	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	9	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAGTAAAGCACTTAAA	8044	False	NA	NA	False	AATAAA	-20	NA	104333242	104312705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104316120_104317249_104317295_104332550
ES.6555.113	chr11	-	4964	1	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-71	-11873	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	8687	False	NA	NA	False	AAAAAG	-43	NA	104332599	104327635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104327600_104332600
ES.6555.114	chr11	-	5074	1	Genic_Genomic	ENSMUSG00000018412.17	novel	NA	NA	NA	NA	-4171	-16452	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAAAACAAACTCTTGC	3998	False	NA	NA	False	NA	NA	NA	104337288	104332214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_104332200_104337300
ES.6555.12	chr11	-	5008	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-581	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	71.3494608398002	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7588	False	NA	-2	True	NA	NA	NA	104333698	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104333451
ES.6555.13	chr11	-	4861	16	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-587	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	75.5451299996675	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9745	False	NA	-2	True	NA	NA	NA	104360274	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.14	chr11	-	5003	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-666	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	66.4934930304057	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7503	False	NA	-2	True	NA	NA	NA	104333783	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104333451
ES.6555.15	chr11	-	5282	13	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-143	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8026	False	NA	-2	True	NA	NA	NA	104333260	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.16	chr11	-	4821	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-592	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_14	61.3522782039618	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9740	False	NA	-2	True	NA	NA	NA	104360279	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.17	chr11	-	5428	15	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-145	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	72.5383783009423	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8024	False	NA	-2	True	NA	NA	NA	104333262	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.18	chr11	-	4932	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-649	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	83.0648851677349	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7520	False	NA	-2	True	NA	NA	NA	104333766	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104333451
ES.6555.19	chr11	-	5539	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-122	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	66.5093594763864	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8047	False	NA	-3	True	NA	NA	NA	104333239	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241470_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.2	chr11	-	5027	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-108	-92	combination_of_known_splicesites	FALSE	canonical	3	61	junction_11	60.3367277042696	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTTGATGCATTGAC	8650	False	NA	NA	False	NA	NA	NA	104332636	104224146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.21	chr11	-	4790	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-55	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	74.1750687792224	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8703	False	NA	-3	True	NA	NA	NA	104332583	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229071_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.22	chr11	-	4426	11	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	236	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	77.0730173277263	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8665	False	NA	-3	True	NA	NA	NA	104358581	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104314747_104316120_104358464
ES.6555.23	chr11	-	5594	16	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-123	-1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	68.0631732698054	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	8046	False	NA	-3	True	NA	NA	NA	104333240	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.24	chr11	-	4983	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-575	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	71.6893297499705	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	9757	False	NA	-3	True	NA	NA	NA	104360262	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269644_104314747_104316120_104358464_104358579_104360243
ES.6555.26	chr11	-	5789	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-1	intron_retention	FALSE	canonical	3	66	junction_13	56.7285657981479	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGTCAGGCTTTTCTT	9750	False	NA	-3	True	NA	NA	NA	104360269	104224327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.27	chr11	-	3987	13	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-123	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	71.1595917638655	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	8046	False	NA	-4	True	NA	NA	NA	104333240	104224328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104332550
ES.6555.28	chr11	-	5065	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-685	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_14	74.8413628405893	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	7484	False	NA	-4	True	NA	NA	NA	104333802	104224328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104333451
ES.6555.29	chr11	-	4168	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-115	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	66.0193624099608	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	8054	False	NA	-4	True	NA	NA	NA	104333232	104224328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104332550
ES.6555.3	chr11	-	3634	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	70.3627626472052	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTTTTCTTGATACAC	9750	False	NA	4	True	NA	NA	NA	104360269	104224320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104358464_104358579_104360243
ES.6555.30	chr11	-	5354	15	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	17	-2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	76.0375846914819	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	8186	False	NA	-4	True	NA	NA	NA	104333100	104224328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.31	chr11	-	5044	17	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-583	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	71.3474936052417	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTGTCAGGCTTTTCT	9749	False	NA	-4	True	NA	NA	NA	104360270	104224328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.32	chr11	-	5389	14	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-208	-3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_13	80.9160570222231	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	7961	False	NA	-5	True	NA	NA	NA	104333325	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.33	chr11	-	3365	10	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-37444	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	79.0228908858099	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	NA	False	NA	-5	True	NA	NA	NA	104269569	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233348_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510
ES.6555.34	chr11	-	4636	14	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-122	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.3851798075375	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	8636	False	NA	-5	True	NA	NA	NA	104332650	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226394_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.35	chr11	-	4759	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-587	-3	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_13	82.7458920615472	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	9745	False	NA	-5	True	NA	NA	NA	104360274	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.36	chr11	-	5408	15	NNC	ENSMUSG00000018412.17	novel	5222	15	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	64.3563500823219	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	8742	False	NA	-5	True	NA	NA	NA	104332544	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104331993
ES.6555.37	chr11	-	6307	13	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-581	-3	intron_retention	FALSE	canonical	3	66	junction_12	58.8762237428847	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTTTGTCAGGCTTTTC	9751	False	NA	-5	True	NA	NA	NA	104360268	104224329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104227160_104227374_104227433_104228951_104229074_104233188_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.38	chr11	-	4942	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	78.2231565600764	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTTGTCAGGCTTTT	9750	False	NA	-6	True	NA	NA	NA	104360269	104224330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.39	chr11	-	4895	16	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-575	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	82.6197716449681	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTTGTCAGGCTTTT	9757	False	NA	-6	True	NA	NA	NA	104360262	104224330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104326646_104326742_104358464_104358579_104360243
ES.6555.4	chr11	-	5362	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	-123	271	-123	1	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCAGGCTTTTCTTGA	8046	False	NA	-1	True	NA	NA	NA	104333240	104224325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.43	chr11	-	3985	9	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	15244	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	93.2938904752074	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTTTTGTCAGGCTTT	NA	False	NA	-7	True	NA	NA	NA	104317284	104224331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104314747_104316120_104317249
ES.6555.44	chr11	-	3531	13	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-481	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.2136525389863	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGTTTTGTCAGGCTTT	7688	False	NA	-7	True	NA	NA	NA	104333598	104224331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104333451
ES.6555.46	chr11	-	4787	13	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-603	-10	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	76.5509997031754	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7566	False	NA	-56	True	NA	NA	NA	104333720	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104333451
ES.6555.47	chr11	-	2514	4	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-546	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.249906785864	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9786	False	NA	-56	True	NA	NA	NA	104360233	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104225839_104315999_104316120_104358464_104358579_104359411
ES.6555.49	chr11	-	5215	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-698	-10	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_15	70.3500454078666	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7471	False	NA	-56	True	NA	NA	NA	104333815	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104333451
ES.6555.5	chr11	-	5198	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-672	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	61.7770844509945	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7497	False	NA	-2	True	NA	NA	NA	104333789	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104333451
ES.6555.50	chr11	-	5555	11	NIC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-123	-10	intron_retention	FALSE	canonical	0	0	junction_8	80.621895289059	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7436	False	NA	-56	True	NA	NA	NA	104359810	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104269510_104269653_104314747_104316120_104358464
ES.6555.53	chr11	-	4881	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-160	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	86.5188725430611	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8598	False	NA	-56	True	NA	NA	NA	104332688	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269644_104314747_104316120_104317249_104317295_104332550
ES.6555.54	chr11	-	5731	10	ISM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	81968	326	-19024	-10	3prime_fragment	FALSE	canonical	3	79	junction_6	49.0791751366989	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	-56	True	NA	NA	NA	104251149	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306
ES.6555.55	chr11	-	3385	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	75.1893861325004	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104358464_104358579_104360243
ES.6555.56	chr11	-	4846	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-581	-10	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	82.5147173019975	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7588	False	NA	-56	True	NA	NA	NA	104333698	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233726_104233833_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104333451
ES.6555.57	chr11	-	4516	13	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	82.1314579737197	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104314747_104316120_104358464_104358579_104360243
ES.6555.58	chr11	-	5809	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-89	-10	intron_retention	FALSE	canonical	3	85	junction_13	48.3200621105444	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8080	False	NA	-56	True	NA	NA	NA	104333206	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.6	chr11	-	5960	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-632	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_11	60.3367277042696	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7537	False	NA	-2	True	NA	NA	NA	104333749	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.61	chr11	-	3279	13	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-575	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	83.9483968479049	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9757	False	NA	-56	True	NA	NA	NA	104360262	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104358464_104358579_104360243
ES.6555.62	chr11	-	5489	13	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-10	intron_retention	FALSE	canonical	0	0	junction_7	72.8872797925369	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.63	chr11	-	5286	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-575	-10	intron_retention	FALSE	canonical	3	66	junction_14	57.3356123973538	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9757	False	NA	-56	True	NA	NA	NA	104360262	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.64	chr11	-	4065	12	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	17398	-10	intron_retention	FALSE	canonical	3	61	junction_10	54.731198892692	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	-56	True	NA	NA	NA	104315130	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747
ES.6555.65	chr11	-	4506	3	NIC	ENSMUSG00000018412.17	novel	926	6	NA	NA	1479	-10	intron_retention	FALSE	canonical	3	206	junction_2	30.5	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	-56	True	NA	NA	NA	104230646	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104227433_104228951
ES.6555.66	chr11	-	5679	13	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	22	-10	intron_retention	TRUE	canonical	0	0	junction_8	70.1571153435867	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8191	False	NA	-56	True	NA	NA	NA	104333095	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.67	chr11	-	3197	3	NNC	ENSMUSG00000018412.17	novel	926	6	NA	NA	4095	-10	intron_retention	TRUE	non_canonical	0	0	junction_2	133.5	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	-56	True	NA	NA	NA	104228030	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104227705_104227916
ES.6555.68	chr11	-	4847	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	-10	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	65.9480314880047	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9750	False	NA	-56	True	NA	NA	NA	104360269	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.69	chr11	-	3658	14	NIC	ENSMUSG00000018412.17	novel	5222	15	NA	NA	182	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	66.4339330133427	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8940	False	NA	-56	True	NA	NA	NA	104332346	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104332122
ES.6555.7	chr11	-	5549	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	-122	0	-122	0	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8047	False	NA	-2	True	NA	NA	NA	104333239	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.70	chr11	-	5298	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-71	-10	intron_retention	FALSE	canonical	3	85	junction_13	47.2401644376337	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8687	False	NA	-56	True	NA	NA	NA	104332599	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.71	chr11	-	3436	13	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-525	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	71.5779974728423	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7644	False	NA	-56	True	NA	NA	NA	104333642	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104333451
ES.6555.72	chr11	-	5047	15	FSM	ENSMUSG00000018412.17	ENSMUST00000018556.11	5061	15	-40	54	-40	-10	multi-exon	FALSE	canonical	1	2	junction_14	71.2238494796081	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7519	False	NA	-56	True	NA	NA	NA	104359727	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104359411
ES.6555.73	chr11	-	5295	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-407	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.6418506710216	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	9925	False	NA	-56	True	NA	NA	NA	104360094	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226407_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104359411
ES.6555.74	chr11	-	5353	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-122	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	70.7882917474402	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8047	False	NA	-56	True	NA	NA	NA	104333239	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104314747_104316120_104332550
ES.6555.77	chr11	-	3708	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-608	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	66.4339330133427	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	7561	False	NA	-56	True	NA	NA	NA	104333725	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104333451
ES.6555.79	chr11	-	4007	13	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-105	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	75.834752733969	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	8064	False	NA	-56	True	NA	NA	NA	104333222	104224380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104332550
ES.6555.8	chr11	-	3883	12	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-116	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	81.5662788855767	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8053	False	NA	-2	True	NA	NA	NA	104333233	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104332550
ES.6555.83	chr11	-	5412	16	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-145	-161	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	68.0631732698054	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATTTTGTAAATATTT	8024	False	NA	NA	False	NA	NA	NA	104333262	104224531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.84	chr11	-	4605	15	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-581	-161	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_14	61.3522782039618	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATTTTGTAAATATTT	9751	False	NA	NA	False	NA	NA	NA	104360268	104224531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.85	chr11	-	4740	14	NNC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	-662	-161	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	83.0648851677349	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATTTTGTAAATATTT	7507	False	NA	NA	False	NA	NA	NA	104333779	104224531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104317249_104317295_104333451
ES.6555.86	chr11	-	3362	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-582	73	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	81.1953594150093	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTGGTTTGGTTTTG	9750	False	NA	NA	False	NA	NA	NA	104360269	104225673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229071_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.87	chr11	-	3690	17	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-574	73	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	71.3474936052417	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTGGTTTGGTTTTG	9758	False	NA	NA	False	NA	NA	NA	104360261	104225673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.88	chr11	-	3772	13	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	18	71	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTGGTTTGGTTT	8187	False	NA	NA	False	NA	NA	NA	104333099	104225675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
ES.6555.89	chr11	-	3552	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-582	71	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	65.9480314880047	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTGGTTTGGTTT	9750	False	NA	NA	False	NA	NA	NA	104360269	104225675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.9	chr11	-	4716	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-586	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	70.7434735735703	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9746	False	NA	-2	True	NA	NA	NA	104360273	104224326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.91	chr11	-	3534	16	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-609	71	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	75.5451299996675	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTGGTTTGGTTT	9723	False	NA	NA	False	NA	NA	NA	104360296	104225675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104358464_104358579_104360243
ES.6555.92	chr11	-	3940	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	72	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.5730654566532	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACATCATATGCTGGAA	8241	False	NA	NA	False	ATTAAA	-27	NA	104333045	104225734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227053_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.93	chr11	-	3987	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	22	1418	22	2	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTGATATTCAAACATCA	8191	False	NA	NA	False	ATTAAA	-17	NA	104333095	104225744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.94	chr11	-	4139	16	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-86	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	68.0631732698054	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTTTGATATTCAAACATC	8083	False	NA	NA	False	ATTAAA	-16	NA	104333203	104225745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.95	chr11	-	3872	15	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	3	22	junction_14	72.5383783009423	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCGTTTGATATTCAAAC	8158	False	NA	NA	False	ATTAAA	-13	NA	104333128	104225748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104317249_104317295_104332550
ES.6555.96	chr11	-	3335	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	481	1694	-108	-2	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCGTTTGATATTCAAAC	8650	False	NA	NA	False	ATTAAA	-13	NA	104332636	104225748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ES.6555.98	chr11	-	3570	16	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-575	-3	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_15	56.9102997903035	543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCGTTTGATATTCAAA	9757	False	NA	NA	False	ATTAAA	-12	NA	104360262	104225749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104360243
ES.6555.99	chr11	-	3871	16	NIC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-45	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	66.7590692964883	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCGTTTGATATTCAA	7514	False	NA	NA	False	ATTAAA	-11	NA	104359732	104225750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104359411
ES.6556.1	chr11	-	138	1	Intergenic	novelGene_5269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAAAAGTAAAATGTA	NA	False	NA	NA	False	NA	NA	NA	104392101	104391963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104392000_104392100
ES.6557.1	chr11	+	4446	1	Intergenic	novelGene_5273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATGTAAAGTGGATCAAA	NA	False	NA	NA	False	NA	NA	NA	104428704	104433150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104428700_104433200
ES.6558.1	chr11	-	5830	19	FSM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	-248	-2422	-20	230	multi-exon	FALSE	canonical	3	32	junction_11	53.6541278197565	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTAGAATATATTATT	2046	False	NA	NA	False	AATAAA	-26	NA	104441466	104393340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.10	chr11	-	5764	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-21	221	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	67.2413196013314	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2045	False	NA	NA	False	AATAAA	-17	NA	104441467	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.100	chr11	-	4524	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	549	intron_retention	FALSE	non_canonical	0	0	junction_8	74.1533527440492	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTAAATTGTGTATCT	2066	False	NA	-7	True	TATAAA	-39	NA	104441446	104395213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411658_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441186
ES.6558.101	chr11	-	3297	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	67.1737428493832	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTGTTGATCATTGTT	2097	False	NA	NA	False	NA	NA	NA	104441415	104395767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.102	chr11	-	3151	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	67.4736345399052	422	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTTGATCATTGT	2067	False	NA	NA	False	NA	NA	NA	104441445	104395768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419204_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.103	chr11	-	3199	19	FSM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	-228	189	0	-189	multi-exon	FALSE	canonical	3	32	junction_11	53.6541278197565	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTAAAGTTCATTGCCA	2066	False	NA	NA	False	AATAAA	-16	NA	104441446	104395951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.104	chr11	-	2890	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	31	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.9607729993315	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTAAAGTTCATTGCCA	2097	False	NA	NA	False	AATAAA	-16	NA	104441415	104395951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412270_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.105	chr11	-	3168	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-126	2383	11	-191	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAGTAAAGTTCATTGC	2077	False	NA	NA	False	AATAAA	-14	NA	104441435	104395953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.106	chr11	-	3073	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-7	-192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	55.8263677246992	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTAAAGTTCATTG	2059	False	NA	NA	False	AATAAA	-13	NA	104441453	104395954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411551_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.107	chr11	-	3915	17	NIC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	-8	-192	intron_retention	FALSE	canonical	3	32	junction_11	56.4002160900116	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTAAAGTTCATTG	2058	False	NA	NA	False	AATAAA	-13	NA	104441454	104395954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.108	chr11	-	2876	17	NIC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	-192	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	80.3748055985207	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTAAAGTTCATTG	2067	False	NA	NA	False	AATAAA	-13	NA	104441445	104395954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.110	chr11	-	1308	1	Intergenic	novelGene_5270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGGCAGATCTCTGT	NA	False	NA	NA	False	NA	NA	NA	104405550	104404242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104404200_104405600
ES.6558.111	chr11	-	180	1	Intergenic	novelGene_5271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	376	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAGAAAAAAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	104404969	104404789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104404800_104405000
ES.6558.112	chr11	-	175	1	Intergenic	novelGene_5272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTATGC	6346	False	NA	NA	False	NA	NA	NA	104410694	104410519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104410500_104410700
ES.6558.113	chr11	-	1735	11	ISM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-136	18512	1	-1003	5prime_fragment	FALSE	canonical	3	170	junction_6	29.5323551380516	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTTTATGTTTTAAAA	2067	False	NA	NA	False	ATTAAA	-14	NA	104441445	104412082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.14	chr11	-	6000	20	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	221	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	72.0637606260447	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2067	False	NA	NA	False	AATAAA	-17	NA	104441445	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104438666_104438888_104441188
ES.6558.16	chr11	-	5763	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	221	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	76.3218695904246	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2067	False	NA	NA	False	AATAAA	-17	NA	104441445	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.17	chr11	-	6459	16	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	17373	218	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_8	35.7376863020289	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCAATGGTAATTTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	104423845	104393352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555
ES.6558.18	chr11	-	4835	5	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1588	214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.1235263402404	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	1082	False	NA	NA	False	AATAAA	-10	NA	104402514	104393356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401360_104401424
ES.6558.20	chr11	-	5676	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	33	214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.7462742265207	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2099	False	NA	NA	False	AATAAA	-10	NA	104441413	104393356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398057_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.22	chr11	-	5645	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	31	214	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	63.2860691085319	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCCAATGGTAATT	2097	False	NA	NA	False	AATAAA	-10	NA	104441415	104393356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.23	chr11	-	5561	18	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	212	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	67.5939945326936	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAATCCAATGGTAA	2066	False	NA	NA	False	AATAAA	-8	NA	104441446	104393358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.24	chr11	-	5694	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	212	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	59.8772099952612	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAATCCAATGGTAA	2067	False	NA	NA	False	AATAAA	-8	NA	104441445	104393358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104441188
ES.6558.25	chr11	-	5780	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	0	212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	69.4204625257132	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAATCCAATGGTAA	2066	False	NA	NA	False	AATAAA	-8	NA	104441446	104393358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425703_104427420_104427497_104441188
ES.6558.26	chr11	-	5383	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	11	202	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	62.1560536070301	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACTATGACAAAAAAAT	2077	False	NA	NA	False	ATTAAA	-39	NA	104441435	104393368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.27	chr11	-	5674	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-5	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	71.5028273635921	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTGTCATCTGCAT	2061	False	NA	-4	True	AATAAA	-44	NA	104441451	104393542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412205_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.28	chr11	-	5531	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.9607729993315	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTGTTAAAGCTATGTAA	2067	False	NA	-22	True	AATAAA	-26	NA	104441445	104393560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412490_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.29	chr11	-	5529	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	67.2413196013314	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTGTTAAAGCTATGT	2067	False	NA	-24	True	AATAAA	-24	NA	104441445	104393562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.30	chr11	-	5597	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-164	-8	-27	8	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTGTTAAAGCTATGT	2039	False	NA	-24	True	AATAAA	-24	NA	104441473	104393562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.31	chr11	-	5622	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	-37	8	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	53.7478394627503	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTGTTAAAGCTATGT	2029	False	NA	-24	True	AATAAA	-24	NA	104441483	104393562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.33	chr11	-	5471	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-18	6	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGGTGTTAAAGCTAT	2048	False	NA	-26	True	AATAAA	-22	NA	104441464	104393564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.35	chr11	-	4700	6	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-4117	6	intron_retention	FALSE	canonical	3	203	junction_2	11.4087685575613	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGGTGTTAAAGCTAT	8821	False	NA	-26	True	AATAAA	-22	NA	104408219	104393564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201
ES.6558.38	chr11	-	5274	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	62.85172904344	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGGTGTTAAAGCTAT	2071	False	NA	-26	True	AATAAA	-22	NA	104441441	104393564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.39	chr11	-	5355	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.7462742265207	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAGGTGTTAAAGCTAT	2212	False	NA	-26	True	AATAAA	-22	NA	104441300	104393564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398057_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.4	chr11	-	5805	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-159	-221	-22	221	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2044	False	NA	NA	False	AATAAA	-17	NA	104441468	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.41	chr11	-	5565	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	74.6142559919472	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAAGGTGTTAAAGCTA	2067	False	NA	-27	True	AATAAA	-21	NA	104441445	104393565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104441188
ES.6558.42	chr11	-	5513	20	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	33	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	76.8553341172327	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAAGGTGTTAAAGCTA	2099	False	NA	-27	True	AATAAA	-21	NA	104441413	104393565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104423813_104423911_104425563_104425712_104427420_104427497_104441303
ES.6558.43	chr11	-	5345	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	67.5403171775529	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAAGGTGTTAAAGCTA	2073	False	NA	-27	True	AATAAA	-21	NA	104441439	104393565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419204_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.46	chr11	-	5275	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.7559440001136	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCAAGGTGTTAAAGCT	2077	False	NA	-28	True	AATAAA	-20	NA	104441435	104393566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398057_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.47	chr11	-	5383	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	58.7417667057209	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCAAGGTGTTAAAGC	2147	False	NA	-29	True	AATAAA	-19	NA	104441365	104393567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.48	chr11	-	5545	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	76.3218695904246	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCAAGGTGTTAAAGC	2067	False	NA	-29	True	AATAAA	-19	NA	104441445	104393567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.49	chr11	-	5318	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.6091340313297	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCAAGGTGTTAAAGC	2067	False	NA	-29	True	AATAAA	-19	NA	104441445	104393567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104406325_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.5	chr11	-	5719	18	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-34	221	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	58.6546399017752	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2032	False	NA	NA	False	AATAAA	-17	NA	104441480	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.50	chr11	-	5159	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	62.1560536070301	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2099	False	NA	-32	True	AATAAA	-16	NA	104441413	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.51	chr11	-	5487	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	33	0	intron_retention	FALSE	canonical	0	0	junction_9	61.3262871435218	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2099	False	NA	-32	True	AATAAA	-16	NA	104441413	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412270_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.52	chr11	-	5542	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	59.244132907408	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2066	False	NA	-32	True	AATAAA	-16	NA	104441446	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417784_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.56	chr11	-	5554	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-7	0	intron_retention	FALSE	canonical	3	52	junction_17	51.8346452657582	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2059	False	NA	-32	True	AATAAA	-16	NA	104441453	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.57	chr11	-	5261	18	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	66.5380188950461	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2044	False	NA	-32	True	AATAAA	-16	NA	104441468	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.59	chr11	-	5219	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.6173923303573	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2067	False	NA	-32	True	AATAAA	-16	NA	104441445	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396437_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.6	chr11	-	5667	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	221	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2067	False	NA	NA	False	AATAAA	-17	NA	104441445	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.60	chr11	-	5453	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	73.8483807089454	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2076	False	NA	-32	True	AATAAA	-16	NA	104441436	104393570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419317_104419403_104419447_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.61	chr11	-	5653	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	69.6386617467377	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2067	False	NA	-33	True	AATAAA	-15	NA	104441445	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.62	chr11	-	5402	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	59.6795196171048	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2077	False	NA	-33	True	AATAAA	-15	NA	104441435	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412270_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.63	chr11	-	5234	17	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.6598161828605	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2067	False	NA	-33	True	AATAAA	-15	NA	104441445	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104406325_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.65	chr11	-	5323	18	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	30	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	56.8020907066854	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2096	False	NA	-33	True	AATAAA	-15	NA	104441416	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.66	chr11	-	7557	16	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	-1	intron_retention	FALSE	canonical	3	109	junction_8	37.6437098183599	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2066	False	NA	-33	True	AATAAA	-15	NA	104441446	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.69	chr11	-	5434	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	34	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67.7085256407525	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATAATCAAGGTGTTA	2100	False	NA	-33	True	AATAAA	-15	NA	104441412	104393571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396529_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.7	chr11	-	5775	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-8	221	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	59.5329559110429	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2058	False	NA	NA	False	AATAAA	-17	NA	104441454	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413636_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.70	chr11	-	5508	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	73.7208331862489	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTATAATCAAGGTGT	2097	False	NA	-35	True	AATAAA	-13	NA	104441415	104393573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417882_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.71	chr11	-	5476	18	NIC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	70.0861062104111	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGTTTATAATCAAGG	2066	False	NA	-38	True	AATAAA	-10	NA	104441446	104393576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.72	chr11	-	6081	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	21	-15	intron_retention	FALSE	canonical	0	0	junction_9	61.0848295518952	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTGAAAGCAGTTTA	2087	False	NA	-47	True	AATAAA	-1	NA	104441425	104393585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412365_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.73	chr11	-	5456	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.9607729993315	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTGAAAGCAGTTTA	2067	False	NA	-47	True	AATAAA	-1	NA	104441445	104393585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412440_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.74	chr11	-	5449	19	NIC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	-15	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	63.2123600978148	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTTGAAAGCAGTTTA	2067	False	NA	-47	True	AATAAA	-1	NA	104441445	104393585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.75	chr11	-	5317	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	4	-123	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCTTTTCCTGACTT	2070	False	NA	-155	True	NA	NA	NA	104441442	104393693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.76	chr11	-	5309	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-159	275	-22	-275	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCGAAGTCTCTGATT	2044	False	NA	NA	False	ATTAAA	-21	NA	104441468	104393845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.77	chr11	-	5173	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	63	-275	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	58.7340995031374	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCGAAGTCTCTGATT	2129	False	NA	NA	False	ATTAAA	-21	NA	104441383	104393845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416945_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.79	chr11	-	5275	19	FSM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	-198	-1917	30	-275	multi-exon	FALSE	canonical	3	32	junction_11	53.6541278197565	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCGAAGTCTCTGATT	2096	False	NA	NA	False	ATTAAA	-21	NA	104441416	104393845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.8	chr11	-	5576	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-8	221	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	67.5403171775529	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2058	False	NA	NA	False	AATAAA	-17	NA	104441454	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419204_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.80	chr11	-	5128	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	40	-276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	67.3300329224138	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTCGAAGTCTCTGAT	2106	False	NA	NA	False	ATTAAA	-20	NA	104441406	104393846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403729_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.82	chr11	-	5953	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	35	-282	intron_retention	FALSE	canonical	3	108	junction_8	37.180671641997	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACAGTTTCGAAGTC	2101	False	NA	NA	False	ATTAAA	-14	NA	104441411	104393852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.83	chr11	-	4384	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-144	1185	-7	1007	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATAGGCTAGCACTTC	2059	False	NA	NA	False	AATAAA	-17	NA	104441453	104394755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.84	chr11	-	3991	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	31	1007	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	60.271132186147	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATAGGCTAGCACTTC	2097	False	NA	NA	False	AATAAA	-17	NA	104441415	104394755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104441316
ES.6558.85	chr11	-	4378	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	-20	1007	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	76.3218695904246	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATAGGCTAGCACTTC	2046	False	NA	NA	False	AATAAA	-17	NA	104441466	104394755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.86	chr11	-	4268	19	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	-12	1001	combination_of_known_junctions	FALSE	canonical	3	52	junction_18	50.2831488843767	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCCATAGGCTAG	2054	False	NA	NA	False	AATAAA	-11	NA	104441458	104394761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.87	chr11	-	4454	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	10	1001	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	69.6386617467377	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCCATAGGCTAG	2076	False	NA	NA	False	AATAAA	-11	NA	104441436	104394761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417882_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.88	chr11	-	4107	17	NIC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	33	1001	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	62.7184930861704	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCCCATAGGCTAG	2099	False	NA	NA	False	AATAAA	-11	NA	104441413	104394761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.89	chr11	-	4132	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-116	1409	21	783	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGCCTGTAGACTCA	2087	False	NA	NA	False	NA	NA	NA	104441425	104394979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.9	chr11	-	5281	17	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	17	221	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_12	71.4466584243098	440	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	2083	False	NA	NA	False	AATAAA	-17	NA	104441429	104393349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.91	chr11	-	4046	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	778	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	58.7417667057209	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTAGCCTGTAG	2067	False	NA	NA	False	NA	NA	NA	104441445	104394984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.92	chr11	-	4077	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	64	778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	57.1464708954321	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTTAGCCTGTAG	2130	False	NA	NA	False	NA	NA	NA	104441382	104394984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408347_104411485_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.93	chr11	-	4028	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	777	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGTTTTAGCCTGTA	2067	False	NA	NA	False	NA	NA	NA	104441445	104394985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.95	chr11	-	3928	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	-136	1633	1	559	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCTCCTTTATTGT	2067	False	NA	3	True	TTTAAA	-11	NA	104441445	104395203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.96	chr11	-	3810	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	1	559	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCTCCTTTATTGT	2067	False	NA	3	True	TTTAAA	-11	NA	104441445	104395203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
ES.6558.97	chr11	-	3814	18	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	32	554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	61.451981422581	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTGTGTATCTCCTTT	2098	False	NA	-2	True	TATAAA	-44	NA	104441414	104395208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6558.99	chr11	-	3938	19	NNC	ENSMUSG00000020687.14	novel	3160	19	NA	NA	1	554	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	53.7478394627503	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTGTGTATCTCCTTT	2067	False	NA	-2	True	TATAAA	-44	NA	104441445	104395208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ES.6559.1	chr11	+	662	6	NNC	ENSMUSG00000061086.13	novel	3273	3	NA	NA	798	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	20.0499376557634	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCTCCGTTGATTTGTT	NA	False	NA	10	True	AATAAA	-24	NA	104473662	104478039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104473749_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ES.6559.10	chr11	+	4843	10	NNC	ENSMUSG00000020689.5	novel	5784	15	NA	NA	2550	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.94002951316607	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGCCTGAGACTACCC	3687	False	NA	NA	False	ATTAAA	-15	NA	104530764	104561299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104530862_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556449_104557905
ES.6559.11	chr11	+	4856	10	NNC	ENSMUSG00000020689.5	novel	5784	15	NA	NA	2550	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.92160768674447	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGAGACTACCCCAT	3687	False	NA	NA	False	ATTAAA	-18	NA	104530764	104561302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104530862_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ES.6559.2	chr11	+	626	5	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3603	-4	-1036	-2	3prime_fragment	FALSE	canonical	1	3	junction_1	17.5267652463311	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCTCCGTTGATTTGTT	NA	False	NA	10	True	AATAAA	-24	NA	104474753	104478039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ES.6559.3	chr11	+	6013	16	Fusion	ENSMUSG00000020689.5_ENSMUSG00000061086.13	novel	3273	3	NA	NA	-654	13	multi-exon	FALSE	canonical	1	1	junction_2	9.20772622433043	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCATGTTGTTAGATCTG	NA	False	NA	NA	False	ATTAAA	-31	NA	104475135	104561315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_104475439_104475762_104475841_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ES.6559.4	chr11	+	487	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	4053	-4	-586	-2	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCTCCGTTGATTTGTT	NA	False	NA	10	True	AATAAA	-24	NA	104475203	104478039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
ES.6559.5	chr11	+	5777	15	FSM	ENSMUSG00000020689.5	ENSMUST00000021028.5	5784	15	4	3	4	-3	multi-exon	TRUE	canonical	2	6	junction_5	3.08716896928204	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGGCCTGAGACTACCC	NA	False	NA	NA	False	ATTAAA	-15	NA	104498829	104561299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_104498991_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ES.6559.7	chr11	+	2597	15	FSM	ENSMUSG00000020689.5	ENSMUST00000021028.5	5784	15	59	3128	59	-2465	multi-exon	FALSE	canonical	2	6	junction_5	3.08716896928204	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTGATGTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	104498884	104558174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_104498991_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ES.6559.8	chr11	+	5756	15	NNC	ENSMUSG00000020689.5	novel	5784	15	NA	NA	11627	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.25464931766727	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCTGAGACTACCCCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	104510452	104561302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_104510592_104514238_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ES.656.1	chr1	-	687	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	-45	-29	-45	29	multi-exon	FALSE	canonical	3	39	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATTTGCTTCTGTTTTT	7575	False	NA	-5	True	AATAAA	-23	NA	65102656	65101001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_65101342_65102217_65102461_65102552
ES.6560.1	chr11	-	181	1	Intergenic	novelGene_5274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAACATAAAAAATAGCCA	6441	False	NA	NA	False	NA	NA	NA	104539483	104539302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104539300_104539500
ES.6561.1	chr11	-	181	1	Intergenic	novelGene_5275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTATTTTATTTC	NA	False	NA	NA	False	NA	NA	NA	104572359	104572178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104572200_104572400
ES.6562.1	chr11	-	183	1	Intergenic	novelGene_5276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	104582624	104582441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104582400_104582600
ES.6563.1	chr11	-	180	1	Intergenic	novelGene_5277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	104587446	104587266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104587300_104587400
ES.6564.1	chr11	-	173	1	Intergenic	novelGene_5278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACATATATAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	104657571	104657398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104657400_104657600
ES.6565.1	chr11	+	178	1	Intergenic	novelGene_5279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	104794363	104794541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104794400_104794500
ES.6566.1	chr11	-	177	1	Intergenic	novelGene_5280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATGGAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	104816960	104816783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_104816800_104817000
ES.6567.1	chr11	+	184	1	Intergenic	novelGene_5281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	104994527	104994711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_104994500_104994700
ES.6568.1	chr11	+	2631	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	-6	-758	-6	758	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGTGGCTTAATTTA	NA	False	NA	10	True	AATAAA	-20	NA	105017244	105031978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.10	chr11	+	1840	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	54	-27	0	27	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTAACACATTTGAGA	NA	False	NA	NA	False	NA	NA	NA	105017304	105031247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.11	chr11	+	2590	7	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	1	749	intron_retention	FALSE	canonical	2	6	junction_4	95.0112566430362	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTTTTTGGTGGTGTGG	NA	False	NA	1	True	AATAAA	-11	NA	105017305	105031969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105026163_105026271_105028544_105028611_105030386
ES.6568.12	chr11	+	5801	7	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	7	751	intron_retention	FALSE	canonical	3	226	junction_4	22.4456132808965	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017311	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017433_105017601_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.13	chr11	+	1836	1	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	8	-7334	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTACAAGGGAAAATAATTA	NA	False	NA	NA	False	NA	NA	NA	105017312	105019148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017300_105019100
ES.6568.14	chr11	+	9529	4	NIC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	12	751	intron_retention	FALSE	canonical	3	237	junction_1	20.9496751499609	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017316	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105021323_105022398_105026271_105028544_105028611_105030386
ES.6568.15	chr11	+	1895	7	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	12	260	intron_retention	FALSE	canonical	1	6	junction_1	95.2460264554672	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017316	105031480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017694_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.16	chr11	+	2257	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	12	287	intron_retention	FALSE	canonical	3	226	junction_5	20.985903918233	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105017316	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.17	chr11	+	2642	10	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	13	751	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	107.462080593259	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017317	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105029386_105029478_105030386
ES.6568.18	chr11	+	4284	7	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	13	751	intron_retention	FALSE	canonical	2	6	junction_4	95.9212640079815	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017317	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017433_105017601_105019902_105021272_105021323_105022398_105022460_105026163_105026271_105028544_105028611_105030386
ES.6568.19	chr11	+	1972	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	13	287	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81.7370020247868	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105017317	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017433_105017601_105017694_105019681_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.2	chr11	+	1466	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	17	384	17	-384	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAATGCGTATTTTCTG	NA	False	NA	NA	False	AAAAAG	-21	NA	105017267	105030836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.20	chr11	+	5963	6	NIC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	13	750	intron_retention	FALSE	canonical	3	226	junction_3	22.7912263820971	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTTTGGTGGTGTGGC	NA	False	NA	2	True	AATAAA	-12	NA	105017317	105031970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.21	chr11	+	2178	10	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	13	287	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	107.462080593259	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105017317	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105029386_105029478_105030386
ES.6568.22	chr11	+	3932	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	14	260	intron_retention	FALSE	canonical	3	226	junction_5	22.0611395342811	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017318	105031480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017433_105017601_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.24	chr11	+	4588	7	NIC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	18	751	intron_retention	FALSE	canonical	3	226	junction_4	21.792582836063	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017322	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.25	chr11	+	2135	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	23	260	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	85.2540321627077	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105017327	105031480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017518_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.26	chr11	+	2707	10	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	26	751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.251536070988	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017330	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017433_105017601_105017694_105018620_105018790_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.27	chr11	+	2406	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	43	751	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81.7370020247868	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017347	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105017433_105017601_105017694_105019681_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.28	chr11	+	2093	7	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	86	751	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	100.280717100658	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017390	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017433_105017601_105017694_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.29	chr11	+	3509	8	NNC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	320	751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.6308953043799	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105017624	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105018790_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.3	chr11	+	2134	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	20	-287	20	287	multi-exon	FALSE	canonical	3	226	junction_6	21.0698243941424	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105017270	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.30	chr11	+	1894	5	NNC	ENSMUSG00000020691.14	novel	2556	8	NA	NA	2514	751	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.993902287878	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTGGTGGTGTGGCT	NA	False	NA	3	True	AATAAA	-13	NA	105019818	105031971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105019858_105026157_105026271_105028544_105028611_105029386_105029478_105030386
ES.6568.31	chr11	+	3345	1	Genic_Genomic	ENSMUSG00000020691.14	novel	NA	NA	NA	NA	-226	287	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105028162	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_105028200_105031500
ES.6568.32	chr11	+	2658	1	Genic_Genomic	ENSMUSG00000020691.14	novel	NA	NA	NA	NA	905	731	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAATTTTCTAT	NA	False	NA	-17	True	NA	NA	NA	105029293	105031951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_105029300_105032000
ES.6568.33	chr11	+	174	1	ISM	ENSMUSG00000020691.14	ENSMUST00000132185.2	726	4	6343	16	1229	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105029617	105029791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105029600_105029800
ES.6568.5	chr11	+	2767	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	22	753	intron_retention	FALSE	canonical	3	226	junction_5	20.985903918233	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGGTGGTGTGGCTTA	NA	False	NA	5	True	AATAAA	-15	NA	105017272	105031973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.6	chr11	+	1686	2	ISM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	43	12072	-11	-7334	5prime_fragment	FALSE	canonical	3	278	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTACAAGGGAAAATAATTA	NA	False	NA	NA	False	NA	NA	NA	105017293	105019148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105017433_105017601
ES.6568.7	chr11	+	3319	8	FSM	ENSMUSG00000020691.14	ENSMUST00000136214.8	2556	8	-6	-757	-6	757	multi-exon	FALSE	canonical	2	5	junction_1	88.9260183225015	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGTGTGGCTTAATTT	NA	False	NA	9	True	AATAAA	-19	NA	105017298	105031977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105018268_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.8	chr11	+	4440	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	-2	752	intron_retention	FALSE	canonical	3	226	junction_5	22.0611395342811	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGGTGGTGTGGCTT	NA	False	NA	4	True	AATAAA	-14	NA	105017302	105031972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105017433_105017601_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6568.9	chr11	+	2845	8	FSM	ENSMUSG00000020691.14	ENSMUST00000136214.8	2556	8	-2	-287	-2	287	multi-exon	FALSE	canonical	2	5	junction_1	88.9260183225015	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGTCAGCACAGGGAT	NA	False	NA	NA	False	NA	NA	NA	105017302	105031507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105018268_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ES.6569.1	chr11	+	157	1	Intergenic	novelGene_5282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	105039764	105039921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105039800_105039900
ES.657.1	chr1	-	894	3	FSM	ENSMUSG00000025952.16	ENSMUST00000027089.15	783	3	-120	9	-120	-3	multi-exon	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGACTTCTGTTATT	568	False	NA	-3	True	AATAAA	-23	NA	65112968	65110692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_65111031_65112320_65112564_65112655
ES.6570.1	chr11	+	3595	1	Antisense	novelGene_ENSMUSG00000081965.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAATCTGGTTTAAATG	NA	False	NA	NA	False	NA	NA	NA	105055552	105059147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_105055600_105059100
ES.6571.1	chr11	-	4164	1	FSM	ENSMUSG00000081965.2	ENSMUST00000118770.2	1845	1	-429	-1890	-429	1890	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTCTGGCGTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	105057875	105053711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105053700_105057900
ES.6572.1	chr11	+	201	1	Intergenic	novelGene_5283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTGTAACATTGAAGAT	NA	False	NA	NA	False	NA	NA	NA	105066119	105066320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105066100_105066300
ES.6573.1	chr11	+	3114	20	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	13	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	97.6669392626325	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105071584	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105071713_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.10	chr11	+	5209	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	27	-281	intron_retention	FALSE	canonical	3	218	junction_5	57.5589785444489	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTATTAGCGAGTACGTG	NA	False	NA	NA	False	CATAAA	-7	NA	105072379	105172721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105101467_105112011_105112180_105131186_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.11	chr11	+	3575	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	29	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	84.4375508882156	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105072381	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.12	chr11	+	3476	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	96.5630418567662	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072383	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.13	chr11	+	3391	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	31	277	31	-276	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCGAGTACGTGGCAAT	NA	False	NA	NA	False	CATAAA	-12	NA	105072383	105172726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.14	chr11	+	3462	20	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	31	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	100.296540926812	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105072383	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.15	chr11	+	3471	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	40	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	89.777533604829	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105072392	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.16	chr11	+	3378	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.6870266080322	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCTCCTGGATTCTCT	NA	False	NA	23	True	AATAAA	-16	NA	105072396	105173000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072572_105072845_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.17	chr11	+	2884	19	ISM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-343	5699	47	18	5prime_fragment	FALSE	canonical	3	73	junction_5	77.9279502623979	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCGTGTGTGCTTGTG	NA	False	NA	11	True	AATAAA	-13	NA	105072399	105167303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.18	chr11	+	3192	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	47	460	47	-459	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTAGCACAAGGCTCGG	NA	False	NA	20	True	AATAAA	-24	NA	105072399	105172543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.19	chr11	+	2982	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-219	-20	47	20	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTGTGTGCTTGTGAA	NA	False	NA	13	True	AATAAA	-15	NA	105072399	105167305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.2	chr11	+	3269	22	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	42	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	73.6388502905148	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCCTCCTGGATTCTC	NA	False	NA	22	True	AATAAA	-15	NA	105071613	105172999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105071713_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.20	chr11	+	3599	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	87.0654613369913	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072408	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166732_105169943_105170052_105171910
ES.6573.21	chr11	+	5136	18	NIC	ENSMUSG00000020694.18	novel	3086	20	NA	NA	56	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	92.6294847944605	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAATTCCCAGTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	105072408	105174778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.22	chr11	+	3768	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	92.3922199865854	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105072408	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105073184_105073312_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.23	chr11	+	2783	18	NIC	ENSMUSG00000020694.18	novel	2743	20	NA	NA	59	22	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	94.8776666360297	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGTGTGCTTGTGAAGC	NA	False	NA	15	True	AATAAA	-17	NA	105072411	105167307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.25	chr11	+	4753	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	59	1	intron_retention	FALSE	canonical	3	204	junction_5	60.6110550972345	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105072411	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.26	chr11	+	5316	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-328	-1776	62	-7	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAATTCCCAGTCTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	105072414	105174778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.27	chr11	+	5415	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	62	-1778	62	-4	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTCCCAGTCTCTTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	105072414	105174781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.28	chr11	+	2850	19	NIC	ENSMUSG00000020694.18	novel	2743	20	NA	NA	63	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	88.9716281591157	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAACATACTGTG	NA	False	NA	-7	True	GATAAA	-11	NA	105072415	105167285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.29	chr11	+	6516	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	68	-9	intron_retention	FALSE	canonical	3	204	junction_5	60.6110550972345	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAATTCCCAGTCTC	NA	False	NA	NA	False	AATAAA	-13	NA	105072420	105174776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.3	chr11	+	3145	21	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	85.6630608839072	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105071645	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105071713_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.30	chr11	+	3518	21	NNC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	70	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.9152541320094	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTCCTCCTGGATTC	NA	False	NA	20	True	AATAAA	-13	NA	105072422	105172997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075112_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.31	chr11	+	3239	19	NIC	ENSMUSG00000020694.18	novel	2743	20	NA	NA	72	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	93.2238279559761	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGGCAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	105072424	105167698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.32	chr11	+	5207	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	-12	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	89.777533604829	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAACTAATTCCCAGT	NA	False	NA	NA	False	AATAAA	-10	NA	105072425	105174773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.33	chr11	+	3003	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	73	623	73	-622	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTACTGTGAACTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	105072425	105172380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.34	chr11	+	3648	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.2485203133122	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCTCCTGGATTCT	NA	False	NA	21	True	AATAAA	-14	NA	105072425	105172998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105111984_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.35	chr11	+	3625	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	118.280097251802	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072425	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105097135_105097232_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.36	chr11	+	6601	19	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	-4	intron_retention	FALSE	canonical	3	13	junction_7	92.2100560917542	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCTCCTGGATTCT	NA	False	NA	21	True	AATAAA	-14	NA	105072425	105172998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105170052_105171910
ES.6573.37	chr11	+	3361	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-193	-425	73	11	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTATTTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	105072425	105167710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.38	chr11	+	3386	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	85.6870266080322	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCCTCCTGGATTCTC	NA	False	NA	22	True	AATAAA	-15	NA	105072425	105172999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072602_105072837_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.39	chr11	+	3620	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.6135867863493	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098272_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.4	chr11	+	2464	20	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	121	-463	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	103.637659868101	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGGTAGCACAAGGC	NA	False	NA	16	True	AATAAA	-20	NA	105071692	105172539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105071713_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.40	chr11	+	3580	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	87.6569877419935	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105072425	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.41	chr11	+	5379	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	82	0	intron_retention	FALSE	canonical	3	34	junction_7	86.623105040571	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072434	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943
ES.6573.42	chr11	+	3114	17	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	127.396955909472	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072434	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144146_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.44	chr11	+	3245	19	ISM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-308	5303	82	0	5prime_fragment	FALSE	canonical	3	73	junction_5	77.9279502623979	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGCAAAGATTTATTA	NA	False	NA	NA	False	NA	NA	NA	105072434	105167699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.45	chr11	+	3602	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	83	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	87.6609371915282	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCTCCTGGATTCT	NA	False	NA	21	True	AATAAA	-14	NA	105072435	105172998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075112_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.46	chr11	+	3307	19	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	83	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	118.539374611702	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTCCTCCTGGATTC	NA	False	NA	20	True	AATAAA	-13	NA	105072435	105172997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.47	chr11	+	3054	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	83	-465	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	84.4375508882156	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCTGGTAGCACAAG	NA	False	NA	14	True	AATAAA	-18	NA	105072435	105172537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.49	chr11	+	3616	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	113.441245143789	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072435	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105097135_105097232_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.5	chr11	+	3822	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	-121	-2	-121	2	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGGATTCTCTGATTA	NA	False	NA	28	True	AATAAA	-21	NA	105072231	105173005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.50	chr11	+	3680	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	83	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	103.824987836135	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGGATTCTCTGATT	NA	False	NA	27	True	AATAAA	-20	NA	105072435	105173004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105162944_105163008_105166662_105166775_105169943_105170052_105171910
ES.6573.51	chr11	+	3711	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	103.943812301178	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072436	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105097135_105097232_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.52	chr11	+	4680	21	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	87	0	intron_retention	FALSE	canonical	2	4	junction_19	89.2022841635796	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072439	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166732_105169943_105170052_105171910
ES.6573.53	chr11	+	3918	22	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	88	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	71.3234782435127	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072440	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105073185_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.54	chr11	+	3409	20	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	116.188689786696	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072441	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099737_105100617_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.55	chr11	+	3044	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-291	459	99	-459	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTAGCACAAGGCTCGG	NA	False	NA	20	True	AATAAA	-24	NA	105072451	105172543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.56	chr11	+	3203	22	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	-130	-365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	87.2293871719535	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAATCTCAGTTTCTAA	NA	False	NA	114	True	ATTAAA	-26	NA	105072488	105172637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140304_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.57	chr11	+	3757	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	-130	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	94.4430516237166	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105072488	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105073185_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.58	chr11	+	3188	19	NIC	ENSMUSG00000020694.18	novel	2743	20	NA	NA	-128	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	88.9716281591157	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGGCAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	105072490	105167698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.59	chr11	+	2601	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	-117	259	-117	-259	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTGTTGTATTTTTTTA	NA	False	NA	NA	False	AATATA	-37	NA	105072501	105167026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.6	chr11	+	3709	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	-492	-5	-102	4	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGATTCTCTGATTATA	NA	False	NA	30	True	AATAAA	-23	NA	105072250	105173007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.60	chr11	+	2924	21	NNC	ENSMUSG00000020694.18	novel	2743	20	NA	NA	-115	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	108.783454624313	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACATACTGTGTGC	NA	False	NA	-4	True	GATAAA	-14	NA	105072503	105167288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105162944_105163008_105166662
ES.6573.61	chr11	+	3589	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	103.219746733377	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072524	105173003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105131744_105131807_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.62	chr11	+	3223	19	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	-78	-2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	102.126963465417	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTCCTCCTGGATTCTCT	NA	False	NA	23	True	AATAAA	-16	NA	105072540	105173000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.64	chr11	+	2709	19	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	-40	-459	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	119.352070223632	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTAGCACAAGGCTCGG	NA	False	NA	20	True	AATAAA	-24	NA	105072578	105172543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105169943_105170052_105171910
ES.6573.65	chr11	+	3577	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	104.780693840291	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105072583	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105128431_105128543_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.66	chr11	+	3067	18	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	106.903183570179	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCCTCCTGGATTCTC	NA	False	NA	22	True	AATAAA	-15	NA	105072584	105172999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.67	chr11	+	2784	20	NIC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	-9	-465	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	96.5630418567662	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCTGGTAGCACAAG	NA	False	NA	14	True	AATAAA	-18	NA	105072609	105172537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.68	chr11	+	3470	22	NNC	ENSMUSG00000020694.18	novel	3212	21	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	102.046274683943	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072611	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105073184_105073312_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.7	chr11	+	3581	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	88.4704894300919	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072358	105173002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.70	chr11	+	6265	37	Fusion	ENSMUSG00000020694.18_ENSMUSG00000020695.15	novel	3699	22	NA	NA	-16	1	intron_retention	FALSE	canonical	0	0	junction_10	122.363138462206	570	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGCGTTTGTGCCTCC	NA	False	NA	NA	False	AATAAA	-20	NA	105072791	105241966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105131744_105131807_105132394_105132488_105218797_105218972_105219102_105219268_105219488_105219603_105220050_105220195_105222709_105222899_105223061_105223217_105224449_105224558_105226962_105227079_105227450_105227600_105228453_105228672_105229617_105229761_105231043_105231147_105231363_105231503_105231623_105232081_105232176_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239604_105240393_105240421_105240527
ES.6573.71	chr11	+	4945	20	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	10	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	94.9533199208375	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCCAGTCTCTTGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	105073052	105174782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105073185_105075037_105075121_105098205_105098278_105099677_105099748_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.72	chr11	+	3207	21	NIC	ENSMUSG00000020694.18	novel	703	7	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	83.607700004246	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105073053	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105073185_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.73	chr11	+	3071	20	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	1993	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.553906330741	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105075035	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105075121_105098209_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145794_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.74	chr11	+	151	1	Intergenic	novelGene_5286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGATGCA	NA	False	NA	NA	False	NA	NA	NA	105089703	105089854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105089700_105089900
ES.6573.75	chr11	+	157	1	Intergenic	novelGene_5287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	4426	False	NA	NA	False	NA	NA	NA	105096654	105096811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105096700_105096800
ES.6573.76	chr11	+	2184	16	ISM	ENSMUSG00000020694.18	ENSMUST00000145048.8	2776	18	25442	395	8	19	3prime_fragment	FALSE	canonical	3	34	junction_4	92.9894617685251	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCGTGTGTGCTTGTGA	6021	False	NA	12	True	AATAAA	-14	NA	105098249	105167304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.77	chr11	+	2689	12	ISM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	58960	-18	-6005	18	3prime_fragment	FALSE	canonical	3	261	junction_2	35.65607061779	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCGTGTGTGCTTGTG	5085	False	NA	11	True	AATAAA	-13	NA	105131578	105167303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ES.6573.78	chr11	+	2313	1	Intergenic	novelGene_5293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTTTTGATCTCTT	1311	False	NA	NA	False	AATAAA	-16	NA	105180079	105182392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105180100_105182400
ES.6573.79	chr11	+	6293	30	FSM	ENSMUSG00000020695.15	ENSMUST00000100335.10	5795	30	-498	0	-495	0	multi-exon	FALSE	canonical	0	0	junction_5	1.56507665074624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCAGCGTTTGTGCCTC	1002	False	NA	NA	False	AATAAA	-19	NA	105182973	105241965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105183728_105216327_105216730_105218797_105218972_105219102_105219268_105219488_105219603_105220050_105220195_105222709_105222899_105223061_105223217_105224449_105224558_105226962_105227079_105227450_105227600_105228453_105228672_105229617_105229761_105231043_105231147_105231363_105231503_105231623_105231660_105231919_105232081_105232176_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239604_105240393_105240421_105240524
ES.6573.8	chr11	+	4459	21	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	7	-463	intron_retention	FALSE	canonical	2	6	junction_7	86.694232795498	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGGTAGCACAAGGC	NA	False	NA	16	True	AATAAA	-20	NA	105072359	105172539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105101467_105112011_105112180_105131186_105131807_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6573.80	chr11	+	3614	15	NNC	ENSMUSG00000020695.15	novel	5795	30	NA	NA	-295	-1	intron_retention	FALSE	canonical	0	0	junction_3	1.88982236504614	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCAGCGTTTGTGCCT	NA	False	NA	NA	False	AATAAA	-18	NA	105231362	105241964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105231503_105231623_105232081_105232176_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237550_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239604_105240393_105240421_105240524
ES.6573.9	chr11	+	3372	19	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	25	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	94.1547190060653	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCCTGGATTCTCTG	NA	False	NA	24	True	AATAAA	-17	NA	105072377	105173001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ES.6574.1	chr11	-	3057	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	46	605	46	-605	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATTTTTCTCAGAAAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	105072213	105069156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105069200_105072200
ES.6574.2	chr11	-	2285	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	151	1272	151	-1272	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTATTTTGTGTGAGTT	NA	False	NA	NA	False	TATAAA	-23	NA	105072108	105069823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105069800_105072100
ES.6574.3	chr11	-	1505	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	88	2115	88	-2115	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATATGGCCTGCAAC	NA	False	NA	NA	False	AATAAA	-5	NA	105072171	105070666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105070700_105072200
ES.6575.1	chr11	-	174	1	Intergenic	novelGene_5284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	105077326	105077152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105077200_105077300
ES.6576.1	chr11	-	1283	1	Intergenic	novelGene_5285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105082916	105081633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105081600_105082900
ES.6577.1	chr11	-	170	2	Antisense	novelGene_ENSMUSG00000020694.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTT	NA	False	NA	NA	False	NA	NA	NA	105107017	105098736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_105098750_105106860
ES.6577.2	chr11	-	177	1	Intergenic	novelGene_5288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAATAT	NA	False	NA	NA	False	NA	NA	NA	105107026	105106849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105106800_105107000
ES.6578.1	chr11	-	218	1	Intergenic	novelGene_5289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTACTATAG	NA	False	NA	NA	False	NA	NA	NA	105111292	105111074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105111100_105111300
ES.6579.1	chr11	-	175	1	Intergenic	novelGene_5290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8900	False	NA	NA	False	NA	NA	NA	105117420	105117245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105117200_105117400
ES.658.1	chr1	-	202	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATGAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65143326	65143124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_65143100_65143300
ES.6580.1	chr11	-	5533	1	Intergenic	novelGene_5291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAAAAGGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	105129156	105123623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105123600_105129200
ES.6581.1	chr11	-	158	1	Intergenic	novelGene_5292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	105166369	105166211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105166200_105166400
ES.6582.1	chr11	-	135	1	Intergenic	novelGene_5294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAAAAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	105271122	105270987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105271000_105271100
ES.6583.1	chr11	+	6984	27	NIC	ENSMUSG00000053580.17	novel	11855	26	NA	NA	-304	-21	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	4.92623096081476	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTTTTCTTCTAGA	NA	False	NA	NA	False	AAAAAG	-10	NA	105480507	105814920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.10	chr11	+	157	1	Intergenic	novelGene_5299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4116	False	NA	NA	False	NA	NA	NA	105788934	105789091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105788900_105789100
ES.6583.11	chr11	+	4065	10	ISM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	309607	4765	-124	-193	3prime_fragment	FALSE	canonical	1	3	junction_6	3.25841739969226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGGAGAACTGTTGGTA	5605	False	NA	NA	False	AATAAA	-27	NA	105790423	105815365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.12	chr11	+	5846	10	ISM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	309705	2886	-26	1686	3prime_fragment	FALSE	canonical	1	3	junction_6	3.25841739969226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTCTTCATTAGAAAT	5703	False	NA	NA	False	GATAAA	-21	NA	105790521	105817244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.13	chr11	+	6555	1	ISM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	332759	0	20767	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCTGCTGCTTTTC	NA	False	NA	NA	False	TATAAA	-20	NA	105813575	105820130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105813600_105820100
ES.6583.2	chr11	+	7226	26	FSM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	-275	4904	-270	285	multi-exon	FALSE	canonical	1	3	junction_22	4.4728514395182	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	105480541	105815226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.3	chr11	+	2365	12	NIC	ENSMUSG00000053580.17	novel	11855	26	NA	NA	-260	-52000	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	5.8479352858456	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTTGGCTCAAACTAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	105480551	105754864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604391_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742
ES.6583.4	chr11	+	7461	26	NIC	ENSMUSG00000053580.17	novel	11855	26	NA	NA	-258	-196	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	4.58589140734928	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCAGGAGAACTGTTG	NA	False	NA	NA	False	AATAAA	-24	NA	105480553	105815362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604391_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.5	chr11	+	6876	26	FSM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	-231	5210	-226	-21	multi-exon	FALSE	canonical	1	3	junction_22	4.4728514395182	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTTTTCTTCTAGA	NA	False	NA	NA	False	AAAAAG	-10	NA	105480585	105814920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ES.6583.6	chr11	+	3131	13	ISM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	-222	61263	-217	-47997	5prime_fragment	FALSE	canonical	2	4	junction_4	5.53022000767902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATGCCTCTCAACCTA	NA	False	NA	NA	False	TATAAA	-12	NA	105480594	105758867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992
ES.6583.7	chr11	+	2536	8	NNC	ENSMUSG00000053580.17	novel	11855	26	NA	NA	-217	24714	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	6.39195923462774	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAGGAGGTCATAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	105480594	105692437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105691216
ES.6583.8	chr11	+	5303	10	ISM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	-218	85102	-213	67305	5prime_fragment	FALSE	canonical	2	4	junction_4	5.3495124965381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105480598	105735028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444
ES.6583.9	chr11	+	534	1	Intergenic	novelGene_5295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105481118	105481652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_105481100_105481700
ES.6584.1	chr11	-	179	1	Intergenic	novelGene_5296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACTAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	105490391	105490212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105490200_105490400
ES.6585.1	chr11	-	2235	1	Intergenic	novelGene_5297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	105526885	105524650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105524600_105526900
ES.6586.1	chr11	-	203	1	Intergenic	novelGene_5298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCAATGGATGACTGT	NA	False	NA	NA	False	NA	NA	NA	105738902	105738699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105738700_105738900
ES.6587.1	chr11	-	4760	3	Antisense	novelGene_ENSMUSG00000053580.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAGAAGGAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	105814126	105804780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_105807885_105810774_105810873_105812568
ES.6587.2	chr11	-	2803	4	Antisense	novelGene_ENSMUSG00000053580.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-34	NA	105814126	105804807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_105805808_105807737_105807885_105810774_105810873_105812568
ES.6588.1	chr11	+	1884	1	FSM	ENSMUSG00000103469.2	ENSMUST00000195385.2	1550	1	-333	-1	-333	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGGCGCTGAGCCATT	NA	False	NA	NA	False	AATAAA	-17	NA	105834196	105836080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105834200_105836100
ES.6589.1	chr11	-	2868	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	-119	-8	-44	8	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCATTTGCTGAG	NA	False	NA	4	True	AATAAA	-23	NA	105835357	105824519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ES.6589.10	chr11	-	6460	6	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	18	-1	intron_retention	FALSE	canonical	3	69	junction_5	44.777673007873	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGCCTTCTGTCTTCA	NA	False	NA	-5	True	AATAAA	-14	NA	105834947	105824528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925
ES.6589.11	chr11	-	2804	7	NIC	ENSMUSG00000019590.17	novel	1130	6	NA	NA	-15	-2	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	76.9446048935351	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105834980	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
ES.6589.13	chr11	-	2994	2	NIC	ENSMUSG00000019590.17	novel	967	4	NA	NA	-15	-2	intron_retention	FALSE	canonical	1	1	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105834980	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105827480_105834936
ES.6589.14	chr11	-	2897	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-35	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	71.2524853367703	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105835000	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831322_105834936
ES.6589.15	chr11	-	2804	7	NNC	ENSMUSG00000019590.17	novel	1130	6	NA	NA	-534	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	81.8385945355586	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105835847	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831225_105835823
ES.6589.16	chr11	-	2791	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.5580572371522	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105834949	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834874
ES.6589.17	chr11	-	2529	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	71.5580572371522	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTTGCCTTCTGTCTTC	NA	False	NA	-6	True	AATAAA	-13	NA	105834963	105824529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105830991_105834936
ES.6589.19	chr11	-	2322	5	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.2606549932532	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGCTTGCCTTCTGTCTT	NA	False	NA	-7	True	AATAAA	-12	NA	105834982	105824530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105827007_105827112_105827380_105827478_105828454_105828667_105834936
ES.6589.2	chr11	-	2784	7	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-575	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	70.9475549653091	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCCTTCTGTCTTCATT	NA	False	NA	-3	True	AATAAA	-16	NA	105835888	105824526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105835823
ES.6589.20	chr11	-	2683	8	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.9838865839868	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCGCTTGCCTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	105834965	105824531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105825885_105825944_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
ES.6589.22	chr11	-	3542	1	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	551	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCGCTTGCCTTCTGTCT	NA	False	NA	-8	True	AATAAA	-11	NA	105828073	105824531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105824500_105828100
ES.6589.23	chr11	-	4089	1	NIC	ENSMUSG00000019590.17	novel	771	5	NA	NA	899	-2597	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGCTGTCAGACAGA	NA	False	NA	NA	False	GGGGCT	-37	NA	105834066	105829977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105830000_105834100
ES.6589.3	chr11	-	2800	5	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-62	1	intron_retention	FALSE	canonical	3	87	junction_4	39.7680776502963	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCCTTCTGTCTTCATT	NA	False	NA	-3	True	AATAAA	-16	NA	105835027	105824526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826736_105827007_105827480_105828454_105828667_105834936
ES.6589.4	chr11	-	3455	5	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	87	junction_4	41.5955225955871	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834977	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105828667_105834936
ES.6589.5	chr11	-	2816	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835034	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
ES.6589.6	chr11	-	3196	3	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-542	0	intron_retention	FALSE	canonical	3	12	junction_2	80.5	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835855	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105827480_105828454_105828667_105835823
ES.6589.7	chr11	-	2528	6	NNC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-555	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	85.092890419823	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835868	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105835823
ES.6589.8	chr11	-	4180	4	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	-1941	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	83.8424448328861	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105830565	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_105826394_105827007_105827112_105827380_105827480_105828454
ES.6589.9	chr11	-	2645	6	FSM	ENSMUSG00000019590.17	ENSMUST00000184086.8	1130	6	-133	-1382	-133	0	multi-exon	FALSE	canonical	3	6	junction_2	71.4898594207598	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835098	105824527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ES.659.1	chr1	-	880	4	NNC	ENSMUSG00000044816.11	novel	1156	8	NA	NA	12848	2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	13.4412301024373	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATGTCAGCTCTTTC	9967	False	NA	NA	False	AATAAA	-13	NA	65149425	65144441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65144910_65148620_65148736_65149035_65149124_65149216
ES.659.3	chr1	-	1886	4	NNC	ENSMUSG00000044816.11	novel	594	7	NA	NA	12897	-9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.28653526310404	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGTATGCTTTTTGT	9672	False	NA	NA	False	AATAAA	-21	NA	65149376	65146480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65147965_65148620_65148736_65148992_65149124_65149220
ES.6590.1	chr11	+	4937	25	FSM	ENSMUSG00000020681.15	ENSMUST00000001963.14	4906	25	-61	30	-61	-30	multi-exon	FALSE	canonical	0	0	junction_3	2.26691175145591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAATATAAGCACT	NA	False	NA	NA	False	AATAAA	-17	NA	105858709	105880760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105859072_105859732_105859901_105860526_105860621_105861378_105861523_105862117_105862310_105862842_105862941_105863186_105863360_105863686_105863911_105864217_105864363_105864604_105864704_105864929_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254_105879443_105879627
ES.6590.2	chr11	+	4400	24	ISM	ENSMUSG00000020681.15	ENSMUST00000001963.14	4906	25	-14	705	-14	-1	intron_retention	FALSE	canonical	0	0	junction_3	2.23564524037956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGAGTCTGTGTCCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	105858756	105880085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105859072_105859732_105859901_105860526_105860621_105861378_105861523_105862117_105862310_105862842_105862941_105863186_105863360_105863686_105863911_105864217_105864363_105864604_105864704_105864929_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254
ES.6590.3	chr11	+	5018	25	NNC	ENSMUSG00000020681.15	novel	4906	25	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.15984503044907	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGTTCAGACTTTTTCT	NA	False	NA	NA	False	AATATA	-19	NA	105858773	105880792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105859072_105859732_105859901_105860526_105860621_105861378_105861523_105862117_105862310_105862842_105862941_105863186_105863360_105863686_105863911_105864217_105864363_105864604_105864704_105864816_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254_105879443_105879627
ES.6590.4	chr11	+	4196	25	FSM	ENSMUSG00000020681.15	ENSMUST00000001963.14	4906	25	8	702	8	2	multi-exon	FALSE	canonical	0	0	junction_3	2.26691175145591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTCTGTGTCCCTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	105858778	105880088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105859072_105859732_105859901_105860526_105860621_105861378_105861523_105862117_105862310_105862842_105862941_105863186_105863360_105863686_105863911_105864217_105864363_105864604_105864704_105864929_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254_105879443_105879627
ES.6590.5	chr11	+	3215	19	NNC	ENSMUSG00000020681.15	novel	695	6	NA	NA	1211	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.14015114269536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGTCTGTGTCCCTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	105863359	105880087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105863542_105863686_105863911_105864217_105864363_105864604_105864704_105864929_105865053_105865492_105865705_105866361_105866499_105867370_105867530_105867777_105867866_105869995_105870140_105870306_105870499_105872323_105872422_105872593_105872767_105875870_105876095_105876398_105876544_105876815_105876915_105878841_105878965_105879254_105879443_105879627
ES.6590.6	chr11	+	1222	4	ISM	ENSMUSG00000020681.15	ENSMUST00000001964.8	2418	14	10341	-6	8944	-1	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGAGTCTGTGTCCCT	NA	False	NA	NA	False	ATTAAA	-12	NA	105876374	105880085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105876544_105876815_105876915_105878841_105878965_105879254
ES.6591.1	chr11	+	2581	8	NNC	ENSMUSG00000001901.16	novel	3368	13	NA	NA	5047	528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.58725289661069	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACACGGTTTCAACCC	7667	False	NA	NA	False	AATAAA	-27	NA	105909645	105925903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105909862_105910947_105911148_105911316_105911570_105914550_105914745_105916619_105916705_105917541_105917699_105918382_105918564_105924608
ES.6591.2	chr11	+	3847	5	NNC	ENSMUSG00000001901.16	novel	3368	13	NA	NA	6373	49	intron_retention	FALSE	canonical	0	0	junction_4	1.92028643696715	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGCTAGGTGTGTA	8993	False	NA	NA	False	AATAAA	-14	NA	105910971	105925424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105911570_105914550_105916705_105917541_105917699_105918382_105918564_105924667
ES.6591.3	chr11	+	2847	7	ISM	ENSMUSG00000001901.16	ENSMUST00000001965.14	3368	13	11984	-1045	6384	1045	3prime_fragment	FALSE	canonical	1	2	junction_2	2.11476292340825	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTAGGTATCCAGTTAA	9004	False	NA	NA	False	AATAAA	-18	NA	105910982	105926420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105911148_105911316_105911570_105914550_105914745_105916619_105916705_105917541_105917699_105918382_105918564_105924608
ES.6591.4	chr11	+	2110	6	ISM	ENSMUSG00000001901.16	ENSMUST00000145539.2	2959	13	12441	-1005	6871	520	3prime_fragment	FALSE	canonical	1	2	junction_1	1.62480768092719	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAGGAGAACACGGT	9491	False	NA	NA	False	AATAAA	-19	NA	105911469	105925895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105911570_105914550_105914745_105916513_105916705_105917541_105917699_105918382_105918564_105924608
ES.6591.5	chr11	+	1525	6	ISM	ENSMUSG00000001901.16	ENSMUST00000001965.14	3368	13	12480	-50	6880	50	3prime_fragment	FALSE	canonical	1	2	junction_1	1.72046505340853	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGGCTAGGTGTGTAA	9500	False	NA	NA	False	AATAAA	-15	NA	105911478	105925425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105911570_105914550_105914745_105916619_105916705_105917541_105917699_105918382_105918564_105924608
ES.6592.1	chr11	+	5582	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	-20	188	-20	-188	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGCGGTTTCTCCACTG	4725	False	NA	NA	False	AATAAA	-23	NA	105927677	105949962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ES.6592.2	chr11	+	5768	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	-2	-16	-2	16	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTCTTCTCAGTTTGT	4743	False	NA	31	True	AATAAA	-40	NA	105927695	105950166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ES.6592.3	chr11	+	1582	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	13	4155	13	-4155	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTGTCCATTTGCC	4758	False	NA	50	True	CATAAA	-17	NA	105927710	105945995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ES.6592.4	chr11	+	6559	6	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	25	0	-3	0	intron_retention	FALSE	canonical	3	189	junction_4	14.4775688566831	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	4770	False	NA	15	True	AATAAA	-24	NA	105927722	105950150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556
ES.6592.5	chr11	+	5801	8	NNC	ENSMUSG00000049354.9	novel	5750	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.4742010473479	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	4778	False	NA	15	True	AATAAA	-24	NA	105927730	105950150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105928088_105934299_105934384_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ES.6592.6	chr11	+	4931	5	NNC	ENSMUSG00000049354.9	novel	5750	7	NA	NA	11324	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	84.9028856988972	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	NA	False	NA	15	True	AATAAA	-24	NA	105939049	105950150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105939088_105942582_105942793_105944556_105944675_105945508_105949952_105950028
ES.6592.7	chr11	+	4755	2	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	16857	7	16829	-7	3prime_fragment	FALSE	canonical	3	184	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAATTTTTCTTGTGAT	1202	False	NA	8	True	AATAAA	-17	NA	105944554	105950143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105944675_105945508
ES.6593.1	chr11	-	176	1	Intergenic	novelGene_5300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATCCTATTTAATAAAT	6104	False	NA	NA	False	NA	NA	NA	105938394	105938218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105938200_105938400
ES.6594.1	chr11	+	1402	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	-37	18	-37	-18	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTGTTGCTGGTATG	837	False	NA	8	True	NA	NA	NA	105956849	105964420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ES.6594.10	chr11	+	2939	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-57	568	-57	-568	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGTCACTCTTATGCT	135	False	NA	NA	False	NA	NA	NA	105975381	106045704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.11	chr11	+	3506	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-56	0	-56	0	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	136	False	NA	NA	False	NA	NA	NA	105975382	106046272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.12	chr11	+	3669	15	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-45	303	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	13.5013226865265	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTTTGCAGATATGTG	147	False	NA	NA	False	NA	NA	NA	105975393	106046575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106042440_106042574_106043042_106043221_106044791
ES.6594.13	chr11	+	4757	14	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-44	317	intron_retention	FALSE	canonical	3	32	junction_6	10.1176511061276	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTTGCACGGTGCC	148	False	NA	NA	False	NA	NA	NA	105975394	106046589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106043221_106044791
ES.6594.14	chr11	+	4640	16	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-39	1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.4766478624485	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGAAGGGTCCTGTGAC	153	False	NA	12	True	AATAAA	-13	NA	105975399	106047474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005059_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.15	chr11	+	4694	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-37	-1207	-37	1207	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTCCTGTGACCATGC	155	False	NA	17	True	AATAAA	-18	NA	105975401	106047479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.16	chr11	+	3297	15	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	14.7435561849776	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	167	False	NA	NA	False	NA	NA	NA	105975413	106046272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106044791
ES.6594.17	chr11	+	3425	13	ISM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-25	2567	-25	501	intron_retention	FALSE	canonical	3	32	junction_6	10.4721853816033	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTTCTAGAGCTAGG	167	False	NA	NA	False	NA	NA	NA	105975413	106043705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834
ES.6594.19	chr11	+	4600	17	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-15	1204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.0440156294416	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAGGGTCCTGTGACCA	177	False	NA	14	True	AATAAA	-15	NA	105975423	106047476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975598_105975666_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.2	chr11	+	2572	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	24	-1213	24	1213	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGGCTTACCAGTGAT	898	False	NA	NA	False	NA	NA	NA	105956910	105965651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ES.6594.20	chr11	+	4310	7	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-15	-24761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	16.6574974777793	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGAACAATACTGGAGA	177	False	NA	NA	False	NA	NA	NA	105975423	106018443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106017730_106017964
ES.6594.21	chr11	+	2767	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-13	696	-13	610	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAATGTTACACTGCCT	179	False	NA	NA	False	NA	NA	NA	105975425	106045576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.22	chr11	+	3640	17	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-6	259	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.0440156294416	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGGTGATGGACTCCTG	186	False	NA	NA	False	NA	NA	NA	105975432	106046531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975592_105975666_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.23	chr11	+	3655	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-5	-200	-5	200	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTATATCTCAGATCCA	187	False	NA	NA	False	NA	NA	NA	105975433	106046472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.24	chr11	+	3267	14	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	12419	300	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.8300031720442	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGTTTTGCAGATAT	2067	False	NA	NA	False	NA	NA	NA	105987857	106046572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.25	chr11	+	2953	13	ISM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	29570	14	29570	-14	3prime_fragment	FALSE	canonical	3	32	junction_3	10.20994885176	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	106005008	106046258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.26	chr11	+	2029	13	ISM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	29638	870	29638	436	3prime_fragment	FALSE	canonical	3	32	junction_3	10.20994885176	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGAGTGTTACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	106005076	106045402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.27	chr11	+	1674	1	Intergenic	novelGene_5305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAAGAAAGAAGGA	7637	False	NA	NA	False	NA	NA	NA	106027778	106029452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106027800_106029500
ES.6594.28	chr11	+	160	1	Intergenic	novelGene_5306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	106031914	106032074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106031900_106032100
ES.6594.29	chr11	+	2640	2	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-1593	470	intron_retention	FALSE	canonical	3	63	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAGAAAAGAAAA	3478	False	NA	NA	False	NA	NA	NA	106040444	106043674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106041245_106041834
ES.6594.3	chr11	+	4145	18	Fusion	ENSMUSG00000001983.8_ENSMUSG00000020700.12	novel	1383	5	NA	NA	25	300	multi-exon	FALSE	canonical	0	0	junction_4	17.3434670049234	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGTTTTGCAGATAT	899	False	NA	NA	False	NA	NA	NA	105956911	106046572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106043042_106043221_106044791
ES.6594.4	chr11	+	2987	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	27	-1631	27	1631	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTAGCTGTGCTGACTGCT	901	False	NA	NA	False	AAAAAG	-4	NA	105956913	105966069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ES.6594.5	chr11	+	3503	16	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	14.4876959290749	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	127	False	NA	NA	False	NA	NA	NA	105975373	106046272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.6	chr11	+	3399	15	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-63	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.8797904308262	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	129	False	NA	NA	False	NA	NA	NA	105975375	106046272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.7	chr11	+	3823	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-61	-312	-61	312	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATATGTGTGTTGCACG	131	False	NA	NA	False	NA	NA	NA	105975377	106046584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.8	chr11	+	3782	16	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	-61	316	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	14.4766478624485	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTGTTGCACGGTGC	131	False	NA	NA	False	NA	NA	NA	105975377	106046588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040455_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ES.6594.9	chr11	+	7820	12	ISM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	-57	-1206	-57	1206	intron_retention	FALSE	canonical	3	32	junction_6	8.94242372898759	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGGTCCTGTGACCATG	135	False	NA	16	True	AATAAA	-17	NA	105975381	106047478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095
ES.6595.1	chr11	-	173	1	Intergenic	novelGene_5301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTTAAAAAAAA	5620	False	NA	NA	False	NA	NA	NA	105969465	105969292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105969300_105969500
ES.6596.1	chr11	-	175	1	Intergenic	novelGene_5302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	105996641	105996466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_105996500_105996600
ES.6597.1	chr11	-	176	1	Intergenic	novelGene_5303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATCAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	106000649	106000473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106000500_106000600
ES.6598.1	chr11	-	213	1	Intergenic	novelGene_5304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGAATATGCATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	106007148	106006935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106006900_106007100
ES.6599.1	chr11	-	349	1	Intergenic	novelGene_5307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	106037693	106037344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106037300_106037700
ES.6599.2	chr11	-	172	1	Intergenic	novelGene_5308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAACTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	106037692	106037520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106037500_106037700
ES.66.1	chr1	+	196	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAGGAATA	3969	False	NA	NA	False	NA	NA	NA	9810979	9811175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9811000_9811200
ES.660.1	chr1	-	201	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7545	False	NA	NA	False	NA	NA	NA	65153547	65153346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_65153300_65153500
ES.6600.1	chr11	-	2993	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-43	0	-43	0	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCATGTCCACAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	106051011	106047081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ES.6600.2	chr11	-	1533	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-42	1459	-42	599	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGGCTTCGGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	106051010	106048540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ES.6600.3	chr11	-	1499	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-42	593	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCATGCCTGGCTTCGG	NA	False	NA	NA	False	NA	NA	NA	106051010	106048546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
ES.6600.4	chr11	-	1222	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	-46	1774	-46	284	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCCTGATGGGGAT	NA	False	NA	-3	True	TTTAAA	-26	NA	106051014	106048855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ES.6600.5	chr11	-	1174	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-36	274	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCTCTTGTGTGGCC	NA	False	NA	-13	True	TTTAAA	-16	NA	106051004	106048865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
ES.6600.6	chr11	-	1201	5	NNC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-42	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	118.098475858074	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051010	106048866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106049654_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ES.6600.7	chr11	-	1397	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	177	273	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	112.144995430024	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051509	106048866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106051185
ES.6600.8	chr11	-	1349	4	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	-43	273	intron_retention	FALSE	canonical	3	236	junction_1	28.5773803324704	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051011	106048866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106049660_106049760_106049901_106049987_106050269_106050876
ES.6600.9	chr11	-	1328	5	FSM	ENSMUSG00000040699.14	ENSMUST00000106875.2	936	5	218	-610	218	273	multi-exon	FALSE	canonical	0	0	junction_4	117.232674626147	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106051468	106048866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106051185
ES.6601.1	chr11	+	1990	1	Intergenic	novelGene_5309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAACTATGAAGCATGT	NA	False	NA	NA	False	AATAAA	-38	NA	106079798	106081788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106079800_106081800
ES.6602.1	chr11	+	175	1	Intergenic	novelGene_5311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATACCCCTACA	4624	False	NA	NA	False	NA	NA	NA	106101625	106101800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106101600_106101800
ES.6603.1	chr11	+	3806	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-523	-124	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGGGCTGTCGTTTC	NA	False	NA	93	True	AGTAAA	-15	NA	106107228	106139841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.10	chr11	+	4459	20	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	-470	-202	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	173.907384527949	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATTTTTGTGAAGG	NA	False	NA	15	True	TATAAA	-23	NA	106107281	106139763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106112172_106112283_106112787_106112858_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.11	chr11	+	2866	1	Genic_Genomic	ENSMUSG00000020705.7	novel	NA	NA	NA	NA	-469	-19502	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGGTATTTGACAGCT	NA	False	NA	NA	False	NA	NA	NA	106107282	106110148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_106107300_106110100
ES.6603.12	chr11	+	4357	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	-468	122	-468	-122	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCTGTCGTTTCTA	NA	False	NA	-94	True	AGTAAA	-17	NA	106107283	106139843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.13	chr11	+	3787	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	-24	-197	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	123.231517561114	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGTGAAGGTTTCT	NA	False	NA	20	True	TATAAA	-28	NA	106107727	106139768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133751_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.14	chr11	+	3992	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	125.961784259155	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107733	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.15	chr11	+	3791	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	-9	-227	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	118.85704244929	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATATACAAACT	NA	False	NA	-10	True	AAAAAG	-44	NA	106107742	106139738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115755_106119584_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.16	chr11	+	6771	14	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	1	1	intron_retention	FALSE	canonical	1	2	junction_4	138.630452523477	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107752	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.17	chr11	+	5294	17	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-227	intron_retention	FALSE	canonical	2	9	junction_5	124.988858878502	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATATACAAACT	NA	False	NA	-10	True	AAAAAG	-44	NA	106107773	106139738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123604_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.18	chr11	+	5093	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	0	intron_retention	FALSE	canonical	0	0	junction_17	157.669752536915	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107773	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123604_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106139060_106139487
ES.6603.19	chr11	+	3568	16	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-124	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	123.712821575705	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGAGGGCTGTCGTTTC	NA	False	NA	93	True	AGTAAA	-15	NA	106107773	106139841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.2	chr11	+	3911	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-503	1	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107248	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.20	chr11	+	3772	17	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-195	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	184.824071754737	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTGAAGGTTTCTTT	NA	False	NA	22	True	TATAAA	-30	NA	106107773	106139770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123604_106123737_106125677_106125798_106126432_106126610_106127820_106127938_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.21	chr11	+	3775	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	119.819772065289	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107773	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106138874_106139087
ES.6603.22	chr11	+	2609	17	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	22	1994	22	-1994	5prime_fragment	FALSE	canonical	2	294	junction_3	63.5698434794361	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAGATATTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	106107773	106137971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601
ES.6603.23	chr11	+	5495	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	1	intron_retention	FALSE	canonical	2	294	junction_3	63.6763974620895	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107773	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.24	chr11	+	4099	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	154.289250563693	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107773	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106112172_106112283_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.25	chr11	+	6935	16	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-206	intron_retention	FALSE	canonical	2	294	junction_3	64.9193003316853	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTGTGATTTTTGTG	NA	False	NA	11	True	TATAAA	-19	NA	106107773	106139759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106125798_106126432_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.29	chr11	+	3752	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-200	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	125.961784259155	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTTTTGTGAAGGTT	NA	False	NA	17	True	TATAAA	-25	NA	106107773	106139765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.3	chr11	+	4066	20	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-481	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.100278227463	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107270	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106112172_106112283_106112787_106112858_106114906_106115145_106115609_106115765_106119594_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.32	chr11	+	3762	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	22	227	22	-227	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATATACAAACT	NA	False	NA	-10	True	AAAAAG	-44	NA	106107773	106139738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.33	chr11	+	3724	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	22	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	119.819772065289	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGAAGGTTTCTTTA	NA	False	NA	23	True	TATAAA	-31	NA	106107773	106139771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106139075_106139145
ES.6603.36	chr11	+	4502	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	33	-4	intron_retention	FALSE	canonical	2	294	junction_3	64.5939238628526	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATCTCTTTTATCTTTT	NA	False	NA	24	True	ATTAAA	-11	NA	106107784	106139961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.37	chr11	+	4813	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	33	-212	intron_retention	FALSE	canonical	2	294	junction_3	64.604052456096	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAATTTTGTGATT	NA	False	NA	5	True	TATAAA	-13	NA	106107784	106139753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.38	chr11	+	5280	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	34	-202	intron_retention	FALSE	canonical	2	294	junction_3	63.6763974620895	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATTTTTGTGAAGG	NA	False	NA	15	True	TATAAA	-23	NA	106107785	106139763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.4	chr11	+	5391	17	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-479	0	intron_retention	FALSE	canonical	2	54	junction_1	115.848972265618	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107272	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.40	chr11	+	3713	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	35	-122	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	119.819772065289	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCTGTCGTTTCTA	NA	False	NA	-94	True	AGTAAA	-17	NA	106107786	106139843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106138628_106138768
ES.6603.41	chr11	+	4041	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	35	60111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	119.819772065289	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAACAAAGC	NA	False	NA	NA	False	NA	NA	NA	106107786	106200076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106139966_106200011
ES.6603.43	chr11	+	6828	15	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	35	1	intron_retention	FALSE	canonical	2	294	junction_3	67.359074354976	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107786	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.45	chr11	+	3879	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	35	-207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	154.289250563693	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTTTGTGATTTTTGT	NA	False	NA	10	True	TATAAA	-18	NA	106107786	106139758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106112172_106112283_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.46	chr11	+	3760	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	39	-206	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.85704244929	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTGTGATTTTTGTG	NA	False	NA	11	True	TATAAA	-19	NA	106107790	106139759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119594_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.47	chr11	+	3753	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	49	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.800608367831	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTGTGAAGGTTT	NA	False	NA	18	True	TATAAA	-26	NA	106107800	106139766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114912_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121961_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.48	chr11	+	4051	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	50	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	122.859669012643	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTTTATCTTTTTAT	NA	False	NA	27	True	ATTAAA	-14	NA	106107801	106139964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125586_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.49	chr11	+	5902	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	51	1	intron_retention	FALSE	canonical	2	294	junction_3	64.543105751118	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107802	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.5	chr11	+	3837	20	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-471	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	174.137574167214	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTGATTTTTGTGAA	NA	False	NA	13	True	TATAAA	-21	NA	106107280	106139761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106112172_106112266_106112787_106112858_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.53	chr11	+	3526	19	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	119.819772065289	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTTTATCTTTTTAT	NA	False	NA	27	True	ATTAAA	-14	NA	106107807	106139964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106139060_106139487
ES.6603.54	chr11	+	3944	17	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	162.082239445752	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107808	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123604_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.55	chr11	+	6222	16	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	58	0	intron_retention	FALSE	non_canonical	0	0	junction_3	125.435171392326	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107809	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115609_106115760_106119588_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.57	chr11	+	4128	20	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	59	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	173.907384527949	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATCTCTTTTATCTTTT	NA	False	NA	24	True	ATTAAA	-11	NA	106107810	106139961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106112172_106112283_106112787_106112858_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.58	chr11	+	3729	18	NNC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	59	-212	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	123.03826731921	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAATTTTGTGATT	NA	False	NA	5	True	TATAAA	-13	NA	106107810	106139753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107983_106114906_106115145_106115620_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.6	chr11	+	3456	19	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-471	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	172.000968989519	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107280	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130014_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317_106139062_106139487
ES.6603.61	chr11	+	6525	16	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	61	-1	intron_retention	FALSE	canonical	2	294	junction_3	59.8915315846536	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTTTTATCTTTTTAT	NA	False	NA	27	True	ATTAAA	-14	NA	106107812	106139964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.62	chr11	+	4959	16	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	62	0	intron_retention	FALSE	canonical	1	2	junction_4	130.05701313911	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107813	106139965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.64	chr11	+	3660	17	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	7153	122	7153	-122	3prime_fragment	FALSE	canonical	2	294	junction_2	64.3180269733922	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCTGTCGTTTCTA	1164	False	NA	-94	True	AGTAAA	-17	NA	106114904	106139843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.65	chr11	+	4096	13	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	-6875	-207	intron_retention	FALSE	canonical	3	405	junction_1	44.4118196229587	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATTTTGTGATTTTTGT	7206	False	NA	10	True	TATAAA	-18	NA	106120946	106139758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.66	chr11	+	3021	12	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	15878	123	-4192	-123	3prime_fragment	FALSE	canonical	3	436	junction_1	40.2140964553353	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGGGCTGTCGTTTCT	9889	False	NA	94	True	AGTAAA	-16	NA	106123629	106139842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.67	chr11	+	4751	11	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	15985	227	-4085	-227	3prime_fragment	FALSE	canonical	3	440	junction_4	38.9075828084963	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATATACAAACT	9996	False	NA	-10	True	AAAAAG	-44	NA	106123736	106139738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.68	chr11	+	174	1	Intergenic	novelGene_5312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	106124876	106125050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106124900_106125000
ES.6603.69	chr11	+	7926	3	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	1514	-206	intron_retention	FALSE	canonical	3	441	junction_1	0	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTGTGATTTTTGTG	NA	False	NA	11	True	TATAAA	-19	NA	106129335	106139759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106130926_106132376_106132654_106133700
ES.6603.7	chr11	+	4483	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	-471	-1	-471	1	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTATCTTTTTATTC	NA	False	NA	29	True	ATTAAA	-16	NA	106107280	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.70	chr11	+	3617	2	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	27062	197	6992	-197	intron_retention	FALSE	canonical	3	493	junction_1	0	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTGTGAAGGTTTCT	NA	False	NA	20	True	TATAAA	-28	NA	106134813	106139768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106136264_106137601
ES.6603.71	chr11	+	3645	2	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	-237	2926	-237	-2926	5prime_fragment	FALSE	canonical	3	2464	junction_1	0	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGCCAAGTGCTCGCT	4299	False	NA	NA	False	NA	NA	NA	106146742	106151020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106147041_106147673
ES.6603.72	chr11	+	1474	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	-67	-91	-67	91	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTTTGCCAAGCCTTA	4469	False	NA	106	True	AATAAA	-23	NA	106146912	106154037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ES.6603.73	chr11	+	1235	10	NIC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	825.672580310466	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4527	False	NA	12	True	AATAAA	-16	NA	106146970	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153834
ES.6603.74	chr11	+	1398	12	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	-1	46130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	755.036302558902	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAACAAAGC	4535	False	NA	NA	False	NA	NA	NA	106146978	106200076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834_106153955_106200003
ES.6603.75	chr11	+	1290	11	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	788.701616582596	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4536	False	NA	12	True	AATAAA	-16	NA	106146979	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153495_106153622_106153710_106153834
ES.6603.76	chr11	+	2108	5	NIC	ENSMUSG00000020708.13	novel	1394	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	2464	junction_1	144.77396174727	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4536	False	NA	12	True	AATAAA	-16	NA	106146979	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106152537_106152731_106153135_106153229
ES.6603.77	chr11	+	1714	9	NIC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	1	-3	intron_retention	FALSE	canonical	3	2261	junction_4	191.818762116744	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4537	False	NA	12	True	AATAAA	-16	NA	106146980	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ES.6603.79	chr11	+	1585	9	NIC	ENSMUSG00000020708.13	novel	1394	10	NA	NA	1	-3	intron_retention	FALSE	canonical	3	2261	junction_5	169.29259988257	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4537	False	NA	12	True	AATAAA	-16	NA	106146980	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152859_106152943_106153135_106153229_106153518_106153622_106153710_106153834
ES.6603.8	chr11	+	3658	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-471	-209	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	151.038389675305	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAATTTTGTGATTTTT	NA	False	NA	8	True	TATAAA	-16	NA	106107280	106139756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115620_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.80	chr11	+	1311	11	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1047.80143156993	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAACTCCAGTTTGTTA	4537	False	NA	16	True	AATAAA	-20	NA	106146980	106153947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152950_106153135_106153229_106153329_106153406_106153518_106153622_106153712_106153834
ES.6603.84	chr11	+	1238	10	NIC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	816.345757055017	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4541	False	NA	12	True	AATAAA	-16	NA	106146984	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ES.6603.85	chr11	+	1544	9	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	6	-4	6	4	intron_retention	FALSE	canonical	3	2261	junction_6	199.601125685703	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTCCAGTTTGTTAATA	4542	False	NA	19	True	AATAAA	-23	NA	106146985	106153950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406
ES.6603.86	chr11	+	1385	10	FSM	ENSMUSG00000020708.13	ENSMUST00000133131.2	1394	10	6	3	6	-3	multi-exon	FALSE	canonical	3	2261	junction_6	179.113523556954	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4542	False	NA	12	True	AATAAA	-16	NA	106146985	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153518_106153622_106153710_106153834
ES.6603.87	chr11	+	4034	1	NIC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	7	-2926	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGCCAAGTGCTCGCT	4543	False	NA	NA	False	NA	NA	NA	106146986	106151020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147000_106151000
ES.6603.89	chr11	+	1469	9	NIC	ENSMUSG00000020708.13	novel	1394	10	NA	NA	14	4	intron_retention	FALSE	canonical	3	2411	junction_3	148.457853867689	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTCCAGTTTGTTAATA	4550	False	NA	19	True	AATAAA	-23	NA	106146993	106153950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106153135_106153229_106153518_106153622_106153710_106153834
ES.6603.9	chr11	+	3741	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-470	-227	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	150.688615441013	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATATACAAACT	NA	False	NA	-10	True	AAAAAG	-44	NA	106107281	106139738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125586_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ES.6603.91	chr11	+	1465	8	NIC	ENSMUSG00000020708.13	novel	1394	10	NA	NA	23	-3	intron_retention	FALSE	canonical	0	0	junction_3	916.24370699735	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4559	False	NA	12	True	AATAAA	-16	NA	106147002	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106147041_106147673_106147746_106151678_106151749_106152248_106152859_106152943_106153135_106153229_106153518_106153622_106153710_106153834
ES.6603.92	chr11	+	1447	11	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	56	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	790.564962542611	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAACTCCAGTTTGTTA	4592	False	NA	16	True	AATAAA	-20	NA	106147035	106153947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106147227_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ES.6603.93	chr11	+	1561	11	NNC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	241	-3	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	787.055677827179	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTACAACTCCAGTTT	4777	False	NA	12	True	AATAAA	-16	NA	106147220	106153943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106147530_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ES.6603.94	chr11	+	3542	8	NNC	ENSMUSG00000020712.12	novel	3511	8	NA	NA	-20	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.89968330431206	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATCCTTTGGTT	7171	False	NA	NA	False	AATAAA	-15	NA	106167477	106179564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106167620_106172728_106172805_106173612_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177620
ES.6603.95	chr11	+	3062	6	ISM	ENSMUSG00000020712.12	ENSMUST00000044462.4	3511	8	6278	7	6278	-7	3prime_fragment	FALSE	canonical	2	4	junction_1	2.0976176963403	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTATCCTTTGGTT	NA	False	NA	NA	False	AATAAA	-15	NA	106173851	106179564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177643
ES.6604.1	chr11	-	2438	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	6	411	combination_of_known_splicesites	TRUE	canonical	3	51	junction_9	25.5305699113827	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTATTTTATGTTT	NA	False	NA	NA	False	TATAAA	-9	NA	106084356	106053744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ES.6604.10	chr11	-	2930	8	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	18789	4	intron_retention	FALSE	canonical	3	108	junction_6	11.13552872566	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCACCAGTGTTTC	365	False	NA	-9	True	ATTAAA	-17	NA	106065573	106054151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106062091_106064078_106064201_106064504
ES.6604.11	chr11	-	4339	9	ISM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	17302	-25	17302	4	3prime_fragment	FALSE	canonical	3	107	junction_6	12.8980376414399	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCACCAGTGTTTC	NA	False	NA	-9	True	ATTAAA	-17	NA	106067060	106054151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504
ES.6604.12	chr11	-	2176	12	NNC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	6067	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	55.9388686406276	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGGCACCAGTGTTT	5855	False	NA	-10	True	ATTAAA	-16	NA	106078295	106054152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077950_106078007_106078118
ES.6604.13	chr11	-	2043	11	NNC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	40.378707260139	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGGAATGGCACCAGT	NA	False	NA	-14	True	ATTAAA	-12	NA	106084320	106054156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084214
ES.6604.14	chr11	-	2128	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	47.5345894069008	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGGGAATGGCACCAG	NA	False	NA	-15	True	ATTAAA	-11	NA	106084401	106054157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ES.6604.15	chr11	-	2089	11	NNC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	6109	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	43.0382388115499	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAATGTTGGGAATGG	5897	False	NA	-21	True	ATTAAA	-5	NA	106078253	106054163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106078118
ES.6604.16	chr11	-	4137	2	FSM	ENSMUSG00000069631.15	ENSMUST00000106867.2	3386	2	-21	-730	-21	730	multi-exon	FALSE	canonical	3	125	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGTGTTATATT	NA	False	NA	NA	False	NA	NA	NA	106084419	106073997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106078007_106084291
ES.6604.17	chr11	-	4215	2	NNC	ENSMUSG00000069631.15	novel	3386	2	NA	NA	5999	691	intron_retention	FALSE	canonical	2	3	junction_1	0	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	5787	False	NA	NA	False	NA	NA	NA	106078363	106074036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106078007_106078118
ES.6604.18	chr11	-	4481	6	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	21	8994	intron_retention	FALSE	non_canonical	0	0	junction_1	260.411213276234	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATCAAATAAAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	106107149	106079239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106079315_106097323_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.19	chr11	-	1227	1	Intergenic	novelGene_5310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGCCAGTAGAACAGCA	NA	False	NA	NA	False	NA	NA	NA	106087863	106086636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106086600_106087900
ES.6604.2	chr11	-	2067	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	5	13	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGTTTCCTTGTGTTC	NA	False	NA	0	True	ATTAAA	-26	NA	106084383	106054142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ES.6604.20	chr11	-	4626	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	567	0	-567	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAAGCCTTTTCTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	106107170	106088800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.21	chr11	-	3343	1	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	1588	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTAAGCCTTTTCTTTTG	6104	False	NA	NA	False	AATAAA	-20	NA	106092143	106088800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106088800_106092100
ES.6604.22	chr11	-	5928	8	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	6081	575	-4721	-575	intron_retention	FALSE	canonical	3	609	junction_6	47.3329500798894	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGCTAAGCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	106101089	106088808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831
ES.6604.23	chr11	-	5968	7	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	8583	577	-2219	-577	3prime_fragment	FALSE	canonical	3	609	junction_6	47.9632382374483	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAATTGCTAAGCC	NA	False	NA	NA	False	AATAAA	-10	NA	106098587	106088810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185
ES.6604.24	chr11	-	3842	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	10	1341	10	-1341	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGTCTTAATTTTATT	NA	False	NA	NA	False	NA	NA	NA	106107160	106089574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.25	chr11	-	4357	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-20	1521	intron_retention	FALSE	canonical	3	609	junction_5	39.8138229245543	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGAATATTCCTTTAT	NA	False	NA	92	True	ATTAAA	-32	NA	106107190	106090083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.26	chr11	-	3370	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	-32	1855	-32	1516	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAATCTTGAATATTCC	NA	False	NA	87	True	ATTAAA	-27	NA	106107202	106090088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.27	chr11	-	3387	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	16	1512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	186.764706396994	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATTAATCTTGAATA	NA	False	NA	83	True	ATTAAA	-23	NA	106107154	106090092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102676_106103906_106104188_106106974
ES.6604.28	chr11	-	3485	8	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	7240	1859	-3562	1512	intron_retention	FALSE	canonical	3	609	junction_6	47.3329500798894	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATTAATCTTGAATA	NA	False	NA	83	True	ATTAAA	-23	NA	106099930	106090092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831
ES.6604.29	chr11	-	6359	11	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	9	1512	intron_retention	FALSE	canonical	0	0	junction_9	202.160950729858	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATTAATCTTGAATA	NA	False	NA	83	True	ATTAAA	-23	NA	106107161	106090092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102676_106103906_106104188_106106974
ES.6604.3	chr11	-	2116	12	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	20	13	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	48.6209831245729	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGTTTCCTTGTGTTC	NA	False	NA	0	True	ATTAAA	-26	NA	106084342	106054142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106078633_106078748_106084291
ES.6604.31	chr11	-	3188	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-503	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107673	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
ES.6604.33	chr11	-	5135	12	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-479	1425	intron_retention	FALSE	canonical	3	42	junction_11	182.579406476803	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107649	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106107536
ES.6604.34	chr11	-	3336	14	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	17	1425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	241.941505963099	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107153	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106385_106106492_106106974
ES.6604.35	chr11	-	3163	14	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	0	1425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	179.965118250683	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107170	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106103987_106104070_106104188_106106974
ES.6604.36	chr11	-	4178	12	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-499	1425	intron_retention	FALSE	canonical	3	42	junction_11	182.611587079071	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107669	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
ES.6604.37	chr11	-	5229	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-11	1425	intron_retention	FALSE	canonical	3	609	junction_6	39.7905674274488	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107181	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.39	chr11	-	3241	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	21	1425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	186.453002717098	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107149	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092821_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.4	chr11	-	2613	8	ISM	ENSMUSG00000069631.15	ENSMUST00000122989.2	2083	12	27543	-11	18911	11	3prime_fragment	FALSE	canonical	3	11	junction_5	42.9840976764806	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCAGTGTTTCCTTGTGT	487	False	NA	-2	True	ATTAAA	-24	NA	106065451	106054144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061981_106062091_106064078_106064201_106064504
ES.6604.42	chr11	-	3171	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	18	1425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	186.764706396994	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107152	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102609_106103966_106104188_106106974
ES.6604.43	chr11	-	6071	10	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	21	1425	intron_retention	FALSE	canonical	3	609	junction_5	25.2268718181307	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107149	106090179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106094450_106095746_106095858_106096185_106096288_106098831_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.45	chr11	-	3168	14	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	21	1421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.965118250683	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107149	106090183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106090340_106090393_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.47	chr11	-	6187	11	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	21	1421	intron_retention	FALSE	canonical	3	609	junction_5	41.6078117665421	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107149	106090183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.48	chr11	-	2921	3	NNC	ENSMUSG00000078622.9	novel	1003	6	NA	NA	119	1421	intron_retention	FALSE	canonical	0	0	junction_1	322.5	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	4635	False	NA	-8	True	ATTAAA	-10	NA	106093612	106090183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106092936_106093209_106093320_106093553
ES.6604.49	chr11	-	2595	11	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-4917	1421	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	204.090274143576	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106101285	106090183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106092903_106092962_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113
ES.6604.5	chr11	-	2083	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-41	-525	-31	7	multi-exon	FALSE	canonical	3	87	junction_9	16.6340013225922	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCACCAGTGTTTCCTT	NA	False	NA	-6	True	ATTAAA	-20	NA	106084429	106054148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
ES.6604.51	chr11	-	3218	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	44	1421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	187.086488466342	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107126	106090183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104207_106106974
ES.6604.53	chr11	-	3150	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-456	1419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	242.099999426316	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATCTGTGTGCTGCTT	NA	False	NA	-10	True	ATTAAA	-8	NA	106107626	106090185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092821_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
ES.6604.54	chr11	-	4868	11	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-451	1419	intron_retention	FALSE	canonical	0	0	junction_8	292.719592784631	532	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAATCTGTGTGCTGCTT	NA	False	NA	-10	True	ATTAAA	-8	NA	106107621	106090185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106093005_106093209_106093320_106093553_106093822_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099853_106102498_106102607_106103906_106104188_106107536
ES.6604.55	chr11	-	3234	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	1959	0	1412	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTGACAAAATCTGTGT	NA	False	NA	-17	True	ATTAAA	-1	NA	106107170	106090192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.56	chr11	-	4039	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	17	1240	intron_retention	FALSE	canonical	3	609	junction_5	39.8138229245543	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTAGACTTAACATTG	NA	False	NA	NA	False	ATTAAA	-34	NA	106107153	106090364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.57	chr11	-	3059	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	-1	2135	-1	1236	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATAATTTTAGACTTAAC	NA	False	NA	NA	False	ATTAAA	-30	NA	106107171	106090368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.58	chr11	-	2884	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	12	2297	12	1074	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTGTGTGCTGTTGC	NA	False	NA	NA	False	NA	NA	NA	106107158	106090530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.59	chr11	-	2147	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	-2	3048	-2	323	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTATGTGGTGATAAAT	NA	False	NA	0	True	ATTAAA	-24	NA	106107172	106091281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.6	chr11	-	2307	10	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	4	6	intron_retention	FALSE	canonical	3	51	junction_8	26.0971593932187	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	-7	True	ATTAAA	-19	NA	106084384	106054149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ES.6604.60	chr11	-	3148	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-11	321	intron_retention	FALSE	canonical	3	609	junction_5	39.8138229245543	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACTATGTGGTGATAA	NA	False	NA	-2	True	ATTAAA	-22	NA	106107181	106091283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.62	chr11	-	2036	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-470	306	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGGAACGTAGAAC	NA	False	NA	-17	True	AATAAA	-38	NA	106107640	106091298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
ES.6604.64	chr11	-	2189	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-1	297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	186.764706396994	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTGTGAAAAAAGTGGA	NA	False	NA	-26	True	AATAAA	-29	NA	106107171	106091307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102676_106103906_106104188_106106974
ES.6604.65	chr11	-	4018	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	70	295	intron_retention	FALSE	canonical	3	609	junction_6	39.7905674274488	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACTTGTGAAAAAAGTG	NA	False	NA	-28	True	AATAAA	-27	NA	106107100	106091309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.66	chr11	-	1672	14	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	12	283	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	179.965118250683	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCACATTAAACTT	NA	False	NA	-40	True	AATAAA	-15	NA	106107158	106091321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106091367_106091787_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.67	chr11	-	1915	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	28	3250	28	121	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCAGTGCGTTACTTT	NA	False	NA	NA	False	TATAAA	-39	NA	106107142	106091483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.68	chr11	-	3895	12	NIC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	18	120	intron_retention	FALSE	canonical	3	609	junction_6	39.7905674274488	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCATCAGTGCGTTACTT	NA	False	NA	NA	False	TATAAA	-38	NA	106107152	106091484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106101289_106102498_106102607_106103906_106104188_106106974
ES.6604.69	chr11	-	526	3	ISM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	43	14281	43	-7396	5prime_fragment	FALSE	canonical	3	641	junction_2	8.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAATTGTTGATGTAA	NA	False	NA	NA	False	AATAAA	-6	NA	106107127	106102514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106102607_106103906_106104188_106106974
ES.6604.7	chr11	-	1955	10	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	4	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	41.7612260356422	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCACCAGTGTTTCCT	NA	False	NA	-7	True	ATTAAA	-19	NA	106084358	106054149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106084291
ES.6604.8	chr11	-	2128	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	-20	5	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	48.4848106060458	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGCACCAGTGTTTCC	NA	False	NA	-8	True	ATTAAA	-18	NA	106084418	106054150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077950_106078007_106084291
ES.6604.9	chr11	-	4967	6	NIC	ENSMUSG00000069631.15	novel	1517	11	NA	NA	19617	4	intron_retention	FALSE	canonical	3	108	junction_4	13.1362094989384	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCACCAGTGTTTC	1193	False	NA	-9	True	ATTAAA	-17	NA	106064745	106054151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106062091_106064078_106064201_106064504
ES.6605.1	chr11	-	4347	13	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	973	18477	intron_retention	FALSE	non_canonical	0	0	junction_1	0	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	106140551	106121490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106122106_106123629_106123736_106125676_106125796_106126430_106126608_106127818_106127949_106129331_106129433_106129960_106130010_106130827_106130924_106132374_106132651_106133697_106133923_106136147_106136263_106137600_106137706_106138318
ES.6605.10	chr11	-	2976	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	0	intron_retention	FALSE	canonical	3	632	junction_7	75.9938035088727	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146652	106139967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.11	chr11	-	2923	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	12	0	intron_retention	FALSE	canonical	3	632	junction_6	78.416460480171	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146610	106139967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.12	chr11	-	3194	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-5	0	intron_retention	FALSE	canonical	3	632	junction_5	72.2613480509832	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146635	106139967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.13	chr11	-	3423	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-211	-1	intron_retention	FALSE	canonical	3	632	junction_6	78.119909252422	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTTTCTGATAGTTT	NA	False	NA	-15	True	AATAAA	-12	NA	106147116	106139968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.14	chr11	-	3298	19	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	5	-1	intron_retention	FALSE	canonical	0	0	junction_5	191.178872031172	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTTTCTGATAGTTT	NA	False	NA	-15	True	AATAAA	-12	NA	106146900	106139968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141274_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.15	chr11	-	4844	14	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	632	junction_5	82.1585276683988	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAACTTTTCTGATAGTT	NA	False	NA	-16	True	AATAAA	-11	NA	106146912	106139969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106145513_106145611_106146252_106146410_106146504_106146586
ES.6605.16	chr11	-	3799	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	632	junction_7	78.6975727610293	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAACTTTTCTGATAGTT	NA	False	NA	-16	True	AATAAA	-11	NA	106146652	106139969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.17	chr11	-	4240	14	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	632	junction_4	82.33594051562	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAACTTTTCTGATAGTT	NA	False	NA	-16	True	AATAAA	-11	NA	106146645	106139969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140883_106140980_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.19	chr11	-	3701	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	632	junction_7	76.9862902657927	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAACTTTTCTGATAGT	NA	False	NA	-17	True	AATAAA	-10	NA	106146635	106139970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.2	chr11	-	4915	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	253	-2024	-22	2024	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAATGAAATAGTGTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	106146652	106137943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.20	chr11	-	3710	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	14	-4	intron_retention	FALSE	canonical	3	632	junction_7	78.0676246380053	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATAACTTTTCTGATAG	NA	False	NA	-18	True	AATAAA	-9	NA	106146608	106139971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.23	chr11	-	3659	17	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-31	-18	intron_retention	FALSE	canonical	3	632	junction_4	78.9683233565839	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146661	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106146252_106146410_106146504_106146586
ES.6605.24	chr11	-	3883	17	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-18	intron_retention	FALSE	canonical	3	632	junction_7	80.1489823703333	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146652	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.25	chr11	-	2830	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-12	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	183.359619327703	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146642	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140731_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.26	chr11	-	2851	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-6	-18	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_10	174.841034943173	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146636	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143398_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.27	chr11	-	2668	13	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	241	-18	intron_retention	FALSE	canonical	0	0	junction_9	226.670833295037	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106144580	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143715_106143827_106143906_106144012_106144114_106144231_106144307
ES.6605.28	chr11	-	2860	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-19	-18	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_12	183.239044692991	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146649	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143817_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.3	chr11	-	3133	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	270	-259	-5	259	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGCAGAAGACTTTTTT	NA	False	NA	NA	False	TATAAA	-26	NA	106146635	106139708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.30	chr11	-	3345	7	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	140	-18	intron_retention	FALSE	canonical	3	675	junction_3	43.8586745505759	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106144681	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140625_106140698_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906
ES.6605.31	chr11	-	3677	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	21	-18	intron_retention	FALSE	canonical	3	632	junction_7	78.0409832186166	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146884	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144688_106145432_106145513_106145611_106146252_106146410_106146504_106146586
ES.6605.33	chr11	-	3037	19	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-35	-18	intron_retention	FALSE	non_canonical	0	0	junction_14	192.415060625606	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146665	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106144503_106144587_106144690_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.35	chr11	-	2845	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-5	-18	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	183.239324382077	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146635	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141652_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.38	chr11	-	2823	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	9	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	243.086049579156	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146613	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143503_106143573_106143725_106143827_106143906_106144013_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.4	chr11	-	3197	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	-49	-4	-49	4	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGATAGTTTAATAA	NA	False	NA	-10	True	AATAAA	-17	NA	106146954	106139963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.40	chr11	-	3605	16	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-4	-18	intron_retention	FALSE	canonical	3	632	junction_4	80.8582848088075	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146909	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140883_106140980_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.42	chr11	-	3107	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-41	-18	intron_retention	FALSE	canonical	3	675	junction_8	70.5265907300218	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146671	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.43	chr11	-	2911	20	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-35	-18	intron_retention	FALSE	canonical	0	0	junction_10	188.104070328736	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146665	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143769_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.44	chr11	-	3356	18	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	0	-18	intron_retention	FALSE	canonical	0	0	junction_17	199.245914025998	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146905	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146582
ES.6605.48	chr11	-	3937	19	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	13	-18	intron_retention	FALSE	canonical	2	44	junction_10	182.632296036478	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146892	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143398_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.49	chr11	-	2966	20	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-32	-18	intron_retention	FALSE	canonical	0	0	junction_16	185.928068180671	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146662	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145527_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.5	chr11	-	6035	7	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	9	1	intron_retention	FALSE	canonical	3	686	junction_1	63.9281280467022	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	-13	True	AATAAA	-14	NA	106146613	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106143404_106143491_106143827_106143906_106144012_106144114_106145513_106145611_106146252_106146410_106146504_106146586
ES.6605.50	chr11	-	4081	17	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-28	-18	intron_retention	FALSE	canonical	3	675	junction_6	73.1404631086651	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146658	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141663_106141731_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.51	chr11	-	4085	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	1	-18	intron_retention	FALSE	canonical	3	675	junction_8	71.6574898231222	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146904	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.52	chr11	-	4802	12	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-18	intron_retention	FALSE	canonical	3	675	junction_7	82.9011160438888	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146652	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106142162_106143028_106143165_106143253_106143404_106143491_106145513_106145611_106146252_106146410_106146504_106146586
ES.6605.53	chr11	-	3398	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	1	-18	intron_retention	FALSE	canonical	3	675	junction_6	75.2869481880761	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146904	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140883_106140980_106141081_106141173_106141260_106141387_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.54	chr11	-	4042	18	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	1	-18	intron_retention	FALSE	canonical	0	0	junction_11	197.11149427791	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146904	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143715_106143827_106143906_106144012_106144114_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.57	chr11	-	4519	14	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	21	-18	intron_retention	FALSE	canonical	3	675	junction_6	74.6473365370192	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146884	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141663_106141731_106142162_106143028_106143165_106143253_106143404_106143491_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.59	chr11	-	3001	19	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	11	-18	intron_retention	FALSE	canonical	1	3	junction_6	193.114403500894	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146611	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141652_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.6	chr11	-	3867	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-42	1	intron_retention	FALSE	canonical	3	675	junction_8	74.3892316499312	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	-13	True	AATAAA	-14	NA	106146672	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106144503_106144587_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.60	chr11	-	4631	17	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-6	-18	intron_retention	FALSE	canonical	3	632	junction_7	79.8389002930276	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146636	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.61	chr11	-	3701	15	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	370	-18	intron_retention	FALSE	canonical	0	0	junction_4	213.702933713019	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146252	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141166_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145
ES.6605.62	chr11	-	2808	21	NNC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	-18	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_8	181.060839222622	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146652	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142097_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.63	chr11	-	3189	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	17	-18	intron_retention	FALSE	canonical	3	632	junction_7	78.1449750087206	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146888	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.65	chr11	-	3057	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	4	-18	intron_retention	FALSE	canonical	3	675	junction_8	73.2549244120645	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146626	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.66	chr11	-	3328	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-3	-18	intron_retention	FALSE	canonical	3	675	junction_7	73.2209787451319	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	False	NA	-32	True	NA	NA	NA	106146908	106139985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.69	chr11	-	1732	14	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-22	29	intron_retention	FALSE	canonical	3	675	junction_2	58.5890310229911	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCATTGCTGGTACCA	NA	False	NA	NA	False	AATAAA	-14	NA	106146652	106141805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.7	chr11	-	3050	19	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	9	1	intron_retention	FALSE	canonical	3	632	junction_5	77.0880729273623	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	-13	True	AATAAA	-14	NA	106146613	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.8	chr11	-	4723	9	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	-18	1	intron_retention	FALSE	canonical	3	675	junction_3	91.1053648255689	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	False	NA	-13	True	AATAAA	-14	NA	106146648	106139966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106142162_106143028_106143165_106143253_106143404_106143491_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6605.9	chr11	-	3758	18	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	632	junction_6	78.6684163002115	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146620	106139967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ES.6606.1	chr11	-	3249	14	NNC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	-3222	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	160.087180390698	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGGTCATTGAACAGT	NA	False	NA	-2	True	AATAAA	-25	NA	106167020	106153999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318_106164174_106166898
ES.6606.10	chr11	-	2966	11	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	-7	-8	intron_retention	FALSE	canonical	3	549	junction_5	27.1514272184723	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGGTGCCCAGACCTG	NA	False	NA	-15	True	AATAAA	-12	NA	106163805	106154012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106155123_106155258_106155382_106155497_106155634_106155765_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.12	chr11	-	3027	12	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	20	-8	intron_retention	FALSE	canonical	3	510	junction_5	33.5100823609061	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGGTGCCCAGACCTG	NA	False	NA	-15	True	AATAAA	-12	NA	106163771	106154012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.17	chr11	-	2512	13	NNC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	235	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	165.935458503868	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGGTGCCCAGACCTG	NA	False	NA	-15	True	AATAAA	-12	NA	106163556	106154012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106154946_106155020_106155123_106155258_106155397_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.18	chr11	-	2570	12	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	236	-9	intron_retention	FALSE	canonical	3	510	junction_4	35.7969480207923	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGGTGCCCAGACCT	NA	False	NA	-16	True	AATAAA	-11	NA	106163555	106154013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.2	chr11	-	2842	12	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	41	-2	intron_retention	FALSE	canonical	3	549	junction_6	26.0802955923014	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163750	106154006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.20	chr11	-	2074	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	-44	717	-44	-97	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTGGTTCCCAAAGCC	NA	False	NA	-2	True	CATAAA	-19	NA	106163842	106154721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.3	chr11	-	2981	10	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	109	-2	intron_retention	FALSE	canonical	3	549	junction_4	28.6201172448876	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163682	106154006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106155123_106155258_106155382_106155497_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.4	chr11	-	3724	6	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	57	-2	intron_retention	FALSE	canonical	3	549	junction_1	26.3165347262895	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163734	106154006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106156588_106156713_106156810_106157362_106157519_106157716_106158007_106158159_106158345_106163318
ES.6606.5	chr11	-	2876	13	NNC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	-71	-2	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_12	162.882541182971	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGACCTGGTCATT	NA	False	NA	-9	True	AATAAA	-18	NA	106163869	106154006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163258
ES.6606.7	chr11	-	2554	13	NNC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	197	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	165.317602578256	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCCCAGACCTGGTCA	NA	False	NA	-11	True	AATAAA	-16	NA	106163594	106154008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158360_106163318
ES.6606.8	chr11	-	3154	12	NIC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	133	-6	intron_retention	FALSE	canonical	3	510	junction_5	34.3537744386526	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGCCCAGACCTGGT	NA	False	NA	-13	True	AATAAA	-14	NA	106163658	106154010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ES.6606.9	chr11	-	2798	12	NNC	ENSMUSG00000078619.11	novel	2747	13	NA	NA	33	-8	intron_retention	FALSE	canonical	1	1	junction_9	173.419235971557	531	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGGTGCCCAGACCTG	NA	False	NA	-15	True	AATAAA	-12	NA	106163758	106154012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157794_106157963_106158007_106158159_106158345_106163318
ES.6607.1	chr11	-	689	4	ISM	ENSMUSG00000020713.7	ENSMUST00000103071.4	862	5	358	-2	358	2	3prime_fragment	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCCGGCTAGAGGTCTT	7415	False	NA	NA	False	AATAAA	-16	NA	106192333	106191094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106191393_106191590_106191753_106191920_106192038_106192221
ES.6608.1	chr11	-	1266	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	-69	-2	-69	-1	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTCGTGATATCATCT	5020	False	NA	-1	True	AATAAA	-19	NA	106205424	106202167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
ES.6609.1	chr11	-	1671	6	NNC	ENSMUSG00000001029.16	novel	1282	4	NA	NA	-42	-3	intron_retention	FALSE	canonical	0	0	junction_3	1.83303027798234	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGTGCCCGCCATGA	NA	False	NA	NA	False	AATACA	-13	NA	106278943	106268484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106268821_106269471_106269790_106271492_106272251_106273255_106273369_106273746_106273822_106278872
ES.661.1	chr1	+	163	1	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACATTC	NA	False	NA	NA	False	NA	NA	NA	65153923	65154086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_65153900_65154100
ES.6610.1	chr11	+	177	1	Intergenic	novelGene_5314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	106333342	106333519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106333300_106333500
ES.6610.2	chr11	+	155	2	Antisense	novelGene_ENSMUSG00000020715.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATAAATCTTAAC	NA	False	NA	NA	False	NA	NA	NA	106333343	106358053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106333440_106357994
ES.6610.3	chr11	+	175	1	Intergenic	novelGene_5316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAACTGAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	106350876	106351051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106350900_106351100
ES.6611.1	chr11	+	3405	1	Intergenic	novelGene_5317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGAAGCTATGTAGCC	NA	False	NA	NA	False	NA	NA	NA	106365080	106368485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106365100_106368500
ES.6612.1	chr11	+	153	1	Intergenic	novelGene_5318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACAATAAATAAATAAA	3661	False	NA	NA	False	NA	NA	NA	106369158	106369311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106369200_106369300
ES.6613.1	chr11	-	4035	23	NNC	ENSMUSG00000020715.10	novel	6946	22	NA	NA	-10	1668	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.43081032921446	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAACAAGCTGTGTAAAC	9423	False	NA	NA	False	NA	NA	NA	106378688	106283807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106284390_106285002_106285549_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.10	chr11	-	4315	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-65	2696	-9	105	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTTTCTCTAAGCCT	9424	False	NA	NA	False	NA	NA	NA	106378687	106288171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.11	chr11	-	3448	16	ISM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	64371	2831	64371	-30	3prime_fragment	FALSE	canonical	2	5	junction_11	5.73488351136175	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATATATCTTCTGTTTT	284	False	NA	NA	False	AATAAA	-35	NA	106314251	106288306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212
ES.6613.12	chr11	-	3146	18	ISM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-69	10516	-13	-7715	5prime_fragment	FALSE	canonical	2	5	junction_7	6.08816425079323	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGCCCGGCTTCTTTT	9420	False	NA	NA	False	NA	NA	NA	106378691	106295991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.13	chr11	-	1901	11	FSM	ENSMUSG00000020715.10	ENSMUST00000106801.8	1957	11	26	30	-2	-30	multi-exon	FALSE	canonical	3	10	junction_8	5.58927544499285	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTAGAGAATACAATTAA	9475	False	NA	NA	False	ATTAAA	-22	NA	106378636	106304621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.14	chr11	-	640	4	NIC	ENSMUSG00000020715.10	novel	1957	11	NA	NA	0	5804	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	7.58653778449403	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGCTTTGGTTGTTCA	9433	False	NA	NA	False	AATAAA	-15	NA	106378678	106319702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106319913_106325740_106325814_106349733_106349855_106378442
ES.6613.15	chr11	-	184	1	Intergenic	novelGene_5313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATATATTATATG	NA	False	NA	NA	False	NA	NA	NA	106331927	106331743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106331700_106331900
ES.6613.16	chr11	-	176	1	Intergenic	novelGene_5315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	9095	False	NA	NA	False	NA	NA	NA	106336007	106335831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106335800_106336000
ES.6613.17	chr11	-	2570	1	NIC	ENSMUSG00000020715.10	novel	3354	15	NA	NA	0	-26727	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGCGAAGATATATCAA	9433	False	NA	NA	False	TTTAAA	-11	NA	106378678	106376108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106376100_106378700
ES.6613.2	chr11	-	7567	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-55	-566	1	566	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCACTAGGGAAGAGG	9434	False	NA	NA	False	NA	NA	NA	106378677	106284909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.3	chr11	-	5405	8	NIC	ENSMUSG00000020715.10	novel	3354	15	NA	NA	78821	1	intron_retention	FALSE	canonical	3	12	junction_4	3.25137333621173	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTTGTTTCTTAAAG	2007	False	NA	0	True	AATAAA	-19	NA	106299801	106285474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298422_106298885_106299076_106299715
ES.6613.4	chr11	-	7033	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-86	-1	-30	1	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCTTGTTTCTTAAAG	9403	False	NA	0	True	AATAAA	-19	NA	106378708	106285474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.5	chr11	-	6898	21	NIC	ENSMUSG00000020715.10	novel	6946	22	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	6.82202316032422	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCTTGTTTCTTAAA	9416	False	NA	-1	True	AATAAA	-18	NA	106378695	106285475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106378442
ES.6613.6	chr11	-	6972	22	NNC	ENSMUSG00000020715.10	novel	6946	22	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.69991708074726	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCCTTGTTTCTTAA	9476	False	NA	-2	True	AATAAA	-17	NA	106378635	106285476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314329_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.7	chr11	-	7010	23	NNC	ENSMUSG00000020715.10	novel	6946	22	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	7.4523278297888	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCCTTGTTTCTTAA	9433	False	NA	-2	True	AATAAA	-17	NA	106378678	106285476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298009_106298099_106298167_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6613.8	chr11	-	6936	21	NIC	ENSMUSG00000020715.10	novel	6946	22	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	2	2	junction_19	6.4389440128021	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGGAGTTGCCTTGT	9457	False	NA	-9	True	AATAAA	-10	NA	106378654	106285483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106349733_106349855_106378442
ES.6613.9	chr11	-	6898	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	-55	103	1	-103	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGCCTATTTTTTTACC	9434	False	NA	-104	True	TTTAAA	-26	NA	106378677	106285578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ES.6614.1	chr11	-	244	1	Intergenic	novelGene_5319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTAATATTTTGGTT	6480	False	NA	NA	False	NA	NA	NA	106381631	106381387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106381400_106381600
ES.6615.1	chr11	-	177	1	Intergenic	novelGene_5320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAACATCATAG	8755	False	NA	NA	False	NA	NA	NA	106387053	106386876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106386900_106387100
ES.6616.1	chr11	+	150	2	Intergenic	novelGene_5321	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	320	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCTTGTGTGTCAC	4469	False	NA	27	True	AATAAA	-17	NA	106391698	106392040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106391767_106391958
ES.6616.2	chr11	+	299	1	FSM	ENSMUSG00000065126.3	ENSMUST00000083192.3	70	1	-78	-151	-78	151	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTGTCTTGTGTGTCA	4511	False	NA	26	True	AATAAA	-16	NA	106391740	106392039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106391700_106392000
ES.6616.3	chr11	+	278	2	Genic_Genomic	ENSMUSG00002076990.1	novel	135	1	NA	NA	-328	7	multi-exon	FALSE	canonical	3	320	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGACTACACGGCACTTC	4511	False	NA	NA	False	NA	NA	NA	106391740	106392210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_106391767_106391958
ES.6617.1	chr11	+	456	1	Antisense	novelGene_ENSMUSG00000040548.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATATTAATTTCTTTAA	5541	False	NA	NA	False	AATAAA	-17	NA	106392770	106393226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106392800_106393200
ES.6618.1	chr11	+	2798	1	Antisense	novelGene_ENSMUSG00000040548.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106402268	106405066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106402300_106405100
ES.6618.2	chr11	+	1323	2	Antisense	novelGene_ENSMUSG00000040548.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	106402268	106405066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106402936_106404410
ES.6619.1	chr11	+	4977	1	Antisense	novelGene_ENSMUSG00000040548.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGTTTTATTTGTAT	NA	False	NA	NA	False	NA	NA	NA	106407263	106412240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106407300_106412200
ES.662.1	chr1	+	1653	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAGGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65221617	65223270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_65221600_65223300
ES.6620.1	chr11	+	178	1	Intergenic	novelGene_5322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCAGGGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	106415390	106415568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106415400_106415600
ES.6621.1	chr11	+	159	1	Intergenic	novelGene_5323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	106456669	106456828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106456700_106456800
ES.6622.1	chr11	-	5026	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-64	8	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	44.3034241163113	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCATGTTATTTTTTA	3267	False	NA	NA	False	AATAAA	-19	NA	106503820	106392964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503663
ES.6622.10	chr11	-	4831	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	4547	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	NA	False	NA	-1	True	ATTAAA	-27	NA	106465392	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106465233
ES.6622.11	chr11	-	4841	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	5427	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	8758	False	NA	-1	True	ATTAAA	-27	NA	106498329	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106498160
ES.6622.12	chr11	-	4822	12	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-83	57	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	46.175196375658	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3248	False	NA	-1	True	ATTAAA	-27	NA	106503839	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404533_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.13	chr11	-	4490	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-71	57	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_11	45.0298512100584	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3260	False	NA	-1	True	ATTAAA	-27	NA	106503827	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459023_106459348_106459454_106503683
ES.6622.14	chr11	-	4863	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-69	56	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	59.4402127258045	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	3262	False	NA	-2	True	ATTAAA	-26	NA	106503825	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106495796_106495847_106503683
ES.6622.15	chr11	-	4781	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	47	56	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_11	60.6412019331809	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	2885	False	NA	-2	True	ATTAAA	-26	NA	106504202	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410759_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
ES.6622.17	chr11	-	4851	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	5300	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	59.8029170600305	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	8631	False	NA	-2	True	ATTAAA	-26	NA	106498456	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106495796_106495847_106498326
ES.6622.18	chr11	-	4740	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-54	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	47.9912182049319	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	3277	False	NA	-2	True	ATTAAA	-26	NA	106503810	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404533_106410759_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.19	chr11	-	4893	12	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-13	56	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	46.9919986155547	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	9977	False	NA	-2	True	ATTAAA	-26	NA	106504262	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
ES.6622.2	chr11	-	4124	7	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-35	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.6133119829162	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGCATGTTATTTTTTA	3296	False	NA	NA	False	AATAAA	-19	NA	106503791	106392964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106424696_106424844_106434997_106435246_106437489_106437830_106439702_106439741_106457790_106459454_106503683
ES.6622.20	chr11	-	4546	10	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-35	56	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	51.7889830507619	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	3296	False	NA	-2	True	ATTAAA	-26	NA	106503791	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.21	chr11	-	4916	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-70	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68.4816986906396	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	3261	False	NA	-2	True	ATTAAA	-26	NA	106503826	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106400090_106400215_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459446_106503697
ES.6622.22	chr11	-	3414	10	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-360	56	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	52.1957379651672	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	NA	False	NA	-2	True	ATTAAA	-26	NA	106458296	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790
ES.6622.23	chr11	-	4821	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	5646	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGTGTACTGCTTTAAT	8977	False	NA	-2	True	ATTAAA	-26	NA	106498110	106393162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106497960
ES.6622.24	chr11	-	4511	10	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-67	55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.0782700403033	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGTGTACTGCTTTAA	3264	False	NA	-3	True	ATTAAA	-25	NA	106503823	106393163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410759_106410841_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.25	chr11	-	4786	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-71	54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	48.5765987942057	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCAGTGTACTGCTTTA	3260	False	NA	-4	True	ATTAAA	-24	NA	106503827	106393164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439566_106439741_106457790_106459454_106503683
ES.6622.26	chr11	-	4698	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-4	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	61.3723226175373	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCAGTGTACTGCTTTA	3327	False	NA	-4	True	ATTAAA	-24	NA	106503760	106393164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410759_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457786_106459454_106503683
ES.6622.27	chr11	-	4382	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-84	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.5262022950509	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCAGTGTACTGCTTTA	3247	False	NA	-4	True	ATTAAA	-24	NA	106503840	106393164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106458905_106459348_106459454_106503683
ES.6622.28	chr11	-	3995	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-10	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	46.5262022950509	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTCAGTGTACTGCTT	3321	False	NA	-6	True	ATTAAA	-22	NA	106503766	106393166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106458594_106459348_106459454_106503683
ES.6622.29	chr11	-	4761	11	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-154	52	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	49.8005020055019	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTCAGTGTACTGCTT	3177	False	NA	-6	True	ATTAAA	-22	NA	106503910	106393166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.3	chr11	-	5052	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-111	-7	-111	7	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATGTTATTTTTT	3220	False	NA	NA	False	AATAAA	-18	NA	106503867	106392965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.30	chr11	-	4720	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-39	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.5262022950509	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTCAGTGTACTGCTT	3292	False	NA	-6	True	ATTAAA	-22	NA	106503795	106393166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394144_106394202_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.32	chr11	-	4819	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	47	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCAGTCAGTGTACTGC	2885	False	NA	-8	True	ATTAAA	-20	NA	106504202	106393168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459446_106504040
ES.6622.33	chr11	-	4789	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-54	49	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	67.7156534504558	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCAGTCAGTGTACTG	3277	False	NA	-9	True	ATTAAA	-19	NA	106503810	106393169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410759_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106495796_106495847_106503683
ES.6622.34	chr11	-	4758	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-54	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	48.4769690567141	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCATTCCAGTCAGTGTA	3277	False	NA	-12	True	ATTAAA	-16	NA	106503810	106393172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439721_106457800_106459454_106503683
ES.6622.35	chr11	-	4518	11	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-7	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	49.6201571944306	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGACCATTCCAGTCAGT	3324	False	NA	-15	True	ATTAAA	-13	NA	106503763	106393175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420154_106435036_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.36	chr11	-	4552	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-129	41	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_11	56.9429539100317	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGACCATTCCAGTCA	3202	False	NA	-17	True	ATTAAA	-11	NA	106503885	106393177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459023_106459348_106459454_106503663
ES.6622.37	chr11	-	4516	11	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-31	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	50.8314863052419	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTCTTTATTTTAA	3300	False	NA	-60	True	AATATA	-10	NA	106503787	106393220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106457790_106459454_106503683
ES.6622.38	chr11	-	4184	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-128	878	-128	-632	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAGTAGCCATAGAACA	3203	False	NA	NA	False	ATTAAA	-14	NA	106503884	106393850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.39	chr11	-	4176	12	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-126	-632	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	46.175196375658	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAGTAGCCATAGAACA	3205	False	NA	NA	False	ATTAAA	-14	NA	106503882	106393850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404533_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.4	chr11	-	5075	12	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	2	7	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	46.9919986155547	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATGTTATTTTTT	9992	False	NA	NA	False	AATAAA	-18	NA	106504247	106392965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
ES.6622.40	chr11	-	3462	10	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-7	-9379	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	64.203572840085	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTGTCTCTTGTACTT	9983	False	NA	NA	False	NA	NA	NA	106504256	106402597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106402938_106404412_106404539_106410759_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
ES.6622.41	chr11	-	3455	10	ISM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-88	9629	-88	-9383	5prime_fragment	FALSE	canonical	3	112	junction_9	21.4602704986807	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGACTGTCTCTTGT	3243	False	NA	NA	False	NA	NA	NA	106503844	106402601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.42	chr11	-	3969	8	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-13	-16574	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	52.1563583303677	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGCTGTTTGTTAAA	9977	False	NA	NA	False	NA	NA	NA	106504262	106409792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
ES.6622.43	chr11	-	7813	2	NIC	ENSMUSG00000040548.17	novel	2645	5	NA	NA	18037	4507	intron_retention	FALSE	canonical	3	144	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATACGAGGAAGCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	106439899	106430376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106437830_106439539
ES.6622.44	chr11	-	5511	4	ISM	ENSMUSG00000040548.17	ENSMUST00000103070.3	2645	5	12019	-4478	16	4478	3prime_fragment	FALSE	canonical	3	129	junction_3	6.16441400296898	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106457920	106430405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106435246_106437489_106437830_106439539_106439741_106457790
ES.6622.45	chr11	-	169	1	Intergenic	novelGene_5324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAAAAACAC	282	False	NA	NA	False	NA	NA	NA	106488144	106487975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106488000_106488100
ES.6622.6	chr11	-	4900	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-154	188	-154	58	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTACTGCTTTAATTT	3177	False	NA	0	True	ATTAAA	-28	NA	106503910	106393160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.7	chr11	-	4899	13	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-51	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	60.1248700622297	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3280	False	NA	-1	True	ATTAAA	-27	NA	106503807	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106412300_106412404_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ES.6622.8	chr11	-	4875	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	5227	57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.8027973869368	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	8558	False	NA	-1	True	ATTAAA	-27	NA	106498529	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106498326
ES.6622.9	chr11	-	4847	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	-82	57	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	44.3034241163113	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3249	False	NA	-1	True	ATTAAA	-27	NA	106503838	106393161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503663
ES.6623.1	chr11	-	207	1	Intergenic	novelGene_5325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	846	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTACACTGAACATGGCC	4953	False	NA	NA	False	AAAAAG	-4	NA	106525156	106524949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106524900_106525200
ES.6624.1	chr11	+	178	1	Intergenic	novelGene_5326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTAAGCTG	NA	False	NA	8	True	NA	NA	NA	106527815	106527993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106527800_106528000
ES.6625.1	chr11	+	218	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	805	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGGATTCCATTGTAAA	NA	False	NA	NA	False	TTTAAA	-17	NA	106544328	106697019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106544347_106696819
ES.6625.10	chr11	+	3261	2	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106665962	106669409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106668075_106668260
ES.6625.11	chr11	+	3521	2	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGGTCACTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	106665962	106669669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106668075_106668260
ES.6625.12	chr11	+	3336	2	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106666244	106669644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106668082_106668145
ES.6625.13	chr11	+	4025	8	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673560	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.14	chr11	+	5357	1	Antisense	novelGene_ENSMUSG00000020719.15_AS_novelGene_ENSMUSG00002076984.1_AS_novelGene_ENSMUSG00000093273.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673560	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106673600_106678900
ES.6625.15	chr11	+	5259	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673560	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215
ES.6625.16	chr11	+	4106	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106677189_106677276
ES.6625.17	chr11	+	4101	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051
ES.6625.18	chr11	+	5195	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTTGAACGCCATT	NA	False	NA	NA	False	NA	NA	NA	106673628	106678911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106677189_106677276
ES.6625.19	chr11	+	2900	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTGGAACTCAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	106673628	106676709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215
ES.6625.2	chr11	+	177	1	Intergenic	novelGene_5328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGAGTTC	NA	False	NA	NA	False	NA	NA	NA	106547635	106547812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106547600_106547800
ES.6625.20	chr11	+	4199	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676363_106676892_106676959_106677051
ES.6625.21	chr11	+	3943	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892
ES.6625.22	chr11	+	4091	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677371_106677734
ES.6625.23	chr11	+	5206	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961
ES.6625.24	chr11	+	4185	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892_106677371_106677734
ES.6625.25	chr11	+	4661	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106676363_106676892
ES.6625.26	chr11	+	2554	11	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCCCGGCAGCCGCT	NA	False	NA	NA	False	AATGAA	-11	NA	106673628	106679324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734_106677890_106679087
ES.6625.27	chr11	+	4321	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676363_106676892
ES.6625.28	chr11	+	3791	8	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276
ES.6625.29	chr11	+	3680	8	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676117_106676212_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.3	chr11	+	3298	1	Antisense	novelGene_ENSMUSG00000020717.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTCTGTCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	106570121	106573419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106570100_106573400
ES.6625.30	chr11	+	5103	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106677189_106677276
ES.6625.31	chr11	+	4578	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892
ES.6625.32	chr11	+	4851	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961
ES.6625.33	chr11	+	2674	12	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	339	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCCAATCAGCGTCGAG	NA	False	NA	NA	False	NA	NA	NA	106673628	106680008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106674988_106675239_106675350_106675704_106675879_106675961_106676118_106676215_106676360_106676892_106676959_106677053_106677189_106677276_106677357_106677722_106677899_106679096_106679286_106679841
ES.6625.34	chr11	+	5108	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215
ES.6625.35	chr11	+	3315	10	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106674987_106675237_106675351_106675706_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.36	chr11	+	4013	7	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276
ES.6625.37	chr11	+	4004	7	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.39	chr11	+	4360	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106677371_106677734
ES.6625.4	chr11	+	133	1	Intergenic	novelGene_5330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106613139	106613272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106613100_106613300
ES.6625.40	chr11	+	5207	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106678666_106678747
ES.6625.41	chr11	+	5014	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAACGCCATTACCCG	NA	False	NA	NA	False	NA	NA	NA	106673628	106678916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676959_106677051
ES.6625.42	chr11	+	4397	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276
ES.6625.43	chr11	+	2549	11	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCTGCGTCCCGGCAGC	NA	False	NA	NA	False	AATGAA	-7	NA	106673628	106679320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106674988_106675239_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734_106677899_106679096
ES.6625.44	chr11	+	4485	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051
ES.6625.45	chr11	+	4753	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215
ES.6625.46	chr11	+	4739	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106677189_106677276_106677371_106677734
ES.6625.47	chr11	+	5196	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676959_106677051
ES.6625.48	chr11	+	5098	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106676959_106677051
ES.6625.49	chr11	+	4115	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAACGCCATTACCCG	NA	False	NA	NA	False	NA	NA	NA	106673628	106678916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.5	chr11	+	171	1	Intergenic	novelGene_5331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	106631652	106631823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106631700_106631800
ES.6625.50	chr11	+	4569	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTTGAACGCCATTACC	NA	False	NA	NA	False	NA	NA	NA	106673628	106678914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106676959_106677051_106677189_106677276
ES.6625.51	chr11	+	4744	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676118_106676215_106677371_106677734
ES.6625.52	chr11	+	3960	8	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106675352_106675706_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276
ES.6625.53	chr11	+	3859	6	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.54	chr11	+	3782	8	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675879_106675961_106676118_106676215_106676363_106676892_106676959_106677051_106677189_106677276_106677371_106677734
ES.6625.55	chr11	+	4827	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106677371_106677734
ES.6625.56	chr11	+	4679	3	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675879_106675961_106676367_106676893
ES.6625.57	chr11	+	3674	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106676363_106676892_106677320_106678306
ES.6625.59	chr11	+	4759	2	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676363_106676892
ES.6625.6	chr11	+	251	1	Intergenic	novelGene_5332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAACCAAACCCAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	106640620	106640871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106640600_106640900
ES.6625.60	chr11	+	3874	7	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTGAACGCCA	NA	False	NA	NA	False	NA	NA	NA	106673630	106678909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106677189_106677276
ES.6625.61	chr11	+	4220	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673631	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892
ES.6625.63	chr11	+	2555	11	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCTGCGTCCCGGCAGC	NA	False	NA	NA	False	AATGAA	-7	NA	106673631	106679320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674845_106674926_106674987_106675237_106675350_106675704_106675879_106675961_106676118_106676215_106676363_106676892_106676969_106677053_106677189_106677276_106677371_106677734_106677899_106679096
ES.6625.64	chr11	+	3875	7	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673631	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674987_106675237_106675350_106675704_106675879_106675962_106676118_106676215_106676363_106676892_106676959_106677051
ES.6625.65	chr11	+	4565	4	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673631	106678917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106676118_106676215_106676363_106676892_106676959_106677051
ES.6625.67	chr11	+	4050	5	Antisense	novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	310	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGAACGCCATTACCCG	NA	False	NA	NA	False	NA	NA	NA	106673632	106678916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106674988_106675239_106676363_106676892_106677189_106677276_106677371_106677734
ES.6625.68	chr11	+	3304	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-600	-8	-577	0	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTTGAATTTATAACC	4519	False	NA	18	True	AATAAA	-20	NA	106679500	106709687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.69	chr11	+	3092	20	NNC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-334	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.5481330865732	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	4762	False	NA	10	True	AATAAA	-12	NA	106679743	106709679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705390_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.7	chr11	+	156	1	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	106662731	106662887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106662700_106662900
ES.6625.71	chr11	+	2541	19	NNC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	19.3777427369714	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	4825	False	NA	10	True	AATAAA	-12	NA	106679806	106709679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106679925_106680079_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.72	chr11	+	3548	18	NIC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-217	0	intron_retention	FALSE	canonical	0	0	junction_9	19.4575218285717	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	4879	False	NA	10	True	AATAAA	-12	NA	106679860	106709679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.73	chr11	+	3258	6	ISM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	-211	14925	-211	-9904	5prime_fragment	FALSE	canonical	3	42	junction_4	5.46260011349906	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTTGGGGGCTGGTGAG	4885	False	NA	NA	False	AAAAAG	-18	NA	106679866	106694761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288
ES.6625.74	chr11	+	2619	19	NNC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.8657538059487	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5074	False	NA	17	True	AATAAA	-19	NA	106680055	106709686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704693_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.75	chr11	+	2204	10	ISM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	-34	8156	-11	-3142	5prime_fragment	FALSE	canonical	3	42	junction_4	5.07961308918332	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATGAAATTTGTGTGGC	5085	False	NA	NA	False	ATTAAA	-29	NA	106680066	106701523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453
ES.6625.76	chr11	+	2608	19	FSM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_9	19.4787792098523	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5085	False	NA	17	True	AATAAA	-19	NA	106680066	106709686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.77	chr11	+	3473	19	NIC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_10	14.8295875420278	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5090	False	NA	17	True	AATAAA	-19	NA	106680071	106709686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.78	chr11	+	2752	21	NNC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.384807691443	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCTTTTGAATTTATAA	5099	False	NA	16	True	AATAAA	-18	NA	106680080	106709685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106687293_106687324_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.79	chr11	+	3449	19	NNC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_10	18.3125302848104	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTTTTGAATTTATAAC	5108	False	NA	17	True	AATAAA	-19	NA	106680089	106709686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704693_106705429_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.8	chr11	+	2379	3	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106665537	106669644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106666427_106667968_106668075_106668260
ES.6625.81	chr11	+	1569	8	ISM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	4	11841	4	-6827	5prime_fragment	FALSE	canonical	3	42	junction_4	4.69041575982343	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAAACAAATATAAA	5123	False	NA	NA	False	NA	NA	NA	106680104	106697838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061
ES.6625.82	chr11	+	4164	18	NIC	ENSMUSG00000018372.14	novel	2696	20	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_10	15.2431276704117	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGCTTTTGAATTTATA	5128	False	NA	15	True	AATAAA	-17	NA	106680109	106709684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.83	chr11	+	2401	18	NNC	ENSMUSG00000018372.14	novel	712	4	NA	NA	10397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.1421453730539	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	1838	False	NA	10	True	AATAAA	-12	NA	106690509	106709679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_106690530_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704693_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708433_106708566_106708659_106708807_106709021_106709094_106709359
ES.6625.84	chr11	+	223	1	Intergenic	novelGene_5333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGATTCCATTGTAAAAA	8127	False	NA	NA	False	TTTAAA	-19	NA	106696798	106697021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106696800_106697000
ES.6625.85	chr11	+	177	2	Intergenic	novelGene_5334	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	764	junction_1	0	398	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8128	False	NA	NA	False	NA	NA	NA	106696799	106698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106696851_106698249
ES.6625.86	chr11	+	178	1	Intergenic	novelGene_5335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9526	False	NA	NA	False	NA	NA	NA	106698197	106698375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106698200_106698400
ES.6625.87	chr11	+	4683	7	NIC	ENSMUSG00000018372.14	novel	2597	19	NA	NA	-1332	3	intron_retention	FALSE	canonical	3	55	junction_1	6.37704215656966	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGCTTTTGAATTTA	NA	False	NA	13	True	AATAAA	-15	NA	106701819	106709682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ES.6625.9	chr11	+	3901	1	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAACCTGAGTTGATAAT	NA	False	NA	NA	False	NA	NA	NA	106665537	106669438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106665500_106669400
ES.6626.1	chr11	+	174	1	Intergenic	novelGene_5337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAGAAAAAAGGATC	9401	False	NA	NA	False	NA	NA	NA	106734658	106734832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106734700_106734800
ES.6627.1	chr11	+	175	1	Intergenic	novelGene_5339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGTCTGA	481	False	NA	NA	False	NA	NA	NA	106751163	106751338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106751200_106751300
ES.6628.1	chr11	-	2992	1	Intergenic	novelGene_5327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106543791	106540799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106540800_106543800
ES.6628.10	chr11	-	3248	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9063	9	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTGTCATCTACTGG	361	False	NA	0	True	AATAAA	-28	NA	106615283	106545033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.100	chr11	-	3176	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9067	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.607244966974	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	357	False	NA	-10	True	AATAAA	-18	NA	106615287	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.101	chr11	-	2723	2	ISM	ENSMUSG00000020717.20	ENSMUST00000103069.10	3233	14	33939	1	10021	0	intron_retention	FALSE	canonical	3	518	junction_1	0	1570	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	8449	False	NA	-10	True	AATAAA	-18	NA	106572152	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106545989_106570374
ES.6628.103	chr11	-	3417	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9051	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	530.184102196796	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	373	False	NA	-10	True	AATAAA	-18	NA	106615271	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615208
ES.6628.104	chr11	-	3254	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9020	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_16	467.395643432842	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	404	False	NA	-10	True	AATAAA	-18	NA	106615240	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.106	chr11	-	3226	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	490.263407959103	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	416	False	NA	-10	True	AATAAA	-18	NA	106615228	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.107	chr11	-	3115	13	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9013	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	605.365517453895	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	411	False	NA	-10	True	AATAAA	-18	NA	106615233	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573782_106575043_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.109	chr11	-	3190	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9045	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	510.208044351233	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	379	False	NA	-10	True	AATAAA	-18	NA	106615265	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106575043_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.11	chr11	-	2954	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9028	8	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_11	475.57930302883	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGTGTCATCTACTG	396	False	NA	-1	True	AATAAA	-27	NA	106615248	106545034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.110	chr11	-	3907	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	0	intron_retention	FALSE	canonical	3	341	junction_14	378.285120845456	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	416	False	NA	-10	True	AATAAA	-18	NA	106615228	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.111	chr11	-	3001	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9061	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_12	503.771403184685	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	363	False	NA	-10	True	AATAAA	-18	NA	106615281	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.113	chr11	-	3173	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9053	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	534.373835021472	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	371	False	NA	-10	True	AATAAA	-18	NA	106615273	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545912_106545957_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.114	chr11	-	3163	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9017	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	489.443832636721	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	407	False	NA	-10	True	AATAAA	-18	NA	106615237	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605901_106606011_106615168
ES.6628.115	chr11	-	3311	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	615.793847177951	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	396	False	NA	-10	True	AATAAA	-18	NA	106615248	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106572781_106572860_106573705_106573789_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.12	chr11	-	3332	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9044	4	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_16	423.912869695826	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTCAAGTGTCATCT	380	False	NA	-5	True	AATAAA	-23	NA	106615264	106545038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.120	chr11	-	3229	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9023	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	490.375782602756	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	401	False	NA	-10	True	AATAAA	-18	NA	106615243	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.122	chr11	-	3238	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9036	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	490.375782602756	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	388	False	NA	-10	True	AATAAA	-18	NA	106615256	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106575043_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.123	chr11	-	3286	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	424.407330547226	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	377	False	NA	-10	True	AATAAA	-18	NA	106615267	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.125	chr11	-	2939	15	NNC	ENSMUSG00000020717.20	novel	3006	15	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	590.707376017629	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	377	False	NA	-10	True	AATAAA	-18	NA	106615267	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573699_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.127	chr11	-	3274	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9013	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	443.678202009943	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	411	False	NA	-10	True	AATAAA	-18	NA	106615233	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606097_106615196
ES.6628.128	chr11	-	2959	15	NNC	ENSMUSG00000020717.20	novel	3006	15	NA	NA	-9061	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_11	564.206884186346	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	363	False	NA	-10	True	AATAAA	-18	NA	106615281	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.13	chr11	-	3183	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	575.418835922751	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATTCAAGTGTCATC	409	False	NA	-6	True	AATAAA	-22	NA	106615235	106545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573775_106574414_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605851_106606008_106615196
ES.6628.131	chr11	-	3165	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	508.418722057691	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	416	False	NA	-10	True	AATAAA	-18	NA	106615228	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.134	chr11	-	3165	13	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9030	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	595.176648614137	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	394	False	NA	-10	True	AATAAA	-18	NA	106615250	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.135	chr11	-	3345	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9076	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	579.711062129709	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	348	False	NA	-10	True	AATAAA	-18	NA	106615296	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573789_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588182_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.136	chr11	-	2937	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_11	475.465577414519	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	416	False	NA	-10	True	AATAAA	-18	NA	106615228	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.138	chr11	-	3436	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9013	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	483.363217466948	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	411	False	NA	-10	True	AATAAA	-18	NA	106615233	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552687_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.14	chr11	-	3276	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9071	3	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.225031966434	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATTCAAGTGTCATC	353	False	NA	-6	True	AATAAA	-22	NA	106615291	106545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.146	chr11	-	3233	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	480.041090833784	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	377	False	NA	-10	True	AATAAA	-18	NA	106615267	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.148	chr11	-	2900	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9028	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	495.120677418244	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	396	False	NA	-10	True	AATAAA	-18	NA	106615248	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.149	chr11	-	3408	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9022	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	532.617970353752	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	402	False	NA	-10	True	AATAAA	-18	NA	106615242	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106600232_106600387_106605727_106605755_106605844_106606011_106615196
ES.6628.15	chr11	-	3252	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9052	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	595.265127005246	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATTCAAGTGTCATC	372	False	NA	-6	True	AATAAA	-22	NA	106615272	106545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590424_106590712_106605727_106605755_106605844_106606008_106615208
ES.6628.151	chr11	-	3294	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_16	468.010416550743	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	392	False	NA	-10	True	AATAAA	-18	NA	106615252	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.152	chr11	-	3100	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9018	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	487.624062846233	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	406	False	NA	-10	True	AATAAA	-18	NA	106615238	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586742_106587910_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.153	chr11	-	3201	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_15	537.019486507602	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	391	False	NA	-10	True	AATAAA	-18	NA	106615253	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615208
ES.6628.154	chr11	-	3401	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	530.591979668831	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	392	False	NA	-10	True	AATAAA	-18	NA	106615252	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106614494_106614704_106615208
ES.6628.156	chr11	-	3535	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9094	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	511.554489857874	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	330	False	NA	-10	True	AATAAA	-18	NA	106615314	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106614494_106614704_106615196
ES.6628.158	chr11	-	2991	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	543.460991138176	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	392	False	NA	-10	True	AATAAA	-18	NA	106615252	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.159	chr11	-	3171	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9013	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	510.089967699747	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTATCTGCATTCAAGTG	411	False	NA	-11	True	AATAAA	-17	NA	106615233	106545044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573788_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.161	chr11	-	3007	13	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9039	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	456.255654455068	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	385	False	NA	-12	True	AATAAA	-16	NA	106615259	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106615208
ES.6628.164	chr11	-	3237	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_15	423.646834049306	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	396	False	NA	-12	True	AATAAA	-16	NA	106615248	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.165	chr11	-	3190	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_15	525.81870978081	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	409	False	NA	-12	True	AATAAA	-16	NA	106615235	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.168	chr11	-	2886	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9028	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	495.239933482727	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	396	False	NA	-12	True	AATAAA	-16	NA	106615248	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.17	chr11	-	3245	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9078	3	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATTCAAGTGTCATC	346	False	NA	-6	True	AATAAA	-22	NA	106615298	106545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.171	chr11	-	4444	13	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9028	-2	intron_retention	FALSE	canonical	3	249	junction_12	424.298923388793	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	396	False	NA	-12	True	AATAAA	-16	NA	106615248	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.172	chr11	-	1389	7	NIC	ENSMUSG00000020717.20	novel	3006	15	NA	NA	6228	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	575.579635382166	1575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	4656	False	NA	-12	True	AATAAA	-16	NA	106575945	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106545989_106552827_106552851_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786
ES.6628.174	chr11	-	3448	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	10210	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	443.678202009943	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	NA	False	NA	-12	True	AATAAA	-16	NA	106631244	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106630942
ES.6628.177	chr11	-	3230	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9010	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	468.834143468277	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	414	False	NA	-12	True	AATAAA	-16	NA	106615230	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605827_106606011_106615196
ES.6628.179	chr11	-	3287	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9034	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	547.187064534378	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	390	False	NA	-12	True	AATAAA	-16	NA	106615254	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562629_106570385_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.18	chr11	-	3280	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9056	3	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	360.787927859136	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCATTCAAGTGTCATC	368	False	NA	-6	True	AATAAA	-22	NA	106615276	106545039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.180	chr11	-	3206	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_15	536.883749055603	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	396	False	NA	-12	True	AATAAA	-16	NA	106615248	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.182	chr11	-	3585	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	586.110587768	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	409	False	NA	-12	True	AATAAA	-16	NA	106615235	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106614494_106614701_106615208
ES.6628.183	chr11	-	3160	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9030	-2	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	554.60145646239	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	394	False	NA	-12	True	AATAAA	-16	NA	106615250	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.186	chr11	-	3470	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	535.580879879719	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	401	False	NA	-12	True	AATAAA	-16	NA	106615243	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106614494_106614704_106615208
ES.6628.187	chr11	-	3363	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9008	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	573.693679152908	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	416	False	NA	-12	True	AATAAA	-16	NA	106615228	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106572445_106572546_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615168
ES.6628.189	chr11	-	3873	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9033	-2	intron_retention	FALSE	canonical	3	341	junction_13	390.594252162631	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	391	False	NA	-12	True	AATAAA	-16	NA	106615253	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.190	chr11	-	3243	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	580.407175865287	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	391	False	NA	-12	True	AATAAA	-16	NA	106615253	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.191	chr11	-	3279	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	466.641732667222	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	391	False	NA	-12	True	AATAAA	-16	NA	106615253	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605783_106605844_106606011_106615208
ES.6628.192	chr11	-	3184	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-8996	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	515.759186502323	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	428	False	NA	-12	True	AATAAA	-16	NA	106615216	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573795_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.193	chr11	-	5867	11	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9032	-2	intron_retention	FALSE	non_canonical	0	0	junction_9	532.663580508373	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	392	False	NA	-12	True	AATAAA	-16	NA	106615252	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586839_106605840_106606011_106615168
ES.6628.194	chr11	-	3314	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9023	-2	intron_retention	FALSE	canonical	3	341	junction_13	382.231024660503	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	401	False	NA	-12	True	AATAAA	-16	NA	106615243	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106606011_106615168
ES.6628.196	chr11	-	5503	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	-2	intron_retention	FALSE	canonical	3	341	junction_14	377.702020548647	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	416	False	NA	-12	True	AATAAA	-16	NA	106615228	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.197	chr11	-	3378	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	537.370839072164	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	392	False	NA	-12	True	AATAAA	-16	NA	106615252	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552913_106553439_106553483_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.199	chr11	-	3338	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9022	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	543.182631436012	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTATCTGCATTCAAGT	402	False	NA	-12	True	AATAAA	-16	NA	106615242	106545045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552916_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582009_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.2	chr11	-	4562	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9058	1340	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_14	499.636990673208	1597	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGGTT	366	False	NA	NA	False	NA	NA	NA	106615278	106543702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
ES.6628.20	chr11	-	3340	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9045	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	537.370839072164	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	379	False	NA	-7	True	AATAAA	-21	NA	106615265	106545040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106553443_106553493_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.201	chr11	-	3477	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9040	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	428.607460919144	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTATCTGCATTCAAG	384	False	NA	-13	True	AATAAA	-15	NA	106615260	106545046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615168
ES.6628.203	chr11	-	3218	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9033	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	655.762251259948	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTTATCTGCATT	391	False	NA	-17	True	AATAAA	-11	NA	106615253	106545050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582013_106586579_106586856_106587877_106588179_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.204	chr11	-	3039	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9044	-204	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_15	423.836865891688	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTTTATTTATTCC	380	False	NA	-2	True	AGTAAA	-24	NA	106615264	106545247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615208
ES.6628.205	chr11	-	3016	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9057	-204	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTTTATTTATTCC	367	False	NA	-2	True	AGTAAA	-24	NA	106615277	106545247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.207	chr11	-	2999	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9017	-204	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	480.041090833784	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTCTTTATTTATTCC	407	False	NA	-2	True	AGTAAA	-24	NA	106615237	106545247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.208	chr11	-	2984	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9035	-205	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	437.249356774827	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	389	False	NA	-3	True	AGTAAA	-23	NA	106615255	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.209	chr11	-	2998	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9028	-205	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	396	False	NA	-3	True	AGTAAA	-23	NA	106615248	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.21	chr11	-	3362	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	531.473644101944	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	396	False	NA	-7	True	AATAAA	-21	NA	106615248	106545040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106592021_106592121_106605727_106605755_106605844_106606011_106615196
ES.6628.210	chr11	-	3011	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9071	-205	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_14	508.58063795835	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	353	False	NA	-3	True	AGTAAA	-23	NA	106615291	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615208
ES.6628.211	chr11	-	3141	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9063	-205	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_16	423.912869695826	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	361	False	NA	-3	True	AGTAAA	-23	NA	106615283	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.212	chr11	-	3043	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	-205	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	360.787927859136	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	396	False	NA	-3	True	AGTAAA	-23	NA	106615248	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.213	chr11	-	3270	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9012	-205	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_16	471.412886305625	1595	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTTCTTTATTTATTC	412	False	NA	-3	True	AGTAAA	-23	NA	106615232	106545248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615168
ES.6628.214	chr11	-	2977	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9035	-207	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTTTCTTTATTTAT	389	False	NA	-5	True	AGTAAA	-21	NA	106615255	106545250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.215	chr11	-	3081	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9030	-209	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAATTTTTCTTTATTT	394	False	NA	-7	True	AGTAAA	-19	NA	106615250	106545252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.216	chr11	-	3082	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9061	-211	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTAATTTTTCTTTAT	363	False	NA	-9	True	AGTAAA	-17	NA	106615281	106545254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.217	chr11	-	3052	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9013	-216	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	1595	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTCACTAATTTTTC	411	False	NA	-14	True	AGTAAA	-12	NA	106615233	106545259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.220	chr11	-	2813	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9019	-458	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_16	435.971934123918	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTCCCCTGTGTGA	405	False	NA	NA	False	AATACA	-17	NA	106615239	106545501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.221	chr11	-	2829	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	-461	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_16	418.197765529361	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTGGTTCCCCTGTG	377	False	NA	NA	False	AATACA	-14	NA	106615267	106545504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.222	chr11	-	2965	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9061	-462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	530.298088080866	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGCCTGGTTCCCCTGT	363	False	NA	NA	False	AATACA	-13	NA	106615281	106545505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106614494_106614701_106615208
ES.6628.223	chr11	-	2749	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9023	-463	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.327673602125	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGCCTGGTTCCCCTG	401	False	NA	NA	False	AATACA	-12	NA	106615243	106545506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.224	chr11	-	2777	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9011	-463	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	384.021504027516	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTTGCCTGGTTCCCCTG	413	False	NA	NA	False	AATACA	-12	NA	106615231	106545506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.225	chr11	-	2819	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	-467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	476.667972026185	1592	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGGTTTGCCTGGTTCC	391	False	NA	NA	False	AATACA	-8	NA	106615253	106545510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587884_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.226	chr11	-	2872	15	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9028	20	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_11	490.486602409135	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATGGTTCTTAAGGAA	396	False	NA	NA	False	NA	NA	NA	106615248	106551990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.227	chr11	-	2089	2	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-8998	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1578	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAATGGTTCTTAAGG	426	False	NA	NA	False	NA	NA	NA	106615218	106551992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106553830_106614966
ES.6628.228	chr11	-	3138	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9019	-15	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_15	442.308710693737	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	405	False	NA	NA	False	NA	NA	NA	106615239	106552025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.229	chr11	-	2575	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	389.387005432898	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTCTGCTTTCTACT	392	False	NA	NA	False	NA	NA	NA	106615252	106552622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.23	chr11	-	3451	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9048	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	429.37424235741	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCATTCAAGTGTCAT	376	False	NA	-7	True	AATAAA	-21	NA	106615268	106545040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615208
ES.6628.230	chr11	-	2556	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9044	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_15	404.096996056915	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTCTGCTTTCTACT	380	False	NA	NA	False	NA	NA	NA	106615264	106552622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.231	chr11	-	2514	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9113	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	530.534380496579	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGGTCTGCTTTCTAC	311	False	NA	NA	False	NA	NA	NA	106615333	106552623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582009_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615307
ES.6628.233	chr11	-	2477	15	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9021	-2	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	491.55986618195	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGGGTCTGCTTTCTA	403	False	NA	NA	False	NA	NA	NA	106615241	106552624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.234	chr11	-	2465	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9013	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	480.777120919871	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTCCAGGGTCTGCTT	411	False	NA	NA	False	NA	NA	NA	106615233	106552628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605901_106606011_106615196
ES.6628.235	chr11	-	2514	16	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9017	-6	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_15	382.336442881862	1578	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTCCAGGGTCTGCTT	407	False	NA	NA	False	NA	NA	NA	106615237	106552628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.236	chr11	-	2851	2	Genic_Genomic	ENSMUSG00000020717.20	novel	2142	1	NA	NA	-5674	-1182	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1550	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	8600	False	NA	NA	False	NA	NA	NA	106559826	106553804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_106555914_106559084
ES.6628.237	chr11	-	3625	7	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9041	2004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	611.658787415191	1553	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTGTGTGTGTGTAT	383	False	NA	NA	False	NA	NA	NA	106615261	106577604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590719_106605840_106606011_106615208
ES.6628.238	chr11	-	3672	8	NNC	ENSMUSG00000020717.20	novel	2977	16	NA	NA	-9032	2004	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_7	413.353186927181	1553	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGTGTGTGTGTGTAT	392	False	NA	NA	False	NA	NA	NA	106615252	106577604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.239	chr11	-	2804	1	Intergenic	novelGene_5329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1428	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCCACACATGC	NA	False	NA	NA	False	NA	NA	NA	106600564	106597760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106597800_106600600
ES.6628.240	chr11	-	2028	4	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9028	-18200	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	678.141741984832	1437	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTTTGTACCCCTCC	396	False	NA	NA	False	ATTAAA	-13	NA	106615248	106600108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106601892_106605727_106605755_106605844_106606011_106615196
ES.6628.241	chr11	-	1067	4	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9045	-19206	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	684.8391538651	1436	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTATTCATCTATTT	379	False	NA	NA	False	AATATA	-22	NA	106615265	106601114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106601892_106605727_106605755_106605844_106606011_106615168
ES.6628.242	chr11	-	763	3	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9048	-23318	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_2	674	1436	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAACTTAAAAA	376	False	NA	NA	False	NA	NA	NA	106615268	106605226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106605755_106605844_106606008_106615196
ES.6628.25	chr11	-	3323	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9061	1	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	363	False	NA	-8	True	AATAAA	-20	NA	106615281	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.26	chr11	-	3274	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9013	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	576.249097372154	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	411	False	NA	-8	True	AATAAA	-20	NA	106615233	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106575022_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588182_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.27	chr11	-	3267	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9062	1	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	362	False	NA	-8	True	AATAAA	-20	NA	106615282	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.28	chr11	-	3332	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	530.591979668831	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	409	False	NA	-8	True	AATAAA	-20	NA	106615235	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106609311_106609467_106615208
ES.6628.3	chr11	-	3755	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9008	491	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCTAAGTTTTTTGTT	416	False	NA	NA	False	NA	NA	NA	106615228	106544551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.30	chr11	-	3329	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9072	1	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_16	418.075950037789	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	352	False	NA	-8	True	AATAAA	-20	NA	106615292	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.32	chr11	-	3420	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9035	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_14	442.468216315002	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGCATTCAAGTGTCA	389	False	NA	-8	True	AATAAA	-20	NA	106615255	106545041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615168
ES.6628.37	chr11	-	3227	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9028	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	479.929050311953	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	396	False	NA	-9	True	AATAAA	-19	NA	106615248	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.38	chr11	-	3360	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9030	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	532.672340642169	1596	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	394	False	NA	-9	True	AATAAA	-19	NA	106615250	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606191_106615168
ES.6628.39	chr11	-	3275	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9045	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	499.161136307706	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	379	False	NA	-9	True	AATAAA	-19	NA	106615265	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.4	chr11	-	3784	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	490	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_15	368.337888357959	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCGGCTAAGTTTTTTGT	391	False	NA	NA	False	NA	NA	NA	106615253	106544552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.40	chr11	-	3223	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.327673602125	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.43	chr11	-	3275	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9052	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_16	467.549224514115	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	372	False	NA	-9	True	AATAAA	-19	NA	106615272	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615208
ES.6628.44	chr11	-	2901	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9028	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	563.686513238609	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	396	False	NA	-9	True	AATAAA	-19	NA	106615248	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606008_106615196
ES.6628.45	chr11	-	3214	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	377	False	NA	-9	True	AATAAA	-19	NA	106615267	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.46	chr11	-	6711	13	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9062	0	intron_retention	FALSE	canonical	3	239	junction_2	489.633217316799	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	362	False	NA	-9	True	AATAAA	-19	NA	106615282	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.47	chr11	-	3226	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	377	False	NA	-9	True	AATAAA	-19	NA	106615267	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.48	chr11	-	3873	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9058	0	intron_retention	FALSE	canonical	3	388	junction_13	382.139492484062	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	366	False	NA	-9	True	AATAAA	-19	NA	106615278	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.5	chr11	-	3689	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9036	489	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCGGCTAAGTTTTTTG	388	False	NA	NA	False	NA	NA	NA	106615256	106544553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.50	chr11	-	3291	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9058	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_15	360.626097533473	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	366	False	NA	-9	True	AATAAA	-19	NA	106615278	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.52	chr11	-	3260	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	485.305603603429	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.53	chr11	-	3257	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9011	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	518.224816078891	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	413	False	NA	-9	True	AATAAA	-19	NA	106615231	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573794_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.54	chr11	-	3282	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	495.958627306754	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	377	False	NA	-9	True	AATAAA	-19	NA	106615267	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590714_106605840_106606011_106615196
ES.6628.55	chr11	-	3193	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9050	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_14	437.449338174591	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	374	False	NA	-9	True	AATAAA	-19	NA	106615270	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615208
ES.6628.56	chr11	-	3093	16	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9030	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	485.346318507608	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	394	False	NA	-9	True	AATAAA	-19	NA	106615250	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545597_106545737_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.57	chr11	-	3186	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9036	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	388	False	NA	-9	True	AATAAA	-19	NA	106615256	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.59	chr11	-	3197	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9036	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	571.627555513397	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	388	False	NA	-9	True	AATAAA	-19	NA	106615256	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562591_106562625_106570374_106570443_106573727_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.6	chr11	-	3726	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9033	489	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCGGCTAAGTTTTTTG	391	False	NA	NA	False	NA	NA	NA	106615253	106544553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.60	chr11	-	2923	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9022	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	500.848286327466	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	402	False	NA	-9	True	AATAAA	-19	NA	106615242	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.61	chr11	-	4285	1	NIC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	4825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1539	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	NA	False	NA	-9	True	AATAAA	-19	NA	106549327	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106545000_106549300
ES.6628.62	chr11	-	6054	10	NIC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-5869	0	intron_retention	FALSE	canonical	3	518	junction_1	315.221066852541	1582	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	833	False	NA	-9	True	AATAAA	-19	NA	106588042	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106579878_106581761_106582011_106586579_106586856_106587877
ES.6628.64	chr11	-	3231	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9030	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_14	502.712570848282	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	394	False	NA	-9	True	AATAAA	-19	NA	106615250	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605901_106606008_106615168
ES.6628.65	chr11	-	3247	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9038	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	610.331158019136	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	386	False	NA	-9	True	AATAAA	-19	NA	106615258	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106592021_106592121_106605727_106605755_106605844_106606011_106615208
ES.6628.66	chr11	-	3305	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9022	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	537.370839072164	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	402	False	NA	-9	True	AATAAA	-19	NA	106615242	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106553443_106553483_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.67	chr11	-	3230	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9017	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	509.618346780216	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	407	False	NA	-9	True	AATAAA	-19	NA	106615237	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570430_106571880_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.7	chr11	-	3323	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9069	10	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_16	418.197765529361	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTGTCATCTACTGGA	355	False	NA	1	True	AATAAA	-29	NA	106615289	106545032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.72	chr11	-	3087	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	504.737246000332	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	377	False	NA	-9	True	AATAAA	-19	NA	106615267	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576018_106579748_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.75	chr11	-	3404	17	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	512.684779951336	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106609355_106609467_106615168
ES.6628.76	chr11	-	2896	14	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_10	549.293230665041	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	392	False	NA	-9	True	AATAAA	-19	NA	106615252	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.77	chr11	-	3240	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9033	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	462.558633900523	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	391	False	NA	-9	True	AATAAA	-19	NA	106615253	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.78	chr11	-	3189	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9044	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	554.505079014666	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	380	False	NA	-9	True	AATAAA	-19	NA	106615264	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.79	chr11	-	3211	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9061	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	510.208044351233	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	363	False	NA	-9	True	AATAAA	-19	NA	106615281	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573790_106575049_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.8	chr11	-	3889	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9008	9	intron_retention	FALSE	canonical	3	388	junction_14	370.348766953089	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTGTCATCTACTGG	416	False	NA	0	True	AATAAA	-28	NA	106615228	106545033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.82	chr11	-	3212	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9029	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_14	438.04964307247	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	395	False	NA	-9	True	AATAAA	-19	NA	106615249	106545042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615168
ES.6628.83	chr11	-	3429	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9047	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	549.795734324093	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	377	False	NA	-10	True	AATAAA	-18	NA	106615267	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106592021_106592121_106605727_106605755_106605844_106606011_106615168
ES.6628.84	chr11	-	6067	13	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9028	0	intron_retention	FALSE	canonical	3	387	junction_12	394.308351913688	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	396	False	NA	-10	True	AATAAA	-18	NA	106615248	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106590712_106605727_106605755_106605844_106606011_106615208
ES.6628.85	chr11	-	3295	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-7624	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_14	441.059213249011	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	1800	False	NA	-10	True	AATAAA	-18	NA	106613844	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106613697
ES.6628.88	chr11	-	3529	18	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9065	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	534.60761408538	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	359	False	NA	-10	True	AATAAA	-18	NA	106615285	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106614494_106614704_106615196
ES.6628.89	chr11	-	3320	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9058	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	557.87734215407	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	366	False	NA	-10	True	AATAAA	-18	NA	106615278	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570444_106573675_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615168
ES.6628.9	chr11	-	3178	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9047	9	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.471167808096	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGTGTCATCTACTGG	377	False	NA	0	True	AATAAA	-28	NA	106615267	106545033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
ES.6628.92	chr11	-	3265	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9011	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	484.661788146011	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	413	False	NA	-10	True	AATAAA	-18	NA	106615231	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571906_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
ES.6628.93	chr11	-	3176	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9022	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	437.249356774827	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	402	False	NA	-10	True	AATAAA	-18	NA	106615242	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605990_106615196
ES.6628.95	chr11	-	3188	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9032	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	429.757988743536	1596	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	392	False	NA	-10	True	AATAAA	-18	NA	106615252	106545043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106605914_106615175
ES.6629.1	chr11	-	1357	8	NIC	ENSMUSG00000020718.13	novel	1506	8	NA	NA	25	43	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTATTGTCCTTTTGA	4386	False	NA	NA	False	TATAAA	-16	NA	106670274	106659035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
ES.6629.100	chr11	-	4779	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	22	-2	intron_retention	FALSE	canonical	3	497	junction_8	1231.38265782818	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	8985	False	NA	-11	True	AATAAA	-43	NA	106679989	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675351_106675705_106675879_106675961_106676123_106676220_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.102	chr11	-	3489	13	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1168.25535581434	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106674683_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.104	chr11	-	4066	8	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_5	166.403983468803	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106677371_106677734_106677901_106679098
ES.6629.105	chr11	-	4437	9	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	32	-2	intron_retention	FALSE	canonical	0	0	junction_3	1680.69812503614	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	8995	False	NA	-11	True	AATAAA	-43	NA	106679979	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106674989_106675239_106675351_106675705_106676123_106676218_106676363_106676892_106676959_106677051_106677186_106677273_106677901_106679098_106679286_106679841
ES.6629.106	chr11	-	2316	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1169.03004666262	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAATTAAGTGAAATTG	9654	False	NA	-14	True	AATAAA	-40	NA	106679320	106672378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674982_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.108	chr11	-	2552	11	ISM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	0	1253	0	511	5prime_fragment	FALSE	canonical	3	3830	junction_6	142.502245596341	1988	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTACCTTCTTGGGAATACA	9654	False	NA	NA	False	NA	NA	NA	106679320	106673626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.109	chr11	-	1081	9	ISM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	147	2910	120	685	5prime_fragment	FALSE	canonical	3	3830	junction_4	159.243867621331	1932	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGATGTGATGAACT	9801	False	NA	-26	True	AATAAA	-22	NA	106679173	106675283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.11	chr11	-	3630	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1164.1479597638	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673629_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.12	chr11	-	5604	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_4	157.987143464271	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.13	chr11	-	5512	7	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_4	179.498142980181	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9654	False	NA	-8	True	AATAAA	-18	NA	106679320	106671180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106677371_106677734_106677901_106679098
ES.6629.18	chr11	-	3884	12	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_8	165.144014286154	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677901_106679098
ES.6629.2	chr11	-	1587	9	NIC	ENSMUSG00000020718.13	novel	1770	8	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	23.9318694422312	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGTTTTGGACTTTTG	4327	False	NA	NA	False	AATAAA	-31	NA	106670333	106659080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669542_106669634_106669784
ES.6629.20	chr11	-	3651	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	18	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	1504.82422256834	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9283	False	NA	-9	True	AATAAA	-17	NA	106679691	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676118_106676216_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
ES.6629.21	chr11	-	3484	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	1569.52799875915	2100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9657	False	NA	-9	True	AATAAA	-17	NA	106679317	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677348_106677740_106677901_106679102
ES.6629.22	chr11	-	3875	12	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_7	163.407617897015	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.23	chr11	-	4900	13	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	3	497	junction_12	1033.14636413348	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	8983	False	NA	-9	True	AATAAA	-17	NA	106679991	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.25	chr11	-	6137	6	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_3	197.984443833348	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677901_106679098
ES.6629.27	chr11	-	5330	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_4	159.243867621331	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.3	chr11	-	2440	19	Fusion	ENSMUSG00000020719.15_ENSMUSG00000020718.13	novel	1506	8	NA	NA	0	-2	multi-exon	FALSE	canonical	0	0	junction_7	2006.39190317739	2129	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGTTTTGGACTTTTG	9654	False	NA	NA	False	AATAAA	-31	NA	106679320	106659080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106673420_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.31	chr11	-	2991	5	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-254	-1	intron_retention	FALSE	canonical	3	4106	junction_3	128.406337460423	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	NA	False	NA	-9	True	AATAAA	-17	NA	106676126	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673520_106674784_106674989_106675239_106675351_106675705_106675879_106675961
ES.6629.32	chr11	-	6220	5	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_2	157.294906147656	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106676123_106676220_106676363_106676892_106676959_106677051_106677901_106679098
ES.6629.33	chr11	-	5227	4	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-515	-1	intron_retention	FALSE	canonical	3	3830	junction_3	137.995974176383	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	NA	False	NA	-9	True	AATAAA	-17	NA	106677391	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675351_106675705_106676123_106676220_106676363_106676892
ES.6629.34	chr11	-	3481	13	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-13	-1	combination_of_known_splicesites	FALSE	canonical	3	88	junction_12	1145.54124458945	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	8950	False	NA	-9	True	AATAAA	-17	NA	106680024	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679841
ES.6629.35	chr11	-	5361	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	intron_retention	FALSE	canonical	3	3830	junction_6	148.62763148051	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677901_106679098
ES.6629.37	chr11	-	3571	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_7	1431.75338774302	2100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	8999	False	NA	-9	True	AATAAA	-17	NA	106679975	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676075_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.38	chr11	-	3495	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	1167.41194052866	2100	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677161_106677273_106677371_106677734_106677901_106679098
ES.6629.39	chr11	-	3570	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1169.07686754217	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	9654	False	NA	-9	True	AATAAA	-17	NA	106679320	106671181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673570_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.4	chr11	-	5321	8	NNC	ENSMUSG00000020718.13	novel	2728	7	NA	NA	-9	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.6154091444148	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACAGTTTTGGACTTTT	4352	False	NA	NA	False	AATAAA	-30	NA	106670308	106659081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106662722_106662925_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
ES.6629.40	chr11	-	5442	7	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-1004	-2	intron_retention	FALSE	canonical	3	3830	junction_3	181.964663846827	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCTTCATTTATTTAT	NA	False	NA	-10	True	AATAAA	-16	NA	106677880	106671182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734
ES.6629.42	chr11	-	5535	8	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_5	163.86554966602	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCTTCATTTATTTAT	9654	False	NA	-10	True	AATAAA	-16	NA	106679320	106671182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106677186_106677273_106677901_106679098
ES.6629.43	chr11	-	6229	5	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_3	215.349135127123	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTCTTCATTTATTTAT	9654	False	NA	-10	True	AATAAA	-16	NA	106679320	106671182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675879_106675961_106676123_106676220_106676363_106676892_106677901_106679098
ES.6629.44	chr11	-	3555	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-2	-118	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	2099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGGGGCTTGGAAAA	9263	False	NA	NA	False	NA	NA	NA	106679711	106671298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
ES.6629.45	chr11	-	3515	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	20	-121	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	2099	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATTGTGGGGCTTGGA	8983	False	NA	NA	False	NA	NA	NA	106679991	106671301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.47	chr11	-	4144	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	6	intron_retention	FALSE	canonical	3	3830	junction_4	159.243867621331	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATTGTACTTTATTTT	9654	False	NA	-3	True	AATAAA	-23	NA	106679320	106672367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.5	chr11	-	1498	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	3	5	3	-5	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATACAGTTTTGGACTT	4322	False	NA	NA	False	AATAAA	-28	NA	106670338	106659083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
ES.6629.51	chr11	-	5206	5	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	intron_retention	FALSE	canonical	3	4137	junction_2	122.109326015665	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675879_106675961_106676123_106676220_106677371_106677734_106677901_106679098
ES.6629.53	chr11	-	3734	13	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	497	junction_12	1033.14636413348	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	8959	False	NA	-7	True	AATAAA	-19	NA	106680015	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.54	chr11	-	3787	11	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	intron_retention	FALSE	canonical	0	0	junction_3	1258.12807376674	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106674845_106674926_106674989_106675239_106675331_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.55	chr11	-	3936	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-9	2	intron_retention	FALSE	canonical	3	3830	junction_5	150.168629493482	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9607	False	NA	-7	True	AATAAA	-19	NA	106679367	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.56	chr11	-	3677	11	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	3830	junction_6	172.933773450995	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.57	chr11	-	3498	11	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	1269.12303974043	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9654	False	NA	-7	True	AATAAA	-19	NA	106679320	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677734_106677901_106679098
ES.6629.58	chr11	-	3982	12	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-25	2	intron_retention	FALSE	canonical	3	89	junction_11	1178.50494306407	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGAAATTGTACTTTA	9240	False	NA	-7	True	AATAAA	-19	NA	106679734	106672371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
ES.6629.6	chr11	-	5413	11	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-23	3	intron_retention	FALSE	canonical	3	3830	junction_6	142.502245596341	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTTATTTATTCGCG	9242	False	NA	-5	True	AATAAA	-21	NA	106679732	106671177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.64	chr11	-	2465	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8961	False	NA	-9	True	AATAAA	-45	NA	106680013	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.68	chr11	-	3942	12	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	-2	0	intron_retention	FALSE	canonical	3	497	junction_11	1062.08140417338	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8961	False	NA	-9	True	AATAAA	-45	NA	106680013	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.70	chr11	-	2445	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1434.82707862729	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8983	False	NA	-9	True	AATAAA	-45	NA	106679991	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676125_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.74	chr11	-	2540	12	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_7	135.889539487588	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.75	chr11	-	2683	12	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_7	163.407617897015	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.76	chr11	-	2381	13	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1169.07686754217	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673573_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.77	chr11	-	4257	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_6	157.637043552586	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677901_106679098
ES.6629.78	chr11	-	4160	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_5	148.95769554383	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.79	chr11	-	4339	8	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3830	junction_5	168.517424763671	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677901_106679098
ES.6629.81	chr11	-	2640	15	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1725.87467915931	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673629_106673842_106673932_106674044_106674159_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.82	chr11	-	2335	13	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1169.03004666262	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675232_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.83	chr11	-	5502	7	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	20	0	intron_retention	FALSE	canonical	3	497	junction_6	1393.6272516949	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8983	False	NA	-9	True	AATAAA	-45	NA	106679991	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106675879_106675961_106676123_106676220_106676959_106677051_106677186_106677273_106677901_106679098_106679286_106679841
ES.6629.85	chr11	-	1698	9	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1382.61653554954	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	NA	False	NA	-9	True	AATAAA	-45	NA	106676958	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675972_106676123_106676220_106676363_106676892
ES.6629.86	chr11	-	3630	12	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1217.51377204694	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676160_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.87	chr11	-	3858	10	NNC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	1316.81583777584	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677157_106677273_106677371_106677734_106677901_106679098
ES.6629.89	chr11	-	3707	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_8	1313.83085143136	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAGTGAAATTGTACT	9654	False	NA	-10	True	AATAAA	-44	NA	106679320	106672374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677734_106677901_106679098
ES.6629.9	chr11	-	3662	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	2100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATTTATTTATTCGC	8959	False	NA	-6	True	AATAAA	-20	NA	106680015	106671178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.6629.90	chr11	-	3925	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	3830	junction_5	182.094670805607	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAGTGAAATTGTACT	9654	False	NA	-10	True	AATAAA	-44	NA	106679320	106672374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.91	chr11	-	4240	9	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_4	157.876336098859	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674989_106675239_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.94	chr11	-	3886	10	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_5	114.143942047631	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106674845_106674926_106674989_106675239_106675351_106675705_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.95	chr11	-	2101	12	NIC	ENSMUSG00000020719.15	novel	3593	12	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	107	junction_1	1173.36496404272	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.96	chr11	-	2421	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1774.46886794714	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674270_106674364_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676218_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ES.6629.97	chr11	-	1332	6	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1696.95456627454	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	NA	False	NA	-11	True	AATAAA	-43	NA	106675878	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675245_106675351_106675705
ES.6629.98	chr11	-	2690	12	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3830	junction_8	165.144014286154	2074	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	9654	False	NA	-11	True	AATAAA	-43	NA	106679320	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677901_106679098
ES.6629.99	chr11	-	2408	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_2	1420.45145336296	2074	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAAGTGAAATTGTAC	8965	False	NA	-11	True	AATAAA	-43	NA	106680009	106672375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106673083_106673294_106673469_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
ES.663.11	chr1	-	2424	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	3	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	378.15957830877	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAGTGTTTATTATGT	NA	False	NA	-13	True	ATTAAA	-21	NA	65225635	65197781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218921_65218975_65225367
ES.663.12	chr1	-	2392	11	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	360.680481867262	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAAGTGTTTATTATGT	NA	False	NA	-13	True	ATTAAA	-21	NA	65225654	65197781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218176_65220786_65220858_65225463
ES.663.13	chr1	-	2578	14	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	437.499038037827	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAAGTGTTTATTATG	NA	False	NA	-14	True	ATTAAA	-20	NA	65225634	65197782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218176_65218488_65218572_65218921_65218975_65220457_65220529_65220786_65220858_65225463
ES.663.14	chr1	-	2344	9	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	-834	-6	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_7	380.92937337517	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAAGTGTTTATTATG	NA	False	NA	-14	True	ATTAAA	-20	NA	65219174	65197782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210399_65214389_65214528_65218921
ES.663.15	chr1	-	5044	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	9419	8	5802	-6	intron_retention	FALSE	canonical	3	794	junction_4	54.5727725152388	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAAGTGTTTATTATG	NA	False	NA	-14	True	ATTAAA	-20	NA	65208921	65197782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265
ES.663.16	chr1	-	2801	13	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	146	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	426.941513038444	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTGAAGTGTTTATT	NA	False	NA	-17	True	ATTAAA	-17	NA	65225451	65197785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218572_65218921_65218975_65220457_65220529_65220786_65220858_65225367
ES.663.17	chr1	-	2654	14	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	437.887518993109	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTGAAGTGTTTATT	NA	False	NA	-17	True	ATTAAA	-17	NA	65225628	65197785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218176_65218488_65218657_65218921_65218975_65220457_65220529_65220786_65220858_65225463
ES.663.18	chr1	-	4077	11	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	-2326	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	367.62427830599	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTGAAGTGTTTATT	NA	False	NA	-17	True	ATTAAA	-17	NA	65220666	65197785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218223_65218497_65218657_65218921
ES.663.19	chr1	-	5447	8	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	465	11	465	-9	3prime_fragment	FALSE	canonical	3	773	junction_5	97.0558433825284	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTTGAAGTGTTTATT	NA	False	NA	-17	True	ATTAAA	-17	NA	65217875	65197785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389
ES.663.2	chr1	-	4724	11	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	360.083656946549	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	False	NA	-8	True	ATTAAA	-26	NA	65225628	65197776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65220529_65220786_65220858_65225463
ES.663.21	chr1	-	5985	10	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	116	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	374.319530763639	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCTTTGAAGTGTTTA	NA	False	NA	-19	True	ATTAAA	-15	NA	65218224	65197787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65212291_65212330_65213468_65213595_65214528_65218148
ES.663.22	chr1	-	2386	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	12	-11	combination_of_known_splicesites	FALSE	canonical	2	8	junction_9	373.351785258294	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCTTTGAAGTGTTTA	NA	False	NA	-19	True	ATTAAA	-15	NA	65225585	65197787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225367
ES.663.23	chr1	-	2706	11	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	-6	-11	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	410.760769791858	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCTTTGAAGTGTTTA	NA	False	NA	-19	True	ATTAAA	-15	NA	65225624	65197787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218921_65219299_65220786_65220858_65225463
ES.663.24	chr1	-	1940	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	116	246	116	-244	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTCTGCTCTTTGATTT	NA	False	NA	NA	False	AATAAA	-11	NA	65218224	65198020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ES.663.25	chr1	-	2004	10	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	-6	-244	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	374.810898823051	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTCTGCTCTTTGATTT	NA	False	NA	NA	False	AATAAA	-11	NA	65225624	65198020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225555
ES.663.26	chr1	-	795	3	ISM	ENSMUSG00000025950.17	ENSMUST00000188109.7	756	5	-28	4557	-7	364	5prime_fragment	FALSE	canonical	3	72	junction_2	465	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCCCAAATATCCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	65225625	65209914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_65210410_65214389_65214528_65225463
ES.663.3	chr1	-	2358	10	NIC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_9	367.996712277316	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	False	NA	-8	True	ATTAAA	-26	NA	65225642	65197776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225463
ES.663.4	chr1	-	2437	12	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	401.129541533541	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTATTATGTGTT	NA	False	NA	-10	True	ATTAAA	-24	NA	65225613	65197778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148_65218176_65218488_65218572_65220786_65220858_65225463
ES.663.5	chr1	-	2334	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	-53	2	-32	-2	multi-exon	FALSE	canonical	3	72	junction_8	288.761904516506	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTTATTATGTGTT	NA	False	NA	-10	True	ATTAAA	-24	NA	65225691	65197778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ES.663.6	chr1	-	2293	9	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	391.129773860288	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225634	65197780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204429_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ES.663.8	chr1	-	2206	9	NNC	ENSMUSG00000025950.17	novel	2302	9	NA	NA	108	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	312.397558209087	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65218232	65197780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204429_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ES.663.9	chr1	-	2427	11	NNC	ENSMUSG00000025950.17	novel	2283	9	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	414.013236503376	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGTTTATTATGTG	NA	False	NA	-12	True	ATTAAA	-22	NA	65225627	65197780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65220786_65220858_65225019_65225108_65225463
ES.6630.1	chr11	-	171	2	Intergenic	novelGene_5336	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATCAGGACCTCCG	9030	False	NA	NA	False	NA	NA	NA	106742082	106700870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106700931_106741971
ES.6630.10	chr11	-	5380	19	FSM	ENSMUSG00002076856.1_ENSMUSG00000018363.17	ENSMUST00000092517.9	3125	19	-295	-1960	-4	1	multi-exon	FALSE	canonical	3	28	junction_17	7.74038631121946	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACTGAGTTTTTACTT	NA	False	NA	-5	True	AATAAA	-40	NA	106811591	106710890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.11	chr11	-	4391	14	NIC	ENSMUSG00000018363.17	novel	5290	18	NA	NA	-25479	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.0088729279003	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106755603	106710891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106713591_106713845_106713922_106715434_106715637_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537
ES.6630.12	chr11	-	4931	20	NNC	ENSMUSG00000018363.17	novel	2358	20	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	15.3086436576569	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106811090	106710891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106789489_106789543_106811006
ES.6630.17	chr11	-	5126	18	Fusion	ENSMUSG00002076856.1_ENSMUSG00000018363.17	novel	3125	19	NA	NA	-17	-18	intron_retention	FALSE	canonical	0	0	junction_2	12.5099268541504	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAGCGAGGTTTGTAA	NA	False	NA	-24	True	AATAAA	-21	NA	106811558	106710909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_106713591_106713845_106713922_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.18	chr11	-	3893	10	NIC	ENSMUSG00000018363.17	novel	5290	18	NA	NA	-13280	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	15.9451219368259	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCAGCGAGGTTTGTA	8828	False	NA	-25	True	AATAAA	-20	NA	106743404	106710910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272
ES.6630.19	chr11	-	5505	6	ISM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	84683	19	3266	-19	3prime_fragment	FALSE	canonical	3	44	junction_4	4.45421149026402	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCAGCGAGGTTTGTA	9644	False	NA	-25	True	AATAAA	-20	NA	106726858	106710910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570
ES.6630.2	chr11	-	5455	20	Fusion	ENSMUSG00002076856.1_ENSMUSG00000018363.17	novel	2358	20	NA	NA	-9	5	intron_retention	FALSE	canonical	3	9	junction_16	13.0135237562321	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGTTTTTACTTGTTT	NA	False	NA	-1	True	AATAAA	-44	NA	106811550	106710886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106766726_106766766_106811006
ES.6630.20	chr11	-	3254	19	FSM	ENSMUSG00002076856.1_ENSMUSG00000018363.17	ENSMUST00000092517.9	3125	19	-280	151	11	-151	multi-exon	FALSE	canonical	3	28	junction_17	7.74038631121946	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGCTAAAGAGGGATCA	NA	False	NA	NA	False	AATAAA	-31	NA	106811576	106713001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.21	chr11	-	2322	5	ISM	ENSMUSG00000018363.17	ENSMUST00000139297.8	2957	19	88018	155	-3251	-155	3prime_fragment	FALSE	canonical	3	44	junction_4	3.96074487943871	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTGGCTAAAGAGGG	9467	False	NA	NA	False	AATAAA	-27	NA	106723083	106713005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745
ES.6630.22	chr11	-	3056	19	NNC	ENSMUSG00000018363.17	novel	3125	19	NA	NA	-10	-155	intron_retention	FALSE	canonical	1	1	junction_2	12.0744859052691	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTGGCTAAAGAGGG	NA	False	NA	NA	False	AATAAA	-27	NA	106811306	106713005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106713591_106713845_106713922_106715358_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.23	chr11	-	3153	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	14	2123	14	-164	multi-exon	FALSE	canonical	2	5	junction_17	11.382314941417	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTTGTAAACAATTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	106811527	106713014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
ES.6630.24	chr11	-	4123	10	NIC	ENSMUSG00000018363.17	novel	5290	18	NA	NA	-25463	-294	intron_retention	FALSE	canonical	3	36	junction_8	6.07565471755214	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCAGGATATCAATATAG	NA	False	NA	NA	False	NA	NA	NA	106755587	106721707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537
ES.6630.25	chr11	-	4857	1	NIC	ENSMUSG00000018363.17	novel	5290	18	NA	NA	3560	-294	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCAGGATATCAATATAG	9938	False	NA	NA	False	NA	NA	NA	106726564	106721707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106721700_106726600
ES.6630.26	chr11	-	852	6	ISM	ENSMUSG00000018363.17	ENSMUST00000167787.2	2358	20	74273	8291	-6788	-316	internal_fragment	FALSE	canonical	3	37	junction_2	7.39188744503053	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	106736912	106721729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808
ES.6630.27	chr11	-	213	1	Intergenic	novelGene_5338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACATTTATATTTTGG	9027	False	NA	NA	False	AATATA	-5	NA	106742085	106741872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106741900_106742100
ES.6630.28	chr11	-	137	1	Intergenic	novelGene_5340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATACATCTT	NA	False	NA	NA	False	NA	NA	NA	106761031	106760894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106760900_106761000
ES.6630.29	chr11	-	2084	1	Intergenic	novelGene_5341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106806841	106804757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106804800_106806800
ES.6630.3	chr11	-	5328	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	-33	-5	-33	5	multi-exon	FALSE	canonical	2	5	junction_17	11.382314941417	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGTTTTTACTTGTTT	NA	False	NA	-1	True	AATAAA	-44	NA	106811574	106710886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
ES.6630.4	chr11	-	4897	17	NIC	ENSMUSG00000018363.17	novel	3125	19	NA	NA	73	5	intron_retention	TRUE	canonical	0	0	junction_4	12.4923414038362	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGTTTTTACTTGTTT	NA	False	NA	-1	True	AATAAA	-44	NA	106811028	106710886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.5	chr11	-	6265	1	Genic_Genomic	ENSMUSG00000018363.17	novel	NA	NA	NA	NA	2679	3	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAGTTTTTACTTGT	8114	False	NA	-3	True	AATAAA	-42	NA	106717153	106710888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_106710900_106717200
ES.6630.6	chr11	-	5274	5	ISM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	87623	-3	-4086	3	3prime_fragment	FALSE	canonical	3	44	junction_4	3.96074487943871	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAGTTTTTACTTGT	8632	False	NA	-3	True	AATAAA	-42	NA	106723918	106710888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745
ES.6630.7	chr11	-	4680	17	NIC	ENSMUSG00000018363.17	novel	3125	19	NA	NA	-27	3	intron_retention	FALSE	canonical	0	0	junction_2	12.8572389629345	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAGTTTTTACTTGT	NA	False	NA	-3	True	AATAAA	-42	NA	106811212	106710888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106713591_106713845_106713922_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ES.6630.8	chr11	-	4230	16	NNC	ENSMUSG00000018363.17	novel	2957	19	NA	NA	39	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.1883681598923	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAGTTTTTACTTGT	NA	False	NA	-3	True	AATAAA	-42	NA	106811062	106710888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724648_106740632_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106766726_106766766_106811006
ES.6630.9	chr11	-	5404	19	Fusion	ENSMUSG00002076856.1_ENSMUSG00000018363.17	novel	3125	19	NA	NA	1	3	intron_retention	FALSE	canonical	2	5	junction_18	15.3555595754939	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGAGTTTTTACTTGT	NA	False	NA	-3	True	AATAAA	-42	NA	106811540	106710888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106811006
ES.6631.1	chr11	+	155	1	Intergenic	novelGene_5342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATATAATAATATAAT	NA	False	NA	NA	False	NA	NA	NA	106814590	106814745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106814600_106814700
ES.6632.1	chr11	+	173	1	Intergenic	novelGene_5343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAAGCC	NA	False	NA	NA	False	NA	NA	NA	106821993	106822166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106822000_106822200
ES.6633.1	chr11	-	210	1	Intergenic	novelGene_5344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATAGTTGAGATTCAT	NA	False	NA	NA	False	NA	NA	NA	106842802	106842592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106842600_106842800
ES.6634.1	chr11	-	158	1	Intergenic	novelGene_5345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106854472	106854314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106854300_106854500
ES.6635.1	chr11	+	182	1	Intergenic	novelGene_5346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACACCCATAAACATA	NA	False	NA	NA	False	NA	NA	NA	106854699	106854881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106854700_106854900
ES.6636.1	chr11	+	179	1	Intergenic	novelGene_5347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106876477	106876656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106876500_106876700
ES.6637.1	chr11	+	229	1	Intergenic	novelGene_5348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAACAAACAAAACTG	NA	False	NA	NA	False	NA	NA	NA	106884575	106884804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106884600_106884800
ES.6637.10	chr11	+	5479	1	Antisense	novelGene_ENSMUSG00000040481.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGTGAACTAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	106931134	106936613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106931100_106936600
ES.6637.11	chr11	+	4582	11	Antisense	novelGene_ENSMUSG00000040481.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGGGGGGAGCGGAAG	NA	False	NA	NA	False	NA	NA	NA	106964260	107022770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106965819_106967349_106967528_106968485_106968623_106969341_106969471_106971537_106971680_106972040_106972395_106973335_106973529_106985829_106986017_106986541_106986754_107001640_107002464_107022101
ES.6637.12	chr11	+	208	1	Intergenic	novelGene_5359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTATGGGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	106988433	106988641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106988400_106988600
ES.6637.13	chr11	+	177	1	Intergenic	novelGene_5363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACACCAAACCC	NA	False	NA	NA	False	NA	NA	NA	107009865	107010042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107009900_107010000
ES.6637.14	chr11	+	328	1	Intergenic	novelGene_5364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTAACTTCCTCCACT	7239	False	NA	NA	False	AAAAAG	-41	NA	107020142	107020470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107020100_107020500
ES.6637.15	chr11	+	215	1	Intergenic	novelGene_5365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGGTTTTTTTGAG	2182	False	NA	NA	False	AATAAA	-17	NA	107024921	107025136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107024900_107025100
ES.6637.16	chr11	+	178	1	Intergenic	novelGene_5366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	2580	False	NA	NA	False	NA	NA	NA	107025319	107025497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107025300_107025500
ES.6637.17	chr11	+	179	2	Intergenic	novelGene_5367	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAGAAGG	2580	False	NA	NA	False	NA	NA	NA	107025319	107096493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107025467_107096461
ES.6637.18	chr11	+	209	1	Intergenic	novelGene_5369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAGAAGAATTTA	3817	False	NA	NA	False	NA	NA	NA	107029878	107030087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107029900_107030100
ES.6637.19	chr11	+	192	1	Intergenic	novelGene_5370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	6576	False	NA	NA	False	NA	NA	NA	107032637	107032829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107032600_107032800
ES.6637.2	chr11	+	175	2	Antisense	novelGene_ENSMUSG00000083356.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	106884577	106988612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106884627_106988486
ES.6637.20	chr11	+	425	1	Intergenic	novelGene_5371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCCAGCAACCACATG	6577	False	NA	NA	False	NA	NA	NA	107032638	107033063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107032600_107033100
ES.6637.21	chr11	+	184	1	Intergenic	novelGene_5372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAGAAAGAACGAA	8585	False	NA	NA	False	NA	NA	NA	107034646	107034830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107034600_107034800
ES.6637.22	chr11	+	153	1	Intergenic	novelGene_5373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTTTATTCCCCAAGT	8954	False	NA	NA	False	NA	NA	NA	107035015	107035168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107035000_107035200
ES.6637.23	chr11	+	171	1	Intergenic	novelGene_5375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107043174	107043345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107043200_107043300
ES.6637.24	chr11	+	176	1	Intergenic	novelGene_5377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACACTTG	NA	False	NA	NA	False	NA	NA	NA	107046787	107046963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107046800_107047000
ES.6637.25	chr11	+	147	1	Intergenic	novelGene_5378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAACCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	107053110	107053257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107053100_107053300
ES.6637.26	chr11	+	178	1	Intergenic	novelGene_5380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTGA	NA	False	NA	NA	False	NA	NA	NA	107078623	107078801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107078600_107078800
ES.6637.27	chr11	+	164	1	Intergenic	novelGene_5381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGGTTGAG	NA	False	NA	NA	False	NA	NA	NA	107096334	107096498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107096300_107096500
ES.6637.3	chr11	+	177	2	Antisense	novelGene_ENSMUSG00000083356.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATGTATATCACCACA	NA	False	NA	NA	False	NA	NA	NA	106884577	107038203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106884723_107038171
ES.6637.4	chr11	+	2278	1	Antisense	novelGene_ENSMUSG00000018362.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	106886310	106888588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_106886300_106888600
ES.6637.5	chr11	+	108	1	Intergenic	novelGene_5349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	106891179	106891287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106891200_106891300
ES.6637.6	chr11	+	232	1	Intergenic	novelGene_5350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCCACAGCAGCAGGGA	NA	False	NA	NA	False	AAAAAG	-8	NA	106895892	106896124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106895900_106896100
ES.6637.7	chr11	+	175	1	Intergenic	novelGene_5355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106909836	106910011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106909800_106910000
ES.6637.8	chr11	+	306	1	Intergenic	novelGene_5356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106910779	106911085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_106910800_106911100
ES.6637.9	chr11	+	2176	2	ISM	ENSMUSG00000078607.7	ENSMUST00000140447.4	1677	5	2485	0	-57	0	intron_retention	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCACCTGGCTTTGCT	NA	False	NA	NA	False	AGTAAA	-16	NA	106918991	106921264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_106919095_106919191
ES.6638.1	chr11	-	2111	12	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1223.74569955938	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTTTCTTAATTGAG	9744	False	NA	NA	False	AATAAA	-28	NA	106890289	106879453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106888930_106889065_106890184
ES.6638.10	chr11	-	2713	11	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	163	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	984.694678567931	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGCTGTTTTCTTAATT	10001	False	NA	NA	False	AATAAA	-25	NA	106890032	106879456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106889188
ES.6638.12	chr11	-	7167	7	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-3	intron_retention	FALSE	non_canonical	0	0	junction_4	1185.50139416011	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGTTTTCTTAAT	9745	False	NA	NA	False	AATAAA	-24	NA	106890288	106879457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106881198_106881464_106881699_106881894_106884571_106884813_106887473_106888063_106888162_106890184
ES.6638.13	chr11	-	6025	10	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-11	-3	intron_retention	FALSE	canonical	0	0	junction_7	1014.85970568459	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTGTTTTCTTAAT	9746	False	NA	NA	False	AATAAA	-24	NA	106890287	106879457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106884579_106884817_106887473_106888063_106888162_106890184
ES.6638.15	chr11	-	1914	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	44	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	1014.85970568459	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9710	False	NA	NA	False	AATAAA	-20	NA	106890323	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106887334_106887473_106888063_106888162_106890184
ES.6638.16	chr11	-	3427	9	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-2105	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	1073.60012778269	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	106885558	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106884564_106884805
ES.6638.17	chr11	-	2588	8	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-7	intron_retention	FALSE	canonical	3	2432	junction_7	276.768524811855	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9745	False	NA	NA	False	AATAAA	-20	NA	106890288	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106880300_106881014_106881198_106881464_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.18	chr11	-	3992	10	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	78	7	-13	-7	intron_retention	FALSE	canonical	3	2002	junction_5	396.290578013435	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9744	False	NA	NA	False	AATAAA	-20	NA	106890289	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063
ES.6638.19	chr11	-	4336	9	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-7	intron_retention	FALSE	canonical	3	2002	junction_4	392.891981815613	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9744	False	NA	NA	False	AATAAA	-20	NA	106890289	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063
ES.6638.2	chr11	-	2401	9	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	1	intron_retention	FALSE	canonical	3	2432	junction_8	262.746996890545	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTTTCTTAATTGAG	9744	False	NA	NA	False	AATAAA	-28	NA	106890289	106879453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.20	chr11	-	5623	10	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_7	1001.72907305442	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9744	False	NA	NA	False	AATAAA	-20	NA	106890289	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106884571_106884813_106887473_106888063_106888162_106890184
ES.6638.21	chr11	-	1959	9	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-7	intron_retention	FALSE	canonical	0	0	junction_6	1052.61649444373	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9745	False	NA	NA	False	AATAAA	-20	NA	106890288	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106887334_106887473_106888063_106888162_106890184
ES.6638.22	chr11	-	1996	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-44	-7	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	949.47438617374	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9713	False	NA	NA	False	AATAAA	-20	NA	106890320	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879802_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.23	chr11	-	5544	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	974.798933113901	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9745	False	NA	NA	False	AATAAA	-20	NA	106890288	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106884565_106884805_106887473_106888063_106888162_106890184
ES.6638.24	chr11	-	3785	3	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-465	-7	intron_retention	FALSE	canonical	3	2919	junction_1	96	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	106883918	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106881699_106881894_106882953_106883428
ES.6638.25	chr11	-	2235	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-7	intron_retention	FALSE	canonical	3	2002	junction_4	417.172492967704	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	9745	False	NA	NA	False	AATAAA	-20	NA	106890288	106879461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.26	chr11	-	2717	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	44	-8	intron_retention	FALSE	canonical	3	2002	junction_4	434.198054598686	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9710	False	NA	NA	False	AATAAA	-19	NA	106890323	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.27	chr11	-	2046	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-11	-8	intron_retention	FALSE	canonical	3	2432	junction_9	276.995431615401	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9746	False	NA	NA	False	AATAAA	-19	NA	106890287	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.28	chr11	-	2027	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	138	junction_9	963.091678007298	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9744	False	NA	NA	False	AATAAA	-19	NA	106890289	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888141_106890184
ES.6638.30	chr11	-	3030	8	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	2432	junction_7	288.038687877663	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9744	False	NA	NA	False	AATAAA	-19	NA	106890289	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.31	chr11	-	2311	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-8	intron_retention	FALSE	canonical	3	2002	junction_4	409.014835675271	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9745	False	NA	NA	False	AATAAA	-19	NA	106890288	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.32	chr11	-	3026	9	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-8	intron_retention	FALSE	canonical	3	2002	junction_3	423.867830225414	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9745	False	NA	NA	False	AATAAA	-19	NA	106890288	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.33	chr11	-	3293	10	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-2136	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1305.12655835874	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	106885589	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106883680_106884571_106884813
ES.6638.34	chr11	-	5541	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	974.798933113901	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9745	False	NA	NA	False	AATAAA	-19	NA	106890288	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106884571_106884813_106887473_106888063_106888162_106890184
ES.6638.35	chr11	-	2558	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-8	intron_retention	FALSE	canonical	3	2002	junction_5	436.276953605062	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	9745	False	NA	NA	False	AATAAA	-19	NA	106890288	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106888162_106890184
ES.6638.36	chr11	-	4486	6	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-1840	-8	intron_retention	FALSE	non_canonical	0	0	junction_5	1168.08105883111	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGACTTGCTGTTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	106885293	106879462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106884571_106884813
ES.6638.37	chr11	-	7743	6	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-9	-9	intron_retention	FALSE	non_canonical	0	0	junction_4	1206.27499352345	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGACTTGCTGTTTT	9748	False	NA	NA	False	AATAAA	-18	NA	106890285	106879463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106881198_106881464_106881699_106881894_106882334_106882683_106884571_106884813_106888162_106890184
ES.6638.38	chr11	-	6083	4	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-2882	-9	intron_retention	FALSE	non_canonical	0	0	junction_3	1388.6905902884	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGACTTGCTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	106886335	106879463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106881699_106881894_106882334_106882683_106884571_106884813
ES.6638.4	chr11	-	2150	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	-97	1	-97	-1	multi-exon	FALSE	canonical	3	2002	junction_5	417.039386629129	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9569	False	NA	NA	False	AATAAA	-26	NA	106890464	106879455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.41	chr11	-	3571	5	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-1071	-10	intron_retention	FALSE	canonical	3	2002	junction_3	540.09646129187	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTCTGACTTGCTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	106884524	106879464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106879806_106880149_106880300_106881014_106882159_106882238_106882334_106882683
ES.6638.42	chr11	-	1950	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	984.765967121123	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTACTCTGACTTGCT	9744	False	NA	NA	False	AATAAA	-13	NA	106890289	106879468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882322_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.43	chr11	-	7269	6	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-12	-14	intron_retention	FALSE	non_canonical	0	0	junction_3	1239.47466291167	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTACTCTGACTTGCT	9745	False	NA	NA	False	AATAAA	-13	NA	106890288	106879468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106882334_106882683_106884571_106884813_106887473_106888063_106888162_106890184
ES.6638.44	chr11	-	1878	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	984.694678567931	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCTGTCCTCTGAAT	9744	False	NA	NA	False	TATAAA	-13	NA	106890289	106879546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890190
ES.6638.5	chr11	-	6025	10	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	1014.85970568459	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9744	False	NA	NA	False	AATAAA	-26	NA	106890289	106879455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106884571_106884813_106887473_106888063_106888162_106890184
ES.6638.6	chr11	-	3114	8	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	2432	junction_7	275.82677202053	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9744	False	NA	NA	False	AATAAA	-26	NA	106890289	106879455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ES.6638.8	chr11	-	5528	11	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	1235.0460558214	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9744	False	NA	NA	False	AATAAA	-26	NA	106890289	106879455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106884571_106884813_106887473_106888063_106888141_106890184
ES.6638.9	chr11	-	6223	9	NNC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	-14	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	1305.45009000727	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	9743	False	NA	NA	False	AATAAA	-26	NA	106890290	106879455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882953_106883428_106884571_106884813_106887473_106888063_106888141_106890184
ES.6639.1	chr11	-	131	1	Intergenic	novelGene_5351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGACAAACAAAACAAAAA	9440	False	NA	NA	False	NA	NA	NA	106904189	106904058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106904100_106904200
ES.664.1	chr1	+	9543	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-109	-2793	-42	-1890	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGATCTCTTTGAGGA	NA	False	NA	30	True	AATAAA	-40	NA	65225799	65315964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.10	chr1	+	9484	43	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-8	-1896	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	21.5950149618335	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGATTTCAGATCTCTT	NA	False	NA	24	True	AATAAA	-34	NA	65225833	65315958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65231689_65231726_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.11	chr1	+	1597	8	NNC	ENSMUSG00000025949.17	novel	1303	8	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	38.3756938380405	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAGAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65225842	65248533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65247951
ES.664.12	chr1	+	1662	8	NIC	ENSMUSG00000025949.17	novel	1790	10	NA	NA	1	-25	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	36.7101164947923	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAGAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65225842	65248533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65247941
ES.664.14	chr1	+	9506	42	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	1	-1896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.9134653817415	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGATTTCAGATCTCTT	NA	False	NA	24	True	AATAAA	-34	NA	65225842	65315958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261416_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.15	chr1	+	4817	7	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	-9	16692	1	26	5prime_fragment	FALSE	canonical	3	73	junction_1	15.5536705207056	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTGTTCTTAGTTAT	NA	False	NA	NA	False	GATAAA	-9	NA	65225842	65248584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
ES.664.16	chr1	+	9276	41	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	1	-1891	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	18.3278306135778	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGATCTCTTTGAGG	NA	False	NA	29	True	AATAAA	-39	NA	65225842	65315963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.17	chr1	+	9575	43	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	1	-1895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	22.8773348312165	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225842	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65293391_65293472_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.18	chr1	+	6449	38	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	1	-3403	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	15.6665397422188	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65225842	65309768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031
ES.664.19	chr1	+	9479	42	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	3	-1891	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	19.5174078402918	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGATCTCTTTGAGG	NA	False	NA	29	True	AATAAA	-39	NA	65225844	65315963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262794_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.2	chr1	+	9477	42	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-34	-1893	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	16.2957131693522	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTTCAGATCTCTTTGA	NA	False	NA	27	True	AATAAA	-37	NA	65225807	65315961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.20	chr1	+	9390	41	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-1	-1900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.7648799675073	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACTAGATTTCAGATC	NA	False	NA	20	True	AATAAA	-30	NA	65225850	65315954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65241874_65242083_65244747_65244838_65255092_65255312_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.21	chr1	+	1326	8	NNC	ENSMUSG00000025949.17	novel	1303	8	NA	NA	0	23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	38.9814189121967	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATTTCAGCCCCGAGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	65225851	65245356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65245036
ES.664.22	chr1	+	9318	41	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	0	-1895	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	18.0099972237644	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225851	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.23	chr1	+	9345	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-57	-2647	0	-2036	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAATGTGTATATTTCTC	NA	False	NA	NA	False	AGTAAA	-14	NA	65225851	65315818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.24	chr1	+	9154	40	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	0	-1896	combination_of_known_splicesites	FALSE	canonical	2	2	junction_15	22.0483003350827	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGATTTCAGATCTCTT	NA	False	NA	24	True	AATAAA	-34	NA	65225851	65315958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.25	chr1	+	9624	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-57	-2926	0	-1757	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGCCCTCAGTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	65225851	65316097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.26	chr1	+	2254	2	ISM	ENSMUSG00000025949.17	ENSMUST00000185263.7	443	4	-19	-245	0	-51	intron_retention	FALSE	canonical	3	73	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTGTTGAAAAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	65225852	65231591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65225993_65229477
ES.664.27	chr1	+	9388	43	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	1	-1896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.2223333530671	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGATTTCAGATCTCTT	NA	False	NA	24	True	AATAAA	-34	NA	65225853	65315958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225938_65229597_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65293391_65293472_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.28	chr1	+	1897	8	NIC	ENSMUSG00000025949.17	novel	4266	13	NA	NA	1	564	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	21.9795823621907	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCACAGCTGTATGTCCT	NA	False	NA	NA	False	AATAAA	-15	NA	65225853	65255985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092
ES.664.29	chr1	+	1531	7	FSM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	13	-500	0	32	multi-exon	FALSE	canonical	3	56	junction_1	20.9257948209593	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCGAGTTTGATTATTT	NA	False	NA	NA	False	ATTAAA	-30	NA	65225854	65245365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
ES.664.3	chr1	+	9376	42	NNC	ENSMUSG00000025949.17	novel	3277	19	NA	NA	-32	-1889	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	22.7212631717292	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATCTCTTTGAGGAA	NA	False	NA	31	True	AATAAA	-41	NA	65225809	65315965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225853_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262794_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.31	chr1	+	9383	42	NNC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	0	-1899	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	24.3993397673521	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTAGATTTCAGATCT	NA	False	NA	21	True	AATAAA	-31	NA	65225862	65315955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65293391_65293472_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.32	chr1	+	2031	13	NIC	ENSMUSG00000025949.17	novel	4266	13	NA	NA	-4	-2175	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	22.7050838653667	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTGTTTTATTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	65225867	65270268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952
ES.664.33	chr1	+	9422	42	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	0	-1895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	23.2379000772445	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225871	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292520_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304954_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.34	chr1	+	4498	16	NNC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	0	5007	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	31.6379518932563	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGAAGAACTTGC	NA	False	NA	NA	False	AATAAA	-27	NA	65225871	65277450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274735_65275432
ES.664.35	chr1	+	584	3	ISM	ENSMUSG00000025949.17	ENSMUST00000213081.2	1790	10	10	16972	1	-56	5prime_fragment	FALSE	canonical	3	73	junction_1	14.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTCAGTTGTTGAA	NA	False	NA	NA	False	AATAAA	-20	NA	65225872	65231586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65225993_65229477_65229659_65231303
ES.664.36	chr1	+	1601	8	ISM	ENSMUSG00000025949.17	ENSMUST00000081154.14	11237	42	12	72489	1	32	5prime_fragment	FALSE	canonical	1	2	junction_3	44.7783657675928	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCGAGTTTGATTATTT	NA	False	NA	NA	False	ATTAAA	-30	NA	65225872	65245365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65231692_65231726_65234814_65234934_65235770_65235943_65241874_65242083_65244747
ES.664.37	chr1	+	6703	38	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	1	-1660	combination_of_known_junctions	FALSE	canonical	3	18	junction_11	17.7185198576502	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTAACTACAAGGGATCT	NA	False	NA	NA	False	AATAAA	-21	NA	65225872	65311511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426
ES.664.38	chr1	+	12432	41	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	2	-1894	intron_retention	FALSE	canonical	3	51	junction_11	16.0442941571139	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTTCAGATCTCTTTG	NA	False	NA	26	True	AATAAA	-36	NA	65225873	65315960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.39	chr1	+	1707	9	NIC	ENSMUSG00000025949.17	novel	1790	10	NA	NA	13	-25	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	43.4940728720592	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAAGAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65225884	65248533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65247642_65247730_65247941
ES.664.4	chr1	+	9131	40	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	-30	-1895	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	20.4013316397698	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225811	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.41	chr1	+	2738	2	NNC	ENSMUSG00000025949.17	novel	1044	7	NA	NA	6165	1419	intron_retention	FALSE	canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAAACTGACAAGCT	NA	False	NA	NA	False	NA	NA	NA	65242083	65246752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65242817_65244747
ES.664.42	chr1	+	8140	34	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	8843	-2013	combination_of_known_splicesites	FALSE	canonical	1	3	junction_33	18.0805259274864	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTCCAGCTGTTTTA	NA	False	NA	-93	True	AGTAAA	-37	NA	65244761	65315841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312801
ES.664.43	chr1	+	4196	19	ISM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	58994	4185	48984	-4185	internal_fragment	FALSE	canonical	3	62	junction_1	8.45339437996417	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGTGTACTGTGATAA	NA	False	NA	NA	False	AATAAA	-38	NA	65284902	65308986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856
ES.664.44	chr1	+	5610	21	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	53458	-1890	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	21.3711838698749	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGATCTCTTTGAGGA	NA	False	NA	30	True	AATAAA	-40	NA	65289376	65315964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.45	chr1	+	6630	19	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	55652	-1891	intron_retention	FALSE	canonical	3	62	junction_7	12.8674390480127	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGATCTCTTTGAGG	NA	False	NA	29	True	AATAAA	-39	NA	65291570	65315963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.46	chr1	+	4731	14	ISM	ENSMUSG00000025949.17	ENSMUST00000081154.14	11237	42	71205	1894	61147	-1894	3prime_fragment	FALSE	canonical	3	62	junction_1	13.1944941000484	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTTCAGATCTCTTTG	NA	False	NA	26	True	AATAAA	-36	NA	65297065	65315960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.47	chr1	+	5816	9	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	66877	-1913	intron_retention	FALSE	canonical	3	67	junction_1	12.7867118525444	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATTTACTTACTCTAC	NA	False	NA	7	True	AATAAA	-17	NA	65302795	65315941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65303590_65304407_65304506_65304920_65305086_65306984_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.48	chr1	+	6505	9	NIC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	67293	-1895	intron_retention	FALSE	canonical	3	67	junction_1	12.0461352723602	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65303211	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65303590_65304407_65304506_65304920_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.49	chr1	+	3048	1	ISM	ENSMUSG00000025949.17	ENSMUST00000081154.14	11237	42	88945	1	78887	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTAATGTGTCTGTTT	3350	False	NA	NA	False	AATAAA	-25	NA	65314805	65317853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_65314800_65317900
ES.664.5	chr1	+	4790	7	FSM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	-30	-3716	-30	23	multi-exon	FALSE	canonical	3	56	junction_1	20.9257948209593	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCAGTGTTCTTAGT	NA	False	NA	NA	False	GATAAA	-6	NA	65225811	65248581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
ES.664.6	chr1	+	6012	35	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-25	-7575	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	15.7937616347213	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGGCCATGTGCATTTA	NA	False	NA	NA	False	NA	NA	NA	65225816	65305596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920
ES.664.7	chr1	+	9343	42	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-25	-1895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0233950021532	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225816	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225935_65229597_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ES.664.8	chr1	+	9377	42	NNC	ENSMUSG00000025949.17	novel	11237	42	NA	NA	-22	21310	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	21.501988619071	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAGAAACACAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	65225819	65339164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801_65315954_65339131
ES.664.9	chr1	+	9770	43	NNC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	-12	-1895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.3954327495152	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCAGATCTCTTT	NA	False	NA	25	True	AATAAA	-35	NA	65225829	65315959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65293171_65293472_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311588_65311868_65312191_65312267_65312801
ES.6640.1	chr11	-	164	1	Intergenic	novelGene_5352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAGAAAGAAGGA	8483	False	NA	NA	False	NA	NA	NA	106905146	106904982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106905000_106905100
ES.6641.1	chr11	-	468	1	Intergenic	novelGene_5353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAACAAAAAACCCC	6822	False	NA	NA	False	NA	NA	NA	106906807	106906339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106906300_106906800
ES.6641.2	chr11	-	225	1	Intergenic	novelGene_5354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGCTGAGGATTGACC	6820	False	NA	NA	False	NA	NA	NA	106906809	106906584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106906600_106906800
ES.6642.1	chr11	-	217	1	Intergenic	novelGene_5357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAGGAAAAAAAATAGC	6067	False	NA	NA	False	NA	NA	NA	106914641	106914424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106914400_106914600
ES.6643.1	chr11	-	6625	19	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6178	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	13.2587031747657	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCAGGTCAGATC	8923	False	NA	-6	True	AATAAA	-22	NA	106964209	106923906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.10	chr11	-	7089	24	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-14126	476	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_20	17.3217085733972	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCGCTGTGATTACCT	975	False	NA	4	True	AATAAA	-39	NA	106972157	106925746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041
ES.6643.11	chr11	-	6409	18	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	57129	1851	-7588	465	3prime_fragment	FALSE	canonical	3	17	junction_7	16.2621261649529	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCTTTGAATGTGCGC	7513	False	NA	-7	True	AATAAA	-28	NA	106965619	106925757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.12	chr11	-	3214	9	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-1829	464	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	24.3092060750655	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTCTTTGAATGTGCG	NA	False	NA	-8	True	AATAAA	-27	NA	106945545	106925758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281
ES.6643.13	chr11	-	9141	28	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	20658	463	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	20.2362588647088	361	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCTCTTTGAATGTGC	NA	False	NA	-9	True	AATAAA	-26	NA	107002090	106925759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541_106986752_106990391_106990616_107001638
ES.6643.14	chr11	-	5219	18	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6741	462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.527450876636	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTCTCTTTGAATGTG	8360	False	NA	-10	True	AATAAA	-25	NA	106964772	106925760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106937989_106943773_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.15	chr11	-	2856	8	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-2048	459	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.4624224853092	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGTCTCTTTGAAT	NA	False	NA	-13	True	AATAAA	-22	NA	106945764	106925763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106927417_106931051_106931240_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680
ES.6643.16	chr11	-	4988	20	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6468	459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.4514760585029	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGTCTCTTTGAAT	8633	False	NA	-13	True	AATAAA	-22	NA	106964499	106925763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934549_106934618_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.18	chr11	-	4829	1	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	3940	459	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGTCTCTTTGAAT	NA	False	NA	-13	True	AATAAA	-22	NA	106930592	106925763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106925800_106930600
ES.6643.20	chr11	-	4587	18	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6177	459	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	18.5520869660491	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAGGTCTCTTTGAAT	8924	False	NA	-13	True	AATAAA	-22	NA	106964208	106925763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959220_106963508
ES.6643.21	chr11	-	5321	19	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6728	458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	17.9241371161355	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGGAGGTCTCTTTGAA	8373	False	NA	-14	True	AATAAA	-21	NA	106964759	106925764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956489_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.24	chr11	-	5282	16	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-1139	457	intron_retention	FALSE	canonical	0	0	junction_4	18.9717919261436	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGGAGGTCTCTTTGA	NA	False	NA	-15	True	AATAAA	-20	NA	106959170	106925765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934549_106937825_106938170_106943614_106943841_106944048_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100
ES.6643.25	chr11	-	7596	24	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-14368	457	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.8566668867537	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGGAGGTCTCTTTGA	733	False	NA	-15	True	AATAAA	-20	NA	106972399	106925765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934549_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106952875_106953038_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041
ES.6643.26	chr11	-	4328	17	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6102	456	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.7279036466979	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATGGAGGTCTCTTTG	8999	False	NA	-16	True	AATAAA	-19	NA	106964133	106925766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.27	chr11	-	4588	18	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6206	438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	17.7590563669634	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATCATTTTTCTCCCA	8895	False	NA	-34	True	AATAAA	-1	NA	106964237	106925784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.28	chr11	-	8210	28	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	450	-6	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	21.0343634190447	400	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATACTATGGGGTC	NA	False	NA	NA	False	NA	NA	NA	107022298	106926335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ES.6643.29	chr11	-	7058	26	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-28642	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	19.1175730677301	311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATACTATGGGG	NA	False	NA	NA	False	NA	NA	NA	106986673	106926337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541
ES.6643.3	chr11	-	3944	8	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-2039	-6	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	16.2103519457192	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGTCCATCTGTGTCAG	NA	False	NA	-14	True	AATAAA	-14	NA	106945755	106923914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680
ES.6643.30	chr11	-	2241	7	NIC	ENSMUSG00000040481.18	novel	2177	6	NA	NA	-87	-18	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	23.6883703299507	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAGAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	106943803	106926347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614
ES.6643.31	chr11	-	8728	29	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	493	-18	combination_of_known_junctions	FALSE	canonical	3	7	junction_25	20.5576280593986	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAGAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	107022255	106926347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ES.6643.32	chr11	-	3592	19	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-5582	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	17.9241371161355	311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAGAAAAAAAAAAAAAGA	9519	False	NA	NA	False	NA	NA	NA	106963613	106926347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956489_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.33	chr11	-	4528	18	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-5955	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.1273941130211	311	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAGAAAAAAAAAAAAAGA	9146	False	NA	NA	False	NA	NA	NA	106963986	106926347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106927417_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946148_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.34	chr11	-	3184	11	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	6654	-18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	20.6409786589687	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAGAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	106951377	106926347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297
ES.6643.35	chr11	-	7863	28	NNC	ENSMUSG00000040481.18	novel	12036	30	NA	NA	32188	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.361670993963	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8932	False	NA	NA	False	NA	NA	NA	106990560	106926371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956489_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106985827_106986017_106986541_106986752_106990391
ES.6643.38	chr11	-	3604	18	NNC	ENSMUSG00000040481.18	novel	2177	6	NA	NA	-1120	-574	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	15.8419966586124	306	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGATACATATATTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	106959151	106926903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100
ES.6643.39	chr11	-	2836	11	NIC	ENSMUSG00000040481.18	novel	2177	6	NA	NA	-5839	-737	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	22.1278105559497	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGATGTTAATGTTACT	NA	False	NA	NA	False	NA	NA	NA	106949555	106927066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459
ES.6643.4	chr11	-	8655	25	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-28710	-726	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_24	19.682197257646	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGCAGTTTCTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	106986741	106924634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106986541
ES.6643.40	chr11	-	2688	12	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	4584	3121	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	16.2312829269453	164	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAATGTGGTTAAAATGA	NA	False	NA	NA	False	NA	NA	NA	106953447	106930745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361
ES.6643.41	chr11	-	8087	25	NNC	ENSMUSG00000040481.18	novel	12036	30	NA	NA	20439	49	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	18.9537082270345	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTGTGTGGATAATTT	NA	False	NA	NA	False	AAAAAG	-28	NA	107002309	106933817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106985827_106986017_106986541_106986752_106990391_106990616_107001638
ES.6643.42	chr11	-	4740	16	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-6789	46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.4641023644372	302	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACCTTGTGTGGATAA	8312	False	NA	NA	False	AAAAAG	-25	NA	106964820	106933820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934549_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.43	chr11	-	6444	15	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-7740	30	intron_retention	FALSE	canonical	3	36	junction_5	11.3353339570728	302	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATCACCCAAAT	7361	False	NA	NA	False	AAAAAG	-9	NA	106965771	106933836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.44	chr11	-	8116	27	NNC	ENSMUSG00000040481.18	novel	12036	30	NA	NA	430	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.4512698351428	391	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATCACCCAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	107022318	106933836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106945927_106946058_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106985827_106986017_106986541_106986752_106990391_106990616_107001638_107002271_107022099
ES.6643.45	chr11	-	4405	16	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-5968	30	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	13.3456609677703	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATCACCCAAAT	9133	False	NA	NA	False	AAAAAG	-9	NA	106963999	106933836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.46	chr11	-	6727	21	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-15478	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	18.6134360073577	302	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATCACCCAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	106973509	106933836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969375_106969476_106971548_106971681_106972041_106972398_106973338
ES.6643.47	chr11	-	7692	26	NNC	ENSMUSG00000040481.18	novel	12036	30	NA	NA	20989	30	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_23	18.6072673974445	351	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATCACCCAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	107001759	106933836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106985827_106986017_106986541_106986752_106990391_106990616_107001638
ES.6643.48	chr11	-	4742	15	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	58175	9993	-6542	-33	internal_fragment	FALSE	canonical	3	17	junction_4	14.3749001771157	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATAAAATA	8559	False	NA	NA	False	NA	NA	NA	106964573	106933899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.49	chr11	-	2273	7	NNC	ENSMUSG00000040481.18	novel	11847	29	NA	NA	-9	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.1771501343756	391	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	107022757	106933899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106945717_107022099
ES.6643.5	chr11	-	4615	12	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	70197	729	5480	-727	3prime_fragment	FALSE	canonical	3	17	junction_7	19.2890154155799	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTGCAGTTTCTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	106952551	106924635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509
ES.6643.50	chr11	-	5000	14	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-5901	1718	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	17.8647118363013	292	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTATGTTTTTGTTTTTT	9200	False	NA	NA	False	ATTAAA	-16	NA	106963932	106935773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956535_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.51	chr11	-	5230	15	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-9341	37	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_14	13.5731201953248	291	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATTGCAAGTTAGT	5760	False	NA	NA	False	NA	NA	NA	106967372	106937454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347
ES.6643.52	chr11	-	3369	3	NNC	ENSMUSG00000040481.18	novel	780	2	NA	NA	1418	29	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	106942298	106937462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106939287_106940017_106940702_106941437
ES.6643.53	chr11	-	2836	3	NNC	ENSMUSG00000040481.18	novel	780	2	NA	NA	2161	29	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	106941555	106937462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106939287_106940017_106940859_106941384
ES.6643.54	chr11	-	7067	13	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-5372	29	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	11.6571389666971	291	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAAATTGC	9729	False	NA	NA	False	NA	NA	NA	106963403	106937462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100
ES.6643.55	chr11	-	2839	3	NNC	ENSMUSG00000040481.18	novel	780	2	NA	NA	2048	25	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106941668	106937466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106939287_106940017_106940806_106941437
ES.6643.57	chr11	-	3126	1	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-2451	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106940620	106937494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106937500_106940600
ES.6643.58	chr11	-	178	1	Intergenic	novelGene_5358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106955368	106955190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106955200_106955400
ES.6643.59	chr11	-	180	1	Intergenic	novelGene_5360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTTAAAAAAA	2559	False	NA	NA	False	NA	NA	NA	106996933	106996753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_106996800_106996900
ES.6643.6	chr11	-	4953	17	NNC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	61	-733	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	13.6826475416858	314	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGATTCTGTGCAGTT	NA	False	NA	NA	False	AATAAA	-13	NA	106957970	106924641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952
ES.6643.60	chr11	-	180	1	Intergenic	novelGene_5361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATTGATCTCTA	NA	False	NA	NA	False	NA	NA	NA	107000208	107000028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_1.07e+08_107000200
ES.6643.61	chr11	-	173	1	Intergenic	novelGene_5362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAATGAAAGAAAG	8539	False	NA	NA	False	NA	NA	NA	107007139	107006966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107007000_107007100
ES.6643.62	chr11	-	1048	1	Genic_Genomic	ENSMUSG00000040481.18	novel	NA	NA	NA	NA	-18	-70550	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAAAACAAAACTAGATT	NA	False	NA	NA	False	NA	NA	NA	107022971	107021923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_107021900_107023000
ES.6643.7	chr11	-	2777	6	ISM	ENSMUSG00000040481.18	ENSMUST00000057892.15	11488	28	78920	1005	-112	-1003	3prime_fragment	FALSE	canonical	3	30	junction_4	19.1143924831526	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCACGTTGTAGGCACT	NA	False	NA	NA	False	NA	NA	NA	106943828	106924911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614
ES.6643.8	chr11	-	6466	19	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	-7458	478	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	15.3329307515588	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCTGTGATTACCTGT	7643	False	NA	6	True	AATAAA	-41	NA	106965489	106925744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945281_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508
ES.6643.9	chr11	-	8898	29	NNC	ENSMUSG00000040481.18	novel	11847	29	NA	NA	534	476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	22.2355203974843	401	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCGCTGTGATTACCT	NA	False	NA	4	True	AATAAA	-39	NA	107022214	106925746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977721_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ES.6644.1	chr11	-	245	1	Intergenic	novelGene_5368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATCTCTCTCTGTAT	NA	False	NA	NA	False	ACTAAA	-17	NA	107026326	107026081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107026100_107026300
ES.6645.1	chr11	-	156	1	Intergenic	novelGene_5374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	107041695	107041539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107041500_107041700
ES.6646.1	chr11	-	156	1	Intergenic	novelGene_5376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	107044122	107043966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107044000_107044100
ES.6647.1	chr11	-	208	1	Intergenic	novelGene_5379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGCTCCCCCAATGAAG	NA	False	NA	NA	False	AAAAAG	-8	NA	107054328	107054120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107054100_107054300
ES.6648.1	chr11	-	4521	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	113	-1476	84	1476	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGCTTTGCCATGTG	1214	False	NA	NA	False	NA	NA	NA	107080094	107056012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.10	chr11	-	3127	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	52	-81	23	81	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCCTGTTGTCTTAGA	1153	False	NA	NA	False	GATAAA	-14	NA	107080155	107057407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.11	chr11	-	4663	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	24	42	intron_retention	FALSE	canonical	3	283	junction_13	59.5724349007156	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGAGCGAGTTCAGTG	1154	False	NA	NA	False	AAAAAG	-8	NA	107080154	107057446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.12	chr11	-	4094	16	NIC	ENSMUSG00000018433.15	novel	3098	18	NA	NA	82	6	intron_retention	FALSE	canonical	3	50	junction_5	116.381938270316	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATGTCTCTCTTTTTA	1212	False	NA	NA	False	TATAAA	-18	NA	107080096	107057482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069919_107070867_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.13	chr11	-	3016	19	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	72	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116.614869454018	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1202	False	NA	NA	False	TATAAA	-15	NA	107080106	107057485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059159_107059202_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.14	chr11	-	3842	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	3	intron_retention	FALSE	canonical	3	283	junction_13	61.0542791293125	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1214	False	NA	NA	False	TATAAA	-15	NA	107080094	107057485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.15	chr11	-	6639	15	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	85	3	intron_retention	FALSE	canonical	3	375	junction_7	46.9322133833599	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1215	False	NA	NA	False	TATAAA	-15	NA	107080093	107057485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107071928_107072564_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.16	chr11	-	3688	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	3	intron_retention	FALSE	canonical	3	283	junction_13	58.6112390566007	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1214	False	NA	NA	False	TATAAA	-15	NA	107080094	107057485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.17	chr11	-	3981	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	87	3	intron_retention	FALSE	canonical	3	283	junction_12	60.6654212326374	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	1217	False	NA	NA	False	TATAAA	-15	NA	107080091	107057485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.18	chr11	-	5843	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	0	intron_retention	FALSE	canonical	3	375	junction_7	46.6336073377702	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1214	False	NA	NA	False	TATAAA	-12	NA	107080094	107057488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.19	chr11	-	3081	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	119.99120498335	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1212	False	NA	NA	False	TATAAA	-12	NA	107080096	107057488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070979_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.2	chr11	-	3597	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	48	-547	19	547	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGGTGGTACATATCTT	1149	False	NA	NA	False	NA	NA	NA	107080159	107056941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.20	chr11	-	5045	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	62	0	intron_retention	FALSE	canonical	3	283	junction_12	60.4702314274461	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1192	False	NA	NA	False	TATAAA	-12	NA	107080116	107057488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.24	chr11	-	3015	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	116.723877882034	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1217	False	NA	NA	False	TATAAA	-12	NA	107080091	107057488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062493_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.27	chr11	-	2872	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	22	264	-7	-264	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAAAACATCTCTG	1123	False	NA	NA	False	NA	NA	NA	107080185	107057752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.28	chr11	-	2693	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	23	-264	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	117.959589876152	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTGCAAAACATCTCTG	1153	False	NA	NA	False	NA	NA	NA	107080155	107057752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107077460_107077518_107077634_107077749_107079942
ES.6648.29	chr11	-	4300	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	78	-267	intron_retention	FALSE	canonical	3	283	junction_13	59.5724349007156	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGCTGCAAAACATCT	1208	False	NA	NA	False	NA	NA	NA	107080100	107057755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.3	chr11	-	3683	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	22	-547	-7	547	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGGTGGTACATATCTT	1123	False	NA	NA	False	NA	NA	NA	107080185	107056941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.30	chr11	-	2801	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	29	268	0	-268	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGCTGCAAAACATC	1130	False	NA	NA	False	NA	NA	NA	107080178	107057756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.31	chr11	-	2705	18	NNC	ENSMUSG00000018433.15	novel	3098	18	NA	NA	86	-274	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	145.09703232295	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAGAAGCTGCAA	1216	False	NA	NA	False	NA	NA	NA	107080092	107057762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074449_107075561_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.34	chr11	-	2747	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	81	-274	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	116.723877882034	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAGAAGCTGCAA	1211	False	NA	NA	False	NA	NA	NA	107080097	107057762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062493_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.35	chr11	-	2673	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	89	-274	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	118.873817028814	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGAAGAAGCTGCAA	1219	False	NA	NA	False	NA	NA	NA	107080089	107057762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.37	chr11	-	2651	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	15	492	-14	205	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATAGTTTTTCTTTC	1116	False	NA	0	True	AGTAAA	-30	NA	107080192	107057980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.38	chr11	-	3346	17	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	204	intron_retention	FALSE	canonical	3	283	junction_13	61.0542791293125	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAATAGTTTTTCTTT	1214	False	NA	-1	True	AGTAAA	-29	NA	107080094	107057981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.4	chr11	-	3622	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	83	542	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	119.99120498335	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCGGTGGTGGTACAT	1213	False	NA	NA	False	NA	NA	NA	107080095	107056946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070979_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.40	chr11	-	2572	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	50	202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	119.094013632277	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGAATAGTTTTTCT	1180	False	NA	-3	True	AGTAAA	-27	NA	107080128	107057983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059204_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.41	chr11	-	3871	14	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	87	197	intron_retention	FALSE	canonical	0	0	junction_9	164.462042166603	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCATTTTGAATAGTT	1217	False	NA	-8	True	AGTAAA	-22	NA	107080091	107057988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071860_107071928_107072564_107072710_107077460_107077518_107077634_107077749_107079942
ES.6648.42	chr11	-	2483	18	NNC	ENSMUSG00000018433.15	novel	3098	18	NA	NA	84	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	145.09703232295	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGCATTTTGAATAGTT	1214	False	NA	-8	True	AGTAAA	-22	NA	107080094	107057988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075567_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.45	chr11	-	4489	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	195	intron_retention	FALSE	canonical	3	283	junction_12	57.6099528438157	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCATTTTGAATAG	1214	False	NA	-10	True	AGTAAA	-20	NA	107080094	107057990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.47	chr11	-	3166	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	119.094013632277	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAACGTATTTGTGTCT	1214	False	NA	-36	True	TTTAAA	-21	NA	107080094	107058016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059319_107061371_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.48	chr11	-	2490	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	169	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	116.723877882034	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAACGTATTTGTGTCT	1214	False	NA	-36	True	TTTAAA	-21	NA	107080094	107058016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062493_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.49	chr11	-	2341	17	NIC	ENSMUSG00000018433.15	novel	3098	18	NA	NA	50	168	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	148.365206079458	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAACGTATTTGTGTC	1180	False	NA	-37	True	TTTAAA	-20	NA	107080128	107058017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107077460_107077518_107077634_107077749_107079942
ES.6648.5	chr11	-	3555	18	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	89	530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	118.330105386712	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAAAAGCCAAGCG	1219	False	NA	NA	False	NA	NA	NA	107080089	107056958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077649_107077749_107079942
ES.6648.50	chr11	-	1896	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	-943	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	119.315194152109	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTTTGTGAAATCTCA	1214	False	NA	NA	False	AAAAAG	-17	NA	107080094	107059128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107077460_107077518_107077634_107077749_107079942
ES.6648.51	chr11	-	3185	16	ISM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	110	3205	81	-2508	5prime_fragment	FALSE	canonical	3	283	junction_12	59.6420433363356	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCCATGTGTTACATA	1211	False	NA	NA	False	AGTAAA	-18	NA	107080097	107060693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.6	chr11	-	3458	17	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	84	530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	120.00779597072	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGAAAAGCCAAGCG	1214	False	NA	NA	False	NA	NA	NA	107080094	107056958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058468_107061926_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.8	chr11	-	3471	17	NNC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	63	529	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.182440513577	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAGAAAAGCCAAGC	1193	False	NA	NA	False	NA	NA	NA	107080115	107056959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107058470_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6648.9	chr11	-	3249	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	-8	-83	-8	83	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTGTTGTCTTAGAGA	1093	False	NA	NA	False	GATAAA	-16	NA	107080215	107057405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ES.6649.1	chr11	-	197	1	Intergenic	novelGene_5382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107098371	107098174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107098200_107098400
ES.665.1	chr1	-	1723	1	Antisense	novelGene_ENSMUSG00000025949.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	65232149	65230426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_65230400_65232100
ES.665.2	chr1	-	1331	1	Antisense	novelGene_ENSMUSG00000025949.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAATGAAATTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	65232149	65230818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_65230800_65232100
ES.6650.1	chr11	+	4067	1	Antisense	novelGene_ENSMUSG00000040430.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	107099037	107103104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_107099000_107103100
ES.6650.2	chr11	+	1412	1	Antisense	novelGene_ENSMUSG00000040430.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCATCCATTTACCC	NA	False	NA	NA	False	NA	NA	NA	107101193	107102605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_107101200_107102600
ES.6651.1	chr11	+	984	1	Intergenic	novelGene_5383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107103806	107104790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107103800_107104800
ES.6652.1	chr11	+	829	1	Intergenic	novelGene_5388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTAAGGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	107178357	107179186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107178400_107179200
ES.6653.1	chr11	+	239	1	Intergenic	novelGene_5389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGGCATTTCGTACAT	NA	False	NA	NA	False	NA	NA	NA	107180069	107180308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107180100_107180300
ES.6654.1	chr11	+	1551	1	Intergenic	novelGene_5396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGACCAAAATAAGCCACA	NA	False	NA	NA	False	NA	NA	NA	107288385	107289936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107288400_107289900
ES.6655.1	chr11	+	158	1	Intergenic	novelGene_5397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTTTTATTTG	NA	False	NA	NA	False	NA	NA	NA	107294988	107295146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107295000_107295100
ES.6656.1	chr11	+	317	1	Intergenic	novelGene_5400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAGATTTAT	NA	False	NA	NA	False	NA	NA	NA	107332202	107332519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107332200_107332500
ES.6657.1	chr11	+	178	1	Intergenic	novelGene_5402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGTGATTTTCCGCT	8991	False	NA	NA	False	NA	NA	NA	107347028	107347206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107347000_107347200
ES.6658.1	chr11	+	134	1	Intergenic	novelGene_5403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCCAAAAAAAAAAAA	1519	False	NA	NA	False	NA	NA	NA	107354659	107354793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107354700_107354800
ES.6659.1	chr11	+	248	1	Intergenic	novelGene_5404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGATCATAGAAGGCC	3406	False	NA	NA	False	NA	NA	NA	107356546	107356794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107356500_107356800
ES.666.1	chr1	-	1792	3	Antisense	novelGene_ENSMUSG00000025946.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGTGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	65401269	65397988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_65399111_65400158_65400438_65400878
ES.6660.1	chr11	-	6375	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTAGCATCCTCTGTCTC	NA	False	NA	4	True	AATAAA	-22	NA	107361574	107098712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.11	chr11	-	1293	2	NNC	ENSMUSG00000040430.19	novel	5478	8	NA	NA	122221	-3542	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107106131	107102259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107103485_107106063
ES.6660.12	chr11	-	1989	9	NNC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-65	-3544	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.7508761538758	166	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCGCTTCCCCTTTTT	NA	False	NA	-4	True	AATAAA	-18	NA	107239021	107102261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107239000
ES.6660.14	chr11	-	2631	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-92	-3782	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107361617	107102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.15	chr11	-	2489	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-69	-3782	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107361594	107102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.16	chr11	-	3334	1	NIC	ENSMUSG00000040430.19	novel	5478	8	NA	NA	122519	-3782	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107105833	107102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107102500_107105800
ES.6660.17	chr11	-	2498	9	NNC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	59	-3782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.8862245271854	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107361466	107102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187115_107212412_107212502_107228237_107228387_107360716
ES.6660.18	chr11	-	2910	2	ISM	ENSMUSG00000040430.19	ENSMUST00000103064.10	6329	10	252097	3782	118924	-3782	3prime_fragment	FALSE	canonical	3	49	junction_1	0	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107109428	107102499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_107103485_107107503
ES.6660.19	chr11	-	1815	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	20	-4367	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGCCTCCTTCACT	NA	False	NA	NA	False	NA	NA	NA	107361505	107103084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.2	chr11	-	6213	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTGTAGCATCCTCT	NA	False	NA	-1	True	AATAAA	-17	NA	107361536	107098717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.20	chr11	-	219	1	Intergenic	novelGene_5384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTATATCTGAGAAAAG	8960	False	NA	NA	False	AAAACA	-22	NA	107123692	107123473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107123500_107123700
ES.6660.21	chr11	-	182	1	Intergenic	novelGene_5385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGCTAATAACCT	9529	False	NA	NA	False	NA	NA	NA	107128201	107128019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107128000_107128200
ES.6660.22	chr11	-	3213	1	Intergenic	novelGene_5386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107151203	107147990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107148000_107151200
ES.6660.23	chr11	-	2836	1	Intergenic	novelGene_5387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGGAGGGGATTTAT	NA	False	NA	NA	False	NA	NA	NA	107178201	107175365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107175400_107178200
ES.6660.24	chr11	-	2989	4	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-12	26288	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30.9120616516523	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107361537	107185166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.25	chr11	-	662	1	Intergenic	novelGene_5390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACGTCTGTTCCTTGAG	2627	False	NA	NA	False	TATAAA	-36	NA	107186705	107186043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107186000_107186700
ES.6660.26	chr11	-	159	1	Intergenic	novelGene_5391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107192264	107192105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107192100_107192300
ES.6660.27	chr11	-	223	1	Intergenic	novelGene_5392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAGAAAATGCCCAAGCT	NA	False	NA	NA	False	NA	NA	NA	107197804	107197581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107197600_107197800
ES.6660.28	chr11	-	1399	4	ISM	ENSMUSG00000040430.19	ENSMUST00000103064.10	6329	10	-19	112576	-19	161	5prime_fragment	FALSE	canonical	1	9	junction_1	26.7124606795322	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTAAAGACAGTATTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	107361544	107211293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_107211627_107212412_107212502_107228237_107228387_107360716
ES.6660.29	chr11	-	179	1	Intergenic	novelGene_5393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	107221115	107220936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107220900_107221100
ES.6660.30	chr11	-	209	1	Intergenic	novelGene_5394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATATACAAATACATTTTA	NA	False	NA	NA	False	NA	NA	NA	107271594	107271385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107271400_107271600
ES.6660.31	chr11	-	3354	1	Intergenic	novelGene_5395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTGAAAGTGCTTACT	3445	False	NA	NA	False	AAAAAG	-4	NA	107285780	107282426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107282400_107285800
ES.6660.32	chr11	-	3054	1	Intergenic	novelGene_5398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTTCTGTTGATTTCA	NA	False	NA	NA	False	NA	NA	NA	107307976	107304922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107304900_107308000
ES.6660.33	chr11	-	177	1	Intergenic	novelGene_5399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTATATAAATTAGAGC	6351	False	NA	NA	False	NA	NA	NA	107331533	107331356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107331400_107331500
ES.6660.34	chr11	-	185	1	Intergenic	novelGene_5401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGATTTTTTTTTTCAAG	2838	False	NA	NA	False	AAAAAG	-7	NA	107345366	107345181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107345200_107345400
ES.6660.4	chr11	-	5301	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	-950	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCATGTGGTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	107361574	107099667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.5	chr11	-	5333	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	21	-967	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCTCATGCTAAAACTA	NA	False	NA	NA	False	NA	NA	NA	107361504	107099684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.6	chr11	-	4783	9	NNC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-35	-1571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.206387117734	252	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATGTCTGCCATGTGA	NA	False	NA	NA	False	AATAGA	-14	NA	107361560	107100288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107103485_107107505_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.7	chr11	-	4446	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-19	-1775	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAAGTGTCGTTTCGCT	NA	False	NA	1	True	CATAAA	-27	NA	107361544	107100492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.8	chr11	-	2989	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-119	-3451	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGAGCCCCAGGTGAG	NA	False	NA	89	True	AATACA	-18	NA	107361644	107102168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6660.9	chr11	-	2709	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	-49	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107361574	107102259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ES.6661.1	chr11	+	174	1	Intergenic	novelGene_5406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAGAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	107368878	107369052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107368900_107369100
ES.6662.1	chr11	+	1961	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	-75	18	-75	-18	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370234	107388981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.10	chr11	+	3293	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	14	-1403	14	1403	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAAAGCTAAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	107370323	107390402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.11	chr11	+	3886	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	15	0	intron_retention	FALSE	canonical	3	2673	junction_3	114.06241438353	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCGTGGAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	107370324	107388999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
ES.6662.12	chr11	+	3509	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	21	69	intron_retention	FALSE	canonical	3	2673	junction_3	114.06241438353	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTTTTTTCTTACT	NA	False	NA	23	True	ATTAAA	-26	NA	107370330	107388628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
ES.6662.13	chr11	+	1569	11	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	21	137	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	863.641962852663	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCTTTCCCACTCTC	NA	False	NA	7	True	AGTAAA	-14	NA	107370330	107388696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107376375_107376436_107376544_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.14	chr11	+	5255	8	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	21	383	21	57	intron_retention	FALSE	canonical	3	2673	junction_3	116.926629707239	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTGTATATGTTGT	NA	False	NA	11	True	ATTAAA	-14	NA	107370330	107388616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228
ES.6662.15	chr11	+	2615	10	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	21	58	intron_retention	FALSE	canonical	3	2673	junction_3	116.47614072429	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370330	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107385631_107386513_107386592_107388349
ES.6662.17	chr11	+	6871	7	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	21	18	21	-18	intron_retention	FALSE	canonical	3	2673	junction_3	125.170217437429	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370330	107388981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842
ES.6662.19	chr11	+	3566	1	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-22	-14662	mono-exon	FALSE	NA	NA	NA	NA	NA	810	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	107370331	107373897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370300_107373900
ES.6662.2	chr11	+	4779	8	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-9	58	intron_retention	FALSE	canonical	3	2673	junction_3	120.226996187399	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370300	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107386592_107388349
ES.6662.20	chr11	+	3622	10	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	18	-22	-18	intron_retention	FALSE	canonical	3	2673	junction_3	110.932411855147	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370331	107388981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513
ES.6662.21	chr11	+	3496	10	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	144	-22	-144	intron_retention	FALSE	canonical	3	2673	junction_3	110.932411855147	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCCTGAAGTTGCCAGG	NA	False	NA	3	True	AATAAA	-15	NA	107370331	107388855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513
ES.6662.22	chr11	+	1259	4	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	10869	-22	-10429	5prime_fragment	FALSE	canonical	3	2673	junction_3	137.710646727921	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	107370331	107378130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239
ES.6662.23	chr11	+	6515	7	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	22	373	-22	67	intron_retention	FALSE	canonical	3	2673	junction_3	125.170217437429	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTTTTTTCTTA	NA	False	NA	21	True	ATTAAA	-24	NA	107370331	107388626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842
ES.6662.24	chr11	+	1475	11	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-20	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	861.074148955826	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAAGACTGTTTTC	NA	False	NA	-5	True	NA	NA	NA	107370333	107388600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384234_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.25	chr11	+	1503	11	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-19	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	854.748319682467	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370334	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107376369_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.26	chr11	+	2379	10	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-18	58	intron_retention	FALSE	canonical	3	2673	junction_3	107.609375882298	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370335	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107386592_107388349
ES.6662.27	chr11	+	401	1	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-18	-17823	mono-exon	FALSE	NA	NA	NA	NA	NA	810	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGACGTCTGGACTTAG	NA	False	NA	NA	False	AATAAA	-21	NA	107370335	107370736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370300_107370700
ES.6662.28	chr11	+	1577	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	26	301	-18	139	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTTTCCCACTCTCTG	NA	False	NA	9	True	AGTAAA	-16	NA	107370335	107388698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.29	chr11	+	3118	10	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	26	518	-18	-78	intron_retention	FALSE	canonical	3	2673	junction_3	110.932411855147	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTCGCTGATGTCTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	107370335	107388481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513
ES.6662.30	chr11	+	3484	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	26	-1606	-18	1606	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTATGGTATGTGTTCT	NA	False	NA	NA	False	ATTAAA	-37	NA	107370335	107390605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.31	chr11	+	1315	10	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-12	58	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	902.530407134557	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370341	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107386513_107386592_107388349
ES.6662.33	chr11	+	4981	8	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-10	-137	intron_retention	FALSE	canonical	3	2673	junction_3	120.226996187399	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGCCAGGGTGGTGA	NA	False	NA	10	True	AATAAA	-22	NA	107370343	107388862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107386592_107388349
ES.6662.34	chr11	+	3724	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-10	-143	intron_retention	FALSE	canonical	3	2673	junction_3	114.06241438353	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTGAAGTTGCCAGGG	NA	False	NA	4	True	AATAAA	-16	NA	107370343	107388856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
ES.6662.35	chr11	+	1627	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	36	241	-8	199	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGTTTGTGTCTCAGC	NA	False	NA	69	True	AAAACA	-19	NA	107370345	107388758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.38	chr11	+	3886	8	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	3	-66	intron_retention	FALSE	canonical	3	2673	junction_2	99.2340050340711	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAACCAAAAATAA	NA	False	NA	81	True	TATAAA	-34	NA	107370356	107388933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
ES.6662.4	chr11	+	5592	8	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	1	66	1	-66	intron_retention	FALSE	canonical	3	2673	junction_3	116.926629707239	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAACCAAAAATAA	NA	False	NA	81	True	TATAAA	-34	NA	107370310	107388933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228
ES.6662.40	chr11	+	1511	12	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	9	58	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1086.76035358109	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370362	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107375545_107375588_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.41	chr11	+	6103	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	9	1380	intron_retention	FALSE	canonical	3	2673	junction_3	117.538756905967	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107370362	107390379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107385631_107386513
ES.6662.43	chr11	+	4821	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-19	-18	intron_retention	FALSE	canonical	3	2673	junction_3	117.326401014435	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAGACCATGCAAGGATC	NA	False	NA	NA	False	NA	NA	NA	107370383	107388981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107384342_107385455_107385631_107386513
ES.6662.44	chr11	+	3489	10	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	-18	61	intron_retention	FALSE	canonical	2	4	junction_1	1176.63831672909	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTATATGTTGTTTTT	NA	False	NA	15	True	ATTAAA	-18	NA	107370384	107388620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107375545_107375588_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
ES.6662.45	chr11	+	921	6	ISM	ENSMUSG00000020720.14	ENSMUST00000106750.5	1311	10	12202	-58	12202	58	3prime_fragment	FALSE	canonical	3	2716	junction_4	82.6713977140825	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107382604	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.46	chr11	+	874	4	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	13918	143	13825	-143	3prime_fragment	FALSE	canonical	3	2716	junction_2	93.3856995952212	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTGAAGTTGCCAGGG	NA	False	NA	4	True	AATAAA	-16	NA	107384227	107388856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.5	chr11	+	1513	11	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	1	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	855.993954417904	895	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGGTGTATATGTTG	NA	False	NA	10	True	ATTAAA	-13	NA	107370310	107388615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386586_107388349
ES.6662.6	chr11	+	4161	9	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	2	382	2	58	intron_retention	FALSE	canonical	3	2673	junction_3	109.374857142764	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTGTATATGTTGTT	NA	False	NA	12	True	ATTAAA	-15	NA	107370311	107388617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455
ES.6662.7	chr11	+	3287	10	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	2	373	2	67	intron_retention	FALSE	canonical	3	2673	junction_3	110.932411855147	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTTTTTTCTTA	NA	False	NA	21	True	ATTAAA	-24	NA	107370311	107388626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513
ES.6662.8	chr11	+	3119	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	13	-1228	13	1228	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTAACGCCGGGCGGTG	NA	False	NA	NA	False	NA	NA	NA	107370322	107390227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6662.9	chr11	+	1755	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	14	135	14	-135	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCAGGGTGGTGATT	NA	False	NA	12	True	AATAAA	-24	NA	107370323	107388864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ES.6663.1	chr11	+	176	1	Intergenic	novelGene_5411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	6671	False	NA	NA	False	NA	NA	NA	107424193	107424369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107424200_107424400
ES.6664.1	chr11	+	6389	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-12617	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.2243829327854	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTACATATGTTTGC	8616	False	NA	10	True	AATAAA	-18	NA	107426138	107577770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107426334_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.10	chr11	+	5546	26	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1083	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	66.2693171837465	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9335	False	NA	9	True	AATAAA	-17	NA	107437672	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540173_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.11	chr11	+	6443	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1071	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9347	False	NA	9	True	AATAAA	-17	NA	107437684	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.13	chr11	+	6415	31	NNC	ENSMUSG00000020721.17	novel	937	4	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	58.6504238878307	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485831_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.14	chr11	+	7351	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	910	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGGTATGTTTCAGATC	9349	False	NA	NA	False	ATTAAA	-35	NA	107437686	107578679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.15	chr11	+	7288	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	49.3217050914925	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAAAATCTAGGGTAT	9349	False	NA	NA	False	ATTAAA	-25	NA	107437686	107578669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527142_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.18	chr11	+	2969	16	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-991	-18038	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_15	48.6281125824696	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGCAGAATCATATTATA	9427	False	NA	NA	False	AATAAA	-20	NA	107437764	107518882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175
ES.6664.19	chr11	+	3460	22	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-969	3359	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	39.7182252242719	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATGATGTTAGTGAGA	9449	False	NA	NA	False	ATTAAA	-16	NA	107437786	107540279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937
ES.6664.2	chr11	+	156	1	Intergenic	novelGene_5413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAATAAAATAAAAA	5962	False	NA	NA	False	NA	NA	NA	107434299	107434455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107434300_107434500
ES.6664.20	chr11	+	2532	17	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-969	-18034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	61.7110200855568	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAATCATATTATACCAC	9449	False	NA	NA	False	AATAAA	-24	NA	107437786	107518886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107518699
ES.6664.21	chr11	+	3510	23	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-969	3357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	54.7943752014658	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTGATGATGTTAGTGA	9449	False	NA	NA	False	ATTAAA	-14	NA	107437786	107540277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539942
ES.6664.22	chr11	+	5630	31	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-969	149	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_16	42.8598361587577	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACAGAGTATCTTTAAAA	9449	False	NA	NA	False	GATAAA	-13	NA	107437786	107563969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354
ES.6664.23	chr11	+	6415	34	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-959	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_31	56.713884071404	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9459	False	NA	9	True	AATAAA	-17	NA	107437796	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107574407_107574492_107576116_107576370_107577210
ES.6664.24	chr11	+	6084	30	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-959	75	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_2	47.4556179163148	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTCTAAAATGTATTTA	9459	False	NA	84	True	TATAAA	-15	NA	107437796	107577844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.25	chr11	+	6571	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-959	240	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCAGCATCTTCTAAGAC	9459	False	NA	NA	False	TTTAAA	-13	NA	107437796	107578009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.27	chr11	+	6215	31	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-885	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53.2071423776921	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9533	False	NA	9	True	AATAAA	-17	NA	107437870	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.29	chr11	+	6348	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-792	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	43.543966322807	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	9626	False	NA	7	True	AATAAA	-15	NA	107437963	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.3	chr11	+	6574	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1898	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.4087606305422	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	8520	False	NA	9	True	AATAAA	-17	NA	107436857	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437239_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.30	chr11	+	6326	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-708	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	48.5009262153827	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9710	False	NA	9	True	AATAAA	-17	NA	107438047	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.31	chr11	+	7222	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-707	900	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	44.433840830357	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAAAATCTAGGGTAT	9711	False	NA	NA	False	ATTAAA	-25	NA	107438048	107578669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.32	chr11	+	6773	30	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-691	1384	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	48.2421557207492	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTCATTGAAGCTGCAA	9727	False	NA	NA	False	NA	NA	NA	107438064	107565204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354
ES.6664.34	chr11	+	5861	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-666	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	54.8714406590532	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9752	False	NA	9	True	AATAAA	-17	NA	107438089	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438121_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107561280_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.35	chr11	+	6541	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-604	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	43.8152634968291	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9814	False	NA	9	True	AATAAA	-17	NA	107438151	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438500_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.36	chr11	+	6270	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-276	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	44.68849430712	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438479	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438500_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.37	chr11	+	6460	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-121	6808	-83	75	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTCTAAAATGTATTTA	NA	False	NA	84	True	TATAAA	-15	NA	107438672	107577844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.38	chr11	+	9018	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-35	-2765	-5	2765	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTATCATGGGTAT	NA	False	NA	NA	False	AATAAA	-26	NA	107438750	107580534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.39	chr11	+	6144	31	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	45.5885585061281	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438754	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.4	chr11	+	6504	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1870	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.513233441388	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	8548	False	NA	9	True	AATAAA	-17	NA	107436885	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437194_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.40	chr11	+	6262	32	NNC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	50.2578781726638	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438754	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576383_107577210
ES.6664.41	chr11	+	7159	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-31	-910	-1	910	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGGTATGTTTCAGATC	NA	False	NA	NA	False	ATTAAA	-35	NA	107438754	107578679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.42	chr11	+	2901	16	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-28	58892	2	-18043	5prime_fragment	FALSE	canonical	3	55	junction_15	44.0169664258378	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACACTGCAGAATCATA	NA	False	NA	NA	False	AATAAA	-15	NA	107438757	107518877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175
ES.6664.43	chr11	+	6242	32	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	32.985507491541	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438758	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.44	chr11	+	6218	34	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	50.6581658810462	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438758	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576205_107576288_107576370_107577210
ES.6664.46	chr11	+	5532	30	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-26	13798	4	151	5prime_fragment	FALSE	canonical	3	55	junction_15	38.6339878583082	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGTATCTTTAAAAAA	NA	False	NA	NA	False	GATAAA	-15	NA	107438759	107563971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354
ES.6664.49	chr11	+	6741	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-32	6438	6	445	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCTGGTGGCATAGTC	NA	False	NA	NA	False	NA	NA	NA	107438761	107578214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.5	chr11	+	6346	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1588	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.5837130202879	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	8830	False	NA	9	True	AATAAA	-17	NA	107437167	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437239_107437798_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.50	chr11	+	7037	31	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	6	900	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	45.5885585061281	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAAAATCTAGGGTAT	NA	False	NA	NA	False	ATTAAA	-25	NA	107438761	107578669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.53	chr11	+	6009	31	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	44.8553229840116	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438763	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.54	chr11	+	6128	33	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	56.4996456709022	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438764	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527142_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107561939_107563354_107563872_107576116_107576370_107577210
ES.6664.55	chr11	+	7232	34	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	12	900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.8212890889455	346	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAAAATCTAGGGTAT	NA	False	NA	NA	False	ATTAAA	-25	NA	107438767	107578669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107457744_107457787_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.56	chr11	+	5991	30	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_23	52.1126557965875	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107438767	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.57	chr11	+	6317	35	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.3124913221794	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438767	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107494950_107495882_107495948_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107519502_107519705_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.58	chr11	+	7019	32	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	12	913	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	48.2696639501085	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTATGTTTCAGATCCTT	NA	False	NA	NA	False	ATTAAA	-38	NA	107438767	107578682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.59	chr11	+	6088	33	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	51.4425403818425	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTGTTACATATGTTT	NA	False	NA	8	True	AATAAA	-16	NA	107438769	107577768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107494988_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.60	chr11	+	6190	31	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	51.8813710947067	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438776	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.61	chr11	+	5884	31	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_25	52.5851267523009	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTGTTACATATGTTT	NA	False	NA	8	True	AATAAA	-16	NA	107438776	107577768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.62	chr11	+	7185	33	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-5	901	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.9053567832691	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAAATCTAGGGTATG	NA	False	NA	NA	False	ATTAAA	-26	NA	107438776	107578670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.64	chr11	+	9034	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-17	4130	-5	2753	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAAGCCTCATTCACTG	NA	False	NA	NA	False	AATAAA	-14	NA	107438776	107580522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.66	chr11	+	6033	31	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	51.6864478261845	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107438777	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.67	chr11	+	5610	31	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-4	190	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.7744334410379	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACATGTATCTTTTTG	NA	False	NA	NA	False	TTTAAA	-23	NA	107438777	107564010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354
ES.6664.69	chr11	+	6049	32	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	45.7790695077433	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107438778	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.7	chr11	+	6467	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1094	58	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	36.7501052969107	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAAAAAAGTT	9324	False	NA	67	True	NA	NA	NA	107437661	107577827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.70	chr11	+	7054	32	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-3	877	combination_of_known_splicesites	FALSE	canonical	2	4	junction_16	46.3469025913566	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAACATTGTCAA	NA	False	NA	NA	False	ATTAAA	-2	NA	107438778	107578646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.71	chr11	+	7024	33	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-3	-2	intron_retention	FALSE	non_canonical	0	0	junction_30	47.411255503704	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107438778	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562862_107563361_107563872_107576116_107576370_107577210
ES.6664.72	chr11	+	3402	22	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	-3	37485	1	3364	5prime_fragment	FALSE	canonical	3	55	junction_15	42.0867800164635	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTTAGTGAGAGATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	107438782	107540284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937
ES.6664.74	chr11	+	6245	31	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	12229	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.623837489231	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107451022	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107451130_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.75	chr11	+	6142	30	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	26976	0	26968	0	3prime_fragment	FALSE	canonical	3	55	junction_13	31.3319081147601	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107465761	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.76	chr11	+	176	1	Intergenic	novelGene_5419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTGATATGTA	4440	False	NA	NA	False	NA	NA	NA	107483997	107484173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107484000_107484200
ES.6664.77	chr11	+	5973	21	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	65964	5786	-13389	1097	3prime_fragment	FALSE	canonical	3	116	junction_4	24.9825439056954	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCGTAGCTCTAATTTT	NA	False	NA	NA	False	AATGAA	-19	NA	107504757	107578866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.78	chr11	+	3158	1	NIC	ENSMUSG00000020721.17	novel	5953	30	NA	NA	-2905	-18521	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAAAAATCTTTTAA	NA	False	NA	NA	False	GGGGCT	-42	NA	107515241	107518399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107515200_107518400
ES.6664.79	chr11	+	4228	18	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	78571	3	-790	-3	3prime_fragment	FALSE	canonical	3	55	junction_1	39.2979040091908	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATTGTTACATATGT	NA	False	NA	6	True	AATAAA	-14	NA	107517356	107577766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.8	chr11	+	6365	34	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1094	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.8796763377787	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTGTTACATATGTTT	9324	False	NA	8	True	AATAAA	-16	NA	107437661	107577768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437710_107437798_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563861_107576116_107576370_107577210
ES.6664.81	chr11	+	5157	16	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	82995	2	-3546	-2	3prime_fragment	FALSE	canonical	3	189	junction_5	16.2406896405294	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTGTTACATATGTT	NA	False	NA	7	True	AATAAA	-15	NA	107521780	107577767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.82	chr11	+	3164	11	NNC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	14609	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.2797058816904	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107539935	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107540163_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.83	chr11	+	2932	10	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	108082	7	-15010	-7	3prime_fragment	FALSE	canonical	3	189	junction_3	15.8098266051197	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTGTATTGTTACAT	-1	True	NA	2	True	AATAAA	-10	NA	107546867	107577762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.84	chr11	+	7937	5	NNC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	-7314	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.697202842042	359	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGAGTGTTTCTTTTG	5725	False	NA	NA	False	AATAAA	-19	NA	107554563	107584652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107554642_107556824_107556905_107574407_107574492_107576116_107576370_107577210
ES.6664.85	chr11	+	6293	2	ISM	ENSMUSG00000020721.17	ENSMUST00000133862.2	3753	14	36471	20	-7260	-20	intron_retention	FALSE	canonical	3	208	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAACAACAAAGC	5779	False	NA	NA	False	NA	NA	NA	107554617	107563093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107554642_107556824
ES.6664.86	chr11	+	2282	6	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	118038	0	-5054	0	3prime_fragment	FALSE	canonical	3	195	junction_1	15.4324333790883	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	7985	False	NA	9	True	AATAAA	-17	NA	107556823	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.87	chr11	+	3831	5	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	120445	0	-2647	0	3prime_fragment	FALSE	canonical	3	214	junction_2	9.96242942258564	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107559230	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.88	chr11	+	2655	3	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	151	0	intron_retention	FALSE	canonical	3	220	junction_1	6.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107562028	107577769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_107563872_107576116_107576370_107577210
ES.6664.89	chr11	+	7830	3	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	124938	5	-54	-5	3prime_fragment	FALSE	canonical	3	220	junction_1	6.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTGGAGAGTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	107563731	107584647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107563872_107576116_107576370_107577210
ES.6664.9	chr11	+	6853	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1090	445	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_15	41.902244891546	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCCTGGTGGCATAGTC	9328	False	NA	NA	False	NA	NA	NA	107437665	107578214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ES.6664.90	chr11	+	3682	1	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	138605	3572	13613	3311	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCGCGACTGCGAGTC	NA	False	NA	NA	False	CATAAA	-16	NA	107577398	107581080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_107577400_107581100
ES.6665.1	chr11	-	251	2	Intergenic	novelGene_5405	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAGAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107470863	107363500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107363582_107470693
ES.6665.10	chr11	-	5683	1	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTTCCCAACCCAAAAG	9457	False	NA	NA	False	NA	NA	NA	107445318	107439635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107439600_107445300
ES.6665.11	chr11	-	4218	1	Intergenic	novelGene_5414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAGAGTCCTTTAAATC	9457	False	NA	NA	False	NA	NA	NA	107445318	107441100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107441100_107445300
ES.6665.12	chr11	-	175	1	Intergenic	novelGene_5415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAACAACA	6922	False	NA	NA	False	NA	NA	NA	107447853	107447678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107447700_107447900
ES.6665.13	chr11	-	177	1	Intergenic	novelGene_5416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAATTATCTTAAAAAA	6755	False	NA	NA	False	NA	NA	NA	107455309	107455132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107455100_107455300
ES.6665.14	chr11	-	173	1	Intergenic	novelGene_5417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAGAAA	6035	False	NA	NA	False	NA	NA	NA	107456029	107455856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107455900_107456000
ES.6665.15	chr11	-	226	1	Intergenic	novelGene_5418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGATAGGCAAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	107470865	107470639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107470600_107470900
ES.6665.2	chr11	-	4220	1	Antisense	novelGene_ENSMUSG00000020720.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCTCAAAATCTAAACAG	3421	False	NA	NA	False	NA	NA	NA	107384390	107380170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107380200_107384400
ES.6665.3	chr11	-	3392	1	Antisense	novelGene_ENSMUSG00000020720.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGCCAGGCATGGTGGTG	3421	False	NA	NA	False	NA	NA	NA	107384390	107380998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107381000_107384400
ES.6665.4	chr11	-	3038	3	Antisense	novelGene_ENSMUSG00000020720.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCGGCCAG	3421	False	NA	NA	False	NA	NA	NA	107384390	107381009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107381355_107381611_107382755_107382840
ES.6665.5	chr11	-	143	2	Intergenic	novelGene_5407	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCCAAAGCCACACTA	NA	False	NA	NA	False	NA	NA	NA	107403238	107382069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107382080_107403105
ES.6665.6	chr11	-	419	1	Intergenic	novelGene_5408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTAAGCGAGGACGGA	NA	False	NA	NA	False	NA	NA	NA	107393954	107393535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107393500_107394000
ES.6665.7	chr11	-	222	1	Intergenic	novelGene_5409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	107393956	107393734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107393700_107394000
ES.6665.8	chr11	-	143	1	Intergenic	novelGene_5410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107403238	107403095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107403100_107403200
ES.6665.9	chr11	-	173	1	Intergenic	novelGene_5412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	107431820	107431647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107431600_107431800
ES.6666.1	chr11	-	5202	3	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAATGTATGTATTTA	NA	False	NA	NA	False	AAAAAG	-45	NA	107494853	107484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107486020_107489973_107490026_107491099
ES.6666.2	chr11	-	4435	6	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAATGTATGTATTTA	NA	False	NA	NA	False	AAAAAG	-45	NA	107497493	107484623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107486020_107489973_107490026_107491099_107491176_107493133_107493334_107493760_107493868_107494889
ES.6666.3	chr11	-	4123	4	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	406	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-45	NA	107495759	107484650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107486020_107489973_107490026_107491099_107491176_107493133
ES.6666.4	chr11	-	177	1	Intergenic	novelGene_5420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107486894	107486717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107486700_107486900
ES.6666.5	chr11	-	3988	1	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTCCTCCATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	107493225	107489237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107489200_107493200
ES.6666.6	chr11	-	5448	2	Antisense	novelGene_ENSMUSG00000020721.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTCCTCCATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	107495759	107489237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_107490026_107491099
ES.6667.1	chr11	-	158	1	Intergenic	novelGene_5421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	107500249	107500091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107500100_107500200
ES.6668.1	chr11	-	277	1	Intergenic	novelGene_5422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAACCAACTCTGAGC	NA	False	NA	NA	False	NA	NA	NA	107501331	107501054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107501100_107501300
ES.6668.2	chr11	-	157	1	Intergenic	novelGene_5423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107501330	107501173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107501200_107501300
ES.6669.1	chr11	-	217	1	Intergenic	novelGene_5424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGCTAAGAAACTAAAAG	9060	False	NA	NA	False	NA	NA	NA	107565462	107565245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107565200_107565500
ES.667.1	chr1	-	167	1	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAATAACCT	NA	False	NA	NA	False	NA	NA	NA	65584547	65584380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_65584400_65584500
ES.6670.1	chr11	-	1302	4	FSM	ENSMUSG00000020722.6	ENSMUST00000021065.6	1249	4	-55	2	-55	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTTTTCCCATATG	NA	False	NA	NA	False	AATAAA	-15	NA	107607403	107594045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107594717_107595130_107595269_107596602_107596678_107606985
ES.6671.1	chr11	-	3743	4	FSM	ENSMUSG00000020723.4	ENSMUST00000021066.4	3500	4	-242	-1	-242	1	multi-exon	FALSE	canonical	2	7	junction_1	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGATGTGGGGAGGT	NA	False	NA	NA	False	AATAAA	-19	NA	107685625	107623181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107626145_107627552_107627694_107632746_107632831_107685070
ES.6672.1	chr11	-	177	1	Intergenic	novelGene_5425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGAAATAGAGTA	NA	False	NA	NA	False	NA	NA	NA	107697746	107697569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_107697600_107697700
ES.6673.1	chr11	-	3769	6	FSM	ENSMUSG00000040373.13	ENSMUST00000106742.8	3678	6	-86	-5	-86	5	multi-exon	FALSE	canonical	0	0	junction_5	3.00665927567458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGCTTTCTGGAGT	NA	False	NA	NA	False	TATAAA	-19	NA	107802274	107765425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107802125
ES.6673.2	chr11	-	3713	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	-9	1	-9	-1	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTGTCTTTCCTTGGA	NA	False	NA	NA	False	TATAAA	-17	NA	107805890	107765497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ES.6673.3	chr11	-	3479	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	9	217	9	-217	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGACTGCCGACCGTGT	NA	False	NA	NA	False	AAAACA	-19	NA	107805872	107765713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ES.6673.4	chr11	-	2861	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	11	833	11	-833	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACTATGAATATAATCAT	NA	False	NA	NA	False	NA	NA	NA	107805870	107766329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ES.6673.5	chr11	-	3045	6	NNC	ENSMUSG00000040373.13	novel	3705	6	NA	NA	-7	-838	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.03315017762062	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAATAACTATGAATATA	NA	False	NA	NA	False	TTTAAA	-45	NA	107805888	107766334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107768607_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ES.6674.1	chr11	+	2830	1	Intergenic	novelGene_5426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTTGGAGAGAAGG	NA	False	NA	NA	False	NA	NA	NA	107932702	107935532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_107932700_107935500
ES.6675.1	chr11	+	3312	1	Intergenic	novelGene_5428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1468	False	NA	NA	False	NA	NA	NA	108183316	108186628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_108183300_108186600
ES.6676.1	chr11	-	7079	7	ISM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	362062	3	-2227	-3	3prime_fragment	FALSE	canonical	3	13	junction_2	3.07769755210323	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGCGGCTGTCATTT	NA	False	NA	NA	False	AATAAA	-16	NA	107872692	107824215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436
ES.6676.2	chr11	-	3980	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	-2	4431	-2	359	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTGATATGTTCATATA	6282	False	NA	NA	False	AATATA	-13	NA	108234756	107828643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
ES.6676.3	chr11	-	3824	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	-216	4801	-216	-11	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTGTGCTATATTTGTG	6068	False	NA	NA	False	TATAAA	-27	NA	108234970	107829013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
ES.6676.4	chr11	-	2012	6	NNC	ENSMUSG00000050965.15	novel	2265	7	NA	NA	765	-74	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.88557558782486	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTATATTATTGATATA	NA	False	NA	NA	False	AATAAA	-15	NA	107869700	107829076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107869587
ES.6676.5	chr11	-	3024	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	42	5343	42	-553	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGGAGATGACTCT	6326	False	NA	NA	False	GATAAA	-20	NA	108234712	107829555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
ES.6676.6	chr11	-	3772	2	ISM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	330932	75617	-191	-30663	internal_fragment	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTAAATGAGCACTTG	NA	False	NA	NA	False	NA	NA	NA	107903822	107899829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_107903550_107903770
ES.6676.7	chr11	-	191	1	Intergenic	novelGene_5427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTCTTATGAAAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	108006824	108006633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_108006600_108006800
ES.6677.1	chr11	+	162	1	Intergenic	novelGene_5429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	108307228	108307390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_108307200_108307400
ES.6678.1	chr11	+	3144	26	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-44	1	combination_of_known_splicesites	TRUE	canonical	2	2	junction_14	13.0859313768642	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGCTTTCTTTGTGT	NA	False	NA	NA	False	CATAAA	-20	NA	108315973	108751181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.10	chr11	+	3241	25	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	13.6151850479121	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTTCTTTTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	108316101	108751439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.11	chr11	+	3268	26	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-6	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	13.4521373766402	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTTCTTTTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	108316110	108751439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108746608_108746711_108750168_108750234_108751017
ES.6678.12	chr11	+	3211	26	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-3	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	13.4761418811172	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTTCTTTTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	108316113	108751439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.13	chr11	+	3457	27	NIC	ENSMUSG00000020728.18	novel	3395	27	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.235908451002	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTTTTCTTTTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	108316310	108751439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316477_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.14	chr11	+	888	6	ISM	ENSMUSG00000020728.18	ENSMUST00000138538.9	1881	17	38	59232	-5	-610	5prime_fragment	FALSE	canonical	1	6	junction_1	18.7253838411927	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATCTATTAAACGTTTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	108316324	108363009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_108316477_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
ES.6678.15	chr11	+	3207	1	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-26996	1718	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTGACTTATGGC	NA	False	NA	NA	False	AATAAA	-17	NA	108362130	108365337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108362100_108365300
ES.6678.2	chr11	+	3190	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	37	386101	37	1721	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGACTTATGGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	108316054	108365340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
ES.6678.3	chr11	+	3404	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	48	1	-26	0	multi-exon	FALSE	canonical	3	13	junction_14	12.2793543958426	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTTTCTTTTTACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	108316065	108751440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.4	chr11	+	3503	28	FSM	ENSMUSG00000020728.18	ENSMUST00000061287.12	3485	28	-18	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_2	13.1834164439952	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTTTTCTTTTTACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	108316073	108751440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_108316178_108323581_108323689_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.5	chr11	+	851	6	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	74	388403	0	-581	5prime_fragment	FALSE	canonical	3	43	junction_4	6.34350061086148	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTGAAAGAACTTTATG	NA	False	NA	NA	False	ATTAAA	-17	NA	108316091	108363038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842
ES.6678.6	chr11	+	3679	23	ISM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	75	101814	1	1064	5prime_fragment	FALSE	canonical	3	13	junction_14	13.1724104359914	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTTGTAAGCTTTTT	NA	False	NA	NA	False	NA	NA	NA	108316092	108649627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495
ES.6678.7	chr11	+	3051	5	NIC	ENSMUSG00000020728.18	novel	1437	6	NA	NA	-5	1716	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	23.4360832905159	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCTATGTGACTTATG	NA	False	NA	NA	False	AATAAA	-15	NA	108316097	108365335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108362842
ES.6678.8	chr11	+	3105	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	81	267	-4	-1	multi-exon	FALSE	canonical	3	13	junction_14	12.2793543958426	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCACTGGTTGGCTTTC	NA	False	NA	NA	False	CATAAA	-13	NA	108316098	108751174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6678.9	chr11	+	2963	26	NIC	ENSMUSG00000020728.18	novel	3453	27	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	13.4761418811172	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACTGGTTGGCTTTCTT	NA	False	NA	NA	False	CATAAA	-15	NA	108316098	108751176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ES.6679.1	chr11	+	178	1	Intergenic	novelGene_5430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	108779379	108779557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_108779400_108779600
ES.668.1	chr1	+	5597	14	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	4.07909956417318	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214345	66481740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.10	chr1	+	2743	15	FSM	ENSMUSG00000015222.19	ENSMUST00000114017.8	4981	15	9	2229	6	-157	multi-exon	FALSE	canonical	2	3	junction_1	6.25846365707581	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATTTGTGATACTTCC	NA	False	NA	NA	False	NA	NA	NA	66214480	66478958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66214655_66232277_66232341_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.11	chr1	+	5675	16	NNC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.82320173683504	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214480	66481740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66214655_66290820_66290872_66361143_66361302_66361562_66361628_66362062_66362118_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.2	chr1	+	2896	14	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-20	-10	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	4.07909956417318	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACAAAGAGTTTTAG	NA	False	NA	NA	False	AATAAA	-5	NA	66214411	66479105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.3	chr1	+	5586	15	FSM	ENSMUSG00000015222.19	ENSMUST00000114017.8	4981	15	-50	-555	-10	0	multi-exon	FALSE	canonical	2	3	junction_1	6.25846365707581	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAAGTTTCAGATTTTTT	NA	False	NA	16	True	AATAAA	-17	NA	66214421	66481742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66214655_66232277_66232341_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.4	chr1	+	5443	15	NNC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	6.32294170752307	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214454	66481740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419738_66419782_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.5	chr1	+	4377	11	NNC	ENSMUSG00000015222.19	novel	5440	14	NA	NA	-9	2944	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.00222194794152	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGTGTGGTAAAGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	66214462	66467607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66214655_66290820_66290872_66303581_66303637_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355
ES.668.6	chr1	+	5817	16	NIC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	8.63069457743054	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214464	66481740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66214655_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66455502_66455710_66455890_66456026_66459296_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.668.8	chr1	+	5529	15	NNC	ENSMUSG00000015222.19	novel	4981	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.55793946652074	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	NA	False	NA	14	True	AATAAA	-15	NA	66214465	66481740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66214655_66288000_66288053_66290820_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ES.6680.1	chr11	-	148	1	Intergenic	novelGene_5431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAGAAA	NA	False	NA	61	True	NA	NA	NA	108796231	108796083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_108796100_108796200
ES.6681.1	chr11	+	3209	10	NNC	ENSMUSG00000000142.16	novel	2045	4	NA	NA	-2488	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.5939152911951	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108808686	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_108808800_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.12	chr11	+	4077	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-4	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	15.2345003199974	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGCCTCATCTTT	NA	False	NA	3	True	ATTAAA	-15	NA	108812157	108841605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812192_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.13	chr11	+	4076	11	NNC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-140	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8015821992609	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCAGCCTCATCTTTG	NA	False	NA	4	True	ATTAAA	-16	NA	108812333	108841606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_108812368_108813979_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.14	chr11	+	4411	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.8015821992609	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108812458	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812823_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.15	chr11	+	4105	11	NNC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	626	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8015821992609	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGCCTCATCTTT	NA	False	NA	3	True	ATTAAA	-15	NA	108813099	108841605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_108813162_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.16	chr11	+	4432	8	NIC	ENSMUSG00000000142.16	novel	4260	11	NA	NA	-29	0	intron_retention	FALSE	canonical	3	42	junction_3	5.54020555133295	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108813977	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108814929_108822264_108822406_108830137_108830241_108832728_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.2	chr11	+	4143	11	NNC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-2471	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.8015821992609	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108808703	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_108808800_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.3	chr11	+	4283	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	-23	0	-23	0	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811151	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.5	chr11	+	3904	10	NIC	ENSMUSG00000000142.16	novel	4260	11	NA	NA	157	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	18.8686165724471	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGCCTCATCTTT	NA	False	NA	3	True	ATTAAA	-15	NA	108811331	108841605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.6	chr11	+	4452	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811614	108841609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.7	chr11	+	4656	10	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	19	-4	intron_retention	FALSE	canonical	3	42	junction_4	5.4794791137502	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGCCTCATCTTT	NA	False	NA	3	True	ATTAAA	-15	NA	108811644	108841605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.8	chr11	+	4104	9	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	34	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.0779867741604	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATGTCAGCCTCATCTT	NA	False	NA	2	True	ATTAAA	-14	NA	108811659	108841604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108832728_108832870_108833016_108833523_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6681.9	chr11	+	3386	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	35	252	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGAGTCCTTACTGATA	NA	False	NA	NA	False	NA	NA	NA	108811660	108840589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ES.6682.1	chr11	-	2820	1	Antisense	novelGene_ENSMUSG00000000142.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTCTTCACTTGGA	NA	False	NA	NA	False	TTTAAA	-12	NA	108843626	108840806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_108840800_108843600
ES.6683.1	chr11	+	164	1	Intergenic	novelGene_5432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAATACAAAA	NA	False	NA	NA	False	NA	NA	NA	109093520	109093684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_109093500_109093700
ES.6684.1	chr11	-	5375	1	Genic_Genomic	ENSMUSG00000020599.14	novel	NA	NA	NA	NA	11739	-4491	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTACTTTGTCTGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	109126052	109120677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_109120700_109126100
ES.6685.1	chr11	-	4205	3	ISM	ENSMUSG00000020599.14	ENSMUST00000103062.9	1743	10	-3875	22674	-3875	7967	5prime_fragment	FALSE	canonical	3	18	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGTTTGTTTGATTT	NA	False	NA	NA	False	TTTAAA	-39	NA	109144852	109138860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_109139004_109139804_109139867_109140852
ES.6685.10	chr11	-	1894	10	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8488	-1548	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	5.53774924194538	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTCTTTATTATTC	NA	False	NA	NA	False	NA	NA	NA	109180404	109148375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.11	chr11	-	1408	8	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8517	-1555	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0129196061939	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTTATTTGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	109180375	109148382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109148571_109148676_109149526_109150652_109150725_109159748_109159831_109164101_109164119_109166721_109166753_109167395_109167447_109180257
ES.6685.12	chr11	-	1622	11	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8493	-1709	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0776981498753	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGGCGTTAGTTCCTT	NA	False	NA	NA	False	TATAAA	-28	NA	109180399	109148536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109148571_109148676_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.2	chr11	-	3729	1	NIC	ENSMUSG00000020599.14	novel	2434	19	NA	NA	-1612	7967	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGTTTGTTTGATTT	1769	False	NA	NA	False	TTTAAA	-39	NA	109142589	109138860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_109138900_109142600
ES.6685.3	chr11	-	972	12	NNC	ENSMUSG00000020599.14	novel	2313	17	NA	NA	8482	7963	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	5.1889902519383	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAATCTGGTTTGTTTG	NA	False	NA	NA	False	TTTAAA	-35	NA	109180410	109138864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109139004_109139804_109139867_109140852_109140883_109150661_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.4	chr11	-	4919	10	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8486	1475	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	5.53774924194538	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGACTGTCCTGACT	NA	False	NA	NA	False	NA	NA	NA	109180406	109145352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.5	chr11	-	4696	10	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8517	1283	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	5.53774924194538	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTCACCAGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	109180375	109145544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.6	chr11	-	1431	3	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	-9719	-1205	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACATCGCCTCTCCTA	NA	False	NA	NA	False	NA	NA	NA	109150696	109148032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109148571_109148676_109149526_109150652
ES.6685.7	chr11	-	2139	10	FSM	ENSMUSG00000020599.14	ENSMUST00000106704.3	3464	10	1	1324	1	-1324	multi-exon	FALSE	canonical	2	4	junction_9	9.53486131241108	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCCAGCTCAGTTAAGT	NA	False	NA	NA	False	NA	NA	NA	109188931	109148151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109188763
ES.6685.8	chr11	-	2108	10	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8497	-1325	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	5.53774924194538	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGCCAGCTCAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	109180395	109148152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6685.9	chr11	-	1773	11	NNC	ENSMUSG00000020599.14	novel	3464	10	NA	NA	8504	-1547	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.0776981498753	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTCTTTATTATTCT	NA	False	NA	NA	False	NA	NA	NA	109180388	109148374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109148571_109148676_109149526_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
ES.6686.1	chr11	+	6221	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-60	-1	-60	1	multi-exon	TRUE	canonical	3	267	junction_2	46.1976430375211	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAGCACGACGTTATTG	NA	False	NA	13	True	AATAAA	-15	NA	109253596	109292196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.10	chr11	+	5696	2	NNC	ENSMUSG00000020611.15	novel	6160	4	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGTAGCACGACGTT	NA	False	NA	9	True	AATAAA	-11	NA	109253651	109292192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109254083_109286927
ES.6686.11	chr11	+	2888	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-4	3276	-4	-3276	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTTGGTAATATCATGA	NA	False	NA	-99	True	TATAAA	-14	NA	109253652	109288919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.12	chr11	+	3006	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	2	3152	2	-3152	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCATTTAAATGTAT	NA	False	NA	25	True	NA	NA	NA	109253658	109289043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.13	chr11	+	5852	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	2	306	2	-306	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	109253658	109291889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.14	chr11	+	831	4	NNC	ENSMUSG00000020611.15	novel	914	3	NA	NA	18	196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.002164486953	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAACTGAGATATACGT	NA	False	NA	1	True	AATAAA	-16	NA	109253674	109271497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109254083_109256361_109256589_109271040_109271128_109271388
ES.6686.15	chr11	+	3121	2	NIC	ENSMUSG00000020611.15	novel	914	3	NA	NA	70	-2	intron_retention	FALSE	canonical	3	100	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTATGTCCTCTTTTG	NA	False	NA	7	True	AATAAA	-16	NA	109253726	109271299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109256589_109271040
ES.6686.16	chr11	+	4265	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	121	1774	121	-1774	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGGTTATATCCTGAGAC	NA	False	NA	NA	False	AATAAA	-12	NA	109253777	109290421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.17	chr11	+	6178	5	NNC	ENSMUSG00000020611.15	novel	6160	4	NA	NA	128	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.754443524745	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACCTGGTAGCACGAC	NA	False	NA	6	True	AATAAA	-8	NA	109253784	109292189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109254083_109256361_109256589_109276844_109276997_109283171_109283223_109286739
ES.6686.18	chr11	+	5502	2	ISM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	29514	6	29514	-6	3prime_fragment	FALSE	canonical	3	267	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACCTGGTAGCACGAC	NA	False	NA	6	True	AATAAA	-8	NA	109283170	109292189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_109283223_109286739
ES.6686.19	chr11	+	5456	1	NIC	ENSMUSG00000020611.15	novel	6160	4	NA	NA	33082	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTAGCACGACGTTAT	NA	False	NA	11	True	AATAAA	-13	NA	109286738	109292194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109286700_109292200
ES.6686.2	chr11	+	6344	5	NNC	ENSMUSG00000020611.15	novel	6160	4	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_3	156.678612133246	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTAGCACGACGTTATT	NA	False	NA	12	True	AATAAA	-14	NA	109253624	109292195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109254083_109256361_109256589_109283171_109283223_109285697_109285850_109286739
ES.6686.3	chr11	+	4696	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-32	1496	-32	-1496	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTTTCATTTTATTTG	NA	False	NA	18	True	AATAAA	-29	NA	109253624	109290699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.4	chr11	+	4523	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-30	1667	-30	-1667	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCGAGGTGCAATTTGT	NA	False	NA	NA	False	NA	NA	NA	109253626	109290528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.5	chr11	+	941	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-28	1	-28	-1	multi-exon	FALSE	canonical	3	100	junction_2	132.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTATGTCCTCTTTTGC	NA	False	NA	8	True	AATAAA	-17	NA	109253628	109271300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109271040
ES.6686.6	chr11	+	5404	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-26	782	-26	-782	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTGTGATGTGACTTT	NA	False	NA	14	True	AATAAA	-25	NA	109253630	109291413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.7	chr11	+	1403	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-23	4780	-23	-4780	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGTGTGTCTAACT	NA	False	NA	NA	False	TTTAAA	-31	NA	109253633	109287415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6686.8	chr11	+	1144	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	-12	-218	-12	218	multi-exon	FALSE	canonical	3	100	junction_2	132.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGGTTTATTGCTTG	NA	False	NA	23	True	AATAAA	-38	NA	109253644	109271519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109271040
ES.6686.9	chr11	+	3812	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	-11	2359	-11	-2359	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAGACCTTAATTTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	109253645	109289836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ES.6687.1	chr11	-	2200	1	Intergenic	novelGene_5433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGTTTAAATGTCAT	NA	False	NA	NA	False	NA	NA	NA	109279467	109277267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_109277300_109279500
ES.6688.1	chr11	+	1655	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	1	1160	1	-1	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTGGCCCTAGGAA	NA	False	NA	18	True	AATAAA	-14	NA	109316772	109327814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.11	chr11	+	1554	9	NNC	ENSMUSG00000020610.18	novel	2997	8	NA	NA	-40	-229	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.2458991690786	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGGGTAGAGTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	109317005	109327586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109317217_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.12	chr11	+	1203	5	ISM	ENSMUSG00000020610.18	ENSMUST00000125108.2	1846	6	207	891	-31	-891	3prime_fragment	FALSE	canonical	3	149	junction_3	13.4257215820976	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGTGTTTTCTGTAG	NA	False	NA	9	True	AATAAA	-27	NA	109317014	109320980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749
ES.6688.2	chr11	+	5249	8	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	11	-232	intron_retention	FALSE	non_canonical	0	0	junction_5	61.0433101517743	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCGTGGGTAGAGTT	NA	False	NA	11	True	AATAAA	-13	NA	109316782	109327583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320662_109320749_109324880_109325405_109325583_109327388
ES.6688.3	chr11	+	1393	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	32	1391	2	-232	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCGTGGGTAGAGTT	NA	False	NA	11	True	AATAAA	-13	NA	109316803	109327583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.4	chr11	+	1776	8	NIC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	7	-232	intron_retention	FALSE	canonical	3	91	junction_1	26.7840951891611	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCGTGGGTAGAGTT	NA	False	NA	11	True	AATAAA	-13	NA	109316814	109327583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109316857_109317311_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.5	chr11	+	1374	9	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	8	-233	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	54.2557600628726	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTCGTGGGTAGAGT	NA	False	NA	10	True	AATAAA	-12	NA	109316815	109327582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109316857_109317311_109317402_109317795_109317924_109319633_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.6	chr11	+	2032	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-207	7	37	-7	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCATTCTGTGTGGCCC	NA	False	NA	12	True	AATAAA	-8	NA	109316844	109327808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.7	chr11	+	1781	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	-181	232	63	-232	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCGTGGGTAGAGTT	NA	False	NA	11	True	AATAAA	-13	NA	109316870	109327583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.8	chr11	+	1925	8	NNC	ENSMUSG00000020610.18	novel	2997	8	NA	NA	-100	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	55.3699985072591	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCATTCTGTGTGGCCC	NA	False	NA	12	True	AATAAA	-8	NA	109316945	109327808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109317402_109317795_109317924_109319633_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ES.6688.9	chr11	+	2228	7	NNC	ENSMUSG00000020610.18	novel	2997	8	NA	NA	-100	-233	intron_retention	TRUE	canonical	3	19	junction_5	55.1767362411209	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTCGTGGGTAGAGT	NA	False	NA	10	True	AATAAA	-12	NA	109316945	109327582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320876_109324715_109325583_109327388
ES.6689.1	chr11	+	678	1	ISM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	11523	2	-2687	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGTCATTTCGCGTT	NA	False	NA	4	True	ATTAAA	-17	NA	109328294	109328972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_109328300_109329000
ES.669.1	chr1	+	4232	4	ISM	ENSMUSG00000055567.19	ENSMUST00000152844.2	1912	6	12785	-2480	12785	-5	3prime_fragment	FALSE	canonical	0	0	junction_1	1.88561808316413	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTGCTCTAATTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	66731642	66738302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_66731749_66732850_66732963_66733523_66733724_66734488
ES.669.2	chr1	+	4182	3	ISM	ENSMUSG00000055567.19	ENSMUST00000152844.2	1912	6	13934	-2477	13934	-8	3prime_fragment	FALSE	canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTAATGTGCTCTAATT	NA	False	NA	NA	False	AATAAA	-13	NA	66732791	66738299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_66732963_66733523_66733724_66734488
ES.669.3	chr1	+	3025	3	ISM	ENSMUSG00000055567.19	ENSMUST00000152844.2	1912	6	13939	-1325	13939	-1160	3prime_fragment	FALSE	canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGTGATGCTTAATAAT	NA	False	NA	NA	False	AGTAAA	-16	NA	66732796	66737147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_66732963_66733523_66733724_66734488
ES.6690.1	chr11	+	5449	16	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-166	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.80992854992788	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCATTGCCATGATTTT	249	False	NA	NA	False	AATAAA	-17	NA	109364033	109464153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109374532_109376400_109376531_109376584_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109457049_109457149_109463044
ES.6690.10	chr11	+	1631	6	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-73	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.51361950083609	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATGAGTCTATGTCGC	342	False	NA	NA	False	GATAAA	-15	NA	109364126	109381728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109374532_109374618_109376301_109376400_109376531_109376584_109380593
ES.6690.11	chr11	+	1425	4	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-24	896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.59966329107444	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCAATTGATGAGTCT	391	False	NA	NA	False	GATAAA	-8	NA	109364175	109381721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109374532_109374618_109380593
ES.6690.12	chr11	+	3431	15	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.25529396145881	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCCATGATTTTATT	402	False	NA	NA	False	AATAAA	-20	NA	109364186	109464156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109376301_109376400_109376531_109376584_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ES.6690.13	chr11	+	3503	14	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	36	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.75638044110291	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAACAAAATAAAAATGT	451	False	NA	NA	False	NA	NA	NA	109364235	109464122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364454_109369195_109369336_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109457049_109457149_109463044
ES.6690.14	chr11	+	3258	13	NNC	ENSMUSG00000020604.14	novel	430	4	NA	NA	242	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.17944947177034	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGCATTGCCATGAT	657	False	NA	NA	False	AATAAA	-14	NA	109364441	109464150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364486_109369195_109369336_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ES.6690.15	chr11	+	1846	7	NNC	ENSMUSG00000020604.14	novel	3232	12	NA	NA	59	40913	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3.09120616516523	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTGCTTTTGGTCCTG	NA	False	NA	NA	False	NA	NA	NA	109376490	109421738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109376584_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109421354
ES.6690.2	chr11	+	2691	7	NIC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-114	-36223	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.68741924943285	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACATTTGCTCAGCACCT	301	False	NA	NA	False	NA	NA	NA	109364085	109427928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109364248_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082
ES.6690.3	chr11	+	4578	4	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-108	8183	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	5.71547606649408	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTCTGTGATGGAGC	307	False	NA	NA	False	AATAAA	-28	NA	109364091	109389008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109380593_109381477_109385609
ES.6690.4	chr11	+	3327	13	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.69129254365919	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGCATTGCCATGATT	310	False	NA	NA	False	AATAAA	-15	NA	109364094	109464151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109457049_109457149_109463044
ES.6690.5	chr11	+	3373	13	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.62466929133727	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCCATGATTTTATT	310	False	NA	NA	False	AATAAA	-20	NA	109364094	109464156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ES.6690.6	chr11	+	3224	12	NIC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.89823754707465	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCCATGATTTTATT	319	False	NA	NA	False	AATAAA	-20	NA	109364103	109464156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109364248_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ES.6690.7	chr11	+	3375	13	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	3.20047739494525	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCCATGATTTTATT	323	False	NA	NA	False	AATAAA	-20	NA	109364107	109464156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195_109369336_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426179_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ES.6690.8	chr11	+	381	2	NNC	ENSMUSG00000020604.14	novel	430	4	NA	NA	-84	-11279	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATGTGTATTGATGTT	331	False	NA	NA	False	TTTAAA	-19	NA	109364115	109369444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109369195
ES.6690.9	chr11	+	3702	3	NNC	ENSMUSG00000020604.14	novel	3273	14	NA	NA	-78	7477	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGGCTACTTCCTAG	337	False	NA	NA	False	AATACA	-21	NA	109364121	109388302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109364248_109380593_109381477_109385609
ES.6691.1	chr11	+	2837	1	Antisense	novelGene_ENSMUSG00000041895.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGAGGC	7159	False	NA	NA	False	GATAAA	-43	NA	109495740	109498577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_109495700_109498600
ES.6692.1	chr11	-	4017	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1386	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGATGTTCTTCTGTA	1184	False	NA	-1	True	AATAAA	-21	NA	109365810	109341680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
ES.6692.10	chr11	-	2491	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1382	358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.2632394637403	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTAAACCACTATTTAT	1188	False	NA	NA	False	AATAAA	-16	NA	109365806	109343193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346496_109349302_109349432_109350624_109350769_109354135_109354375_109365661
ES.6692.11	chr11	-	2275	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	139	-60	44	60	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAGGTGAATTATTTT	3013	False	NA	NA	False	ATTAAA	-19	NA	109363981	109343491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
ES.6692.13	chr11	-	2206	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1388	58	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTACAGGTGAATTATT	1182	False	NA	NA	False	ATTAAA	-17	NA	109365812	109343493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
ES.6692.14	chr11	-	3197	2	ISM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	15962	-58	9027	58	3prime_fragment	FALSE	canonical	3	33	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTACAGGTGAATTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	109348158	109343493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_109344221_109345688
ES.6692.2	chr11	-	4321	7	NNC	ENSMUSG00000041920.15	novel	2354	6	NA	NA	55	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.7347810068438	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTGATGTTCTTCTGT	3024	False	NA	-2	True	AATAAA	-20	NA	109363970	109341681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363349_109363597_109363763
ES.6692.4	chr11	-	3975	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	246	-1867	151	-4	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGTCTGATGTTCTTC	3120	False	NA	-5	True	AATAAA	-17	NA	109363874	109341684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
ES.6692.5	chr11	-	3857	5	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1378	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.6169528809455	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAAAGAGTCTGATGTT	1192	False	NA	-9	True	AATAAA	-13	NA	109365802	109341688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109354135_109354375_109365661
ES.6692.6	chr11	-	3029	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1380	889	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGTTTTTTGTTGTT	1190	False	NA	NA	False	NA	NA	NA	109365804	109342662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
ES.6692.7	chr11	-	2995	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	247	-888	152	888	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGGTTTTTTGTTGT	3121	False	NA	NA	False	NA	NA	NA	109363873	109342663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
ES.6692.8	chr11	-	4216	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-2769	643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.6440463206484	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATATTTTTACCTCTGTT	7040	False	NA	NA	False	AATAAA	-25	NA	109359954	109342908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109358378
ES.6692.9	chr11	-	2512	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1388	364	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACTATTTATTATTAA	1182	False	NA	NA	False	AATAAA	-22	NA	109365812	109343187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
ES.6693.1	chr11	-	175	1	Intergenic	novelGene_5434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCCCAGATC	NA	False	NA	NA	False	NA	NA	NA	109370376	109370201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_109370200_109370400
ES.6694.1	chr11	-	5133	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	6	-1801	6	0	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502252	109464156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.10	chr11	-	3339	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	1	-2	1	2	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	109502257	109465955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.11	chr11	-	1762	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	17	1559	17	-1559	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGCCTGTTACTTG	NA	False	NA	NA	False	NA	NA	NA	109502241	109467516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.13	chr11	-	1471	11	ISM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	57	2227	57	-2227	5prime_fragment	FALSE	canonical	1	33	junction_3	25.2841847802139	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAACTTATTGAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	109502201	109468184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.14	chr11	-	1160	8	FSM	ENSMUSG00000041895.16	ENSMUST00000106689.2	1220	8	54	6	54	-6	multi-exon	FALSE	canonical	3	112	junction_2	3.73619909446343	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGCACCTCGAGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	109502204	109472903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.3	chr11	-	2094	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	-45	1	-45	-1	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGTTTACATT	NA	False	NA	-7	True	AATAAA	-14	NA	109502303	109464157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.4	chr11	-	1908	13	NNC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	62	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.2541986930901	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGTTTACATT	NA	False	NA	-7	True	AATAAA	-14	NA	109502196	109464157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470539_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.5	chr11	-	4274	1	NIC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	33827	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGTTTACATT	5342	False	NA	-7	True	AATAAA	-14	NA	109468431	109464157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_109464200_109468400
ES.6694.6	chr11	-	4977	11	NNC	ENSMUSG00000041895.16	novel	3338	12	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_4	47.0817374360802	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGTTTACATT	NA	False	NA	-7	True	AATAAA	-14	NA	109502247	109464157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470539_109473197_109473306_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.8	chr11	-	4560	12	NIC	ENSMUSG00000041895.16	novel	2050	13	NA	NA	57	-13	intron_retention	FALSE	canonical	3	108	junction_1	4.53817599067225	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCAATGCATTTGTGA	NA	False	NA	-19	True	AATAAA	-2	NA	109502201	109464169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6694.9	chr11	-	1876	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	8	166	8	-166	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACTTAGTGGGAAAT	NA	False	NA	NA	False	NA	NA	NA	109502250	109464322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ES.6695.1	chr11	+	3496	12	FSM	ENSMUSG00000020612.17	ENSMUST00000106677.8	3513	12	20	-3	20	3	multi-exon	TRUE	canonical	3	3	junction_1	598.701238977939	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCAGTTTTTCTTCCTT	NA	False	NA	23	True	AATAAA	-28	NA	109540250	109560485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109540354_109541266_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.14	chr11	+	3492	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	18	-151	18	151	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGTGGATTTCAAAACC	NA	False	NA	NA	False	AATACA	-18	NA	109541764	109560633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.16	chr11	+	1465	11	NNC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	26	818	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	482.311403555835	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541772	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553780_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.17	chr11	+	3119	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	26	214	26	-214	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTCTTTGTGGACTC	NA	False	NA	NA	False	TTTAAA	-26	NA	109541772	109560268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.19	chr11	+	3160	10	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	44	junction_2	477.798888422501	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAATCAGTTTTTCTTC	NA	False	NA	20	True	AATAAA	-25	NA	109541774	109560482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.2	chr11	+	1454	11	ISM	ENSMUSG00000020612.17	ENSMUST00000106677.8	3513	12	1110	1862	-60	818	3prime_fragment	FALSE	canonical	3	19	junction_1	469.287342680367	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541340	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.22	chr11	+	4985	10	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	29	4	intron_retention	FALSE	canonical	3	1417	junction_8	115.997126401189	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCAGTTTTTCTTCCTTT	NA	False	NA	24	True	AATAAA	-29	NA	109541775	109560486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.23	chr11	+	4934	9	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_5	527.631603844008	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAATCAGTTTTTCTTC	NA	False	NA	20	True	AATAAA	-25	NA	109541775	109560482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553774_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.24	chr11	+	3312	11	NNC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	29	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	469.85773378758	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAACGAATCAGT	NA	False	NA	12	True	AATAAA	-17	NA	109541775	109560474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109541900_109544604_109544778_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.25	chr11	+	4877	9	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	29	-5	intron_retention	FALSE	canonical	3	1417	junction_7	123.061404896092	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAACGAATCAGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	109541775	109560477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.26	chr11	+	1211	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	29	2119	29	561	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTCAGACATCCTCAAG	NA	False	NA	NA	False	NA	NA	NA	109541775	109558363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.27	chr11	+	4670	8	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	30	818	intron_retention	FALSE	canonical	3	1417	junction_6	122.115702913095	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541776	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.28	chr11	+	3118	10	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	30	818	intron_retention	FALSE	canonical	3	1417	junction_8	115.997126401189	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541776	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.3	chr11	+	3399	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	-33	-7	-33	7	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTTTCTTCCTTTCTT	NA	False	NA	27	True	AATAAA	-32	NA	109541713	109560489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.30	chr11	+	3308	11	NNC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	30	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	482.311403555835	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAATCAGTTTTTCTT	NA	False	NA	19	True	AATAAA	-24	NA	109541776	109560481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553794_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.33	chr11	+	1640	11	NNC	ENSMUSG00000020612.17	novel	376	2	NA	NA	227	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	474.826663109813	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541973	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109542270_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.34	chr11	+	3452	11	NNC	ENSMUSG00000020612.17	novel	376	2	NA	NA	275	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	474.826663109813	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGAATCAGTTTTTCT	NA	False	NA	18	True	AATAAA	-23	NA	109542021	109560480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109542270_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.4	chr11	+	1532	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	-26	1853	-26	827	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGCTTCTCTGTGCAGT	NA	False	NA	36	True	AATAAA	-25	NA	109541720	109558629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.5	chr11	+	2882	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	4	473	4	-473	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATTTGTTTAAATGC	NA	False	NA	17	True	AATAAA	-27	NA	109541750	109560009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.6	chr11	+	4525	10	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	6	-479	intron_retention	FALSE	canonical	3	1417	junction_8	115.997126401189	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATTTGATATTTGTTT	NA	False	NA	11	True	AATAAA	-21	NA	109541752	109560003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.7	chr11	+	4356	9	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	8	-547	intron_retention	FALSE	canonical	3	1417	junction_7	123.061404896092	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTACTTTGTGGTTGGC	NA	False	NA	1	True	ATTAAA	-13	NA	109541754	109559935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6695.8	chr11	+	2041	5	NNC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	725.110465722293	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGAATCAGTTTTTCT	NA	False	NA	18	True	AATAAA	-23	NA	109541756	109560480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109559028
ES.6695.9	chr11	+	2412	10	NIC	ENSMUSG00000020612.17	novel	3359	11	NA	NA	11	818	intron_retention	FALSE	canonical	3	1417	junction_8	117.5901020442	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTGTCACCGCTTCT	NA	False	NA	27	True	AATAAA	-16	NA	109541757	109558620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ES.6696.1	chr11	-	2504	4	Antisense	novelGene_ENSMUSG00000020612.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109558361	109553451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_109555637_109556681_109556811_109557467_109557551_109558254
ES.6697.1	chr11	-	178	1	Intergenic	novelGene_5435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGATGACAAGG	NA	False	NA	NA	False	NA	NA	NA	109677798	109677620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_109677600_109677800
ES.6698.1	chr11	-	512	3	ISM	ENSMUSG00000020617.14	ENSMUST00000020941.11	919	5	30641	4	16693	-4	3prime_fragment	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGTATGGTGGTCCC	NA	False	NA	NA	False	NA	NA	NA	109688207	109682386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_109682621_109684931_109685106_109688103
ES.6699.1	chr11	-	4132	17	NNC	ENSMUSG00000020620.15	novel	5052	38	NA	NA	45021	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.582961190818051	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTCTTTTTATTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	109841548	109823019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109825438_109825548_109825605_109826541_109826622_109827167_109827309_109827522_109827643_109828532_109828628_109828718_109828795_109829264_109829426_109831637_109831730_109832371_109832487_109833062_109833184_109836592_109836685_109837070_109837134_109837890_109838011_109840597_109840712_109840859_109841034_109841454
ES.6699.2	chr11	-	4756	37	NIC	ENSMUSG00000020620.15	novel	5052	38	NA	NA	99	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	0.684934889218775	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCATTTCTGAGTATGA	NA	False	NA	NA	False	AATAAA	-20	NA	109886470	109825090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_109825438_109825548_109825605_109826541_109826622_109827167_109827309_109827522_109827643_109828532_109828628_109828718_109828795_109829264_109829426_109831637_109831730_109832371_109832490_109833062_109833184_109836592_109836685_109837070_109837134_109837890_109838011_109840597_109840712_109840859_109841034_109841454_109841563_109843378_109843517_109844323_109844458_109845860_109846028_109847888_109848085_109852619_109852740_109853406_109853547_109855766_109855858_109857506_109857646_109857854_109857975_109858415_109858592_109859887_109859999_109860643_109860703_109862510_109862680_109864496_109864645_109865815_109865958_109867262_109867490_109868595_109868700_109870687_109870850_109872503_109872606_109886437
ES.6699.3	chr11	-	4402	11	ISM	ENSMUSG00000020620.15	ENSMUST00000106669.3	5052	38	50383	0	50383	0	3prime_fragment	FALSE	canonical	0	0	junction_4	0.489897948556636	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTATTTCCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	109836186	109825098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_109825438_109825548_109825605_109826541_109826622_109827167_109827309_109827522_109827643_109828532_109828628_109828718_109828795_109829264_109829426_109831637_109831730_109832371_109832490_109833062
ES.6699.4	chr11	-	4273	34	NNC	ENSMUSG00000020620.15	novel	7423	39	NA	NA	19286	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	0.655554777357089	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTATTTCCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	109867283	109825098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_109825438_109825548_109825605_109826541_109826622_109827167_109827309_109827522_109827643_109828532_109828628_109828718_109828795_109829264_109829426_109831637_109831730_109832371_109832490_109833062_109833184_109836592_109836631_109837070_109837134_109837890_109838011_109840597_109840712_109840859_109841034_109841454_109841563_109843378_109843517_109844323_109844458_109845860_109846028_109847888_109848085_109852619_109852740_109853406_109853547_109855766_109855858_109857506_109857646_109857854_109857975_109858415_109858592_109859887_109859999_109860643_109860703_109862510_109862680_109864496_109864645_109865333_109865520_109865815_109865958_109867262
ES.67.1	chr1	-	9145	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-8	612	-8	-612	multi-exon	FALSE	canonical	3	96	junction_2	5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTGTGGTTAGTATG	NA	False	NA	NA	False	NA	NA	NA	9818615	9789458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.10	chr1	-	4143	4	NNC	ENSMUSG00000045210.9	novel	9749	3	NA	NA	640	-4570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.7865624998865	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCTGTTCATTCGAA	NA	False	NA	NA	False	AATACA	-21	NA	9817967	9793416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9795022_9795417_9795576_9807190_9807278_9815674
ES.67.11	chr1	-	5259	4	NNC	ENSMUSG00000045210.9	novel	9749	3	NA	NA	-12	-4579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.254833995939	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAATCTCTTCCTGT	NA	False	NA	NA	False	AATACA	-12	NA	9818619	9793425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9795576_9797959_9798037_9807190_9807278_9815674
ES.67.12	chr1	-	5137	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-56	4668	-56	-4668	multi-exon	FALSE	canonical	3	96	junction_2	5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGGCTATCTCTGTTTGC	NA	False	NA	NA	False	AATATA	-20	NA	9818663	9793514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.13	chr1	-	4965	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-31	4815	-31	-4815	multi-exon	FALSE	canonical	3	96	junction_2	5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGTACTGCTCTTGTA	NA	False	NA	NA	False	AGTAAA	-18	NA	9818638	9793661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.14	chr1	-	4052	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-54	5751	-54	-5751	multi-exon	FALSE	canonical	3	96	junction_2	5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTATATCTTGTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	9818661	9794597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.15	chr1	-	165	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	9810975	9810810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9810800_9811000
ES.67.16	chr1	-	4725	1	Genic_Genomic	ENSMUSG00000045210.9	novel	NA	NA	NA	NA	-47	-25083	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTGTATCTGCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	9818654	9813929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_9813900_9818700
ES.67.17	chr1	-	2912	1	Genic_Genomic	ENSMUSG00000045210.9	novel	NA	NA	NA	NA	-12	-26861	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTCCTTGTGTCTTTTA	NA	False	NA	NA	False	AAGAAA	-1	NA	9818619	9815707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_9815700_9818600
ES.67.2	chr1	-	3534	1	ISM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	25361	866	25361	-866	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCAACTGTCCACTTTG	6116	False	NA	NA	False	AGTAAA	-15	NA	9793246	9789712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_9789700_9793200
ES.67.3	chr1	-	4834	1	ISM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	23614	1313	23614	-1313	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCCAGGCAGTGGTGGC	4369	False	NA	NA	False	AATAAA	-16	NA	9794993	9790159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_9790200_9795000
ES.67.4	chr1	-	8020	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-54	1783	-54	-1783	multi-exon	FALSE	canonical	3	96	junction_2	5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGGTTTGTTTGACTG	NA	False	NA	1	True	AATAAA	-22	NA	9818661	9790629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.5	chr1	-	7891	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-53	1911	-53	-1911	multi-exon	FALSE	canonical	3	96	junction_2	5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGTATCAATTACTA	NA	False	NA	0	True	NA	NA	NA	9818660	9790757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.6	chr1	-	5685	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-12	4076	-12	-4076	multi-exon	FALSE	canonical	3	96	junction_2	5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGATGCTCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	9818619	9792922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.7	chr1	-	5462	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-9	4296	-9	-4296	multi-exon	FALSE	canonical	3	96	junction_2	5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTCATATACTAATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	9818616	9793142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.8	chr1	-	5289	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	-60	4520	-60	-4520	multi-exon	FALSE	canonical	3	96	junction_2	5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGAGGTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	9818667	9793366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_9795576_9807190_9807278_9815674
ES.67.9	chr1	-	2890	4	NNC	ENSMUSG00000045210.9	novel	9749	3	NA	NA	2263	-4548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.7865624998865	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTACTTGAACTTT	NA	False	NA	NA	False	AATACA	-43	NA	9816344	9793394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_9794565_9794612_9795576_9807190_9807278_9815674
ES.670.1	chr1	+	1184	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-46	1554	-46	232	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTCTCTAGTTCATGT	NA	False	NA	NA	False	NA	NA	NA	66739943	66757410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.10	chr1	+	2819	7	NIC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	-3	-297	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	380.593396334373	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66739986	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740577_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.11	chr1	+	2705	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-1	-12	-1	12	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATCTAGGATGCCTG	NA	False	NA	17	True	ATTAAA	-24	NA	66739988	66758976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.12	chr1	+	3529	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-1	-836	-1	836	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGATGCATGTGGGC	NA	False	NA	NA	False	AAAAAG	-25	NA	66739988	66759800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.13	chr1	+	1310	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	-1	1404	-1	382	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTATAAAAAACAATG	NA	False	NA	-13	True	NA	NA	NA	66739988	66757560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.14	chr1	+	1289	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-1	1404	-1	382	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTATAAAAAACAATG	NA	False	NA	-13	True	NA	NA	NA	66739988	66757560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.15	chr1	+	3141	7	NNC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	-1	-305	intron_retention	FALSE	canonical	0	0	junction_1	385.244799517859	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAAGCAAAAGTTT	NA	False	NA	5	True	NA	NA	NA	66739988	66758659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740808_66742231_66742365_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.16	chr1	+	887	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	3	1802	3	-16	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAGAGGTTAGAAATAAC	NA	False	NA	NA	False	ATTAAA	-18	NA	66739992	66757162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.17	chr1	+	15667	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	6	-12981	6	12981	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAGATTAGATTTTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	66739995	66771945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.18	chr1	+	2407	6	NNC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	8	-297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	376.387353666406	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66739997	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66745604_66745685_66753735_66753876_66754255_66754407_66755117_66755205_66756908
ES.670.19	chr1	+	2705	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	10	-2	10	2	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGAATTCTTGATCT	NA	False	NA	7	True	ATTAAA	-14	NA	66739999	66758966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.2	chr1	+	2442	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-43	293	-43	-293	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTGTAAGTATTGAA	NA	False	NA	17	True	NA	NA	NA	66739946	66758671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.20	chr1	+	6696	2	ISM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	11	6851	11	-2240	5prime_fragment	FALSE	canonical	3	708	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTACTCCCCGCATTG	NA	False	NA	NA	False	NA	NA	NA	66740000	66752113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_66740188_66745604
ES.670.21	chr1	+	2772	6	NIC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	11	-298	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	327.748928297256	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAAAAGTTTGTAAGTA	NA	False	NA	12	True	NA	NA	NA	66740000	66758666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740577_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.22	chr1	+	2607	8	NNC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	11	8922	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	361.329178880151	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATGGTTCTTAAAGTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	66740000	66767886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912_66757064_66764990_66765019_66766087
ES.670.24	chr1	+	3160	5	NNC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	-38	-297	intron_retention	FALSE	non_canonical	0	0	junction_3	329.982196489447	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66740027	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66745604_66745685_66753735_66754504_66754807_66755205_66756912
ES.670.25	chr1	+	10414	6	NNC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	-38	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	324.775368524154	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGATCTAGGATGCC	NA	False	NA	15	True	ATTAAA	-22	NA	66740027	66758974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66745604_66753435_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.26	chr1	+	2768	5	NIC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	-38	201	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	337.078996675853	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAGTTTTAAATGTATCA	NA	False	NA	NA	False	AGTAAA	-20	NA	66740027	66759165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66756912
ES.670.27	chr1	+	8393	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	38	-5739	-38	5739	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCTTAACAGTGTGA	NA	False	NA	NA	False	AATAAA	-28	NA	66740027	66764703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.28	chr1	+	2595	3	NIC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	-38	-305	intron_retention	FALSE	canonical	0	0	junction_2	15	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAAGCAAAAGTTT	NA	False	NA	5	True	NA	NA	NA	66740027	66758659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740796_66745604_66745685_66756912
ES.670.29	chr1	+	6505	7	NNC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-37	5739	intron_retention	FALSE	non_canonical	1	4	junction_6	371.464070342685	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCTTAACAGTGTGA	NA	False	NA	NA	False	AATAAA	-28	NA	66740028	66764703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912_66757064_66758939
ES.670.3	chr1	+	1645	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-19	1066	-19	720	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGAAGGCTTATAGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	66739970	66757898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.30	chr1	+	978	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	40	1674	-36	112	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAAATGTGTCTTAATG	NA	False	NA	NA	False	NA	NA	NA	66740029	66757290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.31	chr1	+	2287	5	NNC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	-36	-305	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	362.663325275661	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAAGCAAAAGTTT	NA	False	NA	5	True	NA	NA	NA	66740029	66758659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66753715_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.32	chr1	+	2988	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	40	-336	-36	336	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAATTTCCATAAATAAC	NA	False	NA	NA	False	AATAAA	-22	NA	66740029	66759300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.33	chr1	+	2480	7	NNC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	-27	-305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.244799517859	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAAGCAAAAGTTT	NA	False	NA	5	True	NA	NA	NA	66740038	66758659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740188_66740434_66740577_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.34	chr1	+	9089	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	53	-6450	-23	6450	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGGGAGCTCCTGAG	NA	False	NA	NA	False	TATAAA	-29	NA	66740042	66765414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.35	chr1	+	3999	6	NNC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-23	-295	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	386.793484950303	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTTGTAAGTATTG	NA	False	NA	15	True	NA	NA	NA	66740042	66758669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755362_66755403
ES.670.36	chr1	+	999	1	NIC	ENSMUSG00000026005.16	novel	781	4	NA	NA	-12	-13301	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCAAAATCTGTTTG	NA	False	NA	NA	False	AATAAA	-9	NA	66740053	66741052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740100_66741100
ES.670.37	chr1	+	4598	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-5	1988	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTTACCTTGTCTTC	NA	False	NA	NA	False	AATAAA	-35	NA	66740060	66760952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.38	chr1	+	10858	3	NIC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	5322	-300	intron_retention	FALSE	canonical	3	817	junction_2	12	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGCAAAAGTTTGTAAG	NA	False	NA	10	True	NA	NA	NA	66745387	66758664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66754407_66755117_66755205_66756912
ES.670.39	chr1	+	3475	1	NIC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	15127	-297	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66755192	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66755200_66758700
ES.670.4	chr1	+	2392	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	-8	-297	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66739981	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.40	chr1	+	5665	1	Antisense	novelGene_ENSMUSG00000026004.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAATTACCCATTACT	NA	False	NA	NA	False	AATAAA	-32	NA	66760014	66765679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_66760000_66765700
ES.670.41	chr1	+	5599	1	Antisense	novelGene_ENSMUSG00000026004.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATTCCATTGCAGTAT	NA	False	NA	NA	False	AATACA	-16	NA	66766166	66771765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_66766200_66771800
ES.670.5	chr1	+	5673	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-7	-2974	-7	2974	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGACTTTGCATAGTATT	NA	False	NA	NA	False	ACTAAA	-11	NA	66739982	66761938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.6	chr1	+	2423	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	-7	297	-7	-297	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAAGTTTGTAAGTAT	NA	False	NA	13	True	NA	NA	NA	66739982	66758667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.7	chr1	+	1589	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	-7	1131	-7	655	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGCTTATGTATATCGAA	NA	False	NA	NA	False	AATAAA	-23	NA	66739982	66757833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.8	chr1	+	4683	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	-5	-1986	-5	1986	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGGCTTACCTTGTCT	NA	False	NA	NA	False	AATAAA	-33	NA	66739984	66760950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ES.670.9	chr1	+	2859	5	NIC	ENSMUSG00000026005.16	novel	2724	7	NA	NA	-4	-305	intron_retention	FALSE	canonical	0	0	junction_2	407.22659539868	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAAGCAAAAGTTT	NA	False	NA	5	True	NA	NA	NA	66739985	66758659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_66740796_66745604_66745685_66754271_66754407_66755117_66755205_66756912
ES.6700.1	chr11	-	179	1	Intergenic	novelGene_5436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	110016407	110016228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_110016200_110016400
ES.6701.1	chr11	-	157	1	Intergenic	novelGene_5437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110084030	110083873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_110083900_110084000
ES.6702.1	chr11	-	8175	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGTTTGTATACCAAA	NA	False	NA	NA	False	AATAAA	-27	NA	110228551	110160188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
ES.6702.10	chr11	-	1931	11	NIC	ENSMUSG00000018800.15	novel	3829	28	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	5.40462764674866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-18	NA	110228520	110199898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
ES.6702.11	chr11	-	2726	3	NIC	ENSMUSG00000018800.15	novel	3829	28	NA	NA	8	-21	intron_retention	FALSE	canonical	3	14	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATATTCTTCTCCCTCC	NA	False	NA	NA	False	ATTAAA	-21	NA	110228496	110216342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_110218763_110219962_110220083_110228310
ES.6702.2	chr11	-	8196	39	NNC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	5.37776534545747	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGACTTCAGTTTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	110228473	110160194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187277_110187464_110188861_110189044_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
ES.6702.3	chr11	-	8249	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	-18	0	-18	0	multi-exon	FALSE	canonical	1	7	junction_11	4.33987183389395	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGACTTCAGTTTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	110228522	110160194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
ES.6702.7	chr11	-	5266	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	16	-2878	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCATGTTTATATCTG	NA	False	NA	NA	False	AATAAA	-17	NA	110228526	110163072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
ES.6702.8	chr11	-	5311	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	-32	2952	6	-2952	multi-exon	FALSE	canonical	1	7	junction_11	4.33987183389395	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAAGTCCTTAATTA	NA	False	NA	NA	False	ATTAAA	-22	NA	110228536	110163146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
ES.6703.1	chr11	+	2132	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	-10	-54	-10	54	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTGCCTATCTCTTT	NA	False	NA	68	True	AATGAA	-25	NA	110289937	110404521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ES.6703.2	chr11	+	2003	12	FSM	ENSMUSG00000020623.12	ENSMUST00000146084.8	1869	12	-137	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_4	29.7790763528648	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGGCATAGTATTA	NA	False	NA	11	True	AGTAAA	-21	NA	110289947	110404464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381640_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ES.6703.3	chr11	+	1546	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	2	520	2	-520	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACGGGTGGGTCCTCGA	NA	False	NA	NA	False	ATTAAA	-15	NA	110289949	110403947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ES.6703.4	chr11	+	4626	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	2	-2560	2	2560	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACTTGGAGAGACATTG	NA	False	NA	NA	False	NA	NA	NA	110289949	110407027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ES.6703.5	chr11	+	2013	11	NIC	ENSMUSG00000020623.12	novel	2068	12	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	30.8980581914139	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGGCATAGTATTA	NA	False	NA	11	True	AGTAAA	-21	NA	110289953	110404464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110403614
ES.6703.6	chr11	+	1323	1	NIC	ENSMUSG00000020623.12	novel	2068	12	NA	NA	16	-97466	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGCATGGAGAAACTGC	NA	False	NA	NA	False	NA	NA	NA	110289963	110291286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_110290000_110291300
ES.6703.7	chr11	+	11398	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	35	-9365	35	-2516	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTGGGTCAGAATAATC	NA	False	NA	8	True	AATAAA	-16	NA	110289982	110413832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ES.6704.1	chr11	-	180	1	Intergenic	novelGene_5438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCATAGACATAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	110297992	110297812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_110297800_110298000
ES.6705.1	chr11	-	6240	1	Antisense	novelGene_ENSMUSG00000020623.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTCTGTAAGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	110393799	110387559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_110387600_110393800
ES.6706.1	chr11	+	174	1	Intergenic	novelGene_5439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGTACCTGCCAT	NA	False	NA	NA	False	NA	NA	NA	110514397	110514571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_110514400_110514600
ES.6707.1	chr11	-	155	1	Intergenic	novelGene_5440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110886497	110886342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_110886300_110886500
ES.6708.1	chr11	+	5286	1	Intergenic	novelGene_5441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTTTGGTCTGTGGTG	1166	False	NA	NA	False	NA	NA	NA	111075100	111080386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_111075100_111080400
ES.6709.1	chr11	-	175	1	Intergenic	novelGene_5442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTAAATTAAAC	NA	False	NA	NA	False	NA	NA	NA	111816226	111816051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_111816100_111816200
ES.671.1	chr1	+	7157	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTTTTCTTTTTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	66780085	66787242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_66780100_66787200
ES.671.2	chr1	+	5956	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCATTTCACCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	66786101	66792057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_66786100_66792100
ES.671.3	chr1	+	3025	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTTTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	66788344	66791369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_66788300_66791400
ES.6710.1	chr11	+	179	1	Intergenic	novelGene_5443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACAGTTGTC	NA	False	NA	NA	False	NA	NA	NA	112636682	112636861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_112636700_112636900
ES.6711.1	chr11	+	4121	3	FSM	ENSMUSG00000000567.6	ENSMUST00000000579.3	4135	3	3	11	3	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACAGCCCCTTTGACT	NA	False	NA	NA	False	AATAAA	-18	NA	112673052	112678575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_112673842_112674634_112674889_112675497
ES.6711.2	chr11	+	2317	3	FSM	ENSMUSG00000000567.6	ENSMUST00000000579.3	4135	3	3	1815	3	-1815	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTTTAGTATGTACT	NA	False	NA	NA	False	ATTAAA	-39	NA	112673052	112676771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_112673842_112674634_112674889_112675497
ES.6712.1	chr11	+	373	1	Intergenic	novelGene_5445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATACCAACAAATGACAA	NA	False	NA	NA	False	NA	NA	NA	113087972	113088345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113088000_113088300
ES.6713.1	chr11	-	1168	6	NNC	ENSMUSG00000087259.8	novel	1436	3	NA	NA	-2	175449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.4	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTACTCCACTGTATC	NA	False	NA	NA	False	AATAAA	-15	NA	113092666	112759271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_112759510_112860721_112860872_112863513_112863648_112872253_112872305_112958167_112958213_113092116
ES.6713.2	chr11	-	1893	3	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-45	-11	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCTCTGTAAATGTTG	NA	False	NA	NA	False	TATAAA	-12	NA	113092709	112934731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_112935987_112958167_112958213_113092116
ES.6713.3	chr11	-	1805	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCCTCTGTAAATGTTG	NA	False	NA	NA	False	TATAAA	-12	NA	113092666	112934731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_112935987_113092116
ES.6713.4	chr11	-	1593	2	NNC	ENSMUSG00000087259.8	novel	1861	3	NA	NA	-1	-222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGTGTGTTTGTATGG	NA	False	NA	NA	False	TATAAA	-24	NA	113092665	112934942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_112935987_113092116
ES.6713.5	chr11	-	2628	1	Intergenic	novelGene_5444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCAAGAAGGAGGGCGT	NA	False	NA	NA	False	NA	NA	NA	113026279	113023651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113023700_113026300
ES.6714.1	chr11	+	11051	1	Intergenic	novelGene_5448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAAACAA	NA	False	NA	NA	False	AAGAAA	-7	NA	113302365	113313416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113302400_113313400
ES.6714.2	chr11	+	3462	1	Intergenic	novelGene_5449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTAGCAGATACTTCCA	NA	False	NA	NA	False	NA	NA	NA	113312657	113316119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113312700_113316100
ES.6715.1	chr11	+	1971	1	Intergenic	novelGene_5451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAAAACTTTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	113368359	113370330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113368400_113370300
ES.6716.1	chr11	+	188	1	Intergenic	novelGene_5452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	113371831	113372019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113371800_113372000
ES.6717.1	chr11	+	225	2	Antisense	novelGene_ENSMUSG00000041654.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATTATCTGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	113459156	113461483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_113459272_113461373
ES.6718.1	chr11	+	175	1	Intergenic	novelGene_5453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	113478211	113478386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113478200_113478400
ES.6719.1	chr11	+	184	1	Intergenic	novelGene_5454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	113485432	113485616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113485400_113485600
ES.672.1	chr1	+	4596	2	Antisense	novelGene_ENSMUSG00000026004.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTAAATGTAAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	66796694	66801467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_66796769_66796945
ES.6720.1	chr11	+	2328	3	FSM	ENSMUSG00000047904.7	ENSMUST00000106630.2	1537	3	-670	-121	-536	-12	multi-exon	FALSE	canonical	0	0	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTGAAAGT	NA	False	NA	NA	False	NA	NA	NA	113509631	113516842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113510449_113514992_113516076_113516414
ES.6720.2	chr11	+	2307	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	-164	0	-164	0	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAGTAAGGTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	113510003	113516854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113510449_113514992
ES.6720.3	chr11	+	3533	4	NNC	ENSMUSG00000047904.7	novel	1537	3	NA	NA	1	2309	intron_retention	FALSE	non_canonical	0	0	junction_2	3.77123616632825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGCTAAAGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	113510168	113519163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113510449_113514992_113517102_113517725_113517901_113518194
ES.6721.1	chr11	+	3984	15	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	-806	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.481557067234	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113539188	113553227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113539278_113539488_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.10	chr11	+	4327	11	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	202	0	intron_retention	FALSE	canonical	3	202	junction_2	33.1977408869941	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540355	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113548363_113549304_113549433_113550094_113550204_113551768
ES.6721.11	chr11	+	4094	12	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	369	547	210	0	intron_retention	FALSE	canonical	3	202	junction_2	31.7185452961273	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540363	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768
ES.6721.12	chr11	+	3465	13	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	211	0	intron_retention	FALSE	canonical	1	2	junction_5	81.7465595606323	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540364	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544980_113545793_113546005_113546685_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.13	chr11	+	3105	13	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	211	0	intron_retention	FALSE	canonical	3	202	junction_2	33.6512959961756	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540364	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113552045_113553032
ES.6721.14	chr11	+	5172	11	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	212	0	intron_retention	FALSE	canonical	3	202	junction_2	36.6225340466768	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540365	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113549433_113550094_113550204_113551768_113551879_113551965
ES.6721.15	chr11	+	4502	11	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	212	0	intron_retention	FALSE	canonical	3	202	junction_2	36.0754764348303	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTGCCTCTGCTCCTG	NA	False	NA	13	True	AATAAA	-21	NA	113540365	113553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113546005_113546685_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.16	chr11	+	3044	14	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	212	214	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	77.2696040883887	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTACGTTGTGAACTC	NA	False	NA	NA	False	TTTAAA	-28	NA	113540365	113552705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113552484
ES.6721.18	chr11	+	4075	14	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.1056029174642	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTGCCTCTGCTCCTG	NA	False	NA	13	True	AATAAA	-21	NA	113540368	113553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113543667_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.19	chr11	+	3976	13	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	218	0	intron_retention	FALSE	canonical	2	5	junction_11	78.8305143963935	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTGCCTCTGCTCCTG	NA	False	NA	13	True	AATAAA	-21	NA	113540371	113553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551790_113551879_113551965
ES.6721.2	chr11	+	3007	14	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.2804176034954	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGTGCCTCTGCTCCTG	NA	False	NA	13	True	AATAAA	-21	NA	113540336	113553225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547866_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.20	chr11	+	2822	14	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	223	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	79.2804176034954	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540376	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547291_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.23	chr11	+	1269	7	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	227	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	102.475471319834	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540380	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544806_113551961_113552045_113553032
ES.6721.25	chr11	+	3908	13	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	229	1	intron_retention	FALSE	canonical	3	202	junction_2	34.7091086347982	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTCTGCTCCTGTT	NA	False	NA	15	True	AATAAA	-23	NA	113540382	113553227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.3	chr11	+	3023	14	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	184	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	77.9692702325199	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540337	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551790_113551879_113551965_113552045_113553032
ES.6721.4	chr11	+	3384	13	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	199	0	intron_retention	FALSE	canonical	3	202	junction_2	35.4502781684745	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540352	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.6	chr11	+	3581	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	358	-4	199	4	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGAGGCTCTTTACA	NA	False	NA	NA	False	ATTAAA	-19	NA	113540352	113553777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.7	chr11	+	3024	14	NNC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.3665751714024	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540352	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113540702_113542676_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.8	chr11	+	2029	12	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	200	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	84.0024596255401	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540353	113553226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6721.9	chr11	+	3374	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	360	201	201	-201	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCCGAGTGGACGGCTG	NA	False	NA	NA	False	AATAAA	-34	NA	113540354	113553572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ES.6722.1	chr11	+	172	1	Intergenic	novelGene_5455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAATTAAATT	NA	False	NA	NA	False	NA	NA	NA	113561657	113561829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113561700_113561800
ES.6723.1	chr11	+	254	1	NIC	ENSMUSG00000083339.2	novel	565	2	NA	NA	309	-239	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAGCACACAAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	113569664	113569918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113569700_113569900
ES.6724.1	chr11	+	3051	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	-990	1	-955	-1	multi-exon	TRUE	canonical	3	249	junction_1	30.335622624235	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113574282	113585472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ES.6724.10	chr11	+	4566	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	2	-1	intron_retention	FALSE	canonical	3	249	junction_1	34.8361242901037	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575274	113585472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575538_113578599_113582660_113583220_113583329_113585337
ES.6724.11	chr11	+	2664	5	NNC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	14	4516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.886488904736	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGCTTTCTGGTGTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	113575286	113589989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113589237
ES.6724.12	chr11	+	2037	5	NNC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	129.886488904736	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113575286	113585470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585345
ES.6724.13	chr11	+	3947	3	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	18	-1	intron_retention	FALSE	canonical	3	28	junction_2	110.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575290	113585472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575538_113578599_113580048_113583220
ES.6724.14	chr11	+	4047	4	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	19	5	19	-5	intron_retention	FALSE	canonical	3	249	junction_1	34.322004603461	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACTTTTCTTCTTCTTT	NA	False	NA	10	True	AATAAA	-11	NA	113575291	113585468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220
ES.6724.15	chr11	+	2217	6	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	23	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	139.080696000559	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113575295	113585470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575637_113576015_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ES.6724.16	chr11	+	1904	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	289	3	254	-3	multi-exon	FALSE	canonical	3	41	junction_1	114.630929508575	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113575526	113585470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ES.6724.2	chr11	+	3612	5	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	-955	0	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113574282	113585473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ES.6724.3	chr11	+	2561	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	28	junction_2	114.479498407163	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575228	113585473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113576098_113578599_113580048_113583220_113583329_113585337
ES.6724.4	chr11	+	1990	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575238	113585472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
ES.6724.5	chr11	+	4667	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	0	-1	intron_retention	FALSE	canonical	3	41	junction_1	126.692102709241	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTCTTCTTTTTTT	NA	False	NA	14	True	AATAAA	-15	NA	113575272	113585472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575637_113578599_113582660_113583220_113583329_113585337
ES.6724.6	chr11	+	5126	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	43	junction_1	125.76432986609	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTTCTTCTTCTTTTTT	NA	False	NA	13	True	AATAAA	-14	NA	113575273	113585471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113576098_113578599_113582660_113583220_113583329_113585337
ES.6724.7	chr11	+	2163	5	NNC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	1	4796	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	129.465004924111	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	False	NA	NA	False	CATAAA	-16	NA	113575273	113590269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113590031
ES.6724.8	chr11	+	2052	4	NIC	ENSMUSG00000041623.18	novel	2196	5	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	114.909626325309	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTTTCTTCTTCTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	113575273	113585470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_113575637_113578599_113580048_113583220_113583329_113585337
ES.6724.9	chr11	+	4268	6	NNC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	1	12407	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	145.018067839838	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATCTTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	113575273	113597880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113590031_113590256_113595761
ES.6725.1	chr11	-	3571	10	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26041	928	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	188.348639168281	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTATTGTTTTATG	NA	False	NA	4	True	AAGAAA	-34	NA	113482646	113134750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
ES.6725.10	chr11	-	2701	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	-37	0	-14	0	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7732	False	NA	-2	True	AATAAA	-19	NA	113456619	113135678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.13	chr11	-	2774	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	189.217361782686	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7775	False	NA	-3	True	AATAAA	-18	NA	113456576	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113187107_113187225_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.14	chr11	-	2846	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	207.953095673039	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7790	False	NA	-3	True	AATAAA	-18	NA	113456561	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113187107_113187225_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
ES.6725.15	chr11	-	2838	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	213.827056286149	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7791	False	NA	-3	True	AATAAA	-18	NA	113456560	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113455512_113455689_113456501
ES.6725.16	chr11	-	5018	4	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	262023	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	215.422582123808	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7281	False	NA	-3	True	AATAAA	-18	NA	113194559	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113191441
ES.6725.17	chr11	-	2808	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.137222378063	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7732	False	NA	-3	True	AATAAA	-18	NA	113456619	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
ES.6725.18	chr11	-	3881	9	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	3	-1	intron_retention	FALSE	canonical	3	152	junction_8	139.710358867909	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTCCGTGCGAT	7772	False	NA	-3	True	AATAAA	-18	NA	113456579	113135679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
ES.6725.19	chr11	-	2537	9	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-2	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	159.835853299565	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	7744	False	NA	-4	True	AATAAA	-17	NA	113456607	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.20	chr11	-	2515	9	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.659103146853	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	7754	False	NA	-4	True	AATAAA	-17	NA	113456597	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
ES.6725.21	chr11	-	2812	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26426	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.740434823617	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113483031	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607_113482759_113482972
ES.6725.22	chr11	-	2746	10	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	159.75845965738	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	7775	False	NA	-4	True	AATAAA	-17	NA	113456576	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
ES.6725.23	chr11	-	2692	10	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	-26116	-2	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_9	159.268078997815	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113482721	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
ES.6725.24	chr11	-	2644	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-4628	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	195.001487806923	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	3118	False	NA	-4	True	AATAAA	-17	NA	113461233	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113461191
ES.6725.25	chr11	-	2662	9	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26104	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	217.196879293879	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113482709	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113452831_113452948_113482607
ES.6725.27	chr11	-	2917	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-3491	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	186.593107199384	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	4255	False	NA	-4	True	AATAAA	-17	NA	113460096	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113459778
ES.6725.28	chr11	-	2684	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	3156	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	195.001487806923	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113453426	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113453341
ES.6725.29	chr11	-	3967	9	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	6	-2	intron_retention	FALSE	canonical	3	29	junction_8	169.103518591424	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	7775	False	NA	-4	True	AATAAA	-17	NA	113456576	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
ES.6725.3	chr11	-	3601	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-7	-906	2	906	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCTTGGTTCATAA	7759	False	NA	-18	True	AAGAAA	-12	NA	113456592	113134772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.30	chr11	-	2657	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-26041	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	193.531496144684	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	False	NA	-4	True	AATAAA	-17	NA	113482646	113135680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113476290_113476328_113482607
ES.6725.31	chr11	-	2660	9	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	193.3874026404	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGCTGTGTTCCGTGCG	7752	False	NA	-5	True	AATAAA	-16	NA	113456599	113135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113452831_113452951_113456501
ES.6725.32	chr11	-	3862	9	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	-26060	-3	intron_retention	FALSE	canonical	3	33	junction_8	168.073644572848	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGCTGTGTTCCGTGCG	NA	False	NA	-5	True	AATAAA	-16	NA	113482665	113135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
ES.6725.33	chr11	-	2504	9	NIC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26064	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	223.427281234857	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGCTGTGTTCCGTGCG	NA	False	NA	-5	True	AATAAA	-16	NA	113482669	113135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113137322_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
ES.6725.34	chr11	-	2963	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	33059	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	209.740434823617	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGCTGTGTTCCGTGCG	6718	False	NA	-5	True	AATAAA	-16	NA	113507837	113135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607_113482755_113507622
ES.6725.35	chr11	-	3653	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_9	165.966826969491	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGCTGTGTTCCGTGCG	7766	False	NA	-5	True	AATAAA	-16	NA	113456585	113135681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113455512
ES.6725.37	chr11	-	4779	1	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	316121	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCTGTGTTCCGTGC	NA	False	NA	-6	True	AATAAA	-15	NA	113140461	113135682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113135700_113140500
ES.6725.38	chr11	-	1441	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-49	-1417	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	195.277853326997	434	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGACGCTGGTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	113540954	113137095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113453800_113453889_113540767
ES.6725.39	chr11	-	1253	9	ISM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-21	2680	-1	-2680	5prime_fragment	FALSE	canonical	0	0	junction_4	163.816780276014	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTGGCATAAGGCAGG	7745	False	NA	NA	False	AATAAA	-19	NA	113456606	113138358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.4	chr11	-	3341	2	NNC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	317895	906	intron_retention	FALSE	canonical	0	0	junction_1	0	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATCTTGGTTCATAA	NA	False	NA	-18	True	AAGAAA	-12	NA	113138687	113134772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113134942_113135515
ES.6725.41	chr11	-	1740	1	Intergenic	novelGene_5446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCCAAAACCTGTCCT	7389	False	NA	NA	False	NA	NA	NA	113190099	113188359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113188400_113190100
ES.6725.42	chr11	-	2542	1	Intergenic	novelGene_5447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGGTGGAGAGCAATT	7281	False	NA	NA	False	NA	NA	NA	113194559	113192017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113192000_113194600
ES.6725.43	chr11	-	2224	2	Intergenic	novelGene_5450	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTAAAAAAAATAAAATCA	NA	False	NA	NA	False	AAAAAG	-12	NA	113329452	113327192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113327837_113327872
ES.6725.44	chr11	-	1041	5	NNC	ENSMUSG00000041654.16	novel	485	5	NA	NA	3	16555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.464596874305	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCATGGACTGCCTCT	7760	False	NA	NA	False	NA	NA	NA	113456591	113397857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113398492_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6725.6	chr11	-	2887	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	225.954176770424	444	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCGTGCGATCTT	NA	False	NA	0	True	AATAAA	-21	NA	113540899	113135676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450374_113452831_113452951_113482607_113482759_113540767
ES.6725.7	chr11	-	2726	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	-37	-1	-17	1	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTCCGTGCGATCT	7729	False	NA	-1	True	AATAAA	-20	NA	113456622	113135677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ES.6726.1	chr11	-	3748	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	21904	3188	intron_retention	FALSE	non_canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAAGCATGGAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	113553077	113548956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113550499_113550675_113551309_113551504
ES.6726.2	chr11	-	2643	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	-18	-6	-18	6	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTGGTTGGTTATTTCT	NA	False	NA	-2	True	ATTAAA	-30	NA	113574999	113552138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113554370_113568129_113568230_113574687
ES.6726.3	chr11	-	2642	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	250	-1	intron_retention	FALSE	canonical	3	48	junction_2	675	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCCTAATTGGTTGGT	NA	False	NA	-9	True	ATTAAA	-23	NA	113574731	113552145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113554370_113568129_113568230_113574413
ES.6726.4	chr11	-	1478	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	-371	1512	-371	-1512	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCCGTCCTACCTCTTA	NA	False	NA	60	True	AATATA	-29	NA	113575352	113553656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113554370_113568129_113568230_113574687
ES.6726.5	chr11	-	1060	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	241	-1592	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	675	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTAGTTTCCATGGGG	NA	False	NA	-20	True	AATAAA	-10	NA	113574740	113553736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113554370_113568129_113568230_113574413
ES.6726.6	chr11	-	946	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	91	-1596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	699	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATATCTAGTTTCCAT	NA	False	NA	-24	True	AATAAA	-6	NA	113574890	113553740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113554370_113568129_113568244_113574687
ES.6726.7	chr11	-	771	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	-12	1860	-12	-1860	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGTGTGAGTGCCGGG	NA	False	NA	0	True	NA	NA	NA	113574993	113554004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113554370_113568129_113568230_113574687
ES.6727.1	chr11	-	186	1	Intergenic	novelGene_5456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGTTATAAATTGTAATA	NA	False	NA	NA	False	NA	NA	NA	113577236	113577050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113577000_113577200
ES.6728.1	chr11	-	3125	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-139	8795	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	96.1508169067571	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGACTTCTCTTCCAT	NA	False	NA	NA	False	ATTAAA	-11	NA	113600491	113580202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113582732_113589410_113589493_113590661_113590740_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600449
ES.6728.10	chr11	-	1099	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.2348378115474	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600839	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589280_113589410_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600645
ES.6728.11	chr11	-	1394	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.2723564542463	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600440	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
ES.6728.13	chr11	-	1143	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	63.6046462171449	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600389	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589383_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.14	chr11	-	2512	3	NNC	ENSMUSG00000018727.20	novel	1235	7	NA	NA	5903	0	intron_retention	FALSE	canonical	0	0	junction_2	103.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113593890	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589493_113590661_113590809_113592020
ES.6728.15	chr11	-	1944	6	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	9	0	intron_retention	FALSE	canonical	3	130	junction_2	31.5683385688889	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113599784	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113594193_113597242_113597396_113599629
ES.6728.17	chr11	-	1554	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	-179	0	-179	0	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600531	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
ES.6728.18	chr11	-	2163	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-94	-1	intron_retention	FALSE	canonical	3	30	junction_2	75.2050899577652	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600446	113588998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113594193_113597242_113597396_113599629_113599681_113600053
ES.6728.19	chr11	-	1267	7	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-43	-1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	81.2966105621193	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600395	113588998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589383_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
ES.6728.2	chr11	-	1188	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	71	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	68.150493732022	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGATTCCTTTTCTTGA	NA	False	NA	-5	True	AATATA	-20	NA	113600275	113588993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600167
ES.6728.20	chr11	-	1130	6	NIC	ENSMUSG00000018727.20	novel	1235	7	NA	NA	-52	-1	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	79.7235222503371	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600895	113588998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113599629_113599681_113600647
ES.6728.21	chr11	-	1185	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	86	-1	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	55.2692851188707	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600757	113588998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
ES.6728.22	chr11	-	1116	8	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	24	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	63.2926471533105	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCATTGATTCCTTTT	NA	False	NA	-10	True	AATATA	-15	NA	113600322	113588998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.24	chr11	-	3038	5	NNC	ENSMUSG00000018727.20	novel	1235	7	NA	NA	-92	-1995	intron_retention	FALSE	non_canonical	0	0	junction_2	87.6737560504853	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTCTGGGAACAGTAAA	NA	False	NA	NA	False	NA	NA	NA	113600444	113590992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113593336_113594096_113594193_113597238_113597396_113599629_113599681_113600053
ES.6728.25	chr11	-	4955	1	NIC	ENSMUSG00000018727.20	novel	1123	7	NA	NA	3842	-1999	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTCTGGGAACAG	NA	False	NA	NA	False	NA	NA	NA	113595951	113590996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113591000_113596000
ES.6728.26	chr11	-	2873	5	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-94	-1999	intron_retention	FALSE	canonical	3	9	junction_1	82.6630963610728	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATATTCTGGGAACAG	NA	False	NA	NA	False	NA	NA	NA	113600446	113590996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.27	chr11	-	3676	3	ISM	ENSMUSG00000018727.20	ENSMUST00000151396.2	997	4	392	-2539	-165	-2001	3prime_fragment	FALSE	canonical	3	188	junction_1	14.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATATTCTGGGAAC	NA	False	NA	NA	False	NA	NA	NA	113599958	113590998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_113594193_113597242_113597396_113599629
ES.6728.28	chr11	-	6299	4	NIC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	-1	-2030	intron_retention	FALSE	canonical	3	41	junction_3	73.5164380711325	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113600844	113591027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113592922_113593238_113597396_113599629_113599681_113600647
ES.6728.3	chr11	-	1429	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-212	1	combination_of_known_junctions	FALSE	canonical	3	87	junction_7	41.9649999939211	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600564	113588996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.4	chr11	-	3626	6	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-19	1	intron_retention	FALSE	canonical	3	87	junction_5	46.3188946327522	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600371	113588996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.5	chr11	-	1164	8	NNC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	70.5465543207506	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATTGATTCCTTTTCT	NA	False	NA	-8	True	AATATA	-17	NA	113600844	113588996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589383_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
ES.6728.6	chr11	-	1318	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	66.4646940529749	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600494	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ES.6728.7	chr11	-	1235	8	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	71.497109974417	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600875	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600647
ES.6728.8	chr11	-	1855	7	NNC	ENSMUSG00000018727.20	novel	1123	7	NA	NA	-127	0	intron_retention	FALSE	canonical	2	2	junction_6	85.7878520278691	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600479	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113594193_113597242_113597396_113599629_113599681_113600395
ES.6728.9	chr11	-	662	4	NNC	ENSMUSG00000018727.20	novel	1213	8	NA	NA	6483	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.0539474659034	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113593310	113588997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113589401_113590661_113590809_113592881_113592922_113593238
ES.6729.1	chr11	+	176	2	Antisense	novelGene_ENSMUSG00000041598.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	113635766	113644535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_113635836_113644428
ES.6729.2	chr11	+	208	1	Intergenic	novelGene_5457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCCTCTCTCGCTCTTC	NA	False	NA	NA	False	NA	NA	NA	113644356	113644564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113644400_113644600
ES.673.1	chr1	-	7593	2	Antisense	novelGene_ENSMUSG00000026005.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66752131	66744336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_66744991_66745192
ES.673.2	chr1	-	2886	1	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	66752123	66749237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_66749200_66752100
ES.6730.1	chr11	-	2974	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	39	-5	39	3	multi-exon	FALSE	canonical	3	115	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGACTCTTCTTCCT	7402	False	NA	3	True	ATTAAA	-20	NA	113642668	113617672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113620492_113642513
ES.6730.10	chr11	-	2975	2	NNC	ENSMUSG00000041598.8	novel	3405	2	NA	NA	-468	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	6895	False	NA	-6	True	ATTAAA	-11	NA	113643175	113617681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113643010
ES.6730.11	chr11	-	2808	3	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	68	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	7431	False	NA	-6	True	ATTAAA	-11	NA	113642639	113617681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113619530_113619657_113620492_113642513
ES.6730.2	chr11	-	3884	2	FSM	ENSMUSG00000041598.8	ENSMUST00000106616.2	3405	2	-480	1	83	-1	multi-exon	FALSE	canonical	3	5	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTGTCTGACTCTTCT	7446	False	NA	-1	True	ATTAAA	-16	NA	113642624	113617676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113620492_113641555
ES.6730.3	chr11	-	3053	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7398	False	NA	-2	True	ATTAAA	-15	NA	113642672	113617677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113642433
ES.6730.4	chr11	-	2990	2	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	65	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAGTGTCTGACTCTT	7428	False	NA	-3	True	ATTAAA	-14	NA	113642642	113617678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113642465
ES.6730.5	chr11	-	2881	2	NNC	ENSMUSG00000041598.8	novel	3405	2	NA	NA	-2619	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAGTGTCTGACTCTT	4744	False	NA	-3	True	ATTAAA	-14	NA	113645326	113617678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113645258
ES.6730.6	chr11	-	3244	2	NNC	ENSMUSG00000041598.8	novel	3405	2	NA	NA	1624	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAGTGTCTGACTCTT	NA	False	NA	-3	True	ATTAAA	-14	NA	113628524	113617678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113628093
ES.6730.8	chr11	-	3166	3	NNC	ENSMUSG00000041598.8	novel	3008	2	NA	NA	75	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	7438	False	NA	-6	True	ATTAAA	-11	NA	113642632	113617681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113620492_113630104_113630342_113642513
ES.6730.9	chr11	-	3091	2	FSM	ENSMUSG00000041598.8	ENSMUST00000153453.2	562	2	-80	-2449	-80	-4	multi-exon	FALSE	canonical	1	2	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	8010	False	NA	-6	True	ATTAAA	-11	NA	113642060	113617681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_113620492_113641779
ES.6731.1	chr11	+	1855	3	Genic_Genomic	ENSMUSG00000083090.2	novel	505	1	NA	NA	-1548	846	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATGTAAATTTTGG	NA	False	NA	NA	False	NA	NA	NA	113645979	113648878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_113646133_113647130_113648607_113648652
ES.6732.1	chr11	-	136	1	Intergenic	novelGene_5458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAATCAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	113656620	113656484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113656500_113656600
ES.6733.1	chr11	+	4665	1	Intergenic	novelGene_5459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTAGACACAGAACTGT	8744	False	NA	NA	False	NA	NA	NA	113658324	113662989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113658300_113663000
ES.6734.1	chr11	+	132	1	Intergenic	novelGene_5460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113663426	113663558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113663400_113663600
ES.6735.1	chr11	+	179	1	Intergenic	novelGene_5462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTGTCTGATCCA	NA	False	NA	NA	False	NA	NA	NA	113742026	113742205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113742000_113742200
ES.6736.1	chr11	-	7246	19	NIC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	-6990	-11	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	2.33861835331658	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCTGAAGCGGCAGTC	NA	False	NA	NA	False	AATAAA	-11	NA	113724035	113667210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948
ES.6736.2	chr11	-	4265	20	ISM	ENSMUSG00000041592.17	ENSMUST00000041627.14	11287	45	232883	3175	-7116	-3175	3prime_fragment	FALSE	canonical	1	1	junction_8	2.27597350636207	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAAGGTTGTGGGTCCCG	NA	False	NA	NA	False	TATAAA	-11	NA	113724161	113670374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113714196_113714254_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948
ES.6736.3	chr11	-	3588	19	NIC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	-7117	-3796	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	2.33861835331658	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTAGCAACTTCCTTG	NA	False	NA	NA	False	AAAAAG	-24	NA	113724162	113670995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948
ES.6736.4	chr11	-	6688	42	NNC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	-62115	-3796	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	2.19701815119777	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTAGCAACTTCCTTG	NA	False	NA	NA	False	AAAAAG	-24	NA	113779160	113670995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113714196_113714254_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719388_113720723_113720919_113721605_113721705_113723079_113723270_113723948_113724065_113725643_113725882_113729209_113729361_113729442_113729553_113730128_113730251_113732860_113733053_113733494_113733594_113733749_113733946_113741721_113741838_113742527_113742710_113745095_113745237_113747451_113747600_113748521_113748659_113750639_113750817_113757817_113757921_113758730_113758899_113759675_113759793_113760551_113760747_113763656_113763741_113763856_113764048_113765400_113765513_113776075_113776210_113779134
ES.6736.5	chr11	-	2046	9	NNC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	619	-3829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.8328597873269	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAGAAAAATCAAA	9480	False	NA	NA	False	NA	NA	NA	113700630	113671028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113671970_113682200_113682328_113684125_113684262_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697224_113700513
ES.6736.6	chr11	-	171	1	Intergenic	novelGene_5461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5884	False	NA	NA	False	NA	NA	NA	113704226	113704055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113704100_113704200
ES.6736.7	chr11	-	2419	16	NNC	ENSMUSG00000041592.17	novel	2783	19	NA	NA	-62115	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.40791413879619	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCAACCATCCCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	113779160	113739387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_113739578_113741721_113741838_113742527_113742710_113745095_113745237_113747451_113747600_113748521_113748659_113750639_113750817_113757817_113757921_113758730_113758899_113759675_113759793_113760551_113760747_113763656_113763741_113763856_113764048_113765400_113765513_113776075_113776210_113778936
ES.6736.8	chr11	-	4164	13	ISM	ENSMUSG00000041592.17	ENSMUST00000041627.14	11287	45	191572	72189	-48427	-1	internal_fragment	FALSE	canonical	0	0	junction_2	1.49768339630095	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGTCAACCATCCCA	6042	False	NA	NA	False	ATTAAA	-13	NA	113765472	113739388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_113741838_113742527_113742710_113745095_113745237_113747451_113747600_113748521_113748659_113750639_113750817_113757817_113757921_113758730_113758899_113759675_113759793_113760551_113760747_113763656_113763741_113763856_113764048_113765400
ES.6736.9	chr11	-	176	1	Intergenic	novelGene_5463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAACTTT	3940	False	NA	NA	False	NA	NA	NA	113767574	113767398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_113767400_113767600
ES.6737.1	chr11	+	5492	1	Intergenic	novelGene_5464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGATTCTGGTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	113804577	113810069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_113804600_113810100
ES.6738.1	chr11	+	2298	1	Intergenic	novelGene_5465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	114047867	114050165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114047900_114050200
ES.6739.1	chr11	-	2539	2	Intergenic	novelGene_5466	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	114108512	114103529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114106033_114108476
ES.674.1	chr1	-	3497	7	NNC	ENSMUSG00000026004.16	novel	3470	14	NA	NA	71573	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.05480466765633	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTACAGGGCAGGAAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	66768796	66758443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_66760166_66760963_66761133_66762421_66762535_66763716_66763772_66765032_66765158_66765845_66765965_66767602
ES.674.10	chr1	-	2711	6	Fusion	ENSMUSG00000102374.2_ENSMUSG00000026004.16	novel	2802	4	NA	NA	4	11	multi-exon	FALSE	canonical	0	0	junction_1	6.40624695121879	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTGGTTTATTTTT	6628	False	NA	NA	False	AGTAAA	-22	NA	66856717	66808437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_66809382_66812064_66812187_66812580_66812779_66817125_66817268_66840207_66841328_66856532
ES.674.11	chr1	-	2707	7	Fusion	ENSMUSG00000102374.2_ENSMUSG00000026004.16	novel	2802	4	NA	NA	-22	6	multi-exon	FALSE	canonical	0	0	junction_1	5.77350269189626	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAAATTTTGTGGTTTA	6602	False	NA	NA	False	AGTAAA	-17	NA	66856743	66808442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_66809382_66812064_66812187_66812580_66812674_66817125_66817268_66840207_66841328_66846683_66846764_66856532
ES.674.12	chr1	-	2359	3	ISM	ENSMUSG00000026004.16	ENSMUST00000113987.2	2342	8	48	41469	32	-13	5prime_fragment	FALSE	canonical	0	0	junction_2	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAGAAACCAAAAAAA	6672	False	NA	NA	False	NA	NA	NA	66856673	66816169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_66817268_66840207_66841328_66856532
ES.674.13	chr1	-	5056	2	FSM	ENSMUSG00000026004.16	ENSMUST00000189846.2	1600	2	-31	-3425	-15	3425	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCAGTCTCTTGGTGTT	6609	False	NA	NA	False	AGTAAA	-18	NA	66856736	66836475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66841328_66856532
ES.674.14	chr1	-	5229	1	FSM	ENSMUSG00000103756.2	ENSMUST00000194465.2	1139	1	-1751	-2339	-1751	2339	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTCCAGTCTCTTGGT	7989	False	NA	NA	False	AGTAAA	-15	NA	66841707	66836478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66836500_66841700
ES.674.15	chr1	-	234	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGTTAAGGAATTTCTT	4328	False	NA	NA	False	ATTAAA	-36	NA	66845368	66845134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_66845100_66845400
ES.674.2	chr1	-	4441	14	NNC	ENSMUSG00000026004.16	novel	4459	14	NA	NA	-1	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.92067248975984	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCTTACAGGGCAGG	6623	False	NA	NA	False	AATAAA	-17	NA	66856722	66758448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_66760166_66760963_66761133_66762421_66762535_66763716_66763772_66765032_66765158_66765845_66765965_66774795_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812674_66817125_66817268_66840207_66841328_66856532
ES.674.3	chr1	-	5125	6	ISM	ENSMUSG00000026004.16	ENSMUST00000129190.8	3470	14	71510	110	71510	5	intron_retention	FALSE	canonical	0	0	junction_4	2.0976176963403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTGTGTGATTTGATT	NA	False	NA	NA	False	ATTAAA	-17	NA	66768859	66758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_66760166_66760963_66761133_66762421_66762535_66763716_66763772_66765032_66765158_66765845
ES.674.4	chr1	-	3381	14	NNC	ENSMUSG00000026004.16	novel	3470	14	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.41353485777879	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTGTGTGATTTGATT	6627	False	NA	NA	False	ATTAAA	-17	NA	66856718	66758516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_66760166_66760963_66761133_66762421_66762535_66763716_66763772_66765032_66765158_66765845_66765965_66767602_66767735_66774795_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812674_66817125_66817268_66856532
ES.674.6	chr1	-	3419	14	NIC	ENSMUSG00000026004.16	novel	4459	14	NA	NA	51	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.32551259061832	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTGTATTGTGTGAT	6691	False	NA	NA	False	ATTAAA	-11	NA	66856654	66758522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_66760166_66760963_66761133_66762421_66762535_66763716_66763772_66765032_66765158_66765845_66765968_66767602_66767735_66774795_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812779_66817125_66817268_66856532
ES.674.7	chr1	-	2268	8	NNC	ENSMUSG00000026004.16	novel	2342	8	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.46230122694433	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAATAAATGCAAA	6654	False	NA	NA	False	AATAAA	-5	NA	66856691	66774708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_66774904_66777209_66777373_66801206_66801376_66812064_66812187_66812580_66812779_66817125_66817268_66840207_66841328_66856532
ES.674.8	chr1	-	1105	7	NIC	ENSMUSG00000026004.16	novel	2342	8	NA	NA	4	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	4.42216638714053	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAATAAATGCAAA	6628	False	NA	NA	False	AATAAA	-5	NA	66856717	66774708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812674_66817125_66817268_66856532
ES.674.9	chr1	-	1302	8	NIC	ENSMUSG00000026004.16	novel	2342	8	NA	NA	-8	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	4.80645824036021	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAATAAATGCAAA	6616	False	NA	NA	False	AATAAA	-5	NA	66856729	66774708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_66774904_66777209_66777373_66801206_66801412_66812064_66812187_66812580_66812779_66817125_66817268_66846683_66846764_66856532
ES.6740.1	chr11	-	2719	2	NNC	ENSMUSG00000085844.2	novel	1856	2	NA	NA	18	-10385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACTTGGTCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	114129310	114120449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_114121607_114127748
ES.6741.1	chr11	-	4184	1	Intergenic	novelGene_5467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCGACTTTCATTATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	114383351	114379167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114379200_114383400
ES.6742.1	chr11	+	1528	1	Intergenic	novelGene_5472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	114422302	114423830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114422300_114423800
ES.6743.1	chr11	-	3690	4	Intergenic	novelGene_5468	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_3	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGATGATCTGAGAGA	NA	False	NA	NA	False	NA	NA	NA	114426082	114408210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114408422_114408536_114408594_114416741_114416921_114422839
ES.6743.2	chr11	-	5084	2	Intergenic	novelGene_5469	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	114417863	114412000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114416921_114417699
ES.6743.3	chr11	-	4761	4	Intergenic	novelGene_5470	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	114423504	114412013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114412940_114413360_114413439_114413828_114416921_114422839
ES.6743.4	chr11	-	657	1	Intergenic	novelGene_5471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAACAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	114419701	114419044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114419000_114419700
ES.6744.1	chr11	-	169	1	Intergenic	novelGene_5473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	114478742	114478573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114478600_114478700
ES.6745.1	chr11	+	1227	3	Intergenic	novelGene_5474	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAACAAATCAAATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	114480738	114492985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114480827_114481513_114481613_114491945
ES.6745.2	chr11	+	1526	2	Intergenic	novelGene_5475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAAGCTATATTG	NA	False	NA	NA	False	NA	NA	NA	114483617	114486538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114484086_114485480
ES.6746.1	chr11	-	3513	2	Intergenic	novelGene_5476	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114500590	114496864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114497277_114497489
ES.6747.1	chr11	-	175	1	Intergenic	novelGene_5477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	114520626	114520451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114520500_114520600
ES.6748.1	chr11	+	176	1	Intergenic	novelGene_5478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114542856	114543032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114542900_114543000
ES.6749.1	chr11	+	199	2	Intergenic	novelGene_5479	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	977	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTACATTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	114548981	114726321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114549138_114726278
ES.6749.12	chr11	+	363	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	-18	0	-1	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559433	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.14	chr11	+	451	4	FSM	ENSMUSG00000057322.13	ENSMUST00000106599.8	457	4	6	0	6	0	multi-exon	FALSE	canonical	3	12129	junction_3	3589.14031799012	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559440	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.15	chr11	+	3519	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	-26	-7	-26	7	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAGTCACTTAACTTGG	NA	False	NA	18	True	AATAAA	-21	NA	114566230	114611810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.18	chr11	+	1805	3	FSM	ENSMUSG00000034714.10	ENSMUST00000141111.2	695	3	-47	-1063	38	1063	multi-exon	FALSE	canonical	3	191	junction_1	12.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCTGTGGTGCTTCAG	NA	False	NA	NA	False	NA	NA	NA	114566294	114582492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114566499_114577219_114577393_114581064
ES.6749.19	chr11	+	1966	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	39	1481	39	-1481	multi-exon	FALSE	canonical	3	173	junction_11	15.0937896237857	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCAGCCTGAGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	114566295	114610322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.2	chr11	+	608	7	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	-1516	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	8203.13352052468	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114557833	114563158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114557973_114558638_114558732_114559345_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.20	chr11	+	3375	14	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	56.1168476637451	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCTGAGTCACTTAA	NA	False	NA	13	True	AATAAA	-16	NA	114566297	114611805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592678_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.21	chr11	+	2717	13	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	49	8010	-36	-8010	5prime_fragment	FALSE	canonical	3	173	junction_11	15.3015975926989	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAGTCTCTTGTCCA	NA	False	NA	NA	False	GATAAA	-10	NA	114566305	114603793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585
ES.6749.22	chr11	+	2696	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	52	738	-33	-738	multi-exon	FALSE	canonical	3	173	junction_11	15.0937896237857	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTCTGTGTAGCCCTA	NA	False	NA	NA	False	NA	NA	NA	114566308	114611065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.25	chr11	+	3661	15	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	71.8078857019171	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCTGAGTCACTTAACT	NA	False	NA	15	True	AATAAA	-18	NA	114566316	114611807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114566499_114577219_114577393_114581064_114581177_114582628_114582860_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.27	chr11	+	3653	15	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	-19	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	70.5966192750136	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGATGTGCAGCTGAGT	NA	False	NA	6	True	AATAAA	-9	NA	114566322	114611798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114596368_114596607_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.29	chr11	+	2477	6	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	76.6759414679729	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCAGCTGAGTCAC	NA	False	NA	9	True	AATAAA	-12	NA	114566330	114611801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114566499_114577219_114577308_114600902_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.3	chr11	+	379	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	-8	0	-8	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559341	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.30	chr11	+	2109	12	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	-2	-9468	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	60.5076321939556	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTGAGAAACACTGCCC	NA	False	NA	NA	False	NA	NA	NA	114566339	114602335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601515
ES.6749.31	chr11	+	1743	12	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	84	9712	-1	-9712	5prime_fragment	FALSE	canonical	3	173	junction_11	15.9777738186002	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGCTCCCCCTGGCA	NA	False	NA	NA	False	NA	NA	NA	114566340	114602091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636
ES.6749.32	chr11	+	3281	14	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	10563	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.269743412145	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTGCAGCTGAGTCA	NA	False	NA	8	True	AATAAA	-11	NA	114576904	114611800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114576945_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.34	chr11	+	3438	13	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	11598	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.9667050028625	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATGTGCAGCTGAGTC	NA	False	NA	7	True	AATAAA	-10	NA	114577939	114611799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114578311_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.35	chr11	+	127	1	Intergenic	novelGene_5480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAGAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	114578005	114578132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114578000_114578100
ES.6749.36	chr11	+	4092	12	NNC	ENSMUSG00000034714.10	novel	3486	14	NA	NA	17378	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.5804893462936	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCAGCTGAGTCACTT	NA	False	NA	11	True	AATAAA	-14	NA	114583719	114611803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114584853_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.37	chr11	+	2958	11	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	21157	2	21072	-2	3prime_fragment	FALSE	canonical	3	173	junction_8	15.2315462117278	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCAGCTGAGTCAC	NA	False	NA	9	True	AATAAA	-12	NA	114587413	114611801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.38	chr11	+	2815	9	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	26630	2	26545	-2	3prime_fragment	FALSE	canonical	3	173	junction_6	17.0105665690476	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCAGCTGAGTCAC	NA	False	NA	9	True	AATAAA	-12	NA	114592886	114611801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.39	chr11	+	3226	8	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	31246	2	31161	-2	3prime_fragment	FALSE	canonical	3	173	junction_5	13.863768666299	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCAGCTGAGTCAC	NA	False	NA	9	True	AATAAA	-12	NA	114597502	114611801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ES.6749.4	chr11	+	2962	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	18	-2609	-6	2609	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTGTGCTCCCAGCTT	NA	False	NA	NA	False	NA	NA	NA	114559367	114565766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.40	chr11	+	160	1	Intergenic	novelGene_5483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAACTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	114608901	114609061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114608900_114609100
ES.6749.41	chr11	+	164	1	Intergenic	novelGene_5484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATCATATTGTG	NA	False	NA	NA	False	NA	NA	NA	114617128	114617292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114617100_114617300
ES.6749.42	chr11	+	2912	13	FSM	ENSMUSG00000034706.17	ENSMUST00000069325.14	2874	13	-42	4	-38	-4	multi-exon	FALSE	canonical	1	1	junction_1	2.40947204913349	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTACTTGTCATGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	114618195	114648711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114618602_114623718_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643682_114643830_114645060_114645289_114647947
ES.6749.43	chr11	+	2938	9	NNC	ENSMUSG00000034706.17	novel	1704	11	NA	NA	21	-835	intron_retention	FALSE	canonical	0	0	junction_2	2.20439901106855	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGAGCCTCTCAGTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	114623741	114644060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114623922_114625353_114625797_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611
ES.6749.44	chr11	+	1717	10	NNC	ENSMUSG00000034706.17	novel	2874	13	NA	NA	36	-830	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCTCTCAGTTGAAAGC	NA	False	NA	NA	False	AGTAAA	-22	NA	114623756	114644065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642753_114643682
ES.6749.45	chr11	+	2286	7	ISM	ENSMUSG00000034706.17	ENSMUST00000144872.2	2247	8	63	833	63	-833	intron_retention	FALSE	canonical	0	0	junction_1	2.35702260395516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGCCTCTCAGTTGAA	NA	False	NA	NA	False	AGTAAA	-19	NA	114627929	114644062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114628021_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611
ES.6749.46	chr11	+	2095	1	Intergenic	novelGene_5486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCACTGTGTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	114645318	114647413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_114645300_114647400
ES.6749.47	chr11	+	3617	20	NNC	ENSMUSG00000010021.14	novel	3433	20	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.14102544150941	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGTGTTGGGAGCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	114656195	114681564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114656379_114657981_114658063_114669179_114669291_114670037_114670126_114670410_114670548_114671578_114671705_114671996_114672192_114672629_114672777_114673804_114673928_114675576_114675743_114676260_114676436_114676560_114676759_114677201_114677473_114677557_114677680_114678325_114678460_114678653_114678760_114678899_114678988_114679969_114680368_114680584_114680745_114680956
ES.6749.48	chr11	+	3800	5	NNC	ENSMUSG00000051043.17	novel	645	4	NA	NA	-26218	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.0665191733194	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTCCTGTGTGTTTCT	4887	False	NA	NA	False	ATTAAA	-32	NA	114715759	114763437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114715944_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.49	chr11	+	3725	5	NIC	ENSMUSG00000051043.17	novel	645	4	NA	NA	-22	-11	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.2390308658981	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTCTGTTCCTGTGTG	216	False	NA	NA	False	ATTAAA	-27	NA	114741955	114763432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114742070_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.5	chr11	+	438	4	NIC	ENSMUSG00000057322.13	novel	371	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	6598	junction_1	5566.20810486517	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559373	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114559436_114559606_114559793_114562559_114562683_114563090
ES.6749.50	chr11	+	6037	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-696	1	-6	-1	intron_retention	FALSE	canonical	3	20	junction_1	8.2192186706253	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGTTTCTAAGTG	232	False	NA	NA	False	ATTAAA	-37	NA	114741971	114763442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
ES.6749.51	chr11	+	3754	5	NIC	ENSMUSG00000051043.17	novel	1809	4	NA	NA	-125	-27	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.0665191733194	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGAGGGGTTACTG	501	False	NA	NA	False	ATTAAA	-11	NA	114742240	114763416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114742400_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.52	chr11	+	3719	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	-53	1	-53	-1	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGTTTCTAAGTG	875	False	NA	NA	False	ATTAAA	-37	NA	114742614	114763442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.53	chr11	+	3309	5	NNC	ENSMUSG00000051043.17	novel	3667	5	NA	NA	-11	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.0665191733194	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTTACTGCCTCTGTTC	917	False	NA	NA	False	ATTAAA	-20	NA	114742656	114763425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761497
ES.6749.54	chr11	+	1810	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	10	3522	2	0	5prime_fragment	FALSE	canonical	3	20	junction_1	8.2192186706253	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGCTTTGGGCTTGT	938	False	NA	NA	False	AATAAA	-18	NA	114742677	114759921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321
ES.6749.55	chr11	+	3704	5	NIC	ENSMUSG00000051043.17	novel	3667	5	NA	NA	1	-24	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	13.4164078649987	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGGGGTTACTGCCT	967	False	NA	NA	False	ATTAAA	-14	NA	114742706	114763419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.56	chr11	+	3583	12	Fusion	ENSMUSG00000051043.17_ENSMUSG00000034652.13	novel	4633	7	NA	NA	36	-2715	multi-exon	TRUE	canonical	0	0	junction_5	14.560219778561	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTATTTATTTA	1002	False	NA	NA	False	AATAAA	-17	NA	114742741	114792765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321_114759472_114761146_114761586_114781036_114781261_114784063_114784421_114785495_114785605_114788547_114788646_114790170_114790209_114790578_114790690_114791954
ES.6749.57	chr11	+	1818	4	NIC	ENSMUSG00000051043.17	novel	2200	4	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	15.4344492037203	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTTGCTTTGGGCTTGT	1030	False	NA	NA	False	AATAAA	-18	NA	114742769	114759921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321
ES.6749.58	chr11	+	2006	4	FSM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	192	2	162	-1	multi-exon	FALSE	canonical	2	8	junction_1	13.5973853695808	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTTGCTTTGGGCTTG	1128	False	NA	NA	False	AATAAA	-17	NA	114742867	114759920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321
ES.6749.59	chr11	+	3805	5	NIC	ENSMUSG00000051043.17	novel	2200	4	NA	NA	187	-24	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	11.7898261225516	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGGGGTTACTGCCT	1153	False	NA	NA	False	ATTAAA	-14	NA	114742892	114763419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.6	chr11	+	364	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	1	-1	1	1	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	False	NA	29	True	ATTAAA	-16	NA	114559374	114563158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ES.6749.60	chr11	+	3506	5	NIC	ENSMUSG00000051043.17	novel	2200	4	NA	NA	-186	-257	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	11.7898261225516	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTTTTTTTTTTTTTT	1219	False	NA	NA	False	NA	NA	NA	114742958	114763186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.61	chr11	+	1397	4	ISM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	11940	1910	-710	100	3prime_fragment	FALSE	canonical	3	28	junction_3	4.98887651569859	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTTGGCCATGTTGGT	NA	False	NA	NA	False	NA	NA	NA	114754607	114761533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114755373_114757450_114757546_114759321_114759472_114761146
ES.6749.7	chr11	+	315	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8532.8401338593	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559394	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562672_114563090
ES.6749.8	chr11	+	3493	3	ISM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	53	0	29	0	intron_retention	FALSE	canonical	3	6598	junction_1	6325	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559402	114563157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_114559436_114559606_114559641_114559731
ES.6749.9	chr11	+	308	5	NNC	ENSMUSG00000057322.13	novel	371	5	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7398.28795651399	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCCTCAGTCTCTG	NA	False	NA	30	True	ATTAAA	-17	NA	114559405	114563159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_114559436_114559606_114559632_114559731_114559793_114562559_114562683_114563090
ES.675.1	chr1	-	5025	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-68	-3041	-68	3041	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTTTATTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	66902504	66866956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ES.675.2	chr1	-	1857	11	NNC	ENSMUSG00000026003.6	novel	1916	11	NA	NA	2	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.6832458349868	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGTAAAACTTAA	NA	False	NA	-56	True	NA	NA	NA	66902434	66870034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892431_66893782_66893921_66896557_66896714_66902331
ES.675.3	chr1	-	1944	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-65	37	-65	-37	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAGTAAAACTTAA	NA	False	NA	-56	True	NA	NA	NA	66902501	66870034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ES.675.4	chr1	-	1603	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-22	335	-22	-335	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCTTTTAATGTCTT	NA	False	NA	90	True	TATAAA	-14	NA	66902458	66870332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ES.675.5	chr1	-	1527	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	-51	440	-51	-440	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGGGAGAGAGAAATT	NA	False	NA	-15	True	AATAAA	-18	NA	66902487	66870437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ES.675.6	chr1	-	2786	1	NIC	ENSMUSG00000026003.6	novel	1916	11	NA	NA	24267	-440	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGGGAGAGAGAAATT	NA	False	NA	-15	True	AATAAA	-18	NA	66873223	66870437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_66870400_66873200
ES.6750.1	chr11	-	156	1	Intergenic	novelGene_5481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	114579441	114579285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114579300_114579400
ES.6751.1	chr11	-	177	1	Intergenic	novelGene_5482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114597016	114596839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114596800_114597000
ES.6752.1	chr11	-	3404	1	Antisense	novelGene_ENSMUSG00000034706.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACAGTGTTTCCCTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	114643666	114640262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_114640300_114643700
ES.6752.2	chr11	-	176	1	Intergenic	novelGene_5485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGGTGATGCCCACACC	NA	False	NA	NA	False	NA	NA	NA	114641982	114641806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114641800_114642000
ES.6753.1	chr11	-	176	1	Intergenic	novelGene_5487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	114690850	114690674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114690700_114690800
ES.6754.1	chr11	-	175	1	Intergenic	novelGene_5488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTATGACAGAGGC	NA	False	NA	NA	False	NA	NA	NA	114718354	114718179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114718200_114718400
ES.6755.1	chr11	-	182	1	Intergenic	novelGene_5489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTTACA	NA	False	NA	NA	False	NA	NA	NA	114750532	114750350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114750400_114750500
ES.6756.1	chr11	-	174	1	Antisense	novelGene_ENSMUSG00000034652.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTTGTAA	2499	False	NA	NA	False	NA	NA	NA	114793396	114793222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_114793200_114793400
ES.6757.1	chr11	-	157	1	Intergenic	novelGene_5490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	114801201	114801044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114801000_114801200
ES.6758.1	chr11	-	2783	5	NNC	ENSMUSG00000063193.10	novel	2641	4	NA	NA	-4551	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTATTCTTTAATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	114829763	114813606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_114815888_114816849_114816941_114819119_114819226_114829296_114829449_114829610
ES.6758.2	chr11	-	3654	1	Intergenic	novelGene_5491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCATATCAAGACAATTT	NA	False	NA	NA	False	NA	NA	NA	114829422	114825768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_114825800_114829400
ES.6759.1	chr11	-	2844	5	NNC	ENSMUSG00000034641.3	novel	2645	4	NA	NA	-58690	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAAGCATTTTTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	114939438	114873103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_114875124_114876920_114877048_114878128_114878471_114880596_114880908_114939394
ES.676.1	chr1	-	4130	8	NIC	ENSMUSG00000026000.17	novel	4461	9	NA	NA	156	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	186.344096898666	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCGGGTACTGTTGTTT	NA	False	NA	-3	True	AATAAA	-16	NA	67077837	67039676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67060016_67060225_67073282_67073401_67077653
ES.676.10	chr1	-	1716	10	NNC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_8	200.209581546963	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCGAGTTTTTATTT	NA	False	NA	-7	True	AATGAA	-14	NA	67078030	67042535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67061391_67061508_67073282_67073401_67077653
ES.676.11	chr1	-	2029	12	NNC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-25	-2	intron_retention	FALSE	canonical	0	0	junction_7	219.348547120711	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCGAGTTTTTATTT	NA	False	NA	-7	True	AATGAA	-14	NA	67078056	67042535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67053764_67053903_67054267_67054458_67055004_67055080_67060016_67060225_67073282_67073401_67077653
ES.676.12	chr1	-	1634	10	NNC	ENSMUSG00000026000.17	novel	1385	10	NA	NA	-6	-4	intron_retention	FALSE	canonical	2	4	junction_9	197.843621998365	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGGTCGAGTTTTTAT	NA	False	NA	-9	True	AATGAA	-12	NA	67077999	67042537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67074579_67074647_67077653
ES.676.13	chr1	-	6119	3	ISM	ENSMUSG00000026000.17	ENSMUST00000149996.2	570	5	1	5471	1	4205	intron_retention	FALSE	canonical	3	355	junction_1	2	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAACAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67077992	67054562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_67060225_67073282_67073401_67077653
ES.676.14	chr1	-	1194	1	Genic_Genomic	ENSMUSG00000026000.17	novel	NA	NA	NA	NA	-12	-18082	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67078043	67076849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_67076800_67078000
ES.676.15	chr1	-	914	2	ISM	ENSMUSG00000026000.17	ENSMUST00000149996.2	570	5	-8	27786	-8	-18110	5prime_fragment	FALSE	canonical	3	85	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67078001	67076877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_67077751_67077960
ES.676.3	chr1	-	4245	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	-5	-2855	-5	-3	multi-exon	FALSE	canonical	0	0	junction_9	165.875529714376	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATCGGGTACTGTTGT	NA	False	NA	-5	True	AATAAA	-14	NA	67077998	67039678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
ES.676.4	chr1	-	4228	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	12	-4	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCGGGTACTGTTG	NA	False	NA	-6	True	AATAAA	-13	NA	67078012	67039679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
ES.676.5	chr1	-	1628	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	-25	2858	-25	0	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078056	67042533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ES.676.7	chr1	-	1434	10	FSM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	-24	2860	-17	-2	multi-exon	FALSE	canonical	3	56	junction_9	152.892845556037	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCGAGTTTTTATTT	NA	False	NA	-7	True	AATGAA	-14	NA	67078048	67042535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077934
ES.676.8	chr1	-	1407	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCGAGTTTTTATTT	NA	False	NA	-7	True	AATGAA	-14	NA	67078047	67042535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
ES.676.9	chr1	-	1385	10	NNC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	165.875529714376	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTCGAGTTTTTATTT	NA	False	NA	-7	True	AATGAA	-14	NA	67078012	67042535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077947
ES.6760.1	chr11	-	1922	1	Intergenic	novelGene_5492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	5374	False	NA	NA	False	NA	NA	NA	115043011	115041089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115041100_115043000
ES.6761.1	chr11	+	1969	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	-44	0	-44	0	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTGTGTCCTCCTTT	NA	False	NA	10	True	NA	NA	NA	115054122	115072007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ES.6761.2	chr11	+	1788	5	NIC	ENSMUSG00000020733.4	novel	1925	6	NA	NA	-26	-9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	61.7130456224614	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGCTCAAGCCTCTGTG	NA	False	NA	1	True	NA	NA	NA	115054140	115071998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115054778_115067176_115067339_115069875_115069917_115070832_115070923_115071140
ES.6761.3	chr11	+	3072	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	42	-1189	42	1189	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGGCCTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	115054208	115073196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ES.6762.1	chr11	-	186	1	Intergenic	novelGene_5493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	5858	False	NA	NA	False	NA	NA	NA	115060843	115060657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115060700_115060800
ES.6763.2	chr11	-	1167	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	36	1	1	-1	multi-exon	FALSE	canonical	2	2	junction_5	40.7553677446297	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTTTGTTCAC	NA	False	NA	-6	True	AGTAAA	-15	NA	115078180	115073658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
ES.6763.5	chr11	-	2786	3	NIC	ENSMUSG00000015542.18	novel	1204	7	NA	NA	-7	-1	intron_retention	FALSE	canonical	2	2	junction_2	49.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTTTGTTCAC	NA	False	NA	-6	True	AGTAAA	-15	NA	115078165	115073658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115074092_115074180_115075943_115077574
ES.6763.6	chr11	-	1622	5	NIC	ENSMUSG00000015542.18	novel	1204	7	NA	NA	2	-1	intron_retention	FALSE	canonical	2	2	junction_4	47.4578760586691	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTTTGTTCAC	NA	False	NA	-6	True	AGTAAA	-15	NA	115078179	115073658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115074092_115074180_115074511_115075308_115075453_115075832_115075943_115077574
ES.6764.10	chr11	+	3748	4	NNC	ENSMUSG00000045980.14	novel	4561	10	NA	NA	39696	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.6999743983464	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGGTTGTCTCCTCTGTC	NA	False	NA	NA	False	AATAAA	-12	NA	115118072	115137847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115118198_115119246_115119341_115134195_115135641_115135763
ES.6764.11	chr11	+	2408	4	NNC	ENSMUSG00000045980.14	novel	4561	10	NA	NA	40268	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.483844059096	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCTTCTCCCTCTTGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	115118644	115136588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115118688_115119246_115119341_115134195_115135637_115135758
ES.6764.12	chr11	+	3753	4	NNC	ENSMUSG00000045980.14	novel	4561	10	NA	NA	40356	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.1560124771785	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTCTCCTCTGTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	115118732	115137850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115118859_115119246_115119341_115134195_115135637_115135758
ES.6764.2	chr11	+	3163	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	14.0032139168121	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCTCCCTCTTGCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	115078326	115136590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195_115135627_115135754
ES.6764.3	chr11	+	4693	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	17.4942847810363	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTTGTCTCCTCTGTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	115078328	115137849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115097274_115097420_115119246_115119341_115134195
ES.6764.4	chr11	+	3343	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	16	1205	-8	54	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACCTCACCCCACCCC	NA	False	NA	NA	False	ATTAAA	-17	NA	115078328	115136644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
ES.6764.5	chr11	+	3165	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.0032139168121	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCTCTTGCTTAAGGAC	NA	False	NA	NA	False	ATTAAA	-18	NA	115078335	115136595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195_115135637_115135758
ES.6764.6	chr11	+	1536	3	FSM	ENSMUSG00000045980.14	ENSMUST00000135536.8	369	3	0	-1167	0	1167	multi-exon	FALSE	canonical	3	30	junction_1	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115078336	115089396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115078425_115079035_115079149_115088061
ES.6764.7	chr11	+	4419	11	NNC	ENSMUSG00000045980.14	novel	4564	10	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	14.0032139168121	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTCTCCTCTGTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	115078336	115137850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195_115135637_115135758
ES.6764.8	chr11	+	4537	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	28	-1	4	1	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTCTCCTCTGTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	115078340	115137850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
ES.6764.9	chr11	+	6266	1	Intergenic	novelGene_5494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTGGTGTATGTAGCT	NA	False	NA	NA	False	AATAAA	-19	NA	115104757	115111023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115104800_115111000
ES.6765.1	chr11	-	1983	1	Antisense	novelGene_ENSMUSG00000045980.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACAGTGCTCAATTCTAC	NA	False	NA	NA	False	AATAAA	-18	NA	115134763	115132780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_115132800_115134800
ES.6766.1	chr11	-	4362	13	NIC	ENSMUSG00000020734.14	novel	4895	15	NA	NA	29	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	1.68942791105944	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	5092	False	NA	NA	False	ATTAAA	-19	NA	115158040	115139994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115145005_115146098_115146253_115146511_115146678_115146868_115147081_115148162_115148278_115148598_115149198_115151559_115151974_115157815
ES.6766.2	chr11	-	4898	7	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	7098	-1	intron_retention	FALSE	canonical	1	2	junction_3	1.06718737290547	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTCCTAGCTGCCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	115149157	115139995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115141534_115141834_115142068_115143408_115144754_115144878_115145005_115146098_115147081_115148162_115148278_115148598
ES.6766.3	chr11	-	2622	7	NNC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	10001	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.77169096878911	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTCCTAGCTGCCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	115146254	115139995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115144995_115146098
ES.6766.4	chr11	-	1696	1	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	14562	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTGGTCCTAGCTGCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	115141693	115139997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115140000_115141700
ES.6766.5	chr11	-	4286	13	NNC	ENSMUSG00000020734.14	novel	4895	15	NA	NA	-26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1.68942791105944	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTGGTCCTAGCTGCCT	5037	False	NA	NA	False	ATTAAA	-16	NA	115158095	115139997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115145005_115146098_115146253_115146511_115146678_115146868_115147081_115148162_115148278_115148598_115149198_115151559_115151846_115157815
ES.6766.6	chr11	-	4533	14	NIC	ENSMUSG00000020734.14	novel	4895	15	NA	NA	25	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	1.78089798504465	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTTGGTCCTAGCTGC	5088	False	NA	NA	False	ATTAAA	-14	NA	115158044	115139999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115145005_115146098_115146253_115146511_115146678_115146868_115147081_115148162_115148278_115148598_115149198_115151559_115151974_115157245_115157418_115157815
ES.6766.7	chr11	-	2963	4	ISM	ENSMUSG00000020734.14	ENSMUST00000003351.13	4279	13	11213	6	11213	-6	intron_retention	FALSE	canonical	2	3	junction_1	0.942809041582063	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCATTTGGTCCTAGCTG	NA	False	NA	NA	False	ATTAAA	-13	NA	115145042	115140000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033
ES.6767.1	chr11	-	2011	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	-64	1	-64	-1	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGGCTGATAGCTACC	NA	False	NA	-1	True	AATAAA	-16	NA	115167940	115158850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ES.6767.10	chr11	-	1789	11	NIC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-66	-4	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	33.8007396368778	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCATGGCTGATAGCT	NA	False	NA	-4	True	AATAAA	-13	NA	115167806	115158853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ES.6767.11	chr11	-	1760	12	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-192	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	51.6725225509347	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCCATGGCTGATAGC	NA	False	NA	-5	True	AATAAA	-12	NA	115168068	115158854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115161685_115161757_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995
ES.6767.12	chr11	-	1449	9	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-52	-809	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.555155297314	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAGAAAGTCTCAGCTC	NA	False	NA	NA	False	AGTAAA	-25	NA	115167792	115159982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115160443_115160522_115160707_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ES.6767.13	chr11	-	4983	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-34	2	-34	-2	multi-exon	FALSE	canonical	2	4	junction_5	1.6	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTATTGTCCCAATA	395	False	NA	NA	False	TTTAAA	-5	NA	115188374	115170449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ES.6767.14	chr11	-	2116	1	ISM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	14752	1025	14752	-1025	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	115173588	115171472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115171500_115173600
ES.6767.15	chr11	-	1457	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	-209	3703	-60	-3703	multi-exon	FALSE	canonical	2	4	junction_5	1.6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCAGCATCCCTCCTTCT	220	False	NA	NA	False	NA	NA	NA	115188549	115174150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ES.6767.16	chr11	-	1192	6	NIC	ENSMUSG00000044788.11	novel	4951	6	NA	NA	-17	-3745	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	1.95959179422654	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGTGCATCCTGATC	263	False	NA	NA	False	AAGAAA	-13	NA	115188506	115174192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188319
ES.6767.3	chr11	-	5208	12	Fusion	ENSMUSG00000018861.9_ENSMUSG00000044788.11	novel	1948	12	NA	NA	-4624	-2	multi-exon	FALSE	non_canonical	0	0	junction_11	48.0196240876651	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGGCTGATAGCTAC	NA	False	NA	-2	True	AATAAA	-15	NA	115172500	115158851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995_115168259_115169174
ES.6767.4	chr11	-	3997	13	Fusion	ENSMUSG00000018861.9_ENSMUSG00000044788.11	novel	1948	12	NA	NA	-3325	-2	multi-exon	FALSE	canonical	1	1	junction_12	41.2292877293153	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGGCTGATAGCTAC	NA	False	NA	-2	True	AATAAA	-15	NA	115171201	115158851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995_115168259_115169171
ES.6767.5	chr11	-	2940	18	Fusion	ENSMUSG00000018861.9_ENSMUSG00000044788.11	novel	1948	12	NA	NA	912	-2	multi-exon	FALSE	canonical	0	0	junction_13	52.0726136604031	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGGCTGATAGCTAC	1341	False	NA	-2	True	AATAAA	-15	NA	115187428	115158851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995_115168259_115169171_115169423_115174373_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363
ES.6767.6	chr11	-	3525	9	NIC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-35	-2	intron_retention	FALSE	canonical	3	83	junction_5	16.0929914869797	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCATGGCTGATAGCTAC	NA	False	NA	-2	True	AATAAA	-15	NA	115167775	115158851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904
ES.6767.7	chr11	-	3225	18	Fusion	ENSMUSG00000018861.9_ENSMUSG00000044788.11	novel	1948	12	NA	NA	-49	-4	multi-exon	FALSE	canonical	0	0	junction_12	51.5727725166284	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCATGGCTGATAGCT	380	False	NA	-4	True	AATAAA	-13	NA	115188389	115158853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161250_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995_115168259_115169171_115169423_115174346_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ES.6768.1	chr11	-	169	1	Intergenic	novelGene_5495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	115234202	115234033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115234000_115234200
ES.6769.1	chr11	-	3280	19	FSM	ENSMUSG00000034586.15	ENSMUST00000106542.9	3276	19	-3	-1	-3	1	multi-exon	FALSE	canonical	1	2	junction_16	3.88928569404159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGTCTCTGTACATG	8657	False	NA	1	True	AATAAA	-16	NA	115258585	115238531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250638_115251147_115251319_115252464_115252615_115258369
ES.6769.3	chr11	-	3708	2	ISM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	16033	5	-683	-5	intron_retention	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTGTTGTGTCTCTG	NA	False	NA	-5	True	AATAAA	-10	NA	115242512	115238537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115239359_115239625
ES.677.1	chr1	-	148	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCATAAACTTT	NA	False	NA	NA	False	NA	NA	NA	67709685	67709537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_67709500_67709700
ES.6770.1	chr11	+	3768	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-59	-9	-59	9	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGGTCTATCGTTTCG	NA	False	NA	21	True	AATAAA	-31	NA	115272682	115286967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.10	chr11	+	3536	4	NIC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	17	2	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	80.3838015744189	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGACCCTGGGTCTAT	NA	False	NA	14	True	AATAAA	-24	NA	115272758	115286960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115273228_115281336_115281450_115283484_115283650_115284171
ES.6770.11	chr11	+	187	1	Intergenic	novelGene_5496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTCATTGTGGGAGCT	480	False	NA	4	True	NA	NA	NA	115277905	115278092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115277900_115278100
ES.6770.12	chr11	+	3414	4	ISM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	8396	-1	8396	1	3prime_fragment	FALSE	canonical	3	168	junction_2	8.64098759787715	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGACCCTGGGTCTA	3712	False	NA	13	True	AATAAA	-23	NA	115281137	115286959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.13	chr11	+	3279	3	ISM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	8772	-3	8772	3	3prime_fragment	FALSE	canonical	3	168	junction_1	2	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGACCCTGGGTCTATC	4088	False	NA	15	True	AATAAA	-25	NA	115281513	115286961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115281838_115283484_115283650_115284171
ES.6770.14	chr11	+	2537	1	Genic_Genomic	ENSMUSG00000050910.6	novel	NA	NA	NA	NA	14212	2532	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCGAGTACTTTTCCTT	9528	False	NA	NA	False	NA	NA	NA	115286953	115289490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_115287000_115289500
ES.6770.15	chr11	+	874	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	-21	1743	-21	12	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGCTTTGCACAGGGCT	NA	False	NA	28	True	AATAAA	-28	NA	115294556	115301757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.16	chr11	+	757	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	-9	1	-4	-1	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTTCCAGTGAGAGC	NA	False	NA	15	True	AATAAA	-15	NA	115294573	115301744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.17	chr11	+	933	5	NIC	ENSMUSG00000018858.16	novel	2596	6	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	944	junction_3	65.7053080047571	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTTCCAGTGAGAGC	NA	False	NA	15	True	AATAAA	-15	NA	115294573	115301744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115301228_115301463
ES.6770.18	chr11	+	717	5	NIC	ENSMUSG00000018858.16	novel	749	6	NA	NA	-4	-4	combination_of_known_splicesites	TRUE	canonical	2	4	junction_1	446.00917871721	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTGTTTCCAGTGAG	NA	False	NA	12	True	AATAAA	-12	NA	115294573	115301741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115294700_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.19	chr11	+	739	4	NIC	ENSMUSG00000018858.16	novel	2522	5	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	498.218827424255	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTGTTTCCAGTGAG	NA	False	NA	12	True	AATAAA	-12	NA	115294578	115301741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115294787_115300885_115300969_115301057_115301228_115301463
ES.6770.2	chr11	+	3093	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-58	665	-58	-665	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCCCTCATGTTGCGTT	NA	False	NA	NA	False	NA	NA	NA	115272683	115286293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.20	chr11	+	6839	3	FSM	ENSMUSG00000018858.16	ENSMUST00000155134.2	534	3	-6108	-197	1	-3	multi-exon	FALSE	canonical	3	1001	junction_1	61.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCTGTTTCCAGTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	115294578	115301742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115300969_115301057_115301228_115301463
ES.6770.21	chr11	+	1547	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	6	1043	1	712	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTCGCTGTCCACA	NA	False	NA	NA	False	AATGAA	-9	NA	115294583	115302457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.22	chr11	+	773	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	4	1745	1	-2	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGTTTCCAGTGAGAG	NA	False	NA	14	True	AATAAA	-14	NA	115294583	115301743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
ES.6770.23	chr11	+	2496	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	2	-1749	2	6	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCCTTTCTTGTTTCACT	NA	False	NA	NA	False	NA	NA	NA	115294584	115303494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.24	chr11	+	866	6	NNC	ENSMUSG00000018858.16	novel	2596	6	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	418.249973102211	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCCTGTTTCCAGTGAGA	NA	False	NA	13	True	AATAAA	-13	NA	115294597	115301742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115294835_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ES.6770.25	chr11	+	3164	2	NNC	ENSMUSG00000018858.16	novel	513	2	NA	NA	2029	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTTCCAGTGAGAGC	NA	False	NA	15	True	AATAAA	-15	NA	115296676	115301744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115297573_115299476
ES.6770.26	chr11	+	2959	2	FSM	ENSMUSG00000018858.16	ENSMUST00000134386.2	513	2	-2436	-10	-2137	-1	multi-exon	FALSE	canonical	3	1124	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTTTCCAGTGAGAGC	NA	False	NA	15	True	AATAAA	-15	NA	115298549	115301744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115301228_115301463
ES.6770.27	chr11	+	1995	7	NNC	ENSMUSG00000016940.19	novel	1764	6	NA	NA	-91	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	59.2452529743945	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3645	False	NA	27	True	NA	NA	NA	115310862	115322099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115320711_115320853_115321138
ES.6770.28	chr11	+	1828	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	-63	-1	-63	1	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCTCCTTCATT	3673	False	NA	29	True	NA	NA	NA	115310890	115322101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
ES.6770.29	chr11	+	2733	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	-85	1	-63	-1	multi-exon	FALSE	canonical	3	121	junction_1	5.97390157267426	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3673	False	NA	27	True	NA	NA	NA	115310890	115322099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
ES.6770.30	chr11	+	4484	4	ISM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	-61	-1	-61	1	intron_retention	FALSE	canonical	3	121	junction_1	3.09120616516523	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCTCCTTCATT	3675	False	NA	29	True	NA	NA	NA	115310892	115322101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258
ES.6770.31	chr11	+	4174	4	NIC	ENSMUSG00000016940.19	novel	2649	5	NA	NA	-27	0	intron_retention	FALSE	canonical	3	122	junction_2	5.73488351136175	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3709	False	NA	28	True	NA	NA	NA	115310926	115322100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115312918_115315309_115315402_115318258_115318355_115320105
ES.6770.32	chr11	+	2549	6	NIC	ENSMUSG00000016940.19	novel	904	6	NA	NA	-6	-3	intron_retention	FALSE	canonical	1	1	junction_5	50.5830010972066	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACCTGTGTCTCTCCTT	3752	False	NA	25	True	NA	NA	NA	115310969	115322097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320609_115320711
ES.6770.33	chr11	+	5881	3	NIC	ENSMUSG00000016940.19	novel	2649	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	122	junction_2	3	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3753	False	NA	28	True	NA	NA	NA	115310970	115322100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115312918_115315309_115315402_115318258
ES.6770.35	chr11	+	5508	4	NIC	ENSMUSG00000016940.19	novel	2649	5	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	121	junction_1	6.12825877028341	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3755	False	NA	27	True	NA	NA	NA	115310972	115322099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115311333_115312808_115312918_115315309_115318355_115320105
ES.6770.36	chr11	+	4597	5	NIC	ENSMUSG00000016940.19	novel	1764	6	NA	NA	1	-1	intron_retention	FALSE	canonical	3	121	junction_1	5.97390157267426	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3759	False	NA	27	True	NA	NA	NA	115310976	115322099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115311333_115312808_115312918_115315309_115318355_115320105_115320232_115321138
ES.6770.37	chr11	+	836	2	FSM	ENSMUSG00000016940.19	ENSMUST00000143856.2	642	2	-160	-34	2	34	multi-exon	FALSE	canonical	3	121	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTCTGGTCTCATGCTT	3760	False	NA	NA	False	AATAAA	-19	NA	115310977	115313289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115311333_115312808
ES.6770.38	chr11	+	3527	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	25	-1788	3	1788	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTTGGACCGTGTG	3761	False	NA	NA	False	AATAAA	-14	NA	115310978	115323888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
ES.6770.39	chr11	+	3482	5	NIC	ENSMUSG00000016940.19	novel	1764	6	NA	NA	8	-3	intron_retention	FALSE	canonical	3	121	junction_1	2.77263412660235	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACCTGTGTCTCTCCTT	3766	False	NA	25	True	NA	NA	NA	115310983	115322097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115320232_115321138
ES.6770.4	chr11	+	3827	6	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.3127511115608	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAAGTGACCCTGGGT	NA	False	NA	10	True	AATAAA	-20	NA	115272709	115286956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115273228_115281005_115281103_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.40	chr11	+	3389	4	NIC	ENSMUSG00000016940.19	novel	1764	6	NA	NA	11	-1	intron_retention	FALSE	canonical	0	0	junction_2	57.2771042098557	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGTCTCTCCTTCA	3769	False	NA	27	True	NA	NA	NA	115310986	115322099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115311333_115312808_115312918_115318258_115320232_115321138
ES.6770.41	chr11	+	2752	1	Genic_Genomic	ENSMUSG00000016940.19	novel	NA	NA	NA	NA	958	1788	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTTGGACCGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	115321136	115323888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_115321100_115323900
ES.6770.42	chr11	+	203	1	Intergenic	novelGene_5498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTCACACAAGCTTTCC	6425	False	NA	NA	False	NA	NA	NA	115329984	115330187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115330000_115330200
ES.6770.5	chr11	+	3707	5	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5767588763066	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGACCCTGGGTCTA	NA	False	NA	13	True	AATAAA	-23	NA	115272709	115286959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115273202_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.6	chr11	+	5015	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	-5	-1310	-5	1310	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAGGCCTGCTGTAAG	NA	False	NA	NA	False	AATAAA	-32	NA	115272736	115288268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.7	chr11	+	3009	5	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	-1	-666	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.5767588763066	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCCCTCATGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	115272740	115286292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115273202_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ES.6770.8	chr11	+	3668	5	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.4544220816346	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAAGTGACCCTGGGT	NA	False	NA	10	True	AATAAA	-20	NA	115272743	115286956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115273228_115281336_115281450_115281688_115281810_115283484_115283650_115284171
ES.6770.9	chr11	+	3758	6	NNC	ENSMUSG00000050910.6	novel	3700	5	NA	NA	13	56835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	70.618977619334	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAAGAGAGAACATT	NA	False	NA	NA	False	TTTAAA	-5	NA	115272754	115343793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171_115286959_115343722
ES.6771.1	chr11	-	169	1	Intergenic	novelGene_5497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	115305431	115305262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115305300_115305400
ES.6772.11	chr11	-	2361	2	ISM	ENSMUSG00000034566.11	ENSMUST00000137563.8	510	4	-166	4	-166	-4	intron_retention	FALSE	canonical	3	2984	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCGTCTCTGAGTAGAT	NA	False	NA	-7	True	AATAAA	-18	NA	115309014	115306518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115306706_115306840
ES.6772.12	chr11	-	1746	6	FSM	ENSMUSG00000034566.11	ENSMUST00000137754.2	468	6	-1156	-122	20	-7	multi-exon	FALSE	canonical	0	0	junction_5	1306.80765225797	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCGTCTCTGAGTA	NA	False	NA	-10	True	AATAAA	-15	NA	115310723	115306521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115309524
ES.6772.13	chr11	-	2377	4	FSM	ENSMUSG00000034566.11	ENSMUST00000137563.8	510	4	-1874	7	21	-7	multi-exon	FALSE	canonical	3	2984	junction_1	272.998575494859	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCGTCTCTGAGTA	NA	False	NA	-10	True	AATAAA	-15	NA	115310722	115306521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664
ES.6772.14	chr11	-	689	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	20	-7	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	1295.81085039445	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCGTCTCTGAGTA	NA	False	NA	-10	True	AATAAA	-15	NA	115310723	115306521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310581
ES.6772.16	chr11	-	695	7	FSM	ENSMUSG00000034566.11	ENSMUST00000106537.8	682	7	-20	7	-20	-7	multi-exon	FALSE	canonical	3	5	junction_6	1501.20529353361	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCGTCTCTGAGTA	NA	False	NA	-10	True	AATAAA	-15	NA	115310763	115306521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310017_115310120_115310717
ES.6772.17	chr11	-	620	6	FSM	ENSMUSG00000034566.11	ENSMUST00000073791.10	659	6	32	7	-13	-7	multi-exon	FALSE	canonical	3	13	junction_5	1301.70156333931	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATCGTCTCTGAGTA	NA	False	NA	-10	True	AATAAA	-15	NA	115310756	115306521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309377_115310717
ES.6772.18	chr11	-	1979	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	-1442	-51	13	-8	multi-exon	FALSE	canonical	3	2962	junction_4	275.878936310839	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTATCGTCTCTGAGT	NA	False	NA	-11	True	AATAAA	-14	NA	115310775	115306522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
ES.6772.2	chr11	-	2673	2	NIC	ENSMUSG00000034566.11	novel	510	4	NA	NA	-229	885	intron_retention	FALSE	canonical	3	3240	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAACAAAACAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	115309077	115305629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115306904_115307678
ES.6772.3	chr11	-	4224	3	FSM	ENSMUSG00000034566.11	ENSMUST00000141474.8	420	3	-2919	-885	-20	885	multi-exon	FALSE	canonical	3	2984	junction_1	128	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAACAAAACAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	115310763	115305629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678
ES.6772.4	chr11	-	5069	1	Genic_Genomic	ENSMUSG00000034566.11	novel	NA	NA	NA	NA	3	843	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAACCAAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	115310740	115305671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_115305700_115310700
ES.6772.6	chr11	-	471	5	NIC	ENSMUSG00000034566.11	novel	625	6	NA	NA	21	-2	combination_of_known_splicesites	FALSE	canonical	3	161	junction_4	1375.51172295986	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310767	115306516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115310717
ES.6772.7	chr11	-	3326	3	FSM	ENSMUSG00000034566.11	ENSMUST00000141474.8	420	3	-2908	2	-9	-2	multi-exon	FALSE	canonical	3	2984	junction_1	128	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310752	115306516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115306706_115306840_115306904_115307678
ES.6772.8	chr11	-	742	7	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-558	-2	at_least_one_novel_splicesite	FALSE	non_canonical	2	8	junction_6	1210.5057368261	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115311346	115306516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717_115310801_115311239
ES.6772.9	chr11	-	589	6	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1274.03981099493	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCGTCTCTGAGTAGATAA	NA	False	NA	-5	True	AATAAA	-20	NA	115310756	115306516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115306706_115306840_115306898_115307674_115307751_115308664_115308762_115309211_115309343_115310717
ES.6773.1	chr11	+	2987	4	FSM	ENSMUSG00000045775.16	ENSMUST00000092445.12	1538	4	-15	-1434	-11	-43	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTTTTGGCCTG	NA	False	NA	NA	False	NA	NA	NA	115353288	115365181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115353634_115355739_115355884_115360161_115360975_115363496
ES.6773.2	chr11	+	2855	4	NIC	ENSMUSG00000045775.16	novel	2340	3	NA	NA	119	-23	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.816496580927726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGATGCCATCTTCCAA	NA	False	NA	NA	False	ATTAAA	-18	NA	115354768	115365201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115354859_115355739_115355884_115360058_115360975_115363496
ES.6773.3	chr11	+	4115	2	NNC	ENSMUSG00000045775.16	novel	2340	3	NA	NA	4845	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGATGCCATCTTCCAA	NA	False	NA	NA	False	ATTAAA	-18	NA	115360240	115365201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115361529_115362374
ES.6774.1	chr11	-	170	1	Intergenic	novelGene_5499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	5287	False	NA	NA	False	NA	NA	NA	115362423	115362253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115362300_115362400
ES.6775.1	chr11	+	2260	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	1	-1	1	1	multi-exon	FALSE	canonical	3	16	junction_2	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTGCTAGTCTCCT	NA	False	NA	NA	False	ATTAAA	-23	NA	115366493	115381294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115366854_115366947_115367092_115379538
ES.6775.2	chr11	+	3234	3	FSM	ENSMUSG00000057219.12	ENSMUST00000136985.8	1009	3	-30	-2195	1	686	multi-exon	FALSE	canonical	1	1	junction_2	10	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTATATATTCTCATC	NA	False	NA	NA	False	NA	NA	NA	115366493	115376798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115366854_115366947_115367092_115374068
ES.6775.3	chr11	+	3376	2	Genic_Genomic	ENSMUSG00000057219.12	novel	1009	3	NA	NA	4508	397	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGTTGTTTTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	115371287	115375000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_115371431_115371767
ES.6776.1	chr11	-	1220	2	NIC	ENSMUSG00000020736.13	novel	907	3	NA	NA	-4	8	intron_retention	FALSE	canonical	3	183	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGATGCTCCTTTTCC	NA	False	NA	0	True	AATAAA	-27	NA	115382692	115381237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115382198_115382432
ES.6776.2	chr11	-	856	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	7	-5	-4	5	multi-exon	FALSE	canonical	3	183	junction_4	11.1214882097676	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTTTGATGCTCCTTT	NA	False	NA	-3	True	AATAAA	-24	NA	115382681	115381240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ES.6776.3	chr11	-	1427	1	Genic_Genomic	ENSMUSG00000020736.13	novel	NA	NA	NA	NA	10	5	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTTTGATGCTCCTTT	NA	False	NA	-3	True	AATAAA	-24	NA	115382667	115381240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_115381200_115382700
ES.6776.4	chr11	-	984	4	NIC	ENSMUSG00000020736.13	novel	858	5	NA	NA	9	-24	intron_retention	FALSE	canonical	3	183	junction_3	12.7104506432917	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAACCAAAC	NA	False	NA	-32	True	AATACA	-24	NA	115382668	115381269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115381571_115381678_115382025_115382096_115382198_115382432
ES.6776.5	chr11	-	720	5	NNC	ENSMUSG00000020736.13	novel	858	5	NA	NA	-12	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.0243424851361	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAACCAAAC	NA	False	NA	-32	True	AATACA	-24	NA	115382653	115381269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115381492_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ES.6776.6	chr11	-	1115	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	-14	-194	-3	-24	multi-exon	FALSE	canonical	3	183	junction_2	15.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAACCAAAC	NA	False	NA	-32	True	AATACA	-24	NA	115382691	115381269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115382025_115382096_115382198_115382432
ES.6776.7	chr11	-	1269	2	FSM	ENSMUSG00000020736.13	ENSMUST00000125940.2	395	2	-618	-256	-5	-24	multi-exon	FALSE	canonical	3	196	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAACCAAAC	NA	False	NA	-32	True	AATACA	-24	NA	115382646	115381269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115381571_115381678
ES.6776.8	chr11	-	820	5	FSM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	-8	24	-8	-24	multi-exon	FALSE	canonical	3	6	junction_1	83.4487117935322	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAACCAAAC	NA	False	NA	-32	True	AATACA	-24	NA	115382649	115381269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115381596_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ES.6777.1	chr11	+	180	1	Intergenic	novelGene_5502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	5740	False	NA	NA	False	NA	NA	NA	115400379	115400559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115400400_115400600
ES.6778.1	chr11	+	2228	2	Antisense	novelGene_ENSMUSG00000020738.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACACAGCGGGCAGTGG	5555	False	NA	NA	False	NA	NA	NA	115418382	115421653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_115419538_115420580
ES.6778.2	chr11	+	176	1	Intergenic	novelGene_5505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	6232	False	NA	NA	False	NA	NA	NA	115419059	115419235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115419100_115419200
ES.6778.3	chr11	+	213	1	Intergenic	novelGene_5506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTCTTTTGTT	6452	False	NA	NA	False	NA	NA	NA	115419279	115419492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115419300_115419500
ES.6779.1	chr11	+	355	1	Intergenic	novelGene_5510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAGACAAAACAAAA	9955	False	NA	NA	False	NA	NA	NA	115430106	115430461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115430100_115430500
ES.6779.10	chr11	+	2232	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	10	-8	intron_retention	FALSE	canonical	3	862	junction_15	82.5750785565228	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455269	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.11	chr11	+	3191	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	17	-8	intron_retention	FALSE	canonical	3	862	junction_13	84.4558004060243	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455276	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.12	chr11	+	3393	15	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	17	-8	intron_retention	FALSE	canonical	3	862	junction_12	86.8143985518437	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455276	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.13	chr11	+	2734	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	17	17	intron_retention	FALSE	canonical	3	37	junction_15	242.828972807205	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGAGGTTTTAAAATT	NA	False	NA	29	True	AATAAA	-35	NA	115455276	115474749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.14	chr11	+	4234	14	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	19	-2	intron_retention	FALSE	canonical	3	929	junction_3	77.4690623494423	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAATTGTTAATCCTA	NA	False	NA	10	True	AATAAA	-16	NA	115455278	115474730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115473855_115474151_115474254_115474546
ES.6779.15	chr11	+	3256	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	21	-8	intron_retention	FALSE	canonical	3	929	junction_3	72.8351895978173	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455280	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115474254_115474546
ES.6779.16	chr11	+	2123	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	21	17	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_16	299.37137842857	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGAGGTTTTAAAATT	NA	False	NA	29	True	AATAAA	-35	NA	115455280	115474749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ES.6779.17	chr11	+	2317	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	25	-11	intron_retention	FALSE	canonical	3	862	junction_15	83.1213728818153	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAATATAAGACCAATTG	NA	False	NA	1	True	AATAAA	-7	NA	115455284	115474721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.18	chr11	+	2783	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	28	-8	intron_retention	FALSE	canonical	3	862	junction_14	81.6536316127798	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455287	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115474254_115474546
ES.6779.2	chr11	+	357	2	Antisense	novelGene_ENSMUSG00000020740.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	9955	False	NA	NA	False	NA	NA	NA	115430106	115487091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_115430363_115486990
ES.6779.20	chr11	+	2020	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	2	9	junction_17	238.674584096057	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAATTGTTAATCCTAC	NA	False	NA	11	True	AATAAA	-17	NA	115455287	115474731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474546
ES.6779.21	chr11	+	2732	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	28	-10	intron_retention	FALSE	canonical	0	0	junction_8	252.188510806299	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATATAAGACCAATTGT	NA	False	NA	2	True	AATAAA	-8	NA	115455287	115474722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468841_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.22	chr11	+	2053	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	322.481433095547	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455287	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459284_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.23	chr11	+	2173	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	244.809802716666	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455287	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457648_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.24	chr11	+	2182	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	29	-8	intron_retention	FALSE	canonical	0	0	junction_14	258.688994921991	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455288	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115473702_115473855_115474151_115474254_115474546
ES.6779.25	chr11	+	2725	17	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	30	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	259.627068780877	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGACCAATTGTTAATCC	NA	False	NA	8	True	AATAAA	-14	NA	115455289	115474728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459494_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.26	chr11	+	3540	16	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	30	87	30	-8	intron_retention	FALSE	canonical	3	929	junction_3	55.5253695770381	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455289	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764
ES.6779.27	chr11	+	2417	17	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	36	-8	intron_retention	FALSE	canonical	3	37	junction_15	247.12089020356	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455295	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115474254_115474546
ES.6779.28	chr11	+	3811	14	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	38	-8	intron_retention	FALSE	canonical	3	862	junction_13	69.5761470382371	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455297	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702
ES.6779.29	chr11	+	3076	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	38	-3	intron_retention	FALSE	canonical	3	862	junction_15	80.8018167725825	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACCAATTGTTAATCCT	NA	False	NA	9	True	AATAAA	-15	NA	115455297	115474729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115474254_115474546
ES.6779.3	chr11	+	208	1	Intergenic	novelGene_5511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGAGCCGGGTTT	9957	False	NA	NA	False	NA	NA	NA	115430108	115430316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115430100_115430300
ES.6779.30	chr11	+	2750	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	38	-8	intron_retention	FALSE	canonical	3	80	junction_15	307.682395901041	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455297	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ES.6779.31	chr11	+	2998	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	41	-8	intron_retention	FALSE	canonical	3	862	junction_14	84.3900912429889	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455300	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.32	chr11	+	2322	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	41	-11	intron_retention	FALSE	non_canonical	0	0	junction_5	251.763180314234	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAATATAAGACCAATTG	NA	False	NA	1	True	AATAAA	-7	NA	115455300	115474721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459545_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.33	chr11	+	5126	12	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	0	intron_retention	FALSE	canonical	3	862	junction_9	94.2890754651148	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455302	115474732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.34	chr11	+	2984	17	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	-5	intron_retention	TRUE	canonical	1	1	junction_7	259.712754488011	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	NA	False	NA	7	True	AATAAA	-13	NA	115455302	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115469004_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.35	chr11	+	3140	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	-8	intron_retention	FALSE	canonical	3	862	junction_13	85.1862273688261	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455302	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.36	chr11	+	2570	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	-8	intron_retention	FALSE	canonical	3	862	junction_13	84.9369962580108	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455302	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.37	chr11	+	2027	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	5	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_16	235.991113297843	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTAATCCTACCAAGGA	NA	False	NA	17	True	AATAAA	-23	NA	115455302	115474737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.38	chr11	+	3284	15	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	43	-5	intron_retention	FALSE	canonical	3	37	junction_12	267.417505876073	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	NA	False	NA	7	True	AATAAA	-13	NA	115455302	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.39	chr11	+	2217	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-44	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	245.08982984073	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455306	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472446_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.4	chr11	+	226	1	Intergenic	novelGene_5513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AATGAA	-40	NA	115437762	115437988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115437800_115438000
ES.6779.40	chr11	+	3602	14	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-43	-8	intron_retention	FALSE	canonical	3	862	junction_13	67.6205913808673	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455307	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472866_115473702
ES.6779.42	chr11	+	2804	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-43	-8	intron_retention	FALSE	canonical	3	30	junction_1	241.843296228768	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455307	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455429_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.44	chr11	+	1984	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-42	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	337.347448542393	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455308	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457601_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468841_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.45	chr11	+	2083	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	240.727139216906	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455309	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455989_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.46	chr11	+	2905	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-8	intron_retention	FALSE	canonical	3	10	junction_10	263.800227444936	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455309	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.47	chr11	+	2931	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-8	intron_retention	FALSE	canonical	3	862	junction_14	82.9351921306631	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455309	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.48	chr11	+	1978	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	331.268548478531	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455309	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460783_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.5	chr11	+	163	1	Intergenic	novelGene_5514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	115439327	115439490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115439300_115439500
ES.6779.50	chr11	+	2128	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	241.596899252443	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGAGGTTTTAAAATT	NA	False	NA	29	True	AATAAA	-35	NA	115455309	115474749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455969_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.51	chr11	+	2762	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-8	intron_retention	FALSE	canonical	0	0	junction_4	372.493626428834	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455309	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459284_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ES.6779.52	chr11	+	4768	15	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-41	-5	intron_retention	FALSE	canonical	3	862	junction_12	87.4085236118309	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	NA	False	NA	7	True	AATAAA	-13	NA	115455309	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.53	chr11	+	2086	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-40	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	240.944546921814	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455310	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455383_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.54	chr11	+	2383	17	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-40	-2	intron_retention	FALSE	canonical	3	37	junction_14	250.14942409488	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAATTGTTAATCCTA	NA	False	NA	10	True	AATAAA	-16	NA	115455310	115474730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.55	chr11	+	5037	14	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-2	intron_retention	FALSE	canonical	3	862	junction_12	74.8321198005653	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAATTGTTAATCCTA	NA	False	NA	10	True	AATAAA	-16	NA	115455311	115474730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151
ES.6779.56	chr11	+	4215	12	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	929	junction_3	58.0320515600169	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455311	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764
ES.6779.57	chr11	+	1992	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	16	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	252.118964614602	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGGAGGTTTTAAAAT	NA	False	NA	28	True	AATAAA	-34	NA	115455311	115474748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.58	chr11	+	2034	20	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	360.010118355803	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455311	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474009_115474039_115474151_115474254_115474546
ES.6779.59	chr11	+	5088	9	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	929	junction_3	59.4495584508413	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455311	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115469723_115471329_115471414_115471555
ES.6779.6	chr11	+	4605	13	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-189	-8	intron_retention	TRUE	canonical	3	929	junction_3	76.6864105011804	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455070	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115474254_115474546
ES.6779.60	chr11	+	2260	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	862	junction_15	81.2335264108902	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455311	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.61	chr11	+	3212	16	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-8	intron_retention	FALSE	canonical	3	87	junction_14	244.343983396813	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455311	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115474039_115474151_115474254_115474546
ES.6779.62	chr11	+	3209	15	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-39	-5	intron_retention	FALSE	canonical	3	80	junction_12	337.763359076579	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	NA	False	NA	7	True	AATAAA	-13	NA	115455311	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ES.6779.63	chr11	+	2128	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-36	-8	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	235.082307624425	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455314	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455429_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.64	chr11	+	2472	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-35	-8	intron_retention	FALSE	canonical	1	3	junction_14	351.383146373806	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455315	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115474151_115474254_115474546
ES.6779.66	chr11	+	1834	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-34	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	252.057196782451	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455316	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471775_115472774_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.67	chr11	+	2107	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	355.051882837104	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAATTGTTAATCCTA	NA	False	NA	10	True	AATAAA	-16	NA	115455317	115474730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455429_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
ES.6779.68	chr11	+	2264	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-30	-8	intron_retention	FALSE	canonical	0	0	junction_6	332.268307808166	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455320	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460725_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.69	chr11	+	3114	17	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-16	16	intron_retention	FALSE	canonical	3	87	junction_15	236.601515937134	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGGAGGTTTTAAAAT	NA	False	NA	28	True	AATAAA	-34	NA	115455334	115474748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115474039_115474151_115474254_115474546
ES.6779.7	chr11	+	2815	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	3	-2	intron_retention	FALSE	canonical	3	862	junction_15	82.7709559076643	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAATTGTTAATCCTA	NA	False	NA	10	True	AATAAA	-16	NA	115455262	115474730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.70	chr11	+	3197	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-14	-8	intron_retention	FALSE	canonical	3	862	junction_14	69.9392117008287	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455336	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151
ES.6779.73	chr11	+	4229	5	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-386	-4	intron_retention	FALSE	canonical	3	982	junction_1	43.0660829423805	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGACCAATTGTTAATCC	125	False	NA	8	True	AATAAA	-14	NA	115468423	115474728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746
ES.6779.74	chr11	+	3576	7	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-379	-5	intron_retention	FALSE	canonical	3	962	junction_1	48.8754084950249	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	132	False	NA	7	True	AATAAA	-13	NA	115468430	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115468891_115468989_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764
ES.6779.75	chr11	+	2136	11	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-33	-8	intron_retention	FALSE	canonical	1	4	junction_8	400.823901482933	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	478	False	NA	4	True	AATAAA	-10	NA	115468776	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473848_115474039_115474151_115474254_115474546
ES.6779.76	chr11	+	4289	5	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	446	-5	intron_retention	FALSE	canonical	3	862	junction_4	89.5443325956478	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGACCAATTGTTAATC	957	False	NA	7	True	AATAAA	-13	NA	115469255	115474727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702
ES.6779.77	chr11	+	1108	10	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	503	-8	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	327.0153845439	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	1014	False	NA	4	True	AATAAA	-10	NA	115469312	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
ES.6779.78	chr11	+	3889	1	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	-484	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTGTTAATCCTACCAA	2547	False	NA	14	True	AATAAA	-20	NA	115470845	115474734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115470800_115474700
ES.6779.8	chr11	+	2164	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	6	60	6	19	multi-exon	FALSE	canonical	3	862	junction_16	81.0315439264927	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGGTTTTAAAATTGT	NA	False	NA	31	True	AATAAA	-37	NA	115455265	115474751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.6779.9	chr11	+	2015	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	10	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	252.057196782451	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAGACCAATTGTTA	NA	False	NA	4	True	AATAAA	-10	NA	115455269	115474724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ES.678.1	chr1	+	178	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAACATA	NA	False	NA	NA	False	NA	NA	NA	67822219	67822397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_67822200_67822400
ES.6780.1	chr11	+	1301	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	-8	669	-8	366	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCATTCTGTGAGTC	NA	False	NA	11	True	NA	NA	NA	115494742	115498193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ES.6780.10	chr11	+	2573	3	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	228	724	228	311	intron_retention	FALSE	canonical	3	669	junction_2	37.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCCTGTTGGAAAGTTC	NA	False	NA	8	True	AATAAA	-13	NA	115494978	115498138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115495070_115495546_115495739_115495848
ES.6780.11	chr11	+	1734	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	228	0	228	0	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTAACTTGCCCTT	NA	False	NA	NA	False	TATAAA	-15	NA	115494978	115498862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ES.6780.12	chr11	+	1001	4	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	228	366	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	326.988616859296	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCATTCTGTGAGTC	NA	False	NA	11	True	NA	NA	NA	115494978	115498193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115495070_115495546_115495739_115496795_115496964_115497643
ES.6780.2	chr11	+	1157	6	NNC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	-7	310	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	283.737484305476	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCCTGTTGGAAAGTT	NA	False	NA	7	True	AATAAA	-12	NA	115494743	115498137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643_115497879_115497965
ES.6780.3	chr11	+	1555	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	-4	411	-4	-411	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTTGGGGTTGGTG	NA	False	NA	26	True	AATAAA	-40	NA	115494746	115498451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ES.6780.4	chr11	+	2165	4	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	6	361	intron_retention	FALSE	canonical	3	642	junction_3	43.1508980207828	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCAGTCTTCCATTCTGT	NA	False	NA	6	True	NA	NA	NA	115494756	115498188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115495070_115495546_115495739_115495848_115496964_115497643
ES.6780.5	chr11	+	2721	2	NIC	ENSMUSG00000046756.11	novel	572	3	NA	NA	8	332	intron_retention	FALSE	canonical	3	642	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTTAAGGACGGAGAGT	NA	False	NA	-23	True	AATAAA	-34	NA	115494758	115498159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115496964_115497643
ES.6780.6	chr11	+	3310	2	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	23	366	intron_retention	FALSE	canonical	3	669	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCATTCTGTGAGTC	NA	False	NA	11	True	NA	NA	NA	115494773	115498193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115495739_115495848
ES.6780.7	chr11	+	1462	5	NNC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	27	339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.958504645712	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACGGAGAGTGCTGTTT	NA	False	NA	-16	True	AATAAA	-41	NA	115494777	115498166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115495070_115495546_115495739_115495848_115496136_115496795_115496964_115497643
ES.6780.8	chr11	+	1775	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	39	148	39	-148	multi-exon	FALSE	canonical	3	642	junction_4	47.0451910401053	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTGGATGCTATGGA	NA	False	NA	NA	False	AGTAAA	-26	NA	115494789	115498714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ES.6780.9	chr11	+	1208	5	NNC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	62	324	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	297.240117581729	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCTGGAAGTTAAGGA	NA	False	NA	21	True	AATAAA	-26	NA	115494812	115498151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115495070_115495546_115495739_115495848_115495913_115496776_115496964_115497643
ES.6781.1	chr11	+	171	1	Intergenic	novelGene_5519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTTTATAAAAA	NA	False	NA	NA	False	NA	NA	NA	115501385	115501556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115501400_115501600
ES.6782.1	chr11	-	4295	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-15	-3584	1	555	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAAACAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	115405212	115387623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
ES.6782.10	chr11	-	1372	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405211	115388180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389134_115392818_115392929_115393857_115394001_115405045
ES.6782.11	chr11	-	1370	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405209	115388180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389142_115392826_115392929_115393857_115394001_115405045
ES.6782.12	chr11	-	1354	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	825.422046928452	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCACCGTGTTTTGTCTT	NA	False	NA	NA	False	AGTAAA	-16	NA	115405208	115388181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389126_115392824_115392929_115393857_115394001_115405045
ES.6782.15	chr11	-	3063	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-12	-2355	4	5	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTCTTTCCCTGCTTC	NA	False	NA	-7	True	ATTAAA	-19	NA	115405209	115388852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
ES.6782.16	chr11	-	318	2	ISM	ENSMUSG00000020737.13	ENSMUST00000139980.8	650	5	13437	-4	13405	4	3prime_fragment	FALSE	canonical	3	1614	junction_1	0	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTGTCTTTCCCTGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	115391537	115388853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115389126_115391491
ES.6782.17	chr11	-	739	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-41	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCTGTCTTTCCCTGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	115405254	115388853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389126_115392813_115392929_115393857_115394001_115405045
ES.6782.19	chr11	-	705	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACCGCTGTCTTTCCCT	NA	False	NA	-12	True	ATTAAA	-14	NA	115405221	115388857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389142_115392826_115392929_115393857_115394001_115405045
ES.6782.2	chr11	-	1403	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-25	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTGTCTTTCTCTTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	115405238	115388173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115389126_115392813_115392929_115393857_115394001_115405045
ES.6782.22	chr11	-	230	1	Intergenic	novelGene_5500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	790	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTCTGGTCTCCCAGCT	NA	False	NA	NA	False	NA	NA	NA	115400312	115400082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115400100_115400300
ES.6782.23	chr11	-	181	2	Intergenic	novelGene_5501	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	115429053	115400129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115400294_115429036
ES.6782.24	chr11	-	174	1	Intergenic	novelGene_5503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115407551	115407377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115407400_115407600
ES.6782.25	chr11	-	170	2	Intergenic	novelGene_5504	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	730	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	115429053	115407378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115407532_115429036
ES.6782.26	chr11	-	4042	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	42	-3033	-5	3033	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTGGCCTTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	115427060	115410894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ES.6782.27	chr11	-	2543	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	50	-1542	3	1542	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGCCAGGCTATC	NA	False	NA	NA	False	NA	NA	NA	115427052	115412385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ES.6782.28	chr11	-	2402	1	Genic_Genomic	ENSMUSG00000020738.17	novel	NA	NA	NA	NA	10518	204	mono-exon	FALSE	NA	NA	NA	NA	NA	657	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAGCAAAGTCAGGAGG	4361	False	NA	NA	False	NA	NA	NA	115416125	115413723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_115413700_115416100
ES.6782.29	chr11	-	1158	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	72	-179	-15	179	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115427030	115413748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ES.6782.3	chr11	-	3745	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	-16	-3033	0	4	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTTGTCTTTCTCTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	115405213	115388174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
ES.6782.30	chr11	-	1116	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	-20	-45	-20	45	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTATGTTGGCTCACA	NA	False	NA	-6	True	ATTAAA	-16	NA	115427122	115413882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ES.6782.31	chr11	-	8532	3	NNC	ENSMUSG00000020738.17	novel	1051	4	NA	NA	-169	0	intron_retention	FALSE	non_canonical	0	0	junction_1	2078.5	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115426812	115413927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115419826_115420044_115421244_115425377
ES.6782.32	chr11	-	6551	4	NNC	ENSMUSG00000020738.17	novel	1051	4	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1948.41342863595	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTTCTCTTTATTCT	NA	False	NA	-54	True	AATAAA	-15	NA	115427073	115413930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115419562_115420605_115421244_115425377_115425510_115426923
ES.6782.33	chr11	-	3873	2	ISM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	2264	3	2264	-3	3prime_fragment	FALSE	canonical	3	3819	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTTCTCTTTATTCT	NA	False	NA	-54	True	AATAAA	-15	NA	115424379	115413930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115414596_115421171
ES.6782.34	chr11	-	1560	4	NNC	ENSMUSG00000020738.17	novel	911	4	NA	NA	-54	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1885.01853807566	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	False	NA	-58	True	AATAAA	-11	NA	115426697	115413934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115414596_115421171_115421244_115425377_115425510_115426002
ES.6782.35	chr11	-	2029	3	ISM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	-30	7	-30	-7	intron_retention	FALSE	canonical	3	3819	junction_1	169	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	False	NA	-58	True	AATAAA	-11	NA	115426673	115413934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115414596_115421171_115421244_115425377
ES.6782.36	chr11	-	1066	4	NNC	ENSMUSG00000020738.17	novel	911	4	NA	NA	93	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1885.01853807566	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	False	NA	-58	True	AATAAA	-11	NA	115426550	115413934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115414596_115421171_115421244_115425377_115425510_115426349
ES.6782.37	chr11	-	1673	4	ISM	ENSMUSG00000020738.17	ENSMUST00000117589.8	987	5	-60	7	-60	-7	intron_retention	FALSE	canonical	1	40	junction_3	1866.21345688714	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	False	NA	-58	True	AATAAA	-11	NA	115426703	115413934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115414596_115421171_115421244_115425377_115425510_115425895
ES.6782.38	chr11	-	942	4	FSM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	-38	7	-38	-7	multi-exon	FALSE	canonical	3	44	junction_3	1864.33300554261	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	False	NA	-58	True	AATAAA	-11	NA	115426681	115413934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426604
ES.6782.41	chr11	-	765	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	-139	425	-139	-425	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTCTCTCTTTCTTT	NA	False	NA	NA	False	CATAAA	-24	NA	115427241	115414352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ES.6782.42	chr11	-	4042	5	NNC	ENSMUSG00000020738.17	novel	1051	4	NA	NA	-13	-427	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2066.31972054181	699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTGCTCTCTCTTTCT	NA	False	NA	NA	False	CATAAA	-22	NA	115427028	115414354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115418030_115418308_115418367_115421171_115421244_115425377_115425510_115426923
ES.6782.43	chr11	-	2861	2	NNC	ENSMUSG00000020738.17	novel	397	2	NA	NA	2	1930	intron_retention	FALSE	non_canonical	0	0	junction_1	0	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	115427000	115418844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115418934_115424228
ES.6782.44	chr11	-	211	1	Intergenic	novelGene_5507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	682	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATCACAGCATCTCTG	449	False	NA	NA	False	NA	NA	NA	115420037	115419826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115419800_115420000
ES.6782.45	chr11	-	177	2	Intergenic	novelGene_5508	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115450485	115419858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115420006_115450455
ES.6782.46	chr11	-	1239	1	Intergenic	novelGene_5509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAAAGTGTCAG	NA	False	NA	NA	False	NA	NA	NA	115424557	115423318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115423300_115424600
ES.6782.47	chr11	-	178	1	Intergenic	novelGene_5512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	115431544	115431366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115431400_115431500
ES.6782.48	chr11	-	198	1	Intergenic	novelGene_5515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGACACAAGGCGCT	NA	False	NA	NA	False	AATAAA	-15	NA	115444226	115444028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115444000_115444200
ES.6782.49	chr11	-	281	1	Intergenic	novelGene_5516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTAGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	115446123	115445842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115445800_115446100
ES.6782.5	chr11	-	3550	5	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	726.210842317849	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	115405210	115388178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115390294_115390481_115391511_115392830_115392929_115393857_115394001_115405045
ES.6782.50	chr11	-	203	1	Intergenic	novelGene_5517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	115450485	115450282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115450300_115450500
ES.6782.6	chr11	-	3616	4	NNC	ENSMUSG00000020737.13	novel	696	4	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	825.422046928452	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405209	115388180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115391375_115392813_115392929_115393857_115394001_115405045
ES.6782.8	chr11	-	5057	3	NIC	ENSMUSG00000020737.13	novel	696	4	NA	NA	2	-2	intron_retention	FALSE	canonical	3	1689	junction_1	59	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405211	115388180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115392929_115393857_115394001_115405045
ES.6782.9	chr11	-	1047	6	NNC	ENSMUSG00000020737.13	novel	597	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	836.725283471224	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	115405209	115388180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115388621_115388981_115389126_115391491_115391550_115392830_115392929_115393857_115394001_115405045
ES.6783.1	chr11	-	4006	1	Intergenic	novelGene_5518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATACACTCATATGTATA	7205	False	NA	NA	False	NA	NA	NA	115466869	115462863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115462900_115466900
ES.6783.10	chr11	-	3675	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	102.857436988047	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3544	False	NA	-1	True	AATAAA	-16	NA	115494714	115475079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.101	chr11	-	6238	12	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	362	junction_2	45.5508071614308	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479799_115479880_115481360_115481712_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.102	chr11	-	3592	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	106.554190699172	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3535	False	NA	-4	True	AATAAA	-13	NA	115494723	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.104	chr11	-	3231	15	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	143.440683182411	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.106	chr11	-	3489	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	143.792914789812	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGGCATCTTTCAATA	3549	False	NA	-5	True	AATAAA	-12	NA	115494709	115475083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482131_115482476_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.107	chr11	-	3777	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	-23	62	-23	47	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTTGTACCACCTCCT	3358	False	NA	34	True	NA	NA	NA	115494900	115475142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.108	chr11	-	3544	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	122.187611892532	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGAGGTCACTGCTT	3547	False	NA	-1	True	ATTAAA	-26	NA	115494711	115475177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482405_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.109	chr11	-	6675	9	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	12	intron_retention	FALSE	canonical	3	362	junction_1	45.7368492028036	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACTGAGGTCACTGCTT	3547	False	NA	-1	True	ATTAAA	-26	NA	115494711	115475177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115477023_115477141_115479372_115479681_115481360_115481712_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.11	chr11	-	4365	14	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	32	junction_5	108.475340092963	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3549	False	NA	-2	True	AATAAA	-15	NA	115494709	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.110	chr11	-	3499	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-3	6	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTACTACTGAGGTCA	3536	False	NA	-7	True	ATTAAA	-20	NA	115494722	115475183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.111	chr11	-	3574	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	6	intron_retention	FALSE	non_canonical	0	0	junction_9	127.59669100551	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTACTACTGAGGTCA	3549	False	NA	-7	True	ATTAAA	-20	NA	115494709	115475183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479963_115481221_115481366_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.112	chr11	-	3535	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.112844428533	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTACTACTGAGGTCA	3548	False	NA	-7	True	ATTAAA	-20	NA	115494710	115475183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482182_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.113	chr11	-	5124	14	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	1	1	intron_retention	FALSE	canonical	3	18	junction_3	111.526206223274	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTCACTACTACTGA	3549	False	NA	-12	True	ATTAAA	-15	NA	115494709	115475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.114	chr11	-	6401	10	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_5	159.866611064767	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTCACTACTACTGA	3548	False	NA	-12	True	ATTAAA	-15	NA	115494710	115475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088_115482193_115482400_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.115	chr11	-	3619	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.112844428533	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGCTCACTACTACTGA	3525	False	NA	-12	True	ATTAAA	-15	NA	115494733	115475188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482400_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.116	chr11	-	3475	17	FSM	ENSMUSG00000020740.14	ENSMUST00000156173.8	3751	17	167	109	0	0	multi-exon	FALSE	canonical	3	18	junction_3	101.135564188618	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCACTACTACTG	3548	False	NA	-13	True	ATTAAA	-14	NA	115494710	115475189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.118	chr11	-	4382	15	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-11	0	intron_retention	FALSE	canonical	3	10	junction_8	109.82920413821	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCACTACTACTG	3528	False	NA	-13	True	ATTAAA	-14	NA	115494730	115475189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115481364_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.119	chr11	-	4285	15	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_8	146.376523850971	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCACTACTACTG	3548	False	NA	-13	True	ATTAAA	-14	NA	115494710	115475189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.12	chr11	-	3537	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	139.678519783426	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3533	False	NA	-2	True	AATAAA	-15	NA	115494725	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479792_115479876_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.120	chr11	-	3517	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	intron_retention	FALSE	canonical	1	8	junction_1	135.723164359478	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGCTCACTACTAC	3548	False	NA	-15	True	ATTAAA	-12	NA	115494710	115475191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115475989_115476523_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481364_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.121	chr11	-	3473	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.11095328271	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGCTCACTACTAC	3547	False	NA	-15	True	ATTAAA	-12	NA	115494711	115475191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479733_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.122	chr11	-	3582	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	101.053822292875	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGCTCACTACTAC	3554	False	NA	-15	True	ATTAAA	-12	NA	115494704	115475191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483407_115485531_115485608_115485734_115485820_115494653
ES.6783.123	chr11	-	3471	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	167	178	0	-69	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTACTTCGGTGCTGG	3548	False	NA	-82	True	AATAAA	-19	NA	115494710	115475258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.124	chr11	-	3389	17	NNC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	-72	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	130.655977188187	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTTACTTCGGTGC	3548	False	NA	-85	True	AATAAA	-16	NA	115494710	115475261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.125	chr11	-	3483	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-73	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	102.857436988047	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGGTTACTTCGGTG	3553	False	NA	-86	True	AATAAA	-15	NA	115494705	115475262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.126	chr11	-	3502	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-12	-73	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	102.672549124632	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGGTTACTTCGGTG	3527	False	NA	-86	True	AATAAA	-15	NA	115494731	115475262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476681_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.127	chr11	-	3468	15	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-9	-550	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	132.215057495625	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGGTCACTCCTTCT	3530	False	NA	0	True	NA	NA	NA	115494728	115475739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478020_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.128	chr11	-	2915	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-552	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_8	118.045475876884	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTGGTCACTCCTT	3548	False	NA	-2	True	NA	NA	NA	115494710	115475741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.129	chr11	-	6807	8	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-552	intron_retention	FALSE	canonical	3	362	junction_2	51.5403547064367	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTGGTCACTCCTT	3547	False	NA	-2	True	NA	NA	NA	115494711	115475741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115481360_115481712_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.13	chr11	-	3576	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_8	118.045475876884	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.130	chr11	-	4953	13	NNC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	-553	intron_retention	FALSE	non_canonical	0	0	junction_8	153.510224053282	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTTGGTCACTCCT	3548	False	NA	-3	True	NA	NA	NA	115494710	115475742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115481370_115481712_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.131	chr11	-	3023	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	131	662	-27	-553	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTTGGTCACTCCT	3512	False	NA	-3	True	NA	NA	NA	115494746	115475742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.132	chr11	-	6015	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	-553	intron_retention	FALSE	canonical	3	362	junction_2	46.8448977418507	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCTTTGGTCACTCCT	3546	False	NA	-3	True	NA	NA	NA	115494712	115475742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.134	chr11	-	2926	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-554	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTTTGGTCACTCC	3549	False	NA	-4	True	NA	NA	NA	115494709	115475743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.135	chr11	-	4850	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-554	intron_retention	FALSE	canonical	3	362	junction_1	43.216366355672	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTTTGGTCACTCC	3547	False	NA	-4	True	NA	NA	NA	115494711	115475743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115477023_115477141_115479372_115479681_115479963_115481221_115481360_115481712_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.136	chr11	-	4230	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-554	intron_retention	FALSE	canonical	3	32	junction_8	100.795811200444	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTTTGGTCACTCC	3549	False	NA	-4	True	NA	NA	NA	115494709	115475743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.137	chr11	-	4023	14	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-555	intron_retention	FALSE	canonical	3	358	junction_8	43.9293407900519	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTGCTTTGGTCACTC	3547	False	NA	-5	True	NA	NA	NA	115494711	115475744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.138	chr11	-	3099	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-559	intron_retention	FALSE	canonical	0	0	junction_4	105.746153068983	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATCCTGCTTTGGTC	3549	False	NA	-9	True	NA	NA	NA	115494709	115475748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478020_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485820_115494653
ES.6783.139	chr11	-	4257	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-26	-559	intron_retention	FALSE	canonical	3	358	junction_7	43.9932917866147	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATCCTGCTTTGGTC	3513	False	NA	-9	True	NA	NA	NA	115494745	115475748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.14	chr11	-	4900	13	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	121.108164464664	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.140	chr11	-	3694	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-560	intron_retention	FALSE	canonical	3	352	junction_4	44.1255745178532	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCATCCTGCTTTGGT	3548	False	NA	-10	True	NA	NA	NA	115494710	115475749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.141	chr11	-	4570	14	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-560	intron_retention	FALSE	canonical	3	93	junction_10	92.281342392957	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCATCCTGCTTTGGT	3548	False	NA	-10	True	NA	NA	NA	115494710	115475749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.142	chr11	-	3661	15	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-13	-560	intron_retention	FALSE	canonical	3	10	junction_8	130.143111964624	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCATCCTGCTTTGGT	3526	False	NA	-10	True	NA	NA	NA	115494732	115475749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481364_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.143	chr11	-	4100	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-560	intron_retention	FALSE	canonical	3	358	junction_7	44.91628014676	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCATCCTGCTTTGGT	3547	False	NA	-10	True	NA	NA	NA	115494711	115475749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.144	chr11	-	4211	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-588	intron_retention	FALSE	canonical	3	352	junction_6	43.8023845114497	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTCAGGGGAGGACAC	3548	False	NA	-38	True	AATAAA	-18	NA	115494710	115475777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.145	chr11	-	3441	14	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	-1	-589	intron_retention	FALSE	canonical	3	18	junction_3	133.396459415591	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTCAGGGGAGGACA	3543	False	NA	-39	True	AATAAA	-17	NA	115494715	115475778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115479372_115479681_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.146	chr11	-	3014	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-5	-590	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	101.053822292875	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTTTCAGGGGAGGAC	3534	False	NA	-40	True	AATAAA	-16	NA	115494724	115475779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483407_115485531_115485608_115485734_115485820_115494653
ES.6783.148	chr11	-	3737	15	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-10	-591	intron_retention	FALSE	non_canonical	0	0	junction_8	132.060920543111	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCCTTTCAGGGGAGGA	3529	False	NA	-41	True	AATAAA	-15	NA	115494729	115475780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.149	chr11	-	3086	16	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	1	-592	intron_retention	FALSE	canonical	3	18	junction_3	122.715823483907	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGCCTTTCAGGGGAGG	3549	False	NA	-42	True	AATAAA	-14	NA	115494709	115475781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.15	chr11	-	3833	16	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_3	124.391568131535	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.150	chr11	-	2663	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	167	986	0	463	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGAGTACTGTAGTCTT	3548	False	NA	NA	False	ACTAAA	-28	NA	115494710	115476066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.152	chr11	-	2673	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	458	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	102.857436988047	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTGTGGAGTACTGTA	3554	False	NA	NA	False	ACTAAA	-23	NA	115494704	115476071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.153	chr11	-	2306	15	NIC	ENSMUSG00000020740.14	novel	3582	16	NA	NA	0	457	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	110.066978680794	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACTGTGGAGTACTGT	3548	False	NA	NA	False	ACTAAA	-22	NA	115494710	115476072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.154	chr11	-	1035	3	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-380	739	intron_retention	FALSE	canonical	3	352	junction_2	7	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATTGTTTGTGTGCCTT	NA	False	NA	NA	False	NA	NA	NA	115479233	115477671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115478543_115478761_115478830_115479137
ES.6783.155	chr11	-	4383	1	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-6990	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAGCGAGCTTGAGA	3543	False	NA	NA	False	NA	NA	NA	115494715	115490332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115490300_115494700
ES.6783.16	chr11	-	5201	12	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	358	junction_6	44.2849525775222	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.18	chr11	-	5620	14	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	352	junction_4	45.6623833635288	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3550	False	NA	-2	True	AATAAA	-15	NA	115494708	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.2	chr11	-	7902	1	Antisense	novelGene_ENSMUSG00000020739.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTGAGCAGTGTGAGC	990	False	NA	NA	False	NA	NA	NA	115473084	115465182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_115465200_115473100
ES.6783.20	chr11	-	5750	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	93	junction_9	96.0475865854467	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.21	chr11	-	4650	1	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	151	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	NA	False	NA	-2	True	AATAAA	-15	NA	115479730	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115475100_115479700
ES.6783.22	chr11	-	3406	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	154.514580397953	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3536	False	NA	-2	True	AATAAA	-15	NA	115494722	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.23	chr11	-	3638	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.112844428533	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482182_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.24	chr11	-	6472	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_4	47.4656470968319	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3552	False	NA	-2	True	AATAAA	-15	NA	115494706	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115477023_115477141_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.25	chr11	-	4908	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	352	junction_6	43.8023845114497	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.27	chr11	-	5298	14	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_8	44.8981753955119	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.28	chr11	-	3271	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	106.915459852893	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3512	False	NA	-2	True	AATAAA	-15	NA	115494746	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115478439_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.29	chr11	-	5419	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	352	junction_5	45.029752069366	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.3	chr11	-	7700	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	167	-4051	0	4051	multi-exon	TRUE	canonical	3	352	junction_6	42.6075385788712	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAGACTAAATG	3548	False	NA	NA	False	NA	NA	NA	115494710	115471029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.30	chr11	-	3670	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	104.627893478508	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3536	False	NA	-2	True	AATAAA	-15	NA	115494722	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479972_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.31	chr11	-	3647	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_8	98.0678973976704	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3536	False	NA	-2	True	AATAAA	-15	NA	115494722	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.32	chr11	-	3663	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	102.672549124632	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476681_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.33	chr11	-	3863	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_10	126.084874412261	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.34	chr11	-	3627	17	FSM	ENSMUSG00000020740.14	ENSMUST00000156173.8	3751	17	124	0	-34	0	multi-exon	FALSE	canonical	3	18	junction_3	101.135564188618	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3505	False	NA	-2	True	AATAAA	-15	NA	115494753	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.35	chr11	-	4909	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	358	junction_7	43.9932917866147	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3529	False	NA	-2	True	AATAAA	-15	NA	115494729	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.36	chr11	-	6447	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	93	junction_6	110.782068344415	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3542	False	NA	-2	True	AATAAA	-15	NA	115494716	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.37	chr11	-	3678	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	122.187611892532	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3515	False	NA	-2	True	AATAAA	-15	NA	115494743	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482400_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.38	chr11	-	6235	11	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	180.693359036795	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115481370_115481712_115481794_115482088_115482187_115482396_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.39	chr11	-	5808	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_7	46.1717807035134	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.4	chr11	-	3984	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	-113	-55	-113	55	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTCTGAAACTTGTGT	3268	False	NA	53	True	AATACA	-37	NA	115494990	115475025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.40	chr11	-	4323	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-10	0	intron_retention	FALSE	canonical	3	93	junction_11	89.6162168724535	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3529	False	NA	-2	True	AATAAA	-15	NA	115494729	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.41	chr11	-	3645	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	105.1048397732	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3543	False	NA	-2	True	AATAAA	-15	NA	115494715	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481347_115481708_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.42	chr11	-	3578	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	105.11095328271	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479728_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.43	chr11	-	6237	11	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_4	132.139169060502	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3552	False	NA	-2	True	AATAAA	-15	NA	115494706	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115481370_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.44	chr11	-	3597	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	106.68387361213	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3518	False	NA	-2	True	AATAAA	-15	NA	115494740	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.45	chr11	-	3913	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	352	junction_6	43.126171481673	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.46	chr11	-	3681	16	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	-6	0	intron_retention	FALSE	canonical	3	18	junction_3	104.451881531907	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3533	False	NA	-2	True	AATAAA	-15	NA	115494725	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.48	chr11	-	4833	13	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	140.611165986205	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482453_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.49	chr11	-	4599	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1758	0	intron_retention	FALSE	canonical	3	352	junction_5	7.36525040852291	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	9725	False	NA	-2	True	AATAAA	-15	NA	115482105	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478830_115479137_115479372_115479681_115479799_115479880_115481360_115481712_115481794_115482088
ES.6783.5	chr11	-	4992	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	1	intron_retention	FALSE	canonical	3	352	junction_6	44.9963717358162	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3547	False	NA	-1	True	AATAAA	-16	NA	115494711	115475079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.50	chr11	-	6229	12	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	93	junction_8	100.266751655787	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3558	False	NA	-2	True	AATAAA	-15	NA	115494700	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479799_115479880_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.51	chr11	-	2711	6	NNC	ENSMUSG00000020740.14	novel	3582	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	174.54237307886	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3552	False	NA	-2	True	AATAAA	-15	NA	115494706	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477973_115485562_115485608_115485734_115485820_115494653
ES.6783.52	chr11	-	4696	14	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	116.418902875545	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.53	chr11	-	3704	18	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_16	129.021899377707	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115488572_115488627_115494653
ES.6783.54	chr11	-	4865	15	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	18	junction_3	127.505662139181	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3549	False	NA	-2	True	AATAAA	-15	NA	115494709	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.55	chr11	-	3869	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	352	junction_5	43.2623007555847	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.56	chr11	-	3622	17	NNC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	172.059764326236	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3548	False	NA	-2	True	AATAAA	-15	NA	115494710	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481370_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485827_115494653
ES.6783.57	chr11	-	3746	18	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	141.344287512643	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3547	False	NA	-2	True	AATAAA	-15	NA	115494711	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115486079_115486235_115494653
ES.6783.58	chr11	-	3894	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.605202535128	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3552	False	NA	-2	True	AATAAA	-15	NA	115494706	115475080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477620_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.59	chr11	-	6515	10	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	358	junction_5	49.0920023156321	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3526	False	NA	-3	True	AATAAA	-14	NA	115494732	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115481360_115481712_115481794_115482088_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.6	chr11	-	3603	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	93	junction_13	83.8961178705546	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3536	False	NA	-1	True	AATAAA	-16	NA	115494722	115475079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.60	chr11	-	6025	12	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	358	junction_6	46.5506034083979	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3534	False	NA	-3	True	AATAAA	-14	NA	115494724	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.61	chr11	-	4329	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	93	junction_11	89.6537841945791	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3537	False	NA	-3	True	AATAAA	-14	NA	115494721	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.62	chr11	-	3584	17	NNC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	145.593988114208	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3543	False	NA	-3	True	AATAAA	-14	NA	115494715	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482400_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.63	chr11	-	3661	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	146.917706557106	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3552	False	NA	-3	True	AATAAA	-14	NA	115494706	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477044_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482400_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.64	chr11	-	4607	14	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	352	junction_3	44.9095079612931	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3548	False	NA	-3	True	AATAAA	-14	NA	115494710	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115477023_115477141_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.65	chr11	-	3549	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.518999872526	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3547	False	NA	-3	True	AATAAA	-14	NA	115494711	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477093_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.67	chr11	-	4196	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-12	-1	combination_of_known_junctions	FALSE	canonical	3	358	junction_9	42.9181113950077	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCATCTTTCAATACA	3527	False	NA	-3	True	AATAAA	-14	NA	115494731	115475081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.68	chr11	-	3545	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	105.074954645482	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3534	False	NA	-4	True	AATAAA	-13	NA	115494724	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115477927_115478246_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.69	chr11	-	3427	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_14	117.727569465461	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115494653
ES.6783.7	chr11	-	3727	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-13	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.112844428533	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3526	False	NA	-1	True	AATAAA	-16	NA	115494732	115475079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482400_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.70	chr11	-	4997	12	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	10	junction_5	146.642027732573	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3529	False	NA	-4	True	AATAAA	-13	NA	115494729	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115481364_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.71	chr11	-	3338	12	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.42019662895	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3553	False	NA	-4	True	AATAAA	-13	NA	115494705	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476524_115478432_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.72	chr11	-	3755	18	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	131.490128828132	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3533	False	NA	-4	True	AATAAA	-13	NA	115494725	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485263_115485357_115485531_115485608_115485734_115485820_115494653
ES.6783.73	chr11	-	3442	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	105.074954645482	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3545	False	NA	-4	True	AATAAA	-13	NA	115494713	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478439_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.75	chr11	-	3581	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	160.218378748784	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115481221_115481369_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485827_115494653
ES.6783.76	chr11	-	3643	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	105.1048397732	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3561	False	NA	-4	True	AATAAA	-13	NA	115494697	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481369_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.77	chr11	-	3848	18	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	139.861251067524	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3342	False	NA	-4	True	AATAAA	-13	NA	115494916	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115488572_115488627_115494653
ES.6783.78	chr11	-	3866	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	93	junction_12	85.4453951688185	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3533	False	NA	-4	True	AATAAA	-13	NA	115494725	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.79	chr11	-	4976	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	362	junction_2	43.6350871814568	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3551	False	NA	-4	True	AATAAA	-13	NA	115494707	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.8	chr11	-	5240	12	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	358	junction_6	44.2849525775222	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTTCAATACAGA	3552	False	NA	-1	True	AATAAA	-16	NA	115494706	115475079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.81	chr11	-	4118	15	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	107.920251168374	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3539	False	NA	-4	True	AATAAA	-13	NA	115494719	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.83	chr11	-	3678	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	132.834012963548	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3525	False	NA	-4	True	AATAAA	-13	NA	115494733	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479785_115479880_115479985_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.84	chr11	-	5229	11	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	358	junction_5	45.0343202457859	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3534	False	NA	-4	True	AATAAA	-13	NA	115494724	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115477023_115477141_115479372_115479681_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.85	chr11	-	4926	15	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	18	junction_3	107.598459893386	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3545	False	NA	-4	True	AATAAA	-13	NA	115494713	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.86	chr11	-	4583	14	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	10	junction_7	114.069375755314	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3549	False	NA	-4	True	AATAAA	-13	NA	115494709	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481364_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.87	chr11	-	6273	3	ISM	ENSMUSG00000020740.14	ENSMUST00000148782.8	932	10	12967	-4220	-1400	-2	intron_retention	FALSE	canonical	3	368	junction_1	3.5	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	9909	False	NA	-4	True	AATAAA	-13	NA	115481747	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115479372_115479681_115479799_115479880
ES.6783.88	chr11	-	2203	7	NNC	ENSMUSG00000020740.14	novel	966	8	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	160.051467416648	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115477973_115485562_115485608_115485734_115485820_115494653
ES.6783.89	chr11	-	4173	16	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-10	-2	intron_retention	FALSE	non_canonical	0	0	junction_15	104.643436912636	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3529	False	NA	-4	True	AATAAA	-13	NA	115494729	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485817_115494653
ES.6783.90	chr11	-	6487	11	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	352	junction_3	47.1488069838464	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478830_115479137_115479372_115479681_115479799_115479880_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.91	chr11	-	4579	15	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-2	intron_retention	FALSE	canonical	3	352	junction_6	43.4504761487262	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3557	False	NA	-4	True	AATAAA	-13	NA	115494701	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.92	chr11	-	5543	11	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	93	junction_7	104.240299308857	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3526	False	NA	-4	True	AATAAA	-13	NA	115494732	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.93	chr11	-	3588	19	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	148.241346842169	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3553	False	NA	-4	True	AATAAA	-13	NA	115494705	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478332_115478439_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115488572_115488627_115494653
ES.6783.94	chr11	-	3696	17	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	134.681510887724	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3547	False	NA	-4	True	AATAAA	-13	NA	115494711	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478233_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483407_115485531_115485608_115485734_115485820_115494653
ES.6783.95	chr11	-	3521	17	NIC	ENSMUSG00000020740.14	novel	3751	17	NA	NA	-2	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	120.441748757439	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3550	False	NA	-4	True	AATAAA	-13	NA	115494708	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.96	chr11	-	4964	13	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	intron_retention	FALSE	canonical	3	11	junction_1	152.02567400132	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476681_115476911_115477023_115477141_115478543_115478761_115479372_115479681_115479785_115479880_115479963_115481221_115481360_115481712_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.97	chr11	-	5507	13	NNC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_4	120.637427396679	644	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3548	False	NA	-4	True	AATAAA	-13	NA	115494710	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478020_115478231_115479372_115479681_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ES.6783.98	chr11	-	5607	12	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	358	junction_8	45.8673978095355	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGCATCTTTCAATAC	3551	False	NA	-4	True	AATAAA	-13	NA	115494707	115475082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115476667_115476911_115477023_115477141_115478543_115478761_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115483357_115485531_115485608_115485734_115485820_115494653
ES.6784.10	chr11	-	4895	2	ISM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-14	-1256	2	-3	intron_retention	FALSE	canonical	3	406	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115500262_115500364
ES.6784.11	chr11	-	1306	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	134.525239267581	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503628
ES.6784.12	chr11	-	1165	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.603510723881	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503320	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499325_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503224
ES.6784.13	chr11	-	1438	5	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	33	junction_4	150.308017084918	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503756	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503628
ES.6784.14	chr11	-	2520	4	NNC	ENSMUSG00000020743.16	novel	1656	5	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_2	164.495187366277	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499980_115500105_115500258_115500361_115500475_115502728
ES.6784.15	chr11	-	1385	5	NIC	ENSMUSG00000020743.16	novel	1271	6	NA	NA	2	-3	intron_retention	FALSE	canonical	2	11	junction_3	152.687589541521	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115499440_115499886_115500262_115500364_115500416_115502728_115502861_115503610
ES.6784.16	chr11	-	2304	3	NIC	ENSMUSG00000020743.16	novel	1656	5	NA	NA	2	-3	intron_retention	FALSE	canonical	3	339	junction_1	21.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503751	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115499440_115499886_115500475_115502728
ES.6784.17	chr11	-	1498	6	NNC	ENSMUSG00000020743.16	novel	869	7	NA	NA	3	-3	intron_retention	FALSE	canonical	1	4	junction_3	177.207900501078	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115500262_115500364_115500475_115501242_115501309_115502728_115502861_115503628
ES.6784.18	chr11	-	1765	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-3	intron_retention	FALSE	canonical	3	302	junction_1	42.1040378111174	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ES.6784.19	chr11	-	1450	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	3	-3	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
ES.6784.2	chr11	-	2778	2	NIC	ENSMUSG00000020743.16	novel	1656	5	NA	NA	20	0	intron_retention	FALSE	canonical	3	382	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503775	115498743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115500475_115502728
ES.6784.20	chr11	-	1630	8	Fusion	ENSMUSG00000020744.14_ENSMUSG00000020743.16	novel	869	7	NA	NA	204	-3	multi-exon	FALSE	canonical	1	1	junction_5	137.550436018864	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	5856	False	NA	-3	True	AATAAA	-15	NA	115508527	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115506286_115506418_115507346_115507478_115508343
ES.6784.21	chr11	-	4254	2	NIC	ENSMUSG00000020743.16	novel	621	4	NA	NA	3	-3	intron_retention	FALSE	canonical	3	324	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503750	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115502861_115503610
ES.6784.22	chr11	-	1219	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	146.129531580718	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502762_115503610
ES.6784.23	chr11	-	1392	5	NNC	ENSMUSG00000020743.16	novel	1271	6	NA	NA	-36	-3	intron_retention	FALSE	canonical	0	0	junction_4	185.063502614643	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503365	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115500262_115500364_115500416_115502728_115502861_115503224
ES.6784.25	chr11	-	1351	5	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	161.545659180307	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499979_115500262_115500364_115500475_115502728_115502861_115503610
ES.6784.27	chr11	-	1262	6	FSM	ENSMUSG00000020743.16	ENSMUST00000137304.8	1271	6	5	4	-2	-4	multi-exon	FALSE	canonical	2	11	junction_4	137.166468205608	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTGCGTATTTCCATAG	NA	False	NA	-4	True	AATAAA	-14	NA	115503748	115498747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500416_115502728_115502861_115503610
ES.6784.28	chr11	-	1340	5	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-8	intron_retention	FALSE	canonical	2	3	junction_4	163.14487426824	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAACTGCGTATTTCC	NA	False	NA	-8	True	AATAAA	-10	NA	115503744	115498751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502762_115503610
ES.6784.3	chr11	-	1888	4	NNC	ENSMUSG00000020743.16	novel	621	4	NA	NA	-26	-3	intron_retention	FALSE	canonical	0	0	junction_3	185.991636610061	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503355	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115500262_115500364_115500475_115502728_115502861_115503224
ES.6784.31	chr11	-	1458	5	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-1	-8	intron_retention	FALSE	canonical	0	0	junction_4	164.429886273755	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAACTGCGTATTTCC	NA	False	NA	-8	True	AATAAA	-10	NA	115503754	115498751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503601
ES.6784.32	chr11	-	1348	6	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-6	36	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	147.293448598368	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTGTCTATAAAATGG	NA	False	NA	NA	False	NA	NA	NA	115503736	115498938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115503091_115503610
ES.6784.33	chr11	-	4859	1	Genic_Genomic	ENSMUSG00000020744.14_ENSMUSG00000020743.16	novel	NA	NA	NA	NA	2062	1117	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGCCTTGGCATTCAG	7714	False	NA	NA	False	NA	NA	NA	115506669	115501810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_115501800_115506700
ES.6784.34	chr11	-	3115	5	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	36	12	intron_retention	FALSE	canonical	3	13	junction_4	63.8709636689474	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCATTGTAAGGATACTA	NA	False	NA	-1	True	AATAAA	-29	NA	115519071	115504991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115508528_115511702_115511874_115514697_115514854_115518890
ES.6784.35	chr11	-	2221	7	NNC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	-2	10	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_5	56.1654302534536	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACCATTGTAAGGATAC	NA	False	NA	-3	True	AATAAA	-27	NA	115518935	115504993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514794_115515024_115515195_115518890
ES.6784.36	chr11	-	2108	6	NIC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	0	10	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	57.631241527491	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACCATTGTAAGGATAC	NA	False	NA	-3	True	AATAAA	-27	NA	115518932	115504993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115518890
ES.6784.37	chr11	-	2307	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	1	-1	1	1	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGACTGCAGACCATTG	NA	False	NA	-12	True	AATAAA	-18	NA	115518970	115505002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ES.6784.38	chr11	-	2510	8	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	64.7232727912945	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGACTGCAGACCATTG	NA	False	NA	-12	True	AATAAA	-18	NA	115518936	115505002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462_115518700_115518890
ES.6784.39	chr11	-	2529	8	NNC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.2373592099054	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTGACTGCAGACCAT	NA	False	NA	-14	True	AATAAA	-16	NA	115518957	115505004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115509269_115509507_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ES.6784.4	chr11	-	1360	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	9	3	9	-3	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503786	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ES.6784.40	chr11	-	5985	3	NIC	ENSMUSG00000020744.14	novel	1055	6	NA	NA	-1092	-2	intron_retention	FALSE	canonical	3	151	junction_2	9.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTGACTGCAGACCA	NA	False	NA	-15	True	AATAAA	-15	NA	115514743	115505005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115511874_115514697
ES.6784.41	chr11	-	1705	3	NNC	ENSMUSG00000020744.14	novel	826	5	NA	NA	297	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	83.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAAGCTGACTGCAGAC	5949	False	NA	-17	True	AATAAA	-13	NA	115508434	115505007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508270
ES.6784.42	chr11	-	2581	8	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	65.2083004607511	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGAAGCTGACTGCAG	NA	False	NA	-19	True	AATAAA	-11	NA	115518958	115505009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462_115518756_115518890
ES.6784.43	chr11	-	2094	6	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.2810256321532	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGAAGCTGACTGCAG	NA	False	NA	-19	True	AATAAA	-11	NA	115518935	115505009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115514697_115514854_115515024_115515195_115518890
ES.6784.44	chr11	-	1760	8	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	2	211	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	65.2083004607511	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518936	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462_115518756_115518890
ES.6784.45	chr11	-	1649	8	NNC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	-6	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	69.2569896273647	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518925	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518562_115518756_115518890
ES.6784.46	chr11	-	1418	7	NNC	ENSMUSG00000020744.14	novel	2307	7	NA	NA	-1	211	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	48.9750503374479	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518957	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508458_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ES.6784.47	chr11	-	823	3	NNC	ENSMUSG00000020744.14	novel	826	5	NA	NA	854	211	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	83.5	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	6506	False	NA	-12	True	ATTAAA	-12	NA	115507877	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115507794
ES.6784.48	chr11	-	1522	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	-20	805	-20	211	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518991	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ES.6784.49	chr11	-	4218	8	NIC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	14	211	intron_retention	FALSE	canonical	0	0	junction_4	72.6211865414899	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518905	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115514419_115514697_115514854_115515024_115515195_115518462_115518700_115518890
ES.6784.5	chr11	-	5008	1	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	-1	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503754	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115498700_115503800
ES.6784.50	chr11	-	1899	7	ISM	ENSMUSG00000020744.14	ENSMUST00000178003.8	2614	8	181	799	-2	211	intron_retention	FALSE	canonical	2	19	junction_6	50.5854612402505	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518940	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462
ES.6784.51	chr11	-	1648	7	NNC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	30	211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	57.531875222929	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518744	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518517
ES.6784.52	chr11	-	3909	8	NNC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	14	211	intron_retention	FALSE	canonical	0	0	junction_5	72.7946510705958	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGTGTCACTCCTAT	NA	False	NA	-12	True	ATTAAA	-12	NA	115518905	115505808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115512373_115514419_115514697_115514854_115515024_115515195_115518462
ES.6784.53	chr11	-	1582	8	NNC	ENSMUSG00000020744.14	novel	2614	8	NA	NA	-1	210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	66.8256946794252	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTTGTGTCACTCCTA	NA	False	NA	-13	True	ATTAAA	-11	NA	115518957	115505809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115513579_115513675_115514697_115514854_115515024_115515195_115518890
ES.6784.54	chr11	-	5526	5	NIC	ENSMUSG00000020744.14	novel	1055	6	NA	NA	-2	207	intron_retention	FALSE	canonical	3	102	junction_4	24.8432586429397	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCATTCCTTGTGTCACTC	NA	False	NA	-16	True	ATTAAA	-8	NA	115518958	115505812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115506418_115507346_115511874_115514697_115514854_115515024_115515195_115518890
ES.6784.6	chr11	-	1916	4	FSM	ENSMUSG00000020743.16	ENSMUST00000142637.2	621	4	-39	-1256	-16	-3	multi-exon	FALSE	canonical	3	324	junction_3	34.4222150491349	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503769	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115500262_115500364_115500475_115502728_115502861_115503610
ES.6784.7	chr11	-	1873	4	NNC	ENSMUSG00000020743.16	novel	621	4	NA	NA	2	-3	intron_retention	FALSE	canonical	3	33	junction_3	170.458857857907	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115500262_115500364_115500475_115502728_115502861_115503628
ES.6784.8	chr11	-	1185	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	168.619809037966	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503744	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499325_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503628
ES.6784.9	chr11	-	1210	6	NNC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	138.613707835841	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCGTATTTCCATAGC	NA	False	NA	-3	True	AATAAA	-15	NA	115503751	115498746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115499325_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ES.6785.1	chr11	+	172	1	Intergenic	novelGene_5521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAACAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	115559695	115559867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115559700_115559900
ES.6786.1	chr11	+	3031	1	Intergenic	novelGene_5523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATTTGTATGACAGT	9547	False	NA	NA	False	NA	NA	NA	115574010	115577041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115574000_115577000
ES.6787.1	chr11	+	198	1	Intergenic	novelGene_5524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATCCTGAATCTGAGGC	1035	False	NA	NA	False	AATAAA	-26	NA	115582805	115583003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115582800_115583000
ES.6788.1	chr11	-	2836	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-127	0	-127	0	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	4343	False	NA	-1	True	AATAAA	-19	NA	115599550	115534870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ES.6788.10	chr11	-	2574	6	NNC	ENSMUSG00000059923.14	novel	2709	6	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_5	361.093118184216	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGTCTTCATTTC	4516	False	NA	-4	True	AATAAA	-16	NA	115599377	115534873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590163_115599285
ES.6788.11	chr11	-	5640	2	ISM	ENSMUSG00000059923.14	ENSMUST00000106499.8	2333	4	48784	84	48784	-84	3prime_fragment	FALSE	canonical	3	878	junction_1	0	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATGTACTTACTCTGA	NA	False	NA	-85	True	TTTAAA	-33	NA	115541349	115534954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115536781_115537535
ES.6788.12	chr11	-	2653	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-45	101	-45	-101	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	4425	False	NA	-102	True	TTTAAA	-16	NA	115599468	115534971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ES.6788.15	chr11	-	2528	6	NNC	ENSMUSG00000059923.14	novel	2709	6	NA	NA	36	-105	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	349.995771403027	727	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	4527	False	NA	-106	True	TTTAAA	-12	NA	115599366	115534975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589996_115590183_115599219
ES.6788.16	chr11	-	1366	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	-37	1380	-37	-775	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTGGTATTTTCTCT	4433	False	NA	NA	False	AATAAA	-14	NA	115599460	115536250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ES.6788.17	chr11	-	1117	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	84	1508	63	-903	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGAATCTCGCCGCTACCC	4554	False	NA	NA	False	AATGAA	-15	NA	115599339	115536378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ES.6788.18	chr11	-	181	1	Intergenic	novelGene_5520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	669	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115537280	115537099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115537100_115537300
ES.6788.19	chr11	-	1396	1	FSM	ENSMUSG00000084277.2	ENSMUST00000118223.2	69	1	-1024	-303	-1024	303	mono-exon	FALSE	NA	NA	NA	NA	NA	554	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	115549409	115548013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115548000_115549400
ES.6788.20	chr11	-	176	1	Intergenic	novelGene_5522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	579	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	115571440	115571264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115571300_115571400
ES.6788.3	chr11	-	2581	5	NIC	ENSMUSG00000059923.14	novel	2709	6	NA	NA	7	-2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	380.736785719478	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTCTTCATTTCT	4498	False	NA	-3	True	AATAAA	-17	NA	115599395	115534872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115536781_115537535_115537705_115540596_115540720_115589977_115590183_115599219
ES.6788.4	chr11	-	2462	5	NIC	ENSMUSG00000059923.14	novel	2709	6	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	378.403884758072	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTCTTCATTTCT	4510	False	NA	-3	True	AATAAA	-17	NA	115599383	115534872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115599219
ES.6788.6	chr11	-	2536	5	NIC	ENSMUSG00000059923.14	novel	2709	6	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	398.477414667381	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTCTTCATTTCT	4518	False	NA	-3	True	AATAAA	-17	NA	115599375	115534872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115536781_115537535_115537705_115546183_115546282_115589977_115590183_115599219
ES.6788.7	chr11	-	3823	3	ISM	ENSMUSG00000059923.14	ENSMUST00000106497.8	2683	5	48018	2	47791	-2	3prime_fragment	FALSE	canonical	3	878	junction_1	10.5	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTCTTCATTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	115542342	115534872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115536781_115537535_115537705_115540596
ES.6789.1	chr11	+	156	1	Intergenic	novelGene_5525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTCTGAGACAGGGT	NA	False	NA	NA	False	AATAAA	-10	NA	115601696	115601852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115601700_115601900
ES.679.1	chr1	-	4251	5	NIC	ENSMUSG00000025997.14	novel	2013	9	NA	NA	7	10861	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69726397	69606187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_69609820_69616939_69617207_69722368_69722474_69723282_69723332_69726199
ES.679.2	chr1	-	1653	6	NNC	ENSMUSG00000025997.14	novel	361	4	NA	NA	10	10829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.01980390271856	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69726394	69606219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_69607089_69609651_69609820_69616939_69617207_69722368_69722474_69723282_69723332_69726199
ES.679.3	chr1	-	1290	6	NNC	ENSMUSG00000025997.14	novel	361	4	NA	NA	-24	10432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.01980390271856	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTGAACCTCACCTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	69726428	69606616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_69607089_69609651_69609820_69616939_69617207_69722368_69722474_69723282_69723332_69726199
ES.6790.1	chr11	+	167	1	Intergenic	novelGene_5526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATCAGGCTGGG	3338	False	NA	NA	False	NA	NA	NA	115616830	115616997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115616800_115617000
ES.6791.1	chr11	+	175	1	Intergenic	novelGene_5527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAAAAAAGGTAC	7379	False	NA	NA	False	NA	NA	NA	115620871	115621046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115620900_115621000
ES.6792.1	chr11	-	163	1	Intergenic	novelGene_5528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGCTTTGTCC	6839	False	NA	NA	False	NA	NA	NA	115621440	115621277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115621300_115621400
ES.6793.1	chr11	-	208	1	Intergenic	novelGene_5529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTAGCTGAGGCTC	4991	False	NA	NA	False	NA	NA	NA	115623288	115623080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115623100_115623300
ES.6794.1	chr11	+	175	1	Intergenic	novelGene_5530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGTTTTTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	115628317	115628492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115628300_115628500
ES.6795.1	chr11	-	178	1	Intergenic	novelGene_5531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	115633295	115633117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115633100_115633300
ES.6796.1	chr11	-	163	1	Intergenic	novelGene_5532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATCAA	3209	False	NA	NA	False	NA	NA	NA	115642018	115641855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115641900_115642000
ES.6797.1	chr11	-	179	1	Intergenic	novelGene_5533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGTGAGCAA	9383	False	NA	NA	False	NA	NA	NA	115654425	115654246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115654200_115654400
ES.6798.1	chr11	+	5036	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	-40	333	-40	0	multi-exon	TRUE	canonical	3	50	junction_13	18.7440729445739	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656218	115689859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.10	chr11	+	4913	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	27.0583060275037	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656261	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683692_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.12	chr11	+	4697	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	3	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	32.0470193061693	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656261	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656314_115668124_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682683_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.13	chr11	+	7674	26	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	3	-2	intron_retention	FALSE	canonical	2	14	junction_13	28.0327237349495	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656261	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684916_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.14	chr11	+	4879	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	3	-2	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	25.5130498529511	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656261	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656319_115668124_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.16	chr11	+	2368	15	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.493714304647	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656262	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678321_115686543_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.17	chr11	+	5471	31	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1	-1	intron_retention	FALSE	canonical	2	14	junction_17	25.0896171530952	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGGTGGATCCATGA	NA	False	NA	14	True	ATTAAA	-22	NA	115656269	115689858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684916_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.18	chr11	+	4956	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	26.1556614603952	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656269	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687236_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.19	chr11	+	4800	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	26.4315817151888	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656269	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656314_115668124_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.2	chr11	+	4901	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_26	26.3685951384096	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656249	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687591_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.20	chr11	+	5339	35	NNC	ENSMUSG00000020747.19	novel	5238	34	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0307765552838	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656269	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115666588_115666716_115666896_115667037_115667158_115667248_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.21	chr11	+	4759	33	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	26.9877721153488	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656269	115689859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100_115689577_115689736
ES.6798.22	chr11	+	4803	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.9684743251282	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656271	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656319_115668115_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.23	chr11	+	4937	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	27.395397503421	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656277	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682538_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.24	chr11	+	4918	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.6635538934165	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656277	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115681955_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.25	chr11	+	4938	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_26	25.3465881675971	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAACATCCTGTGGTGG	NA	False	NA	6	True	ATTAAA	-14	NA	115656277	115689850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687591_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.26	chr11	+	4771	31	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	27.786267591504	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656277	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115677005_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.27	chr11	+	2775	17	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	1574	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	29.0752660134005	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGACATTAGATACAAAC	NA	False	NA	NA	False	NA	NA	NA	115656277	115684378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656380_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882
ES.6798.3	chr11	+	6979	27	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-1	-8	intron_retention	TRUE	canonical	0	0	junction_22	28.2395972363454	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656257	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682889_115683142_115683317_115683686_115683790_115683882_115685231_115685488_115685605_115685806_115685907_115686142_115686641_115686891_115686970_115687215_115687302_115687461_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.30	chr11	+	4295	28	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	34.3870489545478	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656277	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685003_115686584_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.31	chr11	+	4317	28	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	27.7368587502863	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656277	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668143_115679073_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.32	chr11	+	4031	26	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8213155691818	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGTGGTGGATCCAT	NA	False	NA	12	True	ATTAAA	-20	NA	115656277	115689856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115679561_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.33	chr11	+	4861	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.6635538934165	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656277	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682683_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.36	chr11	+	5239	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	20.1870029585754	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCTCTGCTTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	115656283	115690193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.37	chr11	+	4666	31	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	26.5991854511875	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656283	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678289_115679537_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.38	chr11	+	4885	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_18	24.6996105156618	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656284	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684916_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.39	chr11	+	5095	33	NNC	ENSMUSG00000020747.19	novel	5238	34	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9803207445872	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656284	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115666588_115666716_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.4	chr11	+	4859	31	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-1	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	25.7846853771769	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656257	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656380_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.41	chr11	+	4850	32	NNC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	42	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	30.3867200853304	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115656321	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681861_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688799_115689100
ES.6798.43	chr11	+	5247	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	75	7	54	-7	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATGCATTTCTCTC	NA	False	NA	NA	False	AATAAA	-9	NA	115656333	115690185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.47	chr11	+	4877	32	NNC	ENSMUSG00000020747.19	novel	898	7	NA	NA	3464	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	26.5549907516259	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115661010	115689859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115661079_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.48	chr11	+	4910	32	NNC	ENSMUSG00000020747.19	novel	5238	34	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.9684743251282	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGTGGTGGATCCAT	NA	False	NA	12	True	ATTAAA	-20	NA	115666608	115689856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115666716_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.49	chr11	+	5028	32	NIC	ENSMUSG00000020747.19	novel	5238	34	NA	NA	234	-2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	26.4315817151888	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115666815	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115667037_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.5	chr11	+	4930	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	20.1870029585754	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGGTGGATCCATGA	NA	False	NA	14	True	ATTAAA	-22	NA	115656257	115689858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.50	chr11	+	5376	30	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	1487	-8	intron_retention	FALSE	canonical	3	36	junction_12	19.5995583439283	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115668068	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.51	chr11	+	5087	31	FSM	ENSMUSG00000020747.19	ENSMUST00000239299.2	5014	31	-75	2	-75	-2	multi-exon	FALSE	canonical	2	2	junction_1	25.7846853771769	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115671449	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115671794_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.52	chr11	+	5013	31	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	26.8532845083965	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGTGGTGGATCCATGA	NA	False	NA	14	True	ATTAAA	-22	NA	115671458	115689858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115671794_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.54	chr11	+	4960	31	NNC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	16	-8	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	30.8319639335544	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115671540	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115671794_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687591_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.56	chr11	+	4680	30	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	-3517	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_11	19.5406220379852	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115676262	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.57	chr11	+	4085	26	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	-717	-8	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	19.7393414277174	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115679062	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.60	chr11	+	4976	21	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	358	-8	intron_retention	FALSE	canonical	3	36	junction_4	20.6504237244663	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115680137	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682889_115683142_115683317_115683686_115683790_115683882_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.61	chr11	+	3567	21	NNC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	968	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.6396002141854	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115680747	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115680856_115680995_115681161_115681861_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.62	chr11	+	4967	17	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	1279	-8	intron_retention	FALSE	canonical	3	50	junction_1	19.7195176158039	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115681058	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115681161_115681792_115682889_115683142_115683317_115683686_115683790_115683882_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.63	chr11	+	3150	18	NNC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	2763	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	37.7824770354493	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115682542	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684836_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687591_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6798.64	chr11	+	1593	9	NIC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	6403	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	40.4907396820557	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAACATCCTGTGGTGG	NA	False	NA	6	True	ATTAAA	-14	NA	115686182	115689850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115689100
ES.6798.65	chr11	+	1340	10	NNC	ENSMUSG00000020747.19	novel	5014	31	NA	NA	6783	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.1629397379607	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATCCTGTGGTGGA	NA	False	NA	7	True	ATTAAA	-15	NA	115686562	115689851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100_115689237_115689480
ES.6798.8	chr11	+	5142	34	NNC	ENSMUSG00000020747.19	novel	5238	34	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.4792454754062	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTGGTGGATCCATG	NA	False	NA	13	True	ATTAAA	-21	NA	115656260	115689857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115656380_115666588_115666716_115667158_115667248_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ES.6799.1	chr11	+	1919	11	NNC	ENSMUSG00000020781.15	novel	858	7	NA	NA	-952	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.4547966666064	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	4980	False	NA	NA	False	ATTAAA	-16	NA	115704597	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115704639_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.6799.10	chr11	+	2520	9	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-6	0	intron_retention	FALSE	canonical	3	180	junction_1	21.3819433167334	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5948	False	NA	NA	False	ATTAAA	-16	NA	115705565	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824
ES.6799.11	chr11	+	2263	8	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	5	-2	intron_retention	FALSE	canonical	2	6	junction_7	78.0143890443243	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGTGGTTCAATACTT	5959	False	NA	NA	False	ATTAAA	-14	NA	115705576	115713913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115705646_115705740_115706237_115706523_115706623_115707878_115707932_115710950_115711834_115712481_115712543_115712824_115712922_115713408
ES.6799.12	chr11	+	2694	9	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	29	5	7	0	intron_retention	FALSE	canonical	3	156	junction_1	23.9161948269368	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5961	False	NA	NA	False	ATTAAA	-16	NA	115705578	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481
ES.6799.13	chr11	+	2030	11	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	63.0673449575928	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5961	False	NA	NA	False	ATTAAA	-16	NA	115705578	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712396_115712543_115712824_115712942_115713408
ES.6799.14	chr11	+	4042	7	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	7	-9	intron_retention	FALSE	non_canonical	0	0	junction_2	83.4818676253845	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCTGCTGTGGTTC	5961	False	NA	NA	False	ATTAAA	-7	NA	115705578	115713906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115705906_115706000_115706838_115706924_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824
ES.6799.15	chr11	+	3241	7	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	7	-9	intron_retention	FALSE	canonical	3	187	junction_5	19.2613602842582	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTTCTGCTGTGGTTC	5961	False	NA	NA	False	ATTAAA	-7	NA	115705578	115713906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115712543_115712824
ES.6799.16	chr11	+	2038	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	8	-1	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTGGTTCAATACTTA	5962	False	NA	NA	False	ATTAAA	-15	NA	115705579	115713914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115705646_115705740_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.6799.17	chr11	+	3277	7	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-5	-18	intron_retention	FALSE	canonical	0	0	junction_3	82.7131925524715	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATATATTTTCTG	5974	False	NA	NA	False	CATAAA	-13	NA	115705591	115713897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115705906_115706000_115706065_115706152_115706235_115706523_115706623_115707878_115707932_115710950_115712543_115712824
ES.6799.18	chr11	+	1562	7	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	82.12930184911	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	6979	False	NA	NA	False	ATTAAA	-16	NA	115706596	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115706623_115707878_115707932_115710950_115711120_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.6799.19	chr11	+	1881	1	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	363	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	3960	False	NA	NA	False	ATTAAA	-16	NA	115712034	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115712000_115713900
ES.6799.2	chr11	+	1971	12	NNC	ENSMUSG00000020781.15	novel	858	7	NA	NA	-947	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	95.2823555162616	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	4985	False	NA	NA	False	ATTAAA	-16	NA	115704602	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115704639_115704877_115704939_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712938_115713408
ES.6799.3	chr11	+	2996	10	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-947	0	intron_retention	FALSE	canonical	3	8	junction_9	67.5805874676237	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	4985	False	NA	NA	False	ATTAAA	-16	NA	115704602	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713428
ES.6799.4	chr11	+	2965	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	-896	0	intron_retention	FALSE	canonical	3	180	junction_1	22.7063922038174	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5036	False	NA	NA	False	ATTAAA	-16	NA	115704653	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.6799.6	chr11	+	5411	6	NNC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	0	0	intron_retention	TRUE	non_canonical	0	0	junction_3	91.0375746601369	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5932	False	NA	NA	False	ATTAAA	-16	NA	115705549	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115706065_115706152_115706237_115706523_115708877_115710526_115711834_115712481_115712543_115712824
ES.6799.7	chr11	+	1974	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	5	0	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5932	False	NA	NA	False	ATTAAA	-16	NA	115705549	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.6799.8	chr11	+	2441	10	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	5	0	0	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5932	False	NA	NA	False	ATTAAA	-16	NA	115705549	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824
ES.6799.9	chr11	+	1873	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	68.207381664892	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5934	False	NA	NA	False	ATTAAA	-16	NA	115705551	115713915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ES.68.1	chr1	+	468	4	NNC	ENSMUSG00000097893.9	novel	264	4	NA	NA	1	163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.05480466765633	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTTTAGAAATAATTTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	9818812	9841139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9818874_9820582_9820631_9822673_9822790_9840896
ES.68.2	chr1	+	2436	6	NNC	ENSMUSG00000097893.9	novel	1996	4	NA	NA	27	1348	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.16619037896906	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACGTATTTTATTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	9818877	9842829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9819241_9820582_9820631_9822033_9822174_9822673_9822790_9840896_9841021_9841184
ES.68.3	chr1	+	178	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAAGCCGGGCGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	9833780	9833958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9833800_9834000
ES.680.1	chr1	+	3583	11	FSM	ENSMUSG00000053153.15	ENSMUST00000113940.4	3559	11	-22	-2	0	2	multi-exon	FALSE	canonical	1	2	junction_8	1.81383571472171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAACATCTCTTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	69866128	69965403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_69866281_69882127_69882175_69883437_69883534_69892481_69892601_69897631_69897770_69909422_69909531_69912292_69912411_69926650_69926718_69934385_69934431_69935630_69935741_69962820
ES.680.2	chr1	+	2356	5	ISM	ENSMUSG00000053153.15	ENSMUST00000113940.4	3559	11	-15	65821	6	-13339	5prime_fragment	FALSE	canonical	2	3	junction_3	2.34520787991171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAAATGTTTCTTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	69866135	69899580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_69866281_69882127_69882175_69883437_69883534_69892481_69892601_69897631
ES.6800.1	chr11	-	5242	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-63	-250	-54	250	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTCCCAGAACAAGGGCA	4057	False	NA	NA	False	NA	NA	NA	115704519	115689758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.10	chr11	-	4458	18	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	-25	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	15.2941176470588	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGTGTTTGCATCT	4086	False	NA	-2	True	AATGAA	-17	NA	115704490	115690009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694442_115695978_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.12	chr11	-	4799	19	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.0869811988869	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTGTGTTTGCAT	4113	False	NA	-4	True	AATGAA	-15	NA	115704463	115690011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693188_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115702712_115703209_115704339
ES.6800.13	chr11	-	4935	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.4898474343369	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTGTGTTTGCAT	4103	False	NA	-4	True	AATGAA	-15	NA	115704473	115690011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692960_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.14	chr11	-	4844	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.4898474343369	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTGTGTTTGCAT	4120	False	NA	-4	True	AATGAA	-15	NA	115704456	115690011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693188_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.16	chr11	-	4837	19	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	32	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	17.4086681970523	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGGGCTGTGTTTGCA	4152	False	NA	-5	True	AATGAA	-14	NA	115704424	115690012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697452_115697544_115697691_115698089_115698188_115702712_115703209_115704339
ES.6800.17	chr11	-	4972	19	NIC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	42	-4	intron_retention	FALSE	canonical	3	37	junction_9	9.040375825248	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGGGCTGTGTTTGCA	4162	False	NA	-5	True	AATGAA	-14	NA	115704414	115690012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.19	chr11	-	5178	19	NIC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	3	-156	intron_retention	FALSE	canonical	3	37	junction_9	9.22891323538004	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGCCTGAGAGGATGC	4114	False	NA	NA	False	TTTAAA	-19	NA	115704462	115690164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.2	chr11	-	5146	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	1	199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.3685174471415	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGGCTCATTTTCCA	4121	False	NA	NA	False	TATAAA	-18	NA	115704455	115689809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697710_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.20	chr11	-	4970	19	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	1	-158	intron_retention	FALSE	canonical	0	0	junction_3	14.8665877759076	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACTGCCTGAGAGGAT	4112	False	NA	NA	False	TTTAAA	-17	NA	115704464	115690166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693188_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.21	chr11	-	4704	19	NIC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	4	-169	combination_of_known_splicesites	FALSE	canonical	2	2	junction_17	14.2526800598655	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTATCTATTAACTG	4124	False	NA	NA	False	TTTAAA	-6	NA	115704452	115690177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115702712_115703209_115704339
ES.6800.22	chr11	-	4845	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-85	169	-76	-169	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTATCTATTAACTG	4035	False	NA	NA	False	TTTAAA	-6	NA	115704541	115690177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.24	chr11	-	4694	21	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	2	-171	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.1876707038189	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATTCTATCTATTAAC	4113	False	NA	NA	False	TTTAAA	-4	NA	115704463	115690179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690548_115690618_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.25	chr11	-	2633	7	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	29	-172	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	23.1708629293104	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATTCTATCTATTAA	4149	False	NA	NA	False	TTTAAA	-3	NA	115704427	115690180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692493_115698137_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.26	chr11	-	4818	19	NIC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	22	-172	intron_retention	FALSE	canonical	3	37	junction_8	8.90987106916457	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATTCTATCTATTAA	4142	False	NA	NA	False	TTTAAA	-3	NA	115704434	115690180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115690904_115691185_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.27	chr11	-	3620	14	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	24	-172	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	17.0210451010319	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATTCTATCTATTAA	4144	False	NA	NA	False	TTTAAA	-3	NA	115704432	115690180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692488_115694416_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.28	chr11	-	4986	19	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	2	-174	intron_retention	FALSE	canonical	0	0	junction_15	14.7037620112661	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTTATTCTATCTATT	4113	False	NA	NA	False	TTTAAA	-1	NA	115704463	115690182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697756_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.29	chr11	-	4755	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	4	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.3685174471415	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATATATTTTAAATGGAA	4124	False	NA	NA	False	NA	NA	NA	115704452	115690197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697710_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.30	chr11	-	4630	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-28	327	-19	-327	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCGGTGGCCTTTTCTGC	4092	False	NA	NA	False	AATACA	-19	NA	115704484	115690335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.5	chr11	-	5047	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	2	193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.4898474343369	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCCCCAAAGGCTCAT	4113	False	NA	NA	False	TATAAA	-12	NA	115704463	115689815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693188_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.6	chr11	-	5085	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	-155	-1	-146	1	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTGTTTGCATCTGT	3965	False	NA	0	True	AATGAA	-19	NA	115704611	115690007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6800.7	chr11	-	4956	20	NNC	ENSMUSG00000034471.13	novel	4929	20	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	14.3685174471415	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGTTTGCATCTG	4112	False	NA	-1	True	AATGAA	-18	NA	115704464	115690008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697710_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ES.6801.1	chr11	-	163	1	Intergenic	novelGene_5534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	112	False	NA	NA	False	NA	NA	NA	115708464	115708301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115708300_115708500
ES.6802.1	chr11	+	3701	26	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-92	-20	combination_of_known_junctions	TRUE	canonical	3	18	junction_22	175.249006844547	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCGTCTTCACTTT	6708	False	NA	18	True	AATAAA	-3	NA	115714782	115746584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.100	chr11	+	3488	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-3584	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.154980778444	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115719209	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115719297_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.102	chr11	+	3622	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-3560	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.476308278035	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115719233	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115719464_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.103	chr11	+	4003	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1224	-22	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	209.549573296247	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115721569	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721918_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.104	chr11	+	3916	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1170	-22	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	242.73070828711	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115721623	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721918_115723523_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.106	chr11	+	3687	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1143	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	169.618744247209	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCTGAGGACCCGTGC	NA	False	NA	38	True	AATAAA	-23	NA	115721650	115746604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721918_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.107	chr11	+	3788	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1096	-28	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	255.30058832678	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115721697	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721918_115723523_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.108	chr11	+	3437	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1082	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.154980778444	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTAAAACTGAGTTTTT	NA	False	NA	-10	True	TATAAA	-12	NA	115721711	115746556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721774_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.11	chr11	+	3770	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-22	-22	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	210.355967674071	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6778	False	NA	16	True	AATAAA	-1	NA	115714852	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115723523_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.111	chr11	+	4940	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-914	-28	intron_retention	FALSE	canonical	0	0	junction_2	227.161582613312	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115721879	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115721918_115723523_115723745_115724333_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.112	chr11	+	3500	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-824	-27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	219.154980778444	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACACCTTGTTTCGTCT	NA	False	NA	11	True	AGTAAA	-13	NA	115721969	115746577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115722074_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.113	chr11	+	3525	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-161	-23	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	177.476308278035	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGTTTCGTCTTCAC	NA	False	NA	15	True	AGTAAA	-17	NA	115722632	115746581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115722761_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.114	chr11	+	3772	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	56	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.760376709031	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115722849	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115723009_115723523_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.115	chr11	+	3446	26	NIC	ENSMUSG00000020782.19	novel	791	6	NA	NA	161	-28	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	177.476308278035	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115722954	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115723009_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.116	chr11	+	3631	26	NIC	ENSMUSG00000020782.19	novel	791	6	NA	NA	691	-49	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	153.140719601287	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGTAAAACTGAGTTTT	NA	False	NA	-11	True	TATAAA	-11	NA	115723484	115746555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.118	chr11	+	3791	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-42	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.656740985143	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACACCTTGTTTCGT	NA	False	NA	9	True	AGTAAA	-11	NA	115724708	115746575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115724879_115725081_115725312_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.119	chr11	+	3531	26	NIC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-4	-21	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	177.476308278035	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTTTCGTCTTCACTT	NA	False	NA	17	True	AATAAA	-2	NA	115724746	115746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115724879_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.12	chr11	+	6149	19	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-15	-28	intron_retention	FALSE	canonical	3	658	junction_12	87.4982363137949	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6785	False	NA	10	True	AGTAAA	-12	NA	115714859	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.120	chr11	+	3538	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-135	-28	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	174.901801019887	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115725004	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115725151_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.121	chr11	+	3419	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	54	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	294.419955845388	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115725202	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115725312_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741623_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.123	chr11	+	3586	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	485	-34	intron_retention	FALSE	canonical	3	630	junction_6	88.6375129144099	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTAATAAACACCTTGT	NA	False	NA	4	True	AGTAAA	-6	NA	115725633	115746570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.124	chr11	+	3398	23	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	505	-28	intron_retention	FALSE	canonical	3	54	junction_20	226.281789693973	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115725653	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746294
ES.6802.125	chr11	+	3429	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2076	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	236.447312518502	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115727224	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727366_115734142_115734241_115735319_115735402_115735660_115735777_115736203_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.126	chr11	+	3409	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2307	-28	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	180.272633037359	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115727455	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727579_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.127	chr11	+	3583	24	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2371	-1	intron_retention	FALSE	canonical	1	4	junction_1	184.0143517868	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAACCTGAGGACCCGTG	NA	False	NA	37	True	AATAAA	-22	NA	115727519	115746603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727579_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.128	chr11	+	3475	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2531	-28	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	174.17459611136	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115727679	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.129	chr11	+	3861	23	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2592	-28	intron_retention	FALSE	canonical	3	39	junction_1	181.762377799893	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115727740	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.13	chr11	+	3828	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-14	6	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	202.96016457021	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCCGTGCTTCTCTGT	6786	False	NA	46	True	AATAAA	-31	NA	115714860	115746612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.130	chr11	+	3394	24	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2592	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	229.199106943763	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACCTGAGGACCCGTGC	NA	False	NA	38	True	AATAAA	-23	NA	115727740	115746604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.131	chr11	+	3496	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2596	-25	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	260.652463247947	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTTGTTTCGTCTTC	NA	False	NA	13	True	AGTAAA	-15	NA	115727744	115746579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.132	chr11	+	3407	24	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	8882	-22	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_21	166.028979181847	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	3334	False	NA	16	True	AATAAA	-1	NA	115734030	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.133	chr11	+	3369	22	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	20529	24	-8674	-22	3prime_fragment	FALSE	canonical	3	630	junction_3	87.8283731447401	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	4707	False	NA	16	True	AATAAA	-1	NA	115735403	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.134	chr11	+	3071	22	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-8370	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	233.226331150559	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	5011	False	NA	10	True	AGTAAA	-12	NA	115735707	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743847_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.135	chr11	+	2859	20	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	22871	3	-6332	-1	3prime_fragment	FALSE	canonical	3	630	junction_1	91.2303103638581	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAACCTGAGGACCCGTG	7049	False	NA	37	True	AATAAA	-22	NA	115737745	115746603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.138	chr11	+	2939	9	NIC	ENSMUSG00000020782.19	novel	3612	26	NA	NA	-6276	-2838	intron_retention	FALSE	canonical	3	630	junction_1	53.793586978375	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATACAAAAAA	7105	False	NA	NA	False	NA	NA	NA	115737801	115742308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115737910_115737996_115738130_115738414_115738470_115739011_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833
ES.6802.139	chr11	+	2975	16	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5664	-28	intron_retention	FALSE	canonical	3	655	junction_2	91.6469069612039	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	7717	False	NA	10	True	AGTAAA	-12	NA	115738413	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745932_115746017_115746080_115746291
ES.6802.14	chr11	+	3610	26	NNC	ENSMUSG00000020782.19	novel	3612	26	NA	NA	-14	-28	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_16	219.068332718355	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6786	False	NA	10	True	AGTAAA	-12	NA	115714860	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115742057_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.140	chr11	+	2466	17	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5067	-46	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_14	189.046579908233	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAACTGAGTTTTTAA	8314	False	NA	-8	True	TATAAA	-14	NA	115739010	115746558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.141	chr11	+	2329	16	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-3737	-28	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_13	193.457959831645	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	9644	False	NA	10	True	AGTAAA	-12	NA	115740340	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.143	chr11	+	2587	3	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-411	-28	intron_retention	FALSE	canonical	3	765	junction_2	98.5	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115743666	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115743974_115744093_115745686_115745888
ES.6802.144	chr11	+	2342	4	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-261	-28	intron_retention	FALSE	canonical	3	906	junction_3	31.5101394615906	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	NA	False	NA	10	True	AGTAAA	-12	NA	115743816	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115743974_115744093_115745932_115746017_115746080_115746291
ES.6802.15	chr11	+	3769	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-12	-28	intron_retention	FALSE	canonical	3	630	junction_7	90.034368437836	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6788	False	NA	10	True	AGTAAA	-12	NA	115714862	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.17	chr11	+	3762	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-21	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	220.243692358416	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTTTCGTCTTCACTT	6794	False	NA	17	True	AATAAA	-2	NA	115714868	115746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.18	chr11	+	3712	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-23	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	260.887151082609	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGTTTCGTCTTCAC	6794	False	NA	15	True	AGTAAA	-17	NA	115714868	115746581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.19	chr11	+	3511	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-6	-22	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_9	176.212716907719	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6794	False	NA	16	True	AATAAA	-1	NA	115714868	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739033_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.2	chr11	+	3648	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-92	-5	-92	5	multi-exon	FALSE	canonical	3	630	junction_7	88.2626444199357	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGACCCGTGCTTCTCTG	6708	False	NA	45	True	AATAAA	-30	NA	115714782	115746611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.21	chr11	+	4144	23	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-48	intron_retention	FALSE	canonical	3	630	junction_7	92.5842591444265	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTAAAACTGAGTTTTT	6795	False	NA	-10	True	TATAAA	-12	NA	115714869	115746556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.22	chr11	+	3508	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-28	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	177.993932480857	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6795	False	NA	10	True	AGTAAA	-12	NA	115714869	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741851_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.23	chr11	+	3745	25	ISM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	-5	23	-5	-21	intron_retention	FALSE	canonical	3	630	junction_7	86.7898163508958	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTTTCGTCTTCACTT	6795	False	NA	17	True	AATAAA	-2	NA	115714869	115746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017
ES.6802.24	chr11	+	3553	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	176.361329094561	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTTAACAACCTGAGGA	6795	False	NA	31	True	AATAAA	-16	NA	115714869	115746597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737990_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.25	chr11	+	3933	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	280.948899310299	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6795	False	NA	16	True	AATAAA	-1	NA	115714869	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115723523_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.26	chr11	+	3582	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-24	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_21	176.503343877673	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTTGTTTCGTCTTCA	6795	False	NA	14	True	AGTAAA	-16	NA	115714869	115746580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745234_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.28	chr11	+	3732	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-5	-22	intron_retention	FALSE	canonical	1	9	junction_6	179.42702013787	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6795	False	NA	16	True	AATAAA	-1	NA	115714869	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736348_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.3	chr11	+	3557	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-57	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	172.677761668954	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAACCTGAGGACCCGTG	6743	False	NA	37	True	AATAAA	-22	NA	115714817	115746603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.30	chr11	+	5673	22	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-2	-22	intron_retention	FALSE	canonical	3	630	junction_7	89.6602809854763	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6798	False	NA	16	True	AATAAA	-1	NA	115714872	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.31	chr11	+	4039	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-1	-28	intron_retention	FALSE	canonical	3	11	junction_2	287.084238508491	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6799	False	NA	10	True	AGTAAA	-12	NA	115714873	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.33	chr11	+	3383	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	221.41369885729	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAACAACCTGAGGACC	6799	False	NA	33	True	AATAAA	-18	NA	115714873	115746599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
ES.6802.41	chr11	+	3956	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-1	-21	intron_retention	FALSE	canonical	3	630	junction_7	90.563390993711	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTTTCGTCTTCACTT	6799	False	NA	17	True	AATAAA	-2	NA	115714873	115746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.42	chr11	+	3458	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-1	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	174.873208506204	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6799	False	NA	16	True	AATAAA	-1	NA	115714873	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744577_115744646_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.44	chr11	+	3465	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	178.147507420115	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6804	False	NA	16	True	AATAAA	-1	NA	115714878	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725671_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.45	chr11	+	2693	20	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-2	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	195.938355957123	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6807	False	NA	10	True	AGTAAA	-12	NA	115714881	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734170_115739053_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.46	chr11	+	3505	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	-27	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_6	217.161889842578	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACACCTTGTTTCGTCT	6809	False	NA	11	True	AGTAAA	-13	NA	115714883	115746577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736348_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.47	chr11	+	3506	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	178.331035997664	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6809	False	NA	10	True	AGTAAA	-12	NA	115714883	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742948_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.48	chr11	+	4229	21	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	1	-28	intron_retention	FALSE	canonical	1	8	junction_8	247.561603444476	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6810	False	NA	10	True	AGTAAA	-12	NA	115714884	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115738130_115738414_115738470_115740341_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.49	chr11	+	3461	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	1	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	219.449150374295	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTCAAGTAAAACTGAGT	6810	False	NA	-14	True	TATAAA	-8	NA	115714884	115746552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740947_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.50	chr11	+	5469	23	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	2	-22	intron_retention	FALSE	canonical	3	630	junction_7	88.9549983729818	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6811	False	NA	16	True	AATAAA	-1	NA	115714885	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.51	chr11	+	3498	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	3	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	178.33372760081	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTTGTTTCGTCTTC	6812	False	NA	13	True	AGTAAA	-15	NA	115714886	115746579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741155_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.52	chr11	+	3509	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	3	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	177.124290824268	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6812	False	NA	16	True	AATAAA	-1	NA	115714886	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743862_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.53	chr11	+	3531	25	NNC	ENSMUSG00000020782.19	novel	3612	26	NA	NA	4	-28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	274.46695497819	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6813	False	NA	10	True	AGTAAA	-12	NA	115714887	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740825_115740976_115741063_115741169_115741452_115741746_115741833_115742057_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.55	chr11	+	3485	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	176.121362630999	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6813	False	NA	10	True	AGTAAA	-12	NA	115714887	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745706_115746017_115746080_115746291
ES.6802.56	chr11	+	6138	19	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-31	intron_retention	FALSE	canonical	0	0	junction_14	198.053716681505	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATAAACACCTTGTTTC	6813	False	NA	7	True	AGTAAA	-9	NA	115714887	115746573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115738130_115738414_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744050_115744808_115745018_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.57	chr11	+	3955	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-28	intron_retention	FALSE	canonical	3	630	junction_7	91.9663577841548	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6813	False	NA	10	True	AGTAAA	-12	NA	115714887	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.58	chr11	+	3488	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	219.413268514008	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCGTCTTCACTTT	6813	False	NA	18	True	AATAAA	-3	NA	115714887	115746584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736230_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.59	chr11	+	3658	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-43	intron_retention	FALSE	canonical	3	630	junction_7	91.7098449032268	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTGAGTTTTTAATAA	6813	False	NA	-5	True	TATAAA	-17	NA	115714887	115746561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740705_115740821_115740976_115741063_115741169_115741452_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.6	chr11	+	3610	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	-47	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	173.500828816464	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACACCTTGTTTCGT	6753	False	NA	9	True	AGTAAA	-11	NA	115714827	115746575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744050_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.60	chr11	+	3502	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	177.506957610117	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6813	False	NA	16	True	AATAAA	-1	NA	115714887	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736355_115737754_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.61	chr11	+	3503	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	4	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	216.839715919386	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6813	False	NA	16	True	AATAAA	-1	NA	115714887	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734233_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
ES.6802.64	chr11	+	3724	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	9	-19	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_23	249.387518532905	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCGTCTTCACTTTA	6818	False	NA	19	True	AATAAA	-4	NA	115714892	115746585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.65	chr11	+	5220	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	9	-28	intron_retention	FALSE	canonical	3	630	junction_7	87.0867720156938	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6818	False	NA	10	True	AGTAAA	-12	NA	115714892	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.66	chr11	+	3228	21	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	9	-28	intron_retention	FALSE	canonical	0	0	junction_9	253.15832990443	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6818	False	NA	10	True	AGTAAA	-12	NA	115714892	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.68	chr11	+	3306	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	12	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	180.161887078137	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACCTTGTTTCGTCTTC	6821	False	NA	13	True	AGTAAA	-15	NA	115714895	115746579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738453_115740366_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.69	chr11	+	2520	16	ISM	ENSMUSG00000020782.19	ENSMUST00000177736.8	3612	26	13	4263	13	-2805	5prime_fragment	FALSE	canonical	3	630	junction_7	74.0742570368111	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAGAAAGTCTGGTGT	6822	False	NA	NA	False	NA	NA	NA	115714896	115742341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833
ES.6802.70	chr11	+	3757	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	13	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	250.764386626171	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6822	False	NA	16	True	AATAAA	-1	NA	115714896	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745206_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.71	chr11	+	3898	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	13	-23	intron_retention	FALSE	canonical	0	0	junction_12	182.010258982839	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGTTTCGTCTTCAC	6822	False	NA	15	True	AGTAAA	-17	NA	115714896	115746581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740947_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.72	chr11	+	3470	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	14	-28	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	181.948920640443	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6823	False	NA	10	True	AGTAAA	-12	NA	115714897	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740587_115740808_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.73	chr11	+	3933	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	279.926250325513	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6825	False	NA	10	True	AGTAAA	-12	NA	115714899	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
ES.6802.74	chr11	+	2750	17	NNC	ENSMUSG00000020782.19	novel	3612	26	NA	NA	16	-2800	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	255.078541825846	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAGTCTGGTGTTAGTC	6825	False	NA	NA	False	NA	NA	NA	115714899	115742346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833
ES.6802.75	chr11	+	3606	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-5	intron_retention	FALSE	canonical	3	655	junction_9	83.6752983595252	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAACAACCTGAGGACC	6825	False	NA	33	True	AATAAA	-18	NA	115714899	115746599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.76	chr11	+	3981	28	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-28	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	245.871390651171	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6825	False	NA	10	True	AGTAAA	-12	NA	115714899	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115715850_115716079_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.77	chr11	+	4835	24	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-47	intron_retention	FALSE	canonical	3	80	junction_23	165.893878211275	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTAAAACTGAGTTTTTA	6825	False	NA	-9	True	TATAAA	-13	NA	115714899	115746557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
ES.6802.78	chr11	+	3550	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	16	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.476308278035	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTTAACAACCTGAGGA	6825	False	NA	31	True	AATAAA	-16	NA	115714899	115746597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715037_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.80	chr11	+	5502	21	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	18	-28	intron_retention	FALSE	canonical	3	630	junction_7	92.0888701201182	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6827	False	NA	10	True	AGTAAA	-12	NA	115714901	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743974_115744093_115744808_115745018_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.82	chr11	+	771	6	ISM	ENSMUSG00000020782.19	ENSMUST00000177736.8	3612	26	19	10137	19	165	5prime_fragment	FALSE	canonical	3	674	junction_1	80.564508314766	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTGCGTCTCAGTCAA	6828	False	NA	NA	False	AGTAAA	-16	NA	115714902	115736467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199
ES.6802.84	chr11	+	3562	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	19	-29	intron_retention	FALSE	canonical	0	0	junction_19	264.708720289344	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACACCTTGTTTCGT	6828	False	NA	9	True	AGTAAA	-11	NA	115714902	115746575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115738130_115738414_115738470_115739033_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744810_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
ES.6802.86	chr11	+	3437	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	20	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	261.025528232181	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTCGTCTTCACTTT	6829	False	NA	18	True	AATAAA	-3	NA	115714903	115746584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740353_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746294
ES.6802.87	chr11	+	3780	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	20	-28	intron_retention	FALSE	canonical	3	18	junction_21	221.405449941705	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	6829	False	NA	10	True	AGTAAA	-12	NA	115714903	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115745182_115745372_115745402_115745557_115745686_115745888_115745932_115746017_115746080_115746294
ES.6802.88	chr11	+	3769	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	20	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	285.306118688238	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6829	False	NA	16	True	AATAAA	-1	NA	115714903	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115723253_115723313_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
ES.6802.89	chr11	+	3814	28	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	20	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	249.44322087192	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6829	False	NA	16	True	AATAAA	-1	NA	115714903	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115723253_115723313_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.91	chr11	+	3564	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	31	-22	intron_retention	FALSE	canonical	3	630	junction_7	90.0666419935816	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6840	False	NA	16	True	AATAAA	-1	NA	115714914	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.93	chr11	+	4427	23	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	35	-29	intron_retention	FALSE	canonical	3	630	junction_7	89.2929527172143	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACACCTTGTTTCGT	6844	False	NA	9	True	AGTAAA	-11	NA	115714918	115746575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.96	chr11	+	3388	24	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	38	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	179.826538978492	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTGTTTCGTCTTCAC	6847	False	NA	15	True	AGTAAA	-17	NA	115714921	115746581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115746017_115746080_115746291
ES.6802.97	chr11	+	3456	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	41	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	175.824667211401	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	6850	False	NA	16	True	AATAAA	-1	NA	115714924	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746059_115746291
ES.6802.98	chr11	+	3792	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	461	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	223.256201170195	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACACCTTGTTTCGTC	7270	False	NA	10	True	AGTAAA	-12	NA	115715344	115746576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115715517_115715850_115716079_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6802.99	chr11	+	3458	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-3585	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	272.809659653026	1131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTTTCGTCTTCACT	NA	False	NA	16	True	AATAAA	-1	NA	115719208	115746582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115719297_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740947_115741063_115741169_115741452_115741746_115741832_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ES.6803.1	chr11	+	170	1	Intergenic	novelGene_5535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAAAAGAAAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	115748293	115748463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115748300_115748500
ES.6804.1	chr11	+	7152	61	NNC	ENSMUSG00000034427.18	novel	9340	64	NA	NA	3473	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.22693345407547	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTGTCTCCACCGG	NA	False	NA	NA	False	AGTAAA	-23	NA	115752704	115783427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115752780_115753057_115753155_115753527_115753632_115753764_115753829_115753935_115754051_115754156_115754319_115755358_115755473_115755561_115755621_115755692_115755826_115757056_115757153_115757370_115757503_115760300_115760427_115761963_115762042_115762236_115762353_115762452_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115767920_115768570_115768622_115768923_115768982_115769137_115769269_115770383_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778390_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.10	chr11	+	3763	23	NIC	ENSMUSG00000034427.18	novel	5154	43	NA	NA	-2771	0	intron_retention	FALSE	canonical	2	5	junction_19	3.56086394939707	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGTGAGCATGTGT	7679	False	NA	NA	False	AGTAAA	-14	NA	115774490	115783418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777552_115777687_115777800_115777887_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.2	chr11	+	6475	54	ISM	ENSMUSG00000034427.18	ENSMUST00000093911.11	9340	64	6257	7	6257	-3	3prime_fragment	FALSE	canonical	0	0	junction_7	4.98841662883105	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGATTGTGTGTGAG	NA	False	NA	NA	False	AGTAAA	-7	NA	115755488	115783411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115755621_115755692_115755826_115757056_115757153_115757370_115757503_115760300_115760427_115761963_115762042_115762236_115762353_115762455_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115767920_115768570_115768622_115768923_115768982_115769137_115769269_115770383_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778390_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.3	chr11	+	4920	39	NNC	ENSMUSG00000034427.18	novel	9340	64	NA	NA	6266	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.96984827050842	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCACTCCTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	115755497	115778272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115755621_115755692_115755826_115757056_115757153_115757370_115757503_115760300_115760427_115761963_115762042_115762236_115762353_115762452_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115767920_115768570_115768622_115768923_115768982_115769137_115769269_115770383_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887
ES.6804.4	chr11	+	7646	54	NNC	ENSMUSG00000034427.18	novel	9340	64	NA	NA	6281	1	intron_retention	FALSE	non_canonical	0	0	junction_6	5.18033634588155	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTGAGCATGTGTC	NA	False	NA	NA	False	AGTAAA	-15	NA	115755512	115783419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115755621_115755692_115757153_115757370_115757503_115760300_115760427_115761963_115762042_115762236_115762341_115762455_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115767920_115768361_115768398_115768570_115768622_115768923_115768982_115769137_115769269_115770383_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778458_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.5	chr11	+	7191	50	NNC	ENSMUSG00000034427.18	novel	9340	64	NA	NA	6294	0	intron_retention	FALSE	canonical	0	0	junction_12	5.1198058063964	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGTGAGCATGTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	115755525	115783418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115755621_115757056_115757153_115760300_115760427_115761963_115762042_115762236_115762353_115762452_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115768622_115768923_115768982_115769137_115769269_115770386_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.6	chr11	+	8491	52	NIC	ENSMUSG00000034427.18	novel	9340	64	NA	NA	6304	-3	intron_retention	FALSE	canonical	0	0	junction_6	5.10037653810479	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGATTGTGTGTGAG	NA	False	NA	NA	False	AGTAAA	-7	NA	115755535	115783411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115755621_115755692_115757153_115757370_115757503_115760300_115760427_115761963_115762042_115762236_115762353_115762455_115762502_115762626_115762752_115764229_115764348_115764582_115764747_115767825_115768392_115768570_115768622_115768923_115768982_115769137_115769269_115770383_115770480_115770576_115770813_115770894_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.7	chr11	+	4725	37	NIC	ENSMUSG00000034427.18	novel	5154	43	NA	NA	-518	2	intron_retention	FALSE	canonical	1	2	junction_2	4.4647971488352	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTCCACCGGAGGA	3921	False	NA	NA	False	AGTAAA	-27	NA	115770732	115783431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115771074_115771261_115771335_115772007_115772170_115772329_115772431_115772526_115772604_115772722_115772805_115773034_115773134_115773232_115773337_115773636_115773829_115774028_115774111_115774242_115774345_115774432_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778390_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.8	chr11	+	3358	25	NIC	ENSMUSG00000034427.18	novel	5154	43	NA	NA	-2800	5	intron_retention	FALSE	canonical	1	5	junction_21	3.49180588425722	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGCATGTGTCTCCA	7650	False	NA	NA	False	AGTAAA	-19	NA	115774461	115783423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778031_115778390_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780964_115781062_115781158_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6804.9	chr11	+	3616	25	NNC	ENSMUSG00000034427.18	novel	5154	43	NA	NA	-2779	0	intron_retention	FALSE	canonical	0	0	junction_17	4.20296687538167	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTGTGAGCATGTGT	7671	False	NA	NA	False	AGTAAA	-14	NA	115774482	115783418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115774734_115774823_115774912_115775005_115775232_115775901_115776015_115776219_115776280_115776846_115776923_115777016_115777136_115777216_115777336_115777409_115777552_115777687_115777800_115777887_115778534_115778692_115778757_115778847_115778921_115779237_115779315_115780691_115780763_115780847_115780964_115781062_115781167_115781277_115781356_115781440_115781538_115781648_115781795_115781930_115782050_115782326_115782461_115782630_115782765_115782873_115783015_115783108
ES.6805.1	chr11	+	1515	4	FSM	ENSMUSG00000048442.16	ENSMUST00000142089.2	685	4	-461	-369	-249	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTTTGGCTGGGCTCT	9767	False	NA	NA	False	AGTAAA	-21	NA	115790542	115797091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115791169_115793812_115793970_115795980_115796129_115796507
ES.6806.1	chr11	+	178	1	Intergenic	novelGene_5536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	115813579	115813757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115813600_115813800
ES.6807.10	chr11	-	5133	15	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	1	-2	intron_retention	FALSE	canonical	3	54	junction_10	12.8255564385793	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTGGGTGTTTT	NA	False	NA	-4	True	AATAAA	-31	NA	115824302	115783422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786668_115786749_115786809_115786924_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.13	chr11	-	4025	18	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	27	-3	intron_retention	FALSE	canonical	3	14	junction_17	19.5812564851271	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTGGGTGTTT	NA	False	NA	-5	True	AATAAA	-30	NA	115824276	115783423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
ES.6807.14	chr11	-	4401	17	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-5	-3	intron_retention	FALSE	canonical	3	54	junction_12	12.7616368464237	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTGGGTGTTT	NA	False	NA	-5	True	AATAAA	-30	NA	115824308	115783423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.15	chr11	-	5477	14	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	1	-3	intron_retention	FALSE	canonical	3	54	junction_9	14.1182663166191	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTCTTGGGTGTTT	NA	False	NA	-5	True	AATAAA	-30	NA	115824302	115783423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785957_115786240_115786668_115786749_115786809_115786924_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.16	chr11	-	5210	21	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.7304557650905	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824324	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115795710_115795869_115803338_115804403_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.17	chr11	-	4051	20	NNC	ENSMUSG00000020752.12	novel	4410	19	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	24.8147708670783	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824310	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818229_115818322_115819313_115821502_115821625_115823614_115823745_115824106
ES.6807.18	chr11	-	4171	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	30.8980989832	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824318	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818780_115819313_115819566_115819743_115821502_115821625_115823614
ES.6807.19	chr11	-	4096	4	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2183	-4	intron_retention	FALSE	canonical	3	71	junction_1	5.55777733351102	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115788145	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115785957_115786240_115786335_115786593_115786668_115786749
ES.6807.2	chr11	-	4155	18	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-15	0	intron_retention	FALSE	canonical	3	54	junction_13	12.4283413141122	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824318	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.21	chr11	-	4242	22	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	32.2480465755138	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824304	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115819566_115819700_115819801_115819903_115820401_115820442_115821502_115821625_115823614
ES.6807.22	chr11	-	3967	6	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2382	-4	intron_retention	FALSE	canonical	3	71	junction_3	14.00856880627	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115788344	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784546_115784772_115785957_115786240_115786335_115786593_115786668_115786749
ES.6807.23	chr11	-	3543	18	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	33	-4	intron_retention	FALSE	canonical	0	0	junction_17	21.6393848290229	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824270	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115824106
ES.6807.24	chr11	-	4266	15	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-14	-4	intron_retention	FALSE	canonical	0	0	junction_7	33.7892628761606	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824317	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818683_115819313_115823614
ES.6807.25	chr11	-	4003	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	15	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.5487532222191	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTTTTCTTGGGTGTT	NA	False	NA	-6	True	AATAAA	-29	NA	115824288	115783424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115787013_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.26	chr11	-	4053	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.5487532222191	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAATCTTTTCTTGGGTGT	NA	False	NA	-7	True	AATAAA	-28	NA	115824327	115783425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115787025_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.28	chr11	-	5071	15	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	54	junction_10	13.5902125646003	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTTTTCTTGGGTG	NA	False	NA	-8	True	AATAAA	-27	NA	115824319	115783426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.29	chr11	-	3528	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-21	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	21.057499437219	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTTTTCTTGGGTG	NA	False	NA	-8	True	AATAAA	-27	NA	115824324	115783426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824202
ES.6807.3	chr11	-	4245	15	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_5	30.1472576341057	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824305	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785957_115786240_115786335_115786749_115786809_115786924_115786962_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.30	chr11	-	3853	18	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-10	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_17	21.6121841837032	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTTTTCTTGGGTG	NA	False	NA	-8	True	AATAAA	-27	NA	115824313	115783426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115823614
ES.6807.31	chr11	-	3888	18	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.7165584526064	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTTTTCTTGGGTG	NA	False	NA	-8	True	AATAAA	-27	NA	115824301	115783426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784315_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.32	chr11	-	3715	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	14	junction_18	18.4179863780551	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACAATCTTTTCTTGGG	NA	False	NA	-10	True	AATAAA	-25	NA	115824316	115783428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
ES.6807.33	chr11	-	3765	19	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	5	-8	intron_retention	FALSE	canonical	3	14	junction_18	19.0570942041585	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACAATCTTTTCTTGGG	NA	False	NA	-10	True	AATAAA	-25	NA	115824298	115783428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
ES.6807.4	chr11	-	4050	17	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_9	22.4359330929204	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824313	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.5	chr11	-	4011	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	25.9888107182394	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824303	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115820401_115820442_115821502_115821625_115823614
ES.6807.6	chr11	-	3646	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_19	18.5488797998223	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824340	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
ES.6807.7	chr11	-	4437	18	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	26	0	intron_retention	TRUE	canonical	0	0	junction_11	26.9912198975351	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824277	115783420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784546_115784772_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115795710_115795869_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6807.8	chr11	-	4767	22	NNC	ENSMUSG00000020752.12	novel	4410	19	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.8387929842387	131	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTCTTGGGTGTTTTA	NA	False	NA	-3	True	AATAAA	-32	NA	115824317	115783421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818232_115818322_115818409_115818793_115819313_115819566_115819653_115819801_115820442_115821502_115821625_115823614
ES.6807.9	chr11	-	5099	17	NIC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_10	27.5816968296006	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTGGGTGTTTT	NA	False	NA	-4	True	AATAAA	-31	NA	115824305	115783422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115783985_115784085_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115788086_115795710_115795869_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ES.6808.1	chr11	+	3456	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	295	-97	4	97	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGGATCCCAGCACCC	339	False	NA	104	True	AATAAA	-16	NA	115824402	115857648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.10	chr11	+	1229	11	NNC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	16	-874	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	98.1883903524241	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGCCTCTCCCA	415	False	NA	28	True	ATTAAA	-29	NA	115824478	115855487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848286_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.11	chr11	+	1986	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	18	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTGGGTGCACTCTGT	417	False	NA	NA	False	AATGAA	-22	NA	115824480	115856366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.12	chr11	+	3177	10	NNC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	133.646945991442	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	417	False	NA	3	True	NA	NA	NA	115824480	115857547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848286_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.13	chr11	+	2073	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	390	1191	-2	-1	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCTGTCCTTGGGTGCA	434	False	NA	NA	False	AATGAA	-16	NA	115824497	115856360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.14	chr11	+	2871	5	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	26138	-881	intron_retention	FALSE	canonical	3	311	junction_1	9.09326673973661	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCAGGTGGACTGGCC	NA	False	NA	21	True	ATTAAA	-22	NA	115850637	115855480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115851418_115852181_115852243_115852564_115852617_115853319_115854854_115855036
ES.6808.15	chr11	+	799	3	ISM	ENSMUSG00000020755.10	ENSMUST00000021101.4	2011	10	28818	672	28818	-672	3prime_fragment	FALSE	canonical	3	313	junction_1	8	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTCCTGTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	115853317	115855689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115853379_115854768_115854854_115855036
ES.6808.3	chr11	+	1247	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	338	2069	-17	-879	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGGTGGACTGGCCTC	382	False	NA	23	True	ATTAAA	-24	NA	115824445	115855482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.5	chr11	+	1116	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	-6	-889	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGGCATGTCAGGTG	393	False	NA	13	True	ATTAAA	-14	NA	115824456	115855472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.6	chr11	+	3237	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	90.9346529718518	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTTTTGTGGAGT	413	False	NA	7	True	NA	NA	NA	115824476	115857551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115824608_115826191_115826302_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.7	chr11	+	3172	10	NIC	ENSMUSG00000020755.10	novel	3654	11	NA	NA	15	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	100.552915864677	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTTGGTTTTGTGGA	414	False	NA	5	True	NA	NA	NA	115824477	115857549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115824608_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.8	chr11	+	3099	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	371	184	16	-184	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGAGGCTTGGTTTTGTT	415	False	NA	NA	False	NA	NA	NA	115824478	115857367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6808.9	chr11	+	3279	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	371	4	16	-4	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTTTGGTTTTGTG	415	False	NA	3	True	NA	NA	NA	115824478	115857547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ES.6809.1	chr11	-	2952	1	Antisense	novelGene_ENSMUSG00000020755.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTTAACTTTCAAAAAGA	NA	False	NA	NA	False	AATACA	-34	NA	115829478	115826526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_115826500_115829500
ES.681.1	chr1	+	175	1	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTCATTTGT	NA	False	NA	NA	False	NA	NA	NA	70058921	70059096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_70058900_70059100
ES.6810.1	chr11	-	2433	1	Intergenic	novelGene_5537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGCCTATTAGTAATA	6932	False	NA	NA	False	NA	NA	NA	115837051	115834618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115834600_115837100
ES.6811.1	chr11	+	5991	39	NIC	ENSMUSG00000020758.16	novel	5919	40	NA	NA	20	0	intron_retention	TRUE	canonical	0	0	junction_9	6.09118158281234	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGTCCGTTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	115865570	115899238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115865981_115868611_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.12	chr11	+	3915	25	NNC	ENSMUSG00000020758.16	novel	5584	38	NA	NA	-1496	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	5.68242294761271	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTCTGTCCGTTCTTCA	1745	False	NA	NA	False	AATAAA	-19	NA	115879267	115899238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115883867_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.13	chr11	+	3979	25	NIC	ENSMUSG00000020758.16	novel	5584	38	NA	NA	-1458	-1	intron_retention	FALSE	canonical	1	5	junction_4	5.45801525790791	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCACTCTGTCCGTTCTT	1783	False	NA	NA	False	AATAAA	-17	NA	115879305	115899236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.15	chr11	+	4037	26	NIC	ENSMUSG00000020758.16	novel	5919	40	NA	NA	-1358	-2	combination_of_known_junctions	FALSE	canonical	1	2	junction_20	5.9194594347795	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCACTCTGTCCGTTCT	1883	False	NA	NA	False	AATAAA	-16	NA	115879405	115899235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115896722_115896882_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.16	chr11	+	3959	25	ISM	ENSMUSG00000020758.16	ENSMUST00000106460.9	5919	40	13818	1	-1141	0	3prime_fragment	FALSE	canonical	1	2	junction_19	6.17735560108225	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTCTGTCCGTTCTTC	2100	False	NA	NA	False	AATAAA	-18	NA	115879622	115899237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115896722_115896882_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.17	chr11	+	3767	24	ISM	ENSMUSG00000020758.16	ENSMUST00000068981.13	5584	38	11048	-3	-1104	3	3prime_fragment	FALSE	canonical	1	3	junction_1	5.74439810953521	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCGTTCTTCACAG	2137	False	NA	NA	False	AATAAA	-22	NA	115879659	115899241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.18	chr11	+	3407	21	NNC	ENSMUSG00000020758.16	novel	5584	38	NA	NA	-30	-66	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5.87260589517124	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGAGCTGGCACAAGT	3211	False	NA	NA	False	NA	NA	NA	115880733	115899171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115883867_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.2	chr11	+	3709	26	ISM	ENSMUSG00000020758.16	ENSMUST00000106460.9	5919	40	-55	13651	-55	1	5prime_fragment	FALSE	canonical	0	0	junction_9	4.58100425671053	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGGTACGGGATTTTT	NA	False	NA	NA	False	NA	NA	NA	115865749	115885587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115865981_115868611_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087
ES.6811.3	chr11	+	5803	39	NIC	ENSMUSG00000020758.16	novel	6208	40	NA	NA	-54	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	6.30415595234351	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCACTCTGTCCGTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	115865750	115899236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115865981_115868611_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888972_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.5	chr11	+	5870	40	NIC	ENSMUSG00000020758.16	novel	6160	40	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	6.1256834206602	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTCTGTCCGTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115865849	115899237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115865981_115868611_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115896722_115896882_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.6	chr11	+	4883	32	NNC	ENSMUSG00000020758.16	novel	6160	40	NA	NA	5009	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6.34590824932452	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTCTGTCCGTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	115873620	115899237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115883867_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115896722_115896882_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.8	chr11	+	4166	27	ISM	ENSMUSG00000020758.16	ENSMUST00000106460.9	5919	40	13383	2	-1576	-1	3prime_fragment	FALSE	canonical	1	2	junction_21	5.93505282798779	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCACTCTGTCCGTTCTT	1665	False	NA	NA	False	AATAAA	-17	NA	115879187	115899236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115879390_115879482_115879582_115879715_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115896722_115896882_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6811.9	chr11	+	3981	26	NIC	ENSMUSG00000020758.16	novel	5584	38	NA	NA	-1553	-1	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	5.35163526410386	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCACTCTGTCCGTTCTT	1688	False	NA	NA	False	AATAAA	-17	NA	115879210	115899236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115879390_115879482_115879582_115879715_115879846_115880547_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ES.6812.1	chr11	-	1501	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	11	-106	11	106	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTGTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	115903534	115899176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6812.2	chr11	-	1380	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	-20	46	-20	-46	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGGGTAACATGCTCT	NA	False	NA	-16	True	AATAAA	-36	NA	115903565	115899328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6812.3	chr11	-	2041	7	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	38	-49	intron_retention	FALSE	canonical	3	761	junction_3	60.2091262923561	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGGTGGGTAACATGC	NA	False	NA	-19	True	AATAAA	-33	NA	115903507	115899331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115899541_115899628_115899792_115899873_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6812.4	chr11	-	1355	8	NNC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	52	-50	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	303.600973352208	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGAGGTGGGTAACATG	NA	False	NA	-20	True	AATAAA	-32	NA	115903493	115899332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903288
ES.6812.5	chr11	-	2134	6	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	19	-57	intron_retention	FALSE	canonical	3	761	junction_2	62.9520452408021	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCCTCCAGAGGTGGG	NA	False	NA	-27	True	AATAAA	-25	NA	115903526	115899339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115899541_115899628_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6812.6	chr11	-	3126	4	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	29	-62	intron_retention	FALSE	canonical	3	761	junction_2	54.0637483799347	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCACCTGCCTCCAGAG	NA	False	NA	-32	True	AATAAA	-20	NA	115903516	115899344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115900025_115900746_115900929_115901066_115901203_115901388
ES.6812.8	chr11	-	1308	8	NNC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	22	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	302.942103985806	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGCGGTAGCCACCTGC	NA	False	NA	-40	True	AATAAA	-12	NA	115903523	115899352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115899535_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6812.9	chr11	-	1315	8	NNC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	13	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	311.50588817444	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGGCGGTAGCCACCTG	NA	False	NA	-41	True	AATAAA	-11	NA	115903532	115899353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115899541_115899628_115899792_115899873_115900018_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ES.6813.1	chr11	+	244	1	Intergenic	novelGene_5538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCAGTATGTGAGCCA	4399	False	NA	NA	False	NA	NA	NA	115904556	115904800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115904600_115904800
ES.6814.1	chr11	-	174	1	Intergenic	novelGene_5539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115907771	115907597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115907600_115907800
ES.6815.1	chr11	-	1573	1	Intergenic	novelGene_5540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCTGTTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	115911156	115909583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115909600_115911200
ES.6815.2	chr11	-	158	1	Intergenic	novelGene_5541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	115910831	115910673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115910700_115910800
ES.6816.1	chr11	-	2924	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	4	-935	4	886	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAATAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	115915326	115911851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.11	chr11	-	2208	1	NIC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	4	-332	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2408	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTGTCAAACCTAAA	NA	False	NA	-17	True	AATAAA	-12	NA	115915326	115913118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115913100_115915300
ES.6816.12	chr11	-	1629	4	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	3	-333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6192.9084174293	2408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTAAGTGTCAAACCTAA	NA	False	NA	-18	True	AATAAA	-11	NA	115915327	115913119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115914362_115914450_115914600_115914730_115914846_115915204
ES.6816.14	chr11	-	1249	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	4	740	4	492	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGCTGGTAACACAACA	NA	False	NA	NA	False	NA	NA	NA	115915326	115913526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.15	chr11	-	1119	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	874	0	358	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTGTGTGTAATTTA	NA	False	NA	14	True	ATTAAA	-35	NA	115915330	115913660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.16	chr11	-	1185	3	NIC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	4	339	intron_retention	FALSE	canonical	3	12160	junction_2	1058	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGGGAGTCTTGTCA	NA	False	NA	-5	True	ATTAAA	-16	NA	115915326	115913679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115914605_115914707_115914846_115915204
ES.6816.17	chr11	-	1543	2	NIC	ENSMUSG00000016559.15	novel	773	3	NA	NA	4	338	intron_retention	FALSE	canonical	3	14276	junction_1	0	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGGGGAGTCTTGTC	NA	False	NA	-6	True	ATTAAA	-15	NA	115915326	115913680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115914605_115914707
ES.6816.2	chr11	-	2230	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	4	-241	4	192	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAGTGAAGCTTTAGTA	NA	False	NA	NA	False	TATAAA	-28	NA	115915326	115912545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.21	chr11	-	912	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	1	1080	1	152	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCACTGTGATAGAATGT	NA	False	NA	NA	False	AATAAA	-34	NA	115915329	115913866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.22	chr11	-	886	4	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	6	134	at_least_one_novel_splicesite	FALSE	canonical	1	291	junction_1	6154.77088661037	2387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGTGTTTAACCATAC	NA	False	NA	NA	False	AATAAA	-16	NA	115915324	115913884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115914359_115914450_115914605_115914707_115914846_115915204
ES.6816.23	chr11	-	1355	2	ISM	ENSMUSG00000016559.15	ENSMUST00000139623.2	874	3	12	-134	2	134	intron_retention	FALSE	canonical	3	13934	junction_1	0	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGTGTTTAACCATAC	NA	False	NA	NA	False	AATAAA	-16	NA	115915328	115913884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115914362_115914450
ES.6816.25	chr11	-	1442	1	NIC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	4	134	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGTGTTTAACCATAC	NA	False	NA	NA	False	AATAAA	-16	NA	115915326	115913884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115913900_115915300
ES.6816.26	chr11	-	1339	2	NIC	ENSMUSG00000016559.15	novel	773	3	NA	NA	4	134	intron_retention	FALSE	canonical	3	14276	junction_1	0	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGTGTTTAACCATAC	NA	False	NA	NA	False	AATAAA	-16	NA	115915326	115913884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115914605_115914707
ES.6816.27	chr11	-	995	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139623.2	874	3	12	-133	2	133	multi-exon	FALSE	canonical	3	12160	junction_2	887	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAAGTGTTTAACCATA	NA	False	NA	NA	False	AATAAA	-15	NA	115915328	115913885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914846_115915204
ES.6816.28	chr11	-	784	5	NNC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	6	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5882.00448401733	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCCAAGTGTTTAACCA	NA	False	NA	NA	False	AATAAA	-13	NA	115915324	115913887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115914103_115914204_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.29	chr11	-	639	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	2	1352	2	-120	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTACTTAAGTCAT	NA	False	NA	-13	True	AAGAAA	-16	NA	115915328	115914138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.3	chr11	-	1982	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	2	9	2	-9	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCTCTGTAGCCT	NA	False	NA	0	True	AATAAA	-30	NA	115915328	115912795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.32	chr11	-	1027	2	NIC	ENSMUSG00000016559.15	novel	773	3	NA	NA	7	141	intron_retention	FALSE	canonical	3	14276	junction_1	0	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTTGGTTTAATTT	NA	False	NA	-17	True	AGTAAA	-7	NA	115915323	115914193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115914605_115914707
ES.6816.33	chr11	-	686	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139623.2	874	3	13	175	3	141	multi-exon	FALSE	canonical	3	12160	junction_2	887	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTTTGGTTTAATTT	NA	False	NA	-17	True	AGTAAA	-7	NA	115915327	115914193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914846_115915204
ES.6816.4	chr11	-	1704	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	1	288	1	-288	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGAATCGAGATTCCTA	NA	False	NA	27	True	AATATA	-16	NA	115915329	115913074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.7	chr11	-	1413	5	NNC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	9	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5882.00448401733	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTGTCAAACCTAAA	NA	False	NA	-17	True	AATAAA	-12	NA	115915321	115913118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115913584_115913822_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.8	chr11	-	1535	5	NNC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	5	-332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5882.00448401733	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTGTCAAACCTAAA	NA	False	NA	-17	True	AATAAA	-12	NA	115915325	115913118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115914103_115914223_115914362_115914450_115914605_115914707_115914846_115915204
ES.6816.9	chr11	-	2104	2	NIC	ENSMUSG00000016559.15	novel	773	3	NA	NA	5	-332	intron_retention	FALSE	canonical	3	14276	junction_1	0	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTGTCAAACCTAAA	NA	False	NA	-17	True	AATAAA	-12	NA	115915325	115913118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115914605_115914707
ES.6817.1	chr11	+	202	1	Intergenic	novelGene_5542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAACCAAAGAAGTAGTAA	4337	False	NA	NA	False	NA	NA	NA	115916662	115916864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115916700_115916900
ES.6818.1	chr11	+	3852	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	-155	-1	-155	1	multi-exon	FALSE	canonical	3	42	junction_8	23.4630679058719	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8667	False	NA	20	True	AATAAA	-14	NA	115920992	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.10	chr11	+	4700	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	3	0	intron_retention	FALSE	canonical	3	78	junction_12	17.5564686607739	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8826	False	NA	19	True	AATAAA	-13	NA	115921151	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.11	chr11	+	4322	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	78	junction_12	17.3040044911163	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGCTTGTTTATATGGG	8826	False	NA	18	True	AATAAA	-12	NA	115921151	115952039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.12	chr11	+	3742	16	NNC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.6784595326199	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGCTTGTTTATATGGG	8826	False	NA	18	True	AATAAA	-12	NA	115921151	115952039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921369_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.14	chr11	+	3548	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	40.5115072815394	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8827	False	NA	19	True	AATAAA	-13	NA	115921152	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945822_115946806_115946909_115947016_115947130_115949158_115949251_115949814_115950073_115950648
ES.6818.15	chr11	+	4306	15	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	4	0	intron_retention	FALSE	canonical	2	7	junction_10	31.8168386941537	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8827	False	NA	19	True	AATAAA	-13	NA	115921152	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945822_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.16	chr11	+	3637	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.7030085621844	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8828	False	NA	19	True	AATAAA	-13	NA	115921153	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940263_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
ES.6818.17	chr11	+	3508	15	NIC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	33.0852331571235	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8828	False	NA	19	True	AATAAA	-13	NA	115921153	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.18	chr11	+	3815	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	32.0841947936294	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8833	False	NA	19	True	AATAAA	-13	NA	115921158	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944076_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.2	chr11	+	3861	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	-125	-1	-125	1	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8697	False	NA	20	True	AATAAA	-14	NA	115921022	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.20	chr11	+	4231	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	17	0	intron_retention	FALSE	canonical	3	78	junction_12	17.5150081417075	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8840	False	NA	19	True	AATAAA	-13	NA	115921165	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.21	chr11	+	3960	17	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	18	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	38.2736854771003	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8841	False	NA	19	True	AATAAA	-13	NA	115921166	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115929365_115929610_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.22	chr11	+	3841	17	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.4841740447993	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8842	False	NA	19	True	AATAAA	-13	NA	115921167	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115936560_115936687_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.23	chr11	+	4834	13	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	1	intron_retention	FALSE	canonical	3	19	junction_11	29.9286187823999	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8842	False	NA	20	True	AATAAA	-14	NA	115921167	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.24	chr11	+	3912	14	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	-3	intron_retention	FALSE	canonical	0	0	junction_1	39.8693131390235	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTGGCTTGTTTATATG	8842	False	NA	16	True	AATAAA	-10	NA	115921167	115952037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921369_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.25	chr11	+	3533	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	29.0073882214268	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8842	False	NA	19	True	AATAAA	-13	NA	115921167	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.26	chr11	+	3733	13	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_3	42.4839839102795	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8842	False	NA	19	True	AATAAA	-13	NA	115921167	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.27	chr11	+	3724	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5253689730809	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGCTTGTTTATATGGG	8847	False	NA	18	True	AATAAA	-12	NA	115921172	115952039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938487_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.28	chr11	+	3613	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	26	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	32.3061741605051	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAACTTGCCGTGGCTT	8849	False	NA	7	True	AATAAA	-1	NA	115921174	115952028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943902_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.29	chr11	+	4079	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	29	0	intron_retention	FALSE	canonical	3	78	junction_12	17.5150081417075	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8852	False	NA	19	True	AATAAA	-13	NA	115921177	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.3	chr11	+	3605	15	NNC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.2422534470142	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8782	False	NA	19	True	AATAAA	-13	NA	115921107	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921369_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.30	chr11	+	3689	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	31.2786757321271	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8852	False	NA	19	True	AATAAA	-13	NA	115921177	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945822_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.31	chr11	+	3580	16	NNC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	33.4644089543901	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGCTTGTTTATATGG	8852	False	NA	17	True	AATAAA	-11	NA	115921177	115952038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
ES.6818.32	chr11	+	5156	12	NIC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	39	0	intron_retention	FALSE	canonical	3	19	junction_11	36.3999818363409	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8862	False	NA	19	True	AATAAA	-13	NA	115921187	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814
ES.6818.33	chr11	+	3466	15	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.9850644772469	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGCTTGTTTATATGG	8874	False	NA	17	True	AATAAA	-11	NA	115921199	115952038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
ES.6818.36	chr11	+	1730	3	FSM	ENSMUSG00000020770.14	ENSMUST00000176788.2	471	3	54	-1313	54	1313	multi-exon	FALSE	canonical	2	5	junction_2	1	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTTTCAGAAGTCCAA	8877	False	NA	NA	False	TATAAA	-12	NA	115921202	115933189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_115921318_115929365_115929610_115931818
ES.6818.37	chr11	+	5504	15	NIC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	55	1	intron_retention	FALSE	canonical	3	42	junction_8	22.564759412565	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8878	False	NA	20	True	AATAAA	-14	NA	115921203	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115949251_115949814_115950073_115950648
ES.6818.38	chr11	+	3741	16	NIC	ENSMUSG00000020770.14	novel	3692	16	NA	NA	56	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	43.7591387280671	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8879	False	NA	20	True	AATAAA	-14	NA	115921204	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115929365_115929610_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.39	chr11	+	6509	14	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	57	0	intron_retention	FALSE	canonical	3	80	junction_8	15.3020863333679	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8880	False	NA	19	True	AATAAA	-13	NA	115921205	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115946909_115947016_115949251_115949814_115950073_115950648
ES.6818.4	chr11	+	3685	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	29.7564932223017	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8789	False	NA	20	True	AATAAA	-14	NA	115921114	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
ES.6818.40	chr11	+	927	4	NNC	ENSMUSG00000020770.14	novel	471	3	NA	NA	57	350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.94392028877595	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTCCTAGTTTTTTA	8880	False	NA	NA	False	ATTAAA	-42	NA	115921205	115932226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115929365_115929610_115931558_115931722_115931818
ES.6818.42	chr11	+	4341	15	NIC	ENSMUSG00000020770.14	novel	3696	16	NA	NA	61	1	intron_retention	FALSE	canonical	3	42	junction_8	23.9991496447993	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8884	False	NA	20	True	AATAAA	-14	NA	115921209	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.43	chr11	+	3823	14	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	61	1	intron_retention	FALSE	canonical	3	19	junction_12	28.9220539917308	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGTTTATATGGGAT	8884	False	NA	20	True	AATAAA	-14	NA	115921209	115952041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.44	chr11	+	3884	14	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	61	-2	intron_retention	FALSE	canonical	1	1	junction_5	33.90624037098	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGCTTGTTTATATGG	8884	False	NA	17	True	AATAAA	-11	NA	115921209	115952038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.45	chr11	+	4972	14	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	62	0	intron_retention	FALSE	canonical	3	78	junction_11	15.6590900307686	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8885	False	NA	19	True	AATAAA	-13	NA	115921210	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.46	chr11	+	2309	2	ISM	ENSMUSG00000020770.14	ENSMUST00000176788.2	471	3	6553	-343	-1781	343	3prime_fragment	FALSE	canonical	2	5	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTTTTTATGTCCTAG	NA	False	NA	NA	False	ATTAAA	-35	NA	115927701	115932219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115929610_115931818
ES.6818.47	chr11	+	1795	2	ISM	ENSMUSG00000020770.14	ENSMUST00000176788.2	471	3	8056	-1332	-278	1332	3prime_fragment	FALSE	canonical	2	5	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGTTGTGTGAAATC	NA	False	NA	NA	False	TATAAA	-31	NA	115929204	115933208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115929610_115931818
ES.6818.48	chr11	+	8000	15	ISM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	12879	2	4544	-2	3prime_fragment	FALSE	canonical	3	42	junction_7	22.5574097514293	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGGCTTGTTTATATGG	377	False	NA	17	True	AATAAA	-11	NA	115934026	115952038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.49	chr11	+	6807	7	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	826	0	intron_retention	FALSE	canonical	3	97	junction_3	10.5198225587063	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	7301	False	NA	19	True	AATAAA	-13	NA	115940950	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016
ES.6818.5	chr11	+	4015	15	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-33	0	intron_retention	FALSE	canonical	3	11	junction_12	29.772264863494	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8789	False	NA	19	True	AATAAA	-13	NA	115921114	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
ES.6818.50	chr11	+	3632	6	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	205	0	intron_retention	FALSE	canonical	3	78	junction_3	16.7020956768904	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	NA	False	NA	19	True	AATAAA	-13	NA	115944325	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115944517_115945222_115945289_115945662_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.51	chr11	+	4164	5	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-1064	0	intron_retention	FALSE	canonical	3	110	junction_3	5.44862367942584	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	NA	False	NA	19	True	AATAAA	-13	NA	115945659	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115945838_115946806_115946909_115947016_115949251_115949814_115950073_115950648
ES.6818.52	chr11	+	3994	2	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	747	0	intron_retention	FALSE	canonical	3	121	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	NA	False	NA	19	True	AATAAA	-13	NA	115947470	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115950073_115950648
ES.6818.6	chr11	+	4077	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-11	0	intron_retention	FALSE	canonical	3	78	junction_12	15.2015372477219	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8811	False	NA	19	True	AATAAA	-13	NA	115921136	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6818.7	chr11	+	5967	11	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-8	0	intron_retention	FALSE	canonical	3	19	junction_9	32.2620520116127	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8814	False	NA	19	True	AATAAA	-13	NA	115921139	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115946909_115947016_115947206_115949814_115950073_115950648
ES.6818.8	chr11	+	3905	15	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_12	32.4173202634213	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8817	False	NA	19	True	AATAAA	-13	NA	115921142	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947130_115949158_115949251_115949814_115950073_115950648
ES.6818.9	chr11	+	3791	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5253689730809	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8817	False	NA	19	True	AATAAA	-13	NA	115921142	115952040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_115921369_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ES.6819.1	chr11	-	1911	2	Antisense	novelGene_ENSMUSG00000020770.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGGAGAAGGCTCT	7689	False	NA	NA	False	NA	NA	NA	115925792	115923819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_115925197_115925258
ES.682.1	chr1	+	180	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATCCCAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	70500456	70500636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_70500500_70500600
ES.6820.1	chr11	-	2007	1	Intergenic	novelGene_5543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115936997	115934990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115935000_115937000
ES.6821.1	chr11	-	4447	33	FSM	ENSMUSG00000057948.13	ENSMUST00000106451.8	3973	33	-467	-7	-467	6	multi-exon	FALSE	canonical	2	6	junction_32	6.68246013362594	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTTGGCTTACAGTG	NA	False	NA	5	True	AATAAA	-32	NA	115969254	115952914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968488_115968770
ES.6821.10	chr11	-	3867	32	NIC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	7.77733840821659	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAAAATCTATAGTTGG	NA	False	NA	-4	True	AATAAA	-23	NA	115968791	115952923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967577_115967614_115968273_115968488_115968770
ES.6821.11	chr11	-	4211	32	FSM	ENSMUSG00000057948.13	ENSMUST00000174822.8	3337	32	-337	-537	14	-5	multi-exon	FALSE	canonical	1	1	junction_16	7.27117096203969	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTCAGAAAAATCTATAGT	NA	False	NA	-7	True	AATAAA	-20	NA	115968753	115952926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960712_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
ES.6821.12	chr11	-	3993	33	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	44	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	8.42887290433899	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTGCCCTCAGAAAAAT	NA	False	NA	-14	True	AATAAA	-13	NA	115968723	115952933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960731_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968485_115968638
ES.6821.14	chr11	-	3742	32	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	-6	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.32520333685402	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAAACATTA	NA	False	NA	-34	True	NA	NA	NA	115968793	115952953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955223_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967577_115967614_115968273_115968361_115968770
ES.6821.15	chr11	-	3935	32	NNC	ENSMUSG00000057948.13	novel	4046	32	NA	NA	-1	-34	intron_retention	FALSE	canonical	0	0	junction_27	8.78687413862243	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAATAAAAATAAAACAT	NA	False	NA	-36	True	NA	NA	NA	115968768	115952955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965271_115966530_115966712_115966933_115967020_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968361_115968740
ES.6821.16	chr11	-	3515	33	FSM	ENSMUSG00000057948.13	ENSMUST00000106451.8	3973	33	-1	459	-1	-1	multi-exon	FALSE	canonical	2	6	junction_32	6.68246013362594	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCAGGTTTTATCCTTTC	NA	False	NA	NA	False	NA	NA	NA	115968788	115953380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968488_115968770
ES.6821.17	chr11	-	391	1	Intergenic	novelGene_5544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	115962227	115961836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115961800_115962200
ES.6821.18	chr11	-	177	1	Intergenic	novelGene_5545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	115962224	115962047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115962000_115962200
ES.6821.19	chr11	-	909	6	ISM	ENSMUSG00000057948.13	ENSMUST00000155120.2	991	7	373	-8	2	8	3prime_fragment	FALSE	canonical	3	26	junction_4	7.60526133673262	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCAGAGATCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	115968414	115966214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
ES.6821.2	chr11	-	4030	32	NIC	ENSMUSG00000057948.13	novel	4046	32	NA	NA	-136	6	combination_of_known_junctions	TRUE	canonical	0	0	junction_31	7.42790531141159	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTTGGCTTACAGTG	NA	False	NA	5	True	AATAAA	-32	NA	115968013	115952914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115967732
ES.6821.20	chr11	-	1056	5	NIC	ENSMUSG00000057948.13	novel	991	7	NA	NA	61	-29	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.2941707368003	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115968706	115966251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115966712_115966933_115967001_115967095_115967156_115967577_115967614_115968273
ES.6821.4	chr11	-	4062	33	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_32	7.09801633821028	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTATAGTTGGCTTA	NA	False	NA	0	True	AATAAA	-27	NA	115968745	115952919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968485_115968638
ES.6821.5	chr11	-	6791	25	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	-509	1	intron_retention	FALSE	non_canonical	0	0	junction_7	8.76060864831256	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTATAGTTGGCTTA	NA	False	NA	0	True	AATAAA	-27	NA	115969296	115952919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115957050_115957484_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115960062_115960183_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965271_115966530_115967001_115967095_115967156_115967267_115968361_115968770
ES.6821.6	chr11	-	4053	33	NNC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.15756694348873	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCTATAGTTGGCTTA	NA	False	NA	0	True	AATAAA	-27	NA	115968790	115952919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956449_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968488_115968770
ES.6821.8	chr11	-	3925	31	NIC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	72	0	intron_retention	FALSE	canonical	3	18	junction_15	5.0403924009501	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATCTATAGTTGGCT	NA	False	NA	-2	True	AATAAA	-25	NA	115968344	115952921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967376_115967577_115967614_115968273
ES.6821.9	chr11	-	4528	30	NIC	ENSMUSG00000057948.13	novel	3973	33	NA	NA	22	0	intron_retention	FALSE	canonical	3	18	junction_15	5.1218215398284	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATCTATAGTTGGCT	NA	False	NA	-2	True	AATAAA	-25	NA	115968745	115952921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967614_115968273
ES.6822.1	chr11	-	1851	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	-20	-5	-20	5	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTCTTGTGTGGTGAC	NA	False	NA	-6	True	AGTAAA	-21	NA	115977841	115969393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.10	chr11	-	4720	5	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	8	-4	intron_retention	FALSE	canonical	3	961	junction_1	92.8503500262654	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTTCTCTGACTCTTG	NA	False	NA	-15	True	AGTAAA	-12	NA	115977790	115969402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115974774_115977692
ES.6822.11	chr11	-	2314	7	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	36	-4	intron_retention	FALSE	canonical	3	961	junction_1	102.141514032684	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTTCTCTGACTCTTG	NA	False	NA	-15	True	AGTAAA	-12	NA	115977762	115969402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.12	chr11	-	1726	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	29	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	397.416914689892	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGCTACAACTGTGA	NA	False	NA	-12	True	AATAAA	-18	NA	115977769	115969442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972143_115973097_115973238_115974664_115974774_115977692
ES.6822.13	chr11	-	3878	4	NIC	ENSMUSG00000034341.18	novel	1012	7	NA	NA	20	-45	intron_retention	FALSE	canonical	3	961	junction_1	128.532745503497	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTGCTACAACTGTG	NA	False	NA	-13	True	AATAAA	-17	NA	115977778	115969443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115973238_115974664_115974774_115977692
ES.6822.15	chr11	-	642	2	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	35	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTGCTACAACTGTG	NA	False	NA	-13	True	AATAAA	-17	NA	115977763	115969443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970051_115977728
ES.6822.16	chr11	-	3148	7	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	37	-45	intron_retention	FALSE	canonical	3	961	junction_1	77.3735527597555	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTGCTACAACTGTG	NA	False	NA	-13	True	AATAAA	-17	NA	115977761	115969443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115974774_115977692
ES.6822.17	chr11	-	1743	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	8	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	395.459536359865	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTGCTACAACTGTG	NA	False	NA	-13	True	AATAAA	-17	NA	115977790	115969443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971500_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.18	chr11	-	1726	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	-2736	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	384.602471682762	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGTTTGCTACAACT	NA	False	NA	-16	True	AATAAA	-14	NA	115975047	115969446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115974970
ES.6822.19	chr11	-	1659	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	45	122	22	-122	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGAATTCCTATTTAT	NA	False	NA	-90	True	NA	NA	NA	115977776	115969520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.2	chr11	-	1663	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	29	-680	6	1	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGACTCTTGTGTGG	NA	False	NA	-10	True	AGTAAA	-17	NA	115977792	115969397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.20	chr11	-	4067	1	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	3	193	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115977795	115973728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115973700_115977800
ES.6822.21	chr11	-	1165	2	FSM	ENSMUSG00000034341.18	ENSMUST00000129532.2	958	2	-14	-193	9	193	multi-exon	FALSE	canonical	3	1218	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	115977812	115973728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115974774_115977692
ES.6822.3	chr11	-	2231	7	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	8	-1	intron_retention	FALSE	canonical	3	961	junction_1	102.032674505115	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTGACTCTTGTGT	NA	False	NA	-12	True	AGTAAA	-15	NA	115977790	115969399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.4	chr11	-	1789	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	398.65129768114	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTGACTCTTGTGT	NA	False	NA	-12	True	AGTAAA	-15	NA	115977795	115969399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970543_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.5	chr11	-	1717	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	394.100577652612	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTGACTCTTGTG	NA	False	NA	-13	True	AGTAAA	-14	NA	115977792	115969400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971429_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.6	chr11	-	1812	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	5	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	396.934940435804	515	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTTCTCTGACTCTTGT	NA	False	NA	-14	True	AGTAAA	-13	NA	115977816	115969401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970417_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.7	chr11	-	3162	6	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	26	-3	intron_retention	FALSE	canonical	3	961	junction_1	107.565050085983	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTTCTCTGACTCTTGT	NA	False	NA	-14	True	AGTAAA	-13	NA	115977772	115969401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115971171_115971371_115971507_115972057_115973238_115974664_115974774_115977692
ES.6822.8	chr11	-	1835	8	NNC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	394.78002141208	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTTCTCTGACTCTTG	NA	False	NA	-15	True	AGTAAA	-12	NA	115977789	115969402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972012_115972151_115973101_115973238_115974664_115974774_115977692
ES.6822.9	chr11	-	1625	7	NIC	ENSMUSG00000034341.18	novel	1826	8	NA	NA	38	-4	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	397.793253112999	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTTCTCTGACTCTTG	NA	False	NA	-15	True	AGTAAA	-12	NA	115977760	115969402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115974664_115974774_115977692
ES.6823.1	chr11	-	183	1	Intergenic	novelGene_5546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACTCAC	NA	False	NA	NA	False	NA	NA	NA	115981386	115981203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115981200_115981400
ES.6824.1	chr11	+	210	1	Intergenic	novelGene_5547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAATACGCATATGC	1160	False	NA	NA	False	NA	NA	NA	115984000	115984210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_115984000_115984200
ES.6825.1	chr11	-	180	1	Intergenic	novelGene_5548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAGAAATAATA	NA	False	NA	NA	False	NA	NA	NA	115986270	115986090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_115986100_115986300
ES.6826.1	chr11	+	1208	1	Antisense	novelGene_ENSMUSG00000020773.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTTGTCTGAGGAAT	7304	False	NA	NA	False	NA	NA	NA	116000411	116001619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_116000400_116001600
ES.6827.1	chr11	-	2192	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	-2	2	-2	-2	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTCCCCCTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	116001065	115996579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ES.6827.11	chr11	-	1185	5	NNC	ENSMUSG00000020773.12	novel	1503	4	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	57.2079539924301	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGATTCCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	115998866	115996584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115997102_115997333_115997468_115997757_115997830_115998249_115998449_115998603
ES.6827.12	chr11	-	1874	3	NIC	ENSMUSG00000020773.12	novel	1503	4	NA	NA	42	-7	intron_retention	FALSE	canonical	3	121	junction_2	20	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGATTCCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	115998903	115996584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_115997468_115997757_115998449_115998603
ES.6827.6	chr11	-	1214	7	NNC	ENSMUSG00000020773.12	novel	2204	6	NA	NA	566	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	48.1202198203162	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTCCCCCTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	116000497	115996579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115996921_115997333_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ES.6827.7	chr11	-	686	4	NNC	ENSMUSG00000020773.12	novel	1503	4	NA	NA	-202	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.6192505851965	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTCCCCCTTTCATTC	NA	False	NA	NA	False	NA	NA	NA	115998111	115996579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_115996921_115997333_115997468_115997757_115997830_115997972
ES.6828.1	chr11	-	192	1	Intergenic	novelGene_5549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGGAC	9120	False	NA	NA	False	NA	NA	NA	116003598	116003406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116003400_116003600
ES.6829.1	chr11	+	155	1	Intergenic	novelGene_5550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATACATAAATATT	NA	False	NA	NA	False	NA	NA	NA	116026432	116026587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116026400_116026600
ES.683.1	chr1	+	5059	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGCAAAGTTTTGCAGG	NA	False	NA	NA	False	NA	NA	NA	71055962	71061021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71056000_71061000
ES.6830.1	chr11	-	3210	6	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	28	0	intron_retention	FALSE	canonical	3	763	junction_5	24.8724747461928	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	438	False	NA	-2	True	AATAAA	-20	NA	116029663	116022642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116025128_116025258_116026152_116029267_116029448_116029536
ES.6830.10	chr11	-	1465	9	NNC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-4	-1	intron_retention	FALSE	canonical	0	0	junction_5	356.97056513808	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	482	False	NA	-7	True	AATAAA	-15	NA	116029619	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025540_116025601_116025733_116026152_116029267_116029448_116029536
ES.6830.11	chr11	-	1214	5	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_3	359.648004999333	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	471	False	NA	-7	True	AATAAA	-15	NA	116029630	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116023383_116023568_116023728_116025081_116025128_116029267_116029448_116029536
ES.6830.12	chr11	-	1906	6	NIC	ENSMUSG00000020775.14	novel	1403	8	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	809	junction_5	24.3014402865345	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	472	False	NA	-7	True	AATAAA	-15	NA	116029629	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116026152_116029267
ES.6830.15	chr11	-	4238	1	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	496	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGTAGCCCTGGCCA	996	False	NA	NA	False	NA	NA	NA	116029105	116024867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116024900_116029100
ES.6830.16	chr11	-	696	2	FSM	ENSMUSG00000020775.14	ENSMUST00000138457.2	995	2	-5	304	-2	-304	multi-exon	FALSE	canonical	3	763	junction_1	0	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAGAAAAAATTAAC	405	False	NA	NA	False	AGTAAA	-40	NA	116029696	116028911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116029448_116029536
ES.6830.2	chr11	-	1422	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	-11	0	-11	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	396	False	NA	-2	True	AATAAA	-20	NA	116029705	116022642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ES.6830.3	chr11	-	1822	7	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-14	0	intron_retention	FALSE	canonical	3	763	junction_6	34.4722110305291	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	472	False	NA	-2	True	AATAAA	-20	NA	116029629	116022642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116026152_116029267_116029448_116029536
ES.6830.4	chr11	-	1414	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-11	1	intron_retention	FALSE	canonical	3	763	junction_7	35.5883493891596	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATATGTCTTCACTTTC	475	False	NA	-5	True	AATAAA	-17	NA	116029626	116022645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116026152_116029267_116029448_116029536
ES.6830.5	chr11	-	1746	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	763	junction_7	32.5306762604036	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	469	False	NA	-7	True	AATAAA	-15	NA	116029632	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025943_116026016_116026152_116029267_116029448_116029536
ES.6830.7	chr11	-	2619	5	ISM	ENSMUSG00000020775.14	ENSMUST00000142550.8	1403	8	2375	1	-1773	-1	intron_retention	FALSE	canonical	3	822	junction_1	23.3666428910958	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	2875	False	NA	-7	True	AATAAA	-15	NA	116027226	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258
ES.6830.8	chr11	-	1951	6	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	763	junction_5	37.711536696348	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	469	False	NA	-7	True	AATAAA	-15	NA	116029632	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116026152_116029267_116029448_116029536
ES.6830.9	chr11	-	1591	9	NNC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	272.37494263423	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	491	False	NA	-7	True	AATAAA	-15	NA	116029610	116022647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025601_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ES.6831.1	chr11	-	5344	30	FSM	ENSMUSG00000020776.19	ENSMUST00000103031.8	5252	30	-19	-73	-6	73	multi-exon	FALSE	canonical	3	14	junction_29	8.33099451920079	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTCTGCTATGTTCC	NA	False	NA	64	True	GGGGCT	-41	NA	116058998	116033037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ES.6831.10	chr11	-	1910	5	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	592	0	intron_retention	FALSE	canonical	3	43	junction_3	2.29128784747792	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116037373	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036838_116037261
ES.6831.11	chr11	-	5350	31	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	10.5379736614251	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058995	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058387
ES.6831.12	chr11	-	6464	30	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	11	0	intron_retention	FALSE	canonical	1	1	junction_25	11.751792941356	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058963	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116053392_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
ES.6831.13	chr11	-	5158	28	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	10.086593527977	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116059005	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116058387
ES.6831.15	chr11	-	4831	31	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	10.3685421668944	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058989	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058903
ES.6831.17	chr11	-	4858	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_29	10.6525496158187	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058991	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058955
ES.6831.18	chr11	-	5175	29	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_28	9.41286570691022	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058984	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
ES.6831.19	chr11	-	5087	29	NNC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	11.8678952967875	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058899	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040334_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058387
ES.6831.2	chr11	-	5381	31	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_30	9.85455337507602	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116059012	116033110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
ES.6831.20	chr11	-	5249	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.4686838361087	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGTTTTGGATTTGC	NA	False	NA	-11	True	ATTAAA	-16	NA	116058981	116033112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036375_116036457_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ES.6831.21	chr11	-	5565	33	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-118	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	15.0093395403495	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGTTTTGGATTTGC	NA	False	NA	-11	True	ATTAAA	-16	NA	116058724	116033112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116047837_116047974_116048117_116048325_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116053164_116053392_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ES.6831.22	chr11	-	3170	3	ISM	ENSMUSG00000020776.19	ENSMUST00000126861.8	3391	4	643	2	643	-1	intron_retention	FALSE	canonical	3	46	junction_1	0.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCTGTTTTGGATTTGC	NA	False	NA	-11	True	ATTAAA	-16	NA	116037322	116033112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116034293_116035258_116036587_116036660
ES.6831.25	chr11	-	4850	31	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-73	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	10.5379736614251	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTCTGTTTTGGATTTG	NA	False	NA	-12	True	ATTAAA	-15	NA	116059065	116033113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058955
ES.6831.26	chr11	-	5238	28	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	2	-2	intron_retention	FALSE	canonical	3	5	junction_27	9.57376960616242	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTCTGTTTTGGATTTG	NA	False	NA	-12	True	ATTAAA	-15	NA	116058972	116033113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
ES.6831.27	chr11	-	6118	29	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	13	junction_28	8.42395454665335	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACTTCTGTTTTGGATTT	NA	False	NA	-13	True	ATTAAA	-14	NA	116059006	116033114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958
ES.6831.31	chr11	-	4758	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-79	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_29	9.60392805091408	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACTTCTGTTTTGG	NA	False	NA	-17	True	ATTAAA	-10	NA	116059071	116033118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058955
ES.6831.32	chr11	-	5728	32	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	14.8733816527985	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCGACTTCTGTTTTG	NA	False	NA	-18	True	ATTAAA	-9	NA	116058998	116033119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048117_116048325_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116053164_116053392_116054143_116054186_116055488_116055517_116056657_116056739_116058342
ES.6831.33	chr11	-	5350	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.1012982089299	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCGACTTCTGTTTT	NA	False	NA	-19	True	ATTAAA	-8	NA	116058978	116033120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036658_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042383_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116056657_116056739_116057958_116058055_116058377
ES.6831.34	chr11	-	5336	30	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-13	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	11.7131794627774	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCGACTTCTGTTTT	NA	False	NA	-19	True	ATTAAA	-8	NA	116059005	116033120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116056657_116056739_116057958_116058055_116058377
ES.6831.36	chr11	-	5070	29	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	11.1782291138824	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTTTCGACTTCTGTT	NA	False	NA	-21	True	ATTAAA	-6	NA	116058976	116033122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037344_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
ES.6831.37	chr11	-	4678	14	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-1789	-11	intron_retention	FALSE	canonical	3	26	junction_12	6.75347817466091	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGTTTCGACTTCTGTT	NA	False	NA	-21	True	ATTAAA	-6	NA	116043410	116033122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116035369_116036250_116036369_116036448_116036587_116036660_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302
ES.6831.38	chr11	-	6127	25	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	2398	-12	intron_retention	FALSE	non_canonical	0	0	junction_12	13.7749142969707	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTTTCGACTTCTGT	NA	False	NA	-22	True	ATTAAA	-5	NA	116054311	116033123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116041672_116041844_116041940_116042247_116042344_116043302_116043771_116044771_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116051065_116052250_116052336_116054143
ES.6831.39	chr11	-	6179	28	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	997	-12	intron_retention	FALSE	canonical	0	0	junction_23	12.9366929580692	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTTTCGACTTCTGT	NA	False	NA	-22	True	ATTAAA	-5	NA	116055712	116033123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037344_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048117_116048325_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143
ES.6831.4	chr11	-	5148	30	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	11.7513882095422	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116058968	116033110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
ES.6831.40	chr11	-	5119	29	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-3	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	11.4218730370053	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGTTTCGACTTCTG	NA	False	NA	-23	True	ATTAAA	-4	NA	116058983	116033124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048612_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
ES.6831.42	chr11	-	5282	31	NNC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	11.7079744903492	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGTTTCGACTTCTG	NA	False	NA	-23	True	ATTAAA	-4	NA	116058972	116033124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046285_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058377
ES.6831.43	chr11	-	4306	30	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	-3	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_29	8.41449968768522	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATCTGTGTGTTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	116058995	116034069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ES.6831.44	chr11	-	4464	30	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-13	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	12.7886877777702	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTATCTGTGTGTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	116059005	116034070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116053164_116053392_116054143_116054186_116055488_116055517_116058377
ES.6831.45	chr11	-	4200	29	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	3	5	junction_28	9.48811017504948	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTATCTGTGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	116058973	116034072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116058377
ES.6831.46	chr11	-	4364	31	NIC	ENSMUSG00000020776.19	novel	5223	32	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_30	10.5379736614251	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGGTATCTGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	116058972	116034074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058387
ES.6831.5	chr11	-	5268	30	NIC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	9.84746929953234	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116059005	116033110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058387
ES.6831.6	chr11	-	6168	28	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-2	0	intron_retention	FALSE	canonical	3	13	junction_27	8.56492992915634	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058976	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116037448_116037529_116037653_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958
ES.6831.7	chr11	-	5175	27	NNC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	-167	0	intron_retention	FALSE	canonical	0	0	junction_7	12.2009796871171	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058773	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037815_116038533_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116058377
ES.6831.8	chr11	-	5996	18	NIC	ENSMUSG00000020776.19	novel	4651	29	NA	NA	2011	0	intron_retention	FALSE	canonical	3	15	junction_14	8.47099672217668	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116046305	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116038653_116038729_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209
ES.6831.9	chr11	-	5431	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	12.2500697661145	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116058975	116033111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036449_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116057958_116058055_116058387
ES.6832.1	chr11	+	340	1	Intergenic	novelGene_5551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	116067121	116067461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116067100_116067500
ES.6833.1	chr11	+	109	1	Intergenic	novelGene_5552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTT	3324	False	NA	NA	False	NA	NA	NA	116083937	116084046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116083900_116084000
ES.6834.1	chr11	+	1945	1	Intergenic	novelGene_5553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCTAAAAAAAAAAA	4402	False	NA	NA	False	NA	NA	NA	116085015	116086960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116085000_116087000
ES.6835.2	chr11	+	729	3	NIC	ENSMUSG00000020778.13	novel	902	4	NA	NA	13	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	63.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGTGTGTGCTGATGC	9080	False	NA	5	True	AATAAA	-12	NA	116089693	116106142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116089810_116095670_116095806_116105664
ES.6835.3	chr11	+	3455	9	Fusion	ENSMUSG00000092300.8_ENSMUSG00000020778.13	novel	915	7	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	3	junction_4	54.3202310378003	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGGTGTCAATCTTC	9089	False	NA	NA	False	AATAAA	-16	NA	116089702	116111112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664_116106254_116106818_116106945_116107236_116107507_116107596_116107768_116107857_116109124_116110479
ES.6835.4	chr11	+	3533	8	Fusion	ENSMUSG00000092300.8_ENSMUSG00000020778.13	novel	915	7	NA	NA	-9	-1	intron_retention	FALSE	canonical	1	3	junction_4	56.0316965690685	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGGTGTCAATCTTC	9101	False	NA	NA	False	AATAAA	-16	NA	116089714	116111112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664_116106254_116106818_116106945_116107236_116107507_116107596_116109124_116110479
ES.6835.5	chr11	+	3411	8	Fusion	ENSMUSG00000092300.8_ENSMUSG00000020778.13	novel	915	7	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_4	57.4179094580307	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTGGTGTCAATCTTC	9102	False	NA	NA	False	AATAAA	-16	NA	116089715	116111112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664_116106254_116106795_116106945_116107236_116107624_116107857_116109124_116110479
ES.6835.6	chr11	+	856	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	44	2	1	-2	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGTGTGTGCTGATGC	9111	False	NA	5	True	AATAAA	-12	NA	116089724	116106142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ES.6835.7	chr11	+	6489	2	ISM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	2890	6454	2786	2014	internal_fragment	FALSE	canonical	3	129	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	372	False	NA	NA	False	NA	NA	NA	116092570	116099690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116095806_116096436
ES.6835.8	chr11	+	1539	7	NNC	ENSMUSG00000092300.8	novel	915	7	NA	NA	-603	-3	intron_retention	FALSE	canonical	0	0	junction_4	2.98142396999972	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTTTGGTGTCAATCT	NA	False	NA	NA	False	AATAAA	-14	NA	116106225	116111110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116106386_116106818_116106945_116107236_116107315_116107385_116107624_116107857_116107960_116108919_116109124_116110479
ES.6835.9	chr11	+	2673	5	NIC	ENSMUSG00000092300.8	novel	915	7	NA	NA	-200	-3	intron_retention	FALSE	canonical	1	3	junction_2	2.29128784747792	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTTTGGTGTCAATCT	NA	False	NA	NA	False	AATAAA	-14	NA	116106628	116111110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116106945_116107236_116107315_116107385_116107507_116107596_116109124_116110479
ES.6836.1	chr11	-	4679	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	243	-935	-1	935	multi-exon	TRUE	canonical	3	53	junction_12	15.262593015675	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAGTTTCATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	116089628	116061778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ES.6836.12	chr11	-	5332	14	NIC	ENSMUSG00000020777.17	novel	3743	14	NA	NA	11	-4	intron_retention	FALSE	canonical	1	1	junction_11	31.3225253087291	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCTTGGCTGTTACGTG	NA	False	NA	-3	True	AATAAA	-11	NA	116089616	116062717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116074451_116080240_116080402_116089047_116089208_116089421
ES.6836.14	chr11	-	5124	11	ISM	ENSMUSG00000020777.17	ENSMUST00000148601.2	3538	13	4948	699	-2211	-699	intron_retention	FALSE	canonical	3	72	junction_2	12.8467894822014	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATCA	5216	False	NA	NA	False	ATTAAA	-31	NA	116075453	116063412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738
ES.6836.15	chr11	-	3098	15	NIC	ENSMUSG00000020777.17	novel	3743	14	NA	NA	-26	-760	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	30.2334454617696	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTTCTTGTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	116089581	116063473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240_116080402_116089047_116089208_116089421
ES.6836.16	chr11	-	3230	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	-249	762	-5	-762	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTCTTCTTGTTGTC	NA	False	NA	NA	False	NA	NA	NA	116089876	116063475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
ES.6836.17	chr11	-	3006	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	216	765	-28	-765	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTCTGTCTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	116089655	116063478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ES.6836.18	chr11	-	1825	9	ISM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	26	5776	26	2056	5prime_fragment	FALSE	canonical	2	9	junction_6	37.1172129880464	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	116089601	116068489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
ES.6836.19	chr11	-	1624	9	ISM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	22	5981	22	1851	5prime_fragment	FALSE	canonical	2	9	junction_6	37.1172129880464	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATTCGAAAGTTCCAG	NA	False	NA	NA	False	NA	NA	NA	116089605	116068694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
ES.6836.2	chr11	-	4066	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	-79	0	-79	0	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089950	116062713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ES.6836.20	chr11	-	1660	9	ISM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	221	5990	-23	1842	5prime_fragment	FALSE	canonical	3	53	junction_7	16.7663166795811	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAATTACAATTCGA	NA	False	NA	NA	False	NA	NA	NA	116089650	116068703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ES.6836.3	chr11	-	4185	15	NIC	ENSMUSG00000020777.17	novel	3987	14	NA	NA	-38	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	30.2334454617696	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCTGTTACGTGTAG	NA	False	NA	0	True	AATAAA	-14	NA	116089909	116062714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240_116080402_116089047_116089208_116089421
ES.6836.5	chr11	-	4560	15	NNC	ENSMUSG00000020777.17	novel	3743	14	NA	NA	-7379	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.4313724413339	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCTGTTACGTGTAG	NA	False	NA	0	True	AATAAA	-14	NA	116097250	116062714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080242_116080402_116089047_116089208_116089421_116090284_116097086
ES.6836.7	chr11	-	5161	12	ISM	ENSMUSG00000020777.17	ENSMUST00000148601.2	3538	13	4165	2	-2994	-2	3prime_fragment	FALSE	canonical	3	72	junction_2	12.3863427856372	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGGCTGTTACGTGTA	4433	False	NA	-1	True	AATAAA	-13	NA	116076236	116062715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289
ES.6837.1	chr11	+	6141	3	Antisense	novelGene_ENSMUSG00000034282.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTAGTGGCTTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	116123458	116130185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_116123765_116124265_116125129_116125213
ES.6838.1	chr11	-	6508	22	FSM	ENSMUSG00000034282.4	ENSMUST00000037007.4	6384	22	-124	0	-124	0	multi-exon	FALSE	canonical	1	1	junction_4	2.11355628773068	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTCCTCTCATTTG	9840	False	NA	NA	False	AATAAA	-15	NA	116129027	116111384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120400_116120570_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
ES.6839.1	chr11	+	3760	1	Antisense	novelGene_ENSMUSG00000020780.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGATGCCAGAACGCT	NA	False	NA	NA	False	NA	NA	NA	116142889	116146649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_116142900_116146600
ES.684.1	chr1	+	10067	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATTTAACGTAAGTGC	NA	False	NA	NA	False	NA	NA	NA	71131092	71141159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71131100_71141200
ES.6840.1	chr11	-	2894	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	-367	-1	-367	1	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCTGGTTTTTGCAT	9843	False	NA	-1	True	ATTAAA	-18	NA	116165410	116135990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.10	chr11	-	2421	16	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	166.276743880663	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9915	False	NA	-3	True	ATTAAA	-16	NA	116164945	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143614_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.11	chr11	-	985	4	NNC	ENSMUSG00000020780.16	novel	2330	15	NA	NA	14131	-1	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	287.567190216285	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	834	False	NA	-3	True	ATTAAA	-16	NA	116138033	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116137941
ES.6840.12	chr11	-	3082	14	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	22	-1	intron_retention	FALSE	canonical	3	572	junction_7	51.0634829397763	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9921	False	NA	-3	True	ATTAAA	-16	NA	116164939	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.13	chr11	-	2424	16	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.832369605418	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9908	False	NA	-3	True	ATTAAA	-16	NA	116164952	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136751_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143614_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156180_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.15	chr11	-	6012	12	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	24	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	195.611311339521	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGTGTCTGGTTTTTG	9923	False	NA	-4	True	ATTAAA	-15	NA	116164937	116135993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116138772_116139556_116139652_116141561_116143620_116145127_116145227_116151619_116151763_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.16	chr11	-	2345	15	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	172.40657038003	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGTGTCTGGTTTTTG	9913	False	NA	-4	True	ATTAAA	-15	NA	116164947	116135993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.17	chr11	-	1462	8	NNC	ENSMUSG00000020780.16	novel	2330	15	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	223.017524707209	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGTGTCTGGTTTTTG	9912	False	NA	-4	True	ATTAAA	-15	NA	116164948	116135993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141665_116162760_116162806_116164751
ES.6840.18	chr11	-	4028	14	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	9	-2	intron_retention	FALSE	canonical	3	586	junction_4	46.9510635328307	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGTGTCTGGTTTTTG	9908	False	NA	-4	True	ATTAAA	-15	NA	116164952	116135993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.19	chr11	-	2606	17	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	218.093443276042	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTGTGTCTGGTTTTTG	9913	False	NA	-4	True	ATTAAA	-15	NA	116164947	116135993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116146226_116146405_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.20	chr11	-	2799	15	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	3	572	junction_8	49.4370863846574	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACTGTGTCTGGTTTT	9912	False	NA	-6	True	ATTAAA	-13	NA	116164948	116135995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.21	chr11	-	2416	16	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	167.655784935153	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACTGTGTCTGGTTTT	9916	False	NA	-6	True	ATTAAA	-13	NA	116164944	116135995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156372_116159099_116159214_116162738_116162806_116164751
ES.6840.22	chr11	-	7477	11	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	5776	-4	intron_retention	FALSE	canonical	3	572	junction_7	48.0105196805867	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGACTGTGTCTGGTTTT	9115	False	NA	-6	True	ATTAAA	-13	NA	116159185	116135995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116139652_116141561_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182
ES.6840.23	chr11	-	2023	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	98	405	16	-405	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTGTTTGTGACTT	9915	False	NA	-7	True	NA	NA	NA	116164945	116136396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.24	chr11	-	1805	9	NNC	ENSMUSG00000020780.16	novel	2330	15	NA	NA	14	-10403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.157389963754	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACACTGTCTTAAGTTT	9913	False	NA	NA	False	NA	NA	NA	116164947	116150024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116150840_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.25	chr11	-	2587	1	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	-4	-22757	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	380	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTCCAAAAAAAGCAAGCAA	9895	False	NA	NA	False	NA	NA	NA	116164965	116162378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116162400_116165000
ES.6840.3	chr11	-	3517	15	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	22	0	intron_retention	FALSE	canonical	3	572	junction_8	48.6967396134443	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9921	False	NA	-2	True	ATTAAA	-17	NA	116164939	116135991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137099_116137470_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.5	chr11	-	3010	15	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	16	-1	intron_retention	FALSE	non_canonical	0	0	junction_9	172.40657038003	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9915	False	NA	-3	True	ATTAAA	-16	NA	116164945	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116152128_116153386_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.6	chr11	-	2718	15	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	14	-1	intron_retention	FALSE	canonical	3	572	junction_8	49.6101639520264	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9913	False	NA	-3	True	ATTAAA	-16	NA	116164947	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.7	chr11	-	4605	14	NNC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	26	-1	intron_retention	FALSE	canonical	3	13	junction_7	172.129853280982	419	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9925	False	NA	-3	True	ATTAAA	-16	NA	116164935	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143617_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116154124_116156182_116156379_116159099_116159214_116162738
ES.6840.8	chr11	-	4272	15	NIC	ENSMUSG00000020780.16	novel	2526	16	NA	NA	7	-1	intron_retention	FALSE	canonical	3	572	junction_8	49.2903206957077	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9906	False	NA	-3	True	ATTAAA	-16	NA	116164954	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ES.6840.9	chr11	-	4373	15	ISM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	98	1	16	-1	intron_retention	FALSE	canonical	3	572	junction_9	46.510312659382	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTCTGGTTTTTGC	9915	False	NA	-3	True	ATTAAA	-16	NA	116164945	116135992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738
ES.6841.1	chr11	-	166	1	Intergenic	novelGene_5554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTTATATAGCA	9016	False	NA	NA	False	NA	NA	NA	116166237	116166071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116166100_116166200
ES.6842.1	chr11	+	178	1	Intergenic	novelGene_5555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	116167233	116167411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116167200_116167400
ES.6843.1	chr11	-	160	1	Intergenic	novelGene_5556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATCT	-8	True	NA	NA	False	NA	NA	NA	116168179	116168019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116168000_116168200
ES.6844.1	chr11	+	207	1	Intergenic	novelGene_5557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGAGGACCCAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	116169034	116169241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116169000_116169200
ES.6845.1	chr11	-	4932	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	18	-1745	11	1745	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACAGATCATCTCCGTC	8938	False	NA	NA	False	AATAAA	-32	NA	116197542	116177081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.10	chr11	-	2103	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	0	1102	0	6	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGGGTGAGTGTGAAGTC	8920	False	NA	0	True	CATAAA	-21	NA	116197560	116179928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.12	chr11	-	2205	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	-10	1103	-10	5	multi-exon	FALSE	canonical	2	10	junction_12	61.2926847990569	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGGGTGAGTGTGAAGT	8910	False	NA	-1	True	CATAAA	-20	NA	116197570	116179929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.14	chr11	-	3114	12	ISM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	9160	1107	194	1	3prime_fragment	FALSE	canonical	3	154	junction_6	23.6559359524227	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGAGCCGGGTGAGTGTG	9939	False	NA	-5	True	CATAAA	-16	NA	116188400	116179933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369
ES.6845.16	chr11	-	4803	16	NIC	ENSMUSG00000020792.16	novel	3337	20	NA	NA	12	-1	intron_retention	FALSE	canonical	3	153	junction_13	24.6913390123384	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGAGCCGGGTGAGTG	8939	False	NA	-7	True	CATAAA	-14	NA	116197541	116179935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116197280_116197439
ES.6845.17	chr11	-	2258	20	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	70.0554983793963	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGAGCCGGGTGAGTG	8920	False	NA	-7	True	CATAAA	-14	NA	116197560	116179935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.18	chr11	-	2185	19	NNC	ENSMUSG00000020792.16	novel	3298	19	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	70.659001156572	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGAGCCGGGTGAGTG	8947	False	NA	-7	True	CATAAA	-14	NA	116197533	116179935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197416
ES.6845.19	chr11	-	2097	18	NNC	ENSMUSG00000020792.16	novel	3205	18	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	49.9287381448156	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCGAGCCGGGTGAG	8940	False	NA	-9	True	CATAAA	-12	NA	116197540	116179937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197416
ES.6845.2	chr11	-	4664	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	10	-1469	3	1469	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGACCTGAGTCTCCATC	8930	False	NA	NA	False	NA	NA	NA	116197550	116177357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.20	chr11	-	3383	4	ISM	ENSMUSG00000020792.16	ENSMUST00000126731.8	864	8	-69	5977	6	2953	5prime_fragment	FALSE	canonical	3	180	junction_1	24.0554914035583	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGCCTGCGAGCATC	8933	False	NA	NA	False	AAGAAA	-26	NA	116197547	116192484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.21	chr11	-	2472	4	ISM	ENSMUSG00000020792.16	ENSMUST00000126731.8	864	8	-69	6888	6	2042	5prime_fragment	FALSE	canonical	3	180	junction_1	24.0554914035583	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAATAAAAT	8933	False	NA	NA	False	NA	NA	NA	116197547	116193395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.3	chr11	-	3272	19	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	62.4539583499737	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGGTGGTGGAAACC	8928	False	NA	NA	False	ATTAAA	-25	NA	116197552	116178820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.4	chr11	-	3217	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	-10	-2	-10	2	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCTCTGGTGGTGGA	8910	False	NA	NA	False	ATTAAA	-21	NA	116197570	116178824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.5	chr11	-	2376	19	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	3	174	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	62.4539583499737	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8930	False	NA	0	True	NA	NA	NA	116197550	116179714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.6	chr11	-	2439	20	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	33	174	combination_of_known_splicesites	FALSE	canonical	2	4	junction_13	70.0554983793963	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8960	False	NA	0	True	NA	NA	NA	116197520	116179714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.7	chr11	-	4004	10	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	29	174	intron_retention	FALSE	canonical	3	154	junction_4	20.9873565701464	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	9774	False	NA	0	True	NA	NA	NA	116188565	116179714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116180112_116180350_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369
ES.6845.8	chr11	-	2402	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	8	888	1	174	multi-exon	FALSE	canonical	2	10	junction_12	61.2926847990569	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8928	False	NA	0	True	NA	NA	NA	116197552	116179714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6845.9	chr11	-	2317	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	0	888	0	174	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTCTGCTTTCATCC	8920	False	NA	0	True	NA	NA	NA	116197560	116179714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ES.6846.1	chr11	-	161	1	Intergenic	novelGene_5558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAAAACGATTTA	6747	False	NA	NA	False	NA	NA	NA	116199733	116199572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116199600_116199700
ES.6847.1	chr11	-	2585	3	NNC	ENSMUSG00000034227.8	novel	2623	3	NA	NA	47	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTTAAAAAAAT	NA	False	NA	NA	False	AATAAA	-10	NA	116226178	116221554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116223304_116224867_116225569_116226043
ES.6848.1	chr11	+	173	1	Intergenic	novelGene_5560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGTTCA	NA	False	NA	NA	False	NA	NA	NA	116259570	116259743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116259600_116259700
ES.6849.1	chr11	+	186	1	Intergenic	novelGene_5561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGGATTG	NA	False	NA	NA	False	NA	NA	NA	116265564	116265750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116265600_116265800
ES.685.1	chr1	-	4038	11	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	180	-32	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15.1142317039273	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTCTGTAAAAATGACTT	NA	False	NA	0	True	ATTAAA	-22	NA	71142125	71066688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71068339_71069666_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.10	chr1	-	2615	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	182	2862	182	-2862	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTTGATGCCTAAA	NA	False	NA	-34	True	AATAAA	-21	NA	71142123	71069518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.11	chr1	-	3970	11	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	180	-2870	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	13.514806694881	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGGAATTCATTTTGA	NA	False	NA	-42	True	AATAAA	-13	NA	71142125	71069526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104954_71105048_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.12	chr1	-	2630	12	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	180	-2870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.0493053169361	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGGAATTCATTTTGA	NA	False	NA	-42	True	AATAAA	-13	NA	71142125	71069526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71070012_71070517_71070616_71074993_71075045_71085836_71085900_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.13	chr1	-	3918	7	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	239	-29586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7671968107042	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCCTGCTATAGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	71142066	71096242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71098529_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.14	chr1	-	3478	7	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	203	-30062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7671968107042	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTGAGTTAATCATA	NA	False	NA	NA	False	AATAAA	-14	NA	71142102	71096718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71098529_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.2	chr1	-	1957	1	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	73654	38	73654	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTATCTTCTGTAAAAA	320	False	NA	-6	True	ATTAAA	-16	NA	71068651	71066694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71066700_71068700
ES.685.3	chr1	-	4111	12	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	180	-40	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	12.1539708846312	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTATCTTCTGTAAA	NA	False	NA	-8	True	ATTAAA	-14	NA	71142125	71066696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71068339_71069666_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.4	chr1	-	3864	10	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	211	-56	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	16.559656464499	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATTTGTGCTTGTAT	NA	False	NA	-24	True	TATAAA	-6	NA	71142094	71066712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71068339_71069666_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71141826
ES.685.5	chr1	-	3301	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	180	2178	180	-2178	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTCTGGAAATTACT	NA	False	NA	NA	False	NA	NA	NA	71142125	71068834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.6	chr1	-	6925	7	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	31607	-2829	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	15.2278983740006	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTTGTTGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	71110698	71069485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104954_71105048
ES.685.7	chr1	-	2541	10	NIC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	179	-2830	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	13.9770535053479	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTGTTGTTCTTT	NA	False	NA	-2	True	NA	NA	NA	71142126	71069486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ES.685.8	chr1	-	2468	9	NNC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	203	-2832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.162031136412	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTTGTTGTTGTTCT	NA	False	NA	-4	True	NA	NA	NA	71142102	71069488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71070012_71070517_71070616_71085836_71085974_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71141826
ES.685.9	chr1	-	1229	6	NIC	ENSMUSG00000026196.8	novel	5659	11	NA	NA	193	-2845	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	16.4487081559617	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTTTAAGATATTT	NA	False	NA	-17	True	AATAAA	-38	NA	71142112	71069501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71141826
ES.6850.1	chr11	+	199	1	Intergenic	novelGene_5562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATCACTTAAAAAAGA	2429	False	NA	NA	False	NA	NA	NA	116276602	116276801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116276600_116276800
ES.6851.1	chr11	-	4697	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-66	-12	-38	12	multi-exon	TRUE	canonical	3	28	junction_1	6.47335469348423	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTCGTTTCAGTCAGTG	3283	False	NA	NA	False	NA	NA	NA	116303896	116227166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.10	chr11	-	2641	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-2	7344	-2	-5291	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGCACGCCTTTAATCCCA	3347	False	NA	NA	False	NA	NA	NA	116303832	116234522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.11	chr11	-	2324	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-29	7688	-1	-5635	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCTGTAGGTCAGT	3320	False	NA	NA	False	NA	NA	NA	116303859	116234866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.12	chr11	-	176	1	Intergenic	novelGene_5559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGCCCAACCAAGA	4158	False	NA	NA	False	NA	NA	NA	116243049	116242873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116242900_116243000
ES.6851.13	chr11	-	1387	1	NIC	ENSMUSG00000052949.15	novel	4619	19	NA	NA	32	-8745	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGACCGCATGGTTAC	3381	False	NA	NA	False	AATAAA	-10	NA	116303798	116302411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116302400_116303800
ES.6851.3	chr11	-	4729	20	NIC	ENSMUSG00000052949.15	novel	4619	19	NA	NA	-43	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	11.6531117668379	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGTTTGTGAACGTATT	3278	False	NA	NA	False	AATAAA	-40	NA	116303901	116227180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116229657_116231163_116231205_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.5	chr11	-	2715	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-60	1964	-32	22	multi-exon	FALSE	canonical	3	28	junction_1	6.47335469348423	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGTTGGGAACTTGC	3289	False	NA	NA	False	CATAAA	-18	NA	116303890	116229142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.6	chr11	-	5163	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-40	4860	-12	-2807	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATCATTAAAAA	3309	False	NA	NA	False	NA	NA	NA	116303870	116232038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.7	chr11	-	2527	11	NNC	ENSMUSG00000052949.15	novel	3873	13	NA	NA	363	-4504	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.8949696655543	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTGTGAAAGTTCAT	NA	False	NA	NA	False	TTTAAA	-16	NA	116249544	116233735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238332_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246336_116249490
ES.6851.8	chr11	-	3478	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-52	6557	-24	-4504	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTGTGTGAAAGTTCAT	3297	False	NA	NA	False	TTTAAA	-16	NA	116303882	116233735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6851.9	chr11	-	2862	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-63	7184	-35	-5131	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCCCATCCTGCA	3286	False	NA	NA	False	AATAAA	-24	NA	116303893	116234362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ES.6852.1	chr11	+	178	1	Intergenic	novelGene_5563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCAGCCTTAACA	8551	False	NA	NA	False	NA	NA	NA	116317388	116317566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116317400_116317600
ES.6853.1	chr11	+	1599	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	-116	-1	-116	1	multi-exon	TRUE	canonical	3	1535	junction_2	51	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTTTTGTTTTTGCT	NA	False	NA	37	True	TTTAAA	-30	NA	116324803	116329904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116325255_116325384_116325448_116328819
ES.6853.10	chr11	+	4683	2	ISM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	167	4	167	-4	intron_retention	FALSE	canonical	3	1637	junction_1	0	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116325086	116329899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116325255_116325384
ES.6853.11	chr11	+	1197	2	FSM	ENSMUSG00000050628.7	ENSMUST00000144310.2	343	2	-4	-850	-4	-4	multi-exon	FALSE	canonical	3	1535	junction_1	0	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116325330	116329899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116325448_116328819
ES.6853.3	chr11	+	1679	4	NNC	ENSMUSG00000050628.7	novel	1482	3	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	770.748121416242	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGTTTTTGTTTTTG	NA	False	NA	35	True	TTTAAA	-28	NA	116324894	116329902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116325255_116325384_116325448_116326397_116326571_116328819
ES.6853.4	chr11	+	994	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	-19	507	-19	347	multi-exon	FALSE	canonical	3	1535	junction_2	51	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCTGCACACGTGT	NA	False	NA	105	True	NA	NA	NA	116324900	116329396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116325255_116325384_116325448_116328819
ES.6853.6	chr11	+	713	4	NNC	ENSMUSG00000050628.7	novel	1482	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	728.568154365503	618	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGTTTGTGTTTTTGTTT	NA	False	NA	32	True	TTTAAA	-25	NA	116324921	116329899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116325255_116325384_116325448_116328819_116329003_116329765
ES.6853.7	chr11	+	866	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	7	609	7	245	multi-exon	FALSE	canonical	3	1535	junction_2	51	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGTTCTTCAGGAGTT	NA	False	NA	3	True	AGTAAA	-12	NA	116324926	116329294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116325255_116325384_116325448_116328819
ES.6853.8	chr11	+	1085	4	NNC	ENSMUSG00000050628.7	novel	1482	3	NA	NA	34	318	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	770.748121416242	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATATAAATTTAGCTAAT	NA	False	NA	76	True	NA	NA	NA	116324953	116329367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116325255_116325384_116325448_116326397_116326571_116328819
ES.6853.9	chr11	+	1481	4	NNC	ENSMUSG00000050628.7	novel	1482	3	NA	NA	112	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	771.689200534919	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGTTTTTGTTTTTG	NA	False	NA	35	True	TTTAAA	-28	NA	116325031	116329902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116325255_116325384_116325448_116328324_116328437_116328819
ES.6854.2	chr11	-	2260	16	ISM	ENSMUSG00000070331.15	ENSMUST00000208602.2	7260	20	11023	2	-871	0	3prime_fragment	FALSE	canonical	0	0	junction_10	2.35135894513979	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTTGGGTGCCAA	NA	False	NA	NA	False	AATAAA	-8	NA	116346044	116332156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116332381_116333738_116333940_116334570_116334659_116335307_116335444_116335778_116335980_116336425_116336528_116336775_116336842_116337300_116337423_116337588_116337754_116337908_116337984_116338089_116338213_116338984_116339240_116344364_116344480_116344890_116344989_116345197_116345284_116345841
ES.6854.3	chr11	-	2493	7	NNC	ENSMUSG00000070331.15	novel	2162	14	NA	NA	961	-1	intron_retention	FALSE	canonical	0	0	junction_2	3.0368111930481	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGGAGTTGGGTGCCA	NA	False	NA	NA	False	AATAAA	-7	NA	116336856	116332157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116333940_116334570_116334659_116335096_116335200_116335307_116335444_116335778_116335980_116336425_116336528_116336775
ES.6855.1	chr11	+	4279	1	Antisense	novelGene_ENSMUSG00000015869.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGCTGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	116369685	116373964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_116369700_116374000
ES.6856.1	chr11	-	5102	12	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-5	3417	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	341.230951092469	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGTGACTAATTTTGCT	NA	False	NA	NA	False	NA	NA	NA	116381120	116358253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116358578_116358621_116360308_116360365_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.10	chr11	-	1839	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	281.657001806571	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCGGCTGCTGAGCTC	NA	False	NA	-11	True	AATAAA	-23	NA	116381184	116361674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369358_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.11	chr11	-	1724	9	FSM	ENSMUSG00000015869.17	ENSMUST00000152874.8	1691	9	-41	8	-7	-8	multi-exon	FALSE	canonical	3	22	junction_5	291.250321888234	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGTCGGCTGCTGA	NA	False	NA	-15	True	AATAAA	-19	NA	116381181	116361678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.12	chr11	-	2951	8	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	3	-8	intron_retention	FALSE	canonical	3	822	junction_4	42.820937087612	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGTCGGCTGCTGA	NA	False	NA	-15	True	AATAAA	-19	NA	116381171	116361678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.14	chr11	-	1764	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	276.4855274939	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTTCAGTCGGCTGC	NA	False	NA	-18	True	AATAAA	-16	NA	116381114	116361681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116363835_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.15	chr11	-	4134	4	NNC	ENSMUSG00000015869.17	novel	912	4	NA	NA	-220	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	410.220266036024	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTTCAGTCGGCTGC	NA	False	NA	-18	True	AATAAA	-16	NA	116368785	116361681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116364727_116366455
ES.6856.16	chr11	-	2806	9	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	1	-11	intron_retention	FALSE	canonical	3	803	junction_5	47.6718929244476	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTCTTCAGTCGGCTGC	NA	False	NA	-18	True	AATAAA	-16	NA	116381139	116361681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.17	chr11	-	1800	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	281.159503959348	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTTCAGTCGGCTG	NA	False	NA	-19	True	AATAAA	-15	NA	116381152	116361682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378990_116380873
ES.6856.18	chr11	-	5996	9	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-1	-12	intron_retention	FALSE	canonical	3	803	junction_4	45.7493169347915	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTTCAGTCGGCTG	NA	False	NA	-19	True	AATAAA	-15	NA	116381154	116361682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.19	chr11	-	4350	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-15	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	276.4855274939	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTCTTCAGTCGGCTG	NA	False	NA	-19	True	AATAAA	-15	NA	116381189	116361682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116364755_116366435_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.2	chr11	-	2994	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	20	-1173	-1	1173	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCGGAGCAAGCAGAGGTA	NA	False	NA	NA	False	NA	NA	NA	116381154	116360497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.20	chr11	-	1722	10	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	3	-14	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	278.505579880711	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGGTCTTCAGTCGGC	NA	False	NA	-21	True	AATAAA	-13	NA	116381171	116361684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370549_116376694_116376762_116378943_116378997_116380873
ES.6856.21	chr11	-	3830	7	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	7	-102	intron_retention	FALSE	canonical	3	839	junction_6	38.620662287894	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCACTGAGCTAGTCAG	NA	False	NA	-109	True	ATTAAA	-20	NA	116381133	116361772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.22	chr11	-	6453	4	NIC	ENSMUSG00000015869.17	novel	884	5	NA	NA	-9	-2402	intron_retention	FALSE	canonical	3	839	junction_3	40.8438761899776	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTAGTGCCCCTTGA	NA	False	NA	NA	False	AAAAAG	-13	NA	116381183	116364627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.23	chr11	-	4132	6	ISM	ENSMUSG00000015869.17	ENSMUST00000152874.8	1691	9	0	2987	0	-2432	5prime_fragment	FALSE	canonical	3	22	junction_2	351.853605921554	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGGAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	116381140	116364657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.24	chr11	-	191	1	Intergenic	novelGene_5564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTGTTATGCTAATT	NA	False	NA	NA	False	NA	NA	NA	116379483	116379292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116379300_116379500
ES.6856.3	chr11	-	1906	10	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-13	37	combination_of_known_junctions	FALSE	canonical	3	32	junction_7	270.156790323739	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCCTGTCGGTGCTGTG	NA	False	NA	30	True	NA	NA	NA	116381187	116361633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370666_116376694_116376762_116378943_116378997_116380873
ES.6856.4	chr11	-	1950	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	-72	-37	-72	37	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGCCTGTCGGTGCTGTG	NA	False	NA	30	True	NA	NA	NA	116381246	116361633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.5	chr11	-	3276	8	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-9	6	intron_retention	FALSE	canonical	3	839	junction_7	39.0227563122351	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCTCCCAGCTCCCT	NA	False	NA	-1	True	AATAAA	-33	NA	116381183	116361664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.6	chr11	-	3979	7	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	839	junction_6	38.620662287894	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381180	116361670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.7	chr11	-	4235	9	NNC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	381.042628028676	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGGCTGCTGAGCTCCCA	NA	False	NA	-8	True	AATAAA	-26	NA	116381184	116361671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116362382_116363002_116363150_116363769_116364759_116366444_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ES.6856.9	chr11	-	1735	9	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	379.280898543546	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCGGCTGCTGAGCTCC	NA	False	NA	-10	True	AATAAA	-24	NA	116381172	116361673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116370477_116370666_116376694_116376762_116378943_116378997_116380873
ES.6857.1	chr11	+	1760	6	FSM	ENSMUSG00000061878.17	ENSMUST00000063446.13	2527	6	760	7	-18	-1	multi-exon	FALSE	canonical	0	0	junction_4	1.49666295470958	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGCTGATCCTATCCT	NA	False	NA	NA	False	AATAAA	-11	NA	116424058	116427493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116424195_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
ES.6858.1	chr11	-	5333	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	-62	-66	-62	66	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCTGATGTTGCTGTC	7403	False	NA	0	True	ATTAAA	-18	NA	116472335	116428499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.13	chr11	-	5739	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-54	-3	intron_retention	FALSE	canonical	2	105	junction_3	24.7417126276659	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTTTGGGGGGAGTT	7411	False	NA	-2	True	ATTAAA	-16	NA	116472327	116428568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.14	chr11	-	3195	2	ISM	ENSMUSG00000020802.9	ENSMUST00000134102.2	3550	9	2988	8	2988	-8	intron_retention	FALSE	canonical	3	183	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCATTTTTTTGGGGG	1952	False	NA	-7	True	ATTAAA	-11	NA	116431855	116428573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116430538_116430624
ES.6858.17	chr11	-	5216	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-32	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.6016586964825	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTTAACTTGCATT	7433	False	NA	-17	True	ATTAAA	-1	NA	116472305	116428583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430676_116430753_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.2	chr11	-	6486	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-40	65	intron_retention	FALSE	canonical	3	132	junction_9	21.5915621379176	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTGATGTTGCTGT	7425	False	NA	-1	True	ATTAAA	-17	NA	116472313	116428500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.20	chr11	-	6222	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-87	-21	intron_retention	FALSE	canonical	3	132	junction_10	21.3420799126983	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTTTTAACTTGC	7378	False	NA	-20	True	TATAAA	-14	NA	116472360	116428586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.21	chr11	-	5302	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	15	-21	intron_retention	FALSE	canonical	2	105	junction_3	25.5437737031943	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTTTTAACTTGC	7480	False	NA	-20	True	TATAAA	-14	NA	116472258	116428586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.22	chr11	-	5307	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-8	-21	intron_retention	FALSE	canonical	2	105	junction_3	21.5702884484654	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTTTTAACTTGC	7457	False	NA	-20	True	TATAAA	-14	NA	116472281	116428586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.25	chr11	-	6063	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-41	-22	intron_retention	FALSE	canonical	2	105	junction_2	25.5720333350496	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTTTTTTAACTTG	7424	False	NA	-21	True	TATAAA	-13	NA	116472314	116428587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430683_116430757_116430962_116431912_116432050_116432164_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.26	chr11	-	4008	4	ISM	ENSMUSG00000020802.9	ENSMUST00000134102.2	3550	9	1135	22	1135	-22	intron_retention	FALSE	canonical	2	105	junction_3	36.3073301445069	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTTTTTTAACTTG	99	False	NA	-21	True	TATAAA	-13	NA	116433708	116428587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912
ES.6858.27	chr11	-	5234	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-58	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5157722525259	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTTTTTTTTAACTT	7407	False	NA	-22	True	TATAAA	-12	NA	116472331	116428588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430532_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.28	chr11	-	4950	19	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-19	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.9403706497738	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTTTTTTTTAACTT	7446	False	NA	-22	True	TATAAA	-12	NA	116472292	116428588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116429074_116429324_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.29	chr11	-	5222	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-49	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	42.4181687259396	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTTTTTTTTTAACTT	7416	False	NA	-22	True	TATAAA	-12	NA	116472322	116428588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432041_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.3	chr11	-	5255	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-61	64	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_10	40.7732356749479	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGCTGATGTTGCTG	7404	False	NA	-2	True	ATTAAA	-16	NA	116472334	116428501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435946_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.30	chr11	-	5079	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	-82	208	-82	-208	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGATGCGTCTTGTCAGC	7383	False	NA	34	True	NA	NA	NA	116472355	116428773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.34	chr11	-	4911	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-55	-274	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_10	40.7732356749479	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTAATAACTCTTACTA	7410	False	NA	-32	True	AATAAA	-14	NA	116472328	116428839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435946_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.35	chr11	-	5163	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-7	-274	intron_retention	FALSE	canonical	2	105	junction_3	25.4189889649451	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTAATAACTCTTACTA	7458	False	NA	-32	True	AATAAA	-14	NA	116472280	116428839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.36	chr11	-	4825	19	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-7	-274	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.9403706497738	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTAATAACTCTTACTA	7458	False	NA	-32	True	AATAAA	-14	NA	116472280	116428839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116429432_116429544_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.38	chr11	-	4928	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-10	-277	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	45.1491185581113	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATACTAATAACTCTTA	7455	False	NA	-35	True	AATAAA	-11	NA	116472283	116428842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435183_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.39	chr11	-	5928	17	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-55	-283	intron_retention	FALSE	canonical	3	132	junction_10	21.3420799126983	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAAGATACTAATAA	7410	False	NA	-41	True	AATAAA	-5	NA	116472328	116428848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.4	chr11	-	5628	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-7	63	intron_retention	FALSE	canonical	2	105	junction_3	25.0877570849918	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCAGGCTGATGTTGCT	7458	False	NA	-3	True	ATTAAA	-15	NA	116472280	116428502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.41	chr11	-	5283	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-8	-283	intron_retention	FALSE	canonical	2	105	junction_3	25.0877570849918	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAAGATACTAATAA	7457	False	NA	-41	True	AATAAA	-5	NA	116472281	116428848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.42	chr11	-	6163	14	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-48	-283	intron_retention	FALSE	canonical	2	105	junction_3	27.8646347512844	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAAGATACTAATAA	7417	False	NA	-41	True	AATAAA	-5	NA	116472321	116428848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116433707_116434233_116434847_116435173_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.43	chr11	-	5482	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-22	-297	intron_retention	FALSE	canonical	2	105	junction_3	26.2526189169766	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATCTCAAAAGC	7443	False	NA	-55	True	NA	NA	NA	116472295	116428862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.44	chr11	-	4755	5	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-7	-1120	intron_retention	FALSE	canonical	3	169	junction_4	16.6188898546203	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCAGTTATGTTTCAA	NA	False	NA	NA	False	NA	NA	NA	116434850	116429685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116432050_116432164_116434559_116434691
ES.6858.6	chr11	-	6223	16	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-41	0	intron_retention	FALSE	canonical	2	105	junction_3	26.1168315246871	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGGGAGTTGGC	7424	False	NA	1	True	ATTAAA	-19	NA	116472314	116428565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.8	chr11	-	5210	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.7143131762423	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGGGGGAGTTGG	7434	False	NA	0	True	ATTAAA	-18	NA	116472304	116428566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116430538_116430624_116430683_116430757_116430938_116431913_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6858.9	chr11	-	5811	13	NIC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	-4	-1	intron_retention	FALSE	canonical	2	105	junction_1	27.5267546620051	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGGGGGAGTTGG	7461	False	NA	0	True	ATTAAA	-18	NA	116472277	116428566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434847_116435173_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ES.6859.1	chr11	-	3696	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	-87	-16	-40	16	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCTCCAAGAGAAGGAAA	NA	False	NA	1	True	ATTAAA	-35	NA	116515113	116488974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.10	chr11	-	3744	20	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	37.5324052046124	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515039	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116499137_116499280_116501129_116501306_116515003
ES.6859.11	chr11	-	4324	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-19	0	intron_retention	FALSE	canonical	2	65	junction_12	16.1799996150572	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515092	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.12	chr11	-	3532	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	29.3256386048927	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515123	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.14	chr11	-	3951	18	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_12	30.8326210211059	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515109	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494877_116495203_116495534_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.15	chr11	-	3647	19	NNC	ENSMUSG00000020806.16	novel	3855	19	NA	NA	-1245	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	30.3128237541575	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116516318	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116516237
ES.6859.16	chr11	-	3761	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-14	0	intron_retention	FALSE	canonical	2	65	junction_11	16.1279486185813	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515087	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116490886_116491041_116491223_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.17	chr11	-	5391	14	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-15	0	intron_retention	FALSE	canonical	2	65	junction_8	16.5082012969061	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515041	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116491512_116491720_116491816_116491911_116491976_116492110_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.18	chr11	-	2391	8	NIC	ENSMUSG00000020806.16	novel	3855	19	NA	NA	364	0	intron_retention	FALSE	canonical	3	118	junction_1	7.52953368748825	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	1560	False	NA	-19	True	ATTAAA	-15	NA	116493057	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116490886_116491041_116491223_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492790_116493014
ES.6859.20	chr11	-	3663	11	NIC	ENSMUSG00000020806.16	novel	3855	19	NA	NA	-2480	0	intron_retention	FALSE	canonical	2	65	junction_9	18.135324645564	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116495901	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494877_116495203_116495333_116495786
ES.6859.21	chr11	-	3469	18	NNC	ENSMUSG00000020806.16	novel	3855	19	NA	NA	8096	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	37.7066623760742	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116506930	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116506873
ES.6859.22	chr11	-	3944	17	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-14	0	intron_retention	FALSE	canonical	2	65	junction_10	15.1398429235577	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515087	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116490886_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.23	chr11	-	4469	17	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_10	29.1364650180834	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116515100	116488994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495202_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.3	chr11	-	3341	17	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	39.3874980165026	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515129	116488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.4	chr11	-	4462	15	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	31.6283423659275	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515074	116488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116491512_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.5	chr11	-	4026	11	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-2806	0	intron_retention	FALSE	canonical	2	65	junction_8	18.1714061095998	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116496227	116488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494877_116495203_116495333_116495786_116495991_116496068
ES.6859.6	chr11	-	3628	19	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	8095	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_18	29.5301164538472	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116506931	116488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116506873
ES.6859.8	chr11	-	3572	19	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.32763479236	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515093	116488990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495903_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.6859.9	chr11	-	3868	19	NNC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	-28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.9796227090632	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGCCTTTTGCCTTAGA	NA	False	NA	-16	True	ATTAAA	-18	NA	116515101	116488991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495534_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ES.686.1	chr1	-	179	1	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCAAACATGAGG	NA	False	NA	NA	False	NA	NA	NA	71228134	71227955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_71228000_71228100
ES.6860.1	chr11	+	178	1	Intergenic	novelGene_5565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTATTTTATTTTTTT	NA	False	NA	14	True	NA	NA	NA	116516687	116516865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116516700_116516900
ES.6861.1	chr11	-	177	1	Intergenic	novelGene_5566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	6683	False	NA	NA	False	NA	NA	NA	116522881	116522704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116522700_116522900
ES.6862.1	chr11	+	209	1	Intergenic	novelGene_5567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTTTTTATTTTTATT	NA	False	NA	NA	False	AATAAA	-4	NA	116527591	116527800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116527600_116527800
ES.6863.1	chr11	-	2079	4	FSM	ENSMUSG00000020810.6	ENSMUST00000021166.6	2331	4	252	0	252	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCTCTGCTTGATCTT	4501	False	NA	0	True	ATTAAA	-21	NA	116544887	116536420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116537819_116540108_116540273_116540609_116540842_116544602
ES.6864.1	chr11	-	175	1	Intergenic	novelGene_5568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3000	False	NA	NA	False	NA	NA	NA	116546388	116546213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116546200_116546400
ES.6865.1	chr11	+	644	5	FSM	ENSMUSG00000075410.14	ENSMUST00000116318.3	799	5	155	0	107	0	multi-exon	FALSE	canonical	1	1	junction_1	3.83242742918897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGTAAAGACTGCTTT	NA	False	NA	NA	False	AATAAA	-37	NA	116548088	116559213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116548134_116548363_116548433_116550123_116550203_116550558_116550654_116558857
ES.6865.2	chr11	+	793	4	NNC	ENSMUSG00000075410.14	novel	934	6	NA	NA	1201	0	intron_retention	FALSE	canonical	1	1	junction_1	4.02768199119819	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGTAAAGACTGCTTT	NA	False	NA	NA	False	AATAAA	-37	NA	116549182	116559213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116549446_116550123_116550203_116550558_116550654_116558857
ES.6866.1	chr11	+	2022	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	-36	2	-27	1	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116562458	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
ES.6866.10	chr11	+	512	2	ISM	ENSMUSG00000020812.19	ENSMUST00000239362.2	524	4	1236	-3	1236	1	3prime_fragment	FALSE	canonical	3	112	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116564978	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116565202_116566333
ES.6866.2	chr11	+	888	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	-25	2	-25	1	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116562460	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ES.6866.3	chr11	+	3918	2	Fusion	ENSMUSG00000020812.19_ENSMUSG00000065640.3	novel	611	4	NA	NA	-9	1	intron_retention	FALSE	canonical	3	182	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116562476	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116564898_116565125
ES.6866.4	chr11	+	875	6	FSM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	-21	3	-2	1	multi-exon	FALSE	canonical	3	20	junction_5	61.1901952930369	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116562492	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566314
ES.6866.5	chr11	+	2206	4	FSM	ENSMUSG00000020812.19_ENSMUSG00000065094.3	ENSMUST00000144049.8	966	4	-29	-1211	2	0	multi-exon	FALSE	canonical	3	135	junction_1	19.4422220952236	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562504	116566624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763
ES.6866.6	chr11	+	3403	3	ISM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	-7	1	0	0	intron_retention	FALSE	canonical	3	135	junction_1	18	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562506	116566624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116562583_116562989_116563182_116563489
ES.6866.7	chr11	+	767	5	FSM	ENSMUSG00000020812.19	ENSMUST00000239226.2	1257	5	488	2	114	1	multi-exon	FALSE	canonical	3	112	junction_4	28.7347785792757	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116562988	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ES.6866.8	chr11	+	796	4	FSM	ENSMUSG00000020812.19	ENSMUST00000239363.2	1631	4	838	-3	-206	1	multi-exon	FALSE	canonical	3	112	junction_3	32.5371582450998	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116563267	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116563565_116564763_116564898_116565125_116565202_116566333
ES.6866.9	chr11	+	500	3	ISM	ENSMUSG00000020812.19	ENSMUST00000239362.2	524	4	1020	-3	1020	1	3prime_fragment	FALSE	canonical	3	112	junction_2	35	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGTAGCATTGTGGGT	NA	False	NA	1	True	AATAAA	-14	NA	116564762	116566622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116564898_116565125_116565202_116566333
ES.6867.1	chr11	+	5034	1	Genic_Genomic	ENSMUSG00000020812.19	novel	NA	NA	NA	NA	8776	1654	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116572518	116577552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_116572500_116577600
ES.6867.2	chr11	+	177	1	Intergenic	novelGene_5569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACTCACA	NA	False	NA	NA	False	NA	NA	NA	116574337	116574514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116574300_116574500
ES.6867.3	chr11	+	2507	1	Genic_Genomic	ENSMUSG00000020812.19	novel	NA	NA	NA	NA	11733	2084	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTGATTTTATGACA	NA	False	NA	NA	False	NA	NA	NA	116575475	116577982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_116575500_116578000
ES.6868.1	chr11	-	2950	8	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	4	-814	intron_retention	TRUE	canonical	3	10	junction_3	7.67184090405574	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTTCCACATTTCCA	NA	False	NA	2	True	AATAAA	-21	NA	116585690	116567528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116576092_116576661_116576837_116581137_116581199_116585262
ES.6868.2	chr11	-	2245	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	-4	1402	-4	-816	multi-exon	FALSE	canonical	3	12	junction_5	7.34421541078419	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTTTTCCACATTTC	NA	False	NA	0	True	AATAAA	-19	NA	116585698	116567530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
ES.6868.3	chr11	-	3739	4	NIC	ENSMUSG00000110170.2	novel	1683	3	NA	NA	-3661	778	intron_retention	FALSE	canonical	3	15	junction_3	8.28653526310404	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTTTTCCACATTTC	5717	False	NA	0	True	AATAAA	-19	NA	116575777	116567530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116568508_116569291_116569392_116570732_116572789_116575171
ES.6868.4	chr11	-	2296	9	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-19	-821	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.98670991868693	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAATGAGCTTTTCCAC	NA	False	NA	-5	True	AATAAA	-14	NA	116585713	116567535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116575311_116575980_116576092_116576661_116576837_116581137_116581199_116585262
ES.6868.5	chr11	-	2589	8	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-2	-821	intron_retention	FALSE	canonical	0	0	junction_6	10.3844467687921	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAATGAGCTTTTCCAC	NA	False	NA	-5	True	AATAAA	-14	NA	116585437	116567535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116576092_116576661_116576835_116581137_116581199_116585262
ES.6868.6	chr11	-	1462	1	NIC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-7	-2335	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTGGTAAAAGGTTCC	9118	False	NA	NA	False	NA	NA	NA	116570511	116569049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116569000_116570500
ES.6869.1	chr11	-	117	1	Intergenic	novelGene_5570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATTATTATATGTA	9794	False	NA	-4	True	NA	NA	NA	116595242	116595125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116595100_116595200
ES.687.1	chr1	+	179	1	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAATACTCCCCAGTT	NA	False	NA	NA	False	NA	NA	NA	71519449	71519628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71519400_71519600
ES.6870.1	chr11	+	155	1	Intergenic	novelGene_5571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAAATAAAT	9310	False	NA	NA	False	NA	NA	NA	116603006	116603161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116603000_116603200
ES.6871.1	chr11	-	179	1	Intergenic	novelGene_5572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGTCTGGAG	9910	False	NA	NA	False	NA	NA	NA	116670688	116670509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116670500_116670700
ES.6872.1	chr11	-	2052	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	11	0	11	0	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGTTCTTAAACGTT	6337	False	NA	NA	False	NA	NA	NA	116718861	116693887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ES.6872.11	chr11	-	1698	5	NNC	ENSMUSG00000020814.14	novel	757	5	NA	NA	0	1148	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.1592640943814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGGTTACCGTGTG	6359	False	NA	NA	False	AATAAA	-11	NA	116718839	116697406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116698250_116698376_116698795_116702748_116702843_116707010_116707069_116718554
ES.6872.12	chr11	-	1698	5	NNC	ENSMUSG00000020814.14	novel	757	5	NA	NA	1	1148	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.1592640943814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGGTTACCGTGTG	6360	False	NA	NA	False	AATAAA	-11	NA	116718838	116697406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116698237_116698362_116698795_116702748_116702843_116707010_116707069_116718554
ES.6872.13	chr11	-	1735	5	NNC	ENSMUSG00000020814.14	novel	757	5	NA	NA	-9	1145	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.1592640943814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAACCTTGGTTACCGT	6317	False	NA	NA	False	AATAAA	-8	NA	116718881	116697409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116698275_116698403_116698795_116702748_116702843_116707010_116707069_116718554
ES.6872.2	chr11	-	1897	5	NNC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	7	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.492717931762	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGAAGCCGTTCTTAA	6333	False	NA	NA	False	NA	NA	NA	116718865	116693892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116694930_116695083_116695481_116702748_116702843_116707010_116707069_116718554
ES.6872.3	chr11	-	1587	5	NNC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	-10	-332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.492717931762	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCGAAATATGGAGACCGGA	6316	False	NA	-4	True	AATAAA	-24	NA	116718882	116694219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116694930_116695083_116695481_116702748_116702843_116707010_116707069_116718554
ES.6872.4	chr11	-	1761	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	-32	334	-32	-334	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGAAATATGGAGACCG	6294	False	NA	-6	True	AATAAA	-22	NA	116718904	116694221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ES.6872.6	chr11	-	680	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	33	1350	0	-1350	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGATCTGCAATTTA	6359	False	NA	-4	True	TATAAA	-19	NA	116718839	116695237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ES.6872.7	chr11	-	3672	1	NIC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	19917	-1353	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTAAGGATCTGCAAT	6255	False	NA	-7	True	TATAAA	-16	NA	116698912	116695240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116695200_116698900
ES.6872.8	chr11	-	1741	5	NNC	ENSMUSG00000020814.14	novel	757	5	NA	NA	1	1157	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.1592640943814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACCGTGTGTTTCTTCAG	6327	False	NA	NA	False	AATAAA	-20	NA	116718871	116697397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116698270_116698394_116698795_116702748_116702843_116707010_116707069_116718554
ES.6872.9	chr11	-	1702	5	NNC	ENSMUSG00000020814.14	novel	757	5	NA	NA	1	1151	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.1592640943814	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTTACCGTGTGTTT	6360	False	NA	NA	False	AATAAA	-14	NA	116718838	116697403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116698258_116698382_116698795_116702748_116702843_116707010_116707069_116718554
ES.6873.1	chr11	+	3154	1	Genic_Genomic	ENSMUSG00000090266.11	novel	NA	NA	NA	NA	-316	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTGTTCTTTTTTG	8352	False	NA	6	True	AATAAA	-11	NA	116733787	116736941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_116733800_116736900
ES.6873.10	chr11	+	1699	5	Fusion	ENSMUSG00000090266.11_ENSMUSG00000020818.17	novel	1276	5	NA	NA	5	-879	intron_retention	FALSE	canonical	0	0	junction_4	13.5531361684298	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGCCGTGTTGCGTAAC	8980	False	NA	NA	False	AATGAA	-16	NA	116734415	116744005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116734601_116736644_116736772_116739079_116739185_116739830_116739965_116742857
ES.6873.11	chr11	+	1095	4	NNC	ENSMUSG00000090266.11	novel	541	4	NA	NA	6	-2	intron_retention	FALSE	canonical	3	16	junction_3	10.8730042868667	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTCAATGGGTATGAA	8981	False	NA	15	True	CATAAA	-15	NA	116734416	116740453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739830
ES.6873.12	chr11	+	5498	2	NIC	ENSMUSG00000090266.11	novel	1785	3	NA	NA	8	3	intron_retention	FALSE	canonical	3	137	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATGGGTATGAAGATGA	8983	False	NA	20	True	CATAAA	-20	NA	116734418	116740458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116739185_116739726
ES.6873.13	chr11	+	2853	17	Fusion	ENSMUSG00000090266.11_ENSMUSG00000020818.17	novel	3298	13	NA	NA	-30	0	multi-exon	TRUE	canonical	0	0	junction_4	29.5444580251525	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	9033	False	NA	5	True	AATAAA	-16	NA	116734468	116765538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.14	chr11	+	807	6	NNC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	47.2016948848238	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	9105	False	NA	17	True	CATAAA	-17	NA	116734540	116740455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739830_116739965_116740041_116740127_116740215
ES.6873.15	chr11	+	2440	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-382	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	31.3329136738022	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116742883	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116743188_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764663
ES.6873.16	chr11	+	2550	14	NNC	ENSMUSG00000020818.17	novel	2586	14	NA	NA	64	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	22.2938949373879	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116743329	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.17	chr11	+	2966	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-593	925	-68	-2	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744052	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.18	chr11	+	2270	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-57	-2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	28.7146747217986	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744063	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116744166_116744825_116745000_116745468_116745525_116749299_116749408_116750149_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.19	chr11	+	2965	13	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-39	-2	intron_retention	FALSE	canonical	0	0	junction_7	24.7700536042124	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744081	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752522_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.2	chr11	+	995	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	270	11	-7	-11	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGCTTAGACTACTCC	8938	False	NA	4	True	ATTAAA	-6	NA	116734373	116740555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ES.6873.20	chr11	+	2264	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	21.0108453257306	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744094	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116744166_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.21	chr11	+	3623	12	NIC	ENSMUSG00000020818.17	novel	2586	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	74	junction_11	6.31671009674189	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	5	True	AATAAA	-16	NA	116744114	116765538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116745000_116745468_116745525_116749299_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.22	chr11	+	2182	14	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-20	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.6806417003936	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAAGAGTATTTACT	NA	False	NA	1	True	AATAAA	-12	NA	116744567	116765534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744584_116744825_116745000_116745468_116745525_116749299_116749408_116750149_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.23	chr11	+	2348	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-13	-2	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744574	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.24	chr11	+	1224	10	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-2	4541	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.64098759787715	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGCTCTTCATGTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	116744585	116757036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716
ES.6873.25	chr11	+	3053	13	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	62	junction_1	9.16363586259418	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744586	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.26	chr11	+	2272	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8406941640727	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAAGAGTATTTACT	NA	False	NA	1	True	AATAAA	-12	NA	116744590	116765534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116744672_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.27	chr11	+	2961	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	5	-116	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTTTGTGTCGATG	NA	False	NA	NA	False	NA	NA	NA	116744592	116766167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.28	chr11	+	6552	10	NIC	ENSMUSG00000020818.17	novel	4263	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	74	junction_9	6.52819147625261	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744592	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116745000_116745468_116745525_116749299_116750205_116750322_116751944_116752348_116752494_116754731_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.29	chr11	+	1316	5	NNC	ENSMUSG00000020818.17	novel	1194	11	NA	NA	5	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	36.1420807370024	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744592	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750150_116764816
ES.6873.3	chr11	+	1152	5	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	2	6	intron_retention	FALSE	canonical	3	38	junction_2	48.2668364407696	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGTATGAAGATGATCA	8947	False	NA	23	True	CATAAA	-23	NA	116734382	116740461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116740127_116740215
ES.6873.30	chr11	+	2480	14	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	5	-4	intron_retention	FALSE	non_canonical	0	0	junction_10	31.9407735935039	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAAGAGTATTTACT	NA	False	NA	1	True	AATAAA	-12	NA	116744592	116765534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116761907_116761964_116762119_116762295_116764069_116764206_116764606
ES.6873.31	chr11	+	3173	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-53	178	5	0	multi-exon	FALSE	canonical	3	74	junction_12	6.07076326887045	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGCGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	116744592	116766283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.32	chr11	+	2291	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	22.5315032577335	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744606	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750149_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.33	chr11	+	2740	10	NIC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-17	-6068	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.64098759787715	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTTTTGTGCTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	116744628	116758595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716
ES.6873.34	chr11	+	2705	13	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_8	25.2168374085429	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744646	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752522_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069
ES.6873.35	chr11	+	2225	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	24.0113385444924	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116744647	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750174_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.36	chr11	+	447	1	NIC	ENSMUSG00000020818.17	novel	2586	14	NA	NA	3	13	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGTTTTTCAGCCTA	NA	False	NA	18	True	AATAAA	-31	NA	116744648	116745095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116744600_116745100
ES.6873.37	chr11	+	1154	9	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	-1	4541	intron_retention	FALSE	canonical	0	0	junction_8	28.49561369755	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGAGCTCTTCATGTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	116744653	116757036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756814
ES.6873.38	chr11	+	2016	11	ISM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	4601	925	-720	-2	3prime_fragment	FALSE	canonical	3	74	junction_10	6.21610810716802	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	NA	False	NA	3	True	AATAAA	-14	NA	116749246	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ES.6873.39	chr11	+	1931	9	NNC	ENSMUSG00000020818.17	novel	3298	13	NA	NA	1761	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.8713824683404	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGAGTATTTACTGG	14	False	NA	3	True	AATAAA	-14	NA	116751727	116765536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116761867_116761964_116762119_116762295_116764069_116764206_116764606
ES.6873.4	chr11	+	1174	6	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	44.7812460746684	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTACTCCCAATCATT	8950	False	NA	12	True	ATTAAA	-14	NA	116734385	116740563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ES.6873.40	chr11	+	227	1	Genic_Genomic	ENSMUSG00000020818.17	novel	NA	NA	NA	NA	7090	49	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGCACTACCAATGCCC	NA	False	NA	NA	False	NA	NA	NA	116766283	116766510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_116766300_116766500
ES.6873.5	chr11	+	1082	6	NNC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	51.1194679158537	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	8952	False	NA	17	True	CATAAA	-17	NA	116734387	116740455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116739965_116740041_116740127_116740197
ES.6873.6	chr11	+	1057	4	FSM	ENSMUSG00000090266.11	ENSMUST00000176799.8	847	4	-110	-100	2	-11	multi-exon	FALSE	canonical	3	104	junction_1	14.8996644257513	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGCTTAGACTACTCC	8953	False	NA	4	True	ATTAAA	-6	NA	116734388	116740555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116734601_116739079_116739185_116739726_116740127_116740215
ES.6873.7	chr11	+	573	2	FSM	ENSMUSG00000090266.11	ENSMUST00000128784.2	585	2	2	10	2	-10	multi-exon	FALSE	canonical	3	40	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTTTTTGAATCAAAG	8953	False	NA	14	True	AATAAA	-19	NA	116734388	116736949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116734601_116736588
ES.6873.8	chr11	+	1564	2	ISM	ENSMUSG00000090266.11	ENSMUST00000176799.8	847	4	-87	1	1	-1	intron_retention	FALSE	canonical	3	104	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCAATGGGTATGAAG	8976	False	NA	16	True	CATAAA	-16	NA	116734411	116740454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116734601_116739079
ES.6873.9	chr11	+	851	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	312	113	5	-2	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACTCAATGGGTATGAA	8980	False	NA	15	True	CATAAA	-15	NA	116734415	116740453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ES.6874.1	chr11	-	3848	4	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-555	0	intron_retention	FALSE	canonical	3	272	junction_2	28.1937739383873	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734830	116728257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116731372_116731894_116732182_116733157
ES.6874.10	chr11	-	2851	5	NIC	ENSMUSG00000056962.12	novel	1437	5	NA	NA	3	0	intron_retention	FALSE	canonical	3	254	junction_4	31.693847983481	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734178	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.14	chr11	-	2852	6	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	3	0	intron_retention	FALSE	canonical	2	5	junction_2	126.539480005254	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734178	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116729955_116730663_116730758_116731273_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.15	chr11	-	3506	5	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	-41	0	intron_retention	FALSE	canonical	3	26	junction_1	107.464819824908	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734316	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116729955_116730663_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.16	chr11	-	1620	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734177	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.17	chr11	-	3219	3	NIC	ENSMUSG00000056962.12	novel	1201	6	NA	NA	-134	-1	intron_retention	FALSE	canonical	3	291	junction_2	24	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGGACAGCTTTCT	NA	False	NA	-9	True	AATAAA	-14	NA	116733680	116728259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116732182_116733157
ES.6874.18	chr11	-	2930	5	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-38	-1	intron_retention	FALSE	canonical	3	250	junction_1	16.2692194035239	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTGGACAGCTTTCT	NA	False	NA	-9	True	AATAAA	-14	NA	116734313	116728259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.2	chr11	-	1818	7	NIC	ENSMUSG00000056962.12	novel	1196	6	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734332	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.3	chr11	-	2141	6	FSM	ENSMUSG00000056962.12	ENSMUST00000141735.8	2072	6	-70	1	4	0	multi-exon	FALSE	canonical	3	26	junction_2	108.952466699933	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734177	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116728590_116729815_116729955_116730663_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.4	chr11	-	1711	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	-44	1	-44	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734319	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.5	chr11	-	1669	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734315	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.7	chr11	-	4215	4	NIC	ENSMUSG00000056962.12	novel	1437	5	NA	NA	-41	0	intron_retention	FALSE	canonical	3	254	junction_3	15.1070255914995	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734316	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116731372_116731894_116732182_116733157_116733547_116733890
ES.6874.8	chr11	-	4934	2	ISM	ENSMUSG00000056962.12	ENSMUST00000130120.2	4538	3	-52	0	13	0	intron_retention	FALSE	canonical	3	291	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734168	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_116732182_116733157
ES.6874.9	chr11	-	2414	6	NNC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.68769660458	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGACAGCTTTCTT	NA	False	NA	-8	True	AATAAA	-15	NA	116734287	116728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116729325_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ES.6875.1	chr11	-	5870	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	-31	2881	intron_retention	FALSE	canonical	3	1775	junction_1	0	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAATGTGGTTCCCA	5972	False	NA	NA	False	NA	NA	NA	116743951	116737845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116743158_116743393
ES.6875.12	chr11	-	1994	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	2	-2	intron_retention	FALSE	canonical	3	23	junction_2	824.490145483862	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGAATGTGTCCTGGTCT	6005	False	NA	-12	True	ATTAAA	-24	NA	116743918	116740733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116741788_116742473_116742578_116742846_116743158_116743393
ES.6875.14	chr11	-	2758	3	NNC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	0	-10	intron_retention	FALSE	canonical	0	0	junction_1	887.5	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTTTGAGAATGTGT	6003	False	NA	-20	True	ATTAAA	-16	NA	116743920	116740741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116742285_116742469_116743158_116743393
ES.6875.15	chr11	-	1719	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	1	179	1	-26	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCATCCTTGTGTTGTGA	6004	False	NA	NA	False	GATAAA	-40	NA	116743919	116740905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116741788_116742846_116743158_116743393
ES.6875.16	chr11	-	1279	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	4	616	4	-409	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTAATTTGTTCATATAT	6007	False	NA	NA	False	ATTAAA	-15	NA	116743916	116741342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116741788_116742846_116743158_116743393
ES.6875.17	chr11	-	1162	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	1	736	1	-529	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGGCCTCCTGACTT	6004	False	NA	-2	True	ATTAAA	-15	NA	116743919	116741462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116741788_116742846_116743158_116743393
ES.6875.18	chr11	-	2012	2	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	1	-738	intron_retention	FALSE	canonical	3	1775	junction_1	0	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGTCTAACTTTTTA	6004	False	NA	-5	True	ATTAAA	-14	NA	116743919	116741671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116743158_116743393
ES.6875.2	chr11	-	2494	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	-597	2	-597	1	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTCCTGGTCTTTTGT	5406	False	NA	-7	True	ATTAAA	-29	NA	116744517	116740728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116741788_116742846_116743158_116743393
ES.6875.3	chr11	-	3191	1	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6003	False	NA	-8	True	ATTAAA	-28	NA	116743920	116740729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116740700_116743900
ES.6875.4	chr11	-	3558	2	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	-604	-1	intron_retention	FALSE	canonical	3	1775	junction_1	0	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	5399	False	NA	-9	True	ATTAAA	-27	NA	116744524	116740730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116743158_116743393
ES.6875.5	chr11	-	1393	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	746.295890083521	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6003	False	NA	-9	True	ATTAAA	-27	NA	116743920	116740730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116741180_116741681_116741788_116742846_116743158_116743393
ES.6875.6	chr11	-	2451	3	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	1	-1	intron_retention	FALSE	canonical	3	235	junction_1	770	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	-9	True	ATTAAA	-27	NA	116743919	116740730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116741180_116741681_116743158_116743393
ES.6875.8	chr11	-	1496	5	FSM	ENSMUSG00000034120.19	ENSMUST00000136914.8	1336	5	-21	-139	1	-1	multi-exon	FALSE	canonical	3	23	junction_3	732.164428253654	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6004	False	NA	-9	True	ATTAAA	-27	NA	116743919	116740730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_116741180_116741681_116741788_116742473_116742578_116742846_116743158_116743393
ES.6875.9	chr11	-	2267	4	NNC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	787.220849994883	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	6003	False	NA	-9	True	ATTAAA	-27	NA	116743920	116740730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_116741180_116741681_116742285_116742469_116743158_116743393
ES.6876.1	chr11	+	234	1	Intergenic	novelGene_5573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTCGGGAGGC	NA	False	NA	NA	False	AAGAAA	-36	NA	116800588	116800822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116800600_116800800
ES.6876.2	chr11	+	345	1	Intergenic	novelGene_5574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116800589	116800934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116800600_116800900
ES.6877.1	chr11	+	4319	17	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	8.87764045228235	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	1747	False	NA	NA	False	AATAAA	-32	NA	116809627	116877774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868500_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.10	chr11	+	2909	16	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	6	-1687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	8.46062776761998	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCCTTGCCTTCTTC	1814	False	NA	NA	False	AAGAAA	-23	NA	116809694	116876079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868500_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700
ES.6877.11	chr11	+	4660	21	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.3408507418493	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATGAAGAAATTGGTG	1824	False	NA	NA	False	AATAAA	-18	NA	116809704	116877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116826124_116826193_116826909_116826958_116827529_116827737_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116865017_116865133_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.13	chr11	+	4167	17	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	35	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.9537379464729	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTGAGATGATGAAGAA	1843	False	NA	NA	False	AATAAA	-11	NA	116809723	116877753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838066_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864243_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.14	chr11	+	4037	16	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.3011307202224	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATTGGTGGGATTT	1876	False	NA	NA	False	AATAAA	-24	NA	116809756	116877766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857540_116857665_116859210_116859345_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.15	chr11	+	4106	16	NNC	ENSMUSG00000043857.17	novel	2568	7	NA	NA	12173	471	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.4871909340602	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCTCCACAGGGGTGG	8632	False	NA	NA	False	AATACA	-20	NA	116821861	116878245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116822033_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868500_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.16	chr11	+	3847	16	NNC	ENSMUSG00000043857.17	novel	2568	7	NA	NA	12174	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.4871909340602	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGATGAAGAAATTGG	8633	False	NA	NA	False	AATAAA	-16	NA	116821862	116877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116822277_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864243_116868500_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.17	chr11	+	5337	7	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-1995	0	intron_retention	FALSE	canonical	1	4	junction_1	12.0369800568452	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	8109	False	NA	NA	False	AATAAA	-32	NA	116861903	116877774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116865024_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.18	chr11	+	6650	7	NNC	ENSMUSG00000043857.17	novel	2568	7	NA	NA	-313	-7	intron_retention	FALSE	canonical	2	3	junction_1	12.3928742966809	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGATGAAGAAATTGGT	9791	False	NA	NA	False	AATAAA	-17	NA	116863585	116877759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116863654_116864126_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.19	chr11	+	6827	6	NIC	ENSMUSG00000043857.17	novel	2568	7	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	31	junction_2	3.96988664825584	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATGAAGAAATTGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	116863882	116877760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.2	chr11	+	4295	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-49	2	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	6.60462669270565	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATTGGTGGGATTTTT	1759	False	NA	NA	False	AATAAA	-26	NA	116809639	116877768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.20	chr11	+	2592	7	FSM	ENSMUSG00000043857.17	ENSMUST00000126757.2	2568	7	-16	-8	-16	0	multi-exon	FALSE	canonical	3	13	junction_1	8.89600409672168	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	NA	False	NA	NA	False	AATAAA	-32	NA	116863882	116877774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.21	chr11	+	1238	6	ISM	ENSMUSG00000043857.17	ENSMUST00000126757.2	2568	7	-10	1692	-10	-1692	5prime_fragment	FALSE	canonical	3	13	junction_1	8.47112743381895	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCCCCCTGGCCTTGCCT	NA	False	NA	NA	False	AAGAAA	-18	NA	116863888	116876074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700
ES.6877.22	chr11	+	3367	7	NNC	ENSMUSG00000043857.17	novel	2568	7	NA	NA	79	3	intron_retention	FALSE	canonical	1	2	junction_1	12.7497276659369	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGGTGGGATTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	116863977	116877769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116865133_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.3	chr11	+	4251	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-27	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	8.87764045228235	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGAAGAAATTGGTGG	1781	False	NA	NA	False	AATAAA	-19	NA	116809661	116877761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864243_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.4	chr11	+	4392	18	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	10.5302332903307	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	1783	False	NA	NA	False	AATAAA	-32	NA	116809663	116877774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116865017_116865133_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.5	chr11	+	3863	14	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-24	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	9.67825599233945	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGATGAAGAAATTGG	1784	False	NA	NA	False	AATAAA	-16	NA	116809664	116877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.6	chr11	+	4124	16	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	-19	-8	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	8.95519712544373	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATGATGAAGAAATTGG	1789	False	NA	NA	False	AATAAA	-16	NA	116809669	116877758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.8	chr11	+	4231	17	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	8.87764045228235	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAGAAATTGGTGGGA	1809	False	NA	NA	False	AATAAA	-21	NA	116809689	116877763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864243_116868500_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6877.9	chr11	+	4340	18	NNC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.1919481058573	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGAAGAAATTGGTGG	1814	False	NA	NA	False	AATAAA	-19	NA	116809694	116877761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857540_116857665_116859210_116859345_116864126_116864258_116865017_116865133_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ES.6878.1	chr11	-	1036	4	Antisense	novelGene_ENSMUSG00000043857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAGAGACCCTTAACCA	NA	False	NA	NA	False	AATAAA	-30	NA	116865189	116860352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_116860861_116862952_116863179_116864568_116864659_116864977
ES.6879.1	chr11	-	1062	2	Intergenic	novelGene_5575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGACATGACTGGGCAT	NA	False	NA	NA	False	AATAAA	-35	NA	116890579	116887257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116888202_116890461
ES.688.1	chr1	+	2631	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	0	214	0	-214	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTGTTT	NA	False	NA	27	True	AATAAA	-27	NA	71596308	71618576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.11	chr1	+	3225	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	70	-450	7	450	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGGCTCATAAATTA	NA	False	NA	NA	False	AATAAA	-12	NA	71596378	71619240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.12	chr1	+	4016	14	NIC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	8	-227	intron_retention	FALSE	canonical	3	576	junction_4	31.6377424220207	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596379	71618563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71617101_71617710
ES.688.15	chr1	+	1878	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	88	879	25	-879	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATCTGGGTGTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	71596396	71617911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.16	chr1	+	1700	8	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	11810	228	94	-228	3prime_fragment	FALSE	canonical	3	578	junction_2	49.8896742005471	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTGTGGTTACTTTT	NA	False	NA	13	True	AATAAA	-13	NA	71608118	71618562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.17	chr1	+	1072	1	NIC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	9466	-228	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTGTGGTTACTTTT	1981	False	NA	13	True	AATAAA	-13	NA	71617490	71618562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71617500_71618600
ES.688.2	chr1	+	2781	16	NNC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	-5	-229	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	163.260473545259	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTGTGGTTACTTT	NA	False	NA	12	True	AATAAA	-12	NA	71596332	71618561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71616148_71616944_71617101_71617710
ES.688.4	chr1	+	3575	15	NIC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	0	-227	intron_retention	FALSE	canonical	3	576	junction_4	38.8926439716052	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596337	71618563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71617101_71617710
ES.688.5	chr1	+	2601	16	NNC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	0	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	163.14078446408	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596337	71618563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612208_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.6	chr1	+	2350	13	NIC	ENSMUSG00000026192.14	novel	2845	16	NA	NA	6	-227	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	181.235957310414	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTGTGGTTACTTTTG	NA	False	NA	14	True	AATAAA	-14	NA	71596343	71618563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71596434_71596655_71596783_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.8	chr1	+	2801	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	49	-5	-14	5	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTGGCTGATCTTT	NA	False	NA	20	True	AATAAA	-20	NA	71596357	71618795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.688.9	chr1	+	2290	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	64	491	1	-491	multi-exon	FALSE	canonical	3	576	junction_4	38.3577313661217	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTCCTGTTTGGTATA	NA	False	NA	NA	False	NA	NA	NA	71596372	71618299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ES.6880.1	chr11	-	174	1	Intergenic	novelGene_5576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATCAACCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	116936306	116936132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116936100_116936300
ES.6881.1	chr11	-	176	1	Intergenic	novelGene_5577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAGATTGGAGACC	NA	False	NA	NA	False	NA	NA	NA	116945094	116944918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116944900_116945100
ES.6882.1	chr11	-	175	1	Intergenic	novelGene_5578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGTGAGACTCG	NA	False	NA	NA	False	NA	NA	NA	116946722	116946547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116946500_116946700
ES.6883.1	chr11	-	219	1	Intergenic	novelGene_5579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	116956599	116956380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116956400_116956600
ES.6884.1	chr11	+	631	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	-24	-7	-24	7	multi-exon	FALSE	canonical	3	615	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGTTCAATGATATCT	851	False	NA	27	True	AATAAA	-23	NA	116967584	116969788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116968029_116969601
ES.6884.2	chr11	+	646	1	FSM	ENSMUSG00002076896.1	ENSMUST00020182044.1	193	1	-454	1	-454	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGCTGAAGCTGTGGG	881	False	NA	24	True	NA	NA	NA	116967614	116968260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116967600_116968300
ES.6884.3	chr11	+	2152	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTTCCATTGTTCAA	895	False	NA	19	True	AATAAA	-15	NA	116967628	116969780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_116967600_116969800
ES.6885.1	chr11	+	1933	1	Intergenic	novelGene_5580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTTTAAAATTTTT	7206	False	NA	NA	False	NA	NA	NA	116973939	116975872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116973900_116975900
ES.6886.1	chr11	+	334	1	Intergenic	novelGene_5581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATTTGTTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	116982821	116983155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116982800_116983200
ES.6887.1	chr11	-	1068	2	NIC	ENSMUSG00000087057.8	novel	753	3	NA	NA	31	0	intron_retention	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCCATTTCTCCCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	116987822	116985910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_116986619_116987462
ES.6888.1	chr11	+	854	1	Intergenic	novelGene_5582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATTCTGTCAGGTC	NA	False	NA	NA	False	NA	NA	NA	116990571	116991425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116990600_116991400
ES.6889.1	chr11	-	130	1	Intergenic	novelGene_5583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116992077	116991947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_116991900_116992100
ES.689.1	chr1	+	179	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATTT	5691	False	NA	NA	False	NA	NA	NA	71621200	71621379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71621200_71621400
ES.6890.1	chr11	+	4232	1	Intergenic	novelGene_5584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCTCATATTTTT	NA	False	NA	NA	False	NA	NA	NA	116994398	116998630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_116994400_116998600
ES.6890.10	chr11	+	2715	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-86	2025	-16	-316	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTGTCCACTAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	117005977	117048069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.12	chr11	+	4667	16	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_3	92.1621759002394	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117006011	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032520_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.13	chr11	+	4770	17	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	28	-3	intron_retention	TRUE	canonical	1	1	junction_2	118.966316136123	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117006025	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032040_117032125_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.15	chr11	+	4577	15	NIC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	-22	-3	intron_retention	FALSE	canonical	1	2	junction_1	92.8679389328344	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117006041	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117006178_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.17	chr11	+	4304	17	FSM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	-6	-1709	-6	0	multi-exon	FALSE	canonical	2	9	junction_16	87.2585955651362	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	False	NA	8	True	AATAAA	-18	NA	117006057	117050094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117048084
ES.6890.18	chr11	+	3038	7	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	1	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	134.228246737496	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117006064	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034630_117047691
ES.6890.19	chr11	+	4649	16	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	5	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	92.2069170700092	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117006068	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034600_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.2	chr11	+	2968	17	NNC	ENSMUSG00000020823.17	novel	518	2	NA	NA	-11594	-2	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_1	113.366231055593	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	116994399	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116994684_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ES.6890.20	chr11	+	4560	16	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_11	91.6084421146144	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117006068	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041073_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.21	chr11	+	2586	17	FSM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	5	-2	5	2	multi-exon	FALSE	canonical	2	9	junction_16	87.2585955651362	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTCAAATCTTTTGATA	NA	False	NA	5	True	ATTAAA	-19	NA	117006068	117048387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117048084
ES.6890.22	chr11	+	4989	17	NNC	ENSMUSG00000020823.17	novel	2866	17	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	114.194734992468	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117006100	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117042854_117043030_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ES.6890.23	chr11	+	4294	13	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	26422	5	-13409	-2	3prime_fragment	FALSE	canonical	3	319	junction_2	25.0693482608189	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117032485	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.24	chr11	+	3776	13	NNC	ENSMUSG00000020823.17	novel	2866	17	NA	NA	-11781	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	99.9490147803147	509	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117034113	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117048110
ES.6890.25	chr11	+	3776	10	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	29610	26	-10221	-23	3prime_fragment	FALSE	canonical	3	320	junction_2	22.8813364023074	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATAAATGTGAACTGTT	NA	False	NA	-18	True	AATACA	-37	NA	117035673	117050068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.26	chr11	+	3688	9	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	31868	5	-7963	-2	3prime_fragment	FALSE	canonical	3	320	junction_1	23.9970701336642	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117037931	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.27	chr11	+	3487	10	NNC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	-7834	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	115.646758880248	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117038060	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047734_117047805
ES.6890.28	chr11	+	3663	4	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	37275	2	-2556	1	3prime_fragment	FALSE	canonical	3	367	junction_1	5.79271573232759	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTCCTTTTCTTCTT	NA	False	NA	6	True	AATAAA	-16	NA	117043338	117050092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.29	chr11	+	3567	3	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	39314	0	-517	0	3prime_fragment	FALSE	canonical	3	372	junction_1	4.5	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	False	NA	8	True	AATAAA	-18	NA	117045377	117050094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117046298_117047186_117047366_117047626
ES.6890.3	chr11	+	4794	16	NNC	ENSMUSG00000020823.17	novel	518	2	NA	NA	-11567	0	intron_retention	FALSE	canonical	1	7	junction_1	89.4758564579792	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	5	True	AATAAA	-15	NA	116994426	117050091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_116994684_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.30	chr11	+	4373	1	NIC	ENSMUSG00000020823.17	novel	2866	17	NA	NA	-180	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	508	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAAGAGTGTCCTTTTC	NA	False	NA	1	True	AATAAA	-11	NA	117045714	117050087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117045700_117050100
ES.6890.4	chr11	+	3435	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-453	1672	-383	37	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTCCGTGAACTTG	NA	False	NA	40	True	NA	NA	NA	117005610	117048422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.5	chr11	+	2985	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	-116	-3	-112	0	multi-exon	FALSE	canonical	3	28	junction_16	82.8488599423673	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	False	NA	8	True	AATAAA	-18	NA	117005881	117050094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ES.6890.6	chr11	+	4825	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	-171	0	-101	0	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	False	NA	8	True	AATAAA	-18	NA	117005892	117050094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.8	chr11	+	4586	15	NIC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	-17	-2	intron_retention	FALSE	canonical	0	0	junction_2	94.5066945042649	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	False	NA	3	True	AATAAA	-13	NA	117005976	117050089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117006178_117007985_117008079_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6890.9	chr11	+	4606	15	NIC	ENSMUSG00000020823.17	novel	4654	16	NA	NA	-17	-3	intron_retention	FALSE	canonical	0	0	junction_4	95.4372322844834	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGAGTGTCCTTTTCT	NA	False	NA	2	True	AATAAA	-12	NA	117005976	117050088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ES.6891.1	chr11	-	3136	1	Intergenic	novelGene_5585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAAAACAGTTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	117005817	117002681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117002700_117005800
ES.6891.2	chr11	-	2304	1	Intergenic	novelGene_5586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAGAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	117005817	117003513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117003500_117005800
ES.6892.1	chr11	-	2582	2	Antisense	novelGene_ENSMUSG00000020823.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACAACAAACCAACCCAG	NA	False	NA	NA	False	NA	NA	NA	117030050	117027257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_117028551_117028761
ES.6893.1	chr11	-	812	2	Intergenic	novelGene_5587	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	117066033	117065125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117065657_117065752
ES.6894.1	chr11	+	3634	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	-30	12	-30	0	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	3668	False	NA	91	True	AATAAA	-16	NA	117090456	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.10	chr11	+	3628	11	NNC	ENSMUSG00000059248.14	novel	3784	11	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	236.279495513259	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	602	False	NA	91	True	AATAAA	-16	NA	117156977	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117157172_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.11	chr11	+	6554	9	NIC	ENSMUSG00000059248.14	novel	3784	11	NA	NA	218	2	intron_retention	FALSE	canonical	3	88	junction_1	235.990465909113	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	914	False	NA	88	True	AATAAA	-13	NA	117157289	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.12	chr11	+	3663	11	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	15918	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.377863331862	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117172989	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117173222_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.13	chr11	+	3569	11	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-18323	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.377863331862	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117180656	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117180795_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.14	chr11	+	3822	10	ISM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	23764	0	-18144	0	3prime_fragment	FALSE	canonical	3	104	junction_1	170.013797551918	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117180835	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.15	chr11	+	2863	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-15873	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.451640316068	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117183106	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117183178_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.16	chr11	+	3012	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117198880	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.17	chr11	+	5934	8	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	14	2	intron_retention	FALSE	canonical	3	78	junction_1	197.693640540621	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117198993	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117199098_117242254_117242447_117242974_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117250297_117251248
ES.6894.18	chr11	+	3017	11	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	282.785095081053	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117198993	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117248218_117248337_117250244_117250297_117251248
ES.6894.19	chr11	+	3124	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	651	-4	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	200.265811015581	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117199630	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117199969_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.2	chr11	+	1988	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	11	1617	11	-158	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGCTCTTATTGGCT	3709	False	NA	NA	False	NA	NA	NA	117090497	117251534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.20	chr11	+	2876	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-5806	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	201.514818865071	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	6599	False	NA	91	True	AATAAA	-16	NA	117211452	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117211534_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.21	chr11	+	3183	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-261	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	196.831569283656	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117216997	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117217386_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.22	chr11	+	3683	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-251	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	201.514818865071	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117217007	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117217896_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.23	chr11	+	2967	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	201.202557478285	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117217183	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117217356_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.24	chr11	+	2915	10	NIC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	199.641345083293	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117217215	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117217336_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.26	chr11	+	3054	11	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.956202493732	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117217257	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117217386_117241604_117241739_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.27	chr11	+	1276	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	41	-158	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	196.831569283656	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGCTCTTATTGGCT	NA	False	NA	NA	False	NA	NA	NA	117217299	117251534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117217386_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.28	chr11	+	1295	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-576	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.451640316068	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTGTGCTCTTATTGG	NA	False	NA	NA	False	NA	NA	NA	117221969	117251532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117222077_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.29	chr11	+	2870	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-553	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.451640316068	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117221992	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117222077_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.3	chr11	+	3765	13	NNC	ENSMUSG00000059248.14	novel	3616	12	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	300.438418075245	667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	3723	False	NA	91	True	AATAAA	-16	NA	117090511	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117248654_117248841_117250244_117250297_117251248
ES.6894.30	chr11	+	2862	10	NNC	ENSMUSG00000059248.14	novel	2924	10	NA	NA	-27	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	202.139360312766	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117222518	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117222595_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.31	chr11	+	2945	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	-16	-5	-16	0	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117222529	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.32	chr11	+	1313	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	8	1603	8	-161	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGTGTGCTCTTATTG	NA	False	NA	NA	False	NA	NA	NA	117222553	117251531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.33	chr11	+	3163	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	35	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.63720764834	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGAGTTCTCTTTGGC	NA	False	NA	96	True	AATAAA	-21	NA	117222580	117253144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117222680_117223032_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.34	chr11	+	3315	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	40	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	207.63720764834	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117222585	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117222680_117222861_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.35	chr11	+	2738	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	207.63720764834	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117223244	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248_117252070_117252178
ES.6894.36	chr11	+	3022	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	75	-165	-8	164	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGACATCTGACGCCCT	NA	False	NA	NA	False	NA	NA	NA	117223245	117253315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.37	chr11	+	5546	9	FSM	ENSMUSG00000059248.14	ENSMUST00000155331.8	4863	9	-8	-675	-8	-4	multi-exon	FALSE	canonical	3	306	junction_1	113.195558106314	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117223245	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117250297_117251248
ES.6894.39	chr11	+	1238	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	79	1615	-4	-157	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCTCTTATTGGCTG	NA	False	NA	NA	False	NA	NA	NA	117223249	117251535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.4	chr11	+	168	1	Intergenic	novelGene_5588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAATAAAAAAAAGAAAA	9283	False	NA	NA	False	NA	NA	NA	117101277	117101445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117101300_117101400
ES.6894.40	chr11	+	2305	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	207.63720764834	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	False	NA	82	True	AATAAA	-7	NA	117223249	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248_117251318_117251845
ES.6894.41	chr11	+	2960	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	259.606413634178	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117223249	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117248218_117248337_117250244_117250297_117251248
ES.6894.42	chr11	+	2948	11	NNC	ENSMUSG00000059248.14	novel	2932	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	256.956202493732	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117223265	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117223297_117228571_117228694_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.43	chr11	+	1533	3	NNC	ENSMUSG00000059248.14	novel	4863	9	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	153	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117223279	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117223297_117242254_117242324_117251689
ES.6894.44	chr11	+	3075	9	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	2442	0	intron_retention	FALSE	canonical	0	0	junction_1	213.703065022475	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117225695	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117225794_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247536_117250244_117250297_117251248
ES.6894.45	chr11	+	2796	9	ISM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	19083	11	-1752	0	3prime_fragment	FALSE	canonical	3	610	junction_8	24.1062102994228	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	577	False	NA	91	True	AATAAA	-16	NA	117242253	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.46	chr11	+	4101	3	NNC	ENSMUSG00000059248.14	novel	555	2	NA	NA	-2343	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	305	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	6166	False	NA	91	True	AATAAA	-16	NA	117247842	117253139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117248938_117249181_117250297_117251248
ES.6894.5	chr11	+	3858	11	FSM	ENSMUSG00000059248.14	ENSMUST00000106354.9	3869	11	2	9	2	-4	multi-exon	FALSE	canonical	0	0	junction_1	237.377863331862	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	7840	False	NA	82	True	AATAAA	-7	NA	117123112	117253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117123546_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.6	chr11	+	8276	1	Antisense	novelGene_ENSMUSG00000086050.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTCTGACTGTAT	2181	False	NA	NA	False	NA	NA	NA	117146021	117154297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_117146000_117154300
ES.6894.7	chr11	+	3482	11	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-1977	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.377863331862	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117155094	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117155146_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.8	chr11	+	3618	11	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	-1436	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	237.157837736812	663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTCTGGAGTTC	NA	False	NA	88	True	AATAAA	-13	NA	117155635	117253136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117155823_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6894.9	chr11	+	4190	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	-402	-4	-402	4	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGAGTTCTCTTTGG	294	False	NA	95	True	AATAAA	-20	NA	117156669	117253143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ES.6895.1	chr11	-	3843	1	Intergenic	novelGene_5589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAGTCAGC	NA	False	NA	NA	False	NA	NA	NA	117237407	117233564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117233600_117237400
ES.6896.1	chr11	-	180	1	Intergenic	novelGene_5590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCGCGAG	NA	False	NA	NA	False	NA	NA	NA	117255679	117255499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117255500_117255700
ES.6897.1	chr11	-	514	4	Intergenic	novelGene_5591	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCGCCAGAGACAAAGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	117302617	117298664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117298870_117299317_117299429_117301886_117302033_117302565
ES.6897.2	chr11	-	911	4	Intergenic	novelGene_5592	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.54606056566195	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCCGCCAGAGACAAA	NA	False	NA	NA	False	AATAAA	-18	NA	117302632	117298668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117298870_117299317_117299429_117301886_117302033_117302179
ES.6898.1	chr11	-	4921	2	Intergenic	novelGene_5593	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTGCGTGTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	117387438	117381502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117381657_117382671
ES.6899.1	chr11	+	178	1	Intergenic	novelGene_5594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	117424658	117424836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117424700_117424800
ES.69.1	chr1	+	205	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTTAAAAAACAACAATAA	8120	False	NA	NA	False	NA	NA	NA	9844170	9844375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9844200_9844400
ES.690.1	chr1	+	2034	1	Antisense	novelGene_ENSMUSG00000026193.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGCTGACCCAGCCACAG	NA	False	NA	NA	False	NA	NA	NA	71641710	71643744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_71641700_71643700
ES.690.2	chr1	+	3247	7	Antisense	novelGene_ENSMUSG00000026193.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAGCTGAA	NA	False	NA	NA	False	TTTAAA	-10	NA	71642026	71651859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_71644243_71645043_71645202_71645863_71646029_71647064_71647180_71648571_71648844_71650089_71650178_71651626
ES.6900.1	chr11	-	143	1	Intergenic	novelGene_5595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGAACAAGGC	NA	False	NA	NA	False	NA	NA	NA	117433327	117433184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117433200_117433300
ES.6901.1	chr11	+	2630	1	Intergenic	novelGene_5596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTTCTATCTGTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	117448676	117451306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117448700_117451300
ES.6902.1	chr11	-	203	1	Intergenic	novelGene_5597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAGAGAACCCATACTT	NA	False	NA	NA	False	NA	NA	NA	117473970	117473767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117473800_117474000
ES.6903.1	chr11	-	263	1	Intergenic	novelGene_5598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCTGCTTTGTGTCA	NA	False	NA	NA	False	NA	NA	NA	117475813	117475550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117475600_117475800
ES.6904.1	chr11	+	5871	1	Intergenic	novelGene_5599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117476364	117482235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117476400_117482200
ES.6904.2	chr11	+	1102	1	Intergenic	novelGene_5600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAAATAATGGTTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	117480930	117482032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117480900_117482000
ES.6905.1	chr11	+	188	1	Intergenic	novelGene_5601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTATTAGCCA	NA	False	NA	NA	False	NA	NA	NA	117484921	117485109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117484900_117485100
ES.6906.1	chr11	+	1518	1	NIC	ENSMUSG00000054418.7	novel	1784	2	NA	NA	33	-1060	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTCTCAGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	117502105	117503623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117502100_117503600
ES.6906.2	chr11	+	624	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	100	1060	100	-1060	multi-exon	FALSE	canonical	3	27	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTCTCAGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	117502172	117503623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117502261_117503087
ES.6906.3	chr11	+	1085	2	NNC	ENSMUSG00000054418.7	novel	1784	2	NA	NA	131	-1061	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCGGTCTCAGAGCTTT	NA	False	NA	NA	False	NA	NA	NA	117502203	117503622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117502261_117502594
ES.6907.1	chr11	+	158	1	Intergenic	novelGene_5602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	117513185	117513343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117513200_117513300
ES.6908.1	chr11	-	222	1	Intergenic	novelGene_5603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCATGTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	117521468	117521246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117521200_117521500
ES.6909.1	chr11	+	184	1	Intergenic	novelGene_5604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGACAGGGAGGCT	8192	False	NA	NA	False	NA	NA	NA	117531727	117531911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117531700_117531900
ES.691.1	chr1	+	2795	18	Antisense	novelGene_ENSMUSG00000026193.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71666321	71691366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_71666516_71667214_71667306_71667566_71667696_71668474_71668651_71668823_71669003_71671199_71671321_71676409_71676555_71677615_71677747_71679452_71679607_71680313_71680488_71681110_71681291_71682118_71682310_71684704_71684862_71687167_71687306_71688352_71688485_71689720_71689861_71690679_71690809_71691132
ES.691.2	chr1	+	3155	1	Antisense	novelGene_ENSMUSG00000026193.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71688213	71691368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_71688200_71691400
ES.691.3	chr1	+	648	2	NNC	ENSMUSG00000073652.11	novel	826	3	NA	NA	-1853	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACTTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	71690142	71696452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_71690542_71696203
ES.691.4	chr1	+	1690	5	NNC	ENSMUSG00000073652.11	novel	826	3	NA	NA	-23	86961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.29903810567666	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	71692023	71788963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_71692179_71723721_71723914_71731870_71732006_71772037_71772167_71787884
ES.691.5	chr1	+	4565	1	NIC	ENSMUSG00000073652.11	novel	826	3	NA	NA	-8	-13	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACTATTGTGATAGAGG	NA	False	NA	NA	False	AGTAAA	-15	NA	71692038	71696603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71692000_71696600
ES.691.6	chr1	+	1183	3	NIC	ENSMUSG00000073652.11	novel	1193	4	NA	NA	-105	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGTTGCTACTCATG	NA	False	NA	NA	False	AATAAA	-20	NA	71692388	71702009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_71692546_71699910_71700105_71701177
ES.691.7	chr1	+	441	2	ISM	ENSMUSG00000073652.11	ENSMUST00000097699.3	826	3	522	0	20	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGGTGTCAGTAGTCAT	NA	False	NA	NA	False	AGTAAA	-28	NA	71692517	71696616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_71692546_71696203
ES.691.8	chr1	+	4650	3	Antisense	novelGene_ENSMUSG00000101834.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCCCCCCTGTTAAAAA	7528	False	NA	NA	False	AATAAA	-16	NA	71721697	71751234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_71723914_71731870_71732006_71748935
ES.691.9	chr1	+	3018	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAAAAACCCAGTCCCC	NA	False	NA	NA	False	NA	NA	NA	71763982	71767000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71764000_71767000
ES.6910.1	chr11	-	179	1	Intergenic	novelGene_5605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAGCATCAAAATT	NA	False	NA	-3	True	NA	NA	NA	117541398	117541219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117541200_117541400
ES.6911.1	chr11	+	7364	21	NNC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	-52	-208	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.97638489038	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTGAACTGTGGCCAT	NA	False	NA	NA	False	TATAAA	-20	NA	117545062	117652882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117545513_117591550_117591666_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.10	chr11	+	7511	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-72	-209	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTGAACTGTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	117545566	117652881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.11	chr11	+	7248	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-70	-320	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTCTGTCTACTTCA	NA	False	NA	101	True	TTTAAA	-26	NA	117545568	117652770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.12	chr11	+	8203	21	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-69	493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6797402359226	358	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTTTTGATTGTTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	117545569	117653583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591666_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.13	chr11	+	4456	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-66	39068	-66	-24930	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTTTGGATTCTGTG	NA	False	NA	NA	False	NA	NA	NA	117545572	117615197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.14	chr11	+	6882	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-66	-832	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGAACCCAGCAGGCCA	NA	False	NA	NA	False	AAAAAG	-19	NA	117545572	117652258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.15	chr11	+	4249	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-57	39266	-57	-25128	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	GATAAA	-16	NA	117545581	117614999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.16	chr11	+	3473	4	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-56	-25896	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.5580467734555	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAATCCAGTCATCCA	NA	False	NA	NA	False	AATAAA	-19	NA	117545582	117614231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591666_117604951_117605279_117611775
ES.6911.17	chr11	+	3485	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-56	40029	-56	-25891	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCCAGTCATCCAGAGCA	NA	False	NA	NA	False	AATAAA	-24	NA	117545582	117614236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.18	chr11	+	7722	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-55	19	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545583	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.19	chr11	+	5122	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-51	38387	-51	-24249	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTGCTCTTCCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	117545587	117615878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.2	chr11	+	6490	22	NNC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	-51	-819	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.0316471622769	352	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCAATACCGAAATGTG	NA	False	NA	NA	False	AAAAAG	-32	NA	117545063	117652271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117545244_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.20	chr11	+	1548	3	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-49	60181	-49	-46043	5prime_fragment	FALSE	canonical	3	99	junction_2	4.5	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATGGAACTCTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	117545589	117594084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204
ES.6911.21	chr11	+	6946	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-49	-406	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	30.8784589054689	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGCTGGTGACAATTCA	NA	False	NA	15	True	AGTAAA	-14	NA	117545589	117652684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117649729_117649801_117650449_117650590_117651316
ES.6911.22	chr11	+	7721	19	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-47	321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.2998911674048	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117545591	117653411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591666_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.23	chr11	+	4742	19	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.0822432345843	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAATAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	117545594	117653090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.24	chr11	+	6187	22	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.0660865711538	359	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117545594	117654254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605119_117614284_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.25	chr11	+	7330	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-41	-209	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTGAACTGTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	117545597	117652881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.26	chr11	+	7538	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-21	19	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545617	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.27	chr11	+	6383	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-16	-1131	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGGGCACTTTTCAGAT	NA	False	NA	15	True	TATAAA	-23	NA	117545622	117651959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.28	chr11	+	7330	21	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-14	-324	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6797402359226	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATGTGTCTGTCTAC	NA	False	NA	97	True	TTTAAA	-22	NA	117545624	117652766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591662_117604948_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.29	chr11	+	8117	23	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-14	299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	34.4591026009981	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	117545624	117653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649260_117649417_117649729_117649801_117650449_117650590_117651316
ES.6911.3	chr11	+	7281	19	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-118	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	29.4767118792086	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545520	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.30	chr11	+	7845	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-10	337	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	117545628	117653427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.31	chr11	+	6518	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-9	-1139	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTATCATGAAGGGCACT	NA	False	NA	7	True	TATAAA	-15	NA	117545629	117651951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.32	chr11	+	8828	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGCTGTGTCTTTCATC	NA	False	NA	15	True	AATAAA	-26	NA	117545630	117654262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.33	chr11	+	5043	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-2	321	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	28.3769638538433	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117545636	117653411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.34	chr11	+	9100	1	Genic_Genomic	ENSMUSG00000025571.14	novel	NA	NA	NA	NA	-2	-85391	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAAGGTAGTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	117545636	117554736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_117545600_117554700
ES.6911.35	chr11	+	4232	17	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-2	-218	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33.7420708278256	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAACTCTTGTTGAA	NA	False	NA	NA	False	TATAAA	-10	NA	117545636	117652872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.36	chr11	+	7286	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-2	-364	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTGTTGCATTTAAAG	NA	False	NA	57	True	NA	NA	NA	117545636	117652726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.37	chr11	+	8004	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-2	354	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACACACACACACAAAGA	NA	False	NA	NA	False	NA	NA	NA	117545636	117653444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.38	chr11	+	4971	14	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-2	4131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	33.7856101857181	329	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGCTGTTCCCCATAGCT	NA	False	NA	NA	False	NA	NA	NA	117545636	117646265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156
ES.6911.39	chr11	+	9254	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	0	34204	0	-20066	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGCTTTTCTTTGACC	NA	False	NA	NA	False	AATAAA	-18	NA	117545638	117620061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.4	chr11	+	4274	5	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-89	-25128	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.0589094281735	264	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	GATAAA	-16	NA	117545549	117614999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591644_117593204_117593227_117604951_117605279_117611775
ES.6911.42	chr11	+	7773	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	299	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.6010880982651	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	117545640	117653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.43	chr11	+	7641	21	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	486	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	28.6646123294909	358	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGATCAATGTTTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	117545640	117653576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650556_117651623
ES.6911.44	chr11	+	4496	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	-222	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	28.3769638538433	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAAACAAACTCTTGT	NA	False	NA	NA	False	TATAAA	-6	NA	117545640	117652868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.45	chr11	+	8802	21	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6797402359226	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117545640	117654254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591662_117604948_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.46	chr11	+	8667	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCTGTGTCTTTCAT	NA	False	NA	14	True	AATAAA	-25	NA	117545640	117654261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.47	chr11	+	7590	23	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	27.4208477724884	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	117545640	117653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316_117651407_117651761
ES.6911.48	chr11	+	6209	18	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	-5415	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	14.4997315331309	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCTGGTACCGCT	NA	False	NA	NA	False	NA	NA	NA	117545640	117647675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788
ES.6911.5	chr11	+	4266	4	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-87	-25132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	49.5580467734555	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCCTGGCTTTTCTTTA	NA	False	NA	NA	False	GATAAA	-12	NA	117545551	117614995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591662_117604949_117605279_117611775
ES.6911.50	chr11	+	7982	23	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	5304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	27.4208477724884	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGGCACACAGGAGGC	NA	False	NA	NA	False	NA	NA	NA	117545640	117659569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316_117653413_117659555
ES.6911.51	chr11	+	3209	5	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	-31055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.629118716747	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTAACTTTCCTACCTG	NA	False	NA	NA	False	AATAAA	-13	NA	117545640	117609072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117606829
ES.6911.52	chr11	+	4579	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	2	38877	2	-24739	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	264	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCACTTGTGTGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	117545640	117615388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.53	chr11	+	5187	17	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	2	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	28.2349932486268	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545640	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643870_117652951
ES.6911.54	chr11	+	556	2	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	4	62674	4	-48536	5prime_fragment	FALSE	canonical	3	108	junction_1	0	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	117545642	117591591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550
ES.6911.55	chr11	+	4151	18	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	4	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.7669763707979	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGGGCTGGTGACAATT	NA	False	NA	13	True	AGTAAA	-12	NA	117545642	117652682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591662_117622989_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.56	chr11	+	3852	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	6	-862	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	28.3769638538433	352	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACATATCA	NA	False	NA	NA	False	TTTAAA	-5	NA	117545644	117652228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.57	chr11	+	7657	21	NNC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	6	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6797402359226	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545644	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117546158_117591550_117591666_117604948_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.58	chr11	+	4255	7	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	6	-10658	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.8314977528279	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGTGGTTGTAATTCT	NA	False	NA	NA	False	NA	NA	NA	117545644	117629469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116
ES.6911.59	chr11	+	5398	14	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	6	978	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	29.8598303319966	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGTTGTTTATCCTC	NA	False	NA	NA	False	NA	NA	NA	117545644	117641105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402
ES.6911.6	chr11	+	7014	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-87	-403	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	30.5629544191245	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGTGACAATTCATGT	NA	False	NA	18	True	AGTAAA	-17	NA	117545551	117652687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.61	chr11	+	4879	19	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	12	321	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	30.9709641000075	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117545650	117653411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.62	chr11	+	1332	1	Intergenic	novelGene_5607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117583062	117584394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117583100_117584400
ES.6911.63	chr11	+	8045	19	NIC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	-18641	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_8	20.6827894099848	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117593202	117654254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.64	chr11	+	5633	2	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	59407	37090	-6798	-22952	internal_fragment	FALSE	canonical	3	102	junction_1	0	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTAAGAAATTATCG	NA	False	NA	NA	False	ACTAAA	-20	NA	117605045	117617175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117605279_117611775
ES.6911.65	chr11	+	7120	18	NIC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	-6749	337	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	30.9954790765265	344	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	117605094	117653427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.66	chr11	+	9940	1	NIC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	73	-18271	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTAAAAATACTTGTTT	NA	False	NA	NA	False	AAAAAG	-37	NA	117611916	117621856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117611900_117621900
ES.6911.67	chr11	+	6051	1	NIC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	265	-21968	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGAACATCTAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	117612108	117618159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117612100_117618200
ES.6911.68	chr11	+	4276	10	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	750	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9985754725591	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAATAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	117612593	117653090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117613861_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.69	chr11	+	5077	18	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	1135	-402	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	29.1691167202954	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGTGACAATTCATGTG	NA	False	NA	19	True	AGTAAA	-18	NA	117612978	117652688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650592_117651316
ES.6911.7	chr11	+	3983	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	-84	39559	-84	-25421	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTATAGTTTTTGTCT	NA	False	NA	NA	False	NA	NA	NA	117545554	117614706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
ES.6911.70	chr11	+	3561	9	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	1234	299	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.0906011150969	342	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	117613077	117653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117613619_117640606_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.71	chr11	+	9159	17	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	1379	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	33.3662792913744	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAATAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	117613222	117653090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117618453_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.72	chr11	+	4563	18	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	1425	-404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.8524013858441	341	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGGTGACAATTCATG	NA	False	NA	17	True	AGTAAA	-16	NA	117613268	117652686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640501_117640570_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.73	chr11	+	4825	17	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	1620	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.8267645511657	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGTTAAAAGGAATAA	NA	False	NA	NA	False	AATAAA	-17	NA	117613463	117653081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117614377_117622993_117623196_117624432_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.74	chr11	+	7801	18	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	2025	-862	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	30.5400072285927	337	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGACATATCA	NA	False	NA	NA	False	TTTAAA	-5	NA	117613868	117652228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117618453_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.75	chr11	+	4180	17	NIC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	2256	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	31.7389252338513	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117614099	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117649729_117649801_117650449_117650590_117651316
ES.6911.76	chr11	+	6475	18	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	2319	-224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9297675230698	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAAAACAAACTCTT	NA	False	NA	NA	False	TATAAA	-4	NA	117614162	117652866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117616783_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.77	chr11	+	6953	18	NNC	ENSMUSG00000025571.14	novel	742	3	NA	NA	3754	19	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	30.5400072285927	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117615597	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117618453_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.78	chr11	+	8093	1	NIC	ENSMUSG00000025571.14	novel	8724	22	NA	NA	5119	-15072	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCAAAAGCTATTTTGAA	NA	False	NA	NA	False	NA	NA	NA	117616962	117625055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117617000_117625100
ES.6911.79	chr11	+	5537	17	ISM	ENSMUSG00000025571.14	ENSMUST00000138299.2	6612	18	10856	-1164	-10627	0	3prime_fragment	FALSE	canonical	3	68	junction_5	17.7525306294624	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117622699	117654254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.8	chr11	+	4818	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-79	19	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	28.3769638538433	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCATCATTTAAAACA	NA	False	NA	NA	False	AATAAA	-45	NA	117545559	117653109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.80	chr11	+	5788	11	NIC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	-1796	299	intron_retention	FALSE	canonical	3	91	junction_3	15.5528132503416	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-29	NA	117631530	117653389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.81	chr11	+	6836	7	NIC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	-2042	321	intron_retention	FALSE	canonical	3	91	junction_2	18.3998792266568	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117638014	117653411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117638123_117640069_117640154_117640402_117640644_117643802_117646933_117648762_117649801_117650449_117650590_117651316
ES.6911.82	chr11	+	4010	10	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	60	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	38.9985754725591	268	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGATGTAATTGCTGT	NA	False	NA	5	True	AATAAA	-16	NA	117640116	117654252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316_117653911_117654024
ES.6911.83	chr11	+	2953	6	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	5828	321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.8291255089048	265	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117645884	117653411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117646193_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.84	chr11	+	3939	5	NNC	ENSMUSG00000025571.14	novel	6612	18	NA	NA	6168	-1	intron_retention	FALSE	canonical	0	0	junction_1	56.3621104998739	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGATGTAATTGCTGTG	NA	False	NA	6	True	AATAAA	-17	NA	117646224	117654253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117646933_117648874_117648958_117649729_117649801_117650449_117650590_117651316
ES.6911.9	chr11	+	4434	19	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	-73	-209	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	30.9709641000075	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTGAACTGTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	117545565	117652881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ES.6912.1	chr11	-	207	1	Intergenic	novelGene_5606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117550774	117550567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117550600_117550800
ES.6913.1	chr11	-	172	1	Intergenic	novelGene_5608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATCTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	117593771	117593599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117593600_117593800
ES.6914.1	chr11	-	197	1	Intergenic	novelGene_5609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGCTAGATAGATAGG	NA	False	NA	NA	False	NA	NA	NA	117601137	117600940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117600900_117601100
ES.6915.1	chr11	-	174	1	Antisense	novelGene_ENSMUSG00000025571.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	117643256	117643082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_117643100_117643300
ES.6916.1	chr11	-	257	1	Intergenic	novelGene_5610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACCCTCAAGGAGACA	3415	False	NA	NA	False	NA	NA	NA	117651135	117650878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117650900_117651100
ES.6917.1	chr11	-	3058	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	4	intron_retention	TRUE	canonical	3	224	junction_8	42.3857942659514	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGCTTCAGGATGAGCT	NA	False	NA	0	True	ATTAAA	-19	NA	117671508	117656809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.10	chr11	-	2900	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	3	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671509	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.11	chr11	-	2898	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-12	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	97.1312616743952	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671496	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660103_117660214_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663770_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.12	chr11	-	6055	13	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-8	2	intron_retention	FALSE	canonical	1	1	junction_10	91.8768423851553	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671492	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117661371_117661516_117661613_117663498_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667082_117667170_117669069_117669229_117669530
ES.6917.13	chr11	-	4812	16	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	2	intron_retention	FALSE	canonical	1	8	junction_8	82.4473973714958	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671502	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663792_117663925_117664188_117664345_117665047_117665193_117665833_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.14	chr11	-	4392	17	ISM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-35	-2	-16	2	intron_retention	FALSE	canonical	3	224	junction_9	43.4977998725223	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671500	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530
ES.6917.15	chr11	-	2851	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	98	2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_19	74.8078609938955	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671349	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671261
ES.6917.16	chr11	-	2830	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-40	2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	76.5374918214661	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671524	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.17	chr11	-	4152	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_14	77.9965969501392	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671487	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666996_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.18	chr11	-	3010	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-31	2	intron_retention	FALSE	canonical	3	72	junction_8	64.4138097684719	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671515	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.2	chr11	-	2989	21	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-17	3	combination_of_known_junctions	FALSE	canonical	1	4	junction_20	92.1311022402316	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671501	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117670251_117670337_117671361
ES.6917.20	chr11	-	2863	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-21	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	97.080456109604	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671505	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659802_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666006_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.21	chr11	-	3932	17	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-156	2	intron_retention	FALSE	canonical	3	244	junction_7	36.7733238061234	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117670632	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.23	chr11	-	4780	17	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	1	2	intron_retention	FALSE	canonical	3	55	junction_7	68.3976196588741	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671464	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.24	chr11	-	2812	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	76.214560812081	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671491	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666495_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.25	chr11	-	1066	8	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	118.727607985503	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671508	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660039_117669554_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.26	chr11	-	3293	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-17	2	intron_retention	FALSE	canonical	3	224	junction_9	39.6456526970837	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671501	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.27	chr11	-	4132	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	2	intron_retention	FALSE	canonical	2	12	junction_17	88.2326470191165	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671502	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669623_117669758_117669875_117669988
ES.6917.28	chr11	-	3175	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_18	89.6225452510915	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671769	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671735
ES.6917.29	chr11	-	2878	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	95.8343157041464	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671497	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659802_117659931_117660109_117660214_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.3	chr11	-	3095	21	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-56	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_20	94.4211178709509	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117673080	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117672123_117672359_117672984
ES.6917.30	chr11	-	4173	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-22	2	intron_retention	FALSE	canonical	3	7	junction_13	91.4882438646196	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671506	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.32	chr11	-	3008	21	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.0337438117129	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671484	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117657596_117657719_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.33	chr11	-	2722	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	96.429338294684	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117673039	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117672984
ES.6917.34	chr11	-	4272	18	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	2	intron_retention	FALSE	canonical	1	5	junction_17	79.1203367135208	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGCTTCAGGATGAG	NA	False	NA	-2	True	ATTAAA	-17	NA	117671498	117656811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117671196_117671361
ES.6917.35	chr11	-	2691	18	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	102.059416848589	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117671502	117656812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669988_117670118_117671361
ES.6917.36	chr11	-	3816	18	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-10	1	intron_retention	FALSE	canonical	3	55	junction_7	68.521559762232	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117671494	117656812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.37	chr11	-	3750	21	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-41	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	109.586723648442	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117671525	117656812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666975_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117670369_117671196_117671361
ES.6917.39	chr11	-	4997	17	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	1	intron_retention	FALSE	canonical	3	224	junction_10	40.171069736192	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117671447	117656812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117664345_117665047_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.4	chr11	-	2927	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	111.917064663441	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671509	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669988_117670118_117671064_117671196_117671361
ES.6917.40	chr11	-	4175	4	NIC	ENSMUSG00000025572.19	novel	2798	19	NA	NA	1684	1	intron_retention	FALSE	canonical	3	266	junction_3	29.8923996285938	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGTGCTTCAGGATGA	NA	False	NA	-3	True	ATTAAA	-16	NA	117662185	117656812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117660109_117660218_117660353_117661294_117661371_117661516
ES.6917.41	chr11	-	2832	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_17	89.7430311185723	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671420	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669623_117669758_117669875_117669988_117670118_117671361
ES.6917.42	chr11	-	2975	21	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_20	100.691906328165	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671502	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117670251_117670337_117671361
ES.6917.44	chr11	-	2780	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_6	89.4483090952535	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671488	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.45	chr11	-	2846	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	76.2879441033278	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671498	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669823_117669988_117670118_117671361
ES.6917.46	chr11	-	2907	21	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	94.8300585257649	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117673047	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117672275_117672359_117672984
ES.6917.47	chr11	-	3590	18	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	95.236620271986	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671491	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659856_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.48	chr11	-	4641	17	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	0	intron_retention	FALSE	canonical	3	55	junction_6	85.2470444868912	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671498	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.49	chr11	-	4132	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-12	0	intron_retention	FALSE	canonical	3	55	junction_6	78.006271511089	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671496	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.5	chr11	-	2959	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	-91	-3	-72	3	multi-exon	FALSE	canonical	3	224	junction_9	41.6618095045227	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671556	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.50	chr11	-	4141	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-8	0	intron_retention	FALSE	canonical	3	7	junction_13	76.5354956785767	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671492	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.51	chr11	-	4803	17	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	0	intron_retention	FALSE	canonical	2	7	junction_3	114.296694506009	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671509	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659802_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.52	chr11	-	3161	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-8	0	intron_retention	FALSE	canonical	3	7	junction_12	76.6987050609376	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671492	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.54	chr11	-	3546	16	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	408	0	intron_retention	FALSE	canonical	2	7	junction_3	81.3201082143894	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117670066	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659802_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.56	chr11	-	5013	15	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_12	86.1449004732783	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671491	117656813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667168_117669069_117669229_117669530_117669875_117669988
ES.6917.57	chr11	-	3567	18	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	55	junction_7	67.4161275664463	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671498	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.59	chr11	-	2882	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	97.0296810402368	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671502	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669998_117670109_117671361
ES.6917.6	chr11	-	2853	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.6632193603385	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671522	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669623_117669758_117669875_117669988_117670118_117671361
ES.6917.61	chr11	-	3471	18	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	9	-1	intron_retention	FALSE	canonical	3	224	junction_9	39.5964068133202	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671475	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.62	chr11	-	4160	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	7	junction_13	101.272033115555	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671508	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.63	chr11	-	2855	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	90.2236986022724	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671460	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663792_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.64	chr11	-	4102	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_12	89.6225452510915	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671490	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666006_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.65	chr11	-	2757	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	76.214560812081	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671467	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663828_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.67	chr11	-	3005	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-13	-1	intron_retention	FALSE	canonical	1	4	junction_13	106.651658108467	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTTTGTGCTTCAGGAT	NA	False	NA	-5	True	ATTAAA	-14	NA	117671497	117656814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666547_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670337_117671361
ES.6917.68	chr11	-	2776	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	79.1118913819199	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTGTGCTTCAGGA	NA	False	NA	-6	True	ATTAAA	-13	NA	117671498	117656815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669623_117669988_117670118_117671361
ES.6917.69	chr11	-	4259	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-14	-2	intron_retention	FALSE	canonical	1	5	junction_18	108.89077379321	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTGTGCTTCAGGA	NA	False	NA	-6	True	ATTAAA	-13	NA	117671498	117656815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117671196_117671361
ES.6917.7	chr11	-	4272	18	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-36	3	intron_retention	FALSE	canonical	3	224	junction_8	42.4731952923147	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671520	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988
ES.6917.70	chr11	-	3317	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	-2	intron_retention	FALSE	canonical	3	7	junction_12	92.3288038733924	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTGTGCTTCAGGA	NA	False	NA	-6	True	ATTAAA	-13	NA	117671508	117656815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.71	chr11	-	4029	17	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	7	junction_10	94.0323872064833	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTGTGCTTCAGGA	NA	False	NA	-6	True	ATTAAA	-13	NA	117671502	117656815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.72	chr11	-	4070	19	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	9	-3	intron_retention	FALSE	canonical	1	3	junction_18	121.212457596335	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTTGTGCTTCAGG	NA	False	NA	-7	True	ATTAAA	-12	NA	117670465	117656816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117658460_117659747_117659802_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117670369
ES.6917.73	chr11	-	2968	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	8	-3	intron_retention	FALSE	canonical	3	224	junction_9	42.7756492976963	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTTGTGCTTCAGG	NA	False	NA	-7	True	ATTAAA	-12	NA	117671457	117656816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117670118_117671361
ES.6917.74	chr11	-	2885	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	76.5922035912894	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTTGTGCTTCAGG	NA	False	NA	-7	True	ATTAAA	-12	NA	117671509	117656816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660336_117661298_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.75	chr11	-	4393	17	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	55	junction_7	86.1114829741075	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTTGTGCTTCAGG	NA	False	NA	-7	True	ATTAAA	-12	NA	117671502	117656816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661629_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530
ES.6917.8	chr11	-	2883	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-16	3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_8	75.6546681234163	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671500	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663792_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ES.6917.9	chr11	-	3901	18	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	-24	3	intron_retention	FALSE	canonical	0	0	junction_10	136.405867005907	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCTTCAGGATGAGC	NA	False	NA	-1	True	ATTAAA	-18	NA	117671508	117656810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117658460_117659747_117659802_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669988_117670118_117670251_117670337_117671361
ES.6918.1	chr11	+	3300	15	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	8	8	intron_retention	FALSE	canonical	2	3	junction_3	5.31507290636732	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTGAATTTCTTGGA	7622	False	NA	NA	False	NA	NA	NA	117673130	117683944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117674097_117674220_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
ES.6918.2	chr11	+	3212	12	NNC	ENSMUSG00000050106.19	novel	2736	16	NA	NA	-111	5	intron_retention	FALSE	canonical	0	0	junction_11	5.46665322849924	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATATATATATATGT	7864	False	NA	NA	False	NA	NA	NA	117673372	117683914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117674097_117674220_117674370_117674596_117674747_117674935_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117682185_117682268_117682428_117683366
ES.6918.3	chr11	+	2039	6	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	765	3890	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.42586398650022	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAAGTGAG	8740	False	NA	NA	False	NA	NA	NA	117674248	117678866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117674370_117674596_117674747_117675630_117675768_117675945_117676094_117677212_117677384_117677554
ES.6918.4	chr11	+	2408	13	NIC	ENSMUSG00000050106.19	novel	2577	16	NA	NA	784	2	intron_retention	FALSE	canonical	2	3	junction_2	5.37160745649444	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAATACTTGAATTT	8759	False	NA	NA	False	NA	NA	NA	117674267	117683938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117674370_117674596_117674747_117674938_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
ES.6918.5	chr11	+	1707	7	NIC	ENSMUSG00000050106.19	novel	2644	16	NA	NA	3987	8	intron_retention	FALSE	canonical	3	8	junction_5	5.02217305777312	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTGAATTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	117677470	117683944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117677695_117681041_117681166_117681508_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
ES.6919.1	chr11	+	1575	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	-51	-4	-51	4	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGGGTGGCGCCTCA	NA	False	NA	18	True	AATAAA	-18	NA	117700442	117705113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ES.6919.2	chr11	+	1429	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	-29	2	-1	-2	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700492	117705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ES.6919.4	chr11	+	4162	3	NIC	ENSMUSG00000048277.16	novel	1520	4	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	622	junction_2	37.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700504	117705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117703523_117703871_117704012_117704103
ES.6919.5	chr11	+	1585	3	ISM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	23	4	-2	-4	intron_retention	FALSE	canonical	3	588	junction_1	54.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTTGTGCTGGGTG	NA	False	NA	10	True	AATAAA	-10	NA	117700516	117705105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117700630_117703284_117703523_117703871
ES.6919.6	chr11	+	1349	3	FSM	ENSMUSG00000048277.16	ENSMUST00000175737.2	785	3	-15	-549	1	-2	multi-exon	FALSE	canonical	3	9	junction_2	289.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700522	117705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117700630_117703284_117703523_117704103
ES.6919.7	chr11	+	4582	1	NIC	ENSMUSG00000048277.16	novel	1520	4	NA	NA	4	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117700525	117705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117700500_117705100
ES.6919.8	chr11	+	1577	5	NNC	ENSMUSG00000048277.16	novel	1520	4	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	330.814430610274	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCGTGTTGTGCTGGGT	NA	False	NA	9	True	AATAAA	-9	NA	117700527	117705104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117700630_117702415_117702512_117703284_117703523_117703871_117704012_117704103
ES.6919.9	chr11	+	2853	2	ISM	ENSMUSG00000048277.16	ENSMUST00000175737.2	785	3	1136	-549	1136	-2	3prime_fragment	FALSE	canonical	3	9	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	False	NA	12	True	AATAAA	-12	NA	117701673	117705107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117703523_117704103
ES.692.1	chr1	-	8460	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	-137	-8	-112	4	multi-exon	TRUE	canonical	3	1514	junction_37	371.719226311845	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTCATTTCTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	71692471	71624674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.10	chr1	-	8157	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-82	1	intron_retention	FALSE	canonical	3	134	junction_13	462.096137608357	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692441	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.100	chr1	-	4476	24	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	4815	1	intron_retention	FALSE	canonical	0	0	junction_14	663.037402680646	2730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71658688	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644135_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542
ES.692.101	chr1	-	8107	22	NIC	ENSMUSG00000026193.16	novel	7965	45	NA	NA	4914	0	intron_retention	FALSE	canonical	3	235	junction_7	540.908725602672	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71658589	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71654711_71657737_71657825_71658542
ES.692.102	chr1	-	7541	43	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	2	14	junction_4	454.330698706183	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.105	chr1	-	8155	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_37	526.518666818437	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680604_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.107	chr1	-	6962	40	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	423	0	intron_retention	FALSE	non_canonical	0	0	junction_31	628.294802600148	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71691897	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668629_71680403_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.109	chr1	-	8273	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_36	471.48995040545	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677706_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.111	chr1	-	2783	14	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-1062	0	intron_retention	FALSE	canonical	2	9	junction_13	702.151267439477	2716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	9861	False	NA	-9	True	AATAAA	-15	NA	71643065	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641501_71642818
ES.692.112	chr1	-	7967	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	3	134	junction_13	520.083060654102	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.114	chr1	-	7694	44	FSM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	1	-1	1	0	multi-exon	FALSE	canonical	3	134	junction_13	572.029711943946	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.115	chr1	-	8156	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-82	0	intron_retention	FALSE	canonical	0	0	junction_43	479.653769126111	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692441	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71691990
ES.692.117	chr1	-	4216	3	NIC	ENSMUSG00000026193.16	novel	7410	44	NA	NA	225	0	intron_retention	FALSE	canonical	3	2714	junction_2	112	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	8558	False	NA	-9	True	AATAAA	-15	NA	71630005	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71629364_71629925
ES.692.119	chr1	-	8295	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_25	470.634598634757	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658691_71659879_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.12	chr1	-	8325	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_13	469.93028324541	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692330	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641666_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.126	chr1	-	7977	44	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_36	473.736602816403	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677740_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.127	chr1	-	8201	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_22	470.193023668124	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692327	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653087_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.128	chr1	-	8280	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	447.705786327484	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692325	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71626015_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.13	chr1	-	4332	22	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-5921	1	intron_retention	FALSE	canonical	0	0	junction_11	748.045447101782	2728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71654647	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639607_71641489_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646024_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518
ES.692.132	chr1	-	10519	44	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-18	0	intron_retention	FALSE	non_canonical	0	0	junction_20	477.450313136699	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692377	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653153_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.134	chr1	-	8000	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	467.351591841705	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625054_71625365_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.136	chr1	-	5344	28	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-1869	0	intron_retention	FALSE	non_canonical	0	0	junction_22	535.633130491486	2741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71665372	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654554_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132
ES.692.137	chr1	-	4495	23	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-5984	0	intron_retention	FALSE	non_canonical	0	0	junction_3	564.661743256545	2728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71654710	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629952_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518
ES.692.138	chr1	-	6714	40	NIC	ENSMUSG00000026193.16	novel	7680	45	NA	NA	2547	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	526.882989304215	2753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71689773	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720
ES.692.139	chr1	-	8857	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-77	0	intron_retention	FALSE	canonical	0	0	junction_22	550.04150505571	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692436	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653193_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690238_71690809_71691990
ES.692.14	chr1	-	8209	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-41	1	intron_retention	FALSE	canonical	1	46	junction_22	466.000400572074	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692400	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653018_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.142	chr1	-	7868	45	NNC	ENSMUSG00000026193.16	novel	7965	45	NA	NA	1	0	intron_retention	FALSE	canonical	2	12	junction_38	578.030273789665	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681195_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.143	chr1	-	8159	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	467.351591841705	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625066_71625218_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.144	chr1	-	8288	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_40	469.570875282508	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692363	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684762_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.145	chr1	-	8267	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_40	469.570875282508	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684750_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.146	chr1	-	7983	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	523.598359880105	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71624719_71624774_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.147	chr1	-	6017	31	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_29	522.353627557254	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666520_71690742_71690809_71691990
ES.692.15	chr1	-	8247	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-60	1	intron_retention	FALSE	canonical	0	0	junction_46	467.351591841705	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692419	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990_71692213_71692370
ES.692.151	chr1	-	8076	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	467.351591841705	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692331	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71636783_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.153	chr1	-	5349	28	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-1852	0	intron_retention	FALSE	non_canonical	0	0	junction_25	536.647966343413	2741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71665355	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659897_71659979_71663236_71663504_71665132
ES.692.154	chr1	-	7268	40	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-1714	0	intron_retention	FALSE	canonical	0	0	junction_8	579.417213838446	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71682161	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637757_71638373_71638554_71638761_71638852_71639444_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118
ES.692.156	chr1	-	8318	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	471.832710467033	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639442_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.159	chr1	-	8425	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-93	0	intron_retention	FALSE	non_canonical	0	0	junction_21	470.32604713888	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692452	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651801_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.162	chr1	-	6755	39	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	70	0	intron_retention	FALSE	non_canonical	0	0	junction_1	492.199864253528	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71680377	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71624811_71624852_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310
ES.692.164	chr1	-	4197	12	ISM	ENSMUSG00000026193.16	ENSMUST00000185408.7	4022	17	6191	-3	-532	0	3prime_fragment	FALSE	canonical	3	2104	junction_9	263.952976027396	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	9642	False	NA	-9	True	AATAAA	-15	NA	71642535	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468
ES.692.165	chr1	-	3581	19	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	355	0	intron_retention	FALSE	canonical	0	0	junction_18	602.786607718224	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	4848	False	NA	-9	True	AATAAA	-15	NA	71648371	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648304
ES.692.166	chr1	-	5048	27	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-1818	0	intron_retention	FALSE	canonical	0	0	junction_10	637.017027862664	2741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71665321	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638844_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132
ES.692.169	chr1	-	7522	43	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2492	0	intron_retention	FALSE	non_canonical	0	0	junction_40	479.526306916464	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71689828	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682252_71687243_71687306_71688352_71688485_71689720
ES.692.17	chr1	-	10246	43	NIC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	0	1	intron_retention	FALSE	canonical	3	355	junction_19	448.799689800055	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.170	chr1	-	8318	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_1	447.705786327484	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625982_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.171	chr1	-	5766	34	NIC	ENSMUSG00000026193.16	novel	7680	45	NA	NA	-7807	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_7	569.588476129545	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71671310	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71636800_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199
ES.692.172	chr1	-	3788	21	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-1421	0	intron_retention	FALSE	non_canonical	0	0	junction_1	577.997742210123	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	3072	False	NA	-9	True	AATAAA	-15	NA	71650147	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71624800_71624855_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087
ES.692.174	chr1	-	8058	47	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	3	99	junction_7	458.579297523561	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692330	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71636800_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.176	chr1	-	3273	17	NIC	ENSMUSG00000026193.16	novel	7797	44	NA	NA	-39	0	intron_retention	FALSE	canonical	3	17	junction_4	802.99042646846	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	4454	False	NA	-9	True	AATAAA	-15	NA	71648765	71624681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571
ES.692.18	chr1	-	7828	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	403	1	intron_retention	FALSE	canonical	3	37	junction_44	525.931697871925	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71691917	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.180	chr1	-	3782	21	NNC	ENSMUSG00000026193.16	novel	7694	44	NA	NA	-4302	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	590.48038917478	2752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71684749	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630032_71658561_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705
ES.692.181	chr1	-	8320	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_38	468.836477323529	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692330	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680497_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.182	chr1	-	8031	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_13	553.804376282892	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692330	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641651_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691994
ES.692.183	chr1	-	5414	1	NIC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	134	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2703	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	8467	False	NA	-10	True	AATAAA	-14	NA	71630096	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71624700_71630100
ES.692.185	chr1	-	3813	21	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	3892	0	intron_retention	FALSE	non_canonical	0	0	junction_17	616.404258583602	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71688428	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71645930_71682166_71682311_71684705_71684862_71687167_71687306_71688352
ES.692.188	chr1	-	7463	44	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	539.037398951967	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71691890	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.19	chr1	-	8186	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	1	64	junction_7	461.648068888527	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692330	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636672_71636800_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.190	chr1	-	7764	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	27	0	intron_retention	FALSE	canonical	3	17	junction_4	575.389826706315	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692293	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.195	chr1	-	8014	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_10	599.238964237415	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692330	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638844_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646045_71647096_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.196	chr1	-	7314	41	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-4755	0	intron_retention	FALSE	canonical	1	1	junction_40	547.700191140189	2752	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71685202	71624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71685049
ES.692.2	chr1	-	10628	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-81	1	intron_retention	FALSE	canonical	3	1514	junction_35	376.877721094857	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692440	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.20	chr1	-	6691	21	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	37891	0	-5714	0	3prime_fragment	FALSE	canonical	3	1921	junction_19	277.593637355037	2727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71654440	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626
ES.692.200	chr1	-	5484	29	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_28	533.782558869303	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71692330	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665270_71692121
ES.692.202	chr1	-	9336	28	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-4177	-1	intron_retention	FALSE	canonical	3	1634	junction_19	356.465205977669	2742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71667680	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566
ES.692.203	chr1	-	4886	27	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-1663	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	727.515306168921	2741	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71665166	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629266_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646024_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132
ES.692.208	chr1	-	4966	2	ISM	ENSMUSG00000026193.16	ENSMUST00000185408.7	4022	17	18531	-1	35	-1	intron_retention	FALSE	canonical	3	2938	junction_1	0	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	8368	False	NA	-11	True	AATAAA	-13	NA	71630195	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71625443_71625988
ES.692.21	chr1	-	9033	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	3	1514	junction_36	375.408826734378	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692330	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.211	chr1	-	8304	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_16	471.624078171493	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71692330	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645194_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.212	chr1	-	7622	44	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1602	-1	intron_retention	FALSE	non_canonical	0	0	junction_38	476.611822805144	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71690718	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680463_71682171_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679
ES.692.213	chr1	-	5611	32	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	5060	-1	intron_retention	FALSE	non_canonical	0	0	junction_20	547.014719196559	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71687260	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650138_71667617_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167
ES.692.214	chr1	-	8387	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-23	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	472.512085677299	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71692382	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654705_71657706_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.216	chr1	-	8248	47	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	467.351591841705	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71692330	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625054_71625115_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.217	chr1	-	8274	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	469.381181273103	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGATGTGGACGTCATTT	NA	False	NA	-11	True	AATAAA	-13	NA	71692330	71624683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640409_71641465_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.219	chr1	-	6658	38	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	94	0	intron_retention	FALSE	non_canonical	0	0	junction_31	495.280618600639	2748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71680353	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667665_71668555_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310
ES.692.220	chr1	-	7785	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	442	0	intron_retention	FALSE	canonical	3	37	junction_44	540.816742976279	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71691878	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.221	chr1	-	7575	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2250	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	544.40741297456	2754	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71690070	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71689975
ES.692.222	chr1	-	7979	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_21	473.176125959125	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71692330	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651813_71654578_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.223	chr1	-	7858	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1606	0	intron_retention	FALSE	non_canonical	0	0	junction_15	476.488290421801	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71690714	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644226_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679
ES.692.226	chr1	-	8315	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_33	471.088725883268	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATGTGGACGTCATT	NA	False	NA	-12	True	AATAAA	-12	NA	71692330	71624684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669009_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.229	chr1	-	5691	35	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2736	-4	intron_retention	FALSE	non_canonical	0	0	junction_1	457.830706574333	2748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	False	NA	-16	True	AATAAA	-8	NA	71677711	71624688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71624769_71629314_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615
ES.692.23	chr1	-	8312	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	471.832710467033	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692331	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638844_71639444_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.230	chr1	-	8207	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	105	0	-103	multi-exon	FALSE	canonical	3	1514	junction_37	371.719226311845	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGGAATTCAGTATAAT	NA	False	NA	-115	True	NA	NA	NA	71692331	71624787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.231	chr1	-	7310	42	NNC	ENSMUSG00000026193.16	novel	2778	12	NA	NA	1	-3143	intron_retention	FALSE	canonical	1	1	junction_1	393.336951186069	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCAGCGAAGGCCTGAA	NA	False	NA	NA	False	AATAAA	-39	NA	71692330	71632398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71632670_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.232	chr1	-	4185	11	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	46301	7738	2696	-3165	internal_fragment	FALSE	canonical	3	134	junction_8	828.736387520181	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTCTCCTTCTTTTCT	7189	False	NA	NA	False	AATAAA	-17	NA	71646030	71632420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861
ES.692.233	chr1	-	3660	8	ISM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	50838	7739	39	-3166	internal_fragment	FALSE	canonical	3	2104	junction_5	108.740094552402	2596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTCTCCTTCTTTTC	9107	False	NA	NA	False	AATAAA	-16	NA	71641496	71632421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468
ES.692.234	chr1	-	7428	32	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1205	intron_retention	FALSE	canonical	3	1514	junction_23	176.557054065451	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAATAGTCTGTGAAATT	NA	False	NA	NA	False	AATAAA	-32	NA	71692330	71642050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.235	chr1	-	6224	32	ISM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	18573	0	0	5prime_fragment	FALSE	canonical	3	1514	junction_23	176.557054065451	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTTTAAGCAGATGTCAA	NA	False	NA	NA	False	NA	NA	NA	71692331	71643255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.236	chr1	-	4773	26	ISM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	3	26610	0	-8037	5prime_fragment	FALSE	canonical	3	1514	junction_17	108.696274085177	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGTTTATTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	71692331	71651292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.237	chr1	-	4720	24	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	1	29098	1	-10525	5prime_fragment	FALSE	canonical	3	1514	junction_15	111.259535816122	2076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGCTCAGGGCTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	71692330	71653780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.238	chr1	-	4009	24	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	1	29809	1	-11236	5prime_fragment	FALSE	canonical	3	1514	junction_15	111.259535816122	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGCAGTTTTGAGTAG	NA	False	NA	NA	False	AATAGA	-20	NA	71692330	71654491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.239	chr1	-	2563	14	NNC	ENSMUSG00000026193.16	novel	1350	7	NA	NA	-33	-11914	intron_retention	FALSE	non_canonical	0	0	junction_1	446.75386708061	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATTTCCTAGCTCTCC	NA	False	NA	NA	False	NA	NA	NA	71692392	71655169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71655178_71670836_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.240	chr1	-	745	3	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	27064	34953	-1764	8980	internal_fragment	FALSE	canonical	3	1720	junction_2	14.5	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGTTGCTCTAAAT	NA	False	NA	NA	False	AATAAA	-18	NA	71665267	71659635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71659979_71663236_71663504_71665132
ES.692.241	chr1	-	3303	20	ISM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	-22	38741	-22	5192	5prime_fragment	FALSE	canonical	3	1514	junction_11	100.79176855983	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGCAGGCTACCGACT	NA	False	NA	NA	False	AATGAA	-43	NA	71692381	71663423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.242	chr1	-	4240	19	NNC	ENSMUSG00000026193.16	novel	7410	44	NA	NA	453	4816	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_18	389.703230708563	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGACTATAATTTCCAA	NA	False	NA	NA	False	AAAAAG	-16	NA	71691867	71663799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.243	chr1	-	4504	19	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	0	39119	0	4814	5prime_fragment	FALSE	canonical	3	1514	junction_10	103.214582303084	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTGACTATAATTTCC	NA	False	NA	NA	False	AAAAAG	-14	NA	71692331	71663801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.244	chr1	-	3233	17	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	5	42000	5	1933	5prime_fragment	FALSE	canonical	3	1514	junction_8	89.4979050034134	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTATTTCTGTGCCC	NA	False	NA	NA	False	ATTAAA	-15	NA	71692326	71666682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.245	chr1	-	3536	13	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	1	45111	1	-1178	5prime_fragment	FALSE	canonical	3	1514	junction_4	85.1020221068023	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGGCATTAACCATGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71692330	71669793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.246	chr1	-	2542	13	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	1	46105	1	-2172	5prime_fragment	FALSE	canonical	3	1514	junction_4	85.1020221068023	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTCCTGTAGTC	NA	False	NA	NA	False	AATGAA	-18	NA	71692330	71670787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.247	chr1	-	2104	6	FSM	ENSMUSG00000026193.16	ENSMUST00000186879.2	2104	6	1	-1	1	1	multi-exon	FALSE	canonical	3	1526	junction_1	85.5967289094624	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71692330	71683634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.25	chr1	-	7915	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	450	0	intron_retention	FALSE	canonical	2	4	junction_43	553.007940757926	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71691870	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71690679_71690809_71691792
ES.692.26	chr1	-	13019	42	NIC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-37	0	intron_retention	FALSE	canonical	3	1514	junction_33	378.279224808177	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692396	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.27	chr1	-	2619	15	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-931	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_7	675.203461399388	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	9992	False	NA	-6	True	AATAAA	-18	NA	71642934	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636609_71636800_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818
ES.692.32	chr1	-	7984	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	505.975330548799	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692330	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625385_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.33	chr1	-	5406	9	NIC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-31	0	intron_retention	FALSE	canonical	3	2104	junction_8	278.081344888506	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	9743	False	NA	-6	True	AATAAA	-18	NA	71639558	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71634962_71636439_71637623_71638373_71638554_71638761_71638852_71639448
ES.692.34	chr1	-	8125	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	378	0	intron_retention	FALSE	canonical	3	37	junction_45	468.371306751016	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71691942	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691792
ES.692.35	chr1	-	9424	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-40	0	intron_retention	FALSE	canonical	3	1514	junction_36	375.151776447748	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692399	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.36	chr1	-	8308	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-60	0	intron_retention	FALSE	canonical	2	12	junction_39	469.549968941894	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692419	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681195_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.37	chr1	-	9638	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2	0	intron_retention	FALSE	canonical	3	1514	junction_36	372.036440580536	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692329	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.39	chr1	-	13496	42	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	0	intron_retention	FALSE	canonical	3	1514	junction_33	375.312386245755	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692330	71624678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.4	chr1	-	8175	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	-131	-1	-103	1	multi-exon	FALSE	canonical	3	355	junction_21	441.858289425336	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692462	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.42	chr1	-	8336	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	466.767758362672	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGACGTCATTTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	71692331	71624679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636928_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.43	chr1	-	6577	36	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2711	-1	intron_retention	FALSE	non_canonical	0	0	junction_23	503.783761516136	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGACGTCATTTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	71677736	71624679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654717_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615
ES.692.44	chr1	-	8176	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	-1	intron_retention	FALSE	canonical	2	4	junction_43	474.694061436216	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGACGTCATTTCTTT	NA	False	NA	-7	True	AATAAA	-17	NA	71692330	71624679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71690679_71690809_71691990
ES.692.46	chr1	-	3140	17	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-3200	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	637.602197690692	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGACGTCATTTCTTT	8016	False	NA	-7	True	AATAAA	-17	NA	71645203	71624679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71624792_71624889_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043
ES.692.47	chr1	-	10104	44	NNC	ENSMUSG00000026193.16	novel	7797	44	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_36	595.119020868481	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71636800_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680604_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.55	chr1	-	8331	46	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-64	1	intron_retention	FALSE	canonical	3	235	junction_7	446.060812994023	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692423	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.57	chr1	-	8289	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_4	464.201852646023	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630024_71632225_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.59	chr1	-	8218	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-41	1	intron_retention	FALSE	canonical	3	17	junction_4	457.544005019108	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692400	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.6	chr1	-	8042	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_43	528.880561904416	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692331	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689853_71690675_71690809_71691990
ES.692.61	chr1	-	4968	22	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	5702	1	intron_retention	FALSE	canonical	3	17	junction_3	546.809700053467	2730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71657801	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737
ES.692.63	chr1	-	7331	42	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	3945	1	intron_retention	FALSE	non_canonical	0	0	junction_18	545.484033183429	2753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71688375	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647187_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352
ES.692.64	chr1	-	8035	45	FSM	ENSMUSG00000026193.16	ENSMUST00000187938.7	7965	45	-69	-1	-41	1	multi-exon	FALSE	canonical	3	235	junction_7	505.24113791141	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692400	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.66	chr1	-	5860	32	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-5458	1	intron_retention	FALSE	canonical	0	0	junction_5	587.099650825991	2743	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71668961	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632386_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824
ES.692.68	chr1	-	5567	30	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_14	571.618543969447	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643079_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.7	chr1	-	7713	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188674.7	7680	45	-29	-4	-1	1	multi-exon	FALSE	canonical	3	95	junction_7	516.089688054027	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692360	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.70	chr1	-	7953	46	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	canonical	3	95	junction_7	458.194240982071	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.71	chr1	-	5884	32	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-4996	1	intron_retention	FALSE	canonical	0	0	junction_13	517.391468156888	2742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71668499	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641688_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474
ES.692.73	chr1	-	8074	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	1	intron_retention	FALSE	canonical	3	17	junction_4	514.281071653582	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692331	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.76	chr1	-	6549	37	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	843	1	intron_retention	FALSE	canonical	2	47	junction_22	489.592404171288	2748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71679604	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653012_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450
ES.692.77	chr1	-	11903	43	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-85	1	intron_retention	FALSE	canonical	3	1514	junction_34	376.148768785043	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692444	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.78	chr1	-	7658	44	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	2510	1	intron_retention	FALSE	canonical	0	0	junction_10	561.398843942031	2753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71689810	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639442_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653051_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720
ES.692.79	chr1	-	3647	3	FSM	ENSMUSG00000026193.16	ENSMUST00000186575.2	495	3	-1813	-1339	-1813	1	multi-exon	FALSE	canonical	3	2714	junction_2	102	2703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	9987	False	NA	-8	True	AATAAA	-16	NA	71632043	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71626103_71629256_71629364_71629925
ES.692.8	chr1	-	6990	5	NIC	ENSMUSG00000026193.16	novel	4022	17	NA	NA	2120	1	intron_retention	FALSE	canonical	3	2421	junction_4	208.017276926701	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	5694	False	NA	-5	True	AATAAA	-19	NA	71637407	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71634962_71636439
ES.692.80	chr1	-	7875	44	NIC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	1	1	intron_retention	FALSE	canonical	3	17	junction_4	515.918156899632	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.83	chr1	-	8035	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	-83	1	intron_retention	FALSE	non_canonical	0	0	junction_33	527.588974518098	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692442	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671325_71676530_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.89	chr1	-	6033	12	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-1005	1	intron_retention	FALSE	canonical	0	0	junction_6	758.676882190467	2716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	9918	False	NA	-8	True	AATAAA	-16	NA	71643008	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71634962_71636439_71637719_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818
ES.692.9	chr1	-	7826	44	FSM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	-24	-5	-24	1	multi-exon	FALSE	canonical	3	134	junction_13	520.876343765833	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACGTCATTTCTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	71692383	71624677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.90	chr1	-	7503	42	NIC	ENSMUSG00000026193.16	novel	7797	44	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_41	607.666717844745	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71691990
ES.692.91	chr1	-	7356	41	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_10	570.673792547021	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692331	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638844_71639444_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679593_71688452_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.94	chr1	-	7772	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1606	1	intron_retention	FALSE	canonical	1	2	junction_2	441.390500377714	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71690714	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679
ES.692.95	chr1	-	8300	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	non_canonical	0	0	junction_31	549.489253312722	2755	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667690_71668474_71668645_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.692.99	chr1	-	6459	36	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	1	1	intron_retention	FALSE	canonical	0	0	junction_4	466.277127021767	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGACGTCATTTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	71692330	71624680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ES.6920.1	chr11	+	2721	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	-394	0	-394	0	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117716355	117730734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ES.6920.10	chr11	+	2222	9	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	6349	3	0	-3	3prime_fragment	FALSE	canonical	3	36	junction_7	7.01338006955277	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGGGGTTTTCTGTTTG	NA	False	NA	12	True	NA	NA	NA	117723098	117730731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ES.6920.11	chr11	+	2240	8	NNC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.516960562234	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGGGGTTTTCTGTTT	NA	False	NA	11	True	NA	NA	NA	117723119	117730730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117723276_117723353_117723403_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726760_117727233_117727339_117729318
ES.6920.12	chr11	+	1351	1	NIC	ENSMUSG00000093485.2	novel	1780	3	NA	NA	22628	-6258	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117723121	117724472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117723100_117724500
ES.6920.13	chr11	+	2452	8	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	31	-2	intron_retention	FALSE	canonical	3	36	junction_6	7.4422950157892	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGGTTTTCTGTTTGT	NA	False	NA	13	True	NA	NA	NA	117723129	117730732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726408_117726491_117726634_117727233_117727339_117729318
ES.6920.15	chr11	+	4732	4	NNC	ENSMUSG00000093485.2	novel	1780	3	NA	NA	23184	4	intron_retention	FALSE	non_canonical	0	0	junction_1	23.2139804619735	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117723677	117730734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117724284_117724502_117725845_117725970_117727339_117729318
ES.6920.2	chr11	+	2764	11	NNC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	-313	-2	intron_retention	FALSE	canonical	0	0	junction_9	15.5254629560603	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGGGTTTTCTGTTTGT	NA	False	NA	13	True	NA	NA	NA	117716436	117730732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726760_117727233_117727339_117729318
ES.6920.3	chr11	+	4380	6	NNC	ENSMUSG00000017718.16	novel	1583	10	NA	NA	-185	-1	intron_retention	FALSE	canonical	0	0	junction_5	24.1031118322925	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGACAGGTGATAATCTT	NA	False	NA	NA	False	GATAAA	-20	NA	117716564	117728059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117716833_117723170_117725679_117725771_117725845_117725970_117726408_117726491_117726760_117727233
ES.6920.4	chr11	+	3280	6	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	-26	-4	intron_retention	FALSE	canonical	1	2	junction_1	18.7509999733348	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTGGGGTTTTCTGTTT	NA	False	NA	11	True	NA	NA	NA	117716723	117730730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117716833_117723170_117723403_117725592_117725679_117725771_117725845_117725970_117727339_117729318
ES.6920.5	chr11	+	1270	9	ISM	ENSMUSG00000017718.16	ENSMUST00000149668.2	1583	10	-33	946	17	764	5prime_fragment	FALSE	canonical	3	29	junction_1	8.44097150806707	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGGACCCCAGGACGGTC	NA	False	NA	NA	False	NA	NA	NA	117716766	117727114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491
ES.6920.6	chr11	+	792	3	NIC	ENSMUSG00000017718.16	novel	345	4	NA	NA	17	498	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	28	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGTAATAATTTG	NA	False	NA	NA	False	NA	NA	NA	117716766	117723974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117716833_117723170_117723276_117723353
ES.6920.7	chr11	+	5524	1	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	17	-1186	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTCTTCGATTCAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	117716766	117722290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117716800_117722300
ES.6920.8	chr11	+	2531	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	18	-222	18	222	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGGGCACTCCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	117716767	117730956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ES.6920.9	chr11	+	2637	2	ISM	ENSMUSG00000017718.16	ENSMUST00000139945.8	827	5	-1143	1742	-1143	1025	5prime_fragment	FALSE	canonical	3	58	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATGGAGTGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	117721786	117724501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117723276_117723353
ES.6921.1	chr11	-	1247	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	209	-16	-16	16	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117716709	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ES.6921.10	chr11	-	2807	3	NNC	ENSMUSG00000025574.14	novel	678	3	NA	NA	-1547	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	503.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTTTCTCCTTAGCCT	NA	False	NA	-16	True	ATTAAA	-17	NA	117709797	117706350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117707069_117707173_117707393_117707927
ES.6921.12	chr11	-	6959	4	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	12	1	intron_retention	FALSE	canonical	3	1007	junction_2	53.8165608546498	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTTTCTCCTTAGCCT	NA	False	NA	-16	True	ATTAAA	-17	NA	117716631	117706350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117707927_117713017_117715496
ES.6921.13	chr11	-	5588	7	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	386.72715044187	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716688	117706351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117706966_117707272_117707393_117707927_117712396_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ES.6921.14	chr11	-	6066	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	3	-1	intron_retention	FALSE	canonical	3	796	junction_4	117.761453795374	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTGTTTCTCCTTAGC	NA	False	NA	-18	True	ATTAAA	-15	NA	117716640	117706352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117707927_117713017_117715496_117715608_117716426_117716459_117716539
ES.6921.15	chr11	-	2026	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	7	-1	intron_retention	FALSE	canonical	3	985	junction_3	62.2369665070527	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTGTTTCTCCTTAGC	NA	False	NA	-18	True	ATTAAA	-15	NA	117716686	117706352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117716459_117716539
ES.6921.16	chr11	-	3676	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	796	junction_4	97.6270454331176	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGAACGTGTTTCTCCT	NA	False	NA	-22	True	ATTAAA	-11	NA	117716679	117706356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117715608_117716426_117716459_117716539
ES.6921.17	chr11	-	5673	2	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	396	2018	121	-1639	intron_retention	FALSE	canonical	3	1136	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTTGCTACTTAAT	NA	False	NA	NA	False	NA	NA	NA	117716522	117708369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_117713017_117715496
ES.6921.2	chr11	-	2126	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	230	-16	5	16	intron_retention	FALSE	canonical	3	985	junction_3	61.9732805328232	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117716688	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496
ES.6921.3	chr11	-	3501	2	NNC	ENSMUSG00000025574.14	novel	724	2	NA	NA	-1771	16	intron_retention	TRUE	non_canonical	0	0	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117710021	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117707042_117707226
ES.6921.4	chr11	-	1156	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	-15	16	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	399.354178643469	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117716708	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ES.6921.5	chr11	-	3067	2	FSM	ENSMUSG00000025574.14	ENSMUST00000141939.2	724	2	-2229	-114	-1459	16	multi-exon	FALSE	canonical	3	1095	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117709709	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_117706966_117707272
ES.6921.6	chr11	-	1564	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	-140	16	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGTTTCCCTAACTT	NA	False	NA	-1	True	ATTAAA	-32	NA	117717058	117706335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
ES.6921.7	chr11	-	4624	5	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	14	intron_retention	TRUE	non_canonical	0	0	junction_1	429.786793073031	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTGGGTTTCCCTAAC	NA	False	NA	-3	True	ATTAAA	-30	NA	117716673	117706337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117707055_117707245_117707393_117707927_117708018_117712922_117716459_117716539
ES.6921.8	chr11	-	7163	4	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	14	7	intron_retention	FALSE	non_canonical	0	0	junction_1	507.8479650009	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTTAGCCTGGGTTT	NA	False	NA	-10	True	ATTAAA	-23	NA	117716629	117706344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117707067_117707173_117707393_117707927_117713017_117715496
ES.6921.9	chr11	-	1189	6	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	94	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	425.922340339175	324	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGTTTCTCCTTAGCCT	NA	False	NA	-16	True	ATTAAA	-17	NA	117716824	117706350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716665
ES.6922.1	chr11	-	176	1	Intergenic	novelGene_5611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117728846	117728670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117728700_117728800
ES.6923.1	chr11	-	181	1	Intergenic	novelGene_5612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTTTTTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	117735128	117734947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117734900_117735100
ES.6924.1	chr11	+	1028	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	-58	-23	-58	12	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGGTTTGTTTGGTTT	NA	False	NA	52	True	AATAAA	-41	NA	117740018	117746581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ES.6924.10	chr11	+	619	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	72	256	4	-256	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTTTTGTGGCTTTG	NA	False	NA	NA	False	TTTAAA	-12	NA	117740148	117746302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ES.6924.11	chr11	+	874	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	982.309862857269	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGTCTGTCTTGGAG	NA	False	NA	34	True	AATAAA	-23	NA	117740148	117746563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117740288_117740585_117740690_117743488_117743607_117746050
ES.6924.2	chr11	+	3425	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	-91	0	-23	0	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740053	117746569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117740288_117740579_117740690_117743488
ES.6924.3	chr11	+	884	3	NIC	ENSMUSG00000017716.16	novel	947	4	NA	NA	-22	14	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	950.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGTTTGTTTGGTTTTT	NA	False	NA	54	True	AATAAA	-43	NA	117740054	117746583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117740288_117743488_117743607_117746050
ES.6924.4	chr11	+	3305	2	NIC	ENSMUSG00000017716.16	novel	3334	3	NA	NA	-20	4	intron_retention	FALSE	canonical	3	60	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGTCTGTCTTGGA	NA	False	NA	33	True	AATAAA	-22	NA	117740056	117746562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117740288_117743488
ES.6924.6	chr11	+	921	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	863.560973849302	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740125	117746558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117740288_117740579_117740713_117743488_117743607_117746050
ES.6924.8	chr11	+	1626	1	NIC	ENSMUSG00000017716.16	novel	947	4	NA	NA	-1	-4789	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGAGCTGGCTCAGAG	NA	False	NA	NA	False	NA	NA	NA	117740143	117741769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117740100_117741800
ES.6924.9	chr11	+	961	5	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	981.383334890093	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTGTCTGTCTTGGA	NA	False	NA	33	True	AATAAA	-22	NA	117740148	117746562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117744287_117744370_117746050
ES.6925.1	chr11	+	844	1	Intergenic	novelGene_5613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGCTGCCTTGGTTGTGG	NA	False	NA	NA	False	NA	NA	NA	117756943	117757787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117756900_117757800
ES.6926.1	chr11	-	1438	6	NNC	ENSMUSG00000017713.10	novel	1770	7	NA	NA	-3007	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.4	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGGTTACTTTTATGTC	7729	False	NA	NA	False	NA	NA	NA	117767314	117758773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117759569_117760185_117760379_117760496_117760635_117761260_117761447_117762429_117762514_117767272
ES.6926.2	chr11	-	1531	1	Genic_Genomic	ENSMUSG00000017713.10	novel	NA	NA	NA	NA	2430	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATACTGGTTACTTTTAT	NA	False	NA	NA	False	NA	NA	NA	117760307	117758776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_117758800_117760300
ES.6927.1	chr11	-	158	1	Intergenic	novelGene_5614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	5667	False	NA	NA	False	NA	NA	NA	117776546	117776388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117776400_117776500
ES.6928.1	chr11	-	181	1	Intergenic	novelGene_5615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTGAAATGGAT	3908	False	NA	NA	False	NA	NA	NA	117815215	117815034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117815000_117815200
ES.6929.1	chr11	-	278	1	Intergenic	novelGene_5616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATGAATGAATGAATG	5703	False	NA	NA	False	AATAAA	-17	NA	117822577	117822299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117822300_117822600
ES.693.1	chr1	-	257	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGCTCTCTCTCTTTT	8231	False	NA	NA	False	AATAAA	-16	NA	71722816	71722559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_71722600_71722800
ES.6930.1	chr11	-	2638	2	Intergenic	novelGene_5617	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGATTTATAA	NA	False	NA	NA	False	NA	NA	NA	117837926	117829812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117832253_117837728
ES.6931.1	chr11	+	214	1	Intergenic	novelGene_5618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAAACAGGGCCGGT	6778	False	NA	NA	False	NA	NA	NA	117839070	117839284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117839100_117839300
ES.6932.1	chr11	+	446	2	Intergenic	novelGene_5619	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAATGAAGAAAA	6378	False	NA	NA	False	AAAACA	-21	NA	117867173	117871657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117867315_117871352
ES.6932.2	chr11	+	1453	1	Intergenic	novelGene_5620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	6379	False	NA	NA	False	NA	NA	NA	117867174	117868627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_117867200_117868600
ES.6933.1	chr11	-	3878	4	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	-6528	0	intron_retention	FALSE	canonical	0	0	junction_2	621.782562923371	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	8371	False	NA	NA	False	AATAAA	-30	NA	117867401	117856904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859145_117859700_117860958_117864111_117864363_117867271
ES.6933.10	chr11	-	2513	2	NIC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	-21	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117860894	117856914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117859145_117860611
ES.6933.11	chr11	-	2164	2	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	3	-11	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	1102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAAGTGACTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	117860009	117856915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859010_117859939
ES.6933.12	chr11	-	1461	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	5	1086	5	-1086	multi-exon	FALSE	canonical	3	1319	junction_1	0	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGGAACTTGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	117860007	117857990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_117859145_117859700
ES.6933.2	chr11	-	3893	1	Genic_Genomic	ENSMUSG00000053113.4	novel	NA	NA	NA	NA	76	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860797	117856904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_117856900_117860800
ES.6933.3	chr11	-	2617	3	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_2	646	1102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860807	117856904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859145_117859700_117859882_117860611
ES.6933.4	chr11	-	2235	2	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860061	117856904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859105_117860026
ES.6933.5	chr11	-	2699	3	NIC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	1	22	junction_2	648.5	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860842	117856904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117859145_117859700_117859929_117860611
ES.6933.6	chr11	-	3568	3	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	-262	-10	intron_retention	FALSE	canonical	0	0	junction_2	659.5	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117861135	117856914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859145_117859700_117860958_117861054
ES.6933.7	chr11	-	2255	2	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	398	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117859614	117856914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859145_117859589
ES.6933.8	chr11	-	2350	3	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	411	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117859601	117856914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117858238_117858447_117859145_117859271
ES.6933.9	chr11	-	2522	2	NNC	ENSMUSG00000053113.4	novel	2552	2	NA	NA	449	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTGACTTGAG	NA	False	NA	NA	False	AATAAA	-20	NA	117859563	117856914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117859145_117859271
ES.6934.1	chr11	+	2044	10	NNC	ENSMUSG00000017715.12	novel	2197	10	NA	NA	-40	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	110.635537790631	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877670	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896525_117905472_117905549_117910432_117910559_117914230
ES.6934.11	chr11	+	1948	9	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	109.380071311003	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877690	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896525_117910432_117910559_117914230
ES.6934.13	chr11	+	2165	10	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	132.396710264602	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGACTGCTGTTGTCTC	NA	False	NA	5	True	TATAAA	-15	NA	117877693	117914752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893217_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910563_117914230
ES.6934.14	chr11	+	1988	10	NNC	ENSMUSG00000017715.12	novel	2197	10	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	121.924789608134	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGTTGCTCAAGTG	NA	False	NA	14	True	AATAAA	-12	NA	117877693	117914835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914454
ES.6934.16	chr11	+	2591	10	NNC	ENSMUSG00000017715.12	novel	2197	10	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	126.853760461446	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCTCAAGTGATGTGG	NA	False	NA	20	True	AATAAA	-18	NA	117877701	117914841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894279_117895747_117896718_117905472_117905549_117910432_117910559_117914230
ES.6934.17	chr11	+	2127	10	FSM	ENSMUSG00000017715.12	ENSMUST00000017859.10	2197	10	-9	79	-9	7	multi-exon	FALSE	canonical	1	46	junction_7	99.2782596518803	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTTGTCTCTTATCC	NA	False	NA	11	True	TATAAA	-21	NA	117877701	117914758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
ES.6934.18	chr11	+	2224	10	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	112.255110692312	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCAAGTGATGTGGGTG	NA	False	NA	23	True	AATAAA	-21	NA	117877705	117914844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894224_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ES.6934.2	chr11	+	2086	10	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	102.120601662694	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877670	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914454
ES.6934.20	chr11	+	2130	10	NNC	ENSMUSG00000017715.12	novel	2197	10	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	125.436521745679	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877736	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893217_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
ES.6934.21	chr11	+	2054	10	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	256	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	125.685773181561	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGACTGCTGTTGTCTC	NA	False	NA	5	True	TATAAA	-15	NA	117877966	117914752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117878038_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
ES.6934.22	chr11	+	1031	3	NIC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	4799	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	55	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117896419	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117896718_117910432_117910559_117914230
ES.6934.23	chr11	+	9201	2	NNC	ENSMUSG00000017715.12	novel	1953	8	NA	NA	4847	8420	intron_retention	FALSE	canonical	0	0	junction_1	0	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCCATCTGTGTGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	117896467	117923257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117896642_117914230
ES.6934.24	chr11	+	969	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4301	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	147.648983139818	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117898867	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117898955_117905399_117905549_117910432_117910559_117914230
ES.6934.25	chr11	+	2272	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4277	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.168752252758	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCCTTAGCCAGACTG	NA	False	NA	-5	True	TATAAA	-5	NA	117898891	117914742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117900377_117905399_117905549_117910432_117910559_117914230
ES.6934.26	chr11	+	866	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4273	-2	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	151.078346121033	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGTTGCTCAAGTG	NA	False	NA	14	True	AATAAA	-12	NA	117898895	117914835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117898955_117905472_117905549_117910432_117910559_117914230
ES.6934.27	chr11	+	5620	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-2543	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	153.168752252758	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117900625	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117903181_117903216_117905549_117910432_117910559_117914230
ES.6934.28	chr11	+	3174	2	ISM	ENSMUSG00000017715.12	ENSMUST00000155507.2	3113	3	4823	0	4823	0	3prime_fragment	FALSE	canonical	1	116	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117907991	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_117910559_117914230
ES.6934.29	chr11	+	2520	1	NIC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	5825	-3238	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAACAAAATAACCTTT	NA	False	NA	NA	False	NA	NA	NA	117908993	117911513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117909000_117911500
ES.6934.3	chr11	+	2308	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	568	-13	-25	13	multi-exon	FALSE	canonical	1	116	junction_9	67.5268579397108	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATGTGGGTGCGTGAC	NA	False	NA	29	True	AATAAA	-27	NA	117877685	117914850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ES.6934.4	chr11	+	1889	9	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	129.165349455649	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877687	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896459_117910432_117910563_117914230
ES.6934.5	chr11	+	2362	11	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.830568770897	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877688	117914837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_117877840_117888266_117888457_117888576_117888647_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ES.6934.8	chr11	+	10976	9	NIC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-21	3	intron_retention	FALSE	canonical	1	116	junction_8	68.7130582567826	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCTCAAGTGATGTG	NA	False	NA	19	True	AATAAA	-17	NA	117877689	117914840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117905549_117910432_117910559_117914230
ES.6934.9	chr11	+	4140	9	NIC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	-21	-1	intron_retention	FALSE	canonical	1	116	junction_8	71.6195460401698	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTTGCTCAAGTGA	NA	False	NA	15	True	AATAAA	-13	NA	117877689	117914836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117896718_117905399_117905549_117910432_117910559_117914230
ES.6935.1	chr11	-	6039	1	Antisense	novelGene_ENSMUSG00000017715.12_AS_novelGene_ENSMUSG00000098958.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATTAATTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	117894884	117888845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_117888800_117894900
ES.6936.1	chr11	-	2066	1	Antisense	novelGene_ENSMUSG00000017715.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGAACGGACAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	117897517	117895451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_117895500_117897500
ES.6937.1	chr11	-	1653	8	NNC	ENSMUSG00000033987.17	novel	14889	81	NA	NA	55294	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	4.27617987059879	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCGTCTGATGCACTC	NA	False	NA	NA	False	ATTAAA	-15	NA	117924726	117913903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924601
ES.6937.2	chr11	-	2774	15	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	43885	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	4.57421789902439	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCCGTCTGATGCACTC	NA	False	NA	NA	False	ATTAAA	-15	NA	117936135	117913903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117917498_117917682_117918149_117918330_117923418_117923611_117924561_117924790_117925074_117925203_117927157_117927307_117928974_117929169_117930727_117930851_117931807_117931979_117932905_117933071_117936047
ES.6937.3	chr11	-	2005	10	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	50890	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.10359673613764	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCCGTCTGATGCACT	NA	False	NA	NA	False	ATTAAA	-14	NA	117929130	117913904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117914324_117915419_117915646_117915928_117916073_117916343_117916527_117918149_117918330_117923418_117923611_117924561_117924790_117925074_117925203_117927157_117927307_117928974
ES.6938.1	chr11	-	3376	1	Intergenic	novelGene_5621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGGGCAAATGGATGTA	NA	False	NA	NA	False	NA	NA	NA	117956936	117953560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_117953600_117956900
ES.6938.2	chr11	-	3871	23	ISM	ENSMUSG00000033987.17	ENSMUST00000132685.9	13612	81	39092	42918	2160	17736	internal_fragment	FALSE	canonical	0	0	junction_8	1.80220250923627	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTAGCCTCATGCCGGG	9502	False	NA	NA	False	ATTAAA	-13	NA	117982368	117956819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_117957305_117957716_117957882_117958336_117958499_117959740_117959833_117960207_117960356_117961280_117961384_117963670_117963837_117964341_117964550_117964714_117964889_117964987_117965271_117969387_117969537_117970379_117970508_117971538_117971672_117972299_117972438_117972709_117972938_117973126_117973266_117973650_117973809_117976893_117976999_117977738_117977896_117978955_117979117_117979775_117979908_117981541_117981650_117982219
ES.6938.3	chr11	-	4543	22	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	39	17736	intron_retention	FALSE	canonical	0	0	junction_14	1.73532068174177	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTAGCCTCATGCCGGG	7381	False	NA	NA	False	ATTAAA	-13	NA	117984489	117956819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117957305_117957716_117957882_117958336_117958499_117959740_117959833_117960207_117960356_117961280_117961384_117963670_117963837_117964341_117964889_117964987_117965271_117969387_117969537_117970379_117970508_117971538_117971672_117972299_117972438_117972709_117972938_117973126_117973809_117976893_117976999_117977738_117977896_117978955_117979117_117979775_117979908_117981541_117981650_117982219_117982346_117984344
ES.6938.4	chr11	-	4674	23	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	17	17736	intron_retention	FALSE	canonical	0	0	junction_8	1.73681574314025	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTAGCCTCATGCCGGG	7359	False	NA	NA	False	ATTAAA	-13	NA	117984511	117956819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117957305_117957716_117957882_117958336_117958499_117959740_117959833_117960207_117960356_117961280_117961384_117963670_117963837_117964341_117964550_117964714_117964889_117964987_117965271_117969387_117969537_117970379_117970508_117971538_117971672_117972299_117972438_117972709_117972938_117973126_117973266_117973650_117973809_117976893_117976999_117977738_117977896_117978955_117979908_117981541_117981650_117982219_117982346_117984344
ES.6938.5	chr11	-	2671	12	ISM	ENSMUSG00000033987.17	ENSMUST00000084803.12	14889	81	46292	48013	6267	13994	internal_fragment	FALSE	canonical	0	0	junction_3	1.81363066756909	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	117973753	117960561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_117961384_117963670_117963837_117964341_117964550_117964714_117964889_117964987_117965271_117969387_117969537_117970379_117970508_117971538_117971672_117972299_117972438_117972709_117972938_117973126_117973266_117973650
ES.6938.6	chr11	-	3102	15	NIC	ENSMUSG00000033987.17	novel	13612	81	NA	NA	2056	10497	intron_retention	FALSE	canonical	0	0	junction_7	1.98976975388345	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGGACCGTGGTGGA	9398	False	NA	NA	False	AATACA	-19	NA	117982472	117964058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_117964889_117964987_117965271_117969387_117969537_117970379_117970508_117971538_117971672_117972299_117972438_117972709_117972938_117973126_117973266_117973650_117973809_117976893_117976999_117977738_117977896_117978955_117979117_117979775_117979908_117981541_117981650_117982219
ES.6939.1	chr11	-	178	1	Intergenic	novelGene_5622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGGCTTACAGC	NA	False	NA	NA	False	NA	NA	NA	118034326	118034148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118034100_118034300
ES.694.1	chr1	+	182	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAGAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	71875635	71875817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71875600_71875800
ES.6940.1	chr11	+	185	1	Intergenic	novelGene_5623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATATATTCAGAGC	NA	False	NA	NA	False	NA	NA	NA	118125111	118125296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_118125100_118125300
ES.6941.10	chr11	-	1782	10	NNC	ENSMUSG00000017132.18	novel	545	6	NA	NA	-38	3862	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.5256022043466	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTAAAAGTGTCCGAG	8562	False	NA	NA	False	AATAAA	-15	NA	118139456	118071935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118072737_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ES.6941.2	chr11	-	3190	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-50	-5	-18	-4	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTCTGCTCTGCTG	8582	False	NA	-1	True	AATAAA	-21	NA	118139436	118054995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ES.6941.3	chr11	-	3211	13	NNC	ENSMUSG00000017132.18	novel	3135	13	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.2756565018667	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCATGTTCTGCTCTG	8602	False	NA	-4	True	AATAAA	-18	NA	118139416	118054998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084396_118084524_118139264
ES.6941.4	chr11	-	3278	14	NNC	ENSMUSG00000017132.18	novel	3135	13	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	15.7919161403743	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTCATGTTCTGCTCT	8639	False	NA	-5	True	AATAAA	-17	NA	118139379	118054999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118103474_118103624_118139264
ES.6941.6	chr11	-	4296	12	NIC	ENSMUSG00000017132.18	novel	3135	13	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	24	junction_4	8.02063454549556	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACTTCATGTTCTGCT	8623	False	NA	-7	True	AATAAA	-15	NA	118139395	118055001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118084524_118139264
ES.6941.7	chr11	-	3019	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	5	111	5	-111	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTTGTTGACAGGGTT	8637	False	NA	NA	False	AATACA	-11	NA	118139381	118055111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ES.6941.8	chr11	-	2055	9	ISM	ENSMUSG00000017132.18	ENSMUST00000106305.9	3179	13	4	16938	4	3868	5prime_fragment	FALSE	canonical	3	38	junction_1	4.02919036532155	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTCCGAGTTTAGG	8604	False	NA	NA	False	AATAAA	-21	NA	118139414	118071929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ES.6941.9	chr11	-	4011	6	NIC	ENSMUSG00000017132.18	novel	3179	13	NA	NA	-38	3868	intron_retention	FALSE	canonical	3	39	junction_4	3.66606055596467	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTCCGAGTTTAGG	8562	False	NA	NA	False	AATAAA	-21	NA	118139456	118071929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118073740_118074707_118074821_118075797_118076326_118076585_118076653_118083222_118084524_118139264
ES.6942.1	chr11	+	2921	6	Antisense	novelGene_ENSMUSG00000033909.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTAGACGGTGGACAGA	3849	False	NA	NA	False	NA	NA	NA	118150564	118156064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_118152377_118152806_118152956_118153213_118153333_118153862_118153962_118154467_118154671_118155525
ES.6942.2	chr11	+	5535	21	Antisense	novelGene_ENSMUSG00000033909.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTGCTCCCTGAGTCC	3849	False	NA	NA	False	TTTAAA	-12	NA	118150564	118181020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_118152377_118152806_118152956_118153213_118153333_118153860_118153962_118154467_118154671_118155524_118156069_118158629_118158758_118159368_118160037_118162954_118163096_118163775_118163882_118164349_118164485_118165796_118165904_118166962_118167048_118167585_118167659_118168096_118168160_118170028_118170134_118170641_118170762_118175686_118175903_118176560_118176825_118178491_118178657_118180789
ES.6942.3	chr11	+	173	1	Intergenic	novelGene_5624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACTTGTA	6965	False	NA	NA	False	NA	NA	NA	118160189	118160362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_118160200_118160400
ES.6943.1	chr11	-	6640	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	26	3	intron_retention	FALSE	canonical	3	124	junction_6	17.4757449640884	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTGCCTTGTCTC	NA	False	NA	-1	True	AATAAA	-28	NA	118180980	118150473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.12	chr11	-	12157	18	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-19	-3	intron_retention	FALSE	canonical	3	124	junction_6	18.4375876046244	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	118180917	118150482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118176826_118178492_118178650_118180782
ES.6943.14	chr11	-	5654	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	35.9920477327979	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATACCTTTCTGTGTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	118181028	118150482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158793_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.15	chr11	-	4536	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	0	1119	0	84	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATCTCCTTCCCTGTCT	NA	False	NA	69	True	NA	NA	NA	118181057	118151595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.16	chr11	-	3417	3	NIC	ENSMUSG00000033909.18	novel	3815	6	NA	NA	492	0	intron_retention	FALSE	canonical	3	141	junction_2	27	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118156382	118151679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118154669_118155523
ES.6943.17	chr11	-	2727	7	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-2778	0	intron_retention	FALSE	canonical	3	124	junction_5	24.1361876765067	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118159652	118151679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118154669_118155523_118156067_118158627_118158759_118159369
ES.6943.18	chr11	-	1709	6	NNC	ENSMUSG00000033909.18	novel	3815	6	NA	NA	956	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	70.2310472654367	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118155918	118151679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153381_118153860_118153963_118154468_118154669_118155523
ES.6943.19	chr11	-	4458	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	45.7333293667319	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118180943	118151679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118177477_118177598_118178492_118178650_118180782
ES.6943.2	chr11	-	6234	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	27	0	intron_retention	FALSE	canonical	3	124	junction_6	18.0622193352041	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTGTGTCTGCCTTGT	NA	False	NA	-4	True	AATAAA	-25	NA	118180979	118150476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118176826_118178492_118178650_118180782
ES.6943.20	chr11	-	4219	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.443417268435	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGCTACCAGTAGCA	NA	False	NA	-16	True	GATAAA	-19	NA	118180963	118151680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118159703_118159840_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.21	chr11	-	4401	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	36.124230095602	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGCTACCAGTAGCA	NA	False	NA	-16	True	GATAAA	-19	NA	118180963	118151680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176870_118178492_118178650_118180782
ES.6943.22	chr11	-	5012	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	44	-2	intron_retention	FALSE	canonical	3	124	junction_6	18.0622193352041	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTGGCTACCAGTAGC	NA	False	NA	-17	True	GATAAA	-18	NA	118180962	118151681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118176826_118178492_118178650_118180782
ES.6943.24	chr11	-	4426	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	41.9506242537992	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTGGCTACCAGTAGC	NA	False	NA	-17	True	GATAAA	-18	NA	118181086	118151681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178425_118178453_118178572_118178650_118180782
ES.6943.25	chr11	-	5473	20	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	124	junction_6	17.4757449640884	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTGGCTACCAGTAGC	NA	False	NA	-17	True	GATAAA	-18	NA	118181021	118151681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.26	chr11	-	4402	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	36.2550341332069	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTGGCTACCAGTAG	NA	False	NA	-18	True	GATAAA	-17	NA	118180995	118151682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175922_118176563_118176826_118178492_118178650_118180782
ES.6943.27	chr11	-	4313	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	47.2580945447444	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGGCCTGTGGCTACCA	NA	False	NA	-22	True	GATAAA	-13	NA	118181022	118151686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164340_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180880
ES.6943.28	chr11	-	3798	13	NNC	ENSMUSG00000033909.18	novel	3391	19	NA	NA	7	-9331	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	34.8196743554879	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGGACTTCTGGATTT	NA	False	NA	NA	False	AATAAA	-9	NA	118181050	118162544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118178453_118178572_118178650_118180782
ES.6943.29	chr11	-	1766	1	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-12	-4632	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATGGGGCCAAGTTGA	NA	False	NA	NA	False	NA	NA	NA	118181018	118179252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118179300_118181000
ES.6943.3	chr11	-	5709	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	-54	0	-41	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTGTGTCTGCCTTGT	NA	False	NA	-4	True	AATAAA	-25	NA	118181111	118150476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.4	chr11	-	5515	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	36.1843888990819	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTGTGTCTGCCTTG	NA	False	NA	-5	True	AATAAA	-24	NA	118180973	118150477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158704_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6943.5	chr11	-	5512	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	41.9506242537992	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTGTGTCTGCCTTG	NA	False	NA	-5	True	AATAAA	-24	NA	118180968	118150477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178425_118178453_118178572_118178650_118180782
ES.6943.7	chr11	-	7602	5	NIC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-5663	-1	intron_retention	FALSE	canonical	3	124	junction_3	28.9428315822761	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTGTGTCTGCCTTG	NA	False	NA	-5	True	AATAAA	-24	NA	118162537	118150477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118152374_118152804_118154669_118155523_118156067_118158627_118158759_118159369
ES.6943.8	chr11	-	5664	21	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.8661925058992	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTGTGTCTGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	118181018	118150478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118152374_118152804_118152957_118153214_118153374_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162950_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ES.6944.1	chr11	+	179	1	Intergenic	novelGene_5625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118227861	118228040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_118227900_118228000
ES.6945.1	chr11	-	3734	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	-21	-4	-21	4	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGTTGATTCCTTGGCT	2245	False	NA	-3	True	AATAAA	-15	NA	118246353	118191890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ES.6945.2	chr11	-	3317	5	FSM	ENSMUSG00000017466.10	ENSMUST00000155707.3	718	5	36	-2635	36	3	multi-exon	FALSE	canonical	0	0	junction_4	12.913171570145	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGTTGATTCCTTGGC	2068	False	NA	-4	True	AATAAA	-14	NA	118246530	118191891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118246379
ES.6945.3	chr11	-	1053	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	134	2522	134	110	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTCACGCTAGTGT	2400	False	NA	-9	True	AATAAA	-14	NA	118246198	118194416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ES.6946.1	chr11	-	173	1	Intergenic	novelGene_5626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	118252434	118252261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118252300_118252400
ES.6947.1	chr11	-	2449	6	FSM	ENSMUSG00000033880.12	ENSMUST00000043722.10	2330	6	-122	3	-122	-3	multi-exon	TRUE	canonical	1	1	junction_1	1.85472369909914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGAAGTTTGTTCATCCA	9892	False	NA	NA	False	ATTAAA	-15	NA	118293040	118283579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118284949_118287416_118287670_118288946_118289079_118289205_118289398_118290553_118290628_118292611
ES.6948.1	chr11	-	2885	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	-9	-3	-9	3	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCTATGTTGGCTGT	8983	False	NA	2	True	AATAAA	-20	NA	118309887	118297111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
ES.6948.10	chr11	-	2963	5	NNC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_4	71.3740148793663	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTCTTGTCTATGTTG	9025	False	NA	-3	True	AATAAA	-15	NA	118309845	118297116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308606_118309755
ES.6948.11	chr11	-	4788	4	NIC	ENSMUSG00000025575.15	novel	2873	5	NA	NA	22	-1	intron_retention	FALSE	canonical	3	81	junction_3	41.9867704031745	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTCTTGTCTATGTTG	9043	False	NA	-3	True	AATAAA	-15	NA	118309827	118297116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118298921_118299506_118302338_118308399_118308481_118309755
ES.6948.12	chr11	-	2964	6	NNC	ENSMUSG00000025575.15	novel	1476	5	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	77.8804211596214	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGGTTCTCTTGTCTA	9035	False	NA	-8	True	AATAAA	-10	NA	118309835	118297121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118298921_118299210_118299394_118299506_118299711_118301678_118302338_118308399_118308481_118309797
ES.6948.13	chr11	-	2206	5	NIC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	-1	606	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	71.8065978862667	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTACTAGAGCAGTTT	9020	False	NA	NA	False	TTTAAA	-17	NA	118309850	118297863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309797
ES.6948.14	chr11	-	2742	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	85	1355	22	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTGCTTTTTTTCTT	9043	False	NA	NA	False	CATAAA	-17	NA	118309827	118298469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
ES.6948.15	chr11	-	1447	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	29	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTGCTTTTTTTCTT	9021	False	NA	NA	False	CATAAA	-17	NA	118309849	118298469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
ES.6948.16	chr11	-	1443	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	75	1355	46	0	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTGCTTTTTTTCTT	9067	False	NA	NA	False	CATAAA	-17	NA	118309803	118298469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
ES.6948.17	chr11	-	1641	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	0	1354	0	0	multi-exon	FALSE	canonical	3	9	junction_4	68.7786304021823	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTGCTTTTTTTCTT	9021	False	NA	NA	False	CATAAA	-17	NA	118309849	118298469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
ES.6948.18	chr11	-	1477	5	NNC	ENSMUSG00000025575.15	novel	2873	5	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.8144582694805	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTCGTTTGCTTTTTTTC	9025	False	NA	NA	False	CATAAA	-15	NA	118309845	118298471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118298921_118299506_118299711_118301684_118302338_118308399_118308481_118309755
ES.6948.19	chr11	-	1070	3	ISM	ENSMUSG00000025575.15	ENSMUST00000106289.9	1600	6	13	2960	13	-2960	5prime_fragment	FALSE	canonical	3	81	junction_2	43.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCCTAGAAGTTTGTTT	9034	False	NA	NA	False	NA	NA	NA	118309836	118301429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_118302338_118308399_118308481_118309755
ES.6948.2	chr11	-	2921	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	-88	-1357	-54	2	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTATGTTGGCTG	8904	False	NA	1	True	AATAAA	-19	NA	118309966	118297112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
ES.6948.3	chr11	-	2998	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	-1	-2	-1	1	multi-exon	TRUE	canonical	3	9	junction_4	68.7786304021823	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTCTATGTTGGCT	9020	False	NA	0	True	AATAAA	-18	NA	118309850	118297113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
ES.6948.4	chr11	-	4237	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	-55	0	-55	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8903	False	NA	-1	True	AATAAA	-17	NA	118309967	118297114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
ES.6948.5	chr11	-	4227	5	ISM	ENSMUSG00000025575.15	ENSMUST00000106289.9	1600	6	3	-1355	3	0	intron_retention	FALSE	canonical	2	2	junction_2	83.2687666535298	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9024	False	NA	-1	True	AATAAA	-17	NA	118309846	118297114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_118298921_118299506_118299711_118300905_118301017_118301678_118302338_118308399
ES.6948.6	chr11	-	2943	6	FSM	ENSMUSG00000025575.15	ENSMUST00000106289.9	1600	6	12	-1355	12	0	multi-exon	FALSE	canonical	2	2	junction_2	74.5133545077659	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9033	False	NA	-1	True	AATAAA	-17	NA	118309837	118297114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118298921_118299506_118299711_118300905_118301017_118301678_118302338_118308399_118308481_118309755
ES.6948.7	chr11	-	6085	3	NIC	ENSMUSG00000025575.15	novel	4182	4	NA	NA	2	0	intron_retention	FALSE	canonical	3	168	junction_2	2	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9023	False	NA	-1	True	AATAAA	-17	NA	118309847	118297114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118298921_118299506_118302338_118308399
ES.6948.8	chr11	-	2954	5	NIC	ENSMUSG00000025575.15	novel	2995	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	71.8065978862667	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	9021	False	NA	-1	True	AATAAA	-17	NA	118309849	118297114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309797
ES.6948.9	chr11	-	2940	6	NIC	ENSMUSG00000025575.15	novel	1600	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	80.4054724505739	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTTGTCTATGTTGG	8993	False	NA	-2	True	AATAAA	-16	NA	118309877	118297115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_118298921_118299506_118299711_118300905_118301017_118301678_118302338_118308399_118308481_118309797
ES.6949.1	chr11	-	4971	1	Intergenic	novelGene_5627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGATTATGA	NA	False	NA	NA	False	NA	NA	NA	118364952	118359981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118360000_118365000
ES.6949.2	chr11	-	3992	1	Intergenic	novelGene_5628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGGCCTGACCAGTGAA	NA	False	NA	NA	False	TATAAA	-11	NA	118364943	118360951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118361000_118364900
ES.6949.3	chr11	-	1836	1	Intergenic	novelGene_5629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAATCTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	118364998	118363162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118363200_118365000
ES.695.1	chr1	-	384	3	Genic_Genomic	ENSMUSG00000102689.2	novel	3521	1	NA	NA	-6404	-104	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAGTCCTAAGTCTTT	4275	False	NA	NA	False	NA	NA	NA	71892173	71882352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_71882542_71890475_71890645_71892147
ES.6950.1	chr11	+	4069	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTGAGTCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	118367652	118380035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
ES.6950.10	chr11	+	1681	5	NNC	ENSMUSG00000033857.13	novel	922	6	NA	NA	-3	1838	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	58.0969018106818	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	118367782	118371840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118367931_118369708_118369780_118369911_118370114_118370412_118370496_118370663
ES.6950.11	chr11	+	4134	12	NIC	ENSMUSG00000033857.13	novel	4303	12	NA	NA	-3	2	intron_retention	FALSE	canonical	2	3	junction_2	50.5160149714429	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAAAGGTGCTTCTTT	NA	False	NA	8	True	CATAAA	-15	NA	118367782	118378601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118369780_118369915_118370114_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376145_118376582_118376732_118377270_118377380_118377647_118377763_118377916
ES.6950.12	chr11	+	4197	13	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	81	junction_11	10.4642247682282	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTGAGTCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	118367789	118380035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377763_118377916
ES.6950.13	chr11	+	4010	14	NNC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	39.9798765949118	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTGAGTCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	118367789	118380035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118367931_118369708_118369780_118369915_118370114_118372101_118372251_118372614_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.14	chr11	+	2578	14	NNC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.1296202103057	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGAAAAGGTGCTTCTT	NA	False	NA	7	True	CATAAA	-14	NA	118367790	118378600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372614_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.17	chr11	+	4759	13	NNC	ENSMUSG00000033857.13	novel	3807	14	NA	NA	5	11	intron_retention	FALSE	non_canonical	0	0	junction_3	45.2114630253091	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTCTTTTGAGAATGG	NA	False	NA	17	True	CATAAA	-24	NA	118367802	118378610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118367931_118369708_118369780_118369915_118370496_118370663_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
ES.6950.18	chr11	+	3750	13	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	40.6905667473706	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTGAGTCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	118367815	118380035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369915_118370114_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.19	chr11	+	4608	12	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	107	-5	intron_retention	FALSE	canonical	3	104	junction_10	6.00413080943941	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAGATGTTGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	118367915	118380030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118377763_118377916
ES.6950.20	chr11	+	2082	11	ISM	ENSMUSG00000033857.13	ENSMUST00000171769.8	3807	14	4313	1314	151	0	3prime_fragment	FALSE	canonical	3	81	junction_8	11.0131739294356	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAAAAGGTGCTTCT	NA	False	NA	6	True	CATAAA	-13	NA	118372098	118378599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.3	chr11	+	2633	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	2	1429	2	7	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTGCTTCTTTTGAGA	NA	False	NA	13	True	CATAAA	-20	NA	118367656	118378606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.6	chr11	+	2400	13	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	4	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	37.3961525056017	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGTGCTTCTTTTGA	NA	False	NA	11	True	CATAAA	-18	NA	118367775	118378604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377916
ES.6950.7	chr11	+	2897	12	FSM	ENSMUSG00000033857.13	ENSMUST00000139917.9	4303	12	-27	1433	-4	3	multi-exon	FALSE	canonical	2	3	junction_3	49.4089027344414	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAAAGGTGCTTCTTTT	NA	False	NA	9	True	CATAAA	-16	NA	118367781	118378602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_118367931_118369708_118369780_118369915_118370114_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376145_118376582_118377380_118377647_118377763_118377916
ES.6950.8	chr11	+	2353	13	NIC	ENSMUSG00000033857.13	novel	3807	14	NA	NA	-4	5	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	40.6905667473706	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAGGTGCTTCTTTTGA	NA	False	NA	11	True	CATAAA	-18	NA	118367781	118378604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118367931_118369708_118369780_118369915_118370114_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6950.9	chr11	+	4281	13	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	-4	2	intron_retention	FALSE	canonical	3	81	junction_10	10.1351971970072	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAAAAGGTGCTTCTTT	NA	False	NA	8	True	CATAAA	-15	NA	118367781	118378601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ES.6951.1	chr11	-	2073	9	NNC	ENSMUSG00000025576.18	novel	3084	14	NA	NA	3447	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.968245836551854	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGCTCTTTCCGATTT	7163	False	NA	NA	False	AATAAA	-19	NA	118394732	118380587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176_118387217_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394664
ES.6952.1	chr11	+	3214	2	Antisense	novelGene_ENSMUSG00000025576.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAGTCTCAACTGTTA	8943	False	NA	NA	False	ATTAAA	-19	NA	118442787	118446740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_118443246_118443984
ES.6953.1	chr11	+	211	1	Intergenic	novelGene_5630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTCTTGGCAA	NA	False	NA	17	True	NA	NA	NA	118905837	118906048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_118905800_118906000
ES.6954.1	chr11	+	3752	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	60	-5	60	5	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCTCTTCCCCTTTTT	NA	False	NA	18	True	AATAAA	-20	NA	118913847	118922101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
ES.6954.2	chr11	+	3571	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	71	165	71	-165	multi-exon	FALSE	canonical	3	204	junction_1	10.9630059746403	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCACTTTGCCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	118913858	118921931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
ES.6954.3	chr11	+	4608	4	NIC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	71	-1	intron_retention	FALSE	canonical	3	204	junction_1	12.2565175405668	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTGTTCTCTTCCC	NA	False	NA	12	True	AATAAA	-14	NA	118913858	118922095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118914007_118914083_118915067_118917275_118917382_118918724
ES.6954.4	chr11	+	3747	5	NNC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	76	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	93.8442859208807	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTCTCTTCCCCTTTTT	NA	False	NA	18	True	AATAAA	-20	NA	118913863	118922101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118914007_118914083_118914139_118915000_118915067_118917275_118917382_118918724
ES.6954.5	chr11	+	3714	5	NNC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	78	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	95.5654226171789	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTGTTCTCTTCCC	NA	False	NA	12	True	AATAAA	-14	NA	118913865	118922095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118914007_118914083_118914128_118915014_118915067_118917275_118917382_118918724
ES.6954.6	chr11	+	4550	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	90	-833	90	833	multi-exon	FALSE	canonical	3	204	junction_1	10.9630059746403	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTATACCTCTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	118913877	118922929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
ES.6954.7	chr11	+	3781	4	NIC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	105	2	intron_retention	FALSE	canonical	3	213	junction_1	8.73053390247253	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCTCTTCCCCTT	NA	False	NA	15	True	AATAAA	-17	NA	118913892	118922098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_118914128_118915000_118915067_118917275_118917382_118918724
ES.6954.8	chr11	+	3883	6	NNC	ENSMUSG00000025577.8	novel	3807	5	NA	NA	105	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	102.4331977437	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTGCTGTTCTCTTCC	NA	False	NA	11	True	AATAAA	-13	NA	118913892	118922094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118917503_118917687_118918724
ES.6955.1	chr11	-	1246	3	Antisense	novelGene_ENSMUSG00000025577.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTAGTCTGCCTCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	118914393	118903152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_118903967_118905071_118905209_118914098
ES.6956.1	chr11	-	178	1	Intergenic	novelGene_5631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	118922305	118922127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_118922100_118922300
ES.6957.1	chr11	-	3526	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	51	3	-7	-3	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACACGTGTCTTGGCTT	NA	False	NA	NA	False	AATATA	-11	NA	118931744	118927133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
ES.6957.2	chr11	-	1386	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	60	2134	2	614	multi-exon	FALSE	canonical	3	19	junction_4	2.91547594742265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCTTTTATTTAAACG	NA	False	NA	-1	True	AATATA	-16	NA	118931735	118929264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
ES.6958.1	chr11	-	2663	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-66	2582	-66	1218	multi-exon	FALSE	canonical	3	62	junction_3	7	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTCCGAGATTAGCT	NA	False	NA	0	True	ATTAAA	-21	NA	118977113	118970980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ES.6958.2	chr11	-	2652	5	NNC	ENSMUSG00000039989.8	novel	5179	5	NA	NA	-52	1215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.4429253066558	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGTCCGAGATTA	NA	False	NA	-3	True	ATTAAA	-18	NA	118977099	118970983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976768
ES.6958.3	chr11	-	2508	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-18	2689	-18	1111	multi-exon	FALSE	canonical	3	62	junction_3	7	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAAAGAGCTCTCTAGAA	NA	False	NA	-107	True	AAAAAG	-11	NA	118977065	118971087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ES.6958.4	chr11	-	2363	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	-59	2875	-59	925	multi-exon	FALSE	canonical	3	62	junction_3	7	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATGTTATATTCTATA	NA	False	NA	NA	False	NA	NA	NA	118977106	118971273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ES.6959.1	chr11	+	176	1	Intergenic	novelGene_5632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATATATAAACATGTT	2788	False	NA	NA	False	NA	NA	NA	118995731	118995907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_118995700_118995900
ES.696.1	chr1	+	215	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAGTCCCCAATAACCA	NA	False	NA	NA	False	NA	NA	NA	71947919	71948134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_71947900_71948100
ES.6960.1	chr11	-	4039	1	Genic_Genomic	ENSMUSG00000039976.5	novel	NA	NA	NA	NA	74896	3	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCCTGTGCCTTGAGAG	3015	False	NA	2	True	AATAAA	-18	NA	119037906	119033867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_119033900_119037900
ES.6961.1	chr11	+	2065	2	Antisense	novelGene_ENSMUSG00000039976.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAGCACGGAGCCCAGA	7499	False	NA	NA	False	NA	NA	NA	119096885	119099222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_119097060_119097331
ES.6961.2	chr11	+	240	1	Intergenic	novelGene_5634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7685	False	NA	NA	False	NA	NA	NA	119097071	119097311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119097100_119097300
ES.6962.1	chr11	-	2128	6	NIC	ENSMUSG00000039976.5	novel	6986	12	NA	NA	13067	-6643	intron_retention	FALSE	canonical	1	1	junction_2	0.748331477354788	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTATGCGTGTGCACGG	NA	False	NA	NA	False	NA	NA	NA	119099735	119044603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119044902_119045907_119046043_119046845_119046995_119047468_119048714_119049556_119049719_119099596
ES.6962.2	chr11	-	880	2	Intergenic	novelGene_5633	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATGTTGTCTGTAGGA	NA	False	NA	NA	False	NA	NA	NA	119092552	119091086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119091578_119092163
ES.6962.3	chr11	-	2442	3	ISM	ENSMUSG00000039976.5	ENSMUST00000207655.2	2855	12	-49	60143	-11	3363	5prime_fragment	FALSE	canonical	2	4	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGAGAGTATGTGACTA	NA	False	NA	NA	False	AATAAA	-23	NA	119119336	119098103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119100195_119101330_119101567_119119221
ES.6963.1	chr11	+	4809	21	NNC	ENSMUSG00000039963.21	novel	4769	21	NA	NA	-5	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24116729214965	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGAAGAGTTAAGACACA	NA	False	NA	NA	False	AATAAA	-21	NA	119119392	119156070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119119574_119119853_119119989_119121447_119121521_119122298_119123115_119125477_119125623_119126969_119127125_119128689_119128774_119128854_119129075_119133252_119133411_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
ES.6963.2	chr11	+	2894	13	NNC	ENSMUSG00000039963.21	novel	4769	21	NA	NA	3826	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.45580146176495	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGTTAAGACACATTT	6628	False	NA	NA	False	AATAAA	-24	NA	119133369	119156073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119133419_119133538_119133662_119133822_119133945_119136660_119136905_119136993_119137177_119141764_119142011_119142628_119142843_119144075_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
ES.6963.3	chr11	+	3679	4	ISM	ENSMUSG00000039963.21	ENSMUST00000053440.8	3524	19	23872	-1	-552	1	intron_retention	FALSE	canonical	0	0	junction_1	6.12825877028341	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGCCATGGTCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	119143826	119153727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119144246_119144445_119144538_119145167_119145289_119150680
ES.6963.4	chr11	+	1962	6	ISM	ENSMUSG00000039963.21	ENSMUST00000236813.2	4769	21	24403	-9	-552	9	3prime_fragment	FALSE	canonical	0	0	junction_1	4.84148737476408	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGTTAAGACACATTT	NA	False	NA	NA	False	AATAAA	-24	NA	119143826	119156073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119144246_119144445_119144538_119145167_119145289_119150680_119150870_119153900_119154060_119155091
ES.6963.5	chr11	+	1016	1	Intergenic	novelGene_5635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAAAAC	189	False	NA	NA	False	NA	NA	NA	119145310	119146326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119145300_119146300
ES.6963.6	chr11	+	1323	3	ISM	ENSMUSG00000039963.21	ENSMUST00000126652.2	1662	4	926	-2	87	0	3prime_fragment	FALSE	canonical	3	9	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGGTCAGAAGAGTTAA	5557	False	NA	NA	False	AATAAA	-15	NA	119150678	119156064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119150870_119153900_119154060_119155091
ES.6964.1	chr11	-	175	1	Intergenic	novelGene_5636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCAATCTTTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	119156620	119156445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119156400_119156600
ES.6965.1	chr11	+	4216	21	NNC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	-1312	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	135.757311037012	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACGTCACCTCATGTCT	NA	False	NA	22	True	AATAAA	-23	NA	119157400	119176283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119157482_119158082_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.10	chr11	+	3243	19	NIC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	142.915497781636	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158858	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.13	chr11	+	4725	19	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	16	4	intron_retention	TRUE	canonical	0	0	junction_3	111.726849453875	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGTCACCTCATGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	119158869	119176284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119164169_119164211_119164967_119165040_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.14	chr11	+	2949	19	NNC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_1	148.616760017249	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158870	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119158918_119161353_119161505_119163695_119163813_119164800_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.15	chr11	+	4355	17	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	17	-4	intron_retention	FALSE	canonical	0	0	junction_12	116.648979314009	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	False	NA	15	True	AATAAA	-16	NA	119158870	119176276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.16	chr11	+	4509	18	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	17	1	intron_retention	FALSE	canonical	3	393	junction_5	41.0250155772571	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158870	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.17	chr11	+	4635	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	107.930802701292	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158876	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119173256_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.18	chr11	+	3963	17	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	23	-4	intron_retention	FALSE	canonical	3	393	junction_4	42.8201179353817	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	False	NA	15	True	AATAAA	-16	NA	119158876	119176276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.19	chr11	+	3371	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	111.789098167647	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158877	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.2	chr11	+	3804	21	NNC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	-405	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	135.757311037012	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTTCTCACGTCACC	NA	False	NA	14	True	AATAAA	-15	NA	119158307	119176275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119158574_119158671_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.20	chr11	+	3886	18	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	24	-6	intron_retention	FALSE	canonical	3	393	junction_5	42.0516242295826	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCAGTTCTCACGTCAC	NA	False	NA	13	True	AATAAA	-14	NA	119158877	119176274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.21	chr11	+	3253	18	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	26	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	115.000496463499	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158879	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165678_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.22	chr11	+	3347	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	2	17	junction_5	108.145606578456	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCACGTCACCTCATGTC	NA	False	NA	21	True	AATAAA	-22	NA	119158880	119176282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.23	chr11	+	5922	17	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	27	1	intron_retention	FALSE	canonical	3	393	junction_5	42.5996992360275	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158880	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119164967_119165040_119165138_119165466_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.24	chr11	+	3568	19	NNC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	32	-4	intron_retention	FALSE	canonical	0	0	junction_4	142.935807486187	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	False	NA	15	True	AATAAA	-16	NA	119158885	119176276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165126_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.25	chr11	+	5279	17	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	33	-2	intron_retention	FALSE	canonical	0	0	junction_4	118.195018930579	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158886	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165044_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.26	chr11	+	5269	17	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	33	-2	intron_retention	FALSE	canonical	0	0	junction_3	118.426665071681	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158886	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119164169_119164211_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.27	chr11	+	3366	19	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	35	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	111.789098167647	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158888	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165458_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.28	chr11	+	3528	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	36	-2	intron_retention	FALSE	canonical	3	393	junction_6	40.9945795874961	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158889	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.29	chr11	+	3438	19	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	169.435418703148	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158890	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171387_119171938_119172088_119173893_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.3	chr11	+	3527	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	118	-12	-21	12	multi-exon	FALSE	canonical	3	393	junction_7	40.3001893687597	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCATGTCTATATATGAC	NA	False	NA	31	True	AATAAA	-32	NA	119158830	119176292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.32	chr11	+	3412	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.48906910995	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGCAGTTCTCACGTCA	NA	False	NA	12	True	AATAAA	-13	NA	119158890	119176273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161469_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.33	chr11	+	5389	18	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	42	0	intron_retention	FALSE	canonical	3	393	junction_5	42.1731477893655	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158895	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119161505_119163695_119163842_119164800_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.34	chr11	+	3009	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.614467236528	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158896	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119161353_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.35	chr11	+	3373	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	108.808072659616	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCACGTCACCTCAT	NA	False	NA	18	True	AATAAA	-19	NA	119158896	119176279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165541_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.38	chr11	+	4969	17	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	49	0	intron_retention	FALSE	canonical	3	393	junction_5	40.9030866805917	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158902	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.39	chr11	+	3765	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	55	-1	intron_retention	FALSE	canonical	3	393	junction_6	40.9945795874961	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCACGTCACCTCAT	NA	False	NA	18	True	AATAAA	-19	NA	119158908	119176279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.4	chr11	+	3383	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	111.774698985653	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	False	NA	15	True	AATAAA	-16	NA	119158844	119176276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.40	chr11	+	3414	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	108.388114567518	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158908	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168417_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.41	chr11	+	3432	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	108.78510672874	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119158908	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174146_119174492_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.42	chr11	+	3501	21	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.089856120134	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158920	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119159049_119159234_119159311_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.43	chr11	+	3294	19	ISM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	2060	5	-430	-5	3prime_fragment	FALSE	canonical	3	393	junction_6	41.3868008421842	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTTCTCACGTCACC	NA	False	NA	14	True	AATAAA	-15	NA	119160911	119176275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.44	chr11	+	4522	17	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	-201	0	intron_retention	FALSE	canonical	3	393	junction_5	41.5556385313714	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119161140	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119161505_119163695_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.45	chr11	+	2888	19	NNC	ENSMUSG00000025579.15	novel	816	7	NA	NA	250	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.287540482602	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCACGTCACCTCATGTC	NA	False	NA	21	True	AATAAA	-22	NA	119161591	119176282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119161772_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.46	chr11	+	3367	16	NNC	ENSMUSG00000025579.15	novel	816	7	NA	NA	265	-2	intron_retention	FALSE	canonical	0	0	junction_1	121.878518752622	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCTCACGTCACCTCA	NA	False	NA	17	True	AATAAA	-18	NA	119161606	119176278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119161772_119163695_119163842_119164800_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.47	chr11	+	1817	11	ISM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	9473	0	-215	0	3prime_fragment	FALSE	canonical	3	414	junction_3	38.6983203769879	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119168324	119176280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.48	chr11	+	3861	7	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	202	1	intron_retention	FALSE	canonical	3	439	junction_3	33.0487854878545	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119168741	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.5	chr11	+	4723	17	NIC	ENSMUSG00000025579.15	novel	3363	20	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	38	junction_1	109.744714422837	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGTTCTCACGTCACC	NA	False	NA	14	True	AATAAA	-15	NA	119158848	119176275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119158918_119160913_119161505_119163695_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.7	chr11	+	4460	19	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	-3	4	intron_retention	FALSE	canonical	3	393	junction_6	40.3689772100762	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGTCACCTCATGTCTA	NA	False	NA	23	True	AATAAA	-24	NA	119158848	119176284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6965.8	chr11	+	3901	18	NIC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	-3	1	intron_retention	FALSE	canonical	3	393	junction_5	41.7065875655967	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCACGTCACCTCATGT	NA	False	NA	20	True	AATAAA	-21	NA	119158848	119176281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ES.6966.1	chr11	-	1683	2	Antisense	novelGene_ENSMUSG00000025579.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATCAAGGTCTCTTCC	9510	False	NA	NA	False	NA	NA	NA	119161481	119158026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_119159682_119161453
ES.6967.1	chr11	-	3129	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	15	-1635	15	1635	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGCTTAAAATGGCTGT	NA	False	NA	NA	False	AAAAAG	-16	NA	119190900	119177553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.10	chr11	-	1987	6	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	-2254	0	intron_retention	FALSE	canonical	2	960	junction_1	166.11489999395	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119186676	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179803_119183644_119183761_119184384_119185232_119185396_119185530_119186298
ES.6967.11	chr11	-	1395	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	407.809528542735	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190838	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185494_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.14	chr11	-	1547	11	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1167	junction_4	106.079262817951	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190854	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.15	chr11	-	1517	11	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	960	junction_1	145.862983652467	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190843	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.16	chr11	-	2560	10	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	7	-1	intron_retention	FALSE	canonical	2	960	junction_1	159.909079105118	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGAGTGCAGATCTTT	NA	False	NA	-12	True	ATTAAA	-18	NA	119190908	119179190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119185232_119185396_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.17	chr11	-	1527	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_9	396.99582611208	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGAGTGCAGATCTTT	NA	False	NA	-12	True	ATTAAA	-18	NA	119190902	119179190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186859_119186960_119188630_119188704_119190653
ES.6967.18	chr11	-	3384	11	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	72	3	1	-2	intron_retention	FALSE	canonical	2	960	junction_1	152.08316803644	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGAGTGCAGATCTT	NA	False	NA	-13	True	ATTAAA	-17	NA	119190843	119179191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630
ES.6967.19	chr11	-	4124	8	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	2	960	junction_1	174.774139963554	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGAGTGCAGATCTT	NA	False	NA	-13	True	ATTAAA	-17	NA	119190846	119179191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119185232_119185396_119185530_119186298_119188704_119190653
ES.6967.2	chr11	-	1566	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	-49	-8	-49	8	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCTTTGTGGTGTCAC	NA	False	NA	-2	True	ATTAAA	-28	NA	119190964	119179180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.21	chr11	-	5981	3	NIC	ENSMUSG00000025580.16	novel	916	8	NA	NA	-9	568	intron_retention	FALSE	canonical	3	1255	junction_1	93.5	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTCTTAACTGTCC	NA	False	NA	NA	False	NA	NA	NA	119190853	119182757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119185232_119185396_119188704_119190653
ES.6967.3	chr11	-	3194	8	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	960	junction_1	178.042072532974	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190844	119179188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119186960_119188630_119188704_119190653
ES.6967.5	chr11	-	1445	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	207	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	400.895918150937	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190633	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190434
ES.6967.6	chr11	-	1981	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	407.2720982138	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190849	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119186069_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6967.7	chr11	-	1921	10	NIC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	1	0	intron_retention	FALSE	canonical	2	960	junction_1	158.339142193639	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	False	NA	-11	True	ATTAAA	-19	NA	119190843	119179189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ES.6968.1	chr11	+	4137	15	NNC	ENSMUSG00000013483.15	novel	3958	22	NA	NA	-281	-9401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.36578502309703	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAATTCAATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	119205331	119226612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119205411_119205534_119205727_119207808_119208143_119212648_119212787_119213136_119213242_119213403_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119222354_119222444_119224372_119224434_119224623
ES.6968.2	chr11	+	2956	2	NNC	ENSMUSG00000013483.15	novel	3958	22	NA	NA	-257	-26717	intron_retention	FALSE	canonical	3	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATGTTGTCTTACGTA	NA	False	NA	NA	False	TTTAAA	-15	NA	119205355	119209296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119208143_119209127
ES.6968.3	chr11	+	3770	13	NIC	ENSMUSG00000013483.15	novel	3958	22	NA	NA	49	-9401	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	2.30337916018088	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTAAATTCAATTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	119205661	119226612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119205727_119207617_119207727_119207830_119208143_119212648_119212787_119213403_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222354_119222444_119224372_119224434_119224623
ES.6968.4	chr11	+	3877	22	NNC	ENSMUSG00000013483.15	novel	3958	22	NA	NA	49	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.75121082393415	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCGGTGCCTAAG	NA	False	NA	NA	False	CATAAA	-22	NA	119205661	119236208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119205727_119207656_119207727_119207830_119208143_119212648_119212787_119213403_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119222354_119222444_119224372_119224434_119224623_119224817_119228517_119228645_119229060_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ES.6968.6	chr11	+	3162	9	NNC	ENSMUSG00000013483.15	novel	4206	23	NA	NA	9277	47	intron_retention	FALSE	canonical	0	0	junction_1	3.23795846174715	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTGAATGATTATACT	NA	False	NA	NA	False	NA	NA	NA	119224249	119236248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119224281_119224372_119224434_119224623_119224817_119228517_119228645_119229060_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ES.6969.1	chr11	+	2811	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-134	8	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	13.6358901432946	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATATTCTGTGGGTCCA	NA	False	NA	NA	False	ATTAAA	-28	NA	119246248	119271883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.10	chr11	+	3818	14	NIC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-3	-18	intron_retention	FALSE	canonical	0	0	junction_10	24.7123091768469	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGATTTATTTATTGTA	NA	False	NA	NA	False	ATTAAA	-27	NA	119246410	119271857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265732_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.11	chr11	+	7027	13	NIC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	2	-25	intron_retention	FALSE	canonical	3	19	junction_1	17.6580167503476	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAATACAAGATTTATT	NA	False	NA	NA	False	ATTAAA	-20	NA	119246415	119271850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265732_119267607_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.12	chr11	+	2065	12	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	12	-28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.2805067809159	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATTAAAATACAAGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	119246430	119271847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119261574_119261626_119263936_119263998_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.13	chr11	+	2676	17	NNC	ENSMUSG00000039908.15	novel	2752	12	NA	NA	52	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.8934662640778	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAATATTCTGTGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	119246470	119271879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246557_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.14	chr11	+	3362	14	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	317	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	26.4458808774564	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAATATTCTGTGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	119246735	119271879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119247860_119248803_119248997_119250122_119250209_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265523_119265649_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.15	chr11	+	2379	11	NIC	ENSMUSG00000039908.15	novel	2752	12	NA	NA	776	-22	intron_retention	FALSE	canonical	3	47	junction_6	12.8378347083922	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACAAGATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	119254250	119271853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268654_119270684_119270758_119271010
ES.6969.16	chr11	+	3990	6	NIC	ENSMUSG00000039908.15	novel	2752	12	NA	NA	8100	-8	intron_retention	FALSE	canonical	3	66	junction_1	10.9068785635488	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATGTGTGGATGTGTG	2621	False	NA	NA	False	ATTAAA	-42	NA	119261574	119271897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119261626_119263936_119263998_119265310_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.17	chr11	+	3775	8	ISM	ENSMUSG00000039908.15	ENSMUST00000151612.2	2752	12	8249	-4	8249	4	3prime_fragment	FALSE	canonical	3	47	junction_2	15.2596573636875	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAATATTCTGTGGG	2770	False	NA	NA	False	ATTAAA	-24	NA	119261723	119271879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.18	chr11	+	5220	6	NNC	ENSMUSG00000039908.15	novel	2752	12	NA	NA	10174	-6	intron_retention	TRUE	non_canonical	0	0	junction_1	33.6951035018443	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGGATGTGTGTG	4695	False	NA	NA	False	ATTAAA	-44	NA	119263648	119271899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119264125_119264187_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.19	chr11	+	1947	2	ISM	ENSMUSG00000039908.15	ENSMUST00000151612.2	2752	12	16179	22	16179	-22	3prime_fragment	FALSE	canonical	3	87	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACAAGATTTATTTAT	1602	False	NA	NA	False	ATTAAA	-23	NA	119269653	119271853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119270758_119271010
ES.6969.20	chr11	+	1331	3	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	16183	-28	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATTAAAATACAAGATTT	1606	False	NA	NA	False	ATTAAA	-17	NA	119269657	119271847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119270079_119270684_119270758_119271010
ES.6969.21	chr11	+	618	1	NIC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	17535	-248	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCCAAGAACT	775	False	NA	NA	False	AAAACA	-21	NA	119271009	119271627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119271000_119271600
ES.6969.3	chr11	+	3643	16	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	6	3	intron_retention	FALSE	canonical	0	0	junction_8	22.8671525701533	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATACAATATTCTGTGG	NA	False	NA	NA	False	ATTAAA	-23	NA	119246388	119271878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246462_119247633_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263899_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.4	chr11	+	5190	15	NIC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	11	1	intron_retention	FALSE	canonical	3	19	junction_1	16.7411261903866	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATACAATATTCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	119246393	119271876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119263998_119265310_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.5	chr11	+	3956	15	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-14	-13	intron_retention	FALSE	non_canonical	0	0	junction_3	21.9634436540097	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTGTATTAAA	NA	False	NA	NA	False	ATTAAA	-32	NA	119246399	119271862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250132_119250209_119253042_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.6	chr11	+	2559	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-14	-30	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	22.1760533853524	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTTATTAAAATACAAGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	119246399	119271845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265649_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.7	chr11	+	3956	15	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-14	-23	intron_retention	FALSE	canonical	3	36	junction_1	13.343958351621	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATACAAGATTTATTTA	NA	False	NA	NA	False	ATTAAA	-22	NA	119246399	119271852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.8	chr11	+	3683	15	NIC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-6	1	intron_retention	FALSE	canonical	1	2	junction_8	23.7357905935749	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATACAATATTCTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	119246407	119271876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.6969.9	chr11	+	3748	16	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	-3	4	intron_retention	FALSE	canonical	3	36	junction_1	13.8884444373331	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAATATTCTGTGGG	NA	False	NA	NA	False	ATTAAA	-24	NA	119246410	119271879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ES.697.1	chr1	+	192	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTCTTCTAAAAGCTCC	NA	False	NA	NA	False	AAGAAA	-11	NA	72184356	72184548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72184400_72184500
ES.6970.1	chr11	-	4351	8	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	-6	-3	intron_retention	TRUE	canonical	0	0	junction_1	7.0797209676365	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCAGCATCACATGG	6156	False	NA	47	True	AAGAAA	-2	NA	119246342	119234253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119237718_119238513_119238624_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6970.2	chr11	-	4236	6	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	1404	8	intron_retention	FALSE	canonical	0	0	junction_2	6.20966987850401	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTCTTTTATTAACAT	NA	False	NA	1	True	NA	NA	NA	119242121	119234299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119237664_119238513_119238624_119240365_119240448_119240802_119240960_119241227_119241379_119241749
ES.6970.3	chr11	-	4192	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	16	149	-10	-133	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCCGTTGTGCGTGTGT	6152	False	NA	NA	False	NA	NA	NA	119246346	119234456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6970.6	chr11	-	4230	8	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	9	-150	intron_retention	FALSE	canonical	0	0	junction_1	5.82745087267747	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGCCAGCTGTTGCC	6151	False	NA	NA	False	NA	NA	NA	119246347	119234473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119237718_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6970.7	chr11	-	4072	8	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	-1	-150	intron_retention	FALSE	canonical	0	0	junction_2	5.89015089373951	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGCCAGCTGTTGCC	6161	False	NA	NA	False	NA	NA	NA	119246337	119234473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119237664_119238513_119238624_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6970.8	chr11	-	3496	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	43	818	9	-802	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCAGTGGGATGTTTG	6179	False	NA	NA	False	AAGAAA	-18	NA	119246319	119235125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6970.9	chr11	-	1164	6	ISM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	1	5690	1	-2373	5prime_fragment	FALSE	canonical	2	7	junction_2	3.96988664825584	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGGTTGTTTGGAATT	6137	False	NA	NA	False	NA	NA	NA	119246361	119239997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ES.6971.1	chr11	+	183	1	Intergenic	novelGene_5637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATTCCACGTT	179	False	NA	NA	False	NA	NA	NA	119275074	119275257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119275100_119275300
ES.6972.1	chr11	+	17051	68	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-3120	65	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	45.950296158852	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGAGTTCAGTCCTTG	5910	False	NA	79	True	NA	NA	NA	119280805	119378309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119280953_119283909_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301215_119301545_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.10	chr11	+	15900	63	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	17043	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.1297355198957	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	773	False	NA	14	True	AATAAA	-14	NA	119300968	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119301179_119301545_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.11	chr11	+	14297	55	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	26964	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	42.6642432760853	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	3123	False	NA	13	True	AATAAA	-13	NA	119310889	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.13	chr11	+	14244	45	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	38631	0	intron_retention	FALSE	canonical	3	17	junction_4	38.5568165072475	251	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5494	False	NA	14	True	AATAAA	-14	NA	119322556	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.14	chr11	+	2213	1	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	40370	-51733	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGAGAAAAAGAAAAA	7233	False	NA	NA	False	NA	NA	NA	119324295	119326508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119324300_119326500
ES.6972.15	chr11	+	12076	45	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	40413	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	39.3971290958077	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	7276	False	NA	14	True	AATAAA	-14	NA	119324338	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349574_119352759_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.16	chr11	+	8436	23	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	41834	-21698	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	25.2737491618124	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGGAATGCTAGTTT	8697	False	NA	NA	False	AATAAA	-20	NA	119325759	119356543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340067_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830
ES.6972.18	chr11	+	12186	41	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-42013	0	intron_retention	FALSE	canonical	1	1	junction_6	35.1375066702235	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	9807	False	NA	14	True	AATAAA	-14	NA	119326869	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.19	chr11	+	12808	42	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-41901	0	intron_retention	FALSE	canonical	3	20	junction_3	33.4045560732147	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	9919	False	NA	14	True	AATAAA	-14	NA	119326981	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.2	chr11	+	7138	41	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-3119	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.2226167906547	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5911	False	NA	14	True	AATAAA	-14	NA	119280806	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119280953_119283909_119284023_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.21	chr11	+	10838	42	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-40440	2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	32.4189191317054	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	NA	False	NA	16	True	AATAAA	-16	NA	119328442	119378246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340067_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.23	chr11	+	8890	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-36271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.7735453703917	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	NA	False	NA	11	True	AATAAA	-11	NA	119332611	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341066_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.24	chr11	+	8376	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-35761	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	31.7649983729026	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119333121	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355945_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.25	chr11	+	7879	40	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-35278	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	30.4495789351955	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTAAGAGTCCTGTT	NA	False	NA	9	True	AATAAA	-9	NA	119333604	119378239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339692_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.26	chr11	+	4537	25	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-34925	-16845	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	15.3864568876514	168	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTCTACCATGCTGCTG	NA	False	NA	NA	False	AATAAA	-25	NA	119333957	119361396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957
ES.6972.27	chr11	+	6203	32	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-34918	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	26.0001200669604	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	NA	False	NA	14	True	AATAAA	-14	NA	119333964	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364289_119373833_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.28	chr11	+	6772	39	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-34404	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	32.1834789261427	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	NA	False	NA	11	True	AATAAA	-11	NA	119334478	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.3	chr11	+	17126	69	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-3090	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	46.8053744732886	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5940	False	NA	14	True	AATAAA	-14	NA	119280835	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119280953_119283909_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301215_119301545_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119347467_119347638_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.30	chr11	+	2209	14	ISM	ENSMUSG00000070327.15	ENSMUST00000093902.12	16716	67	56187	22135	-28770	-22135	internal_fragment	FALSE	canonical	3	58	junction_2	10.6081357635872	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCAGCGCTGTCTGGCCC	NA	False	NA	NA	False	NA	NA	NA	119340112	119356106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830
ES.6972.31	chr11	+	6009	32	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-25530	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	30.7922108615126	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	NA	False	NA	11	True	AATAAA	-11	NA	119343352	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371555_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.32	chr11	+	5816	31	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-23619	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_7	24.4044850158509	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119345263	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.33	chr11	+	5748	32	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-23614	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	30.4959013639538	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTCCTGTTTGGGCTGG	NA	False	NA	17	True	AATAAA	-17	NA	119345268	119378247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830_119378080_119378146
ES.6972.34	chr11	+	5726	30	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-21877	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	36.5112332656387	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119347005	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119347134_119349093_119349319_119349558_119349827_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356922_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.35	chr11	+	5602	29	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-19879	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.3170708810934	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119349003	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356922_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.36	chr11	+	5106	27	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-18119	-1	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	23.9603963180073	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTAAGAGTCCTGTTT	NA	False	NA	10	True	AATAAA	-10	NA	119350763	119378240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.37	chr11	+	4922	25	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-15929	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	32.0829815998036	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTAAGAGTCCTGTTTGG	NA	False	NA	12	True	AATAAA	-12	NA	119352953	119378242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374908_119376830
ES.6972.38	chr11	+	10050	20	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-15802	0	intron_retention	FALSE	non_canonical	0	0	junction_8	33.4992454539409	246	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	NA	False	NA	13	True	AATAAA	-13	NA	119353080	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119359353_119359541_119361040_119361680_119361716_119362540_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.39	chr11	+	4109	20	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-11836	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	21.901314801347	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	1465	False	NA	11	True	AATAAA	-11	NA	119357046	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.4	chr11	+	16824	68	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-3074	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	45.6636418708168	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	5956	False	NA	14	True	AATAAA	-14	NA	119280851	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119280953_119283909_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301101_119301547_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.40	chr11	+	3771	18	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-10087	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.335368050922	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	3214	False	NA	11	True	AATAAA	-11	NA	119358795	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367309_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.41	chr11	+	3490	17	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-9054	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	35.4334212820326	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	4247	False	NA	16	True	AATAAA	-16	NA	119359828	119378246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371982_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.42	chr11	+	4644	14	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-8032	0	intron_retention	FALSE	canonical	3	92	junction_2	18.5341520685304	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	5269	False	NA	13	True	AATAAA	-13	NA	119360850	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.43	chr11	+	5115	9	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-4667	0	intron_retention	FALSE	canonical	3	103	junction_1	11.9471492415555	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGAGTCCTGTTTGGG	8634	False	NA	13	True	AATAAA	-13	NA	119364215	119378243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370774_119371576_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.44	chr11	+	3277	12	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-4581	-479	intron_retention	FALSE	canonical	3	107	junction_2	13.3218269910762	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAGATCCGAGGTATT	8720	False	NA	NA	False	AGTAAA	-14	NA	119364301	119377762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.45	chr11	+	3671	10	NIC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-2154	0	intron_retention	FALSE	canonical	3	107	junction_1	12.9938256942611	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	NA	False	NA	11	True	AATAAA	-11	NA	119366728	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.46	chr11	+	2903	11	ISM	ENSMUSG00000070327.15	ENSMUST00000131035.10	16716	67	83362	-2	-1595	2	3prime_fragment	FALSE	canonical	3	107	junction_1	12.8234160815284	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTCCTGTTTGGGCTG	NA	False	NA	16	True	AATAAA	-16	NA	119367287	119378246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.47	chr11	+	4689	4	NIC	ENSMUSG00000070327.15	novel	2422	9	NA	NA	2061	1	intron_retention	FALSE	canonical	3	132	junction_1	2.35702260395516	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTAAGAGTCCTGTTTGG	NA	False	NA	12	True	AATAAA	-12	NA	119370943	119378242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.49	chr11	+	1955	5	ISM	ENSMUSG00000070327.15	ENSMUST00000172235.2	2422	9	4338	2	4338	0	3prime_fragment	FALSE	canonical	3	132	junction_2	7.77817459305202	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAAGAGTCCTGTTTG	NA	False	NA	11	True	AATAAA	-11	NA	119373220	119378241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.5	chr11	+	17037	69	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-864	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.1487271471385	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	8166	False	NA	14	True	AATAAA	-14	NA	119283061	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119283247_119283909_119284023_119293347_119293518_119296452_119296582_119299539_119300008_119300238_119300353_119300930_119301101_119301547_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.6	chr11	+	6319	26	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-228	-50108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.33156637396553	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGTTGCTGTTTGTTTC	8802	False	NA	NA	False	NA	NA	NA	119283697	119328133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119283763_119283909_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301215_119301545_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736
ES.6972.7	chr11	+	17031	67	NNC	ENSMUSG00000070327.15	novel	16716	67	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.7178635619437	256	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCCTGTTTGGGC	8822	False	NA	14	True	AATAAA	-14	NA	119283717	119378244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301215_119301545_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991_119321576_119322413_119322580_119324236_119324455_119325513_119325655_119325761_119325930_119326736_119327887_119328443_119328638_119328798_119328955_119331014_119334618_119336455_119336593_119336935_119337032_119338060_119338180_119339579_119339700_119340070_119340181_119340549_119340701_119340918_119341058_119343336_119343529_119345265_119345412_119346978_119347134_119349093_119349319_119349558_119349741_119350766_119350888_119352716_119352818_119352926_119353110_119354129_119354300_119354393_119354494_119355830_119355943_119356711_119356923_119357049_119357241_119358052_119358176_119358795_119358907_119359643_119359887_119360957_119361040_119361680_119361716_119362540_119362636_119364189_119364350_119364991_119365161_119367288_119367381_119367874_119368127_119370362_119370496_119370689_119370774_119371576_119371758_119371971_119372174_119373222_119373301_119373756_119373952_119374480_119374571_119374662_119374842_119376830
ES.6972.8	chr11	+	4227	1	Genic_Genomic	ENSMUSG00000070327.15	novel	NA	NA	NA	NA	-194	-90283	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	8836	False	NA	NA	False	NA	NA	NA	119283731	119287958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_119283700_119288000
ES.6972.9	chr11	+	5703	20	ISM	ENSMUSG00000070327.15	ENSMUST00000093902.12	16716	67	-22	55017	-22	-55017	intron_retention	FALSE	canonical	3	6	junction_2	3.51254183441339	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTATATTATTTATAT	9008	False	NA	NA	False	ATTAAA	-17	NA	119283903	119323224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119284023_119293347_119293518_119299539_119300008_119300238_119300353_119300930_119301101_119301547_119301704_119302252_119302465_119305157_119305442_119305864_119306125_119307272_119307471_119308899_119309126_119309998_119310055_119310891_119311046_119312139_119312305_119313830_119313921_119314981_119315105_119316818_119317000_119318321_119318496_119318838_119318989_119320991
ES.6973.1	chr11	-	5135	25	Antisense	novelGene_ENSMUSG00000070327.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGACACACCGGGGC	NA	False	NA	NA	False	NA	NA	NA	119327116	119283896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_119284021_119293345_119293517_119299538_119300007_119300237_119300351_119300928_119301099_119301545_119301703_119302250_119302463_119305155_119305439_119305861_119306123_119307270_119307467_119308895_119309124_119309996_119310053_119310889_119311044_119312137_119312304_119313829_119313917_119314977_119315103_119316816_119316999_119318320_119318496_119318838_119318987_119320989_119321576_119322413_119322577_119324233_119324454_119325512_119325653_119325759_119325928_119326734
ES.6973.2	chr11	-	10781	21	Antisense	novelGene_ENSMUSG00000070327.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGACACACCGGGGC	NA	False	NA	NA	False	NA	NA	NA	119327116	119283896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_119284021_119293345_119293517_119299538_119300007_119300237_119300351_119300928_119301211_119301541_119301703_119302250_119302463_119305155_119305439_119305861_119306123_119307270_119307467_119308895_119309124_119309996_119310053_119310889_119311044_119312137_119312304_119313829_119313917_119314977_119318495_119318838_119318987_119320989_119324454_119325512_119325653_119325759_119325928_119326734
ES.6973.3	chr11	-	403	1	Intergenic	novelGene_5638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGGGAAAAAGAGACAAAG	1139	False	NA	NA	False	NA	NA	NA	119298940	119298537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119298500_119298900
ES.6973.4	chr11	-	1899	1	Antisense	novelGene_ENSMUSG00000070327.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	119308090	119306191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_119306200_119308100
ES.6974.1	chr11	-	2963	4	FSM	ENSMUSG00000109408.2	ENSMUST00000208476.2	2853	4	-44	-66	2	66	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGAATCTTTTAACAG	9032	False	NA	NA	False	AATAAA	-17	NA	119382059	119351960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119354496_119355918_119356057_119379727_119379827_119381868
ES.6974.2	chr11	-	624	2	Intergenic	novelGene_5639	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAGAAACACCATACC	NA	False	NA	NA	False	NA	NA	NA	119360117	119359304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119359354_119359542
ES.6974.3	chr11	-	6038	4	NNC	ENSMUSG00000109408.2	novel	626	3	NA	NA	1719	-7299	intron_retention	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119369539	119359327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119362633_119364186_119365160_119367288_119367381_119367871
ES.6974.4	chr11	-	3739	3	FSM	ENSMUSG00000109408.2	ENSMUST00000207273.2	626	3	2	-3115	2	1369	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTGATTCTTGTGTGA	9032	False	NA	NA	False	CATAAA	-17	NA	119382059	119365508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119368958_119379727_119379827_119381868
ES.6974.5	chr11	-	3494	3	NNC	ENSMUSG00000109408.2	novel	626	3	NA	NA	1	1148	intron_retention	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAATGCCATCTTCA	9031	False	NA	NA	False	NA	NA	NA	119382060	119365729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119368958_119379727_119379827_119381893
ES.6974.6	chr11	-	5445	5	Genic_Genomic	ENSMUSG00000109408.2	novel	4381	1	NA	NA	-4765	26	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCTTTCAATGAAATGA	NA	False	NA	NA	False	NA	NA	NA	119376023	119366851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_119367379_119367872_119368125_119370360_119370494_119370687_119370773_119371575
ES.6975.1	chr11	+	7422	2	ISM	ENSMUSG00000039850.17	ENSMUST00000154370.8	883	6	-186	-1235	-9	394	intron_retention	FALSE	canonical	3	42	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	6272	False	NA	NA	False	NA	NA	NA	119382190	119397182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119382783_119390352
ES.6975.10	chr11	+	3319	9	NNC	ENSMUSG00000039850.17	novel	5126	8	NA	NA	15	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.7178891705235	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGAGTGTCTGGGGAG	6552	False	NA	6	True	ATTAAA	-17	NA	119382470	119400316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382783_119387474_119387630_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.11	chr11	+	1422	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	32	3672	-14	14	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATGGGTCACTCTTA	6569	False	NA	NA	False	AATACA	-22	NA	119382487	119398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.12	chr11	+	1483	9	NNC	ENSMUSG00000039850.17	novel	5126	8	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	18.2208671582886	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCCTGGCTTTACCCT	6583	False	NA	NA	False	AATACA	-7	NA	119382501	119398576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395630_119395721_119395916_119395994_119398027
ES.6975.13	chr11	+	4972	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	137	17	-18	-3	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	6674	False	NA	NA	False	NA	NA	NA	119382592	119402246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.14	chr11	+	3268	8	NNC	ENSMUSG00000039850.17	novel	5126	8	NA	NA	98	14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	14.9174599796647	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATGGGTCACTCTTA	6790	False	NA	NA	False	AATACA	-22	NA	119382708	119398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119395721_119395916_119395994_119398027
ES.6975.15	chr11	+	177	1	Intergenic	novelGene_5640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGTCAGTATATG	9785	False	NA	NA	False	NA	NA	NA	119385703	119385880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119385700_119385900
ES.6975.16	chr11	+	4884	8	NNC	ENSMUSG00000039850.17	novel	5126	8	NA	NA	29	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	19.0552365720378	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACTACCAACTGAATGAC	284	False	NA	NA	False	AAGAAA	-5	NA	119390365	119402271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395630_119395721_119395916_119395994_119398027
ES.6975.17	chr11	+	3382	5	ISM	ENSMUSG00000039850.17	ENSMUST00000143817.8	3101	9	8512	88	376	-88	3prime_fragment	FALSE	canonical	3	40	junction_4	3.20156211871642	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGTGTCTGGGGAGC	37	False	NA	7	True	ATTAAA	-18	NA	119390712	119400317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.18	chr11	+	4532	4	FSM	ENSMUSG00000039850.17	ENSMUST00000132015.2	778	4	313	-4067	313	19	multi-exon	FALSE	canonical	3	40	junction_3	2.86744175568088	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGACATCCCAGCTTG	45	False	NA	NA	False	AATACA	-8	NA	119393116	119402282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.2	chr11	+	1389	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	23	3658	-4	14	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATGGGTCACTCTTA	6277	False	NA	NA	False	AATACA	-22	NA	119382195	119398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.3	chr11	+	5237	10	NNC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	-3	-87	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.706651880465	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGTGTCTGGGGAGCC	6278	False	NA	8	True	ATTAAA	-19	NA	119382196	119400318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382286_119382610_119382783_119390352_119390488_119391452_119391530_119393118_119393188_119393524_119393654_119394855_119395721_119395916_119395994_119396413_119396913_119397193
ES.6975.4	chr11	+	3111	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	29	1930	1	-86	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTGTCTGGGGAGCCT	6283	False	NA	9	True	ATTAAA	-20	NA	119382201	119400319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.5	chr11	+	5083	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	29	-42	1	28	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCTTGGTTTTACTT	6283	False	NA	NA	False	AATACA	-17	NA	119382201	119402291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.6	chr11	+	1875	11	NNC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	1	411	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.0499376557634	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGCTCTGCTCTAGGG	6283	False	NA	NA	False	NA	NA	NA	119382201	119397199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119394855_119395028_119395622_119395721_119395916_119395994_119396413
ES.6975.7	chr11	+	1339	9	NNC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	-5	14	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	14.3156383022204	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCATGGGTCACTCTTA	6291	False	NA	NA	False	AATACA	-22	NA	119382209	119398591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391452_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6975.8	chr11	+	4251	7	ISM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	49	5067	7	394	intron_retention	FALSE	canonical	3	23	junction_1	8.30160627027485	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	6303	False	NA	NA	False	NA	NA	NA	119382221	119397182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524
ES.6975.9	chr11	+	3199	8	NNC	ENSMUSG00000039850.17	novel	5126	8	NA	NA	15	-91	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	15.3967926689228	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTGGAGTGTCTGGGG	6552	False	NA	4	True	ATTAAA	-15	NA	119382470	119400314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119382783_119390352_119390488_119390634_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ES.6976.1	chr11	-	158	1	Intergenic	novelGene_5641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAGCAAACAGGGC	NA	False	NA	NA	False	NA	NA	NA	119416640	119416482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119416500_119416600
ES.6977.1	chr11	-	5388	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-170	-1	-170	1	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTCATTGGATTCTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	119438749	119429543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.10	chr11	-	5548	6	NNC	ENSMUSG00000025582.5	novel	5217	5	NA	NA	-12582	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.6670175419158	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACTGTGGTCTCAT	NA	False	NA	NA	False	AGTAAA	-6	NA	119451161	119429553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119445782_119446506_119450936
ES.6977.11	chr11	-	5004	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	212	1	-212	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTACTTTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	119438578	119429756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.12	chr11	-	4483	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-166	900	-166	-900	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCCTTGAAAATACTTT	NA	False	NA	NA	False	TATAAA	-15	NA	119438745	119430444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.13	chr11	-	4087	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	1130	0	-1130	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTGTTTGCTTCTGCC	NA	False	NA	NA	False	TATAAA	-24	NA	119438579	119430674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.15	chr11	-	4147	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-170	1240	-170	-1240	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTCCCATCGACTCCG	NA	False	NA	NA	False	NA	NA	NA	119438749	119430784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.16	chr11	-	1877	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	-30	3370	-30	-3370	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGATTGTTGTAA	NA	False	NA	NA	False	NA	NA	NA	119438609	119432914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.17	chr11	-	1593	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	3	3621	3	-3621	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTTGTCCTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	119438576	119433165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6977.2	chr11	-	7316	3	ISM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	1	1	1	-1	intron_retention	FALSE	canonical	3	67	junction_1	2	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTCATTGGATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	119438578	119429545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119433521_119434007_119434188_119435417
ES.6977.3	chr11	-	5078	5	NNC	ENSMUSG00000025582.5	novel	5217	5	NA	NA	132	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.8406190841716	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTCATTGGATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	119438447	119429545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119433524_119434007_119434188_119435417_119435654_119437477_119437686_119437971
ES.6977.7	chr11	-	5326	6	NNC	ENSMUSG00000025582.5	novel	5217	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.8182875848208	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGTCTCATTGGATT	NA	False	NA	NA	False	AGTAAA	-12	NA	119438578	119429547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119433521_119434007_119434188_119435417_119435663_119436910_119437024_119437477_119437686_119437971
ES.6977.8	chr11	-	5159	6	NNC	ENSMUSG00000025582.5	novel	5217	5	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.1793811997152	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACTGTGGTCTCAT	NA	False	NA	NA	False	AGTAAA	-6	NA	119438578	119429553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119431778_119431825_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ES.6978.1	chr11	+	340	1	Intergenic	novelGene_5642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	1298	False	NA	NA	False	NA	NA	NA	119466429	119466769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119466400_119466800
ES.6979.1	chr11	+	169	1	Intergenic	novelGene_5643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTACAATAAAAAGGTTG	5582	False	NA	NA	False	NA	NA	NA	119481633	119481802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119481600_119481800
ES.698.1	chr1	-	175	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGGCTGAAGAA	7085	False	NA	NA	False	NA	NA	NA	72194235	72194060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72194100_72194200
ES.6980.1	chr11	+	6779	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-177	-8	-23	8	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTTGCCAGATGAGAAT	2127	False	NA	16	True	AATAAA	-23	NA	119493797	119790241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.13	chr11	+	6590	33	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.5671412351381	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	2161	False	NA	8	True	AATAAA	-15	NA	119493831	119790233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.14	chr11	+	6320	30	NIC	ENSMUSG00000025583.16	novel	6138	33	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	33.1226237565569	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	2168	False	NA	7	True	AATAAA	-14	NA	119493838	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119707903_119708006_119712486_119712571_119713736_119713848_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.16	chr11	+	6394	31	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	26.1454053749836	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCTGCCCTTGC	2168	False	NA	5	True	AATAAA	-12	NA	119493838	119790230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.17	chr11	+	4812	5	NNC	ENSMUSG00000025583.16	novel	3384	7	NA	NA	-1	-53334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.9966754143312	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGAATACAGTCATCTG	2169	False	NA	NA	False	NA	NA	NA	119493839	119619773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119616407_119616676
ES.6980.19	chr11	+	6695	34	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.2814460652771	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGTCGCTGCCCTTG	2175	False	NA	4	True	AATAAA	-11	NA	119493845	119790229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647088_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.2	chr11	+	5075	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-163	1682	-9	1572	multi-exon	FALSE	canonical	3	92	junction_14	15.8664073872836	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCCTCAGTGCAGCAT	2141	False	NA	NA	False	NA	NA	NA	119493811	119788551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.20	chr11	+	4295	26	ISM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-128	11890	6	2550	5prime_fragment	FALSE	canonical	3	92	junction_14	13.3462204387609	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAACAGAAAA	2176	False	NA	NA	False	NA	NA	NA	119493846	119778343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862
ES.6980.22	chr11	+	1994	8	ISM	ENSMUSG00000025583.16	ENSMUST00000125583.8	2569	13	121	24088	11	16807	5prime_fragment	FALSE	canonical	3	97	junction_7	8.79935062539114	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCCAGCTATAAAGCG	2181	False	NA	NA	False	AATAAA	-23	NA	119493851	119689914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594
ES.6980.23	chr11	+	6771	35	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	11	-3	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_14	30.9566752727847	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCTGCCCTTGC	2181	False	NA	5	True	AATAAA	-12	NA	119493851	119790230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737011_119737069_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.24	chr11	+	11922	6	ISM	ENSMUSG00000025583.16	ENSMUST00000130049.8	3384	7	31	15559	11	-15559	5prime_fragment	FALSE	canonical	3	103	junction_5	7.91454357496375	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTATTCAGTCATGGA	2181	False	NA	NA	False	ATTAAA	-18	NA	119493851	119657548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064
ES.6980.25	chr11	+	6049	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-113	658	21	-658	multi-exon	FALSE	canonical	3	92	junction_14	15.8664073872836	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTCCGTTTTCCCTGG	2191	False	NA	NA	False	NA	NA	NA	119493861	119789575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.26	chr11	+	6648	33	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	22	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	25.4287454222579	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTTGCCAGATGAGAAT	2192	False	NA	16	True	AATAAA	-23	NA	119493862	119790241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.27	chr11	+	6716	35	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	31.2800720359528	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	2216	False	NA	8	True	AATAAA	-15	NA	119493886	119790233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119644115_119644150_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.28	chr11	+	6780	35	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	54	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.2603200952381	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGCTGCCCTTGCCAGA	2224	False	NA	9	True	AATAAA	-16	NA	119493894	119790234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119701859_119701965_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.3	chr11	+	3567	22	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	-8	-12	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	24.7230464333041	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACAGTTTGTATTTGT	2142	False	NA	NA	False	ATTAAA	-13	NA	119493812	119758203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119757979
ES.6980.30	chr11	+	4210	1	Intergenic	novelGene_5645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	119506794	119511004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119506800_119511000
ES.6980.31	chr11	+	5806	34	NNC	ENSMUSG00000025583.16	novel	2355	13	NA	NA	449	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3082375335056	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCTGCCCTTGC	NA	False	NA	5	True	AATAAA	-12	NA	119547218	119790230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119547257_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.32	chr11	+	5982	35	NNC	ENSMUSG00000025583.16	novel	2355	13	NA	NA	766	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.0322447865778	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	NA	False	NA	8	True	AATAAA	-15	NA	119547535	119790233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119547690_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737011_119737069_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.33	chr11	+	5794	34	NNC	ENSMUSG00000025583.16	novel	2355	13	NA	NA	1110	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	24.9083167320524	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	NA	False	NA	7	True	AATAAA	-14	NA	119547879	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119547904_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.34	chr11	+	4174	33	ISM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	54514	1598	1719	-1598	3prime_fragment	FALSE	canonical	3	92	junction_13	16.0289959428999	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGCATTAGTTACAGA	NA	False	NA	NA	False	NA	NA	NA	119548488	119788635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.35	chr11	+	5667	32	ISM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	68128	2	15333	-2	3prime_fragment	FALSE	canonical	3	92	junction_12	16.2795556881232	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGTCGCTGCCCTTGCC	NA	False	NA	6	True	AATAAA	-13	NA	119562102	119790231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.36	chr11	+	4547	1	Intergenic	novelGene_5647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACACAACATCAAACCCA	NA	False	NA	NA	False	NA	NA	NA	119565347	119569894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119565300_119569900
ES.6980.37	chr11	+	5302	29	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	69103	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	26.7564602155312	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	NA	False	NA	8	True	AATAAA	-15	NA	119615872	119790233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.38	chr11	+	5427	30	ISM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	140716	1	-54908	-1	3prime_fragment	FALSE	canonical	3	92	junction_10	16.6456387363698	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	NA	False	NA	7	True	AATAAA	-14	NA	119634690	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.39	chr11	+	2868	1	Intergenic	novelGene_5648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	AATACA	-19	NA	119649928	119652796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119649900_119652800
ES.6980.40	chr11	+	5124	28	NNC	ENSMUSG00000025583.16	novel	2355	13	NA	NA	-513	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.3563588653602	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCTGCCCTTGC	8074	False	NA	5	True	AATAAA	-12	NA	119689085	119790230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119689170_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.41	chr11	+	4861	26	NNC	ENSMUSG00000025583.16	novel	2355	13	NA	NA	-3871	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.3168924848755	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCCCTTGCCAGATGAG	NA	False	NA	13	True	AATAAA	-20	NA	119698200	119790238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119698260_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.42	chr11	+	4785	25	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	703	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.7219044153335	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTTGCCAGATGAGA	NA	False	NA	14	True	AATAAA	-21	NA	119702774	119790239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756380_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783388_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.43	chr11	+	4726	24	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	213379	165	5831	4	3prime_fragment	FALSE	canonical	3	92	junction_4	16.7183948361654	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGCCCTTGCCAGATGA	NA	False	NA	12	True	AATAAA	-19	NA	119707902	119790237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.44	chr11	+	180	1	Intergenic	novelGene_5649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	119711391	119711571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119711400_119711600
ES.6980.45	chr11	+	4719	2	ISM	ENSMUSG00000025583.16	ENSMUST00000126802.2	3247	12	10355	39904	-1346	4309	internal_fragment	FALSE	canonical	3	119	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATGGGCAAAAGAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	119712426	119718311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119712571_119713736
ES.6980.46	chr11	+	3190	21	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	219247	2344	-2	1079	internal_fragment	FALSE	canonical	3	92	junction_2	17.1592540630413	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGCAGTTAACGACCC	NA	False	NA	NA	False	NA	NA	NA	119713770	119788058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245
ES.6980.49	chr11	+	3833	16	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	253613	170	-133	-1	3prime_fragment	FALSE	canonical	3	94	junction_6	16.7270904689236	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	NA	False	NA	7	True	AATAAA	-14	NA	119748136	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.5	chr11	+	6909	35	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.1636488617848	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	2150	False	NA	7	True	AATAAA	-14	NA	119493820	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119627227_119627390_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.50	chr11	+	470	3	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	6095	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTGCACATTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	119754364	119758214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119754481_119756377_119756497_119757979
ES.6980.51	chr11	+	2411	1	Intergenic	novelGene_5650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	119769928	119772339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119769900_119772300
ES.6980.52	chr11	+	3219	10	ISM	ENSMUSG00000025583.16	ENSMUST00000147781.8	6138	33	281020	170	27274	-1	3prime_fragment	FALSE	canonical	3	106	junction_3	16.1022964392438	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	NA	False	NA	7	True	AATAAA	-14	NA	119775543	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.53	chr11	+	2303	3	NIC	ENSMUSG00000025583.16	novel	6138	33	NA	NA	37380	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	63	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCTGCCCTTGC	NA	False	NA	5	True	AATAAA	-12	NA	119785649	119790230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119785832_119787245_119787376_119788239
ES.6980.6	chr11	+	6651	34	NNC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	1	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	25.2700383715995	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAGAGTTGAAAGGAC	2151	False	NA	-86	True	NA	NA	NA	119493821	119790139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748140_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6980.7	chr11	+	3459	21	ISM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	-153	33612	1	-15	5prime_fragment	FALSE	canonical	3	92	junction_14	9.82852990024449	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGTTTTGAACTCAAAGC	2151	False	NA	NA	False	AATAAA	-12	NA	119493821	119756621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377
ES.6980.8	chr11	+	6604	33	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	25.5560046760052	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCGCTGCCCTTGCCA	2152	False	NA	7	True	AATAAA	-14	NA	119493822	119790232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ES.6981.1	chr11	-	162	1	Intergenic	novelGene_5644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	119496739	119496577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119496600_119496700
ES.6982.1	chr11	-	8934	1	Intergenic	novelGene_5646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCCTT	NA	False	NA	NA	False	ACTAAA	-11	NA	119519885	119510951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119511000_119519900
ES.6983.1	chr11	-	490	3	Antisense	novelGene_ENSMUSG00000025583.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGCATATTTTCATTT	NA	False	NA	NA	False	NA	NA	NA	119775951	119773167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_119773434_119775629_119775768_119775865
ES.6984.1	chr11	+	1779	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	-223	1	146	-1	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTTAGTGTCTTGG	NA	False	NA	17	True	ATTAAA	-32	NA	119804412	119810373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6984.2	chr11	+	2115	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	6	4	6	-4	intron_retention	FALSE	canonical	3	311	junction_5	12.2667119564381	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTGAGTTTAGTGTCT	NA	False	NA	14	True	ATTAAA	-29	NA	119804641	119810370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809
ES.6984.3	chr11	+	3559	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	22	-2024	2	2024	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCAAAGCCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	119804657	119812398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6984.4	chr11	+	1562	8	NIC	ENSMUSG00000025371.13	novel	1557	8	NA	NA	6	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	115.377287051425	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTTAGTGTCTTGG	NA	False	NA	17	True	ATTAAA	-32	NA	119804661	119810373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119804764_119806238_119806381_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6984.5	chr11	+	1416	7	NIC	ENSMUSG00000025371.13	novel	1557	8	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	121.939420296401	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGAGTTTAGTGTCTTG	NA	False	NA	16	True	ATTAAA	-31	NA	119804664	119810372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119804764_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6984.6	chr11	+	1490	8	NNC	ENSMUSG00000025371.13	novel	1557	8	NA	NA	18	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.015172024904	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCTTGGACTTGAG	NA	False	NA	4	True	ATTAAA	-19	NA	119804673	119810360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119804764_119806253_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6984.7	chr11	+	1416	7	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	1602	14	-410	-14	3prime_fragment	FALSE	canonical	3	311	junction_4	12.5565388012249	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCTTGGACTTGAG	NA	False	NA	4	True	ATTAAA	-19	NA	119806237	119810360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ES.6985.1	chr11	-	155	1	Intergenic	novelGene_5651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	119814794	119814639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119814600_119814800
ES.6986.1	chr11	+	3304	1	Intergenic	novelGene_5652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATGAAATAGATGGTGA	NA	False	NA	NA	False	NA	NA	NA	119819056	119822360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119819100_119822400
ES.6987.1	chr11	+	2902	1	Intergenic	novelGene_5653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAGGAACAAACCAATCC	NA	False	NA	NA	False	NA	NA	NA	119823169	119826071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119823200_119826100
ES.6988.1	chr11	+	3573	1	Genic_Genomic	ENSMUSG00000086924.2	novel	NA	NA	NA	NA	17	26	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATTCCTCTCTGTTCG	NA	False	NA	NA	False	ATTAAA	-38	NA	119829353	119832926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_119829400_119832900
ES.6989.1	chr11	-	6371	2	NIC	ENSMUSG00000085207.2	novel	493	3	NA	NA	28	2794	intron_retention	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTCAATTTATGT	3436	False	NA	NA	False	AATAAA	-21	NA	119833496	119823834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119830117_119833407
ES.6989.2	chr11	-	703	3	FSM	ENSMUSG00000085207.2	ENSMUST00000129379.2	493	3	-126	-84	-126	84	multi-exon	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTGCCTGAGTCTGGCT	3282	False	NA	NA	False	AATAGA	-15	NA	119833650	119826544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119826876_119829987_119830117_119833407
ES.699.1	chr1	+	3308	1	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGTTCTGGTACTTGT	NA	False	NA	NA	False	AAGAAA	-13	NA	72217445	72220753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72217400_72220800
ES.6990.1	chr11	+	2072	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	325	-3	-28	3	multi-exon	TRUE	canonical	3	19	junction_13	8.07215976759687	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGGTCTGTTGTGCT	NA	False	NA	13	True	AATAAA	-19	NA	119833913	119897611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
ES.6990.10	chr11	+	2061	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	330	1127	-23	-705	multi-exon	FALSE	canonical	2	3	junction_13	10.9230769230769	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAGGAAAAAGGACT	NA	False	NA	NA	False	NA	NA	NA	119833918	119892320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ES.6990.11	chr11	+	3789	14	NNC	ENSMUSG00000025372.17	novel	360	5	NA	NA	-3218	-1	intron_retention	FALSE	canonical	0	0	junction_1	15.0977093760069	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGGTCTGTGCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	119847628	119893446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119847832_119847927_119848004_119848647_119848716_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ES.6990.12	chr11	+	7283	6	NIC	ENSMUSG00000025372.17	novel	4005	13	NA	NA	-3870	2	intron_retention	FALSE	canonical	3	21	junction_5	4.33589667773576	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTCTGTTGTGC	8616	False	NA	12	True	AATAAA	-18	NA	119884626	119897610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119884675_119887348_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ES.6990.13	chr11	+	2471	1	NIC	ENSMUSG00000025372.17	novel	4005	13	NA	NA	1358	-700	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAAAAAGGACTATTTT	NA	False	NA	NA	False	NA	NA	NA	119889854	119892325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_119889900_119892300
ES.6990.2	chr11	+	3191	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	326	1	-27	-1	multi-exon	FALSE	canonical	2	3	junction_13	10.9230769230769	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTGGTCTGTGCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	119833914	119893446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ES.6990.3	chr11	+	2134	15	NNC	ENSMUSG00000025372.17	novel	2442	15	NA	NA	-27	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6269540819297	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGTGTGGTCTGTT	NA	False	NA	8	True	AATAAA	-14	NA	119833914	119897606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119834075_119847927_119848004_119848647_119848716_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
ES.6990.4	chr11	+	3862	14	NNC	ENSMUSG00000025372.17	novel	2394	14	NA	NA	-27	0	intron_retention	FALSE	canonical	0	0	junction_2	16.7956742810824	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833914	119897608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119834075_119847927_119848004_119848647_119848716_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887834_119887917_119888314_119888517_119889459_119889529_119889960_119892005_119897184
ES.6990.5	chr11	+	1644	13	FSM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	327	2034	-26	-1612	multi-exon	FALSE	canonical	3	21	junction_12	7.16278964898143	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGTTTTAGGCTTCGT	NA	False	NA	NA	False	NA	NA	NA	119833915	119891413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ES.6990.6	chr11	+	7801	14	NNC	ENSMUSG00000025372.17	novel	2442	15	NA	NA	-24	0	intron_retention	FALSE	canonical	2	2	junction_13	11.1312769008675	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833917	119897608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119896905_119896940
ES.6990.7	chr11	+	2110	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	330	2	-23	-2	multi-exon	FALSE	canonical	2	2	junction_13	13.1158495799579	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGTGTGGTCTGTT	NA	False	NA	8	True	AATAAA	-14	NA	119833918	119897606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
ES.6990.8	chr11	+	2622	14	NNC	ENSMUSG00000025372.17	novel	3518	14	NA	NA	-23	-699	intron_retention	FALSE	canonical	0	0	junction_2	13.8943605264103	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAAAGGACTATTTTT	NA	False	NA	NA	False	NA	NA	NA	119833918	119892326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119834075_119847927_119848004_119848647_119848716_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ES.6990.9	chr11	+	2554	13	FSM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	330	1121	-23	-699	multi-exon	FALSE	canonical	3	21	junction_12	7.16278964898143	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAAAGGACTATTTTT	NA	False	NA	NA	False	NA	NA	NA	119833918	119892326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ES.6991.1	chr11	-	176	1	Intergenic	novelGene_5654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATCTGATATTTATA	NA	False	NA	NA	False	NA	NA	NA	119841076	119840900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119840900_119841100
ES.6992.1	chr11	+	173	1	Intergenic	novelGene_5656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAACAAAACAAAACAAAA	5211	False	NA	NA	False	NA	NA	NA	119921912	119922085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_119921900_119922100
ES.6993.1	chr11	-	5639	13	NIC	ENSMUSG00000025375.16	novel	5336	14	NA	NA	-16	-2	intron_retention	FALSE	canonical	0	0	junction_4	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAACAGCCTGTGTG	5435	False	NA	NA	False	NA	NA	NA	119937912	119898147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119899271_119900100_119900302_119900432_119900581_119900659_119903699_119904273_119904396_119904475_119904561_119906284_119906419_119906931_119907020_119907138_119907258_119907553_119907634_119909570_119909719_119912227_119912362_119937694
ES.6993.2	chr11	-	5166	14	FSM	ENSMUSG00000025375.16	ENSMUST00000103019.2	5177	14	8	3	8	-3	multi-exon	FALSE	canonical	0	0	junction_5	1.44729905555591	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAACAGCCTGTGT	5212	False	NA	NA	False	NA	NA	NA	119932600	119898148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119899271_119900100_119900302_119900432_119900581_119900659_119903253_119903548_119903699_119904273_119904396_119904475_119904561_119906284_119906419_119906931_119907020_119907138_119907258_119907553_119907634_119909570_119909719_119912227_119912362_119932558
ES.6993.3	chr11	-	168	1	Intergenic	novelGene_5655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAGA	NA	False	NA	NA	False	NA	NA	NA	119919980	119919812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119919800_119920000
ES.6993.4	chr11	-	205	1	Intergenic	novelGene_5657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAGAATCCAGCAGC	NA	False	NA	NA	False	AAGAAA	-7	NA	119922348	119922143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119922100_119922300
ES.6994.1	chr11	-	178	1	Intergenic	novelGene_5658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTTTTGAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	119944727	119944549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_119944500_119944700
ES.6995.1	chr11	+	3306	1	Antisense	novelGene_ENSMUSG00000039781.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAGGAGTTGGTAGAGG	NA	False	NA	NA	False	NA	NA	NA	119972487	119975793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_119972500_119975800
ES.6996.1	chr11	+	591	2	FSM	ENSMUSG00000078572.4	ENSMUST00000186913.2	401	2	-182	-8	-11	8	multi-exon	FALSE	canonical	3	883	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTCTCTCCCAAGGAC	NA	False	NA	14	True	TATAAA	-14	NA	119989742	119991248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119990085_119990999
ES.6996.2	chr11	+	510	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	-11	282	-11	9	multi-exon	FALSE	canonical	3	883	junction_2	30.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTCTCTCCCAAGGACA	NA	False	NA	15	True	TATAAA	-15	NA	119989742	119991249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119989892_119989973_119990085_119990999
ES.6996.3	chr11	+	490	3	NNC	ENSMUSG00000078572.4	novel	781	3	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	441.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTCTCTCCCAAGGAC	NA	False	NA	14	True	TATAAA	-14	NA	119989754	119991248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_119989881_119989969_119990085_119990999
ES.6996.4	chr11	+	777	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	1	3	1	-3	multi-exon	FALSE	canonical	3	883	junction_2	30.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTGGGCTGGAGAGAT	NA	False	NA	NA	False	AATAAA	-15	NA	119989754	119991528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_119989892_119989973_119990085_119990999
ES.6997.1	chr11	+	3691	1	Antisense	novelGene_ENSMUSG00000061306.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGACCAGAGTGGC	6399	False	NA	NA	False	AAAAAG	-8	NA	120013722	120017413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120013700_120017400
ES.6998.1	chr11	+	3052	7	Antisense	novelGene_ENSMUSG00000061306.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCTGGCACCAGCC	NA	False	NA	NA	False	NA	NA	NA	120019297	120033740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120019356_120020026_120020139_120023502_120023684_120025603_120025711_120028682_120028808_120029811_120029951_120031410
ES.6998.10	chr11	+	10594	28	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-414	0	intron_retention	FALSE	canonical	0	0	junction_1	10.0334146805009	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGTCCGGATTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	120126856	120183108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120126900_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.11	chr11	+	6870	2	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	148	26752	148	-26637	5prime_fragment	FALSE	canonical	3	15	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGCCCGTAAAACATT	NA	False	NA	NA	False	NA	NA	NA	120127672	120156356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120128084_120149897
ES.6998.12	chr11	+	9040	27	FSM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	192	1480	192	-1365	multi-exon	FALSE	canonical	0	0	junction_15	9.65652736288047	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAATATTCCAAGTT	NA	False	NA	NA	False	AAGAAA	-20	NA	120127716	120181628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.13	chr11	+	133	1	Intergenic	novelGene_5666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120138353	120138486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120138400_120138500
ES.6998.14	chr11	+	9272	24	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-17979	1	intron_retention	FALSE	canonical	0	0	junction_5	10.176699729839	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGGTCCGGATTGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	120162639	120183109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165821_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.15	chr11	+	6649	24	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-16712	-1367	intron_retention	FALSE	canonical	0	0	junction_12	9.87731930601456	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCCTGAATATTCCAAG	NA	False	NA	NA	False	AAGAAA	-18	NA	120163906	120181626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169877_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.16	chr11	+	7821	21	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-15810	1	intron_retention	FALSE	canonical	0	0	junction_9	10.4168133323008	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGGTCCGGATTGTGA	25	False	NA	NA	False	AATAAA	-22	NA	120164808	120183109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169877_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.17	chr11	+	5323	17	NIC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-13360	-1393	intron_retention	FALSE	canonical	0	0	junction_6	10.8943792847505	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAAAAATGGATGTTT	2475	False	NA	NA	False	AATGAA	-19	NA	120167258	120181600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174215_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120178931_120180133_120180371_120180502
ES.6998.18	chr11	+	4453	17	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-13323	-1888	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	11.1010979186745	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAAGGGTGGATGCGCGA	2512	False	NA	NA	False	AAAAAG	-26	NA	120167295	120181105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120167700_120169877_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.19	chr11	+	5884	18	NIC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-10630	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	11.0663303682869	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGGTCCGGATTGTGA	5205	False	NA	NA	False	AATAAA	-22	NA	120169988	120183109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502_120181013_120181253
ES.6998.2	chr11	+	7050	1	Antisense	novelGene_ENSMUSG00000061306.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCTGGCACCAGCC	NA	False	NA	NA	False	NA	NA	NA	120026690	120033740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120026700_120033700
ES.6998.20	chr11	+	5957	16	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	-10375	0	intron_retention	FALSE	canonical	0	0	junction_4	11.0722877290809	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGTCCGGATTGTG	5460	False	NA	NA	False	AATAAA	-21	NA	120170243	120183108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175627_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.22	chr11	+	3375	14	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	42734	3929	-10360	-3814	internal_fragment	FALSE	canonical	0	0	junction_4	9.10751039319364	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGAGTATACAGTAGC	5475	False	NA	NA	False	NA	NA	NA	120170258	120179179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749
ES.6998.23	chr11	+	5176	11	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	47553	5	-5541	-5	3prime_fragment	FALSE	canonical	3	17	junction_4	5.82151183113115	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTTCAGTGGTCCGGA	NA	False	NA	NA	False	AATAAA	-16	NA	120175077	120183103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.24	chr11	+	4770	9	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	48210	2	-4884	-2	3prime_fragment	FALSE	canonical	3	17	junction_2	6.25999201277446	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCAGTGGTCCGGATTG	NA	False	NA	NA	False	AATAAA	-19	NA	120175734	120183106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.25	chr11	+	2846	2	ISM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	52605	1	-489	-1	3prime_fragment	FALSE	canonical	3	30	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGTGGTCCGGATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	120180129	120183107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120180371_120180502
ES.6998.26	chr11	+	2608	1	NIC	ENSMUSG00000039741.16	novel	10712	28	NA	NA	-118	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGTCCGGATTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	120180500	120183108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120180500_120183100
ES.6998.3	chr11	+	644	2	Intergenic	novelGene_5659	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAGAATAAATTTTGT	NA	False	NA	NA	False	NA	NA	NA	120032049	120230022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120032564_120229892
ES.6998.4	chr11	+	177	1	Intergenic	novelGene_5663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGACAATAG	804	False	NA	NA	False	NA	NA	NA	120099750	120099927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120099800_120099900
ES.6998.5	chr11	+	10749	28	NNC	ENSMUSG00000039741.16	novel	10712	28	NA	NA	-33	1	intron_retention	TRUE	canonical	0	0	junction_16	9.64101890579197	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGGTCCGGATTGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	120123739	120183109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120123934_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169877_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6998.6	chr11	+	10881	27	NIC	ENSMUSG00000039741.16	novel	10712	28	NA	NA	-15	0	intron_retention	FALSE	canonical	0	0	junction_16	9.59574918215685	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGGTCCGGATTGTG	NA	False	NA	NA	False	AATAAA	-21	NA	120123757	120183108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120123934_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120178931_120180133_120180371_120180502
ES.6998.9	chr11	+	9114	28	NNC	ENSMUSG00000039741.16	novel	10712	27	NA	NA	655	-1382	intron_retention	FALSE	canonical	0	0	junction_1	10.248757828978	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGTTTAGACTTTCTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	120124427	120181611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120124500_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170321_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ES.6999.1	chr11	-	3643	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-38	-27	-38	27	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGGGCGTGGTGAGC	NA	False	NA	18	True	NA	NA	NA	119977691	119955228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.10	chr11	-	6126	20	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	37.4379634600126	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	False	NA	-9	True	AGTAAA	-27	NA	119977652	119955255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119961232_119961310_119961437_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.100	chr11	-	3991	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	5	5	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	136.396383138752	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5035	False	NA	-7	True	AATAAA	-17	NA	120042133	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.101	chr11	-	6672	14	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	-3	5	intron_retention	FALSE	canonical	2	56	junction_4	164.882062925463	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5052	False	NA	-7	True	AATAAA	-17	NA	120042116	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_120000363_120000891_120001363_120001663_120001832_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.102	chr11	-	10546	3	NNC	ENSMUSG00000061306.17	novel	928	5	NA	NA	-4973	5	intron_retention	TRUE	non_canonical	0	0	junction_2	94.5	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	8136	False	NA	-7	True	AATAAA	-17	NA	120006257	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_120005408_120005446
ES.6999.103	chr11	-	3898	15	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	186.322629996948	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTCGAGTTGGTTTAC	5032	False	NA	-8	True	AATAAA	-16	NA	120042136	119995273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019262_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.104	chr11	-	4061	16	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	210.383290422241	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTCGAGTTGGTTTAC	5042	False	NA	-8	True	AATAAA	-16	NA	120042126	119995273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.108	chr11	-	3820	14	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	189.564340141426	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTCGAGTTGGTTTAC	5020	False	NA	-8	True	AATAAA	-16	NA	120042148	119995273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.109	chr11	-	3779	13	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	158.22443623607	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTCGAGTTGGTTTA	5024	False	NA	-9	True	AATAAA	-15	NA	120042144	119995274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120041805
ES.6999.111	chr11	-	4189	17	NNC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	184.36644047928	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTCGAGTTGGTTTA	5042	False	NA	-9	True	AATAAA	-15	NA	120042126	119995274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120025846_120026017_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.114	chr11	-	3869	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	21	3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	168.641813393031	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTCGAGTTGGTTTA	5084	False	NA	-9	True	AATAAA	-15	NA	120042084	119995274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.115	chr11	-	3368	11	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	75	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	215.520416666264	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGAGTCGAGTTGGTTTA	5138	False	NA	-9	True	AATAAA	-15	NA	120042030	119995274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019332_120020026_120020139_120023502_120023686_120025605_120025705_120041805
ES.6999.117	chr11	-	3924	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	135.716334571001	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5018	False	NA	-10	True	AATAAA	-14	NA	120042150	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.118	chr11	-	6884	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	2	intron_retention	FALSE	canonical	3	189	junction_1	105.829015927792	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	4994	False	NA	-10	True	AATAAA	-14	NA	120042174	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.119	chr11	-	9849	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	147.542536239554	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5031	False	NA	-10	True	AATAAA	-14	NA	120042137	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120005408_120005446_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.12	chr11	-	4145	25	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_16	25.9020591202064	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCACCTGCTTGTC	NA	False	NA	-10	True	AGTAAA	-26	NA	119977671	119955256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.120	chr11	-	3984	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	146.592344805435	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5052	False	NA	-10	True	AATAAA	-14	NA	120042116	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019332_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.121	chr11	-	3792	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	215.601855279587	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5052	False	NA	-10	True	AATAAA	-14	NA	120042116	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119995628_119995732_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029891_120031418_120031513_120038546_120038665_120041805
ES.6999.124	chr11	-	12605	14	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	68	2	intron_retention	FALSE	canonical	3	27	junction_8	148.511868710649	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5131	False	NA	-10	True	AATAAA	-14	NA	120042037	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_120000363_120000891_120001363_120001663_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025705_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.126	chr11	-	7379	14	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	1	2	intron_retention	FALSE	canonical	3	392	junction_1	67.6175286261986	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5031	False	NA	-10	True	AATAAA	-14	NA	120042137	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.127	chr11	-	4005	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	182.651167225641	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5090	False	NA	-10	True	AATAAA	-14	NA	120042078	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001904_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.129	chr11	-	3794	14	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	207.67387382582	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5032	False	NA	-10	True	AATAAA	-14	NA	120042136	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007781_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.13	chr11	-	5188	23	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_15	34.9223755499191	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATGTCACCTGCTTGT	NA	False	NA	-11	True	AGTAAA	-25	NA	119977671	119955257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119958064_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.132	chr11	-	3246	10	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	10	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	176.194337152033	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5040	False	NA	-10	True	AATAAA	-14	NA	120042128	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.134	chr11	-	3878	15	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	12	2	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	216.521149459505	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5042	False	NA	-10	True	AATAAA	-14	NA	120042126	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.135	chr11	-	3298	12	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	42	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	164.377312383572	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5105	False	NA	-10	True	AATAAA	-14	NA	120042063	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028749_120042001
ES.6999.138	chr11	-	3976	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	5	2	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	178.625891694551	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5001	False	NA	-10	True	AATAAA	-14	NA	120042167	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120038546_120038665_120041805
ES.6999.139	chr11	-	3992	15	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	218.442690845158	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5051	False	NA	-10	True	AATAAA	-14	NA	120042117	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120025846_120025994_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.14	chr11	-	3416	26	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	44.1080491520539	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATGTCACCTGCTTGT	NA	False	NA	-11	True	AGTAAA	-25	NA	119977649	119955257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119959523_119959627_119960774_119960821_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.140	chr11	-	3617	13	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	204.267169141027	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5053	False	NA	-10	True	AATAAA	-14	NA	120042115	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120031418_120031513_120032425_120032472_120041805
ES.6999.141	chr11	-	3870	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	2	56	junction_5	139.783232330692	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGAGTCGAGTTGGTTT	5033	False	NA	-10	True	AATAAA	-14	NA	120042135	119995275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.145	chr11	-	3214	11	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	167.814778848587	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5105	False	NA	-12	True	AATAAA	-12	NA	120042063	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025705_120042013
ES.6999.146	chr11	-	4083	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	218.041891999374	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5024	False	NA	-12	True	AATAAA	-12	NA	120042144	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120025846_120026017_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.151	chr11	-	3804	14	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	245.435417938606	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5013	False	NA	-12	True	AATAAA	-12	NA	120042155	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.152	chr11	-	3870	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_12	203.287835045659	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5030	False	NA	-12	True	AATAAA	-12	NA	120042138	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120041805
ES.6999.154	chr11	-	3976	16	NNC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	214.308127081857	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5045	False	NA	-12	True	AATAAA	-12	NA	120042123	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_119999292_119999377_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.155	chr11	-	3921	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	164.601687584167	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5127	False	NA	-12	True	AATAAA	-12	NA	120042041	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000898_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.157	chr11	-	4411	6	NNC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-2407	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	250.571027854379	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	120003691	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_119999292_119999338_120000257_120000363_120000891_120001363_120001663
ES.6999.159	chr11	-	4959	16	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	35	junction_2	178.641863950071	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5027	False	NA	-12	True	AATAAA	-12	NA	120042141	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.16	chr11	-	3596	26	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.235653929785	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCATGTCACCTGCTT	NA	False	NA	-13	True	AGTAAA	-23	NA	119977654	119955259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972186_119974621_119974816_119977477
ES.6999.160	chr11	-	6794	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	-11	0	intron_retention	FALSE	canonical	3	27	junction_9	182.357520563651	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5044	False	NA	-12	True	AATAAA	-12	NA	120042124	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025705_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.161	chr11	-	3843	14	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	217.744081910624	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5041	False	NA	-12	True	AATAAA	-12	NA	120042127	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.164	chr11	-	3706	13	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	242.339924257001	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5027	False	NA	-12	True	AATAAA	-12	NA	120042141	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120038546_120038665_120041805
ES.6999.166	chr11	-	7087	2	FSM	ENSMUSG00000061306.17	ENSMUST00000146641.2	971	2	-4947	-1169	-1477	0	multi-exon	FALSE	canonical	3	392	junction_1	0	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	NA	False	NA	-12	True	AATAAA	-12	NA	120002761	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119996863_119997259
ES.6999.168	chr11	-	3970	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.373753416501	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5035	False	NA	-12	True	AATAAA	-12	NA	120042133	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996852_119997255_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.169	chr11	-	3498	11	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	226.995616697768	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5042	False	NA	-12	True	AATAAA	-12	NA	120042126	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120038546_120038665_120041805
ES.6999.17	chr11	-	3605	26	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	34.1218053449697	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119977658	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967057_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.171	chr11	-	3458	11	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	243.124433161293	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4994	False	NA	-12	True	AATAAA	-12	NA	120042174	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120041805
ES.6999.172	chr11	-	3042	8	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	197.697047142793	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5102	False	NA	-12	True	AATAAA	-12	NA	120042066	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120038546_120038665_120041805
ES.6999.175	chr11	-	2221	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	48	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	150.193548599187	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5111	False	NA	-12	True	AATAAA	-12	NA	120042057	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119995357_120000300_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.177	chr11	-	2978	7	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	236.234170545527	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5045	False	NA	-12	True	AATAAA	-12	NA	120042123	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120041805
ES.6999.178	chr11	-	3922	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	187.362752489411	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5162	False	NA	-12	True	AATAAA	-12	NA	120042006	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001904_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.18	chr11	-	3148	6	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-1038	-2	intron_retention	FALSE	canonical	3	110	junction_3	11.2498888883402	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119959921	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119956642_119956736_119956880_119957519_119957595_119957746_119958974_119959523
ES.6999.180	chr11	-	4142	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	213.854987212259	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5040	False	NA	-12	True	AATAAA	-12	NA	120042128	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120025846_120026017_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.181	chr11	-	3827	15	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	245.317495237066	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5081	False	NA	-12	True	AATAAA	-12	NA	120042087	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.182	chr11	-	4007	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	39	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_15	144.270332670611	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5102	False	NA	-12	True	AATAAA	-12	NA	120042066	119995277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038716_120041805
ES.6999.185	chr11	-	3627	13	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	39	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	201.078118457037	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCGAGTCGAGTTGG	5102	False	NA	-13	True	AATAAA	-11	NA	120042066	119995278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.186	chr11	-	3960	15	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	200.510839953294	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCGAGTCGAGTTGG	5041	False	NA	-13	True	AATAAA	-11	NA	120042127	119995278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007697_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.188	chr11	-	3295	10	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	69	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	175.335938580842	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCGAGTCGAGTTGG	5132	False	NA	-13	True	AATAAA	-11	NA	120042036	119995278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120041805
ES.6999.189	chr11	-	4013	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	147.542536239554	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	5030	False	NA	-14	True	AATAAA	-10	NA	120042138	119995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000350_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.19	chr11	-	2592	5	ISM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	19002	6	232	-2	intron_retention	FALSE	canonical	3	126	junction_3	4.9749371855331	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119958651	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736
ES.6999.190	chr11	-	2054	5	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	13551	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	232.944601783342	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	176	False	NA	-14	True	AATAAA	-10	NA	120020059	119995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120007690_120007848_120019248_120019356_120020026
ES.6999.191	chr11	-	3969	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	147.542536239554	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	5053	False	NA	-14	True	AATAAA	-10	NA	120042115	119995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001798_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.192	chr11	-	3218	9	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	201.327741195792	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	5022	False	NA	-14	True	AATAAA	-10	NA	120042146	119995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120041805
ES.6999.198	chr11	-	3810	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	29	-2	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	206.735631427616	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTCTCGAGTCGAGTTG	5092	False	NA	-14	True	AATAAA	-10	NA	120042076	119995279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.20	chr11	-	2984	10	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	364	-2	intron_retention	FALSE	canonical	0	0	junction_7	52.5970003369436	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119961369	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958974_119959523_119959627_119960774_119960821_119961114_119961232_119961310
ES.6999.201	chr11	-	2253	5	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-497	-108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	235.257704443446	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGACTTGACTTGGGCTG	NA	False	NA	-120	True	NA	NA	NA	120001781	119995385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996780_119997271_119997437_120000257_120000363_120000891_120001363_120001663
ES.6999.202	chr11	-	3251	14	ISM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	15	4506	-9	71	5prime_fragment	FALSE	canonical	3	418	junction_12	53.6579127215468	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTCAGGACTGTGATG	5011	False	NA	NA	False	ATTAAA	-15	NA	120042157	119999291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.203	chr11	-	8952	12	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	-8	67	intron_retention	FALSE	canonical	3	52	junction_11	147.939456010316	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACGGCTCAGGACTGT	5047	False	NA	NA	False	ATTAAA	-11	NA	120042121	119999295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120000363_120000891_120001363_120001663_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.204	chr11	-	1362	10	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	5	2007	combination_of_known_junctions	FALSE	canonical	3	49	junction_7	208.465291542208	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATACACAGGCCCCGAC	5035	False	NA	NA	False	AATGAA	-24	NA	120042133	120007690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120041805
ES.6999.205	chr11	-	1627	11	NNC	ENSMUSG00000061306.17	novel	1672	11	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	225.038130102434	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTTTCCTTGTCA	5047	False	NA	NA	False	AATAAA	-21	NA	120042121	120009693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120009971_120019248_120019356_120020026_120020139_120023502_120023686_120025603_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.207	chr11	-	2008	1	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	7570	-352	mono-exon	FALSE	NA	NA	NA	NA	NA	749	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120026040	120024032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120024000_120026000
ES.6999.208	chr11	-	433	1	Intergenic	novelGene_5660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2144	False	NA	NA	False	NA	NA	NA	120045024	120044591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120044600_120045000
ES.6999.209	chr11	-	174	1	Intergenic	novelGene_5661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGAGTTGACTTGG	319	False	NA	NA	False	NA	NA	NA	120046849	120046675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120046700_120046800
ES.6999.21	chr11	-	3479	24	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-18	-2	intron_retention	FALSE	canonical	0	0	junction_15	34.1552111676312	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119977671	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119958064_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.210	chr11	-	376	3	Intergenic	novelGene_5662	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGGATCCATCCACCT	NA	False	NA	NA	False	NA	NA	NA	120055104	120048255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120048448_120050377_120050458_120055000
ES.6999.23	chr11	-	4962	25	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-90447	-2	intron_retention	TRUE	non_canonical	0	0	junction_12	45.6426145601771	1173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	2577	False	NA	-15	True	AGTAAA	-21	NA	120068100	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961727_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977487_119977614_120068082
ES.6999.24	chr11	-	4925	23	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-4	-2	intron_retention	FALSE	canonical	0	0	junction_14	26.7798261926602	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119977657	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.25	chr11	-	3516	25	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-19	-2	intron_retention	FALSE	canonical	0	0	junction_8	48.7967546450467	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119977672	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119958064_119959523_119959627_119960774_119960821_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977487
ES.6999.26	chr11	-	3315	24	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	41.5341433782204	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	False	NA	-15	True	AGTAAA	-21	NA	119977654	119955261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.27	chr11	-	2644	20	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-1986	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	38.3890277491309	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTTCATGTCACCTG	NA	False	NA	-16	True	AGTAAA	-20	NA	119964834	119955262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119964798
ES.6999.28	chr11	-	4644	24	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	2893	-3	intron_retention	FALSE	canonical	0	0	junction_8	41.0152353084827	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTTCATGTCACCTG	NA	False	NA	-16	True	AGTAAA	-20	NA	119974760	119955262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119959627_119960774_119960821_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621
ES.6999.3	chr11	-	3494	25	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-19	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6536183376121	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTGTCTTTCTCTAC	NA	False	NA	-1	True	AGTAAA	-35	NA	119977672	119955247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.30	chr11	-	3756	24	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-6	-3	intron_retention	FALSE	canonical	0	0	junction_11	35.3552855918555	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTTCATGTCACCTG	NA	False	NA	-16	True	AGTAAA	-20	NA	119977659	119955262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961727_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.32	chr11	-	3247	16	ISM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	-19	4777	-19	-1118	5prime_fragment	FALSE	canonical	0	0	junction_7	30.3483479323376	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGCCTTCTGGTTTC	NA	False	NA	NA	False	TATAAA	-13	NA	119977672	119960032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.33	chr11	-	3278	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	38	-546	7	546	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGATCAGA	NA	False	NA	NA	False	ATTAAA	-10	NA	119989519	119980810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.34	chr11	-	3458	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	-682	-6	-682	6	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTGGGCTGGTTGATTT	NA	False	NA	-2	True	AATAAA	-22	NA	119990239	119981350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.36	chr11	-	5532	6	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	15	2	intron_retention	FALSE	canonical	3	85	junction_1	8.45221864364617	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACTTGGGCTGGTTG	NA	False	NA	-6	True	AATAAA	-18	NA	119989511	119981354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119983812_119984070_119984150_119984242_119985144_119986169_119987501_119987703_119988408_119989451
ES.6999.38	chr11	-	2669	12	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	23	1	intron_retention	FALSE	canonical	0	0	junction_4	32.0691401828318	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989503	119981355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119985096_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.39	chr11	-	2747	13	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	25.9368892163695	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989508	119981355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988309_119988408_119989451
ES.6999.40	chr11	-	2751	13	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	21.0797098335501	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989521	119981355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.41	chr11	-	4081	10	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	0	1	intron_retention	FALSE	canonical	3	79	junction_7	8.39311887467611	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCACTTGGGCTGGTT	NA	False	NA	-7	True	AATAAA	-17	NA	119989526	119981355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119987501_119987703_119988408_119989451
ES.6999.42	chr11	-	2725	13	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.9304625660417	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989519	119981356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984143_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.43	chr11	-	5045	4	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	197	0	intron_retention	FALSE	canonical	3	85	junction_1	7.03957069398096	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119987889	119981356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119983812_119984070_119985144_119986169_119987501_119987703
ES.6999.44	chr11	-	3290	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	4	0	intron_retention	FALSE	canonical	3	19	junction_9	21.8983376100252	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989522	119981356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987501_119987703_119988408_119989451
ES.6999.45	chr11	-	2686	13	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	30.3373394790424	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989519	119981356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987390_119987439_119987703_119987796_119988334_119988408_119989451
ES.6999.46	chr11	-	2666	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	26.3416836500756	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989525	119981356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.48	chr11	-	2703	13	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.8503975898932	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGCCACTTGGGCTGG	NA	False	NA	-9	True	AATAAA	-15	NA	119989526	119981357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985109_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.49	chr11	-	2825	13	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.9822321767951	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119989502	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986517_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.50	chr11	-	4718	7	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	5	-2	intron_retention	FALSE	canonical	3	83	junction_3	7.82623792124926	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119989521	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119985144_119986169_119986242_119986359_119988408_119989451
ES.6999.51	chr11	-	2823	4	NIC	ENSMUSG00000025377.15	novel	2566	12	NA	NA	3393	-2	intron_retention	FALSE	canonical	3	83	junction_3	2.05480466765633	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119984693	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119983812_119984070_119984150_119984242_119984357_119984516
ES.6999.52	chr11	-	3633	11	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	7	-2	intron_retention	FALSE	canonical	3	76	junction_9	8.46699474429977	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119989519	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.53	chr11	-	3970	10	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	4	-2	intron_retention	FALSE	canonical	3	76	junction_8	9.6966329907873	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119989522	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119984939_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.54	chr11	-	4144	10	NNC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	4	junction_6	27.690529646411	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGCCACTTGGGCTG	NA	False	NA	-10	True	AATAAA	-14	NA	119989525	119981358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985446_119986169_119986242_119986359_119987796_119988334_119988408_119989451
ES.6999.55	chr11	-	2806	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	22	-4	intron_retention	FALSE	canonical	3	76	junction_10	8.80176541269791	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTGTGCCACTTGGGC	NA	False	NA	-12	True	AATAAA	-12	NA	119989504	119981360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ES.6999.56	chr11	-	4358	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	10	15	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	163.712296350431	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATGTTTCCTTTACCT	5040	False	NA	NA	False	ATTAAA	-20	NA	120042128	119994770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.57	chr11	-	8262	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	2	10	intron_retention	FALSE	canonical	3	392	junction_1	64.5957845731081	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATTAATGTTTCCTT	5032	False	NA	NA	False	ATTAAA	-15	NA	120042136	119994775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120032472_120038546_120038665_120041805
ES.6999.58	chr11	-	4574	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	-10	-10	-10	10	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATTAATGTTTCCTT	4986	False	NA	NA	False	ATTAAA	-15	NA	120042182	119994775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.6	chr11	-	5555	23	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-7	6	intron_retention	FALSE	canonical	0	0	junction_15	35.2570255585985	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTGCTTGTCTTTCTCT	NA	False	NA	-3	True	AGTAAA	-33	NA	119977660	119955249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977487
ES.6999.60	chr11	-	4413	15	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-1	9	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	190.68389270931	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATTAATGTTTCCT	5021	False	NA	NA	False	ATTAAA	-14	NA	120042147	119994776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025705_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.61	chr11	-	4590	17	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-2	6	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	178.949320688848	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTAATGTTT	5053	False	NA	NA	False	ATTAAA	-11	NA	120042115	119994779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.63	chr11	-	4496	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	136.396383138752	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTGTATTAATGTTT	5023	False	NA	NA	False	ATTAAA	-11	NA	120042145	119994779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.64	chr11	-	4467	16	NNC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	211.514853694329	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGACTCATGTATGTGT	5045	False	NA	NA	False	ATTAAA	-1	NA	120042123	119994789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.66	chr11	-	7226	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	75	-7	intron_retention	FALSE	canonical	3	392	junction_1	65.4072017503908	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGACTCATGTATG	5138	False	NA	NA	False	AATATA	-13	NA	120042030	119994792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.67	chr11	-	3985	11	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	166.685452274636	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGACTCATGTATG	5031	False	NA	NA	False	AATATA	-13	NA	120042137	119994792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120041805
ES.6999.69	chr11	-	3927	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-11	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	182.440127165051	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGTTTACCTGCAGGA	5009	False	NA	0	True	AATAAA	-24	NA	120042159	119995265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120000947_120001034_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.7	chr11	-	3396	25	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-19	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	33.4380646369772	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCACCTGCTTGTCTT	NA	False	NA	-8	True	AGTAAA	-28	NA	119977672	119955254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.71	chr11	-	3892	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-9	9	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	143.204451023351	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGGTTTACCTGCA	5011	False	NA	-3	True	AATAAA	-21	NA	120042157	119995268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.72	chr11	-	4121	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	-50	483	-50	9	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGGTTTACCTGCA	4946	False	NA	-3	True	AATAAA	-21	NA	120042222	119995268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.73	chr11	-	4022	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	3	9	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGGTTTACCTGCA	4999	False	NA	-3	True	AATAAA	-21	NA	120042169	119995268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
ES.6999.74	chr11	-	4073	17	FSM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	21	484	-3	8	multi-exon	FALSE	canonical	3	16	junction_3	179.74077471111	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGAGTTGGTTTACCTGC	5017	False	NA	-4	True	AATAAA	-20	NA	120042151	119995269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.76	chr11	-	4122	17	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	0	7	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	178.949320688848	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGAGTTGGTTTACCTG	5030	False	NA	-5	True	AATAAA	-19	NA	120042138	119995270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.78	chr11	-	3936	16	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	5	7	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	207.928898103815	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGAGTTGGTTTACCTG	5035	False	NA	-5	True	AATAAA	-19	NA	120042133	119995270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
ES.6999.79	chr11	-	3838	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	7	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	198.136913992296	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGAGTTGGTTTACCTG	5023	False	NA	-5	True	AATAAA	-19	NA	120042145	119995270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120041805
ES.6999.8	chr11	-	3747	27	NNC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	39.5992685665521	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	False	NA	-9	True	AGTAAA	-27	NA	119977673	119955255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119969214_119969364_119972069_119972165_119974621_119974816_119977477
ES.6999.84	chr11	-	3900	15	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	44	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	200.134406367933	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTCGAGTTGGTTTACCT	5107	False	NA	-6	True	AATAAA	-18	NA	120042061	119995271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029948_120031418_120031513_120038546_120038665_120041805
ES.6999.85	chr11	-	3403	12	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	44	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	163.682771197145	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTCGAGTTGGTTTACCT	5107	False	NA	-6	True	AATAAA	-18	NA	120042061	119995271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019332_120029818_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.86	chr11	-	3851	14	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	193.59042961332	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5040	False	NA	-7	True	AATAAA	-17	NA	120042128	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029948_120031418_120031513_120041805
ES.6999.87	chr11	-	3474	11	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	4	5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	206.59922555518	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5059	False	NA	-7	True	AATAAA	-17	NA	120042109	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120041805
ES.6999.9	chr11	-	4108	25	NIC	ENSMUSG00000039781.15	novel	3578	26	NA	NA	12	0	intron_retention	FALSE	canonical	0	0	junction_16	26.2899167404962	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	False	NA	-9	True	AGTAAA	-27	NA	119977641	119955255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119955536_119955610_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ES.6999.92	chr11	-	3642	12	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	1	5	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_6	243.764213402085	860	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5031	False	NA	-7	True	AATAAA	-17	NA	120042137	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120023502_120023686_120025605_120025705_120028682_120028808_120029811_120029956_120031418_120031513_120041805
ES.6999.93	chr11	-	3927	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	187.852213406264	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	4994	False	NA	-7	True	AATAAA	-17	NA	120042174	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_119996863_119997259_119997437_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.6999.98	chr11	-	4105	16	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	147.319365853765	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGTCGAGTTGGTTTACC	5030	False	NA	-7	True	AATAAA	-17	NA	120042138	119995272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001904_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ES.7.1	chr1	-	156	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4756945	4756789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4756800_4756900
ES.70.1	chr1	+	169	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	9861015	9861184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9861000_9861200
ES.700.1	chr1	-	3609	7	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	66	214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	303.807184832017	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTTATATTTCTGAT	4288	False	NA	1	True	ATTAAA	-28	NA	72251400	72198386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72235070_72236101_72237242_72237390_72251175
ES.700.11	chr1	-	2321	5	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	29	204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	266.160078712041	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGAGTGTGTGTTA	4251	False	NA	-9	True	ATTAAA	-18	NA	72251437	72198396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251313
ES.700.12	chr1	-	2379	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	-38	-57	-38	57	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGAAATTGTCTGTGT	4184	False	NA	17	True	NA	NA	NA	72251504	72198543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
ES.700.14	chr1	-	3536	4	NIC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	46	-4	intron_retention	FALSE	canonical	3	598	junction_1	52.7278126060832	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTGTACTGTTTTAA	4268	False	NA	-44	True	AATAAA	-19	NA	72251420	72198604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72201645_72203230_72203322_72231201_72231362_72251175
ES.700.15	chr1	-	2072	4	NIC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	48	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	277.306088405334	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTGTACTGTTTTAA	4270	False	NA	-44	True	AATAAA	-19	NA	72251418	72198604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72200179_72201480_72201645_72203230_72203322_72251175
ES.700.17	chr1	-	3289	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	20	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	294.607263997343	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATGTTGTACTGTTTTA	4242	False	NA	-45	True	AATAAA	-18	NA	72251446	72198605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72235070_72236101_72251175
ES.700.18	chr1	-	2176	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	33	-32	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	261.207197450606	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAATAAAATAAACAAAA	4255	False	NA	-72	True	NA	NA	NA	72251433	72198632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175_72251349_72251391
ES.700.2	chr1	-	2627	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	-136	-207	-136	207	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGTGTGTGTTATAT	4086	False	NA	-6	True	ATTAAA	-21	NA	72251602	72198393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
ES.700.20	chr1	-	2012	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	45	227	45	-227	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATGTCCCCTGTTCA	4267	False	NA	NA	False	TTTAAA	-13	NA	72251421	72198827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
ES.700.21	chr1	-	2786	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTCGTTCATTTTTCCA	6432	False	NA	NA	False	NA	NA	NA	72222572	72219786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72219800_72222600
ES.700.3	chr1	-	2402	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	45	207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	261.207197450606	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGTGTGTGTTATAT	4267	False	NA	-6	True	ATTAAA	-21	NA	72251421	72198393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175_72251347_72251390
ES.700.6	chr1	-	2419	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	26	207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	261.207197450606	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGTGTGTGTTATAT	4248	False	NA	-6	True	ATTAAA	-21	NA	72251440	72198393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175_72251352_72251397
ES.700.7	chr1	-	2613	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	8	207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	300.45272506669	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGTGTGTGTTATAT	4230	False	NA	-6	True	ATTAAA	-21	NA	72251458	72198393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72231896_72232027_72251175
ES.700.8	chr1	-	3584	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	-63	207	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	294.607263997343	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGAGTGTGTGTTATAT	4159	False	NA	-6	True	ATTAAA	-21	NA	72251529	72198393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72235070_72236101_72251175
ES.700.9	chr1	-	2413	6	NNC	ENSMUSG00000039395.9	novel	2284	5	NA	NA	21	206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	261.207197450606	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGAGTGTGTGTTATA	4243	False	NA	-7	True	ATTAAA	-20	NA	72251445	72198394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175_72251348_72251403
ES.7000.1	chr11	-	2010	1	Genic_Genomic	ENSMUSG00000075389.4	novel	NA	NA	NA	NA	-116	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTTTCTCTCTGGC	6027	False	NA	0	True	AATAAA	-18	NA	120080794	120078784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120078800_120080800
ES.7001.1	chr11	-	174	1	Intergenic	novelGene_5664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTGTGGCTAGAA	NA	False	NA	NA	False	NA	NA	NA	120102443	120102269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120102300_120102400
ES.7002.1	chr11	-	5820	1	Intergenic	novelGene_5665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120118697	120112877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120112900_120118700
ES.7002.2	chr11	-	5136	1	Genic_Genomic	ENSMUSG00000043993.7	novel	NA	NA	NA	NA	53	3405	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACTGAGCAGCAGCGCC	NA	False	NA	NA	False	AATAAA	-15	NA	120122358	120117222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120117200_120122400
ES.7002.3	chr11	-	590	3	NNC	ENSMUSG00000043993.7	novel	1588	2	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCAGTATTGCTACC	NA	False	NA	0	True	NA	NA	NA	120122397	120120628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120120760_120121742_120122125_120122320
ES.7002.4	chr11	-	1789	1	Genic_Genomic	ENSMUSG00000043993.7	novel	NA	NA	NA	NA	-6	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGCAGTATTGCTACC	NA	False	NA	0	True	NA	NA	NA	120122417	120120628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120120600_120122400
ES.7002.5	chr11	-	667	2	FSM	ENSMUSG00000043993.7	ENSMUST00000139014.2	1588	2	-14	935	-14	-935	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	120122425	120121562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120122125_120122320
ES.7003.1	chr11	-	2342	1	Genic_Genomic	ENSMUSG00000085501.2	novel	NA	NA	NA	NA	-1411	42	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTCTTTGTGCTCGA	8343	False	NA	NA	False	AATAAA	-12	NA	120128359	120126017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120126000_120128400
ES.7004.1	chr11	+	189	1	Intergenic	novelGene_5667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTGATCCTGTCACCT	1748	False	NA	16	True	NA	NA	NA	120235699	120235888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120235700_120235900
ES.7005.1	chr11	+	2465	1	NIC	ENSMUSG00000043644.5	novel	619	2	NA	NA	48	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGCTCAACGTCTAAA	3043	False	NA	NA	False	AATAAA	-19	NA	120239551	120242016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120239600_120242000
ES.7005.2	chr11	+	565	2	FSM	ENSMUSG00000043644.5	ENSMUST00000143813.2	619	2	54	0	54	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGCTCAACGTCTAAA	3049	False	NA	NA	False	AATAAA	-19	NA	120239557	120242016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120239689_120241582
ES.7006.1	chr11	-	2933	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	-979	-2	-979	2	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTTCTGGTTTGGCA	NA	False	NA	-19	True	AATAAA	-20	NA	120240347	120236513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.12	chr11	-	1892	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2662.86848342159	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATTGTTTTTCTGGTTT	NA	False	NA	-23	True	AATAAA	-16	NA	120239318	120236517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238694_120238794_120238924_120239250
ES.7006.13	chr11	-	1875	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2662.86848342159	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATTGTTTTTCTGGTT	NA	False	NA	-24	True	AATAAA	-15	NA	120239318	120236518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238678_120238794_120238924_120239250
ES.7006.15	chr11	-	1883	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2557.96023424916	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATTGTTTTTCTGGTT	NA	False	NA	-24	True	AATAAA	-15	NA	120239318	120236518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238908_120239250
ES.7006.16	chr11	-	1946	7	FSM	ENSMUSG00000062825.16	ENSMUST00000131103.9	1189	7	-5	-752	1	-2	multi-exon	FALSE	canonical	3	13	junction_4	2986.4483365139	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCATTGTTTTTCTGGTT	NA	False	NA	-24	True	AATAAA	-15	NA	120239320	120236518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238317_120238363_120238461_120238702_120238794_120238924_120239250
ES.7006.18	chr11	-	1988	5	NIC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	5636	junction_3	466.441046650056	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACCATTGTTTTTCTG	NA	False	NA	-27	True	AATAAA	-12	NA	120239318	120236521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237360_120237462_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.19	chr11	-	2278	4	NIC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	0	-5	intron_retention	FALSE	canonical	3	6581	junction_1	132.032824201661	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACCATTGTTTTTCTG	NA	False	NA	-27	True	AATAAA	-12	NA	120239321	120236521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237360_120237462_120237645_120237736_120238924_120239250
ES.7006.2	chr11	-	1908	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2662.86848342159	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	False	NA	-20	True	AATAAA	-19	NA	120239322	120236514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238793_120238924_120239250
ES.7006.20	chr11	-	1883	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2629.17728576831	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACCATTGTTTTTCTG	NA	False	NA	-27	True	AATAAA	-12	NA	120239314	120236521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238470_120238702_120238794_120238924_120239250
ES.7006.21	chr11	-	1887	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2598.58310623309	2202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGACCATTGTTTTTCT	NA	False	NA	-28	True	AATAAA	-11	NA	120239318	120236522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237352_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.22	chr11	-	2187	5	NIC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	1	-6	intron_retention	FALSE	canonical	3	13	junction_2	2828.02285174643	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGACCATTGTTTTTCT	NA	False	NA	-28	True	AATAAA	-11	NA	120239320	120236522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237645_120237736_120238363_120238461_120238702_120238794_120238924_120239250
ES.7006.23	chr11	-	1930	7	NNC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3142.85458089722	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGACCATTGTTTTT	NA	False	NA	-30	True	AATAAA	-9	NA	120239314	120236524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237637_120237732_120238176_120238317_120238363_120238461_120238702_120238794_120238924_120239250
ES.7006.25	chr11	-	1779	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	48	125	1	-124	multi-exon	FALSE	canonical	3	5636	junction_4	454.292680988809	2201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGGTTTTTTGTACTC	NA	False	NA	NA	False	NA	NA	NA	120239320	120236640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.26	chr11	-	1316	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	49	587	2	105	multi-exon	FALSE	canonical	3	5636	junction_4	454.292680988809	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATTTGTCCTTGAA	NA	False	NA	NA	False	NA	NA	NA	120239319	120237102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.4	chr11	-	2020	6	NNC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2557.96023424916	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239233	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239046
ES.7006.5	chr11	-	1570	7	NNC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2433.92299362344	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239320	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120236814_120237146_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ES.7006.6	chr11	-	2802	1	FSM	ENSMUSG00002076664.1	ENSMUST00020182918.1	84	1	-1673	-1045	-1673	1045	mono-exon	FALSE	NA	NA	NA	NA	NA	2202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239318	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120236500_120239300
ES.7006.7	chr11	-	2189	5	NIC	ENSMUSG00000062825.16	novel	1952	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	5636	junction_3	499.114465829232	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239320	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237360_120237462_120237645_120237736_120238702_120238794_120238924_120239250
ES.7006.8	chr11	-	2091	6	NIC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	2624.0529415391	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239321	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237360_120237462_120237645_120237736_120238363_120238461_120238702_120238794_120238924_120239250
ES.7006.9	chr11	-	2278	4	NIC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	5636	junction_2	536.051199876363	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239317	120236516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120237360_120237462_120238702_120238794_120238924_120239250
ES.7007.1	chr11	+	165	1	Intergenic	novelGene_5668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGATGCAGCCG	NA	False	NA	NA	False	NA	NA	NA	120247950	120248115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120248000_120248100
ES.7008.1	chr11	+	781	5	NNC	ENSMUSG00000025380.3	novel	591	4	NA	NA	-1194	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCGTGGGCTCAAGCT	3120	False	NA	NA	False	ATTAAA	-13	NA	120256173	120258993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120256244_120257466_120257624_120258062_120258185_120258482_120258651_120258729
ES.7009.1	chr11	-	3669	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	29	-505	0	-2	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTGTCTGCTGGGCTGC	NA	False	NA	NA	False	CATAAA	-18	NA	120269561	120259882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.10	chr11	-	4314	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	11	0	intron_retention	FALSE	canonical	1	16	junction_4	21.0237960416286	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269579	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120268488_120269153_120269273_120269367
ES.7009.11	chr11	-	3674	6	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	985	0	intron_retention	FALSE	canonical	1	7	junction_4	25.6951357264366	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120268315	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120264707_120265478_120266242
ES.7009.12	chr11	-	6574	5	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	63	junction_4	5.61248608016091	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269560	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120265478_120266242
ES.7009.13	chr11	-	4814	6	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	7	junction_4	29.3216643456677	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTGTGTTGTGCTC	NA	False	NA	-5	True	NA	NA	NA	120269572	120260389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120264707_120268488_120269367
ES.7009.14	chr11	-	3037	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	16	junction_4	21.8274483162829	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTGTGTTGTGCTC	NA	False	NA	-5	True	NA	NA	NA	120269555	120260389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269367
ES.7009.15	chr11	-	5051	8	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	8	-2	intron_retention	FALSE	canonical	1	16	junction_4	22.2417148068898	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTGTGTTGTGCTC	NA	False	NA	-5	True	NA	NA	NA	120269553	120260389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120268488_120269153_120269273_120269367
ES.7009.17	chr11	-	4924	7	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	-5	-6	intron_retention	FALSE	canonical	1	7	junction_4	26.3865496039175	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGCCTCTGTGTTGT	NA	False	NA	-9	True	NA	NA	NA	120269567	120260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120264707_120268488_120269153_120269273_120269367
ES.7009.18	chr11	-	4964	7	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1	-6	intron_retention	FALSE	canonical	1	16	junction_4	24.5696289484938	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGCCTCTGTGTTGT	NA	False	NA	-9	True	NA	NA	NA	120269589	120260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120268488_120269367
ES.7009.2	chr11	-	3555	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	30	-392	1	-115	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCCAAGGCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	120269560	120259995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.20	chr11	-	4674	8	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1	-7	intron_retention	FALSE	canonical	3	28	junction_7	15.0969655012833	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTCTGCCTCTGTGTTG	NA	False	NA	-10	True	NA	NA	NA	120269560	120260394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.21	chr11	-	2620	1	Genic_Genomic	ENSMUSG00000025384.16	novel	NA	NA	NA	NA	-5	20	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	AAAACA	-32	NA	120269595	120266975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120267000_120269600
ES.7009.22	chr11	-	1824	3	FSM	ENSMUSG00000025384.16	ENSMUST00000148520.2	1779	3	-25	-20	1	20	multi-exon	FALSE	canonical	3	28	junction_2	20.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	AAAACA	-32	NA	120269560	120266975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120268488_120269153_120269273_120269367
ES.7009.23	chr11	-	1678	2	ISM	ENSMUSG00000025384.16	ENSMUST00000154826.2	2934	4	29	3124	2	20	5prime_fragment	FALSE	canonical	3	20	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCTTAGAAGGAAAGACCCA	NA	False	NA	NA	False	AAAACA	-32	NA	120269533	120266975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120268488_120269367
ES.7009.3	chr11	-	3202	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	-6	-3	-6	3	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTGTGCTCTGTGT	NA	False	NA	0	True	NA	NA	NA	120269596	120260384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.4	chr11	-	3181	10	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	26.4733735321519	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTTGTGCTCTGT	NA	False	NA	-2	True	NA	NA	NA	120269560	120260386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264087_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.6	chr11	-	3162	10	NNC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	26.4733735321519	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269567	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264715_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ES.7009.7	chr11	-	5045	7	ISM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	41	0	12	0	intron_retention	FALSE	canonical	1	16	junction_4	20.7478245178193	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269549	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242
ES.7009.8	chr11	-	3778	6	NNC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	1836	0	intron_retention	FALSE	canonical	0	0	junction_4	28.3788653754867	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120267464	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263106_120263932_120264070_120264707
ES.7009.9	chr11	-	5802	7	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	28	junction_6	16.2420920929404	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269549	120260387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120265478_120266242_120268488_120269153_120269273_120269367
ES.701.1	chr1	+	1855	2	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTGTGACTGAA	NA	False	NA	NA	False	AATAAA	-22	NA	72256195	72258309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72256516_72256774
ES.7010.1	chr11	+	1948	1	Antisense	novelGene_ENSMUSG00000039703.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAAGGTGAAGCCCTAGC	NA	False	NA	NA	False	AAAACA	-13	NA	120269929	120271877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120269900_120271900
ES.7011.1	chr11	+	4750	2	Antisense	novelGene_ENSMUSG00000039703.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAAAGAAGGCTCA	1712	False	NA	NA	False	NA	NA	NA	120276251	120295767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120280265_120295030
ES.7012.1	chr11	+	261	1	Intergenic	novelGene_5669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCTGTCCATCTTAGT	NA	False	NA	NA	False	NA	NA	NA	120315059	120315320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120315100_120315300
ES.7013.15	chr11	-	3967	14	NNC	ENSMUSG00000039703.16	novel	4025	16	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	179.575337324333	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	-8	True	AATAAA	-16	NA	120328501	120271195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274367_120299458_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328061_120328106_120328324
ES.7013.16	chr11	-	4019	16	NIC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	114.989390814979	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTGCTCCCAGTGCAT	NA	False	NA	-9	True	AATAAA	-15	NA	120328505	120271196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.18	chr11	-	5216	16	NIC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	47	-1	intron_retention	FALSE	canonical	3	355	junction_9	43.1833301170718	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTGCTCCCAGTGCAT	NA	False	NA	-9	True	AATAAA	-15	NA	120328487	120271196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120273453_120274122_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.19	chr11	-	4071	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	110.602893271379	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCTGCTCCCAGTGCA	NA	False	NA	-10	True	AATAAA	-14	NA	120328519	120271197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312335_120319349_120319463_120323873_120323955_120328324
ES.7013.2	chr11	-	4682	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	12	-573	12	573	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTTATTTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	120328522	120270622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.21	chr11	-	3987	16	FSM	ENSMUSG00000039703.16	ENSMUST00000103017.4	4025	16	34	4	34	-4	multi-exon	FALSE	canonical	1	2	junction_3	114.245816845374	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTGTCCTGCTCCCAGTG	NA	False	NA	-12	True	AATAAA	-12	NA	120328500	120271199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.22	chr11	-	3756	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	-46	411	-46	-411	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTGTTCAGTAATG	NA	False	NA	8	True	AAGAAA	-32	NA	120328580	120271606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.23	chr11	-	3641	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	55	-421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	145.716106157658	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGAGTTACTCTTTG	NA	False	NA	-2	True	AAGAAA	-22	NA	120328479	120271616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274130_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309066_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.24	chr11	-	4886	16	NIC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	-44	-422	intron_retention	FALSE	canonical	3	355	junction_9	43.1833301170718	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTTTGAGTTACTCTTT	NA	False	NA	-3	True	AAGAAA	-21	NA	120328578	120271617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120273453_120274122_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.28	chr11	-	3556	16	NIC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	29	-423	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	112.342808700275	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328505	120271618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120323873_120323955_120328324
ES.7013.29	chr11	-	3586	16	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	13	-423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.780733519722	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328521	120271618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309066_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.30	chr11	-	3647	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	48	-423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	111.474702847776	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328486	120271618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307200_120309066_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.32	chr11	-	4642	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	34	-423	intron_retention	FALSE	non_canonical	0	0	junction_1	110.600050152565	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328500	120271618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272930_120273094_120273453_120274122_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.33	chr11	-	3577	16	FSM	ENSMUSG00000039703.16	ENSMUST00000103017.4	4025	16	24	424	24	-424	multi-exon	FALSE	canonical	1	2	junction_3	114.245816845374	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328510	120271619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.37	chr11	-	3707	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	34	-424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	139.286814196451	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328500	120271619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328061_120328106_120328324
ES.7013.38	chr11	-	3502	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	30	-424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.175239093524	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328504	120271619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272930_120273094_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.4	chr11	-	4576	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	-21	-434	-21	434	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTTGTTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-34	NA	120328555	120270761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.40	chr11	-	3392	15	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	47	-424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.579348016742	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328487	120271619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328061_120328106_120328324
ES.7013.41	chr11	-	1908	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	47	-425	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.077653698423	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGGTTTTGAGTTACTC	NA	False	NA	-6	True	AAGAAA	-18	NA	120328487	120271620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120271758_120274168_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.43	chr11	-	3556	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	60	-426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	107.422937494746	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGGTTTTGAGTTACT	NA	False	NA	-7	True	AAGAAA	-17	NA	120328474	120271621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328403
ES.7013.44	chr11	-	3625	17	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	37	-426	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	110.602893271379	528	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGGTTTTGAGTTACT	NA	False	NA	-7	True	AAGAAA	-17	NA	120328497	120271621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312335_120319349_120319463_120323873_120323955_120328324
ES.7013.45	chr11	-	3511	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	18	-427	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	108.175239093524	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATGGTTTTGAGTTAC	NA	False	NA	-8	True	AAGAAA	-16	NA	120328516	120271622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272921_120273085_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.46	chr11	-	2604	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	22	1495	22	453	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTACCTCTGCTCCTTC	NA	False	NA	NA	False	GATAAA	-21	NA	120328512	120272690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.47	chr11	-	2396	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	11	399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.175239093524	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACTTTTATTTATTGT	NA	False	NA	NA	False	NA	NA	NA	120328523	120272744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272930_120273094_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.48	chr11	-	2426	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	13	1682	13	266	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTGTGGGGCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	120328521	120272877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.49	chr11	-	1874	13	NNC	ENSMUSG00000039703.16	novel	842	8	NA	NA	26	6632	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	124.923393192255	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAACAACTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120328508	120288458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120288883_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.5	chr11	-	4439	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	-49	434	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.175239093524	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTTGTTTTTTGTTT	NA	False	NA	NA	False	AATAAA	-34	NA	120328583	120270761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272930_120273094_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.50	chr11	-	3418	7	NIC	ENSMUSG00000039703.16	novel	4025	16	NA	NA	11	616	intron_retention	FALSE	canonical	3	355	junction_1	53.7796429887741	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTATAAGATCATCCT	NA	False	NA	NA	False	NA	NA	NA	120328523	120303849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120304566_120307082_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.51	chr11	-	3056	1	Intergenic	novelGene_5670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	458	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120318958	120315902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120315900_120319000
ES.7013.6	chr11	-	4359	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	30	-268	30	268	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTGGGTTAAAGTTG	NA	False	NA	NA	False	GATAAA	-14	NA	120328504	120270927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.7	chr11	-	4134	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	-3	-10	-3	10	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGCATTGTTCCTGTGC	NA	False	NA	2	True	AATAAA	-26	NA	120328537	120271185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7013.8	chr11	-	3915	16	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	72	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	147.827467001231	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCATTGTTCCTGT	NA	False	NA	0	True	AATAAA	-24	NA	120328462	120271187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309066_120309166_120309894_120309944_120312190_120312335_120323873_120323955_120328324
ES.7013.9	chr11	-	3930	18	NNC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	33	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.175239093524	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCATTGTTCCTGT	NA	False	NA	0	True	AATAAA	-24	NA	120328501	120271187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120272925_120273090_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ES.7014.1	chr11	+	177	1	Intergenic	novelGene_5671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120346730	120346907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120346700_120346900
ES.7015.1	chr11	-	782	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	28	3	28	-3	multi-exon	FALSE	canonical	3	42	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGCAGGGGCTTTTG	987	False	NA	-9	True	AATAAA	-15	NA	120348866	120347434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120347989_120348638
ES.7015.2	chr11	-	1432	1	NIC	ENSMUSG00000039670.3	novel	813	2	NA	NA	28	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATGCAGGGGCTTTTG	987	False	NA	-9	True	AATAAA	-15	NA	120348866	120347434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120347400_120348900
ES.7016.1	chr11	+	2822	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	-37	-7	-37	7	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTCTTGTTTCTGGTG	171	False	NA	NA	False	AATAAA	-27	NA	120348903	120355191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ES.7016.11	chr11	+	4225	4	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	99	junction_2	18.6726180988812	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	236	False	NA	NA	False	AATAAA	-20	NA	120348968	120355184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120349105_120349437_120351091_120352541_120352625_120352831
ES.7016.13	chr11	+	2782	7	NNC	ENSMUSG00000049957.15	novel	1074	3	NA	NA	142	-9	intron_retention	FALSE	canonical	0	0	junction_1	61.129416450311	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCCATCAATGAGAA	421	False	NA	NA	False	AATAAA	-10	NA	120349153	120355174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120349186_120349437_120349572_120350535_120350682_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ES.7016.2	chr11	+	1807	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	-9	980	-9	846	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGGGCCGTTGCTCTC	199	False	NA	NA	False	ATTAAA	-14	NA	120348931	120354204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ES.7016.3	chr11	+	1472	7	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-5	-9	intron_retention	FALSE	canonical	0	0	junction_6	47.8179417745636	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCCATCAATGAGAA	214	False	NA	NA	False	AATAAA	-10	NA	120348946	120355174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090_120353367_120354656
ES.7016.4	chr11	+	2567	7	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-4	-9	intron_retention	FALSE	canonical	0	0	junction_6	47.8179417745636	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCCATCAATGAGAA	215	False	NA	NA	False	AATAAA	-10	NA	120348947	120355174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090_120354832_120355025
ES.7016.5	chr11	+	4054	5	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	99	junction_2	16.2230545829076	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGAGAACATTCTTGT	227	False	NA	NA	False	AATAAA	-19	NA	120348959	120355183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120349105_120349437_120351091_120352541_120352625_120352831_120352912_120353090
ES.7016.6	chr11	+	3366	6	NNC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_3	52.3694567472301	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	227	False	NA	NA	False	AATAAA	-20	NA	120348959	120355184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120349105_120349437_120349572_120350867_120351091_120351934_120352625_120352831_120352912_120353090
ES.7016.7	chr11	+	2153	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	21	604	-2	-603	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGATTGTTTTCTGAG	229	False	NA	5	True	ATTAAA	-19	NA	120348961	120354580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ES.7016.8	chr11	+	2707	4	NIC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	4	junction_2	63.2525800966956	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGAGAACATTCTTGT	234	False	NA	NA	False	AATAAA	-19	NA	120348966	120355183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120349105_120349437_120349572_120352541_120352625_120352831
ES.7016.9	chr11	+	2785	6	NNC	ENSMUSG00000049957.15	novel	2778	6	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	50.726718797888	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGAGAACATTCTTGT	236	False	NA	NA	False	AATAAA	-19	NA	120348968	120355183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353054
ES.7017.1	chr11	-	179	1	Antisense	novelGene_ENSMUSG00000049957.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGAACTT	NA	False	NA	NA	False	NA	NA	NA	120349957	120349778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120349800_120350000
ES.7018.1	chr11	-	3524	2	Antisense	novelGene_ENSMUSG00000049957.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTAACCCCCCCCCCCCC	NA	False	NA	NA	False	NA	NA	NA	120355145	120351414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120352629_120352835
ES.7018.11	chr11	-	1346	5	NNC	ENSMUSG00000057594.13	novel	911	5	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.9048658414922	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTG	NA	False	NA	NA	False	CATAAA	-10	NA	120358305	120355707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358065_120358186
ES.7018.12	chr11	-	2166	2	ISM	ENSMUSG00000057594.13	ENSMUST00000143233.8	2206	3	145	17	3	-17	intron_retention	FALSE	canonical	3	167	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	CATAAA	-9	NA	120358288	120355708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120357594_120358007
ES.7018.14	chr11	-	2029	3	NNC	ENSMUSG00000057594.13	novel	2206	3	NA	NA	-6	-28	intron_retention	FALSE	non_canonical	0	0	junction_2	83.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120358285	120355719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120357594_120358007_120358065_120358187
ES.7018.15	chr11	-	724	5	NNC	ENSMUSG00000057594.13	novel	911	5	NA	NA	3	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	70.9048658414922	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCACTGTCATCTCAC	NA	False	NA	-3	True	AGTAAA	-16	NA	120358304	120356328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358065_120358186
ES.7018.16	chr11	-	749	3	NNC	ENSMUSG00000057594.13	novel	2206	3	NA	NA	7	-273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.5	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTGTCTGTGTGCTT	NA	False	NA	NA	False	TTTAAA	-8	NA	120358300	120357013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120357594_120358007_120358065_120358188
ES.7018.2	chr11	-	3324	4	FSM	ENSMUSG00000057594.13	ENSMUST00000125806.8	607	4	-95	-2622	4	1890	multi-exon	FALSE	canonical	3	126	junction_1	22.69116323349	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAAAAGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	120358255	120353801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007
ES.7018.3	chr11	-	1860	5	NNC	ENSMUSG00000057594.13	novel	588	5	NA	NA	8	540	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	74.6408065336917	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGGTATATGAGGTCCC	NA	False	NA	0	True	AATAAA	-17	NA	120358299	120355151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356648_120356809_120356926_120357479_120357559_120358007_120358065_120358187
ES.7018.4	chr11	-	1780	4	NNC	ENSMUSG00000057594.13	novel	607	4	NA	NA	7	539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.7245549721023	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGGGTATATGAGGTCC	NA	False	NA	-1	True	AATAAA	-16	NA	120358300	120355152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356648_120357479_120357594_120358007_120358065_120358186
ES.7018.5	chr11	-	2046	4	NNC	ENSMUSG00000057594.13	novel	429	4	NA	NA	3	539	intron_retention	FALSE	non_canonical	0	0	junction_3	81.6999932000541	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGGGTATATGAGGTCC	NA	False	NA	-1	True	AATAAA	-16	NA	120358288	120355152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356926_120357479_120357594_120358007_120358065_120358186
ES.7018.6	chr11	-	2066	4	NNC	ENSMUSG00000057594.13	novel	429	4	NA	NA	3	537	intron_retention	FALSE	non_canonical	0	0	junction_2	84.3814092215947	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGGGGTATATGAGGT	NA	False	NA	-3	True	AATAAA	-14	NA	120358288	120355154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120356926_120357479_120357616_120358007_120358065_120358186
ES.7018.8	chr11	-	1636	3	FSM	ENSMUSG00000057594.13	ENSMUST00000154136.8	760	3	10	-886	-6	-2	multi-exon	FALSE	canonical	3	167	junction_2	6	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTGGCCTGGAGA	NA	False	NA	NA	False	CATAAA	-24	NA	120358297	120355693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120356926_120357479_120357594_120358007
ES.7018.9	chr11	-	1879	3	FSM	ENSMUSG00000057594.13	ENSMUST00000128824.8	938	3	-41	-900	3	-2	multi-exon	FALSE	canonical	3	126	junction_1	26.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTGGCCTGGAGA	NA	False	NA	NA	False	CATAAA	-24	NA	120358288	120355693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120356648_120356809_120356926_120357479
ES.7019.11	chr11	+	2888	22	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	31	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	127.052259499747	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGATTGTTCGGGCAG	8213	False	NA	18	True	AATAAA	-19	NA	120358491	120374810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369588_120369912_120370124_120370378_120370552_120370624_120370770_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.12	chr11	+	2890	22	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	97.7056526400757	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8213	False	NA	13	True	AATAAA	-14	NA	120358491	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369140_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.13	chr11	+	5198	21	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	31	0	intron_retention	FALSE	canonical	0	0	junction_14	98.4771420178307	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8213	False	NA	13	True	AATAAA	-14	NA	120358491	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369576_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.14	chr11	+	5888	19	NIC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	33	-4	intron_retention	FALSE	canonical	3	341	junction_18	40.8871149977533	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8215	False	NA	9	True	AATAAA	-10	NA	120358493	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120370124_120370378_120370552_120370624_120370766_120370849_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.15	chr11	+	3587	21	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	33	-5	intron_retention	FALSE	canonical	0	0	junction_16	101.005581528943	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCATGATTGATT	8215	False	NA	8	True	AATAAA	-9	NA	120358493	120374800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370770_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.19	chr11	+	4019	19	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	36	-4	intron_retention	FALSE	canonical	3	286	junction_13	48.5354967466538	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8218	False	NA	9	True	AATAAA	-10	NA	120358496	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569
ES.7019.2	chr11	+	2918	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	-12	-6	-12	6	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGATTGTTCGGGCAGC	8170	False	NA	19	True	AATAAA	-20	NA	120358448	120374811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.21	chr11	+	2756	22	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	98.6733312696743	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8220	False	NA	9	True	AATAAA	-10	NA	120358498	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120370959_120373391_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.23	chr11	+	2824	22	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	38	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	136.838418707858	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8220	False	NA	13	True	AATAAA	-14	NA	120358498	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360949_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373391_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.24	chr11	+	3221	21	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	38	0	intron_retention	FALSE	canonical	3	286	junction_13	47.1432656908704	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8220	False	NA	13	True	AATAAA	-14	NA	120358498	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.27	chr11	+	2779	21	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	39	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	98.3425009850777	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTCTCATGATTGAT	8221	False	NA	7	True	AATAAA	-8	NA	120358499	120374799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.28	chr11	+	2925	22	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	39	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	113.531259742749	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTCATGATTGATT	8221	False	NA	8	True	AATAAA	-9	NA	120358499	120374800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373774_120373928_120374214
ES.7019.29	chr11	+	3112	21	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	39	-4	intron_retention	FALSE	canonical	3	286	junction_14	48.1654440444599	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8221	False	NA	9	True	AATAAA	-10	NA	120358499	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.30	chr11	+	3165	21	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	39	-4	intron_retention	FALSE	canonical	3	6	junction_11	99.5447010141675	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8221	False	NA	9	True	AATAAA	-10	NA	120358499	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369140_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
ES.7019.33	chr11	+	5546	19	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	41	-4	intron_retention	FALSE	canonical	3	286	junction_14	49.2049442963802	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8223	False	NA	9	True	AATAAA	-10	NA	120358501	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370766_120370849_120373490_120373569_120373690_120373840
ES.7019.35	chr11	+	3226	20	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	41	0	intron_retention	FALSE	canonical	3	286	junction_14	47.531532032916	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8223	False	NA	13	True	AATAAA	-14	NA	120358501	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373690_120373840
ES.7019.37	chr11	+	4650	18	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	46	-3	intron_retention	FALSE	canonical	3	286	junction_12	48.1721968944039	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTCATGATTGATTGT	8228	False	NA	10	True	AATAAA	-11	NA	120358506	120374802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369432_120369520_120369581_120369915_120370124_120370378_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
ES.7019.38	chr11	+	1977	18	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	47	3725	47	67	5prime_fragment	FALSE	canonical	3	286	junction_14	49.9424582389383	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACTATTTTTCTAGA	8229	False	NA	NA	False	TATAAA	-18	NA	120358507	120371080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849
ES.7019.40	chr11	+	2917	21	NIC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	55	-4	intron_retention	FALSE	canonical	3	105	junction_14	78.167944197094	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8237	False	NA	9	True	AATAAA	-10	NA	120358515	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.41	chr11	+	2845	22	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	113.672002986833	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8238	False	NA	13	True	AATAAA	-14	NA	120358516	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370770_120370855_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.43	chr11	+	2845	22	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	58	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	128.220897826586	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATTGATTGTTCGGGC	8240	False	NA	16	True	AATAAA	-17	NA	120358518	120374808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366075_120367962_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370770_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.45	chr11	+	4065	21	NIC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	79	-4	intron_retention	FALSE	canonical	3	105	junction_13	74.1885435899641	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8261	False	NA	9	True	AATAAA	-10	NA	120358539	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.46	chr11	+	1899	12	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	-158	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	119.55088131478	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	1699	False	NA	9	True	AATAAA	-10	NA	120368182	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120368214_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.6	chr11	+	3160	21	ISM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	29	-2	29	2	intron_retention	FALSE	canonical	3	286	junction_14	46.7074940453885	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGATTGATTGTTCGGG	8211	False	NA	15	True	AATAAA	-16	NA	120358489	120374807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840
ES.7019.7	chr11	+	2960	21	NIC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	29	0	intron_retention	FALSE	canonical	3	286	junction_13	48.7334330824333	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8211	False	NA	13	True	AATAAA	-14	NA	120358489	120374805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.7019.8	chr11	+	2226	15	NNC	ENSMUSG00000025793.18	novel	2903	22	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	135.806059195773	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCTCATGATTGATTG	8212	False	NA	9	True	AATAAA	-10	NA	120358490	120374801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120369159_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ES.702.1	chr1	+	1338	1	FSM	ENSMUSG00000118839.1	ENSMUST00000240405.1	191	1	0	-1147	0	1147	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAAAGTGGGATAGT	NA	False	NA	NA	False	NA	NA	NA	72265398	72266736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72265400_72266700
ES.7020.1	chr11	-	215	1	Intergenic	novelGene_5672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGACAGGGTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	120366867	120366652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120366700_120366900
ES.7021.1	chr11	+	1033	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	-29	312	-29	296	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTCCTGAACCTT	8926	False	NA	24	True	TATAAA	-16	NA	120375409	120379579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.11	chr11	+	993	5	NNC	ENSMUSG00000039640.8	novel	1316	5	NA	NA	77	296	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	465.77965552394	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTCCTGAACCTT	9032	False	NA	24	True	TATAAA	-16	NA	120375515	120379579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120375595_120376068_120376256_120376481_120376635_120378922_120379061_120379143
ES.7021.12	chr11	+	1017	5	NNC	ENSMUSG00000039640.8	novel	1316	5	NA	NA	77	-292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	479.0662793393	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGGCCTGCAGCCATA	9032	False	NA	44	True	TATAAA	-36	NA	120375515	120379599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120375595_120376068_120376326_120376481_120376569_120378922_120379061_120379143
ES.7021.13	chr11	+	1061	5	NNC	ENSMUSG00000039640.8	novel	768	4	NA	NA	-187	239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	478.543101507064	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAATGAGTGGTGTGTG	9182	False	NA	24	True	AATATA	-16	NA	120375665	120379522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120375936_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.14	chr11	+	1098	4	FSM	ENSMUSG00000039640.8	ENSMUST00000137619.2	768	4	-91	-239	-91	239	multi-exon	FALSE	canonical	3	1076	junction_1	37.0075067460043	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAATGAGTGGTGTGTG	9278	False	NA	24	True	AATATA	-16	NA	120375761	120379522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.15	chr11	+	2009	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	23	-9	23	9	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCAGATCTTTGAGCTC	NA	False	NA	32	True	NA	NA	NA	120382688	120390022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ES.7021.16	chr11	+	1023	7	FSM	ENSMUSG00000025792.10	ENSMUST00000123373.2	813	7	-45	-165	-18	165	multi-exon	FALSE	canonical	3	78	junction_5	9.51606828241346	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGTCTCCAGTTTCA	NA	False	NA	NA	False	NA	NA	NA	120382695	120387907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461
ES.7021.17	chr11	+	2559	9	NIC	ENSMUSG00000025792.10	novel	1658	10	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	78	junction_5	8.72406871820712	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTTGGGGGCTGGCAG	NA	False	NA	20	True	AATAAA	-34	NA	120382710	120390010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120388288_120388745_120388803_120388896
ES.7021.18	chr11	+	1978	11	NNC	ENSMUSG00000025792.10	novel	2023	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.9957139576757	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGGGGGCTGGCAGAT	NA	False	NA	22	True	AATAAA	-36	NA	120382722	120390012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120382903_120385302_120385423_120385772_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ES.7021.2	chr11	+	3311	4	NIC	ENSMUSG00000039640.8	novel	1316	5	NA	NA	-10	239	intron_retention	FALSE	canonical	3	1076	junction_2	1.69967317119759	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAATGAGTGGTGTGTG	8945	False	NA	24	True	AATATA	-16	NA	120375428	120379522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120375595_120376068_120376256_120376481_120379061_120379143
ES.7021.20	chr11	+	1217	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	76	730	1	-136	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTCCCTGGCTGCTACC	NA	False	NA	NA	False	NA	NA	NA	120382741	120389283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ES.7021.3	chr11	+	5192	4	ISM	ENSMUSG00000039640.8_ENSMUSG00000025792.10	ENSMUST00000043627.8	1316	5	21	-3814	21	-3034	intron_retention	FALSE	canonical	3	1076	junction_2	36.3348623531481	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGCTGTCTTCCTGTTC	8976	False	NA	NA	False	AATAAA	-19	NA	120375459	120383705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922
ES.7021.5	chr11	+	975	4	ISM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	48	376	48	232	intron_retention	FALSE	canonical	3	1076	junction_2	36.3348623531481	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGTGTTCAATGAGTG	9003	False	NA	17	True	AATATA	-9	NA	120375486	120379515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922
ES.7021.6	chr11	+	2400	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	48	-1132	48	1132	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTTCCAGTTGGGACT	9003	False	NA	NA	False	AAAACA	-19	NA	120375486	120381023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.7	chr11	+	1268	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	48	0	48	0	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTGTAACCCTGGCC	9003	False	NA	NA	False	NA	NA	NA	120375486	120379891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.8	chr11	+	5085	5	FSM	ENSMUSG00000039640.8_ENSMUSG00000025792.10	ENSMUST00000043627.8	1316	5	48	-3817	48	-3031	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTCTTCCTGTTCCCC	9003	False	NA	NA	False	AATAAA	-22	NA	120375486	120383708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ES.7021.9	chr11	+	1115	4	NIC	ENSMUSG00000039640.8	novel	1316	5	NA	NA	57	238	intron_retention	FALSE	canonical	3	1077	junction_3	36.0832371053374	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAATGAGTGGTGTGT	9012	False	NA	23	True	AATATA	-15	NA	120375495	120379521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120375595_120376068_120376569_120378922_120379061_120379143
ES.7022.1	chr11	-	179	1	Intergenic	novelGene_5673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCACTTGGA	1392	False	NA	NA	False	NA	NA	NA	120377343	120377164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120377200_120377300
ES.7023.1	chr11	+	178	1	Intergenic	novelGene_5674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGACTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	120405316	120405494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120405300_120405500
ES.7024.1	chr11	-	1206	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	4	-5	4	5	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAGTCTGTCAGGT	NA	False	NA	-19	True	AATAAA	-22	NA	120440549	120433708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ES.7024.2	chr11	-	1267	4	FSM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	-6	-5	-6	5	multi-exon	FALSE	canonical	3	334	junction_3	32.7244387100664	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAGTCTGTCAGGT	NA	False	NA	-19	True	AATAAA	-22	NA	120440533	120433708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120434575_120434729_120434832_120435506_120435755_120440482
ES.7024.3	chr11	-	5910	4	ISM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	28	-5	2	5	intron_retention	FALSE	canonical	3	389	junction_1	9.46337971105226	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCAGTCTGTCAGGT	NA	False	NA	-19	True	AATAAA	-22	NA	120440525	120433708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702
ES.7024.4	chr11	-	5971	3	ISM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	13	0	13	0	intron_retention	FALSE	canonical	3	389	junction_1	11.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	-24	True	AATAAA	-17	NA	120440514	120433713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120434575_120434729_120434832_120435506
ES.7024.5	chr11	-	2089	2	NIC	ENSMUSG00000061111.9	novel	1256	4	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	334	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCCATGGCAGTCT	NA	False	NA	-26	True	AATAAA	-15	NA	120440532	120433715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120435755_120440482
ES.7024.7	chr11	-	1769	5	NNC	ENSMUSG00000061111.9	novel	1205	5	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	164.557740626201	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTCCATGGCAGTCT	NA	False	NA	-26	True	AATAAA	-15	NA	120440534	120433715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120434575_120434729_120434832_120434921_120435626_120435702_120435755_120440482
ES.7024.8	chr11	-	1153	5	NNC	ENSMUSG00000061111.9	novel	1205	5	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	164.557740626201	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGCTCCATGGCAG	NA	False	NA	-29	True	AATAAA	-12	NA	120440514	120433718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120434575_120434729_120434824_120435506_120435626_120435702_120435755_120440482
ES.7024.9	chr11	-	2508	1	NIC	ENSMUSG00000061111.9	novel	1205	5	NA	NA	-7	-4313	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTTCACTAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	120440534	120438026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120438000_120440500
ES.7025.1	chr11	+	166	1	Intergenic	novelGene_5675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTTTTTTGTGTAA	1746	False	NA	NA	False	NA	NA	NA	120459866	120460032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120459900_120460000
ES.7026.1	chr11	+	231	1	Intergenic	novelGene_5676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCTTTAAATTTTTGA	2019	False	NA	NA	False	AAGAAA	-13	NA	120460139	120460370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120460100_120460400
ES.7026.2	chr11	+	207	2	Intergenic	novelGene_5677	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAAACCTTGGGGAGATG	2019	False	NA	NA	False	NA	NA	NA	120460139	120481235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120460311_120481199
ES.7026.3	chr11	+	182	1	Intergenic	novelGene_5678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCCCAGCACTT	2315	False	NA	NA	False	NA	NA	NA	120460435	120460617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120460400_120460600
ES.7026.4	chr11	+	306	1	Intergenic	novelGene_5679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCCTTTCCATTACGT	6158	False	NA	9	True	AATAAA	-18	NA	120464278	120464584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120464300_120464600
ES.7027.1	chr11	+	1951	5	NNC	ENSMUSG00000025135.13	novel	3229	3	NA	NA	-985	-101	intron_retention	FALSE	canonical	0	0	junction_2	389.286767691891	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGCTGGAGGCCTCTG	2915	False	NA	28	True	AGTAAA	-17	NA	120488261	120496501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120489431_120490067_120490195_120494106_120494259_120494688_120494797_120496106
ES.7027.10	chr11	+	739	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	125	98	125	-98	multi-exon	FALSE	canonical	3	1006	junction_1	419	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGGAGGCCTCTGCTT	4136	False	NA	31	True	AGTAAA	-20	NA	120489482	120496504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489697_120490067_120490195_120496106
ES.7027.11	chr11	+	734	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	128	-98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	922	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGGAGGCCTCTGCTT	4139	False	NA	31	True	AGTAAA	-20	NA	120489485	120496504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120489695_120490067_120490195_120496106
ES.7027.13	chr11	+	771	4	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	134	59163	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	753.850559903398	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCCAAAAAACAAAAAAACA	4145	False	NA	NA	False	AAAACA	-21	NA	120489491	120558187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120489697_120490067_120490195_120496106_120496500_120558141
ES.7027.14	chr11	+	4142	3	FSM	ENSMUSG00000025135.13_ENSMUSG00000044034.12	ENSMUST00000093140.5	962	3	138	-3318	138	1	multi-exon	FALSE	canonical	3	1006	junction_1	419	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTAAGGGTTGCTGGAG	4149	False	NA	NA	False	AATAAA	-15	NA	120489495	120499920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489697_120490067_120490195_120496106
ES.7027.15	chr11	+	1897	2	NNC	ENSMUSG00000025135.13	novel	454	2	NA	NA	-595	-101	intron_retention	FALSE	canonical	2	5	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTGCTGGAGGCCTCTG	2208	False	NA	28	True	AGTAAA	-17	NA	120494174	120496501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120494259_120494688
ES.7027.16	chr11	+	4014	1	Genic_Genomic	ENSMUSG00000025135.13	novel	NA	NA	NA	NA	243	2	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTTGATCATGGTGT	3046	False	NA	NA	False	NA	NA	NA	120495012	120499026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120495000_120499000
ES.7027.17	chr11	+	4088	1	Genic_Genomic	ENSMUSG00000025135.13_ENSMUSG00000044034.12	novel	NA	NA	NA	NA	1061	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTAAGGGTTGCTGG	3864	False	NA	NA	False	AATAAA	-13	NA	120495830	120499918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120495800_120499900
ES.7027.18	chr11	+	2487	1	Antisense	novelGene_ENSMUSG00000051510.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTCTGGGTTTCTGTT	NA	False	NA	11	True	NA	NA	NA	120523466	120525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120523500_120526000
ES.7027.19	chr11	+	1947	1	Antisense	novelGene_ENSMUSG00000051510.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAGCCTCAAAAAGTAAT	NA	False	NA	NA	False	NA	NA	NA	120523517	120525464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120523500_120525500
ES.7027.2	chr11	+	1443	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	-631	2417	-631	5	multi-exon	FALSE	canonical	3	903	junction_1	470.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTTCATCGTAATCTG	3269	False	NA	134	True	AATAAA	-22	NA	120488615	120496607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489431_120490067_120490195_120496106
ES.7027.20	chr11	+	1167	1	Antisense	novelGene_ENSMUSG00000051510.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAAAAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	120524016	120525183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120524000_120525200
ES.7027.21	chr11	+	2312	3	Antisense	novelGene_ENSMUSG00000025140.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAATATGGGACT	NA	False	NA	NA	False	NA	NA	NA	120524548	120529161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120525281_120527320_120527394_120527654
ES.7027.22	chr11	+	4959	1	Antisense	novelGene_ENSMUSG00000025140.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAATATACCGGGTATGG	NA	False	NA	NA	False	NA	NA	NA	120524576	120529535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120524600_120529500
ES.7027.23	chr11	+	900	2	Intergenic	novelGene_5681	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTCTGGGTTTCTGTT	NA	False	NA	11	True	NA	NA	NA	120524603	120525953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120525319_120525768
ES.7027.24	chr11	+	1827	1	FSM	ENSMUSG00000053613.7	ENSMUST00000151998.2	2659	1	832	0	832	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTCAGGAGCAGGAC	NA	False	NA	NA	False	NA	NA	NA	120550814	120552641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120550800_120552600
ES.7027.25	chr11	+	168	1	Intergenic	novelGene_5682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120555056	120555224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120555100_120555200
ES.7027.26	chr11	+	2287	17	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-6194	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	321.339481701206	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120557604	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120557885_120563710_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599619_120599755_120599826_120599896_120600073_120600169
ES.7027.27	chr11	+	916	4	ISM	ENSMUSG00000025142.19	ENSMUST00000143844.9	636	6	-143	10120	-18	495	5prime_fragment	FALSE	canonical	3	887	junction_3	50.8745734352852	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTGAAGTGTGCACAA	NA	False	NA	NA	False	NA	NA	NA	120563780	120569774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245
ES.7027.28	chr11	+	1945	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	-37	-88	-18	88	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCACAGGGTGTTACTGT	NA	False	NA	104	True	NA	NA	NA	120563780	120600361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.29	chr11	+	2107	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563818	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.3	chr11	+	655	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	56	2518	37	-96	multi-exon	FALSE	canonical	3	903	junction_1	470.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGCTTGC	3956	False	NA	33	True	AGTAAA	-22	NA	120489302	120496506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489431_120490067_120490195_120496106
ES.7027.30	chr11	+	4109	12	NIC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	22	junction_8	282.239567661444	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563818	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599826_120599896_120600073_120600169
ES.7027.31	chr11	+	4058	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_10	340.093774583135	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563818	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596037_120596144_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.32	chr11	+	2135	2	FSM	ENSMUSG00000025142.19	ENSMUST00000169964.2	505	2	26	-1656	7	20	multi-exon	FALSE	canonical	3	898	junction_1	0	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATTTATCTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	120563824	120566828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120563997_120564865
ES.7027.33	chr11	+	1862	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	7	0	intron_retention	FALSE	canonical	2	20	junction_6	250.586007068981	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563824	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579410_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.34	chr11	+	1782	16	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	28	junction_1	243.33565295698	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563825	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563970_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.35	chr11	+	4331	11	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	10	0	intron_retention	FALSE	canonical	3	887	junction_3	54.6469578293248	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563827	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483
ES.7027.36	chr11	+	1732	15	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_13	224.063766433958	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563830	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599896_120600073_120600169
ES.7027.37	chr11	+	1854	15	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_3	60.5904619691305	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563851	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.38	chr11	+	5584	12	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_2	51.1316563489951	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563851	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483
ES.7027.39	chr11	+	2966	1	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	11	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATTTATCTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	120563862	120566828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563900_120566800
ES.7027.4	chr11	+	3424	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	77	-272	-34	272	multi-exon	FALSE	canonical	3	903	junction_1	470.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCGCTACATTCTGCC	3977	False	NA	NA	False	TATAAA	-16	NA	120489323	120499296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489431_120490067_120490195_120496106
ES.7027.40	chr11	+	1781	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_13	241.164526597277	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563867	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599739_120599826_120599896_120600073_120600169
ES.7027.41	chr11	+	1916	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-9	0	intron_retention	FALSE	canonical	2	27	junction_13	247.962801686882	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563872	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599619_120599755_120600073_120600169
ES.7027.42	chr11	+	3965	13	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-5	0	intron_retention	FALSE	canonical	3	887	junction_3	64.44048718693	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563876	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.44	chr11	+	1707	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_8	245.526228515181	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563877	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592060_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.45	chr11	+	1694	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106158.9	1690	15	-4	0	-4	0	multi-exon	FALSE	canonical	3	22	junction_10	252.602010107212	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563877	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.46	chr11	+	2438	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	60	-678	-4	678	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCACATGGTCCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	120563877	120600951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.47	chr11	+	1778	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	intron_retention	FALSE	canonical	2	19	junction_8	250.946382190885	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563877	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592060_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.48	chr11	+	5339	13	NIC	ENSMUSG00000025142.19	novel	1689	15	NA	NA	-3	0	intron_retention	FALSE	canonical	3	887	junction_2	49.9507396230415	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563878	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755
ES.7027.49	chr11	+	1976	15	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	887	junction_3	64.9601526212141	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563878	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599826_120599896_120600073_120600169
ES.7027.5	chr11	+	3154	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	77	-2	-34	2	multi-exon	FALSE	canonical	3	903	junction_1	470.5	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTTGATCATGGTGT	3977	False	NA	NA	False	NA	NA	NA	120489323	120499026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489431_120490067_120490195_120496106
ES.7027.50	chr11	+	1888	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	246.856557538989	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTCAAAGCTGAGTTTC	NA	False	NA	6	True	AATAAA	-10	NA	120563878	120600263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569486_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.51	chr11	+	2174	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	887	junction_3	65.6301273004057	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120563878	120600271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599826_120599896_120600073_120600169
ES.7027.52	chr11	+	3891	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	887	junction_3	66.4836145671786	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563879	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.53	chr11	+	1699	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	254.712773411102	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563879	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599550_120599896_120600073_120600169
ES.7027.54	chr11	+	1963	13	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	268.230453880407	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563880	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120595509_120600220
ES.7027.55	chr11	+	1729	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_13	316.275084205014	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563880	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599739_120599826_120599937_120600073_120600169
ES.7027.56	chr11	+	1969	13	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	56	junction_5	258.361503840388	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563880	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.57	chr11	+	1841	17	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	325.28016169719	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563881	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120581392_120581483_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.59	chr11	+	1733	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	249.277480375228	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCAAAGCTGAGTTT	NA	False	NA	5	True	AATAAA	-9	NA	120563886	120600262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577532_120579365_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.6	chr11	+	927	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	40	-5	40	5	multi-exon	FALSE	canonical	3	1006	junction_1	419	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTTCATCGTAATCTG	4051	False	NA	134	True	AATAAA	-22	NA	120489397	120496607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489697_120490067_120490195_120496106
ES.7027.60	chr11	+	4276	13	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	358.529510252953	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563888	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596040_120596144_120599483_120600073_120600169
ES.7027.61	chr11	+	4175	12	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_3	67.0689789238236	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120563889	120600273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.62	chr11	+	1725	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	245.224921698881	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563890	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579410_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.63	chr11	+	1768	14	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	123	junction_13	225.718156980187	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120563891	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599896
ES.7027.64	chr11	+	2369	15	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	317	3	-50	0	3prime_fragment	FALSE	canonical	3	887	junction_2	62.0699079215344	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564134	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.65	chr11	+	2120	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	243.577411833601	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564148	120600273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.66	chr11	+	4283	12	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	5	junction_11	278.08123552969	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564180	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120600169
ES.7027.67	chr11	+	2818	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_11	393.263010662782	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564185	120600273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596040_120596144_120596857_120597032_120599483_120599826_120599896_120600073_120600169
ES.7027.68	chr11	+	2328	15	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	7	0	intron_retention	FALSE	canonical	3	34	junction_12	249.620906453717	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564191	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599739_120599826_120599896_120600073_120600169
ES.7027.69	chr11	+	1971	14	NIC	ENSMUSG00000025142.19	novel	694	7	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_1	264.322691434354	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564191	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564234_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.7	chr11	+	3318	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	65	-2421	65	-1	multi-exon	FALSE	canonical	3	1006	junction_1	419	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCACTTTTGATCATGG	4076	False	NA	NA	False	NA	NA	NA	120489422	120499023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120489697_120490067_120490195_120496106
ES.7027.70	chr11	+	1836	16	NNC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	335.532386249408	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564385_120564865_120564922_120568330_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.71	chr11	+	2538	15	NNC	ENSMUSG00000025142.19	novel	1030	7	NA	NA	-7	0	intron_retention	FALSE	canonical	2	3	junction_12	396.24946404393	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596857_120597032_120599483_120600073_120600169
ES.7027.72	chr11	+	1886	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.73	chr11	+	4741	11	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-7	0	intron_retention	FALSE	canonical	3	887	junction_2	67.1204886752175	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120564192	120600273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.75	chr11	+	1823	15	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	334.866840729876	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.76	chr11	+	2537	12	NIC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	-7	0	intron_retention	FALSE	canonical	3	22	junction_9	279.517145647175	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120564192	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120600073_120600169
ES.7027.77	chr11	+	1830	16	NNC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	250.110606643452	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564192	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564385_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.78	chr11	+	1812	15	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	328.867506352777	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTTTCTTTTCTGC	NA	False	NA	14	True	AATAAA	-18	NA	120564193	120600271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.79	chr11	+	1952	15	NIC	ENSMUSG00000025142.19	novel	920	7	NA	NA	-2	0	intron_retention	FALSE	canonical	3	49	junction_1	243.467395042908	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564197	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.80	chr11	+	2368	16	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_11	379.782428942327	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564197	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596040_120596144_120599483_120599536_120599755_120599826_120599937_120600073_120600169
ES.7027.81	chr11	+	2689	12	ISM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	385	3	3	0	intron_retention	FALSE	canonical	3	887	junction_2	50.999594877665	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564202	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483
ES.7027.82	chr11	+	2381	14	NNC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	265.376945262627	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120564204	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564922_120568336_120568452_120569232_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.83	chr11	+	2220	16	NNC	ENSMUSG00000025142.19	novel	870	8	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	246.479712935748	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564205	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564788_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.84	chr11	+	2589	13	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	887	junction_2	62.4105470965356	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564205	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.85	chr11	+	2155	14	NIC	ENSMUSG00000025142.19	novel	920	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	49	junction_1	251.623533014827	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120564212	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.86	chr11	+	2219	14	NNC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_13	348.486737074971	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120564215	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600173
ES.7027.87	chr11	+	2121	14	NIC	ENSMUSG00000025142.19	novel	1030	7	NA	NA	206	0	intron_retention	FALSE	canonical	3	27	junction_1	257.320765449198	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564435	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
ES.7027.88	chr11	+	1882	15	NNC	ENSMUSG00000025142.19	novel	1030	7	NA	NA	385	0	intron_retention	FALSE	canonical	2	15	junction_1	251.981058973949	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564614	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120564788_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
ES.7027.89	chr11	+	4849	13	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	1063	0	intron_retention	FALSE	canonical	3	887	junction_1	66.5062131600416	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120565292	120600273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599826_120599896_120600073_120600169
ES.7027.9	chr11	+	1207	2	ISM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	231	2428	120	-6	3prime_fragment	FALSE	canonical	3	1844	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGGCCAAAACCTTC	4131	False	NA	123	True	AATAAA	-11	NA	120489477	120496596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120490195_120496106
ES.7027.90	chr11	+	2650	12	NNC	ENSMUSG00000025142.19	novel	1689	15	NA	NA	171	0	intron_retention	FALSE	canonical	2	3	junction_9	426.052163802734	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGCTGAGTTTCTTTTC	NA	False	NA	11	True	AATAAA	-15	NA	120567657	120600268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120568452_120569245_120569347_120577469_120577528_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596857_120597032_120599483_120600073_120600169
ES.7027.91	chr11	+	175	1	Intergenic	novelGene_5684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAATGAT	2598	False	NA	NA	False	NA	NA	NA	120576526	120576701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120576500_120576700
ES.7027.92	chr11	+	2794	9	NNC	ENSMUSG00000025142.19	novel	1689	15	NA	NA	829	0	intron_retention	FALSE	canonical	2	19	junction_2	324.675968274524	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	1440	False	NA	13	True	AATAAA	-17	NA	120578347	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120580168_120591969_120592060_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599826_120599896_120600073_120600169
ES.7027.93	chr11	+	1932	10	NNC	ENSMUSG00000025142.19	novel	1689	15	NA	NA	-307	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	313.18865848314	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	2885	False	NA	13	True	AATAAA	-17	NA	120579792	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120598730_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.94	chr11	+	524	5	NNC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	427.271795816199	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	3122	False	NA	13	True	AATAAA	-17	NA	120580029	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120580168_120591969_120592110_120592306_120592382_120600002_120600073_120600169
ES.7027.95	chr11	+	876	10	NNC	ENSMUSG00000025142.19	novel	1689	15	NA	NA	-1268	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	412.478626457118	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120592071	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120596857_120597032_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7027.96	chr11	+	998	2	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	-589	0	intron_retention	FALSE	canonical	3	48	junction_1	0	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	208	False	NA	13	True	AATAAA	-17	NA	120598894	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120599106_120599483
ES.7027.97	chr11	+	580	5	NNC	ENSMUSG00000025142.19	novel	468	3	NA	NA	-559	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	432.921759674886	568	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	238	False	NA	13	True	AATAAA	-17	NA	120598924	120600270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120599106_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ES.7028.1	chr11	-	4207	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	380	-1726	-32	1726	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAAGAGTCTT	3747	False	NA	NA	False	NA	NA	NA	120463699	120449397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.10	chr11	-	2584	10	NIC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-32	1	intron_retention	FALSE	canonical	3	1798	junction_6	86.1162005664439	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGTCACTGCTGCTT	3747	False	NA	-10	True	AATAAA	-15	NA	120463699	120451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120452087_120452986_120453074_120453189_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.11	chr11	-	1730	7	NNC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-2642	1	intron_retention	FALSE	non_canonical	0	0	junction_1	715.546799463335	1253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGTCACTGCTGCTT	3356	False	NA	-10	True	AATAAA	-15	NA	120454704	120451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120452080_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641
ES.7028.12	chr11	-	2069	10	NNC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	600.334351285459	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGTCACTGCTGCTT	3750	False	NA	-10	True	AATAAA	-15	NA	120463696	120451129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120451747_120453165_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.14	chr11	-	4965	3	NIC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-4578	0	intron_retention	FALSE	canonical	3	1886	junction_2	77	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	1420	False	NA	-11	True	AATAAA	-14	NA	120456640	120451130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120453074_120453189_120453602_120454030
ES.7028.19	chr11	-	2358	12	NNC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	563.12376984575	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCATTGTCACTGCTG	3704	False	NA	-13	True	AATAAA	-12	NA	120463742	120451132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120451718_120451874_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.2	chr11	-	2969	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	-104	-4	-104	4	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGCTTTATTTTGAGC	3263	False	NA	0	True	AATAAA	-25	NA	120464183	120451119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.20	chr11	-	2333	10	NIC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-32	-3	intron_retention	FALSE	canonical	0	0	junction_7	619.068555608512	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACCCATTGTCACTGCT	3747	False	NA	-14	True	AATAAA	-11	NA	120463699	120451133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458999_120459134_120462346_120462554_120463482
ES.7028.21	chr11	-	1903	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	381	577	-31	70	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGTAATGTCTTTC	3748	False	NA	NA	False	NA	NA	NA	120463698	120451700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.3	chr11	-	2597	10	NIC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-32	-2	intron_retention	FALSE	canonical	3	1798	junction_7	94.1399011453396	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCACTGCTGCTTTATT	3747	False	NA	-6	True	AATAAA	-19	NA	120463699	120451125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120459134_120462346_120462554_120463482
ES.7028.4	chr11	-	2472	11	NNC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	-31	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	579.107252587981	1254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCACTGCTGCTTTATT	3748	False	NA	-6	True	AATAAA	-19	NA	120463698	120451125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120452087_120452992_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ES.7028.8	chr11	-	3357	10	ISM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	428	5	16	2	intron_retention	FALSE	canonical	3	1798	junction_7	93.3560818837817	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGTCACTGCTGCTTT	3795	False	NA	-9	True	AATAAA	-16	NA	120463651	120451128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346
ES.7029.1	chr11	-	1870	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	-4	1	-4	-1	multi-exon	FALSE	canonical	3	3168	junction_5	160.793780974265	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472454	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ES.7029.10	chr11	-	1009	2	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	23	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGTGTGGTCTGTGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	120472427	120468932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120469862_120472347
ES.7029.11	chr11	-	1807	6	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1357.91095437072	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472425	120468934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470523_120470571_120470792_120470877_120471007_120471220_120472347
ES.7029.14	chr11	-	1708	4	NIC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	1602.70958067892	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472437	120468934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120470257_120470792_120470877_120471007_120471220_120472347
ES.7029.17	chr11	-	1818	6	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1358.8846897364	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTGTGTGGTCTGTG	NA	False	NA	-16	True	AATAAA	-16	NA	120472417	120468935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471214_120472351
ES.7029.18	chr11	-	2147	4	NIC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	23	-2	intron_retention	FALSE	canonical	3	3168	junction_3	178.26384939185	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGATTGTGTGGTCTGT	NA	False	NA	-17	True	AATAAA	-15	NA	120472427	120468936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120470257_120470341_120470877_120471007_120471220_120472347
ES.7029.19	chr11	-	3164	4	NIC	ENSMUSG00000025132.14	novel	2150	6	NA	NA	46	-2	intron_retention	FALSE	canonical	3	3182	junction_2	173.317306951409	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGATTGTGTGGTCTGT	NA	False	NA	-17	True	AATAAA	-15	NA	120472404	120468936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120470257_120470341_120470406_120470493_120470877_120471007
ES.7029.2	chr11	-	1820	6	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1334.83218420894	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472409	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470562_120470788_120470877_120471007_120471220_120472347
ES.7029.21	chr11	-	995	3	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	64	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1584	1543	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGATTGTGTGGTCTGT	NA	False	NA	-17	True	AATAAA	-15	NA	120472386	120468936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120469847_120471173_120471220_120472347
ES.7029.22	chr11	-	1773	6	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	65	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1334.83218420894	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGATTGTGTGGTCTGT	NA	False	NA	-17	True	AATAAA	-15	NA	120472385	120468936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470545_120470788_120470877_120471007_120471220_120472347
ES.7029.23	chr11	-	3336	2	NIC	ENSMUSG00000025132.14	novel	2150	6	NA	NA	46	-3	intron_retention	FALSE	canonical	3	3597	junction_1	0	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGATTGTGTGGTCTG	NA	False	NA	-18	True	AATAAA	-14	NA	120472404	120468937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120470877_120471007
ES.7029.24	chr11	-	1678	5	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	39	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1395.71943813934	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGATTGTGTGGTCT	NA	False	NA	-19	True	AATAAA	-13	NA	120472411	120468938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470575_120471068_120471220_120472347
ES.7029.26	chr11	-	1014	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	65	788	65	-783	multi-exon	FALSE	canonical	3	3168	junction_5	160.793780974265	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACCTTGTCTCTGTCG	NA	False	NA	NA	False	NA	NA	NA	120472385	120469717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ES.7029.3	chr11	-	2965	5	ISM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	29	1	29	-1	intron_retention	FALSE	canonical	3	3182	junction_2	152.739975121119	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472421	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007
ES.7029.4	chr11	-	2002	6	NNC	ENSMUSG00000025132.14	novel	2150	6	NA	NA	176	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1358.8846897364	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472030	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471791
ES.7029.5	chr11	-	1777	7	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1252.4809601569	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472412	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120469761_120469811_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ES.7029.6	chr11	-	2164	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	-10	-4	-10	-1	multi-exon	FALSE	canonical	3	51	junction_5	1338.58961597646	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472216	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
ES.7029.7	chr11	-	2196	6	NNC	ENSMUSG00000025132.14	novel	2150	6	NA	NA	-118	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	1356.09890494757	1542	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	False	NA	-11	True	AATAAA	-21	NA	120472324	120468930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471891
ES.703.1	chr1	+	198	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	72278482	72278680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72278500_72278700
ES.7030.1	chr11	-	7863	7	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-44	4983	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1538.54379203193	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTGTGTGT	4262	False	NA	0	True	ATTAAA	-17	NA	120489235	120477963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120479877_120480567_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.10	chr11	-	3851	6	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-21	-9	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	1629.06567086781	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGAGTTGATCACAC	4285	False	NA	-6	True	AATAAA	-20	NA	120489212	120482955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486894_120488460_120488593_120488930
ES.7030.11	chr11	-	3506	6	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	1	-11	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1617.40050698644	1200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATCAGAGTTGATCAC	4307	False	NA	-8	True	AATAAA	-18	NA	120489190	120482957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120485694_120485805_120485972_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.12	chr11	-	1489	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-25	2063	-25	325	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGGTGTTTCCTTTG	4281	False	NA	NA	False	NA	NA	NA	120489216	120485009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.13	chr11	-	1343	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-200	2384	-200	4	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGGTCCATCCTGC	4106	False	NA	-3	True	AATAAA	-23	NA	120489391	120485330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.14	chr11	-	2823	6	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	0	4	intron_retention	FALSE	canonical	3	30	junction_4	2023.78619424088	1186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGGTCCATCCTGC	4306	False	NA	-3	True	AATAAA	-23	NA	120489191	120485330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486547_120486745_120488593_120488930
ES.7030.15	chr11	-	1156	6	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-28	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1617.40050698644	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGCTGTCTGGTCCA	4278	False	NA	-9	True	AATAAA	-17	NA	120489219	120485336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120485694_120485805_120485972_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.16	chr11	-	1265	7	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	1916.82799321054	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGCTGTCTGGTCCA	4291	False	NA	-9	True	AATAAA	-17	NA	120489206	120485336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486547_120486745_120486894_120488460_120488593_120488930
ES.7030.17	chr11	-	3317	4	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	3672	junction_3	337.623393081042	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGCTGTCTGGTCCA	4294	False	NA	-9	True	AATAAA	-17	NA	120489203	120485336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120485694_120485805_120485981_120486080_120488593_120488930
ES.7030.18	chr11	-	1459	6	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	1629.06567086781	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGAGCTGTCTGGTCCA	4296	False	NA	-9	True	AATAAA	-17	NA	120489201	120485336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486894_120488460_120488593_120488930
ES.7030.19	chr11	-	1167	6	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1606.78976845137	1185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGGAGCTGTCTGGTC	4266	False	NA	-11	True	AATAAA	-15	NA	120489231	120485338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120485686_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.2	chr11	-	8530	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-20	-4983	-20	4983	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTGTGTGT	4286	False	NA	0	True	ATTAAA	-17	NA	120489211	120477963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.21	chr11	-	1757	5	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	-22	-5	intron_retention	FALSE	canonical	3	3672	junction_4	314.471381845789	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACTGGAGCTGTCTGGT	4284	False	NA	-12	True	AATAAA	-14	NA	120489213	120485339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120485694_120485805_120485981_120486080_120486894_120488460_120488593_120488930
ES.7030.3	chr11	-	2830	7	NNC	ENSMUSG00000025134.3	novel	711	3	NA	NA	-17	4982	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1886.24542558903	1211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTGTGTGTGTG	4289	False	NA	-1	True	ATTAAA	-16	NA	120489208	120477964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120479877_120480567_120480689_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.4	chr11	-	3583	2	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	1323	4982	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTGTGTGTGTGTG	8337	False	NA	-1	True	ATTAAA	-16	NA	120485160	120477964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120479091_120482703
ES.7030.5	chr11	-	3523	6	NNC	ENSMUSG00000025134.3	novel	711	3	NA	NA	-20	4981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1606.78976845137	1211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTGTGTGTGTGTGT	4286	False	NA	-2	True	ATTAAA	-15	NA	120489211	120477965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120480689_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.6	chr11	-	6007	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-25	-2455	-25	2455	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGCCATGTGCTTTTCC	4281	False	NA	NA	False	TATAAA	-29	NA	120489216	120480491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.7	chr11	-	5754	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	6	-2233	6	2233	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGCTGTGTTTGGGTA	4312	False	NA	NA	False	NA	NA	NA	120489185	120480713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.8	chr11	-	4868	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-151	-1190	-151	1190	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTGTCTAAGAATTTA	4155	False	NA	NA	False	NA	NA	NA	120489342	120481756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7030.9	chr11	-	3687	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	-150	-10	-150	10	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTCTCTTTATGTTGCT	4156	False	NA	13	True	AATAAA	-39	NA	120489341	120482936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ES.7031.1	chr11	-	357	1	Intergenic	novelGene_5680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAACAAAAAA	920	False	NA	NA	False	NA	NA	NA	120492577	120492220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120492200_120492600
ES.7032.1	chr11	-	3364	13	NNC	ENSMUSG00000025137.16	novel	1228	8	NA	NA	1	6862	intron_retention	FALSE	canonical	0	0	junction_1	155.020675144389	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGGGTCCTGGATTGG	NA	False	NA	NA	False	ATTAAA	-32	NA	120508761	120494050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120495757_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503910_120504204_120504250_120504466_120504552_120505156_120505259_120506116_120506279_120506674_120506764_120508589
ES.7032.10	chr11	-	2464	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	21	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAACTGGAACCGGTC	NA	False	NA	15	True	AATAAA	-37	NA	120508761	120500891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.100	chr11	-	4930	4	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	840	4	NA	NA	639	-7	multi-exon	FALSE	non_canonical	0	0	junction_3	162.359683008642	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATCTGGTGGTATTT	8041	False	NA	-8	True	AATAAA	-9	NA	120523743	120515949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120521313_120521471_120523647
ES.7032.101	chr11	-	5894	12	Fusion	ENSMUSG00000025140.16_ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1861	8	NA	NA	356	-7	multi-exon	FALSE	canonical	0	0	junction_3	477.904205622912	1148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATCTGGTGGTATTT	NA	False	NA	-8	True	AATAAA	-9	NA	120534113	120515949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120520811_120520843_120524867_120524910_120525041_120525178_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ES.7032.102	chr11	-	3635	4	NNC	ENSMUSG00000051510.14	novel	840	4	NA	NA	579	-1362	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	162.359683008642	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTCTGCCTGACTTC	7981	False	NA	0	True	AGTAAA	-25	NA	120523803	120517304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120521313_120521471_120523647
ES.7032.103	chr11	-	3636	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	-75	1362	-75	-1362	multi-exon	FALSE	canonical	3	302	junction_2	28	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTCTGCCTGACTTC	7283	False	NA	0	True	AGTAAA	-25	NA	120524501	120517304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120524187
ES.7032.104	chr11	-	3594	4	NNC	ENSMUSG00000051510.14	novel	840	4	NA	NA	2	-1363	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	166.413808187769	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTCTGCCTGACTT	7360	False	NA	-1	True	AGTAAA	-24	NA	120524424	120517305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120520806_120520843_120524187
ES.7032.105	chr11	-	3568	3	NNC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	212	-1364	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	175	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGACTCTGCCTGACT	7614	False	NA	-2	True	AGTAAA	-23	NA	120524170	120517306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120523922
ES.7032.106	chr11	-	6549	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106180.2	732	3	-3066	-2751	342	-1364	multi-exon	FALSE	canonical	2	7	junction_2	175.5	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGACTCTGCCTGACT	7744	False	NA	-2	True	AGTAAA	-23	NA	120524040	120517306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120520811
ES.7032.107	chr11	-	3133	2	ISM	ENSMUSG00000051510.14	ENSMUST00000106180.2	732	3	301	-2598	301	-1517	3prime_fragment	FALSE	canonical	3	358	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGGCTGTTTCTCTGA	9914	False	NA	NA	False	AGTAAA	-18	NA	120520673	120517459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120520563_120520643
ES.7032.108	chr11	-	1123	1	ISM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	4318	3043	866	847	mono-exon	FALSE	NA	NA	NA	NA	NA	496	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGGCTGTCCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	120520108	120518985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120519000_120520100
ES.7032.109	chr11	-	1799	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	-78	3202	-78	688	multi-exon	FALSE	canonical	3	302	junction_2	28	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGGAGGCCGTCCTCTT	7280	False	NA	NA	False	NA	NA	NA	120524504	120519144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120524187
ES.7032.11	chr11	-	4561	7	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	2	21	intron_retention	FALSE	canonical	3	99	junction_4	119.842605111872	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAACTGGAACCGGTC	NA	False	NA	15	True	AATAAA	-37	NA	120508693	120500891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120503428_120504204_120504250_120504466_120506764_120508589
ES.7032.110	chr11	-	5216	1	NIC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	8	674	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTGCGAGCCTACCG	7410	False	NA	NA	False	TATAAA	-32	NA	120524374	120519158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120519200_120524400
ES.7032.111	chr11	-	3451	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106182.8	1104	3	-1673	-674	1086	674	multi-exon	FALSE	canonical	3	29	junction_2	164.5	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTGCGAGCCTACCG	8488	False	NA	NA	False	TATAAA	-32	NA	120523296	120519158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120521313
ES.7032.112	chr11	-	5259	2	ISM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	-72	3216	-72	674	intron_retention	FALSE	canonical	3	358	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCTGCGAGCCTACCG	7286	False	NA	NA	False	TATAAA	-32	NA	120524498	120519158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120520563_120520643
ES.7032.113	chr11	-	1576	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	-50	3397	-50	493	multi-exon	FALSE	canonical	3	302	junction_2	28	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCGTATACATGGA	7308	False	NA	NA	False	TATAAA	-36	NA	120524476	120519339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120524187
ES.7032.114	chr11	-	2888	4	NNC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	0	439	intron_retention	FALSE	canonical	0	0	junction_3	167.137335412794	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAGAGTATTTATAAAA	7402	False	NA	NA	False	ATTAAA	-34	NA	120524382	120519393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120520806_120522267_120524187
ES.7032.115	chr11	-	3858	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106180.2	732	3	-2462	-664	946	439	multi-exon	FALSE	canonical	2	7	junction_2	175.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAGAGTATTTATAAAA	8348	False	NA	NA	False	ATTAAA	-34	NA	120523436	120519393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120520811
ES.7032.116	chr11	-	1580	4	NNC	ENSMUSG00000051510.14	novel	840	4	NA	NA	5	439	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	162.359683008642	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAGAGTATTTATAAAA	7407	False	NA	NA	False	ATTAAA	-34	NA	120524377	120519393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120521313_120521471_120524187
ES.7032.117	chr11	-	4297	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106182.8	1104	3	-2755	-438	4	438	multi-exon	FALSE	canonical	3	29	junction_2	164.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGCAGAGTATTTATAAA	7406	False	NA	NA	False	ATTAAA	-33	NA	120524378	120519394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120521313
ES.7032.119	chr11	-	1598	4	NNC	ENSMUSG00000051510.14	novel	840	4	NA	NA	924	423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	162.359683008642	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAAAAAGCTG	8326	False	NA	NA	False	ATTAAA	-18	NA	120523458	120519409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120521313_120521501_120523264
ES.7032.120	chr11	-	3078	3	FSM	ENSMUSG00000051510.14	ENSMUST00000106182.8	1104	3	-2085	111	674	23	multi-exon	FALSE	canonical	3	29	junction_2	164.5	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATCTTCGTTGTCACGC	8076	False	NA	NA	False	NA	NA	NA	120523708	120519943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120521313
ES.7032.121	chr11	-	2600	9	NNC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	418.019362589821	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCACCTGGCTAGAACTG	NA	False	NA	NA	False	NA	NA	NA	120534578	120526539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532256_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.123	chr11	-	1555	9	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	9	-1057	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTAGACTACTTCCTGC	NA	False	NA	-11	True	NA	NA	NA	120534586	120527594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.124	chr11	-	1367	8	NIC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	1	-1059	combination_of_known_junctions	FALSE	canonical	2	43	junction_7	440.852976556556	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGATTAGACTACTTCCT	NA	False	NA	-13	True	NA	NA	NA	120534529	120527596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
ES.7032.125	chr11	-	1359	9	NNC	ENSMUSG00000025140.16	novel	2914	8	NA	NA	-11	-1219	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	413.57851431137	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCAGTGCTGTGAGGA	NA	False	NA	NA	False	AGTAAA	-16	NA	120534541	120527756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533706_120533789_120533984_120534114_120534505
ES.7032.126	chr11	-	3231	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	12	1511	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAACTGTGTGTGTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	120534562	120528730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
ES.7032.127	chr11	-	2702	9	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-7	1477	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.256170474084	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534581	120528764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120528824_120529466_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.128	chr11	-	2896	6	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-9	1477	intron_retention	FALSE	canonical	0	0	junction_1	390.247101206402	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534539	120528764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120528795_120530834_120532132_120532254_120532348_120532475_120533789_120533984_120534114_120534505
ES.7032.129	chr11	-	3305	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	33	-1477	-11	1477	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120534541	120528764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.13	chr11	-	3101	10	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	0	21	intron_retention	FALSE	canonical	3	99	junction_5	101.277884439512	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAACTGGAACCGGTC	NA	False	NA	15	True	AATAAA	-37	NA	120508736	120500891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120504204_120504250_120504466_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.130	chr11	-	2357	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-10	-486	-10	486	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAAAGGGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120534584	120529755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.131	chr11	-	4809	1	Genic_Genomic	ENSMUSG00000025140.16	novel	NA	NA	NA	NA	-6	470	mono-exon	FALSE	NA	NA	NA	NA	NA	593	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	120534580	120529771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120529800_120534600
ES.7032.132	chr11	-	1441	9	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	454	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	334.256170474084	593	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120534542	120529787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120530263_120531104_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.133	chr11	-	3251	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	434	intron_retention	FALSE	canonical	3	976	junction_5	21.7126691127553	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120534541	120529807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533789_120533984
ES.7032.134	chr11	-	3136	4	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-7	434	intron_retention	FALSE	canonical	3	43	junction_3	464.599469077039	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	120534581	120529807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532348_120532475_120533789_120534505
ES.7032.136	chr11	-	2466	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	2	intron_retention	FALSE	canonical	3	976	junction_5	20.8576125191739	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534542	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120533121_120533717_120533789_120533984
ES.7032.137	chr11	-	1854	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-9	2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	342.313318705635	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534583	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534505
ES.7032.138	chr11	-	1746	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	9	2	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	364.341148132107	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534586	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534505
ES.7032.139	chr11	-	3122	4	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	993	junction_3	17.5562587763516	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534525	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532348_120532475_120532698_120532940
ES.7032.14	chr11	-	2954	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-4	20	intron_retention	FALSE	canonical	3	48	junction_4	121.288457818541	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAAACTGGAACCGGT	NA	False	NA	14	True	AATAAA	-36	NA	120508743	120500892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.140	chr11	-	2325	5	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	2	intron_retention	FALSE	canonical	3	750	junction_4	116.140808934672	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534542	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.141	chr11	-	1860	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	343.012048339592	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534594	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534528
ES.7032.143	chr11	-	3314	3	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	2	intron_retention	FALSE	canonical	3	976	junction_2	29.5	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	False	NA	-14	True	AATAAA	-15	NA	120534542	120530239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120533789_120533984
ES.7032.144	chr11	-	3045	5	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-15	intron_retention	FALSE	canonical	3	976	junction_4	22.4318412084251	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAAATCC	NA	False	NA	-31	True	NA	NA	NA	120534541	120530256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120533789_120533984
ES.7032.146	chr11	-	1874	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-31	18	-10	-18	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534605	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.147	chr11	-	1823	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-13	-18	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	344.212736782452	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534543	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533706_120533789_120533984_120534114_120534505
ES.7032.148	chr11	-	3196	4	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	2	-18	intron_retention	FALSE	canonical	3	976	junction_3	25.3113940087595	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534572	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532348_120532475_120533789_120533984
ES.7032.149	chr11	-	1702	7	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-9	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	380.356411803456	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534583	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534526
ES.7032.15	chr11	-	2244	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-2	5	intron_retention	FALSE	canonical	3	184	junction_6	81.3758000472704	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCCCGACCCCGGGAA	NA	False	NA	-1	True	AATAAA	-21	NA	120508741	120500907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.150	chr11	-	2969	5	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-18	intron_retention	FALSE	canonical	3	750	junction_4	113.79806676741	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534541	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120532348_120532475_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.151	chr11	-	1795	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	7	-18	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	354.192326401395	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534567	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534528
ES.7032.152	chr11	-	1716	7	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	473.714283320888	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534572	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534537
ES.7032.153	chr11	-	1870	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	350.7691257677	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534597	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532250_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.154	chr11	-	1849	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	9	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	350.7691257677	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534586	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532481_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.156	chr11	-	2222	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	8	-18	intron_retention	FALSE	canonical	3	750	junction_5	108.096993482705	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534587	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532348_120532475_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.157	chr11	-	1856	8	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	8	-18	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	348.252664551683	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534488	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534406
ES.7032.158	chr11	-	3514	3	NNC	ENSMUSG00000025140.16	novel	605	5	NA	NA	5	-18	intron_retention	FALSE	canonical	3	27	junction_1	474.5	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534569	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120533118_120533717_120533789_120533984
ES.7032.159	chr11	-	2789	4	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	13	-18	intron_retention	FALSE	canonical	3	1022	junction_2	5.31245915016974	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534561	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120533121_120533717
ES.7032.16	chr11	-	3575	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-2	3	intron_retention	FALSE	canonical	3	226	junction_6	64.0893126816008	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCTCCCGACCCCGGG	NA	False	NA	-3	True	AATAAA	-19	NA	120508753	120500909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.160	chr11	-	1599	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-22	-18	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	486.884216215724	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534552	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120534505
ES.7032.161	chr11	-	3717	2	NIC	ENSMUSG00000025140.16	novel	605	5	NA	NA	1	-18	intron_retention	FALSE	canonical	3	1028	junction_1	0	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534573	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120533121_120533717
ES.7032.163	chr11	-	3731	3	FSM	ENSMUSG00000025140.16	ENSMUST00000133908.2	372	3	-48	-3311	-4	-18	multi-exon	FALSE	canonical	3	750	junction_2	113	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534578	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120533789_120533984_120534114_120534505
ES.7032.165	chr11	-	3123	4	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-18	intron_retention	FALSE	canonical	3	993	junction_3	17.5562587763516	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534541	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532698_120532940
ES.7032.166	chr11	-	1716	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-10	-18	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	366.328935369415	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534540	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.167	chr11	-	3473	5	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	3	-18	intron_retention	FALSE	canonical	3	750	junction_4	112.715349442744	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534571	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120532132_120532254_120532348_120532475_120533789_120533984_120534114_120534505
ES.7032.168	chr11	-	3197	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-8	-18	intron_retention	FALSE	canonical	3	750	junction_5	102.81945341228	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534538	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120532132_120532254_120532348_120532475_120532698_120532940_120533789_120533984_120534114_120534505
ES.7032.169	chr11	-	1807	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	350.7691257677	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534541	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532125_120532250_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.17	chr11	-	4446	9	NNC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	14	2	intron_retention	FALSE	canonical	0	0	junction_7	135.436331905438	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGGCTCCCGACCCCGG	NA	False	NA	-4	True	AATAAA	-18	NA	120508720	120500910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120504250_120504466_120506279_120506669_120506764_120508589
ES.7032.171	chr11	-	1847	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	10	-18	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	444.298621769326	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534585	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533706_120533789_120533984_120534096_120534505
ES.7032.172	chr11	-	2181	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-18	intron_retention	FALSE	canonical	3	750	junction_5	108.096993482705	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534541	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.173	chr11	-	1804	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-12	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	350.289151696022	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534542	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533114_120533717_120533789_120533984_120534114_120534505
ES.7032.174	chr11	-	1961	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	8	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	504.666185892886	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534488	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532250_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533981_120534114_120534308
ES.7032.176	chr11	-	3530	3	NIC	ENSMUSG00000025140.16	novel	840	7	NA	NA	356	-18	intron_retention	FALSE	canonical	3	976	junction_2	23	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534113	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120532348_120532475_120533789_120533984
ES.7032.177	chr11	-	3277	4	ISM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	-6	18	-6	-18	intron_retention	FALSE	canonical	3	1022	junction_2	6.12825877028341	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534580	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475
ES.7032.179	chr11	-	1771	7	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-2	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	380.356411803456	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534532	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120534406
ES.7032.180	chr11	-	2061	6	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-11	-18	intron_retention	FALSE	canonical	3	750	junction_5	105.479097455373	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534541	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120531175_120531967_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.181	chr11	-	1838	8	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	8	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	354.891130187434	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	False	NA	-34	True	NA	NA	NA	120534488	120530259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534406
ES.7032.19	chr11	-	2466	13	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	1	intron_retention	FALSE	canonical	1	2	junction_9	165.460720414242	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	-5	True	AATAAA	-17	NA	120508734	120500911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504247_120504466_120504604_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.2	chr11	-	1057	1	Antisense	novelGene_ENSMUSG00000025135.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCAACCACAACTCCTA	NA	False	NA	NA	False	NA	NA	NA	120496254	120495197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120495200_120496300
ES.7032.21	chr11	-	3266	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	1	intron_retention	FALSE	canonical	3	226	junction_6	61.9544994330517	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	-5	True	AATAAA	-17	NA	120508734	120500911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.24	chr11	-	4366	8	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-3	1	intron_retention	FALSE	canonical	3	384	junction_4	27.6479323506353	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	-5	True	AATAAA	-17	NA	120508742	120500911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.25	chr11	-	3871	10	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-5	1	intron_retention	FALSE	canonical	3	226	junction_5	66.0478689107705	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAGGCTCCCGACCCCG	NA	False	NA	-5	True	AATAAA	-17	NA	120508756	120500911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.26	chr11	-	3598	11	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	8	0	intron_retention	FALSE	canonical	0	0	junction_5	133.751448590286	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508726	120500912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503669_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.27	chr11	-	2968	11	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	24	junction_6	119.853452182238	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508750	120500912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120504247_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.28	chr11	-	2890	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	48	junction_7	111.309503437737	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508695	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.29	chr11	-	3124	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	-1	intron_retention	FALSE	canonical	3	184	junction_6	84.974959850846	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508734	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.3	chr11	-	2863	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	4	32	intron_retention	FALSE	canonical	3	226	junction_5	63.9421613647834	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCGGTCCACATCCGCCC	NA	False	NA	26	True	AAGAAA	-4	NA	120508691	120500880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.30	chr11	-	3717	9	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	17	-1	intron_retention	FALSE	canonical	3	226	junction_4	67.819613682179	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508678	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120503910_120504204_120504250_120504466_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.31	chr11	-	1642	12	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	139.299843075977	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508740	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506674_120506764_120508589
ES.7032.32	chr11	-	2277	13	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	14	-1	intron_retention	FALSE	canonical	1	2	junction_4	130.531924575306	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508720	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502300_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.33	chr11	-	4485	7	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	384	junction_3	23.8164275705283	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508694	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.34	chr11	-	1990	14	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	138.394556447997	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508691	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503671_120503910_120504204_120504247_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.35	chr11	-	1742	13	NNC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	116.707225092917	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508693	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503413_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.36	chr11	-	3158	10	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_9	140.378852475087	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508736	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508601
ES.7032.37	chr11	-	4369	9	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	316	junction_5	43.090022046873	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508735	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120504250_120504466_120506279_120506674_120506764_120508589
ES.7032.38	chr11	-	2113	12	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	25	-1	intron_retention	FALSE	canonical	3	99	junction_6	93.9507520015295	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508670	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.39	chr11	-	3834	10	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_8	172.13632266389	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508741	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502300_120502453_120502532_120502826_120503910_120504204_120504552_120505156_120506277_120506674_120506764_120508589
ES.7032.4	chr11	-	3069	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	29	intron_retention	FALSE	canonical	3	184	junction_6	86.2618538985601	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACCGGTCCACATCCG	NA	False	NA	23	True	AATAAA	-45	NA	120508733	120500883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.40	chr11	-	2107	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	184	junction_6	82.6291917746588	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508694	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.41	chr11	-	1758	13	NNC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.425602627446	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508692	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501799_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508595
ES.7032.42	chr11	-	1684	13	NNC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	137.046499610736	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508733	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506229_120506279_120506674_120506764_120508589
ES.7032.43	chr11	-	6604	7	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	226	junction_5	74.9777744846209	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508745	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502532_120502826_120503910_120504204_120504250_120504466
ES.7032.44	chr11	-	4445	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	226	junction_6	64.1594887760182	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508694	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674
ES.7032.45	chr11	-	6098	8	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	349	junction_5	37.3401354347532	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508763	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120504250_120504466_120504552_120505156
ES.7032.46	chr11	-	4181	8	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_6	151.363058604813	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508701	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120502005_120502173_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506669_120506764_120508589
ES.7032.49	chr11	-	2485	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	184	junction_5	84.7049326771157	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508693	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.5	chr11	-	2697	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-3	29	intron_retention	FALSE	canonical	3	226	junction_6	61.2106510474516	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACCGGTCCACATCCG	NA	False	NA	23	True	AATAAA	-45	NA	120508742	120500883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.50	chr11	-	2846	11	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	2	junction_8	165.234409249405	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508742	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504247_120504466_120504552_120505156_120505224_120506229_120506279_120506674_120506764_120508589
ES.7032.51	chr11	-	4248	9	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	0	-1	intron_retention	FALSE	canonical	3	316	junction_5	45.4580850894536	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTAGGCTCCCGACCC	NA	False	NA	-7	True	AATAAA	-15	NA	120508695	120500913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502532_120502826_120502910_120503288_120504250_120504466_120506279_120506674_120506764_120508589
ES.7032.52	chr11	-	4017	9	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	4	-2	intron_retention	FALSE	canonical	3	226	junction_4	69.5265237157734	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGTAGGCTCCCGACC	NA	False	NA	-8	True	AATAAA	-14	NA	120508691	120500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120503910_120504204_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.53	chr11	-	4740	7	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	11	-2	intron_retention	FALSE	canonical	3	384	junction_4	27.9488620320916	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGTAGGCTCCCGACC	NA	False	NA	-8	True	AATAAA	-14	NA	120508723	120500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120504250_120504466_120504552_120505156_120506764_120508589
ES.7032.54	chr11	-	3829	13	ISM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	-124	2	-124	-2	intron_retention	FALSE	canonical	3	184	junction_7	82.3775185081194	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTGTAGGCTCCCGACC	NA	False	NA	-8	True	AATAAA	-14	NA	120508886	120500914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674
ES.7032.55	chr11	-	3792	9	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	316	junction_4	47.5282810545469	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTGTAGGCTCCCGAC	NA	False	NA	-9	True	AATAAA	-13	NA	120508742	120500915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501791_120501938_120502005_120502173_120502532_120502826_120502910_120503288_120504250_120504466_120504552_120505156_120506279_120506674_120506764_120508589
ES.7032.56	chr11	-	2478	11	NIC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	99	junction_5	98.1063198779773	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTGTAGGCTCCCGAC	NA	False	NA	-9	True	AATAAA	-13	NA	120508742	120500915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.57	chr11	-	1815	14	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	123.773652930514	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTCTGTAGGCTCCCG	NA	False	NA	-11	True	AATAAA	-11	NA	120508693	120500917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501799_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.58	chr11	-	2470	11	NNC	ENSMUSG00000025137.16	novel	1486	13	NA	NA	-6	-5	intron_retention	FALSE	non_canonical	0	0	junction_10	149.808544482616	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTCTGTAGGCTCCCG	NA	False	NA	-11	True	AATAAA	-11	NA	120508745	120500917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508598
ES.7032.6	chr11	-	1847	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	-8	-353	3	23	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTGGAACCGGTCCA	NA	False	NA	17	True	AATAAA	-39	NA	120508759	120500889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.60	chr11	-	2700	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	5	-6	intron_retention	FALSE	canonical	3	48	junction_5	115.688024480775	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTCTGTAGGCTCCC	NA	False	NA	-12	True	AATAAA	-10	NA	120508729	120500918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.61	chr11	-	933	3	FSM	ENSMUSG00000025137.16	ENSMUST00000126148.2	513	3	3	-423	1	423	multi-exon	FALSE	canonical	3	395	junction_2	25	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAAAACAAACCCTGT	NA	False	NA	NA	False	NA	NA	NA	120508733	120505578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120506279_120506674_120506764_120508589
ES.7032.62	chr11	-	3142	1	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	14	423	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAAAACAAACCCTGT	NA	False	NA	NA	False	NA	NA	NA	120508720	120505578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120505600_120508700
ES.7032.63	chr11	-	1879	9	NNC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	-1	20801	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	334.256170474084	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGGGCGTGGTAGCGC	NA	False	NA	NA	False	NA	NA	NA	120534575	120505736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120505752_120530239_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.64	chr11	-	1651	1	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	-3	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAGCAGCTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	120508742	120507091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120507100_120508700
ES.7032.65	chr11	-	6715	12	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1727	10	NA	NA	0	7	intron_retention	FALSE	canonical	2	54	junction_9	102.693799856299	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGATGACTGTCACACGC	7402	False	NA	6	True	ATTAAA	-22	NA	120524382	120509190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702_120520563_120520643_120520708_120524187
ES.7032.66	chr11	-	1893	12	NNC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	17	0	intron_retention	FALSE	canonical	0	0	junction_2	30.3864911264069	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515778	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120509876_120509974_120510117_120510508_120510595_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ES.7032.67	chr11	-	9477	2	FSM	ENSMUSG00000025138.15_ENSMUSG00000051510.14	ENSMUST00000130743.2	726	2	-5133	-3618	2213	0	multi-exon	FALSE	canonical	3	59	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120518761	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120512880_120512966
ES.7032.68	chr11	-	1846	9	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	54	junction_8	11.7260393995586	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515817	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120509876_120510988_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ES.7032.69	chr11	-	3036	7	NIC	ENSMUSG00000025138.15	novel	1755	9	NA	NA	-3	0	intron_retention	FALSE	canonical	2	54	junction_6	12.5033328890074	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515821	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120511096_120511249_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ES.7032.7	chr11	-	1895	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	9	-23	-2	23	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTGGAACCGGTCCA	NA	False	NA	17	True	AATAAA	-39	NA	120508753	120500889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.70	chr11	-	6888	5	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1727	10	NA	NA	2245	0	intron_retention	FALSE	canonical	0	0	junction_3	34.0036762718386	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120518729	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120509876_120510988_120511096_120511249_120511331_120511782_120511882_120512806
ES.7032.71	chr11	-	1790	9	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_8	11.3109460258636	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515825	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515637_120515702
ES.7032.72	chr11	-	6782	11	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1727	10	NA	NA	-8	0	intron_retention	FALSE	canonical	2	56	junction_8	105.806238001358	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	7394	False	NA	-1	True	ATTAAA	-15	NA	120524390	120509197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120520563_120520643_120520708_120524187
ES.7032.73	chr11	-	1653	10	NNC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	0	0	junction_9	23.8999974172218	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	NA	False	NA	-2	True	ATTAAA	-14	NA	120515812	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515747
ES.7032.74	chr11	-	2344	4	NIC	ENSMUSG00000025138.15	novel	1218	6	NA	NA	-65	-1	intron_retention	FALSE	canonical	3	9	junction_1	34.8839345385363	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	NA	False	NA	-2	True	ATTAAA	-14	NA	120511868	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120509876_120509974_120511096_120511249_120511710_120511782
ES.7032.75	chr11	-	6931	10	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1868	10	NA	NA	-16	-1	intron_retention	FALSE	canonical	2	56	junction_7	110.31067239594	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	7386	False	NA	-2	True	ATTAAA	-14	NA	120524398	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120509876_120510988_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120520563_120520643_120520708_120524187
ES.7032.76	chr11	-	1853	11	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	0	-1	intron_retention	FALSE	canonical	2	6	junction_2	26.3286915740224	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	NA	False	NA	-2	True	ATTAAA	-14	NA	120515825	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ES.7032.77	chr11	-	1966	10	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	-1	-1	intron_retention	FALSE	canonical	2	6	junction_2	27.022624266015	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	NA	False	NA	-2	True	ATTAAA	-14	NA	120515796	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ES.7032.78	chr11	-	1850	10	NNC	ENSMUSG00000025138.15	novel	1868	10	NA	NA	-2	-1	intron_retention	FALSE	canonical	1	2	junction_1	29.8923996285938	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCCCGATGACTG	NA	False	NA	-2	True	ATTAAA	-14	NA	120515812	120509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120509876_120510508_120510595_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498
ES.7032.8	chr11	-	2976	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	1	22	intron_retention	FALSE	canonical	3	226	junction_5	62.8630256987365	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAACTGGAACCGGTCC	NA	False	NA	16	True	AATAAA	-38	NA	120508733	120500890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.81	chr11	-	5022	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	-99	0	-99	0	multi-exon	FALSE	canonical	3	302	junction_2	28	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7259	False	NA	-1	True	AATAAA	-16	NA	120524525	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120524187
ES.7032.82	chr11	-	8375	2	ISM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	28	0	-16	0	intron_retention	FALSE	canonical	3	358	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7386	False	NA	-1	True	AATAAA	-16	NA	120524398	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120520563_120520643
ES.7032.83	chr11	-	6335	4	NIC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_3	167.137335412794	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7401	False	NA	-1	True	AATAAA	-16	NA	120524383	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120520563_120520643_120520708_120520811_120522267_120524187
ES.7032.84	chr11	-	4926	4	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	840	4	NA	NA	-16	0	multi-exon	FALSE	canonical	2	3	junction_3	166.413808187769	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7386	False	NA	-1	True	AATAAA	-16	NA	120524398	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120520811_120520843_120524187
ES.7032.85	chr11	-	4458	4	NNC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	157.234432191765	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7405	False	NA	-1	True	AATAAA	-16	NA	120524379	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120519659_120520076_120520563_120520643_120520708_120524187
ES.7032.86	chr11	-	4976	2	NIC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	-16	0	intron_retention	FALSE	canonical	3	302	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7386	False	NA	-1	True	AATAAA	-16	NA	120524398	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120520708_120524187
ES.7032.87	chr11	-	7768	3	FSM	ENSMUSG00000025138.15_ENSMUSG00000051510.14	ENSMUST00000106182.8	1104	3	-2774	-3890	-15	0	multi-exon	FALSE	canonical	3	29	junction_2	164.5	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7387	False	NA	-1	True	AATAAA	-16	NA	120524397	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120520563_120520643_120520708_120521313
ES.7032.88	chr11	-	5106	3	NNC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	175	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7440	False	NA	-1	True	AATAAA	-16	NA	120524344	120515942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120520563_120520643_120520708_120523922
ES.7032.89	chr11	-	4027	2	NNC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	625	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGGTATTTCTTTGA	NA	False	NA	-2	True	AATAAA	-15	NA	120520349	120515943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120518100_120518478
ES.7032.9	chr11	-	2136	13	NNC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	3	22	intron_retention	FALSE	canonical	0	0	junction_2	128.749649406211	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAACTGGAACCGGTCC	NA	False	NA	16	True	AATAAA	-38	NA	120508692	120500890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120501598_120501701_120501799_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ES.7032.90	chr11	-	8448	1	NIC	ENSMUSG00000051510.14	novel	4923	3	NA	NA	-9	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGGTATTTCTTTGA	7393	False	NA	-2	True	AATAAA	-15	NA	120524391	120515943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120515900_120524400
ES.7032.92	chr11	-	5139	4	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	840	4	NA	NA	191	-1	multi-exon	FALSE	canonical	0	0	junction_3	162.359683008642	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGGTATTTCTTTGA	7593	False	NA	-2	True	AATAAA	-15	NA	120524191	120515943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120521313_120521501_120523922
ES.7032.93	chr11	-	6154	10	Fusion	ENSMUSG00000025140.16_ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1861	8	NA	NA	-12	-1	intron_retention	FALSE	canonical	0	0	junction_2	446.935601735603	1148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGGTATTTCTTTGA	NA	False	NA	-2	True	AATAAA	-15	NA	120534542	120515943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120524867_120524910_120525041_120525178_120531025_120531175_120531967_120532698_120532940_120533118_120533717_120533789_120533984_120534114_120534505
ES.7032.94	chr11	-	5026	4	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	840	4	NA	NA	8	-2	multi-exon	FALSE	non_canonical	0	0	junction_3	162.359683008642	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGTGGTATTTCTTTG	7410	False	NA	-3	True	AATAAA	-14	NA	120524374	120515944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120521313_120521471_120524187
ES.7032.96	chr11	-	5075	4	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	840	4	NA	NA	-12	-3	multi-exon	FALSE	canonical	2	2	junction_3	161.831874349757	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGTGGTATTTCTTT	7390	False	NA	-4	True	AATAAA	-13	NA	120524394	120515945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120521313_120521501_120524187
ES.7032.98	chr11	-	5638	10	Fusion	ENSMUSG00000025140.16_ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1861	8	NA	NA	-7	-7	multi-exon	FALSE	canonical	0	0	junction_2	351.479026647166	1148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATCTGGTGGTATTT	NA	False	NA	-8	True	AATAAA	-9	NA	120534537	120515949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520563_120520643_120520708_120531104_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ES.7032.99	chr11	-	6596	2	Fusion	ENSMUSG00000025138.15_ENSMUSG00000051510.14	novel	1104	3	NA	NA	1231	-7	intron_retention	FALSE	canonical	3	29	junction_1	0	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATCTGGTGGTATTT	8633	False	NA	-8	True	AATAAA	-9	NA	120523151	120515949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120520708_120521313
ES.7033.1	chr11	-	4706	6	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	785	4	intron_retention	FALSE	canonical	3	110	junction_2	7.55248303539968	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCACCCTGAACCTTG	9709	False	NA	NA	False	ATTAAA	-25	NA	120550647	120544609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120546738_120547157_120547259_120547385_120548422_120548711_120549218_120549475
ES.7033.10	chr11	-	6580	1	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	235	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCCAGAAGCTCACCCT	10031	False	NA	NA	False	ATTAAA	-17	NA	120551197	120544617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120544600_120551200
ES.7033.11	chr11	-	4661	7	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-82	-4	intron_retention	FALSE	canonical	3	97	junction_6	7.83156008298049	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCCAGAAGCTCACCCT	9714	False	NA	NA	False	ATTAAA	-17	NA	120551514	120544617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120548422_120548711_120549218_120549475_120549572_120549650
ES.7033.12	chr11	-	2026	12	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-58	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	42.5846750070321	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9515	False	NA	NA	False	AATATA	-45	NA	120551713	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548750_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551614
ES.7033.15	chr11	-	2241	13	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-773	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	34.6189575553947	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9931	False	NA	NA	False	AATATA	-45	NA	120552774	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552715
ES.7033.16	chr11	-	5809	8	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-807	-23	intron_retention	FALSE	canonical	3	97	junction_7	9.83745445753532	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9897	False	NA	NA	False	AATATA	-45	NA	120552808	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120548422_120548711_120549218_120549475_120549572_120549650
ES.7033.19	chr11	-	5467	7	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-82	-23	intron_retention	FALSE	canonical	3	97	junction_6	10.5987420637231	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9714	False	NA	NA	False	AATATA	-45	NA	120551514	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120546738_120547157_120547259_120547385_120548422_120548711_120549218_120549475_120549572_120549650
ES.7033.2	chr11	-	3617	8	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	72	0	intron_retention	FALSE	canonical	3	96	junction_7	9.16069688107508	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9645	False	NA	NA	False	ATTAAA	-21	NA	120551583	120544613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120548422_120548711_120549218_120549475_120549572_120549650_120549704_120550820
ES.7033.20	chr11	-	3489	14	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-5948	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	42.4782575780117	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	5370	False	NA	NA	False	AATATA	-45	NA	120557949	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120556151_120556280_120556770
ES.7033.21	chr11	-	2336	13	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-908	-23	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	31.8612443085465	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9796	False	NA	NA	False	AATATA	-45	NA	120552909	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552755
ES.7033.22	chr11	-	6324	4	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	126	-23	intron_retention	FALSE	canonical	3	110	junction_2	5.31245915016974	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9353	False	NA	NA	False	AATATA	-45	NA	120551875	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120546738_120547157_120549218_120549475
ES.7033.23	chr11	-	2227	13	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-409	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	41.3665021484776	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	8818	False	NA	NA	False	AATATA	-45	NA	120552410	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552286
ES.7033.24	chr11	-	1835	10	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-788	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.8944441288237	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9916	False	NA	NA	False	AATATA	-45	NA	120552789	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120547157_120547259_120548318_120548440_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552755
ES.7033.25	chr11	-	3418	10	NIC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-288	-23	intron_retention	FALSE	canonical	3	54	junction_9	21.1157889554209	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	8939	False	NA	NA	False	AATATA	-45	NA	120552289	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120548422_120548711_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946
ES.7033.26	chr11	-	4799	9	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-354	-23	intron_retention	FALSE	canonical	1	1	junction_8	38.7586683852787	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	8873	False	NA	NA	False	AATATA	-45	NA	120552355	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120549218_120549475_120549572_120549650_120552181_120552286
ES.7033.27	chr11	-	2101	11	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-793	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	43.3480103349623	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9911	False	NA	NA	False	AATATA	-45	NA	120552794	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552755
ES.7033.28	chr11	-	2133	12	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	123	-23	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	40.1431323439037	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9350	False	NA	NA	False	AATATA	-45	NA	120551878	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551614
ES.7033.29	chr11	-	2173	10	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-43	-23	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	36.5709187574695	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9753	False	NA	NA	False	AATATA	-45	NA	120551475	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120549156_120549218_120549475_120549572_120549650_120549704_120550820
ES.7033.30	chr11	-	2060	12	FSM	ENSMUSG00000042988.11	ENSMUST00000106178.9	2012	12	-71	23	-71	-23	multi-exon	FALSE	canonical	2	9	junction_11	31.1782399219087	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9502	False	NA	NA	False	AATATA	-45	NA	120551726	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551614
ES.7033.31	chr11	-	2360	11	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-48	-23	intron_retention	FALSE	canonical	1	1	junction_7	43.3844442167927	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	9525	False	NA	NA	False	AATATA	-45	NA	120551703	120544636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120548750_120549156_120549218_120549475_120549572_120549650_120549704_120550820
ES.7033.35	chr11	-	4204	9	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-17	14	intron_retention	FALSE	canonical	0	0	junction_7	41.9821390593667	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTTTCTTAATAATT	9210	False	NA	NA	False	AATATA	-25	NA	120552018	120544656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120548422_120548711_120549218_120549475_120549532_120549650_120551192_120551946
ES.7033.4	chr11	-	3467	10	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-17	0	intron_retention	FALSE	canonical	2	13	junction_5	36.1754981536767	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9210	False	NA	NA	False	ATTAAA	-21	NA	120552018	120544613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120549218_120549475_120549572_120549650_120551192_120551946
ES.7033.5	chr11	-	2680	10	NIC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-82	0	intron_retention	FALSE	canonical	3	96	junction_9	10.4680584118346	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9714	False	NA	NA	False	ATTAAA	-21	NA	120551514	120544613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120549218_120549475_120549572_120549650_120549704_120550820
ES.7033.6	chr11	-	2644	10	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	98	0	intron_retention	FALSE	canonical	2	13	junction_5	32.9342779891509	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9671	False	NA	NA	False	ATTAAA	-21	NA	120551557	120544613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120549218_120549475_120549572_120549650_120549704_120550820
ES.7033.7	chr11	-	2629	14	NNC	ENSMUSG00000042988.11	novel	2012	12	NA	NA	-782	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	42.4782575780117	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9922	False	NA	NA	False	ATTAAA	-21	NA	120552783	120544613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551946_120552181_120552285_120552373_120552446
ES.7033.9	chr11	-	3948	10	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	27	-4	intron_retention	FALSE	canonical	0	0	junction_5	54.7433969184672	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCCAGAAGCTCACCCT	9254	False	NA	NA	False	ATTAAA	-17	NA	120551974	120544617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547865_120548318_120548422_120549156_120549218_120549475_120549572_120549650_120549704_120549850
ES.7034.1	chr11	-	1186	1	Antisense	novelGene_ENSMUSG00000025142.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGAGTTTGCGTGTTCT	9594	False	NA	NA	False	NA	NA	NA	120564115	120562929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120562900_120564100
ES.7034.2	chr11	-	519	1	Intergenic	novelGene_5683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTGTGTCTGTGGAAG	9946	False	NA	NA	False	NA	NA	NA	120563763	120563244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120563200_120563800
ES.7035.1	chr11	-	176	1	Intergenic	novelGene_5685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	673	False	NA	NA	False	NA	NA	NA	120580919	120580743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120580700_120580900
ES.7036.1	chr11	-	3255	1	Antisense	novelGene_ENSMUSG00000025142.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAACAAACAAAAAACCAG	1550	False	NA	NA	False	NA	NA	NA	120596966	120593711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120593700_120597000
ES.7037.1	chr11	-	2715	2	ISM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	-1	0	1	intron_retention	FALSE	canonical	3	897	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCTTTGCCAT	NA	False	NA	-1	True	AATAAA	-20	NA	120604564	120601766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120602133_120602215
ES.7037.11	chr11	-	2367	4	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	29	1	29	0	intron_retention	FALSE	canonical	3	724	junction_3	77.8559924190525	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604529	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669
ES.7037.13	chr11	-	879	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	-9	3	-3	-2	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCCTGCTTTCTCTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	120604567	120601770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
ES.7037.14	chr11	-	623	5	NNC	ENSMUSG00000025144.18	novel	873	6	NA	NA	-2	-115	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	439.791641007421	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAAGCTGCTGTGTAG	NA	False	NA	-118	True	AATAAA	-35	NA	120604560	120601883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120602133_120602215_120602305_120602528_120602583_120603265_120603455_120604518
ES.7037.2	chr11	-	632	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	-25	-1	-25	1	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCTTTGCCAT	NA	False	NA	-1	True	AATAAA	-20	NA	120604589	120601766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ES.7037.3	chr11	-	2490	3	ISM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	1	-1	1	1	intron_retention	FALSE	canonical	3	880	junction_2	8.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTTCTCTTTGCCAT	NA	False	NA	-1	True	AATAAA	-20	NA	120604563	120601766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120602133_120602215_120602305_120602528
ES.7037.4	chr11	-	577	4	NIC	ENSMUSG00000025144.18	novel	692	4	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604588	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
ES.7037.5	chr11	-	687	4	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	1	0	intron_retention	FALSE	canonical	3	556	junction_3	132.30268326833	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604563	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120602305_120602528_120602583_120602669_120602722_120604518
ES.7037.7	chr11	-	2795	1	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604563	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120601800_120604600
ES.7037.8	chr11	-	705	4	FSM	ENSMUSG00000025144.18	ENSMUST00000026137.8	692	4	-13	0	-13	0	multi-exon	FALSE	canonical	3	556	junction_3	156.895577446346	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604577	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120602133_120602215_120602305_120602528_120602722_120604518
ES.7037.9	chr11	-	589	5	NNC	ENSMUSG00000025144.18	novel	606	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	330.531390339859	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604563	120601768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120602118_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ES.7038.1	chr11	+	2518	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	-26	0	-26	0	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6038	False	NA	NA	False	GATAAA	-1	NA	120604724	120611954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.10	chr11	+	3606	13	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	-1	intron_retention	FALSE	canonical	3	45	junction_8	5.87544324569077	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATTCTCGTCCAGTTC	6090	False	NA	NA	False	AATACA	-18	NA	120604776	120611948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.11	chr11	+	3429	15	NNC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_9	23.2922865396444	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATTCTCGTCCAGTT	6090	False	NA	NA	False	AATACA	-17	NA	120604776	120611947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609073_120609148_120609250_120609380_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.12	chr11	+	2510	18	NNC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.7075434045947	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTCGTCCAGTTCCT	6090	False	NA	NA	False	AATACA	-20	NA	120604776	120611950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608466_120608593_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.13	chr11	+	3997	15	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	2	2	intron_retention	FALSE	canonical	3	45	junction_10	6.07604866232478	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6092	False	NA	NA	False	AATACA	-21	NA	120604778	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.14	chr11	+	2332	17	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	14.5911734877631	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6092	False	NA	NA	False	AATACA	-21	NA	120604778	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.15	chr11	+	4120	13	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	2	-3	intron_retention	FALSE	canonical	3	3	junction_6	15.1242538842601	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAAATTCTCGTCCAGT	6092	False	NA	NA	False	AATACA	-16	NA	120604778	120611946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120607995_120608305_120608365_120608862_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.16	chr11	+	4110	15	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	36	junction_10	7.61208759480738	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6092	False	NA	NA	False	GATAAA	-1	NA	120604778	120611954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.17	chr11	+	4799	12	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	9	2	intron_retention	FALSE	canonical	3	45	junction_7	5.98897057890931	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6099	False	NA	NA	False	AATACA	-21	NA	120604785	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.18	chr11	+	2966	16	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	13	-2	intron_retention	FALSE	canonical	3	8	junction_1	12.908223046656	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATTCTCGTCCAGTT	6103	False	NA	NA	False	AATACA	-17	NA	120604789	120611947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120604993_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.19	chr11	+	4449	13	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	13	-2	intron_retention	FALSE	canonical	3	45	junction_9	6.35522532164587	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATTCTCGTCCAGTT	6103	False	NA	NA	False	AATACA	-17	NA	120604789	120611947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608365_120608650_120608999_120609069_120609148_120609267_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.2	chr11	+	4074	13	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	-4	0	intron_retention	FALSE	canonical	3	3	junction_7	15.0672105359066	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6060	False	NA	NA	False	GATAAA	-1	NA	120604746	120611954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608365_120608862_120608999_120609069_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.20	chr11	+	2357	17	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	13	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	13.8963799242824	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6103	False	NA	NA	False	AATACA	-21	NA	120604789	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.21	chr11	+	2462	17	NNC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	18.6747448108401	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6104	False	NA	NA	False	AATACA	-21	NA	120604790	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606845_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.22	chr11	+	4196	19	Fusion	ENSMUSG00000018012.12_ENSMUSG00000025145.14	novel	2492	18	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_11	17.6446403571547	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	6124	False	NA	14	True	AATAAA	-14	NA	120604810	120614795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608862_120608999_120609069_120609148_120609267_120609380_120610291_120610385_120610759_120610934_120611011_120611160_120611443_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ES.7038.23	chr11	+	4930	4	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	1739	-2	intron_retention	FALSE	canonical	3	45	junction_2	4.92160768674447	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATTCTCGTCCAGTT	7856	False	NA	NA	False	AATACA	-17	NA	120606542	120611947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120608999_120609069_120609148_120609267_120611160_120611443
ES.7038.24	chr11	+	2888	10	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	-1443	2	intron_retention	FALSE	canonical	3	3	junction_2	17.1493080161299	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	8211	False	NA	NA	False	AATACA	-21	NA	120606897	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120607995_120608305_120608365_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.25	chr11	+	5828	8	Fusion	ENSMUSG00000018012.12_ENSMUSG00000025145.14	novel	1076	6	NA	NA	-1158	0	intron_retention	FALSE	canonical	3	29	junction_4	11.0822527732683	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	8496	False	NA	14	True	AATAAA	-14	NA	120607182	120614795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_+_120607995_120608305_120610934_120611011_120611160_120611443_120612468_120613056_120613129_120613334_120613453_120613631_120614167_120614304
ES.7038.26	chr11	+	1089	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	-12	-1	-12	1	multi-exon	FALSE	canonical	3	29	junction_1	12.4739729036101	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCGCTGTCTGCCCT	3786	False	NA	15	True	AATAAA	-15	NA	120612283	120614796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ES.7038.27	chr11	+	1026	6	FSM	ENSMUSG00000018012.12	ENSMUST00000142229.2	589	6	-74	-363	29	0	multi-exon	FALSE	canonical	1	1	junction_1	23.4486673395313	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3827	False	NA	14	True	AATAAA	-14	NA	120612324	120614795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120612447_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ES.7038.28	chr11	+	1108	6	NNC	ENSMUSG00000018012.12	novel	717	5	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.8444962203021	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	4252	False	NA	14	True	AATAAA	-14	NA	120612749	120614795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120612954_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ES.7038.3	chr11	+	2599	18	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	12.9044934637937	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6062	False	NA	NA	False	GATAAA	-1	NA	120604748	120611954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120604993_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.4	chr11	+	4829	10	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	9	-2	intron_retention	FALSE	canonical	3	48	junction_4	5.82671582316751	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAATTCTCGTCCAGTT	6073	False	NA	NA	False	AATACA	-17	NA	120604759	120611947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120607995_120608305_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.5	chr11	+	3212	15	NIC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	-7	0	intron_retention	FALSE	canonical	3	36	junction_10	7.08728381234551	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6083	False	NA	NA	False	GATAAA	-1	NA	120604769	120611954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.6	chr11	+	2593	18	NNC	ENSMUSG00000025145.14	novel	2492	18	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	14.2908492995491	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTCTCGTCCAGTTCC	6084	False	NA	NA	False	AATACA	-19	NA	120604770	120611949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609673_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.7	chr11	+	3903	16	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	36	junction_11	7.43385648383275	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6090	False	NA	NA	False	AATACA	-21	NA	120604776	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.8	chr11	+	2878	16	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	2	intron_retention	FALSE	canonical	3	45	junction_11	6.07581727470104	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCGTCCAGTTCCTT	6090	False	NA	NA	False	AATACA	-21	NA	120604776	120611951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7038.9	chr11	+	2703	16	NIC	ENSMUSG00000025145.14	novel	2390	17	NA	NA	0	1	intron_retention	FALSE	canonical	3	3	junction_8	13.9322168611699	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCTCGTCCAGTTCCT	6090	False	NA	NA	False	AATACA	-20	NA	120604776	120611950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ES.7039.1	chr11	-	2016	1	Antisense	novelGene_ENSMUSG00000018012.12_AS_novelGene_ENSMUSG00000025145.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCGTCTCCCACTGAAC	5303	False	NA	NA	False	AATAAA	-15	NA	120612611	120610595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120610600_120612600
ES.704.1	chr1	-	120	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATTACATAA	5468	False	NA	NA	False	NA	NA	NA	72278841	72278721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72278700_72278800
ES.7040.1	chr11	-	1157	7	NNC	ENSMUSG00000039450.12	novel	914	7	NA	NA	198	853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.679619733841	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAGCTGTTTCACTGG	7128	False	NA	NA	False	NA	NA	NA	120617857	120615371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120616015_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824
ES.7040.2	chr11	-	1246	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	14	-368	14	368	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGTGAGAATCCTGGT	9998	False	NA	NA	False	NA	NA	NA	120618093	120615856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ES.7040.3	chr11	-	912	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	6	-26	6	26	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGGTGTTGCCTGGTT	9990	False	NA	22	True	NA	NA	NA	120618101	120616198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ES.7040.4	chr11	-	903	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	-75	2	-37	-2	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACAGATCTGTGCTATC	9947	False	NA	-6	True	AATAAA	-35	NA	120618144	120616226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ES.7040.5	chr11	-	937	7	FSM	ENSMUSG00000039450.12	ENSMUST00000125242.8	910	7	-5	-22	-5	-4	multi-exon	FALSE	canonical	3	81	junction_3	12.2202018532156	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCACAGATCTGTGCTA	6910	False	NA	-8	True	AATAAA	-33	NA	120618075	120616228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617138_120617236_120617392_120617824_120617923_120618003
ES.7040.6	chr11	-	1302	7	NIC	ENSMUSG00000039450.12	novel	892	8	NA	NA	16	-7	intron_retention	FALSE	canonical	3	81	junction_3	10.3239204439657	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGGCACAGATCTGTG	10000	False	NA	-11	True	AATAAA	-30	NA	120618091	120616231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617923_120618003
ES.7041.1	chr11	+	212	1	Intergenic	novelGene_5686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTAAGAGTCTTGCCA	9478	False	NA	NA	False	NA	NA	NA	120626788	120627000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120626800_120627000
ES.7042.1	chr11	+	3179	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	-1551	-2	-1551	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1531	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAAGAGTCCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120652068	120655247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120652100_120655200
ES.7042.2	chr11	+	1595	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	-2	0	multi-exon	FALSE	canonical	3	1960	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACAAGAGTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	120653617	120655245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653817_120653849
ES.7042.3	chr11	+	1300	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	0	326	0	-326	mono-exon	FALSE	NA	NA	NA	NA	NA	1505	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCATCCTCCTGAAT	NA	False	NA	NA	False	NA	NA	NA	120653619	120654919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120653600_120654900
ES.7042.4	chr11	+	1476	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	-32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGACAGTCAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	120653619	120655213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653764_120653881
ES.7042.5	chr11	+	1165	3	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	-34	multi-exon	FALSE	non_canonical	0	0	junction_2	980	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGACAGTCAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	120653619	120655211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653817_120653849_120653921_120654314
ES.7042.6	chr11	+	893	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	-30	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	120653619	120655215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653763_120654465
ES.7042.7	chr11	+	1399	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	-194	multi-exon	FALSE	canonical	3	1960	junction_1	0	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCAGAGTGAGGATGGG	NA	False	NA	NA	False	NA	NA	NA	120653619	120655051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653817_120653849
ES.7042.8	chr11	+	1550	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACAAGAGTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	120653619	120655245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120654492_120654567
ES.7042.9	chr11	+	975	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	91	-33	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGACAGTCAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	120653710	120655212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_120653884_120654410
ES.7043.1	chr11	-	172	1	Intergenic	novelGene_5687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTAGTTAAAGAAGGT	NA	False	NA	NA	False	NA	NA	NA	120661381	120661209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120661200_120661400
ES.7044.1	chr11	-	165	1	Intergenic	novelGene_5688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAGAAAAAAA	9686	False	NA	NA	False	NA	NA	NA	120663516	120663351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120663400_120663500
ES.7045.10	chr11	+	1929	13	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	682	junction_1	159.983050317491	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1400	False	NA	0	True	ATTAAA	-17	NA	120675106	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679423_120679495
ES.7045.11	chr11	+	3088	5	NIC	ENSMUSG00000025156.18	novel	1925	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	682	junction_1	184.697556832785	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1400	False	NA	1	True	ATTAAA	-18	NA	120675106	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120677676_120677834_120677896_120678205
ES.7045.13	chr11	+	3158	7	NNC	ENSMUSG00000025156.18	novel	1925	13	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	418.43308903575	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1401	False	NA	0	True	ATTAAA	-17	NA	120675107	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678520_120678969_120679069
ES.7045.14	chr11	+	2924	10	NIC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	682	junction_1	169.372334382924	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1401	False	NA	1	True	ATTAAA	-18	NA	120675107	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.15	chr11	+	2903	10	NIC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	121	junction_3	340.910545451442	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1408	False	NA	1	True	ATTAAA	-18	NA	120675114	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.19	chr11	+	2178	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	21	-274	-9	269	multi-exon	FALSE	canonical	3	682	junction_1	150.079122650539	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTTCATTGGCTGCC	1415	False	NA	NA	False	AGTAAA	-19	NA	120675121	120680197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.2	chr11	+	1957	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	-27	-5	-24	0	multi-exon	TRUE	canonical	3	682	junction_1	150.079122650539	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1367	False	NA	2	True	ATTAAA	-19	NA	120675073	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.20	chr11	+	2392	9	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-8	2	intron_retention	FALSE	canonical	3	682	junction_1	182.166647605976	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1416	False	NA	-1	True	ATTAAA	-16	NA	120675122	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677514_120677597_120677676_120677834_120677896_120678205_120678969_120679069_120679423_120679495
ES.7045.21	chr11	+	1875	14	NNC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	324.587202568133	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1416	False	NA	1	True	ATTAAA	-18	NA	120675122	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678481_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.23	chr11	+	2317	13	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	682	junction_1	159.36930817723	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1418	False	NA	0	True	ATTAAA	-17	NA	120675124	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.25	chr11	+	4801	1	NIC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	-5	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1419	False	NA	0	True	ATTAAA	-17	NA	120675125	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675100_120679900
ES.7045.26	chr11	+	3305	7	NIC	ENSMUSG00000025156.18	novel	1925	13	NA	NA	-5	2	intron_retention	FALSE	canonical	3	682	junction_1	184.480727689612	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1419	False	NA	-1	True	ATTAAA	-16	NA	120675125	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120677514_120677597_120677676_120677834_120677896_120678205_120678618_120678701_120678808_120678887
ES.7045.27	chr11	+	3901	8	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-5	2	intron_retention	FALSE	canonical	3	997	junction_3	79.8368233796094	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1419	False	NA	-1	True	ATTAAA	-16	NA	120675125	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.28	chr11	+	1798	14	NNC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	320.164768970511	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1421	False	NA	2	True	ATTAAA	-19	NA	120675127	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678771_120678882_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.29	chr11	+	2243	13	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	2	-1	intron_retention	FALSE	canonical	3	682	junction_1	150.655489076531	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1426	False	NA	0	True	ATTAAA	-17	NA	120675132	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.3	chr11	+	1870	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	-40	-3	-7	3	multi-exon	FALSE	canonical	3	682	junction_1	155.049677093711	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTCCTTTCCTTTCTGC	1384	False	NA	5	True	ATTAAA	-22	NA	120675090	120679931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.30	chr11	+	1878	13	NNC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_9	419.625320639999	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1431	False	NA	0	True	ATTAAA	-17	NA	120675137	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678711_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.31	chr11	+	3174	11	NNC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	7	2	intron_retention	FALSE	canonical	0	0	junction_3	404.222228483294	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1431	False	NA	-1	True	ATTAAA	-16	NA	120675137	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675552_120675946_120677293_120677377_120677514_120677602_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.32	chr11	+	1837	14	NNC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	326.459653441959	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1431	False	NA	1	True	ATTAAA	-18	NA	120675137	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678187_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.33	chr11	+	1748	14	NNC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	399.907947987916	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1432	False	NA	0	True	ATTAAA	-17	NA	120675138	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678588_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.35	chr11	+	2201	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-199	-2	11	2	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTCCTTTCCTTTCTG	1435	False	NA	4	True	ATTAAA	-21	NA	120675141	120679930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.36	chr11	+	3495	11	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	14	-1	intron_retention	FALSE	canonical	3	883	junction_10	103.953066332841	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1438	False	NA	0	True	ATTAAA	-17	NA	120675144	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.37	chr11	+	2307	14	NNC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	35	0	intron_retention	FALSE	canonical	1	1	junction_1	314.192117008897	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1459	False	NA	1	True	ATTAAA	-18	NA	120675165	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675685_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.39	chr11	+	2240	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-168	1	42	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1466	False	NA	1	True	ATTAAA	-18	NA	120675172	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.4	chr11	+	1950	13	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	682	junction_1	157.054042361928	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1385	False	NA	2	True	ATTAAA	-19	NA	120675091	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.41	chr11	+	2226	12	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-71	-1	intron_retention	FALSE	canonical	3	238	junction_1	272.32661479181	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1563	False	NA	0	True	ATTAAA	-17	NA	120675269	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.42	chr11	+	2003	12	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-71	2	intron_retention	TRUE	canonical	0	0	junction_11	402.759633421784	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1563	False	NA	-1	True	ATTAAA	-16	NA	120675269	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679287
ES.7045.43	chr11	+	2497	13	NNC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-70	0	intron_retention	FALSE	canonical	0	0	junction_3	382.371864884899	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1564	False	NA	1	True	ATTAAA	-18	NA	120675270	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675552_120675946_120676040_120676525_120677293_120677369_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.44	chr11	+	2631	11	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-60	-1	intron_retention	FALSE	canonical	3	238	junction_1	275.042996638707	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1574	False	NA	0	True	ATTAAA	-17	NA	120675280	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069
ES.7045.46	chr11	+	2138	13	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-59	0	intron_retention	FALSE	canonical	3	238	junction_1	264.016558298065	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1575	False	NA	1	True	ATTAAA	-18	NA	120675281	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679423_120679495
ES.7045.47	chr11	+	2726	5	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-53	2	intron_retention	FALSE	canonical	0	0	junction_2	535.391912527636	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	1581	False	NA	-1	True	ATTAAA	-16	NA	120675287	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676708_120677834_120677896_120678205_120678808_120678887
ES.7045.48	chr11	+	1981	12	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-41	3	intron_retention	FALSE	canonical	0	0	junction_4	403.525332804368	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTCCTTTCCTTTCTGC	1593	False	NA	5	True	ATTAAA	-22	NA	120675299	120679931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.49	chr11	+	2228	13	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	1	-1	intron_retention	FALSE	canonical	3	238	junction_1	264.514597370773	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1635	False	NA	0	True	ATTAAA	-17	NA	120675341	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.5	chr11	+	1964	13	NIC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	682	junction_1	159.819233823717	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1387	False	NA	1	True	ATTAAA	-18	NA	120675093	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120679208_120679287_120679423_120679495
ES.7045.50	chr11	+	2153	12	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	4	0	intron_retention	FALSE	canonical	3	238	junction_1	272.933921709696	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1638	False	NA	1	True	ATTAAA	-18	NA	120675344	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.51	chr11	+	2544	12	NNC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	15	0	intron_retention	FALSE	non_canonical	0	0	junction_2	394.711464864992	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1649	False	NA	1	True	ATTAAA	-18	NA	120675355	120679927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675552_120675946_120676709_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.53	chr11	+	1850	14	NNC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	373.265455931454	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1659	False	NA	0	True	ATTAAA	-17	NA	120675365	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675552_120675946_120676040_120676648_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.54	chr11	+	2123	12	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	28	2	28	-1	intron_retention	FALSE	canonical	3	238	junction_1	271.425286129375	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1662	False	NA	0	True	ATTAAA	-17	NA	120675368	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069
ES.7045.56	chr11	+	1795	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	600	0	600	0	3prime_fragment	FALSE	canonical	3	883	junction_12	108.213780186362	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	2234	False	NA	2	True	ATTAAA	-19	NA	120675940	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.57	chr11	+	1566	10	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	2080	-260	-177	260	3prime_fragment	FALSE	canonical	3	883	junction_9	108.81891175506	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTGTCCAGGCTTCA	80	False	NA	NA	False	AGTAAA	-10	NA	120677420	120680188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7045.58	chr11	+	1815	2	ISM	ENSMUSG00000025156.18	ENSMUST00000144519.2	521	3	204	-1339	204	-1	3prime_fragment	FALSE	canonical	3	1095	junction_1	0	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	461	False	NA	0	True	ATTAAA	-17	NA	120677801	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120677896_120678205
ES.7045.59	chr11	+	1548	3	NIC	ENSMUSG00000025156.18	novel	1843	14	NA	NA	-374	2	intron_retention	FALSE	canonical	3	883	junction_2	59.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCAAGGCTCCTTTCCT	880	False	NA	-1	True	ATTAAA	-16	NA	120678220	120679925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120678618_120678701_120679423_120679495
ES.7045.7	chr11	+	2441	11	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	682	junction_1	153.550773361778	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1388	False	NA	2	True	ATTAAA	-19	NA	120675094	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.8	chr11	+	2327	10	NIC	ENSMUSG00000025156.18	novel	1925	13	NA	NA	1	-1	intron_retention	FALSE	canonical	3	682	junction_1	168.122163108839	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGGCTCCTTTCCTT	1395	False	NA	0	True	ATTAAA	-17	NA	120675101	120679926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677676_120677834_120677896_120678205_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ES.7045.9	chr11	+	1732	14	NNC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	322.793942003382	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1396	False	NA	2	True	ATTAAA	-19	NA	120675102	120679928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120675169_120675946_120676040_120676648_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ES.7046.1	chr11	+	143	1	Intergenic	novelGene_5689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120687623	120687766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120687600_120687800
ES.7047.1	chr11	+	278	1	Intergenic	novelGene_5690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACTAAGAAGAAGGGA	NA	False	NA	NA	False	TATAAA	-12	NA	120690129	120690407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120690100_120690400
ES.7048.1	chr11	+	2689	16	Antisense	novelGene_ENSMUSG00000025153.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTCTAGGCCGCGCCG	3136	False	NA	NA	False	NA	NA	NA	120707130	120714933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120707307_120707448_120707563_120707671_120707873_120707946_120708085_120708297_120708405_120708817_120709004_120709260_120709449_120709565_120710024_120710625_120710761_120710851_120710968_120711067_120711199_120711360_120711561_120711726_120711897_120712901_120713060_120713545_120713681_120714857
ES.7049.1	chr11	-	5006	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-2885	-3	-2885	1	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTCCTCTTGTCATA	NA	False	NA	-3	True	AGTAAA	-20	NA	120677918	120671570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.10	chr11	-	2153	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-165	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.9868405862266	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675198	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672174_120672305_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.101	chr11	-	1841	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	313.807784230709	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687263	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120687044
ES.7049.102	chr11	-	3799	10	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	306.607603007855	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687221	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120683326_120683516_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.103	chr11	-	3258	9	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	2	18	junction_8	296.608749028076	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687223	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120683326_120683516_120685145_120685728_120685838_120686302_120686384_120687044
ES.7049.104	chr11	-	3656	11	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	366.309213643337	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687224	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.105	chr11	-	3662	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	279.073259732137	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687214	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.106	chr11	-	3116	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	346.869399292139	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687214	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685805_120686302_120686550_120686764
ES.7049.107	chr11	-	4202	11	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	278.502782750909	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687223	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.108	chr11	-	3633	10	NIC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	815	junction_7	58.4657755749485	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGCAGAGATCTCTAG	NA	False	NA	-19	True	AATAAA	-14	NA	120687214	120680029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.109	chr11	-	5219	5	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	411.464153967268	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGCAGAGATCTCTA	NA	False	NA	-20	True	AATAAA	-13	NA	120687221	120680030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680707_120682030_120682767_120682852_120685838_120686302
ES.7049.11	chr11	-	2340	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-16	0	intron_retention	TRUE	canonical	0	0	junction_1	80.7886474422957	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675049	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672698_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.110	chr11	-	2051	14	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	329.287665824132	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687214	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683569_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.112	chr11	-	4984	8	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	422	0	intron_retention	FALSE	canonical	0	0	junction_3	321.193628421822	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120686781	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682767_120682852_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.114	chr11	-	4802	5	NIC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	861	junction_3	67.6955500753188	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687223	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680707_120682030_120682177_120682680_120685838_120686302
ES.7049.115	chr11	-	2050	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	255.089145637799	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687214	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.116	chr11	-	2783	12	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	266.379180433823	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687224	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.117	chr11	-	3156	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	254.585392790361	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687223	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.118	chr11	-	2289	14	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	329.300747415673	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687224	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684113_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.119	chr11	-	4168	8	NIC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	851	junction_5	58.0158317590456	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687203	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.12	chr11	-	2085	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-48	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	56.5252336644116	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675081	120671572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673905_120674093_120674197_120674560_120674610_120674718
ES.7049.120	chr11	-	1902	14	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	371.054454607439	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687213	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686384_120686764
ES.7049.121	chr11	-	2520	12	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	340.766054841487	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687223	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.122	chr11	-	1968	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	322.15428697347	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687217	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684113_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.123	chr11	-	2056	14	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	327.869435696445	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687174	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.124	chr11	-	4793	9	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	289.087546212216	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687224	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.126	chr11	-	1892	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	392.868814396668	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687214	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682004_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120686968
ES.7049.127	chr11	-	1805	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.913368110366	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687200	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682752_120682841_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.128	chr11	-	2561	12	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	265.151851082038	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687221	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.129	chr11	-	4797	9	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	300.57296847022	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687215	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.13	chr11	-	1867	6	NIC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	70.9179807947181	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675024	120671572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120672730_120672804_120672891_120673208_120673375_120674093_120674197_120674560_120674610_120674718
ES.7049.130	chr11	-	5650	7	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	345.275614545829	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687214	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682767_120682852_120683326_120683516_120685145_120685728_120685838_120686302
ES.7049.131	chr11	-	1738	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	307.186118215797	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687214	120680031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680218_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.135	chr11	-	2832	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_5	270.087588673666	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTGCAGAGATCTC	NA	False	NA	-22	True	AATAAA	-11	NA	120687221	120680032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.136	chr11	-	9338	55	Fusion	ENSMUSG00000025153.10_ENSMUSG00000025155.16	novel	1863	14	NA	NA	218	-1	multi-exon	TRUE	canonical	0	0	junction_5	200.940904032953	1497	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTGCAGAGATCTC	NA	False	NA	-22	True	AATAAA	-11	NA	120715155	120680032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.137	chr11	-	3490	10	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_5	285.29702953541	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTTGCAGAGATCT	NA	False	NA	-23	True	AATAAA	-10	NA	120687205	120680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.138	chr11	-	3255	12	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_3	339.373827867327	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTTGCAGAGATCT	NA	False	NA	-23	True	AATAAA	-10	NA	120687221	120680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.139	chr11	-	1850	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	321.12940487373	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTTGCAGAGATCT	NA	False	NA	-23	True	AATAAA	-10	NA	120687224	120680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683640_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.14	chr11	-	1920	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.188028715729	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675049	120671572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673905_120674093_120674197_120674560_120674610_120674718
ES.7049.141	chr11	-	3642	12	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_3	340.699402178266	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTTGCAGAGATCT	NA	False	NA	-23	True	AATAAA	-10	NA	120687214	120680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.142	chr11	-	2815	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_5	340.224272437396	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTTGCAGAGATCT	NA	False	NA	-23	True	AATAAA	-10	NA	120687212	120680033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.143	chr11	-	3382	11	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	4	-3	intron_retention	FALSE	canonical	0	0	junction_5	358.388127593535	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCATTTGCAGAGATC	NA	False	NA	-24	True	AATAAA	-9	NA	120687211	120680034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682004_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.144	chr11	-	2283	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_5	376.129927315313	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCATTTGCAGAGAT	NA	False	NA	-25	True	AATAAA	-8	NA	120687214	120680035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684113_120684659_120685145_120685728_120685805_120686302_120686550_120687044
ES.7049.145	chr11	-	5854	7	NIC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	-6	intron_retention	FALSE	canonical	3	851	junction_5	62.0421004014389	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGAAGCATTTGCAGAG	NA	False	NA	-27	True	AATAAA	-6	NA	120687214	120680037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680559_120680668_120682954_120683180_120683326_120683516_120683621_120683853_120685838_120686302
ES.7049.146	chr11	-	5856	6	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-313	2427	intron_retention	FALSE	canonical	3	670	junction_4	16.4146276229466	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCAGATCCTATTACAG	NA	False	NA	NA	False	NA	NA	NA	120700840	120694244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629
ES.7049.147	chr11	-	9649	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	387	14	-65	-14	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAGGTCAAAGTTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	120714986	120696685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.148	chr11	-	9509	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	264	277	-188	-277	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTGTGATTGCCTAAC	NA	False	NA	-1	True	AATAAA	-19	NA	120715109	120696948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.15	chr11	-	2300	7	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-199	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.2090654910973	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGGCTCCTCTTGTCA	NA	False	NA	-5	True	AGTAAA	-18	NA	120675232	120671572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673761_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.150	chr11	-	8836	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	-8	1222	-8	37	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTCAGTCTCTTTCCA	NA	False	NA	-3	True	ATTAAA	-23	NA	120715381	120697893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.152	chr11	-	7840	38	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	3127	32	intron_retention	FALSE	canonical	3	381	junction_37	97.5563218794217	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTCGGTTCAGTCTCT	2257	False	NA	-8	True	ATTAAA	-18	NA	120711479	120697898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357
ES.7049.154	chr11	-	4485	5	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-2410	31	intron_retention	FALSE	canonical	3	595	junction_4	40.5732362524855	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTCGGTTCAGTCTC	8201	False	NA	-9	True	ATTAAA	-17	NA	120702937	120697899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120701940_120702116
ES.7049.157	chr11	-	8559	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-15	30	intron_retention	FALSE	canonical	3	375	junction_38	97.0494026546359	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTTCGGTTCAGTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	120714936	120697900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.158	chr11	-	8524	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-15	30	intron_retention	FALSE	canonical	3	375	junction_38	99.913567644265	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTTCGGTTCAGTCT	NA	False	NA	-10	True	ATTAAA	-16	NA	120714936	120697900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.16	chr11	-	2317	7	NIC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-288	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	56.0518113494609	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGGCTCCTCTTGTC	NA	False	NA	-6	True	AGTAAA	-17	NA	120675321	120671573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.163	chr11	-	8674	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-99	29	intron_retention	FALSE	canonical	3	375	junction_38	99.2643793799283	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120715020	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.164	chr11	-	8606	41	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-11	29	intron_retention	FALSE	canonical	3	375	junction_37	95.7135831530719	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714932	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.165	chr11	-	8525	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	29	intron_retention	FALSE	canonical	3	375	junction_38	97.9215106534898	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714934	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.166	chr11	-	8295	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	126.879245625601	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714934	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120712971_120713542_120713679_120714855
ES.7049.167	chr11	-	4540	21	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	1447	29	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.496550481188	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	8902	False	NA	-11	True	ATTAAA	-15	NA	120704834	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698810_120698896_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479
ES.7049.168	chr11	-	9082	43	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	90	29	combination_of_known_junctions	FALSE	canonical	0	0	junction_42	126.930902784281	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714831	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714051
ES.7049.17	chr11	-	2582	7	NIC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-175	0	intron_retention	FALSE	canonical	3	122	junction_3	21.8403296678416	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGGCTCCTCTTGTC	NA	False	NA	-6	True	AGTAAA	-17	NA	120675208	120671573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.170	chr11	-	5416	24	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-205	29	intron_retention	FALSE	canonical	3	495	junction_20	67.1632044369962	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	7250	False	NA	-11	True	ATTAAA	-15	NA	120706486	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436
ES.7049.171	chr11	-	8516	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-135	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.312104933939	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120715056	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698887_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.172	chr11	-	5965	30	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	1019	29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	137.46911446441	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	149	False	NA	-11	True	ATTAAA	-15	NA	120713587	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706546_120711157_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542
ES.7049.173	chr11	-	8540	41	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-14	29	intron_retention	FALSE	canonical	3	375	junction_37	100.927792876888	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714935	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.174	chr11	-	9018	36	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	6	29	intron_retention	FALSE	canonical	3	375	junction_32	95.2874062818291	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714915	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120703277_120703483_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.176	chr11	-	7847	41	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-9	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	128.56861981059	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGCCTTCGGTTCAGTC	NA	False	NA	-11	True	ATTAAA	-15	NA	120714930	120697901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702750_120703649_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.177	chr11	-	8491	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-143	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	127.315051934088	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120715064	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704250_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.178	chr11	-	8465	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	28	intron_retention	FALSE	canonical	3	375	junction_38	98.8425219244867	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120714934	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.18	chr11	-	1630	6	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	402	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	77.7827744426747	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTGGCTCCTCTTG	NA	False	NA	-8	True	AGTAAA	-15	NA	120674609	120671575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673832_120673905_120674093_120674197_120674560
ES.7049.180	chr11	-	8501	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-128	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_38	125.62833687088	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120715049	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711351_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.181	chr11	-	8455	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	126.657921287787	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120714934	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711974_120712903_120713057_120713542_120713679_120714855
ES.7049.184	chr11	-	5403	24	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-237	28	intron_retention	FALSE	canonical	3	495	junction_21	65.4853913780161	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	7218	False	NA	-12	True	ATTAAA	-14	NA	120706518	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706297_120706436
ES.7049.186	chr11	-	6735	33	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-3026	28	intron_retention	FALSE	canonical	3	397	junction_28	88.2690257023238	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	4429	False	NA	-12	True	ATTAAA	-14	NA	120709307	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120708086_120708298_120708394_120708811_120709002_120709258
ES.7049.187	chr11	-	8461	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-9	28	intron_retention	FALSE	canonical	3	375	junction_38	96.0212275757382	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120714930	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.188	chr11	-	8894	38	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-16	28	intron_retention	FALSE	canonical	3	375	junction_34	88.0134626796157	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGCCTTCGGTTCAGT	NA	False	NA	-12	True	ATTAAA	-14	NA	120714937	120697902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120700079_120700251_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.189	chr11	-	9998	38	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	27	intron_retention	FALSE	canonical	0	0	junction_34	129.891959375088	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	NA	False	NA	-13	True	ATTAAA	-13	NA	120714934	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711225_120711357_120711559_120711724_120711899_120712903_120713057_120713542
ES.7049.195	chr11	-	6983	35	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-3477	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	129.845106685249	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	3978	False	NA	-13	True	ATTAAA	-13	NA	120709758	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704144_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563
ES.7049.198	chr11	-	5833	24	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-672	27	intron_retention	FALSE	canonical	3	426	junction_22	77.6692614725656	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	6783	False	NA	-13	True	ATTAAA	-13	NA	120706953	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706297_120706436_120706617_120706707_120706789_120706865
ES.7049.199	chr11	-	6433	32	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	949	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	133.236811230251	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	79	False	NA	-13	True	ATTAAA	-13	NA	120713657	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120711720_120711899_120712903_120713057_120713542
ES.7049.2	chr11	-	6826	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-4839	0	intron_retention	FALSE	canonical	0	0	junction_1	56.9868405862266	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120679872	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.20	chr11	-	2337	7	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-4	intron_retention	FALSE	canonical	3	13	junction_4	60.962875770605	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTAGTGTGGCTCCTCT	NA	False	NA	-10	True	AGTAAA	-13	NA	120675049	120671577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673905_120674093_120674197_120674560_120674610_120674718
ES.7049.200	chr11	-	4149	21	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	1671	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	142.974569417082	852	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	9126	False	NA	-13	True	ATTAAA	-13	NA	120704610	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699626_120699879_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479
ES.7049.201	chr11	-	7760	43	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	4	27	intron_retention	FALSE	canonical	0	0	junction_1	126.31470300409	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	NA	False	NA	-13	True	ATTAAA	-13	NA	120714917	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698008_120698700_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.202	chr11	-	8173	42	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-11	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	126.813371424	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	NA	False	NA	-13	True	ATTAAA	-13	NA	120714932	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700852_120701290_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.204	chr11	-	4162	20	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-9	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	161.204297352039	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	NA	False	NA	-13	True	ATTAAA	-13	NA	120714930	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700370_120707730_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.206	chr11	-	5140	25	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	37	27	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	137.666868442144	853	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGCCTTCGGTTCAG	NA	False	NA	-13	True	ATTAAA	-13	NA	120714884	120697903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120705992_120713582_120713679_120714855
ES.7049.208	chr11	-	8461	42	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	26	intron_retention	FALSE	canonical	3	375	junction_38	96.5980097661401	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCACTGCCTTCGGTTCA	NA	False	NA	-14	True	ATTAAA	-12	NA	120714934	120697904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.209	chr11	-	8586	41	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	4	26	intron_retention	FALSE	canonical	3	375	junction_37	97.1169108600557	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCACTGCCTTCGGTTCA	NA	False	NA	-14	True	ATTAAA	-12	NA	120714917	120697904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.21	chr11	-	1997	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	58.9309523328543	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTAGTGTGGCTCCTCT	NA	False	NA	-10	True	AGTAAA	-13	NA	120675044	120671577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672602_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.211	chr11	-	2660	3	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-311	26	intron_retention	FALSE	canonical	3	704	junction_1	6	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCACTGCCTTCGGTTCA	NA	False	NA	-14	True	ATTAAA	-12	NA	120700838	120697904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120699766_120699850_120700441_120700629
ES.7049.214	chr11	-	8550	42	NNC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-93	26	intron_retention	FALSE	canonical	0	0	junction_2	126.15383940141	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCACTGCCTTCGGTTCA	NA	False	NA	-14	True	ATTAAA	-12	NA	120715014	120697904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120698818_120698900_120699168_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.215	chr11	-	8540	41	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-13	25	intron_retention	FALSE	canonical	3	375	junction_37	100.362589519203	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGCACTGCCTTCGGTTC	NA	False	NA	-15	True	ATTAAA	-11	NA	120714934	120697905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.218	chr11	-	2200	5	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-144	24	intron_retention	FALSE	canonical	3	680	junction_2	13.0958008537088	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGCACTGCCTTCGGTT	NA	False	NA	-16	True	ATTAAA	-10	NA	120700671	120697906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120700441_120700629
ES.7049.219	chr11	-	8043	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	444	1563	-8	138	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTTTTGTCTTGTCCT	NA	False	NA	NA	False	AATACA	-17	NA	120714929	120698234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.22	chr11	-	2480	6	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-23	-4	intron_retention	FALSE	canonical	0	0	junction_1	71.3161973187017	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTAGTGTGGCTCCTCT	NA	False	NA	-10	True	AGTAAA	-13	NA	120675056	120671577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120674197_120674560_120674610_120674718
ES.7049.220	chr11	-	8383	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	1	1666	1	35	multi-exon	FALSE	canonical	3	375	junction_39	98.8392726301593	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGGGGTGACTCATTC	NA	False	NA	5	True	ATTAAA	-31	NA	120715372	120698337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ES.7049.226	chr11	-	5424	27	NIC	ENSMUSG00000025153.10	novel	10050	43	NA	NA	-934	19	intron_retention	FALSE	canonical	3	441	junction_26	76.1222156533579	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGCTGGGAAAGACCCC	6521	False	NA	-11	True	ATTAAA	-15	NA	120707215	120698353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706789_120706865_120707058_120707130
ES.7049.23	chr11	-	1986	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.6612321688678	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTAGTGTGGCTCCTCT	NA	False	NA	-10	True	AGTAAA	-13	NA	120675049	120671577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673761_120673905_120674093_120674197_120674560_120674610_120674718
ES.7049.24	chr11	-	2335	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-10	-5	intron_retention	TRUE	non_canonical	0	0	junction_1	65.2090654910973	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCTAGTGTGGCTCCTC	NA	False	NA	-11	True	AGTAAA	-12	NA	120675021	120671578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672174_120672308_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.25	chr11	-	1847	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	-164	435	-164	-435	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTACCCCCGATGGTG	NA	False	NA	NA	False	GATAAA	-10	NA	120675197	120672008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.26	chr11	-	3005	15	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	1768	intron_retention	FALSE	canonical	0	0	junction_6	315.839115593328	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGCACTTGGCTGCTT	NA	False	NA	NA	False	NA	NA	NA	120687214	120678258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.27	chr11	-	2629	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	1666	intron_retention	FALSE	non_canonical	0	0	junction_6	307.514136061338	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCACGAGCGCGCGTTCA	NA	False	NA	22	True	CATAAA	-44	NA	120687223	120678360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682858_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.28	chr11	-	2915	15	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	1666	intron_retention	FALSE	canonical	0	0	junction_6	363.921470560194	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCACGAGCGCGCGTTCA	NA	False	NA	22	True	CATAAA	-44	NA	120687215	120678360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679503_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.29	chr11	-	3162	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	1642	intron_retention	FALSE	canonical	0	0	junction_1	311.322753975448	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACGAGAGGTTAAAGCCC	NA	False	NA	-2	True	CATAAA	-20	NA	120687224	120678384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679985_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.3	chr11	-	1882	8	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	73.2738781864983	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675018	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672122_120672255_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.30	chr11	-	3748	14	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	1	1642	intron_retention	FALSE	non_canonical	0	0	junction_5	259.578401924278	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACGAGAGGTTAAAGCCC	NA	False	NA	-2	True	CATAAA	-20	NA	120687214	120678384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682857_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.31	chr11	-	2238	15	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	2	1641	intron_retention	FALSE	canonical	0	0	junction_6	319.16994545482	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687213	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120678793_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.32	chr11	-	2669	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	1641	intron_retention	FALSE	canonical	0	0	junction_6	309.658666592618	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687214	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679503_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.33	chr11	-	3778	12	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	251	1641	intron_retention	FALSE	non_canonical	0	0	junction_6	341.140697083493	649	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120686952	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682773_120682861_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.34	chr11	-	2858	15	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	9	1641	intron_retention	FALSE	canonical	0	0	junction_6	315.839115593328	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687194	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.35	chr11	-	3284	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	1641	intron_retention	FALSE	canonical	0	0	junction_5	377.135355527546	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687221	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120683326_120683516_120683569_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.36	chr11	-	2949	15	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	1641	intron_retention	FALSE	canonical	0	0	junction_6	317.894323668115	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687214	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679503_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.37	chr11	-	2613	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	1641	intron_retention	FALSE	canonical	0	0	junction_6	307.514136061338	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACGAGAGGTTAAAGCC	NA	False	NA	-3	True	CATAAA	-19	NA	120687229	120678385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.38	chr11	-	3815	6	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	-2284	1639	intron_retention	FALSE	canonical	0	0	junction_4	453.928364392445	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGACGAGAGGTTAAAG	NA	False	NA	-5	True	CATAAA	-17	NA	120683557	120678387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120682767_120682852_120683326_120683516
ES.7049.39	chr11	-	1957	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	1639	intron_retention	FALSE	canonical	0	0	junction_6	310.988942647451	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGACGAGAGGTTAAAG	NA	False	NA	-5	True	CATAAA	-17	NA	120687214	120678387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120678793_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.4	chr11	-	2656	6	FSM	ENSMUSG00000025158.8	ENSMUST00000123273.2	2467	6	-189	0	-167	0	multi-exon	FALSE	canonical	3	152	junction_3	12.2081939696255	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675200	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.40	chr11	-	3489	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-7	1639	intron_retention	FALSE	canonical	0	0	junction_5	245.913368110366	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGACGAGAGGTTAAAG	NA	False	NA	-5	True	CATAAA	-17	NA	120687236	120678387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.42	chr11	-	3688	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	1639	intron_retention	FALSE	canonical	0	0	junction_5	328.041237124905	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGACGAGAGGTTAAAG	NA	False	NA	-5	True	CATAAA	-17	NA	120687215	120678387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.43	chr11	-	4938	12	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	253	1639	intron_retention	FALSE	canonical	0	0	junction_5	395.851002940406	649	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGACGAGAGGTTAAAG	NA	False	NA	-5	True	CATAAA	-17	NA	120686950	120678387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120679503_120680302_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.45	chr11	-	6590	5	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	9	intron_retention	FALSE	canonical	0	0	junction_2	403.878075661455	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTAGTGATGCCTATGG	NA	False	NA	-7	True	AATAAA	-26	NA	120687214	120680017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120682767_120682852_120683326_120683516_120683621_120683853
ES.7049.46	chr11	-	1979	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-127	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	245.913368110366	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTAGTGATGCCTATGG	NA	False	NA	-7	True	AATAAA	-26	NA	120687356	120680017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.47	chr11	-	2131	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-1	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	259.578401924278	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTAGTGATGCCTAT	NA	False	NA	-9	True	AATAAA	-24	NA	120687230	120680019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.48	chr11	-	3879	10	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	0	7	intron_retention	FALSE	canonical	0	0	junction_4	285.688641706316	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCTAGTGATGCCTAT	NA	False	NA	-9	True	AATAAA	-24	NA	120687215	120680019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.5	chr11	-	2246	8	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-181	0	intron_retention	FALSE	canonical	0	0	junction_1	78.5628566752737	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675214	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718_120674796_120675086
ES.7049.50	chr11	-	2416	12	NIC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-5	1	intron_retention	FALSE	canonical	3	416	junction_11	144.706199927718	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAGATCTCTAGTGAT	NA	False	NA	-15	True	AATAAA	-18	NA	120687208	120680025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.51	chr11	-	3545	11	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	2	0	intron_retention	FALSE	canonical	1	8	junction_5	346.265288471137	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687213	120680026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682770_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.52	chr11	-	4379	11	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	270.813219765949	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687223	120680026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.54	chr11	-	5110	9	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	300.750701370753	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687223	120680026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682767_120682852_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.55	chr11	-	3968	11	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	270.731970775525	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687214	120680026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120685145_120685728_120685838_120686302
ES.7049.56	chr11	-	1906	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	307.92752547758	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687217	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ES.7049.57	chr11	-	4628	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-2594	0	intron_retention	TRUE	non_canonical	0	0	junction_5	320.059646807892	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120689823	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120688718_120689020
ES.7049.58	chr11	-	1933	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	319.526813609413	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687206	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686384_120686764
ES.7049.59	chr11	-	2040	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	360.140570845928	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687174	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686757
ES.7049.6	chr11	-	2299	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-187	0	intron_retention	TRUE	non_canonical	0	0	junction_6	80.7886474422957	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675220	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672698_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718_120674818_120675162
ES.7049.60	chr11	-	3661	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	258.210273719977	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687229	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.61	chr11	-	3358	11	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	359.522308070028	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687213	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.62	chr11	-	3678	9	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	8	junction_5	299.862781118298	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682947_120683180_120683326_120683516_120685145_120685728_120685838_120686302
ES.7049.63	chr11	-	2054	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	340.054764788784	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687212	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685728_120685838_120686302_120686550_120686764
ES.7049.64	chr11	-	2316	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	332.715051591532	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687215	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683930_120684659_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.65	chr11	-	2508	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	331.063049970176	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687224	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684113_120684659_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.66	chr11	-	3053	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	259.15737584438	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687222	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.67	chr11	-	2698	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	406.050015865799	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684113_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764_120686887_120686968
ES.7049.69	chr11	-	1819	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	366.749467072051	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682004_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.7	chr11	-	6148	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-3575	0	intron_retention	FALSE	canonical	0	0	junction_1	81.3608218575337	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120678608	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674414_120674560_120674610_120674718
ES.7049.71	chr11	-	2277	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	328.152181413847	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682756_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.72	chr11	-	2289	13	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	381.961849098397	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687224	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682857_120682947_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.73	chr11	-	4435	8	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_5	322.10234144965	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687239	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120685838_120686302
ES.7049.74	chr11	-	3340	10	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	292.901744786141	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120683326_120683516_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.75	chr11	-	2878	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	267.124696173501	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687221	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.76	chr11	-	2124	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	305.579941409308	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687224	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686757
ES.7049.77	chr11	-	2558	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	255.933408765292	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687222	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.78	chr11	-	3148	11	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	271.028208863948	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687215	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120685145_120685728_120685838_120686302
ES.7049.8	chr11	-	8732	21	Fusion	ENSMUSG00000025158.8_ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	369.215042353369	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120687224	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.80	chr11	-	2148	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	255.785215344611	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.81	chr11	-	4760	10	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	427.546344322121	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682612_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.82	chr11	-	3350	12	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	329.730819340778	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686757
ES.7049.83	chr11	-	2081	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	355.251673436298	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120686757
ES.7049.85	chr11	-	2331	13	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	254.906995566793	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.86	chr11	-	1795	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	367.790572643514	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ES.7049.87	chr11	-	1843	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	363.000872087237	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ES.7049.88	chr11	-	2288	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	328.152181413847	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687214	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.89	chr11	-	2108	14	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	259.578401924278	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687215	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682778_120682863_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.9	chr11	-	3088	7	NNC	ENSMUSG00000025158.8	novel	2467	6	NA	NA	-732	0	intron_retention	FALSE	canonical	0	0	junction_1	65.2090654910973	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675765	120671571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120672035_120672167_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
ES.7049.90	chr11	-	4717	6	NIC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	350.775711815969	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687221	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120682177_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.91	chr11	-	3375	11	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_5	271.772349586929	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687223	120680027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685145_120685728_120685838_120686302
ES.7049.92	chr11	-	3430	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	268.494090044621	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687214	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.93	chr11	-	4371	11	NNC	ENSMUSG00000025155.16	novel	1762	14	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_4	357.451311369814	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687224	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.94	chr11	-	4453	9	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_4	302.066631722208	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687214	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120685838_120686302
ES.7049.95	chr11	-	4472	10	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_3	371.583398744107	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687215	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.96	chr11	-	3356	10	NIC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	815	junction_7	58.0995314572807	646	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687213	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ES.7049.98	chr11	-	3395	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_4	336.640541478097	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687213	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682767_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
ES.7049.99	chr11	-	3580	10	NNC	ENSMUSG00000025155.16	novel	3062	12	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_5	375.993925614185	646	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCAGAGATCTCTAGT	NA	False	NA	-18	True	AATAAA	-15	NA	120687203	120680028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682767_120682852_120682947_120683180_120683326_120683516_120685145_120685728_120685838_120686302
ES.705.1	chr1	-	178	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAATAATATTC	NA	False	NA	NA	False	NA	NA	NA	72286824	72286646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72286600_72286800
ES.7050.1	chr11	+	2216	1	Intergenic	novelGene_5691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAACAACAA	170	False	NA	NA	False	NA	NA	NA	120731042	120733258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120731000_120733300
ES.7050.2	chr11	+	3177	2	Antisense	novelGene_ENSMUSG00000048445.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	170	False	NA	NA	False	NA	NA	NA	120731042	120735918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120733134_120734832
ES.7050.3	chr11	+	4874	1	Intergenic	novelGene_5692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	172	False	NA	NA	False	NA	NA	NA	120731044	120735918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120731000_120735900
ES.7050.4	chr11	+	2215	2	Antisense	novelGene_ENSMUSG00000048445.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAGAAAGAAA	172	False	NA	NA	False	NA	NA	NA	120731044	120735918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120733126_120735784
ES.7051.1	chr11	+	178	1	Intergenic	novelGene_5696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAAAATAACT	NA	False	NA	NA	False	NA	NA	NA	120783842	120784020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120783800_120784000
ES.7052.1	chr11	+	177	2	Antisense	novelGene_ENSMUSG00000048445.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	3127	False	NA	NA	False	NA	NA	NA	120787661	120817807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120787678_120817646
ES.7052.2	chr11	+	176	1	Intergenic	novelGene_5697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAAACA	3127	False	NA	NA	False	NA	NA	NA	120787661	120787837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120787700_120787800
ES.7052.3	chr11	+	179	1	Intergenic	novelGene_5698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	6209	False	NA	NA	False	NA	NA	NA	120790743	120790922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120790700_120790900
ES.7052.4	chr11	+	205	1	Intergenic	novelGene_5699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGATTGATAATTAATT	NA	False	NA	NA	False	NA	NA	NA	120817629	120817834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120817600_120817800
ES.7053.1	chr11	+	216	1	Intergenic	novelGene_5700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTTTAAGACAGAGTC	NA	False	NA	NA	False	AAAACA	-18	NA	120822857	120823073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120822900_120823100
ES.7054.1	chr11	-	3436	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	-35	2	-35	-2	multi-exon	FALSE	canonical	2	6	junction_6	6.51399253648882	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGTCTTGTCCTA	1436	False	NA	0	True	ATTAAA	-26	NA	120823733	120717356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
ES.7054.10	chr11	-	3413	14	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	3	51246	3	-3983	5prime_fragment	FALSE	canonical	2	6	junction_1	7.23894791139606	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGTACCCTTGTTC	1474	False	NA	NA	False	AGTAAA	-16	NA	120823695	120768600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
ES.7054.11	chr11	-	2889	3	ISM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	47	90689	47	-43426	5prime_fragment	FALSE	canonical	3	22	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATAAGATGCCTTCCTT	1518	False	NA	NA	False	NA	NA	NA	120823651	120808043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120810408_120812345_120812761_120823541
ES.7054.2	chr11	-	3044	18	NNC	ENSMUSG00000048445.7	novel	3403	19	NA	NA	-17672	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.22310923412689	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTCTGTCTTGTCCT	1978	False	NA	-1	True	ATTAAA	-25	NA	120794409	120717357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120717751_120751226_120751453_120751963_120752096_120754871_120754981_120757380_120757503_120761873_120762089_120762203_120762347_120764411_120764626_120769703_120769875_120772640_120772742_120772838_120772882_120776058_120776389_120776675_120776890_120785424_120785560_120788634_120788794_120792700_120792902_120794141_120794217_120794348
ES.7054.3	chr11	-	987	4	NNC	ENSMUSG00000048445.7	novel	1164	6	NA	NA	10643	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTGTGAAGTTGTC	NA	False	NA	-12	True	ATTAAA	-14	NA	120753854	120717368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120717751_120751226_120751453_120751963_120752096_120753607
ES.7054.4	chr11	-	4934	1	Intergenic	novelGene_5693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCATTAATAATAATAATAA	4460	False	NA	NA	False	NA	NA	NA	120743541	120738607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120738600_120743500
ES.7054.5	chr11	-	3569	1	Intergenic	novelGene_5694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTTACAGATTTCTCC	4449	False	NA	NA	False	NA	NA	NA	120743552	120739983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120740000_120743600
ES.7054.6	chr11	-	4522	3	Genic_Genomic	ENSMUSG00000048445.7	novel	3403	19	NA	NA	5744	10481	multi-exon	TRUE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAAAAACTCTGTT	NA	False	NA	NA	False	NA	NA	NA	120758753	120754136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120754704_120754759_120757972_120758010
ES.7054.7	chr11	-	4523	2	Genic_Genomic	ENSMUSG00000048445.7	novel	3403	19	NA	NA	5744	10443	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120758753	120754174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_-_120754704_120754759
ES.7054.8	chr11	-	214	1	Intergenic	novelGene_5695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGTTAAATAACTCGTG	NA	False	NA	NA	False	AATAAA	-2	NA	120755370	120755156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120755200_120755400
ES.7054.9	chr11	-	6269	18	NNC	ENSMUSG00000048445.7	novel	3403	19	NA	NA	49	7623	intron_retention	FALSE	canonical	0	0	junction_2	10.064154074329	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGACTCGGTAATTAA	1520	False	NA	NA	False	AATAAA	-17	NA	120823649	120756994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120757503_120761873_120762089_120764411_120764626_120769703_120772742_120772838_120772882_120773502_120773585_120776058_120776389_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
ES.7055.1	chr11	+	190	1	Intergenic	novelGene_5701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAGATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	120833076	120833266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_120833100_120833300
ES.7056.1	chr11	+	2439	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	-196	2092	-168	1	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTGGCCCTCATTAGC	NA	False	NA	23	True	AAAAAG	-1	NA	120839710	120849602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.12	chr11	+	2571	7	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	29	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	158.281131745596	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120839935	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120839977_120840126_120840490_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.13	chr11	+	2344	7	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	29	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	160.619287619998	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCCTCATTAGCTC	NA	False	NA	25	True	AAAAAG	-3	NA	120839935	120849604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848406_120848535_120848680
ES.7056.14	chr11	+	2925	7	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	160.587895627978	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839935	120849601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120839977_120840126_120840839_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.15	chr11	+	2415	7	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.051492800698	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839935	120849601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120839977_120843954_120844157_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.17	chr11	+	2594	6	NIC	ENSMUSG00000025161.17	novel	677	2	NA	NA	-64	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	136.383870014016	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGCCCTCATTAGCT	NA	False	NA	24	True	AAAAAG	-2	NA	120841899	120849603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120842320_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.18	chr11	+	4145	6	NNC	ENSMUSG00000025161.17	novel	677	2	NA	NA	9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.945786452505	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120841972	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120843951_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.19	chr11	+	4329	6	NNC	ENSMUSG00000025161.17	novel	677	2	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.945786452505	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120841994	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120844157_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.20	chr11	+	2075	4	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	6156	230	-3	-5	3prime_fragment	FALSE	canonical	3	287	junction_3	28.7170100579198	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120846048	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.21	chr11	+	1833	3	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	6727	230	568	-5	3prime_fragment	FALSE	canonical	3	287	junction_2	20.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120846619	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_120846769_120847180_120847949_120848680
ES.7056.22	chr11	+	915	3	NNC	ENSMUSG00000025161.17	novel	2386	5	NA	NA	1345	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120847396	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120847949_120848680_120849020_120849572
ES.7056.3	chr11	+	2192	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	-31	225	-17	0	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839861	120849601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.4	chr11	+	2137	6	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.297466849506	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120839865	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120839977_120844999_120845095_120846192_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.5	chr11	+	2597	4	NIC	ENSMUSG00000025161.17	novel	2386	5	NA	NA	-10	0	intron_retention	FALSE	canonical	3	33	junction_1	139.200893994575	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839868	120849601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120839977_120846051_120846296_120846624_120847949_120848680
ES.7056.6	chr11	+	4348	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	-13	0	1	0	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGATGTAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	120839893	120851694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.7	chr11	+	2944	5	FSM	ENSMUSG00000025161.17	ENSMUST00000154187.8	974	5	53	-2023	25	-5	multi-exon	FALSE	canonical	3	280	junction_1	35.9096087419509	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTGGTTCTGGCCCTC	NA	False	NA	17	True	NA	NA	NA	120839931	120849596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180
ES.7056.8	chr11	+	3075	6	NNC	ENSMUSG00000025161.17	novel	4335	6	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	137.945786452505	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839935	120849601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120840839_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ES.7056.9	chr11	+	1967	4	NIC	ENSMUSG00000025161.17	novel	2386	5	NA	NA	29	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	128.224629286091	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTGGTTCTGGCCC	NA	False	NA	15	True	NA	NA	NA	120839935	120849594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_120839977_120846051_120846296_120847180_120847949_120848680
ES.7057.1	chr11	+	5050	1	Antisense	novelGene_ENSMUSG00000025162.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGTAACCATAGCACAT	NA	False	NA	NA	False	NA	NA	NA	120867397	120872447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_120867400_120872400
ES.7058.1	chr11	-	3535	1	Antisense	novelGene_ENSMUSG00000025161.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8306	False	NA	NA	False	NA	NA	NA	120847935	120844400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_120844400_120847900
ES.7059.1	chr11	-	2636	9	FSM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	6	-819	6	819	multi-exon	FALSE	canonical	3	23	junction_1	191.835052844885	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCTTCCCTGCTCCCTG	782	False	NA	NA	False	AATAAA	-22	NA	120882150	120848996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.10	chr11	-	4831	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	0	intron_retention	FALSE	canonical	2	3	junction_3	212.104325505066	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120861891_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.11	chr11	-	8645	7	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	486	junction_4	60.7142670401465	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.12	chr11	-	3657	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.190504228067	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	786	False	NA	-11	True	AATAAA	-22	NA	120882146	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860013_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.13	chr11	-	4013	8	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	8	0	intron_retention	TRUE	canonical	3	10	junction_4	206.757079191786	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	1022	False	NA	-11	True	AATAAA	-22	NA	120881910	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.14	chr11	-	4319	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	17	0	intron_retention	FALSE	canonical	3	400	junction_1	84.7546278310247	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	793	False	NA	-11	True	AATAAA	-22	NA	120882139	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.15	chr11	-	6960	9	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	5	junction_2	221.429411720756	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	782	False	NA	-11	True	AATAAA	-22	NA	120882150	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120859205_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.16	chr11	-	3426	10	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	265.838343154929	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	1063	False	NA	-12	True	AATAAA	-21	NA	120881869	120852575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859088_120859205_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.17	chr11	-	3730	10	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	233.552278230521	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	782	False	NA	-12	True	AATAAA	-21	NA	120882150	120852575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120871491_120871554_120874058_120874170_120881760
ES.7059.18	chr11	-	3313	9	NIC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	232.202195026231	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	1051	False	NA	-12	True	AATAAA	-21	NA	120881881	120852575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120874058_120874170_120881760
ES.7059.19	chr11	-	3412	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	202.342183874248	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	1031	False	NA	-12	True	AATAAA	-21	NA	120881901	120852575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864653_120864796_120874058_120874170_120881760
ES.7059.2	chr11	-	1794	10	NNC	ENSMUSG00000025162.19	novel	1823	9	NA	NA	16	809	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	241.193790227784	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGACCTCTTCC	792	False	NA	NA	False	AATAAA	-12	NA	120882140	120849006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120849147_120849968_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.20	chr11	-	3654	10	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	226.32032363199	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCTCCCCTTTGTGTG	782	False	NA	-12	True	AATAAA	-21	NA	120882150	120852575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.22	chr11	-	3439	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	213.641507852643	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCCCTCCCCTTTGTG	780	False	NA	-14	True	AATAAA	-19	NA	120882152	120852577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120864646_120864796_120874058_120874170_120881760
ES.7059.23	chr11	-	7334	8	NIC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	9	-5	intron_retention	FALSE	canonical	3	176	junction_1	152.800924241248	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCCCTCCCCTTTG	785	False	NA	-16	True	AATAAA	-17	NA	120882147	120852579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120855773_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864796_120874058_120874170_120881760
ES.7059.24	chr11	-	3534	10	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-13	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	233.552278230521	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCCCTCCCCTTTG	1001	False	NA	-16	True	AATAAA	-17	NA	120881931	120852579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120871491_120871581_120874058_120874170_120881760
ES.7059.25	chr11	-	4465	8	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	16	-5	intron_retention	FALSE	canonical	3	10	junction_4	205.432545163236	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCCCTCCCCTTTG	792	False	NA	-16	True	AATAAA	-17	NA	120882140	120852579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.26	chr11	-	8413	7	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	-5	intron_retention	FALSE	canonical	3	486	junction_4	61.2535713244542	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTCCCTCCCCTTTG	782	False	NA	-16	True	AATAAA	-17	NA	120882150	120852579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120858961_120859848_120860021_120862392_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.27	chr11	-	3025	7	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-13	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	217.022848259502	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	1042	False	NA	-17	True	AATAAA	-16	NA	120881890	120852580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120874058_120874170_120881760
ES.7059.29	chr11	-	3607	10	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	72	-6	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_9	221.106811795164	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	848	False	NA	-17	True	AATAAA	-16	NA	120882084	120852580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881813
ES.7059.3	chr11	-	2123	9	FSM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	226	-526	-12	526	multi-exon	FALSE	canonical	3	23	junction_1	191.835052844885	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGGTTTCTAGGTCC	1002	False	NA	NA	False	ATTAAA	-16	NA	120881930	120849289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.30	chr11	-	4006	10	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	10	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	232.949684600678	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	786	False	NA	-17	True	AATAAA	-16	NA	120882146	120852580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120871491_120871839_120874058_120874170_120881760
ES.7059.31	chr11	-	3430	9	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	241.209161051151	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	772	False	NA	-17	True	AATAAA	-16	NA	120882160	120852580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120864646_120864796_120874058_120874170_120881760
ES.7059.34	chr11	-	3072	8	NIC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	238.292565848739	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTTCCCTCCCCTT	1057	False	NA	-18	True	AATAAA	-15	NA	120881875	120852581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120874058_120874170_120881760
ES.7059.35	chr11	-	4086	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	252.318251420701	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTTCCCTCCCCTT	782	False	NA	-18	True	AATAAA	-15	NA	120882150	120852581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120861891_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.36	chr11	-	3338	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	198.518536603008	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTTCCCTCCCCTT	1013	False	NA	-18	True	AATAAA	-15	NA	120881919	120852581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858913_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.38	chr11	-	3581	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	196.81272824693	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTTCCCTCCCCTT	786	False	NA	-18	True	AATAAA	-15	NA	120882146	120852581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.4	chr11	-	3716	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	-33	-8	-33	8	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGGTCTTTCTT	743	False	NA	-3	True	AATAAA	-30	NA	120882189	120852566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.40	chr11	-	2108	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	-25	1592	-25	307	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGGCTTGGAGCTTCTA	751	False	NA	60	True	NA	NA	NA	120882181	120854166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.41	chr11	-	2145	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-237	1592	1	307	multi-exon	FALSE	canonical	3	176	junction_1	174.428237039028	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGGCTTGGAGCTTCTA	777	False	NA	60	True	NA	NA	NA	120882155	120854166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.42	chr11	-	2725	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	4	292	intron_retention	FALSE	canonical	3	400	junction_1	84.7546278310247	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTAAGACACGCT	780	False	NA	45	True	NA	NA	NA	120882152	120854181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.43	chr11	-	1777	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	236	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	213.641507852643	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTCTTTCTTGTCTG	782	False	NA	-11	True	AAGAAA	-11	NA	120882150	120854237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120864646_120864796_120874058_120874170_120881760
ES.7059.44	chr11	-	2716	9	NIC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	10	226	intron_retention	FALSE	canonical	3	176	junction_1	181.771792022305	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	786	False	NA	17	True	AAGAAA	-1	NA	120882146	120854247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.45	chr11	-	6084	8	ISM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	6	4432	6	226	5prime_fragment	FALSE	canonical	3	486	junction_5	56.719503178504	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	782	False	NA	17	True	AAGAAA	-1	NA	120882150	120854247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.46	chr11	-	7372	6	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	226	intron_retention	FALSE	canonical	3	5	junction_1	242.630253678308	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	782	False	NA	17	True	AAGAAA	-1	NA	120882150	120854247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120859205_120859848_120860021_120862392_120862542_120863202_120864796_120874058_120874170_120881760
ES.7059.47	chr11	-	4959	9	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	10	223	intron_retention	FALSE	canonical	3	10	junction_5	221.51128639417	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTCTTTTTATTGTT	786	False	NA	14	True	NA	NA	NA	120882146	120854250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.48	chr11	-	7858	6	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	17	223	intron_retention	FALSE	canonical	2	3	junction_2	247.898043558234	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTCTTTTTATTGTT	793	False	NA	14	True	NA	NA	NA	120882139	120854250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120858961_120859848_120860021_120861891_120863374_120863791_120864796_120874058_120874170_120881760
ES.7059.49	chr11	-	2225	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	14	219	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	197.129359495231	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATCTGTCTTTTTAT	790	False	NA	10	True	NA	NA	NA	120882142	120854254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120859205_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.5	chr11	-	3556	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-24	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	205.667454986968	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTGTGTGGTCTTTC	752	False	NA	-5	True	AATAAA	-28	NA	120882180	120852568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120874058_120874170_120881760
ES.7059.50	chr11	-	4828	9	NIC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	-24	219	intron_retention	FALSE	canonical	3	176	junction_1	143.890963493195	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATCTGTCTTTTTAT	990	False	NA	10	True	NA	NA	NA	120881942	120854254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120855773_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.51	chr11	-	1713	10	NNC	ENSMUSG00000025162.19	novel	3500	10	NA	NA	-11	219	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	226.32032363199	607	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATCTGTCTTTTTAT	1044	False	NA	10	True	NA	NA	NA	120881888	120854254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.52	chr11	-	2027	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-8	219	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	191.812245438085	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATCTGTCTTTTTAT	768	False	NA	10	True	NA	NA	NA	120882164	120854254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864820_120874058_120874170_120881760
ES.7059.53	chr11	-	5664	6	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	6	216	intron_retention	FALSE	canonical	3	400	junction_1	97.0966528774293	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGAAATCTGTCTTTT	782	False	NA	7	True	NA	NA	NA	120882150	120854257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120862542_120863202_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.54	chr11	-	1631	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-13	214	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	198.518536603008	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAAAGAAATCTGTCTT	1042	False	NA	5	True	NA	NA	NA	120881890	120854259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858913_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.6	chr11	-	3769	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	-263	-6	-25	6	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTTGTGTGGTCTTTC	751	False	NA	-5	True	AATAAA	-28	NA	120882181	120852568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.7	chr11	-	7788	8	ISM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	-24	2758	-24	1	5prime_fragment	FALSE	canonical	3	486	junction_5	56.719503178504	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCCCTTTGTGTGGT	752	False	NA	-10	True	AATAAA	-23	NA	120882180	120852573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.8	chr11	-	6483	7	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-12	1	intron_retention	FALSE	canonical	3	400	junction_1	90.2134813773541	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCCCTTTGTGTGGT	1002	False	NA	-10	True	AATAAA	-23	NA	120881930	120852573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_120854733_120858820_120858961_120859848_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ES.7059.9	chr11	-	3432	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	191.812245438085	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	1043	False	NA	-11	True	AATAAA	-22	NA	120881889	120852574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864820_120874058_120874170_120881760
ES.706.1	chr1	+	171	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCTTA	7450	False	NA	NA	False	NA	NA	NA	72291843	72292014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72291800_72292000
ES.7060.1	chr11	+	1957	5	NNC	ENSMUSG00000086835.3	novel	773	3	NA	NA	5922	1059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1.4790199457749	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTATGGCTTTATAGAATC	NA	False	NA	NA	False	NA	NA	NA	120926149	120944242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120926401_120928520_120928689_120941143_120941220_120942742_120942830_120942867
ES.7060.2	chr11	+	1832	3	NNC	ENSMUSG00000086835.3	novel	773	3	NA	NA	6007	1057	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGTATGGCTTTATAGAA	NA	False	NA	NA	False	NA	NA	NA	120926234	120944240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_120926401_120928520_120928689_120942742
ES.7061.1	chr11	-	1010	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	-32	4	-32	-4	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCACTTGTTTTTGTTG	7864	False	NA	NA	False	AATAAA	-18	NA	120930276	120927576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
ES.7062.1	chr11	-	159	1	Intergenic	novelGene_5702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	120942457	120942298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120942300_120942500
ES.7063.1	chr11	-	180	1	Intergenic	novelGene_5703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATCT	NA	False	NA	NA	False	NA	NA	NA	120951684	120951504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_120951500_120951700
ES.7064.1	chr11	-	2093	1	NIC	ENSMUSG00000039337.4	novel	2046	3	NA	NA	368	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTTGCAGTCTCCTC	NA	False	NA	-2	True	AATAAA	-17	NA	121009135	121007042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121007000_121009100
ES.7064.2	chr11	-	1705	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	339	2	339	-2	multi-exon	FALSE	canonical	3	61	junction_1	13.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTTGCAGTCTCCTC	NA	False	NA	-2	True	AATAAA	-17	NA	121009164	121007042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121008523_121008652_121008727_121009013
ES.7065.1	chr11	+	215	1	Intergenic	novelGene_5704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTAATAGCTGCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	121031507	121031722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121031500_121031700
ES.7066.1	chr11	+	1783	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	-39	1	-39	-1	multi-exon	FALSE	canonical	3	732	junction_1	1	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTATGTGTATGGTT	NA	False	NA	25	True	AATAAA	-19	NA	121036929	121039144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121037049_121037353_121037428_121037554
ES.7066.2	chr11	+	2165	1	NIC	ENSMUSG00000039329.9	novel	1745	3	NA	NA	-3	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTATGTGTATGGTT	NA	False	NA	25	True	AATAAA	-19	NA	121036979	121039144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121037000_121039100
ES.7066.4	chr11	+	1855	2	FSM	ENSMUSG00000039329.9	ENSMUST00000155694.2	406	2	2	-1451	2	-1	multi-exon	FALSE	canonical	3	732	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTATGTGTATGGTT	NA	False	NA	25	True	AATAAA	-19	NA	121036984	121039144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121037049_121037353
ES.7066.5	chr11	+	1790	5	NNC	ENSMUSG00000039329.9	novel	1745	3	NA	NA	2	35841	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	366.500682127605	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGAGAGACGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	121036984	121074986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121037049_121037353_121037428_121037554_121039144_121043610_121043640_121074952
ES.7066.6	chr11	+	2338	3	Genic_Genomic	ENSMUSG00000039321.2	novel	1703	1	NA	NA	-3580	-55	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTCCTGCCTCAGTG	NA	False	NA	NA	False	AATAAA	-13	NA	121047516	121052744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_121048041_121050819_121050957_121051067
ES.7067.1	chr11	+	3252	13	NNC	ENSMUSG00000039307.17	novel	1896	12	NA	NA	26	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.08290376865476	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACCAGCAGAAACTCTAA	NA	False	NA	6	True	AATAAA	-22	NA	121095286	121113475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121096384_121098271_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112061_121112164_121112326_121112417_121113038
ES.7067.10	chr11	+	173	1	Intergenic	novelGene_5707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAAATCGAG	NA	False	NA	NA	False	NA	NA	NA	121104318	121104491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121104300_121104500
ES.7067.11	chr11	+	1566	9	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	1999	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	8.3357288223646	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAACTCTAATCAGCTT	NA	False	NA	13	True	AATAAA	-29	NA	121104874	121113482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121104897_121105996_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112061_121112164_121113038
ES.7067.12	chr11	+	1193	8	NIC	ENSMUSG00000039307.17	novel	2378	13	NA	NA	3249	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	7.08836356003159	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGCAGAAACTCTAATCA	NA	False	NA	9	True	AATAAA	-25	NA	121106124	121113478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121106162_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121113038
ES.7067.13	chr11	+	1371	7	NIC	ENSMUSG00000039307.17	novel	1896	12	NA	NA	4841	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.9810442733528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTCTAATCAGCTTTT	NA	False	NA	15	True	AATAAA	-31	NA	121107716	121113484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112326_121112417_121113038
ES.7067.2	chr11	+	2128	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	28	-7	28	-1	multi-exon	FALSE	canonical	3	14	junction_2	4.64503916979059	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGAAACTCTAATCAGC	NA	False	NA	11	True	AATAAA	-27	NA	121095288	121113480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ES.7067.3	chr11	+	2034	14	NNC	ENSMUSG00000039307.17	novel	2149	13	NA	NA	28	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.38002697316697	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCATGTAGAGCTTTA	NA	False	NA	-51	True	AAAACA	-16	NA	121095288	121113418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121095478_121095646_121095806_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ES.7067.4	chr11	+	1927	12	NIC	ENSMUSG00000039307.17	novel	2149	13	NA	NA	36	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	6.17111372671896	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCCACCAGCAGAAACT	NA	False	NA	2	True	AATAAA	-18	NA	121095296	121113471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ES.7067.5	chr11	+	4587	9	NIC	ENSMUSG00000039307.17	novel	2149	13	NA	NA	52	-8	intron_retention	FALSE	canonical	3	14	junction_2	4.46514277487294	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGAAGTCCCACCAGCA	NA	False	NA	-4	True	AATAAA	-12	NA	121095312	121113465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121112417_121113038
ES.7067.6	chr11	+	1750	9	NIC	ENSMUSG00000039307.17	novel	2149	13	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_2	9.29969757572793	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCCACCAGCAGAAACT	NA	False	NA	2	True	AATAAA	-18	NA	121095600	121113471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121095669_121098464_121098602_121104808_121104897_121105585_121105751_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121112417_121113038
ES.7067.7	chr11	+	5705	5	ISM	ENSMUSG00000039307.17	ENSMUST00000124925.8	3921	9	2242	-6	362	-2	intron_retention	FALSE	canonical	2	6	junction_4	4.65698400254929	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAGAAACTCTAATCAG	NA	False	NA	10	True	AATAAA	-26	NA	121097825	121113479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121108913
ES.7067.8	chr11	+	3231	12	NNC	ENSMUSG00000039307.17	novel	1896	12	NA	NA	389	-6	intron_retention	FALSE	canonical	0	0	junction_1	7.38325109245344	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGTCCCACCAGCAGA	NA	False	NA	-2	True	AATAAA	-14	NA	121097852	121113467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121098190_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121111988_121112061_121112164_121112326_121112417_121113038
ES.7067.9	chr11	+	1965	11	NNC	ENSMUSG00000039307.17	novel	1896	12	NA	NA	462	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.16787870774914	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAACTCTAATCAGCT	NA	False	NA	12	True	AATAAA	-28	NA	121097925	121113481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121098190_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121108913_121108986_121109368_121109565_121111689_121111988_121112061_121112164_121112326_121112417_121113038
ES.7068.1	chr11	-	2469	1	Intergenic	novelGene_5705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGTATAAAAAAATCGTT	NA	False	NA	NA	False	NA	NA	NA	121043290	121040821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121040800_121043300
ES.7069.1	chr11	-	1303	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	3	2	3	-2	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGATCTGGGCGCT	NA	False	NA	-9	True	AGTAAA	-39	NA	121095534	121068418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ES.7069.2	chr11	-	6070	6	NIC	ENSMUSG00000025169.7	novel	1308	9	NA	NA	10	-15	intron_retention	FALSE	canonical	3	172	junction_4	9.41488183675186	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAACCCAAGTGTG	NA	False	NA	-22	True	AGTAAA	-26	NA	121095527	121068431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121068765_121074236_121074361_121085905_121087620_121088256_121088322_121090591_121090635_121091736
ES.7069.3	chr11	-	1333	9	NNC	ENSMUSG00000025169.7	novel	1308	9	NA	NA	63	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	62.6558057964304	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACAGCTAACCCAAGT	NA	False	NA	-25	True	AGTAAA	-23	NA	121095474	121068434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091919_121093716_121093935_121095314
ES.7069.4	chr11	-	4545	7	NNC	ENSMUSG00000025169.7	novel	1308	9	NA	NA	4	-76	intron_retention	FALSE	canonical	0	0	junction_4	67.6288892904997	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGATGTTTTAATCCT	NA	False	NA	-4	True	NA	NA	NA	121095533	121068492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088223_121088322_121090591_121090635_121091736
ES.707.1	chr1	-	1990	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	57	-861	2	856	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAGCTGTGA	NA	False	NA	NA	False	AATAAA	-12	NA	72323416	72297469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ES.707.10	chr1	-	1064	7	NIC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	4	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	101.333881577464	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACCGGTTATCTTTTA	NA	False	NA	-12	True	AATAAA	-13	NA	72323468	72298336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72298593_72301110_72301223_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ES.707.11	chr1	-	3505	6	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-6	5548	-6	2276	5prime_fragment	FALSE	canonical	1	70	junction_3	74.7786065663168	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGCTTTGACTTTT	NA	False	NA	NA	False	NA	NA	NA	72323479	72303878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ES.707.12	chr1	-	4780	4	NNC	ENSMUSG00000026189.14	novel	932	7	NA	NA	1	-3664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.811709112453	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72323417	72309818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72314127_72315318_72315491_72316445_72316580_72323251
ES.707.2	chr1	-	1670	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-4	-480	-4	475	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTTGGTCATGGG	NA	False	NA	NA	False	NA	NA	NA	72323477	72297850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ES.707.3	chr1	-	4004	7	NNC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	-33	0	intron_retention	FALSE	canonical	0	0	junction_5	106.305639026765	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323506	72298330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316178_72316580_72323251
ES.707.4	chr1	-	1200	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	-17	3	-17	-3	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTTATCTTTTAAGG	NA	False	NA	-9	True	AATAAA	-16	NA	72323490	72298333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ES.707.5	chr1	-	6347	6	NIC	ENSMUSG00000026189.14	novel	1186	8	NA	NA	12	-3	intron_retention	FALSE	canonical	2	66	junction_4	75.0157316834276	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTTATCTTTTAAGG	NA	False	NA	-9	True	AATAAA	-16	NA	72323460	72298333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72298593_72301110_72306677_72309435_72309533_72314044_72314127_72316445_72316580_72323251
ES.707.7	chr1	-	878	6	NIC	ENSMUSG00000026189.14	novel	1120	8	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	98.9432160382914	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTTATCTTTTAAGG	NA	False	NA	-9	True	AATAAA	-16	NA	72323416	72298333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72316445_72316580_72323251
ES.707.9	chr1	-	4624	1	NIC	ENSMUSG00000026189.14	novel	1120	8	NA	NA	20461	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTTATCTTTTAAGG	NA	False	NA	-9	True	AATAAA	-16	NA	72302957	72298333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72298300_72303000
ES.7070.1	chr11	-	169	1	Intergenic	novelGene_5706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTTTAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	121100371	121100202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121100200_121100400
ES.7071.1	chr11	-	3238	4	ISM	ENSMUSG00000039294.15	ENSMUST00000147490.6	717	6	1119	-2009	583	0	3prime_fragment	FALSE	canonical	3	67	junction_2	5.18544972870135	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121119029	121113413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_121115520_121116629_121116727_121117594_121117669_121118068
ES.7071.11	chr11	-	1884	8	NNC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	19	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8632281183569	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAATGTGCCTTTCTGTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121120112	121113418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121113598_121114107_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119859
ES.7071.3	chr11	-	5221	3	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	67	junction_1	3.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120077	121113413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121117669_121118068_121118111_121119153
ES.7071.4	chr11	-	4861	4	NIC	ENSMUSG00000039294.15	novel	2417	7	NA	NA	31	0	intron_retention	FALSE	canonical	3	63	junction_1	6.34209919681348	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120100	121113413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121115059_121115374_121115520_121116629_121117669_121118068
ES.7071.5	chr11	-	2407	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	7	3	3	-3	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTGCCTTTCTGTTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	121120128	121113416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
ES.7072.1	chr11	+	2354	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-61	2102	-61	-2102	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGTAGAGAATTAAGAGG	NA	False	NA	NA	False	TTTAAA	-6	NA	121128017	121144580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ES.7072.11	chr11	+	209	1	Intergenic	novelGene_5709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCCATCTTAGGGA	NA	False	NA	NA	False	TTTAAA	-13	NA	121138189	121138398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121138200_121138400
ES.7072.12	chr11	+	4928	1	NIC	ENSMUSG00000000056.8	novel	4395	11	NA	NA	4611	-1298	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGTGGCATTGAAG	NA	False	NA	NA	False	AATAAA	-14	NA	121140456	121145384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121140500_121145400
ES.7072.2	chr11	+	3161	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-51	1285	-51	-1285	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGGAGTCAGCTGTTC	NA	False	NA	NA	False	AATAAA	-27	NA	121128027	121145397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ES.7072.3	chr11	+	2951	12	NNC	ENSMUSG00000000056.8	novel	4395	11	NA	NA	-33	-1292	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	30.4761117669192	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128045	121145390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506_121145098_121145282
ES.7072.5	chr11	+	4424	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	-31	2	-31	-2	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTATGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	121128047	121146680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ES.7072.8	chr11	+	7060	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	2	-2667	2	2667	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGGTGGCTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	121128080	121149349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ES.7072.9	chr11	+	5962	9	NIC	ENSMUSG00000000056.8	novel	4395	11	NA	NA	2	-1294	intron_retention	FALSE	canonical	3	80	junction_4	11.3955857681823	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGGCATTGAAGGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	121128080	121145388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121141257_121141585
ES.7073.1	chr11	-	185	1	Intergenic	novelGene_5708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGTAAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	121131231	121131046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121131000_121131200
ES.7074.1	chr11	+	3716	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-49	-1152	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	88.9058203829152	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTCGTAAAGGTTT	4613	False	NA	76	True	NA	NA	NA	121150766	121199570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
ES.7074.10	chr11	+	3678	2	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-17	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATACAGAGTATCATTG	4645	False	NA	NA	False	AATAAA	-19	NA	121150798	121200721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121197593
ES.7074.100	chr11	+	3831	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	68.4004664677237	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342848	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482073_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.101	chr11	+	3815	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	75	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1494297643762	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342849	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343044_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469623_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.102	chr11	+	3757	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	68.4580670145733	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342852	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431767_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469623_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.103	chr11	+	7689	36	NIC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	96	0	intron_retention	FALSE	canonical	0	0	junction_18	55.7834003544248	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342870	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466951_121467070_121469540_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.104	chr11	+	4160	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	203	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1494297643762	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342977	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343506_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.105	chr11	+	3888	38	NNC	ENSMUSG00000039230.15	novel	4832	10	NA	NA	371	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1494297643762	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121343145	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343414_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.106	chr11	+	5281	1	NIC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	1359	-38463	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAATCAAACCAAAACCT	NA	False	NA	NA	False	NA	NA	NA	121344133	121349414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121344100_121349400
ES.7074.107	chr11	+	2885	30	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	5533	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	73.2322222991869	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121384679	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121384718_121387820_121387957_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469622_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.108	chr11	+	2582	26	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	3650	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	61.128376389366	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121394511	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.109	chr11	+	2556	26	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	3676	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	77.698906041205	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121394537	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481184_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.11	chr11	+	2963	5	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-17	-1209	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	118.971635274968	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTGCCCACCGCAG	4645	False	NA	19	True	AATAAA	-25	NA	121150798	121199513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121197590
ES.7074.110	chr11	+	2407	24	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-3288	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.0651222111507	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121431738	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469640_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.111	chr11	+	2083	20	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-23031	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	68.0846792289306	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121466110	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.112	chr11	+	1192	10	FSM	ENSMUSG00000039230.15	ENSMUST00000155666.8	4832	10	3640	0	251	0	multi-exon	FALSE	canonical	3	272	junction_2	18.4357409183867	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	4798	False	NA	32	True	ATTAAA	-14	NA	121492781	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.12	chr11	+	3954	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-16	-1208	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGCCCACCGCAGT	4646	False	NA	20	True	AATAAA	-26	NA	121150799	121199514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.14	chr11	+	2528	1	Genic_Genomic	ENSMUSG00000039275.10	novel	NA	NA	NA	NA	-11	-34583	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTGAGTATGTGTC	4651	False	NA	NA	False	NA	NA	NA	121150804	121153332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_121150800_121153300
ES.7074.15	chr11	+	4141	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-11	12204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.259299015623	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAGATAGATGTTA	4651	False	NA	NA	False	NA	NA	NA	121150804	121212926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593_121199491_121212593
ES.7074.16	chr11	+	4908	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-10	-8	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	127.137474805818	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAATGAATACAGAGT	4652	False	NA	NA	False	AATAAA	-12	NA	121150805	121200714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121185637_121185725_121186854_121187049_121187739_121187916_121189384_121189682_121197593
ES.7074.17	chr11	+	4946	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	127.760518157997	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4652	False	NA	NA	False	AATAAA	-20	NA	121150805	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
ES.7074.19	chr11	+	5153	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4655	False	NA	NA	False	AATAAA	-20	NA	121150808	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.2	chr11	+	3911	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-45	1163	-45	-1163	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCGGAATGTCTGTCT	4617	False	NA	65	True	NA	NA	NA	121150770	121199559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.20	chr11	+	3034	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-6	2001	-6	-2001	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGTGTATGCTTAAA	4656	False	NA	4	True	AGTAAA	-12	NA	121150809	121198721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.21	chr11	+	4824	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	88.9058203829152	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4657	False	NA	NA	False	AATAAA	-20	NA	121150810	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
ES.7074.22	chr11	+	4128	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-5	1943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.259299015623	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGGCTTTCTCTTTCT	4657	False	NA	NA	False	NA	NA	NA	121150810	121202665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593_121199587_121202435
ES.7074.23	chr11	+	2817	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-2	-2001	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	92.6474555528006	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGTGTATGCTTAAA	4660	False	NA	4	True	AGTAAA	-12	NA	121150813	121198721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197596
ES.7074.24	chr11	+	4944	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-1	148692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	111.031245602308	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAATCAAACCAAAACCT	4661	False	NA	NA	False	NA	NA	NA	121150814	121349414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121189384_121189682_121190409_121190620_121197593_121200733_121349334
ES.7074.25	chr11	+	3461	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	6	-1365	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	108.915057709751	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAGTCTGTTCTAAGTA	4668	False	NA	NA	False	CATAAA	-10	NA	121150821	121199357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121187739_121187916_121189384_121189682_121190409_121190620_121197596
ES.7074.27	chr11	+	3433	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	10	-1373	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	92.6474555528006	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATATGATAAGTCTGT	4672	False	NA	NA	False	CATAAA	-2	NA	121150825	121199349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197596
ES.7074.28	chr11	+	4051	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	10	-1210	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	110.408333018844	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGTGCCCACCGCA	4672	False	NA	18	True	AATAAA	-24	NA	121150825	121199512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121192554_121192797_121197593
ES.7074.31	chr11	+	4816	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	94.3486802736941	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4681	False	NA	NA	False	AATAAA	-20	NA	121150834	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.32	chr11	+	3607	8	ISM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	29	8367	29	1679	5prime_fragment	FALSE	canonical	3	228	junction_1	23.1208007770369	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTTGATAAGGATTCAT	4691	False	NA	NA	False	NA	NA	NA	121150844	121192355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409
ES.7074.34	chr11	+	3755	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	29	-1362	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	472	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGTTCTAAGTATTG	4691	False	NA	NA	False	CATAAA	-13	NA	121150844	121199360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.36	chr11	+	6474	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	29	10449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.259299015623	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAATTTTCAATTTG	4691	False	NA	NA	False	ATTAAA	-8	NA	121150844	121211171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593_121201865_121210839
ES.7074.37	chr11	+	4162	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	30	-1213	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	110.203291385052	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGTGTGTGCCCACC	4692	False	NA	15	True	AATAAA	-21	NA	121150845	121199509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121192554_121192931_121197593
ES.7074.38	chr11	+	1864	2	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	-1214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACATGTGTGTGCCCAC	4694	False	NA	14	True	AATAAA	-20	NA	121150847	121199508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151166_121197962
ES.7074.39	chr11	+	4934	9	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	2	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	111.167033670059	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGAGTATCATTGTCT	4694	False	NA	NA	False	AATAAA	-22	NA	121150847	121200724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121187048_121187178_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.4	chr11	+	3702	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-32	1359	-32	-1359	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTCTAAGTATTGCTT	4630	False	NA	NA	False	CATAAA	-16	NA	121150783	121199363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.40	chr11	+	2653	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	-2341	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	71.1634342552409	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGTTTCTGTGGTTT	4694	False	NA	NA	False	NA	NA	NA	121150847	121198381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
ES.7074.41	chr11	+	2442	8	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	-2345	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	88.9058203829152	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTCTGTTTGTTTCTGTG	4694	False	NA	NA	False	NA	NA	NA	121150847	121198377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121197593
ES.7074.42	chr11	+	4707	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	136.967149346111	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4694	False	NA	NA	False	AATAAA	-20	NA	121150847	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121187739_121187916_121189384_121189682_121197596
ES.7074.44	chr11	+	3502	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	36	-1213	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	131.482597591422	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGTGTGTGCCCACC	4698	False	NA	15	True	AATAAA	-21	NA	121150851	121199509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121187048_121187178_121187739_121187916_121189384_121189682_121197596
ES.7074.45	chr11	+	3973	11	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	36	-1213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.984374046209	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGTGTGTGCCCACC	4698	False	NA	15	True	AATAAA	-21	NA	121150851	121199509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121183612_121183689_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.46	chr11	+	5139	11	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	39	148692	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	105.888809607059	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAATCAAACCAAAACCT	4701	False	NA	NA	False	NA	NA	NA	121150854	121349414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593_121200722_121216427_121216498_121349334
ES.7074.47	chr11	+	10751	8	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	43	0	intron_retention	FALSE	non_canonical	0	0	junction_4	94.6704272511663	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4705	False	NA	NA	False	AATAAA	-20	NA	121150858	121200722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181949_121182012_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.48	chr11	+	4881	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	43	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	91.4795059015952	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	4705	False	NA	NA	False	AATAAA	-18	NA	121150858	121200720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176350_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.5	chr11	+	5063	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	-30	-4	-30	4	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGTATCATTGTCTTC	4632	False	NA	NA	False	AATAAA	-24	NA	121150785	121200726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.52	chr11	+	2925	10	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	219	-2002	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	108.060796788054	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTGTGTATGCTTAA	4881	False	NA	3	True	AGTAAA	-11	NA	121151034	121198720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121157681_121157799_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ES.7074.53	chr11	+	2794	5	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-2489	-1211	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	90.1758698322339	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTGTGTGCCCACCGC	NA	False	NA	17	True	AATAAA	-23	NA	121186852	121199511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
ES.7074.54	chr11	+	3707	3	NIC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-1709	-2	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	125.5	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATACAGAGTATCATT	NA	False	NA	NA	False	AATAAA	-18	NA	121187632	121200720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121187916_121189384_121189682_121197593
ES.7074.55	chr11	+	3133	1	Genic_Genomic	ENSMUSG00000039275.10	novel	NA	NA	NA	NA	8250	2	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGAGTATCATTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	121197591	121200724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr11_+_121197600_121200700
ES.7074.57	chr11	+	171	1	Antisense	novelGene_ENSMUSG00000025173.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTGC	2293	False	NA	NA	False	NA	NA	NA	121239604	121239775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_121239600_121239800
ES.7074.58	chr11	+	1113	1	Intergenic	novelGene_5713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCAGTTTTCCTGTTGTT	7973	False	NA	NA	False	AATAAA	-27	NA	121245284	121246397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121245300_121246400
ES.7074.59	chr11	+	187	1	Intergenic	novelGene_5714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAATTATAT	NA	False	NA	NA	False	NA	NA	NA	121258703	121258890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121258700_121258900
ES.7074.60	chr11	+	155	1	Intergenic	novelGene_5715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121259144	121259299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121259100_121259300
ES.7074.61	chr11	+	2549	6	NNC	ENSMUSG00000039253.8	novel	2520	6	NA	NA	21	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	15.7098695093244	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTAAGACTGGTATATT	3878	False	NA	NA	False	AATAAA	-19	NA	121312247	121322113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121312430_121315751_121315904_121316329_121316473_121317446_121317530_121319870_121319994_121320247
ES.7074.62	chr11	+	2495	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	24	1	24	-1	multi-exon	FALSE	canonical	3	26	junction_4	7.30479294709987	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTAAGACTGGTATATT	3881	False	NA	NA	False	AATAAA	-19	NA	121312250	121322113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
ES.7074.63	chr11	+	3724	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-18	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_21	68.0508339190502	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTATCTCTGGG	NA	False	NA	37	True	ATTAAA	-19	NA	121342756	121507994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121342842_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.65	chr11	+	3982	39	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	77.5778404548611	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342768	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121473547_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121506371_121506434_121507753
ES.7074.66	chr11	+	3925	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	54.3336283547972	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTATCTCTGGG	NA	False	NA	37	True	ATTAAA	-19	NA	121342768	121507994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.67	chr11	+	3907	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	54.3336283547972	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGCCTATCTCTGGG	NA	False	NA	37	True	ATTAAA	-19	NA	121342774	121507994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469622_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.70	chr11	+	3977	39	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	77.5778404548611	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342774	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121506371_121506434_121507753
ES.7074.72	chr11	+	3896	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	54.3336283547972	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342775	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473569_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.74	chr11	+	3910	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	54.3336283547972	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342777	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121473547_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.75	chr11	+	4036	40	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	92.021315027883	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342781	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384340_121384407_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121506371_121506434_121507753
ES.7074.76	chr11	+	8708	36	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_21	55.4526162868915	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342784	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121492867_121493813_121493973_121494059_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.78	chr11	+	1606	15	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	11	7900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	98.5478232605254	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTGTGGTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	121342785	121395777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121394785_121394847_121395641
ES.7074.79	chr11	+	3874	37	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	68.3908294697144	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342785	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.80	chr11	+	3899	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	68.0280739538677	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342785	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469619_121473571_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496171_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.81	chr11	+	3765	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1494297643762	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342785	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121342916_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.82	chr11	+	7248	39	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	87.2360800157234	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCAGCCTCTGCCTATC	NA	False	NA	31	True	ATTAAA	-13	NA	121342790	121507988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469622_121473578_121473611_121481169_121481233_121481796_121481845_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502773_121504636
ES.7074.85	chr11	+	2083	18	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	18	-14965	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	68.3468155602866	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATTGTTTCTCAGGTG	NA	False	NA	NA	False	AATAAA	-21	NA	121342792	121452043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121451693
ES.7074.86	chr11	+	3997	39	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	87.2949794369816	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCCAGCCTCTGCCT	NA	False	NA	28	True	ATTAAA	-10	NA	121342792	121507985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121404864_121404959_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483550_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.87	chr11	+	6798	37	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	19	0	intron_retention	TRUE	canonical	0	0	junction_12	69.1070637882416	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342793	121507989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394525_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.89	chr11	+	3872	37	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	66.8979322052134	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342806	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469662_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500913_121502489_121502575_121507753
ES.7074.9	chr11	+	5387	9	NNC	ENSMUSG00000039275.10	novel	5029	9	NA	NA	-24	337	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	71.1634342552409	480	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTGAGCTACATGAGAC	4638	False	NA	NA	False	AATAAA	-17	NA	121150791	121201059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197596
ES.7074.91	chr11	+	3865	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	68.4131094362179	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCCAGCCTCTGCCT	NA	False	NA	28	True	ATTAAA	-10	NA	121342812	121507985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467063_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.92	chr11	+	3830	37	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	38	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	68.3908294697144	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342812	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469620_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.94	chr11	+	10049	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	42	0	intron_retention	FALSE	canonical	0	0	junction_1	88.1714744779417	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342816	121507990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343414_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121404864_121404959_121408936_121409168_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121473611_121481169_121481233_121482004_121482082_121483456_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.95	chr11	+	3776	37	NIC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	43	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	55.0653651985024	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342817	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7074.96	chr11	+	3801	38	NNC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	48	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	79.5493332514174	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCAGCCTCTGCCTAT	NA	False	NA	30	True	ATTAAA	-12	NA	121342822	121507987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121404864_121404959_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469608_121473552_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ES.7075.1	chr11	+	4317	1	Antisense	novelGene_ENSMUSG00000046605.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGTGAGGACTTCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	121508029	121512346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_121508000_121512300
ES.7076.1	chr11	+	1882	1	Intergenic	novelGene_5720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2823	False	NA	NA	False	AAGAAA	-9	NA	121522251	121524133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121522300_121524100
ES.7077.1	chr11	+	3020	3	Antisense	novelGene_ENSMUSG00000046605.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGCAAAACAAAGCAAAA	NA	False	NA	NA	False	NA	NA	NA	121529907	121541941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_121530676_121535352_121535871_121540207
ES.7077.2	chr11	+	3844	1	Antisense	novelGene_ENSMUSG00000046605.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGTATGTGAGCTACAC	NA	False	NA	NA	False	AAAAAG	-41	NA	121529907	121533751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_+_121529900_121533800
ES.7078.1	chr11	-	3330	1	Intergenic	novelGene_5710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCAGGTATCTACCCTT	NA	False	NA	NA	False	NA	NA	NA	121155327	121151997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121152000_121155300
ES.7079.1	chr11	-	209	1	Intergenic	novelGene_5711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGCTGTGGGCTAGA	NA	False	NA	NA	False	TATAAA	-7	NA	121215384	121215175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121215200_121215400
ES.708.1	chr1	-	182	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGGAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	72328497	72328315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72328300_72328500
ES.7080.1	chr11	-	4644	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	17	2374	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATAGCTTTTAATTTTT	NA	False	NA	NA	False	AATAGA	-21	NA	121245254	121215675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.10	chr11	-	2036	9	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	167.103261488219	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTATCTGTAAAGAGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	121245225	121218063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.11	chr11	-	1778	6	NIC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	1	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	203.382005103696	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTATCTGTAAAGAGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	121245218	121218063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121240057_121240133_121245052
ES.7080.12	chr11	-	2193	10	NIC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	-4	-14	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	157.684636044367	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTATCTGTAAAGAGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	121245231	121218063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226327_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.13	chr11	-	2324	11	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	2	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	199.356564978433	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTATCTGTAAAGAGCAG	NA	False	NA	-13	True	AATAAA	-19	NA	121245217	121218063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121244457_121244529_121245052
ES.7080.14	chr11	-	2205	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	1	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	159.640181828764	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTATCTGTAAAGAGCA	NA	False	NA	-14	True	AATAAA	-18	NA	121245218	121218064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221011_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.15	chr11	-	3181	10	NIC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	21	-15	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	159.015023748631	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCTATCTGTAAAGAGCA	NA	False	NA	-14	True	AATAAA	-18	NA	121245250	121218064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221955_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.17	chr11	-	2215	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	12	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	157.971711798015	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTCTATCTGTAAAGAGC	NA	False	NA	-15	True	AATAAA	-17	NA	121245207	121218065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245078
ES.7080.18	chr11	-	174	1	Intergenic	novelGene_5712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATGGGGTTGAAGGG	5715	False	NA	NA	False	NA	NA	NA	121223588	121223414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121223400_121223600
ES.7080.19	chr11	-	1054	3	NNC	ENSMUSG00000025173.14	novel	2455	2	NA	NA	21	-1207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.5	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTGTGTAAGTAAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	121245250	121239059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121239841_121240057_121240133_121245052
ES.7080.2	chr11	-	4649	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	46	-2374	2	2374	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATAGCTTTTAATTTTT	NA	False	NA	NA	False	AATAGA	-21	NA	121245225	121215675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.3	chr11	-	2473	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	76	-228	24	228	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGGGCATCTCTGCCC	NA	False	NA	NA	False	AATAAA	-13	NA	121245195	121217821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.4	chr11	-	2301	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	17	3	17	-3	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGCAGAGCCATATGTA	NA	False	NA	-2	True	AATAAA	-30	NA	121245254	121218052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.5	chr11	-	2247	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGCAGAGCCATATGT	NA	False	NA	-3	True	AATAAA	-29	NA	121245235	121218053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.7	chr11	-	2055	9	NIC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	14	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	167.103261488219	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTAAAGAGCAGAGCCA	NA	False	NA	-8	True	AATAAA	-24	NA	121245205	121218058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7080.8	chr11	-	3625	9	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	1	-10	intron_retention	FALSE	canonical	3	67	junction_4	145.067171941139	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAAGAGCAGAGCC	NA	False	NA	-9	True	AATAAA	-23	NA	121245218	121218059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ES.7081.1	chr11	-	1508	1	Antisense	novelGene_ENSMUSG00000039253.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	2305	False	NA	NA	False	NA	NA	NA	121323295	121321787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_121321800_121323300
ES.7082.1	chr11	-	2561	1	Antisense	novelGene_ENSMUSG00000039230.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTATGGAGAGAATGTT	7913	False	NA	NA	False	NA	NA	NA	121346473	121343912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_121343900_121346500
ES.7083.1	chr11	-	5002	3	Antisense	novelGene_ENSMUSG00000039230.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCAGCAGCAGC	NA	False	NA	NA	False	NA	NA	NA	121358352	121350586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_121354543_121357247_121357602_121357660
ES.7084.1	chr11	-	2461	1	Intergenic	novelGene_5716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGGCTGCAGTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	121369205	121366744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121366700_121369200
ES.7085.1	chr11	-	2648	1	Antisense	novelGene_ENSMUSG00000039230.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTTAGTGGTAATG	6807	False	NA	NA	False	NA	NA	NA	121381419	121378771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_121378800_121381400
ES.7086.1	chr11	-	1064	1	Intergenic	novelGene_5717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAATAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	121397127	121396063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121396100_121397100
ES.7087.1	chr11	-	4576	3	FSM	ENSMUSG00000039238.7	ENSMUST00000092298.6	3232	3	2	-1346	2	1346	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTACCTCTCTACATTCA	NA	False	NA	NA	False	NA	NA	NA	121410157	121400457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121403326_121403452_121405059_121410055
ES.7087.2	chr11	-	3696	3	FSM	ENSMUSG00000039238.7	ENSMUST00000092298.6	3232	3	-471	7	-471	-7	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTATGTTATTCTCT	NA	False	NA	NA	False	AATAAA	-43	NA	121410630	121401810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121403326_121403452_121405059_121410055
ES.7087.3	chr11	-	2722	3	FSM	ENSMUSG00000039238.7	ENSMUST00000092298.6	3232	3	0	510	0	-510	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAATCTGAGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	121410159	121402313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121403326_121403452_121405059_121410055
ES.7088.1	chr11	-	172	1	Intergenic	novelGene_5718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGATCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	121417384	121417212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121417200_121417400
ES.7089.1	chr11	-	135	1	Intergenic	novelGene_5719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	121428690	121428555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121428600_121428700
ES.709.1	chr1	+	2548	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	2	-1	2	1	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	324	False	NA	23	True	TATAAA	-29	NA	72346587	72434112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.10	chr1	+	4276	23	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	85	3028	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	191.739923717278	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCAAAAAAAAAAATCACAT	407	False	NA	NA	False	GATAAA	-8	NA	72346670	72437139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866_72434586_72435336_72436246_72436710
ES.709.11	chr1	+	2636	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	85	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	154.243273759344	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTCTTGTGTGAAGTC	407	False	NA	19	True	TATAAA	-25	NA	72346670	72434108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72421063_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.13	chr1	+	4826	19	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	88	-2	intron_retention	FALSE	canonical	1	4	junction_8	157.078703635478	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTGTGTGAAGTCT	410	False	NA	20	True	TATAAA	-26	NA	72346673	72434109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.14	chr1	+	2179	18	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	90	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	160.647414219781	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTTCTTGTGTGAAG	412	False	NA	17	True	TATAAA	-23	NA	72346675	72434106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72433054_72433127_72433866
ES.709.15	chr1	+	2447	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	95	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	154.326366833409	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	417	False	NA	22	True	TATAAA	-28	NA	72346680	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378125_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.16	chr1	+	2388	19	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	103	10924	103	-10924	5prime_fragment	FALSE	canonical	3	464	junction_5	74.141110869663	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTCTCCCACCCCTCTC	425	False	NA	NA	False	AATACA	-12	NA	72346688	72423187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860
ES.709.17	chr1	+	2734	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	106	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	151.870429972395	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTGTGTGAAGTCT	428	False	NA	20	True	TATAAA	-26	NA	72346691	72434109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72347020_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.18	chr1	+	2428	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	154.399838082817	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	428	False	NA	22	True	TATAAA	-28	NA	72346691	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364333_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.19	chr1	+	1003	5	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	106	78873	106	-78873	5prime_fragment	FALSE	canonical	3	487	junction_1	72.2322642591245	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGGGAGAAAACGT	428	False	NA	NA	False	AATAAA	-19	NA	72346691	72355238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617
ES.709.2	chr1	+	5025	20	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	4	0	intron_retention	FALSE	canonical	3	464	junction_5	73.7845932765516	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	326	False	NA	22	True	TATAAA	-28	NA	72346589	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.20	chr1	+	2634	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	106	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	151.959040533954	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTTCTTGTGTGAAG	428	False	NA	17	True	TATAAA	-23	NA	72346691	72434106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395779_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.22	chr1	+	2294	19	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	4979	2	4979	-2	3prime_fragment	FALSE	canonical	3	464	junction_3	72.1674364855015	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTGTGTGAAGTCT	5301	False	NA	20	True	TATAAA	-26	NA	72351564	72434109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.24	chr1	+	1381	12	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	27207	0	27207	0	3prime_fragment	FALSE	canonical	3	542	junction_3	66.2808948701916	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	NA	False	NA	22	True	TATAAA	-28	NA	72373792	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.25	chr1	+	1277	11	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	31561	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	205.250676003759	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	NA	False	NA	22	True	TATAAA	-28	NA	72378146	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396035_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.26	chr1	+	4993	6	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	38872	2	intron_retention	FALSE	canonical	3	647	junction_2	31.0959804476399	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGTGAAGTCTCATT	2099	False	NA	24	True	TATAAA	-30	NA	72385457	72434113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72385584_72393401_72396046_72420777_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.27	chr1	+	4481	1	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	83043	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTTGTGTGAAGTCT	NA	False	NA	20	True	TATAAA	-26	NA	72429628	72434109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72429600_72434100
ES.709.28	chr1	+	2738	3	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	86614	3042	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATCTCTTCCGTACGGC	NA	False	NA	NA	False	GATAAA	-22	NA	72433199	72437153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72434586_72435336_72436246_72436710
ES.709.3	chr1	+	4357	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	10	0	intron_retention	FALSE	canonical	1	2	junction_16	196.299127608861	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	332	False	NA	22	True	TATAAA	-28	NA	72346595	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395649_72395839_72395975_72396046_72420777_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.4	chr1	+	2526	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.649033734249	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	360	False	NA	22	True	TATAAA	-28	NA	72346623	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349578_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ES.709.5	chr1	+	2448	20	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	233.067025181914	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	361	False	NA	22	True	TATAAA	-28	NA	72346624	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349597_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422810_72422918_72433054_72433127_72433866
ES.709.7	chr1	+	2475	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	226.995655244765	403	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	369	False	NA	22	True	TATAAA	-28	NA	72346632	72434111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378253_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393485_72395983_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433123_72433866
ES.709.9	chr1	+	4112	20	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	67	1	intron_retention	FALSE	canonical	3	464	junction_5	75.3393798797469	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	389	False	NA	23	True	TATAAA	-29	NA	72346652	72434112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72422614_72422860_72422929_72433054_72433127_72433866
ES.7090.1	chr11	-	5343	2	Antisense	novelGene_ENSMUSG00000039230.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTTGCTTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	121505463	121498256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr11_-_121502776_121504639
ES.7090.10	chr11	-	5193	6	ISM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	40107	11	40107	-11	intron_retention	FALSE	canonical	3	70	junction_2	9.3936148526539	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCACAATCTTGACTA	NA	False	NA	-9	True	AATAAA	-15	NA	121523872	121507033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698
ES.7090.11	chr11	-	5602	4	ISM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	45444	11	45444	-11	intron_retention	FALSE	canonical	3	70	junction_2	11.9536140513607	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGCACAATCTTGACTA	1270	False	NA	-9	True	AATAAA	-15	NA	121518535	121507033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747
ES.7090.14	chr11	-	3438	12	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	36	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	36.7778679404874	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGCACAATCTTGACT	NA	False	NA	-10	True	AATAAA	-14	NA	121563943	121507034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121509368_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535354_121535419_121561695_121561796_121561882_121562000_121563810
ES.7090.15	chr11	-	3101	6	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	41525	-12	intron_retention	FALSE	canonical	3	70	junction_2	9.55824251627882	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGCACAATCTTGACT	NA	False	NA	-10	True	AATAAA	-14	NA	121522454	121507034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121515054_121520698_121520824_121521597
ES.7090.16	chr11	-	3443	13	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	15	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.7178872036997	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGCACAATCTTGACT	NA	False	NA	-10	True	AATAAA	-14	NA	121563964	121507034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515660_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.17	chr11	-	2604	11	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	25	-14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.6850145212627	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAGGCACAATCTTGA	NA	False	NA	-12	True	AATAAA	-12	NA	121563954	121507036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.18	chr11	-	2962	14	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.7209221658598	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAAGGCACAATCTTGA	NA	False	NA	-12	True	AATAAA	-12	NA	121563979	121507036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508682_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121541229_121541339_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.19	chr11	-	4525	11	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	36	-20	intron_retention	FALSE	canonical	2	12	junction_8	23.2688633155984	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGATATTAAGGCACAA	NA	False	NA	-18	True	AATAAA	-6	NA	121563943	121507042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121562000_121563810
ES.7090.2	chr11	-	5816	14	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	38	4851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.1023494852586	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGCTTCTCTGAAAACC	NA	False	NA	NA	False	NA	NA	NA	121563941	121502171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121502776_121504639_121508682_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.21	chr11	-	5503	3	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	47316	-20	intron_retention	FALSE	canonical	3	70	junction_1	14.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGATATTAAGGCACAA	3142	False	NA	-18	True	AATAAA	-6	NA	121516663	121507042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121510555_121514257_121514333_121514747
ES.7090.22	chr11	-	4031	12	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	50	-565	intron_retention	FALSE	canonical	3	46	junction_8	15.8077290437514	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGTAAAGGGCAGA	NA	False	NA	-2	True	AATAAA	-25	NA	121563929	121507587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.23	chr11	-	2283	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	15	566	15	-566	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAACAATGTAAAGGGCAG	NA	False	NA	-3	True	AATAAA	-24	NA	121563964	121507588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.24	chr11	-	2957	5	ISM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	47426	573	47426	-573	3prime_fragment	FALSE	canonical	3	70	junction_2	10.4163333279998	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTCTAACAATGTAA	3252	False	NA	-10	True	AATAAA	-17	NA	121516553	121507595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917
ES.7090.25	chr11	-	2145	12	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	15	-573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.2216813837716	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTCTAACAATGTAA	NA	False	NA	-10	True	AATAAA	-17	NA	121563964	121507595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121561934_121563810
ES.7090.26	chr11	-	2196	13	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	29	-573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	26.1675955249151	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTCTAACAATGTAA	NA	False	NA	-10	True	AATAAA	-17	NA	121563950	121507595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121561934_121563810
ES.7090.27	chr11	-	2183	12	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	12	-573	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	26.1562375033295	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTCTAACAATGTAA	NA	False	NA	-10	True	AATAAA	-17	NA	121563967	121507595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.28	chr11	-	1358	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	111	1395	111	-1395	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCATGACTTGGCTTGA	NA	False	NA	NA	False	NA	NA	NA	121563868	121508417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.29	chr11	-	1450	1	Intergenic	novelGene_5721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAACGTAGAGGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	121526048	121524598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121524600_121526000
ES.7090.3	chr11	-	3033	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	27	-196	27	196	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAATGGGTCTGGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	121563952	121506826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.30	chr11	-	1608	5	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	25	-22050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.7442743086482	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATAGTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	121563954	121540143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121541326_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.31	chr11	-	834	4	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	36	-27138	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	36.4173340899938	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTGTATGTTTCAATT	NA	False	NA	NA	False	AATACA	-18	NA	121563943	121545231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121545716_121561695_121561796_121561882_121562000_121563810
ES.7090.32	chr11	-	4727	3	ISM	ENSMUSG00000046605.15	ENSMUST00000062654.8	1488	9	42	39219	42	-39219	5prime_fragment	FALSE	canonical	3	71	junction_2	8	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	121563937	121557312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr11_-_121561796_121561882_121562000_121563810
ES.7090.5	chr11	-	2919	13	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	36.344321732868	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGACTATAACATTCATA	NA	False	NA	2	True	AATAAA	-26	NA	121563954	121507022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521718_121525258_121525314_121530577_121530674_121535352_121535485_121561695_121561796_121561882_121562000_121563810
ES.7090.6	chr11	-	2836	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	25	3	25	-3	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTTGACTATAACATTC	NA	False	NA	-1	True	AATAAA	-23	NA	121563954	121507025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.7	chr11	-	3431	4	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	47617	-4	intron_retention	FALSE	canonical	0	0	junction_3	35.873233599564	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCTTGACTATAACATT	3443	False	NA	-2	True	AATAAA	-22	NA	121516362	121507026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514328_121514747
ES.7090.8	chr11	-	2900	13	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	26	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.073226092122	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCTTGACTATAACATT	NA	False	NA	-2	True	AATAAA	-22	NA	121563953	121507026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535485_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ES.7090.9	chr11	-	2765	12	NIC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	25	-9	combination_of_known_splicesites	FALSE	canonical	2	12	junction_9	22.2443232613485	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCACAATCTTGACTATA	NA	False	NA	-7	True	AATAAA	-17	NA	121563954	121507031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121562000_121563810
ES.7091.1	chr11	+	3236	4	FSM	ENSMUSG00000039198.9	ENSMUST00000036690.7	3194	4	-36	-6	-36	6	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAAAGTGTTATGTTT	2448	False	NA	NA	False	ATTAAA	-15	NA	121721036	121734255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121722086_121722870_121722993_121727206_121727353_121732336
ES.7091.2	chr11	+	4694	3	FSM	ENSMUSG00000039198.9	ENSMUST00000125199.2	1543	3	-6	-3145	-6	3145	multi-exon	FALSE	canonical	1	2	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCGATGCATTCCATTC	2478	False	NA	NA	False	AATAAA	-38	NA	121721066	121730759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr11_+_121722086_121722870_121722993_121727206
ES.7091.3	chr11	+	1256	3	NNC	ENSMUSG00000039198.9	novel	1543	3	NA	NA	1	-4218	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTAGGAATCTATTG	2485	False	NA	NA	False	ATTAAA	-14	NA	121721073	121723396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121722086_121722870_121722993_121723274
ES.7091.4	chr11	+	3012	5	NNC	ENSMUSG00000039198.9	novel	3194	4	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1.22474487139159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAAAGTGTTATGTTT	2493	False	NA	NA	False	ATTAAA	-15	NA	121721081	121734255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr11_+_121722086_121722870_121722993_121727206_121727353_121732336_121733846_121734024
ES.7092.1	chr11	+	511	3	Intergenic	novelGene_5742	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTTCCGTGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	121816463	121826069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_+_121816553_121824785_121824872_121825733
ES.7093.1	chr11	-	5511	4	Intergenic	novelGene_5722	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCATGTGTCCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	121816151	121792429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.11	chr11	-	2971	4	Intergenic	novelGene_5731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	81.0198878191165	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	-2	True	NA	NA	NA	121816188	121795184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121816055
ES.7093.12	chr11	-	2756	4	Intergenic	novelGene_5736	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_3	62.3912387011723	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121847550	121795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121847453
ES.7093.13	chr11	-	2740	4	Intergenic	novelGene_5733	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	83.2079056073133	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121816151	121795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798822_121799014_121799142_121816055
ES.7093.14	chr11	-	2730	3	Intergenic	novelGene_5735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	94	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121816187	121795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121799014_121799142_121816055
ES.7093.15	chr11	-	2761	5	Intergenic	novelGene_5734	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	90.136008342948	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121816153	121795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121796087_121796260_121797835_121798775_121798837_121799014_121799142_121816055
ES.7093.16	chr11	-	2966	5	Intergenic	novelGene_5732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	73.48936997961	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121816141	121795185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121800343_121800387_121816055
ES.7093.18	chr11	-	2600	2	Intergenic	novelGene_5737	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGAGTCTTGTCTTGCTT	NA	False	NA	-6	True	NA	NA	NA	121816187	121795188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121816055
ES.7093.19	chr11	-	2622	5	Intergenic	novelGene_5738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	77.1536616110992	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGAGTCTTGTCTTG	NA	False	NA	-9	True	NA	NA	NA	121816198	121795191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121796087_121796260_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.2	chr11	-	5685	3	Intergenic	novelGene_5723	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	33	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGAGCATGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	121816151	121792433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121799142_121816055
ES.7093.20	chr11	-	1363	4	Intergenic	novelGene_5739	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTTTTTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	121816155	121796581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.21	chr11	-	1526	4	Intergenic	novelGene_5740	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	81.0198878191165	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTTGAATTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	121816149	121796590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121816055
ES.7093.22	chr11	-	2502	3	Intergenic	novelGene_5741	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTTGAATTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	121816185	121796591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121798837_121799014_121799142_121816055
ES.7093.23	chr11	-	5731	1	Intergenic	novelGene_5743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTGCATAAGCGTGTC	341	False	NA	NA	False	CATAAA	-11	NA	121829804	121824073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121824100_121829800
ES.7093.24	chr11	-	833	4	Intergenic	novelGene_5744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	32.9983164553722	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCACCTAGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	121847587	121826872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121827384_121836089_121836151_121836329_121836457_121847453
ES.7093.25	chr11	-	3268	4	Intergenic	novelGene_5745	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	17.326921891156	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCTGATTCTTATTG	NA	False	NA	NA	False	AAAAAG	-3	NA	121847597	121832029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121834966_121836089_121836151_121836329_121836457_121847453
ES.7093.26	chr11	-	3204	3	Intergenic	novelGene_5746	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	33.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGACCTGATTCTTA	NA	False	NA	NA	False	NA	NA	NA	121847597	121832032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121834966_121836329_121836457_121847453
ES.7093.28	chr11	-	3918	1	Intergenic	novelGene_5747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAATAAATACACCA	NA	False	NA	NA	False	NA	NA	NA	121847576	121843658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121843700_121847600
ES.7093.3	chr11	-	4537	4	Intergenic	novelGene_5724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGAGTTCCCCTATATA	NA	False	NA	NA	False	NA	NA	NA	121816149	121793401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.4	chr11	-	3602	4	Intergenic	novelGene_5725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGCTCAGTGTTACTC	NA	False	NA	NA	False	AAGAAA	-38	NA	121816176	121794363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.5	chr11	-	3438	4	Intergenic	novelGene_5726	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	81.0198878191165	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTACTCTGCTTTGT	NA	False	NA	NA	False	AATAGA	-17	NA	121816149	121794678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797835_121798775_121798837_121799014_121799142_121816055
ES.7093.6	chr11	-	3330	4	Intergenic	novelGene_5727	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCAGTGTACTCTGCTT	NA	False	NA	NA	False	AATAGA	-14	NA	121816222	121794681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.7	chr11	-	2955	4	Intergenic	novelGene_5728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTTGCTTGGTTCCT	NA	False	NA	1	True	NA	NA	NA	121816347	121795181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
ES.7093.8	chr11	-	3903	3	Intergenic	novelGene_5729	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	12.5	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTGCTTGGTTCC	NA	False	NA	0	True	NA	NA	NA	121816177	121795182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121798837_121799014_121799142_121816055
ES.7093.9	chr11	-	2408	2	Intergenic	novelGene_5730	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTGTCTTGCTTGGTTC	NA	False	NA	-1	True	NA	NA	NA	121816167	121795183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr11_-_121797498_121816073
ES.7094.1	chr12	+	3964	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	-80	122	-80	-122	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGAGTGTTAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3285423	3291288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ES.7094.10	chr12	+	823	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-2	14	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	68.3569065030496	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCATAGATTTGTGT	NA	False	NA	24	True	AATAAA	-33	NA	3285501	3288287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028
ES.7094.11	chr12	+	1501	8	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	72.4704021216487	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACAAAAAGCCTGTTAGG	NA	False	NA	NA	False	AATAAA	-17	NA	3285502	3300373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299866
ES.7094.12	chr12	+	2236	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-23	12093	-1	11	5prime_fragment	FALSE	canonical	3	138	junction_2	36.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAATTTGCATAGATTTG	NA	False	NA	21	True	AATAAA	-30	NA	3285502	3288284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3287413_3287590_3287661_3288028
ES.7094.13	chr12	+	3845	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-18	-3015	4	-122	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGAGTGTTAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3285507	3291288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ES.7094.14	chr12	+	1487	7	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	1	4	junction_6	82.2869302434408	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGTTAGGCCATG	NA	False	NA	NA	False	AATAAA	-22	NA	3285508	3300378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3291521_3291579_3297351_3297439_3299738
ES.7094.15	chr12	+	4000	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	5	1	5	-1	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAAGCTCTTACTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	3285508	3291409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ES.7094.16	chr12	+	1626	8	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_7	72.347799424949	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGCCTGTTAGGCCA	NA	False	NA	NA	False	AATAAA	-20	NA	3285508	3300376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299738
ES.7094.17	chr12	+	1469	8	NNC	ENSMUSG00000079179.10	novel	823	8	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	72.6119122177509	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGCCTGTTAGGCCA	NA	False	NA	NA	False	AATAAA	-20	NA	3285510	3300376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299866
ES.7094.18	chr12	+	3277	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-404	8535	7	-1	5prime_fragment	FALSE	canonical	3	40	junction_4	60.7345659406569	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAAGCTCTTACTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	3285510	3291409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
ES.7094.19	chr12	+	984	4	NNC	ENSMUSG00000079179.10	novel	812	4	NA	NA	8	225	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	88.0656320908194	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGGTGGATTTGCA	NA	False	NA	NA	False	CATAAA	-30	NA	3285511	3288498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285863_3287284_3287413_3287590_3287661_3288063
ES.7094.2	chr12	+	3450	5	NNC	ENSMUSG00000079179.10	novel	746	5	NA	NA	-27	-173	intron_retention	FALSE	non_canonical	0	0	junction_4	82.2526595314705	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAAATTGTTTTAACAC	NA	False	NA	NA	False	GATAAA	-3	NA	3285476	3291237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3290490_3290864
ES.7094.20	chr12	+	4474	2	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	8	1713	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGACTGTTTCATTCAA	NA	False	NA	NA	False	ATTAAA	-20	NA	3285511	3293123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3286782_3289919
ES.7094.21	chr12	+	824	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-12	0	10	0	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285513	3288273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ES.7094.22	chr12	+	558	2	NNC	ENSMUSG00000079179.10	novel	812	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285514	3288273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285863_3288063
ES.7094.23	chr12	+	2434	6	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-11	1707	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	72.3143139357624	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAAGACTGTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	3285514	3293117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521
ES.7094.24	chr12	+	3959	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-9	-3138	-9	1	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCTCTTACTTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	3285516	3291411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ES.7094.25	chr12	+	3920	7	NIC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-9	1	intron_retention	FALSE	canonical	1	5	junction_6	73.2529862872498	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTGTTAGGCCATG	NA	False	NA	NA	False	AATAAA	-22	NA	3285516	3300378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833_3289010_3291521_3291579_3297351
ES.7094.26	chr12	+	856	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	13	3137	-9	0	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285516	3288273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ES.7094.27	chr12	+	2405	6	NNC	ENSMUSG00000079179.10	novel	823	8	NA	NA	-9	1707	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	72.1703540243499	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAAGACTGTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	3285516	3293117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521
ES.7094.28	chr12	+	2468	6	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-398	6826	-9	1708	5prime_fragment	FALSE	canonical	3	23	junction_5	69.4682661364166	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACAAGACTGTTTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	3285516	3293118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521
ES.7094.29	chr12	+	5224	3	ISM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	-9	9091	-9	-124	intron_retention	FALSE	canonical	3	138	junction_2	36.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCAAGAGTGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	3285516	3291286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3287413_3287590_3287661_3288028
ES.7094.3	chr12	+	7230	5	NIC	ENSMUSG00000079179.10	novel	1075	7	NA	NA	-24	6	intron_retention	FALSE	canonical	1	5	junction_4	74.2647291787966	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTAGGCCATGTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	3285479	3300383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3291579_3297351
ES.7094.30	chr12	+	4950	5	FSM	ENSMUSG00000079179.10	ENSMUST00000179908.8	746	5	-315	-3889	-9	1713	multi-exon	FALSE	canonical	3	40	junction_4	71.5925973826903	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGACTGTTTCATTCAA	NA	False	NA	NA	False	ATTAAA	-20	NA	3285516	3293123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063_3288113_3288833
ES.7094.31	chr12	+	3808	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-8	-122	intron_retention	FALSE	canonical	3	44	junction_1	68.3569065030496	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAGAGTGTTAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3285517	3291288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288028
ES.7094.32	chr12	+	752	2	Intergenic	novelGene_5748	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAATACAAGACTGTT	NA	False	NA	NA	False	ATTAAA	-12	NA	3292046	3293115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3292473_3292789
ES.7094.4	chr12	+	762	4	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-10	12	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	83.5158002349788	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTTGCATAGATTTGT	NA	False	NA	22	True	AATAAA	-31	NA	3285493	3288285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285863_3287346_3287413_3287590_3287661_3288028
ES.7094.5	chr12	+	1616	4	NIC	ENSMUSG00000079179.10	novel	812	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	91.3491470494753	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285493	3288273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3286702_3287284_3287413_3287590_3287661_3288063
ES.7094.6	chr12	+	973	5	NNC	ENSMUSG00000079179.10	novel	4006	4	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.663337970099	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCAGTTCTCTCAGGAC	NA	False	NA	4	True	AATAAA	-13	NA	3285496	3288267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3285930_3286598_3286702_3287284_3287413_3287590_3287661_3288028
ES.7094.7	chr12	+	4141	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	-29	-3300	-7	163	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGTGAGTTTTCTATTT	NA	False	NA	NA	False	GATAAA	-14	NA	3285496	3291573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ES.7094.8	chr12	+	5723	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	-7	-1710	-7	1710	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGACTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	3285496	3293120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ES.7094.9	chr12	+	4023	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-414	7799	-3	735	intron_retention	FALSE	canonical	3	40	junction_4	60.7345659406569	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCGTGGTGGCACATGCC	NA	False	NA	NA	False	AATAAA	-15	NA	3285500	3292145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
ES.7095.1	chr12	+	155	1	Intergenic	novelGene_5749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	3322773	3322928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3322800_3322900
ES.7095.2	chr12	+	260	1	Intergenic	novelGene_5750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTAGCCAATGGATAT	NA	False	NA	NA	False	NA	NA	NA	3322774	3323034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3322800_3323000
ES.7096.1	chr12	+	2927	2	Antisense	novelGene_ENSMUSG00000020671.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAACAAAAAAAAGTCG	NA	False	NA	NA	False	NA	NA	NA	3335563	3341596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_3337417_3340522
ES.7097.1	chr12	+	178	1	Intergenic	novelGene_5751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGAAAATGACTGACACA	1519	False	NA	NA	False	NA	NA	NA	3346913	3347091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3346900_3347100
ES.7098.1	chr12	+	169	1	Intergenic	novelGene_5752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAATTAATTAAAAAAAT	1497	False	NA	NA	False	NA	NA	NA	3351768	3351937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3351800_3351900
ES.7099.1	chr12	-	2455	1	Antisense	novelGene_ENSMUSG00000079179.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTTCTTGGTCATGA	3088	False	NA	NA	False	NA	NA	NA	3285738	3283283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3283300_3285700
ES.71.1	chr1	+	3592	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-181	295	-181	-222	multi-exon	TRUE	canonical	3	15	junction_1	31.0518090254014	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTAGATTTTTGTT	NA	False	NA	NA	False	ATTAAA	-38	NA	9868150	9970773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.10	chr1	+	3276	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	16	-219	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	31.8631797255425	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGATTTTTGTTGTT	9830	False	NA	NA	False	ATTAAA	-41	NA	9918512	9970776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9959094_9959251_9961585_9961676_9968944
ES.71.12	chr1	+	3675	17	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	33.8800734208177	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGACTATTTCATGCT	9839	False	NA	NA	False	ATTAAA	-16	NA	9918521	9971070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954613_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.13	chr1	+	3287	17	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-23	-219	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	41.8791042764766	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTAGATTTTTGTTGTT	9840	False	NA	NA	False	ATTAAA	-41	NA	9918522	9970776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9957372_9957394_9959094_9959251_9961585_9961676_9968944
ES.71.14	chr1	+	2472	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	36	1172	-13	53	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCCTTTGACTCTTTGA	9850	False	NA	NA	False	NA	NA	NA	9918532	9969896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.15	chr1	+	2649	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	36	995	-13	-5	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGGTTGGTGTGAAT	9850	False	NA	NA	False	AATAAA	-6	NA	9918532	9970073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.16	chr1	+	1543	16	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-12	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	44.0648007673547	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGTATTTAGTGAAACA	9851	False	NA	NA	False	ATTAAA	-19	NA	9918533	9959312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9957341_9957394_9959094
ES.71.17	chr1	+	3235	18	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-12	-254	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	32.8168873735126	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAAGTGCAATATT	9851	False	NA	NA	False	ATTAAA	-6	NA	9918533	9970741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935390_9935470_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.18	chr1	+	3503	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	34.1285152849572	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGGACTATTTCATGC	9860	False	NA	NA	False	ATTAAA	-15	NA	9918542	9971069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.19	chr1	+	5278	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	47	-1645	-2	1643	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTGTTAACTTAATCTT	9861	False	NA	NA	False	ATTAAA	-19	NA	9918543	9972713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.2	chr1	+	2873	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-147	980	-147	10	multi-exon	FALSE	canonical	3	15	junction_1	31.0518090254014	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGTGTCACCTACAC	NA	False	NA	NA	False	AATAAA	-21	NA	9868184	9970088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.20	chr1	+	3206	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	0	-220	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	34.1285152849572	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTAGATTTTTGTTGT	9863	False	NA	NA	False	ATTAAA	-40	NA	9918545	9970775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.21	chr1	+	6618	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	49	-2987	0	2985	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGATCCAATCCATGAAT	9863	False	NA	NA	False	NA	NA	NA	9918545	9974055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.22	chr1	+	1941	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	50	1689	1	-20	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAACTTTTTGCTATT	9864	False	NA	NA	False	TTTAAA	-39	NA	9918546	9969379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.23	chr1	+	2859	7	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	1	6993	intron_retention	TRUE	non_canonical	0	0	junction_6	45.3492619075058	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	9864	False	NA	NA	False	NA	NA	NA	9918546	9949772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9949522_9949559
ES.71.24	chr1	+	3682	18	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	42.0230617192867	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	9864	False	NA	NA	False	ATTAAA	-14	NA	9918546	9971068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9957341_9957394_9959094_9959251_9961585_9961676_9968944
ES.71.25	chr1	+	5948	15	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	1	-222	intron_retention	FALSE	canonical	3	97	junction_4	18.994762973203	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTAGATTTTTGTT	9864	False	NA	NA	False	ATTAAA	-38	NA	9918546	9970773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.26	chr1	+	1677	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	24	-165	combination_of_known_splicesites	FALSE	canonical	3	9	junction_13	31.8631797255425	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAGAAATACGTATT	9887	False	NA	NA	False	AATATA	-44	NA	9918569	9969234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9959094_9959251_9961585_9961676_9968944
ES.71.27	chr1	+	3516	18	NNC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	-36	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32.8168873735126	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTATTTCATGCTAACT	9903	False	NA	NA	False	ATTAAA	-20	NA	9918585	9971074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918611_9935355_9935390_9935470_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.28	chr1	+	2747	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-9	-10	-9	10	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGTGTCACCTACAC	9930	False	NA	NA	False	AATAAA	-21	NA	9918612	9970088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.29	chr1	+	3721	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-3	-990	-3	0	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	9936	False	NA	NA	False	ATTAAA	-14	NA	9918618	9971068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.3	chr1	+	3840	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-127	-7	-127	5	multi-exon	FALSE	canonical	3	15	junction_1	31.0518090254014	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTATTTCATGCTAACTA	NA	False	NA	NA	False	ATTAAA	-21	NA	9868204	9971075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.30	chr1	+	3809	18	NNC	ENSMUSG00000025915.15	novel	2728	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.0040367148923	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	9937	False	NA	NA	False	ATTAAA	-14	NA	9918619	9971068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918774_9921779_9921869_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.31	chr1	+	3420	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	-1	-691	-1	-226	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACACATTTTAGATTTT	9938	False	NA	NA	False	ATTAAA	-34	NA	9918620	9970769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.32	chr1	+	5549	17	NNC	ENSMUSG00000025915.15	novel	2728	17	NA	NA	17	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	38.950088254072	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTATTTCATGCTAAC	9956	False	NA	NA	False	ATTAAA	-19	NA	9918638	9971073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9960787_9961278_9961676_9968944
ES.71.33	chr1	+	2276	16	NIC	ENSMUSG00000025915.15	novel	2728	17	NA	NA	93	8	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	39.5050489037653	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATGTCTCTGTCACATA	NA	False	NA	NA	False	AATAAA	-35	NA	9918714	9969851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.34	chr1	+	3486	16	NIC	ENSMUSG00000025915.15	novel	2728	17	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	39.5050489037653	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	9918721	9971068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.35	chr1	+	2780	17	NNC	ENSMUSG00000025915.15	novel	2728	17	NA	NA	103	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.0291694726745	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGGTTGGTGTGAAT	NA	False	NA	NA	False	AATAAA	-6	NA	9918724	9970073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9918934_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.36	chr1	+	5207	16	ISM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	16856	-1638	16731	1636	3prime_fragment	FALSE	canonical	3	97	junction_3	19.2057861651697	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTAGCCTGTTAACT	3253	False	NA	NA	False	ATTAAA	-12	NA	9935352	9972706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.37	chr1	+	2213	14	NIC	ENSMUSG00000025915.15	novel	3706	17	NA	NA	-15069	2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	35.1436612076335	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTGTGAATGTGTGTC	6523	False	NA	NA	False	AATAAA	-13	NA	9938622	9970080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.38	chr1	+	5780	1	FSM	ENSMUSG00000025915.15	ENSMUST00000188486.2	3748	1	1836	-3868	1836	2197	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9967487	9973267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9967500_9973300
ES.71.4	chr1	+	1986	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-114	1834	-114	-165	multi-exon	FALSE	canonical	3	15	junction_1	31.0518090254014	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAAGAAATACGTATT	NA	False	NA	NA	False	AATATA	-44	NA	9868217	9969234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.5	chr1	+	2043	13	ISM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-90	14377	-90	-2611	intron_retention	FALSE	canonical	3	15	junction_1	33.4061704213791	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTATTACGTCTTAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	9868241	9956691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891
ES.71.6	chr1	+	2474	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	59	1173	8	52	multi-exon	FALSE	canonical	3	15	junction_1	31.0518090254014	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTGACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	9868390	9969895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.7	chr1	+	3448	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	-11	243	-11	-170	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATCGACATCTAATTT	9803	False	NA	NA	False	CATAAA	-14	NA	9918485	9970825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.8	chr1	+	2843	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	4	833	4	2	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATGTCTCTTGGTGTCT	9818	False	NA	NA	False	NA	NA	NA	9918500	9970235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.71.9	chr1	+	3678	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	4	-2	4	0	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGACTATTTCATGCT	9818	False	NA	NA	False	ATTAAA	-16	NA	9918500	9971070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ES.710.1	chr1	-	5271	1	Antisense	novelGene_ENSMUSG00000026187.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGAGGCTCAACAGAG	NA	False	NA	NA	False	AATAAA	-42	NA	72388389	72383118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_72383100_72388400
ES.7100.1	chr12	-	5085	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	43	-1615	43	1615	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAAATAATTGAGTG	NA	False	NA	NA	False	AATAAA	-8	NA	3359926	3295812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.10	chr12	-	3569	7	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	-39	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	637.449191875103	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTACTTCTGTTCATA	NA	False	NA	-44	True	AATAAA	-16	NA	3360008	3297469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3313223_3313283_3314688_3314750_3359291
ES.7100.11	chr12	-	3297	5	NIC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	33	-44	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	580.870252293918	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCTACTTCTGTTCA	NA	False	NA	-46	True	AATAAA	-14	NA	3359936	3297471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_3299871_3302611_3302714_3303268_3303359_3314688_3314750_3359291
ES.7100.13	chr12	-	4815	5	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	48678	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	591.96932986431	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCTACTTCTGTTCA	NA	False	NA	-46	True	AATAAA	-14	NA	3311291	3297471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3308545_3310745
ES.7100.14	chr12	-	3495	6	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	-40	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	543.802022798739	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGGTCTACTTCTGTTC	NA	False	NA	-47	True	AATAAA	-13	NA	3360009	3297472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299858_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.15	chr12	-	3443	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-43	113	-43	-113	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGGTACTAGCTACAA	NA	False	NA	NA	False	ATTAAA	-19	NA	3360012	3297540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.16	chr12	-	3338	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-41	216	-41	-216	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTTATTTGCTTAC	NA	False	NA	NA	False	TATAAA	-27	NA	3360010	3297643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.17	chr12	-	3227	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-53	339	-53	-339	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAGGCTACCTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	3360022	3297766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.18	chr12	-	2016	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	13	1484	13	-1484	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCCTATTAACTGTCAG	NA	False	NA	-7	True	AGTAAA	-17	NA	3359956	3298911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.19	chr12	-	1571	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-44	1986	-44	-1986	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATTTTCTGTCATGAA	NA	False	NA	1	True	AATAAA	-33	NA	3360013	3299413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.2	chr12	-	3584	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-66	-5	-66	5	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGGTTTTCATTTATT	NA	False	NA	3	True	TATAAA	-24	NA	3360035	3297422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.20	chr12	-	1465	6	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	48	-1992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	542.615738806017	952	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGTGGGATTTTCTGT	NA	False	NA	-5	True	AATAAA	-27	NA	3359921	3299419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3306998_3314688_3314750_3359291
ES.7100.21	chr12	-	1328	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	34	2151	34	-2151	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGTGAGTTCATTT	NA	False	NA	-11	True	NA	NA	NA	3359935	3299578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.22	chr12	-	1288	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	-45	2270	-45	-2270	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTTTCTCATCTT	NA	False	NA	-1	True	AATAAA	-30	NA	3360014	3299697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ES.7100.23	chr12	-	1060	5	NIC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	37	-2277	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	580.870252293918	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGATATTTTTGTTTC	NA	False	NA	-8	True	AATAAA	-23	NA	3359932	3299704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_3299871_3302611_3302714_3303268_3303359_3314688_3314750_3359291
ES.7100.24	chr12	-	6366	3	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	19	-10209	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	657	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCACATGCTTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	3359950	3307636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3313283_3314688_3314750_3359291
ES.7100.25	chr12	-	3993	2	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	34	-40507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGATAACGTTTTTCT	NA	False	NA	NA	False	ACTAAA	-2	NA	3359935	3337934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3341284_3359291
ES.7100.3	chr12	-	3472	5	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	20	-2	intron_retention	FALSE	canonical	0	0	junction_4	591.96932986431	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTGGTTTGGTTTTC	NA	False	NA	-4	True	TATAAA	-17	NA	3359949	3297429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307048_3359291
ES.7100.6	chr12	-	3570	6	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	-39	-3	intron_retention	FALSE	canonical	1	1	junction_5	555.423081983455	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTGTGGTTTGGTTTT	NA	False	NA	-5	True	TATAAA	-16	NA	3360008	3297430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314771_3359291
ES.7100.7	chr12	-	3538	7	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	43	-4	intron_retention	FALSE	canonical	0	0	junction_6	653.431625259207	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGTGTGGTTTGGTTT	NA	False	NA	-6	True	TATAAA	-15	NA	3359926	3297431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3342097_3342170_3359291
ES.7100.8	chr12	-	3469	6	NNC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	34	-4	intron_retention	FALSE	canonical	1	5	junction_5	553.831526729925	972	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTGTGTGGTTTGGTTT	NA	False	NA	-6	True	TATAAA	-15	NA	3359935	3297431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314744_3359291
ES.7101.1	chr12	+	1753	2	Intergenic	novelGene_5753	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAATGAATAATGCTG	646	False	NA	NA	False	NA	NA	NA	3366041	3373628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3367299_3373132
ES.7102.1	chr12	-	4045	1	Intergenic	novelGene_5754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTCTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	3384923	3380878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3380900_3384900
ES.7103.1	chr12	+	4439	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-76	2428	-18	2	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGACCTTTATTTT	NA	False	NA	6	True	AGTAAA	-21	NA	3415113	3454066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.10	chr12	+	6003	9	NNC	ENSMUSG00000020668.11	novel	6791	8	NA	NA	125	-227	intron_retention	FALSE	canonical	0	0	junction_8	21.1127923307174	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCTTGTCACTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	3415314	3456267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788_3452832_3453267
ES.7103.11	chr12	+	3301	8	NNC	ENSMUSG00000020668.11	novel	6791	8	NA	NA	136	3	intron_retention	FALSE	canonical	0	0	junction_5	20.7462807092092	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGCCTCCTGTTCTCTT	NA	False	NA	NA	False	NA	NA	NA	3415325	3453142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440553_3451682_3451792_3452433_3452607_3452788
ES.7103.12	chr12	+	3944	9	NNC	ENSMUSG00000020668.11	novel	6791	8	NA	NA	138	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	21.1127923307174	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATTTTCATTGACCTTT	NA	False	NA	1	True	AGTAAA	-16	NA	3415327	3454061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3416999_3417274_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.13	chr12	+	1963	7	NNC	ENSMUSG00000020668.11	novel	645	2	NA	NA	291	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.2426810463471	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3437671	3454064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3437718_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.14	chr12	+	1915	6	ISM	ENSMUSG00000020668.11	ENSMUST00000219895.2	2962	8	748	877	748	-8	3prime_fragment	FALSE	canonical	3	43	junction_1	11.2071405808975	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAATTTTCATTGA	NA	False	NA	-4	True	AGTAAA	-11	NA	3438128	3454056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.15	chr12	+	1869	6	NNC	ENSMUSG00000020668.11	novel	6791	8	NA	NA	748	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.447986167868	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAATTTTCATTGA	NA	False	NA	-4	True	AGTAAA	-11	NA	3438128	3454056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3438258_3439622_3439742_3440437_3440555_3451682_3451746_3452433_3452607_3452788
ES.7103.16	chr12	+	154	1	Intergenic	novelGene_5755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	780	False	NA	NA	False	NA	NA	NA	3439136	3439290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3439100_3439300
ES.7103.17	chr12	+	6415	2	FSM	ENSMUSG00000020668.11	ENSMUST00000217891.2	645	2	-2171	-3599	-192	-5	multi-exon	FALSE	canonical	3	72	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGAGTCGCTTGCCTGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	3449892	3456489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3452607_3452788
ES.7103.2	chr12	+	4390	8	NNC	ENSMUSG00000020668.11	novel	4144	9	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_6	22.5560526290413	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415114	3454064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451746_3452433_3452607_3452788
ES.7103.3	chr12	+	6677	9	NNC	ENSMUSG00000020668.11	novel	4144	9	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.859275514744	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGAGTCGCTTGCCTG	NA	False	NA	NA	False	AATAAA	-13	NA	3415134	3456486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3415497_3415657_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.4	chr12	+	4166	9	NNC	ENSMUSG00000020668.11	novel	4144	9	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_8	21.1127923307174	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415150	3454064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788_3452935_3453168
ES.7103.5	chr12	+	4125	9	FSM	ENSMUSG00000020668.11	ENSMUST00000220210.2	4144	9	19	0	19	0	multi-exon	FALSE	canonical	3	5	junction_1	19.8679232684244	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415150	3454064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.6	chr12	+	5257	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-27	1561	-27	0	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACCCAGTCCTAGCT	NA	False	NA	NA	False	AATAAA	-24	NA	3415162	3454933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.7	chr12	+	3856	10	NNC	ENSMUSG00000020668.11	novel	4144	9	NA	NA	-12	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	23.2129167958884	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAATTTTCATTGA	NA	False	NA	-4	True	AGTAAA	-11	NA	3415177	3454056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788_3452935_3453168
ES.7103.8	chr12	+	4186	9	NNC	ENSMUSG00000020668.11	novel	4144	9	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.859275514744	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCATTGACCTTTAT	NA	False	NA	3	True	AGTAAA	-18	NA	3415202	3454063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3415497_3415657_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7103.9	chr12	+	6771	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	13	7	13	-7	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGAGTCGCTTGCCTGC	NA	False	NA	NA	False	AATAAA	-14	NA	3415202	3456487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ES.7104.1	chr12	+	171	1	Intergenic	novelGene_5756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGTTTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	3473565	3473736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3473600_3473700
ES.7105.1	chr12	+	2450	12	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.423157211977	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476784	3547061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492561_3501661_3501771_3505546_3505641_3507065_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.10	chr12	+	6161	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-5	2	intron_retention	FALSE	non_canonical	0	0	junction_2	33.3161663783329	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGACATTAATCAGGAAT	NA	False	NA	16	True	AATAAA	-15	NA	3476851	3552468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3505546_3505641_3507065_3507210_3519477_3519594_3524489_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.11	chr12	+	3934	11	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	-3	1642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8989539520038	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGACTTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	3476853	3548703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.12	chr12	+	2287	11	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8989539520038	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476858	3547061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.13	chr12	+	4713	13	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	32.2098156191901	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTAATCAGGAATACA	NA	False	NA	19	True	AATAAA	-18	NA	3476890	3552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3505546_3505641_3507065_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.14	chr12	+	2607	13	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.6787858759438	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476890	3547061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3505546_3505641_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.17	chr12	+	4907	13	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-5	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.2117574562584	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATCAGGAATACAGAATG	NA	False	NA	24	True	AATAAA	-23	NA	3476895	3552476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3526922_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.18	chr12	+	1232	8	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	1	-13816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.7699298676397	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	3476901	3532468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3532276
ES.7105.2	chr12	+	4527	13	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-63	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.7022053413836	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATGCAGGTCTTCAC	NA	False	NA	35	True	AATAAA	-34	NA	3476793	3552487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3476910_3492473_3492562_3501661_3501771_3505546_3505641_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.21	chr12	+	8908	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.1272782136386	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATCTTGTAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	3476905	3556846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526100_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.23	chr12	+	2335	12	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	33.4876318601854	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476906	3547061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519299_3519396_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.24	chr12	+	4464	11	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-3	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.4416371827383	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAATCAGGAATACAGAA	NA	False	NA	22	True	AATAAA	-21	NA	3476908	3552474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.25	chr12	+	5499	11	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-1	1045	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.4416371827383	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTCCTTTTGATTTT	NA	False	NA	NA	False	AATATA	-21	NA	3476910	3553511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.26	chr12	+	9232	13	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	29.2730203809279	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTTGTAGTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	3476910	3556847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492557_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.28	chr12	+	3648	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-1	-950	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATGATCGATTTTGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	3476910	3551516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.29	chr12	+	4809	13	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.9338705896756	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTAATCAGGAATACAG	NA	False	NA	20	True	AATAAA	-19	NA	3476911	3552472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3519299_3519396_3519477_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.3	chr12	+	4733	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-62	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGAATGCAGGTCTTC	NA	False	NA	33	True	AATAAA	-32	NA	3476794	3552485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.30	chr12	+	2085	10	NNC	ENSMUSG00000037486.19	novel	11934	11	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	30.539996038387	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGCTTTCCTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	3476915	3547060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.31	chr12	+	9770	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	6	793	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGAGTGCTGTAAAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	3476917	3557645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.32	chr12	+	4488	12	NNC	ENSMUSG00000037486.19	novel	1197	11	NA	NA	705	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.4481675818252	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAATGCAGGTCTTCAC	NA	False	NA	35	True	AATAAA	-34	NA	3477616	3552487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477788_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.33	chr12	+	8628	11	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-33	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9759884689275	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTTTTCATTTTATT	NA	False	NA	NA	False	AATAAA	-29	NA	3492472	3556797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.34	chr12	+	5473	13	NNC	ENSMUSG00000037486.19	novel	4462	12	NA	NA	2041	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.8964560305827	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTAATCAGGAATACA	NA	False	NA	19	True	AATAAA	-18	NA	3494546	3552471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3495455_3501661_3501771_3505546_3505641_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.35	chr12	+	8622	11	NIC	ENSMUSG00000037486.19	novel	1197	11	NA	NA	9154	-63	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	29.0351511103352	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTATTCATATATTAT	5288	False	NA	NA	False	AATAAA	-16	NA	3501659	3556784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3501771_3505546_3505641_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.36	chr12	+	8481	9	NIC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	14555	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	13.1190462686889	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTTGTAGTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	3507060	3556847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.37	chr12	+	4172	9	NIC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	14615	132	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	13.1190462686889	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTTTGTTTTAACATT	NA	False	NA	NA	False	NA	NA	NA	3507120	3552598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.38	chr12	+	6464	8	NIC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-7676	18	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	13.2849462143573	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAGAATGCAGGTCTT	NA	False	NA	32	True	AATAAA	-31	NA	3516982	3552484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.39	chr12	+	5056	10	NNC	ENSMUSG00000037486.19	novel	2715	5	NA	NA	-6145	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	34.8651724061933	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTAATCAGGAATACAGA	NA	False	NA	21	True	AATAAA	-20	NA	3518513	3552473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3518601_3518724_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.4	chr12	+	3251	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-37	-1438	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCACTGACTACAAAAGA	NA	False	NA	NA	False	AATGAA	-5	NA	3476819	3551028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.40	chr12	+	5705	4	ISM	ENSMUSG00000037486.19	ENSMUST00000111215.10	8887	12	62778	2081	-4126	18	3prime_fragment	FALSE	canonical	3	44	junction_3	20.0720922897661	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGCCAGGATTCTGCTC	NA	False	NA	NA	False	NA	NA	NA	3539634	3554766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.41	chr12	+	2442	5	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-4092	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.8216066083028	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGAATACAGAATGCA	NA	False	NA	26	True	AATAAA	-25	NA	3539668	3552478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3539734_3543733_3543840_3546224_3546937_3549978_3550712_3551652
ES.7105.42	chr12	+	3310	3	FSM	ENSMUSG00000037486.19	ENSMUST00000152196.2	5561	3	-29	2280	-29	2	multi-exon	FALSE	canonical	3	44	junction_2	20.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGACATTAATCAGGAAT	NA	False	NA	16	True	AATAAA	-15	NA	3543731	3552468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3543840_3546224_3546937_3549978
ES.7105.43	chr12	+	4213	1	Intergenic	novelGene_5760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3557568	3561781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3557600_3561800
ES.7105.5	chr12	+	2178	10	NNC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	31.6719293872525	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476819	3547061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ES.7105.6	chr12	+	8921	11	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.4416371827383	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTAGTTTTTGATGAAT	NA	False	NA	NA	False	NA	NA	NA	3476829	3556852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.7	chr12	+	9076	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-21	17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGGAGATCTAACATCT	NA	False	NA	NA	False	NA	NA	NA	3476835	3556869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.8	chr12	+	9395	14	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.1379361404881	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAATCTTGTAGTT	NA	False	NA	NA	False	NA	NA	NA	3476843	3556842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519299_3519396_3519477_3519594_3524489_3524614_3526025_3526170_3526948_3527207_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7105.9	chr12	+	6959	12	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-7	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.8760573734961	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGCCAGGATTCTGCTC	NA	False	NA	NA	False	NA	NA	NA	3476849	3554766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ES.7106.1	chr12	+	174	1	Intergenic	novelGene_5762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTAGTAAAATT	NA	False	NA	NA	False	NA	NA	NA	3570335	3570509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3570300_3570500
ES.7107.1	chr12	+	196	1	Intergenic	novelGene_5763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACATACCCATTGTGTC	NA	False	NA	NA	False	NA	NA	NA	3588429	3588625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3588400_3588600
ES.7108.1	chr12	+	256	1	Intergenic	novelGene_5765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3604045	3604301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3604000_3604300
ES.7108.2	chr12	+	152	1	Intergenic	novelGene_5766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATATTTTA	NA	False	NA	NA	False	NA	NA	NA	3604048	3604200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3604000_3604200
ES.7109.1	chr12	-	3370	3	FSM	ENSMUSG00000112308.2_ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-15	-1432	-8	0	multi-exon	FALSE	canonical	3	62	junction_1	5.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCTGGGTTTGTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	3476755	3453877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457643_3457925_3476500
ES.7109.10	chr12	-	4096	1	NIC	ENSMUSG00000071456.7	novel	3569	3	NA	NA	72	-15323	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	3476642	3472546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_3472500_3476600
ES.7109.11	chr12	-	1647	1	Genic_Genomic	ENSMUSG00000071456.7	novel	NA	NA	NA	NA	-693	-18834	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGTTTAGAAATCG	NA	False	NA	NA	False	NA	NA	NA	3477704	3476057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_3476100_3477700
ES.7109.2	chr12	-	3270	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	294	5	-3	-5	multi-exon	FALSE	canonical	3	14	junction_1	29.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTGGGCCTGGGTTTG	NA	False	NA	NA	False	AGTAAA	-14	NA	3476717	3453882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457700_3457925_3476500
ES.7109.3	chr12	-	3187	3	FSM	ENSMUSG00000112308.2_ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-11	-1253	-4	-179	multi-exon	FALSE	canonical	3	62	junction_1	5.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGAAATTTACTTATC	NA	False	NA	NA	False	AATAAA	-23	NA	3476751	3454056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457643_3457925_3476500
ES.7109.4	chr12	-	3999	2	FSM	ENSMUSG00000071456.7	ENSMUST00000180149.2	948	2	106	-3157	73	-189	multi-exon	FALSE	canonical	3	73	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACTTTTTAAAATAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	3476641	3454066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3457925_3476500
ES.7109.5	chr12	-	3050	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	260	259	-4	-259	multi-exon	FALSE	canonical	3	14	junction_1	29.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	3476751	3454136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457700_3457925_3476500
ES.7109.6	chr12	-	1902	3	FSM	ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	27	-6	1	6	multi-exon	FALSE	canonical	3	62	junction_1	5.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTAAGTGCTGACAGC	NA	False	NA	NA	False	AATAAA	-17	NA	3476713	3455303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457643_3457925_3476500
ES.7109.7	chr12	-	1853	1	NIC	ENSMUSG00000071456.7	novel	3569	3	NA	NA	18660	504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTTTGTCAATCAAATG	NA	False	NA	NA	False	ATTAAA	-43	NA	3458054	3456201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_3456200_3458100
ES.7109.8	chr12	-	935	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	284	2350	-13	478	multi-exon	FALSE	canonical	3	14	junction_1	29.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAATTTGATCCTAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	3476727	3456227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_3456712_3457700_3457925_3476500
ES.7109.9	chr12	-	1100	4	NNC	ENSMUSG00000071456.7	novel	3569	3	NA	NA	-17	478	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.37704215656966	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAATTTGATCCTAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	3476764	3456227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_3456712_3457700_3457925_3461684_3461813_3476500
ES.711.1	chr1	-	699	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAAACGACTGGGA	NA	False	NA	NA	False	NA	NA	NA	72417052	72416353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72416400_72417100
ES.7110.1	chr12	-	179	1	Intergenic	novelGene_5757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACTCAAGA	NA	False	NA	NA	False	NA	NA	NA	3485053	3484874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3484900_3485100
ES.7111.1	chr12	-	178	1	Intergenic	novelGene_5758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGGTTTC	NA	False	NA	NA	False	NA	NA	NA	3542550	3542372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3542400_3542600
ES.7111.2	chr12	-	157	2	Intergenic	novelGene_5759	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	3606113	3542390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3542530_3606095
ES.7111.3	chr12	-	1483	1	Antisense	novelGene_ENSMUSG00000037486.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAACCAAAAGAAACAACA	NA	False	NA	NA	False	NA	NA	NA	3549140	3547657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3547700_3549100
ES.7111.4	chr12	-	209	1	Intergenic	novelGene_5761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGGAAGTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3567766	3567557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3567600_3567800
ES.7111.5	chr12	-	2264	2	Intergenic	novelGene_5764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGGTGAATGTGGCT	NA	False	NA	NA	False	AGTAAA	-7	NA	3608076	3601822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3603951_3607940
ES.7112.1	chr12	+	204	1	Intergenic	novelGene_5767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGACACAAAACAGTCTT	NA	False	NA	NA	False	NA	NA	NA	3619692	3619896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3619700_3619900
ES.7113.1	chr12	+	2428	19	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622352	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.10	chr12	+	3780	19	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	5	1022	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTTTCTAAGTTCTGT	NA	False	NA	NA	False	TATAAA	-18	NA	3622421	3832818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.11	chr12	+	1737	10	NNC	ENSMUSG00000071454.14	novel	1629	9	NA	NA	5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	179.097118284404	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTGTTTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3622421	3713249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3630232_3630290_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3712672
ES.7113.12	chr12	+	2208	18	NNC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.556473458627	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622423	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3736719_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.13	chr12	+	2398	21	FSM	ENSMUSG00000071454.14	ENSMUST00000101637.11	2428	21	-99	129	7	-15	multi-exon	FALSE	canonical	0	0	junction_4	122.213706268978	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3622423	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.14	chr12	+	2372	20	FSM	ENSMUSG00000071454.14	ENSMUST00000173199.8	2820	20	49	399	-3	0	multi-exon	FALSE	canonical	0	0	junction_4	121.930910004004	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622429	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.15	chr12	+	3308	19	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	110.241933721326	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622429	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646846_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768494_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.16	chr12	+	2294	19	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	130.781895998596	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGAGCCTGTGTGTGTT	NA	False	NA	20	True	NA	NA	NA	3622429	3831391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799471_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.18	chr12	+	3173	18	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-1	-15	intron_retention	FALSE	canonical	0	0	junction_4	114.610367472493	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3622431	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.19	chr12	+	2342	19	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	110.30385921637	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622432	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831111
ES.7113.2	chr12	+	2570	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	-67	-113	-15	6	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGAAAGCTGCAGGCCT	NA	False	NA	NA	False	NA	NA	NA	3622365	3831511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.20	chr12	+	2396	20	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.980840677129	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622433	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782716_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.21	chr12	+	2419	21	FSM	ENSMUSG00000071454.14	ENSMUST00000174663.8	2381	21	-36	-2	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.390581410285	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622433	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3826058_3826110_3829618_3829655_3831105
ES.7113.23	chr12	+	3316	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	86.5031398844952	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622434	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.24	chr12	+	2403	20	NNC	ENSMUSG00000071454.14	novel	2381	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	124.983034859816	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622434	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3826058_3826116_3829618_3829655_3831105
ES.7113.26	chr12	+	2716	10	NIC	ENSMUSG00000071454.14	novel	2355	18	NA	NA	1	13077	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	147.879914578696	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3622435	3784166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3768411_3768490_3782617
ES.7113.27	chr12	+	4820	19	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_4	108.799410514924	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622435	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3826116_3829618_3829655_3831105
ES.7113.28	chr12	+	2275	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	113.906299482199	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622438	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.29	chr12	+	843	4	ISM	ENSMUSG00000071454.14	ENSMUST00000174479.8	3689	7	8	49651	7	284	5prime_fragment	FALSE	canonical	3	363	junction_1	6.94422221866655	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTCTACTCTGTAAC	NA	False	NA	NA	False	AAGAAA	-11	NA	3622441	3647136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648
ES.7113.3	chr12	+	2435	19	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	112.42325228493	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622387	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824646_3831103
ES.7113.31	chr12	+	2349	20	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-8	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	111.959851331847	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3622444	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646862_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831111
ES.7113.32	chr12	+	3899	10	ISM	ENSMUSG00000071454.14	ENSMUST00000173240.8	2218	19	-8	60290	-8	16	5prime_fragment	FALSE	canonical	0	0	junction_4	112.087708161902	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTCAGAACTCAGCAC	NA	False	NA	NA	False	NA	NA	NA	3622444	3771105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411
ES.7113.34	chr12	+	2239	18	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	111.291381635316	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622451	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3829618_3829655_3831105
ES.7113.35	chr12	+	3203	18	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_4	113.112400844971	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGAGCCTGTGTGTGTT	NA	False	NA	20	True	NA	NA	NA	3622451	3831391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.36	chr12	+	3450	20	NNC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	126.077626353909	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622451	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3623509_3623663_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.37	chr12	+	8304	18	NIC	ENSMUSG00000071454.14	novel	2381	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	82.9471837624259	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622452	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3829655_3831105
ES.7113.38	chr12	+	2791	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	21	-422	1	24	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTGATTTTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	3622453	3831820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.39	chr12	+	1639	9	FSM	ENSMUSG00000071454.14	ENSMUST00000173524.8	1629	9	-12	2	1	-2	multi-exon	FALSE	canonical	0	0	junction_4	156.038807272422	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGTGATTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	3622453	3713240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3712672
ES.7113.4	chr12	+	2394	19	NNC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	110.451039373858	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622400	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831091
ES.7113.40	chr12	+	1272	7	NNC	ENSMUSG00000071454.14	novel	3689	7	NA	NA	3	-2392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.690051079882	333	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTAGTTCTGGGCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	3622455	3694395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693919
ES.7113.41	chr12	+	2259	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	3	-15	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	92.3351383698415	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3622455	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.42	chr12	+	2364	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	23	3	3	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622455	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.43	chr12	+	2440	19	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	4	8	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCTGCAGGCCTCA	NA	False	NA	NA	False	NA	NA	NA	3622456	3831513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.44	chr12	+	2280	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	111.448280093515	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622458	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.45	chr12	+	2293	19	NNC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	110.616733491796	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3622460	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682815_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.46	chr12	+	4428	3	ISM	ENSMUSG00000071454.14	ENSMUST00000174479.8	3689	7	28	50708	-1	-773	5prime_fragment	FALSE	canonical	3	363	junction_1	8.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3622461	3646079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3622648_3639170_3639239_3641905
ES.7113.47	chr12	+	2443	21	NNC	ENSMUSG00000071454.14	novel	2381	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	135.497933563579	366	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622478	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3803807_3803928_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.48	chr12	+	1488	11	NNC	ENSMUSG00000071454.14	novel	2355	18	NA	NA	10	-5973	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	163.427200918329	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAACATTACA	NA	False	NA	NA	False	NA	NA	NA	3622484	3762995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736867_3756765_3756803_3762713
ES.7113.49	chr12	+	4534	20	NIC	ENSMUSG00000071454.14	novel	2428	21	NA	NA	20	0	intron_retention	FALSE	canonical	0	0	junction_4	110.077182692802	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622494	3831395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3804117_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7113.5	chr12	+	2724	1	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	11	-21727	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTCTCTGGCACTT	NA	False	NA	NA	False	NA	NA	NA	3622401	3625125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622400_3625100
ES.7113.51	chr12	+	3587	7	FSM	ENSMUSG00000071454.14	ENSMUST00000174479.8	3689	7	107	-5	5	5	multi-exon	FALSE	canonical	0	0	junction_4	135.946067737663	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGTTTATATGTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	3622540	3696792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916
ES.7113.53	chr12	+	2313	19	NNC	ENSMUSG00000071454.14	novel	2112	19	NA	NA	105	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	108.167808017719	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622724	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622905_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.54	chr12	+	1191	7	NNC	ENSMUSG00000071454.14	novel	2112	19	NA	NA	178	-2391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	168.805279011713	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTAGTTCTGGGCCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	3622797	3694396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622905_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916
ES.7113.55	chr12	+	2440	19	FSM	ENSMUSG00000071454.14	ENSMUST00000077930.13	2376	19	-64	0	-64	0	multi-exon	FALSE	canonical	0	0	junction_4	109.914009599199	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGAGCCTGTGTGTGTT	NA	False	NA	20	True	NA	NA	NA	3622919	3831391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3623233_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.56	chr12	+	3160	20	NNC	ENSMUSG00000071454.14	novel	2428	21	NA	NA	36	-15	intron_retention	FALSE	canonical	0	0	junction_3	147.240696530142	358	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAACAGAAAAAGCCCT	NA	False	NA	5	True	NA	NA	NA	3639207	3831376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3774920_3775015_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.57	chr12	+	2670	15	NNC	ENSMUSG00000071454.14	novel	1585	14	NA	NA	17298	0	intron_retention	FALSE	canonical	0	0	junction_1	117.547211531263	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3656469	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3656506_3667605_3667692_3682809_3682965_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
ES.7113.58	chr12	+	634	1	Intergenic	novelGene_5775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTATACT	NA	False	NA	NA	False	NA	NA	NA	3690247	3690881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3690200_3690900
ES.7113.59	chr12	+	186	1	Intergenic	novelGene_5776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3697262	3697448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3697300_3697400
ES.7113.6	chr12	+	2279	18	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.136872618653	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622411	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.60	chr12	+	5614	1	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	9033	13097	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCTATATTTGTGAAGC	NA	False	NA	NA	False	NA	NA	NA	3778572	3784186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3778600_3784200
ES.7113.61	chr12	+	865	7	ISM	ENSMUSG00000071454.14	ENSMUST00000077930.13	2376	19	175440	5	-865	-5	3prime_fragment	FALSE	canonical	3	200	junction_5	53.3249993488566	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCCTGAGCCTGTGT	NA	False	NA	15	True	NA	NA	NA	3798423	3831386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.7	chr12	+	2291	18	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	114.055956642671	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTGTGTTCCTTCC	NA	False	NA	26	True	AAAAAG	-6	NA	3622411	3831397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ES.7113.9	chr12	+	2442	21	NNC	ENSMUSG00000071454.14	novel	2428	21	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.281722529665	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTTCCTTCCGG	NA	False	NA	28	True	AAAAAG	-8	NA	3622420	3831399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3622648_3623289_3623329_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ES.7114.1	chr12	-	184	1	Intergenic	novelGene_5768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAGTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3632335	3632151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3632200_3632300
ES.7115.1	chr12	-	220	1	Intergenic	novelGene_5769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	72	False	NA	NA	False	AAAAAG	-23	NA	3646323	3646103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3646100_3646300
ES.7116.1	chr12	-	175	1	Intergenic	novelGene_5770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	3649547	3649372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3649400_3649500
ES.7117.1	chr12	-	175	1	Intergenic	novelGene_5771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAACTAAACA	NA	False	NA	NA	False	NA	NA	NA	3650879	3650704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3650700_3650900
ES.7118.1	chr12	-	175	1	Intergenic	novelGene_5772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGTGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	3664024	3663849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3663800_3664000
ES.7119.1	chr12	-	1304	1	Intergenic	novelGene_5773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAGAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3669667	3668363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3668400_3669700
ES.712.1	chr1	-	2776	4	FSM	ENSMUSG00000039372.6	ENSMUST00000047786.6	4553	4	1776	1	1776	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCATGTCTCTTTCCCGGG	4658	False	NA	NA	False	NA	NA	NA	72574313	72466271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72468169_72486314_72486508_72491600_72491757_72573783
ES.7120.1	chr12	-	182	1	Intergenic	novelGene_5774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAATCTACTTTTAAA	9359	False	NA	NA	False	NA	NA	NA	3681797	3681615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3681600_3681800
ES.7121.1	chr12	-	157	1	Antisense	novelGene_ENSMUSG00000071454.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	3695969	3695812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3695800_3696000
ES.7122.1	chr12	-	177	1	Intergenic	novelGene_5777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAGATA	NA	False	NA	NA	False	NA	NA	NA	3757035	3756858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3756900_3757000
ES.7123.1	chr12	-	178	1	Antisense	novelGene_ENSMUSG00000071454.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATATAGGCAGT	NA	False	NA	NA	False	NA	NA	NA	3770045	3769867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3769900_3770000
ES.7124.1	chr12	-	152	1	Intergenic	novelGene_5778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGGCTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	3799043	3798891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3798900_3799000
ES.7125.1	chr12	-	2410	1	Intergenic	novelGene_5779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATATGTACGCTAAGGC	NA	False	NA	NA	False	NA	NA	NA	3809975	3807565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3807600_3810000
ES.7126.1	chr12	+	178	1	Intergenic	novelGene_5780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAACAACAGAG	5671	False	NA	NA	False	NA	NA	NA	3840567	3840745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3840600_3840700
ES.7127.1	chr12	-	175	1	Intergenic	novelGene_5781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	3842789	3842614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_3842600_3842800
ES.7128.1	chr12	+	4375	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	27	628	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTTAAGATTTTCT	150	False	NA	NA	False	NA	NA	NA	3856553	3959175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.10	chr12	+	4301	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-62	5446	-62	450	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCTGTCTAAGT	564	False	NA	9	True	AATAAA	-18	NA	3856967	3958997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.11	chr12	+	4468	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-55	5272	-55	624	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATAATTGTTTTAAGATT	571	False	NA	NA	False	NA	NA	NA	3856974	3959171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.12	chr12	+	3836	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-40	5889	-40	7	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCGACTTCATAATGG	586	False	NA	2	True	NA	NA	NA	3856989	3958554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.13	chr12	+	1974	4	ISM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-25	46940	-25	19	5prime_fragment	FALSE	canonical	3	48	junction_1	9.0921211313239	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTTGTTTCTGGCCTCC	601	False	NA	NA	False	NA	NA	NA	3857004	3917503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984
ES.7128.15	chr12	+	3439	23	NNC	ENSMUSG00000020661.16	novel	9685	23	NA	NA	5	317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.0635914317454	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTTTTTTTTTCCTT	631	False	NA	4	True	TATAAA	-13	NA	3857034	3958204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3857121_3885030_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946151_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.18	chr12	+	4598	20	NIC	ENSMUSG00000020661.16	novel	9685	23	NA	NA	-5	8	intron_retention	FALSE	canonical	2	37	junction_5	36.7886830725981	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCGACTTCATAATGGT	649	False	NA	3	True	NA	NA	NA	3857052	3958555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.2	chr12	+	4213	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	27	466	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTTTGTGTGTTC	150	False	NA	25	True	AATAAA	-34	NA	3856553	3959013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.21	chr12	+	200	1	Intergenic	novelGene_5782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTTTTTTTAAGCC	4071	False	NA	NA	False	NA	NA	NA	3877241	3877441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3877200_3877400
ES.7128.22	chr12	+	9687	23	NNC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	-15579	-4	intron_retention	FALSE	canonical	0	0	junction_1	39.4970445593796	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCCTTTTTTGTATTTTT	NA	False	NA	2	True	NA	NA	NA	3884055	3964439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3884153_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.23	chr12	+	8509	23	NNC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	-15499	-150	intron_retention	FALSE	canonical	0	0	junction_1	39.4970445593796	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGGTGTAGAGAGTCC	NA	False	NA	4	True	ATTAAA	-13	NA	3884135	3963341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3884153_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.25	chr12	+	8306	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	4814	-14	intron_retention	FALSE	canonical	1	4	junction_1	36.7627717268645	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAACGGAAAAAA	7600	False	NA	140	True	AATAAA	-17	NA	3921004	3963477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3921290_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.26	chr12	+	3808	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	4831	449	intron_retention	FALSE	canonical	1	4	junction_1	36.7627717268645	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGCTTTCTGTCTAAG	7617	False	NA	8	True	AATAAA	-17	NA	3921021	3958996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3921290_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.27	chr12	+	9206	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	4878	-2	intron_retention	FALSE	canonical	1	4	junction_1	36.7627717268645	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTTTTGTATTTTTTT	7664	False	NA	4	True	NA	NA	NA	3921068	3964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3921290_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.28	chr12	+	2400	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	5155	-63	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3915421428792	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTTAAACAAACAAA	7941	False	NA	NA	False	NA	NA	NA	3921345	3957779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3921423_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.29	chr12	+	5041	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	6334	1770	intron_retention	FALSE	canonical	0	0	junction_1	37.3915421428792	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGGACAGTGAACC	9120	False	NA	NA	False	AATAAA	-16	NA	3922524	3960317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3922705_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.3	chr12	+	3745	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	36	7	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCGACTTCATAATGG	159	False	NA	2	True	NA	NA	NA	3856562	3958554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.30	chr12	+	3273	20	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	6339	7	intron_retention	FALSE	canonical	0	0	junction_1	37.3915421428792	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCGACTTCATAATGG	9125	False	NA	2	True	NA	NA	NA	3922529	3958554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3922705_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.31	chr12	+	3157	18	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	7341	6	intron_retention	FALSE	canonical	0	0	junction_1	32.5409510434113	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCCCGACTTCATAATG	NA	False	NA	1	True	NA	NA	NA	3923531	3958553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3923783_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.32	chr12	+	3450	18	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	7602	426	intron_retention	FALSE	canonical	0	0	junction_1	32.5409510434113	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACATACAAAA	NA	False	NA	-15	True	NA	NA	NA	3923792	3958973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3923917_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.33	chr12	+	2427	18	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	-219	-63	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.3246935507328	223	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTTAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	3935229	3957779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3935525_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.34	chr12	+	3131	18	NNC	ENSMUSG00000020661.16	novel	502	6	NA	NA	1420	6	intron_retention	FALSE	canonical	0	0	junction_1	32.5409510434113	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCCCGACTTCATAATG	NA	False	NA	1	True	NA	NA	NA	3936868	3958553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_3937094_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.35	chr12	+	2990	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	50	-712	34	7	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCCGACTTCATAATGG	NA	False	NA	2	True	NA	NA	NA	3941777	3958554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.36	chr12	+	3437	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	50	-1159	34	454	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTGTCTAAGTTGCC	NA	False	NA	13	True	AATAAA	-22	NA	3941777	3959001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.37	chr12	+	2637	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	54	-363	38	318	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTTTTTTCCTTT	NA	False	NA	5	True	TATAAA	-14	NA	3941781	3958205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.38	chr12	+	4749	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	54	-2475	38	1770	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGGACAGTGAACC	NA	False	NA	NA	False	AATAAA	-16	NA	3941781	3960317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.39	chr12	+	3587	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	74	-1333	58	628	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTTTTAAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	3941801	3959175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.4	chr12	+	8530	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	39	-149	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGTGTAGAGAGTCCG	162	False	NA	5	True	ATTAAA	-14	NA	3856565	3963342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.40	chr12	+	3299	17	NIC	ENSMUSG00000020661.16	novel	2328	18	NA	NA	76	466	intron_retention	FALSE	canonical	0	0	junction_3	35.6983346075136	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTTTGTGTGTTC	NA	False	NA	25	True	AATAAA	-34	NA	3941819	3959013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3941861_3945542_3945759_3945989_3946149_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.41	chr12	+	7899	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	92	-5663	76	14	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTCATAATGTCCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	3941819	3963505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.42	chr12	+	7097	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	96	-4865	80	-784	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGCTGTCTGGACAA	NA	False	NA	NA	False	ATTAAA	-18	NA	3941823	3962707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.43	chr12	+	3073	16	NIC	ENSMUSG00000020661.16	novel	2328	18	NA	NA	81	319	intron_retention	FALSE	canonical	3	65	junction_1	20.4739400756723	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTCCTTTT	NA	False	NA	6	True	TATAAA	-15	NA	3941824	3958206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.44	chr12	+	5173	1	NIC	ENSMUSG00000020661.16	novel	9685	23	NA	NA	128	1208	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCCGGGCAGTGC	NA	False	NA	NA	False	NA	NA	NA	3945720	3950893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3945700_3950900
ES.7128.45	chr12	+	7227	15	NIC	ENSMUSG00000020661.16	novel	5424	19	NA	NA	539	-151	intron_retention	FALSE	canonical	0	0	junction_1	35.5082629072992	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGGTGTAGAGAGTC	NA	False	NA	3	True	ATTAAA	-12	NA	3946131	3963340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_3946149_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.46	chr12	+	3152	15	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	4849	-1331	-843	626	3prime_fragment	FALSE	canonical	3	107	junction_4	13.188004753857	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTTTTAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	3946576	3959173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.5	chr12	+	9757	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-74	2	-74	-2	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTTTTGTATTTTTTT	552	False	NA	4	True	NA	NA	NA	3856955	3964441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.6	chr12	+	8652	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-70	1103	-70	-151	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGGTGTAGAGAGTC	556	False	NA	3	True	ATTAAA	-12	NA	3856959	3963340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.7	chr12	+	3091	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-70	6664	-70	-63	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTTAAACAAACAAA	556	False	NA	NA	False	NA	NA	NA	3856959	3957779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.8	chr12	+	8820	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-64	929	-64	23	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCCTTTTGTCCTGCG	562	False	NA	NA	False	NA	NA	NA	3856965	3963514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7128.9	chr12	+	5646	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	-64	4103	-64	1793	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGGAGTAAAGCAAATC	562	False	NA	NA	False	AATAAA	-39	NA	3856965	3960340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ES.7129.1	chr12	-	5262	1	Antisense	novelGene_ENSMUSG00000020661.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGTGGTGGCGCACA	NA	False	NA	NA	False	AAAAAG	-39	NA	3960584	3955322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3955300_3960600
ES.7129.2	chr12	-	1383	3	Antisense	novelGene_ENSMUSG00000020661.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1902	False	NA	NA	False	AAAAAG	-10	NA	3958558	3955351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_3955661_3956762_3956882_3957603
ES.713.1	chr1	+	3104	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	-38	-7	-38	7	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTTTGTCACGCAGAAG	NA	False	NA	16	True	AATAAA	-23	NA	72622371	72672300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.11	chr1	+	761	5	ISM	ENSMUSG00000039354.17	ENSMUST00000133123.8	828	6	31	3948	31	-3948	5prime_fragment	FALSE	canonical	0	0	junction_2	41.641325627314	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTTTCTGCTTTCCTA	NA	False	NA	NA	False	AATAAA	-13	NA	72622440	72631042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72622598_72624796_72625078_72626209_72626261_72630221_72630435_72630983
ES.713.12	chr1	+	5239	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	39	-2219	39	2219	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCGTTCTACTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	72622448	72674512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.14	chr1	+	4163	16	NIC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	65	-4	intron_retention	FALSE	canonical	3	73	junction_6	9.80612053770501	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622474	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72668631_72671979
ES.713.15	chr1	+	3045	17	FSM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	-51	0	-51	0	multi-exon	FALSE	canonical	2	6	junction_1	25.2319706671913	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622722	72672293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72622897_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.16	chr1	+	3784	14	NIC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	1102	-4	intron_retention	FALSE	canonical	3	73	junction_4	11.7110174192545	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72625898	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.2	chr1	+	5910	15	NIC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	73	junction_4	11.3876499519686	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622399	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.3	chr1	+	2987	17	NNC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.105480147854	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622400	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72622598_72624873_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.4	chr1	+	5566	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	18	-2525	18	2525	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTGCCTCAGCGGCTA	NA	False	NA	NA	False	AATAAA	-23	NA	72622427	72674818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.5	chr1	+	4410	16	NIC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	18	-4	intron_retention	FALSE	canonical	3	73	junction_6	11.3834187405288	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622427	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.6	chr1	+	3681	16	NIC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	20	-4	intron_retention	FALSE	canonical	3	73	junction_5	11.120351713063	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622429	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72622598_72624796_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.713.7	chr1	+	9016	14	FSM	ENSMUSG00000039354.17	ENSMUST00000136498.8	2818	14	20	-6218	20	0	multi-exon	FALSE	canonical	3	73	junction_6	8.69128652953414	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622429	72672293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621
ES.713.9	chr1	+	2470	17	NNC	ENSMUSG00000039354.17	novel	3059	17	NA	NA	22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5895012070137	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	False	NA	5	True	AATAAA	-12	NA	72622431	72672289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72622598_72624873_72625078_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ES.7130.1	chr12	+	164	1	Intergenic	novelGene_5783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAAAG	7099	False	NA	NA	False	NA	NA	NA	3967127	3967291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_3967100_3967300
ES.7131.1	chr12	-	158	1	Intergenic	novelGene_5784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	4000639	4000481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4000500_4000600
ES.7132.1	chr12	+	644	1	Genic_Genomic	ENSMUSG00000020660.7	novel	NA	NA	NA	NA	5054	25	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACATTTCTCAACC	NA	False	NA	106	True	AAAACA	-44	NA	4010023	4010667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_4010000_4010700
ES.7133.1	chr12	-	176	1	Intergenic	novelGene_5785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGGGAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	4011338	4011162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4011200_4011300
ES.7134.1	chr12	-	6569	23	FSM	ENSMUSG00000020658.11	ENSMUST00000111178.2	6547	23	-22	0	-22	0	multi-exon	FALSE	canonical	1	2	junction_15	2.26224857056896	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTCTATTTGAATTCT	NA	False	NA	1	True	AATAAA	-20	NA	4088937	4012553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4016548_4017102_4017153_4018526_4018634_4019564_4019614_4020975_4021068_4021765_4021894_4023607_4023676_4025335_4025468_4026714_4026877_4027118_4027195_4027912_4028086_4030141_4030194_4030450_4030563_4031653_4031816_4031969_4032106_4032854_4032934_4033383_4033519_4034533_4034684_4035429_4035552_4042905_4043057_4049589_4049718_4050879_4050957_4088703
ES.7134.3	chr12	-	5704	14	NNC	ENSMUSG00000020658.11	novel	6547	23	NA	NA	361	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2.35339362165821	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGGCTGTCTATTTGAA	7444	False	NA	-3	True	AATAAA	-16	NA	4031487	4012557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4016548_4017102_4017153_4018526_4018634_4019564_4019614_4020975_4021068_4021765_4021894_4023607_4023676_4025335_4025468_4026714_4026877_4027118_4027195_4027912_4028086_4030141_4030194_4030450_4030563_4030974
ES.7135.1	chr12	+	175	1	Intergenic	novelGene_5786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAACCAGATTTGC	NA	False	NA	NA	False	NA	NA	NA	4092940	4093115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4092900_4093100
ES.7136.1	chr12	+	4404	9	FSM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-63	-1407	-17	5	multi-exon	FALSE	canonical	2	4	junction_7	12.4492720670728	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGGCTGCATTGATT	NA	False	NA	13	True	AGTAAA	-19	NA	4132565	4160611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158_4157349_4157549
ES.7136.10	chr12	+	2452	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	22	2224	22	-822	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTGTAGTCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	4132604	4158382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
ES.7136.11	chr12	+	4091	8	NNC	ENSMUSG00000020657.17	novel	2934	9	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.4883619291511	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTCTGCTGGCTGCA	NA	False	NA	7	True	AGTAAA	-13	NA	4132623	4160605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4156985_4157549
ES.7136.13	chr12	+	1167	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	50	3481	4	-2079	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTTATGCACTTCAT	NA	False	NA	NA	False	NA	NA	NA	4132632	4157125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
ES.7136.14	chr12	+	4474	6	NIC	ENSMUSG00000020657.17	novel	4698	7	NA	NA	14	-3	intron_retention	FALSE	canonical	0	0	junction_5	12.7593103261893	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGGTCTGCTGGCTG	NA	False	NA	5	True	AGTAAA	-11	NA	4132642	4160603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4156801
ES.7136.15	chr12	+	178	1	Intergenic	novelGene_5787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATTTAGAAA	1363	False	NA	NA	False	NA	NA	NA	4134877	4135055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4134900_4135100
ES.7136.16	chr12	+	175	2	Intergenic	novelGene_5788	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACCCATAACATTAAAA	1365	False	NA	NA	False	NA	NA	NA	4134879	4205047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4135035_4205027
ES.7136.17	chr12	+	178	1	Intergenic	novelGene_5789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	4151672	4151850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4151700_4151800
ES.7136.18	chr12	+	265	1	Intergenic	novelGene_5791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCCACATTTAGGGTTG	NA	False	NA	NA	False	AAGAAA	-4	NA	4175210	4175475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4175200_4175500
ES.7136.19	chr12	+	5137	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	15.3109863775942	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4182990	4263525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.2	chr12	+	4616	3	ISM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-49	15832	-3	-3000	5prime_fragment	FALSE	canonical	3	31	junction_1	2	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTAAGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4132579	4143372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4132874_4135953_4136037_4139133
ES.7136.22	chr12	+	4861	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	-16	117	-15	-116	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGCCTTGTCTTCTGA	NA	False	NA	NA	False	AAAACA	-8	NA	4183087	4263408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.23	chr12	+	5031	22	NIC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	15.5787808476277	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183099	4263525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4183779_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.26	chr12	+	4863	21	NIC	ENSMUSG00000020654.16	novel	4672	22	NA	NA	14	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.2864486788595	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183117	4263522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4183779_4184146_4185001_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.27	chr12	+	4560	23	NNC	ENSMUSG00000020654.16	novel	4728	22	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.710717812759	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183119	4263525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4183277_4183724_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.28	chr12	+	4943	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	22	-3	22	3	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGTGGCAATTCTGT	NA	False	NA	11	True	ATTAAA	-21	NA	4183125	4263528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.29	chr12	+	4667	22	NIC	ENSMUSG00000020654.16	novel	4672	22	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.0992476760751	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4183401	4263522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4183720_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.3	chr12	+	4581	8	ISM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-47	-1399	-1	-3	intron_retention	FALSE	canonical	2	4	junction_7	11.2431384971149	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGGTCTGCTGGCTG	NA	False	NA	5	True	AGTAAA	-11	NA	4132581	4160603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157044_4157158
ES.7136.31	chr12	+	2391	2	Intergenic	novelGene_5792	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTCACTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	4188587	4191027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4189709_4189757
ES.7136.32	chr12	+	3617	21	NNC	ENSMUSG00000020654.16	novel	426	3	NA	NA	12628	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	17.4885676943539	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4222227	4263525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4222344_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.33	chr12	+	3570	20	ISM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	39986	0	13783	0	3prime_fragment	FALSE	canonical	3	32	junction_13	12.3384856099448	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4223382	4263525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.34	chr12	+	2210	11	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	69360	2	245	-2	3prime_fragment	FALSE	canonical	3	41	junction_4	12.4294006291534	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGACTGTTGTGGCAA	NA	False	NA	5	True	ATTAAA	-15	NA	4253512	4263522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ES.7136.4	chr12	+	4715	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	1	-18	1	18	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTTGTTGAGACCTGA	NA	False	NA	26	True	AGTAAA	-32	NA	4132583	4160624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
ES.7136.5	chr12	+	4313	9	NNC	ENSMUSG00000020657.17	novel	2934	9	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	12.8931910324791	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGTCTGCTGGCTGCA	NA	False	NA	7	True	AGTAAA	-13	NA	4132591	4160605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4156985_4157158_4157349_4157549
ES.7136.6	chr12	+	4202	8	NIC	ENSMUSG00000020657.17	novel	2934	9	NA	NA	9	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	13.8239661753177	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCAAACACTGGTCTG	NA	False	NA	-2	True	AGTAAA	-4	NA	4132591	4160596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4156801_4157044_4157158_4157349_4157549
ES.7136.7	chr12	+	4479	8	NIC	ENSMUSG00000020657.17	novel	2934	9	NA	NA	20	2	intron_retention	FALSE	canonical	3	8	junction_7	10.0387006232919	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGCTGGCTGCATTG	NA	False	NA	10	True	AGTAAA	-16	NA	4132602	4160608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801_4157349_4157549
ES.7136.8	chr12	+	4755	7	NNC	ENSMUSG00000020657.17	novel	4698	7	NA	NA	21	3	intron_retention	FALSE	canonical	0	0	junction_4	13.4866188827626	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGCTGGCTGCATTGA	NA	False	NA	11	True	AGTAAA	-17	NA	4132603	4160609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147148_4147347_4153053_4153215_4156801
ES.7136.9	chr12	+	3968	2	ISM	ENSMUSG00000020657.17	ENSMUST00000219923.2	2934	9	-25	19553	21	-6721	intron_retention	FALSE	canonical	3	31	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCGGCCATTCTCTC	NA	False	NA	NA	False	NA	NA	NA	4132603	4139651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4132874_4135953
ES.7137.1	chr12	+	647	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	-60	3253	-60	-3253	multi-exon	FALSE	canonical	3	212	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACTACTATCATCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	4283966	4286697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4284279_4286362
ES.7137.2	chr12	+	3831	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	9	0	9	0	multi-exon	FALSE	canonical	3	212	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATTACCTAAAATAGAT	NA	False	NA	NA	False	AATAAA	-28	NA	4284035	4289950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4284279_4286362
ES.7137.3	chr12	+	3992	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	17	-169	17	169	multi-exon	FALSE	canonical	3	212	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTGAGGATTGGTC	NA	False	NA	NA	False	NA	NA	NA	4284043	4290119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4284279_4286362
ES.7137.4	chr12	+	624	1	NIC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	89	-5211	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4284115	4284739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4284100_4284700
ES.7137.5	chr12	+	670	2	NNC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	340	-3249	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTATCATCATTATCAT	NA	False	NA	NA	False	ATTAAA	-21	NA	4284366	4286701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4284698_4286362
ES.7137.6	chr12	+	3884	2	NNC	ENSMUSG00000096199.3	novel	3840	2	NA	NA	375	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATTACCTAAAATAGAT	NA	False	NA	NA	False	AATAAA	-28	NA	4284401	4289950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4284698_4286362
ES.7138.1	chr12	-	183	1	Intergenic	novelGene_5790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGC	NA	False	NA	NA	False	NA	NA	NA	4165590	4165407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4165400_4165600
ES.7139.1	chr12	-	4545	1	Genic_Genomic	ENSMUSG00000020652.18	novel	NA	NA	NA	NA	16538	580	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4249968	4245423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4245400_4250000
ES.714.1	chr1	+	169	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72676138	72676307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72676100_72676300
ES.7140.1	chr12	-	8268	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	329	-4249	0	4249	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCAGGGTCTGCTCTA	NA	False	NA	NA	False	NA	NA	NA	4283965	4257417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ES.7140.10	chr12	-	1964	3	ISM	ENSMUSG00000020652.18	ENSMUST00000126017.2	1683	5	7	14334	7	-14334	5prime_fragment	FALSE	canonical	3	46	junction_2	6	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGTGCGTGTGCCCAT	NA	False	NA	NA	False	ATTAAA	-33	NA	4283931	4280025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4281683_4283530_4283658_4283751
ES.7140.2	chr12	-	6061	6	FSM	ENSMUSG00000020652.18	ENSMUST00000020981.12	2037	6	-300	-3724	29	1909	multi-exon	FALSE	canonical	0	0	junction_4	34.9708449997995	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATGGCCACGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	4284265	4259757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4283530_4283658_4283751
ES.7140.3	chr12	-	6221	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	32	-1905	32	1905	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGCCACGGT	NA	False	NA	NA	False	NA	NA	NA	4284262	4259761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ES.7140.4	chr12	-	6704	3	NNC	ENSMUSG00000020652.18	novel	1683	5	NA	NA	-5860	3	intron_retention	TRUE	canonical	0	0	junction_2	48.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCAGATTCTTTGTTAA	2430	False	NA	-6	True	AATAAA	-22	NA	4272406	4263478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4266779_4267207_4269529_4271323
ES.7140.5	chr12	-	2518	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	27.9026084005699	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4284239	4263481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283781
ES.7140.6	chr12	-	2493	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	40	1815	40	0	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4284254	4263481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ES.7140.7	chr12	-	2309	8	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.9324763569512	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283960	4263481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4272568_4272679_4281515_4281683_4283530_4283658_4283751
ES.7140.9	chr12	-	4260	1	Antisense	novelGene_ENSMUSG00000112770.2_AS_novelGene_ENSMUSG00000112297.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATGGCTTGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	4276363	4272103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_4272100_4276400
ES.7141.1	chr12	+	4272	1	Genic_Genomic	ENSMUSG00000111916.2	novel	NA	NA	NA	NA	2974	707	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTCTCTTTGAGCACT	NA	False	NA	NA	False	NA	NA	NA	4294106	4298378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_4294100_4298400
ES.7142.1	chr12	+	241	1	Intergenic	novelGene_5793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGCCAACCAACTGAACA	NA	False	NA	NA	False	AATGAA	-28	NA	4351054	4351295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4351100_4351300
ES.7143.1	chr12	+	179	1	Intergenic	novelGene_5794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	4455926	4456105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4455900_4456100
ES.7144.1	chr12	+	155	1	Intergenic	novelGene_5795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4500762	4500917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4500800_4500900
ES.7145.1	chr12	+	4378	1	Antisense	novelGene_ENSMUSG00000020647.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTACTCTGGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	4526431	4530809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_4526400_4530800
ES.7146.1	chr12	-	6802	21	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	25906	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_20	33.1415147511395	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4440890	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4440816
ES.7146.11	chr12	-	7330	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-198	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	26.270585591052	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTGCCTCTTCATTTA	NA	False	NA	-1	True	AATAGA	-18	NA	4527380	4297362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771_4527100_4527295
ES.7146.12	chr12	-	7206	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-30	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	30.5106947533331	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTGCCTCTTCATTTA	NA	False	NA	-1	True	AATAGA	-18	NA	4527212	4297362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4466670_4466806_4526771
ES.7146.14	chr12	-	5639	20	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	19	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	28.6238379628412	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGCTGCCTCTTCATT	NA	False	NA	-3	True	AATAGA	-16	NA	4527163	4297364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.15	chr12	-	6888	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-3798	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	30.786367981864	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGCTGCCTCTTCATT	NA	False	NA	-3	True	AATAGA	-16	NA	4408234	4297364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4408123
ES.7146.17	chr12	-	5255	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-36	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.519447455483	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGGCTGCCTCTTCATT	NA	False	NA	-3	True	AATAGA	-16	NA	4527218	4297364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4297648_4299699_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.18	chr12	-	5997	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-37	1369	-37	452	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTAGCTTTTTTTCCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	4527219	4298730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.2	chr12	-	7444	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	35.6400297450331	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527202	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4391113_4391212_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.20	chr12	-	5510	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-3787	448	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	26.3320847030245	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCGAGTAGCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	4408223	4298734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4408123
ES.7146.22	chr12	-	5197	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-20	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	33.8691270716421	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527202	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309310_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325005_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.23	chr12	-	5317	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-50	2062	-50	17	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527232	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.24	chr12	-	5262	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-50	17	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527232	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.25	chr12	-	5228	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	34	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.7588595044831	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527148	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299885_4303652_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.26	chr12	-	5427	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-48	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	36.6909640524774	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527230	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4362271_4362387_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.27	chr12	-	5493	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-2905	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	41.2559036596807	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4407341	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4391113_4391212_4394396_4394503_4404360_4404510_4406664
ES.7146.28	chr12	-	5109	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-32	17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	36.4912533389569	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527214	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4466670_4466806_4526771_4527159_4527196
ES.7146.29	chr12	-	5391	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	19	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	33.5135330845759	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4527163	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4469882_4470026_4526771
ES.7146.3	chr12	-	7295	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	30.39128436393	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527168	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466789_4526771
ES.7146.30	chr12	-	4930	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-3798	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	38.8801134661474	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4408234	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4391113_4391212_4394396_4394503_4404360_4404510_4408123
ES.7146.31	chr12	-	4881	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-3847	17	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_21	26.3320847030245	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACTTTTGTTGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	4408283	4299423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4408123
ES.7146.33	chr12	-	5128	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-37	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	27.282182103297	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCACTTTTGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	4527219	4299424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.34	chr12	-	4916	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-174	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	26.0972830351779	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCACTTTTGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	4527356	4299424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4527295
ES.7146.35	chr12	-	5351	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	19	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.7588595044831	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCACTTTTGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	4527163	4299424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303549_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.38	chr12	-	5143	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-25	16	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	27.4107084690548	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCACTTTTGTTGGGAGA	NA	False	NA	NA	False	NA	NA	NA	4527207	4299424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.4	chr12	-	6859	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	25904	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	25.9544341695446	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4440892	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4440816
ES.7146.41	chr12	-	5015	21	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-37	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	30.7328814138863	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527219	4299425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4526771
ES.7146.43	chr12	-	5110	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	20	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	26.7111873256258	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527162	4299425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4526771
ES.7146.44	chr12	-	5340	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	10	15	intron_retention	FALSE	canonical	3	76	junction_21	12.2886670501109	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527172	4299425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.45	chr12	-	5419	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-2	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	33.6524547791897	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527184	4299425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4420240_4420393_4466670_4466806_4526771
ES.7146.46	chr12	-	5144	23	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	40	15	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	26.5593441246311	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCACTTTTGTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	4527142	4299425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365785_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.47	chr12	-	5214	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	10	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	33.4141876529707	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCACTTTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	4527172	4299426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466655_4466806_4526771
ES.7146.48	chr12	-	5022	21	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	38	14	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	33.0110208869705	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCACTTTTGTTGGGA	NA	False	NA	NA	False	NA	NA	NA	4527144	4299426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4466670_4466806_4526771
ES.7146.49	chr12	-	5046	21	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	14	13	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	34.2299211217321	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTCACTTTTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	4527168	4299427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.5	chr12	-	7290	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527198	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.50	chr12	-	5117	21	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-2780	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	35.4802409800159	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAAGTTCACTTTTGT	NA	False	NA	NA	False	NA	NA	NA	4407216	4299431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4406664
ES.7146.53	chr12	-	5167	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-64514	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	33.5135330845759	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	3458	False	NA	NA	False	NA	NA	NA	4591696	4299453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4590554_4590844_4591644
ES.7146.54	chr12	-	5295	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6177272012571	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4527189	4299454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4303549_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.55	chr12	-	4943	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-2481	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_21	26.143073986437	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	4406917	4299454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4406664
ES.7146.57	chr12	-	4749	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	25919	-6	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_21	25.9544341695446	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	4440877	4299456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4440816
ES.7146.59	chr12	-	5349	22	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-24	-7	intron_retention	FALSE	canonical	0	0	junction_3	26.5932663292601	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGCAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4527206	4299457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299891_4303656_4303747_4309211_4309403_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.61	chr12	-	5342	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.6215047305986	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGCAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4527193	4299457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4391113_4391212_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.62	chr12	-	4952	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	25919	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	39.4000854019206	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGCAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4440877	4299457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4408224_4408317_4427512_4427625_4440816
ES.7146.63	chr12	-	6739	20	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	34	1211	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.4659194512388	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACTCTTTTTAAAGAA	NA	False	NA	NA	False	ACTAAA	-5	NA	4527148	4301584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4303747_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.64	chr12	-	6661	21	ISM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	16	4503	16	931	5prime_fragment	FALSE	canonical	3	76	junction_20	12.4750751500742	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATCTCTATAACTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	4527166	4301864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.65	chr12	-	4939	13	ISM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	17	41825	17	6555	5prime_fragment	FALSE	canonical	3	76	junction_12	14.6846480682681	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGATCCTGTTCCTCTTC	NA	False	NA	NA	False	AATAAA	-32	NA	4527165	4339186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.66	chr12	-	3621	13	ISM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	-21	43181	-21	5199	5prime_fragment	FALSE	canonical	3	76	junction_12	14.6846480682681	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAACATCTTTTCACT	NA	False	NA	NA	False	NA	NA	NA	4527203	4340542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.67	chr12	-	3434	12	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-6	5175	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	35.1102160734917	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4527188	4340566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.68	chr12	-	6155	1	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	13	-131904	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4527169	4521014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4521000_4527200
ES.7146.69	chr12	-	1039	1	Intergenic	novelGene_5796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4526425	4525386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4525400_4526400
ES.7146.7	chr12	-	7159	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	31.6458578246872	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527163	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7146.9	chr12	-	7548	24	NNC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.558389844365	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527199	4297361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4299748_4299835_4299891_4303549_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4391113_4391212_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ES.7147.1	chr12	-	302	2	NNC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	4603806	4602544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4602731_4603690
ES.7147.2	chr12	-	319	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	-23	1	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	4603808	4602544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4602746_4603690
ES.7147.3	chr12	-	477	3	FSM	ENSMUSG00000112819.2	ENSMUST00000217932.2	457	3	-21	1	-21	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	4603806	4602546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4602746_4603013_4603176_4603690
ES.7148.1	chr12	+	184	1	Intergenic	novelGene_5797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCCTTGAAATGAACT	2741	False	NA	NA	False	NA	NA	NA	4604717	4604901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4604700_4604900
ES.7149.1	chr12	-	157	1	Intergenic	novelGene_5798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATTAAGGA	NA	False	NA	NA	False	NA	NA	NA	4615556	4615399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4615400_4615600
ES.715.1	chr1	-	4365	22	NIC	ENSMUSG00000039342.6	novel	4543	24	NA	NA	-4	136	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	0.349927106111882	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATGGAATTGAATTGCA	NA	False	NA	NA	False	AATAGA	-16	NA	72739727	72682002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_72682471_72684082_72684130_72686152_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569_72697732_72697808_72697963_72698136_72698379_72704246_72704416_72705503_72705746_72709250_72709356_72713129_72713339_72714827_72715030_72718667_72718704_72719139_72719360_72726883_72726988_72729104_72729543_72737579_72738216_72739610
ES.7150.1	chr12	-	260	1	Genic_Genomic	ENSMUSG00000112505.2	novel	NA	NA	NA	NA	4185	89	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGTGACAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	4622571	4622311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4622300_4622600
ES.7151.1	chr12	+	218	1	Intergenic	novelGene_5799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTTATACCACAGTAAG	202	False	NA	NA	False	AGTAAA	-18	NA	4630114	4630332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4630100_4630300
ES.7152.1	chr12	-	178	1	Intergenic	novelGene_5800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAACAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	4632034	4631856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4631900_4632000
ES.7153.1	chr12	-	228	1	Intergenic	novelGene_5801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTAAAATTTAATAGGA	NA	False	NA	NA	False	ATTAAA	-8	NA	4633693	4633465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4633500_4633700
ES.7154.1	chr12	+	5937	39	NNC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	135	-3	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	17.6717531310779	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGACTCTCTATGTG	7151	False	NA	NA	False	AATAAA	-29	NA	4642772	4763959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4642939_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.10	chr12	+	6378	39	NNC	ENSMUSG00000020640.11	novel	6080	40	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.8931887875289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7189	False	NA	NA	False	AATAAA	-22	NA	4642810	4763952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643233_4663050_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.11	chr12	+	5801	38	NIC	ENSMUSG00000020640.11	novel	5804	33	NA	NA	-178	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.6790640607137	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTTTCAAAGCTTGACT	7208	False	NA	NA	False	AATAAA	-20	NA	4642829	4763950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4642932_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.14	chr12	+	4513	28	ISM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	6	39541	6	242	5prime_fragment	FALSE	canonical	3	59	junction_17	12.5285955496691	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAAGAAAAGAAA	7392	False	NA	NA	False	NA	NA	NA	4643013	4724409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415
ES.7154.15	chr12	+	9056	41	NNC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_21	28.662649912386	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTTTCAAAGCTTGACT	7393	False	NA	NA	False	AATAAA	-20	NA	4643014	4763950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708473_4709522_4709778_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4747430_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4760354_4760386_4761952_4762037_4762466_4762641_4763039
ES.7154.16	chr12	+	3900	29	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	11	2237	combination_of_known_junctions	FALSE	canonical	3	13	junction_28	17.6486037489008	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGGATAGTGGGTCTTT	7397	False	NA	NA	False	NA	NA	NA	4643018	4726404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.18	chr12	+	9597	28	ISM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	14	34449	14	-5	5prime_fragment	FALSE	canonical	3	59	junction_17	12.5285955496691	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTTGTATTGTGTATT	7400	False	NA	13	True	ATTAAA	-14	NA	4643021	4729501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415
ES.7154.2	chr12	+	6207	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	-212	-8	158	-4	multi-exon	FALSE	canonical	3	57	junction_33	12.8594576467878	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTTGACTCTCTATGT	7174	False	NA	NA	False	AATAAA	-28	NA	4642795	4763958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.20	chr12	+	4139	29	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	15	2480	combination_of_known_junctions	FALSE	canonical	3	13	junction_28	17.6486037489008	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGATGTTTGCTTATGTT	7401	False	NA	NA	False	NA	NA	NA	4643022	4726647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.21	chr12	+	6995	29	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	15	-3	combination_of_known_junctions	FALSE	canonical	3	13	junction_28	17.6486037489008	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTATTGTGTATTTC	7401	False	NA	15	True	ATTAAA	-16	NA	4643022	4729503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.22	chr12	+	6147	39	NNC	ENSMUSG00000020640.11	novel	6080	40	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	17.5621768412023	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7401	False	NA	NA	False	AATAAA	-22	NA	4643022	4763952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643233_4663069_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.23	chr12	+	6268	18	ISM	ENSMUSG00000020640.11	ENSMUST00000218072.2	2640	20	-33	1517	21	-1517	intron_retention	FALSE	canonical	3	59	junction_17	10.6663783121347	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	7407	False	NA	NA	False	NA	NA	NA	4643028	4706379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350
ES.7154.24	chr12	+	6124	40	NNC	ENSMUSG00000020640.11	novel	6080	40	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.3415911039483	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7407	False	NA	NA	False	AATAAA	-22	NA	4643028	4763952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643237_4643818_4643971_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.26	chr12	+	6022	40	NIC	ENSMUSG00000020640.11	novel	6080	40	NA	NA	-26	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_29	21.3182885806504	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTTCAAAGCTTGAC	7414	False	NA	NA	False	AATAAA	-19	NA	4643035	4763949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4747430_4747495_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.28	chr12	+	7143	29	NNC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	-15	-4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	22.5403266731122	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTGTATTGTGTATTT	7425	False	NA	14	True	ATTAAA	-15	NA	4643046	4729502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643233_4663069_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.29	chr12	+	3457	24	ISM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	40	47387	-14	-7604	5prime_fragment	FALSE	canonical	3	59	junction_17	10.5715672455159	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAAGCATACTTAATTC	7426	False	NA	NA	False	NA	NA	NA	4643047	4716563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159
ES.7154.3	chr12	+	6172	39	NNC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	158	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	20.8230408555262	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTTCAAAGCTTGAC	7174	False	NA	NA	False	AATAAA	-19	NA	4642795	4763949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4642932_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4758061_4758152_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.30	chr12	+	2330	16	NNC	ENSMUSG00000020640.11	novel	3968	17	NA	NA	-4	-4387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	22.0812640539943	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTGTATTTGGTTCAT	7436	False	NA	NA	False	AATAAA	-29	NA	4643057	4688370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4687973
ES.7154.31	chr12	+	5823	22	NIC	ENSMUSG00000020640.11	novel	5804	33	NA	NA	1196	-169	combination_of_known_junctions	FALSE	canonical	3	13	junction_21	18.9292752190215	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGCCTTAAATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	4680744	4729337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.32	chr12	+	7750	15	NIC	ENSMUSG00000020640.11	novel	5431	18	NA	NA	842	-6	intron_retention	FALSE	canonical	1	1	junction_2	30.293462620688	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACTTGTATTGTGTAT	NA	False	NA	12	True	ATTAAA	-13	NA	4685617	4729500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4685731_4686546_4686688_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7154.33	chr12	+	5782	1	NIC	ENSMUSG00000020640.11	novel	5987	39	NA	NA	2433	233	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAGAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	4687208	4692990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4687200_4693000
ES.7154.34	chr12	+	7274	22	NIC	ENSMUSG00000020640.11	novel	5804	33	NA	NA	4963	-1	intron_retention	FALSE	canonical	3	57	junction_18	13.9805501434287	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTTCAAAGCTTGAC	NA	False	NA	NA	False	AATAAA	-19	NA	4689738	4763949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4762641_4763039
ES.7154.36	chr12	+	5480	12	NIC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	8208	0	intron_retention	FALSE	canonical	3	57	junction_7	13.6205969456931	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	2581	False	NA	NA	False	AATAAA	-22	NA	4722742	4763952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4762037_4762466_4762641_4763039
ES.7154.37	chr12	+	2073	9	ISM	ENSMUSG00000020640.11	ENSMUST00000219007.2	4977	38	87874	-752	4210	-1	3prime_fragment	FALSE	canonical	3	57	junction_3	9.7082439194738	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTTCAAAGCTTGAC	NA	False	NA	NA	False	AATAAA	-19	NA	4751148	4763949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.38	chr12	+	1960	9	NNC	ENSMUSG00000020640.11	novel	1606	3	NA	NA	4518	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3194880702699	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAATCCTTTCAAAGCT	NA	False	NA	NA	False	AATAAA	-15	NA	4751456	4763945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4751565_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.4	chr12	+	5899	39	NIC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	159	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	16.9216255939665	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCAAAGCTTGACTCT	7175	False	NA	NA	False	AATAAA	-22	NA	4642796	4763952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4642932_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.6	chr12	+	6086	39	NNC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	163	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.8931887875289	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTCAAAGCTTGACTC	7179	False	NA	NA	False	AATAAA	-21	NA	4642800	4763951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4642932_4663050_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.7	chr12	+	5623	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	-207	571	163	182	multi-exon	FALSE	canonical	3	57	junction_33	12.8594576467878	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCACAGCACAGTGCCTT	7179	False	NA	NA	False	ACTAAA	-38	NA	4642800	4763379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.8	chr12	+	5931	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	-206	262	164	-1	multi-exon	FALSE	canonical	3	57	junction_33	12.8594576467878	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGACTAGATATTATC	7180	False	NA	NA	False	AATAAA	-18	NA	4642801	4763688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ES.7154.9	chr12	+	6914	29	NIC	ENSMUSG00000020640.11	novel	4977	38	NA	NA	165	-3	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.8643778875175	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGTATTGTGTATTTC	7181	False	NA	15	True	ATTAAA	-16	NA	4642802	4729503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4642932_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ES.7155.1	chr12	-	1070	1	FSM	ENSMUSG00000118449.2	ENSMUST00000170816.2	102	1	-73	-895	29	895	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAACATTAGTATCCCTA	NA	False	NA	NA	False	AATAAA	-9	NA	4643000	4641930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4641900_4643000
ES.7156.1	chr12	-	3632	8	FSM	ENSMUSG00000079177.5	ENSMUST00000111154.4	3004	8	27	-655	27	655	multi-exon	FALSE	canonical	0	0	junction_1	1.30930734141595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATATCTTTGTTCCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	4788392	4763014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4765708_4768576_4768719_4781139_4781306_4781424_4781507_4782740_4782930_4784967_4785037_4787678_4787786_4788208
ES.7156.2	chr12	-	2773	8	NNC	ENSMUSG00000079177.5	novel	3004	8	NA	NA	31	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.38505138783324	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTAGAGTTCACAGTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	4788388	4763802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4765708_4768576_4768691_4781139_4781306_4781424_4781507_4782740_4782891_4784967_4785037_4787678_4787786_4788208
ES.7156.3	chr12	-	1232	8	FSM	ENSMUSG00000079177.5	ENSMUST00000111154.4	3004	8	23	1749	23	130	multi-exon	FALSE	canonical	0	0	junction_1	1.30930734141595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCTGTGTGGTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	4788396	4765418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4765708_4768576_4768719_4781139_4781306_4781424_4781507_4782740_4782930_4784967_4785037_4787678_4787786_4788208
ES.7156.4	chr12	-	3902	1	NIC	ENSMUSG00000079177.5	novel	3004	8	NA	NA	3088	27	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4784683	4780781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4780800_4784700
ES.7156.5	chr12	-	1144	6	ISM	ENSMUSG00000079177.5	ENSMUST00000111154.4	3004	8	38	17112	38	27	5prime_fragment	FALSE	canonical	0	0	junction_1	1.46969384566991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	4788381	4780781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4781306_4781424_4781507_4782740_4782930_4784967_4785037_4787678_4787786_4788208
ES.7157.1	chr12	+	173	1	Intergenic	novelGene_5802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACACACACACAGATG	9459	False	NA	NA	False	NA	NA	NA	4791604	4791777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4791600_4791800
ES.7158.1	chr12	+	1437	5	NNC	ENSMUSG00000020639.15	novel	1306	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTGTGAAGTCTTC	1347	False	NA	NA	False	ATTAAA	-12	NA	4819013	4828807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4819291_4819981_4820270_4824391_4824530_4825419_4825526_4828179
ES.7159.1	chr12	-	3072	1	Genic_Genomic	ENSMUSG00000050545.11	novel	NA	NA	NA	NA	1600	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCTGTGATGATTAA	NA	False	NA	2	True	AATAAA	-16	NA	4792957	4789885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4789900_4793000
ES.7159.2	chr12	-	3020	2	NIC	ENSMUSG00000050545.11	novel	386	3	NA	NA	-440	1	intron_retention	FALSE	canonical	3	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTGTCTGTGATGAT	NA	False	NA	-1	True	AATAAA	-13	NA	4796170	4789888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4791208_4794469
ES.7159.3	chr12	-	3845	7	NIC	ENSMUSG00000050545.11	novel	2851	7	NA	NA	-154	1	intron_retention	FALSE	canonical	1	1	junction_1	8.1325819325039	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTGTCTGTGATGAT	NA	False	NA	-1	True	AATAAA	-13	NA	4819421	4789888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4790044_4795651_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ES.7159.4	chr12	-	4707	8	NNC	ENSMUSG00000050545.11	novel	2709	8	NA	NA	16	1	intron_retention	FALSE	canonical	2	2	junction_2	8.39825054668518	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTGTCTGTGATGAT	NA	False	NA	-1	True	AATAAA	-13	NA	4818982	4789888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4791208_4794469_4794607_4795651_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ES.7159.5	chr12	-	1160	9	NNC	ENSMUSG00000050545.11	novel	2851	7	NA	NA	76	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.39081998549647	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTGTCTGTGATGAT	NA	False	NA	-1	True	AATAAA	-13	NA	4819156	4789888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4790044_4795651_4795757_4798090_4798178_4798263_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ES.7159.6	chr12	-	1367	10	NIC	ENSMUSG00000050545.11	novel	2851	7	NA	NA	85	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	9.03081145609604	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGTGTCTGTGATGAT	NA	False	NA	-1	True	AATAAA	-13	NA	4819147	4789888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4790044_4791061_4791208_4795651_4795757_4798020_4798178_4798263_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ES.7159.7	chr12	-	1079	7	FSM	ENSMUSG00000050545.11	ENSMUST00000053458.7	2851	7	81	1691	81	0	multi-exon	FALSE	canonical	3	18	junction_3	2.69258240356725	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTATGTGATATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	4819151	4797906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4798178_4798263_4798352_4812326_4812408_4812999_4813192_4814078_4814148_4818389_4818522_4818905
ES.716.1	chr1	+	296	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATGAAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	72743457	72743753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72743500_72743800
ES.716.2	chr1	+	176	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72743458	72743634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72743500_72743600
ES.7160.1	chr12	+	188	1	FSM	ENSMUSG00000091269.3	ENSMUST00000169666.3	1346	1	1283	-125	1283	125	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTCTTGGATATCCTGT	NA	False	NA	NA	False	NA	NA	NA	4833452	4833640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4833500_4833600
ES.7161.1	chr12	+	804	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	-23	399	-23	-6	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTCTTCTGTTAAACT	NA	False	NA	29	True	AATAAA	-19	NA	4867520	4877260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ES.7161.2	chr12	+	1960	1	Genic_Genomic	ENSMUSG00000037361.9	novel	NA	NA	NA	NA	-1	452	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTTTTGTCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	4867542	4869502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_4867500_4869500
ES.7161.3	chr12	+	3988	2	FSM	ENSMUSG00000037361.9	ENSMUST00000219359.2	1774	2	-9	-2205	8	2205	multi-exon	FALSE	canonical	3	1147	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAACATAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4867551	4874313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4867820_4870593
ES.7161.5	chr12	+	1163	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	27	-10	-4	10	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGTAATACTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	4867570	4877669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ES.7162.1	chr12	-	990	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	-15	1	-15	-1	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGTTGTGGGAGGTTCT	NA	False	NA	-1	True	AATAAA	-28	NA	4891606	4883174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
ES.7163.1	chr12	+	1275	2	NNC	ENSMUSG00000051721.7	novel	605	2	NA	NA	-1603	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGTGGTGTGTGCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	4891699	4899345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4892492_4898862
ES.7163.10	chr12	+	3578	3	ISM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	75	2	-16	-2	intron_retention	FALSE	canonical	3	16	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGATTTATTCA	NA	False	NA	NA	False	NA	NA	NA	4893377	4906965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4893452_4900126_4901943_4905277
ES.7163.11	chr12	+	3374	4	NIC	ENSMUSG00000051721.7	novel	2202	4	NA	NA	-2	-3	intron_retention	FALSE	canonical	2	4	junction_3	30.8652987457868	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAGGATTTATTC	NA	False	NA	NA	False	NA	NA	NA	4893391	4906964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4893452_4898862_4901943_4905277_4905393_4906845
ES.7163.12	chr12	+	2330	3	ISM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	101	1224	10	-1182	5prime_fragment	FALSE	canonical	3	16	junction_1	0.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACGAGGAATATGGCTG	NA	False	NA	NA	False	NA	NA	NA	4893403	4905743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_4893452_4900126_4901943_4905277
ES.7163.2	chr12	+	3584	4	NNC	ENSMUSG00000051721.7	novel	2202	4	NA	NA	6	11869	intron_retention	FALSE	canonical	0	0	junction_3	7.78888096369861	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGGTCGTTTGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	4893308	4921912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4893452_4900126_4901943_4905277_4905393_4920402
ES.7163.3	chr12	+	3554	4	NNC	ENSMUSG00000051721.7	novel	4317	4	NA	NA	11	-748	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.97614984548545	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCTAAACAAGTTCTA	NA	False	NA	NA	False	TTTAAA	-16	NA	4893313	4909295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4893452_4900130_4901943_4905277_4905393_4907806
ES.7163.4	chr12	+	3015	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	21	1281	-4	-1281	multi-exon	FALSE	canonical	3	7	junction_3	4.49691252107735	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGGAGTGCCAATG	NA	False	NA	NA	False	AATAAA	-15	NA	4893323	4908762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
ES.7163.5	chr12	+	2177	4	FSM	ENSMUSG00000051721.7	ENSMUST00000220215.2	2202	4	23	2	-2	-2	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGATTTATTCA	NA	False	NA	NA	False	NA	NA	NA	4893325	4906965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4906845
ES.7163.6	chr12	+	2646	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	40	1631	-4	1445	multi-exon	FALSE	canonical	3	7	junction_3	4.49691252107735	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGCAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	4893342	4908412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
ES.7163.7	chr12	+	592	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	15	-2	-4	2	multi-exon	FALSE	canonical	3	75	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGTGGTGTGTGCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	4893342	4899345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4893452_4898862
ES.7163.8	chr12	+	4248	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	69	0	-22	0	multi-exon	FALSE	canonical	3	7	junction_3	4.49691252107735	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCTCTCACACGTTT	NA	False	NA	2	True	AATAAA	-15	NA	4893371	4910043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
ES.7163.9	chr12	+	3221	4	NNC	ENSMUSG00000051721.7	novel	2202	4	NA	NA	-18	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	7.78888096369861	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	4893375	4906963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4893452_4900126_4901943_4905277_4905884_4906240
ES.7164.1	chr12	+	3889	1	Antisense	novelGene_ENSMUSG00000020634.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTAAAGGTACGTGCT	NA	False	NA	NA	False	NA	NA	NA	4932374	4936263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_4932400_4936300
ES.7164.2	chr12	+	2150	2	Antisense	novelGene_ENSMUSG00000020634.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTAAAGGTACGTGCT	NA	False	NA	NA	False	NA	NA	NA	4932374	4936263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_4933982_4935720
ES.7165.1	chr12	-	361	1	Intergenic	novelGene_5803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAGAGAGAGA	9427	False	NA	NA	False	NA	NA	NA	4898319	4897958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4898000_4898300
ES.7166.1	chr12	-	221	2	Antisense	novelGene_ENSMUSG00000051721.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTTAGTGACTGATG	5690	False	NA	NA	False	NA	NA	NA	4904802	4904517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_4904575_4904638
ES.7167.1	chr12	-	160	1	Intergenic	novelGene_5804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTTTA	9879	False	NA	NA	False	NA	NA	NA	4907131	4906971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4907000_4907100
ES.7168.1	chr12	-	2132	2	Antisense	novelGene_ENSMUSG00000051721.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTGCAGCACAGGC	7737	False	NA	NA	False	NA	NA	NA	4910541	4908372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_4910363_4910399
ES.7168.2	chr12	-	1961	1	Antisense	novelGene_ENSMUSG00000051721.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCGAAAAACCAAAAAAAAAA	7910	False	NA	NA	False	NA	NA	NA	4910368	4908407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_4908400_4910400
ES.7169.1	chr12	-	3153	14	FSM	ENSMUSG00000037336.15	ENSMUST00000045921.14	2490	14	-18	-645	-17	13	multi-exon	FALSE	canonical	1	1	junction_1	2.01473859287828	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATGTTGCTTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	4924376	4912426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4914080_4915136_4915314_4915727_4915872_4916158_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4919659_4920498_4920624_4921375_4921502_4924270
ES.7169.10	chr12	-	9537	6	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	2384	intron_retention	FALSE	canonical	3	227	junction_1	400.19975012486	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4957498	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.100	chr12	-	1448	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	16	682	16	359	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATATCAATACTAATCT	NA	False	NA	-38	True	AATAAA	-15	NA	4957248	4930030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.101	chr12	-	1378	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-94	-319	-94	319	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTAGACTCTTCTCGG	NA	False	NA	60	True	NA	NA	NA	4957533	4930070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.102	chr12	-	1409	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-79	252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	491.650508209055	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGCTTTTCAGTTTCTA	NA	False	NA	-7	True	ATTAAA	-34	NA	4957518	4930137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944531_4944680_4952219_4952273_4957348
ES.7169.103	chr12	-	1535	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	49	1112	49	246	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTCGGAGCTTTTCAG	NA	False	NA	-13	True	ATTAAA	-28	NA	4957656	4930143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.105	chr12	-	1123	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	230	at_least_one_novel_splicesite	FALSE	non_canonical	2	12	junction_1	452.073002954169	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTGCCCGTGCTTCAT	NA	False	NA	-29	True	ATTAAA	-12	NA	4957510	4930159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930477_4930726_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.106	chr12	-	1090	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-40	229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456.120508602	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTATTGCCCGTGCTTCA	NA	False	NA	-30	True	ATTAAA	-11	NA	4957479	4930160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930482_4930732_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.107	chr12	-	4182	1	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	22909	216	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	809	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATCAATGTAGTTAT	NA	False	NA	-43	True	AATACA	-25	NA	4934355	4930173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930200_4934400
ES.7169.109	chr12	-	1193	5	NNC	ENSMUSG00000020634.13	novel	965	6	NA	NA	104	213	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_3	671.761304333615	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAGCATCAATGTAGT	NA	False	NA	-46	True	AATACA	-22	NA	4957601	4930176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4952219_4952268_4957348
ES.7169.11	chr12	-	5992	1	Genic_Genomic	ENSMUSG00000020634.13	novel	NA	NA	NA	NA	24625	2384	mono-exon	FALSE	NA	NA	NA	NA	NA	834	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4932639	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4926600_4932600
ES.7169.110	chr12	-	1298	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-61	213	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_1	455.297582783929	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAGCATCAATGTAGT	NA	False	NA	-46	True	AATACA	-22	NA	4957500	4930176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933870_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.112	chr12	-	1429	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-109	212	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	579.385635208291	833	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAAGCATCAATGTAG	NA	False	NA	-47	True	AATACA	-21	NA	4957548	4930177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.113	chr12	-	1342	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-166	-211	100	211	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAAAAGCATCAATGTA	NA	False	NA	-48	True	AATACA	-20	NA	4957605	4930178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.115	chr12	-	2315	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	-906	1287	-906	71	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTCTAAATTAGCAG	NA	False	NA	-9	True	ATTAAA	-20	NA	4958611	4930318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.116	chr12	-	4302	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-44	70	intron_retention	FALSE	canonical	3	1036	junction_3	132.965559450558	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTGGTCTAAATTAGCA	NA	False	NA	-10	True	ATTAAA	-19	NA	4957483	4930319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4944680_4952219_4952273_4957348
ES.7169.117	chr12	-	730	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-19	-202	combination_of_known_splicesites	FALSE	canonical	3	98	junction_1	450.324061093786	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTGATAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	4957458	4930591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.118	chr12	-	889	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	14	1243	14	-202	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTGATAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	4957250	4930591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.119	chr12	-	1178	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	-42	1560	-42	-202	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTGATAGTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	4957747	4930591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.12	chr12	-	4873	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	-2384	-59	2384	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4957498	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.120	chr12	-	2894	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	217	2636	-49	-1278	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATCTTAGTTTTGATCG	NA	False	NA	NA	False	AATAAA	-20	NA	4957488	4931667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.121	chr12	-	905	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-40	-1282	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	616.092457888154	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTATCTTAGTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	4957479	4931671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4931849_4933822_4933982_4935720_4935857_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.123	chr12	-	964	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-108	-1282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	480.404690512766	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGTATCTTAGTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	4957547	4931671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4931838_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.124	chr12	-	2686	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	39	3022	39	-1664	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAAGAAAATATTCTTGA	NA	False	NA	NA	False	NA	NA	NA	4957666	4932053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.126	chr12	-	4268	5	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-74	-1668	intron_retention	FALSE	canonical	3	1036	junction_1	112.68623474054	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGTTAAGAAAATATTC	NA	False	NA	NA	False	NA	NA	NA	4957513	4932057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.127	chr12	-	2463	5	ISM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-116	1669	-116	-1669	5prime_fragment	FALSE	canonical	3	58	junction_2	559.998828123774	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATGTTAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	4957555	4932058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.129	chr12	-	3522	5	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-132	-2472	intron_retention	FALSE	canonical	3	1036	junction_1	112.68623474054	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAACTGAGAGTGGCTGT	NA	False	NA	-4	True	NA	NA	NA	4957571	4932861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.13	chr12	-	3197	3	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	26952	2384	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	113.5	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4930312	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4929369_4929710
ES.7169.130	chr12	-	1696	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	212	3839	-54	-2481	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTGAGAATCAACTGAG	NA	False	NA	-13	True	NA	NA	NA	4957493	4932870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.131	chr12	-	1174	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	71	4502	71	-3144	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGTCAATGCAACATAA	NA	False	NA	NA	False	AATAAA	-16	NA	4957634	4933533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.132	chr12	-	2772	5	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-55	-3145	intron_retention	FALSE	canonical	3	1036	junction_1	112.68623474054	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTGTCAATGCAACATA	NA	False	NA	NA	False	AATAAA	-15	NA	4957494	4933534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.133	chr12	-	833	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	188	4726	-78	-3368	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAGACAAAGTTGATT	NA	False	NA	NA	False	TTTAAA	-18	NA	4957517	4933757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.134	chr12	-	376	4	NIC	ENSMUSG00000020634.13	novel	965	6	NA	NA	-18	-3516	combination_of_known_splicesites	FALSE	canonical	2	20	junction_2	643.925634077587	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTTGGAGCCCATTAC	NA	False	NA	NA	False	AATAAA	-25	NA	4957457	4933905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4933982_4935720_4935859_4952219_4952273_4957348
ES.7169.135	chr12	-	2415	5	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	-3518	intron_retention	FALSE	canonical	3	1036	junction_1	112.68623474054	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAACTTGGAGCCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	4957510	4933907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.136	chr12	-	663	6	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	207	4877	-59	-3519	5prime_fragment	FALSE	canonical	3	1036	junction_2	139.123542220575	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAACTTGGAGCCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	4957498	4933908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.137	chr12	-	5260	2	Genic_Genomic	ENSMUSG00000020634.13	novel	2696	7	NA	NA	2745	-17576	multi-exon	TRUE	non_canonical	0	0	junction_1	0	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAACCAAACTGGGC	NA	False	NA	NA	False	NA	NA	NA	4954519	4947965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4947997_4949290
ES.7169.138	chr12	-	3277	2	ISM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-164	18861	102	-18861	5prime_fragment	FALSE	canonical	3	1331	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAAATACTTTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	4957603	4949250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4952273_4957348
ES.7169.139	chr12	-	4579	1	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-54	-22525	mono-exon	FALSE	NA	NA	NA	NA	NA	742	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	4957493	4952914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4952900_4957500
ES.7169.14	chr12	-	3254	3	NNC	ENSMUSG00000020634.13	novel	2146	7	NA	NA	26773	2384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	113.5	784	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4930491	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4928885_4929348
ES.7169.140	chr12	-	772	1	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	-26337	mono-exon	FALSE	NA	NA	NA	NA	NA	741	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTTTTGACTCGGT	NA	False	NA	NA	False	GATAAA	-14	NA	4957498	4956726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4956700_4957500
ES.7169.16	chr12	-	4860	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	75	2364	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4957630	4926667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927660_4927784_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.17	chr12	-	4904	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	20	-2228	20	2228	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGGCTTACTTAGTTTT	NA	False	NA	-8	True	AGTAAA	-31	NA	4957685	4926803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.2	chr12	-	5986	8	NIC	ENSMUSG00000037336.15	novel	2868	12	NA	NA	-35	13	intron_retention	FALSE	canonical	1	1	junction_1	1.03015750727543	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATGTTGCTTAAGCTG	NA	False	NA	NA	False	NA	NA	NA	4924394	4912426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4914080_4915136_4917460_4917611_4919044_4919131_4919211_4919534_4919659_4920498_4920624_4921375_4921502_4924270
ES.7169.20	chr12	-	4740	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	53	2223	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGACGTGGCTTACTTA	NA	False	NA	-13	True	AGTAAA	-26	NA	4957652	4926808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.21	chr12	-	4623	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	9187	2221	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	547.181794896967	876	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAAGACGTGGCTTACT	NA	False	NA	-15	True	AGTAAA	-24	NA	4948077	4926810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4947835
ES.7169.22	chr12	-	4854	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	15	2221	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_1	455.297582783929	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAAGACGTGGCTTACT	NA	False	NA	-15	True	AGTAAA	-24	NA	4957690	4926810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933870_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.23	chr12	-	4593	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	2218	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4957510	4926813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927649_4927774_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.25	chr12	-	4575	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-54	2217	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCAGTAAGACGTGGCT	NA	False	NA	-19	True	AGTAAA	-20	NA	4957493	4926814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927666_4927791_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.28	chr12	-	4125	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-61	2216	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	510.995841470359	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTCAGTAAGACGTGGC	NA	False	NA	-20	True	AGTAAA	-19	NA	4957500	4926815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4928943_4929398_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.29	chr12	-	4442	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-81	2216	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	548.854387692117	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTCAGTAAGACGTGGC	NA	False	NA	-20	True	AGTAAA	-19	NA	4957520	4926815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927644_4927769_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.3	chr12	-	5697	10	NIC	ENSMUSG00000037336.15	novel	3173	12	NA	NA	1733	11	intron_retention	FALSE	canonical	1	1	junction_1	2.36225462505214	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTATGTTGCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	4922612	4912428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4914080_4915136_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4920624_4921375
ES.7169.30	chr12	-	4595	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-108	2216	combination_of_known_splicesites	FALSE	canonical	3	98	junction_1	450.324061093786	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTCAGTAAGACGTGGC	NA	False	NA	-20	True	AGTAAA	-19	NA	4957547	4926815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.33	chr12	-	4700	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	-22	-2532	-22	2215	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCCTCAGTAAGACGTGG	NA	False	NA	-21	True	AGTAAA	-18	NA	4957286	4926816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.34	chr12	-	4386	5	NIC	ENSMUSG00000020634.13	novel	2146	7	NA	NA	42	2214	combination_of_known_splicesites	FALSE	canonical	2	20	junction_3	673.951175902231	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCTCAGTAAGACGTG	NA	False	NA	-22	True	AGTAAA	-17	NA	4957222	4926817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4933822_4933982_4935720_4935859_4952219_4952273_4957140
ES.7169.35	chr12	-	4523	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-112	2214	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	568.338049833802	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCTCAGTAAGACGTG	NA	False	NA	-22	True	AGTAAA	-17	NA	4957551	4926817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.36	chr12	-	4590	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-53	-3572	-53	2214	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCTCAGTAAGACGTG	NA	False	NA	-22	True	AGTAAA	-17	NA	4957492	4926817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.37	chr12	-	4613	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	2214	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	590.777546437743	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCTCAGTAAGACGTG	NA	False	NA	-22	True	AGTAAA	-17	NA	4957498	4926817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.38	chr12	-	4949	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	68	2214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	579.781450731433	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCCTCAGTAAGACGTG	NA	False	NA	-22	True	AGTAAA	-17	NA	4957637	4926817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4951359_4951467_4952219_4952273_4957348
ES.7169.39	chr12	-	4461	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-40	2212	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	569.507019182344	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGATCCTCAGTAAGACG	NA	False	NA	-24	True	AGTAAA	-15	NA	4957479	4926819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930682_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952268_4957348
ES.7169.4	chr12	-	3675	17	Fusion	ENSMUSG00000037336.15_ENSMUSG00000020634.13	novel	2641	15	NA	NA	-55	3	multi-exon	TRUE	canonical	0	0	junction_10	580.130696481405	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGGTATGTT	NA	False	NA	NA	False	NA	NA	NA	4957494	4912436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_4914080_4915136_4915314_4915727_4915872_4916158_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4921375_4921644_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.40	chr12	-	3659	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-78	2210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456.120508602	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGATCCTCAGTAAGA	NA	False	NA	-26	True	AGTAAA	-13	NA	4957517	4926821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4928387_4929445_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.41	chr12	-	4611	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	75	2116	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATTTATTCTTTG	NA	False	NA	2	True	NA	NA	NA	4957630	4926915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.42	chr12	-	4650	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	2114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	593.0349819327	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTGTTATTTATTCTT	NA	False	NA	0	True	NA	NA	NA	4957498	4926917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941177_4941225_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.44	chr12	-	4619	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	191	-2114	-75	2114	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTGTTATTTATTCTT	NA	False	NA	0	True	NA	NA	NA	4957514	4926917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.45	chr12	-	4483	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-40	2103	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	590.777546437743	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTGTCCAATGGTTGT	NA	False	NA	-11	True	NA	NA	NA	4957479	4926928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.46	chr12	-	4450	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-28	-3457	-28	2099	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGGCTGTCCAATGG	NA	False	NA	-15	True	NA	NA	NA	4957467	4926932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.47	chr12	-	4592	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	2055	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	579.385635208291	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTGTTTTCATTTCAT	NA	False	NA	-3	True	NA	NA	NA	4957510	4926976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.48	chr12	-	3493	3	NNC	ENSMUSG00000020634.13	novel	965	6	NA	NA	23285	2052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	662.5	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATGTTGTTTTCATTT	NA	False	NA	-6	True	NA	NA	NA	4933979	4926979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4928943_4929398_4930772_4933822
ES.7169.49	chr12	-	4467	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-110	2052	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATGTTGTTTTCATTT	NA	False	NA	-6	True	NA	NA	NA	4957549	4926979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927672_4927796_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.5	chr12	-	3073	14	NNC	ENSMUSG00000037336.15	novel	2490	14	NA	NA	681	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.33572714625984	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGGTATGT	NA	False	NA	NA	False	NA	NA	NA	4923664	4912437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4914080_4915136_4915314_4915727_4915872_4916158_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4919673_4920498_4920624_4921375_4921502_4923641
ES.7169.50	chr12	-	4319	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	2051	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	568.338049833802	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAATGTTGTTTTCATT	NA	False	NA	-7	True	NA	NA	NA	4957510	4926980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.51	chr12	-	4388	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-51	2032	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGATGTCTTTTCATT	NA	False	NA	-26	True	NA	NA	NA	4957490	4926999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927660_4927784_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.53	chr12	-	4605	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	54	-1963	54	1963	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTCGTCGTGTTTTA	NA	False	NA	42	True	NA	NA	NA	4957651	4927068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.54	chr12	-	4543	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-10	1963	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTCGTCGTGTTTTA	NA	False	NA	42	True	NA	NA	NA	4957715	4927068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.56	chr12	-	4166	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	1962	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_2	496.858464085431	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTTCGTCGTGTTTT	NA	False	NA	41	True	NA	NA	NA	4957498	4927069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.57	chr12	-	4133	2	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	24403	1921	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTAGTGATTCACAC	NA	False	NA	0	True	GATAAA	-19	NA	4932861	4927110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4929369_4930986
ES.7169.58	chr12	-	4238	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-67	1921	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	510.995841470359	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTAGTGATTCACAC	NA	False	NA	0	True	GATAAA	-19	NA	4957506	4927110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348_4957389_4957442
ES.7169.59	chr12	-	4323	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-80	-3278	-80	1920	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTTTAGTGATTCACA	NA	False	NA	-1	True	GATAAA	-18	NA	4957519	4927111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.6	chr12	-	3796	11	NIC	ENSMUSG00000037336.15	novel	2490	14	NA	NA	-2300	1	intron_retention	FALSE	canonical	1	1	junction_1	2.24722050542442	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAGAGGTATG	NA	False	NA	NA	False	NA	NA	NA	4921561	4912438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4914080_4915136_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4919659_4920498_4920624_4921375
ES.7169.60	chr12	-	4532	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	-150	-2236	25	1919	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	-2	True	GATAAA	-17	NA	4957414	4927112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.61	chr12	-	4209	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-93	1919	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_4	568.338049833802	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	-2	True	GATAAA	-17	NA	4957532	4927112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.62	chr12	-	4229	6	NIC	ENSMUSG00000020634.13	novel	2146	7	NA	NA	46	1919	combination_of_known_junctions	FALSE	canonical	3	49	junction_5	633.42800695896	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	-2	True	GATAAA	-17	NA	4957218	4927112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957140
ES.7169.64	chr12	-	4267	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-45	1919	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	456.120508602	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTTTAGTGATTCAC	NA	False	NA	-2	True	GATAAA	-17	NA	4957484	4927112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927670_4927796_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.65	chr12	-	4185	6	NIC	ENSMUSG00000020634.13	novel	2146	7	NA	NA	35	1916	combination_of_known_splicesites	FALSE	canonical	3	49	junction_5	532.549565768295	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATCTGTTTAGTGATT	NA	False	NA	-5	True	GATAAA	-14	NA	4957229	4927115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.67	chr12	-	2033	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	1915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	527.218538895496	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGATCTGTTTAGTGAT	NA	False	NA	-6	True	GATAAA	-13	NA	4957510	4927116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4928515_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.68	chr12	-	4514	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	109	1914	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	491.650508209055	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGGATCTGTTTAGTGA	NA	False	NA	-7	True	GATAAA	-12	NA	4957596	4927117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941435_4944537_4944680_4952219_4952273_4957348
ES.7169.69	chr12	-	4559	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	0	1914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	648.643006591453	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGGATCTGTTTAGTGA	NA	False	NA	-7	True	GATAAA	-12	NA	4957439	4927117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941177_4941225_4941314_4941422_4944537_4944680_4952219_4952273_4956497_4956666_4957348
ES.7169.7	chr12	-	5339	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	158	-2801	-108	2801	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGAGTTTTTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	4957547	4926230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.70	chr12	-	4586	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-74	1914	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	569.167992847132	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGGATCTGTTTAGTGA	NA	False	NA	-7	True	GATAAA	-12	NA	4957513	4927117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4956497_4956666_4957348
ES.7169.72	chr12	-	4224	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-55	1913	at_least_one_novel_splicesite	FALSE	canonical	2	70	junction_2	510.049817494851	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGGATCTGTTTAGTG	NA	False	NA	-8	True	GATAAA	-11	NA	4957494	4927118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933870_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.73	chr12	-	4274	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-74	1912	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	631.263132819542	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGGATCTGTTTAGT	NA	False	NA	-9	True	GATAAA	-10	NA	4957513	4927119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927672_4927801_4930772_4933822_4933982_4935720_4935859_4941314_4941418_4944537_4944680_4952219_4952273_4957356
ES.7169.74	chr12	-	5824	1	Genic_Genomic	ENSMUSG00000020634.13	novel	NA	NA	NA	NA	24172	1763	mono-exon	FALSE	NA	NA	NA	NA	NA	840	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCATCACGACTCATT	NA	False	NA	NA	False	NA	NA	NA	4933092	4927268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_4927300_4933100
ES.7169.75	chr12	-	4189	7	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-44	1717	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	492.329976291872	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTACGAGTTAGATTA	NA	False	NA	NA	False	AATACA	-19	NA	4957483	4927314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935857_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.76	chr12	-	3873	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-40	1529	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGACTCCTTATTACAG	NA	False	NA	NA	False	TATAAA	-10	NA	4957479	4927502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.77	chr12	-	4088	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	128	-1520	128	1520	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTAGCATATAGACTCC	NA	False	NA	NA	False	TATAAA	-1	NA	4957577	4927511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.78	chr12	-	3626	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	2	-932	2	932	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGAGTCCCTTTTAGC	NA	False	NA	-13	True	ATTAAA	-27	NA	4957703	4928099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.8	chr12	-	5185	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-80	2801	at_least_one_novel_splicesite	TRUE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGAGTTTTTCATTTCA	NA	False	NA	NA	False	NA	NA	NA	4957519	4926230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.80	chr12	-	3147	5	NIC	ENSMUSG00000020634.13	novel	965	6	NA	NA	-40	926	combination_of_known_splicesites	FALSE	canonical	2	20	junction_3	583.46609798685	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACTATCAGAGTCCCT	NA	False	NA	-19	True	ATTAAA	-21	NA	4957479	4928105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4933822_4933982_4935720_4935859_4952219_4952273_4957348
ES.7169.81	chr12	-	3302	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-55	-2282	-55	924	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACACTATCAGAGTCC	NA	False	NA	-21	True	ATTAAA	-19	NA	4957494	4928107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.84	chr12	-	3428	6	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	9207	920	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	512.213861585178	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTACACAACACTATCAGA	NA	False	NA	-25	True	ATTAAA	-15	NA	4948057	4928111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4947835
ES.7169.85	chr12	-	3302	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	29	-1185	29	868	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTATGAAATCAGCATGTA	NA	False	NA	-77	True	AATAGA	-32	NA	4957235	4928163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.86	chr12	-	3208	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-93	844	combination_of_known_splicesites	FALSE	canonical	3	98	junction_1	450.324061093786	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGCATTTTATTTTGCC	NA	False	NA	-101	True	AATAGA	-8	NA	4957532	4928187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.87	chr12	-	2699	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	-1	-2	-1	2	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTTGTACATGCC	NA	False	NA	-4	True	GATAAA	-15	NA	4957706	4929029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.89	chr12	-	2466	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	-1	-319	-1	2	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGTTGTACATGCC	NA	False	NA	-4	True	GATAAA	-15	NA	4957265	4929029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ES.7169.9	chr12	-	4945	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	9	2384	at_least_one_novel_splicesite	FALSE	canonical	3	227	junction_1	380.113033672021	898	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATCAGTGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	4957696	4926647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.90	chr12	-	2405	6	FSM	ENSMUSG00000020634.13	ENSMUST00000141360.2	965	6	-81	-1359	-81	1	multi-exon	FALSE	canonical	3	58	junction_3	515.309770914544	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTTGTACATGC	NA	False	NA	-5	True	GATAAA	-14	NA	4957520	4929030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952273_4957348
ES.7169.91	chr12	-	2160	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	456.120508602	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTGGTTGTACATGC	NA	False	NA	-5	True	GATAAA	-14	NA	4957510	4929030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4929369_4929710_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.93	chr12	-	2340	6	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-71	-2	combination_of_known_splicesites	FALSE	canonical	3	98	junction_1	450.324061093786	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGGTGTGGTTGTACA	NA	False	NA	-8	True	GATAAA	-11	NA	4957510	4929033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_4930772_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.95	chr12	-	2503	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-42	-5	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	579.385635208291	868	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTGGGTGTGGTTGT	NA	False	NA	-11	True	GATAAA	-8	NA	4957481	4929036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.96	chr12	-	1279	1	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	27106	289	26665	28	mono-exon	FALSE	NA	NA	NA	NA	NA	767	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAAAACACTGGCT	NA	False	NA	NA	False	NA	NA	NA	4930599	4929320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_4929300_4930600
ES.7169.97	chr12	-	1679	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	44	973	44	385	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTTCTATACCTTCTA	NA	False	NA	-12	True	AATAAA	-41	NA	4957661	4930004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.7169.98	chr12	-	1530	8	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	363	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	579.385635208291	837	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAATACTAATCTATAT	NA	False	NA	-34	True	AATAAA	-19	NA	4957498	4930026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ES.717.1	chr1	-	281	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTTTTGGGGGGG	NA	False	NA	NA	False	AATAGA	-40	NA	72750015	72749734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72749700_72750000
ES.717.2	chr1	-	157	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	72750015	72749858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72749900_72750000
ES.7170.1	chr12	-	403	1	Intergenic	novelGene_5805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4959709	4959306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4959300_4959700
ES.7171.1	chr12	-	2490	1	Intergenic	novelGene_5806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTCTGATGCTACTGT	NA	False	NA	NA	False	CATAAA	-12	NA	4967251	4964761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4964800_4967300
ES.7171.2	chr12	-	1450	1	Intergenic	novelGene_5807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAACTATATACAAATA	NA	False	NA	NA	False	AATAAA	-18	NA	4967258	4965808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4965800_4967300
ES.7171.3	chr12	-	1075	1	Intergenic	novelGene_5808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AATACA	-3	NA	4967200	4966125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4966100_4967200
ES.7172.1	chr12	+	8167	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-71	19	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGAGTATTGTTGGCTT	NA	False	NA	26	True	AATAAA	-34	NA	4967281	5097413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.10	chr12	+	7497	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-5	-534	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACCTGTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	4967398	5096860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.11	chr12	+	6633	9	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	56.3292497287155	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCATGATT	NA	False	NA	9	True	AATAAA	-17	NA	4967404	5097396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987552_5066784_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.12	chr12	+	8102	29	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	1	14	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	43.4034672507595	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTGTGAGTATTGTT	NA	False	NA	21	True	AATAAA	-29	NA	4967404	5097408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405_5020469_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.14	chr12	+	4711	24	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	1	14171	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	29.1685020576535	239	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	4967407	5078214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042
ES.7172.15	chr12	+	8140	29	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	3	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	48.9263685635499	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAGCATGATTGTGA	NA	False	NA	13	True	AATAAA	-21	NA	4967409	5097400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5016539_5016669_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.16	chr12	+	5457	27	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	4	-11971	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.5741756210067	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGTCTTGTGGTA	NA	False	NA	NA	False	AATAAA	-31	NA	4967410	5085423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467
ES.7172.19	chr12	+	3978	19	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	5	4955	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	41.3793053781748	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTATATGTGGTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	4967411	5048713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5047483
ES.7172.24	chr12	+	8069	29	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	12	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	45.2425859299914	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTAGCATGATTGT	NA	False	NA	11	True	AATAAA	-19	NA	4967418	5097398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5050639_5050694_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.25	chr12	+	7277	30	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	50.8557915471604	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCTTTCTTTAGCAT	NA	False	NA	5	True	AATAAA	-13	NA	4967430	5097392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405_5020469_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005_5094956_5095738
ES.7172.26	chr12	+	4879	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	26	-3103	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	267	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTGGAGACTTTGGTG	NA	False	NA	NA	False	AATAAA	-13	NA	4967432	5094291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.29	chr12	+	8005	29	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.6068339091098	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATGTCTTTCTTTAGC	NA	False	NA	3	True	AATAAA	-11	NA	4967434	5097390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987435_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405_5020469_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.30	chr12	+	180	1	Intergenic	novelGene_5810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGTTTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	4981853	4982033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_4981900_4982000
ES.7172.31	chr12	+	4221	20	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	19295	735	combination_of_known_junctions	FALSE	canonical	3	129	junction_13	18.108016926442	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGTCCTGATTGTGA	NA	False	NA	NA	False	TATAAA	-16	NA	4986701	5064778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802
ES.7172.32	chr12	+	7509	27	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	19979	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_20	18.5988483450808	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTTTCTTTAGCATGA	NA	False	NA	7	True	AATAAA	-15	NA	4987385	5097394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.33	chr12	+	9422	3	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-13258	15158	intron_retention	FALSE	non_canonical	0	0	junction_1	99	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATACTCTGCAAAATAT	NA	False	NA	NA	False	ACTAAA	-21	NA	5006093	5020152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_5010632_5010734_5011307_5015840
ES.7172.34	chr12	+	8166	18	NNC	ENSMUSG00000052812.6	novel	1343	8	NA	NA	-10108	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.6585923448217	297	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTCTTTAGCATGATT	NA	False	NA	9	True	AATAAA	-17	NA	5009243	5097396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_5010632_5010734_5011307_5015840_5016001_5019351_5019443_5020405_5020469_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.35	chr12	+	4672	1	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-8971	10058	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5010380	5015052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_5010400_5015100
ES.7172.36	chr12	+	5380	14	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	67	-534	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	33.2473249357691	292	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACCTGTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	5019418	5096860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.37	chr12	+	5605	12	NNC	ENSMUSG00000052812.6	novel	3034	2	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	56.6247616892437	286	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGTCTTTCTTTAGCA	NA	False	NA	4	True	AATAAA	-12	NA	5032032	5097391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_5032199_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.38	chr12	+	176	1	Intergenic	novelGene_5813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATACCAAT	NA	False	NA	NA	False	NA	NA	NA	5034616	5034792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_5034600_5034800
ES.7172.39	chr12	+	3258	1	NIC	ENSMUSG00000052812.6	novel	1343	8	NA	NA	16763	8314	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	5048814	5052072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_5048800_5052100
ES.7172.4	chr12	+	4181	22	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-14	734	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	48.3671240080207	227	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGTGTCCTGATTGTG	NA	False	NA	NA	False	TATAAA	-15	NA	4967338	5064777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405_5020469_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802
ES.7172.40	chr12	+	3112	3	ISM	ENSMUSG00000052812.6	ENSMUST00000045664.7	8035	31	116627	536	51979	-536	3prime_fragment	FALSE	canonical	3	169	junction_2	3.5	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTACCTGTGATTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	5084030	5096858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_5084161_5084467_5084597_5094005
ES.7172.5	chr12	+	8079	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-3	14	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTGTGAGTATTGTT	NA	False	NA	21	True	AATAAA	-29	NA	4967349	5097408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.6	chr12	+	4974	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	2	-3101	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGAGACTTTGGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	4967354	5094293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.7	chr12	+	4099	21	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	7	736	combination_of_known_junctions	FALSE	canonical	3	129	junction_14	17.6790129814987	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTCCTGATTGTGAA	NA	False	NA	NA	False	TATAAA	-17	NA	4967359	5064779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802
ES.7172.8	chr12	+	8075	29	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	49.0436602655725	304	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTTTAGCATGAT	NA	False	NA	8	True	AATAAA	-16	NA	4967394	5097395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5050639_5050694_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ES.7172.9	chr12	+	2829	16	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	-5	16114	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	43.646254771235	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTGTTCAGTTATG	NA	False	NA	NA	False	AATAAA	-18	NA	4967398	5021108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405
ES.7173.1	chr12	-	158	1	Intergenic	novelGene_5809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	4976145	4975987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_4976000_4976100
ES.7174.1	chr12	-	5227	2	Antisense	novelGene_ENSMUSG00000052812.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-8	NA	5010160	5002861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_5002878_5004949
ES.7174.2	chr12	-	880	1	Intergenic	novelGene_5811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-8	NA	5003741	5002861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_5002900_5003700
ES.7174.3	chr12	-	3510	1	Antisense	novelGene_ENSMUSG00000052812.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAAGAAAATTTCACAG	NA	False	NA	NA	False	NA	NA	NA	5010157	5006647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_5006600_5010200
ES.7174.4	chr12	-	1795	1	Intergenic	novelGene_5812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5010157	5008362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_5008400_5010200
ES.7175.1	chr12	-	4978	4	Antisense	novelGene_ENSMUSG00000052812.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAACTGGTCAAAATTGT	NA	False	NA	NA	False	NA	NA	NA	5085851	5073916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_5074703_5077040_5077179_5081490_5084158_5084464
ES.7176.1	chr12	-	2642	1	Intergenic	novelGene_5814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACTTAGGAATCCTAGG	NA	False	NA	NA	False	AATATA	-37	NA	5416416	5413774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_5413800_5416400
ES.7177.1	chr12	-	3834	1	Intergenic	novelGene_5815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	5667659	5663825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_5663800_5667700
ES.7178.1	chr12	-	180	1	Intergenic	novelGene_5816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAATGAGGC	NA	False	NA	NA	False	NA	NA	NA	6998623	6998443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_6998400_6998600
ES.7179.1	chr12	-	189	1	Intergenic	novelGene_5817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATAAAAGAGTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	7837591	7837402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_7837400_7837600
ES.718.1	chr1	+	482	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-51	127	-51	69	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTTGTTTTGAGAC	NA	False	NA	46	True	ATTAAA	-33	NA	72750397	72752845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ES.718.10	chr1	+	354	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750448	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72750483_72750830_72750964_72751312_72751384_72752660
ES.718.11	chr1	+	715	3	FSM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	-22	-28	2	7	multi-exon	FALSE	canonical	2	15690	junction_1	1470.5	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGCCTTGTTTGTG	NA	False	NA	5	True	AATAAA	-22	NA	72750450	72752783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72750960_72751300_72751384_72752660
ES.718.14	chr1	+	419	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	2	381	junction_1	8000.53791247119	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750476	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72750568_72750830_72750960_72751300_72751384_72752660
ES.718.16	chr1	+	278	3	NNC	ENSMUSG00000046330.11	novel	400	4	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7845	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750872	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72750960_72751300_72751390_72752674
ES.718.17	chr1	+	201	2	ISM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	826	-21	359	0	3prime_fragment	FALSE	canonical	3	18631	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72751298	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_72751384_72752660
ES.718.2	chr1	+	579	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	-23	2	-23	-2	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTACATAGCTTGGT	NA	False	NA	17	True	AATAAA	-15	NA	72750425	72752970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ES.718.3	chr1	+	382	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7606.40918348906	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750426	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72750483_72750830_72750964_72751306_72751384_72752660
ES.718.6	chr1	+	520	5	NIC	ENSMUSG00000046330.11	novel	400	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	6621.49731933798	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750448	72752776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_72750483_72750830_72750960_72751300_72751384_72752340_72752499_72752660
ES.718.8	chr1	+	356	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4319.95102852901	703	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTAACTTTTTTTTTTTTG	NA	False	NA	-6	True	AATAAA	-11	NA	72750448	72752772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72750483_72750830_72750964_72751300_72751378_72752660
ES.7180.1	chr12	+	419	1	Intergenic	novelGene_5818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAACCAT	NA	False	NA	NA	False	AATAAA	-45	NA	7911251	7911670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_7911300_7911700
ES.7181.1	chr12	+	175	1	Intergenic	novelGene_5819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGATTTCT	NA	False	NA	NA	False	NA	NA	NA	8091113	8091288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8091100_8091300
ES.7182.1	chr12	+	2149	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-13	230	combination_of_known_junctions	TRUE	canonical	3	188	junction_5	23.7533623350932	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGAACAGTTGGAAGC	NA	False	NA	NA	False	AATAAA	-15	NA	8258120	8335173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.10	chr12	+	1171	6	NIC	ENSMUSG00000037669.16	novel	1159	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	22.8700677742765	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAACTAACATTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	8258144	8326210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807
ES.7182.11	chr12	+	10718	6	NIC	ENSMUSG00000037669.16	novel	2626	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	188	junction_5	22.8700677742765	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258146	8335759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807
ES.7182.12	chr12	+	3478	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	772	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGCAGTGTTAATGT	NA	False	NA	NA	False	GATAAA	-21	NA	8258149	8336531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.13	chr12	+	2387	5	FSM	ENSMUSG00000037669.16	ENSMUST00000218305.2	1587	5	15	-815	1	-1	multi-exon	FALSE	canonical	2	7	junction_2	100.260909630823	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTGTGGTCTGAT	NA	False	NA	17	True	AATAAA	-17	NA	8258150	8335758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8258205_8270599_8270756_8318363_8318599_8325807_8325891_8333899
ES.7182.14	chr12	+	3763	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	49	-1075	6	1075	multi-exon	FALSE	canonical	3	35	junction_1	76.8839312788367	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTTGTTTATATCTT	NA	False	NA	NA	False	AATAAA	-23	NA	8258155	8336834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.15	chr12	+	3775	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	6	1075	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTTGTTTATATCTT	NA	False	NA	NA	False	AATAAA	-23	NA	8258155	8336834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.16	chr12	+	2299	4	NNC	ENSMUSG00000037669.16	novel	2626	6	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.29983164553722	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTGTGGTCTGAT	NA	False	NA	17	True	AATAAA	-17	NA	8258160	8335758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8258210_8270599_8270756_8318363_8318599_8333899
ES.7182.17	chr12	+	2783	8	NNC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	107.023934000669	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTGTGGTCTGAT	NA	False	NA	17	True	AATAAA	-17	NA	8258165	8335758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8330721_8330828_8333899
ES.7182.18	chr12	+	3153	1	Intergenic	novelGene_5821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGGTGGCATTTGGT	NA	False	NA	NA	False	AATAAA	-15	NA	8302018	8305171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8302000_8305200
ES.7182.19	chr12	+	1982	1	Intergenic	novelGene_5823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTAGCCACTGTTACT	9558	False	NA	NA	False	AATAAA	-23	NA	8323016	8324998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8323000_8325000
ES.7182.2	chr12	+	2735	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-11	2	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTGGTCTGATCTC	NA	False	NA	20	True	AATAAA	-20	NA	8258122	8335761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.20	chr12	+	3738	2	NNC	ENSMUSG00000037669.16	novel	1402	5	NA	NA	12526	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTACTGTGTGTGGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	8330945	8335756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8332827_8333899
ES.7182.3	chr12	+	2720	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	17	0	-10	0	multi-exon	FALSE	canonical	3	35	junction_1	76.8839312788367	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258123	8335759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.4	chr12	+	2571	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-8	-3	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	103.217440386787	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTACTGTGTGTGGTCTG	NA	False	NA	15	True	AATAAA	-15	NA	8258125	8335756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258193_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.5	chr12	+	2817	8	NNC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.605892550696	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTGTGGTCTGAT	NA	False	NA	17	True	AATAAA	-17	NA	8258127	8335758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8258205_8259077_8259168_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.6	chr12	+	2137	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	21	579	-6	237	multi-exon	FALSE	canonical	3	35	junction_1	76.8839312788367	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTTGGAAGCATTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	8258127	8335180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7182.7	chr12	+	2542	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	109.117551292173	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTGTGTGTGGTCTGAT	NA	False	NA	17	True	AATAAA	-17	NA	8258127	8335758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258193_8270599_8270756_8277219_8277364_8318363_8318599_8325807_8325891_8333899
ES.7182.8	chr12	+	2579	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	-6	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	91.7243697171041	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTACTGTGTGTGGTC	NA	False	NA	13	True	AATAAA	-13	NA	8258127	8335754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8258205_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ES.7183.1	chr12	-	176	1	Intergenic	novelGene_5820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAAATAAAAGG	NA	False	NA	NA	False	NA	NA	NA	8259853	8259677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8259700_8259900
ES.7184.1	chr12	-	176	1	Intergenic	novelGene_5822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGCTGTTCATAT	NA	False	NA	NA	False	NA	NA	NA	8309196	8309020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8309000_8309200
ES.7185.1	chr12	+	3016	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	-57	0	-57	0	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTTGTTCTTTTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	8363374	8393824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ES.7185.2	chr12	+	2082	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4	873	4	-873	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAATGCAGCCACTT	NA	False	NA	NA	False	AATGAA	-15	NA	8363435	8392951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ES.7185.3	chr12	+	2733	6	NIC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	8	-10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	58.3355809090815	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAGAATTTCAGTGTT	NA	False	NA	NA	False	AGTAAA	-14	NA	8363439	8393814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8363498_8367784_8367951_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ES.7185.4	chr12	+	3126	8	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.7980832175379	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	8363440	8393821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8363498_8366278_8366458_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ES.7185.5	chr12	+	2497	5	NIC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	10	-12	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	61.9515940069342	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCCAGAATTTCAGTG	NA	False	NA	NA	False	AGTAAA	-12	NA	8363441	8393812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8363498_8367784_8367951_8386237_8386396_8387632_8387769_8391831
ES.7185.6	chr12	+	1205	3	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	15	21318	15	-1492	5prime_fragment	FALSE	canonical	3	118	junction_1	13.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACTGAGTGACATTCAT	NA	False	NA	NA	False	CATAAA	-18	NA	8363446	8372506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8363498_8367784_8367951_8371518
ES.7185.7	chr12	+	2983	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	18	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.6881675692481	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCAGTGTTGTTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	8363449	8393820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ES.7185.8	chr12	+	2964	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.7184270936277	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCAGTGTTGTTCTTTT	NA	False	NA	NA	False	AGTAAA	-22	NA	8363449	8393822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8363498_8367784_8367951_8373869_8374102_8386237_8386396_8387632_8387769_8391504_8391738_8391831
ES.7185.9	chr12	+	4498	1	NIC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	21713	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCAGTGTTGTTCTTT	NA	False	NA	NA	False	AGTAAA	-21	NA	8389323	8393821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8389300_8393800
ES.7186.1	chr12	+	178	1	Intergenic	novelGene_5824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATATTAACTCAGC	2658	False	NA	NA	False	NA	NA	NA	8395943	8396121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8395900_8396100
ES.7187.1	chr12	-	2447	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	-105	7	-105	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACAGCTCCTGTGGCTT	NA	False	NA	80	True	ATTAAA	-21	NA	8550114	8547667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_8547700_8550100
ES.7188.1	chr12	+	3717	4	NNC	ENSMUSG00000112276.2	novel	1194	3	NA	NA	-14	25410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGGTCTCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	8561186	8638091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8561465_8571144_8571233_8622209_8622404_8634934
ES.7189.1	chr12	-	6136	6	NNC	ENSMUSG00000020600.14	novel	1467	6	NA	NA	-7297	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGGGATTGATTATTG	2201	False	NA	NA	False	AATAAA	-19	NA	8596863	8578483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_8579576_8580194_8580283_8584380_8584506_8585376_8585507_8588786_8593365_8596740
ES.7189.2	chr12	-	176	1	Intergenic	novelGene_5825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACATAAGTAAAGCAT	4104	False	NA	NA	False	NA	NA	NA	8594960	8594784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8594800_8595000
ES.719.1	chr1	-	171	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	72759227	72759056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72759100_72759200
ES.7190.1	chr12	+	308	1	Intergenic	novelGene_5831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	8688973	8689281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8689000_8689300
ES.7190.2	chr12	+	174	1	Intergenic	novelGene_5830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAATATAGAG	NA	False	NA	NA	False	NA	NA	NA	8688973	8689147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8689000_8689100
ES.7191.1	chr12	-	3453	3	Intergenic	novelGene_5826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGTCTCGCTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	8657340	8649707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8650238_8652999_8655410_8656827
ES.7191.2	chr12	-	720	2	Intergenic	novelGene_5827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTGGTCTCGCTTCC	NA	False	NA	NA	False	NA	NA	NA	8691034	8649710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8650238_8690841
ES.7191.3	chr12	-	3697	1	Intergenic	novelGene_5828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	81	False	NA	NA	False	NA	NA	NA	8674758	8671061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8671100_8674800
ES.7191.4	chr12	-	3174	1	Intergenic	novelGene_5829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTTCTTGGTCATGTT	NA	False	NA	NA	False	NA	NA	NA	8691030	8687856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8687900_8691000
ES.7192.1	chr12	-	176	1	Intergenic	novelGene_5832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAACTTCATACG	NA	False	NA	NA	False	NA	NA	NA	8702114	8701938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8701900_8702100
ES.7193.1	chr12	+	6066	20	NIC	ENSMUSG00000020594.15	novel	5874	20	NA	NA	-195	-9	combination_of_known_junctions	TRUE	canonical	2	7	junction_1	49.0298682217211	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTCAAGAGTGCCTG	NA	False	NA	29	True	AATAAA	-41	NA	8723938	8802572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.10	chr12	+	5966	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.0966423659373	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724240	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724265_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.11	chr12	+	6281	21	FSM	ENSMUSG00000020594.15	ENSMUST00000163569.8	3560	21	-169	-2552	-7	-4	multi-exon	FALSE	canonical	3	13	junction_16	41.8388575369835	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAATATCCCTCTATA	NA	False	NA	10	True	AATAAA	-22	NA	8724251	8802553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.12	chr12	+	6054	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-215	-2544	-4	-9	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTCAAGAGTGCCTG	NA	False	NA	29	True	AATAAA	-41	NA	8724254	8802572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.13	chr12	+	6224	22	NNC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-4	-9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.3794018720488	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTCAAGAGTGCCTG	NA	False	NA	29	True	AATAAA	-41	NA	8724254	8802572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.14	chr12	+	3880	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-4	33	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	42.6449000467817	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTGGATGTGGTTT	NA	False	NA	7	True	AATAAA	-19	NA	8724254	8800353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.15	chr12	+	6094	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-4	9	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.6904508091679	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTGTCAAGAGTGCC	NA	False	NA	27	True	AATAAA	-39	NA	8724254	8802570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.16	chr12	+	6000	20	NIC	ENSMUSG00000020594.15	novel	3560	21	NA	NA	-7	-32	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	43.0400831024129	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	NA	False	NA	9	True	TATAAA	-34	NA	8724267	8802525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.17	chr12	+	6215	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	96	0	45	0	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724319	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.19	chr12	+	5207	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	116	988	65	119	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAGTGCTAAAAACTGA	NA	False	NA	50	True	TATAAA	-20	NA	8724339	8801573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.2	chr12	+	3868	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	16	1100	5	34	multi-exon	FALSE	canonical	2	7	junction_1	41.9630790100059	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGGATGTGGTTTT	NA	False	NA	8	True	AATAAA	-20	NA	8724149	8800354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.20	chr12	+	4023	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	120	2168	69	73	multi-exon	FALSE	canonical	3	78	junction_1	34.6128227684481	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCCCTGACAATGTACA	NA	False	NA	47	True	AATAAA	-14	NA	8724343	8800393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.21	chr12	+	5065	21	NIC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	71	-2	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	40.619299600067	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTATGAAAATATTTT	NA	False	NA	12	True	ATTAAA	-15	NA	8724345	8801452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.23	chr12	+	6162	21	NIC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-72	-5	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	40.619299600067	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724348	8802552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.24	chr12	+	5938	20	NIC	ENSMUSG00000020594.15	novel	3295	20	NA	NA	-71	8	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	44.2752658826016	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTCTGTCAAGAGTGC	NA	False	NA	26	True	AATAAA	-38	NA	8724349	8802569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769005_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.25	chr12	+	3982	21	FSM	ENSMUSG00000020594.15	ENSMUST00000163569.8	3560	21	-69	-353	-69	34	multi-exon	FALSE	canonical	3	13	junction_16	41.8388575369835	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTGGATGTGGTTTT	NA	False	NA	8	True	AATAAA	-20	NA	8724351	8800354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.26	chr12	+	3736	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-116	-325	-67	33	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTGGATGTGGTTT	NA	False	NA	7	True	AATAAA	-19	NA	8724353	8800353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.27	chr12	+	3410	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-115	0	-66	0	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCACATATTTTGTAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	8724354	8800028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.28	chr12	+	4834	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-113	-1426	-64	0	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	NA	False	NA	14	True	ATTAAA	-17	NA	8724356	8801454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.29	chr12	+	3640	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.0168281024996	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCACATATTTTGTAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	8724358	8800028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793763_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.3	chr12	+	6092	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.1872389746497	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	NA	False	NA	9	True	TATAAA	-34	NA	8724220	8802525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.30	chr12	+	4896	20	NIC	ENSMUSG00000020594.15	novel	3295	20	NA	NA	-61	80	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	41.7348177646724	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAGTATTTTATATAAA	NA	False	NA	11	True	GATAAA	-23	NA	8724359	8801534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.31	chr12	+	4949	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-110	-1544	-61	118	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAGTGCTAAAAACTG	NA	False	NA	49	True	TATAAA	-19	NA	8724359	8801572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.32	chr12	+	4085	22	NIC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-61	26	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	48.276602878491	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTATTTACAGTGGAT	NA	False	NA	0	True	AATAAA	-12	NA	8724359	8800346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.33	chr12	+	6298	22	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-61	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.8243553095603	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724359	8802552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724481_8748090_8748160_8749063_8749199_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.35	chr12	+	4954	21	NIC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	49.6337586729033	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	NA	False	NA	14	True	ATTAAA	-17	NA	8724361	8801454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.38	chr12	+	6051	21	NIC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	53.8203260859687	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724377	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.39	chr12	+	3786	23	NIC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	57.6450559834826	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCACATATTTTGTAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	8724396	8800028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724481_8748090_8748160_8749063_8749189_8750148_8750223_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769005_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.4	chr12	+	5245	22	NNC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-2	106	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	53.3794018720488	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCCACTTATGTTCAG	NA	False	NA	37	True	TATAAA	-7	NA	8724221	8801560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.40	chr12	+	6062	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-22	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.3940472675097	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	NA	False	NA	-11	True	AATAAA	-1	NA	8724398	8802532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724481_8742417_8742610_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.41	chr12	+	6240	22	NNC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	56.7476811837091	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724399	8802552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724481_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759514_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.43	chr12	+	5695	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-60	-2340	-11	-189	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGCTTTAATTCTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	8724409	8802368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.44	chr12	+	6555	24	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.7959568837121	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCAAGAGTGCCTGA	NA	False	NA	30	True	AATAAA	-42	NA	8724412	8802573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724481_8728169_8728234_8728359_8728525_8742417_8742610_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.45	chr12	+	6319	22	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-16	-25	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	52.7226517213915	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	NA	False	NA	-11	True	AATAAA	-1	NA	8724664	8802532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.46	chr12	+	4126	22	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	4	33	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	52.2745239130892	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTGGATGTGGTTT	NA	False	NA	7	True	AATAAA	-19	NA	8724684	8800353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.47	chr12	+	6177	21	NNC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	47.8970510574503	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724698	8802552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.48	chr12	+	6287	22	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	59.401207069895	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724719	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769005_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.49	chr12	+	4825	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	42.1280201659477	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTATGAAAATATTTTGGA	NA	False	NA	15	True	ATTAAA	-18	NA	8724725	8801455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.5	chr12	+	3672	20	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	2	33	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.7931425588534	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTGGATGTGGTTT	NA	False	NA	7	True	AATAAA	-19	NA	8724225	8800353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.50	chr12	+	6158	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-9	-5	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.0381225204078	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAAAATATCCCTCTAT	NA	False	NA	9	True	AATAAA	-21	NA	8724726	8802552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.51	chr12	+	5915	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	52.6546791411463	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724726	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.52	chr12	+	3935	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-8	31	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	46.4759077372352	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACAGTGGATGTGGT	NA	False	NA	5	True	AATAAA	-17	NA	8724727	8800351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.53	chr12	+	4834	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-6	8	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	48.2412565815309	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTTTGGAAAAAATT	NA	False	NA	22	True	ATTAAA	-25	NA	8724729	8801462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.54	chr12	+	3708	20	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-2	32	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	42.809311126361	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACAGTGGATGTGGTT	NA	False	NA	6	True	AATAAA	-18	NA	8724733	8800352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.55	chr12	+	3621	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.6952035610812	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCACATATTTTGTAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	8724733	8800028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.56	chr12	+	3733	20	NNC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-2	33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.080384894077	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACAGTGGATGTGGTTT	NA	False	NA	7	True	AATAAA	-19	NA	8724733	8800353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724858_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.57	chr12	+	5119	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-2	72	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	41.6952035610812	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGAAGTCAGTATTT	NA	False	NA	3	True	GATAAA	-15	NA	8724733	8801526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724834_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.58	chr12	+	6002	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	8	-32	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	53.7623474189883	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	NA	False	NA	9	True	TATAAA	-34	NA	8724743	8802525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.59	chr12	+	3380	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-14	-203	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.0381225204078	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGATTTTTTTTTAA	NA	False	NA	NA	False	AAAACA	-14	NA	8724750	8799798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.6	chr12	+	4969	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5382740536507	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATGAAAATATTTTGG	NA	False	NA	14	True	ATTAAA	-17	NA	8724227	8801454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724265_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.60	chr12	+	5935	20	NIC	ENSMUSG00000020594.15	novel	6218	22	NA	NA	-6	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	50.2012570060367	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAATATCCCTCTATA	8399	False	NA	10	True	AATAAA	-22	NA	8748089	8802553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8748160_8749063_8749189_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.61	chr12	+	5763	19	NIC	ENSMUSG00000020594.15	novel	5874	20	NA	NA	-6	-33	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	44.3774495063806	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCTGGTCTTGTG	8399	False	NA	8	True	TATAAA	-33	NA	8748089	8802524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769005_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.63	chr12	+	5938	19	NIC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-4295	-30	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	41.3229153537518	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAACCTGGTCTTGTGTTT	5796	False	NA	11	True	TATAAA	-36	NA	8755930	8802527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.64	chr12	+	3536	18	ISM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	31461	-319	-4295	27	3prime_fragment	FALSE	canonical	3	62	junction_10	34.8951965245136	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTATTTACAGTGGATG	5796	False	NA	1	True	AATAAA	-13	NA	8755930	8800347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.65	chr12	+	5964	19	ISM	ENSMUSG00000020594.15	ENSMUST00000168361.8	6226	21	31250	49	-4295	-25	3prime_fragment	FALSE	canonical	3	13	junction_14	42.8259469059945	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	5796	False	NA	-11	True	AATAAA	-1	NA	8755930	8802532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.66	chr12	+	5730	18	ISM	ENSMUSG00000020594.15	ENSMUST00000020915.10	3587	20	31786	-2236	-4295	-1	3prime_fragment	FALSE	canonical	3	26	junction_5	42.4679810182296	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATCCCTCTATATCT	5796	False	NA	13	True	AATAAA	-25	NA	8755930	8802556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.67	chr12	+	4904	19	ISM	ENSMUSG00000020594.15	ENSMUST00000168361.8	6226	21	31301	1058	-4244	69	3prime_fragment	FALSE	canonical	3	13	junction_14	42.8259469059945	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTGTTGAAGTCAGTA	5847	False	NA	0	True	GATAAA	-12	NA	8755981	8801523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.68	chr12	+	5518	17	NNC	ENSMUSG00000020594.15	novel	5874	20	NA	NA	-4241	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	53.4879878454032	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCTGGTCTTGTGT	5850	False	NA	9	True	TATAAA	-34	NA	8755984	8802525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8756042_8759321_8759510_8760158_8760326_8763363_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.69	chr12	+	5749	18	NNC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-792	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	62.7621422928688	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATATCCCTCTATATC	9299	False	NA	12	True	AATAAA	-24	NA	8759433	8802555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8759510_8760164_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771670_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.7	chr12	+	5974	21	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	48.7877802323492	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724229	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783411_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.70	chr12	+	3151	16	NNC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	-66	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	51.7644236474778	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAGTTAAGTTGTA	NA	False	NA	-90	True	CATAAA	-16	NA	8760159	8800256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798231_8798391_8798520_8798760_8798954_8799588
ES.7193.71	chr12	+	5011	14	ISM	ENSMUSG00000020594.15	ENSMUST00000165293.8	6218	22	39567	0	3616	0	3prime_fragment	FALSE	canonical	3	62	junction_6	36.7829070156331	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCCCTCTATATCTC	NA	False	NA	14	True	AATAAA	-26	NA	8763841	8802557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.73	chr12	+	5140	13	ISM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	46311	3	-8702	-3	3prime_fragment	FALSE	canonical	3	79	junction_4	38.620662287894	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCCTATGAAAATATTT	NA	False	NA	11	True	ATTAAA	-14	NA	8770444	8801451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.74	chr12	+	4795	12	ISM	ENSMUSG00000020594.15	ENSMUST00000165293.8	6218	22	47388	-4	-7484	0	3prime_fragment	FALSE	canonical	3	62	junction_4	39.2693601250148	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	206	False	NA	18	True	AATAAA	-30	NA	8771662	8802561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.75	chr12	+	4849	12	ISM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	49821	40	-5102	-36	3prime_fragment	FALSE	canonical	3	79	junction_3	38.4561572840794	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAATAAACCTGGTCTT	2588	False	NA	5	True	TATAAA	-30	NA	8774044	8802521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.76	chr12	+	1437	1	NIC	ENSMUSG00000020594.15	novel	4984	21	NA	NA	4330	-9482	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTAGGTGTCTGTAAT	8905	False	NA	NA	False	AATAAA	-14	NA	8783476	8784913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8783500_8784900
ES.7193.77	chr12	+	10226	8	ISM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	62372	1	-6970	-1	3prime_fragment	FALSE	canonical	3	135	junction_2	23.5787867303106	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCTATGAAAATATTTTG	NA	False	NA	13	True	ATTAAA	-16	NA	8786505	8801453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.78	chr12	+	4240	6	NIC	ENSMUSG00000020594.15	novel	5874	20	NA	NA	-2062	32	intron_retention	FALSE	canonical	1	1	junction_3	66.3638455787487	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACAGTGGATGTGGTT	693	False	NA	6	True	AATAAA	-18	NA	8791413	8800352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8794029_8794336_8794467_8794614_8794744_8798110_8798520_8798760_8798954_8799588
ES.7193.79	chr12	+	4045	8	ISM	ENSMUSG00000020594.15	ENSMUST00000165293.8	6218	22	69485	31	284	-31	3prime_fragment	FALSE	canonical	3	135	junction_2	23.5787867303106	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCTGGTCTTGTGTT	1323	False	NA	10	True	TATAAA	-35	NA	8793759	8802526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.8	chr12	+	5873	20	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.080384894077	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCTGATTACATCACT	NA	False	NA	40	True	GATAAA	-24	NA	8724230	8802583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724265_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.80	chr12	+	4532	7	ISM	ENSMUSG00000020594.15	ENSMUST00000165293.8	6218	22	69662	2	461	-2	intron_retention	FALSE	canonical	3	135	junction_2	19.7118125892967	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATATCCCTCTATATC	1500	False	NA	12	True	AATAAA	-24	NA	8793936	8802555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760
ES.7193.81	chr12	+	177	1	Intergenic	novelGene_5836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAACAAAACAAAC	4354	False	NA	NA	False	NA	NA	NA	8796790	8796967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8796800_8797000
ES.7193.82	chr12	+	3564	5	ISM	ENSMUSG00000020594.15	ENSMUST00000168361.8	6226	21	72472	12	3677	8	3prime_fragment	FALSE	canonical	3	151	junction_3	18.389874931603	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTCTGTCAAGAGTGC	4716	False	NA	26	True	AATAAA	-38	NA	8797152	8802569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7193.83	chr12	+	2414	1	NIC	ENSMUSG00000020594.15	novel	4984	21	NA	NA	4203	64	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAATATTTTAATAAACT	5242	False	NA	NA	False	TTTAAA	-8	NA	8797678	8800092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8797700_8800100
ES.7193.9	chr12	+	5842	20	NNC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	8	-25	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50.101835353779	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	NA	False	NA	-11	True	AATAAA	-1	NA	8724231	8802532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8724289_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ES.7194.1	chr12	-	207	1	Intergenic	novelGene_5833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGACAGGAAGATCACAG	NA	False	NA	NA	False	NA	NA	NA	8717103	8716896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8716900_8717100
ES.7194.2	chr12	-	177	2	Antisense	novelGene_ENSMUSG00000020594.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8773076	8716924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_8717073_8773047
ES.7194.3	chr12	-	171	1	Intergenic	novelGene_5834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	8718646	8718475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8718500_8718600
ES.7195.1	chr12	-	1458	1	Intergenic	novelGene_5835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCACAAAACCTTAGGAAA	NA	False	NA	NA	False	NA	NA	NA	8789113	8787655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8787700_8789100
ES.7196.1	chr12	-	506	1	Antisense	novelGene_ENSMUSG00000020594.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAACCTCACAATACAG	NA	False	NA	NA	False	NA	NA	NA	8798790	8798284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_8798300_8798800
ES.7197.1	chr12	-	176	1	Intergenic	novelGene_5837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	8818936	8818760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8818800_8818900
ES.7198.1	chr12	+	2564	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	-44	637	-44	16	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTCTGCTTCTTCTTC	NA	False	NA	21	True	AATAAA	-30	NA	8821278	8843078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ES.7198.2	chr12	+	3186	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	-27	-2	-27	2	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTACTTGTGCAGTC	NA	False	NA	NA	False	AATAAA	-30	NA	8821295	8843717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ES.7198.3	chr12	+	2475	5	NNC	ENSMUSG00000020592.15	novel	3157	5	NA	NA	-5	8	intron_retention	FALSE	canonical	0	0	junction_4	103.386108834795	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCTACTGCTTCTGCT	NA	False	NA	13	True	AATAAA	-22	NA	8821317	8843070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841385_8841637
ES.7198.5	chr12	+	3078	6	NNC	ENSMUSG00000020592.15	novel	2311	6	NA	NA	24	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	93.6640806285953	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTTTGGTGTACTTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	8821347	8843712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637_8843241_8843291
ES.7198.6	chr12	+	2897	4	NIC	ENSMUSG00000020592.15	novel	3157	5	NA	NA	29	-1	intron_retention	FALSE	canonical	3	214	junction_3	20.154955277108	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCCTATGAACTCTACT	NA	False	NA	4	True	AATAAA	-13	NA	8821352	8843061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8821702_8839406_8839489_8840384_8841427_8841637
ES.7198.7	chr12	+	2544	6	NIC	ENSMUSG00000020592.15	novel	2311	6	NA	NA	30	1	intron_retention	FALSE	canonical	0	0	junction_1	106.263822630282	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTATGAACTCTACTGC	NA	False	NA	6	True	AATAAA	-15	NA	8821442	8843063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_8821702_8822352_8822512_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ES.7199.1	chr12	+	179	1	Intergenic	novelGene_5838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTAGAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	8887756	8887935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8887800_8887900
ES.72.1	chr1	-	173	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATAATTTTAAACACA	NA	False	NA	NA	False	NA	NA	NA	9878852	9878679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9878700_9878900
ES.720.1	chr1	-	176	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAACACAGTA	7107	False	NA	NA	False	NA	NA	NA	72773709	72773533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72773500_72773700
ES.7200.1	chr12	+	1815	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	-45	3	-45	-3	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCATGTTTATG	NA	False	NA	35	True	AATAAA	-26	NA	8971618	8988739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.11	chr12	+	176	1	Intergenic	novelGene_5840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAAGTC	1708	False	NA	NA	False	NA	NA	NA	8976550	8976726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8976600_8976700
ES.7200.12	chr12	+	3646	6	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	10183	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.447854555939	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCCTTAAATGTGC	7004	False	NA	23	True	AATAAA	-14	NA	8981846	8988727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8984300_8984508_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.13	chr12	+	3011	6	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	10457	-376	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	387.447854555939	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACATTTTAGAGACTTTT	7278	False	NA	NA	False	ATTAAA	-16	NA	8982120	8988366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8984300_8984508_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.2	chr12	+	2004	8	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.485755871768	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATGTGCCTCATGTTT	NA	False	NA	32	True	AATAAA	-23	NA	8971675	8988736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972295_8981627_8981749_8983569_8983819_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.3	chr12	+	957	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	300	516	300	-516	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTCTTGTTTATTTTA	NA	False	NA	13	True	AATAAA	-13	NA	8971963	8988226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.4	chr12	+	4240	6	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	361	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	401.679673371705	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCATGTTTATG	NA	False	NA	35	True	AATAAA	-26	NA	8972024	8988739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972295_8981627_8984300_8984508_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.5	chr12	+	1659	8	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	382	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	451.037036354295	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCCTTAAATGTGC	NA	False	NA	23	True	AATAAA	-14	NA	8972045	8988727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972295_8981627_8981749_8984003_8984287_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.6	chr12	+	3802	8	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	384	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	450.588956992141	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCATGTTTATG	NA	False	NA	35	True	AATAAA	-26	NA	8972047	8988739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972295_8981627_8981749_8982070_8984300_8984508_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.7	chr12	+	4721	6	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	386	-15	intron_retention	FALSE	non_canonical	0	0	junction_2	404.281881859675	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTCCTTAAATGTGC	NA	False	NA	23	True	AATAAA	-14	NA	8972049	8988727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972295_8981627_8984297_8984508_8984773_8984865_8984989_8985986_8986796_8988116
ES.7200.8	chr12	+	1347	7	NNC	ENSMUSG00000020585.5	novel	1773	7	NA	NA	403	-16	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	364.345379489785	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTGTCCTTAAATGTG	NA	False	NA	22	True	AATAAA	-13	NA	8972066	8988726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8972288_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7200.9	chr12	+	996	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	404	373	404	-373	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTAGAGACTTTTTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	8972067	8988369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ES.7201.1	chr12	-	2021	1	Intergenic	novelGene_5839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTTAATTCTAGATTT	NA	False	NA	NA	False	NA	NA	NA	8977105	8975084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_8975100_8977100
ES.7202.1	chr12	+	177	1	Intergenic	novelGene_5841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAACAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8992873	8993050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_8992900_8993000
ES.7203.1	chr12	+	3864	8	NNC	ENSMUSG00000020583.5	novel	3014	8	NA	NA	2	-539	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6.68534797531291	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGGCATGGTTGATGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	8997930	9021489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8998252_9001997_9002565_9005366_9005493_9008789_9008916_9011117_9011244_9013472_9013599_9017628_9017740_9019128
ES.7203.2	chr12	+	5247	7	ISM	ENSMUSG00000020583.5	ENSMUST00000020899.5	3014	8	6	541	6	-541	intron_retention	FALSE	canonical	2	12	junction_5	3.0368111930481	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAACGGCATGGTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	8997934	9021487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_8998252_9001997_9002565_9005366_9005493_9008789_9008916_9011117_9011244_9013472_9013599_9017628
ES.7203.3	chr12	+	2404	8	NNC	ENSMUSG00000020583.5	novel	3014	8	NA	NA	75	-537	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	6.68534797531291	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCATGGTTGATGTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	8998003	9021491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_8998252_9001997_9002565_9005366_9005493_9008789_9008916_9011117_9011244_9013472_9013599_9017628_9017738_9020515
ES.7204.1	chr12	+	4371	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-52	-7	-16	6	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCTGTAGTTATCATC	NA	False	NA	14	True	AATAAA	-21	NA	9023994	9078853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.10	chr12	+	11011	25	NIC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	-15	-515	intron_retention	FALSE	canonical	3	49	junction_5	11.0864657227731	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTCAGTGGTAGCA	NA	False	NA	3	True	AATAAA	-17	NA	9024031	9078331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.11	chr12	+	4356	28	FSM	ENSMUSG00000066643.13	ENSMUST00000085745.13	4501	28	143	2	-12	-1	multi-exon	FALSE	canonical	0	0	junction_10	21.425725854567	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAGTAATGCTGTAG	NA	False	NA	6	True	AATAAA	-13	NA	9024034	9078845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9045639_9045673_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.12	chr12	+	8163	25	NIC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	-12	1	intron_retention	FALSE	canonical	1	2	junction_5	17.4673803130292	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTAATGCTGTAGTTA	NA	False	NA	9	True	AATAAA	-16	NA	9024034	9078848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.14	chr12	+	3767	27	NNC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	2	-515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.525129885818	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCTCAGTGGTAGCA	NA	False	NA	3	True	AATAAA	-17	NA	9024048	9078331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058662_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.15	chr12	+	4292	27	NNC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	2	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.525129885818	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGTAGTTATCATCAAG	NA	False	NA	17	True	AATAAA	-24	NA	9024048	9078856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058662_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.17	chr12	+	3570	22	NIC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	23	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	18.4269102241304	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATTTTGAGTAATGCT	NA	False	NA	2	True	AATAAA	-9	NA	9024081	9078841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.18	chr12	+	4262	26	ISM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	804	0	-18	0	3prime_fragment	FALSE	canonical	3	49	junction_4	11.2977165834517	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAGTAATGCTGTAGT	NA	False	NA	7	True	AATAAA	-14	NA	9024850	9078846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.19	chr12	+	286	1	ISM	ENSMUSG00000066643.13	ENSMUST00000159126.8	2921	10	17335	41	16477	-41	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	9041345	9041631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_9041300_9041600
ES.7204.2	chr12	+	3831	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-32	513	4	-513	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTCAGTGGTAGCATG	NA	False	NA	5	True	AATAAA	-19	NA	9024014	9078333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.20	chr12	+	4768	17	ISM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	20261	2	19439	-2	3prime_fragment	FALSE	canonical	3	52	junction_4	9.3606139622356	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGAGTAATGCTGTA	NA	False	NA	5	True	AATAAA	-12	NA	9044307	9078844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.21	chr12	+	4727	17	NNC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	19452	-2	intron_retention	FALSE	canonical	0	0	junction_6	19.6627821022357	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGAGTAATGCTGTA	NA	False	NA	5	True	AATAAA	-12	NA	9044320	9078844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058662_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.22	chr12	+	4211	17	ISM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	20276	544	19454	-544	3prime_fragment	FALSE	canonical	3	52	junction_4	9.3606139622356	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAATAAAAGTAAAG	NA	False	NA	-26	True	TATAAA	-12	NA	9044322	9078302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.3	chr12	+	3972	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	-31	371	5	-371	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTGTAGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	9024015	9078475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.4	chr12	+	3635	27	NNC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	9	-676	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	17.525129885818	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTACAGTGCTGGAA	NA	False	NA	NA	False	AATAAA	-14	NA	9024019	9078170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058662_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.5	chr12	+	4245	26	NIC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	16	-638	intron_retention	FALSE	canonical	3	49	junction_5	11.4017542509914	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACTGTGTCGTAGAGC	NA	False	NA	NA	False	NA	NA	NA	9024026	9078208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9075043_9077482_9077724_9078005
ES.7204.7	chr12	+	5165	27	NNC	ENSMUSG00000066643.13	novel	4312	27	NA	NA	-16	835	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	17.525129885818	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTATTTACTATGTATA	NA	False	NA	NA	False	TTTAAA	-4	NA	9024030	9079682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062659_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7204.8	chr12	+	3848	28	FSM	ENSMUSG00000066643.13	ENSMUST00000085745.13	4501	28	139	514	-16	-513	multi-exon	FALSE	canonical	0	0	junction_10	21.425725854567	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTCAGTGGTAGCATG	NA	False	NA	5	True	AATAAA	-19	NA	9024030	9078333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9045639_9045673_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ES.7205.1	chr12	+	801	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	-11	210	-11	-210	multi-exon	FALSE	canonical	3	121	junction_2	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTATTCCCAACTTTGT	NA	False	NA	18	True	AGTAAA	-20	NA	9079985	9086184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9080197_9084921_9085089_9085761
ES.7205.2	chr12	+	606	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	42	352	11	-352	multi-exon	FALSE	canonical	3	121	junction_2	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGATCATGTTTGATA	NA	False	NA	NA	False	AGTAAA	-21	NA	9080038	9086042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_9080197_9084921_9085089_9085761
ES.7206.1	chr12	-	4598	1	Antisense	novelGene_ENSMUSG00000066637.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAGGGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	9086580	9081982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_9082000_9086600
ES.7207.1	chr12	-	2653	1	Intergenic	novelGene_5842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	9895688	9893035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_9893000_9895700
ES.7208.1	chr12	+	5670	1	FSM	ENSMUSG00000111942.2	ENSMUST00000217708.2	6092	1	2423	-2001	2423	2001	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTCTGTGCAAACTGT	NA	False	NA	NA	False	NA	NA	NA	10204564	10210234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_10204600_10210200
ES.7208.2	chr12	+	4668	2	Genic_Genomic	ENSMUSG00000111942.2	novel	6092	1	NA	NA	3273	2001	multi-exon	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATTCTGTGCAAACTGT	NA	False	NA	NA	False	NA	NA	NA	10205414	10210234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_10205861_10206012
ES.7209.1	chr12	+	2435	1	Genic_Genomic	ENSMUSG00000020621.7	novel	NA	NA	NA	NA	-4	-2360	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAAGAGTTGAAATTT	NA	False	NA	NA	False	NA	NA	NA	10440767	10443202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_10440800_10443200
ES.7209.3	chr12	+	1478	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	2	0	2	0	multi-exon	FALSE	canonical	3	67	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	False	NA	11	True	AATAAA	-17	NA	10440773	10445562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_10441227_10444537
ES.7209.5	chr12	+	6230	3	NNC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	106	4930	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	33.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTAGCTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-18	NA	10440877	10450492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_10441227_10444537_10446634_10446707
ES.7209.6	chr12	+	2965	1	NIC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	1823	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCAGTGTGCATTTCTT	NA	False	NA	8	True	AATAAA	-14	NA	10442594	10445559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_10442600_10445600
ES.721.1	chr1	-	172	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAGTATTGT	7212	False	NA	NA	False	NA	NA	NA	72798871	72798699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72798700_72798900
ES.7210.1	chr12	-	1762	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-75	-432	-75	432	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCCATCCATAAACTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	10950315	10948553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_10948600_10950300
ES.7210.2	chr12	-	1622	2	Genic_Genomic	ENSMUSG00000066632.4	novel	1255	1	NA	NA	-73	414	multi-exon	FALSE	canonical	0	0	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAAAAAAAAAATC	NA	False	NA	NA	False	AATAAA	-11	NA	10950313	10948571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_10949602_10949721
ES.7210.3	chr12	-	1544	2	Genic_Genomic	ENSMUSG00000066632.4	novel	1255	1	NA	NA	-73	414	multi-exon	FALSE	canonical	1	33	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATGAAAAAAAAAAAATC	NA	False	NA	NA	False	AATAAA	-11	NA	10950313	10948571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_10949128_10949325
ES.7210.4	chr12	-	1536	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-208	-73	208	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTGTGCATTGTAG	NA	False	NA	NA	False	TTTAAA	-14	NA	10950313	10948777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_10948800_10950300
ES.7211.1	chr12	+	182	1	Intergenic	novelGene_5843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGAGTCAGAATCCGG	NA	False	NA	NA	False	NA	NA	NA	11133459	11133641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_11133500_11133600
ES.7212.1	chr12	+	292	1	Intergenic	novelGene_5846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTAGAAAGCTACCAGA	NA	False	NA	NA	False	NA	NA	NA	11197950	11198242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_11198000_11198200
ES.7212.2	chr12	+	175	1	Intergenic	novelGene_5847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	11197951	11198126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_11198000_11198100
ES.7213.1	chr12	-	2414	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	-17	536	-17	-1	multi-exon	FALSE	canonical	3	56	junction_1	7	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTGTTTCTATGTTC	3990	False	NA	0	True	AATAAA	-20	NA	11200391	11140738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11142757_11169759_11169950_11200185
ES.7213.10	chr12	-	2397	4	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	27	-266	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.3986531642978	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGAGAGAGTTGTAATA	4034	False	NA	NA	False	ATTAAA	-26	NA	11200347	11141006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11192841_11193137_11200185
ES.7213.11	chr12	-	2128	3	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	666	-272	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	27	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTACAAGAGAGAGTT	4673	False	NA	NA	False	ATTAAA	-20	NA	11199708	11141012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11199514
ES.7213.12	chr12	-	169	1	Intergenic	novelGene_5844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGGTGCACACATT	NA	False	NA	NA	False	NA	NA	NA	11171850	11171681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_11171700_11171800
ES.7213.13	chr12	-	177	1	Intergenic	novelGene_5845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAAAACCTGAT	NA	False	NA	NA	False	NA	NA	NA	11174404	11174227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_11174200_11174400
ES.7213.2	chr12	-	2259	3	FSM	ENSMUSG00000043673.12	ENSMUST00000164495.9	2332	3	74	-1	74	1	multi-exon	FALSE	canonical	0	0	junction_2	28	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTTGTTTCTATGTT	3612	False	NA	-1	True	AATAAA	-19	NA	11200769	11140739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11142757_11169759_11169950_11200717
ES.7213.3	chr12	-	2123	2	NIC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	82	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCCTTGTTTCTATGT	4089	False	NA	-2	True	AATAAA	-18	NA	11200292	11140740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11142757_11200185
ES.7213.4	chr12	-	2330	3	NNC	ENSMUSG00000043673.12	novel	2332	3	NA	NA	736	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	27	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCCTTGTTTCTATGT	4743	False	NA	-2	True	AATAAA	-18	NA	11199638	11140740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11199514
ES.7213.5	chr12	-	2549	5	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22474487139159	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCCTTGTTTCTATG	4045	False	NA	-3	True	AATAAA	-17	NA	11200336	11140741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11165173_11165267_11169759_11169950_11178388_11178489_11200185
ES.7213.6	chr12	-	2451	4	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	277	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.3986531642978	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCCTTGTTTCTATG	4284	False	NA	-3	True	AATAAA	-17	NA	11200097	11140741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11171475_11171580_11199955
ES.7213.7	chr12	-	2558	5	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	40	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.2487113059643	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCCTTGTTTCTATG	4047	False	NA	-3	True	AATAAA	-17	NA	11200334	11140741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11171475_11171580_11178388_11178489_11200185
ES.7213.8	chr12	-	2743	5	NNC	ENSMUSG00000043673.12	novel	2933	3	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.847169643377	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGACTGCCTTGTTTCTA	4051	False	NA	-5	True	AATAAA	-15	NA	11200330	11140743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11142757_11169759_11169950_11178388_11178489_11192841_11193137_11200185
ES.7213.9	chr12	-	2138	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	-6	801	-6	-263	multi-exon	FALSE	canonical	3	56	junction_1	7	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGAGTTGTAATACGG	4001	False	NA	NA	False	ATTAAA	-29	NA	11200380	11141003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11142757_11169759_11169950_11200185
ES.7214.1	chr12	+	173	1	Intergenic	novelGene_5848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAACAACAACAACAC	NA	False	NA	NA	False	NA	NA	NA	11249918	11250091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_11249900_11250100
ES.7215.1	chr12	-	218	1	Intergenic	novelGene_5849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTACAGACATGGACAG	NA	False	NA	NA	False	NA	NA	NA	11275618	11275400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_11275400_11275600
ES.7216.1	chr12	+	175	1	Intergenic	novelGene_5850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATACATAAATG	1314	False	NA	NA	False	NA	NA	NA	11283680	11283855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_11283700_11283900
ES.7217.1	chr12	+	3350	24	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	-57	10524	-57	-8782	5prime_fragment	TRUE	canonical	3	574	junction_19	47.7419813831539	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAATTTTGATCACA	4260	False	NA	NA	False	NA	NA	NA	11315829	11359262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199
ES.7217.100	chr12	+	4066	28	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	5	201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	182.229268156461	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4605	False	NA	12	True	AATAAA	-13	NA	11316174	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11320509_11320802_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.103	chr12	+	3785	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	11	201	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_23	139.38213722538	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4611	False	NA	12	True	AATAAA	-13	NA	11316180	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356222_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.106	chr12	+	6053	28	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	183.453817499138	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAAGGTCATGCTTTT	4635	False	NA	NA	False	AATAAA	-19	NA	11316204	11369782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11354515_11355288_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.107	chr12	+	8066	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	23	0	intron_retention	FALSE	canonical	0	0	junction_16	141.017729381805	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4655	False	NA	NA	False	AATAAA	-23	NA	11316224	11369786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11344601_11344923_11345085_11347103_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.109	chr12	+	5768	19	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	-7698	203	intron_retention	FALSE	canonical	3	574	junction_11	50.4427618417372	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	6909	False	NA	14	True	AATAAA	-15	NA	11333071	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.11	chr12	+	3797	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-15	143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	139.063504500727	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGGGTTTGTTTCTA	4521	False	NA	-46	True	AGTAAA	-33	NA	11316090	11368187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329734_11330335_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.110	chr12	+	3744	1	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-5459	1399	mono-exon	FALSE	NA	NA	NA	NA	NA	694	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCATAATTTTTATCTT	9148	False	NA	NA	False	AATAAA	-18	NA	11335310	11339054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11335300_11339100
ES.7217.111	chr12	+	2459	15	ISM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	23785	1533	-879	203	3prime_fragment	FALSE	canonical	3	574	junction_7	53.8565744570233	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	NA	False	NA	14	True	AATAAA	-15	NA	11339890	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.112	chr12	+	5562	13	NNC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	66	2	intron_retention	FALSE	canonical	1	3	junction_2	190.644520858412	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAAGGTCATGCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	11340835	11369782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11340893_11341526_11341732_11344487_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11366718_11367770
ES.7217.113	chr12	+	6635	3	ISM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	29443	15705	1025	4654	intron_retention	FALSE	canonical	3	574	junction_2	46.5	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	11345548	11354075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11347287_11348262_11348344_11349259
ES.7217.114	chr12	+	6472	2	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	2164	4654	intron_retention	FALSE	canonical	3	574	junction_1	0	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	11346687	11354075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11348344_11349259
ES.7217.115	chr12	+	1469	4	ISM	ENSMUSG00000020608.8	ENSMUST00000218319.2	3470	8	7906	1541	-6142	201	3prime_fragment	FALSE	canonical	3	733	junction_3	5.24933858267454	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	NA	False	NA	12	True	AATAAA	-13	NA	11358562	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.116	chr12	+	2825	3	NIC	ENSMUSG00000020608.8	novel	3470	8	NA	NA	-5636	204	intron_retention	FALSE	canonical	3	733	junction_2	5	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	NA	False	NA	15	True	AATAAA	-16	NA	11359068	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11359306_11364607_11366718_11367770
ES.7217.117	chr12	+	4532	3	ISM	ENSMUSG00000020608.8	ENSMUST00000218319.2	3470	8	11679	7	-2369	-1	3prime_fragment	FALSE	canonical	3	733	junction_2	6	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAATTAAGGTCATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	11362335	11369779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11364761_11366619_11366718_11367770
ES.7217.118	chr12	+	2868	3	ISM	ENSMUSG00000020608.8	ENSMUST00000218319.2	3470	8	11811	1539	-2237	203	3prime_fragment	FALSE	canonical	3	733	junction_2	6	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	NA	False	NA	14	True	AATAAA	-15	NA	11362467	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11364761_11366619_11366718_11367770
ES.7217.119	chr12	+	3834	2	NIC	ENSMUSG00000020608.8	novel	470	4	NA	NA	-1346	201	intron_retention	FALSE	canonical	3	733	junction_1	0	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	NA	False	NA	12	True	AATAAA	-13	NA	11363358	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11366718_11367770
ES.7217.12	chr12	+	3991	28	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-12	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	183.572578650443	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4524	False	NA	14	True	AATAAA	-15	NA	11316093	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11331506_11331641_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.13	chr12	+	5290	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	-12	-6	-12	0	multi-exon	FALSE	canonical	3	71	junction_3	127.798754297528	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4524	False	NA	NA	False	AATAAA	-23	NA	11316093	11369786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.15	chr12	+	3841	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-9	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	138.200335890463	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4527	False	NA	12	True	AATAAA	-13	NA	11316096	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350582_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.18	chr12	+	4053	9	NIC	ENSMUSG00000020608.8	novel	3373	10	NA	NA	-5	-1274	intron_retention	FALSE	canonical	3	624	junction_2	46.1734163236813	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTCTGTTTAATTT	4531	False	NA	NA	False	NA	NA	NA	11316100	11336381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11335219_11335311
ES.7217.2	chr12	+	4133	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	-17	1487	-17	255	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAACA	4300	False	NA	66	True	AAAAAG	-11	NA	11315869	11368299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.20	chr12	+	1425	1	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-1	-3203	mono-exon	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAAGTAGTTGTCTGA	4535	False	NA	NA	False	NA	NA	NA	11316104	11317529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316100_11317500
ES.7217.21	chr12	+	3641	25	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	201	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	143.147626789813	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4539	False	NA	12	True	AATAAA	-13	NA	11316108	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.23	chr12	+	5157	25	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4539	False	NA	NA	False	AATAAA	-23	NA	11316108	11369786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.25	chr12	+	4636	26	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	204	intron_retention	FALSE	canonical	2	43	junction_15	133.111598292561	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4539	False	NA	15	True	AATAAA	-16	NA	11316108	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341712_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.27	chr12	+	3448	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	4	34	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTTGTTTGCTTTGGA	4540	False	NA	NA	False	TTTAAA	-6	NA	11316109	11368078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.28	chr12	+	3819	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	201	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_15	130.713404373233	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4540	False	NA	12	True	AATAAA	-13	NA	11316109	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341712_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.29	chr12	+	3181	23	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	149.171465210535	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4540	False	NA	14	True	AATAAA	-15	NA	11316109	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11359278_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.3	chr12	+	3704	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	-82	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4454	False	NA	15	True	AATAAA	-16	NA	11316023	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.30	chr12	+	5231	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	-2	combination_of_known_splicesites	FALSE	canonical	2	19	junction_10	138.231434919847	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGGTCATGCTTTTGT	4540	False	NA	NA	False	AATAAA	-21	NA	11316109	11369784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.31	chr12	+	3888	27	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	203	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	139.27392021506	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4540	False	NA	14	True	AATAAA	-15	NA	11316109	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347103_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.33	chr12	+	3724	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	201	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_15	172.405844297486	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4540	False	NA	12	True	AATAAA	-13	NA	11316109	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341712_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364666_11366619_11366718_11367770
ES.7217.34	chr12	+	3782	28	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	136.820509616986	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4540	False	NA	12	True	AATAAA	-13	NA	11316109	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341643_11341699_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.35	chr12	+	3454	23	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	5	203	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	200.388836890714	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4541	False	NA	14	True	AATAAA	-15	NA	11316110	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.36	chr12	+	4893	26	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	224	1539	5	203	intron_retention	FALSE	canonical	3	574	junction_19	50.436272661647	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4541	False	NA	14	True	AATAAA	-15	NA	11316110	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619
ES.7217.38	chr12	+	3408	23	NNC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	5	201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	187.964306660899	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4541	False	NA	12	True	AATAAA	-13	NA	11316110	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345096_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.4	chr12	+	1659	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-55	1769	-31	-1769	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTGTATCTGCAAGT	4505	False	NA	NA	False	ATTAAA	-11	NA	11316074	11335886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.41	chr12	+	3530	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	7	-49	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	139.38213722538	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATCGCTTGTGTAAA	4543	False	NA	NA	False	AATAAA	-16	NA	11316112	11367995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356167_11359217_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.42	chr12	+	2423	19	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	227	21442	8	1058	5prime_fragment	FALSE	canonical	3	606	junction_10	45.1079637654121	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATACTTTTCTTCAATT	4544	False	NA	NA	False	AATATA	-35	NA	11316113	11348344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262
ES.7217.43	chr12	+	3689	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	9	203	combination_of_known_splicesites	FALSE	canonical	2	19	junction_10	138.231434919847	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4545	False	NA	14	True	AATAAA	-15	NA	11316114	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.44	chr12	+	3695	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	9	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	186.558904510267	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4545	False	NA	12	True	AATAAA	-13	NA	11316114	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333102_11335112_11335166_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.45	chr12	+	3784	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	9	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	139.264408388457	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4545	False	NA	12	True	AATAAA	-13	NA	11316114	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339231_11339642_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.47	chr12	+	2110	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-13	1276	11	-1276	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGATTCTGTTTAAT	4547	False	NA	NA	False	NA	NA	NA	11316116	11336379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.48	chr12	+	3713	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-12	201	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	141.720705614952	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4548	False	NA	12	True	AATAAA	-13	NA	11316117	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.5	chr12	+	3801	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	193	1609	-26	133	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTGTTCAGTTTGGG	4510	False	NA	-56	True	AGTAAA	-23	NA	11316079	11368177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.50	chr12	+	5254	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	141.720705614952	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4548	False	NA	NA	False	AATAAA	-23	NA	11316117	11369786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.51	chr12	+	3656	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	-12	-271	-12	271	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTACTATTATCTTGTT	4548	False	NA	NA	False	AATAAA	-17	NA	11316117	11337926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.52	chr12	+	5270	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_25	128.991198497963	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAATTAAGGTCATGCT	4548	False	NA	NA	False	AATAAA	-16	NA	11316117	11369779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364666_11366619_11366718_11367770
ES.7217.55	chr12	+	3821	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-12	201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	139.27392021506	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4548	False	NA	12	True	AATAAA	-13	NA	11316117	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347160_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.56	chr12	+	5363	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	138.404416636098	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGGTCATGCTTTTGT	4549	False	NA	NA	False	AATAAA	-21	NA	11316118	11369784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341726_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.6	chr12	+	3763	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	-23	1532	-23	204	multi-exon	FALSE	canonical	3	71	junction_3	127.798754297528	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4513	False	NA	15	True	AATAAA	-16	NA	11316082	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.61	chr12	+	5405	27	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	139.27392021506	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAAGGTCATGCTTTT	4558	False	NA	NA	False	AATAAA	-19	NA	11316127	11369782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347103_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.62	chr12	+	3790	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-2	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	139.27392021506	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4558	False	NA	12	True	AATAAA	-13	NA	11316127	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345042_11347138_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.64	chr12	+	1718	8	NIC	ENSMUSG00000020608.8	novel	3373	10	NA	NA	-1	-1432	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	207.697877127488	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACTCACCTGATACTAAA	4559	False	NA	NA	False	ATTAAA	-13	NA	11316128	11336223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.66	chr12	+	3666	14	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	252.862546565563	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAAGGTCATGCTTTT	4560	False	NA	NA	False	AATAAA	-19	NA	11316129	11369782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11347150_11347259_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.68	chr12	+	3725	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	1	204	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_25	128.991198497963	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4562	False	NA	15	True	AATAAA	-16	NA	11316131	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364666_11366619_11366718_11367770
ES.7217.7	chr12	+	5404	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	199	0	-20	0	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4516	False	NA	NA	False	AATAAA	-23	NA	11316085	11369786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.70	chr12	+	3567	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	245	1791	1	-49	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCATCGCTTGTGTAAA	4562	False	NA	NA	False	AATAAA	-16	NA	11316131	11367995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.71	chr12	+	4523	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	1	204	intron_retention	FALSE	canonical	0	0	junction_16	142.007042078905	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4562	False	NA	15	True	AATAAA	-16	NA	11316131	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347103_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.72	chr12	+	3813	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	1	204	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	139.063504500727	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4562	False	NA	15	True	AATAAA	-16	NA	11316131	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329747_11330352_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.74	chr12	+	3857	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	1	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	139.397419389831	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4562	False	NA	14	True	AATAAA	-15	NA	11316131	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340675_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.76	chr12	+	4810	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	2	-317	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGAAGAAGTTTGAG	4563	False	NA	NA	False	AATAAA	-33	NA	11316132	11369463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.77	chr12	+	3572	25	NNC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	2	201	at_least_one_novel_splicesite	FALSE	canonical	2	43	junction_13	172.932710099108	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4563	False	NA	12	True	AATAAA	-13	NA	11316132	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341712_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.81	chr12	+	3793	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	6	201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	139.063504500727	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4567	False	NA	12	True	AATAAA	-13	NA	11316136	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330360_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.82	chr12	+	4762	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	8	-1397	7	1397	multi-exon	FALSE	canonical	3	624	junction_2	43.5943704599856	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTCATAATTTTTATC	4568	False	NA	NA	False	AATAAA	-16	NA	11316137	11339052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.83	chr12	+	6512	12	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	7	-3541	intron_retention	FALSE	canonical	3	606	junction_9	39.520054538725	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTACCTTTGGTTCTTT	4568	False	NA	NA	False	AGTAAA	-12	NA	11316137	11342103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339727_11339892_11340058_11340713
ES.7217.84	chr12	+	4091	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	9	204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	139.153468766763	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4570	False	NA	15	True	AATAAA	-16	NA	11316139	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335690_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.85	chr12	+	3671	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	19	201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	139.27392021506	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4580	False	NA	12	True	AATAAA	-13	NA	11316149	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11344976_11347169_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.86	chr12	+	3784	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-19	201	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_23	219.116113742863	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTGTGTTTCCAGG	4581	False	NA	12	True	AATAAA	-13	NA	11316150	11368245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359201_11359298_11364602_11364766_11366633_11366718_11367770
ES.7217.87	chr12	+	3797	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-18	203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	138.173503826759	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4582	False	NA	14	True	AATAAA	-15	NA	11316151	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359310_11364613_11364761_11366619_11366718_11367770
ES.7217.88	chr12	+	3480	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-18	31	combination_of_known_splicesites	FALSE	canonical	2	19	junction_10	138.231434919847	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATGTTTGTTTGCTTT	4582	False	NA	NA	False	TTTAAA	-3	NA	11316151	11368075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.9	chr12	+	5080	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	200	323	-19	-317	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGAAGAAGTTTGAG	4517	False	NA	NA	False	AATAAA	-33	NA	11316086	11369463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.90	chr12	+	4569	28	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	-15	204	combination_of_known_junctions	FALSE	canonical	1	1	junction_22	183.453817499138	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4585	False	NA	15	True	AATAAA	-16	NA	11316154	11368248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11354515_11355288_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.91	chr12	+	1267	8	NNC	ENSMUSG00000020608.8	novel	3373	10	NA	NA	-11	-1851	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	289.079538521558	697	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGTTCATAGAGTTT	4589	False	NA	NA	False	AATAAA	-25	NA	11316158	11335804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11329605_11329741_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ES.7217.94	chr12	+	3611	26	NNC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	-4	203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	180.169147192298	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTGTTTCCAGGTT	4596	False	NA	14	True	AATAAA	-15	NA	11316165	11368247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351601_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.95	chr12	+	5039	20	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	1	4690	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	135.116344654515	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAAATAGAGT	4601	False	NA	NA	False	NA	NA	NA	11316170	11354111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522
ES.7217.97	chr12	+	7014	26	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	202	intron_retention	FALSE	canonical	1	3	junction_14	139.034119553439	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGTGTTTCCAGGT	4603	False	NA	13	True	AATAAA	-14	NA	11316172	11368246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344487_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.98	chr12	+	5320	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	3	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.332458614885	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAAGGTCATGCTTTTG	4603	False	NA	NA	False	AATAAA	-20	NA	11316172	11369783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323988_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7217.99	chr12	+	3957	28	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	4	198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	183.786779303936	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGATGTTTTGTGTTTCC	4604	False	NA	9	True	AATAAA	-10	NA	11316173	11368242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11335504_11335690_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ES.7218.1	chr12	-	3868	1	Genic_Genomic	ENSMUSG00000051235.11	novel	NA	NA	NA	NA	10251	2185	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGTCGTCTGGACTCC	NA	False	NA	NA	False	AATAAA	-19	NA	11290603	11286735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_11286700_11290600
ES.7218.10	chr12	-	3912	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-18	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.4212716701633	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGTTCATGTAAGAATG	NA	False	NA	-14	True	NA	NA	NA	11315820	11288938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289596_11290852_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315721
ES.7218.11	chr12	-	4038	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-10	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8993355310596	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGTTCATGTAAGAATG	NA	False	NA	-14	True	NA	NA	NA	11315812	11288938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289596_11290852_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.12	chr12	-	3936	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-8	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.4411442573136	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGTTCATGTAAGAATG	NA	False	NA	-14	True	NA	NA	NA	11315775	11288938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289598_11290854_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311005_11312407_11312595_11315587
ES.7218.13	chr12	-	5226	14	NIC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-6	-18	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.9029146746226	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGTTCATGTAAGAATG	NA	False	NA	-14	True	NA	NA	NA	11315808	11288938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311005_11312407_11312595_11315587
ES.7218.14	chr12	-	3653	13	NNC	ENSMUSG00000051235.11	novel	2462	13	NA	NA	0	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.9046471310911	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTCATGTAAGAAT	NA	False	NA	-15	True	NA	NA	NA	11315802	11288939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289596_11290852_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11315587
ES.7218.15	chr12	-	4508	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-38	798	-3	23	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCAGTGGTGGCGCAC	NA	False	NA	NA	False	ATTAAA	-43	NA	11315805	11289718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.16	chr12	-	3446	14	NIC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-6	-908	combination_of_known_junctions	FALSE	canonical	1	2	junction_13	12.9111666727709	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTCTAAAGCATTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	11315808	11290649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315721
ES.7218.17	chr12	-	3573	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-41	1736	-6	914	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTCTTGTATGTCTAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	11315808	11290656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.18	chr12	-	3310	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-50	2008	-15	642	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAATGTCTTTATTA	NA	False	NA	NA	False	AATATA	-20	NA	11315817	11290928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.19	chr12	-	3909	13	NIC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-4	639	intron_retention	FALSE	canonical	3	36	junction_1	6.1913918736689	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTTGAAATGTCTTTA	NA	False	NA	NA	False	AATATA	-17	NA	11315806	11290931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.2	chr12	-	6785	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	1	1381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.7836133055645	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGCCTTCATAATCATT	NA	False	NA	NA	False	NA	NA	NA	11315797	11287539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306200_11306307_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.20	chr12	-	3219	14	NIC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-3	638	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	12.9029146746226	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTTGAAATGTCTTT	NA	False	NA	NA	False	AATATA	-16	NA	11315795	11290932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311005_11312407_11312595_11315587
ES.7218.21	chr12	-	6273	13	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	0	638	intron_retention	FALSE	non_canonical	0	0	junction_9	13.9251471167174	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTCTTGAAATGTCTTT	NA	False	NA	NA	False	AATATA	-16	NA	11315792	11290932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305158_11305269_11306838_11307016_11310882_11311070_11312407
ES.7218.23	chr12	-	3808	14	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-231	637	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	13.1477718768407	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTCTTGAAATGTCTT	9879	False	NA	NA	False	AATATA	-15	NA	11316033	11290933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315300
ES.7218.26	chr12	-	3149	13	NIC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-8	634	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	13.6371632762178	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTATTCTTGAAATGT	NA	False	NA	NA	False	AATATA	-12	NA	11315775	11290936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.27	chr12	-	3255	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	0	634	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.2538785367015	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTATTCTTGAAATGT	NA	False	NA	NA	False	AATATA	-12	NA	11315798	11290936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306200_11306307_11306838_11307016_11310882_11311070_11312407_11312595_11315721
ES.7218.28	chr12	-	1909	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-8	3367	-8	-717	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGTAGTCAGCCCAG	NA	False	NA	NA	False	AGTAAA	-22	NA	11315775	11292287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.29	chr12	-	2410	13	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-231	3702	-196	-1052	5prime_fragment	FALSE	canonical	3	36	junction_1	6.1913918736689	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGAAAGACATTT	9914	False	NA	NA	False	NA	NA	NA	11315998	11292622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.3	chr12	-	5311	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-46	3	-11	-3	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATTTTAATCCTTACC	NA	False	NA	1	True	NA	NA	NA	11315813	11288923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.30	chr12	-	1714	11	ISM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-49	9035	-14	-214	5prime_fragment	FALSE	canonical	3	39	junction_8	5.88302643203309	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	11315816	11297955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.31	chr12	-	774	8	ISM	ENSMUSG00000051235.11	ENSMUST00000218487.2	2462	13	4833	7589	4802	-1418	internal_fragment	FALSE	canonical	3	39	junction_7	6.18094504365255	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAGACCTGATTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	11310965	11299159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882
ES.7218.32	chr12	-	11323	3	ISM	ENSMUSG00000051235.11	ENSMUST00000218487.2	2462	13	-10	10613	-6	-4442	intron_retention	FALSE	canonical	3	40	junction_1	5.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-42	NA	11315808	11302183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_11304426_11305157_11305269_11306838
ES.7218.33	chr12	-	7800	1	Genic_Genomic	ENSMUSG00000051235.11	novel	NA	NA	NA	NA	-6	-1081	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11315808	11308008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_11308000_11315800
ES.7218.34	chr12	-	5857	2	NNC	ENSMUSG00000051235.11	novel	629	2	NA	NA	-3	1483	intron_retention	TRUE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGAAATTCTAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	11315795	11309405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11311336_11311868
ES.7218.5	chr12	-	4026	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8993355310596	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGATTTTAATCCTTA	NA	False	NA	-1	True	NA	NA	NA	11315787	11288925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289598_11290854_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.6	chr12	-	3914	14	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.0311236152414	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATGATTTTAATCCTT	NA	False	NA	-2	True	NA	NA	NA	11315787	11288926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289596_11290852_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7218.7	chr12	-	4133	4	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-14	-10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.3448241713959	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTAAGAATGATTTTAAT	NA	False	NA	-6	True	NA	NA	NA	11315816	11288930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289612_11308033_11311070_11312407_11312595_11315587
ES.7218.8	chr12	-	2051	2	NNC	ENSMUSG00000051235.11	novel	4198	12	NA	NA	8948	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTTCATGTAAGAATGA	NA	False	NA	-13	True	NA	NA	NA	11291906	11288937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289928_11290845
ES.7218.9	chr12	-	4057	15	NNC	ENSMUSG00000051235.11	novel	5268	14	NA	NA	-3	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.8993355310596	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGTTCATGTAAGAATG	NA	False	NA	-14	True	NA	NA	NA	11315795	11288938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_11289623_11290843_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ES.7219.1	chr12	-	178	1	Antisense	novelGene_ENSMUSG00000020608.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAACCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	11342307	11342129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_11342100_11342300
ES.722.1	chr1	+	3196	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAGTATCTATATTAT	NA	False	NA	NA	False	NA	NA	NA	72803894	72807090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72803900_72807100
ES.722.2	chr1	+	3746	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTATACTTGCAAATAC	NA	False	NA	NA	False	AATAAA	-19	NA	72803911	72807657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72803900_72807700
ES.7220.1	chr12	-	5830	1	Antisense	novelGene_ENSMUSG00000020608.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGGCTATTTTAATAC	NA	False	NA	NA	False	NA	NA	NA	11367373	11361543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_11361500_11367400
ES.7221.1	chr12	-	165	1	Intergenic	novelGene_5851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	11773467	11773302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_11773300_11773500
ES.7222.1	chr12	+	690	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	-29	-47	-29	47	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	12073016	12073706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12073000_12073700
ES.7223.1	chr12	+	175	1	Intergenic	novelGene_5852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCACAATCAATCAA	NA	False	NA	NA	False	NA	NA	NA	12127269	12127444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_12127300_12127400
ES.7224.1	chr12	-	1428	3	Intergenic	novelGene_5853	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCTTTGGCAATATACA	NA	False	NA	NA	False	AATAAA	-17	NA	12228039	12224921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_12226037_12226396_12226508_12227837
ES.7225.1	chr12	+	4876	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	-26	4602	-26	2968	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312113	12426364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.10	chr12	+	177	1	Intergenic	novelGene_5854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	12330007	12330184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_12330000_12330200
ES.7225.2	chr12	+	4804	13	NNC	ENSMUSG00000020589.18	novel	9452	13	NA	NA	-11	2959	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	34.0370508906593	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAAAATCATGTTTGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	12312128	12426355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_12312240_12326343_12326369_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.3	chr12	+	1418	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-44	397	-6	-341	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGATGTCTGAAGCGA	NA	False	NA	15	True	CATAAA	-17	NA	12312133	12422999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.4	chr12	+	4771	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-32	-2968	6	2968	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312145	12426364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.6	chr12	+	3623	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	-23	-1829	-15	1829	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGCTTAGGACATTTGT	NA	False	NA	NA	False	NA	NA	NA	12312154	12425225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.7	chr12	+	4886	13	NNC	ENSMUSG00000020589.18	novel	1771	12	NA	NA	0	2968	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.4702123504771	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312177	12426364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_12312240_12345981_12346129_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.8	chr12	+	4812	13	FSM	ENSMUSG00000020589.18	ENSMUST00000223061.2	1782	13	-6	-3024	0	2968	multi-exon	FALSE	canonical	0	0	junction_1	36.4702123504771	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312177	12426364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12345616_12345690_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7225.9	chr12	+	1514	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	10	247	-2	-191	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGTATAGTTTATAGAA	NA	False	NA	NA	False	NA	NA	NA	12312187	12423149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ES.7226.1	chr12	+	174	1	Intergenic	novelGene_5855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAAGGCCTTAG	NA	False	NA	NA	False	NA	NA	NA	12720816	12720990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_12720800_12721000
ES.7227.1	chr12	+	4454	5	NNC	ENSMUSG00000091430.2	novel	1466	2	NA	NA	-3467	6004	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.433012701892219	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTCCATCCAGT	6466	False	NA	NA	False	AATAAA	-12	NA	12834518	12850290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_12834651_12842920_12844422_12846218_12846654_12847676_12848321_12848548
ES.7228.1	chr12	-	970	2	Intergenic	novelGene_5856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTCATAGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	12837497	12796562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_12797512_12837476
ES.7229.1	chr12	-	235	1	Intergenic	novelGene_5857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGGTAGATA	NA	False	NA	NA	False	NA	NA	NA	12839721	12839486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_12839500_12839700
ES.723.1	chr1	+	882	4	NNC	ENSMUSG00000039323.19	novel	906	3	NA	NA	-654	-4	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	1672.39096970641	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	636	False	NA	7	True	ATTAAA	-7	NA	72863007	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72863056_72888244_72888472_72888722_72888864_72891156
ES.723.10	chr1	+	1236	4	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	67	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1700.94725243188	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	1357	False	NA	7	True	ATTAAA	-7	NA	72863728	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72864124_72888244_72888479_72888722_72888864_72891156
ES.723.11	chr1	+	948	5	NNC	ENSMUSG00000039323.19	novel	991	4	NA	NA	-374	-4	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	1778.73178135434	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	199	False	NA	7	True	ATTAAA	-7	NA	72864106	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72864124_72864536_72864634_72888244_72888472_72888722_72888864_72891156
ES.723.12	chr1	+	1321	4	FSM	ENSMUSG00000039323.19	ENSMUST00000120564.2	991	4	-334	4	-334	-4	multi-exon	FALSE	canonical	3	27	junction_1	1673.33041168404	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	239	False	NA	7	True	ATTAAA	-7	NA	72864146	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72864634_72888244_72888472_72888722_72888864_72891156
ES.723.13	chr1	+	1020	3	FSM	ENSMUSG00000039323.19	ENSMUST00000155703.2	906	3	201	-315	201	-4	multi-exon	FALSE	canonical	3	3391	junction_1	173	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	NA	False	NA	7	True	ATTAAA	-7	NA	72888058	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72888472_72888722_72888864_72891156
ES.723.14	chr1	+	3040	2	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	333	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	NA	False	NA	18	True	AATAAA	-3	NA	72888190	72891633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72889434_72889836
ES.723.2	chr1	+	1910	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-592	-11	-592	11	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGAGTCTTTGGGGTGTC	698	False	NA	29	True	AATAAA	-14	NA	72863069	72891644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ES.723.3	chr1	+	958	4	NNC	ENSMUSG00000039323.19	novel	906	3	NA	NA	-516	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1685.54349955404	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	774	False	NA	7	True	ATTAAA	-7	NA	72863145	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72863270_72888244_72888472_72888722_72888864_72891156
ES.723.4	chr1	+	1231	4	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	1673.19514701663	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	1268	False	NA	7	True	ATTAAA	-7	NA	72863639	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72864124_72888244_72888385_72888722_72888864_72891156
ES.723.5	chr1	+	1252	5	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1534.25307560389	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATAAAAAGTGTGTGT	1277	False	NA	6	True	ATTAAA	-6	NA	72863648	72891621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72863798_72863853_72864124_72888244_72888472_72888722_72888864_72891156
ES.723.8	chr1	+	1118	4	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1700.94725243188	1053	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAAAGTGTGTGTC	1279	False	NA	7	True	ATTAAA	-7	NA	72863650	72891622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72864124_72888244_72888360_72888799_72888864_72891156
ES.723.9	chr1	+	3144	4	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1616.01382007292	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	1343	False	NA	18	True	AATAAA	-3	NA	72863714	72891633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_72864124_72888244_72888472_72888722_72889434_72889836
ES.7230.1	chr12	+	179	1	Intergenic	novelGene_5858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGCCACTGAAGC	NA	False	NA	3	True	NA	NA	NA	12851043	12851222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_12851000_12851200
ES.7231.1	chr12	+	3406	2	Intergenic	novelGene_5859	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTCATTCCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	12890964	12909055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_12891422_12906106
ES.7232.1	chr12	-	4443	1	Intergenic	novelGene_5860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATTTACTTAATTAAG	806	False	NA	NA	False	NA	NA	NA	12942300	12937857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_12937900_12942300
ES.7233.1	chr12	+	385	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	-35	-35	-35	35	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	12961987	12962372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_12962000_12962400
ES.7234.1	chr12	+	2466	1	Antisense	novelGene_ENSMUSG00000037169.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGGTTTTGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	12988998	12991464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_12989000_12991500
ES.7234.2	chr12	+	2400	2	Antisense	novelGene_ENSMUSG00000037169.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	3	39	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGGTTTTGTTTCGG	NA	False	NA	NA	False	NA	NA	NA	12988998	12991464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_12989914_12989979
ES.7235.1	chr12	-	2876	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	76	-278	-13	278	multi-exon	FALSE	canonical	3	794	junction_2	66.5	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGTGACTCACCCCTG	NA	False	NA	NA	False	NA	NA	NA	12991839	12985815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_12987612_12989610_12990488_12991636
ES.7235.10	chr12	-	2585	3	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	463.5	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCGATGTTTTCCTTC	NA	False	NA	-22	True	AATAAA	-16	NA	12991839	12986097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12990488_12991645
ES.7235.11	chr12	-	5739	1	NIC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-11	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	808	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGCGATGTTTTCCTT	NA	False	NA	-23	True	AATAAA	-15	NA	12991837	12986098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_12986100_12991800
ES.7235.12	chr12	-	2015	3	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	463.5	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGCGATGTTTTCCT	NA	False	NA	-24	True	AATAAA	-14	NA	12991839	12986099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12990039_12991764
ES.7235.13	chr12	-	2458	4	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	74	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	409.261394329943	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGCGATGTTTTCCT	NA	False	NA	-24	True	AATAAA	-14	NA	12991752	12986099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12990217_12990263_12990488_12991636
ES.7235.15	chr12	-	2425	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	78	171	-11	-168	multi-exon	FALSE	canonical	3	794	junction_2	66.5	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTCTTCCTTGTTT	NA	False	NA	NA	False	AAGAAA	-33	NA	12991837	12986264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_12987612_12989610_12990488_12991636
ES.7235.16	chr12	-	1848	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	80	746	-9	-743	multi-exon	FALSE	canonical	3	794	junction_2	66.5	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTGACTTATGGG	NA	False	NA	NA	False	NA	NA	NA	12991835	12986839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_12987612_12989610_12990488_12991636
ES.7235.2	chr12	-	2748	4	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-13	3	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_2	431.571031877205	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTCCTTCCTAGCTT	NA	False	NA	-15	True	AATAAA	-23	NA	12991839	12986090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12990488_12991288_12991436_12991636
ES.7235.3	chr12	-	2741	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	-64	-3	-64	3	multi-exon	FALSE	canonical	3	794	junction_2	66.5	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTCCTTCCTAGCTT	NA	False	NA	-15	True	AATAAA	-23	NA	12991979	12986090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_12987612_12989610_12990488_12991636
ES.7235.4	chr12	-	4601	2	NIC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-16	1	intron_retention	FALSE	canonical	3	794	junction_1	0	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATGTTTTCCTTCCTAGC	NA	False	NA	-17	True	AATAAA	-21	NA	12991842	12986092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_12990488_12991636
ES.7235.5	chr12	-	2655	4	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-49	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	39	junction_2	391.046743440673	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGATGTTTTCCTTCCT	NA	False	NA	-20	True	AATAAA	-18	NA	12991964	12986095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12989914_12989979_12990488_12991636
ES.7235.6	chr12	-	2274	3	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	463.5	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGATGTTTTCCTTCCT	NA	False	NA	-20	True	AATAAA	-18	NA	12991837	12986095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12990254_12991722
ES.7235.7	chr12	-	2676	5	NNC	ENSMUSG00000037169.16	novel	2674	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	11	junction_3	392.614553347173	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCGATGTTTTCCTTCC	NA	False	NA	-21	True	AATAAA	-17	NA	12991839	12986096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_12987612_12989610_12989914_12989979_12990488_12991288_12991436_12991636
ES.7235.9	chr12	-	3745	2	FSM	ENSMUSG00000037169.16	ENSMUST00000130990.2	2522	2	-1224	1	-15	-1	multi-exon	FALSE	canonical	3	927	junction_1	0	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGCGATGTTTTCCTTC	NA	False	NA	-22	True	AATAAA	-16	NA	12991841	12986097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_12987612_12989610
ES.7236.1	chr12	-	173	1	Intergenic	novelGene_5861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGACCC	NA	False	NA	NA	False	NA	NA	NA	13002316	13002143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_13002100_13002300
ES.7237.1	chr12	-	182	1	Intergenic	novelGene_5862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	13026521	13026339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_13026300_13026500
ES.7238.1	chr12	-	4980	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	43	-181	-7	181	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCTTTTTTTCTTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	13299171	13266792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.10	chr12	-	2477	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	12	-2326	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_11	435.433878332865	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299202	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281472_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.11	chr12	-	2471	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-16	-2326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	687.388863453577	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299180	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275488_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286123_13287207_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299106
ES.7238.12	chr12	-	3735	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-6	-2326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	440.561361900927	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299170	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13291037_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.13	chr12	-	3408	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-15	-2326	intron_retention	FALSE	canonical	2	5	junction_22	448.07081535909	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299179	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13296026_13296079_13299104
ES.7238.14	chr12	-	2497	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	14	-2326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	581.250467182608	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299200	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287322_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290646_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.15	chr12	-	3940	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-14	-2326	intron_retention	FALSE	canonical	3	1685	junction_13	180.505402628486	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299178	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.16	chr12	-	3934	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-10	-2326	intron_retention	FALSE	canonical	3	1685	junction_13	177.321725484844	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299174	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.2	chr12	-	1858	12	ISM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	17669	1874	-2165	-1874	3prime_fragment	FALSE	canonical	3	1723	junction_11	145.246498940751	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCGAGACATAATTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	13281545	13268847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445
ES.7238.22	chr12	-	4363	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-5	-2327	intron_retention	FALSE	canonical	3	1685	junction_14	176.327977234345	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGCTTGTGTCTTCTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	13299169	13269300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.24	chr12	-	3245	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-20	-2329	intron_retention	FALSE	canonical	3	1685	junction_14	170.80270846035	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGGCTTGTGTCTTCTT	NA	False	NA	-6	True	AATAAA	-19	NA	13299184	13269302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13295751_13296026_13296079_13299104
ES.7238.27	chr12	-	2544	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-9	-2331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	586.12087490551	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAAGGCTTGTGTCTTC	NA	False	NA	-8	True	AATAAA	-17	NA	13299173	13269304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281596_13281770_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.3	chr12	-	4888	22	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-17	-2324	intron_retention	FALSE	canonical	3	1685	junction_14	175.128692557548	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	-1	True	AATAAA	-24	NA	13299181	13269297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13296079_13299104
ES.7238.31	chr12	-	4404	19	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	6829	-2334	intron_retention	FALSE	non_canonical	0	0	junction_3	501.930003481623	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13292335	13269307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270856_13272874_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851
ES.7238.32	chr12	-	5385	23	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	20	-2335	intron_retention	TRUE	non_canonical	0	0	junction_3	460.635379100801	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299144	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270842_13272862_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13295751_13296026_13296079_13299104
ES.7238.34	chr12	-	2419	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	24	-2335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	440.665086431862	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299140	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289120_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.35	chr12	-	2488	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	52	-2335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	440.653449322708	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299112	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299021
ES.7238.36	chr12	-	4798	23	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-12	-2335	intron_retention	FALSE	canonical	3	1685	junction_15	175.535167534378	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299176	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13296079_13299104
ES.7238.37	chr12	-	2502	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-12	-2335	intron_retention	FALSE	canonical	3	94	junction_3	438.044516127803	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299176	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273793_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.38	chr12	-	2621	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-14	-2335	intron_retention	FALSE	canonical	3	1685	junction_13	177.317567795104	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299178	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.39	chr12	-	1527	17	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	14	-2335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	525.409301015646	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299150	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13290555_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.4	chr12	-	2528	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	-10	2324	-10	-2324	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	-1	True	AATAAA	-24	NA	13299224	13269297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.42	chr12	-	2447	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-20	-2335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	587.392883852026	1167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCATGAAGGCTTGTGT	NA	False	NA	-12	True	AATAAA	-13	NA	13299184	13269308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284046_13284102_13286018_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.44	chr12	-	2875	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-18	-2336	intron_retention	FALSE	canonical	3	1723	junction_11	159.182672624532	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATGAAGGCTTGTG	NA	False	NA	-13	True	AATAAA	-12	NA	13299182	13269309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.45	chr12	-	4600	23	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-17	-2336	intron_retention	FALSE	canonical	3	1685	junction_14	172.86427580978	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATGAAGGCTTGTG	NA	False	NA	-13	True	AATAAA	-12	NA	13299181	13269309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13295751_13296026_13296079_13299104
ES.7238.47	chr12	-	2501	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	29	-2336	intron_retention	FALSE	canonical	3	1685	junction_14	174.114500760276	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCATGAAGGCTTGTG	NA	False	NA	-13	True	AATAAA	-12	NA	13299135	13269309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.48	chr12	-	2396	25	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	20	-2337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	578.266392619641	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCATGAAGGCTTGT	NA	False	NA	-14	True	AATAAA	-11	NA	13299144	13269310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290555_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.49	chr12	-	4517	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-9	-2337	intron_retention	FALSE	canonical	3	1685	junction_15	173.126569519886	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCATGAAGGCTTGT	NA	False	NA	-14	True	AATAAA	-11	NA	13299173	13269310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13295751_13296026_13296079_13299104
ES.7238.5	chr12	-	3925	24	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-20	-2326	intron_retention	FALSE	canonical	3	1685	junction_14	175.8833283162	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299184	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.50	chr12	-	2273	27	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-7	-2337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	432.130383841559	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCATGAAGGCTTGT	NA	False	NA	-14	True	AATAAA	-11	NA	13299171	13269310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269373_13269561_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.52	chr12	-	3396	25	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	2	-2341	intron_retention	FALSE	non_canonical	0	0	junction_3	446.072202364396	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATATTTTCATGAAGGC	NA	False	NA	-18	True	AATAAA	-7	NA	13299212	13269314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270856_13272874_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.53	chr12	-	1956	1	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-20	-9496	mono-exon	FALSE	NA	NA	NA	NA	NA	1046	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAGAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	13299184	13297228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13297200_13299200
ES.7238.8	chr12	-	2495	26	NNC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-8	-2326	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	438.463236315201	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299172	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281566_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7238.9	chr12	-	3847	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	-16	-2326	intron_retention	FALSE	canonical	3	1685	junction_15	175.595766645694	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTGTGTCTTCTTTTA	NA	False	NA	-3	True	AATAAA	-22	NA	13299180	13269299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ES.7239.1	chr12	+	7254	52	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-18	-1	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_19	10.6193442780164	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTTGAGTACTTCCT	NA	False	NA	NA	False	AATAAA	-27	NA	13319115	13633811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.11	chr12	+	5231	36	NIC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	13.668674151549	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGGATGCCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	13319124	13633804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.12	chr12	+	3522	6	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-9	-50686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.3753048750261	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCTTTTTTTCTGTGTG	NA	False	NA	NA	False	ATTAAA	-13	NA	13319124	13328979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13325816
ES.7239.14	chr12	+	1490	14	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-8	261847	-8	-7700	5prime_fragment	FALSE	canonical	3	29	junction_4	5.96339921332748	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATCCACGAGTTAAAAG	NA	False	NA	NA	False	AATAAA	-25	NA	13319125	13371965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645
ES.7239.15	chr12	+	6011	41	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-8	-62996	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_40	9.68813707582629	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCTTTTTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	13319125	13506150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13504917
ES.7239.17	chr12	+	7439	50	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	0	22081	0	0	5prime_fragment	FALSE	canonical	3	21	junction_37	9.80412071565219	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGGGCTGAGAAAGTG	NA	False	NA	NA	False	AATAAA	-21	NA	13319133	13611731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837
ES.7239.18	chr12	+	9389	41	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	5	-59605	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_40	9.68813707582629	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATAAATCATT	NA	False	NA	NA	False	NA	NA	NA	13319138	13509541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13504917
ES.7239.19	chr12	+	12296	50	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	5	3	intron_retention	FALSE	canonical	0	0	junction_21	12.1646691423814	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	AATAAA	-23	NA	13319138	13633807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13616259_13633391
ES.7239.20	chr12	+	4409	36	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	6	-89525	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	9.03571146245015	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	13319139	13479621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13479397
ES.7239.22	chr12	+	6186	36	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	6	88855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	9.03571146245015	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATGTTGGCATGTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	13319139	13468520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13466519
ES.7239.23	chr12	+	7253	52	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	6	3259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_51	12.376572479016	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGCAGAGTCTCT	NA	False	NA	NA	False	AAAACA	-29	NA	13319139	13637071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610831_13610977_13616129_13616259_13636631
ES.7239.25	chr12	+	5834	44	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	8	99622	8	-34956	5prime_fragment	FALSE	canonical	3	21	junction_37	8.65928600870985	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGACTCTCTTTTTTGCT	NA	False	NA	NA	False	ATTAAA	-44	NA	13319141	13534190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710
ES.7239.27	chr12	+	4896	32	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	5042	88852	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	9.34560166878028	88	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACAATGTTGGCATGT	NA	False	NA	NA	False	ATTAAA	-13	NA	13324175	13468517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13467510
ES.7239.30	chr12	+	12050	37	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-9578	3	intron_retention	FALSE	canonical	3	26	junction_5	10.8861603724326	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	6470	False	NA	NA	False	AATAAA	-23	NA	13368767	13633807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13610977_13616129_13616259_13633391
ES.7239.31	chr12	+	6065	39	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	52510	9	-6702	-1	3prime_fragment	FALSE	canonical	3	21	junction_24	11.5787380363853	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCGGATGCCCTTTGAG	9346	False	NA	NA	False	AATAAA	-19	NA	13371643	13633803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.32	chr12	+	5342	35	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	2270	3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_32	13.2126931212214	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	AATAAA	-23	NA	13380615	13633807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610834_13610977_13616129_13616259_13633391
ES.7239.35	chr12	+	6073	20	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	24478	-60532	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	12.274334188802	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTTCAGTGGCACTC	NA	False	NA	NA	False	NA	NA	NA	13402823	13508614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13504917
ES.7239.36	chr12	+	5421	30	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	30298	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.1727913365267	94	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	AATAAA	-23	NA	13408643	13633807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13409428_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.38	chr12	+	4144	26	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	108300	5	49088	3	3prime_fragment	FALSE	canonical	3	21	junction_11	11.392348309282	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGCCCTTTGAGTACT	NA	False	NA	NA	False	AATAAA	-23	NA	13427433	13633807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.39	chr12	+	6747	27	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	49088	53555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	16.5313043547277	96	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTAGTCCAATGTTCAAG	NA	False	NA	NA	False	AATAAA	-13	NA	13427433	13687367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13683155_13683272_13684464
ES.7239.40	chr12	+	3057	13	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	62653	-62600	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	14.1389434620209	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGAGCAGTTGCAGCCA	2192	False	NA	NA	False	AATAAA	-25	NA	13440998	13506546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13504917
ES.7239.41	chr12	+	3293	18	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-61661	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.9291215279867	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	13475461	13633805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13475716_13482897_13483063_13491467_13491582_13491859_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.42	chr12	+	3606	2	Intergenic	novelGene_5863	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	8765	False	NA	NA	False	NA	NA	NA	13574926	13578606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_13575642_13575715
ES.7239.43	chr12	+	2960	1	Intergenic	novelGene_5865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCAAGAGTACTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	13684416	13687376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_13684400_13687400
ES.7239.5	chr12	+	7150	51	NIC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_46	12.4166984339638	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	13319120	13633805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.6	chr12	+	7230	52	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	13.7688949549857	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	13319121	13633805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386279_13386412_13402783_13402860_13406820_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.7	chr12	+	2882	10	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-10	281608	-10	-27461	5prime_fragment	FALSE	canonical	3	29	junction_4	5.8878405775519	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGATTCCCAAGGAAGT	NA	False	NA	NA	False	AATAAA	-44	NA	13319123	13352204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093
ES.7239.8	chr12	+	7308	53	NNC	ENSMUSG00000020576.11	novel	7234	52	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_44	13.6441867240575	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGGATGCCCTTTGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	13319123	13633804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13545818_13545891_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ES.7239.9	chr12	+	2624	22	ISM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	-9	230768	-9	23379	5prime_fragment	FALSE	canonical	3	26	junction_19	6.04330554829999	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACCAGTTGTTAAAAG	NA	False	NA	NA	False	ATTAAA	-12	NA	13319124	13403044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783
ES.724.1	chr1	-	4285	2	Antisense	novelGene_ENSMUSG00000039323.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTCTCTGGGCCAGGG	NA	False	NA	NA	False	TTTAAA	-9	NA	72882275	72877562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_72880794_72881221
ES.7240.1	chr12	-	1141	1	FSM	ENSMUSG00000071414.6	ENSMUST00000166583.4	948	1	171	-364	171	364	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	13505800	13504659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_13504700_13505800
ES.7241.1	chr12	-	5206	3	Antisense	novelGene_ENSMUSG00000020576.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACATTTGCCGGTCCCGG	NA	False	NA	NA	False	NA	NA	NA	13511929	13506010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_13506105_13506772_13511115_13511159
ES.7242.1	chr12	-	2257	1	Antisense	novelGene_ENSMUSG00000020576.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13611436	13609179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_13609200_13611400
ES.7243.1	chr12	-	157	1	Intergenic	novelGene_5864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	13652220	13652063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_13652100_13652200
ES.7244.1	chr12	+	2769	3	Intergenic	novelGene_5866	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAGTCATGGTATTCTA	NA	False	NA	NA	False	NA	NA	NA	13855869	13899218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_13856099_13858243_13858349_13896783
ES.7245.1	chr12	+	3712	1	Intergenic	novelGene_5867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGATGCAGGAGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	13942328	13946040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_13942300_13946000
ES.7246.1	chr12	-	3444	2	FSM	ENSMUSG00000020607.8	ENSMUST00000020926.8	4164	2	-45	765	-45	-765	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAACAGGACTCCTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	14202100	14197595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_14200762_14201822
ES.7246.2	chr12	-	3166	2	FSM	ENSMUSG00000020607.8	ENSMUST00000020926.8	4164	2	-28	1026	-28	-1026	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAATCGAGTGATTTA	NA	False	NA	NA	False	ACTAAA	-11	NA	14202083	14197856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_14200762_14201822
ES.7247.1	chr12	+	4172	2	NNC	ENSMUSG00000113285.2	novel	1381	11	NA	NA	47832	2599	intron_retention	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGCTATATATTGTC	NA	False	NA	NA	False	NA	NA	NA	15165949	15190118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_15166038_15186034
ES.7248.1	chr12	+	172	1	Intergenic	novelGene_5868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCCA	NA	False	NA	NA	False	NA	NA	NA	15579056	15579228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_15579100_15579200
ES.7249.1	chr12	-	176	1	Intergenic	novelGene_5869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATCTGAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	15746616	15746440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_15746400_15746600
ES.725.1	chr1	-	1646	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATACTGATATACTTT	NA	False	NA	NA	False	NA	NA	NA	72885072	72883426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72883400_72885100
ES.725.2	chr1	-	164	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	72885075	72884911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72884900_72885100
ES.7250.1	chr12	-	4123	4	NIC	ENSMUSG00000020601.9	novel	4198	3	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGGCCTCAAAAATGA	NA	False	NA	NA	False	AATAAA	-22	NA	15866893	15841725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_15844078_15859696_15859990_15865231_15866600_15866783
ES.7251.1	chr12	+	175	1	Intergenic	novelGene_5870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	16163745	16163920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_16163700_16163900
ES.7252.1	chr12	+	224	1	Intergenic	novelGene_5871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTCAGAATCATAGATGT	NA	False	NA	NA	False	AAAAAG	-13	NA	16517860	16518084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_16517900_16518100
ES.7253.1	chr12	+	2081	1	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACAAAAACAAAAACCAGAT	NA	False	NA	NA	False	NA	NA	NA	16598418	16600499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_16598400_16600500
ES.7254.1	chr12	+	5025	1	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTAAGTGCCAGGGACA	6623	False	NA	NA	False	NA	NA	NA	16628994	16634019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_16629000_16634000
ES.7254.2	chr12	+	4300	2	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTAAGTGCCAGGGACA	6623	False	NA	NA	False	NA	NA	NA	16628994	16634019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_16629973_16630697
ES.7255.1	chr12	-	5653	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	8	-1547	1	176	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACTCTTCACTATGGG	7247	False	NA	NA	False	CATAAA	-16	NA	16639766	16585493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.11	chr12	-	4875	18	NIC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	39.4544106410315	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7279	False	NA	-22	True	AATAAA	-27	NA	16639734	16585954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.12	chr12	-	4072	14	NNC	ENSMUSG00000020593.17	novel	5433	21	NA	NA	-3048	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.7508512803788	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	NA	False	NA	-22	True	AATAAA	-27	NA	16615493	16585954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611047_16612363_16612458_16613622_16613814_16614526_16614621_16615391
ES.7255.15	chr12	-	5146	20	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	45.098783542445	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGGCATATGAACTT	7247	False	NA	-26	True	AATAAA	-23	NA	16639766	16585958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.16	chr12	-	7667	19	NNC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	1	-4	intron_retention	FALSE	canonical	0	0	junction_10	39.4686936416418	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGGCATATGAACTT	7247	False	NA	-26	True	AATAAA	-23	NA	16639766	16585958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612596_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.17	chr12	-	5032	19	NNC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	45.1931724877351	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGGCATATGAACTT	7239	False	NA	-26	True	AATAAA	-23	NA	16639774	16585958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621286_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.18	chr12	-	5355	20	NIC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	2	7	junction_19	37.1971613011566	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCAGGCATATGAAC	7298	False	NA	-28	True	AATAAA	-21	NA	16639715	16585960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639498
ES.7255.19	chr12	-	5463	21	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	-3	-6	combination_of_known_junctions	FALSE	canonical	2	7	junction_20	35.0814765937809	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCAGGCATATGAAC	7289	False	NA	-28	True	AATAAA	-21	NA	16639724	16585960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639498
ES.7255.2	chr12	-	5460	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	-115	236	-112	49	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTCTGGTTTCTTAT	7127	False	NA	27	True	TTTAAA	-30	NA	16639886	16585905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.21	chr12	-	5403	22	NNC	ENSMUSG00000020593.17	novel	5430	22	NA	NA	-11219	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	44.2933941113657	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCTGAAAATCAGGCATA	NA	False	NA	-33	True	AATAAA	-16	NA	16672186	16585965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16662553_16662611_16672072
ES.7255.22	chr12	-	5263	21	NNC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	45.3165256832428	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCTGAAAATCAGGCAT	7248	False	NA	-34	True	AATAAA	-15	NA	16639765	16585966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604025_16608409_16608493_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.23	chr12	-	4315	15	NNC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	-3	-75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	49.0760031138708	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCACTGTGTTGTGCTT	7289	False	NA	-97	True	ATTAAA	-17	NA	16639724	16586029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613799_16629882_16629979_16630704_16630906_16639498
ES.7255.24	chr12	-	5357	22	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	-78	combination_of_known_junctions	FALSE	canonical	3	30	junction_21	35.2563659197666	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCACTGTGTTGTG	7247	False	NA	-100	True	ATTAAA	-14	NA	16639766	16586032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.25	chr12	-	5195	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	6	380	2	-95	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATCAATATAA	7248	False	NA	-117	True	NA	NA	NA	16639765	16586049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.26	chr12	-	5525	22	NIC	ENSMUSG00000020593.17	novel	5511	22	NA	NA	-10	-95	combination_of_known_splicesites	FALSE	canonical	2	3	junction_21	38.9430655993676	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATCAATATAA	7282	False	NA	-117	True	NA	NA	NA	16639731	16586049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639498
ES.7255.27	chr12	-	5114	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	-9	-991	-9	-95	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATCAATATAA	7230	False	NA	-117	True	NA	NA	NA	16639783	16586049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.28	chr12	-	4173	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	8	-67	1	67	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTAGTCACTGGGCTCT	7247	False	NA	NA	False	AAGAAA	-16	NA	16639766	16586973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.29	chr12	-	4159	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	1	-57	1	57	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATCTTTCTATTTAAA	7247	False	NA	32	True	NA	NA	NA	16639766	16587131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.31	chr12	-	4090	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	-24	1515	-21	4	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTTTACTTTGAAAG	7218	False	NA	-21	True	AATGAA	-17	NA	16639795	16587184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.32	chr12	-	3962	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	8	144	1	4	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGCTTTACTTTGAAAG	7247	False	NA	-21	True	AATGAA	-17	NA	16639766	16587184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.33	chr12	-	4827	20	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	67	junction_15	22.2459184217373	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGCTTTACTTTG	7248	False	NA	-25	True	AATGAA	-13	NA	16639765	16587188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.34	chr12	-	4015	21	NNC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.3214468324157	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGAGTTGCTTTACTTT	7248	False	NA	-26	True	AATGAA	-12	NA	16639765	16587189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590954_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.35	chr12	-	3964	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	-51	190	-44	-190	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCATTCTGTGGATGT	7195	False	NA	NA	False	ATTAAA	-26	NA	16639818	16587378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.36	chr12	-	3484	18	NIC	ENSMUSG00000020593.17	novel	4103	21	NA	NA	0	-190	combination_of_known_splicesites	FALSE	canonical	3	6	junction_10	39.4544106410315	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCATTCTGTGGATGT	7246	False	NA	NA	False	ATTAAA	-26	NA	16639767	16587378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.37	chr12	-	3811	20	NIC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	125	-197	combination_of_known_junctions	FALSE	canonical	2	7	junction_19	37.1971613011566	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGAGCCTCATTCTG	7417	False	NA	NA	False	ATTAAA	-19	NA	16639596	16587385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639498
ES.7255.38	chr12	-	4038	21	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	-3	-197	combination_of_known_junctions	FALSE	canonical	2	7	junction_20	35.0814765937809	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGAGCCTCATTCTG	7289	False	NA	NA	False	ATTAAA	-19	NA	16639724	16587385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639498
ES.7255.39	chr12	-	3889	21	NNC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	-197	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	33.8086897113745	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGAGCCTCATTCTG	7240	False	NA	NA	False	ATTAAA	-19	NA	16639773	16587385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621286_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.4	chr12	-	5489	22	NIC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	-9	37	combination_of_known_junctions	FALSE	canonical	3	30	junction_21	35.2563659197666	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTGCTCTTATTTTTTT	7230	False	NA	15	True	TTTAAA	-18	NA	16639783	16585917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.40	chr12	-	3778	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	-9	345	-9	-197	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGAGCCTCATTCTG	7230	False	NA	NA	False	ATTAAA	-19	NA	16639783	16587385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.41	chr12	-	3895	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	-31	1717	-28	-198	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAAAGAGCCTCATTCT	7211	False	NA	NA	False	ATTAAA	-18	NA	16639802	16587386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.42	chr12	-	4187	22	NIC	ENSMUSG00000020593.17	novel	4103	21	NA	NA	-9	-198	combination_of_known_splicesites	FALSE	canonical	2	3	junction_21	38.9430655993676	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAAAGAGCCTCATTCT	7283	False	NA	NA	False	ATTAAA	-18	NA	16639730	16587386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639498
ES.7255.43	chr12	-	6792	22	NNC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	-198	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	44.2463726942519	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAAAGAGCCTCATTCT	7243	False	NA	NA	False	ATTAAA	-18	NA	16639770	16587386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16624056_16624142_16626641_16626786_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.44	chr12	-	4003	22	NIC	ENSMUSG00000020593.17	novel	4103	21	NA	NA	1	-198	combination_of_known_junctions	FALSE	canonical	3	30	junction_21	35.2563659197666	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAAAGAGCCTCATTCT	7247	False	NA	NA	False	ATTAAA	-18	NA	16639766	16587386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.45	chr12	-	3685	21	NNC	ENSMUSG00000020593.17	novel	5581	21	NA	NA	1	-198	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	37.5138641038217	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAAAGAGCCTCATTCT	7247	False	NA	NA	False	ATTAAA	-18	NA	16639766	16587386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627056_16627130_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.46	chr12	-	5677	19	NIC	ENSMUSG00000020593.17	novel	4114	20	NA	NA	2	-204	intron_retention	FALSE	canonical	3	46	junction_14	25.0516133878306	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACAGTCCAAAGAGCCT	7248	False	NA	NA	False	ATTAAA	-12	NA	16639765	16587392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.47	chr12	-	4606	1	FSM	ENSMUSG00000020593.17	ENSMUST00000223129.2	3022	1	-1569	-15	-1163	15	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGCATTTTGACTGT	NA	False	NA	NA	False	NA	NA	NA	16613608	16609002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16609000_16613600
ES.7255.5	chr12	-	5401	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	-28	-1270	-21	36	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGCTCTTATTTTTT	7218	False	NA	14	True	TTTAAA	-17	NA	16639795	16585918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ES.7255.6	chr12	-	5238	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	-4	-1120	-4	34	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGGTGCTCTTATTTT	7235	False	NA	12	True	TTTAAA	-15	NA	16639778	16585920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ES.7255.8	chr12	-	5429	22	NNC	ENSMUSG00000020593.17	novel	5511	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	40.8824985147344	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7247	False	NA	-22	True	AATAAA	-27	NA	16639766	16585954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630900_16634508_16634653_16639718
ES.7256.1	chr12	+	3749	4	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTTTTAGGTATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	16685107	16689451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_16686897_16687108_16687598_16687651_16688451_16688779
ES.7257.1	chr12	-	7841	33	NNC	ENSMUSG00000036523.17	novel	8058	35	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.73415177660275	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTGGGTACGGATTA	54	False	NA	3	True	AATAAA	-22	NA	16850683	16720611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16722547_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16740759_16740919_16742685_16742789_16746209_16746836_16748542_16748648_16749496_16749694_16751161_16751278_16752325_16752666_16754430_16754568_16756096_16756293_16757803_16757985_16758553_16758752_16759432_16759562_16760272_16760402_16761673_16762025_16764777_16764964_16766628_16766773_16767176_16767291_16770847_16770977_16773291_16773436_16774758_16774942_16783278_16783456_16785146_16785267_16789889_16790256_16807141_16807241_16850647
ES.7257.2	chr12	-	8218	34	NIC	ENSMUSG00000036523.17	novel	8058	35	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	2.64036617100509	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGGTGGGTACGG	NA	False	NA	-1	True	AATAAA	-18	NA	16850927	16720615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16740759_16740919_16742685_16742789_16746209_16746836_16748542_16748648_16749496_16749694_16751161_16751278_16752325_16752666_16754430_16754568_16756096_16756293_16757803_16757985_16758553_16758752_16759432_16759562_16760272_16760402_16761673_16762025_16764777_16764964_16766628_16766773_16767176_16767291_16770847_16770977_16773291_16773436_16774758_16774942_16783278_16783456_16785146_16785267_16789889_16790256_16807141_16807241_16850647
ES.7257.3	chr12	-	4648	16	NNC	ENSMUSG00000036523.17	novel	7940	33	NA	NA	5615	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	3.04338992280355	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTGTGGTGGGTAC	905	False	NA	-3	True	AATAAA	-16	NA	16752409	16720617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734476_16738497_16738641_16740759_16740919_16742685_16742789_16746209_16746836_16748542_16748648_16749496_16749694_16751161_16751278_16752325
ES.7257.4	chr12	-	3745	12	NNC	ENSMUSG00000036523.17	novel	7940	33	NA	NA	-5559	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.35748823865807	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTGTTTGTGTGGTGG	6952	False	NA	-7	True	AATAAA	-12	NA	16746362	16720621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730447_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16740759_16740919_16742685_16742789_16746209
ES.7257.6	chr12	-	4232	13	NIC	ENSMUSG00000036523.17	novel	7940	33	NA	NA	8432	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	3.26173096513015	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCTTGTTTGTGTGGTG	3722	False	NA	-8	True	AATAAA	-11	NA	16749592	16720622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16742685_16742789_16746209_16746836_16748542_16748648_16749496
ES.7257.7	chr12	-	7285	35	NIC	ENSMUSG00000036523.17	novel	8058	35	NA	NA	-14	478	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	2.60688468307769	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGAGATCCAGGGGACA	NA	False	NA	NA	False	NA	NA	NA	16850901	16721601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16722545_16723746_16723886_16724610_16724812_16727688_16727825_16730200_16730420_16731330_16731506_16732128_16732334_16734362_16734525_16738497_16738641_16740759_16740919_16742685_16742789_16746209_16746836_16748542_16748648_16749496_16749694_16751161_16751278_16752325_16752666_16754430_16754568_16756096_16756290_16757803_16757985_16758553_16758752_16759432_16759562_16760272_16760402_16761673_16762025_16764777_16764964_16766628_16766773_16767176_16767291_16770847_16770977_16773291_16773436_16774758_16774942_16783278_16783456_16785146_16785267_16789889_16790256_16807141_16807241_16809452_16809535_16850647
ES.7257.8	chr12	-	5164	2	Intergenic	novelGene_5872	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAGAAAAGAAACCATG	NA	False	NA	NA	False	NA	NA	NA	16802347	16797110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_16797828_16797900
ES.7257.9	chr12	-	3852	2	NIC	ENSMUSG00000036523.17	novel	8058	35	NA	NA	-34	-20384	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	16850921	16803662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_16807241_16850647
ES.7258.1	chr12	+	2625	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	-264	1	-128	-1	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGCGTGCCTGTGTTT	7268	False	NA	3	True	ATTAAA	-14	NA	16860835	16876752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.10	chr12	+	2834	10	NNC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	-7	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.670330704722	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7389	False	NA	-5	True	ATTAAA	-6	NA	16860956	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16862932_16863057_16863847_16863914_16865273_16865488_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.12	chr12	+	2789	10	NNC	ENSMUSG00000057469.9	novel	2694	10	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	124.670330704722	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7394	False	NA	-5	True	ATTAAA	-6	NA	16860961	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16862289_16862374_16863847_16863914_16865273_16865488_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.13	chr12	+	2539	9	NNC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	122.493303388389	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7395	False	NA	-5	True	ATTAAA	-6	NA	16860962	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16863847_16863914_16866118_16866170_16866400_16866456_16868841_16869059_16870229_16870386_16872095_16872209_16874570_16874719_16875365
ES.7258.14	chr12	+	2340	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	1	-9	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	88.3712182909245	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7397	False	NA	-5	True	ATTAAA	-6	NA	16860964	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
ES.7258.17	chr12	+	2433	7	NNC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.420765525403	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7402	False	NA	-5	True	ATTAAA	-6	NA	16860969	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16866400_16866472_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.19	chr12	+	5020	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	1	-2	intron_retention	FALSE	canonical	2	143	junction_1	51.562260100452	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	7403	False	NA	2	True	ATTAAA	-13	NA	16860970	16876751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.20	chr12	+	4787	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	1	0	intron_retention	FALSE	canonical	2	127	junction_1	58.8285644903902	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7403	False	NA	4	True	ATTAAA	-15	NA	16860970	16876753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16874719_16875365
ES.7258.22	chr12	+	2530	9	NNC	ENSMUSG00000057469.9	novel	2694	10	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.357048686276	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7408	False	NA	-5	True	ATTAAA	-6	NA	16860975	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16862320_16862374_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.3	chr12	+	2287	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-12	-9	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	95.7747357083276	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTGCTGCGTGC	7384	False	NA	-5	True	ATTAAA	-6	NA	16860951	16876744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
ES.7258.4	chr12	+	2441	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	-25	2	-11	-2	multi-exon	FALSE	canonical	2	127	junction_1	56.1505911713215	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTGCGTGCCTGTGTT	7385	False	NA	2	True	ATTAAA	-13	NA	16860952	16876751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7258.5	chr12	+	5453	5	NNC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_4	110.761850381799	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7385	False	NA	4	True	ATTAAA	-15	NA	16860952	16876753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870385_16872091
ES.7258.6	chr12	+	2173	4	FSM	ENSMUSG00000057469.9	ENSMUST00000220707.2	3018	4	-17	862	-11	-388	multi-exon	FALSE	canonical	3	127	junction_1	65.5303152916436	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTATTTTGAAGCTT	7385	False	NA	NA	False	CATAAA	-30	NA	16860952	16871766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229
ES.7258.9	chr12	+	7525	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	171	junction_3	37.621270579288	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGCGTGCCTGTGTTT	7386	False	NA	3	True	ATTAAA	-14	NA	16860953	16876752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ES.7259.1	chr12	+	5820	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-407	-2228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGATGTACCTCTGT	1628	False	NA	22	True	NA	NA	NA	16944488	17035596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.10	chr12	+	5726	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-61	-1976	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCAGCTTTGATATCT	1974	False	NA	NA	False	TTTAAA	-40	NA	16944834	17035848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.11	chr12	+	4705	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-60	-2996	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTGAAACAAGTTGAA	1975	False	NA	NA	False	NA	NA	NA	16944835	17034828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.12	chr12	+	7959	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-59	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	63.4239890539177	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTAAGCATCTTTTC	1976	False	NA	4	True	AATAAA	-11	NA	16944836	17037809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.13	chr12	+	5862	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-59	-1989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.4240770866912	321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTGGCAATATTTC	1976	False	NA	NA	False	TTTAAA	-27	NA	16944836	17035835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998216_16998363_16998462_16998604_17000572_17000712_17002496_17002589_17003261_17003342_17004091_17004181_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.14	chr12	+	6948	31	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-58	-2235	intron_retention	FALSE	non_canonical	0	0	junction_9	50.5711380136932	320	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATGTGTGTGATGTA	1977	False	NA	15	True	NA	NA	NA	16944837	17035589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018582_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.15	chr12	+	6571	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-58	-1296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.4320165364015	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCAAGTTTACACATG	1977	False	NA	NA	False	NA	NA	NA	16944837	17036528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.16	chr12	+	5739	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-56	-2232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	63.4239890539177	320	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTGTGTGATGTACCT	1979	False	NA	18	True	NA	NA	NA	16944839	17035592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.18	chr12	+	1639	9	ISM	ENSMUSG00000020580.11	ENSMUST00000220688.2	4357	33	-324	24649	-52	6635	5prime_fragment	FALSE	canonical	3	133	junction_2	21.1468082698075	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGCCTAGCTGTCAAG	1983	False	NA	NA	False	NA	NA	NA	16944843	17003454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261
ES.7259.2	chr12	+	4628	31	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-88	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.7405614230879	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTTCTTTGATTGATA	1947	False	NA	NA	False	ACTAAA	-15	NA	16944807	17028188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889
ES.7259.20	chr12	+	5024	1	Genic_Genomic	ENSMUSG00000020580.11	novel	NA	NA	NA	NA	-52	-46952	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAAAAATTGTTATAA	1983	False	NA	NA	False	NA	NA	NA	16944843	16949867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_16944800_16949900
ES.7259.21	chr12	+	6845	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-51	-1121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	63.4239890539177	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTCTCCATGGA	1984	False	NA	NA	False	AATAAA	-17	NA	16944844	17036703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.22	chr12	+	6358	31	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-51	-1233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	50.3022420529697	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGCTGTTCGTGTATAT	1984	False	NA	NA	False	AGTAAA	-21	NA	16944844	17036591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.23	chr12	+	5317	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-51	-2237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.7364833239896	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACTAATGTGTGTGATG	1984	False	NA	13	True	NA	NA	NA	16944844	17035587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16944852_16944989_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.24	chr12	+	8065	35	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-51	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	70.4190435571354	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTTTTCCTGTGAAATA	1984	False	NA	14	True	AATAAA	-21	NA	16944844	17037819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004091_17004181_17004907_17004969_17005670_17005801_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.25	chr12	+	4590	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-50	-3101	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATATTTTACTGAGACA	1985	False	NA	NA	False	ACTAAA	-2	NA	16944845	17034723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.28	chr12	+	7988	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-50	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	58.5656332903992	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAAGCATCTTTTCCTG	1985	False	NA	7	True	AATAAA	-14	NA	16944845	17037812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003734_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008253_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.29	chr12	+	5807	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-49	-1989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.5222443386035	321	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTGGCAATATTTC	1986	False	NA	NA	False	TTTAAA	-27	NA	16944846	17035835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.33	chr12	+	9156	31	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-34	-5	intron_retention	FALSE	non_canonical	0	0	junction_9	39.089711633057	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTTTTCCTGTGAAATA	2001	False	NA	14	True	AATAAA	-21	NA	16944861	17037819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.34	chr12	+	5581	27	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-33	-3313	intron_retention	FALSE	non_canonical	0	0	junction_11	60.7645202653401	293	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAGGAGAGAATCAGTT	2002	False	NA	NA	False	ATTAAA	-19	NA	16944862	17024790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981
ES.7259.37	chr12	+	7828	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-29	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	73.9894018668445	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAGAAA	2006	False	NA	-17	True	NA	NA	NA	16944866	17037788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003342_17004907_17004973_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018575_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.38	chr12	+	6646	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-27	-1296	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	63.4239890539177	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCAAGTTTACACATG	2008	False	NA	NA	False	NA	NA	NA	16944868	17036528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.4	chr12	+	6494	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-84	-1231	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTTCGTGTATATAT	1951	False	NA	NA	False	AGTAAA	-23	NA	16944811	17036593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.40	chr12	+	7462	30	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-19	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	51.2355080870848	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTAAGCATCTTTTC	2016	False	NA	4	True	AATAAA	-11	NA	16944876	17037809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.42	chr12	+	7873	34	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-15	-36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	63.1925795646086	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAGAAA	2020	False	NA	-17	True	NA	NA	NA	16944880	17037788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004091_17004181_17004907_17004973_17006622_17006792_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.43	chr12	+	2629	6	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-14	68549	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	63.8517031879338	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAACAAACAAACAAAC	2021	False	NA	NA	False	NA	NA	NA	16944881	17106373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16994492_17106312
ES.7259.44	chr12	+	6278	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-10	-1373	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGAGGTTCTATCCTAT	2025	False	NA	NA	False	TATAAA	-12	NA	16944885	17036451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.46	chr12	+	6544	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	11	-1236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.4711884338579	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGCTGTTCGTGTA	2046	False	NA	NA	False	AGTAAA	-18	NA	16944906	17036588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17003583_17003734_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.47	chr12	+	6643	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	24	-1124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.4711884338579	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAAATCTCTCCAT	2059	False	NA	NA	False	AATAAA	-14	NA	16944919	17036700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17003583_17003734_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.48	chr12	+	2538	5	ISM	ENSMUSG00000020580.11	ENSMUST00000220688.2	4357	33	-195	33551	77	-2267	5prime_fragment	FALSE	canonical	3	133	junction_2	15.6424902109607	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2112	False	NA	NA	False	NA	NA	NA	16944972	16994552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694
ES.7259.50	chr12	+	7623	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-94	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.4320165364015	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATCTTTTCCTGTGAA	2213	False	NA	11	True	AATAAA	-18	NA	16945073	17037816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.51	chr12	+	6938	31	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-72	-1989	intron_retention	FALSE	non_canonical	0	0	junction_9	39.089711633057	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTGGCAATATTTC	2235	False	NA	NA	False	TTTAAA	-27	NA	16945095	17035835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.52	chr12	+	7558	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-40	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	64.468863608722	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAAGCATCTTTTCCTG	2267	False	NA	7	True	AATAAA	-14	NA	16945127	17037812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007219_17007307_17007461_17007511_17008119_17008256_17008340_17008424_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.53	chr12	+	6045	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-40	-1236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	50.3572461245933	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGCTGTTCGTGTA	2267	False	NA	NA	False	AGTAAA	-18	NA	16945127	17036588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011762_17015124_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.54	chr12	+	7936	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-40	-1233	intron_retention	FALSE	non_canonical	0	0	junction_11	64.1277716262619	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGCTGTTCGTGTATAT	2267	False	NA	NA	False	AGTAAA	-21	NA	16945127	17036591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16984241_16984348_16985151_16985320_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.55	chr12	+	5509	33	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-40	-1989	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.0176011064785	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTGGCAATATTTC	2267	False	NA	NA	False	TTTAAA	-27	NA	16945127	17035835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004091_17004181_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.57	chr12	+	5791	29	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	13397	-1232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	40.0696300844173	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCTGTTCGTGTATATA	NA	False	NA	NA	False	AGTAAA	-22	NA	16990402	17036592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.6	chr12	+	6409	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-75	-1300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	50.5309581497289	328	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAATGTCAAGTTTACA	1960	False	NA	NA	False	NA	NA	NA	16944820	17036524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008347_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.61	chr12	+	5154	23	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-18335	-1113	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.8312056515117	312	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCATGGAGCGTCTTC	NA	False	NA	NA	False	AATAAA	-25	NA	17004746	17036711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011597_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.63	chr12	+	7683	17	NIC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-17487	-2231	intron_retention	FALSE	canonical	3	165	junction_10	15.439271153458	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTGTGATGTACCTC	NA	False	NA	19	True	NA	NA	NA	17005594	17035593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17007511_17008119_17008256_17008340_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021321_17022661_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.64	chr12	+	3396	17	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-13642	-1999	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.0146462923612	305	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAATCTGTGTGTG	NA	False	NA	NA	False	TTTAAA	-17	NA	17009439	17035825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17009510_17011597_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.65	chr12	+	176	1	Intergenic	novelGene_5875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	17009557	17009733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17009600_17009700
ES.7259.66	chr12	+	4929	14	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-7577	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.5985889667468	307	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAGAAA	NA	False	NA	-17	True	NA	NA	NA	17015504	17037788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027873_17028104_17034638
ES.7259.67	chr12	+	3648	13	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-6436	-1124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	56.8636282892872	303	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAAATCTCTCCAT	NA	False	NA	NA	False	AATAAA	-14	NA	17016645	17036700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022988_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.69	chr12	+	1562	8	ISM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	77919	2535	-267	-2535	3prime_fragment	FALSE	canonical	3	188	junction_3	11.26852216738	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAACTGTAA	NA	False	NA	NA	False	NA	NA	NA	17022814	17035289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.7	chr12	+	7722	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-68	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTGGAATGCTGCAGC	1967	False	NA	32	True	AATAAA	-39	NA	16944827	17037837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.70	chr12	+	3817	5	ISM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	80573	15	2387	-15	3prime_fragment	FALSE	canonical	3	194	junction_2	5.30919014539883	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTAAGCATCTTTTC	NA	False	NA	4	True	AATAAA	-11	NA	17025468	17037809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.71	chr12	+	3488	1	Genic_Genomic	ENSMUSG00000020580.11	novel	NA	NA	NA	NA	11268	13	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTGGAATGCTGCAGC	638	False	NA	32	True	AATAAA	-39	NA	17034349	17037837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_17034300_17037800
ES.7259.72	chr12	+	175	1	Intergenic	novelGene_5876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATGTGACT	6839	False	NA	NA	False	NA	NA	NA	17040550	17040725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17040600_17040700
ES.7259.8	chr12	+	6595	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-63	-1109	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGAGCGTCTTCACAT	1972	False	NA	NA	False	AATAAA	-29	NA	16944832	17036715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.7259.9	chr12	+	6971	32	NNC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	-61	-731	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	39.462386100607	331	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAACTTAAGTACC	1974	False	NA	NA	False	AATAAA	-13	NA	16944834	17037093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004973_17007221_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ES.726.1	chr1	-	181	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	72885268	72885087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_72885100_72885300
ES.7260.1	chr12	-	2491	1	Intergenic	novelGene_5873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACTAGTTGAGTCACTC	NA	False	NA	NA	False	NA	NA	NA	16957439	16954948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_16954900_16957400
ES.7260.2	chr12	-	176	1	Intergenic	novelGene_5874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	16955450	16955274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_16955300_16955400
ES.7261.1	chr12	-	3729	1	Antisense	novelGene_ENSMUSG00000020580.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTAACGCTAGGCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	17015562	17011833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_17011800_17015600
ES.7262.1	chr12	-	3001	7	NNC	ENSMUSG00000045679.15	novel	363	4	NA	NA	8	15750	intron_retention	FALSE	canonical	0	0	junction_1	68.0402250306554	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATAAGAAAATAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	17050060	17022898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17025279_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.10	chr12	-	1697	8	NNC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.9975704099057	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAATTCTTAAGCTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	17050027	17038655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17039443_17039574_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.11	chr12	-	1741	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	7	-42	7	-8	multi-exon	FALSE	canonical	3	14	junction_2	66.9943281181325	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAATTCTTAAGCTGT	NA	False	NA	-7	True	AATAAA	-18	NA	17050061	17038656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.12	chr12	-	2949	6	NIC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	9	-10	intron_retention	FALSE	canonical	3	145	junction_1	17.0058813355851	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCCCGAATTCTTAAGCT	NA	False	NA	-9	True	AATAAA	-16	NA	17050017	17038658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_17039897_17042278_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.13	chr12	-	1718	7	NNC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	715	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	78.7903335864665	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCCCCCGAATTCTTAAG	NA	False	NA	-11	True	AATAAA	-14	NA	17049311	17038660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045693_17047634_17047705_17047774_17047858_17049223
ES.7262.14	chr12	-	3862	6	NIC	ENSMUSG00000045679.15	novel	1706	6	NA	NA	5	0	intron_retention	FALSE	canonical	3	122	junction_2	27.4910894654977	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAGTTTTCTATATTTA	NA	False	NA	-49	True	AGTAAA	-18	NA	17050063	17038698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_17039897_17042278_17042321_17043453_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.2	chr12	-	2123	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	81	-276	-5	276	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	17050038	17038372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.3	chr12	-	1826	7	NNC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	105	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	66.4847518023661	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTAAGCTGTCATGAA	NA	False	NA	-1	True	AATAAA	-24	NA	17049921	17038650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17039897_17042278_17042321_17043453_17043575_17045516_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.4	chr12	-	1925	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	1	2	-1	-2	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTAAGCTGTCATGAA	NA	False	NA	-1	True	AATAAA	-24	NA	17050118	17038650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.5	chr12	-	1698	7	NNC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	724	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	66.2864155682662	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTTAAGCTGTCATGA	NA	False	NA	-2	True	AATAAA	-23	NA	17049302	17038651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049223
ES.7262.6	chr12	-	5901	4	NIC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	1	-5	intron_retention	FALSE	canonical	3	122	junction_2	22.9830855679176	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAATTCTTAAGCTGTCAT	NA	False	NA	-4	True	AATAAA	-21	NA	17050025	17038653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_17039897_17042278_17042321_17043453_17047858_17049813
ES.7262.7	chr12	-	1764	7	NNC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67.4034288610173	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAATTCTTAAGCTGTCA	NA	False	NA	-5	True	AATAAA	-20	NA	17050054	17038654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17039897_17042278_17042321_17043546_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ES.7262.8	chr12	-	6560	1	NIC	ENSMUSG00000045679.15	novel	3045	5	NA	NA	4812	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAATTCTTAAGCTGTCA	NA	False	NA	-5	True	AATAAA	-20	NA	17045214	17038654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_17038700_17045200
ES.7262.9	chr12	-	1691	5	NIC	ENSMUSG00000045679.15	novel	1928	7	NA	NA	9	-7	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	66.0037877700969	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAATTCTTAAGCTGTC	NA	False	NA	-6	True	AATAAA	-19	NA	17050017	17038655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_17039897_17042278_17042321_17043453_17043575_17047774_17047858_17049813
ES.7263.1	chr12	-	1843	5	NNC	ENSMUSG00000071398.9	novel	3437	5	NA	NA	2	630	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	1.11803398874989	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTGTCTCTGGTCATC	NA	False	NA	NA	False	NA	NA	NA	17061726	17054960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17056049_17057020_17057238_17058273_17058314_17061128_17061353_17061452
ES.7264.1	chr12	-	4070	3	Intergenic	novelGene_5877	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGATGCTTCAGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	17155172	17149508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17151044_17151638_17153330_17154328
ES.7265.1	chr12	+	3396	1	Intergenic	novelGene_5878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	17188715	17192111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17188700_17192100
ES.7266.1	chr12	-	4858	1	FSM	ENSMUSG00000051726.7	ENSMUST00000170580.3	4789	1	-69	0	-69	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGCTTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	17226958	17222100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17222100_17227000
ES.7267.1	chr12	+	1835	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	0	340	0	-340	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTACCAGCACTGTGA	NA	False	NA	74	True	TATAAA	-23	NA	17316545	17334431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.10	chr12	+	3132	11	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-19	-405	intron_retention	FALSE	canonical	0	0	junction_5	874.674024994455	1046	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATGCTGATAAATGTA	NA	False	NA	9	True	AATAAA	-11	NA	17316576	17334366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328952_17329586_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.11	chr12	+	6017	10	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-19	-404	intron_retention	FALSE	canonical	3	2590	junction_3	191.417583722146	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATGCTGATAAATGTAT	NA	False	NA	10	True	AATAAA	-12	NA	17316576	17334367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.15	chr12	+	3774	10	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-10	-389	intron_retention	FALSE	canonical	3	2594	junction_6	185.266441432299	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGAAATTAGTAGCACA	NA	False	NA	25	True	AATAAA	-27	NA	17316585	17334382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.16	chr12	+	5631	11	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-9	-399	intron_retention	FALSE	canonical	3	2590	junction_4	182.083497330208	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316586	17334372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.18	chr12	+	3570	11	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-7	-399	intron_retention	FALSE	canonical	3	2590	junction_5	193.040539783746	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316588	17334372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328646_17328836_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.19	chr12	+	1694	13	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-6	-425	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1074.05225341021	1046	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAAAATGATATTTT	NA	False	NA	-11	True	TTTAAA	-41	NA	17316589	17334346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328521_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330916_17331071_17333200_17333298_17333938
ES.7267.2	chr12	+	2985	12	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	0	-399	intron_retention	FALSE	canonical	3	2590	junction_5	184.09200897539	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316545	17334372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.21	chr12	+	1734	13	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-6	-403	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	799.266273771694	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTGATAAATGTATG	NA	False	NA	11	True	AATAAA	-13	NA	17316589	17334368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324518_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.22	chr12	+	4397	9	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-6	-403	intron_retention	FALSE	canonical	3	2594	junction_6	177.488027765255	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTGATAAATGTATG	NA	False	NA	11	True	AATAAA	-13	NA	17316589	17334368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200
ES.7267.23	chr12	+	3274	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	-6	-1143	-6	1143	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTTGATTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	17316589	17335914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.24	chr12	+	1890	12	NNC	ENSMUSG00000020571.14	novel	1986	11	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	830.932911932264	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTTAGAGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	17316590	17331806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331556_17331601
ES.7267.27	chr12	+	1935	11	FSM	ENSMUSG00000020571.14	ENSMUST00000162936.8	1986	11	46	5	-4	-5	multi-exon	FALSE	canonical	3	2590	junction_6	177.381199680237	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTTAGAGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	17316591	17331806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911
ES.7267.3	chr12	+	2182	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	0	-7	0	7	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTATCTTCTGAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	17316545	17334778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.30	chr12	+	3510	10	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-4	-401	intron_retention	FALSE	non_canonical	0	0	junction_8	919.696568319018	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGATAAATGTATGAA	NA	False	NA	13	True	AATAAA	-15	NA	17316591	17334370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324512_17327198_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333199_17333298_17333938
ES.7267.31	chr12	+	3193	11	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-4	-336	intron_retention	FALSE	canonical	3	2594	junction_7	176.150390291932	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCAGCACTGTGACCTG	NA	False	NA	78	True	TATAAA	-27	NA	17316591	17334435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.33	chr12	+	1743	13	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-2	-401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	808.211721951618	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGATAAATGTATGAA	NA	False	NA	13	True	AATAAA	-15	NA	17316593	17334370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330550_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.36	chr12	+	1715	13	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	1	-403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	808.230457371053	1046	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGCTGATAAATGTATG	NA	False	NA	11	True	AATAAA	-13	NA	17316596	17334368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330635_17330911_17331071_17333200_17333298_17333938
ES.7267.4	chr12	+	1655	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	1	519	1	-519	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCTGCTTGAATGTTC	NA	False	NA	NA	False	AAGAAA	-29	NA	17316546	17334252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.42	chr12	+	5050	11	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-1	-402	intron_retention	FALSE	canonical	3	2590	junction_5	188.692368685117	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCTGATAAATGTATGA	NA	False	NA	12	True	AATAAA	-14	NA	17316607	17334369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17333298_17333938
ES.7267.44	chr12	+	1949	12	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	9	-425	intron_retention	FALSE	canonical	3	2590	junction_6	178.235937977662	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAAAATGATATTTT	NA	False	NA	-11	True	TTTAAA	-41	NA	17316617	17334346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17331071_17333200_17333298_17333938
ES.7267.45	chr12	+	3872	5	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-279	-404	intron_retention	FALSE	canonical	3	2594	junction_2	180.54829686264	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATGCTGATAAATGTAT	NA	False	NA	10	True	AATAAA	-12	NA	17326962	17334367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17329721_17330378_17330464_17330567_17331071_17333200_17333298_17333938
ES.7267.46	chr12	+	1637	8	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	11916	0	1270	0	3prime_fragment	FALSE	canonical	3	2590	junction_1	160.558337036221	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	17328511	17334771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ES.7267.47	chr12	+	4057	2	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13604	411	2958	-411	intron_retention	FALSE	canonical	3	2594	junction_1	0	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGGACAATGCTGATA	NA	False	NA	3	True	AATAAA	-5	NA	17330199	17334360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17330464_17330567
ES.7267.6	chr12	+	6842	7	NIC	ENSMUSG00000020571.14	novel	1986	11	NA	NA	9	-394	intron_retention	FALSE	canonical	3	2594	junction_6	176.470645969489	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATGTATGAAATTAGTA	NA	False	NA	20	True	AATAAA	-22	NA	17316554	17334377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17329721_17330378_17330464_17330567
ES.7267.7	chr12	+	3887	12	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	16	-402	intron_retention	FALSE	canonical	3	2590	junction_6	183.887362217938	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCTGATAAATGTATGA	NA	False	NA	12	True	AATAAA	-14	NA	17316561	17334369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17333298_17333938
ES.7267.8	chr12	+	3867	10	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	17	-399	intron_retention	FALSE	canonical	3	2590	junction_5	192.642315518671	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGATAAATGTATGAAAT	NA	False	NA	15	True	AATAAA	-17	NA	17316562	17334372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328646_17328836_17329721_17330378_17330464_17330567_17331071_17333200_17333298_17333938
ES.7267.9	chr12	+	4037	9	NIC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	-19	-406	intron_retention	FALSE	canonical	3	2594	junction_6	179.520019774954	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAATGCTGATAAATGT	NA	False	NA	8	True	AATAAA	-10	NA	17316576	17334365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17329721_17330378_17330464_17330567_17331071_17333200_17333298_17333938
ES.7268.1	chr12	+	179	1	Intergenic	novelGene_5880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACACACAGAATTAC	1644	False	NA	NA	False	NA	NA	NA	17366588	17366767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17366600_17366800
ES.7269.1	chr12	-	1427	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	-2	0	0	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTCTTGTGTTCTAA	NA	False	NA	0	True	AATAAA	-14	NA	17374731	17334723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ES.7269.2	chr12	-	2683	9	ISM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	21829	0	5512	0	3prime_fragment	FALSE	canonical	3	13	junction_8	6.31961232988227	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTCTTGTGTTCT	NA	False	NA	-2	True	AATAAA	-12	NA	17352902	17334725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121
ES.7269.3	chr12	-	240	1	Intergenic	novelGene_5879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGCCTTTGAGGCTT	2727	False	NA	NA	False	AAAAAG	-31	NA	17345669	17345429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17345400_17345700
ES.727.1	chr1	-	1880	4	FSM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	732	3394	123	-3261	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGCCTGCGTCCAGGC	NA	False	NA	NA	False	AATACA	-13	NA	72913311	72900484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_72901668_72902301_72902422_72903009_72903240_72912964
ES.7270.1	chr12	-	597	3	NNC	ENSMUSG00000114024.2	novel	279	3	NA	NA	-21	431	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGGCTCGAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	17398395	17393970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_17394304_17394398_17394550_17398282
ES.7271.1	chr12	+	3080	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	-31	-28	-31	28	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTAGTTATTTTCTGAT	NA	False	NA	42	True	AATAAA	-45	NA	17398427	17480124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.11	chr12	+	2992	21	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	63.8275802455334	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17398469	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402724_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.12	chr12	+	1873	1	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	22	-79743	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAAATCCAGAATATATG	NA	False	NA	NA	False	NA	NA	NA	17398480	17400353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17398500_17400400
ES.7271.13	chr12	+	3013	21	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	63.0008730098242	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCTATTTGTTTAGCT	NA	False	NA	12	True	AATAAA	-15	NA	17398486	17480094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400494_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.14	chr12	+	2937	21	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	63.5402234808786	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17398494	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452154_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.15	chr12	+	2700	18	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	36	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	90.4412482065713	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGCTATTTGTTTAGC	NA	False	NA	11	True	AATAAA	-14	NA	17398494	17480093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17423562_17423630_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.16	chr12	+	3096	22	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	81.4000228428768	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17398494	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17478805_17478918_17479115
ES.7271.17	chr12	+	2895	20	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.4083275086531	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCTATTTGTTTAGCT	NA	False	NA	12	True	AATAAA	-15	NA	17398495	17480094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17408151_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.18	chr12	+	2737	22	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	44	28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	62.5021722978499	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTAGTTATTTTCTGAT	NA	False	NA	42	True	AATAAA	-45	NA	17398502	17480124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115_17479597_17479864
ES.7271.19	chr12	+	4760	11	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	18414	-3	intron_retention	FALSE	canonical	3	245	junction_1	18.7392635927883	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGCTATTTGTTTAGC	512	False	NA	11	True	AATAAA	-14	NA	17416872	17480093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.2	chr12	+	3139	22	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	81.4000228428768	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17398429	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17478805_17478896_17479115
ES.7271.20	chr12	+	5457	9	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	21614	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	123.771967747144	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGCTATTTGTTTAGC	3712	False	NA	11	True	AATAAA	-14	NA	17420072	17480093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17423630_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474758_17479115
ES.7271.21	chr12	+	8937	9	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	23804	-1	intron_retention	FALSE	canonical	3	260	junction_4	12.8883426009708	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	5902	False	NA	13	True	AATAAA	-16	NA	17422262	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.22	chr12	+	2807	1	Intergenic	novelGene_5881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCTATCCCCGAGGGA	NA	False	NA	NA	False	NA	NA	NA	17434728	17437535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17434700_17437500
ES.7271.23	chr12	+	2271	7	ISM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	56013	1	56013	-1	3prime_fragment	FALSE	canonical	3	260	junction_2	14.8511129399636	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17454471	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.4	chr12	+	2994	20	NIC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	65.4083275086531	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCTATTTGTTTAGCT	NA	False	NA	12	True	AATAAA	-15	NA	17398445	17480094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7271.5	chr12	+	2848	22	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	62.5021722978499	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTATTTGTTTAGCTT	NA	False	NA	13	True	AATAAA	-16	NA	17398454	17480095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115_17479649_17479824
ES.7271.7	chr12	+	3009	21	NNC	ENSMUSG00000061458.10	novel	3021	21	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	64.0418613096153	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398461	17480096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456816_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ES.7272.1	chr12	-	4569	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCAGGCACGGTGGGAC	NA	False	NA	NA	False	NA	NA	NA	17425600	17421031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_17421000_17425600
ES.7272.2	chr12	-	2850	3	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7072	False	NA	NA	False	NA	NA	NA	17452302	17421061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_17423628_17429246_17429301_17452072
ES.7272.3	chr12	-	4144	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	7072	False	NA	NA	False	NA	NA	NA	17452302	17448158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_17448200_17452300
ES.7272.4	chr12	-	3944	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTATAGTTGCTGACT	7072	False	NA	NA	False	NA	NA	NA	17452302	17448358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_17448400_17452300
ES.7273.1	chr12	-	2171	1	Intergenic	novelGene_5882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACAGGCTCCACTTCC	NA	False	NA	NA	False	NA	NA	NA	17509378	17507207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17507200_17509400
ES.7273.2	chr12	-	1953	1	Intergenic	novelGene_5883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGACAGGCTCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	17509359	17507406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17507400_17509400
ES.7273.3	chr12	-	6346	1	Intergenic	novelGene_5884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTTGTTGAACTTT	NA	False	NA	NA	False	AATAAA	-22	NA	17514670	17508324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17508300_17514700
ES.7273.4	chr12	-	2091	2	Intergenic	novelGene_5885	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTAGGTTGTTGAACTT	NA	False	NA	NA	False	AATAAA	-21	NA	17511024	17508325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17508571_17509178
ES.7273.5	chr12	-	5087	3	Intergenic	novelGene_5886	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTAGGTTGTTGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	17513891	17508327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17508571_17508845_17508977_17509178
ES.7273.6	chr12	-	607	3	Intergenic	novelGene_5887	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	5.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTATGTGTAGGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	17514670	17508331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17508571_17509178_17509309_17514432
ES.7273.7	chr12	-	5114	2	Intergenic	novelGene_5888	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCATGTCTTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	17514666	17509348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17511200_17511403
ES.7273.8	chr12	-	2369	1	Intergenic	novelGene_5889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAATGCTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	17514497	17512128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17512100_17514500
ES.7274.1	chr12	+	2288	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	-79	-1	-79	1	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGAATGTTTGCAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	17594715	17601086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.12	chr12	+	2347	10	NIC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	-4	intron_retention	FALSE	canonical	3	389	junction_9	338.212293619785	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594973	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.13	chr12	+	2424	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	491.346455001942	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGTGTTGTAAATCT	NA	False	NA	18	True	AATAAA	-13	NA	17594973	17601501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595170_17597117_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.14	chr12	+	1883	11	NIC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	500.993772416384	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594973	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.16	chr12	+	925	4	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	621.895132281605	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594973	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595104_17599668_17599782_17599863_17600079_17600607
ES.7274.17	chr12	+	2005	10	NIC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	-4	intron_retention	FALSE	canonical	1	1	junction_4	532.385291650166	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594973	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17598309_17598445_17598545_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.18	chr12	+	2086	13	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	578.702835851201	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGGAATGTTTGCAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	17594973	17601086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595170_17595797_17595854_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.19	chr12	+	1898	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	112	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	491.048061137713	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17595084	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597642_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.2	chr12	+	2513	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	111	-416	-67	-5	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGTGTTGTAAATCT	NA	False	NA	18	True	AATAAA	-13	NA	17594905	17601501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.20	chr12	+	2041	12	NNC	ENSMUSG00000011179.9	novel	1982	8	NA	NA	314	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	492.020291189448	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17595286	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595506_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.21	chr12	+	1126	6	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	3749	11	-97	-4	3prime_fragment	FALSE	canonical	3	389	junction_5	430.821355088162	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17598543	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7274.3	chr12	+	1132	5	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	-56	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	570.456396230246	592	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594916	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17595165_17597269_17597402_17597633_17597704_17599863_17600079_17600607
ES.7274.8	chr12	+	2243	10	NIC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	0	-4	intron_retention	FALSE	canonical	3	389	junction_9	336.288823542362	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTGGGCATCAGGGA	NA	False	NA	NA	False	AATAAA	-9	NA	17594972	17601074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599782_17599863_17600079_17600607
ES.7274.9	chr12	+	4481	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	178	-2451	0	2030	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCGACTCTGGTCTGAAT	NA	False	NA	NA	False	NA	NA	NA	17594972	17603536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ES.7275.1	chr12	-	159	1	Intergenic	novelGene_5890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	17642903	17642744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17642700_17642900
ES.7276.1	chr12	-	177	1	Intergenic	novelGene_5891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATCTAATTTAAT	NA	False	NA	NA	False	NA	NA	NA	17652887	17652710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17652700_17652900
ES.7277.1	chr12	+	178	1	Intergenic	novelGene_5892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	17681575	17681753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17681600_17681800
ES.7278.1	chr12	-	170	1	Intergenic	novelGene_5893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAATAAAAAGAATAGA	NA	False	NA	NA	False	NA	NA	NA	17697980	17697810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17697800_17698000
ES.7279.1	chr12	-	158	1	Intergenic	novelGene_5894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACATAAAATAAAAAT	2728	False	NA	NA	False	NA	NA	NA	17713114	17712956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17713000_17713100
ES.728.1	chr1	+	3491	8	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.451753951452626	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCTTTTGGTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	72976048	72991901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_72976142_72976235_72976337_72976514_72976653_72979654_72979700_72980842_72980978_72981912_72982051_72987547_72987721_72989233
ES.7280.1	chr12	+	1585	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-61	2	-61	-2	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	8563	False	NA	15	True	AATAAA	-3	NA	17740795	17841932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
ES.7280.2	chr12	+	1657	5	NIC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	-56	-11	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	31.8541598539343	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	8568	False	NA	6	True	ATTAAA	-7	NA	17740800	17841923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_17741048_17817214_17817301_17836147_17836550_17837545_17837652_17841107
ES.7280.3	chr12	+	1550	4	NNC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	-41	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	33.95094500403	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	8583	False	NA	6	True	ATTAAA	-7	NA	17740815	17841923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17741048_17836147_17836544_17837545_17837652_17841107
ES.7280.4	chr12	+	1502	5	FSM	ENSMUSG00000071379.3	ENSMUST00000222944.2	697	5	-9	-796	-9	-11	multi-exon	FALSE	canonical	3	5	junction_1	35.2304910553344	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	6	True	ATTAAA	-7	NA	17778217	17841923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_17778310_17817214_17817301_17836147_17836550_17837545_17837652_17841107
ES.7281.1	chr12	+	3107	10	Intergenic	novelGene_5895	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	6.142344427149	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATGCTTTAACGCAA	NA	False	NA	NA	False	NA	NA	NA	17854325	17915735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17854483_17864918_17865046_17865245_17865307_17881467_17881555_17899557_17899730_17900700_17900885_17901369_17901483_17907212_17908695_17909653_17909973_17915330
ES.7281.10	chr12	+	2493	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-350	-507	intron_retention	FALSE	canonical	1	4	junction_1	62.8348806175537	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17931847	17954169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950611_17950788_17950987_17951049_17952389
ES.7281.11	chr12	+	1762	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000113536.2	novel	540	3	NA	NA	-312	-6	multi-exon	FALSE	canonical	1	2	junction_3	1.4142135623731	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	17931885	17989623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17983373_17983758_17985148_17985255_17988789
ES.7281.12	chr12	+	3619	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-295	723	intron_retention	FALSE	canonical	3	43	junction_1	46.5999523128035	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	17931902	17955399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17952389
ES.7281.13	chr12	+	2275	5	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-281	-533	intron_retention	FALSE	non_canonical	0	0	junction_1	58.6658972487424	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17931916	17954143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932113_17932186_17932324_17950660_17950788_17950987_17951049_17952389
ES.7281.14	chr12	+	3682	3	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-247	-507	intron_retention	FALSE	canonical	3	43	junction_1	57	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17931950	17954169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950660_17950788_17950987
ES.7281.15	chr12	+	2985	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-246	-533	intron_retention	FALSE	canonical	3	17	junction_3	60.8020467491752	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17931951	17954143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17951718
ES.7281.16	chr12	+	2119	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10221	-497	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATTCTATGAATGTAAT	NA	False	NA	13	True	NA	NA	NA	17942168	17954179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
ES.7281.17	chr12	+	2147	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10221	-518	intron_retention	FALSE	canonical	3	10	junction_1	60.256857608814	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAACATACTGGA	NA	False	NA	-8	True	NA	NA	NA	17942168	17954158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950611_17950788_17950987_17951049_17952389
ES.7281.18	chr12	+	3338	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10221	722	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	17942168	17955398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
ES.7281.19	chr12	+	2167	5	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10198	-533	intron_retention	FALSE	canonical	0	0	junction_4	61.1432743643976	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17942191	17954143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17951718_17951826_17952389
ES.7281.2	chr12	+	2033	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-97918	-517	intron_retention	FALSE	canonical	0	0	junction_1	50.1663898109747	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAACATACTGGAG	NA	False	NA	-7	True	NA	NA	NA	17854471	17954159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17854547_17864918_17865046_17950987_17951049_17952389
ES.7281.20	chr12	+	515	4	NNC	ENSMUSG00000113642.2	novel	550	2	NA	NA	-8532	-160527	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	60.3342541366198	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTTTCTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	17942202	17951938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17951718
ES.7281.21	chr12	+	3412	3	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10184	-508	intron_retention	FALSE	canonical	3	46	junction_1	55.5	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACTGGAGAGAAATTCT	NA	False	NA	2	True	NA	NA	NA	17942205	17954168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987
ES.7281.22	chr12	+	2710	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10177	-533	intron_retention	FALSE	canonical	3	17	junction_3	60.3342541366198	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17942212	17954143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17951718
ES.7281.23	chr12	+	2485	4	NNC	ENSMUSG00000113642.2	novel	550	2	NA	NA	-8516	-131362	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	65.5591336123351	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	17942218	17981103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17978897
ES.7281.24	chr12	+	8390	1	Genic_Genomic	ENSMUSG00000114025.2_ENSMUSG00000113642.2	novel	NA	NA	NA	NA	-4955	-507	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17945779	17954169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_17945800_17954200
ES.7281.25	chr12	+	5880	3	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-5641	-507	intron_retention	FALSE	canonical	3	95	junction_2	31	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17946748	17954169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_17950788_17950987_17951049_17952389
ES.7281.26	chr12	+	4579	1	Intergenic	novelGene_5902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	17976524	17981103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17976500_17981100
ES.7281.3	chr12	+	2475	5	Intergenic	novelGene_5896	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	1.08972473588517	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTGTCTCTCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	17862342	17901670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17862430_17864918_17865046_17865245_17865307_17881467_17881555_17899557
ES.7281.4	chr12	+	4248	9	Intergenic	novelGene_5897	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	2.05775970414429	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGCTTTAACGCAAGT	NA	False	NA	NA	False	NA	NA	NA	17862342	17915737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17862430_17864918_17865046_17865245_17865307_17881467_17881555_17899557_17899730_17901369_17901483_17905819_17908695_17909653_17909973_17915330
ES.7281.5	chr12	+	973	7	Intergenic	novelGene_5898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	2.35702260395516	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGACTGGTGGTCGTGT	NA	False	NA	NA	False	NA	NA	NA	17862343	17907539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17862430_17864918_17865046_17865245_17865307_17881467_17881555_17899557_17899730_17901369_17901483_17907212
ES.7281.6	chr12	+	2862	10	Intergenic	novelGene_5899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_5	2.49443825784929	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGCTTTAACGCAAG	NA	False	NA	NA	False	NA	NA	NA	17864917	17915736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17865046_17865245_17865307_17881467_17881555_17899557_17899730_17900700_17900885_17901369_17901483_17907212_17907455_17907544_17908695_17909653_17909973_17915330
ES.7281.7	chr12	+	4836	3	Intergenic	novelGene_5900	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	0.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAATATTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	17904895	17916048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_17908695_17909653_17909973_17915330
ES.7281.8	chr12	+	2577	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-483	-507	intron_retention	FALSE	canonical	3	43	junction_1	46.5999523128035	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATTCTA	NA	False	NA	3	True	NA	NA	NA	17931714	17954169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17952389
ES.7281.9	chr12	+	2423	3	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-465	-516	intron_retention	FALSE	canonical	1	6	junction_1	44.5	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACATACTGGAGA	NA	False	NA	-6	True	NA	NA	NA	17931732	17954160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_17932324_17950987_17951049_17952389
ES.7282.1	chr12	-	358	1	Intergenic	novelGene_5901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGATGAAGATAGAGGTC	NA	False	NA	NA	False	NA	NA	NA	17909718	17909360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17909400_17909700
ES.7283.1	chr12	-	5478	1	FSM	ENSMUSG00000113612.2	ENSMUST00000222538.2	161	1	-4811	-506	-4811	506	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTTACAAAAACACATTT	NA	False	NA	NA	False	NA	NA	NA	17950284	17944806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_17944800_17950300
ES.7284.1	chr12	-	184	1	Intergenic	novelGene_5903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	17998912	17998728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_17998700_17998900
ES.7285.1	chr12	+	156	1	Intergenic	novelGene_5904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATTTAAAA	8565	False	NA	NA	False	NA	NA	NA	18001439	18001595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18001400_18001600
ES.7286.1	chr12	+	2272	4	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-301	-7	multi-exon	TRUE	canonical	0	0	junction_2	5.71547606649408	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	18042832	18115604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18111968_18112874_18113722_18113829_18114770
ES.7286.10	chr12	+	1431	5	NNC	ENSMUSG00000113416.2	novel	1815	2	NA	NA	-8577	141357	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.59807621135332	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATTCACATGTCGA	NA	False	NA	NA	False	AATAAA	-18	NA	18065490	18218825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18065636_18074048_18074176_18074375_18074437_18100995_18102048_18218779
ES.7286.12	chr12	+	4822	4	Fusion	ENSMUSG00000113416.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-2869	-7	multi-exon	FALSE	canonical	0	0	junction_2	8.28653526310404	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	18071198	18115604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18074176_18111968_18112874_18113722_18113829_18114770
ES.7286.13	chr12	+	6263	4	Genic_Genomic	ENSMUSG00000113199.2	novel	126	1	NA	NA	-286	20355	multi-exon	FALSE	canonical	2	6	junction_3	5.8878405775519	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18185900	18206667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18186313_18199264_18199392_18199593_18199655_18201004
ES.7286.14	chr12	+	1426	5	Fusion	ENSMUSG00000113199.2_ENSMUSG00000113360.2	novel	581	3	NA	NA	-263	242016	multi-exon	TRUE	non_canonical	0	0	junction_3	8.2915619758885	120	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCAGCATTCACCCT	NA	False	NA	NA	False	AATAAA	-20	NA	18185923	18483640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18186313_18199264_18199392_18199593_18199655_18241527_18242344_18483607
ES.7286.15	chr12	+	1277	4	Genic_Genomic	ENSMUSG00000113199.2	novel	126	1	NA	NA	-246	14243	multi-exon	FALSE	canonical	3	6	junction_3	5.8878405775519	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTTTCTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	18185940	18200555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18186313_18199264_18199392_18199593_18199655_18199838
ES.7286.16	chr12	+	1534	1	FSM	ENSMUSG00000113402.2	ENSMUST00000221998.2	324	1	-297	-913	-297	913	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTATTTTTCTCTCCTG	NA	False	NA	NA	False	AAGAAA	-45	NA	18437458	18438992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_18437500_18439000
ES.7286.17	chr12	+	1049	4	Genic_Genomic	ENSMUSG00000113402.2	novel	324	1	NA	NA	-265	31096	multi-exon	FALSE	canonical	0	0	junction_3	7.84573486395988	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTTGAGAGGTGGAGT	NA	False	NA	NA	False	ATTAAA	-20	NA	18437490	18469175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18437882_18452998_18453126_18453327_18453389_18468705
ES.7286.18	chr12	+	960	1	Intergenic	novelGene_5906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	18455783	18456743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18455800_18456700
ES.7286.2	chr12	+	1080	4	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-300	-31	multi-exon	FALSE	canonical	2	4	junction_3	16.5193489244852	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGCAGTGAGTAACAATAAA	NA	False	NA	-13	True	ATTAAA	-14	NA	18042833	18112434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18074048_18074176_18074375_18074437_18111968
ES.7286.3	chr12	+	1271	3	Genic_Genomic	ENSMUSG00000113234.2	novel	126	1	NA	NA	-299	29923	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCGTGAATATGAATATCA	NA	False	NA	NA	False	AATAAA	-19	NA	18042834	18073182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18043260_18062790_18062892_18072437
ES.7286.4	chr12	+	3108	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-288	-7	intron_retention	FALSE	canonical	3	7	junction_2	3.5	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	18042845	18115604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18111968_18113829_18114770
ES.7286.5	chr12	+	3945	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2	novel	1815	2	NA	NA	-286	1707	multi-exon	FALSE	canonical	0	0	junction_2	20	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18042847	18079175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18074048_18074176_18075769
ES.7286.6	chr12	+	3240	4	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-286	0	intron_retention	FALSE	canonical	3	7	junction_3	13.5728487143349	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	AATAAA	-1	NA	18042847	18115611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18074048_18074176_18111968_18113829_18114770
ES.7286.7	chr12	+	1667	2	Genic_Genomic	ENSMUSG00000113234.2	novel	126	1	NA	NA	-280	30439	multi-exon	FALSE	canonical	2	3	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATACACCCTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	18042853	18073698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18043260_18072437
ES.7286.8	chr12	+	3963	4	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2	novel	1815	2	NA	NA	-244	1706	multi-exon	FALSE	canonical	1	1	junction_3	17.326921891156	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	18042889	18079174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18074048_18074176_18074375_18074437_18075769
ES.7286.9	chr12	+	1006	5	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113416.2	novel	1815	2	NA	NA	-243	685	multi-exon	FALSE	canonical	0	0	junction_4	16.4677715553745	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTATGAATGTCGTCA	NA	False	NA	NA	False	NA	NA	NA	18042890	18078153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18043260_18074048_18074176_18074375_18074437_18075769_18076093_18078027
ES.7287.1	chr12	-	806	1	Intergenic	novelGene_5905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTTCTGAGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	18073672	18072866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_18072900_18073700
ES.7288.1	chr12	+	156	1	Intergenic	novelGene_5907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	18543977	18544133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18544000_18544100
ES.7289.1	chr12	+	151	1	Intergenic	novelGene_5908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	18563590	18563741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18563600_18563700
ES.729.1	chr1	+	180	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	73931402	73931582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_73931400_73931600
ES.7290.1	chr12	+	2627	6	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-134	407	multi-exon	TRUE	non_canonical	0	0	junction_1	11.1067547015319	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTGGAGAGAAATCTA	NA	False	NA	-1	True	NA	NA	NA	18564376	18700406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564588_18660234_18660512_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.10	chr12	+	3836	5	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2431	4	NA	NA	-50	1700	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18564460	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.11	chr12	+	7370	8	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-28	396	multi-exon	TRUE	non_canonical	0	0	junction_1	0.349927106111883	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAAAATCATACTGG	NA	False	NA	-12	True	NA	NA	NA	18564482	18700395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564580_18660226_18660512_18685156_18685354_18687175_18687731_18692372_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.12	chr12	+	3712	7	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	43	1703	multi-exon	TRUE	non_canonical	0	0	junction_1	10.3668810267227	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTGGTTGTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	18564589	18701702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564717_18660363_18660512_18696480_18696608_18696807_18696869_18698202_18698754_18698836_18699174_18699341
ES.7290.13	chr12	+	3902	5	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-341	1701	multi-exon	FALSE	non_canonical	0	0	junction_2	11.9869720947369	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGTATTTGGTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	18660043	18701700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18699090_18699341
ES.7290.14	chr12	+	4113	4	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-299	1702	multi-exon	FALSE	canonical	0	0	junction_2	12.9700509722291	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTATTTGGTTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	18660085	18701701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202
ES.7290.15	chr12	+	1613	5	Genic_Genomic	ENSMUSG00000113724.2	novel	217	1	NA	NA	-264	419646	multi-exon	FALSE	canonical	0	0	junction_3	8.61684396980704	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	18660120	19080247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18785735_18785863_18920741_18920803_19078667_19079608_19080153
ES.7290.16	chr12	+	3770	6	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-209	1700	multi-exon	FALSE	non_canonical	0	0	junction_2	11.1067547015319	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18660175	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18698754_18698836_18699174_18699341
ES.7290.17	chr12	+	3207	5	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-141	1207	multi-exon	FALSE	canonical	0	0	junction_2	11.9869720947369	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCATTGAACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	18660243	18701206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.18	chr12	+	3645	5	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-83	1703	multi-exon	FALSE	canonical	0	0	junction_2	11.9869720947369	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTGGTTGTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	18660301	18701702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.19	chr12	+	4202	7	Genic_Genomic	ENSMUSG00000113724.2_ENSMUSG00000116815.2	novel	1785	1	NA	NA	-83	1703	multi-exon	FALSE	non_canonical	0	0	junction_1	0.763762615825973	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTGGTTGTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	18660301	18701702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18660512_18687175_18687731_18696480_18696608_18696807_18696869_18698202_18698754_18698836_18699174_18699341
ES.7290.2	chr12	+	3307	8	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-73	396	multi-exon	FALSE	non_canonical	0	0	junction_1	0.728431359084683	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAAAATCATACTGG	NA	False	NA	-12	True	NA	NA	NA	18564437	18700395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564654_18660300_18660512_18685156_18685354_18687175_18687731_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.20	chr12	+	3718	5	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	-10760	1709	multi-exon	FALSE	non_canonical	0	0	junction_2	0.82915619758885	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGTTGTTGTTGTTGC	NA	False	NA	NA	False	AATAAA	-21	NA	18687454	18701708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18687731_18696480_18696608_18696807_18696869_18698202_18699090_18699341
ES.7290.21	chr12	+	2503	4	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	-10274	396	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAAAATCATACTGG	NA	False	NA	-12	True	NA	NA	NA	18687940	18700395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18688063_18696480_18696608_18696807_18696869_18698202
ES.7290.22	chr12	+	8568	5	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	-5542	3026	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	18692672	18703025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18696608_18696807_18696869_18698202_18698754_18698836_18699174_18699341
ES.7290.23	chr12	+	2053	2	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	93	614	multi-exon	FALSE	canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTTTCACAGTTAT	NA	False	NA	NA	False	NA	NA	NA	18698307	18700613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18698442_18698694
ES.7290.24	chr12	+	2712	2	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	363	1710	multi-exon	TRUE	non_canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTGTTGTTGCA	NA	False	NA	NA	False	AATAAA	-22	NA	18698577	18701709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18698920_18699339
ES.7290.25	chr12	+	3244	3	Genic_Genomic	ENSMUSG00000116815.2	novel	1785	1	NA	NA	914	90704	multi-exon	TRUE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTGTTGTTGTTGCA	NA	False	NA	NA	False	AATAAA	-22	NA	18699128	18790703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_18699429_18699932_18699976_18787802
ES.7290.26	chr12	+	2520	5	NNC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-340	-32007	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	13.6816482925121	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCACAAATTTATTGTC	NA	False	NA	12	True	NA	NA	NA	18903500	18924497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18903999_18920412_18920540_18920741_18920803_18922243_18922627_18923046
ES.7290.27	chr12	+	2615	5	NNC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-326	-32150	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	13.6816482925121	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	18903514	18924354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18903999_18920412_18920540_18920741_18920803_18922243_18923331_18923498
ES.7290.28	chr12	+	1392	3	NIC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-270	5614	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGTTGCCCCAAGCAC	NA	False	NA	NA	False	AATAAA	-17	NA	18903570	18962118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_18903999_18957697_18957804_18961260
ES.7290.29	chr12	+	1716	2	FSM	ENSMUSG00000113778.2	ENSMUST00000222888.2	759	2	-269	-688	-269	688	multi-exon	FALSE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAGTAAAGTAGTTA	NA	False	NA	NA	False	NA	NA	NA	18903571	18957192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_18903999_18955903
ES.7290.3	chr12	+	3860	6	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-73	1700	multi-exon	TRUE	non_canonical	0	0	junction_1	11.1067547015319	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18564437	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564654_18660300_18660512_18696480_18696608_18696807_18696869_18698202_18699090_18699341
ES.7290.30	chr12	+	3173	3	Fusion	ENSMUSG00000113857.2_ENSMUSG00000112970.2	novel	575	3	NA	NA	-300	747	intron_retention	FALSE	canonical	0	0	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGAGTTTCCCATGT	NA	False	NA	NA	False	AATAAA	-5	NA	18903571	18962106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18903999_18955903_18957804_18961260
ES.7290.31	chr12	+	2375	6	NNC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-267	-32014	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.1314242555022	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCCTTTTCACAAATT	NA	False	NA	5	True	NA	NA	NA	18903573	18924490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18903999_18920412_18920540_18920741_18920803_18922243_18922627_18923046_18923386_18923450
ES.7290.32	chr12	+	2994	5	NNC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-241	-32150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	16.3171688720807	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	18903599	18924354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18903999_18919948_18920540_18920741_18920803_18922243_18923331_18923498
ES.7290.34	chr12	+	2307	6	NNC	ENSMUSG00000113778.2	novel	759	2	NA	NA	-215	-32012	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	15.1314242555022	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTTTTCACAAATTTA	NA	False	NA	7	True	NA	NA	NA	18903625	18924492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_18903999_18920412_18920540_18920741_18920803_18922243_18922627_18923046_18923374_18923456
ES.7290.35	chr12	+	2300	5	Intergenic	novelGene_5912	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	15.4353490404331	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACACACACACACAC	NA	False	NA	NA	False	NA	NA	NA	18914097	18924354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18914267_18920412_18920540_18920741_18920803_18922243_18923331_18923498
ES.7290.36	chr12	+	2213	5	Intergenic	novelGene_5913	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	16.3171688720807	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACAAATTTATTGTCT	NA	False	NA	13	True	NA	NA	NA	18914125	18924498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18914267_18920363_18920540_18920741_18920803_18922243_18922627_18923046
ES.7290.37	chr12	+	3256	5	Intergenic	novelGene_5914	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	15.4353490404331	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	18914152	18925617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18914267_18920412_18920540_18920741_18920803_18922243_18922627_18923046
ES.7290.38	chr12	+	2727	5	Intergenic	novelGene_5915	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	15.4353490404331	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTTTTTATGTATATT	NA	False	NA	NA	False	NA	NA	NA	18914153	18925089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18914267_18920412_18920540_18920741_18920803_18922243_18922627_18923046
ES.7290.39	chr12	+	1382	2	Intergenic	novelGene_5916	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACAAATTTATTGTCT	NA	False	NA	13	True	NA	NA	NA	18922446	18924498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18922507_18923176
ES.7290.4	chr12	+	3765	6	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2431	4	NA	NA	-66	1700	multi-exon	FALSE	non_canonical	0	0	junction_1	0.4	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18564444	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564624_18564710_18564865_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.40	chr12	+	6166	1	Intergenic	novelGene_5917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAAAAGAGCCAGGCTT	NA	False	NA	NA	False	NA	NA	NA	18943826	18949992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18943800_18950000
ES.7290.41	chr12	+	2549	1	Intergenic	novelGene_5918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATAGTGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	18950858	18953407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_18950900_18953400
ES.7290.5	chr12	+	3747	7	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-66	1700	multi-exon	FALSE	non_canonical	0	0	junction_1	10.3668810267227	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18564444	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564654_18660300_18660512_18696480_18696608_18696807_18696869_18698202_18699205_18699489_18701276_18701348
ES.7290.6	chr12	+	2536	6	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-66	385	multi-exon	TRUE	non_canonical	0	0	junction_1	11.1067547015319	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATTGAAATATAAA	NA	False	NA	-23	True	NA	NA	NA	18564444	18700384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564582_18660229_18660512_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.7	chr12	+	3114	7	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-66	407	multi-exon	FALSE	non_canonical	0	0	junction_1	0.763762615825973	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATACTGGAGAGAAATCTA	NA	False	NA	-1	True	NA	NA	NA	18564444	18700406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564654_18660300_18660512_18687175_18687731_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.8	chr12	+	2546	6	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2542	4	NA	NA	-61	396	multi-exon	TRUE	non_canonical	0	0	junction_1	11.1067547015319	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAAAATCATACTGG	NA	False	NA	-12	True	NA	NA	NA	18564449	18700395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564672_18660315_18660512_18696480_18696608_18696807_18696869_18698202_18698442_18698694
ES.7290.9	chr12	+	3840	5	Fusion	ENSMUSG00000073197.10_ENSMUSG00000116815.2	novel	2431	4	NA	NA	-53	1700	multi-exon	FALSE	non_canonical	0	0	junction_1	0.433012701892219	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	18564457	18701699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_18564865_18696480_18696608_18696807_18696869_18698202_18699090_18699341
ES.7291.1	chr12	-	2968	1	Intergenic	novelGene_5909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGGCAAAGGTTCAC	NA	False	NA	NA	False	NA	NA	NA	18749658	18746690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_18746700_18749700
ES.7292.1	chr12	-	329	1	Intergenic	novelGene_5910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTTGTATTTCTATGA	NA	False	NA	NA	False	NA	NA	NA	18906562	18906233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_18906200_18906600
ES.7292.2	chr12	-	160	1	Intergenic	novelGene_5911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	18906562	18906402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_18906400_18906600
ES.7293.1	chr12	+	4602	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	-314	-6186	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCTCCTGATCCAG	NA	False	NA	NA	False	NA	NA	NA	19094392	19098994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19094400_19099000
ES.7293.2	chr12	+	2395	5	NNC	ENSMUSG00000114188.2	novel	603	4	NA	NA	-314	1422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.4142135623731	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTCTGCATTCTCACA	NA	False	NA	NA	False	NA	NA	NA	19094392	19106602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19094822_19098760_19098915_19099553_19099692_19100665_19100722_19104984
ES.7293.3	chr12	+	3035	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	-302	-7741	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAGATGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	19094404	19097439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19094400_19097400
ES.7293.4	chr12	+	3277	5	NNC	ENSMUSG00000114188.2	novel	603	4	NA	NA	-300	2318	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.4142135623731	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACCTGTGTTTATTTCC	NA	False	NA	NA	False	NA	NA	NA	19094406	19107498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19094822_19098760_19098915_19099553_19099692_19100665_19100722_19104984
ES.7293.5	chr12	+	5610	6	NNC	ENSMUSG00000114188.2	novel	603	4	NA	NA	-296	2308	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1.67332005306815	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGGCGTGACCTGT	NA	False	NA	NA	False	NA	NA	NA	19094410	19107488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19097329_19098760_19098915_19099553_19099692_19100665_19100722_19104984_19106799_19106958
ES.7293.6	chr12	+	6242	3	NIC	ENSMUSG00000114188.2	novel	603	4	NA	NA	-281	1419	intron_retention	FALSE	canonical	0	0	junction_2	2.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCCTCTGCATTCTC	NA	False	NA	NA	False	NA	NA	NA	19094425	19106599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_19098915_19099553_19099692_19104984
ES.7293.7	chr12	+	5062	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	-250	-5662	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	19094456	19099518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19094500_19099500
ES.7293.8	chr12	+	4454	4	NNC	ENSMUSG00000114188.2	novel	603	4	NA	NA	2452	2308	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.942809041582063	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGGCGTGACCTGT	NA	False	NA	NA	False	NA	NA	NA	19097158	19107488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19098915_19099553_19099692_19100665_19100722_19104984
ES.7293.9	chr12	+	5206	1	Genic_Genomic	ENSMUSG00000114188.2	novel	NA	NA	NA	NA	7576	2308	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGGCGTGACCTGT	NA	False	NA	NA	False	NA	NA	NA	19102282	19107488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19102300_19107500
ES.7294.1	chr12	+	2898	4	Intergenic	novelGene_5919	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTTGTTGTTGTTGC	NA	False	NA	16	True	AATAAA	-21	NA	19116357	19127644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
ES.7294.10	chr12	+	2469	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-216	-888	multi-exon	FALSE	non_canonical	0	0	junction_1	12.2474487139159	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	19338346	19354304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604
ES.7294.11	chr12	+	2530	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-93	-704	multi-exon	FALSE	non_canonical	0	0	junction_1	12.2474487139159	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTCCATTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	19338469	19354488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604
ES.7294.12	chr12	+	3184	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-62	9912	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9614813968157	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGGCTCCATGCTTAA	NA	False	NA	NA	False	NA	NA	NA	19338500	19361177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19358608
ES.7294.13	chr12	+	6290	3	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-62	756	multi-exon	FALSE	canonical	3	17	junction_1	6.5	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTGGTTGTTG	NA	False	NA	13	True	AATAAA	-14	NA	19338500	19355948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19339930_19350884_19351012_19351214
ES.7294.14	chr12	+	1237	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-62	7840	multi-exon	FALSE	non_canonical	0	0	junction_1	10.9857862713599	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGTGAGTGATATCT	NA	False	NA	NA	False	AAAAAG	-12	NA	19338500	19359105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19357966_19358092_19358608
ES.7294.15	chr12	+	4067	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-62	754	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTTGT	NA	False	NA	11	True	AATAAA	-12	NA	19338500	19355946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.16	chr12	+	1494	3	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-61	890	multi-exon	FALSE	non_canonical	0	0	junction_1	15	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTTTCTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	19338501	19352155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214
ES.7294.17	chr12	+	1143	4	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-61	1868	multi-exon	FALSE	non_canonical	0	0	junction_1	12.2474487139159	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGAGTGTAATCA	NA	False	NA	NA	False	NA	NA	NA	19338501	19353133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604
ES.7294.18	chr12	+	3965	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-61	763	multi-exon	FALSE	non_canonical	0	0	junction_1	12.2474487139159	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGTTGTTGTTGTTGC	NA	False	NA	20	True	AATAAA	-21	NA	19338501	19355955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604
ES.7294.19	chr12	+	4013	6	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-61	753	multi-exon	FALSE	non_canonical	0	0	junction_1	11.3595774569303	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	10	True	AATAAA	-11	NA	19338501	19355945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19350884_19351012_19351214_19351276_19352604_19355204_19355255
ES.7294.2	chr12	+	1794	4	Intergenic	novelGene_5920	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAATGTTGTCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	19116384	19126567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
ES.7294.20	chr12	+	3351	9	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-60	1065	multi-exon	TRUE	non_canonical	0	0	junction_1	7.03451313169575	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	AATAAA	-3	NA	19338502	19614160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540671_19547479_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19604395_19605962_19606054_19612996
ES.7294.21	chr12	+	3896	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-59	757	multi-exon	FALSE	non_canonical	0	0	junction_1	12.4373429638327	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTATTTGGTTGTTGT	NA	False	NA	14	True	AATAAA	-15	NA	19338503	19355949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604_19355194_19355254
ES.7294.23	chr12	+	4812	8	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-51	1063	intron_retention	TRUE	non_canonical	0	0	junction_1	18.6241011288369	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	AATAAA	-1	NA	19338511	19614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338742_19540465_19540659_19547562_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19606054_19612996
ES.7294.24	chr12	+	3321	6	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-50	-11594	multi-exon	FALSE	non_canonical	0	0	junction_1	3.65513337649941	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGTCATCGCTCCT	NA	False	NA	NA	False	NA	NA	NA	19338512	19601501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547891_19547953_19575969_19576845_19577748_19577855_19599645
ES.7294.25	chr12	+	3628	6	Fusion	ENSMUSG00000114140.2_ENSMUSG00000113570.2	novel	580	3	NA	NA	-49	491	intron_retention	FALSE	non_canonical	0	0	junction_1	9.11262859991561	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTAGCCCCTCTTTT	NA	False	NA	NA	False	TATAAA	-2	NA	19338513	19613586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19454641_19454706_19575969_19576369_19577748_19577855_19603995_19606054_19612996
ES.7294.26	chr12	+	1094	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-49	7835	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9614813968157	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAATATGGTGAGTGA	NA	False	NA	NA	False	AAAAAG	-7	NA	19338513	19359100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19358608
ES.7294.27	chr12	+	3886	9	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-49	1064	multi-exon	FALSE	non_canonical	0	0	junction_1	17.7970327582999	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTGTGAGTTTCCTG	NA	False	NA	NA	False	AATAAA	-2	NA	19338513	19614159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547562_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19605037_19605962_19606054_19612996
ES.7294.28	chr12	+	4074	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-47	753	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	10	True	AATAAA	-11	NA	19338515	19355945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339793_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.29	chr12	+	3956	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-47	666	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGTCCTGGGGCCAA	NA	False	NA	-77	True	NA	NA	NA	19338515	19355858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339824_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.3	chr12	+	437	3	Intergenic	novelGene_5921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	28	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTGTTATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	19116396	19123893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19116514_19123371_19123499_19123700
ES.7294.30	chr12	+	4956	8	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-47	1063	intron_retention	FALSE	non_canonical	0	0	junction_1	7.28431359084684	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	AATAAA	-1	NA	19338515	19614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547415_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19606054_19612996
ES.7294.31	chr12	+	1271	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-44	8017	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9614813968157	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTAATATTATTTCTT	NA	False	NA	NA	False	NA	NA	NA	19338518	19359282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19358608
ES.7294.32	chr12	+	2713	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-40	754	multi-exon	FALSE	non_canonical	0	0	junction_1	12.4373429638327	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTTGT	NA	False	NA	11	True	AATAAA	-12	NA	19338522	19355946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604_19353551_19354772
ES.7294.33	chr12	+	961	5	Fusion	ENSMUSG00000113959.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-40	-1884	multi-exon	TRUE	non_canonical	0	0	junction_1	12.4373429638327	242	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTAATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	19338522	19353308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19352604_19352866_19353201
ES.7294.34	chr12	+	3830	8	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-37	-11597	multi-exon	FALSE	non_canonical	0	0	junction_1	20.6664472228859	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAGTGTCATCGCT	NA	False	NA	NA	False	NA	NA	NA	19338525	19601498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547562_19547690_19547891_19547953_19555394_19555820_19575969_19576845_19577748_19577855_19599672
ES.7294.35	chr12	+	2672	10	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-37	487	multi-exon	FALSE	non_canonical	0	0	junction_1	18.5618751713436	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAGGTCTAGCCCCTC	NA	False	NA	NA	False	AATATA	-13	NA	19338525	19613582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547562_19547690_19547891_19547953_19555394_19555888_19575969_19576369_19577748_19577855_19603995_19604395_19605962_19606054_19612996
ES.7294.36	chr12	+	2347	4	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-33	-876	multi-exon	FALSE	non_canonical	0	0	junction_1	12.2474487139159	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTATGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	19338529	19354316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350832_19351012_19351214_19351276_19352604
ES.7294.37	chr12	+	3957	9	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-33	1056	multi-exon	FALSE	non_canonical	0	0	junction_1	6.85565460040104	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	19338529	19614151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540671_19547479_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19605037_19605962_19606054_19612996
ES.7294.38	chr12	+	2578	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-32	-705	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19338530	19354487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.39	chr12	+	2703	6	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-32	-705	multi-exon	FALSE	non_canonical	0	0	junction_1	11.7234807118023	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19338530	19354487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339824_19339930_19340845_19340979_19350884_19351012_19351214_19351276_19352604
ES.7294.4	chr12	+	2599	4	Intergenic	novelGene_5922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGGGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	19116412	19127400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
ES.7294.40	chr12	+	2528	6	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-32	-888	multi-exon	FALSE	non_canonical	0	0	junction_1	11.7234807118023	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	19338530	19354304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19340845_19340979_19350884_19351012_19351214_19351276_19352604
ES.7294.41	chr12	+	4084	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-32	760	multi-exon	FALSE	non_canonical	0	0	junction_1	12.4373429638327	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATTTGGTTGTTGTTGT	NA	False	NA	17	True	AATAAA	-18	NA	19338530	19355952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339824_19339930_19350835_19351012_19351214_19351276_19352604
ES.7294.42	chr12	+	1148	4	Fusion	ENSMUSG00000114140.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	580	3	NA	NA	-31	-36562	multi-exon	FALSE	non_canonical	0	0	junction_1	4.78423336480244	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTTGCTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	19338531	19576533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19547891_19547953_19575969
ES.7294.43	chr12	+	3268	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-27	9906	multi-exon	FALSE	non_canonical	0	0	junction_1	10.9857862713599	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTGGGGTGGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	19338535	19361171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19351214_19351276_19357966_19358092_19358608
ES.7294.44	chr12	+	3488	7	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-25	-11597	multi-exon	FALSE	non_canonical	0	0	junction_1	5.08811250749125	368	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAGTGTCATCGCT	NA	False	NA	NA	False	NA	NA	NA	19338537	19601498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540671_19547479_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19599672
ES.7294.45	chr12	+	3233	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-18	9906	multi-exon	FALSE	canonical	0	0	junction_1	11.2333209693305	254	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTGGGGTGGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	19338544	19361171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339827_19339930_19350884_19351012_19351214_19351276_19358608
ES.7294.46	chr12	+	4205	8	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8_ENSMUSG00000113570.2	novel	580	3	NA	NA	-16	490	intron_retention	FALSE	non_canonical	0	0	junction_1	18.6241011288369	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTAGCCCCTCTTT	NA	False	NA	NA	False	TATAAA	-1	NA	19338546	19613585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338749_19540471_19540659_19547562_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19606054_19612996
ES.7294.47	chr12	+	4639	9	Fusion	ENSMUSG00000114140.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	580	3	NA	NA	-2	490	intron_retention	FALSE	non_canonical	0	0	junction_1	7.65567599889128	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTAGCCCCTCTTT	NA	False	NA	NA	False	TATAAA	-1	NA	19338560	19613585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19547891_19547953_19555394_19555726_19557266_19557392_19575969_19576845_19577748_19577855_19603995_19606054_19612996
ES.7294.48	chr12	+	2996	3	Genic_Genomic	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-1	9912	multi-exon	FALSE	non_canonical	0	0	junction_1	12	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGGCTCCATGCTTAA	NA	False	NA	NA	False	NA	NA	NA	19338561	19361177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19338925_19351211_19351276_19358608
ES.7294.5	chr12	+	3074	1	Intergenic	novelGene_5923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTTGTTGTTGTT	5662	False	NA	14	True	AATAAA	-19	NA	19124568	19127642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19124600_19127600
ES.7294.50	chr12	+	1392	6	Fusion	ENSMUSG00000114140.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	580	3	NA	NA	8	-36562	multi-exon	TRUE	non_canonical	0	0	junction_1	6.84105255059483	364	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTTGCTGGACATCCG	NA	False	NA	NA	False	NA	NA	NA	19338570	19576533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339824_19339930_19350884_19351012_19547891_19547999_19566520_19566656_19575969
ES.7294.51	chr12	+	883	3	Genic_Genomic	ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	9	7809	multi-exon	FALSE	non_canonical	0	0	junction_1	12	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	19338571	19359074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19338925_19351211_19351276_19358608
ES.7294.52	chr12	+	2327	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	28	-896	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACATACTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	19338590	19354296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.53	chr12	+	3927	6	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	28	753	multi-exon	FALSE	non_canonical	0	0	junction_1	11.3595774569303	249	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	10	True	AATAAA	-11	NA	19338590	19355945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339816_19339930_19350884_19351012_19351214_19351276_19352604_19354172_19354220
ES.7294.54	chr12	+	2477	5	Fusion	ENSMUSG00000113570.2_ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	50	-747	multi-exon	FALSE	non_canonical	0	0	junction_1	10.6418983268964	247	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTCTCTATAATCAATG	NA	False	NA	NA	False	NA	NA	NA	19338612	19354445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19339793_19339930_19350884_19351012_19351214_19351276_19352604
ES.7294.55	chr12	+	2468	8	Fusion	ENSMUSG00000114140.2_ENSMUSG00000113570.2_ENSMUSG00000073184.5	novel	580	3	NA	NA	142	487	multi-exon	FALSE	non_canonical	0	0	junction_1	6.56521445318632	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGAGGTCTAGCCCCTC	NA	False	NA	NA	False	AATATA	-13	NA	19338704	19613582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19338925_19350881_19351012_19547891_19547953_19575969_19576845_19577748_19577855_19603995_19604395_19605962_19606054_19612996
ES.7294.56	chr12	+	6271	1	Genic_Genomic	ENSMUSG00000073184.5	novel	NA	NA	NA	NA	-1616	-3797	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTACTTTGCTTATG	NA	False	NA	NA	False	NA	NA	NA	19341197	19347468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19341200_19347500
ES.7294.57	chr12	+	3584	5	Fusion	ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-53	753	multi-exon	FALSE	non_canonical	0	0	junction_4	11.4564392373896	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTGGTTG	NA	False	NA	10	True	AATAAA	-11	NA	19342760	19355945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19342877_19350884_19351012_19351214_19351276_19352604_19355194_19355254
ES.7294.58	chr12	+	3650	4	Fusion	ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-51	760	multi-exon	FALSE	canonical	2	15	junction_3	6.23609564462324	249	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATTTGGTTGTTGTTGT	NA	False	NA	17	True	AATAAA	-18	NA	19342762	19355952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19342877_19350884_19351012_19351214_19351276_19352604
ES.7294.59	chr12	+	2168	4	Fusion	ENSMUSG00000113959.2_ENSMUSG00000073184.5	novel	241	3	NA	NA	-34	-705	multi-exon	FALSE	canonical	2	15	junction_3	6.23609564462324	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	19342779	19354487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19342877_19350884_19351012_19351214_19351276_19352604
ES.7294.6	chr12	+	1832	1	Intergenic	novelGene_5924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTTGGTCATGAGAT	6189	False	NA	NA	False	NA	NA	NA	19125095	19126927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19125100_19126900
ES.7294.60	chr12	+	2836	4	NNC	ENSMUSG00000073184.5	novel	241	3	NA	NA	-23	9905	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_3	2.62466929133727	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGTGGGGTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	19342790	19361170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19342877_19350884_19351012_19351214_19351276_19358608
ES.7294.61	chr12	+	1681	2	Genic_Genomic	ENSMUSG00000113959.2	novel	3539	1	NA	NA	2548	751	multi-exon	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTCCTTGTATTTGGT	NA	False	NA	8	True	AATAAA	-9	NA	19354201	19355943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19355205_19355265
ES.7294.62	chr12	+	1690	2	Genic_Genomic	ENSMUSG00000113959.2	novel	3539	1	NA	NA	2560	755	multi-exon	FALSE	non_canonical	0	0	junction_1	0	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTATTTGGTTGTT	NA	False	NA	12	True	AATAAA	-13	NA	19354213	19355947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19355212_19355255
ES.7294.63	chr12	+	937	2	Genic_Genomic	ENSMUSG00000113959.2	novel	3539	1	NA	NA	2839	104499	multi-exon	TRUE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	19354492	19459691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19354518_19458779
ES.7294.64	chr12	+	2177	1	Intergenic	novelGene_5928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATATGGGACCCA	NA	False	NA	NA	False	NA	NA	NA	19358631	19360808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19358600_19360800
ES.7294.65	chr12	+	3067	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-54	18281	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTCACAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	19437755	19458568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
ES.7294.66	chr12	+	4206	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-20	19405	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.2740233382816	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19437789	19459692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454266_19454443_19454644_19454706_19456148
ES.7294.67	chr12	+	4159	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-13	19414	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTGTTGTTGCAGC	NA	False	NA	NA	False	NA	NA	NA	19437796	19459701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
ES.7294.68	chr12	+	2891	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-10	18149	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19437799	19458436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
ES.7294.69	chr12	+	3200	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-8	18460	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	5.55777733351102	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTCTCCATTATTTT	NA	False	NA	NA	False	NA	NA	NA	19437801	19458747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454315_19454443_19454644_19454706_19456148
ES.7294.7	chr12	+	2049	4	Genic_Genomic	ENSMUSG00000116705.2	novel	393	1	NA	NA	-333124	951	multi-exon	TRUE	non_canonical	0	0	junction_1	0	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	6318	False	NA	NA	False	NA	NA	NA	19125224	19459692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19125501_19126119_19126206_19457483_19457946_19458467
ES.7294.70	chr12	+	2748	3	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	6	18149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19437815	19458436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454644_19454706_19456148
ES.7294.71	chr12	+	4590	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	11	19405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5854314646552	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19437820	19459692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19453851_19454443_19454644_19454706_19456148
ES.7294.72	chr12	+	2878	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	-3	18149	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.2740233382816	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19437861	19458436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438215_19454266_19454443_19454644_19454706_19456148
ES.7294.73	chr12	+	2777	4	NNC	ENSMUSG00000093908.3	novel	2016	2	NA	NA	56	18149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5854314646552	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACTGGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	19437920	19458436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_19438222_19454315_19454443_19454644_19454706_19456148
ES.7294.74	chr12	+	3546	1	FSM	ENSMUSG00000116705.2	ENSMUST00000232472.2	393	1	-2202	-951	-2202	951	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19456146	19459692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_19456100_19459700
ES.7294.75	chr12	+	6689	4	Genic_Genomic	ENSMUSG00000116705.2	novel	393	1	NA	NA	-1125	69459	multi-exon	TRUE	non_canonical	0	0	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	19457223	19528200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19457396_19457480_19457624_19457707_19462258_19526376
ES.7294.76	chr12	+	3615	4	Genic_Genomic	ENSMUSG00000059229.8	novel	1983	1	NA	NA	-111	9963	multi-exon	FALSE	canonical	3	13	junction_2	22.1710521977545	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTTGGTCATGAGAT	NA	False	NA	NA	False	NA	NA	NA	19540197	19552254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19540659_19547562_19547690_19547891_19547953_19549288
ES.7294.77	chr12	+	3443	6	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8	novel	580	3	NA	NA	-71	-11595	multi-exon	FALSE	canonical	0	0	junction_5	22.012723593413	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTGTCATCGCTCC	NA	False	NA	NA	False	NA	NA	NA	19540237	19601500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19540659_19547562_19547690_19547891_19547953_19575969_19576845_19577748_19577855_19599647
ES.7294.78	chr12	+	4265	4	Genic_Genomic	ENSMUSG00000059229.8	novel	1983	1	NA	NA	-65	10659	multi-exon	FALSE	canonical	3	13	junction_2	22.1710521977545	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	5	True	NA	NA	NA	19540243	19552950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19540659_19547562_19547690_19547891_19547953_19549288
ES.7294.79	chr12	+	3236	9	Fusion	ENSMUSG00000114140.2_ENSMUSG00000059229.8	novel	580	3	NA	NA	-58	494	multi-exon	FALSE	canonical	0	0	junction_1	6.68837611083587	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTAGCCCCTCTTTTTAT	NA	False	NA	NA	False	TATAAA	-5	NA	19540250	19613589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19540659_19575969_19576083_19576166_19576369_19577748_19577855_19579315_19579424_19600799_19601374_19603995_19605037_19605962_19606054_19612996
ES.7294.8	chr12	+	3836	1	FSM	ENSMUSG00000113205.2	ENSMUST00000222931.2	127	1	-217	-3492	-217	3492	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATTAAAATTTAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	19225886	19229722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_19225900_19229700
ES.7294.80	chr12	+	4375	3	Genic_Genomic	ENSMUSG00000059229.8	novel	1983	1	NA	NA	43	9541	multi-exon	FALSE	canonical	3	13	junction_2	24	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	19540351	19551832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_19540659_19547562_19547690_19547891
ES.7294.81	chr12	+	470	1	Intergenic	novelGene_5932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTATTGTCTCTATAAT	NA	False	NA	NA	False	NA	NA	NA	19551498	19551968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19551500_19552000
ES.7294.82	chr12	+	6052	1	Intergenic	novelGene_5933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAAGAGTTCTTACTGT	NA	False	NA	NA	False	NA	NA	NA	19551953	19558005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19552000_19558000
ES.7294.83	chr12	+	178	1	Intergenic	novelGene_5934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATTTGAAA	NA	False	NA	NA	False	NA	NA	NA	19584783	19584961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19584800_19585000
ES.7294.84	chr12	+	8770	4	Fusion	ENSMUSG00000113300.2_ENSMUSG00000114158.2	novel	470	2	NA	NA	-9824	0	multi-exon	FALSE	canonical	0	0	junction_1	8.64098759787715	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	AATAAA	-1	NA	19594255	19614158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_19601374_19603995_19604395_19605962_19606054_19612996
ES.7294.9	chr12	+	2635	4	Intergenic	novelGene_5925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	2.86744175568088	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTTTTGT	NA	False	NA	NA	False	AATAAA	-41	NA	19236555	19250659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19236734_19246674_19246802_19247002_19247064_19248390
ES.7295.1	chr12	-	208	1	Intergenic	novelGene_5926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAACCATGATGAGTAA	NA	False	NA	NA	False	NA	NA	NA	19239401	19239193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19239200_19239400
ES.7296.1	chr12	-	9741	1	FSM	ENSMUSG00000113408.2	ENSMUST00000222201.2	109	1	-4630	-5002	-4630	5002	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATAGGACTGCTTTCA	NA	False	NA	NA	False	NA	NA	NA	19350508	19340767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_19340800_19350500
ES.7297.1	chr12	-	176	1	Intergenic	novelGene_5927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19356733	19356557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19356600_19356700
ES.7298.1	chr12	-	2486	1	Intergenic	novelGene_5929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTCGTGTTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	19405544	19403058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19403100_19405500
ES.7299.1	chr12	-	177	1	Intergenic	novelGene_5930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAGCTATATAG	NA	False	NA	NA	False	NA	NA	NA	19436514	19436337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19436300_19436500
ES.73.1	chr1	-	150	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTTCTAGTGTATT	NA	False	NA	NA	False	NA	NA	NA	9885301	9885151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9885200_9885300
ES.730.1	chr1	+	5468	15	Antisense	novelGene_ENSMUSG00000055322.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCCTCTCCCTCAGC	NA	False	NA	NA	False	NA	NA	NA	73978555	74037223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_73980213_73981068_73981265_73991578_73993110_74020072_74020189_74021390_74021458_74024177_74024308_74024861_74024938_74025033_74025097_74025423_74025535_74029469_74029556_74030835_74030898_74031257_74031384_74032323_74032376_74034362_74034545_74036210
ES.730.2	chr1	+	3269	20	Antisense	novelGene_ENSMUSG00000055322.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCGACCTCTCGGCCC	NA	False	NA	NA	False	NA	NA	NA	73981160	74163672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_73981265_73991578_73993110_74020072_74020189_74021390_74021458_74024177_74024308_74024861_74024938_74025030_74025090_74025417_74025534_74029470_74029556_74030835_74030898_74031257_74031384_74032323_74032377_74034362_74034545_74036210_74036264_74041446_74041499_74042677_74042718_74055303_74055348_74107769_74107808_74118359_74118475_74163452
ES.730.4	chr1	+	3147	12	Antisense	novelGene_ENSMUSG00000055322.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTCATAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73992115	74037191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_73993110_74020072_74020189_74021390_74021458_74024177_74024308_74024861_74025097_74025422_74025535_74029469_74029556_74030835_74030898_74031257_74031384_74032323_74032377_74034362_74034545_74036207
ES.730.5	chr1	+	1705	7	Antisense	novelGene_ENSMUSG00000055322.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74025324	74037196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_74025535_74029469_74029556_74030835_74030898_74031257_74031384_74032323_74032377_74034362_74034545_74036210
ES.730.6	chr1	+	222	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	74103574	74103796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74103600_74103800
ES.7300.1	chr12	-	157	1	Intergenic	novelGene_5931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	19455011	19454854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19454900_19455000
ES.7301.1	chr12	-	4428	2	Intergenic	novelGene_5935	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAAGAATATGGC	NA	False	NA	NA	False	NA	NA	NA	19912901	19907651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19908955_19909776
ES.7301.2	chr12	-	1780	1	Intergenic	novelGene_5936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	19913219	19911439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_19911400_19913200
ES.7301.3	chr12	-	6224	4	Genic_Genomic	ENSMUSG00000113411.2_ENSMUSG00000113077.2	novel	370	1	NA	NA	-195	3484	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCACTACTGATCAGT	NA	False	NA	NA	False	NA	NA	NA	19932516	19911642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_19917357_19918884_19918946_19919142_19919270_19932194
ES.7301.4	chr12	-	5974	4	Genic_Genomic	ENSMUSG00000113411.2	novel	370	1	NA	NA	-9824	3470	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTATTGGAATTAAGT	NA	False	NA	NA	False	NA	NA	NA	19925320	19911656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_19917357_19918884_19918946_19919142_19919270_19925234
ES.7302.1	chr12	+	5169	1	Intergenic	novelGene_5937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	19945961	19951130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_19946000_19951100
ES.7303.1	chr12	+	4087	5	Genic_Genomic	ENSMUSG00000095470.2	novel	336	1	NA	NA	-9	24542	multi-exon	TRUE	non_canonical	0	0	junction_1	2.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20004496	20029383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20004632_20023640_20023768_20023969_20024031_20025367_20025811_20026062
ES.7303.10	chr12	+	5874	3	Intergenic	novelGene_5942	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACATACTGGAG	NA	False	NA	NA	False	NA	NA	NA	20129375	20136787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20132570_20132771_20132833_20134168
ES.7303.11	chr12	+	2682	6	NNC	ENSMUSG00000113039.2	novel	580	3	NA	NA	-28393	1051	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	2.92574776766556	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	20132771	20195897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_20132833_20161140_20162016_20162919_20163026_20189136_20189536_20191102_20191194_20194747
ES.7303.12	chr12	+	4105	4	NNC	ENSMUSG00000113039.2	novel	580	3	NA	NA	59	1051	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.05480466765633	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	20161223	20195897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_20162016_20162919_20163026_20189136_20191194_20194747
ES.7303.13	chr12	+	203	1	Intergenic	novelGene_5943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAACAAAAAAGATAG	NA	False	NA	NA	False	NA	NA	NA	20169961	20170164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20170000_20170200
ES.7303.14	chr12	+	2006	1	Intergenic	novelGene_5944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTAGTGTAGTCGCT	NA	False	NA	NA	False	NA	NA	NA	20181586	20183592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20181600_20183600
ES.7303.15	chr12	+	4423	1	Intergenic	novelGene_5945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTCATCGCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	20182213	20186636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20182200_20186600
ES.7303.16	chr12	+	3280	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-355	48863	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCTCCATTATTTTTAA	NA	False	NA	7	True	NA	NA	NA	20246561	20295918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
ES.7303.17	chr12	+	3273	3	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-355	767	intron_retention	FALSE	canonical	2	8	junction_1	2.5	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAGCACCCTGTTCATGG	NA	False	NA	NA	False	AATAAA	-28	NA	20246561	20328796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015_20326942_20327931
ES.7303.18	chr12	+	2843	5	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-341	48860	multi-exon	TRUE	non_canonical	0	0	junction_4	20.7665596572952	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTCTCCATTATTTT	NA	False	NA	4	True	NA	NA	NA	20246575	20295915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20293683_20294102
ES.7303.19	chr12	+	1776	4	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-313	734	intron_retention	FALSE	canonical	1	2	junction_2	4.49691252107735	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20246603	20328763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015_20325414_20326835_20326942_20327931
ES.7303.2	chr12	+	2276	4	Intergenic	novelGene_5938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	2.35702260395516	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	20023682	20027749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20023768_20023969_20024031_20025367_20025811_20026062
ES.7303.20	chr12	+	2948	3	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-302	495	intron_retention	FALSE	canonical	2	8	junction_1	2.5	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTTCAGCCCCTGTAT	NA	False	NA	NA	False	TATAAA	-4	NA	20246614	20328524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015_20326942_20327931
ES.7303.21	chr12	+	1790	4	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-301	734	intron_retention	FALSE	canonical	0	0	junction_3	3.39934634239519	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20246615	20328763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015_20325414_20326835_20326968_20327931
ES.7303.22	chr12	+	3098	3	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-301	48862	multi-exon	FALSE	canonical	3	14	junction_1	12.5	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246615	20295917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291916_20291978_20293308
ES.7303.23	chr12	+	3384	5	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-301	744	intron_retention	FALSE	canonical	2	5	junction_3	20.5836707124847	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	NA	False	NA	NA	False	AATAAA	-5	NA	20246615	20328773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20291589_20291717_20291916_20291978_20325015_20326942_20327931
ES.7303.24	chr12	+	1447	6	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-300	48862	multi-exon	TRUE	non_canonical	0	0	junction_4	22.9032748750042	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246616	20295917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20293851_20294270_20294300_20295656
ES.7303.25	chr12	+	2259	4	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-300	734	intron_retention	FALSE	canonical	0	0	junction_2	5.35412613473634	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20246616	20328763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015_20325910_20326835_20326942_20327931
ES.7303.26	chr12	+	2369	5	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-300	48862	multi-exon	TRUE	non_canonical	0	0	junction_4	20.7665596572952	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246616	20295917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20294775_20295629
ES.7303.27	chr12	+	967	2	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-300	-2474	intron_retention	FALSE	canonical	2	8	junction_1	0	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCAAGCATCTATCG	NA	False	NA	NA	False	ATTAAA	-30	NA	20246616	20325555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20325015
ES.7303.28	chr12	+	1404	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-298	47044	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAATCAATGTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	20246618	20294099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
ES.7303.29	chr12	+	2102	5	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-286	48862	multi-exon	FALSE	non_canonical	0	0	junction_4	20.7665596572952	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	6	True	NA	NA	NA	20246630	20295917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20294410_20295517
ES.7303.3	chr12	+	1339	3	Intergenic	novelGene_5939	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACGTACT	NA	False	NA	NA	False	NA	NA	NA	20025472	20027735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20025501_20025668_20026049_20026804
ES.7303.30	chr12	+	7076	1	FSM	ENSMUSG00000113964.2	ENSMUST00000220587.2	139	1	-272	-6665	-272	6665	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGATTTTGCCAGT	NA	False	NA	NA	False	NA	NA	NA	20246644	20253720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_20246600_20253700
ES.7303.31	chr12	+	2215	6	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-271	734	intron_retention	FALSE	canonical	0	0	junction_4	21.6018517724754	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20246645	20328763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20247044_20291589_20291717_20291916_20291978_20325015_20325414_20326542_20326942_20327931
ES.7303.32	chr12	+	3028	5	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-270	48863	multi-exon	TRUE	non_canonical	0	0	junction_4	20.7665596572952	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCTCCATTATTTTTAA	NA	False	NA	7	True	NA	NA	NA	20246646	20295918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20293669_20293835
ES.7303.33	chr12	+	4088	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-270	49756	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	20246646	20296811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
ES.7303.34	chr12	+	2784	4	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	-270	48452	multi-exon	FALSE	canonical	3	38	junction_1	8.73053390247253	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	20246646	20295507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308
ES.7303.35	chr12	+	1262	5	Genic_Genomic	ENSMUSG00000113964.2	novel	139	1	NA	NA	49	48859	multi-exon	TRUE	non_canonical	0	0	junction_4	20.7665596572952	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTCTCCATTATTT	NA	False	NA	3	True	NA	NA	NA	20246965	20295914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20247044_20291589_20291717_20291916_20291978_20293308_20294042_20295651
ES.7303.36	chr12	+	4137	1	Intergenic	novelGene_5946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGGTAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	20270485	20274622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20270500_20274600
ES.7303.37	chr12	+	206	1	Intergenic	novelGene_5947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	20271102	20271308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20271100_20271300
ES.7303.38	chr12	+	2912	4	Antisense	novelGene_ENSMUSG00000113443.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	23.7907545067406	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGTCTCCATTATTTTT	NA	False	NA	5	True	NA	NA	NA	20274180	20295916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_20274297_20291589_20291717_20291916_20291978_20293308
ES.7303.39	chr12	+	6100	1	Antisense	novelGene_ENSMUSG00000113443.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTACTTGGCTTATGC	NA	False	NA	NA	False	NA	NA	NA	20281831	20287931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_20281800_20287900
ES.7303.4	chr12	+	974	4	Genic_Genomic	ENSMUSG00000116715.2	novel	883	3	NA	NA	-342621	556	multi-exon	TRUE	non_canonical	0	0	junction_1	0	346	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCTCTATAATCAATGT	NA	False	NA	-33	True	NA	NA	NA	20026984	20373352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20027200_20135915_20136138_20371710_20372158_20373262
ES.7303.40	chr12	+	2969	1	Intergenic	novelGene_5948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAAGAAGTATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	20345841	20348810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20345800_20348800
ES.7303.41	chr12	+	2530	4	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-342	414	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	20362173	20373210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
ES.7303.42	chr12	+	2709	4	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-337	598	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCTCCATTATTTTTAA	NA	False	NA	9	True	NA	NA	NA	20362178	20373394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
ES.7303.43	chr12	+	2327	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-307	414	multi-exon	FALSE	non_canonical	0	0	junction_4	22.2977016752848	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	20362208	20373210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20372168_20372335
ES.7303.44	chr12	+	3957	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-307	2044	multi-exon	FALSE	non_canonical	0	0	junction_4	22.2977016752848	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20362208	20374840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20372168_20372335
ES.7303.45	chr12	+	5609	6	Genic_Genomic	ENSMUSG00000116558.2	novel	126	1	NA	NA	-307	557757	multi-exon	TRUE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	20362208	20920398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20362817_20665602_20666638_20794454_20794626_20807057_20807182_20916661_20920097_20920162
ES.7303.46	chr12	+	4069	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-307	2043	multi-exon	FALSE	non_canonical	0	0	junction_4	22.2977016752848	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	20362208	20374839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20374102_20374156
ES.7303.47	chr12	+	4346	7	Genic_Genomic	ENSMUSG00000116558.2	novel	126	1	NA	NA	-307	557757	multi-exon	FALSE	non_canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	20362208	20920398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20362817_20665602_20666638_20794454_20794626_20807057_20807182_20916661_20917359_20918621_20920097_20920162
ES.7303.48	chr12	+	4124	4	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-306	2044	multi-exon	FALSE	canonical	2	4	junction_2	22.69116323349	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	20362209	20374840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336
ES.7303.49	chr12	+	3901	6	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-306	2043	multi-exon	FALSE	non_canonical	0	0	junction_4	21.2377023239333	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	20362209	20374839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20372168_20372335_20374104_20374157
ES.7303.5	chr12	+	4674	2	Intergenic	novelGene_5940	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGCGAGTGATATCT	NA	False	NA	NA	False	NA	NA	NA	20027645	20032721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20029780_20030181
ES.7303.50	chr12	+	2500	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-297	597	multi-exon	FALSE	non_canonical	0	0	junction_4	22.2977016752848	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	8	True	NA	NA	NA	20362218	20373393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20372168_20372335
ES.7303.51	chr12	+	4065	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-292	2043	multi-exon	FALSE	non_canonical	0	0	junction_4	22.2977016752848	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	20362223	20374839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20374114_20374157
ES.7303.52	chr12	+	1208	6	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-278	597	multi-exon	TRUE	non_canonical	0	0	junction_4	21.2377023239333	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	8	True	NA	NA	NA	20362237	20373393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20371774_20372025_20372043_20373231
ES.7303.53	chr12	+	2580	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-261	403	multi-exon	FALSE	canonical	0	0	junction_1	4.84767985741633	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAACGTACTGGA	NA	False	NA	NA	False	NA	NA	NA	20362254	20373199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20363510_20363653_20369605_20369733_20369934_20369996_20371336
ES.7303.54	chr12	+	1024	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-261	596	multi-exon	TRUE	non_canonical	0	0	junction_4	22.2977016752848	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTCTCCATTATTTTT	NA	False	NA	7	True	NA	NA	NA	20362254	20373392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20371700_20373306
ES.7303.55	chr12	+	1917	5	Fusion	ENSMUSG00000116715.2_ENSMUSG00000116558.2	novel	883	3	NA	NA	-230	597	multi-exon	TRUE	non_canonical	0	0	junction_4	22.2977016752848	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	8	True	NA	NA	NA	20362285	20373393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20362642_20369605_20369733_20369934_20369996_20371336_20372623_20373306
ES.7303.56	chr12	+	1721	1	Intergenic	novelGene_5949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTTGTCATGG	NA	False	NA	NA	False	NA	NA	NA	20363847	20365568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20363800_20365600
ES.7303.57	chr12	+	5554	4	NNC	ENSMUSG00000116715.2	novel	883	3	NA	NA	-3675	400	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	5.43650214343336	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGTAAAAAAAAAACGTACT	NA	False	NA	NA	False	NA	NA	NA	20365930	20373196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_20369733_20369934_20369996_20371336_20372176_20372344
ES.7303.58	chr12	+	3309	2	Intergenic	novelGene_5950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGCGAGTGATATCT	NA	False	NA	NA	False	NA	NA	NA	20374443	20377800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20376563_20376610
ES.7303.59	chr12	+	1925	2	Intergenic	novelGene_5951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGCGAGTGATATCT	NA	False	NA	NA	False	NA	NA	NA	20375829	20377800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20376565_20376610
ES.7303.6	chr12	+	771	1	Intergenic	novelGene_5941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGGGTGGCTCCATG	NA	False	NA	NA	False	NA	NA	NA	20034052	20034823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20034100_20034800
ES.7303.60	chr12	+	1574	1	Intergenic	novelGene_5952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATGGCGAGTGATATCT	NA	False	NA	NA	False	NA	NA	NA	20376226	20377800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20376200_20377800
ES.7303.61	chr12	+	175	1	Intergenic	novelGene_5953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGGTTCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	20413027	20413202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20413000_20413200
ES.7303.62	chr12	+	1234	4	Intergenic	novelGene_5954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGACTGTCTTAGCTAC	5428	False	NA	NA	False	NA	NA	NA	20423108	20428842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20423940_20426588_20426686_20427301_20427382_20428616
ES.7303.63	chr12	+	4019	2	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-348	2886	multi-exon	FALSE	canonical	3	27	junction_1	0	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTGTCACAAGCACC	NA	False	NA	NA	False	AATAAA	-18	NA	20465589	20512098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20508554
ES.7303.64	chr12	+	3040	1	FSM	ENSMUSG00000113749.2	ENSMUST00000220565.2	721	1	-2096	-223	-2096	223	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCCCATGTTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	20465626	20468666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_20465600_20468700
ES.7303.65	chr12	+	838	5	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-300	667	multi-exon	FALSE	canonical	0	0	junction_4	56.6347949585765	128	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAAGTAAAGTAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	20465637	20509879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554_20508711_20509812
ES.7303.66	chr12	+	835	4	Genic_Genomic	ENSMUSG00000112951.3	novel	139	1	NA	NA	-300	45989	multi-exon	FALSE	canonical	0	0	junction_1	0	132	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATCAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	20465637	20512065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20466065_20511241_20511272_20511440_20511718_20511964
ES.7303.67	chr12	+	1447	3	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-300	2853	multi-exon	FALSE	canonical	0	0	junction_2	13.5	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATCAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	20465637	20512065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20508554_20508711_20511201
ES.7303.68	chr12	+	4142	4	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-300	2869	multi-exon	FALSE	canonical	3	21	junction_3	53.2228021309163	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20465637	20512081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554
ES.7303.69	chr12	+	1130	4	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-284	-127	multi-exon	FALSE	canonical	3	21	junction_3	53.2228021309163	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTAACGATAAAAGCCAA	NA	False	NA	NA	False	ACTAAA	-20	NA	20465653	20509085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20508554
ES.7303.7	chr12	+	1229	4	Fusion	ENSMUSG00000116537.2_ENSMUSG00000116606.2_ENSMUSG00000113901.2	novel	654	4	NA	NA	-274	-17	multi-exon	FALSE	canonical	0	0	junction_2	16.739839372653	408	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	TATAAA	-15	NA	20121608	20509195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20122009_20132442_20132570_20483635_20483697_20508554
ES.7303.70	chr12	+	1187	5	Fusion	ENSMUSG00000112951.3_ENSMUSG00000116606.2	novel	654	4	NA	NA	-284	1203	multi-exon	FALSE	non_canonical	0	0	junction_4	53.8725347463807	124	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	20465653	20486621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20483306_20483434_20483635_20483697_20485031_20485271_20486272
ES.7303.71	chr12	+	3372	2	Genic_Genomic	ENSMUSG00000112951.3_ENSMUSG00000113749.2	novel	721	1	NA	NA	-277	2154	multi-exon	FALSE	canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCATGAGTCTCTTATT	NA	False	NA	NA	False	AATAAA	-45	NA	20465660	20470597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20466065_20467629
ES.7303.72	chr12	+	1042	2	Fusion	ENSMUSG00000116537.2_ENSMUSG00000112951.3	novel	739	2	NA	NA	-271	-14	multi-exon	FALSE	canonical	3	27	junction_1	0	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	TATAAA	-18	NA	20465666	20509198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20466065_20508554
ES.7303.73	chr12	+	1554	2	Genic_Genomic	ENSMUSG00000112951.3_ENSMUSG00000113749.2	novel	721	1	NA	NA	-257	352	multi-exon	FALSE	canonical	3	7	junction_1	0	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTTAGTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	20465680	20468795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20466065_20467625
ES.7303.74	chr12	+	5394	1	Intergenic	novelGene_5955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCCAAAACTAATGCCCA	NA	False	NA	NA	False	AAAACA	-4	NA	20468876	20474270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20468900_20474300
ES.7303.75	chr12	+	3771	1	Genic_Genomic	ENSMUSG00000116606.2	novel	NA	NA	NA	NA	-1202	-5936	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTACTTGGCTTATGT	NA	False	NA	NA	False	NA	NA	NA	20475711	20479482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20475700_20479500
ES.7303.76	chr12	+	2714	1	Genic_Genomic	ENSMUSG00000116537.2	novel	NA	NA	NA	NA	4845	22	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACAAACCTCTAATGAG	NA	False	NA	NA	False	NA	NA	NA	20506520	20509234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20506500_20509200
ES.7303.77	chr12	+	4433	1	Genic_Genomic	ENSMUSG00000116537.2	novel	NA	NA	NA	NA	5957	2853	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATCAAATAAACCAA	NA	False	NA	NA	False	NA	NA	NA	20507632	20512065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20507600_20512100
ES.7303.78	chr12	+	2144	6	Fusion	ENSMUSG00000116635.2_ENSMUSG00000116883.2	novel	1546	5	NA	NA	-340	482	intron_retention	FALSE	canonical	1	2	junction_3	3.77359245282264	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTGAGTTTCTTGT	NA	False	NA	NA	False	AATAAA	-3	NA	20665003	20720677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20665431_20683109_20683237_20683438_20683500_20714495_20715078_20716280_20716387_20719836
ES.7303.79	chr12	+	4098	2	NNC	ENSMUSG00000113157.3	novel	725	2	NA	NA	34	-8504	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTCCTGTGTGCATCT	NA	False	NA	NA	False	NA	NA	NA	20665048	20706300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_20665431_20702584
ES.7303.8	chr12	+	3217	4	Genic_Genomic	ENSMUSG00000113901.2	novel	130	1	NA	NA	-274	14785	multi-exon	FALSE	canonical	1	2	junction_3	16.539514973407	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAACTCTA	NA	False	NA	NA	False	NA	NA	NA	20121608	20136797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_20122009_20132442_20132570_20132771_20132833_20134168
ES.7303.80	chr12	+	2089	5	Fusion	ENSMUSG00000116635.2_ENSMUSG00000116883.2	novel	573	4	NA	NA	-256	474	intron_retention	FALSE	canonical	0	0	junction_1	2.27760839478607	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAATGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	20665087	20720669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_20665431_20711127_20711353_20714495_20715078_20716280_20716387_20719836
ES.7303.81	chr12	+	1183	1	NIC	ENSMUSG00000116883.2	novel	1546	5	NA	NA	21421	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	2	True	NA	NA	NA	20686764	20687947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_20686800_20687900
ES.7303.82	chr12	+	3426	1	Intergenic	novelGene_5959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20688866	20692292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20688900_20692300
ES.7303.83	chr12	+	108	1	Intergenic	novelGene_5960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTAGTGTCATTGCT	NA	False	NA	1	True	NA	NA	NA	20708710	20708818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20708700_20708800
ES.7303.84	chr12	+	157	1	Intergenic	novelGene_5962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	20776262	20776419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_20776300_20776400
ES.7303.9	chr12	+	3878	6	NNC	ENSMUSG00000113039.2	novel	580	3	NA	NA	-36995	493	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.53431361950185	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTAGCCCCTCTTTTTA	NA	False	NA	NA	False	TATAAA	-4	NA	20124169	20195339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_20124267_20132771_20132874_20161091_20162016_20162919_20163026_20189136_20191194_20194747
ES.7304.1	chr12	-	177	1	Intergenic	novelGene_5956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGCTGTATAG	NA	False	NA	NA	False	NA	NA	NA	20663730	20663553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20663600_20663700
ES.7305.1	chr12	-	155	1	Intergenic	novelGene_5957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	20667981	20667826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20667800_20668000
ES.7306.1	chr12	-	3188	2	Antisense	novelGene_ENSMUSG00000116883.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGAAGATTGAACAAATAC	NA	False	NA	NA	False	AAAAAG	-4	NA	20682733	20678085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_20679233_20680692
ES.7307.1	chr12	-	2264	1	Intergenic	novelGene_5958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACAGATGTCTTCAGGC	NA	False	NA	NA	False	ATTAAA	-43	NA	20690758	20688494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20688500_20690800
ES.7308.1	chr12	-	6395	2	Intergenic	novelGene_5961	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGTCTCGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	20964592	20767045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20767526_20958677
ES.7308.10	chr12	-	4504	1	Intergenic	novelGene_5964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGCATTAAACGAGCT	NA	False	NA	NA	False	NA	NA	NA	20863116	20858612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20858600_20863100
ES.7308.11	chr12	-	4419	1	FSM	ENSMUSG00000091071.3	ENSMUST00000110971.3	1471	1	-42	-2906	-42	2906	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTCTCTTATTCTGTT	NA	False	NA	0	True	ATTAAA	-24	NA	20865770	20861351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_20861400_20865800
ES.7308.12	chr12	-	4233	2	Genic_Genomic	ENSMUSG00000099759.2	novel	1735	2	NA	NA	-13	-6972	multi-exon	FALSE	canonical	3	19	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAGTCTCTTATTCTG	NA	False	NA	-2	True	ATTAAA	-22	NA	20865793	20861353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_20865068_20865274
ES.7308.13	chr12	-	4134	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	10	-6976	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCATGAGTCTCTTAT	NA	False	NA	-6	True	AATAAA	-44	NA	20865770	20861357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20865068_20865346
ES.7308.14	chr12	-	2135	3	Genic_Genomic	ENSMUSG00000091071.3	novel	1471	1	NA	NA	-33	2873	multi-exon	FALSE	non_canonical	0	0	junction_1	9.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATTAAAATTTAACTTT	NA	False	NA	-33	True	AATAAA	-17	NA	20865761	20861384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_20861596_20863630_20865068_20865274
ES.7308.15	chr12	-	1681	4	NNC	ENSMUSG00000085642.9	novel	2004	4	NA	NA	-86	739	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	20971140	20923386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20924221_20925110_20925262_20926698_20927097_20970842
ES.7308.16	chr12	-	3242	3	NNC	ENSMUSG00000085642.9	novel	2004	4	NA	NA	-1	739	intron_retention	FALSE	canonical	0	0	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	20971264	20923386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20924221_20925110_20927097_20970842
ES.7308.17	chr12	-	1898	2	FSM	ENSMUSG00000085642.9	ENSMUST00000143905.2	881	2	-230	-787	-21	0	multi-exon	FALSE	canonical	1	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTTTCATTTTCTA	NA	False	NA	NA	False	NA	NA	NA	20971284	20925640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_20927097_20970842
ES.7308.18	chr12	-	902	2	FSM	ENSMUSG00000085642.9	ENSMUST00000143905.2	881	2	-158	137	17	-137	multi-exon	FALSE	canonical	1	3	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATGATAAAAGCCAAGC	NA	False	NA	NA	False	ATTAAA	-22	NA	20971212	20926564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_20927097_20970842
ES.7308.19	chr12	-	1373	8	NNC	ENSMUSG00000069755.6	novel	928	6	NA	NA	2	-707	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.66496544373966	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTTTCATTAAGTTA	NA	False	NA	NA	False	NA	NA	NA	20971261	20949281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20949292_20950389_20950936_20952270_20952332_20952533_20952661_20964435_20964519_20964759_20964843_20965748_20965793_20970842
ES.7308.2	chr12	-	867	3	Intergenic	novelGene_5963	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTGAGTTGTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	20831542	20822115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_20822270_20830037_20830128_20830919
ES.7308.20	chr12	-	2532	2	NNC	ENSMUSG00000085642.9	novel	2004	4	NA	NA	-1	-41671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGCATTAAATGAGCT	NA	False	NA	NA	False	NA	NA	NA	20971230	20968421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20970566_20970842
ES.7308.3	chr12	-	3119	4	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	23	22755	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.4142135623731	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCTGGGGTCACTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	20865757	20831626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20834387_20848304_20848394_20865346_20865543_20865683
ES.7308.4	chr12	-	668	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	23	6245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTATAAAGTCATTTTCA	NA	False	NA	NA	False	NA	NA	NA	20865757	20848136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20848394_20865346
ES.7308.5	chr12	-	11373	1	FSM	ENSMUSG00000091071.3	ENSMUST00000110971.3	1471	1	-29	-9873	-29	9873	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAACCTTCTCACTTTAT	NA	False	NA	NA	False	NA	NA	NA	20865757	20854384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_20854400_20865800
ES.7308.6	chr12	-	1707	2	FSM	ENSMUSG00000099759.2	ENSMUST00000189625.2	1735	2	20	8	20	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGCTAAACCTTCTCAC	NA	False	NA	NA	False	NA	NA	NA	20865760	20854389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_20855683_20865346
ES.7308.7	chr12	-	3741	3	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	6197	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	20859583	20854413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20855683_20856892_20856951_20857169
ES.7308.8	chr12	-	2779	4	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	9	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	20865771	20854413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_20855683_20856892_20856951_20857169_20858125_20865274
ES.7308.9	chr12	-	3272	1	NIC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	7005	-1122	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTCTTGGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	20858775	20855503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_20855500_20858800
ES.7309.1	chr12	+	1228	6	Fusion	ENSMUSG00000092229.4_ENSMUSG00000116627.2	novel	1230	4	NA	NA	-79	702	multi-exon	FALSE	canonical	1	1	junction_3	34.0411515668903	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	AATAAA	-3	NA	21040457	21099030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21040874_21062987_21063115_21063316_21063378_21092935_21093335_21094725_21094832_21098911
ES.7309.10	chr12	+	3724	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	5	-21988	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.3938265723579	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGTATTTTGTTG	NA	False	NA	-1	True	AATAAA	-11	NA	21040541	21068441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066066_21066231_21067983_21068023
ES.7309.11	chr12	+	1362	7	Fusion	ENSMUSG00000092229.4_ENSMUSG00000116627.2	novel	1230	4	NA	NA	23	702	multi-exon	FALSE	canonical	0	0	junction_3	32.1334024895521	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	AATAAA	-3	NA	21040559	21099030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21040874_21062987_21063115_21063316_21063378_21089724_21089961_21092935_21093335_21094725_21094832_21098911
ES.7309.12	chr12	+	3700	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	26	-21988	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	35.2873915159509	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGTATTTTGTTG	NA	False	NA	-1	True	AATAAA	-11	NA	21040562	21068441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066077_21066244_21067973_21068014
ES.7309.13	chr12	+	979	3	NIC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	119	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTAATGTTGTCACT	NA	False	NA	NA	False	NA	NA	NA	21040655	21090424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21040874_21063316_21063378_21089724
ES.7309.14	chr12	+	3519	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	13302	-21985	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.2350789646728	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	2	True	AATAAA	-14	NA	21053838	21068444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21053965_21062987_21063115_21063316_21063378_21065030_21066077_21066244_21067983_21068023
ES.7309.15	chr12	+	3503	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	13319	-21985	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	33.8738837454461	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	2	True	AATAAA	-14	NA	21053855	21068444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21053965_21062987_21063115_21063316_21063378_21065030_21066063_21066231_21067968_21068006
ES.7309.16	chr12	+	3491	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	13329	-21986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	30.2350789646728	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTTGTATTTTGTTGTT	NA	False	NA	1	True	AATAAA	-13	NA	21053865	21068443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21053965_21062987_21063115_21063316_21063378_21065030_21066051_21066218_21067983_21068023
ES.7309.17	chr12	+	1490	2	Intergenic	novelGene_5966	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTTTTCACAAATTTA	NA	False	NA	NA	False	NA	NA	NA	21065618	21067276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21065974_21066141
ES.7309.19	chr12	+	6534	1	Intergenic	novelGene_5967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGTGTCATTGCTCCTTT	NA	False	NA	NA	False	NA	NA	NA	21080895	21087429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21080900_21087400
ES.7309.2	chr12	+	3809	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-76	-21982	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.3938265723579	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTTGTTGTTGTTG	NA	False	NA	5	True	AATAAA	-17	NA	21040460	21068447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066077_21066244_21067983_21068023
ES.7309.3	chr12	+	3809	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-76	-21982	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.3938265723579	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTTGTTGTTGTTG	NA	False	NA	5	True	AATAAA	-17	NA	21040460	21068447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066051_21066218_21067983_21068023
ES.7309.4	chr12	+	2633	5	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-76	-23279	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	36.2146379244636	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTACTGGAGAGAAACC	NA	False	NA	NA	False	NA	NA	NA	21040460	21067150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066278_21066365
ES.7309.5	chr12	+	1813	4	Fusion	ENSMUSG00000116627.2_ENSMUSG00000092229.4	novel	619	3	NA	NA	-74	694	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAATGTCTGTGAG	NA	False	NA	NA	False	ATTAAA	-8	NA	21040462	21099022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21040874_21092935_21093335_21094662_21094832_21098188
ES.7309.6	chr12	+	2767	4	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-59	-22987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.88561808316413	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTTTTACAACTCTA	NA	False	NA	NA	False	NA	NA	NA	21040477	21067442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21065030_21066077_21066244
ES.7309.7	chr12	+	2745	5	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-59	-23150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.2146379244636	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTCACAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	21040477	21067279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066278_21066365
ES.7309.8	chr12	+	2526	5	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-58	-23288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	36.2146379244636	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACACACTACTGG	NA	False	NA	NA	False	NA	NA	NA	21040478	21067141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066077_21066244
ES.7309.9	chr12	+	3736	6	NNC	ENSMUSG00000116627.2	novel	1230	4	NA	NA	-5	-21988	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	32.3938265723579	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGTATTTTGTTG	NA	False	NA	-1	True	AATAAA	-11	NA	21040531	21068441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21040874_21062987_21063115_21063316_21063378_21065030_21066086_21066249_21067983_21068023
ES.731.10	chr1	-	7223	33	NIC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	44	1021	combination_of_known_junctions	FALSE	canonical	3	23	junction_32	14.0823124321789	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTTTTCCCTTAT	NA	False	NA	NA	False	AATATA	-44	NA	74130466	73952048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ES.731.11	chr1	-	6222	30	NNC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	-61	1002	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	18.7756008341283	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAAATTGACAAGAAAT	NA	False	NA	NA	False	AATAAA	-32	NA	74163669	73952067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964335_73981172_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ES.731.12	chr1	-	7344	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-120	2680	-120	999	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGGTAAATTGACAAGA	NA	False	NA	NA	False	AATAAA	-29	NA	74163728	73952070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ES.731.13	chr1	-	7497	33	NIC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	24	999	combination_of_known_junctions	FALSE	canonical	3	14	junction_32	15.0083310198036	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGGTAAATTGACAAGA	NA	False	NA	NA	False	AATAAA	-29	NA	74137811	73952070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
ES.731.15	chr1	-	4478	15	NNC	ENSMUSG00000055322.17	novel	5595	28	NA	NA	10232	965	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	22.2352909417733	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATATAAGAAAAA	9970	False	NA	NA	False	NA	NA	NA	73991970	73952104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960929_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579
ES.731.16	chr1	-	1807	7	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	7639	965	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.7805051019634	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATATAAGAAAAA	3288	False	NA	NA	False	NA	NA	NA	73959737	73952104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953155_73953536_73953834_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665
ES.731.17	chr1	-	3720	12	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	388	937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.3677065799583	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACATACTGATAGAATC	NA	False	NA	NA	False	NA	NA	NA	73969276	73952132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969253
ES.731.18	chr1	-	3069	12	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	383	281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.3677065799583	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCTGCTGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	73969281	73952788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969253
ES.731.19	chr1	-	6546	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-40	3398	-40	281	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACCTGCTGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	74163648	73952788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ES.731.2	chr1	-	9984	33	NIC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_32	14.0823124321789	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	NA	False	NA	-3	True	TATAAA	-22	NA	74130569	73949390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ES.731.20	chr1	-	6215	33	NNC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	45	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	23.891171715458	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCTTGTGATACACTTA	NA	False	NA	2	True	NA	NA	NA	74130465	73953063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025537_74029469_74029554_74030833_74030899_74031256_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041441_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ES.731.21	chr1	-	6322	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-97	3679	-97	0	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	74163705	73953069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ES.731.23	chr1	-	6178	33	NNC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.1783488718431	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	74130454	73953069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961006_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030838_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ES.731.24	chr1	-	3270	15	NNC	ENSMUSG00000055322.17	novel	5595	28	NA	NA	-7329	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	22.1953295326117	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	73987502	73953069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73987358
ES.731.25	chr1	-	3246	15	NNC	ENSMUSG00000055322.17	novel	5595	28	NA	NA	-7838	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	22.1953295326117	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	9877	False	NA	-4	True	NA	NA	NA	73988011	73953069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73987891
ES.731.28	chr1	-	6041	31	NIC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	207	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	19.4421077961099	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGTCCCTTGTGAT	NA	False	NA	-5	True	NA	NA	NA	74137628	73953070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
ES.731.29	chr1	-	6587	33	NIC	ENSMUSG00000055322.17	novel	9904	33	NA	NA	-66	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_32	15.0083310198036	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGTCCCTTGTGAT	NA	False	NA	-5	True	NA	NA	NA	74137901	73953070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
ES.731.30	chr1	-	4778	16	NIC	ENSMUSG00000055322.17	novel	5595	28	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	21.4832234287336	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTGTCCCTTGTGAT	6345	False	NA	-5	True	NA	NA	NA	74002192	73953070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74002069
ES.731.31	chr1	-	2786	12	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	383	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.3677065799583	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGTCCCTTGTGA	NA	False	NA	-6	True	NA	NA	NA	73969281	73953071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969253
ES.731.32	chr1	-	4225	12	NIC	ENSMUSG00000055322.17	novel	5595	28	NA	NA	9156	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	24.0986265511728	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGTCCCTTGTGA	8894	False	NA	-6	True	NA	NA	NA	73993046	73953071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73991579
ES.731.33	chr1	-	2833	12	NIC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	-26	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	24.3677065799583	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTGTCCCTTGTGA	NA	False	NA	-6	True	NA	NA	NA	73969996	73953071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969921
ES.731.35	chr1	-	5860	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCATTTATTATTTTATG	1039	False	NA	NA	False	AAAAAG	-6	NA	74107337	74101477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74101500_74107300
ES.731.6	chr1	-	6457	12	NNC	ENSMUSG00000055322.17	novel	2813	12	NA	NA	386	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	24.3677065799583	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCAGCCTGTGGCCTGG	NA	False	NA	-10	True	TATAAA	-15	NA	73969278	73949397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73969253
ES.731.7	chr1	-	8355	34	NNC	ENSMUSG00000055322.17	novel	5643	34	NA	NA	-52	-1657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	22.6730666706066	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGCTCTTTTGTGAAT	NA	False	NA	NA	False	TTTAAA	-16	NA	74163660	73951047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976379_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74158939_74158992_74163450
ES.731.8	chr1	-	7328	30	NIC	ENSMUSG00000055322.17	novel	9916	33	NA	NA	17	1465	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	18.848794421119	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCTTCAAGGGGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	74130493	73951604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ES.731.9	chr1	-	4550	14	ISM	ENSMUSG00000055322.17	ENSMUST00000187584.7	9916	33	149286	2214	-1051	1465	3prime_fragment	FALSE	canonical	3	55	junction_11	11.3100468506242	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTCTTCAAGGGGTCTT	5574	False	NA	NA	False	AATAAA	-15	NA	73981224	73951604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068
ES.7310.1	chr12	-	187	1	Intergenic	novelGene_5965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	21063996	21063809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21063800_21064000
ES.7311.1	chr12	+	180	1	Intergenic	novelGene_5968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	21144045	21144225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21144000_21144200
ES.7312.1	chr12	+	302	1	Intergenic	novelGene_5969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCAAAAACCAATCACTT	NA	False	NA	NA	False	NA	NA	NA	21152667	21152969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21152700_21153000
ES.7313.1	chr12	+	5600	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-259	-1996	-53	4	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATCTGTAAAGTATTAG	NA	False	NA	24	True	AATAAA	-20	NA	21161695	21320176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.10	chr12	+	4784	27	NNC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	21.2335561158616	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCATCTGTAAAGTATT	NA	False	NA	22	True	AATAAA	-18	NA	21161755	21320174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21317718_21318868_21319498
ES.7313.11	chr12	+	4910	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	20	True	AATAAA	-16	NA	21161756	21320172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318865_21319489
ES.7313.12	chr12	+	5015	29	NNC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	22.646236791492	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTTCATCTGTAAAG	NA	False	NA	18	True	AATAAA	-14	NA	21161756	21320170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21306475_21306611_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318844_21319496
ES.7313.13	chr12	+	5459	26	NIC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.6106471878732	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161756	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21162171_21218204_21218278_21235098_21235245_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.15	chr12	+	5416	26	NIC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	5	-28	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	16.9088852382409	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAATAAAGTACTTT	NA	False	NA	-8	True	AATAAA	-31	NA	21161761	21320144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.16	chr12	+	5469	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.3337952399623	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161767	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21161989_21162042_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.17	chr12	+	5659	28	NIC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_23	19.3616934039294	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	20	True	AATAAA	-16	NA	21161767	21320172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21306475_21306611_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.19	chr12	+	5506	27	NNC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	29	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.5442297633205	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCATCTGTAAAGTATT	NA	False	NA	22	True	AATAAA	-18	NA	21161785	21320174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235249_21249550_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.2	chr12	+	4933	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTTCATCTGTAAAG	NA	False	NA	18	True	AATAAA	-14	NA	21161728	21320170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318874_21319501
ES.7313.20	chr12	+	5183	27	NNC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	132	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	16.5835253673478	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCATCTGTAAAGTATT	NA	False	NA	22	True	AATAAA	-18	NA	21162086	21320174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315511_21315888_21316012_21317718
ES.7313.21	chr12	+	5225	27	NNC	ENSMUSG00000052632.17	novel	1609	10	NA	NA	55906	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	16.1515108202034	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTCATCTGTAAAGTAT	2984	False	NA	21	True	AATAAA	-17	NA	21217860	21320173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21217964_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.22	chr12	+	5224	27	NNC	ENSMUSG00000052632.17	novel	1609	10	NA	NA	55932	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6271325989041	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGACATGGTTCATCTG	3010	False	NA	13	True	AATAAA	-9	NA	21217886	21320165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21217997_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.23	chr12	+	5505	29	NNC	ENSMUSG00000052632.17	novel	1609	10	NA	NA	55936	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6638896300611	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACATGGTTCATCTGTAAA	3014	False	NA	17	True	AATAAA	-13	NA	21217890	21320169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21217997_21218204_21218278_21222284_21222478_21223104_21223193_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.24	chr12	+	5121	26	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	56248	-1990	56248	-2	3prime_fragment	FALSE	canonical	3	55	junction_3	9.4584565337057	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTTCATCTGTAAAG	3326	False	NA	18	True	AATAAA	-14	NA	21218202	21320170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.25	chr12	+	5506	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	56256	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.328061890255	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATGGTTCATCTGTAA	3334	False	NA	16	True	AATAAA	-12	NA	21218210	21320168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21218278_21232325_21232459_21234062_21234325_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.26	chr12	+	2123	3	ISM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	87896	60964	87896	6296	internal_fragment	FALSE	canonical	3	60	junction_1	5.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGACTTAATTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	21249850	21257216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_21250931_21253960_21254091_21256303
ES.7313.27	chr12	+	5557	10	NIC	ENSMUSG00000052632.17	novel	5097	23	NA	NA	132793	-1	intron_retention	FALSE	canonical	3	62	junction_8	8.7488976377909	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	7235	False	NA	19	True	AATAAA	-15	NA	21294747	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21294877_21297288_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.28	chr12	+	3016	3	NNC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	132959	-18281	intron_retention	FALSE	non_canonical	0	0	junction_1	45	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATCCTGCTCAAAGCC	7401	False	NA	NA	False	NA	NA	NA	21294913	21299899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21295902_21295943_21297375_21299302
ES.7313.29	chr12	+	2900	12	NNC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	135164	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.5210941822643	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	9606	False	NA	19	True	AATAAA	-15	NA	21297118	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21297150_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318868_21319498
ES.7313.3	chr12	+	5473	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161737	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318799_21318878
ES.7313.4	chr12	+	3207	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-217	355	-11	-355	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCGTTTTGTTACT	NA	False	NA	NA	False	ACTAAA	-32	NA	21161737	21317825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.5	chr12	+	4912	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161739	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318856_21319494
ES.7313.6	chr12	+	5402	26	NIC	ENSMUSG00000052632.17	novel	3345	27	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.8690960042321	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATGGTTCATCTGTAA	NA	False	NA	16	True	AATAAA	-12	NA	21161739	21320168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21162171_21218204_21218278_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.7	chr12	+	3300	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-207	252	-1	-252	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTCGAGTTTTATAT	NA	False	NA	NA	False	NA	NA	NA	21161747	21317928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ES.7313.8	chr12	+	3207	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161747	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21317764_21320099
ES.7313.9	chr12	+	4904	28	NNC	ENSMUSG00000052632.17	novel	5552	28	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	16.3337952399623	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCATCTGTAAAGT	NA	False	NA	19	True	AATAAA	-15	NA	21161755	21320171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718_21318868_21319498
ES.7314.1	chr12	+	2426	20	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	148	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	299.681640866731	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCCTGTTTACTTTTGC	NA	False	NA	16	True	AATAAA	-20	NA	21335673	21364839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21335713_21336446_21336546_21338735_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.10	chr12	+	5067	17	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	11	3	intron_retention	FALSE	canonical	3	699	junction_9	65.3546813548961	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCCTGTTTACTTTTGC	NA	False	NA	16	True	AATAAA	-20	NA	21336369	21364839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.11	chr12	+	5665	15	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	12	-4	intron_retention	FALSE	canonical	0	0	junction_1	339.82511258419	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGGGTGCCTGTTTA	NA	False	NA	9	True	AATAAA	-13	NA	21336370	21364832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21343226_21343356_21344916_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360940_21362298_21362369_21363767_21363865_21364648
ES.7314.12	chr12	+	2889	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	204.113612436816	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGCCTGTTTACTTTTG	NA	False	NA	15	True	AATAAA	-19	NA	21336371	21364838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21359575_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.13	chr12	+	1841	7	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	-28	9340	13	958	5prime_fragment	FALSE	canonical	3	709	junction_4	58.0421302924771	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCTGAAAGTCTACCCG	NA	False	NA	NA	False	NA	NA	NA	21336371	21348897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789
ES.7314.14	chr12	+	3049	22	Fusion	ENSMUSG00000054309.10_ENSMUSG00000062054.8	novel	2499	18	NA	NA	15	-214	multi-exon	FALSE	non_canonical	0	0	junction_18	268.322917784927	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21336373	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21344916_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648_21364791_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.15	chr12	+	2685	18	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	15	2	intron_retention	FALSE	canonical	1	1	junction_1	267.086951097141	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGCCTGTTTACTTTTG	NA	False	NA	15	True	AATAAA	-19	NA	21336373	21364838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336952_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355471_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.16	chr12	+	2375	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	15	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	203.084604048126	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336373	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21344916_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.17	chr12	+	1402	10	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	-26	5693	15	-291	5prime_fragment	FALSE	canonical	3	699	junction_9	60.8915246793655	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACACAGGGCTGCCACA	NA	False	NA	NA	False	GATAAA	-9	NA	21336373	21352544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359
ES.7314.2	chr12	+	2382	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	-93	210	-93	11	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTACTTTTGCATCAGATG	NA	False	NA	24	True	AATAAA	-28	NA	21336265	21364847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.20	chr12	+	5147	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	16	-2	intron_retention	FALSE	canonical	0	0	junction_13	272.472823317054	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336374	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21359575_21359666_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.21	chr12	+	2275	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	203.890719763152	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336377	21364836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341735_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.22	chr12	+	2940	22	Fusion	ENSMUSG00000054309.10_ENSMUSG00000062054.8	novel	2499	18	NA	NA	-19	-216	multi-exon	FALSE	non_canonical	0	0	junction_18	266.02397041332	548	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTGTTCATGATTA	NA	False	NA	5	True	ATTAAA	-15	NA	21336380	21373604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355471_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648_21364791_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.23	chr12	+	4989	20	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_16	331.484155205576	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336381	21364836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21360491_21360672_21360769_21360940_21362298_21362369_21363767_21363865_21364648
ES.7314.24	chr12	+	2246	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	canonical	1	54	junction_15	189.83033765293	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336382	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362304_21362369_21363767_21363865_21364648
ES.7314.26	chr12	+	3686	17	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	692	junction_9	71.4444714446121	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336387	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.29	chr12	+	2220	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	204.293550243957	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGGGTGCCTGTTTA	NA	False	NA	9	True	AATAAA	-13	NA	21336399	21364832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346660_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.3	chr12	+	1628	1	NIC	ENSMUSG00000054309.10	novel	724	7	NA	NA	-59	1386	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	399	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTTGAAAGCATTCAT	NA	False	NA	NA	False	ATTAAA	-14	NA	21336299	21337927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336300_21337900
ES.7314.30	chr12	+	2229	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	200.577419063219	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336400	21364836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364655
ES.7314.32	chr12	+	2348	19	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	262.037317104941	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336434	21364836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336546_21336805_21336952_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.33	chr12	+	2066	1	FSM	ENSMUSG00000070166.3	ENSMUST00000093657.3	133	1	-868	-1065	-868	1065	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAAAGCCAGCAAGAC	NA	False	NA	NA	False	NA	NA	NA	21337059	21339125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21337100_21339100
ES.7314.34	chr12	+	3238	18	Fusion	ENSMUSG00000054309.10_ENSMUSG00000070166.3	novel	1892	13	NA	NA	-147	-2	multi-exon	FALSE	canonical	3	15	junction_1	198.896975644214	451	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21337780	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.35	chr12	+	3325	18	NNC	ENSMUSG00000054309.10	novel	1892	13	NA	NA	1949	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	264.426623936333	450	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGGTGCCTGTTTACTT	NA	False	NA	12	True	AATAAA	-16	NA	21338348	21364835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360940_21362298_21362369_21363767_21363865_21364648
ES.7314.36	chr12	+	5293	7	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	1651	0	intron_retention	FALSE	canonical	3	744	junction_1	64.8836565622568	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21352922	21364836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21362369_21363767_21363865_21364648
ES.7314.37	chr12	+	897	9	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	4136	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	421.066131979289	445	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21355407	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21355471_21356773_21356883_21357993_21358093_21358904_21359000_21359575_21359666_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.38	chr12	+	5959	3	NIC	ENSMUSG00000062054.8	novel	1890	4	NA	NA	-966	-214	intron_retention	FALSE	canonical	3	85	junction_1	185	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21365423	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367930_21368048_21369770
ES.7314.39	chr12	+	6705	2	NIC	ENSMUSG00000062054.8	novel	1890	4	NA	NA	-3	-214	intron_retention	FALSE	canonical	3	85	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366400	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367930
ES.7314.4	chr12	+	2503	19	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	259.762124088773	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336325	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21338735_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.40	chr12	+	4007	4	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	-1	-214	intron_retention	FALSE	canonical	3	85	junction_2	174.450247603404	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366402	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366514_21367376_21367430_21367930_21371457_21373289
ES.7314.41	chr12	+	880	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	1	-214	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366404	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.42	chr12	+	1154	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	17	-30	3	30	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCCAACTGTTTCATT	NA	False	NA	NA	False	TATAAA	-15	NA	21366406	21373850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.43	chr12	+	902	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	25	214	0	-214	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366414	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.44	chr12	+	2318	2	NIC	ENSMUSG00000062054.8	novel	1890	4	NA	NA	6	-622	intron_retention	FALSE	canonical	1	7	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGCAATTTTGCTACT	NA	False	NA	18	True	NA	NA	NA	21366420	21370155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366514_21367930
ES.7314.45	chr12	+	2826	2	NIC	ENSMUSG00000062054.8	novel	1890	4	NA	NA	6	-1062	intron_retention	FALSE	canonical	3	412	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTGCCATTGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	21366420	21369715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367898
ES.7314.46	chr12	+	1108	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	6	30	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCCAACTGTTTCATT	NA	False	NA	NA	False	TATAAA	-15	NA	21366420	21373850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.47	chr12	+	3159	4	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	6	-216	intron_retention	FALSE	canonical	3	412	junction_1	21.2759645296439	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTGTTCATGATTA	NA	False	NA	5	True	ATTAAA	-15	NA	21366420	21373604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367898_21368048_21369770_21371457_21373289
ES.7314.48	chr12	+	1727	5	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	6	-214	intron_retention	FALSE	canonical	3	85	junction_1	152.201141585732	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366420	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.50	chr12	+	1826	6	NNC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	7	-214	intron_retention	FALSE	canonical	0	0	junction_3	217.161138328201	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366421	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21367430_21367898_21368048_21369770_21369933_21370770_21370839_21371334_21371457_21373289
ES.7314.51	chr12	+	4132	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	7	-2249	7	-212	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	9	True	ATTAAA	-19	NA	21366421	21373608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
ES.7314.52	chr12	+	1758	5	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	7	-214	intron_retention	FALSE	canonical	3	356	junction_3	41.5481648210845	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTGTTCATGATTATT	NA	False	NA	7	True	ATTAAA	-17	NA	21366421	21373606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ES.7314.53	chr12	+	4097	4	NIC	ENSMUSG00000062054.8	novel	1890	4	NA	NA	7	-215	intron_retention	FALSE	canonical	3	85	junction_2	173.484549424117	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCTGTTCATGATTAT	NA	False	NA	6	True	ATTAAA	-16	NA	21366421	21373605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770
ES.7314.54	chr12	+	2292	5	NNC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	9	-213	intron_retention	FALSE	canonical	2	20	junction_2	188.381759998148	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTTCATGATTATTG	NA	False	NA	8	True	ATTAAA	-18	NA	21366423	21373607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21366514_21367376_21367430_21367902_21368048_21369770_21371457_21373289
ES.7314.55	chr12	+	677	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	9	1204	9	-622	multi-exon	FALSE	canonical	3	412	junction_2	19.3964487013015	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGCAATTTTGCTACT	NA	False	NA	18	True	NA	NA	NA	21366423	21370155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
ES.7314.56	chr12	+	6835	1	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	337	-212	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTTCATGATTATTGA	NA	False	NA	9	True	ATTAAA	-19	NA	21366773	21373608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21366800_21373600
ES.7314.6	chr12	+	2595	19	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	344.513420513019	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGGGTGCCTGTTTACT	NA	False	NA	11	True	AATAAA	-15	NA	21336344	21364834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336546_21338735_21338930_21340248_21340313_21341751_21341850_21343226_21343356_21344916_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352504_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.7	chr12	+	5103	17	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	-13	1	intron_retention	FALSE	canonical	2	20	junction_10	204.907563000979	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGCCTGTTTACTTTT	NA	False	NA	14	True	AATAAA	-18	NA	21336345	21364837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21355471_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7314.8	chr12	+	2314	18	NNC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	201.995494827969	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGGGGTGCCTGTTTAC	NA	False	NA	10	True	AATAAA	-14	NA	21336358	21364833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21336585_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ES.7315.1	chr12	+	176	1	Intergenic	novelGene_5972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAG	2975	False	NA	NA	False	NA	NA	NA	21420854	21421030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21420900_21421000
ES.7316.1	chr12	+	135	1	Intergenic	novelGene_5974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21488593	21488728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21488600_21488700
ES.7317.1	chr12	-	3437	2	Antisense	novelGene_ENSMUSG00000052632.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	21208762	21205146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_21208525_21208703
ES.7318.1	chr12	-	3563	8	NNC	ENSMUSG00000062352.16	novel	1921	7	NA	NA	-14	-524	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	87.1761060691963	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCGACTCTGAGTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	21336200	21317944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21319689_21319823_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ES.7318.2	chr12	-	2018	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-28	-289	-28	2	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTTCCTTTCAGTTGC	NA	False	NA	NA	False	TATAAA	-12	NA	21336126	21319804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
ES.7318.3	chr12	-	1009	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	39	873	-26	25	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGATGGCTTGGTACTT	NA	False	NA	14	True	AATAAA	-39	NA	21336246	21320679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ES.7318.4	chr12	-	1189	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	-88	600	0	11	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGGGTCTGGACAG	NA	False	NA	0	True	AATAAA	-25	NA	21336186	21320693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
ES.7319.1	chr12	-	4340	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.5324139746624	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423537	21373517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382205_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.10	chr12	-	4101	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	7	131	combination_of_known_junctions	FALSE	canonical	2	4	junction_17	36.7971151268805	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCGTATATAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	21423587	21373680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21423336
ES.7319.11	chr12	-	4025	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	56	131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	38.299493613789	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCGTATATAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	21423468	21373680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.12	chr12	-	4268	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	12	163	12	131	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCGTATATAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	21423621	21373680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.13	chr12	-	4186	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-14	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.4653141464936	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCGTATATAACAT	NA	False	NA	NA	False	AATAAA	-18	NA	21423608	21373680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375559_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.14	chr12	-	4099	20	NNC	ENSMUSG00000052593.17	novel	4469	20	NA	NA	-2	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.6575830265963	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGATTGCGTATATAACA	NA	False	NA	NA	False	AATAAA	-17	NA	21423537	21373681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375023_21375106_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.15	chr12	-	3777	16	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	7	130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	40.7034806046526	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGATTGCGTATATAACA	NA	False	NA	NA	False	AATAAA	-17	NA	21423587	21373681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390827_21399909_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.16	chr12	-	4207	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	9	130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.6675862419463	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGATTGCGTATATAACA	NA	False	NA	NA	False	AATAAA	-17	NA	21423585	21373681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383960_21384131_21386627_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.17	chr12	-	4202	19	FSM	ENSMUSG00000052593.17	ENSMUST00000127974.8	4423	19	57	164	-2	130	multi-exon	FALSE	canonical	2	4	junction_14	36.8288081684856	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGATTGCGTATATAACA	NA	False	NA	NA	False	AATAAA	-17	NA	21423537	21373681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.19	chr12	-	4203	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	25	125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.690633368008	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTGGATTGCGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	21423569	21373686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383960_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401628_21403879_21404015_21411659_21411793_21423336
ES.7319.2	chr12	-	4374	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	15	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.5857866490072	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGTGGCTACCAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21423579	21373533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401628_21403877_21404015_21411659_21411793_21423336
ES.7319.20	chr12	-	4144	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	22	125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.5857866490072	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTGGATTGCGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	21423502	21373686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401628_21403877_21404015_21411659_21411793_21423336
ES.7319.23	chr12	-	2679	9	NNC	ENSMUSG00000052593.17	novel	2540	16	NA	NA	-4200	123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	53.7558136390847	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCAGTGGATTGCGTA	2850	False	NA	NA	False	AATAAA	-10	NA	21386722	21373688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380113_21382162_21382212_21382570_21382675_21383954_21384155_21386633
ES.7319.26	chr12	-	4058	18	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	-2	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	58.7509552303997	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGTGGCATTGATGAT	NA	False	NA	68	True	NA	NA	NA	21423537	21373736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21397297_21397451_21399785_21399955_21401543_21401628_21403877_21404015_21411659_21411793_21423336
ES.7319.27	chr12	-	3979	17	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	4	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.2703491816378	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTATAGCTGTGGCAT	NA	False	NA	61	True	NA	NA	NA	21423590	21373743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21379054_21379134_21380033_21380165_21382076_21382212_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401631_21403883_21404015_21411659_21411793_21423336
ES.7319.28	chr12	-	4169	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	-15	289	-15	5	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAATTGTATTACTT	NA	False	NA	-2	True	TATAAA	-23	NA	21423648	21373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.29	chr12	-	4173	19	FSM	ENSMUSG00000052593.17	ENSMUST00000127974.8	4423	19	-39	289	0	5	multi-exon	FALSE	canonical	2	4	junction_14	36.8288081684856	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAATTGTATTACTT	NA	False	NA	-2	True	TATAAA	-23	NA	21423633	21373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.3	chr12	-	4252	20	NNC	ENSMUSG00000052593.17	novel	4469	20	NA	NA	-17	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.6575830265963	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGTGGCTACCAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21423557	21373533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375214_21375312_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.31	chr12	-	5394	18	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	7	5	intron_retention	FALSE	canonical	0	0	junction_15	49.700556623842	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAATTGTATTACTT	NA	False	NA	-2	True	TATAAA	-23	NA	21423587	21373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392984_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401628_21403877_21404015_21411659_21411793_21423336
ES.7319.33	chr12	-	4002	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	23	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	38.299493613789	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAATTGTATTACTT	NA	False	NA	-2	True	TATAAA	-23	NA	21423571	21373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.34	chr12	-	4049	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	15	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.6044034638071	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAATTGTATTACTT	NA	False	NA	-2	True	TATAAA	-23	NA	21423579	21373806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.37	chr12	-	3703	4	ISM	ENSMUSG00000052593.17	ENSMUST00000141799.2	375	5	-1509	-1716	-1509	1	intron_retention	FALSE	canonical	3	149	junction_3	12.684198393627	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	8772	False	NA	-6	True	TATAAA	-19	NA	21380800	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054
ES.7319.38	chr12	-	3092	11	NIC	ENSMUSG00000052593.17	novel	2540	16	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	62.9206643321572	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423538	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21403883_21404015_21423336
ES.7319.39	chr12	-	6649	18	NIC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	-1	1	intron_retention	FALSE	canonical	2	4	junction_13	37.8058233188567	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423634	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.4	chr12	-	4452	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	-25	16	-25	-16	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTGTGGCTACCAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21423658	21373533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.40	chr12	-	3971	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	7	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_17	36.7971151268805	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423587	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21423336
ES.7319.41	chr12	-	3209	14	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	-3101	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	42.2680933562934	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21397331	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395643_21395712_21397297
ES.7319.42	chr12	-	3843	18	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	57.0222441875092	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423556	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21384070_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21423336
ES.7319.43	chr12	-	3966	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	38.0452289566876	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423553	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.45	chr12	-	4129	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	37.5857866490072	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423611	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401628_21403877_21404015_21411659_21411793_21423336
ES.7319.46	chr12	-	3758	17	NNC	ENSMUSG00000052593.17	novel	4427	19	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	51.2466081194648	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423564	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378105_21380082_21380165_21382076_21382151_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.47	chr12	-	4059	18	NNC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	57.7796194956816	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCTTAATTGTATT	NA	False	NA	-6	True	TATAAA	-19	NA	21423635	21373810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21393000_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21423336
ES.7319.48	chr12	-	3978	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9223909624254	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAATTGTCTTAATT	NA	False	NA	-11	True	TATAAA	-14	NA	21423537	21373815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375559_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386785_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.49	chr12	-	4212	20	NNC	ENSMUSG00000052593.17	novel	4469	20	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	55.515264552535	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAATTGTCTTAATT	NA	False	NA	-11	True	TATAAA	-14	NA	21423571	21373815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390589_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21417352_21417455_21423336
ES.7319.50	chr12	-	3909	17	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	37.5819417240515	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAATTGTCTTAATT	NA	False	NA	-11	True	TATAAA	-14	NA	21423537	21373815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.51	chr12	-	3813	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	20	610	-19	-316	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTTATAAATGCTCTT	NA	False	NA	NA	False	AATAAA	-32	NA	21423613	21374127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.54	chr12	-	3652	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	7	-335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.1363852725479	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGATTTCTATAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	21423587	21374146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21384070_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.55	chr12	-	3107	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	26	1310	-13	127	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTGTATGTTGTCTCC	NA	False	NA	NA	False	ACTAAA	-17	NA	21423607	21374827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.56	chr12	-	2779	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	95	1569	2	-132	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCAGGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	21423538	21375086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.57	chr12	-	2795	2	FSM	ENSMUSG00000052593.17	ENSMUST00000132339.2	537	2	-163	-2095	-163	2	multi-exon	FALSE	canonical	3	143	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAAAAGTTG	6887	False	NA	NA	False	NA	NA	NA	21382685	21377978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21380165_21382076
ES.7319.58	chr12	-	239	1	Intergenic	novelGene_5970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTGCATTTAGAAGCT	NA	False	NA	NA	False	TATAAA	-22	NA	21406354	21406115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21406100_21406400
ES.7319.59	chr12	-	159	2	Antisense	novelGene_ENSMUSG00000116819.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	21498529	21406196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_21406305_21498478
ES.7319.6	chr12	-	4267	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	-24	-18	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	38.6595467334165	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTGTGGCTACCAA	NA	False	NA	NA	False	AATAAA	-18	NA	21423564	21373535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21403883_21404015_21411659_21411793_21423336
ES.7319.60	chr12	-	159	1	Intergenic	novelGene_5971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	21419637	21419478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21419500_21419600
ES.7319.61	chr12	-	2248	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	-34	-17	-34	17	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTTAGTTATGTG	NA	False	NA	5	True	AATAAA	-35	NA	21467672	21440054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.63	chr12	-	1915	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	27	255	-22	3	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGGCTTTGTAACAATT	NA	False	NA	NA	False	AATAAA	-23	NA	21467611	21440326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.64	chr12	-	1929	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	74	3	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_5	1362.85039531124	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGGCTTTGTAACAATT	NA	False	NA	NA	False	AATAAA	-23	NA	21467515	21440326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467394
ES.7319.66	chr12	-	1910	7	NNC	ENSMUSG00000076432.14	novel	1970	7	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1549.56105792002	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21467532	21440329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21443708_21443786_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.67	chr12	-	1920	7	NNC	ENSMUSG00000076432.14	novel	1970	7	NA	NA	56	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1577.70040107606	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTATTATGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21467533	21440336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21462933_21463027_21466798_21467133_21467504
ES.7319.69	chr12	-	1941	7	FSM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	25	4	25	-4	multi-exon	FALSE	canonical	2	21	junction_1	1514.35583114846	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTATTATGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21467564	21440336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21441717_21441801_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.70	chr12	-	1752	5	NIC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	35	-4	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	1407.80254297256	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTATTATGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21467554	21440336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21441417_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.71	chr12	-	3622	5	NIC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	56	-4	intron_retention	FALSE	canonical	3	2872	junction_4	305.133577306726	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTATTATGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21467533	21440336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21441417_21444965_21445062_21446282_21448366_21466798_21467133_21467504
ES.7319.72	chr12	-	1904	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	28	-4	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	1379.1689381653	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTTATTATGGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	21467561	21440336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467455
ES.7319.74	chr12	-	1703	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	43	451	-6	-190	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTCCATGCAGAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	21467595	21440522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.76	chr12	-	1564	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	31	602	-18	-341	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTAGCTCTGGTATTCA	NA	False	NA	NA	False	AATAAA	-21	NA	21467607	21440673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.78	chr12	-	5323	4	ISM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	14873	347	-3814	-344	3prime_fragment	FALSE	canonical	3	3292	junction_3	174.054269953049	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21452564	21440676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241
ES.7319.79	chr12	-	1597	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	56	-344	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_5	1362.85039531124	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467533	21440676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467394
ES.7319.8	chr12	-	6727	18	NIC	ENSMUSG00000052593.17	novel	4423	19	NA	NA	12	-19	intron_retention	FALSE	canonical	3	115	junction_16	16.60303886805	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGTTTGTGGCTACCA	NA	False	NA	NA	False	AATAAA	-17	NA	21423582	21373536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.80	chr12	-	1581	4	NIC	ENSMUSG00000076432.14	novel	2110	5	NA	NA	86	-344	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	1597.66830099367	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467351	21440676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21441417_21446282_21446447_21448241_21448366_21466798
ES.7319.82	chr12	-	1569	7	FSM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	56	345	56	-345	multi-exon	FALSE	canonical	2	21	junction_1	1514.35583114846	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTCGTAGCTCTGGTA	NA	False	NA	NA	False	AATAAA	-17	NA	21467533	21440677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21441717_21441801_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.84	chr12	-	3280	5	NIC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	56	-346	intron_retention	FALSE	canonical	3	2872	junction_4	305.133577306726	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTCGTAGCTCTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	21467533	21440678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21441417_21444965_21445062_21446282_21448366_21466798_21467133_21467504
ES.7319.85	chr12	-	1224	4	NIC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	56	-347	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1526.03130883857	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTCGTAGCTCTGG	NA	False	NA	NA	False	AATAAA	-15	NA	21467533	21440679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_21441417_21448241_21448366_21466798_21467133_21467504
ES.7319.87	chr12	-	1476	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	56	-348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1321.69860406978	1130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCTTCGTAGCTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	21467533	21440680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21441417_21444972_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.88	chr12	-	1262	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	54	881	5	-620	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTCTGAACCTTCT	NA	False	NA	NA	False	TTTAAA	-32	NA	21467584	21440952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ES.7319.89	chr12	-	177	2	Antisense	novelGene_ENSMUSG00000097055.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAATTACTTA	NA	False	NA	NA	False	NA	NA	NA	21469691	21445678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_21445759_21469594
ES.7319.9	chr12	-	4360	19	NNC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	7	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.2797234133755	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGTTTGTGGCTACC	NA	False	NA	NA	False	AATAAA	-16	NA	21423587	21373537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392984_21395643_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ES.7319.90	chr12	-	178	1	Intergenic	novelGene_5973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACCCTCA	NA	False	NA	NA	False	NA	NA	NA	21486882	21486704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21486700_21486900
ES.7319.91	chr12	-	177	1	Intergenic	novelGene_5975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTTCC	NA	False	NA	NA	False	NA	NA	NA	21498528	21498351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21498400_21498500
ES.732.1	chr1	-	265	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCCAGCTCCTGAT	NA	False	NA	NA	False	NA	NA	NA	74213196	74212931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74212900_74213200
ES.7320.1	chr12	-	133	1	Intergenic	novelGene_5976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21520753	21520620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21520600_21520800
ES.7321.1	chr12	-	175	1	Intergenic	novelGene_5977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21525481	21525306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21525300_21525500
ES.7322.1	chr12	-	156	1	Intergenic	novelGene_5978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAAGAAAGATTAA	NA	False	NA	NA	False	NA	NA	NA	21557986	21557830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21557800_21558000
ES.7323.1	chr12	+	469	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACAAAGGCGTTTTTTT	6093	False	NA	NA	False	ACTAAA	-19	NA	21593300	21604523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
ES.7323.2	chr12	+	444	3	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-7	162	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	67.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATCTTCTGTCTTA	6093	False	NA	NA	False	ATTAAA	-14	NA	21593300	21604684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21593347_21595309_21595401_21604377
ES.7323.3	chr12	+	630	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-7	162	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATCTTCTGTCTTA	6093	False	NA	NA	False	ATTAAA	-14	NA	21593300	21604684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
ES.7323.4	chr12	+	555	5	NNC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	67.7619915586902	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGACAAAGGCGTTTT	6096	False	NA	NA	False	ACTAAA	-16	NA	21593303	21604520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21593347_21595309_21595401_21599775_21599956_21604009_21604108_21604377
ES.7323.5	chr12	+	2645	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	-3	2181	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGCAATTAGAAATTTG	6097	False	NA	NA	False	NA	NA	NA	21593304	21606703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
ES.7323.6	chr12	+	2499	6	NNC	ENSMUSG00000109975.2	novel	363	4	NA	NA	1	3894	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.0053330963174	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTGGATCAAGCTCTT	6101	False	NA	NA	False	TATAAA	-15	NA	21593308	21608416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_21593347_21595309_21595401_21599867_21600009_21604009_21604108_21604377_21606010_21607917
ES.7323.7	chr12	+	4047	3	ISM	ENSMUSG00000109975.2	ENSMUST00000209258.2	357	4	1004	-209	1004	162	3prime_fragment	FALSE	canonical	3	113	junction_2	39	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTATCTTCTGTCTTA	9106	False	NA	NA	False	ATTAAA	-14	NA	21596313	21604684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_21599956_21604009_21604108_21604377
ES.7324.1	chr12	-	712	1	Antisense	novelGene_ENSMUSG00000109975.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTTGTTCCCTCGTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	21593394	21592682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_21592700_21593400
ES.7325.1	chr12	+	2764	1	Intergenic	novelGene_5979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACATGTATTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	21681383	21684147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_21681400_21684100
ES.7326.1	chr12	-	158	1	Intergenic	novelGene_5980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATATTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	21733282	21733124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21733100_21733300
ES.7327.1	chr12	-	4350	4	Intergenic	novelGene_5981	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	50.8002624665136	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCTTGT	NA	False	NA	NA	False	AATAAA	-3	NA	21829077	21776837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21780400_21810872_21810934_21811135_21811263_21828477
ES.7327.10	chr12	-	3334	4	Intergenic	novelGene_5990	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	64.3790856308682	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21817714	21807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809187_21809271_21810934_21811135_21811263_21817576
ES.7327.11	chr12	-	2357	4	Intergenic	novelGene_5992	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21828888	21807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.12	chr12	-	2059	4	Intergenic	novelGene_5989	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_3	55.5117605157282	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21817689	21807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21817576
ES.7327.13	chr12	-	2457	6	Intergenic	novelGene_5993	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	54.1169104809208	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21834398	21807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21809538_21810872_21810934_21811135_21811263_21828477_21828818_21834143
ES.7327.14	chr12	-	3335	4	Intergenic	novelGene_5991	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	64.3790856308682	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21817714	21807779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21810934_21811135_21811263_21817576
ES.7327.15	chr12	-	2165	5	Intergenic	novelGene_5994	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	52.2416261232363	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGTCTCCATTATTTTT	NA	False	NA	NA	False	NA	NA	NA	21828902	21807780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21808413_21808617_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.16	chr12	-	3767	1	Intergenic	novelGene_5995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATAGTCTCCATTATTTT	NA	False	NA	NA	False	NA	NA	NA	21811548	21807781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21807800_21811500
ES.7327.17	chr12	-	1649	5	Intergenic	novelGene_5996	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	52.2416261232363	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	21828905	21808420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.18	chr12	-	892	4	Intergenic	novelGene_5997	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGAATGTCATCA	NA	False	NA	NA	False	NA	NA	NA	21828904	21809260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.19	chr12	-	382	3	Intergenic	novelGene_5998	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	67	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAATATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	21817659	21810761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21810934_21811135_21811263_21817576
ES.7327.2	chr12	-	2072	4	Intergenic	novelGene_5982	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	50.8002624665136	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAAGAAACTGTCTG	NA	False	NA	NA	False	AATACA	-39	NA	21828904	21778942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21780400_21810872_21810934_21811135_21811263_21828477
ES.7327.20	chr12	-	5307	1	Intergenic	novelGene_5999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTACTTGGCTTATGT	NA	False	NA	NA	False	NA	NA	NA	21820390	21815083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21815100_21820400
ES.7327.21	chr12	-	1669	1	Intergenic	novelGene_6000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCCAAAACTAATGCCCA	NA	False	NA	NA	False	NA	NA	NA	21821930	21820261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21820300_21821900
ES.7327.22	chr12	-	3422	2	Genic_Genomic	ENSMUSG00000091105.2	novel	549	1	NA	NA	-2196	2238	multi-exon	FALSE	canonical	1	1	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTCTCTTATTCTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	21828904	21823921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_21826917_21828477
ES.7327.3	chr12	-	2971	4	Intergenic	novelGene_5983	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_3	55.5117605157282	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	21817659	21806837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21817576
ES.7327.4	chr12	-	3315	4	Intergenic	novelGene_5984	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_3	39.6063967897443	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	21828904	21806837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.5	chr12	-	3228	5	Intergenic	novelGene_5986	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	52.2416261232363	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21828903	21806839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21809538_21810872_21810934_21811135_21811263_21828477
ES.7327.6	chr12	-	4408	3	Intergenic	novelGene_5985	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	4.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	21828875	21806839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21810934_21828477
ES.7327.7	chr12	-	4638	3	Intergenic	novelGene_5987	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	48.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	21828895	21806840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21810934_21811135_21811263_21828477
ES.7327.8	chr12	-	3956	5	Intergenic	novelGene_5988	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	56.7775263638704	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTCCATTATTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	21834560	21807777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21809177_21809260_21810934_21811135_21811263_21828477_21828818_21834143
ES.7328.1	chr12	-	2911	1	Intergenic	novelGene_6001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGCAAATGCCCTTGT	NA	False	NA	NA	False	NA	NA	NA	21938614	21935703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_21935700_21938600
ES.7329.1	chr12	-	2703	2	Intergenic	novelGene_6002	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	22007885	22004243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22005077_22006015
ES.7329.2	chr12	-	1342	4	Intergenic	novelGene_6003	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	1598	False	NA	NA	False	ATTAAA	-7	NA	22029278	22004243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22005077_22006015_22006122_22007542_22007884_22029216
ES.733.1	chr1	-	177	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTATTATTTAATT	NA	False	NA	NA	False	NA	NA	NA	74213523	74213346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74213300_74213500
ES.7330.1	chr12	-	1659	1	Intergenic	novelGene_6004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22051552	22049893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22049900_22051600
ES.7331.1	chr12	+	960	3	Intergenic	novelGene_6006	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCACCAGGATCCA	NA	False	NA	NA	False	NA	NA	NA	22108645	22122216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_22108865_22112149_22112205_22121530
ES.7332.1	chr12	+	4605	1	Intergenic	novelGene_6007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAAGCTCTCCAGGACC	NA	False	NA	NA	False	NA	NA	NA	22123297	22127902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_22123300_22127900
ES.7333.1	chr12	+	8066	2	Antisense	novelGene_ENSMUSG00000093846.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAGA	NA	False	NA	NA	False	NA	NA	NA	22180909	22195173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_22187875_22194072
ES.7334.1	chr12	-	4826	1	Intergenic	novelGene_6005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCCCTGACTTTTGCAT	NA	False	NA	NA	False	AAAAAG	-10	NA	22073036	22068210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22068200_22073000
ES.7334.10	chr12	-	2736	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-12	-5642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.71404520791032	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	22206659	22171398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173543_22174762_22174867_22180145_22180207_22206232
ES.7334.11	chr12	-	2889	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	6	-5644	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	13.2476412994918	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGAAGATCTACTTTC	NA	False	NA	NA	False	NA	NA	NA	22206641	22171400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173526_22173613_22173781_22180145_22180207_22180406_22180534_22206232
ES.7334.12	chr12	-	2534	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-18	-5856	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3372087784044	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTTTATTGTTT	NA	False	NA	NA	False	NA	NA	NA	22206665	22171612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173526_22180145_22180207_22180406_22180534_22206232
ES.7334.13	chr12	-	3888	1	Intergenic	novelGene_6008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGGTTGAGCAACTTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	22178656	22174768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22174800_22178700
ES.7334.14	chr12	-	1941	6	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	17	-10394	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.0797727254384	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	22206630	22176150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22176802_22177859_22178178_22178429_22178816_22180145_22180207_22180406_22180534_22206232
ES.7334.15	chr12	-	1280	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	1	-10394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5838095160352	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	22206646	22176150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22176634_22178620_22178816_22180145_22180207_22180406_22180534_22206232
ES.7334.16	chr12	-	3667	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	19	-10394	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.3788038445484	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	22206628	22176150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178307_22178558_22179486_22180145_22180207_22180406_22180534_22206232
ES.7334.17	chr12	-	3153	3	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-13	-10395	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	22206660	22176151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178816_22180145_22180207_22206232
ES.7334.18	chr12	-	2962	2	Intergenic	novelGene_6009	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	162	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAACTCCTTGTATTTTGT	NA	False	NA	NA	False	AATAAA	-9	NA	22293788	22176153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22178639_22293311
ES.7334.19	chr12	-	2800	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	0	-10610	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5838095160352	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATTGGAATTAAGTC	NA	False	NA	NA	False	NA	NA	NA	22206647	22176366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178307_22178558_22178816_22180145_22180207_22180406_22180534_22206232
ES.7334.2	chr12	-	1442	2	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-12	97530	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	123	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAGAAAATGGT	NA	False	NA	NA	False	NA	NA	NA	22206659	22068226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22069242_22206232
ES.7334.20	chr12	-	228	1	Intergenic	novelGene_6010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTATTGTCTCTATAAT	NA	False	NA	-16	True	NA	NA	NA	22177367	22177139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22177100_22177400
ES.7334.21	chr12	-	2034	3	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-19	-11520	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACTGGAGAGAAACTCT	NA	False	NA	NA	False	NA	NA	NA	22206666	22177276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178816_22180145_22180207_22206232
ES.7334.22	chr12	-	1680	3	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	19991	-11537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	22186656	22177293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178816_22180145_22180207_22186559
ES.7334.23	chr12	-	1860	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	12	-11538	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	14.5838095160352	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	22206635	22177294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178347_22178598_22178816_22180145_22180207_22180406_22180534_22206232
ES.7334.24	chr12	-	1239	8	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	194	-12327	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3800365961676	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTCAAAATGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	22206453	22178083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22178178_22178429_22178816_22180145_22180207_22180406_22180534_22182761_22182812_22205219_22205362_22205796_22205955_22206232
ES.7334.25	chr12	-	177	1	Intergenic	novelGene_6011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	22221452	22221275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22221300_22221500
ES.7334.26	chr12	-	174	1	Intergenic	novelGene_6012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACAACAAAACATCG	NA	False	NA	NA	False	NA	NA	NA	22230052	22229878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22229900_22230100
ES.7334.27	chr12	-	2882	4	Intergenic	novelGene_6013	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	11.0855260988773	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTTGTTGTTGTTG	NA	False	NA	-5	True	NA	NA	NA	22302694	22291523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22294077_22295404_22295466_22295667_22295795_22302553
ES.7334.28	chr12	-	4173	3	Intergenic	novelGene_6014	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	12	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-43	NA	22302660	22291526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22295466_22295667_22295795_22302553
ES.7334.29	chr12	-	2756	5	Intergenic	novelGene_6015	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	21.2058364607483	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	-10	True	AATAAA	-41	NA	22302650	22291528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22292923_22292999_22294077_22295404_22295466_22295667_22295795_22302553
ES.7334.3	chr12	-	1553	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-11	25434	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.68178700572909	118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACCAAGGTCTATGA	NA	False	NA	NA	False	ATTAAA	-7	NA	22206658	22140322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22141142_22144661_22144768_22146162_22146365_22206232
ES.7334.30	chr12	-	4079	4	Intergenic	novelGene_6016	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	21.249836600679	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAATGGTGATTGCTA	NA	False	NA	-29	True	AATAAA	-22	NA	22302664	22291547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22292923_22292999_22295466_22295667_22295795_22302553
ES.7334.31	chr12	-	434	3	Intergenic	novelGene_6017	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	12	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTGTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	22302669	22295274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22295466_22295667_22295795_22302553
ES.7334.32	chr12	-	3500	1	Intergenic	novelGene_6018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTACTTGGCTTATGCC	NA	False	NA	NA	False	NA	NA	NA	22302664	22299164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22299200_22302700
ES.7334.4	chr12	-	7182	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	12	-1345	intron_retention	FALSE	canonical	1	1	junction_2	13.2476412994918	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTGTGGCTCCATGC	NA	False	NA	NA	False	NA	NA	NA	22206635	22167101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173526_22173613_22173781_22180145_22180207_22180406_22180534_22206232
ES.7334.5	chr12	-	6558	1	NIC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	32983	-1350	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTGGTGGTGTGGCTC	NA	False	NA	NA	False	NA	NA	NA	22173664	22167106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_22167100_22173700
ES.7334.6	chr12	-	3203	1	NIC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	32071	-5617	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCTAGATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	22174576	22171373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_22171400_22174600
ES.7334.7	chr12	-	2743	4	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-9	-5638	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.3372087784044	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCTACTTTCCTATTT	NA	False	NA	NA	False	NA	NA	NA	22206656	22171394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173526_22180145_22180207_22180406_22180534_22206232
ES.7334.8	chr12	-	2909	5	NNC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	3	-5642	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	13.2476412994918	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	22206644	22171398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22173526_22173613_22173796_22180145_22180207_22180406_22180534_22206232
ES.7334.9	chr12	-	2572	2	NIC	ENSMUSG00000093846.2	novel	2857	5	NA	NA	-13	-5642	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTACTTTCCT	NA	False	NA	NA	False	NA	NA	NA	22206660	22171398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_22173543_22206232
ES.7335.1	chr12	-	7589	1	Intergenic	novelGene_6019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTGACCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	22319292	22311703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22311700_22319300
ES.7336.1	chr12	-	3029	1	FSM	ENSMUSG00000092597.3	ENSMUST00000101544.6	128	1	-272	-2629	-272	2629	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAAAGATGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	22324785	22321756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_22321800_22324800
ES.7337.1	chr12	+	157	1	Intergenic	novelGene_6024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	22792741	22792898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_22792700_22792900
ES.7338.1	chr12	+	1757	3	Intergenic	novelGene_6026	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	23084866	23090395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23085431_23089172_23090223_23090252
ES.7339.1	chr12	+	1500	1	Intergenic	novelGene_6031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGGTTTGGTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	23281228	23282728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23281200_23282700
ES.734.1	chr1	+	214	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATAAATATTAT	NA	False	NA	NA	False	NA	NA	NA	74225500	74225714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74225500_74225700
ES.734.10	chr1	+	4639	9	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-4	0	intron_retention	FALSE	canonical	3	2050	junction_2	168.849045007664	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7844	False	NA	14	True	AATAAA	-19	NA	74275671	74307368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74276059_74285238_74285274_74287290_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.11	chr1	+	1227	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	17	195	-3	26	multi-exon	FALSE	canonical	3	1389	junction_1	306.215936881149	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTAATTCCCTTTTAT	7845	False	NA	44	True	ATTAAA	-24	NA	74275672	74307173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.12	chr1	+	5420	1	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-3	5045	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	639	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAGTGAACACAACAGA	7845	False	NA	NA	False	NA	NA	NA	74275672	74281092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275700_74281100
ES.734.13	chr1	+	1406	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	701.587350228038	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7850	False	NA	13	True	AATAAA	-18	NA	74275677	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306939
ES.734.14	chr1	+	2354	10	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	7	-1	intron_retention	FALSE	canonical	3	1389	junction_1	316.731923100768	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7855	False	NA	13	True	AATAAA	-18	NA	74275682	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.16	chr1	+	1415	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_8	676.556457363316	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	7864	False	NA	12	True	AATAAA	-17	NA	74275691	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301759_74302901_74303003_74303511_74303613_74306929
ES.734.17	chr1	+	4929	10	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	1389	junction_1	322.339020977052	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7865	False	NA	13	True	AATAAA	-18	NA	74275692	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.2	chr1	+	156	2	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1067	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAATTTTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	74225504	74396703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74225573_74396615
ES.734.24	chr1	+	1902	10	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	1389	junction_1	281.005645565185	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7873	False	NA	13	True	AATAAA	-18	NA	74275700	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303613_74306929
ES.734.26	chr1	+	2763	9	NIC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	-8	5	intron_retention	FALSE	canonical	3	1867	junction_3	190.656759649376	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTTGATTTTTCTCG	7873	False	NA	19	True	AATAAA	-24	NA	74275700	74307373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74303003_74303511_74303613_74306929
ES.734.27	chr1	+	4708	10	ISM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	46	2	-7	-2	intron_retention	FALSE	canonical	3	1389	junction_1	321.329183928949	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	7874	False	NA	12	True	AATAAA	-17	NA	74275701	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511
ES.734.28	chr1	+	1377	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	888.258318283595	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTTGAGAATTTGTTGA	7875	False	NA	10	True	AATAAA	-15	NA	74275702	74307364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287398_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302906_74303003_74303511_74303613_74306929
ES.734.3	chr1	+	1502	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	-59	-4	-59	4	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGTTGATTTTTCTC	7769	False	NA	18	True	AATAAA	-23	NA	74275596	74307372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.30	chr1	+	1286	10	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	700.796372390408	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7879	False	NA	13	True	AATAAA	-18	NA	74275706	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74306929
ES.734.31	chr1	+	1390	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	31	-17	-2	16	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACTTGATCAACTTAAT	7879	False	NA	34	True	ATTAAA	-14	NA	74275706	74307163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.32	chr1	+	1262	7	NIC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	0	-2	intron_retention	FALSE	canonical	0	0	junction_6	790.780205451131	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	7881	False	NA	12	True	AATAAA	-17	NA	74275708	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74306929
ES.734.33	chr1	+	5430	8	NNC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	0	-3	intron_retention	FALSE	canonical	2	41	junction_7	728.600615661871	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGAGAATTTGTTGAT	7881	False	NA	11	True	AATAAA	-16	NA	74275708	74307365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301759_74302901
ES.734.34	chr1	+	1322	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	674.638540256929	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTATCTTACTTGAGAA	7885	False	NA	2	True	AATAAA	-7	NA	74275712	74307356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303559_74303613_74306929
ES.734.35	chr1	+	2538	10	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	4	-1	intron_retention	FALSE	canonical	3	1389	junction_1	303.720306682576	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7885	False	NA	13	True	AATAAA	-18	NA	74275712	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74303003_74303511_74303613_74306929
ES.734.37	chr1	+	2090	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	703.17454447669	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7891	False	NA	13	True	AATAAA	-18	NA	74275718	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293271_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.38	chr1	+	1654	10	NNC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_7	704.649391848243	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	7891	False	NA	12	True	AATAAA	-17	NA	74275718	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302828_74303003_74303511_74303613_74306929
ES.734.4	chr1	+	1701	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	-71	-226	-51	4	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTGTTGATTTTTCTC	7777	False	NA	18	True	AATAAA	-23	NA	74275604	74307372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.40	chr1	+	5535	9	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	16	-1	intron_retention	FALSE	canonical	3	1389	junction_1	311.945407884136	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7897	False	NA	13	True	AATAAA	-18	NA	74275724	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74290459_74293986_74294174_74295116_74295211_74301617_74303003_74303511_74303613_74306929
ES.734.41	chr1	+	1505	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113819.2	1313	11	28	-220	28	-1	multi-exon	FALSE	canonical	3	31	junction_2	696.999605451825	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7909	False	NA	13	True	AATAAA	-18	NA	74275736	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74275770_74275976_74276207_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.44	chr1	+	1445	9	NIC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	52	-2	intron_retention	FALSE	canonical	0	0	junction_5	754.456333643638	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	7933	False	NA	12	True	AATAAA	-17	NA	74275760	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.45	chr1	+	5665	8	NIC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	186	-2	intron_retention	FALSE	canonical	3	1867	junction_3	220.26959362915	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAGAATTTGTTGATT	8067	False	NA	12	True	AATAAA	-17	NA	74275894	74307366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74295211_74301617_74301745_74302901_74303003_74303511
ES.734.46	chr1	+	1412	10	NNC	ENSMUSG00000006304.15	novel	1404	10	NA	NA	194	-1	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_7	692.198430124388	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	8075	False	NA	13	True	AATAAA	-18	NA	74275902	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301759_74302901_74303003_74303511_74303613_74306929
ES.734.47	chr1	+	358	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	645	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAAAAGTAGA	1128	False	NA	NA	False	NA	NA	NA	74282354	74282712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74282400_74282700
ES.734.48	chr1	+	1173	7	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	14770	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	877.035473753612	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	5423	False	NA	13	True	AATAAA	-18	NA	74290478	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74290604_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.49	chr1	+	880	5	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	20540	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	1044.91444027729	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	249	False	NA	13	True	AATAAA	-18	NA	74296248	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74296362_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.5	chr1	+	1460	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	696.995272580812	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7798	False	NA	13	True	AATAAA	-18	NA	74275625	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295124_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.50	chr1	+	1372	2	Genic_Genomic	ENSMUSG00000064272.4	novel	1075	1	NA	NA	-1468	89	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATTCCTTCCATATCT	NA	False	NA	NA	False	AATAAA	-18	NA	74316240	74318872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_74316457_74317716
ES.734.51	chr1	+	704	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	33	3	33	-3	multi-exon	FALSE	canonical	3	1381	junction_1	89	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGGCCAGGTTGAATT	NA	False	NA	3	True	AATAAA	-21	NA	74324121	74326610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74324297_74325000_74325170_74326250
ES.734.52	chr1	+	570	3	NNC	ENSMUSG00000026179.15	novel	2937	10	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	688	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGGAAAGGAGGCCAGGT	NA	False	NA	-3	True	AATAAA	-15	NA	74324203	74326604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74324297_74325000_74325170_74326296
ES.734.53	chr1	+	2944	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	1	-8	1	-2	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGCTCTCAATGGCTTA	NA	False	NA	11	True	NA	NA	NA	74324204	74392851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ES.734.54	chr1	+	1016	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	125	-401	0	401	multi-exon	FALSE	canonical	3	1381	junction_1	89	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-42	NA	74324213	74327014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74324297_74325000_74325170_74326250
ES.734.56	chr1	+	2092	2	FSM	ENSMUSG00000026179.15	ENSMUST00000129219.2	881	2	10	-1221	5	401	multi-exon	FALSE	canonical	3	1381	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTAAAAAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-42	NA	74324218	74327014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74324297_74325000
ES.734.57	chr1	+	565	3	NNC	ENSMUSG00000026179.15	novel	740	3	NA	NA	8	4555	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	687	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTGTAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	74324221	74331168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74324297_74325000_74325170_74330847
ES.734.58	chr1	+	2401	1	Antisense	novelGene_ENSMUSG00000006301.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAATTTAAGTCACAAAA	9018	False	NA	NA	False	AAAAAG	-19	NA	74341688	74344089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_74341700_74344100
ES.734.59	chr1	+	197	1	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAGAGAGAGAG	5037	False	NA	NA	False	NA	NA	NA	74357494	74357691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74357500_74357700
ES.734.6	chr1	+	1408	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	685.104145367695	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7805	False	NA	13	True	AATAAA	-18	NA	74275632	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275717_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.60	chr1	+	2898	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	-37	-2	-37	2	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGAGCTCTCAATGG	9326	False	NA	7	True	NA	NA	NA	74371731	74392847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ES.734.61	chr1	+	2810	9	NNC	ENSMUSG00000026179.15	novel	2859	9	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.2871025367823	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGGTCTGAGCTCTCA	9371	False	NA	3	True	NA	NA	NA	74371776	74392843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388521_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ES.734.62	chr1	+	2891	9	NNC	ENSMUSG00000026179.15	novel	2859	9	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.3598365118064	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTGAGCTCTCAATGG	9371	False	NA	7	True	NA	NA	NA	74371776	74392847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74371989_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ES.734.63	chr1	+	4373	1	FSM	ENSMUSG00000026179.15	ENSMUST00000190398.2	3599	1	-41	-733	12	733	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCACTTCTCTGTTCAG	9375	False	NA	NA	False	NA	NA	NA	74371780	74376153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74371800_74376200
ES.734.64	chr1	+	2676	8	ISM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	14774	2	14721	0	3prime_fragment	FALSE	canonical	3	67	junction_7	9.54473890770861	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGGTCTGAGCTCTCA	1051	False	NA	3	True	NA	NA	NA	74386542	74392843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ES.734.65	chr1	+	173	1	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGGAAAAAAAAAAAAAAGC	3271	False	NA	NA	False	NA	NA	NA	74396545	74396718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74396500_74396700
ES.734.7	chr1	+	1399	11	NNC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	683.949888515233	695	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAATTTGTTGATTT	7808	False	NA	13	True	AATAAA	-18	NA	74275635	74307367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74275711_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ES.734.8	chr1	+	4822	3	ISM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	-12	15464	8	-15464	intron_retention	FALSE	canonical	3	2050	junction_2	23	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAATGTAAGATGGACAGC	7836	False	NA	NA	False	NA	NA	NA	74275663	74291682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74276059_74285238_74285274_74287290
ES.7340.1	chr12	-	3235	6	Intergenic	novelGene_6020	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	21.0009523593574	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	22506866	22495281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22497726_22497894_22498168_22498503_22498722_22500163_22500225_22500426_22500554_22506754
ES.7340.10	chr12	-	3307	5	NNC	ENSMUSG00000113123.3	novel	329	3	NA	NA	-91	45546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.22841614740048	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTTCTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	22673437	22590343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22592899_22602130_22602220_22637248_22637310_22637509_22637637_22672962
ES.7340.11	chr12	-	3993	5	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-86	3480	intron_retention	TRUE	non_canonical	0	0	junction_1	6.28490254498827	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATTTGGTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	22673432	22632409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635035_22635202_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.12	chr12	-	4115	4	NIC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-43	3477	intron_retention	FALSE	canonical	2	7	junction_1	4.08248290463863	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGTATTTGGTTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	22673389	22632412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.13	chr12	-	2834	4	NIC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-51	2188	intron_retention	FALSE	canonical	2	7	junction_1	4.08248290463863	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTGGAGAGAAATATAT	NA	False	NA	NA	False	NA	NA	NA	22673397	22633701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.15	chr12	-	2784	6	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-44	2174	intron_retention	FALSE	non_canonical	0	0	junction_1	4.71593044902064	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22673390	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635035_22635202_22635913_22637248_22637310_22637509_22637637_22646429_22646569_22672962
ES.7340.16	chr12	-	2644	5	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-43	2174	intron_retention	TRUE	non_canonical	0	0	junction_1	6.28490254498827	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22673389	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635010_22635177_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.17	chr12	-	2953	8	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-122355	2174	intron_retention	TRUE	non_canonical	0	0	junction_1	4.67297920965604	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22795701	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635035_22635202_22635913_22637248_22637310_22637509_22637637_22646429_22646569_22647486_22647671_22672962_22673336_22795661
ES.7340.18	chr12	-	2565	5	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	36	2174	intron_retention	TRUE	non_canonical	0	0	junction_1	6.28490254498827	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22673310	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635023_22635190_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.19	chr12	-	2622	6	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-122346	2174	intron_retention	TRUE	non_canonical	0	0	junction_1	6.67532770731145	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22795692	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22635035_22635202_22635913_22637248_22637310_22637509_22637637_22672962_22673345_22795669
ES.7340.2	chr12	-	2420	7	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-13	139508	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.65832811847939	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTGTCTCTATAATC	NA	False	NA	NA	False	NA	NA	NA	22673359	22496381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22497663_22498419_22498516_22634278_22634522_22635697_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.20	chr12	-	2231	5	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-26	2174	intron_retention	FALSE	non_canonical	0	0	junction_1	6.28490254498827	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	22673372	22633715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22633790_22634353_22635913_22637248_22637310_22637509_22637637_22672962
ES.7340.21	chr12	-	4005	1	Intergenic	novelGene_6021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-26	NA	22670103	22666098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22666100_22670100
ES.7340.22	chr12	-	3965	4	Fusion	ENSMUSG00000113296.2_ENSMUSG00000113574.2_ENSMUSG00000114008.2_ENSMUSG00000113413.2	novel	562	2	NA	NA	-302	1077	intron_retention	FALSE	non_canonical	0	0	junction_1	0.942809041582063	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTCCTGTGTTGCCAC	NA	False	NA	NA	False	AATAAA	-11	NA	22795714	22716451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_22717625_22720685_22721162_22747015_22748906_22795288
ES.7340.23	chr12	-	2839	3	Fusion	ENSMUSG00000113574.2_ENSMUSG00000114008.2_ENSMUSG00000113413.2	novel	562	2	NA	NA	-256	164	intron_retention	FALSE	canonical	1	1	junction_2	0.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATAGTGGCACATGTCT	NA	False	NA	NA	False	GATAAA	-19	NA	22795668	22720598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_22721162_22747015_22748912_22795288
ES.7340.24	chr12	-	2588	1	Intergenic	novelGene_6022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGTCATCACTCCT	NA	False	NA	NA	False	NA	NA	NA	22726214	22723626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22723600_22726200
ES.7340.25	chr12	-	5702	1	Intergenic	novelGene_6023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAACAAAAAATATAG	NA	False	NA	NA	False	NA	NA	NA	22745825	22740123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_22740100_22745800
ES.7340.26	chr12	-	1184	4	Fusion	ENSMUSG00000113574.2_ENSMUSG00000113413.2	novel	562	2	NA	NA	-292	-1397	multi-exon	FALSE	canonical	1	3	junction_1	20.237478982214	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCTGAGCTCATCCAT	NA	False	NA	NA	False	GATAAA	-37	NA	22795704	22748331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_22748912_22778007_22778069_22778268_22778396_22795288
ES.7340.27	chr12	-	3063	4	Genic_Genomic	ENSMUSG00000113569.2	novel	1449	1	NA	NA	-142488	1839	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTTGTATTTGGATGT	NA	False	NA	-10	True	AATAAA	-12	NA	22919079	22773303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22775218_22775301_22776179_22776263_22776277_22918820
ES.7340.28	chr12	-	2197	5	Genic_Genomic	ENSMUSG00000113574.2_ENSMUSG00000113569.2	novel	1449	1	NA	NA	-291	1839	multi-exon	TRUE	non_canonical	0	0	junction_1	19.9624647776771	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTTGTATTTGGATGT	NA	False	NA	-10	True	AATAAA	-12	NA	22795703	22773303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22774284_22776056_22776671_22778007_22778069_22778268_22778396_22795288
ES.7340.29	chr12	-	3180	4	Genic_Genomic	ENSMUSG00000113569.2	novel	1449	1	NA	NA	-141850	1838	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTTGTATTTGGATG	NA	False	NA	-11	True	AATAAA	-11	NA	22918441	22773304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22775218_22775301_22776179_22776263_22776285_22918072
ES.7340.3	chr12	-	2488	6	Genic_Genomic	ENSMUSG00000113344.2	novel	133	1	NA	NA	-299	20194	multi-exon	FALSE	non_canonical	0	0	junction_1	22.1846793981793	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTCACAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	22517018	22496392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22497810_22497978_22498168_22498503_22498722_22500163_22500225_22500426_22500603_22516591
ES.7340.30	chr12	-	2726	4	Genic_Genomic	ENSMUSG00000113574.2_ENSMUSG00000113569.2	novel	1449	1	NA	NA	-302	584	multi-exon	FALSE	canonical	3	7	junction_1	18.8030730348939	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACACACACTGG	NA	False	NA	NA	False	NA	NA	NA	22795714	22774558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22776671_22778007_22778069_22778268_22778396_22795288
ES.7340.31	chr12	-	1233	4	Genic_Genomic	ENSMUSG00000113574.2_ENSMUSG00000113569.2	novel	124	1	NA	NA	-301	-908	multi-exon	FALSE	canonical	3	7	junction_1	18.8030730348939	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTGATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	22795713	22776050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22776671_22778007_22778069_22778268_22778396_22795288
ES.7340.32	chr12	-	2510	7	Genic_Genomic	ENSMUSG00000073164.12_ENSMUSG00000113876.2	novel	1407	4	NA	NA	2	38429	multi-exon	TRUE	non_canonical	0	0	junction_1	4.98887651569859	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAAAAAACATACTG	NA	False	NA	NA	False	NA	NA	NA	23060224	22917609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22918067_22918234_22918450_22918785_22920054_22921387_22921449_22921646_22921774_22956038_22956136_23059939
ES.7340.33	chr12	-	3048	5	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8566	0	intron_retention	FALSE	canonical	0	0	junction_3	8.4372685153431	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGTGAGTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	23051433	23003997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23004839_23008352_23010256_23042788_23042850_23043051_23043179_23051317
ES.7340.34	chr12	-	2916	4	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	8571	0	intron_retention	FALSE	canonical	0	0	junction_3	2.16024689946929	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGTGAGTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	23051428	23003997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23004839_23008352_23010256_23042788_23042850_23051317
ES.7340.35	chr12	-	924	5	NNC	ENSMUSG00000073164.12	novel	3370	5	NA	NA	-154307	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9.09670269933013	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAGCTGAGCTCATC	NA	False	NA	-7	True	NA	NA	NA	23214592	23009677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23010256_23042788_23042850_23043051_23043179_23051317_23051400_23214516
ES.7340.37	chr12	-	1110	4	ISM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	96	5678	21	0	5prime_fragment	FALSE	canonical	0	0	junction_2	1.69967317119759	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAGCTGAGCTCATC	NA	False	NA	-7	True	NA	NA	NA	23060189	23009677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_23010256_23042788_23042850_23043051_23043179_23059845
ES.7340.38	chr12	-	3373	1	Intergenic	novelGene_6025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAATACATAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23038603	23035230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23035200_23038600
ES.7340.39	chr12	-	7637	2	Antisense	novelGene_ENSMUSG00000113289.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTACTTCACTTATG	NA	False	NA	NA	False	NA	NA	NA	23054471	23046632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_23053374_23053575
ES.7340.4	chr12	-	2674	9	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-51	139494	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.38035386698381	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTTTTCACAAATTTA	NA	False	NA	NA	False	NA	NA	NA	22673397	22496395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22497621_22498376_22498516_22634278_22634522_22635697_22635913_22637248_22637310_22637509_22637637_22646429_22646569_22647144_22647235_22672962
ES.7340.40	chr12	-	1880	6	Fusion	ENSMUSG00000113174.2_ENSMUSG00000113798.2	novel	710	3	NA	NA	-283	573	multi-exon	FALSE	canonical	0	0	junction_2	5.89915248150105	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCAATGTCTGTGAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	23239682	23161962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23162799_23163714_23163821_23165244_23165586_23200064_23200126_23200325_23200453_23239273
ES.7340.41	chr12	-	4609	1	Intergenic	novelGene_6027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCATGTTCATGGTG	9843	False	NA	NA	False	NA	NA	NA	23179846	23175237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23175200_23179800
ES.7340.42	chr12	-	3097	1	Intergenic	novelGene_6028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTGTTGTTGCA	NA	False	NA	NA	False	NA	NA	NA	23198226	23195129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23195100_23198200
ES.7340.43	chr12	-	4695	7	Genic_Genomic	ENSMUSG00000113532.2	novel	127	1	NA	NA	-301	281617	multi-exon	FALSE	non_canonical	0	0	junction_1	18.1995115929583	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTTGTATTTGGTTG	NA	False	NA	NA	False	AATAAA	-40	NA	23477185	23195140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23197221_23197657_23198675_23336899_23337307_23445931_23446506_23447833_23447895_23448096_23448224_23476756
ES.7340.44	chr12	-	2778	3	Antisense	novelGene_ENSMUSG00002076987.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTTGTATTTGGTTG	NA	False	NA	NA	False	AATAAA	-40	NA	23337248	23195140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_23197221_23197657_23198323_23337215
ES.7340.45	chr12	-	4717	7	Genic_Genomic	ENSMUSG00000113532.2	novel	127	1	NA	NA	-321	281617	multi-exon	FALSE	non_canonical	0	0	junction_1	18.1995115929583	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTTGTATTTGGTTG	NA	False	NA	NA	False	AATAAA	-40	NA	23477205	23195140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23197221_23197657_23198604_23336826_23337307_23445931_23446506_23447833_23447895_23448096_23448224_23476756
ES.7340.46	chr12	-	125	1	Intergenic	novelGene_6029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTTTTCTAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	23199306	23199181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23199200_23199300
ES.7340.47	chr12	-	4964	3	Antisense	novelGene_ENSMUSG00000113085.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAAAAAAACCAGAAA	NA	False	NA	NA	False	NA	NA	NA	23214528	23204149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_23206692_23206931_23208149_23213323
ES.7340.48	chr12	-	2047	1	Intergenic	novelGene_6030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAATTTGCTTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	23221459	23219412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23219400_23221500
ES.7340.49	chr12	-	5969	1	Intergenic	novelGene_6032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATAGTGTCTTCGCT	1327	False	NA	NA	False	NA	NA	NA	23314014	23308045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23308000_23314000
ES.7340.5	chr12	-	2781	7	Genic_Genomic	ENSMUSG00000113344.2	novel	133	1	NA	NA	-986	20191	multi-exon	FALSE	non_canonical	0	0	junction_1	20.5399340040052	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCTTTTCACAAATTTA	NA	False	NA	NA	False	NA	NA	NA	22517705	22496395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_22497810_22497978_22498168_22498503_22498722_22500163_22500225_22500426_22500554_22516591_22517262_22517603
ES.7340.50	chr12	-	4365	1	Intergenic	novelGene_6033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGTGTCATCACTTTTT	NA	False	NA	NA	False	NA	NA	NA	23315377	23311012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23311000_23315400
ES.7340.51	chr12	-	1649	6	NNC	ENSMUSG00000092465.3	novel	1240	6	NA	NA	-11	-54853	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.1647449677006	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCATGCTTAAG	NA	False	NA	NA	False	NA	NA	NA	23365370	23326080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23326806_23326975_23327097_23332352_23332542_23338874_23338936_23339135_23339263_23364944
ES.7340.52	chr12	-	2380	1	Intergenic	novelGene_6034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGTGGCTCCATGCTT	NA	False	NA	NA	False	NA	NA	NA	23328463	23326083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23326100_23328500
ES.7340.53	chr12	-	1523	5	NNC	ENSMUSG00000092465.3	novel	1240	6	NA	NA	-13	-54860	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.5922772190682	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTGGTGTGGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	23365372	23326087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23326806_23332352_23332542_23338874_23338936_23339135_23339263_23364944
ES.7340.54	chr12	-	1794	5	NNC	ENSMUSG00000092465.3	novel	1240	6	NA	NA	7	-54861	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.7309198626562	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGTGGTGTGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	23365352	23326088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23327098_23332352_23332542_23338874_23338936_23339135_23339263_23364944
ES.7340.55	chr12	-	2734	4	NNC	ENSMUSG00000092465.3	novel	1240	6	NA	NA	17	-59166	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	14.6363322667334	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCTACTTTCCTATTT	NA	False	NA	NA	False	NA	NA	NA	23365342	23330393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23332542_23338874_23338936_23339135_23339263_23364944
ES.7340.56	chr12	-	1729	5	NNC	ENSMUSG00000092465.3	novel	1240	6	NA	NA	-11	-65033	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	15.2561463023924	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACTGGAGAGAAACTCT	NA	False	NA	NA	False	NA	NA	NA	23365370	23336260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23336990_23337157_23337544_23338874_23338936_23339135_23339263_23364944
ES.7340.57	chr12	-	169	1	Intergenic	novelGene_6035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTAAGAA	NA	False	NA	NA	False	NA	NA	NA	23372632	23372463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23372500_23372600
ES.7340.58	chr12	-	178	1	Intergenic	novelGene_6036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	23380161	23379983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23380000_23380200
ES.7340.59	chr12	-	2164	4	Intergenic	novelGene_6037	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	10.5303793326209	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGTTTGGTCATGAG	NA	False	NA	NA	False	NA	NA	NA	23455117	23444670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23446506_23447833_23447895_23448096_23448224_23454976
ES.7340.6	chr12	-	2617	9	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-44	139490	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.21307488658818	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAAGCCTTTTCACAAA	NA	False	NA	NA	False	NA	NA	NA	22673390	22496399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22497621_22498376_22498516_22634278_22634522_22635697_22635913_22637248_22637310_22637509_22637637_22646429_22646569_22647190_22647235_22672962
ES.7340.60	chr12	-	6301	2	Intergenic	novelGene_6038	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTACTTGGCTTATGCC	NA	False	NA	NA	False	AAAACA	-9	NA	23457940	23451594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23455659_23455703
ES.7340.61	chr12	-	5738	4	Genic_Genomic	ENSMUSG00000113532.2	novel	127	1	NA	NA	-302	12686	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTGACCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	23477186	23464071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23466581_23471874_23472013_23472652_23472807_23474249
ES.7340.62	chr12	-	2375	2	Genic_Genomic	ENSMUSG00000113532.2	novel	127	1	NA	NA	-301	4186	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCTCCTGATCCAG	NA	False	NA	NA	False	NA	NA	NA	23477185	23472571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23474518_23476756
ES.7340.7	chr12	-	1624	6	Fusion	ENSMUSG00000113123.3_ENSMUSG00000113344.2	novel	734	5	NA	NA	-43	18058	multi-exon	FALSE	non_canonical	0	0	junction_4	20.4098015668943	93	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGAATGTCATCA	NA	False	NA	NA	False	NA	NA	NA	22673389	22498528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_22498722_22500163_22500225_22500426_22500554_22516591_22517262_22517603_22517750_22672962
ES.7340.8	chr12	-	3024	4	NNC	ENSMUSG00000113123.3	novel	734	5	NA	NA	-62	131203	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.24721912892465	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTGATCTCTCAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	22673408	22504686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22504772_22644119_22646569_22647190_22647235_22672962
ES.7340.9	chr12	-	3333	6	NNC	ENSMUSG00000113123.3	novel	329	3	NA	NA	-43	45548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.12741187248218	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTCCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	22673389	22590341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_22592899_22598327_22598400_22602130_22602220_22637248_22637310_22637509_22637637_22672962
ES.7341.1	chr12	-	4839	1	Intergenic	novelGene_6039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTGGTTGTCTGTTCA	NA	False	NA	NA	False	NA	NA	NA	23614671	23609832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23609800_23614700
ES.7342.1	chr12	-	1138	2	NNC	ENSMUSG00000095564.3	novel	596	3	NA	NA	-197	742	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	23622385	23617786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23618622_23622082
ES.7343.1	chr12	-	3823	1	Intergenic	novelGene_6040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTGTTGTTGCTCCTTT	4458	False	NA	NA	False	NA	NA	NA	23630274	23626451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23626500_23630300
ES.7344.1	chr12	+	180	1	Intergenic	novelGene_6043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	23681804	23681984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23681800_23682000
ES.7344.2	chr12	+	283	1	Intergenic	novelGene_6044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTCCATAACTCATTTA	NA	False	NA	NA	False	NA	NA	NA	23681806	23682089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23681800_23682100
ES.7345.1	chr12	+	6996	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23748052	23916781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754694_23916426
ES.7345.10	chr12	+	4474	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAACGTTTCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	23750522	23916777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754894_23916674
ES.7345.11	chr12	+	4499	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGTTTCCGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	23750548	23916778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754740_23916470
ES.7345.12	chr12	+	2079	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	23752969	23916780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754761_23916492
ES.7345.13	chr12	+	3173	1	Intergenic	novelGene_6048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGAAGATTGAGCAAATAC	NA	False	NA	NA	False	AAAAAG	-4	NA	23834508	23837681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23834500_23837700
ES.7345.14	chr12	+	179	1	Intergenic	novelGene_6049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	23847974	23848153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23848000_23848200
ES.7345.15	chr12	+	177	1	Intergenic	novelGene_6050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGCTGTATAG	NA	False	NA	NA	False	NA	NA	NA	23855688	23855865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23855700_23855900
ES.7345.16	chr12	+	6953	2	Intergenic	novelGene_6051	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGGTTTCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	23916761	23963489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23923696_23963470
ES.7345.17	chr12	+	4196	1	Intergenic	novelGene_6052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTATTAGCTAATGCC	NA	False	NA	NA	False	NA	NA	NA	23916762	23920958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23916800_23921000
ES.7345.18	chr12	+	5777	3	Intergenic	novelGene_6053	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAATGGTTTCCGTGTCG	NA	False	NA	NA	False	NA	NA	NA	23917877	23963489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23922137_23922198_23923701_23963473
ES.7345.19	chr12	+	5230	2	Intergenic	novelGene_6054	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23918425	23923717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23922137_23922198
ES.7345.2	chr12	+	6994	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23748052	23916781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754746_23916480
ES.7345.20	chr12	+	4887	1	Intergenic	novelGene_6055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	23918829	23923716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23918800_23923700
ES.7345.3	chr12	+	6990	1	Intergenic	novelGene_6046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTTTCCGTGTCGTTAT	NA	False	NA	NA	False	NA	NA	NA	23748053	23755043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23748100_23755000
ES.7345.5	chr12	+	6918	3	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	23748086	23916780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23748783_23748825_23754698_23916430
ES.7345.7	chr12	+	6957	2	Antisense	novelGene_ENSMUSG00000113160.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGTTTCCGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	23748087	23916778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_23754709_23916442
ES.7345.9	chr12	+	5910	2	Intergenic	novelGene_6047	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAACGTTTCCGTGTCGT	NA	False	NA	NA	False	NA	NA	NA	23749037	23755040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23749117_23749209
ES.7346.1	chr12	-	1718	5	Fusion	ENSMUSG00000113691.2_ENSMUSG00000113407.2	novel	1740	3	NA	NA	-302	189223	multi-exon	TRUE	non_canonical	0	0	junction_1	14.7986485869487	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATTCTCATGTCGA	NA	False	NA	NA	False	AATAAA	-18	NA	23850949	23641634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23641664_23812147_23813221_23833744_23833806_23834005_23834133_23850521
ES.7346.10	chr12	-	3673	5	Fusion	ENSMUSG00000113691.2_ENSMUSG00000071362.4	novel	1740	3	NA	NA	-6333	366	multi-exon	TRUE	non_canonical	2	3	junction_2	4.27200187265877	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTGTATTTGGTTG	NA	False	NA	NA	False	AATAAA	-11	NA	23840465	23828912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23831525_23831692_23832410_23833744_23833806_23834005_23834133_23840309
ES.7346.11	chr12	-	1339	1	Genic_Genomic	ENSMUSG00000113691.2	novel	NA	NA	NA	NA	2588	652	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACATACTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	23831544	23830205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23830200_23831500
ES.7346.12	chr12	-	1538	2	NNC	ENSMUSG00000113691.2	novel	1740	3	NA	NA	2216	646	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAAAAACATACT	NA	False	NA	NA	False	NA	NA	NA	23831916	23830211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23831533_23831699
ES.7346.2	chr12	-	4460	4	Genic_Genomic	ENSMUSG00000112997.2	novel	126	1	NA	NA	-343	21712	multi-exon	FALSE	canonical	3	21	junction_3	10.6249183003395	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTGTTGTTGTTGCA	NA	False	NA	NA	False	NA	NA	NA	23684819	23662638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23666442_23667883_23667945_23668146_23668274_23684350
ES.7346.3	chr12	-	4072	4	Intergenic	novelGene_6041	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_3	15.2534149181967	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	False	NA	NA	False	NA	NA	NA	23674571	23662643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23666442_23667883_23667945_23668146_23668274_23674485
ES.7346.4	chr12	-	4107	4	Intergenic	novelGene_6042	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	19.2527054375915	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	23674559	23662645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23666442_23667883_23667945_23668146_23668323_23674485
ES.7346.5	chr12	-	3270	4	Genic_Genomic	ENSMUSG00000112997.2	novel	126	1	NA	NA	-284	20581	multi-exon	FALSE	canonical	3	21	junction_3	10.6249183003395	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTCACAAATTTATTG	NA	False	NA	NA	False	NA	NA	NA	23684760	23663769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_23666442_23667883_23667945_23668146_23668274_23684350
ES.7346.6	chr12	-	3042	3	Intergenic	novelGene_6045	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTCATGGTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	23899414	23730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_23731371_23731942_23733326_23899017
ES.7346.7	chr12	-	1453	4	Fusion	ENSMUSG00000114144.2_ENSMUSG00000113407.2	novel	546	3	NA	NA	-22	761	multi-exon	FALSE	canonical	0	0	junction_2	3.77123616632825	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTGTCACAAGCAC	NA	False	NA	NA	False	AATAAA	-17	NA	23850669	23782755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23783613_23784530_23784637_23786065_23786408_23850521
ES.7346.8	chr12	-	1680	6	Fusion	ENSMUSG00000114144.2_ENSMUSG00000113691.2_ENSMUSG00000113407.2	novel	546	3	NA	NA	-84	738	multi-exon	FALSE	canonical	0	0	junction_2	12.4643491607063	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	23850731	23782778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23783613_23784530_23784637_23786065_23786408_23833744_23833806_23834005_23834133_23850521
ES.7346.9	chr12	-	1044	4	Fusion	ENSMUSG00000113691.2_ENSMUSG00000113407.2	novel	1740	3	NA	NA	-258	18114	multi-exon	FALSE	canonical	0	0	junction_1	15.4344492037203	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCCCGCAGTCTGAGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	23850905	23812743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_23813216_23833744_23833806_23834005_23834133_23850521
ES.7347.1	chr12	+	808	1	Intergenic	novelGene_6056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATTTTTTGAGTGTATA	NA	False	NA	NA	False	NA	NA	NA	23982282	23983090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_23982300_23983100
ES.7348.1	chr12	+	178	1	Intergenic	novelGene_6059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24144277	24144455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24144300_24144500
ES.7349.1	chr12	-	735	7	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	10421	114483	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.5039675043925	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAATCAATGTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	24136826	23978719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_23978814_23979904_23979990_24122830_24123025_24124359_24124421_24124622_24124750_24128850_24128918_24136719
ES.7349.2	chr12	-	6652	2	Intergenic	novelGene_6057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAAAATTTTTG	NA	False	NA	NA	False	NA	NA	NA	24011670	24004944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24007330_24007403
ES.7349.3	chr12	-	1043	1	Intergenic	novelGene_6058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	24063337	24062294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24062300_24063300
ES.7349.4	chr12	-	1933	4	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	-22	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7044966667418	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCTATAGATGTTAATA	NA	False	NA	NA	False	AGTAAA	-25	NA	24147269	24093530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_24094850_24124359_24124421_24124622_24124750_24146843
ES.7349.5	chr12	-	1840	4	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	73	-333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6707311029399	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATATCTATAGATGT	NA	False	NA	NA	False	AGTAAA	-20	NA	24147174	24093535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_24094850_24124359_24124421_24124622_24124750_24146836
ES.7349.6	chr12	-	2809	3	ISM	ENSMUSG00000073158.5	ENSMUST00000101538.5	2245	4	21166	364	21166	-364	3prime_fragment	FALSE	canonical	0	0	junction_1	14.5	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGTAAAGTAGTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	24126081	24093566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_24094856_24124359_24124421_24124622
ES.7349.7	chr12	-	3708	4	NNC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	-24	-37390	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	24147271	24130592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_24130692_24130733_24133786_24134974_24135104_24146843
ES.735.1	chr1	-	151	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	74269656	74269505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74269500_74269700
ES.7350.1	chr12	-	3126	3	Fusion	ENSMUSG00000113632.2_ENSMUSG00000112975.2	novel	550	3	NA	NA	-290	739	intron_retention	FALSE	canonical	0	0	junction_2	2	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	24302472	24225641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_24226475_24227387_24229265_24302056
ES.7350.2	chr12	-	1868	6	Fusion	ENSMUSG00000113632.2_ENSMUSG00000112975.2	novel	550	3	NA	NA	-271	739	multi-exon	FALSE	canonical	0	0	junction_3	9.63327566303384	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	24302453	24225641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_24226475_24227387_24227494_24228920_24229265_24267293_24267355_24267554_24267682_24302056
ES.7350.3	chr12	-	4332	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-306	39809	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTGGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	24302488	24262247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
ES.7350.4	chr12	-	3445	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-283	38945	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCCATTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	24302465	24263111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
ES.7350.5	chr12	-	3107	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-335	38555	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATCTAT	NA	False	NA	NA	False	NA	NA	NA	24302517	24263501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
ES.7350.6	chr12	-	158	1	Intergenic	novelGene_6060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	24279794	24279636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24279600_24279800
ES.7351.1	chr12	+	4625	2	Intergenic	novelGene_6061	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAAGAATCTGGTGTGTC	NA	False	NA	NA	False	NA	NA	NA	24410325	24415009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24414638_24414696
ES.7352.1	chr12	+	2235	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	-16	-10	-16	10	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGCATTCATTGTATT	NA	False	NA	22	True	ATTAAA	-31	NA	24548341	24608548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.10	chr12	+	4212	6	NIC	ENSMUSG00000059669.9	novel	1840	14	NA	NA	45149	-9	intron_retention	FALSE	canonical	3	219	junction_4	24.1080899284867	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTAAATGACACCTGGA	NA	False	NA	3	True	ATTAAA	-12	NA	24593777	24608529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.11	chr12	+	3284	5	NIC	ENSMUSG00000059669.9	novel	1840	14	NA	NA	46469	4	intron_retention	FALSE	canonical	3	219	junction_3	26.9014404818775	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAAACTTGCATTCAT	NA	False	NA	16	True	ATTAAA	-25	NA	24595097	24608542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.12	chr12	+	942	3	ISM	ENSMUSG00000059669.9	ENSMUST00000221372.2	1840	14	57093	-4	57093	4	3prime_fragment	FALSE	canonical	3	219	junction_1	37	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAAACTTGCATTCAT	NA	False	NA	16	True	ATTAAA	-25	NA	24605721	24608542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24606060_24606517_24606741_24608161
ES.7352.2	chr12	+	2449	16	NNC	ENSMUSG00000059669.9	novel	2209	15	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.4673243857581	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGACACCTGGAAACTT	NA	False	NA	8	True	ATTAAA	-17	NA	24548363	24608534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24548649_24550434_24550534_24551631_24551882_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.4	chr12	+	1705	12	NIC	ENSMUSG00000059669.9	novel	1840	14	NA	NA	-34	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	72.0754884344036	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGACACCTGGAAACTT	NA	False	NA	8	True	ATTAAA	-17	NA	24548575	24608534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24548649_24550434_24550534_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.5	chr12	+	1896	14	FSM	ENSMUSG00000059669.9	ENSMUST00000221372.2	1840	14	-52	-4	-33	4	multi-exon	FALSE	canonical	3	45	junction_3	59.0833329855924	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAAACTTGCATTCAT	NA	False	NA	16	True	ATTAAA	-25	NA	24548576	24608542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7352.8	chr12	+	330	3	ISM	ENSMUSG00000059669.9	ENSMUST00000222710.2	521	4	-5	4615	-5	-4615	5prime_fragment	FALSE	canonical	3	214	junction_1	44.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCAAGTTCTTAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	24548604	24555132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24548649_24550434_24550534_24554945
ES.7352.9	chr12	+	4551	14	NIC	ENSMUSG00000059669.9	novel	2209	15	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	207	junction_4	29.0056105570454	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACACCTGGAAACTTG	NA	False	NA	9	True	ATTAAA	-18	NA	24548606	24608535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ES.7353.1	chr12	-	2626	1	FSM	ENSMUSG00000113692.2	ENSMUST00000220562.2	166	1	-1385	-1075	-1385	1075	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTTCTATGCTGGTGT	NA	False	NA	NA	False	TTTAAA	-36	NA	24564223	24561597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_24561600_24564200
ES.7354.1	chr12	+	3419	15	NIC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	6.88869230207396	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCGGCTCCTGTTA	NA	False	NA	NA	False	TTTAAA	-33	NA	24622254	24667387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ES.7354.2	chr12	+	4183	15	NNC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	-24	-769	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	7.2702917999997	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTGTGTACAGATAGTG	NA	False	NA	NA	False	NA	NA	NA	24622257	24666618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24656491_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ES.7354.3	chr12	+	1102	5	NIC	ENSMUSG00000020656.17	novel	3267	9	NA	NA	-14	-12330	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	7.36121593216773	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGCGTGCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	24622267	24634566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303
ES.7354.4	chr12	+	2590	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-8	13418	-4	-13418	intron_retention	FALSE	canonical	3	20	junction_2	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCAGGATTCCATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	24622277	24633478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
ES.7354.5	chr12	+	3469	16	FSM	ENSMUSG00000020656.17	ENSMUST00000085553.13	3469	16	-3	3	-3	-3	multi-exon	FALSE	canonical	1	3	junction_5	7.44938476206816	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTGTCGGCTCCTG	NA	False	NA	NA	False	TTTAAA	-30	NA	24622278	24667384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24632883_24632961_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ES.7354.6	chr12	+	962	4	ISM	ENSMUSG00000020656.17	ENSMUST00000221426.2	3267	9	-4	15042	0	-15042	5prime_fragment	FALSE	canonical	3	20	junction_2	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTGTAGGTATAATT	NA	False	NA	NA	False	AATAAA	-19	NA	24622281	24631854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326
ES.7354.7	chr12	+	5943	14	NNC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	31	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	7.8980186265197	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGTGTCGGCTCCTGTT	NA	False	NA	NA	False	TTTAAA	-32	NA	24622316	24667386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658081_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ES.7354.8	chr12	+	3693	9	NIC	ENSMUSG00000020656.17	novel	3100	14	NA	NA	4113	-770	intron_retention	FALSE	canonical	1	3	junction_3	4.02919036532155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCTGTGTACAGATAGT	NA	False	NA	NA	False	NA	NA	NA	24634860	24666617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24661914_24662153_24662240_24664393_24664459_24665816
ES.7354.9	chr12	+	3722	4	ISM	ENSMUSG00000020656.17	ENSMUST00000020985.9	3070	14	29163	6	29163	-3	3prime_fragment	FALSE	canonical	3	12	junction_2	2.05480466765633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTGTCGGCTCCTG	8484	False	NA	NA	False	TTTAAA	-30	NA	24659910	24667384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24661914_24662153_24662240_24664393_24664459_24665816
ES.7355.1	chr12	-	174	1	Intergenic	novelGene_6062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGAAAATGTATTC	NA	False	NA	NA	False	NA	NA	NA	24626739	24626565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24626600_24626700
ES.7356.1	chr12	-	1102	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-54	-706	-54	706	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGTCTATGATGAATAC	NA	False	NA	NA	False	AATGAA	-37	NA	24689063	24687961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_24688000_24689100
ES.7356.2	chr12	-	513	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-54	-117	-54	117	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTTTGATTTGTTTA	NA	False	NA	NA	False	NA	NA	NA	24689063	24688550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_24688600_24689100
ES.7357.1	chr12	+	4104	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	-8	-10	-8	10	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAACTGTGTTCGTGTGA	NA	False	NA	28	True	TATAAA	-39	NA	24701264	24712798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ES.7357.11	chr12	+	4728	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	98	-740	98	740	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCCAGGGCCTGGTT	NA	False	NA	NA	False	AATATA	-18	NA	24701370	24713528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ES.7357.12	chr12	+	5003	3	NIC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	106	-9	intron_retention	FALSE	canonical	3	234	junction_2	13.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	9	True	TATAAA	-20	NA	24701378	24712779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24701566_24703557_24705776_24710181
ES.7357.14	chr12	+	3901	5	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	114	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.24089367362	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGTGATGTGTTATAT	NA	False	NA	12	True	TATAAA	-23	NA	24701386	24712782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181_24710699_24710763
ES.7357.16	chr12	+	3898	4	NIC	ENSMUSG00000020653.13	novel	667	3	NA	NA	1	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	122.893811434461	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	9	True	TATAAA	-20	NA	24701895	24712779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24702010_24703557_24703810_24704841_24705776_24710181
ES.7357.17	chr12	+	7255	1	NIC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	3374	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAGTGATGTGTTATA	NA	False	NA	11	True	TATAAA	-22	NA	24705526	24712781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24705500_24712800
ES.7357.2	chr12	+	3262	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	9	815	9	-815	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCAGGTCTTTTG	NA	False	NA	NA	False	ATTAAA	-39	NA	24701281	24711973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ES.7357.3	chr12	+	2066	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	75	1945	75	-1945	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTTTTTTATACCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	24701347	24710843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ES.7357.4	chr12	+	3918	4	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	80	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.011284224825	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	9	True	TATAAA	-20	NA	24701352	24712779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703557_24703810_24704841_24705776_24710260
ES.7357.5	chr12	+	3890	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	89	107	89	-107	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTTATGTAAAAGAC	NA	False	NA	-89	True	AATAAA	-19	NA	24701361	24712681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ES.7357.6	chr12	+	3931	5	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	89	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	113.24089367362	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACAAGACTTGAGTGAT	NA	False	NA	3	True	TATAAA	-14	NA	24701361	24712773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181_24711801_24711851
ES.7357.7	chr12	+	3920	5	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	92	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	113.24089367362	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	False	NA	9	True	TATAAA	-20	NA	24701364	24712779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181_24710677_24710741
ES.7357.8	chr12	+	4012	4	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	93	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	122.893811434461	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAGTGATGTGTTATA	NA	False	NA	11	True	TATAAA	-22	NA	24701365	24712781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703531_24703810_24704841_24705776_24710181
ES.7357.9	chr12	+	3153	4	NNC	ENSMUSG00000020653.13	novel	4086	4	NA	NA	95	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	117.192149907748	338	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAGTGATGTGTTATA	NA	False	NA	11	True	TATAAA	-22	NA	24701367	24712781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24701566_24703557_24703810_24705672_24705776_24710181
ES.7358.1	chr12	-	2354	4	NIC	ENSMUSG00000062563.16	novel	1856	5	NA	NA	-8	4	intron_retention	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTTAAAAATGTTAATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	24731802	24715842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_24716827_24717088_24717232_24719696_24719750_24730628
ES.7359.1	chr12	-	178	1	Intergenic	novelGene_6063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAGCAGG	NA	False	NA	NA	False	NA	NA	NA	24739748	24739570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24739600_24739700
ES.736.1	chr1	-	3698	1	Antisense	novelGene_ENSMUSG00000006304.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCTGGTGAGATGGCT	-12	True	NA	NA	False	AAAAAG	-30	NA	74303969	74300271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74300300_74304000
ES.7360.1	chr12	+	2204	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	-4	-7	-4	7	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAAATGTACATCTCTT	NA	False	NA	79	True	ATTAAA	-33	NA	24758235	24764152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.10	chr12	+	1403	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	10	780	10	25	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCCTGTTTGCCAGGCT	NA	False	NA	81	True	ATTAAA	-38	NA	24758249	24763365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.11	chr12	+	4134	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	10	-54	intron_retention	FALSE	canonical	3	5890	junction_1	419.971903822149	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTTCATGGCATACA	NA	False	NA	18	True	AATAAA	-18	NA	24758249	24764091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24760490_24761445_24762765_24762859
ES.7360.13	chr12	+	5321	4	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	29	-43	intron_retention	FALSE	canonical	3	5890	junction_1	534.78365303696	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATACAAGTATTAAATG	NA	False	NA	29	True	AATAAA	-29	NA	24758268	24764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24762765_24762859
ES.7360.14	chr12	+	5828	1	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	29	-49	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2625	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758268	24764096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758300_24764100
ES.7360.16	chr12	+	2486	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	30	-43	intron_retention	FALSE	canonical	3	5416	junction_7	481.916624171714	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATACAAGTATTAAATG	NA	False	NA	29	True	AATAAA	-29	NA	24758269	24764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759441_24760355_24760490_24761445_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.17	chr12	+	3040	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	30	-38	intron_retention	FALSE	canonical	3	5416	junction_8	465.180996360556	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGTATTAAATGATTTA	NA	False	NA	34	True	AATAAA	-34	NA	24758269	24764107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.18	chr12	+	5405	3	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	30	53	30	-53	intron_retention	FALSE	canonical	3	5890	junction_1	149.5	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGGCATACAA	NA	False	NA	19	True	AATAAA	-19	NA	24758269	24764092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937
ES.7360.19	chr12	+	3144	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	30	-39	intron_retention	FALSE	canonical	3	5890	junction_1	374.373163175624	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAGTATTAAATGATTT	NA	False	NA	33	True	AATAAA	-33	NA	24758269	24764106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.2	chr12	+	2158	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	-1	-51	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1986.03784480247	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758238	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758460_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.20	chr12	+	1317	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	35	-51	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1986.03784480247	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCAACTGGCTAC	NA	False	NA	5	True	ATTAAA	-11	NA	24758274	24763289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758460_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.21	chr12	+	2066	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	37	-61	intron_retention	FALSE	canonical	2	50	junction_4	2238.86370596281	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758276	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.22	chr12	+	2210	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	37	-41	intron_retention	FALSE	canonical	3	5416	junction_8	310.666119008816	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758276	24764104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762974_24763078
ES.7360.23	chr12	+	1411	3	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	37	4040	37	517	intron_retention	FALSE	canonical	3	5890	junction_1	149.5	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATACCTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	24758276	24760105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937
ES.7360.26	chr12	+	2360	9	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-51	intron_retention	FALSE	canonical	0	0	junction_4	2110.43709557404	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCAACTGGCTAC	NA	False	NA	5	True	ATTAAA	-11	NA	24758279	24763289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760248_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.27	chr12	+	2416	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-41	intron_retention	FALSE	canonical	3	5416	junction_8	469.764152926764	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758279	24764104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.28	chr12	+	1774	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-350	intron_retention	FALSE	canonical	2	50	junction_4	2238.86370596281	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGTCACTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	24758279	24763795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.29	chr12	+	2039	11	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1908.10962997413	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTTGAACTTTCATGG	NA	False	NA	12	True	AATAAA	-12	NA	24758279	24764085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078_24763685_24763738
ES.7360.30	chr12	+	3055	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-54	intron_retention	FALSE	canonical	3	5416	junction_8	469.628044307407	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTTCATGGCATACA	NA	False	NA	18	True	AATAAA	-18	NA	24758279	24764091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.31	chr12	+	3481	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	40	-58	intron_retention	FALSE	canonical	3	5890	junction_1	437.056701126982	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGAACTTTCATGGCA	NA	False	NA	14	True	AATAAA	-14	NA	24758279	24764087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24760490_24761445_24761802_24762659_24762765_24762859
ES.7360.32	chr12	+	4315	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-51	intron_retention	FALSE	canonical	3	5890	junction_1	439.137062885838	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758281	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.33	chr12	+	4405	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-56	intron_retention	FALSE	canonical	3	5890	junction_1	206.515132617443	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAACTTTCATGGCATA	NA	False	NA	16	True	AATAAA	-16	NA	24758281	24764089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24761541_24761667_24761802_24762659
ES.7360.34	chr12	+	2075	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-60	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	2621.7413965945	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTTGAACTTTCATGG	NA	False	NA	12	True	AATAAA	-12	NA	24758281	24764085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758572_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761447_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.36	chr12	+	2309	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-61	intron_retention	FALSE	canonical	3	6029	junction_3	352.953139052973	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758281	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.37	chr12	+	4210	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-41	intron_retention	FALSE	canonical	3	5890	junction_1	190.132848292976	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758281	24764104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24760490_24761445
ES.7360.38	chr12	+	3969	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-53	intron_retention	FALSE	canonical	3	5416	junction_7	497.276254680824	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGGCATACAA	NA	False	NA	19	True	AATAAA	-19	NA	24758281	24764092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.39	chr12	+	2026	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-37	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	1987.96093187635	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGTATTAAATGATTTAA	NA	False	NA	35	True	AATAAA	-35	NA	24758281	24764108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759411_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.4	chr12	+	2381	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	-1	-52	intron_retention	FALSE	canonical	3	5416	junction_8	462.843369159589	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCATGGCATACAAG	NA	False	NA	20	True	AATAAA	-20	NA	24758238	24764093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.41	chr12	+	2851	1	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-636	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTAAATTTAAAGACGTG	NA	False	NA	NA	False	NA	NA	NA	24758281	24761132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758300_24761100
ES.7360.42	chr12	+	3264	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-41	intron_retention	FALSE	canonical	3	5416	junction_7	491.154865638951	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758281	24764104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.44	chr12	+	2211	9	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	42	45	42	-45	intron_retention	FALSE	canonical	3	5890	junction_1	365.159468588725	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGCATACAAGTATTAAA	NA	False	NA	27	True	AATAAA	-27	NA	24758281	24764100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.46	chr12	+	4141	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-56	intron_retention	FALSE	canonical	3	5890	junction_1	441.477247431847	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAACTTTCATGGCATA	NA	False	NA	16	True	AATAAA	-16	NA	24758281	24764089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24762765_24762859
ES.7360.47	chr12	+	3782	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	42	-59	intron_retention	FALSE	canonical	3	5890	junction_1	484.411756669881	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTTGAACTTTCATGGC	NA	False	NA	13	True	AATAAA	-13	NA	24758281	24764086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24760490_24761445_24761802_24762659_24762765_24762859
ES.7360.48	chr12	+	3318	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-61	intron_retention	FALSE	canonical	3	6058	junction_5	147.606774912265	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758634_24758937_24759085_24759323_24760490_24761445_24761541_24761667_24761802_24762659
ES.7360.49	chr12	+	1163	4	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	4043	43	514	5prime_fragment	FALSE	canonical	3	5890	junction_1	216.574852341325	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATATATACCTGGGTT	NA	False	NA	NA	False	AATAAA	-19	NA	24758282	24760102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323
ES.7360.5	chr12	+	1870	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	1	322	1	-322	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTTTCTCTGTATAG	NA	False	NA	NA	False	AGTAAA	-45	NA	24758240	24763823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.50	chr12	+	4264	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-61	intron_retention	FALSE	canonical	3	5416	junction_6	536.892499068068	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24759085_24759323_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.51	chr12	+	3281	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-61	intron_retention	FALSE	canonical	3	5416	junction_6	328.00884981286	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759441_24760355_24760490_24761445_24761541_24761667_24762974_24763078
ES.7360.52	chr12	+	3755	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-62	intron_retention	FALSE	canonical	3	5416	junction_4	387.658596576936	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTCTTGAACTTTCAT	NA	False	NA	10	True	AATAAA	-10	NA	24758282	24764083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24760490_24761445_24761541_24761667_24761802_24762659_24762974_24763078
ES.7360.53	chr12	+	3722	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-61	intron_retention	FALSE	canonical	3	5890	junction_1	488.664186840002	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24759441_24760355_24760490_24761445_24762765_24762859
ES.7360.55	chr12	+	3148	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-63	intron_retention	FALSE	canonical	3	5890	junction_1	389.494177473443	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTCTTGAACTTTCA	NA	False	NA	9	True	AATAAA	-9	NA	24758282	24764082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.56	chr12	+	5277	3	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-43	intron_retention	FALSE	canonical	3	6189	junction_1	115	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATACAAGTATTAAATG	NA	False	NA	29	True	AATAAA	-29	NA	24758282	24764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758634_24758937_24759085_24759323
ES.7360.57	chr12	+	4337	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-57	intron_retention	FALSE	canonical	3	5890	junction_1	468.927166519493	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAACTTTCATGGCAT	NA	False	NA	15	True	AATAAA	-15	NA	24758282	24764088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24760490_24761445_24762765_24762859
ES.7360.58	chr12	+	2048	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	102	43	-102	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATTATTGTTACTTA	NA	False	NA	-30	True	NA	NA	NA	24758282	24764043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.60	chr12	+	1188	3	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2708	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758282	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758387_24762905_24762974_24763078
ES.7360.61	chr12	+	1707	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	443	43	362	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	2619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTATGCTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	24758282	24763702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.63	chr12	+	2384	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-51	intron_retention	FALSE	canonical	3	5890	junction_1	404.603269333746	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCAACTGGCTAC	NA	False	NA	5	True	ATTAAA	-11	NA	24758282	24763289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24762765_24762859
ES.7360.64	chr12	+	2069	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1987.89397213343	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758282	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761697_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.65	chr12	+	2216	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-61	intron_retention	FALSE	canonical	3	5416	junction_8	460.290244709792	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.66	chr12	+	2289	8	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	61	43	-61	intron_retention	FALSE	canonical	3	5890	junction_1	191.955989853967	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758282	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659
ES.7360.67	chr12	+	5700	2	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	49	43	-49	intron_retention	FALSE	canonical	3	5890	junction_1	0	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758282	24764096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558
ES.7360.68	chr12	+	4544	4	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-43	intron_retention	FALSE	canonical	3	5890	junction_1	122.377376267929	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATACAAGTATTAAATG	NA	False	NA	29	True	AATAAA	-29	NA	24758282	24764102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24761802_24762659
ES.7360.69	chr12	+	4620	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	43	-49	intron_retention	FALSE	canonical	3	5890	junction_1	482.93963132052	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758282	24764096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.7	chr12	+	4122	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	6	-41	intron_retention	FALSE	canonical	3	5890	junction_1	401.767518459231	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATACAAGTATTAAATGAT	NA	False	NA	31	True	AATAAA	-31	NA	24758245	24764104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.70	chr12	+	3822	2	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	43	1927	43	450	intron_retention	FALSE	canonical	3	5890	junction_1	0	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAGACTCGAGTGTACAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	24758282	24762218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558
ES.7360.72	chr12	+	2110	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2640.88966490882	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758283	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758550_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761806_24762659_24762765_24762859_24762974_24763078
ES.7360.73	chr12	+	4198	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-61	intron_retention	FALSE	canonical	3	5416	junction_6	530.222909098931	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758283	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.75	chr12	+	4191	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-61	intron_retention	FALSE	canonical	3	5890	junction_1	437.603016442986	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758283	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24761802_24762659_24762765_24762859
ES.7360.76	chr12	+	2124	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	2010.45982087632	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGGCATACAA	NA	False	NA	19	True	AATAAA	-19	NA	24758283	24764092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763050
ES.7360.77	chr12	+	2089	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2010.45982087632	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTTCATGGCATACA	NA	False	NA	18	True	AATAAA	-18	NA	24758283	24764091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762968_24763078
ES.7360.78	chr12	+	859	2	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	44	-51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758283	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758318_24763269
ES.7360.8	chr12	+	3398	7	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	9	-45	intron_retention	FALSE	canonical	3	5890	junction_1	402.935892336899	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGCATACAAGTATTAAA	NA	False	NA	27	True	AATAAA	-27	NA	24758248	24764100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859
ES.7360.81	chr12	+	4182	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-45	intron_retention	FALSE	canonical	3	5416	junction_5	375.513834631961	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGCATACAAGTATTAAA	NA	False	NA	27	True	AATAAA	-27	NA	24758285	24764100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758634_24758937_24759085_24759323_24761541_24761667_24761802_24762659_24762974_24763078
ES.7360.82	chr12	+	4227	5	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	46	61	46	-61	intron_retention	FALSE	canonical	3	5890	junction_1	196.71727809219	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758285	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355
ES.7360.83	chr12	+	4641	4	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-54	intron_retention	FALSE	canonical	3	5890	junction_1	528.567876435941	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTTTCATGGCATACA	NA	False	NA	18	True	AATAAA	-18	NA	24758285	24764091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24760490_24761445_24762765_24762859
ES.7360.84	chr12	+	4710	4	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-51	intron_retention	FALSE	canonical	3	5890	junction_1	236.891442554508	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758285	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24761541_24761667_24761802_24762659
ES.7360.87	chr12	+	2088	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-53	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1989.8006041924	2625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTTCATGGCATACAA	NA	False	NA	19	True	AATAAA	-19	NA	24758285	24764092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759329_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.89	chr12	+	3441	6	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-60	intron_retention	FALSE	canonical	3	5890	junction_1	188.188203668562	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTTGAACTTTCATGG	NA	False	NA	12	True	AATAAA	-12	NA	24758285	24764085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24760490_24761445_24761541_24761667_24761802_24762659
ES.7360.9	chr12	+	4496	5	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	9	-63	intron_retention	FALSE	canonical	3	5890	junction_1	239.337105355605	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTCTTGAACTTTCA	NA	False	NA	9	True	AATAAA	-9	NA	24758248	24764082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24759085_24759323_24761541_24761667_24761802_24762659
ES.7360.91	chr12	+	3283	6	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	46	49	46	-49	intron_retention	FALSE	canonical	3	5890	junction_1	181.009392021519	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758285	24764096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445
ES.7360.92	chr12	+	3997	3	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	46	-49	intron_retention	FALSE	canonical	3	6058	junction_2	90	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGGCATACAAGTAT	NA	False	NA	23	True	AATAAA	-23	NA	24758285	24764096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24760490_24761445_24761802_24762659
ES.7360.93	chr12	+	1949	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	49	-61	combination_of_known_splicesites	FALSE	canonical	2	50	junction_4	2094.31098081804	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTTGAACTTTCATG	NA	False	NA	11	True	AATAAA	-11	NA	24758288	24764084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.95	chr12	+	1058	8	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	697	856	-91	-51	3prime_fragment	FALSE	canonical	3	5416	junction_7	485.682940165029	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAACCAACTGGCTAC	NA	False	NA	5	True	ATTAAA	-11	NA	24758936	24763289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ES.7360.97	chr12	+	2244	3	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	1872	-51	intron_retention	FALSE	non_canonical	0	0	junction_2	3029	2618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24760899	24764094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24761802_24762659_24762765_24762857
ES.7361.1	chr12	-	1325	2	Intergenic	novelGene_6064	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGGCTATTAATACTCA	9470	False	NA	NA	False	AATAAA	-24	NA	24758134	24753370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24754575_24758013
ES.7361.2	chr12	-	3254	1	Antisense	novelGene_ENSMUSG00000020649.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAGCATCTTACTATG	8965	False	NA	NA	False	AAAACA	-4	NA	24758639	24755385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_24755400_24758600
ES.7362.1	chr12	+	173	1	Intergenic	novelGene_6065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	24801538	24801711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24801500_24801700
ES.7363.1	chr12	+	238	1	Intergenic	novelGene_6066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGCTCTGTAGAAATGCC	NA	False	NA	NA	False	NA	NA	NA	24805821	24806059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24805800_24806100
ES.7364.1	chr12	-	178	1	Intergenic	novelGene_6067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTCTACAC	NA	False	NA	NA	False	NA	NA	NA	24808000	24807822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24807800_24808000
ES.7365.1	chr12	+	162	1	Intergenic	novelGene_6068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	5581	False	NA	NA	False	NA	NA	NA	24837201	24837363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24837200_24837400
ES.7366.1	chr12	+	177	1	Intergenic	novelGene_6069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGGCAAGAATT	7855	False	NA	NA	False	NA	NA	NA	24839475	24839652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24839500_24839700
ES.7367.1	chr12	+	174	1	Intergenic	novelGene_6070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGAAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	24847735	24847909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24847700_24847900
ES.7368.1	chr12	+	195	1	Intergenic	novelGene_6071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATCATTGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	24854218	24854413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24854200_24854400
ES.7369.1	chr12	-	109	1	Intergenic	novelGene_6072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	24874537	24874428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24874400_24874500
ES.737.1	chr1	-	1934	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	-118	1	-118	-1	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTGCATTTTGT	NA	False	NA	0	True	AATAAA	-18	NA	74324015	74318999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.10	chr1	-	3717	5	FSM	ENSMUSG00000006299.14	ENSMUST00000191258.2	1001	5	-1499	-1217	39	-3	multi-exon	FALSE	canonical	3	1233	junction_4	20.2669681995112	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGTGTGCATTTT	NA	False	NA	-2	True	AATAAA	-16	NA	74323800	74319001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.11	chr1	-	4864	1	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-26	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	668	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGTGTGCATTTT	NA	False	NA	-2	True	AATAAA	-16	NA	74323865	74319001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319000_74323900
ES.737.12	chr1	-	1755	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-11	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	386.636314900709	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323850	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320258_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.13	chr1	-	1779	11	NNC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	499.601240991253	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323853	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319476_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
ES.737.14	chr1	-	3584	6	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-18	2	intron_retention	FALSE	canonical	1	1	junction_3	513.839897244268	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323857	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320685_74320802_74320894_74320979_74321185
ES.737.15	chr1	-	1923	10	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-19	2	intron_retention	FALSE	canonical	3	1233	junction_7	53.3036954686754	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323858	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.17	chr1	-	4575	3	NIC	ENSMUSG00000006299.14	novel	2762	6	NA	NA	20	2	intron_retention	FALSE	canonical	3	1283	junction_2	5.5	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323819	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320339_74320487_74320802_74320894
ES.737.18	chr1	-	1703	11	NNC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	501.391463828414	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTGTCTGTGTGCATTT	NA	False	NA	-3	True	AATAAA	-15	NA	74323832	74319002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322325_74323044_74323204_74323661
ES.737.19	chr1	-	4077	3	NIC	ENSMUSG00000006299.14	novel	1001	5	NA	NA	-23	1	intron_retention	FALSE	canonical	3	1233	junction_2	19	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTCTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-14	NA	74323862	74319003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74321331_74321569_74321710_74322252
ES.737.20	chr1	-	3353	8	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	7	1	intron_retention	FALSE	canonical	3	1233	junction_7	56.1015842477023	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTCTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-14	NA	74323832	74319003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.21	chr1	-	1785	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-25	1	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_3	380.706711262095	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTCTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-14	NA	74323864	74319003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320481_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.22	chr1	-	3346	6	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-9	1	intron_retention	FALSE	canonical	3	1233	junction_5	29.2205407205274	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGTGTCTGTGTGCATT	NA	False	NA	-4	True	AATAAA	-14	NA	74323848	74319003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320802_74320894_74321331_74321569_74321710_74322252
ES.737.23	chr1	-	3509	5	NIC	ENSMUSG00000006299.14	novel	2762	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	1233	junction_4	32.8052968284087	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323829	74319004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74321710_74322252
ES.737.24	chr1	-	4073	4	ISM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	-11	0	-11	0	intron_retention	FALSE	canonical	3	1286	junction_1	16.3571255285137	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323850	74319004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487
ES.737.25	chr1	-	3479	5	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	1233	junction_4	21.1113121335458	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323831	74319004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320802_74320894_74321331_74321569_74321710_74322252
ES.737.26	chr1	-	3662	6	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	1233	junction_5	64.7876531447158	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323842	74319004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.27	chr1	-	3028	8	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	1233	junction_7	56.1801039660185	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323832	74319004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.28	chr1	-	1751	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	389.60318273854	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323823	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320994_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.3	chr1	-	1712	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	386.951792863142	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTGCATTTTGT	NA	False	NA	0	True	AATAAA	-18	NA	74323833	74318999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320527_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.31	chr1	-	4220	3	NIC	ENSMUSG00000006299.14	novel	1001	5	NA	NA	-22	-1	intron_retention	FALSE	canonical	3	1233	junction_2	25	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323861	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320802_74320894_74321710_74322252
ES.737.32	chr1	-	3116	8	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-24	-1	intron_retention	FALSE	canonical	3	1233	junction_7	52.3637201091889	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323863	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74321331_74321569_74321710_74322252
ES.737.33	chr1	-	4228	3	ISM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	-18	1	-18	-1	intron_retention	FALSE	canonical	3	1286	junction_1	19	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323857	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74319469_74319941_74320097_74320247
ES.737.34	chr1	-	3817	5	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	1233	junction_4	32.460552983583	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323848	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320802_74320894_74321331_74321569_74321710_74322252
ES.737.35	chr1	-	2878	9	ISM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	7	1	7	-1	intron_retention	FALSE	canonical	3	1233	junction_8	52.5522061858491	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323832	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.37	chr1	-	3147	8	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-23	-1	intron_retention	FALSE	canonical	3	1233	junction_7	55.4484500436658	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323862	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321710_74322252
ES.737.38	chr1	-	2251	10	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-26	-1	intron_retention	FALSE	canonical	3	1233	junction_7	53.416601664027	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323865	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.39	chr1	-	2883	7	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	1233	junction_5	29.4359002278208	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323848	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320802_74320894_74321331_74321569_74321710_74322252_74323201_74323661
ES.737.4	chr1	-	3529	7	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	1233	junction_6	59.176994403794	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTGCATTTTGT	NA	False	NA	0	True	AATAAA	-18	NA	74323853	74318999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.40	chr1	-	2416	10	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	8	-1	intron_retention	FALSE	canonical	3	1233	junction_8	51.7353187858792	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	False	NA	-6	True	AATAAA	-12	NA	74323831	74319005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74323201_74323661
ES.737.41	chr1	-	1432	12	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	496.337212083855	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCAGTGTCTGTGTGC	NA	False	NA	-7	True	AATAAA	-11	NA	74323865	74319006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319109_74319413_74319469_74319941_74320097_74320247_74320339_74320527_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.42	chr1	-	3500	7	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	6	-2	intron_retention	FALSE	canonical	3	1233	junction_6	60.5963420238109	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCAGTGTCTGTGTGC	NA	False	NA	-7	True	AATAAA	-11	NA	74323833	74319006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.43	chr1	-	3767	6	NIC	ENSMUSG00000006299.14	novel	1756	11	NA	NA	16	-2	intron_retention	FALSE	canonical	3	1271	junction_5	51.9330338031585	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCAGTGTCTGTGTGC	NA	False	NA	-7	True	AATAAA	-11	NA	74323823	74319006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320592_74320685_74320802_74320894_74321331_74321569
ES.737.45	chr1	-	2511	8	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	14	-2	intron_retention	FALSE	canonical	3	1233	junction_5	29.421635798528	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCAGTGTCTGTGTGC	NA	False	NA	-7	True	AATAAA	-11	NA	74323883	74319006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.737.46	chr1	-	3144	7	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	1233	junction_6	29.9258342499513	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGCAGTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-10	NA	74323857	74319007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.47	chr1	-	4756	2	ISM	ENSMUSG00000006299.14	ENSMUST00000191258.2	1001	5	-1555	-1211	-17	-3	intron_retention	FALSE	canonical	3	1283	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGCAGTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-10	NA	74323856	74319007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74320802_74320894
ES.737.48	chr1	-	4283	2	NIC	ENSMUSG00000006299.14	novel	1001	5	NA	NA	6	-3	intron_retention	FALSE	canonical	3	1233	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGGCAGTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-10	NA	74323833	74319007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74321710_74322252
ES.737.49	chr1	-	3616	6	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-18	-4	intron_retention	FALSE	canonical	3	1233	junction_5	32.1894392619691	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTGGCAGTGTCTGTGT	NA	False	NA	-9	True	AATAAA	-9	NA	74323857	74319008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74320097_74320247_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252
ES.737.7	chr1	-	1781	11	NNC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	27	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	389.803078489639	668	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGTGTGCATTTT	NA	False	NA	-2	True	AATAAA	-16	NA	74323870	74319001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322258_74322373_74323044_74323201_74323661
ES.737.8	chr1	-	1674	10	NIC	ENSMUSG00000006299.14	novel	1817	11	NA	NA	-22	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	398.614390230415	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCTGTGTGCATTTT	NA	False	NA	-2	True	AATAAA	-16	NA	74323861	74319001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74319469_74319941_74320097_74320247_74320339_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ES.7370.1	chr12	+	2903	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-121	-431	-107	0	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881500	25010304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.10	chr12	+	3758	4	NNC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-34	-25160	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.8721200141548	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGAGTTGGGAGACTC	NA	False	NA	NA	False	ATTAAA	-14	NA	24881573	24951704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24948370
ES.7370.11	chr12	+	6518	14	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.297648787579	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGAACCTGTGTTTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	24881573	25014390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933_25011938_25012335
ES.7370.12	chr12	+	2726	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-34	4100	-34	-8	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGTGTTAGATTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24881573	25010296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.13	chr12	+	3101	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-48	-702	-34	271	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGAGTTTGGTTTTGT	NA	False	NA	NA	False	AATGAA	-17	NA	24881573	25010575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.14	chr12	+	1832	10	NIC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-29	-332	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	47.5186772896513	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCCCGGATGGTATTTC	NA	False	NA	51	True	AATGAA	-28	NA	24881578	25009541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.15	chr12	+	6824	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-29	-3	-29	3	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTGTGTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	24881578	25014399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.16	chr12	+	2950	14	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.8595932430851	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881579	25010304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877_24905004_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.17	chr12	+	3916	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-42	-1523	-28	1092	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTGCACTACTGTTA	NA	False	NA	NA	False	TTTAAA	-3	NA	24881579	25011396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.18	chr12	+	11608	10	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-27	3	intron_retention	FALSE	canonical	3	86	junction_3	28.0832096931007	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTGTGTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	24881580	25014399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24998380_25001384_25001489_25004184_25007724_25008933
ES.7370.19	chr12	+	6914	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-39	-4524	-25	1	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTTTGTGTTTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	24881582	25014397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.2	chr12	+	2177	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-112	286	-98	-286	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATTCGATATGGTGT	NA	False	NA	97	True	NA	NA	NA	24881509	25009587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.20	chr12	+	6679	11	NNC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-24	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	54.9313207560131	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAACCTGTGTTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	24881583	25014391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877_24904970_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.21	chr12	+	6683	11	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-24	-5	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	41.3908202383089	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAACCTGTGTTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	24881583	25014391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.22	chr12	+	4934	12	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-24	-30	intron_retention	FALSE	canonical	3	86	junction_3	26.4543892528972	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACTTCATGCATTAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	24881583	25010255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25007724_25008933
ES.7370.23	chr12	+	987	4	NNC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-23	-27920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	79.8721200141548	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACTTTTGGTTACTGT	NA	False	NA	NA	False	AATAAA	-19	NA	24881584	24948944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24948370
ES.7370.24	chr12	+	5248	12	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-20	269	intron_retention	FALSE	canonical	3	86	junction_3	26.4543892528972	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGGTGAGTTTGGTTTT	NA	False	NA	NA	False	AATGAA	-15	NA	24881587	25010573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25007724_25008933
ES.7370.25	chr12	+	2642	12	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41.8381375310388	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTGTTAAAATGGGT	NA	False	NA	NA	False	ATTAAA	-12	NA	24881596	25010285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.26	chr12	+	6612	10	FSM	ENSMUSG00000020646.18	ENSMUST00000222994.2	2475	10	-31	-4106	-9	-5	multi-exon	FALSE	canonical	1	3	junction_2	56.7328589439191	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAACCTGTGTTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	24881598	25014391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24974197_24974294_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.28	chr12	+	3167	2	NNC	ENSMUSG00000020646.18	novel	2827	2	NA	NA	-7	-68993	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	AATAAA	-38	NA	24881600	24907871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877
ES.7370.29	chr12	+	1871	10	FSM	ENSMUSG00000020646.18	ENSMUST00000078902.8	2467	10	-16	612	-7	-181	multi-exon	FALSE	canonical	0	0	junction_1	44.1864735461481	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTTTTCTTAAGGTATC	NA	False	NA	8	True	AATAAA	-15	NA	24881600	25009692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.3	chr12	+	4137	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-85	2740	-85	1352	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTGATTTGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	24881522	25011656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.30	chr12	+	3994	8	NIC	ENSMUSG00000020646.18	novel	2467	10	NA	NA	-7	-165	intron_retention	FALSE	canonical	1	5	junction_1	47.82365566136	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTAGAGGACTGTGTGC	NA	False	NA	24	True	AATAAA	-31	NA	24881600	25009708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25007724_25008933
ES.7370.31	chr12	+	2558	11	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	41.3908202383089	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGTGTTAGATTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24881613	25010296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.32	chr12	+	1821	4	NNC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	0	-13616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.3423231484433	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATGAAAATCCAT	NA	False	NA	NA	False	NA	NA	NA	24881613	24963248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24961811
ES.7370.33	chr12	+	2660	11	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.158073051151	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTGTTAAAATGGGT	NA	False	NA	NA	False	ATTAAA	-12	NA	24881613	25010285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.34	chr12	+	1938	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	2	411	2	-411	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGTGGAAAATAATCAT	NA	False	NA	-28	True	NA	NA	NA	24881623	25009462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.35	chr12	+	6981	14	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	53.6993603479143	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAACCTGTGTTTGTG	NA	False	NA	NA	False	ATTAAA	-9	NA	24881625	25014391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24948370_24948487_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.36	chr12	+	2349	9	NIC	ENSMUSG00000020646.18	novel	2467	10	NA	NA	3	-27	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	45.2493093869951	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCATGCATTAAAATTC	NA	False	NA	NA	False	ATTAAA	-19	NA	24881632	25010258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.37	chr12	+	2280	14	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	7	-182	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.8595932430851	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTTTTCTTAAGGTAT	NA	False	NA	7	True	AATAAA	-14	NA	24881636	25009691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877_24905004_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.38	chr12	+	2113	14	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	18	-338	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.8595932430851	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGTTCCCGGATGG	NA	False	NA	45	True	AATGAA	-22	NA	24881647	25009535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877_24905004_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.39	chr12	+	2408	10	FSM	ENSMUSG00000020646.18	ENSMUST00000078902.8	2467	10	51	8	38	-8	multi-exon	FALSE	canonical	0	0	junction_1	44.1864735461481	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGTGTTAGATTCTA	NA	False	NA	NA	False	ATTAAA	-23	NA	24881667	25010296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.4	chr12	+	799	4	NNC	ENSMUSG00000020646.18	novel	6792	12	NA	NA	-56	-16395	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	79.4019311268099	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTGTCTTCTTCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	24881551	24960469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24928189_24928336_24932715_24932794_24960116
ES.7370.40	chr12	+	168	1	Intergenic	novelGene_6074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	24952071	24952239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24952100_24952200
ES.7370.41	chr12	+	1849	1	Intergenic	novelGene_6075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	24960368	24962217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24960400_24962200
ES.7370.42	chr12	+	2763	1	Intergenic	novelGene_6077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTGTGTAGCCCTG	2021	False	NA	NA	False	NA	NA	NA	24991784	24994547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_24991800_24994500
ES.7370.43	chr12	+	175	1	Intergenic	novelGene_6078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	25003845	25004020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_25003800_25004000
ES.7370.5	chr12	+	1981	12	NIC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-38	-366	combination_of_known_junctions	TRUE	canonical	1	3	junction_4	45.2751003394118	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATGTCTTGCCTTAA	NA	False	NA	17	True	NA	NA	NA	24881569	25009507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.6	chr12	+	2221	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-51	181	-37	-181	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTTTTCTTAAGGTATC	NA	False	NA	8	True	AATAAA	-15	NA	24881570	25009692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.7	chr12	+	4135	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	-48	-1736	-34	1305	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATCTCATTTTCTTGAA	NA	False	NA	NA	False	AATAGA	-19	NA	24881573	25011609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.8	chr12	+	2015	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	-34	4811	-34	-288	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTATTCGATATGGT	NA	False	NA	95	True	NA	NA	NA	24881573	25009585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ES.7370.9	chr12	+	6653	15	NNC	ENSMUSG00000020646.18	novel	2351	13	NA	NA	-34	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	56.6876511765867	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTGTGTTTGCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	24881573	25014399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_24881774_24904877_24905004_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933_25011938_25012335
ES.7371.1	chr12	-	1915	1	Intergenic	novelGene_6073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24938048	24936133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24936100_24938000
ES.7372.1	chr12	-	173	1	Intergenic	novelGene_6076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGGAAGGAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	24965992	24965819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_24965800_24966000
ES.7373.1	chr12	+	7139	29	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-9	-156	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.28017055922134	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGTTTTGTCC	NA	False	NA	73	True	ATTAAA	-14	NA	25024914	25109540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.10	chr12	+	7147	29	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	1	-159	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.0339804463211	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTGTGTGTCTGTTTTG	NA	False	NA	70	True	ATTAAA	-11	NA	25024928	25109537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025087_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.11	chr12	+	4857	23	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	3	19105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	14.5352236746714	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCGTCTCGGTCTCTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	25024930	25068585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25055880_25056029_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888
ES.7373.12	chr12	+	8367	29	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.619429464124	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCACGGAGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	25024931	25109470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040671_25040774_25042208_25042308_25043498_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.13	chr12	+	6996	29	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5389203859577	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	25024931	25109471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025005_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.15	chr12	+	5098	28	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	937	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.40063359031882	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTACAGTGTGCTCAG	NA	False	NA	NA	False	ATTAAA	-19	NA	25024931	25104969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796
ES.7373.16	chr12	+	7092	30	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.667009846527	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCACGGAGTTT	NA	False	NA	2	True	AATAAA	-12	NA	25024931	25109469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25027442_25027484_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.17	chr12	+	6938	28	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	-226	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	11.3298227436232	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCACGGAGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	25024931	25109470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.18	chr12	+	4521	21	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	4	19096	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	12.282100797502	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCAGTCTGTCCGTCTCG	NA	False	NA	NA	False	AATAAA	-16	NA	25024931	25068576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888
ES.7373.19	chr12	+	8916	28	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	5	-226	intron_retention	FALSE	canonical	0	0	junction_22	11.6845835379537	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTCACGGAGTTTT	NA	False	NA	3	True	AATAAA	-13	NA	25024932	25109470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067012_25086452_25086632_25088322_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.20	chr12	+	6884	28	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-5316	-228	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.0532008958237	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGACTCACGGAGTT	NA	False	NA	1	True	AATAAA	-11	NA	25036900	25109468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25043498_25043602_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.21	chr12	+	7605	24	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-1514	-390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	14.4249573685701	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCAATATCATGTGATG	604	False	NA	NA	False	ATTAAA	-22	NA	25040702	25109306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25040774_25042208_25042308_25043498_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066887_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.22	chr12	+	5890	19	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	6969	-228	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	8.44298232956128	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGACTCACGGAGTT	6593	False	NA	1	True	AATAAA	-11	NA	25049257	25109468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.24	chr12	+	4950	13	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-8584	-227	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	7.44237118725537	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCACGGAGTTT	NA	False	NA	2	True	AATAAA	-12	NA	25058400	25109469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.25	chr12	+	177	1	Intergenic	novelGene_6079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	25071363	25071540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_25071400_25071500
ES.7373.26	chr12	+	1630	1	Intergenic	novelGene_6080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACATCTCTTAAGGACAG	NA	False	NA	NA	False	NA	NA	NA	25092964	25094594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_25093000_25094600
ES.7373.27	chr12	+	4787	1	NIC	ENSMUSG00000036333.12	novel	7409	32	NA	NA	-8315	-2024	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCAGTATGAATTC	NA	False	NA	NA	False	NA	NA	NA	25094375	25099162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25094400_25099200
ES.7373.28	chr12	+	4614	5	NNC	ENSMUSG00000036333.12	novel	627	4	NA	NA	-3096	-228	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.1719153597401	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGACTCACGGAGTT	582	False	NA	1	True	AATAAA	-11	NA	25099594	25109468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25099756_25099996_25101226_25102795_25102895_25103796_25104034_25106580
ES.7373.29	chr12	+	5183	3	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-1851	-225	intron_retention	FALSE	canonical	3	47	junction_2	2.5	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACTCACGGAGTTTTA	1008	False	NA	4	True	AATAAA	-14	NA	25100839	25109471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_25102895_25103796_25104034_25106580
ES.7373.3	chr12	+	2980	20	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-2	14390	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	11.914515460998	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTAGGCAGTGGTGGCC	NA	False	NA	NA	False	AATAAA	-26	NA	25024921	25063870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058541_25061072_25061138_25061498_25061588_25063295
ES.7373.5	chr12	+	8967	28	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-2	-228	intron_retention	FALSE	non_canonical	0	0	junction_27	11.6401226547825	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGACTCACGGAGTT	NA	False	NA	1	True	AATAAA	-11	NA	25024925	25109468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106574
ES.7373.6	chr12	+	4656	22	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	-2	19101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6647584531439	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTCCGTCTCGGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	25024925	25068581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025005_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040671_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888
ES.7373.8	chr12	+	7037	28	NNC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	0	-156	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	13.4062819253411	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTCTGTTTTGTCC	NA	False	NA	73	True	ATTAAA	-14	NA	25024927	25109540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_25025087_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ES.7374.1	chr12	-	208	1	Intergenic	novelGene_6081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATAATA	1229	False	NA	NA	False	NA	NA	NA	25099981	25099773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_25099800_25100000
ES.7375.1	chr12	-	172	1	Intergenic	novelGene_6082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	25138996	25138824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_25138800_25139000
ES.7376.1	chr12	+	213	1	Intergenic	novelGene_6083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGTGTCTCTAACTTG	NA	False	NA	NA	False	NA	NA	NA	25195718	25195931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_25195700_25195900
ES.7377.1	chr12	+	177	1	Intergenic	novelGene_6084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGGCTGCTCATG	NA	False	NA	NA	False	NA	NA	NA	25787553	25787730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_25787600_25787700
ES.7378.1	chr12	-	5134	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-81	-241	-43	1	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCATCTTTTGTA	8791	False	NA	0	True	AATACA	-22	NA	26465296	26356791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
ES.7378.10	chr12	-	5303	3	ISM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-41	27454	-3	-13425	5prime_fragment	FALSE	canonical	3	23	junction_2	13	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGCCTCTGTTTCCA	8831	False	NA	NA	False	TATAAA	-19	NA	26465256	26384486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_26389451_26439392_26439575_26465099
ES.7378.2	chr12	-	5170	10	FSM	ENSMUSG00000020642.14	ENSMUST00000020971.14	5164	10	-13	7	-13	-7	multi-exon	FALSE	canonical	3	6	junction_8	13.9133118599987	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCCTGCCTGGCTCCAT	8821	False	NA	-8	True	AATACA	-14	NA	26465266	26356799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26455317_26455392_26465099
ES.7378.3	chr12	-	5157	10	NIC	ENSMUSG00000020642.14	novel	5164	10	NA	NA	-8	-9	intron_retention	FALSE	canonical	0	0	junction_8	16.7228682045771	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAACCCTGCCTGGCTCC	8826	False	NA	-10	True	AATACA	-12	NA	26465261	26356801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26463762_26463831_26465099
ES.7378.4	chr12	-	4991	8	NIC	ENSMUSG00000020642.14	novel	4812	9	NA	NA	-15	-9	intron_retention	FALSE	canonical	0	0	junction_5	15.1886101257166	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAACCCTGCCTGGCTCC	8819	False	NA	-10	True	AATACA	-12	NA	26465268	26356801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26389304_26389451_26439392_26439575_26465099
ES.7378.6	chr12	-	3450	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-76	1438	-38	-1043	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAACACCAGTAAGATC	8796	False	NA	NA	False	AATAAA	-21	NA	26465291	26358470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
ES.7378.7	chr12	-	1882	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-49	2979	-11	-2584	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTATGCACACTCTG	8823	False	NA	NA	False	TATAAA	-38	NA	26465264	26360011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
ES.7378.8	chr12	-	1410	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	-118	3520	-80	-3125	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCAGTGTCCGGCTTGC	8754	False	NA	NA	False	ACTAAA	-29	NA	26465333	26360552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
ES.7378.9	chr12	-	1089	8	NIC	ENSMUSG00000020642.14	novel	4812	9	NA	NA	8	-3138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	13.4528655622783	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCCCATTGAGCTTCA	8880	False	NA	NA	False	ACTAAA	-16	NA	26465207	26360565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26465099
ES.7379.1	chr12	-	3798	6	FSM	ENSMUSG00000020641.17	ENSMUST00000020970.10	3782	6	-18	2	-18	-2	multi-exon	FALSE	canonical	0	0	junction_5	1.01980390271856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGTGTTAGTATCTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	26506469	26492746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_26495570_26497150_26497184_26498581_26498732_26500544_26500775_26504016_26504179_26506069
ES.738.1	chr1	-	3265	13	Fusion	ENSMUSG00000103013.2_ENSMUSG00000006301.18	novel	2378	12	NA	NA	-45	-146	multi-exon	FALSE	canonical	0	0	junction_11	48.8054527918984	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAATTTTAACCAGTACG	NA	False	NA	NA	False	NA	NA	NA	74344826	74326846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281_74343529_74344462
ES.738.11	chr1	-	1431	12	NNC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	-35	352	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8406364690682	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCAGTGCTCATAGGCC	NA	False	NA	NA	False	AATAAA	-19	NA	74343314	74328106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343277
ES.738.12	chr1	-	931	1	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	40	-9318	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAGGGAAATGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	74343334	74342403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74342400_74343300
ES.738.13	chr1	-	473	1	Antisense	novelGene_ENSMUSG00000103403.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	74347265	74346792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74346800_74347300
ES.738.2	chr1	-	2168	12	NNC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	-4312	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	38.5731032912917	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTTGAGTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-19	NA	74349093	74327408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74349017
ES.738.3	chr1	-	2375	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	-1	4	-1	0	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCTTGAGTTGCTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	74343565	74327409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
ES.738.4	chr1	-	2246	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	37.2398968494191	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCTTGAGTTGCTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	74344826	74327409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74344671
ES.738.7	chr1	-	2333	12	NNC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8406364690682	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCTTGAGTTGCTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	74343526	74327409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334592_74343277
ES.738.8	chr1	-	2192	12	NNC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	526	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	38.8406364690682	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCTTGAGTTGCTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	74342753	74327409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74342652
ES.738.9	chr1	-	2408	12	NIC	ENSMUSG00000006301.18	novel	2378	12	NA	NA	28	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	38.0389100486062	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCCTTGAGTTGCTGT	NA	False	NA	-11	True	AATAAA	-17	NA	74343251	74327410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74342933
ES.7380.1	chr12	+	3206	5	FSM	ENSMUSG00000020638.9	ENSMUST00000020969.5	3200	5	-6	0	-6	0	multi-exon	FALSE	canonical	2	4	junction_3	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCGTCATCATTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	26519196	26529836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_26520026_26521404_26521520_26523994_26524197_26527004_26527239_26528010
ES.7380.2	chr12	+	2749	5	FSM	ENSMUSG00000020638.9	ENSMUST00000020969.5	3200	5	10	441	10	-441	multi-exon	FALSE	canonical	2	4	junction_3	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGGCTGGACCAGA	NA	False	NA	NA	False	AATAAA	-25	NA	26519212	26529395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_26520026_26521404_26521520_26523994_26524197_26527004_26527239_26528010
ES.7381.1	chr12	+	176	1	Intergenic	novelGene_6085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGGCCTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	26682817	26682993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_26682800_26683000
ES.7382.1	chr12	+	178	1	Intergenic	novelGene_6086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTTTAAAGAG	NA	False	NA	NA	False	NA	NA	NA	27123677	27123855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_27123700_27123900
ES.7383.1	chr12	-	2548	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	3673	2090	3673	-2090	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAAACAAAGCAATAGGA	NA	False	NA	NA	False	NA	NA	NA	27388900	27386352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_27386400_27388900
ES.7384.1	chr12	-	2920	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	-145	5536	-145	-5536	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGCGAAGCAGACTCAA	NA	False	NA	NA	False	AATAAA	-27	NA	27392718	27389798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_27389800_27392700
ES.7384.2	chr12	-	984	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	586	6741	586	-6741	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCCCGTCCTTTATCG	NA	False	NA	NA	False	TTTAAA	-19	NA	27391987	27391003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_27391000_27392000
ES.7385.1	chr12	-	2722	10	NNC	ENSMUSG00000020636.15	novel	1384	12	NA	NA	10252	0	intron_retention	FALSE	canonical	0	0	junction_9	2.45452467048606	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTTGATCTCCTGTTG	9385	False	NA	NA	False	AATAAA	-17	NA	28622262	28603753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28605388_28607340_28607450_28609237_28609312_28609868_28610025_28613369_28613503_28614233_28614314_28615395_28615525_28618000_28618089_28620608_28620660_28621994
ES.7385.2	chr12	-	1660	12	NNC	ENSMUSG00000020636.15	novel	1500	12	NA	NA	8728	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2.63165724111457	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGTCTTGATCTCCTG	7861	False	NA	NA	False	AATAAA	-14	NA	28623786	28603756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28604047_28605262_28605388_28607340_28607450_28609237_28609312_28609868_28610025_28613369_28613503_28614233_28614314_28615395_28615525_28618000_28618089_28620608_28620660_28623175_28623379_28623564
ES.7385.3	chr12	-	1628	13	NNC	ENSMUSG00000020636.15	novel	1384	12	NA	NA	6902	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	2.83823106098773	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGTCTTGATCTCCTG	9624	False	NA	NA	False	AATAAA	-14	NA	28625612	28603756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28604047_28605262_28605388_28607340_28607450_28609237_28609312_28609868_28610025_28613369_28613503_28614233_28614314_28615395_28615525_28618000_28618089_28620608_28620660_28623175_28623271_28625252_28625322_28625383
ES.7385.4	chr12	-	1768	13	NNC	ENSMUSG00000020636.15	novel	1500	12	NA	NA	6867	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2.62995563967658	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAACTGGTCTTGATCTC	9589	False	NA	NA	False	AATAAA	-11	NA	28625647	28603759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28604047_28605262_28605388_28607340_28607450_28609237_28609312_28609868_28610025_28613369_28613503_28614233_28614314_28615395_28615525_28618000_28618089_28620608_28620660_28623175_28623379_28625252_28625322_28625383
ES.7386.1	chr12	-	2856	1	Intergenic	novelGene_6087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGTGGTCGTGGTGTTT	NA	False	NA	NA	False	NA	NA	NA	28680119	28677263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_28677300_28680100
ES.7387.1	chr12	-	1010	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	32	-88	32	88	multi-exon	TRUE	canonical	3	10789	junction_4	2567.89392736971	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTTCATCATTCCTG	NA	False	NA	81	True	NA	NA	NA	28685920	28680764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ES.7387.10	chr12	-	746	8	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6996.89028593913	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685898	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685127_28685204_28685414_28685487_28685578_28685663_28685854
ES.7387.12	chr12	-	2818	5	NIC	ENSMUSG00000061477.5	novel	820	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	10789	junction_3	2707.87798608061	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685861	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28683832_28684207_28684352_28685414_28685487_28685578
ES.7387.14	chr12	-	641	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	3	1048	junction_2	5002.98581249238	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685934	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28681774_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ES.7387.15	chr12	-	2483	1	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	342	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	940	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28683565	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681100_28683600
ES.7387.16	chr12	-	1756	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	30	-1	intron_retention	FALSE	canonical	3	12102	junction_5	2256.80290676878	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGTAGTAACTTG	NA	False	NA	-12	True	AATAAA	-14	NA	28685922	28681083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28685487_28685578_28685663_28685854
ES.7387.18	chr12	-	3052	5	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	10789	junction_2	1924.01979914449	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGTAGTAACTTG	NA	False	NA	-12	True	AATAAA	-14	NA	28685912	28681083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28684352_28685414_28685487_28685578_28685663_28685854
ES.7387.3	chr12	-	730	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	-4	228	-4	1	multi-exon	FALSE	canonical	3	10789	junction_4	2567.89392736971	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGTAGTAACTTGTCA	NA	False	NA	-9	True	AATAAA	-17	NA	28685956	28681080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ES.7387.4	chr12	-	3739	4	NIC	ENSMUSG00000061477.5	novel	820	6	NA	NA	-23	0	intron_retention	FALSE	canonical	3	12310	junction_1	2183.44091338012	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28685718	28681081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28683832_28684207_28685487_28685578
ES.7387.5	chr12	-	762	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-21	0	intron_retention	FALSE	canonical	3	10789	junction_4	2678.95028695943	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685898	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685663_28685854
ES.7387.6	chr12	-	725	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5471.63235850753	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685939	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28681193_28681622_28681774_28683766_28683846_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ES.7387.7	chr12	-	651	7	NNC	ENSMUSG00000061477.5	novel	954	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5955.20349498375	941	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685909	28681082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28681163_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ES.7388.1	chr12	+	314	1	Intergenic	novelGene_6088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	28689697	28690011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28689700_28690000
ES.7389.1	chr12	+	174	1	Intergenic	novelGene_6089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	28694221	28694395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28694200_28694400
ES.739.1	chr1	+	1875	10	NNC	ENSMUSG00000073650.9	novel	2101	10	NA	NA	78	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.63299316185545	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTGTGTTGGCTCAA	4780	False	NA	NA	False	AATAAA	-13	NA	74401344	74408479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74401387_74401525_74401682_74401959_74402107_74402410_74402467_74403475_74403563_74403707_74403876_74405775_74405901_74406945_74407023_74407292_74407382_74407551
ES.739.10	chr1	+	2118	14	NNC	ENSMUSG00000026177.12	novel	604	4	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.6190278859903	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	6374	False	NA	NA	False	NA	NA	NA	74415764	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74415821_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.11	chr1	+	2106	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1546	0	92	0	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	6517	False	NA	NA	False	NA	NA	NA	74415907	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.12	chr1	+	979	4	NIC	ENSMUSG00000026177.12	novel	2315	15	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.8859335970941	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAG	4371	False	NA	NA	False	NA	NA	NA	74422808	74425211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74422904_74423182_74423333_74423855_74423930_74424551
ES.739.13	chr1	+	1933	3	NIC	ENSMUSG00000026177.12	novel	2726	12	NA	NA	51	0	intron_retention	FALSE	canonical	3	41	junction_2	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCTTAAAGA	4372	False	NA	NA	False	NA	NA	NA	74422809	74425210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74423930_74424299_74424454_74424551
ES.739.14	chr1	+	973	4	NIC	ENSMUSG00000026177.12	novel	2584	14	NA	NA	60	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	19.8158185969358	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAG	4381	False	NA	NA	False	NA	NA	NA	74422818	74425211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74422904_74423855_74423930_74424299_74424454_74424551
ES.739.2	chr1	+	4106	4	NIC	ENSMUSG00000073650.9	novel	1866	8	NA	NA	467	17	intron_retention	FALSE	canonical	1	1	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTATAATCTCAGCCC	5503	False	NA	NA	False	AATAAA	-31	NA	74402067	74408497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74402467_74403475_74405901_74406945_74407023_74407292
ES.739.3	chr1	+	2825	5	NNC	ENSMUSG00000073650.9	novel	2101	10	NA	NA	298	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.87082869338697	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTGTGTTGGCTCAA	7423	False	NA	NA	False	AATAAA	-13	NA	74403987	74408479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74404534_74404715_74405901_74406945_74407023_74407292_74407382_74407551
ES.739.4	chr1	+	6551	15	Fusion	ENSMUSG00000026177.12_ENSMUSG00000073650.9	novel	2315	15	NA	NA	3873	0	intron_retention	FALSE	canonical	1	1	junction_1	14.7343829465752	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	NA	False	NA	NA	False	NA	NA	NA	74407562	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_74408902_74411860_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.5	chr1	+	2735	17	NNC	ENSMUSG00000026177.12	novel	604	4	NA	NA	-3997	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4412950800767	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	966	False	NA	NA	False	NA	NA	NA	74410356	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74410541_74411860_74411930_74413337_74413508_74414760_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.6	chr1	+	2221	15	NNC	ENSMUSG00000026177.12	novel	604	4	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.5525087254426	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4860	False	NA	NA	False	NA	NA	NA	74414250	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74414276_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.7	chr1	+	2342	15	FSM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	-27	0	-19	0	multi-exon	FALSE	canonical	2	3	junction_1	14.5525087254426	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	4944	False	NA	NA	False	NA	NA	NA	74414334	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74414481_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.739.8	chr1	+	2569	13	NNC	ENSMUSG00000026177.12	novel	2315	15	NA	NA	55	0	intron_retention	FALSE	non_canonical	0	0	junction_12	14.4825086071287	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	5395	False	NA	NA	False	NA	NA	NA	74414785	74425221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74423333_74423855_74423930_74424299_74424454_74424548
ES.739.9	chr1	+	2123	13	NIC	ENSMUSG00000026177.12	novel	2315	15	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.1565900591862	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAG	6368	False	NA	NA	False	NA	NA	NA	74415758	74425211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74415953_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ES.7390.1	chr12	+	8365	3	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_1	11.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACACATCTAGTTTGA	NA	False	NA	9	True	AATAAA	-17	NA	28699600	28709584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28702140_28703061_28708295_28708991
ES.7390.10	chr12	+	2919	9	NNC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	119.321453959462	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACATCTAGTTTGAGT	NA	False	NA	11	True	AATAAA	-19	NA	28699631	28709586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28699816_28701872_28701931_28702023_28702140_28703061_28704663_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ES.7390.11	chr12	+	1295	7	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	102.740233382816	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699631	28709588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707635_28707717_28708991
ES.7390.14	chr12	+	5808	5	NIC	ENSMUSG00000020630.10	novel	1368	7	NA	NA	16	1	intron_retention	FALSE	canonical	3	22	junction_3	95.9400854700474	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAACACATCTAGTTTG	NA	False	NA	8	True	AATAAA	-16	NA	28699638	28709583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28707326_28707635_28708295_28708991
ES.7390.15	chr12	+	2157	7	ISM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	1504	2	1482	-2	3prime_fragment	FALSE	canonical	3	155	junction_2	36.7514172062339	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACATCTAGTTTGAGT	NA	False	NA	11	True	AATAAA	-19	NA	28701104	28709586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ES.7390.16	chr12	+	5376	3	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	-53	0	intron_retention	FALSE	canonical	3	247	junction_2	13	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28703062	28709588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28707717_28708169_28708295_28708991
ES.7390.17	chr12	+	2486	3	ISM	ENSMUSG00000020630.10	ENSMUST00000221496.2	1970	6	1553	2	1553	0	intron_retention	FALSE	canonical	3	234	junction_2	6.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAACACATCTAGTTT	NA	False	NA	7	True	AATAAA	-15	NA	28705203	28709582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28705684_28707270_28707326_28707631
ES.7390.2	chr12	+	1449	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	6	0	6	0	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699606	28709588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ES.7390.3	chr12	+	4483	4	ISM	ENSMUSG00000020630.10	ENSMUST00000223322.2	1368	7	-7	-6	-7	0	intron_retention	FALSE	canonical	3	155	junction_3	41.7957998953111	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699615	28709588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583
ES.7390.4	chr12	+	3620	7	NNC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	-7	0	intron_retention	FALSE	canonical	2	4	junction_2	91.063012371776	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699615	28709588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28702140_28703061_28703196_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ES.7390.5	chr12	+	3794	7	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	224	junction_2	15.4775823549919	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699620	28709587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ES.7390.6	chr12	+	6131	4	NIC	ENSMUSG00000020630.10	novel	1368	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	224	junction_2	13.1402688962847	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACACATCTAGTTTGA	NA	False	NA	9	True	AATAAA	-17	NA	28699626	28709584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28708295_28708991
ES.7390.7	chr12	+	3319	6	NIC	ENSMUSG00000020630.10	novel	1368	7	NA	NA	6	-1	intron_retention	FALSE	canonical	3	155	junction_3	41.0385184917779	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACATCTAGTTTGAGTT	NA	False	NA	12	True	AATAAA	-20	NA	28699628	28709587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28707717_28708169_28708295_28708991
ES.7390.8	chr12	+	6822	3	ISM	ENSMUSG00000020630.10	ENSMUST00000223322.2	1368	7	8	0	8	0	intron_retention	FALSE	canonical	3	224	junction_2	15.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAACACATCTAGTTT	NA	False	NA	7	True	AATAAA	-15	NA	28699630	28709582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28699816_28702023_28702140_28703061
ES.7390.9	chr12	+	5239	4	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	8	-2	intron_retention	FALSE	canonical	3	224	junction_2	13.1402688962847	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACATCTAGTTTGAGT	NA	False	NA	11	True	AATAAA	-19	NA	28699630	28709586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28699816_28702023_28702140_28703061_28705684_28707270
ES.7391.1	chr12	-	177	1	Intergenic	novelGene_6090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATATTAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	28712000	28711823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_28711800_28712000
ES.7392.1	chr12	+	180	1	Intergenic	novelGene_6091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTATTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	28719450	28719630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28719400_28719600
ES.7393.1	chr12	+	1700	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-51	3	-51	-3	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTCTCTCGAGAGT	NA	False	NA	12	True	NA	NA	NA	28725178	28732171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ES.7393.2	chr12	+	922	4	NNC	ENSMUSG00000020629.13	novel	1652	4	NA	NA	-2	29119	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	156.044865343272	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGGAATGTCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	28725227	28761293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28725372_28727776_28727897_28729388_28729569_28760815
ES.7393.3	chr12	+	4538	2	ISM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	-2	4	-2	-4	intron_retention	FALSE	canonical	3	346	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTGGTCTCTCGAGAG	NA	False	NA	11	True	NA	NA	NA	28725227	28732170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28725372_28727776
ES.7393.4	chr12	+	3046	3	ISM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	2	0	2	0	intron_retention	FALSE	canonical	3	316	junction_2	15	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28725231	28732174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28725372_28727776_28727897_28729388
ES.7393.5	chr12	+	728	3	NNC	ENSMUSG00000020629.13	novel	1652	4	NA	NA	4	29111	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	172.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATGGCTCTTAGGAATG	NA	False	NA	NA	False	NA	NA	NA	28725233	28761285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28725372_28727776_28727897_28760815
ES.7393.6	chr12	+	6935	1	FSM	ENSMUSG00000098579.3	ENSMUST00000184974.3	65	1	-4087	-2783	-4087	2783	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTCTCTCGAGAGT	NA	False	NA	12	True	NA	NA	NA	28725236	28732171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28725200_28732200
ES.7393.7	chr12	+	153	1	Intergenic	novelGene_6092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	28726790	28726943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28726800_28726900
ES.7393.8	chr12	+	1509	3	ISM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	2545	3	-29	-3	3prime_fragment	FALSE	canonical	3	316	junction_1	1	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGTCTCTCGAGAGT	NA	False	NA	12	True	NA	NA	NA	28727774	28732171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_28727897_28729388_28729569_28730964
ES.7393.9	chr12	+	173	1	Intergenic	novelGene_6093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAGATCAACATTT	NA	False	NA	NA	False	NA	NA	NA	28737065	28737238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28737100_28737200
ES.7394.1	chr12	+	173	1	Intergenic	novelGene_6094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAATATTTT	8612	False	NA	NA	False	NA	NA	NA	28780112	28780285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28780100_28780300
ES.7395.1	chr12	+	4053	1	Intergenic	novelGene_6095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTCTTCTTCCACCA	9589	False	NA	NA	False	NA	NA	NA	28781089	28785142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_28781100_28785100
ES.7396.1	chr12	-	3354	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	33	-10	9	9	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACATGAGCAAATACGTC	8282	False	NA	-20	True	AATAAA	-29	NA	28800419	28740617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.10	chr12	-	2959	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	35	383	11	-383	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTCATTGTCTTCCT	8284	False	NA	-4	True	NA	NA	NA	28800417	28741010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.11	chr12	-	1424	10	NNC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	16237	-389	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.5923673901366	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCACAGTTCATTGT	NA	False	NA	-10	True	NA	NA	NA	28784139	28741016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28784056
ES.7396.12	chr12	-	2667	11	NIC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	-18	-389	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	39.0302446828098	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCACAGTTCATTGT	8302	False	NA	-10	True	NA	NA	NA	28800399	28741016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28741557_28741757_28741846_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ES.7396.15	chr12	-	3253	11	NIC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	17	-563	intron_retention	FALSE	canonical	3	62	junction_10	22.1090479216089	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGTTGCACAATACTGC	8290	False	NA	NA	False	NA	NA	NA	28800411	28741190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_28741557_28741757_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ES.7396.16	chr12	-	2539	12	NNC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	-6	-621	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	34.1772240626429	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGGAGCATGCCTTCGG	8267	False	NA	NA	False	AGTAAA	-15	NA	28800434	28741248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800359
ES.7396.17	chr12	-	4331	6	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	41	18884	17	-6	5prime_fragment	FALSE	canonical	3	61	junction_5	17.3135784862633	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCAGATTGAATGGACTG	8290	False	NA	NA	False	AATAAA	-16	NA	28800411	28759511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.18	chr12	-	4341	5	FSM	ENSMUSG00000020628.17	ENSMUST00000223447.2	4264	5	-2	-75	-2	75	multi-exon	FALSE	canonical	3	61	junction_4	19.3520024803636	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGCTAATGAAGTTGA	8318	False	NA	NA	False	NA	NA	NA	28800383	28768540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.19	chr12	-	176	1	Intergenic	novelGene_6096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	28782674	28782498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_28782500_28782700
ES.7396.2	chr12	-	3224	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	7	-1	1	1	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAGGAGACATGAGCA	8237	False	NA	-28	True	AATAAA	-21	NA	28800464	28740625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ES.7396.20	chr12	-	3719	3	FSM	ENSMUSG00000020628.17	ENSMUST00000221335.2	3718	3	1	-2	1	2	multi-exon	FALSE	canonical	3	62	junction_2	25.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	8237	False	NA	NA	False	NA	NA	NA	28800464	28785504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28787849_28796297_28797536_28800327
ES.7396.21	chr12	-	3832	3	ISM	ENSMUSG00000020628.17	ENSMUST00000223447.2	4264	5	-30	16890	17	1	5prime_fragment	FALSE	canonical	3	61	junction_2	26	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAAAGCC	8290	False	NA	NA	False	NA	NA	NA	28800411	28785505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_28787849_28796297_28797536_28800160
ES.7396.4	chr12	-	3316	12	NNC	ENSMUSG00000020628.17	novel	3377	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	37.8660099659814	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGGAGACATGAG	8281	False	NA	-30	True	AATAAA	-19	NA	28800420	28740627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761974_28771069_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.5	chr12	-	3424	13	NNC	ENSMUSG00000020628.17	novel	3377	12	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.5573132792661	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTGAGGAGACATGA	8329	False	NA	-31	True	AATAAA	-18	NA	28800372	28740628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28798805_28798934_28800160
ES.7396.6	chr12	-	1871	10	NNC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	-24367	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.5923673901366	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCTGAGGAGACATGA	NA	False	NA	-31	True	AATAAA	-18	NA	28775975	28740628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28775833
ES.7396.7	chr12	-	3136	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	59	182	-12	-182	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCGTTCCCAGCTTTCCT	8308	False	NA	NA	False	NA	NA	NA	28800393	28740809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ES.7396.8	chr12	-	2856	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	-5	379	-5	-378	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTGTCTTCCTCCCTC	8225	False	NA	1	True	NA	NA	NA	28800476	28741005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ES.7396.9	chr12	-	2818	12	NNC	ENSMUSG00000020628.17	novel	3230	12	NA	NA	-4	-383	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	34.1772240626429	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTCATTGTCTTCCT	8226	False	NA	-4	True	NA	NA	NA	28800475	28741010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800359
ES.7397.1	chr12	+	1713	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	6	2372	6	2	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCTTTGTTTGTTTTTT	1104	False	NA	9	True	NA	NA	NA	28801807	28917492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.10	chr12	+	4010	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	60	21	2	-21	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAGAAG	1158	False	NA	NA	False	NA	NA	NA	28801861	28919843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.11	chr12	+	1554	8	NNC	ENSMUSG00000036613.9	novel	4091	9	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.000510202997	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGGCTCTTTGTTTGTTT	1166	False	NA	6	True	NA	NA	NA	28801869	28917489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28802004_28810068_28810153_28878706_28878864_28897555_28897656_28909211_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.12	chr12	+	7727	5	NNC	ENSMUSG00000036613.9	novel	753	5	NA	NA	-5366	-3	intron_retention	TRUE	canonical	1	1	junction_1	115.577625429838	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTAGGCTCTTTGTTTGT	3319	False	NA	4	True	NA	NA	NA	28901944	28917487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28903557_28904173_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.13	chr12	+	6292	5	NNC	ENSMUSG00000036613.9	novel	753	5	NA	NA	-3975	36	intron_retention	FALSE	non_canonical	0	0	junction_1	116.005387805912	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCACAGCCTCCTCCTTTC	4710	False	NA	3	True	AATAAA	-12	NA	28903335	28917443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28903546_28904162_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.2	chr12	+	1789	10	FSM	ENSMUSG00000036613.9	ENSMUST00000035657.9	1747	10	-43	1	9	-1	multi-exon	FALSE	canonical	2	6	junction_3	106.926188918072	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGGCTCTTTGTTTGTTT	1107	False	NA	6	True	NA	NA	NA	28801810	28917489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28843853_28843936_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.3	chr12	+	1565	8	NIC	ENSMUSG00000036613.9	novel	4091	9	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	93.3499013477393	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTTGTTTGTTTTTTCT	1121	False	NA	11	True	NA	NA	NA	28801824	28917494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28802004_28810068_28810153_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.4	chr12	+	1640	9	NNC	ENSMUSG00000036613.9	novel	4091	9	NA	NA	-11	37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.720347554031	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGCCTCCTCCTTTCA	1123	False	NA	4	True	AATAAA	-13	NA	28801826	28917444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28802004_28810068_28810153_28816770_28816904_28878712_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.5	chr12	+	1757	10	NNC	ENSMUSG00000036613.9	novel	1747	10	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	107.745699693626	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGGCTCTTTGTTTGTTT	1125	False	NA	6	True	NA	NA	NA	28801828	28917489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28914955_28915024_28916919
ES.7397.6	chr12	+	1745	10	NNC	ENSMUSG00000036613.9	novel	1747	10	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	108.914962864624	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGGCTCTTTGTTTGTTT	1126	False	NA	6	True	NA	NA	NA	28801829	28917489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_28802004_28810068_28810153_28812916_28812974_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ES.7397.7	chr12	+	3774	7	NIC	ENSMUSG00000036613.9	novel	4091	9	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.071269221477	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACTTGTCTAGCCTCTT	1126	False	NA	NA	False	ATTAAA	-24	NA	28801829	28919869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_28802004_28810068_28810153_28816770_28816904_28897555_28897656_28912953_28913122_28914668_28914834_28916919
ES.7398.1	chr12	-	502	1	Intergenic	novelGene_6097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAGTAAGAAG	4256	False	NA	NA	False	NA	NA	NA	28804445	28803943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_28803900_28804400
ES.7399.1	chr12	-	201	1	Intergenic	novelGene_6098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCATCCCTCTCTGCATC	5340	False	NA	NA	False	AAGAAA	-1	NA	28881074	28880873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_28880900_28881100
ES.74.1	chr1	-	143	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	9900867	9900724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9900700_9900900
ES.740.1	chr1	+	835	3	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCACAATTTGATGAGT	2282	False	NA	NA	False	NA	NA	NA	74426211	74429972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74426519_74427046_74427139_74429536
ES.7400.1	chr12	+	3878	13	NIC	ENSMUSG00000061911.16	novel	2735	7	NA	NA	48	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	1.06718737290547	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTAATGGGTCTGAGTC	NA	False	NA	NA	False	AATAAA	-30	NA	29890256	29973207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_29890392_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ES.7401.1	chr12	+	6656	24	NNC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-94	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	6.91345363836555	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTCCTTTGTACTTTG	5793	False	NA	NA	False	AATAAA	-23	NA	29987940	30067658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449_30066281_30066333
ES.7401.10	chr12	+	5477	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	79	1058	65	-1051	multi-exon	FALSE	canonical	2	15	junction_3	5.1578392554561	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCTCTTGTTTTTAAT	5966	False	NA	NA	False	NA	NA	NA	29988113	30066599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ES.7401.11	chr12	+	5908	18	NNC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-12009	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_17	7.58070762051154	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGAATCTGTCCTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	30034427	30067652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449_30066304_30066355
ES.7401.2	chr12	+	6580	22	NIC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-43	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	5.96246764420263	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGAATCTGTCCTTTGT	5844	False	NA	NA	False	AATAAA	-17	NA	29987991	30067652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_29988324_30023991_30024064_30025489_30025562_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ES.7401.3	chr12	+	4849	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	-36	1801	-36	-1794	multi-exon	FALSE	canonical	2	15	junction_3	5.1578392554561	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACATGGGTTTCGAAAT	5851	False	NA	NA	False	ATTAAA	-10	NA	29987998	30065856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ES.7401.4	chr12	+	6575	24	NNC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	8.18731556163924	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCTGTCCTTTGTACTT	5866	False	NA	NA	False	AATAAA	-21	NA	29988013	30067656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049896_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449_30066281_30066333
ES.7401.5	chr12	+	6503	23	NNC	ENSMUSG00000020674.18	novel	6614	23	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	7.56131957524665	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGAATCTGTCCTTT	5866	False	NA	NA	False	AATAAA	-15	NA	29988013	30067650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_29988324_30023991_30024064_30025489_30025562_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449_30066281_30066333
ES.7401.6	chr12	+	6628	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	-21	7	-21	0	multi-exon	FALSE	canonical	2	15	junction_3	5.1578392554561	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGAATCTGTCCTTT	5866	False	NA	NA	False	AATAAA	-15	NA	29988013	30067650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ES.7402.1	chr12	-	2903	10	ISM	ENSMUSG00000020673.15	ENSMUST00000021005.15	3299	17	29269	-690	-8356	690	3prime_fragment	FALSE	canonical	0	0	junction_8	1.64053589558149	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATCCTGACATTTATA	NA	False	NA	NA	False	NA	NA	NA	30153354	30103967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_30105163_30124092_30124217_30125775_30125876_30128057_30128190_30134606_30134778_30142543_30142753_30144777_30145016_30148167_30148339_30150317_30150577_30153050
ES.7402.2	chr12	-	6299	1	NIC	ENSMUSG00000020673.15	novel	3299	17	NA	NA	11733	15156	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30133265	30126966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_30127000_30133300
ES.7402.3	chr12	-	2490	4	ISM	ENSMUSG00000020673.15	ENSMUST00000021005.15	3299	17	29256	38615	-8369	-1150	internal_fragment	FALSE	canonical	0	0	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAATACATCTGGGGTC	NA	False	NA	NA	False	AATAAA	-19	NA	30153367	30143272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_30145016_30148167_30148339_30150317_30150577_30153050
ES.7403.1	chr12	-	5950	16	NNC	ENSMUSG00000020672.15	novel	552	8	NA	NA	0	-24605	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.4360439485692	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATTAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	30423374	30269666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_30270831_30270951_30274313_30276766_30276974_30279574_30279647_30286587_30286705_30293302_30293342_30295116_30295247_30307964_30308093_30317029_30317122_30326660_30326749_30338124_30338167_30338270_30338315_30357170_30357229_30357325_30357378_30362534_30362673_30423156
ES.7404.1	chr12	+	3915	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-3061	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	82.8024449998862	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30631363	30641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30634088_30634295_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.10	chr12	+	1777	2	Intergenic	novelGene_6102	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAACTCTCGCGAGAAG	NA	False	NA	NA	False	NA	NA	NA	30631466	30634379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_30631943_30633078
ES.7404.11	chr12	+	3652	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2956	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	82.7808351411525	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30631468	30641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633350_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.12	chr12	+	2978	5	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2956	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.6091972642418	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631468	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631613_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.13	chr12	+	3377	6	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2956	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	83.0744244638505	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631468	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.14	chr12	+	5032	6	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2956	5	intron_retention	FALSE	canonical	0	0	junction_1	83.2571918815426	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTGCTTTCGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	30631468	30641219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631761_30633078_30633302_30633704_30633774_30635468_30637254_30638472_30638567_30638650
ES.7404.15	chr12	+	2000	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2948	522	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1507932425791	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTTGGTCTTGTTTTT	NA	False	NA	NA	False	AATGAA	-43	NA	30631476	30639499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30635590_30636851_30636975_30637198_30637254_30638472_30638567_30638650
ES.7404.16	chr12	+	3175	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2948	143	intron_retention	FALSE	canonical	1	2	junction_3	80.1768877753018	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTACCTGCTCCCTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	30631476	30639120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30634226_30634295_30635468_30637254_30638472_30638567_30638650
ES.7404.17	chr12	+	3352	6	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2947	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.111830321305	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631477	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631927_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.18	chr12	+	3299	5	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2947	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	76.7475569643751	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631477	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.19	chr12	+	2126	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2941	778	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	79.2983115975506	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAGTAAGAAATACACTC	NA	False	NA	NA	False	AATAAA	-38	NA	30631483	30639755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.2	chr12	+	3549	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2993	904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	85.1541086631891	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATTTAAAAGGTTAA	NA	False	NA	NA	False	AATAAA	-9	NA	30631431	30639881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633259_30633350_30633704_30633774_30635475_30636975_30637198_30637254_30638472_30638567_30638650
ES.7404.20	chr12	+	4969	5	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2939	0	intron_retention	FALSE	canonical	3	4	junction_1	86.3495801958527	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631485	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633704_30633774_30635468_30637254_30638472_30638567_30638650
ES.7404.21	chr12	+	3708	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2939	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	77.1507932425791	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTGTGCTTTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	30631485	30641216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30635590_30636851_30636975_30637198_30637254_30638472_30638567_30638650
ES.7404.22	chr12	+	3537	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2900	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.165644837704	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30631524	30641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631761_30633078_30633302_30633704_30633774_30634088_30634295_30635468_30635555_30637198_30637254_30638472_30638567_30638650
ES.7404.23	chr12	+	3265	5	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2747	571	intron_retention	FALSE	canonical	0	0	junction_2	85.6519118292172	200	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAATGGCTTATCT	NA	False	NA	NA	False	TATAAA	-10	NA	30631677	30639548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30635468_30637254_30638472_30638567_30638650
ES.7404.24	chr12	+	2967	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	7	-3	7	3	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGTGCTTTCGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	30634431	30641217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.25	chr12	+	4344	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.0211010048545	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634436	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30636975_30637198_30637254_30638472_30638567_30638650
ES.7404.26	chr12	+	3803	3	FSM	ENSMUSG00000043061.11	ENSMUST00000218826.2	762	3	-2468	-573	20	573	multi-exon	FALSE	canonical	3	172	junction_2	9.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAATGGCTTATCTGT	NA	False	NA	NA	False	TATAAA	-12	NA	30634444	30639550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30637254_30638472_30638567_30638650
ES.7404.27	chr12	+	2586	6	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	21	11	at_least_one_novel_splicesite	FALSE	non_canonical	3	81	junction_5	38.6812616133445	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	30634445	30641225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650_30640423_30640797
ES.7404.28	chr12	+	2520	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_2	70.2224145127466	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634445	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30635590_30638472_30638567_30638650_30640423_30640797
ES.7404.29	chr12	+	2199	4	NIC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	21	579	intron_retention	FALSE	canonical	3	172	junction_1	8.9566858950296	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTATCTGTTTCTAC	NA	False	NA	NA	False	TATAAA	-18	NA	30634445	30639556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.3	chr12	+	3444	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2981	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	82.9687022651045	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631443	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633259_30633302_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.30	chr12	+	6393	2	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	22	0	intron_retention	FALSE	non_canonical	3	81	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634446	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30640423_30640797
ES.7404.31	chr12	+	4564	4	NIC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	23	7	intron_retention	FALSE	canonical	3	167	junction_1	10.3387082795139	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTTTCGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	30634447	30641221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_30634562_30635468_30637254_30638472_30638567_30638650
ES.7404.32	chr12	+	4182	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	23	0	intron_retention	FALSE	non_canonical	3	81	junction_4	42.3814523111231	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634447	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30637254_30638472_30638567_30638650_30640423_30640797
ES.7404.33	chr12	+	6769	1	Genic_Genomic	ENSMUSG00000043061.11	novel	NA	NA	NA	NA	23	2	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACAGTGTGCTTTCGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	30634447	30641216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_30634400_30641200
ES.7404.34	chr12	+	5177	3	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	23	4	intron_retention	FALSE	non_canonical	3	81	junction_2	55	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30634447	30641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30637254_30638472_30640423_30640797
ES.7404.35	chr12	+	1290	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	23	1658	23	579	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTATCTGTTTCTAC	NA	False	NA	NA	False	TATAAA	-18	NA	30634447	30639556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.36	chr12	+	4116	3	FSM	ENSMUSG00000043061.11	ENSMUST00000218826.2	762	3	-2457	-897	31	897	multi-exon	FALSE	canonical	3	172	junction_2	9.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAGTTAAAAATATTTAAA	NA	False	NA	NA	False	AATAAA	-2	NA	30634455	30639874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30637254_30638472_30638567_30638650
ES.7404.37	chr12	+	5458	3	FSM	ENSMUSG00000043061.11	ENSMUST00000218826.2	762	3	-2456	-2240	32	3	multi-exon	FALSE	canonical	3	172	junction_2	9.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGTGCTTTCGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	30634456	30641217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30637254_30638472_30638567_30638650
ES.7404.38	chr12	+	5129	4	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	32	3	intron_retention	FALSE	non_canonical	0	0	junction_1	70.258253765819	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGTGCTTTCGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	30634456	30641217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30637254_30638426_30638567_30638650_30640423_30640797
ES.7404.39	chr12	+	1567	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	54	922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.0211010048545	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAGATCGTTTGATAG	NA	False	NA	NA	False	AATAAA	-27	NA	30634478	30639899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30635555_30637198_30637254_30638472_30638567_30638650
ES.7404.4	chr12	+	5295	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2970	4	intron_retention	FALSE	canonical	1	2	junction_3	80.1768877753018	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30631454	30641218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30634226_30634295_30635468_30637254_30638472_30638567_30638650
ES.7404.40	chr12	+	2644	5	NNC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	54	579	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.0211010048545	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTTATCTGTTTCTAC	NA	False	NA	NA	False	TATAAA	-18	NA	30634478	30639556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30634562_30635468_30636975_30637198_30637254_30638472_30638567_30638650
ES.7404.5	chr12	+	2925	1	Intergenic	novelGene_6099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAACTCTCGCGAGAAG	NA	False	NA	NA	False	NA	NA	NA	30631454	30634379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_30631500_30634400
ES.7404.6	chr12	+	1228	3	Intergenic	novelGene_6100	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30631455	30634355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_30631943_30633259_30633350_30633704
ES.7404.7	chr12	+	5214	6	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2961	0	intron_retention	FALSE	canonical	3	15	junction_3	79.2373649233744	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631463	30641214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30637254_30638472_30638567_30638650
ES.7404.8	chr12	+	3674	8	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2961	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	82.5170359652466	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACAGTGTGCTTTCGTG	NA	False	NA	NA	False	AATAAA	-13	NA	30631463	30641215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30634226_30634295_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ES.7404.9	chr12	+	1353	3	Intergenic	novelGene_6101	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30631465	30634357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_30631943_30633078_30633302_30633704
ES.7405.1	chr12	-	751	4	Antisense	novelGene_ENSMUSG00000043061.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATAAAATATT	NA	False	NA	NA	False	NA	NA	NA	30634550	30612457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_30612917_30614536_30614637_30615725_30615788_30634420
ES.7406.1	chr12	-	3084	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	0	-330	0	0	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTCTGTTGGTTTCC	NA	False	NA	NA	False	AATAAA	-32	NA	30961588	30943324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7406.10	chr12	-	1514	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-32	1584	-14	966	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTTTATTTGCTT	NA	False	NA	NA	False	NA	NA	NA	30961602	30944908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.11	chr12	-	1522	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	-23	1255	-23	965	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCTTTTTATTTGCT	NA	False	NA	NA	False	NA	NA	NA	30961611	30944909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7406.12	chr12	-	1418	6	NNC	ENSMUSG00000044573.17	novel	2754	6	NA	NA	1	912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	594.231402738024	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGCCTGCTTCTTAC	NA	False	NA	NA	False	AATACA	-17	NA	30961569	30944962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954725_30954831_30955067_30955142_30961488
ES.7406.14	chr12	-	8348	5	NIC	ENSMUSG00000044573.17	novel	2754	6	NA	NA	6	909	intron_retention	FALSE	canonical	3	735	junction_3	326.741870595123	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGTCTGCCTGCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	30961582	30944965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_30945953_30946114_30946221_30947743_30954831_30955067_30955142_30961488
ES.7406.16	chr12	-	1395	6	NNC	ENSMUSG00000044573.17	novel	3066	6	NA	NA	0	906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	544.156007042098	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961570	30944968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955115_30961488
ES.7406.18	chr12	-	1669	5	NIC	ENSMUSG00000044573.17	novel	2754	6	NA	NA	8	906	intron_retention	FALSE	canonical	3	794	junction_3	301.557933903255	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961580	30944968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30955142_30961488
ES.7406.19	chr12	-	1392	6	NNC	ENSMUSG00000044573.17	novel	3066	6	NA	NA	-4	906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	585.347076528106	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961552	30944968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955079_30955142_30961488
ES.7406.2	chr12	-	3056	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	6	4	-2	-4	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTGTTCTGTTGGT	NA	False	NA	NA	False	AATAAA	-28	NA	30961564	30943328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.20	chr12	-	1590	6	FSM	ENSMUSG00000044573.17	ENSMUST00000219697.2	668	6	-16	-906	2	906	multi-exon	FALSE	canonical	3	794	junction_3	322.338331571037	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961586	30944968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954983_30955067_30955142_30961488
ES.7406.21	chr12	-	1309	5	NIC	ENSMUSG00000044573.17	novel	2754	6	NA	NA	-1	906	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	641.158862919324	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961571	30944968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_30945953_30946114_30946221_30947743_30947806_30955067_30955142_30961488
ES.7406.22	chr12	-	1263	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	18	1473	0	747	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTAAGTGTTCTC	NA	False	NA	NA	False	AAAAAG	-22	NA	30961570	30945127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7406.23	chr12	-	1227	6	NNC	ENSMUSG00000044573.17	novel	3066	6	NA	NA	0	733	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	585.347076528106	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAATACTGGTATGTGT	NA	False	NA	NA	False	AAAAAG	-8	NA	30961570	30945141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955089_30955142_30961488
ES.7406.24	chr12	-	1251	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-19	1834	-1	716	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTAAGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	30961589	30945158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.25	chr12	-	683	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	9	2374	1	176	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGGTGTGGCTAAGC	NA	False	NA	NA	False	GATAAA	-17	NA	30961561	30945698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.26	chr12	-	708	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	2	2044	2	176	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGGTGTGGCTAAGC	NA	False	NA	NA	False	GATAAA	-17	NA	30961586	30945698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7406.3	chr12	-	2875	3	ISM	ENSMUSG00000044573.17	ENSMUST00000218696.2	499	4	6599	-2628	6585	152	3prime_fragment	FALSE	canonical	3	836	junction_2	356	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATCAAATGTGGAATGT	NA	False	NA	NA	False	AAAAAG	-24	NA	30954963	30943502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_30946221_30947743_30947806_30954868
ES.7406.4	chr12	-	2833	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	233	0	97	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTTGTGGTTCCACCT	NA	False	NA	NA	False	AATACA	-32	NA	30961570	30943557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.5	chr12	-	2719	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	34	1	-6	-1	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTTTGGGATTTTAATT	NA	False	NA	NA	False	ATTAAA	-22	NA	30961554	30943655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7406.6	chr12	-	2732	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-1	335	-1	-5	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATACTTTGGGATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	30961571	30943659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.7	chr12	-	2562	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-16	520	2	-190	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCATTTATTTCCT	NA	False	NA	NA	False	NA	NA	NA	30961586	30943844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.8	chr12	-	2308	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-9	767	-9	-437	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGTGCTTCTTGGTTT	NA	False	NA	-8	True	ATTAAA	-14	NA	30961579	30944091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ES.7406.9	chr12	-	2314	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	2	438	2	-438	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGGGTGCTTCTTGGTT	NA	False	NA	-9	True	ATTAAA	-13	NA	30961586	30944092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ES.7407.1	chr12	+	1769	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	-22	3	-22	-3	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTTTGTGTTCACTC	8017	False	NA	13	True	AATAAA	-21	NA	30961644	31010158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
ES.7407.2	chr12	+	2374	9	FSM	ENSMUSG00000020669.16	ENSMUST00000142693.8	2266	9	29	-137	5	-1	multi-exon	FALSE	canonical	3	40	junction_1	6.67902500369627	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTAAGTACTTTGTGTTC	8068	False	NA	9	True	AATAAA	-17	NA	30961695	31010154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992868_31008846_31008904_31009802
ES.7407.3	chr12	+	1602	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	29	119	5	25	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGGATTCACTGTTTAC	8068	False	NA	NA	False	NA	NA	NA	30961695	31010042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
ES.7407.4	chr12	+	3857	9	NNC	ENSMUSG00000020669.16	novel	2266	9	NA	NA	12	1518	intron_retention	FALSE	canonical	0	0	junction_4	17.7900077290596	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACATGCCTTGGTCAT	8075	False	NA	NA	False	NA	NA	NA	30961702	31011679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989607_30989686_30990289_30990419_30991965_30992868_31008846_31008904_31009802
ES.7408.1	chr12	+	4653	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	4	-1569	4	1569	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGAGTGTTTTCCTAGC	NA	False	NA	NA	False	AATAAA	-18	NA	31123863	31131819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_31125322_31128624
ES.7408.2	chr12	+	2682	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	92	314	92	-314	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTAGTCCTCAGGTGTT	NA	False	NA	NA	False	TATAAA	-16	NA	31123951	31129936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_31125322_31128624
ES.7409.1	chr12	+	289	1	Intergenic	novelGene_6103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTCCTTCACTGCCTAA	779	False	NA	NA	False	NA	NA	NA	31267104	31267393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31267100_31267400
ES.741.1	chr1	+	2674	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-90	292	-90	-289	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGCCTCTGTGGTTTTT	3220	False	NA	13	True	ACTAAA	-22	NA	74430577	74436152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ES.741.2	chr1	+	2953	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	-80	3	-80	0	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTGCCCCCACCTCTG	3230	False	NA	NA	False	AATAAA	-14	NA	74430587	74436441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ES.741.3	chr1	+	2960	6	NIC	ENSMUSG00000026176.14	novel	393	4	NA	NA	-22	0	intron_retention	FALSE	canonical	1	2	junction_1	7.4027022093287	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTGCCCCCACCTCTG	3941	False	NA	NA	False	AATAAA	-14	NA	74431298	74436441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74431409_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995
ES.741.4	chr1	+	2519	6	NNC	ENSMUSG00000026176.14	novel	2876	7	NA	NA	143	-289	intron_retention	FALSE	canonical	0	0	junction_1	9.31665175908169	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGCCTCTGTGGTTTTT	4106	False	NA	13	True	ACTAAA	-22	NA	74431463	74436152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74431485_74432436_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ES.741.5	chr1	+	3383	6	ISM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	803	3	150	0	3prime_fragment	FALSE	canonical	3	15	junction_1	3.84707681233427	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGTGCCCCCACCTCTG	4113	False	NA	NA	False	AATAAA	-14	NA	74431470	74436441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ES.741.6	chr1	+	2340	3	ISM	ENSMUSG00000026176.14	ENSMUST00000141175.2	2957	6	2587	24	2220	-24	3prime_fragment	FALSE	canonical	3	20	junction_1	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAAAAAATACACA	1182	False	NA	NA	False	NA	NA	NA	74433540	74436417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74433892_74433995_74434182_74434614
ES.741.7	chr1	+	2073	3	ISM	ENSMUSG00000026176.14	ENSMUST00000141175.2	2957	6	2589	289	2222	-289	3prime_fragment	FALSE	canonical	3	20	junction_1	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGCCTCTGTGGTTTTT	1184	False	NA	13	True	ACTAAA	-22	NA	74433542	74436152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74433892_74433995_74434182_74434614
ES.7410.1	chr12	+	165	2	Intergenic	novelGene_6104	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTTTGGCCATGGTGT	5503	False	NA	NA	False	NA	NA	NA	31275743	31277175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31275785_31277051
ES.7410.2	chr12	+	3029	3	Intergenic	novelGene_6105	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACAAGAGACCAGAAA	5547	False	NA	NA	False	AATAAA	-12	NA	31275787	31284052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31277275_31279404_31279536_31282641
ES.7411.1	chr12	+	155	1	Intergenic	novelGene_6106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	31288523	31288678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31288500_31288700
ES.7412.1	chr12	+	161	1	Intergenic	novelGene_6107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	31297276	31297437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31297300_31297400
ES.7413.1	chr12	+	5709	34	NNC	ENSMUSG00000002900.18	novel	5784	33	NA	NA	-183	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5513729951499	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTCTTTTATTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31315049	31379643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31315162_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.10	chr12	+	5575	34	NNC	ENSMUSG00000002900.18	novel	5557	34	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	32.6283015280609	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTCTTTTATTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31315299	31379643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371073_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.12	chr12	+	5817	34	NNC	ENSMUSG00000002900.18	novel	5784	33	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_14	34.2200248540252	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATCCTATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	31315312	31379637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31347865_31347926_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.14	chr12	+	5252	30	ISM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	7037	5	-4325	-5	3prime_fragment	FALSE	canonical	3	88	junction_10	21.5590883969828	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAACATCCTATGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	31322329	31379633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.15	chr12	+	4632	26	ISM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	20332	2	7450	-2	3prime_fragment	FALSE	canonical	3	88	junction_6	22.2638720801212	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATGTTTCTTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	31335623	31379641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.16	chr12	+	4577	24	ISM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	22326	0	9445	0	3prime_fragment	FALSE	canonical	3	88	junction_4	22.7468188847624	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTATGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	31337618	31379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.17	chr12	+	5018	21	ISM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	31264	1	18382	-1	3prime_fragment	FALSE	canonical	3	88	junction_1	23.1544272224558	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGTTTCTTTTATTG	NA	False	NA	NA	False	AATAAA	-22	NA	31346555	31379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.19	chr12	+	2214	11	ISM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	42654	1	-15573	-1	3prime_fragment	FALSE	canonical	3	96	junction_4	19.5253681143276	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATCCTATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	31357946	31379637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.2	chr12	+	5858	33	FSM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	-72	-2	-13	2	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTTCTTTTATTGTTA	NA	False	NA	NA	False	AATAAA	-25	NA	31315219	31379645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.3	chr12	+	5866	33	NIC	ENSMUSG00000002900.18	novel	5557	34	NA	NA	-8	0	intron_retention	FALSE	canonical	3	20	junction_1	26.6295293975973	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTATGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	31315224	31379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.4	chr12	+	5728	34	NNC	ENSMUSG00000002900.18	novel	5557	34	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.5513729951499	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGTTTCTTTTATTG	NA	False	NA	NA	False	AATAAA	-22	NA	31315225	31379642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31315358_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.5	chr12	+	5698	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	10	-151	10	0	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTCTTTTATTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31315242	31379643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7413.8	chr12	+	5634	34	NNC	ENSMUSG00000002900.18	novel	5557	34	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	37.7710467724729	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTATGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	31315298	31379638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338308_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351214_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ES.7414.1	chr12	+	4958	1	Antisense	novelGene_ENSMUSG00000020664.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31382301	31387259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_31382300_31387300
ES.7415.1	chr12	+	177	1	Intergenic	novelGene_6108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	31387347	31387524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31387300_31387500
ES.7416.1	chr12	+	175	1	Antisense	novelGene_ENSMUSG00000020664.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAACCCTTTG	3206	False	NA	NA	False	NA	NA	NA	31394052	31394227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_31394100_31394200
ES.7417.1	chr12	-	3763	1	Antisense	novelGene_ENSMUSG00000002900.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	31324002	31320239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_31320200_31324000
ES.7418.1	chr12	-	6925	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	41	-4422	2	4422	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGCTTAATTTGTGACA	NA	False	NA	NA	False	AATAAA	-13	NA	31401411	31376853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.10	chr12	-	4043	12	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	0	-288	intron_retention	FALSE	canonical	3	710	junction_4	64.671324134343	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACTGGTTATTCTGA	NA	False	NA	-13	True	AATAAA	-15	NA	31401413	31381563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.11	chr12	-	2242	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-12	-288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	232.0923607216	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACTGGTTATTCTGA	NA	False	NA	-13	True	AATAAA	-15	NA	31401425	31381563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31382255_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.13	chr12	-	5296	10	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-15	-288	intron_retention	FALSE	canonical	3	735	junction_5	53.1659410144372	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACTGGTTATTCTGA	NA	False	NA	-13	True	AATAAA	-15	NA	31401428	31381563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31385656_31390278_31390381_31390862_31391007_31391376_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.14	chr12	-	4041	12	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-3	-288	intron_retention	FALSE	canonical	3	735	junction_6	59.5911691277871	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTACTGGTTATTCTGA	NA	False	NA	-13	True	AATAAA	-15	NA	31401416	31381563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.16	chr12	-	2108	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	7	429	7	-429	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACTTCCAAATTGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	31401445	31381704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.17	chr12	-	2027	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	47	-429	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	232.249355894929	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACTTCCAAATTGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	31401366	31381704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391001_31391372_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.18	chr12	-	8292	12	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	32	-433	intron_retention	FALSE	non_canonical	0	0	junction_6	251.797307963212	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTAACTTCCAAATT	NA	False	NA	-5	True	AATAAA	-15	NA	31401381	31381708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31387343_31387539_31390381_31390862_31391007_31391376_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.19	chr12	-	2157	13	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	9	-435	intron_retention	FALSE	canonical	3	710	junction_3	72.8714145296738	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTATTTAACTTCCAAA	NA	False	NA	-7	True	AATAAA	-13	NA	31401404	31381710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.2	chr12	-	4476	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	27	-1959	-12	1959	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGCCTTCACCTTTATA	NA	False	NA	NA	False	AATAAA	-23	NA	31401425	31379316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.20	chr12	-	3327	13	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	8	-435	intron_retention	FALSE	canonical	3	710	junction_4	68.8250600354906	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTATTTAACTTCCAAA	NA	False	NA	-7	True	AATAAA	-13	NA	31401405	31381710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.23	chr12	-	3992	2	ISM	ENSMUSG00000020664.11	ENSMUST00000220415.2	1176	3	50	1828	50	-1828	5prime_fragment	FALSE	canonical	3	916	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGTTGTATAGTTA	NA	False	NA	NA	False	NA	NA	NA	31401363	31395746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31399675_31401299
ES.7418.24	chr12	-	2830	1	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-15	-4680	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATTTTATTCTTTAAT	NA	False	NA	NA	False	NA	NA	NA	31401428	31398598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31398600_31401400
ES.7418.3	chr12	-	4161	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	28	-1645	-11	1645	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTTATTTAACT	NA	False	NA	NA	False	AATAAA	-26	NA	31401424	31379630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.4	chr12	-	2262	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	7	275	7	-275	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGAGTGCATACTAAGA	NA	False	NA	0	True	AATAAA	-28	NA	31401445	31381550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.5	chr12	-	2263	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-3	-287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	230.456197945722	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	-12	True	AATAAA	-16	NA	31401416	31381562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31382242_31382337_31382470_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.6	chr12	-	3494	13	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-11	-287	intron_retention	FALSE	canonical	3	710	junction_4	68.8250600354906	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	-12	True	AATAAA	-16	NA	31401424	31381562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7418.7	chr12	-	2231	14	NNC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	-15	-287	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	232.249355894929	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	-12	True	AATAAA	-16	NA	31401428	31381562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391001_31391372_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ES.7419.1	chr12	-	5094	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	2	-1159	2	1159	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACTGGGCAGAAGAGGC	NA	False	NA	NA	False	NA	NA	NA	31549552	31533668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ES.7419.11	chr12	-	2419	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	11	1507	11	565	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGATGTGGAGGAATCT	NA	False	NA	NA	False	NA	NA	NA	31549543	31536334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ES.7419.12	chr12	-	3207	6	NNC	ENSMUSG00000020659.17	novel	3900	6	NA	NA	27	5	intron_retention	FALSE	canonical	1	2	junction_5	74.4618022881531	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTTTATGTGAATTT	NA	False	NA	-15	True	ATTAAA	-21	NA	31549527	31536894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31548166
ES.7419.13	chr12	-	4279	5	NIC	ENSMUSG00000020659.17	novel	3900	6	NA	NA	2	5	intron_retention	FALSE	canonical	3	130	junction_4	30.2365672654817	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTTTATGTGAATTT	NA	False	NA	-15	True	ATTAAA	-21	NA	31549552	31536894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31544749_31549521
ES.7419.14	chr12	-	1860	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	5	2072	5	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATTTTTATGTG	NA	False	NA	-20	True	ATTAAA	-16	NA	31549549	31536899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ES.7419.15	chr12	-	1872	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	63	1965	2	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATTTTTATGTG	NA	False	NA	-20	True	ATTAAA	-16	NA	31549552	31536899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ES.7419.17	chr12	-	1046	7	NNC	ENSMUSG00000020659.17	novel	3945	6	NA	NA	1	-641	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	75.1541009452504	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACCTTTCGTATTTCA	NA	False	NA	NA	False	NA	NA	NA	31549553	31537918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31538314_31538935_31539131_31540466_31540541_31541510_31541595_31542077_31542176_31544580_31544749_31549521
ES.7419.18	chr12	-	1114	1	NIC	ENSMUSG00000020659.17	novel	3937	6	NA	NA	29	-11134	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAGAGAAATGAAT	NA	False	NA	NA	False	NA	NA	NA	31549525	31548411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31548400_31549500
ES.7419.2	chr12	-	3949	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	63	-112	2	5	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTCGTGTATTTCTTT	NA	False	NA	NA	False	AGTAAA	-36	NA	31549552	31534822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ES.7419.5	chr12	-	4150	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	-250	0	-250	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549865	31534934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ES.7419.7	chr12	-	4139	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	-310	108	-249	-1	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCCTAGATGAGTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	31549864	31534935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ES.7419.9	chr12	-	4019	7	NNC	ENSMUSG00000020659.17	novel	3937	6	NA	NA	4	-2	intron_retention	FALSE	canonical	2	3	junction_2	74.2752014844494	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCCTAGATGAGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	31549550	31534936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31538314_31538935_31539131_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ES.742.1	chr1	+	174	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGCTGAA	6947	False	NA	NA	False	NA	NA	NA	74439305	74439479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74439300_74439500
ES.7420.1	chr12	-	178	1	Intergenic	novelGene_6109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCCAGGAC	NA	False	NA	NA	False	NA	NA	NA	31623279	31623101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31623100_31623300
ES.7421.1	chr12	-	6147	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	3	5	3	-5	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTATTTTGACCACTGG	NA	False	NA	NA	False	CATAAA	-11	NA	31684631	31640970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.10	chr12	-	1809	8	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	140.865401090863	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGGAGTTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	31684666	31645356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31646377_31650642_31650744_31667060_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.11	chr12	-	1563	9	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	-10	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	132.096496452404	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684644	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31645602_31645791_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.12	chr12	-	1565	10	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	9	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	162.143968949408	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684625	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31645867_31645986_31646144_31646192_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.13	chr12	-	1759	8	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	4	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.167364006241	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684630	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676896_31680791_31680893_31684261_31684380_31684603
ES.7421.14	chr12	-	1626	7	NIC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	4	-18	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	144.180153511732	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684653	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31646377_31650642_31650744_31667073_31667180_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.17	chr12	-	1676	8	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	-2	-18	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	132.512764113731	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684636	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680860_31680893_31684261_31684380_31684603
ES.7421.18	chr12	-	1693	9	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	1	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.096496452404	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31684633	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31645919_31645967_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.19	chr12	-	3256	4	ISM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	8435	18	8435	-18	3prime_fragment	FALSE	canonical	3	313	junction_3	38.9643711898732	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATAAAAGAAAATGCAA	NA	False	NA	NA	False	NA	NA	NA	31676163	31645377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113
ES.7421.2	chr12	-	5034	7	NIC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	3	-1005	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	144.180153511732	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTCTTTTCTTTTTGG	NA	False	NA	NA	False	TATAAA	-39	NA	31684654	31641970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31646377_31650642_31650744_31667073_31667180_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.20	chr12	-	1391	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-4	4768	-4	-374	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTCAGTAGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	31684638	31645733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.21	chr12	-	3535	6	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-9	23225	-9	-18831	5prime_fragment	FALSE	canonical	3	313	junction_1	47.6931860961291	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAAGAAGCTATCGGTCC	NA	False	NA	NA	False	AATGAA	-34	NA	31684643	31664190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.22	chr12	-	956	6	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-26	25821	-3	17287	5prime_fragment	FALSE	canonical	3	313	junction_1	47.6931860961291	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGTCACATTTTCT	NA	False	NA	NA	False	TATAAA	-12	NA	31684660	31666786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.23	chr12	-	949	6	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	1	17287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	155.573005370469	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGTCACATTTTCT	NA	False	NA	NA	False	TATAAA	-12	NA	31684633	31666786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31667180_31674113_31674250_31676724_31676896_31680791_31680893_31684261_31684380_31684603
ES.7421.24	chr12	-	429	4	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-22	35753	1	7355	5prime_fragment	FALSE	canonical	3	339	junction_3	38.0555150040335	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTTGCTAGCAG	NA	False	NA	NA	False	AAGAAA	-43	NA	31684656	31676718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.3	chr12	-	4831	4	NNC	ENSMUSG00000020650.16	novel	1949	7	NA	NA	14334	-1030	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	171.127632680017	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCATGCTTGTGTTTTGA	NA	False	NA	NA	False	TATAAA	-14	NA	31670264	31641995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31646377_31650642_31650744_31667073_31667180_31670021
ES.7421.5	chr12	-	5150	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-32	1037	-9	-1037	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAGATCATGCTTGT	NA	False	NA	NA	False	TATAAA	-7	NA	31684666	31642002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.6	chr12	-	3257	1	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	38967	1445	6081	-1445	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGATCAGCATTCTTC	9136	False	NA	NA	False	AATAAA	-24	NA	31645667	31642410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31642400_31645700
ES.7421.7	chr12	-	4591	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	13	1551	13	-1551	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTTAGTGTTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	31684621	31642516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7421.8	chr12	-	5221	8	NNC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.167364006241	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTGGAGTTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	31684656	31645355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31678373_31678854_31680893_31684261_31684380_31684603
ES.7421.9	chr12	-	1906	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-142	4391	-119	3	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGGAGTTTTTAT	NA	False	NA	NA	False	TATAAA	-13	NA	31684776	31645356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ES.7422.1	chr12	+	3021	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-26	2	-26	-2	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	NA	False	NA	10	True	AATAAA	-17	NA	31704841	31987627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ES.7422.10	chr12	+	2720	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	3	11659	3	-51	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTCATAGTTGGCT	NA	False	NA	NA	False	CATAAA	-45	NA	31704870	31975970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.11	chr12	+	2343	19	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	9	-28203	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	29.1604755333882	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGAAATCTGTCTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	31704876	31947818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31947578
ES.7422.12	chr12	+	5862	23	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.5849896350772	318	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATCTTTGCTTTAGAGT	NA	False	NA	34	True	AATAAA	-40	NA	31704876	31979091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31886793_31886821_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.13	chr12	+	2571	22	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	9	-200	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	27.2960588717854	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTCCTTCCTCTTTCT	NA	False	NA	NA	False	ACTAAA	-14	NA	31704876	31975821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720308_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.14	chr12	+	3949	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	9	10424	9	1184	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAGCACCACAGGATA	NA	False	NA	NA	False	AATAAA	-23	NA	31704876	31977205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.15	chr12	+	4355	21	NIC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	10	-1329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	28.1412064417999	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGAGTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	31704877	31977739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31970552_31970633_31975643
ES.7422.16	chr12	+	5075	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	11	9296	11	-735	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCATCTTTTAACCA	NA	False	NA	NA	False	ACTAAA	-24	NA	31704878	31978333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.17	chr12	+	5655	21	NIC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	11	7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	28.4033008645122	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCCAAGTAAGAAAGACT	NA	False	NA	18	True	AATAAA	-24	NA	31704878	31979075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.18	chr12	+	3249	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	11	11122	11	486	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGGGCAATATGTTTAA	NA	False	NA	NA	False	AATATA	-21	NA	31704878	31976507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.19	chr12	+	1675	12	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	14	-103586	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.7924713822437	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTTTGATCCAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	31704881	31872435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31871875
ES.7422.2	chr12	+	4515	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-19	9886	-19	-1325	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTGTTCTGTGACT	NA	False	NA	NA	False	AATAAA	-18	NA	31704848	31977743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.20	chr12	+	2957	20	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	15	-23571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	33.6097037827716	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATGTTAAGTGAGAT	NA	False	NA	NA	False	AAAACA	-13	NA	31704882	31952450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944426_31944517_31945122_31952412
ES.7422.21	chr12	+	2562	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	16	11804	16	-196	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTCCTCTTTCTGTTA	NA	False	NA	NA	False	ACTAAA	-18	NA	31704883	31975825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.22	chr12	+	4102	22	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	16	1347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.8012871037628	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCAGCATTTTATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	31704883	31977368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851984_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.23	chr12	+	3250	1	NIC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	4669	-263235	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATATGAATAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	31709536	31712786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31709500_31712800
ES.7422.24	chr12	+	4333	3	NIC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	5281	-161608	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	63.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTTGCCCAGTTTATT	NA	False	NA	NA	False	NA	NA	NA	31710148	31814413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31710856_31715463_31715522_31810845
ES.7422.25	chr12	+	5454	18	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	15444	8563	15444	-2	internal_fragment	FALSE	canonical	3	60	junction_3	9.96325428693653	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGCAAGCCAAGTA	NA	False	NA	9	True	AATAAA	-15	NA	31720311	31979066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.26	chr12	+	189	1	Intergenic	novelGene_6111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	31745927	31746116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31745900_31746100
ES.7422.27	chr12	+	195	1	Intergenic	novelGene_6114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGTACATGGA	NA	False	NA	NA	False	NA	NA	NA	31801737	31801932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31801700_31801900
ES.7422.28	chr12	+	176	1	Intergenic	novelGene_6115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCCATAATGCTT	NA	False	NA	NA	False	NA	NA	NA	31839317	31839493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31839300_31839500
ES.7422.29	chr12	+	6660	1	Intergenic	novelGene_6116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAACCCCATTTCACTC	NA	False	NA	NA	False	NA	NA	NA	31842225	31848885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31842200_31848900
ES.7422.3	chr12	+	6535	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-13	7860	-13	678	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAACTGGTTTTTGATTT	NA	False	NA	NA	False	AATAAA	-28	NA	31704854	31979769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.30	chr12	+	230	1	Intergenic	novelGene_6117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGCGTGGAAGGGCAC	NA	False	NA	NA	False	AAAAAG	-28	NA	31850673	31850903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31850700_31850900
ES.7422.31	chr12	+	2805	8	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	-93199	-84351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.0448056988306	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATGTGTAACAAATCC	NA	False	NA	NA	False	AATAAA	-20	NA	31850920	31891670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31851056_31851476_31851590_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753
ES.7422.32	chr12	+	3640	14	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	147110	9890	-92142	-1329	internal_fragment	FALSE	canonical	3	64	junction_7	10.4116457327315	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGAGTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	31851977	31977739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.33	chr12	+	3527	13	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	147535	9888	-91717	-1327	internal_fragment	FALSE	canonical	3	64	junction_6	10.5343353953737	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAGTTTGTTCTGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	31852402	31977741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.34	chr12	+	3709	12	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-62732	-1329	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	24.0756383848147	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTGAGTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	31881387	31977739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31881734_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.35	chr12	+	3954	11	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-57615	-849	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	25.0319795461725	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCATTGTGAAACTTCT	NA	False	NA	NA	False	AGTAAA	-34	NA	31886504	31978219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31886821_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.36	chr12	+	1530	11	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-57585	-196	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	25.0319795461725	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTCCTCTTTCTGTTA	NA	False	NA	NA	False	ACTAAA	-18	NA	31886534	31975825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31886821_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.37	chr12	+	4769	11	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-57584	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	25.0319795461725	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCAGTGCAAGCCAAGT	NA	False	NA	8	True	AATAAA	-14	NA	31886535	31979065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31886821_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.38	chr12	+	3279	2	NNC	ENSMUSG00000035933.6	novel	750	5	NA	NA	-2959	-28211	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTAGCCTTTGAAAT	NA	False	NA	NA	False	ATTAAA	-11	NA	31941160	31947810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31944208_31947578
ES.7422.39	chr12	+	745	4	ISM	ENSMUSG00000035933.6	ENSMUST00000219672.2	750	5	6497	196	6497	-196	3prime_fragment	FALSE	canonical	3	90	junction_2	3.77123616632825	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTCCTCTTTCTGTTA	1019	False	NA	NA	False	ACTAAA	-18	NA	31950616	31975825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.4	chr12	+	5833	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-2	8551	-2	10	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGTAAGAAAGACTATC	NA	False	NA	21	True	AATAAA	-27	NA	31704865	31979078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.40	chr12	+	1138	5	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	245775	0	6523	0	3prime_fragment	FALSE	canonical	3	25	junction_4	29.4819860253681	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTCTTCCTTCCA	1045	False	NA	12	True	AATAAA	-19	NA	31950642	31987629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ES.7422.41	chr12	+	3673	4	ISM	ENSMUSG00000035933.6	ENSMUST00000219672.2	750	5	6540	-2775	6540	-272	3prime_fragment	FALSE	canonical	3	90	junction_2	3.77123616632825	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	1062	False	NA	NA	False	CATAAA	-34	NA	31950659	31978796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.42	chr12	+	3784	1	Intergenic	novelGene_6121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGCTAGGAAGACTAT	NA	False	NA	NA	False	NA	NA	NA	31965769	31969553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_31965800_31969600
ES.7422.43	chr12	+	8000	2	NNC	ENSMUSG00000035933.6	novel	372	2	NA	NA	1114	-245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAGGGGAAAGATCAAGA	NA	False	NA	NA	False	NA	NA	NA	31970785	31978823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31971469_31971506
ES.7422.44	chr12	+	6652	1	NIC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	5283	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	NA	False	NA	10	True	AATAAA	-17	NA	31980975	31987627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_31981000_31987600
ES.7422.5	chr12	+	5592	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	-2	8792	-2	-231	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACTACCATGGTCATT	NA	False	NA	NA	False	NA	NA	NA	31704865	31978837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.6	chr12	+	4969	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	0	9413	0	-852	5prime_fragment	FALSE	canonical	3	60	junction_7	21.3659402170966	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGCATTGTGAAACT	NA	False	NA	NA	False	AGTAAA	-31	NA	31704867	31978216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.7	chr12	+	415	5	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	0	267268	0	-255660	5prime_fragment	FALSE	canonical	3	105	junction_4	10.3047319227625	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACAACTGGCAAGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	31704867	31720361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314
ES.7422.8	chr12	+	5681	21	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	28.7295579499581	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGCAAGCCAAGTA	NA	False	NA	9	True	AATAAA	-15	NA	31704867	31979066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950893_31950973_31969649_31969777_31970552_31970633_31975643
ES.7422.9	chr12	+	2931	20	NNC	ENSMUSG00000035933.6	novel	2997	23	NA	NA	0	-23571	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	33.6097037827716	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATGTTAAGTGAGAT	NA	False	NA	NA	False	AAAACA	-13	NA	31704867	31952450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944385_31944517_31945122_31952412
ES.7423.1	chr12	+	2895	1	Antisense	novelGene_ENSMUSG00000002996.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAT	NA	False	NA	NA	False	NA	NA	NA	31991666	31994561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_31991700_31994600
ES.7424.1	chr12	-	1779	7	NNC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	41.3145118437685	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTCGCCTGTAAGTT	9078	False	NA	-1	True	AATAAA	-21	NA	31704807	31690044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31690944_31691500_31691748_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ES.7424.10	chr12	-	8056	3	ISM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	5127	2	5077	-2	intron_retention	FALSE	canonical	3	98	junction_2	15.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTATGACTCGCCTG	NA	False	NA	-7	True	AATAAA	-15	NA	31699698	31690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31690944_31691500_31691728_31692762
ES.7424.12	chr12	-	1816	7	NNC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	41.6029512842005	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCAAGACGGTATGACT	9032	False	NA	-13	True	AATAAA	-9	NA	31704853	31690056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31690967_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ES.7424.13	chr12	-	3859	4	ISM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	48	3192	-2	-3192	5prime_fragment	FALSE	canonical	2	86	junction_3	16.1107279647928	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTAATTGCA	9108	False	NA	NA	False	AATAAA	-19	NA	31704777	31693240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31696738_31698764_31698887_31702289_31702441_31704688
ES.7424.14	chr12	-	4395	3	NIC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	8	1896	intron_retention	FALSE	canonical	2	86	junction_2	18	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACTGTATTGAAATCTC	9118	False	NA	NA	False	NA	NA	NA	31704767	31694721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31698887_31702289_31702441_31704688
ES.7424.15	chr12	-	1489	1	FSM	ENSMUSG00000020648.4	ENSMUST00000219855.2	296	1	-27	-1166	3	1166	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACTAGAATAAAAGT	9083	False	NA	NA	False	AATAAA	-24	NA	31704802	31703313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31703300_31704800
ES.7424.2	chr12	-	8124	2	NNC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	6069	0	intron_retention	FALSE	canonical	1	1	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	NA	False	NA	-5	True	AATAAA	-17	NA	31698706	31690048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31690967_31691500
ES.7424.3	chr12	-	1778	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	-6	1	-6	-1	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTATGACTCGCCTGT	9054	False	NA	-6	True	AATAAA	-16	NA	31704831	31690049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ES.7424.5	chr12	-	3999	6	ISM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	20	2	0	-2	intron_retention	FALSE	canonical	3	98	junction_2	10.3614670775909	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTATGACTCGCCTG	9080	False	NA	-7	True	AATAAA	-15	NA	31704805	31690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289
ES.7424.6	chr12	-	1851	8	NNC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_4	48.7454864472557	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTATGACTCGCCTG	9080	False	NA	-7	True	AATAAA	-15	NA	31704805	31690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31697520_31697621_31698764_31698887_31702289_31702441_31704688
ES.7424.9	chr12	-	1628	6	NIC	ENSMUSG00000020648.4	novel	1773	7	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	45.1025498170558	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGGTATGACTCGCCTG	9081	False	NA	-7	True	AATAAA	-15	NA	31704804	31690050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31702289_31702441_31704688
ES.7425.1	chr12	-	6461	1	Intergenic	novelGene_6110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTGCAAACTGAATCCAA	NA	False	NA	NA	False	NA	NA	NA	31730293	31723832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31723800_31730300
ES.7426.1	chr12	-	1564	1	Intergenic	novelGene_6112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACGAAGTGAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	31751623	31750059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31750100_31751600
ES.7427.1	chr12	-	179	1	Intergenic	novelGene_6113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATGTAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	31800641	31800462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31800500_31800600
ES.7428.1	chr12	-	173	2	Antisense	novelGene_ENSMUSG00000035933.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	31877282	31861107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_31861115_31877116
ES.7428.2	chr12	-	144	1	Intergenic	novelGene_6118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	31861268	31861124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31861100_31861300
ES.7428.3	chr12	-	179	1	Intergenic	novelGene_6119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATATAGATCATAC	NA	False	NA	NA	False	NA	NA	NA	31877285	31877106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31877100_31877300
ES.7429.1	chr12	-	244	1	Intergenic	novelGene_6120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTGTGATCTTGTTG	280	False	NA	NA	False	NA	NA	NA	31950276	31950032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_31950000_31950300
ES.743.1	chr1	+	189	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGAAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	74447259	74447448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74447300_74447400
ES.7430.1	chr12	-	2734	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	292	116	-9	-116	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGGTGTTATAAGTAG	NA	False	NA	78	True	GATAAA	-5	NA	32000242	31976368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.11	chr12	-	1786	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	315	1041	1	-1041	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATTGCCTTATTTT	NA	False	NA	NA	False	NA	NA	NA	32000219	31977293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.12	chr12	-	5075	8	NIC	ENSMUSG00000002996.18	novel	2733	9	NA	NA	-6	-26	intron_retention	FALSE	canonical	3	134	junction_7	32.6227665589414	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGTGTTGGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	32000239	31979407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.13	chr12	-	2700	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	5	28	3	-28	multi-exon	FALSE	canonical	3	134	junction_8	33.3164280048147	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGATGTGTTGGAC	NA	False	NA	NA	False	AATAAA	-14	NA	32000217	31979409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.14	chr12	-	961	3	FSM	ENSMUSG00000002996.18	ENSMUST00000175666.2	979	3	16	2	3	-2	multi-exon	FALSE	canonical	3	134	junction_2	45	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAACTGTAGATTGTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	32000217	31989751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31990506_31993827_31994012_32000194
ES.7430.4	chr12	-	3833	2	ISM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	19167	206	3435	-206	intron_retention	FALSE	canonical	3	219	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTCTTTGATTTCTGG	NA	False	NA	-12	True	AATAAA	-12	NA	31981367	31976458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_31977507_31978582
ES.7430.5	chr12	-	2738	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	180	224	-121	-224	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGGAAAAAAAAGG	NA	False	NA	-30	True	NA	NA	NA	32000354	31976476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.7	chr12	-	6040	9	NIC	ENSMUSG00000002996.18	novel	3142	11	NA	NA	-110	-224	intron_retention	FALSE	canonical	3	134	junction_8	32.7354452390677	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGGAAAAAAAAGG	NA	False	NA	-30	True	NA	NA	NA	32000343	31976476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7430.8	chr12	-	2788	10	NIC	ENSMUSG00000002996.18	novel	3142	11	NA	NA	-86	-224	intron_retention	FALSE	canonical	3	134	junction_9	31.04834939252	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGGAAAAAAAAGG	NA	False	NA	-30	True	NA	NA	NA	32000319	31976476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ES.7431.1	chr12	-	3413	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	-34	-1	-34	1	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAAGCATGGTTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	32111329	32008473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ES.7431.2	chr12	-	9115	2	NNC	ENSMUSG00000002997.16	novel	3378	11	NA	NA	92345	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	32018243	32008474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_32013194_32013847
ES.7431.4	chr12	-	1502	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	149	6	149	-2	multi-exon	FALSE	canonical	2	2	junction_1	6.20849857416868	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACGTTCCAAGCATGG	NA	False	NA	NA	False	AATAAA	-13	NA	32111085	32008480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ES.7431.5	chr12	-	2068	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	-4	1314	-4	-1310	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACAAATGTCAGTCAGC	NA	False	NA	NA	False	AATAAA	-16	NA	32111299	32009788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ES.7432.1	chr12	-	160	1	Intergenic	novelGene_6122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1944	False	NA	NA	False	NA	NA	NA	32121882	32121722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_32121700_32121900
ES.7433.1	chr12	+	1843	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	-49	2446	-49	-2446	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGGCTACAAGAATGAC	NA	False	NA	NA	False	AATAAA	-12	NA	32428653	32430496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32428700_32430500
ES.7433.2	chr12	+	4289	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	-49	0	-49	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTTTTCTAATGAT	NA	False	NA	15	True	AATAAA	-15	NA	32428653	32432942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32428700_32432900
ES.7434.1	chr12	+	4670	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-119	-24	-119	24	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTGTGTATCAGATGC	NA	False	NA	17	True	AATAAA	-42	NA	32870214	32903372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.10	chr12	+	3963	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-5	-2251	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	281.901206098874	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTGTGGTGTTGTA	NA	False	NA	12	True	AATAAA	-15	NA	32870328	32901097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898337_32898424_32898751_32900421
ES.7434.12	chr12	+	4396	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	1	-1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	355.576770894838	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32870334	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898337_32898424_32898751_32900421
ES.7434.13	chr12	+	4485	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	3	22	at_least_one_novel_splicesite	FALSE	canonical	1	36	junction_2	276.697325610494	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGTGTGTATCAGAT	NA	False	NA	15	True	AATAAA	-40	NA	32870336	32903370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880262_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.14	chr12	+	2194	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	12	-2251	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTGTGGTGTTGTA	NA	False	NA	12	True	AATAAA	-15	NA	32870345	32901097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.15	chr12	+	1792	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	14	2721	14	-2721	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGTGGGTTCGTGTTT	NA	False	NA	NA	False	NA	NA	NA	32870347	32900627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.16	chr12	+	2699	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	16	-1742	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32870349	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.17	chr12	+	4508	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	23	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	279.814938843515	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTGATTGTGTGTATC	NA	False	NA	11	True	AATAAA	-36	NA	32870356	32903366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890937_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.2	chr12	+	2905	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-119	1741	-119	-1741	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870214	32901607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.20	chr12	+	4438	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	29	-1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	281.901206098874	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32870362	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898337_32898424_32898751_32900421
ES.7434.21	chr12	+	4232	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	30	265	30	-265	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTTTCTTGAAATGA	NA	False	NA	NA	False	AGTAAA	-16	NA	32870363	32903083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.22	chr12	+	3894	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	38	-2251	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	355.576770894838	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTGTGGTGTTGTA	NA	False	NA	12	True	AATAAA	-15	NA	32870371	32901097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898505_32898548_32898751_32900421
ES.7434.23	chr12	+	3125	12	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	40	-1744	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	353.470023978328	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGACATCATTTATTAA	NA	False	NA	11	True	ATTAAA	-15	NA	32870373	32901604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32873197_32873580_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.24	chr12	+	2426	12	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	41	-2257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.245522905975	719	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCAAGTTGTTTGTGGT	NA	False	NA	6	True	AATAAA	-44	NA	32870374	32901091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32875659_32875857_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.25	chr12	+	4631	12	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	41	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	357.245522905975	734	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGTGTGTATCAGAT	NA	False	NA	15	True	AATAAA	-40	NA	32870374	32903370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32878400_32878524_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.26	chr12	+	2323	10	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	42	3833	42	-3833	5prime_fragment	FALSE	canonical	3	823	junction_5	71.9811360747889	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATATGAACTGGTAG	NA	False	NA	NA	False	AATAAA	-15	NA	32870375	32899515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615
ES.7434.27	chr12	+	4332	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	134	-1742	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	281.901206098874	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32870467	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898330_32898418_32898751_32900421
ES.7434.28	chr12	+	2640	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-39	-1743	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	257.16743573011	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGACATCATTTATTAAT	NA	False	NA	12	True	ATTAAA	-16	NA	32870760	32901605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870909_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.29	chr12	+	4375	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-39	-8	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	257.16743573011	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTAGTTCTGTTAGTG	NA	False	NA	-15	True	AATAAA	-10	NA	32870760	32903340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870909_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.3	chr12	+	4598	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-119	22	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGTGTGTATCAGAT	NA	False	NA	15	True	AATAAA	-40	NA	32870214	32903370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.30	chr12	+	2605	11	NNC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-26	-1743	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.079721787254	729	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGACATCATTTATTAAT	NA	False	NA	12	True	ATTAAA	-16	NA	32870773	32901605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870887_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.31	chr12	+	4309	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	-16	19	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	337.935851900919	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGATTGTGTGTATCA	NA	False	NA	12	True	AATAAA	-37	NA	32870783	32903367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870909_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.32	chr12	+	3098	10	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	8718	2251	8252	-2251	3prime_fragment	FALSE	canonical	3	823	junction_4	66.5382095741487	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTGTGGTGTTGTA	NA	False	NA	12	True	AATAAA	-15	NA	32879051	32901097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.33	chr12	+	3655	9	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	9832	2251	9366	-2251	intron_retention	FALSE	canonical	3	823	junction_4	68.3381985056674	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTGTGGTGTTGTA	NA	False	NA	12	True	AATAAA	-15	NA	32880165	32901097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615
ES.7434.34	chr12	+	4256	9	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	10775	1744	10309	-1744	3prime_fragment	FALSE	canonical	3	823	junction_3	69.2712061393477	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGACATCATTTATTAA	NA	False	NA	11	True	ATTAAA	-15	NA	32881108	32901604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.35	chr12	+	4307	9	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	11942	-1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	305.07414570068	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32882741	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898337_32898424_32898751_32900421
ES.7434.36	chr12	+	3993	8	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	14565	-17	14099	17	3prime_fragment	FALSE	canonical	3	823	junction_2	73.9544813119695	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTTGATTGTGTGTAT	NA	False	NA	10	True	AATAAA	-35	NA	32884898	32903365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.37	chr12	+	7447	2	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	22983	-1744	intron_retention	FALSE	canonical	0	0	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGACATCATTTATTAA	NA	False	NA	11	True	ATTAAA	-15	NA	32893782	32901604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32898198_32898572
ES.7434.38	chr12	+	1924	3	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	26829	-1750	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	433	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTATGGACATCATT	NA	False	NA	5	True	ATTAAA	-9	NA	32897628	32901598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32898198_32898572_32898751_32900421
ES.7434.39	chr12	+	1852	3	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	27195	-1742	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	433	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32897994	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32898242_32898330_32898751_32900421
ES.7434.4	chr12	+	2689	10	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-26	-1744	combination_of_known_splicesites	FALSE	canonical	1	20	junction_7	295.605885438996	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGACATCATTTATTAA	NA	False	NA	11	True	ATTAAA	-15	NA	32870307	32901604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32896704_32896846_32898615_32898751_32900421
ES.7434.40	chr12	+	1186	1	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	30210	1619	29744	-1619	mono-exon	FALSE	NA	NA	NA	NA	NA	727	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAGATACTCATCCT	NA	False	NA	NA	False	AATACA	-12	NA	32900543	32901729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_32900500_32901700
ES.7434.5	chr12	+	4491	11	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-24	-1742	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	281.901206098874	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCATTTATTAATT	NA	False	NA	13	True	ATTAAA	-17	NA	32870309	32901606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32898240_32898327_32898751_32900421
ES.7434.6	chr12	+	2295	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	-17	2249	-17	-2249	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGGTGTTGTACA	NA	False	NA	14	True	AATAAA	-17	NA	32870316	32901099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7434.7	chr12	+	6219	10	NNC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_3	301.192731865155	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTTAGTGAAATGTTA	NA	False	NA	-7	True	AATAAA	-18	NA	32870316	32903348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32870626_32880165_32880323_32883030_32883135_32884896_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615
ES.7434.9	chr12	+	4998	10	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	-10	-2247	intron_retention	FALSE	canonical	3	823	junction_4	72.9611768910928	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTGTACATT	NA	False	NA	16	True	AATAAA	-19	NA	32870323	32901101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_32870626_32880165_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ES.7435.1	chr12	-	6159	1	Intergenic	novelGene_6123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAACTAGTATGTAAGC	NA	False	NA	NA	False	NA	NA	NA	32877759	32871600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_32871600_32877800
ES.7436.1	chr12	+	4177	6	NNC	ENSMUSG00000020570.16	novel	2019	5	NA	NA	-30662	-811	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	117.014529012426	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTAGCCTCAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	32973227	33029048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_32973345_33004286_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.10	chr12	+	4773	6	NIC	ENSMUSG00000020570.16	novel	4999	6	NA	NA	10	-364	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	139.027191584956	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGTTCATATGAACCTT	8435	False	NA	13	True	ATTAAA	-13	NA	33004192	33029495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33004359_33015371_33015500_33016448_33016621_33017534_33017743_33024126_33024319_33025588
ES.7436.12	chr12	+	3123	3	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	11	6539	11	23	5prime_fragment	FALSE	canonical	3	305	junction_1	2	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTCAAAAAGAAGTAAAT	8436	False	NA	NA	False	AAAACA	-13	NA	33004193	33020364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_33004359_33015371_33015500_33017534
ES.7436.13	chr12	+	4474	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	12	-2467	12	-489	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAACTGCTTCAGTACAT	8437	False	NA	NA	False	AAAAAG	-23	NA	33004194	33029370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.15	chr12	+	4254	6	NNC	ENSMUSG00000020570.16	novel	4999	6	NA	NA	24	-822	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.815592835706	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAGATTATACTTAGC	8449	False	NA	NA	False	NA	NA	NA	33004206	33029037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33004359_33004568_33004694_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.16	chr12	+	3475	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	26	-1482	26	-1474	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTGTTCCTCATGGA	8451	False	NA	NA	False	AATAAA	-11	NA	33004208	33028385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.17	chr12	+	3991	4	NIC	ENSMUSG00000020570.16	novel	2019	5	NA	NA	29	-827	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	128.063352377728	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTTAAGATTATAC	8454	False	NA	NA	False	NA	NA	NA	33004211	33029032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33004359_33017534_33017743_33024126_33024319_33025588
ES.7436.18	chr12	+	1798	6	NNC	ENSMUSG00000020570.16	novel	2019	5	NA	NA	29	-273	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	144.846953713221	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTAAGATTCATTCTT	8454	False	NA	NA	False	AATAAA	-15	NA	33004211	33026630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33004359_33015371_33015500_33017534_33017743_33019179_33019261_33024126_33024319_33025588
ES.7436.2	chr12	+	2045	6	FSM	ENSMUSG00000020570.16	ENSMUST00000076698.13	4999	6	-2	2956	-2	0	multi-exon	FALSE	canonical	2	9	junction_1	113.462592954683	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAATGCCCCGTT	8130	False	NA	NA	False	AATAAA	-7	NA	33003887	33026903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004018_33004286_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.20	chr12	+	4135	6	NNC	ENSMUSG00000020570.16	novel	4999	6	NA	NA	80	-829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.027191584956	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAGATTTAAGATTAT	8568	False	NA	NA	False	NA	NA	NA	33004325	33029030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33004359_33015371_33015500_33015835_33015968_33017534_33017743_33024126_33024319_33025588
ES.7436.21	chr12	+	4846	2	ISM	ENSMUSG00000020570.16	ENSMUST00000218816.2	529	4	4320	-118	4311	118	3prime_fragment	FALSE	canonical	3	285	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGGTTTAAAAATTTG	NA	False	NA	NA	False	AATAAA	-23	NA	33019715	33025831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_33024319_33025588
ES.7436.22	chr12	+	5591	2	ISM	ENSMUSG00000020570.16	ENSMUST00000218816.2	529	4	4655	-1198	4646	8	3prime_fragment	FALSE	canonical	3	285	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCCCGTTGTTATATT	NA	False	NA	NA	False	AATAAA	-15	NA	33020050	33026911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_33024319_33025588
ES.7436.23	chr12	+	8039	2	ISM	ENSMUSG00000020570.16	ENSMUST00000218816.2	529	4	4799	-3790	4790	-356	3prime_fragment	FALSE	canonical	3	285	junction_1	0	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGAACCTTGTTTGACT	NA	False	NA	21	True	ATTAAA	-21	NA	33020194	33029503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_33024319_33025588
ES.7436.24	chr12	+	5490	2	ISM	ENSMUSG00000020570.16	ENSMUST00000218816.2	529	4	6874	-3316	6865	-830	3prime_fragment	FALSE	canonical	3	285	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATAAAGATTTAAGATTA	NA	False	NA	NA	False	NA	NA	NA	33022269	33029029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_33024319_33025588
ES.7436.25	chr12	+	6140	3	NNC	ENSMUSG00000020570.16	novel	529	4	NA	NA	6905	36	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	142.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAGAAAATGGCTTCT	NA	False	NA	NA	False	AAGAAA	-11	NA	33022309	33029895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33024319_33025588_33029549_33029724
ES.7436.3	chr12	+	4271	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	-105	-2147	-105	-809	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGCCTCAAGAATTTTC	8320	False	NA	NA	False	NA	NA	NA	33004077	33029050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.4	chr12	+	4931	6	NNC	ENSMUSG00000020570.16	novel	4999	6	NA	NA	-98	36	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	117.014529012426	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAGAAAATGGCTTCT	8327	False	NA	NA	False	AAGAAA	-11	NA	33004084	33029895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588_33029547_33029724
ES.7436.5	chr12	+	2058	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	-31	-8	-31	8	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCCCGTTGTTATATT	8394	False	NA	NA	False	AATAAA	-15	NA	33004151	33026911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.6	chr12	+	4637	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	-10	-2608	-10	-348	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTGACTCTGCTTGG	8415	False	NA	29	True	ATTAAA	-29	NA	33004172	33029511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.7	chr12	+	1809	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	2	208	2	-208	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTATTGTGTGTGTGC	8427	False	NA	NA	False	CATAAA	-12	NA	33004184	33026695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.8	chr12	+	3144	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	3	-1128	3	1128	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCCATTGAAATGAGAG	8428	False	NA	NA	False	ATTAAA	-11	NA	33004185	33028031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7436.9	chr12	+	2167	6	NNC	ENSMUSG00000020570.16	novel	2019	5	NA	NA	10	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	139.572776715232	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCCCGTTGTTATATT	8435	False	NA	NA	False	AATAAA	-15	NA	33004192	33026911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33004359_33015040_33015191_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ES.7437.1	chr12	-	2687	5	NNC	ENSMUSG00000035860.10	novel	2953	20	NA	NA	-872	3835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGAAAACTTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	33103857	33096947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_33099164_33100982_33101082_33102108_33102212_33103391_33103564_33103760
ES.7437.2	chr12	-	2859	2	NNC	ENSMUSG00000035860.10	novel	604	4	NA	NA	-857	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGCCTTGATTGCTTCC	NA	False	NA	NA	False	ATTAAA	-12	NA	33103842	33100786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_33103564_33103760
ES.7438.1	chr12	+	1686	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	-10	-1	8	1	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCTGTACATTGAGTC	NA	False	NA	NA	False	NA	NA	NA	33197699	33301146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ES.7438.2	chr12	+	1495	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	-4	184	-4	-184	multi-exon	FALSE	canonical	2	8	junction_2	2.35702260395516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACACCTGCTGGCTA	NA	False	NA	NA	False	AATAAA	-20	NA	33197705	33300961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ES.7438.3	chr12	+	2803	12	NIC	ENSMUSG00000020564.18	novel	2973	13	NA	NA	3	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.84836554336668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTGTTTTCTCTGTT	NA	False	NA	NA	False	AAAAAG	-30	NA	33197775	33423188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33197915_33198431_33198501_33267710_33267816_33375909_33376133_33391919_33392195_33394888_33394972_33395836_33396088_33408654_33408848_33412971_33413094_33416970_33417914_33420981_33421057_33422863
ES.7438.4	chr12	+	2401	8	NNC	ENSMUSG00000020564.18	novel	2563	8	NA	NA	10710	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.728431359084684	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGATCTGATCTG	1627	False	NA	NA	False	NA	NA	NA	33376113	33418272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33376133_33386996_33387153_33391919_33392195_33394888_33394972_33395836_33396088_33408654_33408848_33412971_33413094_33416970
ES.7439.1	chr12	-	3569	1	Genic_Genomic	ENSMUSG00000079143.4	novel	NA	NA	NA	NA	-3414	-34706	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTTCTGTGACTCTAG	2279	False	NA	NA	False	NA	NA	NA	33282267	33278698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_33278700_33282300
ES.744.1	chr1	+	3261	20	FSM	ENSMUSG00000026175.13	ENSMUST00000027366.13	3124	20	-174	37	-174	-37	multi-exon	FALSE	canonical	0	0	junction_1	2.98379742801229	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTAATGTCTCTCACAC	NA	False	NA	NA	False	AATAAA	-25	NA	74448360	74474681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74448596_74454227_74454314_74455124_74455200_74457518_74457716_74458727_74458837_74458953_74459065_74460411_74460615_74460719_74460799_74460937_74461037_74462085_74462240_74462833_74462935_74463021_74463160_74464695_74464855_74465710_74465891_74466398_74466545_74466637_74466783_74467225_74467415_74469775_74469845_74471449_74471591_74474036
ES.744.2	chr1	+	3141	19	NNC	ENSMUSG00000026175.13	novel	658	3	NA	NA	-3622	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.8910248513906	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGGCTTTAATGTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	74454589	74474675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74454797_74455124_74455200_74457518_74457716_74458727_74458837_74458953_74459065_74460411_74460615_74460719_74460799_74460937_74461037_74462085_74462240_74462833_74462935_74463021_74463160_74464695_74464855_74465710_74465891_74466398_74466545_74466637_74466783_74467225_74467415_74469775_74469845_74471449_74471591_74474036
ES.744.3	chr1	+	3175	16	ISM	ENSMUSG00000026175.13	ENSMUST00000027366.13	3124	20	10266	-543	589	543	3prime_fragment	FALSE	canonical	0	0	junction_5	2.74388208363422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACACGCGGCACTCATG	NA	False	NA	NA	False	ATTAAA	-45	NA	74458800	74475261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74458837_74458953_74459065_74460411_74460615_74460719_74460799_74460937_74461037_74462085_74462240_74462833_74462935_74463021_74463160_74464695_74464855_74465710_74465891_74466398_74466545_74466637_74466783_74467225_74467415_74469775_74469845_74471449_74471591_74474036
ES.7440.1	chr12	+	465	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	211	-3	211	3	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCTGGTTTCATTC	NA	False	NA	7	True	AATAAA	-17	NA	33445063	33451269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
ES.7441.1	chr12	+	2447	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-108	1986	-108	1691	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACAGTTGTCTTTCCCTC	NA	False	NA	NA	False	AATAAA	-12	NA	33479525	33489405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.10	chr12	+	4242	3	NIC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-19	40	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	227	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAGAGGGAATTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	33479614	33491431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33479908_33486934_33487144_33487691
ES.7441.11	chr12	+	2388	5	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-15	1669	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	252.648471200599	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGAATACC	NA	False	NA	NA	False	ATTAAA	-7	NA	33479618	33489383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33479908_33481242_33481299_33483503_33483646_33486934_33487144_33487691
ES.7441.12	chr12	+	5947	3	NIC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-10	1693	intron_retention	FALSE	canonical	3	454	junction_2	60.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTGTCTTTCCCTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	33479623	33489407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33483646_33486934_33487144_33487691
ES.7441.13	chr12	+	4371	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-6	-40	-6	40	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAGAGGGAATTTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	33479627	33491431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.14	chr12	+	7093	3	NIC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	0	-828	intron_retention	FALSE	canonical	3	454	junction_2	60.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAATTCTCACATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	33479633	33490563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33483646_33486934_33487144_33487691
ES.7441.15	chr12	+	941	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	1	3383	1	294	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAACAAGAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33479634	33488008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.16	chr12	+	2295	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	5	1669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	255.223213851893	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGAATACC	NA	False	NA	NA	False	ATTAAA	-7	NA	33479638	33489383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33479908_33483503_33483646_33486934_33487150_33487714
ES.7441.17	chr12	+	4648	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	11	-334	11	334	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTCCAGTTTTTGTT	NA	False	NA	NA	False	AGTAAA	-14	NA	33479644	33491725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.2	chr12	+	3258	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-48	1115	-48	-1115	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAATTTATTTTTTTCTC	NA	False	NA	9	True	AGTAAA	-19	NA	33479585	33490276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.3	chr12	+	3421	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-42	946	-42	-946	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTGAATTTATAATTT	NA	False	NA	2	True	AATAAA	-14	NA	33479591	33490445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.4	chr12	+	1355	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-23	2993	-23	684	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTTTTCTAAAAGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	33479610	33488398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.5	chr12	+	3524	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-23	824	-23	-824	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCACATTTTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	33479610	33490567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.6	chr12	+	2332	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-20	1669	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	255.223213851893	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGAATACC	NA	False	NA	NA	False	ATTAAA	-7	NA	33479613	33489383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33479908_33483503_33483646_33486934_33487134_33487686
ES.7441.7	chr12	+	1224	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	-19	3120	-19	557	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTGCATTTACTCTTG	NA	False	NA	NA	False	ATTAAA	-34	NA	33479614	33488271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ES.7441.8	chr12	+	1262	5	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-19	539	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	252.648471200599	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCAGTGGAAAATGTTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	33479614	33488253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_33479908_33481242_33481299_33483503_33483646_33486934_33487144_33487691
ES.7441.9	chr12	+	4947	3	NIC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	-19	684	intron_retention	FALSE	canonical	3	454	junction_2	60.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTTTTCTAAAAGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	33479614	33488398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_33483646_33486934_33487144_33487691
ES.7442.1	chr12	+	1261	1	Intergenic	novelGene_6125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCATAAAGTTAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	33496470	33497731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_33496500_33497700
ES.7443.1	chr12	-	1983	1	Intergenic	novelGene_6124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTCTTACTTCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	33497249	33495266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_33495300_33497200
ES.7444.1	chr12	+	1496	2	FSM	ENSMUSG00000035799.7	ENSMUST00000049089.7	1628	2	138	-6	138	6	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTGGTCTATATTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	34007807	34009834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_34008638_34009168
ES.7445.1	chr12	-	199	1	Intergenic	novelGene_6126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATCAGTTTCCTCTG	NA	False	NA	NA	False	NA	NA	NA	34352671	34352472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_34352500_34352700
ES.7446.1	chr12	-	953	1	Intergenic	novelGene_6127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGTGTTATCTCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	35097096	35096143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_35096100_35097100
ES.7447.1	chr12	+	6234	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	-2	-1	-2	1	multi-exon	TRUE	canonical	3	72	junction_14	10.0218960281975	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGTTTACTTGGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35097182	35197479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.10	chr12	+	1168	7	FSM	ENSMUSG00000020590.17	ENSMUST00000222101.2	1145	7	-24	1	7	-1	multi-exon	FALSE	canonical	3	96	junction_3	5.7373048260195	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACTGTTTAATTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	35097191	35141966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567
ES.7447.11	chr12	+	4237	26	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	72	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	18.4266763145175	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097191	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.12	chr12	+	6133	25	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	21.6735565968199	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATGTGTTTACTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	35097191	35197476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.13	chr12	+	6284	27	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3555377170141	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGATGTGTTTACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	35097192	35197475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35102543_35102608_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.14	chr12	+	4130	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	8	2093	8	-1	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATTTTTAAAAATATGC	NA	False	NA	NA	False	AATAAA	-18	NA	35097192	35195385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.15	chr12	+	4554	28	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	9	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8139623366747	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTTTGGTGTATACA	NA	False	NA	NA	False	AATAAA	-11	NA	35097193	35195454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35116403_35116639_35128898_35128990_35129484_35129618_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.16	chr12	+	6489	27	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5363300941895	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGATGTGTTTACTTGGC	NA	False	NA	NA	False	AATAAA	-15	NA	35097193	35197477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35116403_35116639_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.17	chr12	+	5015	21	NNC	ENSMUSG00000020590.17	novel	3681	23	NA	NA	9	-5133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.4922859679513	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAAGATTTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	35097193	35179549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35176803
ES.7447.18	chr12	+	4071	25	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	10	72	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	27.291603053361	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097194	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.19	chr12	+	6126	25	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	-15	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.4327460447465	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	35097200	35197468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.2	chr12	+	6265	26	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	18.4266763145175	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTGTTTACTTGGCAG	NA	False	NA	NA	False	AATAAA	-17	NA	35097184	35197479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.21	chr12	+	4064	25	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	-13	66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	27.210087998551	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCCTTTGGTGTATA	NA	False	NA	NA	False	AATAAA	-9	NA	35097202	35195452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.22	chr12	+	2438	20	ISM	ENSMUSG00000020590.17	ENSMUST00000163677.3	3681	23	18	9965	-13	1730	5prime_fragment	FALSE	canonical	3	72	junction_14	10.4624377598204	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCATCATGGCCACA	NA	False	NA	NA	False	NA	NA	NA	35097202	35174717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428
ES.7447.23	chr12	+	4331	27	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	-13	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.1129039159049	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTTTGGTGTATACA	NA	False	NA	NA	False	AATAAA	-11	NA	35097202	35195454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35098807_35098917_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.24	chr12	+	4127	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	19.9195983895258	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTACTATTTTTAAAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	35097202	35195382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.26	chr12	+	6394	27	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.1083733434052	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGATGTGTTTACTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	35097202	35197476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35127368_35127552_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.27	chr12	+	6768	28	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	15	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.26481808176	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	35097230	35197468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35116403_35116639_35127368_35127609_35128898_35129012_35132867_35132971_35135852_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.28	chr12	+	6160	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	18	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.0466149297221	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCTGATGTGTTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	35097233	35197473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141488_35141588_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.29	chr12	+	5968	24	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.874618004961	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGATGTGTTTACTTG	NA	False	NA	NA	False	AATAAA	-13	NA	35097238	35197475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.3	chr12	+	4074	27	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	1	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	20.9074107073355	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097185	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087_35194130_35194265
ES.7447.30	chr12	+	7223	25	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	24	72	intron_retention	FALSE	canonical	3	72	junction_14	10.2262597702625	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097239	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.31	chr12	+	6150	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	33	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.0466149297221	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	35097248	35197468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141477_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.32	chr12	+	4398	15	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	18323	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	25.9202072302122	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	35155246	35197468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087_35194130_35194432
ES.7447.4	chr12	+	4267	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	2	1962	2	130	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTGTGAAGCCTTTGC	NA	False	NA	NA	False	NA	NA	NA	35097186	35195516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.5	chr12	+	4250	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	4	72	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	24.7558962673542	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097188	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.6	chr12	+	6232	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	19.9195983895258	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTCTGATGTGTTTACT	NA	False	NA	NA	False	AATAAA	-11	NA	35097188	35197473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.8	chr12	+	4115	25	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	72	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	21.6735565968199	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097191	35195458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7447.9	chr12	+	6257	26	NNC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	24.7558962673542	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	35097191	35197468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136038_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ES.7448.1	chr12	-	215	1	Intergenic	novelGene_6128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTTGATAAATGGTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	35486036	35485821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_35485800_35486000
ES.7449.1	chr12	+	2708	1	Intergenic	novelGene_6129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1626	False	NA	NA	False	AATAAA	-33	NA	35581173	35583881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_35581200_35583900
ES.745.1	chr1	+	177	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTAGACAG	NA	False	NA	NA	False	NA	NA	NA	74503462	74503639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74503500_74503600
ES.7450.1	chr12	-	5579	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-31	0	-31	0	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTTCATGCAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	35585068	35547972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.2	chr12	-	5194	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-24	378	-24	-378	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTTGTCTGTATTGC	NA	False	NA	NA	False	AATAAA	-17	NA	35585061	35548350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.3	chr12	-	4969	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	5	574	5	-574	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATTTTGTCAGTCTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	35585032	35548546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.4	chr12	-	4300	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	-10	1258	-10	-1258	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTAAGTTGTTTATGTG	NA	False	NA	NA	False	GATAAA	-26	NA	35585047	35549230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.5	chr12	-	3607	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	11	1930	11	-1930	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCAAAGTCCACTATTT	NA	False	NA	NA	False	GATAAA	-11	NA	35585026	35549902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.6	chr12	-	3068	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	14	2466	14	-2466	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACCTGAGATGCTCCCTA	NA	False	NA	NA	False	TTTAAA	-4	NA	35585023	35550438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ES.7450.7	chr12	-	2462	1	NIC	ENSMUSG00000019256.18	novel	5548	11	NA	NA	-2282	-12194	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	ACTAAA	-36	NA	35579060	35576598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_35576600_35579100
ES.7451.1	chr12	-	3052	3	Antisense	novelGene_ENSMUSG00000113548.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGATCATACTACAAAAGC	1868	False	NA	NA	False	NA	NA	NA	35684394	35660669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_35663478_35673913_35674044_35684280
ES.7452.1	chr12	+	775	8	FSM	ENSMUSG00000020581.12	ENSMUST00000020898.12	784	8	2	7	2	-7	multi-exon	FALSE	canonical	0	0	junction_1	0.989743318610787	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAATAGTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	36042907	36054079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36042969_36045508_36045655_36045893_36045958_36046073_36046127_36047421_36047496_36048581_36048646_36051684_36051769_36053850
ES.7453.1	chr12	+	178	1	Intergenic	novelGene_6130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36064190	36064368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_36064200_36064400
ES.7454.1	chr12	-	1992	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-59	-1	-48	1	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGGTGTTTAAATCAAA	NA	False	NA	-3	True	AATAAA	-21	NA	36092547	36064554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ES.7454.2	chr12	-	1662	7	NNC	ENSMUSG00000020577.18	novel	1932	6	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	325.628836083184	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTATATGGGTGTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	36092504	36064561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36064594_36064873_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ES.7454.3	chr12	-	1570	3	NNC	ENSMUSG00000020577.18	novel	1932	6	NA	NA	-34	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	492	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTATATGGGTGTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	36092533	36064561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36065772_36073995_36074072_36092249
ES.7454.4	chr12	-	6595	6	NNC	ENSMUSG00000020577.18	novel	1932	6	NA	NA	-27	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	350.164304291571	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTATATGGGTGTTTA	NA	False	NA	-10	True	AATAAA	-14	NA	36092526	36064561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36066051_36066136_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ES.7454.5	chr12	-	1003	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	-64	993	-53	-993	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGACATTTTTTTTTTCT	NA	False	NA	-3	True	ATTAAA	-20	NA	36092552	36065548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ES.7454.6	chr12	-	909	6	NNC	ENSMUSG00000020577.18	novel	1932	6	NA	NA	-13	-1000	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	438.165083045192	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTCCAGACATTTTT	NA	False	NA	-10	True	ATTAAA	-13	NA	36092512	36065555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36065772_36070488_36070603_36071840_36071908_36072751_36072833_36073903_36074072_36092249
ES.7454.8	chr12	-	1083	7	NNC	ENSMUSG00000020577.18	novel	1932	6	NA	NA	-11	-1002	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	390.723438707682	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTCCAGACATTT	NA	False	NA	-12	True	ATTAAA	-11	NA	36092510	36065557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36083518_36083650_36092249
ES.7455.1	chr12	+	6161	1	Antisense	novelGene_ENSMUSG00000020547.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-33	NA	36171365	36177526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_36171400_36177500
ES.7456.1	chr12	+	2463	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	-6	-1	-6	1	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTTCATAATTCGTG	NA	False	NA	22	True	AATAAA	-21	NA	36207106	36247291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ES.7456.2	chr12	+	1614	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	2	840	2	35	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAACTGATGTGAATGTA	NA	False	NA	NA	False	NA	NA	NA	36207114	36246450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ES.7456.4	chr12	+	1759	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	18	679	18	196	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTTTCTTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	36207130	36246611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ES.7456.5	chr12	+	2640	12	NNC	ENSMUSG00000036188.5	novel	2456	10	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	80.825697574656	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTTGTTTCATAATTC	NA	False	NA	19	True	AATAAA	-18	NA	36207132	36247288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36242113_36242178_36242392_36242535_36243668_36243798_36244982_36245113_36246218
ES.7456.7	chr12	+	5048	11	NNC	ENSMUSG00000036188.5	novel	2456	10	NA	NA	13	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	72.1402107011062	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATCTTGTTTCATAAT	NA	False	NA	17	True	AATAAA	-16	NA	36207169	36247286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_36207423_36215868_36216307_36217995_36219311_36219482_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ES.7456.8	chr12	+	3727	9	ISM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	7175	0	-3037	0	3prime_fragment	FALSE	canonical	3	149	junction_4	13.9104277432436	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	21	True	AATAAA	-20	NA	36214287	36247290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ES.7456.9	chr12	+	5094	3	ISM	ENSMUSG00000036188.5	ENSMUST00000220788.2	4329	8	22577	-871	22577	-4	3prime_fragment	FALSE	canonical	3	156	junction_2	12	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCATCTTGTTTCATAAT	NA	False	NA	17	True	AATAAA	-16	NA	36239901	36247286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_36243798_36244982_36245113_36246218
ES.7457.11	chr12	-	1916	13	NIC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	-74	-11	combination_of_known_junctions	FALSE	canonical	2	17	junction_12	296.503044766079	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTATATGG	NA	False	NA	-22	True	AATAAA	-10	NA	36208153	36141844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666_36206744_36208016
ES.7457.12	chr12	-	1958	13	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	399.022207680503	466	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTATATGG	NA	False	NA	-22	True	AATAAA	-10	NA	36206769	36141844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206279_36206433_36206666
ES.7457.16	chr12	-	1535	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	54	282	-1	-282	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTTTGTTTCAATG	NA	False	NA	NA	False	NA	NA	NA	36206770	36142115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ES.7457.17	chr12	-	2666	11	NIC	ENSMUSG00000020547.6	novel	738	8	NA	NA	5	1044	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	319.408531507848	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTGCTCTTGGTCAGT	NA	False	NA	NA	False	NA	NA	NA	36206819	36152427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_36153826_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ES.7457.18	chr12	-	7583	3	ISM	ENSMUSG00000020547.6	ENSMUST00000220763.2	371	4	1278	-7217	-16	-18	3prime_fragment	FALSE	canonical	3	1044	junction_2	12	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	ATTAAA	-39	NA	36206801	36172784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_36180168_36184889_36184955_36206666
ES.7457.19	chr12	-	3899	1	FSM	ENSMUSG00000113349.2	ENSMUST00000222844.2	1740	1	894	-3053	894	3053	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAACAAAAACACCCAAC	NA	False	NA	NA	False	NA	NA	NA	36197027	36193128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36193100_36197000
ES.7457.20	chr12	-	1654	1	FSM	ENSMUSG00000113349.2	ENSMUST00000222844.2	1740	1	143	-57	143	57	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAAAATGGTTG	NA	False	NA	NA	False	NA	NA	NA	36197778	36196124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36196100_36197800
ES.7457.3	chr12	-	1773	11	NIC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	324.888427002256	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206791	36141833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36206666
ES.7457.4	chr12	-	2125	2	ISM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	62207	2	15152	-2	3prime_fragment	FALSE	canonical	3	1153	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATATGGTCAGAGCGT	NA	False	NA	-13	True	AATAAA	-19	NA	36144617	36141835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_36142309_36142965
ES.7457.5	chr12	-	2506	9	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	-12033	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	475.661118865101	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATATGGTCAGAGCG	NA	False	NA	-14	True	AATAAA	-18	NA	36171802	36141836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36161227_36161351_36163966_36164077_36168985_36169122_36170717
ES.7457.6	chr12	-	3911	11	NIC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	18	-4	intron_retention	FALSE	canonical	3	931	junction_8	85.7956292593043	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTATATGGTCAGAGC	NA	False	NA	-15	True	AATAAA	-17	NA	36206806	36141837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ES.7457.7	chr12	-	5360	12	NNC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	-3	-4	intron_retention	TRUE	canonical	0	0	junction_3	402.911757457536	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTATATGGTCAGAGC	NA	False	NA	-15	True	AATAAA	-17	NA	36206788	36141837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_36142309_36142965_36143089_36154260_36154913_36155578_36155982_36156943_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ES.7457.9	chr12	-	1667	11	NIC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	16	-11	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	325.254377372542	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTATATGG	NA	False	NA	-22	True	AATAAA	-10	NA	36206808	36141844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36184889_36184955_36206666
ES.7458.1	chr12	-	239	1	FSM	ENSMUSG00000091007.2	ENSMUST00000171007.2	940	1	859	-158	859	158	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36431321	36431082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_36431100_36431300
ES.7459.1	chr12	+	2695	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	47	-52	12	-7	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACACAAACTTAATGCGT	NA	False	NA	NA	False	AATAAA	-23	NA	36431564	36739495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
ES.7459.2	chr12	+	3096	5	FSM	ENSMUSG00000043153.7	ENSMUST00000220519.2	3122	5	25	1	-4	-1	multi-exon	FALSE	canonical	3	12	junction_1	4.38035386698381	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAAACTTGGAGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	36431577	36528816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698
ES.7459.3	chr12	+	3336	5	FSM	ENSMUSG00000043153.7	ENSMUST00000220519.2	3122	5	353	-567	150	567	multi-exon	FALSE	canonical	3	12	junction_1	4.38035386698381	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAATCTGTCAGTATGAA	NA	False	NA	NA	False	NA	NA	NA	36431905	36529384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698
ES.7459.4	chr12	+	2253	10	FSM	ENSMUSG00000043153.7	ENSMUST00000221177.2	1456	10	57	-854	57	2	multi-exon	FALSE	canonical	0	0	junction_1	6.51494009523069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTCCTACAACATGT	NA	False	NA	NA	False	AATAAA	-16	NA	36432235	36739445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_36432303_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
ES.746.1	chr1	+	3046	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-22	3	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGTTTTTAAATTCT	838	False	NA	41	True	AATAAA	-26	NA	74545194	74570004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.10	chr1	+	2078	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	269	921	267	-921	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTGGCTCAGTCTCC	1129	False	NA	NA	False	AATGAA	-8	NA	74545485	74569080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.12	chr1	+	3788	5	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	272	4089	270	-334	5prime_fragment	FALSE	canonical	3	982	junction_3	45.5706868502111	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTCAAAAAAACAAAAAAAA	1132	False	NA	NA	False	NA	NA	NA	74545488	74565912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662
ES.746.13	chr1	+	2772	6	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	271	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	420.206330271213	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTTTTA	1133	False	NA	35	True	AATAAA	-20	NA	74545489	74569998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545621_74556228_74556409_74558059_74558176_74566150_74566250_74566750_74566843_74567844
ES.746.15	chr1	+	4320	8	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	363.728593591318	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	1138	False	NA	38	True	AATAAA	-23	NA	74545494	74570001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74564103_74566150_74566250_74566750_74566843_74567844
ES.746.16	chr1	+	2934	8	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	279	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	359.385984304182	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTTTAAATT	1141	False	NA	39	True	AATAAA	-24	NA	74545497	74570002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562716_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.17	chr1	+	3888	8	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	310	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	358.932885546213	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTG	1172	False	NA	29	True	AATAAA	-14	NA	74545528	74569992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74546562_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.18	chr1	+	2863	7	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	11011	2	-6458	-2	3prime_fragment	FALSE	canonical	3	963	junction_4	48.0326856306088	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTTTGTTTTTAA	NA	False	NA	36	True	AATAAA	-21	NA	74556227	74569999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.19	chr1	+	2808	7	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-6377	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	381.089119060971	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTTAATTGGAGAG	NA	False	NA	54	True	AATAAA	-39	NA	74556308	74570017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74556409_74558059_74558176_74561476_74561595_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.2	chr1	+	3311	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	-17	-26	-17	26	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGTTTATTCTGT	843	False	NA	64	True	NA	NA	NA	74545199	74570027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.20	chr1	+	3367	2	ISM	ENSMUSG00000026174.10	ENSMUST00000137100.2	831	7	16255	330	-1212	-330	intron_retention	FALSE	canonical	3	1034	junction_1	0	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74561473	74565916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74561587_74562662
ES.746.21	chr1	+	3783	1	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-552	-330	mono-exon	FALSE	NA	NA	NA	NA	NA	670	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74562133	74565916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74562100_74565900
ES.746.3	chr1	+	3336	9	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-8	-4	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	447.666100458813	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTGTTTTT	852	False	NA	34	True	AATAAA	-19	NA	74545208	74569997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74564188_74564253_74566150_74566250_74566750_74566843_74567844
ES.746.4	chr1	+	1890	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	-8	1386	-8	1279	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCTCTGACAGACCGAT	852	False	NA	18	True	AATAAA	-20	NA	74545208	74568615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.5	chr1	+	3212	8	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_3	355.427882406314	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTGTTTTTAAA	859	False	NA	37	True	AATAAA	-22	NA	74545215	74570000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561532_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ES.746.6	chr1	+	2904	7	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	477.902855075055	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	861	False	NA	32	True	AATAAA	-17	NA	74545217	74569995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74566150_74566250_74566750_74566843_74567844
ES.746.7	chr1	+	3147	7	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	381.836243259682	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTTTTA	868	False	NA	35	True	AATAAA	-20	NA	74545224	74569998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74566150_74566250_74566750_74566843_74567844
ES.746.8	chr1	+	2622	9	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	255	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	341.195668751818	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	1117	False	NA	30	True	AATAAA	-15	NA	74545473	74569993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844_74568857_74569237
ES.746.9	chr1	+	3691	4	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	257	-334	intron_retention	FALSE	canonical	0	0	junction_3	510.753908996843	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTCAAAAAAACAAAAAAAA	1119	False	NA	NA	False	NA	NA	NA	74545475	74565912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74545621_74556228_74556409_74558059_74558176_74562662
ES.7460.1	chr12	+	176	1	Intergenic	novelGene_6131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37059651	37059827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_37059700_37059800
ES.7461.1	chr12	+	215	1	Intergenic	novelGene_6132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTTTTAAACAGGACAG	3557	False	NA	NA	False	NA	NA	NA	37112224	37112439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_37112200_37112400
ES.7462.1	chr12	-	1367	1	Intergenic	novelGene_6133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCATGCTCAATCCAGCC	NA	False	NA	NA	False	ATTAAA	-11	NA	38096632	38095265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_38095300_38096600
ES.7463.1	chr12	+	6244	15	NNC	ENSMUSG00000004151.18	novel	1474	11	NA	NA	-49065	939	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.86655280673971	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATGTGTGTGACTGGAC	7	True	NA	NA	False	AATAAA	-8	NA	38780313	38921422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38780406_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546_38918295_38918390_38920474_38921400
ES.7463.10	chr12	+	3083	12	ISM	ENSMUSG00000004151.18	ENSMUST00000162563.8	1865	14	510	-1498	-54	-22	3prime_fragment	FALSE	non_canonical	0	0	junction_7	7.20881003694509	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTTCTGCCTTGTTT	1037	False	NA	NA	False	NA	NA	NA	38830792	38917276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ES.7463.11	chr12	+	3099	12	NIC	ENSMUSG00000004151.18	novel	3605	11	NA	NA	-12	-22	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	6.48711373633137	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTTTCTGCCTTGTTT	1344	False	NA	NA	False	NA	NA	NA	38831099	38917276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_38831302_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ES.7463.12	chr12	+	5865	10	NNC	ENSMUSG00000004151.18	novel	3981	10	NA	NA	9660	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	7.1509301820907	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGGGTTGTCGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	38843167	38920478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546_38918299_38918398
ES.7463.13	chr12	+	2786	2	NNC	ENSMUSG00000004151.18	novel	3981	10	NA	NA	30196	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTGGGTTGTCGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	38917592	38920478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38918295_38918394
ES.7463.2	chr12	+	1106	2	Antisense	novelGene_ENSMUSG00000113520.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCAGTCGTGATTTT	18	True	NA	NA	False	CATAAA	-11	NA	38780324	38792424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_38780406_38791399
ES.7463.3	chr12	+	2715	1	Intergenic	novelGene_6134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGTTACACAAAAGTTTAT	NA	False	NA	NA	False	AAGAAA	-8	NA	38800042	38802757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_38800000_38802800
ES.7463.4	chr12	+	3821	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	-442	3197	260	-12	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTTCATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	38829638	38917286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ES.7463.5	chr12	+	1832	13	NNC	ENSMUSG00000004151.18	novel	6576	13	NA	NA	-16	-37	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.45914800020008	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTATGGTCTGCCATGG	511	False	NA	NA	False	AATACA	-24	NA	38830266	38915923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902287_38904158_38904228_38906939_38907110_38911285_38911391_38915546
ES.7463.6	chr12	+	4086	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	209	2281	7	0	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAACAGATTTTATGT	534	False	NA	NA	False	CATAAA	-4	NA	38830289	38918202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ES.7463.7	chr12	+	5340	13	NNC	ENSMUSG00000004151.18	novel	6576	13	NA	NA	-15	-860	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8.46397595039641	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATTTCTTTTTATACT	547	False	NA	NA	False	AATAAA	-44	NA	38830302	38919623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546_38918299_38918398
ES.7463.8	chr12	+	4326	14	NNC	ENSMUSG00000004151.18	novel	1865	14	NA	NA	-3	365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.63052108777677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTAGTGTTTGATGTCTC	559	False	NA	NA	False	AGTAAA	-45	NA	38830314	38918567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546_38918299_38918398
ES.7463.9	chr12	+	6240	14	NNC	ENSMUSG00000004151.18	novel	1865	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	7.63052108777677	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGTTGTCGTGATCAC	564	False	NA	NA	False	AATAAA	-18	NA	38830319	38920482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546_38918299_38918394
ES.7464.1	chr12	-	3518	1	Intergenic	novelGene_6135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAGGCAAAGAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	38846784	38843266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_38843300_38846800
ES.7465.1	chr12	-	3970	1	Intergenic	novelGene_6136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAGGATTTCAAAATAA	NA	False	NA	NA	False	NA	NA	NA	39277792	39273822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_39273800_39277800
ES.7466.1	chr12	+	188	1	Intergenic	novelGene_6137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGACAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	39492423	39492611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_39492400_39492600
ES.7467.1	chr12	-	3841	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	54	-2695	54	164	multi-exon	FALSE	canonical	3	220	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATAGTATTGATGTA	NA	False	NA	NA	False	ATTAAA	-26	NA	40087970	40083125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7467.2	chr12	-	3881	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	-150	-2531	-150	0	multi-exon	FALSE	canonical	3	220	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40088174	40083289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7467.3	chr12	-	3716	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	-7	1	-7	-1	multi-exon	FALSE	canonical	3	67	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGCGTTAGACTATCA	NA	False	NA	-1	True	AATAAA	-15	NA	40087435	40083290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087261
ES.7467.4	chr12	-	3002	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	39	-1841	39	-690	multi-exon	FALSE	canonical	3	220	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTGTCTTTTTAAAG	NA	False	NA	NA	False	AAAAAG	-15	NA	40087985	40083979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7467.5	chr12	-	2040	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	40	1630	-13	901	multi-exon	FALSE	canonical	3	67	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAATT	NA	False	NA	NA	False	NA	NA	NA	40087388	40084919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087261
ES.7467.6	chr12	-	2063	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	38	-901	38	901	multi-exon	FALSE	canonical	3	220	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAAATGAAATT	NA	False	NA	NA	False	NA	NA	NA	40087986	40084919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7467.7	chr12	-	1213	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	-9	-4	-9	4	multi-exon	FALSE	canonical	3	220	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTGTTTTGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-19	NA	40088033	40085816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7467.8	chr12	-	948	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	72	180	72	-180	multi-exon	FALSE	canonical	3	220	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTTGCCTTGTGGAA	NA	False	NA	NA	False	ATTAAA	-30	NA	40087952	40086000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40086833_40087836
ES.7468.1	chr12	+	1130	1	Genic_Genomic	ENSMUSG00000090387.2	novel	NA	NA	NA	NA	1352	32	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGGAATATGCCACAAG	1823	False	NA	NA	False	NA	NA	NA	40250006	40251136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_40250000_40251100
ES.7469.1	chr12	-	3375	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	5	-2	1	2	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGAGGTTTGCTTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	40273183	40251563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.10	chr12	-	3634	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	243	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	190.448491984509	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40272718	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40270578
ES.7469.11	chr12	-	1970	13	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.701032039354	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273183	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263350_40263511_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.12	chr12	-	2168	10	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	1	intron_retention	FALSE	canonical	2	3	junction_3	206.176299963567	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273183	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40254014_40254295_40254425_40256987_40257123_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.13	chr12	-	1862	13	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.701032039354	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273184	40253129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263789_40263842_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.14	chr12	-	2527	11	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	551	junction_10	50.175292724607	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273183	40253129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.15	chr12	-	2110	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	187.81765378787	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273183	40253129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253616_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.16	chr12	-	1937	2	ISM	ENSMUSG00000001627.13	ENSMUST00000170119.8	574	3	-892	-189	-892	0	intron_retention	FALSE	canonical	3	692	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40255533	40253129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_40253451_40253917
ES.7469.17	chr12	-	1848	13	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	277.93568150843	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273183	40253129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263220_40263259_40263789_40263842_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.18	chr12	-	1802	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	187.647154376118	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTGTGTAGTGAGCAG	NA	False	NA	-4	True	AATAAA	-20	NA	40273183	40253130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256993_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.19	chr12	-	3636	1	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	-2648	-2156	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGATGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	40259709	40256073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40256100_40259700
ES.7469.2	chr12	-	2838	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	5	535	1	-535	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTTTTTATCACAGT	NA	False	NA	NA	False	NA	NA	NA	40273183	40252100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.20	chr12	-	2178	9	ISM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	4	4508	0	-2156	5prime_fragment	FALSE	canonical	3	551	junction_8	46.5913082022817	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGACTTGATGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	40273184	40256073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.21	chr12	-	2842	4	NIC	ENSMUSG00000001627.13	novel	1293	11	NA	NA	1236	-2186	intron_retention	FALSE	canonical	3	559	junction_1	44.8998886412873	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40266276	40256103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40257123_40262308_40263117_40263207_40264135_40266188
ES.7469.22	chr12	-	5617	1	FSM	ENSMUSG00000089371.3	ENSMUST00000158746.3	100	1	-373	-5144	-373	5144	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40273183	40267566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40267600_40273200
ES.7469.3	chr12	-	1843	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	-28	1563	-28	1	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273216	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.4	chr12	-	1596	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	-14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	188.037362209687	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40272975	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267236_40267376_40267482_40272867
ES.7469.5	chr12	-	2278	11	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	0	1	intron_retention	FALSE	canonical	3	551	junction_10	47.6769336262306	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273184	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.6	chr12	-	1768	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	250.949041615232	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273183	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257087_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267236_40267376_40267482_40272867
ES.7469.8	chr12	-	1701	11	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	198.773640103511	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273183	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.7469.9	chr12	-	1790	12	NNC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	190.514353811634	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTGTAGTGAGCAGAT	NA	False	NA	-2	True	AATAAA	-22	NA	40273183	40253128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262957_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ES.747.1	chr1	-	7335	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-152	3	combination_of_known_junctions	TRUE	canonical	3	147	junction_23	24.5588861491903	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGATTTATTTGTTT	NA	False	NA	2	True	ATTAAA	-19	NA	74545117	74474666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.10	chr1	-	6955	23	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-5	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	50.3069093064456	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544970	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.13	chr1	-	7194	25	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	61.8896307057078	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544962	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480757_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539280_74544818
ES.747.18	chr1	-	7173	26	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	68.8520268401737	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74545415	74474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74545308
ES.747.19	chr1	-	7089	24	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	65.4010746632481	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74544980	74474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480757_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.2	chr1	-	7101	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	49.8021036444266	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544960	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.21	chr1	-	7197	25	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	40.708994365155	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74545018	74474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.22	chr1	-	7446	24	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-345	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_23	57.397101156522	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74545787	74474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
ES.747.25	chr1	-	7320	25	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_23	68.5638262051418	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74545015	74474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535252_74539114_74539260_74544818
ES.747.27	chr1	-	7535	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	104	-1	intron_retention	FALSE	canonical	3	147	junction_22	24.9415952938741	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTAGTTTGATTTATTT	NA	False	NA	-2	True	ATTAAA	-15	NA	74544840	74474670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.28	chr1	-	7242	26	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-30	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	59.3845232362777	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTAGTTTGATTTATTT	NA	False	NA	-2	True	ATTAAA	-15	NA	74544995	74474670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74544818
ES.747.3	chr1	-	7499	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-331	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_24	45.4335404434017	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74545773	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
ES.747.31	chr1	-	6406	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-15	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	57.7558919553283	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74544980	74474671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74477887_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.32	chr1	-	8541	22	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-24	-2	intron_retention	FALSE	canonical	1	6	junction_2	50.3135745332502	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74544989	74474671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74479258_74480690_74480761_74489653_74489715_74491845_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.35	chr1	-	7686	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	3	-2	intron_retention	FALSE	canonical	3	6	junction_23	60.3612820854561	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74544959	74474671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74544818
ES.747.39	chr1	-	7433	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-351	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	60.0058880212786	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGTTTGATTTATT	NA	False	NA	-3	True	ATTAAA	-14	NA	74545793	74474671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74534930_74539114_74539260_74545308
ES.747.4	chr1	-	7170	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-58	-1	-55	1	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74545020	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.41	chr1	-	5969	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-20	988	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTACTTTCTATG	NA	False	NA	NA	False	AGTAAA	-31	NA	74544985	74475900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.42	chr1	-	5957	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	5683	985	combination_of_known_junctions	FALSE	canonical	3	6	junction_24	60.6064261352613	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTCTTACTTTCT	5030	False	NA	NA	False	AGTAAA	-28	NA	74539261	74475903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535252_74539114
ES.747.43	chr1	-	5979	23	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-293	969	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	63.4156073549591	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTCTGATTCCAAAT	NA	False	NA	NA	False	AGTAAA	-12	NA	74545735	74475919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
ES.747.44	chr1	-	5687	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	1	1423	1	796	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCCATGTTATGCAGAG	NA	False	NA	NA	False	AATAAA	-25	NA	74544961	74476092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.45	chr1	-	5771	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-50	796	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	40.708994365155	439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCCATGTTATGCAGAG	NA	False	NA	NA	False	AATAAA	-25	NA	74545015	74476092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.46	chr1	-	5785	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-28	796	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCCATGTTATGCAGAG	NA	False	NA	NA	False	AATAAA	-25	NA	74544993	74476092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.47	chr1	-	5447	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-14	1678	-11	541	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGATCAAAGAATTGG	NA	False	NA	NA	False	AGTAAA	-19	NA	74544976	74476347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.48	chr1	-	5337	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	57	537	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	47.1925723910966	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATACTGTGATCAAAGAA	NA	False	NA	NA	False	AGTAAA	-15	NA	74544887	74476351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74534930_74539114_74539260_74544818
ES.747.49	chr1	-	5406	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	16	1	intron_retention	FALSE	canonical	3	147	junction_22	24.9415952938741	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTCTCCTTTTGTCTT	NA	False	NA	0	True	TTTAAA	-33	NA	74544928	74476887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.50	chr1	-	5107	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-145	1	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTCTCCTTTTGTCTT	NA	False	NA	0	True	TTTAAA	-33	NA	74545110	74476887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.51	chr1	-	5185	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-303	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_23	57.397101156522	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGAGTCTCCTTTTGTCT	NA	False	NA	-1	True	TTTAAA	-32	NA	74545745	74476888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
ES.747.52	chr1	-	4883	24	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_18	49.8021036444266	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGAGTCTCCTTTTGTCT	NA	False	NA	-1	True	TTTAAA	-32	NA	74544962	74476888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.53	chr1	-	5743	9	NIC	ENSMUSG00000033364.14	novel	1836	12	NA	NA	5842	-1	intron_retention	FALSE	canonical	3	161	junction_8	23.3127513391277	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGAGTCTCCTTTTGTC	4924	False	NA	-2	True	TTTAAA	-31	NA	74500891	74476889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724
ES.747.54	chr1	-	4785	23	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-17	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	65.0356069033668	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGAGTCTCCTTTTGT	NA	False	NA	-3	True	TTTAAA	-30	NA	74544982	74476890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.55	chr1	-	5000	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-112	2223	-109	-4	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAGCAGGAGTCTCCTTTT	NA	False	NA	-5	True	TTTAAA	-28	NA	74545074	74476892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.56	chr1	-	4879	24	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-28	-8	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_8	53.6487913809357	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCGAGCAGGAGTCTCC	NA	False	NA	-9	True	TTTAAA	-24	NA	74544993	74476896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.57	chr1	-	2452	9	ISM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	44114	2591	5885	-372	3prime_fragment	FALSE	canonical	3	36	junction_8	64.0346585842386	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTCTTCTATTATTAA	4967	False	NA	NA	False	NA	NA	NA	74500848	74477260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724
ES.747.58	chr1	-	4078	26	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-56	425	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	59.3845232362777	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGTGTTCCAGCCCCAC	NA	False	NA	94	True	NA	NA	NA	74545021	74477860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74544818
ES.747.59	chr1	-	3934	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-44	326	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATTTCTGTAGCCTGA	NA	False	NA	-5	True	ACTAAA	-22	NA	74545009	74477959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.60	chr1	-	3941	25	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	0	326	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_23	74.234694924648	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATTTCTGTAGCCTGA	NA	False	NA	-5	True	ACTAAA	-22	NA	74544962	74477959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535252_74539114_74539260_74544818
ES.747.61	chr1	-	3874	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-53	3290	-50	326	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATTTCTGTAGCCTGA	NA	False	NA	-5	True	ACTAAA	-22	NA	74545015	74477959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.62	chr1	-	3791	24	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-3	326	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_8	53.6487913809357	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATTTCTGTAGCCTGA	NA	False	NA	-5	True	ACTAAA	-22	NA	74544968	74477959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.63	chr1	-	3849	25	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	0	324	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	40.708994365155	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTATTTCTGTAGCCT	NA	False	NA	-7	True	ACTAAA	-20	NA	74544962	74477961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.64	chr1	-	3938	26	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-17	324	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	59.3845232362777	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTATTTCTGTAGCCT	NA	False	NA	-7	True	ACTAAA	-20	NA	74544982	74477961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535129_74539114_74539260_74544818
ES.747.65	chr1	-	3531	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-18	3598	-15	18	multi-exon	FALSE	canonical	3	36	junction_8	42.9588980155981	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACTGAATGAATGGAG	NA	False	NA	NA	False	AATATA	-19	NA	74544980	74478267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.66	chr1	-	3563	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-6	-7	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATATGTACATACCC	NA	False	NA	NA	False	AATACA	-7	NA	74544971	74478292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.67	chr1	-	3395	23	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	-24	-52	combination_of_known_splicesites	FALSE	canonical	1	1	junction_17	61.467134939624	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGAGTGCCGCTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	74544989	74478337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.68	chr1	-	5431	7	NIC	ENSMUSG00000033364.14	novel	1836	12	NA	NA	5554	-1118	intron_retention	FALSE	canonical	3	161	junction_6	23.2695556945598	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAGAAAGAGAGAA	4636	False	NA	NA	False	NA	NA	NA	74501179	74479403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724
ES.747.69	chr1	-	3596	16	ISM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	-48	24699	-45	-10708	5prime_fragment	FALSE	canonical	3	147	junction_14	24.901584063848	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCTTCTCATGTGTTA	NA	False	NA	NA	False	AATAAA	-22	NA	74545010	74499368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.7	chr1	-	7016	24	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_22	69.5117185589109	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74545439	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74534930_74539114_74539260_74545308
ES.747.70	chr1	-	3257	17	NNC	ENSMUSG00000033364.14	novel	584	4	NA	NA	-19	-10710	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.5529342740056	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTTCTTCTCATGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	74544984	74499370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74500414_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ES.747.71	chr1	-	2258	8	NNC	ENSMUSG00000033364.14	novel	279	2	NA	NA	14456	-6098	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGCGGTTGCGCGTGA	NA	False	NA	NA	False	NA	NA	NA	74568987	74545212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74545620_74556227_74556406_74558057_74558173_74561473_74561586_74562661_74562776_74566152_74566248_74566748_74566841_74567842
ES.747.72	chr1	-	579	1	Antisense	novelGene_ENSMUSG00000026174.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	74568987	74568408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74568400_74569000
ES.747.8	chr1	-	7094	25	NNC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_23	47.1925723910966	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544961	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74534930_74539114_74539260_74544818
ES.747.9	chr1	-	7370	26	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-33	1	combination_of_known_junctions	FALSE	canonical	3	6	junction_24	59.3845232362777	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTGATTTATTTGT	NA	False	NA	0	True	ATTAAA	-17	NA	74544998	74474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74535095_74535252_74539114_74539260_74544818
ES.7470.1	chr12	-	183	1	Intergenic	novelGene_6138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATGTGCACCATTT	NA	False	NA	NA	False	NA	NA	NA	40305486	40305303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_40305300_40305500
ES.7471.1	chr12	+	176	1	Intergenic	novelGene_6139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATATGAGGCT	NA	False	NA	NA	False	NA	NA	NA	40340233	40340409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_40340200_40340400
ES.7472.1	chr12	-	1862	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	117	209	-11	-209	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACAGCGTTATTGTTTCC	NA	False	NA	NA	False	AATATA	-17	NA	40495784	40365253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.10	chr12	-	3650	12	NNC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	9	-516	intron_retention	FALSE	canonical	1	1	junction_5	170.213380911497	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACTTGGACTGAAGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	40495764	40365560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40372597_40375674_40375959_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.11	chr12	-	1340	11	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	2	-516	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	131.85071103335	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATACTTGGACTGAAGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	40495771	40365560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40495664
ES.7472.12	chr12	-	4498	1	FSM	ENSMUSG00000055917.16	ENSMUST00000221604.2	3080	1	-1406	-12	-1406	12	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAACTGGACATAGAG	NA	False	NA	NA	False	NA	NA	NA	40374246	40369748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40369700_40374200
ES.7472.13	chr12	-	1385	9	NNC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-19	-2344	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	179.37809230784	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGATTTCTTCATATTC	NA	False	NA	NA	False	AGTAAA	-21	NA	40495792	40372104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40444770_40444826_40495664
ES.7472.14	chr12	-	1134	9	NNC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-10	2127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	179.37809230784	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCACTAAAGATACTT	NA	False	NA	NA	False	AATAAA	-15	NA	40495783	40372346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40444770_40444826_40495664
ES.7472.15	chr12	-	1085	8	ISM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	110	7304	-18	2125	5prime_fragment	FALSE	canonical	3	359	junction_2	44.603010788831	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCACTAAAGATAC	NA	False	NA	NA	False	AATAAA	-13	NA	40495791	40372348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.16	chr12	-	814	2	NNC	ENSMUSG00000055917.16	novel	2438	13	NA	NA	69	-51330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTATGCTTTATTTAC	NA	False	NA	NA	False	AATAAA	-11	NA	40495704	40461831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40462606_40495664
ES.7472.17	chr12	-	7919	1	Intergenic	novelGene_6140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	40481675	40473756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_40473800_40481700
ES.7472.2	chr12	-	3408	11	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-13	-496	intron_retention	FALSE	canonical	3	359	junction_5	47.5736271478221	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCATTATCTTGGATG	NA	False	NA	NA	False	AATAAA	-32	NA	40495786	40365540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.3	chr12	-	1680	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	7	501	7	-501	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTGTCATTATCTT	NA	False	NA	NA	False	AATAAA	-27	NA	40495894	40365545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.4	chr12	-	1925	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	9	504	9	-504	multi-exon	FALSE	canonical	2	4	junction_11	159.233493824495	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	40495764	40365548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
ES.7472.5	chr12	-	6439	2	ISM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	122596	507	-337	-507	intron_retention	FALSE	canonical	3	497	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGAAGAAACTTTGTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	40373177	40365551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_40365903_40367089
ES.7472.7	chr12	-	1390	10	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-7	-512	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	141.778996859963	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGACTGAAGAAACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	40495780	40365556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ES.7472.8	chr12	-	1462	12	NNC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-13	-514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	126.789341784247	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGGACTGAAGAAACT	NA	False	NA	NA	False	AATAAA	-14	NA	40495786	40365558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495761
ES.7472.9	chr12	-	5236	8	NIC	ENSMUSG00000055917.16	novel	2188	12	NA	NA	-7	-514	intron_retention	FALSE	canonical	0	0	junction_6	160.482690273908	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGGACTGAAGAAACT	NA	False	NA	NA	False	AATAAA	-14	NA	40495780	40365558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_40365903_40367089_40367265_40368533_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40428671_40428874_40495664
ES.7473.1	chr12	+	8483	52	NIC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	37	-5	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	3.40341552215641	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTTTCTGCCTTTAT	NA	False	NA	12	True	AATAAA	-15	NA	40495987	40896868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7473.10	chr12	+	8903	52	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	21	529	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_51	3.7499711648257	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACAGCATTTTGGATCC	NA	False	NA	NA	False	ATTAAA	-15	NA	40496107	40897402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891304_40894208
ES.7473.11	chr12	+	8649	52	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	-35	533	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	4.11241497658476	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCATTTTGGATCCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	40496299	40897406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787372_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883181_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7473.12	chr12	+	4100	32	NNC	ENSMUSG00000035954.11	novel	2195	8	NA	NA	13666	432	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.32811393557679	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAGTTCTAGGAAGGG	5816	False	NA	NA	False	NA	NA	NA	40510000	40840752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40510145_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074
ES.7473.13	chr12	+	7126	41	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	-100000	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.94936703789354	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTAATGTTTCTGCCTT	8325	False	NA	9	True	AATAAA	-12	NA	40726701	40896865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775652_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7473.15	chr12	+	4518	18	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	5468	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	4.015540744912	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTTTCTGCCTTTATT	NA	False	NA	13	True	AATAAA	-16	NA	40849700	40896869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891304_40894208
ES.7473.2	chr12	+	4694	39	NIC	ENSMUSG00000035954.11	novel	7360	52	NA	NA	-37	5190	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	3.59901494679553	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGAATTTTCTCCCT	NA	False	NA	NA	False	CATAAA	-5	NA	40495997	40866530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188
ES.7473.3	chr12	+	6505	52	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	-34	-1280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.73126487433899	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATTGTGAAAAAGACTC	NA	False	NA	NA	False	ATTAAA	-21	NA	40496000	40894899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40496394_40671219_40671308_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7473.4	chr12	+	8193	51	NIC	ENSMUSG00000035954.11	novel	7360	52	NA	NA	-34	-168	combination_of_known_splicesites	FALSE	canonical	2	4	junction_49	3.58976322338953	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTTTTTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	40496000	40896705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40891235_40891298_40894208
ES.7473.5	chr12	+	4141	30	NNC	ENSMUSG00000035954.11	novel	3880	32	NA	NA	-29	1568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.34291145487393	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCATAAAATCTCTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	40496005	40830323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686235_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644
ES.7473.6	chr12	+	8286	52	NIC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	-15	-170	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	3.40341552215641	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTTTTTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	40496019	40896703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7473.8	chr12	+	8315	51	NIC	ENSMUSG00000035954.11	novel	7360	52	NA	NA	6	-3	combination_of_known_splicesites	FALSE	canonical	2	4	junction_49	3.58976322338953	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTCTGCCTTTATTC	NA	False	NA	14	True	AATAAA	-17	NA	40496043	40896870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40891235_40891298_40894208
ES.7473.9	chr12	+	8368	52	NNC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	4.12268599245535	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCTTTATTCCAG	NA	False	NA	17	True	AATAAA	-20	NA	40496057	40896873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845701_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883181_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ES.7474.1	chr12	-	231	1	Intergenic	novelGene_6141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACGACAATAACATATAGC	NA	False	NA	NA	False	AAAAAG	-32	NA	40629484	40629253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_40629300_40629500
ES.7475.1	chr12	-	6115	1	Antisense	novelGene_ENSMUSG00000035954.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAAGGAATGTA	NA	False	NA	NA	False	NA	NA	NA	40685028	40678913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_40678900_40685000
ES.7476.1	chr12	+	207	2	Intergenic	novelGene_6142	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAGAACATCTTATTA	NA	False	NA	NA	False	CATAAA	-41	NA	40919041	40950207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_40919213_40950171
ES.7477.1	chr12	+	7025	1	Intergenic	novelGene_6143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACACT	NA	False	NA	NA	False	NA	NA	NA	41217968	41224993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41218000_41225000
ES.7477.2	chr12	+	2765	1	Intergenic	novelGene_6144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	AATACA	-28	NA	41218078	41220843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41218100_41220800
ES.7478.1	chr12	+	3093	2	Intergenic	novelGene_6145	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAGAAAGAAAGAAAAT	5133	False	NA	NA	False	NA	NA	NA	41268369	41271542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41271316_41271395
ES.7479.1	chr12	+	4548	1	Intergenic	novelGene_6146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAGAGAAAATGGATCAA	8341	False	NA	NA	False	NA	NA	NA	41271577	41276125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41271600_41276100
ES.748.1	chr1	+	175	1	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	74571778	74571953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74571800_74572000
ES.7480.1	chr12	-	4283	1	Intergenic	novelGene_6147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTGTCAGC	NA	False	NA	NA	False	NA	NA	NA	41311535	41307252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41307300_41311500
ES.7481.1	chr12	-	7560	1	Intergenic	novelGene_6148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTGAAGAAAAGAACAGAG	NA	False	NA	NA	False	NA	NA	NA	41320769	41313209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41313200_41320800
ES.7482.1	chr12	-	3450	1	Intergenic	novelGene_6149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAGAAAGGAAAATGCA	NA	False	NA	NA	False	NA	NA	NA	41449156	41445706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41445700_41449200
ES.7483.1	chr12	-	3975	1	Intergenic	novelGene_6150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGCTCA	NA	False	NA	NA	False	NA	NA	NA	41565215	41561240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41561200_41565200
ES.7484.1	chr12	-	176	1	Intergenic	novelGene_6151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAAAAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	41670747	41670571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41670600_41670700
ES.7485.1	chr12	+	3514	1	Intergenic	novelGene_6152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTATTTAATTTAA	NA	False	NA	NA	False	NA	NA	NA	41689335	41692849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41689300_41692800
ES.7486.1	chr12	-	2367	1	Intergenic	novelGene_6153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGATTGCTAAACTGA	NA	False	NA	NA	False	NA	NA	NA	41781536	41779169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41779200_41781500
ES.7487.1	chr12	-	3765	1	Intergenic	novelGene_6154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-31	NA	41807567	41803802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41803800_41807600
ES.7488.1	chr12	-	157	1	Intergenic	novelGene_6155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATAAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	41809191	41809034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41809000_41809200
ES.7489.1	chr12	-	3765	1	Intergenic	novelGene_6156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-17	NA	41854575	41850810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_41850800_41854600
ES.749.1	chr1	+	177	1	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	74579549	74579726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74579500_74579700
ES.7490.1	chr12	+	6555	1	Intergenic	novelGene_6157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAATAAAGAGACACTTAA	NA	False	NA	NA	False	AATATA	-42	NA	41929503	41936058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_41929500_41936100
ES.7491.1	chr12	+	4947	1	Intergenic	novelGene_6158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTGGTGTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	42208519	42213466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_42208500_42213500
ES.7492.1	chr12	-	171	1	Intergenic	novelGene_6159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAACTGCTAGCTAG	NA	False	NA	NA	False	NA	NA	NA	42308214	42308043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_42308000_42308200
ES.7493.1	chr12	-	180	1	Intergenic	novelGene_6160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAATAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	42445178	42444998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_42445000_42445200
ES.7494.1	chr12	-	175	1	Intergenic	novelGene_6161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAATCTACTTCAA	NA	False	NA	NA	False	NA	NA	NA	42682629	42682454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_42682500_42682600
ES.7495.1	chr12	+	173	1	Intergenic	novelGene_6162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43189348	43189521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_43189300_43189500
ES.7496.1	chr12	-	901	2	Intergenic	novelGene_6163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGTTCTCCAATATT	NA	False	NA	NA	False	ATTAAA	-27	NA	43258751	43249509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_43250160_43258500
ES.7496.2	chr12	-	955	3	Intergenic	novelGene_6164	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGGACTTTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	43258723	43249627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_43250160_43255592_43255793_43258500
ES.7497.1	chr12	-	175	1	Intergenic	novelGene_6165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	43804768	43804593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_43804600_43804800
ES.7498.1	chr12	-	3247	4	NNC	ENSMUSG00000014905.5	novel	2461	3	NA	NA	2	1084	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	47.0177271533479	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGGATGAATTATTCT	NA	False	NA	NA	False	GATAAA	-26	NA	44256849	44251257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_44251776_44251813_44254189_44254869_44255097_44256722
ES.7498.2	chr12	-	2352	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	111	-2	111	2	multi-exon	FALSE	canonical	3	92	junction_1	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGCTTGGAATGATTC	NA	False	NA	NA	False	AATAAA	-18	NA	44256998	44252339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_44254189_44254869_44255097_44256722
ES.7498.3	chr12	-	2062	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	207	192	-51	-192	multi-exon	FALSE	canonical	3	92	junction_1	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTGTTACTATCTC	NA	False	NA	NA	False	NA	NA	NA	44256902	44252533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_44254189_44254869_44255097_44256722
ES.7498.4	chr12	-	1946	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	178	337	-80	-337	multi-exon	FALSE	canonical	3	92	junction_1	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCAGTGTTGTCATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	44256931	44252678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_44254189_44254869_44255097_44256722
ES.7498.5	chr12	-	4171	1	NIC	ENSMUSG00000014905.5	novel	2461	3	NA	NA	2	-337	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCAGTGTTGTCATTTT	NA	False	NA	NA	False	TATAAA	-14	NA	44256849	44252678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_44252700_44256800
ES.7498.6	chr12	-	1636	2	NIC	ENSMUSG00000014905.5	novel	2461	3	NA	NA	0	-340	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCTTCAGTGTTGTCAT	NA	False	NA	NA	False	TATAAA	-11	NA	44256851	44252681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_44254189_44256722
ES.7499.1	chr12	+	5690	1	FSM	ENSMUSG00000112795.2	ENSMUST00000217877.2	1629	1	-390	-3671	-390	3671	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAAGTGGTTGTGGA	NA	False	NA	NA	False	AATAAA	-12	NA	44268137	44273827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44268100_44273800
ES.75.1	chr1	-	174	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCTTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	9916072	9915898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_9915900_9916100
ES.750.1	chr1	+	3870	1	Antisense	novelGene_ENSMUSG00000026135.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGGCACCTGTAGCT	7723	False	NA	NA	False	ATTAAA	-34	NA	74609276	74613146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_74609300_74613100
ES.7500.10	chr12	+	4414	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	-2	9095	-2	944	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGTTGTCTGTAGAGG	NA	False	NA	NA	False	AATAAA	-33	NA	44315928	44360220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.11	chr12	+	3107	11	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	0	-61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.4512583287848	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACCAATTGTTCAAGG	NA	False	NA	2	True	AATAAA	-7	NA	44315930	44359065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107_44358827_44358976
ES.7500.13	chr12	+	3545	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	1	45	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCCGTTGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	44315931	44359321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
ES.7500.14	chr12	+	3299	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	1	-51	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAAGGCTAATGCCAT	NA	False	NA	12	True	AATAAA	-17	NA	44315931	44359075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
ES.7500.15	chr12	+	7519	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	2	5986	2	4053	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAAGATGGCTTAATAT	NA	False	NA	NA	False	AATAAA	-43	NA	44315932	44363329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.16	chr12	+	4299	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	6	9202	6	837	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAGTTGTACTAAAGTA	NA	False	NA	NA	False	AGTAAA	-23	NA	44315936	44360113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.18	chr12	+	4095	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	6	830	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	80.5059617453466	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAACTCATCAGTTGTAC	NA	False	NA	NA	False	ATTAAA	-39	NA	44315936	44360106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329557_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.19	chr12	+	3241	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	7	-58	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	86.2392594851278	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAATTGTTCAAGGCTA	NA	False	NA	5	True	AATAAA	-10	NA	44315937	44359068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329360_44330488_44330575_44330714_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.20	chr12	+	2874	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	7	10626	7	-186	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTTTACTCGTTT	NA	False	NA	NA	False	AATATA	-36	NA	44315937	44358689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.21	chr12	+	3663	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	9	9835	9	204	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTCTTCTCCTTTATT	NA	False	NA	NA	False	CATAAA	-24	NA	44315939	44359480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.24	chr12	+	4420	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	-7	931	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGCATCAAAACTCGGAG	NA	False	NA	NA	False	AATAAA	-20	NA	44315942	44360207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
ES.7500.25	chr12	+	3117	11	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	-3	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.959992520568	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGTTTTCTATTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	44315946	44358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44353435_44353488_44354701_44354898_44358107
ES.7500.26	chr12	+	3448	9	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	9	203	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	85.1952720225718	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTCTTCTCCTTTAT	NA	False	NA	NA	False	CATAAA	-23	NA	44315958	44359479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44354701_44354898_44358107
ES.7500.27	chr12	+	2703	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	82.9066111527875	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAGGTGTATATCCTT	NA	False	NA	NA	False	NA	NA	NA	44315963	44359277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44330093_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.28	chr12	+	2264	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	19	-56	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	80.8056653679404	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATTGTTCAAGGCTAAT	NA	False	NA	7	True	AATAAA	-12	NA	44315968	44359070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44330320_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.29	chr12	+	3048	9	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	19	-37	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	85.1952720225718	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTTTAACGTTTGTAT	NA	False	NA	26	True	AATAAA	-31	NA	44315968	44359089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44354701_44354898_44358107
ES.7500.3	chr12	+	3519	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	-14	10002	-14	37	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACAGTGCTGCTTCCGTT	NA	False	NA	NA	False	NA	NA	NA	44315916	44359313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.31	chr12	+	5629	11	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	21	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	125.541865527003	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATTGTTCAAGGCTAAT	NA	False	NA	7	True	AATAAA	-12	NA	44315970	44359070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44321932_44322135_44329360_44330489_44330575_44330726_44334953_44335106_44337348_44339545_44342577_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.33	chr12	+	3396	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	21	928	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	80.8056653679404	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAAGCATCAAAACTCG	NA	False	NA	NA	False	AATAAA	-17	NA	44315970	44360204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44330320_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.34	chr12	+	2844	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	21	14	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	80.5059617453466	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGTTTTCTATTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	44315970	44358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329557_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.35	chr12	+	2952	10	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	23	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.1094231446655	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGTTTTCTATTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	44315972	44358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329447_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.37	chr12	+	3620	11	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.664989370849	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGGTGTATATCCTTT	NA	False	NA	NA	False	NA	NA	NA	44315982	44359278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44321932_44322135_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.38	chr12	+	3370	11	NNC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	38	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	82.4512583287848	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCCGTTGTCATTGTG	NA	False	NA	NA	False	NA	NA	NA	44315987	44359322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107_44358205_44358291
ES.7500.4	chr12	+	3127	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	-13	14	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGTTTTCTATTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	44315917	44358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
ES.7500.7	chr12	+	3283	9	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	85.1952720225718	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAGGTGTATATCCTT	NA	False	NA	NA	False	NA	NA	NA	44315921	44359277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44354701_44354898_44358107
ES.7500.8	chr12	+	3284	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	-5	10228	-5	-39	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCATTTTAACGTTTGT	NA	False	NA	24	True	AATAAA	-29	NA	44315925	44359087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7500.9	chr12	+	3086	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	-5	10426	-5	14	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAGTTTTCTATTCAA	NA	False	NA	NA	False	ATTAAA	-29	NA	44315925	44358889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ES.7501.1	chr12	-	176	1	Intergenic	novelGene_6166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	44335449	44335273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_44335300_44335400
ES.7502.1	chr12	+	2812	13	NNC	ENSMUSG00000020598.17	novel	4176	25	NA	NA	-72	4611	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.44337567297406	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATAATTGATATGAATA	NA	False	NA	NA	False	AATAAA	-18	NA	44375595	44601402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44375880_44434682_44434839_44503407_44503486_44579240_44579443_44584033_44584140_44586223_44586421_44587734_44587858_44591507_44591679_44592161_44592219_44594014_44594127_44596656_44596842_44598087_44598220_44600393
ES.7502.2	chr12	+	4273	28	FSM	ENSMUSG00000020598.17	ENSMUST00000110748.4	6275	28	64	1938	16	-19	multi-exon	FALSE	canonical	0	0	junction_1	1.90371811494761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATACAACATCAT	NA	False	NA	NA	False	NA	NA	NA	44375732	44645605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44375880_44434682_44434839_44503407_44503486_44579240_44579443_44584033_44584140_44586223_44586421_44587734_44587858_44591507_44591679_44592161_44592219_44594014_44594127_44596656_44596842_44598087_44598220_44606444_44606589_44609209_44609322_44610746_44610914_44611009_44611158_44613070_44613196_44615326_44615429_44616992_44617191_44617288_44617360_44618297_44618524_44618984_44619101_44620602_44620808_44622658_44622782_44623386_44623573_44636890_44637023_44637763_44637843_44645132
ES.7502.3	chr12	+	4282	28	NIC	ENSMUSG00000020598.17	novel	4469	31	NA	NA	16	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.90371811494761	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAATAGATTACATTATTC	NA	False	NA	NA	False	ATTAAA	-16	NA	44375732	44645623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_44375880_44434682_44434839_44503407_44503486_44579240_44579443_44584033_44584140_44586223_44586421_44587734_44587858_44591507_44591679_44592161_44592219_44594014_44594127_44596656_44596842_44598087_44598220_44606444_44606589_44609209_44609322_44610746_44610914_44611009_44611158_44613070_44613196_44615326_44615429_44616992_44617191_44617288_44617360_44618297_44618524_44618984_44619101_44620602_44620808_44622658_44622782_44623386_44623564_44636890_44637023_44637763_44637843_44645132
ES.7502.4	chr12	+	3995	27	NNC	ENSMUSG00000020598.17	novel	4469	31	NA	NA	-7	6161	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.92615138854599	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCTCACAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-11	NA	44375758	44630343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_44375880_44434262_44434360_44434682_44434845_44503407_44503486_44579240_44579443_44584033_44584140_44586223_44586421_44587734_44587858_44591507_44591679_44592161_44592219_44594014_44594127_44596656_44596842_44598087_44598220_44606444_44606589_44609209_44609322_44610746_44610914_44611009_44611158_44613070_44613196_44615326_44615429_44616992_44617191_44617288_44617360_44618297_44618524_44618984_44619101_44620602_44620808_44622658_44622782_44623386_44623564_44630005
ES.7502.5	chr12	+	3157	1	FSM	ENSMUSG00000112448.2	ENSMUST00000218248.2	1680	1	-1477	0	-1477	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44455095	44458252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_44455100_44458300
ES.7503.1	chr12	+	172	1	Intergenic	novelGene_6167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACAATTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	44961435	44961607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_44961400_44961600
ES.7504.1	chr12	-	4303	6	FSM	ENSMUSG00000046314.17	ENSMUST00000053768.14	4553	6	250	0	-141	0	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTCTCTCCTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	45121242	44899266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
ES.7504.2	chr12	-	4274	7	NNC	ENSMUSG00000046314.17	novel	4553	6	NA	NA	-160	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.43932593411478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTGTTTCTCTCCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	45121261	44899268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_44902471_44902516_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
ES.7504.3	chr12	-	1621	6	FSM	ENSMUSG00000046314.17	ENSMUST00000053768.14	4553	6	245	2687	-146	-2683	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAAGTCTGTACTGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	45121247	44901953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
ES.7505.1	chr12	-	243	1	Intergenic	novelGene_6168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGATATACTGAAAAAA	NA	False	NA	NA	False	AGTAAA	-29	NA	45596958	45596715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_45596700_45597000
ES.7506.1	chr12	+	174	1	Intergenic	novelGene_6169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATAGGTTG	NA	False	NA	NA	False	NA	NA	NA	45660525	45660699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_45660500_45660700
ES.7507.1	chr12	-	5881	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	-415	1688	-415	-1688	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTAGATTTTAGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	46866127	46742987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
ES.7507.2	chr12	-	4221	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	-445	3378	-445	3180	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCCGTCTCATTTT	NA	False	NA	1	True	TATAAA	-27	NA	46866157	46744677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
ES.7507.3	chr12	-	4449	6	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-575	3176	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_3	6.37495098020369	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCTCCCGTCTCA	NA	False	NA	-3	True	TATAAA	-23	NA	46866287	46744681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_46747757_46760280_46760353_46767472_46767640_46813072_46813175_46863668_46863813_46865398
ES.7507.4	chr12	-	3476	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	158	3520	4	3038	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACTATTTATCGTCGA	NA	False	NA	NA	False	AGTAAA	-14	NA	46865554	46744819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
ES.7507.5	chr12	-	3848	3	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-218	-42640	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCTGCTACAAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	46865930	46810002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_46813175_46863668_46863813_46865398
ES.7507.6	chr12	-	3677	3	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	373	-42642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTGCTACAAGTGC	NA	False	NA	NA	False	NA	NA	NA	46865185	46810004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_46813175_46863668_46863813_46864822
ES.7507.7	chr12	-	657	1	Genic_Genomic	ENSMUSG00000021047.8	novel	NA	NA	NA	NA	-574	-98267	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCTTAGCAACCCC	NA	False	NA	NA	False	ATTAAA	-31	NA	46866286	46865629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_46865600_46866300
ES.7508.1	chr12	-	163	1	Intergenic	novelGene_6170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATGAAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	47197059	47196896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_47196900_47197100
ES.7509.1	chr12	-	202	1	Intergenic	novelGene_6171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCTCAGG	NA	False	NA	NA	False	NA	NA	NA	47333451	47333249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_47333200_47333500
ES.751.1	chr1	+	2127	3	Antisense	novelGene_ENSMUSG00000026135.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAGAGTTTCAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	74615446	74620128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_74615763_74617280_74617447_74618483
ES.7510.1	chr12	+	3524	1	Intergenic	novelGene_6172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTTTTTCAGTATGA	NA	False	NA	NA	False	AATAAA	-13	NA	47465933	47469457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_47465900_47469500
ES.7511.1	chr12	+	2506	1	Intergenic	novelGene_6173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTCAGTTTTAGTAGA	NA	False	NA	NA	False	ACTAAA	-35	NA	47648889	47651395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_47648900_47651400
ES.7512.1	chr12	+	178	1	Intergenic	novelGene_6174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1934	False	NA	NA	False	NA	NA	NA	47814938	47815116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_47814900_47815100
ES.7513.1	chr12	+	135	1	FSM	ENSMUSG00000112908.2	ENSMUST00000217815.2	345	1	303	-93	303	93	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAATGTGGTACATCTA	NA	False	NA	NA	False	AATAAA	-43	NA	47859990	47860125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_47860000_47860100
ES.7514.1	chr12	-	2588	1	Intergenic	novelGene_6175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAGGAGTGCAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	49100514	49097926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_49097900_49100500
ES.7515.1	chr12	+	175	1	Intergenic	novelGene_6176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	49328782	49328957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_49328800_49329000
ES.7516.1	chr12	+	2961	1	FSM	ENSMUSG00000020950.11	ENSMUST00000179669.3	3973	1	1016	-4	892	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGATATTTTTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	49430681	49433642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_49430700_49433600
ES.7516.2	chr12	+	2531	2	NNC	ENSMUSG00000020950.11	novel	2941	2	NA	NA	1138	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTGATATTTTTGTCT	NA	False	NA	NA	False	AATAAA	-20	NA	49430927	49433641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_49431545_49431727
ES.7517.1	chr12	-	3773	18	NIC	ENSMUSG00000002688.9	novel	3653	19	NA	NA	-141	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	4.97606729001332	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTCATACTAATCAAATT	NA	False	NA	-1	True	AATAAA	-17	NA	50696022	50388010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ES.7517.2	chr12	-	3783	19	FSM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	-133	3	-133	-3	multi-exon	FALSE	canonical	0	0	junction_18	5.99897110519693	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTGTCATACTAAT	NA	False	NA	-7	True	AATAAA	-11	NA	50696014	50388016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50466635_50466660_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ES.7517.4	chr12	-	2353	13	NNC	ENSMUSG00000002688.9	novel	3653	19	NA	NA	256094	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.84767985741633	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTGTCATACTAAT	NA	False	NA	-7	True	AATAAA	-11	NA	50439787	50388016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_50389004_50389836_50389923_50411294_50411373_50411506_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617
ES.7517.7	chr12	-	4263	17	NIC	ENSMUSG00000002688.9	novel	3653	19	NA	NA	-141	-491	intron_retention	FALSE	canonical	0	0	junction_16	5.10476187005819	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTGCAAATCAGTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	50696022	50388504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ES.7518.1	chr12	+	183	1	Intergenic	novelGene_6177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	50873572	50873755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_50873600_50873800
ES.7519.1	chr12	+	5321	1	Intergenic	novelGene_6178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	51022126	51027447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51022100_51027400
ES.7519.2	chr12	+	2220	1	Intergenic	novelGene_6179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTCAGAGACAATAT	NA	False	NA	NA	False	NA	NA	NA	51022207	51024427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51022200_51024400
ES.752.1	chr1	-	9250	3	ISM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	15186	-7866	15186	6124	3prime_fragment	FALSE	canonical	3	42	junction_2	6.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	74609636	74598161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74606507_74607709_74607816_74608837
ES.752.10	chr1	-	6275	10	NIC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	15	-17	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	16.1734426426033	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTGGATCCCTGTC	NA	False	NA	-3	True	NA	NA	NA	74627169	74605601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722_74626911_74627083
ES.752.12	chr1	-	6052	8	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	-23	-18	intron_retention	FALSE	canonical	2	5	junction_6	16.630436812406	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTTTGGATCCCTGT	NA	False	NA	-4	True	NA	NA	NA	74627377	74605602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626722
ES.752.13	chr1	-	6154	9	NNC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	-16	-18	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_7	15.708278072405	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTTTGGATCCCTGT	NA	False	NA	-4	True	NA	NA	NA	74627127	74605602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618836_74624542_74624857_74626722
ES.752.14	chr1	-	5856	9	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_7	17.5779513880315	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCCTTGTGTCTAGTG	NA	False	NA	-62	True	NA	NA	NA	74627157	74605660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618566_74624542_74624857_74626722
ES.752.15	chr1	-	6032	10	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_7	17.8512371186612	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCCTTGTGTCTAGTG	NA	False	NA	-62	True	NA	NA	NA	74627350	74605660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618778_74624542_74624857_74626722_74626911_74627139
ES.752.16	chr1	-	6171	10	NIC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	14.8457085290125	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTCCTTGTGTCTAG	NA	False	NA	-64	True	NA	NA	NA	74627182	74605662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722_74626911_74627139
ES.752.19	chr1	-	5646	9	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	17.5779513880315	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627128	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618566_74624542_74624857_74626722
ES.752.2	chr1	-	4227	1	Antisense	novelGene_ENSMUSG00000026173.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCACACTAAAGAGCTA	NA	False	NA	NA	False	AATAAA	-28	NA	74603556	74599329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74599300_74603600
ES.752.20	chr1	-	6118	10	NIC	ENSMUSG00000026135.18	novel	5902	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	14.8457085290125	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627308	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722_74626911_74627139
ES.752.21	chr1	-	5601	9	NIC	ENSMUSG00000026135.18	novel	5902	10	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	19.7922806922295	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627338	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626722_74626911_74627083
ES.752.22	chr1	-	5971	8	NIC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.5689653341691	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627110	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ES.752.23	chr1	-	6422	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-199	257	22	0	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627383	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ES.752.24	chr1	-	5785	10	NIC	ENSMUSG00000026135.18	novel	5902	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_7	17.8512371186612	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627284	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618778_74624542_74624857_74626722_74626911_74627139
ES.752.25	chr1	-	3129	9	NNC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3331625675889	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74626986	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74606507_74607709_74607816_74611482_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618836_74624542_74624857_74626722
ES.752.26	chr1	-	5976	9	NNC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7	junction_7	15.708278072405	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627188	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618836_74624542_74624857_74626722
ES.752.27	chr1	-	6470	7	ISM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	4713	-186	4713	0	3prime_fragment	FALSE	canonical	3	27	junction_6	9.95685135416256	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74620109	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483
ES.752.28	chr1	-	5899	10	NNC	ENSMUSG00000026135.18	novel	6480	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.1168821436904	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGACTTCTTGAGTAGTA	NA	False	NA	NA	False	TATAAA	-20	NA	74627184	74605841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722_74626816_74627139
ES.752.3	chr1	-	5755	4	ISM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	12040	-2180	12040	438	3prime_fragment	FALSE	canonical	3	42	junction_2	6.64997911442	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAGAACTTTTCCCAAT	NA	False	NA	NA	False	NA	NA	NA	74612782	74603847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697
ES.752.4	chr1	-	7843	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-65	-1298	43	-1	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGCTATAATCCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	74627249	74604286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ES.752.7	chr1	-	6701	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	-236	15	-15	-15	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGGATCCCTGTCCT	NA	False	NA	-1	True	NA	NA	NA	74627420	74605599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ES.752.8	chr1	-	2775	7	NNC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	190	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.420228961067	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTGGATCCCTGTCC	NA	False	NA	-2	True	NA	NA	NA	74626921	74605600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74606507_74607709_74607816_74611482_74611743_74614938_74615764_74617281_74617447_74624542_74624857_74626722
ES.752.9	chr1	-	5621	8	NIC	ENSMUSG00000026135.18	novel	7473	9	NA	NA	16	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	20.760047972891	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTGGATCCCTGTCC	NA	False	NA	-2	True	NA	NA	NA	74627338	74605600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74624542_74624857_74626722_74626911_74627139
ES.7520.1	chr12	+	158	1	Intergenic	novelGene_6180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	51263094	51263252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51263100_51263300
ES.7521.1	chr12	+	6536	15	NNC	ENSMUSG00000035293.14	novel	616	4	NA	NA	-59030	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.3276874825545	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTGAGATTTATTTCAT	NA	False	NA	18	True	AATAAA	-19	NA	51335813	51423770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51335930_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.10	chr12	+	3650	16	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	53.3504139315401	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCTCATAAATCAGAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	51394897	51420050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51411486_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.11	chr12	+	3306	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-51	-107	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	42.4542914662973	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACATCACTCTCTTGTAA	NA	False	NA	NA	False	AATAAA	-31	NA	51395019	51420753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.12	chr12	+	3591	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	196	3016	-31	-107	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACATCACTCTCTTGTAA	NA	False	NA	NA	False	AATAAA	-31	NA	51395039	51420753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.13	chr12	+	4593	14	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	-29	3	intron_retention	FALSE	canonical	2	3	junction_11	44.5723930797088	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAAATCAGAGATATT	NA	False	NA	NA	False	AATAAA	-21	NA	51395041	51420053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51412343_51414557_51414740_51415832_51416002_51418342_51418534_51419212
ES.7521.14	chr12	+	4911	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	210	1682	-17	1227	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAATTTATATTATC	NA	False	NA	NA	False	ATTAAA	-17	NA	51395053	51422087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.15	chr12	+	2829	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	44.4363782949998	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTCATAAATCAGAGATA	NA	False	NA	NA	False	AATAAA	-19	NA	51395058	51420051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.17	chr12	+	2730	15	NIC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	55.3529030634439	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCTAGAACCTATG	NA	False	NA	NA	False	ATTAAA	-40	NA	51395064	51420153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.18	chr12	+	6542	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-6	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	44.4363782949998	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTGAGATTTATTTCAT	NA	False	NA	18	True	AATAAA	-19	NA	51395064	51423770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.19	chr12	+	2661	14	NIC	ENSMUSG00000035293.14	novel	2594	14	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	42.4542914662973	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCTAGAACCTATG	NA	False	NA	NA	False	ATTAAA	-40	NA	51395064	51420153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.2	chr12	+	179	1	Intergenic	novelGene_6181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGTAAAATGCTACA	NA	False	NA	NA	False	NA	NA	NA	51346272	51346451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51346300_51346500
ES.7521.20	chr12	+	2956	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	44.3906590652234	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTAGAACCTATGTGTC	NA	False	NA	NA	False	ATTAAA	-44	NA	51395068	51420157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418352_51418534_51419212
ES.7521.21	chr12	+	4657	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	225	1921	-2	988	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGGTCTCTGTTGTCTG	NA	False	NA	NA	False	AGTAAA	-12	NA	51395068	51421848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.22	chr12	+	4501	15	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	44.8437195566277	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTCATAAATCAGAGATAT	NA	False	NA	NA	False	AATAAA	-20	NA	51395070	51420052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416779_51417477_51418534_51419212
ES.7521.23	chr12	+	5951	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	227	625	0	-625	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATTCTTATAATC	NA	False	NA	NA	False	AATAAA	-17	NA	51395070	51423144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.24	chr12	+	3618	16	FSM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	1	-693	1	-117	multi-exon	FALSE	canonical	3	11	junction_11	51.696120636745	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAAGGCACGACATCAC	NA	False	NA	NA	False	AATAAA	-21	NA	51395071	51420743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.25	chr12	+	12409	13	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	58.3130917261867	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGATGTGAGATTTATTTC	NA	False	NA	16	True	AATAAA	-17	NA	51395071	51423768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51414740_51415828_51416775_51417477
ES.7521.26	chr12	+	3026	16	FSM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	6	-106	6	3	multi-exon	FALSE	canonical	3	11	junction_11	51.696120636745	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTAGAACCTATGTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	51395076	51420156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.27	chr12	+	3229	17	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	68.2302798891372	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCTAGAACCTATG	NA	False	NA	NA	False	ATTAAA	-40	NA	51395077	51420153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51411486_51411671_51412037_51412343_51414534_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.28	chr12	+	4203	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	245	2355	18	554	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTTTTTCAGCTTTTA	NA	False	NA	NA	False	TTTAAA	-28	NA	51395088	51421414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.29	chr12	+	4700	14	FSM	ENSMUSG00000035293.14	ENSMUST00000121521.2	2594	14	-61	-2045	23	1338	multi-exon	FALSE	canonical	0	0	junction_10	45.3807038731625	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAGAATCTGTGTAGAA	NA	False	NA	NA	False	AATATA	-17	NA	51395093	51422198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414534_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.3	chr12	+	210	1	Intergenic	novelGene_6182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGAGGC	76	False	NA	NA	False	NA	NA	NA	51378366	51378576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51378400_51378600
ES.7521.30	chr12	+	6618	16	FSM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	23	-3715	23	-4	multi-exon	FALSE	canonical	3	11	junction_11	51.696120636745	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCGATGTGAGATTTAT	NA	False	NA	13	True	AATAAA	-14	NA	51395093	51423765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.31	chr12	+	5233	14	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	24	-118	intron_retention	FALSE	canonical	3	119	junction_8	18.0164290572891	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTCAAGGCACGACATCA	NA	False	NA	NA	False	AATAAA	-20	NA	51395094	51420742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.32	chr12	+	2762	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	43.730389190762	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCTAGAACCTATG	NA	False	NA	NA	False	ATTAAA	-40	NA	51395101	51420153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412204_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.33	chr12	+	3325	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	261	3217	34	-308	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTGTTATGACAGGG	NA	False	NA	NA	False	TATAAA	-18	NA	51395104	51420552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.34	chr12	+	4743	13	NIC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	34	3	intron_retention	FALSE	canonical	3	119	junction_8	18.7438878926794	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTAGAACCTATGTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	51395104	51420156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.35	chr12	+	6253	14	FSM	ENSMUSG00000035293.14	ENSMUST00000121521.2	2594	14	-46	-3613	38	-3	multi-exon	FALSE	canonical	0	0	junction_10	45.3807038731625	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGATGTGAGATTTATT	NA	False	NA	14	True	AATAAA	-15	NA	51395108	51423766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414534_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.38	chr12	+	6477	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-16	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.4853220461651	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGTCGATGTGAGATT	NA	False	NA	10	True	AATAAA	-11	NA	51395138	51423762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400671_51402673_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.39	chr12	+	3447	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-13	-117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	43.6835209203654	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAAGGCACGACATCAC	NA	False	NA	NA	False	AATAAA	-21	NA	51395141	51420743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418502_51419212
ES.7521.4	chr12	+	7523	15	NNC	ENSMUSG00000035293.14	novel	6803	15	NA	NA	-2089	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.5111682089142	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTGAGATTTATTTCAT	NA	False	NA	18	True	AATAAA	-19	NA	51392754	51423770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51393506_51394570_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.40	chr12	+	5880	9	ISM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	11679	9	2591	-9	3prime_fragment	FALSE	canonical	3	106	junction_4	20.4904703459925	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGGTCGATGTGAGA	NA	False	NA	8	True	AATAAA	-9	NA	51406522	51423760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.5	chr12	+	3274	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	-84	3613	-84	3	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCTAGAACCTATGTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	51394759	51420156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.6	chr12	+	3378	16	NNC	ENSMUSG00000035293.14	novel	2926	16	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	55.2451506167434	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTCTAGAACCTATG	NA	False	NA	NA	False	ATTAAA	-40	NA	51394836	51420153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51411486_51411671_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.7	chr12	+	6802	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	3	-2	3	2	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGAGATTTATTTCATA	NA	False	NA	19	True	AATAAA	-20	NA	51394846	51423771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.8	chr12	+	7190	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	31	-418	31	418	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCGATTAGTTAGAAACG	NA	False	NA	NA	False	NA	NA	NA	51394874	51424187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7521.9	chr12	+	3052	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	33	3718	33	1	multi-exon	FALSE	canonical	3	106	junction_10	21.5917595770389	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTCATAAATCAGAGATA	NA	False	NA	NA	False	AATAAA	-19	NA	51394876	51420051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ES.7522.1	chr12	+	2157	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	-56	-5	14	5	multi-exon	TRUE	canonical	3	358	junction_5	42.0133700610757	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTTGTTTGAAAAATG	NA	False	NA	20	True	AATAAA	-20	NA	51424306	51496889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.10	chr12	+	2078	25	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.138510291031	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAGCTTATTCTTGT	NA	False	NA	10	True	AATAAA	-10	NA	51424360	51496879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437103_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.11	chr12	+	2258	25	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_21	99.1125902978807	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAGCTTATTCTTGT	NA	False	NA	10	True	AATAAA	-10	NA	51424361	51496879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491600_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.12	chr12	+	1893	14	NNC	ENSMUSG00000020952.11	novel	2749	14	NA	NA	-1	-831	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	163.254004001388	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTTGTGTAACTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	51424361	51463167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460903_51460969_51461632_51461707_51462405
ES.7522.14	chr12	+	2231	26	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	130.367787432326	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	False	NA	8	True	AATAAA	-8	NA	51424363	51496877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51431364_51431508_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.15	chr12	+	7682	23	NIC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	1	1	intron_retention	FALSE	canonical	3	358	junction_5	43.7190740754711	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAACAGCTTATTCTTG	NA	False	NA	9	True	AATAAA	-9	NA	51424364	51496878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.16	chr12	+	3021	14	NNC	ENSMUSG00000020952.11	novel	2749	14	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	160.036349421295	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTTTAAGATTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	51424365	51464001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424692_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
ES.7522.17	chr12	+	1255	3	NIC	ENSMUSG00000020952.11	novel	1017	11	NA	NA	21811	2	intron_retention	FALSE	canonical	3	510	junction_2	10.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAGCTTATTCTTGT	NA	False	NA	10	True	AATAAA	-10	NA	51491523	51496879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51492520_51494354_51494424_51496689
ES.7522.2	chr12	+	2777	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-22	-6	-22	6	multi-exon	FALSE	canonical	3	21	junction_13	120.151925523899	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTAAGATTTATTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	51424340	51464004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
ES.7522.3	chr12	+	2012	24	NIC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	102.634208324206	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAGCTTATTCTTGT	NA	False	NA	10	True	AATAAA	-10	NA	51424350	51496879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51424420_51430887_51430959_51433832_51433922_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.4	chr12	+	1511	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	-12	1250	-12	-1250	multi-exon	FALSE	canonical	3	21	junction_13	120.151925523899	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGATTATTATTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	51424350	51462748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
ES.7522.6	chr12	+	4311	13	NIC	ENSMUSG00000020952.11	novel	2749	14	NA	NA	-6	6	intron_retention	FALSE	canonical	3	21	junction_12	124.472525973494	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTAAGATTTATTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	51424356	51464004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
ES.7522.7	chr12	+	4772	26	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	154.344114238282	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAGCTTATTCTTGT	NA	False	NA	10	True	AATAAA	-10	NA	51424358	51496879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51471590_51471651_51472008_51472468_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491600_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.8	chr12	+	5634	24	NIC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	358	junction_5	39.0380067823009	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAACAGCTTATTCT	NA	False	NA	7	True	AATAAA	-7	NA	51424359	51496876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7522.9	chr12	+	2085	25	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	101.306020167719	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	False	NA	8	True	AATAAA	-8	NA	51424359	51496877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462373_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ES.7523.1	chr12	+	2063	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-43	436	-27	-436	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACTGTTCCCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	51640096	51652108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ES.7523.2	chr12	+	5708	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-30	-3222	-14	3212	multi-exon	FALSE	canonical	0	0	junction_1	2.34608870919344	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTTCATTTGTTTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	51640109	51655766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ES.7523.3	chr12	+	2485	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	-24	-5	-8	5	multi-exon	FALSE	canonical	0	0	junction_1	2.34608870919344	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTAACACTAGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	51640115	51652549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ES.7523.4	chr12	+	2062	12	NNC	ENSMUSG00000020953.18	novel	2456	12	NA	NA	0	-436	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.34608870919344	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACTGTTCCCTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	51640123	51652108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51640215_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ES.7524.1	chr12	+	5502	1	Antisense	novelGene_ENSMUSG00000020954.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCTGCTTTATAAGAG	NA	False	NA	NA	False	NA	NA	NA	51677978	51683480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51678000_51683500
ES.7524.2	chr12	+	2418	1	Intergenic	novelGene_6183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATTAATGAAATATGCA	NA	False	NA	NA	False	AAAAAG	-14	NA	51681523	51683941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51681500_51683900
ES.7525.1	chr12	+	159	2	Antisense	novelGene_ENSMUSG00000089346.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTAAAAT	6487	False	NA	NA	False	NA	NA	NA	51699132	51824086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51699259_51824053
ES.7525.2	chr12	+	211	2	Intergenic	novelGene_6184	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAACAAAACCT	6488	False	NA	NA	False	NA	NA	NA	51699133	51784549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51699295_51784499
ES.7525.3	chr12	+	179	1	Intergenic	novelGene_6185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	6489	False	NA	NA	False	NA	NA	NA	51699134	51699313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51699100_51699300
ES.7525.4	chr12	+	4891	2	Antisense	novelGene_ENSMUSG00000020954.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACCAACT	NA	False	NA	NA	False	NA	NA	NA	51727318	51732271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51730011_51730072
ES.7525.5	chr12	+	2767	2	Antisense	novelGene_ENSMUSG00000020954.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGTCCTTATACATGA	NA	False	NA	NA	False	NA	NA	NA	51727318	51730147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51730011_51730072
ES.7525.6	chr12	+	183	1	Intergenic	novelGene_6186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCCACCTGATCCTT	NA	False	NA	NA	False	NA	NA	NA	51728185	51728368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51728200_51728400
ES.7525.7	chr12	+	2732	1	Intergenic	novelGene_6187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	51733183	51735915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51733200_51735900
ES.7525.8	chr12	+	1082	5	NNC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.6749019178793	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTGACGTTTGAGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	51737769	51785714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785325
ES.7525.9	chr12	+	2093	1	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	45799	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATGTGACGTTTGAG	NA	False	NA	NA	False	AATAAA	-13	NA	51783618	51785711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_51783600_51785700
ES.7526.1	chr12	+	5014	1	Antisense	novelGene_ENSMUSG00000035247.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAATAAATAAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	51827116	51832130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51827100_51832100
ES.7527.1	chr12	+	176	1	Intergenic	novelGene_6191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	51859635	51859811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_51859600_51859800
ES.7528.1	chr12	+	6865	2	Antisense	novelGene_ENSMUSG00000035247.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCAGCATCTTCTCTT	NA	False	NA	NA	False	ATTAAA	-27	NA	51876188	51883485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_51877339_51877770
ES.7529.1	chr12	-	5749	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-123	2711	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCAGTGTGGTTCTCAT	NA	False	NA	NA	False	TATAAA	-15	NA	51738803	51653703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.12	chr12	-	3717	15	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-36	1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	111.239514525355	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738716	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674488_51674664_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.14	chr12	-	7312	9	ISM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	57705	-1012	9616	1012	intron_retention	FALSE	canonical	3	278	junction_5	39.2107686101663	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51680965	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156
ES.7529.17	chr12	-	3751	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-18	1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	108.458696695511	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738698	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694469_51694525_51696882_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.18	chr12	-	3911	15	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-158	1012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	126.298803458711	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738838	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674483_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
ES.7529.19	chr12	-	3801	15	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-123	1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.8080218243753	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738803	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676295_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.2	chr12	-	4058	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-164	-1103	-164	1090	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTAGTGGAGTCCTT	NA	False	NA	76	True	AATAAA	-39	NA	51738844	51655324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.21	chr12	-	3764	15	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-37	1011	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.63088474816	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738717	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674488_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.22	chr12	-	3106	10	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-4	1011	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	107.035242840275	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738674	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51738204
ES.7529.23	chr12	-	3887	16	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	2	1011	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	114.947640254161	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738678	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
ES.7529.24	chr12	-	3554	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	306	1011	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	104.904048420449	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738364	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694469_51694525_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.28	chr12	-	4433	19	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-124	1011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	114.984325287095	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738804	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51663244_51663487_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.29	chr12	-	3948	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	2	1011	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	107.002902267882	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738678	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668103_51668239_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.3	chr12	-	4193	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-190	1088	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCTTAGTGGAGTCC	NA	False	NA	74	True	AATAAA	-37	NA	51738870	51655326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.30	chr12	-	3913	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	1	1011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	96.9502933208559	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738679	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694788_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.31	chr12	-	3931	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	2	1011	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	102.117885309088	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738678	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.35	chr12	-	3965	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-9	1011	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	95.3658866877984	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738689	51655403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.38	chr12	-	3895	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-118	1010	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	86.4729630192775	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGCTCTTGGCCACA	NA	False	NA	-4	True	AATAAA	-18	NA	51738798	51655404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657221_51666624_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.39	chr12	-	3694	15	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	2	1009	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	111.5621223483	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTGCTCTTGGCCAC	NA	False	NA	-5	True	AATAAA	-17	NA	51738678	51655405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674488_51674682_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.4	chr12	-	4288	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-170	-1072	-160	1072	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAGGAAATGAAGGTGC	NA	False	NA	58	True	AATAAA	-21	NA	51738840	51655342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.40	chr12	-	3707	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	2	1009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	89.2966591387009	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTGCTCTTGGCCAC	NA	False	NA	-5	True	AATAAA	-17	NA	51738678	51655405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676260_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.41	chr12	-	4214	19	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-14	1009	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	117.978563129175	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTGCTCTTGGCCAC	NA	False	NA	-5	True	AATAAA	-17	NA	51738694	51655405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668103_51668239_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.42	chr12	-	5400	1	Genic_Genomic	ENSMUSG00000020954.17	novel	NA	NA	NA	NA	29776	1009	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTGCTCTTGGCCAC	NA	False	NA	-5	True	AATAAA	-17	NA	51660805	51655405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_51655400_51660800
ES.7529.43	chr12	-	8972	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-128	1009	intron_retention	FALSE	canonical	3	65	junction_9	85.7138225433914	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTTGCTCTTGGCCAC	NA	False	NA	-5	True	AATAAA	-17	NA	51738808	51655405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.44	chr12	-	3798	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-3	1003	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	83.5622455950586	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTGTATGTTGCTCTT	NA	False	NA	-11	True	AATAAA	-11	NA	51738683	51655411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694788_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.46	chr12	-	4046	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-162	1000	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	107.147514407708	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTACCTGTATGTTGCT	NA	False	NA	-14	True	AATAAA	-8	NA	51738842	51655414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51734326_51734407_51738204
ES.7529.47	chr12	-	3845	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-190	-864	-190	851	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGATCAGTTTGCGA	NA	False	NA	0	True	AATAAA	-26	NA	51738870	51655563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.48	chr12	-	4064	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-169	-849	-159	849	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738839	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.49	chr12	-	8151	16	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	2	849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	100.048565984504	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738678	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51694525_51696882_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.5	chr12	-	4052	18	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	5	1013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	104.023752943597	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738675	51655401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694788_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.51	chr12	-	3728	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	5	849	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_16	107.147514407708	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738675	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51734326_51734407_51738204
ES.7529.52	chr12	-	3928	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-160	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.640071974838	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738840	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674483_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.53	chr12	-	3557	15	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-12	849	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	88.868769335832	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738692	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.55	chr12	-	3799	18	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	2	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	108.281352092928	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738678	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676260_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.56	chr12	-	3657	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-29	849	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	89.3853082633457	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738709	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708472_51738204
ES.7529.57	chr12	-	3277	18	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	4	849	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.933625420761	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTCTGATCAGTTTGC	NA	False	NA	-2	True	AATAAA	-24	NA	51738676	51655565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51655828_51655872_51656461_51656787_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.58	chr12	-	3756	16	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-71	848	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	113.749705738325	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTCTGATCAGTTTG	NA	False	NA	-3	True	AATAAA	-23	NA	51738751	51655566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.62	chr12	-	3525	14	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-54	845	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	94.4795147014677	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTTTCTGATCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	51738734	51655569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
ES.7529.63	chr12	-	3509	15	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	2	845	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	86.8080218243753	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTTTCTGATCAGT	NA	False	NA	-6	True	AATAAA	-20	NA	51738678	51655569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676295_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.67	chr12	-	3143	15	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-17880	843	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.229858415444	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGCCTTTTCTGATCA	NA	False	NA	-8	True	AATAAA	-18	NA	51708461	51655571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674483_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392
ES.7529.68	chr12	-	3519	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-6	-722	-6	709	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGAAGTCTGCTGGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	51738686	51655705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.69	chr12	-	3440	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-190	-459	-190	446	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCCTATTATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	51738870	51655968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.7	chr12	-	3737	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	2	1013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	125.491283451171	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738678	51655401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51724150_51724207_51738204
ES.7529.71	chr12	-	2893	17	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-16	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	104.904048420449	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATTTAACTTAA	NA	False	NA	NA	False	TTTAAA	-45	NA	51738696	51656396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694469_51694525_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.72	chr12	-	2957	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-135	-31	-135	18	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATTTAACTTAA	NA	False	NA	NA	False	TTTAAA	-45	NA	51738815	51656396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.73	chr12	-	3053	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-120	18	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATTTAACTTAA	NA	False	NA	NA	False	TTTAAA	-45	NA	51738800	51656396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.76	chr12	-	3116	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	-52	-18	-42	18	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATTTAACTTAA	NA	False	NA	NA	False	TTTAAA	-45	NA	51738722	51656396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.77	chr12	-	2985	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-26	14	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	95.3658866877984	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAATTTAAC	NA	False	NA	NA	False	TTTAAA	-41	NA	51738706	51656400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.78	chr12	-	2673	15	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	86.6540447376102	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	51738696	51656427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.79	chr12	-	3035	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-101	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	107.27387190621	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	51738781	51656428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.8	chr12	-	3673	14	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-34	1013	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	94.4795147014677	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738714	51655401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
ES.7529.80	chr12	-	2719	15	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	109.467449266801	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	51738676	51656428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
ES.7529.81	chr12	-	2833	16	NNC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	-57	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	83.5622455950586	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TTTAAA	-11	NA	51738737	51656430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694788_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.82	chr12	-	170	1	FSM	ENSMUSG00000020954.17	ENSMUST00000218212.2	3701	1	3532	-1	3532	1	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5034	False	NA	NA	False	NA	NA	NA	51687049	51686879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51686900_51687000
ES.7529.83	chr12	-	3118	7	ISM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	-4	36414	-4	-5961	5prime_fragment	FALSE	canonical	3	246	junction_1	14.5114897006935	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTGAAATTCATTTAC	NA	False	NA	NA	False	TATAAA	-21	NA	51738684	51692841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ES.7529.84	chr12	-	3987	1	Genic_Genomic	ENSMUSG00000020954.17	novel	NA	NA	NA	NA	-427	-48240	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCAAAGTTTTGTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	51739107	51735120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_51735100_51739100
ES.7529.9	chr12	-	3686	18	NNC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	-16	1012	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	100.223936114295	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTCTTGGCCACATT	NA	False	NA	-2	True	AATAAA	-20	NA	51738696	51655402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204_51738367_51738623
ES.753.1	chr1	+	1551	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	7	-70	-4	5	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTACAAGATCTACATCT	1138	False	NA	18	True	AATAAA	-19	NA	74627454	74631353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ES.753.3	chr1	+	1773	8	NNC	ENSMUSG00000026172.13	novel	1890	8	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	48.8128454154336	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	1160	False	NA	NA	False	NA	NA	NA	74627476	74631602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630123_74630289_74630747_74630866_74630980
ES.753.4	chr1	+	3114	3	NIC	ENSMUSG00000026172.13	novel	1679	8	NA	NA	24	-3	intron_retention	FALSE	canonical	3	142	junction_1	8	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCAGGCTTGTGCCTTTC	1166	False	NA	1	True	CATAAA	-13	NA	74627482	74631280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74629894_74630118_74630289_74630747
ES.753.5	chr1	+	1506	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	63	321	-11	-2	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGCTTGTGCCTTTCC	1205	False	NA	2	True	CATAAA	-14	NA	74627521	74631281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ES.753.6	chr1	+	3748	1	NIC	ENSMUSG00000026172.13	novel	1488	8	NA	NA	1	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGCTTGTGCCTTTCC	1217	False	NA	2	True	CATAAA	-14	NA	74627533	74631281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74627500_74631300
ES.753.7	chr1	+	2555	7	NIC	ENSMUSG00000026172.13	novel	1679	8	NA	NA	17	12	intron_retention	FALSE	canonical	3	106	junction_1	16.0381489649592	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCTACATCTACAAATG	1233	False	NA	25	True	AATAAA	-26	NA	74627549	74631360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ES.7530.1	chr12	-	174	1	Intergenic	novelGene_6188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAGACCA	NA	False	NA	NA	False	NA	NA	NA	51745193	51745019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51745000_51745200
ES.7531.1	chr12	-	227	1	Intergenic	novelGene_6189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTACTGAATGACACATA	1015	False	NA	NA	False	NA	NA	NA	51761088	51760861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51760900_51761100
ES.7532.1	chr12	-	9434	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	-441	-5	-441	5	multi-exon	FALSE	canonical	3	48	junction_19	32.7528018915334	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCGTGTTACTGGTT	NA	False	NA	0	True	ATTAAA	-19	NA	51876760	51790499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.10	chr12	-	8703	42	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	37.7982842400705	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876320	51790504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.14	chr12	-	7220	35	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-16114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	38.8513269469182	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	6297	False	NA	-5	True	ATTAAA	-14	NA	51845478	51790504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837392_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436
ES.7532.15	chr12	-	9103	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	35.7647659117968	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	NA	False	NA	-6	True	ATTAAA	-13	NA	51876365	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803955_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.16	chr12	-	8018	38	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-89	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	40.8448220546726	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	NA	False	NA	-6	True	ATTAAA	-13	NA	51876408	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51836954_51837038_51838178_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.17	chr12	-	8802	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-523	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	36.1721758241729	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	NA	False	NA	-6	True	ATTAAA	-13	NA	51876842	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51876693
ES.7532.19	chr12	-	7419	38	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-19631	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	38.0135111115381	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	9343	False	NA	-6	True	ATTAAA	-13	NA	51848995	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801141_51801743_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946
ES.7532.2	chr12	-	8921	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-75	5	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	34.7562617728993	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCGTGTTACTGGTT	NA	False	NA	0	True	ATTAAA	-19	NA	51876394	51790499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.22	chr12	-	9416	44	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-654	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	35.6953487614525	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	NA	False	NA	-6	True	ATTAAA	-13	NA	51876973	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985_51876610_51876693
ES.7532.24	chr12	-	9641	44	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-500	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	41.2464528851687	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAACCTGTGTCGTGTTA	NA	False	NA	-6	True	ATTAAA	-13	NA	51876819	51790505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841659_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51874989_51875146_51875985
ES.7532.25	chr12	-	5928	22	NNC	ENSMUSG00000035247.17	novel	9012	43	NA	NA	7794	-2	intron_retention	FALSE	canonical	3	21	junction_15	39.5826870695543	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGAACCTGTGTCGTGTT	8631	False	NA	-7	True	ATTAAA	-12	NA	51821570	51790506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433
ES.7532.27	chr12	-	5960	32	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	213	11238	-5	3078	5prime_fragment	FALSE	canonical	3	48	junction_8	19.1238365353123	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGAAATTGTTCTCA	NA	False	NA	NA	False	AATAAA	-10	NA	51876106	51801742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.28	chr12	-	199	1	Intergenic	novelGene_6190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCAGTCAAGTGTTT	NA	False	NA	NA	False	AAAAAG	-6	NA	51808862	51808663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51808700_51808900
ES.7532.29	chr12	-	3565	21	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-46	5283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	21.3096222397301	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTATATTCCGGCAC	NA	False	NA	NA	False	NA	NA	NA	51876365	51821506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847579_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.3	chr12	-	9514	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-664	3	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_19	32.5636390713501	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTCGTGTTACTGG	NA	False	NA	-2	True	ATTAAA	-17	NA	51876983	51790501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.30	chr12	-	3783	19	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-9	-1815	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	20.2552386151836	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	51876110	51828604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51829368_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.31	chr12	-	3524	10	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	193	52376	-25	-16091	5prime_fragment	FALSE	canonical	3	70	junction_5	8.71496513383448	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTTTTTTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	51876126	51842880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.32	chr12	-	2616	10	ISM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	-93	53570	-93	-17285	5prime_fragment	FALSE	canonical	3	70	junction_5	8.71496513383448	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTAGAGTATGATATAGA	NA	False	NA	NA	False	NA	NA	NA	51876412	51844074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.33	chr12	-	3375	1	NIC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	5	26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAAGTAAGGGTGTCTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	51876314	51872939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51872900_51876300
ES.7532.34	chr12	-	1907	2	FSM	ENSMUSG00000035247.17	ENSMUST00000217804.2	1447	2	-462	2	-244	-2	multi-exon	FALSE	canonical	3	82	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	51876563	51872967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51874297_51875985
ES.7532.5	chr12	-	9359	42	NIC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-553	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	36.3229450281028	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	-4	True	ATTAAA	-15	NA	51876872	51790503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.6	chr12	-	8162	42	NIC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-10	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_18	35.533597142387	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACCTGTGTCGTGTTACT	NA	False	NA	-4	True	ATTAAA	-15	NA	51876329	51790503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ES.7532.7	chr12	-	9560	44	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-662	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	37.7170445049334	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876981	51790504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985_51876610_51876693
ES.7533.1	chr12	-	123	1	Intergenic	novelGene_6192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGCACAGTGTAATT	NA	False	NA	NA	False	GATAAA	-18	NA	51905591	51905468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51905500_51905600
ES.7534.1	chr12	+	3794	1	Antisense	novelGene_ENSMUSG00000035181.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATCACTAAAACCAAGT	NA	False	NA	NA	False	AAAACA	-11	NA	52004887	52008681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_52004900_52008700
ES.7535.1	chr12	-	7813	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	-50	0	-50	0	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	9949	False	NA	0	True	AATAAA	-16	NA	52018154	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.10	chr12	-	9991	34	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	6	0	intron_retention	TRUE	canonical	1	4	junction_22	13.6753651012313	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	52018074	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52008428_52017985
ES.7535.11	chr12	-	7817	37	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	17.5461472680078	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	52018073	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999431_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52006275_52006358_52008215_52008428_52017985
ES.7535.12	chr12	-	3067	8	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	26.4397659688923	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	NA	False	NA	-2	True	AATAAA	-14	NA	52018084	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_52008215_52008428_52017985
ES.7535.13	chr12	-	7675	36	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	11	-2	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_3	13.4481923525439	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	NA	False	NA	-2	True	AATAAA	-14	NA	52018093	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51927974_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.14	chr12	-	6668	30	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-5241	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	12.7127787816811	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	7173	False	NA	-2	True	AATAAA	-14	NA	51999328	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938021_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269
ES.7535.16	chr12	-	7701	35	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-50	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_22	13.5005126136177	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	9949	False	NA	-2	True	AATAAA	-14	NA	52018154	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.18	chr12	-	4478	17	NNC	ENSMUSG00000035181.7	novel	4981	25	NA	NA	3674	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.8994854364503	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	9472	False	NA	-2	True	AATAAA	-14	NA	51961835	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940633_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51959121_51959207_51961756
ES.7535.19	chr12	-	7700	37	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	64	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	16.3547667382243	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	NA	False	NA	-2	True	AATAAA	-14	NA	52018016	51922655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51958987_51959015_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.2	chr12	-	5991	13	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	13321	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	23.5490032815734	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	51952188	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51932308_51932500_51933244_51935841_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103
ES.7535.21	chr12	-	10174	35	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-43	-3	intron_retention	FALSE	canonical	1	6	junction_30	13.4321632800016	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTTGTATTTTGAA	9956	False	NA	-3	True	AATAAA	-13	NA	52018147	51922656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999431_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52008428_52017985
ES.7535.22	chr12	-	7557	30	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-8968	-3	intron_retention	FALSE	canonical	0	0	junction_27	15.9379743057351	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTTGTATTTTGAA	3446	False	NA	-3	True	AATAAA	-13	NA	52003055	51922656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997940_51999269_51999428_52002162_52002338_52002903
ES.7535.23	chr12	-	4489	16	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	18	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	19.5748137496461	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTTGTATTTTGAA	NA	False	NA	-3	True	AATAAA	-13	NA	52018062	51922656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_52008215_52008428_52017985
ES.7535.25	chr12	-	7227	35	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	7	-293	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	14.1477925699409	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATATTTTTTGGCTGTTT	NA	False	NA	NA	False	TATAAA	-28	NA	52018073	51922946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52008215_52008428_52017985
ES.7535.26	chr12	-	6881	36	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_34	15.781311603234	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACTTTCTACATGG	9941	False	NA	NA	False	TATAAA	-18	NA	52018162	51923752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999431_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52006004_52008215_52008428_52017985
ES.7535.27	chr12	-	6657	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	7	1099	7	0	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACTTTCTACATGG	NA	False	NA	NA	False	TATAAA	-18	NA	52018097	51923752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.28	chr12	-	159	1	Intergenic	novelGene_6193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8305	False	NA	NA	False	NA	NA	NA	51931629	51931470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51931500_51931600
ES.7535.29	chr12	-	5006	11	NNC	ENSMUSG00000035181.7	novel	780	6	NA	NA	8569	2046	intron_retention	TRUE	non_canonical	0	0	junction_1	18.8862383761299	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAAAACTTG	NA	False	NA	NA	False	NA	NA	NA	51956940	51932232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51932338_51932530_51935054_51935636_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740
ES.7535.3	chr12	-	8296	26	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-2427	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_25	13.7861379653622	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	4932	False	NA	0	True	AATAAA	-16	NA	51989160	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51988059_51988269
ES.7535.30	chr12	-	4130	25	ISM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	79	21826	55	7690	5prime_fragment	FALSE	canonical	1	15	junction_24	10.5256795768993	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGACTCTGTGTCA	NA	False	NA	NA	False	AATAAA	-12	NA	52018025	51944479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.31	chr12	-	3758	20	NNC	ENSMUSG00000035181.7	novel	4111	13	NA	NA	4	2430	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.499977660604	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTAGCTTTCTTCATT	NA	False	NA	NA	False	NA	NA	NA	52018076	51963597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51964320_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.32	chr12	-	5198	13	FSM	ENSMUSG00000035181.7	ENSMUST00000218254.2	4111	13	24	-1111	24	1111	multi-exon	FALSE	canonical	1	15	junction_12	12.4328753266848	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGGTACTGTACTTTT	NA	False	NA	NA	False	TATAAA	-25	NA	52018056	51981770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.33	chr12	-	2430	13	FSM	ENSMUSG00000035181.7	ENSMUST00000218254.2	4111	13	-11	1692	-11	-1692	multi-exon	FALSE	canonical	1	15	junction_12	12.4328753266848	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTGTTAGTGTTGTT	NA	False	NA	NA	False	ATTAAA	-36	NA	52018091	51984573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.34	chr12	-	206	1	Intergenic	novelGene_6194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCCTGGAGATGTGT	7979	False	NA	NA	False	NA	NA	NA	51986113	51985907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_51985900_51986100
ES.7535.35	chr12	-	2091	12	NNC	ENSMUSG00000035181.7	novel	4111	13	NA	NA	-47	-3115	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	21.4787998495076	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGGTTGCTGTTAGTGT	9952	False	NA	NA	False	AATGAA	-19	NA	52018151	51992150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52006275_52006358_52008215_52008428_52017986
ES.7535.36	chr12	-	4653	9	NIC	ENSMUSG00000035181.7	novel	4111	13	NA	NA	-3	-4994	intron_retention	FALSE	canonical	1	15	junction_8	12.4874937437422	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGAAGGACAATTGAACTT	NA	False	NA	NA	False	NA	NA	NA	52018083	51994029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52008428_52017985
ES.7535.4	chr12	-	7523	35	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_33	14.1477925699409	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	52018076	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52008215_52008428_52017985
ES.7535.5	chr12	-	7785	36	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_35	11.2182067758312	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	52017907	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017766
ES.7535.6	chr12	-	7804	36	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	14.1255594073802	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	9950	False	NA	0	True	AATAAA	-16	NA	52018153	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003869_52003971_52005635_52005848_52008215_52008428_52017985
ES.7535.8	chr12	-	5453	22	NIC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	16.7982560373299	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	NA	False	NA	0	True	AATAAA	-16	NA	52018076	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_52008215_52008428_52017985
ES.7535.9	chr12	-	5953	26	NNC	ENSMUSG00000035181.7	novel	7763	36	NA	NA	1770	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	13.5029478263081	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	1775	False	NA	0	True	AATAAA	-16	NA	51992317	51922653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976987_51977084_51984853_51984954_51986353_51986507_51992203
ES.7536.1	chr12	+	220	1	Intergenic	novelGene_6195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	AAAACA	-15	NA	52020386	52020606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52020400_52020600
ES.7537.1	chr12	-	2313	1	Intergenic	novelGene_6196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGTTTTGCTTGTTTGT	1246	False	NA	NA	False	ATTAAA	-20	NA	52026857	52024544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_52024500_52026900
ES.7538.1	chr12	-	4414	1	Antisense	novelGene_ENSMUSG00000112064.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCCTCAGTGCCTAA	NA	False	NA	NA	False	AATATA	-37	NA	52043841	52039427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_52039400_52043800
ES.7538.2	chr12	-	4438	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	5	-1879	5	1879	multi-exon	FALSE	canonical	3	170	junction_1	5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCTCGAGTCTATTGTA	NA	False	NA	NA	False	NA	NA	NA	52053279	52042410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_52046657_52051661_52051732_52053157
ES.7538.3	chr12	-	1252	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	-6	1318	-6	-1318	multi-exon	FALSE	canonical	3	170	junction_1	5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGACTTTGTGCTCGGG	NA	False	NA	78	True	AAAAAG	-23	NA	52053290	52045607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_52046657_52051661_52051732_52053157
ES.7538.4	chr12	-	1367	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	9	-1398	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCCAGTTTTTCTTA	NA	False	NA	-2	True	AATAAA	-15	NA	52053275	52045687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_52046657_52051661_52051732_52052947
ES.7538.5	chr12	-	1241	4	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	-1	-1398	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	77.1895214535122	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCCAGTTTTTCTTA	NA	False	NA	-2	True	AATAAA	-15	NA	52053285	52045687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_52046657_52051079_52051154_52051661_52051732_52053157
ES.7538.6	chr12	-	1366	5	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	4	-1398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	74.9449798185309	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCCAGTTTTTCTTA	NA	False	NA	-2	True	AATAAA	-15	NA	52053280	52045687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_52046657_52051079_52051154_52051252_52051383_52051661_52051732_52053157
ES.7538.7	chr12	-	839	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	5	1720	5	-1720	multi-exon	FALSE	canonical	3	170	junction_1	5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACTACATAAA	NA	False	NA	NA	False	NA	NA	NA	52053279	52046009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_52046657_52051661_52051732_52053157
ES.7538.8	chr12	-	1060	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	-6	-1720	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACTACATAAA	NA	False	NA	NA	False	NA	NA	NA	52053290	52046009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_52046657_52051661_52051732_52052947
ES.7539.1	chr12	-	158	1	Intergenic	novelGene_6197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	52068318	52068160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_52068200_52068300
ES.754.1	chr1	+	157	2	Antisense	novelGene_ENSMUSG00000026171.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	6040	False	NA	NA	False	NA	NA	NA	74632356	74635516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_74632380_74635382
ES.7540.1	chr12	+	1214	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	-2	1775	-2	-1775	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGATTCTGTATTTGGG	NA	False	NA	20	True	AATAAA	-29	NA	52144517	52357752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
ES.7540.10	chr12	+	8737	3	NNC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	121257	-1788	intron_retention	FALSE	canonical	0	0	junction_1	137.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCTGCTCTATGATGA	NA	False	NA	7	True	AATAAA	-16	NA	52344126	52357739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52347497_52347551_52352664_52357484
ES.7540.2	chr12	+	7710	6	ISM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	-2	124289	-2	43675	5prime_fragment	FALSE	canonical	3	215	junction_4	13.7491817938378	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	52144517	52235238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999
ES.7540.3	chr12	+	3776	12	NNC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	-5	1071	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	70.6605200299934	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTGTATATAAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	52144533	52360598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484_52357820_52358087
ES.7540.4	chr12	+	3680	11	NNC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	-5	1066	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	98.241793550403	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATCTGTATATAAG	NA	False	NA	NA	False	NA	NA	NA	52144533	52360593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52144675_52145135_52145284_52147249_52147285_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484_52357820_52358087
ES.7540.5	chr12	+	1062	10	NIC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	0	-1785	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	77.2930929787534	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTCTATGATGATTC	NA	False	NA	10	True	AATAAA	-19	NA	52144538	52357742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52352580_52352664_52357484
ES.7540.6	chr12	+	3653	11	NNC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	0	1074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	97.8562210592663	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATATAAGGTGAAATG	NA	False	NA	NA	False	NA	NA	NA	52144538	52360601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52352580_52352664_52357484_52357820_52358087
ES.7540.7	chr12	+	1257	12	NNC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	6	-1788	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	91.1117740574775	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCTGCTCTATGATGA	NA	False	NA	7	True	AATAAA	-16	NA	52144549	52357739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52275655_52275744_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
ES.7540.8	chr12	+	1324	12	NIC	ENSMUSG00000035142.19	novel	2987	11	NA	NA	23	-1793	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	93.8550843561718	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGCTGGCTGCTCTAT	NA	False	NA	2	True	AATAAA	-11	NA	52144566	52357734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52144675_52145135_52145284_52147249_52147285_52152001_52152179_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
ES.7540.9	chr12	+	1476	1	Intergenic	novelGene_6198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	52174329	52175805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52174300_52175800
ES.7541.1	chr12	+	179	1	Intergenic	novelGene_6199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATGTTTAAAAAAAAA	977	False	NA	NA	False	NA	NA	NA	52530421	52530600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52530400_52530600
ES.7542.1	chr12	+	7214	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-233	898	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATAACATAATTAAATC	NA	False	NA	88	True	AGTAAA	-9	NA	52550521	52616516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.10	chr12	+	6334	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-67	12	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTGATTTGCTCCAT	NA	False	NA	17	True	AGTAAA	-28	NA	52550687	52615630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.11	chr12	+	6704	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-65	384	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGTTGCTAAAGAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	52550689	52616002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.13	chr12	+	5841	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-20	-434	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTGGAGTATGTATATA	NA	False	NA	10	True	AATAAA	-22	NA	52550734	52615184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.14	chr12	+	6948	6	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	129.222908185817	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGACTTGTGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	52550779	52616442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52613793
ES.7542.15	chr12	+	6899	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	672	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTCTTCCAAAACTGAT	NA	False	NA	NA	False	ATTAAA	-35	NA	52550779	52616290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.17	chr12	+	6395	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	165	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGAGAACAAAGTCCCT	NA	False	NA	NA	False	TATAAA	-22	NA	52550779	52615783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.18	chr12	+	6747	6	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-19	665	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	120.03266222158	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTACACCTCTTCCAA	NA	False	NA	NA	False	ATTAAA	-28	NA	52550779	52616283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.19	chr12	+	8032	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-17	-21579	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACCAACAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	52550781	52570843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861
ES.7542.2	chr12	+	5174	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-233	-159	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAATGTTTAATGC	NA	False	NA	NA	False	ATTAAA	-15	NA	52550521	52614476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.20	chr12	+	6600	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-13	382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	115.820862638051	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGGTTGCTAAAGAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	52550785	52616000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604277_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.21	chr12	+	8357	2	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	-11	-21587	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAACCAACAA	NA	False	NA	NA	False	NA	NA	NA	52550787	52570835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861
ES.7542.22	chr12	+	5073	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-3	-158	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAAATGTTTAATGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	52550795	52614477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.23	chr12	+	7451	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-2	1241	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCAGGTGCAATTTAT	NA	False	NA	NA	False	AATACA	-13	NA	52550796	52616859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.24	chr12	+	7565	3	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-1	494	intron_retention	FALSE	canonical	3	40	junction_2	39.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	52550797	52592916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589274
ES.7542.25	chr12	+	7635	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-1	1423	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	52550797	52617041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.27	chr12	+	5759	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-1	-442	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.291550736445	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGACTCCTTGGAGTA	NA	False	NA	2	True	AATAAA	-14	NA	52550797	52615176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566740_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.28	chr12	+	6712	4	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-1	816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	72.6192505851965	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	6	True	ATTAAA	-15	NA	52550797	52616434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52613793
ES.7542.31	chr12	+	6510	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	1	-23083	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTATAGGATTTTCAT	NA	False	NA	NA	False	NA	NA	NA	52550799	52569339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861
ES.7542.32	chr12	+	7150	8	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	1	818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.800586842948	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550799	52616436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52556166_52556289_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.33	chr12	+	5571	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	1	344	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCATGACATTTTCATA	NA	False	NA	NA	False	AATACA	-21	NA	52550799	52614979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.34	chr12	+	9350	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCAAGTCTTTTTAATT	NA	False	NA	NA	False	AATACA	-12	NA	52550799	52618758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.35	chr12	+	3908	2	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	8	-25678	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTAAGTTTATATTT	NA	False	NA	NA	False	AGTAAA	-8	NA	52550806	52566744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861
ES.7542.36	chr12	+	6578	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	9	382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	125.738706141833	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGGTTGCTAAAGAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	52550807	52616000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613799
ES.7542.38	chr12	+	7304	8	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	19	819	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	124.691455936938	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52550817	52616437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52565978_52566023_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.39	chr12	+	2640	6	NIC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	126.647542415951	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAGGCTCCTAAGAGTT	NA	False	NA	4	True	AGTAAA	-15	NA	52550818	52615617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52551171_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.4	chr12	+	5870	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-232	-442	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	136.944838854514	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGACTCCTTGGAGTA	NA	False	NA	2	True	AATAAA	-14	NA	52550522	52615176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.40	chr12	+	6634	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	20	104	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAACCAGGCTACTGTTT	NA	False	NA	109	True	NA	NA	NA	52550818	52615722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.41	chr12	+	6909	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	25	384	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGTTGCTAAAGAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	52550823	52616002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.42	chr12	+	6085	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	28	-437	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTTGGAGTATGTAT	NA	False	NA	7	True	AATAAA	-19	NA	52550826	52615181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.43	chr12	+	7341	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	28	819	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTACACTGACTTGTG	NA	False	NA	9	True	ATTAAA	-18	NA	52550826	52616437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.44	chr12	+	6513	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAGGCTCCTAAGAGTT	NA	False	NA	4	True	AGTAAA	-15	NA	52550831	52615617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.46	chr12	+	3418	6	NIC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	61	818	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	126.647542415951	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTTACACTGACTTGT	NA	False	NA	8	True	ATTAAA	-17	NA	52550859	52616436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52551171_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.47	chr12	+	5581	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	63	77	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGAGAGAGTGAACCTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	52550861	52614712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.49	chr12	+	6272	4	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	68	-8433	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	112.075371464425	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAATGAAGTATCCTTAA	NA	False	NA	NA	False	NA	NA	NA	52550866	52606202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271
ES.7542.5	chr12	+	6593	6	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-231	385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	145.904078078716	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGTTGCTAAAGAATTTA	NA	False	NA	NA	False	ATTAAA	-25	NA	52550523	52616003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52613793
ES.7542.50	chr12	+	356	2	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	96	-29481	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTGTATTTTGAGA	NA	False	NA	NA	False	AATATA	-11	NA	52550894	52562941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861
ES.7542.51	chr12	+	7662	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	125	1237	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATTCCAGGTGCAAT	NA	False	NA	NA	False	AATACA	-9	NA	52550923	52616855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.52	chr12	+	6820	8	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-118	379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	139.800586842948	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTAGGTTGCTAAAG	NA	False	NA	NA	False	ATTAAA	-19	NA	52551006	52615997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52556908_52557008_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.53	chr12	+	5174	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-100	-167	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTCATATATGAAATG	NA	False	NA	NA	False	ATTAAA	-7	NA	52551024	52614468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.54	chr12	+	6555	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	-87	247	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCGGTAAATGTAGTATT	NA	False	NA	NA	False	AAGAAA	-26	NA	52551037	52615865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.55	chr12	+	4615	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-81	-707	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTATTCAACAGTGCC	NA	False	NA	NA	False	ACTAAA	-21	NA	52551043	52613928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.56	chr12	+	6954	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-69	661	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCACCTTACACCTCTT	NA	False	NA	NA	False	ATTAAA	-24	NA	52551055	52616279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.57	chr12	+	6255	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	163	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	119.725728229149	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAGGCTCCTAAGAGTT	NA	False	NA	4	True	AGTAAA	-15	NA	52551287	52615617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52551366_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.58	chr12	+	6183	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	0	-986	0	3	multi-exon	FALSE	canonical	3	174	junction_1	60.5276796185018	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTAAGAGTTTGAT	NA	False	NA	8	True	AGTAAA	-19	NA	52562859	52615621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.59	chr12	+	6996	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	0	-1799	0	816	multi-exon	FALSE	canonical	3	174	junction_1	60.5276796185018	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTTACACTGACTT	NA	False	NA	6	True	ATTAAA	-15	NA	52562859	52616434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.6	chr12	+	6310	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-218	12	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	136.944838854514	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTTGATTTGCTCCAT	NA	False	NA	17	True	AGTAAA	-28	NA	52550536	52615630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.61	chr12	+	6558	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	0	-1361	0	378	multi-exon	FALSE	canonical	3	174	junction_1	60.5276796185018	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTTCTAGGTTGCTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	52562859	52615996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.62	chr12	+	5161	5	NIC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	3802	382	intron_retention	FALSE	canonical	3	174	junction_1	65.8369197335355	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGGTTGCTAAAGAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	52566661	52616000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52566751_52589271_52589420_52604271_52606883_52609104_52609211_52613793
ES.7542.63	chr12	+	3429	1	Intergenic	novelGene_6200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	4077	False	NA	NA	False	NA	NA	NA	52579484	52582913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52579500_52582900
ES.7542.64	chr12	+	6253	1	NIC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	37090	-8433	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAATGAAGTATCCTTAA	NA	False	NA	NA	False	NA	NA	NA	52599949	52606202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_52599900_52606200
ES.7542.65	chr12	+	2713	1	Genic_Genomic	ENSMUSG00000035133.10	novel	NA	NA	NA	NA	54030	844	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATGAAGGTTCTTATT	9249	False	NA	NA	False	AATAAA	-11	NA	52616889	52619602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_52616900_52619600
ES.7542.66	chr12	+	2722	1	Genic_Genomic	ENSMUSG00000035133.10	novel	NA	NA	NA	NA	55321	2144	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATGTCAGATATAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	52618180	52620902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_52618200_52620900
ES.7542.7	chr12	+	3309	6	NNC	ENSMUSG00000035133.10	novel	1669	3	NA	NA	-199	916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.226986239247	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTTGCTTGTAAGTT	NA	False	NA	106	True	ATTAAA	-1	NA	52550555	52616534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.8	chr12	+	6666	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-199	384	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGTTGCTAAAGAATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	52550555	52616002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7542.9	chr12	+	7265	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	-97	913	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTTGTTGCTTGTAA	NA	False	NA	103	True	AGTAAA	-24	NA	52550657	52616531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ES.7543.1	chr12	-	3887	1	Antisense	novelGene_ENSMUSG00000035133.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTACCAAGTTACAGCC	6398	False	NA	NA	False	ATTAAA	-14	NA	52615293	52611406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_52611400_52615300
ES.7544.1	chr12	-	2770	1	Intergenic	novelGene_6201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52624963	52622193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_52622200_52625000
ES.7545.1	chr12	+	1590	1	Intergenic	novelGene_6202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGAGGTATATCAGA	NA	False	NA	NA	False	NA	NA	NA	52626381	52627971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52626400_52628000
ES.7546.1	chr12	+	176	1	Intergenic	novelGene_6203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGTTTTTCGAGACA	NA	False	NA	NA	False	NA	NA	NA	52633470	52633646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52633500_52633600
ES.7547.1	chr12	+	174	1	Intergenic	novelGene_6204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAGAATCAT	NA	False	NA	NA	False	NA	NA	NA	52642662	52642836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52642700_52642800
ES.7548.1	chr12	+	161	1	Intergenic	novelGene_6205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52919513	52919674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_52919500_52919700
ES.7549.1	chr12	-	159	1	Intergenic	novelGene_6206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	53038091	53037932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_53037900_53038100
ES.755.1	chr1	-	1462	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	-8	-3	-8	-2	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATGTGGTATGACTC	NA	False	NA	NA	False	AATAAA	-28	NA	74640544	74632908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ES.755.2	chr1	-	3917	8	ISM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	-8	-1	-8	1	intron_retention	FALSE	canonical	3	22	junction_3	28.8139705344332	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTATGTGGTATGAC	NA	False	NA	NA	False	AATAAA	-26	NA	74640544	74632910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851
ES.755.4	chr1	-	1389	10	NNC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_4	27.663766023759	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640533	74632911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634866_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ES.755.5	chr1	-	1360	9	NIC	ENSMUSG00000026171.13	novel	1451	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	35.2896496865582	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640535	74632911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74633562_74633718_74633854_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ES.755.6	chr1	-	1549	9	NIC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-2	0	intron_retention	FALSE	canonical	3	94	junction_3	8.95474734428616	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640533	74632911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637757_74637851_74637952_74638224_74638300_74640483
ES.755.8	chr1	-	2304	8	NIC	ENSMUSG00000026171.13	novel	1451	10	NA	NA	-7	0	intron_retention	FALSE	canonical	3	97	junction_2	8.65907569182385	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640543	74632911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74633562_74633718_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ES.755.9	chr1	-	1432	10	NNC	ENSMUSG00000026171.13	novel	1479	10	NA	NA	-1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	34.0177876491581	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAACAGCATCTAGCC	NA	False	NA	NA	False	AATAAA	-13	NA	74640532	74632923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635091_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ES.7550.1	chr12	+	3411	1	Antisense	novelGene_ENSMUSG00000035105.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAGACAATTCTAAAATG	NA	False	NA	NA	False	AAAACA	-14	NA	54226296	54229707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_54226300_54229700
ES.7550.2	chr12	+	8683	4	Antisense	novelGene_ENSMUSG00000035105.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGACATGTTCAGTG	NA	False	NA	NA	False	NA	NA	NA	54226863	54240220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_54227446_54228419_54228493_54230667_54230799_54232323
ES.7551.1	chr12	-	4655	3	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	16433	642	16433	-642	intron_retention	FALSE	canonical	3	66	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGAGTCGTCTTGATC	NA	False	NA	NA	False	NA	NA	NA	54234213	54226408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54227442_54228416_54228491_54230665
ES.7551.2	chr12	-	2031	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-11	642	-11	-642	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGAGTCGTCTTGATC	NA	False	NA	NA	False	NA	NA	NA	54250657	54226408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ES.7551.4	chr12	-	1692	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	6	964	6	-964	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGTTTTTCTGGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	54250640	54226730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ES.7551.5	chr12	-	1572	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	-5	1095	-5	-1095	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTTCTGAAGGTCATT	NA	False	NA	NA	False	NA	NA	NA	54250651	54226861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ES.7551.6	chr12	-	3371	1	Intergenic	novelGene_6207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATGAA	-45	NA	54244242	54240871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54240900_54244200
ES.7552.1	chr12	-	2750	1	Intergenic	novelGene_6208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54311515	54308765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54308800_54311500
ES.7553.1	chr12	-	176	1	Intergenic	novelGene_6209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGACAAACATGTGG	1335	False	NA	NA	False	NA	NA	NA	54458140	54457964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54458000_54458100
ES.7554.1	chr12	+	178	1	Intergenic	novelGene_6210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAACAA	NA	False	NA	NA	False	NA	NA	NA	54606158	54606336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54606200_54606300
ES.7555.1	chr12	-	196	1	Intergenic	novelGene_6211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATAATTGCACTCTTAG	3750	False	NA	NA	False	NA	NA	NA	54652756	54652560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54652600_54652800
ES.7556.1	chr12	+	182	1	Intergenic	novelGene_6212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	54688551	54688733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54688600_54688700
ES.7557.1	chr12	+	2173	1	Antisense	novelGene_ENSMUSG00000044408.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCTGGGGAGGGCAAAC	NA	False	NA	NA	False	NA	NA	NA	54703120	54705293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_54703100_54705300
ES.7558.1	chr12	-	3717	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	62	-2433	-15	2433	multi-exon	FALSE	canonical	3	293	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAAAGAGAACATTTAAC	NA	False	NA	NA	False	NA	NA	NA	54703296	54689743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54693321_54703156
ES.7558.2	chr12	-	1355	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	-13	4	-13	-4	multi-exon	FALSE	canonical	3	293	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCAGTCTCTTTTATGG	NA	False	NA	NA	False	ATTAAA	-13	NA	54703371	54692180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54693321_54703156
ES.7558.3	chr12	-	3429	1	FSM	ENSMUSG00000106344.3	ENSMUST00000197752.3	80	1	-2821	-528	-2821	528	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAATGTAGCAGTCT	6111	False	NA	NA	False	ATTAAA	-4	NA	54695618	54692189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54692200_54695600
ES.7559.1	chr12	+	238	1	Intergenic	novelGene_6213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTGCTGTTGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	54716266	54716504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54716300_54716500
ES.756.1	chr1	+	5248	27	FSM	ENSMUSG00000033276.19	ENSMUST00000087183.11	5245	27	-6	3	-6	0	multi-exon	FALSE	canonical	0	0	junction_6	4.82044462581332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTGTGATTATCT	NA	False	NA	NA	False	ATTAAA	-15	NA	74640597	74676050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74640773_74641187_74641361_74642296_74642438_74642555_74642634_74644547_74644679_74648170_74648421_74649930_74650025_74650247_74650418_74650559_74650748_74651844_74651945_74655734_74655879_74661354_74661535_74662443_74662542_74662988_74663095_74664651_74664803_74665171_74665300_74665701_74665807_74666553_74666653_74666743_74666833_74667076_74667141_74667300_74667412_74670744_74670826_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.756.2	chr1	+	4807	26	NIC	ENSMUSG00000033276.19	novel	5245	27	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_6	4.8536996198776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGATGACTTGAATCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	74640631	74675202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74640773_74641187_74641361_74642296_74642438_74642555_74642634_74644547_74644679_74648170_74648421_74649930_74650025_74650247_74650418_74650559_74650748_74651844_74651945_74655734_74655879_74661354_74661535_74662443_74663095_74664651_74664803_74665171_74665300_74665701_74665807_74666553_74666653_74666743_74666833_74667076_74667141_74667300_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.756.3	chr1	+	4344	27	NIC	ENSMUSG00000033276.19	novel	5245	27	NA	NA	7	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	4.85713042611904	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTATGATGACTTGAATC	NA	False	NA	NA	False	ATTAAA	-15	NA	74640645	74675200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74640773_74641187_74641361_74642296_74642438_74642555_74642634_74644547_74644679_74648170_74648421_74649930_74650025_74650247_74650418_74650559_74650748_74651844_74651945_74655734_74655879_74661354_74661535_74662443_74662542_74662988_74663095_74664651_74664803_74665171_74665300_74665701_74665807_74666553_74666653_74666743_74666833_74667076_74667141_74667300_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.756.4	chr1	+	2697	8	ISM	ENSMUSG00000033276.19	ENSMUST00000123154.2	3016	11	1398	3	1398	0	3prime_fragment	FALSE	canonical	2	5	junction_2	4.82341229032404	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTGTGATTATCT	757	False	NA	NA	False	ATTAAA	-15	NA	74667021	74676050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74667141_74667300_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.756.5	chr1	+	2911	6	NIC	ENSMUSG00000033276.19	novel	4065	24	NA	NA	1434	0	intron_retention	FALSE	canonical	0	0	junction_2	8.23164625090267	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTGTGATTATCT	793	False	NA	NA	False	ATTAAA	-15	NA	74667057	74676050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74667141_74670744_74670826_74671887_74672060_74672300_74672449_74672665_74673916_74674873
ES.756.6	chr1	+	2538	7	NIC	ENSMUSG00000033276.19	novel	3016	11	NA	NA	1446	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6.03922364399781	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGAGTGTGATTATCT	805	False	NA	NA	False	ATTAAA	-15	NA	74667069	74676050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74667141_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.756.7	chr1	+	1837	7	ISM	ENSMUSG00000033276.19	ENSMUST00000123154.2	3016	11	1567	854	1567	-3	3prime_fragment	FALSE	canonical	2	5	junction_1	4.87909372276815	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTATGATGACTTGAAT	926	False	NA	NA	False	ATTAAA	-14	NA	74667190	74675199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74667412_74670744_74670820_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ES.7560.1	chr12	+	157	1	Intergenic	novelGene_6214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	54724997	54725154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54725000_54725200
ES.7561.1	chr12	+	173	1	Intergenic	novelGene_6215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTCAGCCAGGCA	2373	False	NA	NA	False	NA	NA	NA	54732113	54732286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54732100_54732300
ES.7562.1	chr12	-	1147	7	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	4	-516	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	147.755052555084	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATTGGATCTGGAG	NA	False	NA	NA	False	TTTAAA	-8	NA	54742643	54717640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54717856_54720355_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.10	chr12	-	2627	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	3	355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.586559853781	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTGTTCATGTCCTTT	NA	False	NA	-7	True	AATAAA	-12	NA	54742625	54718084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718660_54719217_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.11	chr12	-	2653	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	non_canonical	2	22	junction_1	141.534153710921	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATACATT	NA	False	NA	NA	False	NA	NA	NA	54742660	54718435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.13	chr12	-	3876	8	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	197.250384754287	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATACATT	NA	False	NA	NA	False	NA	NA	NA	54742662	54718435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720636_54725294_54725409_54732644_54732757_54735920_54737142_54738784_54738881_54739559_54739742_54742495
ES.7562.14	chr12	-	2295	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	6	1885	6	-570	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCCTTTGGGTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	54742660	54719009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.15	chr12	-	3953	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	1	154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.234367552836	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTATTTGTTTCCTAGT	NA	False	NA	NA	False	ACTAAA	-12	NA	54742646	54720096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54720636_54725294_54725409_54732644_54734110_54735735_54737142_54738784_54738881_54739559_54739742_54742495
ES.7562.16	chr12	-	1174	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	39	2973	1	153	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTATTTGTTTCCTAG	NA	False	NA	NA	False	ACTAAA	-11	NA	54742627	54720097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.17	chr12	-	1064	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	3	3119	3	7	multi-exon	FALSE	canonical	3	353	junction_3	29.9973332148043	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTTATCAACCTCTATC	NA	False	NA	2	True	ATTAAA	-26	NA	54742663	54720243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.18	chr12	-	1360	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	191.234367552836	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGGAGTGGTTATCA	NA	False	NA	-7	True	ATTAAA	-17	NA	54742652	54720252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54720636_54725294_54725409_54732644_54732757_54736825_54737142_54738784_54738881_54739559_54739742_54742495
ES.7562.19	chr12	-	4567	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	4	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	191.234367552836	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGGAGTGGTTATCA	NA	False	NA	-7	True	ATTAAA	-17	NA	54742643	54720252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54720636_54725294_54725409_54732644_54734794_54735646_54737142_54738784_54738881_54739559_54739742_54742495
ES.7562.2	chr12	-	2659	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	9	359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.586559853781	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTCATGTCCTTTCATT	NA	False	NA	-3	True	AATAAA	-16	NA	54742638	54718080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718665_54719207_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.3	chr12	-	2876	6	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	4	358	at_least_one_novel_splicesite	FALSE	non_canonical	2	9	junction_2	189.204228282562	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATGTCCTTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	54742643	54718081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720636_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.5	chr12	-	2980	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	-6	358	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	149.586559853781	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATGTCCTTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	54742634	54718081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718638_54718854_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.6	chr12	-	4421	4	NNC	ENSMUSG00000054302.16	novel	4186	6	NA	NA	7993	358	at_least_one_novel_splicesite	TRUE	non_canonical	2	22	junction_1	174.139790589821	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATGTCCTTTCAT	104	False	NA	-4	True	AATAAA	-15	NA	54734613	54718081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720636_54725294_54725409_54732644
ES.7562.7	chr12	-	2927	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	4	355	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	182.233976585658	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTGTTCATGTCCTTT	NA	False	NA	-7	True	AATAAA	-12	NA	54742643	54718084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720576_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7562.8	chr12	-	3028	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	-2	355	at_least_one_novel_splicesite	FALSE	non_canonical	2	22	junction_1	141.534153710921	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATTGTTCATGTCCTTT	NA	False	NA	-7	True	AATAAA	-12	NA	54742684	54718084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54718634_54718849_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ES.7563.1	chr12	-	243	1	Intergenic	novelGene_6216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATTTTTTCAACAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	54743996	54743753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54743800_54744000
ES.7564.1	chr12	-	181	1	Intergenic	novelGene_6217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTAGTCATCACC	NA	False	NA	NA	False	NA	NA	NA	54747729	54747548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54747500_54747700
ES.7565.1	chr12	-	177	1	Intergenic	novelGene_6218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTAGTCGGGCT	NA	False	NA	NA	False	NA	NA	NA	54747922	54747745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54747700_54747900
ES.7566.1	chr12	+	182	1	Intergenic	novelGene_6219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	54762281	54762463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54762300_54762500
ES.7567.1	chr12	+	279	1	Intergenic	novelGene_6220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	54766383	54766662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54766400_54766700
ES.7568.1	chr12	+	230	1	Intergenic	novelGene_6222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTCCTCAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	54771208	54771438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54771200_54771400
ES.7569.1	chr12	-	1493	3	Intergenic	novelGene_6221	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTGCAACGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	54774570	54767780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54768903_54770195_54770350_54774353
ES.757.1	chr1	+	170	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAAATTTACCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	74679976	74680146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74680000_74680100
ES.7570.1	chr12	-	149	1	Intergenic	novelGene_6223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54780000	54779851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54779900_54780000
ES.7571.1	chr12	-	3752	1	FSM	ENSMUSG00000119206.1	ENSMUST00000179675.3	164	1	-174	-3414	-174	3414	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54785578	54781826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54781800_54785600
ES.7572.1	chr12	+	159	1	Intergenic	novelGene_6225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAGCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54833245	54833404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54833200_54833400
ES.7572.2	chr12	+	176	2	Antisense	novelGene_ENSMUSG00000005656.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATGCAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54833247	54852180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_54833317_54852073
ES.7572.3	chr12	+	178	1	Intergenic	novelGene_6227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATGCAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54852002	54852180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54852000_54852200
ES.7573.1	chr12	-	2944	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	27	-1043	11	1043	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATTCTGAAAATTTTT	NA	False	NA	NA	False	AAAAAG	-27	NA	54842461	54792090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.10	chr12	-	1928	14	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	11	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	298.343255705324	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTTTCTTTATCTTT	NA	False	NA	-2	True	AATAAA	-28	NA	54842461	54793125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830318_54830799_54830905_54842238_54842287_54842432
ES.7573.11	chr12	-	1806	13	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	305.781909845708	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTCTTTTCTTTATCT	NA	False	NA	-4	True	AATAAA	-26	NA	54842471	54793127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830799_54830905_54842238_54842287_54842432
ES.7573.12	chr12	-	3798	14	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	305.491881955689	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGTCTTTTCTTTATC	NA	False	NA	-5	True	AATAAA	-25	NA	54842452	54793128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54795746_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.13	chr12	-	2150	14	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	400.024451915352	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGTCTTTTCTTTAT	NA	False	NA	-6	True	AATAAA	-24	NA	54842287	54793129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54801634_54801727_54803639_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
ES.7573.14	chr12	-	2039	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	373.699493208768	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGGTCTTTTCTTTAT	NA	False	NA	-6	True	AATAAA	-24	NA	54842462	54793129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54835175_54835309_54842238_54842287_54842432
ES.7573.15	chr12	-	1932	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	382.420193088222	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAAGGTCTTTTCTTT	NA	False	NA	-8	True	AATAAA	-22	NA	54842453	54793131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54819014_54819052_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.16	chr12	-	1934	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	377.570002970121	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAAGGTCTTTTCTTT	NA	False	NA	-8	True	AATAAA	-22	NA	54842452	54793131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830301_54830433_54830472_54830799_54830905_54842238_54842287_54842432
ES.7573.17	chr12	-	1918	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	11	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	384.349702585485	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAAGGTCTTTTCTTT	NA	False	NA	-8	True	AATAAA	-22	NA	54842461	54793131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54812902_54812918_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.18	chr12	-	4091	13	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	5	-5	intron_retention	FALSE	canonical	3	824	junction_2	129.554659206924	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTACAGTGAAGGTCT	NA	False	NA	-15	True	AATAAA	-15	NA	54842467	54793138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54793845_54798566_54798653_54798725_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.2	chr12	-	2839	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	21	-932	5	932	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGTGTAATAGCCGA	NA	False	NA	5	True	NA	NA	NA	54842467	54792201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.20	chr12	-	1953	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	375.372094306001	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTACAGTGAAGGTCT	NA	False	NA	-15	True	AATAAA	-15	NA	54842462	54793138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54837514_54837571_54842238_54842287_54842432
ES.7573.21	chr12	-	1680	12	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	305.74115341668	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTACAGTGAAGGTC	NA	False	NA	-16	True	AATAAA	-14	NA	54842462	54793139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54842238_54842287_54842432
ES.7573.22	chr12	-	1874	13	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	312.988584722617	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTACAGTGAAGGTC	NA	False	NA	-16	True	AATAAA	-14	NA	54842287	54793139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801067_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
ES.7573.23	chr12	-	4740	13	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	313.968007482008	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGCTTTACAGTGAAGG	NA	False	NA	-18	True	AATAAA	-12	NA	54842287	54793141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54805491_54805938_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
ES.7573.25	chr12	-	1475	12	NNC	ENSMUSG00000005656.10	novel	1441	12	NA	NA	-18	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	413.034187046813	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGCATCCTGTTCCCT	NA	False	NA	-8	True	GATAAA	-20	NA	54842287	54793416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807256_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830799_54830905_54842238
ES.7573.26	chr12	-	1612	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	27	289	11	12	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTTAAGCATCCTG	NA	False	NA	-14	True	GATAAA	-14	NA	54842461	54793422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.27	chr12	-	1567	13	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	11	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	401.102023596657	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTTTTAAGCATCCT	NA	False	NA	-15	True	GATAAA	-13	NA	54842461	54793423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842283_54842432
ES.7573.28	chr12	-	2555	14	NNC	ENSMUSG00000005656.10	novel	436	6	NA	NA	-3	-3542	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	305.491881955689	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGTCTCAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54842452	54796976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54797161_54797376_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.3	chr12	-	2962	15	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	9	930	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	374.035637557794	496	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTGTGTAATAGCC	NA	False	NA	3	True	NA	NA	NA	54842463	54792203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54835179_54835309_54842238_54842287_54842432
ES.7573.30	chr12	-	1387	13	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	37	5226	-2	-4925	5prime_fragment	FALSE	canonical	3	824	junction_1	124.818840947813	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTATGTAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	54842451	54798359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.31	chr12	-	173	1	Intergenic	novelGene_6224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	54799169	54798996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54799000_54799200
ES.7573.32	chr12	-	1162	11	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	20	7730	4	2796	5prime_fragment	FALSE	canonical	3	826	junction_10	112.831910379998	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCTGGAGCAAGACA	NA	False	NA	NA	False	NA	NA	NA	54842468	54800863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.33	chr12	-	1095	10	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	-18	10494	-18	32	5prime_fragment	FALSE	canonical	3	826	junction_9	114.99565209172	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGGTGACATGTCAAC	NA	False	NA	0	True	AATAAA	-24	NA	54842506	54803627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.34	chr12	-	1010	8	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	393.448749352882	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAATAAAAATT	NA	False	NA	-32	True	NA	NA	NA	54842429	54803659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54830187_54830299_54830799_54830905_54842238
ES.7573.36	chr12	-	1362	3	FSM	ENSMUSG00000005656.10	ENSMUST00000219302.2	732	3	-6	-624	-6	624	multi-exon	FALSE	canonical	3	1205	junction_1	17	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTTTTCTGGATCTAT	NA	False	NA	NA	False	NA	NA	NA	54842443	54829246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54830299_54830799_54830905_54842238
ES.7573.4	chr12	-	2700	13	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-3	930	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	308.873176059186	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTGTGTAATAGCC	NA	False	NA	3	True	NA	NA	NA	54842452	54792203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.5	chr12	-	2848	14	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-3	930	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	303.241618663964	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGGTGTGTAATAGCC	NA	False	NA	3	True	NA	NA	NA	54842452	54792203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842313_54842432
ES.7573.6	chr12	-	2720	13	NIC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	11	925	combination_of_known_splicesites	FALSE	canonical	2	20	junction_6	311.194026649327	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATGTGAAGGTGTGTAA	NA	False	NA	-2	True	NA	NA	NA	54842461	54792208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7573.7	chr12	-	2835	14	NNC	ENSMUSG00000005656.10	novel	1928	14	NA	NA	-4	923	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	298.343255705324	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTGAAGGTGTGT	NA	False	NA	-4	True	NA	NA	NA	54842453	54792210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830318_54830799_54830905_54842238_54842287_54842432
ES.7573.8	chr12	-	1944	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	-8	-8	-8	8	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTTTTCTTTATCTTT	NA	False	NA	-2	True	AATAAA	-28	NA	54842496	54793125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ES.7574.1	chr12	-	445	1	Intergenic	novelGene_6226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GACAAAAAACAAACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	54846796	54846351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54846400_54846800
ES.7575.1	chr12	-	153	1	Intergenic	novelGene_6228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATATAAATAAATAAA	9092	False	NA	NA	False	NA	NA	NA	54853994	54853841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54853800_54854000
ES.7576.1	chr12	-	229	1	Intergenic	novelGene_6229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTGGGACCCCATCTG	5566	False	NA	NA	False	NA	NA	NA	54861635	54861406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54861400_54861600
ES.7577.1	chr12	+	346	1	Intergenic	novelGene_6230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	54862349	54862695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54862300_54862700
ES.7578.1	chr12	-	153	1	Intergenic	novelGene_6231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAATAAAACCATT	NA	False	NA	NA	False	NA	NA	NA	54901480	54901327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54901300_54901500
ES.7579.1	chr12	+	172	1	Intergenic	novelGene_6232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	54902960	54903132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54903000_54903100
ES.758.1	chr1	+	172	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	74689097	74689269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74689100_74689300
ES.7580.1	chr12	-	2873	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-254	-1491	-175	4	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGATGTGTTTACTTGCA	NA	False	NA	1	True	AATAAA	-24	NA	54909837	54905589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ES.7580.10	chr12	-	1570	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	58	1312	-21	167	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCTTATTTATGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	54909604	54906913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ES.7580.11	chr12	-	1592	4	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-56	3	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	126.518334200577	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTTGTTTTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	54909457	54907077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54908023_54908121_54908199_54908310_54908619_54909195
ES.7580.12	chr12	-	1484	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-20	1476	-20	3	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGCCTTGTTTTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	54909682	54907077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ES.7580.13	chr12	-	1199	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-69	-2	10	2	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGCCTTGTTTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	54909652	54907078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ES.7580.14	chr12	-	1452	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-212	1486	-133	1	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGCCTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	54909795	54907079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ES.7580.16	chr12	-	1629	2	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-37	-1	intron_retention	FALSE	canonical	3	292	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTTGCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54909620	54907081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54908619_54909528
ES.7580.17	chr12	-	1485	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221088.2	474	4	-258	-753	86	-1	multi-exon	FALSE	canonical	3	25	junction_3	144.270579121316	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAATGTTGCCTTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54909497	54907081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909195
ES.7580.18	chr12	-	910	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-29	2059	-29	174	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGAACGTTACAATGGA	NA	False	NA	NA	False	AAAACA	-22	NA	54909691	54907660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ES.7580.19	chr12	-	230	3	ISM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-41	1038	38	236	5prime_fragment	FALSE	canonical	3	53	junction_1	119.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGACTGTTCTGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	54909624	54908118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54908199_54908564_54908619_54909528
ES.7580.2	chr12	-	2986	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	-38	-8	-38	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGAGATGTGTTTACT	NA	False	NA	-3	True	AATAAA	-20	NA	54909700	54905593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ES.7580.3	chr12	-	3060	3	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	292	junction_2	21	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTTGAGATGTGTTT	NA	False	NA	-6	True	AATAAA	-17	NA	54909665	54905596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54908023_54908121_54908619_54909528
ES.7580.4	chr12	-	3991	2	FSM	ENSMUSG00000062929.9	ENSMUST00000223320.2	1160	2	-1168	-1663	-29	0	multi-exon	FALSE	canonical	3	334	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909691	54905601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121
ES.7580.5	chr12	-	2813	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	-115	28	-36	-20	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909698	54905621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ES.7580.6	chr12	-	3067	4	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-75	-20	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	126.518334200577	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909476	54905621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54908023_54908121_54908199_54908310_54908619_54909195
ES.7580.7	chr12	-	3625	1	NIC	ENSMUSG00000062929.9	novel	2726	4	NA	NA	-7	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909246	54905621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54905600_54909200
ES.7580.8	chr12	-	1457	5	NNC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	-21	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	126.263613127456	195	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909683	54905621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54906484_54907601_54907657_54908121_54908199_54908310_54908619_54909528
ES.7580.9	chr12	-	2945	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221088.2	474	4	-258	-2213	86	-20	multi-exon	FALSE	canonical	3	25	junction_3	144.270579121316	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	False	NA	-31	True	NA	NA	NA	54909497	54905621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909195
ES.7581.1	chr12	-	169	1	Intergenic	novelGene_6233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	7071	False	NA	NA	False	NA	NA	NA	54916051	54915882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54915900_54916100
ES.7582.1	chr12	-	176	1	Intergenic	novelGene_6234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATTTTAAAAAGA	6548	False	NA	NA	False	NA	NA	NA	54916574	54916398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54916400_54916600
ES.7583.1	chr12	+	251	1	Intergenic	novelGene_6235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAGAAAAACAGCAATA	NA	False	NA	NA	False	NA	NA	NA	54920793	54921044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54920800_54921000
ES.7584.1	chr12	-	174	1	Intergenic	novelGene_6236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	54923736	54923562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54923600_54923700
ES.7585.1	chr12	+	213	1	Intergenic	novelGene_6237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGGAGCCCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	54935262	54935475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54935300_54935500
ES.7586.1	chr12	+	104	1	Intergenic	novelGene_6238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAAGGCGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	54978279	54978383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54978300_54978400
ES.7587.1	chr12	+	236	1	Intergenic	novelGene_6239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAACCTCCAAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	54984668	54984904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_54984700_54984900
ES.7588.1	chr12	+	175	1	Intergenic	novelGene_6241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAGAATTAAG	NA	False	NA	NA	False	NA	NA	NA	55026509	55026684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55026500_55026700
ES.7589.10	chr12	-	5581	27	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.77415079015251	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	55033136	54940335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942865_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ES.7589.13	chr12	-	5546	27	NIC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	10.0899064920222	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	55033136	54940335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974410_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ES.7589.14	chr12	-	4656	21	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	6372	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	12.3125951772971	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCTGAATTCTGAAG	1907	False	NA	-10	True	AATAAA	-16	NA	54984465	54940337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970257_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54984350
ES.7589.17	chr12	-	5598	27	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	10.0766294731156	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTTCTGAATTCTGAA	NA	False	NA	-11	True	AATAAA	-15	NA	55033138	54940338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022135_55032450_55032593_55032946
ES.7589.18	chr12	-	5661	27	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	9.57684584460672	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTTCTGAATTCTGAA	NA	False	NA	-11	True	AATAAA	-15	NA	55033162	54940338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032599_55032946
ES.7589.19	chr12	-	2298	1	NIC	ENSMUSG00000035021.14	novel	6188	27	NA	NA	-698	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTTCTGAATTCTGA	NA	False	NA	-12	True	AATAAA	-14	NA	54942637	54940339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_54940300_54942600
ES.7589.2	chr12	-	6896	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	173	-1281	2	719	multi-exon	TRUE	canonical	2	19	junction_26	7.265566842199	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTTGGTTCATCTCT	NA	False	NA	NA	False	AATAAA	-12	NA	55033119	54939054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ES.7589.21	chr12	-	200	1	Intergenic	novelGene_6240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTCTAAGTCCTAGAGC	9220	False	NA	NA	False	NA	NA	NA	54989911	54989711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_54989700_54989900
ES.7589.3	chr12	-	6117	26	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	607	-582	36	20	3prime_fragment	FALSE	canonical	2	24	junction_21	6.49307323229917	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAGGAGGAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	55032685	54939753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450
ES.7589.4	chr12	-	6092	27	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	74	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	10.0766294731156	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAGGAGGAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	55033047	54939753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022135_55032450_55032593_55032946
ES.7589.5	chr12	-	5746	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	52	-10	52	10	multi-exon	FALSE	canonical	2	19	junction_26	7.265566842199	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAAGTTTTTGCAAATT	NA	False	NA	2	True	AATAAA	-28	NA	55033240	54940325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ES.7589.6	chr12	-	4679	21	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	6367	7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	9.86711710683521	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGAAGTTTTTGCAA	1902	False	NA	-1	True	AATAAA	-25	NA	54984470	54940328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54984350
ES.7589.7	chr12	-	5758	28	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	-21	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	11.7284080571728	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCTGAAGTTTTTGCA	NA	False	NA	-2	True	AATAAA	-24	NA	55033142	54940329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54983254_54983369_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ES.7589.9	chr12	-	5298	15	ISM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	61632	0	5464	0	3prime_fragment	FALSE	canonical	2	33	junction_1	6.1145527311522	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	54971660	54940335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169
ES.759.1	chr1	+	4526	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-181	5674	-181	79	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCTTGTTCTGTAAAT	NA	False	NA	89	True	AAAACA	-13	NA	74700722	74737215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.10	chr1	+	6678	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.0931699106756	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700885	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.11	chr1	+	6912	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-17	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5398217573483	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	21	True	NA	NA	NA	74700886	74740983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.12	chr1	+	8969	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-17	-5	intron_retention	FALSE	canonical	3	108	junction_14	13.9013277632119	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700886	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.13	chr1	+	4941	18	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-11	-5	intron_retention	FALSE	canonical	1	1	junction_1	35.2683239080095	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700892	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.14	chr1	+	8154	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-11	-8	intron_retention	FALSE	canonical	0	0	junction_19	33.8072588052098	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	21	True	NA	NA	NA	74700892	74740983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736569
ES.759.15	chr1	+	4393	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-10	-5	intron_retention	FALSE	canonical	0	0	junction_4	43.8639943461605	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700893	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720246_74720369_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.16	chr1	+	8792	18	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-7	-5	intron_retention	FALSE	canonical	1	1	junction_1	35.2683239080095	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700896	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.17	chr1	+	8237	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-5	-7	intron_retention	FALSE	canonical	3	12	junction_1	31.429647065811	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700898	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701167_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.18	chr1	+	5144	19	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	1	-5	intron_retention	FALSE	canonical	0	0	junction_2	34.9888871246603	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700904	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712218_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.19	chr1	+	8085	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	1	-7	intron_retention	FALSE	canonical	2	4	junction_3	33.3369434794796	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700904	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720486_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.2	chr1	+	8228	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-106	1897	-106	1	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTTGGGATCTAACC	NA	False	NA	30	True	NA	NA	NA	74700797	74740992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.20	chr1	+	3884	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.5220449853526	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700905	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719138_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.21	chr1	+	8244	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	2	-1	intron_retention	FALSE	canonical	3	108	junction_15	15.0476609067799	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTGTTGGGATCTAA	NA	False	NA	28	True	NA	NA	NA	74700905	74740990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735972_74736337_74736409_74736599
ES.759.22	chr1	+	3040	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5398217573483	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700906	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.23	chr1	+	6547	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-2	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	34.5648433391753	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700906	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.24	chr1	+	5898	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	5	4116	0	-264	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTAAGTGTACT	NA	False	NA	NA	False	AGTAAA	-14	NA	74700908	74738773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.26	chr1	+	8025	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	1	-7	intron_retention	FALSE	canonical	0	0	junction_9	34.7742720987802	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700909	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.27	chr1	+	7935	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.5220449853526	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700909	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719340_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.28	chr1	+	5669	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	43.3662022778108	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700910	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599_74739384_74740367
ES.759.29	chr1	+	2631	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	34.5028179203445	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700910	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.3	chr1	+	1869	8	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-105	1021	intron_retention	FALSE	canonical	2	3	junction_3	50.3181713434316	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCATCAGAAGGTGGG	NA	False	NA	NA	False	NA	NA	NA	74700798	74725537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74718091_74719512_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475
ES.759.30	chr1	+	2922	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	52.1459171546563	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700911	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720486_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729419_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.31	chr1	+	4223	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	5	-5	intron_retention	FALSE	canonical	2	4	junction_3	33.3369434794796	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700913	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720486_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.32	chr1	+	4079	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	11	-4	intron_retention	FALSE	canonical	1	1	junction_1	34.5028179203445	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCCATGTGTGAT	NA	False	NA	6	True	TATAAA	-18	NA	74700919	74737132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.33	chr1	+	3659	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	12	-4	intron_retention	FALSE	canonical	2	3	junction_3	33.5411435441505	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCCATGTGTGAT	NA	False	NA	6	True	TATAAA	-18	NA	74700920	74737132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74718091_74719512_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.34	chr1	+	4547	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	23	-136	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.0931699106756	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACGTGAGACCTACCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	74700931	74738901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.35	chr1	+	5968	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	25	-263	intron_retention	FALSE	canonical	0	0	junction_4	43.8639943461605	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTTGTAAGTGTACTT	NA	False	NA	NA	False	AGTAAA	-15	NA	74700933	74738774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720246_74720369_74720486_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.36	chr1	+	6749	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	31	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.1551778986045	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	21	True	NA	NA	NA	74700939	74740983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.37	chr1	+	6847	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.44108078766	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGTGTTGGGATCTAA	NA	False	NA	28	True	NA	NA	NA	74700939	74740990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74719512_74719623_74720477_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.38	chr1	+	4336	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	33	-6	intron_retention	FALSE	canonical	0	0	junction_3	42.965360008556	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGAGAGCCATGTGTG	NA	False	NA	4	True	TATAAA	-16	NA	74700941	74737130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701167_74712002_74712170_74718056_74719619_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.39	chr1	+	3125	22	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-32	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	50.0191799947474	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700943	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74719512_74719623_74720246_74720369_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.4	chr1	+	5266	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-76	88	intron_retention	FALSE	canonical	3	108	junction_14	13.9013277632119	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGTAAATGAGAGGAAT	NA	False	NA	98	True	AAAACA	-22	NA	74700827	74737224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.40	chr1	+	4479	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-32	-263	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.858687708761	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTTGTAAGTGTACTT	NA	False	NA	NA	False	AGTAAA	-15	NA	74700943	74738774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74718056_74718295_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.42	chr1	+	2613	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	44.1472604973206	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACTGAGAGCCATGTGT	NA	False	NA	3	True	TATAAA	-15	NA	74700960	74737129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74718056_74718091_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.43	chr1	+	6326	18	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-15	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.4874118721566	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	NA	False	NA	24	True	NA	NA	NA	74700960	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.44	chr1	+	2728	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	5	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	33.0931699106756	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74700980	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.45	chr1	+	8082	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	8	-7	intron_retention	FALSE	canonical	0	0	junction_2	34.3098154309091	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700983	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712218_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.46	chr1	+	6354	15	ISM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	94	10449	22	2603	5prime_fragment	FALSE	canonical	3	115	junction_3	13.6157172085073	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74700997	74732440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118
ES.759.47	chr1	+	8142	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	22	-7	intron_retention	FALSE	canonical	0	0	junction_4	43.8639943461605	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	NA	False	NA	22	True	NA	NA	NA	74700997	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74719623_74720246_74720369_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.48	chr1	+	5091	19	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	52	-5	intron_retention	FALSE	canonical	3	12	junction_1	32.0451070974788	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	False	NA	5	True	TATAAA	-17	NA	74701027	74737131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701167_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.49	chr1	+	7978	19	ISM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	11097	1898	-6056	0	3prime_fragment	FALSE	canonical	3	108	junction_14	14.3661338734238	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTGTTGGGATCTAAC	NA	False	NA	29	True	NA	NA	NA	74712000	74740991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.5	chr1	+	4499	20	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-71	-264	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	44.4125085322528	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTAAGTGTACT	NA	False	NA	NA	False	AGTAAA	-14	NA	74700832	74738773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74719512_74719623_74720477_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.50	chr1	+	4547	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-6037	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	33.4566699692617	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGATAGCTCATACCC	NA	False	NA	NA	False	AAGAAA	-26	NA	74712019	74739035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74712170_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.52	chr1	+	5786	18	NNC	ENSMUSG00000033257.15	novel	3762	17	NA	NA	-1045	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	35.4874118721566	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGCCATGTGTGATTT	738	False	NA	8	True	TATAAA	-20	NA	74717011	74737134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74717644_74717690_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.53	chr1	+	7133	19	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	296	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.7127987212459	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTCAGTGTTGGGAT	2079	False	NA	24	True	NA	NA	NA	74718352	74740986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74719138_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.54	chr1	+	4296	18	ISM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	18571	3993	1418	-141	3prime_fragment	FALSE	canonical	3	108	junction_13	14.2292160091586	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGGAACGTGAGACCTA	3201	False	NA	NA	False	AATAAA	-16	NA	74719474	74738896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.55	chr1	+	6823	16	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	2472	-7	intron_retention	FALSE	canonical	3	108	junction_11	13.589211407093	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTCAGTGTTGGG	4255	False	NA	22	True	NA	NA	NA	74720528	74740984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.56	chr1	+	232	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAATGAATTACCAAAC	6167	False	NA	NA	False	NA	NA	NA	74722440	74722672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74722400_74722700
ES.759.57	chr1	+	3966	2	FSM	ENSMUSG00000033257.15	ENSMUST00000155753.2	754	2	-585	-2627	-585	2627	multi-exon	FALSE	canonical	3	136	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTTTTTTTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	74727996	74732464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74728617_74729118
ES.759.58	chr1	+	4300	1	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-417	2627	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTTTTTTTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	74728164	74732464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74728200_74732500
ES.759.59	chr1	+	1850	6	NIC	ENSMUSG00000033257.15	novel	5078	7	NA	NA	-39	1	intron_retention	FALSE	canonical	1	1	junction_1	58.5026495126503	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCATGTGTGATTTATT	NA	False	NA	11	True	TATAAA	-23	NA	74729192	74737137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74730049_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.6	chr1	+	9591	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	-53	481	-53	-481	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTGCGTTATCTAT	NA	False	NA	NA	False	NA	NA	NA	74700850	74742408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.7	chr1	+	5251	21	NNC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-41	261	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	32.5398217573483	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGATAGTTTGGTTCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	74700862	74739298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_74701049_74712002_74712170_74718056_74718295_74719512_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.8	chr1	+	9396	18	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-23	0	intron_retention	FALSE	canonical	3	108	junction_13	13.2654558285458	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTGTTGGGATCTAAC	NA	False	NA	29	True	NA	NA	NA	74700880	74740991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.759.9	chr1	+	6599	20	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	-18	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	34.1551778986045	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTTTTTCAGTGTTGG	NA	False	NA	21	True	NA	NA	NA	74700885	74740983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74701049_74712002_74712170_74718056_74718091_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ES.7590.1	chr12	+	183	1	Intergenic	novelGene_6242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTTTAAGTTGGG	NA	False	NA	NA	False	NA	NA	NA	55050188	55050371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55050200_55050400
ES.7591.1	chr12	-	179	1	Intergenic	novelGene_6243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAC	NA	False	NA	NA	False	NA	NA	NA	55088791	55088612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55088600_55088800
ES.7592.1	chr12	+	183	1	Intergenic	novelGene_6244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTACTATTTG	NA	False	NA	NA	False	NA	NA	NA	55111448	55111631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55111400_55111600
ES.7593.1	chr12	+	2717	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	-54	1835	-54	641	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTCGTGGTCCTTGATT	2522	False	NA	NA	False	NA	NA	NA	55126992	55160317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.10	chr12	+	2174	16	NNC	ENSMUSG00000073079.7	novel	4498	16	NA	NA	15	324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.666842837209	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATCAGTAAATTACATGAT	2855	False	NA	NA	False	TATAAA	-7	NA	55127325	55160000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55127629_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.11	chr12	+	2009	14	NIC	ENSMUSG00000073079.7	novel	1515	15	NA	NA	-28	386	intron_retention	FALSE	canonical	3	700	junction_5	99.1247495650373	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55135958	55160062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.12	chr12	+	160	1	Intergenic	novelGene_6245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	55145120	55145280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55145100_55145300
ES.7593.13	chr12	+	1181	5	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	15988	-638	15966	638	3prime_fragment	FALSE	canonical	3	830	junction_3	56.5044246055121	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTCTCGTGGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	55151974	55160314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.14	chr12	+	1567	1	Intergenic	novelGene_6246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCTTTCTATCACCCGT	NA	False	NA	NA	False	AATAAA	-18	NA	55153523	55155090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55153500_55155100
ES.7593.2	chr12	+	2456	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	-48	2090	-48	386	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	2528	False	NA	NA	False	AATAAA	-17	NA	55126998	55160062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.3	chr12	+	2254	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	259	1985	-5	491	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATGAGTATTAGAAAAT	2835	False	NA	NA	False	AATATA	-14	NA	55127305	55160167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.5	chr12	+	3329	15	NIC	ENSMUSG00000073079.7	novel	4498	16	NA	NA	7	389	intron_retention	FALSE	canonical	3	524	junction_1	137.580866758278	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2847	False	NA	NA	False	AATAAA	-20	NA	55127317	55160065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.6	chr12	+	2129	16	NNC	ENSMUSG00000073079.7	novel	4498	16	NA	NA	8	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	250.241128158866	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTTCGTTAACTTTCTT	2848	False	NA	NA	False	AATAAA	-18	NA	55127318	55160063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138107_55142595_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7593.8	chr12	+	1051	4	FSM	ENSMUSG00000073079.7	ENSMUST00000221479.2	1026	4	-25	0	9	0	multi-exon	FALSE	canonical	3	524	junction_1	150.738183616494	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTCTGTGTGTC	2849	False	NA	NA	False	AATAAA	-16	NA	55127319	55138680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033
ES.7593.9	chr12	+	4727	15	NNC	ENSMUSG00000073079.7	novel	4498	16	NA	NA	12	386	intron_retention	FALSE	canonical	0	0	junction_5	257.72340219859	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	2852	False	NA	NA	False	AATAAA	-17	NA	55127322	55160062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143897_55143961_55144040_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ES.7594.1	chr12	+	1424	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	-10	2508	-10	-2508	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGATTTCCTTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	55171243	55186381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ES.7594.10	chr12	+	203	1	Genic_Genomic	ENSMUSG00000095595.3	novel	NA	NA	NA	NA	17437	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCAGAGTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	55188690	55188893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_55188700_55188900
ES.7594.2	chr12	+	2967	4	ISM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	0	2515	0	-2515	intron_retention	FALSE	canonical	3	106	junction_2	7.87400787401181	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCACTGTGGATTTCC	NA	False	NA	NA	False	AATAAA	-11	NA	55171253	55186374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902
ES.7594.3	chr12	+	5079	6	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	11	1382	intron_retention	TRUE	non_canonical	0	0	junction_5	44.2067868092672	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTCTCACCCCAGTTC	NA	False	NA	NA	False	NA	NA	NA	55171264	55190271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560_55188689_55188902
ES.7594.4	chr12	+	3488	1	NIC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	11	-14137	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTGTGAATATTT	NA	False	NA	NA	False	AGTAAA	-18	NA	55171264	55174752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55171300_55174800
ES.7594.5	chr12	+	810	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	20	3092	20	-3092	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTCCAATCAGGAGC	NA	False	NA	NA	False	TATAAA	-13	NA	55171273	55185797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ES.7594.6	chr12	+	3939	6	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	29	260	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.2067868092672	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTGTACAAGTTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	55171282	55189149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560_55188689_55188902
ES.7594.7	chr12	+	1202	3	NIC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	40	-2515	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	60	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCACTGTGGATTTCC	NA	False	NA	NA	False	AATAAA	-11	NA	55171293	55186374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55171508_55177400_55177575_55185560
ES.7594.8	chr12	+	3506	3	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	6192	260	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	2	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTGTACAAGTTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	55177445	55189149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55177575_55185560_55188691_55188902
ES.7594.9	chr12	+	1693	4	NNC	ENSMUSG00000095595.3	novel	3922	5	NA	NA	9126	-2512	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.2181697607558	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTGTGGATTTCCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	55180379	55186377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55181091_55182452_55182520_55183902_55184001_55185560
ES.7595.1	chr12	+	2455	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	-45	1236	-45	-1236	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	2309	False	NA	NA	False	AATAAA	-17	NA	55201843	55235122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7595.12	chr12	+	3722	16	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	8	-1229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	242.157763084775	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTAACTTTCTTTAAGGT	2628	False	NA	NA	False	AATAAA	-24	NA	55202162	55235129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55234420_55234458
ES.7595.2	chr12	+	2265	15	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	-29	-984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	329.539884861128	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTCTCGTGGTCCTTG	2325	False	NA	NA	False	NA	NA	NA	55201859	55235374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55202014_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7595.3	chr12	+	2600	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	227	819	-39	-819	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTTGGTTCATTGAT	2581	False	NA	NA	False	ATTAAA	-16	NA	55202115	55235539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7595.4	chr12	+	2419	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	247	980	-19	-980	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCGTGGTCCTTGATTG	2601	False	NA	NA	False	NA	NA	NA	55202135	55235378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7595.6	chr12	+	3777	15	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	254	1233	-12	-1233	intron_retention	FALSE	canonical	3	704	junction_7	106.550744833107	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2608	False	NA	NA	False	AATAAA	-20	NA	55202142	55235125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930
ES.7595.7	chr12	+	3428	14	NIC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	-12	-1233	intron_retention	FALSE	canonical	3	704	junction_5	99.347516295491	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2608	False	NA	NA	False	AATAAA	-20	NA	55202142	55235125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7595.9	chr12	+	2125	16	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	8	-1238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	244.934240608009	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGTTCGTTAACTTT	2628	False	NA	NA	False	AATAAA	-15	NA	55202162	55235120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55202357_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ES.7596.1	chr12	+	3941	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-74	-4	-74	4	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCAGAGTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	55246302	55263957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
ES.7596.2	chr12	+	3821	6	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	-33	139	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	44.2067868092672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGATCCTTTGGTTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	55246343	55264092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624_55263753_55263966
ES.7596.3	chr12	+	793	4	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	-30	-3030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	58.4541605780879	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTACGGGAAAACCT	NA	False	NA	NA	False	AAAACA	-15	NA	55246346	55260923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55246572_55252464_55252639_55258966_55259065_55260627
ES.7596.4	chr12	+	5056	6	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	-30	1377	intron_retention	FALSE	non_canonical	0	0	junction_5	44.2067868092672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATACCCTTCTCACCCC	NA	False	NA	NA	False	NA	NA	NA	55246346	55265330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624_55263753_55263966
ES.7596.5	chr12	+	774	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-3	3092	-3	-3092	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTCCAATCAGGAGC	NA	False	NA	NA	False	TATAAA	-13	NA	55246373	55260861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
ES.7596.6	chr12	+	2084	1	ISM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	15017	476	15017	-476	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAAATCTTACTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	55261393	55263477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55261400_55263500
ES.7597.1	chr12	+	5348	16	Fusion	ENSMUSG00000079108.7_ENSMUSG00000112368.2	novel	3642	16	NA	NA	-42	3172	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTGTACAAGTTTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	55276910	55328671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
ES.7597.10	chr12	+	5597	1	Intergenic	novelGene_6248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGCTCCTGTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	55313550	55319147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55313600_55319100
ES.7597.2	chr12	+	2639	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	23	980	23	-164	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTCTCGTGGTCCTTG	NA	False	NA	NA	False	NA	NA	NA	55276975	55309641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ES.7597.3	chr12	+	2198	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	212	1232	212	-416	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTTCGTTAACTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	55277164	55309389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ES.7597.4	chr12	+	2527	16	Fusion	ENSMUSG00000079108.7_ENSMUSG00000112368.2	novel	3642	16	NA	NA	221	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	55277173	55326113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
ES.7597.5	chr12	+	1895	16	Fusion	ENSMUSG00000079108.7_ENSMUSG00000112368.2	novel	3642	16	NA	NA	274	35	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCTCCAATCAGGAGC	NA	False	NA	NA	False	TATAAA	-13	NA	55277226	55325534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
ES.7597.6	chr12	+	2008	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	274	1360	274	-544	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTGGTATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	55277226	55309261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ES.7597.9	chr12	+	180	1	Intergenic	novelGene_6247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55297118	55297298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55297100_55297300
ES.7598.1	chr12	+	3192	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	-63	-7	-63	7	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTTTTGCAGCGTCAA	NA	False	NA	26	True	AATAAA	-27	NA	55349358	55429288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ES.7598.2	chr12	+	2966	7	NNC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	4	-1	intron_retention	FALSE	canonical	2	4	junction_5	129.648777686315	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTAGTTGGTTTTGC	NA	False	NA	18	True	AATAAA	-19	NA	55349538	55429280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424010_55426066_55426263_55429041
ES.7598.3	chr12	+	3117	8	NNC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	14	-5	intron_retention	FALSE	canonical	0	0	junction_3	159.458394548035	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCAGTTTAGTTGGTT	NA	False	NA	14	True	AATAAA	-15	NA	55349548	55429276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55351670_55353123_55353172_55355521_55355655_55362618_55362746_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ES.7598.4	chr12	+	2178	8	NNC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	6	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	146.482429119729	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTTTCAGTTTAGTTG	NA	False	NA	11	True	AATAAA	-12	NA	55350033	55429273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55350077_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ES.7598.5	chr12	+	4513	6	NIC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	113	junction_3	122.458809401366	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCAGTTTAGTTGGTT	NA	False	NA	14	True	AATAAA	-15	NA	55350044	55429276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55426263_55429041
ES.7598.6	chr12	+	2203	8	NIC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	9	-8	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	145.251365513972	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTTTCAGTTTAGTTG	NA	False	NA	11	True	AATAAA	-12	NA	55350054	55429273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55350123_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ES.7598.7	chr12	+	6036	1	NIC	ENSMUSG00000021023.15	novel	888	7	NA	NA	4017	5749	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTGAAGTCCTGGAC	NA	False	NA	NA	False	NA	NA	NA	55354087	55360123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55354100_55360100
ES.7598.8	chr12	+	5300	1	NIC	ENSMUSG00000021023.15	novel	3122	7	NA	NA	73906	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCAGTTTAGTTGGTT	NA	False	NA	14	True	AATAAA	-15	NA	55423976	55429276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55424000_55429300
ES.7599.1	chr12	-	1153	8	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-103	0	multi-exon	FALSE	canonical	3	143	junction_4	24.4423520027957	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTCTTTTATTTGT	NA	False	NA	1	True	AATAAA	-40	NA	55201784	55092445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
ES.7599.10	chr12	-	4999	7	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	-1	-8	intron_retention	FALSE	canonical	3	37	junction_3	64.5172242290555	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATCTGAAAT	NA	False	NA	-22	True	AATAAA	-17	NA	55126896	55092468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55092729_55095671_55095763_55100085_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.11	chr12	-	5001	7	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-58	-8	intron_retention	FALSE	canonical	3	37	junction_3	62.3074812700868	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATCTGAAAT	NA	False	NA	-22	True	AATAAA	-17	NA	55201739	55092468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55092729_55095671_55095763_55100085_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55201606
ES.7599.12	chr12	-	3323	1	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	5095	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATCTGAAAT	NA	False	NA	-22	True	AATAAA	-17	NA	55095791	55092468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55092500_55095800
ES.7599.13	chr12	-	1167	8	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	-3	-8	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	59.7586984531652	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATCTGAAAT	NA	False	NA	-22	True	AATAAA	-17	NA	55126898	55092468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.14	chr12	-	4779	6	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-58	-9	intron_retention	FALSE	canonical	1	2	junction_4	81.9160545924912	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATATATCTGAAA	NA	False	NA	-23	True	AATAAA	-16	NA	55201739	55092469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55092729_55095671_55095763_55100085_55104138_55106241_55106364_55109772_55109895_55201606
ES.7599.15	chr12	-	3517	5	ISM	ENSMUSG00000062198.6	ENSMUST00000222572.2	798	6	-43	1158	-37	-714	5prime_fragment	FALSE	canonical	3	37	junction_1	70.9449610613749	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAATAAGTGTATTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	55126932	55101252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.16	chr12	-	2050	5	ISM	ENSMUSG00000062198.6	ENSMUST00000222572.2	798	6	-356	2938	-350	-2494	5prime_fragment	FALSE	canonical	3	37	junction_1	70.9449610613749	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55127245	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.17	chr12	-	3725	4	NIC	ENSMUSG00000062198.6	novel	4110	5	NA	NA	-3	-2494	intron_retention	FALSE	canonical	3	175	junction_2	23.4236347876812	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126898	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.18	chr12	-	3495	4	NIC	ENSMUSG00000062198.6	novel	798	6	NA	NA	-1	-2494	intron_retention	FALSE	canonical	3	37	junction_1	80.8001650163332	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126896	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55104138_55106159_55106364_55107839_55109895_55126765
ES.7599.19	chr12	-	1644	5	FSM	ENSMUSG00000062198.6	ENSMUST00000156852.2	4110	5	-28	2494	-26	-2494	multi-exon	FALSE	canonical	3	143	junction_1	29.9864552756741	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126921	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.2	chr12	-	835	6	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-48	-2	multi-exon	FALSE	canonical	3	8	junction_4	79.6552572025224	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCTCTTTTATTT	NA	False	NA	-1	True	AATAAA	-38	NA	55201729	55092447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55109772_55109895_55201606
ES.7599.20	chr12	-	5191	3	NIC	ENSMUSG00000062198.6	novel	4110	5	NA	NA	1	-2494	intron_retention	FALSE	canonical	3	175	junction_1	26	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126888	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55107979_55109772_55109895_55126765
ES.7599.21	chr12	-	6985	2	NIC	ENSMUSG00000062198.6	novel	4110	5	NA	NA	1	-2494	intron_retention	FALSE	canonical	3	227	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126888	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55109895_55126765
ES.7599.22	chr12	-	1584	5	NNC	ENSMUSG00000062198.6	novel	4110	5	NA	NA	-350	-2494	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	71.9943574177866	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55127245	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55127149
ES.7599.23	chr12	-	1641	5	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	4110	5	NA	NA	-78	-2494	multi-exon	FALSE	canonical	3	143	junction_1	23.0705439901187	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55201759	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55201606
ES.7599.24	chr12	-	1705	5	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	798	6	NA	NA	-60	-2494	multi-exon	FALSE	canonical	3	37	junction_1	66.4417037710503	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55201741	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55201606
ES.7599.25	chr12	-	1848	6	NNC	ENSMUSG00000062198.6	novel	798	6	NA	NA	1	-2494	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	82.0502285188774	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGATAAGTGATCAGCA	NA	False	NA	NA	False	NA	NA	NA	55126888	55103032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55110008_55110164_55126765
ES.7599.26	chr12	-	5482	3	NIC	ENSMUSG00000062198.6	novel	798	6	NA	NA	0	-2522	intron_retention	FALSE	canonical	3	180	junction_1	23.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55126889	55103060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55106364_55107839_55109895_55126765
ES.7599.27	chr12	-	1066	4	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	4110	5	NA	NA	-53	-5148	multi-exon	FALSE	canonical	3	175	junction_2	14.522013940528	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTTTTGGGTGGCCA	NA	False	NA	NA	False	ACTAAA	-14	NA	55201734	55105686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55106364_55107839_55107979_55109772_55109895_55201606
ES.7599.28	chr12	-	4364	1	FSM	ENSMUSG00000113137.2	ENSMUST00000220953.2	450	1	-3514	-400	-3514	400	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	55118500	55114136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55114100_55118500
ES.7599.29	chr12	-	532	1	FSM	ENSMUSG00000113137.2	ENSMUST00000220953.2	450	1	160	-242	160	242	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGTTCTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	55114826	55114294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55114300_55114800
ES.7599.3	chr12	-	1452	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	-354	7	-354	-7	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGTTTGCTCTTT	NA	False	NA	-6	True	AATAAA	-33	NA	55127249	55092452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.30	chr12	-	6064	1	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	1	-20286	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAATTCTATTACTCG	NA	False	NA	NA	False	NA	NA	NA	55126888	55120824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55120800_55126900
ES.7599.31	chr12	-	2612	2	Antisense	novelGene_ENSMUSG00000113693.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	55242563	55181434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_55181540_55240056
ES.7599.32	chr12	-	5119	15	Fusion	ENSMUSG00000021022.10_ENSMUSG00000112022.3	novel	850	8	NA	NA	7	3782	multi-exon	TRUE	non_canonical	0	0	junction_1	102.514409141509	181	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTACCGTTGGTTCATT	NA	False	NA	NA	False	AATATA	-36	NA	55349776	55185111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55188683_55188896_55189069_55190157_55190218_55192016_55192155_55195887_55196025_55196405_55196482_55196565_55196622_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
ES.7599.33	chr12	-	1935	8	FSM	ENSMUSG00000112022.3	ENSMUST00000219562.3	850	8	-51	-1034	-51	1034	multi-exon	FALSE	canonical	2	2	junction_7	67.4325059384779	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTCTAGGTCTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	55201732	55187859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55189069_55190157_55190218_55192016_55192155_55195887_55196025_55196405_55196482_55196565_55196622_55197660_55197794_55201606
ES.7599.34	chr12	-	3096	17	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-180	66169	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.839311521392	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGCCCGGCTCTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	55349963	55259606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55259845_55271789_55271882_55324497_55325450_55328339_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
ES.7599.35	chr12	-	1710	6	NNC	ENSMUSG00000112690.3	novel	847	8	NA	NA	5087	1135	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	70.887516531474	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55271658	55262825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55264133_55265221_55265282_55267080_55267182_55270951_55271089_55271469_55271546_55271629
ES.7599.36	chr12	-	784	1	Antisense	novelGene_ENSMUSG00000094103.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTTGTCTAGGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	55263711	55262927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_55262900_55263700
ES.7599.37	chr12	-	1214	8	FSM	ENSMUSG00000112690.3	ENSMUST00000220144.3	847	8	-31	-336	-31	336	multi-exon	FALSE	canonical	2	2	junction_7	67.4325059384779	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACAGCAAATATCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	55276776	55263624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55264133_55265221_55265282_55267080_55267219_55270951_55271089_55271469_55271546_55271629_55271686_55272724_55272858_55276670
ES.7599.38	chr12	-	2460	11	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-115	-1456	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	85.4534376137087	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATAAATTTTATAGCTC	NA	False	NA	NA	False	AATAAA	-16	NA	55349562	55327231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55344591_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.39	chr12	-	2610	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-5	-1723	intron_retention	FALSE	canonical	1	2	junction_3	116.729901149985	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55349788	55327498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331663_55332515_55332575_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.4	chr12	-	3376	4	NNC	ENSMUSG00000062198.6	novel	1160	3	NA	NA	-2080	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	100.645693179368	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGTTTGCTCTTT	NA	False	NA	-6	True	AATAAA	-33	NA	55102966	55092452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55092729_55095671_55095763_55099544_55099673_55100085
ES.7599.40	chr12	-	2372	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-125	-1723	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	78.6763765193989	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTATTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	55349572	55327498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.41	chr12	-	2426	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-3	-1738	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	94.9473849937941	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTTATGGTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	55349786	55327513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331663_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
ES.7599.42	chr12	-	2463	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-4	-1739	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	69.7240545793362	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTTTATGGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	55349787	55327514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
ES.7599.43	chr12	-	2474	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	-1	1743	-1	-1743	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGTGTTTATGGTT	NA	False	NA	NA	False	NA	NA	NA	55349784	55327518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ES.7599.44	chr12	-	2308	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	17	-1862	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	89.6424191641963	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTATTTTGTTTTA	NA	False	NA	NA	False	AATATA	-22	NA	55349766	55327637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ES.7599.45	chr12	-	2127	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	333	1875	-3	-1875	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGTATTCAAACAAA	NA	False	NA	NA	False	AATATA	-9	NA	55349450	55327650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.46	chr12	-	1670	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	337	2328	1	-2328	3prime_fragment	FALSE	canonical	3	216	junction_9	34.6025047262959	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGATTGGGGACAGGAG	NA	False	NA	NA	False	NA	NA	NA	55349446	55328103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.47	chr12	-	5541	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	28	-2508	intron_retention	FALSE	canonical	3	6	junction_3	93.7785141822061	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGCTTACTAGAGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	55349755	55328283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331663_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ES.7599.49	chr12	-	1732	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	-27	2511	-27	-2511	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	NA	False	AATAAA	-28	NA	55349810	55328286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ES.7599.5	chr12	-	719	5	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	91.499658469308	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGTTTGCTCTTT	NA	False	NA	-6	True	AATAAA	-33	NA	55126888	55092452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55092729_55095671_55095763_55100085_55100193_55109772_55109895_55126765
ES.7599.50	chr12	-	7023	12	NIC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-213	-2511	intron_retention	FALSE	canonical	3	69	junction_11	65.8489380675809	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	NA	False	AATAAA	-28	NA	55349996	55328286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ES.7599.51	chr12	-	1546	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	1	-2511	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	81.469830816894	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTTGCTTACTAGAG	NA	False	NA	NA	False	AATAAA	-28	NA	55349446	55328286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336637_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.52	chr12	-	1501	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-45	-2514	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	78.6763765193989	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATATCTTGCTTACTA	NA	False	NA	NA	False	AATAAA	-25	NA	55349492	55328289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.53	chr12	-	3237	2	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	17147	2516	13171	-2516	intron_retention	FALSE	canonical	3	293	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAATATCTTGCTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	55332636	55328291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55328591_55329698
ES.7599.54	chr12	-	4377	11	NIC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-3	-2518	intron_retention	FALSE	canonical	2	8	junction_8	86.4303766045249	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGCAAATATCTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	55349450	55328293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55328591_55329698_55329759_55331561_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55345195_55345301_55345678_55345807_55349378
ES.7599.55	chr12	-	1331	11	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-48	-2518	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	85.4534376137087	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGCAAATATCTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	55349495	55328293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55344591_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.56	chr12	-	1597	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-21	-2521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	100.034964301689	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACAGCAAATATCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	55349468	55328296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55346049_55346148_55349378
ES.7599.57	chr12	-	1417	12	NIC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-52	-2521	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	82.5254280872976	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACACAGCAAATATCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	55349499	55328296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55345195_55345301_55345678_55345807_55349378
ES.7599.59	chr12	-	1239	10	NIC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	-44	-2522	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	92.3569297299115	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACACAGCAAATATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	55349491	55328297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55345195_55345301_55345678_55345807_55349378
ES.7599.6	chr12	-	6939	2	ISM	ENSMUSG00000062198.6	ENSMUST00000136281.2	1160	3	-1448	-8	-1448	-7	intron_retention	FALSE	canonical	3	214	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGTTTGCTCTTT	NA	False	NA	-6	True	AATAAA	-33	NA	55102334	55092452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55092729_55095671
ES.7599.60	chr12	-	5307	12	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	7	-2522	intron_retention	FALSE	canonical	2	6	junction_3	118.940849247997	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACACAGCAAATATCTT	NA	False	NA	NA	False	AATAAA	-17	NA	55349776	55328297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55328591_55329698_55329759_55331561_55331663_55334705_55334838_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344591_55344676_55345195_55345301_55345678
ES.7599.62	chr12	-	1481	4	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	315	17742	-21	-1	internal_fragment	FALSE	canonical	3	267	junction_1	25.3508711224421	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTATGTCTTCATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55349468	55343517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55344676_55345195_55345301_55345678_55345807_55349378
ES.7599.7	chr12	-	4453	6	Fusion	ENSMUSG00000062198.6_ENSMUSG00000112022.3	novel	1105	8	NA	NA	-60	6	intron_retention	FALSE	canonical	3	37	junction_4	68.2348884369279	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTTTTGTTTGCTCT	NA	False	NA	-8	True	AATAAA	-31	NA	55201741	55092454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106159_55109895_55201606
ES.7599.8	chr12	-	4923	7	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	143	junction_3	29.2047370586805	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATCTGAAATGTTT	NA	False	NA	-18	True	AATAAA	-21	NA	55126898	55092464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55092729_55095671_55095763_55100085_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ES.7599.9	chr12	-	5359	7	NNC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	-340	-4	intron_retention	FALSE	canonical	1	1	junction_2	87.3632264361461	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATCTGAAATGTTT	NA	False	NA	-18	True	AATAAA	-21	NA	55127235	55092464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55092729_55095671_55095780_55100085_55104138_55106159_55106364_55107839_55107979_55109772_55109895_55126765
ES.76.1	chr1	+	180	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	9975746	9975926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_9975700_9975900
ES.760.1	chr1	+	199	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGTCACTTGATAT	NA	False	NA	NA	False	NA	NA	NA	74749455	74749654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74749500_74749700
ES.7600.1	chr12	-	145	1	Intergenic	novelGene_6249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	55356430	55356285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55356300_55356400
ES.7601.1	chr12	-	4552	1	Intergenic	novelGene_6250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAGGAGGAGGAAAA	6200	False	NA	NA	False	NA	NA	NA	55369820	55365268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55365300_55369800
ES.7601.2	chr12	-	186	1	Intergenic	novelGene_6251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACACACTACCACTGTT	7740	False	NA	NA	False	NA	NA	NA	55368280	55368094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55368100_55368300
ES.7602.1	chr12	-	746	2	Antisense	novelGene_ENSMUSG00000021024.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAACTCAGCTTCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	55438287	55437059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_55437482_55437963
ES.7603.1	chr12	-	87	1	FSM	ENSMUSG00000059033.8	ENSMUST00000161190.2	523	1	480	-44	480	44	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	55442534	55442447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55442400_55442500
ES.7604.1	chr12	+	1044	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	1	-3	1	3	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGCATCCTGTCTTTCTT	NA	False	NA	19	True	AATAAA	-20	NA	55445560	55465242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ES.7604.11	chr12	+	880	7	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	95	-3	at_least_one_novel_splicesite	FALSE	canonical	1	48	junction_6	958.192467907964	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCGGTGCATCCTGTC	NA	False	NA	13	True	AATAAA	-14	NA	55445674	55465236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465065
ES.7604.4	chr12	+	867	6	NIC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	57	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	1061.17791156808	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCGGTGCATCCTGTC	NA	False	NA	13	True	AATAAA	-14	NA	55445636	55465236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55465021
ES.7604.6	chr12	+	4695	6	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	85	0	65	0	intron_retention	FALSE	canonical	3	2423	junction_5	109.777957714652	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	55445644	55465239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188
ES.7604.8	chr12	+	966	7	NNC	ENSMUSG00000021024.15	novel	1042	7	NA	NA	82	-5	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_6	970.794934862948	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGGCGGTGCATCCTG	NA	False	NA	11	True	AATAAA	-12	NA	55445661	55465234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55464990
ES.7605.1	chr12	-	216	1	Intergenic	novelGene_6252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCTTTAATGTTGAAT	8294	False	NA	NA	False	NA	NA	NA	55458074	55457858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55457900_55458100
ES.7606.1	chr12	+	217	1	Intergenic	novelGene_6253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCATCCAATTAAATCAA	7852	False	NA	NA	False	NA	NA	NA	55475800	55476017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55475800_55476000
ES.7607.1	chr12	-	151	1	Intergenic	novelGene_6254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATTATTTAAACCAA	740	False	NA	NA	False	NA	NA	NA	55501438	55501287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55501300_55501400
ES.7608.1	chr12	+	1031	3	NNC	ENSMUSG00000112348.2	novel	1259	2	NA	NA	-1303	57958	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	55543202	55604694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55543363_55544565_55544736_55603993
ES.7608.2	chr12	+	796	1	Intergenic	novelGene_6255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAGAGA	NA	False	NA	NA	False	ATTAAA	-35	NA	55549131	55549927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55549100_55549900
ES.7608.3	chr12	+	1041	3	Intergenic	novelGene_6256	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	55554493	55604698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55554722_55577715_55577824_55603993
ES.7609.1	chr12	-	1966	5	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	49	1	intron_retention	FALSE	canonical	3	201	junction_4	14.0712472794703	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCCCGCTCGTTTGCT	NA	False	NA	-1	True	ATTAAA	-18	NA	55539383	55536193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ES.7609.11	chr12	-	1784	5	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	51	-3	intron_retention	FALSE	canonical	3	201	junction_4	21.095023109729	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCATTGTCCCGCTCGTT	NA	False	NA	-5	True	ATTAAA	-14	NA	55539381	55536197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55536755_55537190_55537452_55537555_55538116_55538454_55538564_55539084
ES.7609.12	chr12	-	1494	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	-335	419	-335	-419	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGGGTATACTTAGC	NA	False	NA	NA	False	NA	NA	NA	55539767	55536613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ES.7609.13	chr12	-	1803	4	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	52	-419	intron_retention	FALSE	canonical	3	201	junction_3	14.8174071805952	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGGGTATACTTAGC	NA	False	NA	NA	False	NA	NA	NA	55539380	55536613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55537452_55537555_55538116_55538454_55538564_55539084
ES.7609.14	chr12	-	1887	4	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	52	-420	intron_retention	FALSE	canonical	3	223	junction_3	14.8174071805952	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAGGGTATACTTAG	NA	False	NA	NA	False	AATAGA	-45	NA	55539380	55536614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55536755_55537190_55537452_55537555_55538116_55538454
ES.7609.15	chr12	-	2763	1	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	52	-423	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAGAAAGGGTATACT	NA	False	NA	NA	False	AATAGA	-42	NA	55539380	55536617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55536600_55539400
ES.7609.2	chr12	-	8331	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	-6753	0	-6753	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55546185	55536194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ES.7609.3	chr12	-	3603	7	NNC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	-3387	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.1595741761891	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGTCCCGCTCGTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	55542819	55536195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084_55541308_55542668
ES.7609.4	chr12	-	2066	4	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	51	-1	intron_retention	FALSE	canonical	3	201	junction_3	9.28559218478941	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGTCCCGCTCGTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	55539381	55536195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55537645_55537904_55538116_55538454_55538564_55539084
ES.7609.6	chr12	-	2664	2	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	52	-1	intron_retention	FALSE	canonical	3	201	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGTCCCGCTCGTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	55539380	55536195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55538564_55539084
ES.7609.8	chr12	-	2195	7	NNC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	-3299	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.1595741761891	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGTCCCGCTCGTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	55542731	55536195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084_55539988_55542668
ES.7609.9	chr12	-	3597	7	NNC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	-9593	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	86.1595741761891	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTGTCCCGCTCGTTTG	NA	False	NA	-3	True	ATTAAA	-16	NA	55549025	55536195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084_55541308_55548880
ES.761.1	chr1	+	2281	9	FSM	ENSMUSG00000026170.7	ENSMUST00000027356.7	1892	9	-390	1	-390	-1	multi-exon	TRUE	canonical	1	2	junction_5	1.98431348329844	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGGGGGGGTCTTTG	NA	False	NA	NA	False	AATAAA	-13	NA	74752342	74777050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74774911_74775022_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
ES.761.2	chr1	+	2372	7	NIC	ENSMUSG00000026170.7	novel	1892	9	NA	NA	-290	-2	intron_retention	FALSE	canonical	1	2	junction_4	2.11476292340825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTGGGGGGGTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	74752442	74777049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74775196_74775839_74776007_74776175_74776551_74776701
ES.761.3	chr1	+	1871	7	NIC	ENSMUSG00000026170.7	novel	1892	9	NA	NA	-60	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.82842712474619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTGGGGGGGTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	74752672	74777049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74753051_74774435_74774636_74774712_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
ES.761.4	chr1	+	2061	8	NIC	ENSMUSG00000026170.7	novel	1892	9	NA	NA	-59	-2	intron_retention	FALSE	canonical	1	2	junction_4	2.0995626366713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTGGGGGGGTCTTT	NA	False	NA	NA	False	AATAAA	-12	NA	74752673	74777049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
ES.761.5	chr1	+	1544	3	NIC	ENSMUSG00000026170.7	novel	1892	9	NA	NA	201	-2	intron_retention	FALSE	canonical	2	2	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTGGGGGGGTCTTT	2695	False	NA	NA	False	AATAAA	-12	NA	74774710	74777049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74775196_74775839_74776551_74776701
ES.761.6	chr1	+	1989	2	NIC	ENSMUSG00000026170.7	novel	784	3	NA	NA	381	-21	intron_retention	FALSE	canonical	3	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATTTAAAATTCA	2875	False	NA	NA	False	NA	NA	NA	74774890	74777030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74776551_74776701
ES.7610.1	chr12	-	3117	1	Intergenic	novelGene_6257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTGTCTATGTCGTT	NA	False	NA	NA	False	NA	NA	NA	55601765	55598648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55598600_55601800
ES.7611.1	chr12	+	4155	1	Intergenic	novelGene_6259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAAAGCAATCATCCAT	NA	False	NA	NA	False	NA	NA	NA	55679471	55683626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55679500_55683600
ES.7612.1	chr12	+	3136	6	Antisense	novelGene_ENSMUSG00000021027.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTACCGTGCAGGACC	NA	False	NA	NA	False	AATAAA	-1	NA	55724011	55744614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_55724051_55730691_55730791_55731271_55731407_55736543_55736615_55740141_55740251_55741931
ES.7612.2	chr12	+	4145	6	Antisense	novelGene_ENSMUSG00000021027.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55724011	55744582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_55724051_55730691_55730869_55731265_55731407_55736543_55736615_55740141_55740251_55740974
ES.7612.3	chr12	+	4895	5	Antisense	novelGene_ENSMUSG00000021027.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACTGACTTACCGTG	NA	False	NA	NA	False	NA	NA	NA	55724011	55744607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_55724051_55730691_55730869_55731264_55731407_55736543_55736615_55740141
ES.7612.5	chr12	+	3213	6	Antisense	novelGene_ENSMUSG00000021027.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACTGACTTACCGTG	NA	False	NA	NA	False	NA	NA	NA	55724011	55744607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_55724051_55730691_55730869_55731265_55731407_55736543_55736615_55740141_55740251_55741931
ES.7613.1	chr12	+	4123	1	Antisense	novelGene_ENSMUSG00000021027.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACACTACCTTAGGATAA	NA	False	NA	NA	False	NA	NA	NA	55806964	55811087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_55807000_55811100
ES.7614.1	chr12	+	178	1	Intergenic	novelGene_6260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	55820197	55820375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55820200_55820400
ES.7615.1	chr12	+	179	1	Intergenic	novelGene_6261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTTTTTTTCACTT	4954	False	NA	NA	False	NA	NA	NA	55841340	55841519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_55841300_55841500
ES.7616.1	chr12	-	176	2	Antisense	novelGene_ENSMUSG00000045440.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	320	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	55663959	55609801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_55609928_55663909
ES.7616.10	chr12	-	7805	41	NNC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_40	26.0240153512097	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCCATGATCGTA	NA	False	NA	-11	True	AATAAA	-24	NA	55867861	55649684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842553_55867441
ES.7616.11	chr12	-	7880	40	NNC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	22	-1	intron_retention	FALSE	canonical	0	0	junction_1	29.1361491514703	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCCATGATCGTA	9969	False	NA	-11	True	AATAAA	-24	NA	55867930	55649684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651083_55659418_55659544_55687368_55687497_55689109_55689269_55705828_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.13	chr12	-	7921	40	NNC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	-53	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	25.2178151026925	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCCATGATCGTA	9894	False	NA	-11	True	AATAAA	-24	NA	55868005	55649684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742051_55745529_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.14	chr12	-	9176	41	NIC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	6	-1	intron_retention	FALSE	canonical	1	5	junction_24	25.8121943081172	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCCATGATCGTA	NA	False	NA	-11	True	AATAAA	-24	NA	55867860	55649684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55768190_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.18	chr12	-	7775	42	NNC	ENSMUSG00000021027.18	novel	6631	42	NA	NA	-126	-3	intron_retention	FALSE	canonical	1	1	junction_3	29.8479390344526	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCCTGTCCATGATCG	NA	False	NA	-13	True	AATAAA	-22	NA	55867678	55649686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651054_55658857_55658889_55659418_55659554_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55781818_55781960_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.19	chr12	-	6988	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	4	909	4	52	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTGGTTATTTATTG	9951	False	NA	NA	False	AATATA	-12	NA	55867948	55650592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.2	chr12	-	7960	42	FSM	ENSMUSG00000021027.18	ENSMUST00000219432.2	6631	42	22	-1351	6	7	multi-exon	FALSE	canonical	1	7	junction_25	27.7917170392634	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCGTATTCTATTGTGT	NA	False	NA	0	True	AATAAA	-35	NA	55867860	55649673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55781818_55781960_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.20	chr12	-	236	1	Intergenic	novelGene_6258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAAAGAAAGGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	55663960	55663724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55663700_55664000
ES.7616.21	chr12	-	6589	37	NIC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	-4	17045	intron_retention	FALSE	canonical	0	0	junction_21	26.7255715156759	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCAGTGTAACGAGAGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	55867870	55686904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.22	chr12	-	4035	12	NNC	ENSMUSG00000021027.18	novel	8841	40	NA	NA	787	16560	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.0573968365683	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCATTGTATCAAAATT	NA	False	NA	NA	False	AATAAA	-25	NA	55743897	55687389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55687497_55689109_55689269_55705832_55705989_55708090_55708181_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931
ES.7616.23	chr12	-	6351	38	ISM	ENSMUSG00000021027.18	ENSMUST00000110687.8	7874	41	-2	37681	-2	16555	5prime_fragment	FALSE	canonical	1	23	junction_19	22.64832612813	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGATTCCATTGTATCA	9945	False	NA	NA	False	AATAAA	-20	NA	55867954	55687394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.24	chr12	-	4317	21	FSM	ENSMUSG00000021027.18	ENSMUST00000219529.2	3581	21	48	-784	48	784	multi-exon	FALSE	canonical	1	23	junction_2	17.649645888799	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTCCATTCCCCCAGC	NA	False	NA	NA	False	NA	NA	NA	55867818	55758470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.25	chr12	-	4239	21	FSM	ENSMUSG00000021027.18	ENSMUST00000219529.2	3581	21	-95	-563	-9	563	multi-exon	FALSE	canonical	1	23	junction_2	17.649645888799	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGTCTAGGTCATAG	9938	False	NA	NA	False	AATAAA	-18	NA	55867961	55758691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.26	chr12	-	3678	21	FSM	ENSMUSG00000021027.18	ENSMUST00000219529.2	3581	21	-95	-2	-9	2	multi-exon	FALSE	canonical	1	23	junction_2	17.649645888799	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTTTCTTATTTTT	9938	False	NA	NA	False	ATTAAA	-14	NA	55867961	55759252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.27	chr12	-	5359	17	ISM	ENSMUSG00000021027.18	ENSMUST00000219432.2	6631	42	-70	128239	0	-10300	5prime_fragment	FALSE	canonical	3	8	junction_1	22.1726182486417	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAGTCATCTTCTGTC	9947	False	NA	NA	False	AGTAAA	-14	NA	55867952	55779263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55781960_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.28	chr12	-	2070	13	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	-11	25011	-11	-25011	5prime_fragment	FALSE	canonical	3	70	junction_3	9.94009836749896	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATATGTGTAAACGCAT	9936	False	NA	NA	False	AATAAA	-20	NA	55867963	55793974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.29	chr12	-	3840	11	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	-32	38402	-32	-38402	5prime_fragment	FALSE	canonical	3	70	junction_1	10.6212052046837	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACATGATAAAAT	9915	False	NA	NA	False	ATTAAA	-20	NA	55867984	55807365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.3	chr12	-	7742	40	NIC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	0	6	intron_retention	FALSE	canonical	0	0	junction_24	26.5165647309037	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCGTATTCTATTGTG	9947	False	NA	-1	True	AATAAA	-34	NA	55867952	55649674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.30	chr12	-	1894	6	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	33702	47471	33302	-47471	internal_fragment	FALSE	canonical	3	76	junction_3	7.29383301152419	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATGACATTTTCATA	NA	False	NA	NA	False	NA	NA	NA	55834250	55816434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207
ES.7616.31	chr12	-	3007	3	ISM	ENSMUSG00000021027.18	ENSMUST00000219542.2	3426	17	-10	70486	-10	-70486	5prime_fragment	FALSE	canonical	3	103	junction_2	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGCCAGCTGGGCATTG	9937	False	NA	NA	False	NA	NA	NA	55867962	55839449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_55841830_55842450_55842562_55867446
ES.7616.32	chr12	-	2565	1	Intergenic	novelGene_6262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCTTGTCTGGTCTGGT	NA	False	NA	NA	False	ACTAAA	-38	NA	55866025	55863460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55863500_55866000
ES.7616.33	chr12	-	2882	1	FSM	ENSMUSG00002076190.1	ENSMUST00020183529.1	91	1	-45	-2746	-45	2746	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAGTGGGAGAAAGA	9916	False	NA	NA	False	AAGAAA	-9	NA	55867983	55865101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55865100_55868000
ES.7616.4	chr12	-	4141	1	Genic_Genomic	ENSMUSG00000021027.18	novel	NA	NA	NA	NA	5607	6	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCGTATTCTATTGTG	NA	False	NA	-1	True	AATAAA	-34	NA	55653815	55649674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_55649700_55653800
ES.7616.5	chr12	-	7941	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	-31	-9	-31	6	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCGTATTCTATTGTG	9916	False	NA	-1	True	AATAAA	-34	NA	55867983	55649674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ES.7616.7	chr12	-	5481	26	NNC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	-24450	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	33.5395646960422	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGATCGTATTCTATTG	NA	False	NA	-3	True	AATAAA	-32	NA	55769134	55649676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55768190_55768273_55768812
ES.7616.9	chr12	-	7449	38	NNC	ENSMUSG00000021027.18	novel	7901	41	NA	NA	33118	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.2136534116115	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCCATGATCGTAT	NA	False	NA	-10	True	AATAAA	-25	NA	55834434	55649683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55708090_55708181_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207
ES.7617.1	chr12	+	2606	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	2	1	2	-1	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55883110	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ES.7617.12	chr12	+	5252	9	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	5	-6	intron_retention	FALSE	canonical	3	160	junction_2	20.3776838723148	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATTTGTAGTGTTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	55883193	55916515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55883431_55888355_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ES.7617.13	chr12	+	1715	10	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	2390	-6	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	61.1973129402845	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATTTGTAGTGTTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	55888044	55916515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946_55915306_55916182
ES.7617.14	chr12	+	2070	7	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	8957	1	1089	-1	3prime_fragment	FALSE	canonical	3	165	junction_3	19.0940653956493	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55892065	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ES.7617.15	chr12	+	5100	5	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	22733	6	14865	-6	intron_retention	FALSE	canonical	3	165	junction_2	22.9128784747792	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCATTTGTAGTGTTGTG	NA	False	NA	-4	True	AATAAA	-14	NA	55905841	55916515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735
ES.7617.17	chr12	+	2043	4	ISM	ENSMUSG00000012076.9	ENSMUST00000219419.2	1516	9	24492	1	16703	-1	intron_retention	FALSE	canonical	0	0	junction_2	84.0119039184329	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55907679	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55907957_55908174_55908240_55912735_55912863_55914946
ES.7617.18	chr12	+	1741	3	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	26808	3	18940	-3	3prime_fragment	FALSE	canonical	3	189	junction_2	19	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTAGTGTTGTGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	55909916	55916518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55909959_55912735_55912863_55914946
ES.7617.2	chr12	+	1630	12	NNC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_11	73.4331652052812	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55883118	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946_55915191_55915281_55915306_55916182
ES.7617.3	chr12	+	4670	9	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	22	1	22	-1	intron_retention	FALSE	canonical	3	160	junction_3	21.242645786248	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55883130	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735
ES.7617.4	chr12	+	1133	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	28	1448	-18	-1448	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCCCCACATCTACC	NA	False	NA	NA	False	ATTAAA	-19	NA	55883136	55915073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ES.7617.5	chr12	+	3768	10	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	1	-1	intron_retention	FALSE	canonical	2	3	junction_9	61.7899668231016	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55883155	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55915306_55916182
ES.7617.6	chr12	+	4547	8	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_4	68.1130512831575	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTAGTGTTGTGTGTT	NA	False	NA	0	True	AATAAA	-18	NA	55883155	55916519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55907872_55907957_55908174_55908240_55909918_55909959_55912735
ES.7617.7	chr12	+	2448	9	NIC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	10	-8	intron_retention	FALSE	canonical	0	0	junction_4	64.5111424484174	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTCATTTGTAGTGTTG	NA	False	NA	-6	True	AATAAA	-12	NA	55883164	55916513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ES.7617.8	chr12	+	2443	8	NNC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	11	-1	intron_retention	FALSE	non_canonical	0	0	junction_6	67.3274059491136	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTAGTGTTGTGTGTTA	NA	False	NA	1	True	AATAAA	-19	NA	55883165	55916520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907954_55912735_55912863_55914946
ES.7617.9	chr12	+	3179	9	NNC	ENSMUSG00000012076.9	novel	2609	10	NA	NA	12	-1455	intron_retention	FALSE	non_canonical	0	0	junction_6	66.4754418939807	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTCTAAGTGTTCCCCAC	NA	False	NA	NA	False	ATTAAA	-12	NA	55883166	55915066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907956_55908174_55908240_55909918_55909959_55912735
ES.7618.1	chr12	-	3756	1	Intergenic	novelGene_6263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACCAGGGCTAACTAG	NA	False	NA	NA	False	NA	NA	NA	55898242	55894486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55894500_55898200
ES.7619.1	chr12	-	2318	1	Intergenic	novelGene_6264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	55963961	55961643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_55961600_55964000
ES.762.1	chr1	-	217	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGATGAAAGGGAACCAAG	NA	False	NA	NA	False	NA	NA	NA	74690586	74690369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74690400_74690600
ES.762.2	chr1	-	198	2	Antisense	novelGene_ENSMUSG00000026170.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	74756768	74690409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74690517_74756677
ES.762.3	chr1	-	1998	3	Antisense	novelGene_ENSMUSG00000033257.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCCGAGGCAAGCGCGC	NA	False	NA	NA	False	NA	NA	NA	74719692	74700853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74701047_74712000_74712170_74718056
ES.762.4	chr1	-	213	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACACATGTCATGTG	NA	False	NA	NA	False	NA	NA	NA	74732258	74732045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74732000_74732300
ES.762.5	chr1	-	167	2	Antisense	novelGene_ENSMUSG00000026170.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	74756770	74734024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_74734032_74756610
ES.762.6	chr1	-	178	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATATGTAAATTT	NA	False	NA	NA	False	NA	NA	NA	74756780	74756602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74756600_74756800
ES.7620.1	chr12	-	6179	1	Intergenic	novelGene_6265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTGGTTGATATGGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	56145407	56139228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_56139200_56145400
ES.7620.2	chr12	-	4775	1	Intergenic	novelGene_6266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGAACAAGCGGCAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	56145613	56140838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_56140800_56145600
ES.7621.10	chr12	-	1714	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	5	-42	intron_retention	FALSE	canonical	3	215	junction_1	41.3481978977047	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392615	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.11	chr12	-	1764	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-5	-42	intron_retention	FALSE	canonical	3	15	junction_7	103.01020357623	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392611	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384615_56386985_56387083_56387169_56387389_56389020_56389195_56392456
ES.7621.12	chr12	-	1514	9	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	21	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.234116459827	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392658	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_56375585_56377013_56377118_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.14	chr12	-	1524	10	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-13	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.608813143414	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392633	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_56375585_56377013_56377053_56380346_56380447_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.15	chr12	-	4185	6	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-4	-42	intron_retention	FALSE	canonical	1	1	junction_3	138.252811906304	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392610	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_56375582_56377013_56377053_56382582_56382702_56384087_56387389_56389020_56389141_56392456
ES.7621.16	chr12	-	1253	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	5	-42	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	108.866891202055	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392615	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.17	chr12	-	8324	1	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	9153	-42	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56383453	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375100_56383500
ES.7621.18	chr12	-	1454	9	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-3	-42	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	97.3735558301123	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392609	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389195_56392456
ES.7621.19	chr12	-	5488	6	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	-5	-42	intron_retention	FALSE	canonical	3	215	junction_1	44.521455501814	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAACAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	56392611	56375129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.2	chr12	-	1490	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	14	8	14	-8	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTTTCATGTCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	56392665	56375095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.21	chr12	-	2994	3	FSM	ENSMUSG00000021028.9	ENSMUST00000218321.2	724	3	-1	-2269	-1	2269	multi-exon	FALSE	canonical	3	317	junction_1	16.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAACCTTGTACATCTG	NA	False	NA	NA	False	AATAAA	-21	NA	56392621	56384679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_56387389_56389020_56389141_56392456
ES.7621.3	chr12	-	4184	6	NNC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	8	-10	intron_retention	FALSE	canonical	3	94	junction_1	94.5718774266431	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAACTTTTTCATGTCT	NA	False	NA	NA	False	AATAAA	-23	NA	56392598	56375097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56387389_56389020_56389141_56392456
ES.7621.4	chr12	-	3128	7	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	16	-10	intron_retention	FALSE	canonical	3	215	junction_1	40.9213337460493	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAACTTTTTCATGTCT	NA	False	NA	NA	False	AATAAA	-23	NA	56392590	56375097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ES.7621.5	chr12	-	4291	6	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	28	-13	intron_retention	FALSE	canonical	3	15	junction_5	118.53877002905	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAAACTTTTTCATG	NA	False	NA	NA	False	AATAAA	-20	NA	56392651	56375100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56387389_56389020_56389195_56392456
ES.7621.6	chr12	-	3936	7	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	21	-13	intron_retention	FALSE	canonical	3	215	junction_1	44.0492149003059	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATAAACTTTTTCATG	NA	False	NA	NA	False	AATAAA	-20	NA	56392658	56375100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56387389_56389020_56389141_56392456
ES.7621.7	chr12	-	3949	2	ISM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	12193	21	12120	-21	3prime_fragment	FALSE	canonical	3	215	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGAATGTGTATAAACT	NA	False	NA	NA	False	AATAAA	-12	NA	56380486	56375108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_56375585_56377013
ES.7621.8	chr12	-	3781	8	NIC	ENSMUSG00000021028.9	novel	1512	9	NA	NA	4	-25	intron_retention	FALSE	canonical	3	215	junction_1	40.8356586870858	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAAATGAATGTGTATA	NA	False	NA	NA	False	AATAAA	-8	NA	56392602	56375112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56387083_56387169_56387389_56389020_56389141_56392456
ES.7622.1	chr12	+	2079	2	ISM	ENSMUSG00000001497.19	ENSMUST00000152848.2	2309	3	833	8895	833	-8895	5prime_fragment	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAACAAACAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	56743346	56748236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_56743986_56746796
ES.7622.2	chr12	+	3284	2	ISM	ENSMUSG00000001497.19	ENSMUST00000001538.10	4166	4	4398	4	4308	-4	3prime_fragment	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATCTTTACTGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	56746821	56759603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_56746940_56756437
ES.7623.1	chr12	+	3931	2	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	-3733	2291	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTTTGCTAATTA	NA	False	NA	21	True	ATTAAA	-25	NA	57273464	57288959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57273585_57285148
ES.7623.10	chr12	+	2089	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	13	-382	13	382	multi-exon	FALSE	canonical	3	317	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTCTGTAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	57277210	57287050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57285148
ES.7623.11	chr12	+	3994	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	17	-2291	17	2291	multi-exon	FALSE	canonical	3	317	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTGTTTGCTAATTA	NA	False	NA	21	True	ATTAAA	-25	NA	57277214	57288959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57285148
ES.7623.12	chr12	+	2144	12	NIC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	-1	27	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	27.0423604036028	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGGTCGAATGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	57277218	57513854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57507627_57507771_57513241
ES.7623.13	chr12	+	1400	8	ISM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	-11	92658	1	-2019	5prime_fragment	FALSE	canonical	3	52	junction_6	11.4196393666922	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAACATGTAATATAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	57277220	57411360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912
ES.7623.14	chr12	+	1079	5	FSM	ENSMUSG00000047022.19	ENSMUST00000148418.8	1168	5	1	88	1	-88	multi-exon	FALSE	canonical	3	68	junction_4	7.69740215917033	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTCCTTAATCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	57277222	57372773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309
ES.7623.15	chr12	+	3413	8	ISM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	-6	90640	4	-1	5prime_fragment	FALSE	canonical	3	52	junction_6	11.4196393666922	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATATGTAATGCTGACT	NA	False	NA	NA	False	AATAAA	-20	NA	57277225	57413378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912
ES.7623.16	chr12	+	2568	8	ISM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	-4	91483	-4	-844	5prime_fragment	FALSE	canonical	3	52	junction_6	11.4196393666922	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTGTATTATTATT	NA	False	NA	NA	False	AATAAA	-13	NA	57277227	57412535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912
ES.7623.17	chr12	+	1987	11	NIC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	1	27	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	19.5642531163344	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGGTCGAATGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	57277232	57513854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57513241
ES.7623.18	chr12	+	2227	12	NNC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.351094195294	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTTGGTATTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	57277241	57543982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57296614_57296738_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ES.7623.19	chr12	+	3340	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	45	-1665	45	1665	multi-exon	FALSE	canonical	3	317	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTGTGTGTTTTGT	NA	False	NA	NA	False	TTTAAA	-22	NA	57277242	57288333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57285148
ES.7623.2	chr12	+	4168	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	-18	-2430	-18	2430	multi-exon	FALSE	canonical	3	317	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTGAATATATTTTTC	NA	False	NA	NA	False	AGTAAA	-35	NA	57277179	57289098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57285148
ES.7623.20	chr12	+	2428	8	NIC	ENSMUSG00000047022.19	novel	1424	10	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	26.0219687407171	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTATATTGGTATCCT	NA	False	NA	NA	False	AATAAA	-18	NA	57277242	57401003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57399505
ES.7623.21	chr12	+	1382	10	FSM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	40	2	-5	-2	multi-exon	FALSE	canonical	3	42	junction_9	13.9602610609146	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57277271	57504016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ES.7623.22	chr12	+	1844	10	NIC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	16	-5	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	19.7652894404981	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTGTTGGTATTTT	NA	False	NA	NA	False	AATAAA	-26	NA	57277292	57543980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_57277398_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ES.7623.23	chr12	+	3690	4	NNC	ENSMUSG00000047022.19	novel	1856	4	NA	NA	26	659	intron_retention	FALSE	canonical	0	0	junction_1	41.0121933088198	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	57277302	57356140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57344394_57344439_57350130_57350338_57352796
ES.7623.25	chr12	+	1464	11	NNC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	36	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.5317997958724	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57277312	57504016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57296614_57296738_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ES.7623.26	chr12	+	1680	9	NNC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	70	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.0609949911603	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTGTTGGTATTTT	NA	False	NA	NA	False	AATAAA	-26	NA	57277346	57543980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57296614_57296738_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ES.7623.27	chr12	+	2035	2	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	206	389	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTAAAGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	57277403	57287057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277530_57285148
ES.7623.28	chr12	+	1464	10	Fusion	ENSMUSG00000079104.5_ENSMUSG00000047022.19	novel	283	3	NA	NA	7942	32	multi-exon	FALSE	canonical	0	0	junction_1	23.6173194452245	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTTGGGAAACCCAAC	NA	False	NA	NA	False	NA	NA	NA	57285218	57504050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_57285393_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ES.7623.29	chr12	+	1895	1	Intergenic	novelGene_6268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAACAGAAAACCCCAAA	NA	False	NA	NA	False	NA	NA	NA	57323721	57325616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_57323700_57325600
ES.7623.3	chr12	+	2156	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	-42	3	-23	-3	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTTGGTATTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	57277189	57543982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ES.7623.30	chr12	+	4485	1	Intergenic	novelGene_6269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAACAAGTTTGTTTC	NA	False	NA	NA	False	AATAAA	-8	NA	57427534	57432019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_57427500_57432000
ES.7623.5	chr12	+	3604	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	3	-1887	3	1887	multi-exon	FALSE	canonical	3	317	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTTTCTGATAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	57277200	57288555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57285148
ES.7623.6	chr12	+	4012	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	5	34984	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	158.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTATAGGTTGACCTCTT	NA	False	NA	NA	False	NA	NA	NA	57277202	57321652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57285148_57288946_57321632
ES.7623.7	chr12	+	2200	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	10	382	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATTCTGTAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	57277207	57287050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57281366_57281475_57285148
ES.7623.8	chr12	+	4099	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	13	2284	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTCTATGTTTTGTTTG	NA	False	NA	14	True	ATTAAA	-18	NA	57277210	57288952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_57277398_57281366_57281475_57285148
ES.7623.9	chr12	+	1654	4	FSM	ENSMUSG00000047022.19	ENSMUST00000153755.8	1856	4	-2	204	-2	-204	multi-exon	FALSE	canonical	3	69	junction_1	7.34846922834953	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAACTTGTCTTTTAG	NA	False	NA	NA	False	AATAAA	-23	NA	57277210	57355277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144
ES.7624.1	chr12	-	1448	1	Intergenic	novelGene_6267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGGGCACACCTTTAATC	NA	False	NA	NA	False	NA	NA	NA	57276091	57274643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_57274600_57276100
ES.7625.1	chr12	-	6583	1	Antisense	novelGene_ENSMUSG00000079104.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAACTCATTTAAAACTA	NA	False	NA	NA	False	AATATA	-21	NA	57289720	57283137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_57283100_57289700
ES.7626.1	chr12	-	3248	2	FSM	ENSMUSG00000035451.8	ENSMUST00000044380.8	3191	2	89	-146	89	146	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTGAATGTGTAACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	57592818	57587267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_57590147_57592449
ES.7626.2	chr12	-	3017	3	NNC	ENSMUSG00000035451.8	novel	3191	2	NA	NA	-100	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAATTTCTGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	57593007	57587419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_57590147_57592449_57592712_57592979
ES.7627.1	chr12	-	1417	1	FSM	ENSMUSG00000045930.4	ENSMUST00000062254.4	4571	1	3154	0	3154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTGTTGTTTGAACT	NA	False	NA	NA	False	AATAAA	-20	NA	58312922	58311505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_58311500_58312900
ES.7628.1	chr12	-	157	1	Intergenic	novelGene_6270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58869460	58869303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_58869300_58869500
ES.7629.1	chr12	-	193	1	Intergenic	novelGene_6271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTACATGATTAAACA	NA	False	NA	NA	False	NA	NA	NA	58983851	58983658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_58983700_58983900
ES.763.1	chr1	-	178	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	74763630	74763452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74763500_74763600
ES.7630.1	chr12	+	177	1	Intergenic	novelGene_6272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCAACACACTGG	NA	False	NA	NA	False	NA	NA	NA	58990924	58991101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_58990900_58991100
ES.7631.1	chr12	+	165	1	Intergenic	novelGene_6273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	8628	False	NA	NA	False	NA	NA	NA	59022064	59022229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59022100_59022200
ES.7631.2	chr12	+	1078	1	Intergenic	novelGene_6274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8629	False	NA	NA	False	NA	NA	NA	59022065	59023143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59022100_59023100
ES.7632.1	chr12	+	180	1	Intergenic	novelGene_6276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAATTAGGAT	NA	False	NA	NA	False	NA	NA	NA	59030535	59030715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59030500_59030700
ES.7633.1	chr12	-	4149	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	-40	0	40	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTTGGTGCCTGCTAT	2678	False	NA	13	True	NA	NA	NA	59058803	59005128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.10	chr12	-	3821	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	-65	353	-65	-353	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCTTTTTTTGTTTTTT	2613	False	NA	-6	True	AGTAAA	-27	NA	59058868	59005521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.11	chr12	-	3632	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	64	-356	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	151.441860524472	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGCTTTTTTTGTTT	2742	False	NA	-9	True	AGTAAA	-24	NA	59058739	59005524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053832_59054022_59058631
ES.7633.12	chr12	-	3803	21	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	36	-360	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_16	198.419473590674	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGAGTGCTTTTTTT	2714	False	NA	-13	True	AGTAAA	-20	NA	59058767	59005528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048095_59048186_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.14	chr12	-	3583	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	7	-360	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	152.846328055338	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGAGTGCTTTTTTT	2685	False	NA	-13	True	AGTAAA	-20	NA	59058796	59005528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025350_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.15	chr12	-	3773	21	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	118	-363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	226.759228037141	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAATAAGAGTGCTTTT	2796	False	NA	-16	True	AGTAAA	-17	NA	59058685	59005531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59026905_59027055_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054018_59058631
ES.7633.19	chr12	-	3588	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	12	-402	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	154.356059841771	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTATTTTAAAATCTAGT	2690	False	NA	-5	True	AATAAA	-22	NA	59058791	59005570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.2	chr12	-	4072	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	37	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	150.801441611955	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGCTGAAGAACACTG	2715	False	NA	-21	True	NA	NA	NA	59058766	59005162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013771_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.20	chr12	-	3552	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	95	-406	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	151.001531793151	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2773	False	NA	-9	True	AATAAA	-18	NA	59058708	59005574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025346_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.21	chr12	-	3507	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	37	-406	combination_of_known_splicesites	FALSE	canonical	1	3	junction_12	154.907100794454	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2715	False	NA	-9	True	AATAAA	-18	NA	59058766	59005574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.22	chr12	-	3678	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	0	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	152.813394432574	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAGTTATTTTAAAA	2678	False	NA	-11	True	AATAAA	-16	NA	59058803	59005576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029450_59031929_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.23	chr12	-	3439	18	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	117	-408	combination_of_known_splicesites	FALSE	canonical	1	11	junction_16	156.113103351584	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAGTTATTTTAAAA	2795	False	NA	-11	True	AATAAA	-16	NA	59058686	59005576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59053775_59054022_59058631
ES.7633.24	chr12	-	3479	18	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	8	-408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	158.563207136585	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAGTTATTTTAAAA	2686	False	NA	-11	True	AATAAA	-16	NA	59058795	59005576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048830_59053832_59054022_59058631
ES.7633.26	chr12	-	3680	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	0	-408	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	258.674160537229	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAGTTATTTTAAAA	2678	False	NA	-11	True	AATAAA	-16	NA	59058803	59005576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048095_59048186_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054018_59058631
ES.7633.28	chr12	-	3675	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	0	-408	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	149.550165755717	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTAGTTATTTTAAAA	2678	False	NA	-11	True	AATAAA	-16	NA	59058803	59005576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045070_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.3	chr12	-	4011	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	149.550165755717	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2750	False	NA	-27	True	NA	NA	NA	59058731	59005168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045070_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.31	chr12	-	3448	18	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	11	-410	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	161.168720294554	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTTAGTTATTTTAA	2689	False	NA	-13	True	AATAAA	-14	NA	59058792	59005578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.32	chr12	-	3638	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	11	-410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	196.595243458972	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTTAGTTATTTTAA	2689	False	NA	-13	True	AATAAA	-14	NA	59058792	59005578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036214_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054018_59058631
ES.7633.34	chr12	-	3487	18	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	13	-412	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	207.327549550869	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTCTTAGTTATTTT	2691	False	NA	-15	True	AATAAA	-12	NA	59058790	59005580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025350_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59053775_59054022_59058631
ES.7633.35	chr12	-	3599	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	82	-417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	152.799617118924	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTGTTTTCTTAGTT	2760	False	NA	-20	True	AATAAA	-7	NA	59058721	59005585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025258_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.36	chr12	-	3696	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	-41	454	-41	-454	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTGTGCTAGGCCAAA	2637	False	NA	-16	True	AATAAA	-25	NA	59058844	59005622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.37	chr12	-	3524	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	118	-458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	151.443360411549	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGAACTGTGCTAGGC	2796	False	NA	-20	True	AATAAA	-21	NA	59058685	59005626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039061_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.38	chr12	-	3408	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	117	-460	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	155.797946071185	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGAACTGTGCTAG	2795	False	NA	-22	True	AATAAA	-19	NA	59058686	59005628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.39	chr12	-	6023	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	83	-460	intron_retention	FALSE	canonical	3	521	junction_9	54.819710116745	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGAACTGTGCTAG	2761	False	NA	-22	True	AATAAA	-19	NA	59058720	59005628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.40	chr12	-	3482	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	7	-461	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	152.846328055338	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATTGAACTGTGCTA	2685	False	NA	-23	True	AATAAA	-18	NA	59058796	59005629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025350_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.42	chr12	-	4090	10	NNC	ENSMUSG00000020986.14	novel	2529	18	NA	NA	-5340	-463	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	209.061630702764	625	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGAATTGAACTGTGC	5510	False	NA	-25	True	AATAAA	-16	NA	59034830	59005631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018030_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876
ES.7633.43	chr12	-	3603	21	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	111	-485	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_16	198.419473590674	626	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTACTTTGTTCTG	2789	False	NA	-47	True	NA	NA	NA	59058692	59005653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048095_59048186_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.45	chr12	-	3391	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	-3	721	-3	600	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTTCTGTTTGATTT	2675	False	NA	NA	False	AATATA	-21	NA	59058806	59005889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.47	chr12	-	3083	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	64	962	64	359	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCACATTACTAACTAGA	2742	False	NA	NA	False	AATAAA	-42	NA	59058739	59006130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.48	chr12	-	4033	3	NIC	ENSMUSG00000020986.14	novel	2529	18	NA	NA	-2345	352	intron_retention	FALSE	canonical	3	639	junction_1	6	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTATTAATGTGGG	NA	False	NA	NA	False	AATAAA	-3	NA	59020402	59013048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59013832_59015598_59018113_59019666
ES.7633.49	chr12	-	176	1	Intergenic	novelGene_6275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTAGCTACTT	NA	False	NA	NA	False	NA	NA	NA	59024639	59024463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59024500_59024600
ES.7633.6	chr12	-	3988	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	151.441860524472	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2742	False	NA	-27	True	NA	NA	NA	59058739	59005168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053832_59054022_59058631
ES.7633.7	chr12	-	3966	19	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	64	-1	combination_of_known_splicesites	FALSE	canonical	1	9	junction_5	155.052768795372	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTCAGCTATGCTGAAG	2742	False	NA	-28	True	NA	NA	NA	59058739	59005169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7633.9	chr12	-	3895	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	7	207	7	-207	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCCTACATTTTTT	2685	False	NA	NA	False	NA	NA	NA	59058796	59005375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ES.7634.1	chr12	+	1999	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-541	-2	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_9	268.690009095341	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTCATACAGATGAAATG	NA	False	NA	NA	False	AATAAA	-25	NA	59059637	59075183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074579
ES.7634.10	chr12	+	1419	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	30	139	30	-68	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTCTATGGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	59060208	59075117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.11	chr12	+	969	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-29	56	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	254.046624657758	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTCTGAAATGTCTGT	NA	False	NA	4	True	AATATA	-15	NA	59060210	59074729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.12	chr12	+	912	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-25	55	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_9	324.510571647691	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTCTGAAATGTCTG	NA	False	NA	3	True	AATATA	-14	NA	59060214	59074728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060345_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074579
ES.7634.13	chr12	+	1430	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_1	268.457781125662	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGATGAAATGGCAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	59060214	59075189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060345_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.15	chr12	+	1541	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-20	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	277.335781684349	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAGTTGAAGTTCATAC	NA	False	NA	NA	False	AATAAA	-15	NA	59060219	59075173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060477_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.16	chr12	+	2775	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-16	-2	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTTTAGTTTAATTTC	NA	False	NA	NA	False	TTTAAA	-4	NA	59060223	59075254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.18	chr12	+	2603	8	NNC	ENSMUSG00000060121.16	novel	1946	10	NA	NA	-9	56	intron_retention	FALSE	canonical	0	0	junction_2	278.48005827553	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTCTGAAATGTCTGT	NA	False	NA	4	True	AATATA	-15	NA	59060230	59074729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060841_59063651_59063746_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.19	chr12	+	1384	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-9	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	291.443390729658	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGATGAAATGGCAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	59060230	59075189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59060400_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.2	chr12	+	1597	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-11	2	-11	-2	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTTTTAGTTTAATTTC	NA	False	NA	NA	False	TTTAAA	-4	NA	59060167	59075254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.22	chr12	+	2241	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	2	65	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTCTGTGAAAAAGCC	NA	False	NA	13	True	AATATA	-24	NA	59060241	59074738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.23	chr12	+	1468	9	NNC	ENSMUSG00000060121.16	novel	1946	10	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	347.339081446358	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGATGAAATGGCAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	59060241	59075189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060477_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073622_59073700_59074522
ES.7634.25	chr12	+	1127	7	ISM	ENSMUSG00000060121.16	ENSMUST00000182188.8	1946	10	3712	-4	3712	4	3prime_fragment	FALSE	canonical	3	752	junction_3	40.2478432824529	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGATGAAATGGCAAAT	NA	False	NA	NA	False	AATAAA	-31	NA	59063951	59075189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.26	chr12	+	2347	3	FSM	ENSMUSG00000060121.16	ENSMUST00000182710.2	658	3	-1623	-66	-1623	66	multi-exon	FALSE	canonical	3	764	junction_2	15	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCTGTGAAAAAGCCC	2858	False	NA	14	True	AATATA	-25	NA	59069828	59074739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59071900_59073640_59073700_59074522
ES.7634.27	chr12	+	210	1	Intergenic	novelGene_6277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAATATTCTTAACAT	99	False	NA	NA	False	NA	NA	NA	59070353	59070563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59070400_59070600
ES.7634.3	chr12	+	1120	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-7	475	-7	108	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGTTTTCTCTTTTTT	NA	False	NA	56	True	AAAAAG	-26	NA	59060171	59074781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.4	chr12	+	1290	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	-1	299	-1	-228	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAAGTTTTCTTAAG	NA	False	NA	NA	False	NA	NA	NA	59060177	59074957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.5	chr12	+	1086	9	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-1	64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	346.948640831752	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGTCTGTGAAAAAGC	NA	False	NA	12	True	AATATA	-23	NA	59060177	59074737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060400_59060755_59060841_59063590_59063742_59063953_59064014_59064797_59064912_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.6	chr12	+	1015	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-1	66	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_9	268.690009095341	323	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCTGTGAAAAAGCCC	NA	False	NA	14	True	AATATA	-25	NA	59060177	59074739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074579
ES.7634.7	chr12	+	948	8	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	-1	56	combination_of_known_splicesites	FALSE	canonical	1	16	junction_5	299.633790089278	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTCTGAAATGTCTGT	NA	False	NA	4	True	AATATA	-15	NA	59060177	59074729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59071788_59071900_59073640_59073700_59074522
ES.7634.8	chr12	+	1952	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	8	-372	8	372	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCTTCATGGTTTTGCT	NA	False	NA	NA	False	AAAACA	-9	NA	59060186	59075628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ES.7634.9	chr12	+	2311	9	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	24	86	intron_retention	FALSE	non_canonical	0	0	junction_6	291.434276467268	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTATCTGATGAGCAA	NA	False	NA	34	True	AATATA	-45	NA	59060202	59074759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071778_59071900_59073640_59073700_59074522
ES.7635.1	chr12	-	4117	1	Antisense	novelGene_ENSMUSG00000060121.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGTTTCACACATCCT	2845	False	NA	NA	False	AATAAA	-45	NA	59068801	59064684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_59064700_59068800
ES.7636.1	chr12	+	173	1	Intergenic	novelGene_6278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAATACATAAATA	5113	False	NA	NA	False	NA	NA	NA	59077390	59077563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59077400_59077600
ES.7637.1	chr12	-	212	1	Intergenic	novelGene_6279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGATCTTCAAGAAGTCC	8373	False	NA	10	True	NA	NA	NA	59086201	59085989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59086000_59086200
ES.7638.1	chr12	+	4299	2	Antisense	novelGene_ENSMUSG00000020993.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATTGGATTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	59091250	59097610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_59094995_59097055
ES.7638.2	chr12	+	1659	1	Antisense	novelGene_ENSMUSG00000020993.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59091250	59092909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_59091200_59092900
ES.7638.3	chr12	+	174	1	Intergenic	novelGene_6280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATACTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	59094513	59094687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59094500_59094700
ES.7639.1	chr12	-	1689	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	10	-444	1	444	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACAGACTCTCGGTGTG	NA	False	NA	NA	False	AAAAAG	-40	NA	59108237	59089433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ES.7639.10	chr12	-	998	6	FSM	ENSMUSG00000020993.10	ENSMUST00000218799.2	737	6	-115	-146	2	-27	multi-exon	FALSE	canonical	2	5	junction_4	118.145672794225	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGCACCAATCAG	NA	False	NA	NA	False	NA	NA	NA	59108245	59090145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097185_59098426_59098495_59107941
ES.7639.11	chr12	-	889	5	FSM	ENSMUSG00000020993.10	ENSMUST00000218936.2	665	5	-19	-205	-4	205	multi-exon	FALSE	canonical	1	2	junction_1	126.52149026944	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAAGTAACAAATTTGA	NA	False	NA	NA	False	AATAAA	-11	NA	59108226	59093651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59093986_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ES.7639.12	chr12	-	186	1	Intergenic	novelGene_6281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	59105201	59105015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59105000_59105200
ES.7639.2	chr12	-	1412	7	FSM	ENSMUSG00000020993.10	ENSMUST00000217660.2	1486	7	74	0	20	0	multi-exon	FALSE	canonical	0	0	junction_5	143.962668772151	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAAGTTTATTTTAAT	NA	False	NA	-5	True	NA	NA	NA	59108184	59089913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59106041_59106298_59107941
ES.7639.4	chr12	-	1223	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	-9	41	2	-5	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACTTGAAAGTTTATT	NA	False	NA	-10	True	NA	NA	NA	59108256	59089918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ES.7639.5	chr12	-	5368	2	NIC	ENSMUSG00000020993.10	novel	665	5	NA	NA	1223	-5	intron_retention	FALSE	canonical	3	312	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACTTGAAAGTTTATT	NA	False	NA	-10	True	NA	NA	NA	59097347	59089918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59094993_59097053
ES.7639.6	chr12	-	1224	6	NNC	ENSMUSG00000020993.10	novel	1255	6	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	120.126599885288	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTACTTGAAAGTTTATT	NA	False	NA	-10	True	NA	NA	NA	59108224	59089918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098393_59098495_59107941
ES.7639.7	chr12	-	1296	7	NNC	ENSMUSG00000020993.10	novel	1486	7	NA	NA	-2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	143.492644023618	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATTACTTGAAAGTTT	NA	False	NA	-13	True	NA	NA	NA	59108224	59089921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59106189_59106298_59107941
ES.7639.8	chr12	-	1089	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	19	147	-6	19	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTATAATTTATTTC	NA	False	NA	NA	False	AAAAAG	-37	NA	59108228	59090024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ES.7639.9	chr12	-	984	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	23	248	-2	-7	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTTGTGTTCAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	59108224	59090125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ES.764.1	chr1	-	2895	10	NIC	ENSMUSG00000006542.14	novel	2832	14	NA	NA	588	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTACTGTCTTTTAA	NA	False	NA	NA	False	AAGAAA	-11	NA	74787148	74778083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_74779220_74779745_74779981_74780310_74780458_74780625_74780664_74783614_74783781_74783879_74784007_74784475_74784915_74785028_74785111_74786310_74786718_74787030
ES.7640.1	chr12	+	3623	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	-59	-79	-59	79	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTCTTGGATTAAGT	NA	False	NA	88	True	AAAAAG	-15	NA	59113610	59120863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.11	chr12	+	3470	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-11	-938	intron_retention	FALSE	canonical	3	465	junction_7	32.2066034552302	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCATCTTTTTTAACT	NA	False	NA	4	True	AATAAA	-15	NA	59113696	59119846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117084_59117164_59117304_59118211
ES.7640.13	chr12	+	2519	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	31	935	-7	-935	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCTTTTTTAACTACC	NA	False	NA	7	True	AATAAA	-18	NA	59113700	59119849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.14	chr12	+	3209	6	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	200.716117937748	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATCTTCATTTAGT	NA	False	NA	11	True	ATTAAA	-45	NA	59113703	59120786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113897_59115712_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.15	chr12	+	2471	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-2	-970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	178.456533573305	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113705	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116935_59117084_59117164_59117304_59118211
ES.7640.16	chr12	+	3415	6	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	0	-941	intron_retention	FALSE	canonical	3	465	junction_5	37.0102688452813	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTGTCATCTTTTTTA	NA	False	NA	1	True	AATAAA	-12	NA	59113707	59119843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.17	chr12	+	3383	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	2	-143	intron_retention	FALSE	canonical	3	465	junction_7	36.5775664492177	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTTTAAAATTAGTAC	NA	False	NA	10	True	AATAAA	-16	NA	59113709	59120641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117304_59118211
ES.7640.2	chr12	+	3462	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-10	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	176.454269925667	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATAAGTAAATGGTTTC	NA	False	NA	-20	True	ATTAAA	-14	NA	59113659	59120755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115691_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.20	chr12	+	3600	8	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	3	-797	intron_retention	FALSE	non_canonical	0	0	junction_1	186.4828054666	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTTGTTGACACTTG	NA	False	NA	24	True	AATAAA	-24	NA	59113710	59119987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114561_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117084_59117164_59117304_59118211
ES.7640.21	chr12	+	3314	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	41	130	3	-130	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTACTTGTATTAAAGTT	NA	False	NA	-19	True	AATAAA	-29	NA	59113710	59120654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.22	chr12	+	4401	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	4	8	intron_retention	FALSE	canonical	3	465	junction_7	32.2066034552302	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCATTTAGTTTTGTG	NA	False	NA	17	True	AGTAAA	-25	NA	59113711	59120792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117084_59117164_59117304_59118211
ES.7640.23	chr12	+	3299	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	6	-82	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.847371360951	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCTATTTTAACATTGT	NA	False	NA	29	True	ATTAAA	-32	NA	59113713	59120702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117028_59117168_59117304_59118211
ES.7640.24	chr12	+	3458	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	10	-98	intron_retention	FALSE	canonical	3	465	junction_7	36.8189170544331	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATTTAAATGACAGTG	NA	False	NA	13	True	ATTAAA	-16	NA	59113717	59120686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.25	chr12	+	2348	10	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-9	-972	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	168.304911425295	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAATGATAATAATAAA	NA	False	NA	-30	True	NA	NA	NA	59113719	59119812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211_59119187_59119301
ES.7640.26	chr12	+	4313	7	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	1	-143	intron_retention	FALSE	canonical	3	465	junction_6	33.1582903995701	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTTTAAAATTAGTAC	NA	False	NA	10	True	AATAAA	-16	NA	59113729	59120641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117304_59118211
ES.7640.27	chr12	+	3471	7	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-9	-970	intron_retention	FALSE	canonical	3	479	junction_5	30.347981810987	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113740	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115978_59116927_59117084_59117164
ES.7640.28	chr12	+	2371	10	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	11	-143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.304911425295	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGTTTAAAATTAGTAC	NA	False	NA	10	True	AATAAA	-16	NA	59113760	59120641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211_59118347_59119226
ES.7640.3	chr12	+	2518	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	-9	-970	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	177.847371360951	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113660	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117170_59117304_59118211
ES.7640.30	chr12	+	2980	5	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	13	-98	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.151136090196	504	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATTTAAATGACAGTG	NA	False	NA	13	True	ATTAAA	-16	NA	59113762	59120686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113897_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.31	chr12	+	2702	8	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	13	-805	intron_retention	FALSE	canonical	2	2	junction_3	184.481402193018	501	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGGGATGTCCTTGTT	NA	False	NA	16	True	AATAAA	-16	NA	59113762	59119979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115136_59115511_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.32	chr12	+	3453	7	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	13	-970	intron_retention	FALSE	canonical	3	465	junction_6	33.1582903995701	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113762	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117304_59118211
ES.7640.33	chr12	+	2311	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	14	-1040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	176.454269925667	498	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTTGTACTTTTTGCA	NA	False	NA	-98	True	AATACA	-18	NA	59113763	59119744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115941_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.34	chr12	+	3127	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	94	264	14	-264	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAGATAACACACAAGT	NA	False	NA	NA	False	AATGAA	-27	NA	59113763	59120520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.36	chr12	+	2535	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	19	-970	intron_retention	FALSE	canonical	3	465	junction_7	36.8189170544331	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113768	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.37	chr12	+	2339	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	106	1040	26	-1040	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTTGTACTTTTTGCA	NA	False	NA	-98	True	AATACA	-18	NA	59113775	59119744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.38	chr12	+	2896	7	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	30	-970	intron_retention	FALSE	canonical	3	465	junction_6	38.3695481107378	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGATAATAATAAAAA	NA	False	NA	-28	True	NA	NA	NA	59113779	59119814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59113902_59114564_59114637_59115070_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.39	chr12	+	3636	6	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	1093	-145	intron_retention	FALSE	canonical	3	465	junction_5	30.3051150798013	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACTGTTTAAAATTAGT	NA	False	NA	8	True	AATAAA	-14	NA	59114842	59120639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.5	chr12	+	2739	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	-4	750	-4	-750	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTGTCACAAGATACT	NA	False	NA	19	True	AATAAA	-19	NA	59113665	59120034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7640.6	chr12	+	3462	8	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	-4	935	-4	-935	intron_retention	FALSE	canonical	3	479	junction_6	28.1751084238176	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCTTTTTTAACTACC	NA	False	NA	7	True	AATAAA	-18	NA	59113665	59119849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164
ES.7640.7	chr12	+	3349	9	NNC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	3	-142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	177.847371360951	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTTTAAAATTAGTACT	NA	False	NA	11	True	AATAAA	-17	NA	59113672	59120642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117093_59117164_59117304_59118211
ES.7640.9	chr12	+	2913	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	21	551	-17	-551	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTACGATTTGGTTGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	59113690	59120233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ES.7641.1	chr12	+	186	1	FSM	ENSMUSG00000066487.4	ENSMUST00000085368.4	882	1	738	-42	738	42	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	59128542	59128728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59128500_59128700
ES.7642.1	chr12	-	177	1	Intergenic	novelGene_6282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAGGA	567	False	NA	NA	False	NA	NA	NA	59130719	59130542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59130500_59130700
ES.7643.1	chr12	-	181	1	Intergenic	novelGene_6283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	59145942	59145761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59145800_59145900
ES.7644.1	chr12	-	220	1	Intergenic	novelGene_6284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAAACTAAAA	NA	False	NA	NA	False	NA	NA	NA	59147573	59147353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59147400_59147600
ES.7645.1	chr12	+	222	1	Intergenic	novelGene_6285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTTTTTAGAAT	3254	False	NA	NA	False	NA	NA	NA	59161542	59161764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59161500_59161800
ES.7646.1	chr12	+	2746	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	57	1631	57	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAAATTATTTC	NA	False	NA	4	True	AATAAA	-18	NA	59178128	59236738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.10	chr12	+	2904	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.330341874269	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTTCCATAAGTTAG	NA	False	NA	54	True	AATAAA	-18	NA	59178233	59237006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206428_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219317_59219379_59220891_59220975_59223118_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.11	chr12	+	2819	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	100.959405269085	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178235	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209707_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.12	chr12	+	2836	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	-2	-49	-2	0	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTCCATAAGTTAGTC	NA	False	NA	56	True	AATAAA	-20	NA	59178236	59237008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.13	chr12	+	2738	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	105.370577855898	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178240	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59232514_59232574_59235096_59235332_59236421
ES.7646.14	chr12	+	2859	23	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.009238643082	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178240	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59183008_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.15	chr12	+	2729	23	FSM	ENSMUSG00000021000.18	ENSMUST00000177162.8	2728	23	-47	46	2	0	multi-exon	FALSE	canonical	1	5	junction_18	104.581584665942	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178240	59236962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.16	chr12	+	6020	23	NIC	ENSMUSG00000021000.18	novel	2649	25	NA	NA	6	0	intron_retention	FALSE	canonical	3	371	junction_5	45.5919967240881	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAAATTATTTC	NA	False	NA	4	True	AATAAA	-18	NA	59178244	59236738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.18	chr12	+	2821	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	135.459548297463	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178250	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193724_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217047_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.19	chr12	+	2924	25	NNC	ENSMUSG00000021000.18	novel	2649	25	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	133.317909264118	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178250	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226256_59226336_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.2	chr12	+	2941	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	132	1361	-35	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTCCATAAGTTAGTC	NA	False	NA	56	True	AATAAA	-20	NA	59178203	59237008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.20	chr12	+	6236	23	NIC	ENSMUSG00000021000.18	novel	2649	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	371	junction_5	45.5919967240881	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178252	59236962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.21	chr12	+	2834	24	NNC	ENSMUSG00000021000.18	novel	2649	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	102.574109867563	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178252	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215813_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.22	chr12	+	2714	23	NNC	ENSMUSG00000021000.18	novel	2785	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	128.135194615584	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178252	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209787_59215757_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.23	chr12	+	2475	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	103.666525852035	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTATGGGTAAATTA	NA	False	NA	0	True	AATAAA	-14	NA	59178266	59236734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209718_59215760_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.24	chr12	+	10975	21	NIC	ENSMUSG00000021000.18	novel	2728	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	371	junction_5	45.2730604222865	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178266	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.25	chr12	+	2803	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	102.253659905566	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178266	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207047_59209686_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.26	chr12	+	2788	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	103.289140294784	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178266	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220932_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.27	chr12	+	2493	23	NNC	ENSMUSG00000021000.18	novel	2785	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_11	125.419362655555	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATGGGTAAATTATT	NA	False	NA	2	True	AATAAA	-16	NA	59178266	59236736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209707_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.28	chr12	+	2807	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	106.009238643082	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178266	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.3	chr12	+	5488	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-17	0	intron_retention	FALSE	canonical	3	371	junction_5	43.8291432913409	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178221	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.30	chr12	+	2609	23	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	106.009238643082	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGTAAATTATTTCCATT	NA	False	NA	8	True	AATAAA	-22	NA	59178267	59236742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59183002_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.31	chr12	+	2033	15	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	122.535480076389	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTCTTGTTTGGTATT	NA	False	NA	5	True	AATAAA	-13	NA	59178267	59236957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201214_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.32	chr12	+	2744	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	105.56832615706	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTGTTTGGTATTA	NA	False	NA	6	True	AATAAA	-14	NA	59178267	59236958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.33	chr12	+	2717	23	NNC	ENSMUSG00000021000.18	novel	2785	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	127.904051073419	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178267	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219354_59220905_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.34	chr12	+	2597	23	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	106.009238643082	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATGGGTAAATTATT	NA	False	NA	2	True	AATAAA	-16	NA	59178267	59236736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182986_59184473_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.38	chr12	+	2822	23	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.009238643082	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTGTTTGGTATTA	NA	False	NA	6	True	AATAAA	-14	NA	59178267	59236958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182999_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.39	chr12	+	2723	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	102.253659905566	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178267	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209771_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.4	chr12	+	2581	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	-17	221	-17	0	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGGGTAAATTATTTC	NA	False	NA	4	True	AATAAA	-18	NA	59178221	59236738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.41	chr12	+	2795	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	103.289140294784	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178267	59236962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219343_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.42	chr12	+	4353	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	8	0	intron_retention	FALSE	canonical	3	371	junction_5	44.7434375815222	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178274	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.43	chr12	+	2715	23	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	105.997631737149	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178275	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.45	chr12	+	2834	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	103.289140294784	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGGTTCCATAAGTTA	NA	False	NA	53	True	AATAAA	-17	NA	59178276	59237005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219367_59220910_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.48	chr12	+	4302	24	NNC	ENSMUSG00000021000.18	novel	2291	23	NA	NA	113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	102.972237343451	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178400	59236962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59179995_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.5	chr12	+	2520	23	FSM	ENSMUSG00000021000.18	ENSMUST00000177162.8	2728	23	-65	273	-16	-1	multi-exon	FALSE	canonical	1	5	junction_18	104.581584665942	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTTATGGGTAAATTAT	NA	False	NA	1	True	AATAAA	-15	NA	59178222	59236735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.50	chr12	+	1980	15	ISM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	26798	1	-4639	-1	3prime_fragment	FALSE	canonical	3	389	junction_8	41.4800788183377	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTGTTTGGTATTA	NA	False	NA	6	True	AATAAA	-14	NA	59205036	59236958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.51	chr12	+	1203	9	ISM	ENSMUSG00000021000.18	ENSMUST00000176617.8	1935	17	21444	2	1967	0	3prime_fragment	FALSE	canonical	3	389	junction_2	34.9765546473634	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATGGGTAAATTATT	NA	False	NA	2	True	AATAAA	-16	NA	59217740	59236736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.52	chr12	+	1509	8	NNC	ENSMUSG00000021000.18	novel	881	4	NA	NA	4084	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.320565812665	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAAACTAGCCA	NA	False	NA	25	True	AATAAA	-33	NA	59219857	59236977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59220029_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.53	chr12	+	1373	8	NNC	ENSMUSG00000021000.18	novel	881	4	NA	NA	4874	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166.320565812665	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59220647	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59220701_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.54	chr12	+	1247	9	NNC	ENSMUSG00000021000.18	novel	881	4	NA	NA	4934	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	237.454699627108	369	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTATGGGTAAATTATT	NA	False	NA	2	True	AATAAA	-16	NA	59220707	59236736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59220772_59220891_59220975_59223118_59223246_59226128_59226217_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.55	chr12	+	1577	1	NIC	ENSMUSG00000021000.18	novel	4194	30	NA	NA	-3604	1976	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGACGAAGACAA	NA	False	NA	NA	False	NA	NA	NA	59222694	59224271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59222700_59224300
ES.7646.56	chr12	+	5150	4	ISM	ENSMUSG00000021000.18	ENSMUST00000177222.8	758	8	11127	-533	473	0	3prime_fragment	FALSE	canonical	3	460	junction_2	9.20144916122817	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59226771	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.57	chr12	+	2391	1	NIC	ENSMUSG00000021000.18	novel	4194	30	NA	NA	4790	-1826	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGCTCCCCTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	59231088	59233479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_59231100_59233500
ES.7646.6	chr12	+	2782	23	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	106.009238643082	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTTGTTTGGTATTA	NA	False	NA	6	True	AATAAA	-14	NA	59178227	59236958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182919_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.7	chr12	+	2617	24	NNC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	103.289140294784	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTATGGGTAAATTA	NA	False	NA	0	True	AATAAA	-14	NA	59178231	59236734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219371_59220905_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.8	chr12	+	2890	25	FSM	ENSMUSG00000021000.18	ENSMUST00000176322.8	2649	25	-20	-221	-6	0	multi-exon	FALSE	canonical	3	12	junction_5	130.239736213219	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178232	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7646.9	chr12	+	2800	23	NNC	ENSMUSG00000021000.18	novel	2785	23	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	128.132654981965	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178232	59236959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_59178391_59182849_59182982_59184357_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ES.7647.1	chr12	+	1196	1	Intergenic	novelGene_6286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAAATCTCCAAT	NA	False	NA	NA	False	NA	NA	NA	59241419	59242615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59241400_59242600
ES.7648.1	chr12	-	3821	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	-122	-11	-122	11	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTATTGTATATAAAAT	NA	False	NA	0	True	AATAAA	-26	NA	59266633	59247429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
ES.7648.2	chr12	-	3459	4	NNC	ENSMUSG00000035329.8	novel	3688	4	NA	NA	240	-1	intron_retention	FALSE	canonical	0	0	junction_2	22.6274169979695	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGATGAATTTTAT	NA	False	NA	-12	True	AATAAA	-14	NA	59266271	59247441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59249466_59251096_59251783_59252754_59252878_59265645
ES.7648.3	chr12	-	5000	3	NIC	ENSMUSG00000035329.8	novel	3688	4	NA	NA	318	-1	intron_retention	FALSE	canonical	3	48	junction_2	1	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTGTGATGAATTTTAT	NA	False	NA	-12	True	AATAAA	-14	NA	59266193	59247441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_59251783_59252766_59252878_59265645
ES.7648.4	chr12	-	3768	5	NNC	ENSMUSG00000035329.8	novel	3688	4	NA	NA	245	-6	intron_retention	FALSE	canonical	0	0	junction_3	24.5102019575523	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACTATTGTGATG	NA	False	NA	-20	True	AATAAA	-6	NA	59266266	59247449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_59249466_59251096_59251783_59252766_59252878_59258802_59259137_59265645
ES.7648.5	chr12	-	2668	1	Genic_Genomic	ENSMUSG00000035329.8	novel	NA	NA	NA	NA	-21	-12527	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGGAGGGAGGGCATAGT	NA	False	NA	NA	False	NA	NA	NA	59266532	59263864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_59263900_59266500
ES.7649.1	chr12	-	180	1	Intergenic	novelGene_6287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	59310876	59310696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_59310700_59310900
ES.765.1	chr1	-	158	1	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74796302	74796144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74796100_74796300
ES.7650.1	chr12	+	4133	1	Intergenic	novelGene_6288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	59490078	59494211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_59490100_59494200
ES.7651.1	chr12	+	143	1	Intergenic	novelGene_6289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	60033458	60033601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_60033500_60033600
ES.7652.1	chr12	-	4444	1	Intergenic	novelGene_6290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	60758216	60753772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_60753800_60758200
ES.7653.1	chr12	+	7112	1	Intergenic	novelGene_6291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62223874	62230986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_62223900_62231000
ES.7654.1	chr12	+	254	1	Intergenic	novelGene_6292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTACCCCATCAAG	NA	False	NA	NA	False	AATAAA	-27	NA	62245699	62245953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_62245700_62246000
ES.7655.1	chr12	-	2361	4	Genic_Genomic	ENSMUSG00000114078.2	novel	1117	1	NA	NA	691	17120	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAATAATAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	62750371	62732825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_62734770_62734950_62735097_62750017_62750155_62750237
ES.7656.1	chr12	-	180	1	Intergenic	novelGene_6293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAGATCAAACA	NA	False	NA	NA	False	NA	NA	NA	63439887	63439707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_63439700_63439900
ES.7657.1	chr12	+	193	1	Intergenic	novelGene_6294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTACTCACATGGTCTAT	NA	False	NA	NA	False	NA	NA	NA	64376674	64376867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_64376700_64376900
ES.7658.1	chr12	+	2948	2	Intergenic	novelGene_6295	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAATATATATATA	NA	False	NA	NA	False	NA	NA	NA	64533806	64540674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_64533925_64537844
ES.7659.1	chr12	+	1368	1	FSM	ENSMUSG00000091905.4	ENSMUST00000167639.4	691	1	28	-705	28	705	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	NA	False	NA	43	True	AATAAA	-42	NA	64833112	64834480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_64833100_64834500
ES.766.1	chr1	+	1674	4	FSM	ENSMUSG00000033227.8	ENSMUST00000006716.8	2071	4	22	375	22	345	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGAGAGGAGGTAGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	74811072	74824106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_74811382_74821260_74821482_74821718_74822054_74823297
ES.766.2	chr1	+	745	1	NIC	ENSMUSG00000033227.8	novel	2071	4	NA	NA	1694	275	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAATATTCCTCAGAAT	6221	False	NA	NA	False	AATAAA	-22	NA	74823291	74824036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_74823300_74824000
ES.7660.1	chr12	+	3090	6	NNC	ENSMUSG00000047227.6	novel	1468	5	NA	NA	-90	1429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.687001221723	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGTCTCCCAGCTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	64964589	64972795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_64964966_64967055_64967158_64967578_64968104_64969098_64969189_64970280_64970416_64970933
ES.7660.2	chr12	+	2969	5	FSM	ENSMUSG00000047227.6	ENSMUST00000058135.6	1468	5	-71	-1430	-71	1429	multi-exon	FALSE	canonical	3	22	junction_3	5.11737237261468	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGTCTCCCAGCTTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	64964608	64972795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_64964966_64967578_64968104_64969098_64969189_64970280_64970416_64970933
ES.7660.3	chr12	+	1612	6	NNC	ENSMUSG00000047227.6	novel	1468	5	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	13.3176574516692	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGTACTTTTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	64964622	64971365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_64964966_64967578_64968104_64969098_64969189_64969455_64969543_64970280_64970416_64970933
ES.7660.4	chr12	+	1169	5	FSM	ENSMUSG00000047227.6	ENSMUST00000058135.6	1468	5	7	292	7	-67	multi-exon	FALSE	canonical	3	22	junction_3	5.11737237261468	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTCATCATTGGTT	NA	False	NA	NA	False	AATAAA	-14	NA	64964686	64971073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_64964966_64967578_64968104_64969098_64969189_64970280_64970416_64970933
ES.7661.1	chr12	-	6509	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	-20	-30	-20	30	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATCTTTGTCATGAAT	NA	False	NA	26	True	NA	NA	NA	65012328	64985576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
ES.7661.2	chr12	-	7867	1	NIC	ENSMUSG00000020948.10	novel	6459	5	NA	NA	16671	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATCATGTAATCATTA	NA	False	NA	-4	True	NA	NA	NA	64993473	64985606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_64985600_64993500
ES.7661.3	chr12	-	5654	5	NNC	ENSMUSG00000020948.10	novel	6459	5	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.04285397107271	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTATCATGTAATCA	NA	False	NA	-7	True	NA	NA	NA	65012285	64985609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_64990388_64996787_64996997_64998149_64998594_65004391_65004512_65012182
ES.7661.4	chr12	-	5733	6	NNC	ENSMUSG00000020948.10	novel	6459	5	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.2	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTATCATGTAATCA	NA	False	NA	-7	True	NA	NA	NA	65012278	64985609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65003699_65004391_65004512_65012182
ES.7661.5	chr12	-	4450	4	ISM	ENSMUSG00000020948.10	ENSMUST00000021331.9	2024	5	5904	-2767	5904	-1612	3prime_fragment	FALSE	canonical	3	14	junction_1	3.29983164553722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCTGGTGTTGAAAGT	NA	False	NA	NA	False	ATTAAA	-32	NA	65004240	64987218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612
ES.7661.6	chr12	-	3749	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	23	2687	2	1692	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTATTGTGGTTGGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	65012285	64988293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
ES.7661.7	chr12	-	2024	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	19	4416	-2	-37	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGACCTAAGCAATTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	65012289	64990022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
ES.7662.1	chr12	+	6450	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-78	0	-78	0	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012499	65069347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.10	chr12	+	6540	21	FSM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	-155	1	-19	1	multi-exon	FALSE	canonical	2	3	junction_8	35.8941499411812	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGACAGGTGTCCT	NA	False	NA	8	True	AATAAA	-16	NA	65012558	65069346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.11	chr12	+	6390	20	NNC	ENSMUSG00000035614.12	novel	6372	20	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	36.4564780559473	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATGTGTGACAGGTGTC	NA	False	NA	6	True	AATAAA	-14	NA	65012571	65069344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067190_65068213
ES.7662.12	chr12	+	4294	6	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-6	38035	-6	-421	5prime_fragment	FALSE	canonical	3	80	junction_1	12.57616793781	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAATTTGATTTAGCT	NA	False	NA	NA	False	AGTAAA	-19	NA	65012571	65031312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101
ES.7662.13	chr12	+	7727	20	NNC	ENSMUSG00000035614.12	novel	6372	20	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	36.3426292884968	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012571	65069347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063760_65064871_65066126_65067087_65067175_65068213
ES.7662.14	chr12	+	4051	20	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	10875	126	-3799	-124	3prime_fragment	FALSE	canonical	2	3	junction_7	35.6581180804814	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTGTAATTCTCAAAAAT	1761	False	NA	NA	False	TATAAA	-20	NA	65023588	65069221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.16	chr12	+	3122	14	NIC	ENSMUSG00000035614.12	novel	6372	20	NA	NA	-974	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	8.30769230769231	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGACAGGTGTCCT	8292	False	NA	8	True	AATAAA	-16	NA	65030119	65069346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.17	chr12	+	2331	1	FSM	ENSMUSG00000035614.12	ENSMUST00000222425.2	1815	1	740	-1256	740	1254	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGGTGGTGGCACAT	6538	False	NA	NA	False	NA	NA	NA	65068270	65070601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65068300_65070600
ES.7662.2	chr12	+	3242	6	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-73	39154	-73	962	5prime_fragment	FALSE	canonical	3	80	junction_1	12.57616793781	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTGCCATGAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	65012504	65030193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101
ES.7662.3	chr12	+	6216	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-62	218	-62	-216	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTGAATGTAACTTTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	65012515	65069129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.4	chr12	+	3257	7	NIC	ENSMUSG00000035614.12	novel	6372	20	NA	NA	-59	961	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.3840803781865	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTCTGCCATGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	65012518	65030192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65014803_65016999_65017030_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101
ES.7662.5	chr12	+	8813	19	NIC	ENSMUSG00000035614.12	novel	6372	20	NA	NA	-39	0	intron_retention	FALSE	canonical	3	17	junction_7	35.4987827995118	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTGACAGGTGTCC	NA	False	NA	7	True	AATAAA	-15	NA	65012538	65069345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.7	chr12	+	4457	10	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-36	24947	-36	673	5prime_fragment	FALSE	canonical	3	17	junction_7	40.2117850178401	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGATCTGTTCAGTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	65012541	65044400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665
ES.7662.8	chr12	+	5902	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	-33	503	-33	453	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTTCTGCTATGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	65012544	65068844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7662.9	chr12	+	6544	21	NNC	ENSMUSG00000035614.12	novel	6386	21	NA	NA	-32	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	36.8281142607112	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGACAGGTGTCCT	NA	False	NA	8	True	AATAAA	-16	NA	65012545	65069346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055332_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ES.7663.1	chr12	-	3171	6	NNC	ENSMUSG00000113298.2	novel	317	2	NA	NA	-481	14830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCCGCTGAGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	65030191	65012573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65014800_65023465_65023625_65024941_65025076_65027354_65027651_65029216_65029481_65030099
ES.7663.2	chr12	-	3310	7	NNC	ENSMUSG00000113298.2	novel	317	2	NA	NA	-481	14826	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCCGCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	65030191	65012577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65014800_65023465_65023625_65024347_65024499_65024949_65025076_65027354_65027651_65029216_65029481_65030099
ES.7664.1	chr12	-	1810	1	Antisense	novelGene_ENSMUSG00000035614.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACTAAAAAAAAAAA	7358	False	NA	NA	False	NA	NA	NA	65066582	65064772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65064800_65066600
ES.7665.1	chr12	+	169	1	Intergenic	novelGene_6296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATCATCTTAAAAAG	6721	False	NA	NA	False	NA	NA	NA	65082320	65082489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_65082300_65082500
ES.7666.1	chr12	+	2918	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	-32	1183	-32	47	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTCTTGAAGTAAAT	7475	False	NA	67	True	AATAGA	-5	NA	65083074	65108977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.11	chr12	+	3596	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-5	4	intron_retention	FALSE	canonical	3	88	junction_8	113.573842725688	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7502	False	NA	24	True	AATAAA	-21	NA	65083101	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.12	chr12	+	3009	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-3	4	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	128.051189540969	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7504	False	NA	24	True	AATAAA	-21	NA	65083103	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.13	chr12	+	3361	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	2	intron_retention	FALSE	canonical	3	89	junction_3	99.633945404782	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7507	False	NA	22	True	AATAAA	-19	NA	65083106	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.14	chr12	+	3691	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	1	intron_retention	FALSE	canonical	3	127	junction_7	93.07714094592	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTTGATGAATTCATT	7508	False	NA	21	True	AATAAA	-18	NA	65083107	65108931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.15	chr12	+	3172	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7508	False	NA	22	True	AATAAA	-19	NA	65083107	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.16	chr12	+	4917	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	1	-2	intron_retention	FALSE	canonical	3	127	junction_7	93.07714094592	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCTGTGGTCTCCT	7509	False	NA	6	True	AATAAA	-14	NA	65083108	65110158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.17	chr12	+	4167	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7509	False	NA	8	True	AATAAA	-16	NA	65083108	65110160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.18	chr12	+	3285	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	1	3	intron_retention	FALSE	canonical	3	22	junction_4	146.967328190845	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGATGAATTCATTTG	7509	False	NA	23	True	AATAAA	-20	NA	65083108	65108933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.19	chr12	+	3461	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	1	-5	1	4	multi-exon	FALSE	canonical	3	88	junction_9	125.885678620058	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7509	False	NA	24	True	AATAAA	-21	NA	65083108	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.2	chr12	+	3500	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-11	2	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7496	False	NA	22	True	AATAAA	-19	NA	65083095	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.21	chr12	+	2954	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	127.94187136735	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAATTGTTGATGAA	7510	False	NA	15	True	AATAAA	-12	NA	65083109	65108925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102388_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.22	chr12	+	3048	16	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	144.157228978177	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7510	False	NA	22	True	AATAAA	-19	NA	65083109	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090541_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.23	chr12	+	3677	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	4	intron_retention	FALSE	canonical	3	89	junction_3	100.949210277028	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.24	chr12	+	8489	12	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	251	junction_3	73.4839050236217	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7510	False	NA	20	True	AATAAA	-17	NA	65083109	65108930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.25	chr12	+	4880	11	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	2	intron_retention	FALSE	canonical	3	251	junction_3	69.1603932898013	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7510	False	NA	22	True	AATAAA	-19	NA	65083109	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.27	chr12	+	3072	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.28	chr12	+	8392	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	2	intron_retention	FALSE	canonical	3	22	junction_4	146.590723569694	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7510	False	NA	22	True	AATAAA	-19	NA	65083109	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.29	chr12	+	3276	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	4	intron_retention	FALSE	canonical	3	22	junction_4	143.680138579493	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.3	chr12	+	3289	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-11	4	intron_retention	TRUE	canonical	3	68	junction_3	136.140842104377	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7496	False	NA	24	True	AATAAA	-21	NA	65083095	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.30	chr12	+	3805	12	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	2	4	intron_retention	FALSE	canonical	3	251	junction_3	66.9768678458935	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7510	False	NA	24	True	AATAAA	-21	NA	65083109	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.31	chr12	+	4298	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7510	False	NA	8	True	AATAAA	-16	NA	65083109	65110160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.33	chr12	+	2934	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7511	False	NA	19	True	AATAAA	-16	NA	65083110	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.34	chr12	+	4382	17	NNC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	161.48214878122	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTATTTGTCCTGTGGTCT	7511	False	NA	3	True	AATAAA	-11	NA	65083110	65110155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095045_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.35	chr12	+	4157	17	NNC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	166.486286503574	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7511	False	NA	19	True	AATAAA	-16	NA	65083110	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095264_65099274_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104505_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.36	chr12	+	4683	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	3	-1229	3	-2	multi-exon	FALSE	canonical	3	88	junction_9	125.885678620058	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCTGTGGTCTCCT	7511	False	NA	6	True	AATAAA	-14	NA	65083110	65110158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.37	chr12	+	3147	13	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	3	-4	intron_retention	FALSE	canonical	3	174	junction_3	84.1391043979486	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAATTGTTGATGAA	7511	False	NA	15	True	AATAAA	-12	NA	65083110	65108925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.38	chr12	+	4862	13	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_8	132.460345219071	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7511	False	NA	7	True	AATAAA	-15	NA	65083110	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103078_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.39	chr12	+	3484	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-2	intron_retention	FALSE	canonical	3	68	junction_3	122.29941916867	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	7511	False	NA	17	True	AATAAA	-14	NA	65083110	65108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.40	chr12	+	4274	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	144.157228978177	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7511	False	NA	7	True	AATAAA	-15	NA	65083110	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090541_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.41	chr12	+	4463	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_1	149.548672864575	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	7511	False	NA	5	True	AATAAA	-13	NA	65083110	65110157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.42	chr12	+	4812	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	-1	intron_retention	FALSE	canonical	3	88	junction_8	113.573842725688	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7511	False	NA	7	True	AATAAA	-15	NA	65083110	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.43	chr12	+	3348	14	NNC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-1	intron_retention	FALSE	non_canonical	0	0	junction_8	141.524037726592	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAATTGTTGATGAATTC	7511	False	NA	18	True	AATAAA	-15	NA	65083110	65108928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101907_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924
ES.7666.44	chr12	+	4228	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	128.051189540969	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7511	False	NA	8	True	AATAAA	-16	NA	65083110	65110160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.45	chr12	+	4396	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7511	False	NA	7	True	AATAAA	-15	NA	65083110	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.46	chr12	+	3557	14	NNC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_3	142.982061191204	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	7511	False	NA	17	True	AATAAA	-14	NA	65083110	65108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094909_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.47	chr12	+	4105	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	3	-3	intron_retention	FALSE	canonical	0	0	junction_1	158.010785340823	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	7511	False	NA	5	True	AATAAA	-13	NA	65083110	65110157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924
ES.7666.48	chr12	+	6749	3	ISM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	5	12652	5	-622	intron_retention	FALSE	canonical	3	288	junction_2	19.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACATTGTAGT	7513	False	NA	NA	False	AATAGA	-36	NA	65083112	65096277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65083243_65089234_65089582_65090005
ES.7666.49	chr12	+	4707	13	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	8	-1	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7516	False	NA	7	True	AATAAA	-15	NA	65083115	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.5	chr12	+	2796	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	123.387828463823	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7498	False	NA	22	True	AATAAA	-19	NA	65083097	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103078_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.50	chr12	+	4495	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	8	-1	intron_retention	FALSE	canonical	3	22	junction_4	143.680138579493	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	7516	False	NA	7	True	AATAAA	-15	NA	65083115	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.52	chr12	+	3601	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	8	0	intron_retention	FALSE	canonical	3	15	junction_8	126.49625202016	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7516	False	NA	20	True	AATAAA	-17	NA	65083115	65108930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102388_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.53	chr12	+	3373	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	8	4	intron_retention	FALSE	canonical	3	68	junction_3	128.520069106989	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGATGAATTCATTTGG	7516	False	NA	24	True	AATAAA	-21	NA	65083115	65108934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.54	chr12	+	10888	12	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	8	-2	intron_retention	FALSE	canonical	3	88	junction_6	123.457357043898	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCTGTGGTCTCCT	7516	False	NA	6	True	AATAAA	-14	NA	65083115	65110158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65100226_65100744_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.55	chr12	+	3379	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	8	0	intron_retention	FALSE	canonical	3	22	junction_4	141.497403884744	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7516	False	NA	20	True	AATAAA	-17	NA	65083115	65108930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.57	chr12	+	3389	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	9	-2	intron_retention	FALSE	canonical	3	68	junction_3	128.644126272791	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	7517	False	NA	17	True	AATAAA	-14	NA	65083116	65108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.58	chr12	+	4033	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	9	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	142.982061191204	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTATTTGTCCTGTGGT	7517	False	NA	1	True	AATAAA	-9	NA	65083116	65110153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.59	chr12	+	3558	16	NNC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	9	-2	intron_retention	FALSE	canonical	0	0	junction_4	168.408709196803	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	7517	False	NA	17	True	AATAAA	-14	NA	65083116	65108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65091160_65091250_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102388_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.6	chr12	+	4078	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	-9	0	-9	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7498	False	NA	8	True	AATAAA	-16	NA	65083097	65110160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.60	chr12	+	3690	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	9	0	intron_retention	FALSE	canonical	3	88	junction_7	101.162822551897	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7517	False	NA	20	True	AATAAA	-17	NA	65083116	65108930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.61	chr12	+	1544	8	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	12	75	intron_retention	FALSE	canonical	3	68	junction_3	119.133607040711	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTGACACCATTGTGAA	7520	False	NA	NA	False	TATAAA	-19	NA	65083119	65100904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744
ES.7666.62	chr12	+	4317	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	12	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	142.964424479192	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCCTGTGGTCTCCT	7520	False	NA	6	True	AATAAA	-14	NA	65083119	65110158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.63	chr12	+	3085	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	142.964424479192	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTTGATGAATTCATT	7525	False	NA	21	True	AATAAA	-18	NA	65083124	65108931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.65	chr12	+	3280	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-12	0	intron_retention	FALSE	canonical	3	68	junction_3	103.790127336584	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7528	False	NA	19	True	AATAAA	-16	NA	65083127	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.66	chr12	+	3151	15	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	68	junction_3	119.000450179221	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAATTGTTGATGAATTC	7528	False	NA	18	True	AATAAA	-15	NA	65083127	65108928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.67	chr12	+	3494	14	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	-9	2	intron_retention	FALSE	canonical	3	22	junction_4	133.115023447602	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7531	False	NA	22	True	AATAAA	-19	NA	65083130	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.68	chr12	+	5996	1	FSM	ENSMUSG00000035597.20	ENSMUST00000223105.2	1692	1	-3971	-333	-2982	333	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTTTAAACTTTGTT	NA	False	NA	NA	False	NA	NA	NA	65086794	65092790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65086800_65092800
ES.7666.69	chr12	+	5495	10	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-1943	2	intron_retention	FALSE	canonical	3	251	junction_1	65.5740087022591	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	NA	False	NA	22	True	AATAAA	-19	NA	65087833	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.7	chr12	+	3489	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-8	0	intron_retention	FALSE	canonical	3	15	junction_9	136.198628210899	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7499	False	NA	19	True	AATAAA	-16	NA	65083098	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102388_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.70	chr12	+	5032	7	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	-343	-1	intron_retention	FALSE	canonical	3	334	junction_1	38.2219395984383	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	NA	False	NA	7	True	AATAAA	-15	NA	65094746	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65095055_65100059_65100226_65100744_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924
ES.7666.71	chr12	+	3441	11	ISM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	11778	-1230	-204	-1	3prime_fragment	FALSE	canonical	3	88	junction_5	125.682496792513	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	NA	False	NA	7	True	AATAAA	-15	NA	65094885	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.72	chr12	+	6300	8	NNC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	219	2	intron_retention	FALSE	non_canonical	0	0	junction_1	151.50671838003	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	NA	False	NA	22	True	AATAAA	-19	NA	65095308	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65097266_65099055_65100226_65100744_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.73	chr12	+	4774	10	ISM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	14216	4	-561	-4	3prime_fragment	FALSE	canonical	3	88	junction_4	132.442393720142	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAATTGTTGATGAA	NA	False	NA	15	True	AATAAA	-12	NA	65097323	65108925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.74	chr12	+	5334	7	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	175	-2	intron_retention	FALSE	canonical	3	386	junction_3	31.8886953149371	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAATTGTTGATGAATT	NA	False	NA	17	True	AATAAA	-14	NA	65098059	65108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65100226_65100744_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.75	chr12	+	3386	7	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	733	-473	intron_retention	FALSE	canonical	3	334	junction_2	38.2219395984383	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATTATTTTTTTTATT	NA	False	NA	NA	False	TTTAAA	-15	NA	65098617	65108456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924
ES.7666.76	chr12	+	3360	8	NNC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	1067	0	intron_retention	FALSE	canonical	0	0	junction_7	144.883626770324	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	NA	False	NA	19	True	AATAAA	-16	NA	65098951	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108033_65108197
ES.7666.77	chr12	+	3571	9	ISM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	16552	3	1774	-3	3prime_fragment	FALSE	canonical	3	262	junction_3	63.9921870231046	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGTCCTGTGGTCTCC	NA	False	NA	5	True	AATAAA	-13	NA	65099658	65110157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.78	chr12	+	3889	6	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	3371	-1	intron_retention	FALSE	canonical	3	386	junction_2	34.284690460904	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCCTGTGGTCTCCTT	NA	False	NA	7	True	AATAAA	-15	NA	65101255	65110159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.8	chr12	+	3130	16	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	150.889657991822	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7501	False	NA	19	True	AATAAA	-16	NA	65083100	65108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102388_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7666.9	chr12	+	8817	11	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	-6	2	intron_retention	FALSE	canonical	3	251	junction_3	69.1603932898013	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTGATGAATTCATTT	7501	False	NA	22	True	AATAAA	-19	NA	65083100	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ES.7667.1	chr12	+	6050	1	Antisense	novelGene_ENSMUSG00000020949.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCACAAGTGTCACGG	NA	False	NA	NA	False	NA	NA	NA	65111872	65117922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_65111900_65117900
ES.7667.2	chr12	+	5209	2	Antisense	novelGene_ENSMUSG00000020949.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCACAAGTGTCACGG	NA	False	NA	NA	False	NA	NA	NA	65111872	65117922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_65115886_65116726
ES.7667.3	chr12	+	174	1	Antisense	novelGene_ENSMUSG00000020949.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAGGAAAATCTTTCTAT	1441	False	NA	NA	False	NA	NA	NA	65114537	65114711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_65114500_65114700
ES.7668.1	chr12	+	6447	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-81	1409	-78	83	multi-exon	TRUE	canonical	3	55	junction_4	33.1504521739726	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	9202	False	NA	5	True	AATAAA	-16	NA	65122298	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.10	chr12	+	6162	22	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	83	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	40.035585078307	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	9280	False	NA	5	True	AATAAA	-16	NA	65122376	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.11	chr12	+	6457	24	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	80	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	43.5931959103555	273	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTTTGGTCAGAGTGA	9280	False	NA	2	True	AATAAA	-13	NA	65122376	65177420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134517_65134609_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.13	chr12	+	6125	23	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	29246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	37.8968805275449	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTGGTAGTCTGTTCA	9280	False	NA	NA	False	AATAAA	-27	NA	65122376	65208078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65207947
ES.7668.14	chr12	+	7237	24	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	-325	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	38.7374956957575	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAACATGAACTTTTGT	9280	False	NA	11	True	AATAAA	-24	NA	65122376	65178507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65152991_65153206_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.16	chr12	+	6199	22	NIC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	0	83	combination_of_known_junctions	FALSE	canonical	2	2	junction_9	43.7508924431166	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	9284	False	NA	5	True	AATAAA	-16	NA	65122380	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.17	chr12	+	7443	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	1	331	0	-331	multi-exon	FALSE	canonical	3	55	junction_4	33.1504521739726	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCAATATTTAACATGAAC	9284	False	NA	5	True	AATAAA	-18	NA	65122380	65178501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.18	chr12	+	6406	23	FSM	ENSMUSG00000055884.9	ENSMUST00000222540.2	7816	23	1	1409	0	83	multi-exon	FALSE	canonical	3	18	junction_11	37.5989328580761	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	9284	False	NA	5	True	AATAAA	-16	NA	65122380	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.19	chr12	+	9322	21	NIC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	0	83	intron_retention	FALSE	canonical	3	55	junction_4	33.9582096112266	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	9284	False	NA	5	True	AATAAA	-16	NA	65122380	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.2	chr12	+	6272	22	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	-37	81	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	38.2505761520492	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTTTGGTCAGAGTGAT	9243	False	NA	3	True	AATAAA	-14	NA	65122339	65177421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.20	chr12	+	7418	22	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	4	-220	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	38.2505761520492	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTCCCAGCAGACATAC	9288	False	NA	18	True	AATAAA	-30	NA	65122384	65178612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.21	chr12	+	7331	24	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	6	-221	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	38.7374956957575	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGTCCCAGCAGACATA	9290	False	NA	17	True	AATAAA	-29	NA	65122386	65178611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65152991_65153206_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.22	chr12	+	1672	7	FSM	ENSMUSG00000055884.9	ENSMUST00000223051.2	1682	7	10	0	6	0	multi-exon	FALSE	canonical	3	55	junction_4	45.9737243796207	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATCAGTAGTAGTTACTG	9290	False	NA	NA	False	AATAAA	-12	NA	65122386	65140858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426
ES.7668.24	chr12	+	5686	20	NNC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	-5459	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	37.6414046796926	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	NA	False	NA	5	True	AATAAA	-16	NA	65135052	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171364_65171961_65173288_65173581_65177048
ES.7668.25	chr12	+	5342	17	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	-88	80	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	35.2561497295153	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTTTGGTCAGAGTGA	NA	False	NA	2	True	AATAAA	-13	NA	65140423	65177420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171364_65171961_65173288_65173581_65177048
ES.7668.26	chr12	+	6245	17	NNC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	-73	-333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	41.1441349860463	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCCAATATTTAACATGA	NA	False	NA	3	True	AATAAA	-16	NA	65140438	65178499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168282_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.27	chr12	+	5789	14	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	1986	-325	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	38.2152111974264	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAACATGAACTTTTGT	NA	False	NA	11	True	AATAAA	-24	NA	65142497	65178507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65142680_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.28	chr12	+	5389	14	NNC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	2975	83	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	56.6916292621968	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGTCAGAGTGATTT	NA	False	NA	5	True	AATAAA	-16	NA	65143486	65177423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160729_65160793_65163110_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171364_65171484_65171587_65171961_65173288_65173581_65177048
ES.7668.3	chr12	+	7592	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-34	217	-31	-217	multi-exon	FALSE	canonical	3	55	junction_4	33.1504521739726	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCAGCAGACATACTTC	9249	False	NA	21	True	AATAAA	-33	NA	65122345	65178615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.30	chr12	+	6288	12	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	25161	233	-1544	-233	3prime_fragment	FALSE	canonical	3	64	junction_2	25.1553848793802	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATACTTTCTCCAGTC	NA	False	NA	5	True	AATAAA	-17	NA	65147540	65178599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.31	chr12	+	5432	11	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	26766	333	61	-333	3prime_fragment	FALSE	canonical	3	64	junction_1	23.9225834725265	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCCAATATTTAACATGA	NA	False	NA	3	True	AATAAA	-16	NA	65149145	65178499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.32	chr12	+	5348	11	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	26955	228	250	-228	3prime_fragment	FALSE	canonical	3	64	junction_1	23.9225834725265	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTCTCCAGTCCCAGC	NA	False	NA	10	True	AATAAA	-22	NA	65149334	65178604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.33	chr12	+	3781	1	Intergenic	novelGene_6298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGACCACTAATGACTAT	NA	False	NA	NA	False	NA	NA	NA	65154374	65158155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_65154400_65158200
ES.7668.34	chr12	+	7232	9	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5181	3598	intron_retention	FALSE	canonical	1	4	junction_1	53.4226953176269	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGACACTGCAGAC	NA	False	NA	NA	False	CATAAA	-5	NA	65159824	65182430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65160036_65160547_65160634_65160729_65160793_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.35	chr12	+	3427	10	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5136	-217	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	38.5140666943045	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCAGCAGACATACTTC	NA	False	NA	21	True	AATAAA	-33	NA	65159869	65178615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65159959_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.36	chr12	+	2104	10	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5136	79	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	52.015904500332	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGGTTTGGTCAGAGTG	NA	False	NA	1	True	AATAAA	-12	NA	65159869	65177419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65159959_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168430_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.37	chr12	+	3389	10	NNC	ENSMUSG00000055884.9	novel	563	3	NA	NA	-5136	-332	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	41.1582312545134	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAATATTTAACATGAA	NA	False	NA	4	True	AATAAA	-17	NA	65159869	65178500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65160036_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.38	chr12	+	4099	6	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	-1866	-220	intron_retention	FALSE	canonical	3	118	junction_2	12.0266371026983	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTCCCAGCAGACATAC	NA	False	NA	18	True	AATAAA	-30	NA	65163139	65178612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65163239_65165057_65165215_65167250_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.39	chr12	+	6322	4	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	46462	-3850	-2790	3850	3prime_fragment	FALSE	canonical	3	130	junction_2	10.6562449087639	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTCCTATGTTTGGA	NA	False	NA	NA	False	ATTAAA	-14	NA	65168841	65182682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.4	chr12	+	7355	22	NIC	ENSMUSG00000055884.9	novel	7816	23	NA	NA	0	-332	combination_of_known_junctions	FALSE	canonical	3	11	junction_16	41.8312667186095	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAATATTTAACATGAA	9280	False	NA	4	True	AATAAA	-17	NA	65122376	65178500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.40	chr12	+	6441	3	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	49069	-3853	-183	3853	3prime_fragment	FALSE	canonical	3	130	junction_1	12.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTATGTTTGGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	65171448	65182685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65171961_65173288_65173581_65177048
ES.7668.41	chr12	+	2856	5	Antisense	novelGene_ENSMUSG00000047534.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65195689	65205978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_65196325_65199461_65200667_65201491_65201624_65203765_65203839_65205167
ES.7668.6	chr12	+	7073	22	NIC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	-332	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	39.2587786447856	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCAATATTTAACATGAA	9280	False	NA	4	True	AATAAA	-17	NA	65122376	65178500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65173288_65173581_65177048
ES.7668.7	chr12	+	7408	22	NNC	ENSMUSG00000055884.9	novel	7775	23	NA	NA	0	-216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	45.7282716700727	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCAGCAGACATACTTCA	9280	False	NA	22	True	AATAAA	-34	NA	65122376	65178616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65149335_65149492_65151801_65153666_65160547_65160638_65160735_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7668.8	chr12	+	6748	21	ISM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	-3	5826	0	-4334	5prime_fragment	FALSE	canonical	3	55	junction_4	32.2204903749152	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTTTTTAAAAGATTT	9280	False	NA	NA	False	AATAAA	-20	NA	65122376	65173006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587
ES.7668.9	chr12	+	7599	23	FSM	ENSMUSG00000055884.9	ENSMUST00000222540.2	7816	23	-3	220	0	-220	multi-exon	FALSE	canonical	3	18	junction_11	37.5989328580761	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTCCCAGCAGACATAC	9280	False	NA	18	True	AATAAA	-30	NA	65122376	65178612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148293_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ES.7669.1	chr12	-	3278	5	Antisense	novelGene_ENSMUSG00000035597.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACAGAACCCAAGTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	65103216	65097745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65100223_65100741_65100853_65101927_65102093_65102205_65102538_65103023
ES.7669.10	chr12	-	1104	8	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4561.76916539706	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTGTGTGTTCTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	65120705	65109198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65117545_65117705_65120588
ES.7669.11	chr12	-	951	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3803.75239073208	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTGTGTTCTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	65120719	65109199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113545_65115775_65115884_65116724_65116827_65120588
ES.7669.12	chr12	-	5494	6	NNC	ENSMUSG00000020949.10	novel	1910	6	NA	NA	-14	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	4032.16023491131	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGTGTGTTCTGTA	NA	False	NA	-4	True	AATAAA	-27	NA	65120717	65109199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65113552_65115775_65115884_65116724_65117871_65117931
ES.7669.14	chr12	-	3220	4	NNC	ENSMUSG00000020949.10	novel	654	5	NA	NA	-5	-5	intron_retention	FALSE	canonical	1	1	junction_1	4915.25220331798	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTATTGTGTGTTCT	NA	False	NA	-7	True	AATAAA	-24	NA	65120708	65109202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65113197_65115884_65116724_65116827_65120588
ES.7669.15	chr12	-	4031	5	NIC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	1	-6	intron_retention	FALSE	canonical	3	9641	junction_1	442.411855627762	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTATTTATTGTGTGTTC	NA	False	NA	-8	True	AATAAA	-23	NA	65120735	65109203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65109515_65110451_65110550_65112510_65115884_65116724_65116827_65120588
ES.7669.16	chr12	-	1018	8	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4579.07219904662	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATTTATTGTGTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	65120710	65109204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65118654_65118729_65120588
ES.7669.18	chr12	-	823	6	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	15	5	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	4052.36617299079	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATTTATTGTGTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	65120721	65109204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65115771_65115884_65116724_65116827_65120588
ES.7669.19	chr12	-	4963	4	NIC	ENSMUSG00000020949.10	novel	1233	6	NA	NA	5	5	intron_retention	FALSE	canonical	3	9942	junction_1	410.801114355299	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTATTTATTGTGTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	65120731	65109204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65110550_65112510_65115884_65116724_65116827_65120588
ES.7669.2	chr12	-	4466	3	Antisense	novelGene_ENSMUSG00000035597.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACAGAACCCAAGTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	65103216	65097745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65100223_65100741_65102538_65103023
ES.7669.21	chr12	-	5970	4	NIC	ENSMUSG00000020949.10	novel	654	5	NA	NA	-15	1	intron_retention	FALSE	canonical	3	9641	junction_1	500.36186905079	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGACTTATTTATTGTG	NA	False	NA	-13	True	AATAAA	-18	NA	65120718	65109208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65109515_65110451_65115884_65116724_65116827_65120588
ES.7669.22	chr12	-	745	5	FSM	ENSMUSG00000020949.10	ENSMUST00000220983.2	654	5	-45	-46	-16	1	multi-exon	FALSE	canonical	3	24	junction_2	4405.18495638946	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGACTTATTTATTGTG	NA	False	NA	-13	True	AATAAA	-18	NA	65120719	65109208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65109515_65110451_65110550_65115775_65115884_65116724_65116827_65120588
ES.7669.24	chr12	-	729	7	NNC	ENSMUSG00000020949.10	novel	981	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3871.62548406853	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGACTTATTTATTGTG	NA	False	NA	-13	True	AATAAA	-18	NA	65120736	65109208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109278_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.25	chr12	-	4647	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	3784.18498490758	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120717	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65117871_65117931
ES.7669.26	chr12	-	943	7	NNC	ENSMUSG00000020949.10	novel	981	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3784.18498490758	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120736	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120610
ES.7669.27	chr12	-	2626	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	211	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	3784.18498490758	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120463	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65118654
ES.7669.28	chr12	-	1783	6	NIC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-14	0	intron_retention	FALSE	canonical	3	9641	junction_1	450.341648085096	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120717	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65109515_65110451_65110550_65112510_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.3	chr12	-	3174	6	Antisense	novelGene_ENSMUSG00000035597.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACAGAACCCAAGTTC	NA	False	NA	NA	False	AAAAAG	-4	NA	65103216	65097745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65100223_65100741_65100853_65101927_65102093_65102205_65102306_65102409_65102538_65103023
ES.7669.30	chr12	-	969	7	NNC	ENSMUSG00000020949.10	novel	981	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3855.04114764032	1224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120745	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115875_65116720_65116827_65120588
ES.7669.33	chr12	-	501	5	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4548.58853794229	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120708	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109241_65113411_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.35	chr12	-	3215	6	NIC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	19	0	intron_retention	FALSE	canonical	3	9641	junction_1	413.326698871486	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120762	65109209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65115884_65116724_65116827_65120588
ES.7669.38	chr12	-	7706	5	NNC	ENSMUSG00000020949.10	novel	1910	6	NA	NA	-14	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	4268.1629171694	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACTGACTTATTTATT	NA	False	NA	-16	True	AATAAA	-15	NA	65120717	65109211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65109515_65110451_65110550_65112510_65115884_65116724_65117871_65117931
ES.7669.4	chr12	-	3371	4	Antisense	novelGene_ENSMUSG00000035597.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65103216	65097765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65100223_65100741_65100853_65101927_65102538_65103023
ES.7669.40	chr12	-	1175	6	FSM	ENSMUSG00000020949.10	ENSMUST00000221710.2	1233	6	19	39	-14	-39	multi-exon	FALSE	canonical	3	9942	junction_1	352.092828668804	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTTCTCACCTTTT	NA	False	NA	NA	False	NA	NA	NA	65120717	65109917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.41	chr12	-	376	4	ISM	ENSMUSG00000020949.10	ENSMUST00000221710.2	1233	6	17	3638	-16	-26	5prime_fragment	FALSE	canonical	3	9974	junction_2	365.855162598534	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGATAAAACCAACTTTC	NA	False	NA	NA	False	AATACA	-20	NA	65120719	65113516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.42	chr12	-	5831	2	Fusion	ENSMUSG00000020949.10_ENSMUSG00000114157.2	novel	6939	3	NA	NA	-44	-1512	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTGTTGTATTTCTT	NA	False	NA	NA	False	TATAAA	-4	NA	65123133	65117241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_65117871_65117931
ES.7669.5	chr12	-	842	7	NNC	ENSMUSG00000020949.10	novel	1233	6	NA	NA	-14	9212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3872.36826761092	1232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTAACACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	65120717	65099985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65100187_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.6	chr12	-	4753	1	Genic_Genomic	ENSMUSG00000020949.10	novel	NA	NA	NA	NA	-5	729	mono-exon	FALSE	NA	NA	NA	NA	NA	1220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATTCTCCAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65113221	65108468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_65108500_65113200
ES.7669.7	chr12	-	1207	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	80	-265	2	265	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGAGTCTCCATTTT	NA	False	NA	NA	False	AATGAA	-14	NA	65120701	65108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.8	chr12	-	1094	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	-69	-3	-69	3	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTCTGTATTCTA	NA	False	NA	1	True	AATAAA	-32	NA	65120850	65109194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ES.7669.9	chr12	-	3809	1	NIC	ENSMUSG00000020949.10	novel	1910	6	NA	NA	209	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTGTGTGTTCTGTAT	NA	False	NA	-3	True	AATAAA	-28	NA	65113007	65109198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65109200_65113000
ES.767.1	chr1	-	2141	4	NNC	ENSMUSG00000099472.2	novel	758	3	NA	NA	-4782	-1	intron_retention	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGGAGGAGGTGGAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	74821346	74814102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_74814329_74814701_74816319_74817403_74817597_74821241
ES.7670.1	chr12	-	603	1	Intergenic	novelGene_6297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTTGTATCTAGATAT	NA	False	NA	NA	False	NA	NA	NA	65127798	65127195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_65127200_65127800
ES.7671.1	chr12	-	273	1	Intergenic	novelGene_6299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAACA	3582	False	NA	NA	False	NA	NA	NA	65155622	65155349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_65155300_65155600
ES.7672.1	chr12	-	1885	1	Antisense	novelGene_ENSMUSG00000055884.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTCAAAAGAACAATAATG	4055	False	NA	NA	False	ATTAAA	-11	NA	65168534	65166649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_65166600_65168500
ES.7673.1	chr12	-	166	1	Intergenic	novelGene_6300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	65173232	65173066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_65173100_65173200
ES.7674.1	chr12	-	4077	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-17	401	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.162095483737	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAACAAGTGGAGGGA	NA	False	NA	NA	False	AATAAA	-24	NA	65219395	65179106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65179124_65179505_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.10	chr12	-	3191	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	101.824467699184	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219384	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
ES.7674.11	chr12	-	3026	12	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	140.530223801334	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219362	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
ES.7674.12	chr12	-	6940	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	216	junction_11	56.1263455666469	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219386	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.14	chr12	-	3405	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.895791566419	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219362	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183517_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.15	chr12	-	3363	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	155.348434477707	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219352	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199113_65199318_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
ES.7674.16	chr12	-	4028	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	108.791369741251	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219371	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195501_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.18	chr12	-	4187	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	21199	0	3713	0	3prime_fragment	FALSE	canonical	3	333	junction_4	33.8201944931657	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65198155	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495
ES.7674.19	chr12	-	3039	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	122.11116285858	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219350	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195731_65196078_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.2	chr12	-	3592	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	150.773116119482	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTGGGTTTGTTGTT	NA	False	NA	-2	True	AATAAA	-21	NA	65219351	65179504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65180947_65181149_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.20	chr12	-	4383	13	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	156.191722465266	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219350	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189229_65189251_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.21	chr12	-	3640	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	105.162095483737	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219354	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195702_65196078_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.22	chr12	-	3500	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	148.834764024567	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219351	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65197233_65197346_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.23	chr12	-	4196	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	132.233115893015	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219329	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199113_65199318_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.25	chr12	-	4832	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	118.242012642373	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219352	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.26	chr12	-	3795	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	153.531107663588	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219350	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199113_65199318_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208381_65219222
ES.7674.27	chr12	-	3813	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	101.179493677466	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219380	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65208176_65208803_65219222
ES.7674.28	chr12	-	3516	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	104.166400788615	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219256	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208579_65208803_65219222
ES.7674.29	chr12	-	3254	12	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	130.458188102454	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219363	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.3	chr12	-	5042	13	FSM	ENSMUSG00000047534.18	ENSMUST00000140391.8	5016	13	-24	-2	-24	2	multi-exon	FALSE	canonical	3	216	junction_11	56.3414072123395	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGGGTTTGTTGT	NA	False	NA	-3	True	AATAAA	-20	NA	65219402	65179505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.31	chr12	-	4371	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	-8	-3	intron_retention	FALSE	canonical	3	78	junction_11	90.7502248249839	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219362	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.32	chr12	-	4755	13	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	2	-3	intron_retention	FALSE	canonical	3	12	junction_11	105.298880177648	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219350	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65208176_65208803_65219222
ES.7674.33	chr12	-	3691	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	102.048632863884	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219379	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195731_65196078_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.34	chr12	-	3362	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.190640655315	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219342	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65197233_65197346_65200579_65200668_65201492_65201624_65203765_65203836_65205147_65205636_65219222
ES.7674.35	chr12	-	3099	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	107.383625639832	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219338	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205363_65219222
ES.7674.36	chr12	-	3914	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-19	-3	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	108.187594277512	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219397	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.37	chr12	-	3227	12	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	173.509901591849	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTTGTTTCTGGGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	65219350	65179510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65190006_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203836_65205168_65205636_65219222
ES.7674.38	chr12	-	2934	10	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.891977691952	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	False	NA	-9	True	AATAAA	-14	NA	65219386	65179511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180267_65187551_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.39	chr12	-	2287	7	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	2344	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.40572525675	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	False	NA	-9	True	AATAAA	-14	NA	65199524	65179511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65185446_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461
ES.7674.4	chr12	-	3916	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	108.362143604982	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGGGTTTGTTGT	NA	False	NA	-3	True	AATAAA	-20	NA	65219351	65179505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.40	chr12	-	7878	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	216	junction_10	58.5001236136294	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	False	NA	-9	True	AATAAA	-14	NA	65219353	65179511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.41	chr12	-	7321	5	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	3644	-4	intron_retention	FALSE	canonical	3	333	junction_2	35.7106426713382	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	False	NA	-9	True	AATAAA	-14	NA	65198224	65179511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495
ES.7674.42	chr12	-	3968	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_4	105.43900898332	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	False	NA	-9	True	AATAAA	-14	NA	65219352	65179511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185528_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.43	chr12	-	5837	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	-1	-5	intron_retention	FALSE	canonical	3	216	junction_10	54.4656992674675	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATTTGTTTCTGGGT	NA	False	NA	-10	True	AATAAA	-13	NA	65219379	65179512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.44	chr12	-	4123	12	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	21	junction_11	106.352136130424	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATTTGTTTCTGGGT	NA	False	NA	-10	True	AATAAA	-13	NA	65219346	65179512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
ES.7674.46	chr12	-	8111	12	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	1	-5	intron_retention	FALSE	canonical	1	4	junction_5	115.836733208126	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATATTTGTTTCTGGGT	NA	False	NA	-10	True	AATAAA	-13	NA	65219351	65179512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65190006_65190167_65195495_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.47	chr12	-	4478	13	FSM	ENSMUSG00000047534.18	ENSMUST00000140391.8	5016	13	-24	562	-24	-562	multi-exon	FALSE	canonical	3	216	junction_11	56.3414072123395	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTTCTTTAGTAATC	NA	False	NA	6	True	ATTAAA	-34	NA	65219402	65180069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.48	chr12	-	3308	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	-564	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	108.187594277512	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGTTTTCTTTAGTAA	NA	False	NA	4	True	ATTAAA	-32	NA	65219352	65180071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.49	chr12	-	4008	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-557	566	-533	-566	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTGTTTTCTTTAGT	NA	False	NA	2	True	ATTAAA	-30	NA	65219911	65180073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.5	chr12	-	3425	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-9	1	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTCTGGGTTTGTTG	NA	False	NA	-4	True	AATAAA	-19	NA	65219387	65179506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.50	chr12	-	2687	12	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-5	-566	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	130.458188102454	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTGTTTTCTTTAGT	NA	False	NA	2	True	ATTAAA	-30	NA	65219359	65180073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.51	chr12	-	3581	16	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-568	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	150.10728015508	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAAGCCTGTTTTCTTTA	NA	False	NA	0	True	ATTAAA	-28	NA	65219338	65180075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65188551_65188679_65189229_65189251_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.52	chr12	-	2869	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-24	-570	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAAGCCTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-26	NA	65219402	65180077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.53	chr12	-	3679	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-7	-570	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	134.493020075317	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCAAGCCTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-26	NA	65219385	65180077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65180947_65181149_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.54	chr12	-	7454	12	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	4	-571	intron_retention	FALSE	non_canonical	0	0	junction_5	116.651844788507	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCAAGCCTGTTTTCT	NA	False	NA	-3	True	ATTAAA	-25	NA	65219348	65180078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195651_65195680_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.55	chr12	-	2837	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-571	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	150.746112827311	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCCAAGCCTGTTTTCT	NA	False	NA	-3	True	ATTAAA	-25	NA	65219350	65180078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189229_65189251_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.56	chr12	-	4373	12	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	12032	573	-5454	-573	3prime_fragment	FALSE	canonical	3	333	junction_4	31.3919503289386	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAAGCCTGTTTT	6188	False	NA	-5	True	ATTAAA	-23	NA	65207322	65180080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168
ES.7674.57	chr12	-	3791	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	0	-573	intron_retention	FALSE	canonical	3	78	junction_11	90.7502248249839	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAAGCCTGTTTT	NA	False	NA	-5	True	ATTAAA	-23	NA	65219352	65180080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.58	chr12	-	7304	12	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	2	-575	intron_retention	FALSE	canonical	3	216	junction_10	58.5001236136294	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACATCCAAGCCTGTT	NA	False	NA	-7	True	ATTAAA	-21	NA	65219350	65180082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.59	chr12	-	6319	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-2	-577	intron_retention	FALSE	canonical	3	216	junction_11	56.1263455666469	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGAACATCCAAGCCTG	NA	False	NA	-9	True	ATTAAA	-19	NA	65219342	65180084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.6	chr12	-	4248	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-230	-1	-206	1	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTCTGGGTTTGTTG	NA	False	NA	-4	True	AATAAA	-19	NA	65219584	65179506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.60	chr12	-	3448	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-579	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	104.166400788615	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGAGAACATCCAAGCC	NA	False	NA	-11	True	ATTAAA	-17	NA	65219350	65180086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205650_65208176_65208803_65219222
ES.7674.61	chr12	-	2563	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-582	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	101.824467699184	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCTTGAGAACATCCAA	NA	False	NA	-14	True	ATTAAA	-14	NA	65219338	65180089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
ES.7674.62	chr12	-	3554	7	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	21250	582	3764	-582	3prime_fragment	FALSE	canonical	3	333	junction_4	33.8201944931657	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCTTGAGAACATCCAA	NA	False	NA	-14	True	ATTAAA	-14	NA	65198104	65180089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495
ES.7674.63	chr12	-	3623	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	2	-582	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	132.233115893015	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCTTGAGAACATCCAA	NA	False	NA	-14	True	ATTAAA	-14	NA	65219338	65180089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199113_65199318_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.65	chr12	-	6079	8	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	1258	-584	intron_retention	FALSE	canonical	0	0	junction_5	169.880149829586	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTCTTGAGAACATCC	NA	False	NA	-16	True	ATTAAA	-12	NA	65200610	65180091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189229_65189251_65189996_65190167_65195495
ES.7674.66	chr12	-	3286	16	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	-584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	146.589676762497	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTCTTGAGAACATCC	NA	False	NA	-16	True	ATTAAA	-12	NA	65219351	65180091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195731_65196078_65196325_65199113_65199318_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.67	chr12	-	4226	13	NNC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	-24	-584	intron_retention	FALSE	canonical	3	12	junction_11	105.298880177648	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTCTTGAGAACATCC	NA	False	NA	-16	True	ATTAAA	-12	NA	65219402	65180091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65208176_65208803_65219222
ES.7674.68	chr12	-	3205	14	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	-2	-584	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	101.179493677466	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTCTTGAGAACATCC	NA	False	NA	-16	True	ATTAAA	-12	NA	65219356	65180091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65208176_65208803_65219222
ES.7674.69	chr12	-	5051	13	NNC	ENSMUSG00000047534.18	novel	2053	7	NA	NA	2	1651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	111.862142339975	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAATGAGAAGAGGTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	65219350	65181445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65183431_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.7	chr12	-	7253	11	NIC	ENSMUSG00000047534.18	novel	5016	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	78	junction_10	95.069237926892	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219350	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_65180400_65180577_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
ES.7674.70	chr12	-	3376	9	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	-33	9806	-9	-6217	5prime_fragment	FALSE	canonical	3	216	junction_7	60.9691264083716	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAACTTGTTTTTTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	65219387	65189313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.71	chr12	-	2654	9	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	4	10491	2	5809	5prime_fragment	FALSE	canonical	3	216	junction_7	60.9691264083716	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAATTTTATTACTGTT	NA	False	NA	NA	False	AAAAAG	-21	NA	65219350	65189998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.72	chr12	-	3364	8	ISM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	2	15112	0	1188	5prime_fragment	FALSE	canonical	3	216	junction_6	64.9458172915968	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	65219352	65194619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.73	chr12	-	178	1	Intergenic	novelGene_6301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	65194943	65194765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_65194800_65194900
ES.7674.8	chr12	-	3984	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	105.162095483737	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219351	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65195651_65195680_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7674.9	chr12	-	4227	15	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	134.493020075317	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219363	65179507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_65180400_65180577_65180633_65180947_65181149_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ES.7675.1	chr12	+	241	1	Intergenic	novelGene_6302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAATCTAAGGAC	NA	False	NA	NA	False	NA	NA	NA	65219975	65220216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_65220000_65220200
ES.7676.1	chr12	+	1986	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	242	0	38	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATGACCTCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	65272532	65275228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_65274272_65274981
ES.7677.1	chr12	+	1838	1	Antisense	novelGene_ENSMUSG00000060499.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTTGAAATTGTGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	66330832	66332670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_66330800_66332700
ES.7678.1	chr12	-	1619	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	-5	-591	-5	591	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCCCTCTTAAGTTAC	NA	False	NA	NA	False	NA	NA	NA	66331180	66329561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_66329600_66331200
ES.7678.2	chr12	-	1094	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	-26	-45	-26	45	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACCCATAGCCTCAG	NA	False	NA	41	True	TTTAAA	-19	NA	66331201	66330107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_66330100_66331200
ES.7679.1	chr12	-	176	1	Intergenic	novelGene_6303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAGTATTTTATTACA	NA	False	NA	NA	False	NA	NA	NA	66354526	66354350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_66354400_66354500
ES.768.1	chr1	+	6752	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTAGGTTGCAAAAA	968	False	NA	NA	False	NA	NA	NA	74856177	74862929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74856200_74862900
ES.7680.1	chr12	+	221	1	Intergenic	novelGene_6304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTTTAATATTTATT	NA	False	NA	NA	False	NA	NA	NA	66818563	66818784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_66818600_66818800
ES.7681.1	chr12	-	181	1	Intergenic	novelGene_6305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAATTTAAATT	NA	False	NA	NA	False	NA	NA	NA	66842443	66842262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_66842300_66842400
ES.7682.1	chr12	+	667	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	-35	-76	-35	76	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTCAATAATGCAT	NA	False	NA	NA	False	NA	NA	NA	67557494	67558161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_67557500_67558200
ES.7682.2	chr12	+	619	2	Genic_Genomic	ENSMUSG00000113948.2	novel	556	1	NA	NA	-35	69	multi-exon	FALSE	non_canonical	2	8	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAATATATATTTCAAT	NA	False	NA	NA	False	NA	NA	NA	67557494	67558154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_67557567_67557607
ES.7683.1	chr12	-	231	1	Intergenic	novelGene_6306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTTACCAGGCTCATT	NA	False	NA	NA	False	NA	NA	NA	68200913	68200682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68200700_68200900
ES.7684.1	chr12	+	5367	1	Intergenic	novelGene_6308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	68604910	68610277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68604900_68610300
ES.7684.12	chr12	+	3743	1	Intergenic	novelGene_6315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTGCTTTCCTACTT	NA	False	NA	NA	False	NA	NA	NA	68605039	68608782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605000_68608800
ES.7684.13	chr12	+	3912	2	Intergenic	novelGene_6316	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTGATAGACAGGC	NA	False	NA	NA	False	NA	NA	NA	68605039	68609020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605472_68605540
ES.7684.14	chr12	+	2232	2	Intergenic	novelGene_6317	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605942_68608942
ES.7684.15	chr12	+	5163	2	Intergenic	novelGene_6318	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605465_68605534
ES.7684.16	chr12	+	4432	2	Intergenic	novelGene_6319	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608909_68609709
ES.7684.17	chr12	+	4954	2	Intergenic	novelGene_6325	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605251_68605528
ES.7684.18	chr12	+	5171	2	Intergenic	novelGene_6326	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605863_68605923
ES.7684.19	chr12	+	3782	2	Intergenic	novelGene_6327	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608611_68610060
ES.7684.2	chr12	+	5246	2	Intergenic	novelGene_6310	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGGCTACATTTCTT	NA	False	NA	NA	False	NA	NA	NA	68604962	68610277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605472_68605540
ES.7684.21	chr12	+	3595	1	Intergenic	novelGene_6322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTGTGCTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	68605040	68608635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605000_68608600
ES.7684.22	chr12	+	3931	3	Intergenic	novelGene_6328	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605040	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608611_68609235_68609385_68610060
ES.7684.24	chr12	+	2974	1	Intergenic	novelGene_6321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGATCTACTTATTG	NA	False	NA	NA	False	NA	NA	NA	68605040	68608014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605000_68608000
ES.7684.26	chr12	+	5090	2	Intergenic	novelGene_6323	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	68605040	68610270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605389_68605528
ES.7684.27	chr12	+	5164	2	Intergenic	novelGene_6324	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	68605040	68610271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605462_68605528
ES.7684.29	chr12	+	4485	3	Intergenic	novelGene_6329	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605042	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605472_68605540_68609385_68610060
ES.7684.3	chr12	+	4708	2	Intergenic	novelGene_6311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68604965	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68609111_68609709
ES.7684.33	chr12	+	4140	3	Intergenic	novelGene_6330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	NA	False	NA	NA	False	NA	NA	NA	68605060	68610274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608838_68609235_68609385_68610060
ES.7684.34	chr12	+	2229	1	Intergenic	novelGene_6332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1055	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTAAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	68605176	68607405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605200_68607400
ES.7684.4	chr12	+	2905	1	Intergenic	novelGene_6312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGCATGCTATTTAGTGC	NA	False	NA	NA	False	NA	NA	NA	68605001	68607906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68605000_68607900
ES.7684.5	chr12	+	4592	2	Intergenic	novelGene_6313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTTC	NA	False	NA	NA	False	NA	NA	NA	68605007	68610275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68609385_68610060
ES.7684.7	chr12	+	3847	3	Intergenic	novelGene_6314	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	31	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605037	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608611_68608837_68608900_68610060
ES.7684.8	chr12	+	4010	2	Intergenic	novelGene_6320	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	68605039	68610272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_68608838_68610060
ES.7685.1	chr12	-	2590	2	Intergenic	novelGene_6307	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTTTTGAGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	68607904	68604848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68605058_68605523
ES.7685.2	chr12	-	2955	1	Intergenic	novelGene_6309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGCTCCTCAGGTTCC	NA	False	NA	NA	False	NA	NA	NA	68607904	68604949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68604900_68607900
ES.7685.3	chr12	-	2823	1	Intergenic	novelGene_6331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGAAATGTAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	68607904	68605081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68605100_68607900
ES.7685.4	chr12	-	2706	1	Intergenic	novelGene_6333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTCTTCAGGTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	68607904	68605198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68605200_68607900
ES.7685.5	chr12	-	2196	1	Intergenic	novelGene_6334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGATTGGTGCACCGG	NA	False	NA	NA	False	NA	NA	NA	68607904	68605708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68605700_68607900
ES.7685.6	chr12	-	1929	1	Intergenic	novelGene_6335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTACCATTGTCAAACA	NA	False	NA	NA	False	NA	NA	NA	68607904	68605975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_68606000_68607900
ES.7686.1	chr12	-	189	1	Intergenic	novelGene_6336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTATGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	69118490	69118301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69118300_69118500
ES.7687.1	chr12	+	177	1	Intergenic	novelGene_6337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAGGAAAGGAA	356	False	NA	NA	False	NA	NA	NA	69123336	69123513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69123300_69123500
ES.7688.1	chr12	+	2006	3	Genic_Genomic	ENSMUSG00000113600.2	novel	680	1	NA	NA	-2929	1227	multi-exon	FALSE	canonical	1	6	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACGTCTTAGAACTTTT	7657	False	NA	NA	False	AATAAA	-17	NA	69166945	69171781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69166981_69167192_69167219_69169836
ES.7688.2	chr12	+	328	3	Antisense	novelGene_ENSMUSG00000113716.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATCTGACCAAGGTGTT	7658	False	NA	NA	False	NA	NA	NA	69166946	69168669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_69166981_69167192_69167219_69168401
ES.7688.3	chr12	+	1045	2	Genic_Genomic	ENSMUSG00000113600.2	novel	680	1	NA	NA	-2877	106	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAGCGTGTACACTGAC	7709	False	NA	NA	False	NA	NA	NA	69166997	69170660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69167219_69169836
ES.7689.1	chr12	-	174	1	Intergenic	novelGene_6338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAGTTATAGT	NA	False	NA	NA	False	NA	NA	NA	69184545	69184371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69184400_69184500
ES.769.1	chr1	-	301	1	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGTTATGAGCACTGT	NA	False	NA	NA	False	NA	NA	NA	74858476	74858175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74858200_74858500
ES.769.2	chr1	-	173	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGTA	NA	False	NA	NA	False	NA	NA	NA	74858477	74858304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74858300_74858500
ES.7690.1	chr12	-	217	1	Intergenic	novelGene_6339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCACCAGCACTTGGGA	NA	False	NA	NA	False	NA	NA	NA	69185666	69185449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69185400_69185700
ES.7691.1	chr12	+	134	1	Intergenic	novelGene_6340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTTA	1308	False	NA	NA	False	NA	NA	NA	69198534	69198668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69198500_69198700
ES.7692.1	chr12	-	366	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	22	2	22	-2	multi-exon	FALSE	canonical	3	25458	junction_2	210	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGTGTGTGTGTTTT	NA	False	NA	-12	True	AATAAA	-16	NA	69205938	69204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69204596_69205434_69205535_69205770
ES.7692.2	chr12	-	1363	1	NIC	ENSMUSG00000034892.9	novel	390	3	NA	NA	-32	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCCTGTGTGTGTGTTTT	NA	False	NA	-12	True	AATAAA	-16	NA	69205860	69204497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69204500_69205900
ES.7692.5	chr12	-	1129	2	FSM	ENSMUSG00000034892.9	ENSMUST00000094291.3	461	2	-35	-633	-35	-3	multi-exon	FALSE	canonical	3	25458	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCCTGTGTGTGTGTTT	NA	False	NA	-13	True	AATAAA	-15	NA	69205863	69204498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69205535_69205770
ES.7693.1	chr12	+	216	1	Intergenic	novelGene_6341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTTTGAGTGTACACAT	NA	False	NA	NA	False	AATAGA	-6	NA	69207681	69207897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69207700_69207900
ES.7694.1	chr12	-	206	1	Intergenic	novelGene_6342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACACCTTCCTAAAGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	69214076	69213870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69213900_69214100
ES.7695.1	chr12	+	1352	4	NNC	ENSMUSG00000034883.10	novel	1500	4	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.7155474012616	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAATGTCTCAGCAGTT	NA	False	NA	8	True	ATTAAA	-22	NA	69215551	69225782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69215654_69218635_69218735_69221165_69221888_69225353
ES.7695.2	chr12	+	1513	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	-12	-1	-12	1	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGTCTCAGCAGTTAA	NA	False	NA	10	True	ATTAAA	-24	NA	69215575	69225784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
ES.7695.3	chr12	+	928	4	NNC	ENSMUSG00000034883.10	novel	1500	4	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	59.1119465270957	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATATCAATGTCTCAGC	NA	False	NA	4	True	ATTAAA	-18	NA	69215601	69225778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69215837_69218635_69218735_69221718_69221888_69225353
ES.7696.1	chr12	+	3237	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	-13	-610	-13	610	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGGCTGGCCTTGTG	2281	False	NA	NA	False	TTTAAA	-17	NA	69230917	69234154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69230900_69234200
ES.7696.2	chr12	+	2620	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	-8	2	-8	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGCATCACATCTTAAT	2286	False	NA	137	True	AATAAA	-21	NA	69230922	69233542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69230900_69233500
ES.7696.3	chr12	+	2476	2	Genic_Genomic	ENSMUSG00000043998.11	novel	2614	1	NA	NA	0	-60	multi-exon	FALSE	non_canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATCATTTTGCAGAATCT	2294	False	NA	79	True	AATAAA	-25	NA	69230930	69233484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69232952_69233029
ES.7696.4	chr12	+	1909	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	18	687	18	-687	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGCTTTAATACATAAAC	2312	False	NA	NA	False	AATAAA	-16	NA	69230948	69232857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69230900_69232900
ES.7696.5	chr12	+	2366	2	Genic_Genomic	ENSMUSG00000043998.11	novel	2614	1	NA	NA	36	-68	multi-exon	FALSE	non_canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCCCTAATCATTTTG	2330	False	NA	71	True	AATAAA	-17	NA	69230966	69233476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69231266_69231409
ES.7696.7	chr12	+	1630	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	55	929	55	-929	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACAATACCTGTTTCC	2349	False	NA	NA	False	ATTAAA	-5	NA	69230985	69232615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69231000_69232600
ES.7697.1	chr12	+	2710	1	Genic_Genomic	ENSMUSG00000097061.3	novel	NA	NA	NA	NA	-52	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGTATATGTGCATGC	2061	False	NA	NA	False	AATAAA	-22	NA	69243932	69246642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69243900_69246600
ES.7697.2	chr12	+	2531	2	NNC	ENSMUSG00000097061.3	novel	2545	2	NA	NA	-32	1797	intron_retention	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAAACATGTCTGT	2081	False	NA	NA	False	NA	NA	NA	69243952	69248438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69246313_69248267
ES.7698.1	chr12	+	176	1	Intergenic	novelGene_6345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCTAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	69273480	69273656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69273500_69273700
ES.7699.1	chr12	+	326	3	NNC	ENSMUSG00000113190.2	novel	523	2	NA	NA	20	-6406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTAGACATTCATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	69274719	69278652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69274771_69276405_69276501_69278472
ES.77.1	chr1	+	1581	10	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-6	-34	combination_of_known_junctions	TRUE	canonical	3	10	junction_9	7.71402442564879	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9978856	9991457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9991052
ES.77.10	chr1	+	2489	13	NIC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	-4	-6	intron_retention	FALSE	canonical	1	3	junction_11	9.85837207656518	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGCCTTGGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	9978888	10011173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10007220_10007331_10010602
ES.77.11	chr1	+	1323	9	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	10.8793094909558	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9978889	9991459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9990760_9990898_9991052
ES.77.12	chr1	+	2559	14	NIC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	-2	-39	intron_retention	FALSE	canonical	2	3	junction_11	9.78708241758087	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAGGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	9978890	10011140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
ES.77.13	chr1	+	5332	3	NIC	ENSMUSG00000046101.17	novel	2003	14	NA	NA	0	-3870	intron_retention	FALSE	canonical	3	23	junction_2	7.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATAATAAAAGT	NA	False	NA	NA	False	NA	NA	NA	9978892	9987621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9982038_9982134_9982399_9985698
ES.77.14	chr1	+	1344	10	NNC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	3	7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	8.26116902019605	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGTTGTGAATTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	9978897	9992757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9992548
ES.77.15	chr1	+	2467	14	ISM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	3034	36	358	-36	3prime_fragment	FALSE	canonical	2	3	junction_11	9.49493792259045	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	9981896	10011143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
ES.77.16	chr1	+	1003	7	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	771	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.68962790249909	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAACATTATTTTTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	9982309	9992747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9982399_9985698_9985895_9986540_9986591_9986774_9986880_9989244_9989371_9990659_9990898_9992548
ES.77.17	chr1	+	4392	4	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	5253	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.76029781788188	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAACATTATTTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	9986791	9992746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9989126_9989244_9989371_9990659_9990898_9991052
ES.77.18	chr1	+	4317	4	NNC	ENSMUSG00000046101.17	novel	3249	16	NA	NA	-1242	-2254	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.86744175568088	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACTAAAGATCCTGAG	NA	False	NA	NA	False	AAAAAG	-11	NA	10001102	10008423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10001173_10002226_10002407_10004147_10004414_10004622
ES.77.19	chr1	+	176	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATATATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10004418	10004594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10004400_10004600
ES.77.2	chr1	+	1812	8	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-6	-7	intron_retention	FALSE	canonical	0	0	junction_7	10.965623464226	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGAAGTTTTTGACAAAT	NA	False	NA	NA	False	NA	NA	NA	9978856	9991484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9978916_9981899_9982038_9982134_9982399_9985698_9985895_9986540_9986880_9989244_9989371_9990659_9990898_9991032
ES.77.3	chr1	+	1556	8	NNC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	7	junction_7	9.13168960828394	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAACATTATTTTTTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	9978859	9992747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9978916_9981899_9982038_9982134_9982399_9985698_9985895_9986540_9986880_9989244_9989371_9990659_9990898_9992548
ES.77.4	chr1	+	2438	12	NNC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	-3	-39	intron_retention	FALSE	canonical	1	1	junction_10	11.0767420695813	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAGGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	9978859	10011140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_9978916_9981899_9982038_9982134_9982266_9985698_9985895_9986540_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10007207_10007331_10010602
ES.77.5	chr1	+	4293	10	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	-3	1422	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	7.71402442564879	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTACTGCTTGATAGAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	9978859	9994172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9991052
ES.77.6	chr1	+	2554	15	FSM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	-3	2	-3	-2	multi-exon	FALSE	canonical	2	3	junction_12	9.43857694220254	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTGGTAAATGTATGA	NA	False	NA	NA	False	NA	NA	NA	9978859	10011177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
ES.77.7	chr1	+	3030	9	ISM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	0	18422	0	7	5prime_fragment	FALSE	canonical	3	16	junction_7	6.88748865697795	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGTTGTGAATTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	9978862	9992757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659
ES.77.8	chr1	+	2813	9	NIC	ENSMUSG00000046101.17	novel	2826	10	NA	NA	3	8	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	10.2439006242739	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGTTGTGAATTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	9978865	9992758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982266_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9991052
ES.77.9	chr1	+	2586	12	NIC	ENSMUSG00000046101.17	novel	2553	15	NA	NA	3	-5	intron_retention	FALSE	canonical	1	3	junction_10	10.29402458462	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGCCTTGGTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	9978865	10011174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_9978916_9981899_9982038_9982134_9982399_9985698_9985895_9986540_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10007220_10007331_10010602
ES.770.1	chr1	+	179	1	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATTTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	74867087	74867266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74867100_74867300
ES.7700.1	chr12	+	2620	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	21	-21	21	21	multi-exon	FALSE	canonical	1	2	junction_6	3.37474278855276	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTTATCATTTTTAGT	NA	False	NA	NA	False	AATAAA	-37	NA	69288626	69331427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
ES.7700.2	chr12	+	276	2	FSM	ENSMUSG00000051890.14	ENSMUST00000127791.2	228	2	-48	0	34	0	multi-exon	FALSE	canonical	3	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGTCCGAGTGGGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	69288639	69289416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69288788_69289288
ES.7700.3	chr12	+	5097	7	NIC	ENSMUSG00000051890.14	novel	2620	13	NA	NA	-20	18995	intron_retention	FALSE	canonical	2	7	junction_6	2.68741924943285	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69288667	69308411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69305402_69306274
ES.7700.4	chr12	+	3649	1	NIC	ENSMUSG00000051890.14	novel	2620	13	NA	NA	39066	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCAGTGTGAATTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	69327757	69331406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69327800_69331400
ES.7701.1	chr12	+	3404	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-395	-1104	-354	1104	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTATCATTAAGTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	69343100	69358565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.10	chr12	+	2835	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	21	-951	-12	951	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAACCTCTCGTGACTGGC	NA	False	NA	NA	False	NA	NA	NA	69343516	69358412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.11	chr12	+	1575	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	23	307	-10	-307	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCCTGGGTTTTATGT	NA	False	NA	-70	True	NA	NA	NA	69343518	69357154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.12	chr12	+	1640	13	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	-7	-224	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	166.350199545684	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCTGTCTATTGTTAA	NA	False	NA	13	True	AATAAA	-13	NA	69343521	69357237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354059_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.14	chr12	+	1448	12	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	148	-223	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	170.736808718096	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTGTCTATTGTTAAA	NA	False	NA	14	True	AATAAA	-14	NA	69343676	69357238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356926
ES.7701.15	chr12	+	7474	4	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	-1555	-222	intron_retention	FALSE	canonical	3	582	junction_1	45.38232646698	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGTCTATTGTTAAAG	NA	False	NA	15	True	AATAAA	-15	NA	69347619	69357239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69349216_69350307_69355820_69356760_69356814_69356926
ES.7701.16	chr12	+	175	1	Intergenic	novelGene_6348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69349601	69349776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69349600_69349800
ES.7701.2	chr12	+	1868	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	-160	197	-119	-197	multi-exon	FALSE	canonical	3	493	junction_10	56.6727937863977	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTGTGTTGGCTT	NA	False	NA	40	True	AATAAA	-40	NA	69343335	69357264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.3	chr12	+	1791	12	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	6	-223	intron_retention	FALSE	canonical	3	493	junction_9	58.3195812203672	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTGTCTATTGTTAAA	NA	False	NA	14	True	AATAAA	-14	NA	69343460	69357238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.4	chr12	+	3804	11	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	20	-224	intron_retention	FALSE	canonical	3	493	junction_8	60.6923388905058	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTACCTGTCTATTGTTAA	NA	False	NA	13	True	AATAAA	-13	NA	69343474	69357237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69343922_69346989_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.5	chr12	+	1572	14	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	-9	-220	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	164.575444471759	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTCTATTGTTAAAGTT	NA	False	NA	17	True	AATAAA	-17	NA	69343486	69357241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69343564_69343685_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ES.7701.6	chr12	+	1638	12	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	-6	-200	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	173.145665517804	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTACTGTGTTGG	NA	False	NA	37	True	AATAAA	-37	NA	69343489	69357261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69355731_69355820_69356760_69356814_69356926
ES.7701.7	chr12	+	2872	14	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	-4	1097	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	164.575444471759	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAGATGTGTATCATT	NA	False	NA	NA	False	AATAAA	-15	NA	69343491	69358558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926_69357984_69358117
ES.7701.8	chr12	+	2806	14	NNC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	8	1089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	164.575444471759	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACAATTACAGATGT	NA	False	NA	NA	False	AATAAA	-7	NA	69343503	69358550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926_69357938_69358117
ES.7701.9	chr12	+	5158	10	NIC	ENSMUSG00000020978.11	novel	1905	13	NA	NA	9	1096	intron_retention	FALSE	canonical	3	520	junction_4	44.6345932386557	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTACAGATGTGTATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	69343504	69358557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69351402_69352401_69352483_69352556_69352616_69353963_69355820_69356760_69356814_69356926
ES.7702.1	chr12	+	177	1	Intergenic	novelGene_6349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	69386854	69387031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69386900_69387000
ES.7703.1	chr12	+	156	1	Intergenic	novelGene_6350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69394540	69394696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69394500_69394700
ES.7704.1	chr12	+	210	1	Intergenic	novelGene_6352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTGCTGTTCTCCCT	NA	False	NA	NA	False	NA	NA	NA	69397259	69397469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69397300_69397500
ES.7705.1	chr12	+	173	1	Intergenic	novelGene_6353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAACCCTATTTACT	NA	False	NA	NA	False	NA	NA	NA	69398552	69398725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69398600_69398700
ES.7706.1	chr12	-	539	3	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	-30	12120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2666	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAACAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	69230817	69217384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69217435_69229511_69229940_69230756
ES.7706.10	chr12	-	3337	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	51	2	51	-2	multi-exon	FALSE	canonical	3	240	junction_2	19	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTGTTACCTACATTC	NA	False	NA	-10	True	AATAAA	-14	NA	69245152	69235862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69237169_69239581_69239726_69243265
ES.7706.101	chr12	-	3655	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	107.695213232381	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGAGGTTTCGTTTGGTT	NA	False	NA	-3	True	AATACA	-15	NA	69403931	69358425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359416_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371123_69371206_69371266_69371692_69371751_69373929_69374039_69374426_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.102	chr12	-	3531	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.9505556841042	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGAGGTTTCGTTTGGT	NA	False	NA	-4	True	AATACA	-14	NA	69403875	69358426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359237_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.103	chr12	-	5324	10	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-651	3	intron_retention	FALSE	non_canonical	0	0	junction_4	111.758116229694	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGAGGTTTCGTTTGG	1414	False	NA	-5	True	AATACA	-13	NA	69371077	69358427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69361900_69361950_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005
ES.7706.105	chr12	-	3709	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	81.6220994939697	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGAGGTTTCGTTTGG	NA	False	NA	-5	True	AATACA	-13	NA	69403938	69358427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.106	chr12	-	5066	13	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-2699	-47	intron_retention	FALSE	non_canonical	0	0	junction_5	98.1311480734951	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACGTAGTGGTCTACTG	NA	False	NA	-55	True	CATAAA	-3	NA	69373125	69358477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361900_69361950_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692
ES.7706.107	chr12	-	3842	4	NNC	ENSMUSG00000020982.10	novel	3909	4	NA	NA	65	-48	intron_retention	FALSE	non_canonical	0	0	junction_3	177.946309006084	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACGTAGTGGTCTACT	9856	False	NA	-56	True	CATAAA	-2	NA	69362635	69358478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69361900_69361950
ES.7706.108	chr12	-	6691	30	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	-52	intron_retention	FALSE	canonical	3	259	junction_6	33.4347999871146	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTGACGTAGTGGTC	NA	False	NA	-60	True	NA	NA	NA	69403921	69358482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.109	chr12	-	3514	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	-20	1238	-20	-103	multi-exon	FALSE	canonical	3	259	junction_6	33.0300526036517	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGTTTCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	69403959	69358533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.11	chr12	-	2586	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	51	753	51	-753	multi-exon	FALSE	canonical	3	240	junction_2	19	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGTTGTTTGTGTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	69245152	69236613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69237169_69239581_69239726_69243265
ES.7706.111	chr12	-	5453	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	23	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.1111383453464	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTCTACATTTTATTGA	NA	False	NA	NA	False	NA	NA	NA	69403885	69358556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69365749_69365924_69367197_69367300_69367364_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.112	chr12	-	3469	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	64.6287399183792	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTTCTACATTTTA	NA	False	NA	NA	False	NA	NA	NA	69403927	69358560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386571_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.113	chr12	-	3533	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	-169	intron_retention	FALSE	canonical	2	11	junction_3	79.1849479595123	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATATTTGTGAAAACT	NA	False	NA	NA	False	TATAAA	-16	NA	69403915	69358599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69359109_69359198_69359243_69359339_69359416_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.114	chr12	-	3433	23	NIC	ENSMUSG00000020982.10	novel	2370	20	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	69.645397586335	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATTGTCTTGCCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	69403937	69369380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69370671_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.115	chr12	-	3746	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	19	12090	3	-3	5prime_fragment	FALSE	canonical	3	279	junction_5	25.4414984085026	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTTTTATTGTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	69403920	69369385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.116	chr12	-	2045	22	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	17	13793	1	176	5prime_fragment	FALSE	canonical	3	279	junction_5	25.4414984085026	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCAGAGTGCAGGATG	NA	False	NA	NA	False	NA	NA	NA	69403922	69371088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.117	chr12	-	1246	11	ISM	ENSMUSG00000020982.10	ENSMUST00000222763.2	1340	14	-15	2894	-4	-2870	5prime_fragment	FALSE	canonical	3	286	junction_5	27.7757088118377	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGATTC	NA	False	NA	NA	False	NA	NA	NA	69403927	69390645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.118	chr12	-	2005	1	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	3929	3853	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACAAACAAACTTTGAT	5930	False	NA	NA	False	NA	NA	NA	69396914	69394909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69394900_69396900
ES.7706.119	chr12	-	195	1	Intergenic	novelGene_6351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGAAGCTTTAT	6879	False	NA	NA	False	NA	NA	NA	69395965	69395770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69395800_69396000
ES.7706.12	chr12	-	1214	2	NIC	ENSMUSG00000020973.8	novel	3390	3	NA	NA	1279	-753	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGTTGTTTGTGTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	69243924	69236613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69237169_69243265
ES.7706.120	chr12	-	2367	5	NIC	ENSMUSG00000020982.10	novel	1340	14	NA	NA	1	1	intron_retention	FALSE	canonical	3	296	junction_1	24.9537071394212	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTAATCTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	69403938	69398761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.13	chr12	-	1404	4	NNC	ENSMUSG00000020973.8	novel	3390	3	NA	NA	1292	-753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.887985929758	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGTTGTTTGTGTTT	NA	False	NA	-3	True	AGTAAA	-15	NA	69243911	69236613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69237169_69239581_69239726_69241915_69241975_69243265
ES.7706.14	chr12	-	1974	4	NNC	ENSMUSG00000020973.8	novel	3390	3	NA	NA	532	-754	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	123.075405973556	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACAGGTTGTTTGTGTT	NA	False	NA	-4	True	AGTAAA	-14	NA	69244671	69236614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69237169_69239581_69239726_69243265_69244344_69244473
ES.7706.17	chr12	-	3083	18	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	1	0	intron_retention	TRUE	canonical	3	369	junction_1	35.1647629543158	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274968	69248546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.18	chr12	-	1713	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	-11	4	-11	-4	multi-exon	FALSE	canonical	3	369	junction_1	34.9372011570955	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274980	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.19	chr12	-	1763	20	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	129.789495027104	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274947	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254355_69254439_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.2	chr12	-	2903	2	Genic_Genomic	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4175	133348	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGTGGGTACAGTTAT	NA	False	NA	NA	False	NA	NA	NA	69392771	69223947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_69224137_69390057
ES.7706.21	chr12	-	1514	18	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	103.432273948307	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274954	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.22	chr12	-	1508	18	NIC	ENSMUSG00000020974.7	novel	1641	19	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	103.19944073237	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274952	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.24	chr12	-	1261	1	NIC	ENSMUSG00000113786.2	novel	945	4	NA	NA	1230	-11938	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69249811	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248600_69249800
ES.7706.25	chr12	-	3917	17	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	1	-4	intron_retention	FALSE	canonical	2	6	junction_9	105.124331151261	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274968	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256802_69258146_69258220_69258996_69259046_69259760_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.27	chr12	-	3161	19	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	2	-4	intron_retention	FALSE	canonical	1	1	junction_4	133.319675226386	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCTACACATTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	69274967	69248550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254355_69254439_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.29	chr12	-	2459	18	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-10	-5	intron_retention	FALSE	canonical	2	6	junction_9	101.974554122984	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTTCTACACATTGT	NA	False	NA	-10	True	AATAAA	-15	NA	69274979	69248551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256802_69258146_69258220_69258996_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.3	chr12	-	3436	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	10	-2170	10	2163	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCCTGCCTCTGCCTCTC	NA	False	NA	NA	False	AATAAA	-22	NA	69230777	69227341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69227300_69230800
ES.7706.30	chr12	-	6366	15	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	369	junction_1	37.4081869245168	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTCTACACATTG	NA	False	NA	-11	True	AATAAA	-14	NA	69274958	69248552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69258220_69258996_69259046_69259760_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.31	chr12	-	3605	16	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	369	junction_1	37.4928733968944	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTCTACACATTG	NA	False	NA	-11	True	AATAAA	-14	NA	69274954	69248552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256769_69258146_69258220_69258996_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.32	chr12	-	2387	18	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	12	-6	intron_retention	FALSE	canonical	3	369	junction_1	35.9500807300661	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTCTACACATTG	NA	False	NA	-11	True	AATAAA	-14	NA	69274941	69248552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.34	chr12	-	3882	17	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	1	-6	intron_retention	FALSE	canonical	3	369	junction_1	36.8942216851094	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTTCTACACATTG	NA	False	NA	-11	True	AATAAA	-14	NA	69274968	69248552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.35	chr12	-	1661	19	NNC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	-3	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	100.53924054263	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACTTATGATAAACCT	NA	False	NA	-30	True	NA	NA	NA	69274956	69248571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256602_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.36	chr12	-	3468	13	NNC	ENSMUSG00000020974.7	novel	1641	19	NA	NA	4	3339	intron_retention	FALSE	canonical	3	25	junction_5	116.081748015018	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAAATTTGATTTTA	NA	False	NA	NA	False	NA	NA	NA	69274949	69254537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256737_69258146_69258220_69258996_69259046_69259760_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ES.7706.37	chr12	-	4975	2	Antisense	novelGene_ENSMUSG00000020978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGGTAAGTTAAGT	4384	False	NA	NA	False	NA	NA	NA	69357096	69260410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_69260593_69352303
ES.7706.38	chr12	-	4719	3	Antisense	novelGene_ENSMUSG00000020978.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGGTAAGTTAAGT	4384	False	NA	NA	False	NA	NA	NA	69357096	69260410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_69260593_69352303_69355158_69355413
ES.7706.39	chr12	-	177	2	Intergenic	novelGene_6343	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGGTAA	6025	False	NA	NA	False	NA	NA	NA	69316270	69260417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69260488_69316163
ES.7706.4	chr12	-	553	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	-21	-6	-21	3	multi-exon	FALSE	canonical	3	5332	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGTGTTTTGATTCTC	NA	False	NA	-2	True	AATAAA	-20	NA	69230878	69229508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69229940_69230756
ES.7706.40	chr12	-	159	2	Intergenic	novelGene_6344	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	6024	False	NA	NA	False	NA	NA	NA	69316271	69260436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69260540_69316215
ES.7706.41	chr12	-	421	3	ISM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	0	21186	0	-11856	5prime_fragment	FALSE	canonical	3	441	junction_2	40	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTTGTCTTCATCAT	NA	False	NA	NA	False	TATAAA	-11	NA	69274969	69269732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69269954_69273111_69273213_69274870
ES.7706.42	chr12	-	177	1	Intergenic	novelGene_6346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATATTTAAACATTT	6025	False	NA	NA	False	NA	NA	NA	69316270	69316093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69316100_69316300
ES.7706.43	chr12	-	218	1	Intergenic	novelGene_6347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTGTGAAGAGACGCC	NA	False	NA	NA	False	NA	NA	NA	69332802	69332584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69332600_69332800
ES.7706.44	chr12	-	5448	19	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	584	13	intron_retention	TRUE	non_canonical	0	0	junction_5	80.5384656201274	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACACAGTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	69387793	69357282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361900_69361950_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664
ES.7706.45	chr12	-	3950	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	2	780	2	266	multi-exon	FALSE	canonical	3	259	junction_6	33.0300526036517	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAGTATCTTGAC	NA	False	NA	NA	False	NA	NA	NA	69403937	69358075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.46	chr12	-	3988	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	0	265	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	96.4931947813858	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGCTCAAGTATCTTGA	NA	False	NA	NA	False	NA	NA	NA	69403916	69358076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400667_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.47	chr12	-	6575	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	264	intron_retention	FALSE	canonical	3	26	junction_19	61.6003702841689	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCTCAAGTATCTTG	NA	False	NA	NA	False	NA	NA	NA	69403927	69358077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.48	chr12	-	3908	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-5	260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	80.9573334772706	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACTGGGCTCAAGTAT	NA	False	NA	NA	False	NA	NA	NA	69403928	69358081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363206_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.49	chr12	-	3747	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	-34	1019	-34	27	multi-exon	FALSE	canonical	3	259	junction_6	33.0300526036517	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCCGTGTATTCATA	NA	False	NA	-3	True	AAGAAA	-7	NA	69403973	69358314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.5	chr12	-	752	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	-2	7	-2	0	multi-exon	FALSE	canonical	3	8	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230762	69229511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69229940_69230438
ES.7706.50	chr12	-	7515	32	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	25	intron_retention	FALSE	non_canonical	0	0	junction_4	119.440318126555	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	NA	False	NA	-5	True	AAGAAA	-5	NA	69403906	69358316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69361900_69361950_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400667_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.51	chr12	-	6047	31	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	25	intron_retention	FALSE	canonical	1	1	junction_27	99.410909305211	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	NA	False	NA	-5	True	AAGAAA	-5	NA	69403938	69358316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69371005_69371127_69371206_69371266_69371692_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400667_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.52	chr12	-	3650	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-1	25	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	96.3159211007398	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTTCCGTGTATTCA	NA	False	NA	-5	True	AAGAAA	-5	NA	69403909	69358316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363072_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.53	chr12	-	3707	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	63.9924235627742	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTTTCCGTGTATTC	NA	False	NA	-6	True	AAGAAA	-4	NA	69403927	69358317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363222_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.56	chr12	-	7182	32	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	3	22	intron_retention	FALSE	non_canonical	0	0	junction_4	64.7742578074479	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403920	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69361900_69361950_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.57	chr12	-	3434	32	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	97.62029053342	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403937	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363593_69364800_69364955_69367146_69367197_69367300_69367344_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.58	chr12	-	3664	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-5	22	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	64.7742578074479	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403928	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.59	chr12	-	3796	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	290	22	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_32	63.9381720394789	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403618	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403415
ES.7706.6	chr12	-	1300	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	-25	1	-25	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCCTTGTGTTTTGAT	NA	False	NA	-6	True	AATAAA	-16	NA	69230812	69229512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69229500_69230800
ES.7706.60	chr12	-	3603	31	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	22	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	66.192320803348	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403927	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.61	chr12	-	3670	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	64.4929441392622	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403937	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399116_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.62	chr12	-	4506	12	ISM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	29991	1024	-3522	22	intron_retention	FALSE	canonical	3	259	junction_6	41.8543322007046	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69373948	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005
ES.7706.64	chr12	-	6184	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	22	intron_retention	FALSE	canonical	3	259	junction_6	33.357022453005	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403937	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.65	chr12	-	3806	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	22	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	81.6220994939697	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTTTCCGTGTAT	NA	False	NA	-8	True	AAGAAA	-2	NA	69403927	69358319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.67	chr12	-	6312	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-5	0	intron_retention	FALSE	canonical	3	26	junction_19	61.6003702841689	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403928	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.7	chr12	-	572	2	NNC	ENSMUSG00000049751.7	novel	757	2	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCCTTGTGTTTTGAT	NA	False	NA	-6	True	AATAAA	-16	NA	69230783	69229512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69229940_69230638
ES.7706.70	chr12	-	1683	10	NIC	ENSMUSG00000020982.10	novel	2843	11	NA	NA	1464	0	intron_retention	FALSE	canonical	3	272	junction_8	37.7215267486208	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	3529	False	NA	-30	True	NA	NA	NA	69368962	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874
ES.7706.71	chr12	-	3673	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	64.1557476843463	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403956	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359411_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.72	chr12	-	3685	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	64.6250906672478	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403930	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388338_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.73	chr12	-	8867	29	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	86.0299173757215	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403928	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361900_69361950_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.74	chr12	-	3665	33	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_20	60.7050936778579	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403938	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.77	chr12	-	3753	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	96.2215457087749	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403915	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374426_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.78	chr12	-	12174	29	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	0	intron_retention	TRUE	non_canonical	0	0	junction_4	88.8273017760662	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403927	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69361900_69361950_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69370955_69370992_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.79	chr12	-	3750	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	81.6848858071655	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403937	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69359738_69359805_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.8	chr12	-	647	2	NNC	ENSMUSG00000049751.7	novel	757	2	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	0	384	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGCCTTGTGTTTTGA	NA	False	NA	-7	True	AATAAA	-15	NA	69230748	69229513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69229940_69230527
ES.7706.81	chr12	-	3537	32	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	64.503482631499	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403915	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402851_69403824
ES.7706.83	chr12	-	3721	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	94.1453168220411	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403928	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69359738_69359805_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.84	chr12	-	6417	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	0	intron_retention	FALSE	canonical	1	3	junction_26	108.039760476178	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403927	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371123_69371206_69371266_69371692_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.85	chr12	-	3629	33	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_29	64.4352191036664	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403932	69358341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400667_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.87	chr12	-	3606	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	19	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	83.6596469239352	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTTGCCAAATTTTAC	NA	False	NA	52	True	ATTAAA	-21	NA	69403889	69358370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371011_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402912_69403052_69403122_69403824
ES.7706.88	chr12	-	3590	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	6	-31	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	65.4678829997924	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACTTTGCCAAATTTT	NA	False	NA	50	True	ATTAAA	-19	NA	69403933	69358372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.89	chr12	-	1615	1	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1419	-31	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACTTTGCCAAATTTT	1493	False	NA	50	True	ATTAAA	-19	NA	69359987	69358372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358400_69360000
ES.7706.9	chr12	-	1135	2	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	69230762	69229514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69229940_69230052
ES.7706.90	chr12	-	5497	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	12	-31	intron_retention	FALSE	canonical	1	3	junction_26	95.23012834051	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACTTTGCCAAATTTT	NA	False	NA	50	True	ATTAAA	-19	NA	69403896	69358372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69397630_69397741_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.91	chr12	-	3513	33	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	-31	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	63.8405912703665	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACTTTGCCAAATTTT	NA	False	NA	50	True	ATTAAA	-19	NA	69403938	69358372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363072_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.93	chr12	-	3632	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	-25	1125	-25	10	multi-exon	FALSE	canonical	3	259	junction_6	33.0300526036517	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTCGTTTGGTTAATGG	NA	False	NA	2	True	AATACA	-20	NA	69403964	69358420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.97	chr12	-	3318	32	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	84.5709376580274	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTTCGTTTGGTTAAT	NA	False	NA	0	True	AATACA	-18	NA	69403921	69358422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69371005_69371127_69371206_69371266_69371692_69371751_69374426_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.98	chr12	-	3532	33	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	1	6	combination_of_known_junctions	FALSE	canonical	1	1	junction_29	81.1922631397229	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGGTTTCGTTTGGTTA	NA	False	NA	-2	True	AATACA	-16	NA	69403938	69358424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400667_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7706.99	chr12	-	3684	34	NNC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	-4	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	96.4393165749886	371	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGGTTTCGTTTGGTTA	NA	False	NA	-2	True	AATACA	-16	NA	69403927	69358424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69359738_69359805_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387878_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ES.7707.1	chr12	-	287	1	FSM	ENSMUSG00000118841.1	ENSMUST00000174924.4	300	1	4	9	4	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTCTTTTGGCTCTCTA	NA	False	NA	NA	False	NA	NA	NA	69408251	69407964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69408000_69408300
ES.7708.1	chr12	+	135	1	Intergenic	novelGene_6354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69413764	69413899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69413800_69413900
ES.7709.1	chr12	+	1668	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-130	-4	-130	4	multi-exon	FALSE	canonical	3	1327	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCGTTTGTCTTTTATA	NA	False	NA	34	True	AGTAAA	-23	NA	69418793	69420561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.10	chr12	+	3097	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-14	-1549	-14	1549	multi-exon	FALSE	canonical	3	1327	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAATAAGCACAAAGG	NA	False	NA	NA	False	CATAAA	-39	NA	69418909	69422106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.12	chr12	+	1306	2	Genic_Genomic	ENSMUSG00000044147.9	novel	1534	2	NA	NA	-14	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTGCCGTTTGTCT	NA	False	NA	28	True	AGTAAA	-17	NA	69418909	69420555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69418920_69419259
ES.7709.2	chr12	+	3832	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-100	-2198	-100	2198	multi-exon	FALSE	canonical	3	1327	junction_1	0	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGGTTATGTTACTTG	NA	False	NA	15	True	AATAAA	-18	NA	69418823	69422755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.3	chr12	+	3613	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-99	-1980	-99	1980	multi-exon	FALSE	canonical	3	1327	junction_1	0	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTTTAATTGCATCA	NA	False	NA	NA	False	ATTAAA	-13	NA	69418824	69422537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.4	chr12	+	1449	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-72	157	-72	-157	multi-exon	FALSE	canonical	3	1327	junction_1	0	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTTTTTATTTCGA	NA	False	NA	13	True	NA	NA	NA	69418851	69420400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.5	chr12	+	1557	2	NNC	ENSMUSG00000044147.9	novel	1534	2	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	0	655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTGCCGTTTGTCT	NA	False	NA	28	True	AGTAAA	-17	NA	69418856	69420555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69418956_69419097
ES.7709.6	chr12	+	2098	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	-27	-537	-27	537	multi-exon	FALSE	canonical	3	1327	junction_1	0	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATATGCCCCTTTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	69418896	69421094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69418998_69419097
ES.7709.7	chr12	+	1649	1	Genic_Genomic	ENSMUSG00000044147.9	novel	NA	NA	NA	NA	-17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTGCCGTTTGTCT	NA	False	NA	28	True	AGTAAA	-17	NA	69418906	69420555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_69418900_69420600
ES.7709.8	chr12	+	2483	3	NNC	ENSMUSG00000044147.9	novel	1534	2	NA	NA	-17	2196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	663.5	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGGTTATGTTACT	NA	False	NA	13	True	AATAAA	-16	NA	69418906	69422753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69418998_69419097_69421107_69422370
ES.7709.9	chr12	+	1681	3	NNC	ENSMUSG00000044147.9	novel	1534	2	NA	NA	-15	2196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	663.5	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGGTTATGTTACT	NA	False	NA	13	True	AATAAA	-16	NA	69418908	69422753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69418998_69419097_69420589_69422652
ES.771.1	chr1	-	218	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACAGTAGAGTTTT	6758	False	NA	NA	False	NA	NA	NA	74886358	74886140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74886100_74886400
ES.7710.1	chr12	-	2861	1	FSM	ENSMUSG00000052673.3	ENSMUST00000238276.2	1985	1	-53	-823	-53	823	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	69419295	69416434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69416400_69419300
ES.7710.2	chr12	-	2879	1	FSM	ENSMUSG00000052673.3	ENSMUST00000238276.2	1985	1	-810	-84	-810	84	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACATCTTATTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	69420052	69417173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69417200_69420100
ES.7711.1	chr12	+	212	1	Intergenic	novelGene_6355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATACTGATGTTTTA	856	False	NA	NA	False	AATAAA	-17	NA	69448566	69448778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69448600_69448800
ES.7712.1	chr12	-	198	1	Intergenic	novelGene_6356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTAATTTTTTAAAAA	6855	False	NA	NA	False	NA	NA	NA	69589965	69589767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69589800_69590000
ES.7713.1	chr12	+	185	1	Intergenic	novelGene_6357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAATGGCATGG	NA	False	NA	NA	False	NA	NA	NA	69592964	69593149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69593000_69593100
ES.7714.1	chr12	-	172	1	Intergenic	novelGene_6358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAATCCC	NA	False	NA	NA	False	NA	NA	NA	69619976	69619804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69619800_69620000
ES.7715.1	chr12	+	147	1	Antisense	novelGene_ENSMUSG00000049882.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTTAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	69627310	69627457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_69627300_69627500
ES.7716.1	chr12	-	1882	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	106	-1113	11	890	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGACTCTGCTTC	NA	False	NA	-10	True	AATAAA	-12	NA	69629778	69623511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
ES.7716.10	chr12	-	1911	5	NNC	ENSMUSG00000049882.11	novel	875	6	NA	NA	-16	-848	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	76.9366622618892	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACATGTCTCGGTTTT	NA	False	NA	NA	False	CATAAA	-12	NA	69629807	69625472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69626785_69627891_69628012_69629049_69629116_69629304_69629405_69629494
ES.7716.12	chr12	-	1900	5	ISM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	102	1072	7	-849	5prime_fragment	FALSE	canonical	3	142	junction_3	19.0656759649376	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCACATGTCTCGGTTT	NA	False	NA	NA	False	CATAAA	-11	NA	69629782	69625473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ES.7716.13	chr12	-	4002	1	FSM	ENSMUSG00000049882.11	ENSMUST00000238319.2	3340	1	-12	-650	-10	650	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCACTCTGCTTTCT	NA	False	NA	NA	False	AATGAA	-10	NA	69629801	69625799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69625800_69629800
ES.7716.2	chr12	-	1966	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	33	-890	33	890	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGACTCTGCTTC	NA	False	NA	-10	True	AATAAA	-12	NA	69629851	69623511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ES.7716.3	chr12	-	1074	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	33	2	33	-2	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGAAGCAGCATGGTT	NA	False	NA	-7	True	AATAAA	-22	NA	69629851	69624403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ES.7716.4	chr12	-	916	5	NIC	ENSMUSG00000049882.11	novel	875	6	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	68.3168171096985	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTCTGAAGCAGCATGG	NA	False	NA	-9	True	AATAAA	-20	NA	69629776	69624405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629304_69629405_69629494
ES.7716.5	chr12	-	734	6	NNC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	33	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	67.7625265172425	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629851	69624409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629400_69629823
ES.7716.6	chr12	-	1127	6	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	46	-8	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	61.6071424430642	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629838	69624409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ES.7716.7	chr12	-	1004	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238784.2	875	6	86	-215	-7	-8	multi-exon	FALSE	canonical	3	55	junction_4	48.4710222710435	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	False	NA	-13	True	AATAAA	-16	NA	69629798	69624409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629304_69629405_69629494
ES.7716.8	chr12	-	4221	2	NIC	ENSMUSG00000049882.11	novel	1109	6	NA	NA	13	-841	intron_retention	FALSE	canonical	3	159	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTCGGTTTTTAGTCAA	NA	False	NA	NA	False	CATAAA	-19	NA	69629776	69625465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69629405_69629494
ES.7716.9	chr12	-	1998	4	ISM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	100	1066	5	-843	intron_retention	FALSE	canonical	3	142	junction_3	21.3593591248011	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCGGTTTTTAGTC	NA	False	NA	NA	False	CATAAA	-17	NA	69629784	69625467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629293
ES.7717.1	chr12	+	3892	1	Antisense	novelGene_ENSMUSG00000034801.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAAAGTTATTTTAAGA	NA	False	NA	NA	False	AATATA	-41	NA	69639735	69643627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_69639700_69643600
ES.7718.1	chr12	+	191	1	Intergenic	novelGene_6359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAATAAAATA	NA	False	NA	NA	False	AATAAA	-45	NA	69698544	69698735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69698500_69698700
ES.7719.1	chr12	+	228	1	Intergenic	novelGene_6360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCGTATTATAGAGGT	NA	False	NA	NA	False	NA	NA	NA	69710594	69710822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69710600_69710800
ES.7719.2	chr12	+	383	1	Intergenic	novelGene_6361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69710596	69710979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69710600_69711000
ES.772.1	chr1	-	178	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	242	False	NA	NA	False	NA	NA	NA	74912805	74912627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_74912600_74912800
ES.7720.1	chr12	+	724	1	Intergenic	novelGene_6362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3672	False	NA	NA	False	NA	NA	NA	69728667	69729391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69728700_69729400
ES.7721.1	chr12	+	197	1	Intergenic	novelGene_6365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAGGAGGCAAGACTT	NA	False	NA	NA	False	NA	NA	NA	69761477	69761674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69761500_69761700
ES.7722.1	chr12	-	6081	23	NNC	ENSMUSG00000034801.14	novel	5607	23	NA	NA	-367	439	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_13	17.4730607290099	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTTTATGCATTCATAT	NA	False	NA	NA	False	ATTAAA	-24	NA	69728993	69630096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663963_69664284_69664829_69664955_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.11	chr12	-	7937	31	Fusion	ENSMUSG00000034801.14_ENSMUSG00000020988.10	novel	5607	23	NA	NA	41	0	intron_retention	FALSE	canonical	0	0	junction_22	208.112109210397	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTGCAATATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	69771606	69630539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69739164_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.12	chr12	-	5528	23	NNC	ENSMUSG00000034801.14	novel	5607	23	NA	NA	58	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	20.9256851147259	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTTGCAATATTGT	NA	False	NA	-6	True	AATAAA	-20	NA	69728557	69630540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657503_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664955_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704847_69728284
ES.7722.13	chr12	-	3723	6	ISM	ENSMUSG00000034801.14	ENSMUST00000035773.14	5607	23	83883	1	-1147	-1	3prime_fragment	FALSE	canonical	3	44	junction_4	12.0498962651137	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTTGCAATATTGT	NA	False	NA	-6	True	AATAAA	-20	NA	69644743	69630540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417
ES.7722.14	chr12	-	5597	23	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-326	-3	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_13	14.2318464910726	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAGATTTGCAATATT	NA	False	NA	-8	True	AATAAA	-18	NA	69728952	69630542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663963_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.15	chr12	-	5826	22	NIC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-347	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	15.1227779425082	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAAGATTTGCAATA	NA	False	NA	-10	True	AATAAA	-16	NA	69728973	69630544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69728288
ES.7722.17	chr12	-	5699	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-289	-898	-278	-189	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGCTTTGCCATTTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	69728904	69630728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.18	chr12	-	5416	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-178	-726	-167	-361	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTAAGTCTGGAACA	NA	False	NA	NA	False	TATAAA	-42	NA	69728793	69630900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.19	chr12	-	4944	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	8	-440	8	440	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAGAATGCACTGTG	NA	False	NA	NA	False	AATAGA	-4	NA	69728607	69631186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.2	chr12	-	6170	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-565	-1093	-554	2	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAATATTGTTTTTCAT	NA	False	NA	1	True	AATAAA	-27	NA	69729180	69630533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.20	chr12	-	3458	18	NIC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-288	1441	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	15.5599076682222	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCCGAAACTGCAAACA	NA	False	NA	NA	False	AAAAAG	-39	NA	69728914	69639738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69728288
ES.7722.22	chr12	-	4255	18	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	9	-839	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_8	14.3425709885137	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGTTGTGTTCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	69728606	69642018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663963_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.23	chr12	-	4779	18	ISM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-181	10394	-170	-841	5prime_fragment	FALSE	canonical	3	46	junction_1	6.90468974570393	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTTGTGTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	69728796	69642020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.24	chr12	-	7380	17	NNC	ENSMUSG00000034801.14	novel	5607	23	NA	NA	-298	-1878	intron_retention	TRUE	non_canonical	0	0	junction_11	18.9851915976637	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACATTTTGTCAGTTG	NA	False	NA	NA	False	NA	NA	NA	69728924	69643057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69664284_69664829_69664955_69673990_69674090_69678833_69680345_69680731_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.25	chr12	-	3529	18	ISM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	-75	11538	-64	-1985	5prime_fragment	FALSE	canonical	3	46	junction_1	6.90468974570393	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGTAATGACTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	69728690	69643164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.26	chr12	-	3632	2	Genic_Genomic	ENSMUSG00000034801.14	novel	5607	23	NA	NA	-250	2424	multi-exon	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATGTCAGGGCCCTGG	NA	False	NA	NA	False	NA	NA	NA	69664143	69658795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_69660405_69662120
ES.7722.27	chr12	-	3216	6	NNC	ENSMUSG00000034801.14	novel	5607	23	NA	NA	-113	-23332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.5530485744167	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAATTGGTTAATGTC	NA	False	NA	NA	False	AATAAA	-7	NA	69728739	69684551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69686687_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.28	chr12	-	236	1	Intergenic	novelGene_6363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGACATGGGGGTGGGG	NA	False	NA	NA	False	NA	NA	NA	69733220	69732984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69733000_69733200
ES.7722.29	chr12	-	3371	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	-31	0	-31	0	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771678	69737206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.3	chr12	-	3972	24	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.2986152336918	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAATATTGTTTTTCAT	NA	False	NA	1	True	AATAAA	-27	NA	69728599	69630533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69630734_69632343_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657503_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.30	chr12	-	4686	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	-22	0	intron_retention	FALSE	canonical	3	442	junction_4	59.9404652551179	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771669	69737206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.31	chr12	-	3286	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_5	166.433689016095	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771635	69737206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753939_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.33	chr12	-	3386	11	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	210.824951085017	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	-1	True	AATAAA	-33	NA	69771637	69737207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753205_69753263_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.34	chr12	-	5335	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.66044520355	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	-1	True	AATAAA	-33	NA	69771604	69737207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69741310_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.35	chr12	-	3152	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	-11	-1	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTGTTATGATCATAT	NA	False	NA	-1	True	AATAAA	-33	NA	69771658	69737207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.36	chr12	-	4718	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	-41	-2	intron_retention	TRUE	canonical	0	0	junction_5	225.893288474398	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGGTGTTATGATCATA	NA	False	NA	-2	True	AATAAA	-32	NA	69771588	69737208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69755809_69755925_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.37	chr12	-	3336	10	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	10	-11	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	167.09330578903	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATGTTTCTTGGTGTT	NA	False	NA	-11	True	AATAAA	-23	NA	69771637	69737217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768985_69771427
ES.7722.39	chr12	-	3115	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	45	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	183.444090597108	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTAATGTTTCTT	NA	False	NA	-17	True	AATAAA	-17	NA	69771602	69737223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.4	chr12	-	5786	23	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-179	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	14.6866020914211	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	-1	True	AATAAA	-25	NA	69728805	69630535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657503_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.40	chr12	-	3392	11	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	46	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	214.318198014074	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTTAATGTTTCTT	NA	False	NA	-17	True	AATAAA	-17	NA	69771601	69737223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69755809_69755925_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.44	chr12	-	3384	11	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	35	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	213.846112894296	441	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATATTTTAATGTTT	NA	False	NA	-20	True	AATAAA	-14	NA	69771612	69737226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69746636_69746736_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.45	chr12	-	3103	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	27	210	27	-210	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAGAAGCAATCCTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	69771620	69737416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.46	chr12	-	3210	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	10	-1444	intron_retention	FALSE	canonical	3	442	junction_4	59.9404652551179	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAGAAGAAAGTCAGTC	NA	False	NA	NA	False	AATAAA	-22	NA	69771637	69738650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.47	chr12	-	1740	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	-7	-1444	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	183.444090597108	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAGAAGAAAGTCAGTC	NA	False	NA	NA	False	AATAAA	-22	NA	69771654	69738650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.48	chr12	-	1864	9	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	24	-1448	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	183.285595110472	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGCATAGAAGAAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	69771623	69738654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749176_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.49	chr12	-	1903	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	-11	1448	-11	-1448	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGCATAGAAGAAAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	69771658	69738654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.5	chr12	-	5880	24	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	-201	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	18.1698560064957	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	-1	True	AATAAA	-25	NA	69728827	69630535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69674287_69674353_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.50	chr12	-	1589	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	23	1728	23	-1728	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATAGTAGATATAATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	69771624	69738934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.51	chr12	-	2908	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	27	-1729	intron_retention	FALSE	canonical	3	442	junction_4	59.9404652551179	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATATAGTAGATATAATAA	NA	False	NA	NA	False	AATAAA	-17	NA	69771620	69738935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.52	chr12	-	3039	9	ISM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	52	7238	-48	-7238	5prime_fragment	FALSE	canonical	3	420	junction_4	65.7761354900088	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGAGATCAATAGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	69771595	69744444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ES.7722.53	chr12	-	3744	3	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	15135	-7816	intron_retention	FALSE	canonical	3	442	junction_2	18.5	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTAGAATGTCTTA	4834	False	NA	NA	False	TATAAA	-31	NA	69753826	69745022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69746392_69748057_69749145_69752538
ES.7722.54	chr12	-	135	1	Intergenic	novelGene_6364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAACAAAAAAA	7687	False	NA	NA	False	NA	NA	NA	69750973	69750838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69750800_69751000
ES.7722.55	chr12	-	659	3	ISM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	10	30698	10	-8410	5prime_fragment	FALSE	canonical	3	564	junction_2	31.5	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTATGCAGTTTAGAT	NA	False	NA	NA	False	ATTAAA	-19	NA	69771637	69767904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69768238_69768851_69768968_69771427
ES.7722.6	chr12	-	5600	23	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	14.8401955835723	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	-1	True	AATAAA	-25	NA	69728614	69630535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704847_69728284
ES.7722.7	chr12	-	5679	24	NNC	ENSMUSG00000034801.14	novel	4512	23	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	18.423294205331	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCAATATTGTTTTTC	NA	False	NA	-1	True	AATAAA	-25	NA	69728612	69630535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69654710_69654790_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ES.7722.8	chr12	-	2834	11	NNC	ENSMUSG00000034801.14	novel	5607	23	NA	NA	9915	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1858443305902	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTGCAATATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	69653978	69630539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69632191_69632343_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963
ES.7723.1	chr12	+	1604	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-2	-3	-2	3	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTAGTCTTTACTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	69771721	69791437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.10	chr12	+	1504	1	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	3	-11516	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGCTACACAAGTATAAC	NA	False	NA	NA	False	NA	NA	NA	69771738	69773242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69771700_69773200
ES.7723.11	chr12	+	2288	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-8	275	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGGTAGACTGTCGT	NA	False	NA	NA	False	AATAAA	-15	NA	69771749	69791709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.12	chr12	+	802	5	NNC	ENSMUSG00000054894.7	novel	1485	5	NA	NA	-8	-1159	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	84.6788049041789	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACAAAACTAAAAA	NA	False	NA	NA	False	TATAAA	-25	NA	69771749	69790273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790002
ES.7723.13	chr12	+	1664	6	NNC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.8264278720682	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69771751	69791432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69771789_69772228_69772374_69784674_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.15	chr12	+	529	4	NIC	ENSMUSG00000054894.7	novel	1485	5	NA	NA	-4	-827	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	90.3487071788462	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGTGTCTGGTGTCA	NA	False	NA	NA	False	ATTAAA	-9	NA	69771753	69790605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69771789_69787672_69787882_69788418_69788591_69790492
ES.7723.16	chr12	+	2012	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-4	3	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTAGTCTTTACTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	69771753	69791437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.17	chr12	+	272	1	Intergenic	novelGene_6367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	69780960	69781232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69781000_69781200
ES.7723.18	chr12	+	3353	4	ISM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	11068	0	11040	0	3prime_fragment	FALSE	canonical	3	176	junction_3	21.7715410570772	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69782803	69791432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.19	chr12	+	2233	4	ISM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	11361	827	11333	-827	3prime_fragment	FALSE	canonical	3	176	junction_3	21.7715410570772	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGTGTCTGGTGTCA	NA	False	NA	NA	False	ATTAAA	-9	NA	69783096	69790605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.2	chr12	+	1211	5	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-1	-827	intron_retention	FALSE	canonical	3	110	junction_1	42.1270400099509	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGTGTCTGGTGTCA	NA	False	NA	NA	False	ATTAAA	-9	NA	69771722	69790605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.3	chr12	+	902	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-13	596	-1	-596	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATTTCTCATTGAGAT	NA	False	NA	NA	False	AATACA	-19	NA	69771722	69790836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.4	chr12	+	771	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	-1	829	-1	-827	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGTGTCTGGTGTCA	NA	False	NA	NA	False	ATTAAA	-9	NA	69771722	69790605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.5	chr12	+	1502	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-12	-5	0	3	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTAGTCTTTACTTTCT	NA	False	NA	7	True	AATAAA	-19	NA	69771723	69791437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.6	chr12	+	673	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-9	821	3	-821	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTGGTGTCACTATTA	NA	False	NA	NA	False	ATTAAA	-15	NA	69771726	69790611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7723.8	chr12	+	1495	5	NNC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	-4	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	72.0763484091696	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAAATAGCTGCAATT	NA	False	NA	23	True	AATAAA	-35	NA	69771731	69791453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69771789_69772228_69772329_69787672_69787882_69788422_69788591_69790492
ES.7723.9	chr12	+	2708	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	-2	-1221	-2	1219	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAATGCTCAGCAATAT	NA	False	NA	NA	False	NA	NA	NA	69771733	69792653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ES.7724.1	chr12	-	178	1	Intergenic	novelGene_6366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAGAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	69779801	69779623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69779600_69779800
ES.7725.1	chr12	+	156	1	Intergenic	novelGene_6368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAACAACGTCCTT	NA	False	NA	NA	False	NA	NA	NA	69815289	69815445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69815300_69815400
ES.7726.1	chr12	+	236	1	Intergenic	novelGene_6369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTATTTTTTGA	1142	False	NA	NA	False	NA	NA	NA	69844824	69845060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69844800_69845100
ES.7727.1	chr12	-	174	1	Intergenic	novelGene_6370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	69849359	69849185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69849200_69849400
ES.7728.1	chr12	+	198	1	Intergenic	novelGene_6371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTGTTCCATAGTTGC	NA	False	NA	NA	False	NA	NA	NA	69869992	69870190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69870000_69870200
ES.7729.1	chr12	+	196	1	Intergenic	novelGene_6372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACAACTCATTT	4750	False	NA	NA	False	AATATA	-3	NA	69897998	69898194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69898000_69898200
ES.773.1	chr1	+	175	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTATGGATACC	NA	False	NA	NA	False	NA	NA	NA	74958870	74959045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74958900_74959000
ES.7730.1	chr12	+	5587	1	Intergenic	novelGene_6373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAGAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	69926088	69931675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69926100_69931700
ES.7731.1	chr12	+	6997	13	ISM	ENSMUSG00000021066.10	ENSMUST00000021466.10	5150	15	-495	2388	-4	3	intron_retention	FALSE	canonical	1	5	junction_5	4.39933707127184	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	8479	False	NA	10	True	ATTAAA	-24	NA	69939383	70010803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814
ES.7731.10	chr12	+	3515	13	Fusion	ENSMUSG00000079076.3_ENSMUSG00000021066.10	novel	815	6	NA	NA	8168	-7	intron_retention	FALSE	canonical	0	0	junction_1	7.1278015934477	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATTAAACCAAATGCTC	NA	False	NA	0	True	ATTAAA	-14	NA	69962673	70010793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_69962792_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992988_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70007337_70010001
ES.7731.11	chr12	+	214	1	Intergenic	novelGene_6377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGATCAGAGGATA	NA	False	NA	NA	False	AATAAA	-6	NA	69978026	69978240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69978000_69978200
ES.7731.12	chr12	+	1876	8	Fusion	ENSMUSG00000079076.3_ENSMUSG00000021066.10	novel	815	6	NA	NA	-5718	0	multi-exon	FALSE	canonical	0	0	junction_1	8.58332507759989	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGCTCACTGGCT	26	False	NA	7	True	ATTAAA	-21	NA	69987232	70010800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_69987373_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.13	chr12	+	1641	7	NIC	ENSMUSG00000021066.10	novel	6025	14	NA	NA	115	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	6.15539510420646	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGCTCACTGGCT	5859	False	NA	7	True	ATTAAA	-21	NA	69993065	70010800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006247_70010001
ES.7731.14	chr12	+	6857	2	Fusion	ENSMUSG00000079076.3_ENSMUSG00000021066.10	novel	620	3	NA	NA	-4886	3	intron_retention	FALSE	canonical	3	15	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	NA	False	NA	10	True	ATTAAA	-24	NA	70000293	70010803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_70002162_70005814
ES.7731.2	chr12	+	3285	14	NNC	ENSMUSG00000021066.10	novel	6025	14	NA	NA	30	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	6.45879062451795	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCAAATGCTCACTGGC	8513	False	NA	6	True	ATTAAA	-20	NA	69939417	70010799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981578_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.3	chr12	+	5755	13	NIC	ENSMUSG00000021066.10	novel	6025	14	NA	NA	42	-2	intron_retention	FALSE	canonical	0	0	junction_12	5.42115198909686	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACCAAATGCTCACTGG	8525	False	NA	5	True	ATTAAA	-19	NA	69939429	70010798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.4	chr12	+	3211	14	NIC	ENSMUSG00000021066.10	novel	5150	15	NA	NA	43	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	5.77179430224741	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	8526	False	NA	10	True	ATTAAA	-24	NA	69939430	70010803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.5	chr12	+	2941	13	NIC	ENSMUSG00000021066.10	novel	6025	14	NA	NA	-227	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	6.70147164600599	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTCACTGGCTCTAGA	8747	False	NA	12	True	ATTAAA	-26	NA	69939651	70010805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.6	chr12	+	2947	14	NNC	ENSMUSG00000021066.10	novel	5150	15	NA	NA	-197	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	5.77179430224741	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGCTCACTGGCT	8777	False	NA	7	True	ATTAAA	-21	NA	69939681	70010800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006253_70010001
ES.7731.7	chr12	+	11114	11	NIC	ENSMUSG00000021066.10	novel	6025	14	NA	NA	90	3	intron_retention	FALSE	canonical	2	11	junction_2	3.57910603363466	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATGCTCACTGGCTCTA	9064	False	NA	10	True	ATTAAA	-24	NA	69939968	70010803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814
ES.7731.8	chr12	+	2591	14	NNC	ENSMUSG00000021066.10	novel	5150	15	NA	NA	163	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	6.81192827794783	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTCACTGGCTCTAGA	9137	False	NA	12	True	ATTAAA	-26	NA	69940041	70010805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993084_69994235_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ES.7731.9	chr12	+	3098	1	Intergenic	novelGene_6375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4610	False	NA	NA	False	NA	NA	NA	69950791	69953889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_69950800_69953900
ES.7732.1	chr12	-	4652	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-160	-3	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTTGTTCTTTAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	69940134	69850526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.11	chr12	-	4441	30	NIC	ENSMUSG00000034761.16	novel	4452	31	NA	NA	33	0	intron_retention	FALSE	canonical	1	42	junction_9	20.6085767675804	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAAGTATTTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69939844	69850532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.16	chr12	-	4237	30	NNC	ENSMUSG00000034761.16	novel	4452	31	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	34.8616767261948	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTATAAAGTATTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	69939824	69850534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856075_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.17	chr12	-	1625	1	NIC	ENSMUSG00000034761.16	novel	4250	32	NA	NA	13068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTATAAAGTATTTGTT	NA	False	NA	NA	False	AATAAA	-13	NA	69852159	69850534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69850500_69852200
ES.7732.19	chr12	-	4419	31	NNC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	38.5313148260246	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACTATAAAGTATTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	69939894	69850535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862524_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892599_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.2	chr12	-	4373	31	NNC	ENSMUSG00000034761.16	novel	4343	31	NA	NA	45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.0994061715839	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939832	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69867066_69867152_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69939426
ES.7732.23	chr12	-	4505	31	NNC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.8978424273713	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGAACTATAAAGTATT	NA	False	NA	NA	False	AATAAA	-9	NA	69939889	69850538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69862953_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.24	chr12	-	4113	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	4	-330	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGAATTGATGTGTTT	NA	False	NA	NA	False	AAAAAG	-44	NA	69939933	69850864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.26	chr12	-	3265	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	16	-1166	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAGTTTACTGAGCAT	NA	False	NA	88	True	TTTAAA	-19	NA	69939921	69851700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.27	chr12	-	3080	29	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	1	-1262	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	27.6275335896076	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCCTCTAGTTCCAA	NA	False	NA	-8	True	AATAAA	-12	NA	69939973	69851796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.28	chr12	-	3588	30	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-16	-1262	intron_retention	FALSE	canonical	1	42	junction_9	20.6726941972873	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCCTCTAGTTCCAA	NA	False	NA	-8	True	AATAAA	-12	NA	69939913	69851796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903638_69921050_69921109_69939426
ES.7732.29	chr12	-	2478	27	NNC	ENSMUSG00000034761.16	novel	4343	31	NA	NA	3942	-1262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	32.8476175137766	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCCTCTAGTTCCAA	NA	False	NA	-8	True	AATAAA	-12	NA	69899256	69851796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899182
ES.7732.3	chr12	-	4382	32	NNC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-43	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.6286969552142	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939826	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859429_69859472_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.30	chr12	-	1664	2	ISM	ENSMUSG00000034761.16	ENSMUST00000126584.2	4249	8	9732	1451	9732	-1451	3prime_fragment	FALSE	canonical	3	147	junction_1	0	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGTGTGTTAAGG	NA	False	NA	NA	False	AATGAA	-13	NA	69855495	69851985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69852126_69853971
ES.7732.31	chr12	-	177	2	Antisense	novelGene_ENSMUSG00002075260.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	69991454	69858241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_69858274_69991309
ES.7732.32	chr12	-	1877	9	ISM	ENSMUSG00000034761.16	ENSMUST00000110567.8	4250	32	166	40811	166	313	5prime_fragment	FALSE	canonical	3	118	junction_8	10.5	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTCCATGTCCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	69939617	69891334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.33	chr12	-	6017	1	Intergenic	novelGene_6374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAAGTTTCACTTCT	NA	False	NA	NA	False	NA	NA	NA	69938582	69932565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69932600_69938600
ES.7732.34	chr12	-	189	1	Intergenic	novelGene_6376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTCCAAACCTTG	NA	False	NA	NA	False	NA	NA	NA	69963144	69962955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69963000_69963100
ES.7732.35	chr12	-	193	1	Intergenic	novelGene_6378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGAAAATCGCATATAAT	NA	False	NA	NA	False	NA	NA	NA	69991456	69991263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_69991300_69991500
ES.7732.5	chr12	-	6279	30	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-24	2	intron_retention	FALSE	canonical	1	42	junction_8	20.2988375574345	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939807	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.6	chr12	-	4396	30	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	-3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	31.5917778553508	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939940	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69939426
ES.7732.7	chr12	-	4339	31	NNC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	34	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	31.0755352148421	220	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939843	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888793_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ES.7732.8	chr12	-	4289	31	NNC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	385	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	31.0761788012762	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAAGTATTTGTTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	69939398	69850530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939049
ES.7732.9	chr12	-	5387	9	NIC	ENSMUSG00000034761.16	novel	4334	30	NA	NA	-450	0	intron_retention	FALSE	canonical	0	0	junction_8	48.2590665056837	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAAGTATTTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69866081	69850532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69865582
ES.7733.1	chr12	-	3373	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-80	-769	-80	769	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGGAAAGTACCTAATA	NA	False	NA	NA	False	AATAAA	-18	NA	70033856	70011016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
ES.7733.10	chr12	-	2303	1	NIC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	91	7623	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTTTTGTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	70024566	70022263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70022300_70024600
ES.7733.11	chr12	-	4189	1	FSM	ENSMUSG00000021067.9	ENSMUST00000222827.2	1145	1	1003	-4047	1003	4047	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTGATTTTCTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	70030028	70025839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70025800_70030000
ES.7733.2	chr12	-	2727	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-200	-3	-200	3	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCTTGAATGCATGT	NA	False	NA	-11	True	ATTAAA	-20	NA	70033976	70011782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
ES.7733.3	chr12	-	2569	5	NNC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-77	3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	63.8337684928596	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCCTTGAATGCATGT	NA	False	NA	-11	True	ATTAAA	-20	NA	70033853	70011782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033482
ES.7733.4	chr12	-	3460	2	ISM	ENSMUSG00000021067.9	ENSMUST00000220735.2	3360	3	6690	-36	6690	0	3prime_fragment	FALSE	canonical	3	149	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	-14	True	ATTAAA	-17	NA	70017967	70011785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_70013122_70015843
ES.7733.5	chr12	-	2181	6	NNC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1975944520046	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCTGGTCCTTGAA	NA	False	NA	-18	True	ATTAAA	-13	NA	70033804	70011789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70012584_70012950_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
ES.7733.6	chr12	-	2469	4	NIC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-220	-4	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	65.576079649688	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTCTGGTCCTTGAA	NA	False	NA	-18	True	ATTAAA	-13	NA	70033996	70011789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70013122_70015843_70015988_70030982_70031427_70033447
ES.7733.7	chr12	-	1602	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-105	1027	-105	-991	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTAGTTTTACATAT	NA	False	NA	NA	False	AATAAA	-24	NA	70033881	70012812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
ES.7733.8	chr12	-	3849	3	FSM	ENSMUSG00000021067.9	ENSMUST00000220735.2	3360	3	-1486	997	-1486	-997	multi-exon	FALSE	canonical	3	149	junction_1	1	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATAAAATTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	70026143	70012818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70013122_70015843_70015988_70022741
ES.7733.9	chr12	-	2688	3	ISM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	-75	9387	-75	8714	5prime_fragment	FALSE	canonical	3	134	junction_2	5.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAATTTTTATGTTATC	NA	False	NA	NA	False	ATTAAA	-16	NA	70033851	70021172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_70023013_70030982_70031427_70033447
ES.7734.1	chr12	+	98	1	Intergenic	novelGene_6379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGGATAAAAAGGATCA	NA	False	NA	NA	False	NA	NA	NA	70086044	70086142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70086000_70086100
ES.7735.1	chr12	-	9832	30	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	-5	1	combination_of_known_junctions	TRUE	canonical	2	3	junction_29	10.7284058477154	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTTCTGCCTTGGA	NA	False	NA	-1	True	AATAAA	-18	NA	70158756	70058207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.11	chr12	-	9413	27	NNC	ENSMUSG00000021068.18	novel	9675	29	NA	NA	-14820	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_26	11.3893571206325	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCCTCTGGGTTTCT	872	False	NA	-9	True	AATAAA	-10	NA	70112878	70058215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70112704
ES.7735.12	chr12	-	7178	26	NNC	ENSMUSG00000021068.18	novel	9675	29	NA	NA	-11446	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.8243139335862	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCCTCTGGGTTTCT	4246	False	NA	-9	True	AATAAA	-10	NA	70109504	70058215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70061731_70062497_70062556_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462
ES.7735.13	chr12	-	6771	29	FSM	ENSMUSG00000021068.18	ENSMUST00000169074.2	6636	29	-106	-29	1	8	multi-exon	FALSE	canonical	2	3	junction_28	9.55188569907342	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTTTTTCTTCTGCC	NA	False	NA	NA	False	AATAAA	-25	NA	70158800	70065504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.14	chr12	-	6697	29	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_28	9.82467478819923	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70158761	70065512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.16	chr12	-	6543	30	NNC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	10.7206447354346	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70158792	70065512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092057_70092268_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.17	chr12	-	5046	29	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_27	9.95365536383699	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70158820	70065512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70157845_70158257_70158627
ES.7735.19	chr12	-	4616	28	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_27	9.24799314603341	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70158775	70065513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.2	chr12	-	7738	29	NIC	ENSMUSG00000021068.18	novel	9675	29	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	10.8088092379715	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTTTCTGCCTTGG	NA	False	NA	-2	True	AATAAA	-17	NA	70150085	70058208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70149928
ES.7735.20	chr12	-	7132	30	FSM	ENSMUSG00000021068.18	ENSMUST00000095666.13	7183	30	50	1	-8	0	multi-exon	FALSE	canonical	1	2	junction_28	9.93905327603093	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70158759	70065513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70157845_70158257_70158627
ES.7735.21	chr12	-	3535	21	NNC	ENSMUSG00000021068.18	novel	4723	29	NA	NA	-4662	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	10.6877266057848	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	9282	False	NA	NA	False	AATAAA	-16	NA	70102720	70065513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098019_70101161_70101337_70101604_70101746_70102080_70102218_70102645
ES.7735.22	chr12	-	4672	29	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	9.10791313269143	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70158811	70065513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.23	chr12	-	4158	25	NNC	ENSMUSG00000021068.18	novel	4723	29	NA	NA	-14820	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_24	10.180318702717	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTCTTCTTTGTTT	872	False	NA	NA	False	AATAAA	-15	NA	70112878	70065514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70112704
ES.7735.24	chr12	-	6739	30	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	9.39311863890614	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTCTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	70158758	70065514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.26	chr12	-	4613	28	NIC	ENSMUSG00000021068.18	novel	6636	29	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_27	9.55038619864191	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTCTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	70158800	70065514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ES.7735.27	chr12	-	4588	29	NNC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	10.265853841841	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTCTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	70158752	70065514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092361_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.29	chr12	-	4687	29	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	8.80949163443288	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGACTGTCTTCTTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70158801	70065515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.3	chr12	-	8196	30	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_28	10.8162690691155	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTTTCTGCCTTGG	NA	False	NA	-2	True	AATAAA	-17	NA	70158831	70058208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70157845_70158257_70158627
ES.7735.31	chr12	-	6754	30	FSM	ENSMUSG00000021068.18	ENSMUST00000021468.14	6708	30	-48	2	4	-2	multi-exon	FALSE	canonical	3	8	junction_13	9.12393202259383	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGACTGTCTTCTTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	70158747	70065515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.32	chr12	-	6808	29	NIC	ENSMUSG00000021068.18	novel	6636	29	NA	NA	-25	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	10.1101080960732	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATAAAATAAAATTTAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	70160516	70065536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066037_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70160247
ES.7735.34	chr12	-	3230	1	NIC	ENSMUSG00000021068.18	novel	9675	29	NA	NA	4000	-838	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGCCAATAACTCCAGT	4194	False	NA	NA	False	AAGAAA	-8	NA	70069601	70066371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70066400_70069600
ES.7735.4	chr12	-	10260	31	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_29	11.1413145045317	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTTTCTGCCTTGG	NA	False	NA	-2	True	AATAAA	-17	NA	70158801	70058208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70157845_70158257_70158627
ES.7735.5	chr12	-	7733	30	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	10.3268809844994	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGGTTTCTGCCTTGG	NA	False	NA	-2	True	AATAAA	-17	NA	70158759	70058208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.6	chr12	-	7271	26	NNC	ENSMUSG00000021068.18	novel	9675	29	NA	NA	-14820	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_25	11.4588655633968	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGGTTTCTGCCTTG	872	False	NA	-3	True	AATAAA	-16	NA	70112878	70058209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70112704
ES.7735.7	chr12	-	7800	30	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	10.1099778829774	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGGTTTCTGCCTTG	NA	False	NA	-3	True	AATAAA	-16	NA	70158800	70058209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7735.8	chr12	-	9920	31	NIC	ENSMUSG00000021068.18	novel	9919	30	NA	NA	1	-2	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	10.3	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGGGTTTCTGCCTT	NA	False	NA	-4	True	AATAAA	-15	NA	70158800	70058210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70061731_70064346_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ES.7736.1	chr12	+	162	1	Intergenic	novelGene_6380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAATATATATT	NA	False	NA	NA	False	NA	NA	NA	70190425	70190587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70190400_70190600
ES.7737.1	chr12	-	187	1	Intergenic	novelGene_6381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	70198816	70198629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70198600_70198800
ES.7738.1	chr12	+	178	1	Intergenic	novelGene_6382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAATGTGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	70266749	70266927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70266700_70266900
ES.7739.1	chr12	-	3710	18	NNC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	18	-4	intron_retention	FALSE	canonical	0	0	junction_11	5.89351881424339	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGCTTGGATTCCT	6218	False	NA	-4	True	AATAAA	-24	NA	70274439	70237588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70248132_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70269598_70269701_70274114
ES.7739.2	chr12	-	2847	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	-26	4	-26	-4	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTGCTTGGATTCCT	6174	False	NA	-4	True	AATAAA	-24	NA	70274483	70237588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ES.7739.3	chr12	-	4169	18	NIC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	30	2	intron_retention	FALSE	canonical	2	8	junction_15	3.84923485858421	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGCCTGCTTGGATTC	6230	False	NA	-6	True	AATAAA	-22	NA	70274427	70237590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70243887_70243991_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ES.7739.4	chr12	-	2901	19	NIC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	-34	0	intron_retention	FALSE	canonical	2	8	junction_16	3.74371901974032	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATAGCCTGCTTGGAT	6237	False	NA	-8	True	AATAAA	-20	NA	70274420	70237592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ES.7739.6	chr12	-	4054	19	NIC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	20	-2	intron_retention	FALSE	canonical	2	8	junction_16	4.03877808192796	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCAATAGCCTGCTTGG	6220	False	NA	-10	True	AATAAA	-18	NA	70274437	70237594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ES.774.1	chr1	+	155	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	74997209	74997364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_74997200_74997400
ES.7740.1	chr12	+	174	1	Intergenic	novelGene_6383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	70286800	70286974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70286800_70287000
ES.7741.1	chr12	-	177	1	Intergenic	novelGene_6384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAACACCAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	70457021	70456844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70456800_70457000
ES.7742.1	chr12	+	2204	8	NNC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	9	-417	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	183.18118609392	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGTTGAAGAGAAGTT	NA	False	NA	11	True	AATAAA	-17	NA	70499877	70514397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70499930_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.10	chr12	+	4209	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	19	-4	intron_retention	FALSE	canonical	3	450	junction_6	46.4746047738858	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGTTGGTGTTCTCA	NA	False	NA	9	True	ATTAAA	-12	NA	70499887	70514810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.11	chr12	+	2813	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	19	-416	intron_retention	FALSE	canonical	3	450	junction_6	48.7182945331856	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499887	70514398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.12	chr12	+	2790	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	20	-15	20	15	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCACATTGTATAATCC	NA	False	NA	28	True	ATTAAA	-31	NA	70499888	70514829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.13	chr12	+	3781	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	35	-416	intron_retention	FALSE	canonical	3	450	junction_6	46.4746047738858	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499903	70514398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.14	chr12	+	2297	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	35	-417	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	179.633886929313	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGTTGAAGAGAAGTT	NA	False	NA	11	True	AATAAA	-17	NA	70499903	70514397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507252_70507355_70511173_70511241_70512751
ES.7742.15	chr12	+	6166	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	43	-405	intron_retention	FALSE	canonical	3	450	junction_6	44.3236204899073	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTTTGATTTCTGTTA	NA	False	NA	23	True	AATAAA	-29	NA	70499911	70514409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70511241_70512751
ES.7742.16	chr12	+	2333	8	NNC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	43	-417	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	227.843752405468	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGTTGAAGAGAAGTT	NA	False	NA	11	True	AATAAA	-17	NA	70499911	70514397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507155_70507252_70507355_70511173_70511245_70512747
ES.7742.17	chr12	+	2057	9	NNC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	53	-781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	226.273030595783	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTAGTACTGTGTATC	NA	False	NA	NA	False	TTTAAA	-27	NA	70499921	70514033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70511848_70511945_70512751
ES.7742.19	chr12	+	1747	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	53	995	53	792	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTGGTATTTTATAT	NA	False	NA	NA	False	TTTAAA	-13	NA	70499921	70513819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.2	chr12	+	2740	7	NNC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	231.286258418725	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTGGTGTTCTCATA	NA	False	NA	11	True	ATTAAA	-14	NA	70499877	70514812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507252_70507355_70511173_70511241_70512749
ES.7742.22	chr12	+	5679	6	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	62	-2	intron_retention	FALSE	canonical	3	461	junction_5	44.2655622352185	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTGGTGTTCTCATA	NA	False	NA	11	True	ATTAAA	-14	NA	70499930	70514812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70507165_70507252_70507355_70511173
ES.7742.23	chr12	+	5994	5	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	62	-416	intron_retention	FALSE	canonical	3	450	junction_4	21.6159663212173	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGTTGAAGAGAAGTTT	NA	False	NA	12	True	AATAAA	-18	NA	70499930	70514398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70507355_70511173_70511241_70512751
ES.7742.24	chr12	+	6426	6	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	80	-417	intron_retention	FALSE	canonical	3	450	junction_5	49.8260975794814	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGTTGAAGAGAAGTT	NA	False	NA	11	True	AATAAA	-17	NA	70499948	70514397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70502902_70503354_70503401_70505552_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.3	chr12	+	3894	6	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	9	-417	intron_retention	FALSE	canonical	3	450	junction_5	26.5525893275967	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGTTGAAGAGAAGTT	NA	False	NA	11	True	AATAAA	-17	NA	70499877	70514397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70507355_70511173_70511241_70512751
ES.7742.4	chr12	+	2384	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	9	402	9	-402	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGATTTCTGTTAGTT	NA	False	NA	26	True	AATAAA	-32	NA	70499877	70514412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.5	chr12	+	2048	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	9	738	9	-738	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACTACATGGATTTC	NA	False	NA	NA	False	NA	NA	NA	70499877	70514076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.6	chr12	+	4540	8	NNC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	9	-419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.200755610141	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGATGTTGAAGAGAAG	NA	False	NA	9	True	AATAAA	-15	NA	70499877	70514395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70502268_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.7	chr12	+	4934	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	11	-2	intron_retention	FALSE	canonical	3	450	junction_6	48.372398006393	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTGGTGTTCTCATA	NA	False	NA	11	True	ATTAAA	-14	NA	70499879	70514812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70500095_70502785_70502902_70503354_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7742.9	chr12	+	1046	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	19	1730	19	57	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATGACTTAAGAATAT	NA	False	NA	NA	False	AATAAA	-19	NA	70499887	70513084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ES.7743.1	chr12	+	178	1	Intergenic	novelGene_6385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGACATTT	NA	False	NA	NA	False	NA	NA	NA	70768699	70768877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70768700_70768900
ES.7744.1	chr12	-	3707	4	NNC	ENSMUSG00000113900.2	novel	767	3	NA	NA	72924	2683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGTCAGTCATCCT	NA	False	NA	NA	False	AATAAA	-17	NA	70799195	70773264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70776451_70784398_70784712_70785535_70785629_70799080
ES.7744.2	chr12	-	641	2	NNC	ENSMUSG00000113900.2	novel	767	3	NA	NA	73559	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGCTCAACTGGAAAC	NA	False	NA	NA	False	NA	NA	NA	70798560	70775872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_70776451_70798497
ES.7745.1	chr12	-	258	1	Intergenic	novelGene_6386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTTCATAGCTTTAAAT	NA	False	NA	NA	False	NA	NA	NA	70834251	70833993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70834000_70834300
ES.7745.2	chr12	-	160	1	Intergenic	novelGene_6387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	70834254	70834094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70834100_70834300
ES.7746.1	chr12	+	4858	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-219	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTGTTATTATACG	568	False	NA	NA	False	AATAAA	-22	NA	70872068	70949009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.11	chr12	+	4298	11	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-40	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	50.0508741182409	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTCTTGTTATTAT	747	False	NA	NA	False	AATAAA	-19	NA	70872247	70949006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70936792_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.13	chr12	+	4789	15	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.2886058421888	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	773	False	NA	NA	False	AATAAA	-21	NA	70872273	70949008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70903189_70903327_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.16	chr12	+	4629	14	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.9095079612931	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	784	False	NA	NA	False	AATAAA	-18	NA	70872284	70949005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70910659_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.17	chr12	+	4761	15	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.2886058421888	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	804	False	NA	NA	False	AATAAA	-18	NA	70872304	70949005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70903189_70903333_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.18	chr12	+	5032	14	NIC	ENSMUSG00000048285.10	novel	2721	12	NA	NA	-12	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	44.4026759681902	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	950	False	NA	NA	False	AATAAA	-18	NA	70872450	70949005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872908_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.19	chr12	+	5013	14	NIC	ENSMUSG00000048285.10	novel	2721	12	NA	NA	31	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	48.8126475025993	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	993	False	NA	NA	False	AATAAA	-18	NA	70872493	70949005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872908_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.2	chr12	+	4697	14	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-73	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.2437187114437	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCTCTTGTTATTA	714	False	NA	NA	False	AATAAA	-18	NA	70872214	70949005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940391_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.21	chr12	+	4311	10	ISM	ENSMUSG00000048285.10	ENSMUST00000220515.2	2191	13	6722	-2228	6722	0	3prime_fragment	FALSE	canonical	0	0	junction_8	39.2903091749318	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	NA	False	NA	NA	False	AATAAA	-21	NA	70925020	70949008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.3	chr12	+	4370	13	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	46.5453780973173	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	719	False	NA	NA	False	AATAAA	-21	NA	70872219	70949008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70941650_70941783_70944115_70944208_70946157
ES.7746.4	chr12	+	3196	10	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-65	-3639	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	12.7347100283506	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTTGTTTGTTCA	722	False	NA	NA	False	AATAAA	-30	NA	70872222	70938784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705
ES.7746.5	chr12	+	4726	14	FSM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	-64	0	-64	0	multi-exon	FALSE	canonical	0	0	junction_12	41.9310507589719	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	723	False	NA	NA	False	AATAAA	-21	NA	70872223	70949008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.6	chr12	+	1116	6	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-63	-14552	combination_of_known_junctions	FALSE	canonical	3	120	junction_1	10.9105453575887	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTGCTGTCCTGGAAC	724	False	NA	NA	False	NA	NA	NA	70872224	70927871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392
ES.7746.8	chr12	+	5061	14	NNC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-58	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	45.2437187114437	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTCTTGTTATTAT	729	False	NA	NA	False	AATAAA	-19	NA	70872229	70949006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940013_70940717_70941650_70941783_70944115_70944208_70946157
ES.7746.9	chr12	+	4363	13	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	-41	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	51.2426146440202	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTGTCTCTTGTTATT	746	False	NA	NA	False	AATAAA	-17	NA	70872246	70949004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70941650_70941783_70944115_70944208_70946157
ES.7747.1	chr12	-	3360	1	Intergenic	novelGene_6388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTGTATCTG	NA	False	NA	NA	False	NA	NA	NA	70892827	70889467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70889500_70892800
ES.7748.1	chr12	-	4315	1	Intergenic	novelGene_6389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCAAAGAAATTCCTTA	NA	False	NA	NA	False	NA	NA	NA	70903995	70899680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_70899700_70904000
ES.7749.1	chr12	+	154	1	Intergenic	novelGene_6390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAGTAAATTA	NA	False	NA	NA	False	NA	NA	NA	70951794	70951948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70951800_70951900
ES.775.1	chr1	+	202	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTTATGTTTTATA	NA	False	NA	NA	False	NA	NA	NA	75028085	75028287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75028100_75028300
ES.7750.1	chr12	+	178	1	ISM	ENSMUSG00000113707.2	ENSMUST00000222619.2	1906	2	2044	5	2044	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAGAAACCT	NA	False	NA	NA	False	NA	NA	NA	70961076	70961254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_70961100_70961300
ES.7751.1	chr12	+	3740	14	NNC	ENSMUSG00000021076.7	novel	662	5	NA	NA	-10049	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	126.064180141676	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGCTCTGCAGCCTT	6239	False	NA	NA	False	AATAAA	-21	NA	70974581	71011492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70974697_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640_71009570_71009791
ES.7751.10	chr12	+	1456	13	NNC	ENSMUSG00000021076.7	novel	4022	13	NA	NA	-14	141	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	96.2124385582931	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTCTCTTGTGTCGTA	9689	False	NA	3	True	NA	NA	NA	70984674	71008976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004811_71004888_71006614_71006817_71008640
ES.7751.11	chr12	+	3262	7	FSM	ENSMUSG00000021076.7	ENSMUST00000220770.2	3035	7	-26	-201	-9	201	multi-exon	FALSE	canonical	3	306	junction_4	20.2127572477274	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9694	False	NA	NA	False	NA	NA	NA	70984679	71002418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723
ES.7751.12	chr12	+	3967	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	55	0	-3	0	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGCTCTGCAGCCTT	9700	False	NA	NA	False	AATAAA	-21	NA	70984685	71011492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ES.7751.13	chr12	+	3571	6	NNC	ENSMUSG00000021076.7	novel	3035	7	NA	NA	0	35512	intron_retention	FALSE	non_canonical	0	0	junction_5	135.952344591772	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACCCCTCCCCCACAAAA	9720	False	NA	NA	False	NA	NA	NA	70984705	71047004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70997399_71046971
ES.7751.15	chr12	+	1039	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	-20	1827	-20	15	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATCTGTGTAATATTA	4700	False	NA	20	True	ATTAAA	-31	NA	71021374	71041294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.16	chr12	+	2361	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	19	466	19	-466	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCCTTTCCTTTGTTTC	4739	False	NA	19	True	AATAAA	-29	NA	71021413	71042655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.17	chr12	+	3056	9	NIC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	19	0	intron_retention	FALSE	canonical	3	3391	junction_6	452.970956574481	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGGGTAATTGAAGC	4739	False	NA	4	True	ATTAAA	-15	NA	71021413	71041278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.18	chr12	+	1032	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4765	False	NA	1	True	ATTAAA	-12	NA	71021439	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.19	chr12	+	2404	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	-3	-1374	-3	-472	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGAGTTCCTTTCCTT	4767	False	NA	13	True	AATAAA	-23	NA	71021441	71042649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.2	chr12	+	180	1	Intergenic	novelGene_6391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTAGGTTGCAAA	2261	False	NA	NA	False	NA	NA	NA	70977246	70977426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70977200_70977400
ES.7751.20	chr12	+	978	11	FSM	ENSMUSG00000060073.10	ENSMUST00000162626.8	1394	11	-2	418	-2	-1	multi-exon	FALSE	canonical	3	10	junction_2	1218.25789141708	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTTGGGTAATTGAAG	4768	False	NA	3	True	ATTAAA	-14	NA	71021442	71041277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025614_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.21	chr12	+	2940	10	NIC	ENSMUSG00000060073.10	novel	875	11	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	320	junction_2	1189.69078875122	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACATTGTTGGGTAATT	4768	False	NA	-1	True	ATTAAA	-10	NA	71021442	71041273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.22	chr12	+	4509	8	NIC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	3391	junction_5	481.962781186452	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACATTGTTGGGTAATT	4769	False	NA	-1	True	ATTAAA	-10	NA	71021443	71041273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.26	chr12	+	974	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	1245.16007404671	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGGGTAATTGAAGC	4780	False	NA	4	True	ATTAAA	-15	NA	71021454	71041278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031235_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.27	chr12	+	1776	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	61	1009	-1	417	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGACAGCATTTATT	4781	False	NA	NA	False	NA	NA	NA	71021455	71042112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.29	chr12	+	1473	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	64	1309	2	117	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGTGGGTTTTTTTTT	4784	False	NA	NA	False	ATTAAA	-19	NA	71021458	71041812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.3	chr12	+	353	1	Intergenic	novelGene_6392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCTTTGCACTGCCA	2263	False	NA	NA	False	NA	NA	NA	70977248	70977601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_70977200_70977600
ES.7751.32	chr12	+	443	5	NIC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_2	1785.43762142507	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4791	False	NA	1	True	ATTAAA	-12	NA	71021465	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71039786_71039855_71040279_71040345_71041124
ES.7751.34	chr12	+	488	6	NIC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	30	junction_2	1594.49947005322	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4793	False	NA	1	True	ATTAAA	-12	NA	71021467	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.35	chr12	+	3117	9	NNC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	5	0	intron_retention	FALSE	canonical	3	96	junction_3	1337.33791073909	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4793	False	NA	1	True	ATTAAA	-12	NA	71021467	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031270_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.36	chr12	+	861	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	5	0	combination_of_known_splicesites	TRUE	canonical	3	6	junction_6	1323.58123436026	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4793	False	NA	1	True	ATTAAA	-12	NA	71021467	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.38	chr12	+	859	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	1326.87469986273	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4793	False	NA	1	True	ATTAAA	-12	NA	71021467	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71040279_71040345_71041124
ES.7751.39	chr12	+	1024	12	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1521.85686928124	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4793	False	NA	5	True	ATTAAA	-16	NA	71021467	71041279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71029634_71029728_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.4	chr12	+	1371	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	-3	2654	-3	3	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTGCTTATTTCAAATA	9642	False	NA	NA	False	AATAAA	-16	NA	70984627	71008838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ES.7751.40	chr12	+	2518	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	73	255	5	-255	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATCTCTGAAACAATTT	4793	False	NA	NA	False	AAAAAG	-20	NA	71021467	71042866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.41	chr12	+	3500	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	73	-727	5	727	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTGAAGGGTAAATT	4793	False	NA	NA	False	ATTAAA	-21	NA	71021467	71043848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.42	chr12	+	809	10	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	1274.53376612299	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGTAATTGAAGCTATC	4794	False	NA	8	True	ATTAAA	-19	NA	71021468	71041282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.43	chr12	+	1233	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	76	1537	8	-111	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGTGTATATACATTT	4796	False	NA	NA	False	NA	NA	NA	71021470	71041584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.44	chr12	+	1038	12	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1509.62149489574	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGTAATTGAAGCTAT	4796	False	NA	7	True	ATTAAA	-18	NA	71021470	71041281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71025674_71025783_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.45	chr12	+	845	10	NNC	ENSMUSG00000060073.10	novel	1394	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1612.62071038281	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4799	False	NA	1	True	ATTAAA	-12	NA	71021473	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025614_71030097_71030217_71031266_71031369_71033657_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.48	chr12	+	5108	8	NIC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	3391	junction_5	469.063113111266	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4801	False	NA	1	True	ATTAAA	-12	NA	71021475	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71033710_71035197_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.49	chr12	+	929	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	1260.2918273162	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTTGGGTAATTGAAG	4801	False	NA	3	True	ATTAAA	-14	NA	71021475	71041277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039849_71040265_71040345_71041124
ES.7751.5	chr12	+	1583	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	5	2434	5	223	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTAGTTTATTATG	9650	False	NA	8	True	AATAAA	-17	NA	70984635	71009058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ES.7751.50	chr12	+	1189	10	NNC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	0	2	intron_retention	FALSE	canonical	3	138	junction_2	1225.61749616819	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGTAATTGAAGCTAT	4807	False	NA	7	True	ATTAAA	-18	NA	71021481	71041281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025783_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.51	chr12	+	3193	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	1	1	intron_retention	FALSE	canonical	1	3	junction_5	1618.23762470164	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGGTAATTGAAGCTA	4808	False	NA	6	True	ATTAAA	-17	NA	71021482	71041280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71033710_71034094_71034254_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.52	chr12	+	2748	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	91	7	-3	-7	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACAATAAGCTAAACTTA	4811	False	NA	NA	False	ATTAAA	-22	NA	71021485	71043114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.54	chr12	+	2445	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	1	-285	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1240.27086154598	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGAAAAAAGAAAGTTGGA	4815	False	NA	NA	False	NA	NA	NA	71021489	71042836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033657_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.56	chr12	+	6574	7	NNC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	96	junction_3	1528.93710356792	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4819	False	NA	1	True	ATTAAA	-12	NA	71021493	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031270_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.57	chr12	+	820	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160864.8	859	10	39	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	1213.70727855801	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4821	False	NA	5	True	ATTAAA	-16	NA	71021495	71041279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71021542_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.58	chr12	+	886	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1260.78711922354	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4821	False	NA	1	True	ATTAAA	-12	NA	71021495	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030208_71031270_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.6	chr12	+	1909	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	-55	-1239	-27	1239	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAAATAAATAAACCTT	9676	False	NA	NA	False	NA	NA	NA	70984661	70995725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
ES.7751.60	chr12	+	945	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2024.53333141245	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4835	False	NA	1	True	ATTAAA	-12	NA	71021509	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031270_71031369_71031455_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039885_71040028_71040279_71040345_71041124
ES.7751.61	chr12	+	2355	12	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	18	-483	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1509.62149489574	627	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCTCTGATAAGAAAGAG	4836	False	NA	2	True	AATAAA	-12	NA	71021510	71042638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71025674_71025783_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.62	chr12	+	4057	9	NNC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	24	0	intron_retention	FALSE	canonical	1	3	junction_5	1387.21744870802	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4842	False	NA	5	True	ATTAAA	-16	NA	71021516	71041279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71034094_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.63	chr12	+	1314	11	NNC	ENSMUSG00000060073.10	novel	312	4	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1589.164170248	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4887	False	NA	5	True	ATTAAA	-16	NA	71021561	71041279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71022090_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040313_71041163
ES.7751.64	chr12	+	4057	10	NNC	ENSMUSG00000060073.10	novel	312	4	NA	NA	254	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1247.76787371156	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTGGGTAATTGAAGC	5072	False	NA	4	True	ATTAAA	-15	NA	71021746	71041278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71023744_71024379_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.65	chr12	+	987	1	NIC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	3364	-625	mono-exon	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACAGT	8182	False	NA	NA	False	NA	NA	NA	71024856	71025843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71024900_71025800
ES.7751.66	chr12	+	2534	8	NNC	ENSMUSG00000060073.10	novel	859	10	NA	NA	-3184	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	1355.8922960056	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	NA	False	NA	1	True	ATTAAA	-12	NA	71030481	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71031369_71031445_71031520_71033636_71033710_71034094_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.67	chr12	+	4915	4	NNC	ENSMUSG00000060073.10	novel	1027	10	NA	NA	1445	0	intron_retention	FALSE	non_canonical	0	0	junction_1	1720.11181807075	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	NA	False	NA	1	True	ATTAAA	-12	NA	71035110	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71036994_71037038_71039855_71040279_71040345_71041124
ES.7751.68	chr12	+	975	5	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	2904	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1546.45681721153	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	NA	False	NA	1	True	ATTAAA	-12	NA	71036569	71041275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71036994_71037038_71037306_71039786_71039855_71040279_71040345_71041124
ES.7751.8	chr12	+	3764	14	NNC	ENSMUSG00000021076.7	novel	4022	13	NA	NA	-27	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	94.5177106850144	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATCTGATTGCTCTGCA	9676	False	NA	NA	False	AATAAA	-16	NA	70984661	71011487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640_71009570_71009791
ES.7751.9	chr12	+	2096	14	NNC	ENSMUSG00000021076.7	novel	4022	13	NA	NA	-26	986	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	94.5177106850144	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAACCATTGCTCTTGT	9677	False	NA	NA	False	AATAAA	-14	NA	70984662	71009821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640_71009570_71009792
ES.7752.1	chr12	-	168	1	Intergenic	novelGene_6393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACCCTTTATTTGAAAAC	5405	False	NA	NA	False	NA	NA	NA	71003852	71003684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71003700_71003900
ES.7752.2	chr12	-	168	2	Intergenic	novelGene_6394	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACCCTTTATTTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	71039650	71003684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71003834_71039631
ES.7752.3	chr12	-	1805	1	Antisense	novelGene_ENSMUSG00000021076.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGTAAAAA	4170	False	NA	NA	False	NA	NA	NA	71011417	71009612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71009600_71011400
ES.7752.4	chr12	-	480	1	Intergenic	novelGene_6395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATCCCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	71024139	71023659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71023700_71024100
ES.7752.5	chr12	-	1342	1	Intergenic	novelGene_6396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAACTCAGCATCTCA	NA	False	NA	NA	False	NA	NA	NA	71025283	71023941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71023900_71025300
ES.7753.1	chr12	-	3022	1	Antisense	novelGene_ENSMUSG00000060073.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71044866	71041844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71041800_71044900
ES.7754.1	chr12	+	5888	1	Intergenic	novelGene_6397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTCAACTTATCTCCA	357	False	NA	NA	False	NA	NA	NA	71048752	71054640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71048800_71054600
ES.7754.2	chr12	+	159	2	Antisense	novelGene_ENSMUSG00000085622.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1837	False	NA	NA	False	NA	NA	NA	71050232	71050627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_71050253_71050488
ES.7754.3	chr12	+	218	1	Intergenic	novelGene_6398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAAGTAAGGCCGGGGC	1839	False	NA	NA	False	NA	NA	NA	71050234	71050452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71050200_71050500
ES.7754.4	chr12	+	190	1	Intergenic	novelGene_6399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	2073	False	NA	NA	False	NA	NA	NA	71050468	71050658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71050500_71050700
ES.7754.5	chr12	+	1911	2	Antisense	novelGene_ENSMUSG00000085622.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3929	False	NA	NA	False	AAAAAG	-43	NA	71052324	71056032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_71053290_71055086
ES.7754.6	chr12	+	1920	2	Antisense	novelGene_ENSMUSG00000085622.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAACAATCCAGAAAAT	3929	False	NA	NA	False	NA	NA	NA	71052324	71056056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_71053290_71055101
ES.7754.7	chr12	+	3732	1	Intergenic	novelGene_6400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCAAACAATCCAGAAAAT	3929	False	NA	NA	False	NA	NA	NA	71052324	71056056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71052300_71056100
ES.7755.1	chr12	+	4286	5	ISM	ENSMUSG00000048118.18	ENSMUST00000134718.2	1639	15	-653	40497	-614	-20575	5prime_fragment	FALSE	canonical	3	77	junction_1	9.86154146165801	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCAAAAAAAAAAAGAAG	2767	False	NA	NA	False	NA	NA	NA	71062149	71073538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273
ES.7755.10	chr12	+	5110	23	NIC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	0	-3	intron_retention	FALSE	canonical	3	75	junction_5	14.4905212677657	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCTAGGTTAATTCACT	3420	False	NA	3	True	AATAAA	-14	NA	71062802	71145363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.12	chr12	+	5633	23	NIC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	19	-4	intron_retention	FALSE	canonical	3	75	junction_5	14.5747574154429	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTCTAGGTTAATTCAC	3439	False	NA	2	True	AATAAA	-13	NA	71062821	71145362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.13	chr12	+	4896	24	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	44	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	23.6389828945184	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	3464	False	NA	-6	True	AATAAA	-5	NA	71062846	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119499_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.14	chr12	+	6695	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	94	-1791	55	1791	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCTTGGTCATG	3475	False	NA	NA	False	NA	NA	NA	71062857	71147157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.15	chr12	+	4795	4	ISM	ENSMUSG00000048118.18	ENSMUST00000134718.2	1639	15	79	40497	79	-20575	intron_retention	FALSE	canonical	3	77	junction_1	11.1455023315337	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCCCAAAAAAAAAAAGAAG	3499	False	NA	NA	False	NA	NA	NA	71062881	71073538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966
ES.7755.16	chr12	+	5287	23	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	628	12	-90	-12	3prime_fragment	FALSE	canonical	3	75	junction_4	14.2826398698872	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	124	False	NA	-6	True	AATAAA	-5	NA	71063391	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.17	chr12	+	5321	24	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	33.9577186227855	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	184	False	NA	6	True	AATAAA	-17	NA	71063451	71145366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71118983_71119114_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134282_71134382_71144274
ES.7755.18	chr12	+	4665	19	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	20955	0	-11396	0	3prime_fragment	FALSE	canonical	3	82	junction_2	14.9150888882101	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	8740	False	NA	6	True	AATAAA	-17	NA	71083718	71145366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.19	chr12	+	4939	22	NNC	ENSMUSG00000048118.18	novel	1887	10	NA	NA	-11386	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	41.9491107314144	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGGTTAATTCACTC	8750	False	NA	4	True	AATAAA	-15	NA	71083728	71145364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083801_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71095199_71095349_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71114241_71114462_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.2	chr12	+	5805	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-54	-753	-54	753	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACATAGGCTATACAGT	3327	False	NA	NA	False	AATAAA	-22	NA	71062709	71146119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.20	chr12	+	5247	20	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-11383	678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	24.8621685261506	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAACTTTCCTGTCTTTT	8753	False	NA	NA	False	ATTAAA	-21	NA	71083731	71146044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083801_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.21	chr12	+	5943	19	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-11382	678	intron_retention	FALSE	canonical	2	3	junction_1	25.528306728893	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAACTTTCCTGTCTTTT	8754	False	NA	NA	False	ATTAAA	-21	NA	71083732	71146044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083801_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.22	chr12	+	4619	19	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-11370	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.9805245197434	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	8766	False	NA	-6	True	AATAAA	-5	NA	71083744	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083964_71084052_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.23	chr12	+	4961	19	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-11355	-12	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	25.8946703129676	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	8781	False	NA	-6	True	AATAAA	-5	NA	71083759	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114462_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.24	chr12	+	4748	20	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-11342	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.199172405531	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	8794	False	NA	-6	True	AATAAA	-5	NA	71083772	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71095199_71095349_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.25	chr12	+	5027	19	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	21069	-476	-11282	476	3prime_fragment	FALSE	canonical	3	82	junction_2	14.9150888882101	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTTTCTGTGTTT	8854	False	NA	NA	False	ATTAAA	-13	NA	71083832	71145842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.26	chr12	+	4164	16	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-2215	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	35.1830767399454	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGGTTAATTCACTC	NA	False	NA	4	True	AATAAA	-15	NA	71092899	71145364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119047_71119114_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.27	chr12	+	4035	14	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	31201	3	-1150	-3	3prime_fragment	FALSE	canonical	3	82	junction_3	16.6039846932087	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCTAGGTTAATTCACT	NA	False	NA	3	True	AATAAA	-14	NA	71093964	71145363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.28	chr12	+	3138	10	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	18962	1903	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	36.0804998459805	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCACCCAAAGCTAGGA	2617	False	NA	NA	False	TATAAA	-10	NA	71114076	71147269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274_71145341_71147251
ES.7755.29	chr12	+	179	1	Intergenic	novelGene_6404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATTTAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	71122920	71123099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71122900_71123100
ES.7755.3	chr12	+	5045	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-46	-1	-46	1	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTAATTCACTCTTT	3335	False	NA	7	True	AATAAA	-18	NA	71062717	71145367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.30	chr12	+	1764	1	NIC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	36746	11445	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGTGGTGGTACAC	NA	False	NA	NA	False	AAGAAA	-11	NA	71131860	71133624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71131900_71133600
ES.7755.4	chr12	+	5506	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-25	-483	-25	483	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTTTATATGCT	3356	False	NA	NA	False	ATTAAA	-20	NA	71062738	71145849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.5	chr12	+	7324	24	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	23.6173816994282	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGGTTAATTCACTC	3364	False	NA	4	True	AATAAA	-15	NA	71062746	71145364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71116047_71116230_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7755.6	chr12	+	3963	22	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	-15	11742	-15	11445	5prime_fragment	FALSE	canonical	3	75	junction_5	14.7523778782007	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGTGGTGGTACAC	3366	False	NA	NA	False	AAGAAA	-11	NA	71062748	71133624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228
ES.7755.8	chr12	+	5190	25	NNC	ENSMUSG00000048118.18	novel	4998	24	NA	NA	16	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	28.9322724459882	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACAATTCTAGGT	3397	False	NA	-6	True	AATAAA	-5	NA	71062779	71145354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71114241_71114462_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ES.7756.1	chr12	-	5172	2	ISM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	255	-3365	18	3365	intron_retention	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTTCGTGTCCCGTCTC	NA	False	NA	-4	True	AATAAA	-17	NA	71062351	71053203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_71057254_71061229
ES.7756.2	chr12	-	4324	1	FSM	ENSMUSG00000085622.10	ENSMUST00000222159.2	1790	1	1568	-4102	1568	91	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGTTTTCTCCTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	71060801	71056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71056500_71060800
ES.7756.3	chr12	-	2280	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	-1126	-91	-1126	91	multi-exon	FALSE	canonical	3	10	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTGTTTTCTCCTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	71063732	71056477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71057254_71061229_71061282_71062280
ES.7756.4	chr12	-	1838	1	FSM	ENSMUSG00000085622.10	ENSMUST00000222159.2	1790	1	-16	-32	-15	32	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATTATATGTATAC	NA	False	NA	NA	False	NA	NA	NA	71062385	71060547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71060500_71062400
ES.7757.1	chr12	-	3616	1	Intergenic	novelGene_6401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTAGTTGATGAAGC	NA	False	NA	NA	False	NA	NA	NA	71091398	71087782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71087800_71091400
ES.7757.2	chr12	-	149	1	Intergenic	novelGene_6402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	71088375	71088226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71088200_71088400
ES.7758.1	chr12	-	242	1	Intergenic	novelGene_6403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTCATGTACTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	71092716	71092474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71092500_71092700
ES.7759.1	chr12	+	195	1	Intergenic	novelGene_6405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTTTTCGAGACGG	NA	False	NA	NA	False	NA	NA	NA	71149336	71149531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71149300_71149500
ES.776.1	chr1	+	198	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTTCCACTTAAGAGAGA	4823	False	NA	NA	False	NA	NA	NA	75033479	75033677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75033500_75033700
ES.7760.1	chr12	+	1938	2	Intergenic	novelGene_6406	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGGTGGTGTTTGTACT	NA	False	NA	NA	False	NA	NA	NA	71154056	71156828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71154416_71155249
ES.7761.1	chr12	-	171	1	Intergenic	novelGene_6407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGAAACAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	71161905	71161734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71161700_71161900
ES.7762.1	chr12	+	5969	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	-1466	4	-474	-4	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183147	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.10	chr12	+	6116	31	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	330	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.6346447472902	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183951	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71198158_71198275_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225978_71230670_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.12	chr12	+	4969	26	NIC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	39.3292562858745	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183951	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71184813_71186428_71186503_71187638_71187709_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.14	chr12	+	5267	29	NIC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	330	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	32.0702950801924	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183951	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.15	chr12	+	5176	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	330	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	37.7526841499142	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTAAGTCTGGCTGTTT	NA	False	NA	14	True	AATAAA	-12	NA	71183951	71290069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207042_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262923_71262971_71265964_71266074_71289717
ES.7762.16	chr12	+	5111	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	30.7141339563947	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183951	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225865_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.17	chr12	+	5424	31	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	330	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	38.6667385056804	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACTAAGTCTGGCTGTT	NA	False	NA	13	True	AATAAA	-11	NA	71183951	71290068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209556_71209596_71209616_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.18	chr12	+	2775	13	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	330	80280	330	8136	5prime_fragment	FALSE	canonical	3	118	junction_6	8.91471941354422	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTCTTAGTGTGTTTT	NA	False	NA	NA	False	CATAAA	-21	NA	71183951	71209797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349
ES.7762.19	chr12	+	3842	21	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	29199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.3531683147107	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71183951	71230860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71230633
ES.7762.2	chr12	+	5435	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	326	2	326	-2	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGCTGTTTCTTAGA	NA	False	NA	20	True	AATAAA	-18	NA	71183947	71290075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.20	chr12	+	5555	28	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	330	26516	330	-26516	5prime_fragment	FALSE	canonical	3	69	junction_27	19.446666539697	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATATTCATGGTTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	71183951	71263561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815
ES.7762.21	chr12	+	5427	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	330	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	31.9877354618332	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183951	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235586_71236186_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.22	chr12	+	5615	27	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	45.219386322774	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGGCTGTTTCTTAG	NA	False	NA	19	True	AATAAA	-17	NA	71183951	71290074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225865_71225978_71230670_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.24	chr12	+	5099	15	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	10837	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	48.2444878949388	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTGGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	71183951	71212498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71210588_71210870_71211768_71211861
ES.7762.25	chr12	+	5518	24	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	330	52571	330	35845	5prime_fragment	FALSE	canonical	3	112	junction_16	14.3662595684701	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTTGAGTAATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	71183951	71237506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180
ES.7762.26	chr12	+	5316	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	333	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	30.705071679981	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183954	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262923_71262971_71265964_71266074_71289717
ES.7762.27	chr12	+	5694	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	339	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_24	30.3175692768848	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183960	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236969_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.28	chr12	+	5046	24	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	339	53034	339	35382	5prime_fragment	FALSE	canonical	3	112	junction_16	14.3662595684701	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTAAATATGTTTAACA	NA	False	NA	NA	False	AATAAA	-17	NA	71183960	71237043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180
ES.7762.29	chr12	+	5274	29	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	340	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	52.1662740960213	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTAAGTCTGGCTGTTTC	NA	False	NA	15	True	AATAAA	-13	NA	71183961	71290070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71204846_71204957_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225865_71225933_71231202_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.3	chr12	+	5318	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	327	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	31.3296310038073	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183948	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236315_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.30	chr12	+	5904	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	341	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	38.7431862752487	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183962	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225865_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236969_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.31	chr12	+	4996	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	342	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	30.8020807021699	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTAAGTCTGGCTGTTT	NA	False	NA	14	True	AATAAA	-12	NA	71183963	71290069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213992_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.32	chr12	+	5269	29	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	342	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	37.7397100450668	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTAAGTCTGGCTGTTT	NA	False	NA	14	True	AATAAA	-12	NA	71183963	71290069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71198154_71198275_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.33	chr12	+	1723	7	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	347	90386	347	-1970	5prime_fragment	FALSE	canonical	3	118	junction_6	10.2143689640297	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATATCATTTTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	71183968	71199691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423
ES.7762.34	chr12	+	6158	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	347	42324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	29.1953826892262	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTTCATAGTCATTAC	NA	False	NA	NA	False	NA	NA	NA	71183968	71243985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71242619
ES.7762.35	chr12	+	5270	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	347	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	32.3622480843058	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTCTGGCTGTTTCTT	NA	False	NA	17	True	AATAAA	-15	NA	71183968	71290072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207042_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.36	chr12	+	5406	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	347	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	32.5545732242358	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183968	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231202_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.37	chr12	+	4527	13	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	348	78510	348	9906	intron_retention	FALSE	canonical	3	118	junction_6	8.91471941354422	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAACATTTTATTAT	NA	False	NA	NA	False	AATAAA	-31	NA	71183969	71211567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349
ES.7762.38	chr12	+	4933	27	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	348	39773	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	29.5778233333032	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGTGTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	71183969	71241434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225865_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065
ES.7762.39	chr12	+	5109	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	348	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5660363618702	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183969	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186466_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.41	chr12	+	5524	31	NIC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	349	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	38.3904502014064	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183970	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71198158_71198275_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.42	chr12	+	4984	27	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	349	48643	349	39773	5prime_fragment	FALSE	canonical	3	99	junction_26	15.8446601237726	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTGTGTGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	71183970	71241434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065
ES.7762.43	chr12	+	5338	29	NIC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	351	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	32.8492808917036	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183972	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71184813_71186428_71186503_71187638_71187709_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.45	chr12	+	4928	27	NIC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	359	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	41.0953574308201	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183980	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71184813_71186428_71186503_71187638_71187709_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.46	chr12	+	5356	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	359	-6	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_13	31.3486777347846	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71183980	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209533_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.47	chr12	+	5391	28	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	370	-26526	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	29.7060126561723	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACAGTTTTATATT	NA	False	NA	NA	False	AATAAA	-11	NA	71183991	71263551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236315_71237668_71237740_71240040_71240164_71241065_71241241_71262815
ES.7762.49	chr12	+	4712	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	-352	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	30.6432188046648	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71184261	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207042_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.5	chr12	+	5379	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	329	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	32.4691749912676	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71183950	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211208_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.50	chr12	+	4876	30	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	-157	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	37.9586733159218	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71184456	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206970_71207183_71207897_71207971_71209349_71209533_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.51	chr12	+	4395	27	ISM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	1724	4	1724	-4	3prime_fragment	FALSE	canonical	3	73	junction_26	19.0535293908641	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTCTGGCTGTTTCTTA	NA	False	NA	18	True	AATAAA	-16	NA	71186337	71290073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.52	chr12	+	4635	29	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	2738	6	1746	-6	3prime_fragment	FALSE	canonical	3	69	junction_26	23.379603661032	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71186359	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.53	chr12	+	2508	15	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	33668	6	20082	-6	3prime_fragment	FALSE	canonical	3	69	junction_12	24.5166540647498	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71217289	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.54	chr12	+	1568	1	Intergenic	novelGene_6409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71229292	71230860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71229300_71230900
ES.7762.55	chr12	+	180	1	Intergenic	novelGene_6410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71230278	71230458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71230300_71230500
ES.7762.56	chr12	+	1460	9	NNC	ENSMUSG00000034601.18	novel	5763	30	NA	NA	38325	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.2025349437143	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAAGTCTGGCTGTTTCT	NA	False	NA	16	True	AATAAA	-14	NA	71235532	71290071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71235582_71236180_71236429_71236792_71236969_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ES.7762.57	chr12	+	6374	1	Intergenic	novelGene_6412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAAGGGAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	71268070	71274444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71268100_71274400
ES.7762.58	chr12	+	177	1	Intergenic	novelGene_6413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71269322	71269499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71269300_71269500
ES.7762.59	chr12	+	8511	3	Genic_Genomic	ENSMUSG00000034601.18	novel	5763	30	NA	NA	82417	-8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTAAGTCTGGCTGTTT	NA	False	NA	14	True	AATAAA	-12	NA	71279624	71290069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_71284690_71286574_71288981_71289029
ES.7762.6	chr12	+	5051	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	329	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	29.4410666592715	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTCTGGCTGTTTCTT	NA	False	NA	17	True	AATAAA	-15	NA	71183950	71290072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236315_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ES.7762.60	chr12	+	1338	1	Intergenic	novelGene_6414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	71286492	71287830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71286500_71287800
ES.7763.1	chr12	-	5360	4	ISM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	-36	-2	0	1	intron_retention	FALSE	canonical	3	171	junction_3	59.2339992459286	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	False	NA	-17	True	AATAAA	-14	NA	71183458	71169945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774
ES.7763.10	chr12	-	3609	3	ISM	ENSMUSG00000021079.17	ENSMUST00000221815.2	1193	4	3523	-1471	3436	-1	3prime_fragment	FALSE	canonical	3	171	junction_2	70	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGTTGTCTTTACTGT	NA	False	NA	-20	True	AATAAA	-11	NA	71179935	71169948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_71172332_71173106_71173172_71178774
ES.7763.11	chr12	-	697	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	2	95	2	28	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGACTGTTAATTTT	NA	False	NA	-25	True	AATAAA	-13	NA	71183445	71170041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
ES.7763.2	chr12	-	1163	6	FSM	ENSMUSG00000021079.17	ENSMUST00000220482.2	859	6	-52	-252	9	0	multi-exon	FALSE	canonical	1	2	junction_4	130.329735670721	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183438	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71179280_71179573_71183328
ES.7763.3	chr12	-	2625	3	NNC	ENSMUSG00000021079.17	novel	794	4	NA	NA	8252	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71175119	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_71170463_71172235_71172332_71173106
ES.7763.4	chr12	-	891	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	-50	-123	0	0	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183458	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
ES.7763.5	chr12	-	6976	3	ISM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	3950	-1	3899	0	intron_retention	FALSE	canonical	3	274	junction_1	18.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71179472	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_71170461_71172235_71172332_71173106
ES.7763.6	chr12	-	989	6	NNC	ENSMUSG00000021079.17	novel	990	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	124.393890525218	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183458	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71180673_71180772_71183328
ES.7763.7	chr12	-	1088	5	NIC	ENSMUSG00000021079.17	novel	859	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	145.592753940572	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183449	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_71170461_71172235_71172332_71173106_71173172_71179280_71179573_71183328
ES.7763.8	chr12	-	2657	4	FSM	ENSMUSG00000021079.17	ENSMUST00000221815.2	1193	4	9	-1473	0	0	multi-exon	FALSE	canonical	3	163	junction_3	67.9607729993315	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183449	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71172332_71173106_71173172_71178774_71178861_71183328
ES.7763.9	chr12	-	2548	3	FSM	ENSMUSG00000021079.17	ENSMUST00000221797.2	2564	3	23	-7	-4	0	multi-exon	FALSE	canonical	3	89	junction_2	111	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183426	71169946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_71172332_71173106_71173172_71183328
ES.7764.1	chr12	-	2999	1	Antisense	novelGene_ENSMUSG00000034601.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCTTTTCACAGTAAG	NA	False	NA	NA	False	AAAAAG	-44	NA	71189155	71186156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71186200_71189200
ES.7764.2	chr12	-	1815	2	Antisense	novelGene_ENSMUSG00000034601.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71189153	71186223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71187707_71188821
ES.7765.1	chr12	-	4599	6	Antisense	novelGene_ENSMUSG00000034601.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAACTTAAAGGAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	71217353	71193264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71197237_71199421_71199569_71201532_71201696_71203818_71203943_71205599_71205730_71217290
ES.7765.2	chr12	-	165	1	Intergenic	novelGene_6408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	71208264	71208099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71208100_71208300
ES.7766.1	chr12	-	1812	1	Intergenic	novelGene_6411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAATTGAGTATGATAGC	NA	False	NA	NA	False	NA	NA	NA	71233704	71231892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71231900_71233700
ES.7767.1	chr12	-	525	2	NNC	ENSMUSG00000113572.2	novel	1078	2	NA	NA	797	61	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACAAAAGACTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	71316334	71315456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_71315914_71316266
ES.7768.1	chr12	-	155	1	Intergenic	novelGene_6415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	71351239	71351084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71351100_71351200
ES.7769.1	chr12	-	176	1	Intergenic	novelGene_6416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	71352542	71352366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71352400_71352500
ES.777.1	chr1	+	175	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCGGAGCAAGCGGGGC	NA	False	NA	NA	False	NA	NA	NA	75048515	75048690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75048500_75048700
ES.7770.1	chr12	+	3798	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-160	12	-160	-12	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCTGGCTGTTGGTG	1053	False	NA	NA	False	TATAAA	-24	NA	71356497	71366869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
ES.7770.2	chr12	+	3844	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-194	-1202	-94	-11	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGCTGGCTGTTGGTGT	1119	False	NA	NA	False	TATAAA	-25	NA	71356563	71366870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
ES.7770.3	chr12	+	3852	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	-87	-115	-87	115	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTAAATTAGGTT	1126	False	NA	NA	False	AATGAA	-16	NA	71356570	71366996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
ES.7770.4	chr12	+	3858	4	NNC	ENSMUSG00000044548.12	novel	3650	4	NA	NA	-87	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.2748718344933	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGCTGGCTGTTGGTG	1126	False	NA	NA	False	TATAAA	-24	NA	71356570	71366869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71357082_71359459_71359593_71360558_71360715_71363811
ES.7771.1	chr12	-	205	1	Intergenic	novelGene_6417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTCTAAGAAGAAAAGCA	5692	False	NA	NA	False	AATAAA	-8	NA	71378518	71378313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71378300_71378500
ES.7772.1	chr12	+	1223	1	Genic_Genomic	ENSMUSG00000113278.2	novel	NA	NA	NA	NA	4775	822	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTCTCAGTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	71389176	71390399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_71389200_71390400
ES.7773.1	chr12	-	243	1	Intergenic	novelGene_6418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCCCATTGATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	71422820	71422577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71422600_71422800
ES.7774.1	chr12	-	176	1	Intergenic	novelGene_6419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71491740	71491564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71491600_71491700
ES.7775.1	chr12	-	177	1	Intergenic	novelGene_6420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTTTAGATAG	NA	False	NA	NA	False	NA	NA	NA	71845753	71845576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_71845600_71845800
ES.7776.1	chr12	+	201	1	Intergenic	novelGene_6421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTATACATTTACA	NA	False	NA	NA	False	AAAAAG	-6	NA	71845798	71845999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71845800_71846000
ES.7777.1	chr12	+	181	1	Intergenic	novelGene_6422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCCTTATTTTAATCTT	NA	False	NA	3	True	NA	NA	NA	71861861	71862042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71861900_71862000
ES.7778.1	chr12	+	5901	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-50	43	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTACTCTACCATTGA	1753	False	NA	65	True	ATTAAA	-19	NA	71877801	72039150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.10	chr12	+	3462	25	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-1	-2351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	33.843158466668	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCAATTTCTTCTCTC	1802	False	NA	NA	False	NA	NA	NA	71877850	72036748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032601_72035659_72035831_72036452
ES.7778.11	chr12	+	3621	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	2	-2177	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGAGTGGGATTCATTT	1805	False	NA	NA	False	AAAAAG	-45	NA	71877853	72036922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.12	chr12	+	4559	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	4	-1237	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCAGCTCCTAGTAT	1807	False	NA	NA	False	AATAAA	-18	NA	71877855	72037862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.13	chr12	+	4690	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-19	-1238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0302132580371	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGCCAGCTCCTAGTA	1822	False	NA	NA	False	AATAAA	-17	NA	71877870	72037861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71906690_71906838_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.14	chr12	+	6067	26	NNC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0302132580371	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATCTGTTTTCTATGC	1822	False	NA	18	True	AATAAA	-18	NA	71877870	72039103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71878106_71906690_71906838_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.15	chr12	+	7149	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-18	1296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.8833809523539	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATACGCTTCCTCCCAA	1823	False	NA	NA	False	NA	NA	NA	71877871	72040403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71898166_71898232_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.17	chr12	+	3739	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-18	-2176	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTGGGATTCATTTT	1823	False	NA	NA	False	NA	NA	NA	71877871	72036923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.18	chr12	+	5932	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0302132580371	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	1823	False	NA	19	True	AATAAA	-19	NA	71877871	72039104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71906690_71906838_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.19	chr12	+	4146	26	NNC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	35.0928824692415	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	1823	False	NA	19	True	AATAAA	-19	NA	71877871	72039104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452_72036615_72038388
ES.7778.2	chr12	+	6000	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-15	42	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGTACTCTACCATTG	1788	False	NA	64	True	ATTAAA	-18	NA	71877836	72039149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.20	chr12	+	6110	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1321729798025	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGATCTGTTTTCTATG	1823	False	NA	17	True	AATAAA	-17	NA	71877871	72039102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71906690_71907018_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.21	chr12	+	5605	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-3	-160	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTCTCGTATCTTAT	1838	False	NA	NA	False	TTTAAA	-42	NA	71877886	72038939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.22	chr12	+	3545	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	1	-2351	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCAATTTCTTCTCTC	1842	False	NA	NA	False	NA	NA	NA	71877890	72036748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.23	chr12	+	2885	2	NNC	ENSMUSG00000034574.11	novel	3035	12	NA	NA	1	-89639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGACACGCTTTGTTGT	1842	False	NA	NA	False	ATTAAA	-18	NA	71877890	71909495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71906690
ES.7778.26	chr12	+	4646	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-15	-1234	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGCTCCTAGTATCCT	1858	False	NA	NA	False	AATAAA	-21	NA	71877906	72037865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.27	chr12	+	5776	24	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	3	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.9768881913368	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATCTGTTTTCTATGC	1876	False	NA	18	True	AATAAA	-18	NA	71877924	72039103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.29	chr12	+	5941	26	NNC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	44.2247713391488	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTACAGATCTGTTTTCT	1887	False	NA	14	True	AATAAA	-14	NA	71877935	72039099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021402_72021493_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.31	chr12	+	4695	26	NNC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	64	-1238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.0302132580371	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGCCAGCTCCTAGTA	1952	False	NA	NA	False	AATAAA	-17	NA	71878000	72037861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71878106_71906690_71906838_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.32	chr12	+	1932	1	Intergenic	novelGene_6423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTGGGTATTGGGAA	4872	False	NA	NA	False	NA	NA	NA	71894605	71896537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71894600_71896500
ES.7778.33	chr12	+	3703	1	Intergenic	novelGene_6424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGTTTGGTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	71908275	71911978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_71908300_71912000
ES.7778.34	chr12	+	5464	23	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	25968	-2	25968	0	3prime_fragment	FALSE	canonical	3	116	junction_10	15.662768403114	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGATCTGTTTTCTAT	2813	False	NA	16	True	AATAAA	-16	NA	71962471	72039101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.36	chr12	+	4762	18	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	55667	-2	55667	0	3prime_fragment	FALSE	canonical	3	116	junction_5	16.1320245019921	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAGATCTGTTTTCTAT	NA	False	NA	16	True	AATAAA	-16	NA	71992170	72039101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.37	chr12	+	4663	17	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	56495	-5	56495	-3	3prime_fragment	FALSE	canonical	3	116	junction_4	15.9372549000761	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	NA	False	NA	19	True	AATAAA	-19	NA	71992998	72039104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.38	chr12	+	4432	3	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	94520	-49	94520	41	3prime_fragment	FALSE	canonical	3	144	junction_2	11.5	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGTACTCTACCATT	NA	False	NA	63	True	ATTAAA	-17	NA	72031023	72039148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72032589_72035659_72035831_72036452
ES.7778.4	chr12	+	3772	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-6	-2034	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAAGTATTTTATGG	1797	False	NA	NA	False	AAAAAG	-6	NA	71877845	72037065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.5	chr12	+	6100	26	NNC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-6	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1321729798025	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAATTAAATGTCTCG	1797	False	NA	NA	False	TTTAAA	-34	NA	71877845	72038931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71878106_71906690_71907018_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.6	chr12	+	3453	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-4	-2351	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCAATTTCTTCTCTC	1799	False	NA	NA	False	NA	NA	NA	71877847	72036748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.7	chr12	+	5895	26	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	43.2078881687129	248	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGATCTGTTTTCTA	1799	False	NA	15	True	AATAAA	-15	NA	71877847	72039100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021402_72021493_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.8	chr12	+	6554	24	NNC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_17	34.6568923741861	248	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTACAGATCTGTTTTCT	1800	False	NA	14	True	AATAAA	-14	NA	71877848	72039099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017943_72021960_72022071_72023569_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7778.9	chr12	+	3513	24	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	-1	-2351	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	35.3313240265196	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCAATTTCTTCTCTC	1802	False	NA	NA	False	NA	NA	NA	71877850	72036748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ES.7779.1	chr12	-	1299	2	Antisense	novelGene_ENSMUSG00000034574.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAACATTATTGTCT	NA	False	NA	NA	False	ATTAAA	-7	NA	72036583	71997372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_71998347_72036258
ES.7779.2	chr12	-	1457	6	Antisense	novelGene_ENSMUSG00000034574.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGGCTAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	72028253	72006409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_72006690_72017869_72017950_72021957_72022069_72023567_72023655_72024412_72024586_72027527
ES.7779.3	chr12	-	589	3	Antisense	novelGene_ENSMUSG00000034574.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGAGCTTGCCGCCAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	72054600	72028561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_72028865_72036258_72036400_72054455
ES.778.1	chr1	+	146	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	75067431	75067577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75067400_75067600
ES.7780.1	chr12	+	766	3	Intergenic	novelGene_6425	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCCTTAGTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	72099695	72104965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72099854_72100646_72100796_72104506
ES.7781.1	chr12	-	3175	1	FSM	ENSMUSG00000043398.6	ENSMUST00000050649.6	3150	1	-20	-5	-20	5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTGTTTTGTTTTTT	NA	False	NA	0	True	AATACA	-24	NA	72117919	72114744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72114700_72117900
ES.7782.1	chr12	-	3109	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	130	-1408	130	1408	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTTCCTAAGACTT	NA	False	NA	NA	False	AATAAA	-20	NA	72132083	72118793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
ES.7782.2	chr12	-	6030	3	NIC	ENSMUSG00000019718.9	novel	1831	5	NA	NA	140	1402	intron_retention	FALSE	canonical	0	0	junction_2	10.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTGTGTTTTCCTA	NA	False	NA	NA	False	AATAAA	-14	NA	72132073	72118799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72124056_72124137_72124261_72131422
ES.7782.3	chr12	-	1750	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	24	57	24	-57	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGAGGTGGGTTATTAT	NA	False	NA	NA	False	AATAAA	-21	NA	72132189	72120258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
ES.7782.4	chr12	-	3468	2	ISM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	5373	64	4952	-64	intron_retention	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGCTCATAGAGGTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	72126840	72120265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72120811_72123917
ES.7782.5	chr12	-	905	1	NIC	ENSMUSG00000019718.9	novel	1831	5	NA	NA	22	-7249	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGCTTCAGTGTCTTT	NA	False	NA	-3	True	AATAAA	-22	NA	72132191	72131286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72131300_72132200
ES.7783.1	chr12	+	1507	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	20	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132382	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.11	chr12	+	3769	9	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.458652195925	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCATGTTCTGA	NA	False	NA	7	True	AATAAA	-13	NA	72132625	72148228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72143250_72145169_72146820_72146898_72147383
ES.7783.12	chr12	+	4352	5	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	6	intron_retention	FALSE	canonical	1	4	junction_4	287.922732690561	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132630	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72147383
ES.7783.13	chr12	+	4391	7	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	6	intron_retention	FALSE	non_canonical	0	0	junction_1	247.018723986665	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132630	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132650_72132687_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.14	chr12	+	1938	7	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	0	65	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_3	229.472341591651	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTCATATTTCTTCTGT	NA	False	NA	79	True	ATTAAA	-14	NA	72132630	72148300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132958_72136088_72136181_72136729_72136885_72140729_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.15	chr12	+	1907	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	1	72	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTTCTGTCTACTGA	NA	False	NA	86	True	ATTAAA	-21	NA	72132631	72148307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132650_72132687_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.16	chr12	+	1297	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	1	-6	1	6	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132631	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.17	chr12	+	1240	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132631	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132659_72132697_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.18	chr12	+	1159	6	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	6	241	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	259.045478632614	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTATGTTGTCAATAA	NA	False	NA	NA	False	CATAAA	-30	NA	72132636	72141882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459
ES.7783.19	chr12	+	4362	6	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	38	-19	intron_retention	FALSE	canonical	3	527	junction_2	75.3567515223421	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-4	NA	72132668	72147612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.2	chr12	+	1980	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	6	65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTCATATTTCTTCTGT	NA	False	NA	79	True	ATTAAA	-14	NA	72132568	72148300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132686_72132724_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.20	chr12	+	1914	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	40	-662	40	62	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACGACTCATATTTCTTC	NA	False	NA	76	True	ATTAAA	-11	NA	72132670	72148297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.21	chr12	+	1760	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	40	-508	40	-92	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCTGTTTAGAGACAG	NA	False	NA	-78	True	AATAAA	-18	NA	72132670	72148143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.22	chr12	+	1239	7	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	40	6	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_3	229.472341591651	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132670	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132958_72136088_72136181_72136729_72136885_72140729_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.23	chr12	+	1212	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	40	622	40	-18	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-5	NA	72132670	72147613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.24	chr12	+	980	5	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	44	-17	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	292.110424326144	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	72132674	72147614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72132958_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.25	chr12	+	1822	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	45	7	45	-7	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCATGTTCTGA	NA	False	NA	7	True	AATAAA	-13	NA	72132675	72148228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.26	chr12	+	6339	6	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	101	6	intron_retention	FALSE	canonical	3	51	junction_3	284.823875403731	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132731	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132958_72136106_72136181_72136729_72136885_72140729_72140918_72141459_72146898_72147383
ES.7783.27	chr12	+	3769	6	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	198	-2466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	294.624778319815	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGCGTCTAATCCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	72132828	72145165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72142143
ES.7783.28	chr12	+	3352	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	249	-2309	249	1709	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAGTATTGAGTCACTT	NA	False	NA	NA	False	ATTAAA	-18	NA	72132879	72149944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.29	chr12	+	4682	5	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	250	-17	intron_retention	FALSE	canonical	3	51	junction_1	270.496187588661	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	72132880	72147614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72136885_72140729_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.3	chr12	+	1272	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	6	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	72132568	72147614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132682_72132724_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.30	chr12	+	10493	4	NIC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	251	-7	intron_retention	FALSE	canonical	3	527	junction_1	89.8443097808648	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCATGTTCTGA	NA	False	NA	7	True	AATAAA	-13	NA	72132881	72148228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72136885_72140710_72140918_72141459_72146898_72147383
ES.7783.31	chr12	+	4844	6	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	252	-18	intron_retention	FALSE	canonical	3	493	junction_1	85.7563991781371	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-5	NA	72132882	72147613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72132958_72136088_72136181_72136729_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.32	chr12	+	6888	6	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	252	69	intron_retention	FALSE	canonical	3	493	junction_1	90.9426192717144	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATTTCTTCTGTCTAC	NA	False	NA	83	True	ATTAAA	-18	NA	72132882	72148304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72146898_72147383
ES.7783.33	chr12	+	6196	6	NIC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	254	-17	intron_retention	FALSE	canonical	3	493	junction_1	90.9426192717144	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	72132884	72147614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72146898_72147383
ES.7783.34	chr12	+	5715	7	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	260	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	238.800241950371	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132890	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72142143_72146898_72147383
ES.7783.35	chr12	+	4733	6	NIC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	283	-7	intron_retention	FALSE	canonical	3	527	junction_2	75.3567515223421	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACTCCATGTTCTGA	NA	False	NA	7	True	AATAAA	-13	NA	72132913	72148228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.4	chr12	+	2926	7	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	-22	-2474	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	310.029792475211	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTTATAAGTAAGCGTC	NA	False	NA	NA	False	ATTAAA	-18	NA	72132608	72145157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132686_72132724_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72143159
ES.7783.5	chr12	+	1986	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-22	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCTCATATTCAATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	72132608	72148345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132650_72132687_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.6	chr12	+	1254	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-22	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	229.071061071468	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-6	NA	72132608	72147614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132659_72132697_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.7	chr12	+	1264	8	NNC	ENSMUSG00000005078.17	novel	1874	7	NA	NA	-22	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	267.673422708512	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132608	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132650_72132687_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7783.9	chr12	+	1282	8	NNC	ENSMUSG00000005078.17	novel	1292	7	NA	NA	-22	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.071061071468	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCGAAAAGTATTCTTCAT	NA	False	NA	NA	False	TATAAA	-33	NA	72132608	72147641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72132650_72132687_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ES.7784.1	chr12	+	2648	3	Antisense	novelGene_ENSMUSG00000113976.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	72162733	72173516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_72163497_72168656_72168754_72171728
ES.7785.1	chr12	-	1520	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	25	-1	-13	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTCTCTCTGTCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	72283473	72258525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ES.7785.2	chr12	-	2818	9	NNC	ENSMUSG00000021087.19	novel	3629	9	NA	NA	-77664	-197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.5941722939444	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACGCACAGTACTT	NA	False	NA	NA	False	AATAAA	-4	NA	72361162	72258723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72350430_72351193_72354929_72355704_72361031
ES.7785.3	chr12	-	3009	9	FSM	ENSMUSG00000021087.19	ENSMUST00000078505.14	3629	9	114	506	114	31	multi-exon	FALSE	canonical	0	0	junction_6	26.5941722939444	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGATGGTGAGAGCCC	NA	False	NA	NA	False	NA	NA	NA	72455714	72259031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72350430_72351193_72354929_72355704_72455084
ES.7785.4	chr12	-	1030	7	FSM	ENSMUSG00000021087.19	ENSMUST00000137990.2	1008	7	9	-31	9	31	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGATGGTGAGAGCCC	NA	False	NA	NA	False	NA	NA	NA	72283489	72259031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ES.7785.5	chr12	-	5737	6	ISM	ENSMUSG00000021087.19	ENSMUST00000150156.2	1428	7	7306	506	7306	31	3prime_fragment	FALSE	canonical	3	47	junction_2	4.67332857821917	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGATGGTGAGAGCCC	NA	False	NA	NA	False	NA	NA	NA	72275207	72259031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105
ES.7785.6	chr12	-	1137	3	ISM	ENSMUSG00000021087.19	ENSMUST00000137990.2	1008	7	80	6294	42	4650	5prime_fragment	FALSE	canonical	3	55	junction_2	3	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCCAACCATAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	72283418	72265356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72266170_72270105_72270314_72283302
ES.7786.1	chr12	+	3635	25	NIC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	101	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_18	3.4990077958695	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGTGTCGAAATTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	72489123	72544013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822
ES.7786.2	chr12	+	2394	16	FSM	ENSMUSG00000021090.17	ENSMUST00000161957.2	2520	16	112	14	112	-14	multi-exon	FALSE	canonical	2	5	junction_7	2.95897880282295	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTCTTAAGTTACTTC	NA	False	NA	NA	False	AATAAA	-12	NA	72489134	72520970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570
ES.7786.3	chr12	+	3897	13	ISM	ENSMUSG00000021090.17	ENSMUST00000161957.2	2520	16	112	5090	112	1594	5prime_fragment	FALSE	canonical	2	5	junction_7	3.27766007321619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAAGGTCATATT	NA	False	NA	NA	False	AATAAA	-12	NA	72489134	72515894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631
ES.7786.4	chr12	+	4441	25	NIC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	122	830	intron_retention	FALSE	canonical	1	1	junction_18	3.60531051213192	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCTTTGTCATTGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	72489144	72544843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510609_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822
ES.7786.5	chr12	+	4511	32	NIC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	143	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	3.98148681435235	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCCATCTCATTTGA	NA	False	NA	NA	False	AATAAA	-25	NA	72489165	72557332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550300_72553059_72553201_72555744_72555817_72557109
ES.7786.6	chr12	+	4286	21	NNC	ENSMUSG00000021090.17	novel	2520	16	NA	NA	143	9593	intron_retention	FALSE	canonical	0	0	junction_17	3.78021163428716	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTTTTTTGTTCTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	72489165	72534028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72489245_72496093_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510725_72513631_72513765_72515942_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525433_72525556_72528201_72528337_72529719_72529846_72532944
ES.7786.7	chr12	+	2310	2	NIC	ENSMUSG00000021090.17	novel	2413	13	NA	NA	11833	5319	intron_retention	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGAGCTCAGTTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	72500855	72506859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72502913_72506606
ES.7786.8	chr12	+	2973	5	ISM	ENSMUSG00000021090.17	ENSMUST00000161195.9	3750	25	25522	19338	-8619	240	internal_fragment	FALSE	canonical	2	4	junction_4	1.4790199457749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAAAGAAATTTGAATG	NA	False	NA	NA	False	TATAAA	-16	NA	72514228	72524675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72516066_72516996_72517101_72520570_72520784_72522816_72522937_72523976
ES.7786.9	chr12	+	4588	8	NNC	ENSMUSG00000021090.17	novel	3817	25	NA	NA	-613	-1	intron_retention	FALSE	canonical	0	0	junction_2	2.32115382989599	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAGGTGTCGAAATTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	72522234	72544012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72522937_72523976_72524169_72525433_72528337_72529719_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822
ES.7787.1	chr12	-	175	1	Intergenic	novelGene_6426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAAGTTACT	NA	False	NA	NA	False	NA	NA	NA	72518234	72518059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72518100_72518200
ES.7788.1	chr12	+	2867	1	Genic_Genomic	ENSMUSG00000021090.17	novel	NA	NA	NA	NA	-7163	1460	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAGTAGAACAAATAAG	NA	False	NA	NA	False	AATAAA	-11	NA	72559701	72562568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_72559700_72562600
ES.7789.1	chr12	-	159	1	Intergenic	novelGene_6427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAAATTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72578681	72578522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72578500_72578700
ES.779.1	chr1	-	2290	7	Fusion	ENSMUSG00000006538.13_ENSMUSG00000026162.9	novel	2468	3	NA	NA	-25	7	multi-exon	FALSE	canonical	0	0	junction_1	14.7309198626562	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACCTACTGAGCAGTT	NA	False	NA	NA	False	AATAAA	-28	NA	75101869	74984466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_74985907_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75097876_75097971_75101779
ES.779.2	chr1	-	1929	7	NIC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-33	-209	intron_retention	FALSE	canonical	3	10	junction_6	9.3526585643988	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTTACCTGTGATCTC	NA	False	NA	-2	True	AATAAA	-23	NA	75101877	75006506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75006928_75007327_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
ES.779.3	chr1	-	1402	8	FSM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	-28	212	-28	-212	multi-exon	FALSE	canonical	3	10	junction_7	8.89622712968015	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGGTTACCTGTGAT	NA	False	NA	-5	True	AATAAA	-20	NA	75101872	75006509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
ES.779.4	chr1	-	1509	9	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-42	-213	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	10.6183802907977	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGGTTACCTGTGA	NA	False	NA	-6	True	AATAAA	-19	NA	75101886	75006510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75097876_75097971_75101779
ES.779.5	chr1	-	793	4	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	89001	-214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.8162545173751	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTGAGGTTACCTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	75012843	75006511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75012691
ES.779.6	chr1	-	1222	7	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-33	-215	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.0775771705315	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTTGAGGTTACCTGT	NA	False	NA	-8	True	AATAAA	-17	NA	75101877	75006512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75094701_75094915_75097219_75097397_75097876_75097971_75101779
ES.779.7	chr1	-	1984	8	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	-2	-217	intron_retention	FALSE	canonical	3	9	junction_6	11.3064908213768	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGACTGTTGAGGTTACCT	NA	False	NA	-10	True	AATAAA	-15	NA	75101846	75006514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75006928_75007327_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75097876_75097971_75101779
ES.7790.1	chr12	+	4594	12	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-212	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.07574135356002	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	72582944	72626893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72584069_72584152_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ES.7790.10	chr12	+	4293	11	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.5781156459971	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAATTTTGTTCTTTGTG	NA	False	NA	NA	False	AATAAA	-10	NA	72583154	72626887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616600_72620270_72621277_72622127_72622315_72626077
ES.7790.11	chr12	+	3417	8	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	0	-11423	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	29.3097462372126	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATATCTCCTGCTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	72583156	72615470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72614233
ES.7790.12	chr12	+	3987	10	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	1	4075	1	-4075	5prime_fragment	FALSE	canonical	2	9	junction_2	25.603819159562	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGTTTGGAGCCTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	72583157	72622818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127
ES.7790.14	chr12	+	2645	7	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	7	-11445	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.24115687671741	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72583163	72615448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72614233
ES.7790.15	chr12	+	4269	7	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	15	10755	15	-10755	5prime_fragment	FALSE	canonical	3	9	junction_2	30.1754130966845	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCACTGTTCTGTGTG	NA	False	NA	NA	False	TATAAA	-13	NA	72583171	72616138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670
ES.7790.16	chr12	+	3077	7	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	5042	-11423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	7.56453714527348	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATATCTCCTGCTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	72588198	72615470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72613842_72614173
ES.7790.17	chr12	+	3131	1	Intergenic	novelGene_6428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTACTTGTTTGTCTTT	NA	False	NA	NA	False	AAGAAA	-31	NA	72592981	72596112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72593000_72596100
ES.7790.2	chr12	+	1065	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-49	37886	-49	-37886	5prime_fragment	FALSE	canonical	3	96	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGAGAGTTAGGTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	72583107	72589007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72583314_72588148
ES.7790.3	chr12	+	4247	12	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.423603270079	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	72583122	72626893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72613825_72613911_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ES.7790.4	chr12	+	678	2	ISM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-32	38256	-32	-38256	5prime_fragment	FALSE	canonical	3	96	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGGCTAGTGTGTGG	NA	False	NA	17	True	AATACA	-16	NA	72583124	72588637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72583314_72588148
ES.7790.5	chr12	+	4325	11	FSM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	-25	0	-25	0	multi-exon	FALSE	canonical	2	9	junction_2	24.633513756669	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	72583131	72626893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ES.7790.6	chr12	+	3581	8	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-25	-11284	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	29.3097462372126	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCTGCTCATATTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	72583131	72615609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72614233
ES.7790.7	chr12	+	3046	10	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-18	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	27.6115023446461	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	72583138	72626893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72613825_72613979_72614035_72622127_72622315_72626077
ES.7790.8	chr12	+	5213	5	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-5	-13710	intron_retention	FALSE	non_canonical	0	0	junction_4	37.8483817355511	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATCCTGGTCACCTAA	NA	False	NA	NA	False	AATAAA	-14	NA	72583151	72613183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72604252_72610689
ES.7790.9	chr12	+	3264	9	NNC	ENSMUSG00000034501.8	novel	4300	11	NA	NA	-2	-11423	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.7054001888146	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATATCTCCTGCTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	72583154	72615470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72613825_72613979_72614035_72614233
ES.7791.1	chr12	-	3523	1	Genic_Genomic	ENSMUSG00000109482.3	novel	NA	NA	NA	NA	30653	1085	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGCTGTAGCTCAGGG	3747	False	NA	NA	False	NA	NA	NA	72625213	72621690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_72621700_72625200
ES.7792.1	chr12	+	157	2	Intergenic	novelGene_6429	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	72661219	72819373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72661344_72819340
ES.7792.10	chr12	+	2409	7	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-23115	252	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	166.029113912791	489	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGATAGATGTGTG	NA	False	NA	11	True	ATTAAA	-26	NA	72781113	72841590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72781169_72782668_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.11	chr12	+	2006	7	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-23108	220	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	166.72707238678	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGCTTGTTGTGTGA	NA	False	NA	NA	False	GATAAA	-3	NA	72781120	72840856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72781169_72782330_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.12	chr12	+	4124	4	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-23103	74	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	193.282752003955	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGAGATCCTTGCTTT	NA	False	NA	11	True	AATAAA	-16	NA	72781125	72836248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72781169_72782330_72782755_72830456_72831311_72833445
ES.7792.13	chr12	+	2665	6	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-21751	372	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	142.380335720913	491	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72782477	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.14	chr12	+	2062	6	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-21533	-13	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	142.380335720913	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72782695	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.15	chr12	+	2315	6	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-33	261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	147.008026991726	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGTGTGTGTGTTGAA	NA	False	NA	20	True	ATTAAA	-35	NA	72807481	72841599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72807544_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.16	chr12	+	2486	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	-74	5256	-74	-1	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAATCATGTATGCGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	72807910	72841337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.17	chr12	+	3946	4	NNC	ENSMUSG00000021096.12	novel	3900	3	NA	NA	-46	74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.818908259269	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGAGATCCTTGCTTT	NA	False	NA	11	True	AATAAA	-16	NA	72807938	72836248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808110_72808287_72808406_72830456_72831311_72833445
ES.7792.18	chr12	+	2835	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-115	1180	-11	-1180	multi-exon	FALSE	canonical	3	365	junction_1	26.5	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATATCCAGTTTTTGG	NA	False	NA	NA	False	AATAAA	-22	NA	72807973	72834994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.19	chr12	+	2798	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	-9	4879	-9	376	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	8	True	AATAAA	-16	NA	72807975	72841714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.2	chr12	+	177	1	Intergenic	novelGene_6430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGCAAAAAAGAGCTG	NA	False	NA	NA	False	NA	NA	NA	72695250	72695427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72695200_72695400
ES.7792.20	chr12	+	4083	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-106	-77	-2	77	multi-exon	FALSE	canonical	3	365	junction_1	26.5	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	NA	False	NA	14	True	AATAAA	-19	NA	72807982	72836251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.21	chr12	+	2391	6	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	2	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	138.620921941819	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72807986	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72830456_72831304_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.23	chr12	+	9140	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-83	-5157	21	-7	multi-exon	FALSE	canonical	3	365	junction_1	26.5	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGACATGTAATCATGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	72808005	72841331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.24	chr12	+	3351	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	33	4284	33	971	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAGAGTTGGGAGTATGG	NA	False	NA	NA	False	AATAAA	-20	NA	72808017	72842309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.25	chr12	+	6475	5	NIC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	33	252	intron_retention	FALSE	canonical	3	340	junction_3	28.6650920110158	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGTGATAGATGTGTG	NA	False	NA	11	True	ATTAAA	-26	NA	72808017	72841590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72808406_72830456_72831311_72833445_72837516_72839551_72839610_72840485
ES.7792.26	chr12	+	3350	6	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	43	372	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	137.438568094986	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72808027	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72830456_72831919_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.27	chr12	+	3477	4	NNC	ENSMUSG00000021096.12	novel	3900	3	NA	NA	43	77	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	185.818908259269	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	NA	False	NA	14	True	AATAAA	-19	NA	72808027	72836251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72830456_72830568_72831128_72831311_72833445
ES.7792.28	chr12	+	2924	7	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	45	372	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	169.394673929128	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72808029	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72839727_72839912_72840485
ES.7792.29	chr12	+	2623	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	49	4996	49	259	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGATGTGTGTGTGTTG	NA	False	NA	18	True	ATTAAA	-33	NA	72808033	72841597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.3	chr12	+	611	1	Intergenic	novelGene_6431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCAGGTCCCTGCGCCCT	NA	False	NA	NA	False	NA	NA	NA	72695500	72696111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72695500_72696100
ES.7792.30	chr12	+	7624	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	49	-5	49	5	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATGATTGTTTG	NA	False	NA	8	True	AATAAA	-19	NA	72808033	72846598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.31	chr12	+	5711	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	50	1907	50	-1907	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATAAACTGGGCATTGGT	NA	False	NA	NA	False	NA	NA	NA	72808034	72844686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.32	chr12	+	3072	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	51	4545	51	710	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCCTTAAAGACAGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	72808035	72842048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.33	chr12	+	2431	7	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	52	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	170.17833783025	485	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACAAGACATGTAATCA	NA	False	NA	NA	False	AATAAA	-11	NA	72808036	72841326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72820841_72820924_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.34	chr12	+	3166	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-41	775	-41	-775	multi-exon	FALSE	canonical	3	365	junction_1	26.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCATTGATTTGCTG	NA	False	NA	NA	False	AATACA	-29	NA	72808047	72835399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.35	chr12	+	3213	5	ISM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	73	5258	-31	-3	intron_retention	FALSE	canonical	3	299	junction_3	43.095823463533	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTAATCATGTATGCGT	NA	False	NA	NA	False	AATAAA	-20	NA	72808057	72841335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551
ES.7792.36	chr12	+	1947	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-31	1984	-31	-1984	multi-exon	FALSE	canonical	3	365	junction_1	26.5	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGCATTTAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	72808057	72834190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.37	chr12	+	2602	5	NIC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	-30	372	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	166.760869210975	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72808058	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72808406_72830456_72831311_72833445_72833564_72839551_72839610_72840485
ES.7792.38	chr12	+	2299	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	-28	1629	-28	-1629	multi-exon	FALSE	canonical	3	365	junction_1	26.5	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTATTTTCTCCATTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	72808060	72834545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445
ES.7792.39	chr12	+	2931	6	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	-27	-13	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	137.438568094986	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72808061	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808406_72830456_72831919_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.4	chr12	+	162	1	Intergenic	novelGene_6432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72708371	72708533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72708400_72708500
ES.7792.40	chr12	+	2470	7	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	-22	375	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	137.56897260001	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGCTGTTGGCCTTTAA	NA	False	NA	7	True	AATAAA	-15	NA	72808066	72841713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72808089_72808324_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.41	chr12	+	6147	5	NIC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	-8	-13	intron_retention	FALSE	canonical	3	340	junction_3	28.6650920110158	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72808080	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72808406_72830456_72831311_72833445_72837516_72839551_72839610_72840485
ES.7792.42	chr12	+	2833	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	96	4739	-8	516	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTGTGTCTCCGTCTC	NA	False	NA	NA	False	NA	NA	NA	72808080	72841854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.44	chr12	+	6471	5	NIC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	53	372	intron_retention	FALSE	canonical	3	340	junction_3	28.6650920110158	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72808141	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72808406_72830456_72831311_72833445_72837516_72839551_72839610_72840485
ES.7792.45	chr12	+	4362	5	NIC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	69	-13	intron_retention	FALSE	canonical	3	299	junction_2	26.3675937468704	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72808157	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_72808406_72830456_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.46	chr12	+	3976	2	ISM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	75	1984	75	-1984	intron_retention	FALSE	canonical	3	365	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGCATTTAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	72808163	72834190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72808406_72830456
ES.7792.47	chr12	+	2170	6	NNC	ENSMUSG00000021096.12	novel	7668	6	NA	NA	298	372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	175.602505676884	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTAGCTGTTGGCCTT	NA	False	NA	4	True	AATAAA	-12	NA	72830774	72841710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72839727_72839852_72840485
ES.7792.48	chr12	+	5445	2	ISM	ENSMUSG00000021096.12	ENSMUST00000221628.2	1486	6	30005	-376	1046	376	intron_retention	FALSE	canonical	3	340	junction_1	0	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTGTTGGCCTTTAAA	NA	False	NA	8	True	AATAAA	-16	NA	72834233	72841714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72837516_72839551
ES.7792.49	chr12	+	2964	2	ISM	ENSMUSG00000021096.12	ENSMUST00000221628.2	1486	6	32097	13	-1573	-13	intron_retention	FALSE	canonical	3	340	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAACAAGACATGTAATC	NA	False	NA	NA	False	AATAAA	-10	NA	72836325	72841325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_72837516_72839551
ES.7792.5	chr12	+	1830	1	Antisense	novelGene_ENSMUSG00000021094.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-35	NA	72711663	72713493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_72711700_72713500
ES.7792.6	chr12	+	207	1	Intergenic	novelGene_6433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCTCTTTCCAAAGTAA	3582	False	NA	NA	False	NA	NA	NA	72739459	72739666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72739500_72739700
ES.7792.7	chr12	+	2182	7	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-31152	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	168.586690525149	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGACATGTAATCATGTA	7820	False	NA	NA	False	AATAAA	-15	NA	72773076	72841330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72773189_72782668_72782755_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.8	chr12	+	3576	8	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-24141	967	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	175.643075001317	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATAGAGTTGGGAGT	NA	False	NA	NA	False	AATAAA	-16	NA	72780087	72842305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72780141_72781052_72781169_72782330_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ES.7792.9	chr12	+	3875	4	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-23165	77	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	192.101246453241	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGATCCTTGCTTTTTG	NA	False	NA	14	True	AATAAA	-19	NA	72781063	72836251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_72781169_72782668_72782779_72830456_72831311_72833445
ES.7793.1	chr12	-	1994	7	NIC	ENSMUSG00000109482.3	novel	2344	8	NA	NA	4	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.687184270936277	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTTCGTTCTTAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	72696431	72652564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72653694_72655691_72655769_72658489_72658706_72659313_72659437_72666195_72666436_72668621_72668729_72696329
ES.7794.1	chr12	-	1381	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	3	1	3	-1	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGACTGCAGACTTAG	NA	False	NA	42	True	AATAAA	-15	NA	72711680	72697127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
ES.7794.2	chr12	-	1392	7	FSM	ENSMUSG00000021094.11	ENSMUST00000221750.2	1308	7	-142	58	13	-1	multi-exon	FALSE	canonical	0	0	junction_5	42.7528426605244	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCTTTGTACAAGAG	NA	False	NA	-15	True	AATAAA	-17	NA	72711670	72697184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706039_72706271_72711402
ES.7795.1	chr12	-	191	1	Intergenic	novelGene_6434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGAGTGGAAACTTGT	NA	False	NA	NA	False	NA	NA	NA	72762599	72762408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72762400_72762600
ES.7796.1	chr12	-	200	1	Intergenic	novelGene_6435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGGGAACTGAATGATCA	NA	False	NA	NA	False	NA	NA	NA	72773797	72773597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72773600_72773800
ES.7797.1	chr12	-	326	1	Intergenic	novelGene_6436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	72779409	72779083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72779100_72779400
ES.7798.1	chr12	-	3454	1	Genic_Genomic	ENSMUSG00000112989.2	novel	NA	NA	NA	NA	466	2892	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTGTCTCAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	72787890	72784436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_72784400_72787900
ES.7799.1	chr12	+	6065	1	Antisense	novelGene_ENSMUSG00000021098.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	2406	False	NA	NA	False	AATACA	-18	NA	72948199	72954264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_72948200_72954300
ES.78.1	chr1	-	2837	1	Antisense	novelGene_ENSMUSG00000046101.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9992708	9989871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_9989900_9992700
ES.780.1	chr1	+	3719	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-1164	6	-1156	0	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75118265	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ES.780.10	chr1	+	3454	6	NIC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	22	0	intron_retention	FALSE	canonical	3	93	junction_4	6.91664658631623	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119459	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75119773_75120012_75120120_75120566_75121084_75121265_75121748_75121902_75122460_75123073
ES.780.11	chr1	+	4033	5	NNC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	24	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	42.9148866944793	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCTGCCTGTCTGCC	NA	False	NA	7	True	AATAAA	-14	NA	75119461	75124549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75119773_75120012_75121492_75121537_75121748_75121902_75122460_75123073
ES.780.12	chr1	+	2486	9	NNC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	55	0	intron_retention	FALSE	non_canonical	0	0	junction_8	35.6403475712569	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119492	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123079
ES.780.13	chr1	+	2106	8	NIC	ENSMUSG00000049339.17	novel	2438	10	NA	NA	43	-3	intron_retention	FALSE	canonical	0	0	junction_2	46.7812975014414	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAACTGCTGCCTGTCTGC	NA	False	NA	6	True	AATAAA	-13	NA	75119868	75124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75120120_75120566_75120598_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
ES.780.2	chr1	+	2548	10	NNC	ENSMUSG00000049339.17	novel	2438	10	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.9476721505974	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119366	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123433
ES.780.3	chr1	+	2496	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	-60	2	-44	0	multi-exon	FALSE	canonical	3	9	junction_9	31.2054126359159	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119377	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
ES.780.4	chr1	+	2573	9	NIC	ENSMUSG00000049339.17	novel	2477	9	NA	NA	-28	0	intron_retention	FALSE	canonical	0	0	junction_3	46.007981644493	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119393	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75119773_75120012_75120120_75120566_75120598_75121035_75121084_75121195_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ES.780.5	chr1	+	2908	8	NIC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	-22	-3	intron_retention	FALSE	canonical	3	93	junction_6	5.87627537177232	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAACTGCTGCCTGTCTGC	NA	False	NA	6	True	AATAAA	-13	NA	75119399	75124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75122460_75123073
ES.780.6	chr1	+	2940	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	-5	-374	3	374	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTAGTATCCAAGATTT	NA	False	NA	NA	False	TATAAA	-16	NA	75119424	75124931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ES.780.7	chr1	+	2471	9	FSM	ENSMUSG00000049339.17	ENSMUST00000188873.7	2477	9	4	2	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	35.7840746701658	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGCCTGTCTGCCTG	NA	False	NA	9	True	AATAAA	-16	NA	75119425	75124551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75121035_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ES.780.8	chr1	+	2896	8	NIC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	7	0	intron_retention	FALSE	canonical	3	93	junction_5	9.03056035958806	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTGCCTGCTTGTC	NA	False	NA	15	True	AATAAA	-22	NA	75119444	75124557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75119773_75120012_75120120_75120566_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ES.780.9	chr1	+	3577	6	NNC	ENSMUSG00000049339.17	novel	2561	9	NA	NA	7	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	42.2061606877479	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGCTGCCTGTCTGCCT	NA	False	NA	8	True	AATAAA	-15	NA	75119444	75124550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75119773_75120012_75120120_75120566_75121084_75121265_75121492_75121537_75122460_75123073
ES.7800.1	chr12	-	2440	8	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-331	927	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	11.2739540896851	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTACTGACAGATTTTT	NA	False	NA	NA	False	NA	NA	NA	72953578	72926955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72949186_72949264_72952964
ES.7800.10	chr12	-	1793	8	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-560	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	9.58740670603572	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAATTATTTGATTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	72953807	72927879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72949989_72950109_72952958
ES.7800.11	chr12	-	1712	16	NNC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	53	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	11.0082797122085	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAATTATTTGATTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	72964481	72927879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72949186_72949264_72949989_72950109_72952958_72953054_72954594_72954716_72956544_72956588_72956677_72956866_72959958_72960049_72963447_72963505_72963596_72963654_72964441
ES.7800.12	chr12	-	1797	7	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-683	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.0196598214019	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAATTATTTGATTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	72953930	72927879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72952958
ES.7800.13	chr12	-	2447	9	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-1152	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	9.31396800509858	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAATTATTTGATTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	72954399	72927879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72941757_72941820_72945260_72945308_72945483_72945570_72949989_72950109_72952958
ES.7800.14	chr12	-	1885	17	NIC	ENSMUSG00000021098.15	novel	1988	19	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	9.98670991868693	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGAATTATTTGATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	72964665	72927881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72941757_72941820_72945260_72945308_72945483_72945570_72949989_72950109_72952964_72953057_72954594_72954716_72956544_72956588_72956677_72956866_72959958_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964559
ES.7800.15	chr12	-	1604	10	NNC	ENSMUSG00000021098.15	novel	1988	19	NA	NA	-2085	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1432867461164	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTATTATTTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	72955332	72928007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_72928080_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72949186_72949264_72949989_72950109_72952964_72953057_72954594
ES.7800.16	chr12	-	179	1	Intergenic	novelGene_6438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAATCAAAATGT	6179	False	NA	NA	False	NA	NA	NA	72933590	72933411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72933400_72933600
ES.7800.17	chr12	-	3381	6	FSM	ENSMUSG00000021098.15	ENSMUST00000132016.2	466	6	-2708	-207	-2506	99	multi-exon	FALSE	canonical	3	14	junction_4	10.1271911209377	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTGTTTGCTT	NA	False	NA	NA	False	AATATA	-39	NA	72955753	72939490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_72939754_72945260_72945308_72945483_72945570_72949186_72949264_72949989_72950109_72952964
ES.7800.18	chr12	-	4236	3	ISM	ENSMUSG00000021098.15	ENSMUST00000143960.8	503	5	3635	-92	3629	92	3prime_fragment	FALSE	canonical	3	27	junction_1	6.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCCTGTTTTTTGTTTG	NA	False	NA	NA	False	AATATA	-32	NA	72949416	72939497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72939754_72945260_72945308_72945483
ES.7800.19	chr12	-	2068	2	ISM	ENSMUSG00000021098.15	ENSMUST00000132901.8	790	7	9670	-138	9468	84	3prime_fragment	FALSE	canonical	3	15	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTCTACTCCCTGTTT	1877	False	NA	NA	False	AATATA	-24	NA	72943577	72939505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72939754_72941757
ES.7800.2	chr12	-	2619	1	Genic_Genomic	ENSMUSG00000021098.15	novel	NA	NA	NA	NA	23459	915	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTGATGCATAATTAC	9282	False	NA	NA	False	NA	NA	NA	72929586	72926967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_72927000_72929600
ES.7800.20	chr12	-	3044	1	NIC	ENSMUSG00000021098.15	novel	1988	19	NA	NA	-683	2121	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAGAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	72953930	72950886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72950900_72953900
ES.7800.21	chr12	-	3212	1	NIC	ENSMUSG00000021098.15	novel	1988	19	NA	NA	-1035	1937	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTCAAGCCGGGCATG	NA	False	NA	NA	False	NA	NA	NA	72954282	72951070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72951100_72954300
ES.7800.22	chr12	-	1847	4	NIC	ENSMUSG00000021098.15	novel	1939	8	NA	NA	8	4	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	11.7756811551038	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTATTTTGCCTACAT	NA	False	NA	NA	False	AATAAA	-25	NA	72964672	72958428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964559
ES.7800.23	chr12	-	2008	5	ISM	ENSMUSG00000021098.15	ENSMUST00000044000.12	2051	18	46	30552	-3	-2	5prime_fragment	FALSE	canonical	3	18	junction_2	8.16624148553054	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGGGTATTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	72964634	72958434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964481
ES.7800.24	chr12	-	1925	4	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	9.42809041582063	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTATGGGTATTTTGC	NA	False	NA	NA	False	AATAAA	-19	NA	72964678	72958434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72960049_72963447_72963505_72963596_72963654_72964481
ES.7800.26	chr12	-	2000	5	ISM	ENSMUSG00000021098.15	ENSMUST00000131033.8	1939	8	-78	5432	-29	-7	5prime_fragment	FALSE	canonical	3	10	junction_4	10.280442597476	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAATGTGTATGGGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	72964709	72958439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964559
ES.7800.3	chr12	-	2989	5	NNC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	11991	903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.17877987534291	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGACTGCATATTTTG	4400	False	NA	NA	False	NA	NA	NA	72941054	72926979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939334_72939431_72939577
ES.7800.4	chr12	-	2635	16	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-3	844	combination_of_known_splicesites	TRUE	canonical	0	0	junction_13	10.7360245073408	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATATTGCTTAATTT	NA	False	NA	NA	False	ATTAAA	-9	NA	72964634	72927038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72941757_72941820_72945260_72945308_72945483_72945570_72949186_72949264_72949989_72950109_72952964_72953057_72954594_72954716_72956544_72956588_72956677_72956866_72963447_72963505_72963596_72963654_72964481
ES.7800.5	chr12	-	421	1	Intergenic	novelGene_6437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGGAACATTTAATGTT	NA	False	NA	NA	False	AATAAA	-22	NA	72927579	72927158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_72927200_72927600
ES.7800.6	chr12	-	2328	8	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-968	130	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	9.58740670603572	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCTTTCATAAATTC	NA	False	NA	NA	False	ATTAAA	-25	NA	72954215	72927752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939577_72939754_72945260_72945308_72945483_72945570_72949989_72950109_72952958
ES.7800.7	chr12	-	3562	1	Genic_Genomic	ENSMUSG00000021098.15	novel	NA	NA	NA	NA	21721	120	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGTCAATACTTCTT	8445	False	NA	NA	False	ATTAAA	-15	NA	72931324	72927762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_72927800_72931300
ES.7800.8	chr12	-	4723	2	NIC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	16021	8	intron_retention	FALSE	canonical	3	16	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTGATTGAAGTTAT	8430	False	NA	NA	False	ATTAAA	-23	NA	72937024	72927874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_72932055_72936481
ES.7800.9	chr12	-	7058	8	NNC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	-2071	8	intron_retention	FALSE	canonical	0	0	junction_3	13.0462286363781	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTGATTGAAGTTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	72955318	72927874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_72928199_72931996_72932055_72936481_72936621_72939334_72939431_72939577_72939754_72945260_72945308_72945483_72945570_72949186
ES.7801.1	chr12	+	172	1	Intergenic	novelGene_6439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTGATGTAGG	NA	False	NA	NA	False	NA	NA	NA	72982119	72982291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_72982100_72982300
ES.7802.1	chr12	-	159	1	Intergenic	novelGene_6440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	9210	False	NA	NA	False	NA	NA	NA	73037677	73037518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73037500_73037700
ES.7803.1	chr12	+	177	1	Intergenic	novelGene_6441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATATAGATACTGAAAGG	4973	False	NA	NA	False	NA	NA	NA	73044313	73044490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73044300_73044500
ES.7804.1	chr12	+	179	1	Intergenic	novelGene_6442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAGAAGAAATG	3123	False	NA	NA	False	NA	NA	NA	73047655	73047834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73047700_73047800
ES.7805.1	chr12	-	153	1	Intergenic	novelGene_6443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	73071832	73071679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73071700_73071800
ES.7806.1	chr12	+	157	1	Intergenic	novelGene_6444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73072842	73072999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73072800_73073000
ES.7807.1	chr12	+	1370	1	Antisense	novelGene_ENSMUSG00000051367.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGGAACCTCATGCAAAA	6534	False	NA	NA	False	NA	NA	NA	73093018	73094388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_73093000_73094400
ES.7808.1	chr12	-	3576	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	516	-776	516	776	multi-exon	FALSE	canonical	3	15	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCACCCGATCCAGAAT	9111	False	NA	NA	False	CATAAA	-15	NA	73093437	73087824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73090604_73092640
ES.7808.2	chr12	-	2874	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	440	2	440	-2	multi-exon	FALSE	canonical	3	15	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCGTATTGTTTTTGA	9035	False	NA	NA	False	AATATA	-12	NA	73093513	73088602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73090604_73092640
ES.7808.3	chr12	-	2846	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	338	132	338	-132	multi-exon	FALSE	canonical	3	15	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGGCTTGCTCATGCT	8933	False	NA	NA	False	ATTAAA	-18	NA	73093615	73088732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73090604_73092640
ES.7809.1	chr12	-	2791	2	Intergenic	novelGene_6445	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73116707	73111687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73114119_73116347
ES.7809.2	chr12	-	195	1	Intergenic	novelGene_6446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCCACTGTCCTGA	1200	False	NA	NA	False	NA	NA	NA	73112258	73112063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73112100_73112300
ES.7809.3	chr12	-	159	1	Intergenic	novelGene_6447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATCTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	73114367	73114208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73114200_73114400
ES.781.1	chr1	-	2500	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	109	-547	109	547	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATAACCTTTGAGGTTT	7015	False	NA	NA	False	NA	NA	NA	75118226	75111864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ES.781.3	chr1	-	1919	9	NIC	ENSMUSG00000033159.15	novel	3669	9	NA	NA	-46	7	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	51.6876133614235	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCTTCTGTAGCATTC	6860	False	NA	-6	True	AATAAA	-24	NA	75118381	75112404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118343
ES.781.4	chr1	-	2452	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	-13	-10	1	7	multi-exon	TRUE	canonical	3	17	junction_9	47.8820567438857	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCTTCTGTAGCATTC	9295	False	NA	-6	True	AATAAA	-24	NA	75119354	75112404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
ES.781.5	chr1	-	3846	6	NIC	ENSMUSG00000033159.15	novel	2429	10	NA	NA	26	2	intron_retention	FALSE	canonical	3	148	junction_3	10.5261578935526	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTTTCCTTCTGTAG	9334	False	NA	-11	True	AATAAA	-19	NA	75119315	75112409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541
ES.781.6	chr1	-	2491	9	NNC	ENSMUSG00000033159.15	novel	2429	10	NA	NA	27	0	intron_retention	FALSE	canonical	0	0	junction_7	55.4660650758642	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	9335	False	NA	-16	True	AATAAA	-14	NA	75119314	75112414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118052_75118148_75118701
ES.781.7	chr1	-	3504	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	-1445	3	-425	0	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	8869	False	NA	-16	True	AATAAA	-14	NA	75119780	75112414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ES.781.8	chr1	-	1896	9	NIC	ENSMUSG00000033159.15	novel	2429	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	50.7222830716442	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	9338	False	NA	-16	True	AATAAA	-14	NA	75119311	75112414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75119286
ES.7810.1	chr12	+	6046	1	Intergenic	novelGene_6448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	73121349	73127395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73121300_73127400
ES.7811.1	chr12	+	135	1	Intergenic	novelGene_6449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73143166	73143301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73143200_73143300
ES.7812.1	chr12	+	1241	8	NNC	ENSMUSG00000021103.13	novel	3688	7	NA	NA	-11545	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.958727230745	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73158945	73319625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73159029_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ES.7812.2	chr12	+	1386	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	-16	1135	-16	2	multi-exon	FALSE	non_canonical	0	0	junction_6	110.46488037344	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	73170474	73319627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ES.7812.4	chr12	+	1101	6	NIC	ENSMUSG00000021103.13	novel	2505	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	123.606795929674	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73170490	73319625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73265794_73265917_73319187
ES.7812.5	chr12	+	1356	8	NNC	ENSMUSG00000021103.13	novel	2505	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	135.958727230745	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73170491	73319625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73170701_73214784_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ES.7812.6	chr12	+	175	1	Intergenic	novelGene_6451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAGAACACAGTAA	8046	False	NA	NA	False	NA	NA	NA	73220126	73220301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73220100_73220300
ES.7813.11	chr12	-	1923	3	FSM	ENSMUSG00000034460.10	ENSMUST00000175693.3	6817	3	32	4862	1	-4862	multi-exon	FALSE	canonical	3	77	junction_2	8.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTCAAGCAGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	73160198	73155076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73156124_73159116_73159932_73160137
ES.7813.2	chr12	-	6250	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-22	1	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGTTGAAGAAAGATTA	NA	False	NA	0	True	AATAAA	-19	NA	73160252	73146381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
ES.7813.4	chr12	-	5270	2	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	439	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTTTGTGTTGAAGAAA	NA	False	NA	-5	True	AATAAA	-14	NA	73159760	73146386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73151013_73159116
ES.7813.5	chr12	-	4931	1	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	8878	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATACTTTGTGTTGAA	NA	False	NA	-9	True	AATAAA	-10	NA	73151321	73146390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73146400_73151300
ES.7813.6	chr12	-	3915	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	2	1553	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTCAACTGAAGCTCAT	NA	False	NA	NA	False	AATAAA	-28	NA	73160197	73148661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
ES.7813.7	chr12	-	3065	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-1	700	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCTGAGTAAGTACAGT	NA	False	NA	NA	False	AATACA	-12	NA	73160200	73149514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
ES.7813.8	chr12	-	2793	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	-13	385	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	73160243	73149829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
ES.7814.1	chr12	-	153	2	Antisense	novelGene_ENSMUSG00000021103.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	73184880	73183309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_73183340_73184757
ES.7815.1	chr12	-	223	1	Intergenic	novelGene_6450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCATGCCAAACAACAAG	4780	False	NA	NA	False	NA	NA	NA	73198501	73198278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73198300_73198500
ES.7816.1	chr12	-	157	1	Intergenic	novelGene_6452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	73241141	73240984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73241000_73241100
ES.7817.1	chr12	-	170	1	Intergenic	novelGene_6453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAATCTAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73245011	73244841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73244800_73245000
ES.7818.1	chr12	-	215	1	Intergenic	novelGene_6454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAAAGAGCTTACACTAG	NA	False	NA	NA	False	NA	NA	NA	73308949	73308734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73308700_73308900
ES.7819.1	chr12	-	6416	4	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-7	3067	intron_retention	TRUE	non_canonical	0	0	junction_1	46.5689453033528	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTATCCTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	73333491	73323717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73325991_73326042_73329511_73331408_73332050_73333457
ES.7819.10	chr12	-	2263	6	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	28	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.3459130022148	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGGATTTTGTAATTC	NA	False	NA	-15	True	AATAAA	-12	NA	73333455	73326793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677_73332750_73333295
ES.7819.11	chr12	-	3032	3	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-19	89	intron_retention	FALSE	canonical	3	70	junction_2	21.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATAGACTGATTTTT	NA	False	NA	-6	True	AGTAAA	-22	NA	73333503	73327165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73329511_73331408_73332050_73333457
ES.7819.12	chr12	-	1060	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-27	88	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	38.0029238641216	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTATAGACTGATTTT	NA	False	NA	-7	True	AGTAAA	-21	NA	73333511	73327166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73327407_73329385_73329511_73331408_73332050_73333457
ES.7819.13	chr12	-	3387	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	32	88	intron_retention	FALSE	canonical	3	14	junction_3	43.2229362980145	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTATAGACTGATTTT	NA	False	NA	-7	True	AGTAAA	-21	NA	73333451	73327166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73327407_73327778_73329511_73331408_73332050_73332677
ES.7819.14	chr12	-	2505	6	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	32	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.4516953404286	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGTATAGACTGATTT	NA	False	NA	-8	True	AGTAAA	-20	NA	73333451	73327167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332152_73332227_73332677
ES.7819.15	chr12	-	1705	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	29	87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.1124981878805	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGTATAGACTGATTT	NA	False	NA	-8	True	AGTAAA	-20	NA	73333454	73327167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333406
ES.7819.16	chr12	-	1724	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	6	85	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	37.7160443312922	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATATTGTATAGACTGAT	NA	False	NA	-10	True	AGTAAA	-18	NA	73333477	73327169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327729_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.17	chr12	-	1706	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-28	388	-27	82	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGATATTGTATAGACT	NA	False	NA	-13	True	AGTAAA	-15	NA	73333511	73327172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.19	chr12	-	1790	6	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	18	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	44.3459130022148	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGGATATTGTATAGA	NA	False	NA	-15	True	AGTAAA	-13	NA	73333465	73327174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677_73332750_73333397
ES.7819.2	chr12	-	4334	4	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-29	3067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.9983164553722	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTATCCTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	73333513	73323717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73325991_73326042_73327407_73331408_73332050_73333457
ES.7819.20	chr12	-	2650	4	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-27	71	intron_retention	FALSE	canonical	3	70	junction_3	17.6823829464998	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAGGAACTTGGATA	NA	False	NA	-24	True	AGTAAA	-4	NA	73333511	73327183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73327407_73327778_73329511_73331408_73332050_73333457
ES.7819.21	chr12	-	1828	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	29	-243	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.7458098596952	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAACAAATCCT	NA	False	NA	NA	False	AATAAA	-25	NA	73333454	73327497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73328431_73329385_73329511_73331408_73332050_73332677_73332750_73333397
ES.7819.22	chr12	-	1756	4	ISM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-31	713	-30	-243	5prime_fragment	FALSE	canonical	3	66	junction_1	21.2759645296439	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAACAAATCCT	NA	False	NA	NA	False	AATAAA	-25	NA	73333514	73327497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.23	chr12	-	1077	4	ISM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-31	1392	-30	-922	5prime_fragment	FALSE	canonical	3	66	junction_1	21.2759645296439	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCTTTAACATGGATG	NA	False	NA	NA	False	AATAAA	-15	NA	73333514	73328176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.3	chr12	-	4517	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-87	3067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.0645832840843	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTATCCTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	73333571	73323717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73325991_73326042_73327407_73329385_73329511_73331408_73332050_73333457
ES.7819.4	chr12	-	5680	3	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	1816	3067	intron_retention	FALSE	canonical	3	96	junction_1	8.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTATCCTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	73331667	73323717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73327407_73327778_73329511_73331408
ES.7819.5	chr12	-	5461	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-34	3040	intron_retention	FALSE	non_canonical	0	0	junction_1	40.3879623155217	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTTGAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-21	NA	73333518	73323744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73325991_73326042_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.6	chr12	-	2143	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-71	-6	-70	6	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAGGTATTTCTATTT	NA	False	NA	0	True	AATAAA	-27	NA	73333554	73326778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ES.7819.7	chr12	-	2871	5	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-27	-3	intron_retention	FALSE	canonical	3	14	junction_4	37.6056844107377	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTTGTAATTCAAGGTA	NA	False	NA	-9	True	AATAAA	-18	NA	73333511	73326787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677
ES.7819.8	chr12	-	1596	5	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	-12	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	42.2751404492049	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTTTGTAATTCAAGG	NA	False	NA	-11	True	AATAAA	-16	NA	73333496	73326789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73327778_73327953_73329385_73329511_73331408_73332050_73333457
ES.7819.9	chr12	-	2682	4	NNC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	48.0578355271599	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTTTGTAATTCAAG	NA	False	NA	-12	True	AATAAA	-15	NA	73333452	73326790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_73327407_73329385_73329511_73331408_73332050_73332152
ES.782.1	chr1	-	4401	2	Antisense	novelGene_ENSMUSG00000049339.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGGAAGGGCATACAGGA	9219	False	NA	NA	False	NA	NA	NA	75124684	75120237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75121492_75121537
ES.782.2	chr1	-	3896	1	Antisense	novelGene_ENSMUSG00000049339.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGGAAGGGCATACAGGA	9770	False	NA	NA	False	NA	NA	NA	75124133	75120237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75120200_75124100
ES.7820.1	chr12	+	2995	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	33	4	22	-4	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	4	True	NA	NA	NA	73333585	73400819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.2	chr12	+	3064	16	NNC	ENSMUSG00000044712.16	novel	3032	16	NA	NA	-13	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.4389541478323	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	4	True	NA	NA	NA	73333617	73400819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73383795_73383879_73384283_73384343_73386647_73386828_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.3	chr12	+	3830	7	NIC	ENSMUSG00000044712.16	novel	2244	8	NA	NA	-1	5355	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	6.02771377334171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTGCTTATTGCTGGT	NA	False	NA	NA	False	AATAAA	-21	NA	73333629	73380007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73333807_73335166_73335298_73338933_73339008_73340472_73340574_73356918_73356972_73365750_73365791_73376753
ES.7820.4	chr12	+	1623	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	85	1324	7	860	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGCAGAGTCACTCTT	NA	False	NA	NA	False	NA	NA	NA	73333637	73399499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.5	chr12	+	3035	17	NIC	ENSMUSG00000044712.16	novel	3032	16	NA	NA	16	-4	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	4.37142711251143	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTATGCTGGTTTTTT	NA	False	NA	4	True	NA	NA	NA	73333646	73400819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73333807_73335166_73335298_73338933_73339008_73340472_73340574_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.6	chr12	+	2736	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	116	180	0	-180	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTTTCCTACCAGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	73333668	73400643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.7	chr12	+	2807	15	NNC	ENSMUSG00000044712.16	novel	725	5	NA	NA	731	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.02087479165428	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGCTGTTTGTATGCT	NA	False	NA	-4	True	NA	NA	NA	73334564	73400811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73334686_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7820.8	chr12	+	2808	1	Intergenic	novelGene_6455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTGCAGAGCTAAACAA	NA	False	NA	NA	False	NA	NA	NA	73349899	73352707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73349900_73352700
ES.7820.9	chr12	+	1373	14	NNC	ENSMUSG00000044712.16	novel	3032	16	NA	NA	-8466	872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.22397749118451	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTTTGTTTGGAAGT	3790	False	NA	NA	False	NA	NA	NA	73356936	73399511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73386647_73386778_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ES.7821.1	chr12	-	177	1	Intergenic	novelGene_6456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	73390870	73390693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73390700_73390900
ES.7822.1	chr12	+	4042	1	NIC	ENSMUSG00000113425.2	novel	2263	2	NA	NA	2875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTACTTATCATGTTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	73404729	73408771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73404700_73408800
ES.7823.1	chr12	-	3183	1	FSM	ENSMUSG00000034435.7	ENSMUST00000042975.7	2991	1	-198	6	-198	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTATCACATTACTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	73593364	73590181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73590200_73593400
ES.7823.2	chr12	-	2808	1	FSM	ENSMUSG00000034435.7	ENSMUST00000042975.7	2991	1	-171	354	-171	-354	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACCGTGTTGATTGTCTG	NA	False	NA	NA	False	AATATA	-44	NA	73593337	73590529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_73590500_73593300
ES.7824.1	chr12	+	3718	14	FSM	ENSMUSG00000021108.19	ENSMUST00000021527.15	3545	14	-173	0	-172	0	multi-exon	FALSE	canonical	1	3	junction_1	3.36532966988113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGAGAAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-24	NA	73631397	73824959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73632300_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
ES.7824.2	chr12	+	2920	14	NNC	ENSMUSG00000021108.19	novel	3634	15	NA	NA	-31123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.74481890604249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAATTTTGTGAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	73664571	73824950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73664685_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
ES.7824.3	chr12	+	3014	14	NNC	ENSMUSG00000021108.19	novel	3634	15	NA	NA	-31123	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.36532966988113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTTTGTGAGAAGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	73664571	73824954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73664775_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
ES.7824.4	chr12	+	2933	11	NNC	ENSMUSG00000021108.19	novel	3634	15	NA	NA	46446	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.22492603485552	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAATTTTGTGAGAA	180	False	NA	NA	False	AATAAA	-15	NA	73742140	73824950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73742517_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
ES.7825.1	chr12	-	3514	1	Intergenic	novelGene_6457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCACCAGTTCGATG	NA	False	NA	NA	False	NA	NA	NA	73764171	73760657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73760700_73764200
ES.7826.1	chr12	+	4192	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	-121	-611	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGTCTCAACATTTC	8237	False	NA	47	True	TTTAAA	-2	NA	73954556	73993693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.12	chr12	+	5101	13	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	57	-639	intron_retention	FALSE	canonical	3	113	junction_1	115.0155484658	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8415	False	NA	19	True	AATAAA	-19	NA	73954734	73993665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684
ES.7826.14	chr12	+	4674	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	69	61	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTTGATTCTTTTTCTC	8427	False	NA	72	True	TTTAAA	-14	NA	73954746	73994365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.15	chr12	+	4063	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	72	-645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	183.080989971348	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCCCCCTGGGTCAGC	8430	False	NA	13	True	AATAAA	-13	NA	73954749	73993659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73959397_73959453_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988733_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.16	chr12	+	4699	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	73	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	158.314230426565	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATATGCATATCTTT	8431	False	NA	4	True	AATAAA	-15	NA	73954750	73994297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73959397_73959453_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.18	chr12	+	3832	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	73	819	73	-819	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTCAATAAGTGAGTAA	8431	False	NA	NA	False	NA	NA	NA	73954750	73993485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.19	chr12	+	3992	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	73	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	146.245966279625	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTGGGTCAGCGCTT	8431	False	NA	17	True	AATAAA	-17	NA	73954750	73993663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977451_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.2	chr12	+	4185	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-40	579	-40	-579	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATTTCTCAAAAATTTAAG	8318	False	NA	79	True	CATAAA	-2	NA	73954637	73993725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.20	chr12	+	4144	14	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	73	-380	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	126.807826462214	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGTATTTGCAGTATG	8431	False	NA	NA	False	ATTAAA	-15	NA	73954750	73993924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73992325
ES.7826.21	chr12	+	4483	14	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	73	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	151.013420775896	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCATATCTTTCTAGT	8431	False	NA	9	True	AATAAA	-20	NA	73954750	73994302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73992325
ES.7826.23	chr12	+	3874	14	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	82	-641	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	126.807826462214	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTGGGTCAGCGCTT	8440	False	NA	17	True	AATAAA	-17	NA	73954759	73993663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73992325
ES.7826.26	chr12	+	4002	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	97	-638	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	162.820910478012	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTCAGCGCTTACG	8455	False	NA	20	True	AATAAA	-20	NA	73954774	73993666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73959397_73959453_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.28	chr12	+	4080	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.668360646917	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCCTGGGTCAGCGCT	8457	False	NA	16	True	AATAAA	-16	NA	73954776	73993662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73958234_73958374_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.29	chr12	+	4518	14	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	127.276291735224	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGCATATCTTTCTAG	8457	False	NA	8	True	AATAAA	-19	NA	73954776	73994301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990982_73992322
ES.7826.3	chr12	+	4829	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-35	-70	-35	70	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTCTCTGTTTTTCT	8323	False	NA	81	True	TTTAAA	-23	NA	73954642	73994374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.34	chr12	+	3915	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	170.658045129279	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTGGGTCAGCGCTT	8457	False	NA	17	True	AATAAA	-17	NA	73954776	73993663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973470_73974759_73974906_73975007_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.37	chr12	+	3866	14	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	101	-644	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	129.657217627251	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCCCCTGGGTCAGCG	8459	False	NA	14	True	AATAAA	-14	NA	73954778	73993660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.38	chr12	+	2784	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	102	-1796	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTTGTTCAGTTGTT	8460	False	NA	NA	False	NA	NA	NA	73954779	73992508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.40	chr12	+	1650	6	FSM	ENSMUSG00000021109.14	ENSMUST00000110464.8	1759	6	104	5	104	-5	multi-exon	FALSE	canonical	3	317	junction_1	64.6424009455095	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTACTGCTCCCAGACAG	8462	False	NA	NA	False	AATAAA	-19	NA	73954781	73979845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047
ES.7826.41	chr12	+	6519	14	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	105	-377	intron_retention	FALSE	canonical	0	0	junction_3	137.681091077303	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATTTGCAGTATGAAT	8463	False	NA	NA	False	ATTAAA	-18	NA	73954782	73993927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73977310_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.43	chr12	+	4614	14	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	106	-639	intron_retention	FALSE	canonical	1	1	junction_4	132.079140700884	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8464	False	NA	19	True	AATAAA	-19	NA	73954783	73993665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975110_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.45	chr12	+	2713	14	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	106	2419	106	-2419	5prime_fragment	FALSE	canonical	3	312	junction_10	61.9020986920896	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAGGGACAGTGGTTTT	8464	False	NA	NA	False	TATAAA	-22	NA	73954783	73991885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684
ES.7826.46	chr12	+	4534	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	123.46432683168	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8464	False	NA	11	True	AATAAA	-22	NA	73954783	73994304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979106_73979189_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.47	chr12	+	3803	14	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	108	-644	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	133.626123300807	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCCCCTGGGTCAGCG	8466	False	NA	14	True	AATAAA	-14	NA	73954785	73993660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73992325
ES.7826.49	chr12	+	3316	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	115	-1254	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	110.208707385912	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGGCCTATGG	8473	False	NA	NA	False	TATAAA	-14	NA	73954792	73993050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.5	chr12	+	4435	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-15	304	-15	-304	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTGCATGTCTAAT	8343	False	NA	NA	False	NA	NA	NA	73954662	73994000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.50	chr12	+	3880	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	116	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	134.723318133794	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCCTGGGTCAGCGCT	8474	False	NA	16	True	AATAAA	-16	NA	73954793	73993662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986346_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.51	chr12	+	3487	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	116	1121	116	-1121	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTATGTGGCATTTATT	8474	False	NA	NA	False	TATAAA	-19	NA	73954793	73993183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.52	chr12	+	5207	14	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	116	-639	intron_retention	FALSE	canonical	3	312	junction_9	62.3235497390112	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGGTCAGCGCTTAC	8474	False	NA	19	True	AATAAA	-19	NA	73954793	73993665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.53	chr12	+	4763	16	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	116	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	158.821996797253	547	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGCATATCTTTCTAG	8474	False	NA	8	True	AATAAA	-19	NA	73954793	73994301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73980983_73981142_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.54	chr12	+	6622	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	117	-2015	117	2015	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCGTTCCTCTGAACGC	8475	False	NA	NA	False	GATAAA	-15	NA	73954794	73996319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.55	chr12	+	4156	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	124	444	124	-444	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTTTTTTAGAATT	8482	False	NA	NA	False	NA	NA	NA	73954801	73993860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.56	chr12	+	4069	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	210	-386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	133.493407312565	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAACCTTCAGTATTTGC	8568	False	NA	NA	False	ATTAAA	-9	NA	73954887	73993918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990945_73991684_73991812_73992325
ES.7826.59	chr12	+	4560	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	402	-638	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	125.613596040413	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTCAGCGCTTACG	8760	False	NA	20	True	AATAAA	-20	NA	73955079	73993666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987965_73988144_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.6	chr12	+	4324	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	-15	-373	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCAGTATGAATGGAG	8343	False	NA	NA	False	ATTAAA	-22	NA	73954662	73993931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.60	chr12	+	4138	15	Fusion	ENSMUSG00000114046.2_ENSMUSG00000021109.14	novel	445	3	NA	NA	590	-377	multi-exon	FALSE	canonical	0	0	junction_1	133.282594512562	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATTTGCAGTATGAAT	8948	False	NA	NA	False	ATTAAA	-18	NA	73955267	73993927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_73955522_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.61	chr12	+	4014	16	Fusion	ENSMUSG00000114046.2_ENSMUSG00000021109.14	novel	445	3	NA	NA	625	-645	multi-exon	FALSE	canonical	0	0	junction_1	158.474056762193	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCCCCCTGGGTCAGC	8983	False	NA	13	True	AATAAA	-13	NA	73955302	73993659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_73955518_73955776_73955915_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.62	chr12	+	4143	15	Fusion	ENSMUSG00000114046.2_ENSMUSG00000021109.14	novel	445	3	NA	NA	630	-374	multi-exon	FALSE	canonical	0	0	junction_1	125.877835983293	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGCAGTATGAATGGA	8988	False	NA	NA	False	ATTAAA	-21	NA	73955307	73993930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_73955522_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.63	chr12	+	3853	15	Fusion	ENSMUSG00000114046.2_ENSMUSG00000021109.14	novel	445	3	NA	NA	650	-640	multi-exon	FALSE	canonical	0	0	junction_1	125.877835983293	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTGGGTCAGCGCTTA	9008	False	NA	18	True	AATAAA	-18	NA	73955327	73993664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_73955518_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.64	chr12	+	4187	15	Fusion	ENSMUSG00000114046.2_ENSMUSG00000021109.14	novel	445	3	NA	NA	670	-641	multi-exon	FALSE	canonical	0	0	junction_1	133.282594512562	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCTGGGTCAGCGCTT	9028	False	NA	17	True	AATAAA	-17	NA	73955347	73993663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_73955915_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.65	chr12	+	6171	10	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	2184	-637	intron_retention	FALSE	canonical	3	332	junction_2	48.8378521484016	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTCAGCGCTTACGT	NA	False	NA	21	True	AATAAA	-21	NA	73975559	73993667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.66	chr12	+	187	1	Intergenic	novelGene_6459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	73983098	73983285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_73983100_73983300
ES.7826.67	chr12	+	1661	8	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	29807	1739	41	-1739	3prime_fragment	FALSE	canonical	3	312	junction_3	60.4641907855132	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTGGTGGCTCAGCAG	NA	False	NA	NA	False	NA	NA	NA	73984484	73992565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.68	chr12	+	5884	1	NIC	ENSMUSG00000021109.14	novel	4385	15	NA	NA	3335	-642	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCCTGGGTCAGCGCT	NA	False	NA	16	True	AATAAA	-16	NA	73987778	73993662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_73987800_73993700
ES.7826.7	chr12	+	4050	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	-9	-642	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	146.641187103426	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCCCTGGGTCAGCGCT	8349	False	NA	16	True	AATAAA	-16	NA	73954668	73993662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986346_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ES.7826.8	chr12	+	2332	9	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	-7	7091	-7	558	intron_retention	FALSE	canonical	3	317	junction_1	62.0865071895658	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGTCTCCTTTACCTTC	8351	False	NA	NA	False	ATTAAA	-11	NA	73954670	73987213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302
ES.7827.1	chr12	-	4390	1	Intergenic	novelGene_6458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCCACGGAACGCGGC	NA	False	NA	NA	False	NA	NA	NA	73959520	73955130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_73955100_73959500
ES.7828.1	chr12	-	8751	2	NIC	ENSMUSG00000087700.3	novel	1451	7	NA	NA	-27	1	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTTTACTGTATA	NA	False	NA	NA	False	AATAAA	-12	NA	73996615	73973253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_73981787_73996397
ES.7829.1	chr12	+	5449	8	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	-15	279	intron_retention	FALSE	canonical	3	65	junction_3	13.2956951756605	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTCTAGTGTGTGA	NA	False	NA	4	True	AATAAA	-16	NA	74011239	74031160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74021936_74029251
ES.7829.10	chr12	+	7565	9	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-11	4	-11	-4	intron_retention	FALSE	canonical	3	65	junction_3	12.4373429638327	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	74011288	74035736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251
ES.7829.11	chr12	+	6173	9	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	28.297250308113	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTGTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	74011290	74035734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ES.7829.12	chr12	+	7518	11	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	37.0109443273203	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTATTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	74011293	74035740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014120_74014212_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74029490
ES.7829.13	chr12	+	5978	7	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	1	286	intron_retention	FALSE	canonical	3	65	junction_3	14.3575377028545	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTGTGTGAAATTTTC	NA	False	NA	11	True	AATAAA	-23	NA	74011300	74031167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74021936_74029251
ES.7829.14	chr12	+	2816	9	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	14	286	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	27.4018133524043	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTGTGTGAAATTTTC	NA	False	NA	11	True	AATAAA	-23	NA	74011313	74031167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029406
ES.7829.15	chr12	+	2818	10	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	16	283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	36.2092683040007	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAGTGTGTGAAATT	NA	False	NA	8	True	AATAAA	-20	NA	74011315	74031164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016311_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74029490
ES.7829.16	chr12	+	2916	11	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	16	279	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	37.0109443273203	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTCTAGTGTGTGA	NA	False	NA	4	True	AATAAA	-16	NA	74011315	74031160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014120_74014212_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74029490
ES.7829.17	chr12	+	2867	10	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	40	283	intron_retention	FALSE	canonical	0	0	junction_8	35.5176881685662	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAGTGTGTGAAATT	NA	False	NA	8	True	AATAAA	-20	NA	74011339	74031164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74019374_74021784_74021936_74029251_74029354_74029490_74030116_74030636
ES.7829.18	chr12	+	3780	1	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	1680	1986	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGATTGTCATTAAAG	NA	False	NA	NA	False	NA	NA	NA	74012979	74016759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74013000_74016800
ES.7829.19	chr12	+	5830	9	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	3394	212	-2333	-212	3prime_fragment	FALSE	canonical	3	65	junction_2	12.2551009787761	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATTGTGCTGGCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	74014693	74035528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ES.7829.2	chr12	+	1751	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-46	4570	-1	289	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTGAAATTTTCATG	NA	False	NA	14	True	AATAAA	-26	NA	74011253	74031170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ES.7829.3	chr12	+	2882	10	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	7	282	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	28.0981524808929	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCTAGTGTGTGAAAT	NA	False	NA	7	True	AATAAA	-19	NA	74011261	74031163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74029490
ES.7829.4	chr12	+	6459	11	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	34.1607962436475	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTATTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	74011267	74035740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74026245_74026398_74029251_74029354_74030636
ES.7829.6	chr12	+	9993	8	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	17	-4	intron_retention	FALSE	canonical	3	65	junction_3	13.2956951756605	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTTTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	74011271	74035736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74021936_74029251
ES.7829.7	chr12	+	6404	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-28	-101	17	101	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCCTGTCTGATCTTTG	NA	False	NA	NA	False	ATTAAA	-23	NA	74011271	74035841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ES.7829.8	chr12	+	1526	10	NNC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	19	276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7408643620842	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATCTTCTAGTGTG	NA	False	NA	1	True	AATAAA	-13	NA	74011273	74031157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_74011336_74014688_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ES.7829.9	chr12	+	2990	9	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	-14	4582	-14	277	intron_retention	FALSE	canonical	3	65	junction_3	12.4373429638327	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATCTTCTAGTGTGT	NA	False	NA	2	True	AATAAA	-14	NA	74011285	74031158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251
ES.783.1	chr1	+	1216	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	-17	7	-17	-3	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2015	False	NA	9	True	AGTAAA	-15	NA	75145272	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ES.783.10	chr1	+	1285	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	28	3	17	-3	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2069	False	NA	9	True	AGTAAA	-15	NA	75145326	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ES.783.11	chr1	+	1172	9	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	41	junction_8	44.3727112085795	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	2088	False	NA	16	True	AGTAAA	-22	NA	75145345	75148273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
ES.783.12	chr1	+	1760	7	NIC	ENSMUSG00000026197.13	novel	1316	9	NA	NA	36	-3	intron_retention	FALSE	canonical	3	127	junction_6	18.9333626760336	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2123	False	NA	9	True	AGTAAA	-15	NA	75145380	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75147244_75147329_75147398_75147619_75147693_75147879
ES.783.13	chr1	+	1304	7	ISM	ENSMUSG00000026197.13	ENSMUST00000161106.8	1285	9	382	3	100	-3	3prime_fragment	FALSE	canonical	3	127	junction_6	20.4674538393682	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2414	False	NA	9	True	AGTAAA	-15	NA	75145671	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147398_75147619_75147693_75147879
ES.783.14	chr1	+	1244	7	NNC	ENSMUSG00000026197.13	novel	882	3	NA	NA	125	-4	intron_retention	FALSE	canonical	0	0	junction_1	63.9782949305639	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGTATGAGTGCTGTT	2439	False	NA	8	True	AGTAAA	-14	NA	75145696	75148265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75145716_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147398_75147619_75147693_75147879
ES.783.2	chr1	+	1113	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	2024	False	NA	16	True	AGTAAA	-22	NA	75145281	75148273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
ES.783.5	chr1	+	1183	10	NNC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	-3	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	62.0330457533088	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2038	False	NA	9	True	AGTAAA	-15	NA	75145295	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147626_75147693_75147879
ES.783.6	chr1	+	2198	5	NIC	ENSMUSG00000026197.13	novel	1316	9	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	127	junction_4	23.1354706025185	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2049	False	NA	9	True	AGTAAA	-15	NA	75145306	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145924_75146143_75146276_75146408_75147398_75147619_75147693_75147879
ES.783.7	chr1	+	1469	7	NIC	ENSMUSG00000026197.13	novel	1316	9	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	127	junction_6	18.915748876414	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2050	False	NA	9	True	AGTAAA	-15	NA	75145307	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147398_75147619_75147693_75147879
ES.783.8	chr1	+	1705	8	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	3	-3	intron_retention	FALSE	canonical	3	87	junction_1	31.8029648213586	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2055	False	NA	9	True	AGTAAA	-15	NA	75145312	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75147244_75147329_75147398_75147619_75147693_75147879
ES.783.9	chr1	+	1255	9	FSM	ENSMUSG00000026197.13	ENSMUST00000161106.8	1285	9	27	3	7	-3	multi-exon	FALSE	canonical	3	39	junction_1	45.8732969711138	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	2059	False	NA	9	True	AGTAAA	-15	NA	75145316	75148266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147398_75147619_75147693_75147879
ES.7830.1	chr12	-	640	3	NNC	ENSMUSG00000113031.2	novel	636	3	NA	NA	73	452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCATGACTAAAAGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	74363863	74360522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_74360908_74362065_74362187_74363729
ES.7831.1	chr12	+	3460	6	Intergenic	novelGene_6460	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTGTAAACTTCTAG	NA	False	NA	NA	False	AATAAA	-16	NA	74369015	74567273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_74369345_74371863_74372074_74554648_74555663_74556846_74557038_74560502_74560638_74565692
ES.7832.1	chr12	+	7696	2	Antisense	novelGene_ENSMUSG00000021051.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTATGGCTTTAAAGCAAA	878	False	NA	NA	False	NA	NA	NA	75522389	75530169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_75522574_75522657
ES.7833.1	chr12	+	3537	1	Antisense	novelGene_ENSMUSG00000021051.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACCAGAAAAGAAATTTAA	7896	False	NA	NA	False	NA	NA	NA	75537159	75540696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_75537200_75540700
ES.7833.2	chr12	+	1429	1	Intergenic	novelGene_6461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7896	False	NA	NA	False	NA	NA	NA	75537159	75538588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75537200_75538600
ES.7834.1	chr12	+	216	1	Intergenic	novelGene_6463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAATATACAGAA	NA	False	NA	NA	False	NA	NA	NA	75560697	75560913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75560700_75560900
ES.7835.1	chr12	-	6282	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-54	-1418	-9	1418	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGCCTGGCTGCTTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	75643028	75496236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.10	chr12	-	5021	15	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	78.9769082758772	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAACCCCTGAATGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	75643000	75497669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75612117_75612321_75639942_75640104_75642408
ES.7835.12	chr12	-	4495	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-21	336	7	-336	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAGTTAGTGAGTGGT	NA	False	NA	NA	False	TATAAA	-21	NA	75642995	75497990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.13	chr12	-	3573	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	16	1221	16	397	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTCTTCCTTCCTTTT	NA	False	NA	NA	False	TATAAA	-12	NA	75642958	75498875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.14	chr12	-	3334	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-73	1549	-28	69	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGCTCTAGCTGGGC	NA	False	NA	53	True	AAAACA	-23	NA	75643047	75499203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.15	chr12	-	3043	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-10	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.7340472572075	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCGTGACCAAATTG	NA	False	NA	-4	True	AATAAA	-26	NA	75643029	75499260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642624
ES.7835.16	chr12	-	3314	15	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	14	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.260230954255	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCGTGACCAAATTG	NA	False	NA	-4	True	AATAAA	-26	NA	75642988	75499260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75631165_75631262_75639942_75640107_75642408
ES.7835.17	chr12	-	2945	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-4	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	55.7340472572075	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCGTGACCAAATTG	NA	False	NA	-4	True	AATAAA	-26	NA	75643006	75499260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642699
ES.7835.19	chr12	-	3064	12	NIC	ENSMUSG00000021051.11	novel	3135	13	NA	NA	-10	12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	59.0374583430156	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCGTGACCAAATTG	NA	False	NA	-4	True	AATAAA	-26	NA	75643029	75499260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75562375_75562573_75639942_75640107_75642408
ES.7835.2	chr12	-	6181	13	FSM	ENSMUSG00000021051.11	ENSMUST00000220035.2	3135	13	-10	-3036	-10	1418	multi-exon	FALSE	canonical	0	0	junction_10	57.382428107876	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGCCTGGCTGCTTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	75643029	75496236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75562375_75562573_75639942_75640107_75642408
ES.7835.20	chr12	-	4171	1	NIC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	93014	9	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCATCGTGACCAAA	NA	False	NA	-7	True	AATAAA	-23	NA	75503434	75499263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75499300_75503400
ES.7835.21	chr12	-	3222	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	50.8484230844725	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCATCGTGACCAAA	NA	False	NA	-7	True	AATAAA	-23	NA	75643010	75499263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506476_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.23	chr12	-	3162	13	NIC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-9	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	57.2981359983803	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCATCGTGACCAAA	NA	False	NA	-7	True	AATAAA	-23	NA	75643028	75499263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.24	chr12	-	3223	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	3	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	55.754215485277	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCATCGTGACCAAA	NA	False	NA	-7	True	AATAAA	-23	NA	75642999	75499263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509197_75511643_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.25	chr12	-	3277	15	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	8	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	69.260230954255	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCATCGTGACCAAA	NA	False	NA	-7	True	AATAAA	-23	NA	75642994	75499263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75586500_75586557_75639942_75640107_75642408
ES.7835.26	chr12	-	3050	13	NIC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-2	8	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	56.7171343892949	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGCATCGTGACCAA	NA	False	NA	-8	True	AATAAA	-22	NA	75643021	75499264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75639942_75640107_75642408
ES.7835.27	chr12	-	3141	13	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	71.351049201972	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGTGCATCGTGACCA	NA	False	NA	-9	True	AATAAA	-21	NA	75643024	75499265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506476_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.3	chr12	-	5733	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-54	-869	-9	869	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTGTCTGGCTTTTGA	NA	False	NA	NA	False	TATAAA	-17	NA	75643028	75496785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.31	chr12	-	1820	11	NIC	ENSMUSG00000021051.11	novel	3135	13	NA	NA	-4	-1045	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	80.3793505820991	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTGGACAGTAGATGG	NA	False	NA	NA	False	AGTAAA	-19	NA	75643006	75500317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75562375_75562573_75642408
ES.7835.32	chr12	-	7025	13	ISM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-53	3712	-8	-2094	5prime_fragment	FALSE	canonical	3	142	junction_8	26.6253586308658	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTAGTTTCAAAATGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	75643027	75501366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.33	chr12	-	155	1	Intergenic	novelGene_6462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	75539163	75539008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75539000_75539200
ES.7835.34	chr12	-	6355	3	FSM	ENSMUSG00000021051.11	ENSMUST00000218930.2	1382	3	24	-4997	-4	4997	multi-exon	FALSE	canonical	3	165	junction_2	10	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATCTTTCCTTGAGTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	75642978	75556951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75562573_75639942_75640107_75642408
ES.7835.35	chr12	-	1325	3	FSM	ENSMUSG00000021051.11	ENSMUST00000218930.2	1382	3	24	33	-4	-33	multi-exon	FALSE	canonical	3	165	junction_2	10	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTAAGGTCTCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	75642978	75561981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75562573_75639942_75640107_75642408
ES.7835.36	chr12	-	3480	1	Intergenic	novelGene_6464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75571540	75568060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75568100_75571500
ES.7835.4	chr12	-	5582	13	FSM	ENSMUSG00000021051.11	ENSMUST00000220035.2	3135	13	38	-2485	-7	867	multi-exon	FALSE	canonical	0	0	junction_10	57.382428107876	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTGTCTGGCTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	75642981	75496787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75562375_75562573_75639942_75640107_75642408
ES.7835.5	chr12	-	5758	1	Genic_Genomic	ENSMUSG00000021051.11	novel	NA	NA	NA	NA	93899	863	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTTTCTTGTTGTCTGGC	NA	False	NA	NA	False	TATAAA	-11	NA	75502549	75496791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_75496800_75502500
ES.7835.7	chr12	-	4865	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-55	0	-10	0	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGGATGCAGGGATA	NA	False	NA	NA	False	AATAAA	-33	NA	75643029	75497654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7835.8	chr12	-	4652	13	NIC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-2	-8	combination_of_known_junctions	FALSE	canonical	1	2	junction_11	56.7171343892949	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAATGTGACTGGATG	NA	False	NA	NA	False	AATAAA	-25	NA	75643021	75497662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75639942_75640107_75642408
ES.7835.9	chr12	-	4834	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	-9	-15	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	50.8484230844725	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAACCCCTGAATGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	75643028	75497669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75500588_75506476_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ES.7836.1	chr12	-	2509	1	Intergenic	novelGene_6465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCTTTTGGTTCCGA	9549	False	NA	NA	False	NA	NA	NA	75659971	75657462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75657500_75660000
ES.7837.1	chr12	+	178	1	Intergenic	novelGene_6466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	75660623	75660801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75660600_75660800
ES.7838.1	chr12	+	182	1	Intergenic	novelGene_6467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75663417	75663599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75663400_75663600
ES.7839.1	chr12	+	177	1	Intergenic	novelGene_6468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCTTCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	75688405	75688582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75688400_75688600
ES.784.1	chr1	+	158	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAAACCA	8423	False	NA	NA	False	NA	NA	NA	75155731	75155889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75155700_75155900
ES.7840.1	chr12	-	3557	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	30	-608	20	608	multi-exon	FALSE	canonical	3	148	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACTAGATGTTCCATTG	6440	False	NA	NA	False	TATAAA	-28	NA	75716281	75676761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75680283_75716245
ES.7840.10	chr12	-	1783	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	-1	1197	-1	-396	multi-exon	FALSE	canonical	3	148	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTAAAATGAGAAAAATATA	6409	False	NA	NA	False	AATAAA	-13	NA	75716312	75678566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75680283_75716245
ES.7840.11	chr12	-	4470	1	Intergenic	novelGene_6469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCATTTCTGATAACT	NA	False	NA	NA	False	AATAAA	-15	NA	75694145	75689675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75689700_75694100
ES.7840.12	chr12	-	2096	1	Intergenic	novelGene_6470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAAAGAGTGGGC	8707	False	NA	NA	False	NA	NA	NA	75707711	75705615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75705600_75707700
ES.7840.13	chr12	-	729	1	NIC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	32	-37370	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGCTCCTGTTTTCTTT	6452	False	NA	NA	False	ATTAAA	-16	NA	75716269	75715540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75715500_75716300
ES.7840.2	chr12	-	2982	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	-1	-2	-1	2	multi-exon	FALSE	canonical	3	148	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTATCTTGTCTTAT	6409	False	NA	0	True	AATAAA	-19	NA	75716312	75677367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75680283_75716245
ES.7840.3	chr12	-	2386	3	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	-97	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	74	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6313	False	NA	-2	True	AATAAA	-17	NA	75716408	75677369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75677656_75678345_75680283_75716245
ES.7840.5	chr12	-	2288	3	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6410	False	NA	-2	True	AATAAA	-17	NA	75716311	75677369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75677670_75678360_75680283_75716245
ES.7840.6	chr12	-	2271	3	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6405	False	NA	-2	True	AATAAA	-17	NA	75716316	75677369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75677661_75678373_75680283_75716245
ES.7840.7	chr12	-	2738	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	1	240	1	-240	multi-exon	FALSE	canonical	3	148	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTGAAGCCTTGTTTA	6411	False	NA	55	True	ATTAAA	-28	NA	75716310	75677609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75680283_75716245
ES.7840.8	chr12	-	2734	3	NNC	ENSMUSG00000045690.9	novel	2979	2	NA	NA	0	-336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	378	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAGAAATG	6410	False	NA	-41	True	AATAAA	-17	NA	75716311	75677705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75680283_75697727_75697819_75716245
ES.7840.9	chr12	-	2162	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	15	802	5	-1	multi-exon	FALSE	canonical	3	148	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAGAG	6425	False	NA	NA	False	NA	NA	NA	75716296	75678171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75680283_75716245
ES.7841.1	chr12	+	3301	1	Intergenic	novelGene_6471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTGCTTTAGTTGG	NA	False	NA	NA	False	NA	NA	NA	75718554	75721855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75718600_75721900
ES.7842.1	chr12	-	176	1	Intergenic	novelGene_6472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAAATATGCCTC	NA	False	NA	NA	False	NA	NA	NA	75752505	75752329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75752300_75752500
ES.7843.1	chr12	+	200	1	Intergenic	novelGene_6473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGGAACAACAACAACAAA	5984	False	NA	NA	False	NA	NA	NA	75756078	75756278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_75756100_75756300
ES.7844.1	chr12	+	173	1	Antisense	novelGene_ENSMUSG00000021054.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAATTTAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	75767349	75767522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_75767300_75767500
ES.7845.1	chr12	-	3359	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	-37	1	-37	-1	multi-exon	FALSE	canonical	3	57	junction_1	0.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTGTTCACATGTCT	NA	False	NA	NA	False	AATAAA	-37	NA	75782540	75761023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75763439_75769425_75769516_75781686
ES.7845.2	chr12	-	3012	4	NNC	ENSMUSG00000021054.7	novel	3323	3	NA	NA	31	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.1088341484633	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTTCTTCTTTTTGCCT	NA	False	NA	NA	False	AATAAA	-22	NA	75782439	75761038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75761433_75761663_75763439_75769425_75769516_75781686
ES.7845.3	chr12	-	3170	2	NIC	ENSMUSG00000021054.7	novel	3323	3	NA	NA	11	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTTTCTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	75782459	75761041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_75763439_75781686
ES.7845.4	chr12	-	2588	3	NNC	ENSMUSG00000021054.7	novel	3323	3	NA	NA	10388	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCTTTCTTCTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	75772082	75761042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_75763439_75769425_75769516_75771980
ES.7845.5	chr12	-	1890	2	FSM	ENSMUSG00000021054.7	ENSMUST00000220285.2	3200	2	1	1309	1	-1309	multi-exon	FALSE	canonical	3	58	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAAAATAGATGG	NA	False	NA	NA	False	AATGAA	-30	NA	75782469	75768408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_75769516_75781686
ES.7845.6	chr12	-	175	1	Intergenic	novelGene_6474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAATCAGCATT	NA	False	NA	NA	False	NA	NA	NA	75778975	75778800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75778800_75779000
ES.7846.1	chr12	-	155	1	Intergenic	novelGene_6475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	75791308	75791153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75791200_75791300
ES.7847.1	chr12	-	156	1	Intergenic	novelGene_6476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAAAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	75819206	75819050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_75819000_75819200
ES.7848.1	chr12	+	4015	23	ISM	ENSMUSG00000063450.15	ENSMUST00000044217.16	21690	116	96971	165303	6071	31710	internal_fragment	FALSE	canonical	0	0	junction_1	1.15350704913177	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAGGTCAGAGTGAAC	1671	False	NA	NA	False	AATAAA	-22	NA	75962062	75992371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698_75969858_75972042_75972255_75972405_75972497_75973229_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059
ES.7848.10	chr12	+	5905	31	NNC	ENSMUSG00000063450.15	novel	5789	31	NA	NA	-79	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.90843431617999	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTGCTTGTGTATTGG	8402	False	NA	NA	False	NA	NA	NA	76095272	76157698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150507_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.11	chr12	+	5569	29	ISM	ENSMUSG00000063450.15	ENSMUST00000139204.8	5789	31	4148	-26	4148	0	3prime_fragment	FALSE	canonical	1	4	junction_8	7.24533629027554	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	NA	False	NA	NA	False	NA	NA	NA	76099499	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.12	chr12	+	4088	19	ISM	ENSMUSG00000063450.15	ENSMUST00000139204.8	5789	31	23434	-26	-4	0	3prime_fragment	FALSE	canonical	2	10	junction_3	5.31391139566588	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	7426	False	NA	NA	False	NA	NA	NA	76118785	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.13	chr12	+	4079	20	ISM	ENSMUSG00000063450.15	ENSMUST00000085280.12	7335	41	40450	20	48	0	3prime_fragment	FALSE	canonical	1	1	junction_10	7.07850712777029	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7478	False	NA	NA	False	AAGAAA	-43	NA	76118837	76157674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76146801_76146871_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.14	chr12	+	3856	19	NNC	ENSMUSG00000063450.15	novel	5789	31	NA	NA	226	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.64905080016763	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	7656	False	NA	NA	False	AAGAAA	-42	NA	76119015	76157673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76119058_76121186_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.15	chr12	+	3818	19	NNC	ENSMUSG00000063450.15	novel	3606	17	NA	NA	2290	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.64905080016763	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9720	False	NA	NA	False	AAGAAA	-43	NA	76121079	76157674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76121108_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.16	chr12	+	3731	18	NNC	ENSMUSG00000063450.15	novel	3606	17	NA	NA	-554	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.19528094440853	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	NA	False	NA	NA	False	NA	NA	NA	76133979	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76134152_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76146801_76146871_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.2	chr12	+	4517	24	ISM	ENSMUSG00000063450.15	ENSMUST00000044217.16	21690	116	104747	148148	13847	48865	internal_fragment	FALSE	canonical	0	0	junction_2	0.930475415610117	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTGTATGGAGTGAAA	9447	False	NA	NA	False	AATATA	-17	NA	75969838	76009526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_75969858_75972042_75972255_75972405_75972497_75973229_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059_75992352_75993451_75993604_75995835_75996146_75997710_75997876_75999457_75999800_76009291
ES.7848.3	chr12	+	11043	48	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	17344	855	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	2.75710531113618	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75973335	76075444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059_75992352_75993451_75993604_75995835_75996146_75997710_75997876_75999457_75999800_76009291_76009448_76010441_76010708_76012423_76014528_76016136_76016460_76018542_76018688_76020050_76020270_76026577_76026841_76028666_76028836_76030733_76030890_76033747_76033889_76035847_76036031_76037138_76037277_76040797_76040984_76042670_76042794_76044177_76044361_76047526_76047659_76051349_76051542_76052146_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729
ES.7848.4	chr12	+	11196	65	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-48918	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_35	6.94662617638052	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	NA	False	NA	NA	False	NA	NA	NA	76020155	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76020270_76026577_76026841_76028666_76028836_76030733_76030890_76033747_76033889_76035847_76036031_76037138_76037277_76040797_76040984_76042670_76042794_76044177_76044361_76047526_76047659_76051349_76051542_76052146_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.5	chr12	+	9417	53	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-17128	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	7.07177383738342	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	2254	False	NA	NA	False	NA	NA	NA	76051945	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.6	chr12	+	2266	11	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-17083	855	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	2.72213151776324	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAGA	2299	False	NA	NA	False	NA	NA	NA	76051990	76075444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729
ES.7848.7	chr12	+	9282	54	NIC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	-16924	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	7.1451412713693	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTTGTGTATTGGAC	2458	False	NA	NA	False	NA	NA	NA	76052149	76157700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76146801_76146871_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155640_76155685_76156595
ES.7848.8	chr12	+	4401	2	NIC	ENSMUSG00000063450.15	novel	7335	41	NA	NA	0	9960	intron_retention	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTAAGTTTTCAAGAAG	6147	False	NA	NA	False	NA	NA	NA	76078387	76084549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76080543_76082303
ES.7848.9	chr12	+	3416	1	NIC	ENSMUSG00000063450.15	novel	21690	116	NA	NA	2727	9941	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	1547	False	NA	NA	False	NA	NA	NA	76081114	76084530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76081100_76084500
ES.7849.1	chr12	-	3066	13	Antisense	novelGene_ENSMUSG00000063450.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAAGATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76070903	76039629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_76040984_76042670_76042792_76044175_76044359_76047524_76047657_76051347_76051540_76052144_76052222_76054904_76055017_76055596_76055714_76062253_76062485_76067107_76067290_76069025_76069155_76069793_76069916_76070789
ES.785.1	chr1	-	2995	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	-27	-2	-27	2	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGGTTTGGTTGTGTG	NA	False	NA	0	True	AATAAA	-17	NA	75157063	75148358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.10	chr1	-	2986	18	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	16	-1	intron_retention	FALSE	canonical	3	123	junction_17	16.1964582398613	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACGGCTGTGGTTTGGTT	NA	False	NA	-5	True	AATAAA	-12	NA	75156914	75148363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.11	chr1	-	4555	13	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	-22	-2	intron_retention	FALSE	canonical	3	125	junction_8	16.5546233891187	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGGCTGTGGTTTGGT	NA	False	NA	-6	True	AATAAA	-11	NA	75156952	75148364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148827_75148909_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154747_75155574
ES.785.13	chr1	-	2739	13	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	1677	-3	intron_retention	FALSE	canonical	3	125	junction_11	15.2970585407784	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACGGCTGTGGTTTGG	NA	False	NA	-7	True	AATAAA	-10	NA	75153916	75148365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151683_75152151_75152262_75152733
ES.785.14	chr1	-	2568	18	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	1	-75	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	36.7841360420475	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTCCCCTCTCTTGCC	NA	False	NA	NA	False	AATAAA	-41	NA	75156929	75148476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.15	chr1	-	2831	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	12	123	-4	-82	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGATATGTCCCCTC	NA	False	NA	NA	False	AATAAA	-34	NA	75157024	75148483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.2	chr1	-	3039	15	NNC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	21	2	intron_retention	TRUE	canonical	0	0	junction_12	49.4248553516408	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGGTTTGGTTGTGTG	NA	False	NA	0	True	AATAAA	-17	NA	75156909	75148358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75149312_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154594_75154747_75155574_75155713_75156213
ES.785.3	chr1	-	3141	18	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	-19	1	intron_retention	FALSE	canonical	3	123	junction_17	15.8487662296931	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGGTTTGGTTGTGT	NA	False	NA	-1	True	AATAAA	-16	NA	75157055	75148359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154747_75155574_75155713_75156213
ES.785.4	chr1	-	2862	19	NNC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.9417292235311	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75156961	75148360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154594_75154747_75155574_75155713_75156213
ES.785.5	chr1	-	3862	16	FSM	ENSMUSG00000026198.16	ENSMUST00000160081.8	3772	16	-88	-2	2	0	multi-exon	FALSE	canonical	3	123	junction_15	17.5722002669621	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75157018	75148360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.6	chr1	-	2861	19	NNC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	36.9417292235311	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75156915	75148360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154549_75154747_75155574_75155713_75156213
ES.785.7	chr1	-	2675	18	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	36.7841360420475	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75156920	75148360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ES.785.9	chr1	-	3326	17	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	-29	0	intron_retention	FALSE	canonical	3	123	junction_16	16.1486019131688	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGGCTGTGGTTTGGTTG	NA	False	NA	-4	True	AATAAA	-13	NA	75157065	75148362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154747_75155574_75155713_75156213
ES.7850.1	chr12	-	141	1	Intergenic	novelGene_6477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	76125047	76124906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76124900_76125000
ES.7851.1	chr12	-	180	1	Intergenic	novelGene_6478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTAAAACATATAT	NA	False	NA	NA	False	NA	NA	NA	76200378	76200198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76200200_76200400
ES.7852.1	chr12	-	1359	7	ISM	ENSMUSG00000021056.9	ENSMUST00000021453.6	2137	10	25206	7	7927	-7	3prime_fragment	TRUE	canonical	0	0	junction_1	11.1567119807864	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAATCTCTTCTCTCCT	5919	False	NA	NA	False	AATAAA	-17	NA	76268311	76245466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76245726_76250865_76251085_76253561_76253769_76259148_76259332_76261186_76261493_76263736_76263867_76268256
ES.7852.2	chr12	-	819	4	NIC	ENSMUSG00000021056.9	novel	2137	10	NA	NA	12426	-12	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	11.0855260988773	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAAAAAATCTCTTCT	1072	False	NA	NA	False	AATAAA	-12	NA	76263812	76245471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76245726_76259148_76259332_76261186_76261493_76263736
ES.7852.3	chr12	-	167	1	Intergenic	novelGene_6479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8765	False	NA	NA	False	NA	NA	NA	76246326	76246159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76246200_76246300
ES.7852.4	chr12	-	1039	5	ISM	ENSMUSG00000021056.9	ENSMUST00000218426.2	1980	9	29765	1	12483	-1	3prime_fragment	FALSE	canonical	2	7	junction_2	10.0623058987491	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATAGATGGTTTGAACT	1129	False	NA	NA	False	AATAAA	-19	NA	76263755	76250760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76251085_76253561_76253769_76259148_76259332_76261186_76261493_76263736
ES.7852.5	chr12	-	1140	5	NNC	ENSMUSG00000021056.9	novel	1980	9	NA	NA	12582	-2	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	10.4163333279998	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATAGATGGTTTGAAC	1228	False	NA	NA	False	AATAAA	-18	NA	76263656	76250761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76251085_76253561_76253769_76259148_76259332_76261186_76261493_76263535
ES.7852.6	chr12	-	648	3	ISM	ENSMUSG00000021056.9	ENSMUST00000218426.2	1980	9	29707	8307	12425	2193	internal_fragment	FALSE	canonical	2	10	junction_2	11.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTGCTTGTACTAGTT	1071	False	NA	NA	False	NA	NA	NA	76263813	76259066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76259332_76261186_76261493_76263736
ES.7853.1	chr12	+	6920	1	Intergenic	novelGene_6480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCTTGGCTACATTTT	NA	False	NA	NA	False	NA	NA	NA	76269180	76276100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76269200_76276100
ES.7853.2	chr12	+	5365	1	Intergenic	novelGene_6481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCCCGAAAGAAGTTC	NA	False	NA	NA	False	NA	NA	NA	76269214	76274579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76269200_76274600
ES.7853.3	chr12	+	2885	1	Intergenic	novelGene_6483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCATACTATTTAGTGC	NA	False	NA	NA	False	NA	NA	NA	76269294	76272179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76269300_76272200
ES.7853.4	chr12	+	912	1	Intergenic	novelGene_6484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGTTTGACAATGGTAA	NA	False	NA	NA	False	NA	NA	NA	76269309	76270221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76269300_76270200
ES.7853.5	chr12	+	5542	1	Antisense	novelGene_ENSMUSG00000021056.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAATTTGTATTTGACT	NA	False	NA	NA	False	TTTAAA	-4	NA	76274264	76279806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_76274300_76279800
ES.7854.1	chr12	-	2934	1	Intergenic	novelGene_6482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCTGGTCCAGTAGAAA	2049	False	NA	NA	False	NA	NA	NA	76272181	76269247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76269200_76272200
ES.7854.2	chr12	-	2825	1	Intergenic	novelGene_6485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAAAAAATGTAGCCAA	2053	False	NA	NA	False	NA	NA	NA	76272177	76269352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76269400_76272200
ES.7854.3	chr12	-	1921	1	Intergenic	novelGene_6486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAAACACTTTACC	2053	False	NA	NA	False	NA	NA	NA	76272177	76270256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76270300_76272200
ES.7855.1	chr12	-	204	1	Intergenic	novelGene_6487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAACCTCTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	76279648	76279444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76279400_76279600
ES.7856.1	chr12	+	157	1	Intergenic	novelGene_6488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	76283113	76283270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76283100_76283300
ES.7857.1	chr12	+	3451	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-147	15	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	278.204827287245	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGTGCCGTTGATAG	7764	False	NA	24	True	AATAAA	-32	NA	76301924	76366592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326286_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.13	chr12	+	3402	3	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-8	3654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	655	981	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTGTGGTGGGTGTCT	7903	False	NA	NA	False	TTTAAA	-23	NA	76302063	76321422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76318360
ES.7857.14	chr12	+	3203	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_10	277.487453219243	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	7913	False	NA	7	True	AATAAA	-15	NA	76302073	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336492_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.16	chr12	+	3229	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	278.105406786619	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	7916	False	NA	8	True	AATAAA	-16	NA	76302076	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349738_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.17	chr12	+	3050	26	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	5	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	288.524117536126	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGTGTTGAAACAT	7916	False	NA	6	True	AATAAA	-14	NA	76302076	76366574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.18	chr12	+	3197	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	57	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	278.204827287245	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	7968	False	NA	7	True	AATAAA	-15	NA	76302128	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326915_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.2	chr12	+	3389	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	-128	-20	-128	20	multi-exon	FALSE	canonical	3	837	junction_20	135.484134190258	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCCGTTGATAGACCTA	7783	False	NA	29	True	AATAAA	-37	NA	76301943	76366597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.23	chr12	+	3073	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	274.61272393709	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGTGTTGAAACAT	7997	False	NA	6	True	AATAAA	-14	NA	76302157	76366574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350677_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.24	chr12	+	2559	21	ISM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	87	15518	-28	2769	5prime_fragment	FALSE	canonical	3	837	junction_20	111.680291457356	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTCAACCAGTTATTT	7998	False	NA	NA	False	NA	NA	NA	76302158	76351059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615
ES.7857.25	chr12	+	3195	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-23	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	277.263603136334	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGTGCCGTTGATAGA	8003	False	NA	25	True	AATAAA	-33	NA	76302163	76366593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347131_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.26	chr12	+	3139	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	277.945016322951	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8006	False	NA	8	True	AATAAA	-16	NA	76302166	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327285_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.27	chr12	+	3166	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	362.531020384106	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8006	False	NA	7	True	AATAAA	-15	NA	76302166	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347131_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357776_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.28	chr12	+	3134	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	278.257975062479	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8009	False	NA	7	True	AATAAA	-15	NA	76302169	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344262_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.29	chr12	+	3095	27	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	283.059460686308	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8010	False	NA	9	True	AATAAA	-17	NA	76302170	76366577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.3	chr12	+	3264	27	FSM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	-206	-18	-91	17	multi-exon	FALSE	canonical	3	9	junction_1	281.366814005612	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGCCGTTGATAGAC	7820	False	NA	26	True	AATAAA	-34	NA	76301980	76366594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76302319_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.32	chr12	+	3088	27	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	370.818094450092	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8027	False	NA	8	True	AATAAA	-16	NA	76302187	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337910_76340903_76341022_76341145_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.33	chr12	+	3206	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	274.196249045091	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8027	False	NA	8	True	AATAAA	-16	NA	76302187	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361857_76364279_76364475_76366354
ES.7857.34	chr12	+	3237	27	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	1	0	intron_retention	FALSE	canonical	3	837	junction_19	137.955142353503	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8027	False	NA	9	True	AATAAA	-17	NA	76302187	76366577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.35	chr12	+	3109	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	362.977074555611	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8027	False	NA	7	True	AATAAA	-15	NA	76302187	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302311_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348037_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.36	chr12	+	3247	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	278.070946528319	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8027	False	NA	8	True	AATAAA	-16	NA	76302187	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347362_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.37	chr12	+	3114	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	278.27315827669	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGGTGTTGAAACAT	8029	False	NA	6	True	AATAAA	-14	NA	76302189	76366574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326979_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.38	chr12	+	3142	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	8	5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	277.777599999943	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGAAACATAAACTGTG	8034	False	NA	14	True	AATAAA	-22	NA	76302194	76366582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340145_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.39	chr12	+	3052	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	362.75410846726	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8034	False	NA	7	True	AATAAA	-15	NA	76302194	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317220_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336211_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.4	chr12	+	3329	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	278.265842831444	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7820	False	NA	9	True	AATAAA	-17	NA	76301980	76366577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336625_76337749_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.43	chr12	+	3149	27	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	9	0	intron_retention	FALSE	canonical	3	18	junction_20	279.424143679471	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8035	False	NA	8	True	AATAAA	-16	NA	76302195	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350677_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.45	chr12	+	3225	29	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	356.660064747533	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8035	False	NA	9	True	AATAAA	-17	NA	76302195	76366577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76312306_76312415_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.47	chr12	+	3211	27	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	9	-1	intron_retention	FALSE	canonical	3	1156	junction_13	104.851747974244	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8035	False	NA	7	True	AATAAA	-15	NA	76302195	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.48	chr12	+	4057	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	363.12963293499	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8035	False	NA	7	True	AATAAA	-15	NA	76302195	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76334731_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340145_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.49	chr12	+	4537	26	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	10	-1	intron_retention	FALSE	canonical	0	0	junction_4	288.538208215134	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8036	False	NA	7	True	AATAAA	-15	NA	76302196	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.51	chr12	+	2678	22	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	11	6180	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	287.997118277344	1072	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTACGAAGCCCTGCT	8037	False	NA	NA	False	NA	NA	NA	76302197	76354470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336471_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995
ES.7857.52	chr12	+	3040	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	18	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	274.196249045091	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAATTTTGCTACCTT	8044	False	NA	-7	True	AATAAA	-1	NA	76302204	76366561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361867_76364423_76364475_76366354
ES.7857.53	chr12	+	3291	29	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	470.457575512546	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8045	False	NA	7	True	AATAAA	-15	NA	76302205	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76334731_76334957_76335654_76335783_76336204_76336303_76336492_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347234_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.54	chr12	+	2977	26	NNC	ENSMUSG00000021048.8	novel	3040	27	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.366028512375	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8048	False	NA	7	True	AATAAA	-15	NA	76302208	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302339_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.55	chr12	+	7024	25	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	28	0	intron_retention	FALSE	canonical	3	837	junction_18	140.586809629021	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	8054	False	NA	9	True	AATAAA	-17	NA	76302214	76366577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.56	chr12	+	5588	27	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-25	0	intron_retention	FALSE	canonical	3	837	junction_20	132.299395983182	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8068	False	NA	8	True	AATAAA	-16	NA	76302228	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76364475_76366354
ES.7857.57	chr12	+	4350	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	277.57788363175	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	8073	False	NA	7	True	AATAAA	-15	NA	76302233	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76352029_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.6	chr12	+	3318	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-86	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	277.955103893635	1084	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGTGTTGAAACATA	7825	False	NA	7	True	AATAAA	-15	NA	76301985	76366575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336211_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.60	chr12	+	3060	28	NNC	ENSMUSG00000021048.8	novel	738	5	NA	NA	5472	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	277.984535397995	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTTGGTGTTGAAACA	575	False	NA	5	True	AATAAA	-13	NA	76307725	76366573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76307796_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.62	chr12	+	4714	1	NIC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	12301	1500	mono-exon	FALSE	NA	NA	NA	NA	NA	981	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAGGAAGGAAGAAA	7404	False	NA	NA	False	NA	NA	NA	76314554	76319268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76314600_76319300
ES.7857.63	chr12	+	1858	1	Genic_Genomic	ENSMUSG00000021048.8	novel	NA	NA	NA	NA	15392	1735	mono-exon	FALSE	NA	NA	NA	NA	NA	981	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCAGACTTGCCTATA	NA	False	NA	NA	False	NA	NA	NA	76317645	76319503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_76317600_76319500
ES.7857.65	chr12	+	2561	22	ISM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	27472	-2	-10180	1	3prime_fragment	FALSE	canonical	3	837	junction_14	149.554940647606	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGGTGTTGAAACATAAAC	380	False	NA	10	True	AATAAA	-18	NA	76329658	76366578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7857.7	chr12	+	2408	2	FSM	ENSMUSG00000021048.8	ENSMUST00000218110.2	642	2	-262	-1504	-80	1504	multi-exon	FALSE	canonical	3	1310	junction_1	0	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAGAAAGAAA	7831	False	NA	NA	False	NA	NA	NA	76301991	76319272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76302319_76317191
ES.7857.9	chr12	+	4219	28	NNC	ENSMUSG00000021048.8	novel	3241	28	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	277.822134730034	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	7855	False	NA	8	True	AATAAA	-16	NA	76302015	76366576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76334731_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ES.7858.1	chr12	+	3983	1	ISM	ENSMUSG00000021057.16	ENSMUST00000154078.3	6685	2	2822	2456	2808	1641	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCTCTTAGACATAAAA	3353	False	NA	NA	False	AATAAA	-14	NA	76374486	76378469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76374500_76378500
ES.7858.2	chr12	+	6164	1	ISM	ENSMUSG00000021057.16	ENSMUST00000154078.3	6685	2	3094	3	3080	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACTGTGTCTTTAAAAC	3625	False	NA	NA	False	AATAAA	-20	NA	76374758	76380922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76374800_76380900
ES.7859.1	chr12	+	3986	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-276	8480	-276	-8480	multi-exon	FALSE	canonical	3	110	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAGAGTGCACAAAAGT	NA	False	NA	NA	False	AATAAA	-36	NA	76416763	76435244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76417505_76431999
ES.7859.10	chr12	+	3658	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	840	-8495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTGTTCTATAAAAGT	260	False	NA	NA	False	AATAAA	-21	NA	76417879	76435229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76418308_76431999
ES.7859.11	chr12	+	3444	3	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	875	-8501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATCTGGTTGTTCTAT	295	False	NA	NA	False	AATAAA	-15	NA	76417914	76435223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76418019_76424759_76424876_76431999
ES.7859.12	chr12	+	3429	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	7637	-8495	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTGTTCTATAAAAGT	7057	False	NA	NA	False	AATAAA	-21	NA	76424676	76435229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76424876_76431999
ES.7859.13	chr12	+	5591	1	ISM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	15764	5330	15764	-5330	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGAACGTGTACATGTA	NA	False	NA	NA	False	NA	NA	NA	76432803	76438394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76432800_76438400
ES.7859.14	chr12	+	2885	2	Fusion	ENSMUSG00000033454.7_ENSMUSG00000059970.8	novel	12190	2	NA	NA	16399	0	multi-exon	FALSE	canonical	0	0	junction_1	0	177	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	False	NA	NA	False	AGTAAA	-20	NA	76433438	76453712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_76433914_76451302
ES.7859.15	chr12	+	2442	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	78	4	78	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCTGTCTGGCGTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	76451027	76453708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76451064_76451302
ES.7859.16	chr12	+	2589	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	-59	-4	-59	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGGCGTTTTCAA	NA	False	NA	NA	False	AGTAAA	-20	NA	76451123	76453712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76451100_76453700
ES.7859.2	chr12	+	4031	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	-44	8203	-44	-8203	multi-exon	FALSE	canonical	3	110	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAATGTGAATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	76416995	76435521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76417505_76431999
ES.7859.3	chr12	+	2800	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	64	9326	64	-9326	multi-exon	FALSE	canonical	3	110	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGTAAGTGGCTATTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	76417103	76434398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76417505_76431999
ES.7859.4	chr12	+	3500	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	159	-8521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAGAAATCAAT	NA	False	NA	NA	False	GATAAA	-4	NA	76417198	76435203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76417505_76432009
ES.7859.5	chr12	+	3292	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	216	8682	216	-8682	multi-exon	FALSE	canonical	3	110	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGATTTCTAAAGTGT	NA	False	NA	NA	False	ATTAAA	-41	NA	76417255	76435042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76417505_76431999
ES.7859.6	chr12	+	3479	3	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	229	2265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	55	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATTACTAATAATCCTG	NA	False	NA	NA	False	AATAAA	-3	NA	76417268	76445989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76417505_76431999_76435210_76445956
ES.7859.7	chr12	+	3740	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	761	-8203	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAATGTGAATTAC	181	False	NA	NA	False	AATAAA	-19	NA	76417800	76435521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76418019_76431999
ES.7859.8	chr12	+	2474	4	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	816	-1674	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.37704215656966	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTTTGTCATGTATCT	236	False	NA	NA	False	ATTAAA	-13	NA	76417855	76442050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76418019_76431999_76433914_76435350_76435415_76441717
ES.7859.9	chr12	+	3392	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	817	-8495	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTGTTCTATAAAAGT	237	False	NA	NA	False	AATAAA	-21	NA	76417856	76435229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76418019_76431999
ES.786.1	chr1	-	3677	15	NIC	ENSMUSG00000033124.17	novel	4110	16	NA	NA	102	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	16.1487031134051	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGCATCTTTTTTTTT	NA	False	NA	3	True	AATAAA	-18	NA	75168256	75157504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
ES.786.12	chr1	-	3725	13	NIC	ENSMUSG00000033124.17	novel	3764	16	NA	NA	-53	0	intron_retention	FALSE	canonical	3	39	junction_9	6.42693982821961	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTGTGGCATCTTTT	NA	False	NA	-2	True	AATAAA	-13	NA	75167079	75157509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946
ES.786.14	chr1	-	4812	14	NIC	ENSMUSG00000033124.17	novel	3764	16	NA	NA	-14	0	intron_retention	FALSE	canonical	3	39	junction_9	6.27005657609687	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTGTGGCATCTTTT	NA	False	NA	-2	True	AATAAA	-13	NA	75168584	75157509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466
ES.786.17	chr1	-	3301	15	ISM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	188	1212	-46	913	5prime_fragment	FALSE	canonical	3	15	junction_14	11.076035907696	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTTCTTCTTTTTACT	NA	False	NA	NA	False	AATACA	-19	NA	75168652	75158720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
ES.786.2	chr1	-	3857	16	FSM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	188	-4	-46	-1	multi-exon	FALSE	canonical	3	15	junction_15	10.8226100774669	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGCATCTTTTTTTTT	NA	False	NA	3	True	AATAAA	-18	NA	75168652	75157504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
ES.786.3	chr1	-	4551	15	NIC	ENSMUSG00000033124.17	novel	4013	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	19	junction_14	10.3144440035341	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGCATCTTTTTTTTT	NA	False	NA	3	True	AATAAA	-18	NA	75168603	75157504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
ES.786.4	chr1	-	3905	16	FSM	ENSMUSG00000033124.17	ENSMUST00000189702.7	4110	16	202	3	1	2	multi-exon	FALSE	canonical	3	11	junction_15	11.6714276000077	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGGCATCTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	75168368	75157506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
ES.786.6	chr1	-	3666	15	NIC	ENSMUSG00000033124.17	novel	4110	16	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.1233519987609	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGGCATCTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	75168349	75157506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168130
ES.786.7	chr1	-	4665	14	NIC	ENSMUSG00000033124.17	novel	4013	16	NA	NA	2	2	intron_retention	FALSE	canonical	3	19	junction_13	10.5353729331351	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTGGCATCTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	75168604	75157506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
ES.786.8	chr1	-	3749	16	NNC	ENSMUSG00000033124.17	novel	4041	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.3138077841708	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168605	75157508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166271_75166753_75166800_75166946_75167079_75167466_75167525_75168525
ES.786.9	chr1	-	4000	16	NNC	ENSMUSG00000033124.17	novel	4110	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	20.3036942451368	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	False	NA	-1	True	AATAAA	-14	NA	75168364	75157508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162831_75163583_75164229_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168130
ES.7860.1	chr12	-	175	1	Intergenic	novelGene_6489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACTCATTTAGG	NA	False	NA	NA	False	NA	NA	NA	76307095	76306920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76306900_76307100
ES.7861.1	chr12	-	3820	5	NNC	ENSMUSG00000056459.15	novel	2707	3	NA	NA	48	38472	intron_retention	FALSE	canonical	0	0	junction_1	33.7749907475931	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGTAATTATTTTG	NA	False	NA	NA	False	AATAAA	-9	NA	76416328	76356083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76359284_76359462_76359608_76362038_76362219_76402662_76402843_76416213
ES.7861.10	chr12	-	3641	3	NNC	ENSMUSG00000056459.15	novel	2707	3	NA	NA	-1	574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416168	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76397048_76402662_76402843_76415773
ES.7861.11	chr12	-	3684	3	NNC	ENSMUSG00000056459.15	novel	2707	3	NA	NA	-33	574	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416200	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76397048_76402662_76402854_76415773
ES.7861.12	chr12	-	1791	3	NIC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	-138	10	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	31	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTTAAGAGTGAGTG	NA	False	NA	-2	True	ATTAAA	-29	NA	76416514	76395663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76396974_76402662_76402843_76416213
ES.7861.13	chr12	-	1801	4	NNC	ENSMUSG00000056459.15	novel	1591	3	NA	NA	-1831	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.79869268479038	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTTAAGAGTGAGTG	NA	False	NA	-2	True	ATTAAA	-29	NA	76418207	76395663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76396974_76402662_76402843_76403833_76404060_76418122
ES.7861.14	chr12	-	1874	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-148	-54	-148	9	multi-exon	FALSE	canonical	3	78	junction_2	3	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAACTTTAAGAGTGAGT	NA	False	NA	-3	True	ATTAAA	-28	NA	76416524	76395664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76397048_76402662_76402843_76416213
ES.7861.15	chr12	-	1987	3	NNC	ENSMUSG00000056459.15	novel	1681	3	NA	NA	-34	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAGAAACTTTAAGAGT	NA	False	NA	-7	True	ATTAAA	-24	NA	76416201	76395668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76397048_76402662_76402843_76415773
ES.7861.16	chr12	-	2932	2	ISM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	-304	1116	-304	2	intron_retention	FALSE	canonical	3	84	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTAGAAACTTTAAG	NA	False	NA	-10	True	ATTAAA	-21	NA	76404218	76395671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76397048_76402662
ES.7861.17	chr12	-	2187	4	NNC	ENSMUSG00000056459.15	novel	1681	3	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.6896483427918	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGAAGTTAATGTAG	NA	False	NA	-20	True	ATTAAA	-11	NA	76416188	76395681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76397048_76402662_76402843_76403833_76404060_76415773
ES.7861.18	chr12	-	1642	3	FSM	ENSMUSG00000056459.15	ENSMUST00000167011.8	1681	3	-6	45	-6	0	multi-exon	FALSE	canonical	0	0	junction_2	42	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATGAGCTTTTCTATA	NA	False	NA	-2	True	ATTAAA	-16	NA	76416244	76395718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76397048_76402662_76402843_76416111
ES.7861.19	chr12	-	1770	4	NNC	ENSMUSG00000056459.15	novel	1681	3	NA	NA	17	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.5979797464467	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTATGAGCTTTTCTAT	NA	False	NA	-3	True	ATTAAA	-15	NA	76416221	76395719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76397048_76402662_76402843_76413958_76414111_76416111
ES.7861.2	chr12	-	4200	5	Fusion	ENSMUSG00000112096.2_ENSMUSG00000056459.15	novel	1672	3	NA	NA	51	-66	multi-exon	TRUE	non_canonical	0	0	junction_2	39.5821929660296	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTGTAACCGCTCTC	NA	False	NA	-3	True	NA	NA	NA	76416325	76391364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_76391798_76392008_76392564_76394127_76397048_76402662_76402843_76416213
ES.7861.20	chr12	-	1207	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	28	437	28	-437	multi-exon	FALSE	canonical	3	78	junction_2	3	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCTGTGGTCATAAATT	NA	False	NA	NA	False	ATTAAA	-41	NA	76416348	76396155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76397048_76402662_76402843_76416213
ES.7861.21	chr12	-	1681	1	Genic_Genomic	ENSMUSG00000056459.15	novel	NA	NA	NA	NA	-1144	-6461	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76405058	76403377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_76403400_76405100
ES.7861.22	chr12	-	177	1	Intergenic	novelGene_6490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	76406563	76406386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76406400_76406600
ES.7861.3	chr12	-	4204	5	Fusion	ENSMUSG00000112096.2_ENSMUSG00000056459.15	novel	1672	3	NA	NA	19	-68	multi-exon	TRUE	non_canonical	0	0	junction_2	39.5821929660296	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTGTAACCGCTC	NA	False	NA	-5	True	NA	NA	NA	76416357	76391366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_76391798_76392008_76392557_76394146_76397048_76402662_76402843_76416213
ES.7861.4	chr12	-	5762	4	Fusion	ENSMUSG00000112096.2_ENSMUSG00000056459.15	novel	1672	3	NA	NA	49	-70	multi-exon	FALSE	non_canonical	1	4	junction_1	36.3807030657127	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGCTTGTGTAACCGC	NA	False	NA	-7	True	NA	NA	NA	76416327	76391368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_76391798_76392008_76397048_76402662_76402843_76416213
ES.7861.5	chr12	-	4051	4	Fusion	ENSMUSG00000112096.2_ENSMUSG00000056459.15	novel	1672	3	NA	NA	-14	-125	multi-exon	FALSE	non_canonical	0	0	junction_1	38.262252939418	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAAGAAGTTGTTATGT	NA	False	NA	-62	True	ACTAAA	-16	NA	76416252	76391423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_76392562_76394353_76397048_76402662_76402843_76416213
ES.7861.6	chr12	-	3828	3	NIC	ENSMUSG00000056459.15	novel	2707	3	NA	NA	-33	574	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	41.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416200	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76397048_76402662_76402843_76415618
ES.7861.7	chr12	-	2448	5	NNC	ENSMUSG00000056459.15	novel	1681	3	NA	NA	6	574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.2310295189082	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416161	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76395615_76396091_76396175_76396545_76397048_76402662_76402843_76416111
ES.7861.8	chr12	-	3447	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	-38	-1737	-38	574	multi-exon	FALSE	canonical	3	78	junction_2	3	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416414	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76397048_76402662_76402843_76416213
ES.7861.9	chr12	-	3441	3	NIC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	-106	574	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	31	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTGTTTTTATTCCCCC	NA	False	NA	NA	False	NA	NA	NA	76416482	76393981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76396974_76402662_76402843_76416213
ES.7862.1	chr12	-	4897	1	Intergenic	novelGene_6491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTAACATTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	76425072	76420175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76420200_76425100
ES.7863.1	chr12	-	175	1	Antisense	novelGene_ENSMUSG00000033454.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76436345	76436170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_76436200_76436300
ES.7864.1	chr12	-	5553	1	FSM	ENSMUSG00000097323.3	ENSMUST00000217797.2	1232	1	255	-4576	-73	4576	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGACGTGCCTCCACCC	NA	False	NA	NA	False	AATAAA	-18	NA	76450501	76444948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76444900_76450500
ES.7865.1	chr12	+	181	1	Intergenic	novelGene_6492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTTGCACA	NA	False	NA	NA	False	NA	NA	NA	76456808	76456989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76456800_76457000
ES.7866.1	chr12	+	1531	11	FSM	ENSMUSG00000052221.9	ENSMUST00000063977.9	1515	11	-24	8	-24	4	multi-exon	FALSE	canonical	1	1	junction_4	1.57797338380595	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCACATTTTCCTACT	NA	False	NA	NA	False	AATAAA	-19	NA	76464287	76486258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76464491_76465701_76465767_76473522_76473610_76474658_76474757_76474853_76474921_76475608_76475708_76482916_76483052_76484369_76484413_76484729_76484909_76485138_76485328_76485892
ES.7867.1	chr12	+	2712	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	-2	-1855	-2	0	multi-exon	FALSE	canonical	3	44	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTCAGTCGTGGT	NA	False	NA	10	True	NA	NA	NA	76491268	76497289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76491440_76494748
ES.7867.2	chr12	+	3609	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	0	-2754	0	78	multi-exon	FALSE	canonical	3	44	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTATAATAGTGCTC	NA	False	NA	NA	False	TTTAAA	-21	NA	76491270	76498188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76491440_76494748
ES.7867.3	chr12	+	6858	1	FSM	ENSMUSG00000073000.4	ENSMUST00000220043.2	818	1	-5136	-904	2	83	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAATAGTGCTCTATCT	NA	False	NA	NA	False	TTTAAA	-26	NA	76491335	76498193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76491300_76498200
ES.7867.4	chr12	+	3172	2	NIC	ENSMUSG00000073000.4	novel	1598	4	NA	NA	6	1881	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTTGCTGAGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	76491339	76499991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76491440_76496919
ES.7867.5	chr12	+	2198	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	76	-1419	13	-436	multi-exon	FALSE	canonical	3	44	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCATTGAGCCCCCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	76491346	76496853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76491440_76494748
ES.7867.6	chr12	+	2688	1	FSM	ENSMUSG00000073000.4	ENSMUST00000220043.2	818	1	367	-2237	367	1416	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTAGAGTAAGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	76496838	76499526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76496800_76499500
ES.7868.1	chr12	+	178	1	Intergenic	novelGene_6493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATACCTTCATG	996	False	NA	NA	False	NA	NA	NA	76534634	76534812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76534600_76534800
ES.7868.2	chr12	+	162	2	Intergenic	novelGene_6494	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	759	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTATAAAAA	997	False	NA	NA	False	NA	NA	NA	76534635	76539029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76534687_76538918
ES.7868.3	chr12	+	225	1	Intergenic	novelGene_6495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	5228	False	NA	NA	False	NA	NA	NA	76538866	76539091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76538900_76539100
ES.7869.1	chr12	+	174	1	Intergenic	novelGene_6496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAGAAGGAGAA	4835	False	NA	NA	False	NA	NA	NA	76551917	76552091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76551900_76552100
ES.787.1	chr1	+	4333	12	NNC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_5	40.1266589729394	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTGTGTACTTAC	18	False	NA	15	True	AATAAA	-11	NA	75168777	75176027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172724_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.10	chr1	+	6098	6	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	-16	-6	intron_retention	FALSE	canonical	3	111	junction_3	12.1556571192182	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTGTGTACTT	60	False	NA	13	True	AATAAA	-9	NA	75168819	75176025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.11	chr1	+	3452	10	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-16	-7	intron_retention	FALSE	canonical	0	0	junction_5	39.1675728815572	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	60	False	NA	12	True	AATAAA	-8	NA	75168819	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75173415_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.13	chr1	+	2683	3	FSM	ENSMUSG00000026199.18	ENSMUST00000151887.9	2259	3	28	-452	-13	2	multi-exon	FALSE	canonical	3	112	junction_1	5.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGGTTTCTTGTTTT	63	False	NA	NA	False	NA	NA	NA	75168822	75172180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75170929_75171484_75171588_75171706
ES.787.14	chr1	+	3480	9	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-13	-7	intron_retention	FALSE	canonical	3	90	junction_4	16.3854928213954	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	63	False	NA	12	True	AATAAA	-8	NA	75168822	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.15	chr1	+	2808	12	NIC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	-13	0	intron_retention	FALSE	canonical	2	42	junction_4	25.159327008829	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	63	False	NA	19	True	AATAAA	-15	NA	75168822	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.16	chr1	+	2945	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-11	-9	intron_retention	FALSE	canonical	2	6	junction_1	36.5644636224846	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAAAACTGTGTGTGTA	65	False	NA	10	True	AATAAA	-6	NA	75168824	75176022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.17	chr1	+	4849	9	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	90	junction_4	15.5999799679359	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTGTGTACTTACAGT	68	False	NA	18	True	AATAAA	-14	NA	75168827	75176030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.18	chr1	+	3240	9	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-5	0	intron_retention	FALSE	canonical	2	6	junction_1	39.7694527872839	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	71	False	NA	19	True	AATAAA	-15	NA	75168830	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.19	chr1	+	4212	12	NIC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	-5	0	intron_retention	FALSE	canonical	2	42	junction_3	26.5653723532056	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	71	False	NA	19	True	AATAAA	-15	NA	75168830	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.2	chr1	+	4288	12	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-16	-7	intron_retention	FALSE	canonical	0	0	junction_3	36.5142336109954	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	19	False	NA	12	True	AATAAA	-8	NA	75168778	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75171901_75172212_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.20	chr1	+	2829	12	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_4	35.6993876837087	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	73	False	NA	19	True	AATAAA	-15	NA	75168832	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172212_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.21	chr1	+	4553	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	76	junction_3	18.396738841436	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	73	False	NA	19	True	AATAAA	-15	NA	75168832	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.22	chr1	+	2983	11	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-2	-7	intron_retention	FALSE	non_canonical	0	0	junction_4	37.3905068165704	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	74	False	NA	12	True	AATAAA	-8	NA	75168833	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171881_75172234_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.23	chr1	+	5387	10	NIC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	-2	0	intron_retention	FALSE	canonical	2	42	junction_3	28.8790581563873	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	74	False	NA	19	True	AATAAA	-15	NA	75168833	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75173026_75173157_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.24	chr1	+	4631	10	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	0	-7	intron_retention	FALSE	canonical	3	90	junction_5	14.8772757362809	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	76	False	NA	12	True	AATAAA	-8	NA	75168835	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.25	chr1	+	2584	12	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.3496972572289	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTGTGTACTT	76	False	NA	13	True	AATAAA	-9	NA	75168835	75176025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172212_75172357_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.26	chr1	+	2735	13	FSM	ENSMUSG00000026199.18	ENSMUST00000145459.9	2770	13	35	0	3	0	multi-exon	FALSE	canonical	0	0	junction_4	34.990077958695	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	79	False	NA	19	True	AATAAA	-15	NA	75168838	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172212_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.27	chr1	+	3173	9	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	7	0	intron_retention	FALSE	canonical	1	1	junction_1	41.296942986134	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	83	False	NA	19	True	AATAAA	-15	NA	75168842	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169267_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.28	chr1	+	3041	12	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	76	junction_4	18.0906806746658	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	85	False	NA	19	True	AATAAA	-15	NA	75168844	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.29	chr1	+	3558	8	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	9	-7	intron_retention	FALSE	canonical	3	90	junction_4	17.4274004290452	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	85	False	NA	12	True	AATAAA	-8	NA	75168844	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173314_75174287_75174769_75174908_75175289_75175423_75175510_75175707
ES.787.3	chr1	+	7142	2	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	-5	0	intron_retention	FALSE	canonical	3	111	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	30	False	NA	19	True	AATAAA	-15	NA	75168789	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75175021_75175120
ES.787.30	chr1	+	4364	11	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	9	-7	intron_retention	FALSE	canonical	1	5	junction_4	36.9025744359387	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	85	False	NA	12	True	AATAAA	-8	NA	75168844	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172966_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.31	chr1	+	5073	7	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	9	0	intron_retention	FALSE	canonical	3	90	junction_4	17.8699002049069	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	85	False	NA	19	True	AATAAA	-15	NA	75168844	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75175289_75175423_75175510_75175707
ES.787.32	chr1	+	3122	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	9	-7	intron_retention	FALSE	canonical	3	90	junction_6	15.25909564817	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	85	False	NA	12	True	AATAAA	-8	NA	75168844	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.33	chr1	+	2990	11	NIC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	9	0	intron_retention	FALSE	canonical	2	42	junction_4	26.3782107050497	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	85	False	NA	19	True	AATAAA	-15	NA	75168844	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.34	chr1	+	2949	11	NNC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	9	14	intron_retention	FALSE	canonical	1	1	junction_1	41.3685871163133	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCAGAGGGATTGTAGC	85	False	NA	33	True	AATAAA	-29	NA	75168844	75176045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169267_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.35	chr1	+	3245	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	9	0	intron_retention	FALSE	canonical	3	76	junction_4	18.970766985022	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	85	False	NA	19	True	AATAAA	-15	NA	75168844	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.36	chr1	+	3315	9	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	15	0	intron_retention	FALSE	canonical	0	0	junction_4	52.5093741630959	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	91	False	NA	19	True	AATAAA	-15	NA	75168850	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169322_75171484_75171588_75171706_75173026_75173157_75173415_75174293_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.37	chr1	+	2659	13	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.6121402261263	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	93	False	NA	12	True	AATAAA	-8	NA	75168852	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169267_75170821_75170929_75171484_75171588_75171706_75171901_75172212_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.38	chr1	+	5918	7	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	17	0	intron_retention	FALSE	canonical	1	5	junction_2	45.2499232657422	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	93	False	NA	19	True	AATAAA	-15	NA	75168852	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75170929_75171484_75171588_75171687_75173026_75173157_75174769_75174908_75175289_75175423_75175510_75175707
ES.787.39	chr1	+	1147	4	ISM	ENSMUSG00000026199.18	ENSMUST00000127625.3	1167	5	23	-2	23	2	intron_retention	FALSE	canonical	3	96	junction_1	11.0855260988773	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGGTTTCTTGTTTT	99	False	NA	NA	False	NA	NA	NA	75168858	75172180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706
ES.787.4	chr1	+	2770	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	-12	-19	-3	19	multi-exon	TRUE	canonical	2	42	junction_4	25.5582124222768	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGATTGTAGCCTTCT	32	False	NA	38	True	AATAAA	-34	NA	75168791	75176050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.41	chr1	+	3118	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	23	-9	intron_retention	FALSE	canonical	3	76	junction_4	18.970766985022	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAAAACTGTGTGTGTA	99	False	NA	10	True	AATAAA	-6	NA	75168858	75176022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175289_75175423_75175510_75175707
ES.787.42	chr1	+	3392	9	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	27	0	intron_retention	FALSE	canonical	1	1	junction_1	41.4216127160689	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	103	False	NA	19	True	AATAAA	-15	NA	75168862	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169267_75170821_75170929_75171484_75171588_75171706_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.44	chr1	+	1665	7	NNC	ENSMUSG00000026199.18	novel	3201	11	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.8370472384978	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	113	False	NA	12	True	AATAAA	-8	NA	75168872	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169267_75170821_75170929_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.46	chr1	+	2821	12	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	52	-7	intron_retention	FALSE	canonical	1	5	junction_5	35.2145724906959	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	128	False	NA	12	True	AATAAA	-8	NA	75168887	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172966_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.47	chr1	+	4248	8	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	208	0	intron_retention	FALSE	canonical	3	96	junction_1	15.4179857865509	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	284	False	NA	19	True	AATAAA	-15	NA	75169043	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.48	chr1	+	4340	7	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	242	-6	intron_retention	FALSE	canonical	3	96	junction_1	15.283433296656	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACTGTGTGTGTACTT	318	False	NA	13	True	AATAAA	-9	NA	75169077	75176025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.49	chr1	+	5574	8	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	242	0	intron_retention	FALSE	canonical	3	102	junction_3	12.9109983173657	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	318	False	NA	19	True	AATAAA	-15	NA	75169077	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75173026_75173157_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.5	chr1	+	2843	10	NIC	ENSMUSG00000026199.18	novel	2739	13	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_3	38.749273191113	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	38	False	NA	19	True	AATAAA	-15	NA	75168797	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75172243_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.50	chr1	+	4202	8	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	246	0	intron_retention	FALSE	canonical	3	96	junction_1	14.2026154532989	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	322	False	NA	19	True	AATAAA	-15	NA	75169081	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.51	chr1	+	3868	8	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	1099	-7	intron_retention	FALSE	canonical	3	90	junction_3	15.6700676580595	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	1175	False	NA	12	True	AATAAA	-8	NA	75169934	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.52	chr1	+	4316	9	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	1236	0	intron_retention	FALSE	canonical	0	0	junction_4	41.4380184733778	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	1312	False	NA	19	True	AATAAA	-15	NA	75170071	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75170929_75171484_75171588_75171706_75173026_75173157_75174024_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.53	chr1	+	4297	8	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	1538	0	intron_retention	FALSE	canonical	1	5	junction_2	42.0204032074216	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	1614	False	NA	19	True	AATAAA	-15	NA	75170373	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75170929_75171484_75171588_75171687_75173026_75173157_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.6	chr1	+	3377	10	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	90	junction_5	16.0100277218474	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	41	False	NA	19	True	AATAAA	-15	NA	75168800	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.7	chr1	+	2596	13	NNC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	-3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	43.6917866677734	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	41	False	NA	12	True	AATAAA	-8	NA	75168800	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172212_75172357_75172444_75172593_75172966_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.787.8	chr1	+	6441	4	NIC	ENSMUSG00000026199.18	novel	3426	10	NA	NA	12	0	intron_retention	FALSE	canonical	3	111	junction_3	5.43650214343336	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	56	False	NA	19	True	AATAAA	-15	NA	75168815	75176031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75170929_75171484_75171588_75171706_75175021_75175120
ES.787.9	chr1	+	4036	11	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	13	-7	intron_retention	FALSE	canonical	3	76	junction_4	17.7763888346312	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	57	False	NA	12	True	AATAAA	-8	NA	75168816	75176024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ES.7870.1	chr12	+	197	1	Intergenic	novelGene_6497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGAGTTGCCTTGGTTA	NA	False	NA	NA	False	NA	NA	NA	76560610	76560807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76560600_76560800
ES.7871.1	chr12	+	5127	17	NNC	ENSMUSG00000052609.10	novel	3152	10	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.2875201288158	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	4503	False	NA	22	True	NA	NA	NA	76577612	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76578048_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.10	chr12	+	6591	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATTGATTTATTAGAA	7040	False	NA	15	True	AATAAA	-17	NA	76580149	76627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.12	chr12	+	5402	9	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-18	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.6069812283645	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAGAGACAAACAC	7206	False	NA	-8	True	NA	NA	NA	76580315	76627242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607168_76612557_76612592_76612941_76613041_76618377_76618417_76619159_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.14	chr12	+	6409	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATTGATTTATTAGAA	7215	False	NA	15	True	AATAAA	-17	NA	76580324	76627265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.15	chr12	+	4517	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	19.8227439188067	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCAGGGAGGGCGAGC	7218	False	NA	NA	False	NA	NA	NA	76580327	76625456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619433_76620020_76620135_76622630_76624051_76624448
ES.7871.16	chr12	+	5278	17	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	37	junction_13	11.9659347211156	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAACCTGTGTGTGGCCT	7220	False	NA	16	True	NA	NA	NA	76580329	76625810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.17	chr12	+	4761	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	166	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGGTGTGTGTGTGG	7220	False	NA	NA	False	NA	NA	NA	76580329	76625622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.18	chr12	+	4920	17	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	18.4251017636267	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTGTGTGTGGCCTCCT	7220	False	NA	19	True	NA	NA	NA	76580329	76625813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.19	chr12	+	4868	17	NNC	ENSMUSG00000052609.10	novel	5138	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.5212669726782	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7220	False	NA	22	True	NA	NA	NA	76580329	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619433_76620020_76620135_76622630_76624051_76624448
ES.7871.2	chr12	+	4866	18	NNC	ENSMUSG00000052609.10	novel	3152	10	NA	NA	-1071	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.4516524235583	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	5973	False	NA	22	True	NA	NA	NA	76579082	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76579250_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.20	chr12	+	4581	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACTGTTTTATCCTGCC	7220	False	NA	NA	False	NA	NA	NA	76580329	76625442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.21	chr12	+	4585	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	-17	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAACTGTTTTATCCT	7220	False	NA	NA	False	NA	NA	NA	76580329	76625439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.22	chr12	+	5236	18	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_17	19.7914734707987	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTGTGTGTGGCCTCCT	7220	False	NA	19	True	NA	NA	NA	76580329	76625813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76623799_76623919
ES.7871.23	chr12	+	4174	4	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28.5228952870419	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGGTATCTTCCCTC	7224	False	NA	-61	True	AGTAAA	-19	NA	76580333	76627189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607061_76623034_76624051_76624448
ES.7871.24	chr12	+	4908	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGTGGCCTCCTT	7226	False	NA	20	True	NA	NA	NA	76580335	76625814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619207_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.25	chr12	+	5265	13	NNC	ENSMUSG00000052609.10	novel	3434	12	NA	NA	11	2039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.6092953677596	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGACTATCTCCTGCCCAG	7235	False	NA	NA	False	NA	NA	NA	76580344	76616897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76615691_76615914
ES.7871.27	chr12	+	6763	17	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	19	-20	intron_retention	FALSE	canonical	3	24	junction_13	13.9012982757007	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAGAGACAAACAC	7243	False	NA	-8	True	NA	NA	NA	76580352	76627242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630
ES.7871.28	chr12	+	4922	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	23	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	23.6207006669997	185	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACCTGTGTGTGGCCTCC	7247	False	NA	18	True	NA	NA	NA	76580356	76625812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610532_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618442_76619175_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.3	chr12	+	4834	17	NNC	ENSMUSG00000052609.10	novel	3152	10	NA	NA	-1046	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	23.2875201288158	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	5998	False	NA	22	True	NA	NA	NA	76579107	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76579250_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.30	chr12	+	6242	19	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	162	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.4328565359006	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTATTGATTTATTAG	7446	False	NA	13	True	AATAAA	-15	NA	76580555	76627263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76583001_76583061_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.31	chr12	+	175	1	Intergenic	novelGene_6499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGGATATG	NA	False	NA	NA	False	NA	NA	NA	76589678	76589853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76589700_76589900
ES.7871.32	chr12	+	4692	16	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-2112	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.6256692646346	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCTGTGTGTGGCCTCCT	NA	False	NA	19	True	NA	NA	NA	76606899	76625813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.33	chr12	+	4582	15	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-2109	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.7217405290358	184	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	22	True	NA	NA	NA	76606902	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76607297_76610540_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624452
ES.7871.34	chr12	+	3814	11	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	2557	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	14.4982757595515	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	NA	False	NA	22	True	NA	NA	NA	76611568	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.35	chr12	+	5129	10	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	2670	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.9803503718466	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAGAGACAAACAC	NA	False	NA	-8	True	NA	NA	NA	76611681	76627242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618442_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.36	chr12	+	6435	3	NIC	ENSMUSG00000052609.10	novel	4815	6	NA	NA	-388	2	intron_retention	FALSE	canonical	3	69	junction_2	2.5	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTATTGATTTATTAGA	NA	False	NA	14	True	AATAAA	-16	NA	76617935	76627264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76620135_76622630_76624051_76624448
ES.7871.37	chr12	+	3307	5	NNC	ENSMUSG00000052609.10	novel	4815	6	NA	NA	53	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.5399328748444	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGTGGCCTCCTT	NA	False	NA	20	True	NA	NA	NA	76618376	76625814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.38	chr12	+	3045	3	ISM	ENSMUSG00000052609.10	ENSMUST00000218427.2	4815	6	1073	1824	1073	-18	intron_retention	FALSE	canonical	3	68	junction_1	3	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCAACTGTTTTATCC	NA	False	NA	NA	False	NA	NA	NA	76619396	76625438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76619520_76620020_76620135_76622630
ES.7871.4	chr12	+	5227	16	NNC	ENSMUSG00000052609.10	novel	3152	10	NA	NA	-1043	1	intron_retention	FALSE	non_canonical	0	0	junction_13	23.8737419680191	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGTGTGGCCTCCTT	6001	False	NA	20	True	NA	NA	NA	76579110	76625814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76579250_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630
ES.7871.5	chr12	+	5236	17	NNC	ENSMUSG00000052609.10	novel	3152	10	NA	NA	-1043	0	intron_retention	FALSE	canonical	1	1	junction_1	19.8993561453631	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	6001	False	NA	22	True	NA	NA	NA	76579110	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76579250_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630
ES.7871.6	chr12	+	5773	16	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-244	0	intron_retention	FALSE	non_canonical	0	0	junction_13	19.0269983619768	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	6800	False	NA	22	True	NA	NA	NA	76579909	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630
ES.7871.7	chr12	+	5207	18	NIC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	13.5993079408692	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	6975	False	NA	22	True	NA	NA	NA	76580084	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618820_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7871.9	chr12	+	5156	17	NNC	ENSMUSG00000052609.10	novel	4535	18	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	18.545552027373	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGGCCTCCTTCC	7019	False	NA	22	True	NA	NA	NA	76580128	76625816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618433_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ES.7872.1	chr12	-	166	1	Intergenic	novelGene_6498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAGTAAAAGCT	9734	False	NA	NA	False	NA	NA	NA	76586977	76586811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76586800_76587000
ES.7873.1	chr12	-	3764	2	Antisense	novelGene_ENSMUSG00000052609.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGGAAAGACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76614726	76610868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_76611180_76611273
ES.7874.1	chr12	-	178	1	Intergenic	novelGene_6500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATTTCACTTT	NA	False	NA	NA	False	NA	NA	NA	76621471	76621293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76621300_76621500
ES.7875.1	chr12	+	2491	2	Antisense	novelGene_ENSMUSG00000021061.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76630011	76632570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_76631208_76631275
ES.7876.1	chr12	+	173	1	Intergenic	novelGene_6502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	8785	False	NA	NA	False	NA	NA	NA	76685083	76685256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76685100_76685300
ES.7877.1	chr12	-	8203	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	405	15642	-119	0	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTCTCTGGGGGAGGAA	NA	False	NA	NA	False	AATAAA	-17	NA	76756916	76642903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
ES.7877.2	chr12	-	8703	31	NIC	ENSMUSG00000021061.16	novel	10394	36	NA	NA	-17	-8	intron_retention	FALSE	canonical	2	6	junction_25	5.33968371930606	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGAGTGTTTCTCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	76756814	76642911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
ES.7877.3	chr12	-	6927	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	395	16928	-129	-1286	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGGGGAAACACTTTAC	NA	False	NA	NA	False	AATAAA	-29	NA	76756926	76644189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
ES.7877.4	chr12	-	185	1	Intergenic	novelGene_6501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGCAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	76672251	76672066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76672100_76672300
ES.7878.1	chr12	-	234	1	Intergenic	novelGene_6503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGTTCACCAATACT	NA	False	NA	NA	False	NA	NA	NA	76765261	76765027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76765000_76765300
ES.7879.1	chr12	+	218	1	Intergenic	novelGene_6504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTAGTCCTGTCTCCATGC	4893	False	NA	NA	False	NA	NA	NA	76770743	76770961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76770700_76771000
ES.788.1	chr1	-	4345	14	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	8	1265	intron_retention	FALSE	canonical	0	0	junction_4	5.3857141736044	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGGTGTAGAGGCTCG	6526	False	NA	NA	False	NA	NA	NA	75186130	75173614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.788.10	chr1	-	5192	15	NNC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	-8	695	intron_retention	FALSE	canonical	0	0	junction_6	5.28957388044961	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGACATGAAGTGTTTT	5226	False	NA	NA	False	TATAAA	-15	NA	75187430	75174184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178189_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.788.11	chr1	-	6321	9	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	6	694	intron_retention	FALSE	canonical	3	10	junction_2	3.56852560590505	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGACATGAAGTGTTT	5265	False	NA	NA	False	TATAAA	-14	NA	75187391	75174185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.12	chr1	-	5125	9	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	35	694	intron_retention	FALSE	canonical	3	12	junction_2	3.21859829739593	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGACATGAAGTGTTT	6553	False	NA	NA	False	TATAAA	-14	NA	75186103	75174185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75177106_75177587_75177932_75178042_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.13	chr1	-	4118	14	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	23	693	intron_retention	FALSE	canonical	3	6	junction_6	4.19071952980807	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTGACATGAAGTGTT	6541	False	NA	NA	False	TATAAA	-13	NA	75186115	75174186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.788.14	chr1	-	6863	6	Fusion	ENSMUSG00000026200.14_ENSMUSG00002076477.1	novel	2031	14	NA	NA	-13	693	intron_retention	FALSE	canonical	3	12	junction_1	3.54400902933387	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCTGACATGAAGTGTT	5186	False	NA	NA	False	TATAAA	-13	NA	75187470	75174186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_75177106_75177587_75179394_75179490_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.15	chr1	-	5236	12	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	12	1	intron_retention	FALSE	canonical	2	7	junction_6	3.92702019390094	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTCCTGTTTTTCCTG	5271	False	NA	NA	False	GATAAA	-20	NA	75187385	75174878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177932_75178042_75178506_75178693_75178735_75178830_75178953_75179051_75179394_75179490_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.16	chr1	-	3157	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	1284	-1015	0	-89	3prime_fragment	FALSE	canonical	2	6	junction_6	4.27083130081252	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGGAATTCATTACGCG	6518	False	NA	NA	False	NA	NA	NA	75186138	75174975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.788.17	chr1	-	3423	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	18	-15	-7	15	intron_retention	FALSE	canonical	2	6	junction_6	4.27083130081252	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCGTGGCCCTGTCTTT	5252	False	NA	NA	False	ATTAAA	-28	NA	75187404	75175975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.788.2	chr1	-	4742	18	NNC	ENSMUSG00000026200.14	novel	2927	18	NA	NA	30	1258	intron_retention	FALSE	canonical	0	0	junction_16	5.77909368979536	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAACAGCCTGGTGTAG	5289	False	NA	NA	False	NA	NA	NA	75187367	75173621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024_75186148_75186377_75186467_75187234
ES.788.3	chr1	-	4076	12	NNC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	420	702	intron_retention	FALSE	canonical	2	5	junction_11	4.85151420513685	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGTGTTTTTATTCTA	7009	False	NA	NA	False	TATAAA	-22	NA	75185647	75174177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177932_75178042_75178118_75178386_75178506_75178693_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185580
ES.788.4	chr1	-	6048	11	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	12	701	intron_retention	FALSE	canonical	3	10	junction_2	3.6	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGTGTTTTTATTCT	5246	False	NA	NA	False	TATAAA	-21	NA	75187410	75174178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177932_75178042_75178506_75178693_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.5	chr1	-	3704	15	NNC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	456	701	intron_retention	FALSE	canonical	2	5	junction_14	4.69965261417028	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGTGTTTTTATTCT	7045	False	NA	NA	False	TATAAA	-21	NA	75185611	75174178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185580
ES.788.6	chr1	-	5079	8	NIC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	11	699	intron_retention	FALSE	canonical	3	10	junction_2	3.92792202424786	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGAAGTGTTTTTATT	6529	False	NA	NA	False	TATAAA	-19	NA	75186127	75174180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75178506_75178693_75179586_75184962_75185024_75185330_75185867_75186024
ES.788.8	chr1	-	4115	13	NNC	ENSMUSG00000026200.14	novel	2339	17	NA	NA	411	699	intron_retention	FALSE	canonical	2	5	junction_12	4.66071048470319	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGAAGTGTTTTTATT	7000	False	NA	NA	False	TATAAA	-19	NA	75185656	75174180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178506_75178693_75178735_75178830_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185580
ES.788.9	chr1	-	3922	16	ISM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	1311	-1807	27	696	3prime_fragment	FALSE	canonical	2	6	junction_6	4.27083130081252	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACATGAAGTGTTTTT	6545	False	NA	NA	False	TATAAA	-16	NA	75186111	75174183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024
ES.7880.1	chr12	-	3890	1	Intergenic	novelGene_6505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGACTATCCATAAGTT	NA	False	NA	NA	False	NA	NA	NA	76806304	76802414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76802400_76806300
ES.7881.1	chr12	+	672	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	0	4	0	-4	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTTTGTATGTTTTC	NA	False	NA	5	True	NA	NA	NA	76812311	76829950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ES.7881.2	chr12	+	592	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	0	113	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	214.20317457965	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAGCTAGAGTGAGATG	NA	False	NA	7	True	GATAAA	-17	NA	76812311	76830067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829728_76829924
ES.7881.3	chr12	+	1078	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	7	623	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	214.20317457965	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATTTCCATTGGTCCAT	NA	False	NA	NA	False	NA	NA	NA	76812335	76830577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829728_76829924
ES.7881.4	chr12	+	4004	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	8	3550	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	214.20317457965	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCCTCTTTGATCTC	NA	False	NA	NA	False	ATTAAA	-13	NA	76812336	76833504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829728_76829924
ES.7881.5	chr12	+	2716	5	NNC	ENSMUSG00000090258.8	novel	676	4	NA	NA	-8	2266	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	214.20317457965	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGCTGATTTCTCCTGTT	NA	False	NA	26	True	AATAAA	-17	NA	76812340	76832220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586_76829728_76829924
ES.7881.6	chr12	+	177	1	Intergenic	novelGene_6506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAATATA	NA	False	NA	NA	False	NA	NA	NA	76824274	76824451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76824300_76824500
ES.7882.1	chr12	-	175	1	Intergenic	novelGene_6507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACCCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	76826455	76826280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76826300_76826500
ES.7883.1	chr12	-	1016	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	-2	-4	-2	0	multi-exon	FALSE	canonical	3	177	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTCTCTGTCTTCCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	76842275	76839106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76839775_76841927
ES.7884.1	chr12	-	3352	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	-194	0	161	0	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGGTCTGTATGAA	NA	False	NA	-2	True	AATAAA	-18	NA	76869521	76844733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
ES.7884.2	chr12	-	3514	7	NNC	ENSMUSG00000021062.16	novel	3158	7	NA	NA	-167	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.3886357870947	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTGGGTCTGTATGA	NA	False	NA	-3	True	AATAAA	-17	NA	76869494	76844734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76847176_76847339_76847406_76848665_76848946_76849841_76849920_76850341_76850403_76851216_76851278_76868967
ES.7884.3	chr12	-	3234	8	NNC	ENSMUSG00000021062.16	novel	3158	7	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.7224579699707	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTGGGTCTGTATGA	NA	False	NA	-3	True	AATAAA	-17	NA	76869249	76844734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76857973_76858129_76868967
ES.7884.6	chr12	-	3402	8	NNC	ENSMUSG00000021062.16	novel	3158	7	NA	NA	168	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.7224579699707	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTGTGTGGGTCTGTAT	NA	False	NA	-5	True	AATAAA	-15	NA	76869514	76844736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76858068_76858129_76868967
ES.7884.8	chr12	-	3143	7	NNC	ENSMUSG00000021062.16	novel	3158	7	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24.1154629969146	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGTGTGTGGGTCTGTA	NA	False	NA	-6	True	AATAAA	-14	NA	76869297	76844737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76847176_76847339_76847425_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
ES.7885.1	chr12	-	178	1	Intergenic	novelGene_6508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATTAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	76877729	76877551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76877600_76877700
ES.7886.1	chr12	-	175	1	Intergenic	novelGene_6509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGAGTGGTCAGAGTT	NA	False	NA	NA	False	NA	NA	NA	76878619	76878444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76878400_76878600
ES.7887.1	chr12	+	2615	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	0	-2	0	2	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTTTTTTTTTTCCA	NA	False	NA	16	True	AATAAA	-17	NA	76884187	76968188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.10	chr12	+	2585	12	NNC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.5645631281617	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884233	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76884426_76909241_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.11	chr12	+	3659	12	NNC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	90.7576921130432	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884239	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76960295_76961506_76963187_76963303_76966849
ES.7887.12	chr12	+	2506	12	NIC	ENSMUSG00000033373.17	novel	430	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	92.2903252363508	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	-1	True	NA	14	True	AATAAA	-15	NA	76887063	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76887195_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.13	chr12	+	1439	12	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	21696	129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92.5645631281617	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACACGGTGGTGTGATT	6545	False	NA	NA	False	AAAACA	-21	NA	76908764	76967134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76908881_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.14	chr12	+	2277	9	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-3007	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.886758060234	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76930824	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76930960_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966852
ES.7887.15	chr12	+	3061	8	ISM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	49402	0	-242	0	3prime_fragment	FALSE	canonical	3	279	junction_1	23.4633887630261	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76933589	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.16	chr12	+	2563	6	ISM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	59265	-1	9621	1	3prime_fragment	FALSE	canonical	3	304	junction_1	14.891608375189	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTCTTTTTTTTTTCC	4782	False	NA	15	True	AATAAA	-16	NA	76943452	76968187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.17	chr12	+	2057	7	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	9836	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.658692465278	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	4997	False	NA	14	True	AATAAA	-15	NA	76943667	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76943811_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.18	chr12	+	2183	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7582	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	10007	False	NA	14	True	AATAAA	-15	NA	76948677	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.19	chr12	+	170	1	Intergenic	novelGene_6512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGACTTCATAGA	NA	False	NA	NA	False	NA	NA	NA	76950286	76950456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76950300_76950500
ES.7887.2	chr12	+	1566	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	1	1046	1	135	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGGTGTGATTTTTAAA	NA	False	NA	NA	False	AAAACA	-27	NA	76884188	76967140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.21	chr12	+	5295	2	ISM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	77021	1	4443	-1	intron_retention	FALSE	canonical	3	328	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGCTGTCTTTTTTTTTT	NA	False	NA	13	True	AATAAA	-14	NA	76961208	76968185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76961506_76963187
ES.7887.3	chr12	+	4438	1	NIC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	7	-2831	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAATTGAGATGTGAAA	NA	False	NA	NA	False	NA	NA	NA	76884194	76888632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76884200_76888600
ES.7887.4	chr12	+	2505	3	ISM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	15	45820	-4	-12213	intron_retention	FALSE	canonical	3	303	junction_1	1.5	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76884202	76922366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_76884426_76909259_76909325_76920149
ES.7887.5	chr12	+	2511	11	NIC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	95.1985294004062	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884202	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.6	chr12	+	2609	12	NNC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	92.1514204856369	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGCTGTCTTTTTTTTT	NA	False	NA	12	True	AATAAA	-13	NA	76884202	76968184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934492_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ES.7887.7	chr12	+	2603	12	NNC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	90.5501094093739	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884203	76968186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963312_76966852
ES.7888.1	chr12	+	1945	1	Intergenic	novelGene_6513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3183	False	NA	NA	False	NA	NA	NA	76969304	76971249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76969300_76971200
ES.7889.1	chr12	+	128	1	Intergenic	novelGene_6515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACACCAGCCACAGCCA	NA	False	NA	NA	False	NA	NA	NA	76980171	76980299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_76980200_76980300
ES.789.1	chr1	+	2146	5	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-8	1	intron_retention	FALSE	canonical	3	176	junction_1	31.068472765812	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGGTCAATGTGTC	NA	False	NA	10	True	AATAAA	-18	NA	75187473	75190887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75190342_75190457
ES.789.10	chr1	+	1477	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTTAGGTCAATGTG	NA	False	NA	8	True	AATAAA	-16	NA	75187487	75190885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ES.789.11	chr1	+	1195	2	FSM	ENSMUSG00000026201.13	ENSMUST00000139627.3	839	2	9	-365	7	1	multi-exon	FALSE	canonical	3	176	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCTGGTTTGGCCTTTT	NA	False	NA	NA	False	CATAAA	-15	NA	75187498	75188880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75187697_75187883
ES.789.12	chr1	+	1966	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	7	1	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTAGGTCAATGT	NA	False	NA	7	True	AATAAA	-15	NA	75187498	75190884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
ES.789.13	chr1	+	3332	6	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAGTAGCGGTCTACT	NA	False	NA	NA	False	AATAAA	-13	NA	75187498	75192250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
ES.789.14	chr1	+	1596	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.9262977118624	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTAGGTCAATG	NA	False	NA	6	True	AATAAA	-14	NA	75187500	75190883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ES.789.15	chr1	+	1617	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	11	0	intron_retention	FALSE	canonical	3	167	junction_4	31.580584752872	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187502	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
ES.789.16	chr1	+	2220	5	NIC	ENSMUSG00000026201.13	novel	1570	7	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	17	junction_1	95.3110040866216	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTTTAGGTCAATGTG	NA	False	NA	8	True	AATAAA	-16	NA	75187503	75190885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75190342_75190457
ES.789.17	chr1	+	1768	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-10	0	intron_retention	FALSE	canonical	3	176	junction_1	28.1666469427939	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187503	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189873_75190219_75190342_75190457
ES.789.18	chr1	+	2190	5	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	65	junction_1	74.9445628448122	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187508	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75189873_75190219_75190342_75190457
ES.789.2	chr1	+	665	3	FSM	ENSMUSG00000026201.13	ENSMUST00000123825.8	636	3	-32	3	-4	-3	multi-exon	FALSE	canonical	3	65	junction_1	98.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACATGCCCTGGTTTGGC	NA	False	NA	NA	False	CATAAA	-10	NA	75187485	75188875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75187669_75187883_75188059_75188568
ES.789.21	chr1	+	674	3	FSM	ENSMUSG00000026201.13	ENSMUST00000144355.8	691	3	18	-1	-4	1	multi-exon	FALSE	canonical	3	176	junction_1	43	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCTGGTTTGGCCTTTT	NA	False	NA	NA	False	CATAAA	-15	NA	75187509	75188880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75187697_75187883_75188059_75188568
ES.789.22	chr1	+	1976	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	1	intron_retention	FALSE	canonical	1	2	junction_4	83.6548796478059	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTAGGTCAATGT	NA	False	NA	7	True	AATAAA	-15	NA	75187517	75190884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188789_75189243_75189378_75189529_75189651_75189756_75189873_75190219_75190342_75190457
ES.789.23	chr1	+	1599	7	NIC	ENSMUSG00000026201.13	novel	1570	7	NA	NA	1	0	intron_retention	FALSE	canonical	3	65	junction_1	61.7641121975825	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187518	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189651_75189776_75189873_75190219_75190342_75190457
ES.789.24	chr1	+	1977	5	NIC	ENSMUSG00000026201.13	novel	1570	7	NA	NA	2	-85	intron_retention	FALSE	canonical	3	65	junction_1	75.0612250099877	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGCTGGGTGCACATC	NA	False	NA	-79	True	AATGAA	-22	NA	75187525	75190798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75190342_75190457
ES.789.25	chr1	+	1856	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	117	903	75	461	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACTTCCTGCCCTATTT	NA	False	NA	NA	False	NA	NA	NA	75187598	75191347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ES.789.27	chr1	+	1436	5	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-225	0	intron_retention	FALSE	canonical	3	167	junction_2	21.9260119492807	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75188380	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
ES.789.3	chr1	+	1607	7	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-4	1	intron_retention	FALSE	canonical	3	65	junction_1	62.3905708687886	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGGTCAATGTGTC	NA	False	NA	10	True	AATAAA	-18	NA	75187485	75190887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
ES.789.4	chr1	+	1305	6	NIC	ENSMUSG00000026201.13	novel	1570	7	NA	NA	-4	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	101.113006087249	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTAGGTCAATGTGTC	NA	False	NA	10	True	AATAAA	-18	NA	75187485	75190887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189697_75189873_75190219_75190342_75190457
ES.789.5	chr1	+	1739	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	17	junction_1	78.7691775590766	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187486	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
ES.789.6	chr1	+	1437	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	93.2749817594312	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187486	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189697_75189873_75190219_75190342_75190457
ES.789.7	chr1	+	1485	8	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	-3	-11	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	87.4147981681335	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGACCGTGTATATT	NA	False	NA	-5	True	AATAAA	-3	NA	75187486	75190872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189756_75189873_75190219_75190342_75190457
ES.789.8	chr1	+	1507	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	5	1364	-3	0	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187486	75190886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ES.789.9	chr1	+	1428	7	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	-3	17	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	75.900519687871	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGGAGGGAAAGAATGA	NA	False	NA	26	True	AATAAA	-34	NA	75187486	75190903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75190219_75190342_75190457
ES.7890.1	chr12	-	3760	1	Intergenic	novelGene_6510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	9031	False	NA	NA	False	NA	NA	NA	76928807	76925047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76925000_76928800
ES.7891.1	chr12	-	177	1	Intergenic	novelGene_6511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAAAATAAAATG	7314	False	NA	NA	False	NA	NA	NA	76932772	76932595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76932600_76932800
ES.7892.1	chr12	-	6096	1	Antisense	novelGene_ENSMUSG00000033373.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGGCTGGGCATGTTG	5048	False	NA	NA	False	NA	NA	NA	76957161	76951065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_76951100_76957200
ES.7893.1	chr12	-	2891	4	NNC	ENSMUSG00000059436.14	novel	819	2	NA	NA	4	19394	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	27.1579740694249	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATATTAAAAAATGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	77008971	76964648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76967100_76986740_76986865_76999942_77000051_77008763
ES.7893.10	chr12	-	2044	6	NIC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-5	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.3032186618072	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008980	76984046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ES.7893.11	chr12	-	2699	4	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-13	1	intron_retention	FALSE	canonical	3	20	junction_1	20.7257220756131	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008988	76984046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
ES.7893.12	chr12	-	1992	5	NNC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.5714979643834	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGTAGTAGTGTCTTCT	NA	False	NA	-4	True	AATAAA	-16	NA	77008971	76984046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985530_76986219_76986289_76986740_76986865_76999942_77000051_77008763
ES.7893.14	chr12	-	169	1	ISM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	24341	407	2150	-402	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTCTGTGTGTATTT	NA	False	NA	-1	True	CATAAA	-18	NA	76984618	76984449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_76984400_76984600
ES.7893.2	chr12	-	232	1	Intergenic	novelGene_6514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGATTGTCCCCATGT	4305	False	NA	43	True	NA	NA	NA	76978519	76978287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_76978300_76978500
ES.7893.3	chr12	-	1955	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	-27	-2	-27	2	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77009002	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
ES.7893.4	chr12	-	2686	4	NNC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	8	2	intron_retention	FALSE	non_canonical	0	0	junction_2	23.1708629293104	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008951	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76986289_76986740_76986888_76999942_77000051_77008763
ES.7893.5	chr12	-	2011	5	NNC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	26.5988721565408	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008957	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985530_76986187_76986289_76986740_76986865_76999942_77000051_77008763
ES.7893.6	chr12	-	2061	6	NNC	ENSMUSG00000059436.14	novel	1942	5	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	22.6927301134086	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008980	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985530_76986187_76986289_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ES.7893.7	chr12	-	1938	4	NNC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.9131825880731	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008960	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985530_76986740_76986890_76999942_77000051_77008763
ES.7893.8	chr12	-	1836	4	NNC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-181	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.9865869364129	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77009156	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985530_76986740_76986865_76999942_77000051_77009036
ES.7893.9	chr12	-	2167	4	NNC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.9369708257569	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTAGTAGTGTCTTCTT	NA	False	NA	-3	True	AATAAA	-17	NA	77008977	76984045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_76985767_76986740_76986865_76999942_77000051_77008763
ES.7894.1	chr12	-	135	1	Intergenic	novelGene_6516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	77015660	77015525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_77015500_77015700
ES.7895.1	chr12	-	2256	5	NNC	ENSMUSG00000112030.2	novel	789	2	NA	NA	-3274	1059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.866025403784439	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTTGTTGTTGTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	77092249	77085311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_77086801_77088616_77089085_77089980_77090081_77090977_77091061_77092133
ES.7896.1	chr12	-	8214	1	Intergenic	novelGene_6517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTTTGCATTTGGTGA	8529	False	NA	NA	False	NA	NA	NA	77105113	77096899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_77096900_77105100
ES.7897.1	chr12	+	159	1	Intergenic	novelGene_6518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	8451	False	NA	NA	False	NA	NA	NA	77186198	77186357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77186200_77186400
ES.7898.1	chr12	-	177	1	Intergenic	novelGene_6519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	77196342	77196165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_77196200_77196300
ES.7899.1	chr12	+	176	1	Intergenic	novelGene_6520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAG	7793	False	NA	NA	False	NA	NA	NA	77197197	77197373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77197200_77197400
ES.79.1	chr1	-	1005	4	NNC	ENSMUSG00000098234.8	novel	473	4	NA	NA	-40	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	295.388256743937	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCGGACTTTTTGTCAA	NA	False	NA	0	True	AATAAA	-14	NA	10014383	10012184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10012381_10012547_10012617_10012834_10012943_10013751
ES.79.10	chr1	-	381	4	NNC	ENSMUSG00000098234.8	novel	473	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	291.699998095456	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10012381_10012547_10012617_10012834_10012917_10014244
ES.79.11	chr1	-	604	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182498.8	559	3	-46	1	-31	-1	multi-exon	FALSE	canonical	3	370	junction_2	159	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTGTGGGCAGTAAT	NA	False	NA	-16	True	AATAAA	-11	NA	10014374	10012250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10012617_10012834_10012943_10014244
ES.79.12	chr1	-	481	4	NNC	ENSMUSG00000098234.8	novel	473	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	295.388256743937	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGCTGTGGGCAGTAA	NA	False	NA	-17	True	AATAAA	-10	NA	10014343	10012251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10012381_10012547_10012617_10012834_10012943_10014168
ES.79.13	chr1	-	699	4	NNC	ENSMUSG00000098234.8	novel	473	4	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	295.388256743937	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTGCTGTGGGCAGTA	NA	False	NA	-18	True	AATAAA	-9	NA	10014317	10012252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10012381_10012547_10012617_10012834_10012943_10013923
ES.79.2	chr1	-	2143	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1618	-438	-1618	438	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014392	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10012200_10014400
ES.79.3	chr1	-	469	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	-62	66	-62	0	multi-exon	FALSE	canonical	3	370	junction_3	129.892263049036	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014405	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
ES.79.4	chr1	-	401	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	-1	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
ES.79.5	chr1	-	1893	2	ISM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	27	0	13	0	intron_retention	FALSE	canonical	3	144	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014315	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10012375_10012547
ES.79.6	chr1	-	1681	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	-867	2	13	0	multi-exon	FALSE	canonical	3	538	junction_1	75	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014315	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10012381_10012547_10012617_10012834
ES.79.8	chr1	-	1691	3	ISM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	11	0	-3	0	intron_retention	FALSE	canonical	3	144	junction_1	272	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014331	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10012375_10012547_10012617_10012834
ES.79.9	chr1	-	299	3	NIC	ENSMUSG00000098234.8	novel	473	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	16	junction_2	261	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014343	10012249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10012381_10012547_10012617_10014244
ES.790.1	chr1	+	387	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTGTGTTTTCATT	6300	False	NA	NA	False	NA	NA	NA	75198486	75198873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75198500_75198900
ES.7900.1	chr12	+	2995	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	-123	-107	-100	0	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77284798	77522763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.11	chr12	+	3241	12	NNC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-63	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.3538361974368	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77285523	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411798_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.12	chr12	+	3428	13	NNC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-53	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.1807708664334	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77285533	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77402072_77402214_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.13	chr12	+	2759	10	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-52	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	33.332592584362	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77285534	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.14	chr12	+	3187	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-279	450	-27	6	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGGAAGTTTTGTAAAA	NA	False	NA	-88	True	AATAAA	-42	NA	77285559	77522662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.15	chr12	+	2916	10	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	62	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	32.9545141065682	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTGTGAAGTTTCTG	NA	False	NA	9	True	AATAAA	-10	NA	77285648	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.16	chr12	+	2902	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-93	-22	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAATGAAATAT	NA	False	NA	NA	False	AATAAA	-14	NA	77285723	77522634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.18	chr12	+	2972	12	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	6	-23	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	37.7370195514709	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77285844	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77325717_77325807_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.19	chr12	+	2431	10	NNC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	18	-23	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	40.3148105615949	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77285856	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77286028_77324134_77324230_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510979_77521772
ES.7900.2	chr12	+	3036	10	NIC	ENSMUSG00000021065.17	novel	2765	12	NA	NA	-68	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	35.749125863439	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGGTGGCATCTCTT	NA	False	NA	NA	False	TATAAA	-16	NA	77284830	77523115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.20	chr12	+	3042	11	NNC	ENSMUSG00000021065.17	novel	2980	13	NA	NA	222	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.2318412115222	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77286060	77522763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77286376_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.21	chr12	+	3748	1	Intergenic	novelGene_6523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	77392411	77396159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77392400_77396200
ES.7900.22	chr12	+	3323	1	FSM	ENSMUSG00000064833.3	ENSMUST00000082899.3	160	1	-2042	-1121	-2042	1121	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77463148	77466471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_77463100_77466500
ES.7900.3	chr12	+	2996	13	NNC	ENSMUSG00000021065.17	novel	2980	13	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.2753810364146	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTGTGAAGTTTCTG	NA	False	NA	9	True	AATAAA	-10	NA	77284846	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77284974_77324134_77324230_77357583_77357637_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.4	chr12	+	2835	11	NIC	ENSMUSG00000021065.17	novel	2980	13	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	30.4065782356384	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTGTGAAGTTTCTG	NA	False	NA	9	True	AATAAA	-10	NA	77284861	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77284974_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.5	chr12	+	2955	13	FSM	ENSMUSG00000021065.17	ENSMUST00000177595.9	2980	13	2	23	2	-23	multi-exon	FALSE	canonical	2	4	junction_3	37.3482113211448	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATAAATTTCAA	NA	False	NA	-14	True	NA	NA	NA	77284900	77522736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_77284974_77324134_77324230_77325717_77325807_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.6	chr12	+	3388	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	-379	349	-127	0	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77285459	77522763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.7	chr12	+	3250	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77285504	77522763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7900.8	chr12	+	3288	12	NNC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	30.1746979553104	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTGTGAAGTTTCTG	NA	False	NA	9	True	AATAAA	-10	NA	77285508	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510880_77510985_77521772
ES.7900.9	chr12	+	3412	13	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	35.4764201814232	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTTGTGAAGTTTCTG	NA	False	NA	9	True	AATAAA	-10	NA	77285520	77522759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_77286028_77324134_77324230_77325717_77325807_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ES.7901.1	chr12	-	3445	1	Intergenic	novelGene_6521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCACACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	77291222	77287777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_77287800_77291200
ES.7902.1	chr12	-	164	1	Intergenic	novelGene_6522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	77351132	77350968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_77351000_77351100
ES.7903.1	chr12	+	2415	6	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-241	69664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.42967024840268	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTATATCACGCATTTT	NA	False	NA	NA	False	NA	NA	NA	77599879	77686147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616486_77673373_77673440_77678055_77678361_77684209_77684294_77685091
ES.7903.10	chr12	+	1801	5	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	194	69704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.32717544487642	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATAATTGGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	77600314	77686187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616486_77678208_77678361_77684209_77684294_77685091
ES.7903.11	chr12	+	1345	1	Intergenic	novelGene_6524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCCACAACTGCTGCTA	NA	False	NA	NA	False	NA	NA	NA	77672200	77673545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77672200_77673500
ES.7903.12	chr12	+	3995	3	Intergenic	novelGene_6525	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCAGTATAATTGGTTT	NA	False	NA	NA	False	NA	NA	NA	77675414	77686183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77678361_77684209_77684294_77685218
ES.7903.2	chr12	+	2049	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-241	69669	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	4.92160768674447	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCACGCATTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	77599879	77686152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616486_77684209_77684294_77685091
ES.7903.3	chr12	+	1901	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-20	69670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.84573486395988	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACGCATTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	77600100	77686153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616486_77684209_77684294_77685019
ES.7903.4	chr12	+	1757	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	-19	69670	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	2.16024689946929	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACGCATTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	77600101	77686153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685218
ES.7903.5	chr12	+	1728	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	176	69709	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGGTTTCCTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	77600296	77686192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685091
ES.7903.6	chr12	+	3038	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	176	71146	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	2.16024689946929	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCCCAAGTCTCATTTC	NA	False	NA	NA	False	NA	NA	NA	77600296	77687629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77685218
ES.7903.7	chr12	+	1496	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	186	69670	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	4.92160768674447	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACGCATTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	77600306	77686153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616486_77684209_77684294_77685218
ES.7903.8	chr12	+	3956	3	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	188	71151	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	2	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTCTCATTTCCATTG	NA	False	NA	NA	False	NA	NA	NA	77600308	77687634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616542_77684209
ES.7903.9	chr12	+	1518	4	NNC	ENSMUSG00000112392.2	novel	661	2	NA	NA	192	73465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.17856276425687	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAATAGCTTGATGGG	NA	False	NA	NA	False	AATAAA	-37	NA	77600312	77689948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_77600570_77616271_77616542_77684209_77684294_77689041
ES.7904.1	chr12	+	3474	1	Intergenic	novelGene_6526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAAAGTTTGGGGAGC	NA	False	NA	NA	False	NA	NA	NA	77692549	77696023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_77692500_77696000
ES.7905.1	chr12	+	3827	21	NNC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	-174	-8846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	18.2682100929456	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGAATTATAGCAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	78272978	78722021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78720751
ES.7905.10	chr12	+	2106	19	ISM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	55	20086	55	-19412	5prime_fragment	FALSE	canonical	3	35	junction_9	14.8183444869302	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTCATATGTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	78273481	78711455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264
ES.7905.11	chr12	+	1304	11	NNC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	67	-108351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	23.5008510484195	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTCCTAAGAATTTTC	NA	False	NA	NA	False	NA	NA	NA	78273493	78622516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78622285
ES.7905.12	chr12	+	2568	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	74	658	74	16	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTCTGATTATATCAA	NA	False	NA	NA	False	AATAAA	-14	NA	78273500	78730883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.13	chr12	+	2335	21	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	82	172	combination_of_known_splicesites	FALSE	canonical	3	3	junction_6	17.2536952563791	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGCTGTCTGCTTCT	NA	False	NA	NA	False	AATACA	-16	NA	78273508	78731039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.14	chr12	+	2627	19	ISM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	83	19537	83	-18863	5prime_fragment	FALSE	canonical	3	35	junction_9	14.8183444869302	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCCCTGAATCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	78273509	78712004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264
ES.7905.15	chr12	+	2197	20	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	83	170	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.7922763285901	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCAAGGCTGTCTGCTT	NA	False	NA	NA	False	AATACA	-14	NA	78273509	78731037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.17	chr12	+	6040	1	NIC	ENSMUSG00000047454.13	novel	3570	24	NA	NA	103	-451298	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTAAGAAAGAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	78273529	78279569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273500_78279600
ES.7905.18	chr12	+	168	1	Intergenic	novelGene_6528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	78603106	78603274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78603100_78603300
ES.7905.19	chr12	+	3732	1	Intergenic	novelGene_6529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78640943	78644675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78640900_78644700
ES.7905.2	chr12	+	3568	22	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	-127	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	17.4723623678087	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGCGGCCTTGTTA	NA	False	NA	26	True	AATAAA	-29	NA	78273025	78731546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.3	chr12	+	3702	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-393	-9	-119	4	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCGGCCTTGTTATTTA	NA	False	NA	30	True	AATAAA	-33	NA	78273033	78731550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.4	chr12	+	2278	14	ISM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-291	60904	-17	-60230	5prime_fragment	FALSE	canonical	3	35	junction_9	16.0461612213273	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTTGTGTCAATTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	78273135	78670637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077
ES.7905.5	chr12	+	1949	14	ISM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-81	61023	-81	-60349	5prime_fragment	FALSE	canonical	3	35	junction_9	16.0461612213273	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAATCAGAGTTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	78273345	78670518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077
ES.7905.6	chr12	+	2804	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	-6	502	-6	172	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGCTGTCTGCTTCT	NA	False	NA	NA	False	AATACA	-16	NA	78273420	78731039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.7	chr12	+	3203	22	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.0281879151444	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGCGGCCTTGTTA	NA	False	NA	26	True	AATAAA	-29	NA	78273449	78731546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.8	chr12	+	3139	22	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	17.5868431548756	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273479	78731541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7905.9	chr12	+	2731	20	NIC	ENSMUSG00000047454.13	novel	3300	23	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	17.7922763285901	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273479	78731541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ES.7906.1	chr12	-	5123	1	Intergenic	novelGene_6527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	78458143	78453020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_78453000_78458100
ES.7907.1	chr12	-	176	1	Intergenic	novelGene_6530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAGAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	78680444	78680268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_78680300_78680400
ES.7908.1	chr12	+	5368	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-98	4	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795582	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.10	chr12	+	3138	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-10	604	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAATAAAGTTTTATACA	NA	False	NA	NA	False	AATAAA	-16	NA	78795670	78885459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.11	chr12	+	5371	16	NNC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-9	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.8021849802798	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATTGTAAAAGCCACT	NA	False	NA	6	True	AATAAA	-15	NA	78795671	78887350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78795720_78820456_78820563_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.12	chr12	+	6099	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-9	696	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATAACCTAAATGTGGC	NA	False	NA	NA	False	AATATA	-34	NA	78795671	78888184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.13	chr12	+	5072	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	7	-187	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGAATGTAATTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	78795687	78887173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.14	chr12	+	5268	15	FSM	ENSMUSG00000021112.10	ENSMUST00000219197.2	5283	15	8	7	8	-7	multi-exon	FALSE	canonical	2	6	junction_6	36.460840049879	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAAAAGCCACTGGA	NA	False	NA	9	True	AATAAA	-18	NA	78795688	78887353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865960_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.15	chr12	+	4637	13	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	8	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	40.6557362359715	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAAAAGCCACTGGA	NA	False	NA	9	True	AATAAA	-18	NA	78795688	78887353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.16	chr12	+	4288	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	8	-970	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGCATGGATGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	78795688	78886390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.17	chr12	+	5386	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGTGTCCTTTATTGG	NA	False	NA	NA	False	AATACA	-15	NA	78795688	78887488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.18	chr12	+	3248	15	NNC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-9	614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.5342020899687	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTATACATACATACACA	NA	False	NA	NA	False	AATAAA	-26	NA	78795690	78885469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856618_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.19	chr12	+	5415	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-65	120	1	8	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACACTTTCTTATGTTT	NA	False	NA	24	True	AATAAA	-33	NA	78795700	78887368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.2	chr12	+	5076	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-43	4	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795637	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.20	chr12	+	2697	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-65	2838	1	-205	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTTGCCTCTGGGTCAG	NA	False	NA	NA	False	NA	NA	NA	78795700	78884650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.21	chr12	+	5312	14	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	14	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	47.585612663329	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAAAGCCACTGGACAC	NA	False	NA	12	True	AATAAA	-21	NA	78795713	78887356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.22	chr12	+	4075	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-46	1441	20	1192	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACATTCTTGGGTTGA	NA	False	NA	NA	False	NA	NA	NA	78795719	78886047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.23	chr12	+	5148	15	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	27	4	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	41.9492526264577	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795726	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795881_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.24	chr12	+	4853	14	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	29	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	47.1126058835222	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCACTGGACACTTT	NA	False	NA	15	True	AATAAA	-24	NA	78795728	78887359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795881_78841018_78841108_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.25	chr12	+	5373	15	NNC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	181	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.6939880444333	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795946	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78796089_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.26	chr12	+	5221	14	ISM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	45252	135	-35231	-7	3prime_fragment	FALSE	canonical	3	104	junction_6	15.919917932648	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAAAAGCCACTGGA	NA	False	NA	9	True	AATAAA	-18	NA	78841017	78887353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.27	chr12	+	5220	14	NNC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	-35231	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.0805570690644	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCACTGGACACTTTCT	NA	False	NA	17	True	AATAAA	-26	NA	78841017	78887361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78841108_78843639_78844165_78856534_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.28	chr12	+	4620	12	ISM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	60757	124	-19726	4	3prime_fragment	FALSE	canonical	3	104	junction_4	17.1642526853905	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78856522	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.29	chr12	+	5318	1	Intergenic	novelGene_6532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTTCTTTTTAAAGAT	NA	False	NA	NA	False	TTTAAA	-10	NA	78858518	78863836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78858500_78863800
ES.7908.3	chr12	+	3890	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-43	1086	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGAGTGTTTGTGATGTC	NA	False	NA	NA	False	NA	NA	NA	78795637	78885941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.30	chr12	+	3678	5	ISM	ENSMUSG00000021112.10	ENSMUST00000219197.2	5283	15	77352	7	-3216	-7	3prime_fragment	FALSE	canonical	3	129	junction_1	12.3592070943083	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTAAAAGCCACTGGA	NA	False	NA	9	True	AATAAA	-18	NA	78873032	78887353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.31	chr12	+	204	1	Intergenic	novelGene_6533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGATTTCATAAGAAC	NA	False	NA	NA	False	NA	NA	NA	78877021	78877225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78877000_78877200
ES.7908.32	chr12	+	3291	1	FSM	ENSMUSG00000021112.10	ENSMUST00000219180.2	3619	1	1340	-1012	1340	1012	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTGGTGTTGATGTC	NA	False	NA	NA	False	ACTAAA	-33	NA	78882576	78885867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78882600_78885900
ES.7908.4	chr12	+	4782	14	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-37	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	38.8564342832317	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795643	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.5	chr12	+	3990	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-29	1200	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGGGTTGAGGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	78795651	78886055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.6	chr12	+	3418	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-28	629	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTGAGGAAATACTGA	NA	False	NA	NA	False	AATAAA	-41	NA	78795652	78885484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.7	chr12	+	5122	14	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	38.3883919831667	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGCCACTGGACACTT	NA	False	NA	14	True	AATAAA	-23	NA	78795654	78887358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78877626_78877830_78879138_78879250_78884231
ES.7908.8	chr12	+	3945	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	-96	1621	-11	1012	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTGGTGTTGATGTC	NA	False	NA	NA	False	ACTAAA	-33	NA	78795669	78885867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7908.9	chr12	+	6722	14	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	-10	4	intron_retention	FALSE	canonical	3	106	junction_1	15.6394282496622	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGACACTTTCTTAT	NA	False	NA	20	True	AATAAA	-29	NA	78795670	78887364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ES.7909.1	chr12	+	181	1	Intergenic	novelGene_6534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTGATAAAGTT	3464	False	NA	NA	False	NA	NA	NA	78891187	78891368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78891200_78891400
ES.791.1	chr1	-	3298	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	41	-499	-10	499	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGGCGTCCCTCTCTTC	NA	False	NA	NA	False	NA	NA	NA	75195897	75190372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ES.791.10	chr1	-	1132	4	NNC	ENSMUSG00000026202.14	novel	2840	4	NA	NA	-10	60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	133.627176211361	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTCCCCTTTGTAAC	NA	False	NA	-17	True	AATAAA	-17	NA	75195897	75192195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75192895_75193470_75193620_75193855_75194079_75195836
ES.791.11	chr1	-	3460	2	ISM	ENSMUSG00000026202.14	ENSMUST00000187103.2	815	3	-8	-879	-8	56	intron_retention	FALSE	canonical	3	248	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTCTTGTCCCCTTTG	NA	False	NA	-21	True	AATAAA	-13	NA	75195895	75192199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75193620_75193855
ES.791.12	chr1	-	1743	3	FSM	ENSMUSG00000026202.14	ENSMUST00000187103.2	815	3	-49	-879	2	56	multi-exon	FALSE	canonical	3	248	junction_1	30.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTCTTGTCCCCTTTG	NA	False	NA	-21	True	AATAAA	-13	NA	75195936	75192199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75193620_75193855_75194079_75195836
ES.791.4	chr1	-	3298	6	Fusion	ENSMUSG00000096094.3_ENSMUSG00000026202.14	novel	2840	4	NA	NA	10	-3	multi-exon	FALSE	canonical	1	1	junction_4	121.754835632923	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTGTGCTTTCTTTT	9199	False	NA	-5	True	ATTAAA	-17	NA	75200288	75191618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_75193238_75193470_75193620_75193855_75194079_75196069_75197218_75199937_75200075_75200266
ES.791.6	chr1	-	1509	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	10	1321	10	63	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCCTTTGTAACTGC	NA	False	NA	-14	True	AATAAA	-20	NA	75195928	75192192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ES.791.7	chr1	-	3235	3	ISM	ENSMUSG00000026202.14	ENSMUST00000079464.13	2083	4	-629	578	-10	62	intron_retention	FALSE	canonical	3	248	junction_2	2.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75195897	75192193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75193238_75193470_75193620_75193855
ES.791.8	chr1	-	2390	1	NIC	ENSMUSG00000026202.14	novel	2840	4	NA	NA	-505	62	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75194583	75192193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75192200_75194600
ES.791.9	chr1	-	3469	2	ISM	ENSMUSG00000026202.14	ENSMUST00000079464.13	2083	4	-627	578	-8	62	intron_retention	FALSE	canonical	3	253	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCCCCTTTGTAACTG	NA	False	NA	-15	True	AATAAA	-19	NA	75195895	75192193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75193238_75193470
ES.7910.1	chr12	+	1903	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	-183	1685	-183	-1685	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTTCCTTCTTGTCA	NA	False	NA	28	True	AATAAA	-21	NA	78908409	78932099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.10	chr12	+	3078	7	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	233	1483	-33	-1483	intron_retention	FALSE	canonical	3	3896	junction_3	442.728064266191	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTACTTGAAAGCAGTGA	NA	False	NA	24	True	ATTAAA	-17	NA	78908825	78932301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031
ES.7910.11	chr12	+	1400	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-29	-1691	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1484.77762960485	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908829	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913370_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.13	chr12	+	3500	7	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-24	-1691	intron_retention	FALSE	canonical	3	3896	junction_3	426.34978467086	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908834	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78930176_78931564
ES.7910.14	chr12	+	7421	6	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-23	478	intron_retention	FALSE	canonical	3	3896	junction_3	306.159435588714	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAACATTGAAACTGCTTT	NA	False	NA	NA	False	AATAAA	-43	NA	78908835	78934262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78928004_78930031_78930176_78931564
ES.7910.15	chr12	+	1320	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-19	-1691	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1575.56288613412	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908839	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.16	chr12	+	1445	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-14	-1691	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1595.8539010415	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908844	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913542_78921337_78921409_78923873_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.17	chr12	+	2351	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-13	-799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1505.69280277437	944	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTCTAACCTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	78908845	78932985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926726_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.18	chr12	+	855	5	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	255	6786	-11	-950	5prime_fragment	FALSE	canonical	3	3896	junction_3	502.726752321776	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGGGGAGAGTTAT	NA	False	NA	NA	False	AATAAA	-28	NA	78908847	78926998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724
ES.7910.19	chr12	+	1657	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-11	-1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1952.54080863243	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908847	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913542_78921337_78921418_78921503_78921702_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.2	chr12	+	4437	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	212	-1244	-54	1244	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATACAGACTTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	78908804	78935028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.20	chr12	+	5239	6	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-10	-1691	intron_retention	FALSE	canonical	3	3896	junction_3	306.159435588714	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908848	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78928004_78930031_78930176_78931564
ES.7910.21	chr12	+	1434	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-9	-1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1560.62019330621	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908849	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930054_78930176_78931564
ES.7910.23	chr12	+	1347	7	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-8	-1693	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	1610.91979419626	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTAGGCTTCTTCCT	NA	False	NA	20	True	AATAAA	-13	NA	78908850	78932091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78927905_78928004_78930031_78930176_78931564
ES.7910.24	chr12	+	1100	6	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-2	-1692	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2133.02301909754	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTAGGCTTCTTCCTT	NA	False	NA	21	True	AATAAA	-14	NA	78908856	78932092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78921337_78921418_78923865_78924018_78927905_78928004_78930031_78930176_78931564
ES.7910.25	chr12	+	4306	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	0	1244	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1484.77762960485	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATACAGACTTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	78908858	78935028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913370_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.26	chr12	+	6387	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	8	459	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1575.90074016644	945	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTGAAACTAACTAAAAC	NA	False	NA	NA	False	AATAAA	-24	NA	78908866	78934243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78911752_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.27	chr12	+	1191	7	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	11	-1693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2025.31393999932	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTAGGCTTCTTCCT	NA	False	NA	20	True	AATAAA	-13	NA	78908869	78932091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78921337_78921418_78923865_78924018_78926726_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.28	chr12	+	2498	7	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-21	-1691	intron_retention	FALSE	canonical	3	3896	junction_3	425.526242825673	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908882	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78928004_78930031_78930176_78931564
ES.7910.29	chr12	+	7439	5	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-17	-1481	intron_retention	FALSE	canonical	3	3896	junction_3	268.847889149236	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTTGAAAGCAGTGATA	NA	False	NA	26	True	ATTAAA	-19	NA	78908886	78932303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78930176_78931564
ES.7910.3	chr12	+	1713	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	214	1478	-52	-1478	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAAAGCAGTGATAACT	NA	False	NA	29	True	ATTAAA	-22	NA	78908806	78932306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.30	chr12	+	1844	8	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	214	-1691	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1576.57646403172	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78909117	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78909610_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.31	chr12	+	4821	2	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	19437	-455	19126	455	3prime_fragment	FALSE	canonical	3	4448	junction_1	0	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGATTTGAAACTAACTA	NA	False	NA	NA	False	AATAAA	-20	NA	78928029	78934239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78930176_78931564
ES.7910.32	chr12	+	1711	1	Genic_Genomic	ENSMUSG00000021116.11	novel	NA	NA	NA	NA	24568	1398	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCTG	NA	False	NA	NA	False	NA	NA	NA	78933471	78935182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_78933500_78935200
ES.7910.4	chr12	+	3663	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	225	-483	-41	483	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAACTGCTTTTTTTA	NA	False	NA	NA	False	AATAGA	-44	NA	78908817	78934267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.5	chr12	+	4195	7	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-40	-1691	intron_retention	FALSE	canonical	3	3896	junction_3	288.777740370225	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTAGGCTTCTTCCTTC	NA	False	NA	22	True	AATAAA	-15	NA	78908818	78932093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78926832_78927905_78928004_78930031_78930176_78931564
ES.7910.6	chr12	+	2879	7	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	226	1689	-40	-1689	intron_retention	FALSE	canonical	3	3896	junction_3	442.728064266191	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908818	78932095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031
ES.7910.9	chr12	+	1611	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	-33	-1484	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1484.77762960485	943	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTACTTGAAAGCAGTG	NA	False	NA	23	True	ATTAAA	-16	NA	78908825	78932300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_78908955_78913299_78913370_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ES.7911.1	chr12	-	3633	6	NNC	ENSMUSG00000021114.10	novel	634	2	NA	NA	-90	133652	intron_retention	FALSE	non_canonical	0	0	junction_1	429.651207376402	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAGAAGCAGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	78908502	78753846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78753895_78893549_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.10	chr12	-	2588	8	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	55	13	intron_retention	FALSE	canonical	3	904	junction_7	87.6938086847222	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	24	False	NA	-8	True	AGTAAA	-9	NA	78908357	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.11	chr12	-	1294	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-41	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	342.953349597289	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	71	False	NA	-8	True	AGTAAA	-9	NA	78908310	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904007_78904119_78908192
ES.7911.12	chr12	-	1336	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-389	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	345.416030859889	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	NA	False	NA	-8	True	AGTAAA	-9	NA	78908801	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908648
ES.7911.13	chr12	-	1250	8	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	35	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	366.482006685853	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	4	True	NA	-8	True	AGTAAA	-9	NA	78908377	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78908192
ES.7911.14	chr12	-	2982	8	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-35	13	intron_retention	FALSE	non_canonical	0	0	junction_3	368.78426855642	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	77	False	NA	-8	True	AGTAAA	-9	NA	78908304	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894883_78894997_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.15	chr12	-	3109	7	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-47	13	intron_retention	FALSE	canonical	3	904	junction_6	88.3037686373325	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	65	False	NA	-8	True	AGTAAA	-9	NA	78908316	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78890385_78891999_78892079_78894540_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.16	chr12	-	1239	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	14	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	333.710578196137	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	126	False	NA	-8	True	AGTAAA	-9	NA	78908255	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897252_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.18	chr12	-	1398	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-48	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	344.349295773928	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	64	False	NA	-8	True	AGTAAA	-9	NA	78908317	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894450_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.19	chr12	-	1335	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-57	13	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	342.574809348265	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	55	False	NA	-8	True	AGTAAA	-9	NA	78908326	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896495_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.2	chr12	-	229	1	Intergenic	novelGene_6531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGATGTCATAATGA	9003	False	NA	NA	False	NA	NA	NA	78852635	78852406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_78852400_78852600
ES.7911.20	chr12	-	948	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	94	2625	-49	-348	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTTGTAAGACTTTTT	63	False	NA	NA	False	NA	NA	NA	78908318	78890123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.21	chr12	-	817	8	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	87	4378	-56	-2101	5prime_fragment	FALSE	canonical	3	904	junction_7	92.3484969989181	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGCAAGAAATAA	56	False	NA	NA	False	AATGAA	-36	NA	78908325	78891876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.3	chr12	-	2017	10	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-42	8965	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	325.989774890768	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGCACAAACCTCTGCC	70	False	NA	NA	False	AATAAA	-30	NA	78908311	78878533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78879666_78890179_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.4	chr12	-	3661	1	Genic_Genomic	ENSMUSG00000021114.10	novel	NA	NA	NA	NA	3323	2317	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAAAAATGTCAGCAT	NA	False	NA	NA	False	AATAAA	-18	NA	78888842	78885181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_78885200_78888800
ES.7911.5	chr12	-	587	1	Antisense	novelGene_ENSMUSG00000021112.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCTCAATGACTTACT	NA	False	NA	NA	False	AATAAA	-20	NA	78886135	78885548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_78885500_78886100
ES.7911.6	chr12	-	1374	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	36	2257	36	20	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTCTTTTTCTTTTT	5	True	NA	-1	True	AGTAAA	-16	NA	78908376	78889755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ES.7911.7	chr12	-	1548	11	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-50	13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	471.027430199134	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGTTGTTTCTTTT	62	False	NA	-8	True	AGTAAA	-9	NA	78908319	78889762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78907638_78907707_78907802_78907973_78908192
ES.7912.1	chr12	-	1595	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	-12	0	-12	0	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTCTTGTAGTTA	NA	False	NA	0	True	AATAAA	-21	NA	78953750	78935464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ES.7912.2	chr12	-	1434	8	NIC	ENSMUSG00000021118.8	novel	1583	9	NA	NA	-18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	20.6427335636439	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	False	NA	-2	True	AATAAA	-19	NA	78953756	78935466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78953664
ES.7912.3	chr12	-	3447	8	NIC	ENSMUSG00000021118.8	novel	1583	9	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	37	junction_5	9.11603207631075	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	False	NA	-2	True	AATAAA	-19	NA	78953740	78935466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78936082_78936685_78936765_78938902_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ES.7912.4	chr12	-	1419	8	NIC	ENSMUSG00000021118.8	novel	1583	9	NA	NA	-30	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.3084522044262	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTTATGGTTCTTG	NA	False	NA	-6	True	AATAAA	-15	NA	78953768	78935470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ES.7912.5	chr12	-	2497	1	NIC	ENSMUSG00000021118.8	novel	1583	9	NA	NA	4976	-10801	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78948762	78946265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_78946300_78948800
ES.7913.1	chr12	-	170	1	Intergenic	novelGene_6535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	78960297	78960127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_78960100_78960300
ES.7914.1	chr12	+	4664	1	Intergenic	novelGene_6536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAACCAGAATCCTGAT	NA	False	NA	NA	False	NA	NA	NA	78966156	78970820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_78966200_78970800
ES.7915.1	chr12	-	161	1	Intergenic	novelGene_6537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAACAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	78995196	78995035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_78995000_78995200
ES.7916.1	chr12	+	469	1	Intergenic	novelGene_6538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAACCAGAGGATG	5482	False	NA	NA	False	NA	NA	NA	79045960	79046429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79046000_79046400
ES.7917.1	chr12	-	3768	3	NNC	ENSMUSG00000046157.14	novel	3656	3	NA	NA	-1742	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACCCATCTGTT	NA	False	NA	-1	True	CATAAA	-26	NA	79056143	79008568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79011948_79024534_79024716_79055935
ES.7917.2	chr12	-	3907	3	FSM	ENSMUSG00000046157.14	ENSMUST00000056660.13	3860	3	-42	-5	21	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGACCCATCTGTT	NA	False	NA	-1	True	CATAAA	-26	NA	79054093	79008568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79011948_79024534_79024716_79053746
ES.7917.4	chr12	-	3793	3	NIC	ENSMUSG00000046157.14	novel	3621	3	NA	NA	80	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	3	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79054321	79008570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79011948_79024534_79024716_79054086
ES.7917.5	chr12	-	4177	4	NNC	ENSMUSG00000046157.14	novel	3860	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.18544972870135	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79054073	79008570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79011948_79015969_79016262_79024534_79024716_79053746
ES.7918.1	chr12	+	6370	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	-376	-3	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_1	29.7351403465424	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTGTTGTGGATAT	5749	False	NA	9	True	AATAAA	-21	NA	79075560	79128426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79075753_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.11	chr12	+	7138	28	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	8	-3	intron_retention	FALSE	canonical	3	125	junction_6	14.6229239202716	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTGTTGTGGATAT	6133	False	NA	9	True	AATAAA	-21	NA	79075944	79128426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.12	chr12	+	3905	23	ISM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	9	6623	9	-5597	5prime_fragment	FALSE	canonical	3	125	junction_6	10.5302594287303	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCAGGACATACACAAG	6134	False	NA	NA	False	AATAAA	-16	NA	79075945	79121806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363
ES.7918.14	chr12	+	6390	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	13	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_27	29.6041916502597	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGTGTGTTGTGGAT	6138	False	NA	7	True	AATAAA	-19	NA	79075949	79128424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125764_79125881_79126211
ES.7918.16	chr12	+	6413	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.1152039984435	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGTGTGTTGTGGAT	6139	False	NA	7	True	AATAAA	-19	NA	79075950	79128424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111219_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117570_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.17	chr12	+	1952	7	ISM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	18	25834	18	5515	5prime_fragment	FALSE	canonical	3	125	junction_6	11.6249253283145	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACACTTTATTTATTT	6143	False	NA	NA	False	NA	NA	NA	79075954	79102595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433
ES.7918.18	chr12	+	583	3	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	22	-9184	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	77.5	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACGATAAGGTCTTCT	6147	False	NA	NA	False	NA	NA	NA	79075958	79087896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79087720
ES.7918.2	chr12	+	3415	1	Genic_Genomic	ENSMUSG00000060716.8	novel	NA	NA	NA	NA	-272	-18001	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATGTGGGGATGCCAG	5853	False	NA	NA	False	NA	NA	NA	79075664	79079079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_79075700_79079100
ES.7918.21	chr12	+	4565	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	25	-814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	30.513024151289	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGACTCTGGATGCTA	6150	False	NA	NA	False	NA	NA	NA	79075961	79126589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117570_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.22	chr12	+	6315	30	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	38	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.1567446998477	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGTGTGTTGTGGAT	6163	False	NA	7	True	AATAAA	-19	NA	79075974	79128424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79101934_79102014_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.26	chr12	+	5451	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	40	948	40	78	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCAGTTTTATTATTTT	6165	False	NA	NA	False	TATAAA	-24	NA	79075976	79127481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.27	chr12	+	6291	28	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	41	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_22	31.0789957696855	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACTGTGTGTTGTGGA	6166	False	NA	6	True	AATAAA	-18	NA	79075977	79128423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.28	chr12	+	6374	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	30.6505984227628	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATAACTGTGTGTTGT	6166	False	NA	3	True	AATAAA	-15	NA	79075977	79128420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115887_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.29	chr12	+	6357	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	49	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_15	30.0368820904282	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAACTGTGTGTTGTGGA	6174	False	NA	6	True	AATAAA	-18	NA	79075985	79128423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115172_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.3	chr12	+	6638	29	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	-214	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	30.6855970668152	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATAACTGTGTGTTGT	5911	False	NA	3	True	AATAAA	-15	NA	79075722	79128420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100375_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.30	chr12	+	2691	2	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	68	-18019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	6193	False	NA	NA	False	NA	NA	NA	79076004	79079061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076195_79076560
ES.7918.33	chr12	+	6341	29	NNC	ENSMUSG00000060716.8	novel	430	4	NA	NA	-16	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	39.5559536528669	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATAACTGTGTGTTGTG	6640	False	NA	4	True	AATAAA	-16	NA	79076451	79128421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79076623_79087265_79087437_79095965_79096029_79097039_79097190_79100372_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.34	chr12	+	6233	29	FSM	ENSMUSG00000060716.8	ENSMUST00000219956.2	5229	29	14	-1018	14	-1	multi-exon	FALSE	canonical	1	7	junction_1	29.4101884331514	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATAACTGTGTGTTGTG	NA	False	NA	4	True	AATAAA	-16	NA	79082423	79128421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79082484_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.35	chr12	+	6182	28	ISM	ENSMUSG00000060716.8	ENSMUST00000219956.2	5229	29	4846	-1017	4846	-2	3prime_fragment	FALSE	canonical	3	125	junction_5	14.5509841091918	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATAACTGTGTGTTGT	NA	False	NA	3	True	AATAAA	-15	NA	79087255	79128420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.37	chr12	+	6109	28	NNC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	5009	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.0189109980697	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATAACTGTGTGTTGTGG	NA	False	NA	5	True	AATAAA	-17	NA	79087418	79128422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110804_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.39	chr12	+	5054	16	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	-962	-1	intron_retention	FALSE	canonical	3	139	junction_10	14.0958622770419	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATAACTGTGTGTTGTG	NA	False	NA	4	True	AATAAA	-16	NA	79113420	79128421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.4	chr12	+	6558	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	-122	3	-122	-3	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTGTTGTGGATAT	6003	False	NA	9	True	AATAAA	-21	NA	79075814	79128426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.5	chr12	+	4915	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	-101	1625	-101	-599	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAATGCCTACAAATCTC	6024	False	NA	NA	False	AATAAA	-35	NA	79075835	79126804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.7	chr12	+	4611	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	-10	1838	-10	-812	multi-exon	FALSE	canonical	3	125	junction_6	14.4205688557161	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTCTGGATGCTACC	6115	False	NA	NA	False	NA	NA	NA	79075926	79126591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ES.7918.8	chr12	+	6188	2	ISM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	-9	35243	-9	-3894	5prime_fragment	FALSE	canonical	3	156	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGCATTAATTAGATTC	6116	False	NA	NA	False	NA	NA	NA	79075927	79093186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_79076195_79087265
ES.7919.1	chr12	-	4798	2	NNC	ENSMUSG00000021120.12	novel	2868	3	NA	NA	3585	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGACTTGTTTTTT	1702	False	NA	-4	True	AATAAA	-27	NA	79132834	79127440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79130474_79131069
ES.7919.2	chr12	-	2392	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	-58	5	-58	-5	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTATGGACTTGTTTT	NA	False	NA	-6	True	AATAAA	-25	NA	79136483	79127442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ES.7919.3	chr12	-	2412	5	NNC	ENSMUSG00000021120.12	novel	2339	4	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.7741721457397	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAAGTATGGACTTG	NA	False	NA	-10	True	AATAAA	-45	NA	79136416	79127446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79129271_79130389_79130474_79131069_79131161_79132420_79132631_79136213
ES.7919.5	chr12	-	2452	4	NNC	ENSMUSG00000021120.12	novel	2339	4	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.5615302705982	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAAGTATGGACTTG	NA	False	NA	-10	True	AATAAA	-45	NA	79136406	79127446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79129271_79130389_79130474_79132420_79132772_79136213
ES.7919.6	chr12	-	1134	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	24	1181	18	-597	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACCCAGCTCCTAAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	79136401	79128618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ES.7919.7	chr12	-	1183	3	NNC	ENSMUSG00000021120.12	novel	2868	3	NA	NA	1	-1685	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	61.5	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTTATTTCATAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	79136422	79129706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79130471_79132420_79132631_79136213
ES.7919.9	chr12	-	955	3	NNC	ENSMUSG00000021120.12	novel	2868	3	NA	NA	1	-1784	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCCTATCCTGTGGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	79136422	79129805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79130486_79132564_79132631_79136213
ES.792.1	chr1	+	1637	1	Antisense	novelGene_ENSMUSG00000096094.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAATGTGTGTTTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	75207967	75209604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_75208000_75209600
ES.7920.1	chr12	-	3728	1	Intergenic	novelGene_6539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAAGTTCTGTGACTCT	2158	False	NA	NA	False	NA	NA	NA	79173731	79170003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79170000_79173700
ES.7921.1	chr12	-	3537	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	221	-2268	2	2268	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTTGTGAGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	79219220	79200522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ES.7921.10	chr12	-	992	7	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	269	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	332.388828532689	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTGTTTATGACT	NA	False	NA	-32	True	NA	NA	NA	79218953	79203059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218391_79218526_79218868
ES.7921.11	chr12	-	5289	4	NIC	ENSMUSG00000021124.14	novel	1059	5	NA	NA	19	43	intron_retention	FALSE	canonical	3	23	junction_3	337.845461055133	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTGTTTATGACT	NA	False	NA	-32	True	NA	NA	NA	79219203	79203059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79203346_79204621_79204684_79207182_79211914_79218993
ES.7921.12	chr12	-	1246	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	-25	269	-25	43	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTGTTTATGACT	NA	False	NA	-32	True	NA	NA	NA	79219466	79203059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ES.7921.13	chr12	-	1018	1	Intergenic	novelGene_6540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79208802	79207784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79207800_79208800
ES.7921.14	chr12	-	1389	1	NIC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	58	-14704	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79219383	79217994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79218000_79219400
ES.7921.2	chr12	-	1349	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	-24	165	-24	-12	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAGAGAAGGGAGTTT	NA	False	NA	72	True	AATACA	-24	NA	79219465	79202955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ES.7921.4	chr12	-	1139	7	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	7	74	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	332.795566209781	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTATAACATTAATAGC	NA	False	NA	-1	True	AATAAA	-26	NA	79219215	79203028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79214085_79214199_79218993
ES.7921.5	chr12	-	1318	7	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	11	68	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_5	321.69641485931	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTACATGTATAACATT	NA	False	NA	-7	True	AATAAA	-20	NA	79219430	79203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218391_79218475_79218993
ES.7921.6	chr12	-	1067	7	NNC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	9	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	334.836278400853	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTACATGTATAACATT	NA	False	NA	-7	True	AATAAA	-20	NA	79219213	79203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79203346_79204621_79204684_79207182_79207357_79209628_79209678_79211721_79211914_79213124_79213184_79218993
ES.7921.7	chr12	-	976	5	FSM	ENSMUSG00000021124.14	ENSMUST00000162789.9	1059	5	-8	91	-8	68	multi-exon	FALSE	canonical	3	23	junction_4	311.173183291877	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTACATGTATAACATT	NA	False	NA	-7	True	AATAAA	-20	NA	79219230	79203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79218993
ES.7921.8	chr12	-	5590	5	NIC	ENSMUSG00000021124.14	novel	1490	6	NA	NA	21	68	intron_retention	FALSE	canonical	3	652	junction_3	37.9300342736465	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTACATGTATAACATT	NA	False	NA	-7	True	AATAAA	-20	NA	79219420	79203034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79203346_79204621_79204684_79207182_79211914_79213124_79213184_79218993
ES.7922.1	chr12	-	2960	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	406	-104	-94	104	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCTTGTTTTTAATTC	NA	False	NA	86	True	AATGAA	-17	NA	79238661	79221006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ES.7922.2	chr12	-	3026	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	238	-2	238	2	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGGGGATATTGGAAA	NA	False	NA	-16	True	AATAAA	-42	NA	79238829	79221108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ES.7922.3	chr12	-	2730	6	FSM	ENSMUSG00000066441.15	ENSMUST00000159500.2	815	6	-86	-1829	-86	1	multi-exon	FALSE	canonical	0	0	junction_5	48.318112545918	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTATGGGGATATTGGAA	NA	False	NA	-17	True	AATAAA	-41	NA	79238653	79221109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79238499
ES.7922.5	chr12	-	6857	1	NIC	ENSMUSG00000066441.15	novel	3262	7	NA	NA	9763	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTTTATGGGGATA	NA	False	NA	-23	True	AATAAA	-35	NA	79227972	79221115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79221100_79228000
ES.7922.6	chr12	-	1607	7	NNC	ENSMUSG00000066441.15	novel	3262	7	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	44.4425346811913	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCTGTTTCTCAGCCTA	NA	False	NA	-3	True	AATAAA	-18	NA	79238627	79222324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235763_79235882_79238499
ES.7923.1	chr12	+	1676	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	-2	4	-2	-3	multi-exon	FALSE	canonical	2	3	junction_5	2.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGCCTGGTGTCTTTTC	373	False	NA	NA	False	AATAAA	-15	NA	79255685	79269435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
ES.7924.1	chr12	-	206	1	Intergenic	novelGene_6541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTACAAGCTTTATG	NA	False	NA	NA	False	NA	NA	NA	79277838	79277632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79277600_79277800
ES.7925.1	chr12	+	2584	11	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCACAC	5055	False	NA	NA	False	AATACA	-16	NA	79308382	79322040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79308601_79310548_79310726_79311085_79311207_79312460_79312567_79313131_79313329_79315132_79315874_79317609_79317718_79318843_79319062_79320068_79320234_79320332_79320449_79321623
ES.7925.2	chr12	+	2581	11	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCACAC	5055	False	NA	NA	False	AATACA	-16	NA	79308382	79322040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79308594_79310544_79310726_79311085_79311207_79312460_79312567_79313131_79313329_79315132_79315874_79317609_79317718_79318843_79319062_79320068_79320234_79320332_79320449_79321623
ES.7925.3	chr12	+	3163	10	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACACTAGACAACATTACT	5055	False	NA	NA	False	AATACA	-30	NA	79308382	79322054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79308601_79310548_79310726_79311085_79311207_79312460_79313329_79315132_79315874_79317609_79317718_79318843_79319062_79320068_79320234_79320332_79320449_79321623
ES.7925.4	chr12	+	1876	2	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGCACAC	NA	False	NA	NA	False	AATACA	-16	NA	79318989	79322040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79320449_79321623
ES.7925.5	chr12	+	3063	1	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACACTAGACAACATTACT	NA	False	NA	NA	False	AATACA	-30	NA	79318991	79322054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79319000_79322100
ES.7926.1	chr12	+	176	1	Intergenic	novelGene_6542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGCACTGAAA	NA	False	NA	NA	False	NA	NA	NA	79322223	79322399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79322200_79322400
ES.7927.1	chr12	+	2435	1	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACCAAAAAAACCC	6343	False	NA	NA	False	NA	NA	NA	79333587	79336022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_79333600_79336000
ES.7927.2	chr12	+	183	1	Intergenic	novelGene_6543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	8014	False	NA	NA	False	NA	NA	NA	79335258	79335441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79335300_79335400
ES.7928.1	chr12	-	4126	1	FSM	ENSMUSG00000066440.6	ENSMUST00000218447.2	499	1	203	-3830	203	1	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTAGCTTCATCAGCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	79283244	79279118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79279100_79283200
ES.7928.10	chr12	-	9503	41	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	13.4591743803251	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79343049	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79308092_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325305_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.11	chr12	-	5809	24	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-3710	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.8593913834765	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79318897	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285890_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79292988_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840
ES.7928.12	chr12	-	9433	43	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	13.217867382471	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79343051	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79315984_79316055_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.16	chr12	-	4119	16	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	15.2248335148715	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCTTAGCTTCATCAGC	NA	False	NA	-7	True	AATAAA	-15	NA	79308452	79279121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298098_79302003_79302141_79304188_79304353_79307574_79307674_79308351
ES.7928.17	chr12	-	9371	42	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_24	11.9161256774181	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTCTTAGCTTCATCAG	NA	False	NA	-8	True	AATAAA	-14	NA	79343055	79279122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320060_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.18	chr12	-	9373	42	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	13.2575279143946	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTCTTAGCTTCATCAG	NA	False	NA	-8	True	AATAAA	-14	NA	79343063	79279122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298059_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320060_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.19	chr12	-	9292	41	NIC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	12.0689425800275	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGTCTTAGCTTCATCAG	NA	False	NA	-8	True	AATAAA	-14	NA	79343051	79279122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.2	chr12	-	9382	42	FSM	ENSMUSG00000066440.6	ENSMUST00000021547.8	9391	42	9	0	6	0	multi-exon	TRUE	canonical	3	23	junction_36	10.4802014412253	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTAGCTTCATCAGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	79343069	79279119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.20	chr12	-	2252	3	FSM	ENSMUSG00000066440.6	ENSMUST00000219571.2	824	3	-18	-1410	5	27	multi-exon	FALSE	canonical	3	37	junction_2	9.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAGAGAATACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79343070	79338793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79340679_79342250_79342547_79342999
ES.7928.21	chr12	-	4262	1	FSM	ENSMUSG00000066440.6	ENSMUST00000218510.2	4255	1	20	-27	1	27	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAGAGAATACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	79343055	79338793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_79338800_79343100
ES.7928.3	chr12	-	5609	21	NIC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-8	0	intron_retention	FALSE	canonical	3	28	junction_15	8.9977775033616	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTAGCTTCATCAGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	79315195	79279119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132
ES.7928.5	chr12	-	9325	43	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	11.9663407379865	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79343056	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79292836_79292878_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.6	chr12	-	4348	18	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	-2258	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	17.0413703820517	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79310623	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297734_79297878_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546
ES.7928.8	chr12	-	9390	42	NNC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	12.1054262394116	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	NA	False	NA	-6	True	AATAAA	-16	NA	79343030	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291313_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ES.7928.9	chr12	-	3584	7	NIC	ENSMUSG00000066440.6	novel	9391	42	NA	NA	18	-1	intron_retention	FALSE	canonical	3	37	junction_6	9.94568583189046	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTAGCTTCATCAGCT	5121	False	NA	-6	True	AATAAA	-16	NA	79291167	79279120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79286831_79287669_79287868_79291045
ES.7929.1	chr12	+	3813	3	NIC	ENSMUSG00000059060.16	novel	2187	11	NA	NA	-30	-204953	intron_retention	FALSE	canonical	3	54	junction_1	13	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATAAATTATCTCATGAAA	8683	False	NA	NA	False	NA	NA	NA	79344094	79350477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_79347422_79349249_79349364_79350105
ES.7929.2	chr12	+	3066	9	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	1	-16472	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	29.6647939483827	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGGTCTGCTTTGGGG	8714	False	NA	NA	False	ATTAAA	-21	NA	79344125	79538958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79344197_79345186_79345297_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79536851
ES.7929.3	chr12	+	986	8	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	10	-36869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	23.9991496447993	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCATGTTTCCTTCTT	8723	False	NA	NA	False	AGTAAA	-19	NA	79344134	79518561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79518376
ES.7929.4	chr12	+	3731	1	Intergenic	novelGene_6545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTGGGTGATTGCCT	NA	False	NA	NA	False	NA	NA	NA	79376122	79379853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79376100_79379900
ES.7929.5	chr12	+	1442	1	Intergenic	novelGene_6547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	TATAAA	-3	NA	79458055	79459497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79458100_79459500
ES.7929.6	chr12	+	3726	2	Intergenic	novelGene_6548	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAACCATCTTCTTGA	469	False	NA	NA	False	NA	NA	NA	79482471	79486249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79482817_79482868
ES.7929.7	chr12	+	5229	1	Intergenic	novelGene_6549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79521883	79527112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79521900_79527100
ES.7929.8	chr12	+	2323	1	Intergenic	novelGene_6550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	79524660	79526983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79524700_79527000
ES.793.1	chr1	-	172	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCTTTATTAAA	11	True	NA	NA	False	NA	NA	NA	75209441	75209269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75209300_75209400
ES.7930.1	chr12	-	171	1	Intergenic	novelGene_6544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAGTGCTGA	NA	False	NA	NA	False	NA	NA	NA	79373143	79372972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79373000_79373100
ES.7931.1	chr12	-	1079	1	Intergenic	novelGene_6546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79442425	79441346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79441300_79442400
ES.7932.1	chr12	-	3534	1	Intergenic	novelGene_6551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAATATAATATG	NA	False	NA	NA	False	NA	NA	NA	79534914	79531380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79531400_79534900
ES.7933.1	chr12	-	172	1	Intergenic	novelGene_6552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAAGCCCGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	79547869	79547697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79547700_79547900
ES.7934.1	chr12	-	4742	1	Intergenic	novelGene_6553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGGAGTGCTCTTACA	NA	False	NA	NA	False	NA	NA	NA	79577777	79573035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79573000_79577800
ES.7935.1	chr12	-	156	1	Intergenic	novelGene_6554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGTAAATAAATCTTAAA	4156	False	NA	NA	False	NA	NA	NA	79642490	79642334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79642300_79642500
ES.7936.1	chr12	-	198	1	Intergenic	novelGene_6555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAGATACCATTCAG	4480	False	NA	NA	False	NA	NA	NA	79687684	79687486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79687500_79687700
ES.7937.1	chr12	+	1720	1	Intergenic	novelGene_6556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGCTCCTCCTTGACC	NA	False	NA	NA	False	NA	NA	NA	79711608	79713328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79711600_79713300
ES.7938.1	chr12	+	216	1	Intergenic	novelGene_6557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGAGCCTATGCTTGA	3235	False	NA	NA	False	NA	NA	NA	79765615	79765831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79765600_79765800
ES.7939.1	chr12	+	566	3	ISM	ENSMUSG00000059060.16	ENSMUST00000218039.3	2187	11	469556	6	439766	-6	3prime_fragment	FALSE	canonical	3	26	junction_2	14.5	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACCGGGGTCTCCAAA	NA	False	NA	1	True	AATAAA	-34	NA	79813892	79861146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_79813949_79849963_79850043_79860715
ES.7939.2	chr12	+	2287	1	Intergenic	novelGene_6558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-28	NA	79828703	79830990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79828700_79831000
ES.7939.3	chr12	+	4333	1	Intergenic	novelGene_6559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79850442	79854775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_79850400_79854800
ES.7939.4	chr12	+	3921	1	NIC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	483099	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACCGGGGTCTCCAAA	NA	False	NA	1	True	AATAAA	-34	NA	79857225	79861146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_79857200_79861100
ES.7939.5	chr12	+	1729	1	Genic_Genomic	ENSMUSG00000059060.16	novel	NA	NA	NA	NA	486643	1034	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTCCTCTCAATAAAT	NA	False	NA	NA	False	AATAAA	-11	NA	79860769	79862498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_79860800_79862500
ES.794.1	chr1	+	1924	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	-62	-7	19	5	multi-exon	FALSE	canonical	3	30	junction_9	6.24400947476761	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGTGTTCCTCCTTTC	2197	False	NA	11	True	AATAAA	-21	NA	75213068	75222341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ES.794.10	chr1	+	2012	11	NIC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	15.1396829557293	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2258	False	NA	4	True	AATAAA	-14	NA	75213129	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221078_75221235_75221437
ES.794.11	chr1	+	2883	10	NIC	ENSMUSG00000026203.17	novel	1366	10	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_3	15.2153269054433	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	2330	False	NA	2	True	AATAAA	-12	NA	75213201	75222332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215751_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75221235_75221437
ES.794.12	chr1	+	3679	10	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	14.5661539023235	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	2331	False	NA	2	True	AATAAA	-12	NA	75213202	75222332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75219240_75219319_75220306_75221437
ES.794.13	chr1	+	2044	9	FSM	ENSMUSG00000026203.17	ENSMUST00000082158.13	1253	9	95	-886	4	0	multi-exon	FALSE	canonical	3	30	junction_8	6.09815545882523	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2332	False	NA	4	True	AATAAA	-14	NA	75213203	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ES.794.14	chr1	+	4419	9	NIC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	15	junction_8	10	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2339	False	NA	4	True	AATAAA	-14	NA	75213210	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75213234_75213495_75213593_75214098_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75221235_75221437
ES.794.2	chr1	+	3034	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	36	-4	-23	0	multi-exon	FALSE	canonical	3	35	junction_1	4.89738450603993	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2214	False	NA	6	True	AATAAA	-16	NA	75213085	75222336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ES.794.3	chr1	+	3098	8	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-23	0	intron_retention	FALSE	non_canonical	0	0	junction_7	15.5366584277972	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2214	False	NA	6	True	AATAAA	-16	NA	75213085	75222336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75213234_75213495_75213593_75214098_75215978_75216151_75216275_75217535_75217918_75218052_75218124_75220101_75220306_75222142
ES.794.4	chr1	+	1245	11	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-18	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.6144515407521	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCCTGTGTTCCTCCTT	2219	False	NA	9	True	AATAAA	-19	NA	75213090	75222339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221206_75221235_75222120
ES.794.5	chr1	+	3826	2	NNC	ENSMUSG00000026203.17	novel	737	2	NA	NA	-18	-376	intron_retention	FALSE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTTAAAAAATGTGTAAG	2219	False	NA	NA	False	NA	NA	NA	75213090	75217189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75214831_75215103
ES.794.6	chr1	+	2080	9	NIC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	30	junction_8	6.6226410894748	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2220	False	NA	4	True	AATAAA	-14	NA	75213091	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217918_75218052_75218124_75220101_75220306_75221437
ES.794.7	chr1	+	2822	10	NIC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-16	0	intron_retention	FALSE	canonical	3	15	junction_9	10.0418875801733	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2221	False	NA	4	True	AATAAA	-14	NA	75213092	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75221235_75221437
ES.794.8	chr1	+	300	3	ISM	ENSMUSG00000026203.17	ENSMUST00000185403.7	1366	10	-64	7539	-16	-8	5prime_fragment	FALSE	canonical	3	35	junction_1	2.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTAAGGAGGTG	2221	False	NA	NA	False	AATAAA	-11	NA	75213092	75214160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75213234_75213495_75213593_75214098
ES.794.9	chr1	+	1917	11	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	13.7873130087048	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2225	False	NA	4	True	AATAAA	-14	NA	75213096	75222334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221206_75221235_75221437
ES.7940.1	chr12	-	5143	5	Antisense	novelGene_ENSMUSG00000059060.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATTTCTAGGATGCTC	NA	False	NA	NA	False	AATAAA	-19	NA	79854587	79831768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_79836364_79838207_79838351_79839576_79839773_79840773_79840832_79854436
ES.7940.2	chr12	-	4970	4	Antisense	novelGene_ENSMUSG00000059060.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGATTTCTAGGAT	NA	False	NA	NA	False	AATAAA	-15	NA	79854561	79831772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_79836364_79839576_79839773_79840773_79840832_79854436
ES.7941.1	chr12	-	2879	1	Intergenic	novelGene_6560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACAAAACTGAGCA	NA	False	NA	NA	False	NA	NA	NA	79858994	79856115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_79856100_79859000
ES.7942.1	chr12	+	2252	2	Intergenic	novelGene_6561	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80057320	80062765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80057457_80060649
ES.7943.1	chr12	-	674	4	NNC	ENSMUSG00000111933.2	novel	3871	2	NA	NA	-2676	-50641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAACAAAACAA	8454	False	NA	NA	False	NA	NA	NA	80130884	80115829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80116222_80119283_80119408_80127877_80127988_80130836
ES.7944.1	chr12	-	3305	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	-313	-2	-313	2	multi-exon	FALSE	canonical	3	257	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTATAGGTTTTTCC	8854	False	NA	94	True	AATAAA	-20	NA	80160100	80154525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80157323_80159592
ES.7944.2	chr12	-	3214	1	NIC	ENSMUSG00000021127.8	novel	2990	2	NA	NA	2027	0	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	NA	False	NA	92	True	AATAAA	-18	NA	80157741	80154527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80154500_80157700
ES.7944.3	chr12	-	2255	2	NNC	ENSMUSG00000021127.8	novel	2990	2	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAATGATTTGTCTATA	9167	False	NA	85	True	AATAAA	-11	NA	80159787	80154534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80156667_80159664
ES.7945.1	chr12	-	176	1	Intergenic	novelGene_6562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	8853	False	NA	NA	False	NA	NA	NA	80173121	80172945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80172900_80173100
ES.7946.1	chr12	+	175	1	Intergenic	novelGene_6563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	80196607	80196782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80196600_80196800
ES.7947.1	chr12	-	3760	22	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	7	13634	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	71.2475802190841	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATACAGGAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	80307138	80200686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80200730_80214315_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.10	chr12	-	4879	20	NIC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	10	4	intron_retention	FALSE	canonical	3	172	junction_2	33.4761667401181	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGTTCCTTTGGC	NA	False	NA	-1	True	ATTAAA	-20	NA	80307135	80214316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.12	chr12	-	4297	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	71.6655251847079	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGTTCCTTTGGC	NA	False	NA	-1	True	ATTAAA	-20	NA	80307157	80214316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80218088_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.13	chr12	-	5956	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	35155	4	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	72.067659182188	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGTTCCTTTGGC	NA	False	NA	-1	True	ATTAAA	-20	NA	80270403	80214316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.16	chr12	-	3864	22	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	92.9552595182696	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGCTTGTTCCTTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	80307160	80214318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80276224_80276338_80306760
ES.7947.17	chr12	-	3467	21	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-36309	2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	69.1917625154902	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGCTTGTTCCTTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	80267931	80214318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.18	chr12	-	3534	21	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.9954859696078	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGCTTGTTCCTTTG	NA	False	NA	-3	True	ATTAAA	-18	NA	80306910	80214318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219965_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.19	chr12	-	3546	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-25178	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	75.1787702745928	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTTTGCTTGTTCCTTT	3731	False	NA	-4	True	ATTAAA	-17	NA	80256800	80214319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80256604
ES.7947.2	chr12	-	168	1	Intergenic	novelGene_6564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGCAGGGCCAACCGGA	NA	False	NA	NA	False	NA	NA	NA	80211064	80210896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80210900_80211100
ES.7947.20	chr12	-	3398	20	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-36309	-1	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	87.9800090614898	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACTTTGCTTGTTCCT	NA	False	NA	-6	True	ATTAAA	-15	NA	80267931	80214321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.22	chr12	-	3991	25	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	32267	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	119.049002224108	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACTTTGCTTGTTCCT	NA	False	NA	-6	True	ATTAAA	-15	NA	80273291	80214321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80270233_80270379_80271808_80272104_80272889_80272966_80273230
ES.7947.23	chr12	-	3791	22	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	8	-1	combination_of_known_splicesites	FALSE	canonical	2	16	junction_3	69.1090039124332	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACTTTGCTTGTTCCT	NA	False	NA	-6	True	ATTAAA	-15	NA	80307137	80214321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.27	chr12	-	3392	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-25276	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	75.7046233726845	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTACTTTGCTTGTTC	3633	False	NA	-8	True	ATTAAA	-13	NA	80256898	80214323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80256852
ES.7947.28	chr12	-	3705	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	75.7127961443771	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGACATTACTTTGCTTGT	NA	False	NA	-10	True	ATTAAA	-11	NA	80307135	80214325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245828_80251735_80251856_80256132_80256248_80306760
ES.7947.3	chr12	-	5840	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-18	-2088	-18	2088	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTGTTTGACTAACTGA	NA	False	NA	NA	False	NA	NA	NA	80307163	80212232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.30	chr12	-	3594	20	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	10	-49	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	66.6380640396115	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGATGTTGCTTGGCA	NA	False	NA	-7	True	ATTAAA	-18	NA	80307135	80214369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80215791_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.31	chr12	-	4167	19	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-15	-50	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	69.904277585076	442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATGATGTTGCTTGGC	NA	False	NA	-8	True	ATTAAA	-17	NA	80307160	80214370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215060_80217599_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.32	chr12	-	3724	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-156	166	-156	-166	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTTCTCATTTTTC	NA	False	NA	2	True	ATTAAA	-39	NA	80307301	80214486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.33	chr12	-	3620	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-347	-609	-67	-166	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTTCTCATTTTTC	NA	False	NA	2	True	ATTAAA	-39	NA	80307212	80214486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.34	chr12	-	4091	21	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-25	-171	combination_of_known_junctions	FALSE	canonical	3	162	junction_3	40.8600966714471	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAATTCATGGCTTCTCAT	NA	False	NA	-3	True	ATTAAA	-34	NA	80307170	80214491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80215791_80216956_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.36	chr12	-	6209	19	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-21	-177	intron_retention	FALSE	canonical	3	254	junction_8	20.3059925473574	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATAATTCATGGCT	NA	False	NA	-9	True	ATTAAA	-28	NA	80307166	80214497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.37	chr12	-	3288	21	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-36309	-177	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	69.1917625154902	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGATAATTCATGGCT	NA	False	NA	-9	True	ATTAAA	-28	NA	80267931	80214497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.38	chr12	-	3295	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-36309	-185	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	72.067659182188	437	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTCAAAGAAGATAAT	NA	False	NA	-17	True	ATTAAA	-20	NA	80267931	80214505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.4	chr12	-	3762	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-317	-781	-37	6	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGTTCCTTTGGCTG	NA	False	NA	1	True	ATTAAA	-22	NA	80307182	80214314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.40	chr12	-	4165	18	NIC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-20198	-185	intron_retention	FALSE	canonical	3	172	junction_2	34.9875904841884	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTCAAAGAAGATAAT	8711	False	NA	-17	True	ATTAAA	-20	NA	80251820	80214505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735
ES.7947.44	chr12	-	3135	19	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-61	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	78.9451286231984	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGCTTTTCAAAGAAGA	NA	False	NA	-21	True	ATTAAA	-16	NA	80306926	80214509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243804_80256132_80256248_80306760
ES.7947.45	chr12	-	3488	22	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-19	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.8915673052133	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGCTTTTCAAAGAAGA	NA	False	NA	-21	True	ATTAAA	-16	NA	80307164	80214509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215013_80215088_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.46	chr12	-	4555	21	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-55	-189	intron_retention	FALSE	canonical	0	0	junction_12	91.1648369712797	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGCTTTTCAAAGAAGA	NA	False	NA	-21	True	ATTAAA	-16	NA	80306920	80214509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80238059_80238144_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.47	chr12	-	3593	22	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	18	-189	combination_of_known_splicesites	FALSE	canonical	2	16	junction_3	69.1090039124332	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGCTTTTCAAAGAAGA	NA	False	NA	-21	True	ATTAAA	-16	NA	80307127	80214509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.48	chr12	-	6204	20	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	53	-192	intron_retention	FALSE	canonical	0	0	junction_11	91.4017038579919	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCTGCTTTTCAAAGA	NA	False	NA	-24	True	ATTAAA	-13	NA	80307092	80214512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80238059_80238144_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.49	chr12	-	3388	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-292	-432	-12	213	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTCTGTCTGCTGTATT	NA	False	NA	NA	False	NA	NA	NA	80307157	80214663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.5	chr12	-	5636	6	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-5145	6	intron_retention	FALSE	canonical	3	276	junction_5	17.6793665044877	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGTTCCTTTGGCTG	7422	False	NA	1	True	ATTAAA	-22	NA	80224063	80214314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80218650_80219736_80220989_80221233_80221417_80222929_80223071_80223961
ES.7947.50	chr12	-	3378	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-16	372	-16	184	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTTTACTGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	80307161	80214692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.51	chr12	-	3265	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-270	-331	10	112	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAACTATTTGCACC	NA	False	NA	NA	False	TATAAA	-45	NA	80307135	80214764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.52	chr12	-	5854	19	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	8	53	intron_retention	FALSE	canonical	3	254	junction_8	20.3059925473574	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTTTATTATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80307137	80214823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.53	chr12	-	3221	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	6	507	6	49	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACATATTTTATTATAAAA	NA	False	NA	NA	False	NA	NA	NA	80307139	80214827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.54	chr12	-	3297	22	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-15	38	combination_of_known_splicesites	FALSE	canonical	2	16	junction_3	69.1090039124332	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAAACTACATATT	NA	False	NA	NA	False	NA	NA	NA	80307160	80214838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.55	chr12	-	2869	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	-36254	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	72.067659182188	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACGTTAAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	80267876	80214876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.56	chr12	-	2868	21	NNC	ENSMUSG00000015143.16	novel	2664	21	NA	NA	-36287	-19	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_20	69.1917625154902	424	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGATAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80267909	80214895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80267800
ES.7947.57	chr12	-	3783	19	ISM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	26	1971	26	-1153	5prime_fragment	FALSE	canonical	3	162	junction_1	35.9806618156387	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCGTACTTGTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	80307119	80216291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.58	chr12	-	1617	10	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	-270	14810	10	85	5prime_fragment	FALSE	canonical	3	263	junction_7	16.478942792411	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAACTGTAATGTTAAT	NA	False	NA	NA	False	AAAAAG	-28	NA	80307135	80229905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.59	chr12	-	3844	1	Intergenic	novelGene_6565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	375	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCCAACCAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80236284	80232440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80232400_80236300
ES.7947.6	chr12	-	4216	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	-477	-5	-477	5	multi-exon	FALSE	canonical	3	154	junction_2	44.8659113358906	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTGTTCCTTTGGCT	NA	False	NA	0	True	ATTAAA	-21	NA	80307622	80214315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ES.7947.60	chr12	-	4181	1	Genic_Genomic	ENSMUSG00000015143.16	novel	NA	NA	NA	NA	-20	-59262	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80307165	80302984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_80303000_80307200
ES.7947.61	chr12	-	4012	1	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	10	-59401	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGCCTGAGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	80307135	80303123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80303100_80307100
ES.7947.9	chr12	-	3617	21	NNC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	35061	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	75.7046233726845	438	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTGTTCCTTTGGC	NA	False	NA	-1	True	ATTAAA	-20	NA	80270497	80214316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80270233
ES.7948.1	chr12	+	195	1	Intergenic	novelGene_6566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACTGATTCAGTACT	NA	False	NA	NA	False	NA	NA	NA	80311818	80312013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80311800_80312000
ES.7949.1	chr12	-	180	1	Intergenic	novelGene_6567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTTGGTTCAGTTCT	NA	False	NA	NA	False	NA	NA	NA	80320785	80320605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80320600_80320800
ES.795.1	chr1	-	186	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAATAGAGAAGAC	787	False	NA	NA	False	NA	NA	NA	75219129	75218943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75218900_75219100
ES.7950.1	chr12	-	155	1	Intergenic	novelGene_6568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80375124	80374969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80375000_80375100
ES.7951.1	chr12	+	176	1	Intergenic	novelGene_6569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATATTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	80392670	80392846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80392700_80392800
ES.7952.1	chr12	+	4341	1	Antisense	novelGene_ENSMUSG00000049106.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTTGC	NA	False	NA	NA	False	NA	NA	NA	80445625	80449966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_80445600_80450000
ES.7953.1	chr12	+	640	2	Genic_Genomic	ENSMUSG00000112278.2	novel	728	1	NA	NA	-90	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCTTTTTTTA	1613	False	NA	NA	False	ATTAAA	-11	NA	80481892	80482707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_80482083_80482257
ES.7954.1	chr12	-	5681	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	25	0	25	0	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCTTCCTCCTCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	80483350	80382621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ES.7954.10	chr12	-	177	1	Intergenic	novelGene_6570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	80419830	80419653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80419700_80419800
ES.7954.2	chr12	-	5319	9	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	50	-2	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	11.9993489406717	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGCCTTCCTCCTCT	NA	False	NA	-4	True	AATAAA	-14	NA	80483169	80382623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80483137
ES.7954.3	chr12	-	4893	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	-10	823	-10	-823	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGTGTCTCTCTTCC	NA	False	NA	NA	False	ATTAAA	-45	NA	80483385	80383444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ES.7954.4	chr12	-	4379	8	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	14	-834	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	13.0243100800474	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAACCCCTCAGTGTGT	NA	False	NA	NA	False	ATTAAA	-34	NA	80483205	80383455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80483137
ES.7954.5	chr12	-	4722	10	NNC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	-73	-834	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	11.4891252930761	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAACCCCTCAGTGTGT	NA	False	NA	NA	False	ATTAAA	-34	NA	80483292	80383455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958_80483071_80483137
ES.7954.6	chr12	-	4623	9	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	63	-841	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	11.9993489406717	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTATAACCCCTC	NA	False	NA	NA	False	ATTAAA	-27	NA	80483312	80383462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80483137
ES.7954.7	chr12	-	3945	9	NIC	ENSMUSG00000049106.8	novel	5706	9	NA	NA	62	-1520	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	11.9993489406717	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCCAGTGTGTAGTGG	NA	False	NA	NA	False	AAGAAA	-6	NA	80483313	80384141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80483137
ES.7954.8	chr12	-	3171	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	-13	2548	-13	-2548	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTCTGCTGCTGCTC	NA	False	NA	NA	False	ATTAAA	-22	NA	80483388	80385169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ES.7954.9	chr12	-	4738	9	NNC	ENSMUSG00000049106.8	novel	337	4	NA	NA	55	-8763	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	12.5940213990607	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAACTAAATGCAGGAAA	NA	False	NA	NA	False	AAAAAG	-5	NA	80483320	80391384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80392652_80392844_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ES.7955.1	chr12	+	181	1	Intergenic	novelGene_6571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTAGGGGGGCTG	5979	False	NA	NA	False	NA	NA	NA	80486258	80486439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80486300_80486400
ES.7956.1	chr12	-	206	1	Intergenic	novelGene_6572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCTAAAAGAAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	80490145	80489939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80489900_80490100
ES.7957.1	chr12	-	205	1	Intergenic	novelGene_6573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATACTGTCTCTGTGC	NA	False	NA	NA	False	NA	NA	NA	80503445	80503240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80503200_80503400
ES.7958.1	chr12	+	3324	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	-10	-4	-10	4	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTGTAAATGTGAAGC	2653	False	NA	26	True	AATAAA	-23	NA	80509858	80544900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.10	chr12	+	3264	7	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-5	-6	intron_retention	FALSE	canonical	3	4	junction_3	78.9671169256897	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAAGCTCAGTGATTGTA	2783	False	NA	16	True	AATAAA	-13	NA	80509988	80544890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80536175_80536508_80537554_80538005_80539315_80539673_80543554
ES.7958.11	chr12	+	5681	6	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-5	0	intron_retention	FALSE	canonical	2	7	junction_4	85.5602711543155	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2783	False	NA	22	True	AATAAA	-19	NA	80509988	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536249_80539673_80543554
ES.7958.12	chr12	+	5756	6	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-4	2	intron_retention	FALSE	canonical	3	182	junction_4	20.1136769388394	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGATTGTAAATGTGAA	2784	False	NA	24	True	AATAAA	-21	NA	80509989	80544898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80539673_80543554
ES.7958.13	chr12	+	3120	9	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	67.9167689160785	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTAAATGTGAAGCT	2784	False	NA	27	True	AATAAA	-24	NA	80509989	80544901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536249_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.14	chr12	+	2465	3	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	124	15731	-1	1222	5prime_fragment	FALSE	canonical	3	212	junction_2	10.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAGAAAGTGGCATTA	2787	False	NA	NA	False	ATTAAA	-19	NA	80509992	80529165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80510055_80522496_80522963_80527228
ES.7958.15	chr12	+	4741	5	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	124	4892	-1	2045	intron_retention	FALSE	canonical	3	182	junction_4	19.1115148536164	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCGAGATGGCGAGATG	2787	False	NA	NA	False	NA	NA	NA	80509992	80540004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175
ES.7958.16	chr12	+	5294	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	125	-2109	0	4	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTATAGATGGATTCT	2788	False	NA	NA	False	ATTAAA	-19	NA	80509993	80547005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.17	chr12	+	4439	7	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_5	23.1426734266664	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2788	False	NA	22	True	AATAAA	-19	NA	80509993	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80538005_80539315_80539673_80543554
ES.7958.19	chr12	+	4288	7	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	2	-3	intron_retention	FALSE	canonical	0	0	junction_6	76.7103136626505	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCAGTGATTGTAAAT	2790	False	NA	19	True	AATAAA	-16	NA	80509995	80544893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80538005_80539315_80539527_80543554
ES.7958.2	chr12	+	3513	8	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	8	4	intron_retention	FALSE	canonical	3	173	junction_6	22.1018052637871	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTGTAAATGTGAAGC	2671	False	NA	26	True	AATAAA	-23	NA	80509876	80544900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80538005_80539315_80539673_80543554
ES.7958.20	chr12	+	3173	9	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	66.7588945384808	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2799	False	NA	22	True	AATAAA	-19	NA	80510004	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510061_80522503_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.21	chr12	+	1228	3	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	139	16953	14	0	5prime_fragment	FALSE	canonical	3	212	junction_2	10.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATTGGTGTT	2802	False	NA	NA	False	AAGAAA	-17	NA	80510007	80527943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80510055_80522496_80522963_80527228
ES.7958.25	chr12	+	172	1	Intergenic	novelGene_6574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	80517642	80517814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80517600_80517800
ES.7958.26	chr12	+	3125	8	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	12624	3	-361	-3	3prime_fragment	FALSE	canonical	3	165	junction_5	21.3999809269417	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCAGTGATTGTAAAT	3267	False	NA	19	True	AATAAA	-16	NA	80522492	80544893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.27	chr12	+	176	1	Intergenic	novelGene_6576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	5973	False	NA	NA	False	NA	NA	NA	80525198	80525374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80525200_80525400
ES.7958.28	chr12	+	11454	1	FSM	ENSMUSG00000032705.10	ENSMUST00000218565.2	777	1	-7778	-2899	-2560	2045	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCGAGATGGCGAGATG	9325	False	NA	NA	False	NA	NA	NA	80528550	80540004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80528600_80540000
ES.7958.29	chr12	+	3238	2	NNC	ENSMUSG00000032705.10	novel	5245	2	NA	NA	1053	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCAGTGATTGTAAAT	NA	False	NA	19	True	AATAAA	-16	NA	80538927	80544893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80539395_80542122
ES.7958.3	chr12	+	4451	8	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-32	-3	intron_retention	FALSE	canonical	2	7	junction_4	72.5975768415538	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTCAGTGATTGTAAAT	2756	False	NA	19	True	AATAAA	-16	NA	80509961	80544893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536249_80536508_80537554_80537662_80537868_80539673_80543554
ES.7958.30	chr12	+	179	1	Intergenic	novelGene_6577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80543055	80543234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80543100_80543200
ES.7958.5	chr12	+	4397	7	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-32	0	intron_retention	FALSE	canonical	2	7	junction_4	78.1124545482701	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2756	False	NA	22	True	AATAAA	-19	NA	80509961	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536249_80538005_80539315_80539673_80543554
ES.7958.6	chr12	+	3186	9	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.0214252925489	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2756	False	NA	22	True	AATAAA	-19	NA	80509961	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537899_80538005_80539315_80539673_80543554
ES.7958.7	chr12	+	3331	8	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-8	5	intron_retention	FALSE	canonical	2	7	junction_4	72.4760340402542	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTAAATGTGAAGCT	2780	False	NA	27	True	AATAAA	-24	NA	80509985	80544901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536249_80536508_80537554_80538005_80539315_80539673_80543554
ES.7958.8	chr12	+	2987	8	NNC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	74.1628104172138	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGCTCAGTGATTGTAA	2780	False	NA	17	True	AATAAA	-14	NA	80509985	80544891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80510055_80522496_80522963_80527228_80527486_80536249_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7958.9	chr12	+	3319	10	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.0686165873033	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2781	False	NA	22	True	AATAAA	-19	NA	80509986	80544896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80510055_80522496_80522963_80526039_80526167_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ES.7959.1	chr12	+	4013	16	FSM	ENSMUSG00000021130.9	ENSMUST00000219993.2	4222	16	212	-3	212	3	multi-exon	FALSE	canonical	2	6	junction_1	5.44630353746669	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCTGATGCCTTTATTT	NA	False	NA	6	True	AATAAA	-21	NA	80565262	80650669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80565423_80565829_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
ES.7959.2	chr12	+	3921	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	-4	5	-4	1	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGGCTGATGCCTTTAT	NA	False	NA	4	True	AATAAA	-19	NA	80565759	80650667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
ES.7959.3	chr12	+	3763	16	NNC	ENSMUSG00000021130.9	novel	4222	16	NA	NA	80	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	6.48759500037486	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACATAGGCTGATGCCTT	NA	False	NA	1	True	AATAAA	-16	NA	80565843	80650664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468_80649328_80649398
ES.796.1	chr1	-	3537	23	FSM	ENSMUSG00000026204.16	ENSMUST00000027404.12	3554	23	3	14	-2	-14	multi-exon	TRUE	canonical	0	0	junction_15	2.05553073719909	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATGCCTTTGAGGCGC	NA	False	NA	-5	True	AATAAA	-28	NA	75240854	75223684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75224265_75224480_75224555_75224745_75224811_75225369_75225424_75228394_75228562_75228899_75229020_75229111_75229190_75229414_75229489_75229655_75229804_75229903_75230105_75230566_75230786_75231228_75231294_75231422_75231503_75231768_75231856_75232270_75232546_75233486_75233525_75233936_75234069_75234588_75234941_75235022_75235282_75237214_75237312_75238670_75238785_75238966_75239018_75240647
ES.7960.1	chr12	-	3639	6	Antisense	novelGene_ENSMUSG00000032705.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCATATCCTTTCATA	NA	False	NA	NA	False	NA	NA	NA	80509888	80503941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_80505554_80505910_80507402_80507816_80507986_80508356_80508421_80509194_80509280_80509670
ES.7960.2	chr12	-	176	2	Antisense	novelGene_ENSMUSG00000021130.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAACAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	80608166	80503971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_80504006_80608024
ES.7960.3	chr12	-	171	1	Intergenic	novelGene_6575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	80518021	80517850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80517800_80518000
ES.7960.4	chr12	-	172	1	Intergenic	novelGene_6578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGTTAGAGAA	NA	False	NA	NA	False	NA	NA	NA	80559464	80559292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80559300_80559500
ES.7960.5	chr12	-	177	1	Intergenic	novelGene_6579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	80563039	80562862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80562900_80563000
ES.7961.1	chr12	+	155	1	Intergenic	novelGene_6580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATTAAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	80669747	80669902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80669700_80669900
ES.7962.1	chr12	-	166	1	Intergenic	novelGene_6581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGGACAAGCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	80678478	80678312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80678300_80678500
ES.7963.1	chr12	-	167	1	Intergenic	novelGene_6582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGTTAT	NA	False	NA	NA	False	NA	NA	NA	80679648	80679481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80679500_80679600
ES.7964.1	chr12	-	4212	4	NIC	ENSMUSG00000021131.15	novel	506	5	NA	NA	-8	1	intron_retention	FALSE	canonical	3	979	junction_3	3355.25869179843	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	False	NA	0	True	AATAAA	-32	NA	80690630	80680794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80681302_80684263_80687819_80689562_80689620_80690537
ES.7964.10	chr12	-	4155	3	NIC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	-15	-6	intron_retention	FALSE	canonical	3	8000	junction_2	285.5	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690637	80680801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80681302_80684263_80687819_80690537
ES.7964.11	chr12	-	2580	4	NIC	ENSMUSG00000021131.15	novel	506	5	NA	NA	-7	-12	intron_retention	FALSE	canonical	3	979	junction_3	3787.00421030778	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTCACTGAGTGGTTT	NA	False	NA	-13	True	AATAAA	-19	NA	80690613	80680807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80681302_80684263_80684385_80687730_80689620_80690537
ES.7964.15	chr12	-	3816	4	NIC	ENSMUSG00000021131.15	novel	506	5	NA	NA	-15	-18	intron_retention	FALSE	canonical	3	979	junction_3	3738.85912486089	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTCACTGAG	NA	False	NA	-19	True	AATAAA	-13	NA	80690637	80680813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80684385_80687730_80687819_80689562_80689620_80690537
ES.7964.16	chr12	-	8061	2	NIC	ENSMUSG00000021131.15	novel	506	5	NA	NA	4	-18	intron_retention	FALSE	canonical	3	2049	junction_1	0	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTCACTGAG	NA	False	NA	-19	True	AATAAA	-13	NA	80690618	80680813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80687819_80689562
ES.7964.17	chr12	-	7106	2	NIC	ENSMUSG00000021131.15	novel	981	3	NA	NA	-16	-18	intron_retention	FALSE	canonical	3	8000	junction_1	0	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTCACTGAG	NA	False	NA	-19	True	AATAAA	-13	NA	80690638	80680813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80687819_80690537
ES.7964.18	chr12	-	9773	1	NIC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	-12	-18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	990	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTCACTGAG	NA	False	NA	-19	True	AATAAA	-13	NA	80690586	80680813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80680800_80690600
ES.7964.19	chr12	-	755	4	NNC	ENSMUSG00000021131.15	novel	506	5	NA	NA	0	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3912.77227664592	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTCACTGAG	NA	False	NA	-19	True	AATAAA	-13	NA	80690606	80680813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80681302_80684263_80684385_80687741_80687819_80690537
ES.7964.2	chr12	-	828	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	465	0	-28	0	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	False	NA	-1	True	AATAAA	-31	NA	80690650	80680795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ES.7964.21	chr12	-	658	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	477	158	-16	-158	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGGTTCCGGTCCTTG	NA	False	NA	NA	False	AATACA	-24	NA	80690638	80680953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ES.7964.22	chr12	-	714	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-31	-177	-15	-158	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGGTTCCGGTCCTTG	NA	False	NA	NA	False	AATACA	-24	NA	80690637	80680953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ES.7964.23	chr12	-	510	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	512	271	3	64	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGTGAATGATCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	80690603	80681066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ES.7964.24	chr12	-	1564	3	FSM	ENSMUSG00000021131.15	ENSMUST00000218740.2	981	3	257	-840	-6	-716	multi-exon	FALSE	canonical	3	8000	junction_2	695.5	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	80690628	80682999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80684385_80687730_80687819_80690537
ES.7964.3	chr12	-	878	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-41	-331	-25	-4	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGGTTTTCTTATTT	NA	False	NA	-5	True	AATAAA	-27	NA	80690647	80680799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ES.7964.4	chr12	-	656	3	NIC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	3	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3999	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGGTTTTCTTATTT	NA	False	NA	-5	True	AATAAA	-27	NA	80690603	80680799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80681302_80687730_80687819_80690537
ES.7964.5	chr12	-	7143	3	NIC	ENSMUSG00000021131.15	novel	506	5	NA	NA	0	-6	intron_retention	FALSE	canonical	3	979	junction_2	535	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690606	80680801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_80687819_80689562_80689620_80690537
ES.7964.6	chr12	-	3529	3	ISM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-32	-329	-16	-6	intron_retention	FALSE	canonical	3	8571	junction_1	410	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690638	80680801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_80681302_80684263_80684385_80687730
ES.7964.7	chr12	-	6846	2	ISM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-3	-329	-3	-6	intron_retention	FALSE	canonical	3	8571	junction_1	0	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690609	80680801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_80681302_80684263
ES.7964.9	chr12	-	776	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4138.24656909985	990	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGAGTGGTTTTCTTAT	NA	False	NA	-7	True	AATAAA	-25	NA	80690611	80680801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_80681302_80684270_80684385_80687730_80687819_80690537
ES.7965.1	chr12	+	5555	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-349	-5	7	0	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGCTCTTTACTTA	NA	False	NA	17	True	ATTAAA	-22	NA	80690663	80730116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.10	chr12	+	6863	6	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-6	-5	intron_retention	FALSE	canonical	3	11	junction_1	38.918376122341	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACCTTATGTGAGTGGC	NA	False	NA	7	True	ATTAAA	-12	NA	80690993	80730106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.11	chr12	+	4663	7	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-6	-2	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.9864840178139	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTGGCTCTTTACT	NA	False	NA	15	True	ATTAAA	-20	NA	80690993	80730114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.12	chr12	+	5029	8	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-5	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	38.0579579492293	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATGTGAGTGGCTCTT	NA	False	NA	11	True	ATTAAA	-16	NA	80690994	80730110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80691379_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.13	chr12	+	2439	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-289	5	-5	-5	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAATACTGACTCTTC	NA	False	NA	NA	False	AATAAA	-7	NA	80690994	80725123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.14	chr12	+	3133	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-2	1506	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.3744696293475	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAGTGAGTGCAGTCAT	NA	False	NA	NA	False	CATAAA	-25	NA	80690997	80728155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691191_80691317_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.15	chr12	+	4669	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-284	-2230	0	709	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTATGTTGTCCTTTTCT	NA	False	NA	NA	False	AAAAAG	-13	NA	80690999	80727358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.17	chr12	+	3579	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-13	1635	0	-1635	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTCCCTGTGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	80690999	80728476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.18	chr12	+	2552	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-13	2662	0	800	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCTCCCAGCCATGAAA	NA	False	NA	NA	False	NA	NA	NA	80690999	80727449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.19	chr12	+	6665	2	ISM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-284	9971	0	1192	intron_retention	FALSE	canonical	3	106	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAAGAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	80690999	80715157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80691751_80709243
ES.7965.20	chr12	+	6587	5	ISM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-13	2032	0	1430	intron_retention	FALSE	canonical	3	88	junction_2	12.5573683548744	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATACTGTATTTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	80690999	80728079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622
ES.7965.21	chr12	+	2931	9	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	3	1428	intron_retention	FALSE	non_canonical	0	0	junction_7	46.7972688839851	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATACTGTATTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	80691002	80728077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248_80727450_80727631_80727683_80727746
ES.7965.22	chr12	+	5597	4	NIC	ENSMUSG00000048833.10	novel	5427	6	NA	NA	3	-1432	intron_retention	FALSE	canonical	3	11	junction_1	47.5417944783558	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAATAATCTTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	80691002	80723696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80713510_80719999_80720069_80722622
ES.7965.24	chr12	+	2705	3	ISM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-280	9971	4	1192	5prime_fragment	FALSE	canonical	3	88	junction_2	9	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAAGAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	80691003	80715157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80691751_80709243_80709353_80713308
ES.7965.25	chr12	+	5078	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.3744696293475	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTATGTGAGTGGCTCT	NA	False	NA	10	True	ATTAAA	-15	NA	80691006	80730109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691191_80691317_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.26	chr12	+	5261	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_6	48.1481557067265	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACCTTATGTGAGTGGC	NA	False	NA	7	True	ATTAAA	-12	NA	80691009	80730106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726093_80726156_80726248
ES.7965.28	chr12	+	1904	6	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-1	810	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	46.5274112755051	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGAAATTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80691011	80727459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80723905_80724041_80726248
ES.7965.29	chr12	+	5062	6	FSM	ENSMUSG00000048833.10	ENSMUST00000219706.2	5427	6	361	4	4	1	multi-exon	FALSE	canonical	0	0	junction_5	42.8	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGAGTGGCTCTTTA	NA	False	NA	13	True	ATTAAA	-18	NA	80691017	80730112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80726248
ES.7965.3	chr12	+	3672	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-590	-927	37	-594	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATGTGTCACTGGTGTT	NA	False	NA	NA	False	AATAAA	-35	NA	80690693	80726055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.30	chr12	+	2311	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	7	707	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.3744696293475	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTATGTTGTCCTTTT	NA	False	NA	NA	False	AAAAAG	-11	NA	80691020	80727356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691191_80691317_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.31	chr12	+	3984	4	ISM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-259	2181	11	1955	intron_retention	FALSE	canonical	3	88	junction_2	7.34846922834953	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACCC	NA	False	NA	NA	False	NA	NA	NA	80691024	80722947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999
ES.7965.32	chr12	+	3201	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	14	1430	intron_retention	FALSE	canonical	0	0	junction_2	49.9068520100299	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATACTGTATTTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	80691027	80728079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691751_80709243_80709353_80712740_80712788_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.33	chr12	+	4344	7	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	21	512	intron_retention	FALSE	canonical	0	0	junction_6	40.2906109823782	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATTTTTTTTTTTAAA	NA	False	NA	NA	False	GGGGCT	-28	NA	80691034	80727161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80726156_80726248
ES.7965.34	chr12	+	7376	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-241	-4980	29	-3	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTTATGTGAGTGGCTC	NA	False	NA	9	True	ATTAAA	-14	NA	80691042	80730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.35	chr12	+	2763	1	Antisense	novelGene_ENSMUSG00000112263.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGAAAG	2961	False	NA	NA	False	NA	NA	NA	80695641	80698404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_80695600_80698400
ES.7965.36	chr12	+	8337	2	Intergenic	novelGene_6583	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAAATTAAATAAA	5740	False	NA	NA	False	NA	NA	NA	80698420	80706980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80700105_80700327
ES.7965.37	chr12	+	178	1	Intergenic	novelGene_6584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7438	False	NA	NA	False	NA	NA	NA	80700118	80700296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80700100_80700300
ES.7965.38	chr12	+	4288	1	FSM	ENSMUSG00000048833.10	ENSMUST00000217679.2	2674	1	1076	-2690	1076	-1446	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATTCAAA	NA	False	NA	NA	False	NA	NA	NA	80719394	80723682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80719400_80723700
ES.7965.4	chr12	+	4925	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	73	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.3953653665733	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCTTATGTGAGTGGCT	NA	False	NA	8	True	ATTAAA	-13	NA	80690729	80730107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80690763_80691317_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.5	chr12	+	3511	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-275	1965	81	1497	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTTCAGATCAGTGAG	NA	False	NA	NA	False	CATAAA	-16	NA	80690737	80728146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.6	chr12	+	2021	7	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-19	810	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.9864840178139	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATGAAATTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	80690980	80727459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.7	chr12	+	5409	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	-303	-2951	-19	1430	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATACTGTATTTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	80690980	80728079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ES.7965.8	chr12	+	5044	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	37.0471293883665	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTTATGTGAGTGGCTC	NA	False	NA	9	True	ATTAAA	-14	NA	80690988	80730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80691191_80691368_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7965.9	chr12	+	1259	7	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	-7	60	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.9864840178139	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTTTCTCTTAA	NA	False	NA	NA	False	TTTAAA	-18	NA	80690992	80726709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80691191_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ES.7966.1	chr12	+	3527	13	FSM	ENSMUSG00000066438.7	ENSMUST00000140770.2	3535	13	7	1	7	-1	multi-exon	FALSE	canonical	0	0	junction_2	3.32812092461931	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTACTGGTTTCCTTTGT	NA	False	NA	3	True	CATAAA	-4	NA	80739371	80770987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80739802_80752317_80752412_80752778_80752869_80753126_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092
ES.7966.2	chr12	+	4114	11	NIC	ENSMUSG00000066438.7	novel	3535	13	NA	NA	44	-2	intron_retention	FALSE	canonical	1	1	junction_8	3.38230690505755	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTACTGGTTTCCTTTG	NA	False	NA	2	True	CATAAA	-3	NA	80739408	80770986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80739802_80752317_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092
ES.7966.3	chr12	+	2528	14	NNC	ENSMUSG00000066438.7	novel	3535	13	NA	NA	59	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.37761513847695	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTTTTTAAAGAATTAA	NA	False	NA	17	True	CATAAA	-18	NA	80739423	80771001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80739802_80752317_80752412_80752778_80752869_80753126_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092_80769512_80770472
ES.7966.4	chr12	+	2300	2	FSM	ENSMUSG00000066438.7	ENSMUST00000153762.2	956	2	-30	-1314	-30	10	multi-exon	FALSE	canonical	3	14	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTGTTTTTAAAGAAT	NA	False	NA	14	True	CATAAA	-15	NA	80768475	80770998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80768870_80769092
ES.7967.1	chr12	+	211	1	Intergenic	novelGene_6585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCAATAACAAAGT	NA	False	NA	NA	False	NA	NA	NA	80778640	80778851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80778600_80778900
ES.7968.1	chr12	-	176	1	Intergenic	novelGene_6586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAATTACCAGAGGTAT	785	False	NA	NA	False	NA	NA	NA	80792229	80792053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80792100_80792200
ES.7969.1	chr12	-	3043	1	ISM	ENSMUSG00000062961.8	ENSMUST00000073251.8	5775	2	1841	1761	1841	-1761	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	80805620	80802577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_80802600_80805600
ES.797.1	chr1	-	341	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAAATAA	6666	False	NA	NA	False	NA	NA	NA	75271782	75271441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75271400_75271800
ES.797.2	chr1	-	158	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATTTA	6667	False	NA	NA	False	NA	NA	NA	75271781	75271623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75271600_75271800
ES.7970.1	chr12	-	177	1	Intergenic	novelGene_6587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAATACCCTGTCTC	NA	False	NA	NA	False	NA	NA	NA	80826212	80826035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80826000_80826200
ES.7971.1	chr12	+	5087	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	-112	2	-63	-2	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3347	False	NA	15	True	AATAAA	-17	NA	80837220	80927607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ES.7971.10	chr12	+	2104	1	Intergenic	novelGene_6589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTGAATGAAATTGTC	NA	False	NA	NA	False	NA	NA	NA	80911566	80913670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80911600_80913700
ES.7971.2	chr12	+	5145	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	-58	-2960	-58	-2	multi-exon	FALSE	canonical	1	6	junction_2	21.4689698557399	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3352	False	NA	15	True	AATAAA	-17	NA	80837225	80927607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ES.7971.5	chr12	+	4758	7	NNC	ENSMUSG00000021133.10	novel	2127	7	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	22.637849328552	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGATGTGAGATGTAG	3468	False	NA	9	True	AATAAA	-11	NA	80837341	80927601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921133_80923916
ES.7971.6	chr12	+	6416	5	NIC	ENSMUSG00000021133.10	novel	4977	6	NA	NA	9	-2	intron_retention	FALSE	canonical	3	48	junction_2	3.76662979332984	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGAGATGTAGTCCTTC	3468	False	NA	15	True	AATAAA	-17	NA	80837341	80927607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80837590_80874799_80875018_80915200_80916985_80920922_80921351_80923869
ES.7971.7	chr12	+	4995	6	NNC	ENSMUSG00000021133.10	novel	4977	6	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.6649461649432	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTGAGATGTAGTCC	3469	False	NA	12	True	AATAAA	-14	NA	80837342	80927604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920889_80921351_80923869
ES.7971.8	chr12	+	4121	1	Intergenic	novelGene_6588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAAGGA	192	False	NA	NA	False	NA	NA	NA	80854295	80858416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80854300_80858400
ES.7971.9	chr12	+	4612	5	NNC	ENSMUSG00000021133.10	novel	2127	7	NA	NA	-14615	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.8582589013249	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAGATGTAGTCCTT	NA	False	NA	14	True	AATAAA	-16	NA	80900866	80927606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80900980_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ES.7972.1	chr12	-	3210	1	Intergenic	novelGene_6590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGGAAGGCAGGCAG	9525	False	NA	NA	False	NA	NA	NA	80914892	80911682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80911700_80914900
ES.7973.1	chr12	+	143	1	Intergenic	novelGene_6591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAACAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	80935409	80935552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80935400_80935600
ES.7974.1	chr12	+	172	1	Intergenic	novelGene_6592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAGAAAGAGAGAGAG	255	False	NA	NA	False	NA	NA	NA	80945807	80945979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_80945800_80946000
ES.7975.1	chr12	-	181	1	Intergenic	novelGene_6593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTCACATTACAG	4399	False	NA	NA	False	NA	NA	NA	80964394	80964213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80964200_80964400
ES.7976.1	chr12	-	322	1	Intergenic	novelGene_6594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATATGTTCTCCTTC	3298	False	NA	NA	False	ATTAAA	-24	NA	80965495	80965173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80965200_80965500
ES.7977.1	chr12	-	209	1	Intergenic	novelGene_6595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGTAAGTCTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	80972492	80972283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80972300_80972500
ES.7978.1	chr12	-	177	1	Intergenic	novelGene_6596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAAATAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	80977691	80977514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_80977500_80977700
ES.7979.1	chr12	+	2789	7	FSM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	-65	-4	-37	0	multi-exon	FALSE	canonical	3	307	junction_1	608.09467921442	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992240	80997281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.10	chr12	+	3662	6	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	-7	0	intron_retention	FALSE	canonical	3	1859	junction_5	65.4259887200797	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992270	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.12	chr12	+	2885	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	562	junction_1	513.606096363957	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992270	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.14	chr12	+	2544	6	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	-7	2	intron_retention	FALSE	canonical	3	1780	junction_4	86.8792265158939	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992270	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267
ES.7979.15	chr12	+	1659	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-87	-4	-6	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992271	80997281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.2	chr12	+	1441	8	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	-37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	671.152922140669	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992240	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992372_80993389_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.21	chr12	+	2857	6	ISM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	-22	0	6	0	intron_retention	FALSE	canonical	3	307	junction_1	658.973929681592	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992283	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267
ES.7979.22	chr12	+	3448	5	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	1278	junction_1	301.18048990597	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992285	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992447_80993349_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.25	chr12	+	2431	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	18	intron_retention	FALSE	canonical	3	1780	junction_4	82.009484546335	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGTATTATTTATTC	NA	False	NA	NA	False	AATAAA	-41	NA	80992294	80997299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.26	chr12	+	1313	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-64	319	1	-313	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTGACTGTCTGAAG	NA	False	NA	NA	False	ATTAAA	-27	NA	80992294	80996958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.27	chr12	+	1488	8	NNC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	3	1	intron_retention	FALSE	non_canonical	0	0	junction_5	808.975719218886	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992296	80997272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994633_80995868_80995943_80996267_80996379_80996493
ES.7979.28	chr12	+	1717	9	NNC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	0	-328	intron_retention	FALSE	canonical	3	31	junction_6	869.700873504793	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTGCTCACACTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	80992305	80996943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996490
ES.7979.29	chr12	+	4212	5	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	1	2	intron_retention	FALSE	canonical	3	1859	junction_4	71.4785807077897	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992306	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.30	chr12	+	1954	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	18	junction_6	845.261608911703	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992306	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995241_80995868_80995943_80996267_80996379_80996493
ES.7979.31	chr12	+	1471	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	-52	149	1	-143	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTCTAAATTTGCT	NA	False	NA	3	True	ATTAAA	-25	NA	80992306	80997128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.34	chr12	+	1341	1	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	0	26	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	818	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTAGAGCTCTTGTGAT	NA	False	NA	NA	False	AAAACA	-3	NA	80992307	80993648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992300_80993600
ES.7979.35	chr12	+	1922	9	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	1	-1	intron_retention	FALSE	canonical	3	31	junction_6	797.640651781866	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTGTTTCTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	80992308	80997280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996493
ES.7979.37	chr12	+	2048	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_6	848.655701683551	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992308	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995861_80995943_80996267_80996379_80996493
ES.7979.38	chr12	+	2980	6	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	1	intron_retention	FALSE	canonical	3	1780	junction_3	89.8273900322168	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992308	80997272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.39	chr12	+	677	3	NNC	ENSMUSG00000021134.18	novel	547	4	NA	NA	1	-1	intron_retention	FALSE	canonical	1	1	junction_2	638.5	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTGTTTCTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	80992308	80997280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993499_80996890
ES.7979.4	chr12	+	1563	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	-36	0	-36	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992241	80997281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.40	chr12	+	3743	5	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	1874	junction_2	61.1529843916059	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992308	80997281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267
ES.7979.41	chr12	+	2084	8	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	-328	intron_retention	FALSE	canonical	3	97	junction_5	818.904494693106	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTGCTCACACTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	80992308	80996943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995437_80995868_80995943_80996267_80996379_80996490
ES.7979.42	chr12	+	2745	7	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	31	junction_4	887.435381059126	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992308	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996493
ES.7979.43	chr12	+	2563	7	NNC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	1	-143	intron_retention	FALSE	canonical	1	5	junction_5	832.978924636685	910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCTCTAAATTTGCT	NA	False	NA	3	True	ATTAAA	-25	NA	80992308	80997128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996272_80996379_80996493
ES.7979.45	chr12	+	4654	3	ISM	ENSMUSG00000021134.18	ENSMUST00000151036.2	3482	4	-841	-6	1	0	intron_retention	FALSE	canonical	3	1874	junction_1	66	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992308	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80994156_80994269_80994369_80994569
ES.7979.46	chr12	+	1689	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	1	2	intron_retention	FALSE	canonical	3	1278	junction_1	236.615487423983	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992308	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.47	chr12	+	4533	3	NIC	ENSMUSG00000021134.18	novel	3482	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1874	junction_1	69	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTGTTTCTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	80992308	80997280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994156_80994269_80995943_80996267
ES.7979.48	chr12	+	4430	11	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	9022	intron_retention	TRUE	non_canonical	0	0	junction_8	880.635475097387	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAAATCAGTGCTC	NA	False	NA	NA	False	AATAAA	-9	NA	80992308	81006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493_80996830_81002719_81003057_81003094_81003407_81003692
ES.7979.5	chr12	+	1240	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	-36	323	-36	-313	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTGACTGTCTGAAG	NA	False	NA	NA	False	ATTAAA	-27	NA	80992241	80996958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.51	chr12	+	1831	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	1	-315	intron_retention	FALSE	canonical	3	68	junction_5	830.705865138197	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTGTGACTGTCTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	80992308	80996956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996493
ES.7979.52	chr12	+	2392	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	1	-323	intron_retention	FALSE	canonical	3	1278	junction_1	250.508150233347	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTCACACTTTTGTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	80992308	80996948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.54	chr12	+	4238	5	NNC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	3	2	intron_retention	FALSE	canonical	2	5	junction_1	848.322609624428	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992310	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80994156_80994239_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.56	chr12	+	2871	7	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	3	2	intron_retention	FALSE	canonical	2	5	junction_3	801.381186175191	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992310	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994239_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.57	chr12	+	3545	5	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	3	2	intron_retention	FALSE	canonical	3	562	junction_1	608.014134292946	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992310	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992573_80993349_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.59	chr12	+	2447	8	NIC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	3	1	intron_retention	FALSE	canonical	3	68	junction_5	792.061273655321	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992310	80997272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995943_80996267_80996379_80996493
ES.7979.6	chr12	+	849	5	ISM	ENSMUSG00000021134.18	ENSMUST00000125814.9	886	6	-74	374	-30	-374	intron_retention	FALSE	canonical	3	1278	junction_1	285.55855354025	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTCGTTGGCCTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	80992247	80994904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569
ES.7979.60	chr12	+	1692	9	NNC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	3	-329	intron_retention	FALSE	canonical	3	68	junction_5	835.975244474978	908	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTCTGCTCACACTT	NA	False	NA	NA	False	ATTAAA	-11	NA	80992310	80996942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996490
ES.7979.61	chr12	+	4445	3	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	3	0	intron_retention	FALSE	canonical	3	2006	junction_1	3	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992310	80997281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994369_80994569_80995943_80996267
ES.7979.62	chr12	+	2018	9	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	68	junction_5	783.879524783624	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996493
ES.7979.63	chr12	+	2185	6	NIC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	307	junction_1	650.202553055584	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992443_80993349_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267
ES.7979.64	chr12	+	2187	8	NNC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_5	792.93881175263	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAACTGCTTTTGGTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	80992312	80997271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995330_80995856_80995943_80996267_80996379_80996490
ES.7979.66	chr12	+	3429	6	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	562	junction_1	554.001299637465	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992573_80993349_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.67	chr12	+	2576	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	68	junction_5	743.846072512208	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995943_80996267_80996379_80996493
ES.7979.68	chr12	+	1477	8	NNC	ENSMUSG00000021134.18	novel	1498	8	NA	NA	5	2	intron_retention	FALSE	canonical	2	36	junction_5	784.317693857508	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995878_80995943_80996267_80996379_80996490
ES.7979.69	chr12	+	2070	7	NIC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	307	junction_1	601.601381499596	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992443_80993349_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.70	chr12	+	2151	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	-1	intron_retention	FALSE	canonical	3	68	junction_5	830.705865138197	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTGTTTCTCTCA	NA	False	NA	NA	False	AATAAA	-22	NA	80992312	80997280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995437_80995868_80995943_80996267_80996379_80996493
ES.7979.72	chr12	+	3038	6	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	5	2	intron_retention	FALSE	canonical	3	1278	junction_1	258.149569048643	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80996379_80996493
ES.7979.74	chr12	+	4961	1	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	5	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	913	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80992312	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992300_80997300
ES.7979.78	chr12	+	2868	7	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_5	786.494684590359	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992312	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996242_80996379_80996493
ES.7979.79	chr12	+	3887	5	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	5	-317	intron_retention	FALSE	canonical	3	1859	junction_4	71.4785807077897	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	80992312	80996954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.81	chr12	+	1806	8	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	-7	1	intron_retention	FALSE	canonical	1	1	junction_2	752.959304534923	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAACTGCTTTTGGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	80992314	80997272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80992573_80993349_80993495_80993885_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.83	chr12	+	4307	4	NIC	ENSMUSG00000021134.18	novel	2720	7	NA	NA	8	0	intron_retention	FALSE	canonical	3	1859	junction_3	70.7530918052349	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992329	80997277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.84	chr12	+	3088	6	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	562	junction_1	541.834439658462	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAACTGCTTTTGGTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	80992386	80997271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80996379_80996493
ES.7979.85	chr12	+	1392	8	NNC	ENSMUSG00000021134.18	novel	3482	4	NA	NA	-76	2	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	658.985553091776	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80993073	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993116_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.86	chr12	+	2619	7	NNC	ENSMUSG00000021134.18	novel	3482	4	NA	NA	-74	2	intron_retention	FALSE	canonical	2	35	junction_1	709.042879913165	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80993075	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993116_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.87	chr12	+	1485	8	NNC	ENSMUSG00000021134.18	novel	3482	4	NA	NA	-58	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	652.729215350001	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80993091	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993227_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.88	chr12	+	3306	6	NNC	ENSMUSG00000021134.18	novel	3482	4	NA	NA	-54	-2	intron_retention	FALSE	canonical	3	53	junction_1	756.60594763721	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTCTGTTTCTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	80993095	80997279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993227_80993349_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ES.7979.89	chr12	+	1779	8	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	198	2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	851.739013394817	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80993347	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996493
ES.7979.9	chr12	+	1392	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	-7	142	-7	-132	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGCTTGTATATAAAG	NA	False	NA	14	True	ATTAAA	-36	NA	80992270	80997139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ES.7979.90	chr12	+	1944	7	NNC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	296	2	intron_retention	FALSE	canonical	3	31	junction_4	710.528305011294	913	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGCTTTTGGTCTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	80993445	80997273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_80993495_80994084_80994156_80994269_80994369_80994569_80995330_80995868_80995943_80996267_80996379_80996493
ES.7979.91	chr12	+	2205	1	Antisense	novelGene_ENSMUSG00000021135.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTTTTCTCCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	81005598	81007803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_81005600_81007800
ES.798.1	chr1	-	2426	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	168	-106	-22	106	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGTTCAAGAAGGAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	75294113	75284433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.10	chr1	-	1717	15	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	26	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	246.159698039252	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293990	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293788
ES.798.11	chr1	-	1818	14	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	5	-1	intron_retention	FALSE	canonical	3	522	junction_13	124.140500664873	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294086	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.12	chr1	-	2266	13	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	10	-1	intron_retention	FALSE	canonical	3	522	junction_12	128.941281855993	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294043	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293274_75293353_75293448_75293978
ES.798.13	chr1	-	1745	15	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	248.176831706584	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293955	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293725
ES.798.14	chr1	-	1685	14	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	522	junction_13	122.762193744726	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294068	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293448_75293978
ES.798.15	chr1	-	2179	14	FSM	ENSMUSG00000026209.16	ENSMUST00000185419.7	2833	14	28	626	-20	-1	multi-exon	FALSE	canonical	3	252	junction_13	192.021017094268	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293609	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ES.798.16	chr1	-	1623	15	NNC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	248.176831706584	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293956	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293848
ES.798.17	chr1	-	3925	14	NIC	ENSMUSG00000026209.16	novel	1571	15	NA	NA	17	-2	intron_retention	FALSE	canonical	3	252	junction_13	188.74866667502	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTCTCTGTGCTTTTTCT	NA	False	NA	-3	True	ATTAAA	-15	NA	75293620	75285210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ES.798.18	chr1	-	1936	16	NNC	ENSMUSG00000026209.16	novel	2510	15	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	284.912727378442	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75294294	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534_75293642_75293978
ES.798.19	chr1	-	1737	15	NNC	ENSMUSG00000026209.16	novel	2510	15	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	248.176831706584	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75294289	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75294065
ES.798.2	chr1	-	1870	15	FSM	ENSMUSG00000026209.16	ENSMUST00000185797.7	2510	15	-27	667	-27	2	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGCTTTTTCTGAAG	NA	False	NA	1	True	ATTAAA	-19	NA	75294330	75285206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.20	chr1	-	2377	13	NIC	ENSMUSG00000026209.16	novel	2833	14	NA	NA	23	-3	intron_retention	FALSE	canonical	3	252	junction_12	199.850499679691	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75293614	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ES.798.21	chr1	-	2722	8	NIC	ENSMUSG00000026209.16	novel	2833	14	NA	NA	871	-3	intron_retention	FALSE	canonical	3	891	junction_7	41.9538132829376	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75292576	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262
ES.798.22	chr1	-	2590	13	NIC	ENSMUSG00000026209.16	novel	2833	14	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	252	junction_12	197.055547724211	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75293649	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ES.798.23	chr1	-	1651	15	NNC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	9	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	247.672481643127	394	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75294007	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293869
ES.798.24	chr1	-	1478	14	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	270.832204215519	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTCTCTGTGCTTTTTC	NA	False	NA	-4	True	ATTAAA	-14	NA	75294051	75285211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.5	chr1	-	4697	12	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	2	-1	intron_retention	FALSE	canonical	3	522	junction_11	130.9811670268	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294051	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.6	chr1	-	1657	16	NNC	ENSMUSG00000026209.16	novel	1571	15	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	351.532682216983	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293610	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285354_75285521_75285588_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ES.798.7	chr1	-	2398	14	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	9	-1	intron_retention	FALSE	canonical	3	522	junction_13	124.199210090009	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294272	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.8	chr1	-	1839	15	NNC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	262.851445978639	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75294068	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75285588_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ES.798.9	chr1	-	2813	12	NIC	ENSMUSG00000026209.16	novel	2833	14	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	848	junction_11	53.9197444631853	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTGTGCTTTTTCTG	NA	False	NA	-2	True	ATTAAA	-16	NA	75293961	75285209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292715_75292973_75293088_75293184_75293274_75293353
ES.7980.1	chr12	-	2244	3	FSM	ENSMUSG00000112880.2	ENSMUST00000219062.2	1118	3	-3	-1123	-3	1123	multi-exon	FALSE	canonical	2	4	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	80992173	80988323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_80989717_80989815_80990004_80991510
ES.7980.2	chr12	-	1710	1	Genic_Genomic	ENSMUSG00000112880.2	novel	NA	NA	NA	NA	-662	-1676	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCGAAATCAACAGTTAT	NA	False	NA	NA	False	NA	NA	NA	80992832	80991122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_80991100_80992800
ES.7980.3	chr12	-	1490	1	Genic_Genomic	ENSMUSG00000112880.2	novel	NA	NA	NA	NA	-716	-1950	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	ACTAAA	-44	NA	80992886	80991396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_80991400_80992900
ES.7981.1	chr12	-	189	1	Intergenic	novelGene_6597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAAGATTTGCCT	NA	False	NA	NA	False	NA	NA	NA	81016661	81016472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81016500_81016700
ES.7982.1	chr12	-	1681	1	Intergenic	novelGene_6598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAGTATATTGTTG	NA	False	NA	NA	False	NA	NA	NA	81064897	81063216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81063200_81064900
ES.7982.2	chr12	-	1202	1	Intergenic	novelGene_6599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATAAATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	81065998	81064796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81064800_81066000
ES.7983.1	chr12	+	3778	12	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7437	-1472	intron_retention	FALSE	canonical	0	0	junction_1	48.2794893397713	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGACATCGCTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	81066144	81231712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066198_81151380_81151547_81152672_81152786_81182549_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.10	chr12	+	1706	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7398	-1489	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	43.9365072196991	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATCTTTTGTACAGGCA	NA	False	NA	NA	False	AAGAAA	-40	NA	81066183	81231695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066271_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.11	chr12	+	3216	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7398	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.3235386200836	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066183	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214259_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.12	chr12	+	3207	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7398	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	44.458470009162	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81066183	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.13	chr12	+	5073	12	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7394	-1	intron_retention	FALSE	canonical	2	7	junction_1	46.4010544194813	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGCTGGTGCCTCTTTC	NA	False	NA	12	True	AATAAA	-14	NA	81066187	81233183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.14	chr12	+	1879	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7393	-1340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4429327540028	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCATGTTTTCTTCTGG	NA	False	NA	NA	False	AATAGA	-25	NA	81066188	81231844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.15	chr12	+	3265	14	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7391	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8488574378471	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	81066190	81233185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81160658_81160739_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.16	chr12	+	1483	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7390	-1700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGTGTGGTTTGTTTCTG	NA	False	NA	NA	False	NA	NA	NA	81066191	81231484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.17	chr12	+	3229	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7387	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	57.1080846582455	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81066194	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.18	chr12	+	3262	14	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7381	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0457650205661	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGGTGCCTCTTTCTT	NA	False	NA	14	True	AATAAA	-16	NA	81066200	81233185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066271_81138150_81138234_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.2	chr12	+	3157	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7429	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066152	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066198_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.21	chr12	+	1958	15	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7354	-1608	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6177414011294	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTATTGTTAAGGTTTT	NA	False	NA	NA	False	AAGAAA	-15	NA	81066227	81231576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066280_81066752_81066910_81137984_81138234_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.22	chr12	+	3271	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-748	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGCTGGTGCCTCTTTC	NA	False	NA	12	True	AATAAA	-14	NA	81072833	81233183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81072998_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.23	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-53	-4	-33	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073548	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.24	chr12	+	3187	11	NIC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	49.985998039451	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073578	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81073933_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.25	chr12	+	2108	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-20	1351	0	-1351	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCTGTGGATAGCATG	NA	False	NA	NA	False	AATAGA	-14	NA	81073581	81231833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.26	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.28	chr12	+	1964	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	-16	1491	4	-1491	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGATCTTTTGTACAGG	NA	False	NA	NA	False	AAGAAA	-38	NA	81073585	81231693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.29	chr12	+	1882	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	4	1610	4	-1606	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTTAAGGTTTTTT	NA	False	NA	NA	False	AAGAAA	-17	NA	81073585	81231578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.3	chr12	+	3789	12	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7427	-1	intron_retention	FALSE	canonical	3	9	junction_1	57.6254649862023	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81066154	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066271_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.30	chr12	+	4580	13	NNC	ENSMUSG00000021136.14	novel	3439	13	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	52.0498559075815	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	81073585	81233184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81213155_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.31	chr12	+	3287	12	FSM	ENSMUSG00000021136.14	ENSMUST00000129362.2	3385	12	96	2	96	-2	multi-exon	FALSE	canonical	0	0	junction_11	52.34895627556	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGGTGCCTCTTT	NA	False	NA	11	True	AATAAA	-13	NA	81073697	81233182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81231322
ES.7983.32	chr12	+	5849	7	NIC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	110456	-1	intron_retention	FALSE	canonical	3	17	junction_1	55.8529816174173	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	173	False	NA	16	True	AATAAA	-18	NA	81184057	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81184787_81197392_81197483_81199446_81199528_81214280_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.33	chr12	+	171	1	Intergenic	novelGene_6601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGAGGTGGGCA	NA	False	NA	NA	False	NA	NA	NA	81207990	81208161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_81208000_81208200
ES.7983.34	chr12	+	8596	2	NIC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	150483	-1	intron_retention	FALSE	canonical	3	175	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81224084	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81230816_81231322
ES.7983.35	chr12	+	319	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157047	1710	157047	-1710	3prime_fragment	FALSE	canonical	3	175	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTCTTACGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	81230648	81231474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_81230816_81231322
ES.7983.36	chr12	+	515	2	ISM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	157072	1489	157072	-1489	3prime_fragment	FALSE	canonical	3	175	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATCTTTTGTACAGGCA	NA	False	NA	NA	False	AAGAAA	-40	NA	81230673	81231695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_81230816_81231322
ES.7983.4	chr12	+	3216	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7420	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81066161	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.5	chr12	+	3205	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7420	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.1779621723015	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGTGCCTCTTTCTTT	NA	False	NA	15	True	AATAAA	-17	NA	81066161	81233186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182640_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.6	chr12	+	6510	12	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7415	0	intron_retention	FALSE	canonical	0	0	junction_1	63.8782416168926	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	81066166	81233184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066271_81138150_81138234_81151380_81152786_81182549_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.7	chr12	+	3243	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7414	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.4429327540028	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	False	NA	16	True	AATAAA	-18	NA	81066167	81233187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.8	chr12	+	1856	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7414	-1351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.2909728420852	221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCTGTGGATAGCATG	NA	False	NA	NA	False	AATAGA	-14	NA	81066167	81231833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7983.9	chr12	+	3441	15	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7404	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	66.6177414011294	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066177	81233188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81066267_81066752_81066910_81138150_81138234_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ES.7984.1	chr12	-	2553	1	Intergenic	novelGene_6600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCGTGGTTTTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	81091966	81089413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81089400_81092000
ES.7985.1	chr12	+	178	1	Intergenic	novelGene_6605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	15	True	NA	NA	NA	81577595	81577773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_81577600_81577800
ES.7986.1	chr12	+	169	1	Intergenic	novelGene_6606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAATTAGCTGG	NA	False	NA	NA	False	NA	NA	NA	81588842	81589011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_81588800_81589000
ES.7987.1	chr12	+	1284	3	Antisense	novelGene_ENSMUSG00000089806.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAACAATT	NA	False	NA	NA	False	NA	NA	NA	81629342	81639072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_81629490_81635756_81635849_81638027
ES.7987.2	chr12	+	5265	3	NNC	ENSMUSG00000090244.2	novel	279	2	NA	NA	-5230	2653	intron_retention	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	81629342	81639067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81629870_81634276_81635221_81635273
ES.7988.1	chr12	-	863	5	NIC	ENSMUSG00000021139.18	novel	1043	6	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	124.884696820707	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAAATTGCTCTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	81579637	81405634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81579489
ES.7988.10	chr12	-	442	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	-13	2	1	0	multi-exon	FALSE	canonical	3	31	junction_1	143.25501736414	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	982	False	NA	-8	True	ATTAAA	-12	NA	81531900	81518868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ES.7988.11	chr12	-	599	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	17	1391	7	0	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	1005	False	NA	-8	True	ATTAAA	-12	NA	81531877	81518868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
ES.7988.12	chr12	-	786	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	6	1492	1	-1492	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGTATGCTTTTCAGT	NA	False	NA	-8	True	ATTAAA	-12	NA	81579650	81518868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ES.7988.13	chr12	-	1295	5	ISM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	-6	3230	-6	726	5prime_fragment	FALSE	canonical	3	129	junction_2	91.1838801543343	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTCATGGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	81579662	81520606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ES.7988.14	chr12	-	3086	4	ISM	ENSMUSG00000021139.18	ENSMUST00000110339.5	531	5	1	5616	1	-5616	5prime_fragment	FALSE	canonical	0	0	junction_1	97.8059302905504	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACTATATCATCTTGA	NA	False	NA	NA	False	NA	NA	NA	81579650	81533326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_81536019_81551317_81551414_81557602_81557740_81579489
ES.7988.15	chr12	-	1249	1	Antisense	novelGene_ENSMUSG00000099478.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAACGTTTACAGTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	81540222	81538973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_81539000_81540200
ES.7988.16	chr12	-	5957	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	13	-1315	1	1315	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTTGCCAGCAGA	NA	False	NA	NA	False	AATAAA	-15	NA	81579672	81543399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.17	chr12	-	4610	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	47	-2	16	2	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAATGGTACATGTCTTT	NA	False	NA	NA	False	NA	NA	NA	81579638	81544712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.18	chr12	-	3663	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	13	979	1	222	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTTGGTAAAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	81579672	81545693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.19	chr12	-	3470	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	11	1174	-1	27	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTGGGTGATT	NA	False	NA	21	True	AATAGA	-39	NA	81579674	81545888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.2	chr12	-	716	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	-19	-29	-2	29	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTTTTTTCCTGTCTC	979	False	NA	-17	True	TATAAA	-35	NA	81531903	81405770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ES.7988.20	chr12	-	3315	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	-8	-2	4	2	multi-exon	FALSE	canonical	3	34	junction_2	56.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTTTGTTTCCTTTT	NA	False	NA	-4	True	AATAGA	-14	NA	81579681	81545913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81579489
ES.7988.21	chr12	-	3704	8	Fusion	ENSMUSG00000090935.11_ENSMUSG00000002679.15	novel	596	6	NA	NA	-11	-12	multi-exon	FALSE	canonical	0	0	junction_2	192.239752520075	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTTTGCTTCAGTTGT	NA	False	NA	-18	True	NA	NA	NA	81641748	81545927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_81548941_81551317_81551414_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.22	chr12	-	2935	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	23	347	4	-347	multi-exon	FALSE	canonical	3	34	junction_2	56.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACTTTGGTTGATA	NA	False	NA	NA	False	AATAAA	-16	NA	81579650	81546262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81579489
ES.7988.23	chr12	-	3088	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	19	1548	7	-347	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACTTTGGTTGATA	NA	False	NA	NA	False	AATAAA	-16	NA	81579666	81546262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.24	chr12	-	843	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	14	3798	2	57	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCAGCCTTCCTGTC	NA	False	NA	0	True	AATAAA	-24	NA	81579671	81548512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ES.7988.25	chr12	-	7279	1	Intergenic	novelGene_6603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACCCAAAAAAA	2748	False	NA	NA	False	NA	NA	NA	81565512	81558233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81558200_81565500
ES.7988.26	chr12	-	5169	1	Intergenic	novelGene_6604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATGATTTTGAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	81570021	81564852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81564900_81570000
ES.7988.27	chr12	-	1902	1	NIC	ENSMUSG00000021139.18	novel	1043	6	NA	NA	9	-50058	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATATGTAA	NA	False	NA	NA	False	NA	NA	NA	81579670	81577768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81577800_81579700
ES.7988.28	chr12	-	4845	1	Genic_Genomic	ENSMUSG00000008438.4	novel	NA	NA	NA	NA	5759	713	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCCAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81609489	81604644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_81604600_81609500
ES.7988.29	chr12	-	1140	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	28	-109	-15	109	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAACTCACTTGTTT	NA	False	NA	NA	False	AATATA	-22	NA	81641752	81620221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.3	chr12	-	693	5	NIC	ENSMUSG00000021139.18	novel	1043	6	NA	NA	20	-165	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	124.884696820707	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTTCTCAGTGTTCCA	NA	False	NA	-45	True	AATAAA	-20	NA	81579631	81405798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81579489
ES.7988.30	chr12	-	1057	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	1	1	1	-1	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTTCCCTTGTCTCTG	NA	False	NA	0	True	AATAAA	-24	NA	81641779	81620331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.31	chr12	-	1028	7	NNC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.882056392996	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGCCTTTCCCTTGTCT	NA	False	NA	-3	True	AATAAA	-21	NA	81641770	81620334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81620735_81626332_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.33	chr12	-	7150	6	NIC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	2638	1	intron_retention	FALSE	canonical	3	382	junction_2	51.8243186158776	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATCATGCCTTTCCCTTG	NA	False	NA	-6	True	AATAAA	-18	NA	81638085	81620337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81635849_81638027
ES.7988.34	chr12	-	1025	7	NNC	ENSMUSG00000002679.15	novel	1003	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	185.882056392996	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCATGCCTTTCCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	81641757	81620338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81620760_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.35	chr12	-	1112	9	NNC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	207.176517431392	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCATCATGCCTTTCCC	NA	False	NA	-9	True	AATAAA	-15	NA	81641776	81620340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81640654_81640722_81641713
ES.7988.36	chr12	-	6739	4	NNC	ENSMUSG00000002679.15	novel	636	5	NA	NA	3895	-2536	intron_retention	TRUE	non_canonical	0	0	junction_1	0	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGACCGTAAAGCCCTG	NA	False	NA	NA	False	AAGAAA	-25	NA	81636828	81623005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81624504_81627127_81629863_81634269_81635225_81635277
ES.7988.37	chr12	-	3627	1	NIC	ENSMUSG00000002679.15	novel	1059	8	NA	NA	-5112	-2536	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGACCGTAAAGCCCTG	NA	False	NA	NA	False	AAGAAA	-25	NA	81626632	81623005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81623000_81626600
ES.7988.38	chr12	-	3122	4	NIC	ENSMUSG00000002679.15	novel	636	5	NA	NA	-9	-276	intron_retention	FALSE	canonical	3	360	junction_3	76.2932937201342	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTTTGTCTATCAGTG	NA	False	NA	NA	False	NA	NA	NA	81641746	81626652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81629490_81635756_81635849_81638027_81638188_81641713
ES.7988.4	chr12	-	874	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	-5	174	-5	-174	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTATGATGTTCTC	NA	False	NA	-54	True	AATAAA	-11	NA	81579684	81405807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ES.7988.5	chr12	-	419	4	NNC	ENSMUSG00000021139.18	novel	421	4	NA	NA	47921	-26391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.545241290221	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGATTTCTCTCTTGTCC	1268	False	NA	NA	False	NA	NA	NA	81531614	81432024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81432234_81521360_81521424_81527704_81527777_81531539
ES.7988.6	chr12	-	804	7	NNC	ENSMUSG00000021139.18	novel	757	5	NA	NA	7	-26395	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	129.395281555739	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGATTTCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	81579672	81432028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81432234_81432946_81432995_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ES.7988.7	chr12	-	554	5	NNC	ENSMUSG00000091803.8	novel	685	3	NA	NA	6	-26092	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	161.874951737445	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCATTCTTGATTTCT	1041	False	NA	NA	False	NA	NA	NA	81531841	81432033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81432234_81432946_81432995_81521360_81521424_81527704_81527777_81531670
ES.7988.8	chr12	-	5411	1	Intergenic	novelGene_6602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGTACTGGTACAGT	NA	False	NA	NA	False	NA	NA	NA	81516508	81511097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81511100_81516500
ES.7988.9	chr12	-	614	6	NIC	ENSMUSG00000021139.18	novel	2284	6	NA	NA	1	-1484	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	113.684827483706	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTCAGTCTACTTGC	NA	False	NA	0	True	ATTAAA	-20	NA	81579650	81518860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81518946_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ES.7989.1	chr12	-	178	1	Intergenic	novelGene_6607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGGAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	81646457	81646279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81646300_81646500
ES.799.1	chr1	-	177	2	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTAGGAATAAC	NA	False	NA	NA	False	NA	NA	NA	75300527	75300142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75300270_75300477
ES.7990.1	chr12	-	252	1	Intergenic	novelGene_6608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTATTT	NA	False	NA	NA	False	AATAAA	-44	NA	81669932	81669680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81669700_81669900
ES.7991.1	chr12	+	4936	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-278	-2616	-158	0	multi-exon	FALSE	canonical	3	20	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTATGTTGCTAGCT	NA	False	NA	8	True	CATAAA	-20	NA	81677864	81714331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.2	chr12	+	1591	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-130	581	-10	-581	multi-exon	FALSE	canonical	3	20	junction_1	7	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCGTGGAGACAGTCC	NA	False	NA	NA	False	AATAAA	-29	NA	81678012	81711134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.3	chr12	+	4034	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-117	-1875	3	-741	multi-exon	FALSE	canonical	3	20	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTATATCCTTTTATCA	NA	False	NA	NA	False	NA	NA	NA	81678025	81713590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.4	chr12	+	4210	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-111	-2057	9	-559	multi-exon	FALSE	canonical	3	20	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTCTTTACTGTAAAT	NA	False	NA	NA	False	NA	NA	NA	81678031	81713772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.5	chr12	+	2190	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-104	-44	16	44	multi-exon	FALSE	canonical	3	20	junction_1	7	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACACGGACAATCTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	81678038	81711759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.6	chr12	+	6051	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-77	-3932	43	1316	multi-exon	FALSE	canonical	3	20	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAAAGGAAAAGGAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81678065	81715647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.7	chr12	+	3203	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-65	-1096	55	1096	multi-exon	FALSE	canonical	3	20	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAACGTTTGAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	81678077	81712811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81678576_81707339_81707523_81710289
ES.7991.8	chr12	+	4126	1	NIC	ENSMUSG00000042734.7	novel	4754	4	NA	NA	31996	-67	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTGCTTTCAGATTTC	1018	False	NA	-59	True	AAGAAA	-22	NA	81710138	81714264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81710100_81714300
ES.7992.1	chr12	-	890	1	Antisense	novelGene_ENSMUSG00000042734.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTACTTTGCAAATT	NA	False	NA	NA	False	AATAAA	-14	NA	81710826	81709936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_81709900_81710800
ES.7993.1	chr12	+	4583	1	Intergenic	novelGene_6609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATCAAGATAATTCCAA	NA	False	NA	NA	False	NA	NA	NA	81807358	81811941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_81807400_81811900
ES.7994.1	chr12	+	2608	1	FSM	ENSMUSG00000113303.2	ENSMUST00000221909.2	1674	1	-1345	411	-1345	-411	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGGAGTCTTACAAAGT	NA	False	NA	NA	False	AATAAA	-16	NA	81826786	81829394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81826800_81829400
ES.7994.2	chr12	+	3547	1	FSM	ENSMUSG00000113303.2	ENSMUST00000221909.2	1674	1	-852	-1021	-852	1021	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTATGACACTTTCATAC	NA	False	NA	NA	False	ATTAAA	-13	NA	81827279	81830826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81827300_81830800
ES.7995.1	chr12	-	6424	1	FSM	ENSMUSG00000113184.2	ENSMUST00000221438.2	2223	1	-1328	-2873	-1328	2873	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGGTTCCTTGTGGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	81768154	81761730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81761700_81768200
ES.7995.10	chr12	-	4363	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	13	188	13	-188	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAGCTTCCATTCCTCC	NA	False	NA	NA	False	NA	NA	NA	81827936	81767971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.11	chr12	-	4298	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	-36	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACTATCTGTTTGAAA	NA	False	NA	NA	False	AATATA	-13	NA	81827819	81768048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.12	chr12	-	4176	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	60	328	60	-328	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATGGCGTGGCGTGGGT	NA	False	NA	NA	False	NA	NA	NA	81827889	81768111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.13	chr12	-	4030	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	-39	573	-39	456	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCGTGTCCTAAG	NA	False	NA	0	True	NA	NA	NA	81827988	81768356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.14	chr12	-	4181	13	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	8	456	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.2254858714545	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCGTGTCCTAAG	NA	False	NA	0	True	NA	NA	NA	81827941	81768356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81774104_81774174_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.15	chr12	-	8052	10	NNC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	-47	455	intron_retention	FALSE	canonical	3	5	junction_3	15.346210373884	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGTCTCGTGTCCTAA	NA	False	NA	-1	True	NA	NA	NA	81827830	81768357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.17	chr12	-	4162	11	NNC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	-52	450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	16.7104757562434	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGAGTGTCTCGTGT	NA	False	NA	-6	True	NA	NA	NA	81827835	81768362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819162_81819868_81827263
ES.7995.18	chr12	-	4083	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	30	449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATGAGTGTCTCGTG	NA	False	NA	-7	True	NA	NA	NA	81827919	81768363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.19	chr12	-	4638	10	NIC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	28	431	intron_retention	FALSE	canonical	3	49	junction_9	4.0490815907308	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTGTCACCTTTGGTA	NA	False	NA	-1	True	NA	NA	NA	81827921	81768381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.2	chr12	-	6151	2	ISM	ENSMUSG00000113184.2_ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	56928	-4453	-4195	1273	3prime_fragment	FALSE	canonical	3	56	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCCCGGGTCTCAGGAC	NA	False	NA	NA	False	AGTAAA	-14	NA	81771021	81763330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_81769298_81770837
ES.7995.20	chr12	-	3506	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	11	1047	11	-18	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTTCTGGTCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	81827938	81768830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.21	chr12	-	3063	10	ISM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	61	2980	61	-1951	5prime_fragment	FALSE	canonical	3	48	junction_3	4.42216638714053	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCTCTCCTTTTACT	NA	False	NA	NA	False	AGTAAA	-17	NA	81827888	81770763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.22	chr12	-	3791	9	NIC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	31	-1953	intron_retention	FALSE	canonical	3	49	junction_8	4.24264068711928	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTCTCTCCTTTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	81827918	81770765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81771651_81772495_81772609_81776456_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.3	chr12	-	7601	11	FSM	ENSMUSG00000113184.2_ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	147	-3184	-19	4	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTCCTTGGACTCT	NA	False	NA	NA	False	AATAAA	-22	NA	81827802	81764599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.4	chr12	-	5410	10	NIC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	-47	265	intron_retention	FALSE	canonical	3	49	junction_9	4.0490815907308	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGTTGGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	81827830	81767518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.6	chr12	-	4775	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	-22	-189	-22	189	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTTTGCTGTCCATT	NA	False	NA	NA	False	NA	NA	NA	81827971	81767594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.7	chr12	-	4504	10	NIC	ENSMUSG00000042724.9	novel	4564	11	NA	NA	81	175	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.8969279112952	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTTCACCCATTTT	NA	False	NA	NA	False	NA	NA	NA	81827868	81767608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_81769298_81770837_81771651_81772495_81772609_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.8	chr12	-	4620	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	-43	-13	-43	13	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAGCATGATACAGTTC	NA	False	NA	NA	False	AGTAAA	-33	NA	81827992	81767770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7995.9	chr12	-	4573	12	NNC	ENSMUSG00000042724.9	novel	3303	12	NA	NA	-34	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.5325538820971	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTAGCATGATACAGTT	NA	False	NA	NA	False	AGTAAA	-32	NA	81827817	81767771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_81769298_81770837_81771651_81772495_81772609_81772975_81773105_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ES.7996.1	chr12	-	184	1	Intergenic	novelGene_6610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAGTTCCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	81835215	81835031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81835000_81835200
ES.7997.1	chr12	-	618	4	Intergenic	novelGene_6611	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAGTGACTCATACAAT	NA	False	NA	NA	False	NA	NA	NA	81850764	81848497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81848690_81849508_81849717_81850091_81850229_81850683
ES.7998.1	chr12	-	193	1	Intergenic	novelGene_6612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAATTTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	81851877	81851684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81851700_81851900
ES.7999.1	chr12	-	163	1	Intergenic	novelGene_6613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGGAAAAAAGAAAGTCCA	NA	False	NA	NA	False	NA	NA	NA	81864828	81864665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81864700_81864800
ES.8.1	chr1	-	5342	1	FSM	ENSMUSG00000098104.2	ENSMUST00000182774.2	1470	1	-3792	-80	-3792	80	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCCTCTAAGGGGTGT	NA	False	NA	NA	False	AATAAA	-41	NA	4763418	4758076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_4758100_4763400
ES.80.1	chr1	-	175	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	10017348	10017173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_10017200_10017300
ES.800.1	chr1	+	2033	9	FSM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	137	858	137	-858	multi-exon	FALSE	canonical	2	4	junction_1	8.9154010005159	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCTGTCATCTTGACT	NA	False	NA	9	True	AATAAA	-20	NA	75337109	75344365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
ES.800.2	chr1	+	1702	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1629	862	-72	-862	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGCCCTGTCATCTT	NA	False	NA	5	True	AATAAA	-16	NA	75338601	75344361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
ES.800.3	chr1	+	1727	7	NIC	ENSMUSG00000026208.10	novel	3028	9	NA	NA	-7	-866	intron_retention	FALSE	canonical	3	24	junction_6	2.85287379477061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGCATGGCCCTGTCA	NA	False	NA	1	True	AATAAA	-12	NA	75338666	75344357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
ES.800.4	chr1	+	1802	7	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1698	859	-3	-859	intron_retention	FALSE	canonical	3	26	junction_1	2.14087209644419	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCCTGTCATCTTGAC	NA	False	NA	8	True	AATAAA	-19	NA	75338670	75344364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403
ES.8000.1	chr12	+	177	1	Intergenic	novelGene_6614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	81877431	81877608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_81877400_81877600
ES.8001.1	chr12	+	8328	35	NIC	ENSMUSG00000021140.10	novel	8318	36	NA	NA	-133	-2	combination_of_known_splicesites	FALSE	canonical	1	5	junction_6	9.58715259134268	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCTATGTGGCTCTG	NA	False	NA	7	True	AGTAAA	-14	NA	81906663	82043895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.10	chr12	+	7964	33	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-60	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	9.06395462463819	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCTATGTGGCTCTG	NA	False	NA	7	True	AGTAAA	-14	NA	81906736	82043895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.11	chr12	+	7288	34	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-53	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	9.34857079671703	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGCTGCATGAAAGGCAA	NA	False	NA	12	True	AATAAA	-19	NA	81906743	82043134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996903_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.12	chr12	+	7621	36	NIC	ENSMUSG00000021140.10	novel	8318	36	NA	NA	-52	-43	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	10.8735214805396	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGCATGAAAGGCAAAC	NA	False	NA	14	True	AATAAA	-21	NA	81906744	82043136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.13	chr12	+	7325	34	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-44	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.31609979203582	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGCTGCATGAAAGGCA	NA	False	NA	11	True	AATAAA	-18	NA	81906752	82043133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960126_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.14	chr12	+	7429	35	NNC	ENSMUSG00000021140.10	novel	8318	36	NA	NA	-43	-43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	11.1162853196542	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGCATGAAAGGCAAAC	NA	False	NA	14	True	AATAAA	-21	NA	81906753	82043136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006817_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.15	chr12	+	6168	22	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-24	350	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.9473029261397	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCCTTCAGGACTAGC	NA	False	NA	NA	False	AATAAA	-13	NA	81906772	82043529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.16	chr12	+	12128	36	NIC	ENSMUSG00000021140.10	novel	12139	36	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	10.8735214805396	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCATTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	81906795	82047694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.17	chr12	+	6355	33	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.3982702137182	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTATGTGGCTCTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	81906798	82043897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042433_82042636_82042795
ES.8001.18	chr12	+	6994	33	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	4	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.49295585881974	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGCATGAAAGGCAAACT	NA	False	NA	15	True	AATAAA	-22	NA	81906807	82043137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82006842_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.19	chr12	+	7146	33	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	8	-27	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	9.06395462463819	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTTGGAGCCTCTC	NA	False	NA	30	True	AATAAA	-37	NA	81906811	82043152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.2	chr12	+	7397	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-130	-27	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGTTGGAGCCTCTC	NA	False	NA	30	True	AATAAA	-37	NA	81906666	82043152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.20	chr12	+	3763	10	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	13	-13244	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	4.96655480858378	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAGAATTTGCATTC	NA	False	NA	NA	False	NA	NA	NA	81906816	82000323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561
ES.8001.21	chr12	+	9104	34	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	56	1205	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	9.23979098106323	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGAAGTCTTGTTTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	81906859	82045102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006817_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.23	chr12	+	4414	6	ISM	ENSMUSG00000021140.10	ENSMUST00000221721.2	8318	36	77	75912	70	-45591	5prime_fragment	FALSE	canonical	3	26	junction_5	2.24499443206436	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGAGATTTATGTTGT	NA	False	NA	NA	False	AATGAA	-17	NA	81906873	81967976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438
ES.8001.24	chr12	+	4025	12	NIC	ENSMUSG00000021140.10	novel	12139	36	NA	NA	77	-13236	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	12.8165698535106	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGCATTCTTGAGATT	NA	False	NA	NA	False	NA	NA	NA	81906880	82000331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561
ES.8001.25	chr12	+	11733	34	Fusion	ENSMUSG00000113622.2_ENSMUSG00000021140.10	novel	7827	35	NA	NA	78	5	multi-exon	FALSE	canonical	3	25	junction_6	7.07392423202313	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTGATCAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	81906881	82047703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.26	chr12	+	6915	31	NIC	ENSMUSG00000021140.10	novel	12139	36	NA	NA	-879	-354	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.5902257671425	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCAGGACTAGCCCCTC	5347	False	NA	NA	False	AATAAA	-18	NA	81964537	82043534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.28	chr12	+	4664	29	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	708	-28	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	9.67343036890434	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTCTGTTGGAGCCTCT	6934	False	NA	29	True	AATAAA	-36	NA	81966124	82043151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022164_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.29	chr12	+	5422	29	ISM	ENSMUSG00000021140.10	ENSMUST00000021567.6	12139	36	73615	3808	15002	2	3prime_fragment	FALSE	canonical	1	4	junction_3	10.4042647260532	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACTTGTCTATGTGG	9185	False	NA	2	True	AGTAAA	-9	NA	81980418	82043890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_81980490_81993704_81993796_81995131_81995190_81996874_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.3	chr12	+	8434	36	FSM	ENSMUSG00000021140.10	ENSMUST00000221721.2	8318	36	-110	-6	-110	-3	multi-exon	FALSE	canonical	0	0	junction_6	11.0421825704146	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCTATGTGGCTCT	NA	False	NA	6	True	AGTAAA	-13	NA	81906686	82043894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975018_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.30	chr12	+	6475	17	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-4301	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.7765657133139	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACTTGTCTATGTGG	NA	False	NA	2	True	AGTAAA	-9	NA	82015659	82043890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022568_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.31	chr12	+	4119	17	ISM	ENSMUSG00000021140.10	ENSMUST00000222005.2	7827	35	110902	4	-1944	-4	3prime_fragment	FALSE	canonical	3	26	junction_4	7.77717011515114	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACTTGTCTATGTGGCTC	NA	False	NA	5	True	AGTAAA	-12	NA	82018016	82043893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.33	chr12	+	3129	8	ISM	ENSMUSG00000021140.10	ENSMUST00000221675.2	4812	26	62166	-1047	7622	1047	3prime_fragment	FALSE	canonical	3	32	junction_6	3.10365156891435	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGTTTTATGTAAAT	NA	False	NA	NA	False	TTTAAA	-28	NA	82027582	82041470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800
ES.8001.4	chr12	+	7758	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-106	-351	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGACTAGCCCCTCCCT	NA	False	NA	NA	False	AATAAA	-21	NA	81906690	82043537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.5	chr12	+	4162	6	ISM	ENSMUSG00000021140.10	ENSMUST00000221721.2	8318	36	-84	76325	-84	-46004	5prime_fragment	FALSE	canonical	3	26	junction_5	2.24499443206436	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGAGTGTTGTGTCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	81906712	81967563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438
ES.8001.6	chr12	+	5476	34	NNC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-77	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.8843996667947	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGCTGCATGAAAGGCAA	NA	False	NA	12	True	AATAAA	-19	NA	81906719	82043134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81906821_81906954_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.7	chr12	+	7341	34	NNC	ENSMUSG00000021140.10	novel	12139	36	NA	NA	-74	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	10.7186234605424	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAGCTGCATGAAAGGC	NA	False	NA	10	True	AATAAA	-17	NA	81906722	82043132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996874_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028925_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.8	chr12	+	8085	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTATGTGGCTCTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	81906723	82043897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8001.9	chr12	+	7449	34	NIC	ENSMUSG00000021140.10	novel	7827	35	NA	NA	-72	83	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	7.07392423202313	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCATGGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	81906724	82043262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ES.8002.1	chr12	-	207	1	Intergenic	novelGene_6615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGGAAAGTCGACCACA	NA	False	NA	NA	False	NA	NA	NA	81925668	81925461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81925500_81925700
ES.8003.1	chr12	-	174	1	Intergenic	novelGene_6616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	81926335	81926161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81926200_81926300
ES.8004.1	chr12	-	4385	1	Intergenic	novelGene_6617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATGGGAGCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	81974868	81970483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_81970500_81974900
ES.8005.1	chr12	-	158	1	Intergenic	novelGene_6618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	82203590	82203432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_82203400_82203600
ES.8006.1	chr12	+	6293	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	46.1443647697094	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	9996	False	NA	21	True	NA	NA	NA	82216127	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
ES.8006.10	chr12	+	4709	18	NNC	ENSMUSG00000042700.17	novel	5907	22	NA	NA	46	7629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	60.4466077422319	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTGCCAGCCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	82216139	82479541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216251_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82469833_82469870_82471786_82472230_82479526
ES.8006.11	chr12	+	6134	24	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	46	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	44.6363165611105	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGCTCAAATGTGAA	NA	False	NA	7	True	NA	NA	NA	82216139	82497034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.12	chr12	+	6335	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	49.1601464603188	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216143	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82335369_82335500_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.13	chr12	+	6310	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	32.3541331294095	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216143	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.14	chr12	+	5393	22	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-49	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	37.1858725276987	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCTTTATTTTTTGC	NA	False	NA	23	True	NA	NA	NA	82216144	82497050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.15	chr12	+	6193	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.1780194945019	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCTTTATTTTTTGC	NA	False	NA	23	True	NA	NA	NA	82216157	82497050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.16	chr12	+	6229	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	47.965053945555	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216161	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216251_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.17	chr12	+	6411	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	45.5984912031089	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216165	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82309113_82309237_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.18	chr12	+	8693	24	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-24	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	35.829147188843	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTGAATGTCTTTAT	NA	False	NA	16	True	NA	NA	NA	82216169	82497043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.19	chr12	+	6295	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_24	41.0994517062643	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216171	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496179_82496674
ES.8006.2	chr12	+	6254	24	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	43	6	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	21.8092781282731	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTATTTTTTGCACAA	NA	False	NA	27	True	NA	NA	NA	82216136	82497054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.20	chr12	+	6184	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	46.8564407703644	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216172	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.21	chr12	+	4309	23	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-19	-60	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	36.042789079483	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82216174	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.22	chr12	+	6514	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.0964063791547	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAATGTCTTTATTTTT	NA	False	NA	20	True	NA	NA	NA	82216174	82497047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82386521_82386827_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.23	chr12	+	6016	23	NIC	ENSMUSG00000042700.17	novel	5907	22	NA	NA	-19	-5	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	33.1514182038359	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTATGAATACTCTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	82216174	82493898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.24	chr12	+	6082	23	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-18	-63	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.6621254285642	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAGAAAAACAAAAAA	NA	False	NA	-45	True	NA	NA	NA	82216175	82496982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.25	chr12	+	5911	23	NNC	ENSMUSG00000042700.17	novel	5907	22	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	36.1578552443002	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATGAATACTCTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	82216175	82493899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.26	chr12	+	6314	26	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-16	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	49.6065157010649	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82216177	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82377815_82378022_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.27	chr12	+	6199	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-13	-60	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.381335533735	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82216180	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216267_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.28	chr12	+	5680	14	ISM	ENSMUSG00000042700.17	ENSMUST00000220963.2	5907	22	-37	28543	-11	-6552	5prime_fragment	FALSE	canonical	3	101	junction_3	16.1035848116804	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-18	NA	82216182	82465360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677
ES.8006.3	chr12	+	7828	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	32.3541331294095	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTTATTGCTCGGG	NA	False	NA	17	True	AATAAA	-26	NA	82216137	82498560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.30	chr12	+	7584	24	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-2	0	intron_retention	FALSE	canonical	1	1	junction_16	35.6673350584275	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216191	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82470659_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.31	chr12	+	7620	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_6	47.9335206301394	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216192	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82470663_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.32	chr12	+	6118	23	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.9557809234924	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAATGTGAATGTCTTTA	NA	False	NA	15	True	NA	NA	NA	82216194	82497042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.33	chr12	+	5956	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	48.2545154766773	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTGAATGTCTTTAT	NA	False	NA	16	True	NA	NA	NA	82216195	82497043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484656_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
ES.8006.35	chr12	+	7512	27	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	47.3334670248411	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATTGCTCGGGTTT	NA	False	NA	20	True	AATAAA	-29	NA	82216198	82498563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82388349_82388570_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.36	chr12	+	6117	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	53.0242999849021	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATGAATACTCTTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	82216199	82493899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82359485_82359647_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.37	chr12	+	6298	27	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.97046857072	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAATGTCTTTATTT	NA	False	NA	18	True	NA	NA	NA	82216199	82497045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216282_82216793_82216851_82281236_82281299_82312730_82312800_82358122_82358184_82387435_82387493_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82470567_82470659_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.38	chr12	+	6217	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	41.1582312545134	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216201	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387522_82387556_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.39	chr12	+	6408	27	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	8	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.5307461391977	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGCTCAAATGTGAA	NA	False	NA	7	True	NA	NA	NA	82216201	82497034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82377815_82378022_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.40	chr12	+	6181	26	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	47.7435482552355	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216205	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496114_82496166_82496674
ES.8006.41	chr12	+	6107	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	43.6326203150299	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216210	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496114_82496166_82496674
ES.8006.42	chr12	+	7651	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	41.7122875248476	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTTATTGCTCGGG	NA	False	NA	17	True	AATAAA	-26	NA	82216212	82498560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
ES.8006.44	chr12	+	5903	22	FSM	ENSMUSG00000042700.17	ENSMUST00000220963.2	5907	22	1	3	1	-3	multi-exon	FALSE	canonical	3	101	junction_3	22.1136007440779	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTATGAATACTCTTTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	82216220	82493900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.45	chr12	+	6238	27	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.9656581828789	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAATGTCTTTATTT	NA	False	NA	18	True	NA	NA	NA	82216249	82497045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82265978_82266052_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.46	chr12	+	7640	24	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	3	101	junction_3	21.8092781282731	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGGATTGGTTATTGC	NA	False	NA	12	True	AATAAA	-21	NA	82216251	82498555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.49	chr12	+	6552	23	FSM	ENSMUSG00000042700.17	ENSMUST00000166429.9	8215	23	151	1512	95	0	multi-exon	FALSE	canonical	3	101	junction_2	20.7113176231246	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216344	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.50	chr12	+	3588	6	NNC	ENSMUSG00000042700.17	novel	5907	22	NA	NA	207	-34039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.5276796185018	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGTGTCATGGTCT	NA	False	NA	NA	False	ACTAAA	-19	NA	82216456	82410911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216851_82281236_82281303_82387435_82387497_82387532_82389274_82404006_82404138_82409716
ES.8006.51	chr12	+	6395	24	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	207	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	35.278851363064	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCAAATGTGAATGTCT	NA	False	NA	12	True	NA	NA	NA	82216456	82497039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.52	chr12	+	6459	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	221	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	41.6398038406629	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216470	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.53	chr12	+	6491	24	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	222	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	32.341397210618	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAATGTCTTTATTT	NA	False	NA	18	True	NA	NA	NA	82216471	82497045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.54	chr12	+	6487	25	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	222	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	49.5052606632198	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82216471	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216851_82281236_82281303_82358122_82358184_82359485_82359647_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.55	chr12	+	6372	23	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	275	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.4440706664994	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAATGTCTTTATTT	NA	False	NA	18	True	NA	NA	NA	82216524	82497045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82216851_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.57	chr12	+	2654	7	NNC	ENSMUSG00000042700.17	novel	5907	22	NA	NA	-10	-34039	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	44.3374058279863	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGTGTCATGGTCT	NA	False	NA	NA	False	ACTAAA	-19	NA	82216789	82410911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82410603
ES.8006.58	chr12	+	6350	23	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	35.4861164796871	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216880	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82217185_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.59	chr12	+	6253	24	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	142	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.4381858647375	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216941	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82217185_82281236_82281303_82358122_82358184_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.6	chr12	+	2602	9	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	59.1687206216257	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTTATTGCTCGGG	NA	False	NA	17	True	AATAAA	-26	NA	82216137	82498560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216267_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82387535_82487632_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.60	chr12	+	7688	23	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	35.4861164796871	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTGGTTATTGCTCGGG	NA	False	NA	17	True	AATAAA	-26	NA	82217054	82498560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82217185_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.61	chr12	+	6230	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	-22123	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	57.1549884816132	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGCTCAAATGTGAA	NA	False	NA	7	True	NA	NA	NA	82281235	82497034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82281303_82312730_82312800_82358122_82358184_82359485_82359647_82387435_82387497_82387532_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
ES.8006.62	chr12	+	3451	2	Intergenic	novelGene_6620	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTCCCAGAACGTTTAG	NA	False	NA	NA	False	NA	NA	NA	82328418	82332680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_82328765_82329575
ES.8006.63	chr12	+	2896	1	NIC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	-1200	20	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGACGCCACACACT	NA	False	NA	NA	False	NA	NA	NA	82356922	82359818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82356900_82359800
ES.8006.64	chr12	+	6075	21	NNC	ENSMUSG00000042700.17	novel	2395	8	NA	NA	9415	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.4292464923446	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82367537	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82367757_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.65	chr12	+	5790	1	Intergenic	novelGene_6621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAAGAAAAATCTGTT	4174	False	NA	NA	False	NA	NA	NA	82377327	82383117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_82377300_82383100
ES.8006.66	chr12	+	7422	20	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	29312	6	-1606	-6	3prime_fragment	FALSE	canonical	3	117	junction_1	18.1124526729059	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAAAATGGATTGGTT	NA	False	NA	7	True	AATAAA	-16	NA	82387434	82498550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.67	chr12	+	4028	13	NIC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	-1265	-2215	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	39.7509608549138	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAGTTAGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-16	NA	82387775	82469697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82469434
ES.8006.68	chr12	+	5051	19	NIC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	-915	-60	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	38.2477305063828	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82388125	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82496083_82496166_82496674
ES.8006.69	chr12	+	4595	20	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	-348	-60	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	37.1320172304321	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82388692	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434483_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.7	chr12	+	1965	4	FSM	ENSMUSG00000042700.17	ENSMUST00000222849.2	1831	4	-110	-24	46	24	multi-exon	FALSE	canonical	3	101	junction_3	11.0855260988773	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACGCCACACACTGTAA	NA	False	NA	NA	False	NA	NA	NA	82216139	82359822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122
ES.8006.70	chr12	+	4274	20	NNC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	-55	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	45.0546605544102	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82388985	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496131_82496674
ES.8006.71	chr12	+	1943	9	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	105553	4659	-3713	-6	internal_fragment	FALSE	canonical	3	147	junction_3	13.3954283246188	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATTATGAATACTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	82463675	82493897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.72	chr12	+	176	1	Intergenic	novelGene_6622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	82466660	82466836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_82466700_82466800
ES.8006.73	chr12	+	7184	6	NIC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	1850	-62	intron_retention	FALSE	canonical	3	151	junction_4	14.0370937162933	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAAACAAAAAAT	NA	False	NA	-44	True	NA	NA	NA	82469238	82496983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ES.8006.74	chr12	+	3181	10	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	2810	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.5612916340476	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82470198	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82471396_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82494233_82494401_82496080_82496166_82496674
ES.8006.75	chr12	+	2233	8	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	113895	858	4629	650	3prime_fragment	FALSE	canonical	3	131	junction_6	16.8498773688991	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTCAACCAGTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	82472017	82497698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ES.8006.76	chr12	+	554	3	ISM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	135422	1571	6224	-60	3prime_fragment	FALSE	canonical	3	131	junction_1	16.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAAAAATTA	NA	False	NA	-42	True	NA	NA	NA	82493544	82496985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_82493706_82496083_82496166_82496674
ES.8006.77	chr12	+	2790	2	NIC	ENSMUSG00000042700.17	novel	7488	21	NA	NA	6363	-63	intron_retention	FALSE	canonical	3	164	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAGAAAAACAAAAAA	NA	False	NA	-45	True	NA	NA	NA	82493683	82496982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_82496166_82496674
ES.8006.8	chr12	+	6283	25	NNC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_23	41.3737831308131	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216139	82497048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496114_82496166_82496674
ES.8006.9	chr12	+	10436	22	NNC	ENSMUSG00000042700.17	novel	8215	23	NA	NA	46	-6	intron_retention	FALSE	canonical	1	5	junction_20	36.4716520861846	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCAAATGTGAATGTCT	NA	False	NA	12	True	NA	NA	NA	82216139	82497039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496114_82496166_82496674
ES.8007.1	chr12	-	6602	1	Intergenic	novelGene_6619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82232711	82226109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_82226100_82232700
ES.8008.1	chr12	+	154	1	Intergenic	novelGene_6623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	82500005	82500159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_82500000_82500200
ES.8009.1	chr12	-	1824	6	ISM	ENSMUSG00000021221.16	ENSMUST00000147469.8	2940	9	35326	883	-21141	-877	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTGGGCACAGTGATTA	NA	False	NA	NA	False	NA	NA	NA	83362343	83261401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_83262586_83263101_83263184_83273041_83273155_83319112_83319242_83341135_83341274_83362165
ES.801.1	chr1	-	183	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75349085	75348902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75348900_75349100
ES.8010.1	chr12	+	178	1	Intergenic	novelGene_6624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAATT	4507	False	NA	NA	False	NA	NA	NA	83525070	83525248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83525100_83525200
ES.8011.1	chr12	+	173	1	Intergenic	novelGene_6625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	83558526	83558699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83558500_83558700
ES.8012.1	chr12	+	178	1	Intergenic	novelGene_6626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGATAACAGCTGTG	NA	False	NA	NA	False	NA	NA	NA	83564937	83565115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83564900_83565100
ES.8013.1	chr12	+	3011	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	-23	-980	-23	975	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGTCAATCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	83567216	83589669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.10	chr12	+	2343	15	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-47	975	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	70.1882672327994	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGTCAATCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	83567360	83589669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138_83589004_83589527
ES.8013.11	chr12	+	1964	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-37	70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	72.4670910823722	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTATGTACTTCTTTG	NA	False	NA	15	True	AATAAA	-28	NA	83567370	83588764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582661_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.12	chr12	+	3060	13	NNC	ENSMUSG00000021222.10	novel	663	4	NA	NA	3	69	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.1115374330439	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTATGTACTTCTTT	NA	False	NA	14	True	AATAAA	-27	NA	83567410	83588763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83568638_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.13	chr12	+	2077	14	NIC	ENSMUSG00000021222.10	novel	2005	13	NA	NA	91	60	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	72.7340946235674	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCATCATAAAAGGTATG	NA	False	NA	5	True	AATAAA	-18	NA	83567498	83588754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83567655_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.14	chr12	+	6006	11	NIC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	63	0	intron_retention	FALSE	canonical	3	216	junction_6	21.2941306467299	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTAATTTTGCCAAA	NA	False	NA	10	True	NA	NA	NA	83571624	83588689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83573015_83575941_83576043_83576750_83576909_83577597_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.15	chr12	+	1928	13	NNC	ENSMUSG00000021222.10	novel	2005	13	NA	NA	68	68	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_8	65.1972967231004	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGGTATGTACTTCTT	NA	False	NA	13	True	AATAAA	-26	NA	83572915	83588762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.16	chr12	+	1677	14	NNC	ENSMUSG00000021222.10	novel	2005	13	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	72.2254851839652	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTTTGCCAAAGTATA	NA	False	NA	15	True	NA	NA	NA	83572915	83588694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138_83588362_83588547
ES.8013.17	chr12	+	1768	12	ISM	ENSMUSG00000021222.10	ENSMUST00000223291.2	2005	13	3166	-2	3092	2	3prime_fragment	FALSE	canonical	3	216	junction_7	23.2588737176066	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTGCCAAAGTATATT	NA	False	NA	17	True	NA	NA	NA	83575939	83588696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.18	chr12	+	5131	3	NIC	ENSMUSG00000021222.10	novel	2005	13	NA	NA	165	3	intron_retention	FALSE	canonical	3	253	junction_1	11.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTGCCAAAGTATATTA	NA	False	NA	18	True	NA	NA	NA	83581798	83588697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83586256_83586562_83586678_83588138
ES.8013.2	chr12	+	2095	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	-6	-81	-6	76	multi-exon	FALSE	canonical	3	216	junction_9	23.528907060372	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTCTTTGCCTATT	NA	False	NA	21	True	AATAAA	-34	NA	83567233	83588770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.3	chr12	+	3403	13	NIC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-73	0	intron_retention	FALSE	canonical	3	216	junction_8	24.4817108606949	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTTTGCCAAAGTATA	NA	False	NA	15	True	NA	NA	NA	83567334	83588694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.5	chr12	+	3566	13	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-72	66	intron_retention	FALSE	non_canonical	0	0	junction_4	75.5998236329512	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAAGGTATGTACTTC	NA	False	NA	11	True	AATAAA	-24	NA	83567335	83588760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577386_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.6	chr12	+	3344	13	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-63	68	intron_retention	FALSE	canonical	2	5	junction_5	74.1096691097427	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGGTATGTACTTCTT	NA	False	NA	13	True	AATAAA	-26	NA	83567344	83588762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83579156_83580644_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.7	chr12	+	3639	13	NIC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-59	2	intron_retention	FALSE	canonical	3	223	junction_5	21.0018187043144	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTGCCAAAGTATATT	NA	False	NA	17	True	NA	NA	NA	83567348	83588696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.8	chr12	+	3136	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.6199554809036	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTTCTAATTTTGCCA	NA	False	NA	8	True	NA	NA	NA	83567352	83588687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83568638_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8013.9	chr12	+	4747	12	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-48	9	intron_retention	FALSE	canonical	1	5	junction_3	96.0108464946961	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAGTATATTATGTGGA	NA	False	NA	24	True	NA	NA	NA	83567359	83588703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576759_83576909_83577597_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ES.8014.1	chr12	-	206	1	Intergenic	novelGene_6627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCCCCCACCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	83576389	83576183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83576200_83576400
ES.8015.1	chr12	-	2644	1	Antisense	novelGene_ENSMUSG00000021222.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-44	NA	83579363	83576719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83576700_83579400
ES.8016.1	chr12	+	168	1	Intergenic	novelGene_6629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	83618166	83618334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83618200_83618300
ES.8017.1	chr12	+	180	1	Intergenic	novelGene_6630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCAG	1108	False	NA	NA	False	NA	NA	NA	83633694	83633874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83633700_83633900
ES.8018.1	chr12	+	176	1	Intergenic	novelGene_6632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	4429	False	NA	NA	False	NA	NA	NA	83637015	83637191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83637000_83637200
ES.8019.1	chr12	+	175	1	Intergenic	novelGene_6634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAATATCTGA	1089	False	NA	NA	False	NA	NA	NA	83652395	83652570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83652400_83652600
ES.8019.2	chr12	+	459	1	Intergenic	novelGene_6635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAAATAAAAAAT	1093	False	NA	NA	False	NA	NA	NA	83652399	83652858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83652400_83652900
ES.802.1	chr1	+	3202	11	NIC	ENSMUSG00000026207.17	novel	3393	11	NA	NA	2	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	1.46969384566991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGTGTGCTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	75358771	75381207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75358819_75359780_75359824_75361299_75361390_75361471_75361632_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ES.802.2	chr1	+	3406	12	NIC	ENSMUSG00000026207.17	novel	3393	11	NA	NA	3	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	1.43163779527487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTAGTGTGCTGTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	75358772	75381205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75358819_75359780_75359824_75360682_75360713_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ES.802.3	chr1	+	3373	11	FSM	ENSMUSG00000026207.17	ENSMUST00000113590.8	3393	11	20	0	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	1.56204993518133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGTGTGCTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	75358777	75381207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75358819_75359780_75359824_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ES.802.4	chr1	+	3229	12	NIC	ENSMUSG00000026207.17	novel	3393	11	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	1.33608531424537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTGTGCTGTGTCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	75358780	75381208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75358819_75359780_75359824_75360677_75360713_75361299_75361390_75361471_75361632_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ES.802.5	chr1	+	2876	7	ISM	ENSMUSG00000026207.17	ENSMUST00000113590.8	3393	11	5670	0	2174	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGTGTGCTGTGTCTTC	2371	False	NA	NA	False	AATAAA	-16	NA	75364427	75381207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ES.8020.1	chr12	+	5029	1	Genic_Genomic	ENSMUSG00000010608.16	novel	NA	NA	NA	NA	-4880	-7993	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATTATCCATAAGTT	283	False	NA	NA	False	NA	NA	NA	83673129	83678158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_83673100_83678200
ES.8020.10	chr12	+	4505	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-39	-48	intron_retention	FALSE	canonical	3	13	junction_16	169.921604866933	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	3942	False	NA	4	True	ATTAAA	-15	NA	83678986	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.101	chr12	+	4142	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-8	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	144.242775885178	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGAGATGCTTTCTTTG	4012	False	NA	5	True	ATTAAA	-16	NA	83679056	83729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710758_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.102	chr12	+	3167	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-7	-104	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	176.15592524806	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGAATTCTACTTAC	4013	False	NA	6	True	ATTAAA	-16	NA	83679057	83728690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.103	chr12	+	4502	23	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-6	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	200.653519058958	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	4014	False	NA	17	True	AATAAA	-17	NA	83679058	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83709945_83710007_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.104	chr12	+	4388	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-5	-48	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	179.710967239153	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4015	False	NA	4	True	ATTAAA	-15	NA	83679059	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.105	chr12	+	2871	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-7	-411	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	190.648303192565	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTACATTTCAGATTTC	4028	False	NA	NA	False	AGTAAA	-14	NA	83679072	83728383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83682175_83682256_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.106	chr12	+	4608	19	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	7	-1	intron_retention	FALSE	canonical	3	90	junction_2	147.888805409443	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTGTAGTGCATAT	4042	False	NA	12	True	AATAAA	-12	NA	83679086	83729896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.108	chr12	+	4329	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	10	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.872027644288	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4045	False	NA	4	True	ATTAAA	-15	NA	83679089	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685046_83685080_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.109	chr12	+	4550	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-5	1	intron_retention	FALSE	canonical	3	13	junction_6	176.091691884135	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	4050	False	NA	14	True	AATAAA	-14	NA	83679094	83729898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698112_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.11	chr12	+	3106	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-39	1159	-39	-56	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAATAAGTTGAATACTA	3942	False	NA	54	True	ATTAAA	-22	NA	83678986	83728738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.110	chr12	+	4476	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	8	-48	intron_retention	FALSE	canonical	3	212	junction_1	112.345549495071	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4063	False	NA	4	True	ATTAAA	-15	NA	83679107	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.111	chr12	+	9760	20	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	1693	2	intron_retention	FALSE	canonical	0	0	junction_1	177.139521203765	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	251	False	NA	15	True	AATAAA	-15	NA	83683236	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83683864_83684312_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.112	chr12	+	2029	2	NNC	ENSMUSG00000010608.16	novel	548	4	NA	NA	3578	1035	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTCCAGAATAAATTTTA	2136	False	NA	8	True	ATTAAA	-17	NA	83685121	83730932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83686457_83730238
ES.8020.113	chr12	+	6059	18	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	8330	48	-1972	-48	3prime_fragment	FALSE	canonical	3	244	junction_8	94.4039762226338	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4370	False	NA	4	True	ATTAAA	-15	NA	83687355	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.114	chr12	+	3135	18	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	10101	1201	-201	-98	3prime_fragment	FALSE	canonical	3	244	junction_8	94.4039762226338	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTACTTACTATTAA	577	False	NA	12	True	ATTAAA	-22	NA	83689126	83728696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.115	chr12	+	6073	15	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-45	135	intron_retention	FALSE	canonical	3	149	junction_6	118.67639501895	769	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGGCTCCCTTAAAC	4361	False	NA	15	True	TATAAA	-19	NA	83692910	83728929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.116	chr12	+	5469	15	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	76	1755	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	158.970540204974	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGTTGCAGGTTTTTC	4482	False	NA	NA	False	AATAAA	-13	NA	83693031	83731652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.117	chr12	+	5720	14	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-67	-109	intron_retention	FALSE	canonical	3	13	junction_1	150.513794606554	762	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	6459	False	NA	1	True	ATTAAA	-11	NA	83695008	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83695030_83698112_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.118	chr12	+	5656	13	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	2983	-58	intron_retention	FALSE	canonical	3	149	junction_4	124.913970395629	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAATAAGTTGAATAC	9509	False	NA	52	True	ATTAAA	-20	NA	83698058	83728736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.119	chr12	+	6409	14	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	2983	-48	intron_retention	FALSE	non_canonical	0	0	junction_10	211.592133051375	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	9509	False	NA	4	True	ATTAAA	-15	NA	83698058	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83698219_83706196_83706401_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721440_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.12	chr12	+	3415	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-37	129	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGGTGGGCTCCC	3944	False	NA	9	True	TATAAA	-13	NA	83678988	83728923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.120	chr12	+	5997	12	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	3119	-109	intron_retention	FALSE	canonical	3	368	junction_1	78.0428998364107	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	9645	False	NA	1	True	ATTAAA	-11	NA	83698194	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.121	chr12	+	3707	16	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	3345	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	221.733674082721	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	9871	False	NA	4	True	ATTAAA	-15	NA	83698420	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708188_83708273_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.122	chr12	+	4214	14	NNC	ENSMUSG00000010608.16	novel	518	4	NA	NA	-2087	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.057074263755	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	NA	False	NA	4	True	ATTAAA	-15	NA	83703211	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83703969_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.123	chr12	+	5824	3	ISM	ENSMUSG00000010608.16	ENSMUST00000182255.8	4672	10	14561	4468	-1265	16	internal_fragment	FALSE	canonical	3	443	junction_1	5.5	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGGAAATTGAGAAAGAA	NA	False	NA	5	True	NA	NA	NA	83704033	83710789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83706383_83707081_83707136_83707368
ES.8020.124	chr12	+	8683	12	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-976	4	intron_retention	FALSE	canonical	3	443	junction_1	65.75272988708	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	NA	False	NA	17	True	AATAAA	-17	NA	83704322	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.125	chr12	+	6486	11	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	385	-109	intron_retention	FALSE	canonical	3	443	junction_1	66.6682083155082	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	NA	False	NA	1	True	ATTAAA	-11	NA	83705683	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.126	chr12	+	3967	13	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	16274	-1055	388	-48	3prime_fragment	FALSE	canonical	3	244	junction_3	98.9434462486301	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	NA	False	NA	4	True	ATTAAA	-15	NA	83705686	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.127	chr12	+	6544	13	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	633	2	intron_retention	FALSE	canonical	3	149	junction_3	120.36481005676	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	NA	False	NA	15	True	AATAAA	-15	NA	83705931	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.128	chr12	+	3568	14	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	897	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_4	156.595585872632	776	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	NA	False	NA	13	True	AATAAA	-13	NA	83706195	83729897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.129	chr12	+	4450	13	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	16869	-2133	983	1030	3prime_fragment	FALSE	canonical	3	244	junction_3	98.9434462486301	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTTGACTCCAGAATAAA	NA	False	NA	3	True	ATTAAA	-12	NA	83706281	83730927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.13	chr12	+	3458	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-36	130	combination_of_known_junctions	TRUE	canonical	3	11	junction_8	187.665200556736	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTGGTGGGCTCCCT	3945	False	NA	10	True	TATAAA	-14	NA	83678989	83728924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.130	chr12	+	6716	10	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	1871	-48	intron_retention	FALSE	canonical	3	445	junction_1	62.3047072315558	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	NA	False	NA	4	True	ATTAAA	-15	NA	83707169	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.131	chr12	+	4786	9	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-1732	-407	intron_retention	FALSE	canonical	3	445	junction_1	60.7901102153961	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTCAGATTTCTTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	83708017	83728387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.132	chr12	+	5594	10	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-1459	-47	intron_retention	FALSE	canonical	0	0	junction_4	178.814063025822	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGAGATGCTTTCTTTG	NA	False	NA	5	True	ATTAAA	-16	NA	83708290	83729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718760_83719513_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.133	chr12	+	4505	11	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-1454	-104	intron_retention	FALSE	canonical	2	7	junction_6	220.706501943192	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGAATTCTACTTAC	NA	False	NA	6	True	ATTAAA	-16	NA	83708295	83728690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721589_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.135	chr12	+	4683	10	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-541	-44	intron_retention	FALSE	non_canonical	0	0	junction_2	180.588612358532	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATGCTTTCTTTGAGT	NA	False	NA	8	True	ATTAAA	-19	NA	83709208	83729853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83711034_83714865_83715083_83715190_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.136	chr12	+	6398	8	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	786	-109	intron_retention	FALSE	canonical	3	473	junction_1	50.978987267865	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	NA	False	NA	1	True	ATTAAA	-11	NA	83710535	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.137	chr12	+	5369	8	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	1162	-107	intron_retention	FALSE	canonical	3	3	junction_5	198.894085238494	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTGCAGAATTCTACT	NA	False	NA	3	True	ATTAAA	-13	NA	83710911	83728687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83722855_83722955_83724628_83724677_83728276
ES.8020.138	chr12	+	2806	10	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	1165	-45	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	180.13821853726	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGATGCTTTCTTTGAG	NA	False	NA	7	True	ATTAAA	-18	NA	83710914	83729852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83710922_83714921_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.139	chr12	+	4984	8	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	3364	-48	intron_retention	FALSE	canonical	3	473	junction_1	50.978987267865	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	NA	False	NA	4	True	ATTAAA	-15	NA	83713113	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.14	chr12	+	4322	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-30	2	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3951	False	NA	15	True	AATAAA	-15	NA	83678995	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.140	chr12	+	3067	7	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	5441	2	intron_retention	FALSE	canonical	3	514	junction_1	39.9235380307017	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	NA	False	NA	15	True	AATAAA	-15	NA	83715190	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.141	chr12	+	3589	4	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	-1766	-48	intron_retention	FALSE	canonical	3	542	junction_1	37.3928097663471	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	NA	False	NA	4	True	ATTAAA	-15	NA	83719532	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83719659_83721112_83722955_83724628_83724677_83728276
ES.8020.142	chr12	+	2370	5	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	31699	-1104	-187	1	3prime_fragment	FALSE	canonical	3	467	junction_1	63.3048181420656	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	NA	False	NA	14	True	AATAAA	-14	NA	83721111	83729898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.143	chr12	+	1794	2	ISM	ENSMUSG00000010608.16	ENSMUST00000182450.8	2994	18	34441	-453	2227	453	3prime_fragment	FALSE	canonical	3	608	junction_1	0	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGGGGAGGAGCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	83723853	83729247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83724677_83728276
ES.8020.15	chr12	+	4826	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-29	-1	intron_retention	FALSE	canonical	3	13	junction_7	200.507506093912	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTGTAGTGCATAT	3952	False	NA	12	True	AATAAA	-12	NA	83678996	83729896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698112_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.16	chr12	+	4259	9	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-29	19260	-29	-136	5prime_fragment	FALSE	canonical	3	212	junction_1	75.2462623656484	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAAATCCTGGTGGTTT	3952	False	NA	NA	False	AAAAAG	-4	NA	83678996	83710637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368
ES.8020.17	chr12	+	2925	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	-289	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTGATGCTCTGTG	3954	False	NA	NA	False	NA	NA	NA	83678998	83728505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.18	chr12	+	7553	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	4	intron_retention	FALSE	canonical	2	11	junction_1	187.556691337243	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	3954	False	NA	17	True	AATAAA	-17	NA	83678998	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83682175_83682256_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.19	chr12	+	3800	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	208	intron_retention	FALSE	canonical	3	93	junction_10	145.998689322715	772	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCTAGGATAATTACG	3954	False	NA	88	True	CATAAA	-26	NA	83678998	83729002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.2	chr12	+	6014	21	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	1	-53	intron_retention	FALSE	canonical	0	0	junction_1	185.892065457351	768	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGTTGAATACTAGTC	2966	False	NA	57	True	ATTAAA	-25	NA	83678010	83728741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83678131_83678242_83678397_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.20	chr12	+	4317	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	2	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3954	False	NA	15	True	AATAAA	-15	NA	83678998	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.21	chr12	+	3487	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	-105	intron_retention	FALSE	canonical	3	93	junction_10	145.998689322715	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCAGAATTCTACTTA	3954	False	NA	5	True	ATTAAA	-15	NA	83678998	83728689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.22	chr12	+	4373	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	2	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	158.146798805095	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3954	False	NA	15	True	AATAAA	-15	NA	83678998	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.23	chr12	+	6655	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-27	205	intron_retention	FALSE	canonical	3	212	junction_1	99.1063180818308	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATACCTAGGATAATT	3954	False	NA	85	True	CATAAA	-23	NA	83678998	83728999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.24	chr12	+	3105	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-25	-105	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGCAGAATTCTACTTA	3956	False	NA	5	True	ATTAAA	-15	NA	83679000	83728689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.25	chr12	+	4197	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-25	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	148.327423935556	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	3956	False	NA	4	True	ATTAAA	-15	NA	83679000	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719513_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.26	chr12	+	4376	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3957	False	NA	13	True	AATAAA	-13	NA	83679001	83729897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.27	chr12	+	4431	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-21	2	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3960	False	NA	15	True	AATAAA	-15	NA	83679004	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.28	chr12	+	3259	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	-65	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCGCCAACATGAATAAGT	3962	False	NA	45	True	ATTAAA	-13	NA	83679006	83728729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.29	chr12	+	4393	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	177.998342688914	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	3962	False	NA	17	True	AATAAA	-17	NA	83679006	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83682175_83682256_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.3	chr12	+	4214	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	2	455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	171.67244245947	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGGGGAGGAGCTCACT	2967	False	NA	NA	False	AATAAA	-19	NA	83678011	83729249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83678131_83678242_83678397_83678662_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.30	chr12	+	6163	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	1753	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	201.079486770779	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATGGTTGCAGGTTTT	3962	False	NA	NA	False	AATAAA	-11	NA	83679006	83731650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718760_83719513_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.31	chr12	+	7462	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-19	1	intron_retention	FALSE	canonical	3	90	junction_2	155.906360389423	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3962	False	NA	14	True	AATAAA	-14	NA	83679006	83729898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.32	chr12	+	6196	18	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-18	-97	intron_retention	FALSE	canonical	3	149	junction_9	124.445343820554	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTACTTACTATTAAA	3963	False	NA	13	True	ATTAAA	-23	NA	83679007	83728697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.33	chr12	+	3340	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-18	135	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGGCTCCCTTAAAC	3963	False	NA	15	True	TATAAA	-19	NA	83679007	83728929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.34	chr12	+	7925	17	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-18	1	intron_retention	FALSE	canonical	3	212	junction_1	102.155442219198	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	3963	False	NA	14	True	AATAAA	-14	NA	83679007	83729898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.35	chr12	+	6332	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-18	-109	intron_retention	FALSE	canonical	3	212	junction_1	99.1063180818308	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	3963	False	NA	1	True	ATTAAA	-11	NA	83679007	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.36	chr12	+	3200	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-18	-59	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	158.146798805095	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACATGAATAAGTTGAATA	3963	False	NA	51	True	ATTAAA	-19	NA	83679007	83728735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.37	chr12	+	5852	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-17	-60	intron_retention	FALSE	canonical	3	149	junction_9	121.001377402628	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACATGAATAAGTTGAAT	3964	False	NA	50	True	ATTAAA	-18	NA	83679008	83728734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.38	chr12	+	3929	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-17	-311	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_8	148.053387518002	777	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTTGAAAAGTACCAAG	3964	False	NA	NA	False	AAGAAA	-45	NA	83679008	83729586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707371_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.39	chr12	+	3268	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-14	972	-14	131	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGGTGGGCTCCCTT	3967	False	NA	11	True	TATAAA	-15	NA	83679011	83728925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.4	chr12	+	6131	20	NNC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	2	129	intron_retention	FALSE	canonical	0	0	junction_1	176.230977244979	773	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGGTGGGCTCCC	2967	False	NA	9	True	TATAAA	-13	NA	83678011	83728923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83678131_83678242_83678397_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.40	chr12	+	4407	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	186.386822227324	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3969	False	NA	15	True	AATAAA	-15	NA	83679013	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.41	chr12	+	4682	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-12	2	intron_retention	FALSE	canonical	3	93	junction_10	145.998689322715	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3969	False	NA	15	True	AATAAA	-15	NA	83679013	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.42	chr12	+	2786	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-11	-410	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACATTTCAGATTTCT	3970	False	NA	NA	False	AGTAAA	-15	NA	83679014	83728384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.44	chr12	+	7324	18	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-10	-48	intron_retention	FALSE	non_canonical	0	0	junction_2	163.248001625141	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	3971	False	NA	4	True	ATTAAA	-15	NA	83679015	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689514_83691178_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.45	chr12	+	7652	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-10	2	intron_retention	FALSE	non_canonical	0	0	junction_7	172.703985671051	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3971	False	NA	15	True	AATAAA	-15	NA	83679015	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706187_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.47	chr12	+	4146	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	143.497505032726	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	3972	False	NA	4	True	ATTAAA	-15	NA	83679016	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722914_83724628_83724677_83728276
ES.8020.48	chr12	+	7153	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	2	intron_retention	FALSE	canonical	2	11	junction_1	183.43458643342	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3972	False	NA	15	True	AATAAA	-15	NA	83679016	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83682175_83682256_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.49	chr12	+	3531	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-58	intron_retention	FALSE	canonical	3	11	junction_8	211.271799449502	766	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGAATAAGTTGAATAC	3972	False	NA	52	True	ATTAAA	-20	NA	83679016	83728736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.5	chr12	+	4169	19	NIC	ENSMUSG00000010608.16	novel	2994	18	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	141.560450377608	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	2979	False	NA	15	True	AATAAA	-15	NA	83678023	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83678131_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.50	chr12	+	4315	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-42	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	201.592166668375	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCTTTCTTTGAGTCT	3972	False	NA	10	True	ATTAAA	-21	NA	83679016	83729855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.51	chr12	+	4538	23	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-46	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	206.058830763297	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAGATGCTTTCTTTGA	3972	False	NA	6	True	ATTAAA	-17	NA	83679016	83729851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.53	chr12	+	5864	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-104	intron_retention	FALSE	canonical	3	90	junction_2	152.043021320973	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGAATTCTACTTAC	3972	False	NA	6	True	ATTAAA	-16	NA	83679016	83728690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.54	chr12	+	4981	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	191.349746860514	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTCTTTTGCAGAATTC	3972	False	NA	-1	True	ATTAAA	-9	NA	83679016	83728683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708172_83710007_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.55	chr12	+	3106	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	-90	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTATTAAAACTGTAT	3972	False	NA	20	True	ATTAAA	-30	NA	83679016	83728704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.56	chr12	+	8037	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-9	4	intron_retention	FALSE	canonical	3	7	junction_1	160.731803955434	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	3972	False	NA	17	True	AATAAA	-17	NA	83679016	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.57	chr12	+	7182	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-8	-50	intron_retention	FALSE	canonical	3	13	junction_15	156.999842730125	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGGAGATGCTTTCT	3973	False	NA	2	True	ATTAAA	-13	NA	83679017	83729847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.58	chr12	+	4432	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_17	198.463462712274	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3975	False	NA	13	True	AATAAA	-13	NA	83679019	83729897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721589_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.59	chr12	+	7066	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	90	junction_2	152.043021320973	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTGTGTAGTGCATA	3975	False	NA	11	True	AATAAA	-11	NA	83679019	83729895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.6	chr12	+	3204	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-53	-98	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTACTTACTATTAA	3928	False	NA	12	True	ATTAAA	-22	NA	83678972	83728696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.60	chr12	+	2836	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	1	-411	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTACATTTCAGATTTC	3983	False	NA	NA	False	AGTAAA	-14	NA	83679027	83728383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.61	chr12	+	3312	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	1	129	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGGTGGGCTCCC	3983	False	NA	9	True	TATAAA	-13	NA	83679027	83728923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.62	chr12	+	6095	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	2	-103	intron_retention	FALSE	canonical	0	0	junction_17	213.292810777231	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAATTCTACTTACT	3984	False	NA	7	True	ATTAAA	-17	NA	83679028	83728691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721093_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.63	chr12	+	4356	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	187.290576377991	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3989	False	NA	15	True	AATAAA	-15	NA	83679033	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721589_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.64	chr12	+	7096	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	6	4	intron_retention	FALSE	canonical	3	11	junction_7	177.625146082348	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	3992	False	NA	17	True	AATAAA	-17	NA	83679036	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.65	chr12	+	6420	19	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	7	-109	intron_retention	FALSE	canonical	3	7	junction_1	156.381497753111	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTTTGCAGAATTCTA	3993	False	NA	1	True	ATTAAA	-11	NA	83679037	83728685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.66	chr12	+	7634	19	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	7	2	intron_retention	FALSE	canonical	3	7	junction_1	156.381497753111	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3993	False	NA	15	True	AATAAA	-15	NA	83679037	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.67	chr12	+	4174	19	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	7	-50	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	177.263631525839	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGGAGATGCTTTCT	3993	False	NA	2	True	ATTAAA	-13	NA	83679037	83729847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.68	chr12	+	3628	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	8	-106	intron_retention	FALSE	canonical	3	38	junction_2	183.352502028197	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCAGAATTCTACTT	3994	False	NA	4	True	ATTAAA	-14	NA	83679038	83728688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.69	chr12	+	6293	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	9	411	intron_retention	FALSE	non_canonical	0	0	junction_17	151.447460636794	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCATATTCATTTT	3995	False	NA	NA	False	AATATA	-21	NA	83679039	83729205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722956_83724628_83724677_83728276
ES.8020.7	chr12	+	7055	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-53	4	intron_retention	FALSE	canonical	3	149	junction_9	121.001377402628	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	3928	False	NA	17	True	AATAAA	-17	NA	83678972	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.70	chr12	+	4349	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	9	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	184.062788200114	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATGCTTTCTTTGAGTC	3995	False	NA	9	True	ATTAAA	-20	NA	83679039	83729854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718760_83719513_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.71	chr12	+	4730	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	9	-44	intron_retention	FALSE	canonical	3	38	junction_2	168.656381644016	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATGCTTTCTTTGAGT	3995	False	NA	8	True	ATTAAA	-19	NA	83679039	83729853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.72	chr12	+	6920	17	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	11	133	intron_retention	FALSE	canonical	3	212	junction_1	102.155442219198	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTGGGCTCCCTTAA	3997	False	NA	13	True	TATAAA	-17	NA	83679041	83728927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.73	chr12	+	4654	19	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	12	-53	intron_retention	FALSE	canonical	3	7	junction_1	162.178314072984	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATCTTGGAGATGCTT	3998	False	NA	-1	True	ATTAAA	-10	NA	83679042	83729844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.74	chr12	+	7188	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	12	-47	intron_retention	FALSE	non_canonical	0	0	junction_20	207.900039210806	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGAGATGCTTTCTTTG	3998	False	NA	5	True	ATTAAA	-16	NA	83679042	83729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721589_83721664_83721817_83722093_83722855_83722953_83724628_83724677_83728276
ES.8020.75	chr12	+	4593	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	12	-50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	194.8451097155	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGGAGATGCTTTCT	3998	False	NA	2	True	ATTAAA	-13	NA	83679042	83729847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83681733_83682024_83682175_83682256_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.76	chr12	+	4342	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	13	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	189.460780902011	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	3999	False	NA	4	True	ATTAAA	-15	NA	83679043	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707978_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.78	chr12	+	4506	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	18	-298	13	298	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTCTCTGTTTAGCC	3999	False	NA	NA	False	NA	NA	NA	83679043	83730195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.79	chr12	+	7221	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	14	-48	intron_retention	FALSE	canonical	3	13	junction_16	177.412535510411	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4000	False	NA	4	True	ATTAAA	-15	NA	83679044	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.8	chr12	+	3480	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-40	135	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGGCTCCCTTAAAC	3941	False	NA	15	True	TATAAA	-19	NA	83678985	83728929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.80	chr12	+	5560	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	14	-409	intron_retention	FALSE	canonical	1	6	junction_15	179.270466828779	761	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACATTTCAGATTTCTT	4000	False	NA	NA	False	AGTAAA	-16	NA	83679044	83728385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721570_83721664_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.81	chr12	+	4469	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	190.691699512691	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	4000	False	NA	13	True	AATAAA	-13	NA	83679044	83729897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83682175_83682256_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.82	chr12	+	4109	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	14	-44	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	154.889356647796	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATGCTTTCTTTGAGT	4000	False	NA	8	True	ATTAAA	-19	NA	83679044	83729853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.83	chr12	+	4182	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	14	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.560450377608	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGAGATGCTTTCTTTG	4000	False	NA	5	True	ATTAAA	-16	NA	83679044	83729850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679214_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.84	chr12	+	3255	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	17	-90	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	179.710967239153	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTATTAAAACTGTAT	4003	False	NA	20	True	ATTAAA	-30	NA	83679047	83728704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.85	chr12	+	4431	22	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-15	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	199.060970160576	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	4005	False	NA	15	True	AATAAA	-15	NA	83679049	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698521_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.86	chr12	+	2896	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-15	-111	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	147.241242114774	764	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTCTTTTGCAGAATTC	4005	False	NA	-1	True	ATTAAA	-9	NA	83679049	83728683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719544_83719635_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.87	chr12	+	5022	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-15	1033	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_16	170.1539245057	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACTCCAGAATAAATTT	4005	False	NA	6	True	ATTAAA	-15	NA	83679049	83730930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83722855_83722955_83724628_83724677_83728276
ES.8020.88	chr12	+	6492	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-14	453	intron_retention	FALSE	canonical	3	11	junction_8	192.532049280113	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGGGGAGGAGCTCA	4006	False	NA	NA	False	AATAAA	-17	NA	83679050	83729247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.89	chr12	+	7128	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-14	-48	intron_retention	FALSE	non_canonical	0	0	junction_1	182.120125192138	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4006	False	NA	4	True	ATTAAA	-15	NA	83679050	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685880_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.9	chr12	+	4267	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	-39	-2	-39	2	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTAGTGCATATACT	3942	False	NA	15	True	AATAAA	-15	NA	83678986	83729899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.90	chr12	+	3676	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-14	411	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	186.386822227324	775	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGGCATATTCATTTT	4006	False	NA	NA	False	AATATA	-21	NA	83679050	83729205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83698419_83698525_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.91	chr12	+	7453	18	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-14	-48	intron_retention	FALSE	canonical	3	212	junction_1	99.1063180818308	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGAGATGCTTTCTTT	4006	False	NA	4	True	ATTAAA	-15	NA	83679050	83729849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.92	chr12	+	7357	18	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-14	4	intron_retention	FALSE	canonical	3	149	junction_9	124.445343820554	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTGCATATACTAG	4006	False	NA	17	True	AATAAA	-17	NA	83679050	83729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.94	chr12	+	4330	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-13	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	178.533995362228	778	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGCTTTCTTTGAGTCT	4007	False	NA	10	True	ATTAAA	-21	NA	83679051	83729855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83686918_83687027_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.95	chr12	+	5932	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-13	129	intron_retention	FALSE	canonical	0	0	junction_11	174.972712158211	771	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGGTGGGCTCCC	4007	False	NA	9	True	TATAAA	-13	NA	83679051	83728923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708172_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.97	chr12	+	3728	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-12	450	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTGGGGGGAGGAGC	4008	False	NA	NA	False	AATAAA	-14	NA	83679052	83729244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8020.99	chr12	+	2986	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	-8	-288	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTTGATGCTCTGTGT	4012	False	NA	NA	False	NA	NA	NA	83679056	83728506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ES.8021.1	chr12	-	4198	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9285	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTGGCTCGTTTTT	NA	False	NA	5	True	TATAAA	-21	NA	83653281	83593326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.10	chr12	-	4050	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	-9	-5	-9	5	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	83644005	83593617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.11	chr12	-	3034	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9251	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.7147422058064	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	83653247	83593617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83609123_83609210_83615622_83615838_83621405_83621911_83653189
ES.8021.12	chr12	-	5667	3	NNC	ENSMUSG00000042628.9	novel	375	3	NA	NA	-1476	5	intron_retention	TRUE	non_canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	6517	False	NA	NA	False	AAAAAG	-5	NA	83599955	83593617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83596428_83596925_83598584_83598756
ES.8021.16	chr12	-	3925	12	Fusion	ENSMUSG00000042628.9_ENSMUSG00000099708.2	novel	4036	12	NA	NA	1321	3	multi-exon	FALSE	canonical	0	0	junction_11	37.1632538674499	277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATCGTATGGATCATG	NA	False	NA	NA	False	AAAAAG	-3	NA	83679286	83593619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83679174
ES.8021.17	chr12	-	3211	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9278	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.9967170737389	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATCGTATGGATCATG	NA	False	NA	NA	False	AAAAAG	-3	NA	83653274	83593619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651466_83651581_83651973_83652098_83653189
ES.8021.18	chr12	-	3068	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9249	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATCGTATGGATCATG	NA	False	NA	NA	False	AAAAAG	-3	NA	83653245	83593619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652098_83653189
ES.8021.19	chr12	-	3103	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9409	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.7479031690748	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCATCGTATGGATCAT	NA	False	NA	NA	False	AAAAAG	-2	NA	83653405	83593620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83653189
ES.8021.2	chr12	-	3265	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9280	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	38.7479031690748	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTGTGTTGGCTCGTT	NA	False	NA	2	True	TATAAA	-18	NA	83653276	83593329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83653189
ES.8021.20	chr12	-	3890	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9271	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCATCGTATGGATCAT	NA	False	NA	NA	False	AAAAAG	-2	NA	83653267	83593620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.21	chr12	-	4063	4	ISM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	42348	-2	-3169	2	3prime_fragment	FALSE	canonical	3	123	junction_2	2.62466929133727	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCATCGTATGGATCAT	4824	False	NA	NA	False	AAAAAG	-2	NA	83601648	83593620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149
ES.8021.22	chr12	-	4150	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	52	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.4765292890427	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCATCGTATGGATCAT	NA	False	NA	NA	False	AAAAAG	-2	NA	83643944	83593620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643177_83643342_83643770
ES.8021.23	chr12	-	3096	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9286	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCCATCGTATGGATCAT	NA	False	NA	NA	False	AAAAAG	-2	NA	83653282	83593620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652090_83653189
ES.8021.24	chr12	-	2998	11	Fusion	ENSMUSG00000042628.9_ENSMUSG00000099708.2	novel	4036	12	NA	NA	1321	1	multi-exon	FALSE	canonical	0	0	junction_10	38.7479031690748	277	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCATCGTATGGATCA	NA	False	NA	NA	False	AAAAAG	-1	NA	83679286	83593621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83679174
ES.8021.25	chr12	-	3838	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9242	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	37.1632538674499	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83653238	83593622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642093_83653206
ES.8021.26	chr12	-	4003	13	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9272	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	46.7519310355792	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83653268	83593622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83651466_83651581_83653189
ES.8021.27	chr12	-	4222	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83643930	83593622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643518
ES.8021.28	chr12	-	4088	13	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-8	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	49.0201205855537	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAAAAGCTTGGC	NA	False	NA	NA	False	NA	NA	NA	83643896	83593635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83605670_83605836_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.29	chr12	-	3932	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9234	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	47.4765292890427	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTTAAAAAGCTTGGC	NA	False	NA	NA	False	NA	NA	NA	83653230	83593635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83652586_83652681_83653189
ES.8021.3	chr12	-	4464	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	15	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	41.9330438352531	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTGTGTTGGCTCGTT	NA	False	NA	2	True	TATAAA	-18	NA	83643981	83593329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641021_83642097_83643770
ES.8021.31	chr12	-	3932	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9242	-31	intron_retention	FALSE	canonical	0	0	junction_10	38.6016839010943	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	83653238	83593653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.32	chr12	-	5081	11	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	11	-31	intron_retention	FALSE	non_canonical	0	0	junction_2	43.1375706316431	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	83643985	83593653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83598584_83598756_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.35	chr12	-	3114	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9264	-76	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	54.9967170737389	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGGTTCTTACAAGA	NA	False	NA	NA	False	NA	NA	NA	83653260	83593698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651466_83651581_83651973_83652090_83653185
ES.8021.36	chr12	-	4409	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-23	-98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.4724841569535	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAGATCATGAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	83643911	83593720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598584_83598756_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.37	chr12	-	3778	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9260	-99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAGATCATGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	83653256	83593721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.38	chr12	-	1921	4	NNC	ENSMUSG00000042628.9	novel	375	3	NA	NA	-597	-110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	58.4541605780879	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATTTCAACAGAT	7396	False	NA	NA	False	NA	NA	NA	83599076	83593732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598253_83598584_83598756
ES.8021.39	chr12	-	3806	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	119	111	11	-111	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATTTCAACAGA	NA	False	NA	NA	False	NA	NA	NA	83643877	83593733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.4	chr12	-	3403	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9253	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.7147422058064	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTGTGTTGGCTCGTT	NA	False	NA	2	True	TATAAA	-18	NA	83653249	83593329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83605670_83605836_83615622_83615838_83621405_83621911_83653189
ES.8021.40	chr12	-	3102	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9251	480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATCTCCATTTATCC	NA	False	NA	NA	False	AATAAA	-12	NA	83653247	83594388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.41	chr12	-	2945	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9234	216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.8675629757385	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCCTCTCCGACTGCTT	NA	False	NA	0	True	AATAAA	-23	NA	83653230	83594652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83651973_83652098_83653189
ES.8021.42	chr12	-	2955	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	51	1030	51	216	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCCTCTCCGACTGCTT	NA	False	NA	0	True	AATAAA	-23	NA	83643945	83594652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.43	chr12	-	2037	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9251	216	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCCTCTCCGACTGCTT	NA	False	NA	0	True	AATAAA	-23	NA	83653247	83594652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652098_83653189
ES.8021.44	chr12	-	2173	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9249	210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	55.4263149495697	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGTTCCCTCTCCGA	NA	False	NA	-6	True	AATAAA	-17	NA	83653245	83594658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83628017_83628162_83651973_83652098_83653189
ES.8021.45	chr12	-	2914	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-43	210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	41.4212386133547	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGTTCCCTCTCCGA	NA	False	NA	-6	True	AATAAA	-17	NA	83643931	83594658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601845_83601969_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.46	chr12	-	2831	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9250	210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.1632538674499	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGTTCCCTCTCCGA	NA	False	NA	-6	True	AATAAA	-17	NA	83653246	83594658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.47	chr12	-	4149	5	NNC	ENSMUSG00000042628.9	novel	465	2	NA	NA	-9249	-10999	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.8973079528621	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	83653245	83610184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83610286_83613275_83615838_83621405_83621911_83641171_83642097_83653189
ES.8021.48	chr12	-	181	1	Intergenic	novelGene_6628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTTGCCTTGG	NA	False	NA	NA	False	NA	NA	NA	83610365	83610184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83610200_83610400
ES.8021.49	chr12	-	6372	4	ISM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	2	17497	2	-11934	5prime_fragment	FALSE	canonical	3	46	junction_3	36.2981481009094	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGGTTTGGTTGTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	83643994	83611119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.5	chr12	-	4346	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	-19	-291	-19	0	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACAGCTGTGTTGGCTCG	NA	False	NA	0	True	TATAAA	-16	NA	83644015	83593331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ES.8021.50	chr12	-	3520	3	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9462	-13906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	67	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGCTCAGTGAACAGT	NA	False	NA	NA	False	NA	NA	NA	83653458	83613091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83615838_83621405_83621911_83653189
ES.8021.51	chr12	-	3585	5	NNC	ENSMUSG00000042628.9	novel	465	2	NA	NA	22	-13930	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.8973079528621	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83643866	83613115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83614142_83615056_83615838_83621405_83621911_83641171_83642097_83643518
ES.8021.52	chr12	-	2435	3	ISM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	25	26979	25	17508	5prime_fragment	FALSE	canonical	3	46	junction_2	27.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTTTCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	83643971	83620601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_83621911_83641171_83642097_83643770
ES.8021.53	chr12	-	161	1	Intergenic	novelGene_6631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83636322	83636161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83636200_83636300
ES.8021.54	chr12	-	171	1	Intergenic	novelGene_6633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGGA	NA	False	NA	NA	False	NA	NA	NA	83649896	83649725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83649700_83649900
ES.8021.55	chr12	-	160	1	Intergenic	novelGene_6636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATATTTAA	5506	False	NA	NA	False	NA	NA	NA	83662985	83662825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83662800_83663000
ES.8021.56	chr12	-	170	1	Intergenic	novelGene_6637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAATCAGGATAAA	2947	False	NA	NA	False	NA	NA	NA	83665544	83665374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83665400_83665500
ES.8021.57	chr12	-	2693	2	Genic_Genomic	ENSMUSG00000099708.2	novel	2000	1	NA	NA	1776	8920	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	83678831	83669687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_83671757_83678207
ES.8021.7	chr12	-	3350	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9245	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACAGCTGTGTTGGCT	NA	False	NA	-2	True	TATAAA	-14	NA	83653241	83593333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652098_83653189
ES.8021.8	chr12	-	3346	12	NNC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	-9249	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	47.7081346910826	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACAGCTGTGTTGGCT	NA	False	NA	-2	True	TATAAA	-14	NA	83653245	83593333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83651973_83652090_83653189
ES.8021.9	chr12	-	4002	13	NNC	ENSMUSG00000042628.9	novel	4420	13	NA	NA	-9256	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	45.8675629757385	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCGTATGGATCATGAC	NA	False	NA	NA	False	AAAAAG	-5	NA	83653252	83593617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83651973_83652098_83653189
ES.8022.1	chr12	-	1060	2	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	3	53	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	83682687	83681409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83681690_83681907
ES.8022.2	chr12	-	2903	1	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATTAAAAAATATAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	83684605	83681702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83681700_83684600
ES.8022.3	chr12	-	2514	2	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CATTAAAAAATATAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	83684605	83681702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83683976_83684364
ES.8023.1	chr12	-	3280	5	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGAAATAAGTTGGTA	NA	False	NA	NA	False	NA	NA	NA	83699777	83688239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83689522_83691170_83691221_83692905_83693079_83694971_83695028_83698058
ES.8023.2	chr12	-	4761	1	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGCTGAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	83693005	83688244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83688200_83693000
ES.8023.3	chr12	-	2361	5	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCTGAAATAA	NA	False	NA	NA	False	NA	NA	NA	83698873	83688246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83689522_83691170_83691221_83692905_83693072_83694972_83695028_83698058
ES.8023.4	chr12	-	208	2	Antisense	novelGene_ENSMUSG00000010608.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATACTTTGAATCTAAC	NA	False	NA	NA	False	NA	NA	NA	83694136	83693727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_83693767_83693967
ES.8023.5	chr12	-	174	1	Intergenic	novelGene_6638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83694136	83693962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83694000_83694100
ES.8024.1	chr12	-	2206	1	Intergenic	novelGene_6639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCAATAGATAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	83704754	83702548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83702500_83704800
ES.8025.1	chr12	-	1911	1	Intergenic	novelGene_6640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCGATGTGTCTGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	83732070	83730159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83730200_83732100
ES.8026.1	chr12	+	2709	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	-19	0	-19	0	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3326	False	NA	9	True	ATTAAA	-20	NA	83734906	83781869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.10	chr12	+	2570	12	NIC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	7	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	93.4648915390866	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCGCTCTCTGTCCTGG	3372	False	NA	5	True	ATTAAA	-16	NA	83734952	83781865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83735068_83746128_83746196_83746374_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.12	chr12	+	1514	11	ISM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	31	3268	-5	2618	5prime_fragment	FALSE	canonical	3	287	junction_9	22.4919985772719	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGCATACCTTTATGG	3376	False	NA	NA	False	NA	NA	NA	83734956	83778601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447
ES.8026.13	chr12	+	5905	12	NIC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	8	3244	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	93.4648915390866	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGTGCTTGTTTTCTT	3389	False	NA	0	True	AATAAA	-13	NA	83734969	83785217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_83735068_83746128_83746196_83746374_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.14	chr12	+	4747	11	ISM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	64	2	28	-2	intron_retention	FALSE	canonical	3	287	junction_9	22.4919985772719	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTCTCTGTCCTGGCT	3409	False	NA	7	True	ATTAAA	-18	NA	83734989	83781867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447
ES.8026.16	chr12	+	2546	11	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	10790	108	10790	-4	3prime_fragment	FALSE	canonical	3	287	junction_8	20.3086188599816	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCGCTCTCTGTCCTGG	NA	False	NA	5	True	ATTAAA	-16	NA	83746126	83781865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.18	chr12	+	175	1	Intergenic	novelGene_6642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGGTATTTTTATGT	NA	False	NA	NA	False	NA	NA	NA	83760340	83760515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83760300_83760500
ES.8026.2	chr12	+	6052	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	-11	-3351	-11	3247	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGCTTGTTTTCTTCCA	3334	False	NA	3	True	AATAAA	-16	NA	83734914	83785220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.3	chr12	+	2383	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	2	305	2	-305	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCCCTGTCATCCTTA	3347	False	NA	NA	False	NA	NA	NA	83734927	83781564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.4	chr12	+	2089	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	5	596	5	-596	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTTACTGTCCAGGAGG	3350	False	NA	NA	False	AATAAA	-15	NA	83734930	83781273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.7	chr12	+	2653	12	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.3037770361457	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCGCTCTCTGTCCTGG	3371	False	NA	5	True	ATTAAA	-16	NA	83734951	83781865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83735068_83746135_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ES.8026.8	chr12	+	4386	10	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	135.786960955138	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTCTCTGTCCTGGCT	3371	False	NA	7	True	ATTAAA	-18	NA	83734951	83781867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83735068_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83780128_83780319
ES.8026.9	chr12	+	4595	12	NNC	ENSMUSG00000019969.15	novel	2690	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.7680945019852	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3371	False	NA	9	True	ATTAAA	-20	NA	83734951	83781869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83780128_83780319
ES.8027.1	chr12	-	176	1	Intergenic	novelGene_6641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTCACCGACACAG	NA	False	NA	NA	False	NA	NA	NA	83748375	83748199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83748200_83748400
ES.8028.1	chr12	-	174	1	Intergenic	novelGene_6643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATGCAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	83780323	83780149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83780100_83780300
ES.8029.1	chr12	-	190	1	Intergenic	novelGene_6644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	7340	False	NA	NA	False	NA	NA	NA	83812604	83812414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83812400_83812600
ES.803.1	chr1	-	177	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAGAA	7700	False	NA	NA	False	NA	NA	NA	75367316	75367139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75367100_75367300
ES.8030.1	chr12	+	7015	2	Antisense	novelGene_ENSMUSG00000021224.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAGGCCAGCAT	NA	False	NA	NA	False	NA	NA	NA	83898851	83905928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_83901650_83901711
ES.8031.1	chr12	+	7783	1	Intergenic	novelGene_6648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATTCTGAATAGTTTCA	NA	False	NA	NA	False	ACTAAA	-1	NA	83932333	83940116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_83932300_83940100
ES.8032.1	chr12	-	3501	11	FSM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	48	0	-3	0	multi-exon	FALSE	canonical	3	42	junction_6	36.1696004954437	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATAGTTCTGTTTTTA	NA	False	NA	0	True	NA	NA	NA	83968660	83840807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.10	chr12	-	3622	13	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	44.559806876701	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968664	83840812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83873958_83873986_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.11	chr12	-	3749	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	30	-3	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	39.6778348516196	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968588	83840812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968413
ES.8032.13	chr12	-	3504	12	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.0816337978293	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	False	NA	-5	True	NA	NA	NA	83968678	83840812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83847976_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.15	chr12	-	3788	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	22	-5	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	35.311313893551	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGGGTTTATAGTTCT	NA	False	NA	-7	True	AATAAA	-44	NA	83968596	83840814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968413
ES.8032.16	chr12	-	3875	14	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	43.8922834263461	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAATGGGTTTATAGTTC	NA	False	NA	-8	True	AATAAA	-43	NA	83968661	83840815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83865954_83866156_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.17	chr12	-	3170	9	NNC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	-2	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.9603992419996	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTGTTCTTATTTGCA	NA	False	NA	-24	True	AATAAA	-27	NA	83968659	83840831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850669_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.18	chr12	-	3665	12	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	39.0437347488748	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGGCTGTTCTTATTT	NA	False	NA	-27	True	AATAAA	-24	NA	83968678	83840834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858150_83878684_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.19	chr12	-	3481	12	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	7	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	44.1711547176538	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAAGGGCTGTTCTTATT	NA	False	NA	-28	True	AATAAA	-23	NA	83968650	83840835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848072_83850553_83850759_83854880_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.2	chr12	-	3623	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATAGTTCTGTTTTTA	NA	False	NA	0	True	NA	NA	NA	83968687	83840807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.21	chr12	-	3588	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_11	39.0371723674536	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968573	83840844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968413
ES.8032.23	chr12	-	3712	13	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	46.7511140687221	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGCCCATGAAGGGC	NA	False	NA	-38	True	AATAAA	-13	NA	83968675	83840845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83865954_83866156_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.25	chr12	-	3474	10	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	39.3163805274313	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTGCCCATGAAGGGC	NA	False	NA	-38	True	AATAAA	-13	NA	83968684	83840845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.26	chr12	-	3609	13	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	42.9795655580132	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTTGCCCATGAAGGG	NA	False	NA	-39	True	AATAAA	-12	NA	83968614	83840846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83926765_83926864_83968591
ES.8032.27	chr12	-	3518	12	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	48.1155633658854	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTTGCCCATGAAGG	NA	False	NA	-40	True	AATAAA	-11	NA	83968642	83840847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83875813_83875941_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.29	chr12	-	3568	11	NNC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	46.8445300969067	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTTTTGCCCATGAAG	NA	False	NA	-41	True	AATAAA	-10	NA	83968599	83840848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848072_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968413
ES.8032.3	chr12	-	3588	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968687	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.30	chr12	-	3563	12	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	34.6042561754265	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGCTTTTGCCCATGAA	NA	False	NA	-42	True	AATAAA	-9	NA	83968678	83840849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848072_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.31	chr12	-	3248	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-18	-333	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGCAGGCTATTGTGTCG	NA	False	NA	NA	False	NA	NA	NA	83968682	83841177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.32	chr12	-	2884	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	18	578	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATCTTTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	83968690	83841634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.33	chr12	-	2646	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-20	578	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAATCTTTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	83968684	83841634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.34	chr12	-	2585	10	NIC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	3	573	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	34.4383507154451	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCAAAATCTTTATT	NA	False	NA	NA	False	NA	NA	NA	83968661	83841639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.35	chr12	-	2758	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	18	570	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAAAGCCAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	83968690	83841642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.36	chr12	-	2762	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	3	570	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAAAGCCAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	83968661	83841642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.37	chr12	-	2407	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-6	343	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	30.5779332198891	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATCTCCCTTTATTT	NA	False	NA	NA	False	TATAAA	-15	NA	83923590	83841869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441
ES.8032.38	chr12	-	1786	5	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	38424	-339	38424	339	3prime_fragment	FALSE	canonical	3	100	junction_1	7.44983221287567	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAACAATCTCCCTTT	NA	False	NA	NA	False	TATAAA	-11	NA	83850693	83841873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553
ES.8032.39	chr12	-	2208	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-9	4	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGACAGGTGTTTTC	NA	False	NA	NA	False	AATAGA	-12	NA	83968673	83842208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.4	chr12	-	3674	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	30.4074262351803	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968688	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.40	chr12	-	216	1	Intergenic	novelGene_6645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGATATGAGCCAATT	NA	False	NA	NA	False	NA	NA	NA	83890851	83890635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83890600_83890900
ES.8032.41	chr12	-	198	1	Intergenic	novelGene_6646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCCATGTCTATAATTC	7026	False	NA	NA	False	NA	NA	NA	83914879	83914681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83914700_83914900
ES.8032.42	chr12	-	3812	1	Intergenic	novelGene_6647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTGTGAAGCAATC	NA	False	NA	NA	False	NA	NA	NA	83932526	83928714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83928700_83932500
ES.8032.43	chr12	-	3943	1	Intergenic	novelGene_6649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAACTCTTTATCAGAA	7992	False	NA	NA	False	NA	NA	NA	83948073	83944130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83944100_83948100
ES.8032.5	chr12	-	3551	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	30.7224310332864	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968679	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8032.6	chr12	-	3456	11	NNC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	39.6863956539265	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968678	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_83842929_83846281_83846432_83847786_83848072_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.7	chr12	-	3465	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968678	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.8	chr12	-	3382	10	NIC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	34.4383507154451	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968628	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
ES.8032.9	chr12	-	3705	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968686	83840809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ES.8033.1	chr12	-	175	1	Intergenic	novelGene_6650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAGTA	655	False	NA	NA	False	NA	NA	NA	83984197	83984022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_83984000_83984200
ES.8034.1	chr12	+	2308	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	38	-2	38	2	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTCTAAGCCTAGAT	4013	False	NA	19	True	ATTAAA	-23	NA	83997419	83999727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_83997400_83999700
ES.8035.1	chr12	-	548	2	FSM	ENSMUSG00000096953.3	ENSMUST00000223215.2	591	2	45	-2	32	2	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTACTATTATTATTAT	NA	False	NA	NA	False	GATAAA	-14	NA	83997582	83991988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_83992340_83997385
ES.8036.1	chr12	+	176	1	Intergenic	novelGene_6651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGATTTATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	84005344	84005520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84005300_84005500
ES.8037.1	chr12	+	2392	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	-196	0	-196	0	multi-exon	FALSE	canonical	3	74	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATGTTGTCCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	84034438	84040647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84035256_84037267_84037471_84039275
ES.8037.2	chr12	+	1735	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	357	104	357	-104	multi-exon	FALSE	canonical	3	74	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-13	NA	84034991	84040543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84035256_84037267_84037471_84039275
ES.8037.3	chr12	+	1488	2	NNC	ENSMUSG00000021226.8	novel	2196	3	NA	NA	4332	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATGTTGTCCTTCCT	555	False	NA	NA	False	AATAAA	-19	NA	84038966	84040647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84039083_84039275
ES.8038.1	chr12	-	174	1	Intergenic	novelGene_6652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAACAAAACT	NA	False	NA	NA	False	NA	NA	NA	84044818	84044644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84044600_84044800
ES.8039.1	chr12	+	1587	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	0	685	0	12	multi-exon	FALSE	canonical	3	130	junction_1	2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTCCTTCAATCT	2819	False	NA	23	True	AATAAA	-34	NA	84056263	84064460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84056741_84061152_84061356_84063553
ES.8039.2	chr12	+	1281	3	NIC	ENSMUSG00000072949.7	novel	2272	3	NA	NA	5	12	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	57	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTCCTTCAATCT	2824	False	NA	23	True	AATAAA	-34	NA	84056268	84064460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84056741_84061152_84061356_84063854
ES.8039.4	chr12	+	1573	3	NNC	ENSMUSG00000072949.7	novel	2272	3	NA	NA	7	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGTCCTTCAATCT	2826	False	NA	23	True	AATAAA	-34	NA	84056270	84064460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84056741_84061152_84061356_84063560
ES.8039.6	chr12	+	1570	3	NNC	ENSMUSG00000072949.7	novel	2272	3	NA	NA	9	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	67	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAATTGTGTCCTTCAAT	2828	False	NA	21	True	AATAAA	-32	NA	84056272	84064458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84056741_84061158_84061356_84063553
ES.804.1	chr1	-	177	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAATGATGTCAC	NA	False	NA	NA	False	NA	NA	NA	75388804	75388627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75388600_75388800
ES.8040.1	chr12	-	159	1	Intergenic	novelGene_6653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	84068014	84067855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84067900_84068000
ES.8041.1	chr12	-	168	1	Intergenic	novelGene_6654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	84069205	84069037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84069000_84069200
ES.8042.1	chr12	+	1298	3	NNC	ENSMUSG00000052392.6	novel	6203	3	NA	NA	-12783	795	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGTGGTAGTTGCAGC	3002	False	NA	NA	False	ATTAAA	-26	NA	84072369	84090836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84072593_84088610_84088814_84089964
ES.8042.2	chr12	+	2158	3	FSM	ENSMUSG00000052392.6	ENSMUST00000021652.5	6203	3	-11	4056	-11	1278	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGTCACTTGGAGCC	88	False	NA	NA	False	NA	NA	NA	84085141	84091319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84085742_84088610_84088814_84089964
ES.8043.1	chr12	+	3771	2	ISM	ENSMUSG00000021228.16	ENSMUST00000021653.8	3431	4	1508	6	563	-6	intron_retention	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACATGTCTTGTTTCCTT	NA	False	NA	NA	False	AATAAA	-14	NA	84100432	84107170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84100716_84103682
ES.8043.2	chr12	+	1614	3	ISM	ENSMUSG00000021228.16	ENSMUST00000120927.8	1854	4	1527	5	575	-5	3prime_fragment	FALSE	canonical	2	7	junction_1	2	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACATCTGTGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	84100444	84106334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84100716_84103682_84103886_84105194
ES.8043.3	chr12	+	2338	3	ISM	ENSMUSG00000021228.16	ENSMUST00000021653.8	3431	4	1634	4	689	-4	3prime_fragment	FALSE	canonical	2	7	junction_1	2	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTCTTGTTTCCTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	84100558	84107172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84100716_84103682_84103886_84105194
ES.8044.1	chr12	-	2485	3	NNC	ENSMUSG00000097762.2	novel	2932	3	NA	NA	-34	11036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATTTGTCTTGACTTC	NA	False	NA	NA	False	NA	NA	NA	84100615	84075206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84077168_84087315_84087494_84100269
ES.8044.2	chr12	-	107	1	ISM	ENSMUSG00000097762.2	ENSMUST00000180751.2	2932	3	12921	1311	12921	-1311	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTGGTTGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	84087660	84087553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_84087600_84087700
ES.8045.1	chr12	-	158	1	Intergenic	novelGene_6655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	1481	False	NA	NA	False	NA	NA	NA	84146993	84146835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84146800_84147000
ES.8046.1	chr12	+	3284	3	FSM	ENSMUSG00000043487.5	ENSMUST00000056822.4	3388	3	109	-5	-69	5	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTGCTGCTGTTGTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	84147536	84158128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84148203_84153216_84153420_84155713
ES.8047.1	chr12	+	3324	8	NNC	ENSMUSG00000042523.13	novel	5727	8	NA	NA	-61	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.47443953921409	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAAGTCCTTTG	9851	False	NA	NA	False	AATAAA	-15	NA	84161078	84190282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183418_84187588
ES.8047.2	chr12	+	721	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	-9	5015	-9	45	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACATCTCTCACTTCC	9903	False	NA	NA	False	TTTAAA	-28	NA	84161130	84185276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
ES.8047.3	chr12	+	5718	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	9	0	4	0	multi-exon	FALSE	canonical	2	7	junction_1	4.44007721940573	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCTTTGGTTACTGTA	9921	False	NA	NA	False	AATAAA	-24	NA	84161148	84190291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
ES.8047.4	chr12	+	2993	9	NIC	ENSMUSG00000042523.13	novel	3021	9	NA	NA	6	2017	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	7.82224392358101	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACAGACTGTCAAGGC	9923	False	NA	NA	False	AATAAA	-41	NA	84161150	84196289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84161174_84168056_84168096_84171248_84171359_84173304_84173345_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84193888
ES.8047.5	chr12	+	5875	3	NIC	ENSMUSG00000042523.13	novel	403	6	NA	NA	-5621	640	intron_retention	FALSE	canonical	3	16	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	84168056	84181398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84168096_84171248_84173792_84178105
ES.8048.1	chr12	+	184	1	Intergenic	novelGene_6657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGTAACAAC	7919	False	NA	NA	False	NA	NA	NA	84214892	84215076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84214900_84215100
ES.8049.1	chr12	+	155	1	Intergenic	novelGene_6658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGGAC	8547	False	NA	NA	False	NA	NA	NA	84215520	84215675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84215500_84215700
ES.805.1	chr1	-	281	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCCCTGGATTGTTCC	NA	False	NA	NA	False	GGGGCT	-44	NA	75402314	75402033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75402000_75402300
ES.8050.1	chr12	+	1541	1	Antisense	novelGene_ENSMUSG00000042507.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84217639	84219180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84217600_84219200
ES.8051.1	chr12	+	3766	1	Antisense	novelGene_ENSMUSG00000113776.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCAGTTCTTGGCAAGA	1830	False	NA	NA	False	AAAAAG	-8	NA	84228495	84232261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84228500_84232300
ES.8052.1	chr12	+	3209	2	NNC	ENSMUSG00000113052.2	novel	684	2	NA	NA	-2720	-2667	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGTTGAATTGTATG	3441	False	NA	NA	False	TTTAAA	-6	NA	84240022	84243687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84241969_84242424
ES.8052.2	chr12	+	2035	3	NNC	ENSMUSG00000113052.2	novel	684	2	NA	NA	-1803	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAATCGTAATTTA	4358	False	NA	NA	False	AATAAA	-14	NA	84240939	84246358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84241969_84242424_84243187_84246114
ES.8052.3	chr12	+	1700	3	NNC	ENSMUSG00000113052.2	novel	684	2	NA	NA	-1547	-2675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTCTTCCAAAGTTGA	4614	False	NA	NA	False	NA	NA	NA	84241195	84243679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84241969_84242424_84243187_84243514
ES.8053.1	chr12	-	6970	13	FSM	ENSMUSG00000042507.16	ENSMUST00000046266.13	6848	13	-96	-26	-96	26	multi-exon	TRUE	canonical	3	40	junction_12	22.3288241716596	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATAGGGGTGTTTTT	NA	False	NA	15	True	ATTAAA	-36	NA	84265751	84195923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ES.8053.10	chr12	-	4364	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-172	2964	-172	217	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGCAGGATCCAGTTCT	NA	False	NA	2	True	AATAAA	-39	NA	84240961	84199015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.11	chr12	-	3840	13	NNC	ENSMUSG00000042507.16	novel	6848	13	NA	NA	3041	213	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	31.4857772123647	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGCTGCAGGATCCAG	NA	False	NA	-2	True	AATAAA	-35	NA	84237748	84199019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84237579
ES.8053.12	chr12	-	3790	13	NNC	ENSMUSG00000042507.16	novel	6848	13	NA	NA	4444	212	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	31.2418878359736	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGGGCTGCAGGATCCA	134	False	NA	-3	True	AATAAA	-34	NA	84236345	84199020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84236225
ES.8053.13	chr12	-	4042	13	FSM	ENSMUSG00000042507.16	ENSMUST00000220974.2	3565	13	-266	-211	-266	211	multi-exon	FALSE	canonical	3	40	junction_12	22.3288241716596	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGGGCTGCAGGATCC	NA	False	NA	-4	True	AATAAA	-33	NA	84265921	84199021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ES.8053.14	chr12	-	4485	1	NIC	ENSMUSG00000042507.16	novel	6848	13	NA	NA	1697	-1012	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84205215	84200730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84200700_84205200
ES.8053.15	chr12	-	184	1	Intergenic	novelGene_6656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATGGCCCTGTGGC	NA	False	NA	NA	False	GATAAA	-6	NA	84201167	84200983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84201000_84201200
ES.8053.3	chr12	-	7321	13	NNC	ENSMUSG00000042507.16	novel	6848	13	NA	NA	-46	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.6008991533778	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAATACCACAT	NA	False	NA	-3	True	ATTAAA	-18	NA	84265701	84195941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84204609_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ES.8053.4	chr12	-	7361	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-95	-110	-95	8	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAATACCACAT	NA	False	NA	-3	True	ATTAAA	-18	NA	84240884	84195941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.5	chr12	-	7093	12	NIC	ENSMUSG00000042507.16	novel	7156	13	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.6951862911281	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCATTGTTGAA	NA	False	NA	-11	True	ATTAAA	-10	NA	84240837	84195949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84199336_84199608_84199806_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.6	chr12	-	6877	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-96	375	-96	-375	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCACATTTGGCTGTGT	NA	False	NA	NA	False	TATAAA	-13	NA	84240885	84196426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.7	chr12	-	5608	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	3	1545	3	-1545	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGACTATTGGGTATT	NA	False	NA	NA	False	AATAGA	-20	NA	84240786	84197596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.8	chr12	-	5044	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	-41	2153	-41	1028	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTTGTCATTTGGGAA	NA	False	NA	NA	False	NA	NA	NA	84240830	84198204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ES.8053.9	chr12	-	4594	13	FSM	ENSMUSG00000042507.16	ENSMUST00000220974.2	3565	13	-2	-1027	-2	1027	multi-exon	FALSE	canonical	3	40	junction_12	22.3288241716596	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTGTCATTTGGGA	NA	False	NA	NA	False	NA	NA	NA	84265657	84198205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ES.8054.1	chr12	+	153	1	Intergenic	novelGene_6659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATATTAA	NA	False	NA	NA	False	NA	NA	NA	84272037	84272190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84272000_84272200
ES.8055.1	chr12	-	4125	1	Intergenic	novelGene_6660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84282514	84278389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84278400_84282500
ES.8055.2	chr12	-	3821	1	Intergenic	novelGene_6661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCTTTGCTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	84282509	84278688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84278700_84282500
ES.8056.1	chr12	+	188	1	Intergenic	novelGene_6663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATCACGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	84284583	84284771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84284600_84284800
ES.8057.1	chr12	+	177	1	Intergenic	novelGene_6667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2536	False	NA	NA	False	NA	NA	NA	84319660	84319837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84319700_84319800
ES.8058.1	chr12	+	3102	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	65	1	65	-1	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGACCACTTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84332070	84362605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.10	chr12	+	2016	9	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	84.3782406785067	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTGAGAAGCAGTTAA	NA	False	NA	NA	False	AATAAA	-14	NA	84332139	84361628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84360710
ES.8058.12	chr12	+	1294	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	4	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.1736857858803	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATCTTTCTGTACA	NA	False	NA	7	True	NA	NA	NA	84332142	84360855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332265_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.13	chr12	+	3087	10	FSM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	-37	-977	4	-1	multi-exon	FALSE	canonical	3	10	junction_1	74.1401742114137	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGACCACTTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84332142	84362605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332308_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.14	chr12	+	1125	7	NNC	ENSMUSG00000072946.13	novel	1869	9	NA	NA	4	-405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	94.2415631354989	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAAGCTCAATATTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84332142	84354801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352898_84354549
ES.8058.15	chr12	+	2780	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	137	251	4	-251	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGATGAAAGTGAGTCG	NA	False	NA	NA	False	TATAAA	-15	NA	84332142	84362355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.16	chr12	+	1228	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	4	1030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.432091252239	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTGTTCAACACATGG	NA	False	NA	0	True	AATAAA	-12	NA	84332142	84357757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84335215_84335284_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692
ES.8058.17	chr12	+	2054	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	79.043510443362	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGGTGAGAAGCAGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	84332142	84361627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355116_84355207_84357692_84357733_84360710
ES.8058.18	chr12	+	1235	9	NIC	ENSMUSG00000072946.13	novel	1286	10	NA	NA	0	-21	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	84.3782406785067	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATCTTTCTGTACA	NA	False	NA	7	True	NA	NA	NA	84332147	84360855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84360710
ES.8058.19	chr12	+	1213	9	ISM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	-29	3867	3	1034	5prime_fragment	FALSE	canonical	3	10	junction_1	78.5668505159778	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCAACACATGGAGTG	NA	False	NA	4	True	AATAAA	-16	NA	84332150	84357761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84332308_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692
ES.8058.2	chr12	+	1118	9	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	-22	1	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	79.7941688032403	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTGATTCTAGTGTG	NA	False	NA	29	True	TTTAAA	-20	NA	84332116	84360877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.20	chr12	+	657	5	ISM	ENSMUSG00000072946.13	ENSMUST00000138733.8	2424	6	12	5789	3	-132	5prime_fragment	FALSE	canonical	3	9	junction_3	129.10267231936	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAATTCTGCATCTG	NA	False	NA	NA	False	TATAAA	-16	NA	84332150	84345008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84343001_84343131_84344784
ES.8058.21	chr12	+	3212	11	NNC	ENSMUSG00000072946.13	novel	1386	11	NA	NA	3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.7837279711833	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTATGACCACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84332150	84362602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84334680_84334874_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.22	chr12	+	3147	11	FSM	ENSMUSG00000072946.13	ENSMUST00000123693.2	1386	11	-35	-1726	-3	-4	multi-exon	FALSE	canonical	3	9	junction_3	94.1679881913169	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTATGACCACTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84332151	84362602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84343001_84343131_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.23	chr12	+	4378	12	NNC	ENSMUSG00000072946.13	novel	1386	11	NA	NA	-2	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.218784588313	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTATGACCACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84332152	84362601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84333499_84334794_84335215_84335284_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.26	chr12	+	1334	10	FSM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	-5	744	1	8	multi-exon	FALSE	canonical	3	10	junction_1	74.1401742114137	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCTAGTGTGATAATAT	NA	False	NA	36	True	TTTAAA	-27	NA	84332174	84360884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332308_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.27	chr12	+	5552	9	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	2	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	106.633425810109	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGACCACTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84332175	84362603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84354549_84354672_84355118_84355207_84357692_84359026_84359236
ES.8058.28	chr12	+	1309	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	-1	100	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	100.154325362856	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGAGTTCTCAAGCT	NA	False	NA	128	True	NA	NA	NA	84332178	84360976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349062_84349182_84352699_84352906_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.29	chr12	+	4961	2	NIC	ENSMUSG00000072946.13	novel	656	4	NA	NA	5306	-12	intron_retention	FALSE	canonical	3	254	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGGAAAGCCTTTGT	NA	False	NA	NA	False	TATAAA	-33	NA	84337492	84345128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84342110_84344784
ES.8058.3	chr12	+	1425	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	112	1631	-21	99	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATACAGGAGTTCTCAAGC	NA	False	NA	127	True	NA	NA	NA	84332117	84360975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.30	chr12	+	2967	9	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	8582	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.5894740213805	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTTATGACCACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	84340768	84362601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84340903_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.31	chr12	+	6220	5	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	9720	1041	intron_retention	FALSE	canonical	3	217	junction_4	15.1739909054935	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATGGAGTGGGTTTTC	NA	False	NA	11	True	AATAAA	-23	NA	84341906	84357768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84342110_84344784_84344977_84349010_84354672_84355118_84355207_84357692
ES.8058.4	chr12	+	1153	7	ISM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	-20	1925	-11	-404	5prime_fragment	FALSE	canonical	3	204	junction_5	24.1827532666476	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAGCTCAATATTTAAA	NA	False	NA	NA	False	AATAAA	-19	NA	84332127	84354802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549
ES.8058.5	chr12	+	1437	11	FSM	ENSMUSG00000072946.13	ENSMUST00000123693.2	1386	11	-51	0	-3	0	multi-exon	FALSE	canonical	3	9	junction_3	94.1679881913169	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTCTTGATTCTAGTGT	NA	False	NA	28	True	TTTAAA	-19	NA	84332135	84360876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84343001_84343131_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.6	chr12	+	1891	9	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	-3	2	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	82.8657611743234	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGAGAAGCAGTTAACA	NA	False	NA	NA	False	AATAAA	-16	NA	84332135	84361630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ES.8058.7	chr12	+	2989	10	NNC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	99.6058900534167	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGACCACTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84332138	84362603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84332210_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355120_84355207_84357692_84357733_84360710
ES.8058.8	chr12	+	2992	9	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	84.3782406785067	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTATGACCACTTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84332138	84362603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84360710
ES.8058.9	chr12	+	2244	5	NIC	ENSMUSG00000072946.13	novel	3168	10	NA	NA	1	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	111.401021090473	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGACTTATGACCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	84332139	84362599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84332251_84339057_84339143_84341990_84342110_84357692_84357733_84360710
ES.8059.1	chr12	+	2269	11	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	81.0434451390117	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1600	False	NA	11	True	AATAAA	-16	NA	84363642	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363820_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.10	chr12	+	2536	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	75.9171240381393	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCTCTTGTTTTAGA	1850	False	NA	14	True	AATAAA	-19	NA	84363892	84390500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
ES.8059.11	chr12	+	4780	9	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	10	junction_1	64.7895632027258	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	1850	False	NA	12	True	AATAAA	-17	NA	84363892	84390498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875
ES.8059.12	chr12	+	4590	13	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	91.0458904435926	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCTCTTGTTTTAGA	1851	False	NA	14	True	AATAAA	-19	NA	84363893	84390500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376961_84377162_84377639_84377864_84379595_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.13	chr12	+	2267	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.2166303403607	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1856	False	NA	11	True	AATAAA	-16	NA	84363898	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378534_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.14	chr12	+	2346	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	91.2527142130012	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1857	False	NA	11	True	AATAAA	-16	NA	84363899	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363949_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
ES.8059.15	chr12	+	2362	13	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.5003494052419	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1857	False	NA	11	True	AATAAA	-16	NA	84363899	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84377414_84377483_84378437_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.16	chr12	+	2561	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	86.489361902041	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1857	False	NA	11	True	AATAAA	-16	NA	84363899	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
ES.8059.17	chr12	+	2340	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCACCTCTTTGGCTCTT	1870	False	NA	6	True	AATAAA	-11	NA	84363912	84390492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.18	chr12	+	3589	8	ISM	ENSMUSG00000042472.12	ENSMUST00000220931.2	1569	9	19	4	1	-4	intron_retention	FALSE	canonical	3	183	junction_3	13.3294211947764	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGGGCTTGTTGGTTTT	1877	False	NA	NA	False	AATAAA	-10	NA	84363919	84382208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708
ES.8059.19	chr12	+	4890	11	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	4205	0	intron_retention	FALSE	non_canonical	0	0	junction_5	85.1838599735889	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	6081	False	NA	11	True	AATAAA	-16	NA	84368123	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376961_84377162_84377639_84377864_84378591_84379708_84379799_84384389_84385557_84386875_84387004_84389768
ES.8059.2	chr12	+	2358	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	241	-2	-22	2	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTCTTGTTTTAG	1824	False	NA	13	True	AATAAA	-18	NA	84363866	84390499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.20	chr12	+	1250	7	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-1943	6848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	77.8088826691543	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGAGACCTCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	84376606	84397345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84396882
ES.8059.21	chr12	+	6543	2	ISM	ENSMUSG00000042472.12	ENSMUST00000222606.2	2284	12	15467	-10	270	7	intron_retention	FALSE	canonical	3	201	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGTTTTAGATTGG	NA	False	NA	18	True	AATAAA	-23	NA	84379370	84390504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84379799_84384389
ES.8059.22	chr12	+	5557	4	ISM	ENSMUSG00000042472.12	ENSMUST00000222471.2	889	5	5750	-273	-48	7	3prime_fragment	FALSE	canonical	3	202	junction_1	25.2498624858742	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTTGTTTTAGATTGG	NA	False	NA	18	True	AATAAA	-23	NA	84379963	84390504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.23	chr12	+	6049	2	FSM	ENSMUSG00000042472.12	ENSMUST00000221867.2	841	2	-1075	-4133	-1075	744	multi-exon	FALSE	canonical	3	205	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGCATACTTTCTGGGC	NA	False	NA	NA	False	AAGAAA	-8	NA	84383873	84391241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84385557_84386875
ES.8059.3	chr12	+	2556	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-17	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	77.4279234729521	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTTTGGCTCTTGTT	1829	False	NA	9	True	AATAAA	-14	NA	84363871	84390495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363949_84366628_84366836_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.4	chr12	+	2447	13	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	96.6732756361458	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1840	False	NA	11	True	AATAAA	-16	NA	84363882	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363949_84366628_84366836_84368585_84368766_84369657_84369794_84372344_84372564_84372636_84372719_84374052_84374245_84376575_84376727_84378408_84378537_84379708_84379799_84384389_84384516_84385415_84385557_84389768
ES.8059.5	chr12	+	2323	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	82.712486191027	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACCTCTTTGGCTCTTGTT	1843	False	NA	9	True	AATAAA	-14	NA	84363885	84390495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84363949_84368585_84368766_84369664_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386880_84387004_84389768
ES.8059.6	chr12	+	4421	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	266	-2090	0	2090	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGCTTATAAATTA	1849	False	NA	NA	False	NA	NA	NA	84363891	84392587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.7	chr12	+	3075	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	266	-744	0	744	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGCATACTTTCTGGGC	1849	False	NA	NA	False	AAGAAA	-8	NA	84363891	84391241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.8059.8	chr12	+	7505	8	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	10	junction_1	74.1038983799236	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1850	False	NA	11	True	AATAAA	-16	NA	84363892	84390497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84385557_84386875_84387004_84389768
ES.8059.9	chr12	+	3081	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	1	716	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAGAAAGAA	1850	False	NA	NA	False	NA	NA	NA	84363892	84391213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ES.806.1	chr1	+	2613	8	ISM	ENSMUSG00000026207.17	ENSMUST00000137868.8	9885	39	41664	34	3764	-34	3prime_fragment	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAAACAAAAC	2921	False	NA	NA	False	NA	NA	NA	75403917	75408914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75404081_75404254_75404423_75404535_75405116_75405703_75405944_75406040_75406265_75407082_75407159_75407440_75407591_75407902
ES.8060.1	chr12	+	1604	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	-1	-1	-1	1	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTTTCCTCTTCTGAT	NA	False	NA	18	True	AATAAA	-18	NA	84408740	84420571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.10	chr12	+	2004	10	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	-3	0	intron_retention	FALSE	canonical	2	7	junction_2	72.0971566707037	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGTGTCTCTTTTCC	NA	False	NA	9	True	AATAAA	-9	NA	84408809	84420562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84415359_84415484_84417029_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.11	chr12	+	1344	10	NIC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	73.0227429480317	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408810	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.12	chr12	+	3047	10	NIC	ENSMUSG00000021235.14	novel	1583	12	NA	NA	0	2	intron_retention	FALSE	canonical	2	3	junction_5	93.075569986947	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408812	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84415484_84417029_84417129_84417697_84417806_84417881_84417945_84418177_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.13	chr12	+	1904	11	NNC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	1	2	intron_retention	FALSE	canonical	1	1	junction_4	70.2524020941633	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408813	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84409012_84413658_84413794_84414916_84415484_84417029_84417157_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.14	chr12	+	5264	5	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	0	2	intron_retention	FALSE	canonical	2	2	junction_2	105.729312397272	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408816	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84418333_84419192_84419309_84419424_84419592_84420452
ES.8060.15	chr12	+	2146	10	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	0	2	intron_retention	FALSE	canonical	3	20	junction_5	68.8569818581768	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408816	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417129_84417697_84417806_84417881_84417945_84418224_84419309_84419424_84419592_84420452
ES.8060.16	chr12	+	2261	9	NNC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_3	116.126480076682	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408819	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84409012_84413658_84413794_84415359_84415484_84416130_84416232_84417029_84417129_84417697_84417945_84418224_84419309_84419424_84419592_84420452
ES.8060.17	chr12	+	1522	12	NNC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	68.1752724130607	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408820	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419603_84420458
ES.8060.18	chr12	+	1785	10	ISM	ENSMUSG00000021235.14	ENSMUST00000150391.8	2056	11	4920	-2	-1463	2	3prime_fragment	FALSE	canonical	3	205	junction_4	17.8664455486594	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	2575	False	NA	11	True	AATAAA	-11	NA	84413736	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84413794_84414916_84414976_84415359_84415484_84417029_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.19	chr12	+	1918	4	NIC	ENSMUSG00000021235.14	novel	2851	8	NA	NA	-183	2	intron_retention	FALSE	canonical	3	224	junction_3	21.013223349966	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	279	False	NA	11	True	AATAAA	-11	NA	84417592	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.2	chr12	+	1542	12	NIC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	-6	2	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	62.6245535772017	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408763	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417129_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.20	chr12	+	1378	3	NIC	ENSMUSG00000021235.14	novel	2851	8	NA	NA	434	2	intron_retention	FALSE	canonical	3	224	junction_2	23	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	896	False	NA	11	True	AATAAA	-11	NA	84418209	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84419309_84419424_84419592_84420452
ES.8060.3	chr12	+	1508	11	NIC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	1	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	69.5125887879311	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTTTTCCTCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84408770	84420568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.4	chr12	+	1754	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	39	-191	11	191	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTATATAATTATCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	84408780	84420761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.5	chr12	+	1569	12	NNC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	67.9148713616253	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTTTTCCTCTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84408790	84420568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417679_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.6	chr12	+	1531	12	NNC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	68.1101441456204	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408791	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419207_84419309_84419424_84419592_84420452
ES.8060.7	chr12	+	1858	10	NIC	ENSMUSG00000021235.14	novel	1602	12	NA	NA	-3	0	intron_retention	FALSE	canonical	3	20	junction_5	69.1543273241402	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTTTCCTCTTCTGA	NA	False	NA	17	True	AATAAA	-17	NA	84408809	84420570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417129_84417697_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ES.8060.8	chr12	+	1637	9	NIC	ENSMUSG00000021235.14	novel	1583	12	NA	NA	-3	2	intron_retention	FALSE	canonical	2	3	junction_5	111.289038094504	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408809	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84415359_84415484_84417029_84417129_84417697_84417945_84418177_84418333_84418912_84419309_84419424_84419592_84420452
ES.8060.9	chr12	+	2602	8	NIC	ENSMUSG00000021235.14	novel	2056	11	NA	NA	-3	2	intron_retention	FALSE	canonical	3	218	junction_2	16.8934234275366	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTCTCTTTTCCTC	NA	False	NA	11	True	AATAAA	-11	NA	84408809	84420564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84409012_84413658_84413794_84414916_84415484_84417029_84417945_84418224_84418333_84418912_84419309_84419424_84419592_84420452
ES.8061.1	chr12	+	4224	1	Antisense	novelGene_ENSMUSG00000021236.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGGAGGAGGAGA	6029	False	NA	NA	False	NA	NA	NA	84423342	84427566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84423300_84427600
ES.8062.1	chr12	+	182	1	Intergenic	novelGene_6669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84450937	84451119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84450900_84451100
ES.8063.1	chr12	-	198	2	Intergenic	novelGene_6662	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATACACACATGTATAG	NA	False	NA	NA	False	NA	NA	NA	84451401	84283785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84283809_84451226
ES.8063.10	chr12	-	3211	8	NIC	ENSMUSG00000021234.10	novel	3000	9	NA	NA	-1	1	intron_retention	FALSE	canonical	1	2	junction_6	4.6246897303539	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGATGTTTGAGATATT	416	False	NA	NA	False	AATAAA	-22	NA	84408596	84392089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84393184_84393560_84393710_84395050_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
ES.8063.11	chr12	-	2999	9	FSM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	-7	8	-7	0	multi-exon	FALSE	canonical	1	2	junction_7	4.82020487116471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTGATGTTTGAGATAT	398	False	NA	NA	False	AATAAA	-21	NA	84408614	84392090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
ES.8063.12	chr12	-	10137	6	NNC	ENSMUSG00000021234.10	novel	3357	8	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	3.31058907144937	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTGATGTTTGAGATAT	432	False	NA	NA	False	AATAAA	-21	NA	84408580	84392090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84400702_84400956_84401153_84401483_84401822_84402697_84403252_84404301_84404625_84408465
ES.8063.13	chr12	-	4919	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-35	-3	-20	0	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCCTTTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	84455823	84420648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.14	chr12	-	4977	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	-5	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCCTTTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	84455808	84420648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.16	chr12	-	8382	15	FSM	ENSMUSG00000021236.17	ENSMUST00000021662.12	4931	15	-3469	18	39	0	multi-exon	TRUE	canonical	3	43	junction_8	4.52656557650139	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCCTTTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	84455719	84420648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179
ES.8063.17	chr12	-	4942	16	NNC	ENSMUSG00000021236.17	novel	4881	15	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	19.43010264741	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTCCTTTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	84455764	84420651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84454489_84454575_84455743
ES.8063.18	chr12	-	4317	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-1	565	-1	-565	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTGTTGTTATCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84455789	84421216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.19	chr12	-	4414	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	-13	571	-13	-568	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGTAGTGTTGTTATC	NA	False	NA	NA	False	AATAAA	-15	NA	84455816	84421219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.2	chr12	-	175	1	Intergenic	novelGene_6664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAACAAGCTG	NA	False	NA	NA	False	NA	NA	NA	84288711	84288536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84288500_84288700
ES.8063.20	chr12	-	3964	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-2	919	-2	-919	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGAGTCATGGAAGTCC	NA	False	NA	NA	False	NA	NA	NA	84455790	84421570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.21	chr12	-	4034	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	14	924	-1	-921	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCTGAGTCATGGAAGT	NA	False	NA	NA	False	NA	NA	NA	84455789	84421572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.22	chr12	-	3640	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-12	1253	3	-1253	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTGCTTATGTCCTGT	NA	False	NA	NA	False	AATACA	-20	NA	84455800	84421904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.23	chr12	-	2518	16	NNC	ENSMUSG00000021236.17	novel	4972	16	NA	NA	1	363	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.1487219488773	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTTGTATTTCCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	84455787	84423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431920_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.24	chr12	-	2061	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	21	2799	-9	0	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTCCTCAGTATTTT	NA	False	NA	NA	False	AATAGA	-23	NA	84455767	84423450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.25	chr12	-	2165	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	4	2803	4	-1	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTGTCCTCAGTATTT	NA	False	NA	NA	False	AATAGA	-22	NA	84455799	84423451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.26	chr12	-	3990	15	NIC	ENSMUSG00000021236.17	novel	4972	16	NA	NA	9	-2	intron_retention	FALSE	canonical	3	43	junction_7	4.52261889093621	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGCTGTCCTCAGTATT	NA	False	NA	NA	False	AATAGA	-21	NA	84455779	84423452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.27	chr12	-	5411	15	FSM	ENSMUSG00000021236.17	ENSMUST00000021662.12	4931	15	-3474	2994	34	158	multi-exon	FALSE	canonical	3	43	junction_8	4.52656557650139	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCTGTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84455724	84423624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179
ES.8063.28	chr12	-	1988	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	8	2976	-7	158	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCTGTTAATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	84455795	84423624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ES.8063.29	chr12	-	1905	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	1	2975	1	156	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAATGCTGTTAATTTTT	NA	False	NA	NA	False	NA	NA	NA	84455787	84423626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.3	chr12	-	278	1	Intergenic	novelGene_6665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAATTAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	84294902	84294624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84294600_84294900
ES.8063.30	chr12	-	1752	11	ISM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-12	9665	3	-3185	5prime_fragment	FALSE	canonical	2	7	junction_9	13.6102902246793	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGAATCTTTCGTCTT	NA	False	NA	NA	False	AGTAAA	-12	NA	84455800	84430316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ES.8063.31	chr12	-	853	3	NNC	ENSMUSG00000021236.17	novel	827	3	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAGTATTAAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84455803	84450191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84450915_84452179_84452250_84455743
ES.8063.32	chr12	-	219	1	Intergenic	novelGene_6670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGAAGGAAGGAATTG	NA	False	NA	NA	False	NA	NA	NA	84451402	84451183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84451200_84451400
ES.8063.4	chr12	-	170	1	Intergenic	novelGene_6666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAACCCAAAGCAACA	NA	False	NA	NA	False	NA	NA	NA	84294904	84294734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84294700_84294900
ES.8063.5	chr12	-	3063	1	Antisense	novelGene_ENSMUSG00000072946.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84343991	84340928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_84340900_84344000
ES.8063.6	chr12	-	198	1	Intergenic	novelGene_6668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAGATACTAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	84348448	84348250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84348200_84348400
ES.8063.7	chr12	-	4057	1	FSM	ENSMUSG00000113529.2	ENSMUST00000222984.2	3223	1	771	-1605	771	1605	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATTTAGAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	84363079	84359022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84359000_84363100
ES.8063.8	chr12	-	175	1	Antisense	novelGene_ENSMUSG00000042472.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	5400	False	NA	NA	False	NA	NA	NA	84377162	84376987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_84377000_84377200
ES.8063.9	chr12	-	3370	8	FSM	ENSMUSG00000021234.10	ENSMUST00000021659.2	3357	8	-11	-2	1	2	multi-exon	FALSE	canonical	1	2	junction_6	4.96929346597888	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATGTTTGAGATATTT	406	False	NA	NA	False	AATAAA	-23	NA	84408606	84392088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
ES.8064.1	chr12	+	2204	12	FSM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	-7	-10	-7	10	multi-exon	FALSE	canonical	0	0	junction_6	1.49931113658824	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGTTTATCGTCTCCT	4336	False	NA	NA	False	ATTAAA	-23	NA	84455837	84480564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84472055_84473481_84473976_84475116_84475219_84476778_84476854_84476992_84477108_84480074
ES.8064.2	chr12	+	6327	9	NIC	ENSMUSG00000057265.14	novel	2187	12	NA	NA	-6	6	intron_retention	FALSE	canonical	0	0	junction_6	1.65359456941537	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATCATTGTTTATCGTC	4337	False	NA	NA	False	ATTAAA	-19	NA	84455838	84480560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84476854_84476992_84477108_84480074
ES.8064.3	chr12	+	6628	4	ISM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	-3	13062	-3	-7703	intron_retention	FALSE	canonical	2	2	junction_3	1.63299316185545	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAATTAAAGTACAAA	4340	False	NA	NA	False	NA	NA	NA	84455841	84467492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347
ES.8064.4	chr12	+	3480	11	NNC	ENSMUSG00000057265.14	novel	2187	12	NA	NA	39	6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	1.68522995463527	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATCATTGTTTATCGTC	4382	False	NA	NA	False	ATTAAA	-19	NA	84455883	84480560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471964_84472055_84473481_84474014_84475333_84476854_84476992_84477108_84480074
ES.8064.5	chr12	+	1371	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	14	-2	14	2	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGTGTGATCTTTCTT	NA	False	NA	12	True	AATAAA	-21	NA	84463983	84465354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84464000_84465400
ES.8064.6	chr12	+	3132	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	95	-1844	95	1844	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAGGAAAAGGA	NA	False	NA	NA	False	AAAAAG	-8	NA	84464064	84467196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84464100_84467200
ES.8064.7	chr12	+	177	1	Intergenic	novelGene_6672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84468017	84468194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84468000_84468200
ES.8065.1	chr12	-	153	1	Intergenic	novelGene_6671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAACAAATCT	NA	False	NA	NA	False	NA	NA	NA	84456883	84456730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84456700_84456900
ES.8066.1	chr12	-	3410	13	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-9	19369	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.0888196514309	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	84497787	84458121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84458136_84477504_84479324_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.10	chr12	-	5814	11	ISM	ENSMUSG00000021238.12	ENSMUST00000222641.2	3471	12	1999	0	1999	0	3prime_fragment	FALSE	canonical	3	166	junction_5	8.98665677546439	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84493092	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502
ES.8066.11	chr12	-	5907	10	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_5	55.7323852480055	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGGTCTTTTCCTT	NA	False	NA	NA	False	AATAAA	-27	NA	84497777	84477496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84486632_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.12	chr12	-	3565	12	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	51.5315838319705	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGGTCTTTTCCTT	NA	False	NA	NA	False	AATAAA	-27	NA	84497807	84477496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486632_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.13	chr12	-	3431	13	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.638477452042	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTGGTCTTTTCCTT	NA	False	NA	NA	False	AATAAA	-27	NA	84497783	84477496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84486599_84486632_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.15	chr12	-	3198	12	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	51.757220919939	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAAGTGGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-25	NA	84497783	84477498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486385_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.16	chr12	-	3064	11	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-13	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	53.0363083179816	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAAAGTGGTCTTTTCC	NA	False	NA	NA	False	AATAAA	-25	NA	84497753	84477498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.18	chr12	-	3424	13	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-6	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	67.2858743637094	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTACTGAAAAAAGTGGT	NA	False	NA	NA	False	AATAAA	-18	NA	84497784	84477505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84496852_84496886_84497662
ES.8066.19	chr12	-	5395	8	NIC	ENSMUSG00000021238.12	novel	3471	12	NA	NA	5820	-16	intron_retention	FALSE	canonical	3	166	junction_5	4.68170560233541	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTACTGAAAAAAGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	84489271	84477506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84487088_84488536_84488699_84488844
ES.8066.2	chr12	-	3420	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-21	0	-20	0	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497798	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.20	chr12	-	5977	9	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-7	-16	intron_retention	FALSE	canonical	1	2	junction_5	59.5084027680125	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTACTGAAAAAAGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	84497785	84477506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84484871_84486385_84486490_84487008_84487088_84488536_84490563_84497662
ES.8066.22	chr12	-	3359	12	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-7	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.3052073004572	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACAGTACTGAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	84497785	84477511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484844_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.23	chr12	-	2174	4	NNC	ENSMUSG00000021238.12	novel	3471	12	NA	NA	13542	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	82.0406403355475	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAATACAGTACTGAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	84481549	84477512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84481464
ES.8066.24	chr12	-	2999	11	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-11	-109	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	53.0363083179816	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTTGTCCTTATATG	NA	False	NA	NA	False	ATTAAA	-18	NA	84497789	84477599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.25	chr12	-	3283	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	7	109	7	-109	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTTGTCCTTATATG	NA	False	NA	NA	False	ATTAAA	-18	NA	84497770	84477599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.27	chr12	-	2856	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-18	561	-17	-561	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACATTCCCTACTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	84497795	84478051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.28	chr12	-	1145	7	ISM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	-3	7032	-2	-259	5prime_fragment	FALSE	canonical	2	131	junction_6	21.5612821717283	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTGCTAAATCTTT	NA	False	NA	NA	False	AATAGA	-30	NA	84497780	84484522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.5	chr12	-	4854	11	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_6	53.0363083179816	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497774	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84486632_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.6	chr12	-	3440	12	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	52.9992982956823	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497776	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484706_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.7	chr12	-	3367	12	NNC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	79.6644823749337	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497777	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84479323_84480205_84480305_84480629_84480805_84483101_84483276_84483502_84483689_84484763_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ES.8066.9	chr12	-	3300	11	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	54.9505232004209	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497753	84477490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84490502_84490563_84497662
ES.8067.1	chr12	+	2378	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	-106	-2	-106	2	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGGTTTTCCTTGAA	NA	False	NA	7	True	AATAAA	-18	NA	84498089	84578349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ES.8067.10	chr12	+	211	1	Intergenic	novelGene_6673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATGTGAGTAATGTCT	NA	False	NA	NA	False	NA	NA	NA	84539377	84539588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84539400_84539600
ES.8067.11	chr12	+	177	1	Intergenic	novelGene_6675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATAATGCATTT	NA	False	NA	NA	False	NA	NA	NA	84556728	84556905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84556700_84556900
ES.8067.12	chr12	+	1687	2	NNC	ENSMUSG00000085793.4	novel	447	2	NA	NA	8117	1513	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84584934	84586939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84586563_84586880
ES.8067.14	chr12	+	362	1	Intergenic	novelGene_6676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84586576	84586938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84586600_84586900
ES.8067.15	chr12	+	226	1	Intergenic	novelGene_6677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTACATATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	84586579	84586805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84586600_84586800
ES.8067.2	chr12	+	3823	5	NIC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	76	-4	intron_retention	FALSE	canonical	3	123	junction_1	15.9216833280907	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGAGGCCCAGGTTTTC	NA	False	NA	1	True	AATAAA	-12	NA	84498271	84578343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84498318_84503014_84504761_84506392_84506460_84509142_84509227_84576463
ES.8067.3	chr12	+	4183	4	NIC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	79	370	intron_retention	FALSE	canonical	0	0	junction_3	66.5048035023703	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAATTGAGGCCCAGGT	NA	False	NA	NA	False	AATAAA	-15	NA	84498274	84593289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84498318_84503014_84506460_84509142_84509227_84592678
ES.8067.4	chr12	+	2134	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	87	-3	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	False	NA	2	True	AATAAA	-13	NA	84498282	84578344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
ES.8067.5	chr12	+	2040	7	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	87	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	57.1508724537274	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	False	NA	2	True	AATAAA	-13	NA	84498282	84578344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463_84576507_84576646
ES.8067.6	chr12	+	2264	7	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	87	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	69.0951437431669	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	False	NA	2	True	AATAAA	-13	NA	84498282	84578344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84573731_84573816_84576463
ES.8067.7	chr12	+	5442	4	NIC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	89	-4	intron_retention	FALSE	canonical	3	123	junction_1	17.7826382244655	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGAGGCCCAGGTTTTC	NA	False	NA	1	True	AATAAA	-12	NA	84498284	84578343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_84498318_84503014_84506460_84509142_84509227_84576463
ES.8067.8	chr12	+	2341	7	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	91	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	72.9811619529314	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	False	NA	2	True	AATAAA	-13	NA	84498286	84578344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84498318_84498504_84498670_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ES.8067.9	chr12	+	3755	5	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	98	-3	intron_retention	FALSE	canonical	3	17	junction_4	57.8662250367172	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	False	NA	2	True	AATAAA	-13	NA	84498293	84578344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84498318_84503014_84503090_84504722_84506460_84509142_84509181_84576463
ES.8068.1	chr12	-	2524	1	Antisense	novelGene_ENSMUSG00000085793.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84505067	84502543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_84502500_84505100
ES.8069.1	chr12	-	5823	1	Intergenic	novelGene_6674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTCTGGGATGCTGCT	NA	False	NA	NA	False	NA	NA	NA	84553123	84547300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84547300_84553100
ES.807.1	chr1	-	170	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCCAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	75405603	75405433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75405400_75405600
ES.8070.1	chr12	-	176	1	Intergenic	novelGene_6678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGCCATTCCTTG	NA	False	NA	NA	False	NA	NA	NA	84596723	84596547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84596500_84596700
ES.8071.1	chr12	-	177	1	Intergenic	novelGene_6679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAACAAATTCA	3850	False	NA	NA	False	NA	NA	NA	84613522	84613345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84613300_84613500
ES.8072.1	chr12	+	165	1	Antisense	novelGene_ENSMUSG00000021240.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAGTAA	NA	False	NA	NA	False	NA	NA	NA	84656581	84656746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84656600_84656700
ES.8073.10	chr12	-	4717	18	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	12	1	intron_retention	FALSE	canonical	3	21	junction_13	57.9930195059602	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664175	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.11	chr12	-	2194	9	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	138	1	intron_retention	FALSE	canonical	1	2	junction_8	98.2099154871849	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84658541	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84658494
ES.8073.12	chr12	-	2355	18	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.8794059138462	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664186	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.13	chr12	-	2989	18	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-20	1	intron_retention	FALSE	canonical	3	128	junction_17	36.261258840994	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664164	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.14	chr12	-	4913	12	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-18	1	intron_retention	FALSE	canonical	3	141	junction_11	32.4635841755137	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84662179	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84650800_84651106_84651160_84651754_84651805_84652121_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84661979_84662099
ES.8073.18	chr12	-	3759	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-20	1	intron_retention	FALSE	canonical	3	21	junction_13	58.6477834193246	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664164	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84661979_84662099_84662219_84664056
ES.8073.19	chr12	-	1546	2	NNC	ENSMUSG00000021240.7	novel	2410	18	NA	NA	1233	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84660928	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649477_84659553
ES.8073.2	chr12	-	3999	11	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-659	3	intron_retention	FALSE	canonical	0	0	junction_8	89.6602476017103	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	84659338	84649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650800_84651106_84651805_84652121_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84656481_84658494_84658546_84659098_84659220_84659310
ES.8073.21	chr12	-	1815	14	NNC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	84.1769058548123	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84664154	84649306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84663895_84663953_84664056
ES.8073.25	chr12	-	3855	4	NIC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	-3554	0	intron_retention	FALSE	canonical	3	217	junction_3	18.624953392932	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84654380	84649306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84650800_84651106_84651160_84651754_84651805_84652121
ES.8073.26	chr12	-	3938	17	NNC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_16	76.9796036297927	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84664129	84649306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659671_84660678_84661979_84662099_84662219_84663895_84663923_84664056
ES.8073.27	chr12	-	1884	15	NNC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	-678	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	60.4549503383152	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATAGACTGATTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	84659357	84649306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659310
ES.8073.3	chr12	-	2542	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-110	-123	-67	3	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	84664254	84649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.30	chr12	-	3173	13	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1233	-7	intron_retention	FALSE	canonical	0	0	junction_10	84.6778207875789	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTCTACAATAGACTGA	NA	False	NA	NA	False	AATAAA	-17	NA	84660928	84649313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652757_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659096_84659225_84659553_84659671_84660678
ES.8073.32	chr12	-	2538	17	NNC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	-3	-8	intron_retention	FALSE	canonical	1	2	junction_2	83.9753498057615	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTCTACAATAGACTG	NA	False	NA	NA	False	AATAAA	-16	NA	84664147	84649314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650274_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659220_84659553_84659671_84660678_84660819_84661850_84662219_84664056
ES.8073.33	chr12	-	2404	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	-80	-15	-37	2	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGACATTTCACAATGA	NA	False	NA	NA	False	AAAAAG	-15	NA	84664224	84649411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.34	chr12	-	2027	17	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1236	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	58.220452538176	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGACATTTCACAATGA	NA	False	NA	NA	False	AAAAAG	-15	NA	84660925	84649411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660765_84660833
ES.8073.35	chr12	-	2201	13	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-656	2	intron_retention	FALSE	canonical	1	2	junction_10	84.5969200910346	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGACATTTCACAATGA	NA	False	NA	NA	False	AAAAAG	-15	NA	84659335	84649411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84658494_84658546_84659098_84659225_84659310
ES.8073.37	chr12	-	2390	20	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	71.1723747335141	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTGACATTTCACAATG	NA	False	NA	NA	False	AAAAAG	-14	NA	84664154	84649412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895_84663953_84664056
ES.8073.38	chr12	-	2776	17	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-10	-3	intron_retention	FALSE	canonical	2	11	junction_5	59.4003564278027	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGTGACATTTCAC	NA	False	NA	NA	False	AAAAAG	-10	NA	84664154	84649416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.39	chr12	-	2717	14	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1233	-3	intron_retention	FALSE	canonical	3	177	junction_12	25.4484047000033	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGTGACATTTCAC	NA	False	NA	NA	False	AAAAAG	-10	NA	84660928	84649416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
ES.8073.40	chr12	-	2636	10	NIC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	1764	-3	intron_retention	FALSE	canonical	3	192	junction_9	21.7562251627743	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGTGACATTTCAC	NA	False	NA	NA	False	AAAAAG	-10	NA	84656915	84649416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84653083_84655343_84655434_84655579_84655672_84655748
ES.8073.41	chr12	-	1804	15	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-708	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_14	60.4549503383152	222	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGTGACATTTCAC	NA	False	NA	NA	False	AAAAAG	-10	NA	84659387	84649416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659310
ES.8073.42	chr12	-	6451	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-12	-17	intron_retention	FALSE	canonical	3	128	junction_14	36.0673972287597	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	84664156	84649443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84658546_84659098_84659671_84660678_84661979_84662099_84662219_84664056
ES.8073.43	chr12	-	2219	16	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1235	-18	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	58.3676470505898	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84660926	84649444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650339_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678
ES.8073.44	chr12	-	1949	15	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	1232	-19	combination_of_known_splicesites	FALSE	canonical	3	11	junction_14	59.0086901244561	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCGAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	84660929	84649445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84660678
ES.8073.5	chr12	-	2602	19	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-17	3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	72.9275177111231	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	84664161	84649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649934_84650067_84650335_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659096_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.6	chr12	-	1656	12	NNC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-10	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.9607078769546	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	84664154	84649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84649438_84654970_84655434_84655579_84655643_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ES.8073.7	chr12	-	4199	15	NIC	ENSMUSG00000021240.7	novel	2581	19	NA	NA	-1	3	intron_retention	FALSE	canonical	3	128	junction_14	38.0234218902626	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGACTGATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-27	NA	84664132	84649303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659098_84659671_84660678_84661979_84662099_84662219_84664056
ES.8073.8	chr12	-	4241	14	NIC	ENSMUSG00000021240.7	novel	2309	19	NA	NA	-18	2	intron_retention	FALSE	canonical	3	141	junction_13	32.8208333317683	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAGACTGATTTTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	84662179	84649304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84661979_84662099
ES.8073.9	chr12	-	3422	17	NIC	ENSMUSG00000021240.7	novel	2410	18	NA	NA	-10	1	intron_retention	FALSE	canonical	2	5	junction_16	58.7755263693997	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGACTGATTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	84664154	84649305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84649934_84650067_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895
ES.8074.1	chr12	-	330	1	Intergenic	novelGene_6680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84665196	84664866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84664900_84665200
ES.8074.2	chr12	-	174	1	Intergenic	novelGene_6681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTCACGC	NA	False	NA	NA	False	NA	NA	NA	84665197	84665023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84665000_84665200
ES.8075.1	chr12	+	160	1	Intergenic	novelGene_6682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	84670150	84670310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84670200_84670300
ES.8076.1	chr12	+	3189	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	-91	0	-91	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCCTCCGGGATTT	NA	False	NA	NA	False	AATAAA	-22	NA	84687701	84698229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84687912_84695250
ES.8076.2	chr12	+	2776	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	-87	409	-87	-409	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGTATCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84687705	84697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84687912_84695250
ES.8076.3	chr12	+	3367	2	NNC	ENSMUSG00000071235.13	novel	516	2	NA	NA	373	-409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGTATCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84688165	84697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84688963_84695250
ES.8076.4	chr12	+	2617	2	NNC	ENSMUSG00000071235.13	novel	516	2	NA	NA	385	-409	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTGTATCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	84688177	84697820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84688225_84695250
ES.8077.1	chr12	-	208	1	Intergenic	novelGene_6683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCCCAACAAAATAGTATA	5837	False	NA	NA	False	NA	NA	NA	84692957	84692749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84692700_84693000
ES.8078.1	chr12	-	135	1	Intergenic	novelGene_6684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	3788	False	NA	NA	False	NA	NA	NA	84695006	84694871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84694900_84695000
ES.8079.1	chr12	+	177	1	Intergenic	novelGene_6685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	84706788	84706965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84706800_84707000
ES.808.1	chr1	+	1550	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	0	-11	0	6	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTACTTGCGCCTGGAC	NA	False	NA	24	True	AATAAA	-28	NA	75412573	75419829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.10	chr1	+	1731	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-2	2	intron_retention	FALSE	canonical	3	5	junction_6	91.0305199125851	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTGGACTCCTACTTG	NA	False	NA	15	True	AATAAA	-19	NA	75412608	75419820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417131_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.11	chr1	+	2463	4	NNC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	2.16024689946929	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412609	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412701_75415988_75416049_75417131_75418254_75418628
ES.808.12	chr1	+	3197	9	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-1	0	intron_retention	FALSE	canonical	3	225	junction_7	28.9716995531847	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412609	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418922_75419087
ES.808.13	chr1	+	3230	9	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_1	57.2800139664787	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412610	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75418254_75418373_75418922_75419087_75419257_75419544
ES.808.14	chr1	+	5016	5	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	1	-2	intron_retention	FALSE	canonical	3	122	junction_1	70.89913610193	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCAGCTTGGACTCCT	NA	False	NA	10	True	AATAAA	-14	NA	75412612	75419815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75415673_75415988_75416049_75417055
ES.808.15	chr1	+	2918	11	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	1	0	intron_retention	FALSE	canonical	3	122	junction_1	52.8276442783511	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412612	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.16	chr1	+	3359	9	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	8	junction_1	92.5985961016688	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413427_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75418254_75418373_75418472_75418628_75418676_75418828
ES.808.17	chr1	+	3719	6	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	5	junction_5	122.551866570852	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417131
ES.808.18	chr1	+	1791	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	14	junction_1	75.8797934601535	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTGGACTCCTACTTGC	NA	False	NA	16	True	AATAAA	-20	NA	75412619	75419821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412957_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.19	chr1	+	1798	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGACTCCTACTTGCG	NA	False	NA	17	True	AATAAA	-21	NA	75412619	75419822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.2	chr1	+	1733	14	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	3	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	88.7478310427522	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412576	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75412758_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.20	chr1	+	3522	9	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	intron_retention	FALSE	canonical	3	82	junction_1	70.1141925718324	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75418254_75418373_75418922_75419087_75419257_75419544
ES.808.21	chr1	+	1833	13	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1	junction_1	79.2920060423636	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412957_75413381_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.22	chr1	+	1658	14	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.7478310427522	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412619	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412656_75412790_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.23	chr1	+	2569	10	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-6	0	intron_retention	FALSE	canonical	3	243	junction_6	21.0490315310482	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412619	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418922_75419087_75419257_75419544
ES.808.26	chr1	+	1756	12	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_9	96.1904962574159	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412621	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418816_75418922_75419087_75419257_75419544
ES.808.27	chr1	+	3162	10	NNC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-3	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	93.4011658266522	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGCCAGCTTGGACTCC	NA	False	NA	9	True	AATAAA	-13	NA	75412622	75419814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412656_75413421_75413483_75413580_75414999_75415485_75415673_75415988_75416049_75417055_75417193_75418118_75418254_75418373_75418472_75418628_75418676_75418828
ES.808.28	chr1	+	1922	13	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	79.5551433493356	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412624	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75413090_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.29	chr1	+	1668	14	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.7478310427522	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412626	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412656_75412774_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.3	chr1	+	2015	12	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	122	junction_1	50.6897873881371	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412583	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.31	chr1	+	2734	11	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	5	1	intron_retention	FALSE	canonical	3	225	junction_7	26.4781041617409	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412632	75419819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75413483_75413580_75413679_75414894_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.32	chr1	+	2373	9	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	82	junction_1	68.3442572569195	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412636	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75419257_75419544
ES.808.33	chr1	+	1642	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	22	-2	intron_retention	FALSE	canonical	2	5	junction_1	78.2403703694937	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCAGCTTGGACTCCT	NA	False	NA	10	True	AATAAA	-14	NA	75412649	75419815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412838_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.34	chr1	+	3293	4	ISM	ENSMUSG00000033021.17	ENSMUST00000188097.2	776	8	1056	-1148	1056	2	intron_retention	FALSE	canonical	3	5	junction_3	129.600240054647	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTGGACTCCTACTTG	NA	False	NA	15	True	AATAAA	-19	NA	75414641	75419820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_75414999_75415485_75415673_75415988_75416049_75417131
ES.808.4	chr1	+	4036	6	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	2	1	intron_retention	FALSE	canonical	3	5	junction_4	112.318475773134	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	False	NA	14	True	AATAAA	-18	NA	75412588	75419819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75415673_75415988_75416049_75417131_75417187_75418118
ES.808.5	chr1	+	1675	12	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	8	0	intron_retention	FALSE	canonical	3	122	junction_1	49.3965234497897	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412594	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.6	chr1	+	1746	11	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-5	0	intron_retention	FALSE	canonical	3	5	junction_6	93.7786756144487	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412599	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417131_75417187_75418118_75418254_75418373_75418922_75419087_75419257_75419544
ES.808.7	chr1	+	2597	11	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	122	junction_1	52.8190306613062	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412600	75419818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75418254_75418373_75418472_75418628_75418922_75419087_75419257_75419544
ES.808.8	chr1	+	1508	13	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	77.4526288916149	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGACTCCTACTTGCG	NA	False	NA	17	True	AATAAA	-21	NA	75412602	75419822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75412656_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.808.9	chr1	+	1758	12	NNC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	-1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	81.9424309101889	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412603	75419817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75412957_75413570_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ES.8080.1	chr12	+	177	1	Intergenic	novelGene_6686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAAAGTGGCTT	NA	False	NA	NA	False	NA	NA	NA	84719839	84720016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84719800_84720000
ES.8081.1	chr12	-	193	1	Intergenic	novelGene_6687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACTA	9249	False	NA	NA	False	NA	NA	NA	84763840	84763647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_84763600_84763800
ES.8082.1	chr12	-	3093	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	210	-4	-28	4	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGATGCCTGATTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	84819716	84801331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8082.2	chr12	-	2149	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	258	892	20	-892	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGAGGTCTTTTGTGT	NA	False	NA	NA	False	AATGAA	-28	NA	84819668	84802227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8082.3	chr12	-	1514	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	-51	1836	-51	94	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCAGTCTGTGG	NA	False	NA	-1	True	CATAAA	-20	NA	84819977	84803171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8082.4	chr12	-	5546	3	NIC	ENSMUSG00000021242.10	novel	3299	4	NA	NA	-26	5	intron_retention	FALSE	canonical	3	2850	junction_2	140	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTGTTTTTTAACG	NA	False	NA	-22	True	ATTAAA	-22	NA	84819714	84803260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84803987_84807493_84812159_84819559
ES.8082.5	chr12	-	1135	4	NNC	ENSMUSG00000021242.10	novel	3299	4	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1352.3082324513	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	False	NA	-27	True	ATTAAA	-17	NA	84819720	84803265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84803959_84807493_84807667_84812050_84812159_84819559
ES.8082.7	chr12	-	1109	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	253	1937	15	-7	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCAGGTGCTTGGTTT	NA	False	NA	-34	True	ATTAAA	-10	NA	84819673	84803272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8082.8	chr12	-	786	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	212	2301	-26	-371	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTGCTGTTGGATTA	NA	False	NA	NA	False	NA	NA	NA	84819714	84803636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8082.9	chr12	-	814	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	62	2423	62	-493	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAGTAACTGCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	84819864	84803758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ES.8083.1	chr12	+	863	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	-54	-82	0	1	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820024	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
ES.8083.10	chr12	+	780	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	18	790	4	-38	multi-exon	FALSE	canonical	3	86	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATATATATACACCAA	NA	False	NA	NA	False	NA	NA	NA	84820068	84821072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820369
ES.8083.3	chr12	+	746	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-52	-209	-4	1	multi-exon	FALSE	canonical	3	134	junction_2	92.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820046	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820348_84820452_84821316
ES.8083.4	chr12	+	862	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	22	-1	-4	1	multi-exon	FALSE	canonical	0	0	junction_3	133.217449641137	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820046	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
ES.8083.5	chr12	+	1511	2	NNC	ENSMUSG00000021241.8	novel	1588	2	NA	NA	-1	1	intron_retention	FALSE	canonical	1	1	junction_1	0	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820049	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_84820070_84820369
ES.8083.6	chr12	+	1809	1	FSM	ENSMUSG00000021241.8	ENSMUST00000222136.2	416	1	0	-1393	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820051	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820100_84821900
ES.8083.7	chr12	+	1584	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	2	2	1	1	multi-exon	FALSE	canonical	3	86	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTATCGTGTTTTCA	NA	False	NA	13	True	TATAAA	-16	NA	84820052	84821860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820369
ES.8083.8	chr12	+	1605	2	FSM	ENSMUSG00000021241.8	ENSMUST00000223089.2	843	2	-11	-751	2	-1	multi-exon	FALSE	canonical	3	319	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTATCGTGTTTTCAA	NA	False	NA	14	True	TATAAA	-17	NA	84820053	84821861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820348
ES.8083.9	chr12	+	540	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	-13	200	1	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCGGCTCTCATCTTAT	NA	False	NA	NA	False	NA	NA	NA	84820065	84821578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
ES.8084.1	chr12	-	4055	19	NNC	ENSMUSG00000002020.16	novel	6602	35	NA	NA	-2639	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.67648654898798	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGCTTAGTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	84848876	84829984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84848412
ES.8084.2	chr12	-	4174	20	NNC	ENSMUSG00000002020.16	novel	6769	36	NA	NA	-2633	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.42448269605916	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGCTTAGTTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84848870	84829985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838370_84838497_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84848412
ES.8084.3	chr12	-	3652	19	NNC	ENSMUSG00000002020.16	novel	6602	35	NA	NA	-2639	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	2.83333333333333	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCCTTCTGTGCTTAGT	NA	False	NA	NA	False	AATAAA	-10	NA	84848876	84829989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84848810
ES.8085.1	chr12	+	173	1	Intergenic	novelGene_6688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCATGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	84889117	84889290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84889100_84889300
ES.8086.1	chr12	+	1765	13	Antisense	novelGene_ENSMUSG00000042350.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	2242	False	NA	NA	False	NA	NA	NA	84973169	84997918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84973179_84974065_84974185_84974642_84974719_84976891_84977013_84977121_84977264_84978470_84978551_84980925_84981176_84981344_84981525_84981727_84981901_84986936_84987172_84988504_84988730_84990103_84990167_84997826
ES.8086.2	chr12	+	174	1	Intergenic	novelGene_6689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAAAGTTAT	8521	False	NA	NA	False	NA	NA	NA	84979448	84979622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_84979400_84979600
ES.8086.3	chr12	+	3494	2	Antisense	novelGene_ENSMUSG00000042350.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84981277	84984974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_84981525_84981727
ES.8087.1	chr12	-	7369	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	39	-1962	-5	1960	multi-exon	TRUE	canonical	0	0	junction_19	22.9818668733885	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCCTTATATGAAACAG	NA	False	NA	NA	False	AATAAA	-13	NA	85017635	84962961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.12	chr12	-	5369	20	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_19	29.9342770386768	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAAATGAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	85017640	84964924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980967_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.13	chr12	-	5296	19	FSM	ENSMUSG00000042350.14	ENSMUST00000163231.8	5262	19	-37	3	-5	-1	multi-exon	FALSE	canonical	0	0	junction_18	31.0521763218134	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAAATGAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	85017635	84964924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.15	chr12	-	5408	20	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-5	-7	intron_retention	FALSE	canonical	0	0	junction_19	30.2310584913417	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAGCTAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	85017635	84964930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84972999_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.17	chr12	-	4703	8	ISM	ENSMUSG00000042350.14	ENSMUST00000163231.8	5262	19	41438	9	13992	-7	3prime_fragment	FALSE	canonical	1	2	junction_7	35.8921286351086	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAGCTAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	84976160	84964930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974642
ES.8087.18	chr12	-	7912	19	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-5	-7	intron_retention	FALSE	canonical	0	0	junction_18	23.5937844922485	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAGCTAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	85017635	84964930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84967355_84967453_84967630_84968031_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.19	chr12	-	5540	21	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-5	-7	intron_retention	FALSE	canonical	0	0	junction_19	29.8879156181892	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAGCTAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	85017635	84964930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85012662_85012803_85017402
ES.8087.2	chr12	-	6836	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	34	-1424	-10	1422	multi-exon	FALSE	canonical	0	0	junction_19	22.9818668733885	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGAGTCCGTTAATT	NA	False	NA	NA	False	NA	NA	NA	85017640	84963499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.20	chr12	-	5211	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-5311	-7	intron_retention	FALSE	canonical	0	0	junction_19	22.9818668733885	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAAGAGCTAAATGA	NA	False	NA	NA	False	AATAAA	-9	NA	84999008	84964930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_84998964
ES.8087.21	chr12	-	5152	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	31	263	-13	-263	multi-exon	FALSE	canonical	0	0	junction_19	22.9818668733885	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTATTCATATTCCT	NA	False	NA	NA	False	GATAAA	-22	NA	85017643	84965186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.22	chr12	-	4181	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	3	-1149	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	21.533971100504	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGATTTCCCAGTTTCT	NA	False	NA	NA	False	AATGAA	-23	NA	85017627	84966072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017471
ES.8087.3	chr12	-	5348	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-11	2	intron_retention	FALSE	canonical	3	7	junction_19	21.533971100504	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATGAGTGTTTGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	85017641	84964919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017471
ES.8087.4	chr12	-	5448	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	2	-4	2	2	multi-exon	FALSE	canonical	0	0	junction_19	22.9818668733885	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATGAGTGTTTGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	85017672	84964919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ES.8087.5	chr12	-	5391	20	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	-7	2	intron_retention	FALSE	canonical	0	0	junction_19	22.9818668733885	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATGAGTGTTTGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	85017637	84964919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017424
ES.8087.6	chr12	-	3810	12	NIC	ENSMUSG00000042350.14	novel	5262	19	NA	NA	8785	2	intron_retention	FALSE	canonical	1	2	junction_7	29.4379863666371	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAATGAGTGTTTGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	84981367	84964919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343
ES.8087.8	chr12	-	4467	15	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	3146	1	intron_retention	FALSE	canonical	1	2	junction_8	25.90760663652	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAATGAGTGTTTGAGT	NA	False	NA	NA	False	AATAAA	-19	NA	84987006	84964920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976918_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933
ES.8087.9	chr12	-	5397	20	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_19	29.7654729426795	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAAATGAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-18	NA	85017653	84964921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534_84988732_84990105_84990167_84997826_84998156_85017402
ES.8088.1	chr12	+	743	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	8	-2	8	2	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGTCTCAATTCTTAAA	4637	False	NA	25	True	ATTAAA	-27	NA	85017678	85030079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.11	chr12	+	1986	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	-39	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	765.891637243808	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4674	False	NA	16	True	ATTAAA	-18	NA	85017715	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85017740_85017988_85019346_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.13	chr12	+	702	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	-37	-1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	764.176627729053	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4676	False	NA	16	True	ATTAAA	-18	NA	85017717	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85017740_85017988_85018064_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.14	chr12	+	1962	8	NNC	ENSMUSG00000021243.15	novel	731	8	NA	NA	-21	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	998.075392841602	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4692	False	NA	16	True	ATTAAA	-18	NA	85017733	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85018601_85018820_85019311_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.15	chr12	+	751	8	FSM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	-15	-5	-15	-1	multi-exon	FALSE	canonical	3	15	junction_1	770.463443887734	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4698	False	NA	16	True	ATTAAA	-18	NA	85017739	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85017818_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.16	chr12	+	3370	2	Genic_Genomic	ENSMUSG00000021243.15	novel	749	8	NA	NA	349	-8376	multi-exon	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5062	False	NA	NA	False	NA	NA	NA	85018103	85021689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_85018608_85018823
ES.8088.2	chr12	+	2212	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	21	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	766.577684868778	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4650	False	NA	16	True	ATTAAA	-18	NA	85017691	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85017740_85017988_85018608_85018823_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.3	chr12	+	1987	2	NIC	ENSMUSG00000021243.15	novel	749	8	NA	NA	31	-8353	intron_retention	FALSE	canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCATTTTATGATAGG	4660	False	NA	NA	False	NA	NA	NA	85017701	85021712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85017740_85019763
ES.8088.5	chr12	+	825	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	35	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	766.577684868778	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4664	False	NA	16	True	ATTAAA	-18	NA	85017705	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85017740_85017988_85018175_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.7	chr12	+	3758	2	ISM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	35	8365	35	-8353	intron_retention	FALSE	canonical	3	1900	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCATTTTATGATAGG	4664	False	NA	NA	False	NA	NA	NA	85017705	85021712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85017740_85017988
ES.8088.8	chr12	+	634	7	NIC	ENSMUSG00000021243.15	novel	749	8	NA	NA	40	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	827.585729026842	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4669	False	NA	16	True	ATTAAA	-18	NA	85017710	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85017740_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ES.8088.9	chr12	+	708	8	NNC	ENSMUSG00000021243.15	novel	749	8	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	762.233372587237	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	4671	False	NA	16	True	ATTAAA	-18	NA	85017712	85030070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027280_85027377_85029009_85029105_85029942
ES.8089.1	chr12	-	1068	1	Antisense	novelGene_ENSMUSG00000021243.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85027908	85026840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_85026800_85027900
ES.809.1	chr1	+	173	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGGGAGGGAGCAGGGAC	525	False	NA	NA	False	NA	NA	NA	75436532	75436705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75436500_75436700
ES.8090.1	chr12	+	232	1	Intergenic	novelGene_6690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATACTATGTTATGTT	3858	False	NA	NA	False	NA	NA	NA	85033812	85034044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85033800_85034000
ES.8091.1	chr12	-	178	1	Intergenic	novelGene_6691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAATAAACTCA	NA	False	NA	NA	False	NA	NA	NA	85039903	85039725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85039700_85039900
ES.8092.1	chr12	+	139	1	Intergenic	novelGene_6692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	85042314	85042453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85042300_85042500
ES.8093.1	chr12	+	7078	21	FSM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-75	0	-44	0	multi-exon	FALSE	canonical	3	62	junction_4	25.0129466476863	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043050	85117289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.10	chr12	+	7213	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-30	12258	1	-1079	5prime_fragment	FALSE	canonical	3	62	junction_4	25.712275157014	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGAGTCTCAGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	85043095	85105031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.11	chr12	+	5429	5	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-25	38747	6	-18853	5prime_fragment	FALSE	canonical	3	62	junction_4	19.5576072156079	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTAATGTGTTTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	85043100	85078542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543
ES.8093.12	chr12	+	6857	19	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	6	-3	intron_retention	FALSE	canonical	3	7	junction_16	43.050537341967	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGATTCATAGGCTGT	NA	False	NA	6	True	AATAAA	-16	NA	85043100	85117263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85111744_85111876_85116392_85116574_85116878
ES.8093.13	chr12	+	6339	16	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-25	19976	6	-82	5prime_fragment	FALSE	canonical	3	62	junction_4	25.7435212993267	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACATTATTTCATACCA	NA	False	NA	NA	False	AATAAA	-17	NA	85043100	85097313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062
ES.8093.14	chr12	+	6102	15	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-24	20473	7	-579	5prime_fragment	FALSE	canonical	3	62	junction_4	26.3614011271737	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATGCTGGAGAATCCC	NA	False	NA	NA	False	AATAAA	-20	NA	85043101	85096816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717
ES.8093.16	chr12	+	9976	20	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	14	-3	intron_retention	FALSE	canonical	3	62	junction_4	25.5055259886104	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGGCCCTTTTCTCTT	NA	False	NA	28	True	AATAAA	-38	NA	85043108	85117285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.17	chr12	+	5078	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	18	12235	-13	-1079	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGAGTCTCAGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	85043112	85105031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.18	chr12	+	7033	21	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-11	7	intron_retention	FALSE	non_canonical	0	0	junction_10	42.5042350831067	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCTGTACAGTATGGG	NA	False	NA	16	True	AATAAA	-26	NA	85043114	85117273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089840_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097151_85103969_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.19	chr12	+	7043	22	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_1	42.5984254443769	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCATAGGCTGTACA	NA	False	NA	9	True	AATAAA	-19	NA	85043116	85117266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85051302_85051357_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.2	chr12	+	4301	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-36	13066	-36	-1910	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTCCTGGAGGCTATGT	NA	False	NA	NA	False	AGTAAA	-12	NA	85043058	85104200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.20	chr12	+	8654	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-7	10794	-7	385	5prime_fragment	FALSE	canonical	3	62	junction_4	25.712275157014	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGGTACATGAATTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	85043118	85106495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.21	chr12	+	9775	21	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	9	5	intron_retention	FALSE	canonical	1	1	junction_7	35.9753735213409	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGGCTGTACAGTATG	NA	False	NA	14	True	AATAAA	-24	NA	85043134	85117271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087381_85087541_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.22	chr12	+	4736	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	45	12550	14	-1394	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTGGCTAATGAGGTAC	NA	False	NA	NA	False	AGTAAA	-24	NA	85043139	85104716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.23	chr12	+	7229	23	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	14	0	intron_retention	FALSE	canonical	0	0	junction_17	51.3543032550332	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCATAGGCTGTACA	NA	False	NA	9	True	AATAAA	-19	NA	85043139	85117266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85106396_85106525_85107036_85107089_85111744_85111876_85114851_85114987_85116392_85116574_85116878
ES.8093.24	chr12	+	6512	16	ISM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	48	10771	17	385	5prime_fragment	FALSE	canonical	3	22	junction_4	32.2065555783636	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGGTACATGAATTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	85043142	85106495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.25	chr12	+	4750	19	NIC	ENSMUSG00000021244.16	novel	4893	20	NA	NA	17	-2	intron_retention	FALSE	canonical	3	14	junction_6	39.3910436646156	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGATTCATAGGCTGTA	NA	False	NA	7	True	AATAAA	-17	NA	85043142	85117264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.26	chr12	+	6860	18	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	17	-1081	intron_retention	FALSE	canonical	1	1	junction_17	37.0734798282329	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATAATTGAGTCTCAGT	NA	False	NA	NA	False	ATTAAA	-18	NA	85043142	85105029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85104380
ES.8093.27	chr12	+	4953	15	NIC	ENSMUSG00000021244.16	novel	4893	20	NA	NA	19	-1079	intron_retention	FALSE	canonical	3	14	junction_6	42.0272020753906	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGAGTCTCAGTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	85043144	85105031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8093.28	chr12	+	182	1	Intergenic	novelGene_6694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAAGTATTGACAA	NA	False	NA	NA	False	NA	NA	NA	85061011	85061193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85061000_85061200
ES.8093.29	chr12	+	4575	13	ISM	ENSMUSG00000021244.16	ENSMUST00000164558.8	5416	17	373	19807	373	64	5prime_fragment	FALSE	canonical	3	62	junction_1	24.3006344224453	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGCATTAGCTGGGC	NA	False	NA	NA	False	AATAAA	-21	NA	85061847	85097459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062
ES.8093.3	chr12	+	6617	20	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-29	-7	intron_retention	FALSE	non_canonical	0	0	junction_5	36.4247792434805	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTATGGGCCCTTTTC	NA	False	NA	24	True	AATAAA	-34	NA	85043065	85117281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077429_85087433_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.30	chr12	+	3294	17	NNC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-12171	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.579392345731	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCATAGGCTGTACA	NA	False	NA	9	True	AATAAA	-19	NA	85076829	85117266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116579_85116878
ES.8093.31	chr12	+	5279	3	FSM	ENSMUSG00000021244.16	ENSMUST00000166605.2	915	3	-4283	-81	436	4	multi-exon	FALSE	canonical	3	136	junction_1	10.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGGCTGTACAGTAT	NA	False	NA	13	True	AATAAA	-23	NA	85107169	85117270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85111876_85116392_85116574_85116878
ES.8093.32	chr12	+	4776	2	ISM	ENSMUSG00000021244.16	ENSMUST00000167838.8	812	4	1259	-262	1259	-3	intron_retention	FALSE	canonical	3	136	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGGCCCTTTTCTCTT	NA	False	NA	28	True	AATAAA	-38	NA	85107992	85117285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85111876_85116392
ES.8093.33	chr12	+	2446	3	NNC	ENSMUSG00000021244.16	novel	4893	20	NA	NA	1649	-8	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	77	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAATGAGATTCATAG	1933	False	NA	1	True	AATAAA	-11	NA	85113101	85117258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85114987_85116392_85116574_85116878
ES.8093.34	chr12	+	174	1	Intergenic	novelGene_6695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAGAAATCA	4261	False	NA	NA	False	NA	NA	NA	85115429	85115603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85115400_85115600
ES.8093.4	chr12	+	4942	20	FSM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	-27	-22	-27	0	multi-exon	FALSE	canonical	3	22	junction_4	30.3797753105983	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCCCTTTTCTCTTATT	NA	False	NA	31	True	AATAAA	-41	NA	85043067	85117288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.5	chr12	+	7860	19	NIC	ENSMUSG00000021244.16	novel	4893	20	NA	NA	-3	4	intron_retention	FALSE	canonical	3	22	junction_4	31.070658223944	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGGCTGTACAGTAT	NA	False	NA	13	True	AATAAA	-23	NA	85043091	85117270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.7	chr12	+	6942	20	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	14	junction_7	34.7977138103438	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCCCTTTTCTCTTAT	NA	False	NA	30	True	AATAAA	-40	NA	85043091	85117287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ES.8093.8	chr12	+	6984	20	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7	junction_17	35.9467134100762	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043092	85117289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85111744_85111876_85116392_85116574_85116878
ES.8093.9	chr12	+	6390	17	ISM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	-31	13082	0	-1903	5prime_fragment	FALSE	canonical	3	62	junction_4	25.712275157014	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGCTATGTACGCTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	85043094	85104207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995
ES.8094.1	chr12	-	227	1	Intergenic	novelGene_6693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGTTCTTTCTAAAG	NA	False	NA	NA	False	NA	NA	NA	85055875	85055648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85055600_85055900
ES.8095.1	chr12	+	176	1	Intergenic	novelGene_6696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATGTATATAT	4287	False	NA	NA	False	NA	NA	NA	85126350	85126526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85126400_85126500
ES.8096.1	chr12	+	5592	1	Genic_Genomic	ENSMUSG00000093629.2	novel	NA	NA	NA	NA	-1643	2094	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTACTAGATTATC	9441	False	NA	NA	False	AATAAA	-24	NA	85131504	85137096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_85131500_85137100
ES.8097.1	chr12	+	4385	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	0	-1621	0	864	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAGTGGTACAACCGC	NA	False	NA	16	True	AATAAA	-26	NA	85157606	85182483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.11	chr12	+	2928	15	NNC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	4	-5	intron_retention	FALSE	canonical	2	4	junction_9	119.53711745303	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGCTCCGGGATCTG	NA	False	NA	15	True	ATTAAA	-15	NA	85157635	85180857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85172771_85172858_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.12	chr12	+	1523	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	47	1194	-13	230	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCGTTCACAAGTCTG	NA	False	NA	NA	False	NA	NA	NA	85157653	85179668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.15	chr12	+	2702	14	NNC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.6372201321827	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTCCGGGATCTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	85157656	85180860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85157758_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.16	chr12	+	2647	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	18	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	93.3796095477484	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGCTCCGGGATCTG	NA	False	NA	15	True	ATTAAA	-15	NA	85157684	85180857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85157734_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.17	chr12	+	3104	14	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	201	-3	141	1	3prime_fragment	FALSE	canonical	3	294	junction_6	24.3483107563213	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGGATCTGTGCTCCTT	NA	False	NA	23	True	ATTAAA	-23	NA	85157807	85180865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.19	chr12	+	1712	1	FSM	ENSMUSG00000004789.11	ENSMUST00000223415.2	3220	1	1508	0	1473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-11	NA	85159139	85160851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85159100_85160900
ES.8097.2	chr12	+	2766	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	1	-3	1	1	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGGATCTGTGCTCCTT	NA	False	NA	23	True	ATTAAA	-23	NA	85157607	85180865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.20	chr12	+	1244	9	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	8463	1060	1236	364	3prime_fragment	FALSE	canonical	3	294	junction_1	24.6902688320723	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTCCTCTACAAAGG	NA	False	NA	NA	False	NA	NA	NA	85166069	85179802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.21	chr12	+	4646	8	ISM	ENSMUSG00000004789.11	ENSMUST00000221357.2	2259	16	10373	-857	-2584	857	intron_retention	FALSE	canonical	3	302	junction_2	21.7180447874056	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCGTCTTAAGTGGTA	NA	False	NA	9	True	AATAAA	-19	NA	85167983	85182476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.22	chr12	+	2654	5	NNC	ENSMUSG00000004789.11	novel	732	5	NA	NA	-158	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	150.296997641337	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAACAGGGCTCCGGGA	NA	False	NA	11	True	ATTAAA	-11	NA	85174353	85180853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179387
ES.8097.3	chr12	+	2695	15	NNC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	91.5359860092952	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	22	True	ATTAAA	-22	NA	85157612	85180864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175149_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.4	chr12	+	2867	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	3	-2	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTCCGGGATCTGTGC	NA	False	NA	18	True	ATTAAA	-18	NA	85157613	85180860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.6	chr12	+	3522	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	7	-765	3	8	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTAGCTGTTCTGTTTT	NA	False	NA	NA	False	ACTAAA	-5	NA	85157613	85181627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.7	chr12	+	2652	13	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	96.3245382374951	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGCTCCGGGATCTG	NA	False	NA	15	True	ATTAAA	-15	NA	85157630	85180857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85157734_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8097.8	chr12	+	3728	1	FSM	ENSMUSG00000004789.11	ENSMUST00000223415.2	3220	1	-1	-507	-1	507	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	85157630	85161358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85157600_85161400
ES.8097.9	chr12	+	4475	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	867	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTACAACCGCATT	NA	False	NA	19	True	AATAAA	-29	NA	85157631	85182486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ES.8098.1	chr12	-	157	1	Intergenic	novelGene_6697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	1149	False	NA	NA	False	NA	NA	NA	85176148	85175991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85176000_85176100
ES.8099.1	chr12	-	2839	11	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	69.8037248289803	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGCATCATTAATATA	NA	False	NA	0	True	AATAAA	-19	NA	85198000	85182020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187645_85193636_85193730_85194519_85194645_85196397_85196683_85197936
ES.8099.10	chr12	-	2678	5	NNC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-473	-38	intron_retention	FALSE	canonical	1	1	junction_4	66.0619973963852	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTGGCTCTCCTGTGT	618	False	NA	-47	True	AATAAA	-12	NA	85187236	85182451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185735_85185851
ES.8099.11	chr12	-	2398	11	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	234	-123	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	70.1923072708114	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCCAGTGTGTTTAAGA	NA	False	NA	-16	True	AATAAA	-13	NA	85197776	85182536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187651_85193636_85193730_85194519_85194645_85196397_85196670_85197630
ES.8099.13	chr12	-	3713	8	NIC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	1	-124	intron_retention	FALSE	canonical	2	3	junction_4	72.9201408307438	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCCAGTGTGTTTAAG	NA	False	NA	-17	True	AATAAA	-12	NA	85198023	85182537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85187651_85193636_85193730_85194519_85194645_85196397_85196683_85197936
ES.8099.14	chr12	-	1627	6	NNC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-473	-125	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	62.6909881880961	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCCAGTGTGTTTAA	618	False	NA	-18	True	AATAAA	-11	NA	85187236	85182538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851_85186369_85187117
ES.8099.15	chr12	-	2396	12	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-4	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	69.8027918644098	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAGCCAGTGTGTTT	NA	False	NA	-20	True	AATAAA	-9	NA	85198014	85182540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117_85187251_85187602_85187645_85188379_85188443_85193636_85193730_85194519_85194645_85196397_85196683_85197936
ES.8099.16	chr12	-	1893	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-130	-127	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	58.2319499931095	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAGCCAGTGTGTTT	961	False	NA	-20	True	AATAAA	-9	NA	85186893	85182540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85186577
ES.8099.18	chr12	-	2087	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-452	-127	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	57.8363207681817	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAGCCAGTGTGTTT	639	False	NA	-20	True	AATAAA	-9	NA	85187215	85182540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186855_85187117
ES.8099.2	chr12	-	2539	5	NIC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-463	0	intron_retention	FALSE	canonical	3	114	junction_4	18.2071414560331	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTTGCATCATTAATA	628	False	NA	-2	True	AATAAA	-17	NA	85187226	85182022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85186443_85187117
ES.8099.3	chr12	-	1879	6	ISM	ENSMUSG00000019235.10	ENSMUST00000221972.2	2881	11	10790	347	-485	38	3prime_fragment	FALSE	canonical	3	114	junction_5	16.4073154415949	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTATGAGCTTCTAT	606	False	NA	35	True	NA	NA	NA	85187248	85182369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186443_85187117
ES.8099.5	chr12	-	1794	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-472	-34	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	60.2109624570144	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCTGTGTCAGA	619	False	NA	-43	True	AATAAA	-16	NA	85187235	85182447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186449_85187117
ES.8099.7	chr12	-	2770	10	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	1	-34	intron_retention	FALSE	canonical	0	0	junction_6	69.9682467663408	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCTGTGTCAGA	NA	False	NA	-43	True	AATAAA	-16	NA	85198023	85182447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85186443_85187117_85187251_85187602_85187645_85193636_85193730_85194519_85194645_85196397_85196683_85197936
ES.8099.8	chr12	-	1768	6	NNC	ENSMUSG00000019235.10	novel	2881	11	NA	NA	-484	-34	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	53.0938791199136	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCTCTCCTGTGTCAGA	607	False	NA	-43	True	AATAAA	-16	NA	85187247	85182447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185517_85185851_85186411_85187117
ES.8099.9	chr12	-	4379	3	NIC	ENSMUSG00000019235.10	novel	2034	5	NA	NA	-466	-36	intron_retention	FALSE	canonical	3	158	junction_1	0.5	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTCTCCTGTGTCA	625	False	NA	-45	True	AATAAA	-14	NA	85187229	85182449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85183258_85183519_85185288_85185426
ES.81.1	chr1	-	3996	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	5	14	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	5.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCGTGTCTGTGACCA	-15	True	NA	NA	False	AATAAA	-31	NA	10038152	10030373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10033747_10037323_10037743_10037948
ES.81.2	chr1	-	3997	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	6	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTTAACTCTGC	-8	True	NA	NA	False	AATAAA	-17	NA	10038145	10030387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10033747_10037323_10037743_10037926
ES.81.3	chr1	-	7567	2	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	13	2	intron_retention	FALSE	canonical	2	9	junction_1	0	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATCTGTGTCTGTTAA	-7	True	NA	NA	False	AATAAA	-11	NA	10038144	10030393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10037743_10037926
ES.81.4	chr1	-	967	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	-2	-3050	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTCATTGTGCCAATA	-22	True	NA	NA	False	AATAAA	-43	NA	10038159	10033445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10033761_10037323_10037743_10037926
ES.81.5	chr1	-	903	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	11	-3065	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	5.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATAGCTTATTTA	-9	True	NA	NA	False	AATAAA	-28	NA	10038146	10033460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10033747_10037323_10037743_10037948
ES.81.6	chr1	-	4091	2	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	23	-3442	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGTATCTTGAAGTTTA	3	True	NA	NA	False	AATAAA	-12	NA	10038134	10033837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10037743_10037948
ES.810.1	chr1	+	4750	1	Genic_Genomic	ENSMUSG00000032968.5	novel	NA	NA	NA	NA	-1473	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTTGTATGTGTTC	2686	False	NA	NA	False	AATAAA	-12	NA	75482247	75486997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_75482200_75487000
ES.8100.3	chr12	-	1591	7	FSM	ENSMUSG00000004791.8	ENSMUST00000004913.7	1582	7	-18	9	-18	-9	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAACCAACATGTCTAG	NA	False	NA	NA	False	AATAAA	-10	NA	85224088	85213421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222529_85222570_85223671
ES.8100.4	chr12	-	125	1	Intergenic	novelGene_6698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	85216018	85215893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85215900_85216000
ES.8101.1	chr12	+	1467	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	6	132	6	3	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTTTATTGTTCTGA	NA	False	NA	34	True	AATAAA	-19	NA	85266260	85273270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.10	chr12	+	2186	1	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	253	-806	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	85266608	85268794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85266600_85268800
ES.8101.11	chr12	+	3314	1	Genic_Genomic	ENSMUSG00000004788.12	novel	NA	NA	NA	NA	898	2109	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAGTGTGATGTAAAGTG	NA	False	NA	NA	False	AAAACA	-30	NA	85272197	85275511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_85272200_85275500
ES.8101.2	chr12	+	1481	8	NNC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.048871212033	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTCGTTTATTGTTCT	NA	False	NA	32	True	AATAAA	-17	NA	85266262	85273268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85266499_85266595_85266735_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.3	chr12	+	1420	8	NNC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.048871212033	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGTTCGTTTATTGTT	NA	False	NA	30	True	AATAAA	-15	NA	85266262	85273266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85266499_85266595_85266676_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.4	chr12	+	1450	8	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-9	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	119.526446565484	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCGTTTATTGTTCTGA	NA	False	NA	34	True	AATAAA	-19	NA	85266268	85273270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.5	chr12	+	1591	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	14	0	-9	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAAAGGGCCCCAAAC	NA	False	NA	NA	False	AATAAA	-21	NA	85266268	85273402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.6	chr12	+	1536	7	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	336	junction_6	13.6188186793944	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266285	85273267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.7	chr12	+	1593	7	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	336	junction_6	14.2097384446958	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266285	85273267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85266499_85266595_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.8	chr12	+	1248	7	NNC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	132.648658744319	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGTTCGTTTATTGTT	NA	False	NA	30	True	AATAAA	-15	NA	85266285	85273266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85266499_85266595_85266676_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ES.8101.9	chr12	+	1163	6	NIC	ENSMUSG00000004788.12	novel	957	7	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	1	9	junction_4	133.985670875657	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTCAAGTTCGTTTA	NA	False	NA	25	True	AATAAA	-10	NA	85266321	85273261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85271328_85271396_85272776
ES.8102.1	chr12	+	183	1	Intergenic	novelGene_6699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGGAAAGACGTT	NA	False	NA	NA	False	NA	NA	NA	85325383	85325566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85325400_85325600
ES.8103.1	chr12	-	5653	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	-37	-917	-37	57	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAATGCATCATTTAT	NA	False	NA	NA	False	TATAAA	-21	NA	85317410	85281236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ES.8103.10	chr12	-	6594	10	NIC	ENSMUSG00000021245.16	novel	5463	12	NA	NA	1491	32	intron_retention	FALSE	canonical	3	46	junction_9	14.9220195237329	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGCTTCTGTGAAAT	NA	False	NA	NA	False	ACTAAA	-39	NA	85315874	85281261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85307679_85308434_85308527_85312925
ES.8103.11	chr12	-	5552	13	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.3258568567072	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	85317372	85281293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292542_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ES.8103.12	chr12	-	5410	12	NNC	ENSMUSG00000021245.16	novel	5420	12	NA	NA	582	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.1640257973788	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85316783	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85316766
ES.8103.14	chr12	-	5643	12	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.8618974538279	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317407	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287666_85292533_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317247
ES.8103.15	chr12	-	6291	11	NIC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	1849	0	intron_retention	FALSE	canonical	3	35	junction_10	20.1385203031404	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85315516	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85307679_85308434_85308527_85309540_85309637_85312925
ES.8103.16	chr12	-	5427	12	FSM	ENSMUSG00000021245.16	ENSMUST00000166821.8	5420	12	-7	0	1	0	multi-exon	FALSE	canonical	1	1	junction_11	26.9149256573466	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317372	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317338
ES.8103.17	chr12	-	2693	12	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	-468	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.6761077853942	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85313526	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284367_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925
ES.8103.18	chr12	-	2201	12	NNC	ENSMUSG00000021245.16	novel	5463	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	25.9082934486525	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317371	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85316176_85316249_85317312
ES.8103.19	chr12	-	7376	13	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	3	0	intron_retention	FALSE	canonical	3	14	junction_11	90.6283620066037	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	4311	False	NA	NA	False	AATAAA	-6	NA	85327189	85281302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85326764_85326857_85327083
ES.8103.2	chr12	-	5560	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	-40	-57	-40	57	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAATGCATCATTTAT	NA	False	NA	NA	False	TATAAA	-21	NA	85317413	85281236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
ES.8103.20	chr12	-	4740	13	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	9	6	multi-exon	FALSE	canonical	3	14	junction_11	88.6954840388669	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGGCTTATGTTTGA	4317	False	NA	NA	False	GATAAA	-21	NA	85327183	85282147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85326764_85326857_85327083
ES.8103.21	chr12	-	4605	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	1	857	1	3	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGAGTTGGCTTATGTT	NA	False	NA	NA	False	GATAAA	-18	NA	85317372	85282150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
ES.8103.22	chr12	-	4640	12	NNC	ENSMUSG00000021245.16	novel	5463	12	NA	NA	23	3	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	24.7105558465999	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGAGTTGGCTTATGTT	NA	False	NA	NA	False	GATAAA	-18	NA	85317342	85282150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317247
ES.8103.23	chr12	-	4736	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	-34	-3	-34	3	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGAGTTGGCTTATGTT	NA	False	NA	NA	False	GATAAA	-18	NA	85317407	85282150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ES.8103.24	chr12	-	3631	8	NNC	ENSMUSG00000021245.16	novel	2052	10	NA	NA	2137	-13936	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.4112861058938	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGACCACATAGTTTCTC	NA	False	NA	NA	False	AATAAA	-1	NA	85315228	85296089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85296486_85296533_85296584_85296631_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925
ES.8103.25	chr12	-	5195	7	NNC	ENSMUSG00000021245.16	novel	2052	10	NA	NA	-18	-20531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.8193607763176	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGATTGAACCTGCTCA	NA	False	NA	NA	False	AATAAA	-21	NA	85317391	85302684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85304112_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ES.8103.26	chr12	-	3986	2	ISM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	2	30168	2	-30168	5prime_fragment	FALSE	canonical	3	64	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGCTAGAAGACACACAG	NA	False	NA	NA	False	AATAAA	-14	NA	85317371	85312321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85316249_85317312
ES.8103.28	chr12	-	638	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	7	3	7	-3	multi-exon	FALSE	canonical	3	386	junction_2	28.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATTGCTTCCCCCCCTC	4298	False	NA	-3	True	AATAAA	-21	NA	85327202	85319174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85319602_85326764_85326857_85327083
ES.8103.29	chr12	-	7969	1	NIC	ENSMUSG00000008822.16	novel	648	3	NA	NA	43	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTTACATTGCTTCCC	4351	False	NA	-9	True	AATAAA	-15	NA	85327149	85319180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85319200_85327100
ES.8103.3	chr12	-	5583	12	NNC	ENSMUSG00000021245.16	novel	5463	12	NA	NA	0	55	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	24.7105558465999	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAGAATGCATCATTT	NA	False	NA	NA	False	TATAAA	-19	NA	85317373	85281238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317247
ES.8103.30	chr12	-	510	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	14	124	-3	25	multi-exon	FALSE	canonical	3	386	junction_2	28.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATTTGTTAGTAAG	4305	False	NA	NA	False	ATTAAA	-28	NA	85327195	85319295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85319602_85326764_85326857_85327083
ES.8103.4	chr12	-	5658	13	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	12	54	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_12	26.2519840520039	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATGCATCATT	NA	False	NA	NA	False	TATAAA	-18	NA	85317353	85281239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317247
ES.8103.5	chr12	-	5758	14	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	-5	54	multi-exon	FALSE	canonical	3	14	junction_12	87.0928906262339	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATCAGAATGCATCATT	4303	False	NA	NA	False	TATAAA	-18	NA	85327197	85281239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85326764_85326857_85327083
ES.8103.6	chr12	-	5247	12	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	-1584	53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.2609065291928	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATCAGAATGCATCAT	NA	False	NA	NA	False	TATAAA	-17	NA	85314642	85281240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85310939_85312925
ES.8103.7	chr12	-	8977	12	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	1	52	intron_retention	FALSE	canonical	0	0	junction_11	32.6304122200884	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATCAGAATGCATCA	4309	False	NA	NA	False	TATAAA	-16	NA	85327191	85281241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85294498_85297075_85297148_85305966_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85326764_85326857_85327079
ES.8103.8	chr12	-	5591	12	NNC	ENSMUSG00000021245.16	novel	4699	13	NA	NA	6	52	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	29.2667978184402	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATCAGAATGCATCA	NA	False	NA	NA	False	TATAAA	-16	NA	85317359	85281241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85282504_85284288_85284441_85287571_85287666_85292533_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ES.8103.9	chr12	-	5681	13	Fusion	ENSMUSG00000008822.16_ENSMUSG00000021245.16	novel	4699	13	NA	NA	-10	51	multi-exon	FALSE	canonical	3	14	junction_11	88.6954840388669	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTATATCAGAATGCATC	4281	False	NA	NA	False	TATAAA	-15	NA	85327219	85281242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85326764_85326857_85327083
ES.8104.1	chr12	+	1999	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	66	2417	66	-5	multi-exon	FALSE	canonical	1	1	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACCATGGTTTGTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	85335430	85343715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85335560_85336325_85337656_85343175
ES.8104.2	chr12	+	3610	2	ISM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	99	6293	99	2160	5prime_fragment	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGAGTACTCTAT	NA	False	NA	NA	False	NA	NA	NA	85335463	85339839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85335560_85336325
ES.8104.3	chr12	+	2355	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	109	2018	109	394	multi-exon	FALSE	canonical	1	1	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAAGAAGTGGCTGGTA	NA	False	NA	NA	False	TTTAAA	-16	NA	85335473	85344114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85335560_85336325_85337656_85343175
ES.8104.4	chr12	+	2357	3	NNC	ENSMUSG00000045064.6	novel	4482	3	NA	NA	120	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACCATGGTTTGTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	85335484	85343715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85335972_85336325_85337656_85343175
ES.8104.5	chr12	+	3568	2	ISM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	1679	1	1679	-1	3prime_fragment	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTCTTGTGTCATT	NA	False	NA	NA	False	AAAACA	-18	NA	85337043	85346131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85337656_85343175
ES.8105.1	chr12	+	2248	3	Antisense	novelGene_ENSMUSG00000034290.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85371667	85378275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_85372146_85374161_85374274_85376617
ES.8106.1	chr12	-	3143	1	Genic_Genomic	ENSMUSG00000034290.10	novel	NA	NA	NA	NA	38572	1866	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGAACTTGCCTGGGGG	3577	False	NA	NA	False	AATAAA	-17	NA	85347564	85344421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_85344400_85347600
ES.8106.12	chr12	-	4928	5	NIC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	30474	-3	intron_retention	FALSE	canonical	3	86	junction_3	6.74536878161602	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGAGGGCTGTGTTTGA	NA	False	NA	-6	True	AATAAA	-12	NA	85355662	85346290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85348701_85350240_85352399_85352910_85353141_85354703_85354764_85355592
ES.8106.15	chr12	-	5228	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-23	181	-23	-181	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGCAGTGCTCTGTGTT	7934	False	NA	NA	False	NA	NA	NA	85386159	85346468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.16	chr12	-	3232	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	332	1822	332	-1822	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATTCATGCCCTCTC	8289	False	NA	NA	False	TATAAA	-36	NA	85385804	85348109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.17	chr12	-	3426	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-12	1972	-12	-1972	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCACTGGTAGCAGCT	7945	False	NA	NA	False	NA	NA	NA	85386148	85348259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.18	chr12	-	5269	13	NIC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	8765	-5206	intron_retention	FALSE	canonical	3	74	junction_12	10.5944823165436	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTGGTTGGAGGTTA	NA	False	NA	NA	False	NA	NA	NA	85377371	85351493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85353141_85354703_85354764_85355592_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617
ES.8106.19	chr12	-	3530	20	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-22	5207	-22	-5207	5prime_fragment	FALSE	canonical	3	74	junction_14	9.76170367946916	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGTGGTTGGAGGTT	7935	False	NA	NA	False	NA	NA	NA	85386158	85351494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.2	chr12	-	5555	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-22	-147	-22	147	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTACACGGAAATAAT	7935	False	NA	NA	False	AATAAA	-37	NA	85386158	85346140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.20	chr12	-	5108	9	NIC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	-12	-19952	intron_retention	FALSE	canonical	3	74	junction_4	7.14033437592386	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	7945	False	NA	NA	False	NA	NA	NA	85386148	85366239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.21	chr12	-	172	1	Intergenic	novelGene_6700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	85380149	85379977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85380000_85380100
ES.8106.3	chr12	-	5422	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	-25	-11	-25	11	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGTAAGCCTGTCTAC	7932	False	NA	8	True	AATAAA	-26	NA	85386161	85346276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.4	chr12	-	5206	22	NNC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	23.1693949355179	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7935	False	NA	-3	True	AATAAA	-15	NA	85386158	85346287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385978
ES.8106.5	chr12	-	5221	21	NIC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.3008802635009	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7960	False	NA	-3	True	AATAAA	-15	NA	85386133	85346287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85348701_85350240_85350448_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.7	chr12	-	4998	19	NIC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.8981257661429	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7952	False	NA	-3	True	AATAAA	-15	NA	85386141	85346287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8106.9	chr12	-	5958	23	NNC	ENSMUSG00000034290.10	novel	5386	22	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	28.9289525825022	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7960	False	NA	-3	True	AATAAA	-15	NA	85386133	85346287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85378602_85379178_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ES.8107.1	chr12	+	2495	1	Genic_Genomic	ENSMUSG00000113488.2	novel	NA	NA	NA	NA	-1912	-1933	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCGCCGGAACCGGGAGC	NA	False	NA	NA	False	NA	NA	NA	85418978	85421473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_85419000_85421500
ES.8108.1	chr12	-	2213	1	Genic_Genomic	ENSMUSG00000021248.10	novel	NA	NA	NA	NA	9039	945	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCCTGCCCAACAAGCC	8823	False	NA	NA	False	NA	NA	NA	85388655	85386442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_85386400_85388700
ES.8108.10	chr12	-	1387	6	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	660.274609537577	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTCCTTGTGTATG	8605	False	NA	-8	True	ATTAAA	-17	NA	85421480	85389564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85390324_85390998_85391126_85392278_85392328_85397576_85397651_85401568_85401681_85421214
ES.8108.12	chr12	-	1267	5	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	581.537778222533	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTGAAGTCCTTGTG	8619	False	NA	-12	True	ATTAAA	-13	NA	85421466	85389568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85390324_85390998_85391126_85397576_85397607_85401577_85401681_85421214
ES.8108.14	chr12	-	992	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	129	361	-28	216	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACGCCAAAGCCAGCCTT	8593	False	NA	NA	False	NA	NA	NA	85421492	85389922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ES.8108.15	chr12	-	4379	2	Genic_Genomic	ENSMUSG00000021248.10	novel	1482	5	NA	NA	1	2088	multi-exon	TRUE	canonical	0	0	junction_1	0	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCTTTGTAGAACAAG	8622	False	NA	NA	False	NA	NA	NA	85421463	85417015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_85417950_85418018
ES.8108.16	chr12	-	2394	1	FSM	ENSMUSG00000021248.10	ENSMUST00000223375.2	2361	1	-32	-1	-32	1	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8589	False	NA	NA	False	AATGAA	-15	NA	85421496	85419102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85419100_85421500
ES.8108.2	chr12	-	3527	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	129	-2174	-28	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTGTATTTGTCTGT	8593	False	NA	-1	True	AATAAA	-16	NA	85421492	85387387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ES.8108.3	chr12	-	3461	6	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	534.282097772328	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGAGGTGTATTTGTCTG	8618	False	NA	-2	True	AATAAA	-15	NA	85421467	85387388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85389182_85389221_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ES.8108.5	chr12	-	3512	5	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	558.623755313001	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTGAGGTGTATTTGT	8598	False	NA	-5	True	AATAAA	-12	NA	85421487	85387391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85390324_85390998_85391126_85397576_85397645_85401568_85401681_85421214
ES.8108.7	chr12	-	1360	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	124	-2	-33	2	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTGTGTATGTGTGT	8588	False	NA	-3	True	ATTAAA	-22	NA	85421497	85389559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ES.8108.8	chr12	-	1287	5	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	581.537778222533	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTGTGTATGTGTGT	8625	False	NA	-3	True	ATTAAA	-22	NA	85421460	85389559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85390324_85390998_85391126_85397576_85397615_85401568_85401681_85421214
ES.8108.9	chr12	-	1328	5	NNC	ENSMUSG00000021248.10	novel	1482	5	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	576.290942146413	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	8605	False	NA	-5	True	ATTAAA	-20	NA	85421480	85389561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85390324_85391011_85391126_85397576_85397651_85401568_85401681_85421214
ES.8109.1	chr12	-	945	1	Intergenic	novelGene_6701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGATCTGACCTTTG	3750	False	NA	NA	False	NA	NA	NA	85426335	85425390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85425400_85426300
ES.811.1	chr1	-	3103	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000079205.14	2892	4	-208	-3	-172	3	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAACTGGTAATTTAGT	NA	False	NA	NA	False	AATAAA	-23	NA	75456123	75451209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ES.811.10	chr1	-	7509	18	NIC	ENSMUSG00000026211.19	novel	5679	20	NA	NA	-43	2	intron_retention	FALSE	canonical	0	0	junction_5	17.6297954775804	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTGTGTGCCACGAAA	NA	False	NA	NA	False	AATAAA	-23	NA	75483048	75462466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75462604_75463283_75463554_75463866_75463972_75464272_75464435_75464549_75464707_75465232_75466394_75467439_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.12	chr1	-	7318	18	NNC	ENSMUSG00000026211.19	novel	5679	20	NA	NA	-28	-9	intron_retention	FALSE	canonical	0	0	junction_1	18.3270934122456	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCCACACCTGTCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	75483033	75462477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75462604_75463279_75463554_75463866_75463972_75464272_75464435_75464549_75464707_75465232_75466394_75467439_75468987_75469149_75469438_75469682_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.13	chr1	-	3988	14	NNC	ENSMUSG00000026211.19	novel	5679	20	NA	NA	-5564	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.6277771846304	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTATTTATTTTTTGA	NA	False	NA	NA	False	CATAAA	-20	NA	75488660	75467176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75467713_75467831_75468102_75468926_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75488316
ES.811.15	chr1	-	5216	13	NIC	ENSMUSG00000026211.19	novel	4131	12	NA	NA	2	0	intron_retention	FALSE	canonical	1	1	junction_1	17.8891261198901	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75483094	75467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75468102_75468710_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.16	chr1	-	4981	12	FSM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-850	0	-39	0	multi-exon	FALSE	canonical	1	1	junction_1	17.2564516621159	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75483135	75467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.17	chr1	-	4760	13	ISM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	-28	4709	-28	0	5prime_fragment	FALSE	canonical	1	1	junction_1	17.9969133155908	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75483033	75467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.18	chr1	-	4335	11	NIC	ENSMUSG00000026211.19	novel	4131	12	NA	NA	-34	0	intron_retention	FALSE	canonical	1	2	junction_1	17.5045708316428	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75480358	75467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340
ES.811.19	chr1	-	4860	14	NNC	ENSMUSG00000026211.19	novel	5679	20	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.8416007058786	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75483026	75467177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75467713_75467831_75468102_75468710_75468987_75469149_75469438_75469682_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.2	chr1	-	3527	4	Fusion	ENSMUSG00000032997.17_ENSMUSG00000026211.19	novel	2892	4	NA	NA	45	3	intron_retention	FALSE	canonical	1	1	junction_3	53.5433365498349	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAGTGGAAACTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	75464401	75451215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_75452871_75453203_75453384_75453888_75454463_75463283
ES.811.20	chr1	-	5538	11	NIC	ENSMUSG00000026211.19	novel	4131	12	NA	NA	-13	-5	intron_retention	FALSE	canonical	0	0	junction_7	18.5819805187714	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTCTCTGTATTTATT	NA	False	NA	NA	False	CATAAA	-14	NA	75483109	75467182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.21	chr1	-	2784	5	NNC	ENSMUSG00000026211.19	novel	4131	12	NA	NA	-2268	-7	intron_retention	FALSE	canonical	0	0	junction_4	3.03108891324554	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACTCTCTGTATTTA	7417	False	NA	NA	False	CATAAA	-12	NA	75471979	75467184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75471834
ES.811.22	chr1	-	3833	13	NIC	ENSMUSG00000026211.19	novel	5679	20	NA	NA	-267	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	18.4411601828326	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACTCTCTGTATTTA	NA	False	NA	NA	False	CATAAA	-12	NA	75480591	75467184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75467713_75467831_75468102_75468710_75468987_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340
ES.811.23	chr1	-	5638	11	NNC	ENSMUSG00000026211.19	novel	4131	12	NA	NA	84	-8	intron_retention	FALSE	canonical	1	1	junction_1	16.9885255393162	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAAACTCTCTGTATTT	NA	False	NA	NA	False	CATAAA	-11	NA	75482921	75467185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75469438_75469682_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.24	chr1	-	3553	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	-163	-11	-72	11	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCAATTAGGGTCCAG	NA	False	NA	NA	False	AATAAA	-37	NA	75483168	75472968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.25	chr1	-	3432	9	NNC	ENSMUSG00000026211.19	novel	3379	9	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.6467715962421	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAAATAAGTTCAATTAG	NA	False	NA	NA	False	AATAAA	-30	NA	75483032	75472975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75473291_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.26	chr1	-	3852	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-807	5799	4	3	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGTAAATAAGTTCAATTA	NA	False	NA	NA	False	AATAAA	-29	NA	75483092	75472976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ES.811.27	chr1	-	2703	8	NNC	ENSMUSG00000026211.19	novel	3379	9	NA	NA	-5616	0	intron_retention	FALSE	canonical	1	1	junction_7	15.2636690162207	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGGTAAATAAGTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	75488712	75472980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480611_75488316
ES.811.28	chr1	-	2639	9	NNC	ENSMUSG00000026211.19	novel	3379	9	NA	NA	-5630	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	14.5296034013321	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGGTAAATAAGTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	75488726	75472980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75488316
ES.811.29	chr1	-	2748	8	NNC	ENSMUSG00000026211.19	novel	3379	9	NA	NA	-5362	-6	intron_retention	FALSE	canonical	1	1	junction_7	14.1464641864881	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACCTCATGGTAAATA	NA	False	NA	NA	False	AATAAA	-19	NA	75488458	75472986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75488316
ES.811.3	chr1	-	4064	3	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000143496.8	3333	3	-730	-1	-169	0	multi-exon	FALSE	canonical	3	112	junction_1	2.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75456120	75451218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75452871_75453203_75453384_75453888
ES.811.30	chr1	-	593	2	Antisense	novelGene_ENSMUSG00000032968.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTTTATCTTGGCTCAT	NA	False	NA	NA	False	NA	NA	NA	75488625	75485448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75485733_75488316
ES.811.4	chr1	-	3095	3	NIC	ENSMUSG00000032997.17	novel	2892	4	NA	NA	-29	0	intron_retention	FALSE	canonical	3	116	junction_2	0.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455792	75451219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_75453384_75453888_75454463_75455435
ES.811.5	chr1	-	2873	4	Fusion	ENSMUSG00000032997.17_ENSMUSG00000026211.19	novel	2455	4	NA	NA	-25	0	multi-exon	FALSE	canonical	0	0	junction_3	54.0144013718152	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455976	75451219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_-_75452871_75453203_75453384_75453888_75454463_75455508
ES.811.6	chr1	-	4434	2	ISM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000094818.4	3065	5	-35	1	-35	0	intron_retention	FALSE	canonical	3	112	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455986	75451219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_75452871_75453203
ES.811.7	chr1	-	2904	5	FSM	ENSMUSG00000032997.17	ENSMUST00000094818.4	3065	5	160	1	-28	0	multi-exon	FALSE	canonical	1	2	junction_3	56.2777709224521	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455791	75451219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75454913_75455057_75455435
ES.811.8	chr1	-	2672	4	FSM	ENSMUSG00000032997.17_ENSMUSG00000026211.19	ENSMUST00000138683.2	2455	4	-217	0	-29	0	multi-exon	FALSE	canonical	1	2	junction_3	53.0722777603022	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455980	75451219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_75452871_75453203_75453384_75453888_75454185_75455435
ES.811.9	chr1	-	3534	1	Genic_Genomic	ENSMUSG00000026211.19	novel	NA	NA	NA	NA	1358	-3032	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTCGAAGTTGAGTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	75462519	75458985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_75459000_75462500
ES.8110.1	chr12	-	400	1	Intergenic	novelGene_6702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCATTGTATGAGAAG	NA	False	NA	NA	False	NA	NA	NA	85438584	85438184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85438200_85438600
ES.8111.1	chr12	+	943	1	Intergenic	novelGene_6703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCTTA	NA	False	NA	NA	False	GGGGCT	-21	NA	85502351	85503294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85502400_85503300
ES.8112.1	chr12	-	187	1	Intergenic	novelGene_6704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAATAAA	NA	False	NA	24	True	NA	NA	NA	85556677	85556490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85556500_85556700
ES.8113.1	chr12	+	2480	2	ISM	ENSMUSG00000114163.2	ENSMUST00000220590.2	1057	3	8751	-1213	8751	1213	3prime_fragment	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGTTCGCAGT	NA	False	NA	NA	False	NA	NA	NA	85585122	85590267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85585536_85588200
ES.8114.1	chr12	-	3049	1	Intergenic	novelGene_6705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGTGTGTGTGTGT	2592	False	NA	NA	False	NA	NA	NA	85596620	85593571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85593600_85596600
ES.8115.1	chr12	-	175	1	Intergenic	novelGene_6706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGTGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	85605246	85605071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85605100_85605200
ES.8116.1	chr12	+	1429	3	NNC	ENSMUSG00000034271.17	novel	1645	4	NA	NA	-654	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.5	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	5596	False	NA	29	True	AGTAAA	-15	NA	85645146	85686647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85645370_85678418_85678524_85685546
ES.8116.10	chr12	+	6136	2	Intergenic	novelGene_6708	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	993	False	NA	NA	False	NA	NA	NA	85687713	85694101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85691665_85691916
ES.8116.11	chr12	+	1663	1	Intergenic	novelGene_6709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTGCAGCGTCGTTC	3481	False	NA	NA	False	NA	NA	NA	85690201	85691864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85690200_85691900
ES.8116.2	chr12	+	1660	4	NNC	ENSMUSG00000034271.17	novel	1645	4	NA	NA	-652	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	98.2886904311308	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	5598	False	NA	29	True	AGTAAA	-15	NA	85645148	85686647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85645370_85654906_85655140_85678418_85678524_85685546
ES.8116.3	chr12	+	1843	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	-196	-2	-196	2	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGAGTGGTGTCTGCC	6054	False	NA	36	True	AGTAAA	-22	NA	85645604	85686654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
ES.8116.4	chr12	+	1822	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-177	-2	-177	2	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGAGTGGTGTCTGCC	6462	False	NA	36	True	AGTAAA	-22	NA	85646012	85686654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
ES.8116.6	chr12	+	1713	4	NNC	ENSMUSG00000034271.17	novel	1643	4	NA	NA	-36	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	86.9597608092387	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	6603	False	NA	29	True	AGTAAA	-15	NA	85646153	85686647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85646389_85654906_85655179_85678418_85678524_85685546
ES.8116.7	chr12	+	1652	4	NNC	ENSMUSG00000034271.17	novel	1643	4	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.7028919674182	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCCTCGAGTGGTGTC	6619	False	NA	32	True	AGTAAA	-18	NA	85646169	85686650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85646389_85654915_85655140_85678418_85678524_85685546
ES.8116.8	chr12	+	5560	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	-17	-3900	-17	3900	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGATTGCAACACTTGAC	6622	False	NA	NA	False	AATAAA	-18	NA	85646172	85690552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
ES.8116.9	chr12	+	5996	2	ISM	ENSMUSG00000034271.17	ENSMUST00000171754.3	1559	4	26837	5	24633	-5	3prime_fragment	FALSE	canonical	3	211	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTGCCTCGAGTGGT	NA	False	NA	29	True	AGTAAA	-15	NA	85673628	85686647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85678524_85685546
ES.8117.1	chr12	-	6719	1	Intergenic	novelGene_6707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85667881	85661162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85661200_85667900
ES.8118.1	chr12	-	180	1	Intergenic	novelGene_6710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAACCCAAACCT	NA	False	NA	NA	False	NA	NA	NA	85717448	85717268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85717300_85717400
ES.8119.1	chr12	+	173	1	Intergenic	novelGene_6711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAATAATACCTG	NA	False	NA	NA	False	NA	NA	NA	85773274	85773447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85773300_85773400
ES.812.1	chr1	+	179	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGGTTT	9297	False	NA	NA	False	NA	NA	NA	75488858	75489037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75488900_75489000
ES.8120.1	chr12	+	202	1	Intergenic	novelGene_6712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGCAAGTCTTGGTGC	NA	False	NA	NA	False	NA	NA	NA	85790952	85791154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85791000_85791200
ES.8121.1	chr12	+	3470	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	-35	0	-35	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	85793277	85860359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ES.8121.2	chr12	+	2353	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	-8	1090	-8	-1090	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTCTTAAGAGCACT	NA	False	NA	NA	False	AAGAAA	-24	NA	85793304	85859269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ES.8121.3	chr12	+	3536	11	NNC	ENSMUSG00000034258.5	novel	3435	10	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.331063085097	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTCATCATTTAGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	85793305	85860360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85794364_85829730_85829873_85830942_85831036_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ES.8121.4	chr12	+	3449	10	NNC	ENSMUSG00000034258.5	novel	3435	10	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	15.7181973646809	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTCATCATTTAGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	85793321	85860360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858793
ES.8121.5	chr12	+	2168	1	NIC	ENSMUSG00000034258.5	novel	3435	10	NA	NA	27	-55641	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAATACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85793339	85795507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85793300_85795500
ES.8121.6	chr12	+	2954	10	NNC	ENSMUSG00000034258.5	novel	3435	10	NA	NA	48	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.3727352040657	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCCTCATCATTTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	85793360	85860358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85793932_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ES.8121.7	chr12	+	3376	10	NNC	ENSMUSG00000034258.5	novel	3435	10	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	15.6773013550731	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGCCTCATCATTTAG	NA	False	NA	NA	False	AATAAA	-12	NA	85793363	85860357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851975_85852026_85858815
ES.8121.8	chr12	+	2386	9	ISM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	36416	0	8125	0	3prime_fragment	FALSE	canonical	3	40	junction_3	4.06009544222793	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	4765	False	NA	NA	False	AATAAA	-14	NA	85829728	85860359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ES.8121.9	chr12	+	174	1	Intergenic	novelGene_6714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATCTCAACGT	NA	False	NA	NA	False	NA	NA	NA	85835529	85835703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85835500_85835700
ES.8122.1	chr12	+	3806	1	Antisense	novelGene_ENSMUSG00000021252.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGCTGTATCCTGTCCT	NA	False	NA	NA	False	ATTAAA	-20	NA	85860413	85864219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_85860400_85864200
ES.8123.1	chr12	+	5326	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	13.5734575973789	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871418	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85872169_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.10	chr12	+	6355	33	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-33	10380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	10.7383657974573	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAACTGTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	85871708	86073206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067267_86067378_86070993
ES.8123.11	chr12	+	4629	32	NIC	ENSMUSG00000012609.20	novel	4147	33	NA	NA	-18	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_31	11.8969736180892	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTGTTTTTTTTCT	NA	False	NA	3	True	AATAAA	-13	NA	85871723	86100531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86099916
ES.8123.12	chr12	+	6811	31	NIC	ENSMUSG00000012609.20	novel	4168	32	NA	NA	-17	-409	intron_retention	FALSE	canonical	1	1	junction_19	12.5330230458045	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTCTAGTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	85871724	86062417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421
ES.8123.14	chr12	+	3871	30	NNC	ENSMUSG00000012609.20	novel	4147	33	NA	NA	-14	27784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	10.8638750551008	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGCTTGGTCTATGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	85871727	86004497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86004228
ES.8123.15	chr12	+	10493	31	NNC	ENSMUSG00000012609.20	novel	4168	32	NA	NA	-7	3380	intron_retention	FALSE	non_canonical	0	0	junction_30	12.6113264788267	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTTCTTATCTTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	85871734	86066206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86064887_86064930
ES.8123.16	chr12	+	5577	28	NIC	ENSMUSG00000012609.20	novel	4147	33	NA	NA	-6	6005	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	11.0700475771682	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCCACATCTGAAAGGTG	NA	False	NA	NA	False	AATAAA	-39	NA	85871735	85982718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055
ES.8123.17	chr12	+	4579	32	NIC	ENSMUSG00000012609.20	novel	4534	33	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	13.0427137871857	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871736	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965746_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.18	chr12	+	4788	35	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	13.7306327901014	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871742	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86091956_86091993_86099916
ES.8123.19	chr12	+	2487	16	NIC	ENSMUSG00000012609.20	novel	4147	33	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	11.7056491585141	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTGCTCATTTACTGT	NA	False	NA	NA	False	AATAAA	-23	NA	85871742	85941518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85940528
ES.8123.2	chr12	+	4991	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	-292	-552	4	0	multi-exon	FALSE	canonical	3	15	junction_32	9.07864940395872	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871450	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.20	chr12	+	6362	34	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	1	10399	combination_of_known_junctions	FALSE	canonical	2	6	junction_28	11.9586830800929	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCAGTGTTCTGGTAT	NA	False	NA	NA	False	NA	NA	NA	85871743	86073225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993
ES.8123.21	chr12	+	4882	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	3	10381	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	12.0261423230209	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAACTGTATTTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	85871745	86073207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86072523
ES.8123.22	chr12	+	4717	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	12.4084156400425	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871759	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86091956_86091993_86099916
ES.8123.23	chr12	+	4916	35	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	2	10378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.6959083823829	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTAACTGTATTTTCT	NA	False	NA	NA	False	NA	NA	NA	85871760	86073204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873403_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969625_85969671_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86072523
ES.8123.24	chr12	+	4651	33	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_32	12.2167917228706	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871760	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86099916
ES.8123.25	chr12	+	4760	34	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	2	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	10.8145737128825	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871760	86100532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965746_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ES.8123.26	chr12	+	4767	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	12.4084156400425	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871760	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067372_86071014_86071117_86099925
ES.8123.27	chr12	+	4720	34	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	11.1666563874793	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871773	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.28	chr12	+	4742	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	12.5189296520386	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871773	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965746_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070999_86071117_86099916
ES.8123.29	chr12	+	2340	13	FSM	ENSMUSG00000012609.20	ENSMUST00000110220.9	2655	13	308	7	-6	-7	multi-exon	FALSE	canonical	1	1	junction_12	13.2350544640612	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGAATTCTTGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	85871788	85931205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85930077
ES.8123.3	chr12	+	5098	34	FSM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	-17	0	-14	0	multi-exon	FALSE	canonical	3	18	junction_33	8.97020883060403	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871466	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ES.8123.30	chr12	+	2222	4	ISM	ENSMUSG00000012609.20	ENSMUST00000124701.8	2165	5	28	0	-26	0	intron_retention	FALSE	canonical	3	41	junction_3	6.34209919681348	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAATATGGTACATT	NA	False	NA	NA	False	NA	NA	NA	85871822	85892456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551
ES.8123.31	chr12	+	4579	31	NNC	ENSMUSG00000012609.20	novel	3999	32	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.7605356583719	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871881	86100532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85872120_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946264_85955566_85955630_85959325_85959365_85964448_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.32	chr12	+	4447	32	NNC	ENSMUSG00000012609.20	novel	4534	33	NA	NA	5413	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.085955839952	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85878670	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85878776_85890551_85890635_85890719_85890773_85892020_85892111_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946264_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.33	chr12	+	5615	2	Intergenic	novelGene_6715	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTTATTGTCAACTCC	NA	False	NA	NA	False	NA	NA	NA	85880153	85886169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85880725_85881125
ES.8123.35	chr12	+	3626	2	NNC	ENSMUSG00000012609.20	novel	699	7	NA	NA	20062	942	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACAGTCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	85893319	85897033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85896640_85896727
ES.8123.36	chr12	+	5929	1	Intergenic	novelGene_6716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTCTTGAAACTTGTA	NA	False	NA	NA	False	NA	NA	NA	85896461	85902390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85896500_85902400
ES.8123.37	chr12	+	3248	22	NNC	ENSMUSG00000012609.20	novel	3005	16	NA	NA	-22594	4328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5383615322139	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTTCTTTTGCCCTT	NA	False	NA	NA	False	NA	NA	NA	85903165	85981041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85903292_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055
ES.8123.38	chr12	+	2918	1	Genic_Genomic	ENSMUSG00000012609.20	novel	NA	NA	NA	NA	-9818	2029	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85915941	85918859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_85915900_85918900
ES.8123.39	chr12	+	4957	21	NNC	ENSMUSG00000012609.20	novel	3005	16	NA	NA	4317	10380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7118999452824	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAACTGTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	85930076	86073206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85930213_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86067294_86067378_86070993
ES.8123.4	chr12	+	4939	34	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.4188458346215	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871565	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85872105_85872169_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.40	chr12	+	4627	17	NIC	ENSMUSG00000012609.20	novel	4534	33	NA	NA	-13169	10380	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	12.914230280973	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAACTGTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	85946164	86073206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85946259_85955566_85955630_85959325_85959365_85964448_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993
ES.8123.42	chr12	+	3056	17	NNC	ENSMUSG00000012609.20	novel	3005	16	NA	NA	-4542	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3688845687478	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85954791	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85954853_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.43	chr12	+	2181	11	NNC	ENSMUSG00000012609.20	novel	3005	16	NA	NA	-4534	4319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.3639187709386	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTTCAGAACACTTTCT	NA	False	NA	NA	False	NA	NA	NA	85954799	85981032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85954853_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055
ES.8123.44	chr12	+	3937	17	NNC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-4456	10379	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	15.6439884620259	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAACTGTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	85954877	86073205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86072455
ES.8123.45	chr12	+	4407	10	ISM	ENSMUSG00000012609.20	ENSMUST00000155448.9	4534	33	83068	117814	-4417	6006	internal_fragment	FALSE	canonical	1	3	junction_3	15.3115787704745	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCACATCTGAAAGGTGG	NA	False	NA	NA	False	AATAAA	-40	NA	85954916	85982719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85955630_85959325_85959365_85964448_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055
ES.8123.46	chr12	+	4390	15	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-3770	10391	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	13.9525434737812	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTATTCTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	85955563	86073217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86067294_86067378_86070993
ES.8123.47	chr12	+	4888	4	ISM	ENSMUSG00000012609.20	ENSMUST00000177168.8	3005	16	9021	115908	3792	7912	internal_fragment	FALSE	canonical	3	42	junction_1	8.16496580927726	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCCAGAAAACAAGAAA	NA	False	NA	NA	False	AATGAA	-45	NA	85973573	85984625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85973680_85976637_85976766_85979498_85979583_85980055
ES.8123.48	chr12	+	1371	1	Intergenic	novelGene_6717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATTTTGTGTGACTAG	NA	False	NA	NA	False	ATTAAA	-28	NA	85981228	85982599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85981200_85982600
ES.8123.49	chr12	+	2389	1	Intergenic	novelGene_6718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGTGATC	2864	False	NA	NA	False	NA	NA	NA	85990831	85993220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_85990800_85993200
ES.8123.5	chr12	+	3560	20	NNC	ENSMUSG00000012609.20	novel	4534	33	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.0770306377584	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871697	86100532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85964485_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.50	chr12	+	1406	4	NNC	ENSMUSG00000012609.20	novel	1039	6	NA	NA	50702	10380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0554457615387	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAACTGTATTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	86059476	86073206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86059637_86067294_86067378_86070993_86071117_86072166
ES.8123.51	chr12	+	1829	4	NNC	ENSMUSG00000012609.20	novel	1039	6	NA	NA	50703	10382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.0554457615387	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTGTATTTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	86059477	86073208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86059637_86067294_86067378_86070993_86071519_86072146
ES.8123.6	chr12	+	960	5	ISM	ENSMUSG00000012609.20	ENSMUST00000176008.8	5482	10	-53	24374	-43	0	5prime_fragment	FALSE	canonical	3	30	junction_4	10.1334840997556	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAATATGGTACATT	NA	False	NA	NA	False	NA	NA	NA	85871698	85892456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020
ES.8123.7	chr12	+	4911	35	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-37	-1	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	10.9918182847131	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	False	NA	4	True	AATAAA	-14	NA	85871704	86100532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85890719_85890773_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ES.8123.8	chr12	+	4683	33	NNC	ENSMUSG00000012609.20	novel	4534	33	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	12.9343293216154	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871705	86100534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946264_85955566_85955630_85959325_85959365_85964448_85964549_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ES.8123.9	chr12	+	4818	33	NIC	ENSMUSG00000012609.20	novel	5081	34	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_18	11.0191594507022	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGTTTTTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	85871706	86100533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ES.8124.1	chr12	-	174	1	Intergenic	novelGene_6713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	85831502	85831328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_85831300_85831500
ES.8125.1	chr12	-	5389	1	Antisense	novelGene_ENSMUSG00000034258.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTTCTCTATTTGATT	NA	False	NA	NA	False	NA	NA	NA	85860324	85854935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_85854900_85860300
ES.8125.10	chr12	-	4693	3	NIC	ENSMUSG00000021252.12	novel	408	4	NA	NA	-327	3	intron_retention	FALSE	canonical	3	716	junction_2	85.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGTACTTTGGCCTT	NA	False	NA	-1	True	AATAAA	-24	NA	85871651	85862218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85866344_85868861_85869023_85871244
ES.8125.11	chr12	-	1022	4	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	367.864407387046	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871310	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85862968_85863089_85863209_85866252_85866344_85871244
ES.8125.12	chr12	-	1562	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-393	0	-365	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871689	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.13	chr12	-	4562	4	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-325	0	intron_retention	FALSE	canonical	3	89	junction_3	348.241295655756	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871649	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85862968_85863089_85866344_85868861_85869019_85871244
ES.8125.14	chr12	-	1295	4	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	716	junction_3	70.2961987276379	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871300	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.16	chr12	-	1135	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	322.533347113132	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871317	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85862631_85862685_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.17	chr12	-	1249	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	397.913357403342	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871290	85862221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85870122_85870209_85871244
ES.8125.2	chr12	-	2408	1	Antisense	novelGene_ENSMUSG00000034258.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAATGTACTTACATTT	NA	False	NA	NA	False	AATATA	-33	NA	85859361	85856953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_85857000_85859400
ES.8125.21	chr12	-	1072	4	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	398.27377518486	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCGTCTGTGTACTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	85871324	85862223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85862968_85866252_85866344_85868861_85869019_85871244
ES.8125.22	chr12	-	6257	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-355	7	-327	-7	intron_retention	FALSE	canonical	3	749	junction_1	35	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGATCCGTCTGTGTA	NA	False	NA	-11	True	AATAAA	-14	NA	85871651	85862228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85862968_85863089_85863209_85866252
ES.8125.23	chr12	-	1137	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-305	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	322.533347113132	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGATCCGTCTGTGTA	NA	False	NA	-11	True	AATAAA	-14	NA	85871629	85862228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85862262_85862619_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.26	chr12	-	3538	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-333	1130	-305	-919	5prime_fragment	FALSE	canonical	3	716	junction_2	85.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTTGAGATTTGTCCT	NA	False	NA	NA	False	AAGAAA	-12	NA	85871629	85863351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85866344_85868861_85869023_85871244
ES.8125.27	chr12	-	5776	2	FSM	ENSMUSG00000021252.12	ENSMUST00000124311.2	3226	2	-31	-2519	-25	-919	multi-exon	FALSE	canonical	3	716	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTTGAGATTTGTCCT	NA	False	NA	NA	False	AAGAAA	-12	NA	85871349	85863351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85869023_85871244
ES.8125.28	chr12	-	3068	2	NIC	ENSMUSG00000021252.12	novel	408	4	NA	NA	-17	-940	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85871341	85863372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85866344_85871244
ES.8125.29	chr12	-	3135	4	NNC	ENSMUSG00000021252.12	novel	408	4	NA	NA	-10	-949	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	384.225917339728	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAACCAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	85871306	85863381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85864539_85864588_85866344_85868861_85869023_85871244
ES.8125.3	chr12	-	5092	4	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	1	3774	intron_retention	FALSE	canonical	3	716	junction_3	70.2961987276379	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTCGGGTGTGGTGGCA	NA	False	NA	NA	False	ATTAAA	-17	NA	85871323	85858447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.30	chr12	-	3085	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-352	1602	-324	-1391	5prime_fragment	FALSE	canonical	3	716	junction_2	85.5	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATTCAAATGGTCAGC	NA	False	NA	NA	False	NA	NA	NA	85871648	85863823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_85866344_85868861_85869023_85871244
ES.8125.4	chr12	-	2845	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	1	1975	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	322.533347113132	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTCCACTTTGAACAATT	NA	False	NA	NA	False	AGTAAA	-1	NA	85871323	85860246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85861058_85861383_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.5	chr12	-	3297	4	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	-7	1971	intron_retention	FALSE	canonical	3	716	junction_3	70.2961987276379	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACGTCCACTTTGAAC	NA	False	NA	NA	False	NA	NA	NA	85871331	85860250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.6	chr12	-	3111	3	NIC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	3	1962	intron_retention	FALSE	canonical	2	6	junction_2	406.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGAGTAAACACGTCC	NA	False	NA	NA	False	NA	NA	NA	85871315	85860259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_85863209_85866252_85866344_85871244
ES.8125.7	chr12	-	3487	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	-356	-1962	-328	1962	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGAGTAAACACGTCC	NA	False	NA	NA	False	NA	NA	NA	85871652	85860259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.8	chr12	-	2199	6	NNC	ENSMUSG00000021252.12	novel	1169	5	NA	NA	1	1935	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	321.746857016506	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAATGAATTAAT	NA	False	NA	NA	False	AATACA	-19	NA	85871323	85860286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85860502_85861433_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ES.8125.9	chr12	-	5937	4	NNC	ENSMUSG00000021252.12	novel	408	4	NA	NA	-3	1935	intron_retention	FALSE	non_canonical	0	0	junction_1	384.225917339728	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAATGAATTAAT	NA	False	NA	NA	False	AATACA	-19	NA	85871289	85860286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_85861058_85861383_85866344_85868861_85869023_85871244
ES.8126.1	chr12	+	1045	8	NIC	ENSMUSG00000007867.10	novel	783	9	NA	NA	-9	0	intron_retention	FALSE	canonical	3	179	junction_5	11.5015526902116	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	False	NA	6	True	AATAAA	-16	NA	86129327	86209232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86208302_86208760_86208824_86208951
ES.8126.2	chr12	+	800	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	-18	1	6	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	False	NA	6	True	AATAAA	-16	NA	86129342	86209232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ES.8126.3	chr12	+	895	9	NNC	ENSMUSG00000007867.10	novel	783	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	65.0661922583457	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	False	NA	6	True	AATAAA	-16	NA	86129356	86209232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86129415_86131758_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ES.8126.4	chr12	+	151	1	Intergenic	novelGene_6719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	86179309	86179460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86179300_86179500
ES.8126.5	chr12	+	668	4	ISM	ENSMUSG00000007867.10	ENSMUST00000220711.2	372	5	21022	-265	21022	-4	3prime_fragment	FALSE	canonical	3	187	junction_3	12.1928941054479	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCATTTCTTCCATTC	NA	False	NA	2	True	AATAAA	-12	NA	86207743	86209228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86207996_86208225_86208302_86208760_86208824_86208951
ES.8127.1	chr12	-	171	1	Intergenic	novelGene_6720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGATGATCT	NA	False	NA	NA	False	NA	NA	NA	86193828	86193657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86193700_86193800
ES.8128.1	chr12	+	1801	4	NNC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	-19	41584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.94422221866655	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGACTGTGTCTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	86216095	86283460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86216220_86216782_86217060_86218765_86218861_86282155
ES.8128.10	chr12	+	4083	3	NIC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	-1	-19406	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTTTTGTAATTTGCGT	NA	False	NA	NA	False	AATAAA	-14	NA	86216113	86222470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86216220_86216782_86217055_86218765
ES.8128.11	chr12	+	4366	12	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	-1	-2	multi-exon	FALSE	canonical	0	0	junction_2	28.3653845615094	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCTTGATATATC	NA	False	NA	NA	False	AATGAA	-21	NA	86216113	86338142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86217163_86217300_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.12	chr12	+	4042	13	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	0	-341	multi-exon	FALSE	canonical	0	0	junction_3	26.0506984338019	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAGAAAATAGAATATTA	NA	False	NA	NA	False	AATAAA	-8	NA	86216114	86337803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86282155_86282213_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.13	chr12	+	4516	9	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	0	-3	multi-exon	FALSE	canonical	1	1	junction_8	30.3188781949465	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTGCTTATGATTGAG	NA	False	NA	0	True	AATAAA	-11	NA	86216114	86338555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86335573
ES.8128.14	chr12	+	4742	12	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	0	2	multi-exon	FALSE	canonical	1	2	junction_3	23.8070758285039	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTATGATTGAGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	86216114	86338560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.15	chr12	+	4062	11	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	4	-165	multi-exon	FALSE	canonical	1	2	junction_3	24.8807154237976	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAATGTCAAAAATTAAG	NA	False	NA	NA	False	TTTAAA	-33	NA	86216118	86337979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.16	chr12	+	1282	3	NIC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	19	-22187	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	2.5	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86216133	86219689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86216220_86216782_86217055_86218765
ES.8128.17	chr12	+	4856	13	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	19	3	multi-exon	FALSE	canonical	0	0	junction_2	27.2838729329658	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATGATTGAGGTCTGT	NA	False	NA	6	True	AATAAA	-17	NA	86216133	86338561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86217167_86217300_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.18	chr12	+	172	1	Intergenic	novelGene_6721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAGTAT	NA	False	NA	NA	False	NA	NA	NA	86223285	86223457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86223300_86223500
ES.8128.19	chr12	+	5541	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-1714	2	-1697	-2	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCTTGATATATC	NA	False	NA	NA	False	AATGAA	-21	NA	86286934	86338142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.2	chr12	+	2955	2	NNC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	-11	-22187	intron_retention	FALSE	canonical	1	1	junction_1	0	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86216103	86219689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86216220_86216850
ES.8128.20	chr12	+	4331	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-21	-481	-4	67	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCCTGAAAAGATTAAGC	NA	False	NA	70	True	NA	NA	NA	86288627	86338625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.21	chr12	+	7151	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-18	-3304	-1	2890	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTCCTGCTACTGAC	NA	False	NA	NA	False	TATAAA	-23	NA	86288630	86341448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.22	chr12	+	6598	4	NIC	ENSMUSG00000021254.10	novel	4355	10	NA	NA	1	2760	intron_retention	FALSE	canonical	1	1	junction_2	23.0988215187606	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGGCAAAACAGTTGT	NA	False	NA	NA	False	NA	NA	NA	86288632	86341318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86288719_86290808_86291481_86328222_86328318_86335573
ES.8128.23	chr12	+	1090	3	NNC	ENSMUSG00000021254.10	novel	3829	9	NA	NA	2	-2368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGAGACCTTGTGTTT	NA	False	NA	NA	False	AATAAA	-45	NA	86288633	86301695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86288719_86290808_86291481_86301362
ES.8128.24	chr12	+	3808	8	NIC	ENSMUSG00000021254.10	novel	4355	10	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	23.4546892748463	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCTGTGTCTTGATAT	NA	False	NA	NA	False	AATGAA	-18	NA	86288633	86338139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86328222_86328318_86335573
ES.8128.25	chr12	+	3515	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	-15	329	2	-329	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATTAAGCACATAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	86288633	86337815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.26	chr12	+	4362	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	4	-11	4	11	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGGTCTGTTATTAAGG	NA	False	NA	14	True	AATAAA	-25	NA	86288635	86338569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.27	chr12	+	3610	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	5	740	5	-326	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAGCACATAAATTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	86288636	86337818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.28	chr12	+	7240	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	5	-2890	5	2890	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTCCTGCTACTGAC	NA	False	NA	NA	False	TATAAA	-23	NA	86288636	86341448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.29	chr12	+	3641	6	NIC	ENSMUSG00000021254.10	novel	3829	9	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	25.0918313400995	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTGTCTTGATATAT	NA	False	NA	NA	False	AATGAA	-20	NA	86288639	86338141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86335573
ES.8128.3	chr12	+	6756	10	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	-10	2773	intron_retention	FALSE	canonical	0	0	junction_3	25.6837365075188	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTCAAGCAAACTTTA	NA	False	NA	NA	False	ATTAAA	-8	NA	86216104	86341331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.30	chr12	+	3928	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	11	416	-6	-2	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGTCTTGATATATC	NA	False	NA	NA	False	AATGAA	-21	NA	86288642	86338142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.31	chr12	+	1806	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	19	2530	2	-2116	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTGTGTAGAGCTTTT	NA	False	NA	NA	False	NA	NA	NA	86288650	86336028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.32	chr12	+	7029	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	2	-3202	2	2788	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGGGAGAGTCCATCCC	NA	False	NA	NA	False	ATTAAA	-23	NA	86288650	86341346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8128.33	chr12	+	1870	3	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	16	33359	16	722	5prime_fragment	FALSE	canonical	3	56	junction_1	4.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCATGAATCCACTTAA	NA	False	NA	NA	False	NA	NA	NA	86288664	86304785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86288719_86290808_86291481_86303641
ES.8128.34	chr12	+	3825	9	NNC	ENSMUSG00000021254.10	novel	3829	9	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	26.6117924988153	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTGTCTTGATATAT	NA	False	NA	NA	False	AATGAA	-20	NA	86288664	86338141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86314013_86314069_86315749_86315836_86335573
ES.8128.35	chr12	+	4239	9	NNC	ENSMUSG00000021254.10	novel	3829	9	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	26.6117924988153	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGCTTATGATTGAGGT	NA	False	NA	2	True	AATAAA	-13	NA	86288666	86338557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86314013_86314069_86315749_86315836_86335573
ES.8128.36	chr12	+	3288	3	NIC	ENSMUSG00000021254.10	novel	3829	9	NA	NA	20	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	27.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCTGTGTCTTGATAT	NA	False	NA	NA	False	AATGAA	-18	NA	86288668	86338139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86288719_86290808_86291481_86335573
ES.8128.37	chr12	+	9696	8	NIC	ENSMUSG00000021254.10	novel	4355	10	NA	NA	21	-1	intron_retention	FALSE	canonical	3	40	junction_7	9.96319758523583	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGCTTATGATTGAGGT	NA	False	NA	2	True	AATAAA	-13	NA	86288669	86338557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.38	chr12	+	2622	2	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	39	44745	39	-10664	5prime_fragment	FALSE	canonical	3	56	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	86288687	86293399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86288719_86290808
ES.8128.39	chr12	+	3625	11	NNC	ENSMUSG00000021254.10	novel	4355	10	NA	NA	46	-331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	24.9286983214126	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAATATTAAGCACATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	86288694	86337813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86288719_86290808_86291481_86303641_86303707_86305453_86305532_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.4	chr12	+	735	4	NNC	ENSMUSG00000097543.2	novel	3160	5	NA	NA	-8	40534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.68331255192114	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTTCTTTGACTTCC	NA	False	NA	NA	False	AATGAA	-14	NA	86216106	86282410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86216220_86216782_86217055_86218765_86218861_86282155
ES.8128.40	chr12	+	5996	17	NNC	ENSMUSG00000021254.10	novel	4355	10	NA	NA	2700	19475	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	30.2148556177255	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGCTCCGGGATCCTAC	NA	False	NA	NA	False	AATAAA	-20	NA	86291348	86358033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573_86338818_86339603_86339680_86344261_86344406_86351968_86352655_86355984_86356139_86356248_86356644_86356744_86356838_86356921_86357039_86357689
ES.8128.41	chr12	+	9255	1	Intergenic	novelGene_6722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86291862	86301117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86291900_86301100
ES.8128.42	chr12	+	3325	1	FSM	ENSMUSG00000021254.10	ENSMUST00000220810.2	358	1	-2245	-722	-2245	722	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCATGAATCCACTTAA	NA	False	NA	NA	False	NA	NA	NA	86301460	86304785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86301500_86304800
ES.8128.43	chr12	+	7120	3	ISM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	25949	-2785	6131	2785	3prime_fragment	FALSE	canonical	3	40	junction_2	5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAGGGAGAGTCCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	86314580	86341343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86315836_86328222_86328318_86335573
ES.8128.5	chr12	+	4327	12	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	-4	-3	multi-exon	FALSE	canonical	1	2	junction_3	23.8070758285039	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTGTCTTGATATAT	NA	False	NA	NA	False	AATGAA	-20	NA	86216110	86338141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.6	chr12	+	3577	1	Genic_Genomic	ENSMUSG00000097543.2	novel	NA	NA	NA	NA	-2	-22187	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	86216112	86219689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_86216100_86219700
ES.8128.7	chr12	+	3033	2	ISM	ENSMUSG00000097543.2	ENSMUST00000181667.2	3160	5	-2	22168	-2	-22168	intron_retention	FALSE	canonical	3	16	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCACAGATCACAGAGC	NA	False	NA	NA	False	NA	NA	NA	86216112	86219708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86216220_86216782
ES.8128.8	chr12	+	7629	12	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	-2	2887	intron_retention	FALSE	canonical	1	2	junction_3	23.8070758285039	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTATTTCCTGCTACT	NA	False	NA	NA	False	TATAAA	-20	NA	86216112	86341445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ES.8128.9	chr12	+	4647	11	Fusion	ENSMUSG00000021254.10_ENSMUSG00000097543.2	novel	3160	5	NA	NA	-2	0	multi-exon	FALSE	canonical	1	2	junction_3	24.8807154237976	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTTATGATTGAGGTC	NA	False	NA	3	True	AATAAA	-14	NA	86216112	86338558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_86216220_86216782_86217055_86218765_86218861_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ES.8129.1	chr12	+	3472	1	Intergenic	novelGene_6723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCTGTTCCTTGC	862	False	NA	NA	False	TTTAAA	-44	NA	86471050	86474522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86471000_86474500
ES.813.1	chr1	+	4009	25	NNC	ENSMUSG00000026213.16	novel	4153	24	NA	NA	-3280	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.3831750717085	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	NA	False	NA	18	True	AATAAA	-17	NA	75494892	75513579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75494958_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.11	chr1	+	4421	23	NIC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	11	0	intron_retention	FALSE	canonical	3	17	junction_1	11.5253941686956	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTGACTCTGGAAGT	2751	False	NA	15	True	AATAAA	-14	NA	75498183	75513576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498287_75498407_75498494_75501326_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.12	chr1	+	4465	24	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	11	-1	intron_retention	FALSE	canonical	3	7	junction_5	14.0209133562031	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	2751	False	NA	17	True	AATAAA	-16	NA	75498183	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502400_75502495_75502604_75502730_75502803_75503701_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.13	chr1	+	4045	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	12	401	-11	-1	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	2752	False	NA	17	True	AATAAA	-16	NA	75498184	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.14	chr1	+	4285	23	NIC	ENSMUSG00000026213.16	novel	4153	24	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	37	junction_10	9.36021561523218	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	2755	False	NA	17	True	AATAAA	-16	NA	75498187	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.15	chr1	+	3955	24	NIC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	14.9869508457249	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2758	False	NA	18	True	AATAAA	-17	NA	75498190	75513579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.16	chr1	+	4189	24	NNC	ENSMUSG00000026213.16	novel	4153	24	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_7	13.6427549895578	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACTCTGGAAGTCACC	2758	False	NA	19	True	AATAAA	-18	NA	75498190	75513580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75503979_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.17	chr1	+	4337	25	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	12	-1	intron_retention	FALSE	canonical	3	5	junction_4	16.0476179436908	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	2775	False	NA	17	True	AATAAA	-16	NA	75498207	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501807_75502062_75502159_75502283_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.18	chr1	+	3822	25	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	12	-436	intron_retention	FALSE	canonical	3	5	junction_5	16.0413961016144	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTAGTATGTAGAAATG	2775	False	NA	NA	False	AATAAA	-17	NA	75498207	75513140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502283_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.19	chr1	+	4143	24	NIC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	19	0	intron_retention	FALSE	canonical	3	17	junction_1	11.3018391865267	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTGACTCTGGAAGT	2782	False	NA	15	True	AATAAA	-14	NA	75498214	75513576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.2	chr1	+	4191	26	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	16.444135732838	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	2738	False	NA	17	True	AATAAA	-16	NA	75498170	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502283_75502416_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.20	chr1	+	5996	18	NNC	ENSMUSG00000026213.16	novel	4095	23	NA	NA	19	0	intron_retention	FALSE	canonical	0	0	junction_2	17.8321664182889	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2782	False	NA	18	True	AATAAA	-17	NA	75498214	75513579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498494_75501326_75501588_75501731_75501807_75502062_75502400_75502495_75502604_75502730_75502803_75503701_75504111_75504219_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.21	chr1	+	4006	25	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	13.8668644817621	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	2786	False	NA	18	True	AATAAA	-17	NA	75498218	75513579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511053_75511119_75511821_75512070_75512729
ES.813.23	chr1	+	3705	24	NNC	ENSMUSG00000026213.16	novel	4153	24	NA	NA	37	-438	intron_retention	FALSE	canonical	0	0	junction_7	13.6427549895578	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGGTAGTATGTAGAAA	2800	False	NA	NA	False	AATAAA	-15	NA	75498232	75513138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75503979_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.24	chr1	+	4795	22	NIC	ENSMUSG00000026213.16	novel	4153	24	NA	NA	84	-6	intron_retention	FALSE	canonical	3	37	junction_8	9.46984712311384	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTAGTCCACTTTCT	2847	False	NA	NA	False	ATTAAA	-9	NA	75498279	75513973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498494_75501326_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.25	chr1	+	3280	12	FSM	ENSMUSG00000026213.16	ENSMUST00000156838.8	2968	12	-750	438	-415	-435	multi-exon	FALSE	canonical	3	40	junction_1	11.0378761880989	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAGTATGTAGAAATGT	9101	False	NA	NA	False	AATAAA	-18	NA	75504533	75513141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.26	chr1	+	2480	13	NNC	ENSMUSG00000026213.16	novel	4095	23	NA	NA	-274	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.8457900419741	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTGACTCTGGAAGTCA	9242	False	NA	17	True	AATAAA	-16	NA	75504674	75513578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75504763_75504952_75505038_75506092_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.27	chr1	+	2715	12	NNC	ENSMUSG00000026213.16	novel	2968	12	NA	NA	-437	-436	intron_retention	FALSE	non_canonical	0	0	junction_6	18.2258557599312	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTAGTATGTAGAAATG	137	False	NA	NA	False	AATAAA	-17	NA	75505880	75513140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509648_75509693_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.28	chr1	+	3555	8	NNC	ENSMUSG00000026213.16	novel	2968	12	NA	NA	260	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	22.2095769010229	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTCCACTTTCTCAGTG	834	False	NA	NA	False	ATTAAA	-14	NA	75506577	75513978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75506995_75508946_75509648_75509693_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.3	chr1	+	3737	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	-19	435	4	-435	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAGTATGTAGAAATGT	2744	False	NA	NA	False	AATAAA	-18	NA	75498176	75513141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.4	chr1	+	4194	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	-19	-22	4	19	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGAGCGAAGCACTGT	2744	False	NA	37	True	AATAAA	-36	NA	75498176	75513598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.5	chr1	+	3759	25	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	10	-437	intron_retention	FALSE	canonical	0	0	junction_13	18.3858622467252	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGGTAGTATGTAGAAAT	2750	False	NA	NA	False	AATAAA	-16	NA	75498182	75513139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501807_75502062_75502159_75502283_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505718_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.6	chr1	+	3606	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	10	842	10	-439	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGGTAGTATGTAGAA	2750	False	NA	NA	False	AATAAA	-14	NA	75498182	75513137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.7	chr1	+	3725	26	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	10	-436	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	15.72768260107	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTAGTATGTAGAAATG	2750	False	NA	NA	False	AATAAA	-17	NA	75498182	75513140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502283_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.8	chr1	+	3581	25	NNC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	10	-439	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.1564826229757	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGGTAGTATGTAGAA	2750	False	NA	NA	False	AATAAA	-14	NA	75498182	75513137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75498287_75498407_75498494_75501326_75501588_75501731_75501807_75502200_75502400_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75505554_75505906_75506054_75506127_75506224_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.813.9	chr1	+	4099	25	NIC	ENSMUSG00000026213.16	novel	4458	25	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	14.6642398560428	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTGACTCTGGAAGT	2751	False	NA	15	True	AATAAA	-14	NA	75498183	75513576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75498287_75498407_75498494_75501326_75501588_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ES.8130.1	chr12	+	4032	7	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	-14941	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.866946854504	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCGTTGTCTGTTGGAG	8172	False	NA	24	True	AATAAA	-24	NA	86501949	86568407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86502099_86516919_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.10	chr12	+	3598	2	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	20	-36029	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATGCTAAGTGCCTAG	NA	False	NA	NA	False	NA	NA	NA	86516910	86520712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86519425_86519628
ES.8130.11	chr12	+	3696	2	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	21	-36028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	694	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGCTAAGTGCCTAGG	NA	False	NA	NA	False	NA	NA	NA	86516911	86520713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86517435
ES.8130.12	chr12	+	3962	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	21	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	303.402601981079	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516911	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86517835_86517920_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.13	chr12	+	2617	1	NIC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	22	-37212	mono-exon	FALSE	NA	NA	NA	NA	NA	688	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACTACACTAACAGGCC	NA	False	NA	NA	False	NA	NA	NA	86516912	86519529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86516900_86519500
ES.8130.14	chr12	+	3850	6	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	264.7682760453	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516912	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553149_86553285_86561054_86561325_86565594
ES.8130.15	chr12	+	3942	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	310.552733042232	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516912	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86562109_86562175_86565594
ES.8130.16	chr12	+	2617	2	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	22	-30363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCCTTAGAGCATATAAATA	NA	False	NA	NA	False	AAAACA	-4	NA	86516912	86526378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86519372_86526220
ES.8130.17	chr12	+	3722	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	26	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	245.866946854504	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516916	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594_86567932_86568082
ES.8130.18	chr12	+	4054	6	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	266.702080981758	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516916	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535320_86535474_86552445_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.19	chr12	+	3754	5	NIC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	28	-5	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	286.452766612578	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516918	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86517330_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.2	chr12	+	3918	7	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	-300	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.866946854504	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516590	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86516637_86516919_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.21	chr12	+	3358	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	30	-2044	30	-516	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGGAGGTGCTGGCTGG	NA	False	NA	NA	False	TATAAA	-22	NA	86516920	86567883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.23	chr12	+	3686	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	983	-1	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	240.979999170056	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGTTCATGCGTTGTCTG	NA	False	NA	18	True	AATAAA	-18	NA	86517873	86568401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86518093_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.24	chr12	+	3627	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	1122	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	309.868117107908	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86518012	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86518093_86518802_86518888_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.25	chr12	+	3616	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	3043	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	263.617450105261	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	618	False	NA	13	True	AATAAA	-13	NA	86519933	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86520088_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.26	chr12	+	3931	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	6551	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.617450105261	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	2877	False	NA	13	True	AATAAA	-13	NA	86523441	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86523911_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.27	chr12	+	1948	1	Intergenic	novelGene_6727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	655	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATCCAGGGCTGTGGCTA	3226	False	NA	NA	False	NA	NA	NA	86523790	86525738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86523800_86525700
ES.8130.28	chr12	+	3870	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	7779	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	257.657447010561	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	4105	False	NA	13	True	AATAAA	-13	NA	86524669	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86525078_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.29	chr12	+	4197	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	12072	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.617450105261	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	8398	False	NA	13	True	AATAAA	-13	NA	86528962	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86529698_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.3	chr12	+	3959	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	-44	-2571	-44	8	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTTGTCTGTTGGAGTAC	NA	False	NA	27	True	AATAAA	-27	NA	86516846	86568410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.30	chr12	+	4634	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	12147	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.617450105261	970	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	8473	False	NA	13	True	AATAAA	-13	NA	86529037	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86530210_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.31	chr12	+	4463	5	ISM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	17427	-2555	-16865	-5	3prime_fragment	FALSE	canonical	3	623	junction_1	33.5885024971343	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86534317	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.32	chr12	+	3375	5	NIC	ENSMUSG00000021255.18	novel	694	4	NA	NA	85	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	289.469342072697	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86551267	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86551298_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.33	chr12	+	3384	5	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	380	-3	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	286.021852312022	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86551562	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86551602_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.34	chr12	+	3599	5	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	569	-3	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	277.835720345675	969	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86551751	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86552006_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.35	chr12	+	4128	4	ISM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	34915	-2557	623	-3	3prime_fragment	FALSE	canonical	3	638	junction_1	32.4995726467629	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86551805	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.36	chr12	+	3292	5	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	1404	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	289.469342072697	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86552586	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86552700_86553122_86553285_86561054_86561325_86565594_86567223_86567277
ES.8130.38	chr12	+	2818	1	Genic_Genomic	ENSMUSG00000021255.18	novel	NA	NA	NA	NA	10478	-1361	mono-exon	FALSE	NA	NA	NA	NA	NA	701	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATTGATCTTGCAAT	NA	False	NA	NA	False	NA	NA	NA	86561660	86564478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_86561700_86564500
ES.8130.4	chr12	+	4012	6	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.617450105261	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGAGTCGTTCATGCG	NA	False	NA	11	True	AATAAA	-11	NA	86516880	86568394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535217_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.5	chr12	+	3832	1	NIC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	-9	-36028	mono-exon	FALSE	NA	NA	NA	NA	NA	694	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGCTAAGTGCCTAGG	NA	False	NA	NA	False	NA	NA	NA	86516881	86520713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86516900_86520700
ES.8130.6	chr12	+	3699	6	NNC	ENSMUSG00000021255.18	novel	1344	6	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	263.617450105261	1019	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGTTCATGCGTTGTCT	NA	False	NA	17	True	AATAAA	-17	NA	86516889	86568400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517123_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ES.8130.7	chr12	+	8170	5	ISM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	1	-2557	1	-3	intron_retention	FALSE	canonical	3	623	junction_2	33.2969593206347	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516891	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054
ES.8130.9	chr12	+	2042	7	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	245.866946854504	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGTCGTTCATGCGTT	NA	False	NA	13	True	AATAAA	-13	NA	86516891	86568396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594_86565880_86567737
ES.8131.1	chr12	-	1732	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	10.7806410858642	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACCTTGGCTCCATCGT	NA	False	NA	NA	False	TATAAA	-21	NA	86516793	86470735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86471828_86476368_86476447_86508048_86508306_86516488
ES.8131.10	chr12	-	6609	1	Intergenic	novelGene_6724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-34	NA	86496980	86490371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86490400_86497000
ES.8131.11	chr12	-	179	1	Intergenic	novelGene_6725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGAGT	NA	False	NA	NA	False	NA	NA	NA	86499239	86499060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86499100_86499200
ES.8131.12	chr12	-	4777	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	12.7279220613579	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTCCCCATCTGCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	86516792	86501920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86506056_86506775_86506857_86508048_86508306_86516488
ES.8131.13	chr12	-	3246	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	10.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATAGACAAGTATTAT	NA	False	NA	NA	False	NA	NA	NA	86516791	86504173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86506860_86508048_86508306_86516488
ES.8131.14	chr12	-	2659	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	10.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGCCCGGCTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	86516813	86504782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86506860_86508048_86508306_86516488
ES.8131.15	chr12	-	2351	1	Intergenic	novelGene_6726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTCCCTAGCTACAGC	NA	False	NA	NA	False	AAAAAG	-29	NA	86513681	86511330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86511300_86513700
ES.8131.2	chr12	-	852	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_2	7.78888096369861	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCTCCAGGTCACT	NA	False	NA	-21	True	ATTAAA	-16	NA	86516832	86471841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86472015_86476368_86476447_86508048_86508306_86516488
ES.8131.3	chr12	-	753	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	7.5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTTTCTCCAGGTC	NA	False	NA	-24	True	ATTAAA	-13	NA	86516814	86471844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86472015_86508048_86508306_86516488
ES.8131.4	chr12	-	771	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86516827	86478792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86478968_86508048_86508306_86516488
ES.8131.5	chr12	-	2795	5	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	10.9201648339208	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTAAAGCATTATTATT	NA	False	NA	NA	False	NA	NA	NA	86516793	86487253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86489337_86489704_86489771_86506775_86506860_86508048_86508306_86516488
ES.8131.6	chr12	-	2650	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	8.5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTAAAGCATTATTATT	NA	False	NA	NA	False	NA	NA	NA	86516798	86487253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86489337_86508048_86508306_86516488
ES.8131.7	chr12	-	2763	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	11.5758369027902	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTAAAGCATTATTATT	NA	False	NA	NA	False	NA	NA	NA	86516827	86487253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86489337_86506775_86506860_86508048_86508306_86516488
ES.8131.8	chr12	-	2920	3	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	86517477	86487268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86489337_86508048_86508306_86516882
ES.8131.9	chr12	-	2717	4	Antisense	novelGene_ENSMUSG00000021255.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	11.6141675934562	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	86516814	86487268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_86489337_86489704_86489771_86508048_86508306_86516488
ES.8132.1	chr12	-	4215	1	Intergenic	novelGene_6728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGCTATTACACTTATC	NA	False	NA	NA	False	AAAACA	-42	NA	86544737	86540522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86540500_86544700
ES.8133.1	chr12	-	159	1	Intergenic	novelGene_6729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	86643633	86643474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86643500_86643600
ES.8134.1	chr12	+	2738	1	NIC	ENSMUSG00000021256.6	novel	2599	7	NA	NA	13	-10641	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTTTGGAGAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	86725486	86728224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86725500_86728200
ES.8135.1	chr12	+	1853	1	Intergenic	novelGene_6730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTCTGATTTTCTT	6207	False	NA	13	True	AATAAA	-42	NA	86740606	86742459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86740600_86742500
ES.8136.1	chr12	+	2439	5	Intergenic	novelGene_6731	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGCCCAAAACAAAGACAG	NA	False	NA	NA	False	ATTAAA	-40	NA	86749011	86766377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86749216_86749930_86750109_86752053_86752113_86763691_86763801_86764488
ES.8137.1	chr12	+	2652	1	Antisense	novelGene_ENSMUSG00000021257.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCACACCGGTCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	86770552	86773204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_86770600_86773200
ES.8138.1	chr12	-	3193	8	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_6	37.034457204179	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773238	86747275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86768084_86768155_86769618_86770195_86773103
ES.8138.10	chr12	-	3541	11	NNC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	27.3439207137528	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTTAGCCTTGTTAT	NA	False	NA	-2	True	AATAAA	-17	NA	86773254	86747277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86769809_86770135_86770195_86773103
ES.8138.11	chr12	-	6910	8	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	40	-3	intron_retention	FALSE	canonical	3	76	junction_2	7.73542078324622	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGTTGTTAGCCTTGTTA	NA	False	NA	-3	True	AATAAA	-16	NA	86773194	86747278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_86750095_86752040_86752111_86763689_86763801_86764488_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.13	chr12	-	1836	5	ISM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	46	19284	46	-1440	5prime_fragment	FALSE	canonical	3	87	junction_1	6.17960354715414	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGGCAGAGAGGTGC	NA	False	NA	NA	False	NA	NA	NA	86773188	86766559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.2	chr12	-	3883	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	-33	0	-33	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773267	86747275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.3	chr12	-	3852	10	NNC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	28.4531236758564	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773202	86747275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768580_86768842_86769618_86770195_86773103
ES.8138.5	chr12	-	6225	9	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	12	-1	intron_retention	FALSE	canonical	3	66	junction_1	10.4642247682282	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	False	NA	-1	True	AATAAA	-18	NA	86773222	86747276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.6	chr12	-	3423	9	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	-8	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	28.4052701976235	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	False	NA	-1	True	AATAAA	-18	NA	86773242	86747276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.8	chr12	-	3546	10	NNC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	52	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.4765443873886	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	False	NA	-1	True	AATAAA	-18	NA	86773182	86747276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767254_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8138.9	chr12	-	4324	10	NIC	ENSMUSG00000021257.15	novel	3850	10	NA	NA	44	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	28.7715565991102	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	False	NA	-1	True	AATAAA	-18	NA	86773190	86747276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86765135_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ES.8139.1	chr12	-	1224	1	Intergenic	novelGene_6732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTGGGAACTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	86807964	86806740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86806700_86808000
ES.814.1	chr1	-	3036	2	Antisense	novelGene_ENSMUSG00000026213.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAAACAA	4307	False	NA	NA	False	NA	NA	NA	75502337	75499045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75501805_75502060
ES.814.2	chr1	-	3288	1	Antisense	novelGene_ENSMUSG00000026213.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	4306	False	NA	NA	False	NA	NA	NA	75502338	75499050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75499000_75502300
ES.814.3	chr1	-	1198	2	Antisense	novelGene_ENSMUSG00000026213.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGCCTAGGCTACTT	4307	False	NA	NA	False	NA	NA	NA	75502337	75500883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_75501805_75502060
ES.8140.1	chr12	+	1419	5	NNC	ENSMUSG00000059114.9	novel	1854	14	NA	NA	20257	1192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.27760839478607	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	86808037	86811763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86808340_86808429_86808538_86809335_86809419_86809587_86809682_86810931
ES.8141.1	chr12	+	189	1	Intergenic	novelGene_6733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGTAAATAAATA	455	False	NA	NA	False	NA	NA	NA	86834610	86834799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86834600_86834800
ES.8142.1	chr12	+	141	1	Intergenic	novelGene_6734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCCTAAAC	NA	False	NA	NA	False	NA	NA	NA	86866561	86866702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86866600_86866700
ES.8143.1	chr12	+	1384	6	Intergenic	novelGene_6735	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATTTGCATGCATATAC	487	False	NA	NA	False	AAAAAG	-20	NA	86868206	86874224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86868456_86868832_86869007_86872212_86872269_86872732_86872818_86872941_86873084_86873546
ES.8144.1	chr12	-	178	1	Intergenic	novelGene_6736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATATATTTATTT	9952	False	NA	NA	False	NA	NA	NA	86875921	86875743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86875700_86875900
ES.8145.1	chr12	-	254	1	Intergenic	novelGene_6737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGGGGGGTGGGGG	8862	False	NA	NA	False	NA	NA	NA	86888160	86887906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86887900_86888200
ES.8146.1	chr12	+	238	1	Intergenic	novelGene_6738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATGCTTCCTTCCTTA	517	False	NA	NA	False	NA	NA	NA	86892132	86892370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86892100_86892400
ES.8147.1	chr12	-	181	1	Intergenic	novelGene_6739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGGAAAC	3851	False	NA	NA	False	NA	NA	NA	86893171	86892990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86893000_86893200
ES.8148.1	chr12	+	1746	1	Intergenic	novelGene_6740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	2659	False	NA	NA	False	NA	NA	NA	86894274	86896020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86894300_86896000
ES.8149.1	chr12	+	195	1	Intergenic	novelGene_6741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAATAAATAAAAATAAA	6466	False	NA	35	True	NA	NA	NA	86909171	86909366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86909200_86909400
ES.815.1	chr1	+	4018	23	NNC	ENSMUSG00000006576.17	novel	6227	21	NA	NA	-190	191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.13036528110673	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCCTCATTTTCTT	906	False	NA	NA	False	NA	NA	NA	75522719	75535725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_75522807_75523458_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270_75534445_75535456
ES.815.2	chr1	+	4106	23	FSM	ENSMUSG00000006576.17	ENSMUST00000124341.8	7182	23	-15	3091	-15	191	multi-exon	FALSE	canonical	0	0	junction_3	4.09797369803078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGCCTCATTTTCTT	1081	False	NA	NA	False	NA	NA	NA	75522894	75535725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_75523027_75523415_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270_75534445_75535456
ES.815.3	chr1	+	4628	22	NIC	ENSMUSG00000006576.17	novel	7182	23	NA	NA	-6	193	intron_retention	FALSE	canonical	0	0	junction_6	4.13546137889432	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCATTTTCTTGG	1120	False	NA	NA	False	NA	NA	NA	75522933	75535727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75523027_75523415_75523566_75523876_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528782_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270_75534445_75535456
ES.815.4	chr1	+	3787	16	NIC	ENSMUSG00000006576.17	novel	6227	21	NA	NA	-608	193	intron_retention	FALSE	canonical	0	0	junction_2	4.44921965692362	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCATTTTCTTGG	641	False	NA	NA	False	NA	NA	NA	75525634	75535727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_75525710_75527147_75527297_75527398_75528027_75528280_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270_75534445_75535456
ES.8150.1	chr12	+	3310	2	Antisense	novelGene_ENSMUSG00000034168.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGTGTTGTGATT	NA	False	NA	6	True	AATAAA	-21	NA	86929025	86932519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_86929174_86929357
ES.8150.10	chr12	+	2548	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	0	1550	0	5	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTTCCCTGTTCTCAC	NA	False	NA	13	True	AATAAA	-25	NA	86994116	87010586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ES.8150.11	chr12	+	4199	5	FSM	ENSMUSG00000034157.13	ENSMUST00000190588.2	573	5	-145	-3481	2	2	multi-exon	FALSE	canonical	1	1	junction_2	47.8767950055139	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994118	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994274_86999517_86999706_87006501_87006603_87007045_87007216_87008553
ES.8150.12	chr12	+	4170	4	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	3	2	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	46.6976087896015	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994119	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86994274_86999517_86999779_87007045_87007216_87008553
ES.8150.13	chr12	+	1440	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	32	2626	-21	69	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGAGCTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	86994148	87009510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ES.8150.14	chr12	+	4083	4	NNC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.0532590377257	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATTTGGTCTATTTG	NA	False	NA	2	True	AATAAA	-14	NA	86994149	87012131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994274_86999517_86999706_87007045_87007216_87008530
ES.8150.16	chr12	+	3828	3	ISM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	53	1555	0	0	intron_retention	FALSE	canonical	3	103	junction_1	2	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCCTTCCCTGTT	NA	False	NA	8	True	AATAAA	-20	NA	86994169	87010581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86994274_86999517_86999706_87007045
ES.8150.17	chr12	+	4177	5	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.1248441394086	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994172	87012136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86994274_86994742_86994878_86999517_86999706_87007045_87007216_87008553
ES.8150.18	chr12	+	2569	5	NIC	ENSMUSG00000034157.13	novel	573	5	NA	NA	-8	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.1248441394086	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCAGAAAGGATCCTTC	NA	False	NA	2	True	AATAAA	-14	NA	86994219	87010575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86994274_86994742_86994878_86999517_86999706_87007045_87007216_87008553
ES.8150.19	chr12	+	4034	5	NNC	ENSMUSG00000034157.13	novel	573	5	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	47.8767950055139	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTGGTCTATTTGCTT	NA	False	NA	5	True	AATAAA	-17	NA	86994220	87012134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994274_86999517_86999706_87006560_87006603_87007045_87007216_87008553
ES.8150.2	chr12	+	3218	1	Antisense	novelGene_ENSMUSG00000034168.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGTGTTGTGATTTC	NA	False	NA	8	True	AATAAA	-23	NA	86929303	86932521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_86929300_86932500
ES.8150.21	chr12	+	4071	5	NNC	ENSMUSG00000034157.13	novel	573	5	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.2292770227427	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994244	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994274_86994773_86994878_86999517_86999706_87007045_87007216_87008558
ES.8150.22	chr12	+	2581	5	NIC	ENSMUSG00000034157.13	novel	573	5	NA	NA	6	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	47.8767950055139	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATCAGAAAGGATCCTT	NA	False	NA	1	True	AATAAA	-13	NA	86994245	87010574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_86994274_86999517_86999779_87006501_87006603_87007045_87007216_87008553
ES.8150.24	chr12	+	2441	4	NNC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	7	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	49.0532590377257	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTTCCCTGTTCTCAC	NA	False	NA	13	True	AATAAA	-25	NA	86994246	87010586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994274_86999517_86999706_87007045_87007216_87008530
ES.8150.25	chr12	+	4174	5	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	49.0866580650995	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994273	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994370_86994742_86994878_86999517_86999706_87007045_87007216_87008553
ES.8150.26	chr12	+	4851	6	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.6833297429267	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994275	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994892_86996237_86996429_86999517_86999706_87006501_87006603_87007045_87007216_87008553
ES.8150.27	chr12	+	3974	4	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6643835080875	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86994296	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994328_86999517_86999706_87007045_87007216_87008553
ES.8150.28	chr12	+	4048	4	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	61	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6643835080875	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTTGGTCTATTTGC	NA	False	NA	3	True	AATAAA	-15	NA	86994324	87012132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86994436_86999517_86999706_87007045_87007216_87008553
ES.8150.29	chr12	+	3943	3	FSM	ENSMUSG00000034157.13	ENSMUST00000191463.2	1499	3	85	-2529	85	0	multi-exon	FALSE	canonical	3	99	junction_2	4	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86999515	87012136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86999706_87007045_87007216_87008553
ES.8150.3	chr12	+	4169	4	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	-63352	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6643835080875	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86930464	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86930691_86999517_86999706_87007045_87007216_87008553
ES.8150.30	chr12	+	2482	4	ISM	ENSMUSG00000034157.13	ENSMUST00000185434.7	2695	5	5699	7	85	-7	3prime_fragment	FALSE	canonical	1	1	junction_1	44.2292010127045	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATCAGAAAGGATCCTT	NA	False	NA	1	True	AATAAA	-13	NA	86999515	87010574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_86999706_87006501_87006603_87007045_87007216_87008553
ES.8150.31	chr12	+	2388	3	FSM	ENSMUSG00000034157.13	ENSMUST00000191463.2	1499	3	85	-974	85	0	multi-exon	FALSE	canonical	3	99	junction_2	4	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGGATCCTTCCCTGTT	NA	False	NA	8	True	AATAAA	-20	NA	86999515	87010581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86999706_87007045_87007216_87008553
ES.8150.32	chr12	+	7512	2	ISM	ENSMUSG00000034157.13	ENSMUST00000191463.2	1499	3	3852	-2525	3852	-4	3prime_fragment	FALSE	canonical	3	99	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTTGGTCTATTTGC	NA	False	NA	3	True	AATAAA	-15	NA	87003282	87012132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87007216_87008553
ES.8150.33	chr12	+	5420	3	ISM	ENSMUSG00000034157.13	ENSMUST00000185434.7	2695	5	11114	-1550	5500	-5	3prime_fragment	FALSE	canonical	2	10	junction_1	44.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATTTGGTCTATTTG	NA	False	NA	2	True	AATAAA	-14	NA	87004930	87012131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87006603_87007045_87007216_87008553
ES.8150.34	chr12	+	3914	1	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	8792	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	87008222	87012136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87008200_87012100
ES.8150.4	chr12	+	175	1	Intergenic	novelGene_6742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAGAAAAAAAGA	2064	False	NA	NA	False	NA	NA	NA	86954804	86954979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86954800_86955000
ES.8150.5	chr12	+	178	1	Intergenic	novelGene_6743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAAAAG	7161	False	NA	NA	False	NA	NA	NA	86959901	86960079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_86959900_86960100
ES.8150.6	chr12	+	4104	4	NNC	ENSMUSG00000034157.13	novel	1499	3	NA	NA	-4005	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6643835080875	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86989811	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_86989973_86999517_86999706_87007045_87007216_87008553
ES.8150.7	chr12	+	4156	4	FSM	ENSMUSG00000034157.13	ENSMUST00000189246.7	1454	4	-5	-2697	-5	2	multi-exon	FALSE	canonical	2	12	junction_1	43.0219582177391	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86993811	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994025_86999517_86999706_87007045_87007216_87008553
ES.8150.8	chr12	+	4257	5	FSM	ENSMUSG00000034157.13	ENSMUST00000185434.7	2695	5	-5	-1557	-5	2	multi-exon	FALSE	canonical	1	1	junction_2	39.7649343014672	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86993811	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994025_86999517_86999706_87006501_87006603_87007045_87007216_87008553
ES.8150.9	chr12	+	4396	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	-296	-2	4	2	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	False	NA	9	True	AATAAA	-21	NA	86993820	87012138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ES.8151.1	chr12	-	4433	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-50	-285	-50	285	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAGGAATGCTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	86931622	86927189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_86927200_86931600
ES.8151.2	chr12	-	4230	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-126	-6	-126	6	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGTCAGCAAATTTGTC	NA	False	NA	-8	True	AATAAA	-22	NA	86931698	86927468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_86927500_86931700
ES.8151.3	chr12	-	4050	2	Genic_Genomic	ENSMUSG00000034168.8	novel	4098	1	NA	NA	-14	1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCCTGAGTCAGCAAAT	NA	False	NA	-13	True	AATAAA	-17	NA	86931586	86927473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_86930862_86930924
ES.8151.4	chr12	-	3446	2	Genic_Genomic	ENSMUSG00000034168.8	novel	4098	1	NA	NA	231	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCCTGAGTCAGCAAA	NA	False	NA	-14	True	AATAAA	-16	NA	86931341	86927474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_86930716_86931136
ES.8151.5	chr12	-	3839	2	Genic_Genomic	ENSMUSG00000034168.8	novel	4098	1	NA	NA	126	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGCCCTGAGTCAGC	NA	False	NA	-17	True	AATAAA	-13	NA	86931446	86927477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_86927834_86927963
ES.8151.6	chr12	-	3838	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	-100	360	-100	-360	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGTGTTGAAGTCTAT	NA	False	NA	NA	False	AAAAAG	-18	NA	86931672	86927834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_86927800_86931700
ES.8151.7	chr12	-	3462	2	Genic_Genomic	ENSMUSG00000034168.8	novel	4098	1	NA	NA	186	-387	multi-exon	FALSE	non_canonical	0	0	junction_1	0	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAAAAGCGTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	86931386	86927861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_86930862_86930924
ES.8152.1	chr12	-	1538	1	Intergenic	novelGene_6744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTTTTAAGTG	1345	False	NA	NA	False	AATAAA	-13	NA	86989315	86987777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_86987800_86989300
ES.8153.1	chr12	-	178	1	Intergenic	novelGene_6745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGTTAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	87004531	87004353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87004400_87004500
ES.8154.1	chr12	+	3463	25	NIC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	36	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_3	2.27264835721577	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGAATCCTTGCTGG	NA	False	NA	NA	False	ATTAAA	-30	NA	87073101	87136815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87073365_87099599_87099663_87102218_87102260_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.10	chr12	+	4518	20	NNC	ENSMUSG00000034145.15	novel	3311	24	NA	NA	19244	1779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2.59660976495663	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCTGGCCTGTGCCTC	NA	False	NA	4	True	AATAAA	-14	NA	87104456	87138596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123867_87123938_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.11	chr12	+	3848	6	NNC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	40960	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.82842712474619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACCATGCTGAATC	NA	False	NA	NA	False	ATTAAA	-22	NA	87126172	87136807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133106_87133201_87135999
ES.8154.2	chr12	+	3432	25	NNC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	2.36254041705581	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGAATCCTTGCTGGTT	NA	False	NA	NA	False	ATTAAA	-32	NA	87073253	87136817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87073365_87099599_87099663_87102218_87102260_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128853_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.3	chr12	+	3404	25	FSM	ENSMUSG00000034145.15	ENSMUST00000110187.8	3327	25	-69	-8	-69	0	multi-exon	FALSE	canonical	1	1	junction_7	2.1586389744981	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGAATCCTTGCTGG	NA	False	NA	NA	False	ATTAAA	-30	NA	87073268	87136815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87073365_87085215_87085365_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.4	chr12	+	3228	24	FSM	ENSMUSG00000034145.15	ENSMUST00000146292.8	3455	24	221	6	-51	-1	multi-exon	FALSE	canonical	1	1	junction_6	2.14678728619626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAACCATGCTGAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	87073286	87136806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87073365_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.5	chr12	+	3644	27	NNC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.32175204196716	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGAATCCTTGCTGG	NA	False	NA	NA	False	ATTAAA	-30	NA	87073286	87136815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87073365_87085215_87085365_87085915_87086064_87087746_87087857_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.6	chr12	+	3322	24	NIC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	2.46410909831387	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATGCTGAATCCTTGC	NA	False	NA	NA	False	ATTAAA	-27	NA	87073340	87136812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87073445_87085215_87085365_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.7	chr12	+	3391	25	NIC	ENSMUSG00000034145.15	novel	3327	25	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.29090896564855	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAACCATGCTGAATC	NA	False	NA	NA	False	ATTAAA	-22	NA	87073353	87136807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87073445_87085215_87085365_87099599_87099663_87103161_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8154.8	chr12	+	175	1	Intergenic	novelGene_6746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAACAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	87100362	87100537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87100400_87100500
ES.8154.9	chr12	+	6861	22	ISM	ENSMUSG00000034145.15	ENSMUST00000131878.2	3311	24	15962	-1778	15962	1776	3prime_fragment	FALSE	canonical	1	1	junction_4	2.18840481772877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCTCTGCTGGCCTGTGC	NA	False	NA	1	True	AATAAA	-11	NA	87101174	87138593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87103372_87103896_87103977_87104404_87104487_87108294_87108333_87112246_87112390_87113669_87113719_87115896_87116006_87118041_87118116_87118680_87118762_87118871_87118996_87119631_87119766_87121851_87121975_87122384_87122539_87123172_87123280_87123965_87124053_87124666_87124733_87128571_87128735_87128972_87129079_87129463_87129632_87131235_87131346_87133128_87133201_87135999
ES.8155.1	chr12	+	1130	1	Intergenic	novelGene_6747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACAAACAAAAAACCCA	3383	False	NA	NA	False	NA	NA	NA	87151366	87152496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87151400_87152500
ES.8156.1	chr12	+	1866	10	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	163.094458732159	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	False	NA	11	True	NA	NA	NA	87193960	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87194228_87194546_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.10	chr12	+	5857	1	Genic_Genomic	ENSMUSG00000021033.12	novel	NA	NA	NA	NA	-10	-3354	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTATCTATGGGCTGTAC	NA	False	NA	NA	False	NA	NA	NA	87194481	87200338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87194500_87200300
ES.8156.11	chr12	+	1665	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-10	1	-10	-1	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTTTGTCATGGACA	NA	False	NA	12	True	NA	NA	NA	87194481	87211496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.12	chr12	+	1426	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-10	240	-10	159	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGCCTTTATAAATGT	NA	False	NA	NA	False	NA	NA	NA	87194481	87211257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.13	chr12	+	2977	8	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	1	junction_3	183.2179476103	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	False	NA	11	True	NA	NA	NA	87194481	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206399_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.15	chr12	+	1352	8	FSM	ENSMUSG00000021033.12	ENSMUST00000220574.2	971	8	-59	-322	-5	158	multi-exon	FALSE	canonical	3	19	junction_2	172.56918163154	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGGCCTTTATAAATG	NA	False	NA	NA	False	NA	NA	NA	87194486	87211256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.16	chr12	+	2528	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-4	-868	-4	868	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTAATTTTCCCTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	87194487	87212365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.17	chr12	+	2719	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-4	159	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGCCTTTATAAATGT	NA	False	NA	NA	False	NA	NA	NA	87194487	87211257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.18	chr12	+	1590	8	FSM	ENSMUSG00000021033.12	ENSMUST00000220574.2	971	8	-58	-561	-4	-2	multi-exon	FALSE	canonical	3	19	junction_2	172.56918163154	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	False	NA	11	True	NA	NA	NA	87194487	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.19	chr12	+	3931	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-3	-2272	-3	2272	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTCATGCATCACGGGAT	NA	False	NA	NA	False	ATTAAA	-21	NA	87194488	87213769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.2	chr12	+	2216	1	NIC	ENSMUSG00000021033.12	novel	1571	10	NA	NA	26	-7512	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCTGCTGAAGGG	NA	False	NA	NA	False	NA	NA	NA	87193964	87196180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194000_87196200
ES.8156.20	chr12	+	1689	9	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	172.987671164739	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	False	NA	11	True	NA	NA	NA	87194488	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208216_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.21	chr12	+	8489	1	FSM	ENSMUSG00000021033.12	ENSMUST00000220468.2	3035	1	-2396	-3058	-2396	3058	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTTGCTGCCTCTCCCC	NA	False	NA	NA	False	NA	NA	NA	87198261	87206750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87198300_87206800
ES.8156.22	chr12	+	4738	8	ISM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	6964	2	798	-2	3prime_fragment	FALSE	canonical	3	449	junction_4	27.7216485065078	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	921	False	NA	11	True	NA	NA	NA	87201455	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.23	chr12	+	3459	3	ISM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	7173	4747	1007	3058	internal_fragment	FALSE	canonical	3	504	junction_2	19	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTTGCTGCCTCTCCCC	1130	False	NA	NA	False	NA	NA	NA	87201664	87206750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87204719_87205851_87205920_87206413
ES.8156.24	chr12	+	1334	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	6	-616	6	157	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGGGCCTTTATAAAT	3853	False	NA	NA	False	NA	NA	NA	87204387	87211255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.25	chr12	+	1569	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	11	-856	11	-2	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	3858	False	NA	11	True	NA	NA	NA	87204392	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.26	chr12	+	1159	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	21	-456	21	-3	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAGTTCGATATATCT	3868	False	NA	13	True	ATTAAA	-18	NA	87204402	87211095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.27	chr12	+	3667	2	NIC	ENSMUSG00000021033.12	novel	971	8	NA	NA	2781	-2	intron_retention	FALSE	canonical	3	480	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	6628	False	NA	11	True	NA	NA	NA	87207162	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87209812_87210477
ES.8156.28	chr12	+	3027	9	NNC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	3311	19777	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	208.074768713076	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCACCTCTATACAATTT	7158	False	NA	NA	False	AATAAA	-21	NA	87207692	87231274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87208328_87208813_87208867_87209761_87209812_87215347_87215492_87224890_87224959_87226713_87226883_87227124_87227253_87227732_87227800_87229561
ES.8156.3	chr12	+	1435	9	NIC	ENSMUSG00000021033.12	novel	1571	10	NA	NA	35	-4	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	144.461067419565	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCAGTTCGATATATC	NA	False	NA	12	True	ATTAAA	-17	NA	87193973	87211094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194283_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.4	chr12	+	3100	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-145	0	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194346	87211497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.5	chr12	+	1996	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-14	-3	intron_retention	FALSE	canonical	3	449	junction_4	43.2194211824608	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCTTTTGTCATGGA	NA	False	NA	10	True	NA	NA	NA	87194477	87211494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.6	chr12	+	4525	6	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-11	-2	intron_retention	FALSE	canonical	3	476	junction_5	37.72850381343	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	False	NA	11	True	NA	NA	NA	87194480	87211495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813
ES.8156.7	chr12	+	2568	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-11	1	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTCGATATATCTTCCT	NA	False	NA	17	True	ATTAAA	-22	NA	87194480	87211099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.8	chr12	+	1296	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	-10	155	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	181.023281849127	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGAAGGGCCTTTATAA	NA	False	NA	NA	False	NA	NA	NA	87194481	87211253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8156.9	chr12	+	1265	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	-10	401	-10	-2	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGTTCGATATATCTT	NA	False	NA	14	True	ATTAAA	-19	NA	87194481	87211096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ES.8157.1	chr12	-	3174	7	ISM	ENSMUSG00000034126.6	ENSMUST00000222634.2	2774	20	30000	-1942	7388	-1	3prime_fragment	FALSE	canonical	3	59	junction_5	6.99205898780101	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTCTTGTGCTTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	87164248	87153635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158358_87158652_87158725_87163304_87163382_87164158
ES.8157.10	chr12	-	2273	7	ISM	ENSMUSG00000034126.6	ENSMUST00000222634.2	2774	20	28946	13	6334	-13	intron_retention	FALSE	canonical	3	59	junction_5	6.99205898780101	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGGTATCTTTTC	NA	False	NA	0	True	CATAAA	-29	NA	87165302	87155590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158358_87158652_87158725_87163304_87163382_87164158
ES.8157.11	chr12	-	3168	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	-66	1962	0	-19	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGATATTCTCTGGTAT	5583	False	NA	-6	True	CATAAA	-23	NA	87194742	87155596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8157.13	chr12	-	4918	18	NIC	ENSMUSG00000034126.6	novel	2774	20	NA	NA	5	-21	intron_retention	FALSE	canonical	3	48	junction_13	10.733319721742	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGATATTCTCTGGT	6082	False	NA	-8	True	CATAAA	-21	NA	87194243	87155598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87156068_87156777_87156893_87157075_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8157.2	chr12	-	5123	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	-60	1	6	-1	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTCTTGTGCTTGAT	5589	False	NA	NA	False	AATAAA	-21	NA	87194736	87153635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8157.3	chr12	-	4798	10	NNC	ENSMUSG00000034126.6	novel	2774	20	NA	NA	-384	-5	intron_retention	FALSE	non_canonical	0	0	junction_7	24.2120263964465	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTGTTCTTGTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	87172020	87153639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87156068_87156777_87156893_87157075_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164861_87166345_87166425_87169615_87169686_87171585
ES.8157.4	chr12	-	4832	21	NNC	ENSMUSG00000034126.6	novel	5064	21	NA	NA	-144	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	18.1325673857841	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTGTTCTTGTGCT	5933	False	NA	NA	False	AATAAA	-17	NA	87194392	87153639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182435_87184776_87184882_87186417_87186503_87193944
ES.8157.6	chr12	-	4607	21	NNC	ENSMUSG00000034126.6	novel	5064	21	NA	NA	34	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	17.9064234284795	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACATTGTTCTTGTG	6111	False	NA	NA	False	AATAAA	-15	NA	87194214	87153641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164877_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8157.7	chr12	-	4759	15	NNC	ENSMUSG00000034126.6	novel	5064	21	NA	NA	-6866	-7	intron_retention	FALSE	canonical	0	0	junction_2	20.1134537165591	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACATTGTTCTTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	87178502	87153641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87156068_87156777_87156944_87157075_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445
ES.8157.8	chr12	-	4653	21	NNC	ENSMUSG00000034126.6	novel	5064	21	NA	NA	27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.1107702762748	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACATTGTTCTTGTG	6104	False	NA	NA	False	AATAAA	-15	NA	87194221	87153641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87156068_87156777_87156944_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8157.9	chr12	-	3443	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	455	1166	27	777	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCCAAGTCCAGTCCAT	6104	False	NA	NA	False	AGTAAA	-19	NA	87194221	87154800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ES.8158.1	chr12	-	7287	7	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.26312882106017	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7714	False	NA	4	True	AATAAA	-23	NA	87247259	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87219406_87220821_87220880_87221032_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ES.8158.10	chr12	-	2113	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	8	5288	8	-5288	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGGGTTTATGTTTT	7753	False	NA	NA	False	AATACA	-24	NA	87247220	87218298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ES.8158.11	chr12	-	174	1	Intergenic	novelGene_6748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAGAAATACA	NA	False	NA	NA	False	NA	NA	NA	87241462	87241288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87241300_87241500
ES.8158.12	chr12	-	3872	1	NIC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	81	-30265	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGCTAATTATTTCTGC	7826	False	NA	NA	False	NA	NA	NA	87247147	87243275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87243300_87247100
ES.8158.2	chr12	-	7233	7	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	7.38052994182818	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7828	False	NA	4	True	AATAAA	-23	NA	87247145	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87219406_87220821_87220880_87220972_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ES.8158.3	chr12	-	7273	6	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	129	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	9.76933979345585	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7874	False	NA	4	True	AATAAA	-23	NA	87247099	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223531_87228162_87228245_87246859
ES.8158.4	chr12	-	7440	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	-31	0	-31	0	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7714	False	NA	4	True	AATAAA	-23	NA	87247259	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ES.8158.5	chr12	-	7196	5	NIC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	83	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	10.4731800328267	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7828	False	NA	4	True	AATAAA	-23	NA	87247145	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87219406_87220821_87221128_87221314_87221442_87228162_87228245_87246859
ES.8158.6	chr12	-	11827	5	NIC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	207	0	intron_retention	FALSE	canonical	3	17	junction_3	4.74341649025257	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7952	False	NA	4	True	AATAAA	-23	NA	87247021	87213010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87228245_87246859
ES.8158.8	chr12	-	7299	6	NNC	ENSMUSG00000034111.7	novel	7409	6	NA	NA	193	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.1311401135312	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTGAGTTCTTTCT	7938	False	NA	0	True	AATAAA	-19	NA	87247035	87213014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223531_87228068_87228245_87246859
ES.8158.9	chr12	-	6961	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	115	333	115	-333	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGAGTCAACTTGTT	7860	False	NA	NA	False	TATAAA	-15	NA	87247113	87213343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ES.8159.1	chr12	+	159	1	Intergenic	novelGene_6749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAATAAATATTA	NA	False	NA	NA	False	NA	NA	NA	87253351	87253510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87253400_87253500
ES.816.1	chr1	-	182	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	75606787	75606605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_75606600_75606800
ES.8160.1	chr12	+	163	1	Intergenic	novelGene_6750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATAAATTATTG	NA	False	NA	NA	False	NA	NA	NA	87256028	87256191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87256000_87256200
ES.8161.1	chr12	-	3206	2	NNC	ENSMUSG00000072919.5	novel	656	5	NA	NA	8428	61	intron_retention	TRUE	canonical	3	45	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCAGTATTCTTGGGTG	NA	False	NA	-9	True	AATAAA	-19	NA	87271902	87267967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87271084_87271812
ES.8161.2	chr12	-	777	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8458	60	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	17.7451088722749	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCAGTATTCTTGGGT	NA	False	NA	-10	True	AATAAA	-18	NA	87271872	87267968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87268219_87269818_87269953_87270931_87271084_87271631
ES.8161.3	chr12	-	879	4	ISM	ENSMUSG00000072919.5	ENSMUST00000021423.8	1101	6	8445	-60	8445	60	3prime_fragment	FALSE	canonical	2	3	junction_3	18.6607133363712	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCAGTATTCTTGGGT	NA	False	NA	-10	True	AATAAA	-18	NA	87271885	87267968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87268219_87269818_87270042_87270931_87271084_87271631
ES.8161.4	chr12	-	686	4	NNC	ENSMUSG00000072919.5	novel	1101	6	NA	NA	8457	60	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	1.69967317119759	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCAGTATTCTTGGGT	NA	False	NA	-10	True	AATAAA	-18	NA	87271873	87267968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87268219_87269818_87270042_87270931_87271084_87271812
ES.8161.5	chr12	-	3295	2	ISM	ENSMUSG00000072919.5	ENSMUST00000221768.2	656	5	11978	-3101	8519	60	3prime_fragment	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCAGTATTCTTGGGT	NA	False	NA	-10	True	AATAAA	-18	NA	87271811	87267968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87271084_87271631
ES.8162.1	chr12	+	175	1	Intergenic	novelGene_6751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACAAAAC	7380	False	NA	NA	False	NA	NA	NA	87274108	87274283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87274100_87274300
ES.8163.1	chr12	-	1840	1	NIC	ENSMUSG00000072919.5	novel	1626	8	NA	NA	-793	-11673	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATGAGATAGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	87284582	87282742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87282700_87284600
ES.8164.1	chr12	+	173	1	Intergenic	novelGene_6752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAATTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	87292460	87292633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87292500_87292600
ES.8165.1	chr12	+	1332	9	NIC	ENSMUSG00000021037.8	novel	1933	6	NA	NA	19	-1	combination_of_known_junctions	TRUE	canonical	3	287	junction_1	889.533691042672	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGACTGACAGCCTTGT	NA	False	NA	16	True	AGTAAA	-34	NA	87313271	87320771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313433_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.10	chr12	+	3286	7	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	2699	junction_5	156.851309632191	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313470	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.11	chr12	+	1330	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	996.118270776618	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313470	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87313696_87314928_87315072_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.12	chr12	+	4208	5	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	-1	1	intron_retention	FALSE	canonical	3	2699	junction_3	173.1175539915	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313470	87320754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87316648_87319999_87320220_87320273_87320364
ES.8165.14	chr12	+	3507	6	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	1	1	intron_retention	FALSE	canonical	3	2874	junction_4	114.228893017485	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	False	NA	-1	True	AGTAAA	-17	NA	87313472	87320754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87317229_87318112_87318202_87319345_87319475_87319896_87320273_87320364
ES.8165.15	chr12	+	2941	7	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	2699	junction_5	151.693129559501	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313473	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87319999_87320220_87320273_87320364
ES.8165.17	chr12	+	1193	8	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1051.7928522678	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGCATTTCTTACA	NA	False	NA	-8	True	AGTAAA	-10	NA	87313475	87320747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318166_87319905_87319999_87320220_87320273_87320364
ES.8165.18	chr12	+	4378	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	7	-3008	-5	2989	multi-exon	FALSE	canonical	3	2699	junction_7	143.152890295656	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTACTCCCCCTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	87313478	87323761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.19	chr12	+	1360	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	983.657643377512	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313480	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87313688_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.20	chr12	+	1358	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1003.75568958537	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313484	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320226_87320273_87320364
ES.8165.24	chr12	+	1298	8	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	3	208	junction_2	974.232843140212	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGACTGACAGCCTTGT	NA	False	NA	16	True	AGTAAA	-34	NA	87313485	87320771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.25	chr12	+	7419	4	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	16	3407	intron_retention	FALSE	canonical	3	2981	junction_2	83.7137981458254	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGACCCCCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	87313499	87324179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87317229_87318112_87318202_87319345
ES.8165.26	chr12	+	5919	7	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	18	2987	intron_retention	FALSE	canonical	3	2699	junction_5	151.693129559501	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGCTACTCCCCCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	87313501	87323759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87319999_87320220_87320273_87320364
ES.8165.27	chr12	+	4832	5	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	25	-1	intron_retention	FALSE	canonical	3	2699	junction_3	173.019326955112	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGACTGACAGCCTTGT	NA	False	NA	16	True	AGTAAA	-34	NA	87313508	87320771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87317229_87318112_87319999_87320220_87320273_87320364
ES.8165.28	chr12	+	5803	3	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	29	-2	intron_retention	FALSE	canonical	3	2699	junction_2	243	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGACTGACAGCCTTG	NA	False	NA	15	True	AGTAAA	-33	NA	87313512	87320770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87319999_87320220
ES.8165.29	chr12	+	2864	8	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	29	-1	intron_retention	FALSE	canonical	3	2699	junction_6	153.034743287468	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTTCTTACAATCTA	NA	False	NA	-3	True	AGTAAA	-15	NA	87313512	87320752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.3	chr12	+	1491	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	-26	-88	-26	69	multi-exon	FALSE	canonical	3	2699	junction_7	143.152890295656	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGGCTGAGTGTAGGTA	NA	False	NA	86	True	TTTAAA	-26	NA	87313445	87320841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.30	chr12	+	4435	8	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	42	-3008	30	2989	intron_retention	FALSE	canonical	3	2699	junction_7	151.414689390644	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTACTCCCCCTGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	87313513	87323761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220
ES.8165.32	chr12	+	1207	8	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	47	-1	combination_of_known_splicesites	FALSE	canonical	1	11	junction_5	1047.97824794376	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGACTGACAGCCTTGT	NA	False	NA	16	True	AGTAAA	-34	NA	87313530	87320771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319896_87319999_87320220_87320273_87320364
ES.8165.33	chr12	+	6266	3	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	172	3375	intron_retention	FALSE	canonical	0	0	junction_2	1592.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87313655	87324147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87313696_87314928_87315120_87318112
ES.8165.4	chr12	+	1383	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	-18	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	989.562900666249	640	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGCATTTCTTACA	NA	False	NA	-8	True	AGTAAA	-10	NA	87313453	87320747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319351_87319475_87319896_87319999_87320220_87320273_87320364
ES.8165.5	chr12	+	4501	4	ISM	ENSMUSG00000021037.8	ENSMUST00000223352.2	739	6	208	-1330	-11	0	intron_retention	FALSE	canonical	3	2981	junction_3	55.1603722491669	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313460	87320753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87315120_87316648_87316732_87317110_87317229_87318112
ES.8165.9	chr12	+	6068	2	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	-2	-17	-2	-2	intron_retention	FALSE	canonical	3	3185	junction_1	0	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGACTGACAGCCTTG	NA	False	NA	15	True	AGTAAA	-33	NA	87313469	87320770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87313696_87314928
ES.8166.1	chr12	+	185	1	Intergenic	novelGene_6753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTATTTTATATATAT	NA	False	NA	NA	False	NA	NA	NA	87327157	87327342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87327200_87327300
ES.8167.1	chr12	+	2664	1	Intergenic	novelGene_6755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAGAATTCTGAAGGG	NA	False	NA	NA	False	AAGAAA	-10	NA	87346621	87349285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87346600_87349300
ES.8167.2	chr12	+	3303	2	Antisense	novelGene_ENSMUSG00000021036.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGGCTACAGAAGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	87346623	87352013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_87349319_87351405
ES.8167.3	chr12	+	1349	5	Antisense	novelGene_ENSMUSG00000021036.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_4	6.09815545882523	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACACAATAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	87346636	87357220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_87347023_87347116_87347291_87347591_87347783_87352843_87352918_87356696
ES.8167.4	chr12	+	1036	3	Intergenic	novelGene_6756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_2	1	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAATGAGCTTGTTGGG	NA	False	NA	NA	False	ATTAAA	-11	NA	87346641	87348072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87347023_87347116_87347291_87347591
ES.8167.5	chr12	+	1432	1	Intergenic	novelGene_6757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGCTTGTTGGGCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	87346644	87348076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87346600_87348100
ES.8167.6	chr12	+	1337	2	Intergenic	novelGene_6758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGCTTGTTGGGCATTC	NA	False	NA	NA	False	ATTAAA	-16	NA	87346646	87348077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87347023_87347116
ES.8167.7	chr12	+	1919	5	Antisense	novelGene_ENSMUSG00000021036.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_4	6.67083203206317	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATATGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	87346646	87356439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_87347291_87347591_87347783_87352843_87352918_87353609_87353641_87355460
ES.8167.8	chr12	+	3303	5	Antisense	novelGene_ENSMUSG00000021036.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	6.86931583201704	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGCTTTGGTCAAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	87346647	87355538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_87347023_87347116_87347291_87347591_87347783_87352843_87353190_87353321
ES.8167.9	chr12	+	2796	1	Intergenic	novelGene_6759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAAAGTTAATTCTGT	NA	False	NA	NA	False	NA	NA	NA	87346650	87349446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87346600_87349400
ES.8168.1	chr12	+	157	1	Intergenic	novelGene_6763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8266	False	NA	NA	False	NA	NA	NA	87382170	87382327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87382200_87382300
ES.8169.1	chr12	+	2819	1	Intergenic	novelGene_6764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGGGGGAAGGAAAGAT	9469	False	NA	NA	False	NA	NA	NA	87398123	87400942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87398100_87400900
ES.817.1	chr1	+	171	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTTTTTATTCTAG	NA	False	NA	NA	False	NA	NA	NA	75619443	75619614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_75619400_75619600
ES.8170.1	chr12	-	5088	20	Fusion	ENSMUSG00000021038.18_ENSMUSG00000072919.5	novel	2524	20	NA	NA	295	720	multi-exon	FALSE	canonical	0	0	junction_5	30.4033822291128	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTTTCCTCTGTGTCCT	NA	False	NA	NA	False	NA	NA	NA	87312688	87284921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291488_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87310869
ES.8170.10	chr12	-	3764	19	NIC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	1	-1	intron_retention	FALSE	canonical	3	87	junction_1	7.9364761904127	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTCTTCCCCATCTGG	NA	False	NA	-13	True	AATAAA	-18	NA	87313026	87285649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.12	chr12	-	3101	19	NIC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	11	-2	intron_retention	FALSE	canonical	3	87	junction_1	7.37299878686489	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTCTTCCCCATCTG	NA	False	NA	-14	True	AATAAA	-17	NA	87313016	87285650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87286611_87288010_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.13	chr12	-	2514	19	NNC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	24.1259554918569	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCCTCTTCCCCATC	NA	False	NA	-16	True	AATAAA	-15	NA	87313040	87285652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87298475_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.15	chr12	-	2485	21	NNC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	-413	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	30.1726283243605	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTCCTCTTCCCCAT	NA	False	NA	-17	True	AATAAA	-14	NA	87313443	87285653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87310869_87310903_87313403
ES.8170.16	chr12	-	4844	18	NIC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	10	-6	intron_retention	FALSE	canonical	3	87	junction_1	8.38807853990981	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCTCCTCTTCCCCA	NA	False	NA	-18	True	AATAAA	-13	NA	87313017	87285654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87286611_87288010_87288116_87288710_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.17	chr12	-	1328	17	ISM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	7076	854	5064	-852	3prime_fragment	FALSE	canonical	3	87	junction_1	8.79541784112614	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACACGTGAGCCTGTC	NA	False	NA	NA	False	AAAACA	-30	NA	87305954	87286500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854
ES.8170.18	chr12	-	2285	6	ISM	ENSMUSG00000021038.18	ENSMUST00000222350.2	1790	12	0	6213	0	-6213	5prime_fragment	FALSE	canonical	3	93	junction_3	3.16227766016838	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCACAAAAACCTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	87313027	87301516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.2	chr12	-	3253	20	FSM	ENSMUSG00000021038.18_ENSMUSG00000072919.5	ENSMUST00000072744.15	2524	20	-10	-719	-10	714	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGATTACTTTCCTCTG	NA	False	NA	NA	False	TTTAAA	-44	NA	87313040	87284927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.3	chr12	-	2318	17	NNC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	25.5657852412164	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTGGTTACTTAGTCC	NA	False	NA	-2	True	AATAAA	-29	NA	87313023	87285638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293657_87299398_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8170.5	chr12	-	2509	20	NNC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	-154	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	30.9088553770634	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCCCATCTGGTTAC	NA	False	NA	-9	True	AATAAA	-22	NA	87313184	87285645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299972_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87313062
ES.8170.9	chr12	-	2347	18	NNC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	24.8074941238708	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCTTCCCCATCTGGT	NA	False	NA	-12	True	AATAAA	-19	NA	87313051	87285648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293655_87298569_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ES.8171.1	chr12	-	5790	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-45	3303	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	39.8834238750888	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTAGATTGATTAGCT	7624	False	NA	NA	False	ATTAAA	-19	NA	87346524	87322108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87326977_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.10	chr12	-	2902	6	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-84	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	35.5831420759887	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7585	False	NA	-6	True	AATAAA	-14	NA	87346563	87325418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333369_87333912_87346347
ES.8171.11	chr12	-	2089	4	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.7262385167301	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7654	False	NA	-6	True	AATAAA	-14	NA	87346494	87325418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87326977_87329419_87329561_87333668_87333912_87346347
ES.8171.12	chr12	-	1612	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-36	3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTAGAGCATGCTCCTT	7633	False	NA	NA	False	ACTAAA	-3	NA	87346515	87326452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.13	chr12	-	3046	4	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-67	-862	intron_retention	FALSE	canonical	3	86	junction_2	4.49691252107735	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTAGTGTTTTGCCTGCA	7602	False	NA	NA	False	TATAAA	-35	NA	87346546	87327317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.14	chr12	-	1050	2	ISM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-135	7717	-135	-3935	5prime_fragment	FALSE	canonical	3	97	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTCTGCTTGGTTTGTT	7534	False	NA	NA	False	AAGAAA	-42	NA	87346614	87333128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87333912_87346347
ES.8171.15	chr12	-	169	1	Intergenic	novelGene_6754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAAGGAAGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	87340353	87340184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87340200_87340400
ES.8171.16	chr12	-	2045	1	Genic_Genomic	ENSMUSG00000050671.13	novel	NA	NA	NA	NA	-72	-15313	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCATTTCTGTTCAC	7597	False	NA	NA	False	NA	NA	NA	87346551	87344506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_87344500_87346600
ES.8171.2	chr12	-	3396	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-96	-774	-96	774	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCTAGTGATATTAGAG	7573	False	NA	NA	False	ACTAAA	-21	NA	87346575	87324637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.3	chr12	-	2757	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	-232	1	-232	-1	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGATAAAGGATTTGGG	7437	False	NA	0	True	AATAAA	-20	NA	87346711	87325412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.4	chr12	-	2728	6	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-97	-5	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	30.7310917476096	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTTTGATAAAGGATT	7572	False	NA	-4	True	AATAAA	-16	NA	87346576	87325416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87326977_87329073_87329268_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.5	chr12	-	2819	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-207	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTTTGATAAAGGATT	7462	False	NA	-4	True	AATAAA	-16	NA	87346686	87325416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.6	chr12	-	2830	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-47	-5	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTTTGATAAAGGATT	7622	False	NA	-4	True	AATAAA	-16	NA	87346526	87325416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
ES.8171.7	chr12	-	2473	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-59	-7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	31.9426569548204	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7610	False	NA	-6	True	AATAAA	-14	NA	87346538	87325418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332020_87332124_87332161_87333668_87333912_87346347
ES.8171.9	chr12	-	2756	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-36	-7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	42.0294209122874	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAGTTTGATAAAGGA	7633	False	NA	-6	True	AATAAA	-14	NA	87346515	87325418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87326977_87328088_87328180_87329073_87329268_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ES.8172.1	chr12	-	6491	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTTATTCATTCA	8783	False	NA	NA	False	AATAAA	-16	NA	87435042	87351831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353225_87353356_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.10	chr12	-	6438	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	21	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGACACCTGCCTTTAT	8831	False	NA	NA	False	AATAAA	-9	NA	87434994	87351838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353243_87353372_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.11	chr12	-	3223	2	NNC	ENSMUSG00000021036.11	novel	3769	6	NA	NA	20195	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGACACCTGCCTTTAT	NA	False	NA	NA	False	AATAAA	-9	NA	87355192	87351838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353204_87353334
ES.8172.12	chr12	-	3710	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	51	2949	51	63	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTGTTATTGTTTGTC	8747	False	NA	NA	False	NA	NA	NA	87435078	87354780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.13	chr12	-	3473	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	18	3219	18	-207	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCCTATAAAGCTCAAAT	8714	False	NA	NA	False	AATAAA	-15	NA	87435111	87355050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.14	chr12	-	3136	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	37	3537	37	-525	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTCTGAGGACCTGT	8733	False	NA	NA	False	GATAAA	-12	NA	87435092	87355368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.15	chr12	-	2911	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	110	3689	-4	-677	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTGTGCTGAAGATG	8806	False	NA	NA	False	NA	NA	NA	87435019	87355520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.16	chr12	-	2767	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	101	3842	-13	739	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAATAGCCTGTTTT	8797	False	NA	NA	False	NA	NA	NA	87435028	87355673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.17	chr12	-	2054	12	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-12	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	167.079087523254	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTACTTGTGAAATCACG	8798	False	NA	-5	True	ATTAAA	-20	NA	87435027	87356406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402470_87403321_87403477_87415704_87415900_87434819
ES.8172.18	chr12	-	3031	14	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-11429	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	208.283517515523	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTACTTGTGAAATCACG	NA	False	NA	-5	True	ATTAAA	-20	NA	87446558	87356406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819_87435711_87438409_87438601_87446434
ES.8172.19	chr12	-	2893	11	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	1	6	intron_retention	FALSE	canonical	3	499	junction_2	40.8161732650184	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTACTTGTGAAATCACG	8811	False	NA	-5	True	ATTAAA	-20	NA	87435014	87356406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87403477_87415704_87415900_87434819
ES.8172.2	chr12	-	6551	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	27	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTTATTCATTCA	8723	False	NA	NA	False	AATAAA	-16	NA	87435102	87351831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353286_87353417_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.20	chr12	-	2075	12	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-27	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	168.808708795753	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTACTTGTGAAATCAC	8783	False	NA	-6	True	ATTAAA	-19	NA	87435042	87356407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393604_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.21	chr12	-	5667	10	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-18601	5	intron_retention	FALSE	canonical	0	0	junction_6	186.168382564459	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTACTTGTGAAATCAC	5259	False	NA	-6	True	ATTAAA	-19	NA	87415756	87356407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87393604_87397034_87397160_87402299_87402449_87403321_87403477_87415704
ES.8172.22	chr12	-	1991	12	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_9	163.72618746801	408	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTACTTGTGAAATCA	8791	False	NA	-7	True	ATTAAA	-18	NA	87435034	87356408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403368_87403477_87415704_87415900_87434819
ES.8172.23	chr12	-	3334	7	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-1129	2	intron_retention	FALSE	canonical	3	499	junction_2	41.8399729126745	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTCTACTTGTGAAAT	NA	False	NA	-9	True	ATTAAA	-16	NA	87398284	87356410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87389524_87393481_87393576_87397034
ES.8172.24	chr12	-	1833	11	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	171.988517058552	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTATTCTACTTGTGAAA	8798	False	NA	-10	True	ATTAAA	-15	NA	87435027	87356411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87434819
ES.8172.25	chr12	-	2238	2	ISM	ENSMUSG00000021036.11	ENSMUST00000170720.2	704	4	14060	0	14060	0	intron_retention	FALSE	canonical	3	597	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	7698	False	NA	-11	True	ATTAAA	-14	NA	87361327	87356412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87356795_87359471
ES.8172.26	chr12	-	1599	9	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	192.475810168447	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	8797	False	NA	-11	True	ATTAAA	-14	NA	87435028	87356412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87415704_87415900_87434819
ES.8172.27	chr12	-	6075	11	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	11	-1	intron_retention	FALSE	canonical	3	499	junction_2	40.3436488186183	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTATTCTACTTGTGA	8707	False	NA	-12	True	ATTAAA	-13	NA	87435118	87356413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.28	chr12	-	174	1	Intergenic	novelGene_6760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAAAAGAGTC	8515	False	NA	NA	False	NA	NA	NA	87360510	87360336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87360300_87360500
ES.8172.29	chr12	-	174	1	Intergenic	novelGene_6761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	6095	False	NA	NA	False	NA	NA	NA	87362930	87362756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87362800_87362900
ES.8172.3	chr12	-	6454	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTTATTCATTCA	8791	False	NA	NA	False	AATAAA	-16	NA	87435034	87351831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353176_87353336_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.30	chr12	-	4957	1	Intergenic	novelGene_6762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTAAACTGAAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	87373023	87368066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87368100_87373000
ES.8172.31	chr12	-	3602	11	NNC	ENSMUSG00000021036.11	novel	763	5	NA	NA	-38	14207	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.847340641566	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGTTTTTTAATAGA	8772	False	NA	NA	False	ATTAAA	-13	NA	87435053	87379024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87380331_87380901_87381793_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.32	chr12	-	4804	1	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	8	7421	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87390614	87385810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87385800_87390600
ES.8172.33	chr12	-	1177	3	ISM	ENSMUSG00000021036.11	ENSMUST00000167911.2	763	5	19	9164	19	-9164	5prime_fragment	FALSE	canonical	3	556	junction_2	8	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAATTTTTATTCTTT	8829	False	NA	NA	False	AATAAA	-17	NA	87434996	87402671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87403477_87415704_87415900_87434819
ES.8172.34	chr12	-	178	1	Intergenic	novelGene_6765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87430345	87430167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87430200_87430300
ES.8172.4	chr12	-	6481	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-17	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCCTTTATTCATTCA	8793	False	NA	NA	False	AATAAA	-16	NA	87435032	87351831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353258_87353389_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.5	chr12	-	6479	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	-17	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCCTTTATTCATTC	8793	False	NA	NA	False	AATAAA	-15	NA	87435032	87351832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353298_87353430_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.6	chr12	-	6320	11	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	38	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	234.471085637441	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGCCTTTATTCATTC	8734	False	NA	NA	False	AATAAA	-15	NA	87435091	87351832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353225_87353356_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8172.9	chr12	-	6514	13	NNC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	56	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	161.649225863356	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGACACCTGCCTTTAT	8752	False	NA	NA	False	AATAAA	-9	NA	87435073	87351838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87353210_87353342_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ES.8173.1	chr12	-	136	1	Intergenic	novelGene_6766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAGAAAA	2730	False	NA	NA	False	NA	NA	NA	87456737	87456601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87456600_87456700
ES.8174.1	chr12	-	4085	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	-18	-1913	-15	2	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTTTTGCCTTCTTAT	NA	False	NA	0	True	ATTAAA	-17	NA	87490624	87472936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.10	chr12	-	3752	6	NNC	ENSMUSG00000079036.11	novel	3857	6	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	116.671504661592	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490588	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478280_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.11	chr12	-	3680	5	NIC	ENSMUSG00000079036.11	novel	2019	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	125.643095711623	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490596	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87490411
ES.8174.12	chr12	-	6099	6	NIC	ENSMUSG00000079036.11	novel	2019	7	NA	NA	-30	0	intron_retention	FALSE	canonical	3	24	junction_4	102.670346254408	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490639	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.13	chr12	-	3925	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	117.542072845807	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGTGTTTTGCCTTCT	NA	False	NA	-3	True	ATTAAA	-14	NA	87490605	87472939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87490411
ES.8174.14	chr12	-	3715	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	743	-2	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTGTTTTGCCTTC	NA	False	NA	-4	True	ATTAAA	-13	NA	87484586	87472940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
ES.8174.15	chr12	-	6376	5	NIC	ENSMUSG00000079036.11	novel	3857	6	NA	NA	1	-2	intron_retention	FALSE	canonical	3	188	junction_4	51.2219435398541	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGTGTTTTGCCTTC	NA	False	NA	-4	True	ATTAAA	-13	NA	87490605	87472940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.17	chr12	-	6146	6	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	-26	intron_retention	FALSE	canonical	3	83	junction_5	95.6200815728579	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTAATTAAATTTTCTTT	NA	False	NA	-28	True	GATAAA	-19	NA	87490608	87472964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040
ES.8174.18	chr12	-	6559	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-1	-29	intron_retention	FALSE	canonical	3	77	junction_5	107.170295428455	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGTAATTAAATTTTC	NA	False	NA	-31	True	GATAAA	-16	NA	87490604	87472967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.2	chr12	-	4024	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTTTTGCCTTCTTAT	NA	False	NA	0	True	ATTAAA	-17	NA	87490618	87472936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.20	chr12	-	3739	4	NNC	ENSMUSG00000079036.11	novel	1042	5	NA	NA	743	-33	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	112.570965271789	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAAAGTGGTAATTAAAT	NA	False	NA	-35	True	GATAAA	-12	NA	87484586	87472971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87484201
ES.8174.21	chr12	-	3768	6	NIC	ENSMUSG00000079036.11	novel	2019	7	NA	NA	1	512	intron_retention	FALSE	canonical	3	98	junction_5	91.3520662054231	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTATTTTTCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	87490605	87474334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87488551_87490411
ES.8174.22	chr12	-	2319	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	743	510	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTATTTTTCTGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	87484586	87474336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
ES.8174.23	chr12	-	2666	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	1	-513	1	510	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTATTTTTCTGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	87490605	87474336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.24	chr12	-	2523	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	6	-510	6	510	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTATTTTTCTGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	87490590	87474336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.25	chr12	-	2455	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	4	1398	1	510	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTATTTTTCTGTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	87490605	87474336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.26	chr12	-	2589	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	508	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAAGCTATTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	87490603	87474338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.27	chr12	-	2471	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	508	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	119.501394692001	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAAGCTATTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	87490605	87474338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87490411
ES.8174.29	chr12	-	2608	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-1	508	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAAGCTATTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	87490604	87474338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.3	chr12	-	3932	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-5	-1908	2	0	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490601	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.30	chr12	-	5592	3	ISM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	6019	-508	742	505	3prime_fragment	FALSE	canonical	3	174	junction_2	77.5	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAACAAGCTATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	87484587	87474341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87476041_87478169_87478364_87480888
ES.8174.31	chr12	-	2205	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-7	-179	0	179	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTGTTTCTTTCTA	NA	False	NA	NA	False	AATACA	-19	NA	87490603	87474667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.32	chr12	-	2165	7	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-1	178	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	119.756233890164	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTGGTGTTTCTTTCT	NA	False	NA	NA	False	AATACA	-18	NA	87490604	87474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488139_87490411
ES.8174.33	chr12	-	2042	4	NNC	ENSMUSG00000079036.11	novel	1042	5	NA	NA	743	178	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	112.570965271789	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTGGTGTTTCTTTCT	NA	False	NA	NA	False	AATACA	-18	NA	87484586	87474668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87484201
ES.8174.34	chr12	-	2004	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	122	1731	109	177	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTGGTGTTTCTTTC	NA	False	NA	NA	False	AATACA	-17	NA	87490487	87474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.35	chr12	-	2333	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	1	-180	1	177	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTTGGTGTTTCTTTC	NA	False	NA	NA	False	AATACA	-17	NA	87490605	87474669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.36	chr12	-	3667	7	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.12764971441	390	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAATTTTGGTGTTTC	NA	False	NA	NA	False	AATACA	-13	NA	87490605	87474673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87475345_87478660_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.37	chr12	-	1932	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-31	-18	-20	18	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGGTGTGTCAGGCGT	NA	False	NA	-35	True	AATAAA	-40	NA	87490629	87474828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.38	chr12	-	1818	4	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	744	10	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	115.494107593803	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGAGGGTTGGTGTG	NA	False	NA	-43	True	AATAAA	-32	NA	87484585	87474836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87484201
ES.8174.39	chr12	-	4362	4	NIC	ENSMUSG00000079036.11	novel	3857	6	NA	NA	-1	2	intron_retention	FALSE	canonical	3	11	junction_3	140.326603164031	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATCTGTCTTTGAGGG	NA	False	NA	-51	True	AATAAA	-24	NA	87490604	87474844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87490411
ES.8174.4	chr12	-	3856	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	1	0	1	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490608	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.40	chr12	-	4019	5	NIC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	134	junction_1	63.4448579476698	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490605	87474846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.41	chr12	-	4230	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	77	junction_5	88.6052418815551	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490605	87474846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.42	chr12	-	5343	2	NNC	ENSMUSG00000079036.11	novel	1883	6	NA	NA	3498	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87481831	87474846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87479700_87481341
ES.8174.43	chr12	-	4682	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	77	junction_5	107.170295428455	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490606	87474846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.44	chr12	-	2155	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	0	-1	0	1	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCTGTATCTGTCTTTG	NA	False	NA	-55	True	AATAAA	-20	NA	87490606	87474848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.45	chr12	-	1945	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	1	1911	1	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490608	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.46	chr12	-	1822	5	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	122.397661333867	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490594	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87490411
ES.8174.47	chr12	-	2083	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490608	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.48	chr12	-	4597	6	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	24	junction_4	119.52070950258	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490597	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.49	chr12	-	2026	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	-10	3	0	0	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.5	chr12	-	3799	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-8	-1908	0	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490606	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.50	chr12	-	2101	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490608	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.51	chr12	-	4643	5	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_1	121.545259060154	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490602	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87475345_87478660_87480980_87485166_87485330_87487075_87488551_87490411
ES.8174.52	chr12	-	5028	3	ISM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	6010	3	743	0	3prime_fragment	FALSE	canonical	3	134	junction_2	97.5	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484586	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87476041_87478169_87478309_87480888
ES.8174.53	chr12	-	1861	4	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	743	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_3	112.570965271789	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484586	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87484201
ES.8174.54	chr12	-	5083	3	ISM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	6020	0	743	0	3prime_fragment	FALSE	canonical	3	174	junction_2	77.5	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87484586	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87476041_87478169_87478364_87480888
ES.8174.55	chr12	-	2408	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	83	junction_5	98.7668410393331	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490616	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488551_87490411
ES.8174.56	chr12	-	4093	6	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_5	110.428981703174	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490609	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87490411
ES.8174.57	chr12	-	1919	6	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	121.1798663145	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490608	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87488412_87488551_87490411
ES.8174.58	chr12	-	1985	7	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	119.756233890164	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490605	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488139_87490411
ES.8174.59	chr12	-	5115	5	ISM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	-8	3	0	0	intron_retention	FALSE	canonical	3	134	junction_2	73.4247063324056	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075
ES.8174.6	chr12	-	3994	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490608	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ES.8174.60	chr12	-	1856	6	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	116.671504661592	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490603	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478280_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.61	chr12	-	1778	5	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	125.643095711623	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490605	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87490411
ES.8174.62	chr12	-	4468	5	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	188	junction_4	51.2219435398541	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.63	chr12	-	2031	7	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	117.810582433554	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490596	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488139_87490411
ES.8174.64	chr12	-	2190	9	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.555647704149	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490624	87474849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480592_87480666_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8174.65	chr12	-	4242	6	NNC	ENSMUSG00000079036.11	novel	3857	6	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	117.40766584853	389	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGACCTGTATCTGTCT	NA	False	NA	-58	True	AATAAA	-17	NA	87490605	87474851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87480666_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ES.8174.66	chr12	-	6481	3	FSM	ENSMUSG00000079036.11	ENSMUST00000162986.2	1319	3	2	-5164	2	-2	multi-exon	FALSE	canonical	3	11	junction_2	136	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGACCTGTATCTGTCT	NA	False	NA	-58	True	AATAAA	-17	NA	87490601	87474851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87480980_87485166_87485330_87490411
ES.8174.67	chr12	-	1808	7	NNC	ENSMUSG00000079036.11	novel	2019	7	NA	NA	39	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	145.898842429343	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGACCTGTATCTGTC	NA	False	NA	-59	True	AATAAA	-16	NA	87488457	87474852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478309_87480592_87480666_87480888_87480980_87485166_87485330_87487075_87487185_87488412
ES.8174.68	chr12	-	1956	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	119.501394692001	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGACCTGTATCTG	NA	False	NA	-61	True	AATAAA	-14	NA	87490606	87474854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87490411
ES.8174.69	chr12	-	1189	1	FSM	ENSMUSG00000079036.11	ENSMUST00000091090.5	1335	1	169	-23	-9	23	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTGTGGAGACAGA	NA	False	NA	NA	False	NA	NA	NA	87490618	87489429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87489400_87490600
ES.8174.70	chr12	-	493	1	FSM	ENSMUSG00000079036.11	ENSMUST00000185301.2	408	1	87	-172	2	172	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAATTGCTTGTACCT	NA	False	NA	NA	False	NA	NA	NA	87490601	87490108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87490100_87490600
ES.8174.8	chr12	-	7953	8	NNC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.05898233146	396	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490625	87472938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87476041_87478169_87478364_87480888_87480980_87481297_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ES.8175.1	chr12	+	426	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	-8	2283	-8	-1	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTTTTATTTGAAATGAG	NA	False	NA	35	True	AATAAA	-22	NA	87490657	87496693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ES.8175.10	chr12	+	411	4	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	1718.42764047706	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490684	87496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87490797_87494333_87494393_87496062_87496171_87496556
ES.8175.11	chr12	+	362	4	FSM	ENSMUSG00000021040.16	ENSMUST00000077462.8	335	4	-13	-14	11	-2	multi-exon	FALSE	canonical	3	41	junction_2	1742.05708542771	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490692	87496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87490797_87494333_87494369_87496062_87496171_87496573
ES.8175.2	chr12	+	468	5	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1867.6467144511	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACACGTTTTTATTTGA	NA	False	NA	29	True	AATAAA	-16	NA	87490681	87496687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87490797_87494333_87494393_87494615_87494688_87496062_87496171_87496573
ES.8175.3	chr12	+	6006	1	NIC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACACGTTTTTATTTGA	NA	False	NA	29	True	AATAAA	-16	NA	87490681	87496687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87490700_87496700
ES.8175.4	chr12	+	2067	3	NIC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	0	-2	intron_retention	FALSE	canonical	3	3665	junction_2	69.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490681	87496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87490797_87494333_87496171_87496573
ES.8175.5	chr12	+	2469	2	ISM	ENSMUSG00000021040.16	ENSMUST00000160488.8	802	3	1	2	1	-2	intron_retention	FALSE	canonical	3	3804	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACACGTTTTTATTTGAA	NA	False	NA	30	True	AATAAA	-17	NA	87490682	87496688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_87490797_87494333
ES.8175.6	chr12	+	798	3	FSM	ENSMUSG00000021040.16	ENSMUST00000160488.8	802	3	1	3	1	-3	multi-exon	FALSE	canonical	3	3495	junction_2	154.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACACGTTTTTATTTGA	NA	False	NA	29	True	AATAAA	-16	NA	87490682	87496687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87490797_87494333_87494393_87496062
ES.8175.7	chr12	+	1491	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	17	1193	1	1089	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGATCTGAATACTT	NA	False	NA	NA	False	AATAAA	-14	NA	87490682	87497783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ES.8175.8	chr12	+	336	3	NIC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	1806.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACACGTTTTTATTTGA	NA	False	NA	29	True	AATAAA	-16	NA	87490682	87496687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_87490797_87496062_87496171_87496573
ES.8175.9	chr12	+	379	4	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_2	1683.16388586099	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACACGTTTTTATTTGA	NA	False	NA	29	True	AATAAA	-16	NA	87490682	87496687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87490797_87494333_87494377_87496062_87496171_87496573
ES.8176.1	chr12	+	201	1	Intergenic	novelGene_6767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTATTTTAAAAAGATGG	NA	False	NA	-6	True	AAAACA	-3	NA	87504456	87504657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87504500_87504700
ES.8177.1	chr12	+	4805	1	Antisense	novelGene_ENSMUSG00000021039.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGGGCTGGAGAGAT	NA	False	NA	NA	False	AAGAAA	-13	NA	87509998	87514803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_87510000_87514800
ES.8178.1	chr12	+	190	1	Intergenic	novelGene_6768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCACGTTCTCTTTTCC	494	False	NA	NA	False	NA	NA	NA	87514811	87515001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_87514800_87515000
ES.8179.1	chr12	-	3088	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	6	-862	1	27	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCACTGATGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	87519038	87495817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.10	chr12	-	2178	15	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-25	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.400988373836	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	87519069	87496689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497158_87497226_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.12	chr12	-	1754	13	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.951745627965	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	87519043	87496689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497184_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.14	chr12	-	4608	12	NIC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	0	-10	intron_retention	FALSE	canonical	3	814	junction_11	88.197468152038	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	87519044	87496689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.15	chr12	-	2315	15	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-3	-10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	331.534258087629	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	False	NA	-12	True	AATAAA	-10	NA	87519047	87496689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87504148_87504239_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.17	chr12	-	2199	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	1	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	274.030728635835	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGTCTCAATTCTGT	NA	False	NA	-14	True	AATAAA	-8	NA	87519038	87496691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497487_87497590_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.18	chr12	-	2268	15	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4943	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	331.480114526544	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGTCTCAATTCTGT	NA	False	NA	-14	True	AATAAA	-8	NA	87523987	87496691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497157_87497283_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
ES.8179.2	chr12	-	2677	1	FSM	ENSMUSG00000021039.10	ENSMUST00000222579.2	5083	1	2433	-27	2433	27	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCACTGATGGTTTTA	NA	False	NA	NA	False	NA	NA	NA	87498494	87495817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87495800_87498500
ES.8179.21	chr12	-	1956	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-28	304	-28	-304	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGGAGTAGTTTTTTTA	NA	False	NA	13	True	NA	NA	NA	87519072	87496983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.22	chr12	-	1818	15	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-2	-304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	264.400988373836	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGGAGTAGTTTTTTTA	NA	False	NA	13	True	NA	NA	NA	87519046	87496983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497148_87497259_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.23	chr12	-	1832	15	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4928	-388	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	331.480114526544	548	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATTAA	NA	False	NA	-71	True	NA	NA	NA	87523972	87497067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497126_87497297_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
ES.8179.24	chr12	-	2763	1	NIC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	8220	10504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGATCTCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	87510819	87508056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87508100_87510800
ES.8179.25	chr12	-	947	5	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-23	11377	-23	10504	5prime_fragment	FALSE	canonical	3	814	junction_4	99.2874614440313	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGATCTCTTAAGT	NA	False	NA	NA	False	NA	NA	NA	87519067	87508056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.26	chr12	-	2185	2	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4931	1369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	87523975	87517191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87519187_87523785
ES.8179.3	chr12	-	4235	7	NIC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-7512	5	intron_retention	FALSE	canonical	3	831	junction_4	113.136716704466	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	87508439	87495839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87506261_87507176
ES.8179.4	chr12	-	2274	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	-42	0	-42	0	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87519086	87496679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.5	chr12	-	6929	11	NIC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-3	0	intron_retention	FALSE	canonical	3	814	junction_10	80.7629246622483	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87519047	87496679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87497487_87497575_87500725_87502359_87502502_87503621_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.6	chr12	-	2406	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4942	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	244.437985988436	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87523986	87496679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
ES.8179.7	chr12	-	2224	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	274.351370611143	549	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTCTGTTTATTTAGTG	NA	False	NA	-4	True	AATAAA	-18	NA	87519047	87496681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505720_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.8179.8	chr12	-	2692	13	NIC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	814	junction_12	100.406534758562	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAATTCTGTTTATTTA	NA	False	NA	-7	True	AATAAA	-15	NA	87519047	87496684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ES.818.1	chr1	-	228	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATTTTAAGCTTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	76727015	76726787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_76726800_76727000
ES.8180.1	chr12	+	3164	2	Genic_Genomic	ENSMUSG00000112943.2	novel	2729	1	NA	NA	-1964	119	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACGTGCCTCAAGAGCT	NA	False	NA	NA	False	AATAAA	-12	NA	87524913	87529725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87525106_87526753
ES.8181.1	chr12	+	1858	2	FSM	ENSMUSG00000079034.3	ENSMUST00000110152.3	1873	2	2	13	2	-13	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAATATCAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	87561087	87565023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87561276_87563353
ES.8182.1	chr12	+	1203	2	NNC	ENSMUSG00000092019.5	novel	1850	2	NA	NA	1	-59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGTTCATTATATC	NA	False	NA	NA	False	ATTAAA	-31	NA	87665639	87669666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_87665828_87668651
ES.8182.2	chr12	+	1846	2	FSM	ENSMUSG00000092019.5	ENSMUST00000164838.3	1850	2	1	3	1	-3	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAAAGAAAAAGATTAA	NA	False	NA	NA	False	AATAAA	-15	NA	87665639	87669722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87665828_87668064
ES.8183.1	chr12	+	3209	2	Genic_Genomic	ENSMUSG00000112949.2	novel	2773	1	NA	NA	-1955	123	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGTGCCTCAAGAGCTT	NA	False	NA	NA	False	AATAAA	-13	NA	87745957	87750808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87746147_87747788
ES.8184.1	chr12	+	1839	3	Fusion	ENSMUSG00000079031.2_ENSMUSG00000113971.2	novel	1851	2	NA	NA	-23995	918	multi-exon	FALSE	canonical	0	0	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATCAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	87759351	87863492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_87759540_87785785_87786002_87862057
ES.8184.2	chr12	+	1857	3	Fusion	ENSMUSG00000079031.2_ENSMUSG00000113971.2	novel	1851	2	NA	NA	0	918	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATCAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	87783346	87863492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_87783537_87785769_87786002_87862057
ES.8184.3	chr12	+	1083	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	5	678	5	-678	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGTTGAGTTATCTAA	NA	False	NA	NA	False	NA	NA	NA	87840846	87843951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87841033_87843054
ES.8184.4	chr12	+	1848	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	5	-87	5	87	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATTCATTCTGATGGT	NA	False	NA	NA	False	AATAAA	-29	NA	87840846	87844716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_87841033_87843054
ES.8184.5	chr12	+	1928	1	Genic_Genomic	ENSMUSG00000072905.6	novel	NA	NA	NA	NA	1954	94	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGATGGTCTCTGCT	NA	False	NA	NA	False	AATAAA	-36	NA	87842795	87844723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87842800_87844700
ES.8184.6	chr12	+	1850	2	Genic_Genomic	ENSMUSG00000113971.2	novel	435	1	NA	NA	-2564	918	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATCAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	87859575	87863492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87859763_87861829
ES.8185.1	chr12	+	1850	2	Genic_Genomic	ENSMUSG00000096049.2	novel	435	1	NA	NA	-2530	922	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	87976087	87979974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87976276_87978312
ES.8185.2	chr12	+	1024	2	Genic_Genomic	ENSMUSG00000096049.2	novel	435	1	NA	NA	-2528	98	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTCTTGTTAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	87976089	87979150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_87976276_87978312
ES.8186.1	chr12	-	1045	3	Fusion	ENSMUSG00000095724.2_ENSMUSG00000096803.2	novel	1863	2	NA	NA	-59545	-813	multi-exon	TRUE	non_canonical	0	0	junction_1	3	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGAATTTTATTTT	NA	False	NA	NA	False	AGTAAA	-34	NA	88045086	87740007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_87740227_87985210_87985852_88044901
ES.8186.2	chr12	-	205	1	Intergenic	novelGene_6769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTCTAAAACTTAATAGA	NA	False	NA	NA	False	AATAAA	-4	NA	87785287	87785082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_87785100_87785300
ES.8186.3	chr12	-	1261	3	Genic_Genomic	ENSMUSG00000096619.2	novel	435	1	NA	NA	-2586	5859	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAATAGATCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	87889213	87880333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_87880695_87885635_87886346_87889023
ES.8186.4	chr12	-	1050	2	Genic_Genomic	ENSMUSG00000096803.2	novel	435	1	NA	NA	-2507	113	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACTGATGTATTTTATG	NA	False	NA	NA	False	AGTAAA	-32	NA	87988048	87984993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_87985852_87987856
ES.8187.1	chr12	-	1846	2	Genic_Genomic	ENSMUSG00000113348.2	novel	431	1	NA	NA	-2529	920	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	88109092	88105212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_88106869_88108902
ES.8188.1	chr12	-	1028	2	Genic_Genomic	ENSMUSG00000095799.2	novel	435	1	NA	NA	-2768	96	multi-exon	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGTGTCTTGTTAATGCA	NA	False	NA	NA	False	AATAAA	-15	NA	88219638	88216339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_88217181_88219451
ES.8189.1	chr12	-	1857	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	3	-20	3	20	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGATGGTCTCTGCT	NA	False	NA	NA	False	AATAAA	-36	NA	88241267	88237389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_88239059_88241079
ES.819.1	chr1	+	1703	1	Antisense	novelGene_ENSMUSG00000026235.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGGTCATTATTGACA	NA	False	NA	NA	False	NA	NA	NA	77375063	77376766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_77375100_77376800
ES.8190.1	chr12	-	1435	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	-2	423	-2	-423	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAATGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	88290798	88287314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_88288562_88290610
ES.8190.2	chr12	-	933	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	90	833	90	92	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATGTGTGTCTTGTTAA	NA	False	NA	NA	False	AATAAA	-11	NA	88290706	88287724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_88288562_88290610
ES.8191.1	chr12	+	2057	10	NIC	ENSMUSG00000021044.16	novel	2158	11	NA	NA	-42	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.9526281451896	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTCCTTCTCAATCA	NA	False	NA	13	True	AATAAA	-26	NA	88327281	88428492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327366_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.10	chr12	+	2255	11	NNC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.4756491893967	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTCCTTCTCAATCA	NA	False	NA	13	True	AATAAA	-26	NA	88327381	88428492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368911_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.11	chr12	+	3357	10	NIC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	17	junction_1	18.6990459913776	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327419	88428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88423705_88425779_88425974_88427784
ES.8191.12	chr12	+	4161	9	NIC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	6	0	intron_retention	FALSE	canonical	3	5	junction_4	27.1880028689126	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327423	88428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88425974_88427784
ES.8191.13	chr12	+	2309	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	-102	-8	-28	2	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTTCTCAATCATTGT	NA	False	NA	17	True	AATAAA	-30	NA	88327556	88428496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.14	chr12	+	2224	11	NNC	ENSMUSG00000021044.16	novel	2199	11	NA	NA	33	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	27.9143332358127	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTCCTTCTCAATCAT	NA	False	NA	14	True	AATAAA	-27	NA	88327617	88428493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_88327743_88335104_88335230_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.15	chr12	+	9331	1	Intergenic	novelGene_6770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTGTATTTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88354447	88363778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_88354400_88363800
ES.8191.16	chr12	+	2964	2	ISM	ENSMUSG00000021044.16	ENSMUST00000223538.2	1869	8	36384	6	36384	0	intron_retention	FALSE	canonical	3	70	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88423449	88428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_88423705_88425779
ES.8191.2	chr12	+	1995	10	NIC	ENSMUSG00000021044.16	novel	2158	11	NA	NA	-42	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	25.1120943760296	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327281	88428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327366_88335104_88335251_88338464_88338549_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.3	chr12	+	2038	10	NIC	ENSMUSG00000021044.16	novel	2158	11	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	24.0046291831851	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327283	88428488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.4	chr12	+	904	2	ISM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-9	92532	-9	-2203	5prime_fragment	FALSE	canonical	3	29	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTTTGTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	88327314	88335957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_88327366_88335104
ES.8191.5	chr12	+	2171	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	-9	-4	-9	-1	multi-exon	FALSE	canonical	3	29	junction_1	14.3544418212622	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTCCTTCTCAATCAT	NA	False	NA	14	True	AATAAA	-27	NA	88327314	88428493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.6	chr12	+	2373	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	-103	-17	-9	13	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTGTCTCCATTTAGA	NA	False	NA	28	True	AATAAA	-41	NA	88327314	88428507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.7	chr12	+	3056	11	NNC	ENSMUSG00000021044.16	novel	2158	11	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	24.4098340838278	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGTTCCTTCTCAATC	NA	False	NA	12	True	AATAAA	-25	NA	88327317	88428491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_88327366_88335104_88336141_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ES.8191.8	chr12	+	1949	10	NIC	ENSMUSG00000021044.16	novel	2158	11	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	26.4579797293373	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGGGACTGTTCCTTCT	NA	False	NA	7	True	AATAAA	-20	NA	88327331	88428486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88425779_88425974_88427784
ES.8191.9	chr12	+	4498	8	NNC	ENSMUSG00000021044.16	novel	2253	11	NA	NA	21	-9758	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.0332277484924	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACCTGTAATTGTGCTA	NA	False	NA	NA	False	NA	NA	NA	88327344	88418730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88415310
ES.8192.1	chr12	-	177	1	Intergenic	novelGene_6771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGAGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	88474157	88473980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_88474000_88474200
ES.8193.1	chr12	+	156	1	Intergenic	novelGene_6772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	90731418	90731574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_90731400_90731600
ES.8194.1	chr12	+	3676	2	Genic_Genomic	ENSMUSG00000114086.2	novel	862	1	NA	NA	-4693	1143	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTCCCAAAGGCAAAG	NA	False	NA	NA	False	AATGAA	-34	NA	91104867	91111565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_91106518_91109539
ES.8195.1	chr12	+	156	1	Intergenic	novelGene_6774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	91127126	91127282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91127100_91127300
ES.8196.1	chr12	+	4739	1	Intergenic	novelGene_6776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTCGTTGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	91144971	91149710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91145000_91149700
ES.8196.2	chr12	+	346	1	Intergenic	novelGene_6775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACCCTAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	91144971	91145317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91145000_91145300
ES.8197.1	chr12	+	407	1	Intergenic	novelGene_6777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGAGCACTT	NA	False	NA	NA	False	NA	NA	NA	91182167	91182574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91182200_91182600
ES.8197.2	chr12	+	7181	3	Antisense	novelGene_ENSMUSG00000061533.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGAGATGCTCAAGATT	NA	False	NA	NA	False	NA	NA	NA	91182224	91192813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91183531_91183792_91188127_91191272
ES.8198.1	chr12	+	1545	1	Intergenic	novelGene_6780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91295451	91296996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91295500_91297000
ES.8199.1	chr12	-	3594	15	ISM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	88147	-115	-29329	115	3prime_fragment	TRUE	canonical	3	41	junction_10	9.91520168679366	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGTGTAGAAGAAATGA	3021	False	NA	NA	False	ATTAAA	-14	NA	91263036	90965150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976
ES.8199.11	chr12	-	4838	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	14.8162073419617	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6172	False	NA	-5	True	AATAAA	-19	NA	91351163	90965265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315472_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.12	chr12	-	2945	11	NIC	ENSMUSG00000061533.17	novel	3045	13	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.8736005796635	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	NA	False	NA	-5	True	AATAAA	-19	NA	91233695	90965265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509
ES.8199.13	chr12	-	4032	25	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_24	17.7736051960953	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6148	False	NA	-5	True	AATAAA	-19	NA	91351187	90965265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351135
ES.8199.14	chr12	-	4015	24	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.8523508673509	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6132	False	NA	-5	True	AATAAA	-19	NA	91351203	90965265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91038059_91038150_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314414_91315523_91315651_91336835_91336971_91348421_91348563_91351007
ES.8199.15	chr12	-	4787	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	14.6257854489938	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6148	False	NA	-7	True	AATAAA	-17	NA	91351187	90965267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333257_91336835_91336971_91348421_91348563_91351007
ES.8199.16	chr12	-	4080	24	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	17.6355672580776	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6139	False	NA	-7	True	AATAAA	-17	NA	91351196	90965267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.18	chr12	-	4683	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	14.4877327418751	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6146	False	NA	-7	True	AATAAA	-17	NA	91351189	90965267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351135
ES.8199.19	chr12	-	3930	23	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-25	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	17.6188408733097	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6127	False	NA	-7	True	AATAAA	-17	NA	91351208	90965267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91336835_91336971_91348421_91348563_91351007
ES.8199.2	chr12	-	4582	24	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-17	7	combination_of_known_splicesites	FALSE	canonical	2	8	junction_21	13.9047529647043	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCGTCTGTTAAAATAC	6135	False	NA	2	True	AATAAA	-26	NA	91351200	90965258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91336835_91336971_91348421_91348563_91351007
ES.8199.20	chr12	-	4859	27	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-25	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.2299577878487	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGAATGATGCGTCTG	6127	False	NA	-7	True	AATAAA	-17	NA	91351208	90965267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90973207_90973237_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.21	chr12	-	3917	20	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-290	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	16.2654571701169	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGAATGATGCGTCT	NA	False	NA	-8	True	AATAAA	-16	NA	91306145	90965268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91306088
ES.8199.23	chr12	-	4929	27	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	18.1043981056878	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATTGAATGATGCGTC	6136	False	NA	-9	True	AATAAA	-15	NA	91351199	90965269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91266823_91266934_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.24	chr12	-	4769	26	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	14	-5	combination_of_known_junctions	FALSE	canonical	3	6	junction_23	13.6900547844046	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	6166	False	NA	-10	True	AATAAA	-14	NA	91351169	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336854_91336971_91348421_91348563_91351007
ES.8199.25	chr12	-	3278	12	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-22708	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	18.9488218958243	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	9642	False	NA	-10	True	AATAAA	-14	NA	91256415	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91050427_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262
ES.8199.26	chr12	-	4684	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-47	-5	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	13.8601647416857	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	6105	False	NA	-10	True	AATAAA	-14	NA	91351230	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.28	chr12	-	4778	27	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	32	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	17.7263885794881	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	6240	False	NA	-10	True	AATAAA	-14	NA	91351095	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90976336_90976401_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.29	chr12	-	3990	24	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	20	-5	combination_of_known_splicesites	FALSE	canonical	1	1	junction_23	18.199275001659	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	6172	False	NA	-10	True	AATAAA	-14	NA	91351163	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91351007
ES.8199.3	chr12	-	4315	22	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	7	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	15.5757238869715	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCGTCTGTTAAAATAC	6159	False	NA	2	True	AATAAA	-26	NA	91351176	90965258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91336835_91336971_91348421_91348563_91351007
ES.8199.30	chr12	-	4055	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	21	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	17.1374650498063	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGAATGATGCGT	6229	False	NA	-10	True	AATAAA	-14	NA	91351106	90965270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336854_91336971_91348421_91348563_91351007
ES.8199.31	chr12	-	4784	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	20.9002966486124	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACATTGAATGATGCG	6172	False	NA	-11	True	AATAAA	-13	NA	91351163	90965271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91038059_91038150_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.32	chr12	-	3887	26	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-22	34	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	14.4877327418751	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGCAGAGAAAGTGATC	6130	False	NA	NA	False	TTTAAA	-10	NA	91351205	90966079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351135
ES.8199.33	chr12	-	3939	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	50	818	0	30	multi-exon	FALSE	canonical	3	41	junction_10	9.02405673741029	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATACTGGCAGAGAAAGT	6202	False	NA	NA	False	TTTAAA	-6	NA	91351133	90966083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.34	chr12	-	3908	26	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-19	-1	combination_of_known_junctions	FALSE	canonical	3	6	junction_23	13.6900547844046	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGCAGTATATAACTCA	6183	False	NA	NA	False	AATAAA	-26	NA	91351152	90966114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336854_91336971_91348421_91348563_91351007
ES.8199.35	chr12	-	3303	18	NNC	ENSMUSG00000061533.17	novel	1750	14	NA	NA	17850	91148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.6434209286316	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTTAATTGTTGGGGC	NA	False	NA	NA	False	ATTAAA	-15	NA	91333277	91089322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91089809_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116
ES.8199.36	chr12	-	1037	1	Intergenic	novelGene_6773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTTTTCACAAATTG	NA	False	NA	NA	False	NA	NA	NA	91116120	91115083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91115100_91116100
ES.8199.37	chr12	-	5988	18	ISM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	15	232566	15	-17361	5prime_fragment	FALSE	canonical	3	41	junction_2	9.32570952429293	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	6167	False	NA	NA	False	NA	NA	NA	91351168	91197831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.38	chr12	-	2841	1	Intergenic	novelGene_6778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5935	False	NA	NA	False	NA	NA	NA	91209835	91206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91207000_91209800
ES.8199.39	chr12	-	1969	13	NNC	ENSMUSG00000061533.17	novel	1750	14	NA	NA	7	15722	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.5884858917792	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAATAATAATAGCAA	6159	False	NA	NA	False	AATAAA	-21	NA	91351176	91240444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91240997_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91336835_91336971_91348421_91348563_91351007
ES.8199.40	chr12	-	2054	1	Intergenic	novelGene_6779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTCCTTGTGACTACT	NA	False	NA	NA	False	NA	NA	NA	91276100	91274046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91274000_91276100
ES.8199.41	chr12	-	2559	2	NNC	ENSMUSG00000061533.17	novel	3117	4	NA	NA	20571	1205	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTACATTTGAGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	91285284	91282659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91283672_91283737
ES.8199.42	chr12	-	1562	11	NNC	ENSMUSG00000061533.17	novel	1806	8	NA	NA	0	-4853	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	23.5942789675803	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTGTGTCTGGCTTTG	6202	False	NA	NA	False	ATTAAA	-16	NA	91351133	91288717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91289123_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336854_91336971_91348421_91348563_91351007
ES.8199.5	chr12	-	4836	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	-22	-7	-22	7	multi-exon	FALSE	canonical	3	41	junction_10	9.02405673741029	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCGTCTGTTAAAATAC	6130	False	NA	2	True	AATAAA	-26	NA	91351205	90965258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.6	chr12	-	4730	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-5	5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_21	14.1507263260779	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGCGTCTGTTAAAAT	6147	False	NA	0	True	AATAAA	-24	NA	91351188	90965260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.8199.7	chr12	-	3677	16	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-29313	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	24.8908729367926	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGATGCGTCTGTTAAA	3037	False	NA	-2	True	AATAAA	-22	NA	91263020	90965262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90976336_90976401_90986065_90986180_90989173_90989252_91029768_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976
ES.8199.8	chr12	-	3881	19	NNC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	70	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	16.4764141190437	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGATGCGTCTGTTAAA	NA	False	NA	-2	True	AATAAA	-22	NA	91305785	90965262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305678
ES.8199.9	chr12	-	4162	25	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	-4	2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	13.6808234604338	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGATGCGTCTGTTAA	6148	False	NA	-3	True	AATAAA	-21	NA	91351187	90965263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ES.82.1	chr1	+	229	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTACTTCTTACT	NA	False	NA	24	True	AATAGA	-10	NA	10055081	10055310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10055100_10055300
ES.820.1	chr1	+	4033	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCATAAGAATAAGAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77414018	77418051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_77414000_77418100
ES.820.2	chr1	+	1858	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	77414018	77415876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_77414000_77415900
ES.820.3	chr1	+	1883	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	77417460	77419343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_77417500_77419300
ES.8200.1	chr12	-	5488	6	Antisense	novelGene_ENSMUSG00000020963.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTATTGTTTGCATGT	NA	False	NA	NA	False	NA	NA	NA	91513338	91502145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_91502485_91502787_91505723_91509089_91510993_91511083_91511266_91512834_91512924_91513298
ES.8200.2	chr12	-	1164	1	Intergenic	novelGene_6781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCCTTAGTCATGGCG	NA	False	NA	NA	False	NA	NA	NA	91510224	91509060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91509100_91510200
ES.8201.11	chr12	+	3976	9	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCAACAAAACCGATCC	NA	False	NA	NA	False	NA	NA	NA	91523835	91556488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529769_91534305_91534633_91534908_91535044_91536532_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8201.12	chr12	+	3378	9	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	91524315	91556374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535044_91536532_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8201.13	chr12	+	3368	9	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	91524315	91556374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535038_91536532_91536607_91539337_91539408_91542357_91542566_91553473_91553576_91556308
ES.8201.15	chr12	+	2400	10	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	91526165	91556475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535044_91536532_91536613_91539339_91539408_91542357_91542566_91543034_91543806_91553473_91553576_91556308
ES.8201.16	chr12	+	4363	2	Antisense	novelGene_ENSMUSG00000020962.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCAACAAAACCGATCC	NA	False	NA	NA	False	NA	NA	NA	91549392	91556488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91553576_91556308
ES.8201.17	chr12	+	146	1	Intergenic	novelGene_6783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAACAAACAAAAAA	NA	False	NA	NA	False	AATGAA	-18	NA	91555282	91555428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91555300_91555400
ES.8201.3	chr12	+	996	1	Antisense	novelGene_ENSMUSG00000020962.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTATTACCAGTAATGGA	NA	False	NA	NA	False	AAAAAG	-42	NA	91523833	91524829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91523800_91524800
ES.8201.4	chr12	+	3974	9	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCAACAAAACCGATCC	NA	False	NA	NA	False	NA	NA	NA	91523833	91556488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535044_91536532_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8201.5	chr12	+	4055	10	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTCAACAAAACCGATCC	NA	False	NA	NA	False	NA	NA	NA	91523833	91556488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535044_91536532_91536613_91539339_91539408_91542357_91542566_91552148_91552230_91553473_91553576_91556308
ES.8201.7	chr12	+	3959	9	Antisense	novelGene_ENSMUSG00000080365.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	91523833	91556475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91526626_91529682_91529772_91534312_91534633_91534908_91535049_91536539_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8201.8	chr12	+	1254	1	Antisense	novelGene_ENSMUSG00000020962.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTCAAC	NA	False	NA	NA	False	TATAAA	-32	NA	91523833	91525087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91523800_91525100
ES.8202.1	chr12	-	6171	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	59	-166	59	166	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGATCGAGAGCCC	1304	False	NA	NA	False	AATAAA	-18	NA	91556724	91521869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8202.10	chr12	-	4967	9	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	1266	-645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	467.7433691406	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTGCTTGCTTTGCT	2881	False	NA	NA	False	ATTAAA	-20	NA	91555147	91522680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536609_91539339_91539408_91542357_91542566_91553473_91553576_91555120
ES.8202.11	chr12	-	5446	9	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	-33	-645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	353.401241508855	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTGCTTGCTTTGCT	1212	False	NA	NA	False	ATTAAA	-20	NA	91556816	91522680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539402_91542357_91542566_91553473_91553576_91556308
ES.8202.12	chr12	-	5905	2	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	25132	654	24762	-654	3prime_fragment	FALSE	canonical	3	1109	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTAATGTTGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	91531651	91522689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91526626_91529682
ES.8202.14	chr12	-	4861	8	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	13900	-654	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	468.437960085409	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTAATGTTGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	91542513	91522689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91540072_91540153_91542357
ES.8202.15	chr12	-	5131	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	-30	963	-30	-963	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTTAGATCAGTTCAG	1215	False	NA	NA	False	AATAAA	-20	NA	91556813	91522998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8202.16	chr12	-	3394	7	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	14705	-1342	13857	1342	3prime_fragment	FALSE	canonical	3	1018	junction_5	45.1319054427008	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCACTTGGAGAGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	91542556	91524119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357
ES.8202.17	chr12	-	3239	10	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	-30	453	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	428.29137998895	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAGCTATATTGTGCTT	1215	False	NA	NA	False	GATAAA	-20	NA	91556813	91525008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91538892_91539011_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8202.18	chr12	-	2266	9	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	1290	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	357.402412379939	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCTTGTGTTTACTA	2905	False	NA	NA	False	ATTAAA	-16	NA	91555123	91525521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91554960
ES.8202.19	chr12	-	831	4	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	22328	767	21480	-767	3prime_fragment	FALSE	canonical	3	1040	junction_2	41.4487635521254	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTGTCTATATTTG	NA	False	NA	NA	False	AATACA	-27	NA	91534933	91526228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910
ES.8202.2	chr12	-	5375	7	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	13949	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	514.014077844394	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTATTTTGCAGTTTA	NA	False	NA	1	True	AATAAA	-24	NA	91542464	91522034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534914_91535045_91536536_91536613_91539347_91539408_91542357
ES.8202.20	chr12	-	5178	1	Intergenic	novelGene_6782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAGAACAGAACAGA	8155	False	NA	NA	False	NA	NA	NA	91549873	91544695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91544700_91549900
ES.8202.21	chr12	-	9084	3	NNC	ENSMUSG00000020962.15	novel	282	2	NA	NA	50	8698	at_least_one_novel_splicesite	TRUE	non_canonical	1	4	junction_1	471	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAGAAAAGAACAGA	-2	True	NA	NA	False	NA	NA	NA	91556733	91544700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91545415_91545630_91553576_91556308
ES.8202.3	chr12	-	6931	7	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	15478	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	519.644108982292	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	NA	False	NA	0	True	AATAAA	-23	NA	91540935	91522035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91538892_91539017_91539339
ES.8202.4	chr12	-	6094	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	-31	1	-31	-1	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTATTTTGCAGTT	1214	False	NA	-1	True	AATAAA	-22	NA	91556814	91522036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8202.7	chr12	-	4632	3	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	22369	149	21999	-149	3prime_fragment	FALSE	canonical	3	1040	junction_2	34.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGATTTTATAGTTAA	NA	False	NA	NA	False	ATTAAA	-12	NA	91534414	91522184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91526626_91529682_91529773_91534313
ES.8202.8	chr12	-	5462	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	-42	644	-42	-644	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGCTTGCTTTGCTT	1203	False	NA	NA	False	ATTAAA	-21	NA	91556825	91522679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ES.8202.9	chr12	-	4154	3	NNC	ENSMUSG00000020962.15	novel	6064	9	NA	NA	26642	-645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTGCTTGCTTTGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	91529771	91522680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91526626_91528573_91528694_91529682
ES.8203.1	chr12	+	176	1	Intergenic	novelGene_6784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAACCATGCC	2495	False	NA	NA	False	NA	NA	NA	91592741	91592917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_91592700_91592900
ES.8204.1	chr12	-	161	1	Intergenic	novelGene_6785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGTTATTAGCTA	NA	False	NA	NA	False	NA	NA	NA	91597235	91597074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91597100_91597200
ES.8205.1	chr12	-	179	1	ISM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	153248	1	80786	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCAGTGTTTAATGAA	NA	False	NA	-2	True	AATAAA	-17	NA	91599962	91599783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91599800_91600000
ES.8206.1	chr12	+	785	1	Antisense	novelGene_ENSMUSG00000020961.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91601618	91602403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_91601600_91602400
ES.8207.1	chr12	-	5913	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27829	-3117	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGACTATCCTGTGCT	NA	False	NA	NA	False	ATTAAA	-26	NA	91652919	91602899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
ES.8207.10	chr12	-	3939	4	NIC	ENSMUSG00000020961.16	novel	1544	4	NA	NA	-24	2812	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTGTTTGCTGAGTCC	119	False	NA	NA	False	NA	NA	NA	91745935	91699015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91702243_91707244_91707521_91710379_91710653_91745772
ES.8207.11	chr12	-	1105	4	NIC	ENSMUSG00000020961.16	novel	1544	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATTTTGTGGTAATTTG	143	False	NA	NA	False	NA	NA	NA	91745911	91701825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91702243_91707244_91707521_91710379_91710653_91745772
ES.8207.2	chr12	-	6619	7	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	-22	-3128	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.1753697428268	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTCTGACTCTGAGAC	121	False	NA	NA	False	ATTAAA	-15	NA	91745933	91602910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91745772
ES.8207.3	chr12	-	3731	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27839	3245	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGACTCGAGCTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	91652909	91605071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
ES.8207.4	chr12	-	3082	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27831	2588	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCAGAGGACAGCTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	91652917	91605728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
ES.8207.5	chr12	-	2728	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27856	2259	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTCTCTGGGCCTGCT	NA	False	NA	1	True	TATAAA	-20	NA	91652892	91606057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
ES.8207.6	chr12	-	3798	6	NNC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27892	2259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.3331782937351	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTCTCTGGGCCTGCT	NA	False	NA	1	True	TATAAA	-20	NA	91652856	91606057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91606580_91608494_91608698_91614005_91615845_91629759_91629985_91650935_91651817_91652728
ES.8207.7	chr12	-	3472	7	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	-22	2259	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	11.1753697428268	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTCTCTGGGCCTGCT	121	False	NA	1	True	TATAAA	-20	NA	91745933	91606057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91745772
ES.8207.8	chr12	-	3554	1	Intergenic	novelGene_6786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGACAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	91613997	91610443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91610400_91614000
ES.8207.9	chr12	-	5207	2	FSM	ENSMUSG00000090722.9	ENSMUST00000167777.3	2624	2	-10	-2573	-10	2573	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTGGGAGGCATGAGA	NA	False	NA	NA	False	TTTAAA	-3	NA	91652897	91646778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91651817_91652728
ES.8208.1	chr12	-	6348	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-21	-27	-21	27	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCATGTGCAGACTTT	NA	False	NA	3	True	AATAAA	-45	NA	91815952	91772789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.10	chr12	-	6123	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	False	NA	-25	True	AATAAA	-17	NA	91815902	91772817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798458_91808399_91808629_91809999_91810038_91815732
ES.8208.11	chr12	-	7510	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	0	-1	intron_retention	FALSE	canonical	3	285	junction_16	39.2026484491719	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	False	NA	-25	True	AATAAA	-17	NA	91815913	91772817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.13	chr12	-	6084	22	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4698707571188	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	NA	False	NA	-26	True	AATAAA	-16	NA	91815921	91772818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91773212_91773415_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.14	chr12	-	6110	6	ISM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	31834	2	925	-2	intron_retention	FALSE	canonical	3	350	junction_1	38.7329317248256	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	4274	False	NA	-26	True	AATAAA	-16	NA	91784097	91772818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539
ES.8208.15	chr12	-	6142	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	117.592469655449	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	NA	False	NA	-26	True	AATAAA	-16	NA	91815944	91772818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808613_91809999_91810038_91815732
ES.8208.17	chr12	-	6163	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.8353049842348	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTCTGGGCGTGTGCC	NA	False	NA	-26	True	AATAAA	-16	NA	91815925	91772818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.19	chr12	-	6205	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	85.7873102730125	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTCTGGGCGTGTGC	NA	False	NA	-27	True	AATAAA	-15	NA	91815914	91772819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.2	chr12	-	5402	22	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	13	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4698707571188	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGTGTGCCACATTCAA	NA	False	NA	-18	True	AATAAA	-24	NA	91815890	91772810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91774023_91774885_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.20	chr12	-	5597	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-8	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTCATCAGTTATTGC	NA	False	NA	NA	False	NA	NA	NA	91815939	91773374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.21	chr12	-	5768	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-26	558	-26	20	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTCATCAGTTATTGC	NA	False	NA	NA	False	NA	NA	NA	91815957	91773374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.22	chr12	-	3666	5	NNC	ENSMUSG00000020964.15	novel	4287	20	NA	NA	0	20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.013461073845	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTCATCAGTTATTGC	NA	False	NA	NA	False	NA	NA	NA	91815913	91773374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776484_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.24	chr12	-	4932	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	1	1367	1	-789	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGATGTCAGTGACAT	NA	False	NA	NA	False	AATAAA	-13	NA	91815930	91774183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.25	chr12	-	4494	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-8	1814	-8	786	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCACTGGCTTCTGTGG	NA	False	NA	NA	False	AATAAA	-26	NA	91815939	91774630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.26	chr12	-	4334	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-4	783	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATGCCACTGGCTTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	91815935	91774633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.28	chr12	-	4036	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-30	2294	-30	306	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	NA	False	NA	-8	True	NA	NA	NA	91815961	91775110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.29	chr12	-	3858	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-5	306	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	NA	False	NA	-8	True	NA	NA	NA	91815936	91775110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.3	chr12	-	6159	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-6	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGTGTGCCACATTCAA	NA	False	NA	-18	True	AATAAA	-24	NA	91815937	91772810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.30	chr12	-	1888	5	NNC	ENSMUSG00000020964.15	novel	4287	20	NA	NA	30	304	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	195.013461073845	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGTACATTTGTGTG	NA	False	NA	-10	True	NA	NA	NA	91815873	91775112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776484_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.32	chr12	-	3986	21	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-19	303	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	88.5750529212374	448	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGTACATTTGTGT	NA	False	NA	-11	True	NA	NA	NA	91815950	91775113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791713_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.33	chr12	-	3917	22	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	8	302	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.4698707571188	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGTGTACATTTGTG	NA	False	NA	-12	True	NA	NA	NA	91815895	91775114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91775621_91775669_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.34	chr12	-	3815	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	3	302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	88.9223882705254	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGTGTACATTTGTG	NA	False	NA	-12	True	NA	NA	NA	91815900	91775114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91808399_91808629_91809999_91810038_91815732
ES.8208.4	chr12	-	6078	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	116.790363128417	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGTGTGCCACATTCAA	NA	False	NA	-18	True	AATAAA	-24	NA	91815923	91772810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815799
ES.8208.41	chr12	-	7347	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	2	226	intron_retention	FALSE	canonical	3	285	junction_16	39.6807900243041	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGAGTTTGAATGTTGG	NA	False	NA	3	True	AATGAA	-30	NA	91815929	91775190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.42	chr12	-	3833	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	1	216	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	89.1816907286402	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGAAAGCTTTGAGTT	NA	False	NA	-7	True	AATGAA	-20	NA	91815902	91775200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808613_91815732
ES.8208.43	chr12	-	3158	16	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	333	212	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	98.449626149056	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTTTGGAAAGCTTTG	6000	False	NA	-11	True	AATGAA	-16	NA	91798373	91775204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342
ES.8208.44	chr12	-	3847	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	1	210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	85.7873102730125	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTTTGGAAAGCTT	NA	False	NA	-13	True	AATGAA	-14	NA	91815930	91775206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781734_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.45	chr12	-	3887	21	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-19	210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	88.603950250539	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTTTGGAAAGCTT	NA	False	NA	-13	True	AATGAA	-14	NA	91815950	91775206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776805_91778669_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.46	chr12	-	3709	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	-5	2596	-5	4	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGCTTCAGTAAGAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	91815936	91775412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.47	chr12	-	3565	20	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-14	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	88.9223882705254	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGCTTCAGTAAGAGG	NA	False	NA	NA	False	ATTAAA	-17	NA	91815945	91775412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.48	chr12	-	3910	21	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	88.1742592824006	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCCTGCTTCAGTAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	91815914	91775415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91782140_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.49	chr12	-	3654	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	89.5851936717656	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCCTGCTTCAGTAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	91815922	91775415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91815732
ES.8208.5	chr12	-	6249	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	89.5851936717656	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCGTGTGCCACATTCA	NA	False	NA	-19	True	AATAAA	-23	NA	91815913	91772811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91815732
ES.8208.52	chr12	-	3515	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	0	2785	0	-185	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATGGAGGATGGGTTA	NA	False	NA	NA	False	ACTAAA	-15	NA	91815931	91775601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.53	chr12	-	2237	18	NNC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	30	1960	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	93.935595988803	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACGTTTTCCTGATCTT	NA	False	NA	NA	False	AATAAA	-14	NA	91815873	91780317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798464_91808411_91808629_91809999_91810038_91815732
ES.8208.54	chr12	-	2046	16	ISM	ENSMUSG00000020964.15	ENSMUST00000166691.8	4287	20	16	6780	15	81	5prime_fragment	FALSE	canonical	3	285	junction_12	34.1866770670811	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGATCTGTCTTTGCTTTA	NA	False	NA	NA	False	GATAAA	-15	NA	91815888	91782196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.55	chr12	-	1395	12	NNC	ENSMUSG00000020964.15	novel	1402	12	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.470886099332	375	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCCTGTCTTCATGT	NA	False	NA	NA	False	AATAAA	-18	NA	91815902	91786757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797622_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ES.8208.8	chr12	-	6061	20	NIC	ENSMUSG00000020964.15	novel	6300	21	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	88.0981572937797	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGGCGTGTGCCAC	NA	False	NA	-24	True	AATAAA	-18	NA	91815860	91772816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91808411_91808629_91809999_91810038_91815732
ES.8209.1	chr12	-	177	1	Intergenic	novelGene_6787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	NA	False	NA	NA	False	NA	NA	NA	91925946	91925769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_91925800_91925900
ES.821.1	chr1	+	1758	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGACAAGAGGAGGAAATGA	NA	False	NA	NA	False	NA	NA	NA	77429628	77431386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_77429600_77431400
ES.8210.1	chr12	+	156	1	Intergenic	novelGene_6788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATATATT	NA	False	NA	NA	False	NA	NA	NA	92215170	92215326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_92215200_92215300
ES.8211.1	chr12	-	102	1	Intergenic	novelGene_6789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTATGCAGCAACTAGG	NA	False	NA	31	True	NA	NA	NA	92428992	92428890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_92428900_92429000
ES.8212.1	chr12	-	3818	1	Intergenic	novelGene_6790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	93509221	93505403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_93505400_93509200
ES.8213.1	chr12	-	177	1	Intergenic	novelGene_6791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	94244093	94243916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_94243900_94244100
ES.8214.1	chr12	-	3398	1	Intergenic	novelGene_6792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTGCATGTCTTTC	NA	False	NA	NA	False	AATAAA	-33	NA	95381958	95378560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_95378600_95382000
ES.8215.1	chr12	+	3613	3	NNC	ENSMUSG00000047414.7	novel	7099	2	NA	NA	-65	666	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATTGAATGCAATTATT	NA	False	NA	NA	False	AATAAA	-15	NA	95658934	95748547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_95659032_95659140_95659390_95745280
ES.8215.10	chr12	+	4744	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	117	-1638	117	1638	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTAGGTATACAATG	NA	False	NA	NA	False	AATAAA	-20	NA	95662247	95749519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.2	chr12	+	4511	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-213	-1075	-213	1075	multi-exon	FALSE	canonical	3	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTCTGTGAAGGCGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	95661917	95748956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.3	chr12	+	3442	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-193	-26	-193	26	multi-exon	FALSE	canonical	3	13	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGGGTTGTACAATGAGA	NA	False	NA	NA	False	ATTAAA	-24	NA	95661937	95747907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.4	chr12	+	7524	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-193	-4108	-193	0	multi-exon	FALSE	canonical	3	13	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTTTATCTGAGT	NA	False	NA	NA	False	AGTAAA	-20	NA	95661937	95751989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.5	chr12	+	4353	3	NNC	ENSMUSG00000047414.7	novel	3223	2	NA	NA	-163	1070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAATGATTCTGTGAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	95661967	95748951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_95662753_95745280_95745559_95745661
ES.8215.6	chr12	+	5459	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-161	-2075	-161	-2033	multi-exon	FALSE	canonical	3	13	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATAATGGTACTTTG	NA	False	NA	NA	False	NA	NA	NA	95661969	95749956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.7	chr12	+	3906	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-24	-659	-24	659	multi-exon	FALSE	canonical	3	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAATTATATTGAATGC	NA	False	NA	NA	False	AATAAA	-8	NA	95662106	95748540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.8	chr12	+	5057	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	-20	-1814	-20	1814	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAACATAGTTATGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	95662110	95749695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_95662753_95745280
ES.8215.9	chr12	+	6884	3	NNC	ENSMUSG00000047414.7	novel	3223	2	NA	NA	2	-6	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCTATTGTGTTTAT	NA	False	NA	NA	False	AGTAAA	-14	NA	95662132	95751983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_95662177_95662615_95662753_95745280
ES.8216.1	chr12	-	254	1	Intergenic	novelGene_6793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACATGTAATTCAACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	96224801	96224547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_96224500_96224800
ES.8217.1	chr12	-	237	1	Intergenic	novelGene_6794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATCTTTTTATGGGGA	NA	False	NA	NA	False	AATAAA	-13	NA	96686717	96686480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_96686500_96686700
ES.8218.1	chr12	-	433	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	362	-159	362	159	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGTTATGTTGAAACA	NA	False	NA	NA	False	NA	NA	NA	96889470	96889037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_96889000_96889500
ES.8219.1	chr12	+	1618	1	Intergenic	novelGene_6795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAATCAATTTCAGTCA	NA	False	NA	NA	False	AATAAA	-32	NA	98214006	98215624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_98214000_98215600
ES.822.1	chr1	+	6481	1	Antisense	novelGene_ENSMUSG00000026235.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGTTAGGAGTGCAG	NA	False	NA	NA	False	AATAAA	-1	NA	77485238	77491719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_77485200_77491700
ES.8220.1	chr12	-	3948	18	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-5	598	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.28033229329901	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCATGCTGAACGGGGT	NA	False	NA	NA	False	NA	NA	NA	98225611	98167954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98168156_98168530_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ES.8220.11	chr12	-	3459	15	NIC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	1842	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	9.49758293633981	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATACAAATCTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	98223200	98168562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98218268_98218409_98220423_98220538_98222885_98222950_98223130
ES.8220.12	chr12	-	2563	18	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-240	485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	11.1724450954912	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTTGTTTGTACTTT	NA	False	NA	NA	False	AATAAA	-45	NA	98225282	98169569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98224232_98224278_98225254
ES.8220.13	chr12	-	2608	15	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-221	-1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	12.06445276041	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTACAGGAGTCTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	98225263	98175032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212508_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98224232
ES.8220.14	chr12	-	3036	1	Genic_Genomic	ENSMUSG00000021003.11	novel	NA	NA	NA	NA	-3095	2502	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGCACCTGGCAGGG	NA	False	NA	NA	False	AAAAAG	-5	NA	98206362	98203326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_98203300_98206400
ES.8220.2	chr12	-	4615	18	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-207	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	11.3057538096384	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGAATTTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	98225249	98168552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98223949_98224041_98224232
ES.8220.3	chr12	-	3808	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	24	0	24	0	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGAATTTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	98225694	98168552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ES.8220.4	chr12	-	3633	17	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	173	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	9.35998798076151	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCTTTGAGAATTTGCA	NA	False	NA	NA	False	NA	NA	NA	98225384	98168556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225254
ES.8220.5	chr12	-	4569	17	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	256	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	10.6505208205984	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTTGAGAATTTGC	NA	False	NA	NA	False	NA	NA	NA	98225301	98168557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200655_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98224232
ES.8220.7	chr12	-	5485	16	NIC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	22	junction_3	6.35050304219192	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCTTTGAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	98225610	98168558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ES.8220.8	chr12	-	3613	17	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-254	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.5839328382031	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCTTTGAGAATTTG	NA	False	NA	NA	False	NA	NA	NA	98225296	98168558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179170_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225254
ES.8220.9	chr12	-	3702	16	NNC	ENSMUSG00000021003.11	novel	3832	17	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.18114008897225	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAATCTTTGAGAATT	NA	False	NA	NA	False	NA	NA	NA	98225610	98168560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209035_98218246_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ES.8221.1	chr12	+	152	1	Intergenic	novelGene_6796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	98560908	98561060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_98560900_98561100
ES.8222.1	chr12	-	297	1	Intergenic	novelGene_6797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATCTCCATCATTG	NA	False	NA	NA	False	NA	NA	NA	98587323	98587026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_98587000_98587300
ES.8222.2	chr12	-	179	1	Intergenic	novelGene_6798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAGAAATGAC	NA	False	NA	NA	False	NA	NA	NA	98587321	98587142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_98587100_98587300
ES.8223.1	chr12	+	2366	12	NNC	ENSMUSG00000021007.15	novel	2052	12	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.1372080942449	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACACCACATATTTAT	NA	False	NA	11	True	NA	NA	NA	98594408	98636068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98594594_98598221_98598297_98603824_98603873_98612278_98612688_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.10	chr12	+	1873	11	ISM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	3804	3	-1049	0	3prime_fragment	FALSE	canonical	3	39	junction_1	12.6491106406735	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	False	NA	14	True	NA	NA	NA	98598219	98636071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.11	chr12	+	3861	1	Antisense	novelGene_ENSMUSG00000021009.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGGAACAAAAGAGCCCT	6833	False	NA	NA	False	NA	NA	NA	98657599	98661460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_98657600_98661500
ES.8223.12	chr12	+	2665	2	Antisense	novelGene_ENSMUSG00000021009.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGGAACAAAAGAGCCCT	7431	False	NA	NA	False	NA	NA	NA	98658197	98661460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_98659221_98659818
ES.8223.3	chr12	+	2228	1	FSM	ENSMUSG00000021007.15	ENSMUST00000222195.2	2193	1	-17	-18	-7	18	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCATATCAAGAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	98594408	98596636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98594400_98596600
ES.8223.4	chr12	+	1960	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	-47	0	-7	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	False	NA	14	True	NA	NA	NA	98594408	98636071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.5	chr12	+	2054	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	1	-3	1	3	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTTATTATTGCTCT	NA	False	NA	20	True	NA	NA	NA	98594416	98636077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.6	chr12	+	4411	11	NIC	ENSMUSG00000021007.15	novel	2052	12	NA	NA	2	6	intron_retention	FALSE	canonical	3	39	junction_2	12.6948808580467	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATTATTGCTCTCAT	NA	False	NA	23	True	NA	NA	NA	98594417	98636080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.7	chr12	+	1945	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	2	105	2	-102	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTACTTTTCTT	NA	False	NA	11	True	AATAAA	-18	NA	98594417	98635969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8223.8	chr12	+	2065	13	NNC	ENSMUSG00000021007.15	novel	2052	12	NA	NA	5	25386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	20.7759208914765	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGGAACAAAAGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	98594430	98661460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360_98636064_98661421
ES.8223.9	chr12	+	2347	13	NNC	ENSMUSG00000021007.15	novel	2052	12	NA	NA	11	-102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	25.5190560605643	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTACTTTTCTT	NA	False	NA	11	True	AATAAA	-18	NA	98594436	98635969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98612278_98612700_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ES.8224.1	chr12	+	4804	2	Antisense	novelGene_ENSMUSG00000021009.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGGTAAAATAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	98663800	98668802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_98666892_98667089
ES.8225.1	chr12	+	175	1	Intergenic	novelGene_6799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	98670893	98671068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_98670900_98671100
ES.8226.1	chr12	-	10578	1	FSM	ENSMUSG00000112990.2	ENSMUST00000221845.2	3544	1	-1644	-5390	-1644	5390	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTCCTCCAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	98620384	98609806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98609800_98620400
ES.8227.1	chr12	-	5715	19	FSM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	-18	-1	-18	0	multi-exon	FALSE	canonical	3	8	junction_18	9.45636502606434	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98700922	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
ES.8227.10	chr12	-	3068	7	NNC	ENSMUSG00000021009.16	novel	3777	17	NA	NA	-4691	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	13.9692121785335	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCGTGTTCCTGTTGC	NA	False	NA	-1	True	ATTAAA	-14	NA	98654700	98643001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98644938_98645534_98645696_98646215_98646446_98646619_98646749_98648777_98649000_98649736_98649875_98654448
ES.8227.11	chr12	-	5349	18	NIC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-151	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	11.0020444781396	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTTCGTGTTCCTGTTG	NA	False	NA	-2	True	ATTAAA	-13	NA	98703815	98643002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98703623
ES.8227.14	chr12	-	5670	18	NIC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-199	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	10.8993507949265	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCATGTTCGTGTTCCTG	NA	False	NA	-5	True	ATTAAA	-10	NA	98703863	98643005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.15	chr12	-	4696	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	-262	1128	-262	610	multi-exon	FALSE	canonical	3	24	junction_6	7.37467304150739	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTCACTATTTTTTCAG	NA	False	NA	NA	False	GATAAA	-27	NA	98703926	98644127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.16	chr12	-	5101	18	NIC	ENSMUSG00000021009.16	novel	5696	19	NA	NA	-19	603	intron_retention	FALSE	canonical	3	8	junction_17	9.67177608276555	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCAGATTCACTATT	NA	False	NA	NA	False	GATAAA	-20	NA	98700923	98644134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
ES.8227.17	chr12	-	2428	3	ISM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	-207	36634	-207	15	5prime_fragment	FALSE	canonical	3	30	junction_2	2.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGAATTCAGTTGGAC	NA	False	NA	NA	False	NA	NA	NA	98703871	98679633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98681453_98699732_98700094_98703623
ES.8227.3	chr12	-	7617	17	NIC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-199	0	intron_retention	FALSE	canonical	3	24	junction_6	7.70450355311749	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703863	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.4	chr12	-	5780	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	-218	0	-218	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37467304150739	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703882	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.5	chr12	-	6089	17	NIC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-177	0	intron_retention	FALSE	canonical	0	0	junction_15	11.2138307460029	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703841	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98699732_98700094_98703623
ES.8227.6	chr12	-	5607	19	NNC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.0384979086375	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703863	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98644938_98645534_98645696_98646215_98646297_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.7	chr12	-	6279	18	NIC	ENSMUSG00000021009.16	novel	5562	19	NA	NA	-197	0	intron_retention	FALSE	canonical	3	24	junction_5	7.55006358964032	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703861	98642999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ES.8227.8	chr12	-	5632	18	NIC	ENSMUSG00000021009.16	novel	5696	19	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	12.2477312354258	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTTCCTGTTGCA	NA	False	NA	0	True	ATTAAA	-15	NA	98700925	98643000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
ES.8228.1	chr12	+	2713	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-87	888	-62	17	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTAATGGTACTTG	NA	False	NA	41	True	ATTAAA	-38	NA	98713160	98753124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.10	chr12	+	5060	11	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-28	-906	intron_retention	FALSE	canonical	3	905	junction_10	192.232697530883	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98713194	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.102	chr12	+	3047	12	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	38	6269	20	-2507	5prime_fragment	FALSE	canonical	3	905	junction_11	185.9800042571	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTTGTTGGTATATGG	NA	False	NA	NA	False	TTTAAA	-16	NA	98713285	98747743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.103	chr12	+	2474	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	28	-1	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	458.021086365634	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713293	98753105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.105	chr12	+	3559	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	380.01236237201	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713552	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
ES.8228.106	chr12	+	3068	13	ISM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	323	-24	299	18	3prime_fragment	FALSE	canonical	3	91	junction_8	374.960738685473	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCAGCCTTCTACTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98713564	98754030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.107	chr12	+	2312	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	472	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	465.145730949353	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713737	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.108	chr12	+	2038	14	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	515	914	472	-8	3prime_fragment	FALSE	canonical	3	422	junction_9	279.608200098156	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTACATTGCTGTTT	NA	False	NA	15	True	ATTAAA	-12	NA	98713737	98753098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.109	chr12	+	2691	11	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-1005	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	485.602883022743	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98722440	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.11	chr12	+	2255	15	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_12	411.282141601115	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713195	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.110	chr12	+	3298	12	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-24	0	intron_retention	FALSE	canonical	3	883	junction_8	225.921949515153	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98723421	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.111	chr12	+	2951	12	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	11521	0	1323	0	3prime_fragment	FALSE	canonical	3	883	junction_7	228.693522585856	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98724768	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.112	chr12	+	3578	9	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-1159	0	intron_retention	FALSE	canonical	3	883	junction_7	237.930366651674	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98724942	98753107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98752001_98752833
ES.8228.113	chr12	+	4001	4	NNC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	1481	-906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	408.868628725114	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98728113	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98728761_98730081_98730238_98745366_98745527_98746306
ES.8228.114	chr12	+	1706	6	ISM	ENSMUSG00000021012.17	ENSMUST00000021399.9	1430	7	3221	-902	3221	2	3prime_fragment	FALSE	canonical	3	422	junction_1	418.589727537597	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98740501	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.115	chr12	+	8157	3	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-4795	0	intron_retention	FALSE	canonical	3	1527	junction_1	23.5	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98744794	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98751666_98751893_98752001_98752833
ES.8228.12	chr12	+	3875	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-27	0	intron_retention	FALSE	canonical	3	86	junction_13	364.948008473658	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713195	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.13	chr12	+	3152	15	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-22	2	combination_of_known_junctions	FALSE	canonical	3	86	junction_12	411.282141601115	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713200	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.14	chr12	+	2147	14	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	423.960713263072	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713200	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.15	chr12	+	3455	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-22	2	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_6	365.370397465025	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713200	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725099_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.16	chr12	+	3397	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-22	2	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	366.597993569099	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713200	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.17	chr12	+	2185	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	-39	900	-20	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713202	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.18	chr12	+	2274	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	-16	888	-16	17	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGGTAATGGTACTTG	NA	False	NA	41	True	ATTAAA	-38	NA	98713206	98753124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.19	chr12	+	4727	12	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-41	4668	-16	-906	5prime_fragment	FALSE	canonical	3	905	junction_11	185.9800042571	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98713206	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.2	chr12	+	2651	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	458.669475221537	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713173	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726566_98726670_98730081_98730238_98740503_98740579_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.20	chr12	+	2635	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713208	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.21	chr12	+	3598	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-13	17	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	370.134725260614	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713209	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
ES.8228.22	chr12	+	5948	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-13	0	intron_retention	FALSE	canonical	3	905	junction_11	190.11956471886	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713209	98753107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.24	chr12	+	3543	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-7	9	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATGTGAAGCCAGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	98713215	98754021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.25	chr12	+	4603	11	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-7	-906	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	392.779632873193	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98713215	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.27	chr12	+	3428	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-30	116	-5	-110	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTTGTTTTAAAAATTAA	NA	False	NA	NA	False	ACTAAA	-24	NA	98713217	98753896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.28	chr12	+	3071	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	-23	-2	-4	2	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713218	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.29	chr12	+	2156	15	NNC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	421.213995009469	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713222	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713334_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.3	chr12	+	3485	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-42	19	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTTCTACTGTGG	NA	False	NA	NA	False	AATAAA	-35	NA	98713180	98754031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.30	chr12	+	4842	13	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	51	intron_retention	FALSE	canonical	2	20	junction_7	397.257857764394	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTTACTGCCCCACTG	NA	False	NA	5	True	AATATA	-15	NA	98713222	98752957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726011_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98746540_98749840_98752001_98752833
ES.8228.32	chr12	+	3487	18	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	361.530225301051	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGTCTGTGTTTAAT	NA	False	NA	NA	False	AATAAA	-9	NA	98713222	98754005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833_98753488_98753532
ES.8228.33	chr12	+	3052	14	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	0	21	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	423.960713263072	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTTCTACTGTGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	98713222	98754033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.34	chr12	+	4670	11	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	-906	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	388.941705143586	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98713222	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.35	chr12	+	5613	12	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-21	3762	0	0	intron_retention	FALSE	canonical	3	905	junction_11	185.9800042571	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTAGATGTGGATTAGT	NA	False	NA	NA	False	AATAAA	-27	NA	98713226	98750250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.36	chr12	+	3758	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	-35	intron_retention	FALSE	canonical	3	883	junction_12	216.169953714407	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAACTGTTAAGATAC	NA	False	NA	NA	False	AATAAA	-22	NA	98713227	98753971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751666_98751893_98752001_98752833
ES.8228.37	chr12	+	3476	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	17	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	361.279762326464	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713227	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.39	chr12	+	3893	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	434	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	361.279762326464	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTTTTTTTTTTTCA	NA	False	NA	NA	False	TTTAAA	-6	NA	98713227	98754446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.4	chr12	+	3569	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-42	21	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_10	357.8025762816	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTTCTACTGTGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	98713180	98754033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.40	chr12	+	2449	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	368.81490424568	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGCTGTTTAATATC	NA	False	NA	21	True	ATTAAA	-18	NA	98713227	98753104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726011_98726617_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.41	chr12	+	3494	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	464.583799401859	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713227	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746615_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.42	chr12	+	4529	11	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	2	-922	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	407.236000373248	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	98713228	98749328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98746306
ES.8228.43	chr12	+	3608	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	363.6211971269	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713228	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746615_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.44	chr12	+	3466	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	2	17	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	365.349297761745	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713228	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713334_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.45	chr12	+	3447	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	465.457652925233	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713228	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
ES.8228.46	chr12	+	3814	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	363.829968658094	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGCTGTTTAATATC	NA	False	NA	21	True	ATTAAA	-18	NA	98713229	98753104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98747730_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.47	chr12	+	2492	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-17	1039	4	-50	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGTGTCTAATTTTTC	NA	False	NA	21	True	AATATA	-31	NA	98713230	98752973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.48	chr12	+	3402	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	454.167878897465	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713232	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.49	chr12	+	3503	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	453.490283798892	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATCTATAAAAGTCTGT	NA	False	NA	NA	False	AATAAA	-2	NA	98713233	98753998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751670_98751893_98752001_98752833
ES.8228.5	chr12	+	3603	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-64	-25	-39	25	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTACTGTGGTCATTG	NA	False	NA	NA	False	AATAAA	-41	NA	98713183	98754037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.50	chr12	+	3417	14	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	7	17	intron_retention	FALSE	canonical	3	422	junction_10	279.731972308067	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713233	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751666_98751893_98752001_98752833
ES.8228.52	chr12	+	2472	13	NIC	ENSMUSG00000021012.17	novel	3046	14	NA	NA	7	-3	intron_retention	FALSE	canonical	3	91	junction_8	374.960738685473	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTGCTGTTTAATAT	NA	False	NA	20	True	ATTAAA	-17	NA	98713233	98753103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.53	chr12	+	3434	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-5	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	378.403629299015	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713236	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.54	chr12	+	2050	12	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-4	-3554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	397.878942509606	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTCCCTCTGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	98713237	98746696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726566_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.55	chr12	+	3468	14	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-3	17	intron_retention	FALSE	canonical	3	422	junction_9	279.608200098156	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713238	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.56	chr12	+	2030	8	ISM	ENSMUSG00000021012.17	ENSMUST00000222461.2	2012	13	13	22123	-2	6135	5prime_fragment	FALSE	canonical	3	51	junction_2	453.854602268171	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGGCATTAAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	98713239	98730961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081
ES.8228.57	chr12	+	2473	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	-52	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	362.351817773487	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAAGTGTCTAATTTT	NA	False	NA	19	True	AATATA	-29	NA	98713239	98752971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751901_98752001_98752833
ES.8228.59	chr12	+	2073	15	NNC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	-2	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	426.382415544678	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTACTGCCCCACTGA	NA	False	NA	6	True	AATATA	-16	NA	98713239	98752958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713740_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.6	chr12	+	4012	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	-64	-434	-39	434	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTTTTTTTTTTTCA	NA	False	NA	NA	False	TTTAAA	-6	NA	98713183	98754446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.62	chr12	+	3043	6	NNC	ENSMUSG00000021012.17	novel	3046	14	NA	NA	-2	-923	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	560.124486163567	1086	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAGAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98713239	98749327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723315_98746708
ES.8228.63	chr12	+	3414	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	370.249219276692	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713239	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751282_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.64	chr12	+	3434	18	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	-32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	361.530225301051	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACTGTTAAGATACAAT	NA	False	NA	NA	False	AATAAA	-25	NA	98713239	98753974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746431_98746480_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.65	chr12	+	5839	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	-1	intron_retention	FALSE	canonical	2	81	junction_9	362.435842316842	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713241	98753105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.66	chr12	+	3382	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_9	459.616825917706	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGAAGCCAGCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	98713241	98754022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.67	chr12	+	3210	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	17	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	522.716936358059	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCAGCCTTCTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	98713241	98754029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713334_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726011_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.68	chr12	+	3698	13	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	422	junction_10	290.439752788767	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713242	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98751666_98751893_98752001_98752833
ES.8228.69	chr12	+	4090	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	883	junction_12	222.46298706132	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713243	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98751666_98751893_98752001_98752833
ES.8228.7	chr12	+	3201	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	-34	-21	-34	21	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTTCTACTGTGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	98713188	98754033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.70	chr12	+	1852	14	NNC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	3	51	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_5	520.771980449507	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTTACTGCCCCACTG	NA	False	NA	5	True	AATATA	-15	NA	98713244	98752957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725099_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.71	chr12	+	3445	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	363.829968658094	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713244	98754012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746468_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.72	chr12	+	3309	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	371.347498771366	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGTGTTTAATAAT	NA	False	NA	NA	False	AATAAA	-12	NA	98713245	98754008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98724998_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.75	chr12	+	3347	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-2	21	combination_of_known_splicesites	FALSE	canonical	2	51	junction_2	468.425657857013	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTTCTACTGTGGTC	NA	False	NA	NA	False	AATAAA	-37	NA	98713245	98754033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.77	chr12	+	3046	15	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	9	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	421.213995009469	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATGTGAAGCCAGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	98713247	98754021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713334_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.78	chr12	+	2634	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	370.134725260614	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTGCTGTTTAATAT	NA	False	NA	20	True	ATTAAA	-17	NA	98713247	98753103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
ES.8228.79	chr12	+	2523	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	365.349297761745	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713247	98753105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713334_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.8	chr12	+	3912	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-33	19	intron_retention	FALSE	canonical	3	883	junction_11	215.365013149511	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTTCTACTGTGG	NA	False	NA	NA	False	AATAAA	-35	NA	98713189	98754031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.80	chr12	+	2948	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	18	intron_retention	FALSE	canonical	3	883	junction_11	215.365013149511	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTAATGGTACTTGC	NA	False	NA	42	True	ATTAAA	-39	NA	98713247	98753125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.81	chr12	+	5466	11	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	0	4668	0	-906	intron_retention	FALSE	canonical	3	933	junction_10	157.904908093447	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCTTCTCTATTCTAC	NA	False	NA	NA	False	NA	NA	NA	98713247	98749344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366
ES.8228.82	chr12	+	3037	15	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	18	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_6	421.199477682487	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCAGCCTTCTACTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98713247	98754030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725099_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.83	chr12	+	3495	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	463.896704389835	1098	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGTCTGTGTTTAATA	NA	False	NA	NA	False	AATAAA	-10	NA	98713247	98754006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722478_98723267_98723464_98724776_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.84	chr12	+	3541	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	432	combination_of_known_junctions	FALSE	canonical	3	86	junction_12	411.282141601115	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTTTTTTTTTTTTTT	NA	False	NA	NA	False	TTTAAA	-4	NA	98713247	98754444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.86	chr12	+	2558	13	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	3	53	intron_retention	FALSE	canonical	3	422	junction_10	282.4743228252	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTACTGCCCCACTGAA	NA	False	NA	7	True	AATATA	-17	NA	98713250	98752959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98752001_98752833
ES.8228.87	chr12	+	1907	11	NNC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	3	-8622	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	535.475265535207	1065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGTCTGTGCCTTGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	98713250	98741628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726566_98726670_98730081_98730238_98740503_98740579_98741208
ES.8228.89	chr12	+	3692	12	ISM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	3	5659	3	-1897	5prime_fragment	FALSE	canonical	3	905	junction_11	185.9800042571	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGGGCAGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	98713250	98748353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306
ES.8228.9	chr12	+	2546	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713194	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.90	chr12	+	2933	13	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	4	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	512.540784285071	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCAGCCTTCTACTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	98713251	98754030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730244_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.91	chr12	+	2678	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	363.6211971269	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713252	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746615_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.92	chr12	+	2364	14	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-5	289	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	379.007782780623	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGATTTGAGCATTGT	NA	False	NA	NA	False	ATTAAA	-45	NA	98713253	98751540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746304_98746540_98749840_98749962_98751174
ES.8228.93	chr12	+	2117	14	NIC	ENSMUSG00000021012.17	novel	3046	14	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	479.226213091072	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713257	98753105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8228.94	chr12	+	2587	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	367.570231384425	1097	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCTGTTTAATATCA	NA	False	NA	22	True	ATTAAA	-19	NA	98713257	98753105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722475_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ES.8228.96	chr12	+	6159	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	905	junction_11	196.007652911819	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTGTTTAATATCAT	NA	False	NA	23	True	ATTAAA	-20	NA	98713262	98753106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98749962_98751174_98751666_98751893_98752001_98752833
ES.8228.98	chr12	+	2423	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	6	51	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTTACTGCCCCACTG	NA	False	NA	5	True	AATATA	-15	NA	98713271	98752957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ES.8229.1	chr12	+	1660	1	Antisense	novelGene_ENSMUSG00000051166.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATATGTTTTGTTTTG	1336	False	NA	NA	False	AATAAA	-18	NA	98756344	98758004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_98756300_98758000
ES.823.1	chr1	+	1879	1	FSM	ENSMUSG00000101849.2	ENSMUST00000189147.2	1849	1	-30	0	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGTCTCGATTCTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	77491886	77493765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_77491900_77493800
ES.8230.1	chr12	+	229	1	Intergenic	novelGene_6800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGACAGAAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	98845948	98846177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_98845900_98846200
ES.8231.1	chr12	-	1677	9	Antisense	novelGene_ENSMUSG00000113196.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAAAGGTGCCTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	98740903	98713704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_98713779_98719033_98719151_98722442_98722482_98723264_98723462_98724768_98725199_98725975_98726136_98726565_98726664_98730075_98730236_98740501
ES.8231.2	chr12	-	2865	7	Antisense	novelGene_ENSMUSG00000113196.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98740905	98713725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_98713779_98719033_98719151_98722442_98722482_98723264_98723462_98724768_98726664_98730075_98730236_98740501
ES.8231.3	chr12	-	2856	1	Antisense	novelGene_ENSMUSG00000021012.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAAAACCATCATGCA	NA	False	NA	NA	False	AATAAA	-15	NA	98722897	98720041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_98720000_98722900
ES.8231.4	chr12	-	3475	7	Antisense	novelGene_ENSMUSG00000113196.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	98740527	98720077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_98722482_98723264_98723462_98724768_98725199_98725975_98726137_98726566_98726664_98730075_98730236_98740501
ES.8232.1	chr12	-	4440	7	FSM	ENSMUSG00000051166.11	ENSMUST00000222717.2	2136	7	13	-2317	13	-27	multi-exon	TRUE	canonical	3	28	junction_6	7.43863786814047	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATAGAATTTGGCT	NA	False	NA	NA	False	ATTAAA	-26	NA	98760879	98753090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689
ES.8232.10	chr12	-	7505	8	NNC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	-1	-423	intron_retention	FALSE	canonical	0	0	junction_7	15.2863818278805	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGCATTCCAAAGAACT	NA	False	NA	-24	True	AGTAAA	-1	NA	98766246	98753486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762784
ES.8232.12	chr12	-	4022	1	NIC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	488	953	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACGTTTTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	98758472	98754450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98754400_98758500
ES.8232.13	chr12	-	6145	30	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-32636	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	12.5205182373664	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACGTTTTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	98826260	98754450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217
ES.8232.14	chr12	-	4207	16	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	1902	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.1858648895332	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACGTTTTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	98791722	98754450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637
ES.8232.15	chr12	-	8309	40	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	32	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	11.9411773278991	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACGTTTTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	98867711	98754450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.16	chr12	-	8294	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	42	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	13.4976849866931	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACGTTTTAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	98867701	98754450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762784_98762881_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831627_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.17	chr12	-	5507	8	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	101913	-316	415	316	intron_retention	FALSE	canonical	3	28	junction_6	7.10561720882622	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTACTATTTTTGTC	NA	False	NA	NA	False	AGTAAA	-15	NA	98765830	98755087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765
ES.8232.18	chr12	-	7309	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	38	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	12.9999759615162	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTTTGTCTAAGCAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	98867705	98755394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831627_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.19	chr12	-	2467	10	NNC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	-962	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	13.5053715879422	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTTTGTCTAAGCAGT	NA	False	NA	NA	False	ATTAAA	-26	NA	98767254	98755394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765179_98767166
ES.8232.2	chr12	-	5339	8	ISM	ENSMUSG00000051166.11	ENSMUST00000065716.8	9482	41	103388	405	1196	-405	3prime_fragment	FALSE	canonical	3	28	junction_6	7.10561720882622	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCATATATTTTTACAT	NA	False	NA	-6	True	AGTAAA	-19	NA	98764043	98753468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765
ES.8232.20	chr12	-	7546	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.3993990210973	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGAAGTTTTGTCTAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	98867704	98755398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.21	chr12	-	6915	15	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	1879	3	intron_retention	FALSE	non_canonical	0	0	junction_8	15.0617775463968	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGGAAGTTTTGTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	98791745	98755400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98763435_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637
ES.8232.22	chr12	-	7482	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	40	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	11.5667627277471	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGGAAGTTTTGTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	98867703	98755400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790884_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842514_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.23	chr12	-	9525	40	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	0	2	intron_retention	FALSE	non_canonical	0	0	junction_10	8.90257001063256	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAAGGAAGTTTTGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	98867743	98755401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.24	chr12	-	7573	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.05921492183511	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAAGGAAGTTTTGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	98867745	98755401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.25	chr12	-	4033	22	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-14262	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	10.0691486781178	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCATCAAGGAAGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98807886	98755407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809
ES.8232.26	chr12	-	6145	21	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-14230	0	intron_retention	FALSE	non_canonical	0	0	junction_10	13.1889158007776	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCATCAAGGAAGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98807854	98755407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797270_98797330_98797484_98803501_98803644_98807809
ES.8232.27	chr12	-	4608	13	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-12468	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	16.2555546062125	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCATCAAGGAAGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98781151	98755407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98779420
ES.8232.28	chr12	-	7526	42	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	-2	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	7.29508892523777	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98867704	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.29	chr12	-	3166	15	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	2617	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	16.8294263668354	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98791007	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892
ES.8232.3	chr12	-	6479	25	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-25278	-405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	14.1479655977655	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCCATATATTTTTACAT	3334	False	NA	-6	True	AGTAAA	-19	NA	98818902	98753468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866
ES.8232.31	chr12	-	7622	42	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	47	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.4452340773957	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98867696	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.32	chr12	-	7539	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	29	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	11.6081598455569	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98867714	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817736_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.33	chr12	-	5294	7	FSM	ENSMUSG00000051166.11	ENSMUST00000222717.2	2136	7	-3160	2	1187	-2	multi-exon	FALSE	canonical	3	28	junction_6	7.43863786814047	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98764052	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689
ES.8232.34	chr12	-	4275	23	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-15405	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	15.3044178788862	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATCGCATCAAGGAAG	NA	False	NA	NA	False	ATTAAA	-11	NA	98809029	98755409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791763_98793592_98793770_98794965_98795055_98797118_98797270_98797330_98797484_98803501_98803644_98807809_98807938_98808930
ES.8232.35	chr12	-	4053	21	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-3827	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	13.4383778783006	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCGCATCAAGGA	NA	False	NA	NA	False	ATTAAA	-9	NA	98797451	98755411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768734_98776777_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330
ES.8232.36	chr12	-	7365	40	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	42	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	10.1206398230226	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCGCATCAAGGA	NA	False	NA	NA	False	ATTAAA	-9	NA	98867701	98755411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.37	chr12	-	7507	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.1911726508778	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCGCATCAAGGA	NA	False	NA	NA	False	ATTAAA	-9	NA	98867713	98755411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767166_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.38	chr12	-	5253	1	NIC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	228	-4	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCGCATCAAGGA	NA	False	NA	NA	False	ATTAAA	-9	NA	98760664	98755411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98755400_98760700
ES.8232.39	chr12	-	3852	8	NIC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	-533	-7	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	13.1893587286672	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAACACATCGCATCAA	NA	False	NA	NA	False	ATTAAA	-6	NA	98766825	98755414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98756646_98756871_98756973_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049
ES.8232.4	chr12	-	9462	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	-408	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.05921492183511	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGTCCATATATTTTTA	NA	False	NA	-9	True	AGTAAA	-16	NA	98867704	98753471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.40	chr12	-	5071	8	NNC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	502	-10	intron_retention	FALSE	canonical	0	0	junction_7	15.2863818278805	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAATGAACACATCGCAT	NA	False	NA	NA	False	ATTAAA	-3	NA	98765743	98755417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762784
ES.8232.41	chr12	-	7231	39	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	46	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	10.5310515662688	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAGAAATGAACACAT	NA	False	NA	NA	False	NA	NA	NA	98867697	98755422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.42	chr12	-	6829	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	30	-394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	9.05921492183511	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTTGTATTGAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	98867401	98755801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.43	chr12	-	6931	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	42	-394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	11.2376320904361	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTTGTATTGAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	98867701	98755801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767349_98767371_98768542_98768734_98776777_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.44	chr12	-	6880	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	40	-395	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	11.1242977306435	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTGTATTGAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	98867703	98755802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791763_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817740_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.45	chr12	-	7016	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	42	-410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	13.0493055370774	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCATAAAGTTTTATA	NA	False	NA	NA	False	AATAAA	-1	NA	98867701	98755817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831627_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98848234_98848334_98853240_98853401_98867090
ES.8232.46	chr12	-	7444	34	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	30369	-416	intron_retention	FALSE	non_canonical	0	0	junction_3	12.55971960172	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACCTGGGCATAAAGT	NA	False	NA	NA	False	AATAAA	-43	NA	98837062	98755823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758264_98758387_98758774_98758938_98760372_98760546_98760689_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787874_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025
ES.8232.47	chr12	-	7027	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-41	586	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	10.3993990210973	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTATGGCCTCATTAATA	9975	False	NA	NA	False	TATAAA	-12	NA	98867784	98755997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.48	chr12	-	5077	31	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	-333	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.3890632772978	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCTTTAAAAGTCTGA	NA	False	NA	NA	False	CATAAA	-1	NA	98867704	98767032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98767384_98776773_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797233_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.49	chr12	-	5034	31	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	38	-384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.26786562987041	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAACTGTAACCCGAC	NA	False	NA	NA	False	CATAAA	-15	NA	98867705	98767083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98767384_98776773_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.5	chr12	-	9583	42	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	4	-409	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	11.0639802840729	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGTCCATATATTTTT	NA	False	NA	-10	True	AGTAAA	-15	NA	98867739	98753472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98787858_98787965_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.50	chr12	-	5181	32	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	29	-422	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	9.11962355686564	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTACTGTGTATTCA	NA	False	NA	NA	False	NA	NA	NA	98867714	98767121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.51	chr12	-	5190	33	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	29	-426	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.97544393052511	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCTTACTGTGTA	NA	False	NA	NA	False	NA	NA	NA	98867714	98767125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.52	chr12	-	7018	30	Fusion	ENSMUSG00000113020.2_ENSMUSG00000051166.11	novel	551	6	NA	NA	39	-2215	multi-exon	FALSE	canonical	0	0	junction_26	11.0409463827766	92	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAAAAATTTTGAG	NA	False	NA	NA	False	TATAAA	-10	NA	98867704	98779156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_98781603_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842514_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.53	chr12	-	4763	25	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	30	-11121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.18473597878567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTTCATCAATATAATT	NA	False	NA	NA	False	AATAAA	-21	NA	98867713	98793348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98794188_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.54	chr12	-	4367	25	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	0	37953	0	-11129	5prime_fragment	FALSE	canonical	3	20	junction_22	6.45927412502537	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTATTCCTTTCATCA	NA	False	NA	NA	False	AATAAA	-13	NA	98867743	98793356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.55	chr12	-	4005	25	NNC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	39	-11870	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.18473597878567	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	98867704	98794097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98794188_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.56	chr12	-	4620	1	NIC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	-5631	-12408	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	98799255	98794635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98794600_98799300
ES.8232.57	chr12	-	5973	13	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	39	-40485	intron_retention	FALSE	canonical	3	20	junction_10	5.77530662966623	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACACTGTTCGTGGCTTTA	NA	False	NA	NA	False	TATAAA	-11	NA	98867704	98822712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.58	chr12	-	2843	10	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	0	73222	0	-46398	5prime_fragment	FALSE	canonical	3	20	junction_7	6.39444203108363	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTGCTTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	98867743	98828625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.6	chr12	-	9533	41	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	-35	-411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	12.6530381727078	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTCCATATATTT	9981	False	NA	-12	True	AGTAAA	-13	NA	98867778	98753474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98776758_98776877_98782189_98782324_98784078_98784158_98790881_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807923_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.60	chr12	-	2794	8	ISM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	41	80430	41	-53606	5prime_fragment	FALSE	canonical	3	20	junction_5	6.74914960629584	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACACATGCACAGTGAATT	NA	False	NA	NA	False	ATTAAA	-20	NA	98867702	98835833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.61	chr12	-	5478	1	Intergenic	novelGene_6801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTATTTAAAACAAAGAA	NA	False	NA	NA	False	NA	NA	NA	98866683	98861205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_98861200_98866700
ES.8232.7	chr12	-	9302	40	NNC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	38	-411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	10.3959102867587	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTCCATATATTT	NA	False	NA	-12	True	AGTAAA	-13	NA	98867705	98753474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98767161_98767371_98768542_98768717_98776758_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8232.8	chr12	-	5065	7	FSM	ENSMUSG00000051166.11	ENSMUST00000222717.2	2136	7	-996	-1933	-996	-411	multi-exon	FALSE	canonical	3	28	junction_6	7.43863786814047	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTCCATATATTT	NA	False	NA	-12	True	AGTAAA	-13	NA	98761888	98753474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689
ES.8232.9	chr12	-	9267	40	NNC	ENSMUSG00000051166.11	novel	9482	41	NA	NA	39	-411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.6725541639377	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGTCCATATATTT	NA	False	NA	-12	True	AGTAAA	-13	NA	98867704	98753474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_98756646_98756867_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760689_98760879_98762765_98762881_98765049_98765189_98767161_98767371_98768542_98768728_98776773_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ES.8233.1	chr12	-	179	1	Intergenic	novelGene_6802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTTCAAGGCCA	2945	False	NA	NA	False	NA	NA	NA	98874814	98874635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_98874600_98874800
ES.8234.1	chr12	+	2242	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	33	-3	-5	3	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTTCACTTTTCACAA	NA	False	NA	NA	False	AATAAA	-13	NA	98886865	98949494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ES.8234.2	chr12	+	4784	1	FSM	ENSMUSG00000021013.17	ENSMUST00000223277.2	942	1	-45	-3797	-45	-1413	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTAGCTTTCTCCTTTT	NA	False	NA	NA	False	NA	NA	NA	98930786	98935570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_98930800_98935600
ES.8235.1	chr12	+	174	1	Intergenic	novelGene_6803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCCTAAGA	NA	False	NA	NA	False	NA	NA	NA	98970677	98970851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_98970700_98970900
ES.8236.1	chr12	+	229	1	FSM	ENSMUSG00000062582.7	ENSMUST00000076166.7	345	1	165	-49	165	49	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGGTCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	99013653	99013882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_99013700_99013900
ES.8237.1	chr12	+	2757	1	Intergenic	novelGene_6805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGTTATTCCCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	99213731	99216488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99213700_99216500
ES.8238.1	chr12	+	180	1	Intergenic	novelGene_6807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTCTATTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	99273882	99274062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99273900_99274100
ES.8239.1	chr12	+	215	1	Intergenic	novelGene_6808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTTTCTTAGTGGGCCT	NA	False	NA	NA	False	NA	NA	NA	99306749	99306964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99306700_99307000
ES.824.1	chr1	-	6682	18	FSM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	27	-394	27	390	multi-exon	TRUE	canonical	3	112	junction_15	30.5422731607683	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTTTTTTTATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	77491689	77343431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.12	chr1	-	5732	16	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-67823	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	49.3186464624577	412	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	NA	False	NA	-3	True	AATAAA	-23	NA	77422067	77343821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77421783
ES.824.16	chr1	-	6411	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	1500	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTGGTTGTCTTTGT	NA	False	NA	-5	True	AATAAA	-21	NA	77490216	77343823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77489983
ES.824.17	chr1	-	6389	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	272	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTGGTTGTCTTTGT	NA	False	NA	-5	True	AATAAA	-21	NA	77491444	77343823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491233
ES.824.18	chr1	-	6864	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	2088	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_17	46.9107228355631	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATCTGGTTGTCTTTGT	NA	False	NA	-5	True	AATAAA	-21	NA	77489628	77343823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77488942
ES.824.2	chr1	-	6385	18	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-25	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	46.5081010170015	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77491750	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77346309_77349546_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.20	chr1	-	4945	16	NNC	ENSMUSG00000026235.15	novel	6315	18	NA	NA	8467	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	43.3276919404772	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAATCTGGTTGTCTTT	5450	False	NA	-7	True	AATAAA	-19	NA	77483249	77343825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77350110_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ES.824.21	chr1	-	5956	17	NIC	ENSMUSG00000026235.15	novel	6315	18	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	48.7389410533302	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAATCTGGTTGTCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	77491696	77343825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.22	chr1	-	6772	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	2100	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAAATCTGGTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	77489616	77343828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77489017
ES.824.23	chr1	-	6291	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	851	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTGAAATCTGGTTG	NA	False	NA	-12	True	AATAAA	-14	NA	77490865	77343830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77490745
ES.824.25	chr1	-	2601	2	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	141705	347	4233	-347	3prime_fragment	FALSE	canonical	3	243	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTTGTATTACTCCA	NA	False	NA	NA	False	AATAAA	-14	NA	77350011	77344172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_77346309_77349546
ES.824.26	chr1	-	5370	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	-6	964	-6	-960	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGTGTATGGCATTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	77491731	77344785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.27	chr1	-	4892	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	1	1435	1	-1431	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATATGTGTGTCAGCCTT	NA	False	NA	NA	False	AATATA	-32	NA	77491724	77345256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.28	chr1	-	4909	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	2093	-1957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCTGAATATCTCTTT	NA	False	NA	NA	False	TATAAA	-24	NA	77489623	77345782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77488933
ES.824.29	chr1	-	4373	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	-6	1961	-6	-1957	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCTGAATATCTCTTT	NA	False	NA	NA	False	TATAAA	-24	NA	77491731	77345782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.3	chr1	-	6317	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	20	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	47.2823368411781	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77491696	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488403_77491577
ES.824.30	chr1	-	4874	4	ISM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	134408	1961	-3064	-1961	3prime_fragment	FALSE	canonical	3	180	junction_2	28.003967972811	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGACCTGAATATCT	NA	False	NA	NA	False	TATAAA	-20	NA	77357308	77345786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050
ES.824.31	chr1	-	3283	7	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-10317	-1961	intron_retention	FALSE	canonical	3	151	junction_6	32.0728337797998	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGACCTGAATATCT	NA	False	NA	NA	False	TATAAA	-20	NA	77364561	77345786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77346309_77349546_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433
ES.824.32	chr1	-	2594	10	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-10961	-1962	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.3544366752843	374	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATGACCTGAATATC	NA	False	NA	NA	False	TATAAA	-19	NA	77365205	77345787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77353406_77353488_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109
ES.824.33	chr1	-	3532	16	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	8511	-1962	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	48.8958075912445	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATGACCTGAATATC	5494	False	NA	NA	False	TATAAA	-19	NA	77483205	77345787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77346309_77349546_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184
ES.824.35	chr1	-	3350	17	NIC	ENSMUSG00000026235.15	novel	3612	17	NA	NA	1	184	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	40.9438926306476	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCGATGCTGTATTTCCC	NA	False	NA	-6	True	AATAAA	-14	NA	77491724	77350065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.36	chr1	-	3408	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-1108	181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	41.6127309505472	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCGATGCTGTATTT	NA	False	NA	-9	True	AATAAA	-11	NA	77492833	77350068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577_77491702_77492720
ES.824.37	chr1	-	4333	1	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-1754	-1398	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAAAGCACGT	NA	False	NA	NA	False	NA	NA	NA	77355998	77351665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77351700_77356000
ES.824.38	chr1	-	5438	1	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-5043	-3582	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGTCCCAGAGCCATG	NA	False	NA	NA	False	NA	NA	NA	77359287	77353849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77353800_77359300
ES.824.39	chr1	-	2953	15	ISM	ENSMUSG00000026235.15	ENSMUST00000188797.7	3612	17	-6	4075	-6	-3583	5prime_fragment	FALSE	canonical	3	112	junction_12	19.6968090236537	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGGTCCCAGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	77491731	77353850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.4	chr1	-	6374	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	-43	-3	-43	3	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77491768	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ES.824.40	chr1	-	2255	6	ISM	ENSMUSG00000026235.15	ENSMUST00000190149.7	3043	16	113753	12669	-23719	10497	internal_fragment	FALSE	canonical	3	129	junction_5	16.2677595261302	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATTGCACAATGGC	NA	False	NA	NA	False	AATAAA	-12	NA	77377963	77362936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836
ES.824.41	chr1	-	4040	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTATATTTGCACTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	77396941	77392901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77392900_77396900
ES.824.42	chr1	-	3264	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCATTTCTGTAGAAT	NA	False	NA	NA	False	AAGAAA	-44	NA	77398838	77395574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77395600_77398800
ES.824.43	chr1	-	8612	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTCCCCAGGCATTT	NA	False	NA	NA	False	AAAAAG	-33	NA	77432684	77424072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77424100_77432700
ES.824.44	chr1	-	6371	2	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTCACAGCACACAA	NA	False	NA	NA	False	TTTAAA	-37	NA	77442040	77434434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77434880_77436114
ES.824.45	chr1	-	5384	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-8	NA	77439847	77434463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77434500_77439800
ES.824.46	chr1	-	3935	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTTAGGCAGAAATCTA	5905	False	NA	NA	False	AAAAAG	-43	NA	77482794	77478859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_77478900_77482800
ES.824.5	chr1	-	5217	14	NIC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	-67329	3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_4	50.1069861313929	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77421573	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501
ES.824.6	chr1	-	6255	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	1413	3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_17	46.9107228355631	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77490303	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77490231
ES.824.9	chr1	-	6307	18	NNC	ENSMUSG00000026235.15	novel	6328	18	NA	NA	2094	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	47.2823368411781	425	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTTGTTCTGT	NA	False	NA	0	True	AATAAA	-26	NA	77489622	77343818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77489498
ES.8240.1	chr12	+	1754	1	Intergenic	novelGene_6809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTCTGGCCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	99340664	99342418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99340700_99342400
ES.8241.1	chr12	+	2388	1	Antisense	novelGene_ENSMUSG00000033713.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99354719	99357107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_99354700_99357100
ES.8242.1	chr12	+	229	1	Intergenic	novelGene_6812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGACCAACACCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99400920	99401149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99400900_99401100
ES.8243.1	chr12	+	189	1	Intergenic	novelGene_6815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAAAAAGTGTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	99507411	99507600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99507400_99507600
ES.8244.1	chr12	-	7772	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	123	-5013	123	-3	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATTGTGTGTTGTGTA	NA	False	NA	NA	False	AATAAA	-27	NA	99359208	99156339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.10	chr12	-	3871	7	NNC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	93	1019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.4617474911243	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTCCTTGAGGTCTAA	NA	False	NA	NA	False	NA	NA	NA	99359238	99160333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99167937_99168001_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.11	chr12	-	2902	1	NIC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	94297	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTTCCTTGAGGT	9181	False	NA	NA	False	NA	NA	NA	99163239	99160337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99160300_99163200
ES.8244.12	chr12	-	3989	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	-29	1015	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	39.7020150622106	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTTTCCTTGAGGT	NA	False	NA	NA	False	NA	NA	NA	99359360	99160337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185859_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.14	chr12	-	4417	7	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-6520	985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	33.3449979590476	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99329798	99160367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99306727_99306911_99307680_99307794_99328619
ES.8244.15	chr12	-	3781	7	NNC	ENSMUSG00000033713.13	novel	2611	6	NA	NA	-41	985	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.5890653036285	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99529882	99160367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99416283_99416366_99529729
ES.8244.16	chr12	-	4693	2	ISM	ENSMUSG00000033713.13	ENSMUST00000222458.2	617	4	79830	-2302	79829	985	3prime_fragment	FALSE	canonical	3	94	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99177707	99160367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_99163073_99175719
ES.8244.17	chr12	-	3540	2	NIC	ENSMUSG00000033713.13	novel	617	4	NA	NA	70845	985	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8027	False	NA	NA	False	NA	NA	NA	99186691	99160367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99185856
ES.8244.19	chr12	-	3450	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	31	-599	31	599	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTGTGTACGATAGACT	NA	False	NA	NA	False	NA	NA	NA	99359300	99160753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.2	chr12	-	6615	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	-2	-1351	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTGTTCCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	99359333	99157687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.20	chr12	-	2771	5	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-5418	596	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	37.2516778145629	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAGTGTGTACGATAG	NA	False	NA	NA	False	NA	NA	NA	99328696	99160756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99328525
ES.8244.21	chr12	-	3495	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	12	559	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTGTTTAACACGA	NA	False	NA	75	True	NA	NA	NA	99359319	99160793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.22	chr12	-	2593	5	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	13050	475	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	36.834087473426	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTGAGCTCTGTACT	NA	False	NA	-9	True	TATAAA	-27	NA	99310228	99160877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99310114
ES.8244.23	chr12	-	3351	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	-2	-467	-2	467	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTTGGATGGTTGAGC	NA	False	NA	-17	True	TATAAA	-19	NA	99359333	99160885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.25	chr12	-	3229	7	NIC	ENSMUSG00000033713.13	novel	2611	6	NA	NA	-327	144	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.5890653036285	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTATTCAAAAATA	NA	False	NA	NA	False	NA	NA	NA	99530168	99161208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99416283_99416369_99529729
ES.8244.26	chr12	-	3026	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	-13	-131	-13	131	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99359344	99161221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.27	chr12	-	3078	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	1	131	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99359330	99161221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.28	chr12	-	3709	1	NIC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	92606	131	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	7490	False	NA	NA	False	NA	NA	NA	99164930	99161221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99161200_99164900
ES.8244.29	chr12	-	2228	5	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-5434	131	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	37.2516778145629	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99328712	99161221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99328619
ES.8244.3	chr12	-	4327	5	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-5418	2246	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	37.2516778145629	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTGTTTTTTTG	NA	False	NA	-5	True	ATTAAA	-20	NA	99328696	99159106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99328619
ES.8244.30	chr12	-	3092	8	NNC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	50	131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.7180203820169	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99359281	99161221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99167937_99168001_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.31	chr12	-	2857	7	NIC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	36	129	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	40.8438761899776	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCACAAAAACAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	99378828	99161223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99378727
ES.8244.32	chr12	-	2309	6	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	13049	127	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	42.1312235758707	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCACAAAAACAAACTT	NA	False	NA	NA	False	NA	NA	NA	99310229	99161225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99185859_99185923_99257495_99257561_99307680_99307794_99310114
ES.8244.33	chr12	-	2848	6	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	1014	120	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.9262079247089	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAATCACAAAAA	NA	False	NA	NA	False	NA	NA	NA	99358317	99161232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99358150
ES.8244.34	chr12	-	2688	6	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-34	91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	34.9262079247089	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99360090	99161261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99360054
ES.8244.35	chr12	-	2511	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	0	371	0	-371	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCCTGAAGGTTGGTCC	NA	False	NA	NA	False	NA	NA	NA	99359331	99161723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.36	chr12	-	1282	6	NNC	ENSMUSG00000033713.13	novel	7705	6	NA	NA	-5418	452	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	41.8138732958333	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAGCCAAA	NA	False	NA	NA	False	AATACA	-11	NA	99328696	99162217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99328619
ES.8244.37	chr12	-	1914	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	100	868	100	449	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAAAAAAAGCC	NA	False	NA	NA	False	AATACA	-8	NA	99359231	99162220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.38	chr12	-	1962	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	57	388	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCATATTGACACTCAG	NA	False	NA	NA	False	TTTAAA	-18	NA	99359274	99162281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.39	chr12	-	2343	1	Intergenic	novelGene_6804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGTGTTCTGCAGCCC	NA	False	NA	NA	False	NA	NA	NA	99200245	99197902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99197900_99200200
ES.8244.4	chr12	-	4261	7	NNC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	1	2235	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.8265543642906	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTTTTGTTTTTGGTT	NA	False	NA	-16	True	ATTAAA	-9	NA	99359330	99159117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99160367_99161221_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.40	chr12	-	5820	3	Intergenic	novelGene_6806	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTACACGCCTTGATT	NA	False	NA	NA	False	NA	NA	NA	99225061	99219086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99221315_99221401_99222930_99222997
ES.8244.41	chr12	-	223	1	FSM	ENSMUSG00000113003.2	ENSMUST00000223213.2	3370	1	3197	-50	3197	50	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCGGCGAGAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	99332975	99332752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99332800_99333000
ES.8244.42	chr12	-	2322	1	Intergenic	novelGene_6810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99349258	99346936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99346900_99349300
ES.8244.43	chr12	-	174	1	Intergenic	novelGene_6811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATACGATTTAAAA	6675	False	NA	NA	False	NA	NA	NA	99370306	99370132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99370100_99370300
ES.8244.44	chr12	-	184	1	Intergenic	novelGene_6813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGTACATCCTGT	6843	False	NA	NA	False	NA	NA	NA	99413667	99413483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99413500_99413700
ES.8244.45	chr12	-	183	1	Intergenic	novelGene_6814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTATTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	99463262	99463079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99463100_99463300
ES.8244.46	chr12	-	4041	1	Intergenic	novelGene_6816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTTAGCACCTCGAGTC	NA	False	NA	NA	False	NA	NA	NA	99520725	99516684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99516700_99520700
ES.8244.5	chr12	-	4819	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	96	1967	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGGCTGTTTGTAGC	NA	False	NA	NA	False	AAAACA	-13	NA	99359235	99159385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8244.6	chr12	-	4570	7	NIC	ENSMUSG00000033713.13	novel	2611	6	NA	NA	-347	1465	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.5890653036285	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCCACCCCCACCCCC	NA	False	NA	NA	False	NA	NA	NA	99530188	99159887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99416283_99416369_99529729
ES.8244.7	chr12	-	4114	8	NNC	ENSMUSG00000033713.13	novel	2611	6	NA	NA	-274	1019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	41.6133808935029	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTCCTTGAGGTCTAA	NA	False	NA	NA	False	NA	NA	NA	99530115	99160333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99416283_99416366_99529729
ES.8244.8	chr12	-	2936	4	NNC	ENSMUSG00000033713.13	novel	404	4	NA	NA	-654	1019	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	38.9643711898732	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTCCTTGAGGTCTAA	NA	False	NA	NA	False	NA	NA	NA	99296976	99160333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_99163073_99175719_99175826_99257495_99257561_99296950
ES.8244.9	chr12	-	3904	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	-3	-1019	-3	1019	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTCCTTGAGGTCTAA	NA	False	NA	NA	False	NA	NA	NA	99359334	99160333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ES.8245.1	chr12	-	157	1	Intergenic	novelGene_6817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	99531785	99531628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99531600_99531800
ES.8246.1	chr12	-	4591	1	Intergenic	novelGene_6818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGTAGTGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	99659102	99654511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99654500_99659100
ES.8247.1	chr12	-	5279	1	Intergenic	novelGene_6819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCAAGATTTCTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	99680533	99675254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_99675300_99680500
ES.8248.1	chr12	+	3264	1	Intergenic	novelGene_6820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTCTGTAACAACTATT	NA	False	NA	NA	False	NA	NA	NA	99708998	99712262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99709000_99712300
ES.8248.2	chr12	+	1828	2	Antisense	novelGene_ENSMUSG00000021176.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-25	NA	99708998	99712239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_99710487_99711899
ES.8249.1	chr12	+	4663	1	Intergenic	novelGene_6821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99728564	99733227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99728600_99733200
ES.825.1	chr1	+	177	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGAGATGGGGCATGA	NA	False	NA	NA	False	NA	NA	NA	77573057	77573234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_77573100_77573200
ES.8250.1	chr12	-	3536	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-31	-1437	30	1437	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGCTTGTTGTCA	NA	False	NA	NA	False	NA	NA	NA	99849732	99682353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ES.8250.2	chr12	-	2074	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-2	-4	-2	4	multi-exon	FALSE	canonical	3	69	junction_2	7.87400787401181	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATGGTATGTATGTG	NA	False	NA	-2	True	ATTAAA	-27	NA	99849703	99683786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ES.8250.5	chr12	-	706	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	-13	1375	-13	-185	multi-exon	FALSE	canonical	3	69	junction_2	7.87400787401181	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTGAATGCTGATATT	NA	False	NA	-15	True	AGTAAA	-12	NA	99849714	99685165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ES.8250.6	chr12	-	4717	5	ISM	ENSMUSG00000021176.7	ENSMUST00000223114.2	1122	7	991	131692	0	25222	internal_fragment	FALSE	canonical	3	69	junction_1	8.5146931829632	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTCAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	99849680	99816626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ES.8250.7	chr12	-	3994	5	ISM	ENSMUSG00000021176.7	ENSMUST00000223114.2	1122	7	1004	132402	13	24512	internal_fragment	FALSE	canonical	3	69	junction_1	8.5146931829632	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGCTGCTGTGATGACGT	NA	False	NA	NA	False	AATAAA	-30	NA	99849667	99817336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ES.8250.8	chr12	-	383	3	FSM	ENSMUSG00000021176.7	ENSMUST00000221801.2	3131	3	54	2694	-7	51	multi-exon	FALSE	canonical	3	83	junction_2	4.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTATGTCATTATTTT	NA	False	NA	NA	False	ATTAAA	-7	NA	99849708	99844542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_99844662_99849020_99849117_99849540
ES.8251.1	chr12	+	2100	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-60	-4	-40	4	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTGGAATGAAATT	NA	False	NA	23	True	ATTAAA	-23	NA	99850735	99921482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.10	chr12	+	2290	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-7	459	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGGGCACCGTTTTTAG	NA	False	NA	NA	False	ATTAAA	-20	NA	99850768	99886022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
ES.8251.11	chr12	+	3399	15	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-7	4	intron_retention	FALSE	canonical	3	362	junction_1	46.0682723171351	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTGGAATGAAATT	NA	False	NA	23	True	ATTAAA	-23	NA	99850768	99921482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.12	chr12	+	1847	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-6	17	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGGGATTGTTGTCCA	NA	False	NA	20	True	NA	NA	NA	99850769	99885580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
ES.8251.13	chr12	+	2199	11	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	-6	24258	-6	525	5prime_fragment	FALSE	canonical	3	362	junction_1	49.4125490133832	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACATAGGTAGTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	99850769	99879363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533
ES.8251.14	chr12	+	2371	18	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	192.386181693422	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGGCCTGGAATGAAAT	NA	False	NA	22	True	ATTAAA	-22	NA	99850773	99921481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99852736_99852980_99854144_99854212_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.15	chr12	+	1813	13	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	0	24	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	181.261991940457	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTGTCCACAGAGGT	NA	False	NA	27	True	NA	NA	NA	99850775	99885587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
ES.8251.16	chr12	+	2035	16	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	131.184585815391	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99850776	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872309_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.17	chr12	+	2044	16	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	131.555041290286	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99850776	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911602_99921221
ES.8251.19	chr12	+	2918	15	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	1	852	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	193.134985046676	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAAATCAGCTTACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	99850776	99886415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99852736_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
ES.8251.2	chr12	+	4241	14	NNC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-29	-4373	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_13	140.604443270672	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTCATCTCTTCGGGT	NA	False	NA	NA	False	AATAAA	-19	NA	99850746	99899248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99896623
ES.8251.20	chr12	+	5246	15	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_13	177.017640075669	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	19	True	ATTAAA	-19	NA	99850776	99921478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99881817_99901263_99901367_99909897_99910030_99911498_99911608_99921221
ES.8251.21	chr12	+	1982	9	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	2	-2090	intron_retention	FALSE	canonical	1	3	junction_1	205.612157653676	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCTTCAGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	99850777	99876748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99852736_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937
ES.8251.22	chr12	+	2292	17	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	153.9589915976	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99850777	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99852736_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.23	chr12	+	1303	9	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	2	26873	2	-2090	5prime_fragment	FALSE	canonical	3	362	junction_1	54.9181208709839	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTCTTCAGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	99850777	99876748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541
ES.8251.25	chr12	+	4264	14	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	8	0	intron_retention	FALSE	canonical	3	362	junction_1	48.7464154348961	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99850783	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.26	chr12	+	4867	11	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	10	21574	-7	3209	intron_retention	FALSE	canonical	3	362	junction_1	49.4125490133832	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACTGTAATAATAGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	99850785	99882047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533
ES.8251.27	chr12	+	1677	12	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	10	23037	-7	1746	5prime_fragment	FALSE	canonical	3	362	junction_1	47.3099503800065	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	AGTAAA	-23	NA	99850785	99880584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309
ES.8251.28	chr12	+	3453	16	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-7	-8334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	174.788507122815	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTATGTGCCATCTGTCC	NA	False	NA	NA	False	AATAAA	-34	NA	99850785	99913139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99909897_99910030_99911498
ES.8251.3	chr12	+	2045	15	ISM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	-49	9654	-29	8203	5prime_fragment	FALSE	canonical	3	362	junction_1	44.7195341511277	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCATGTGTGTATTGG	NA	False	NA	NA	False	NA	NA	NA	99850746	99911824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
ES.8251.30	chr12	+	1290	7	ISM	ENSMUSG00000021177.17	ENSMUST00000151019.8	3945	14	11	30863	-6	-6080	5prime_fragment	FALSE	canonical	3	362	junction_1	62.5604152444304	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTGGTTTGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	99850786	99872758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294
ES.8251.32	chr12	+	4198	16	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	1	4	intron_retention	FALSE	canonical	3	94	junction_1	106.266875783985	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTGGAATGAAATT	NA	False	NA	23	True	ATTAAA	-23	NA	99850805	99921482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.33	chr12	+	4209	15	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	2	8259	intron_retention	FALSE	canonical	3	94	junction_1	109.434912162436	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATTGACTTATTAGTT	NA	False	NA	NA	False	NA	NA	NA	99850806	99911880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99852980_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
ES.8251.34	chr12	+	3746	14	NIC	ENSMUSG00000021177.17	novel	2019	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_13	31.4211702651	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99857431	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.35	chr12	+	2431	14	ISM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	0	9202	0	8650	5prime_fragment	FALSE	canonical	3	455	junction_12	24.8643657950597	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTGATTGCCAATC	NA	False	NA	NA	False	AATAAA	-18	NA	99857431	99912271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498
ES.8251.36	chr12	+	2019	15	FSM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	30.3943469502243	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99857431	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.38	chr12	+	3844	4	NIC	ENSMUSG00000021177.17	novel	2019	15	NA	NA	1	8203	intron_retention	FALSE	canonical	3	455	junction_2	22.7303028283098	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTCATGTGTGTATTGG	NA	False	NA	NA	False	NA	NA	NA	99877907	99911824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99878040_99878533_99881817_99901263_99901367_99911498
ES.8251.39	chr12	+	3721	1	Intergenic	novelGene_6822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	4975	False	NA	NA	False	NA	NA	NA	99891637	99895358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_99891600_99895400
ES.8251.4	chr12	+	2089	16	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_14	130.857615581041	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99850758	99921473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911477_99911608_99921221
ES.8251.40	chr12	+	2967	1	Genic_Genomic	ENSMUSG00000021177.17	novel	NA	NA	NA	NA	21279	2349	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTGTTGCTAATAAC	NA	False	NA	NA	False	AATAAA	-15	NA	99903003	99905970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_99903000_99906000
ES.8251.5	chr12	+	5620	13	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-13	-2	intron_retention	FALSE	canonical	3	362	junction_1	48.9275967345855	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACAGGCCTGGAAT	NA	False	NA	17	True	ATTAAA	-17	NA	99850762	99921476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.6	chr12	+	2418	18	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-9	2	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	192.006163395884	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAGGCCTGGAATGAAA	NA	False	NA	21	True	ATTAAA	-21	NA	99850766	99921480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99852736_99852980_99854103_99854212_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.7	chr12	+	5123	14	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-7	1	intron_retention	FALSE	canonical	3	362	junction_1	47.3861138624202	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACAGGCCTGGAATGAA	NA	False	NA	20	True	ATTAAA	-20	NA	99850768	99921479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.8	chr12	+	5224	15	NNC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	1	junction_1	175.573825974565	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGTGTACAGGCCTG	NA	False	NA	13	True	ATTAAA	-13	NA	99850768	99921472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_99850812_99854103_99854212_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99881817_99901263_99901367_99911498_99911608_99921221
ES.8251.9	chr12	+	2682	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	-7	851	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCAAATCAGCTTACA	NA	False	NA	NA	False	ATTAAA	-16	NA	99850768	99886414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
ES.8252.1	chr12	-	2260	1	Antisense	novelGene_ENSMUSG00000021177.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACCCTCAAA	8453	False	NA	NA	False	NA	NA	NA	99866293	99864033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_99864000_99866300
ES.8253.1	chr12	+	1637	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	-46	0	-46	0	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	3927	False	NA	12	True	NA	NA	NA	100076366	100089664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.10	chr12	+	5386	8	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	19	-41	intron_retention	FALSE	canonical	3	1446	junction_1	346.899914990489	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAATGAGTACCAT	3992	False	NA	17	True	AATAAA	-23	NA	100076431	100089623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100087407_100089316
ES.8253.11	chr12	+	4288	9	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	26	41	26	-41	intron_retention	FALSE	canonical	3	1446	junction_1	325.00028846141	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAATGAGTACCAT	3999	False	NA	17	True	AATAAA	-23	NA	100076438	100089623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245
ES.8253.12	chr12	+	3795	10	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-29	-41	intron_retention	FALSE	canonical	3	1446	junction_1	313.40428668667	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAATGAGTACCAT	4005	False	NA	17	True	AATAAA	-23	NA	100076444	100089623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.13	chr12	+	4643	9	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-29	-44	intron_retention	FALSE	canonical	0	0	junction_4	811.860325117566	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCACTGTAATGAGTAC	4005	False	NA	14	True	AATAAA	-20	NA	100076444	100089620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081681_100081865_100082045_100082175_100082957_100085522_100086245_100087407_100089316
ES.8253.14	chr12	+	5430	8	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-28	-42	intron_retention	FALSE	canonical	3	1446	junction_1	352.68191137659	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCACTGTAATGAGTACCA	4006	False	NA	16	True	AATAAA	-22	NA	100076445	100089622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100085522_100086245_100087407_100089316
ES.8253.15	chr12	+	3094	9	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-27	-41	intron_retention	FALSE	canonical	3	1446	junction_1	325.16034506071	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAATGAGTACCAT	4007	False	NA	17	True	AATAAA	-23	NA	100076446	100089623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100087407_100089316
ES.8253.16	chr12	+	3353	1	NIC	ENSMUSG00000021178.10	novel	551	6	NA	NA	-27	-2014	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	647	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAGAGAGAGAG	4007	False	NA	NA	False	NA	NA	NA	100076446	100079799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076400_100079800
ES.8253.17	chr12	+	4506	9	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-26	-51	intron_retention	FALSE	canonical	3	1446	junction_1	326.645449991271	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTCTAGCACTGTAA	4008	False	NA	7	True	AATAAA	-13	NA	100076447	100089613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100086398_100087251_100087407_100089316
ES.8253.19	chr12	+	5107	8	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-26	-37	intron_retention	FALSE	canonical	3	1446	junction_1	350.760747577058	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAATGAGTACCATGATA	4008	False	NA	21	True	AATAAA	-27	NA	100076447	100089627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081865_100082045_100082175_100082957_100085522_100086245_100087407_100089316
ES.8253.21	chr12	+	1801	11	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-17	-38	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	716.578006918996	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAATGAGTACCATGAT	4017	False	NA	20	True	AATAAA	-26	NA	100076456	100089626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076763_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.22	chr12	+	2277	11	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	-6	-44	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	716.282493154761	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCACTGTAATGAGTAC	4028	False	NA	14	True	AATAAA	-20	NA	100076467	100089620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100077256_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.23	chr12	+	1536	10	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	2176	-2	2115	2	3prime_fragment	FALSE	canonical	3	2088	junction_7	130.11229717649	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAGAGTTCATTTTCT	6149	False	NA	14	True	NA	NA	NA	100078588	100089666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.25	chr12	+	1339	8	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	4683	44	4622	-44	3prime_fragment	FALSE	canonical	3	2088	junction_5	131.390833091233	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCACTGTAATGAGTAC	8656	False	NA	14	True	AATAAA	-20	NA	100081095	100089620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.26	chr12	+	892	5	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	6544	51	-3236	-51	3prime_fragment	FALSE	canonical	3	2088	junction_2	144.964650863581	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTCTAGCACTGTAA	NA	False	NA	7	True	AATAAA	-13	NA	100082956	100089613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8253.4	chr12	+	2271	10	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	3	-41	intron_retention	FALSE	canonical	3	1446	junction_1	308.913548176369	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAATGAGTACCAT	3976	False	NA	17	True	AATAAA	-23	NA	100076415	100089623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100086398_100087251_100087407_100089316
ES.8253.6	chr12	+	1560	11	NNC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	13	-54	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	734.210112978567	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGCTTTCTAGCACTG	3986	False	NA	4	True	AATAAA	-10	NA	100076425	100089610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100076471_100078589_100078644_100079278_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ES.8254.1	chr12	-	2891	1	Antisense	novelGene_ENSMUSG00000021178.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATATGTTCACCAGAA	NA	False	NA	NA	False	ACTAAA	-12	NA	100083928	100081037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_100081000_100083900
ES.8255.1	chr12	-	4277	17	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-21319	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	29.5920175047258	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGCTTCTTATTTC	NA	False	NA	-3	True	GATAAA	-17	NA	100147231	100091708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798_100125990_100144349_100144598_100146764_100146935_100147174
ES.8255.10	chr12	-	4217	15	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	286	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	26.4240343595889	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	8842	False	NA	-6	True	GATAAA	-14	NA	100125621	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100122226_100122340_100125125
ES.8255.11	chr12	-	3470	14	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	27.4146335043443	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	8566	False	NA	-6	True	GATAAA	-14	NA	100125897	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098425_100098576_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ES.8255.13	chr12	-	2777	13	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.3361605430047	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	8565	False	NA	-6	True	GATAAA	-14	NA	100125898	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095688_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ES.8255.14	chr12	-	4023	16	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-8893	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.7811275064521	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	NA	False	NA	-6	True	GATAAA	-14	NA	100134805	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125835_100125990_100130948_100131082_100134677
ES.8255.15	chr12	-	4058	17	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-9733	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.6790341867162	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	NA	False	NA	-6	True	GATAAA	-14	NA	100135645	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095688_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106327_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798_100125990_100130948_100131082_100132652_100132705_100135495
ES.8255.16	chr12	-	3653	14	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-167	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	25.4463119704881	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	8384	False	NA	-6	True	GATAAA	-14	NA	100126079	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098576_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
ES.8255.19	chr12	-	4635	13	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	5	-2	intron_retention	FALSE	canonical	2	41	junction_4	13.6165238670603	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGTGTGCAGCTTCTTA	8561	False	NA	-7	True	GATAAA	-13	NA	100125902	100091712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100091991_100092459_100092532_100095553_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ES.8255.2	chr12	-	3839	15	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	26.2662971761712	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGCAGCTTCTTATTT	8549	False	NA	-4	True	GATAAA	-16	NA	100125914	100091709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100122226_100122340_100125798
ES.8255.20	chr12	-	3619	14	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	271	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	25.4176940653088	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGTGCAGCTTCTT	8827	False	NA	-8	True	GATAAA	-12	NA	100125636	100091713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125608
ES.8255.22	chr12	-	4171	13	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	2	-3	intron_retention	FALSE	canonical	1	4	junction_3	22.8156866115301	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGTGCAGCTTCTT	8553	False	NA	-8	True	GATAAA	-12	NA	100125910	100091713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100092532_100095553_100095693_100096616_100097543_100098425_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ES.8255.23	chr12	-	3557	13	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	21.4747914231237	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGTGCAGCTTCTT	8555	False	NA	-8	True	GATAAA	-12	NA	100125908	100091713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100116075_100116310_100117469_100117594_100125798
ES.8255.24	chr12	-	3917	15	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1535	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	22.0046377300935	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGTGCAGCTTCTT	7016	False	NA	-8	True	GATAAA	-12	NA	100127447	100091713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798_100125990_100127327
ES.8255.26	chr12	-	4052	16	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-9741	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.7354301526214	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACATGTGTGCAGCTTCT	NA	False	NA	-9	True	GATAAA	-11	NA	100135653	100091714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100122226_100122340_100125798_100125990_100135495
ES.8255.27	chr12	-	4774	8	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-14286	-4	intron_retention	FALSE	canonical	0	0	junction_4	25.1379865412276	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACATGTGTGCAGCTTCT	NA	False	NA	-9	True	GATAAA	-11	NA	100110317	100091714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100098797_100100615_100100818_100103916_100104038_100106263_100106398_100108151_100108558_100109997
ES.8255.28	chr12	-	3475	1	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	1	-12102	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAGCAATCTGATGAA	8557	False	NA	NA	False	NA	NA	NA	100125906	100122431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100122400_100125900
ES.8255.29	chr12	-	1038	5	Intergenic	novelGene_6823	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	4.33012701892219	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGTATTTTGGATTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	100147231	100141013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100141324_100144375_100144598_100145597_100145778_100146764_100146935_100147075
ES.8255.30	chr12	-	3046	2	Intergenic	novelGene_6824	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCTTCTGCTCTTTAAC	NA	False	NA	NA	False	ATTAAA	-16	NA	100147234	100144047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100146935_100147075
ES.8255.31	chr12	-	2855	2	Intergenic	novelGene_6825	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTCGGCTCCGGAGTCTG	NA	False	NA	NA	False	AATAAA	-25	NA	100147215	100144219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100146935_100147075
ES.8255.32	chr12	-	1223	2	Intergenic	novelGene_6826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTCTCAATTATTC	NA	False	NA	NA	False	AAAAAG	-40	NA	100147212	100145848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100146935_100147075
ES.8255.4	chr12	-	3832	14	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.6334845333632	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8572	False	NA	-5	True	GATAAA	-15	NA	100125891	100091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100092126_100092459_100092532_100095553_100095688_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ES.8255.5	chr12	-	3704	14	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_12	19.2473774437334	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8555	False	NA	-5	True	GATAAA	-15	NA	100125908	100091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
ES.8255.6	chr12	-	4587	13	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	40	0	intron_retention	FALSE	canonical	2	17	junction_11	19.6488266542531	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8596	False	NA	-5	True	GATAAA	-15	NA	100125867	100091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100091991_100092459_100092532_100095553_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
ES.8255.7	chr12	-	6777	12	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	6571	0	intron_retention	FALSE	canonical	2	17	junction_11	20.0832976120757	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	NA	False	NA	-5	True	GATAAA	-15	NA	100119336	100091710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100110449_100112128_100112288_100116075_100116310_100117484
ES.8255.9	chr12	-	4842	14	NNC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	29.9790854118363	126	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	8583	False	NA	-6	True	GATAAA	-14	NA	100125880	100091711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098425_100098797_100100615_100100792_100103916_100104038_100106263_100107581_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
ES.8256.1	chr12	-	666	1	Antisense	novelGene_ENSMUSG00000113335.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGCCTCTTTTCTGTGG	5907	False	NA	NA	False	AATAAA	-15	NA	100153729	100153063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_100153100_100153700
ES.8257.1	chr12	+	1957	3	FSM	ENSMUSG00000072884.11	ENSMUST00000146364.8	1984	3	25	2	25	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	100154251	100159797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100154607_100155149_100155252_100158297
ES.8258.1	chr12	+	3463	5	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-47	820	intron_retention	FALSE	canonical	3	3420	junction_4	231.739481961965	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9212	False	NA	30	True	AATAAA	-19	NA	100165740	100173574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100165976_100168651_100168683_100169833_100171979_100172356_100172493_100172658
ES.8258.10	chr12	+	1034	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	2989	-2	330	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGCTTCTAGTTCAATC	9257	False	NA	17	True	ATTAAA	-34	NA	100165785	100173084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.11	chr12	+	1471	7	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1392.18023458012	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9257	False	NA	26	True	AATAAA	-15	NA	100165785	100173570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165875_100165923_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.12	chr12	+	3796	4	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	820	intron_retention	FALSE	canonical	3	3420	junction_3	248.668900794253	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9257	False	NA	30	True	AATAAA	-19	NA	100165785	100173574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100165976_100168651_100168683_100169833_100172493_100172658
ES.8258.13	chr12	+	1509	6	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1461.96068346587	1045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTGGTGTTAAATGC	9257	False	NA	24	True	AATAAA	-13	NA	100165785	100173568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165967_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.15	chr12	+	4578	4	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	820	intron_retention	FALSE	canonical	3	3420	junction_3	207.255612442435	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGTTAAATGCTTTGTA	9257	False	NA	30	True	AATAAA	-19	NA	100165785	100173574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100168683_100169833_100169978_100171871_100172493_100172658
ES.8258.16	chr12	+	4024	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGTGAACTGTGTAGG	9257	False	NA	26	True	AATAAA	-23	NA	100165785	100176072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165976_100169800_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.17	chr12	+	1294	7	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-1	814	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	1392.18023458012	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTGGTGTTAAATGC	9258	False	NA	24	True	AATAAA	-13	NA	100165786	100173568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658_100173201_100173423
ES.8258.19	chr12	+	1394	5	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	0	828	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	1666.1279962836	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTTGTAAAGCTGAG	9259	False	NA	38	True	AATAAA	-27	NA	100165787	100173582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172658
ES.8258.2	chr12	+	4061	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	57	-3	-37	3	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAACTGTGTAGGTTTT	9222	False	NA	30	True	AATAAA	-27	NA	100165750	100176076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.22	chr12	+	1489	6	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	5	816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1502.86220259876	1045	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9264	False	NA	26	True	AATAAA	-15	NA	100165792	100173570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165976_100168651_100168683_100169833_100169978_100171895_100171979_100172356_100172493_100172658
ES.8258.23	chr12	+	2615	5	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	5	24	intron_retention	FALSE	canonical	3	3420	junction_4	231.739481961965	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTTCTTCATTCTGTT	9264	False	NA	8	True	NA	NA	NA	100165792	100172778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100165976_100168651_100168683_100169833_100171979_100172356_100172493_100172658
ES.8258.24	chr12	+	5716	3	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	5	814	intron_retention	FALSE	canonical	3	3420	junction_2	96	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTGGTGTTAAATGC	9264	False	NA	24	True	AATAAA	-13	NA	100165792	100173568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100169978_100171871_100172493_100172658
ES.8258.26	chr12	+	2477	4	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	2253	816	intron_retention	FALSE	canonical	3	3420	junction_3	82.8613299434664	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	NA	False	NA	26	True	AATAAA	-15	NA	100168655	100173570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.27	chr12	+	888	2	NIC	ENSMUSG00000001175.17	novel	549	3	NA	NA	63	24	intron_retention	FALSE	canonical	3	3420	junction_1	0	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTTCTTCATTCTGTT	NA	False	NA	8	True	NA	NA	NA	100171724	100172778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100172493_100172658
ES.8258.3	chr12	+	1566	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	57	2492	-37	827	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCTTTGTAAAGCTGA	9222	False	NA	37	True	AATAAA	-26	NA	100165750	100173581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.4	chr12	+	759	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	73	3283	-21	36	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTTGTATCTAGCGA	9238	False	NA	20	True	NA	NA	NA	100165766	100172790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.5	chr12	+	1016	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-3	309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAATTCAAAATCT	9256	False	NA	-4	True	ATTAAA	-13	NA	100165784	100173063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165976_100169800_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.6	chr12	+	1523	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-3	816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9256	False	NA	26	True	AATAAA	-15	NA	100165784	100173570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165976_100169800_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.8	chr12	+	1493	5	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-2	816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1532.38105166437	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9257	False	NA	26	True	AATAAA	-15	NA	100165785	100173570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100165980_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8258.9	chr12	+	878	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	92	3145	-2	174	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGAAGCACTTAGTGGA	9257	False	NA	NA	False	TATAAA	-16	NA	100165785	100172928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ES.8259.1	chr12	+	111	1	Intergenic	novelGene_6827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGCTTTGAAATCATTG	NA	False	NA	NA	False	NA	NA	NA	100183544	100183655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100183500_100183700
ES.826.1	chr1	+	173	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTTTGTCTCCTAAAG	NA	False	NA	NA	False	NA	NA	NA	78225176	78225349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78225200_78225300
ES.8260.1	chr12	+	1170	3	ISM	ENSMUSG00000113679.2	ENSMUST00000223300.2	4791	4	13653	3500	6	15	3prime_fragment	FALSE	canonical	2	9	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTTTATTTTTATTTA	NA	False	NA	NA	False	AAAACA	-30	NA	100256520	100263667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100256684_100261887_100261990_100262762
ES.8260.2	chr12	+	1224	4	NNC	ENSMUSG00000113679.2	novel	1230	4	NA	NA	-1	-23	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCCTAGTC	NA	False	NA	NA	False	NA	NA	NA	100256542	100268551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100256684_100261887_100261990_100267215_100267355_100267709
ES.8260.3	chr12	+	1168	3	NNC	ENSMUSG00000113679.2	novel	4791	4	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCACTGGTCTGAGC	NA	False	NA	NA	False	AAAACA	-7	NA	100256551	100263644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100256684_100261887_100261990_100262710
ES.8260.4	chr12	+	6133	2	ISM	ENSMUSG00000113679.2	ENSMUST00000223300.2	4791	4	13877	3517	201	-2	3prime_fragment	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTCTGAGCTCTGCT	NA	False	NA	NA	False	AAAACA	-13	NA	100256744	100263650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_100261990_100262762
ES.8260.5	chr12	+	3258	1	Genic_Genomic	ENSMUSG00000113679.2	novel	NA	NA	NA	NA	7368	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGTTAAACTTAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	100263911	100267169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_100263900_100267200
ES.8261.1	chr12	+	3217	1	Antisense	novelGene_ENSMUSG00000033530.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCCTGAAGTCCCATGA	NA	False	NA	NA	False	NA	NA	NA	100319559	100322776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_100319600_100322800
ES.8262.1	chr12	+	176	1	Intergenic	novelGene_6829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTTAAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	100423217	100423393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100423200_100423400
ES.8263.1	chr12	+	3561	1	Intergenic	novelGene_6830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100439480	100443041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100439500_100443000
ES.8264.1	chr12	-	3915	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-468	-1	-468	1	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTTTTGTCTTTCAC	NA	False	NA	0	True	AATAAA	-22	NA	100487553	100267027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.11	chr12	-	3786	20	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-52	-2	intron_retention	FALSE	canonical	0	0	junction_8	54.0132332200257	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCTGGCTTTTGTCTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100487137	100267030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350115_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.13	chr12	-	2947	16	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-10	-4	intron_retention	FALSE	canonical	0	0	junction_13	59.7853939799123	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCCCTGGCTTTTGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	100487095	100267032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100461530_100461700_100466334_100466490_100486829
ES.8264.14	chr12	-	3569	21	NNC	ENSMUSG00000033530.9	novel	3307	21	NA	NA	-10	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	70.055888403474	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCCCTGGCTTTTGTCT	NA	False	NA	-5	True	AATAAA	-17	NA	100487095	100267032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100302064_100302182_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.15	chr12	-	3688	21	NNC	ENSMUSG00000033530.9	novel	3307	21	NA	NA	-7	-7	intron_retention	FALSE	non_canonical	0	0	junction_3	69.9092983801154	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGACCCCTGGCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	100487092	100267035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100312473_100312716_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.16	chr12	-	3501	20	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-40	-7	intron_retention	FALSE	canonical	0	0	junction_5	72.5283018595991	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGACCCCTGGCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	100487125	100267035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339798_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373341_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.17	chr12	-	3442	20	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-27	-7	intron_retention	FALSE	canonical	1	3	junction_3	52.4868008734384	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGACCCCTGGCTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	100487112	100267035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298955_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.18	chr12	-	3366	19	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-7	-8	intron_retention	FALSE	canonical	2	7	junction_14	53.9332291808727	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGACCCCTGGCTTTT	NA	False	NA	-9	True	AATAAA	-13	NA	100487092	100267036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.19	chr12	-	3311	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-15	150	-15	-95	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTTATGTGAATTCA	NA	False	NA	NA	False	AATATA	-41	NA	100487100	100267178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.2	chr12	-	3666	21	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-17	0	intron_retention	FALSE	canonical	0	0	junction_3	69.9092983801154	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100486967	100267028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100312377_100312716_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.20	chr12	-	3018	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	-65	493	-65	-20	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCAGCGAATGTAGAAG	NA	False	NA	NA	False	AGTAAA	-13	NA	100487150	100267521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.21	chr12	-	2667	19	NNC	ENSMUSG00000033530.9	novel	730	8	NA	NA	12	-28703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.2407748848307	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGTCTCTTTGCCA	NA	False	NA	NA	False	NA	NA	NA	100487069	100296623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100297065_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.22	chr12	-	1276	1	Intergenic	novelGene_6828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGTTTCTAAAGGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	100311595	100310319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100310300_100311600
ES.8264.23	chr12	-	1025	5	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	9654	37754	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	102.563395029611	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGAGGTGTCTGGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	100342505	100312137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100312716_100314194_100314293_100321261_100321379_100339802_100339964_100342434
ES.8264.24	chr12	-	2177	13	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.3032042021358	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAATCTTACTTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	100487095	100349891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100431840_100431900_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.25	chr12	-	1967	12	ISM	ENSMUSG00000033530.9	ENSMUST00000223020.2	3307	21	6	82808	6	0	5prime_fragment	FALSE	canonical	3	208	junction_2	15.6152076753337	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAATCTTACTTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	100486944	100349891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.26	chr12	-	2476	10	FSM	ENSMUSG00000033530.9	ENSMUST00000223444.2	3348	10	-30	902	0	-902	multi-exon	FALSE	canonical	0	0	junction_1	73.3560570853635	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTGTACAACTGTCAT	NA	False	NA	NA	False	NA	NA	NA	100487081	100363732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100364926_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.27	chr12	-	5662	7	ISM	ENSMUSG00000033530.9	ENSMUST00000223444.2	3348	10	6	13946	6	-13946	5prime_fragment	FALSE	canonical	3	211	junction_3	14.290634073484	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTTTGTTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	100487045	100376776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.28	chr12	-	5300	7	ISM	ENSMUSG00000033530.9	ENSMUST00000223444.2	3348	10	-77	14391	-43	-14391	5prime_fragment	FALSE	canonical	3	211	junction_3	14.290634073484	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATAGAGCCTCTTTAGC	NA	False	NA	NA	False	NA	NA	NA	100487128	100377221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.29	chr12	-	5961	2	Intergenic	novelGene_6831	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATATCCCACATTTT	NA	False	NA	NA	False	NA	NA	NA	100474105	100468075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100469445_100469513
ES.8264.30	chr12	-	176	1	Intergenic	novelGene_6832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGTTGGAAACTT	NA	False	NA	NA	False	NA	NA	NA	100472771	100472595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100472600_100472800
ES.8264.31	chr12	-	5827	1	Genic_Genomic	ENSMUSG00000033530.9	novel	NA	NA	NA	NA	-337	-15543	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAACCAAGTGAGTTCC	NA	False	NA	NA	False	NA	NA	NA	100487422	100481595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_100481600_100487400
ES.8264.4	chr12	-	3443	19	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-119	0	intron_retention	FALSE	canonical	3	7	junction_15	53.9158294628458	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100487204	100267028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.5	chr12	-	3303	19	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	1	-1	intron_retention	FALSE	canonical	1	2	junction_2	54.0981332828718	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCTTTTGTCTTTC	NA	False	NA	-2	True	AATAAA	-20	NA	100487084	100267029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100268030_100291802_100292006_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8264.7	chr12	-	8026	1	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	24113	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCTTTTGTCTTTC	NA	False	NA	-2	True	AATAAA	-20	NA	100275055	100267029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100267000_100275100
ES.8264.8	chr12	-	3319	19	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-10	-2	intron_retention	FALSE	canonical	0	0	junction_16	71.9453667894545	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCTGGCTTTTGTCTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100487095	100267030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100461530_100461696_100466334_100466490_100486829
ES.8264.9	chr12	-	3600	20	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-89	-2	intron_retention	FALSE	canonical	1	2	junction_8	53.585047734608	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCCTGGCTTTTGTCTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100487174	100267030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350338_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ES.8265.1	chr12	+	174	1	Intergenic	novelGene_6833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCCATTAGT	NA	False	NA	NA	False	NA	NA	NA	100568882	100569056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100568900_100569100
ES.8266.1	chr12	+	2565	1	Intergenic	novelGene_6836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCACCAAAATCATAGGCC	NA	False	NA	NA	False	NA	NA	NA	100666227	100668792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100666200_100668800
ES.8267.1	chr12	-	5660	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	2	-20	2	20	multi-exon	TRUE	canonical	3	13	junction_6	9.17196816392207	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATAATTTATTGT	NA	False	NA	16	True	AATAAA	-39	NA	100691377	100514677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.10	chr12	-	4326	18	NNC	ENSMUSG00000021180.10	novel	4406	18	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	13.1412343987348	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTTGGGTCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	100691374	100516040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100560776_100560824_100562073_100562178_100564148_100564233_100582255_100582364_100620305_100620407_100620529_100620749_100644776_100644849_100691039
ES.8267.11	chr12	-	3964	15	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	36	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	10.0511447210794	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATCCTGTTCACTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	100691343	100516151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100620529_100620749_100691039
ES.8267.12	chr12	-	4215	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	-28	1455	-28	-2	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTATCCTGTTCACTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	100691407	100516152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.13	chr12	-	4718	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	84	19469	-8	-13549	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGAGTACTGTCTTTA	NA	False	NA	NA	False	NA	NA	NA	100691295	100534166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.14	chr12	-	2724	13	ISM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	15	21532	15	-15612	5prime_fragment	FALSE	canonical	3	13	junction_2	8.96133670584671	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAATTTTTTTAATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	100691364	100536229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.15	chr12	-	1229	8	NIC	ENSMUSG00000021180.10	novel	1039	8	NA	NA	15	20	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	9.9979589753844	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTGTTTCAAGATTACA	NA	False	NA	NA	False	NA	NA	NA	100691364	100560622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100560824_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.16	chr12	-	1165	7	NIC	ENSMUSG00000021180.10	novel	1039	8	NA	NA	-9	16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.5906600230371	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAGACTGTTTCAAGAT	NA	False	NA	NA	False	NA	NA	NA	100691388	100560626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100560824_100562073_100562178_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.17	chr12	-	6259	1	Intergenic	novelGene_6834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACACTCTCTACTCTT	NA	False	NA	NA	False	NA	NA	NA	100609895	100603636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100603600_100609900
ES.8267.18	chr12	-	3040	1	Intergenic	novelGene_6835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGATATAGGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	100664140	100661100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100661100_100664100
ES.8267.2	chr12	-	5452	16	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	2	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	11.4686044874208	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAGTATTTTATAAAA	NA	False	NA	0	True	AATAAA	-23	NA	100691377	100514693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.3	chr12	-	5517	16	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_15	9.65539572812356	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACTCAAGTATTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	100691326	100514697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100691039
ES.8267.4	chr12	-	5432	15	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	10.0511447210794	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACTCAAGTATTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	100691357	100514697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100620529_100620749_100691039
ES.8267.5	chr12	-	4241	16	NIC	ENSMUSG00000021180.10	novel	4406	18	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_15	9.65539572812356	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGGTCATTTCTAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	100691389	100516036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100691039
ES.8267.6	chr12	-	4351	18	NNC	ENSMUSG00000021180.10	novel	4406	18	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	11.8333292720561	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGGTCATTTCTAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	100691363	100516036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100618199_100618264_100620529_100620749_100644776_100644849_100691039
ES.8267.7	chr12	-	4313	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	-10	1339	-10	0	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGGTCATTTCTAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	100691389	100516036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ES.8267.8	chr12	-	4067	18	NNC	ENSMUSG00000021180.10	novel	4406	18	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	11.1420522669625	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTTGGGTCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	100691369	100516040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039_100691106_100691327
ES.8267.9	chr12	-	3736	13	NIC	ENSMUSG00000021180.10	novel	5642	17	NA	NA	-20	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	10.6624340560681	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTTTGGGTCATTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	100691307	100516040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100582255_100582364_100691039
ES.8268.1	chr12	-	479	1	FSM	ENSMUSG00000113113.2	ENSMUST00000223227.2	403	1	-33	-43	-33	43	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGAGTAT	NA	False	NA	NA	False	AATAAA	-13	NA	100711227	100710748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100710700_100711200
ES.8269.1	chr12	+	2993	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	40	262	2	0	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATCTTTAGTATGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	100745355	100838607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ES.8269.2	chr12	+	5762	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	75	-2542	-4	-247	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTTGTCATTTTCAC	NA	False	NA	NA	False	AATAAA	-14	NA	100745390	100841411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ES.8269.3	chr12	+	2566	15	NIC	ENSMUSG00000021185.17	novel	2424	14	NA	NA	9	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	5.3946307395712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGTTGGTTGTTTG	NA	False	NA	NA	False	CATAAA	-17	NA	100745403	100863238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562_100837766_100861719_100861811_100862866
ES.8269.4	chr12	+	3680	9	NNC	ENSMUSG00000021185.17	novel	3295	13	NA	NA	-8916	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.27633560552029	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTCCAGTGTCTGCTA	NA	False	NA	NA	False	AATAAA	-30	NA	100807678	100838622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_100807781_100808901_100810437_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ES.827.1	chr1	+	4195	7	NNC	ENSMUSG00000032908.10	novel	4002	5	NA	NA	-886	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.3870669054836	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTTTCTGTGGAT	NA	False	NA	NA	False	AATAAA	-42	NA	78286095	78396924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78286114_78286678_78286810_78336707_78336867_78367111_78367292_78369995_78370086_78393169_78393374_78393511
ES.827.2	chr1	+	4089	5	FSM	ENSMUSG00000032908.10	ENSMUST00000036172.10	4002	5	-88	1	-88	-1	multi-exon	FALSE	canonical	2	4	junction_1	2.12132034355964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGTTTCTGTGGATT	NA	False	NA	NA	False	AATAAA	-43	NA	78286893	78396925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78287140_78336707_78336867_78367111_78367292_78369995_78370086_78393511
ES.827.3	chr1	+	3835	4	NIC	ENSMUSG00000032908.10	novel	4002	5	NA	NA	6	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTTTCTGTGGAT	NA	False	NA	NA	False	AATAAA	-42	NA	78286987	78396924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78287140_78367111_78367292_78369995_78370086_78393511
ES.8270.1	chr12	-	190	1	Intergenic	novelGene_6837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTACCTCATGATTT	NA	False	NA	NA	False	NA	NA	NA	100760199	100760009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100760000_100760200
ES.8271.1	chr12	-	185	1	Intergenic	novelGene_6838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAAGAGCTCTCT	NA	False	NA	NA	False	NA	NA	NA	100796631	100796446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100796400_100796600
ES.8272.2	chr12	-	3024	4	NIC	ENSMUSG00000047415.13	novel	2900	3	NA	NA	-28	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.816496580927726	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGAGTGTGTGCAGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	100874485	100842942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100845672_100854242_100854332_100865501_100865580_100874357
ES.8272.3	chr12	-	3196	3	NIC	ENSMUSG00000047415.13	novel	3223	3	NA	NA	85	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGCAGAGTGTGTGCAG	NA	False	NA	NA	False	AATAAA	-14	NA	100865579	100842945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100845672_100853939_100854332_100865501
ES.8272.4	chr12	-	2918	3	FSM	ENSMUSG00000047415.13	ENSMUST00000110065.8	2900	3	-20	2	-3	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGCAGAGTGTGTGCAG	NA	False	NA	NA	False	AATAAA	-14	NA	100874460	100842945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100845672_100854242_100854332_100874357
ES.8272.5	chr12	-	177	1	Intergenic	novelGene_6839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	100851214	100851037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_100851000_100851200
ES.8273.1	chr12	+	180	1	Intergenic	novelGene_6840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACACTC	NA	False	NA	NA	False	NA	NA	NA	100882634	100882814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100882600_100882800
ES.8274.1	chr12	+	8494	4	Antisense	novelGene_ENSMUSG00000080575.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCGGGAGACAAAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	100942053	100995139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_100950228_100988551_100988662_100994494_100994592_100995026
ES.8274.2	chr12	+	1889	1	Intergenic	novelGene_6841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAT	NA	False	NA	NA	False	NA	NA	NA	100964601	100966490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100964600_100966500
ES.8275.1	chr12	-	7409	29	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	5	61	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	27.0922460478707	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCATAGTTGTCTGAGT	NA	False	NA	58	True	AGTAAA	-37	NA	100995310	100877720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.13	chr12	-	3012	5	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	487	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.8450272143414	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCCCTGGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	100888386	100877782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888087
ES.8275.14	chr12	-	7376	28	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	11744	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	28.3337448529786	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCCCTGGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	100983424	100877782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100983094
ES.8275.15	chr12	-	3152	5	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	488	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.8450272143414	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCCCTGGTTTTCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	100888385	100877782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100887946
ES.8275.16	chr12	-	8633	30	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.9666714557714	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGCCCTGGTTTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	100995156	100877783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100890460_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920562_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.17	chr12	-	4654	19	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	38.2466411016125	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGCCCTGGTTTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	100995323	100877783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889528_100913396_100913497_100914705_100914884_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.18	chr12	-	9416	16	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-737	-2	intron_retention	FALSE	canonical	0	0	junction_12	39.929716029822	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGCCCTGGTTTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	100912169	100877783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100905849_100906530_100907367_100907495_100908255_100908384_100911105
ES.8275.19	chr12	-	8241	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	42	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	28.462372822143	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGCCCTGGTTTTCTT	NA	False	NA	-5	True	AATAAA	-15	NA	100995126	100877783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100891019_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.2	chr12	-	7571	30	FSM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	-25	-4	-25	4	multi-exon	FALSE	canonical	3	67	junction_4	21.6322633049711	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTTTTCTTCAGTAA	NA	False	NA	1	True	AATAAA	-21	NA	100995340	100877777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.21	chr12	-	7103	28	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	12779	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_27	28.0981524808929	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100982389	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100982330
ES.8275.22	chr12	-	9516	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	56	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	31.4540405459564	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100995112	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100940623_100942804_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.23	chr12	-	7678	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-70	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	31.4540405459564	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100995385	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100942702_100942772_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.25	chr12	-	10438	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	58	-3	intron_retention	FALSE	non_canonical	0	0	junction_5	29.2810898400695	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100995110	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100889078_100889243_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.27	chr12	-	7809	31	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	22	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	28.462372822143	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100995146	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100891470_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.28	chr12	-	8095	29	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	45	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	28.7530610615316	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGAGCCCTGGTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	100995123	100877784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100889657_100896803_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.30	chr12	-	5486	30	NNC	ENSMUSG00000021182.17	novel	705	4	NA	NA	20	-3226	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.0794858936749	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCTTGTGCTAGTTT	NA	False	NA	NA	False	AGTAAA	-12	NA	100995295	100882184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100882428_100882832_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.31	chr12	-	7948	26	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-14	824	intron_retention	FALSE	canonical	3	38	junction_1	15.3067828102446	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAACCAGCTGAGTATGA	NA	False	NA	NA	False	NA	NA	NA	100995329	100888614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.33	chr12	-	3851	20	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	36	-603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	27.2799176284895	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGAAGTTGGGTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	100995206	100904907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100940623_100940681_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.34	chr12	-	1934	12	ISM	ENSMUSG00000021182.17	ENSMUST00000085096.10	6313	30	-81	40228	-8	-14882	5prime_fragment	FALSE	canonical	3	72	junction_4	5.19376612984935	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCGCTGTTCATTTACA	NA	False	NA	NA	False	TATAAA	-16	NA	100995323	100919186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.4	chr12	-	2216	9	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	6072	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.0287720022617	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGTTTTCTTCAGTA	2845	False	NA	0	True	AATAAA	-20	NA	100905360	100877778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100877894_100890997_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255
ES.8275.5	chr12	-	10800	30	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	13	1	intron_retention	FALSE	canonical	3	38	junction_5	24.7293554827487	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGGTTTTCTTCAG	NA	False	NA	-2	True	AATAAA	-18	NA	100995302	100877780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.6	chr12	-	7758	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-53	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	31.2638236091919	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGGTTTTCTTCAG	NA	False	NA	-2	True	AATAAA	-18	NA	100995368	100877780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100950791_100950954_100988552_100988662_100994494_100994596_100995030
ES.8275.7	chr12	-	6417	19	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	-4147	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	33.3685462156086	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGGTTTTCTTCAG	8013	False	NA	-2	True	AATAAA	-18	NA	100915579	100877780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100915138
ES.8275.8	chr12	-	10642	31	NNC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	11	1	intron_retention	FALSE	non_canonical	0	0	junction_5	29.2810898400695	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTGGTTTTCTTCAG	NA	False	NA	-2	True	AATAAA	-18	NA	100995304	100877780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100889084_100889243_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ES.8275.9	chr12	-	4110	4	ISM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	106065	0	-104	0	3prime_fragment	FALSE	canonical	3	124	junction_3	15.06283137026	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	100889250	100877781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785
ES.8276.1	chr12	+	165	1	Intergenic	novelGene_6842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCCTTCTAGCTA	3618	False	NA	NA	False	NA	NA	NA	100996589	100996754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_100996600_100996800
ES.8277.1	chr12	+	1549	1	Intergenic	novelGene_6843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8546	False	NA	NA	False	NA	NA	NA	101001517	101003066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101001500_101003100
ES.8278.1	chr12	+	210	1	Intergenic	novelGene_6844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTAGTTTCATAAAAC	NA	False	NA	NA	False	NA	NA	NA	101003313	101003523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101003300_101003500
ES.8279.1	chr12	+	2207	1	Antisense	novelGene_ENSMUSG00000041846.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAACTAAAAGGACATGA	NA	False	NA	NA	False	NA	NA	NA	101017871	101020078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_101017900_101020100
ES.828.1	chr1	+	8468	1	FSM	ENSMUSG00000101798.2	ENSMUST00000186625.2	261	1	-353	-7854	-353	7854	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGACAGAGTATAGCTCA	NA	False	NA	NA	False	NA	NA	NA	78409635	78418103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78409600_78418100
ES.8280.1	chr12	+	2775	1	Intergenic	novelGene_6845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCATTACAGAGACCAAAG	NA	False	NA	NA	False	NA	NA	NA	101043102	101045877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101043100_101045900
ES.8281.1	chr12	+	3031	1	FSM	ENSMUSG00000097121.3	ENSMUST00000222895.2	2557	1	-2038	1564	-2038	-1564	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCCGCCATCTTGGCTCG	NA	False	NA	NA	False	NA	NA	NA	101046671	101049702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101046700_101049700
ES.8281.2	chr12	+	1761	1	FSM	ENSMUSG00000097121.3	ENSMUST00000222895.2	2557	1	28	768	-2	-768	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATGAAATTCTTTGT	NA	False	NA	NA	False	GATAAA	-15	NA	101048737	101050498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101048700_101050500
ES.8281.3	chr12	+	3304	2	NNC	ENSMUSG00000097121.3	novel	2431	2	NA	NA	46	987	intron_retention	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATAGATCATTAACTT	NA	False	NA	NA	False	AATAAA	-23	NA	101048785	101052253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101052033_101052196
ES.8281.4	chr12	+	558	3	NNC	ENSMUSG00000097121.3	novel	706	3	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTGTTTGGTTTAG	NA	False	NA	NA	False	AATAAA	-11	NA	101050077	101054436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101050284_101050542_101050759_101054300
ES.8282.1	chr12	-	4626	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	-19	-524	-14	18	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTATTTTTGGGTCT	8758	False	NA	97	True	AATAAA	-31	NA	101049975	101005649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.10	chr12	-	4560	16	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	252.411216514287	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATGTTTCTTTTCTT	8813	False	NA	-17	True	AATAAA	-32	NA	101049920	101005763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017873_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031246_101031342_101034895_101034952_101048987
ES.8282.11	chr12	-	4471	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-53	98	-14	5	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTATGTTTCTTTTC	8758	False	NA	-19	True	AATAAA	-30	NA	101049975	101005765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.12	chr12	-	4506	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	-16	-407	-11	4	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTATGTTTCTTTT	8761	False	NA	-20	True	AATAAA	-29	NA	101049972	101005766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.13	chr12	-	4517	15	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	190.533729404576	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTGTATGTTTCTTTT	8777	False	NA	-20	True	AATAAA	-29	NA	101049956	101005766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008686_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.15	chr12	-	4605	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	1	3	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTGTATGTTTCTTT	8778	False	NA	-21	True	AATAAA	-28	NA	101049955	101005767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.16	chr12	-	4450	15	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	15	3	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	188.229993922979	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAATTGTATGTTTCTTT	8792	False	NA	-21	True	AATAAA	-28	NA	101049941	101005767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.17	chr12	-	4190	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	197	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	161.445084490431	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATTGTATGTTTCTT	9008	False	NA	-22	True	AATAAA	-27	NA	101049725	101005768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017894_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.18	chr12	-	4847	17	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	253.156811272677	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATTGTATGTTTCTT	8793	False	NA	-22	True	AATAAA	-27	NA	101049940	101005768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010445_101010665_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.19	chr12	-	6255	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	2	0	intron_retention	FALSE	canonical	3	490	junction_9	62.0944117963232	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8774	False	NA	-24	True	AATAAA	-25	NA	101049959	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.2	chr12	-	4554	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-33	-5	1	5	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTACCTTATTAAAACAT	8778	False	NA	84	True	AATAAA	-18	NA	101049955	101005662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.20	chr12	-	6419	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-6	0	intron_retention	FALSE	canonical	3	56	junction_5	192.746171777013	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8766	False	NA	-24	True	AATAAA	-25	NA	101049967	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.22	chr12	-	4648	16	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	206.879825556341	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8771	False	NA	-24	True	AATAAA	-25	NA	101049962	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.23	chr12	-	6671	13	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-11	0	intron_retention	FALSE	canonical	3	490	junction_8	59.5956281021426	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8761	False	NA	-24	True	AATAAA	-25	NA	101049972	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.24	chr12	-	4092	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	224	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	245.700051498005	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	9035	False	NA	-24	True	AATAAA	-25	NA	101049698	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010445_101010568_101015918_101016078_101017592_101017696_101017789_101017873_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.25	chr12	-	4370	15	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	189.173929256132	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8803	False	NA	-24	True	AATAAA	-25	NA	101049930	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010829_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.26	chr12	-	3819	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-706	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	213.884720046542	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8066	False	NA	-24	True	AATAAA	-25	NA	101050667	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008686_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101050353
ES.8282.27	chr12	-	4991	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	15	0	intron_retention	FALSE	canonical	3	56	junction_4	195.276217242162	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8792	False	NA	-24	True	AATAAA	-25	NA	101049941	101005770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.28	chr12	-	4832	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	15	-3	intron_retention	FALSE	canonical	3	387	junction_7	78.6164383491024	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATTAATTGTATGT	8792	False	NA	-27	True	AATAAA	-22	NA	101049941	101005773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.29	chr12	-	6397	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-11	-3	intron_retention	FALSE	canonical	3	13	junction_2	231.228893134937	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATTAATTGTATGT	8761	False	NA	-27	True	AATAAA	-22	NA	101049972	101005773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.3	chr12	-	4943	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	15	5	intron_retention	FALSE	canonical	3	387	junction_7	78.6164383491024	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTACCTTATTAAAACAT	8792	False	NA	84	True	AATAAA	-18	NA	101049941	101005662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.31	chr12	-	9167	7	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-2029	-3	intron_retention	FALSE	canonical	0	0	junction_6	238.239142226648	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATTAATTGTATGT	9379	False	NA	-27	True	AATAAA	-22	NA	101019694	101005773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101016078_101017592_101017696_101017785
ES.8282.33	chr12	-	4435	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-1	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	165.791361385942	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGTATTAATTGTA	8810	False	NA	-30	True	AATAAA	-19	NA	101049923	101005776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008686_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.34	chr12	-	4563	16	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	222.426876873177	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGTATTAATTGTA	8816	False	NA	-30	True	AATAAA	-19	NA	101049917	101005776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010445_101010568_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.35	chr12	-	3804	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	200	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	165.42795460038	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGTATTAATTGTA	9011	False	NA	-30	True	AATAAA	-19	NA	101049722	101005776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101049390
ES.8282.36	chr12	-	5055	4	ISM	ENSMUSG00000041846.16	ENSMUST00000223091.2	1065	6	4267	-2764	1530	-6	3prime_fragment	FALSE	canonical	3	56	junction_3	275.742633627809	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGTATTAATTGTA	2737	False	NA	-30	True	AATAAA	-19	NA	101013398	101005776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101008905_101009701_101009845_101010748_101010919_101011784
ES.8282.37	chr12	-	4407	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	163.048509120846	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTGTATTAATTGTA	8787	False	NA	-30	True	AATAAA	-19	NA	101049946	101005776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.39	chr12	-	4383	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	161.205914713994	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTGTATTAATTG	8784	False	NA	-32	True	AATAAA	-17	NA	101049949	101005778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017873_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.4	chr12	-	4521	15	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_8	159.294618585199	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTACCTTATTAAAACAT	8801	False	NA	84	True	AATAAA	-18	NA	101049932	101005662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017873_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.42	chr12	-	4518	16	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-8	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	197.577596570731	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTGTATTAATTG	8764	False	NA	-32	True	AATAAA	-17	NA	101049969	101005778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010829_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.43	chr12	-	8907	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-329	-8	intron_retention	FALSE	canonical	3	56	junction_5	153.297446628628	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTGTATTAATTG	8443	False	NA	-32	True	AATAAA	-17	NA	101050290	101005778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.44	chr12	-	4216	16	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	15	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	236.941192891588	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAATTGTATTAATTG	8792	False	NA	-32	True	AATAAA	-17	NA	101049941	101005778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101049390
ES.8282.46	chr12	-	3592	12	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-1	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	183.617865855033	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAAATTGTATTAATT	8810	False	NA	-33	True	AATAAA	-16	NA	101049923	101005779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101031242_101031342_101034895_101034952_101048987
ES.8282.47	chr12	-	4244	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-10	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	171.275065111633	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAAATTGTATTAATT	8801	False	NA	-33	True	AATAAA	-16	NA	101049932	101005779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.48	chr12	-	3360	13	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-13633	-9	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	178.462472712519	814	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAAATTGTATTAATT	8833	False	NA	-33	True	AATAAA	-16	NA	101031298	101005779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008301_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242
ES.8282.49	chr12	-	4323	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-10	-10	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	164.733055553027	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAGAAATTGTATTAAT	8801	False	NA	-34	True	AATAAA	-15	NA	101049932	101005780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010829_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.5	chr12	-	4596	15	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	189.68464699633	824	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTACCTTATTAAAAC	8766	False	NA	82	True	AATAAA	-16	NA	101049967	101005664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017796_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.50	chr12	-	8015	11	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-10433	-11	intron_retention	FALSE	canonical	3	490	junction_9	67.4478316923532	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGAGAAATTGTATTAA	975	False	NA	-35	True	AATAAA	-14	NA	101028098	101005781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582
ES.8282.51	chr12	-	4430	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	1	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	165.482165017187	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAGAAAAGTGA	8778	False	NA	-57	True	ATTAAA	-45	NA	101049955	101005803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017713_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.55	chr12	-	3921	16	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	2	-169	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	184.305471070901	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACAGTTTTGTTAAAC	8813	False	NA	NA	False	AATAGA	-14	NA	101049920	101005939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101005947_101006306_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.56	chr12	-	4234	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-18	300	16	-197	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGGGAAATAGAGTGGA	8793	False	NA	NA	False	ATTAAA	-26	NA	101049940	101005967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.57	chr12	-	4082	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-45	479	-6	27	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTAATTTGTGT	8766	False	NA	NA	False	ATTAAA	-41	NA	101049967	101006146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.58	chr12	-	3993	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	8	6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	161.205914713994	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAACGTGCTGGCACCTG	8785	False	NA	NA	False	ATTAAA	-20	NA	101049948	101006167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017873_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.59	chr12	-	4035	15	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-5	5	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	188.229993922979	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTAACGTGCTGGCACCT	8806	False	NA	NA	False	ATTAAA	-19	NA	101049927	101006168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.6	chr12	-	4692	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	15	1	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGGTACCTTATTAAA	8792	False	NA	80	True	AATAAA	-14	NA	101049941	101005666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.60	chr12	-	4197	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	8	5	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTAACGTGCTGGCACCT	8785	False	NA	NA	False	ATTAAA	-19	NA	101049948	101006168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.61	chr12	-	4052	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	35	-4	1	4	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTAACGTGCTGGCACC	8812	False	NA	NA	False	ATTAAA	-18	NA	101049921	101006169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.62	chr12	-	4892	4	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	1117	0	intron_retention	FALSE	canonical	3	587	junction_3	45.73352769638	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGCCTAACGTGCTGG	2324	False	NA	NA	False	ATTAAA	-14	NA	101013811	101006173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748
ES.8282.63	chr12	-	3914	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	164.733055553027	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATAGCCTAACGTGCTG	8816	False	NA	NA	False	ATTAAA	-13	NA	101049917	101006174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010829_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.64	chr12	-	4187	6	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	550	-3	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	233.409511374323	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATATAGCCTAACGTGC	1757	False	NA	NA	False	ATTAAA	-11	NA	101014378	101006176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784
ES.8282.65	chr12	-	3933	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	-50	633	-11	-127	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTCATTTGTGTCATA	8761	False	NA	1	True	ATTAAA	-19	NA	101049972	101006300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.66	chr12	-	2990	14	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-623	-128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	230.98897230267	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8149	False	NA	0	True	ATTAAA	-18	NA	101050584	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101050353
ES.8282.67	chr12	-	5881	14	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-155	-128	intron_retention	FALSE	canonical	3	490	junction_9	62.0944117963232	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8617	False	NA	0	True	ATTAAA	-18	NA	101050116	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.68	chr12	-	8072	15	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-17	-128	intron_retention	FALSE	canonical	3	56	junction_5	179.651888440974	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8794	False	NA	0	True	ATTAAA	-18	NA	101049939	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.69	chr12	-	4113	16	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-2	-128	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	206.879825556341	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8775	False	NA	0	True	ATTAAA	-18	NA	101049958	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.7	chr12	-	6890	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-10	0	intron_retention	FALSE	canonical	3	56	junction_4	200.004023628165	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGGTACCTTATTAA	8801	False	NA	79	True	AATAAA	-13	NA	101049932	101005667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.70	chr12	-	8195	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-140	-128	intron_retention	FALSE	canonical	3	56	junction_5	153.297446628628	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8632	False	NA	0	True	ATTAAA	-18	NA	101050101	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.71	chr12	-	5886	15	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-4	-128	intron_retention	FALSE	canonical	3	56	junction_5	192.746171777013	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCATTTGTGTCAT	8768	False	NA	0	True	ATTAAA	-18	NA	101049965	101006301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.72	chr12	-	4705	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	-751	129	-746	-129	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCATTTGTGTCA	8026	False	NA	-1	True	ATTAAA	-17	NA	101050707	101006302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.74	chr12	-	4036	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	1	-129	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCATTTGTGTCA	8812	False	NA	-1	True	ATTAAA	-17	NA	101049921	101006302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.75	chr12	-	3927	15	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	15	-129	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	165.791361385942	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCATTTGTGTCA	8792	False	NA	-1	True	ATTAAA	-17	NA	101049941	101006302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008686_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.76	chr12	-	4000	16	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-13	-130	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	225.146727466532	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	8798	False	NA	-2	True	ATTAAA	-16	NA	101049935	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017873_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.77	chr12	-	3879	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	11	-130	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	163.048509120846	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	8788	False	NA	-2	True	ATTAAA	-16	NA	101049945	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.78	chr12	-	4145	17	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	13	-130	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	245.160972309522	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	8790	False	NA	-2	True	ATTAAA	-16	NA	101049943	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101028672_101028761_101031242_101031342_101034895_101034952_101048987
ES.8282.79	chr12	-	6089	13	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-1	-130	intron_retention	FALSE	canonical	3	490	junction_8	59.5956281021426	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	8810	False	NA	-2	True	ATTAAA	-16	NA	101049923	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.8	chr12	-	6352	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	3	0	intron_retention	FALSE	canonical	3	490	junction_9	62.0944117963232	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGGTACCTTATTAA	8780	False	NA	79	True	AATAAA	-13	NA	101049953	101005667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.80	chr12	-	3762	16	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-13	-130	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	160.61041892314	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	8798	False	NA	-2	True	ATTAAA	-16	NA	101049935	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987_101049182_101049312
ES.8282.81	chr12	-	5616	15	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	201	-130	intron_retention	FALSE	canonical	3	13	junction_2	231.228893134937	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	9012	False	NA	-2	True	ATTAAA	-16	NA	101049721	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.82	chr12	-	3179	15	NNC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	206	-130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	189.624440859897	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGTGGTCATTTGTGTC	9017	False	NA	-2	True	ATTAAA	-16	NA	101049716	101006303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101049521
ES.8282.83	chr12	-	3752	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	-4	-131	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	171.275065111633	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTCATTTGTGT	8768	False	NA	-3	True	ATTAAA	-15	NA	101049965	101006304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.84	chr12	-	5677	14	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	15	-133	intron_retention	FALSE	canonical	3	13	junction_2	163.860093303753	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATGTGGTCATTTGT	8792	False	NA	-5	True	ATTAAA	-13	NA	101049941	101006306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.85	chr12	-	3778	16	NNC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	1	-133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	160.61041892314	823	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGATGTGGTCATTTGT	8778	False	NA	-5	True	ATTAAA	-13	NA	101049955	101006306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987_101049172_101049303
ES.8282.86	chr12	-	4570	8	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	-4	6104	intron_retention	FALSE	canonical	3	490	junction_3	48.6939630839011	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATAGATTGGGATTTT	8768	False	NA	NA	False	NA	NA	NA	101049965	101017125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.87	chr12	-	1394	4	FSM	ENSMUSG00000041846.16	ENSMUST00000223161.2	3100	4	44	1662	5	-1662	multi-exon	FALSE	canonical	3	536	junction_1	24.5673676969177	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGAACTGCTCTTTTTGA	8816	False	NA	NA	False	ATTAAA	-16	NA	101049917	101024891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101025201_101031242_101031342_101034895_101034952_101048987
ES.8282.88	chr12	-	176	1	Intergenic	novelGene_6846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	708	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101046449	101046273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_101046300_101046400
ES.8282.9	chr12	-	4481	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	4	-7	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	163.048509120846	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCATTAAGTGGTACC	8815	False	NA	72	True	AATAAA	-6	NA	101049918	101005674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101007039_101008083_101008311_101008737_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ES.8283.1	chr12	-	2172	1	ISM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	70899	10	61912	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGAACTGAGTTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	101613883	101611711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101611700_101613900
ES.8283.2	chr12	-	5203	12	FSM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	-46	133	-46	-133	multi-exon	FALSE	canonical	0	0	junction_3	2.40522846460417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTAGGAAGATGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	101684828	101611834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101615465_101617250_101617451_101618997_101619113_101631811_101632004_101644772_101644890_101655218_101655320_101656035_101656112_101659373_101659466_101660764_101660933_101672641_101672873_101675682_101675796_101684660
ES.8283.3	chr12	-	4939	12	FSM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	2	349	2	-349	multi-exon	FALSE	canonical	0	0	junction_3	2.40522846460417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCCAGTTGGAAATTGC	NA	False	NA	NA	False	AATAAA	-4	NA	101684780	101612050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101615465_101617250_101617451_101618997_101619113_101631811_101632004_101644772_101644890_101655218_101655320_101656035_101656112_101659373_101659466_101660764_101660933_101672641_101672873_101675682_101675796_101684660
ES.8283.4	chr12	-	4177	12	FSM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	2	1111	2	11	multi-exon	FALSE	canonical	0	0	junction_3	2.40522846460417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGATTTATTCTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	101684780	101612812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101615465_101617250_101617451_101618997_101619113_101631811_101632004_101644772_101644890_101655218_101655320_101656035_101656112_101659373_101659466_101660764_101660933_101672641_101672873_101675682_101675796_101684660
ES.8283.6	chr12	-	240	1	ISM	ENSMUSG00000021187.15	ENSMUST00000162735.8	5290	12	70896	1945	61909	-823	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTTTTACTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	101613886	101613646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101613600_101613900
ES.8283.7	chr12	-	1932	6	NNC	ENSMUSG00000021187.15	novel	5290	12	NA	NA	2	-42607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.93938769133981	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGTAATCCCAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	101684780	101657945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101658743_101659373_101659466_101660764_101660933_101672230_101672873_101675682_101675796_101684660
ES.8284.1	chr12	+	209	1	Intergenic	novelGene_6847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTATATGAACATGC	NA	False	NA	NA	False	NA	NA	NA	101750121	101750330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101750100_101750300
ES.8285.1	chr12	-	2416	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	38	3375	38	-3	multi-exon	FALSE	canonical	3	12	junction_2	1.74355957741627	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTGTGTTTGGTTAAT	NA	False	NA	NA	False	ATTAAA	-10	NA	101785276	101716198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
ES.8286.1	chr12	+	136	1	Intergenic	novelGene_6849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATGC	NA	False	NA	NA	False	NA	NA	NA	101829145	101829281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101829100_101829300
ES.8287.10	chr12	-	9702	21	NNC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	-1	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	6.83666585405488	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	7532	False	NA	NA	False	NA	NA	NA	101879415	101800349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860675_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.11	chr12	-	6344	11	ISM	ENSMUSG00000021188.15	ENSMUST00000177183.8	5076	15	8281	-2181	-2428	-1322	3prime_fragment	FALSE	canonical	3	18	junction_5	4.10365690573664	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAGAAAATGGAAGATG	NA	False	NA	NA	False	AATAAA	-21	NA	101852294	101801623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514
ES.8287.12	chr12	-	8130	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	133	1610	6	-1610	multi-exon	FALSE	canonical	3	11	junction_20	4.94064773081425	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTGTTTGCTCTACTC	7554	False	NA	NA	False	NA	NA	NA	101879393	101801911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.13	chr12	-	6981	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	144	2748	0	755	multi-exon	FALSE	canonical	3	11	junction_20	4.94064773081425	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGGTGTTTTTCACT	7565	False	NA	-2	True	NA	NA	NA	101879382	101803049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.14	chr12	-	6525	21	NIC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	4	289	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	5.42678542048605	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGTCTGTCTGTTTTT	7552	False	NA	NA	False	NA	NA	NA	101879395	101803515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
ES.8287.15	chr12	-	6390	21	NIC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	7	157	combination_of_known_junctions	FALSE	canonical	3	7	junction_20	5.42678542048605	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGGTGTCAGAAGAGCA	7555	False	NA	NA	False	AATAAA	-24	NA	101879392	101803647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
ES.8287.16	chr12	-	5266	16	NNC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	3	157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	7.1876437183699	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGGTGTCAGAAGAGCA	NA	False	NA	NA	False	AATAAA	-24	NA	101860572	101803647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845138_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520
ES.8287.17	chr12	-	6298	21	NNC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	7	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	8.22739326883066	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGCAGGTGTCAGAAGA	7555	False	NA	NA	False	AATAAA	-21	NA	101879392	101803650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845152_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860572_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
ES.8287.18	chr12	-	6189	21	NNC	ENSMUSG00000021188.15	novel	1876	11	NA	NA	6	-1226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.95282968508694	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAAAACTCTTTGTAA	7554	False	NA	NA	False	NA	NA	NA	101879393	101805030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101805206_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838185_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.19	chr12	-	3527	2	Intergenic	novelGene_6848	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGAAATTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	101824848	101821105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_101823905_101824120
ES.8287.2	chr12	-	5838	12	NNC	ENSMUSG00000021188.15	novel	5076	15	NA	NA	-613	36	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	8.0822220985065	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGTGTCTGTTGAGG	NA	False	NA	NA	False	AATAAA	-16	NA	101850479	101800265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811067_101811115_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514
ES.8287.20	chr12	-	178	1	Intergenic	novelGene_6850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7606	False	NA	NA	False	NA	NA	NA	101829922	101829744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_101829700_101829900
ES.8287.21	chr12	-	5450	11	ISM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	134	48616	7	3561	5prime_fragment	FALSE	canonical	3	11	junction_10	3.89358446678636	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTGGGTGATCCATTAA	7555	False	NA	NA	False	AATAAA	-14	NA	101879392	101848917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.3	chr12	-	9788	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	121	-36	-6	36	multi-exon	TRUE	canonical	3	11	junction_20	4.94064773081425	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGGTGTCTGTTGAGG	7542	False	NA	NA	False	AATAAA	-16	NA	101879405	101800265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8287.5	chr12	-	4391	7	NNC	ENSMUSG00000021188.15	novel	5076	15	NA	NA	12407	35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.1653004546513	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCGGTGTCTGTTGAG	69	False	NA	NA	False	AATAAA	-15	NA	101837459	101800266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101837386
ES.8287.6	chr12	-	9788	21	NNC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	7	31	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.17269126618454	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTGCCGGTGTCTGT	7555	False	NA	NA	False	AATAAA	-11	NA	101879392	101800270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856899_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872073_101878948
ES.8287.9	chr12	-	6799	22	NNC	ENSMUSG00000021188.15	novel	9873	21	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.67856081825827	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTCTTCGTCCACA	7556	False	NA	NA	False	AATAAA	-13	NA	101879391	101800305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101800870_101803804_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ES.8288.1	chr12	+	2407	1	Genic_Genomic	ENSMUSG00000093579.2	novel	NA	NA	NA	NA	5	316	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATTTTAGTCTGCCTC	NA	False	NA	NA	False	AATAAA	-13	NA	101879503	101881910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_101879500_101881900
ES.8289.1	chr12	-	5298	12	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-21	2867	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.0196040749653	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGAATGAAGTTTTAGAA	NA	False	NA	NA	False	TATAAA	-13	NA	101924428	101882292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101882304_101885158_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.11	chr12	-	7978	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	7475	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTCTATTTCTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	101893139	101885161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101885200_101893100
ES.8289.13	chr12	-	4993	8	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	105.22900197732	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTCTATTTCTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	101924433	101885161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101924392
ES.8289.14	chr12	-	5278	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	18	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	96.8558206820839	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTCTATTTCTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	101924484	101885161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903667_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.15	chr12	-	5196	10	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-25	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	118.876219470319	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTTCTCTATTTCTAA	NA	False	NA	-8	True	AATAAA	-17	NA	101924432	101885162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
ES.8289.16	chr12	-	4889	9	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	18	-220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	125.660007560083	364	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACTGTGGCCGAGCAGT	NA	False	NA	NA	False	AATAAA	-24	NA	101924484	101885379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903706_101908375_101908464_101911658_101911726_101912092_101912179_101924392
ES.8289.17	chr12	-	5122	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	-1	242	-1	-242	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGTCTTCTGTCAATG	NA	False	NA	NA	False	AATAAA	-39	NA	101924506	101885401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.18	chr12	-	3560	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	21	1782	18	-1782	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTAAGGACCCTTTG	NA	False	NA	NA	False	GATAAA	-31	NA	101924484	101886941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.20	chr12	-	2044	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	44	931	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	96.5931674602298	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATACTGTGGGTTGAC	NA	False	NA	NA	False	AATAAA	-9	NA	101924458	101888408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903706_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.21	chr12	-	2092	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	22	3249	19	931	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATACTGTGGGTTGAC	NA	False	NA	NA	False	AATAAA	-9	NA	101924483	101888408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.22	chr12	-	1176	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	7	4180	4	0	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGTAACATTGTCTG	NA	False	NA	NA	False	AAGAAA	-34	NA	101924498	101889339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.23	chr12	-	4818	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	4493	-1964	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	101896121	101891303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101891300_101896100
ES.8289.24	chr12	-	2448	10	ISM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	50	6144	47	-1964	5prime_fragment	FALSE	canonical	3	190	junction_1	41.7943229649526	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	101924455	101891303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.25	chr12	-	1326	10	ISM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	46	7270	43	-3090	5prime_fragment	FALSE	canonical	3	190	junction_1	41.7943229649526	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGGCTTTTCCTTTTT	NA	False	NA	NA	False	NA	NA	NA	101924459	101892429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.26	chr12	-	1031	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	-31	0	-28	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTTTGTCTGTTTATA	NA	False	NA	-2	True	ATTAAA	-19	NA	101924533	101899184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.29	chr12	-	926	9	NNC	ENSMUSG00000021189.12	novel	1000	9	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	104.76573569159	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACCTGCTGATTTTGTC	NA	False	NA	-10	True	ATTAAA	-11	NA	101924426	101899192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914709_101924392
ES.8289.3	chr12	-	5437	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	97.0270580817537	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924484	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914438_101914699_101924392
ES.8289.30	chr12	-	2660	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	17	-22618	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGCCAGGGTACTGT	NA	False	NA	NA	False	NA	NA	NA	101924485	101921825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_101921800_101924500
ES.8289.4	chr12	-	5400	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	-37	0	-37	0	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924542	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.5	chr12	-	5461	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	95.7290447043111	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924487	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924276
ES.8289.6	chr12	-	5150	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	136.584076670745	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924424	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903667_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914438_101914534_101924392
ES.8289.7	chr12	-	5377	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	121.028137224366	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924426	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903706_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924276
ES.8289.8	chr12	-	5330	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	96.5931674602298	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924495	101885159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903706_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ES.8289.9	chr12	-	5242	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	46	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_9	122.217183734531	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTCTCTATTTCTAAT	NA	False	NA	-7	True	AATAAA	-18	NA	101924456	101885161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914438_101914534_101924392
ES.829.1	chr1	+	185	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	78451783	78451968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78451800_78452000
ES.8290.1	chr12	-	3272	1	Intergenic	novelGene_6851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	CATAAA	-35	NA	101928027	101924755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_101924800_101928000
ES.8291.1	chr12	+	180	1	Intergenic	novelGene_6852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	101934133	101934313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_101934100_101934300
ES.8292.1	chr12	+	5977	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-481	10	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.6248395051111	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTTATTGGATGCT	NA	False	NA	21	True	NA	NA	NA	101941765	101972693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942148_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.10	chr12	+	3167	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-19	50600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	77.7736446099729	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATCGCAAAGCTCTCTG	NA	False	NA	NA	False	NA	NA	NA	101942227	102023283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101965631_101965858_101966935_101967236_101968886_101969022_101969387_101970231_102023261
ES.8292.12	chr12	+	3314	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-13	-2446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.5498653687084	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCCTCTAAGCTG	NA	False	NA	NA	False	AATAAA	-9	NA	101942233	101970237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964780_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.13	chr12	+	5142	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-9	599	-9	-599	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTGTCCTCTTTCA	NA	False	NA	4	True	NA	NA	NA	101942237	101972084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.16	chr12	+	5634	16	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	56.6668235291947	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCATGTTTCTTGTGC	NA	False	NA	9	True	NA	NA	NA	101942239	101972681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387_101972302_101972404
ES.8292.17	chr12	+	3783	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-7	1956	-7	-1956	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCCAGACTAATTTTT	NA	False	NA	NA	False	AATGAA	-18	NA	101942239	101970727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.19	chr12	+	3234	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-4	-2446	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	58.3018185035109	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCCTCTAAGCTG	NA	False	NA	NA	False	AATAAA	-9	NA	101942242	101970237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953572_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.2	chr12	+	3428	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-380	-2438	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.6248395051111	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTAAGCTGAGTGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	101941866	101970245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942148_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.20	chr12	+	5430	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-4	306	-4	-306	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCTTGTACAAGACCT	NA	False	NA	NA	False	NA	NA	NA	101942242	101972377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.21	chr12	+	4854	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-4	-897	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.5498653687084	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGGGTTGTTTACCTT	NA	False	NA	9	True	AATAAA	-16	NA	101942242	101971786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964780_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.25	chr12	+	4686	14	NIC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-3	-896	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	60.1981933716212	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGGGTTGTTTACCTTT	NA	False	NA	10	True	AATAAA	-17	NA	101942243	101971787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.27	chr12	+	4778	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	1	-897	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	58.3018185035109	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGGGTTGTTTACCTT	NA	False	NA	9	True	AATAAA	-16	NA	101942247	101971786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953572_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.28	chr12	+	4539	14	NIC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	1	-892	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	59.5773079393637	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGTTTACCTTTTTTT	NA	False	NA	14	True	AATAAA	-21	NA	101942247	101971791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101968886_101969022_101969387
ES.8292.29	chr12	+	5743	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	58.5498653687084	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTCATGTTTCTTGTG	NA	False	NA	8	True	NA	NA	NA	101942247	101972680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964780_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.31	chr12	+	6081	14	NIC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	11	-899	intron_retention	FALSE	canonical	3	176	junction_7	16.1179087430262	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACGGTGGGTTGTTTACC	NA	False	NA	7	True	AATAAA	-14	NA	101942257	101971784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.32	chr12	+	5710	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	11	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.6739653806807	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTCATGTTTCTTGTG	NA	False	NA	8	True	NA	NA	NA	101942257	101972680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942394_101948182_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968884_101969022_101969387
ES.8292.33	chr12	+	3517	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	20829	897	20829	-897	3prime_fragment	FALSE	canonical	3	217	junction_2	9.75391659226635	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGGGTTGTTTACCTT	NA	False	NA	9	True	AATAAA	-16	NA	101963075	101971786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.34	chr12	+	4420	7	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	20829	-6	20829	6	3prime_fragment	FALSE	canonical	3	217	junction_2	9.75391659226635	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTGCTTATTGGA	NA	False	NA	17	True	NA	NA	NA	101963075	101972689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.4	chr12	+	2730	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-221	-2977	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.6248395051111	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	101942025	101969706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_101942148_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.5	chr12	+	3791	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-193	2134	-193	-2134	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTTTTTAAGTTTAT	NA	False	NA	12	True	ATTAAA	-24	NA	101942053	101970549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.6	chr12	+	5864	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-126	-6	-126	6	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTGCTTATTGGA	NA	False	NA	17	True	NA	NA	NA	101942120	101972689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.7	chr12	+	4873	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-31	890	-31	-890	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTTACCTTTTTTTTT	NA	False	NA	16	True	AATAAA	-23	NA	101942215	101971793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.8	chr12	+	3319	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-19	2432	-19	-2432	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAGTGTGGTACGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	101942227	101970251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8292.9	chr12	+	2783	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	-19	2968	-19	-2968	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAAATGTAAATAGA	NA	False	NA	NA	False	NA	NA	NA	101942227	101969715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ES.8293.2	chr12	-	443	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	413	5	86	-5	multi-exon	FALSE	canonical	3	1653	junction_2	166	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTGATTCTTTTAT	NA	False	NA	-2	True	AATAAA	-27	NA	101942100	101934353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_101934470_101935751_101935897_101941918
ES.8294.1	chr12	+	3910	10	NNC	ENSMUSG00000044456.17	novel	3892	10	NA	NA	-156	-80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.57240820062005	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCACAGGTCATCAG	NA	False	NA	NA	False	ATTAAA	-17	NA	102249150	102357034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348869_102348944_102353812_102353977_102356082
ES.8294.2	chr12	+	3921	10	FSM	ENSMUSG00000044456.17	ENSMUST00000056950.14	3892	10	-32	3	-32	-3	multi-exon	FALSE	canonical	0	0	junction_8	2.36225462505214	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCCTGAAGGAGCCAG	NA	False	NA	NA	False	AATAAA	-19	NA	102249274	102357111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
ES.8294.4	chr12	+	3857	11	NNC	ENSMUSG00000044456.17	novel	3892	10	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.76405499221705	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCCCTGAAGGAGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	102249456	102357110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102249586_102279233_102279442_102292053_102292172_102299909_102300029_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
ES.8295.1	chr12	+	4073	1	Antisense	novelGene_ENSMUSG00000021190.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102367255	102371328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102367300_102371300
ES.8295.2	chr12	+	3734	1	Antisense	novelGene_ENSMUSG00000021190.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGGGGGGAATCACCC	NA	False	NA	NA	False	NA	NA	NA	102367255	102370989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102367300_102371000
ES.8296.1	chr12	-	1950	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	57	-17	57	3	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTTGTGGTTTGTGT	7546	False	NA	0	True	AAAACA	-32	NA	102406015	102360339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ES.8296.10	chr12	-	1785	14	NNC	ENSMUSG00000021190.15	novel	1990	14	NA	NA	141	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	130.152345872422	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTTTCTGGACTC	7630	False	NA	-18	True	AAAACA	-14	NA	102405931	102360357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379818_102389902_102390015_102405889
ES.8296.2	chr12	-	6302	13	NNC	ENSMUSG00000021190.15	novel	1835	13	NA	NA	5332	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	135.282112638737	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTTTGTGGTTTGTG	NA	False	NA	-1	True	AAAACA	-31	NA	102384696	102360340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102383752_102383976
ES.8296.3	chr12	-	1945	12	NNC	ENSMUSG00000021190.15	novel	1835	13	NA	NA	1638	1	intron_retention	FALSE	canonical	1	10	junction_11	138.484059410258	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCTTTGTGGTTTGT	9995	False	NA	-2	True	AAAACA	-30	NA	102388390	102360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102388239
ES.8296.4	chr12	-	1890	14	NNC	ENSMUSG00000021190.15	novel	1990	14	NA	NA	88	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	130.152345872422	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCTTTGTGGTTTGT	7577	False	NA	-2	True	AAAACA	-30	NA	102405984	102360341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364616_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ES.8296.5	chr12	-	1899	14	NNC	ENSMUSG00000021190.15	novel	1990	14	NA	NA	145	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_13	127.365243789049	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTTTGTGGTTTG	7634	False	NA	-3	True	AAAACA	-29	NA	102405927	102360342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405849
ES.8296.8	chr12	-	4391	11	NIC	ENSMUSG00000021190.15	novel	1990	14	NA	NA	85	2	intron_retention	FALSE	canonical	3	371	junction_1	39.8246155034798	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTCTGGACTCTGG	7574	False	NA	-15	True	AAAACA	-17	NA	102405987	102360354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_102362074_102364441_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ES.8297.1	chr12	-	178	1	Intergenic	novelGene_6853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGAAATGGGG	2436	False	NA	NA	False	NA	NA	NA	102411125	102410947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102410900_102411100
ES.8298.1	chr12	+	2996	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-54	-115	-54	113	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTTAATAACG	NA	False	NA	NA	False	AATAAA	-18	NA	102435339	102464279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.10	chr12	+	3483	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	12	-105	12	105	multi-exon	FALSE	canonical	2	10	junction_1	41.9333962638637	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	102435462	102464271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.11	chr12	+	3414	4	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	74	-20466	intron_retention	FALSE	canonical	3	120	junction_2	13.4742552876052	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTGTGTATCTGTCAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	102435524	102443375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102435623_102438256_102441033_102442428_102442649_102443055
ES.8298.12	chr12	+	5355	12	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	74	112	intron_retention	FALSE	canonical	3	120	junction_3	16.6787834742771	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTTTAATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	102435524	102464278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.13	chr12	+	3598	1	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	74	-24719	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTAGTCTTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	102435524	102439122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102435500_102439100
ES.8298.14	chr12	+	2260	2	NNC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	74	-24724	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAAAATTAGTCTTT	NA	False	NA	NA	False	NA	NA	NA	102435524	102439117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102436924_102438256
ES.8298.15	chr12	+	2801	14	NNC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	77	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	55.5589137709538	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	102435527	102464161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102452858_102452970_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.16	chr12	+	3981	13	NNC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	87	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.2046165228774	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	102435537	102464161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102436924_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.17	chr12	+	4354	12	ISM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	153	3	96	-3	intron_retention	FALSE	canonical	3	120	junction_3	17.349113393404	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	102435546	102464161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958
ES.8298.18	chr12	+	2652	13	NNC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	126	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4824403557179	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	102435576	102464161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102435630_102438252_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.19	chr12	+	1581	9	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	7097	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.4391327201383	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	2907	False	NA	NA	False	AATAAA	-15	NA	102442547	102464161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.2	chr12	+	2862	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	-30	-5	-30	3	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTTTATATTTTCAT	NA	False	NA	NA	False	AATAAA	-23	NA	102435363	102464169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.20	chr12	+	937	3	ISM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	24250	6	8985	-4	3prime_fragment	FALSE	canonical	3	143	junction_2	11	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTTAGAGTGCTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	102459700	102464160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_102460119_102461958_102462023_102463705
ES.8298.3	chr12	+	3469	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	-79	0	-22	0	multi-exon	FALSE	canonical	2	10	junction_1	41.9333962638637	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTGCTTTATATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	102435371	102464166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.4	chr12	+	4260	13	NNC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	-18	112	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.2046165228774	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTTTAATAAC	NA	False	NA	NA	False	AATAAA	-17	NA	102435375	102464278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102436924_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.5	chr12	+	2943	2	NNC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	-18	-24719	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATTAGTCTTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	102435375	102439122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102437453_102438256
ES.8298.6	chr12	+	2842	13	NNC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	10	104	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	43.5936890182767	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTTTTCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-9	NA	102435403	102464270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458352_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.7	chr12	+	5360	12	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	11	-1	intron_retention	FALSE	canonical	3	120	junction_3	16.6787834742771	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTGCTTTATAT	NA	False	NA	NA	False	AATAAA	-17	NA	102435404	102464163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.8	chr12	+	3205	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	11	-389	11	387	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTCTTTGAATTGTCC	NA	False	NA	NA	False	NA	NA	NA	102435404	102464553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ES.8298.9	chr12	+	5153	1	NIC	ENSMUSG00000021192.17	novel	2827	13	NA	NA	16	-23279	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102435409	102440562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102435400_102440600
ES.8299.1	chr12	-	2953	1	Antisense	novelGene_ENSMUSG00000021192.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGACAC	NA	False	NA	NA	False	NA	NA	NA	102441203	102438250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_102438200_102441200
ES.83.1	chr1	+	4497	30	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-13	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.1299104004089	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGTTTCTTTCTTTAC	NA	False	NA	10	True	AATAAA	-23	NA	10108198	10206999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108463_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.10	chr1	+	4375	31	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	43.0043408661653	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10108443	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10130048_10130073_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.12	chr1	+	4206	30	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	36.8640527191128	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTACCAGTGTCGGTTT	NA	False	NA	0	True	AATAAA	-13	NA	10108473	10206989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10156084_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.13	chr1	+	4212	29	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.3308942200064	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10108481	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108570_10115300_10115409_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.14	chr1	+	2142	13	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	42.1482173077607	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10108486	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108568_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.15	chr1	+	4291	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-26	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	38.306897125021	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109965	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.16	chr1	+	4206	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-13	6	combination_of_known_junctions	FALSE	canonical	2	10	junction_16	32.5407711296811	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGTTTCTTTCTTTAC	NA	False	NA	10	True	AATAAA	-23	NA	10109978	10206999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.17	chr1	+	4238	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	33.468916435208	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10109983	10206993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10204316_10204456_10206158
ES.83.18	chr1	+	4342	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	22.942776355976	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10109990	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.19	chr1	+	4355	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	6	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	29.4810041825238	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGTTTCTTTCTTTAC	NA	False	NA	10	True	AATAAA	-23	NA	10109990	10206999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.2	chr1	+	4382	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.1299104004089	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10108211	10206993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108367_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.20	chr1	+	4239	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	34.24685297623	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109991	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.21	chr1	+	2355	18	NIC	ENSMUSG00000056763.17	novel	2162	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	34.2997170285018	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTGTGTACTAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	10109991	10178776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593
ES.83.22	chr1	+	604	3	ISM	ENSMUSG00000056763.17	ENSMUST00000118263.8	2162	7	-5	20178	1	264	5prime_fragment	FALSE	canonical	2	28	junction_1	31.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGAGAGAGTCTGTA	NA	False	NA	NA	False	AATAAA	-26	NA	10109992	10118023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10110113_10115300_10115410_10117648
ES.83.23	chr1	+	4287	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_6	32.2144272374263	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109992	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135597_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.25	chr1	+	2055	6	NNC	ENSMUSG00000056763.17	novel	1268	7	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	50.3094424536786	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCCTGGGATCTTGATG	NA	False	NA	NA	False	ATTAAA	-32	NA	10109994	10138199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115409_10117648_10117752_10128944_10129049_10134557_10134639_10136650
ES.83.26	chr1	+	4399	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-2	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	33.5029414649136	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTAACTACCAG	NA	False	NA	-9	True	AATAAA	-4	NA	10109995	10206980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182844_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.27	chr1	+	4174	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.8033848034513	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109996	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10131482_10131530_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.29	chr1	+	4362	31	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	43.5102159140688	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTACCAGTGTCGGTT	NA	False	NA	-1	True	AATAAA	-12	NA	10109996	10206988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10130048_10130073_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.3	chr1	+	4324	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	32.9929189246368	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10108258	10206993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10108356_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.30	chr1	+	4228	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	38.0130213994937	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTACCAGTGTCGGTT	NA	False	NA	-1	True	AATAAA	-12	NA	10109996	10206988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10204316_10204456_10206158
ES.83.31	chr1	+	3397	7	FSM	ENSMUSG00000056763.17	ENSMUST00000118263.8	2162	7	0	-1235	0	878	multi-exon	FALSE	canonical	2	28	junction_1	36.6397628570686	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTGGTGTTTGCTTCTC	NA	False	NA	NA	False	GATAAA	-23	NA	10109997	10139436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
ES.83.32	chr1	+	4235	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.9879814506362	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10109999	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.33	chr1	+	2987	23	NIC	ENSMUSG00000056763.17	novel	2535	8	NA	NA	-1	132	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	23.3949206891066	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGATTGCACAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	10110000	10187088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838
ES.83.34	chr1	+	3814	25	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	34.4217863423733	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCAGTGTCGGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	10110000	10206992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.35	chr1	+	4277	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_28	37.6687167759057	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTACCAGTGTCGGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	10110003	10206990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204372_10204456_10206158
ES.83.36	chr1	+	3557	24	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	34.2614213153542	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTACCAGTGTCGGTTT	NA	False	NA	0	True	AATAAA	-13	NA	10110003	10206989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10136964_10159141_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.37	chr1	+	4119	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	3	-2	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	32.3152519749434	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10110004	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.38	chr1	+	3878	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	40.3607690285444	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTATAGAATTATTTTT	NA	False	NA	NA	False	CATAAA	-21	NA	10110004	10206547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197645_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204321_10204456_10206158
ES.83.39	chr1	+	4386	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	33.5029414649136	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTACCAGTGTCGGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	10110004	10206990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182830_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.4	chr1	+	4394	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	-33	-6	-33	6	multi-exon	FALSE	canonical	2	35	junction_1	28.6386316840114	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGTTTCTTTCTTTAC	NA	False	NA	10	True	AATAAA	-23	NA	10108408	10206999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.40	chr1	+	2463	7	NNC	ENSMUSG00000056763.17	novel	1268	7	NA	NA	4	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.0567283056691	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTACATTTTGTTAA	NA	False	NA	NA	False	NA	NA	NA	10110005	10138519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115409_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
ES.83.41	chr1	+	3820	25	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	39.6521113001005	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCGGTTTCTTTCTT	NA	False	NA	7	True	AATAAA	-20	NA	10110006	10206996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.43	chr1	+	5702	4	ISM	ENSMUSG00000056763.17	ENSMUST00000118263.8	2162	7	10	3872	-2	2333	5prime_fragment	FALSE	canonical	2	28	junction_1	35.0460015154685	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGTATGTGTTGCAA	NA	False	NA	NA	False	NA	NA	NA	10110007	10134329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944
ES.83.45	chr1	+	2149	7	NNC	ENSMUSG00000056763.17	novel	2162	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	52.6371225150717	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTGGGATCTTGATGGT	NA	False	NA	NA	False	ATTAAA	-34	NA	10110009	10138201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110113_10115300_10115409_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
ES.83.46	chr1	+	4173	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	2	10	junction_16	37.2679726536645	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTACCAGTGTCGGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	10110010	10206990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.48	chr1	+	3949	31	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.9634416269003	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATAGAATTATTTTTGC	NA	False	NA	NA	False	CATAAA	-23	NA	10110013	10206549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117448_10117524_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.5	chr1	+	3848	25	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	38.9350420572522	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10108433	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.50	chr1	+	4097	29	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	33.8981818788837	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10110018	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186883_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.51	chr1	+	4142	28	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	44.4908091493674	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCGGTTTCTTTCTTT	NA	False	NA	8	True	AATAAA	-21	NA	10110020	10206997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110113_10115300_10115409_10117648_10117752_10128944_10129049_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.55	chr1	+	4207	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-9	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	34.1805679369111	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10110038	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.56	chr1	+	4314	31	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	45.8378906825153	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10110041	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10130048_10130073_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197645_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.57	chr1	+	6075	30	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	37.7363971759264	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10110048	10206993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10154187_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.58	chr1	+	2088	10	NIC	ENSMUSG00000056763.17	novel	2535	8	NA	NA	3	-836	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	24.8958323647915	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCTGTGCAAATTACTT	NA	False	NA	NA	False	AATAAA	-24	NA	10110050	10153462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477
ES.83.59	chr1	+	3316	7	FSM	ENSMUSG00000056763.17	ENSMUST00000119714.8	1268	7	53	-2101	15	870	multi-exon	FALSE	canonical	2	91	junction_2	18.4157239577729	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAAGCCATTGGTGTT	NA	False	NA	NA	False	GATAAA	-15	NA	10110062	10139428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
ES.83.6	chr1	+	4263	29	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	38.1421047277313	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10108434	10206993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.60	chr1	+	4055	27	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	1792	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.7189986944918	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCGGTTTCTTTCTT	NA	False	NA	7	True	AATAAA	-20	NA	10128940	10206996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10154715_10154955_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.61	chr1	+	8725	26	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	2598	1	intron_retention	FALSE	non_canonical	0	0	junction_4	33.6079990478457	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10129746	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147394_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.62	chr1	+	5522	23	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-4418	-2	intron_retention	FALSE	canonical	1	1	junction_21	34.4325907504086	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10136989	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204372_10204456_10206158
ES.83.63	chr1	+	6046	22	ISM	ENSMUSG00000056763.17	ENSMUST00000186294.7	3429	29	25502	-621	812	-2	3prime_fragment	FALSE	canonical	3	10	junction_9	34.2506434386818	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10142219	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.64	chr1	+	5151	23	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-1321	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	35.2407305671873	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10143285	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183809_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.65	chr1	+	4625	22	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-1018	-1	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	33.7152945773187	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCAGTGTCGGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	10143588	10206992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.66	chr1	+	3339	23	ISM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	36641	-1	-2	1	3prime_fragment	FALSE	canonical	3	98	junction_4	19.5720748951786	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10145082	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.67	chr1	+	1742	2	NNC	ENSMUSG00000056763.17	novel	825	4	NA	NA	1844	2405	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAGCATATTAGGTTG	NA	False	NA	NA	False	NA	NA	NA	10146981	10148821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10147683_10147780
ES.83.68	chr1	+	6665	22	NNC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	3790	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3598283411764	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTCGGTTTCTTTC	NA	False	NA	5	True	AATAAA	-18	NA	10148927	10206994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10151522_10151585_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.70	chr1	+	2478	15	ISM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	57647	1	0	-1	3prime_fragment	FALSE	canonical	3	121	junction_3	13.5181284177347	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCAGTGTCGGTTTCTT	NA	False	NA	3	True	AATAAA	-16	NA	10166088	10206992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.71	chr1	+	3429	1	NIC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	-1825	-2712	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTATCCAAGGCCACCT	NA	False	NA	NA	False	NA	NA	NA	10172627	10176056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_10172600_10176100
ES.83.72	chr1	+	2460	9	ISM	ENSMUSG00000056763.17	ENSMUST00000186294.7	3429	29	68724	-621	-208	-2	3prime_fragment	FALSE	canonical	3	143	junction_1	7.72981241687015	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10185441	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.83.73	chr1	+	5448	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10189369	10194817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10189400_10194800
ES.83.9	chr1	+	4284	30	NNC	ENSMUSG00000056763.17	novel	4355	30	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.1299104004089	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCAGTGTCGGTTTCT	NA	False	NA	2	True	AATAAA	-15	NA	10108443	10206991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_10108503_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ES.830.1	chr1	-	2849	4	ISM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	31815	-1	31751	1	3prime_fragment	FALSE	canonical	3	22	junction_1	621.092764586919	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCTCTGCTACTATC	NA	False	NA	NA	False	AATAAA	-19	NA	78433681	78394610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390
ES.830.10	chr1	-	1998	18	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	444.282836439047	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465492	78401722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78410379_78410487_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.12	chr1	-	1779	16	NIC	ENSMUSG00000026245.17	novel	2036	18	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	36	junction_12	352.114653044841	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465496	78401722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.13	chr1	-	1722	15	NIC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_14	458.270729181441	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465495	78401722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78454829_78454900_78456593_78456749_78465421
ES.830.14	chr1	-	1886	17	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	346.528267019806	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTTGCGTAGCTGCAT	NA	False	NA	-4	True	AATAAA	-17	NA	78465494	78401723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420422_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.16	chr1	-	1881	17	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	332.459484138669	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTTGCGTAGCTGCAT	NA	False	NA	-4	True	AATAAA	-17	NA	78465492	78401723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78458992_78465421
ES.830.17	chr1	-	1595	13	NIC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	387.267887471536	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTGCGTAGCTGCA	NA	False	NA	-5	True	AATAAA	-16	NA	78465492	78401724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.18	chr1	-	5556	16	NIC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	979	junction_8	159.187101655044	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTGCGTAGCTGCA	NA	False	NA	-5	True	AATAAA	-16	NA	78465511	78401724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.19	chr1	-	1930	18	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	443.47067796477	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTGCGTAGCTGCA	NA	False	NA	-5	True	AATAAA	-16	NA	78465494	78401724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445656_78445696_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.2	chr1	-	2041	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	-4	-1	-1	1	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCTCTGCTACTATC	NA	False	NA	NA	False	AATAAA	-19	NA	78465500	78394610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.20	chr1	-	5571	16	NIC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	979	junction_8	156.5006780248	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTGCGTAGCTGCA	NA	False	NA	-5	True	AATAAA	-16	NA	78465481	78401724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.23	chr1	-	1619	15	NIC	ENSMUSG00000026245.17	novel	1801	17	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	458.270729181441	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTGCGTAGCTGCA	NA	False	NA	-5	True	AATAAA	-16	NA	78465492	78401724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78454829_78454900_78456593_78456651_78465421
ES.830.25	chr1	-	1915	18	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	445.124717175794	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGACTCCTTGCGTAGCT	NA	False	NA	-8	True	AATAAA	-13	NA	78465494	78401727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78449661_78449689_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.26	chr1	-	3223	7	ISM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	23278	7	23211	-7	3prime_fragment	FALSE	canonical	3	1154	junction_6	86.0038758816524	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTCCTTGCGTAGC	NA	False	NA	-9	True	AATAAA	-12	NA	78442221	78401728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908
ES.830.27	chr1	-	1876	17	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	348.059890679751	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTCCTTGCGTAGC	NA	False	NA	-9	True	AATAAA	-12	NA	78465490	78401728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456742_78458944_78459001_78465421
ES.830.28	chr1	-	1793	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	31	127	-4	-110	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGTCTCTGAGTGTCC	NA	False	NA	-112	True	NA	NA	NA	78465503	78401831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.29	chr1	-	4456	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTATTTTTTATCTTT	NA	False	NA	NA	False	AATAAA	-4	NA	78428887	78424431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_78424400_78428900
ES.830.3	chr1	-	2052	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	7	-258	4	241	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAATCAGTATGACCAAG	NA	False	NA	NA	False	AATAAA	-20	NA	78465492	78401463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
ES.830.30	chr1	-	2807	16	NNC	ENSMUSG00000026245.17	novel	970	11	NA	NA	2	13653	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	358.826606222746	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAACTGATTTTTTTTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	78465494	78425979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78427310_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.31	chr1	-	7045	3	NIC	ENSMUSG00000026245.17	novel	970	11	NA	NA	11006	-2434	intron_retention	FALSE	canonical	3	1084	junction_2	94	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGAGGGAGGGCGGAA	NA	False	NA	NA	False	AAAACA	-21	NA	78454426	78442066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_78445960_78447719_78449272_78452826
ES.830.4	chr1	-	2148	17	NNC	ENSMUSG00000026245.17	novel	2036	18	NA	NA	0	232	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	348.864139028362	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTTTCAGAATCAGT	NA	False	NA	NA	False	AATAAA	-11	NA	78465496	78401472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449274_78452825_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.5	chr1	-	2186	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	-252	17	-252	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465786	78401721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.830.7	chr1	-	1793	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	7	1	4	-1	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465492	78401722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
ES.830.8	chr1	-	1850	17	NNC	ENSMUSG00000026245.17	novel	1951	17	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	347.833602234962	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTTGCGTAGCTGCATT	NA	False	NA	-3	True	AATAAA	-18	NA	78465497	78401722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78401983_78420271_78420382_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ES.8300.1	chr12	+	1880	8	NNC	ENSMUSG00000021194.7	novel	1883	8	NA	NA	6	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	12.4948969175256	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTTGATTTATTTTC	NA	False	NA	23	True	AATAAA	-17	NA	102521233	102531286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527767_102527925_102528343_102528856_102529333_102530868
ES.8301.1	chr12	-	175	1	Intergenic	novelGene_6854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGATAGACAG	NA	False	NA	NA	False	NA	NA	NA	102523098	102522923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102522900_102523100
ES.8302.1	chr12	+	2421	1	Intergenic	novelGene_6857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCATTCTCTATTGTACT	6148	False	NA	NA	False	NA	NA	NA	102653184	102655605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102653200_102655600
ES.8303.1	chr12	+	2388	1	Antisense	novelGene_ENSMUSG00000057963.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATGTTCCACTCTGCT	NA	False	NA	NA	False	NA	NA	NA	102670262	102672650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102670300_102672600
ES.8304.1	chr12	+	292	1	Intergenic	novelGene_6859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGAGCC	NA	False	NA	NA	False	NA	NA	NA	102675320	102675612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102675300_102675600
ES.8304.2	chr12	+	181	1	Intergenic	novelGene_6858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	102675320	102675501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102675300_102675500
ES.8305.1	chr12	+	176	1	Intergenic	novelGene_6860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAACAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	102682098	102682274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102682100_102682300
ES.8306.1	chr12	+	3516	8	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-23606	-2156	intron_retention	FALSE	canonical	0	0	junction_1	22.3524641384619	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGCTTGCTTTAAAAAT	NA	False	NA	5	True	CATAAA	-20	NA	102686414	102711664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102686524_102695980_102696164_102696249_102696329_102698969_102699155_102700108_102700230_102701805_102703451_102709641_102710030_102710858
ES.8306.2	chr12	+	3174	3	Antisense	novelGene_ENSMUSG00000098530.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAACAAAACAAAACC	NA	False	NA	NA	False	NA	NA	NA	102695873	102703676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102696164_102696249_102698387_102702929
ES.8306.3	chr12	+	175	1	Intergenic	novelGene_6861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACTCATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102698409	102698584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102698400_102698600
ES.8306.4	chr12	+	1519	1	Genic_Genomic	ENSMUSG00000046675.8	novel	NA	NA	NA	NA	-39	-2320	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGCAGTCTTTAGAAAC	NA	False	NA	NA	False	AGTAAA	-13	NA	102709981	102711500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_102710000_102711500
ES.8306.5	chr12	+	691	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	-33	-2313	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTTTAGAAACTTGAATA	NA	False	NA	NA	False	AGTAAA	-20	NA	102709987	102711507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102710030_102710858
ES.8306.6	chr12	+	1323	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-31	2075	-31	-2075	multi-exon	FALSE	canonical	3	165	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTATCACCTTTCTGTT	NA	False	NA	86	True	NA	NA	NA	102709989	102711745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102710426_102710858
ES.8306.7	chr12	+	1594	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-24	1797	-24	-1797	multi-exon	FALSE	canonical	3	165	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTCTTTTCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	102709996	102712023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102710426_102710858
ES.8306.8	chr12	+	1664	1	Genic_Genomic	ENSMUSG00000046675.8	novel	NA	NA	NA	NA	-24	-2160	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTGCTTGCTTTAA	NA	False	NA	1	True	CATAAA	-16	NA	102709996	102711660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_102710000_102711700
ES.8307.1	chr12	+	3370	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	-103	-6	-103	6	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTCTTGGTCC	NA	False	NA	39	True	ATTAAA	-20	NA	102724122	102743972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.10	chr12	+	2144	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	14	1103	14	-1103	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTGTTCTGTCAGGAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	102724239	102742863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.11	chr12	+	3133	10	NIC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	26	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	198.086463226492	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGCTTTTCTGAT	NA	False	NA	27	True	ATTAAA	-8	NA	102724251	102743960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102724438_102727629_102727764_102728179_102728241_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.12	chr12	+	2284	11	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	28	-859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	188.637774583989	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTCTTTCAGATGGT	NA	False	NA	NA	False	TATAAA	-13	NA	102724253	102743107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736113_102737477_102737540_102741952
ES.8307.14	chr12	+	4860	10	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_8	198.134073574212	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724254	102743966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102734538_102735352_102735503_102736039_102736113_102737477_102737540_102741952
ES.8307.17	chr12	+	3439	11	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	36	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.691924317733	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGCTTTTCTGAT	NA	False	NA	27	True	ATTAAA	-8	NA	102724261	102743960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102724658_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.18	chr12	+	3156	10	NIC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	37	-6	combination_of_known_splicesites	FALSE	canonical	1	1	junction_9	197.38906870555	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGCTTTTCTGAT	NA	False	NA	27	True	ATTAAA	-8	NA	102724262	102743960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102741952
ES.8307.19	chr12	+	4551	11	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	37	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.691924317733	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGCTTTTCTGAT	NA	False	NA	27	True	ATTAAA	-8	NA	102724262	102743960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102725771_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.2	chr12	+	1436	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	-26	1851	-26	-1851	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCCCCTTTCCATCC	NA	False	NA	4	True	AATAAA	-15	NA	102724199	102742115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.20	chr12	+	4940	10	NIC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	37	-2	intron_retention	FALSE	canonical	3	541	junction_2	47.0864715440554	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCTTTTCTGATTGTT	NA	False	NA	31	True	ATTAAA	-12	NA	102724262	102743964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.22	chr12	+	7191	9	NIC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	40	-2	intron_retention	FALSE	canonical	3	541	junction_2	48.0245705342588	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCTTTTCTGATTGTT	NA	False	NA	31	True	ATTAAA	-12	NA	102724265	102743964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102732121_102732504_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.24	chr12	+	3202	11	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.691924317733	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724277	102743966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102724438_102727636_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.26	chr12	+	5937	10	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	514	2	514	-2	3prime_fragment	FALSE	canonical	3	541	junction_1	43.8456890063829	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGCTTTTCTGATTGTT	NA	False	NA	31	True	ATTAAA	-12	NA	102724739	102743964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.27	chr12	+	5875	4	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	11962	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	303.113106868633	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	5478	False	NA	33	True	ATTAAA	-14	NA	102736187	102743966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102736203_102737477_102738457_102738958_102741356_102741482
ES.8307.28	chr12	+	2083	2	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	13251	-6	13251	6	3prime_fragment	FALSE	canonical	3	611	junction_1	0	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTCTTGGTCC	6767	False	NA	39	True	ATTAAA	-20	NA	102737476	102743972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_102737540_102741952
ES.8307.3	chr12	+	2430	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	-24	855	-24	-855	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTTCAGATGGTGTGA	NA	False	NA	NA	False	TATAAA	-17	NA	102724201	102743111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ES.8307.4	chr12	+	3194	11	NNC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	-24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	188.637774583989	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTTTTCTGATTGTTC	NA	False	NA	32	True	ATTAAA	-13	NA	102724201	102743965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736113_102737477_102737540_102741952
ES.8307.6	chr12	+	3176	1	Genic_Genomic	ENSMUSG00000041712.8	novel	NA	NA	NA	NA	-6	-16571	mono-exon	FALSE	NA	NA	NA	NA	NA	445	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTATTAATCTTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	102724219	102727395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_102724200_102727400
ES.8308.1	chr12	-	3135	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-217	0	-217	0	multi-exon	FALSE	canonical	3	205	junction_5	27.4851250454756	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2190	False	NA	-1	True	AATAAA	-20	NA	102671406	102534840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.12	chr12	-	3086	10	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	101.634178172697	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGTACGTGGTCACA	2385	False	NA	-4	True	AATAAA	-17	NA	102671211	102534843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102642628_102642803_102670980
ES.8308.13	chr12	-	2871	9	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.2632967975391	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCTGTACGTGGTCAC	2448	False	NA	-5	True	AATAAA	-16	NA	102671148	102534844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589688_102670960
ES.8308.14	chr12	-	2973	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	101.671825005751	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCATTCTGTACGTGGTCA	2397	False	NA	-6	True	AATAAA	-15	NA	102671199	102534845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102539828_102539879_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.15	chr12	-	2775	9	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	9183	-8	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_8	79.0929042329336	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGCATTCTGTACGTGG	NA	False	NA	-9	True	AATAAA	-12	NA	102598010	102534848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102597911
ES.8308.16	chr12	-	3114	12	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	114.683250450466	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGCATTCTGTACGTGG	2406	False	NA	-9	True	AATAAA	-12	NA	102671190	102534848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102546539_102546666_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102662385_102662463_102670980
ES.8308.18	chr12	-	3023	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-4	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	100.647106267393	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACCGCATTCTGTACGT	2419	False	NA	-11	True	AATAAA	-10	NA	102671177	102534850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102634645_102634773_102641701_102641727_102670980
ES.8308.19	chr12	-	1528	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	-58	1448	-58	-1448	multi-exon	FALSE	canonical	3	205	junction_5	27.4851250454756	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTCTCTGTTTTAATTT	2349	False	NA	-2	True	NA	NA	NA	102671247	102536288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.2	chr12	-	3064	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	97.2501928018654	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2387	False	NA	-1	True	AATAAA	-20	NA	102671209	102534840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102546539_102546666_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.20	chr12	-	1240	9	Fusion	ENSMUSG00000057963.10_ENSMUSG00000096751.4	novel	421	5	NA	NA	-29	-6592	multi-exon	FALSE	canonical	0	0	junction_1	87.3318920841636	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTTGTGTGTGGAGCT	2378	False	NA	NA	False	AATAAA	-10	NA	102671218	102541432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_102541792_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.21	chr12	-	4878	4	ISM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	1	33106	1	-13182	5prime_fragment	FALSE	canonical	3	272	junction_1	4.08248290463863	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTCTGCTTTACACCAG	2408	False	NA	NA	False	NA	NA	NA	102671188	102567946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.22	chr12	-	144	1	Intergenic	novelGene_6855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTAGGTGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	102592533	102592389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102592400_102592500
ES.8308.23	chr12	-	3661	2	Intergenic	novelGene_6856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102600472	102596749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102597713_102597774
ES.8308.3	chr12	-	2898	10	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	83.0672789942356	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2405	False	NA	-1	True	AATAAA	-20	NA	102671191	102534840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554790_102572337_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.4	chr12	-	3143	12	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	110.632143043422	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2386	False	NA	-1	True	AATAAA	-20	NA	102671210	102534840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102662385_102662463_102662662_102662790_102670980
ES.8308.5	chr12	-	3094	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	103.415134288942	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTACGTGGTCACAGT	2419	False	NA	-2	True	AATAAA	-19	NA	102671177	102534841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102555774_102555964_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ES.8308.6	chr12	-	2893	9	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	-6506	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	102.836034540428	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTACGTGGTCACAGT	NA	False	NA	-2	True	AATAAA	-19	NA	102677695	102534841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102674391_102674644_102677611
ES.8308.8	chr12	-	2929	11	Fusion	ENSMUSG00000057963.10_ENSMUSG00000100006.2	novel	2918	10	NA	NA	41	-1	multi-exon	FALSE	canonical	0	0	junction_9	100.032994556796	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTACGTGGTCACAGT	2238	False	NA	-2	True	AATAAA	-19	NA	102693540	102534841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102686310_102686454_102693462
ES.8308.9	chr12	-	2744	9	NIC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	132	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	82.2632967975391	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTACGTGGTCACAGT	2555	False	NA	-2	True	AATAAA	-19	NA	102671041	102534841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102670980
ES.8309.1	chr12	-	3819	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	869	-1893	869	1893	multi-exon	FALSE	canonical	3	96	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACACTACTGGAGAGAA	6359	False	NA	NA	False	NA	NA	NA	102724062	102706097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102709654_102723799
ES.8309.11	chr12	-	974	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	-23	201	-20	-201	multi-exon	FALSE	canonical	3	237	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATGAT	6339	False	NA	NA	False	NA	NA	NA	102724082	102719734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102720426_102723799
ES.8309.12	chr12	-	777	1	NIC	ENSMUSG00000041716.8	novel	2795	2	NA	NA	858	-15306	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTTTGGTATTCTTAAA	6348	False	NA	NA	False	AGTAAA	-18	NA	102724073	102723296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_102723300_102724100
ES.8309.13	chr12	-	1676	1	Genic_Genomic	ENSMUSG00000098530.2_ENSMUSG00000091931.6_ENSMUSG00000041716.8	novel	NA	NA	NA	NA	-370	-1086	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCGT	5120	False	NA	NA	False	NA	NA	NA	102725301	102723625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_102723600_102725300
ES.8309.2	chr12	-	2636	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	199	-40	199	40	multi-exon	FALSE	canonical	3	96	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATTTTTTGGCTTTG	5689	False	NA	17	True	AATAAA	-42	NA	102724732	102707950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102709654_102723799
ES.8309.3	chr12	-	1792	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	-17	-491	-17	491	multi-exon	FALSE	canonical	3	30	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATTTGATCTTTG	NA	False	NA	-30	True	AATAAA	-9	NA	102709937	102707997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102709654_102709801
ES.8309.4	chr12	-	1409	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	31	-156	15	156	multi-exon	FALSE	canonical	3	30	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGATAATTATTTAAAT	NA	False	NA	NA	False	GATAAA	-15	NA	102709889	102708332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102709654_102709801
ES.8309.5	chr12	-	1439	1	Intergenic	novelGene_6862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGTTTGAAGAATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	102715262	102713823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102713800_102715300
ES.8309.6	chr12	-	1923	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	-763	-8	-760	8	multi-exon	FALSE	canonical	3	237	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCCTCTTTTTTTTTA	5599	False	NA	7	True	AATAAA	-28	NA	102724822	102719525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102720426_102723799
ES.8309.7	chr12	-	962	3	NNC	ENSMUSG00000091931.6	novel	1152	2	NA	NA	-10	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	118.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTCTGTAGCCTCT	6349	False	NA	-2	True	AATAAA	-19	NA	102724072	102719534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102719714_102719915_102720426_102723799
ES.8309.8	chr12	-	4295	2	NNC	ENSMUSG00000091931.6	novel	1152	2	NA	NA	27	-1	intron_retention	TRUE	non_canonical	0	0	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTTTCTGTAGCCTCT	6389	False	NA	-2	True	AATAAA	-19	NA	102724032	102719534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102719711_102719913
ES.831.1	chr1	+	463	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78558907	78559370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78558900_78559400
ES.8310.1	chr12	+	183	1	Antisense	novelGene_ENSMUSG00000041702.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGTGAGGA	NA	False	NA	NA	False	NA	NA	NA	102770473	102770656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102770500_102770700
ES.8311.1	chr12	+	3141	1	Intergenic	novelGene_6863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATACATGCAGGCTAGAAG	NA	False	NA	NA	False	NA	NA	NA	102781491	102784632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102781500_102784600
ES.8311.2	chr12	+	179	1	Intergenic	novelGene_6864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	102782733	102782912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_102782700_102782900
ES.8312.1	chr12	+	6965	2	Antisense	novelGene_ENSMUSG00000041702.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCAAATACATTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	102785133	102792313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_102788117_102788331
ES.8313.1	chr12	-	8013	11	NNC	ENSMUSG00000041702.8	novel	4035	11	NA	NA	-6	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.293990641365	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGACATAGTCTGTT	NA	False	NA	-8	True	AATAAA	-19	NA	102844673	102747051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806544_102844474
ES.8313.10	chr12	-	5969	4	NIC	ENSMUSG00000041702.8	novel	4035	11	NA	NA	-5	-3	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	28.5929284186765	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCTGAGTTGGACATA	NA	False	NA	-15	True	AATAAA	-12	NA	102844672	102747058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_102752192_102754193_102754644_102806358_102806547_102844474
ES.8313.11	chr12	-	7689	11	NNC	ENSMUSG00000041702.8	novel	4035	11	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6232181618796	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCTGAGTTGGACATA	NA	False	NA	-15	True	AATAAA	-12	NA	102844675	102747058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102752192_102754193_102754322_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ES.8313.12	chr12	-	1839	1	ISM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	95598	173	57473	-173	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGAACTCGTCTGTGT	8722	False	NA	NA	False	AATATA	-25	NA	102749067	102747228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_102747200_102749100
ES.8313.13	chr12	-	6010	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-161	-1814	-31	1814	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTCGTAGTCTTATT	NA	False	NA	NA	False	AGTAAA	-4	NA	102844698	102749082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ES.8313.14	chr12	-	5257	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-34	2934	31	907	multi-exon	FALSE	canonical	3	7	junction_10	26.1040511722473	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAGCACCATTTGAACA	NA	False	NA	NA	False	AATATA	-23	NA	102844699	102749989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ES.8313.15	chr12	-	5128	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-64	3093	1	748	multi-exon	FALSE	canonical	3	7	junction_10	26.1040511722473	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGATGCTGGTTTGGTG	NA	False	NA	NA	False	AGTAAA	-27	NA	102844729	102750148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ES.8313.16	chr12	-	4238	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-208	5	-15	-5	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACGCTCCTCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	102844745	102750901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ES.8313.17	chr12	-	4364	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-57	3850	8	-9	multi-exon	FALSE	canonical	3	7	junction_10	26.1040511722473	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAAACGCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	102844722	102750905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ES.8313.18	chr12	-	2483	9	NNC	ENSMUSG00000041702.8	novel	6886	5	NA	NA	17	-7914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.0471430506555	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGACTGTCTAACTGC	NA	False	NA	NA	False	NA	NA	NA	102844713	102758810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102759007_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ES.8313.19	chr12	-	6081	7	NNC	ENSMUSG00000041702.8	novel	6886	5	NA	NA	-15	-874	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.5934141601407	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAACCAAGACGGC	NA	False	NA	NA	False	AATAAA	-16	NA	102844745	102769854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102770458_102770665_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ES.8313.2	chr12	-	8228	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	-68	-3	-3	3	multi-exon	FALSE	canonical	3	7	junction_10	26.1040511722473	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGGACATAGTCTGT	NA	False	NA	-9	True	AATAAA	-18	NA	102844733	102747052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ES.8313.20	chr12	-	3457	3	FSM	ENSMUSG00000041702.8	ENSMUST00000221376.2	3509	3	48	4	-15	-4	multi-exon	FALSE	canonical	3	63	junction_2	9	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGATTGGTATATCTTT	NA	False	NA	NA	False	NA	NA	NA	102844682	102801895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_102804957_102806358_102806547_102844474
ES.8313.5	chr12	-	8158	13	NNC	ENSMUSG00000041702.8	novel	8157	12	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.9335247036715	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	-12	True	AATAAA	-15	NA	102844671	102747055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102788388_102788476_102802630_102802692_102803876_102804957_102806358_102806547_102844474
ES.8313.6	chr12	-	8175	12	NNC	ENSMUSG00000041702.8	novel	8157	12	NA	NA	-47	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	27.6749133051267	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGCTGAGTTGGACATAG	NA	False	NA	-14	True	AATAAA	-13	NA	102844777	102747057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102802630_102802692_102803876_102804957_102806358_102806547_102844474
ES.8313.8	chr12	-	6129	9	NNC	ENSMUSG00000041702.8	novel	4035	11	NA	NA	2033	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	34.0541847648714	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGCTGAGTTGGACATAG	NA	False	NA	-14	True	AATAAA	-13	NA	102804507	102747057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_102751536_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102802630_102802692_102803876
ES.8313.9	chr12	-	6769	9	NIC	ENSMUSG00000041702.8	novel	4035	11	NA	NA	29	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	25.219040425837	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGCTGAGTTGGACATA	NA	False	NA	-15	True	AATAAA	-12	NA	102844701	102747058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102844474
ES.8314.1	chr12	-	138	1	Intergenic	novelGene_6865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTTGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	102879880	102879742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_102879700_102879900
ES.8315.1	chr12	+	3018	11	NIC	ENSMUSG00000021198.17	novel	7762	47	NA	NA	10843	-14991	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.3	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATTTTATTTATTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	103036180	103062541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_103036468_103037000_103037125_103038918_103039060_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216
ES.8316.1	chr12	-	3412	5	FSM	ENSMUSG00000041669.16	ENSMUST00000074416.10	909	5	-49	-2454	-49	2454	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTGTCACTGTTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	103208458	103160712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103163611_103168907_103169038_103201844_103201981_103207598_103207722_103208333
ES.8316.2	chr12	-	1582	6	NNC	ENSMUSG00000041669.16	novel	1076	6	NA	NA	-569	2452	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.16619037896906	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGGCTGTCACTGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	103208978	103160714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103161176_103163369_103163611_103168907_103169038_103201844_103201981_103207598_103207722_103208487
ES.8317.1	chr12	-	1224	3	NNC	ENSMUSG00000021200.15	novel	2399	6	NA	NA	10035	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGCCCTGTGATTCC	NA	False	NA	-4	True	AATAAA	-13	NA	103291808	103287402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103287934_103290021_103290176_103291269
ES.8317.3	chr12	-	2114	7	NNC	ENSMUSG00000021200.15	novel	2283	8	NA	NA	-524	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.54666899441312	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTGCCCTGTGATT	NA	False	NA	-6	True	AATAAA	-11	NA	103302367	103287404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103287934_103290025_103290176_103291311_103291874_103296603_103296776_103299550_103299797_103301107_103301264_103302068
ES.8317.4	chr12	-	1204	1	NIC	ENSMUSG00000021200.15	novel	2690	10	NA	NA	10053	-3182	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGGATCAGTCACAGAA	NA	False	NA	NA	False	AATAAA	-23	NA	103291790	103290586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103290600_103291800
ES.8318.1	chr12	+	2832	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	-36	-5	-20	0	multi-exon	FALSE	canonical	3	84	junction_1	8.60232526704263	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGCTTCTTAATGTTG	8140	False	NA	NA	False	ATTAAA	-21	NA	103354920	103372609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
ES.8318.2	chr12	+	3162	5	FSM	ENSMUSG00000021203.16	ENSMUST00000141055.2	3055	5	-104	-3	-20	-2	multi-exon	FALSE	canonical	3	84	junction_1	9.35414346693485	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGGCTTCTTAATGT	8140	False	NA	NA	False	ATTAAA	-19	NA	103354920	103372607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484
ES.8318.3	chr12	+	3609	5	FSM	ENSMUSG00000021203.16	ENSMUST00000141055.2	3055	5	-93	-461	-9	456	multi-exon	FALSE	canonical	3	84	junction_1	9.35414346693485	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACACTATGACCTCATAG	8151	False	NA	NA	False	NA	NA	NA	103354931	103373065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484
ES.8318.4	chr12	+	2782	6	NIC	ENSMUSG00000021203.16	novel	424	4	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	32.5047688808888	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8420	False	NA	NA	False	ATTAAA	-16	NA	103355200	103372604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
ES.8318.5	chr12	+	6318	2	ISM	ENSMUSG00000021203.16	ENSMUST00000179684.3	2890	6	6711	11	6711	0	intron_retention	FALSE	canonical	3	85	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTGTCAGTCTGGCT	NA	False	NA	NA	False	ATTAAA	-10	NA	103365623	103372598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_103366551_103367207
ES.8319.1	chr12	-	8863	9	FSM	ENSMUSG00000055271.6_ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-29	-5984	-18	4824	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTCCTGTCTAGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	103392107	103368256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.12	chr12	-	3154	9	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	280.319878665427	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392057	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390940_103391795
ES.8319.14	chr12	-	2811	10	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	264.313366206773	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392081	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390323_103390364_103390857_103392037
ES.8319.16	chr12	-	2722	9	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	278.344407838562	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392076	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390731_103392037
ES.8319.17	chr12	-	2670	1	FSM	ENSMUSG00000041645.15	ENSMUST00000222715.2	1646	1	261	-1285	261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	5681	False	NA	-12	True	ATTAAA	-20	NA	103376910	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103374200_103376900
ES.8319.18	chr12	-	3947	8	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	750	junction_7	42.3450356100491	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392104	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103374737_103376186_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.2	chr12	-	4012	9	FSM	ENSMUSG00000055271.6_ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-3	-1159	2	-1	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCATAGTGTATCTTTT	NA	False	NA	NA	False	TTTAAA	-19	NA	103392081	103373081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.21	chr12	-	7406	4	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	-778	0	intron_retention	FALSE	canonical	3	805	junction_3	37.1513421321791	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	7183	False	NA	-12	True	ATTAAA	-20	NA	103384372	103374240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103374737_103376186_103382531_103383536_103384053_103384322
ES.8319.22	chr12	-	4290	8	FSM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	13	-1634	8	-1	multi-exon	FALSE	canonical	3	750	junction_7	42.8480942828671	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGAGGGTGTTGCAG	NA	False	NA	-14	True	ATTAAA	-18	NA	103392070	103374242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.23	chr12	-	2830	9	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	277.220467317981	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGAGGGTGTTGCAG	NA	False	NA	-14	True	ATTAAA	-18	NA	103392070	103374242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374735_103376194_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.24	chr12	-	2860	9	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	278.200214548803	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGAGGGTGTTGCAG	NA	False	NA	-14	True	ATTAAA	-18	NA	103392078	103374242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382442_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.25	chr12	-	3217	10	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	-15	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	347.458426325642	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCTGAGGGTGTTGCA	NA	False	NA	-15	True	ATTAAA	-17	NA	103392104	103374243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103378676_103379021_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.28	chr12	-	3099	8	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_4	291.063566940282	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACATCCTGAGGGTGTT	NA	False	NA	-18	True	ATTAAA	-14	NA	103392083	103374246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382511_103383536_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.3	chr12	-	2948	9	FSM	ENSMUSG00000055271.6_ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	-91	-7	-80	7	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTGCAGTGTTTTATC	NA	False	NA	-5	True	ATTAAA	-27	NA	103392169	103374233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.30	chr12	-	3090	9	NNC	ENSMUSG00000041645.15	novel	3063	9	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	277.685945584216	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGACATCCTGAGGGTG	NA	False	NA	-20	True	ATTAAA	-12	NA	103392084	103374248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391795
ES.8319.32	chr12	-	2760	8	FSM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	-21	-70	-15	70	multi-exon	FALSE	canonical	3	750	junction_7	42.8480942828671	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGTCATTTATCATGGT	NA	False	NA	NA	False	ACTAAA	-45	NA	103392104	103375806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.33	chr12	-	2799	7	Fusion	ENSMUSG00000041645.15_ENSMUSG00000113328.2	novel	4274	2	NA	NA	-78	405	multi-exon	FALSE	canonical	0	0	junction_1	310.078708645975	634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATTGTCTTCTTTACA	NA	False	NA	NA	False	GATAAA	-19	NA	103392167	103378345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_103379021_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.34	chr12	-	2872	6	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	-7	5753	-1	5005	5prime_fragment	FALSE	canonical	3	750	junction_5	48.7918025901893	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCAAGGTTAAAACACAT	NA	False	NA	NA	False	NA	NA	NA	103392090	103381629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ES.8319.5	chr12	-	2811	10	NNC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	-2	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	264.313366206773	646	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTGTTGCAGTGTTTT	NA	False	NA	-8	True	ATTAAA	-24	NA	103392091	103374236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390326_103390381_103390857_103392037
ES.8319.6	chr12	-	7691	7	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	1182	3	intron_retention	FALSE	canonical	3	805	junction_4	29.963403604323	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGGTGTTGCAGTGTTT	698	False	NA	-9	True	ATTAAA	-23	NA	103390857	103374237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103374737_103376186_103376317_103377387_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130
ES.8319.7	chr12	-	3055	9	NIC	ENSMUSG00000041645.15	novel	3063	9	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	276.698278816475	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	-11	True	ATTAAA	-21	NA	103392090	103374239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391845
ES.8319.9	chr12	-	3099	9	FSM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	-34	-2	5	1	multi-exon	FALSE	canonical	1	1	junction_8	279.990624843047	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGGTGTTGCAGTGT	NA	False	NA	-11	True	ATTAAA	-21	NA	103392073	103374239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391784
ES.832.1	chr1	-	2553	5	NNC	ENSMUSG00000099364.3	novel	2091	2	NA	NA	2884	174	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.82915619758885	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTCACCCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	78585194	78571488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78573492_78573896_78573983_78574076_78574178_78574423_78574504_78584911
ES.832.2	chr1	-	2315	5	NNC	ENSMUSG00000099364.3	novel	2091	2	NA	NA	55	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGACACAGCAGTTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	78588023	78571650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_78573492_78573896_78573983_78574076_78574178_78574423_78574504_78587816
ES.832.3	chr1	-	171	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	78584693	78584522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_78584500_78584700
ES.832.4	chr1	-	172	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	NA	False	NA	NA	False	NA	NA	NA	78586372	78586200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_78586200_78586400
ES.8320.1	chr12	+	1027	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	-50	0	-2	0	multi-exon	FALSE	canonical	1	4	junction_4	6.23832242407097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	6584	False	NA	5	True	AATAAA	-19	NA	103400467	103406498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ES.8320.2	chr12	+	1840	5	NIC	ENSMUSG00000064215.14	novel	977	7	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	15	junction_1	1.92028643696715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCATTGTTCCCCTTT	6628	False	NA	4	True	AATAAA	-18	NA	103400511	103406497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_103400610_103401680_103401833_103402821_103403965_103405659_103405822_103406212
ES.8321.1	chr12	-	177	1	Intergenic	novelGene_6866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	103486661	103486484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_103486500_103486700
ES.8322.1	chr12	+	3816	25	FSM	ENSMUSG00000021209.13	ENSMUST00000021631.12	3964	25	147	1	-140	-1	multi-exon	FALSE	canonical	0	0	junction_4	1.55232800084976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGTATTTGTGAGAAA	NA	False	NA	NA	False	AATAAA	-16	NA	103498688	103580089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103542539_103542688_103543093_103543168_103545250_103545358_103547637_103547746_103550314_103550437_103551965_103552089_103553209_103553380_103553695_103553816_103557037_103557116_103557785_103557870_103559254_103559438_103562649_103562756_103564359_103564508_103566622_103566768_103567621_103567664_103567746_103567822_103569209_103569280_103570230_103570318_103571225_103571320_103573159_103573231_103576791_103576940_103579066
ES.8322.2	chr12	+	4148	25	NNC	ENSMUSG00000021209.13	novel	3964	25	NA	NA	17	-3	intron_retention	FALSE	canonical	0	0	junction_4	1.58058972819922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCTGTATTTGTGAGA	NA	False	NA	NA	False	AATAAA	-14	NA	103498845	103580087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_103499002_103500329_103500404_103524626_103524730_103542539_103542688_103543093_103543168_103545250_103545358_103547637_103547746_103550314_103550437_103551965_103552089_103553209_103553380_103553695_103553816_103557037_103557116_103557785_103557870_103559254_103559438_103562649_103562756_103564359_103564508_103566622_103566768_103567621_103567664_103567746_103567822_103569209_103570318_103571225_103571320_103573159_103573231_103576791_103576940_103579066_103579252_103579711
ES.8323.1	chr12	-	180	1	Intergenic	novelGene_6867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAATTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	103518746	103518566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_103518600_103518700
ES.8324.1	chr12	-	1521	5	FSM	ENSMUSG00000071178.12	ENSMUST00000186166.7	1762	5	239	2	239	0	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTTGACTCTGTGGGT	7608	False	NA	NA	False	ATTAAA	-36	NA	103706535	103694416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_103694693_103695489_103695641_103696508_103696780_103698219_103698852_103706344
ES.8325.1	chr12	+	1055	2	Fusion	ENSMUSG00000041449.17_ENSMUSG00000066363.13	novel	2042	5	NA	NA	3723	736	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAGAGTGTTCACAGA	NA	False	NA	10	True	AATAAA	-16	NA	104184614	104220664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104184739_104219733
ES.8325.10	chr12	+	3412	3	NIC	ENSMUSG00000041449.17	novel	1239	4	NA	NA	-23	730	intron_retention	FALSE	canonical	3	40	junction_2	8	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGAATGTGAGAGTGTT	NA	False	NA	4	True	AATAAA	-10	NA	104214140	104220658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104214232_104216398_104218005_104218943
ES.8325.11	chr12	+	2223	5	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041449.17	novel	1239	4	NA	NA	-22	300	multi-exon	FALSE	canonical	2	3	junction_3	10.4522724801834	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCACAGAGTTTGTCAA	NA	False	NA	NA	False	GATAAA	-14	NA	104214141	104235931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104214232_104230560_104230695_104231352_104231972_104233914_104234066_104234702
ES.8325.12	chr12	+	2761	4	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-6	735	intron_retention	FALSE	canonical	3	40	junction_2	8.33999733546454	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGAGAGTGTTCACAG	NA	False	NA	9	True	AATAAA	-15	NA	104214157	104220663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104214232_104216398_104218005_104218943_104219095_104219733
ES.8325.13	chr12	+	1042	4	FSM	ENSMUSG00000041449.17	ENSMUST00000116393.3	1226	4	111	73	111	-73	multi-exon	FALSE	canonical	3	40	junction_2	12.3917535302941	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGATGATTATCTCTG	1978	False	NA	NA	False	AATATA	-13	NA	104216521	104219855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_104217017_104217730_104218005_104218943_104219095_104219733
ES.8325.14	chr12	+	2151	3	ISM	ENSMUSG00000079014.5	ENSMUST00000109958.3	2200	6	-15	2370	-15	1266	intron_retention	FALSE	canonical	3	28	junction_2	1	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCACAGGGATTGTGA	NA	False	NA	NA	False	NA	NA	NA	104229365	104233261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_104229474_104230560_104230695_104231352
ES.8325.15	chr12	+	1431	6	FSM	ENSMUSG00000079014.5	ENSMUST00000109958.3	2200	6	-14	783	-14	-783	multi-exon	FALSE	canonical	0	0	junction_3	10.7256701422335	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCACATTGCCCTCT	NA	False	NA	NA	False	AATATA	-37	NA	104229366	104234848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_104229474_104230560_104230695_104231352_104231972_104232703_104232978_104233914_104234066_104234702
ES.8325.16	chr12	+	2130	5	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	0	-802	intron_retention	FALSE	canonical	3	17	junction_3	5.11737237261468	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATTATCTCTGACATA	NA	False	NA	NA	False	AATATA	-18	NA	104229380	104234829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104229474_104230560_104230695_104231352_104232978_104233914_104234066_104234702
ES.8325.17	chr12	+	1774	4	NNC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	0	-807	intron_retention	FALSE	canonical	3	6	junction_2	9.97775303139718	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTGATAATTATCTCTG	NA	False	NA	NA	False	AATATA	-13	NA	104229380	104234824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104229474_104230560_104231972_104233917_104234066_104234702
ES.8325.18	chr12	+	2309	2	NIC	ENSMUSG00000079014.5	novel	2200	6	NA	NA	2481	-789	intron_retention	FALSE	canonical	3	22	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATAAATACTCACATTG	NA	False	NA	NA	False	AATATA	-31	NA	104231896	104234842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104234066_104234702
ES.8325.2	chr12	+	901	2	Fusion	ENSMUSG00000041449.17_ENSMUSG00000066363.13	novel	2042	5	NA	NA	5604	734	multi-exon	TRUE	non_canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTGAGAGTGTTCACA	NA	False	NA	8	True	AATAAA	-14	NA	104186495	104220662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104186506_104219771
ES.8325.3	chr12	+	1428	6	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	1945	5	NA	NA	-13	-766	multi-exon	FALSE	canonical	0	0	junction_3	9.65401470891774	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCATGGCCAAAGTTACA	NA	False	NA	NA	False	CATAAA	-15	NA	104202490	104234865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104202578_104230560_104230695_104231352_104231972_104232703_104232978_104233914_104234066_104234702
ES.8325.4	chr12	+	2994	5	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	1945	5	NA	NA	-11	70	intron_retention	FALSE	canonical	3	17	junction_3	3.90512483795333	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTGTGACTCCTGTGA	NA	False	NA	NA	False	NA	NA	NA	104202492	104235701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104202578_104230560_104230695_104231352_104232978_104233914_104234066_104234702
ES.8325.5	chr12	+	1809	5	NIC	ENSMUSG00000041481.18	novel	1945	5	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.69985632065266	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGACAGTGTTCACAGA	NA	False	NA	NA	False	AATAAA	-16	NA	104202502	104208196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104202578_104204196_104204604_104205293_104205568_104206505_104206657_104207294
ES.8325.6	chr12	+	1901	5	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	1945	5	NA	NA	2	-1	multi-exon	FALSE	canonical	3	6	junction_3	8.25757228245687	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTTCACAGAACTTCC	NA	False	NA	NA	False	GATAAA	-22	NA	104202505	104235630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104202578_104230560_104230695_104231352_104231972_104233917_104234066_104234702
ES.8325.7	chr12	+	2243	6	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	1945	5	NA	NA	0	72	multi-exon	FALSE	canonical	0	0	junction_3	11.4087685575613	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGACTCCTGTGATG	NA	False	NA	NA	False	NA	NA	NA	104202510	104235703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104202578_104230560_104230695_104231352_104231972_104232703_104232978_104233917_104234066_104234702
ES.8325.8	chr12	+	3915	4	Fusion	ENSMUSG00000079014.5_ENSMUSG00000041481.18	novel	830	4	NA	NA	1	73	intron_retention	FALSE	canonical	3	22	junction_3	2.62466929133727	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGACTCCTGTGATGG	NA	False	NA	NA	False	NA	NA	NA	104202511	104235704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_104202578_104230560_104230695_104231352_104234066_104234702
ES.8325.9	chr12	+	2176	5	NIC	ENSMUSG00000041449.17	novel	1226	4	NA	NA	-128	742	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	10.7325439668328	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTTCACAGAGCTTCT	NA	False	NA	16	True	AATAAA	-22	NA	104214035	104220670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104214232_104216398_104217017_104217730_104218005_104218943_104219095_104219733
ES.8326.1	chr12	+	3208	1	Intergenic	novelGene_6868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAGACTGCCTCTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	104236014	104239222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104236000_104239200
ES.8327.1	chr12	+	5359	2	Intergenic	novelGene_6869	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTCCATTTT	639	False	NA	11	True	NA	NA	NA	104343707	104349131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104344989_104345053
ES.8327.10	chr12	+	1795	6	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9606	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	39.1734604036968	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACATCTGCTCTCAGC	748	False	NA	12	True	AATACA	-21	NA	104343816	104360510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104347004_104347092_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ES.8327.11	chr12	+	3228	2	Intergenic	novelGene_6872	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGGCTTTTGGTCTG	255	False	NA	NA	False	NA	NA	NA	104344471	104347764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104344989_104345053
ES.8327.12	chr12	+	3772	5	NNC	ENSMUSG00000079012.12	novel	1659	5	NA	NA	-704	-382	intron_retention	FALSE	non_canonical	0	0	junction_1	37.1643310177918	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGTGTTCAGACTACC	7165	False	NA	NA	False	NA	NA	NA	104352718	104360133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104352904_104352951_104355972_104357714_104357989_104358900_104359052_104359991
ES.8327.13	chr12	+	4443	4	NNC	ENSMUSG00000079012.12	novel	1659	5	NA	NA	197	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.8978113919839	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCAGCTTGCAGTCTTG	8066	False	NA	23	True	AATACA	-32	NA	104353619	104360521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104356847_104357453_104357989_104358900_104359052_104359991
ES.8327.14	chr12	+	3326	5	NNC	ENSMUSG00000079012.12	novel	1659	5	NA	NA	2028	2021	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	37.1643310177918	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAACGTCTTGCATGGTT	9897	False	NA	NA	False	NA	NA	NA	104355450	104362537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104355972_104357714_104357989_104358900_104359052_104359991_104360564_104360729
ES.8327.15	chr12	+	3625	2	NIC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	2512	-16	intron_retention	FALSE	canonical	3	91	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGCTCTGAGCACAT	NA	False	NA	1	True	AATACA	-10	NA	104355934	104360499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_104359052_104359991
ES.8327.16	chr12	+	1530	3	ISM	ENSMUSG00000079012.12	ENSMUST00000168797.2	1659	5	3711	1	3711	0	3prime_fragment	FALSE	canonical	3	91	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGCTCTCAGCTTGCA	NA	False	NA	17	True	AATACA	-26	NA	104357133	104360515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_104357989_104358900_104359052_104359991
ES.8327.2	chr12	+	1824	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9714	2	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTCAGCTTGCAGTC	640	False	NA	20	True	AATACA	-29	NA	104343708	104360518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ES.8327.3	chr12	+	1160	4	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9695	6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.9550023504018	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGCTTGCAGTCTTGA	659	False	NA	24	True	AATACA	-33	NA	104343727	104360522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104357714_104357989_104358900_104359052_104359991
ES.8327.4	chr12	+	5499	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9694	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.1643310177918	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTGAGCACATCTGCT	660	False	NA	6	True	AATACA	-15	NA	104343728	104360504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104347641_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ES.8327.5	chr12	+	396	2	Intergenic	novelGene_6870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTCTTGGCTCCA	660	False	NA	7	True	NA	NA	NA	104343728	104349127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104343932_104348934
ES.8327.6	chr12	+	3780	6	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9694	2144	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	33.4687914332143	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCCATTCTTCCTTGC	660	False	NA	NA	False	AAGAAA	-10	NA	104343728	104362660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991_104360564_104360729
ES.8327.7	chr12	+	2677	4	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9674	-16	intron_retention	FALSE	canonical	3	63	junction_2	11.7756811551038	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGCTCTGAGCACAT	680	False	NA	1	True	AATACA	-10	NA	104343748	104360499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104355322_104355972_104357714_104359052_104359991
ES.8327.8	chr12	+	4024	3	Intergenic	novelGene_6871	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTTGGCTCCATTTT	680	False	NA	11	True	NA	NA	NA	104343748	104349131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104344989_104345053_104347641_104348934
ES.8327.9	chr12	+	1793	6	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9669	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.8245024464475	85	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAGGCTCTGAGCACAT	685	False	NA	1	True	AATACA	-10	NA	104343753	104360499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_104343932_104347607_104347641_104355322_104355972_104357714_104357989_104358900_104359052_104359991
ES.8328.1	chr12	+	2026	5	Intergenic	novelGene_6873	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCATGTGTGTATGCT	NA	False	NA	NA	False	AATAAA	-15	NA	104399614	104407492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104399862_104400026_104400217_104401562_104401679_104402998_104403255_104406275
ES.8328.2	chr12	+	2827	5	Intergenic	novelGene_6874	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGCTCTATAAGACCA	NA	False	NA	NA	False	AATAAA	-26	NA	104399695	104406227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104399862_104400026_104400217_104401562_104401679_104402998_104403162_104404035
ES.8328.3	chr12	+	5162	4	Intergenic	novelGene_6875	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACAACATGCTTACATAT	NA	False	NA	NA	False	NA	NA	NA	104399729	104407742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104399842_104400026_104400217_104401562_104401679_104402998
ES.8328.4	chr12	+	3707	2	Intergenic	novelGene_6876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGTGTGTATGCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	104400766	104407494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104403255_104406275
ES.8328.5	chr12	+	2631	3	Intergenic	novelGene_6877	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGCTCTATAAGACCA	NA	False	NA	NA	False	AATAAA	-26	NA	104401495	104406227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104401679_104402998_104403255_104404035
ES.8329.1	chr12	-	1226	3	FSM	ENSMUSG00000021095.6	ENSMUST00000021513.6	1268	3	35	7	35	-7	multi-exon	FALSE	canonical	3	74	junction_1	3	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGTTGTATTTCCTAC	NA	False	NA	-18	True	AATAAA	-19	NA	104439554	104437474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104437906_104438251_104438512_104439019
ES.833.1	chr1	+	192	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTTTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	78601420	78601612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78601400_78601600
ES.8330.1	chr12	+	3510	1	FSM	ENSMUSG00000114826.3	ENSMUST00000232932.2	4429	1	1	918	1	-648	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCGTCCTTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	104439590	104443100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_104439600_104443100
ES.8331.1	chr12	+	2537	1	Intergenic	novelGene_6878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTGTAGTTTG	NA	False	NA	NA	False	AATAAA	-37	NA	104505160	104507697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104505200_104507700
ES.8332.1	chr12	-	1573	4	Intergenic	novelGene_6879	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGCATGATGTTGGT	NA	False	NA	NA	False	AATAAA	-24	NA	104570527	104559610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104560487_104564141_104564378_104565230_104565480_104570315
ES.8332.2	chr12	-	1481	4	Intergenic	novelGene_6880	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTGGATTTACTGCAT	NA	False	NA	NA	False	AATAAA	-15	NA	104570222	104559619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104560487_104564141_104564378_104565230_104565480_104570093
ES.8333.1	chr12	-	175	1	Intergenic	novelGene_6881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104575340	104575165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104575200_104575300
ES.8334.1	chr12	+	697	1	Intergenic	novelGene_6882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTCGCTTTGATCTCT	NA	False	NA	NA	False	NA	NA	NA	104580761	104581458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104580800_104581500
ES.8335.1	chr12	-	388	2	Intergenic	novelGene_6883	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTTTGCTGGCTTAT	NA	False	NA	NA	False	ATTAAA	-25	NA	104626139	104624675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104624943_104626018
ES.8335.2	chr12	-	3383	3	Intergenic	novelGene_6884	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCATCTGTCTTTGCT	NA	False	NA	NA	False	ATTAAA	-18	NA	104634260	104624682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104627939_104628078_104628153_104634207
ES.8335.3	chr12	-	3489	4	Intergenic	novelGene_6885	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTATTCATCTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	104634246	104624688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104627939_104628078_104628153_104628871_104628998_104634207
ES.8336.1	chr12	-	10184	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-156	13	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTTTTTGTTTTAA	4254	False	NA	5	True	AATAAA	-29	NA	104718367	104653987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.10	chr12	-	8174	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-119	1531	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGATTCGTGCATTT	4291	False	NA	NA	False	TATAAA	-15	NA	104718330	104655960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.12	chr12	-	6608	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-151	-67	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTGTTTGTTTTGA	4259	False	NA	NA	False	TTTAAA	-17	NA	104718362	104657558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.13	chr12	-	6492	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-157	6	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTAGTTTTTGCGC	4253	False	NA	-20	True	AATAAA	-35	NA	104718368	104657680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.14	chr12	-	6759	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-135	4	intron_retention	FALSE	canonical	0	0	junction_23	73.5590402191273	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTTTAGTTTTTGC	4275	False	NA	-22	True	AATAAA	-33	NA	104718346	104657682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104696660_104696768_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.15	chr12	-	6800	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-145	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	58.1461367098943	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTTTAGTTTTTGC	4265	False	NA	-22	True	AATAAA	-33	NA	104718356	104657682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104717684
ES.8336.16	chr12	-	6485	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-141	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	58.1439430400527	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGTTTAGTTTTTGC	4269	False	NA	-22	True	AATAAA	-33	NA	104718352	104657682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695533_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.18	chr12	-	6333	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-157	3	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	58.3738483641391	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGGTTTAGTTTTTG	4253	False	NA	-23	True	AATAAA	-32	NA	104718368	104657683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.19	chr12	-	6310	27	FSM	ENSMUSG00000041415.12	ENSMUST00000041987.8	9851	27	-142	3683	-142	3	multi-exon	FALSE	canonical	3	28	junction_26	55.5751530194573	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGGTTTAGTTTTTG	4268	False	NA	-23	True	AATAAA	-32	NA	104718353	104657683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
ES.8336.2	chr12	-	10294	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_28	58.1461367098943	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTAGCTTTGTTTT	4456	False	NA	-5	True	AATAAA	-19	NA	104718165	104653997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104717684
ES.8336.20	chr12	-	6514	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-127	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	58.435774966354	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGGTTTAGTTTTTG	4283	False	NA	-23	True	AATAAA	-32	NA	104718338	104657683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690385_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.21	chr12	-	5494	25	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	74.9991550878334	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTGGTTTAGTTTTT	4441	False	NA	-24	True	AATAAA	-31	NA	104718180	104657684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
ES.8336.24	chr12	-	6304	30	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-122	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	71.0276026129066	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAATTTTGGTTTAGTT	4288	False	NA	-27	True	AATAAA	-28	NA	104718333	104657687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688561_104688630_104688703_104690160_104690330_104694591_104694677_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.25	chr12	-	6372	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-142	-1	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	53.666423842203	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAATTTTGGTTTAGTT	4268	False	NA	-27	True	AATAAA	-28	NA	104718353	104657687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.26	chr12	-	6333	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-118	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_23	58.2907473317146	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACTAATTTTGGTTT	4292	False	NA	-31	True	AATAAA	-24	NA	104718329	104657691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695413_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.27	chr12	-	5589	24	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	63.6104341644794	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACTAATTTTGGTTT	4396	False	NA	-31	True	AATAAA	-24	NA	104718225	104657691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695413_104718000
ES.8336.28	chr12	-	6516	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-124	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	58.4394309677698	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4286	False	NA	-34	True	AATAAA	-21	NA	104718335	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697207_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.29	chr12	-	6392	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-137	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	69.9618336185188	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4273	False	NA	-34	True	AATAAA	-21	NA	104718348	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658720_104660732_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698182_104704027_104704126_104705041_104705108_104718006
ES.8336.3	chr12	-	3470	2	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTCTTTAGCTTTGT	4284	False	NA	-8	True	AATAAA	-16	NA	104718337	104654000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104657284_104718150
ES.8336.30	chr12	-	6374	28	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-140	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	70.553971013606	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4270	False	NA	-34	True	AATAAA	-21	NA	104718351	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695533_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.31	chr12	-	4878	20	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-141	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	67.6849062745611	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4269	False	NA	-34	True	AATAAA	-21	NA	104718352	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104718006
ES.8336.32	chr12	-	6103	27	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-123	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	71.9446800135251	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4287	False	NA	-34	True	AATAAA	-21	NA	104718334	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.33	chr12	-	6194	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	21	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	58.6495719575968	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4431	False	NA	-34	True	AATAAA	-21	NA	104718190	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.34	chr12	-	4774	23	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	1755	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.5344420823178	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	NA	False	NA	-34	True	AATAAA	-21	NA	104694668	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104662573_104663049_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591
ES.8336.35	chr12	-	6353	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-108	7	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_22	56.5815624942058	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4302	False	NA	-34	True	AATAAA	-21	NA	104718319	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694677_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.36	chr12	-	6507	28	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-12	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	73.6616853985001	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4440	False	NA	-34	True	AATAAA	-21	NA	104718181	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104717684
ES.8336.38	chr12	-	6452	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-140	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	58.2199383758674	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4270	False	NA	-34	True	AATAAA	-21	NA	104718351	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670986_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.39	chr12	-	6453	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-104	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	82.1144360770072	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4306	False	NA	-34	True	AATAAA	-21	NA	104718315	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104715951_104716078_104718006
ES.8336.40	chr12	-	4847	24	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-135	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.3319250357906	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4275	False	NA	-34	True	AATAAA	-21	NA	104718346	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104657928_104668644_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.41	chr12	-	6418	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-124	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	82.119655108275	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGAACTAATTTTGG	4286	False	NA	-34	True	AATAAA	-21	NA	104718335	104657694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104688790_104688862_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.42	chr12	-	7967	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-117	5	intron_retention	FALSE	canonical	0	0	junction_18	82.5959972724593	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTTGGAACTAATTTT	4293	False	NA	-36	True	AATAAA	-19	NA	104718328	104657696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104686875_104686978_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.43	chr12	-	6196	28	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-114	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	59.2363150026161	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTGGAACTAATTT	4296	False	NA	-37	True	AATAAA	-18	NA	104718325	104657697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104676940_104679257_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.44	chr12	-	7323	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-135	4	intron_retention	FALSE	canonical	3	188	junction_19	36.2665032676058	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTGGAACTAATTT	4275	False	NA	-37	True	AATAAA	-18	NA	104718346	104657697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.45	chr12	-	6387	30	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-133	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	57.4235779173707	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTGGAACTAATTT	4277	False	NA	-37	True	AATAAA	-18	NA	104718344	104657697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675070_104675133_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.46	chr12	-	6379	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-58	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	73.3295173326874	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTGGAACTAATTT	4352	False	NA	-37	True	AATAAA	-18	NA	104718269	104657697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695533_104696391_104696515_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.48	chr12	-	5811	27	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-135	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	59.4787018716058	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTTTGGAACTAATTT	4275	False	NA	-37	True	AATAAA	-18	NA	104718346	104657697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.5	chr12	-	10068	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-151	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	53.666423842203	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTCTTTAGCTTTGT	4259	False	NA	-8	True	AATAAA	-16	NA	104718362	104654000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
ES.8336.50	chr12	-	6591	31	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-140	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	82.2457631465327	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTCTTTGGAACTAATT	4270	False	NA	-38	True	AATAAA	-17	NA	104718351	104657698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104701769_104701834_104702630_104702701_104704027_104704126_104705041_104705108_104718006
ES.8336.53	chr12	-	6270	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-116	1	combination_of_known_splicesites	FALSE	canonical	3	8	junction_21	57.909986440099	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACTCTTTGGAACTAA	4294	False	NA	-40	True	AATAAA	-15	NA	104718327	104657700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.56	chr12	-	6328	27	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	72.7947690590942	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACTCTTTGGAACTA	4287	False	NA	-41	True	AATAAA	-14	NA	104718334	104657701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690385_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
ES.8336.58	chr12	-	1817	10	NIC	ENSMUSG00000041415.12	novel	1460	9	NA	NA	-131	10	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	17.1464281994822	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGAAAAGCCAGAG	4279	False	NA	NA	False	AAGAAA	-4	NA	104718342	104688332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.59	chr12	-	3783	8	NIC	ENSMUSG00000041415.12	novel	1460	9	NA	NA	137	-3434	combination_of_known_junctions	FALSE	canonical	3	201	junction_5	18.6076569712359	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTAGTGTGGGCTGTTCT	4589	False	NA	NA	False	ACTAAA	-18	NA	104718032	104691776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.6	chr12	-	10115	29	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-109	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	58.1795580026847	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTCTTTAGCTTTG	4301	False	NA	-9	True	AATAAA	-15	NA	104718320	104654001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679489_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.7	chr12	-	10062	27	NNC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-146	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	85.4860883522878	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTCTTTAGCTTTG	4264	False	NA	-9	True	AATAAA	-15	NA	104718357	104654001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690385_104694591_104694753_104695386_104695533_104696391_104696523_104697278_104697442_104698058_104698247_104718006
ES.8336.8	chr12	-	9656	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-151	-510	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAGACATTTTAAAGATA	4259	False	NA	NA	False	AATAAA	-20	NA	104718362	104654510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8336.9	chr12	-	9166	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-140	-989	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACTCCTATAATTATCG	4270	False	NA	NA	False	ATTAAA	-15	NA	104718351	104654989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ES.8337.1	chr12	+	532	1	Intergenic	novelGene_6886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTATTACTGTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	104718510	104719042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104718500_104719000
ES.8338.1	chr12	-	305	1	Intergenic	novelGene_6887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAACAATATGGAA	NA	False	NA	NA	False	NA	NA	NA	104726430	104726125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_104726100_104726400
ES.8339.1	chr12	+	227	1	Intergenic	novelGene_6888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	False	NA	NA	False	AATAAA	-6	NA	104727876	104728103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104727900_104728100
ES.834.1	chr1	+	170	1	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	78631820	78631990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78631800_78632000
ES.8340.1	chr12	-	4213	1	Genic_Genomic	ENSMUSG00000021097.16	novel	NA	NA	NA	NA	13543	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTTTGCTAACTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	104733587	104729374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_104729400_104733600
ES.8341.1	chr12	-	6322	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	-59	5603	-59	2760	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTC	NA	False	NA	NA	False	AATAAA	-23	NA	104831394	104734978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.10	chr12	-	3937	12	NIC	ENSMUSG00000021097.16	novel	3455	15	NA	NA	-59	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	19.8515149202296	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGGGCGGAGTCTTT	NA	False	NA	-27	True	AATAAA	-12	NA	104831394	104738018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104738223_104739440_104739534_104740031_104740809_104743203_104743401_104746980_104748661_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.11	chr12	-	3206	11	ISM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-110	2794	-43	2	5prime_fragment	FALSE	canonical	3	35	junction_4	8.43563868358526	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGCCTCTTTGTGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	104831378	104740532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.12	chr12	-	5518	9	ISM	ENSMUSG00000021097.16	ENSMUST00000223103.2	3362	14	-45	6182	-45	-3663	5prime_fragment	FALSE	canonical	3	35	junction_2	4.42824739597959	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAGTACAATA	NA	False	NA	NA	False	NA	NA	NA	104831380	104744197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.2	chr12	-	6405	14	FSM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-118	-2758	-51	2758	multi-exon	FALSE	non_canonical	0	0	junction_1	16.3518994427135	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	104831386	104734980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104738223_104739440_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.3	chr12	-	3618	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	-58	8306	-58	57	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCCTGGAGGAGCTTG	NA	False	NA	NA	False	NA	NA	NA	104831393	104737681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.4	chr12	-	3145	11	NIC	ENSMUSG00000021097.16	novel	11866	13	NA	NA	-32	19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	12.8953479984062	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCATCTTACTGTCTGTT	NA	False	NA	-5	True	AATAAA	-34	NA	104831367	104737996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_104738223_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.5	chr12	-	3417	14	FSM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-146	258	-79	19	multi-exon	FALSE	non_canonical	0	0	junction_1	16.3518994427135	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCATCTTACTGTCTGTT	NA	False	NA	-5	True	AATAAA	-34	NA	104831414	104737996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104738223_104739440_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.6	chr12	-	3303	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	-60	8623	-60	17	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGCATCTTACTGTCTG	NA	False	NA	-7	True	AATAAA	-32	NA	104831395	104737998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.7	chr12	-	3297	14	NNC	ENSMUSG00000021097.16	novel	3307	14	NA	NA	17	16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.0594310435889	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGCATCTTACTGTCT	NA	False	NA	-8	True	AATAAA	-31	NA	104831318	104737999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104738223_104740031_104740103_104740747_104740809_104742115_104742188_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8341.8	chr12	-	3372	13	NNC	ENSMUSG00000021097.16	novel	11866	13	NA	NA	-66	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	18.3915741577495	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCGGAGTCTTTCTACC	NA	False	NA	-22	True	AATAAA	-17	NA	104831401	104738013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104757926_104758098_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ES.8342.1	chr12	+	160	1	Intergenic	novelGene_6889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	104835836	104835996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104835800_104836000
ES.8343.1	chr12	+	124	1	Intergenic	novelGene_6890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	104923234	104923358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_104923200_104923400
ES.8344.1	chr12	-	3190	18	NNC	ENSMUSG00000054150.13	novel	3357	19	NA	NA	-234	58	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	1.12536038057112	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTTATATGCCATGT	NA	False	NA	NA	False	ACTAAA	-33	NA	104976302	104898228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104898631_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929592_104934140_104934451_104935459_104935633_104941996_104942155_104976249
ES.8344.2	chr12	-	4919	17	NNC	ENSMUSG00000054150.13	novel	3357	19	NA	NA	-234	45	intron_retention	FALSE	canonical	0	0	junction_2	1.08793094909558	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATATGTACAGAATTT	NA	False	NA	NA	False	ACTAAA	-20	NA	104976302	104898241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104898631_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920513_104921785_104921969_104924212_104924388_104925655_104927933_104929429_104929592_104934140_104934451_104935459_104935633_104941996_104942155_104976249
ES.8344.3	chr12	-	5002	3	NNC	ENSMUSG00000054150.13	novel	5263	18	NA	NA	-251	-39072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104976319	104937358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_104942155_104963729_104963866_104976249
ES.8345.1	chr12	-	535	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	-12	4	-10	-4	multi-exon	FALSE	canonical	3	45	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCTGTGTGTCTCGTCT	8326	False	NA	NA	False	NA	NA	NA	104998548	104996879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104997085_104998218
ES.8345.2	chr12	-	375	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222672.2	381	2	-7	13	-7	-13	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAACCAATAAAT	8329	False	NA	NA	False	NA	NA	NA	104998545	104996921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_104997085_104998333
ES.8346.1	chr12	+	926	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-50	2049	-48	118	multi-exon	FALSE	canonical	3	651	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTGAGTCATTAAAT	6310	False	NA	15	True	ATTAAA	-15	NA	104998898	105007116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_104999242_105006533
ES.8347.1	chr12	+	180	1	Intergenic	novelGene_6891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGAGATTGCTCAG	5457	False	NA	NA	False	NA	NA	NA	105025585	105025765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105025600_105025800
ES.8348.1	chr12	+	2522	2	Intergenic	novelGene_6892	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTAATTCTGCTACTG	NA	False	NA	NA	False	NA	NA	NA	105043741	105083555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105043885_105081176
ES.8348.2	chr12	+	2225	4	Genic_Genomic	ENSMUSG00000113051.2	novel	246	1	NA	NA	-57711	2035	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCTGTGCTGAGCAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	105043743	105103735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_105043885_105086679_105086836_105101529_105101701_105101978
ES.8348.3	chr12	+	2755	2	Intergenic	novelGene_6893	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGTCCCCCCAAAGT	NA	False	NA	NA	False	NA	NA	NA	105043744	105063081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105043885_105060466
ES.8348.4	chr12	+	1835	3	Intergenic	novelGene_6894	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTTATGGTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	105043801	105082793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105043885_105079449_105079585_105081176
ES.8348.5	chr12	+	176	1	Intergenic	novelGene_6896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTATTTGTATGTA	NA	False	NA	NA	False	NA	NA	NA	105046348	105046524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105046300_105046500
ES.8348.6	chr12	+	4607	1	Intergenic	novelGene_6897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	105075545	105080152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105075500_105080200
ES.8348.7	chr12	+	1668	2	Intergenic	novelGene_6898	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCCTTGGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	105076253	105082787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105076311_105081176
ES.8348.8	chr12	+	2673	2	Intergenic	novelGene_6899	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCCTTGGTTATGGT	NA	False	NA	NA	False	NA	NA	NA	105076278	105082787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105077341_105081176
ES.8348.9	chr12	+	1899	2	Genic_Genomic	ENSMUSG00000113051.2	novel	246	1	NA	NA	-499	2035	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCTGTGCTGAGCAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	105100955	105103735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_105101701_105102581
ES.8349.1	chr12	-	179	1	Intergenic	novelGene_6895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGACACAAGTA	NA	False	NA	NA	False	NA	NA	NA	105046057	105045878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105045900_105046100
ES.835.1	chr1	+	3039	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-40	-23	18	23	multi-exon	TRUE	canonical	3	358	junction_1	36.8929090028677	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGACACTGTTGGGTT	NA	False	NA	26	True	AATAAA	-37	NA	78635559	78684707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.10	chr1	+	2463	14	FSM	ENSMUSG00000032883.16	ENSMUST00000134566.8	2492	14	-19	48	-19	-48	multi-exon	FALSE	canonical	1	7	junction_1	120.022335199518	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTATGTACATTTTAA	NA	False	NA	-47	True	AATAAA	-13	NA	78635580	78684570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.11	chr1	+	2857	14	NIC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	-19	13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	122.592797842452	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAATATATGCCTGACA	NA	False	NA	16	True	AATAAA	-27	NA	78635580	78684697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.12	chr1	+	2752	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	40	1158	-18	-316	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTCTGTCTGTTCCTT	NA	False	NA	12	True	AGTAAA	-17	NA	78635581	78684302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.13	chr1	+	6662	16	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	-16	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	182.381236851699	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCGAATATATGC	NA	False	NA	10	True	AATAAA	-21	NA	78635583	78684691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78640998_78642042_78645717_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.14	chr1	+	4972	14	NIC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	-14	7	intron_retention	FALSE	canonical	3	358	junction_1	38.2378108358048	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCGAATATATGC	NA	False	NA	10	True	AATAAA	-21	NA	78635585	78684691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.15	chr1	+	1969	5	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-8	13852	-8	766	5prime_fragment	FALSE	canonical	3	358	junction_1	44.0645832840843	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAGAAAAGAATGTAT	NA	False	NA	NA	False	NA	NA	NA	78635591	78670832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798
ES.835.17	chr1	+	3249	17	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.912422833301	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCGAATATATGC	NA	False	NA	10	True	AATAAA	-21	NA	78635597	78684691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78640998_78646126_78646251_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.18	chr1	+	2862	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	114	0	-48	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTATGTACATTTTAA	NA	False	NA	-47	True	AATAAA	-13	NA	78635599	78684570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.19	chr1	+	3842	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	0	0	0	intron_retention	FALSE	canonical	3	358	junction_1	37.4497691194564	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAGAAATTTCGAA	NA	False	NA	3	True	AATAAA	-14	NA	78635599	78684684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950
ES.835.2	chr1	+	3676	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-193	3910	-193	18	multi-exon	FALSE	canonical	2	10	junction_2	87	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTTAAGAGAGCTGT	NA	False	NA	17	True	NA	NA	NA	78635561	78645319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78640857_78640998_78642042
ES.835.20	chr1	+	2959	15	NNC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	118.427709802139	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCGAATATATGC	NA	False	NA	10	True	AATAAA	-21	NA	78635599	78684691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676736_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.21	chr1	+	3981	15	ISM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	58	777	0	-1	intron_retention	FALSE	canonical	3	149	junction_2	100.473674082684	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTTAAGAAATTTCGA	NA	False	NA	2	True	AATAAA	-13	NA	78635599	78684683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950
ES.835.22	chr1	+	5434	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	-2458	0	1682	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTGTCAGAATTGTGT	NA	False	NA	NA	False	NA	NA	NA	78635599	78687142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.23	chr1	+	2810	15	NNC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	2	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	116.771121849365	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCGAATATATGC	NA	False	NA	10	True	AATAAA	-21	NA	78635601	78684691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635650_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.24	chr1	+	2995	16	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	139.458795188957	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCGAATATATGCCTG	NA	False	NA	13	True	AATAAA	-24	NA	78635601	78684694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78684103
ES.835.25	chr1	+	3689	13	NIC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_5	126.364442080129	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAGAAATTTCGAA	NA	False	NA	3	True	AATAAA	-14	NA	78635601	78684684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950
ES.835.26	chr1	+	2835	15	NNC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	117.509986549125	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTTAAGAAATTTCG	NA	False	NA	1	True	AATAAA	-12	NA	78635601	78684682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78682999_78684001
ES.835.27	chr1	+	3065	16	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	2	13	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	152.507865006658	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAATATATGCCTGACA	NA	False	NA	16	True	AATAAA	-27	NA	78635601	78684697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78672778_78672857_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.29	chr1	+	3125	16	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127.062014605292	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTTAAGAAATTTCGA	NA	False	NA	2	True	AATAAA	-13	NA	78635601	78684683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78641010_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.3	chr1	+	3195	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	22	733	22	43	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATACTTGCTTTTTCTGT	NA	False	NA	46	True	AATATA	-20	NA	78635563	78684727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.31	chr1	+	3196	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-153	4350	-153	-422	multi-exon	FALSE	canonical	2	10	junction_2	87	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	78635601	78644879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78640857_78640998_78642042
ES.835.33	chr1	+	4613	14	NIC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	2	6	intron_retention	FALSE	canonical	3	358	junction_1	35.961188809489	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATTTCGAATATATG	NA	False	NA	9	True	AATAAA	-20	NA	78635601	78684690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78683109_78683974
ES.835.34	chr1	+	2920	15	NIC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	2	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	141.105059282444	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTTAAGAAATTTCG	NA	False	NA	1	True	AATAAA	-12	NA	78635601	78684682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78681202_78681318_78682950_78683109_78683974
ES.835.35	chr1	+	6808	17	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	2	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	154.437272359201	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCCTGACACTGTTGG	NA	False	NA	23	True	AATAAA	-34	NA	78635601	78684704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78640998_78642042_78645717_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.36	chr1	+	2724	14	NIC	ENSMUSG00000032883.16	novel	2976	15	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	122.112471194804	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGATTTGTTGCTGT	NA	False	NA	-2	True	TTTAAA	-25	NA	78635604	78684615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_78635821_78659309_78659728_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.37	chr1	+	3188	17	NNC	ENSMUSG00000032883.16	novel	3950	16	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	164.04648731381	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTTAAGAAATTTCGA	NA	False	NA	2	True	AATAAA	-13	NA	78635604	78684683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78672778_78672857_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.4	chr1	+	3782	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-31	-775	27	-1	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTTCAGAGTCTTG	NA	False	NA	6	True	AATAAA	-18	NA	78635568	78685459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.40	chr1	+	640	1	ISM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	12828	7	12426	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAAGTGGTGCTTCATT	NA	False	NA	5	True	AATAAA	-15	NA	78648582	78649222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78648600_78649200
ES.835.41	chr1	+	3814	2	NNC	ENSMUSG00000032883.16	novel	627	4	NA	NA	-2214	-4189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAACTTTCCTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	78657442	78661810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78657964_78658517
ES.835.42	chr1	+	3402	14	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	23061	2	-996	-2	3prime_fragment	FALSE	canonical	3	378	junction_1	30.9379986959986	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTTTAAGAAATTTCG	264	False	NA	1	True	AATAAA	-12	NA	78658660	78684682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.43	chr1	+	173	1	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAACAAACAAAGAAAAT	2456	False	NA	NA	False	NA	NA	NA	78660852	78661025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_78660900_78661000
ES.835.44	chr1	+	2195	13	NNC	ENSMUSG00000032883.16	novel	742	6	NA	NA	-1669	18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.746767436316	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATGCCTGACACTGTT	7914	False	NA	21	True	AATAAA	-32	NA	78666310	78684702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78666329_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.45	chr1	+	3717	2	NNC	ENSMUSG00000032883.16	novel	627	4	NA	NA	-976	778	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATTATGTGGTTCAT	8607	False	NA	NA	False	NA	NA	NA	78667003	78670844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_78668277_78668400
ES.835.5	chr1	+	2751	2	ISM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-29	22874	-29	-4189	5prime_fragment	FALSE	canonical	3	358	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAACTTTCCTCCTTAC	NA	False	NA	NA	False	NA	NA	NA	78635570	78661810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_78635821_78659309
ES.835.6	chr1	+	3531	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-28	-527	-28	-249	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAAGCTGTGGTGAACC	NA	False	NA	NA	False	ATTAAA	-36	NA	78635571	78685211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.7	chr1	+	2611	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	-20	385	-20	-319	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGTGTCTGTCTGTTC	NA	False	NA	9	True	AGTAAA	-14	NA	78635579	78684299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.835.8	chr1	+	3907	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	39	4	-19	-4	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGCCTCTTCAGAGTC	NA	False	NA	3	True	AATAAA	-15	NA	78635580	78685456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ES.8350.1	chr12	+	3903	4	FSM	ENSMUSG00000060863.13	ENSMUST00000081379.7	1009	4	-2897	3	-1878	-1	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATTGTGTGCTGAGCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	105110394	105121481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105113493_105119257_105119429_105120321_105120363_105120888
ES.8351.1	chr12	-	325	1	Intergenic	novelGene_6900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAGGGTAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	105155120	105154795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105154800_105155100
ES.8352.1	chr12	-	5078	3	ISM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	20	3	-1	-3	intron_retention	FALSE	canonical	0	0	junction_2	674.5	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188976	105183011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_105183961_105184481_105184552_105184917
ES.8352.11	chr12	-	1379	3	NIC	ENSMUSG00000041359.15	novel	1299	3	NA	NA	23	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	54	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189029	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105183961_105184917_105185089_105188766
ES.8352.12	chr12	-	3491	2	NNC	ENSMUSG00000041359.15	novel	658	2	NA	NA	2334	1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105186550	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364
ES.8352.13	chr12	-	1530	6	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	538.906819403874	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188975	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105184917_105185089_105185835_105186040_105188791
ES.8352.14	chr12	-	1847	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	0	1	intron_retention	FALSE	non_canonical	0	0	junction_1	917.824601980139	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188975	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105184552_105184917_105185089_105188791
ES.8352.16	chr12	-	2288	2	NIC	ENSMUSG00000041359.15	novel	1299	3	NA	NA	-10	1	intron_retention	FALSE	canonical	3	1947	junction_1	0	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189006	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105185089_105188791
ES.8352.17	chr12	-	1269	4	NNC	ENSMUSG00000041359.15	novel	760	4	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	893.888260479028	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189037	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184966_105185089_105188791
ES.8352.2	chr12	-	5986	1	Genic_Genomic	ENSMUSG00000041359.15	novel	NA	NA	NA	NA	-1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	534	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTGCTCTTGGAATT	NA	False	NA	-5	True	AATAAA	-20	NA	105188997	105183011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_105183000_105189000
ES.8352.20	chr12	-	1208	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	553.795590047046	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189028	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105188791
ES.8352.22	chr12	-	1210	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	66	-741	10	1	multi-exon	FALSE	canonical	3	551	junction_2	399	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188986	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_105183961_105184481_105184552_105188791
ES.8352.24	chr12	-	1417	4	NIC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	612.059002239345	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188997	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105183961_105184481_105184552_105184917_105185089_105188766
ES.8352.25	chr12	-	1394	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	570.252740019721	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189018	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105184917_105185089_105188766
ES.8352.27	chr12	-	1280	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	50.9116882454314	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188974	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184917_105185089_105188766
ES.8352.28	chr12	-	1148	2	NIC	ENSMUSG00000041359.15	novel	1299	3	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	51	junction_1	0	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTTCTCGTGCTCTTG	NA	False	NA	-10	True	AATAAA	-15	NA	105188995	105183016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105183961_105188791
ES.8352.29	chr12	-	1346	4	NIC	ENSMUSG00000041359.15	novel	760	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	586.907715630547	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTTCTCGTGCTCTTG	NA	False	NA	-10	True	AATAAA	-15	NA	105188976	105183016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105183961_105184481_105184552_105184966_105185089_105188766
ES.8352.3	chr12	-	1435	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	-41	4	15	-4	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCGTGCTCTTGGAAT	NA	False	NA	-6	True	AATAAA	-19	NA	105189037	105183012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
ES.8352.30	chr12	-	1733	3	NIC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	1	-1	intron_retention	FALSE	canonical	3	1349	junction_1	299	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATTTCTCGTGCTCTT	NA	False	NA	-11	True	AATAAA	-14	NA	105188974	105183017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105183961_105184481_105185089_105188791
ES.8352.31	chr12	-	1075	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-1	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	917.824601980139	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGGCCAAATCGGCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	105188997	105183218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184917_105185089_105188791
ES.8352.4	chr12	-	1382	5	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	21	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	850.691777320082	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189031	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105184917_105185089_105188791
ES.8352.5	chr12	-	1331	5	NNC	ENSMUSG00000041359.15	novel	760	4	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	827.255401916482	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189029	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184481_105184552_105184966_105185089_105188791
ES.8352.6	chr12	-	1343	4	FSM	ENSMUSG00000041359.15	ENSMUST00000176579.2	760	4	-32	-551	-1	1	multi-exon	FALSE	canonical	3	100	junction_2	769.488574747323	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188997	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_105183961_105184481_105184552_105184966_105185089_105188791
ES.8352.7	chr12	-	1372	3	FSM	ENSMUSG00000041359.15	ENSMUST00000101071.4	1299	3	-72	-1	5	1	multi-exon	FALSE	canonical	0	0	junction_1	973.5	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189047	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_105183961_105184917_105185089_105188791
ES.8352.8	chr12	-	1455	6	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	778.8	534	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105188976	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184207_105184336_105184481_105184552_105184917_105185089_105188791
ES.8352.9	chr12	-	1664	4	NNC	ENSMUSG00000041359.15	novel	1398	4	NA	NA	-331	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	917.824601980139	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTTCTCGTGCTCTTGG	NA	False	NA	-9	True	AATAAA	-16	NA	105189383	105183015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105183321_105183364_105183961_105184917_105185089_105188791
ES.8353.1	chr12	-	2501	1	Intergenic	novelGene_6901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACTTCATATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	105252406	105249905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105249900_105252400
ES.8354.1	chr12	-	7650	1	Antisense	novelGene_ENSMUSG00000097929.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105302381	105294731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_105294700_105302400
ES.8355.1	chr12	+	3577	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-260	1	intron_retention	FALSE	canonical	3	11	junction_1	10.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTTATCTAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	105302592	105350190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105303253_105303488_105303819_105347603
ES.8355.2	chr12	+	3520	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	-241	3	-241	-1	multi-exon	FALSE	canonical	3	14	junction_1	9	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATTTTATCTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	105302611	105350188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105303217_105303488_105303819_105347603
ES.8355.3	chr12	+	1382	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	102	1798	102	-1796	multi-exon	FALSE	canonical	3	14	junction_1	9	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATAGCTCTTCTTGGTT	NA	False	NA	56	True	NA	NA	NA	105302954	105348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105303217_105303488_105303819_105347603
ES.8355.4	chr12	+	1181	3	NNC	ENSMUSG00000097929.10	novel	3282	3	NA	NA	-88	-1824	intron_retention	FALSE	canonical	3	11	junction_1	10.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATATTTGGAGAAGC	NA	False	NA	28	True	AATAAA	-22	NA	105303163	105348365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105303253_105303488_105303819_105347603
ES.8355.5	chr12	+	1184	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	149	1820	149	-1820	intron_retention	FALSE	canonical	3	32	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTGGAGAAGCACTT	NA	False	NA	32	True	AATAAA	-26	NA	105303400	105348369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105303819_105347603
ES.8355.6	chr12	+	2981	2	ISM	ENSMUSG00000097929.10	ENSMUST00000180503.3	2876	4	173	-1	173	1	intron_retention	FALSE	canonical	3	32	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATTTTATCTAATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	105303424	105350190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105303819_105347603
ES.8356.1	chr12	+	178	1	Intergenic	novelGene_6902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTGAAATGCT	NA	False	NA	NA	False	NA	NA	NA	105394376	105394554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105394400_105394600
ES.8357.1	chr12	+	1838	1	ISM	ENSMUSG00000094910.2	ENSMUST00000178224.2	5786	2	37395	7	37395	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTGTCTGGCTCCCA	3468	False	NA	1	True	ATTAAA	-15	NA	105457509	105459347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105457500_105459300
ES.8358.1	chr12	-	1155	1	Intergenic	novelGene_6903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	105507554	105506399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105506400_105507600
ES.8359.1	chr12	+	3888	3	FSM	ENSMUSG00000021070.7	ENSMUST00000001652.7	3792	3	-89	-7	-89	7	multi-exon	FALSE	canonical	3	6	junction_1	4.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGTGTCAAACTTCC	NA	False	NA	NA	False	AATAAA	-21	NA	105529395	105561503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105529508_105554455_105554560_105557831
ES.8359.2	chr12	+	4210	4	NNC	ENSMUSG00000021070.7	novel	3792	3	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.84754619472471	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTTTCCCTGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	105529445	105561496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105529508_105551401_105551781_105554455_105554560_105557831
ES.8359.3	chr12	+	190	1	Intergenic	novelGene_6904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACTT	NA	False	NA	NA	False	NA	NA	NA	105542884	105543074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105542900_105543100
ES.8359.4	chr12	+	3903	3	NNC	ENSMUSG00000021070.7	novel	3792	3	NA	NA	19478	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATAGTGTTTCCCTGTGT	NA	False	NA	NA	False	AATAAA	-12	NA	105548962	105561494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105549099_105554455_105554560_105557831
ES.8359.5	chr12	+	4107	4	NNC	ENSMUSG00000021070.7	novel	3792	3	NA	NA	19489	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.07106781186548	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGTGTTTCCCTGTGTC	NA	False	NA	NA	False	AATAAA	-13	NA	105548973	105561495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105549099_105551401_105551616_105554455_105554560_105557831
ES.8359.6	chr12	+	3860	3	NNC	ENSMUSG00000021070.7	novel	3792	3	NA	NA	19531	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTTTCCCTGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	105549015	105561496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105549107_105554455_105554560_105557831
ES.836.1	chr1	-	3643	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAAAGGGATATGATATA	4970	False	NA	NA	False	NA	NA	NA	78653329	78649686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_78649700_78653300
ES.836.2	chr1	-	10092	1	Antisense	novelGene_ENSMUSG00000032883.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-36	NA	78662013	78651921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_78651900_78662000
ES.8360.1	chr12	+	178	1	Intergenic	novelGene_6905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTAGTAGTCTG	NA	False	NA	NA	False	NA	NA	NA	105635895	105636073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105635900_105636100
ES.8361.1	chr12	-	10103	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	38	2602	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	14.3851169039488	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCTGTTGCTAGAGC	NA	False	NA	NA	False	ATTAAA	-33	NA	105651421	105579792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610050_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.11	chr12	-	7353	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	176	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.3084072331297	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651283	105582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590235_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.13	chr12	-	7498	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	14.1748241435405	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651482	105582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605601_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.15	chr12	-	7684	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_30	17.6497754846327	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTATACGTCCA	NA	False	NA	0	True	AATAAA	-19	NA	105651578	105582396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624650_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630903_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.2	chr12	-	8280	8	ISM	ENSMUSG00000041341.11	ENSMUST00000221015.2	3687	21	16372	-2597	-828	2597	3prime_fragment	FALSE	canonical	3	73	junction_4	5.473498303048	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTATTGTCTGTTGCT	NA	False	NA	NA	False	ATTAAA	-28	NA	105596716	105579797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986
ES.8361.20	chr12	-	7541	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	14.1955410213893	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTTGTATACGTCCA	NA	False	NA	0	True	AATAAA	-19	NA	105651537	105582396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615348_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.22	chr12	-	7687	43	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	16.3626870759259	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTATACGTCC	NA	False	NA	-1	True	AATAAA	-18	NA	105651515	105582397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105586736_105586833_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.24	chr12	-	3259	1	NIC	ENSMUSG00000041341.11	novel	3687	21	NA	NA	3745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTATACGTCC	NA	False	NA	-1	True	AATAAA	-18	NA	105585656	105582397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105582400_105585700
ES.8361.27	chr12	-	5641	33	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-15888	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.417338808546	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTGTTGTATACGTC	NA	False	NA	-2	True	AATAAA	-17	NA	105628976	105582398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105601978_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873
ES.8361.28	chr12	-	7380	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	101	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.3851169039488	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGATTGTTGTATACG	NA	False	NA	-4	True	AATAAA	-15	NA	105651358	105582400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589037_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.29	chr12	-	6979	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-86	-653	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTCATTGGGAATGAG	NA	False	NA	2	True	ATTAAA	-28	NA	105651556	105583050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.31	chr12	-	7013	43	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-38	-667	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	16.3626870759259	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTTACTGACAAGAGC	NA	False	NA	-12	True	ATTAAA	-14	NA	105651508	105583064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105586736_105586833_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.32	chr12	-	6875	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-6	-667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	14.4078437226969	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTTACTGACAAGAGC	NA	False	NA	-12	True	ATTAAA	-14	NA	105651476	105583064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624405_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.33	chr12	-	6752	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-6	-791	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.3084072331297	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACACAGCCAAAAACTTG	NA	False	NA	NA	False	AGTAAA	-19	NA	105651476	105583188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590235_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.34	chr12	-	6739	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-1	-792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	14.415026200768	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACACACAGCCAAAAACTT	NA	False	NA	NA	False	AGTAAA	-18	NA	105651460	105583189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602134_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.36	chr12	-	6736	42	NNC	ENSMUSG00000041341.11	novel	3833	11	NA	NA	2	-1605	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.5231616859468	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTAATTGAATATTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	105651457	105584002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105584374_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.37	chr12	-	5738	34	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-62	-18622	combination_of_known_junctions	FALSE	canonical	3	50	junction_32	7.4933701949036	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTACTGAGGATT	NA	False	NA	NA	False	NA	NA	NA	105651532	105601019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.38	chr12	-	4893	30	NNC	ENSMUSG00000041341.11	novel	3833	11	NA	NA	-9	19622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7742111996877	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTGTGCTGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	105651479	105605900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105606104_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.39	chr12	-	2880	11	FSM	ENSMUSG00000041341.11	ENSMUST00000221568.2	3833	11	-57	1010	-46	-1010	multi-exon	FALSE	canonical	3	50	junction_9	7.93725393319377	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCATGATGCAATGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	105651516	105626532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.4	chr12	-	11198	7	NIC	ENSMUSG00000041341.11	novel	3687	21	NA	NA	154	2594	intron_retention	FALSE	canonical	3	73	junction_3	5.87130498460285	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGTATTGTCTGTT	NA	False	NA	NA	False	ATTAAA	-25	NA	105595734	105579800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986
ES.8361.40	chr12	-	180	1	Intergenic	novelGene_6906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTTTTTATCTCA	7221	False	NA	NA	False	NA	NA	NA	105639517	105639337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105639300_105639500
ES.8361.41	chr12	-	203	1	Intergenic	novelGene_6907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAAATAAACTTAGAATT	1035	False	NA	NA	False	NA	NA	NA	105645703	105645500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105645500_105645700
ES.8361.5	chr12	-	8080	43	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-6	423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	18.8079113232882	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTGTAGACATTTG	NA	False	NA	NA	False	NA	NA	NA	105651476	105581971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105586736_105586833_105587465_105587622_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8361.6	chr12	-	3292	13	ISM	ENSMUSG00000041341.11	ENSMUST00000221015.2	3687	21	7424	-423	7424	423	3prime_fragment	FALSE	canonical	3	63	junction_11	8.19001763666531	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTTGTAGACATTTG	8996	False	NA	NA	False	NA	NA	NA	105605664	105581971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460
ES.8361.7	chr12	-	8757	40	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	4	0	intron_retention	FALSE	canonical	2	2	junction_38	16.7365399223766	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651455	105582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641113_105641273_105650927
ES.8361.8	chr12	-	5062	8	NNC	ENSMUSG00000041341.11	novel	3687	21	NA	NA	-3203	0	intron_retention	TRUE	canonical	0	0	junction_7	28.7196157100093	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105599091	105582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105594289_105597629
ES.8361.9	chr12	-	7656	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	-107	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651577	105582394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ES.8362.1	chr12	+	1684	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-42	1078	-42	-1078	multi-exon	FALSE	canonical	3	113	junction_2	9.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAAAGGACCTGGCTC	NA	False	NA	33	True	AATAAA	-37	NA	105651600	105668204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105651718_105664976_105665236_105666896
ES.8362.2	chr12	+	2397	4	NNC	ENSMUSG00000044715.8	novel	2720	3	NA	NA	-32	14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	58.2656750487703	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCATGCTTAAAAACTGAA	NA	False	NA	NA	False	AATAAA	-34	NA	105651610	105669296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105651718_105664976_105665236_105666896_105668682_105669050
ES.8362.3	chr12	+	518	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	548	-2	-7	2	multi-exon	FALSE	canonical	3	132	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAGGGTGTAAATACA	NA	False	NA	NA	False	AATAAA	-17	NA	105651635	105665412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105651718_105664976
ES.8362.4	chr12	+	1421	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	-7	1306	-7	-1306	multi-exon	FALSE	canonical	3	113	junction_2	9.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCGCCCTTCTTCC	NA	False	NA	NA	False	TATAAA	-16	NA	105651635	105667976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105651718_105664976_105665236_105666896
ES.8362.5	chr12	+	3976	3	NNC	ENSMUSG00000044715.8	novel	2720	3	NA	NA	16	-3	intron_retention	FALSE	canonical	0	0	junction_2	66	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTGAGCATAAAGCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	105651675	105669279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105651718_105664976_105668682_105669050
ES.8362.6	chr12	+	2670	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	41	9	24	-9	multi-exon	FALSE	canonical	3	113	junction_2	9.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTGAGTTGAGCATAA	NA	False	NA	NA	False	AATAAA	-11	NA	105651683	105669273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105651718_105664976_105665236_105666896
ES.8363.1	chr12	-	3703	1	Antisense	novelGene_ENSMUSG00000041323.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	7605	False	NA	NA	False	NA	NA	NA	105677667	105673964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_105674000_105677700
ES.8364.1	chr12	+	154	1	Intergenic	novelGene_6908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAATAAAAAAAATCTT	6387	False	NA	NA	False	NA	NA	NA	105691794	105691948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105691800_105691900
ES.8365.1	chr12	-	159	1	Intergenic	novelGene_6909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	105703749	105703590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105703600_105703700
ES.8366.1	chr12	-	135	1	Intergenic	novelGene_6910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	105709615	105709480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105709500_105709600
ES.8367.1	chr12	+	1750	7	NNC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	1826	-16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	19.414341777837	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATCCTGAAGAAGAAAT	7227	False	NA	NA	False	AATAAA	-24	NA	105713359	105748690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105713575_105727726_105727856_105730213_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.10	chr12	+	157	1	Intergenic	novelGene_6912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	105731377	105731534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105731400_105731500
ES.8367.2	chr12	+	1663	6	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	1850	-12	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	18.3586491877807	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTGAAGAAGAAATTGGT	7251	False	NA	NA	False	AATAAA	-28	NA	105713383	105748694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105713575_105727726_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.3	chr12	+	1459	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	1921	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.0312256240101	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATCCTGAAGAAGAAAT	7322	False	NA	NA	False	AATAAA	-24	NA	105713454	105748690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105713575_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.4	chr12	+	1571	5	NIC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16100	-6	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	14.2653426176871	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAAATTGGTTTCTTT	NA	False	NA	NA	False	AATAAA	-34	NA	105727633	105748700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.5	chr12	+	1644	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55402	-1	16103	1	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTTTCTTTTATTGGT	NA	False	NA	NA	False	AATAAA	-41	NA	105727636	105748707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.6	chr12	+	2170	5	NNC	ENSMUSG00000041323.7	novel	3099	18	NA	NA	16116	-16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	21.2058364607483	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATCCTGAAGAAGAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	105727649	105748690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105727856_105732812_105733011_105734788_105735010_105747108_105747444_105747480
ES.8367.7	chr12	+	923	6	ISM	ENSMUSG00000041323.7	ENSMUST00000040876.7	3099	18	55459	663	16160	-663	3prime_fragment	FALSE	canonical	3	37	junction_2	5.54977477020464	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGCTTCCCTAGGG	NA	False	NA	NA	False	NA	NA	NA	105727693	105748043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105727856_105730211_105730281_105732812_105733011_105734788_105735010_105747108_105747268_105747929
ES.8367.8	chr12	+	283	1	Intergenic	novelGene_6911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCAGTATGGCACTGAT	NA	False	NA	NA	False	NA	NA	NA	105731373	105731656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105731400_105731700
ES.8368.1	chr12	+	4672	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	-148	-144	-148	7	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTGGTTTCTTTTGAC	NA	False	NA	19	True	AATAAA	-25	NA	105750804	105805210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.100	chr12	+	4427	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_12	523.653785912028	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750985	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.101	chr12	+	6113	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	-6	0	intron_retention	FALSE	canonical	1	1	junction_13	595.952250361339	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750985	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105781773_105781804_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.102	chr12	+	3074	11	NIC	ENSMUSG00000021111.16	novel	2076	12	NA	NA	-6	-172	intron_retention	FALSE	canonical	3	944	junction_9	310.773937131156	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATGGACTCGAGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	105750985	105780156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105778654_105779456
ES.8368.103	chr12	+	3241	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-4	-593	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	560.677928939601	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCCTAAAAGTTGAGTT	NA	False	NA	28	True	AATAAA	-22	NA	105750987	105802524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105801421
ES.8368.105	chr12	+	4368	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-3	2	intron_retention	FALSE	canonical	0	0	junction_4	433.923135474475	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105750988	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.106	chr12	+	4194	2	NNC	ENSMUSG00000021111.16	novel	529	4	NA	NA	-3	-15058	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAACATGCTCCCCCCC	NA	False	NA	NA	False	AAAAAG	-13	NA	105750988	105757790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105753384_105755991
ES.8368.108	chr12	+	4434	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2	-25	intron_retention	FALSE	non_canonical	0	0	junction_1	449.647107787819	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750989	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751163_105765914_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.109	chr12	+	3303	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2	666	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGTGGAAACGTCTC	NA	False	NA	-72	True	AATAAA	-16	NA	105750989	105802424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.11	chr12	+	4413	21	FSM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	-57	0	-8	0	multi-exon	FALSE	canonical	1	4	junction_6	426.918657357581	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750944	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.112	chr12	+	4429	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-25	intron_retention	FALSE	non_canonical	0	0	junction_7	436.762470666051	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750991	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774914_105775608_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.113	chr12	+	4020	20	NIC	ENSMUSG00000021111.16	novel	2436	21	NA	NA	0	-279	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	469.956478211273	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTCTGCAAGTCTAGT	NA	False	NA	NA	False	NA	NA	NA	105750991	105802838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.114	chr12	+	5419	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-24	-4362	0	2	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTCTCTGTGTTTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	105750991	105780330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.115	chr12	+	3298	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-620	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	573.277548400424	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTTGTGATACAAT	NA	False	NA	1	True	ATTAAA	-11	NA	105750991	105802497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.116	chr12	+	4525	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	0	intron_retention	TRUE	canonical	0	0	junction_10	513.927656741332	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778056_105778104_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.117	chr12	+	7780	18	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	2	intron_retention	FALSE	canonical	3	846	junction_8	359.129214054695	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105750991	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.118	chr12	+	3443	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	-581	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	556.365145942694	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTTAAATTATTGTTC	NA	False	NA	40	True	AATAAA	-34	NA	105750991	105802536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105781773_105781804_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.119	chr12	+	6395	20	ISM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-139	-1671	0	0	intron_retention	FALSE	canonical	3	84	junction_19	459.996164021101	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968
ES.8368.12	chr12	+	2806	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-70	-1703	-7	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105750945	105777671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.120	chr12	+	4410	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-1	intron_retention	FALSE	canonical	1	9	junction_2	451.991415847691	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCATAGTTGGCTGGTTT	NA	False	NA	11	True	AATAAA	-17	NA	105750991	105805202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.121	chr12	+	2732	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	665	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	569.00508707361	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGTGTGGAAACGTCT	NA	False	NA	-73	True	AATAAA	-15	NA	105750991	105802423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793206_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801982
ES.8368.123	chr12	+	6085	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-25	intron_retention	FALSE	canonical	2	3	junction_20	515.106197359169	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750991	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800933_105801044_105801421
ES.8368.124	chr12	+	3794	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-127	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	522.933865321419	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGGTGTGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	105750991	105802990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.126	chr12	+	4528	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	570.339883548784	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105774813_105774926_105775601_105775692_105775782_105775922_105777085_105777193_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.128	chr12	+	4485	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_11	459.988987347225	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCCATAGTTGGCTG	NA	False	NA	7	True	AATAAA	-13	NA	105750991	105805198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779444_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.130	chr12	+	3273	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-613	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	503.215105274942	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATACAATTTTTTTT	NA	False	NA	8	True	AATAAA	-2	NA	105750998	105802504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.132	chr12	+	1588	16	ISM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	37	11315	1	3199	5prime_fragment	FALSE	canonical	3	846	junction_12	390.099166879398	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTGAGTTGGATAT	NA	False	NA	NA	False	AATAAA	-5	NA	105750999	105789837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814
ES.8368.133	chr12	+	13443	19	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	1	2	intron_retention	FALSE	non_canonical	0	0	junction_10	481.431215681014	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105750999	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105782981_105783024_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.134	chr12	+	4464	22	NNC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_6	538.592837770759	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751006	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774811_105774926_105775601_105775685_105775782_105775922_105777295_105777375_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.136	chr12	+	4421	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2	-25	intron_retention	FALSE	non_canonical	0	0	junction_4	449.381742078357	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105751013	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771272_105772754_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.137	chr12	+	5391	21	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	-25	intron_retention	FALSE	canonical	2	3	junction_20	529.584976656249	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105751016	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801982
ES.8368.138	chr12	+	4447	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_12	455.811623181841	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751016	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779536_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.14	chr12	+	3809	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	-9	-1364	1	-601	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATTCCCTAAAA	NA	False	NA	20	True	AATAAA	-14	NA	105750953	105802516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.140	chr12	+	4032	19	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	2	-1	intron_retention	FALSE	canonical	2	4	junction_1	515.058336022409	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCATAGTTGGCTGGTTT	NA	False	NA	11	True	AATAAA	-17	NA	105751132	105805202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.141	chr12	+	4547	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	38	0	intron_retention	FALSE	canonical	2	5	junction_1	449.032853365275	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCCATAGTTGGCTG	NA	False	NA	7	True	AATAAA	-13	NA	105751168	105805198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751425_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.142	chr12	+	4437	21	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	81	-4	intron_retention	FALSE	canonical	2	5	junction_1	512.512875448022	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACAAATCCCATAGTTG	NA	False	NA	3	True	AATAAA	-9	NA	105751211	105805194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751425_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.143	chr12	+	4365	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	150	0	intron_retention	FALSE	non_canonical	0	0	junction_14	556.000220231934	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751280	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751425_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785092_105786604_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.144	chr12	+	4577	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	155	-25	intron_retention	FALSE	canonical	1	2	junction_1	449.401204022498	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105751285	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751597_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.145	chr12	+	5429	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	172	-25	intron_retention	FALSE	canonical	2	3	junction_21	510.483981816873	1379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105751302	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751425_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801982
ES.8368.146	chr12	+	4342	20	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	284	0	intron_retention	FALSE	canonical	1	2	junction_1	579.049589061937	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751414	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751597_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.147	chr12	+	4677	1	Intergenic	novelGene_6913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAACATGCTCCCCCCC	NA	False	NA	NA	False	AAAAAG	-13	NA	105753113	105757790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105753100_105757800
ES.8368.148	chr12	+	6511	9	NNC	ENSMUSG00000021111.16	novel	1170	9	NA	NA	2310	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	576.884087144029	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTAGTCTTATTTCT	NA	False	NA	13	True	AATAAA	-16	NA	105753440	105775964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105755058_105761886_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.149	chr12	+	4600	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	5235	2	intron_retention	FALSE	canonical	2	7	junction_1	448.787623565712	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105756365	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105756673_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.15	chr12	+	4037	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAGGGTCCATAAACAG	NA	False	NA	NA	False	AATAAA	-24	NA	105750954	105803123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.150	chr12	+	6203	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	5237	0	intron_retention	FALSE	canonical	2	7	junction_1	503.950911837602	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105756367	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105756673_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.151	chr12	+	3944	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	5237	-173	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	503.950911837602	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAGGCGGTGGGACACG	NA	False	NA	NA	False	AATAAA	-18	NA	105756367	105802944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105756673_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.152	chr12	+	4513	21	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	5257	0	intron_retention	FALSE	canonical	2	7	junction_1	512.292931339092	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCCATAGTTGGCTG	NA	False	NA	7	True	AATAAA	-13	NA	105756387	105805198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105756673_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.154	chr12	+	7234	9	NNC	ENSMUSG00000021111.16	novel	1170	9	NA	NA	6811	0	intron_retention	TRUE	canonical	0	0	junction_1	576.884087144029	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	NA	False	NA	NA	False	AATAAA	-14	NA	105757941	105777671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105758533_105761844_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.155	chr12	+	4051	9	NNC	ENSMUSG00000021111.16	novel	1170	9	NA	NA	-4750	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	739.565993928196	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTAGTCTTATTTCT	NA	False	NA	13	True	AATAAA	-16	NA	105761193	105775964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105761790_105763329_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774930_105775601_105775692_105775782
ES.8368.156	chr12	+	2209	21	ISM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	14956	1951	-35	-2	3prime_fragment	FALSE	canonical	3	846	junction_11	376.098803507802	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACCACCTCAGGGTCC	4456	False	NA	NA	False	AATAAA	-16	NA	105765908	105803115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.157	chr12	+	6404	19	ISM	ENSMUSG00000021111.16	ENSMUST00000021535.14	3022	23	15977	-304	996	299	intron_retention	FALSE	canonical	3	846	junction_10	377.928487095144	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTACATTTCCCGGT	5487	False	NA	NA	False	NA	NA	NA	105766939	105805502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.159	chr12	+	2872	18	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2130	-620	combination_of_known_junctions	FALSE	canonical	3	65	junction_17	442.830991685577	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTTGTGATACAAT	NA	False	NA	1	True	ATTAAA	-11	NA	105772742	105802497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.160	chr12	+	3977	18	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2130	2	intron_retention	FALSE	canonical	0	0	junction_6	453.857613755695	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105772742	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777373_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.161	chr12	+	2837	2	FSM	ENSMUSG00000021111.16	ENSMUST00000170831.2	295	2	-867	-1675	-157	-28	multi-exon	FALSE	canonical	3	1768	junction_1	0	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	105774715	105777643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105775692_105775782
ES.8368.162	chr12	+	3675	15	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	24592	30	11	-25	3prime_fragment	FALSE	canonical	3	846	junction_5	218.538606312431	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105775593	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.163	chr12	+	5501	12	NIC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	273	0	intron_retention	FALSE	canonical	3	846	junction_2	59.4831735357513	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105775855	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105775922_105777295_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.164	chr12	+	4531	13	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	333	-25	intron_retention	FALSE	canonical	0	0	junction_12	267.318162495555	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105775915	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023_105803309_105804759
ES.8368.165	chr12	+	11717	11	NNC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	457	2	intron_retention	FALSE	non_canonical	0	0	junction_1	289.896257305954	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105776039	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105782981_105783024_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.166	chr12	+	4294	1	Genic_Genomic	ENSMUSG00000021111.16	novel	NA	NA	NA	NA	1104	-1082	mono-exon	FALSE	NA	NA	NA	NA	NA	1123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTGTTTGTTTGTT	3262	False	NA	NA	False	GATAAA	-27	NA	105779713	105784007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_105779700_105784000
ES.8368.167	chr12	+	12215	8	NNC	ENSMUSG00000021111.16	novel	581	2	NA	NA	-1275	-25	intron_retention	FALSE	non_canonical	0	0	junction_1	343.556489131685	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	6412	False	NA	-18	True	NA	NA	NA	105782863	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105782981_105783024_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315
ES.8368.168	chr12	+	4221	8	NIC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	-279	-25	intron_retention	FALSE	canonical	3	84	junction_6	313.31154215729	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	7408	False	NA	-18	True	NA	NA	NA	105783859	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.169	chr12	+	3798	9	ISM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	32782	-1641	-226	-25	3prime_fragment	FALSE	canonical	3	84	junction_7	294.978812798479	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	7461	False	NA	-18	True	NA	NA	NA	105783912	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.17	chr12	+	4438	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	3	-25	intron_retention	FALSE	canonical	0	0	junction_10	460.536087107563	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750955	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778578_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.170	chr12	+	2986	8	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	35597	30	2460	-25	3prime_fragment	FALSE	canonical	3	889	junction_5	57.9006890798233	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	1879	False	NA	-18	True	NA	NA	NA	105786598	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.171	chr12	+	4997	7	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	36691	30	3554	-25	3prime_fragment	FALSE	canonical	3	889	junction_4	54.8138263174133	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	2973	False	NA	-18	True	NA	NA	NA	105787692	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.172	chr12	+	3546	4	NNC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	-744	-25	intron_retention	FALSE	canonical	2	3	junction_3	474.208814764129	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	9862	False	NA	-18	True	NA	NA	NA	105794581	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105794641_105795315_105795537_105800968_105801044_105801982
ES.8368.173	chr12	+	2510	4	ISM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	44313	30	-11	-25	3prime_fragment	FALSE	canonical	3	889	junction_1	19.0671328614335	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105795314	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.174	chr12	+	4079	2	ISM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	48014	-1671	3819	0	3prime_fragment	FALSE	canonical	3	905	junction_1	0	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105799144	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105801044_105803023
ES.8368.18	chr12	+	4453	21	FSM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-175	-1673	3	2	multi-exon	FALSE	canonical	3	84	junction_19	453.97952597006	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGTTGGCTGGTTTCTT	NA	False	NA	14	True	AATAAA	-20	NA	105750955	105805205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.19	chr12	+	4507	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_13	458.77180510685	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750957	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784673_105785047_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.2	chr12	+	4513	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-97	0	intron_retention	FALSE	canonical	3	14	junction_1	447.931451266836	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750855	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.20	chr12	+	2442	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	-5	-1	5	1	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTTAAAGTCTGTAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	105750957	105801153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.21	chr12	+	4439	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	41	junction_9	463.255035050889	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750957	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.22	chr12	+	5581	1	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	-16310	mono-exon	FALSE	NA	NA	NA	NA	NA	1178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATCAGACTGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	105750957	105756538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751000_105756500
ES.8368.23	chr12	+	7048	20	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-3	0	intron_retention	FALSE	canonical	3	846	junction_10	388.102807866272	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750959	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.24	chr12	+	4495	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_2	451.761048953397	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750959	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766069_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.26	chr12	+	2456	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_20	458.291978344555	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCACCTCAGGGTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	105750962	105803117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800933_105801044_105803023
ES.8368.27	chr12	+	3555	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	1	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	451.408218982873	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750963	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023_105803143_105804063
ES.8368.3	chr12	+	1145	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-108	-4	-45	4	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTATTTCTGTGACATT	NA	False	NA	21	True	AATAAA	-24	NA	105750907	105775972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.30	chr12	+	4784	19	ISM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	1	3020	1	2627	5prime_fragment	FALSE	canonical	3	846	junction_12	382.178296087049	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCAATTTCTCTG	NA	False	NA	NA	False	ATTAAA	-20	NA	105750963	105798132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315
ES.8368.32	chr12	+	4434	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	canonical	2	7	junction_1	448.787623565712	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750963	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765981_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.33	chr12	+	4491	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	canonical	1	5	junction_11	459.372025265331	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750963	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779471_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.34	chr12	+	3752	20	ISM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-167	1000	1	-585	5prime_fragment	FALSE	canonical	3	84	junction_19	459.996164021101	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGAGTTAAATTATT	NA	False	NA	36	True	AATAAA	-30	NA	105750963	105802532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968
ES.8368.35	chr12	+	3339	21	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	1	-620	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	515.472802386314	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTTGTGATACAAT	NA	False	NA	1	True	ATTAAA	-11	NA	105750963	105802497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105801421
ES.8368.38	chr12	+	6540	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	1	-4105	1	54	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAATTAATTAGTTCTA	NA	False	NA	66	True	NA	NA	NA	105750963	105805257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.39	chr12	+	4342	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_1	511.525307291829	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750963	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.4	chr12	+	5597	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-42	2	intron_retention	FALSE	canonical	2	3	junction_21	457.427708871618	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105750910	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801982
ES.8368.40	chr12	+	4407	21	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	450.524516536004	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750963	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767018_105772770_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.42	chr12	+	5278	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-52	-4193	1	-167	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACTCGAGCCTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	105750963	105780161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.43	chr12	+	4482	21	NNC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	1	4	intron_retention	FALSE	canonical	0	0	junction_19	464.692209962681	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGGCTGGTTTCTTTT	NA	False	NA	16	True	AATAAA	-22	NA	105750963	105805207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800933_105801044_105803023
ES.8368.44	chr12	+	4404	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	1	-1969	1	4	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCAGGGTCCATAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	105750963	105803121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.45	chr12	+	4348	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	3	-25	intron_retention	FALSE	non_canonical	0	0	junction_20	562.148796886794	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750965	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800986_105801031_105803017
ES.8368.46	chr12	+	3891	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-2	-127	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGGTGTGTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	105750967	105802990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.48	chr12	+	4299	21	NIC	ENSMUSG00000021111.16	novel	2436	21	NA	NA	-2	4	intron_retention	FALSE	canonical	3	14	junction_1	455.19163821406	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTCAGGGTCCATAAAC	NA	False	NA	NA	False	AATAAA	-22	NA	105750967	105803121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.49	chr12	+	3435	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-581	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTTAAATTATTGTTC	NA	False	NA	40	True	AATAAA	-34	NA	105750969	105802536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.50	chr12	+	4186	19	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	521.559899143964	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750969	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.51	chr12	+	4221	19	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	482.837932577591	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750969	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.54	chr12	+	4259	20	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	448.159919023768	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750969	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.55	chr12	+	4491	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	438.64937004545	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCATAGTTGGCTGGTT	NA	False	NA	10	True	AATAAA	-16	NA	105750969	105805201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772849_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.56	chr12	+	4460	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	-27	intron_retention	FALSE	canonical	0	0	junction_20	458.664239235785	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAACACAATAAAAAAAA	NA	False	NA	-20	True	NA	NA	NA	105750970	105805171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800975_105801044_105803023
ES.8368.57	chr12	+	4507	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	-25	intron_retention	FALSE	non_canonical	0	0	junction_16	522.239764746123	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750970	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793199_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800933_105801044_105803023
ES.8368.58	chr12	+	4333	20	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	1	-25	intron_retention	FALSE	canonical	3	41	junction_9	531.273575654169	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750970	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.6	chr12	+	1966	12	FSM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	-78	188	-39	-188	multi-exon	FALSE	canonical	3	944	junction_9	335.398664968735	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAACAAGAACCAA	NA	False	NA	NA	False	AATAAA	-5	NA	105750913	105780140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456
ES.8368.60	chr12	+	4515	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_9	458.903781061029	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCCATAGTTGGCTG	NA	False	NA	7	True	AATAAA	-13	NA	105750970	105805198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777274_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.61	chr12	+	4491	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_21	457.801118331507	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750970	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801031_105803018
ES.8368.62	chr12	+	6000	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	canonical	3	14	junction_1	503.215105274942	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750970	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.64	chr12	+	4473	21	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_12	463.212313631665	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750970	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779570_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.65	chr12	+	3287	9	NNC	ENSMUSG00000021111.16	novel	1033	9	NA	NA	1	511	intron_retention	FALSE	canonical	1	5	junction_1	575.251996411138	1248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGAGCTGTTCTTCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	105750970	105778182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765914_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ES.8368.66	chr12	+	4385	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	122	junction_14	451.400407066719	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750974	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.67	chr12	+	4501	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_19	457.299977958965	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750974	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795543_105799358_105799422_105800968_105801044_105803023
ES.8368.68	chr12	+	4520	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	2	2	intron_retention	FALSE	canonical	1	1	junction_13	510.418587335454	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATAGTTGGCTGGT	NA	False	NA	9	True	AATAAA	-15	NA	105750976	105805200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105781773_105781804_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.7	chr12	+	4558	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_6	445.601883466344	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750929	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774795_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.71	chr12	+	4597	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_10	460.536087107563	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCCATAGTTGGCTG	NA	False	NA	7	True	AATAAA	-13	NA	105750976	105805198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778423_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.72	chr12	+	3823	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	3	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	451.408218982873	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750977	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023_105803425_105804063
ES.8368.75	chr12	+	4210	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	17	-1791	5	-174	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTAAGGCGGTGGGACAC	NA	False	NA	NA	False	AATAAA	-17	NA	105750979	105802943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ES.8368.76	chr12	+	5659	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	5	intron_retention	FALSE	canonical	3	846	junction_11	384.810290922683	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGGCTGGTTTCTTTTG	NA	False	NA	17	True	AATAAA	-23	NA	105750979	105805208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.77	chr12	+	2582	17	NNC	ENSMUSG00000021111.16	novel	2544	20	NA	NA	5	-2622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	500.595130195051	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGCTGTCATTCTCC	NA	False	NA	NA	False	AATAAA	-35	NA	105750979	105792883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105792008
ES.8368.78	chr12	+	6029	21	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	5	0	intron_retention	FALSE	canonical	3	65	junction_20	515.472802386314	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750979	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105801421
ES.8368.79	chr12	+	4231	20	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	-25	intron_retention	FALSE	canonical	1	25	junction_7	430.342336188051	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750979	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.8	chr12	+	6137	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-15	3	intron_retention	FALSE	canonical	3	65	junction_21	449.844346977859	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTTGGCTGGTTTCTTT	NA	False	NA	15	True	AATAAA	-21	NA	105750937	105805206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.81	chr12	+	1405	10	ISM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	-12	2650	5	7	5prime_fragment	FALSE	canonical	3	944	junction_9	257.973776062224	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTATTTGCTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	105750979	105777678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295
ES.8368.82	chr12	+	4320	20	ISM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-151	416	5	-1	intron_retention	FALSE	canonical	3	84	junction_19	459.996164021101	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCACCTCAGGGTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	105750979	105803116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968
ES.8368.85	chr12	+	7831	19	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	0	intron_retention	FALSE	canonical	3	846	junction_9	393.013602001285	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750979	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.86	chr12	+	3378	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	-613	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	515.871699143619	1337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGATACAATTTTTTTT	NA	False	NA	8	True	AATAAA	-2	NA	105750979	105802504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779471_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.87	chr12	+	5990	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	-25	intron_retention	FALSE	canonical	2	7	junction_1	503.950911837602	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750979	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765981_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
ES.8368.89	chr12	+	4287	20	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	5	-25	intron_retention	FALSE	canonical	2	84	junction_18	520.79890153962	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750979	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ES.8368.9	chr12	+	4314	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	-14	80	-14	-80	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACGTGGATCTTTTC	NA	False	NA	NA	False	AATAAA	-34	NA	105750938	105804986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.91	chr12	+	4382	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_15	511.590251113148	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750979	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789821_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.92	chr12	+	5152	19	ISM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	17	2636	5	-2636	5prime_fragment	FALSE	canonical	3	846	junction_12	382.178296087049	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTACTTTTAATTTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	105750979	105798516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315
ES.8368.93	chr12	+	3306	21	NNC	ENSMUSG00000021111.16	novel	4356	21	NA	NA	8	-620	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	537.610695578129	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTTGTGATACAAT	NA	False	NA	1	True	ATTAAA	-11	NA	105750982	105802497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800933_105801044_105801421
ES.8368.95	chr12	+	4512	22	NNC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_5	501.184927013732	1382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750984	105805203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773431_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800933_105801044_105803023
ES.8368.96	chr12	+	4270	23	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	-6	-25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	451.408218982873	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750985	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023_105804424_105804607
ES.8368.97	chr12	+	12868	18	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	-6	-25	intron_retention	FALSE	canonical	3	880	junction_10	389.393228632947	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACACAATAAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	105750985	105805173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8368.98	chr12	+	2483	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	33	1864	-6	85	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAGGAGATTGGAGG	NA	False	NA	NA	False	NA	NA	NA	105750985	105803202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ES.8369.1	chr12	-	175	1	Intergenic	novelGene_6914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGCTAGATAAG	NA	False	NA	NA	False	NA	NA	NA	105763877	105763702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105763700_105763900
ES.837.1	chr1	-	2752	7	NNC	ENSMUSG00000054702.15	novel	2876	5	NA	NA	1	9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	8.03464719546263	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCCTTCATGACTGT	NA	False	NA	NA	False	NA	NA	NA	79649681	79584583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79584845_79585161_79586920_79590617_79590810_79591919_79592058_79601398_79601508_79602823_79603003_79649566
ES.837.2	chr1	-	2712	7	NNC	ENSMUSG00000054702.15	novel	2876	5	NA	NA	46679	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.82546819658248	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATGTTAATGTTGAA	NA	False	NA	NA	False	NA	NA	NA	79603003	79584605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79584845_79585161_79586920_79590617_79590810_79591919_79592058_79593557_79593654_79601398_79601508_79602823
ES.837.4	chr1	-	3791	2	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATAAGGGAGAGTATAG	NA	False	NA	NA	False	NA	NA	NA	79633935	79627650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_79630197_79632690
ES.837.5	chr1	-	1470	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTATGGTGCACTGAGG	NA	False	NA	NA	False	AGTAAA	-12	NA	79642999	79641529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_79641500_79643000
ES.8370.1	chr12	-	4613	1	Antisense	novelGene_ENSMUSG00000021111.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAGCATAAATGGGTG	NA	False	NA	NA	False	NA	NA	NA	105805516	105800903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_105800900_105805500
ES.8371.1	chr12	-	173	1	Intergenic	novelGene_6915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGGGGCGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	105807106	105806933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105806900_105807100
ES.8372.1	chr12	-	229	1	Intergenic	novelGene_6916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGTGACAAACACTAG	NA	False	NA	NA	False	NA	NA	NA	105859060	105858831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105858800_105859100
ES.8373.1	chr12	-	172	1	Intergenic	novelGene_6917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGACTGAAACAATCA	NA	False	NA	NA	False	NA	NA	NA	105860422	105860250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_105860200_105860400
ES.8374.1	chr12	+	168	1	Intergenic	novelGene_6918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGTAAGGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	105932653	105932821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105932700_105932800
ES.8375.1	chr12	+	181	1	Intergenic	novelGene_6919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAACACAGGCTAGGAG	NA	False	NA	NA	False	NA	NA	NA	105975725	105975906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_105975700_105975900
ES.8376.1	chr12	+	1643	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-128	2196	-64	10	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCGTCATAACCCATGT	NA	False	NA	NA	False	TATAAA	-12	NA	105976422	106041489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.10	chr12	+	1591	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-59	210	-26	-1	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976515	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ES.8376.11	chr12	+	4646	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-34	-901	-25	901	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTGTCTCTAATT	NA	False	NA	11	True	ATTAAA	-23	NA	105976516	106044586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.12	chr12	+	1721	14	NIC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	-20	-14	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	331.233913308169	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCGGTCTTTTACACAA	NA	False	NA	9	True	AATAAA	-15	NA	105976521	106041654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
ES.8376.13	chr12	+	1711	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-29	2029	-20	-12	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976521	106041656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.14	chr12	+	1452	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	36	21	-19	-1	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976522	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.15	chr12	+	3717	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-18	-15	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	281.394015067798	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACGATCTCTTCTGTTT	NA	False	NA	2	True	NA	NA	NA	105976523	106043670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.16	chr12	+	4623	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	37	-3151	-18	945	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGCTTTAGTCTATT	NA	False	NA	55	True	TTTAAA	-19	NA	105976523	106044630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.17	chr12	+	4315	11	NIC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	14	junction_10	293.451938143199	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976524	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106037901_106041265
ES.8376.19	chr12	+	1300	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	40	169	-15	-149	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATCTTCTCTGCCTATT	NA	False	NA	NA	False	AGTAAA	-13	NA	105976526	106041310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.20	chr12	+	1284	9	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-15	-14	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCGGTCTTTTACACAA	NA	False	NA	9	True	AATAAA	-15	NA	105976526	106041654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.21	chr12	+	3672	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	41	-2204	-14	-2	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTTGTTTATTTGTT	NA	False	NA	15	True	NA	NA	NA	105976527	106043683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.22	chr12	+	1438	14	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	365.447573523321	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAGGGTAATTTATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	105976527	106041457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106001742_106001805_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.23	chr12	+	3570	12	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-14	-5	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	379.953846696983	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTTTTGTTTATTT	NA	False	NA	12	True	NA	NA	NA	105976527	106043680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022066_106022170_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.24	chr12	+	4758	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	42	-3291	-13	1085	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	105976528	106044770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.25	chr12	+	2917	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-21	815	-12	-815	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGTATACTGTAGC	NA	False	NA	21	True	GATAAA	-16	NA	105976529	106042870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.26	chr12	+	3723	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_11	269.038568757883	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTGTTTTTGTTTATT	NA	False	NA	11	True	NA	NA	NA	105976529	106043679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106039877_106039938_106041265
ES.8376.27	chr12	+	3643	5	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	-12	893	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	395.239405297599	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTTTTTTTTTTTTGT	NA	False	NA	3	True	ATTAAA	-15	NA	105976529	106044578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106036783_106036875_106041265
ES.8376.28	chr12	+	1555	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	-11	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	427.629154615949	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTTTGTGTAC	NA	False	NA	NA	False	TTTAAA	-14	NA	105976530	106041435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106001742_106001805_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
ES.8376.29	chr12	+	1333	10	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-9	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	394.301570368496	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTCCGGTCTTTTACACA	NA	False	NA	8	True	AATAAA	-14	NA	105976532	106041653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025932_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.3	chr12	+	1778	15	NNC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	-34	-16	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	357.846421282217	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTCCGGTCTTTTACAC	NA	False	NA	7	True	AATAAA	-13	NA	105976452	106041652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ES.8376.30	chr12	+	3267	11	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	-1	-7	intron_retention	FALSE	canonical	3	439	junction_10	171.977585748841	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTACTGAAGGGTAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	105976540	106041452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.31	chr12	+	2740	3	ISM	ENSMUSG00000021115.16	ENSMUST00000221312.2	2520	14	-1	29866	-1	2468	5prime_fragment	FALSE	canonical	3	906	junction_1	52.5	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAACCAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	105976540	106011593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105976618_106002798_106002964_106009095
ES.8376.33	chr12	+	1630	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	55	-176	0	-13	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	NA	False	NA	10	True	AATAAA	-16	NA	105976541	106041655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.34	chr12	+	4491	13	NIC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	0	-6	intron_retention	FALSE	canonical	3	543	junction_12	134.589783127183	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACTGAAGGGTAATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	105976541	106041453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106039938_106041265
ES.8376.35	chr12	+	5967	12	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	381.600327459707	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACTGAAGGGTAATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	105976543	106041453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106032154_106036875_106041265
ES.8376.36	chr12	+	1398	13	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-4	-3	combination_of_known_splicesites	FALSE	canonical	2	11	junction_4	301.400469567576	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAAGGGTAATTTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	105976546	106041456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.37	chr12	+	3775	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	-23	-2010	1	-7	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTGTTTTTGTTTAT	NA	False	NA	10	True	NA	NA	NA	105976551	106043678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ES.8376.38	chr12	+	2962	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	2	-815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	352.660420871097	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTGTATACTGTAGC	NA	False	NA	21	True	GATAAA	-16	NA	105976552	106042870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106001736_106001805_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.39	chr12	+	1667	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	5	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	288.648964751428	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCGGTCTTTTACACAA	NA	False	NA	9	True	AATAAA	-15	NA	105976555	106041654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002956_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.4	chr12	+	1826	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	-6	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	352.671126503699	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	NA	False	NA	10	True	AATAAA	-16	NA	105976480	106041655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106009587_106009663_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.40	chr12	+	1491	14	NIC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	5	-1	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	331.233913308169	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976555	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
ES.8376.43	chr12	+	1279	12	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	10	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	373.606855724876	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTTTGTGTAC	NA	False	NA	NA	False	TTTAAA	-14	NA	105976560	106041435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106041265
ES.8376.44	chr12	+	5799	12	ISM	ENSMUSG00000021115.16	ENSMUST00000221312.2	2520	14	20	6	11	-6	intron_retention	FALSE	canonical	3	844	junction_5	71.896849894786	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACTGAAGGGTAATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	105976561	106041453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783
ES.8376.45	chr12	+	1474	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-10	9	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	281.394015067798	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATAAAATTCTGAATC	NA	False	NA	NA	False	ATTAAA	-31	NA	105976564	106041468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.46	chr12	+	4708	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	14	-1011	-10	1011	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAGAAATATTTAAT	NA	False	NA	NA	False	TTTAAA	-14	NA	105976564	106044696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.47	chr12	+	1520	12	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	439	junction_11	166.480138045463	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976564	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.48	chr12	+	1698	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_12	325.723691906787	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976564	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037672_106037901_106039877_106039938_106041265
ES.8376.49	chr12	+	1441	12	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-9	-13	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	306.784038504274	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	NA	False	NA	10	True	AATAAA	-16	NA	105976565	106041655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.5	chr12	+	3703	14	NNC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	273.081235068881	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTTTTGTTTATTT	NA	False	NA	12	True	NA	NA	NA	105976483	106043680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.50	chr12	+	2341	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	18	1352	-6	665	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATTTCAAGAGACCTT	NA	False	NA	NA	False	AATAAA	-25	NA	105976568	106042333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.51	chr12	+	3669	5	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	-1	893	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	400.29770171711	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTTTTTTTTTTTTGT	NA	False	NA	3	True	ATTAAA	-15	NA	105976573	106044578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106036783_106036875_106041265
ES.8376.52	chr12	+	4449	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	88	-3028	0	822	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGCTGTCCTGTCTTC	NA	False	NA	-68	True	NA	NA	NA	105976574	106044507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.53	chr12	+	1602	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	397.055900038146	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976579	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_105976900_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036954_106039877_106039938_106041265
ES.8376.54	chr12	+	1031	9	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	9	-1	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976583	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.56	chr12	+	6348	11	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	10	892	intron_retention	FALSE	canonical	3	439	junction_10	171.977585748841	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGTTTTTTTTTTTTG	NA	False	NA	2	True	ATTAAA	-14	NA	105976584	106044577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.57	chr12	+	1708	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	18	16	18	-16	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTCCGGTCTTTTACAC	NA	False	NA	7	True	AATAAA	-13	NA	105976592	106041652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ES.8376.58	chr12	+	1732	13	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	294.09648596261	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976593	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.59	chr12	+	1873	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	43	1795	19	222	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTCTAGAGATGTTTG	NA	False	NA	NA	False	NA	NA	NA	105976593	106041890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.6	chr12	+	1472	14	NNC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	273.081235068881	447	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAGGGTAATTTATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	105976491	106041457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.60	chr12	+	2319	14	FSM	ENSMUSG00000021115.16	ENSMUST00000221312.2	2520	14	52	149	19	-149	multi-exon	FALSE	canonical	3	129	junction_12	248.778292970376	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATCTTCTCTGCCTATT	NA	False	NA	NA	False	AGTAAA	-13	NA	105976593	106041310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106037901_106039877_106039938_106041265
ES.8376.61	chr12	+	1930	13	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	19	-12	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	294.09648596261	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976593	106041656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.62	chr12	+	1474	15	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	19	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348.979832467992	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAATTTTTTGTGTAC	NA	False	NA	NA	False	TTTAAA	-14	NA	105976593	106041435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976618_105976912_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.63	chr12	+	527	5	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	400.29770171711	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGGGTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	105976595	106041458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106036783_106036875_106041265
ES.8376.64	chr12	+	5700	12	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	22	-12	intron_retention	FALSE	canonical	3	514	junction_10	183.64014397549	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	NA	False	NA	11	True	AATAAA	-17	NA	105976596	106041656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ES.8376.65	chr12	+	2542	11	NNC	ENSMUSG00000021115.16	novel	2520	14	NA	NA	20092	-13	intron_retention	FALSE	canonical	3	69	junction_8	347.768658737385	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGGTCTTTTACACAAG	6760	False	NA	10	True	AATAAA	-16	NA	106017067	106041655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106037901_106039877_106039938_106041265
ES.8376.66	chr12	+	2466	9	ISM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	41543	-1390	21054	-816	3prime_fragment	FALSE	canonical	3	439	junction_8	192.789230767696	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTCTGTATACTGTAG	7722	False	NA	20	True	GATAAA	-15	NA	106018029	106042869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.67	chr12	+	3985	7	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	22173	-16	intron_retention	FALSE	canonical	3	439	junction_6	220.020011716106	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTGTACTTTACTGA	8841	False	NA	NA	False	ATTAAA	-6	NA	106019148	106041443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.68	chr12	+	5074	6	NIC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	23026	-12	intron_retention	FALSE	canonical	3	439	junction_5	237.058305064387	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTCTTTTACACAAGC	9694	False	NA	11	True	AATAAA	-17	NA	106020001	106041656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.69	chr12	+	173	1	Intergenic	novelGene_6920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	106025031	106025204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_106025000_106025200
ES.8376.7	chr12	+	3618	13	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	22	-5	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	279.190794977198	454	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTTTTGTTTATTT	NA	False	NA	12	True	NA	NA	NA	105976508	106043680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_105976548_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ES.8376.70	chr12	+	2003	4	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	32156	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.946584627263	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAAGGGTAATTTATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	106029131	106041457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_106029467_106031339_106032725_106036783_106036875_106041265
ES.8376.8	chr12	+	2543	14	FSM	ENSMUSG00000021115.16	ENSMUST00000221312.2	2520	14	-26	3	-26	-3	multi-exon	FALSE	canonical	3	129	junction_12	248.778292970376	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAAGGGTAATTTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	105976515	106041456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106037901_106039877_106039938_106041265
ES.8377.1	chr12	+	8009	1	FSM	ENSMUSG00000113427.2	ENSMUST00000222979.2	4288	1	-3722	1	-3722	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTGTTGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-14	NA	106046906	106054915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_106046900_106054900
ES.8378.1	chr12	-	9794	1	Antisense	novelGene_ENSMUSG00000021115.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGCAGCAAAGCAGTCC	NA	False	NA	NA	False	NA	NA	NA	106048097	106038303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_106038300_106048100
ES.8378.2	chr12	-	1452	1	Intergenic	novelGene_6921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106049456	106048004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_106048000_106049500
ES.8379.1	chr12	+	159	1	Intergenic	novelGene_6922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	106057257	106057416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_106057300_106057400
ES.838.1	chr1	+	1943	2	Antisense	novelGene_ENSMUSG00000073643.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCCTAAGAACCCATGT	NA	False	NA	NA	False	NA	NA	NA	79723878	79725955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_79725391_79725524
ES.8380.1	chr12	-	426	1	Intergenic	novelGene_6923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	106138533	106138107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_106138100_106138500
ES.8380.2	chr12	-	172	1	Intergenic	novelGene_6924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	106138532	106138360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_106138400_106138500
ES.8381.1	chr12	+	2360	1	Intergenic	novelGene_6925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATATACTTTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-7	NA	106140462	106142822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_106140500_106142800
ES.8382.1	chr12	-	5708	4	NNC	ENSMUSG00000048251.16	novel	8111	4	NA	NA	-2754	-2194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGCCATAATATATTT	8180	False	NA	NA	False	NA	NA	NA	107972615	107878855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_107883674_107931930_107932147_107955723_107956090_107972307
ES.8382.2	chr12	-	4993	2	NNC	ENSMUSG00000048251.16	novel	2522	2	NA	NA	22604	-2194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGCCATAATATATTT	9583	False	NA	NA	False	NA	NA	NA	107947069	107878855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_107883674_107946894
ES.8382.3	chr12	-	5215	3	NNC	ENSMUSG00000048251.16	novel	8111	4	NA	NA	23501	-2194	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGCCATAATATATTT	NA	False	NA	NA	False	NA	NA	NA	107946172	107878855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_107883674_107931930_107932147_107945991
ES.8382.4	chr12	-	5316	3	FSM	ENSMUSG00000048251.16	ENSMUST00000109891.3	2888	3	193	-2621	193	-2198	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGGCTGCCATAATAT	5468	False	NA	NA	False	NA	NA	NA	107969480	107878859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_107883674_107955723_107956090_107969344
ES.8382.5	chr12	-	1185	1	ISM	ENSMUSG00000048251.16	ENSMUST00000066060.11	8111	4	89473	2542	89285	2277	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTTGAATTTTTATTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	107880388	107879203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_107879200_107880400
ES.8382.6	chr12	-	2692	2	NNC	ENSMUSG00000048251.16	novel	2522	2	NA	NA	22638	358	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCGTTTTCATCATTT	9617	False	NA	NA	False	TTTAAA	-3	NA	107947035	107881122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_107883674_107946894
ES.8383.1	chr12	-	221	1	Intergenic	novelGene_6926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTACTATTAAATTCG	NA	False	NA	NA	False	NA	NA	NA	108038514	108038293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108038300_108038500
ES.8384.1	chr12	-	178	1	Intergenic	novelGene_6927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATCCA	NA	False	NA	NA	False	NA	NA	NA	108065897	108065719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108065700_108065900
ES.8385.1	chr12	+	3392	1	Intergenic	novelGene_6928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCCAGCAAGCAACAAGG	NA	False	NA	NA	False	NA	NA	NA	108088719	108092111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108088700_108092100
ES.8386.1	chr12	+	2749	1	Intergenic	novelGene_6929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAGACAAGACTAGACAA	NA	False	NA	NA	False	NA	NA	NA	108116692	108119441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108116700_108119400
ES.8387.1	chr12	+	1038	1	Intergenic	novelGene_6930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108130147	108131185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108130100_108131200
ES.8388.1	chr12	-	2790	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-36	1	-36	-1	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTGTTCCTTGT	NA	False	NA	-1	True	ATTAAA	-18	NA	108145609	108072690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.11	chr12	-	4759	5	FSM	ENSMUSG00000056770.16	ENSMUST00000148119.8	3056	5	-1478	-225	-1342	-10	multi-exon	FALSE	canonical	3	471	junction_1	36.8069286955595	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGGTGTTTTTGTTT	NA	False	NA	-10	True	ATTAAA	-9	NA	108082684	108072699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577
ES.8388.12	chr12	-	2844	12	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	364	-21	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_11	191.857557354537	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAACCATGACTGG	NA	False	NA	-21	True	AGTAAA	-11	NA	108145108	108072710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108144687
ES.8388.13	chr12	-	2725	13	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	1	-21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	145.269194562677	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAACCATGACTGG	NA	False	NA	-21	True	AGTAAA	-11	NA	108145572	108072710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085372_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.15	chr12	-	2626	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-37	166	-37	69	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTCGAGTCCTCGTTTT	NA	False	NA	2	True	ATTAAA	-28	NA	108145610	108072855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.16	chr12	-	5917	4	NIC	ENSMUSG00000056770.16	novel	3056	5	NA	NA	-1835	68	intron_retention	FALSE	canonical	3	471	junction_1	37.3214266727424	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACTCGAGTCCTCGTTT	NA	False	NA	1	True	ATTAAA	-27	NA	108083177	108072856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108078556_108079577
ES.8388.17	chr12	-	2745	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-35	67	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTCGAGTCCTCGTT	NA	False	NA	0	True	ATTAAA	-26	NA	108145608	108072857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
ES.8388.18	chr12	-	2753	15	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	67	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	243.702603973929	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTCGAGTCCTCGTT	NA	False	NA	0	True	ATTAAA	-26	NA	108145592	108072857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078473_108079577_108079653_108084309_108084417_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
ES.8388.19	chr12	-	2442	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-5	66	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGGACTCGAGTCCTCGT	NA	False	NA	-1	True	ATTAAA	-25	NA	108145578	108072858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
ES.8388.2	chr12	-	2625	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-20	-1	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTGTTCCTTGT	NA	False	NA	-1	True	ATTAAA	-18	NA	108145593	108072690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
ES.8388.20	chr12	-	2300	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	25	64	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	203.425072201044	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGACTCGAGTCCTC	NA	False	NA	-3	True	ATTAAA	-23	NA	108145548	108072860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108145411
ES.8388.21	chr12	-	5303	3	NNC	ENSMUSG00000056770.16	novel	3056	5	NA	NA	-207	64	intron_retention	FALSE	canonical	1	28	junction_1	224.5	478	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGACTCGAGTCCTC	NA	False	NA	-3	True	ATTAAA	-23	NA	108081549	108072860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073934_108074815_108074977_108077480
ES.8388.22	chr12	-	2489	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-20	64	combination_of_known_splicesites	FALSE	canonical	2	25	junction_5	143.90360639638	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGACTCGAGTCCTC	NA	False	NA	-3	True	ATTAAA	-23	NA	108145593	108072860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.23	chr12	-	2490	13	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	11	64	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	148.287516332293	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGACTCGAGTCCTC	NA	False	NA	-3	True	ATTAAA	-23	NA	108145562	108072860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078473_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.25	chr12	-	2414	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-6	62	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTAGGACTCGAGTCC	NA	False	NA	-5	True	ATTAAA	-21	NA	108145579	108072862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.26	chr12	-	4278	5	FSM	ENSMUSG00000056770.16	ENSMUST00000148119.8	3056	5	-1160	-62	-1024	62	multi-exon	FALSE	canonical	3	471	junction_1	36.8069286955595	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTAGGACTCGAGTCC	NA	False	NA	-5	True	ATTAAA	-21	NA	108082366	108072862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577
ES.8388.27	chr12	-	2272	12	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-12	59	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	190.696071631109	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGTAGGACTCGAG	NA	False	NA	-8	True	ATTAAA	-18	NA	108145498	108072865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078473_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
ES.8388.28	chr12	-	2330	12	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-10	59	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	211.518789584064	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGTAGGACTCGAG	NA	False	NA	-8	True	ATTAAA	-18	NA	108145496	108072865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074911_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108145407
ES.8388.3	chr12	-	2621	12	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	160.212616995754	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTTTTGTTTGTTC	NA	False	NA	-6	True	ATTAAA	-13	NA	108145551	108072695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108145407
ES.8388.32	chr12	-	2566	13	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-14	58	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	209.633807706041	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATCAAAGTAGGACTCGA	NA	False	NA	-9	True	ATTAAA	-17	NA	108145587	108072866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108133531_108133655_108145411
ES.8388.33	chr12	-	2784	13	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	153.030203082776	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTAAATCAAAGTAGGAC	NA	False	NA	-13	True	ATTAAA	-13	NA	108145592	108072870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084309_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.34	chr12	-	1936	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	-57	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTAGCTTCCCTATT	NA	False	NA	NA	False	TATAAA	-21	NA	108145592	108073353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.35	chr12	-	2125	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	-34	664	-34	-57	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTAGCTTCCCTATT	NA	False	NA	NA	False	TATAAA	-21	NA	108145607	108073353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.36	chr12	-	1943	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-6	-62	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAGATCTAGCTTCC	NA	False	NA	NA	False	TATAAA	-16	NA	108145579	108073358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
ES.8388.37	chr12	-	3465	1	Genic_Genomic	ENSMUSG00000056770.16	novel	NA	NA	NA	NA	-23	-17889	mono-exon	FALSE	NA	NA	NA	NA	NA	428	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGCCTAGAACTGGATT	NA	False	NA	NA	False	NA	NA	NA	108145596	108142131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_108142100_108145600
ES.8388.6	chr12	-	2907	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-37	-8	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	-8	True	ATTAAA	-11	NA	108145610	108072697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
ES.8388.7	chr12	-	2988	13	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	382	-8	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_12	148.223625159944	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	-8	True	ATTAAA	-11	NA	108145090	108072697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108144687
ES.8388.8	chr12	-	2683	13	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	-19	-8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	148.287516332293	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	-8	True	ATTAAA	-11	NA	108145592	108072697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078473_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8388.9	chr12	-	2818	14	NNC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	13	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	192.420828259128	486	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGGTGTTTTTGTTTGT	NA	False	NA	-8	True	ATTAAA	-11	NA	108145560	108072697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108119968_108120053_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ES.8389.1	chr12	+	2717	13	NNC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	-48	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	29.6932231325601	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	25	True	AATAAA	-18	NA	108145789	108169617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108145816_108145969_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162564_108162632_108165567_108165643_108168334
ES.8389.2	chr12	+	2812	12	FSM	ENSMUSG00000021258.11	ENSMUST00000221167.2	2789	12	-22	-1	-22	1	multi-exon	FALSE	canonical	3	54	junction_11	12.5217166726353	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTATGTGTGAGTACAGC	NA	False	NA	25	True	AATAAA	-18	NA	108145815	108169617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108146140_108148435_108148468_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ES.8389.4	chr12	+	2458	10	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	64	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_9	27.9761803444764	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTTATGTGTGAGTACA	NA	False	NA	23	True	AATAAA	-16	NA	108146060	108169615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108168334
ES.8389.5	chr12	+	2525	11	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	72	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	19.4483932498291	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTTATGTGTGAGTACA	NA	False	NA	23	True	AATAAA	-16	NA	108146068	108169615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ES.839.1	chr1	-	2613	13	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	134	27358	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	190.299471593825	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATTGGTTAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79739304	79652620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79652631_79681744_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.10	chr1	-	4525	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	195.968499745653	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739446	79679978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685154_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.11	chr1	-	4195	9	ISM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	39507	2	394	-2	3prime_fragment	FALSE	canonical	3	564	junction_7	43.8019334618918	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	79699979	79679980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79699930
ES.839.12	chr1	-	5353	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	256.574091565789	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	79739443	79679980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79690723_79691681_79692590_79692714_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.14	chr1	-	6500	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.102819951477	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	79739430	79679980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79689567_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.19	chr1	-	4412	13	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.299471593825	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGTAATTTTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	79739431	79679981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79680444_79680524_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.2	chr1	-	3931	7	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	7654	27358	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	249.63490007075	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATTGGTTAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79692719	79652620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79652663_79679975_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590
ES.839.20	chr1	-	5358	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	254.704852689286	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTGTAATTTTGTTT	NA	False	NA	-3	True	AATAAA	-20	NA	79739431	79679981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685154_79685300_79686809_79686912_79690723_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.21	chr1	-	5960	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	6	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	298.201412881677	670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTGTAATTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	79739432	79679982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685212_79685300_79686809_79686912_79690723_79691681_79692590_79692718_79702361_79703135_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.22	chr1	-	4475	12	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	198.531634550656	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTGTGTAATTTTGTT	NA	False	NA	-4	True	AATAAA	-19	NA	79739425	79679982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79684070_79685168_79685289_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.23	chr1	-	4272	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	48	231	0	-231	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTTTTGTTTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	79739438	79680209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.24	chr1	-	4125	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	37	389	6	-389	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAAGTGTCTGTTGCTT	NA	False	NA	NA	False	AATATA	-9	NA	79739449	79680367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.25	chr1	-	3736	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	0	-781	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	195.968499745653	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTTTACTGGTCCTTT	NA	False	NA	2	True	AATAAA	-26	NA	79739438	79680759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685154_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.26	chr1	-	3745	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	24	782	-7	-782	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTACTGGTCCTT	NA	False	NA	1	True	AATAAA	-25	NA	79739462	79680760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.27	chr1	-	3752	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	12	-784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197.340415701958	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTCTTTACTGGTCC	NA	False	NA	-1	True	AATAAA	-23	NA	79739426	79680762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684115_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.28	chr1	-	3709	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113515.8	4551	12	52	790	4	-790	multi-exon	FALSE	canonical	3	564	junction_7	60.8834410035254	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCAATGTGTTCTTTAC	NA	False	NA	-7	True	AATAAA	-17	NA	79739434	79680768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.29	chr1	-	3165	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	53	1333	5	-1333	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGGATATCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	79739433	79681311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.3	chr1	-	5499	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	3	-951	3	951	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTAATCTACCCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79739483	79679027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.30	chr1	-	2628	10	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	10	1359	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	218.475526216452	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAGAAAAGCTATGGGG	NA	False	NA	NA	False	NA	NA	NA	79739428	79681714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79717778_79717847_79739280
ES.839.31	chr1	-	3089	13	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	-899	1359	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	190.03557780935	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAGAAAAGCTATGGGG	NA	False	NA	NA	False	NA	NA	NA	79740663	79681714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280_79739602_79740504
ES.839.32	chr1	-	2769	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	12	1359	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	195.968499745653	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCAGAAAAGCTATGGGG	NA	False	NA	NA	False	NA	NA	NA	79739426	79681714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685154_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.33	chr1	-	3614	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	1	1356	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	192.348383997491	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGGCAGAAAAGCTATG	NA	False	NA	NA	False	NA	NA	NA	79739437	79681717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79690723_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.35	chr1	-	4752	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	1	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	198.102819951477	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79739454	79681752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79689567_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.36	chr1	-	2493	11	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	14	1321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	208.410556354519	653	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79739424	79681752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704312_79711561_79711591_79717778_79717847_79739280
ES.839.37	chr1	-	5969	3	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	10469	1321	intron_retention	FALSE	canonical	3	633	junction_2	25	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79689904	79681752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79685300_79686809
ES.839.38	chr1	-	2756	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	2	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	197.144742731773	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79739436	79681752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683317_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.39	chr1	-	2430	9	ISM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	39500	1774	387	1321	3prime_fragment	FALSE	canonical	3	564	junction_7	43.8019334618918	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	79699986	79681752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79699930
ES.839.4	chr1	-	10099	11	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	18	951	intron_retention	FALSE	canonical	3	564	junction_6	61.9092884791935	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTAATCTACCCTGCAG	NA	False	NA	NA	False	NA	NA	NA	79739420	79679027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.40	chr1	-	3310	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	13	1064	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	192.348383997491	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTGACTCTTGCTAAT	NA	False	NA	NA	False	NA	NA	NA	79739425	79682009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79690723_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.41	chr1	-	2471	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	49	2031	1	1064	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGTGACTCTTGCTAAT	NA	False	NA	NA	False	NA	NA	NA	79739437	79682009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.42	chr1	-	3180	9	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	37	1061	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	219.02678917201	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCGTGTGACTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	79700336	79682012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695693_79696840_79696992_79699930
ES.839.43	chr1	-	1569	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	56	2926	8	169	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAACTTCTTAAATGCAA	NA	False	NA	NA	False	AAAAAG	-9	NA	79739430	79682904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.44	chr1	-	1457	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	16	3078	-15	17	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGGAAATTGTCTAAAAG	NA	False	NA	-14	True	TATAAA	-18	NA	79739470	79683056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.45	chr1	-	6073	11	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	12	14	intron_retention	FALSE	canonical	3	564	junction_6	61.9092884791935	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGGAAATTGTCTAA	NA	False	NA	-17	True	TATAAA	-15	NA	79739426	79683059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.46	chr1	-	2242	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	192.348383997491	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATAAAGGTGTGTTTG	NA	False	NA	-41	True	AAGAAA	-5	NA	79739431	79683083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79690723_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.47	chr1	-	1608	13	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	12	-22	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	252.725298276387	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAATCTATATA	NA	False	NA	-53	True	AAAACA	-15	NA	79739426	79683095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79702917_79703041_79704171_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.48	chr1	-	2340	13	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	2	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.228319556252	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAATCTATATA	NA	False	NA	-53	True	AAAACA	-15	NA	79739436	79683095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685212_79685300_79686809_79686912_79689567_79689717_79690723_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.49	chr1	-	1326	12	NNC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	15	-23	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	197.065957830208	610	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAAAAAAATCTATAT	NA	False	NA	-54	True	AAAACA	-14	NA	79739423	79683096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_79683288_79683960_79684070_79685212_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.5	chr1	-	9110	10	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	1	0	intron_retention	FALSE	canonical	1	3	junction_7	218.206890160646	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739437	79679978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79711516_79711591_79717778_79717847_79739280
ES.839.50	chr1	-	116	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAATCATACTT	NA	False	NA	NA	False	NA	NA	NA	79686667	79686551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_79686600_79686700
ES.839.51	chr1	-	689	5	NIC	ENSMUSG00000073643.12	novel	1359	11	NA	NA	6	4178	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	303.855537221226	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTACGGTGTTCTCCCT	NA	False	NA	NA	False	AGTAAA	-10	NA	79739432	79692512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79692718_79694919_79695033_79696840_79696992_79717778_79717847_79739280
ES.839.52	chr1	-	1591	5	FSM	ENSMUSG00000073643.12	ENSMUST00000048820.14	717	5	48	-922	0	-784	multi-exon	FALSE	canonical	3	590	junction_1	81.1984451821585	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTATATTCTAAGTG	NA	False	NA	NA	False	NA	NA	NA	79739438	79703197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.53	chr1	-	649	5	FSM	ENSMUSG00000073643.12	ENSMUST00000048820.14	717	5	62	6	14	-6	multi-exon	FALSE	canonical	3	590	junction_1	81.1984451821585	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACTGTTAATTATTTT	NA	False	NA	NA	False	CATAAA	-12	NA	79739424	79704125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.54	chr1	-	2311	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79735401	79733090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_79733100_79735400
ES.839.6	chr1	-	4571	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	-20	0	-20	0	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739506	79679978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.839.8	chr1	-	4523	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113515.8	4551	12	28	0	-3	0	multi-exon	FALSE	canonical	3	564	junction_7	60.8834410035254	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739458	79679978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ES.8390.1	chr12	+	177	1	Intergenic	novelGene_6931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTTTGTTTTTAAA	1175	False	NA	NA	False	NA	NA	NA	108188353	108188530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108188400_108188500
ES.8391.1	chr12	+	3440	1	Intergenic	novelGene_6932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGACTGTATGAACTGCA	4613	False	NA	NA	False	NA	NA	NA	108193757	108197197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108193800_108197200
ES.8392.1	chr12	+	215	1	Intergenic	novelGene_6933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	108224377	108224592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108224400_108224600
ES.8393.1	chr12	-	4437	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	-134	-5	-134	5	multi-exon	TRUE	canonical	3	57	junction_4	9.83056458195561	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTAGTGCTTTTTT	NA	False	NA	-2	True	AATAAA	-24	NA	108241818	108169855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
ES.8393.10	chr12	-	3350	6	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	50912	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	30.2416930742973	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCCGAGTGTGTAGTGC	NA	False	NA	-8	True	AATAAA	-18	NA	108190480	108169861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108190339
ES.8393.11	chr12	-	4032	4	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.7064958744707	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCGGAGCCGAGTGTG	NA	False	NA	-14	True	AATAAA	-12	NA	108241694	108169867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108172662_108177815_108177882_108187967_108188042_108240596
ES.8393.12	chr12	-	1608	2	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	-2	-30184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGTAAAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	108241686	108202787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108203306_108240596
ES.8393.13	chr12	-	5279	3	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	-11	-62195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTGTATGATTGTTT	NA	False	NA	NA	False	TATAAA	-11	NA	108241695	108234798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108238833_108239414_108239561_108240596
ES.8393.3	chr12	-	4342	7	FSM	ENSMUSG00000084883.3	ENSMUST00000136175.3	1302	7	-294	-2746	-2	3	multi-exon	FALSE	canonical	2	6	junction_4	32.190405748021	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGTGTAGTGCTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	108241686	108169857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108183045_108183085_108187967_108188042_108240596
ES.8393.4	chr12	-	646	4	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	67177	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.0292285252044	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGTGTAGTGCTTT	5073	False	NA	-5	True	AATAAA	-21	NA	108174215	108169858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108170219_108172629_108172694_108173380_108173480_108174092
ES.8393.5	chr12	-	4202	5	NIC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	-10	2	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	31.586191603294	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGTGTAGTGCTTT	NA	False	NA	-5	True	AATAAA	-21	NA	108241694	108169858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108172694_108173380_108173480_108174092_108174189_108187967_108188042_108240596
ES.8393.8	chr12	-	5691	4	ISM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	61248	0	60956	0	3prime_fragment	FALSE	canonical	3	67	junction_3	8.2192186706253	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGTGTGTAGTGCT	NA	False	NA	-7	True	AATAAA	-19	NA	108180436	108169860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773
ES.8393.9	chr12	-	5112	3	ISM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	65412	0	65120	0	3prime_fragment	FALSE	canonical	3	75	junction_2	6	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGTGTGTAGTGCT	3016	False	NA	-7	True	AATAAA	-19	NA	108176272	108169860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_108172694_108173380_108173480_108174092
ES.8394.1	chr12	-	177	1	Intergenic	novelGene_6934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	108250121	108249944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108249900_108250100
ES.8395.1	chr12	+	5986	8	NNC	ENSMUSG00000021260.9	novel	5174	9	NA	NA	-270	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	0.728431359084683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	108272258	108297126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108272943_108277946_108278594_108282709_108282854_108284712_108285712_108286214_108286361_108288060_108288144_108293384_108293468_108293926
ES.8395.2	chr12	+	5189	9	FSM	ENSMUSG00000021260.9	ENSMUST00000021685.8	5174	9	-17	2	-17	-2	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	108272511	108297126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108272943_108277946_108278594_108282709_108282854_108284712_108285042_108285584_108285712_108286214_108286361_108288061_108288144_108293384_108293468_108293926
ES.8395.3	chr12	+	189	1	Antisense	novelGene_ENSMUSG00000097847.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCCAGAGGGTCA	NA	False	NA	NA	False	NA	NA	NA	108280328	108280517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_108280300_108280500
ES.8396.1	chr12	-	168	1	Intergenic	novelGene_6935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAACAAAAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	108291512	108291344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108291300_108291500
ES.8397.1	chr12	+	2250	15	FSM	ENSMUSG00000021259.6	ENSMUST00000021684.6	2118	15	-133	1	-133	-1	multi-exon	FALSE	canonical	1	1	junction_1	1.28769688409428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTACGGCCACCCAG	NA	False	NA	NA	False	NA	NA	NA	108300506	108328492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108300824_108308581_108308663_108309272_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ES.8397.2	chr12	+	2591	14	NIC	ENSMUSG00000021259.6	novel	2118	15	NA	NA	-33	-1	intron_retention	FALSE	canonical	1	1	junction_1	1.27794213275663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTACGGCCACCCAG	NA	False	NA	NA	False	NA	NA	NA	108300606	108328492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108300824_108308581_108308663_108309272_108309355_108311832_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ES.8398.1	chr12	-	173	1	Intergenic	novelGene_6936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGGGGGGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	108325600	108325427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108325400_108325600
ES.8399.1	chr12	-	241	1	Intergenic	novelGene_6937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATCCTGTAGCCTCCCT	NA	False	NA	NA	False	NA	NA	NA	108364946	108364705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108364700_108364900
ES.84.1	chr1	-	1486	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGACTGGCCTGAGTC	NA	False	NA	0	True	AGTAAA	-41	NA	10108388	10094824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
ES.84.10	chr1	-	2879	7	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-6	16	intron_retention	FALSE	canonical	3	86	junction_6	341.904185733697	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	-9	True	AATAAA	-18	NA	10108380	10095051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10095289_10097327_10097477_10100823_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
ES.84.11	chr1	-	3774	7	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	201	229	12	13	intron_retention	FALSE	canonical	3	939	junction_3	42.5976003497328	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTCTGTGGTTTTGT	NA	False	NA	-12	True	AATAAA	-15	NA	10108151	10095054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
ES.84.12	chr1	-	5786	5	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	1	13	intron_retention	FALSE	canonical	3	713	junction_4	114.823778025285	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCCTTCTGTGGTTTTGT	NA	False	NA	-12	True	AATAAA	-15	NA	10108169	10095054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10097477_10100823_10103549_10104232_10104362_10105153_10105389_10107894
ES.84.2	chr1	-	1521	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	176	1	-6	-1	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCTGACTGGCCTGAG	NA	False	NA	-2	True	AGTAAA	-39	NA	10108176	10094826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ES.84.3	chr1	-	4021	7	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	182	1	0	-1	intron_retention	FALSE	canonical	3	939	junction_3	42.5976003497328	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCTGACTGGCCTGAG	NA	False	NA	-2	True	AGTAAA	-39	NA	10108170	10094826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
ES.84.4	chr1	-	1510	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	-36	224	5	18	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTTTTGTAGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	10108388	10095049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ES.84.5	chr1	-	5802	6	ISM	ENSMUSG00000025917.10	ENSMUST00000186528.7	962	7	31	-2373	28	18	intron_retention	FALSE	canonical	3	939	junction_2	26.3104541960035	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTTTTGTAGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	10108135	10095049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153
ES.84.6	chr1	-	3337	7	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-6	18	intron_retention	FALSE	canonical	3	713	junction_6	99.6839449905996	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGGTTTTGTAGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	10108176	10095049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ES.84.7	chr1	-	1240	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	5	16	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	-9	True	AATAAA	-18	NA	10108369	10095051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
ES.84.8	chr1	-	4938	6	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	12	16	intron_retention	FALSE	canonical	3	713	junction_5	109.095554446549	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	-9	True	AATAAA	-18	NA	10108151	10095051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10097477_10100823_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ES.84.9	chr1	-	1304	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	-6	16	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	313.343653036022	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGTTTTGTAGT	NA	False	NA	-9	True	AATAAA	-18	NA	10108176	10095051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
ES.840.1	chr1	+	1435	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	-9	-2	-9	2	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCCTTTCTTTATTG	NA	False	NA	15	True	AATAAA	-17	NA	79753725	79759164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ES.840.2	chr1	+	888	4	NNC	ENSMUSG00000026248.10	novel	1424	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	148.261780495027	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCTTTCCTTTCTT	NA	False	NA	10	True	AATAAA	-12	NA	79753832	79759159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_79754029_79755574_79755609_79757204_79757384_79758680
ES.840.3	chr1	+	873	2	FSM	ENSMUSG00000026248.10	ENSMUST00000189176.2	885	2	15	-3	15	3	multi-exon	FALSE	canonical	3	318	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGGTTTACGTTATTC	NA	False	NA	NA	False	AATAAA	-16	NA	79753847	79756266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_79754029_79755574
ES.8400.1	chr12	+	3958	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	249	-47	-13	-6	multi-exon	TRUE	canonical	1	1	junction_11	3.09120616516523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGATGGGGTCCACA	NA	False	NA	NA	False	ATTAAA	-7	NA	108389323	108505870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ES.8400.2	chr12	+	2730	17	NNC	ENSMUSG00000058070.15	novel	2493	21	NA	NA	29	-6297	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	3.47254859577228	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGATCTAGAGGCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	108389365	108497389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479324_108480632_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562
ES.8400.3	chr12	+	3613	21	NNC	ENSMUSG00000058070.15	novel	4169	19	NA	NA	-5884	-3	intron_retention	FALSE	non_canonical	0	0	junction_1	3.57211421989835	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTCTTATTGACCTAC	9080	False	NA	NA	False	AATAAA	-11	NA	108432227	108505820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108432315_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480638_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ES.8401.1	chr12	-	175	1	Intergenic	novelGene_6938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTAAATAAATA	NA	False	NA	-7	True	NA	NA	NA	108444840	108444665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108444700_108444800
ES.8402.1	chr12	+	2225	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	-47	2	-43	1	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGGCTCTGGCTCACT	NA	False	NA	15	True	AATAAA	-15	NA	108520935	108654773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ES.8402.11	chr12	+	4761	13	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	245	0	intron_retention	FALSE	canonical	1	7	junction_1	65.160059341082	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108521227	108654775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108652376_108652666_108652725_108654287
ES.8402.13	chr12	+	170	1	Intergenic	novelGene_6940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAACAAC	7027	False	NA	NA	False	NA	NA	NA	108561992	108562162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108562000_108562200
ES.8402.14	chr12	+	1773	12	NIC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	12560	-2	intron_retention	FALSE	canonical	3	149	junction_5	18.8990357880768	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAACTCAGGCTCTGGCTC	7630	False	NA	12	True	AATAAA	-12	NA	108614571	108654770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649670_108652308_108652376_108652666_108652725_108654287
ES.8402.15	chr12	+	1698	1	Intergenic	novelGene_6942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAGGAGGA	NA	False	NA	NA	False	AAAACA	-40	NA	108620267	108621965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108620300_108622000
ES.8402.16	chr12	+	3648	2	Genic_Genomic	ENSMUSG00000021262.16	novel	2121	13	NA	NA	-5726	-12370	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	390	False	NA	NA	False	NA	NA	NA	108636635	108640464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_108638552_108638732
ES.8402.17	chr12	+	2376	2	Genic_Genomic	ENSMUSG00000021262.16	novel	2121	13	NA	NA	-4427	-12343	multi-exon	FALSE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAGAAGAAAG	1689	False	NA	NA	False	NA	NA	NA	108637934	108640491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_108638549_108638729
ES.8402.18	chr12	+	2774	1	NIC	ENSMUSG00000021262.16	novel	2121	13	NA	NA	-2338	-10037	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAACTGAGAGACAAACA	3778	False	NA	NA	False	ATTAAA	-14	NA	108640023	108642797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108640000_108642800
ES.8402.3	chr12	+	2323	15	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	61.4242938710004	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108520937	108654772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ES.8402.5	chr12	+	2540	13	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	-10	-1922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.2106611089149	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGATCTCCAGTGTT	NA	False	NA	NA	False	AAAAAG	-27	NA	108520968	108650912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108650054
ES.8402.6	chr12	+	2129	13	FSM	ENSMUSG00000021262.16	ENSMUST00000077735.13	2121	13	-10	2	-10	1	multi-exon	FALSE	canonical	3	17	junction_10	48.559814204294	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGGCTCTGGCTCACT	NA	False	NA	15	True	AATAAA	-15	NA	108520968	108654773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108652308_108652376_108652666_108652725_108654287
ES.8402.7	chr12	+	6231	11	NIC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	234	0	intron_retention	FALSE	canonical	3	149	junction_6	18.8891503249882	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108521216	108654772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108652376_108652666
ES.8402.9	chr12	+	1927	14	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4589512975056	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	False	NA	14	True	AATAAA	-14	NA	108521225	108654772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108521473_108614580_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ES.8403.1	chr12	-	177	1	Intergenic	novelGene_6939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	108541709	108541532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108541500_108541700
ES.8404.1	chr12	-	230	1	Intergenic	novelGene_6941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTCAAGCAAACAGCCA	NA	False	NA	NA	False	NA	NA	NA	108577180	108576950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108577000_108577200
ES.8405.1	chr12	-	1359	3	Intergenic	novelGene_6943	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTGTTTCTGCTT	1574	False	NA	NA	False	NA	NA	NA	108700752	108688651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108689673_108690949_108691132_108700596
ES.8405.2	chr12	-	2118	1	Intergenic	novelGene_6944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAAGCTGCCTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	108690779	108688661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108688700_108690800
ES.8406.1	chr12	+	214	1	Intergenic	novelGene_6946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAAAGAATTTTA	8785	False	NA	NA	False	NA	NA	NA	108722561	108722775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108722600_108722800
ES.8407.1	chr12	-	1886	1	Intergenic	novelGene_6945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACCCCAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	108723225	108721339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108721300_108723200
ES.8408.1	chr12	-	178	1	Intergenic	novelGene_6947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	108731147	108730969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108731000_108731100
ES.8409.1	chr12	-	179	1	Intergenic	novelGene_6948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	108740208	108740029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108740000_108740200
ES.841.1	chr1	-	149	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCGGCCTGAGCAAGGC	6295	False	NA	NA	False	NA	NA	NA	79756652	79756503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_79756500_79756700
ES.8410.1	chr12	+	2669	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	-8	3517	-8	1067	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACTCAGTGACAGT	NA	False	NA	14	True	AATAAA	-19	NA	108758890	108782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.10	chr12	+	2324	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	482	1067	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.259092849934	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACTCAGTGACAGT	NA	False	NA	14	True	AATAAA	-19	NA	108759380	108782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108760018_108772404_108772568_108778844_108778906_108779756_108779902_108780531_108780691_108781398
ES.8410.11	chr12	+	3735	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	536	1907	536	-1907	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAAAACTCCAGAGGA	NA	False	NA	NA	False	AATAAA	-21	NA	108759434	108784167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.12	chr12	+	2749	5	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	563	943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.7823918632177	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGATTACGGCAGAA	NA	False	NA	4	True	AATAAA	-12	NA	108759461	108782433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108760018_108772404_108772568_108778844_108778906_108779756_108780691_108781398
ES.8410.13	chr12	+	7712	7	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	639	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.9082947617771	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTGTTCTTGTTTG	NA	False	NA	23	True	AATAAA	-23	NA	108759537	108786072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108760018_108772404_108772568_108774101_108776132_108778844_108778906_108779756_108779902_108780531_108780691_108781398
ES.8410.14	chr12	+	1881	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	920	1074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.494532934816	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTGACAGTGACTGTG	NA	False	NA	21	True	AATAAA	-26	NA	108759818	108782564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108760018_108772404_108772568_108778844_108778906_108779961_108780095_108780531_108780691_108781398
ES.8410.15	chr12	+	1795	4	FSM	ENSMUSG00000021264.13	ENSMUST00000126912.2	715	4	-137	-943	-137	943	multi-exon	FALSE	canonical	3	69	junction_1	9.93310961716756	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGATTACGGCAGAA	6059	False	NA	4	True	AATAAA	-12	NA	108772027	108782433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.16	chr12	+	7264	3	ISM	ENSMUSG00000021264.13	ENSMUST00000126912.2	715	4	540	-812	540	812	3prime_fragment	FALSE	canonical	3	71	junction_1	10	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTCAGTGTAATTTCT	6736	False	NA	NA	False	NA	NA	NA	108772704	108782302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_108778906_108780531_108780691_108781398
ES.8410.17	chr12	+	8314	1	NIC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	2078	1066	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGCACTCAGTGACAG	8274	False	NA	13	True	AATAAA	-18	NA	108774242	108782556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108774200_108782600
ES.8410.18	chr12	+	4232	2	NIC	ENSMUSG00000021264.13	novel	715	4	NA	NA	5350	964	intron_retention	FALSE	canonical	3	91	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTGTAAGCACAGCCT	NA	False	NA	25	True	AATAAA	-33	NA	108777514	108782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108780691_108781398
ES.8410.19	chr12	+	1920	2	ISM	ENSMUSG00000021264.13	ENSMUST00000126912.2	715	4	7765	-1067	7765	1067	3prime_fragment	FALSE	canonical	3	91	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACTCAGTGACAGT	NA	False	NA	14	True	AATAAA	-19	NA	108779929	108782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_108780691_108781398
ES.8410.2	chr12	+	1886	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	-5	1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8454210540236	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACTCAGTGACAGT	NA	False	NA	14	True	AATAAA	-19	NA	108758893	108782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108759045_108759824_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.3	chr12	+	2216	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	-4	1067	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8454210540236	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGCACTCAGTGACAGT	NA	False	NA	14	True	AATAAA	-19	NA	108758894	108782557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108758923_108759371_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.4	chr12	+	2412	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	-2	1646	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8454210540236	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACCTAACTGTCTGTC	NA	False	NA	21	True	TATAAA	-36	NA	108758896	108783136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108759031_108759860_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.5	chr12	+	6031	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8454210540236	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTCTTGTTTGTT	NA	False	NA	25	True	AATAAA	-25	NA	108758908	108786074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108759054_108759190_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.6	chr12	+	2206	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	13	965	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8454210540236	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGTAAGCACAGCCTT	NA	False	NA	26	True	AATAAA	-34	NA	108758911	108782455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108758990_108759329_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.7	chr12	+	1809	6	NNC	ENSMUSG00000021264.13	novel	6178	5	NA	NA	39	961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30.8454210540236	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTCTGTAAGCACAG	NA	False	NA	22	True	AATAAA	-30	NA	108758937	108782451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108758994_108759700_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.8	chr12	+	2100	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	308	3770	308	814	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGTGTAATTTCTTT	NA	False	NA	NA	False	NA	NA	NA	108759206	108782304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8410.9	chr12	+	2231	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	322	3625	322	959	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAGCTCTGTAAGCAC	NA	False	NA	20	True	AATAAA	-28	NA	108759220	108782449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ES.8411.1	chr12	+	2585	1	Intergenic	novelGene_6950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTTAATAAAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	108806811	108809396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_108806800_108809400
ES.8412.1	chr12	+	1579	6	FSM	ENSMUSG00000048856.10	ENSMUST00000057026.10	1580	6	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	0.748331477354788	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTCGCTCTGTGCTC	NA	False	NA	NA	False	AATAAA	-18	NA	108817054	108822740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_108817134_108819274_108819319_108819628_108819701_108820141_108820325_108821219_108821545_108821864
ES.8413.1	chr12	+	4671	1	Antisense	novelGene_ENSMUSG00000021266.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGACCCAGGAACATACTA	NA	False	NA	NA	False	NA	NA	NA	108850583	108855254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_108850600_108855300
ES.8414.1	chr12	-	1518	3	Genic_Genomic	ENSMUSG00000114045.2	novel	2709	1	NA	NA	48	12044	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTAGTAGTCTGTCAT	7371	False	NA	NA	False	NA	NA	NA	108758621	108743916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_108745214_108746546_108746642_108758495
ES.8414.11	chr12	-	8042	4	NNC	ENSMUSG00000021266.17	novel	2764	10	NA	NA	2715	1	intron_retention	TRUE	non_canonical	0	0	junction_3	911.029576297547	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCACTGTCTGACCAA	NA	False	NA	-34	True	AATAAA	-16	NA	108838492	108825958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108837885_108837931
ES.8414.12	chr12	-	4340	6	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-484	1	intron_retention	FALSE	canonical	3	246	junction_1	695.614145917117	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCACTGTCTGACCAA	NA	False	NA	-34	True	AATAAA	-16	NA	108841691	108825958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108826260_108827194_108827353_108828728_108832226_108833602_108833704_108841039_108841223_108841591
ES.8414.14	chr12	-	4965	10	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_2	621.039530759059	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860040	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108829740_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.15	chr12	-	5869	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1835	junction_8	116.005118421559	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860073	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.16	chr12	-	3521	5	NNC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	4646	0	intron_retention	FALSE	canonical	0	0	junction_4	832.10726472012	1327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108836561	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108834962
ES.8414.17	chr12	-	4164	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	1835	junction_8	115.104775639415	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860060	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.19	chr12	-	3137	11	NNC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	13	0	intron_retention	FALSE	canonical	0	0	junction_4	770.024681422615	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860087	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108834962_108835286_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.2	chr12	-	1785	12	Fusion	ENSMUSG00000114045.2_ENSMUSG00000021266.17	novel	2878	11	NA	NA	2	-1193	multi-exon	FALSE	non_canonical	0	0	junction_1	755.807739337839	1365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTTGTTTTCCTCCCAC	NA	False	NA	NA	False	NA	NA	NA	108860061	108757153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_-_108757186_108769811_108769944_108827126_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.20	chr12	-	1820	11	NNC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	738.754417922492	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860084	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108860050
ES.8414.21	chr12	-	2611	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	6	0	intron_retention	FALSE	canonical	0	0	junction_8	645.452058153818	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860057	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108859994
ES.8414.22	chr12	-	2864	10	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-10	0	intron_retention	FALSE	canonical	0	0	junction_8	610.215525576268	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860073	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854237_108854475_108859994
ES.8414.23	chr12	-	2680	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_6	658.287634226103	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860062	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108848620_108848835_108854301_108854475_108859994
ES.8414.25	chr12	-	9132	1	FSM	ENSMUSG00000088217.4	ENSMUST00000157592.4	106	1	-6496	-2530	-6496	2530	mono-exon	FALSE	NA	NA	NA	NA	NA	1327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	778	False	NA	-35	True	AATAAA	-15	NA	108835091	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108826000_108835100
ES.8414.26	chr12	-	2561	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	15	0	intron_retention	FALSE	canonical	1	2	junction_7	642.97296550866	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860048	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108854301_108854475_108859994
ES.8414.27	chr12	-	2678	10	NNC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	621.039530759059	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860063	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828758_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.3	chr12	-	1740	1	FSM	ENSMUSG00000114045.2	ENSMUST00000223001.2	2709	1	-1462	2431	-1462	-2431	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCCTGTGCTTGATTTT	5861	False	NA	-1	True	AATAAA	-16	NA	108760131	108758391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108758400_108760100
ES.8414.30	chr12	-	4176	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1835	junction_8	116.263641672709	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860073	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.31	chr12	-	4052	11	NNC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	738.299911959903	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860062	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108826260_108827194_108827353_108828728_108828870_108829740_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.33	chr12	-	2228	8	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	1	0	intron_retention	FALSE	non_canonical	0	0	junction_3	679.849323042111	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860062	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832050_108841692_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.34	chr12	-	5882	9	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_7	840.318243286435	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860062	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108832226_108833602_108833704_108841039_108841183_108841591_108841712_108846968_108847078_108848620_108848835_108854237_108854475_108859994
ES.8414.35	chr12	-	2806	10	NNC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	619.961189545934	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860063	108825959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827369_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.36	chr12	-	3778	4	ISM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	23564	5	5647	-1	3prime_fragment	FALSE	canonical	3	1899	junction_3	17.9691092959247	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCACTGTCTGACC	309	False	NA	-36	True	AATAAA	-14	NA	108835560	108825960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602
ES.8414.37	chr12	-	2823	10	NNC	ENSMUSG00000021266.17	novel	2764	10	NA	NA	-258	-1	intron_retention	FALSE	canonical	0	0	junction_9	623.285520051744	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCACTGTCTGACC	NA	False	NA	-36	True	AATAAA	-14	NA	108859382	108825960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859279
ES.8414.39	chr12	-	2176	9	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	653.810358112351	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGTCACTGTCTGAC	NA	False	NA	-37	True	AATAAA	-13	NA	108860050	108825961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827083_108832126_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.4	chr12	-	178	1	Intergenic	novelGene_6949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	108806660	108806482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108806500_108806700
ES.8414.40	chr12	-	2678	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-10	-2	intron_retention	FALSE	canonical	1	1	junction_5	658.624086638198	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGTCACTGTCTGAC	NA	False	NA	-37	True	AATAAA	-13	NA	108860073	108825961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.41	chr12	-	1832	11	NNC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	592.004763494349	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGTCACTGTCTGAC	NA	False	NA	-37	True	AATAAA	-13	NA	108860063	108825961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108826260_108827215_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.43	chr12	-	2301	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	26	504	-11	-500	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGGACCAGGCTGGGTC	NA	False	NA	NA	False	NA	NA	NA	108860074	108826459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.44	chr12	-	2059	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	29	743	-8	-739	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAGACATGTAGTGGG	NA	False	NA	NA	False	NA	NA	NA	108860071	108826698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.45	chr12	-	1910	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	37	884	0	-880	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTGCACTGTATCATC	NA	False	NA	NA	False	TTTAAA	-24	NA	108860063	108826839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.47	chr12	-	1717	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	13	1101	13	-1097	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTCCCCGTCTGTTG	NA	False	NA	46	True	NA	NA	NA	108860087	108827056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.5	chr12	-	2837	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	6	-12	6	12	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGCAGGCCACAGAGGA	NA	False	NA	-19	True	AATAAA	-31	NA	108860094	108825943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.50	chr12	-	1596	10	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	13	-1162	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	618.946416636098	1330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACGTGGTAATTCCTGGA	NA	False	NA	-19	True	NA	NA	NA	108860087	108827121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108860050
ES.8414.52	chr12	-	3569	11	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-7	-1171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	784.789277449686	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCTTCTCACGTGGTA	NA	False	NA	-28	True	NA	NA	NA	108860070	108827130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108829740_108831684_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.53	chr12	-	1620	10	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-10	-1171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	607.288326177205	1329	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGCTTCTCACGTGGTA	NA	False	NA	-28	True	NA	NA	NA	108860073	108827130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841048_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.54	chr12	-	1274	8	NNC	ENSMUSG00000021266.17	novel	896	6	NA	NA	0	3253	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	868.363273929871	1274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATTTCTTCTTTTTGTG	NA	False	NA	NA	False	AAAACA	-17	NA	108860063	108837786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108837885_108837931_108838240_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.55	chr12	-	2402	5	NIC	ENSMUSG00000021266.17	novel	2878	11	NA	NA	0	1165	intron_retention	FALSE	canonical	3	1835	junction_4	114.832486692573	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATTTTATTATTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	108860063	108839874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.56	chr12	-	900	5	ISM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	30	15428	-7	-344	5prime_fragment	FALSE	canonical	3	1835	junction_4	114.832486692573	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCTCCTTGTCCTTG	NA	False	NA	NA	False	ACTAAA	-15	NA	108860070	108841383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.57	chr12	-	151	1	Intergenic	novelGene_6951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	108859375	108859224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108859200_108859400
ES.8414.6	chr12	-	1898	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860102	108825955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.7	chr12	-	2620	9	NIC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	-9	0	intron_retention	FALSE	canonical	1	2	junction_4	640.527858488606	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860072	108825955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ES.8414.8	chr12	-	3100	10	FSM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	-336	0	-336	0	multi-exon	FALSE	canonical	3	10	junction_9	620.186073232944	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108859460	108825955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ES.8414.9	chr12	-	2772	10	NNC	ENSMUSG00000021266.17	novel	2831	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	14	junction_9	618.946416636098	1342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTGTCTGACCAAG	NA	False	NA	-33	True	AATAAA	-17	NA	108860099	108825957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108860050
ES.8415.1	chr12	+	2028	8	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	-30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4726865179776	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4820	False	NA	NA	False	NA	NA	NA	108860167	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108863834_108863933_108946370_108946426_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.10	chr12	+	1866	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.0956277738693	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4875	False	NA	NA	False	NA	NA	NA	108860222	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860257_108863834_108863933_108946616_108946765_108958732_108958864_108990945_108991060_108992335_108992477_108993171
ES.8415.12	chr12	+	2441	8	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	26.5837145175579	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4878	False	NA	NA	False	NA	NA	NA	108860225	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108863834_108863967_108864159_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.13	chr12	+	2502	6	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.6148611342346	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4879	False	NA	NA	False	NA	NA	NA	108860226	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108863834_108864652_108946616_108946765_108990888_108991060_108992335_108992477_108993171
ES.8415.14	chr12	+	4184	7	NIC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	5	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	23.6713610367747	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCGTGGTCATGGTGT	4900	False	NA	NA	False	NA	NA	NA	108860247	108994379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108861816_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.15	chr12	+	1720	5	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40962	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.0983383268707	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108945765	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108945826_108946616_108946765_108990888_108991060_108992335_108992477_108993171
ES.8415.16	chr12	+	1881	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40584	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.0596049901365	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108946143	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108946179_108946370_108946426_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.17	chr12	+	931	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40583	-15747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	17.7427606520393	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAACAGTAA	NA	False	NA	NA	False	NA	NA	NA	108946144	108978627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108946245_108946370_108946426_108946616_108946765_108958732_108958864_108976605_108976754_108977156_108977281_108978402
ES.8415.18	chr12	+	1938	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40575	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.5894716006167	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108946152	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108946245_108946370_108946426_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.19	chr12	+	1895	5	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40557	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.252212302756	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108946170	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108946376_108946616_108946765_108990888_108991060_108992305_108992477_108993171
ES.8415.2	chr12	+	2720	7	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.9251908665555	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4829	False	NA	NA	False	NA	NA	NA	108860176	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108862817_108862986_108863834_108864652_108946616_108946765_108990888_108991060_108992335_108992477_108993171
ES.8415.20	chr12	+	1939	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-40555	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.0596049901365	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108946172	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108946266_108946370_108946426_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.21	chr12	+	1590	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-17632	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.6262900483478	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108969095	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108969174_108990888_108991060_108992335_108992477_108993171
ES.8415.22	chr12	+	1975	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-17575	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5678778348646	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCGTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	108969152	108994377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108969610_108990888_108991060_108992335_108992477_108993171
ES.8415.23	chr12	+	1588	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-6194	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5678778348646	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	NA	False	NA	NA	False	NA	NA	NA	108980533	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108980610_108990888_108991060_108992335_108992477_108993171
ES.8415.3	chr12	+	2691	7	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.6713610367747	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGCCGTGGTCATGGT	4829	False	NA	NA	False	NA	NA	NA	108860176	108994377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860254_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.4	chr12	+	2574	6	NNC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	-19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.6521055982612	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTGCCGTGGTCATG	4831	False	NA	NA	False	NA	NA	NA	108860178	108994375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108862817_108862986_108863834_108864652_108990888_108991060_108992335_108992477_108993171
ES.8415.6	chr12	+	1773	6	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.8998381872786	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4862	False	NA	NA	False	NA	NA	NA	108860209	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860242_108863834_108863933_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8415.7	chr12	+	1800	6	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.0961056827772	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4862	False	NA	NA	False	NA	NA	NA	108860209	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860252_108863834_108863933_108946616_108946765_108990888_108991060_108992335_108992477_108993171
ES.8415.8	chr12	+	1740	6	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	30.8519043172379	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4870	False	NA	NA	False	NA	NA	NA	108860217	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_108860257_108863834_108863933_108946616_108946765_108990945_108991060_108992335_108992477_108993171
ES.8415.9	chr12	+	1928	7	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	24.7638849940796	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAGACTTGCCGTGGT	4870	False	NA	NA	False	NA	NA	NA	108860217	108994371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_108860257_108863834_108863933_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
ES.8416.1	chr12	-	7244	1	Intergenic	novelGene_6952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACTTTTAATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108943645	108936401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_108936400_108943600
ES.8417.1	chr12	-	3687	6	NIC	ENSMUSG00000040867.14	novel	2707	7	NA	NA	1	5	intron_retention	FALSE	canonical	3	8	junction_3	1.6	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTTTGCATTGTTTC	NA	False	NA	-1	True	AATAAA	-18	NA	109034142	108998107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
ES.8417.2	chr12	-	2162	6	NNC	ENSMUSG00000040867.14	novel	3272	7	NA	NA	-1926	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.63033476111609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGGTTTGCATTGTTT	9324	False	NA	-2	True	AATAAA	-17	NA	109004939	108998108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_108998286_108998713_109000278_109001253_109001338_109002921_109003030_109003578_109003646_109004777
ES.8417.3	chr12	-	2819	7	FSM	ENSMUSG00000040867.14	ENSMUST00000190647.3	2707	7	-109	-3	-109	3	multi-exon	FALSE	canonical	2	2	junction_1	3.3870669054836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGTTTGCATTGTT	NA	False	NA	-3	True	AATAAA	-16	NA	109034252	108998109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_109000278_109001253_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
ES.8417.4	chr12	-	4009	6	NIC	ENSMUSG00000040867.14	novel	2707	7	NA	NA	-91	2	intron_retention	FALSE	canonical	0	0	junction_5	4.45421149026402	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCAGGTTTGCATTGT	NA	False	NA	-4	True	AATAAA	-15	NA	109019598	108998110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109019182
ES.8417.5	chr12	-	3524	4	NNC	ENSMUSG00000040867.14	novel	3272	7	NA	NA	-895	0	intron_retention	FALSE	canonical	0	0	junction_3	5.24933858267454	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCCCAGGTTTGCATT	NA	False	NA	-6	True	AATAAA	-13	NA	109003908	108998112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109001338_109002921_109003030_109003578_109003646_109003784
ES.8418.1	chr12	+	1763	6	FSM	ENSMUSG00000040856.18	ENSMUST00000056110.15	4653	6	178	2712	178	6	multi-exon	FALSE	canonical	2	2	junction_1	11.0995495404093	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAAGAAATAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	109418952	109426550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109419221_109419512_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
ES.8418.2	chr12	+	1649	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	-27	81	-27	1	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAGTTAAAGAAATAAG	NA	False	NA	NA	False	NA	NA	NA	109419353	109426545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
ES.8418.3	chr12	+	2892	4	FSM	ENSMUSG00000040856.18	ENSMUST00000124293.3	1283	4	-747	-862	-7	6	multi-exon	FALSE	canonical	3	24	junction_3	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAAAGAAATAAGTATGT	NA	False	NA	NA	False	NA	NA	NA	109419373	109426550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109420975_109421418_109421550_109423999_109424142_109425532
ES.8419.1	chr12	+	178	1	Intergenic	novelGene_6953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	780	False	NA	NA	False	NA	NA	NA	109458866	109459044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_109458900_109459000
ES.842.1	chr1	-	2036	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	60	114	-1	-114	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCATTTGCTGTCAAGC	NA	False	NA	5	True	AATAAA	-24	NA	79836353	79772027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ES.842.2	chr1	-	1786	8	NIC	ENSMUSG00000026249.11	novel	2210	9	NA	NA	3	-132	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	19.9407284987591	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAACGTCTCGCTGGA	NA	False	NA	-13	True	AATAAA	-6	NA	79836349	79772045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79798993_79799275_79836227
ES.842.3	chr1	-	1769	8	NIC	ENSMUSG00000026249.11	novel	2210	9	NA	NA	28	-132	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	19.9989795658046	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAACGTCTCGCTGGA	NA	False	NA	-13	True	AATAAA	-6	NA	79836385	79772045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79836227
ES.842.4	chr1	-	2267	3	FSM	ENSMUSG00000026249.11	ENSMUST00000153862.2	2315	3	62	-14	1	14	multi-exon	FALSE	canonical	3	50	junction_1	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGGCTGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-37	NA	79836351	79792810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_79794673_79798993_79799275_79836227
ES.8420.1	chr12	-	4231	6	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	-9130	-8606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.78567765543682	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109491796	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109470114_109472761_109474112_109480759_109480854_109482537_109482667_109488933_109489482_109491739
ES.8420.2	chr12	-	2188	8	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	-7412	-8606	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	2.55550625999976	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109490078	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109469347_109470008_109470114_109472761_109472866_109480759_109480854_109482537_109482667_109488933_109489091_109489222_109489482_109490024
ES.8420.3	chr12	-	1885	9	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	-9135	-8606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	2.73575857852991	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109491801	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109468782_109469092_109469347_109470008_109470114_109472761_109472866_109480759_109480854_109482537_109482667_109488933_109489091_109489222_109489482_109491739
ES.8420.4	chr12	-	2572	11	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	-8797	-8606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.89827534923789	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109491463	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109468782_109469092_109469347_109470008_109470114_109472761_109472866_109473908_109474112_109480759_109480854_109482537_109482667_109488933_109489091_109489222_109489482_109490215_109490295_109490996
ES.8420.5	chr12	-	1034	3	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	7380	-8606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109475286	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109468782_109472761_109472866_109475077
ES.8420.6	chr12	-	7234	4	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	3751	-8606	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.05480466765633	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGTGAAGAATGCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109478915	109468060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109468782_109469092_109469347_109470008_109470114_109472761
ES.8420.7	chr12	-	2816	8	NNC	ENSMUSG00000112977.2	novel	690	5	NA	NA	-9036	-8608	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_7	2.66496544373966	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCAGTGAAGAATGCT	NA	False	NA	NA	False	ATTAAA	-14	NA	109491702	109468062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_109468782_109469092_109469347_109470008_109470114_109472761_109473023_109480759_109480854_109482537_109482667_109488933_109489482_109490996
ES.8421.1	chr12	+	1773	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-4	2	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506879	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.10	chr12	+	2027	9	NNC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	178.105963895093	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506881	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512069_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.11	chr12	+	1685	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.12	chr12	+	1720	10	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	141.338836370853	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	109506881	109538153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506897_109506938_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.13	chr12	+	1815	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506881	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.14	chr12	+	2000	10	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	168.974320497685	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506881	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515634_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.15	chr12	+	2014	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	145.37231295883	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506881	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512069_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.16	chr12	+	1734	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109506881	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.17	chr12	+	1779	9	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	166.96140085361	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.18	chr12	+	1805	9	NNC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	182.37834129907	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTGATGGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	109506881	109538156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109516015_109516087_109516246_109524670_109524755_109537824
ES.8421.19	chr12	+	1739	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	168.942690439868	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109537824
ES.8421.2	chr12	+	1521	3	FSM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	-3	-20	-3	20	multi-exon	FALSE	canonical	3	187	junction_2	159.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAATAAAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109506880	109511222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109506983_109509582_109509689_109509909
ES.8421.20	chr12	+	847	3	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	27650	-2	315	5prime_fragment	FALSE	canonical	3	281	junction_2	112.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGTTTGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	109506881	109510505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109506983_109509582_109509733_109509909
ES.8421.21	chr12	+	1972	8	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	169.794353407231	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512069_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.22	chr12	+	2065	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	intron_retention	FALSE	canonical	3	75	junction_3	129.062969127477	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.23	chr12	+	1817	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	181.086262248134	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCAGTGATGGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	109506881	109538156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109515725_109515807_109515913_109516015_109516087_109516246_109524670_109524755_109537824
ES.8421.24	chr12	+	1901	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	141.848015054847	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515634_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.25	chr12	+	1739	2	ISM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	0	-20	0	20	intron_retention	FALSE	canonical	3	506	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAATAAAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109506883	109511222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109506983_109509582
ES.8421.26	chr12	+	1702	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	175.206001201851	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	109506885	109538153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.27	chr12	+	1622	8	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	179.148553110631	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506885	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509662_109509909_109510626_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.28	chr12	+	1789	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	146.861116365088	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506885	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109516015_109516087_109516246_109524670_109524755_109537824
ES.8421.29	chr12	+	2047	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	138.267799487082	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCAGTGATGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	109506885	109538155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512069_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.3	chr12	+	1683	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-3	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	139.261023452584	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506880	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109537824
ES.8421.30	chr12	+	1721	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-1	1	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	134.510146798807	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506886	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109537824
ES.8421.31	chr12	+	1760	10	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	65	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	169.387640751934	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506954	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509662_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.32	chr12	+	1750	9	Fusion	ENSMUSG00002074892.1_ENSMUSG00000021268.18	novel	755	6	NA	NA	-421	1	multi-exon	FALSE	canonical	0	0	junction_1	124.764528212149	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109507484	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109507539_109509595_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.33	chr12	+	5557	6	ISM	ENSMUSG00000021268.18	ENSMUST00000143272.8	5971	7	2216	-1581	-259	1581	3prime_fragment	FALSE	canonical	0	0	junction_5	156.019742340513	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCAC	NA	False	NA	NA	False	NA	NA	NA	109510121	109529697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109525073
ES.8421.34	chr12	+	1488	8	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-63	1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	153.11100415005	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109510317	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109510626_109510830_109510925_109512069_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.35	chr12	+	928	7	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	120	1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	136.594798176537	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109510500	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109510626_109512312_109512426_109515725_109515807_109515953_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.36	chr12	+	1892	6	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	4376	-2	-17	1	3prime_fragment	FALSE	canonical	3	289	junction_1	49.6531972787252	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109511263	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.37	chr12	+	1797	5	FSM	ENSMUSG00000021268.18	ENSMUST00000166636.9	797	5	-996	-4	-3	1	multi-exon	FALSE	canonical	3	88	junction_1	135.706484738203	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109511277	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.38	chr12	+	1833	6	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	147.759805089205	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	109511278	109538153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109512426_109515725_109515807_109515953_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.4	chr12	+	1838	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_6	141.01418368377	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506880	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109516015_109516087_109516246_109524670_109524755_109537824
ES.8421.40	chr12	+	998	6	NNC	ENSMUSG00000021268.18	novel	797	5	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	153.290573748029	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCAGTGATGGGTG	NA	False	NA	NA	False	NA	NA	NA	109512244	109538153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109512426_109515634_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.41	chr12	+	3865	5	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	5706	-5	266	0	3prime_fragment	FALSE	canonical	3	333	junction_1	37.877268908938	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109512593	109538160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.42	chr12	+	1546	3	NIC	ENSMUSG00000021268.18	novel	797	5	NA	NA	-470	2	intron_retention	FALSE	canonical	3	415	junction_1	2	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGGTGTGCTACTAA	NA	False	NA	NA	False	ACTAAA	-3	NA	109515121	109538162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109516246_109524670_109524755_109537824
ES.8421.43	chr12	+	920	4	ISM	ENSMUSG00000021268.18	ENSMUST00000143847.8	706	5	3315	-1	-47	1	3prime_fragment	FALSE	canonical	3	352	junction_1	30.6847772609735	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109515642	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.44	chr12	+	3515	1	FSM	ENSMUSG00000076451.3	ENSMUST00000103252.3	94	1	-1644	-1777	-1644	1777	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTGTTAACAAATTGTA	NA	False	NA	NA	False	NA	NA	NA	109528481	109531996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109528500_109532000
ES.8421.45	chr12	+	6390	1	ISM	ENSMUSG00000021268.18	ENSMUST00000146701.8	14548	5	20487	3	16078	1	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109531767	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109531800_109538200
ES.8421.5	chr12	+	1860	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.6	chr12	+	1545	7	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	198.89947209583	416	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109506983_109509582_109509662_109509909_109510626_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.7	chr12	+	1564	3	ISM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	26933	-2	20	intron_retention	FALSE	canonical	3	281	junction_2	112.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAATAAAGAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109506881	109511222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109506983_109509582_109509733_109509909
ES.8421.8	chr12	+	1904	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	-6	-2	-2	1	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8421.9	chr12	+	1697	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	135.363757848161	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGATGGGTGTGCT	NA	False	NA	NA	False	NA	NA	NA	109506881	109538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ES.8422.1	chr12	-	4333	1	Intergenic	novelGene_6954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACACAGCTGTGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	109524641	109520308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109520300_109524600
ES.8423.1	chr12	-	3938	1	Intergenic	novelGene_6955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACATTTAATTGAACAT	9507	False	NA	NA	False	NA	NA	NA	109551359	109547421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109547400_109551400
ES.8424.1	chr12	+	1051	1	FSM	ENSMUSG00000070072.3	ENSMUST00000093564.3	124	1	88	-1015	88	1015	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCAGAGGGCTCTG	4333	False	NA	NA	False	NA	NA	NA	109558236	109559287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109558200_109559300
ES.8424.10	chr12	+	3031	16	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-70	0	intron_retention	FALSE	canonical	1	1	junction_1	300.271358755524	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2603	False	NA	NA	False	ACTAAA	-5	NA	109593512	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109593588_109604272_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
ES.8424.11	chr12	+	4224	17	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-80	0	intron_retention	FALSE	canonical	2	7	junction_1	301.792768303019	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1215	False	NA	NA	False	ACTAAA	-5	NA	109600497	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109600789_109601827_109601892_109604272_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.12	chr12	+	3850	14	Fusion	ENSMUSG00000097451.12_ENSMUSG00002076155.1	novel	1689	9	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	297.349355225893	614	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1627	False	NA	NA	False	NA	NA	NA	109602448	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109603404_109604272_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.13	chr12	+	3309	13	Fusion	ENSMUSG00000097451.12_ENSMUSG00002076155.1	novel	1689	9	NA	NA	3	-46	intron_retention	FALSE	canonical	0	0	junction_1	313.770218472053	609	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATGTGTTTCTCATGA	1627	False	NA	NA	False	NA	NA	NA	109602448	109627655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109603404_109604272_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ES.8424.14	chr12	+	186	1	FSM	ENSMUSG00002076155.1	ENSMUST00020183598.1	73	1	4	-117	4	117	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGATAAAAAAGATA	1628	False	NA	NA	False	AATAAA	-30	NA	109602449	109602635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109602400_109602600
ES.8424.15	chr12	+	4718	13	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	intron_retention	FALSE	canonical	3	11	junction_1	285.98381607279	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1628	False	NA	NA	False	NA	NA	NA	109602449	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.16	chr12	+	8125	14	NNC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	intron_retention	FALSE	canonical	0	0	junction_2	302.745777703273	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1628	False	NA	NA	False	NA	NA	NA	109602449	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109604361_109608998_109609091_109609850_109609896_109611237_109611337_109611695_109611766_109612280_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.17	chr12	+	4837	16	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	intron_retention	FALSE	canonical	2	8	junction_1	280.358294568456	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1628	False	NA	NA	False	ACTAAA	-5	NA	109602449	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.18	chr12	+	2908	14	Fusion	ENSMUSG00000097451.12_ENSMUSG00002076155.1	novel	1689	9	NA	NA	4	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	303.176516240952	614	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	1628	False	NA	NA	False	NA	NA	NA	109602449	109628142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109603404_109604272_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109612365_109617440_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.19	chr12	+	3932	15	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	285.277523310412	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1628	False	NA	NA	False	ACTAAA	-5	NA	109602449	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.2	chr12	+	6361	1	FSM	ENSMUSG00000070133.3	ENSMUST00000093625.3	94	1	-2292	-3975	-2292	3975	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	4744	False	NA	NA	False	NA	NA	NA	109558647	109565008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109558600_109565000
ES.8424.20	chr12	+	5630	14	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	intron_retention	FALSE	canonical	3	11	junction_1	278.56098946563	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1628	False	NA	NA	False	ACTAAA	-5	NA	109602449	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.21	chr12	+	4779	15	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-824	0	intron_retention	FALSE	canonical	2	8	junction_1	296.958777115819	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1628	False	NA	NA	False	ACTAAA	-5	NA	109602449	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
ES.8424.22	chr12	+	3858	14	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-821	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	287.846236072841	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	1631	False	NA	NA	False	ACTAAA	-5	NA	109602452	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.23	chr12	+	4648	12	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-807	0	intron_retention	FALSE	canonical	0	0	junction_9	310.861080822685	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1645	False	NA	NA	False	NA	NA	NA	109602466	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ES.8424.24	chr12	+	5473	15	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-612	0	intron_retention	FALSE	canonical	2	8	junction_1	290.174727447067	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1840	False	NA	NA	False	NA	NA	NA	109602661	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.25	chr12	+	2997	14	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	311.230427012246	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	270	False	NA	NA	False	NA	NA	NA	109603322	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109616590_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ES.8424.26	chr12	+	3970	12	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-777	0	intron_retention	FALSE	canonical	3	13	junction_3	268.502674009801	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	35	False	NA	NA	False	NA	NA	NA	109607835	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109609087_109609847_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.27	chr12	+	3301	11	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	8	0	intron_retention	FALSE	canonical	3	13	junction_2	243.721747080559	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	397	False	NA	NA	False	ACTAAA	-5	NA	109609272	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109609896_109611695_109611766_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.28	chr12	+	4198	12	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	9	0	intron_retention	FALSE	canonical	3	17	junction_2	233.446261535269	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	398	False	NA	NA	False	NA	NA	NA	109609273	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.29	chr12	+	1045	3	FSM	ENSMUSG00000097451.12	ENSMUST00000238689.2	2364	3	10	1309	10	-79	multi-exon	FALSE	canonical	3	17	junction_2	9	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGAAGATGCCTCATG	399	False	NA	NA	False	NA	NA	NA	109609274	109612634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109609896_109611695_109611766_109612280
ES.8424.3	chr12	+	5844	27	Fusion	ENSMUSG00000070076.4_ENSMUSG00000097451.12	novel	3223	26	NA	NA	66	0	intron_retention	FALSE	canonical	0	0	junction_3	293.630722982609	646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	38	False	NA	NA	False	ACTAAA	-5	NA	109559345	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109560135_109560538_109560665_109566249_109566374_109570201_109570270_109570371_109570501_109572647_109572778_109573847_109573931_109583607_109583784_109586746_109586835_109591534_109591610_109593481_109593588_109600709_109600789_109601827_109601892_109604272_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.30	chr12	+	2437	12	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	234.556377476452	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	399	False	NA	NA	False	NA	NA	NA	109609274	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109609896_109611695_109611766_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.32	chr12	+	2193	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	208.64379783497	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2865	False	NA	NA	False	NA	NA	NA	109612563	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.34	chr12	+	3132	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	6	junction_1	206.686318790093	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.35	chr12	+	2206	9	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	208.348866087627	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616590_109620711_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.36	chr12	+	1881	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	1	486	1	-44	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGTGTTTCTCATGATT	2866	False	NA	NA	False	NA	NA	NA	109612564	109627657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.39	chr12	+	4075	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	549	junction_6	37.0565446311444	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.4	chr12	+	4210	1	FSM	ENSMUSG00000070133.3	ENSMUST00000093625.3	94	1	-1592	-2524	-1592	2524	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTGGCTGAAATTGAAAG	40	False	NA	NA	False	NA	NA	NA	109559347	109563557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109559300_109563600
ES.8424.40	chr12	+	2358	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1255	7	1	0	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2866	False	NA	NA	False	NA	NA	NA	109612564	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.42	chr12	+	1391	3	NNC	ENSMUSG00000097451.12	novel	3430	4	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTATCCAGTGACAGC	2866	False	NA	NA	False	NA	NA	NA	109612564	109617177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615578_109615677_109616505
ES.8424.44	chr12	+	1292	2	NIC	ENSMUSG00000097451.12	novel	3430	4	NA	NA	2	-5	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTATCCAGTGACAGC	2867	False	NA	NA	False	NA	NA	NA	109612565	109617177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109616505
ES.8424.45	chr12	+	1388	3	ISM	ENSMUSG00000097451.12	ENSMUST00000238736.2	3430	4	673	2128	2	2	5prime_fragment	FALSE	canonical	3	609	junction_1	27.5	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAGTGACAGCTATAAGA	2867	False	NA	NA	False	CATAAA	-3	NA	109612565	109617184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_109613186_109615587_109615677_109616505
ES.8424.46	chr12	+	3219	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	2	0	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2867	False	NA	NA	False	ACTAAA	-5	NA	109612565	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.47	chr12	+	2615	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	-75	intron_retention	FALSE	canonical	2	6	junction_1	206.686318790093	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGGGTCTAAATATCTCT	2867	False	NA	NA	False	NA	NA	NA	109612565	109627626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.48	chr12	+	1658	8	NNC	ENSMUSG00000097451.12	novel	1627	11	NA	NA	2	-27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	286.413786579587	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCTTTGCTTCTCTTT	2867	False	NA	NA	False	NA	NA	NA	109612565	109627674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616590_109620711_109620867_109622282_109622369_109623221_109623266_109626156_109626242_109627179
ES.8424.49	chr12	+	3323	11	NNC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_8	282.420325047614	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109625808_109625921_109626156_109626242_109627179
ES.8424.5	chr12	+	4635	22	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-3	0	intron_retention	FALSE	canonical	0	0	junction_2	296.171519834365	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2187	False	NA	NA	False	ACTAAA	-5	NA	109570375	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109570501_109572647_109572776_109583644_109583784_109586746_109586835_109591534_109591610_109593481_109593588_109601827_109601892_109604272_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611237_109611337_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
ES.8424.50	chr12	+	3218	10	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_3	249.3582875213	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618286_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.51	chr12	+	3259	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	12	junction_9	194.744340160867	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141
ES.8424.52	chr12	+	3129	9	NNC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	2	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	261.76313243083	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGTGAAGTACA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109616498_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.53	chr12	+	2101	9	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	216.141735904938	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2867	False	NA	NA	False	NA	NA	NA	109612565	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620741_109624486_109624556_109626156_109626242_109627179
ES.8424.56	chr12	+	2411	11	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	190.767502473561	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2867	False	NA	NA	False	ACTAAA	-5	NA	109612565	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141
ES.8424.57	chr12	+	3173	9	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	274.445691348944	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2868	False	NA	NA	False	NA	NA	NA	109612566	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618286_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
ES.8424.58	chr12	+	2288	10	NIC	ENSMUSG00000097451.12	novel	1627	11	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	204.464612531797	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTGAAGTACAAT	2868	False	NA	NA	False	NA	NA	NA	109612566	109628144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109626156_109626242_109627179
ES.8424.6	chr12	+	3668	18	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	57	0	intron_retention	FALSE	canonical	1	1	junction_4	300.755024521763	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1472	False	NA	NA	False	NA	NA	NA	109583365	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109583784_109586746_109586835_109591534_109591610_109593481_109593588_109601827_109601892_109604272_109604361_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109612361_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624491_109624556_109626156_109626242_109627179
ES.8424.60	chr12	+	4774	10	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	3	0	intron_retention	FALSE	canonical	3	396	junction_2	80.6011365296826	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.61	chr12	+	2357	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	259.12588103511	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627141
ES.8424.62	chr12	+	2277	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	249.460355839966	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.63	chr12	+	2202	9	NNC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	261.499253106008	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616590_109620711_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
ES.8424.64	chr12	+	2378	11	NNC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	192.857071428558	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618286_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.65	chr12	+	2360	12	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	238.868648853211	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2868	False	NA	NA	False	NA	NA	NA	109612566	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141_109628027_109628069
ES.8424.66	chr12	+	2394	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	237.452332058458	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2868	False	NA	NA	False	NA	NA	NA	109612566	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627141
ES.8424.68	chr12	+	2223	12	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	187.962674332296	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109612892_109613040_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.69	chr12	+	2291	10	NNC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	206.409756683934	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2868	False	NA	NA	False	ACTAAA	-5	NA	109612566	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624514_109624556_109626156_109626242_109627179
ES.8424.7	chr12	+	2598	18	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-34	93	intron_retention	FALSE	canonical	1	1	junction_2	296.06833121326	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTTTGCAAGGTTTT	625	False	NA	NA	False	NA	NA	NA	109591534	109627516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109591610_109593481_109593588_109604272_109604361_109608998_109609087_109609847_109609896_109611237_109611337_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.71	chr12	+	3144	9	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	8	0	intron_retention	FALSE	canonical	2	4	junction_7	210.164816275227	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2873	False	NA	NA	False	ACTAAA	-5	NA	109612571	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109626156_109626242_109627179
ES.8424.72	chr12	+	3121	11	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_10	190.59800628548	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2875	False	NA	NA	False	NA	NA	NA	109612573	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179_109627995_109628086
ES.8424.73	chr12	+	3614	8	FSM	ENSMUSG00000097451.12_ENSMUSG00000084549.3	ENSMUST00000238357.2	1651	8	-1696	-267	-633	0	multi-exon	FALSE	canonical	3	23	junction_5	215.030040616066	610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	5707	False	NA	NA	False	ACTAAA	-5	NA	109615405	109628150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
ES.8424.74	chr12	+	1908	8	NNC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	279.598400042136	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	1332	False	NA	NA	False	NA	NA	NA	109617103	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_109617534_109618292_109618373_109620719_109620864_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626246_109627186
ES.8424.8	chr12	+	3319	17	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-78	2	intron_retention	FALSE	canonical	1	1	junction_1	304.899676123147	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTTTTCTACCAT	2595	False	NA	NA	False	NA	NA	NA	109593504	109627418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109593588_109604272_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611237_109611337_109611695_109611766_109612280_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8424.9	chr12	+	3120	16	NIC	ENSMUSG00000097451.12	novel	3223	26	NA	NA	-78	0	intron_retention	FALSE	canonical	1	1	junction_1	306.03089168688	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2595	False	NA	NA	False	NA	NA	NA	109593504	109628143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109593588_109604272_109604361_109606700_109606763_109608998_109609087_109609847_109609896_109611695_109611766_109612280_109612361_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ES.8425.1	chr12	-	1029	1	Intergenic	novelGene_6956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTATTCTGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	109568259	109567230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109567200_109568300
ES.8426.1	chr12	-	2523	2	Antisense	novelGene_ENSMUSG00000080406.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCCTTTCTAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	109583652	109571451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109573928_109583605
ES.8426.2	chr12	-	3482	1	Antisense	novelGene_ENSMUSG00000097451.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCCTTTCTAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	109574933	109571451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109571500_109574900
ES.8426.3	chr12	-	2580	10	Antisense	novelGene_ENSMUSG00002076690.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTAACCCTTT	5252	False	NA	NA	False	NA	NA	NA	109610341	109571461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109572778_109573847_109573928_109583605_109583782_109586744_109586833_109591532_109591609_109593480_109593586_109604265_109604361_109606700_109606760_109608995_109609087_109609847
ES.8426.4	chr12	-	3979	1	Antisense	novelGene_ENSMUSG00002076155.1_AS_novelGene_ENSMUSG00002075266.1_AS_novelGene_ENSMUSG00000097451.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	795	False	NA	NA	False	TTTAAA	-36	NA	109603622	109599643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109599600_109603600
ES.8427.1	chr12	-	4252	2	Antisense	novelGene_ENSMUSG00000065013.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCACCAAAAAAACACCA	NA	False	NA	NA	False	NA	NA	NA	109620949	109615938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109617534_109618292
ES.8428.1	chr12	-	4092	2	Antisense	novelGene_ENSMUSG00000102657.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGAAGTACAAAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	109638664	109633027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109633152_109634696
ES.8429.1	chr12	-	1031	1	Antisense	novelGene_ENSMUSG00000102657.2_AS_novelGene_ENSMUSG00000065757.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAACTTAACTATTGT	NA	False	NA	NA	False	AATACA	-38	NA	109641135	109640104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109640100_109641100
ES.843.1	chr1	+	3713	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	79942115	79945828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_79942100_79945800
ES.8430.1	chr12	+	7482	1	NIC	ENSMUSG00000098202.3	novel	3230	17	NA	NA	185	36	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAACAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	109661575	109669057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109661600_109669100
ES.8431.1	chr12	-	5135	1	Antisense	novelGene_ENSMUSG00000070105.5_AS_novelGene_ENSMUSG00000076396.3_AS_novelGene_ENSMUSG00000076272.3_AS_novelGene_ENSMUSG00000076241.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGACTCTGGTGTCCT	NA	False	NA	NA	False	AATATA	-44	NA	109687876	109682741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109682700_109687900
ES.8432.1	chr12	-	1524	1	Antisense	novelGene_ENSMUSG00000076006.4_AS_novelGene_ENSMUSG00000077980.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-10	NA	109689871	109688347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109688300_109689900
ES.8433.1	chr12	+	6256	16	Fusion	ENSMUSG00000097391.9_ENSMUSG00000098807.4	novel	3797	17	NA	NA	73	0	intron_retention	TRUE	non_canonical	0	0	junction_1	14.6250925922995	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGCGTGTCTGTATT	NA	False	NA	21	True	AATAAA	-21	NA	109690819	109715892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109692602_109696207_109696298_109696524_109696651_109696729_109697303_109697675_109698347_109699909_109700043_109700129_109700897_109700996_109701456_109704114_109704242_109706059_109706198_109706379_109706700_109708123_109708250_109708495_109708725_109710099_109710282_109714558_109714728_109715528
ES.8433.2	chr12	+	1203	7	NIC	ENSMUSG00000097391.9	novel	3187	15	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	20.573040611441	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	1312	False	NA	18	True	AATAAA	-18	NA	109701402	109715889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109701456_109704114_109704242_109706059_109706198_109708123_109708250_109708495_109708725_109714558_109714728_109715528
ES.8433.3	chr12	+	1247	7	NIC	ENSMUSG00000097391.9	novel	3187	15	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	19.2324956490022	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	1312	False	NA	18	True	AATAAA	-18	NA	109701402	109715889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109701456_109704114_109704242_109708123_109708250_109708495_109708725_109710099_109710282_109714558_109714728_109715528
ES.8433.4	chr12	+	3310	7	NIC	ENSMUSG00000097391.9	novel	3187	15	NA	NA	-12	-1	intron_retention	FALSE	canonical	1	2	junction_1	18.9384969484557	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATGCTTGCGTGTCTG	1312	False	NA	17	True	AATAAA	-17	NA	109701402	109715888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109701456_109704114_109704242_109706059_109708250_109708495_109708725_109710099_109710282_109714558_109714728_109715528
ES.8433.5	chr12	+	2514	4	NIC	ENSMUSG00000097391.9	novel	1300	8	NA	NA	2281	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	23.7954243967663	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	702	False	NA	18	True	AATAAA	-18	NA	109706494	109715889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_109708250_109708495_109708725_109714558_109714728_109715528
ES.8433.6	chr12	+	3956	2	Fusion	ENSMUSG00000076052.3_ENSMUSG00000097391.9	novel	634	4	NA	NA	-936	1903	intron_retention	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAGAGAAAA	1102	False	NA	NA	False	NA	NA	NA	109707906	109712070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109711165_109711372
ES.8433.7	chr12	+	3814	4	Fusion	ENSMUSG00000093351.3_ENSMUSG00000097391.9	novel	694	2	NA	NA	753	0	multi-exon	FALSE	non_canonical	0	0	junction_1	27.3414622058798	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	1379	False	NA	18	True	AATAAA	-18	NA	109710987	109715889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_109711165_109711372_109712043_109712121_109714728_109715528
ES.8433.8	chr12	+	3603	2	FSM	ENSMUSG00000093351.3_ENSMUSG00000097391.9	ENSMUST00000182300.2	694	2	-2912	3	1251	0	multi-exon	FALSE	canonical	3	58	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATGCTTGCGTGTCTGT	1877	False	NA	18	True	AATAAA	-18	NA	109711485	109715889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_109714728_109715528
ES.8434.1	chr12	-	2348	1	Antisense	novelGene_ENSMUSG00002075058.1_AS_novelGene_ENSMUSG00000097391.9_AS_novelGene_ENSMUSG00000077001.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAAAAAAAGAACGAT	NA	False	NA	NA	False	NA	NA	NA	109697228	109694880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109694900_109697200
ES.8435.1	chr12	-	4989	1	Antisense	novelGene_ENSMUSG00000065448.4_AS_novelGene_ENSMUSG00000065438.4_AS_novelGene_ENSMUSG00000097391.9_AS_novelGene_ENSMUSG00000070136.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACAAACGAGGAAGGAC	NA	False	NA	NA	False	NA	NA	NA	109708768	109703779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109703800_109708800
ES.8435.2	chr12	-	2905	3	Antisense	novelGene_ENSMUSG00000065438.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109708769	109703800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_109704239_109706056_109708249_109708494
ES.8436.1	chr12	-	4077	2	Intergenic	novelGene_6957	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATTGAGAA	NA	False	NA	NA	False	NA	NA	NA	109773568	109768998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109769409_109769901
ES.8437.1	chr12	-	99	1	Intergenic	novelGene_6958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGGTTTCGTCGCTTCT	NA	False	NA	NA	False	NA	NA	NA	109780236	109780137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109780100_109780200
ES.8438.1	chr12	-	160	1	Intergenic	novelGene_6959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	109848860	109848700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_109848700_109848900
ES.8439.1	chr12	-	772	1	FSM	ENSMUSG00000113625.2	ENSMUST00000222259.2	642	1	-39	-91	-39	91	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACCTGTCAGGTCACT	NA	False	NA	NA	False	AATAAA	-42	NA	109861566	109860794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_109860800_109861600
ES.844.1	chr1	-	2416	4	FSM	ENSMUSG00000043230.3	ENSMUST00000161427.2	726	4	-64	-1626	-64	7	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTCATGGATATGATA	NA	False	NA	NA	False	AATAAA	-21	NA	80196254	80176415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80178266_80193858_80194107_80195532_80195754_80196157
ES.8440.1	chr12	+	135	1	Intergenic	novelGene_6960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	109907082	109907217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_109907100_109907200
ES.8441.1	chr12	+	3620	2	Intergenic	novelGene_6961	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGAACATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	109915272	109919716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_109918700_109919523
ES.8441.2	chr12	+	416	2	Intergenic	novelGene_6962	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	109918427	109919674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_109918693_109919523
ES.8442.1	chr12	+	158	1	Intergenic	novelGene_6963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTTTAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	109968447	109968605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_109968400_109968600
ES.8443.1	chr12	-	157	1	Intergenic	novelGene_6964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	110160406	110160249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110160200_110160400
ES.8444.1	chr12	+	2167	2	Intergenic	novelGene_6965	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCGTCAGATACTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	110170775	110173045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110172492_110172594
ES.8445.1	chr12	-	1960	6	NNC	ENSMUSG00000113193.2	novel	1152	6	NA	NA	-15817	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGAGTGTGTGTGGTCA	NA	False	NA	NA	False	CATAAA	-28	NA	110218613	110191949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110192161_110192857_110192947_110193050_110193153_110193277_110194204_110194368_110194903_110218515
ES.8446.1	chr12	+	2935	1	FSM	ENSMUSG00000075707.7	ENSMUST00000173014.3	2030	1	-905	0	-905	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTCCGTTTATTT	NA	False	NA	27	True	AATAAA	-24	NA	110244596	110247531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110244600_110247500
ES.8447.1	chr12	-	5023	1	FSM	ENSMUSG00000080356.3	ENSMUST00000116706.3	82	1	-2277	-2664	-2277	2664	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTACAGTGTGGACTTAC	NA	False	NA	NA	False	AATAAA	-19	NA	110246840	110241817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110241800_110246800
ES.8447.2	chr12	-	2099	4	FSM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-718	-1	-718	1	multi-exon	FALSE	canonical	1	5	junction_3	2.05480466765633	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTGTACAGTGTGGACT	NA	False	NA	NA	False	AATAAA	-16	NA	110245324	110241820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110242012_110243059_110243861_110243984_110244184_110244416
ES.8447.3	chr12	-	2667	2	ISM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	-931	1	-931	-1	intron_retention	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACGTGTACAGTGTGGA	NA	False	NA	NA	False	AATAAA	-14	NA	110245537	110241822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110242012_110243059
ES.8448.1	chr12	-	318	1	Intergenic	novelGene_6966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGAGCAACTTCCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	110247850	110247532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110247500_110247800
ES.8449.1	chr12	+	1231	2	Intergenic	novelGene_6968	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCATAGTGTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	110251613	110253383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110251747_110252285
ES.845.1	chr1	+	176	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80239215	80239391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_80239200_80239400
ES.8450.1	chr12	+	156	1	Intergenic	novelGene_6969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	110349203	110349359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110349200_110349400
ES.8451.1	chr12	-	1854	5	Antisense	novelGene_ENSMUSG00000114183.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.57071421427143	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTCCAATCAGATT	7190	False	NA	NA	False	AATAAA	-28	NA	110386402	110249686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_110251025_110252234_110252333_110253294_110253364_110255339_110255571_110386284
ES.8451.2	chr12	-	697	6	Intergenic	novelGene_6967	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.99332590941915	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTTTTCTACTT	NA	False	NA	NA	False	TTTAAA	-29	NA	110254384	110249742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110249896_110250719_110250838_110250953_110251025_110252234_110252424_110253294_110253364_110254287
ES.8452.1	chr12	+	172	1	Intergenic	novelGene_6970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGGAAAGTAGGCC	NA	False	NA	NA	False	NA	NA	NA	110405804	110405976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110405800_110406000
ES.8453.1	chr12	+	1610	13	NNC	ENSMUSG00000017843.15	novel	1802	3	NA	NA	-526	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	440.775453037031	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCTCTTGTATAAGT	NA	False	NA	12	True	AATAAA	-17	NA	110413027	110537344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413163_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517542_110519218_110519259_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.10	chr12	+	4610	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	3	True	AATAAA	-17	NA	110413526	110549496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.11	chr12	+	4491	18	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	426.225292539051	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGCTCTATGAAACTAAA	NA	False	NA	1	True	AATAAA	-15	NA	110413530	110549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413572_110413684_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.12	chr12	+	6115	12	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-22	-3395	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	390.031891046178	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCAGCGTGTCCTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	110413531	110533950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110529290
ES.8453.14	chr12	+	4369	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-22	-236	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	NA	False	NA	72	True	AATAAA	-26	NA	110413531	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.15	chr12	+	4536	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-22	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	394.62378145379	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413531	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.16	chr12	+	3305	13	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-17	0	intron_retention	FALSE	canonical	3	197	junction_1	334.181202925731	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110413536	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.17	chr12	+	4424	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	428.334054474101	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413539	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.18	chr12	+	4237	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	365.461044638042	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413541	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.19	chr12	+	4063	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-10	-462	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	394.62378145379	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTCTAGTTTGGCAC	NA	False	NA	23	True	AATAAA	-20	NA	110413543	110549034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.2	chr12	+	1706	14	NNC	ENSMUSG00000017843.15	novel	1802	3	NA	NA	-484	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	352.571349109677	584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110413069	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413163_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.20	chr12	+	1053	4	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-5	-38606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.0095393832781	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGCCAGGTCTTCCC	NA	False	NA	NA	False	ATTAAA	-20	NA	110413548	110478938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110478394
ES.8453.22	chr12	+	4122	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	1	-460	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTAGTTTGGCACCT	NA	False	NA	25	True	AATAAA	-22	NA	110413554	110549036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.23	chr12	+	3895	4	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	9	31713	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.0095393832781	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTATCATTGCCC	NA	False	NA	NA	False	NA	NA	NA	110413562	110449146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110445746
ES.8453.24	chr12	+	1784	3	FSM	ENSMUSG00000017843.15	ENSMUST00000222276.2	1802	3	18	0	18	0	multi-exon	FALSE	canonical	2	8	junction_2	94.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTGTGCGTTTTGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	110413571	110417433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110413820_110414405_110414472_110415963
ES.8453.26	chr12	+	593	3	NNC	ENSMUSG00000017843.15	novel	1802	3	NA	NA	25	-21	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	95	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTTTGAGTCTCGT	NA	False	NA	NA	False	TTTAAA	-43	NA	110413578	110417412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110417126
ES.8453.27	chr12	+	2546	15	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	373.048609843439	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATCAGTGTGTATTTT	NA	False	NA	10	True	AATAAA	-12	NA	110413580	110538118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413712_110413790_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.28	chr12	+	1655	13	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	52	-1	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	379.90817604024	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCTCTTGTATAAGT	NA	False	NA	12	True	AATAAA	-17	NA	110413605	110537344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110534161_110534290_110535387_110535490_110537129
ES.8453.29	chr12	+	4407	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	57	-2	combination_of_known_splicesites	FALSE	canonical	3	18	junction_14	397.170302123521	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGCTCTATGAAACTAAA	NA	False	NA	1	True	AATAAA	-15	NA	110413610	110549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110544534_110544603_110546834
ES.8453.3	chr12	+	2477	14	NNC	ENSMUSG00000017843.15	novel	1802	3	NA	NA	-478	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	352.571349109677	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	NA	False	NA	14	True	AATAAA	-16	NA	110413075	110538122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413163_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.30	chr12	+	3194	2	ISM	ENSMUSG00000017843.15	ENSMUST00000222276.2	1802	3	100	0	-32	0	intron_retention	FALSE	canonical	3	197	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTGTGCGTTTTGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	110413653	110417433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110413820_110414405
ES.8453.31	chr12	+	4164	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-26	-245	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	394.62378145379	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAAAATAGGTTAAGTG	NA	False	NA	63	True	AATAAA	-17	NA	110413659	110549251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.32	chr12	+	4460	17	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	413.123350034527	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413682	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541303_110544534_110544603_110546834
ES.8453.33	chr12	+	4065	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	388.01169688951	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	NA	False	NA	2	True	AATAAA	-16	NA	110413685	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.34	chr12	+	4471	16	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	407.868475532657	617	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGCTCTATGAAACTAAA	NA	False	NA	1	True	AATAAA	-15	NA	110413691	110549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110429421_110429635_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.35	chr12	+	1662	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	16600	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	324.73886945257	575	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110430340	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110430456_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.36	chr12	+	3901	14	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	16639	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	356.852048635544	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGGTTAAGTGGCAC	NA	False	NA	67	True	AATAAA	-21	NA	110430379	110549255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110430456_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.37	chr12	+	2812	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	17806	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	324.73886945257	582	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	NA	False	NA	15	True	AATAAA	-17	NA	110431546	110538123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110432034_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.38	chr12	+	2549	12	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	18318	1	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	212.285944692647	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	NA	False	NA	15	True	AATAAA	-17	NA	110432058	110538123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.39	chr12	+	1702	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1784	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	278.776903604784	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	3136	False	NA	13	True	AATAAA	-18	NA	110450387	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.4	chr12	+	4204	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-42	-236	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	NA	False	NA	72	True	AATAAA	-26	NA	110413511	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.40	chr12	+	4344	14	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	-1783	0	at_least_one_novel_splicesite	FALSE	canonical	1	38	junction_1	317.378313819392	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	3137	False	NA	3	True	AATAAA	-17	NA	110450388	110549496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110450715_110452262_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.41	chr12	+	3853	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1704	-288	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	330.420943646131	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATGTCCTATGTACA	3216	False	NA	20	True	AATAAA	-22	NA	110450467	110549208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.42	chr12	+	4105	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1668	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	330.420943646131	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	3252	False	NA	3	True	AATAAA	-17	NA	110450503	110549496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.43	chr12	+	1893	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1627	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	356.802777766965	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	3293	False	NA	14	True	AATAAA	-16	NA	110450544	110538122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110537631
ES.8453.44	chr12	+	2103	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	-513	777	-513	0	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	4407	False	NA	13	True	AATAAA	-18	NA	110451658	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.45	chr12	+	4052	2	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	-22	45383	-22	-24805	5prime_fragment	FALSE	canonical	3	738	junction_1	0	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	4898	False	NA	NA	False	NA	NA	NA	110452149	110492739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110452387_110488924
ES.8453.46	chr12	+	4080	15	FSM	ENSMUSG00000017843.15	ENSMUST00000221074.2	1971	15	-143	-1966	-22	-236	multi-exon	FALSE	canonical	3	61	junction_14	373.202494687289	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	4898	False	NA	72	True	AATAAA	-26	NA	110452149	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.47	chr12	+	2389	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	-21	-1	-21	1	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	4899	False	NA	15	True	AATAAA	-17	NA	110452150	110538123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.48	chr12	+	3892	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	-20	236	-19	-236	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	4901	False	NA	72	True	AATAAA	-26	NA	110452152	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.49	chr12	+	1941	13	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_12	268.830130173106	580	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATCAGTGTGTATTTT	4913	False	NA	10	True	AATAAA	-12	NA	110452164	110538118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110537631
ES.8453.5	chr12	+	2698	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-41	1	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	321.388242421629	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	NA	False	NA	15	True	AATAAA	-17	NA	110413512	110538123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.50	chr12	+	4126	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	-8	-10	-7	10	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAATTTAGCCATGGC	4913	False	NA	13	True	AATAAA	-27	NA	110452164	110549506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.51	chr12	+	3650	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	-6	464	-5	-464	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGGCTCTAGTTTGGC	4915	False	NA	21	True	AATAAA	-18	NA	110452166	110549032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.53	chr12	+	4300	15	FSM	ENSMUSG00000017843.15	ENSMUST00000221074.2	1971	15	-108	-2221	12	19	multi-exon	FALSE	canonical	3	61	junction_14	373.202494687289	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCATGGCGTTGGGCAG	4933	False	NA	22	True	AATAAA	-36	NA	110452184	110549515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.54	chr12	+	3427	11	NIC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	38	1	intron_retention	FALSE	canonical	3	738	junction_1	90.4822634553314	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGTATTTTCCTAT	4959	False	NA	15	True	AATAAA	-17	NA	110452210	110538123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110535490_110537129
ES.8453.55	chr12	+	990	6	NIC	ENSMUSG00000017843.15	novel	2367	12	NA	NA	41	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	392.792362451207	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	4962	False	NA	13	True	AATAAA	-18	NA	110452213	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110452387_110488924_110489125_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.56	chr12	+	4201	14	FSM	ENSMUSG00000017843.15	ENSMUST00000084985.11	1847	14	-78	-2276	42	18	multi-exon	FALSE	canonical	3	17	junction_13	338.054020402153	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCCATGGCGTTGGGCA	4963	False	NA	21	True	AATAAA	-35	NA	110452214	110549514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.57	chr12	+	2285	13	NNC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	44	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	278.794428447437	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGTGTGTATTTTCCT	4965	False	NA	13	True	AATAAA	-15	NA	110452216	110538121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537801_110537836
ES.8453.58	chr12	+	3721	14	FSM	ENSMUSG00000017843.15	ENSMUST00000084985.11	1847	14	-76	-1798	44	-460	multi-exon	FALSE	canonical	3	17	junction_13	338.054020402153	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTAGTTTGGCACCT	4965	False	NA	25	True	AATAAA	-22	NA	110452216	110549036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.59	chr12	+	4186	14	NNC	ENSMUSG00000017843.15	novel	1971	15	NA	NA	45	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	339.885187715503	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	4966	False	NA	2	True	AATAAA	-16	NA	110452217	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541303_110546834
ES.8453.6	chr12	+	2264	15	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-40	-3	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_14	367.682455054769	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATCAGTGTGTATTTTC	NA	False	NA	11	True	AATAAA	-13	NA	110413513	110538119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110537631
ES.8453.60	chr12	+	3786	15	FSM	ENSMUSG00000017843.15	ENSMUST00000221074.2	1971	15	-74	-1741	46	-461	multi-exon	FALSE	canonical	3	61	junction_14	373.202494687289	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTCTAGTTTGGCACC	4967	False	NA	24	True	AATAAA	-21	NA	110452218	110549035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.61	chr12	+	3884	14	FSM	ENSMUSG00000017843.15	ENSMUST00000084985.11	1847	14	-74	-1963	46	-295	multi-exon	FALSE	canonical	3	17	junction_13	338.054020402153	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTACAAAATGTCCT	4967	False	NA	13	True	AATAAA	-15	NA	110452218	110549201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ES.8453.62	chr12	+	1564	9	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	58	9742	57	-8965	5prime_fragment	FALSE	canonical	3	738	junction_1	95.1445446412983	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTCTCTCTTCATAA	4978	False	NA	NA	False	ATTAAA	-14	NA	110452229	110528380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731
ES.8453.63	chr12	+	3556	12	NIC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	57	-295	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	347.720701066838	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTACAAAATGTCCT	4978	False	NA	13	True	AATAAA	-15	NA	110452229	110549201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110452387_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.64	chr12	+	3461	14	NIC	ENSMUSG00000017843.15	novel	1971	15	NA	NA	-56	-651	combination_of_known_splicesites	FALSE	canonical	3	18	junction_12	342.085148056314	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAATTTTCTTTGGCAA	4985	False	NA	NA	False	AATAAA	-27	NA	110452236	110548845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110544534_110544603_110546834
ES.8453.65	chr12	+	4209	15	NNC	ENSMUSG00000017843.15	novel	1971	15	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	422.757354297054	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGCTCTATGAAACTAAA	5008	False	NA	1	True	AATAAA	-15	NA	110452259	110549494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537131_110537203_110541178_110541303_110544534_110544603_110546834
ES.8453.66	chr12	+	889	1	Intergenic	novelGene_6974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-22	NA	110458037	110458926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110458000_110458900
ES.8453.67	chr12	+	4196	15	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	11809	-1	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	420.367046855046	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	176	False	NA	2	True	AATAAA	-16	NA	110464101	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110464220_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ES.8453.68	chr12	+	4003	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	14015	-1	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	334.702386456984	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	2382	False	NA	2	True	AATAAA	-16	NA	110466307	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110466418_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.69	chr12	+	3709	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	14015	-295	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	334.702386456984	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTACAAAATGTCCT	2382	False	NA	13	True	AATAAA	-15	NA	110466307	110549201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110466418_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.7	chr12	+	4450	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-39	13	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATTTAGCCATGGCGTT	NA	False	NA	16	True	AATAAA	-30	NA	110413514	110549509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.70	chr12	+	3523	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	14036	-460	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	334.702386456984	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCTAGTTTGGCACCT	2403	False	NA	25	True	AATAAA	-22	NA	110466328	110549036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110466418_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.71	chr12	+	4388	15	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19321	-236	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	427.001917741715	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	7688	False	NA	72	True	AATAAA	-26	NA	110471613	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541303_110544534_110544603_110546834
ES.8453.72	chr12	+	1028	2	Intergenic	novelGene_6976	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCAGGTCTTCCCTT	7744	False	NA	NA	False	ATTAAA	-22	NA	110471669	110478940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110472152_110478394
ES.8453.73	chr12	+	4195	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19387	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	403.440964169788	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	7754	False	NA	3	True	AATAAA	-17	NA	110471679	110549496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.74	chr12	+	1836	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19397	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	284.406065190873	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCTCTTGTATAAGT	7764	False	NA	12	True	AATAAA	-17	NA	110471689	110537344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.75	chr12	+	2609	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19398	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	284.406065190873	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATCAGTGTGTATTTT	7765	False	NA	10	True	AATAAA	-12	NA	110471690	110538118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.76	chr12	+	4265	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19487	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	334.497467188551	555	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCTATGAAACTAAAT	7854	False	NA	2	True	AATAAA	-16	NA	110471779	110549495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.77	chr12	+	3094	11	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	19549	0	intron_retention	FALSE	canonical	3	12	junction_1	298.049744170331	522	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	7916	False	NA	13	True	AATAAA	-18	NA	110471841	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110472152_110488924_110489125_110510508_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.78	chr12	+	3809	1	Intergenic	novelGene_6977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACCTACTACTATTTTT	NA	False	NA	NA	False	NA	NA	NA	110479408	110483217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110479400_110483200
ES.8453.79	chr12	+	2279	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	33267	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	287.785847836331	524	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGTGTGTATTTTCCT	1460	False	NA	13	True	AATAAA	-15	NA	110485559	110538121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110485688_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.8	chr12	+	3970	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-34	-462	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTCTAGTTTGGCAC	NA	False	NA	23	True	AATAAA	-20	NA	110413519	110549034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.80	chr12	+	3179	9	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	58515	4	58394	-4	3prime_fragment	FALSE	canonical	3	880	junction_1	48.641385414069	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATCAGTGTGTATTTT	9880	False	NA	10	True	AATAAA	-12	NA	110510686	110538118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.81	chr12	+	5541	7	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	61399	1	61278	-1	3prime_fragment	FALSE	canonical	3	966	junction_6	26.5685695679856	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGTGTGTATTTTCCT	NA	False	NA	13	True	AATAAA	-15	NA	110513570	110538121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8453.82	chr12	+	3006	7	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	67044	295	66924	-295	3prime_fragment	FALSE	canonical	3	190	junction_6	307.563362938797	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTACAAAATGTCCT	3006	False	NA	13	True	AATAAA	-15	NA	110519216	110549201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ES.8453.83	chr12	+	220	1	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	84833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	513	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110537125	110537345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110537100_110537300
ES.8453.85	chr12	+	5787	1	NIC	ENSMUSG00000017843.15	novel	4108	13	NA	NA	91181	-236	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTAAGTGGCACAGTTA	NA	False	NA	72	True	AATAAA	-26	NA	110543473	110549260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110543500_110549300
ES.8453.9	chr12	+	1913	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	-28	6	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	321.388242421629	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGTATAAGTACTTATT	NA	False	NA	19	True	AATAAA	-24	NA	110413525	110537351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ES.8454.1	chr12	-	177	1	Intergenic	novelGene_6971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGGCCA	1728	False	NA	NA	False	NA	NA	NA	110433304	110433127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110433100_110433300
ES.8455.1	chr12	-	1591	1	Genic_Genomic	ENSMUSG00000113585.2	novel	NA	NA	NA	NA	-2003	26	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAGCCAAAGGTTTTC	NA	False	NA	NA	False	NA	NA	NA	110447231	110445640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_110445600_110447200
ES.8456.1	chr12	-	1647	13	Intergenic	novelGene_6973	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACTGAAGCTCTCTGC	NA	False	NA	NA	False	AAGAAA	-33	NA	110547080	110452216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110452385_110488922_110489124_110510507_110510618_110512026_110512120_110512202_110512334_110517493_110517554_110519216_110519325_110521273_110521331_110527731_110527896_110534154_110534290_110535387_110535490_110537129_110537206_110546838
ES.8456.2	chr12	-	1818	13	Intergenic	novelGene_6972	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAACTGAAGCTCTCTGC	NA	False	NA	NA	False	AAGAAA	-33	NA	110541593	110452216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110452385_110488922_110489124_110510507_110510618_110512026_110512120_110512202_110512334_110517493_110517554_110519216_110519325_110521273_110521331_110527731_110527896_110534154_110534290_110535387_110535490_110537129_110537206_110541180
ES.8456.3	chr12	-	2374	1	Intergenic	novelGene_6975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAAGAAGT	5847	False	NA	NA	False	NA	NA	NA	110465567	110463193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110463200_110465600
ES.8456.4	chr12	-	1387	1	Intergenic	novelGene_6978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAGAAAACCACAGTAAAG	2181	False	NA	NA	False	NA	NA	NA	110484003	110482616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110482600_110484000
ES.8456.5	chr12	-	1119	1	Intergenic	novelGene_6979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGCAATAA	NA	False	NA	NA	False	NA	NA	NA	110504387	110503268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110503300_110504400
ES.8456.6	chr12	-	162	1	Intergenic	novelGene_6980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	110530696	110530534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110530500_110530700
ES.8457.1	chr12	-	2323	1	Antisense	novelGene_ENSMUSG00000113361.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCCTTCTATTT	NA	False	NA	NA	False	NA	NA	NA	110558026	110555703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_110555700_110558000
ES.8458.1	chr12	+	4170	1	Genic_Genomic	ENSMUSG00000018707.14	novel	NA	NA	NA	NA	-88	-36003	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAAAGCTTTCTGTAA	6383	False	NA	NA	False	AATAAA	-16	NA	110567797	110571967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_110567800_110572000
ES.8458.14	chr12	+	4508	1	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	18	-35559	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTAGTTGTTTCTTTTTC	6489	False	NA	NA	False	AAAAAG	-6	NA	110567903	110572411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110567900_110572400
ES.8458.17	chr12	+	14546	76	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	21	-21	intron_retention	FALSE	non_canonical	0	0	junction_68	150.351972237	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	6492	False	NA	18	True	AATAAA	-19	NA	110567906	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629122_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.19	chr12	+	14358	76	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	21	-26	intron_retention	FALSE	canonical	0	0	junction_61	152.362722766722	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGCTCCCGCCTCTTGCCG	6492	False	NA	13	True	AATAAA	-14	NA	110567906	110633353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625418_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.2	chr12	+	14425	77	FSM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	-80	-3	-80	3	multi-exon	TRUE	canonical	3	133	junction_1	148.379081411613	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTGGGAATCCTTG	6391	False	NA	42	True	AATAAA	-43	NA	110567805	110633382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.25	chr12	+	14250	77	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	29	-46	intron_retention	FALSE	non_canonical	0	0	junction_1	152.689051679451	701	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAACACTAAGCATGA	6500	False	NA	-7	True	NA	NA	NA	110567914	110633333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110568282_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628176_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.28	chr12	+	10853	63	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-14720	-21	intron_retention	FALSE	canonical	3	155	junction_3	142.812602336265	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	475	False	NA	18	True	AATAAA	-19	NA	110592237	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.29	chr12	+	10558	63	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-14604	-195	intron_retention	FALSE	non_canonical	0	0	junction_6	152.813214454663	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTAACGGTGTGGA	591	False	NA	NA	False	NA	NA	NA	110592353	110633184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595550_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623157_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.3	chr12	+	14403	77	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-71	-20	intron_retention	FALSE	canonical	0	0	junction_9	155.639100502615	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTCTTGCCGCTCTGC	6400	False	NA	19	True	AATAAA	-20	NA	110567814	110633359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585805_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606729_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.31	chr12	+	9922	58	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-11555	-21	intron_retention	FALSE	canonical	0	0	junction_50	142.288078204529	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	3640	False	NA	18	True	AATAAA	-19	NA	110595402	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629117_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.33	chr12	+	9627	56	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	28123	28	-10949	-28	3prime_fragment	FALSE	canonical	3	184	junction_4	135.066228015789	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGGCTCCCGCCTCTTGC	4246	False	NA	11	True	AATAAA	-12	NA	110596008	110633351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.34	chr12	+	9139	55	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-9985	-22	intron_retention	FALSE	non_canonical	0	0	junction_15	149.61595096993	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	5210	False	NA	17	True	AATAAA	-18	NA	110596972	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607251_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110624834_110624944_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.36	chr12	+	9124	53	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-9782	-21	intron_retention	FALSE	non_canonical	0	0	junction_7	157.960377212866	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	5413	False	NA	18	True	AATAAA	-19	NA	110597175	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602511_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609559_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625872_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.37	chr12	+	8349	49	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	32765	31	-6307	-31	3prime_fragment	FALSE	canonical	3	213	junction_3	125.931940875375	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACGGGCTCCCGCCTCT	8888	False	NA	8	True	AATAAA	-9	NA	110600650	110633348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.45	chr12	+	7393	45	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	35652	186	-3420	-186	3prime_fragment	FALSE	canonical	3	235	junction_1	119.602067047977	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTGTGGAAGGGTTGAT	2045	False	NA	NA	False	NA	NA	NA	110603537	110633193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.46	chr12	+	7556	45	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	35652	23	-3420	-23	3prime_fragment	FALSE	canonical	3	235	junction_1	119.602067047977	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCGCCTCTTGCCGCTC	2045	False	NA	16	True	AATAAA	-17	NA	110603537	110633356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.47	chr12	+	6933	42	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	38280	22	-792	-22	3prime_fragment	FALSE	canonical	3	255	junction_4	114.905289090777	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	4673	False	NA	17	True	AATAAA	-18	NA	110606165	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.48	chr12	+	7072	41	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	38280	24	-792	-24	intron_retention	FALSE	canonical	3	255	junction_4	107.650055155583	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCCGCCTCTTGCCGCT	4673	False	NA	15	True	AATAAA	-16	NA	110606165	110633355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727
ES.8458.49	chr12	+	6566	40	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	39040	22	-32	-22	3prime_fragment	FALSE	canonical	3	255	junction_2	112.265851004547	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	5433	False	NA	17	True	AATAAA	-18	NA	110606925	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.50	chr12	+	6468	41	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	17	-27	intron_retention	FALSE	non_canonical	0	0	junction_26	129.871850298669	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGGCTCCCGCCTCTTGCC	5482	False	NA	12	True	AATAAA	-13	NA	110606974	110633352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625618_110625661_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.52	chr12	+	6141	38	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	578	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	129.077634749593	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCAGTCTGCTGTGGG	6043	False	NA	34	True	AATAAA	-35	NA	110607535	110633374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618501_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.56	chr12	+	5722	37	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	2596	-22	intron_retention	FALSE	canonical	1	4	junction_19	127.31364982632	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	201	False	NA	17	True	AATAAA	-18	NA	110609553	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110624834_110624944_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.57	chr12	+	5627	36	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	2604	-21	intron_retention	FALSE	non_canonical	0	0	junction_21	129.459598929944	691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	209	False	NA	18	True	AATAAA	-19	NA	110609561	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625363_110625657_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.58	chr12	+	178	1	Intergenic	novelGene_6983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGAGGC	1461	False	NA	NA	False	NA	NA	NA	110610813	110610991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110610800_110611000
ES.8458.59	chr12	+	181	1	Intergenic	novelGene_6984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCAGGGCTGG	2745	False	NA	NA	False	NA	NA	NA	110612097	110612278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110612100_110612300
ES.8458.6	chr12	+	14459	76	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-42	-5	intron_retention	FALSE	canonical	3	133	junction_1	148.220978572161	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCAGTCTGCTGTGGG	6429	False	NA	34	True	AATAAA	-35	NA	110567843	110633374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.60	chr12	+	5655	35	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	5670	-24	intron_retention	FALSE	non_canonical	0	0	junction_3	147.088305868221	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCCGCCTCTTGCCGCT	3275	False	NA	15	True	AATAAA	-16	NA	110612627	110633355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110612758_110614694_110614829_110615433_110615549_110615656_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629122_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.62	chr12	+	6044	34	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	5720	-21	intron_retention	FALSE	canonical	3	294	junction_2	102.532621519523	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	3325	False	NA	18	True	AATAAA	-19	NA	110612677	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.63	chr12	+	5542	34	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	46807	18	-5903	-18	3prime_fragment	FALSE	canonical	3	294	junction_1	102.279555327624	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCTTGCCGCTCTGCTC	5340	False	NA	21	True	AATAAA	-22	NA	110614692	110633361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.65	chr12	+	4896	30	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-5070	-23	intron_retention	FALSE	canonical	0	0	junction_4	153.788990203229	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCGCCTCTTGCCGCTC	57	False	NA	16	True	AATAAA	-17	NA	110615525	110633356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623157_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.66	chr12	+	5289	32	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	47761	22	-4949	-22	3prime_fragment	FALSE	canonical	3	314	junction_1	100.138270691199	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	178	False	NA	17	True	AATAAA	-18	NA	110615646	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.69	chr12	+	5219	30	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-4640	-21	intron_retention	FALSE	canonical	3	324	junction_3	97.7962890391125	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	487	False	NA	18	True	AATAAA	-19	NA	110615955	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.70	chr12	+	4400	29	NNC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	-2515	-2	intron_retention	FALSE	non_canonical	0	0	junction_14	130.708601554787	669	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTCTGCTGTGGGAAT	2612	False	NA	37	True	AATAAA	-38	NA	110618080	110633377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625393_110625657_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.71	chr12	+	5556	27	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	50670	-1171	-2040	1171	3prime_fragment	FALSE	canonical	3	354	junction_7	90.9071068234267	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACATTGTGTGTGTGT	3087	False	NA	NA	False	TTTAAA	-5	NA	110618555	110634550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.72	chr12	+	5150	26	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	51838	22	-872	-22	3prime_fragment	FALSE	canonical	3	354	junction_6	90.1456066594485	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCTTGCCGCTCT	4255	False	NA	17	True	AATAAA	-18	NA	110619723	110633357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.74	chr12	+	4097	25	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	53328	23	618	-23	3prime_fragment	FALSE	canonical	3	354	junction_5	90.3102580459902	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCGCCTCTTGCCGCTC	5745	False	NA	16	True	AATAAA	-17	NA	110621213	110633356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.75	chr12	+	4975	1	NIC	ENSMUSG00000018707.14	novel	14342	77	NA	NA	709	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTTGACAATTTAAGG	5836	False	NA	NA	False	NA	NA	NA	110621304	110626279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110621300_110626300
ES.8458.76	chr12	+	3971	24	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	53961	30	-992	-30	3prime_fragment	FALSE	canonical	3	354	junction_4	89.1785872049957	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACGGGCTCCCGCCTCTT	6378	False	NA	9	True	AATAAA	-10	NA	110621846	110633349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.77	chr12	+	2485	15	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	57637	21	-3	-21	3prime_fragment	FALSE	canonical	3	440	junction_2	73.4744506475495	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGCCTCTTGCCGCTCTG	NA	False	NA	18	True	AATAAA	-19	NA	110625522	110633358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8458.78	chr12	+	1189	6	ISM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	63083	1	1346	-1	3prime_fragment	FALSE	canonical	3	584	junction_1	43.3192797724062	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGCTGTGGGAATC	2187	False	NA	38	True	AATAAA	-39	NA	110630968	110633378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ES.8459.1	chr12	-	4385	2	Genic_Genomic	ENSMUSG00000113662.2_ENSMUSG00000113702.2	novel	2219	1	NA	NA	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGAAGTGGCTCATTC	NA	False	NA	NA	False	AGTAAA	-15	NA	110568397	110563043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_110566218_110567186
ES.846.1	chr1	+	4857	2	Antisense	novelGene_ENSMUSG00000004364.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATATA	-33	NA	80259648	80265381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_80260516_80261391
ES.8460.1	chr12	-	172	1	Intergenic	novelGene_6981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	110574801	110574629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110574600_110574800
ES.8461.1	chr12	-	172	1	Intergenic	novelGene_6982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAACTAACTAAAATGA	NA	False	NA	NA	False	NA	NA	NA	110610512	110610340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110610300_110610500
ES.8462.1	chr12	+	361	1	Intergenic	novelGene_6985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAATATGAAAGTGC	9233	False	NA	NA	False	NA	NA	NA	110638014	110638375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110638000_110638400
ES.8462.2	chr12	+	177	2	Intergenic	novelGene_6986	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAAGAGAA	9410	False	NA	NA	False	NA	NA	NA	110638191	110646964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110638337_110646932
ES.8462.3	chr12	+	215	1	Intergenic	novelGene_6988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	110646788	110647003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110646800_110647000
ES.8463.1	chr12	+	194	1	Intergenic	novelGene_6989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGAACTCAGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	110647983	110648177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110648000_110648200
ES.8464.1	chr12	+	1843	10	Antisense	novelGene_ENSMUSG00000021270.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGCGCCGCCCCCTGCGC	NA	False	NA	NA	False	AATGAA	-44	NA	110658853	110662742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_110658880_110659035_110659305_110659451_110659602_110659745_110659937_110660144_110660311_110660456_110660776_110661002_110661137_110661483_110661852_110661951_110662115_110662685
ES.8465.1	chr12	+	158	1	Intergenic	novelGene_6991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTAAAACA	NA	False	NA	NA	False	NA	NA	NA	110666039	110666197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110666000_110666200
ES.8466.1	chr12	-	171	1	Intergenic	novelGene_6987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGCTGATTACAAG	NA	False	NA	NA	False	NA	NA	NA	110642555	110642384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110642400_110642600
ES.8467.1	chr12	-	2757	12	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	11277	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3964.06981574899	7814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAGATGGCTCATTGG	NA	False	NA	NA	False	NA	NA	NA	110662741	110645761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110645771_110657483_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.10	chr12	-	4512	6	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-154	195	intron_retention	FALSE	canonical	3	11583	junction_4	1784.4009190762	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTCTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	110662983	110656843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110660311_110660456_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.100	chr12	-	4457	4	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	11583	junction_2	183.324848288496	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110660311_110660456_110661853_110661952_110662115_110662685
ES.8467.101	chr12	-	2653	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4153.52792815939	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662744	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660739_110661077_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.103	chr12	-	2276	9	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-656	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4626.89204373465	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110661382	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661283
ES.8467.104	chr12	-	2758	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-21	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4155.98905195863	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662744	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660300_110660452_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.109	chr12	-	5171	2	ISM	ENSMUSG00000021270.14	ENSMUST00000124156.8	427	3	-49	-4233	-18	-9	intron_retention	FALSE	canonical	3	11583	junction_1	0	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAAGTGTGGAATGT	NA	False	NA	-14	True	GATAAA	-12	NA	110662741	110657470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110661853_110661952
ES.8467.110	chr12	-	2750	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4042.49604205125	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAAGTGTGGAATGT	NA	False	NA	-14	True	GATAAA	-12	NA	110662741	110657470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659290_110659447_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.111	chr12	-	2384	10	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	5652.09376041686	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAAGTGTGGAATGT	NA	False	NA	-14	True	GATAAA	-12	NA	110662741	110657470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110660171_110660311_110660615_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.112	chr12	-	3115	9	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-10	intron_retention	FALSE	canonical	3	11114	junction_5	1540.61505574884	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGAAGTGTGGAATG	NA	False	NA	-15	True	GATAAA	-11	NA	110662741	110657471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.114	chr12	-	3261	8	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-10	intron_retention	FALSE	canonical	3	11114	junction_4	1646.27882182323	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGAAGTGTGGAATG	NA	False	NA	-15	True	GATAAA	-11	NA	110662743	110657471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.116	chr12	-	2757	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-22	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4155.98905195863	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAAAGAAGTGTGGAAT	NA	False	NA	-16	True	GATAAA	-10	NA	110662745	110657472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660462_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.119	chr12	-	2722	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-14	573	-14	-150	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAATTCCCCAAGTGGC	NA	False	NA	62	True	AGTAAA	-20	NA	110662843	110657611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.120	chr12	-	2621	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-73	733	-73	-310	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTCATGTTTGCTCTG	NA	False	NA	-98	True	NA	NA	NA	110662902	110657771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.121	chr12	-	2359	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	86	836	-20	-413	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAACTAAGGGGAAGAT	NA	False	NA	NA	False	TTTAAA	-14	NA	110662743	110657874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.122	chr12	-	1256	7	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	88	2848	-18	207	5prime_fragment	FALSE	canonical	3	11114	junction_3	508.718870191473	7477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAAATGCTGCAACAAAG	NA	False	NA	NA	False	NA	NA	NA	110662741	110659886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.123	chr12	-	882	5	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	84	3580	-22	-10	5prime_fragment	FALSE	canonical	3	11114	junction_1	618.781261836523	7275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAAAAGAAGAAGAT	NA	False	NA	96	True	NA	NA	NA	110662745	110660618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.124	chr12	-	604	4	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	254	-23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5680.15547518043	7256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATGGTGACAAGAAGA	NA	False	NA	83	True	NA	NA	NA	110661852	110660631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110660682_110660724_110660778_110661004_110661139_110661485
ES.8467.125	chr12	-	779	5	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	85	3682	-21	-112	5prime_fragment	FALSE	canonical	3	11114	junction_1	618.781261836523	7174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAGGAAGAGAAAGAAAA	NA	False	NA	-6	True	NA	NA	NA	110662744	110660720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.126	chr12	-	662	4	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	85	4026	-21	-2	5prime_fragment	FALSE	canonical	3	11583	junction_2	515.902014813752	7068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAGGAGATCGTGAA	NA	False	NA	-21	True	NA	NA	NA	110662744	110661064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.13	chr12	-	3011	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-149	419	-149	4	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGTGTCTTTTCTTTGC	NA	False	NA	-1	True	GATAAA	-25	NA	110662978	110657457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.14	chr12	-	3989	5	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	11114	junction_2	599.061349112092	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662741	110657461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110660311_110660456_110660778_110661004_110661139_110661485_110662115_110662685
ES.8467.15	chr12	-	3057	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-43	0	intron_retention	FALSE	canonical	3	11114	junction_6	1599.64232113168	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662872	110657461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.16	chr12	-	3841	6	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	58	0	intron_retention	FALSE	canonical	0	0	junction_5	5583.85754116274	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110669104	110657461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110660311_110660456_110661853_110661952_110662115_110669050
ES.8467.17	chr12	-	3891	6	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	0	intron_retention	FALSE	canonical	3	11114	junction_2	556.850213253079	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662743	110657461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.18	chr12	-	2793	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	4152.78023015907	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662655	110657461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662576
ES.8467.19	chr12	-	3738	8	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	45	-1	intron_retention	FALSE	canonical	3	11114	junction_5	1613.52229736116	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGAATGTGTCTTTTC	NA	False	NA	-6	True	GATAAA	-20	NA	110662784	110657462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952
ES.8467.20	chr12	-	2307	9	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	486	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4287.7311143978	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110661620	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658073_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485
ES.8467.22	chr12	-	1570	7	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	414	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5336.2734708367	7791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110660312	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110657682_110657841_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144
ES.8467.25	chr12	-	2868	11	FSM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	-18	2	-18	-2	multi-exon	FALSE	canonical	2	7	junction_10	4154.7402337571	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662215_110662685
ES.8467.28	chr12	-	2760	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4157.17972187876	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660152_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.3	chr12	-	2700	1	Intergenic	novelGene_6990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110653032	110650332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110650300_110653000
ES.8467.32	chr12	-	3234	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	11114	junction_6	989.428916217286	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662743	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.33	chr12	-	3731	7	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	11114	junction_3	700.379341658663	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658882_110659037_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.37	chr12	-	2773	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3846.06708339831	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658089_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.39	chr12	-	4066	6	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	11583	junction_5	1660.18849532214	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662743	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110661139_110661485_110661853_110661952
ES.8467.4	chr12	-	3915	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	88	-722	-18	722	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGCTTATTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	110662741	110656316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.40	chr12	-	3427	7	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-2	intron_retention	FALSE	canonical	3	11114	junction_3	1744.006785155	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662743	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.41	chr12	-	3716	6	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-2	intron_retention	FALSE	canonical	3	11114	junction_4	1814.77286733079	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGAATGTGTCTTTT	NA	False	NA	-7	True	GATAAA	-19	NA	110662741	110657463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110660778_110661004_110662115_110662685
ES.8467.42	chr12	-	2775	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4153.52792815939	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110660996_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.43	chr12	-	3424	7	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	11114	junction_3	1766.59893738097	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662743	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.45	chr12	-	2975	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	intron_retention	FALSE	canonical	3	11114	junction_6	1565.42138057631	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.47	chr12	-	2872	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-55	-3	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	4149.70050124102	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110669217	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110669056
ES.8467.48	chr12	-	2758	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4153.52792815939	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660769_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.5	chr12	-	3496	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	88	-303	-18	303	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTTCCAACTTGACT	NA	False	NA	NA	False	AATATA	-13	NA	110662741	110656735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.50	chr12	-	2883	12	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	5183.47018483031	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110669165	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110668789_110668853_110669056
ES.8467.52	chr12	-	2773	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4042.49604205125	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659447_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.53	chr12	-	3049	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-47	-3	intron_retention	FALSE	canonical	3	11114	junction_6	1479.99883216504	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662876	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.54	chr12	-	2924	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	4155.86029721886	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662656	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662443
ES.8467.55	chr12	-	2896	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	4147.74085014963	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662384	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662199
ES.8467.56	chr12	-	2762	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4156.70037409482	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662106_110662681
ES.8467.57	chr12	-	2756	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	4153.52792815939	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661015_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.59	chr12	-	3419	8	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-3	intron_retention	FALSE	canonical	3	11114	junction_5	1661.21295738864	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662743	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661853_110661952_110662115_110662685
ES.8467.6	chr12	-	3562	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	-84	-197	-84	197	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	7810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTCTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	110662913	110656841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.60	chr12	-	2757	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4157.17972187876	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659927_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.61	chr12	-	2811	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	1799	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	4155.86029721886	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110667363	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110667263
ES.8467.62	chr12	-	2817	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	4156.70037409482	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662785	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662121_110662685
ES.8467.63	chr12	-	2757	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3846.06708339831	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662741	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658080_110658553_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.64	chr12	-	3204	9	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	5	-3	intron_retention	FALSE	canonical	3	11114	junction_5	1623.02687419987	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662824	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.65	chr12	-	2839	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	4155.49854530115	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGAATGTGTCTTT	NA	False	NA	-8	True	GATAAA	-18	NA	110662840	110657464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660171_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.68	chr12	-	2526	9	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	261	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4625.09141632628	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110661845	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659596_110659750_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485
ES.8467.69	chr12	-	3065	9	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	11114	junction_5	1556.51853104934	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.72	chr12	-	2777	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	4155.98905195863	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660324_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.73	chr12	-	4208	4	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	11919	junction_3	398.619562434604	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110660311_110660456_110661139_110661485_110662115_110662685
ES.8467.74	chr12	-	2745	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4127.13144932409	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658874_110659046_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.75	chr12	-	2741	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	4156.42034568209	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662706
ES.8467.78	chr12	-	2689	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	4140.30419293076	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661066_110661485_110661853_110661952_110662115_110662685
ES.8467.79	chr12	-	3983	6	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	11114	junction_4	1828.35926447731	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662842	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110659937_110660144_110660778_110661004_110661139_110661485
ES.8467.8	chr12	-	3013	4	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	2206	-195	103	195	intron_retention	FALSE	canonical	3	13179	junction_2	1329.22107516645	7796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTCTGGTCATGGTA	NA	False	NA	-2	True	NA	NA	NA	110660623	110656843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453
ES.8467.81	chr12	-	3563	6	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	intron_retention	FALSE	canonical	3	11114	junction_2	1910.13806830815	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.82	chr12	-	3907	5	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-15	-8	intron_retention	FALSE	canonical	3	11114	junction_2	2135.50234137076	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662738	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110660778_110661004_110661853_110661952_110662115_110662685
ES.8467.83	chr12	-	3275	8	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	11114	junction_4	1637.25290081419	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.84	chr12	-	3426	8	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-46	-8	intron_retention	FALSE	canonical	3	11583	junction_6	1556.78404778202	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662875	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110659602_110659745_110659937_110660144_110660311_110660456_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.86	chr12	-	3836	7	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	11114	junction_4	1702.57442323872	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110660778_110661004_110661139_110661485_110661853_110661952
ES.8467.88	chr12	-	1824	7	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	126	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	5338.60917176833	7791	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110660600	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659895_110660144_110660311_110660456
ES.8467.89	chr12	-	2753	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4042.49604205125	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659462_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.90	chr12	-	2908	10	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	intron_retention	FALSE	canonical	3	11114	junction_6	1604.26236270601	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ES.8467.91	chr12	-	1959	7	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5336.2734708367	7805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110660746	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660258_110660456
ES.8467.94	chr12	-	2741	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	4157.46175448434	7809	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662741	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661973_110662115_110662685
ES.8467.96	chr12	-	1909	2	FSM	ENSMUSG00000021270.14	ENSMUST00000129005.2	325	2	89	-1673	89	-8	multi-exon	FALSE	canonical	3	14594	junction_1	0	7789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110659525	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110659307_110659453
ES.8467.97	chr12	-	1511	6	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	524	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5786.12825298576	7791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110660202	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658884_110659142_110659307_110659453_110659602_110659745_110659937_110660144
ES.8467.98	chr12	-	2784	11	NNC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	4154.7402337571	7809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGTGGAATGTG	NA	False	NA	-13	True	GATAAA	-13	NA	110662743	110657469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662135_110662685
ES.8468.1	chr12	-	175	1	Intergenic	novelGene_6992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTACATC	2834	False	NA	NA	False	NA	NA	NA	110679780	110679605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110679600_110679800
ES.8469.1	chr12	+	136	1	Intergenic	novelGene_6993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	584	False	NA	NA	False	NA	NA	NA	110699663	110699799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110699700_110699800
ES.847.1	chr1	+	347	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAATCACTGAAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	80294572	80294919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_80294600_80294900
ES.8470.1	chr12	+	2445	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	-61	0	-13	0	multi-exon	FALSE	canonical	3	142	junction_2	4	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5285	False	NA	19	True	AATAAA	-18	NA	110704364	110761462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704712_110745729_110745913_110759547
ES.8470.10	chr12	+	2616	5	NIC	ENSMUSG00000037957.15	novel	1351	3	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5358	False	NA	NA	False	ATTAAA	-15	NA	110704437	110770672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
ES.8470.11	chr12	+	2688	4	NNC	ENSMUSG00000037957.15	novel	581	5	NA	NA	12	-6	intron_retention	FALSE	canonical	1	1	junction_2	68.6488650063981	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	5358	False	NA	13	True	AATAAA	-12	NA	110704437	110761456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110745729_110746325_110759547_110760202_110760291
ES.8470.12	chr12	+	1291	3	FSM	ENSMUSG00000037957.15	ENSMUST00000193053.6	1351	3	60	0	12	0	multi-exon	FALSE	canonical	3	22	junction_2	64	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5358	False	NA	NA	False	ATTAAA	-15	NA	110704437	110770672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704712_110745729_110745913_110769838
ES.8470.13	chr12	+	4563	6	NNC	ENSMUSG00000037957.15	novel	581	5	NA	NA	12	4035	intron_retention	FALSE	canonical	0	0	junction_2	10.5943381105192	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAGATAAATTTTAAG	5358	False	NA	NA	False	AATAAA	-17	NA	110704437	110765497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110708563_110708758_110719963_110720083_110745729_110746325_110759547_110760808_110763376
ES.8470.14	chr12	+	3837	4	NIC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	12	4034	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	55.7215298505783	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGTAGATAAATTTTAA	5358	False	NA	NA	False	AATAAA	-16	NA	110704437	110765496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376
ES.8470.15	chr12	+	3219	2	ISM	ENSMUSG00000037957.15	ENSMUST00000192870.6	572	4	24	10904	12	-10904	5prime_fragment	FALSE	canonical	3	150	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAATATATGTACATGAG	5358	False	NA	NA	False	AATAAA	-17	NA	110704437	110748674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110704712_110745729
ES.8470.16	chr12	+	2975	4	NNC	ENSMUSG00000037957.15	novel	581	5	NA	NA	12	-3	intron_retention	FALSE	canonical	1	1	junction_3	3.29983164553722	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGTTTGTAGAACTCT	5358	False	NA	16	True	AATAAA	-15	NA	110704437	110761459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110708563_110708758_110745729_110746325_110759547
ES.8470.17	chr12	+	3660	1	FSM	ENSMUSG00000037957.15	ENSMUST00000191983.2	2252	1	15	-1423	12	-579	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCTTTCTATAAGTGA	5358	False	NA	NA	False	NA	NA	NA	110704437	110708097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704400_110708100
ES.8470.18	chr12	+	3176	5	NNC	ENSMUSG00000037957.15	novel	1351	3	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.0397112120308	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATTTGTTTATCCTTTT	5358	False	NA	NA	False	ATTAAA	-14	NA	110704437	110770671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110745729_110745913_110758986_110760808_110763376_110763442_110769838
ES.8470.19	chr12	+	2022	5	NIC	ENSMUSG00000037957.15	novel	960	3	NA	NA	-1	-372	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTTTTCTTGCTTTTT	5371	False	NA	NA	False	AGTAAA	-10	NA	110704450	110770091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
ES.8470.2	chr12	+	2326	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	65.1357556697292	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAGTTTGTAGAACTC	5310	False	NA	15	True	AATAAA	-14	NA	110704389	110761458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110745729_110745913_110759547_110760202_110760291
ES.8470.20	chr12	+	3527	5	NNC	ENSMUSG00000037957.15	novel	581	5	NA	NA	1	3829	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	64.4515321772881	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCTCCTAATGTCGCAA	5373	False	NA	NA	False	AATAAA	-39	NA	110704452	110765291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110745729_110745913_110759547_110760202_110760291_110760808_110763376
ES.8470.21	chr12	+	6397	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	28	-4041	2	4041	multi-exon	FALSE	canonical	3	142	junction_2	4	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAATTTTAAGTCATTT	5374	False	NA	NA	False	AATAAA	-23	NA	110704453	110765503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704712_110745729_110745913_110759547
ES.8470.22	chr12	+	2913	3	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	75	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAGTTTGTAGAACTC	5374	False	NA	15	True	AATAAA	-14	NA	110704453	110761458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110745729_110745913_110758986
ES.8470.23	chr12	+	2148	4	NIC	ENSMUSG00000037957.15	novel	581	5	NA	NA	2	-310	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	70.0047617428034	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATTTATGCTTTAACT	5374	False	NA	NA	False	ATTAAA	-10	NA	110704453	110761152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110746222_110746325_110759547
ES.8470.24	chr12	+	3063	1	FSM	ENSMUSG00000037957.15	ENSMUST00000191983.2	2252	1	31	-842	2	842	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTTGCTTAGAAGTAT	5374	False	NA	NA	False	NA	NA	NA	110704453	110707516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704500_110707500
ES.8470.26	chr12	+	231	1	Intergenic	novelGene_6996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATTTTCTATATGCT	NA	False	NA	NA	False	AAAAAG	-33	NA	110733038	110733269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110733000_110733300
ES.8470.27	chr12	+	3743	1	NIC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	-2824	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	NA	False	NA	13	True	AATAAA	-12	NA	110757713	110761456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110757700_110761500
ES.8470.28	chr12	+	8232	2	ISM	ENSMUSG00000037957.15	ENSMUST00000194118.2	960	3	-666	-209	-666	0	intron_retention	FALSE	canonical	3	28	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	110759871	110770672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110760808_110763376
ES.8470.3	chr12	+	2096	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	-20	308	-8	-308	multi-exon	FALSE	canonical	3	142	junction_2	4	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTATGCTTTAACTGG	5326	False	NA	NA	False	ATTAAA	-12	NA	110704405	110761154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704712_110745729_110745913_110759547
ES.8470.4	chr12	+	6291	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	-9	-3898	3	3898	multi-exon	FALSE	canonical	3	142	junction_2	4	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTTTCACTGCTTTG	5337	False	NA	NA	False	AATGAA	-39	NA	110704416	110765360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110704712_110745729_110745913_110759547
ES.8470.5	chr12	+	2580	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	63.1682057859982	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	5338	False	NA	13	True	AATAAA	-12	NA	110704417	110761456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110708563_110708758_110745729_110745913_110759547
ES.8470.6	chr12	+	2505	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	66.001683480213	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	5338	False	NA	13	True	AATAAA	-12	NA	110704417	110761456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110719963_110720083_110745729_110745913_110759547
ES.8470.7	chr12	+	2688	5	NNC	ENSMUSG00000037957.15	novel	581	5	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60.2676322747128	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGTTTGTAGAACTCT	5352	False	NA	16	True	AATAAA	-15	NA	110704431	110761459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110704712_110708563_110708758_110719963_110720083_110745729_110745913_110759547
ES.8470.8	chr12	+	2591	4	NIC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	7	35	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	63.2525800966956	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTTTTTGTTTTGGCC	5353	False	NA	NA	False	AATATA	-35	NA	110704432	110770707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
ES.8470.9	chr12	+	1972	4	NIC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	11	-371	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	63.2525800966956	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTTTCTTGCTTTTTA	5357	False	NA	NA	False	AGTAAA	-11	NA	110704436	110770092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
ES.8471.1	chr12	+	174	1	Intergenic	novelGene_6997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAATCAGAA	NA	False	NA	NA	False	NA	NA	NA	110784085	110784259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110784100_110784300
ES.8472.1	chr12	+	269	1	Intergenic	novelGene_6999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTCTGAACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	110796957	110797226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110797000_110797200
ES.8472.2	chr12	+	160	1	Intergenic	novelGene_6998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	110796957	110797117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110797000_110797100
ES.8473.1	chr12	+	320	1	Intergenic	novelGene_7000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	110801814	110802134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110801800_110802100
ES.8474.1	chr12	+	2255	1	Intergenic	novelGene_7001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGGCTGGCGAGATG	NA	False	NA	NA	False	ACTAAA	-35	NA	110802263	110804518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110802300_110804500
ES.8475.1	chr12	+	218	1	Intergenic	novelGene_7002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATGTATAATTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	110804522	110804740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110804500_110804700
ES.8476.1	chr12	-	5020	2	Antisense	novelGene_ENSMUSG00000037957.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGGTATGAACTACTAA	NA	False	NA	NA	False	NA	NA	NA	110716047	110710375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_110712848_110713499
ES.8477.1	chr12	-	285	1	Intergenic	novelGene_6994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAAACCGGGAGGAC	NA	False	NA	NA	False	NA	NA	NA	110716626	110716341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110716300_110716600
ES.8477.2	chr12	-	178	1	Intergenic	novelGene_6995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTCAAGACA	NA	False	NA	NA	False	NA	NA	NA	110716627	110716449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110716400_110716600
ES.8478.1	chr12	-	5468	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	6685	3828	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	89.7228054520244	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTTTAAGTCTATGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	110800676	110770403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110796401_110796541_110800559
ES.8478.10	chr12	-	2992	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1825	0	intron_retention	FALSE	canonical	3	29	junction_1	92.4766862511844	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9497	False	NA	-3	True	AATATA	-18	NA	110805536	110774231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774552_110774638_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
ES.8478.11	chr12	-	4854	4	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	27444	0	intron_retention	TRUE	non_canonical	0	0	junction_3	96.9272350213751	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	NA	False	NA	-3	True	AATATA	-18	NA	110779917	110774231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110776458_110777038_110778496_110778663
ES.8478.13	chr12	-	1753	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-1	intron_retention	FALSE	canonical	3	80	junction_10	66.9540140693596	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7682	False	NA	-4	True	AATATA	-17	NA	110807351	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.14	chr12	-	1766	13	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1842	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	87.6188082294866	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	9514	False	NA	-4	True	AATATA	-17	NA	110805519	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780125_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110796401_110796541_110800559_110800675_110805381
ES.8478.15	chr12	-	1690	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	77.2745454331556	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7656	False	NA	-4	True	AATATA	-17	NA	110807377	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.16	chr12	-	1492	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	14	-1	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7686	False	NA	-4	True	AATATA	-17	NA	110807347	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.17	chr12	-	1499	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1805	-1	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	9477	False	NA	-4	True	AATATA	-17	NA	110805556	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.18	chr12	-	1229	3	NNC	ENSMUSG00000056458.17	novel	1132	7	NA	NA	31427	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	115.5	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	NA	False	NA	-4	True	AATATA	-17	NA	110775934	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110775229
ES.8478.19	chr12	-	1377	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	97.9986447610374	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7658	False	NA	-4	True	AATATA	-17	NA	110807375	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774552_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ES.8478.2	chr12	-	6886	8	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	11	3828	intron_retention	FALSE	canonical	3	36	junction_2	95.2806809550882	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTTTAAGTCTATGAT	7683	False	NA	NA	False	ATTAAA	-16	NA	110807350	110770403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.20	chr12	-	1627	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1814	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.9526572340586	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	9486	False	NA	-4	True	AATATA	-17	NA	110805547	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.21	chr12	-	1565	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	86.3355935332804	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7669	False	NA	-4	True	AATATA	-17	NA	110807364	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807260
ES.8478.23	chr12	-	1404	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	74.9615526453395	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7672	False	NA	-4	True	AATATA	-17	NA	110807361	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ES.8478.24	chr12	-	1299	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1844	-1	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_7	83.7383387403882	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	9516	False	NA	-4	True	AATATA	-17	NA	110805517	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
ES.8478.25	chr12	-	2895	7	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_6	113.388344492133	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7675	False	NA	-4	True	AATATA	-17	NA	110807358	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807260
ES.8478.26	chr12	-	2036	4	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	27667	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	84.163861339387	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	NA	False	NA	-4	True	AATATA	-17	NA	110779694	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774840_110776342_110776458_110778212_110778496_110778663
ES.8478.27	chr12	-	9318	5	ISM	ENSMUSG00000056458.17	ENSMUST00000021701.9	2829	6	19046	1	19034	-1	3prime_fragment	FALSE	canonical	3	96	junction_1	72.8744639774455	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	NA	False	NA	-4	True	AATATA	-17	NA	110788327	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564
ES.8478.28	chr12	-	1453	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	87.7762306474063	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7701	False	NA	-4	True	AATATA	-17	NA	110807332	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.29	chr12	-	1333	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-57	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	98.5228399915471	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7603	False	NA	-4	True	AATATA	-17	NA	110807430	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807260
ES.8478.3	chr12	-	5447	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1820	3825	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.9526572340586	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGTTTTAAGTCTAT	9492	False	NA	NA	False	ATTAAA	-13	NA	110805541	110770406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.30	chr12	-	1669	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_6	71.6609325657875	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7680	False	NA	-4	True	AATATA	-17	NA	110807353	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780125_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.31	chr12	-	1596	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.8416510191533	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7719	False	NA	-4	True	AATATA	-17	NA	110807314	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.32	chr12	-	1335	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-1	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	83.5867812515831	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7682	False	NA	-4	True	AATATA	-17	NA	110807351	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.33	chr12	-	1611	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-1	intron_retention	FALSE	canonical	1	1	junction_9	91.6248389418018	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7672	False	NA	-4	True	AATATA	-17	NA	110807361	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110807179
ES.8478.34	chr12	-	7608	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1824	-1	intron_retention	FALSE	canonical	3	29	junction_1	85.8953432963627	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	9496	False	NA	-4	True	AATATA	-17	NA	110805537	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774552_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110800675_110805381
ES.8478.35	chr12	-	1276	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	97.9903534793094	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGGTTTGTTTCATT	7682	False	NA	-4	True	AATATA	-17	NA	110807351	110774232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807260
ES.8478.36	chr12	-	5718	8	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	21184	-2	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	76.5906159328908	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	NA	False	NA	-5	True	AATATA	-16	NA	110786177	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564
ES.8478.37	chr12	-	3974	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-2	intron_retention	FALSE	non_canonical	0	0	junction_4	95.3984243842633	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7682	False	NA	-5	True	AATATA	-16	NA	110807351	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110778496_110778663_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.38	chr12	-	1247	9	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	107.355062176872	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7682	False	NA	-5	True	AATATA	-16	NA	110807351	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807260
ES.8478.39	chr12	-	1221	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	79.9971938283348	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7680	False	NA	-5	True	AATATA	-16	NA	110807353	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
ES.8478.4	chr12	-	6825	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	3825	intron_retention	FALSE	canonical	3	80	junction_9	72.7278030283696	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGTTTTAAGTCTAT	7682	False	NA	NA	False	ATTAAA	-13	NA	110807351	110770406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.40	chr12	-	4498	7	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	29	-2	intron_retention	FALSE	canonical	0	0	junction_3	89.2930568409437	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7701	False	NA	-5	True	AATATA	-16	NA	110807332	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110776458_110778212_110780128_110781355_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.41	chr12	-	4014	5	NNC	ENSMUSG00000056458.17	novel	2829	6	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_4	104.694794521982	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7666	False	NA	-5	True	AATATA	-16	NA	110807367	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110776458_110778212_110778315_110779948_110781451_110781564_110781644_110807260
ES.8478.42	chr12	-	4113	6	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	10	-2	intron_retention	FALSE	canonical	0	0	junction_5	100.467706254298	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAAGGGTTTGTTTCAT	7682	False	NA	-5	True	AATATA	-16	NA	110807351	110774233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110776458_110778212_110778315_110779948_110781451_110781564_110781644_110800559_110800675_110807260
ES.8478.43	chr12	-	1461	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	-3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	81.4503529765218	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9507	False	NA	-6	True	AATATA	-15	NA	110805526	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.44	chr12	-	1477	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1838	-3	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	78.692086288549	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9510	False	NA	-6	True	AATATA	-15	NA	110805523	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
ES.8478.45	chr12	-	1679	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1835	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	82.4239193398302	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9507	False	NA	-6	True	AATATA	-15	NA	110805526	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800521_110800675_110805381
ES.8478.46	chr12	-	1733	13	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1844	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	91.7137379143508	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9516	False	NA	-6	True	AATATA	-15	NA	110805517	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794212_110794314_110794474_110794565_110800559_110800675_110805381
ES.8478.48	chr12	-	1671	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1805	-3	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_11	66.2311254884822	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9477	False	NA	-6	True	AATATA	-15	NA	110805556	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.49	chr12	-	1145	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	83	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	106.041385836871	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7755	False	NA	-6	True	AATATA	-15	NA	110807278	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.5	chr12	-	5239	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	91	3823	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAATGTTTTAAGTCT	7763	False	NA	NA	False	ATTAAA	-11	NA	110807270	110770408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.50	chr12	-	1847	13	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1780	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	91.3319266923311	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9452	False	NA	-6	True	AATATA	-15	NA	110805581	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110785664_110785812_110792871_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.51	chr12	-	1556	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_5	81.5990696225472	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7667	False	NA	-6	True	AATATA	-15	NA	110807366	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781564_110781644_110800559_110800675_110807179
ES.8478.52	chr12	-	1654	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-45	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	79.4107430748666	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	7615	False	NA	-6	True	AATATA	-15	NA	110807418	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807260
ES.8478.53	chr12	-	4147	1	NIC	ENSMUSG00000056458.17	novel	1132	7	NA	NA	28980	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	NA	False	NA	-6	True	AATATA	-15	NA	110778381	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774200_110778400
ES.8478.54	chr12	-	5145	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1844	-3	intron_retention	FALSE	non_canonical	0	0	junction_3	91.2389347256781	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCAAGGGTTTGTTTCA	9516	False	NA	-6	True	AATATA	-15	NA	110805517	110774234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110777176_110778212_110778496_110778663_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.56	chr12	-	3244	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	-2	-4	intron_retention	FALSE	canonical	2	8	junction_6	92.0158333127887	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCAAGGGTTTGTTTC	7658	False	NA	-7	True	AATATA	-14	NA	110807375	110774235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792871_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.57	chr12	-	1465	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	12798	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	112.411253885009	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCAAGGGTTTGTTTC	NA	False	NA	-7	True	AATATA	-14	NA	110794563	110774235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110776824_110776944_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781640_110792867_110792947_110794474
ES.8478.59	chr12	-	3115	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1839	-5	intron_retention	FALSE	canonical	0	0	junction_3	99.443702666383	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATGCAAGGGTTTGTTT	9511	False	NA	-8	True	AATATA	-13	NA	110805522	110774236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774834_110776342_110776453_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110794565_110800559_110800675_110805381
ES.8478.6	chr12	-	7032	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	25	3823	intron_retention	FALSE	canonical	2	8	junction_6	92.0158333127887	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAATGTTTTAAGTCT	7697	False	NA	NA	False	ATTAAA	-11	NA	110807336	110770408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792871_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.60	chr12	-	3087	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	8	-6	intron_retention	FALSE	canonical	3	56	junction_6	82.494031942453	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATGCAAGGGTTTGTT	7680	False	NA	-9	True	AATATA	-12	NA	110807353	110774237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110774840_110776342_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.61	chr12	-	5853	6	NNC	ENSMUSG00000056458.17	novel	2829	6	NA	NA	14	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	130.357048140866	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTATGCAAGGGTTTGTT	7686	False	NA	-9	True	AATATA	-12	NA	110807347	110774237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774552_110774635_110778496_110778663_110780128_110781401_110781451_110781564_110781644_110807260
ES.8478.62	chr12	-	3141	7	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	6206	-7	intron_retention	FALSE	canonical	3	56	junction_6	85.7373249459586	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTATGCAAGGGTTTGT	NA	False	NA	-10	True	AATATA	-11	NA	110801155	110774238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559
ES.8478.63	chr12	-	2860	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1844	-12	intron_retention	FALSE	canonical	3	36	junction_4	68.5361948170454	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTTATGCAAGGG	9516	False	NA	-15	True	AATATA	-6	NA	110805517	110774243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
ES.8478.64	chr12	-	2172	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	-12	intron_retention	FALSE	canonical	3	56	junction_6	86.5428995896703	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTTATGCAAGGG	7672	False	NA	-15	True	AATATA	-6	NA	110807361	110774243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774840_110776342_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110807179
ES.8478.66	chr12	-	1449	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	11	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	97.273319905471	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTTATGCAAGGG	7683	False	NA	-15	True	AATATA	-6	NA	110807350	110774243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781637_110800563_110800675_110807179
ES.8478.7	chr12	-	9639	5	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	24119	3733	intron_retention	FALSE	canonical	3	231	junction_1	21.0297408448131	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGGGCATCTCCTCT	NA	False	NA	NA	False	AATAAA	-10	NA	110783242	110770498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774556_110774638_110778315_110779948_110780128_110781401_110781451_110781564
ES.8478.8	chr12	-	1593	10	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1	1	intron_retention	FALSE	canonical	3	80	junction_9	70.9795658301183	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGGGTTTGTTTCATTTT	7670	False	NA	-2	True	AATATA	-19	NA	110807363	110774230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ES.8478.9	chr12	-	2908	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1839	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	97.8628417861914	223	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9511	False	NA	-3	True	AATATA	-18	NA	110805522	110774231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778496_110778663_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
ES.8479.1	chr12	+	169	1	Intergenic	novelGene_7003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAATAAATA	NA	False	NA	NA	False	NA	NA	NA	110808479	110808648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110808500_110808600
ES.848.1	chr1	-	6263	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-222	-1332	-222	1332	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGCACAATTCTTGCAG	NA	False	NA	NA	False	AATAAA	-27	NA	80318419	80241307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.10	chr1	-	4910	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-215	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	160.764506862263	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAAGGATTCTTTATG	NA	False	NA	NA	False	AATAAA	-13	NA	80318412	80242647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267954_80281796_80281911_80300575_80300774_80317962
ES.848.11	chr1	-	4792	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-202	119	-202	-119	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCTTTGCTGTCATTC	NA	False	NA	NA	False	TATAAA	-23	NA	80318399	80242758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.12	chr1	-	4666	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-204	-119	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCTTTGCTGTCATTC	NA	False	NA	NA	False	TATAAA	-23	NA	80318401	80242758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.13	chr1	-	4148	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-229	-682	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	156.853521936073	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCTTGGATTATAATTT	NA	False	NA	-2	True	ATTAAA	-25	NA	80318426	80243321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962_80318148_80318255
ES.848.14	chr1	-	4134	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-238	-685	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCGTCTTGGATTATAA	NA	False	NA	-5	True	ATTAAA	-22	NA	80318435	80243324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.15	chr1	-	4556	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-532	685	-532	-685	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCGTCTTGGATTATAA	NA	False	NA	-5	True	ATTAAA	-22	NA	80318729	80243324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.16	chr1	-	4075	15	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-160	-686	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	166.711837416225	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGTCTTGGATTATA	NA	False	NA	-6	True	ATTAAA	-21	NA	80318357	80243325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.17	chr1	-	4288	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-272	-686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	160.764506862263	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGTCTTGGATTATA	NA	False	NA	-6	True	ATTAAA	-21	NA	80318469	80243325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281803_80281911_80300575_80300774_80317962
ES.848.18	chr1	-	4136	15	FSM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	-480	-1214	-311	-686	multi-exon	FALSE	canonical	1	7	junction_14	163.524322599522	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGTCTTGGATTATA	NA	False	NA	-6	True	ATTAAA	-21	NA	80318508	80243325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80317962
ES.848.19	chr1	-	4377	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-226	-686	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	200.559597984614	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCGTCTTGGATTATA	NA	False	NA	-6	True	ATTAAA	-21	NA	80318423	80243325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299630_80300575_80300774_80317962
ES.848.2	chr1	-	6119	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-152	1324	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_16	156.853521936073	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTTTAATGTGCACAAT	NA	False	NA	NA	False	AATAAA	-19	NA	80318349	80241315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962_80318139_80318204
ES.848.20	chr1	-	5461	15	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-216	-687	intron_retention	FALSE	canonical	3	483	junction_13	56.5978022938152	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGCGTCTTGGATTAT	NA	False	NA	-7	True	ATTAAA	-20	NA	80318413	80243326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.21	chr1	-	4130	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-199	-687	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	156.853521936073	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATGCGTCTTGGATTAT	NA	False	NA	-7	True	ATTAAA	-20	NA	80318396	80243326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962_80318196_80318286
ES.848.22	chr1	-	4317	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-196	-688	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_14	208.150336295669	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	-8	True	ATTAAA	-19	NA	80318393	80243327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80286233_80286334_80300575_80300774_80317962
ES.848.23	chr1	-	3979	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-127	-688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	209.637401243194	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	-8	True	ATTAAA	-19	NA	80318324	80243327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266535_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.24	chr1	-	4106	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-215	-690	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	156.170929993389	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCCATGCGTCTTGGAT	NA	False	NA	-10	True	ATTAAA	-17	NA	80318412	80243329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80244766_80244893_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.26	chr1	-	4231	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-228	-693	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	214.583772815084	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCCCATGCGTCTTG	NA	False	NA	-13	True	ATTAAA	-14	NA	80318425	80243332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259104_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267806_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.27	chr1	-	4241	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-201	-693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	203.697385844787	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCCCCATGCGTCTTG	NA	False	NA	-13	True	ATTAAA	-14	NA	80318398	80243332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299654_80300703_80300774_80317962
ES.848.28	chr1	-	3780	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-245	1174	-245	726	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTCTTCAGTTCTTGCA	NA	False	NA	NA	False	AATAAA	-23	NA	80318442	80243813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.29	chr1	-	3604	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-199	724	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTCTTCAGTTCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	80318396	80243815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.3	chr1	-	5631	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-209	-713	-209	713	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTAGTACTCTGGAGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	80318406	80241926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.30	chr1	-	3351	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-160	510	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAGTATGTCAGAGCAC	NA	False	NA	NA	False	AATAAA	-27	NA	80318357	80244029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.31	chr1	-	3515	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-202	1396	-202	504	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTAACTCAAGTATGTCA	NA	False	NA	NA	False	AATAAA	-21	NA	80318399	80244035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.32	chr1	-	2891	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	3	501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	209.891400490825	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACACTAACTCAAGTATG	NA	False	NA	NA	False	AATAAA	-18	NA	80318021	80244038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264730_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.33	chr1	-	3647	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-210	500	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	200.559597984614	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACACACTAACTCAAGTAT	NA	False	NA	NA	False	AATAAA	-17	NA	80318407	80244039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299630_80300575_80300774_80317962
ES.848.34	chr1	-	3002	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-202	119	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCTGCTTGTGACAT	NA	False	NA	92	True	NA	NA	NA	80318399	80244420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.35	chr1	-	3272	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-434	1871	-434	29	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTCTGTAGTGTTGC	NA	False	NA	2	True	AATAAA	-43	NA	80318631	80244510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.36	chr1	-	3191	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-219	11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	203.364474220548	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGTGTTGATGTAAAT	NA	False	NA	-16	True	AATAAA	-25	NA	80318416	80244528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299654_80300575_80300774_80317962
ES.848.37	chr1	-	3057	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-283	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	160.764506862263	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTGTTGATGTAAA	NA	False	NA	-17	True	AATAAA	-24	NA	80318480	80244529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267922_80281803_80281911_80300575_80300774_80317962
ES.848.38	chr1	-	2955	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-266	8	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTCAGTGTTGATGTA	NA	False	NA	-19	True	AATAAA	-22	NA	80318463	80244531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.39	chr1	-	3166	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-221	8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	200.559597984614	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTCAGTGTTGATGTA	NA	False	NA	-19	True	AATAAA	-22	NA	80318418	80244531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299630_80300575_80300774_80317962
ES.848.4	chr1	-	5446	15	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-201	713	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	162.591261657406	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTAGTACTCTGGAGTT	NA	False	NA	NA	False	TTTAAA	-15	NA	80318398	80241926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.41	chr1	-	4192	15	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-155	5	intron_retention	FALSE	canonical	3	483	junction_13	56.5978022938152	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTCTTCAGTGTTGAT	NA	False	NA	-22	True	AATAAA	-19	NA	80318352	80244534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.42	chr1	-	6611	14	ISM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	31887	-4	-30983	4	3prime_fragment	FALSE	canonical	3	546	junction_11	38.4199775449728	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGTCTTCAGTGTTGA	3741	False	NA	-23	True	AATAAA	-18	NA	80286141	80244535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796
ES.848.43	chr1	-	2783	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-204	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	161.858319389383	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGGTCTTCAGTGTTG	NA	False	NA	-24	True	AATAAA	-17	NA	80318401	80244536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264677_80266525_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.44	chr1	-	2929	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-222	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	161.666652920962	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCAGGTCTTCAG	NA	False	NA	-29	True	AATAAA	-45	NA	80318419	80244541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255728_80258571_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.45	chr1	-	3100	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-200	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	203.697385844787	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTTCCCCAGGTCTT	NA	False	NA	-32	True	AATAAA	-42	NA	80318397	80244544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299598_80300575_80300774_80317962
ES.848.47	chr1	-	2930	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-205	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	160.797374218473	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGATTTCATTTCCCC	NA	False	NA	-39	True	AATAAA	-35	NA	80318402	80244551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254202_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.48	chr1	-	4612	15	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-199	-12	intron_retention	FALSE	canonical	3	483	junction_13	54.3496334215901	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGATTTCATTTCCCC	NA	False	NA	-39	True	AATAAA	-35	NA	80318396	80244551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.5	chr1	-	4994	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-283	-2	-283	2	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTATGTCAGTGAACT	NA	False	NA	NA	False	AATAAA	-23	NA	80318480	80242637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.50	chr1	-	5639	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-204	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	161.666652920962	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAATTGTTGGATTT	NA	False	NA	45	True	AATAAA	-26	NA	80318401	80244560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80258453_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.51	chr1	-	2884	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-231	-28	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	156.170929993389	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCATTAAAATAAAATTGT	NA	False	NA	38	True	AATAAA	-19	NA	80318428	80244567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80244766_80244893_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.52	chr1	-	2468	15	NNC	ENSMUSG00000004364.15	novel	2442	15	NA	NA	24667	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	165.280790765044	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAAATTTA	NA	False	NA	9	True	AAAACA	-3	NA	80293329	80244596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80293180
ES.848.53	chr1	-	2959	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-213	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.101403538958	606	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAAATTTA	NA	False	NA	9	True	AAAACA	-3	NA	80318410	80244596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247067_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.55	chr1	-	2758	15	FSM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	-373	57	-204	-57	multi-exon	FALSE	canonical	1	7	junction_14	163.524322599522	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAAATTTA	NA	False	NA	9	True	AAAACA	-3	NA	80318401	80244596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80317962
ES.848.56	chr1	-	2435	15	ISM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-207	4403	-207	-2084	5prime_fragment	FALSE	canonical	3	483	junction_13	54.7376395515323	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAGAAACAAGACAG	NA	False	NA	NA	False	NA	NA	NA	80318404	80247042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ES.848.6	chr1	-	4783	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTTTATGTCAGTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	80318399	80242639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.848.7	chr1	-	4699	16	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-161	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	209.637401243194	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATTCTTTATGTCAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	80318358	80242641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266535_80267798_80267960_80281796_80281911_80300703_80300774_80317962
ES.8480.1	chr12	+	3368	10	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	0	4824	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	22.6050360389226	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTGGGTGGTGATGGC	NA	False	NA	NA	False	NA	NA	NA	110816712	110841254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110834917_110837654_110837731_110840171
ES.8480.11	chr12	+	4743	10	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	4	4809	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.3817377519009	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAACCAAACTGAG	NA	False	NA	NA	False	NA	NA	NA	110816716	110841239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835590_110836578_110837654_110837731_110840171
ES.8480.12	chr12	+	1701	3	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	4	2912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCTTGTAGTTATAAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	110816716	110824656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110824109
ES.8480.14	chr12	+	3995	3	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	4	43575	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	1171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAATAAGCCCACTTGG	NA	False	NA	NA	False	NA	NA	NA	110816716	110880005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110820363_110864276_110864486_110879865
ES.8480.15	chr12	+	2912	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	4	-384	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	20.5634905319389	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGCTTTTTTCTAAG	NA	False	NA	NA	False	TATAAA	-16	NA	110816716	110836046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835512_110835706
ES.8480.17	chr12	+	3106	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-20	-701	7	-382	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCTTTTTTCTAAGAA	NA	False	NA	NA	False	TATAAA	-18	NA	110816719	110836048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ES.8480.19	chr12	+	3438	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.5634905319389	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGCTTTCTTGATGT	NA	False	NA	11	True	AGTAAA	-14	NA	110816726	110836428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835592
ES.8480.2	chr12	+	3124	9	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	0	4808	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	21.2658029474553	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAACCAAACTGA	NA	False	NA	NA	False	NA	NA	NA	110816712	110841238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110834917_110837654_110837731_110840171
ES.8480.20	chr12	+	3031	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	-10	4808	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	14.6524358913807	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAACCAAACTGA	NA	False	NA	NA	False	NA	NA	NA	110816729	110841238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110834917_110840171
ES.8480.21	chr12	+	3315	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.4101056547932	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTTGCTTTCTTGAT	NA	False	NA	9	True	AGTAAA	-12	NA	110816729	110836426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816878_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835590
ES.8480.22	chr12	+	2965	6	NIC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	-10	-384	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	19.8232187093822	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGCTTTTTTCTAAG	NA	False	NA	NA	False	TATAAA	-16	NA	110816729	110836046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583
ES.8480.25	chr12	+	3271	9	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	3	-383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	23.3117459663578	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTTTTTTCTAAGA	NA	False	NA	NA	False	TATAAA	-17	NA	110816742	110836047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835590
ES.8480.26	chr12	+	2965	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	3	4808	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	24.7204781672266	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAACCAAACTGA	NA	False	NA	NA	False	NA	NA	NA	110816742	110841238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583_110834917_110837654_110837731_110840171
ES.8480.28	chr12	+	3336	6	NIC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	5	2	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	19.8232187093822	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTCTTGATGTGTGT	NA	False	NA	15	True	AGTAAA	-18	NA	110816744	110836432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583
ES.8480.3	chr12	+	3682	9	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	0	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	23.3117459663578	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTTGCTTTCTTGAT	NA	False	NA	9	True	AGTAAA	-12	NA	110816712	110836426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835588
ES.8480.33	chr12	+	3142	8	FSM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	197	384	170	-384	multi-exon	FALSE	canonical	3	8	junction_3	20.4500386706884	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGCTTTTTTCTAAG	NA	False	NA	NA	False	TATAAA	-16	NA	110816909	110836046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ES.8480.34	chr12	+	4862	10	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	4871	4809	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	24.8417211785156	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAACCAAACTGAG	NA	False	NA	NA	False	NA	NA	NA	110821610	110841239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835554_110835590_110835699_110838780_110840454_110840542
ES.8480.35	chr12	+	2710	6	NIC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	5291	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	24.7030362506312	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGCTTTCTTGATGT	NA	False	NA	11	True	AGTAAA	-14	NA	110822030	110836428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110833141_110833260_110834583
ES.8480.36	chr12	+	172	2	Intergenic	novelGene_7004	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	110826713	110829292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110826722_110829128
ES.8480.37	chr12	+	174	1	Intergenic	novelGene_7005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	110829118	110829292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110829100_110829300
ES.8480.38	chr12	+	2129	4	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	16001	5357	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	21.2341444115106	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTAAGTGTTGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	110832740	110841787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110832803_110833141_110833260_110834583_110834917_110840171
ES.8480.39	chr12	+	3592	3	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	18445	4824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTGGGTGGTGATGGC	NA	False	NA	NA	False	NA	NA	NA	110835184	110841254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110835552_110835588_110837731_110840171
ES.8480.40	chr12	+	3392	2	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	18666	4808	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAACCAAACTGA	NA	False	NA	NA	False	NA	NA	NA	110835405	110841238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110837731_110840171
ES.8480.41	chr12	+	4753	1	Antisense	novelGene_ENSMUSG00000021276.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCTCACACCATAGAG	NA	False	NA	NA	False	NA	NA	NA	110840366	110845119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_110840400_110845100
ES.8480.42	chr12	+	4586	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	-22	3214	-22	-2281	multi-exon	FALSE	canonical	3	17	junction_1	4.72278616298412	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGTTCTCGGAACTGTT	5361	False	NA	NA	False	NA	NA	NA	110855675	110935614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.43	chr12	+	4622	21	NNC	ENSMUSG00000021275.17	novel	7780	21	NA	NA	-18	-2283	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.02433797892387	1076	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCACGTTCTCGGAACTG	5365	False	NA	NA	False	NA	NA	NA	110855679	110935612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110858202_110858245_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.44	chr12	+	6594	18	NIC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	-7	9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	7.84053878524343	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGTATTAACAGTAT	5376	False	NA	24	True	NA	NA	NA	110855690	110938837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.45	chr12	+	7790	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	-6	-6	-6	6	multi-exon	FALSE	canonical	3	17	junction_1	4.72278616298412	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTGCAGTATTAACAG	5377	False	NA	21	True	NA	NA	NA	110855691	110938834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.46	chr12	+	6431	18	NIC	ENSMUSG00000021275.17	novel	7780	21	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	7.68587433932286	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCTTAATTTTGCAGT	5379	False	NA	13	True	NA	NA	NA	110855693	110938826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.47	chr12	+	7800	21	NNC	ENSMUSG00000021275.17	novel	7780	21	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.02433797892387	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATTCTCTTAATTT	5395	False	NA	7	True	NA	NA	NA	110855709	110938820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110858202_110858245_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.48	chr12	+	6347	18	NNC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.59490926153157	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAATTTTGCAGTAT	5397	False	NA	15	True	NA	NA	NA	110855711	110938828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892665_110892911_110895465_110895599_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.49	chr12	+	5207	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	35	2536	-13	-1603	multi-exon	FALSE	canonical	3	17	junction_1	4.72278616298412	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCTCACAAACTTAGAAG	5418	False	NA	NA	False	NA	NA	NA	110855732	110936292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.5	chr12	+	3501	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-25	-1091	2	8	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGATGTGTGTGGGGAT	NA	False	NA	21	True	AGTAAA	-24	NA	110816714	110836438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ES.8480.50	chr12	+	4213	15	ISM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	35	25312	-13	7403	5prime_fragment	FALSE	canonical	3	17	junction_1	4.84715359352101	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACACAAGTTTTAGCTA	5418	False	NA	NA	False	NA	NA	NA	110855732	110913516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755
ES.8480.51	chr12	+	7957	22	NNC	ENSMUSG00000021275.17	novel	7780	21	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	10.55425460416	1096	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATTCTCTTAATTT	5419	False	NA	7	True	NA	NA	NA	110855733	110938820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110858202_110858245_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110896130_110896205_110897726_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.52	chr12	+	4187	18	NNC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	-12	15364	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.38807853990981	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATGAACATTATTTTT	5419	False	NA	NA	False	AATAAA	-18	NA	110855733	110921477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110858202_110858245_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107
ES.8480.53	chr12	+	3904	16	NNC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	-12	-12212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	9.8174447908925	1067	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTTTTGTATATTATT	5419	False	NA	NA	False	NA	NA	NA	110855733	110925683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110924354
ES.8480.54	chr12	+	3674	6	NNC	ENSMUSG00000021275.17	novel	4194	11	NA	NA	-12	-3984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.16515138991168	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAAGAA	5419	False	NA	NA	False	NA	NA	NA	110855733	110888685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110887466_110887750
ES.8480.55	chr12	+	7415	19	NIC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	-10	-3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8.70025542409213	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATTCTCTTAATTTTGC	5421	False	NA	10	True	NA	NA	NA	110855735	110938823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110855761_110881083_110881213_110881780_110881913_110885302_110885461_110892629_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.56	chr12	+	4985	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	-4493	-54	-4493	54	mono-exon	FALSE	NA	NA	NA	NA	NA	1037	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAGGAAAATCTAG	9740	False	NA	NA	False	AATAAA	-31	NA	110860054	110865039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110860100_110865000
ES.8480.57	chr12	+	5754	19	ISM	ENSMUSG00000021275.17	ENSMUST00000169597.9	7780	21	6773	1961	612	-1030	3prime_fragment	FALSE	canonical	3	18	junction_2	4.34790995624959	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTAGCCTCAGTGCTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	110862518	110936865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.58	chr12	+	7717	19	ISM	ENSMUSG00000021275.17	ENSMUST00000169597.9	7780	21	6773	-2	612	0	3prime_fragment	FALSE	canonical	3	18	junction_2	4.34790995624959	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAATTTTGCAGTAT	NA	False	NA	15	True	NA	NA	NA	110862518	110938828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.59	chr12	+	10266	17	NIC	ENSMUSG00000021275.17	novel	7778	20	NA	NA	638	-6	intron_retention	FALSE	canonical	2	4	junction_4	7.03118055521262	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATTCTCTTAATTT	NA	False	NA	7	True	NA	NA	NA	110862544	110938820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892629_110892911_110895465_110895599_110897833_110900067_110902709_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.6	chr12	+	4393	8	FSM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	2	-672	2	672	multi-exon	FALSE	canonical	3	8	junction_3	20.4500386706884	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAACCAAACCAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	110816714	110837102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ES.8480.60	chr12	+	3240	2	NNC	ENSMUSG00000021275.17	novel	658	3	NA	NA	3676	-3984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110885160	110888685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110887466_110887750
ES.8480.61	chr12	+	6232	12	ISM	ENSMUSG00000021275.17	ENSMUST00000223210.2	6946	20	37141	-933	17563	0	3prime_fragment	FALSE	canonical	3	18	junction_6	4.23093682844367	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAATTTTGCAGTAT	968	False	NA	15	True	NA	NA	NA	110899047	110938828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.62	chr12	+	4531	7	ISM	ENSMUSG00000021275.17	ENSMUST00000223210.2	6946	20	49168	-928	29590	-3	3prime_fragment	FALSE	canonical	3	18	junction_1	4.81028989655394	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATTCTCTTAATTTTGC	NA	False	NA	10	True	NA	NA	NA	110911074	110938823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ES.8480.63	chr12	+	5276	1	Genic_Genomic	ENSMUSG00000021275.17	novel	NA	NA	NA	NA	52323	255	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCATAAAATTGGAAGT	NA	False	NA	NA	False	NA	NA	NA	110933807	110939083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_110933800_110939100
ES.8480.7	chr12	+	3459	8	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	20.5634905319389	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTTGATGTGTGTGG	NA	False	NA	17	True	AGTAAA	-20	NA	110816715	110836434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583_110835552_110835588
ES.8480.8	chr12	+	5026	6	NNC	ENSMUSG00000021271.6	novel	2385	7	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_5	24.2454119371068	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTTCTTGATGTG	NA	False	NA	12	True	AGTAAA	-15	NA	110816716	110836429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110833260_110834583_110835552_110835588
ES.8480.9	chr12	+	3325	7	NNC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	25.3930217885851	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTTTCTTGATGTGT	NA	False	NA	13	True	AGTAAA	-16	NA	110816716	110836430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583_110835552_110835588
ES.8481.1	chr12	-	880	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	-55	-495	-55	495	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	110825383	110824503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110824500_110825400
ES.8482.1	chr12	-	3950	6	NNC	ENSMUSG00000021276.11	novel	445	4	NA	NA	-6	11857	intron_retention	FALSE	canonical	0	0	junction_1	203.840722133729	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCATGCATTATAT	3389	False	NA	NA	False	AATAAA	-15	NA	110855539	110827186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110830510_110831385_110831544_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.10	chr12	-	1577	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.929096467052	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	3371	False	NA	-17	True	NA	NA	NA	110855557	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110840646_110840776_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.11	chr12	-	3649	1	NIC	ENSMUSG00000021276.11	novel	2029	5	NA	NA	527	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	1949	False	NA	-17	True	NA	NA	NA	110843251	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110839600_110843300
ES.8482.12	chr12	-	1527	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.354558513218	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	3391	False	NA	-17	True	NA	NA	NA	110855537	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110842578_110842678_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.13	chr12	-	1462	5	NNC	ENSMUSG00000021276.11	novel	2029	5	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	177.687225202039	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	3380	False	NA	-17	True	NA	NA	NA	110855548	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840587_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.14	chr12	-	4132	4	NIC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	4	-7	intron_retention	FALSE	canonical	3	237	junction_1	97.1333562113906	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	3401	False	NA	-17	True	NA	NA	NA	110855527	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110840564_110843274_110846249_110850323_110850493_110855499
ES.8482.15	chr12	-	1999	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	-387	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	201.929096467052	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAATATATATACATATTA	2962	False	NA	-19	True	NA	NA	NA	110855966	110839604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110840646_110840791_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.16	chr12	-	2724	1	NIC	ENSMUSG00000021276.11	novel	2029	5	NA	NA	966	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTACTTTTTTTTTTCTT	2388	False	NA	-1	True	TATAAA	-42	NA	110842812	110840088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_110840100_110842800
ES.8482.17	chr12	-	930	5	NNC	ENSMUSG00000021276.11	novel	2029	5	NA	NA	-4	-37	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.437328352105	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGAGTTTCCCATTTCT	3391	False	NA	-31	True	TATAAA	-12	NA	110855537	110840118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840587_110843274_110843405_110846118_110846249_110850323_110850488_110855499
ES.8482.18	chr12	-	720	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	13	-10	-4	4	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGTTAATCTGCTTGC	3391	False	NA	-9	True	AATAAA	-18	NA	110855537	110841457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.19	chr12	-	655	5	NNC	ENSMUSG00000021276.11	novel	723	5	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	181.903820740522	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAACTTTGTAGGAGG	3361	False	NA	-22	True	AATAAA	-5	NA	110855567	110841470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110841629_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.2	chr12	-	3473	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	12	-1456	0	1456	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTGAGAACTTGGGC	3361	False	NA	NA	False	AATAAA	-18	NA	110855567	110837587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.20	chr12	-	1940	4	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	-53	0	intron_retention	FALSE	canonical	3	5	junction_1	206.236649399556	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3296	False	NA	-3	True	AATAAA	-18	NA	110855632	110844028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110844549_110845130_110846249_110850323_110850493_110855499
ES.8482.22	chr12	-	1235	5	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	211.668815605889	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3356	False	NA	-3	True	AATAAA	-18	NA	110855572	110844028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110844549_110845130_110845474_110846118_110846249_110850323_110850493_110855499
ES.8482.23	chr12	-	2447	3	FSM	ENSMUSG00000021276.11	ENSMUST00000220631.2	1356	3	10	-1101	1	0	multi-exon	FALSE	canonical	3	430	junction_1	12	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3371	False	NA	-3	True	AATAAA	-18	NA	110855557	110844028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110846249_110850323_110850493_110855499
ES.8482.24	chr12	-	808	5	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	213.008802635008	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3371	False	NA	-3	True	AATAAA	-18	NA	110855557	110844028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110844428_110845421_110845474_110846118_110846249_110850323_110850493_110855499
ES.8482.25	chr12	-	756	4	NNC	ENSMUSG00000021276.11	novel	744	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.591040608705	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTAGTTATTTCTGT	3371	False	NA	-3	True	AATAAA	-18	NA	110855557	110844028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110844428_110846118_110846249_110850323_110850493_110855499
ES.8482.26	chr12	-	1801	4	FSM	ENSMUSG00000021276.11	ENSMUST00000223407.2	702	4	1	-1100	1	-1	multi-exon	FALSE	canonical	3	34	junction_1	192.582449875372	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTCCTAGTTATTTCTG	3371	False	NA	-4	True	AATAAA	-17	NA	110855557	110844029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110845474_110846118_110846249_110850323_110850493_110855499
ES.8482.27	chr12	-	1989	5	NNC	ENSMUSG00000021276.11	novel	445	4	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_2	195.155066549654	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAACTCCTAGTTATT	3375	False	NA	-8	True	AATAAA	-13	NA	110855553	110844033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110844549_110845130_110846249_110849847_110849981_110850323_110850493_110855499
ES.8482.28	chr12	-	631	4	FSM	ENSMUSG00000021276.11	ENSMUST00000223407.2	702	4	21	50	-4	-50	multi-exon	FALSE	canonical	3	34	junction_1	192.582449875372	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGTGTGATGTGTTAC	3391	False	NA	-52	True	NA	NA	NA	110855537	110845179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110845474_110846118_110846249_110850323_110850493_110855499
ES.8482.29	chr12	-	550	4	FSM	ENSMUSG00000021276.11	ENSMUST00000223407.2	702	4	-9	161	0	-161	multi-exon	FALSE	canonical	3	34	junction_1	192.582449875372	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAGGGTTGGAAGCCAA	3361	False	NA	NA	False	AATAAA	-29	NA	110855567	110845290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110845474_110846118_110846249_110850323_110850493_110855499
ES.8482.3	chr12	-	1996	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	22	11	1	-11	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGCTTCCGGTTTTTCC	3371	False	NA	NA	False	TATAAA	-18	NA	110855557	110839054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.4	chr12	-	3646	5	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	-27	10	intron_retention	FALSE	canonical	3	5	junction_2	180.444589833001	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGTTGAGTTAACTGA	3322	False	NA	0	True	NA	NA	NA	110855606	110839585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110843274_110844549_110845130_110846249_110850323_110850493_110855499
ES.8482.5	chr12	-	1605	6	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	-4	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197.917558594481	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGTTGAGTTAACTGA	3391	False	NA	0	True	NA	NA	NA	110855537	110839585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110843274_110843405_110844267_110844428_110846118_110846249_110850323_110850493_110855499
ES.8482.6	chr12	-	1271	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221182.2	774	4	-8	-489	-6	3	multi-exon	FALSE	canonical	1	1	junction_3	143.292242171957	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTAATCCTGTTGAGT	3389	False	NA	-7	True	NA	NA	NA	110855539	110839592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110855499
ES.8482.7	chr12	-	1841	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	-363	551	-363	1	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATATTAATCCTGTTGA	2986	False	NA	-9	True	NA	NA	NA	110855942	110839594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ES.8482.8	chr12	-	1809	4	NNC	ENSMUSG00000021276.11	novel	774	4	NA	NA	-11971	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATACATATTAATCCTG	NA	False	NA	-13	True	NA	NA	NA	110867550	110839598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110840564_110840646_110841327_110842138_110842218_110867465
ES.8482.9	chr12	-	1328	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221102.2	536	4	-14	-778	0	-7	multi-exon	FALSE	canonical	2	10	junction_1	203.882318997995	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATACATATTAAT	3361	False	NA	-17	True	NA	NA	NA	110855567	110839602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110840564_110846118_110846249_110850323_110850493_110855499
ES.8483.1	chr12	-	3880	1	Antisense	novelGene_ENSMUSG00000021275.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	GATAAA	-13	NA	110924418	110920538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_110920500_110924400
ES.8484.1	chr12	-	4588	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	18	-2029	-1	2029	multi-exon	FALSE	canonical	3	78	junction_1	17	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGCTTGATGAGTTAT	NA	False	NA	NA	False	TATAAA	-32	NA	110945456	110939757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110943983_110944381_110944562_110945273
ES.8484.2	chr12	-	2603	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	-8	-18	-8	18	multi-exon	FALSE	canonical	3	78	junction_1	17	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGTTTCCCTTCTGCTG	NA	False	NA	NA	False	AAAAAG	-40	NA	110945482	110941768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110943983_110944381_110944562_110945273
ES.8484.3	chr12	-	1954	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	30	-278	4	277	multi-exon	FALSE	canonical	3	51	junction_1	30.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGTCCAGCAGAGCT	NA	False	NA	NA	False	CATAAA	-19	NA	110945425	110942582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110944205_110944381_110944562_110945273
ES.8484.4	chr12	-	1566	4	NNC	ENSMUSG00000037904.15	novel	1563	4	NA	NA	24	6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	38.9386982604994	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCTGGTCTGTTGCAT	NA	False	NA	0	True	NA	NA	NA	110945405	110942853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_110943983_110944079_110944205_110944381_110944562_110945273
ES.8484.5	chr12	-	1504	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	4	1069	4	4	multi-exon	FALSE	canonical	3	78	junction_1	17	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTGCCTGGTCTGTTGC	NA	False	NA	-2	True	NA	NA	NA	110945470	110942855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110943983_110944381_110944562_110945273
ES.8484.6	chr12	-	1738	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	-33	1	-14	-1	multi-exon	FALSE	canonical	3	51	junction_1	30.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGGATCTGCCTGGTC	NA	False	NA	-8	True	NA	NA	NA	110945488	110942861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110944205_110944381_110944562_110945273
ES.8484.7	chr12	-	1563	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	1	-1	1	-1	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGGATCTGCCTGGTC	NA	False	NA	-8	True	NA	NA	NA	110945428	110942861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
ES.8485.1	chr12	+	2503	1	Intergenic	novelGene_7006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTACCTTGCCTGTATC	NA	False	NA	NA	False	NA	NA	NA	110945685	110948188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110945700_110948200
ES.8486.1	chr12	+	177	1	Intergenic	novelGene_7007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGCTACATTCCT	NA	False	NA	NA	False	NA	NA	NA	110969875	110970052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_110969900_110970100
ES.8487.1	chr12	-	173	1	Intergenic	novelGene_7008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	110998740	110998567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_110998600_110998700
ES.8488.1	chr12	+	6205	15	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-3945	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.1751691451488	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTATGTCCCGTCTTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	111001839	111082339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111001897_111003028_111003107_111004131_111004233_111005503_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.10	chr12	+	7513	11	ISM	ENSMUSG00000037896.18	ENSMUST00000084968.14	5684	12	26	8	26	-8	intron_retention	FALSE	canonical	3	71	junction_1	10.2708324881676	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGTAATGCATCGCTATG	NA	False	NA	NA	False	AATAAA	-40	NA	111005810	111082327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214
ES.8488.11	chr12	+	5044	13	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	31	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.3901847788988	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAACGTAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	111005815	111082319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307_111078405_111078997
ES.8488.12	chr12	+	5284	10	NIC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-200	-16	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.7225738376503	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAACGTAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	111006031	111082319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111006323_111006395_111006456_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.13	chr12	+	6675	1	NIC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	69426	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCATCGCTATGTCCCG	7755	False	NA	NA	False	AATAAA	-45	NA	111075657	111082332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111075700_111082300
ES.8488.2	chr12	+	3286	12	FSM	ENSMUSG00000037896.18	ENSMUST00000116388.4	2720	12	-465	-101	-18	101	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCACCTTCCCCCCTCCC	NA	False	NA	NA	False	ATTAAA	-19	NA	111005766	111079919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.3	chr12	+	5652	12	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-10	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	27.6202105903965	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATGTAATAAAATACGA	NA	False	NA	NA	False	AATAAA	-13	NA	111005774	111082300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076221_111076445_111078307
ES.8488.4	chr12	+	5086	13	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-6	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	27.3901847788988	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCATCGCTATGTCCC	NA	False	NA	NA	False	AATAAA	-44	NA	111005778	111082331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307_111078398_111078997
ES.8488.5	chr12	+	5605	11	NIC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.876579456156	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCGCTATGTCCCGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	111005779	111082335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111006323_111006395_111006456_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.6	chr12	+	3015	12	FSM	ENSMUSG00000037896.18	ENSMUST00000116388.4	2720	12	-450	155	-3	-155	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCACTTTTGCTCTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	111005781	111079663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.7	chr12	+	3155	12	FSM	ENSMUSG00000037896.18	ENSMUST00000116388.4	2720	12	-435	0	12	0	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111005796	111079818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.8	chr12	+	5056	7	NIC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	36.7589747166896	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATCGCTATGTCCCGT	NA	False	NA	NA	False	AATAAA	-20	NA	111005802	111082333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111006323_111006395_111006456_111048157_111048242_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8488.9	chr12	+	4205	12	NNC	ENSMUSG00000037896.18	novel	5684	12	NA	NA	18	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.5060527138065	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCTACATCTGCCTTAAT	NA	False	NA	NA	False	AAAAAG	-18	NA	111005802	111078488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111006323_111006395_111006456_111048157_111048242_111057128_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ES.8489.1	chr12	-	198	1	Intergenic	novelGene_7009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAGACATGTGC	NA	False	NA	NA	False	NA	NA	NA	111029287	111029089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111029100_111029300
ES.849.1	chr1	+	168	1	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATATTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	80602769	80602937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_80602800_80602900
ES.8490.1	chr12	-	161	1	Intergenic	novelGene_7010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	111036575	111036414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111036400_111036600
ES.8491.1	chr12	-	175	1	Intergenic	novelGene_7011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGGGAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	111037359	111037184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111037200_111037400
ES.8492.1	chr12	-	185	1	Intergenic	novelGene_7012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATTATACTAAA	NA	False	NA	NA	False	NA	NA	NA	111043856	111043671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111043700_111043900
ES.8493.1	chr12	-	402	1	Intergenic	novelGene_7013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAATCTAATA	NA	False	NA	NA	False	NA	NA	NA	111105026	111104624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111104600_111105000
ES.8494.1	chr12	+	182	1	Intergenic	novelGene_7014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	111108761	111108943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111108800_111108900
ES.8494.2	chr12	+	173	2	Intergenic	novelGene_7015	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	111108761	111109159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111108876_111109100
ES.8495.1	chr12	+	7214	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-147	-7	-54	2	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTGTGGTCTGTTC	NA	False	NA	16	True	AATAAA	-20	NA	111132749	111233589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.10	chr12	+	2360	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-34	-255	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAAGGTTTTCATTTT	NA	False	NA	NA	False	GATAAA	-9	NA	111132862	111228739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.12	chr12	+	2506	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-33	4587	-33	1	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCTCTGTTTTAATA	NA	False	NA	19	True	AATATA	-26	NA	111132863	111228995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.13	chr12	+	7105	12	NNC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	17.1839825476619	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGCTCTCTGGCTGTGG	NA	False	NA	9	True	AATAAA	-13	NA	111132864	111233582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221643_111221798_111227070_111227246_111227922
ES.8495.14	chr12	+	7302	14	NNC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.8372072857902	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTGTGGTCTGTTC	NA	False	NA	16	True	AATAAA	-20	NA	111132884	111233589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111133037_111133432_111133542_111181758_111181873_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.15	chr12	+	2877	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-2	4185	-2	403	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTCTGCCCCATGTTTA	NA	False	NA	NA	False	NA	NA	NA	111132894	111229397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.16	chr12	+	5530	1	Intergenic	novelGene_7017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAGAAAGAAAAA	4646	False	NA	NA	False	AATAGA	-17	NA	111156664	111162194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111156700_111162200
ES.8495.17	chr12	+	5199	1	Intergenic	novelGene_7018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACTTAATT	9874	False	NA	NA	False	NA	NA	NA	111176415	111181614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111176400_111181600
ES.8495.18	chr12	+	4182	1	NIC	ENSMUSG00000021277.17	novel	6972	10	NA	NA	987	-8909	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111215903	111220085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111215900_111220100
ES.8495.2	chr12	+	7283	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGGCTGTGGTCTGT	NA	False	NA	14	True	AATAAA	-18	NA	111132787	111233587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.3	chr12	+	2676	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-9	-7	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTCATCTGGTCTCTG	NA	False	NA	11	True	AATATA	-18	NA	111132794	111228987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.4	chr12	+	2139	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-7	-542	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGTCATAGTGGATAC	NA	False	NA	NA	False	ATTAAA	-16	NA	111132796	111228452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.5	chr12	+	7184	14	NNC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.8082821993382	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCTCTGGCTGTGGTCT	NA	False	NA	12	True	AATAAA	-16	NA	111132800	111233585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111132840_111132923_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.6	chr12	+	3561	8	ISM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-91	13465	2	-8877	intron_retention	FALSE	canonical	3	25	junction_1	11.7594946441467	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGATAAAGGATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111132805	111220117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563
ES.8495.7	chr12	+	7307	13	NNC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	41	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.755596080116	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGGCTCTCTGGCTGTG	NA	False	NA	8	True	AATAAA	-12	NA	111132844	111233581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111133037_111133432_111133629_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.8	chr12	+	2274	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-51	4837	42	-249	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCATTTTCATTTT	NA	False	NA	NA	False	GATAAA	-15	NA	111132845	111228745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8495.9	chr12	+	1976	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	-43	5127	-43	-539	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCATAGTGGATACCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	111132853	111228455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ES.8496.1	chr12	-	171	1	Intergenic	novelGene_7016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCAGTCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	111146897	111146726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111146700_111146900
ES.8497.1	chr12	-	189	1	Intergenic	novelGene_7019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGACAAGTGACTGA	NA	False	NA	NA	False	NA	NA	NA	111207569	111207380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111207400_111207600
ES.8498.1	chr12	-	4552	1	Antisense	novelGene_ENSMUSG00000021277.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGGGATGTAATCCTG	NA	False	NA	NA	False	NA	NA	NA	111216731	111212179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_111212200_111216700
ES.8499.1	chr12	+	1692	12	NNC	ENSMUSG00000021278.8	novel	1024	7	NA	NA	-302	6	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	8.49696105130758	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCTGGTCCTACTTGTA	NA	False	NA	34	True	AATAAA	-27	NA	111237226	111242692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111237456_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ES.8499.2	chr12	+	1675	11	NIC	ENSMUSG00000021278.8	novel	1701	12	NA	NA	-16	4	intron_retention	FALSE	canonical	3	12	junction_1	7.59012516365837	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGCCTGGTCCTACTTG	NA	False	NA	32	True	AATAAA	-25	NA	111237512	111242690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ES.8499.3	chr12	+	1543	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	-10	168	-10	6	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCTGGTCCTACTTGTA	NA	False	NA	34	True	AATAAA	-27	NA	111237518	111242692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ES.8499.4	chr12	+	1617	11	ISM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	447	169	447	5	3prime_fragment	FALSE	canonical	3	18	junction_4	6.39061812346818	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCTGGTCCTACTTGT	NA	False	NA	33	True	AATAAA	-26	NA	111237975	111242691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ES.8499.5	chr12	+	1859	2	NIC	ENSMUSG00000021278.8	novel	1024	7	NA	NA	-209	0	intron_retention	FALSE	canonical	3	35	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATAGCCTGGTCCTA	NA	False	NA	28	True	AATAAA	-21	NA	111240738	111242686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111242361_111242449
ES.85.1	chr1	-	7040	4	Antisense	novelGene_ENSMUSG00000056763.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGCCATTCTCAAGAA	6161	False	NA	NA	False	TATAAA	-43	NA	10156074	10142832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_10143373_10143410_10147467_10152476_10152571_10153724
ES.85.2	chr1	-	2748	7	Antisense	novelGene_ENSMUSG00000056763.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGCCATTCTCAAGAA	3935	False	NA	NA	False	TATAAA	-43	NA	10158300	10142832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_10143368_10143406_10145170_10147394_10147467_10152476_10152572_10153726_10153783_10155970_10156179_10158281
ES.85.3	chr1	-	2757	7	Antisense	novelGene_ENSMUSG00000056763.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGCCATTCTCAAGAA	3933	False	NA	NA	False	TATAAA	-43	NA	10158302	10142832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_10143373_10143410_10145170_10147394_10147467_10152476_10152571_10153724_10153783_10155970_10156176_10158273
ES.85.4	chr1	-	4519	2	Antisense	novelGene_ENSMUSG00000056763.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	6161	False	NA	NA	False	NA	NA	NA	10156074	10150401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_10152571_10153724
ES.850.1	chr1	-	7274	56	FSM	ENSMUSG00000038608.16	ENSMUST00000077946.12	7198	56	-79	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_2	0.947201183827717	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGATTTCCTTTGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	80736244	80478792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_80479544_80483041_80483181_80483337_80483439_80487993_80488185_80490143_80490355_80493205_80493353_80501432_80501547_80501686_80501810_80503940_80504048_80505949_80506049_80506365_80506424_80507794_80508011_80508890_80509002_80510038_80510222_80511502_80511641_80513569_80513683_80514561_80514687_80516499_80516602_80517526_80517575_80517801_80517869_80517960_80518076_80518173_80518296_80518944_80519057_80520816_80520934_80521057_80521234_80526849_80526895_80527422_80527520_80529171_80529256_80530394_80530542_80536883_80536956_80538617_80538732_80542218_80542289_80544444_80544564_80545008_80545102_80545712_80545800_80546154_80546277_80546463_80546588_80550173_80550267_80551196_80551263_80551796_80551985_80553575_80553656_80556302_80556426_80562712_80562796_80564045_80564169_80564365_80564588_80570233_80570390_80570489_80570574_80570875_80570962_80573257_80573442_80583507_80583643_80583881_80584005_80584269_80584343_80593008_80593092_80611916_80612007_80625929_80626050_80736042
ES.8500.1	chr12	+	203	1	Intergenic	novelGene_7020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111244378	111244581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111244400_111244600
ES.8501.1	chr12	+	178	1	Intergenic	novelGene_7021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	111244604	111244782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111244600_111244800
ES.8502.1	chr12	+	176	1	Intergenic	novelGene_7022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATATATATATA	273	False	NA	NA	False	NA	NA	NA	111274979	111275155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111275000_111275200
ES.8503.1	chr12	+	1312	1	Intergenic	novelGene_7024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAACCTCTTACA	NA	False	NA	NA	False	NA	NA	NA	111334967	111336279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111335000_111336300
ES.8504.10	chr12	-	4371	6	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-2143	0	intron_retention	FALSE	canonical	3	140	junction_2	9.74884608556315	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	8179	False	NA	-3	True	AATAAA	-25	NA	111264852	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111260667_111261327_111261399_111261489_111262291_111262381_111262500_111262642_111262728_111262813
ES.8504.11	chr12	-	6775	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-20	0	intron_retention	FALSE	canonical	3	7	junction_17	25.2420993629079	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344073	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.14	chr12	-	6507	38	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-30	0	intron_retention	TRUE	non_canonical	0	0	junction_32	33.0867774639819	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344083	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295665_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530_111343890_111344025
ES.8504.16	chr12	-	8884	36	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	336	0	intron_retention	TRUE	canonical	3	105	junction_27	14.9203600109764	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111343717	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.18	chr12	-	7199	36	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-30	0	intron_retention	FALSE	canonical	3	105	junction_27	14.9203600109764	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344083	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.19	chr12	-	6430	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	175	0	intron_retention	FALSE	canonical	0	0	junction_16	32.7654755632951	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111343878	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111278070_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.20	chr12	-	4291	3	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-1225	0	intron_retention	FALSE	canonical	3	143	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	9097	False	NA	-3	True	AATAAA	-25	NA	111263934	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111262291_111262381_111262500_111262642
ES.8504.21	chr12	-	5419	4	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-2444	0	intron_retention	FALSE	canonical	3	140	junction_1	1.4142135623731	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	7878	False	NA	-3	True	AATAAA	-25	NA	111265153	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111261399_111261489_111262291_111262381_111262500_111262642
ES.8504.22	chr12	-	8415	36	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-49	-1	intron_retention	FALSE	canonical	0	0	junction_4	33.7455545069212	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGGTTTGTCTGATA	NA	False	NA	-4	True	AATAAA	-24	NA	111344102	111259410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262387_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270344_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.23	chr12	-	6521	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	8	-1	intron_retention	FALSE	canonical	0	0	junction_7	26.047499346813	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGGTTTGTCTGATA	NA	False	NA	-4	True	AATAAA	-24	NA	111344144	111259410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265700_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.24	chr12	-	6953	21	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-4186	-1	intron_retention	FALSE	canonical	3	7	junction_16	31.9043492332942	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGGTTTGTCTGATA	NA	False	NA	-4	True	AATAAA	-24	NA	111285157	111259410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869
ES.8504.25	chr12	-	7751	34	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-27565	-2	intron_retention	FALSE	canonical	3	105	junction_27	15.3096595302159	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGGGGTTTGTCTGAT	NA	False	NA	-5	True	AATAAA	-23	NA	111308536	111259411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459
ES.8504.26	chr12	-	6599	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_10	25.9667997904637	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGGGGTTTGTCTGAT	NA	False	NA	-5	True	AATAAA	-23	NA	111344058	111259411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268646_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.27	chr12	-	7160	36	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-21	-2	intron_retention	FALSE	canonical	1	5	junction_20	25.715079352832	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGGGGTTTGTCTGAT	NA	False	NA	-5	True	AATAAA	-23	NA	111344074	111259411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284439_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.28	chr12	-	5415	32	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-12940	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.2765497686438	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGGGGTTTGTCTGAT	NA	False	NA	-5	True	AATAAA	-23	NA	111293911	111259411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111265662_111265822_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849
ES.8504.29	chr12	-	6566	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	33.4310027436277	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGGGGTTTGTCTGAT	NA	False	NA	-5	True	AATAAA	-23	NA	111344171	111259411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270344_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343693
ES.8504.31	chr12	-	4094	2	NIC	ENSMUSG00000021279.6	novel	802	5	NA	NA	-945	-8	intron_retention	FALSE	canonical	3	143	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGTTCTCAGGGGTTTG	9377	False	NA	-11	True	AATAAA	-17	NA	111263654	111259417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111262500_111262642
ES.8504.33	chr12	-	6703	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-35	-12	intron_retention	FALSE	canonical	0	0	junction_31	26.1353315562584	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAAAGTTCTCAGGGG	NA	False	NA	-15	True	AATAAA	-13	NA	111344088	111259421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294116_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.34	chr12	-	3127	12	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-1	-12	intron_retention	FALSE	non_canonical	0	0	junction_1	36.2261035513398	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAAAGTTCTCAGGGG	NA	False	NA	-15	True	AATAAA	-13	NA	111344153	111259421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260659_111289301_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.35	chr12	-	6633	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	48	-12	intron_retention	FALSE	canonical	0	0	junction_3	26.0648970461172	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAAAGTTCTCAGGGG	NA	False	NA	-15	True	AATAAA	-13	NA	111344104	111259421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262193_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.36	chr12	-	4903	23	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-6575	-230	intron_retention	FALSE	canonical	3	7	junction_15	30.41965436853	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTTTTGTGCCACATTG	NA	False	NA	NA	False	GATAAA	-19	NA	111287546	111260393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397
ES.8504.38	chr12	-	5609	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	115	990	16	-236	multi-exon	FALSE	canonical	3	105	junction_28	14.8707393524629	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGACCAGTTTTGTGCC	NA	False	NA	NA	False	GATAAA	-13	NA	111344037	111260399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.39	chr12	-	4668	30	ISM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	241	6059	142	105	5prime_fragment	FALSE	canonical	3	105	junction_21	13.4837727813305	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGCCGGCATGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	111343911	111265468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.40	chr12	-	4613	26	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	153	-3250	intron_retention	FALSE	canonical	0	0	junction_1	27.7499117115713	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGAGGGTCTCTATTG	NA	False	NA	NA	False	AATAAA	-32	NA	111343900	111269239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111270346_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.41	chr12	-	1346	12	ISM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	59186	10793	-3995	-4213	internal_fragment	FALSE	canonical	3	110	junction_9	14.3860584485797	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGACAGTAATTCTTAAA	NA	False	NA	NA	False	AGTAAA	-11	NA	111284966	111270202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869
ES.8504.42	chr12	-	157	1	Intergenic	novelGene_7023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	111318441	111318284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111318300_111318400
ES.8504.43	chr12	-	5258	1	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-2	-32543	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAACAGCATAACCAAGT	NA	False	NA	NA	False	NA	NA	NA	111344055	111338797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111338800_111344100
ES.8504.44	chr12	-	5106	1	NIC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-44	-32737	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTTTAAAAATCAAAACAG	NA	False	NA	NA	False	NA	NA	NA	111344097	111338991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111339000_111344100
ES.8504.8	chr12	-	6602	37	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-4	0	intron_retention	FALSE	non_canonical	0	0	junction_32	26.1325414420837	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344057	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302476_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8504.9	chr12	-	7311	36	NNC	ENSMUSG00000021279.6	novel	6714	37	NA	NA	-2	0	intron_retention	FALSE	canonical	3	7	junction_16	25.4517711183569	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344055	111259409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278141_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ES.8505.1	chr12	+	735	4	NNC	ENSMUSG00000087075.3	novel	670	4	NA	NA	-4782	-31	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	1.24721912892465	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTCGTGGGTACTTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	111368460	111378493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111368616_111374958_111375046_111376620_111376778_111378157
ES.8506.1	chr12	-	178	1	Intergenic	novelGene_7025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTCTAAAGTCATTA	NA	False	NA	NA	False	NA	NA	NA	111391488	111391310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111391300_111391500
ES.8507.1	chr12	+	3690	12	FSM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	71	1	71	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.24896670488236	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGAGTGGTTTATTTG	436	False	NA	NA	False	TATAAA	-17	NA	111408973	111421451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111409118_111411362_111411718_111411940_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ES.8508.1	chr12	+	178	1	Intergenic	novelGene_7026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACGTGTAAAGGGCT	739	False	NA	NA	False	NA	NA	NA	111438647	111438825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111438600_111438800
ES.8509.1	chr12	+	177	1	Intergenic	novelGene_7027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATATATACAAAGGG	2175	False	NA	NA	False	NA	NA	NA	111448203	111448380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111448200_111448400
ES.851.1	chr1	+	2514	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGGAAACTGAACAAC	NA	False	NA	NA	False	NA	NA	NA	80961828	80964342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_80961800_80964300
ES.8510.1	chr12	-	5071	1	FSM	ENSMUSG00000010529.7	ENSMUST00000010673.7	1215	1	401	-4257	401	4257	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTCTGTGAAATTATC	6792	False	NA	NA	False	NA	NA	NA	111451856	111446785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111446800_111451900
ES.8511.1	chr12	-	1221	5	NNC	ENSMUSG00000113029.2	novel	390	4	NA	NA	-4244	2261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTCTTTTGTCCAATT	NA	False	NA	NA	False	NA	NA	NA	111471518	111460785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111461609_111462279_111462332_111463009_111463159_111464694_111464792_111471418
ES.8511.2	chr12	-	1443	6	NNC	ENSMUSG00000113029.2	novel	390	4	NA	NA	-4226	2260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGTCTTTTGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	111471500	111460786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111461609_111462279_111462387_111463009_111463159_111464694_111464792_111469442_111469629_111471418
ES.8511.3	chr12	-	2080	1	Intergenic	novelGene_7028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCCTTCATCGCGTG	NA	False	NA	NA	False	NA	NA	NA	111471490	111469410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111469400_111471500
ES.8512.1	chr12	+	185	1	Intergenic	novelGene_7029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTCTTCTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	111488002	111488187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111488000_111488200
ES.8513.1	chr12	-	157	1	Intergenic	novelGene_7030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAATAAATAAACAAAAAT	7164	False	NA	NA	False	NA	NA	NA	111493679	111493522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111493500_111493700
ES.8514.10	chr12	+	3662	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-38	3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	672.963631696971	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504592	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111506923_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.100	chr12	+	2927	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-1	714	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGAGTCAGAGCCTGT	NA	False	NA	NA	False	TTTAAA	-18	NA	111504648	111512147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.101	chr12	+	3927	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-1	16	intron_retention	FALSE	canonical	3	24	junction_3	723.475101314636	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTAAAAAGTATGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	111504648	111513038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.102	chr12	+	4741	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-1	3	intron_retention	FALSE	canonical	3	24	junction_3	718.639678597224	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504648	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.104	chr12	+	1942	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	3	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTTGGGCTATGAATG	NA	False	NA	21	True	AATAAA	-22	NA	111504649	111511360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.105	chr12	+	4260	9	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1736	junction_1	212.646273186247	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTGGGCTATGA	NA	False	NA	18	True	AATAAA	-19	NA	111504649	111511357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.108	chr12	+	4833	10	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	715	intron_retention	FALSE	canonical	3	20	junction_3	729.764954549675	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTCAGAGCCTGTA	NA	False	NA	NA	False	TTTAAA	-19	NA	111504649	111512148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506346_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.109	chr12	+	4817	8	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	0	713	intron_retention	FALSE	canonical	3	1736	junction_1	225.248887288017	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111504649	111512146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.11	chr12	+	4082	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-38	710	intron_retention	FALSE	canonical	3	17	junction_6	769.146351076959	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504592	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.110	chr12	+	2172	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	201	1677	1	76	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAATGAAGTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	111504650	111511509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.112	chr12	+	3127	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	2	intron_retention	FALSE	canonical	3	1736	junction_1	208.679327506093	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTGGGCTATGAAT	NA	False	NA	20	True	AATAAA	-21	NA	111504651	111511359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.113	chr12	+	4040	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	2160	junction_6	97.3300354590973	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.114	chr12	+	4969	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	1736	junction_1	201.615696038004	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.115	chr12	+	5046	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	712	intron_retention	FALSE	canonical	3	1736	junction_1	212.646273186247	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504651	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.116	chr12	+	4122	8	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	2	-619	intron_retention	FALSE	canonical	3	17	junction_5	819.762310000868	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTGCATTCTGGGAG	NA	False	NA	NA	False	ATTAAA	-21	NA	111504651	111512403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.117	chr12	+	4865	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	48	intron_retention	FALSE	canonical	3	1736	junction_1	192.565027977564	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAAGCACTGAATGC	NA	False	NA	NA	False	ATTAAA	-23	NA	111504651	111513070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.119	chr12	+	2431	12	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	2	446	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	883.315177317439	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTGCACTTAATCT	NA	False	NA	NA	False	ATTAAA	-34	NA	111504651	111511879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.12	chr12	+	4126	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-36	-474	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCATACAAATATTTAG	NA	False	NA	NA	False	AATAAA	-22	NA	111504594	111512548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.121	chr12	+	5427	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	1736	junction_1	210.938972217085	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.122	chr12	+	1722	11	FSM	ENSMUSG00000021282.18	ENSMUST00000222388.2	3543	11	2	1819	2	4	multi-exon	FALSE	canonical	3	17	junction_8	924.275527102173	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504651	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.123	chr12	+	2926	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	2	619	2	-619	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTGCATTCTGGGAG	NA	False	NA	NA	False	ATTAAA	-21	NA	111504651	111512403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.124	chr12	+	3239	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-474	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCATACAAATATTTAG	NA	False	NA	NA	False	AATAAA	-22	NA	111504651	111512548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.125	chr12	+	4047	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	3	intron_retention	FALSE	canonical	3	1736	junction_1	204.078416301186	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504651	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.127	chr12	+	3100	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-613	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATTCTGGGAGTTAAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	111504651	111512409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.128	chr12	+	3516	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	682.549777193655	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504651	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508674_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.129	chr12	+	6031	5	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	713	intron_retention	FALSE	canonical	3	1736	junction_1	253.681394666617	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111504651	111512146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111508745_111509113_111510096_111510962
ES.8514.13	chr12	+	3997	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-36	712	intron_retention	FALSE	canonical	3	1736	junction_1	192.565027977564	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504594	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.131	chr12	+	6103	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	22	intron_retention	FALSE	canonical	3	1736	junction_1	225.59979012872	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTATGTTTTCATTT	NA	False	NA	NA	False	ATTAAA	-37	NA	111504651	111513044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.132	chr12	+	6711	6	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	2	3	intron_retention	FALSE	canonical	3	1736	junction_1	263.575719670838	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504651	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.134	chr12	+	5193	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	24	junction_3	785.101345336371	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.135	chr12	+	3878	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGGGGTTTTTTTTT	NA	False	NA	13	True	AAAACA	-19	NA	111504651	111513187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.136	chr12	+	2820	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	674.223164859424	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504651	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504773_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.137	chr12	+	3314	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-617	intron_retention	FALSE	canonical	3	1736	junction_1	199.252628589939	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATTCTGGGAGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	111504651	111512405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.138	chr12	+	3194	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	240	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGGAAGTTGTGGTT	NA	False	NA	NA	False	AGTAAA	-38	NA	111504651	111511673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.139	chr12	+	1834	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	202	2014	2	157	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGCTATTACTGTGAG	NA	False	NA	NA	False	NA	NA	NA	111504651	111511172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.14	chr12	+	4359	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-33	-6	intron_retention	FALSE	canonical	3	1736	junction_1	207.413167909422	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504597	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.140	chr12	+	2625	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	675.666600752102	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTGGGCTATGAAT	NA	False	NA	20	True	AATAAA	-21	NA	111504651	111511359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111505587_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.141	chr12	+	5216	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	1736	junction_1	211.550082722744	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.142	chr12	+	6446	6	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-6	intron_retention	FALSE	canonical	3	1736	junction_1	252.666895338507	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504651	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111508280_111508585_111508745_111509113_111509699_111509960_111510096_111510962
ES.8514.143	chr12	+	3717	13	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	74	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	653.911096573703	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATAGCTCATGCTTTG	NA	False	NA	-78	True	AGTAAA	-20	NA	111504651	111513096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962_111511473_111511513
ES.8514.145	chr12	+	3555	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	0	intron_retention	FALSE	canonical	3	1736	junction_1	211.550082722744	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGACTTTGGGCTAT	NA	False	NA	16	True	AATAAA	-17	NA	111504651	111511355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.146	chr12	+	5453	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-470	intron_retention	FALSE	canonical	3	1736	junction_1	212.646273186247	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATACAAATATTTAGTAAA	NA	False	NA	NA	False	AATAAA	-26	NA	111504651	111512552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.148	chr12	+	3339	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-458	intron_retention	FALSE	canonical	3	1736	junction_1	195.124806213869	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTAAAATTAGAACTTTA	NA	False	NA	NA	False	AATAAA	-38	NA	111504651	111512564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.149	chr12	+	4033	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	710	intron_retention	FALSE	canonical	3	1736	junction_1	205.262313355254	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504651	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.15	chr12	+	6557	7	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-33	-6	intron_retention	FALSE	canonical	3	1736	junction_1	239.007438284995	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504597	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.150	chr12	+	3517	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	5	intron_retention	FALSE	canonical	3	1736	junction_1	204.783994430717	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGGCTATGAATGGC	NA	False	NA	23	True	AATAAA	-24	NA	111504651	111511362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.151	chr12	+	4706	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCACTTGGGGTTTTTTT	NA	False	NA	11	True	AAAACA	-17	NA	111504651	111513185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.152	chr12	+	6648	7	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	2	79	intron_retention	FALSE	canonical	3	1736	junction_1	234.066051931216	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAAAATCATCCTTT	NA	False	NA	91	True	AATGAA	-33	NA	111504651	111513265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.153	chr12	+	2054	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	682.01583801682	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504653	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505808_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.154	chr12	+	3963	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	4	-6	intron_retention	FALSE	canonical	3	24	junction_3	731.42661210055	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504653	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.155	chr12	+	3054	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	4	489	4	-489	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTGTGCATTAAAAT	NA	False	NA	NA	False	AATAAA	-7	NA	111504653	111512533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.156	chr12	+	2800	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	4	711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	674.223164859424	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTCTGAGTCAGAGCC	NA	False	NA	NA	False	TTTAAA	-15	NA	111504653	111512144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504678_111504796_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.158	chr12	+	3731	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	6	75	intron_retention	FALSE	canonical	3	52	junction_1	691.087722362364	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATAGCTCATGCTTTGA	NA	False	NA	-77	True	AGTAAA	-21	NA	111504655	111513097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.159	chr12	+	4094	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	6	712	intron_retention	FALSE	canonical	3	1736	junction_1	201.615696038004	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504655	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.16	chr12	+	2088	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	149	1813	-32	16	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGGCTTATACTGAAG	NA	False	NA	34	True	AATAAA	-35	NA	111504598	111511373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.160	chr12	+	5155	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	6	712	intron_retention	FALSE	canonical	3	1736	junction_1	218.617548822278	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504655	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.161	chr12	+	5340	7	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	6	712	intron_retention	FALSE	canonical	3	24	junction_2	856.103073363379	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504655	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506563_111506737_111506894_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.162	chr12	+	5986	6	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	6	28	intron_retention	FALSE	canonical	3	1736	junction_1	251.865519672702	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCATTTTACTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	111504655	111513050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.163	chr12	+	4677	10	NNC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	6	-6	intron_retention	FALSE	canonical	0	0	junction_4	735.630811860151	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504655	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508110_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.164	chr12	+	3182	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	6	-613	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATTCTGGGAGTTAAAA	NA	False	NA	NA	False	ATTAAA	-27	NA	111504655	111512409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.165	chr12	+	5008	8	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	15	3	intron_retention	FALSE	canonical	3	2160	junction_4	94.2389494414954	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504664	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.166	chr12	+	2129	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	15	8	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCTATGAATGGCTTA	NA	False	NA	26	True	AATAAA	-27	NA	111504664	111511365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.167	chr12	+	5318	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	15	-6	intron_retention	FALSE	canonical	3	2160	junction_4	100.628636326741	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504664	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.168	chr12	+	2033	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	22	1	intron_retention	FALSE	canonical	3	24	junction_2	725.721981933666	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACTTTGGGCTATGAA	NA	False	NA	19	True	AATAAA	-20	NA	111504671	111511358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.169	chr12	+	2794	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	24	706	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	693.242930003617	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCATACTTCTGAGTCA	NA	False	NA	NA	False	TTTAAA	-10	NA	111504673	111512139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.17	chr12	+	3498	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	150	402	-31	-238	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGTCTTAGAGCT	NA	False	NA	NA	False	NA	NA	NA	111504599	111512784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.170	chr12	+	4275	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	27	710	intron_retention	FALSE	canonical	3	2160	junction_5	94.2297723652137	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504676	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.171	chr12	+	3762	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	27	70	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	725.721981933666	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTATAGCTCATGC	NA	False	NA	-82	True	ATTAAA	-45	NA	111504676	111513092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.172	chr12	+	5094	11	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	227	-1156	27	1156	3prime_fragment	FALSE	canonical	3	2160	junction_7	92.3556170462847	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTATTTTATGTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	111504676	111514342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.173	chr12	+	3263	11	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	284	618	-53	-454	3prime_fragment	FALSE	canonical	3	2160	junction_7	92.3556170462847	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTAGAACTTTAATAA	NA	False	NA	NA	False	AATAAA	-42	NA	111504733	111512568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.174	chr12	+	3733	11	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	291	141	-46	23	3prime_fragment	FALSE	canonical	3	2160	junction_7	92.3556170462847	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504740	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.175	chr12	+	2020	11	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-41	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	704.685241792391	1655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAGACTTTGGGCTA	NA	False	NA	15	True	AATAAA	-16	NA	111504745	111511354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510079_111510962
ES.8514.176	chr12	+	4928	9	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-8	28	intron_retention	FALSE	canonical	3	2284	junction_6	62.3873985673389	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCATTTTACTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	111504778	111513050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.178	chr12	+	4779	9	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	0	712	intron_retention	FALSE	canonical	3	2160	junction_5	84.1032661375288	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504786	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.179	chr12	+	3949	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	712	intron_retention	FALSE	canonical	3	20	junction_3	725.29626130752	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504786	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.18	chr12	+	2737	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	152	1161	-29	592	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGGATATAATAGCTTG	NA	False	NA	NA	False	NA	NA	NA	111504601	111512025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.181	chr12	+	5906	8	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	0	3	intron_retention	FALSE	canonical	3	2160	junction_4	89.8965391719951	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504786	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.182	chr12	+	3838	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	712	intron_retention	FALSE	canonical	3	24	junction_2	756.634643916732	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504786	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.183	chr12	+	3708	9	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	0	527	intron_retention	FALSE	canonical	3	2160	junction_5	91.6787018614465	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTATCTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	111504786	111511960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.184	chr12	+	4784	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	69	intron_retention	FALSE	canonical	3	24	junction_2	756.634643916732	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGATTATAGCTCATG	NA	False	NA	-83	True	ATTAAA	-44	NA	111504786	111513091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.185	chr12	+	745	6	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	457	5025	118	0	internal_fragment	FALSE	canonical	3	2198	junction_1	83.0204794011694	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111504906	111508161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139
ES.8514.186	chr12	+	5108	6	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-179	-3	intron_retention	FALSE	canonical	3	2160	junction_4	102.245586701823	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTTCAGACTTTGGGC	NA	False	NA	13	True	AATAAA	-14	NA	111505036	111511352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509699_111509960
ES.8514.187	chr12	+	4953	7	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	-130	0	intron_retention	FALSE	canonical	3	2284	junction_4	68.4462481724812	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111505085	111513022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.188	chr12	+	3641	11	NNC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-129	28	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	704.494066688996	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCATTTTACTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	111505086	111513050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111505232_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.189	chr12	+	3590	9	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-128	710	intron_retention	FALSE	canonical	3	2160	junction_5	91.6787018614465	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111505087	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.19	chr12	+	3721	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-28	70	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTATAGCTCATGC	NA	False	NA	-82	True	ATTAAA	-45	NA	111504602	111513092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.190	chr12	+	4027	11	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-115	73	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	699.726953889873	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTATAGCTCATGCTTT	NA	False	NA	-79	True	AGTAAA	-19	NA	111505100	111513095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111505587_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.191	chr12	+	7054	1	FSM	ENSMUSG00000064493.3	ENSMUST00000082559.3	127	1	-2274	-4653	-2274	4653	mono-exon	FALSE	NA	NA	NA	NA	NA	1666	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGAGCCTGTATTTTGG	NA	False	NA	NA	False	TTTAAA	-25	NA	111505100	111512154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111505100_111512200
ES.8514.192	chr12	+	3072	11	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-110	712	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	699.726953889873	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111505105	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111505587_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.193	chr12	+	2916	11	NNC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-76	713	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	706.579818562631	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111505139	111512146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111505464_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.194	chr12	+	3627	11	FSM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	10	-1668	10	3	multi-exon	FALSE	canonical	3	20	junction_1	700.620753332357	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111505225	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111505382_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.195	chr12	+	4238	6	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-14	0	intron_retention	FALSE	canonical	3	2160	junction_2	105.057317688964	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTGGGCTATGA	NA	False	NA	18	True	AATAAA	-19	NA	111505250	111511357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.196	chr12	+	4132	5	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	1219	-3	intron_retention	FALSE	canonical	3	2160	junction_1	107.067735569592	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATCACTTGGGGTTTTT	NA	False	NA	9	True	AAAACA	-15	NA	111507295	111513183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.197	chr12	+	1834	4	ISM	ENSMUSG00000021282.18	ENSMUST00000050993.11	1969	11	3424	-5	-19	5	intron_retention	FALSE	canonical	3	2160	junction_1	123.51608082441	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGGGCTATGAATGGC	NA	False	NA	23	True	AATAAA	-24	NA	111508639	111511362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111508745_111509113_111509276_111509533_111509699_111509960
ES.8514.198	chr12	+	3445	4	ISM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	4042	-3	33	3	intron_retention	FALSE	canonical	3	2160	junction_1	123.51608082441	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111508691	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111508745_111509113_111509276_111509533_111509699_111509960
ES.8514.2	chr12	+	2573	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	-29	1506	-29	247	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTGTGGTTTTCCAGT	NA	False	NA	NA	False	AGTAAA	-45	NA	111504420	111511680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.20	chr12	+	5053	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	153	-1156	-28	1156	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTATTTTATGTATATG	NA	False	NA	NA	False	AATAAA	-21	NA	111504602	111514342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.21	chr12	+	3898	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	154	-2	-27	2	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGGGGTTTTTTTTTG	NA	False	NA	14	True	AAAACA	-20	NA	111504603	111513188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.22	chr12	+	4954	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	1736	junction_1	205.262313355254	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504603	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.23	chr12	+	4536	6	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	0	intron_retention	FALSE	canonical	3	1736	junction_1	258.00046511586	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGACTTTGGGCTAT	NA	False	NA	16	True	AATAAA	-17	NA	111504603	111511355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111509699_111509960_111510096_111510962
ES.8514.24	chr12	+	3150	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	154	746	-27	-582	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGGCGTGCT	NA	False	NA	NA	False	NA	NA	NA	111504603	111512440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.25	chr12	+	4785	10	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-27	-79	intron_retention	FALSE	canonical	3	2160	junction_6	86.485708517522	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTCATGCTTTGAATTT	NA	False	NA	-73	True	AGTAAA	-25	NA	111504603	111513101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.26	chr12	+	3593	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	23	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	707.608853816853	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504603	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.27	chr12	+	940	6	ISM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	154	6151	-27	29	5prime_fragment	FALSE	canonical	3	1736	junction_1	240.909443567495	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGAAGATTTTTTTT	NA	False	NA	NA	False	AATAAA	-12	NA	111504603	111507035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894
ES.8514.28	chr12	+	3646	11	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	700.960776363414	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATTATAGCTCATGCT	NA	False	NA	-81	True	AGTAAA	-17	NA	111504603	111513093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509952_111510096_111510962
ES.8514.3	chr12	+	4209	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	-28	-131	-28	131	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTCTAGCCTATCTTA	NA	False	NA	NA	False	TTTAAA	-29	NA	111504421	111513317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.30	chr12	+	4468	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	4	intron_retention	FALSE	canonical	3	1736	junction_1	225.59979012872	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504603	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.31	chr12	+	3855	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	706	intron_retention	FALSE	canonical	3	46	junction_6	733.565720754907	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCATACTTCTGAGTCA	NA	False	NA	NA	False	TTTAAA	-10	NA	111504603	111512139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.32	chr12	+	3727	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	725	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTGTATTTTGGTGTA	NA	False	NA	NA	False	TTTAAA	-29	NA	111504603	111512158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.33	chr12	+	6336	7	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	1736	junction_1	234.961994562714	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504603	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111508280_111508585_111508745_111509113_111509699_111509960_111510096_111510962
ES.8514.34	chr12	+	4681	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	6	intron_retention	FALSE	canonical	3	1736	junction_1	224.218006158547	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGCTATGAATGGCT	NA	False	NA	24	True	AATAAA	-25	NA	111504603	111511363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.35	chr12	+	3561	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	23	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	704.792026061589	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504603	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.36	chr12	+	6425	4	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	-6	intron_retention	FALSE	canonical	3	2198	junction_1	108.892403571395	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504603	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111509699_111509960_111510096_111510962
ES.8514.38	chr12	+	4235	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	712	intron_retention	FALSE	canonical	3	1736	junction_1	201.221823424355	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504603	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.39	chr12	+	4334	9	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-27	-619	intron_retention	FALSE	canonical	3	2160	junction_5	91.6787018614465	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTGCATTCTGGGAG	NA	False	NA	NA	False	ATTAAA	-21	NA	111504603	111512403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.4	chr12	+	3212	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-14	6	intron_retention	FALSE	canonical	3	17	junction_7	733.779981825884	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGCTATGAATGGCT	NA	False	NA	24	True	AATAAA	-25	NA	111504435	111511363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.40	chr12	+	4619	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-27	28	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCATTTTACTGT	NA	False	NA	NA	False	ATTAAA	-43	NA	111504603	111513050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.41	chr12	+	5251	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	712	intron_retention	FALSE	canonical	3	1736	junction_1	225.59979012872	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504604	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.42	chr12	+	2715	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	-45	877	-26	712	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504604	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.43	chr12	+	5342	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	3	intron_retention	FALSE	canonical	3	2160	junction_4	92.8835127392128	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504604	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.44	chr12	+	1876	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	4	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	704.792026061589	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504604	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.45	chr12	+	5993	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	23	intron_retention	FALSE	canonical	3	1736	junction_1	212.646273186247	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504604	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.46	chr12	+	4274	7	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	-3	intron_retention	FALSE	canonical	3	1736	junction_1	236.778905310418	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTTCAGACTTTGGGC	NA	False	NA	13	True	AATAAA	-14	NA	111504604	111511352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.47	chr12	+	3829	10	NIC	ENSMUSG00000021282.18	novel	1969	11	NA	NA	-26	713	intron_retention	FALSE	canonical	3	2160	junction_6	86.485708517522	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTGAGTCAGAGCCTG	NA	False	NA	NA	False	TTTAAA	-17	NA	111504604	111512146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.48	chr12	+	4832	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	-6	intron_retention	FALSE	canonical	0	0	junction_2	804.635498666499	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504604	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.5	chr12	+	3041	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	-11	1020	-11	733	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGTGTAAGACTTGG	NA	False	NA	NA	False	TTTAAA	-37	NA	111504438	111512166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.50	chr12	+	3755	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	-45	-163	-26	-1	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCACTTGGGGTTTTTTT	NA	False	NA	11	True	AAAACA	-17	NA	111504604	111513185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.51	chr12	+	6757	6	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	-6	intron_retention	FALSE	canonical	3	1736	junction_1	263.39217907903	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504604	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111508280_111508585_111509699_111509960
ES.8514.52	chr12	+	3667	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	4	intron_retention	FALSE	canonical	3	1736	junction_1	209.579937016881	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504604	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.53	chr12	+	6441	8	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	3	intron_retention	FALSE	canonical	0	0	junction_4	817.777076554959	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504604	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508907_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.54	chr12	+	3873	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	90	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	700.90262519126	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCCTTTTAAAAACAAGT	NA	False	NA	102	True	AATGAA	-44	NA	111504604	111513276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.55	chr12	+	3173	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	-476	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATCATACAAATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	111504604	111512546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.56	chr12	+	4612	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-26	710	intron_retention	FALSE	canonical	3	1736	junction_1	212.245693419207	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504604	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.57	chr12	+	5796	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	74	intron_retention	FALSE	canonical	3	1736	junction_1	201.987409459716	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTATAGCTCATGCTTTG	NA	False	NA	-78	True	AGTAAA	-20	NA	111504605	111513096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.58	chr12	+	2438	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	4	intron_retention	FALSE	canonical	3	1736	junction_1	196.76981475826	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGGGCTATGAATGG	NA	False	NA	22	True	AATAAA	-23	NA	111504605	111511361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.59	chr12	+	4966	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	1154	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTCTATTTTATGTATA	NA	False	NA	NA	False	AATAAA	-19	NA	111504605	111514340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.6	chr12	+	4569	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	19	6	intron_retention	FALSE	canonical	3	1736	junction_1	210.835503117952	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGCTATGAATGGCT	NA	False	NA	24	True	AATAAA	-25	NA	111504468	111511363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.60	chr12	+	5133	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	23	intron_retention	FALSE	canonical	3	1736	junction_1	201.221823424355	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504605	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.61	chr12	+	4267	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	126	intron_retention	FALSE	canonical	3	1736	junction_1	199.252628589939	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAATGAGTCTAGCCTA	NA	False	NA	NA	False	TTTAAA	-24	NA	111504605	111513312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.62	chr12	+	1265	9	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-25	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	774.893218450129	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504605	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508621_111512835
ES.8514.64	chr12	+	5025	11	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-24	-3	intron_retention	FALSE	canonical	0	0	junction_7	705.739675801212	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAATTTCTGTCTGCTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	111504606	111513019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508911_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.65	chr12	+	3743	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-23	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	891.783142671871	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504607	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505843_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509119_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.66	chr12	+	3205	13	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-20	23	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	653.911096573703	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504610	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962_111511234_111511776
ES.8514.67	chr12	+	5379	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	1736	junction_1	211.303654428881	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504610	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.68	chr12	+	2095	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-20	6	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGCTATGAATGGCT	NA	False	NA	24	True	AATAAA	-25	NA	111504610	111511363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.69	chr12	+	2748	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-20	712	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	669.844943202443	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504610	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.7	chr12	+	3226	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	30	712	intron_retention	FALSE	canonical	3	1736	junction_1	199.252628589939	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504479	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.70	chr12	+	5224	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	1736	junction_1	200.212109745862	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTTCTGTCTGCTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	111504611	111513020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.71	chr12	+	4387	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	714	intron_retention	FALSE	canonical	3	1736	junction_1	211.550082722744	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGAGTCAGAGCCTGT	NA	False	NA	NA	False	TTTAAA	-18	NA	111504611	111512147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.72	chr12	+	5178	9	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	71	intron_retention	FALSE	canonical	3	1736	junction_1	215.577712206063	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAACAAGTTTGAAAAT	NA	False	NA	83	True	AATGAA	-25	NA	111504611	111513257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.73	chr12	+	3974	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	3	intron_retention	FALSE	canonical	3	1736	junction_1	199.252628589939	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504611	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.74	chr12	+	6335	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	3	intron_retention	FALSE	canonical	3	1736	junction_1	224.218006158547	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504611	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.76	chr12	+	2869	13	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	712	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	869.140907256508	1666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTCTGAGTCAGAGCCT	NA	False	NA	NA	False	TTTAAA	-16	NA	111504611	111512145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508674_111508813_111508907_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.78	chr12	+	4003	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-19	0	intron_retention	FALSE	canonical	3	2160	junction_7	92.3556170462847	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTTGGGGTTTTTTTT	NA	False	NA	12	True	AAAACA	-18	NA	111504611	111513186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.8	chr12	+	3305	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	142	603	-39	-439	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGAGTTTGAGTGTGGA	NA	False	NA	NA	False	ATTAAA	-33	NA	111504591	111512583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.80	chr12	+	5130	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-8	-475	intron_retention	FALSE	canonical	3	46	junction_6	727.899430036124	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCATACAAATATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	111504622	111512547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.81	chr12	+	4822	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-8	3	intron_retention	FALSE	canonical	3	1736	junction_1	208.679327506093	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504622	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.82	chr12	+	3182	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-6	3	intron_retention	FALSE	canonical	3	1736	junction_1	192.565027977564	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTTGGGCTATGAATG	NA	False	NA	21	True	AATAAA	-22	NA	111504624	111511360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.83	chr12	+	5750	3	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	-6	1	intron_retention	FALSE	canonical	3	1736	junction_1	277.5	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGACTTTGGGCTATG	NA	False	NA	17	True	AATAAA	-18	NA	111504624	111511356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111510096_111510962
ES.8514.86	chr12	+	3067	11	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-3	-476	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	926.512493169952	1671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATCATACAAATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	111504627	111512546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508277_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8514.87	chr12	+	3717	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-2	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	675.291562375005	1673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504628	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506247_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.88	chr12	+	5452	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	1736	junction_1	217.692349851053	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504628	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506737_111506894_111508280_111508585_111508745_111509113_111509699_111509960_111510096_111510962
ES.8514.89	chr12	+	6081	8	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-2	22	intron_retention	FALSE	canonical	3	1736	junction_1	218.617548822278	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTATGTTTTCATTT	NA	False	NA	NA	False	ATTAAA	-37	NA	111504628	111513044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.9	chr12	+	1958	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	-58	1647	-39	18	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGCTTATACTGAAGTA	NA	False	NA	36	True	AATAAA	-37	NA	111504591	111511375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.90	chr12	+	4147	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-2	527	intron_retention	FALSE	canonical	3	1736	junction_1	200.212109745862	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTGTATCTTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	111504628	111511960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.91	chr12	+	3759	12	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-2	23	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTATGTTTTCATTTT	NA	False	NA	NA	False	ATTAAA	-38	NA	111504628	111513045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.93	chr12	+	3570	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	-20	-3	-1	3	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTGCTTTAATATT	NA	False	NA	NA	False	ATTAAA	-18	NA	111504629	111513025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.95	chr12	+	1857	12	NNC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	682.549777193655	1655	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCATTCTTCAGACTTTG	NA	False	NA	10	True	AATAAA	-11	NA	111504634	111511349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508674_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.96	chr12	+	4713	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	5	710	intron_retention	FALSE	canonical	3	46	junction_6	727.899430036124	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504635	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509213_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.97	chr12	+	5800	6	NIC	ENSMUSG00000021282.18	novel	3543	11	NA	NA	7	710	intron_retention	FALSE	canonical	3	2291	junction_5	60.437074714119	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504637	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111506122_111506234_111506737_111506894_111508280_111508585_111509699_111509960_111510096_111510962
ES.8514.98	chr12	+	5320	7	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-3	710	intron_retention	FALSE	canonical	3	1736	junction_1	232.677709862089	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTCTGAGTCAGAGC	NA	False	NA	NA	False	TTTAAA	-14	NA	111504646	111512143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ES.8514.99	chr12	+	4652	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	-1	-6	intron_retention	FALSE	canonical	3	17	junction_7	733.779981825884	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAAATTTCTGTCTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	111504648	111513016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
ES.8515.1	chr12	-	172	1	Intergenic	novelGene_7031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1064	False	NA	NA	False	NA	NA	NA	111514668	111514496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111514500_111514700
ES.8516.1	chr12	+	175	1	Intergenic	novelGene_7034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACAGCTACAGT	NA	False	NA	8	True	NA	NA	NA	111520311	111520486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111520300_111520500
ES.8517.1	chr12	+	98	1	Intergenic	novelGene_7036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111522375	111522473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111522400_111522500
ES.8518.1	chr12	+	188	1	Intergenic	novelGene_7037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGTTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	111529891	111530079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111529900_111530100
ES.8519.1	chr12	+	185	1	Intergenic	novelGene_7039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGTTGTTATTATTA	NA	False	NA	NA	False	NA	NA	NA	111532315	111532500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111532300_111532500
ES.852.1	chr1	+	153	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAGTTGTTTCATA	NA	False	NA	NA	False	NA	NA	NA	81265391	81265544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_81265400_81265500
ES.8520.1	chr12	+	3378	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-52	-5	-52	2	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	684	False	NA	NA	False	ATTAAA	-23	NA	111540904	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.10	chr12	+	4838	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-35	2	intron_retention	FALSE	canonical	3	329	junction_16	61.8801449881139	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	701	False	NA	NA	False	ATTAAA	-23	NA	111540921	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.11	chr12	+	3384	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-34	2	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	112.928461294052	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	702	False	NA	NA	False	ATTAAA	-23	NA	111540922	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.12	chr12	+	4093	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-34	4	intron_retention	FALSE	canonical	3	315	junction_15	70.4707386083047	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGTCTCCTACTGCT	702	False	NA	NA	False	ATTAAA	-25	NA	111540922	111622659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.13	chr12	+	3089	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-33	-87	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	127.415597063311	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGGTTTTGTGTTTG	703	False	NA	2	True	AATACA	-14	NA	111540923	111622507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.14	chr12	+	3079	13	ISM	ENSMUSG00000007411.17	ENSMUST00000221753.2	2394	18	-561	20745	-33	6444	5prime_fragment	FALSE	canonical	3	404	junction_3	39.6452147876078	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTATCAAGTGGAAGTG	703	False	NA	37	True	AATAAA	-34	NA	111540923	111601304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050
ES.8520.16	chr12	+	3398	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	147.775079253719	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	703	False	NA	NA	False	ATTAAA	-19	NA	111540923	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600031_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.17	chr12	+	3110	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.485571163497	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	703	False	NA	NA	False	ATTAAA	-23	NA	111540923	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111540996_111541244_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.18	chr12	+	3289	15	NIC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-33	2	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	162.85313278271	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	703	False	NA	NA	False	ATTAAA	-23	NA	111540923	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.19	chr12	+	3386	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-33	2	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	703	False	NA	NA	False	ATTAAA	-23	NA	111540923	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.2	chr12	+	3454	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-580	-67	-52	6	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCCTACTGCTCT	684	False	NA	NA	False	ATTAAA	-27	NA	111540904	111622661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.20	chr12	+	3679	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-31	120	intron_retention	FALSE	canonical	3	315	junction_15	70.4707386083047	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCTTGTTTCCAT	705	False	NA	28	True	ATTAAA	-14	NA	111540925	111622248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.21	chr12	+	2972	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-31	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	179.817083709391	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCTTGTTTCCATT	705	False	NA	29	True	ATTAAA	-15	NA	111540925	111622249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111579678_111579702_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.22	chr12	+	3202	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-29	148	-29	-90	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGTGGTTTTGTGT	707	False	NA	-1	True	AATACA	-11	NA	111540927	111622504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.23	chr12	+	3223	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-25	-89	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	112.928461294052	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGTGGTTTTGTGTT	711	False	NA	0	True	AATACA	-12	NA	111540931	111622505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.24	chr12	+	3231	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	122	intron_retention	FALSE	canonical	3	315	junction_15	67.9776790112019	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	712	False	NA	30	True	ATTAAA	-16	NA	111540932	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.25	chr12	+	3681	19	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	196.488407913659	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	712	False	NA	NA	False	ATTAAA	-23	NA	111540932	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111564417_111564561_111564660_111564822_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.26	chr12	+	4641	15	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	-8	intron_retention	FALSE	canonical	3	34	junction_3	127.118316251163	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTGCTTGTGTGTGTT	712	False	NA	81	True	TTTAAA	-12	NA	111540932	111622586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.27	chr12	+	2971	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-24	123	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTGTTTCCATTGC	712	False	NA	31	True	ATTAAA	-17	NA	111540932	111622251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.28	chr12	+	3328	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_16	146.502346397592	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	713	False	NA	NA	False	ATTAAA	-23	NA	111540933	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.29	chr12	+	4035	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-23	2	intron_retention	FALSE	canonical	3	38	junction_15	119.455356607488	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	713	False	NA	NA	False	ATTAAA	-23	NA	111540933	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.3	chr12	+	3602	19	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-43	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.843315188329	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	693	False	NA	NA	False	ATTAAA	-23	NA	111540913	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111564660_111564822_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.30	chr12	+	3061	15	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-22	1	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	187.273836389172	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	714	False	NA	NA	False	ATTAAA	-19	NA	111540934	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.31	chr12	+	2964	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-21	122	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	112.928461294052	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	715	False	NA	30	True	ATTAAA	-16	NA	111540935	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.33	chr12	+	2955	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-20	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	154.814354550862	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	716	False	NA	30	True	ATTAAA	-16	NA	111540936	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613915_111614163_111618391_111618419_111621703
ES.8520.34	chr12	+	3437	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	122.857753852416	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	716	False	NA	NA	False	ATTAAA	-23	NA	111540936	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600031_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.35	chr12	+	4298	15	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-17	122	intron_retention	FALSE	canonical	3	34	junction_3	127.118316251163	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	719	False	NA	30	True	ATTAAA	-16	NA	111540939	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.36	chr12	+	4412	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-16	122	intron_retention	FALSE	canonical	3	329	junction_16	61.8801449881139	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	720	False	NA	30	True	ATTAAA	-16	NA	111540940	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.37	chr12	+	3241	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-16	140	-12	-79	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTTTGTTTCGTGA	724	False	NA	10	True	AATACA	-22	NA	111540944	111622515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.38	chr12	+	4652	15	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-12	2	intron_retention	FALSE	canonical	3	34	junction_3	157.769933893681	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	724	False	NA	NA	False	ATTAAA	-23	NA	111540944	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.39	chr12	+	2886	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-10	122	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	726	False	NA	30	True	ATTAAA	-16	NA	111540946	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.4	chr12	+	3410	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-43	-2	-39	2	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	697	False	NA	NA	False	ATTAAA	-23	NA	111540917	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.40	chr12	+	3400	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-10	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	125.241303422812	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	726	False	NA	NA	False	ATTAAA	-23	NA	111540946	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589686_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.41	chr12	+	3405	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	125.017608134814	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAACCTTGCACTGTCT	727	False	NA	NA	False	ATTAAA	-16	NA	111540947	111622650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614167_111619795_111619869_111621703
ES.8520.42	chr12	+	3161	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-9	-90	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_16	146.502346397592	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCCTGTGGTTTTGTGT	727	False	NA	-1	True	AATACA	-11	NA	111540947	111622504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.43	chr12	+	2752	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-7	122	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	132.126303210224	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	729	False	NA	30	True	ATTAAA	-16	NA	111540949	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.44	chr12	+	4188	16	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	153.317912268013	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	729	False	NA	NA	False	ATTAAA	-23	NA	111540949	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111542391_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.45	chr12	+	3342	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	128.758434189765	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	734	False	NA	NA	False	ATTAAA	-19	NA	111540954	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.46	chr12	+	2814	16	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-2	119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	152.93217087614	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTGTCTTGTTTCCA	734	False	NA	27	True	ATTAAA	-13	NA	111540954	111622247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593613_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.48	chr12	+	3285	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	734	False	NA	NA	False	ATTAAA	-23	NA	111540954	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.49	chr12	+	3093	15	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	168.06139548707	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	734	False	NA	NA	False	ATTAAA	-23	NA	111540954	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.5	chr12	+	3003	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	-43	405	-39	122	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	697	False	NA	30	True	ATTAAA	-16	NA	111540917	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.50	chr12	+	2921	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	-2	402	-2	122	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	734	False	NA	30	True	ATTAAA	-16	NA	111540954	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.51	chr12	+	2918	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-2	122	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_15	148.336557783306	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	734	False	NA	30	True	ATTAAA	-16	NA	111540954	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.52	chr12	+	3399	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	125.017608134814	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	734	False	NA	NA	False	ATTAAA	-23	NA	111540954	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614167_111619801_111619869_111621703
ES.8520.53	chr12	+	2897	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	120	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_16	146.502346397592	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCTTGTTTCCAT	735	False	NA	28	True	ATTAAA	-14	NA	111540955	111622248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.54	chr12	+	3156	3	ISM	ENSMUSG00000007411.17	ENSMUST00000221448.2	539	6	-492	20258	-1	-8756	5prime_fragment	FALSE	canonical	3	407	junction_2	12	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGTAATGAGCCGGG	735	False	NA	NA	False	NA	NA	NA	111540955	111573328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111541536_111559010_111559203_111570944
ES.8520.55	chr12	+	3522	19	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	155.670681604184	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	735	False	NA	NA	False	ATTAAA	-23	NA	111540955	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111547683_111547807_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.57	chr12	+	3462	13	NIC	ENSMUSG00000007411.17	novel	4015	16	NA	NA	-1	120	intron_retention	FALSE	canonical	3	34	junction_3	163.891965602005	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCTTGTTTCCAT	735	False	NA	28	True	ATTAAA	-14	NA	111540955	111622248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.58	chr12	+	3105	16	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	159.436702870519	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	735	False	NA	NA	False	ATTAAA	-23	NA	111540955	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.59	chr12	+	3158	13	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	170.672932827675	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	735	False	NA	NA	False	ATTAAA	-23	NA	111540955	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.6	chr12	+	3274	15	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-39	-1	combination_of_known_splicesites	FALSE	canonical	3	34	junction_3	161.027440936922	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCACTGTCTCCTA	697	False	NA	NA	False	ATTAAA	-20	NA	111540917	111622654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ES.8520.60	chr12	+	4797	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	2	intron_retention	FALSE	non_canonical	0	0	junction_4	126.486597610182	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	735	False	NA	NA	False	ATTAAA	-23	NA	111540955	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581872_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.61	chr12	+	3207	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	127.415597063311	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	735	False	NA	NA	False	ATTAAA	-23	NA	111540955	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.62	chr12	+	3009	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	1	122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	122.857753852416	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	737	False	NA	30	True	ATTAAA	-16	NA	111540957	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600031_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.63	chr12	+	3337	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	154.814354550862	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	737	False	NA	NA	False	ATTAAA	-19	NA	111540957	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613915_111614163_111618391_111618419_111621703
ES.8520.64	chr12	+	6227	16	ISM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-527	347	1	119	intron_retention	FALSE	canonical	3	352	junction_15	54.3332924335224	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTGTCTTGTTTCCA	737	False	NA	27	True	ATTAAA	-13	NA	111540957	111622247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391
ES.8520.65	chr12	+	3234	16	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	153.990245001284	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	737	False	NA	NA	False	ATTAAA	-23	NA	111540957	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.66	chr12	+	4252	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	125.636758775883	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	737	False	NA	NA	False	ATTAAA	-23	NA	111540957	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111542391_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.68	chr12	+	3135	15	NIC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-2	5	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	156.799901733622	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTGTCTCCTACTGCTC	738	False	NA	NA	False	ATTAAA	-26	NA	111540958	111622660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.69	chr12	+	1978	13	ISM	ENSMUSG00000007411.17	ENSMUST00000221753.2	2394	18	-520	21805	4	5384	5prime_fragment	FALSE	canonical	3	404	junction_3	39.6452147876078	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAAGCCCTGCTGTGCC	744	False	NA	NA	False	AATAAA	-19	NA	111540964	111600244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050
ES.8520.7	chr12	+	3031	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-566	342	-38	124	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTTCCATTGCC	698	False	NA	32	True	ATTAAA	-18	NA	111540918	111622252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.70	chr12	+	3034	13	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-4	6422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	130.092168181725	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACATTTTGGCTTCAA	745	False	NA	15	True	AATAAA	-12	NA	111540965	111601282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600031
ES.8520.71	chr12	+	4020	16	FSM	ENSMUSG00000007411.17	ENSMUST00000222080.2	4015	16	-3	-2	-3	2	multi-exon	FALSE	canonical	3	31	junction_14	122.225401978839	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	746	False	NA	NA	False	ATTAAA	-23	NA	111540966	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ES.8520.72	chr12	+	3385	17	NNC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	125.017608134814	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTGCACTGTCTCC	748	False	NA	NA	False	ATTAAA	-18	NA	111540968	111622652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614173_111619802_111619869_111621703
ES.8520.73	chr12	+	2796	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-1	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	150.316160464821	578	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	748	False	NA	30	True	ATTAAA	-16	NA	111540968	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593644_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.74	chr12	+	2961	13	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	7	6427	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	116.353955908493	546	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGCTTCAACATGC	756	False	NA	20	True	AATAAA	-17	NA	111540976	111601287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050
ES.8520.75	chr12	+	3177	14	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	11	-5	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	157.510251380476	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTAAAACCTTGCACTG	760	False	NA	NA	False	ATTAAA	-13	NA	111540980	111622647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.76	chr12	+	3062	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	219	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	125.280971417482	579	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	968	False	NA	NA	False	ATTAAA	-23	NA	111541188	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593613_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.77	chr12	+	4724	14	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	-203	121	intron_retention	FALSE	canonical	0	0	junction_12	134.29139032266	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTCTTGTTTCCATT	1024	False	NA	29	True	ATTAAA	-15	NA	111541244	111622249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111618391_111619869_111621703
ES.8520.78	chr12	+	5895	11	NIC	ENSMUSG00000007411.17	novel	4015	16	NA	NA	4445	122	intron_retention	FALSE	canonical	3	91	junction_10	126.28238198577	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	NA	False	NA	30	True	ATTAAA	-16	NA	111559028	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111594349_111594623_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.79	chr12	+	2422	2	NNC	ENSMUSG00000007411.17	novel	496	7	NA	NA	-3457	-8756	intron_retention	FALSE	canonical	0	0	junction_1	0	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAAGTAATGAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	111567487	111573328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111567526_111570944
ES.8520.8	chr12	+	3055	13	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-36	2	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	198.617775723457	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	700	False	NA	NA	False	ATTAAA	-23	NA	111540920	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111541536_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.80	chr12	+	3182	1	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-830	-8788	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111570114	111573296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111570100_111573300
ES.8520.81	chr12	+	177	1	Intergenic	novelGene_7043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATTTGTGTTGATTT	NA	False	NA	NA	False	NA	NA	NA	111572560	111572737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111572600_111572700
ES.8520.82	chr12	+	177	1	Intergenic	novelGene_7044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	111573501	111573678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111573500_111573700
ES.8520.83	chr12	+	178	1	Intergenic	novelGene_7045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATATTTGATCA	8393	False	NA	NA	False	NA	NA	NA	111582909	111583087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111582900_111583100
ES.8520.84	chr12	+	3713	6	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	3898	-2	intron_retention	FALSE	canonical	3	329	junction_5	96.7524676687887	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAACCTTGCACTGTCT	2180	False	NA	NA	False	ATTAAA	-16	NA	111594840	111622650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
ES.8520.85	chr12	+	1987	5	ISM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	54136	-1	4150	1	3prime_fragment	FALSE	canonical	3	91	junction_4	192.827643246501	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	2432	False	NA	NA	False	ATTAAA	-19	NA	111595092	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ES.8520.86	chr12	+	1592	6	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	9107	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	181.254075816242	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCACTGTCTCCT	7389	False	NA	NA	False	ATTAAA	-19	NA	111600049	111622653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111600269_111606370_111606475_111613915_111614163_111618391_111618419_111619823_111619869_111621703
ES.8520.87	chr12	+	5118	3	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	-6087	122	intron_retention	FALSE	non_canonical	0	0	junction_1	164.5	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTTGTTTCCATTG	NA	False	NA	30	True	ATTAAA	-16	NA	111615005	111622250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111615287_111615578_111619869_111621703
ES.8520.88	chr12	+	3085	1	Genic_Genomic	ENSMUSG00000007411.17	novel	NA	NA	NA	NA	-1520	2	mono-exon	FALSE	NA	NA	NA	NA	NA	499	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	NA	False	NA	NA	False	ATTAAA	-23	NA	111619572	111622657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_111619600_111622700
ES.8520.9	chr12	+	3292	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	-564	79	-36	-79	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTTTGTTTCGTGA	700	False	NA	10	True	AATACA	-22	NA	111540920	111622515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ES.8521.1	chr12	+	2165	4	NNC	ENSMUSG00000060950.13	novel	2433	3	NA	NA	-7550	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	100.883871632464	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTCTTGTTCCCACAA	8936	False	NA	6	True	AATAAA	-18	NA	111636988	111650337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111637218_111645036_111645397_111647235_111647503_111649028
ES.8521.10	chr12	+	1664	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	9	760	-2	-760	multi-exon	FALSE	canonical	3	213	junction_2	1	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGGTTTTGAGACTA	NA	False	NA	14	True	NA	NA	NA	111644547	111649576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111645397_111647235_111647503_111649028
ES.8521.11	chr12	+	2020	4	NNC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	100.412482623759	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTATTGTCTTGTTCC	NA	False	NA	1	True	AATAAA	-13	NA	111644549	111650332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111644639_111645036_111645397_111647235_111647503_111649028
ES.8521.12	chr12	+	5339	2	ISM	ENSMUSG00000060950.13	ENSMUST00000221089.2	601	3	16	-2915	5	-2	intron_retention	FALSE	canonical	3	64	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTGTCTTGTTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	111644554	111650334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111644596_111645036
ES.8521.2	chr12	+	156	1	Intergenic	novelGene_7046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111641167	111641323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111641200_111641300
ES.8521.3	chr12	+	3811	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	-1378	0	-1378	0	multi-exon	FALSE	canonical	3	213	junction_2	1	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111643160	111650336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111645397_111647235_111647503_111649028
ES.8521.4	chr12	+	1924	5	NNC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-18	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.7736636801613	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTGTCTTGTTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	111644520	111650334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111644596_111645036_111645237_111645320_111645397_111647235_111647503_111649028
ES.8521.5	chr12	+	1996	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644534	111650336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
ES.8521.6	chr12	+	3954	2	ISM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	5	0	5	0	intron_retention	FALSE	canonical	3	215	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644543	111650336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111645397_111647235
ES.8521.7	chr12	+	1259	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-4	-726	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCGTCGGAAGCTTTGGG	NA	False	NA	48	True	ACTAAA	-13	NA	111644545	111649610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
ES.8521.8	chr12	+	3511	3	FSM	ENSMUSG00000060950.13	ENSMUST00000221089.2	601	3	7	-2917	-4	0	multi-exon	FALSE	canonical	3	64	junction_1	75.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644545	111650336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111644596_111645036_111645397_111647235
ES.8521.9	chr12	+	1927	5	NNC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	93.7736636801613	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTATTGTCTTGTTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	111644547	111650334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028_111649901_111649954
ES.8522.1	chr12	+	1198	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	-190	57	-190	-57	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1351	False	NA	NA	False	NA	NA	NA	111679504	111700597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ES.8522.11	chr12	+	2568	18	Fusion	ENSMUSG00000021288.20_ENSMUSG00000037787.15	novel	2261	14	NA	NA	5	-1	multi-exon	FALSE	canonical	2	5	junction_4	153.712894642053	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTACCAGAATGAAAGCC	1571	False	NA	NA	False	ATTAAA	-17	NA	111679724	111773144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
ES.8522.12	chr12	+	1926	1	Intergenic	novelGene_7048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	3358	False	NA	NA	False	NA	NA	NA	111681511	111683437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111681500_111683400
ES.8522.13	chr12	+	245	1	Intergenic	novelGene_7050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCACATGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	111688503	111688748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111688500_111688700
ES.8522.14	chr12	+	174	1	Intergenic	novelGene_7051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACT	NA	False	NA	NA	False	NA	NA	NA	111689717	111689891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111689700_111689900
ES.8522.15	chr12	+	302	1	Intergenic	novelGene_7057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGCAACTTT	5267	False	NA	NA	False	TATAAA	-40	NA	111718599	111718901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111718600_111718900
ES.8522.16	chr12	+	4763	17	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	46.9159820849996	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCAGAATGAAAGCCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	111725281	111773146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111757713_111759604_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.17	chr12	+	2434	16	FSM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	15	55	15	-6	multi-exon	FALSE	canonical	2	29	junction_13	35.2026514152935	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	111725297	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ES.8522.18	chr12	+	2401	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	15	3	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725297	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
ES.8522.19	chr12	+	2416	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	16	1	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	47.7933476713303	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTGTGTCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	111725298	111761330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111760770
ES.8522.2	chr12	+	4564	4	ISM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	-2	57	-2	-57	intron_retention	FALSE	canonical	3	492	junction_3	11.1455023315337	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1539	False	NA	NA	False	NA	NA	NA	111679692	111700597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455
ES.8522.20	chr12	+	10125	15	NIC	ENSMUSG00000021288.20	novel	4089	16	NA	NA	16	-9	intron_retention	FALSE	canonical	0	0	junction_13	52.6168767059174	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCAGTTCTGCAGAGC	NA	False	NA	NA	False	AATAAA	-21	NA	111725298	111769665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111762113_111766777_111766845_111767628
ES.8522.21	chr12	+	7218	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	17	-6	intron_retention	FALSE	canonical	0	0	junction_14	44.6479562802151	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	111725299	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111767628_111772509_111772748
ES.8522.22	chr12	+	2409	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	20	1	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTGTGTCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	111725302	111761330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
ES.8522.23	chr12	+	6641	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	21	-6	combination_of_known_splicesites	FALSE	canonical	2	22	junction_13	36.5306568362641	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	111725303	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.24	chr12	+	7416	13	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	21	7	intron_retention	TRUE	canonical	0	0	junction_11	40.9966123261694	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAAAGCCTGTTCATA	NA	False	NA	NA	False	ATTAAA	-25	NA	111725303	111773152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111744542_111745032_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111757109_111772441_111772509_111772748
ES.8522.25	chr12	+	2873	19	Fusion	ENSMUSG00000021286.9_ENSMUSG00000021288.20	novel	2268	16	NA	NA	22	1	multi-exon	FALSE	canonical	0	0	junction_13	273.67808542966	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	17	True	ATTAAA	-18	NA	111725304	111794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ES.8522.26	chr12	+	6593	14	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	25	1	combination_of_known_junctions	FALSE	canonical	2	41	junction_13	34.6201706093103	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTGTGTCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	111725307	111761330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111760134_111760770
ES.8522.27	chr12	+	3511	15	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	25	0	intron_retention	FALSE	canonical	1	1	junction_5	44.1999168897547	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCAGAATGAAAGCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	111725307	111773145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111744683_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
ES.8522.28	chr12	+	2378	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	27	1	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	45.6198242800971	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTGTGTCTGTC	NA	False	NA	10	True	AATAAA	-14	NA	111725309	111761330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111760082_111760134_111760770
ES.8522.29	chr12	+	2261	15	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	27	3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_13	44.4994840602973	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725309	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111772441_111772509_111772748
ES.8522.3	chr12	+	3771	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	6	-226	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	219.605327804222	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAACCAGGGCTGGT	1547	False	NA	0	True	NA	NA	NA	111679700	111700428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696608_111697223
ES.8522.30	chr12	+	2397	16	FSM	ENSMUSG00000021288.20	ENSMUST00000122300.8	2268	16	-136	7	28	-6	multi-exon	FALSE	canonical	2	29	junction_13	39.7419453754119	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	111725310	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111761981_111762113_111772441_111772509_111772748
ES.8522.31	chr12	+	4010	16	NIC	ENSMUSG00000021288.20	novel	4089	16	NA	NA	29	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	55.5825712091679	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGAGCTGTTTTATGT	NA	False	NA	NA	False	AATAAA	-31	NA	111725311	111769675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111766777_111766845_111767628
ES.8522.32	chr12	+	2365	16	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	31	7	combination_of_known_splicesites	FALSE	canonical	2	51	junction_12	36.3315595897317	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAAAGCCTGTTCATA	NA	False	NA	NA	False	ATTAAA	-25	NA	111725313	111773152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111772441_111772509_111772748
ES.8522.33	chr12	+	2445	17	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	34	-3	combination_of_known_splicesites	FALSE	canonical	2	16	junction_13	47.4208221670607	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCCTGTTCATAACTAT	NA	False	NA	NA	False	ATTAAA	-30	NA	111725316	111773157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.34	chr12	+	7197	13	NNC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	34	0	intron_retention	FALSE	non_canonical	0	0	junction_5	47.6812332055286	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725316	111761331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743471_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782
ES.8522.35	chr12	+	2247	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	36	1	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	36.2404808050278	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCAGAATGAAAGCCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	111725318	111773146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
ES.8522.37	chr12	+	2711	18	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	43	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	53.3612095545173	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAATGAAAGCCTGTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	111725325	111773149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111756849_111757109_111760082_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.38	chr12	+	3598	15	NNC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	55.5831790735144	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGTCTTGTGTCTGT	NA	False	NA	9	True	AATAAA	-13	NA	111725326	111761329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743471_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111757109_111760082_111760134_111760770
ES.8522.39	chr12	+	2434	17	NNC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	45	367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	54.0858331150589	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCCTGCTATCTCATGC	NA	False	NA	NA	False	NA	NA	NA	111725327	111774645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111772441_111772509_111773432_111773491_111774216
ES.8522.4	chr12	+	2747	19	Fusion	ENSMUSG00000021288.20_ENSMUSG00000037787.15	novel	2261	14	NA	NA	-9	0	multi-exon	FALSE	canonical	2	5	junction_4	150.518363589888	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCAGAATGAAAGCCT	1551	False	NA	NA	False	ATTAAA	-18	NA	111679704	111773145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ES.8522.41	chr12	+	2725	17	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-50	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.0450525986861	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGAGTGAGTGCGTG	NA	False	NA	NA	False	ATTAAA	-15	NA	111725339	111773206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111729422_111729731_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
ES.8522.42	chr12	+	2440	16	NNC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-38	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	47.2028247742301	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111725351	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772682
ES.8522.44	chr12	+	179	1	Intergenic	novelGene_7060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111737604	111737783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111737600_111737800
ES.8522.45	chr12	+	2248	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	25	3	combination_of_known_splicesites	FALSE	canonical	2	22	junction_13	43.6935794927457	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	1096	False	NA	NA	False	ATTAAA	-21	NA	111738777	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.46	chr12	+	7941	13	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	2136	-2	intron_retention	FALSE	canonical	2	79	junction_3	25.9401019444583	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCTACCAGAATGAAAGC	3207	False	NA	NA	False	ATTAAA	-16	NA	111740888	111773143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111762113_111772441_111772509_111772748
ES.8522.47	chr12	+	1587	11	ISM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	4594	1	4594	-1	3prime_fragment	FALSE	canonical	2	16	junction_9	50.6754378372797	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCTGTGTCTTGTGTCTG	5665	False	NA	8	True	AATAAA	-12	NA	111743346	111761328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ES.8522.48	chr12	+	1168	9	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-3284	3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	48.6388155180613	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	7415	False	NA	NA	False	ATTAAA	-21	NA	111745096	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111772441_111772509_111772748
ES.8522.49	chr12	+	6117	11	NIC	ENSMUSG00000021288.20	novel	4089	16	NA	NA	-3273	3	intron_retention	FALSE	canonical	0	0	junction_8	63.5830952376494	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	7426	False	NA	NA	False	ATTAAA	-21	NA	111745107	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111766777_111766845_111767628_111772509_111772748
ES.8522.5	chr12	+	2294	1	NIC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	0	-7210	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCACATTTTTCTTT	1560	False	NA	NA	False	AATAAA	-19	NA	111679713	111682007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111679700_111682000
ES.8522.50	chr12	+	1287	10	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-297	3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	48.0565510494192	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGAATGAAAGCCTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	111748083	111773148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.51	chr12	+	5346	4	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	-373	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	49.725915443224	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACCAGAATGAAAGCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	111755382	111773145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.52	chr12	+	3724	5	NNC	ENSMUSG00000021288.20	novel	806	3	NA	NA	885	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.7900294168466	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	111756640	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111756828_111757200_111760134_111761981_111762113_111772441_111772509_111772748
ES.8522.53	chr12	+	7370	3	NNC	ENSMUSG00000021288.20	novel	806	3	NA	NA	-228	-6	intron_retention	FALSE	canonical	0	0	junction_1	70.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGCCTGTTCATAAC	2454	False	NA	NA	False	ATTAAA	-27	NA	111761385	111773154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111768283_111772441_111772509_111772748
ES.8522.54	chr12	+	7402	2	FSM	ENSMUSG00000021288.20	ENSMUST00000147203.2	968	2	-6426	-8	3726	-7	multi-exon	FALSE	canonical	3	141	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAAGCCTGTTCATAA	6580	False	NA	NA	False	ATTAAA	-26	NA	111765511	111773153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111772509_111772748
ES.8522.55	chr12	+	1377	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	-52	-531	-14	1	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	17	True	ATTAAA	-18	NA	111780589	111794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ES.8522.57	chr12	+	3742	6	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_1	25.6935789644028	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780603	111794820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111794120_111794251
ES.8522.59	chr12	+	1303	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	6	-1	6	1	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	17	True	ATTAAA	-18	NA	111780609	111794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ES.8522.6	chr12	+	825	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	20	220	1	-220	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGGGCTGGTGAGATG	1561	False	NA	6	True	NA	NA	NA	111679714	111700434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ES.8522.60	chr12	+	5260	3	NNC	ENSMUSG00000021286.9	novel	742	5	NA	NA	11	2	intron_retention	TRUE	non_canonical	0	0	junction_2	364	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780614	111794822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111793570_111793653
ES.8522.63	chr12	+	3648	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	17	-1	intron_retention	TRUE	non_canonical	0	0	junction_5	284.650467923186	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780620	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111793584_111793659_111794120_111794251
ES.8522.64	chr12	+	4792	4	NNC	ENSMUSG00000021286.9	novel	742	5	NA	NA	17	2	intron_retention	FALSE	non_canonical	0	0	junction_3	359.218905713803	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780620	111794822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111793570_111793653
ES.8522.67	chr12	+	3852	5	FSM	ENSMUSG00000021286.9	ENSMUST00000221488.2	742	5	-47	-3063	-14	2	multi-exon	FALSE	canonical	3	728	junction_1	28.4429253066558	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTCTGGCCTCACT	NA	False	NA	18	True	ATTAAA	-19	NA	111780627	111794822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450
ES.8522.68	chr12	+	1368	6	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	470	junction_4	115.575776008643	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780630	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791543_111793976_111794120_111794251
ES.8522.69	chr12	+	4557	6	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	307.325495200122	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780632	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111791363_111791450_111793570_111793653_111794120_111794251
ES.8522.7	chr12	+	757	4	NIC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	1	-220	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	240.893245143062	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGGGCTGGTGAGATG	1565	False	NA	6	True	NA	NA	NA	111679718	111700434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111679853_111689045_111689244_111696455_111696547_111700100
ES.8522.70	chr12	+	1126	6	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	306.258452944568	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	17	True	ATTAAA	-18	NA	111780643	111794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111794251
ES.8522.71	chr12	+	1571	9	NNC	ENSMUSG00000021286.9	novel	1265	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	356.531884093134	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780647	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111781314_111781424_111781760_111781960_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ES.8522.72	chr12	+	3608	7	NNC	ENSMUSG00000021286.9	novel	1265	8	NA	NA	1	-6	intron_retention	FALSE	non_canonical	0	0	junction_5	284.650467923186	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACACAGCAGGCTCTG	NA	False	NA	10	True	ATTAAA	-11	NA	111780647	111794814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111793570_111793653_111794120_111794251
ES.8522.73	chr12	+	2273	5	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	8	-1	intron_retention	FALSE	canonical	3	470	junction_3	126.767503722366	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780654	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111780812_111789675_111789727_111790188_111791543_111793976_111794120_111794251
ES.8522.74	chr12	+	3379	11	NNC	ENSMUSG00000021286.9	novel	794	8	NA	NA	8	11697	intron_retention	FALSE	canonical	0	0	junction_5	368.552031604765	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAACAGAGTTTTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	111780654	111810323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111791928_111792067_111793979_111794120_111798474_111800424_111807951_111808065_111809147_111809402_111810083
ES.8522.75	chr12	+	4837	3	ISM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	-13	-33	9	-2	intron_retention	FALSE	canonical	3	728	junction_1	32	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGCAGGCTCTGGCCT	NA	False	NA	14	True	ATTAAA	-15	NA	111780655	111794818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_111780812_111789675_111789727_111790188
ES.8522.77	chr12	+	4748	4	NIC	ENSMUSG00000021286.9	novel	742	5	NA	NA	11	-1	intron_retention	FALSE	canonical	3	728	junction_1	29.7097066068763	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780657	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111780812_111789675_111789727_111790188_111791363_111791450
ES.8522.78	chr12	+	5120	4	NNC	ENSMUSG00000021286.9	novel	742	5	NA	NA	-3	1	intron_retention	FALSE	non_canonical	0	0	junction_3	358.690209884054	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGCTCTGGCCTCAC	NA	False	NA	17	True	ATTAAA	-18	NA	111780665	111794821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111791363_111791450_111793570_111793653
ES.8522.79	chr12	+	3727	6	NNC	ENSMUSG00000021286.9	novel	742	5	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	306.258452944568	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780665	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111793570_111793653
ES.8522.8	chr12	+	1044	6	NIC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	1	-57	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	239.518350027717	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1565	False	NA	NA	False	NA	NA	NA	111679718	111700597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111679853_111688180_111688241_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ES.8522.81	chr12	+	1259	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	280.184859611571	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCAGGCTCTGGCCTC	NA	False	NA	15	True	ATTAAA	-16	NA	111780666	111794819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111780812_111789675_111789727_111790173_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ES.8522.82	chr12	+	2820	7	NNC	ENSMUSG00000021286.9	novel	541	2	NA	NA	2376	-6	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	283.642037708721	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACACAGCAGGCTCTG	3304	False	NA	10	True	ATTAAA	-11	NA	111785065	111794814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111786792_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ES.8522.9	chr12	+	978	5	NNC	ENSMUSG00000037787.15	novel	1065	5	NA	NA	2	-57	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	222.452663503946	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	1568	False	NA	NA	False	NA	NA	NA	111679721	111700597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111679853_111689045_111689244_111690773_111690842_111696462_111696547_111700100
ES.8523.1	chr12	+	1525	1	Intergenic	novelGene_7061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCAAAACCAACAACACCC	NA	False	NA	NA	False	NA	NA	NA	111829696	111831221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111829700_111831200
ES.8524.1	chr12	+	162	1	Intergenic	novelGene_7062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111844507	111844669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_111844500_111844700
ES.8525.1	chr12	-	234	1	Intergenic	novelGene_7032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGGACCAGAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	111516392	111516158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111516200_111516400
ES.8525.2	chr12	-	179	2	Intergenic	novelGene_7033	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111545963	111516217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111516374_111545940
ES.8525.3	chr12	-	171	1	Intergenic	novelGene_7035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	111521515	111521344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111521300_111521500
ES.8525.4	chr12	-	254	1	Intergenic	novelGene_7038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTGTGACCACAAGC	7266	False	NA	NA	False	NA	NA	NA	111531326	111531072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111531100_111531300
ES.8525.5	chr12	-	1834	1	Intergenic	novelGene_7040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAATCTCAAAAGTATTA	NA	False	NA	NA	False	NA	NA	NA	111546362	111544528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111544500_111546400
ES.8525.6	chr12	-	171	1	Intergenic	novelGene_7041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTGAGCAACCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	111545366	111545195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111545200_111545400
ES.8525.7	chr12	-	174	1	Intergenic	novelGene_7042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAACACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111545964	111545790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111545800_111546000
ES.8526.1	chr12	-	967	1	Antisense	novelGene_ENSMUSG00000007411.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAACCGCCCACAAAACC	NA	False	NA	NA	False	NA	NA	NA	111618910	111617943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_111617900_111618900
ES.8527.1	chr12	-	1460	9	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-13	13259	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2588.10031683472	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACGAAACAAACACAAAAC	NA	False	NA	NA	False	TATAAA	-41	NA	111638730	111622535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111622559_111635787_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.10	chr12	-	2195	3	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-345	-1	intron_retention	FALSE	canonical	3	7551	junction_2	4.5	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638323	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636449_111636595_111638014_111638199
ES.8527.12	chr12	-	1120	6	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-35	-1	at_least_one_novel_splicesite	FALSE	canonical	1	77	junction_4	3126.93930865311	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638013	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637445_111637648_111637782_111637858
ES.8527.13	chr12	-	2093	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	7551	junction_4	360.822726556962	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638730	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111637479_111637648_111638014_111638199_111638408_111638663
ES.8527.14	chr12	-	2301	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	4	-1	intron_retention	FALSE	canonical	3	7551	junction_3	376.663643055711	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638768	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111638014_111638199_111638408_111638663
ES.8527.15	chr12	-	1453	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	2719.30351977359	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638731	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638640
ES.8527.17	chr12	-	1948	4	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	7560	junction_1	154.805254002139	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636449_111636595_111636720_111637306_111638408_111638663
ES.8527.18	chr12	-	2705	3	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	42	1	-13	-1	intron_retention	FALSE	canonical	3	7560	junction_2	458	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638730	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_111636176_111636258_111636449_111636595
ES.8527.2	chr12	-	2688	2	NIC	ENSMUSG00000001270.10	novel	719	3	NA	NA	-18	3	intron_retention	FALSE	canonical	3	7921	junction_1	0	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTTGCTTCTCCTTT	NA	False	NA	-5	True	AATAAA	-24	NA	111638735	111635791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111638408_111638663
ES.8527.21	chr12	-	1602	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	7551	junction_5	321.637477086652	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.23	chr12	-	1576	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	7551	junction_5	322.430871143981	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638730	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.24	chr12	-	2971	1	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	6	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2526	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638766	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111635800_111638800
ES.8527.28	chr12	-	1592	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	7551	junction_4	141.804654366491	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
ES.8527.29	chr12	-	2163	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-13	-1	intron_retention	FALSE	canonical	3	7551	junction_4	343.007055321024	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638730	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.3	chr12	-	1885	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	-411	-2	-411	2	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTGTTGCTTCTCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	111639183	111635792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.30	chr12	-	2244	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-17	-1	intron_retention	FALSE	canonical	3	7551	junction_3	377.932864408482	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638734	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111637479_111637648_111638014_111638199_111638408_111638663
ES.8527.32	chr12	-	2496	3	FSM	ENSMUSG00000001270.10	ENSMUST00000222513.2	719	3	-16	-1761	-16	-1	multi-exon	FALSE	canonical	3	7551	junction_1	185	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111638014_111638199_111638408_111638663
ES.8527.34	chr12	-	1423	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2750.14931691101	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638731	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637655_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.37	chr12	-	2538	4	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-1	intron_retention	FALSE	canonical	3	7554	junction_3	433.227679427599	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111637479_111637648
ES.8527.38	chr12	-	1606	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2729.73509217825	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638489
ES.8527.4	chr12	-	1513	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-18	1	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTGTTGCTTCTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	111638735	111635793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
ES.8527.41	chr12	-	1013	4	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	692	-1	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_3	3791.13882040154	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111637227	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111636908
ES.8527.42	chr12	-	801	4	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-81977	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3798.17546841755	2754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGAGTGTTGCTTCT	NA	False	NA	-10	True	AATAAA	-19	NA	111720749	111635796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111720641
ES.8527.43	chr12	-	2374	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	7560	junction_2	344.537643081275	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGAGTGTTGCTTCT	NA	False	NA	-10	True	AATAAA	-19	NA	111638733	111635796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111637782_111637858_111638408_111638663
ES.8527.45	chr12	-	1423	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2729.73509217825	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGAGTGTTGCTTCT	NA	False	NA	-10	True	AATAAA	-19	NA	111638733	111635796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638400_111638663
ES.8527.46	chr12	-	1216	7	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-324	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2835.6778388166	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATTTCTGAGTGTTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	111638302	111635799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636295_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ES.8527.48	chr12	-	3038	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	-139	-1047	-113	631	multi-exon	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGCAGCGCTTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	111679500	111675290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679018
ES.8527.49	chr12	-	2751	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	19	-631	19	631	multi-exon	FALSE	canonical	3	159	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGCAGCGCTTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	111679672	111675290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679477
ES.8527.5	chr12	-	1720	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTGTTGCTTCTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	111638772	111635793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
ES.8527.50	chr12	-	3763	1	NIC	ENSMUSG00000049792.7	novel	2139	2	NA	NA	7	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679684	111675921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111675900_111679700
ES.8527.51	chr12	-	2407	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	-139	-416	-113	0	multi-exon	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679500	111675921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679018
ES.8527.52	chr12	-	2127	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	5	7	5	-7	multi-exon	FALSE	canonical	3	159	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATCTGTCCCCCTGT	NA	False	NA	NA	False	CATAAA	-13	NA	111679686	111675928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679477
ES.8527.53	chr12	-	2459	2	NNC	ENSMUSG00000049792.7	novel	2139	2	NA	NA	-116	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAAATCTGTCCCCCT	NA	False	NA	NA	False	CATAAA	-11	NA	111679503	111675930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111677847_111678960
ES.8527.54	chr12	-	1782	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	6	351	6	65	multi-exon	FALSE	canonical	3	159	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATGTGTGGTTTGTGTTT	NA	False	NA	-2	True	NA	NA	NA	111679685	111676272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679477
ES.8527.55	chr12	-	3192	1	NIC	ENSMUSG00000049792.7	novel	2139	2	NA	NA	-98	44	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTGGCTCATTATCCT	NA	False	NA	-23	True	NA	NA	NA	111679485	111676293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111676300_111679500
ES.8527.56	chr12	-	1772	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	123	-43	123	43	multi-exon	FALSE	canonical	0	0	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATCTGGCTCATTATCC	NA	False	NA	-24	True	NA	NA	NA	111679238	111676294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111677847_111679018
ES.8527.57	chr12	-	179	1	Intergenic	novelGene_7047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	111680499	111680320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111680300_111680500
ES.8527.58	chr12	-	511	1	Intergenic	novelGene_7049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAACTATTTCGATT	NA	False	NA	NA	False	NA	NA	NA	111687171	111686660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111686700_111687200
ES.8527.59	chr12	-	178	1	Intergenic	novelGene_7052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGGAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	111690577	111690399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111690400_111690600
ES.8527.6	chr12	-	2598	3	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	7921	junction_2	277.5	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638732	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111638408_111638663
ES.8527.60	chr12	-	160	1	Intergenic	novelGene_7053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTAGACAGGGTCTC	9505	False	NA	NA	False	NA	NA	NA	111703696	111703536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111703500_111703700
ES.8527.61	chr12	-	3258	1	Intergenic	novelGene_7054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAAACA	5679	False	NA	NA	False	NA	NA	NA	111707522	111704264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111704300_111707500
ES.8527.62	chr12	-	191	1	Intergenic	novelGene_7055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	3746	False	NA	NA	False	NA	NA	NA	111709455	111709264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111709300_111709500
ES.8527.63	chr12	-	177	1	Intergenic	novelGene_7056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAC	3544	False	NA	NA	False	NA	NA	NA	111709657	111709480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111709500_111709700
ES.8527.64	chr12	-	265	1	Intergenic	novelGene_7058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAGCATCCATC	NA	False	NA	NA	False	AATAGA	-36	NA	111720749	111720484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111720500_111720700
ES.8527.7	chr12	-	1407	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3556.47674199151	2526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638731	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111636176_111636258_111636436_111636595_111636704_111637300_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ES.8527.8	chr12	-	2411	4	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	7551	junction_2	380.13886351642	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638731	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111636176_111636258_111638014_111638199_111638408_111638663
ES.8527.9	chr12	-	2855	2	FSM	ENSMUSG00000001270.10	ENSMUST00000222705.2	2839	2	-17	1	-16	-1	multi-exon	FALSE	canonical	3	8476	junction_1	0	2526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	False	NA	-9	True	AATAAA	-20	NA	111638733	111635795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111636176_111636258
ES.8528.1	chr12	-	173	1	Intergenic	novelGene_7059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAGAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	111735589	111735416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_111735400_111735600
ES.8529.1	chr12	-	5236	6	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	-5	0	intron_retention	FALSE	canonical	3	57	junction_5	14.4554487996741	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111780312	111769625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111771225_111771348_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ES.8529.10	chr12	-	6328	6	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	396	-8	intron_retention	FALSE	canonical	3	69	junction_2	9.51630180269625	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTATCAACACTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	111779879	111769634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111771107_111771177_111771225_111771348_111774422_111776185_111776399_111777291_111777430_111778494
ES.8529.12	chr12	-	2491	7	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	3	-10	intron_retention	FALSE	canonical	3	57	junction_6	13.9094292558042	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAAAGTATCAACACTT	NA	False	NA	NA	False	AATAAA	-12	NA	111780283	111769636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ES.8529.2	chr12	-	6936	4	NIC	ENSMUSG00000021287.13	novel	2300	7	NA	NA	3	0	intron_retention	FALSE	canonical	3	87	junction_1	3.2659863237109	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	111780283	111769625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111774422_111776185_111776399_111777291_111777430_111778494
ES.8529.3	chr12	-	2462	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-40	0	-8	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780315	111769626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ES.8529.4	chr12	-	2433	8	NNC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	30.0183617277214	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780314	111769626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778626_111780258
ES.8529.6	chr12	-	5157	7	NIC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	2	0	intron_retention	FALSE	canonical	3	57	junction_6	13.2371531011099	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780305	111769626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111771107_111771177_111771225_111771348_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ES.8529.7	chr12	-	2315	8	NNC	ENSMUSG00000021287.13	novel	2422	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.3456280682596	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780285	111769626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111771107_111771177_111771225_111771348_111771445_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ES.8529.8	chr12	-	4063	7	ISM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	-36	0	-4	0	intron_retention	FALSE	canonical	3	68	junction_3	10.4947076609541	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780311	111769626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494
ES.853.1	chr1	-	8890	2	FSM	ENSMUSG00000055980.3	ENSMUST00000069799.3	9144	2	250	4	250	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGATGTGCATAGCAG	NA	False	NA	NA	False	ATTAAA	-19	NA	82268887	82210825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_82215326_82264497
ES.853.2	chr1	-	4508	2	FSM	ENSMUSG00000055980.3	ENSMUST00000069799.3	9144	2	859	3777	859	-3777	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCTTTTAAGAATTAAG	NA	False	NA	NA	False	TATAAA	-16	NA	82268278	82214598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_82215326_82264497
ES.853.3	chr1	-	6437	1	Genic_Genomic	ENSMUSG00000055980.3	novel	NA	NA	NA	NA	-412	-52291	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTGATTCTGCTTCCA	NA	False	NA	NA	False	AATAAA	-38	NA	82269549	82263112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_82263100_82269500
ES.8530.1	chr12	-	4565	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	-19	-157	-19	157	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGAAAGCTGACGCCT	1094	False	NA	NA	False	NA	NA	NA	111874563	111794733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ES.8530.10	chr12	-	4113	15	NIC	ENSMUSG00000021285.16	novel	4389	17	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	15.666974233484	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGAGTCCTTTGAGT	1118	False	NA	-3	True	AATAAA	-16	NA	111874539	111794893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111874295
ES.8530.11	chr12	-	4299	17	NNC	ENSMUSG00000021285.16	novel	4389	17	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	14.4523732912626	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGAGTCCTTTGAGT	1144	False	NA	-3	True	AATAAA	-16	NA	111874513	111794893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802102_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ES.8530.12	chr12	-	3403	7	ISM	ENSMUSG00000021285.16	ENSMUST00000220486.2	3343	13	9102	-432	9102	-5	intron_retention	FALSE	canonical	3	47	junction_4	7.65216018883266	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTGAGTCCTTTGA	7647	False	NA	-5	True	AATAAA	-14	NA	111802310	111794895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235
ES.8530.15	chr12	-	629	4	NNC	ENSMUSG00000021285.16	novel	320	3	NA	NA	35	2081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.9768406778059	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATCAAAA	1148	False	NA	NA	False	NA	NA	NA	111874509	111830367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111830515_111832848_111832969_111838719_111838868_111874295
ES.8530.16	chr12	-	1135	4	FSM	ENSMUSG00000021285.16	ENSMUST00000163747.4	770	4	-67	-298	3	298	multi-exon	FALSE	canonical	3	3	junction_1	22.573337271116	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAAAAGATTATGC	1116	False	NA	NA	False	AATAAA	-7	NA	111874541	111832150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111832772_111832848_111832969_111838719_111838868_111874295
ES.8530.2	chr12	-	4416	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	-26	-1	-26	1	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTCCTTTGAGTCTTG	1087	False	NA	1	True	AATAAA	-20	NA	111874570	111794889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ES.8530.6	chr12	-	5285	16	NIC	ENSMUSG00000021285.16	novel	4389	17	NA	NA	10	-1	intron_retention	FALSE	canonical	3	36	junction_6	8.24459418851731	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGAGTCCTTTGAGTCT	1123	False	NA	-1	True	AATAAA	-18	NA	111874534	111794891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ES.8530.7	chr12	-	923	3	NNC	ENSMUSG00000021285.16	novel	4389	17	NA	NA	80	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGAGTCCTTTGAGTC	1263	False	NA	-2	True	AATAAA	-17	NA	111874394	111794892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111795623_111838773_111838868_111874295
ES.8530.8	chr12	-	3220	2	NIC	ENSMUSG00000021285.16	novel	3343	13	NA	NA	12623	-3	intron_retention	FALSE	canonical	3	62	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTGAGTCCTTTGAGT	5359	False	NA	-3	True	AATAAA	-16	NA	111798789	111794893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111798061_111798736
ES.8531.1	chr12	-	1681	3	FSM	ENSMUSG00000113769.2	ENSMUST00000221669.2	1366	3	52	-367	-12	11	multi-exon	FALSE	canonical	2	6	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTGATGTTGACATA	NA	False	NA	NA	False	AATAAA	-26	NA	111910857	111908413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111909646_111910318_111910501_111910590
ES.8532.1	chr12	+	1389	1	Genic_Genomic	ENSMUSG00000113088.2	novel	NA	NA	NA	NA	-14	-2261	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTACTCCCGGGCTCAA	NA	False	NA	NA	False	AATAAA	-13	NA	111916936	111918325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_111916900_111918300
ES.8533.1	chr12	-	524	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	13	-171	3	171	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGTTCTGCTTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	111933398	111927637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ES.8533.2	chr12	-	427	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	-60	-1	-60	1	multi-exon	FALSE	canonical	3	2424	junction_1	129.659382828839	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCTTCCCCTGAGTAA	NA	False	NA	-6	True	AATAAA	-19	NA	111933471	111927807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ES.8533.3	chr12	-	5633	1	Genic_Genomic	ENSMUSG00000021290.7	novel	NA	NA	NA	NA	-30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933441	111927808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_111927800_111933400
ES.8533.4	chr12	-	5557	2	NNC	ENSMUSG00000021290.7	novel	440	2	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933422	111927808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111928189_111928245
ES.8533.5	chr12	-	364	4	NNC	ENSMUSG00000021290.7	novel	612	4	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1213.52855572317	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGCTTCCCCTGAGT	NA	False	NA	-8	True	AATAAA	-17	NA	111933420	111927809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111927973_111928866_111928891_111929663_111929788_111933367
ES.8533.8	chr12	-	384	3	NNC	ENSMUSG00000021290.7	novel	366	4	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1348	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGCTTCCCCTGAGT	NA	False	NA	-8	True	AATAAA	-17	NA	111933441	111927809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_111927982_111929659_111929788_111933357
ES.8533.9	chr12	-	262	2	NIC	ENSMUSG00000021290.7	novel	366	4	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGCTTCCCCTGAGT	NA	False	NA	-8	True	AATAAA	-17	NA	111933456	111927809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_111927973_111933357
ES.8534.1	chr12	+	4418	36	NNC	ENSMUSG00000054003.14	novel	4809	36	NA	NA	-35	90	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.34907845990688	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTGAAAGAAGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	111937957	112034874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960352_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ES.8534.2	chr12	+	8238	34	NNC	ENSMUSG00000054003.14	novel	4809	36	NA	NA	-29	-9	intron_retention	FALSE	canonical	0	0	junction_16	3.50547256795736	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTCTGATTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	111937963	112035279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992052_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ES.8534.3	chr12	+	4838	36	FSM	ENSMUSG00000054003.14	ENSMUST00000079009.11	4809	36	-25	-4	-25	4	multi-exon	FALSE	canonical	1	1	junction_4	3.2893147974517	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGCTCAGAGATGAC	NA	False	NA	NA	False	AATAAA	-28	NA	111937967	112035292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ES.8534.4	chr12	+	4772	35	NIC	ENSMUSG00000054003.14	novel	4809	36	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	3.36170166170107	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTTGCTCAGAGATG	NA	False	NA	NA	False	AATAAA	-26	NA	111937977	112035290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ES.8534.5	chr12	+	4701	33	NNC	ENSMUSG00000054003.14	novel	4809	36	NA	NA	9	90	intron_retention	FALSE	canonical	0	0	junction_8	3.5923910474084	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTGAAAGAAGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	111938001	112034874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992273_111992344_111992732_111993528_111993583_111997621_111997741_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ES.8535.1	chr12	-	2146	10	Antisense	novelGene_ENSMUSG00000054003.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111997690	111978927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_111979759_111979920_111979999_111980873_111980933_111982290_111982395_111989673_111989771_111991092_111991226_111991940_111992271_111992342_111992729_111993525_111993588_111997624
ES.8536.1	chr12	+	5548	12	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-36	0	intron_retention	TRUE	non_canonical	0	0	junction_4	9.20923000882114	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112073266	112093993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112073408_112078625_112080940_112082000_112082085_112082834_112082900_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112089474_112089723_112089883_112091243_112091331_112092745_112092846_112093095
ES.8536.10	chr12	+	1291	1	NIC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	5117	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112092702	112093993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112092700_112094000
ES.8536.2	chr12	+	3723	13	NIC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_3	7.88810637746616	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112073268	112093993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112073408_112078625_112078735_112079414_112079499_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087701_112088183_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ES.8536.3	chr12	+	2583	15	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	7.91182272144101	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112073268	112093993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093078
ES.8536.4	chr12	+	4517	13	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-19	2	intron_retention	FALSE	canonical	0	0	junction_8	6.90963497990708	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCTGGATGGGTCT	NA	False	NA	4	True	AATAAA	-18	NA	112073283	112093995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112073408_112078625_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089380_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ES.8536.5	chr12	+	2531	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	193	-2	3	2	multi-exon	FALSE	canonical	2	5	junction_3	6.52467842666814	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCCTGGATGGGTCT	NA	False	NA	4	True	AATAAA	-18	NA	112073305	112093995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ES.8536.6	chr12	+	2622	15	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.36407440461696	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112073324	112093993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112073408_112078625_112078735_112079414_112079527_112080701_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ES.8536.8	chr12	+	3539	13	NNC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	273	-1	intron_retention	FALSE	canonical	1	1	junction_8	7.94206452308774	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTTGGCCTGGATGGG	NA	False	NA	1	True	AATAAA	-15	NA	112079646	112093992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112088390_112088558_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ES.8536.9	chr12	+	5810	5	NIC	ENSMUSG00000037686.7	novel	2722	15	NA	NA	-918	-1	intron_retention	FALSE	canonical	3	18	junction_2	3.53553390593274	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTTGGCCTGGATGGG	NA	False	NA	1	True	AATAAA	-15	NA	112085469	112093992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112086501_112087298_112089474_112089723_112091331_112092745_112092846_112093095
ES.8537.1	chr12	+	6936	16	FSM	ENSMUSG00000021294.8	ENSMUST00000128402.3	6918	16	-18	0	-18	0	multi-exon	FALSE	canonical	1	1	junction_13	3.04776785350999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTCTGACTTTCCGGG	2008	False	NA	10	True	AATAAA	-19	NA	112112623	112148181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112112841_112113147_112113391_112123681_112124108_112129784_112129976_112135201_112135392_112139004_112139218_112139774_112139869_112140171_112140435_112140534_112140719_112140868_112141032_112141207_112141371_112141919_112144834_112145576_112145783_112145913_112145935_112146228_112146380_112146884
ES.8537.2	chr12	+	5160	8	ISM	ENSMUSG00000021294.8	ENSMUST00000128402.3	6918	16	27830	2	-5116	-2	3prime_fragment	FALSE	canonical	1	1	junction_5	4.1057451037714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTCTGACTTTCCG	9689	False	NA	8	True	AATAAA	-17	NA	112140471	112148179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112140719_112140868_112141032_112141207_112141371_112141919_112144834_112145576_112145783_112145913_112145935_112146228_112146380_112146884
ES.8538.1	chr12	+	140	1	Intergenic	novelGene_7063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	112340286	112340426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112340300_112340400
ES.8539.1	chr12	-	2474	5	NNC	ENSMUSG00000054013.7	novel	2380	4	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.77263412660235	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTGTGGATGAGGA	NA	False	NA	-11	True	AATAAA	-19	NA	112477638	112466623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112468357_112469675_112469755_112470967_112471106_112471211_112471275_112477177
ES.8539.2	chr12	-	2400	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	-23	3	-23	-3	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGCTGTGTGGATGAG	NA	False	NA	-13	True	AATAAA	-17	NA	112477629	112466625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
ES.8539.3	chr12	-	2101	5	NNC	ENSMUSG00000054013.7	novel	2380	4	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.54950975679639	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGCTGTGTGGATGAG	NA	False	NA	-13	True	AATAAA	-17	NA	112477564	112466625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112467479_112467712_112468357_112469675_112469755_112470967_112471106_112477177
ES.854.1	chr1	+	3587	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	49	0	49	0	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294221	82423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.10	chr1	+	3431	6	NIC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-45	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	79.0407489843056	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294317	82423084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82355281_82355426_82420583
ES.854.11	chr1	+	2975	6	NIC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-43	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	77.724127528072	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGTGTTGCTCGAGT	NA	False	NA	12	True	AATAAA	-18	NA	82294319	82423085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82294370_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.12	chr1	+	2037	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	149	1450	-41	-1450	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCACCTCCTCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	82294321	82421637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.13	chr1	+	4008	7	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-41	-9029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	74.0015014862687	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTGTTGTAGTGAGT	NA	False	NA	NA	False	AATAAA	-1	NA	82294321	82414058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82411033
ES.854.14	chr1	+	3538	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.8495632963898	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294328	82423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82357297_82357356_82420583
ES.854.15	chr1	+	3376	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-28	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	64.057372243759	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294334	82423084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318039_82318393_82318487_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.16	chr1	+	3358	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	163	115	-27	-115	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTATGGAGTGGGAT	NA	False	NA	NA	False	TATAAA	-12	NA	82294335	82422972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.17	chr1	+	3393	7	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-27	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	73.9581338025477	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294335	82423084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318116_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.18	chr1	+	3614	7	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.9625657240204	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294341	82423084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294518_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420581
ES.854.19	chr1	+	3492	7	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	73.9581338025477	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294344	82423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294398_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.2	chr1	+	3730	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.3815485684254	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294288	82423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82312492_82312703_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.20	chr1	+	3097	1	FSM	ENSMUSG00000026142.16	ENSMUST00000187475.2	3089	1	-15	7	-15	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCATTAACTGCTGTT	NA	False	NA	NA	False	ATTAAA	-40	NA	82294347	82297444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294300_82297400
ES.854.21	chr1	+	1497	1	FSM	ENSMUSG00000026142.16	ENSMUST00000187475.2	3089	1	1334	258	1334	-258	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGAAGTAATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	82295696	82297193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82295700_82297200
ES.854.22	chr1	+	2989	1	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82304114	82307103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_82304100_82307100
ES.854.23	chr1	+	309	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTCTGTGATATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	82309505	82309814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_82309500_82309800
ES.854.24	chr1	+	2932	5	ISM	ENSMUSG00000026142.16	ENSMUST00000140020.2	3687	7	3674	2	3674	-2	3prime_fragment	FALSE	canonical	3	176	junction_2	13.3603892158874	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGTGTTGCTCGAGT	3775	False	NA	12	True	AATAAA	-18	NA	82320443	82423085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.25	chr1	+	4560	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82389588	82394148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_82389600_82394100
ES.854.26	chr1	+	5464	1	Genic_Genomic	ENSMUSG00000026142.16	novel	NA	NA	NA	NA	104669	3815	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAAGACGTGCCCATA	NA	False	NA	NA	False	ATTAAA	-13	NA	82421438	82426902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_82421400_82426900
ES.854.27	chr1	+	450	1	Antisense	novelGene_ENSMUSG00000067158.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATCAAGCCAATCATA	NA	False	NA	NA	False	AATAAA	-14	NA	82426861	82427311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_82426900_82427300
ES.854.3	chr1	+	2867	5	NIC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-69	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	83.1004663043475	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTGTGTTGCTCGAG	NA	False	NA	11	True	AATAAA	-17	NA	82294293	82423084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82294370_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.4	chr1	+	1206	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	128	2302	-62	-2302	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCTTGTCTGCCATGA	NA	False	NA	NA	False	TTTAAA	-31	NA	82294300	82420785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.5	chr1	+	3564	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-54	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	88.1848707464689	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGTGTTGCTCGAGT	NA	False	NA	12	True	AATAAA	-18	NA	82294308	82423085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82356686_82356753_82420583
ES.854.6	chr1	+	2519	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-49	-1186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	89.3815485684254	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGCTTTCAGAAGATT	NA	False	NA	NA	False	TTTAAA	-16	NA	82294313	82421901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82312492_82312703_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.7	chr1	+	6546	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	141	-3051	-49	3051	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTTATAAGCAGTCATT	NA	False	NA	NA	False	NA	NA	NA	82294313	82426138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.8	chr1	+	3053	6	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-49	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	75.1223002842698	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCAGTGTGTTGCTCGA	NA	False	NA	10	True	AATAAA	-16	NA	82294313	82423083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82318039_82318254_82346019_82346102_82348054_82348112_82355281_82355426_82420583
ES.854.9	chr1	+	3676	8	NNC	ENSMUSG00000026142.16	novel	3636	7	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	88.037097931752	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294313	82423087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82294370_82312521_82312703_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ES.8540.1	chr12	-	2170	2	NNC	ENSMUSG00000054013.7	novel	521	4	NA	NA	0	-10095	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAATAATGCTGATGTA	NA	False	NA	NA	False	AATAAA	-27	NA	112483181	112478266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112480318_112483062
ES.8540.2	chr12	-	4805	2	Genic_Genomic	ENSMUSG00000054013.7	novel	521	4	NA	NA	3	-10132	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGCAATAAAACAAAAGGA	NA	False	NA	NA	False	ATTAAA	-24	NA	112483178	112478303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_112480006_112480075
ES.8541.1	chr12	-	3737	1	Intergenic	novelGene_7064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTGAGAGAGCTGTTTT	5915	False	NA	NA	False	NA	NA	NA	112505253	112501516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112501500_112505300
ES.8542.1	chr12	-	172	1	Intergenic	novelGene_7065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAATAGCCTTTGGCCG	NA	False	NA	NA	False	NA	NA	NA	112528415	112528243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112528200_112528400
ES.8543.1	chr12	+	155	1	Intergenic	novelGene_7066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGGCTTGGG	NA	False	NA	NA	False	NA	NA	NA	112537086	112537241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112537100_112537200
ES.8544.1	chr12	+	177	1	Intergenic	novelGene_7067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	112539839	112540016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112539800_112540000
ES.8544.2	chr12	+	421	1	Intergenic	novelGene_7068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATAACATAGACAAA	NA	False	NA	NA	False	NA	NA	NA	112539839	112540260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112539800_112540300
ES.8545.1	chr12	+	3493	19	NNC	ENSMUSG00000037679.10	novel	4001	23	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.88561808316413	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGTATTTAGACCA	NA	False	NA	11	True	AATAAA	-19	NA	112555149	112581991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112555330_112566427_112566828_112567762_112567879_112567956_112568117_112568611_112568646_112569514_112569657_112572209_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577843_112578471_112581328
ES.8545.2	chr12	+	5137	10	ISM	ENSMUSG00000037679.10	ENSMUST00000222275.2	2795	15	2314	1	2314	-1	intron_retention	FALSE	canonical	1	1	junction_5	1.49897084035912	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTGGTATTTAGACC	NA	False	NA	10	True	AATAAA	-18	NA	112573404	112581990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577843
ES.8545.3	chr12	+	4835	9	ISM	ENSMUSG00000037679.10	ENSMUST00000222275.2	2795	15	2902	151	2902	-151	intron_retention	FALSE	canonical	1	1	junction_4	1.57619002661481	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGTGACCAGACCACT	NA	False	NA	NA	False	AATAAA	-21	NA	112573992	112581840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577843
ES.8545.4	chr12	+	3425	2	NNC	ENSMUSG00000037679.10	novel	2795	15	NA	NA	4123	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGTGGTATTTAGACC	NA	False	NA	10	True	AATAAA	-18	NA	112575213	112581990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112575287_112578638
ES.8546.1	chr12	-	6713	1	Antisense	novelGene_ENSMUSG00000037679.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCATGGTCTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	112586445	112579732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_112579700_112586400
ES.8547.1	chr12	+	1768	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	24	-15	-8	-6	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACACCTGTCTTGACTTC	NA	False	NA	NA	False	AATAAA	-34	NA	112586502	112607788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ES.8547.2	chr12	+	4896	10	NNC	ENSMUSG00000011148.15	novel	1819	13	NA	NA	2	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	27.398296784046	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTCTTGACTTCGTC	NA	False	NA	NA	False	AATAAA	-37	NA	112586512	112607791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112586745_112594734_112594838_112598687_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602219_112602258_112604717_112606045_112606196_112607391
ES.8547.3	chr12	+	4528	11	ISM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	9107	-18	9059	-3	3prime_fragment	FALSE	canonical	3	69	junction_4	9.672641831475	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTCTTGACTTCGTC	6340	False	NA	NA	False	AATAAA	-37	NA	112595585	112607791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ES.8547.4	chr12	+	1700	10	ISM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	12315	-20	-7012	-1	3prime_fragment	FALSE	canonical	3	69	junction_3	9.59681016963964	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTTGACTTCGTCCT	9548	False	NA	NA	False	AATAAA	-39	NA	112598793	112607793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ES.8547.5	chr12	+	1657	3	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14478	3622	-4801	-3463	internal_fragment	FALSE	canonical	3	75	junction_2	12.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	1615	False	NA	NA	False	NA	NA	NA	112601004	112604172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112601162_112601864_112602020_112602827
ES.8547.6	chr12	+	1072	4	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	15984	21	-3295	0	3prime_fragment	FALSE	canonical	3	82	junction_1	2.82842712474619	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCGAGAGGTCATTAC	3121	False	NA	NA	False	AATAAA	-19	NA	112602510	112607773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112602953_112604618_112604717_112606045_112606196_112607391
ES.8548.1	chr12	+	179	1	Intergenic	novelGene_7069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAGAAA	4200	False	NA	NA	False	NA	NA	NA	112608457	112608636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112608500_112608600
ES.8549.1	chr12	+	950	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	-21	-5	-21	1	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTCCCTTCCATCTGT	6834	False	NA	22	True	AATAAA	-22	NA	112611091	112615584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ES.8549.2	chr12	+	717	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	-121	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	784.630273865766	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGACTCCCTCCCTTCC	7022	False	NA	16	True	AATAAA	-16	NA	112611279	112615578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112611483_112613271_112613464_112614258_112614416_112615413
ES.8549.3	chr12	+	649	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	-98	1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	808.851174334452	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTCCCTCCCTTCCAT	7045	False	NA	18	True	AATAAA	-18	NA	112611302	112615580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112611519_112613357_112613467_112614258_112614416_112615413
ES.8549.4	chr12	+	538	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	-98	-107	-98	-1	multi-exon	FALSE	canonical	3	90	junction_1	805	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGACTCCCTCCCTTCC	7045	False	NA	16	True	AATAAA	-16	NA	112611302	112615578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112611519_112614258_112614416_112615413
ES.8549.6	chr12	+	1724	3	ISM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	199	-1	-89	1	intron_retention	FALSE	canonical	3	1739	junction_2	34.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACTCCCTCCCTTCCAT	7054	False	NA	18	True	AATAAA	-18	NA	112611311	112615580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112611519_112613271_112613467_112614258
ES.8549.8	chr12	+	3247	2	FSM	ENSMUSG00000064326.14	ENSMUST00000222368.2	401	2	-2850	4	-66	0	multi-exon	FALSE	canonical	3	1700	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7077	False	NA	17	True	AATAAA	-17	NA	112611334	112615579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112614416_112615413
ES.8549.9	chr12	+	4245	1	FSM	ENSMUSG00000064326.14	ENSMUST00000222729.2	1317	1	-2931	3	-66	0	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7077	False	NA	17	True	AATAAA	-17	NA	112611334	112615579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112611300_112615600
ES.855.1	chr1	-	5257	3	Genic_Genomic	ENSMUSG00002075724.1	novel	121	1	NA	NA	-29774	67	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATACGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	82404312	82374350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_82375439_82399976_82401370_82401536
ES.855.2	chr1	-	6109	1	FSM	ENSMUSG00002075724.1	ENSMUST00020182327.1	121	1	-5921	-67	-5921	67	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATACGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	82380459	82374350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_82374400_82380500
ES.855.3	chr1	-	6110	2	Genic_Genomic	ENSMUSG00002075724.1	novel	121	1	NA	NA	-24484	67	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATCCATACGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	82399022	82374350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_82380321_82398882
ES.8550.1	chr12	-	2726	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	-32	-4	-32	4	multi-exon	TRUE	canonical	3	224	junction_13	42.5045768506691	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTCTGGTGTGGAGCG	NA	False	NA	4	True	AATAAA	-23	NA	112640742	112620250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.10	chr12	-	2594	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-491	-7	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	94.3623257487333	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112638489	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112638301
ES.8550.11	chr12	-	2948	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	8	-7	intron_retention	FALSE	canonical	3	224	junction_12	44.2401118895511	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640702	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.12	chr12	-	3022	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	10	-7	intron_retention	FALSE	canonical	3	224	junction_12	43.9361911058399	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640700	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.13	chr12	-	3093	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-29	-7	intron_retention	FALSE	canonical	3	224	junction_12	44.1616349335031	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640669	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.14	chr12	-	2802	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-43	-7	intron_retention	FALSE	canonical	3	224	junction_12	43.8997437350151	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640753	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.15	chr12	-	2517	14	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	52	-7	combination_of_known_junctions	FALSE	canonical	3	3	junction_13	96.6788130843996	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112641266	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112641155
ES.8550.16	chr12	-	3905	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-20	-7	intron_retention	FALSE	canonical	3	224	junction_12	42.145581025773	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640660	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.17	chr12	-	2633	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	100.479972392865	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640669	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623417_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.18	chr12	-	2943	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	13	-7	intron_retention	FALSE	canonical	3	224	junction_12	44.206193005053	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640697	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.19	chr12	-	3044	12	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-6	-7	intron_retention	FALSE	canonical	3	224	junction_11	45.4699973736202	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640646	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621664_112622935_112623024_112623210_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.2	chr12	-	3373	11	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	9	-1	intron_retention	FALSE	canonical	3	224	junction_10	47.9509124000785	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTGCTTTCTGGTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	112640701	112620255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621664_112622935_112623024_112623210_112623426_112623501_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.20	chr12	-	2626	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	97.3818811136382	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640703	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112621162_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.21	chr12	-	4412	9	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	12	-7	intron_retention	FALSE	canonical	3	224	junction_8	53.0599601865663	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640698	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.22	chr12	-	2704	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	101.087284330199	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640703	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623856_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.23	chr12	-	3754	10	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	8	-7	intron_retention	FALSE	canonical	3	224	junction_9	50.250729372509	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640702	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112624170_112624831_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.24	chr12	-	3879	8	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	30	-7	intron_retention	FALSE	canonical	3	224	junction_7	56.3226854647324	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640680	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112624170_112624831_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.25	chr12	-	2521	14	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	124	-7	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	97.1941264935905	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640254	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640139
ES.8550.27	chr12	-	2767	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-13	-7	intron_retention	FALSE	canonical	3	224	junction_12	44.0734866129539	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640723	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.28	chr12	-	2752	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	13	-7	intron_retention	FALSE	canonical	3	224	junction_12	43.5858029893017	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	False	NA	-7	True	AATAAA	-12	NA	112640697	112620261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.29	chr12	-	2719	14	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-12	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	98.9791084286247	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTTGTGGTTTGCTTT	NA	False	NA	-9	True	AATAAA	-10	NA	112640722	112620263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628769_112637949_112638089_112640433
ES.8550.30	chr12	-	2546	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	9	-9	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	104.387465988765	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTTGTGGTTTGCTTT	NA	False	NA	-9	True	AATAAA	-10	NA	112640701	112620263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.31	chr12	-	3522	8	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	23	374	intron_retention	FALSE	canonical	3	224	junction_7	53.627589609705	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAAGGGAAATGACAAC	NA	False	NA	NA	False	NA	NA	NA	112640687	112621902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112623024_112623210_112623631_112623701_112623828_112624100_112624170_112624831_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.32	chr12	-	1679	12	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	23	2609	23	-587	5prime_fragment	FALSE	canonical	3	224	junction_11	43.8138436177652	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGCCCATCTCTGG	NA	False	NA	NA	False	TATAAA	-14	NA	112640687	112622863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.4	chr12	-	3742	10	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	11	-5	intron_retention	FALSE	canonical	3	224	junction_9	50.6968720879915	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	NA	False	NA	-5	True	AATAAA	-14	NA	112640699	112620259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112624170_112624831_112624898_112624979_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.5	chr12	-	4332	11	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	-20	-5	intron_retention	FALSE	canonical	3	224	junction_10	45.6553392277398	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	NA	False	NA	-5	True	AATAAA	-14	NA	112640660	112620259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112623024_112623210_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.6	chr12	-	4554	7	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	19	-5	intron_retention	FALSE	canonical	3	224	junction_6	60.4951788712676	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	NA	False	NA	-5	True	AATAAA	-14	NA	112640691	112620259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.8	chr12	-	4020	12	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	8	-5	intron_retention	FALSE	canonical	3	224	junction_11	43.7118664978661	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGTTTGCTTTCTGG	NA	False	NA	-5	True	AATAAA	-14	NA	112640702	112620259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112623024_112623210_112623426_112623501_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8550.9	chr12	-	3024	12	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	9	-6	intron_retention	FALSE	canonical	3	224	junction_11	45.8322489228089	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGGTTTGCTTTCTG	NA	False	NA	-6	True	AATAAA	-13	NA	112640701	112620260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623631_112623701_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ES.8551.1	chr12	+	3688	2	FSM	ENSMUSG00000037638.6	ENSMUST00000169593.2	3478	2	-211	1	-199	-1	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGGCTGTGATGATTCT	135	False	NA	NA	False	AATAAA	-15	NA	112645062	112649180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112645380_112645809
ES.8551.2	chr12	+	3509	2	FSM	ENSMUSG00000037638.6	ENSMUST00000173942.2	485	2	-247	-2777	-197	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGGCTGTGATGATTCTC	137	False	NA	NA	False	AATAAA	-16	NA	112645064	112649181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112645380_112645987
ES.8552.1	chr12	-	2604	1	FSM	ENSMUSG00000103898.2	ENSMUST00000195528.2	2603	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTTTTGTCATGGTG	8094	False	NA	NA	False	NA	NA	NA	112660023	112657419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112657400_112660000
ES.8553.1	chr12	+	2199	2	Intergenic	novelGene_7070	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCTTCTGGATGTTT	NA	False	NA	NA	False	GATAAA	-11	NA	112664422	112666866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112666028_112666272
ES.8554.1	chr12	+	6944	19	NIC	ENSMUSG00000072825.12	novel	5395	18	NA	NA	660	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	29.7890215090918	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGCCTCGGCCCTCTTCT	7954	False	NA	32	True	AATAAA	-32	NA	112687548	112713027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112688060_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.10	chr12	+	6544	19	NNC	ENSMUSG00000072825.12	novel	6566	20	NA	NA	7	0	intron_retention	FALSE	non_canonical	0	0	junction_4	35.9749998927582	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTGCCGCCTCGGCCC	9020	False	NA	26	True	AATAAA	-26	NA	112688614	112713021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709980_112710103_112710193_112710503_112710598_112710956_112711009_112711098_112711536_112711600
ES.8554.11	chr12	+	6461	20	NNC	ENSMUSG00000072825.12	novel	6566	20	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_4	31.6940883361087	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCGCCTCGGCCCTCTT	9021	False	NA	30	True	AATAAA	-30	NA	112688615	112713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098_112711535_112711600
ES.8554.12	chr12	+	7887	18	NIC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-5	2	intron_retention	FALSE	canonical	0	0	junction_4	22.7634138560239	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCCGCCTCGGCCCTC	9028	False	NA	28	True	AATAAA	-28	NA	112688622	112713023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.13	chr12	+	6840	18	NIC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	19	1	intron_retention	FALSE	canonical	0	0	junction_4	24.5535922572149	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCCGCCTCGGCCCT	9052	False	NA	27	True	AATAAA	-27	NA	112688646	112713022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.14	chr12	+	6936	21	NNC	ENSMUSG00000072825.12	novel	6566	20	NA	NA	22	-44	intron_retention	FALSE	canonical	0	0	junction_1	38.6244417435385	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTTGTTCTAATAAAT	9055	False	NA	-18	True	NA	NA	NA	112688649	112712977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112690704_112690917_112691057_112691190_112691928_112692103_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.16	chr12	+	6418	18	ISM	ENSMUSG00000072825.12	ENSMUST00000222711.2	6566	20	2425	14	0	-14	3prime_fragment	FALSE	canonical	0	0	junction_3	24.4541800192774	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGCAGCACACCAGTGAC	NA	False	NA	12	True	AATAAA	-12	NA	112691052	112713007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.18	chr12	+	2732	3	FSM	ENSMUSG00000072825.12	ENSMUST00000221125.2	417	3	-557	-1758	126	0	multi-exon	FALSE	canonical	3	86	junction_1	1	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTGCCGCCTCGGCCC	NA	False	NA	26	True	AATAAA	-26	NA	112709840	112713021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112710598_112710956_112711009_112711098
ES.8554.2	chr12	+	6690	19	FSM	ENSMUSG00000072825.12	ENSMUST00000101018.11	6641	19	-32	-17	-32	17	multi-exon	FALSE	canonical	0	0	junction_4	23.8627764261712	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGGGATGGTGTTGG	8981	False	NA	48	True	NA	NA	NA	112688575	112713043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.3	chr12	+	4091	16	NNC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-20	-3	intron_retention	FALSE	canonical	0	0	junction_4	31.4222850855885	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGACTGCCGCCTCGG	8993	False	NA	23	True	AATAAA	-23	NA	112688587	112713018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112702782_112707312_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.4	chr12	+	6556	19	NIC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-20	0	intron_retention	FALSE	canonical	0	0	junction_4	27.3297761913022	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCGCCTCGGCCCTCTTC	8993	False	NA	31	True	AATAAA	-31	NA	112688587	112713026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.5	chr12	+	6468	18	NNC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-19	-1	intron_retention	FALSE	canonical	0	0	junction_4	36.7840419739952	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCGCCTCGGCCCTCTT	8994	False	NA	30	True	AATAAA	-30	NA	112688588	112713025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709986_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8554.6	chr12	+	6634	19	NNC	ENSMUSG00000072825.12	novel	6641	19	NA	NA	-18	-12	intron_retention	FALSE	canonical	0	0	junction_2	29.6895978790926	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGCACACCAGTGACTG	8995	False	NA	14	True	AATAAA	-14	NA	112688589	112713009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112688817_112691057_112691190_112697792_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ES.8555.1	chr12	+	178	1	Intergenic	novelGene_7071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGGAAACACT	NA	False	NA	NA	False	NA	NA	NA	112715889	112716067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112715900_112716100
ES.8556.1	chr12	+	2375	10	NIC	ENSMUSG00000052160.8	novel	1982	11	NA	NA	3	-3	intron_retention	FALSE	canonical	3	9	junction_4	2.87174399629335	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTGTCTGTGTTCTC	4283	False	NA	NA	False	AATAAA	-42	NA	112727091	112735421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112727218_112728959_112729044_112729830_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
ES.8556.2	chr12	+	1912	11	NNC	ENSMUSG00000052160.8	novel	1982	11	NA	NA	3	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	4.92848861214064	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTGTCTGTGTTCTC	4283	False	NA	NA	False	AATAAA	-42	NA	112727091	112735421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112727218_112728959_112729044_112729894_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
ES.8556.3	chr12	+	1744	11	NNC	ENSMUSG00000052160.8	novel	1982	11	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	4.92848861214064	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTGTCTGTGTTCTC	4283	False	NA	NA	False	AATAAA	-42	NA	112727091	112735421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112735091
ES.8556.4	chr12	+	1976	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	3	3	3	-3	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTCTGTCTGTGTTCTC	4283	False	NA	NA	False	AATAAA	-42	NA	112727091	112735421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
ES.8557.1	chr12	-	6131	2	NNC	ENSMUSG00000118667.1	novel	11349	7	NA	NA	17891	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTTCGCCAAGGTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	112748386	112738622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112742334_112745966
ES.8557.2	chr12	-	5193	1	Genic_Genomic	ENSMUSG00000118667.1	novel	NA	NA	NA	NA	22459	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCGGTTCGCCAAGGTC	NA	False	NA	NA	False	AATAAA	-18	NA	112743818	112738625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_112738600_112743800
ES.8557.3	chr12	-	5632	2	NNC	ENSMUSG00000118667.1	novel	11349	7	NA	NA	18902	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTCCGGTTCGCCAA	NA	False	NA	NA	False	AATAAA	-14	NA	112747375	112738629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112742286_112745399
ES.8557.4	chr12	-	7396	2	NNC	ENSMUSG00000118667.1	novel	11349	7	NA	NA	18692	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCAGTTGTCCGGTTCGCC	NA	False	NA	NA	False	AATAAA	-12	NA	112747585	112738631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112742291_112743848
ES.8558.1	chr12	+	1942	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	11	7	11	-7	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTGTGTTTTTGTTG	3912	False	NA	10	True	ATTAAA	-12	NA	112772567	112779865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
ES.8559.1	chr12	-	5646	6	NNC	ENSMUSG00000047832.10	novel	1994	2	NA	NA	-6	8166	intron_retention	FALSE	canonical	0	0	junction_1	185.2	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTGCCCTGCCTATGT	9640	False	NA	NA	False	NA	NA	NA	112793015	112775682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112778593_112778911_112780464_112781268_112781402_112781978_112782197_112784989_112785733_112792925
ES.8559.2	chr12	-	2138	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	-138	-6	-138	-2	multi-exon	FALSE	canonical	3	463	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTAGGAGCCTTTTT	9474	False	NA	-2	True	ATTAAA	-17	NA	112793181	112783850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112785733_112792925
ES.8559.3	chr12	-	3887	1	NIC	ENSMUSG00000047832.10	novel	2425	2	NA	NA	5257	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTTAGGAGCCTTTTT	9994	False	NA	-2	True	ATTAAA	-17	NA	112787737	112783850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112783800_112787700
ES.8559.4	chr12	-	2096	3	NNC	ENSMUSG00000047832.10	novel	1994	2	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGTGTTAGGAGCCTT	9661	False	NA	-5	True	ATTAAA	-14	NA	112792994	112783853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112785733_112786381_112786530_112792925
ES.8559.5	chr12	-	2313	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	104	8	89	0	multi-exon	FALSE	canonical	3	30	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATGTGTTAGGAGC	9750	False	NA	-8	True	ATTAAA	-11	NA	112792905	112783856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112785733_112792468
ES.856.1	chr1	+	6945	1	Antisense	novelGene_ENSMUSG00000067158.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	82476707	82483652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_82476700_82483700
ES.8560.1	chr12	-	1708	1	Intergenic	novelGene_7072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAAGCACAGAACCTCA	7262	False	NA	NA	False	NA	NA	NA	112796322	112794614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112794600_112796300
ES.8561.1	chr12	-	543	2	Intergenic	novelGene_7073	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGTGATCTCTCCAGA	NA	False	NA	NA	False	AGTAAA	-12	NA	112841705	112840689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112841039_112841511
ES.8562.1	chr12	-	5201	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	-77	-18	-77	18	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGGTTCTGTTCCTTTT	NA	False	NA	1	True	NA	NA	NA	112893473	112871420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.10	chr12	-	4292	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	-52	866	-52	592	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATTGCTATTTTTGTAA	NA	False	NA	NA	False	TATAAA	-43	NA	112893448	112872304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.12	chr12	-	4102	25	NIC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	4	572	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	8.70344759276461	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGGAGTATTCTCG	NA	False	NA	NA	False	TATAAA	-23	NA	112893392	112872324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.13	chr12	-	4423	24	NNC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	9	572	intron_retention	FALSE	canonical	0	0	junction_10	9.03846014621655	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGGAGTATTCTCG	NA	False	NA	NA	False	TATAAA	-23	NA	112893387	112872324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876341_112876784_112876902_112877009_112877124_112877235_112877397_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.14	chr12	-	4413	25	NIC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	-34	570	intron_retention	FALSE	canonical	3	8	junction_24	7.34657894684473	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACAACGGAGTATTCT	NA	False	NA	NA	False	TATAAA	-21	NA	112893430	112872326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.15	chr12	-	3700	25	NNC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	-277	570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	8.26597779387828	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAACAACGGAGTATTCT	NA	False	NA	NA	False	TATAAA	-21	NA	112892345	112872326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892154
ES.8562.2	chr12	-	4902	27	NNC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	-23	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	8.75716105952638	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTGGGTTCTGTTCC	NA	False	NA	-3	True	NA	NA	NA	112893419	112871424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038_112893138_112893378
ES.8562.4	chr12	-	4989	25	NIC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_16	8.70344759276461	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGGCCTCCCTGTTCT	NA	False	NA	-17	True	ATTAAA	-36	NA	112893393	112871438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.6	chr12	-	3024	13	NNC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	-588	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	10.077477638554	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTTTTGGCCTCCCTGT	NA	False	NA	-20	True	ATTAAA	-33	NA	112877900	112871441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876199_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745
ES.8562.7	chr12	-	5937	9	NIC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	250	-6	intron_retention	FALSE	canonical	3	18	junction_7	5.47579902845238	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAACGTTTTGGCCTCCC	NA	False	NA	-23	True	ATTAAA	-30	NA	112879327	112871444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976
ES.8562.8	chr12	-	5082	26	NNC	ENSMUSG00000002799.7	novel	5106	26	NA	NA	27	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	8.67769554662988	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAACTTAAACGTTTTGG	NA	False	NA	-29	True	ATTAAA	-24	NA	112893369	112871450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875658_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8562.9	chr12	-	4391	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	-34	749	-34	709	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCGTCGCTGTTTACA	NA	False	NA	NA	False	NA	NA	NA	112893430	112872187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ES.8563.1	chr12	-	4622	5	NNC	ENSMUSG00000002804.5	novel	1241	5	NA	NA	-1	0	intron_retention	TRUE	non_canonical	0	0	junction_1	112.008928215567	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	8853	False	NA	NA	False	ATTAAA	-15	NA	112905738	112897910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112900235_112900298_112900750_112900804_112902480_112902898_112902943_112905610
ES.8563.2	chr12	-	840	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	-36	437	-36	1	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCGCTGGCTTTGAGCA	8811	False	NA	-5	True	AATAAA	-20	NA	112905780	112898347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ES.8563.3	chr12	-	776	5	NNC	ENSMUSG00000002804.5	novel	1241	5	NA	NA	-20	1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	85.8527081692826	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCGCTGGCTTTGAGCA	8827	False	NA	-5	True	AATAAA	-20	NA	112905764	112898347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112898671_112901975_112902166_112902414_112902480_112902898_112902943_112905610
ES.8563.4	chr12	-	4303	3	NIC	ENSMUSG00000002804.5	novel	945	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	222	junction_1	2	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	8853	False	NA	-6	True	AATAAA	-19	NA	112905738	112898348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112902480_112902898_112902943_112905610
ES.8563.5	chr12	-	571	4	FSM	ENSMUSG00000002804.5	ENSMUST00000221497.2	355	4	-23	-193	-9	-3	multi-exon	FALSE	canonical	2	11	junction_1	100.422441051125	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTCCGCTGGCTTTG	8838	False	NA	-9	True	AATAAA	-16	NA	112905753	112898351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112898671_112902414_112902480_112902898_112902943_112905610
ES.8563.6	chr12	-	4210	4	NNC	ENSMUSG00000002804.5	novel	945	4	NA	NA	3	-3	intron_retention	TRUE	non_canonical	0	0	junction_1	105.607238809131	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATGTCCGCTGGCTTTG	8850	False	NA	-9	True	AATAAA	-16	NA	112905741	112898351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112900274_112900366_112902480_112902898_112902943_112905610
ES.8563.7	chr12	-	771	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	-15	-22	-8	-4	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATGTCCGCTGGCTTT	8839	False	NA	-10	True	AATAAA	-15	NA	112905752	112898352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
ES.8563.8	chr12	-	873	6	NNC	ENSMUSG00000002804.5	novel	1241	5	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.810596761602	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGATGTCCGCTGGCTTT	8865	False	NA	-10	True	AATAAA	-15	NA	112905726	112898352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112898671_112901702_112901795_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ES.8564.1	chr12	+	2050	4	NIC	ENSMUSG00000002803.15	novel	1975	5	NA	NA	2	6	intron_retention	FALSE	canonical	3	10	junction_1	18.2086670449969	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940108	112942556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112940133_112940295_112940770_112940872_112940992_112941123
ES.8564.2	chr12	+	2105	4	ISM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	8	-6	3	6	intron_retention	FALSE	canonical	3	10	junction_1	18.3726850393609	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940109	112942556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872
ES.8564.3	chr12	+	2329	2	ISM	ENSMUSG00000002803.15	ENSMUST00000220567.2	832	3	-73	-1292	14	2	intron_retention	FALSE	canonical	3	52	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGAACCAAATGTAGAT	NA	False	NA	NA	False	AATAAA	-11	NA	112940120	112942552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112940770_112940872
ES.8564.4	chr12	+	2217	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223368.2	691	3	-288	-1238	-13	2	multi-exon	FALSE	canonical	3	45	junction_1	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAGAACCAAATGTAGAT	NA	False	NA	NA	False	AATAAA	-11	NA	112940156	112942552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112940603_112940678_112940770_112940872
ES.8564.5	chr12	+	2091	4	FSM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	-13	7	-13	-7	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATGTAGATAAGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	112940156	112942558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ES.8564.6	chr12	+	4282	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223368.2	691	3	-286	-3305	-11	2054	multi-exon	FALSE	canonical	3	45	junction_1	3.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGTGGTATGCAGCC	NA	False	NA	NA	False	CATAAA	-26	NA	112940158	112944619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112940603_112940678_112940770_112940872
ES.8564.7	chr12	+	1992	3	FSM	ENSMUSG00000002803.15	ENSMUST00000223287.2	800	3	-24	-1168	-7	6	multi-exon	FALSE	canonical	0	0	junction_1	22	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAAATGTAGATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	112940162	112942556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112940603_112940872_112940992_112941123
ES.8565.1	chr12	+	390	1	Intergenic	novelGene_7074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTCAAGACAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	112953715	112954105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112953700_112954100
ES.8566.1	chr12	-	3265	19	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	5	4458	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	51.75205011744	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGTATCAATGACTAT	NA	False	NA	NA	False	NA	NA	NA	112964047	112919246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112919410_112922966_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.10	chr12	-	2725	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-52	58	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	37.0119217677383	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCGTGGCCTGGCCTGCT	NA	False	NA	0	True	AATGAA	-33	NA	112964376	112923646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.11	chr12	-	2404	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	6	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.4883535799955	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTCTGGATCCCACT	NA	False	NA	-17	True	AATGAA	-16	NA	112964046	112923663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.12	chr12	-	3484	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	278	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	60.0959844228381	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTCTGGATCCCACT	8137	False	NA	-17	True	AATGAA	-16	NA	112951402	112923663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937084_112937242_112943304_112943378_112946646_112946820_112947352_112947470_112950078
ES.8566.13	chr12	-	4044	17	NIC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	39	40	combination_of_known_junctions	FALSE	canonical	2	8	junction_14	36.4485939372152	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGGTCTGGATCCCAC	NA	False	NA	-18	True	AATGAA	-15	NA	112964285	112923664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.14	chr12	-	2379	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-2	39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	49.8811043128964	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGGGTCTGGATCCCA	NA	False	NA	-19	True	AATGAA	-14	NA	112964054	112923665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924760_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.16	chr12	-	3738	16	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-34	2	intron_retention	FALSE	non_canonical	0	0	junction_13	39.194330655792	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGTGTTTATGTGTAA	NA	False	NA	-1	True	NA	NA	NA	112964086	112923702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.17	chr12	-	4052	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.8145287231593	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964072	112923704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926673_112926909_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.18	chr12	-	3817	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	47.4087528179133	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964049	112923704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927915_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.19	chr12	-	3221	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	52.3875629076677	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964060	112923704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112950173_112950756_112951713_112956683_112956765_112963792
ES.8566.2	chr12	-	3241	19	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-4	4454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	52.5324120994616	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTATGTAGTATCAATGA	NA	False	NA	NA	False	NA	NA	NA	112964056	112919250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112919410_112922966_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927863_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.20	chr12	-	3830	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	53.9852048597576	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCTGTGTGTTTATGTG	NA	False	NA	-4	True	NA	NA	NA	112964037	112923705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927915_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.21	chr12	-	2966	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-11	-3	intron_retention	FALSE	non_canonical	0	0	junction_14	37.9800523301377	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964063	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.23	chr12	-	2321	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	43.7162920071134	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964064	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924760_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.24	chr12	-	3858	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	55.714546813589	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964046	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924760_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112943822_112943924_112950078_112951713_112956683_112956765_112963792
ES.8566.25	chr12	-	3714	16	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	15	-3	intron_retention	FALSE	non_canonical	0	0	junction_13	51.8587826055851	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964037	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927863_112929348_112929639_112932884_112932978_112933061_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.26	chr12	-	4827	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	49.3712719235537	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964293	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924760_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112947470_112950078_112951713_112956683_112956765_112963792
ES.8566.27	chr12	-	2543	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	63	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.7771718494008	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964261	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925389_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.28	chr12	-	3911	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_14	52.8704102198631	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964052	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112947352_112947470_112950078_112951713_112956683_112956765_112963792
ES.8566.29	chr12	-	3817	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-23	-3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_14	45.6205477279701	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCTGTGTGTTTATG	NA	False	NA	-6	True	NA	NA	NA	112964075	112923707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.3	chr12	-	6396	16	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	51	4454	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	55.7930302297897	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTATGTAGTATCAATGA	7910	False	NA	NA	False	NA	NA	NA	112951629	112919250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927863_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538
ES.8566.30	chr12	-	6137	15	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-3	-4	intron_retention	FALSE	non_canonical	0	0	junction_12	49.3686672508227	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTAGCTGTGTGTTTAT	NA	False	NA	-7	True	NA	NA	NA	112964055	112923708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.31	chr12	-	2983	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	90	-6	intron_retention	FALSE	non_canonical	0	0	junction_14	53.5090164715256	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACTAGCTGTGTGTTT	NA	False	NA	-9	True	NA	NA	NA	112964234	112923710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927863_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.32	chr12	-	4658	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.35940766954	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAACTAGCTGTGTGTTT	NA	False	NA	-9	True	NA	NA	NA	112964045	112923710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112930556_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.33	chr12	-	7201	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-11	-8	intron_retention	FALSE	canonical	1	2	junction_1	42.9963661255227	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAACTAGCTGTGTGT	NA	False	NA	-11	True	NA	NA	NA	112964063	112923712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924760_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112951713_112956683_112956765_112963792
ES.8566.34	chr12	-	2335	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	38.0952752976009	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAAACTAGCTGTGTGT	NA	False	NA	-11	True	NA	NA	NA	112964056	112923712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943392_112951524_112951713_112956683_112956765_112963792
ES.8566.35	chr12	-	2337	17	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	38.0952752976009	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGGGAAACTAGCTGTG	NA	False	NA	-14	True	NA	NA	NA	112964054	112923715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943399_112951524_112951713_112956683_112956765_112963792
ES.8566.36	chr12	-	3992	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-22	-29	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	59.6403291249427	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGATATTTTTGCCCAG	NA	False	NA	-32	True	NA	NA	NA	112964074	112923733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927915_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112937469_112937649_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.37	chr12	-	2548	19	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-6	-79	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	45.8316834719885	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTGGACCATTGTAC	NA	False	NA	-82	True	NA	NA	NA	112964330	112923783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112950078_112950173_112951626_112951713_112956683_112956765_112963792
ES.8566.38	chr12	-	3658	6	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	46	-673	intron_retention	FALSE	non_canonical	0	0	junction_3	50.2927430152701	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCCAAGCACTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	112964278	112934429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.39	chr12	-	3313	1	FSM	ENSMUSG00000113519.2	ENSMUST00000222117.2	401	1	-1977	-935	-1977	935	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCCAAGCACTTTTGTA	4384	False	NA	NA	False	NA	NA	NA	112937742	112934429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112934400_112937700
ES.8566.4	chr12	-	2759	20	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-12	4453	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	56.7298111061904	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTATGTAGTATCAATG	NA	False	NA	NA	False	NA	NA	NA	112964064	112919251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112919410_112922986_112923399_112923896_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.40	chr12	-	2316	7	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	0	-673	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	48.363209157375	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCCAAGCACTTTTGTA	NA	False	NA	NA	False	NA	NA	NA	112964052	112934429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.42	chr12	-	3936	3	FSM	ENSMUSG00000011158.9	ENSMUST00000222247.2	687	3	-287	-2962	21	-2104	multi-exon	FALSE	canonical	3	100	junction_2	19.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAACAACAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112964303	112948368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_112951713_112956683_112956765_112963792
ES.8566.5	chr12	-	7711	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	39	4453	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.4509444276489	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTATGTAGTATCAATG	NA	False	NA	NA	False	NA	NA	NA	112964285	112919251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926909_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8566.6	chr12	-	4211	19	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-20	4449	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57.1277807492409	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACAACTATGTAGTATC	NA	False	NA	NA	False	NA	NA	NA	112964072	112919255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112919410_112922966_112923399_112923896_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112950078_112951713_112956683_112956765_112963792
ES.8566.7	chr12	-	4530	10	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-6776	3395	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	60.2091006615207	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCTATGGTGCTGTCT	9216	False	NA	NA	False	AATACA	-13	NA	112932910	112920309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112922747_112922882_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884
ES.8566.8	chr12	-	2613	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	-3	267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	37.0119217677383	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATAGTCTGGGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	112964055	112923437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ES.8567.1	chr12	+	167	1	Intergenic	novelGene_7075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	112966433	112966600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112966400_112966600
ES.8568.1	chr12	-	139	1	Intergenic	novelGene_7076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	112966755	112966616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112966600_112966800
ES.8569.1	chr12	-	2860	1	Intergenic	novelGene_7077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGAGCTGGCTCAATG	NA	False	NA	NA	False	AATAAA	-14	NA	112977906	112975046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_112975000_112977900
ES.857.1	chr1	+	1673	7	NIC	ENSMUSG00000026150.15	novel	1894	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTCTATGGAAAGA	NA	False	NA	11	True	AATAAA	-11	NA	82702610	82730109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.10	chr1	+	1551	6	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	195.340318418907	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGCAATGTCTATGGAA	NA	False	NA	8	True	AATAAA	-8	NA	82702640	82730106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82728240_82728326_82729305
ES.857.11	chr1	+	1612	7	NNC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	178.166978484292	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGCAATGTCTATGGAA	NA	False	NA	8	True	AATAAA	-8	NA	82702640	82730106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708861_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.13	chr1	+	1787	9	NNC	ENSMUSG00000026150.15	novel	1894	9	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	200.990671425318	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702640	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82720561_82720647_82724803_82724864_82728240_82728326_82729305
ES.857.14	chr1	+	2735	9	NNC	ENSMUSG00000026150.15	novel	1894	9	NA	NA	3	50	intron_retention	FALSE	canonical	1	1	junction_5	200.796499907244	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTTCTGTCTTTGCA	NA	False	NA	14	True	TATAAA	-14	NA	82702642	82729499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82720561_82720647_82723244_82724864_82728240_82728326_82729305
ES.857.15	chr1	+	1804	8	NIC	ENSMUSG00000026150.15	novel	2087	11	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	203.733319086797	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAGCAATGTCTATGG	NA	False	NA	6	True	AATAAA	-6	NA	82702646	82730104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82705787_82705960_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.16	chr1	+	2027	10	NIC	ENSMUSG00000026150.15	novel	2087	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	212.42201183284	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702646	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82705787_82705960_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ES.857.17	chr1	+	1949	9	NNC	ENSMUSG00000026150.15	novel	2087	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	229.71936003524	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702661	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82704948_82705058_82705787_82705960_82706936_82707158_82708833_82709004_82711148_82711305_82713139_82713229_82728240_82728326_82729305
ES.857.19	chr1	+	2733	7	NIC	ENSMUSG00000026150.15	novel	2087	11	NA	NA	33	0	intron_retention	FALSE	canonical	2	3	junction_2	174.900606694837	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702701	82730111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82705787_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.20	chr1	+	6275	8	NIC	ENSMUSG00000026150.15	novel	2087	11	NA	NA	58	50	intron_retention	FALSE	canonical	3	30	junction_5	179.351894444459	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTTTCTGTCTTTGCA	NA	False	NA	14	True	TATAAA	-14	NA	82702726	82729499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82719538_82724864_82728240_82728326_82729305
ES.857.21	chr1	+	6058	3	FSM	ENSMUSG00000026150.15	ENSMUST00000162794.2	607	3	-4945	-506	0	-2	multi-exon	FALSE	canonical	3	223	junction_1	152.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCTATGGAAAGATTTA	763	False	NA	15	True	AATAAA	-15	NA	82719698	82730113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82724864_82728240_82728326_82729305
ES.857.22	chr1	+	7306	2	FSM	ENSMUSG00000026150.15	ENSMUST00000162573.3	2360	2	-4287	-659	2124	0	multi-exon	FALSE	canonical	3	528	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	2887	False	NA	10	True	AATAAA	-10	NA	82721822	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82728326_82729305
ES.857.23	chr1	+	7137	1	FSM	ENSMUSG00000026150.15	ENSMUST00000188333.2	3918	1	3276	-6495	-1669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	4039	False	NA	13	True	AATAAA	-13	NA	82722974	82730111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82723000_82730100
ES.857.3	chr1	+	1659	7	NNC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	190.166374525046	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702624	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82704948_82705062_82706942_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
ES.857.4	chr1	+	1709	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-27	-37	-5	0	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702633	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ES.857.5	chr1	+	1669	7	NNC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.986384327181	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702638	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82702806_82705093_82705228_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.7	chr1	+	1861	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	30	3	1	0	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGTCTATGGAAAG	NA	False	NA	10	True	AATAAA	-10	NA	82702640	82730108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ES.857.8	chr1	+	1035	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	1	52	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCTGTCTTTGCATC	NA	False	NA	16	True	TATAAA	-16	NA	82702640	82729501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ES.857.9	chr1	+	1095	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	-20	570	1	52	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCTGTCTTTGCATC	NA	False	NA	16	True	TATAAA	-16	NA	82702640	82729501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ES.8570.1	chr12	+	5616	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-142	6	-142	-6	multi-exon	TRUE	canonical	3	64	junction_11	15.2637802253402	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAATGTGTTGGGGCC	1237	False	NA	22	True	AATAAA	-34	NA	112977985	113038015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.10	chr12	+	5635	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-109	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	25.4025436709149	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGATTTCTCTGA	1270	False	NA	9	True	AATAAA	-21	NA	112978018	113038002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035092
ES.8570.11	chr12	+	5779	26	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-109	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5937972124358	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTCTCTGAATGTGTT	1270	False	NA	16	True	AATAAA	-28	NA	112978018	113038009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_112995783_112995900_112996109_112996196_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.12	chr12	+	5670	25	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-107	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	31.4712997560211	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGATTTCTCTGA	1272	False	NA	9	True	AATAAA	-21	NA	112978020	113038002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113008585_113008688_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.14	chr12	+	5547	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-100	6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	23.8944591816622	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAATGTGTTGGG	1279	False	NA	19	True	AATAAA	-31	NA	112978027	113038012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014558_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.16	chr12	+	5922	23	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-93	-12	intron_retention	FALSE	non_canonical	0	0	junction_15	32.138260198633	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGCCCACTGCTGTGAT	1286	False	NA	1	True	AATAAA	-13	NA	112978034	113037994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025572_113026066_113026218_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113034402_113035157
ES.8570.17	chr12	+	5220	22	NIC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-91	-105	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	31.9570289714215	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTTTTGGGAGCAGA	1288	False	NA	-92	True	AATAAA	-19	NA	112978036	113037901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_113007845_113007934_113009097_113009188_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.18	chr12	+	3415	25	NIC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	29.1747310279899	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1288	False	NA	14	True	AATAAA	-30	NA	112978036	113035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_112986761_112986869_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.19	chr12	+	5298	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-89	-114	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_21	24.5989379948117	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAAATAGCTTTTTTT	1290	False	NA	NA	False	AATAAA	-10	NA	112978038	113037892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033818_113033904_113034287_113034402_113035157
ES.8570.2	chr12	+	3399	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-133	2214	-133	49	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTTGCTCTTGTGAA	1246	False	NA	63	True	AATACA	-21	NA	112977994	113035807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.20	chr12	+	3423	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-85	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.5796417827871	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATCTTTCTAATGCTCT	1294	False	NA	15	True	AATAAA	-31	NA	112978042	113035759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027329_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.21	chr12	+	3089	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-80	2471	-80	-207	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGTTCTTGCCTTTG	1299	False	NA	NA	False	AAGAAA	-41	NA	112978047	113035550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.22	chr12	+	5546	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	-78	-2245	-78	-3	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGTGATTTCTCTGAA	1301	False	NA	10	True	AATAAA	-22	NA	112978049	113038003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.23	chr12	+	6296	23	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-69	9	-69	6	intron_retention	FALSE	canonical	3	64	junction_11	15.2543179092358	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAATGTGTTGGG	1310	False	NA	19	True	AATAAA	-31	NA	112978058	113038012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
ES.8570.24	chr12	+	5654	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-64	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.5796417827871	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCTGAATGTGTTGG	1315	False	NA	18	True	AATAAA	-30	NA	112978063	113038011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027329_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.25	chr12	+	5423	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-63	120	-63	-105	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTTTTGGGAGCAGA	1316	False	NA	-92	True	AATAAA	-19	NA	112978064	113037901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.26	chr12	+	5549	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-63	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	25.4654219023641	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAATGTGTTGGG	1316	False	NA	19	True	AATAAA	-31	NA	112978064	113038012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025453_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.28	chr12	+	3345	25	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.357454146591	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1317	False	NA	14	True	AATAAA	-30	NA	112978065	113035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_112979847_112979914_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.29	chr12	+	3288	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	-62	-3	-62	3	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTCTAATGCTCTCA	1317	False	NA	17	True	AATAAA	-33	NA	112978065	113035761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.3	chr12	+	3306	23	NNC	ENSMUSG00000021143.11	novel	3101	23	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	31.9469149042725	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1265	False	NA	14	True	AATAAA	-30	NA	112978013	113035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035092
ES.8570.30	chr12	+	2900	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-59	2639	-59	365	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACAAAGAAACAGTC	1320	False	NA	NA	False	NA	NA	NA	112978068	113035382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.32	chr12	+	5519	23	NIC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-55	-105	intron_retention	FALSE	canonical	3	64	junction_11	15.5942879985531	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTTTTGGGAGCAGA	1324	False	NA	-92	True	AATAAA	-19	NA	112978072	113037901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.34	chr12	+	3178	25	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	35.7378330111569	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTTGGGGCCATGC	1357	False	NA	26	True	AATAAA	-38	NA	112978105	113038019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033818_113033904_113034287_113034402_113037228_113037539_113037647
ES.8570.35	chr12	+	3271	24	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	25.0735779261537	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1358	False	NA	14	True	AATAAA	-30	NA	112978106	113035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035124
ES.8570.38	chr12	+	5322	25	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-1	-109	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_22	33.8832759468279	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGCTTTTTTTGGGAG	1378	False	NA	-96	True	AATAAA	-15	NA	112978126	113037897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_112986761_112986869_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033818_113033904_113034287_113034402_113035157
ES.8570.39	chr12	+	5338	24	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.1490671932651	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCTGAATGTGTTG	1378	False	NA	17	True	AATAAA	-29	NA	112978126	113038010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009192_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033818_113033904_113034287_113034402_113035157
ES.8570.4	chr12	+	3351	23	NIC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-111	-360	intron_retention	FALSE	canonical	3	64	junction_11	15.1128673761989	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTTAAGTATGAATGTG	1268	False	NA	NA	False	AAGAAA	-1	NA	112978016	113035397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113034402_113035157
ES.8570.40	chr12	+	3116	23	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	1	3119	1	-115	5prime_fragment	FALSE	canonical	3	64	junction_11	15.2543179092358	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGGACCTTGTGAGGT	1380	False	NA	NA	False	AATACA	-12	NA	112978128	113034902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
ES.8570.41	chr12	+	5499	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_23	25.0735779261537	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	1380	False	NA	15	True	AATAAA	-27	NA	112978128	113038008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035124
ES.8570.42	chr12	+	6626	23	NIC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	3	0	intron_retention	FALSE	canonical	2	6	junction_1	30.3353161341476	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATTTCTCTGAATGT	1382	False	NA	13	True	AATAAA	-25	NA	112978130	113038006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_112986761_112986869_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
ES.8570.43	chr12	+	6243	23	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	10	2	intron_retention	FALSE	canonical	0	0	junction_14	25.9339991912082	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGGGCCATGCGGCT	1389	False	NA	30	True	AATAAA	-42	NA	112978137	113038023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025453_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
ES.8570.44	chr12	+	5763	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	11	-108	intron_retention	FALSE	non_canonical	0	0	junction_15	35.2604674828306	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCTTTTTTTGGGAGC	1390	False	NA	-95	True	AATAAA	-16	NA	112978138	113037898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_112986761_112986869_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024826_113025259_113025365_113025468_113025576_113026057_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.46	chr12	+	5386	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-9	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	25.4025436709149	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAATAGCTTTTTTTGG	1395	False	NA	-99	True	AATAAA	-12	NA	112978143	113037894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035108
ES.8570.47	chr12	+	5756	25	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-9	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	31.4523173055482	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTGTGATTTCTCTG	1395	False	NA	8	True	AATAAA	-20	NA	112978143	113038001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113013778_113013924_113013969_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.48	chr12	+	5338	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	19	-2134	-6	-114	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAAATAGCTTTTTTT	1398	False	NA	NA	False	AATAAA	-10	NA	112978146	113037892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.49	chr12	+	6201	23	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	2	7	intron_retention	FALSE	canonical	2	7	junction_17	29.262597061383	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGAATGTGTTGGGG	1407	False	NA	20	True	AATAAA	-32	NA	112978155	113038013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027454_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287
ES.8570.5	chr12	+	3303	24	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-111	4	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_17	29.1312134873207	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTCTAATGCTCTCAA	1268	False	NA	18	True	AATAAA	-34	NA	112978016	113035762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014558_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027454_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.50	chr12	+	12271	18	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	3	-4	intron_retention	FALSE	canonical	1	4	junction_16	32.4474555280104	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGATTTCTCTGA	1408	False	NA	9	True	AATAAA	-21	NA	112978156	113038002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025576_113026066_113032643_113032901_113033044_113033818_113033904_113034287
ES.8570.51	chr12	+	5541	25	NIC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	6	-5	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	33.2220799653216	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCTGTGATTTCTCTG	1411	False	NA	8	True	AATAAA	-20	NA	112978159	113038001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_112986761_112986869_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.52	chr12	+	3057	23	NIC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	24.5759070353786	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1413	False	NA	14	True	AATAAA	-30	NA	112978161	113035758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_113007845_113007934_113009097_113009188_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.53	chr12	+	3622	24	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	18	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3455835723099	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTTCTAATGCTCTCA	1423	False	NA	17	True	AATAAA	-33	NA	112978171	113035761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978743_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.54	chr12	+	5811	22	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	25	-4	intron_retention	FALSE	canonical	0	0	junction_19	26.2888196923393	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGATTTCTCTGA	1430	False	NA	9	True	AATAAA	-21	NA	112978178	113038002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024826_113025259_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033680_113033904_113034287_113034402_113035157
ES.8570.55	chr12	+	1513	1	Intergenic	novelGene_7078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	112997276	112998789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_112997300_112998800
ES.8570.56	chr12	+	4892	21	NNC	ENSMUSG00000021143.11	novel	3101	23	NA	NA	-15091	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	31.7113544333887	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	NA	False	NA	15	True	AATAAA	-27	NA	113010733	113038008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033818_113033909_113034287_113034402_113035157
ES.8570.57	chr12	+	4706	2	NNC	ENSMUSG00000021143.11	novel	609	6	NA	NA	-12653	4448	intron_retention	FALSE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	ATTAAA	-5	NA	113013171	113017923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113013924_113013969
ES.8570.58	chr12	+	4880	20	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	35297	123	-12400	-108	3prime_fragment	FALSE	canonical	3	64	junction_7	13.9942607943419	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCTTTTTTTGGGAGC	NA	False	NA	-95	True	AATAAA	-16	NA	113013424	113037898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.6	chr12	+	3937	10	NNC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-110	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	35.9076318446561	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAATGTGTTGGG	1269	False	NA	19	True	AATAAA	-31	NA	112978017	113038012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014558_113033818_113033904_113034287_113034402_113035157
ES.8570.60	chr12	+	4571	17	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-9953	-111	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_16	34.1686991265398	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATAGCTTTTTTTGGG	1308	False	NA	-98	True	AATAAA	-13	NA	113015871	113037895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035128
ES.8570.61	chr12	+	4843	14	NNC	ENSMUSG00000021143.11	novel	3101	23	NA	NA	-2434	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	31.1953190237587	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGATTTCTCTGAAT	11	False	NA	11	True	AATAAA	-23	NA	113023390	113038004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113023434_113023702_113023781_113024248_113024392_113024692_113025365_113025468_113025576_113026057_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.63	chr12	+	4804	10	NIC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-1049	-7	intron_retention	FALSE	canonical	3	14	junction_1	31.5524255098646	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACTGCTGTGATTTCTC	1396	False	NA	6	True	AATAAA	-18	NA	113024775	113037999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113024832_113025259_113025365_113025468_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.64	chr12	+	5068	4	NIC	ENSMUSG00000021143.11	novel	4035	9	NA	NA	-370	-114	intron_retention	FALSE	canonical	3	85	junction_3	14.522013940528	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAAATAGCTTTTTTT	7672	False	NA	NA	False	AATAAA	-10	NA	113031051	113037892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.65	chr12	+	3925	5	NIC	ENSMUSG00000021143.11	novel	4035	9	NA	NA	29	2	intron_retention	FALSE	canonical	3	85	junction_4	12.5896783120142	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	8071	False	NA	15	True	AATAAA	-27	NA	113031450	113038008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113031740_113032599_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.66	chr12	+	5902	1	FSM	ENSMUSG00000021143.11	ENSMUST00000221382.2	726	1	-2181	-2995	689	6	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGAATGTGTTGGG	8731	False	NA	19	True	AATAAA	-31	NA	113032110	113038012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113032100_113038000
ES.8570.8	chr12	+	4185	21	NIC	ENSMUSG00000021143.11	novel	5480	24	NA	NA	-110	4	intron_retention	FALSE	canonical	3	64	junction_11	16.0822883943797	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTCTAATGCTCTCAA	1269	False	NA	18	True	AATAAA	-34	NA	112978017	113035762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113033044_113033676_113033904_113034287_113034402_113035157
ES.8570.9	chr12	+	5559	24	NNC	ENSMUSG00000021143.11	novel	3223	24	NA	NA	-110	2	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	29.2276767610236	227	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTCTCTGAATGTGT	1269	False	NA	15	True	AATAAA	-27	NA	112978017	113038008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014558_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ES.8571.1	chr12	-	1410	2	Antisense	novelGene_ENSMUSG00000021143.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAACTGTGGGACCCAGT	7107	False	NA	NA	False	NA	NA	NA	113007136	113005675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_113005892_113005942
ES.8572.1	chr12	+	2774	20	NNC	ENSMUSG00000021144.15	novel	717	3	NA	NA	-2327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	157.733689798682	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	6996	False	NA	24	True	ATTAAA	-41	NA	113059570	113100826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113059723_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.10	chr12	+	2874	20	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-62	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	159.640333284168	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCCCACCAAGCCCT	9261	False	NA	13	True	ATTAAA	-30	NA	113061835	113100815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095159_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.11	chr12	+	2478	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-59	217	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGAGTCTTTTTTAGCT	9264	False	NA	NA	False	NA	NA	NA	113061838	113100506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.13	chr12	+	5356	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-41	-2	intron_retention	FALSE	canonical	3	192	junction_4	124.052226974372	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAAGCCCTTCTGCGTC	9282	False	NA	21	True	ATTAAA	-38	NA	113061856	113100823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.15	chr12	+	5240	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-40	-1	intron_retention	FALSE	canonical	3	30	junction_13	156.655673373166	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAAGCCCTTCTGCGTCT	9283	False	NA	22	True	ATTAAA	-39	NA	113061857	113100824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.16	chr12	+	2727	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-40	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	139.782823173382	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9283	False	NA	19	True	ATTAAA	-36	NA	113061857	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.17	chr12	+	3053	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-40	-10	intron_retention	FALSE	canonical	3	225	junction_3	88.912966270023	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9283	False	NA	-19	True	NA	NA	NA	113061857	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.19	chr12	+	3468	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-40	0	intron_retention	FALSE	canonical	3	30	junction_11	141.258211630125	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCCTTCTGCGTCTT	9283	False	NA	23	True	ATTAAA	-40	NA	113061857	113100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.2	chr12	+	3242	21	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-89	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	199.583434933864	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9234	False	NA	19	True	ATTAAA	-36	NA	113061808	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113063714_113064058_113064154_113064231_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.20	chr12	+	5086	20	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-40	0	intron_retention	FALSE	canonical	3	59	junction_17	151.39789991847	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9283	False	NA	24	True	ATTAAA	-41	NA	113061857	113100826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113099449_113099900_113100053_113100137
ES.8572.21	chr12	+	2790	19	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-40	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	143.985424502398	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9283	False	NA	19	True	ATTAAA	-36	NA	113061857	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075749_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.22	chr12	+	2781	19	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-39	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	162.345928859593	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9284	False	NA	-19	True	NA	NA	NA	113061858	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096985_113099900_113100053_113100137
ES.8572.24	chr12	+	2670	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-38	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	151.44249882324	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9285	False	NA	-19	True	NA	NA	NA	113061859	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.25	chr12	+	2634	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-38	-10	combination_of_known_splicesites	FALSE	canonical	1	18	junction_7	140.769953934765	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9285	False	NA	-19	True	NA	NA	NA	113061859	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.26	chr12	+	8170	12	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-38	-2	intron_retention	FALSE	canonical	3	225	junction_3	97.1680830501269	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAAGCCCTTCTGCGTC	9285	False	NA	21	True	ATTAAA	-38	NA	113061859	113100823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084707_113086736_113086855_113090394_113091841_113093739_113093815_113094153_113095088_113095192_113095383_113095507_113099449_113099900_113100053_113100137
ES.8572.27	chr12	+	2751	19	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-37	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	163.3100512507	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9286	False	NA	-19	True	NA	NA	NA	113061860	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084605_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.28	chr12	+	2762	20	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-37	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	158.834205098087	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9286	False	NA	-19	True	NA	NA	NA	113061860	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094526_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.3	chr12	+	2912	21	NIC	ENSMUSG00000021144.15	novel	2826	21	NA	NA	-82	4	combination_of_known_junctions	FALSE	canonical	3	59	junction_17	171.479699964748	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9241	False	NA	28	True	ATTAAA	-45	NA	113061815	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.30	chr12	+	6107	16	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-32	-10	intron_retention	FALSE	canonical	3	59	junction_13	141.212117830667	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9291	False	NA	-19	True	NA	NA	NA	113061865	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084707_113086736_113086855_113090394_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113099449_113099900_113100053_113100137
ES.8572.32	chr12	+	2826	21	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-32	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	178.86458565071	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9291	False	NA	-19	True	NA	NA	NA	113061865	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097208_113099416_113099449_113099900_113100053_113100137
ES.8572.33	chr12	+	2847	20	NNC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-32	-4	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	169.93775950407	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9291	False	NA	19	True	ATTAAA	-36	NA	113061865	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097115_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.34	chr12	+	1875	13	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-31	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	169.56062501523	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9292	False	NA	-19	True	NA	NA	NA	113061866	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094590_113100189
ES.8572.35	chr12	+	2695	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-31	-10	combination_of_known_splicesites	FALSE	canonical	1	6	junction_16	149.296806168719	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9292	False	NA	-19	True	NA	NA	NA	113061866	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099900_113100053_113100137
ES.8572.36	chr12	+	5138	18	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-31	-11	intron_retention	FALSE	canonical	3	30	junction_12	143.835257551405	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAACAAAAACAAAGAAAAA	9292	False	NA	-20	True	NA	NA	NA	113061866	113100782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.37	chr12	+	2769	20	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-31	-4	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	152.530402037451	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9292	False	NA	19	True	ATTAAA	-36	NA	113061866	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.38	chr12	+	5226	18	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-31	-2	intron_retention	FALSE	canonical	3	225	junction_3	94.5392029776747	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAAGCCCTTCTGCGTC	9292	False	NA	21	True	ATTAAA	-38	NA	113061866	113100823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.4	chr12	+	2817	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-74	4	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9249	False	NA	28	True	ATTAAA	-45	NA	113061823	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.41	chr12	+	5768	17	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-31	11	intron_retention	FALSE	canonical	3	30	junction_13	162.822756394799	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCATAAAAAGGAAAACCC	9292	False	NA	2	True	ATTAAA	-19	NA	113061866	113100804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095383_113095507_113095598_113096804_113100053_113100137
ES.8572.42	chr12	+	3094	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-30	-10	intron_retention	FALSE	canonical	3	192	junction_4	115.188519661155	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9293	False	NA	-19	True	NA	NA	NA	113061867	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.43	chr12	+	2713	20	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-30	-10	combination_of_known_splicesites	FALSE	canonical	1	18	junction_8	189.674235966495	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9293	False	NA	-19	True	NA	NA	NA	113061867	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.44	chr12	+	2838	21	NNC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-30	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	209.702521444068	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9293	False	NA	-19	True	NA	NA	NA	113061867	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113064154_113064231_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.46	chr12	+	2851	21	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-28	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	184.181405141779	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9295	False	NA	-19	True	NA	NA	NA	113061869	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113064154_113064231_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.47	chr12	+	2386	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-28	203	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	139.782823173382	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCGAGACACCGAGGAGG	9295	False	NA	NA	False	NA	NA	NA	113061869	113100492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.48	chr12	+	5551	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-28	4	intron_retention	FALSE	canonical	3	30	junction_12	154.738846857031	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9295	False	NA	28	True	ATTAAA	-45	NA	113061869	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.49	chr12	+	4933	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-28	-10	intron_retention	FALSE	canonical	3	30	junction_12	168.83165148517	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9295	False	NA	-19	True	NA	NA	NA	113061869	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113099449_113099900_113100053_113100137
ES.8572.5	chr12	+	2866	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-72	-5	-72	4	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9251	False	NA	28	True	ATTAAA	-45	NA	113061825	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.50	chr12	+	2594	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-26	-138	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTTTTTGTAGATGA	9297	False	NA	NA	False	TTTAAA	-10	NA	113061871	113100655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.52	chr12	+	2861	22	NNC	ENSMUSG00000021144.15	novel	2826	21	NA	NA	-25	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	197.872711552968	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9298	False	NA	-19	True	NA	NA	NA	113061872	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113097806_113097860_113099416_113099449_113099900_113100053_113100137
ES.8572.53	chr12	+	5269	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-25	-4	intron_retention	FALSE	canonical	3	192	junction_4	120.772423984375	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9298	False	NA	19	True	ATTAAA	-36	NA	113061872	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.55	chr12	+	2809	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-23	11	intron_retention	FALSE	canonical	3	225	junction_3	94.7985297653647	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCATAAAAAGGAAAACCC	9300	False	NA	2	True	ATTAAA	-19	NA	113061874	113100804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.56	chr12	+	2795	20	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	159.532644997645	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9301	False	NA	19	True	ATTAAA	-36	NA	113061875	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084654_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.57	chr12	+	2491	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-21	319	-21	217	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGAGTCTTTTTTAGCT	9302	False	NA	NA	False	NA	NA	NA	113061876	113100506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.58	chr12	+	2642	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	-19	166	-19	-134	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTTTGTAGATGAACTT	9304	False	NA	NA	False	TTTAAA	-14	NA	113061878	113100659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.59	chr12	+	2877	20	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-16	-4	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_9	151.486521529099	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	9307	False	NA	19	True	ATTAAA	-36	NA	113061881	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091411_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.6	chr12	+	2848	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109726.8	2775	20	-71	-2	-71	2	multi-exon	FALSE	canonical	3	59	junction_16	163.105730200924	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTCTGCGTCTTTTG	9252	False	NA	26	True	ATTAAA	-43	NA	113061826	113100828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.60	chr12	+	2807	20	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-14	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	177.052913198349	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCATAAAAAGGAAAACCC	9309	False	NA	2	True	ATTAAA	-19	NA	113061883	113100804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113064154_113064231_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.61	chr12	+	2933	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-12	-10	intron_retention	FALSE	canonical	3	192	junction_4	123.910755919436	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9311	False	NA	-19	True	NA	NA	NA	113061885	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.62	chr12	+	2905	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-6	4	intron_retention	FALSE	canonical	3	192	junction_4	120.666001635164	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	9317	False	NA	28	True	ATTAAA	-45	NA	113061891	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.63	chr12	+	5233	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-5	-10	intron_retention	FALSE	canonical	3	30	junction_12	160.476884471961	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9318	False	NA	-19	True	NA	NA	NA	113061892	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.65	chr12	+	2773	19	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-4	-10	intron_retention	FALSE	canonical	3	30	junction_12	156.033877692168	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9319	False	NA	-19	True	NA	NA	NA	113061893	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.68	chr12	+	5758	18	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	13	-10	intron_retention	FALSE	canonical	3	193	junction_3	100.250896327828	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	9336	False	NA	-19	True	NA	NA	NA	113061910	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.69	chr12	+	7071	15	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	9	0	intron_retention	FALSE	canonical	3	8	junction_13	162.832078271714	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCCTTCTGCGTCTT	9455	False	NA	23	True	ATTAAA	-40	NA	113062029	113100825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113091841_113093739_113093815_113094153_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097115_113100053_113100137
ES.8572.7	chr12	+	5291	17	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-71	0	intron_retention	FALSE	canonical	3	30	junction_11	147.834736699465	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9252	False	NA	24	True	ATTAAA	-41	NA	113061826	113100826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.70	chr12	+	5084	17	NNC	ENSMUSG00000021144.15	novel	717	3	NA	NA	-15904	-10	intron_retention	FALSE	canonical	0	0	junction_1	185.680578800665	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	4227	False	NA	-19	True	NA	NA	NA	113079047	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113079260_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.71	chr12	+	2671	18	NNC	ENSMUSG00000021144.15	novel	717	3	NA	NA	-15903	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	148.463922661972	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	4228	False	NA	-19	True	NA	NA	NA	113079048	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113079260_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.72	chr12	+	2722	19	NNC	ENSMUSG00000021144.15	novel	717	3	NA	NA	-15903	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.054946100252	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	4228	False	NA	-19	True	NA	NA	NA	113079048	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113079260_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.73	chr12	+	7789	15	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-13927	-4	intron_retention	FALSE	canonical	3	192	junction_1	100.928975835809	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCAAGCCCTTCTGCG	6204	False	NA	19	True	ATTAAA	-36	NA	113081024	113100821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113083882_113084446_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8572.74	chr12	+	3898	17	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	20452	42	-12602	-10	3prime_fragment	FALSE	canonical	3	192	junction_1	94.9986019633973	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	7529	False	NA	-19	True	NA	NA	NA	113082349	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.75	chr12	+	3103	11	NIC	ENSMUSG00000021144.15	novel	2119	21	NA	NA	-4548	5	intron_retention	FALSE	canonical	3	30	junction_4	151.678904268194	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCTGCGTCTTTTGTTC	NA	False	NA	29	True	CATAAA	-19	NA	113090403	113100831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.76	chr12	+	7289	7	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-4465	4	intron_retention	FALSE	canonical	3	436	junction_1	48.7798341758377	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTGCGTCTTTTGTT	NA	False	NA	28	True	ATTAAA	-45	NA	113090486	113100830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095383_113095507_113100053_113100137
ES.8572.77	chr12	+	1995	12	ISM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	29336	2	-3718	-2	3prime_fragment	FALSE	canonical	3	436	junction_2	52.8329661674374	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAAGCCCTTCTGCGTC	NA	False	NA	21	True	ATTAAA	-38	NA	113091233	113100823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ES.8572.78	chr12	+	1790	11	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-3243	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	164.820174735983	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	NA	False	NA	-19	True	NA	NA	NA	113091708	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096951_113099416_113099449_113099900_113100053_113100137
ES.8572.8	chr12	+	2932	21	NNC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_17	177.457206108966	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAAGCCCTTCTGCGTCT	9260	False	NA	22	True	ATTAAA	-39	NA	113061834	113100824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097115_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.80	chr12	+	1439	8	NNC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	229.772203075399	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	NA	False	NA	-19	True	NA	NA	NA	113094964	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097143_113097197_113099416_113099449_113099900_113100053_113100137
ES.8572.81	chr12	+	3847	5	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	-100	-10	intron_retention	FALSE	canonical	3	501	junction_4	25.1694258973064	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAGAAAAAA	NA	False	NA	-19	True	NA	NA	NA	113095067	113100783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113095383_113095507_113095598_113096804_113099449_113099900_113100053_113100137
ES.8573.1	chr12	-	4713	1	Intergenic	novelGene_7079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCACGTAGAAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	113069845	113065132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_113065100_113069800
ES.8574.1	chr12	+	1195	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	242	2	-94	-2	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCAGTGTCGTGTGTG	5864	False	NA	28	True	AATAAA	-21	NA	113104097	113109124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ES.8574.2	chr12	+	4998	1	NIC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	-63	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5895	False	NA	30	True	AATAAA	-23	NA	113104128	113109126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113104100_113109100
ES.8574.4	chr12	+	1250	6	ISM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	282	2	-54	-2	intron_retention	FALSE	canonical	3	743	junction_5	5.67802782663136	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCCAGTGTCGTGTGTG	5904	False	NA	28	True	AATAAA	-21	NA	113104137	113109124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429
ES.8574.5	chr12	+	1663	4	ISM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	284	4	-52	-4	intron_retention	FALSE	canonical	3	748	junction_3	5.24933858267454	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGACCCAGTGTCGTGTG	5906	False	NA	26	True	AATAAA	-19	NA	113104139	113109122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848
ES.8575.1	chr12	+	705	4	NIC	ENSMUSG00000006360.12	novel	445	5	NA	NA	-181	0	intron_retention	FALSE	canonical	3	402	junction_3	14.522013940528	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	113115450	113117497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113115774_113116900_113117133_113117237_113117285_113117394
ES.8575.2	chr12	+	425	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	20	0	20	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	113115651	113117497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ES.8575.3	chr12	+	374	5	NNC	ENSMUSG00000006360.12	novel	445	5	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	180.28363070451	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGTCCTGTGTTTTTGT	NA	False	NA	10	True	AATAAA	-10	NA	113115651	113117494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113115726_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ES.8576.1	chr12	+	749	5	NNC	ENSMUSG00000037466.14	novel	584	6	NA	NA	-30	1205	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	98.7572782127981	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGGTGGCGCATGCCT	NA	False	NA	NA	False	NA	NA	NA	113120010	113122414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113120192_113120294_113120374_113121197_113121348_113121688_113121788_113122174
ES.8576.10	chr12	+	2625	7	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	190	junction_5	19.1978007999759	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCTCGCTGTCTCTGAA	NA	False	NA	NA	False	TATAAA	-10	NA	113120069	113128163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113120192_113120294_113120374_113120780_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.11	chr12	+	1958	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	30	453	-5	-453	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTCTGTCTCTTG	NA	False	NA	NA	False	NA	NA	NA	113120070	113127711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.12	chr12	+	2847	5	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	168	1	intron_retention	FALSE	canonical	3	190	junction_3	7.36545993132812	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCGCTGTCTCTGAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	113120293	113128165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113120374_113120780_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.2	chr12	+	3413	5	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	190	junction_3	17.3114846272641	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGCTCGCTGTCTCTGAA	NA	False	NA	NA	False	TATAAA	-10	NA	113120029	113128163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113120192_113120294_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.3	chr12	+	1550	4	NNC	ENSMUSG00000037466.14	novel	584	6	NA	NA	-10	1202	intron_retention	FALSE	canonical	3	62	junction_3	84.4169545898347	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAGTGGTGGCGCATG	NA	False	NA	NA	False	NA	NA	NA	113120030	113122411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113120192_113120294_113121348_113121688_113121788_113122174
ES.8576.4	chr12	+	2490	8	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	71.3030325370499	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCGCTGTCTCTGAAAA	NA	False	NA	NA	False	TATAAA	-12	NA	113120040	113128165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113120192_113120294_113120374_113120780_113120984_113121149_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.5	chr12	+	3143	6	NIC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	1	79	intron_retention	FALSE	canonical	3	190	junction_4	20.4117613154769	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGCTCTCGCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	113120041	113128246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_113120192_113120294_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.6	chr12	+	1593	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	2	846	2	-846	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCTCTGGTTGTTTCCC	NA	False	NA	NA	False	NA	NA	NA	113120042	113127318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.7	chr12	+	2208	6	NNC	ENSMUSG00000037466.14	novel	4000	9	NA	NA	2	-857	intron_retention	FALSE	canonical	3	8	junction_1	83.5789447169561	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGTGGAACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	113120051	113127307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113120206_113120294_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8576.8	chr12	+	2270	2	NNC	ENSMUSG00000037466.14	novel	624	3	NA	NA	-4	1205	intron_retention	FALSE	canonical	3	8	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGGTGGCGCATGCCT	NA	False	NA	NA	False	NA	NA	NA	113120055	113122414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_113120206_113120294
ES.8576.9	chr12	+	1306	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	20	1115	1	-1115	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGGTCCAGGCTTGTGT	NA	False	NA	NA	False	NA	NA	NA	113120060	113127049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ES.8577.1	chr12	-	134	1	Intergenic	novelGene_7080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8818	False	NA	NA	False	NA	NA	NA	113131316	113131182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_113131200_113131300
ES.8578.1	chr12	+	143	1	Intergenic	novelGene_7081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATTAAATATAT	5206	False	NA	NA	False	NA	NA	NA	113138724	113138867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_113138700_113138900
ES.8579.1	chr12	+	1623	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	-52	3	-52	-3	multi-exon	FALSE	canonical	3	28	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTGGCTATTATTCCT	800	False	NA	16	True	TTTAAA	-26	NA	113149497	113153140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_113149579_113151598
ES.8579.2	chr12	+	3613	1	Genic_Genomic	ENSMUSG00000049036.8	novel	NA	NA	NA	NA	-26	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAAGCCTGGCTATTAT	826	False	NA	12	True	TTTAAA	-22	NA	113149523	113153136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_+_113149500_113153100
ES.858.1	chr1	-	178	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAAAGGACAGT	9559	False	NA	NA	False	NA	NA	NA	82801049	82800871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_82800900_82801000
ES.8580.1	chr12	-	278	1	FSM	ENSMUSG00000104218.2	ENSMUST00000193186.2	551	1	476	-203	476	203	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGGAAACTAATCCCT	NA	False	NA	NA	False	NA	NA	NA	113344705	113344427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_113344400_113344700
ES.8581.1	chr12	-	194	1	Intergenic	novelGene_7082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTTCTATCATGATTAA	NA	False	NA	NA	False	NA	NA	NA	113903654	113903460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_113903500_113903700
ES.8582.1	chr12	-	151	1	Intergenic	novelGene_7083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	113911536	113911385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_113911400_113911500
ES.8583.1	chr12	+	178	1	Intergenic	novelGene_7084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGATAGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	114036349	114036527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_114036300_114036500
ES.8584.1	chr12	+	93	2	Antisense	novelGene_ENSMUSG00000106041.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACCCAAAATGAGATCT	NA	False	NA	NA	False	NA	NA	NA	115890371	115936908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_+_115890395_115936838
ES.8584.2	chr12	+	182	1	Intergenic	novelGene_7085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	115936817	115936999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_115936800_115937000
ES.8585.1	chr12	+	2156	4	NNC	ENSMUSG00000042063.12	novel	1958	3	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.9771087709958	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116011323	116024210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116011487_116011663_116011844_116018341_116018469_116022524
ES.8585.10	chr12	+	6253	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	66	-4361	14	1593	multi-exon	FALSE	canonical	3	41	junction_2	2	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATATTGCATTGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	116011409	116028573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018469_116022524
ES.8585.11	chr12	+	2025	4	NNC	ENSMUSG00000042063.12	novel	1958	3	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.9771087709958	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116011439	116024210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116011487_116011678_116011844_116018341_116018469_116022524
ES.8585.12	chr12	+	4804	1	NIC	ENSMUSG00000042063.12	novel	1958	3	NA	NA	7958	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116019406	116024210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116019400_116024200
ES.8585.2	chr12	+	1956	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	0	2	0	-2	multi-exon	FALSE	canonical	3	41	junction_2	2	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAACTTGTGTAATGTC	NA	False	NA	15	True	NA	NA	NA	116011343	116024210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018469_116022524
ES.8585.3	chr12	+	4729	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	0	-2771	0	3	multi-exon	FALSE	canonical	3	41	junction_2	2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTGATGTTATTGGGG	NA	False	NA	NA	False	AATAAA	-17	NA	116011343	116026983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018469_116022524
ES.8585.4	chr12	+	7248	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	2	-5292	2	2524	multi-exon	FALSE	canonical	3	41	junction_2	2	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTATTAATGTGTTTA	NA	False	NA	4	True	NA	NA	NA	116011345	116029504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018469_116022524
ES.8585.5	chr12	+	10356	2	FSM	ENSMUSG00000042063.12	ENSMUST00000182566.2	498	2	-19	-9839	-19	1595	multi-exon	FALSE	canonical	3	45	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCATTGGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	116011364	116028575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341
ES.8585.6	chr12	+	3121	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	35	-1198	-5	1198	multi-exon	FALSE	canonical	3	41	junction_2	2	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGAGGTCTTGGTGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	116011378	116025410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018469_116022524
ES.8585.7	chr12	+	4657	3	NNC	ENSMUSG00000042063.12	novel	4779	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	21	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGTGATGTTATTGG	NA	False	NA	NA	False	AATAAA	-15	NA	116011382	116026981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116011487_116018341_116018438_116022524
ES.8585.8	chr12	+	4791	3	FSM	ENSMUSG00000042063.12	ENSMUST00000183125.2	4779	3	-11	-1	1	1	multi-exon	FALSE	canonical	0	0	junction_2	22.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGTGATGTTATTGG	NA	False	NA	NA	False	AATAAA	-15	NA	116011384	116026981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116011487_116018341_116018574_116022524
ES.8585.9	chr12	+	4565	4	NNC	ENSMUSG00000042063.12	novel	4779	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.3360653902262	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTGGTGATGTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	116011386	116026980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116011487_116018341_116018469_116022524_116023344_116023461
ES.8586.1	chr12	+	178	1	Intergenic	novelGene_7086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAATGCATG	NA	False	NA	NA	False	NA	NA	NA	116036218	116036396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_116036200_116036400
ES.8587.1	chr12	-	4365	22	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	17	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	7.30607177676597	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCTTTGCTTCTTTTTT	NA	False	NA	NA	False	TATAAA	-19	NA	116226625	116169880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219579_116219872_116221040_116221095_116226470
ES.8587.10	chr12	-	5097	19	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-9	4	intron_retention	FALSE	canonical	0	0	junction_16	8.71779788708135	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACATTTTAGTGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	116226615	116171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116180100_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219579_116219872_116221040_116221095_116226470
ES.8587.11	chr12	-	3214	21	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.20533363124255	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACATTTTAGTGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	116226622	116171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188502_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.12	chr12	-	3263	23	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	9.12414379544733	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGAACATTTTAGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	116226604	116171063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219579_116219872_116221040_116221095_116226206_116226309_116226470
ES.8587.13	chr12	-	5433	19	NIC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-17	1	intron_retention	FALSE	canonical	3	13	junction_10	6.11515018036312	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTGAACATTTTAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	116226623	116171064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.14	chr12	-	2979	21	NIC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	3	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	7.58221603490694	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTGAACATTTTAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	116226603	116171064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.15	chr12	-	1507	9	NIC	ENSMUSG00000042050.9	novel	3256	8	NA	NA	-8	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	7.20134536041704	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTCTTAGATTAATGTA	NA	False	NA	NA	False	AATAAA	-15	NA	116226614	116201590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116201680_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.16	chr12	-	3219	4	NNC	ENSMUSG00000042050.9	novel	3256	8	NA	NA	-6403	739	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.2245562832516	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAATAAGGACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	116211804	116202713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116205402_116209624_116209842_116210319_116210398_116211568
ES.8587.2	chr12	-	5262	21	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-17	4	intron_retention	FALSE	canonical	0	0	junction_17	7.60920495189872	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGGGCTTACTAATTG	NA	False	NA	NA	False	AGTAAA	-21	NA	116226623	116170666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211918_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.3	chr12	-	5160	20	NIC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-9	4	intron_retention	FALSE	canonical	2	2	junction_3	7.21839754778682	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGGGCTTACTAATTG	NA	False	NA	NA	False	AGTAAA	-21	NA	116226615	116170666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116171404_116175344_116175569_116176993_116177126_116180100_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.4	chr12	-	3687	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	36	-2	0	2	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGGGGCTTACTAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	116226606	116170668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.5	chr12	-	5720	20	NIC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	-11	1	intron_retention	FALSE	canonical	3	13	junction_11	6.02625833114414	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATAGGGGCTTACTAA	NA	False	NA	NA	False	AGTAAA	-18	NA	116226617	116170669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.6	chr12	-	3480	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	37	204	1	191	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTACATATATCTGAAG	NA	False	NA	NA	False	CATAAA	-2	NA	116226605	116170874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.7	chr12	-	3287	22	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	7.42887667260536	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACATTTTAGTGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	116226605	116171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211918_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8587.8	chr12	-	3165	22	NNC	ENSMUSG00000042050.9	novel	3721	22	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	7.30607177676597	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACATTTTAGTGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	116226606	116171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219579_116219872_116221040_116221095_116226470
ES.8587.9	chr12	-	3314	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	16	391	16	4	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAACATTTTAGTGTAT	NA	False	NA	NA	False	AATAAA	-20	NA	116226626	116171061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ES.8588.1	chr12	+	5925	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-358	-7	-358	7	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTTGTTTGTCTCT	NA	False	NA	12	True	AATAAA	-25	NA	116244457	116336718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.10	chr12	+	3848	21	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	10	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	61.9834453705181	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATCATGGCAATCGTTT	NA	False	NA	NA	False	TATAAA	-20	NA	116244825	116335846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790_116334162_116334836
ES.8588.11	chr12	+	5580	22	NIC	ENSMUSG00000021171.9	novel	3847	25	NA	NA	-11	4	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	46.1855176523586	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGTTTTTTGTTTGTC	NA	False	NA	9	True	AATAAA	-22	NA	116244830	116336715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305664_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.12	chr12	+	5607	23	NIC	ENSMUSG00000021171.9	novel	3847	25	NA	NA	-11	-1	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	59.4645008345663	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116244830	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116317446_116317510_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.13	chr12	+	3222	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	15	2323	-11	-1453	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAATTTCAAATTACT	NA	False	NA	NA	False	ATTAAA	-32	NA	116244830	116334388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.15	chr12	+	5463	21	NIC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	47.3644381366442	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244837	116336711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.16	chr12	+	5553	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	46.5112085094206	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244842	116336711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333611_116333682_116333790
ES.8588.18	chr12	+	5559	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	45.5240585767246	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116244843	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333762
ES.8588.19	chr12	+	5444	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	2	-4	intron_retention	FALSE	non_canonical	0	0	junction_21	45.7171626078883	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTCGTAATATGTTTTT	NA	False	NA	1	True	AATAAA	-14	NA	116244843	116336707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333686_116333878
ES.8588.2	chr12	+	6188	23	NNC	ENSMUSG00000021171.9	novel	4287	23	NA	NA	-351	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.9253668055262	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	116244464	116336709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116284954_116285234_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.20	chr12	+	5534	23	NNC	ENSMUSG00000021171.9	novel	4287	23	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	59.5543539498177	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGTTTTTTGTTTGTC	NA	False	NA	9	True	AATAAA	-22	NA	116244844	116336715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282541_116282593_116282611_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.21	chr12	+	5163	21	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	61.7556475150249	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCGTAATATGTTTTTT	NA	False	NA	2	True	AATAAA	-15	NA	116244844	116336708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331431_116333925_116334387_116334431
ES.8588.22	chr12	+	6087	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	29	-556	3	556	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTGAGCTATACCCCAA	NA	False	NA	NA	False	ATTAAA	-22	NA	116244844	116337267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.23	chr12	+	5942	22	NIC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	12	-3	combination_of_known_junctions	FALSE	canonical	1	6	junction_3	45.1026543909178	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCGTAATATGTTTTTT	NA	False	NA	2	True	AATAAA	-15	NA	116244853	116336708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282982_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.24	chr12	+	5358	20	NIC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	-8	7	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	47.7278178669207	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTTGTTTGTCTCT	NA	False	NA	12	True	AATAAA	-25	NA	116244862	116336718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.25	chr12	+	5548	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	46.5049676716433	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	116244872	116336709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310076_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.26	chr12	+	5341	23	NNC	ENSMUSG00000021171.9	novel	4287	23	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	45.4566590417693	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	116244872	116336709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790_116333825_116333984
ES.8588.28	chr12	+	5351	21	NIC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	47.2168137425642	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244874	116336711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.29	chr12	+	3018	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	59	2483	4	-1613	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTTCTTCTAAGAC	NA	False	NA	NA	False	GATAAA	-22	NA	116244874	116334228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.3	chr12	+	5569	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	-66	5	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_18	40.103324600224	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTTGTTTGTCT	NA	False	NA	10	True	AATAAA	-23	NA	116244749	116336716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331389_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.30	chr12	+	2634	16	ISM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	59	8732	4	-7862	5prime_fragment	FALSE	canonical	3	167	junction_13	19.774281838343	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATTCACATTGAGCCAG	NA	False	NA	NA	False	NA	NA	NA	116244874	116327979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014
ES.8588.31	chr12	+	5402	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	56.5098269703393	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116244875	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307119_116310136_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331389_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.32	chr12	+	6502	21	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	5	4	intron_retention	FALSE	non_canonical	0	0	junction_3	46.9630439814116	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATGTTTTTTGTTTGTC	NA	False	NA	9	True	AATAAA	-22	NA	116244875	116336715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282556_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.33	chr12	+	5050	20	ISM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	37606	-7	-190	7	3prime_fragment	FALSE	canonical	3	167	junction_11	20.8778269106173	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTTGTTTGTCTCT	1129	False	NA	12	True	AATAAA	-25	NA	116282421	116336718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.34	chr12	+	4907	19	ISM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	39928	2	-36	-2	3prime_fragment	FALSE	canonical	3	167	junction_10	21.1444911542662	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	3451	False	NA	3	True	AATAAA	-16	NA	116284743	116336709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.35	chr12	+	2966	7	ISM	ENSMUSG00000021171.9	ENSMUST00000223150.2	4187	9	6474	868	6474	2	3prime_fragment	FALSE	canonical	3	182	junction_5	16.1838396762532	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCATGGCAATCG	NA	False	NA	NA	False	TATAAA	-17	NA	116327012	116335843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.36	chr12	+	3860	6	ISM	ENSMUSG00000021171.9	ENSMUST00000223150.2	4187	9	6556	1	6556	-1	intron_retention	FALSE	canonical	3	182	junction_5	15.5177317930167	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116327094	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631
ES.8588.37	chr12	+	5260	7	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	6649	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.6738141842517	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGTAATATGTTTTTTG	NA	False	NA	3	True	AATAAA	-16	NA	116327187	116336709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116328768_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.38	chr12	+	3688	6	ISM	ENSMUSG00000021171.9	ENSMUST00000223150.2	4187	9	8635	-5	8635	5	3prime_fragment	FALSE	canonical	3	182	junction_4	17.5909067418368	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTTGTTTGTCT	NA	False	NA	10	True	AATAAA	-23	NA	116329173	116336716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.39	chr12	+	4715	5	NIC	ENSMUSG00000021171.9	novel	4187	9	NA	NA	8772	-1	intron_retention	FALSE	canonical	3	197	junction_3	12.3364297914753	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116329310	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116329549_116330549_116330649_116331327_116331460_116332355_116333682_116333790
ES.8588.40	chr12	+	3361	7	NNC	ENSMUSG00000021171.9	novel	4187	9	NA	NA	8900	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.6738141842517	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTTGTTTGTCT	NA	False	NA	10	True	AATAAA	-23	NA	116329438	116336716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790_116335135_116335196
ES.8588.41	chr12	+	3078	3	ISM	ENSMUSG00000021171.9	ENSMUST00000223150.2	4187	9	11815	1	11815	-1	3prime_fragment	FALSE	canonical	3	182	junction_1	22	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTAATATGTTTTTTGT	NA	False	NA	4	True	AATAAA	-17	NA	116332353	116336710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116332462_116333631_116333682_116333790
ES.8588.5	chr12	+	3145	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	-24	-1546	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	46.5163760694058	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCATAGATCTGTTGT	NA	False	NA	NA	False	NA	NA	NA	116244791	116334295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303189_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.6	chr12	+	4712	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-17	865	-17	5	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATCATGGCAATCGTTT	NA	False	NA	NA	False	TATAAA	-20	NA	116244798	116335846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.7	chr12	+	4271	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	-9	1298	-9	-428	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACCAAAGTGCCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	116244806	116335413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8588.8	chr12	+	4579	23	NIC	ENSMUSG00000021171.9	novel	4287	23	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	45.4566590417693	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244807	116336711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790_116333848_116334836
ES.8588.9	chr12	+	3407	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	0	2153	0	-1283	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTGTTTATTTGTGT	NA	False	NA	NA	False	AAGAAA	-3	NA	116244815	116334558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ES.8589.1	chr12	-	3281	1	FSM	ENSMUSG00000113527.2	ENSMUST00000222938.2	550	1	-839	-1892	-839	1892	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTCTCCTGCTGCAAT	NA	False	NA	NA	False	NA	NA	NA	116244690	116241409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116241400_116244700
ES.8589.2	chr12	-	1265	1	FSM	ENSMUSG00000113527.2	ENSMUST00000222938.2	550	1	-705	-10	-705	10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTTCCCGTGAGTAT	NA	False	NA	NA	False	NA	NA	NA	116244556	116243291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116243300_116244600
ES.859.1	chr1	+	4018	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-235	-1431	-7	725	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGACTATTTTTTCA	NA	False	NA	10	True	ATTAAA	-16	NA	82817159	82874827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.11	chr1	+	3171	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-36	7	-22	-7	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817181	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.12	chr1	+	2551	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-22	5515	-22	-8	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817181	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.13	chr1	+	4007	12	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2896	13	NA	NA	15	-7	intron_retention	FALSE	canonical	3	369	junction_11	57.6353598994905	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817181	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.14	chr1	+	7797	12	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	15	-181	multi-exon	FALSE	canonical	2	2	junction_1	144.476770416848	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817181	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.15	chr1	+	4001	12	NIC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-22	-7	intron_retention	FALSE	canonical	3	119	junction_10	117.927418495691	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817181	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.16	chr1	+	5645	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-213	-3080	15	2374	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATTGTATTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	82817181	82876476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.17	chr1	+	3259	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-22	4807	-22	-6	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATACCCCTAAGTTATGA	NA	False	NA	8	True	ATTAAA	-14	NA	82817181	82874096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.19	chr1	+	3806	7	ISM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-213	10718	15	4835	intron_retention	FALSE	canonical	3	496	junction_3	23.5283516918065	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATGTGTGTATCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	82817181	82862678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948
ES.859.2	chr1	+	3293	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-235	-706	-7	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817159	82874102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.20	chr1	+	5636	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-22	2374	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	147.369056755103	492	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATTGTATTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	82817181	82876476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.21	chr1	+	7880	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-22	-183	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	147.369056755103	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGGCCTCTTCAAT	NA	False	NA	7	True	AATAAA	-20	NA	82817181	82878720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.22	chr1	+	3167	14	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	1805	14	NA	NA	15	-4	multi-exon	FALSE	non_canonical	0	0	junction_1	181.113714320017	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCCCTAAGTTATGAAT	NA	False	NA	10	True	ATTAAA	-16	NA	82817181	82874098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817444_82817534_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.23	chr1	+	3434	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	15	-5	multi-exon	FALSE	canonical	0	0	junction_10	169.70996500566	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACCCCTAAGTTATGAA	NA	False	NA	9	True	ATTAAA	-15	NA	82817181	82874097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82870973_82871304_82872196_82872289_82872719
ES.859.24	chr1	+	2891	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-209	-330	-18	-274	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTACTTTAACTATTTTC	NA	False	NA	NA	False	TTTAAA	-26	NA	82817185	82873726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.25	chr1	+	2052	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-208	508	-17	45	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTAAAATGCCTGCACT	NA	False	NA	64	True	TTTAAA	-11	NA	82817186	82872888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.26	chr1	+	3200	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-205	-99	-17	-3	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCCTAAGTTATGAATT	NA	False	NA	11	True	ATTAAA	-17	NA	82817186	82874099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.27	chr1	+	7790	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-17	-183	multi-exon	FALSE	canonical	1	14	junction_7	139.795684244305	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGGCCTCTTCAAT	NA	False	NA	7	True	AATAAA	-20	NA	82817186	82878720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860065_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.3	chr1	+	5593	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-222	-2475	3	2373	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATTGTATTGAATTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	82817169	82876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.31	chr1	+	3798	12	NNC	ENSMUSG00000026159.14	novel	3142	12	NA	NA	-14	722	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_7	183.051453724749	476	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTAAAGACTATTTTT	NA	False	NA	7	True	ATTAAA	-13	NA	82817189	82874824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860065_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.32	chr1	+	3976	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	-10	4078	-10	723	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAAGACTATTTTTT	NA	False	NA	8	True	ATTAAA	-14	NA	82817193	82874825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.35	chr1	+	7809	13	NIC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-9	-181	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	157.405593399133	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817194	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.36	chr1	+	2387	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-199	164	-8	-10	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGAAGGTTTTATTCA	NA	False	NA	19	True	ATTAAA	-31	NA	82817195	82873232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.37	chr1	+	8064	12	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-8	-181	intron_retention	FALSE	canonical	3	369	junction_11	59.2441369976392	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817195	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.38	chr1	+	5266	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-22	-2102	-8	2102	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTTTTGTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	82817195	82876204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.39	chr1	+	7784	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-22	-4620	-8	-181	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817195	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.4	chr1	+	3945	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-222	-827	3	725	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGACTATTTTTTCA	NA	False	NA	10	True	ATTAAA	-16	NA	82817169	82874827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.41	chr1	+	2633	11	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-5	-8	intron_retention	FALSE	canonical	2	2	junction_1	150.422870601515	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817198	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.42	chr1	+	2648	14	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-5	-8	multi-exon	FALSE	canonical	0	0	junction_1	178.594744716178	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817198	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82819756_82819865_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.43	chr1	+	6097	11	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2991	13	NA	NA	-5	0	intron_retention	FALSE	canonical	3	369	junction_10	53.7702519986656	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817198	82874102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.45	chr1	+	2320	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2896	13	NA	NA	-5	-12	multi-exon	FALSE	non_canonical	0	0	junction_9	177.167274222853	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGGAAGGTTTTATT	NA	False	NA	17	True	ATTAAA	-29	NA	82817198	82873230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864094_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.46	chr1	+	2450	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-19	711	-5	-5	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTATTGTTTTTGTGT	NA	False	NA	10	True	AATAAA	-10	NA	82817198	82873391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.47	chr1	+	8132	10	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-5	-8	intron_retention	FALSE	canonical	3	369	junction_9	55.3750400607385	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817198	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.5	chr1	+	3179	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-224	-603	4	-1	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTAGTAATGCCTCGT	NA	False	NA	-89	True	AATGAA	-14	NA	82817170	82873999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.50	chr1	+	3151	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_7	185.749140120636	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817198	82874102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860065_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.52	chr1	+	3237	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-2	-7	multi-exon	FALSE	canonical	0	0	junction_6	138.468683784056	467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817201	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859955_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.54	chr1	+	9033	11	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	369	junction_10	49.0979632978803	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTAAGTTATGAATTTT	NA	False	NA	13	True	ATTAAA	-19	NA	82817201	82874101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.55	chr1	+	2471	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-187	612	1	-8	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817204	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.56	chr1	+	3429	12	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	1	-7	intron_retention	FALSE	non_canonical	0	0	junction_10	148.886944740127	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817204	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82864189_82871144_82871304_82872195_82872289_82872719
ES.859.58	chr1	+	1928	13	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2896	13	NA	NA	1	1	multi-exon	FALSE	non_canonical	0	0	junction_9	177.167274222853	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGTCTTGTTTCACTG	NA	False	NA	20	True	NA	NA	NA	82817204	82872844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864094_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.6	chr1	+	3171	12	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2352	13	NA	NA	14	-7	multi-exon	FALSE	canonical	2	2	junction_1	144.476770416848	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817180	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.60	chr1	+	3598	12	Fusion	ENSMUSG00000026159.14_ENSMUSG00002074851.1	novel	2896	13	NA	NA	-5	-280	intron_retention	FALSE	canonical	3	110	junction_7	120.98569002193	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGGCCTACTTTAACT	NA	False	NA	NA	False	TTTAAA	-20	NA	82817212	82873720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.61	chr1	+	3070	12	NIC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	194.90998134125	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	NA	False	NA	7	True	ATTAAA	-13	NA	82817212	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82817611_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.63	chr1	+	7788	13	FSM	ENSMUSG00000026159.14	ENSMUST00000063380.11	2896	13	-172	-4720	2	-183	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGGCCTCTTCAAT	NA	False	NA	7	True	AATAAA	-20	NA	82817219	82878720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.64	chr1	+	2503	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	165.054599552189	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817227	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836175_82848411_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.65	chr1	+	2222	12	NNC	ENSMUSG00000026159.14	novel	2896	13	NA	NA	-63	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	174.156337099935	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817326	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82859955_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.7	chr1	+	7894	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-214	-5328	14	-179	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGCCTCTTCAATTGTG	NA	False	NA	11	True	AATAAA	-24	NA	82817180	82878724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.70	chr1	+	3014	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	40	-2	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCTAAGTTATGAATTT	NA	False	NA	12	True	ATTAAA	-18	NA	82817833	82874100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.71	chr1	+	2298	13	NNC	ENSMUSG00000026159.14	novel	856	6	NA	NA	41	-8	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	161.655497895989	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCTATTGTTTTTG	NA	False	NA	7	True	AATAAA	-7	NA	82817834	82873388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.72	chr1	+	2859	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	94	-1	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTAGTAATGCCTCGT	NA	False	NA	-89	True	AATGAA	-14	NA	82817887	82873999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.73	chr1	+	7575	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	95	-181	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	160.451165121631	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82817888	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.74	chr1	+	7581	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	96	-180	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGCCTCTTCAATTGT	NA	False	NA	10	True	AATAAA	-23	NA	82817889	82878723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.75	chr1	+	7483	13	NNC	ENSMUSG00000026159.14	novel	856	6	NA	NA	98	-182	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_7	177.854555903287	497	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGATGGCCTCTTCAATT	NA	False	NA	8	True	AATAAA	-21	NA	82817891	82878721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860065_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.77	chr1	+	5307	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	116	2373	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	160.451165121631	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATTGTATTGAATTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	82817909	82876475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.78	chr1	+	1675	13	NNC	ENSMUSG00000026159.14	novel	856	6	NA	NA	118	-1	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	161.655497895989	451	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTCTTGTTTCAC	NA	False	NA	18	True	NA	NA	NA	82817911	82872842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.79	chr1	+	5304	13	NIC	ENSMUSG00000026159.14	novel	856	6	NA	NA	126	2374	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	134.385535762679	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATTGTATTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	82817919	82876476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.8	chr1	+	3904	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-37	-725	-23	725	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGACTATTTTTTCA	NA	False	NA	10	True	ATTAAA	-16	NA	82817180	82874827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ES.859.80	chr1	+	2053	13	NNC	ENSMUSG00000026159.14	novel	856	6	NA	NA	148	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	180.413009970641	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGAAGGTTTTATTCA	NA	False	NA	19	True	ATTAAA	-31	NA	82817941	82873232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82818008_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860886_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.81	chr1	+	7373	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAAAGAAAGATA	NA	False	NA	NA	False	NA	NA	NA	82837751	82845124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_82837800_82845100
ES.859.82	chr1	+	7228	10	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	30650	-181	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_7	192.902841277259	493	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	8280	False	NA	9	True	AATAAA	-22	NA	82848443	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82871144_82871304_82872202_82872289_82872719
ES.859.83	chr1	+	1728	9	NNC	ENSMUSG00000026159.14	novel	2352	13	NA	NA	35231	-25	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	176.355774997588	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAATAAATCTTAGAAA	1819	False	NA	-10	True	AATAAA	-32	NA	82853024	82873371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_82853172_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.84	chr1	+	2916	7	ISM	ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	42551	-1424	42152	718	3prime_fragment	FALSE	canonical	3	369	junction_6	33.6352989184478	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTTTAAAGACTAT	1561	False	NA	3	True	ATTAAA	-9	NA	82859945	82874820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.85	chr1	+	2489	5	NIC	ENSMUSG00000026159.14	novel	2352	13	NA	NA	42784	-7	intron_retention	FALSE	canonical	3	369	junction_4	27.8971324691266	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	2193	False	NA	7	True	ATTAAA	-13	NA	82860577	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_82861083_82863831_82864189_82871144_82871304_82872196_82872289_82872719
ES.859.86	chr1	+	4353	6	ISM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	43805	2320	43215	-2320	3prime_fragment	FALSE	canonical	3	119	junction_4	129.389334954624	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCAGGCCTGTGTGGTGGG	2624	False	NA	NA	False	AATGAA	-12	NA	82861008	82876583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ES.859.87	chr1	+	6982	3	ISM	ENSMUSG00000026159.14	ENSMUST00000063380.11	2896	13	48398	-95	47996	-7	3prime_fragment	FALSE	canonical	3	369	junction_2	17.5	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATACCCCTAAGTTATG	7405	False	NA	7	True	ATTAAA	-13	NA	82865789	82874095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82871304_82872196_82872289_82872719
ES.859.88	chr1	+	7700	2	ISM	ENSMUSG00000026159.14	ENSMUST00000190052.7	2991	13	52740	-4620	52336	-181	intron_retention	FALSE	canonical	3	404	junction_1	0	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGGCCTCTTCAATTG	NA	False	NA	9	True	AATAAA	-22	NA	82870129	82878722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82871304_82872196
ES.859.89	chr1	+	599	1	ISM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	57380	3721	56790	1080	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATTTAAGGAATGTTT	NA	False	NA	NA	False	GATAAA	-20	NA	82874583	82875182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_82874600_82875200
ES.859.9	chr1	+	2561	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-213	4	15	-4	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTATTGTTTTTGTGTT	NA	False	NA	11	True	AATAAA	-11	NA	82817181	82873392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ES.8590.1	chr12	-	6016	1	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCAGTCCAATAACACT	NA	False	NA	NA	False	NA	NA	NA	116286369	116280353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116280400_116286400
ES.8590.2	chr12	-	2864	3	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116286369	116280385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116281490_116282421_116282556_116284743
ES.8590.3	chr12	-	5929	2	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116286369	116280385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116283144_116283198
ES.8590.4	chr12	-	178	1	Intergenic	novelGene_7087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATCATCATTTCCA	NA	False	NA	NA	False	NA	NA	NA	116281159	116280981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_116281000_116281200
ES.8591.1	chr12	-	163	1	Intergenic	novelGene_7088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	116290696	116290533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_116290500_116290700
ES.8592.1	chr12	-	4185	1	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAACATTAACA	NA	False	NA	NA	False	NA	NA	NA	116322258	116318073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116318100_116322300
ES.8593.1	chr12	-	9145	1	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTCTAAACTGTCCT	NA	False	NA	NA	False	AATAAA	-13	NA	116336486	116327341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116327300_116336500
ES.8594.1	chr12	-	1280	2	Antisense	novelGene_ENSMUSG00000021171.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116349260	116347369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_116348162_116348772
ES.8595.1	chr12	+	4447	29	NNC	ENSMUSG00000042029.8	novel	678	3	NA	NA	-993	-934	intron_retention	FALSE	canonical	0	0	junction_1	56.9214460498691	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368028	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116368786_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.10	chr12	+	3625	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-51	-934	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368970	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.11	chr12	+	3830	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-50	-934	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368971	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.12	chr12	+	4250	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-50	484	-50	-484	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGCTTACTCCATTG	NA	False	NA	NA	False	NA	NA	NA	116368971	116424747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.13	chr12	+	3800	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-50	934	-50	-934	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368971	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.14	chr12	+	6686	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-50	-198	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTGCCAAGAATAATATT	NA	False	NA	17	True	AATAAA	-22	NA	116368971	116427153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.15	chr12	+	6643	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-50	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	61.316717099975	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116368971	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390362_116391270_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.16	chr12	+	6473	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-48	-199	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	60.7316388844498	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368973	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.17	chr12	+	3613	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-48	-939	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	60.7316388844498	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTGTGTCTTTTGTA	NA	False	NA	2	True	AATAGA	-19	NA	116368973	116424292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.18	chr12	+	6506	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-47	-199	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368974	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.19	chr12	+	7081	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-45	-8	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCAGTGTCTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	116368976	116427343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.2	chr12	+	3724	29	NNC	ENSMUSG00000042029.8	novel	678	3	NA	NA	-108	-940	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.2292622593545	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATGTGTGTCTTTTGT	NA	False	NA	1	True	AATAGA	-18	NA	116368913	116424291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116368977_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.21	chr12	+	3797	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-40	-934	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	69.489428061	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368981	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.22	chr12	+	3767	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-40	-934	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	60.3859504372009	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368981	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.23	chr12	+	6488	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-38	-204	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	70.0772843990955	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAACTGAGTGCCAAGAAT	NA	False	NA	11	True	AATAAA	-16	NA	116368983	116427147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.24	chr12	+	3575	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-30	-940	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	63.0128560488639	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAATGTGTGTCTTTTGT	NA	False	NA	1	True	AATAGA	-18	NA	116368991	116424291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.25	chr12	+	6369	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	69.3287447749561	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116368997	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382896_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.26	chr12	+	6315	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.5181088026779	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116368997	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.27	chr12	+	6701	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-24	-199	intron_retention	FALSE	canonical	3	46	junction_1	49.8806860441663	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368997	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.29	chr12	+	6791	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-23	-199	intron_retention	FALSE	canonical	1	3	junction_28	56.4595190903923	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368998	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183_116424260_116424336
ES.8595.3	chr12	+	6747	29	NNC	ENSMUSG00000042029.8	novel	678	3	NA	NA	-91	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9214460498691	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAACTTGGGTTAAGTC	NA	False	NA	NA	False	NA	NA	NA	116368930	116427308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116368977_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.31	chr12	+	6300	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-23	-201	combination_of_known_splicesites	FALSE	canonical	3	12	junction_11	68.0350262210533	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116368998	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.32	chr12	+	6821	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-22	-2115	-22	-5	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTTGTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	116368999	116427346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.34	chr12	+	5897	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-20	-938	intron_retention	FALSE	canonical	0	0	junction_3	73.6476900419878	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369001	116424293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116370817_116370931_116375994_116376184_116376682_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.35	chr12	+	6599	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-20	-202	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	60.3859504372009	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369001	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.36	chr12	+	4040	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-20	-488	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTTGCTTACTCC	NA	False	NA	NA	False	NA	NA	NA	116369001	116424743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.37	chr12	+	6535	30	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-20	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	72.9822515195364	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369001	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415899_116415987_116424183_116424260_116424336
ES.8595.38	chr12	+	9157	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-19	-201	intron_retention	FALSE	canonical	3	183	junction_1	32.7193779327739	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116369002	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.39	chr12	+	6662	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-18	-202	intron_retention	FALSE	canonical	3	91	junction_1	43.146389730145	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369003	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.4	chr12	+	4047	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-57	-934	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368964	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.40	chr12	+	4286	19	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-18	-207	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	82.0218466832668	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTAACTGAGTGCCAAG	NA	False	NA	8	True	AATAAA	-13	NA	116369003	116427144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402297_116425094
ES.8595.41	chr12	+	6603	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-18	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	77.2798386992866	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369003	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116385990_116386150_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.43	chr12	+	6422	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-16	-199	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	63.0128560488639	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369005	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.44	chr12	+	4015	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-16	-486	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	63.0128560488639	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTTGCTTACTCCAT	NA	False	NA	NA	False	NA	NA	NA	116369005	116424745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.46	chr12	+	3590	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	0	-934	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	72.5848068387141	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116369021	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382840_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.47	chr12	+	4050	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	2	-486	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTTGCTTACTCCAT	NA	False	NA	NA	False	NA	NA	NA	116369023	116424745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.48	chr12	+	6574	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-51	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCATGAGTTAACTTGG	NA	False	NA	NA	False	NA	NA	NA	116369024	116427300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.49	chr12	+	3986	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-533	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	55.9940473026672	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTATTGCCCTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	116369024	116424698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.5	chr12	+	3660	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-56	-934	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116368965	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.50	chr12	+	4028	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-484	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	67.4619437504979	361	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGCTTACTCCATTG	NA	False	NA	NA	False	NA	NA	NA	116369024	116424747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.52	chr12	+	3381	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	5	-938	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	78.7006255473135	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369026	116424293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116375998_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.53	chr12	+	6290	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-5	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	77.6726449950126	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369029	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379104_116382871_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.54	chr12	+	6424	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	0	-199	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	55.9940473026672	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369040	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.55	chr12	+	4200	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-2	-484	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGCTTACTCCATTG	NA	False	NA	NA	False	NA	NA	NA	116369051	116424747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.56	chr12	+	6322	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-2	-199	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_28	62.3933682209831	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369051	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183_116424260_116424336
ES.8595.57	chr12	+	6578	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-1	-202	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	69.489428061	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369052	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116369321_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.6	chr12	+	6483	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-54	-199	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368967	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.60	chr12	+	3563	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	1	-938	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	70.0772843990955	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116369054	116424293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.62	chr12	+	3759	30	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	1	-279	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	69.043903728662	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGGCCCAAAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	116369054	116424952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183_116424291_116424933
ES.8595.63	chr12	+	6442	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	1	-203	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	62.4331302082432	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACTGAGTGCCAAGAATA	NA	False	NA	12	True	AATAAA	-17	NA	116369054	116427148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.64	chr12	+	6334	27	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3	-202	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	68.5437708381298	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369056	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.66	chr12	+	6580	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	5	-41	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACTTGGGTTAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	116369058	116427310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.67	chr12	+	8689	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	15	-201	intron_retention	FALSE	canonical	1	4	junction_1	57.0418718831088	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116369068	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.68	chr12	+	6564	29	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	21	-201	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	55.6934942890321	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGTGCCAAGAATAAT	NA	False	NA	14	True	AATAAA	-19	NA	116369074	116427150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369096_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.69	chr12	+	6841	27	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	54	-202	intron_retention	FALSE	non_canonical	0	0	junction_25	57.5484874029445	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369107	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414098_116415886_116415987_116424183
ES.8595.7	chr12	+	6729	30	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-54	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	80.2331027250562	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368967	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415227_116415268_116415886_116415987_116424183
ES.8595.70	chr12	+	3881	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	54	-934	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	56.862624145315	355	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTTGTATATTG	NA	False	NA	7	True	AATAGA	-24	NA	116369107	116424297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369498_116370817_116370931_116376017_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.71	chr12	+	12052	26	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	268	-202	intron_retention	FALSE	canonical	3	183	junction_1	32.0508595828567	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369321	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116406745_116407920_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.73	chr12	+	6307	28	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	389	-202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	57.9572000448351	380	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116369442	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393387_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.74	chr12	+	6368	27	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	1794	-1918	1762	-202	3prime_fragment	FALSE	canonical	3	197	junction_5	29.5212540023256	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116370815	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.75	chr12	+	3511	27	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	1795	938	1763	-938	3prime_fragment	FALSE	canonical	3	197	junction_5	29.5212540023256	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTGTCTTTTGTAT	NA	False	NA	3	True	AATAGA	-20	NA	116370816	116424293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.76	chr12	+	5490	23	NNC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	3703	-202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	60.2075096219403	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	8921	False	NA	13	True	AATAAA	-18	NA	116382882	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183_116425938_116426066
ES.8595.77	chr12	+	2648	20	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	17792	930	7634	-930	3prime_fragment	FALSE	canonical	3	235	junction_7	21.8194555995167	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTGTATATTGCTTT	NA	False	NA	11	True	AATAGA	-28	NA	116386813	116424301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.78	chr12	+	4355	12	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	14607	-202	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	78.0069926935458	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116393786	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116415886_116415987_116424183
ES.8595.79	chr12	+	3607	13	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	29291	-1106	-17487	-1014	3prime_fragment	FALSE	canonical	3	241	junction_7	18.8699864570404	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGCCTTTGACTGACT	NA	False	NA	NA	False	ATTAAA	-23	NA	116398312	116426337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.8	chr12	+	6897	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	-52	-199	intron_retention	FALSE	canonical	3	183	junction_1	32.2243081487453	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368969	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8595.80	chr12	+	4340	1	NIC	ENSMUSG00000042029.8	novel	3355	2	NA	NA	7010	-202	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGAGTGCCAAGAATAA	NA	False	NA	13	True	AATAAA	-18	NA	116422809	116427149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_116422800_116427100
ES.8595.9	chr12	+	6657	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	-52	-1921	-52	-199	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116368969	116427152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ES.8596.1	chr12	-	5610	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	49	-2718	49	2718	multi-exon	FALSE	canonical	2	13	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAAATTTGTCTTTTTA	NA	False	NA	-53	True	NA	NA	NA	116368781	116362848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116368264_116368586
ES.8596.2	chr12	-	5944	1	Genic_Genomic	ENSMUSG00000112980.2	novel	NA	NA	NA	NA	33	2713	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGCACTAAATTTGTCT	NA	False	NA	-58	True	NA	NA	NA	116368797	116362853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr12_-_116362900_116368800
ES.8596.3	chr12	-	3024	1	NIC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	30	-210	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGCCAGCCATGAA	NA	False	NA	NA	False	NA	NA	NA	116368800	116365776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_116365800_116368800
ES.8596.4	chr12	-	2462	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	-1	-441	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAGTCTCAGTGTCTC	NA	False	NA	0	True	NA	NA	NA	116368831	116366007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116368264_116368625
ES.8596.5	chr12	-	2477	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	23	441	23	-441	multi-exon	FALSE	canonical	2	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCAGTCTCAGTGTCTC	NA	False	NA	0	True	NA	NA	NA	116368807	116366007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_116368264_116368586
ES.8596.6	chr12	-	1412	1	ISM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	1189	663	1189	-663	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAACTGTTGAGTAAATT	NA	False	NA	NA	False	NA	NA	NA	116367641	116366229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_116366200_116367600
ES.8596.7	chr12	-	1391	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	23	-1488	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAGAAAGTTGACTCT	NA	False	NA	NA	False	NA	NA	NA	116368807	116367054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116368264_116368625
ES.8596.8	chr12	-	778	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	48	-2076	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTAGTGGTCATGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	116368782	116367642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_116368264_116368625
ES.8597.1	chr12	+	2269	1	Intergenic	novelGene_7089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAGAATACCCAAGATA	NA	False	NA	NA	False	NA	NA	NA	116432379	116434648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_116432400_116434600
ES.8598.1	chr12	+	4558	24	NNC	ENSMUSG00000056553.15	novel	3201	23	NA	NA	-11	1315	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.38039198838153	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATGGTCTTTATTT	6416	False	NA	NA	False	ATTAAA	-13	NA	116449378	117241784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_116449594_116544018_116544070_116685702_116685817_116787936_116788040_116804863_116805027_116822462_116822812_116835555_116835757_116837270_116837312_116839609_116839993_116852458_116852546_116864587_116864668_116986423_116986489_117125213_117125427_117148200_117148396_117175475_117175624_117190766_117190841_117196903_117196982_117211276_117211397_117212153_117212321_117217222_117217277_117219165_117219231_117233196_117233271_117240178_117240433_117240520
ES.8598.2	chr12	+	1852	6	NNC	ENSMUSG00000056553.15	novel	3458	23	NA	NA	765623	1315	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2.22710574513201	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATGGTCTTTATTT	NA	False	NA	NA	False	ATTAAA	-13	NA	117215075	117241784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117215217_117217222_117217277_117219165_117219231_117233196_117233271_117240178_117240433_117240520
ES.8599.1	chr12	-	2362	1	Intergenic	novelGene_7090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTAGGGTTCAGGAG	NA	False	NA	NA	False	NA	NA	NA	116465657	116463295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_116463300_116465700
ES.86.1	chr1	+	2318	3	Antisense	novelGene_ENSMUSG00000067851.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCTTGATTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	10222131	10225069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_10223750_10223831_10223968_10224505
ES.860.1	chr1	-	1625	1	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGGGGGGTGGGGGGGGG	2060	False	NA	NA	False	NA	NA	NA	82830532	82828907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_82828900_82830500
ES.8600.1	chr12	-	176	1	Intergenic	novelGene_7091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATGTGTGAACAAA	8107	False	NA	NA	False	NA	NA	NA	116477500	116477324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_116477300_116477500
ES.8601.1	chr12	-	174	1	Intergenic	novelGene_7092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	116516786	116516612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_116516600_116516800
ES.8602.1	chr12	-	2252	1	Antisense	novelGene_ENSMUSG00000056553.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGTGTGCGCATGTTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	117212402	117210150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr12_-_117210200_117212400
ES.8603.1	chr12	-	177	1	Intergenic	novelGene_7093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	117386907	117386730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_117386700_117386900
ES.8604.1	chr12	-	175	1	Intergenic	novelGene_7094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGACAGTAC	NA	False	NA	NA	False	NA	NA	NA	117388007	117387832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_117387800_117388000
ES.8605.1	chr12	+	177	1	Intergenic	novelGene_7095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGTAGGCAT	NA	False	NA	NA	False	NA	NA	NA	117406226	117406403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_117406200_117406400
ES.8606.1	chr12	+	207	1	Intergenic	novelGene_7096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTAAGTGCTATCAGT	NA	False	NA	NA	False	NA	NA	NA	117486946	117487153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_117486900_117487200
ES.8607.1	chr12	+	6476	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-47	3	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTAGACTCTTCTG	NA	False	NA	NA	False	AATATA	-21	NA	117497460	117723475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.12	chr12	+	4257	27	NNC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	105	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	7.78530325328193	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGCTCCTGCCTAGACT	NA	False	NA	NA	False	AATATA	-15	NA	117497612	117723469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697_117720389_117722449
ES.8607.13	chr12	+	7922	22	NNC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-12721	-399	intron_retention	FALSE	canonical	0	0	junction_1	8.25390720368143	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTCTTGCCTTTGGAT	NA	False	NA	NA	False	ATTAAA	-29	NA	117546139	117723073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117546175_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156
ES.8607.2	chr12	+	3969	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-40	511	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGATACTAGTTCCTTC	NA	False	NA	NA	False	TTTAAA	-29	NA	117497467	117720975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.3	chr12	+	6063	26	NNC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-34	-399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	7.92101003660518	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTCTTGCCTTTGGAT	NA	False	NA	NA	False	ATTAAA	-29	NA	117497473	117723073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689683_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.4	chr12	+	6348	25	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-29	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	8.04317775094728	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGATACCGCTCCTGCC	NA	False	NA	NA	False	AATATA	-9	NA	117497478	117723463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.7	chr12	+	3569	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-19	132	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTTGGTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	117497488	117720596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.8	chr12	+	3431	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAACTGTCTTTACATAT	NA	False	NA	NA	False	NA	NA	NA	117497494	117720464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ES.8607.9	chr12	+	3357	5	ISM	ENSMUSG00000041992.10	ENSMUST00000220781.2	1078	9	-11	71608	-11	-23480	5prime_fragment	FALSE	canonical	3	20	junction_4	5.21416340365355	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATGTTGTCCAC	NA	False	NA	NA	False	AATAAA	-17	NA	117497496	117550382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662
ES.8608.1	chr12	-	178	1	Intergenic	novelGene_7097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	117666699	117666521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_117666500_117666700
ES.8609.1	chr12	+	2944	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	23	-10	23	10	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTCTGTGGCATCCTTG	NA	False	NA	24	True	AATAAA	-24	NA	117807272	117842451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.10	chr12	+	4843	9	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	-1	intron_retention	FALSE	canonical	2	12	junction_2	82.2249201884684	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807469	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117840778_117841201
ES.8609.11	chr12	+	3505	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	0	intron_retention	FALSE	canonical	3	107	junction_2	35.806554916663	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807469	117842441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
ES.8609.12	chr12	+	2246	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-148	-487	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATAGGTGTGTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	117807470	117841954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.14	chr12	+	2576	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-127	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	68.4715953881608	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807491	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.15	chr12	+	2939	12	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-107	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	91.0928143513322	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGTTGTCACCTGTC	NA	False	NA	11	True	AATAAA	-11	NA	117807511	117842438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839153_117839210_117839309_117839460_117840640_117840778_117840913_117841108_117841201
ES.8609.16	chr12	+	3623	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	262	-928	-107	928	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCAGAATACTGTGG	NA	False	NA	NA	False	NA	NA	NA	117807511	117843369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.17	chr12	+	1947	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	273	737	-96	-737	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTGTGAGTAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	117807522	117841704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.18	chr12	+	4366	8	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-82	-1018	intron_retention	FALSE	canonical	3	107	junction_2	32.9718494650036	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGTATTGTGACAAGT	NA	False	NA	NA	False	AGTAAA	-29	NA	117807536	117841423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833740_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
ES.8609.20	chr12	+	2917	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-49	-485	intron_retention	FALSE	canonical	3	109	junction_2	35.2790217409724	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGTGTAGTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	117807569	117841956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
ES.8609.22	chr12	+	3448	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-25	6	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	84.8575865789265	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCTGTCTGTGGCATC	NA	False	NA	20	True	AATAAA	-20	NA	117807593	117842447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839210_117839309_117839460_117840640_117840778_117841201
ES.8609.24	chr12	+	2851	12	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	92.1649617006878	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807616	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117839888_117839990_117840640_117840778_117841201
ES.8609.25	chr12	+	3982	8	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	7	intron_retention	FALSE	canonical	3	107	junction_2	38.2713192554297	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGTCTGTGGCATCC	NA	False	NA	21	True	AATAAA	-21	NA	117807616	117842448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117839460_117840640_117840778_117841201
ES.8609.26	chr12	+	4543	8	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-2	7	intron_retention	FALSE	canonical	3	109	junction_2	35.5562216490895	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGTCTGTGGCATCC	NA	False	NA	21	True	AATAAA	-21	NA	117807616	117842448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117840778_117841201
ES.8609.29	chr12	+	3517	10	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-1	2	intron_retention	FALSE	canonical	2	12	junction_2	77.555873924848	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTCACCTGTCTGTGG	NA	False	NA	16	True	AATAAA	-16	NA	117807617	117842443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
ES.8609.3	chr12	+	4054	13	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-152	925	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.4901774902791	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGAAAAGCAGAATACTG	NA	False	NA	NA	False	NA	NA	NA	117807466	117843366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117815671_117815750_117828357_117828508_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.31	chr12	+	4631	8	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	2	-3	intron_retention	FALSE	canonical	3	109	junction_2	36.350897583169	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGTTGTCACCTGTC	NA	False	NA	11	True	AATAAA	-11	NA	117807620	117842438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
ES.8609.33	chr12	+	3567	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	2	928	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	78.4764932957634	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGCAGAATACTGTGG	NA	False	NA	NA	False	NA	NA	NA	117807620	117843369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839153_117839210_117839309_117839460_117840640_117840778_117841201
ES.8609.34	chr12	+	3581	9	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	1	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	84.7606003695113	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807623	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837623_117837802_117838418_117839684_117840640_117840778_117841201
ES.8609.35	chr12	+	2571	10	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	66.918044587077	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807624	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841208
ES.8609.36	chr12	+	2806	12	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	24	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	85.6144538658269	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACCTGTCTGTGGCATCC	NA	False	NA	21	True	AATAAA	-21	NA	117807646	117842448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117815671_117815750_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.37	chr12	+	2589	2	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	33017	923	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTGAAAAGCAGAATAC	9757	False	NA	NA	False	NA	NA	NA	117840639	117843364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117840778_117840913
ES.8609.4	chr12	+	4683	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	-1	intron_retention	FALSE	canonical	3	107	junction_2	32.2991389204109	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807468	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_+_117807693_117828764_117828900_117833740_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.5	chr12	+	2898	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.8209074068624	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807468	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.6	chr12	+	4018	9	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	-5	intron_retention	FALSE	canonical	2	5	junction_6	68.9391715572504	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCATGTTGTCACCTG	NA	False	NA	9	True	AATAAA	-9	NA	117807468	117842436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117839210_117839309_117839460_117840640_117840778_117841201
ES.8609.7	chr12	+	1705	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	220	1032	-149	-1032	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATACCTGCATAGACCT	NA	False	NA	NA	False	AGTAAA	-15	NA	117807469	117841409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.8	chr12	+	1855	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	-1040	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.7063405534834	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTATCCATACCTGC	NA	False	NA	NA	False	AGTAAA	-7	NA	117807469	117841401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ES.8609.9	chr12	+	3610	10	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	-1	intron_retention	FALSE	canonical	2	3	junction_7	81.6720330814308	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGTCACCTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	117807469	117842440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117839577_117839684_117840640_117840778_117841201
ES.861.1	chr1	-	180	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	82927459	82927279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_82927300_82927500
ES.8610.1	chr12	+	4271	1	Intergenic	novelGene_7099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	118265652	118269923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_118265700_118269900
ES.8610.2	chr12	+	3856	1	Intergenic	novelGene_7100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGGTGGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	118269077	118272933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_118269100_118272900
ES.8611.1	chr12	-	3601	1	FSM	ENSMUSG00000113831.2	ENSMUST00000220671.2	2970	1	-633	2	-633	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTAGTGGAATTTTGAT	2	True	NA	NA	False	AATAAA	-30	NA	118198932	118195331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118195300_118198900
ES.8611.10	chr12	-	5478	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-74	-2727	-2	-294	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAATGGAAAAAA	NA	False	NA	NA	False	TATAAA	-38	NA	118265177	118198961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.11	chr12	-	5323	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-105	-2541	-33	-480	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTTGTGGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	118265208	118199147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.12	chr12	-	4519	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-60	-1782	12	-1239	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAATCAGTGCTATCAAT	NA	False	NA	NA	False	AATATA	-17	NA	118265163	118199906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.13	chr12	-	2256	4	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-16	23569	-14	269	5prime_fragment	FALSE	canonical	2	11	junction_2	4.10960933531265	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTAGATTTCTCTTG	NA	False	NA	NA	False	AATAAA	-26	NA	118265119	118225257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr12_-_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.14	chr12	-	5113	1	Intergenic	novelGene_7098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	118247834	118242721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_118242700_118247800
ES.8611.2	chr12	-	1716	1	FSM	ENSMUSG00000113831.2	ENSMUST00000220671.2	2970	1	454	800	454	-800	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTCTAGCTTGTA	1089	False	NA	NA	False	NA	NA	NA	118197845	118196129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118196100_118197800
ES.8611.3	chr12	-	5825	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-125	-3023	-53	2	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTCATCACGGTGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	118265228	118198665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.4	chr12	-	6323	5	NIC	ENSMUSG00000025323.11	novel	5694	6	NA	NA	-47	0	intron_retention	FALSE	canonical	3	17	junction_4	1.92028643696715	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCTCATCACGGTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	118265222	118198667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118264544_118264961
ES.8611.6	chr12	-	5656	5	NIC	ENSMUSG00000025323.11	novel	2677	6	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	9.24662100445346	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACCTTCTCATCACGGT	NA	False	NA	NA	False	AATAAA	-12	NA	118265174	118198670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264961
ES.8611.7	chr12	-	5794	7	NNC	ENSMUSG00000025323.11	novel	2677	6	NA	NA	-10	-55	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.08142181721685	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCTCATTTAATTATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	118265185	118198722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_118202130_118218144_118218345_118219501_118219571_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8611.8	chr12	-	5699	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-106	-2916	-34	-105	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGCAGTAACAATTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	118265209	118198772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ES.8612.1	chr12	-	3461	4	NNC	ENSMUSG00000113875.2	novel	884	4	NA	NA	295	2619	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCCTTCTGTCTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	118493633	118479412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr12_-_118482442_118484918_118485072_118492007_118492063_118493409
ES.8613.1	chr12	+	202	1	Intergenic	novelGene_7101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATACAGTGGATTGAGAGT	NA	False	NA	NA	False	NA	NA	NA	118518613	118518815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_118518600_118518800
ES.8614.1	chr12	-	181	1	Intergenic	novelGene_7102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATAAAATAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	118639807	118639626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_118639600_118639800
ES.8615.1	chr12	+	175	1	Intergenic	novelGene_7103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	118744820	118744995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_118744800_118745000
ES.8616.1	chr12	+	175	1	Intergenic	novelGene_7104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTATTCTTATT	NA	False	NA	NA	False	NA	NA	NA	118839909	118840084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_118839900_118840100
ES.8617.1	chr12	-	176	1	Intergenic	novelGene_7105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAATTAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	118880416	118880240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_-_118880200_118880400
ES.8618.1	chr12	+	3387	1	FSM	ENSMUSG00000021908.11	ENSMUST00000022467.11	1878	1	-43	-1466	-43	1466	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCAGCAAATTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	119224669	119228056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr12_+_119224700_119228100
ES.8619.1	chr12	+	175	1	Intergenic	novelGene_7106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAAGCTATGAGG	NA	False	NA	NA	False	NA	NA	NA	119257228	119257403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr12_+_119257200_119257400
ES.862.1	chr1	-	3012	7	FSM	ENSMUSG00000038496.17	ENSMUST00000045560.15	2974	7	-33	-5	-33	5	multi-exon	FALSE	canonical	1	1	junction_5	3.48409082672781	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTATTTCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	83016202	82990238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83005733_83005864_83016090
ES.862.2	chr1	-	2875	6	FSM	ENSMUSG00000038496.17	ENSMUST00000164473.2	1550	6	-49	-1276	-32	0	multi-exon	FALSE	canonical	2	2	junction_5	2.92574776766556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTGGTTATTTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	83016201	82990244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83016090
ES.862.3	chr1	-	3318	9	NNC	ENSMUSG00000038496.17	novel	2974	7	NA	NA	-55	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	3.78937659780603	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATTTTTATTGGTTA	NA	False	NA	NA	False	AATAAA	-6	NA	83016224	82990250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83004959_83005049_83005733_83005864_83010548_83010756_83016090
ES.8620.1	chr13	+	364	1	FSM	ENSMUSG00000114003.2	ENSMUST00000221154.2	781	1	539	-122	539	122	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	3349425	3349789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3349400_3349800
ES.8621.1	chr13	+	3324	3	NIC	ENSMUSG00000097709.9	novel	442	4	NA	NA	-19	23	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAACTTTTCAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	3528210	3538081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3528391_3529908_3530002_3535030
ES.8621.2	chr13	+	3100	4	FSM	ENSMUSG00000097709.9	ENSMUST00000186610.7	630	4	-83	-2387	-9	-756	multi-exon	FALSE	canonical	3	8	junction_3	9.84321537348893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGATTTTGTACCA	NA	False	NA	NA	False	ATTAAA	-38	NA	3528220	3541650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3528391_3529908_3530002_3535048_3535221_3538985
ES.8621.3	chr13	+	3054	4	FSM	ENSMUSG00000097709.9	ENSMUST00000191585.7	670	4	-17	-2367	-1	-756	multi-exon	FALSE	canonical	2	6	junction_1	5.24933858267454	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATGATTTTGTACCA	NA	False	NA	NA	False	ATTAAA	-38	NA	3528228	3541650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3528353_3529908_3530002_3535048_3535221_3538985
ES.8621.4	chr13	+	3275	3	ISM	ENSMUSG00000097709.9	ENSMUST00000186610.7	630	4	-62	1182	-1	23	5prime_fragment	FALSE	canonical	3	18	junction_2	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAACTTTTCAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	3528241	3538081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3528391_3529908_3530002_3535048
ES.8621.5	chr13	+	4191	4	NNC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	3	117	intron_retention	FALSE	non_canonical	0	0	junction_1	9.42809041582063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTCACCCCAGTGTTT	NA	False	NA	NA	False	AATACA	-12	NA	3528248	3544515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3528396_3528481_3530002_3535030_3535221_3542181
ES.8621.6	chr13	+	5669	4	FSM	ENSMUSG00000097709.9	ENSMUST00000185835.7	923	4	-28	-4718	3	1184	multi-exon	FALSE	canonical	2	3	junction_1	6.84754619472471	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAAGTACTGTCATTT	NA	False	NA	NA	False	AATACA	-16	NA	3528248	3540467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3528353_3529521_3529575_3529908_3530002_3535048
ES.8621.7	chr13	+	2575	4	FSM	ENSMUSG00000097709.9	ENSMUST00000221008.2	2568	4	-6	-1	-1	1	multi-exon	FALSE	canonical	2	6	junction_1	6.18241233033047	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGGACAAGGTTGTT	NA	False	NA	NA	False	TTTAAA	-18	NA	3528260	3544399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3528353_3529908_3530002_3535048_3535221_3542181
ES.8621.8	chr13	+	2628	4	NIC	ENSMUSG00000097709.9	novel	2568	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	13.1993265821489	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATGGACAAGGTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	3528262	3544398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3528391_3529908_3530002_3535030_3535221_3542181
ES.8621.9	chr13	+	5602	1	NIC	ENSMUSG00000097709.9	novel	4769	2	NA	NA	2522	272	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACTGCTTCATTTGGTT	NA	False	NA	NA	False	NA	NA	NA	3530847	3536449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3530800_3536400
ES.8622.1	chr13	+	179	1	Intergenic	novelGene_7107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTGGAACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	3583223	3583402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3583200_3583400
ES.8623.1	chr13	+	2445	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	-70	1928	-70	123	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGTTTGTTTCATGG	NA	False	NA	NA	False	NA	NA	NA	3587992	3615943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.10	chr13	+	7345	10	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-4	385	intron_retention	FALSE	non_canonical	0	0	junction_2	623.878549434459	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTTTTGTAGTGCAG	NA	False	NA	5	True	AATAAA	-14	NA	3588123	3616205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3603462_3604033_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.11	chr13	+	2161	11	NIC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	580.528517818031	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588123	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604441_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.12	chr13	+	2185	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	589.614119573132	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588124	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604416_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.13	chr13	+	2010	10	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	609.236944317223	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACCACTCTTGGTATT	NA	False	NA	27	True	AATAAA	-10	NA	3588124	3615812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614617_3615044
ES.8623.14	chr13	+	2201	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	587.927852716641	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588128	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614843_3614914_3614995
ES.8623.16	chr13	+	4043	9	NIC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-1	1	intron_retention	FALSE	canonical	3	1666	junction_3	146.540949908208	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	36	True	AATAAA	-19	NA	3588128	3615821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3612038_3614539_3614685_3614858
ES.8623.17	chr13	+	1437	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	68	2798	1	-144	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGGATCTGAGTTTGA	NA	False	NA	NA	False	ATTAAA	-16	NA	3588130	3615073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.18	chr13	+	2575	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	0	383	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	591.886847294312	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGACTTTTGTAGTGC	NA	False	NA	3	True	AATAAA	-12	NA	3588133	3616203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606302_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.2	chr13	+	2754	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	-55	1604	-55	447	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTATCTATGTAGTG	NA	False	NA	67	True	ATTAAA	-36	NA	3588007	3616267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.20	chr13	+	4234	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	71	-2	0	2	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTTTTTTCTTAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	3588133	3617873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.21	chr13	+	2183	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	71	2049	0	2	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTATTGAGTGTCTGT	NA	False	NA	37	True	AATAAA	-20	NA	3588133	3615822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.22	chr13	+	2359	12	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	740.452809864588	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	36	True	AATAAA	-19	NA	3588133	3615821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3595800_3595978_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.23	chr13	+	2189	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	581.798667925598	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTCTTGGTATTGAG	NA	False	NA	30	True	AATAAA	-13	NA	3588138	3615815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614977
ES.8623.24	chr13	+	2162	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	587.927852716641	906	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTCTTGGTATTGAG	NA	False	NA	30	True	AATAAA	-13	NA	3588138	3615815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614676_3614858_3614914_3614995
ES.8623.26	chr13	+	2066	10	FSM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	13	-2	-5	2	multi-exon	FALSE	canonical	0	0	junction_1	614.94494383694	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTATTGAGTGTCTGT	NA	False	NA	37	True	AATAAA	-20	NA	3588142	3615822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.27	chr13	+	2052	10	NIC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	17	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	623.878549434459	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTATTGAGTGTCTGT	NA	False	NA	37	True	AATAAA	-20	NA	3588164	3615822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3588344_3598862_3598971_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.28	chr13	+	2294	11	NNC	ENSMUSG00000021218.11	novel	600	3	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	583.253838392856	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588481	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588805_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.29	chr13	+	10342	7	NIC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	6002	1	intron_retention	FALSE	canonical	3	1666	junction_2	161.047353284678	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	False	NA	36	True	AATAAA	-19	NA	3594446	3615821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3598971_3600988_3601089_3604411_3607058_3609991_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.3	chr13	+	2298	11	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	591.886847294312	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTATTGAGTGTCTGT	NA	False	NA	37	True	AATAAA	-20	NA	3588058	3615822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606273_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.30	chr13	+	5709	10	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	7451	1662	7069	389	3prime_fragment	FALSE	canonical	3	1666	junction_2	148.996478539877	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTGTAGTGCAGCATT	NA	False	NA	9	True	AATAAA	-18	NA	3595513	3616209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.31	chr13	+	3815	9	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	9423	1666	-6553	385	intron_retention	FALSE	canonical	3	1666	junction_2	148.688380094075	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGACTTTTGTAGTGCAG	NA	False	NA	5	True	AATAAA	-14	NA	3597485	3616205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858
ES.8623.32	chr13	+	2372	9	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	10481	2051	-5495	0	intron_retention	FALSE	canonical	3	1666	junction_2	148.688380094075	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3598543	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858
ES.8623.33	chr13	+	1972	10	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	10799	2051	-5177	0	3prime_fragment	FALSE	canonical	3	1666	junction_2	148.996478539877	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3598861	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.34	chr13	+	1742	8	NNC	ENSMUSG00000021218.11	novel	600	3	NA	NA	1359	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	695.937893076967	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3605397	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3605512_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.35	chr13	+	1558	6	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	18665	2	2756	-2	3prime_fragment	FALSE	canonical	3	1692	junction_1	139.080696000559	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTCTTGGTATTGAGTGT	NA	False	NA	33	True	AATAAA	-16	NA	3606794	3615818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.36	chr13	+	3584	1	FSM	ENSMUSG00000113894.2	ENSMUST00000223046.2	1234	1	-3239	889	-3239	-889	mono-exon	FALSE	NA	NA	NA	NA	NA	879	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCGCAAGCAGTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	3609145	3612729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3609100_3612700
ES.8623.4	chr13	+	2764	12	NNC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	3	383	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	737.613014173209	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGACTTTTGTAGTGC	NA	False	NA	3	True	AATAAA	-12	NA	3588065	3616203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3588344_3588672_3588805_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8623.6	chr13	+	3684	7	ISM	ENSMUSG00000021218.11_ENSMUSG00000113894.2	ENSMUST00000221875.2	2009	8	-56	-1458	9	697	intron_retention	FALSE	canonical	3	1666	junction_3	136.299506805988	881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCGCAAGCAGTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	3588071	3612729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991
ES.8623.7	chr13	+	2325	10	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	9	2051	9	0	intron_retention	FALSE	canonical	3	1666	junction_3	148.996478539877	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588071	3615820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858
ES.8623.8	chr13	+	4024	6	Fusion	ENSMUSG00000021218.11_ENSMUSG00000113894.2	novel	2009	8	NA	NA	-8	672	intron_retention	FALSE	canonical	3	1666	junction_3	129.32037735794	881	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3588119	3612704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3607058_3609991
ES.8623.9	chr13	+	1635	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	60	2608	-5	46	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTGAATGCTCCTTCAC	NA	False	NA	NA	False	NA	NA	NA	3588122	3615263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ES.8624.1	chr13	+	177	1	Intergenic	novelGene_7108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	3646995	3647172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3647000_3647200
ES.8625.1	chr13	+	156	1	Intergenic	novelGene_7109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAATAGGAATCAA	NA	False	NA	NA	False	NA	NA	NA	3648062	3648218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3648100_3648200
ES.8626.1	chr13	+	126	1	Intergenic	novelGene_7110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3648354	3648480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3648400_3648500
ES.8627.1	chr13	+	157	1	Intergenic	novelGene_7112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAATTCAAAAAA	6323	False	NA	NA	False	NA	NA	NA	3659103	3659260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3659100_3659300
ES.8628.1	chr13	-	6406	1	Antisense	novelGene_ENSMUSG00000021218.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTGGGAAACACAAATGG	3300	False	NA	NA	False	NA	NA	NA	3598188	3591782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_3591800_3598200
ES.8628.2	chr13	-	7368	5	Antisense	novelGene_ENSMUSG00000021218.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGAATTCCTTGGTCC	4196	False	NA	NA	False	NA	NA	NA	3607003	3592114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_3598971_3600988_3601088_3604410_3604547_3606313_3606513_3606925
ES.8629.1	chr13	-	1288	1	Antisense	novelGene_ENSMUSG00000021218.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCCTCTGCTAAGTG	NA	False	NA	NA	False	NA	NA	NA	3615005	3613717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_3613700_3615000
ES.8629.10	chr13	-	7891	3	NIC	ENSMUSG00000033799.11	novel	5193	9	NA	NA	1464	-1	intron_retention	FALSE	canonical	3	75	junction_1	3	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTGTAGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	3625226	3616035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3618858_3619487_3619642_3620311
ES.8629.12	chr13	-	7833	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	43	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	26.2512198423212	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTGTAGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	3661045	3616035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650300_3650335_3660789
ES.8629.14	chr13	-	8312	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-85	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	23.6207823330365	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCATTTGTAGTCTGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	3661193	3616036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649918_3650063_3650300_3650335_3660789
ES.8629.16	chr13	-	8325	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	23.7118114027588	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTCATTTGTAGT	NA	False	NA	NA	False	AATAAA	-7	NA	3661113	3616042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640641_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.17	chr13	-	8198	20	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	1	-215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	26.3743558821717	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACACTTGGGTTTTTT	NA	False	NA	NA	False	GATAAA	-24	NA	3661087	3616249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3641581_3641680_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.18	chr13	-	8116	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-175	146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	19.3591781276421	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGGCTAAAGCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	3661283	3616429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.2	chr13	-	2274	1	Genic_Genomic	ENSMUSG00000033799.11	novel	NA	NA	NA	NA	1756	2153	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGACTTTTCTACCAC	NA	False	NA	NA	False	NA	NA	NA	3616155	3613881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_3613900_3616200
ES.8629.20	chr13	-	7911	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-103	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	19.3591781276421	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTGCTTCTCATC	NA	False	NA	NA	False	AATACA	-25	NA	3661211	3616562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.21	chr13	-	3105	14	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	8	-6247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	21.0617575984554	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGTGCTGTCTGGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	3661080	3627149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3627201_3631751_3631858_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.22	chr13	-	3455	13	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-98	-6247	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	16.9402544910701	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTGTGCTGTCTGGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	3661206	3627149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.23	chr13	-	3525	13	NIC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-82	-6248	intron_retention	FALSE	canonical	3	47	junction_4	7.27390694346733	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTGTGCTGTCTGGTG	NA	False	NA	NA	False	AATAAA	-12	NA	3661190	3627150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649857_3649938_3650063_3650191_3650335_3660789
ES.8629.24	chr13	-	6801	12	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	15	-6250	intron_retention	FALSE	non_canonical	0	0	junction_9	17.6934409101133	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAATGTTGTGCTGTCTGG	NA	False	NA	NA	False	AATAAA	-10	NA	3661073	3627152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.25	chr13	-	5863	12	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-110	-8399	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	22.971415942715	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAGAGTTAAGTAAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	3661218	3629301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3632194_3634499_3635374_3638297_3638535_3639940_3640646_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.26	chr13	-	3302	10	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-95	6108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.3874621803037	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTTTGTTTGGTGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	3661203	3637080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.27	chr13	-	3963	1	Intergenic	novelGene_7111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTGTCTGTGCATA	NA	False	NA	NA	False	NA	NA	NA	3660465	3656502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_3656500_3660500
ES.8629.28	chr13	-	4463	1	Genic_Genomic	ENSMUSG00000033799.11	novel	NA	NA	NA	NA	-32	-9808	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTTAAAATGTATGTC	NA	False	NA	NA	False	NA	NA	NA	3661140	3656677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_3656700_3661100
ES.8629.3	chr13	-	8448	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-109	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	19.3591781276421	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAGTCTGTGTGCAAC	NA	False	NA	NA	False	AATAAA	-18	NA	3661217	3616031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.4	chr13	-	8115	20	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	22.9917484897291	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGTAGTCTGTGTGCA	NA	False	NA	NA	False	AATAAA	-16	NA	3661110	3616033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3631858_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.5	chr13	-	8300	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	23.3672372731091	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661078	3616034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638529_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.7	chr13	-	8101	19	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	22.8381314234239	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661203	3616034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.8629.8	chr13	-	8321	18	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-85	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	24.3395814449118	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661193	3616034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3649651_3649752_3649919_3650063_3650191_3650335_3660789
ES.8629.9	chr13	-	9897	17	NNC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-25	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	17.9230124421092	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTTGTAGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	3661133	3616035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3616668_3616917_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649920_3650063_3650191_3650335_3660789
ES.863.1	chr1	-	181	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGACATTAATT	NA	False	NA	NA	False	NA	NA	NA	83500865	83500684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_83500700_83500900
ES.8630.1	chr13	+	2408	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	-5	2050	-5	1286	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTCCCTGTGTCTTA	NA	False	NA	4	True	AATAAA	-13	NA	3684026	3701772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
ES.8630.2	chr13	+	2201	5	NIC	ENSMUSG00000033781.8	novel	4453	6	NA	NA	14	1286	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.2614654778499	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTCCCTGTGTCTTA	NA	False	NA	4	True	AATAAA	-13	NA	3684045	3701772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3684176_3693474_3693626_3694915_3695051_3699318_3699511_3700179
ES.8630.3	chr13	+	2478	3	NNC	ENSMUSG00000033781.8	novel	838	2	NA	NA	20	1286	intron_retention	FALSE	non_canonical	0	0	junction_2	33.5	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTCCCTGTGTCTTA	NA	False	NA	4	True	AATAAA	-13	NA	3684051	3701772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3684176_3692064_3692132_3699485
ES.8630.4	chr13	+	1156	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	57	3240	0	96	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCAGTTCTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	3684088	3700582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
ES.8630.5	chr13	+	3567	5	NIC	ENSMUSG00000033781.8	novel	4453	6	NA	NA	3	1288	intron_retention	FALSE	canonical	3	52	junction_3	7.22841614740048	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCCTGTGTCTTATT	NA	False	NA	6	True	AATAAA	-15	NA	3684091	3701774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3684176_3692064_3693626_3694915_3695051_3699318_3699511_3700179
ES.8630.6	chr13	+	2402	7	NNC	ENSMUSG00000033781.8	novel	4453	6	NA	NA	24	1283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.6465287456503	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGTTTGTCCCTGTGTC	NA	False	NA	1	True	AATAAA	-10	NA	3684122	3701769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3698896_3698990_3699318_3699511_3700179
ES.8630.7	chr13	+	175	1	Intergenic	novelGene_7114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGAAATTGTTTA	NA	False	NA	NA	False	NA	NA	NA	3686341	3686516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_3686300_3686500
ES.8631.1	chr13	-	1113	1	Intergenic	novelGene_7113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	3687143	3686030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_3686000_3687100
ES.8632.1	chr13	+	5937	2	Antisense	novelGene_ENSMUSG00000021215.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTGTCCTGGAACTC	5054	False	NA	NA	False	NA	NA	NA	3929753	3935835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_3931775_3931919
ES.8633.1	chr13	-	3467	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	-15	-772	-15	129	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3968235	3932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.10	chr13	-	4274	10	NIC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-1	98	intron_retention	FALSE	canonical	3	132	junction_7	28.554474687715	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCACACACATA	NA	False	NA	-32	True	TATAAA	-15	NA	3968179	3932591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3934474_3934802_3934990_3936047_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.11	chr13	-	2174	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	43	463	1	-463	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTATTTGGAACATGCC	NA	False	NA	NA	False	AAAAAG	-10	NA	3968177	3933795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.12	chr13	-	1840	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	36	1995	1	-680	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGAGCATCAAGGGTTA	NA	False	NA	NA	False	TATAAA	-20	NA	3943542	3934012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ES.8633.13	chr13	-	1673	10	ISM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	11	2383	11	-879	5prime_fragment	FALSE	canonical	3	132	junction_7	27.6164202362773	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACATCTCAACTAGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	3968209	3935715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.14	chr13	-	890	1	NIC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTGGACTACTCTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	3968198	3967308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3967300_3968200
ES.8633.2	chr13	-	3355	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	-27	543	-27	129	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3943605	3932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ES.8633.3	chr13	-	4806	10	NIC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-9	129	combination_of_known_junctions	FALSE	canonical	3	132	junction_7	27.6164202362773	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3968187	3932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.6	chr13	-	3748	11	NIC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-9	129	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	26.58288923349	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3968187	3932560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8633.7	chr13	-	4346	9	NIC	ENSMUSG00000021215.16	novel	3871	10	NA	NA	1	125	intron_retention	FALSE	canonical	3	47	junction_8	53.4462346662513	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATTTCTCTCCTGGTG	NA	False	NA	-5	True	ATTAAA	-25	NA	3943542	3932564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_3934474_3934802_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ES.8633.8	chr13	-	3250	9	NNC	ENSMUSG00000021215.16	novel	3871	10	NA	NA	0	123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	79.6959064193388	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACATTTCTCTCCTGG	NA	False	NA	-7	True	ATTAAA	-23	NA	3943543	3932566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937694_3938354_3938523_3938870_3938979_3943292
ES.8633.9	chr13	-	2936	13	NNC	ENSMUSG00000021215.16	novel	2680	12	NA	NA	-17	98	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57.5969593140317	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCACACACATA	NA	False	NA	-32	True	TATAAA	-15	NA	3968195	3932591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_3933677_3934136_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ES.8634.1	chr13	+	3260	1	NIC	ENSMUSG00000021216.8	novel	1341	4	NA	NA	9	-11964	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTCATGGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	3968282	3971542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_3968300_3971500
ES.8635.1	chr13	+	1223	9	FSM	ENSMUSG00000021213.13	ENSMUST00000021634.4	1262	9	39	0	5	0	multi-exon	FALSE	canonical	1	2	junction_3	2.98956518577535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	7396	False	NA	NA	False	AATAAA	-17	NA	4241187	4255595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_4241310_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
ES.8635.2	chr13	+	1361	10	NIC	ENSMUSG00000021213.13	novel	1262	9	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.02254900194121	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	7399	False	NA	NA	False	AATAAA	-17	NA	4241190	4255595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_4241310_4242293_4242435_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
ES.8636.1	chr13	+	453	3	NNC	ENSMUSG00000071551.14	novel	5832	10	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTCGGTTGTTTGTTTCC	NA	False	NA	NA	False	TATAAA	-19	NA	4295499	4298358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_4295588_4296801_4296885_4298076
ES.8636.2	chr13	+	564	3	NNC	ENSMUSG00000071551.14	novel	5832	10	NA	NA	249	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTCGGTTGTTTGTTTCC	NA	False	NA	NA	False	TATAAA	-19	NA	4295575	4298358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_4295775_4296801_4296885_4298076
ES.8637.1	chr13	-	3436	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	28	-1	-12	1	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTCTATACTGTGAA	NA	False	NA	NA	False	NA	NA	NA	4659145	4640747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ES.8637.2	chr13	-	1677	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	44	1742	4	-1735	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTCTGTGTAAAGACAC	NA	False	NA	NA	False	AATAAA	-18	NA	4659129	4642490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ES.8637.3	chr13	-	1519	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	4	1940	4	-1933	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTTTAATTTTT	NA	False	NA	NA	False	AAGAAA	-31	NA	4659169	4642688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ES.8637.4	chr13	-	1400	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	-36	2099	-36	-2092	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAGTATAATTAATATC	NA	False	NA	NA	False	AAGAAA	-43	NA	4659209	4642847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ES.8637.5	chr13	-	3663	9	NIC	ENSMUSG00000045410.19	novel	3463	10	NA	NA	-15	-2133	intron_retention	FALSE	canonical	3	141	junction_4	14.4719556384063	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTTGACAGAAGTGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	4659188	4642888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4651295_4652679_4652797_4657389_4657558_4659083
ES.8637.6	chr13	-	1343	10	NIC	ENSMUSG00000045410.19	novel	3463	10	NA	NA	-9	-2140	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	51.03593505234	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTGCTTGACAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	4659142	4642895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651353_4652679_4652797_4657389_4657558_4659083
ES.8638.1	chr13	+	172	1	Intergenic	novelGene_7115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGGGGTACAGAA	NA	False	NA	NA	False	NA	NA	NA	4669421	4669593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_4669400_4669600
ES.8639.1	chr13	-	8563	1	Intergenic	novelGene_7116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGCTGAAGCTGAGAG	NA	False	NA	NA	False	TATAAA	-43	NA	4708409	4699846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_4699800_4708400
ES.864.1	chr1	+	177	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGGTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	83602429	83602606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_83602400_83602600
ES.8640.1	chr13	-	158	1	Intergenic	novelGene_7117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5413274	5413116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_5413100_5413300
ES.8641.1	chr13	+	4029	5	NNC	ENSMUSG00000000078.8	novel	1115	5	NA	NA	-124	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.5602053049773	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGATTGTTTTTC	NA	False	NA	9	True	CATAAA	-19	NA	5911356	5920394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_5911394_5911714_5911842_5914766_5915344_5916637_5916762_5917230
ES.8641.10	chr13	+	4628	3	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	63	3	4	-3	intron_retention	FALSE	canonical	3	176	junction_1	9.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGAGCCTGATTGTT	NA	False	NA	5	True	CATAAA	-15	NA	5911543	5920390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_5911842_5914766_5915344_5916637
ES.8641.2	chr13	+	4254	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	-24	-5	-24	5	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGATTGTTTTTCTGGG	NA	False	NA	13	True	CATAAA	-23	NA	5911456	5920398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ES.8641.3	chr13	+	4310	5	FSM	ENSMUSG00000000078.8	ENSMUST00000222857.2	1115	5	-76	-3119	-17	0	multi-exon	FALSE	canonical	3	6	junction_1	94.5119040121402	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGATTGTTTTT	NA	False	NA	8	True	CATAAA	-18	NA	5911463	5920393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_5911842_5913556_5913625_5914766_5915344_5916637_5916762_5917230
ES.8641.4	chr13	+	1610	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	-15	2630	-15	489	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	5911465	5917763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ES.8641.6	chr13	+	3640	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	14	571	14	-571	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTGTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	5911494	5919822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ES.8642.1	chr13	+	173	1	Intergenic	novelGene_7118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGATGTATTTAATGC	NA	False	NA	NA	False	NA	NA	NA	6442406	6442579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_6442400_6442600
ES.8643.10	chr13	+	3949	26	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1	-7	intron_retention	FALSE	canonical	2	19	junction_14	268.783648312169	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTCTGAGTTTTACT	NA	False	NA	9	True	TATAAA	-10	NA	6598195	6630071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606581_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613505_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.100	chr13	+	2980	18	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	9267	-7	intron_retention	FALSE	canonical	2	2	junction_14	309.438961005616	888	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTCTGAGTTTTACT	2544	False	NA	9	True	TATAAA	-10	NA	6607537	6630071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613505_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.101	chr13	+	3640	17	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-6911	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	245.800787923371	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	5134	False	NA	16	True	TATAAA	-17	NA	6610127	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6610180_6610637_6610735_6611988_6612124_6613411_6614789_6614836_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.102	chr13	+	1839	14	NNC	ENSMUSG00000021193.11	novel	3318	26	NA	NA	-3551	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	269.76005116974	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAACCTGTCTGAGTTTTA	8494	False	NA	7	True	TATAAA	-8	NA	6613487	6630069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620743_6623084_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.103	chr13	+	3192	12	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-2680	136	intron_retention	FALSE	canonical	1	1	junction_7	291.00822174634	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	9365	False	NA	NA	False	NA	NA	NA	6614358	6630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623212_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.104	chr13	+	5284	11	NNC	ENSMUSG00000021193.11	novel	3318	26	NA	NA	-2668	-2	intron_retention	FALSE	canonical	1	1	junction_6	305.123319331709	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTACTCATTA	9377	False	NA	14	True	TATAAA	-15	NA	6614370	6630076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623212_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.106	chr13	+	4807	10	NIC	ENSMUSG00000021193.11	novel	3318	26	NA	NA	-1238	-216	intron_retention	FALSE	canonical	3	817	junction_4	106.55515003978	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAGAGTTACTAGTTTC	NA	False	NA	NA	False	NA	NA	NA	6615800	6629862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.107	chr13	+	4798	10	NIC	ENSMUSG00000021193.11	novel	3318	26	NA	NA	-1018	-5	intron_retention	FALSE	canonical	3	817	junction_4	106.55515003978	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCTGAGTTTTACTCA	NA	False	NA	11	True	TATAAA	-12	NA	6616020	6630073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.108	chr13	+	3085	12	ISM	ENSMUSG00000021193.11	ENSMUST00000021611.10	3318	26	17924	-136	-930	136	3prime_fragment	FALSE	canonical	3	817	junction_5	97.7148829355459	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6616108	6630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.109	chr13	+	2797	2	NNC	ENSMUSG00000021193.11	novel	495	3	NA	NA	-673	5324	intron_retention	FALSE	non_canonical	0	0	junction_1	0	866	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACCTGAAATCTTATTA	NA	False	NA	NA	False	AATAAA	-22	NA	6624200	6635875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6626671_6635548
ES.8643.11	chr13	+	3711	28	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	265.657493735923	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598195	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6616625_6616916_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.110	chr13	+	4273	1	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1029	97	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAAAAAAAT	NA	False	NA	113	True	AAGAAA	-30	NA	6625902	6630175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6625900_6630200
ES.8643.12	chr13	+	5655	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1	-4	intron_retention	FALSE	canonical	3	52	junction_4	205.538317595528	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598195	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605393_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.13	chr13	+	5882	24	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	1	-6	intron_retention	FALSE	canonical	1	1	junction_11	272.24762857836	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598195	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605393_6605505_6605587_6605685_6606577_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610731_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6629557_6629685
ES.8643.14	chr13	+	4479	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	0	intron_retention	FALSE	canonical	3	577	junction_1	114.281757074347	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598196	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.15	chr13	+	3111	25	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	228.321832891644	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAGCCTCTGAAACAT	NA	False	NA	2	True	ATTAAA	-15	NA	6598196	6630009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.16	chr13	+	3362	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	318.408814383213	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTCTGAGTTTTACT	NA	False	NA	9	True	TATAAA	-10	NA	6598196	6630071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605591_6605685_6606581_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613505_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.18	chr13	+	4001	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-4	intron_retention	FALSE	canonical	3	577	junction_1	113.886076409717	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598196	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.19	chr13	+	3389	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	209.967354464518	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598196	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618726_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.2	chr13	+	3464	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-35	2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	220.111016233753	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTACTCATTATTTT	NA	False	NA	18	True	TATAAA	-19	NA	6598149	6630080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602677_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.20	chr13	+	7091	26	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-4	intron_retention	TRUE	canonical	0	0	junction_14	226.008828146159	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598196	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6614791_6614836_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.21	chr13	+	3267	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	220.622515623406	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598196	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599615_6599719_6602669_6602777_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.22	chr13	+	3462	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	-4	combination_of_known_junctions	FALSE	canonical	1	17	junction_1	197.666834635436	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598196	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598312_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.23	chr13	+	5070	28	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	2	1226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	206.086947437187	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTCATTTCAAGACC	NA	False	NA	NA	False	AATAAA	-16	NA	6598196	6631777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685_6630154_6630202
ES.8643.25	chr13	+	3420	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTACTCATTATTT	NA	False	NA	17	True	TATAAA	-18	NA	6598197	6630079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.28	chr13	+	5420	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	-1526	4	1526	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGTCTGACCTTGAATT	NA	False	NA	NA	False	NA	NA	NA	6598198	6632077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.29	chr13	+	3864	25	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-6	intron_retention	FALSE	canonical	2	3	junction_15	217.175488276954	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598198	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.3	chr13	+	3242	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-32	-222	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATCACAAGAGTTACT	NA	False	NA	NA	False	AAGAAA	-44	NA	6598152	6629856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.30	chr13	+	3412	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	270.449811594898	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTACTCATTA	NA	False	NA	14	True	TATAAA	-15	NA	6598198	6630076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613409_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618940_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.34	chr13	+	3385	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	269.237340579144	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTACTCATTA	NA	False	NA	14	True	TATAAA	-15	NA	6598198	6630076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610731_6611988_6612106_6613420_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.35	chr13	+	2226	18	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-1532	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	107.960745140766	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTCTGTAATAATTTC	NA	False	NA	NA	False	NA	NA	NA	6598198	6619160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934
ES.8643.36	chr13	+	1870	15	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	15287	4	-5428	5prime_fragment	FALSE	canonical	3	407	junction_1	154.246886648698	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTATGCCTTGCAAAT	NA	False	NA	NA	False	AAAACA	-33	NA	6598198	6615264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026
ES.8643.39	chr13	+	3437	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_26	205.694709726496	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598198	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629660
ES.8643.4	chr13	+	3585	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	-16	337	-14	136	multi-exon	FALSE	canonical	3	407	junction_1	134.848435629472	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598170	6630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.40	chr13	+	1614	3	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	12	26438	4	810	intron_retention	FALSE	canonical	3	407	junction_1	308	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGATAGATGATGT	NA	False	NA	NA	False	NA	NA	NA	6598198	6604113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6598266_6599615_6599719_6602669
ES.8643.43	chr13	+	6126	24	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	4	-4	intron_retention	FALSE	canonical	2	3	junction_15	220.631059173933	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598198	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.45	chr13	+	2900	22	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	13	5723	5	-3725	5prime_fragment	FALSE	canonical	3	407	junction_1	132.647368096915	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCTTTAATGTAAT	NA	False	NA	NA	False	NA	NA	NA	6598199	6624828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395
ES.8643.46	chr13	+	3340	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-71	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	209.530854515708	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTAAGCCTCTGAAAC	NA	False	NA	0	True	ATTAAA	-13	NA	6598199	6630007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620733_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.47	chr13	+	3285	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_23	212.334091469081	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598199	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6628476_6628623_6629453_6629557_6629685
ES.8643.49	chr13	+	3749	25	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-6	intron_retention	FALSE	canonical	3	577	junction_1	116.530724370109	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598199	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.5	chr13	+	3537	28	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	260.085645912797	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598177	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6598765_6598864_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.50	chr13	+	3405	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	200.595522406328	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598199	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599624_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.51	chr13	+	9485	22	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-69	intron_retention	FALSE	canonical	1	1	junction_7	290.582111835572	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAGCCTCTGAAACAT	NA	False	NA	2	True	ATTAAA	-15	NA	6598199	6630009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606581_6606739_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.52	chr13	+	3198	15	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-4096	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	118.890963594757	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAATAAGTTTCTATTT	NA	False	NA	NA	False	AGTAAA	-13	NA	6598199	6616596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026
ES.8643.55	chr13	+	8643	24	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	136	intron_retention	FALSE	canonical	3	407	junction_1	141.734849228488	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598199	6630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.56	chr13	+	3266	26	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	226.20264896769	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAGTTTTACTCATTAT	NA	False	NA	15	True	TATAAA	-16	NA	6598199	6630077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615124_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.58	chr13	+	2348	19	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	13	11047	5	-1188	5prime_fragment	FALSE	canonical	3	407	junction_1	136.244571757312	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCTGGGCTTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	6598199	6619504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235
ES.8643.62	chr13	+	6652	25	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-66	intron_retention	FALSE	canonical	3	577	junction_1	116.525681182304	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCCTCTGAAACATTAC	NA	False	NA	5	True	ATTAAA	-18	NA	6598199	6630012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.63	chr13	+	3444	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-49	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	206.485811940056	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAAGCCTAGAATATGTA	NA	False	NA	22	True	ATTAAA	-35	NA	6598199	6630029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599618_6599795_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.66	chr13	+	3547	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	136	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_19	202.557932395479	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGCTGCTCTTGCAAG	NA	False	NA	NA	False	NA	NA	NA	6598199	6630214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620643_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.70	chr13	+	5123	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	5	-66	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	210.001567337065	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCCTCTGAAACATTAC	NA	False	NA	5	True	ATTAAA	-18	NA	6598199	6630012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6616916_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.72	chr13	+	6209	25	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	6	-6	intron_retention	FALSE	canonical	2	19	junction_14	213.114369236333	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598200	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613505_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.8	chr13	+	3994	26	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-2	0	intron_retention	FALSE	canonical	2	9	junction_7	211.876945418797	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598182	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607822_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.81	chr13	+	5798	26	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	7	-6	intron_retention	FALSE	canonical	0	0	junction_21	268.593206168734	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598201	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605393_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6624901_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.84	chr13	+	4007	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	221.145752360253	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598202	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6627882_6628623_6629453_6629557_6629685
ES.8643.86	chr13	+	3365	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-7	-66	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	221.378908891012	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCCTCTGAAACATTAC	NA	False	NA	5	True	ATTAAA	-18	NA	6598202	6630012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623212_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.88	chr13	+	3282	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-5	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	225.893341203321	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	NA	False	NA	12	True	TATAAA	-13	NA	6598204	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.89	chr13	+	3378	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	312.765342970275	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598207	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607822_6607925_6608191_6608281_6609390_6609524_6610065_6610180_6610637_6610731_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.9	chr13	+	3446	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	221.906628506559	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598182	6630078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618925_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.90	chr13	+	3434	28	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	-1	121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	206.086947437187	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCTAAATCAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	6598208	6630199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685_6630078_6630172
ES.8643.93	chr13	+	3386	27	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	206.948629391694	889	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	False	NA	10	True	TATAAA	-11	NA	6598217	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603224_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.97	chr13	+	2872	22	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	7400	479	7316	-6	3prime_fragment	FALSE	canonical	3	789	junction_8	88.5772911526228	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	593	False	NA	10	True	TATAAA	-11	NA	6605586	6630072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ES.8643.98	chr13	+	4271	21	NNC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	8389	1226	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	294.530554442149	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTTTCATTTCAAGACC	1666	False	NA	NA	False	AATAAA	-16	NA	6606659	6631777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685_6630154_6630202
ES.8643.99	chr13	+	6712	16	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	8766	-4	intron_retention	FALSE	canonical	3	789	junction_5	99.3028141035736	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTGAGTTTTACTCAT	2043	False	NA	12	True	TATAAA	-13	NA	6607036	6630074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619402_6620637_6620739_6623076_6623198_6624395_6627552_6628476_6628623_6629453_6629557_6629685
ES.8644.1	chr13	+	2190	1	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	6643752	6645942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6643800_6645900
ES.8644.2	chr13	+	2397	1	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCACAAAATCCCTCTAAA	NA	False	NA	NA	False	NA	NA	NA	6643752	6646149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6643800_6646100
ES.8644.3	chr13	+	5813	16	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTTTCCACTGAGGTA	NA	False	NA	NA	False	NA	NA	NA	6643753	6686695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6648050_6648776_6648863_6650631_6650703_6652747_6652896_6653114_6653184_6653433_6653500_6654991_6655117_6655670_6655765_6664739_6664838_6669213_6669322_6669556_6669601_6670921_6671090_6671943_6672132_6675170_6675249_6685959_6686037_6686598
ES.8644.4	chr13	+	4672	1	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCCGAAGAGAAACATTAAC	NA	False	NA	NA	False	CATAAA	-34	NA	6643756	6648428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6643800_6648400
ES.8644.5	chr13	+	2205	14	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGCCCCGCCCGAGCG	NA	False	NA	NA	False	NA	NA	NA	6648136	6698822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6648863_6652748_6652896_6653114_6653184_6653433_6653500_6654991_6655117_6655670_6655765_6664739_6664834_6669206_6669322_6669556_6669601_6670921_6671090_6671943_6672132_6675170_6675249_6685959_6686037_6698608
ES.8644.6	chr13	+	2346	1	Antisense	novelGene_ENSMUSG00000021196.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAACAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	6697222	6699568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_6697200_6699600
ES.8645.1	chr13	-	3992	6	FSM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-1418	106	-1418	-106	multi-exon	FALSE	canonical	3	1227	junction_2	102.634107391257	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGCTAACTGATTTTCC	8365	False	NA	-8	True	AATAAA	-19	NA	6640420	6629909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524
ES.8645.14	chr13	-	2759	22	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-102	8	combination_of_known_junctions	FALSE	canonical	3	34	junction_21	282.175103642483	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6686788	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686561
ES.8645.15	chr13	-	5391	8	NNC	ENSMUSG00000021196.15	novel	2679	22	NA	NA	855	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	633.542808179462	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	1725	False	NA	-6	True	ATTAAA	-18	NA	6647060	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6640905_6643136_6643290_6644998
ES.8645.16	chr13	-	3993	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	375.380810423851	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698759	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648077_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6654779_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.17	chr13	-	4139	5	ISM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-1490	1406	-1490	8	intron_retention	FALSE	canonical	3	1227	junction_2	109.771068592776	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	8293	False	NA	-6	True	ATTAAA	-18	NA	6640492	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087
ES.8645.19	chr13	-	2491	6	NNC	ENSMUSG00000021196.15	novel	2680	6	NA	NA	-1120	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	547.536081002887	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	8663	False	NA	-6	True	ATTAAA	-18	NA	6640122	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636418_6636628_6637087_6637150_6638524
ES.8645.2	chr13	-	3731	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	702	-107	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	288.44028923421	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGCTAACTGATTTTC	NA	False	NA	-9	True	AATAAA	-18	NA	6685984	6629910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6630152_6630201_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960
ES.8645.20	chr13	-	7978	3	ISM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-3090	1406	-3090	8	intron_retention	FALSE	canonical	3	1227	junction_2	94.5	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	6693	False	NA	-6	True	ATTAAA	-18	NA	6642092	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6631629_6632438_6632542_6634636
ES.8645.21	chr13	-	2126	18	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	1057	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	314.606031438212	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	3405	False	NA	-6	True	ATTAAA	-18	NA	6671031	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637095_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921
ES.8645.22	chr13	-	2606	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-20	8	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698833	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.23	chr13	-	5059	4	NNC	ENSMUSG00000021196.15	novel	2680	6	NA	NA	-3330	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	627.721275726735	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	6453	False	NA	-6	True	ATTAAA	-18	NA	6642332	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634955_6638113
ES.8645.24	chr13	-	7443	22	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2	8	intron_retention	FALSE	canonical	3	19	junction_6	286.268351658016	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698759	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.27	chr13	-	3485	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-19	8	intron_retention	FALSE	canonical	3	963	junction_14	146.868401979459	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698832	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.28	chr13	-	4623	22	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-9	8	intron_retention	FALSE	canonical	2	6	junction_6	288.666886615995	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698822	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6646019_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.29	chr13	-	3051	25	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	459.984533254471	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACTTGGTTTATTGT	NA	False	NA	-6	True	ATTAAA	-18	NA	6698759	6631209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6640953_6641053_6642518_6642633_6643136_6643290_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.3	chr13	-	9496	17	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2486	69	intron_retention	FALSE	canonical	1	2	junction_6	327.181882712047	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAAGGTTTCCTTCCTCA	4834	False	NA	55	True	NA	NA	NA	6669602	6631148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6646099_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555
ES.8645.31	chr13	-	2694	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-10	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	288.81898857808	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTACTTGGTTTATTG	NA	False	NA	-7	True	ATTAAA	-17	NA	6698771	6631210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685962_6686035_6698606
ES.8645.34	chr13	-	2737	22	NNC	ENSMUSG00000021196.15	novel	2679	22	NA	NA	-8	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	435.401219821698	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTACTTGGTTTATTG	NA	False	NA	-7	True	ATTAAA	-17	NA	6698821	6631210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655109_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.37	chr13	-	5129	4	ISM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-2022	1408	-2022	6	intron_retention	FALSE	canonical	3	1227	junction_2	123.110609706159	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTACTTGGTTTATT	7761	False	NA	-8	True	ATTAAA	-16	NA	6641024	6631211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515
ES.8645.38	chr13	-	10170	6	FSM	ENSMUSG00000021196.15	ENSMUST00000131648.8	2680	6	-8899	1409	14	5	multi-exon	FALSE	canonical	3	1227	junction_2	102.634107391257	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGGTACTTGGTTTAT	884	False	NA	-9	True	ATTAAA	-15	NA	6647901	6631212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524
ES.8645.39	chr13	-	3176	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	1432	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	288.44028923421	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGGTACTTGGTTTAT	NA	False	NA	-9	True	ATTAAA	-15	NA	6697329	6631212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6696682
ES.8645.40	chr13	-	3524	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	289.776127521976	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATGGTACTTGGTTTA	NA	False	NA	-10	True	ATTAAA	-14	NA	6698759	6631213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647051_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.43	chr13	-	6327	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-21	4	intron_retention	FALSE	canonical	0	0	junction_6	296.931519882952	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATGGTACTTGGTTTA	NA	False	NA	-10	True	ATTAAA	-14	NA	6698782	6631213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6644998_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.44	chr13	-	2952	23	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-91	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	365.876579583339	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATGGTACTTGGTTTA	NA	False	NA	-10	True	ATTAAA	-14	NA	6686777	6631213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686155_6686399_6686596
ES.8645.45	chr13	-	2894	23	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-6	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	364.829941703852	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATGGTACTTGGTTTA	NA	False	NA	-10	True	ATTAAA	-14	NA	6698819	6631213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.46	chr13	-	2100	18	ISM	ENSMUSG00000021196.15	ENSMUST00000021614.14	2679	22	27758	-2	1085	2	3prime_fragment	FALSE	canonical	2	17	junction_7	407.049192337608	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	3433	False	NA	-12	True	ATTAAA	-12	NA	6671003	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921
ES.8645.47	chr13	-	5319	5	NIC	ENSMUSG00000021196.15	novel	2680	6	NA	NA	-2272	2	intron_retention	FALSE	canonical	3	1227	junction_2	86.0475885774843	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	7511	False	NA	-12	True	ATTAAA	-12	NA	6641274	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6636628_6637087_6637150_6638524
ES.8645.48	chr13	-	2808	23	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-9	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	354.644161667662	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6698822	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6635242_6635309_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.49	chr13	-	2252	18	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-10	2	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	285.511669629824	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6698771	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.5	chr13	-	4059	23	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	425.833400182212	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGGTTTATTGTTT	NA	False	NA	-4	True	ATTAAA	-20	NA	6698759	6631207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6654779_6654991_6655118_6655671_6655765_6664508_6664602_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.50	chr13	-	2623	22	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	374.611659844712	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6698777	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6646019_6646099_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.51	chr13	-	2859	23	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-28	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	361.010072888933	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6686714	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686183_6686399_6686596
ES.8645.53	chr13	-	2798	23	NIC	ENSMUSG00000021196.15	novel	2679	22	NA	NA	14	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	427.424279215407	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6698799	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6646019_6646099_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.54	chr13	-	1484	12	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-641	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	390.440268550498	1004	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6653488	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632502_6634650_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434
ES.8645.56	chr13	-	2711	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-91	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	362.626742250225	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6686777	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685956_6686035_6686596
ES.8645.57	chr13	-	4002	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_12	288.281333048338	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCATGGTACTTGGTT	NA	False	NA	-12	True	ATTAAA	-12	NA	6698803	6631215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6654779_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.58	chr13	-	3588	1	NIC	ENSMUSG00000021196.15	novel	2680	6	NA	NA	1349	314	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	992	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTAATGGTTTCATCT	5017	False	NA	NA	False	TTTAAA	-11	NA	6635782	6632194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6632200_6635800
ES.8645.59	chr13	-	3512	16	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	2040	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.483729562383	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATACTAGTAATTATTTT	NA	False	NA	NA	False	NA	NA	NA	6698813	6646290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6648178_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.6	chr13	-	3075	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	-334	1404	-334	10	multi-exon	FALSE	canonical	3	963	junction_15	143.890705562911	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGGTTTATTGTTT	NA	False	NA	-4	True	ATTAAA	-20	NA	6699147	6631207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.60	chr13	-	3033	16	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	54	16782	2	1745	5prime_fragment	FALSE	canonical	3	963	junction_9	79.1197123913433	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCATAAACTCATTTAAA	NA	False	NA	NA	False	NA	NA	NA	6698759	6646585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.61	chr13	-	1727	10	ISM	ENSMUSG00000021196.15	ENSMUST00000148999.8	1726	13	2	1958	2	-1958	5prime_fragment	FALSE	canonical	3	963	junction_3	85.5375161357089	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGAGTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	6698759	6654394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.62	chr13	-	7077	3	NIC	ENSMUSG00000021196.15	novel	931	7	NA	NA	8	651	intron_retention	FALSE	canonical	3	1232	junction_1	9.5	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCATATGTGTGGGCAA	NA	False	NA	NA	False	NA	NA	NA	6698805	6668445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6675250_6685960_6686035_6698606
ES.8645.63	chr13	-	6857	4	NIC	ENSMUSG00000021196.15	novel	931	7	NA	NA	-8	651	intron_retention	FALSE	canonical	3	1140	junction_1	48.4722142629729	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCATATGTGTGGGCAA	NA	False	NA	NA	False	NA	NA	NA	6698821	6668445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_6669320_6669555_6675250_6685960_6686035_6698606
ES.8645.64	chr13	-	1595	7	FSM	ENSMUSG00000021196.15	ENSMUST00000137327.2	931	7	-38	-626	14	626	multi-exon	FALSE	canonical	3	1119	junction_4	51.1913621185797	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-43	NA	6698799	6668470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ES.8645.7	chr13	-	2974	24	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	465.012270911531	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGGTTTATTGTTT	NA	False	NA	-4	True	ATTAAA	-20	NA	6698813	6631207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6646019_6646095_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6688506_6688665_6698606
ES.8645.9	chr13	-	2732	22	NNC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	-109	9	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_21	274.502022841759	1011	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGTTTATTGTT	NA	False	NA	-5	True	ATTAAA	-19	NA	6686795	6631208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6686596
ES.8646.1	chr13	+	8792	1	Intergenic	novelGene_7119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6995258	7004050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_6995300_7004000
ES.8647.1	chr13	-	177	1	Intergenic	novelGene_7120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	7191272	7191095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_7191100_7191300
ES.8648.1	chr13	-	2712	3	NIC	ENSMUSG00000113241.2	novel	1355	5	NA	NA	-1611	113	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTATCAAAATTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	7215982	7204018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_7204831_7211128_7211241_7214194
ES.8649.1	chr13	-	175	1	Intergenic	novelGene_7121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGGAATGCATACA	NA	False	NA	NA	False	NA	NA	NA	7799782	7799607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_7799600_7799800
ES.865.1	chr1	-	8069	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTGTTCTATTCGCG	NA	False	NA	NA	False	NA	NA	NA	83966976	83958907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_83958900_83967000
ES.865.2	chr1	-	6859	3	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGGTGTTGTGTTCTA	NA	False	NA	NA	False	NA	NA	NA	83966974	83958913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_83961438_83962008_83962093_83962723
ES.865.3	chr1	-	7845	2	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAAGGTGTTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	83966973	83958914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_83966542_83966755
ES.8650.1	chr13	+	1211	3	Intergenic	novelGene_7122	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAACTGGTGGTTGCA	NA	False	NA	NA	False	NA	NA	NA	7878970	7881156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_7879147_7879462_7879570_7880228
ES.8651.1	chr13	-	4082	5	NNC	ENSMUSG00000113508.2	novel	1396	2	NA	NA	1143	67260	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTACTTGTTTTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	8080246	7996471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_7999176_8006282_8007352_8066108_8066168_8079871_8080104_8080228
ES.8651.2	chr13	-	3997	2	Intergenic	novelGene_7123	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	8005579	7999232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_8002624_8004973
ES.8652.1	chr13	+	171	1	Intergenic	novelGene_7124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTCTAAAAAATAAGAATT	NA	False	NA	NA	False	AATAAA	-9	NA	8632513	8632684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_8632500_8632700
ES.8653.1	chr13	+	5023	1	Antisense	novelGene_ENSMUSG00000021147.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGTGAAGCTATTTTA	NA	False	NA	NA	False	AAAAAG	-42	NA	8900924	8905947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_8900900_8905900
ES.8654.1	chr13	+	2960	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	80	-13	80	13	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTAGTTTTATTTTCT	NA	False	NA	88	True	TATAAA	-19	NA	8935616	8942500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ES.8654.10	chr13	+	2542	5	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-18	-105	intron_retention	TRUE	canonical	0	0	junction_3	245.533093492507	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAATAAATTATT	NA	False	NA	-30	True	NA	NA	NA	8935960	8942382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_8936033_8936767_8936941_8937520_8937614_8937914_8938090_8940353
ES.8654.12	chr13	+	2500	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	428	99	-14	-99	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATTATTTTAATA	NA	False	NA	-24	True	NA	NA	NA	8935964	8942388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ES.8654.13	chr13	+	1042	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	428	1557	-14	294	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTGAGGAAGTAACTAG	NA	False	NA	NA	False	AGTAAA	-36	NA	8935964	8940930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ES.8654.14	chr13	+	2467	4	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	1230	65	-338	-65	3prime_fragment	FALSE	canonical	3	573	junction_1	25.5907969568923	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGGATATTATGGTT	NA	False	NA	10	True	AATAAA	-26	NA	8936766	8942422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_8936941_8937520_8937614_8937958_8938090_8940353
ES.8654.15	chr13	+	2450	4	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-338	-76	intron_retention	FALSE	non_canonical	0	0	junction_2	279.760611952433	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8936766	8942411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_8936941_8937520_8937608_8937958_8938090_8940353
ES.8654.2	chr13	+	6794	1	NIC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	81	-76	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8935617	8942411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_8935600_8942400
ES.8654.3	chr13	+	4769	5	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-40	-78	intron_retention	FALSE	non_canonical	0	0	junction_4	250.233266173784	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTTGTTAATATCT	NA	False	NA	-3	True	AATAAA	-13	NA	8935938	8942409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938259_8938300
ES.8654.4	chr13	+	5726	2	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	412	78	-30	-78	intron_retention	FALSE	canonical	3	487	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTTGTTAATATCT	NA	False	NA	-3	True	AATAAA	-13	NA	8935948	8942409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_8936033_8936767
ES.8654.5	chr13	+	2347	4	NIC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-18	-83	intron_retention	FALSE	canonical	1	10	junction_1	289.359061836098	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTCTGGCTTGTTAA	NA	False	NA	-8	True	AATAAA	-8	NA	8935960	8942404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_8936033_8937520_8937614_8937958_8938090_8940353
ES.8654.6	chr13	+	2574	5	FSM	ENSMUSG00000058258.15	ENSMUST00000177397.8	737	5	-18	-1819	-18	-74	multi-exon	FALSE	canonical	0	0	junction_4	250.233266173784	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTTAATATCTGGAT	NA	False	NA	1	True	AATAAA	-17	NA	8935960	8942413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938135_8940353
ES.8654.7	chr13	+	2521	5	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-18	-83	intron_retention	FALSE	non_canonical	0	0	junction_3	245.533093492507	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTCTGGCTTGTTAA	NA	False	NA	-8	True	AATAAA	-8	NA	8935960	8942404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_8936033_8936767_8936941_8937520_8937606_8937949_8938090_8940353
ES.8654.8	chr13	+	2434	4	NIC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	-18	-76	intron_retention	FALSE	canonical	1	1	junction_2	263.553072875697	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTAATATCTGG	NA	False	NA	-1	True	AATAAA	-15	NA	8935960	8942411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_8936033_8936767_8936941_8937958_8938090_8940353
ES.8654.9	chr13	+	793	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	424	1810	-18	41	multi-exon	FALSE	canonical	3	487	junction_1	56.3576747213722	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATTTGAAAAATTTTC	NA	False	NA	NA	False	AATACA	-17	NA	8935960	8940677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ES.8655.1	chr13	-	5255	1	Antisense	novelGene_ENSMUSG00000052551.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGCCCCGTCTAGA	NA	False	NA	NA	False	NA	NA	NA	8817226	8811971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_8812000_8817200
ES.8655.10	chr13	-	4776	14	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-9	8	intron_retention	FALSE	canonical	3	18	junction_13	18.3112472308122	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGTGTTATTGG	NA	False	NA	-21	True	ATTAAA	-26	NA	8921089	8853022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.11	chr13	-	4495	15	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	54	8	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	23.81058330976	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGTGTTATTGG	NA	False	NA	-21	True	ATTAAA	-26	NA	8920961	8853022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672_8920753_8920905
ES.8655.12	chr13	-	4532	15	NNC	ENSMUSG00000021147.18	novel	4626	14	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.6811291564136	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTGTGTTATTGG	NA	False	NA	-21	True	ATTAAA	-26	NA	8921771	8853022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8921518
ES.8655.14	chr13	-	4511	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	103	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	24.1594406273939	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTATTATAAAGGTTT	NA	False	NA	-31	True	ATTAAA	-16	NA	8920912	8853032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854327_8854404_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.15	chr13	-	4767	16	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	9	-2	intron_retention	TRUE	non_canonical	0	0	junction_1	29.6658426851863	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTATTATAAAGGTTT	NA	False	NA	-31	True	ATTAAA	-16	NA	8921071	8853032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854308_8854386_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8902269_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.16	chr13	-	4613	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	25.7206341369758	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTATTATAAAGGTTT	NA	False	NA	-31	True	ATTAAA	-16	NA	8921071	8853032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8902269_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.17	chr13	-	6332	13	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	2	-2	intron_retention	FALSE	canonical	3	54	junction_4	13.0437298687488	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTATTATAAAGGTTT	NA	False	NA	-31	True	ATTAAA	-16	NA	8921041	8853032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.18	chr13	-	4761	16	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	29.3436345548551	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTATTATAAAGGTT	NA	False	NA	-32	True	ATTAAA	-15	NA	8921079	8853033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8916630_8916790_8920672_8920753_8920905
ES.8655.19	chr13	-	4664	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-9	-3	intron_retention	FALSE	canonical	0	0	junction_1	24.1594406273939	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTATTATAAAGGTT	NA	False	NA	-32	True	ATTAAA	-15	NA	8921068	8853033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.2	chr13	-	5164	2	Antisense	novelGene_ENSMUSG00000052551.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	8817226	8811995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_8816739_8816805
ES.8655.20	chr13	-	4505	16	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.3950522702347	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTATTATAAAGGTT	NA	False	NA	-32	True	ATTAAA	-15	NA	8921062	8853033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672_8920753_8920905
ES.8655.21	chr13	-	4523	15	NNC	ENSMUSG00000021147.18	novel	4626	14	NA	NA	-156	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	26.6811291564136	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACTATTATAAAGGTT	NA	False	NA	-32	True	ATTAAA	-15	NA	8922101	8853033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8921518_8921600_8922007
ES.8655.22	chr13	-	4358	14	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	110	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.8647119790435	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTACTATTATAAAGGT	NA	False	NA	-33	True	ATTAAA	-14	NA	8920905	8853034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854350_8854429_8855983_8869898_8870014_8870446_8870582_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.24	chr13	-	4412	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-7	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.7040624430223	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTACTATTATAAAGGT	NA	False	NA	-33	True	ATTAAA	-14	NA	8921050	8853034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854341_8854420_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.25	chr13	-	4285	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	8	-153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.7040624430223	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTATTTTGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	8921072	8853183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854325_8854404_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.26	chr13	-	2670	15	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-6	915	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	23.81058330976	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGAAACCTTTGGAGT	NA	False	NA	NA	False	AATAAA	-22	NA	8921049	8854935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672_8920753_8920905
ES.8655.27	chr13	-	4437	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	1	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	28.3541740079564	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGAAACCTTTGGAGT	NA	False	NA	NA	False	AATAAA	-22	NA	8921042	8854935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8899497_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672_8920753_8920905
ES.8655.28	chr13	-	2505	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	108	1913	43	907	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATATTGGGAAACC	NA	False	NA	NA	False	AATAAA	-14	NA	8920972	8854943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.29	chr13	-	2249	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	7	2270	7	550	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTTTTGTGCAGAATTTC	NA	False	NA	NA	False	AAGAAA	-12	NA	8921073	8855300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.3	chr13	-	4486	2	Antisense	novelGene_ENSMUSG00000052551.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTAACTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	8817082	8811997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_8812557_8813155
ES.8655.30	chr13	-	5856	6	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-1	28	intron_retention	FALSE	canonical	3	67	junction_1	9.49526197637537	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAAACCAACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	8921081	8894461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.31	chr13	-	3807	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	-22	-5	-1	5	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTACAAGTGTGGTCTT	NA	False	NA	NA	False	NA	NA	NA	8921081	8900510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.32	chr13	-	2452	6	NNC	ENSMUSG00000021147.18	novel	3780	5	NA	NA	-9	1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	30.9283041888817	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTGTTACAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	8921068	8900514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.34	chr13	-	2015	7	NNC	ENSMUSG00000021147.18	novel	3780	5	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.8724302624098	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCCTCATCTGTTACA	NA	False	NA	NA	False	NA	NA	NA	8921050	8900521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8901849_8902269_8902377_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.35	chr13	-	3876	5	FSM	ENSMUSG00000021147.18	ENSMUST00000164183.9	1780	5	85	-2181	85	-8	multi-exon	FALSE	canonical	3	18	junction_4	30.7774267930248	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCTCCTCATCTGTTA	NA	False	NA	NA	False	NA	NA	NA	8920930	8900523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.36	chr13	-	3691	5	FSM	ENSMUSG00000021147.18	ENSMUST00000164183.9	1780	5	-57	-1854	8	-335	multi-exon	FALSE	canonical	3	18	junction_4	30.7774267930248	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATAGACTCATCATTC	NA	False	NA	NA	False	ATTAAA	-24	NA	8921072	8900850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.37	chr13	-	3433	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	11	336	-5	-336	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCATAGACTCATCATT	NA	False	NA	NA	False	ATTAAA	-23	NA	8921048	8900851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.38	chr13	-	2193	7	NNC	ENSMUSG00000021147.18	novel	3780	5	NA	NA	-8	-337	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	39.5137107006332	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCATAGACTCATCAT	NA	False	NA	NA	False	ATTAAA	-22	NA	8921067	8900852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672_8920753_8920905
ES.8655.39	chr13	-	1591	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	-2	2191	-2	1	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTGTATACAGTGTG	NA	False	NA	NA	False	ATTAAA	-21	NA	8921061	8902706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.4	chr13	-	2155	1	Intergenic	novelGene_7125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTAAAGTCATTTT	NA	False	NA	NA	False	NA	NA	NA	8817015	8814860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_8814900_8817000
ES.8655.5	chr13	-	159	2	Intergenic	novelGene_7126	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	8945588	8817214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_8817295_8945509
ES.8655.6	chr13	-	4976	14	NIC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	76	331	intron_retention	FALSE	canonical	3	18	junction_13	18.3112472308122	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGAGCTCCATTGTGTC	NA	False	NA	NA	False	ATTAAA	-31	NA	8920939	8852672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920672
ES.8655.7	chr13	-	4556	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	-1	-29	-1	2	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTGTTCTTACTCCT	NA	False	NA	0	True	TATAAA	-17	NA	8921081	8853001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.8	chr13	-	4454	15	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.7040624430223	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGTGTTCTTACTCC	NA	False	NA	-1	True	TATAAA	-16	NA	8921060	8853002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854360_8854439_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8655.9	chr13	-	4523	16	NNC	ENSMUSG00000021147.18	novel	4526	14	NA	NA	-5	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	28.9893467022322	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTGTGTTATTGGGA	NA	False	NA	-19	True	ATTAAA	-28	NA	8921048	8853020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_8854306_8854384_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8902269_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ES.8656.1	chr13	-	142	1	Intergenic	novelGene_7127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAATTTGTCTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	8952721	8952579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_8952600_8952700
ES.8657.1	chr13	+	1214	9	Antisense	novelGene_ENSMUSG00000021149.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9022947	9035772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_9023311_9024199_9024343_9024979_9025045_9027269_9027470_9028561_9028665_9029464_9029516_9029936_9030015_9035243_9035355_9035672
ES.8657.2	chr13	+	154	1	Intergenic	novelGene_7128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	9029175	9029329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9029200_9029300
ES.8658.1	chr13	+	1490	1	Intergenic	novelGene_7129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTGAACTGAATTGATC	NA	False	NA	NA	False	NA	NA	NA	9046121	9047611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9046100_9047600
ES.8658.2	chr13	+	1757	1	Intergenic	novelGene_7130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAAGGACAGCCTC	NA	False	NA	NA	False	NA	NA	NA	9046182	9047939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9046200_9047900
ES.8659.1	chr13	-	10030	1	Genic_Genomic	ENSMUSG00000021149.9	novel	NA	NA	NA	NA	8261	7277	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAATTTAAAACCAGAAC	NA	False	NA	NA	False	CATAAA	-3	NA	9019119	9009089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_9009100_9019100
ES.8659.10	chr13	-	3102	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	1	422	intron_retention	FALSE	canonical	3	688	junction_6	46.3549589819927	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAAATCATAGAATTAG	NA	False	NA	NA	False	ATTAAA	-30	NA	9046085	9022093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9042072_9042680_9042852_9045984
ES.8659.11	chr13	-	4145	15	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	38	408	intron_retention	FALSE	canonical	3	688	junction_5	47.8695079974546	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCTAGTAACTTAATTA	NA	False	NA	NA	False	ATTAAA	-16	NA	9046048	9022107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9042072_9042680_9042852_9045984
ES.8659.12	chr13	-	3175	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	-473	6081	-473	68	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCTTTCATAAACACT	NA	False	NA	NA	False	NA	NA	NA	9046592	9022447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.13	chr13	-	6279	1	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	-1383	31	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	448	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	9028763	9022484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9022500_9028800
ES.8659.14	chr13	-	4811	16	NNC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	39	31	intron_retention	FALSE	canonical	0	0	junction_10	198.421056230319	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	9046047	9022484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9023311_9024199_9024344_9024980_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037977_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.16	chr13	-	2678	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	30	27	intron_retention	FALSE	canonical	3	688	junction_6	46.3549589819927	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	9046056	9022488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9042072_9042680_9042852_9045984
ES.8659.17	chr13	-	2426	16	NIC	ENSMUSG00000021149.9	novel	2442	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	195.391982094114	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-41	NA	9046082	9022515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
ES.8659.18	chr13	-	3694	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	6	-6	intron_retention	FALSE	canonical	3	688	junction_6	48.9536742463957	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	9046080	9022521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.19	chr13	-	3226	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	6	-6	intron_retention	FALSE	canonical	3	688	junction_5	41.5352059502939	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	9046080	9022521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.2	chr13	-	8752	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	33	-2	0	2	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGAGCATTCTTGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	9046086	9016364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.20	chr13	-	4337	14	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	41	-6	intron_retention	FALSE	canonical	3	688	junction_5	49.6612191391888	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	9046045	9022521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9042852_9045984
ES.8659.22	chr13	-	5735	15	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	39	-146	intron_retention	FALSE	canonical	3	688	junction_4	50.6887259533667	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATGACTTACATTTT	NA	False	NA	-15	True	AGTAAA	-17	NA	9046047	9022661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.23	chr13	-	2986	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	-499	6296	-499	-147	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGATGACTTACATTT	NA	False	NA	-16	True	AGTAAA	-16	NA	9046618	9022662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.29	chr13	-	3819	10	NIC	ENSMUSG00000021149.9	novel	2442	16	NA	NA	1311	-154	intron_retention	FALSE	canonical	3	688	junction_5	58.0308559898403	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGTTTGATGACT	NA	False	NA	-23	True	AGTAAA	-9	NA	9037838	9022669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791
ES.8659.3	chr13	-	5493	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	24	3266	-9	2883	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGTGTGTGTGAAG	NA	False	NA	NA	False	NA	NA	NA	9046095	9019632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.30	chr13	-	2281	16	NNC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	1	-154	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	196.248096947602	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGTTTGATGACT	NA	False	NA	-23	True	AGTAAA	-9	NA	9046085	9022669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041827_9042680_9042852_9045984
ES.8659.31	chr13	-	2281	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	-5	-154	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	195.391982094114	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGTTTGATGACT	NA	False	NA	-23	True	AGTAAA	-9	NA	9046091	9022669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
ES.8659.33	chr13	-	2406	17	NNC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	30	-156	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	192.261855534971	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAACATAGTTTGATGA	NA	False	NA	-25	True	AGTAAA	-7	NA	9046056	9022671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9023311_9024199_9024344_9024980_9025034_9027267_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.35	chr13	-	2090	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	20	6673	-13	-524	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTGCTTTGCTG	NA	False	NA	NA	False	AAGAAA	-18	NA	9046099	9023039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.36	chr13	-	3144	14	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	82	9308	49	-1022	5prime_fragment	FALSE	canonical	3	688	junction_3	36.0119966861801	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTGGATCCTGCA	NA	False	NA	NA	False	ATTAAA	-12	NA	9046037	9025674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.5	chr13	-	4495	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	34	4254	1	1895	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTATTTTTAACTAGG	NA	False	NA	NA	False	CATAAA	-26	NA	9046085	9020620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.6	chr13	-	5983	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	30	1891	intron_retention	FALSE	canonical	3	688	junction_6	46.632558964264	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAATTATTTTTAAC	NA	False	NA	NA	False	CATAAA	-22	NA	9046056	9020624	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.7	chr13	-	5352	16	NIC	ENSMUSG00000021149.9	novel	8783	17	NA	NA	52	1887	intron_retention	FALSE	canonical	3	688	junction_6	49.0733691074452	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAAATGTAATTATTTT	NA	False	NA	NA	False	CATAAA	-18	NA	9046034	9020628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9041888_9041967_9042072_9042680_9042852_9045984
ES.8659.8	chr13	-	3371	14	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	4312	4922	-2658	1227	3prime_fragment	FALSE	canonical	3	688	junction_6	49.5710595088344	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGGATTTGACAATTT	NA	False	NA	NA	False	NA	NA	NA	9041807	9021288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750
ES.8659.9	chr13	-	3049	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	34	5700	1	449	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGTTCTAGACAAGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	9046085	9022066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ES.866.1	chr1	+	2832	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTTTTGTTTAAAATGA	NA	False	NA	NA	False	NA	NA	NA	84123282	84126114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84123300_84126100
ES.8660.1	chr13	-	179	1	Intergenic	novelGene_7131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATTATAAGGAT	NA	False	NA	NA	False	NA	NA	NA	9051261	9051082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9051100_9051300
ES.8661.1	chr13	+	151	1	Intergenic	novelGene_7132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGGGGGAACCCTTA	NA	False	NA	NA	False	NA	NA	NA	9058690	9058841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9058700_9058800
ES.8662.1	chr13	+	181	1	Intergenic	novelGene_7133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	9071963	9072144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9072000_9072100
ES.8663.1	chr13	+	177	1	Intergenic	novelGene_7134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCAGATGTA	9572	False	NA	NA	False	NA	NA	NA	9103536	9103713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9103500_9103700
ES.8664.1	chr13	+	156	1	Intergenic	novelGene_7135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGCTCAAAAGCACACCA	NA	False	NA	NA	False	NA	NA	NA	9104410	9104566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9104400_9104600
ES.8665.1	chr13	-	111	1	Intergenic	novelGene_7136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACTGGGCTCAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	9104716	9104605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9104600_9104700
ES.8666.1	chr13	+	5977	18	NNC	ENSMUSG00000033499.15	novel	4666	2	NA	NA	-248	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.1662125739557	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143668	9224487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9143873_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.10	chr13	+	6417	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-29	867	-29	0	intron_retention	FALSE	canonical	0	0	junction_12	76.9374492282529	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9143887	9223157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933
ES.8666.100	chr13	+	3950	3	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	73551	867	-929	0	3prime_fragment	FALSE	canonical	3	270	junction_2	22	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9217467	9223157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9218839_9218933_9219043_9220687
ES.8666.11	chr13	+	5544	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-7	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.6898546956926	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143909	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208681_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.12	chr13	+	6014	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-6	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.7153118962209	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTTGATTCTTT	NA	False	NA	17	True	AATAAA	-17	NA	9143910	9224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219025_9220687
ES.8666.13	chr13	+	5828	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-101	-7	0	7	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTTTTTTGTTTCCTT	NA	False	NA	18	True	ATTAAA	-26	NA	9143916	9224494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.14	chr13	+	7030	17	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	1	-33	intron_retention	FALSE	canonical	0	0	junction_11	76.3257564243552	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143917	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.15	chr13	+	5379	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-100	441	1	22	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143917	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.16	chr13	+	6084	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	97.8281099702229	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTTAAAGATTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	9143918	9224485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218918_9219043_9220687
ES.8666.17	chr13	+	4556	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	9	-33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	96.9958793830127	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143925	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9221544_9221688
ES.8666.19	chr13	+	4838	19	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	12	-33	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	113.176361882192	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143928	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9168001_9168142_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.2	chr13	+	5465	18	NNC	ENSMUSG00000033499.15	novel	4666	2	NA	NA	-177	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.1662125739557	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143739	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9143873_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.20	chr13	+	5181	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	12	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	96.9958793830127	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTCTTTTGATTCTT	NA	False	NA	16	True	AATAAA	-16	NA	9143928	9224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208267_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223154_9223986
ES.8666.22	chr13	+	6110	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-8	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	113.439656009508	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTTGATTCTTT	NA	False	NA	17	True	AATAAA	-17	NA	9143934	9224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9204504_9204607_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.24	chr13	+	5568	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-7	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	97.8281099702229	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143935	9223986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218918_9219043_9220687
ES.8666.25	chr13	+	5576	15	NIC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	-7	-47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	105.895982849556	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTTGATTCTTT	NA	False	NA	17	True	AATAAA	-17	NA	9143935	9224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.27	chr13	+	5239	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	96.9958793830127	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143935	9224487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223172_9223986
ES.8666.28	chr13	+	4605	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-6	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.4892145221198	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143936	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.3	chr13	+	4572	18	NNC	ENSMUSG00000033499.15	novel	4666	2	NA	NA	-173	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.1662125739557	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9143743	9223157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9143873_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.30	chr13	+	5913	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-2	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.6898546956926	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9143940	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208270_9208681_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.33	chr13	+	5970	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-2	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.4892145221198	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGATTTTTTTGTTTCCT	NA	False	NA	17	True	ATTAAA	-25	NA	9143940	9224493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.37	chr13	+	5886	17	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	-48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.69004865979	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTCTTTTGATTCTT	NA	False	NA	16	True	AATAAA	-16	NA	9143941	9224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144222_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.38	chr13	+	4602	18	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	116.42895869218	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9143941	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9168001_9168142_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.39	chr13	+	7648	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	25	-418	-1	-45	intron_retention	FALSE	canonical	0	0	junction_12	76.9374492282529	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9143941	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933
ES.8666.4	chr13	+	4224	17	NNC	ENSMUSG00000033499.15	novel	4666	2	NA	NA	-110	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	102.212840894625	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143806	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9143873_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.41	chr13	+	5819	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	-49	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.4892145221198	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTTTCTTTTGATTCT	NA	False	NA	15	True	AATAAA	-15	NA	9143941	9224438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208681_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.43	chr13	+	5157	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	96.9958793830127	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9143941	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223141_9223986
ES.8666.44	chr13	+	4700	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.7153118962209	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9143941	9223157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219025_9220687
ES.8666.45	chr13	+	3830	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	25	1755	-1	-888	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGACTTGAATTTT	NA	False	NA	NA	False	NA	NA	NA	9143941	9222269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.46	chr13	+	5589	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-1	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	98.7153118962209	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143941	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219025_9220687
ES.8666.48	chr13	+	4521	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.799244853638	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143942	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9212627_9212717_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.49	chr13	+	6901	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	99.6449405983626	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9143942	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219942_9220687
ES.8666.5	chr13	+	4397	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-72	1285	-72	-418	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGGTGTGTTGAACTG	NA	False	NA	NA	False	NA	NA	NA	9143844	9222739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.50	chr13	+	5034	17	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	260	junction_12	26.2320623236146	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9143942	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.51	chr13	+	4949	18	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	99.799244853638	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTTTTAAAGATTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	9143942	9224484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223144_9223986
ES.8666.54	chr13	+	4514	17	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	120.573742347785	562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9143942	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144222_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.59	chr13	+	5939	17	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	1	-47	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	102.409544690668	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTTTTGATTCTTT	NA	False	NA	17	True	AATAAA	-17	NA	9143943	9224440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9172143_9172263_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.6	chr13	+	4565	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-161	1316	-60	14	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCCTCTTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	9143856	9223171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.60	chr13	+	4529	16	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	1	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	102.307032450799	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	9143943	9223149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.61	chr13	+	3649	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	27	1934	1	758	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTTAAAACGCCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	9143943	9222090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.62	chr13	+	4620	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	74.6898546956926	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9143944	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208270_9208681_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.63	chr13	+	5861	16	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	102.307032450799	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTTAAAGATTTTTT	NA	False	NA	9	True	ATTAAA	-17	NA	9143947	9224485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9144217_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.64	chr13	+	7522	17	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	1	-1	intron_retention	FALSE	canonical	0	0	junction_12	102.864424577937	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAAAGATTTTTTT	NA	False	NA	10	True	ATTAAA	-18	NA	9143948	9224486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9212627_9212717_9214710_9214757_9216352_9216518_9218713_9218839_9218933
ES.8666.65	chr13	+	4128	17	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	1	-469	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.69004865979	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGTTTGAGTATTAT	NA	False	NA	NA	False	TATAAA	-33	NA	9143948	9222688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144222_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.66	chr13	+	4505	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	32	1073	1	-206	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCTGTTAAGTGATTT	NA	False	NA	NA	False	ATTAAA	-3	NA	9143948	9222951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.67	chr13	+	5944	17	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	1	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	101.911726508778	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGCATTTTTTTAAAGA	NA	False	NA	3	True	ATTAAA	-11	NA	9143948	9224479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197563_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.68	chr13	+	4040	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	-69	1749	1	-419	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTGGTGTGTTGAACT	NA	False	NA	NA	False	NA	NA	NA	9143948	9222738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.69	chr13	+	6489	19	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	3	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	113.821606141766	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTATATTGCTGTATTA	NA	False	NA	NA	False	NA	NA	NA	9143950	9224045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9180268_9181161_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.7	chr13	+	6133	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-60	-463	-60	0	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143856	9224487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.70	chr13	+	5652	17	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	5	-48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	102.542654996592	574	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTCTTTTGATTCTT	NA	False	NA	16	True	AATAAA	-16	NA	9143952	9224439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.74	chr13	+	5255	17	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	9	22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	102.542654996592	570	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143956	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220772
ES.8666.76	chr13	+	4676	18	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	15	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	99.2633071796882	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTGACAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143962	9223118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216334_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.79	chr13	+	5646	17	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	79	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	100.836172050262	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGCATTTTTTTAAA	NA	False	NA	1	True	ATTAAA	-9	NA	9144096	9224477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218918_9219043_9220687
ES.8666.8	chr13	+	5688	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-56	-22	-56	22	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATATTGCTGTATTAG	NA	False	NA	NA	False	NA	NA	NA	9143860	9224046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.80	chr13	+	175	1	Intergenic	novelGene_7138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	9159985	9160160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9160000_9160200
ES.8666.81	chr13	+	4322	17	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-14110	-33	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	76.960115481982	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	811	False	NA	NA	False	NA	NA	NA	9172140	9223124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208270_9208681_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.82	chr13	+	5767	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	28224	-454	-14110	-9	3prime_fragment	FALSE	canonical	0	0	junction_11	76.960115481982	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGCATTTTTTTAAAG	811	False	NA	2	True	ATTAAA	-10	NA	9172140	9224478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.83	chr13	+	4440	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	28226	871	-14108	-4	3prime_fragment	FALSE	canonical	0	0	junction_11	76.960115481982	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	813	False	NA	NA	False	NA	NA	NA	9172142	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.84	chr13	+	5477	16	ISM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	28125	45	-14108	-45	3prime_fragment	FALSE	canonical	0	0	junction_11	79.2981434559193	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	813	False	NA	19	True	AATAAA	-19	NA	9172142	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.85	chr13	+	2471	17	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	28226	2840	-14108	-148	3prime_fragment	FALSE	canonical	0	0	junction_11	76.960115481982	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGGTTGGTGCTTA	813	False	NA	NA	False	TATAAA	-3	NA	9172142	9221184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.86	chr13	+	5264	1	Intergenic	novelGene_7139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAGAAGAAGAAGAAAGA	4573	False	NA	NA	False	NA	NA	NA	9180006	9185270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9180000_9185300
ES.8666.87	chr13	+	4010	14	ISM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	42795	1334	342	-4	3prime_fragment	FALSE	canonical	0	0	junction_9	84.8994532359503	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9186812	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.88	chr13	+	5177	12	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	51499	-418	8945	-45	3prime_fragment	FALSE	canonical	0	0	junction_6	90.4122788413679	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9195415	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.89	chr13	+	5055	13	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	8969	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	114.420156538183	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9195439	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223353_9223450
ES.8666.9	chr13	+	4810	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	-53	853	-53	14	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCCTCTTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	9143863	9223171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.90	chr13	+	4854	10	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	13401	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.375560377789	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTTTTTAAAGATTTT	NA	False	NA	7	True	ATTAAA	-15	NA	9199871	9224483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208728_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.91	chr13	+	4422	10	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	13482	-35	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	121.814065963938	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9199952	9223122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219942_9220687
ES.8666.92	chr13	+	3451	8	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	57132	902	14578	-35	3prime_fragment	FALSE	canonical	0	0	junction_2	103.166795797398	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9201048	9223122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.93	chr13	+	3205	7	NNC	ENSMUSG00000033499.15	novel	5720	17	NA	NA	14622	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	135.60072107314	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9201092	9223157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218918_9219043_9220687
ES.8666.94	chr13	+	4025	6	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	64668	11	-9812	-11	3prime_fragment	FALSE	canonical	3	260	junction_1	22.0272558436134	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9208584	9224013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.95	chr13	+	3507	7	NNC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	-9723	-45	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	107.733725246812	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTTGATTCTTTTA	NA	False	NA	19	True	AATAAA	-19	NA	9208673	9224442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687_9223141_9223998
ES.8666.97	chr13	+	5750	5	ISM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	67955	871	-6525	-4	3prime_fragment	FALSE	canonical	3	269	junction_2	20.6518764280634	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	9211871	9223153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ES.8666.98	chr13	+	9373	2	FSM	ENSMUSG00000033499.15	ENSMUST00000189330.2	4666	2	-4715	8	-4715	-8	multi-exon	FALSE	canonical	3	314	junction_1	0	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	9213681	9223149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9218839_9218933
ES.8666.99	chr13	+	6752	2	FSM	ENSMUSG00000033499.15	ENSMUST00000189330.2	4666	2	-1222	-864	-1222	-3	multi-exon	FALSE	canonical	3	314	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GACAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	9217174	9224021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_9218839_9218933
ES.8667.1	chr13	-	1055	1	Intergenic	novelGene_7137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTGTATACACACAC	NA	False	NA	NA	False	ATTAAA	-15	NA	9154079	9153024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9153000_9154100
ES.8668.1	chr13	+	5196	1	Intergenic	novelGene_7140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	9227750	9232946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9227800_9232900
ES.8669.1	chr13	+	183	1	Intergenic	novelGene_7141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	9303897	9304080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9303900_9304100
ES.867.1	chr1	-	4739	5	NNC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	3857	2069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.2613602842582	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTTTACTGAAGTAAA	NA	False	NA	NA	False	AAAAAG	-32	NA	84310037	84011947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84016229_84136952_84137100_84287533_84287600_84289369_84289407_84309829
ES.867.10	chr1	-	1550	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	23	1091	1	-156	multi-exon	FALSE	canonical	3	48	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTCACTTCTTCTA	463	False	NA	NA	False	AATATA	-17	NA	84262343	84015107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84016229_84136952_84137100_84262061
ES.867.11	chr1	-	668	3	FSM	ENSMUSG00000045658.17	ENSMUST00000176720.2	450	3	-241	23	-19	-23	multi-exon	FALSE	canonical	3	16	junction_1	16	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAATTGGAACAGC	421	False	NA	NA	False	NA	NA	NA	84262385	84058322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84058520_84136952_84137100_84262061
ES.867.12	chr1	-	1495	1	FSM	ENSMUSG00000045658.17	ENSMUST00000187992.2	1431	1	-33	-31	-11	31	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCCCAGTGGTCTCCA	429	False	NA	NA	False	NA	NA	NA	84262377	84260882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84260900_84262400
ES.867.13	chr1	-	1339	5	NNC	ENSMUSG00000045658.17	novel	1119	5	NA	NA	26	-22238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.26917420765551	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGTGAATGGAATAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	84318805	84283151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84284225_84287533_84287600_84289369_84289407_84317454_84317589_84318776
ES.867.14	chr1	-	366	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	-6	True	NA	NA	NA	84310323	84309957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84310000_84310300
ES.867.2	chr1	-	4795	4	NIC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	0	2069	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	22.3954360429878	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTTTACTGAAGTAAA	462	False	NA	NA	False	AAAAAG	-32	NA	84262344	84011947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84016229_84136952_84137100_84169060_84169145_84262061
ES.867.3	chr1	-	4674	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	22	-2032	0	2032	multi-exon	FALSE	canonical	3	48	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	462	False	NA	NA	False	NA	NA	NA	84262344	84011984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84016229_84136952_84137100_84262061
ES.867.4	chr1	-	11216	1	Genic_Genomic	ENSMUSG00000045658.17	novel	NA	NA	NA	NA	7774	2032	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84023200	84011984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_84012000_84023200
ES.867.5	chr1	-	2994	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	24	-354	2	354	multi-exon	FALSE	canonical	3	48	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTCCTTCACGGAATC	464	False	NA	NA	False	AATAAA	-21	NA	84262342	84013662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84016229_84136952_84137100_84262061
ES.867.6	chr1	-	2866	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	-206	4	-206	-4	multi-exon	FALSE	canonical	3	48	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCAATTTTATTTATTT	-9	True	NA	NA	False	AATAAA	-15	NA	84262572	84014020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84016229_84136952_84137100_84262061
ES.867.7	chr1	-	2576	5	NNC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	3857	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.2613602842582	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCCAGGGCGTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	84310037	84014110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84016229_84136952_84137100_84287533_84287600_84289369_84289407_84309829
ES.867.8	chr1	-	2655	4	NNC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	35	-94	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.9555060627944	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCCAGGGCGTTTCA	509	False	NA	NA	False	AATAAA	-15	NA	84262297	84014110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84016229_84058365_84058520_84136952_84137100_84262061
ES.867.9	chr1	-	2668	4	NNC	ENSMUSG00000045658.17	novel	2664	3	NA	NA	-2	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6274169979695	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAAGCCAGGGCGTTTC	472	False	NA	NA	False	AATAAA	-14	NA	84262334	84014111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84016229_84136952_84137100_84153154_84153286_84262061
ES.8670.1	chr13	-	185	1	Intergenic	novelGene_7142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTATTTTCAATTAAAATA	NA	False	NA	NA	False	TTTAAA	-40	NA	9322872	9322687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9322700_9322900
ES.8671.1	chr13	-	2876	1	Intergenic	novelGene_7143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGCTGTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	9341126	9338250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9338200_9341100
ES.8672.1	chr13	+	5138	37	Fusion	ENSMUSG00000113905.2_ENSMUSG00000048264.17	novel	2813	16	NA	NA	33980	257	multi-exon	TRUE	canonical	0	0	junction_1	11.2194716101016	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAGTGTGACAAGGA	NA	False	NA	NA	False	ATTAAA	-40	NA	9360997	9716471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_9361145_9543140_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.10	chr13	+	4238	18	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	329907	951	-4371	-951	3prime_fragment	FALSE	canonical	3	44	junction_4	7.04557580388605	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGCTCATTGCTAT	NA	False	NA	NA	False	CATAAA	-18	NA	9656470	9718013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.11	chr13	+	4825	3	NNC	ENSMUSG00000048264.17	novel	2813	16	NA	NA	-3814	-50854	intron_retention	TRUE	non_canonical	0	0	junction_1	25	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGATTAGATTCCTGCCC	NA	False	NA	NA	False	AATAGA	-29	NA	9657027	9665360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_9657504_9657563_9660935_9664382
ES.8672.12	chr13	+	5096	17	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	332412	0	-1866	0	3prime_fragment	FALSE	canonical	3	44	junction_3	7.11512473537885	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9658975	9718964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.13	chr13	+	1386	3	ISM	ENSMUSG00000048264.17	ENSMUST00000222280.2	2813	16	48437	-1	48437	1	3prime_fragment	FALSE	canonical	3	64	junction_1	3	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGTGTTGTATTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	9709278	9716898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9709456_9712172_9712297_9715813
ES.8672.2	chr13	+	7800	38	Fusion	ENSMUSG00000113905.2_ENSMUSG00000048264.17	novel	2813	16	NA	NA	36500	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7321768408689	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9363517	9718964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_9363666_9543140_9543213_9544869_9545038_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.3	chr13	+	7711	38	Fusion	ENSMUSG00000113905.2_ENSMUSG00000048264.17	novel	2813	16	NA	NA	36521	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9242445859728	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9363538	9718964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_9363666_9367530_9367631_9543140_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.4	chr13	+	790	1	Intergenic	novelGene_7146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATACAGGTAAGAAACTT	4530	False	NA	NA	False	NA	NA	NA	9423430	9424220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9423400_9424200
ES.8672.5	chr13	+	4958	33	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	260287	2058	-73991	9	3prime_fragment	FALSE	canonical	3	44	junction_4	6.30847644047277	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTATCTTGCGTG	NA	False	NA	NA	False	ATTAAA	-30	NA	9586850	9716906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.6	chr13	+	7322	33	Fusion	ENSMUSG00000113905.2_ENSMUSG00000048264.17	novel	2813	16	NA	NA	-9914	-4	multi-exon	FALSE	canonical	0	0	junction_1	13.6690443498256	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCAGTTTCTTAATT	NA	False	NA	22	True	AATAAA	-23	NA	9597982	9718960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_9598332_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664505_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.7	chr13	+	6525	29	NIC	ENSMUSG00000048264.17	novel	8023	37	NA	NA	-50136	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	10.5067398194042	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	9019	False	NA	26	True	AATAAA	-27	NA	9610705	9718964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664505_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.8	chr13	+	6421	28	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	286585	0	-47693	0	3prime_fragment	FALSE	canonical	3	44	junction_14	6.35592677841871	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9613148	9718964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8672.9	chr13	+	5576	20	ISM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	324827	4	-9451	-4	3prime_fragment	FALSE	canonical	3	44	junction_6	6.86716060223162	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCAGTTTCTTAATT	NA	False	NA	22	True	AATAAA	-23	NA	9651390	9718960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ES.8673.1	chr13	-	211	1	Intergenic	novelGene_7144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAACAAACAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	9403622	9403411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9403400_9403600
ES.8674.1	chr13	-	1654	1	Intergenic	novelGene_7145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9416881	9415227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9415200_9416900
ES.8675.1	chr13	-	179	1	Intergenic	novelGene_7147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATAGC	NA	False	NA	NA	False	NA	NA	NA	9454568	9454389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9454400_9454600
ES.8675.2	chr13	-	4173	1	Intergenic	novelGene_7148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGTGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	9458741	9454568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_9454600_9458700
ES.8676.1	chr13	-	4657	4	Antisense	novelGene_ENSMUSG00000048264.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	9489917	9482750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_9486114_9488484_9489169_9489228_9489325_9489403
ES.8677.1	chr13	-	1738	1	Antisense	novelGene_ENSMUSG00000113905.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9607990	9606252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_9606300_9608000
ES.8678.1	chr13	-	1348	1	Antisense	novelGene_ENSMUSG00000048264.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAGCAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	9614092	9612744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_9612700_9614100
ES.8679.1	chr13	+	3028	14	Genic_Genomic	ENSMUSG00000114138.2	novel	1298	2	NA	NA	1601	75839	multi-exon	FALSE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAAAGACACCCGAGTT	NA	False	NA	NA	False	NA	NA	NA	9735929	9815419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_9737021_9739098_9739285_9739487_9739766_9740316_9740553_9740940_9741149_9743467_9743585_9744304_9744383_9745164_9745223_9745776_9745865_9747681_9747772_9748662_9748742_9770808_9770969_9785366_9785505_9815198
ES.8679.2	chr13	+	174	1	Intergenic	novelGene_7149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAT	NA	False	NA	NA	False	NA	NA	NA	9797826	9798000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9797800_9798000
ES.8679.3	chr13	+	3940	1	Intergenic	novelGene_7150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGCCACACACCACAAAC	NA	False	NA	NA	False	NA	NA	NA	9798742	9802682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_9798700_9802700
ES.868.1	chr1	+	218	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACAGGTACTTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	84695538	84695756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84695500_84695800
ES.8680.1	chr13	-	3794	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	-24	0	-3	0	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814483	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.10	chr13	-	4007	16	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	49.1856347592126	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814489	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9814381
ES.8680.12	chr13	-	3680	14	NNC	ENSMUSG00000021156.18	novel	3770	14	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.5105718537445	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815000	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739736_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.13	chr13	-	4066	16	NNC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	53.3714863532538	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815214	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9758858_9758947_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.14	chr13	-	4165	16	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	53.6550297942534	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814479	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9814381
ES.8680.15	chr13	-	4301	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	40.2020407645265	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815042	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.16	chr13	-	4290	15	NNC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.9395215684175	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814178	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9813742
ES.8680.17	chr13	-	3739	14	NIC	ENSMUSG00000021156.18	novel	3770	14	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	44.0067235314825	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814426	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9785367_9785503_9814381
ES.8680.18	chr13	-	4061	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	39.9073544447074	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815403	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815196
ES.8680.19	chr13	-	3776	14	NNC	ENSMUSG00000021156.18	novel	3770	14	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	46.4882755467829	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814444	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745242_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.2	chr13	-	3983	15	NNC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	355	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	41.9395215684175	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814031	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9813902
ES.8680.20	chr13	-	4023	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	-20	0	-20	0	multi-exon	FALSE	canonical	3	27	junction_3	41.8502543239853	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814544	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.21	chr13	-	4030	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	49.3708344059611	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815366	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815196
ES.8680.22	chr13	-	4130	15	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	39.4736414249679	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814489	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.23	chr13	-	3816	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	-18	-2	-18	0	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815214	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
ES.8680.24	chr13	-	7131	12	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-18	0	intron_retention	FALSE	canonical	3	34	junction_11	35.4820406207362	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815214	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.25	chr13	-	5035	9	ISM	ENSMUSG00000021156.18	ENSMUST00000222475.2	1551	12	37814	-2031	-1496	0	3prime_fragment	FALSE	canonical	3	110	junction_3	15.0991514662248	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	6494	False	NA	-1	True	AATAAA	-19	NA	9747671	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774
ES.8680.26	chr13	-	5812	15	NNC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-6	-1	intron_retention	FALSE	canonical	0	0	junction_10	66.1081365210495	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	-2	True	AATAAA	-18	NA	9815202	9734872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9747773_9748663_9748742_9758858_9758947_9760317_9760344_9763018_9763064_9770808_9770969_9815090
ES.8680.27	chr13	-	4194	15	NNC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.6385752773757	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTTGTCAGTAAGCT	NA	False	NA	-2	True	AATAAA	-18	NA	9814928	9734872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739479_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.28	chr13	-	7902	3	NIC	ENSMUSG00000021156.18	novel	3796	14	NA	NA	-237	0	intron_retention	FALSE	canonical	3	110	junction_2	15.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	8591	False	NA	-3	True	AATAAA	-17	NA	9745574	9734873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739761_9740481
ES.8680.29	chr13	-	4514	14	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	65	junction_13	31.1556504700675	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9814489	9734873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.3	chr13	-	3985	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	129	3	22	0	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815221	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.30	chr13	-	4161	16	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	55.7974909830182	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9815186	9734873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9815090
ES.8680.31	chr13	-	4042	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	42.6016362160425	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9814947	9734873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.32	chr13	-	3982	14	NIC	ENSMUSG00000021156.18	novel	3796	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	45.6649749899023	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9815214	9734873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
ES.8680.34	chr13	-	7533	5	ISM	ENSMUSG00000021156.18	ENSMUST00000222475.2	1551	12	39688	-2028	378	-1	intron_retention	FALSE	canonical	3	110	junction_3	12.5896783120142	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACTCTTGTCAGTAAG	8368	False	NA	-4	True	AATAAA	-16	NA	9745797	9734874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938
ES.8680.36	chr13	-	4128	16	NNC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	51.3963249875146	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACAACTCTTGTCAGTA	NA	False	NA	-6	True	AATAAA	-14	NA	9814954	9734876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9758858_9758947_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.37	chr13	-	4090	16	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	8	-6	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	49.6677852223037	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814965	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9814763
ES.8680.38	chr13	-	8121	11	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	27	junction_3	42.0001190474503	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815000	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.4	chr13	-	3976	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	49.847222210773	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814413	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.40	chr13	-	5241	4	NIC	ENSMUSG00000021156.18	novel	1857	13	NA	NA	-1833	-6	intron_retention	FALSE	canonical	3	27	junction_2	51.5450180802072	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9743142	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739761_9740313_9740551_9740938
ES.8680.41	chr13	-	7342	12	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-8	-6	intron_retention	FALSE	canonical	3	10	junction_11	47.7571335158727	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815374	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815196
ES.8680.42	chr13	-	4158	16	NNC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	55.7430613519646	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814435	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9742669_9742763_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.43	chr13	-	4661	16	NNC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	57.7078465683442	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815205	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9749257_9749793_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.45	chr13	-	3729	13	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	27	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	45.1931041937447	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814946	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9814763
ES.8680.46	chr13	-	4675	13	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	3	-6	intron_retention	FALSE	canonical	3	27	junction_3	43.5037514346624	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814487	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.47	chr13	-	4840	4	NIC	ENSMUSG00000021156.18	novel	1551	12	NA	NA	-1600	-6	intron_retention	FALSE	canonical	3	110	junction_2	12.9185482500507	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9742909	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739761_9740481_9740551_9740938
ES.8680.49	chr13	-	4109	13	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	16	-6	intron_retention	FALSE	canonical	3	27	junction_2	43.5126897199733	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9814438	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.5	chr13	-	4123	14	NIC	ENSMUSG00000021156.18	novel	3770	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_13	33.3849698669589	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815194	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.50	chr13	-	3774	14	NIC	ENSMUSG00000021156.18	novel	3796	14	NA	NA	17	-6	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	42.2407862576993	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815289	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815196
ES.8680.51	chr13	-	3654	13	NIC	ENSMUSG00000021156.18	novel	3796	14	NA	NA	-2	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	44.7536466546458	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9815198	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9815090
ES.8680.52	chr13	-	2446	1	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	3218	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	False	NA	-12	True	AATAAA	-8	NA	9737328	9734882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9734900_9737300
ES.8680.53	chr13	-	6224	13	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	16	-7	intron_retention	FALSE	canonical	3	27	junction_3	43.5573536335204	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACCCAACAACTCTT	NA	False	NA	-13	True	AATAAA	-7	NA	9814438	9734883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.54	chr13	-	3058	6	NNC	ENSMUSG00000021156.18	novel	1857	13	NA	NA	1829	-12	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	58.0916517238062	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATTTAAAAAACCCAACAA	NA	False	NA	-18	True	AATAAA	-2	NA	9743508	9734888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739508_9739761_9740313_9740551_9740938_9741147_9743465
ES.8680.55	chr13	-	3806	16	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-1	92	combination_of_known_junctions	FALSE	canonical	2	6	junction_12	49.1856347592126	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTATCAAGGTGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	9814455	9735038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9814381
ES.8680.56	chr13	-	3836	15	NNC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-19	92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	44.1181160439258	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCTATCAAGGTGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	9814928	9735038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760197_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.57	chr13	-	3883	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	-50	-9	-50	9	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTGTGGCCTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	9815042	9735121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.58	chr13	-	3730	14	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	-6	-23	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	42.6016362160425	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9814915	9735153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.59	chr13	-	3035	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	143	939	-11	521	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCACCAATTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	9815207	9735807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.6	chr13	-	4290	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	43.1802108869896	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815358	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.60	chr13	-	3156	14	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-8	516	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	42.6016362160425	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCTCACCAATTGT	NA	False	NA	NA	False	ATTAAA	-8	NA	9815000	9735812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.61	chr13	-	3085	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	-19	395	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	43.1802108869896	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCGTATTCTGCGGGG	NA	False	NA	NA	False	ATTAAA	-18	NA	9815215	9735933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ES.8680.62	chr13	-	2281	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	11	223	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	39.4736414249679	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCAAATTTTAAAACATT	NA	False	NA	NA	False	AATAAA	-25	NA	9814443	9736674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.63	chr13	-	2155	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	4	222	combination_of_known_junctions	FALSE	canonical	3	65	junction_14	30.2476175482787	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCAAATTTTAAAACAT	NA	False	NA	NA	False	AATAAA	-24	NA	9814486	9736675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.64	chr13	-	2120	14	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-6	219	combination_of_known_junctions	FALSE	canonical	3	58	junction_13	33.3849698669589	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTCAGCAAATTTTAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	9814998	9736678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.65	chr13	-	1967	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	15	1814	15	210	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGCATTTTCAGCAA	NA	False	NA	NA	False	AATAAA	-12	NA	9815181	9736687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
ES.8680.66	chr13	-	2484	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	-50	209	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	40.2020407645265	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTGCATTTTCAGCA	NA	False	NA	NA	False	AATAAA	-11	NA	9815042	9736688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.67	chr13	-	2277	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	-92	1818	-92	208	multi-exon	FALSE	canonical	3	27	junction_3	41.8502543239853	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGTTGCATTTTCAGC	NA	False	NA	NA	False	AATAAA	-10	NA	9814616	9736689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.68	chr13	-	1825	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	23	1922	18	104	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGCACAGTAGTTTA	NA	False	NA	NA	False	TTTAAA	-15	NA	9814436	9736793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.69	chr13	-	2646	12	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	13	101	intron_retention	FALSE	canonical	1	2	junction_11	52.643507130274	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTTTGCACAGTAGT	NA	False	NA	NA	False	TTTAAA	-12	NA	9815183	9736796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739761_9740313_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9815090
ES.8680.7	chr13	-	3974	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_14	30.2476175482787	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814501	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ES.8680.70	chr13	-	1120	10	NIC	ENSMUSG00000021156.18	novel	987	10	NA	NA	-19	118	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	64.6752571613665	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTCATGTGATCTTA	NA	False	NA	NA	False	AATATA	-13	NA	9815215	9744204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9763018_9763064_9770808_9770969_9785367_9785503_9815090
ES.8680.71	chr13	-	1317	6	NIC	ENSMUSG00000021156.18	novel	867	8	NA	NA	1	49	intron_retention	FALSE	canonical	3	61	junction_3	47.9357903867246	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTCAGGCCTCTGTCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	9814489	9745119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.72	chr13	-	718	6	ISM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	-24	10841	-3	-539	5prime_fragment	FALSE	canonical	3	61	junction_3	47.9357903867246	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTCTTTGTAATTCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	9814483	9745712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.73	chr13	-	2507	5	NIC	ENSMUSG00000021156.18	novel	867	8	NA	NA	-1	-539	intron_retention	FALSE	canonical	3	61	junction_2	49.0580013861144	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTCTTTGTAATTCAT	NA	False	NA	-2	True	ATTAAA	-20	NA	9814455	9745712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.74	chr13	-	991	7	ISM	ENSMUSG00000021156.18	ENSMUST00000223421.2	1582	13	-69	6147	-5	-541	5prime_fragment	FALSE	canonical	3	58	junction_6	43.4626276242015	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAGTTCTTTGTAATTC	NA	False	NA	-4	True	ATTAAA	-18	NA	9814978	9745714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.75	chr13	-	734	6	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	13	-541	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	60.5124780520514	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAGTTCTTTGTAATTC	NA	False	NA	-4	True	ATTAAA	-18	NA	9815183	9745714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9815090
ES.8680.76	chr13	-	796	6	NIC	ENSMUSG00000021156.18	novel	1582	13	NA	NA	27	-542	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	49.6346653056108	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAGTTCTTTGTAATT	NA	False	NA	-5	True	ATTAAA	-17	NA	9814946	9745715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8680.77	chr13	-	3410	4	NIC	ENSMUSG00000021156.18	novel	867	8	NA	NA	10	-542	intron_retention	FALSE	canonical	3	61	junction_1	42.4578222082418	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAGTTCTTTGTAATT	NA	False	NA	-5	True	ATTAAA	-17	NA	9814470	9745715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_9748742_9770808_9770969_9785367_9785503_9814381
ES.8680.8	chr13	-	4208	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	-125	-259	79	0	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815117	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ES.8680.9	chr13	-	3758	14	NNC	ENSMUSG00000021156.18	novel	3770	14	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	47.130688252432	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814850	9734871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_9737021_9739098_9739285_9739508_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814763
ES.8681.1	chr13	-	203	1	FSM	ENSMUSG00002075551.1	ENSMUST00020182858.1	57	1	48	-194	48	194	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATTAGGGAAACA	NA	False	NA	NA	False	NA	NA	NA	9884513	9884310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_9884300_9884500
ES.8682.1	chr13	+	3243	1	Antisense	novelGene_ENSMUSG00000046159.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTATATTTATTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	9928088	9931331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_9928100_9931300
ES.8683.1	chr13	-	5560	1	Genic_Genomic	ENSMUSG00000113261.2	novel	NA	NA	NA	NA	427	963	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATAAGTTCTGTGACT	NA	False	NA	NA	False	NA	NA	NA	10230416	10224856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_10224900_10230400
ES.8684.1	chr13	+	89	1	Intergenic	novelGene_7151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10928249	10928338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_10928200_10928300
ES.8685.1	chr13	-	156	1	Intergenic	novelGene_7152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11311396	11311240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_11311200_11311400
ES.8686.1	chr13	+	128	1	Intergenic	novelGene_7153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAACAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11477494	11477622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_11477500_11477600
ES.8687.1	chr13	+	179	1	Intergenic	novelGene_7154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTTTTACTT	NA	False	NA	NA	False	NA	NA	NA	11510543	11510722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_11510500_11510700
ES.8688.1	chr13	+	173	1	Intergenic	novelGene_7155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11807303	11807476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_11807300_11807500
ES.8689.1	chr13	+	2792	1	Intergenic	novelGene_7156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	5391	False	NA	NA	False	NA	NA	NA	11845658	11848450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_11845700_11848400
ES.869.1	chr1	+	5576	5	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACTTAACCGAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84706572	84719760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84708416_84709341_84709501_84709735_84709847_84714700_84714802_84716398
ES.869.2	chr1	+	3878	1	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACTTAACCGAAAAATAAA	5514	False	NA	NA	False	NA	NA	NA	84715882	84719760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84715900_84719800
ES.8690.1	chr13	+	303	1	Intergenic	novelGene_7157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12119104	12119407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12119100_12119400
ES.8691.1	chr13	-	3831	18	ISM	ENSMUSG00000021313.17	ENSMUST00000220597.2	4924	25	237766	2	-39525	-2	3prime_fragment	FALSE	canonical	0	0	junction_6	1.39201877249403	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATTTGGAAGGCC	8750	False	NA	NA	False	TATAAA	-17	NA	11884065	11785927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_11787466_11794070_11794155_11799923_11800028_11805144_11805250_11807554_11807772_11809427_11809621_11814567_11814810_11816023_11816158_11816692_11816812_11825768_11825865_11839159_11839296_11842419_11842604_11844442_11844565_11848809_11848975_11865943_11866101_11868001_11868077_11883002_11883100_11884002
ES.8691.2	chr13	-	3496	21	NNC	ENSMUSG00000021313.17	novel	4924	25	NA	NA	68	-18840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.49248115565993	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGTATTCTCTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	12121763	11804765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_11805250_11807554_11807772_11809427_11809621_11814567_11814810_11816023_11816158_11816692_11816812_11825768_11825865_11839159_11839296_11842419_11842604_11844442_11844565_11848809_11848975_11865943_11866101_11868001_11868077_11883002_11883100_11884002_11884103_11894360_11894474_11897930_11898010_11900349_11900425_11933192_11933302_11960768_11960889_12121284
ES.8692.1	chr13	-	3838	1	Intergenic	novelGene_7158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAGAAATGAGCTGAGT	8464	False	NA	NA	False	NA	NA	NA	12192026	12188188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_12188200_12192000
ES.8693.1	chr13	+	1671	1	Intergenic	novelGene_7159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCTCAAAATAATCAACCT	NA	False	NA	NA	False	AATAAA	-44	NA	12195243	12196914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12195200_12196900
ES.8694.1	chr13	-	1025	1	Intergenic	novelGene_7160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGTGTAGAGACTCAT	2926	False	NA	NA	False	AATAAA	-15	NA	12197564	12196539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_12196500_12197600
ES.8695.1	chr13	+	173	1	Intergenic	novelGene_7161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTGGAGCATG	NA	False	NA	NA	False	NA	NA	NA	12221845	12222018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12221800_12222000
ES.8696.1	chr13	+	2812	2	Antisense	novelGene_ENSMUSG00000021311.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGACAGAAGGATTGCT	NA	False	NA	NA	False	NA	NA	NA	12245345	12249973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_12245971_12247786
ES.8696.2	chr13	+	4628	1	Antisense	novelGene_ENSMUSG00000021311.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGACAGAAGGATTGCT	NA	False	NA	NA	False	NA	NA	NA	12245345	12249973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_12245300_12250000
ES.8696.3	chr13	+	2251	2	Antisense	novelGene_ENSMUSG00000021311.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACAGTATGAG	NA	False	NA	NA	False	AAGAAA	-38	NA	12245345	12249412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_12245971_12247786
ES.8697.1	chr13	+	175	1	Intergenic	novelGene_7162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATATCTAGCTTCT	NA	False	NA	NA	False	NA	NA	NA	12250981	12251156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12251000_12251200
ES.8698.1	chr13	-	8335	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	35.1814493021535	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	5914	False	NA	0	True	AATAAA	-26	NA	12273028	12197597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231780_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.10	chr13	-	8350	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-55	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	34.206119244223	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAATCTGGTATGATG	5888	False	NA	-8	True	AATAAA	-18	NA	12273054	12197605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214022_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.11	chr13	-	8340	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-58	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	46.5429908794009	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAATCTGGTATGATG	5885	False	NA	-8	True	AATAAA	-18	NA	12273057	12197605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210127_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219732_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.13	chr13	-	7387	34	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-48	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.0725340491402	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAATCTGGTATGATG	5895	False	NA	-8	True	AATAAA	-18	NA	12273047	12197605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12200001_12200965_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.16	chr13	-	4757	4	NNC	ENSMUSG00000021311.10	novel	1784	8	NA	NA	10197	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.7036335045939	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAAATCTGGTATGAT	NA	False	NA	-9	True	AATAAA	-17	NA	12205176	12197606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203033_12204232_12204426_12205089
ES.8698.18	chr13	-	5782	17	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-21074	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.0451227296767	316	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTCAAATCTGGTATGA	7648	False	NA	-10	True	AATAAA	-16	NA	12236450	12197607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12200000_12200479_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214022_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307
ES.8698.2	chr13	-	8378	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-84	0	-66	0	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	5877	False	NA	0	True	AATAAA	-26	NA	12273065	12197597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.20	chr13	-	7076	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-73	1291	-55	-1291	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTGTCTCATCTGCTC	5888	False	NA	NA	False	AGTAAA	-18	NA	12273054	12198888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.22	chr13	-	5998	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-66	1516	combination_of_known_junctions	FALSE	canonical	1	2	junction_29	35.6522106589469	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTTCATTTATTTTAA	5877	False	NA	NA	False	TATAAA	-17	NA	12273065	12199907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12265487_12265578_12268649_12268865_12272747
ES.8698.23	chr13	-	6015	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-65	2344	-47	1482	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATACTAAGAAATATAAAAG	5896	False	NA	NA	False	NA	NA	NA	12273046	12199941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.25	chr13	-	4620	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-109	3783	-91	43	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAGTCTCACCGTGAGA	5852	False	NA	89	True	AATATA	-20	NA	12273090	12201380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.29	chr13	-	4538	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-55	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_29	45.675132987628	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGGAGAATATATAGAG	5888	False	NA	55	True	ATTAAA	-24	NA	12273054	12201414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214022_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262869_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.30	chr13	-	7065	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-51	9	intron_retention	FALSE	canonical	3	145	junction_5	17.3361213371876	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGGAGAATATATAGAG	5892	False	NA	55	True	ATTAAA	-24	NA	12273050	12201414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.32	chr13	-	3938	28	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-55	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	38.0305631188725	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAGGAGAATATATAG	5888	False	NA	53	True	ATTAAA	-22	NA	12273054	12201416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.33	chr13	-	4386	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-5	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	35.4998204623855	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAATACAAGGAGAATAT	5956	False	NA	49	True	ATTAAA	-18	NA	12272986	12201420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.34	chr13	-	4539	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-57	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	35.6094127084048	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGAATACAAGGAGAATAT	5886	False	NA	49	True	ATTAAA	-18	NA	12273056	12201420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240521_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.36	chr13	-	4346	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-55	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	35.7783673646509	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGAATACAAGGAGAATA	5888	False	NA	48	True	ATTAAA	-17	NA	12273054	12201421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.38	chr13	-	4514	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-77	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.2313780599056	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGAATACAAGGAGAATA	5866	False	NA	48	True	ATTAAA	-17	NA	12273076	12201421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210174_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.4	chr13	-	3341	8	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-64	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.7379785703832	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	5879	False	NA	0	True	AATAAA	-26	NA	12273063	12197597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12199997_12259452_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.43	chr13	-	4534	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	35.5263848911974	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTGAATACAAGGAGAA	5877	False	NA	46	True	ATTAAA	-15	NA	12273065	12201423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219732_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.53	chr13	-	4611	34	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-48	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	46.0104990613568	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGTTGAATACAAGG	5895	False	NA	42	True	ATTAAA	-11	NA	12273047	12201427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12206075_12206157_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.56	chr13	-	4356	31	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-66	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	48.2253967209072	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGTTGAATACAAGG	5877	False	NA	42	True	ATTAAA	-11	NA	12273065	12201427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262869_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.57	chr13	-	4535	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-47	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	35.5718765099271	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGTTGAATACAAGG	5896	False	NA	42	True	ATTAAA	-11	NA	12273046	12201427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215076_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.58	chr13	-	4335	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-55	-5	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	35.0475223680864	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAGTTGAATACAAG	5888	False	NA	41	True	ATTAAA	-10	NA	12273054	12201428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.6	chr13	-	8301	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-44	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	35.2313780599056	327	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATGATGACTTT	5899	False	NA	-3	True	AATAAA	-23	NA	12273043	12197600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210175_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.62	chr13	-	4143	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-84	4235	-66	-409	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCAGGGGGGATAATCC	5877	False	NA	NA	False	TTTAAA	-15	NA	12273065	12201832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.63	chr13	-	4065	32	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-65	5243	-47	-1417	5prime_fragment	FALSE	canonical	3	145	junction_4	16.2457710818448	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTGTAAG	5896	False	NA	NA	False	AATAAA	-17	NA	12273046	12202840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.64	chr13	-	3546	28	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-84	12274	-66	-5557	5prime_fragment	FALSE	canonical	3	154	junction_8	13.5368217037137	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAAGG	5877	False	NA	NA	False	NA	NA	NA	12273065	12209871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.65	chr13	-	3806	20	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-85	31379	-67	2789	5prime_fragment	FALSE	canonical	3	157	junction_17	12.7906648784667	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTATTTATATTTG	5876	False	NA	NA	False	NA	NA	NA	12273066	12228976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.66	chr13	-	2420	14	ISM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-65	47410	-47	-13242	5prime_fragment	FALSE	canonical	3	157	junction_11	11.4395762738593	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTGTCAACTCAGTC	5896	False	NA	NA	False	ATTAAA	-15	NA	12273046	12245007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.67	chr13	-	1807	1	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	13896	-25513	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAAAGCCTGTCCCCTAG	1098	False	NA	NA	False	NA	NA	NA	12259085	12257278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12257300_12259100
ES.8698.7	chr13	-	7870	34	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-44	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	35.0725340491402	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATGATGACTTT	5899	False	NA	-3	True	AATAAA	-23	NA	12273043	12197600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12199993_12200475_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.8	chr13	-	7666	34	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.0725340491402	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGTATGATGACTTT	5928	False	NA	-3	True	AATAAA	-23	NA	12273014	12197600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12199999_12200656_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8698.9	chr13	-	8143	32	NIC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-37	-5	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	35.0475223680864	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATCTGGTATGATGACT	5906	False	NA	-5	True	AATAAA	-21	NA	12273036	12197602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12201978_12202926_12203040_12204232_12204426_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ES.8699.1	chr13	+	218	1	Intergenic	novelGene_7163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGACTTTGGGAAATT	NA	False	NA	NA	False	NA	NA	NA	12296904	12297122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12296900_12297100
ES.87.1	chr1	+	2053	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGACCAAGACTTTGAAA	4013	False	NA	NA	False	AGTAAA	-13	NA	10288926	10290979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10288900_10291000
ES.870.1	chr1	+	8375	1	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGGAAAAAAAAAAAAAAAAA	9515	False	NA	NA	False	AAAAAG	-22	NA	84719883	84728258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84719900_84728300
ES.8700.3	chr13	-	2838	19	NIC	ENSMUSG00000052374.17	novel	3013	21	NA	NA	0	-1	intron_retention	TRUE	canonical	0	0	junction_8	25.5724581783596	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGGAAACTTTGACAAA	NA	False	NA	-7	True	AATAAA	-19	NA	12355641	12284321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679_12293863_12295314_12295456_12297400_12297510_12303392_12303544_12305559_12305708_12306545_12306777_12309195_12309289_12315820_12315903_12321159_12321248_12323785_12323873_12324480_12324601_12325732_12325848_12355255
ES.8700.4	chr13	-	2425	1	NIC	ENSMUSG00000052374.17	novel	3013	21	NA	NA	2	-30082	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12355611	12353186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12353200_12355600
ES.8701.1	chr13	+	118	1	FSM	ENSMUSG00000094185.3	ENSMUST00000180224.3	480	1	425	-63	425	63	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCACCCTAATAACAGA	NA	False	NA	NA	False	AATAAA	-43	NA	12393463	12393581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_12393500_12393600
ES.8702.1	chr13	+	6935	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	-148	-7	-148	7	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGTCTTTATCCTGAG	1566	False	NA	12	True	AGTAAA	-26	NA	12410103	12453781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.12	chr13	+	5776	38	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	82.4689507059065	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACTGGTATTTGTCTT	1702	False	NA	3	True	AGTAAA	-17	NA	12410239	12453772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421513_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.15	chr13	+	6450	42	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	83.9725529504638	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1712	False	NA	6	True	AGTAAA	-20	NA	12410249	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441792_12446569_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.2	chr13	+	6886	46	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-67	48205	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_45	82.2703642845112	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTCTTGGGAGTATAACA	1647	False	NA	NA	False	NA	NA	NA	12410184	12503375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469_12453782_12503343
ES.8702.20	chr13	+	6755	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.9269318922258	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1718	False	NA	6	True	AGTAAA	-20	NA	12410255	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417616_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.22	chr13	+	6771	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	82.9269318922258	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1720	False	NA	9	True	AGTAAA	-23	NA	12410257	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417601_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.24	chr13	+	6728	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_37	81.5947295889521	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1722	False	NA	9	True	AGTAAA	-23	NA	12410259	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448540_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.25	chr13	+	7162	44	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	8	-1	intron_retention	FALSE	canonical	3	181	junction_13	61.2137465694133	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGGTATTTGTCTTT	1722	False	NA	4	True	AGTAAA	-18	NA	12410259	12453773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.28	chr13	+	6747	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	94.3266562457951	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1724	False	NA	6	True	AGTAAA	-20	NA	12410261	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424183_12425282_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445813_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.29	chr13	+	6852	44	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	10	1	intron_retention	FALSE	canonical	3	181	junction_14	61.2736725922932	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1724	False	NA	6	True	AGTAAA	-20	NA	12410261	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.3	chr13	+	6703	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	83.1999079932342	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGGTATTTGTCTTT	1689	False	NA	4	True	AGTAAA	-18	NA	12410226	12453773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428169_12428372_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.30	chr13	+	2641	3	ISM	ENSMUSG00000050244.10	ENSMUST00000221046.2	1325	10	-31	7333	10	2786	5prime_fragment	FALSE	canonical	3	347	junction_2	6.5	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1724	False	NA	NA	False	NA	NA	NA	12410261	12413679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12410352_12410620_12410795_12411302
ES.8702.32	chr13	+	7166	44	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	10	1	intron_retention	FALSE	canonical	3	181	junction_14	61.347805763849	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1724	False	NA	6	True	AGTAAA	-20	NA	12410261	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.38	chr13	+	8076	42	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	14	4	intron_retention	FALSE	canonical	3	181	junction_13	60.3190900415319	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1728	False	NA	9	True	AGTAAA	-23	NA	12410265	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450710_12452714_12452824_12453469
ES.8702.4	chr13	+	6818	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	83.0493822776197	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1689	False	NA	9	True	AGTAAA	-23	NA	12410226	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429456_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.45	chr13	+	6844	44	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-19	4	intron_retention	FALSE	canonical	3	181	junction_14	61.0432114279599	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1736	False	NA	9	True	AGTAAA	-23	NA	12410273	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.48	chr13	+	6688	44	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	101.053059974612	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1737	False	NA	9	True	AGTAAA	-23	NA	12410274	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421517_12422397_12422461_12424014_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.49	chr13	+	6722	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	113.86841760965	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACTGGTATTTGTCT	1737	False	NA	2	True	AGTAAA	-16	NA	12410274	12453771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422510_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432560_12432978_12433111_12435934_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.5	chr13	+	6824	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-25	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	81.9876370190466	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1689	False	NA	9	True	AGTAAA	-23	NA	12410226	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449052_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.50	chr13	+	672	4	ISM	ENSMUSG00000050244.10	ENSMUST00000221046.2	1325	10	-17	7024	-17	3095	5prime_fragment	FALSE	canonical	3	332	junction_3	11.4406682011537	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGGTTTGCTTTGGT	1738	False	NA	NA	False	TATAAA	-16	NA	12410275	12413988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783
ES.8702.51	chr13	+	7574	42	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-17	-4	intron_retention	FALSE	canonical	0	0	junction_10	83.5822947758675	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAACTGGTATTTGTC	1738	False	NA	1	True	AGTAAA	-15	NA	12410275	12453770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12418160_12419768_12419872_12420903_12421015_12421405_12421513_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448933_12449067_12449173_12449254_12449424_12449927_12450710_12452714_12452824_12453469
ES.8702.52	chr13	+	6739	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	113.693331175223	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1743	False	NA	9	True	AGTAAA	-23	NA	12410280	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410345_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416027_12416330_12416472_12417594_12417807_12418025_12418160_12419771_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.54	chr13	+	6755	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-5	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	95.91562881637	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1750	False	NA	9	True	AGTAAA	-23	NA	12410287	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424183_12425282_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429456_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.56	chr13	+	3693	24	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	44	20518	3	4633	5prime_fragment	FALSE	canonical	3	181	junction_14	45.483830401334	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTATGTCTTCACCAT	1758	False	NA	NA	False	AAGAAA	-28	NA	12410295	12433256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978
ES.8702.57	chr13	+	6682	44	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	368	-1	327	1	3prime_fragment	FALSE	canonical	3	181	junction_13	61.317295345531	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	2082	False	NA	6	True	AGTAAA	-20	NA	12410619	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.58	chr13	+	4670	23	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	458	19396	417	5755	internal_fragment	FALSE	canonical	3	181	junction_13	46.4225116379635	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGTGGGTTATTTCAT	2172	False	NA	NA	False	NA	NA	NA	12410709	12434378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978
ES.8702.59	chr13	+	5906	39	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	7342	-1	7301	1	3prime_fragment	FALSE	canonical	3	181	junction_8	63.7345440500139	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	9056	False	NA	6	True	AGTAAA	-20	NA	12417593	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.60	chr13	+	5701	38	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	7769	-4	7728	4	3prime_fragment	FALSE	canonical	3	181	junction_7	64.3031761737599	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	9483	False	NA	9	True	AGTAAA	-23	NA	12418020	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.61	chr13	+	5455	36	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	10650	2	-6185	-2	3prime_fragment	FALSE	canonical	3	181	junction_5	64.1243434942724	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACTGGTATTTGTCTT	NA	False	NA	3	True	AGTAAA	-17	NA	12420901	12453772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.62	chr13	+	5230	34	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	12143	-1	-4692	1	3prime_fragment	FALSE	canonical	3	181	junction_3	64.6317391688401	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	NA	False	NA	6	True	AGTAAA	-20	NA	12422394	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.63	chr13	+	3131	21	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-3548	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	104.747732672359	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	NA	False	NA	9	True	AGTAAA	-23	NA	12423538	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12423631_12424089_12424166_12436903_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.64	chr13	+	4933	31	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	15024	1	-1811	-1	3prime_fragment	FALSE	canonical	3	300	junction_1	54.3166538815573	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGGTATTTGTCTTT	NA	False	NA	4	True	AGTAAA	-18	NA	12425275	12453773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.65	chr13	+	5835	23	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	1392	-2	intron_retention	FALSE	canonical	3	336	junction_6	48.4839583251619	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACTGGTATTTGTCTT	NA	False	NA	3	True	AGTAAA	-17	NA	12428478	12453772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12450710_12452714_12452824_12453469
ES.8702.66	chr13	+	3508	24	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	3883	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	97.5351616109421	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAACTGGTATTTGTCTT	NA	False	NA	3	True	AGTAAA	-17	NA	12430969	12453772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450008_12450550_12450710_12452714_12452824_12453469
ES.8702.67	chr13	+	3745	18	NIC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-3392	4	intron_retention	FALSE	canonical	3	354	junction_1	49.9951554746483	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	NA	False	NA	9	True	AGTAAA	-23	NA	12436229	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12436303_12436921_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.68	chr13	+	3914	13	ISM	ENSMUSG00000050244.10	ENSMUST00000222091.2	2482	17	3161	1399	3161	-3	internal_fragment	FALSE	canonical	3	376	junction_3	50.0738343737414	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACTGGTATTTGTCT	NA	False	NA	2	True	AGTAAA	-16	NA	12442782	12453771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.69	chr13	+	3576	12	NIC	ENSMUSG00000050244.10	novel	2482	17	NA	NA	3967	-3	intron_retention	FALSE	canonical	3	376	junction_3	50.7346035758633	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACTGGTATTTGTCT	NA	False	NA	2	True	AGTAAA	-16	NA	12443588	12453771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450710_12452714_12452824_12453469
ES.8702.7	chr13	+	6804	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-22	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	77.8703627089906	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	1692	False	NA	9	True	AGTAAA	-23	NA	12410229	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424183_12425282_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8702.70	chr13	+	3389	9	NIC	ENSMUSG00000050244.10	novel	2482	17	NA	NA	-3654	1	intron_retention	FALSE	canonical	3	376	junction_1	53.3383949421053	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	NA	False	NA	6	True	AGTAAA	-20	NA	12445256	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12450710_12452714_12452824_12453469
ES.8702.71	chr13	+	3509	7	NIC	ENSMUSG00000050244.10	novel	2482	17	NA	NA	-3490	4	intron_retention	FALSE	canonical	3	376	junction_1	60.070560362146	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATTTGTCTTTATCCT	NA	False	NA	9	True	AGTAAA	-23	NA	12445420	12453778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_12445933_12446560_12446854_12447509_12447661_12448492_12449173_12449254_12450710_12452714_12452824_12453469
ES.8702.72	chr13	+	174	1	Intergenic	novelGene_7165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	12497015	12497189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12497000_12497200
ES.8702.8	chr13	+	6769	45	NNC	ENSMUSG00000050244.10	novel	6780	45	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	82.6926001266285	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTATTTGTCTTTAT	1696	False	NA	6	True	AGTAAA	-20	NA	12410233	12453775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420933_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ES.8703.1	chr13	-	174	1	Intergenic	novelGene_7164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAGTTTATGAG	NA	False	NA	NA	False	NA	NA	NA	12414690	12414516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_12414500_12414700
ES.8704.1	chr13	-	2575	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	226	-9	-6	7	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGAATAGTTTTTAGA	NA	False	NA	-4	True	ATTAAA	-27	NA	12476393	12454288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ES.8704.2	chr13	-	2701	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	42	-7	32	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATACTCTCTGGAATA	NA	False	NA	-13	True	ATTAAA	-18	NA	12476342	12454297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ES.8704.3	chr13	-	2514	9	NIC	ENSMUSG00000057554.14	novel	2792	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	25.3118055460293	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATACTCTCTGGAATA	NA	False	NA	-13	True	ATTAAA	-18	NA	12476368	12454297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12455876_12462027_12462194_12463299_12463389_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ES.8704.5	chr13	-	2695	10	NIC	ENSMUSG00000057554.14	novel	2736	10	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	18.0664069955372	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATACTCTCTGGAATA	NA	False	NA	-13	True	ATTAAA	-18	NA	12476309	12454297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468138_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ES.8704.6	chr13	-	2700	9	NIC	ENSMUSG00000057554.14	novel	2736	10	NA	NA	32	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	24.3153115340931	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAATACTCTCTGGAAT	NA	False	NA	-14	True	ATTAAA	-17	NA	12476342	12454298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12455876_12462027_12462194_12463299_12463389_12467602_12467660_12468138_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ES.8704.7	chr13	-	2490	11	NNC	ENSMUSG00000057554.14	novel	2843	11	NA	NA	2	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.9257945276406	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGCTTATTTTCATTT	NA	False	NA	NA	False	AATAAA	-12	NA	12476382	12454505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_12455878_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12469940_12470082_12471224_12471314_12474054_12474198_12476307
ES.8704.8	chr13	-	1935	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	218	639	-14	-632	multi-exon	FALSE	canonical	0	0	junction_5	18.5718491337539	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAACCCAGGGGCGTA	NA	False	NA	NA	False	TATAAA	-13	NA	12476401	12454936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ES.8704.9	chr13	-	2973	8	NIC	ENSMUSG00000057554.14	novel	2792	10	NA	NA	2	46	intron_retention	FALSE	canonical	3	48	junction_3	5.76760835376753	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGCCATGTCAAATGCA	NA	False	NA	-19	True	AATACA	-16	NA	12476382	12455679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ES.8705.1	chr13	+	199	1	Intergenic	novelGene_7166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTTTAAAAATT	5258	False	NA	NA	False	NA	NA	NA	12571216	12571415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12571200_12571400
ES.8706.1	chr13	-	195	1	Intergenic	novelGene_7167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAATCTTGGAGT	NA	False	NA	NA	False	NA	NA	NA	12572199	12572004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_12572000_12572200
ES.8707.1	chr13	+	4277	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	-34	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	25.3382223173624	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	12580720	12624417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.10	chr13	+	4236	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	27.2591493720878	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTTTTGTTTCTTTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	12580764	12624414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12594056_12594147_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.2	chr13	+	1833	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	-10	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	25.3382223173624	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGTTTCACATTTTGT	NA	False	NA	NA	False	TATAAA	-40	NA	12580744	12621997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.3	chr13	+	3520	8	ISM	ENSMUSG00000057069.8	ENSMUST00000221560.2	1964	16	-7	12452	-7	-12452	intron_retention	FALSE	canonical	3	39	junction_1	14.8365241542483	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAAAGTTGTTTTATG	NA	False	NA	NA	False	AATAAA	-11	NA	12580747	12608549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865
ES.8707.4	chr13	+	4262	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	27.2591493720878	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATCTTTTGTTTCTTTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	12580754	12624413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605842_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.6	chr13	+	4139	16	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.1648465647956	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	12580755	12624417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12580897_12580999_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.7	chr13	+	4158	14	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	24.8886276636991	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	12580755	12624417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610575_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8707.9	chr13	+	2318	15	NNC	ENSMUSG00000057069.8	novel	4239	16	NA	NA	-4	510	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	25.3382223173624	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCTATTTATTTAAT	NA	False	NA	NA	False	NA	NA	NA	12580759	12622500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605917_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ES.8708.1	chr13	+	4024	4	Antisense	novelGene_ENSMUSG00000097715.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTCCTGTATGGCCT	NA	False	NA	NA	False	TTTAAA	-24	NA	12648557	12667637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_12648622_12650155_12650235_12655725_12655893_12663923
ES.8708.2	chr13	+	2984	1	Intergenic	novelGene_7168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACACAAGGTCAGTGCC	NA	False	NA	NA	False	NA	NA	NA	12654525	12657509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12654500_12657500
ES.8709.1	chr13	+	176	1	Intergenic	novelGene_7169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12789106	12789282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12789100_12789300
ES.871.1	chr1	+	4705	3	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	84738934	84745770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84741653_84743700_84743797_84743879
ES.871.2	chr1	+	1529	1	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTTTAAAGGAGATTCC	NA	False	NA	NA	False	AATACA	-5	NA	84738934	84740463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84738900_84740500
ES.871.3	chr1	+	3033	2	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	84740693	84745774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_84741653_84743700
ES.8710.1	chr13	+	177	1	Intergenic	novelGene_7170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12995995	12996172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_12996000_12996200
ES.8711.1	chr13	+	229	1	Intergenic	novelGene_7171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATAGGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	13154093	13154322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_13154100_13154300
ES.8712.1	chr13	-	1328	4	Antisense	novelGene_ENSMUSG00000113221.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGTTGTGTTTCAGC	NA	False	NA	NA	False	AATAAA	-22	NA	13394886	13360739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_13361680_13363572_13363678_13391721_13391866_13394747
ES.8713.1	chr13	-	1370	2	Genic_Genomic	ENSMUSG00000061724.6	novel	733	1	NA	NA	-74	705	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCCTACCTCCAATAG	NA	False	NA	NA	False	AATAAA	-40	NA	13407552	13406040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_13407370_13407511
ES.8713.2	chr13	-	1508	1	FSM	ENSMUSG00000061724.6	ENSMUST00000074863.6	733	1	-71	-704	-71	704	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGCCTACCTCCAATA	NA	False	NA	NA	False	AATAAA	-39	NA	13407549	13406041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13406000_13407500
ES.8714.1	chr13	-	1559	1	Intergenic	novelGene_7172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGACTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	13416151	13414592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_13414600_13416200
ES.8715.1	chr13	+	3468	9	NNC	ENSMUSG00000110123.2	novel	915	10	NA	NA	7339	2635	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	24.4015880630749	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	13505287	13527647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13505348_13505450_13505502_13510197_13510228_13517810_13517904_13518036_13518284_13519905_13519976_13520480_13520568_13522598_13522733_13524951
ES.8715.2	chr13	+	4882	7	ISM	ENSMUSG00000110123.2	ENSMUST00000209949.2	915	10	10724	-2635	10724	2635	3prime_fragment	FALSE	canonical	2	6	junction_1	22.1032928668005	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	13508672	13527647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13510228_13517810_13517904_13518036_13518284_13519905_13519976_13520480_13520568_13522598_13522733_13524951
ES.8716.1	chr13	+	1978	1	Intergenic	novelGene_7173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAACTTGGAACACTCAT	NA	False	NA	NA	False	NA	NA	NA	13552232	13554210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_13552200_13554200
ES.8717.1	chr13	-	4652	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-21	-997	-21	1	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCAACTGGTGCTGGAA	NA	False	NA	NA	False	AATAAA	-20	NA	13568230	13532203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.10	chr13	-	2936	7	NNC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	101.327302452114	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	False	NA	NA	False	AATAAA	-43	NA	13568179	13532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535882_13536008_13538028_13538158_13539642_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.11	chr13	-	3078	8	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.3853332093257	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	False	NA	NA	False	AATAAA	-43	NA	13568161	13532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534020_13535520_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.12	chr13	-	3091	9	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	82.2267254303611	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTTGTCAACTGGTG	NA	False	NA	NA	False	AATAAA	-41	NA	13568160	13532209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.13	chr13	-	4800	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	1	-1	intron_retention	FALSE	canonical	3	175	junction_2	24.3343378788082	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAAAGACTACAGCTC	NA	False	NA	NA	False	AATAAA	-21	NA	13568179	13532229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.14	chr13	-	1309	1	ISM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	34447	239	8638	-215	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTGTGTCCTTGTCTC	4778	False	NA	NA	False	NA	NA	NA	13533752	13532443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_13532400_13533800
ES.8717.15	chr13	-	3902	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-88	-180	-88	-1	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGCAGACTCCTGACAG	NA	False	NA	NA	False	AATAAA	-25	NA	13568297	13533020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.16	chr13	-	2464	8	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	76.7125565115035	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGATTGCAGACTCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	13568214	13533024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535359_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.18	chr13	-	2251	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-81	181	-21	0	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568230	13533200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.19	chr13	-	3811	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-12	0	intron_retention	FALSE	canonical	3	175	junction_2	24.3343378788082	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568161	13533200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.2	chr13	-	3209	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-43	-815	7	0	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568192	13532204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.20	chr13	-	3683	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-49	0	-49	0	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568258	13533200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.21	chr13	-	5104	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-10	0	intron_retention	FALSE	canonical	2	6	junction_5	88.6282122125906	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568159	13533200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567662
ES.8717.23	chr13	-	1988	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-13	996	-3	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568212	13533200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.24	chr13	-	3102	4	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_2	94.9959063445485	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTGTAGAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13568180	13533201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13548943_13548994_13567709
ES.8717.25	chr13	-	3413	6	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	15	-1	intron_retention	FALSE	canonical	3	25	junction_1	81.2659830433374	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTGTAGAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13568165	13533201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13534009_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.26	chr13	-	3695	7	NIC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	34	junction_1	71.1135633257742	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTGTAGAGTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	13568202	13533201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.27	chr13	-	3387	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	135	-2	intron_retention	FALSE	canonical	1	10	junction_5	85.0256431907457	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCATTTTGTAGAGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	13568014	13533202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13567709
ES.8717.28	chr13	-	3497	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-11	-7	intron_retention	FALSE	canonical	3	23	junction_4	69.6806124765134	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTAGCCATTTTGTAG	NA	False	NA	NA	False	ATTAAA	-13	NA	13568160	13533207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.29	chr13	-	3309	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-3	328	-3	-328	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAATACGTGGTCTAATA	NA	False	NA	NA	False	TTTAAA	-5	NA	13568212	13533528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.3	chr13	-	4544	8	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_2	93.361706085875	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568161	13532204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535412_13535460_13535566_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.30	chr13	-	1778	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-16	589	15	-408	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTTTTTCCTTGATTG	NA	False	NA	NA	False	TATAAA	-40	NA	13568165	13533608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.31	chr13	-	1365	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	202	1404	152	-408	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTTTTTCCTTGATTG	NA	False	NA	NA	False	TATAAA	-40	NA	13567997	13533608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.32	chr13	-	3023	6	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	-4	-410	intron_retention	FALSE	canonical	3	25	junction_1	81.2659830433374	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTAGGTTTTTCCTTGAT	NA	False	NA	NA	False	TATAAA	-38	NA	13568184	13533610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13534009_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.33	chr13	-	1661	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-3	-415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	77.3853332093257	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATACTAGGTTTTTCC	NA	False	NA	NA	False	TATAAA	-33	NA	13568152	13533615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534020_13535520_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.34	chr13	-	3221	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-21	434	-21	-434	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTTAAATACTAATGCTA	NA	False	NA	NA	False	TATAAA	-36	NA	13568230	13533634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.35	chr13	-	3996	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	4686	-508	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGGCTATTTCAGTGGG	826	False	NA	NA	False	AATAAA	-20	NA	13537704	13533708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13533700_13537700
ES.8717.36	chr13	-	3302	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-12	-509	intron_retention	FALSE	canonical	3	175	junction_2	24.3343378788082	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGGCTATTTCAGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	13568161	13533709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.37	chr13	-	1476	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-13	1508	-3	-512	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATCTGGCTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	13568212	13533712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.38	chr13	-	1495	7	FSM	ENSMUSG00000021306.12	ENSMUST00000222958.2	2975	7	-4	1484	-4	-512	multi-exon	FALSE	canonical	2	6	junction_6	98.1201078044432	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATCTGGCTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	13568184	13533712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567662
ES.8717.39	chr13	-	1624	9	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-12	-512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.7813280989345	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATCTGGCTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	13568161	13533712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535359_13535422_13535520_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.4	chr13	-	3025	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	-54	0	-44	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568253	13532204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.40	chr13	-	1667	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	-11	695	-11	-514	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGAATCTGGCTATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	13568160	13533714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.41	chr13	-	3214	7	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-12	-516	intron_retention	FALSE	canonical	3	23	junction_3	74.9942590395351	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGAGAATCTGGCTATT	NA	False	NA	NA	False	AATAAA	-12	NA	13568161	13533716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.42	chr13	-	4781	5	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	6	-516	intron_retention	FALSE	canonical	3	203	junction_4	15.335824073065	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGAGAATCTGGCTATT	NA	False	NA	NA	False	AATAAA	-12	NA	13568174	13533716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.44	chr13	-	1402	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	-21	2253	-21	-2253	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTCATCTCGTTCAT	NA	False	NA	39	True	NA	NA	NA	13568230	13535453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.45	chr13	-	2758	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-11	-2300	intron_retention	FALSE	canonical	3	200	junction_1	17.0340834798941	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGAAATTTGTCATT	NA	False	NA	-8	True	AATATA	-39	NA	13568160	13535500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.46	chr13	-	2805	6	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-11	-2300	intron_retention	FALSE	canonical	2	6	junction_5	88.6282122125906	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGAAATTTGTCATT	NA	False	NA	-8	True	AATATA	-39	NA	13568160	13535500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567662
ES.8717.47	chr13	-	1205	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-12	-2300	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	69.6806124765134	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGAAATTTGTCATT	NA	False	NA	-8	True	AATATA	-39	NA	13568161	13535500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.48	chr13	-	1387	7	NIC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-6	-2300	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	80.9349876272445	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGAAATTTGTCATT	NA	False	NA	-8	True	AATATA	-39	NA	13568215	13535500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567662
ES.8717.49	chr13	-	2676	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	-4	-25792	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGTATTGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	13568184	13565508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13565500_13568200
ES.8717.5	chr13	-	4444	6	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	81.2659830433374	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568199	13532204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_13534009_13535882_13536008_13538028_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.6	chr13	-	4592	8	NNC	ENSMUSG00000021306.12	novel	3634	7	NA	NA	-43	0	intron_retention	FALSE	canonical	3	23	junction_4	69.6806124765134	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568252	13532204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.7	chr13	-	2957	7	NNC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.2199228283442	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	False	NA	NA	False	AATAAA	-43	NA	13568199	13532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13533998_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.8	chr13	-	2918	8	NNC	ENSMUSG00000021306.12	novel	2351	8	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	88.7916616787493	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	False	NA	NA	False	AATAAA	-43	NA	13568230	13532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539682_13539762_13539781_13542173_13542397_13548943_13548994_13567709
ES.8717.9	chr13	-	3048	7	FSM	ENSMUSG00000021306.12	ENSMUST00000222958.2	2975	7	-52	-21	-23	-3	multi-exon	FALSE	canonical	2	6	junction_6	98.1201078044432	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	False	NA	NA	False	AATAAA	-43	NA	13568232	13532207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567662
ES.8718.1	chr13	-	205	1	Intergenic	novelGene_7174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	341	False	NA	NA	False	NA	NA	NA	13589787	13589582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_13589600_13589800
ES.8719.1	chr13	+	6141	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-13392	30	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGGGTGTTGCAGTGTTG	8278	False	NA	42	True	NA	NA	NA	13598743	13686884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13598795_13612166_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.10	chr13	+	3906	9	ISM	ENSMUSG00000005397.9	ENSMUST00000222142.2	3803	14	-89	16011	27	-16011	5prime_fragment	FALSE	canonical	0	0	junction_7	245.499713594538	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAATAAATAATT	NA	False	NA	NA	False	NA	NA	NA	13612162	13660038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234
ES.8719.11	chr13	+	6348	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	31	-15	intron_retention	FALSE	non_canonical	0	0	junction_7	240.253997634798	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612166	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13685447_13685543
ES.8719.12	chr13	+	6036	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	31	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	243.457835058812	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612166	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663732_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.15	chr13	+	4929	16	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	35	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	205.872279716225	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612170	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13656744_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.16	chr13	+	7162	19	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	36	5	intron_retention	FALSE	canonical	0	0	junction_7	188.376363488065	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612171	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.17	chr13	+	6636	19	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	41	-5	intron_retention	FALSE	canonical	0	0	junction_7	187.70590340434	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612176	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13684131_13684530
ES.8719.19	chr13	+	5982	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	45	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	241.009982437137	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612180	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682334_13683332_13683427_13684017_13684131_13684530
ES.8719.2	chr13	+	6135	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-227	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	238.696517569905	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13611908	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612100_13612277_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.21	chr13	+	9900	16	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	49	-15	intron_retention	FALSE	canonical	0	0	junction_7	198.981294486581	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612184	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13677111_13680920_13682353_13683302
ES.8719.22	chr13	+	5952	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	51	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.696517569905	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGATGTGTTTTTGCTG	NA	False	NA	11	True	ATTAAA	-26	NA	13612186	13686853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612367_13612453_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.23	chr13	+	6055	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	51	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	285.163033506572	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612186	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647520_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675015_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.24	chr13	+	6116	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	52	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	240.253997634798	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612187	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684223_13684530
ES.8719.25	chr13	+	6003	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	52	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	242.744807465055	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612187	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683406_13684017_13684131_13684530
ES.8719.26	chr13	+	6447	19	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	52	-8	52	8	intron_retention	FALSE	canonical	0	0	junction_7	185.015781775969	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGTTTTGTTCC	NA	False	NA	20	True	ATTAAA	-35	NA	13612187	13686862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017
ES.8719.27	chr13	+	4483	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	52	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTTTTGCTGTTTTG	NA	False	NA	16	True	ATTAAA	-31	NA	13612187	13686858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685034_13686593
ES.8719.28	chr13	+	3721	17	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	52	-2336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	251.010426825262	1103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTGGGAGGTTACT	NA	False	NA	NA	False	AATAAA	-15	NA	13612187	13682597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674145_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194
ES.8719.3	chr13	+	5862	20	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	-225	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	244.691620043817	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATTAAAATAC	NA	False	NA	-30	True	NA	NA	NA	13611910	13686812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612100_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.32	chr13	+	2696	3	NNC	ENSMUSG00000005397.9	novel	3803	14	NA	NA	54	-16	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	364	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAAAATCTTATTTT	NA	False	NA	-4	True	ATTAAA	-11	NA	13612189	13686838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638391_13684548
ES.8719.33	chr13	+	4856	14	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	54	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	217.770521421059	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612189	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647505_13664676_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.34	chr13	+	6034	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	54	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	242.744807465055	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612189	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684025_13684131_13684530
ES.8719.35	chr13	+	5916	19	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	54	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	251.167010739768	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612189	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.36	chr13	+	5988	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	54	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTTTTGTTCCAC	NA	False	NA	22	True	ATTAAA	-37	NA	13612189	13686864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685020_13685078
ES.8719.38	chr13	+	5961	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	57	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612192	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652920_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685384_13685437
ES.8719.39	chr13	+	6038	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-57	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	241.886571709566	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTGTTTTGTTCCA	NA	False	NA	21	True	ATTAAA	-36	NA	13612194	13686863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674376_13675037_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.4	chr13	+	6212	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	-111	-10	-111	10	multi-exon	FALSE	canonical	0	0	junction_7	184.261632008595	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTTTTGTTCCAC	NA	False	NA	22	True	ATTAAA	-37	NA	13612024	13686864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.42	chr13	+	5928	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	69	94	-47	-94	multi-exon	FALSE	canonical	0	0	junction_7	184.261632008595	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGTATTGGATGATTCC	NA	False	NA	-82	True	NA	NA	NA	13612204	13686760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.43	chr13	+	6375	19	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_7	246.742612182547	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTGTTTTTGCTGT	NA	False	NA	12	True	ATTAAA	-27	NA	13612209	13686854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13677025_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017
ES.8719.44	chr13	+	5626	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-33	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATCTTATTTTGATGTG	NA	False	NA	2	True	ATTAAA	-17	NA	13612218	13686844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685596_13685967
ES.8719.45	chr13	+	4928	14	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-31	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	284.96139051254	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612220	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656825_13677088_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.46	chr13	+	5867	19	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-30	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	248.259099021393	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTGCTGTTTTGTT	NA	False	NA	18	True	ATTAAA	-33	NA	13612221	13686860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.49	chr13	+	5844	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612249	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13684977_13685094
ES.8719.5	chr13	+	6189	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-92	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	243.483354758228	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612043	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664764_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.52	chr13	+	1761	7	ISM	ENSMUSG00000005397.9	ENSMUST00000222142.2	3803	14	0	23132	0	-23132	5prime_fragment	FALSE	canonical	3	649	junction_6	46.8736481286542	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGGTAAGTCCCAGACC	NA	False	NA	NA	False	NA	NA	NA	13612251	13652917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722
ES.8719.53	chr13	+	5950	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	0	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	241.009982437137	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612251	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682343_13683302_13683427_13684017_13684131_13684530
ES.8719.55	chr13	+	5734	19	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	188.493188467821	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612251	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.57	chr13	+	4491	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612265	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685080_13686544
ES.8719.58	chr13	+	5580	19	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	29	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	246.803990803518	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTGCTGTTTTGTT	NA	False	NA	18	True	ATTAAA	-33	NA	13612280	13686860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664681_13675102_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.6	chr13	+	7076	18	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	11	-5	11	5	intron_retention	FALSE	canonical	0	0	junction_7	188.361593658044	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13612146	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302
ES.8719.60	chr13	+	6085	20	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	183	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	240.253997634798	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13612434	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684222
ES.8719.61	chr13	+	5787	20	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	7818	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	244.691620043817	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13620069	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13620147_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.62	chr13	+	5898	21	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	7819	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	281.150044460249	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13620070	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13620147_13620338_13620451_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.63	chr13	+	5793	20	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	8006	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	244.691620043817	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13620257	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13620341_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.64	chr13	+	5870	20	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	10486	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	244.251346406947	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13622737	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13622888_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.65	chr13	+	5688	19	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	26164	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	249.103726721755	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTGTTTTGTTCCAC	128	False	NA	22	True	ATTAAA	-37	NA	13638415	13686864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683431_13683949_13684131_13684530
ES.8719.67	chr13	+	5183	18	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	27789	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	255.564400161207	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATTAAAATAC	1753	False	NA	-30	True	NA	NA	NA	13640040	13686812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663730_13664662_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.68	chr13	+	5303	18	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	30359	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	257.297546979486	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	4323	False	NA	7	True	ATTAAA	-22	NA	13642610	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13642731_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.69	chr13	+	5189	17	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	30676	3	30560	-3	3prime_fragment	FALSE	canonical	0	0	junction_4	199.944357494154	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGATGTGTTTTTGC	4524	False	NA	9	True	ATTAAA	-24	NA	13642811	13686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.7	chr13	+	5316	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	278.102045120132	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGATGTGTTTTTGCTG	NA	False	NA	11	True	ATTAAA	-26	NA	13612158	13686853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674370_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13685544_13686292
ES.8719.70	chr13	+	5103	18	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	30727	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	299.574819810277	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTGCTGTTTTGTT	4691	False	NA	18	True	ATTAAA	-33	NA	13642978	13686860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13673346_13673419_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.71	chr13	+	4914	17	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	30764	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	263.320859409201	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	4728	False	NA	7	True	ATTAAA	-22	NA	13643015	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681059_13682229_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.72	chr13	+	4934	17	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	30766	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	265.208577998054	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	4730	False	NA	7	True	ATTAAA	-22	NA	13643017	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13643193_13647364_13647468_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.73	chr13	+	4810	16	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	35228	2	35112	-2	3prime_fragment	FALSE	canonical	0	0	junction_3	206.231972949557	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGTGTTTTTGCT	9076	False	NA	10	True	ATTAAA	-25	NA	13647363	13686852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.74	chr13	+	4658	15	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	38606	5	-32555	-5	3prime_fragment	FALSE	canonical	0	0	junction_2	213.289027340071	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13650741	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.75	chr13	+	4466	15	NNC	ENSMUSG00000005397.9	novel	646	3	NA	NA	-30919	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	282.377452198656	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTTTTTGCTGTTTT	NA	False	NA	15	True	ATTAAA	-30	NA	13652377	13686857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13652432_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.76	chr13	+	4395	14	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	40586	15	-30575	-15	3prime_fragment	FALSE	canonical	0	0	junction_1	220.445890260046	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13652721	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.78	chr13	+	1112	7	NNC	ENSMUSG00000005397.9	novel	3803	14	NA	NA	-30427	-6336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	348.066564515084	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCTTGACTCTATTGT	NA	False	NA	NA	False	AATAAA	-12	NA	13652869	13669713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13669444
ES.8719.79	chr13	+	4249	14	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-30424	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	290.951489480238	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13652872	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663745_13664638_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.8	chr13	+	5946	21	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	238.696517569905	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13612158	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530_13686639_13686755
ES.8719.82	chr13	+	3861	12	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-25050	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	233.740443743316	1219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGTTTTGTTCCACA	NA	False	NA	23	True	ATTAAA	-38	NA	13658246	13686865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682288_13683337_13683427_13684017_13684131_13684530
ES.8719.83	chr13	+	3970	7	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-9155	-42	intron_retention	FALSE	canonical	3	703	junction_2	63.7172573867464	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAATTAAAATAC	NA	False	NA	-30	True	NA	NA	NA	13674141	13686812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13684131_13684530
ES.8719.84	chr13	+	3233	8	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-9034	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	288.574186691204	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13674262	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13674372_13675102_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.8719.85	chr13	+	4150	5	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	64101	15	-7060	-15	intron_retention	FALSE	canonical	3	767	junction_1	37.5790832778023	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	False	NA	-3	True	ATTAAA	-12	NA	13676236	13686839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017
ES.8719.86	chr13	+	5273	3	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-3212	5	intron_retention	FALSE	canonical	3	799	junction_1	44	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTTTTTGCTGTTTTGT	NA	False	NA	17	True	ATTAAA	-32	NA	13680084	13686859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13681093_13682194_13684131_13684530
ES.8719.87	chr13	+	5226	2	NIC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	-2623	-5	intron_retention	FALSE	canonical	3	870	junction_1	0	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTGATGTGTTTTT	NA	False	NA	7	True	ATTAAA	-22	NA	13680673	13686849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_13682353_13683302
ES.8719.88	chr13	+	3907	1	Genic_Genomic	ENSMUSG00000005397.9	novel	NA	NA	NA	NA	-346	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTTTTTGCTGTTTT	NA	False	NA	15	True	ATTAAA	-30	NA	13682950	13686857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_13683000_13686900
ES.8719.9	chr13	+	3889	12	NNC	ENSMUSG00000005397.9	novel	6091	20	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	238.508346614869	1221	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGATGTGTTTTTGC	NA	False	NA	9	True	ATTAAA	-24	NA	13612158	13686851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13612266_13661256_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ES.872.1	chr1	+	251	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTTGAAGTTTGAAG	NA	False	NA	NA	False	CATAAA	-11	NA	84796191	84796442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84796200_84796400
ES.8720.1	chr13	+	5521	1	FSM	ENSMUSG00000114068.2	ENSMUST00000221249.2	1080	1	-1549	-2892	-1549	2892	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-17	NA	13687773	13693294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_13687800_13693300
ES.8721.1	chr13	+	4243	1	Intergenic	novelGene_7175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAGTGTGTCATTCCTT	2329	False	NA	NA	False	NA	NA	NA	13715108	13719351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_13715100_13719400
ES.8722.1	chr13	+	6174	3	ISM	ENSMUSG00000019726.13	ENSMUST00000223053.2	2706	5	-26	13751	-26	-13751	5prime_fragment	FALSE	canonical	1	4	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTTATTTCTGGAAT	NA	False	NA	NA	False	AATAAA	-14	NA	13764955	13797093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13765082_13788426_13788513_13791131
ES.8722.10	chr13	+	5333	3	NNC	ENSMUSG00000019726.13	novel	13181	53	NA	NA	7785	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	6.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACCTGTATAAATGACT	NA	False	NA	NA	False	AATAAA	-17	NA	13943138	13953383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13943966_13948490_13950212_13950598
ES.8722.2	chr13	+	5493	3	ISM	ENSMUSG00000019726.13	ENSMUST00000223053.2	2706	5	1	14405	1	-14405	5prime_fragment	FALSE	canonical	1	4	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAAGTCTTTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	13764982	13796439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13765082_13788426_13788513_13791131
ES.8722.3	chr13	+	13134	53	FSM	ENSMUSG00000019726.13	ENSMUST00000110559.3	13181	53	50	-3	38	3	multi-exon	TRUE	canonical	1	1	junction_5	4.58398776034385	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATGACTTGTGAATG	NA	False	NA	NA	False	AATAAA	-25	NA	13765031	13953391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_13765082_13788426_13788513_13791131_13791331_13805593_13805685_13808614_13810695_13811952_13812962_13814618_13814781_13815651_13815809_13818022_13818250_13818649_13818717_13821612_13821723_13823124_13823552_13824908_13825054_13826161_13826336_13831418_13831580_13833181_13833373_13835512_13835759_13838524_13838699_13844424_13844575_13845387_13845526_13847840_13848040_13848914_13849047_13852233_13852850_13853547_13853726_13854657_13854828_13855876_13856108_13857639_13857807_13858542_13858687_13862203_13862396_13871194_13871374_13872911_13873119_13881086_13881264_13882203_13882281_13882606_13882796_13883872_13884019_13884098_13884196_13885308_13885371_13886202_13886259_13887292_13887446_13900398_13900644_13903149_13903217_13904909_13905067_13915049_13915191_13917824_13918043_13921156_13921388_13926527_13926718_13931895_13932033_13933962_13934062_13935290_13935431_13935688_13935787_13950054_13950212_13950598_13950671_13951625
ES.8722.7	chr13	+	4077	18	ISM	ENSMUSG00000019726.13	ENSMUST00000110559.3	13181	53	119115	8	161	-8	3prime_fragment	FALSE	canonical	1	3	junction_6	4.95935033137835	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTAAACCTGTATAAATG	NA	False	NA	NA	False	AATAAA	-14	NA	13884096	13953380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13884196_13885308_13885371_13886202_13886259_13887292_13887446_13900398_13900644_13903149_13903217_13904909_13905067_13915049_13915191_13917824_13918043_13921156_13921388_13926527_13926718_13931895_13932033_13933962_13934062_13935290_13935431_13935688_13935787_13950054_13950212_13950598_13950671_13951625
ES.8722.8	chr13	+	3858	15	NNC	ENSMUSG00000019726.13	novel	2097	2	NA	NA	11505	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.823947745897	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTAAACCTGTATAAATG	NA	False	NA	NA	False	AATAAA	-14	NA	13895440	13953380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_13895592_13900398_13900644_13903149_13903217_13904909_13905067_13915049_13915191_13917824_13918043_13921156_13921388_13926527_13926718_13931895_13932033_13933962_13934062_13935290_13935431_13935688_13935787_13950054_13950212_13950598_13950671_13951625
ES.8722.9	chr13	+	3700	14	ISM	ENSMUSG00000019726.13	ENSMUST00000110559.3	13181	53	135416	16	16462	-16	3prime_fragment	FALSE	canonical	1	3	junction_2	5.19786027893112	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATAGACTTAAACCTG	NA	False	NA	NA	False	AATAAA	-6	NA	13900397	13953372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_13900644_13903149_13903217_13904909_13905067_13915049_13915191_13917824_13918043_13921156_13921388_13926527_13926718_13931895_13932033_13933962_13934062_13935290_13935431_13935688_13935787_13950054_13950212_13950598_13950671_13951625
ES.8723.1	chr13	-	178	1	Intergenic	novelGene_7176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGCAAATGCT	NA	False	NA	NA	False	NA	NA	NA	13837032	13836854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_13836900_13837000
ES.8724.1	chr13	-	181	1	Intergenic	novelGene_7177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	13850053	13849872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_13849900_13850100
ES.8725.1	chr13	-	203	1	Intergenic	novelGene_7178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGACTCAACATAATCC	NA	False	NA	NA	False	AATAAA	-1	NA	14009481	14009278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14009300_14009500
ES.8726.1	chr13	+	3876	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	47	-31	47	2	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTAGTACCCTGAATG	NA	False	NA	NA	False	AATAAA	-32	NA	14129100	14173690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.10	chr13	+	3841	12	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	-4	-9	intron_retention	FALSE	canonical	1	1	junction_9	61.265173529529	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATAAACTAGCCTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	14129201	14173650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169594_14169861_14170311_14170369_14171477
ES.8726.11	chr13	+	2412	13	FSM	ENSMUSG00000039242.11	ENSMUST00000221974.2	2439	13	-8	35	-4	-6	multi-exon	FALSE	canonical	2	4	junction_12	57.9839537190151	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129201	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171638_14172963
ES.8726.12	chr13	+	3500	11	NNC	ENSMUSG00000039242.11	novel	1876	11	NA	NA	-4	0	intron_retention	FALSE	canonical	2	4	junction_3	90.8286848963476	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129201	14173659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169706_14169861_14170311_14170369_14171477
ES.8726.14	chr13	+	2229	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	152	1511	0	62	multi-exon	FALSE	canonical	3	178	junction_5	19.409889274617	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGCTCGCTAAACTGTTT	NA	False	NA	NA	False	AGTAAA	-30	NA	14129205	14172148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.15	chr13	+	5642	12	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	0	-6	intron_retention	TRUE	canonical	0	0	junction_4	61.2957874059793	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129205	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14152128_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.17	chr13	+	3734	12	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	13	junction_9	58.0022798070034	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129205	14173659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169706_14169861_14170311_14170369_14171477
ES.8726.18	chr13	+	3540	11	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	1	2	intron_retention	FALSE	canonical	2	4	junction_3	63.1249554455288	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTCCTATTTTTGAC	NA	False	NA	NA	False	AATAAA	-24	NA	14129210	14173661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.19	chr13	+	2397	13	NIC	ENSMUSG00000039242.11	novel	2397	13	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	3	6	junction_12	57.4606145304958	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129212	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172939
ES.8726.2	chr13	+	4460	13	NNC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	50	-3	intron_retention	FALSE	canonical	0	0	junction_1	77.8299428240828	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGCCTTTTCCTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	14129103	14173656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14134190_14134812_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.20	chr13	+	2325	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	71.8661467977486	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAACTAGCCTTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	14129217	14173651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
ES.8726.21	chr13	+	3680	13	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	10	0	intron_retention	FALSE	non_canonical	0	0	junction_12	59.0322416612782	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129219	14173659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14172041_14172086
ES.8726.22	chr13	+	3614	11	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	10	-8	intron_retention	FALSE	canonical	0	0	junction_2	95.9627010874538	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAACTAGCCTTTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	14129219	14173651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145364_14145453_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169594_14169861_14170311_14170369_14171477
ES.8726.24	chr13	+	4824	11	ISM	ENSMUSG00000039242.11	ENSMUST00000221974.2	2439	13	15	35	-14	-6	intron_retention	FALSE	canonical	3	178	junction_5	16.8881615340451	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129224	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311
ES.8726.25	chr13	+	3725	11	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	-14	-6	intron_retention	FALSE	canonical	1	1	junction_8	95.6692740643515	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129224	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129510_14140894_14141043_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169594_14169861_14170311_14170369_14171477
ES.8726.26	chr13	+	4779	11	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	-10	-6	intron_retention	FALSE	canonical	3	22	junction_7	56.0165154217932	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129228	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311
ES.8726.27	chr13	+	3337	9	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	-10	-6	intron_retention	FALSE	canonical	0	0	junction_5	71.176606936549	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129228	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.3	chr13	+	3808	12	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	56	1	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGACTCACTTCAACA	NA	False	NA	NA	False	AATAAA	-35	NA	14129109	14173672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.30	chr13	+	3728	12	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	3	-6	intron_retention	FALSE	non_canonical	0	0	junction_4	61.2957874059793	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129241	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155155_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.31	chr13	+	2018	11	NIC	ENSMUSG00000039242.11	novel	2397	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	63.396845347383	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCATGTTTTCTTTTA	NA	False	NA	NA	False	ACTAAA	-37	NA	14129258	14172086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.32	chr13	+	3287	9	NIC	ENSMUSG00000039242.11	novel	2397	13	NA	NA	0	-6	intron_retention	FALSE	canonical	1	1	junction_2	71.4943179560446	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129258	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.33	chr13	+	3469	11	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	15	0	intron_retention	FALSE	canonical	2	4	junction_3	80.8678551712607	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129273	14173659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169706_14169861_14170311_14170369_14171477
ES.8726.34	chr13	+	3831	13	NNC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	109	0	intron_retention	FALSE	canonical	0	0	junction_1	86.6930648898745	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129367	14173659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14129505_14129776_14130027_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170308_14170369_14171477
ES.8726.35	chr13	+	3382	11	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	205	-4	intron_retention	FALSE	canonical	2	3	junction_4	63.396845347383	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTAGCCTTTTCCTATT	NA	False	NA	NA	False	AATAAA	-18	NA	14129463	14173655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ES.8726.36	chr13	+	4015	1	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	2847	-1531	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCTACTTCAGTCA	495	False	NA	NA	False	NA	NA	NA	14164784	14168799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14164800_14168800
ES.8726.4	chr13	+	2476	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	56	-6	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTAGCCTTTTCCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14129109	14173653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
ES.8726.5	chr13	+	3900	4	FSM	ENSMUSG00000039242.11	ENSMUST00000223307.2	2400	4	-90	-1410	62	1410	multi-exon	FALSE	canonical	3	187	junction_2	6.64997911442	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGGACTATATAGCTTG	NA	False	NA	NA	False	NA	NA	NA	14129115	14153284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022
ES.8726.7	chr13	+	5364	10	ISM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	83	5	-69	-5	intron_retention	FALSE	canonical	3	178	junction_5	11.8925228091197	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTAGCCTTTTCCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	14129136	14173654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700
ES.8726.8	chr13	+	1185	4	FSM	ENSMUSG00000039242.11	ENSMUST00000223307.2	2400	4	-67	1282	-67	-1282	multi-exon	FALSE	canonical	3	187	junction_2	6.64997911442	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGTTCAAACTGGA	NA	False	NA	NA	False	NA	NA	NA	14129138	14150592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022
ES.8727.1	chr13	+	4051	1	Antisense	novelGene_ENSMUSG00000039233.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCTGATATACCCTGTA	2703	False	NA	NA	False	NA	NA	NA	14178811	14182862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_14178800_14182900
ES.8728.1	chr13	+	137	1	Intergenic	novelGene_7180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACCAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	14210408	14210545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_14210400_14210500
ES.8729.1	chr13	-	196	1	Intergenic	novelGene_7179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATGGGAGGGGTACAA	NA	False	NA	NA	False	NA	NA	NA	14152840	14152644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14152600_14152800
ES.873.1	chr1	+	907	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	-6	0	-6	0	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	84817555	84878208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
ES.873.2	chr1	+	157	1	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3229	False	NA	NA	False	NA	NA	NA	84843141	84843298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84843100_84843300
ES.873.3	chr1	+	180	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3874	False	NA	NA	False	NA	NA	NA	84843786	84843966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84843800_84844000
ES.8730.1	chr13	-	4912	15	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-5	3247	intron_retention	FALSE	non_canonical	0	0	junction_5	63.7447076634762	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAACAAAATTCC	NA	False	NA	NA	False	AATAAA	-14	NA	14214186	14169286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14179727_14179869_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189227_14189409_14194286_14194473_14202304_14202372_14203860_14203992_14214122
ES.8730.10	chr13	-	2716	14	NIC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-5	0	intron_retention	FALSE	canonical	3	15	junction_12	35.0656189612574	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTCTGCCCTTTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	14214186	14172533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14185227_14189319_14189409_14194286_14194473_14203860_14203992_14214122
ES.8730.11	chr13	-	6498	15	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_12	47.8552238421219	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCTCTGCCCTTTCTG	NA	False	NA	-3	True	AATAAA	-16	NA	14214166	14172534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178117_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14185227_14189319_14189409_14194286_14194797_14199654_14202368_14203860_14203992_14214122
ES.8730.12	chr13	-	4331	13	ISM	ENSMUSG00000039233.13	ENSMUST00000162326.2	1853	17	21836	-2	-7958	0	3prime_fragment	FALSE	canonical	2	7	junction_4	35.292822688662	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTCTCTGCCCTTTCT	NA	False	NA	-4	True	AATAAA	-15	NA	14192387	14172535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178117_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319
ES.8730.13	chr13	-	1785	17	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	34.9729806422043	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCTCTGCCCTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	14214186	14172536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202304_14202368_14203860_14203992_14214122
ES.8730.14	chr13	-	1798	17	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	45.5301668539662	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCTCTGCCCTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	14214186	14172536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178114_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202304_14202368_14203860_14203992_14214122
ES.8730.15	chr13	-	5836	9	NIC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	-2118	0	intron_retention	FALSE	canonical	3	120	junction_2	9.93415824315276	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTTCTCTGCCCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	14186547	14172537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14178282_14179727_14179869_14180372_14180593_14181026_14181123_14183199_14183277_14184213
ES.8730.16	chr13	-	4592	16	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	53.5348692183162	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTTCTCTGCCCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	14214186	14172537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194797_14199654_14202356_14203860_14203992_14214122
ES.8730.17	chr13	-	3547	15	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_4	56.9205048954331	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTTCTCTGCCCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	14214169	14172537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178114_14178282_14179727_14179869_14180372_14180458_14180527_14180593_14181026_14181123_14183199_14185227_14189319_14189409_14194286_14194473_14202304_14202368_14203860_14203992_14214122
ES.8730.18	chr13	-	3323	13	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	11809	-1	intron_retention	FALSE	canonical	1	3	junction_12	36.6749990532455	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGATTTCTCTGCCCTT	NA	False	NA	-7	True	AATAAA	-12	NA	14202355	14172538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14185227_14189319_14189409_14194286_14194473_14202304
ES.8730.19	chr13	-	1695	16	NIC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	2	-2	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	32.9265850036107	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGATTTCTCTGCCCT	NA	False	NA	-8	True	AATAAA	-11	NA	14214162	14172539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14203860_14203992_14214122
ES.8730.2	chr13	-	1861	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	-11	-6	-11	3	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCCTTTCTGTTTT	NA	False	NA	1	True	AATAAA	-20	NA	14214234	14172530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ES.8730.20	chr13	-	2288	13	FSM	ENSMUSG00000039233.13	ENSMUST00000159239.8	1855	13	6	-439	2	439	multi-exon	FALSE	canonical	3	105	junction_7	16.4519502390041	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCTACGCGAATTGC	NA	False	NA	NA	False	NA	NA	NA	14214200	14177209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ES.8730.21	chr13	-	3229	11	NNC	ENSMUSG00000039233.13	novel	1855	13	NA	NA	13162	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	40.3758591239865	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGAGAAAACATA	NA	False	NA	NA	False	NA	NA	NA	14201002	14177646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194797_14199654
ES.8730.22	chr13	-	4983	1	NIC	ENSMUSG00000039233.13	novel	1626	15	NA	NA	-8639	851	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCAGCTCTAGCTG	NA	False	NA	NA	False	NA	NA	NA	14193068	14188085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14188100_14193100
ES.8730.23	chr13	-	1663	4	ISM	ENSMUSG00000039233.13	ENSMUST00000159893.8	1626	15	-22	15593	-5	810	5prime_fragment	FALSE	canonical	3	15	junction_2	65.1204013091648	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	14214186	14188126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_14189409_14194286_14194473_14203860_14203992_14214122
ES.8730.24	chr13	-	1966	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	-20	-1037	1	1037	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCTTTGGTCATGGT	NA	False	NA	0	True	NA	NA	NA	14214222	14192822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
ES.8730.25	chr13	-	4916	4	NNC	ENSMUSG00000039233.13	novel	909	4	NA	NA	1	1035	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.8376019569485	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCCTTTGGTCATG	NA	False	NA	-2	True	NA	NA	NA	14214222	14192824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14194797_14199654_14202368_14203860_14203992_14214122
ES.8730.3	chr13	-	4244	15	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	12155	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	53.7943931529474	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGCCCTTTCTGTTT	NA	False	NA	0	True	AATAAA	-19	NA	14202009	14172531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178114_14178282_14179727_14179869_14180372_14180458_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194797_14199654
ES.8730.5	chr13	-	4553	11	NIC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-6439	2	intron_retention	FALSE	canonical	3	97	junction_4	14.3	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGCCCTTTCTGTTT	NA	False	NA	0	True	AATAAA	-19	NA	14190868	14172531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14185227_14189319
ES.8730.6	chr13	-	1838	17	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	35.2861073937038	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGCCCTTTCTGTT	NA	False	NA	-1	True	AATAAA	-18	NA	14214200	14172532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178114_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ES.8730.7	chr13	-	1607	15	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	45.5681257199882	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGCCCTTTCTGTT	NA	False	NA	-1	True	AATAAA	-18	NA	14214212	14172532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184272_14189319_14189409_14194286_14194473_14203860_14203992_14214122
ES.8730.8	chr13	-	2549	15	NNC	ENSMUSG00000039233.13	novel	1853	17	NA	NA	-5	1	intron_retention	FALSE	canonical	0	0	junction_4	45.9565011723042	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTCTGCCCTTTCTGTT	NA	False	NA	-1	True	AATAAA	-18	NA	14214186	14172532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178114_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14185227_14189319_14189409_14194286_14194473_14203860_14203992_14214122
ES.8730.9	chr13	-	4794	17	NNC	ENSMUSG00000039233.13	novel	1844	17	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	35.6106879145854	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTCTGCCCTTTCTGT	NA	False	NA	-2	True	AATAAA	-17	NA	14214218	14172533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194797_14199654_14202368_14203860_14203992_14214122
ES.8731.1	chr13	+	3047	1	Intergenic	novelGene_7181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGAGAAGATGACTGT	NA	False	NA	NA	False	NA	NA	NA	14219049	14222096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_14219000_14222100
ES.8732.1	chr13	-	182	1	Intergenic	novelGene_7182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATGTTGGCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	14219714	14219532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14219500_14219700
ES.8733.1	chr13	+	4334	2	Antisense	novelGene_ENSMUSG00000021302.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAAAAACAAAAAGAG	NA	False	NA	NA	False	AAAACA	-7	NA	14225217	14230245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_14229041_14229734
ES.8733.2	chr13	+	182	1	Antisense	novelGene_ENSMUSG00000021302.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	14228005	14228187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_14228000_14228200
ES.8734.1	chr13	+	193	1	Intergenic	novelGene_7183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTATCATTCCTTTAA	NA	False	NA	NA	False	AAGAAA	-8	NA	14231006	14231199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_14231000_14231200
ES.8735.1	chr13	-	5032	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	79	-867	0	867	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTGGGTTTAATGAATA	NA	False	NA	NA	False	AATAAA	-22	NA	14237994	14224376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.11	chr13	-	3200	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	57	987	-13	199	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTTTTCTTTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	14238016	14226230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.12	chr13	-	4466	3	NNC	ENSMUSG00000021302.11	novel	762	3	NA	NA	2153	199	intron_retention	FALSE	canonical	1	1	junction_2	138.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTTTTCTTTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	14231894	14226230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14229041_14229734_14231040_14231543
ES.8735.13	chr13	-	3337	5	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	-19	198	intron_retention	FALSE	canonical	3	8	junction_4	116.164484675825	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238022	14226231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
ES.8735.14	chr13	-	3362	6	NIC	ENSMUSG00000021302.11	novel	652	5	NA	NA	0	198	intron_retention	FALSE	canonical	0	0	junction_4	117.983727691576	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14237995	14226231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14235547_14235593_14237790
ES.8735.15	chr13	-	3103	3	FSM	ENSMUSG00000021302.11	ENSMUST00000222687.2	762	3	-19	-2322	-10	198	multi-exon	FALSE	canonical	2	3	junction_2	137.5	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238013	14226231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14237790
ES.8735.16	chr13	-	3326	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-2	197	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTTTTTTCTTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	14238005	14226232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
ES.8735.17	chr13	-	5439	5	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	72	197	intron_retention	FALSE	canonical	2	12	junction_1	115.037765538105	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTTTTTTCTTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	14237886	14226232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14233903
ES.8735.18	chr13	-	3597	6	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	1	196	intron_retention	FALSE	canonical	3	12	junction_3	119.201342274322	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATGTTTTTTTCTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	14237993	14226233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234039_14237790
ES.8735.19	chr13	-	1653	5	NIC	ENSMUSG00000021302.11	novel	2209	6	NA	NA	6	196	intron_retention	FALSE	canonical	2	12	junction_1	100.568384694197	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAATGTTTTTTTCTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	14237988	14226233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.2	chr13	-	5450	6	NIC	ENSMUSG00000021302.11	novel	804	5	NA	NA	8	866	intron_retention	FALSE	canonical	3	12	junction_3	118.416890687098	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTTGGGTTTAATGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	14237986	14224377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234043_14237790
ES.8735.20	chr13	-	3370	6	NIC	ENSMUSG00000021302.11	novel	804	5	NA	NA	0	-36	intron_retention	FALSE	canonical	3	12	junction_3	118.416890687098	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTTGTGCTACAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	14237994	14226465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234043_14237790
ES.8735.21	chr13	-	2937	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	85	1222	6	-36	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTTGTGCTACAATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	14237988	14226465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.22	chr13	-	1462	8	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	1	-37	intron_retention	FALSE	canonical	0	0	junction_6	110.210744318625	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTTGTGCTACAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	14237993	14226466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226716_14226862_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14235547_14235593_14237790
ES.8735.23	chr13	-	1598	9	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	6	-37	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	106.083693374618	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTTGTGCTACAATAA	NA	False	NA	NA	False	AATAAA	-15	NA	14237988	14226466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226716_14226862_14226979_14228494_14228627_14228724_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234039_14237790
ES.8735.24	chr13	-	1233	6	NNC	ENSMUSG00000021302.11	novel	2209	6	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_2	116.568263262348	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGAGTAGCTGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	14237987	14226509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14226716_14226862_14226983_14228494_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.25	chr13	-	4960	5	ISM	ENSMUSG00000021302.11	ENSMUST00000222164.2	1340	7	6	276	2	-276	intron_retention	FALSE	canonical	2	12	junction_1	115.037765538105	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTAATAGTGAATTAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	14237992	14226817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14233903
ES.8735.26	chr13	-	2434	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	42	1768	-28	-470	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATATTTTTTTTAA	NA	False	NA	NA	False	AAGAAA	-4	NA	14238031	14227011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.27	chr13	-	2148	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	69	2027	-1	-729	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATTGTTTTTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	14238004	14227270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.28	chr13	-	1848	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	69	2327	-1	983	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTATCTGCTTTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14238004	14227570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.29	chr13	-	1867	5	ISM	ENSMUSG00000021302.11	ENSMUST00000222164.2	1340	7	107	1029	67	983	5prime_fragment	FALSE	canonical	3	8	junction_4	116.164484675825	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTATCTGCTTTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	14237891	14227570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
ES.8735.3	chr13	-	3513	5	NIC	ENSMUSG00000021302.11	novel	2209	6	NA	NA	-1	862	intron_retention	FALSE	canonical	2	12	junction_1	100.568384694197	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAGACTTGGGTTTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	14237996	14224381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.30	chr13	-	1201	5	FSM	ENSMUSG00000021302.11	ENSMUST00000221338.2	652	5	-5	-544	-2	295	multi-exon	FALSE	canonical	0	0	junction_3	126.178445068879	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTAGCTTCTTTCAGT	NA	False	NA	0	True	AATAAA	-24	NA	14238000	14228258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14235547_14235593_14237790
ES.8735.31	chr13	-	1156	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	73	3015	-2	295	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTAGCTTCTTTCAGT	NA	False	NA	0	True	AATAAA	-24	NA	14238000	14228258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.32	chr13	-	1298	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-2	293	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGTAGCTTCTTTCA	NA	False	NA	-2	True	AATAAA	-22	NA	14238005	14228260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
ES.8735.33	chr13	-	1291	5	ISM	ENSMUSG00000021302.11	ENSMUST00000222164.2	1340	7	-7	1719	-2	293	5prime_fragment	FALSE	canonical	3	8	junction_4	116.164484675825	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAGTAGCTTCTTTCA	NA	False	NA	-2	True	AATAAA	-22	NA	14238005	14228260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234036_14237790
ES.8735.35	chr13	-	1583	6	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-10	286	intron_retention	FALSE	canonical	3	12	junction_3	119.201342274322	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATTAGACTCAGTAGCT	NA	False	NA	-9	True	AATAAA	-15	NA	14238013	14228267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234039_14237790
ES.8735.36	chr13	-	1119	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-1	120	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGAGGATGTAGGTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	14237999	14228433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
ES.8735.37	chr13	-	1158	6	NIC	ENSMUSG00000021302.11	novel	652	5	NA	NA	1	120	intron_retention	FALSE	canonical	0	0	junction_4	117.983727691576	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGAGGATGTAGGTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	14237993	14228433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14235547_14235593_14237790
ES.8735.38	chr13	-	994	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	60	3190	-10	120	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGAGGATGTAGGTTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	14238013	14228433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.4	chr13	-	4196	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	60	-12	-10	12	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCAACTCCGCTCCGT	NA	False	NA	2	True	TATAAA	-13	NA	14238013	14225231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.40	chr13	-	690	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	64	3490	-6	69	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGACAGGTGGTTTGTTT	NA	False	NA	NA	False	TATAAA	-14	NA	14238009	14228733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.41	chr13	-	1922	1	NIC	ENSMUSG00000021302.11	novel	4244	4	NA	NA	-7	-2404	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAACAATCTTC	NA	False	NA	NA	False	NA	NA	NA	14238010	14236088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14236100_14238000
ES.8735.5	chr13	-	2506	6	FSM	ENSMUSG00000021302.11	ENSMUST00000222747.2	2209	6	-17	-280	6	10	multi-exon	FALSE	canonical	2	4	junction_1	113.73372411031	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTCAACTCCGCTCC	NA	False	NA	0	True	TATAAA	-11	NA	14237988	14225233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14226716_14226862_14226979_14228494_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.6	chr13	-	4634	7	NIC	ENSMUSG00000021302.11	novel	804	5	NA	NA	1	-2	intron_retention	FALSE	canonical	0	0	junction_5	116.858889263932	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAATGTTAATTTGCT	NA	False	NA	-12	True	NA	NA	NA	14237993	14225245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234043_14235547_14235593_14237790
ES.8735.7	chr13	-	4322	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCAATGTTAATTTGC	NA	False	NA	-13	True	NA	NA	NA	14238015	14225246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
ES.8735.8	chr13	-	2351	5	NIC	ENSMUSG00000021302.11	novel	2209	6	NA	NA	-1	-40	intron_retention	FALSE	canonical	1	1	junction_1	105.117493786715	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATACAAAAATAA	NA	False	NA	-50	True	NA	NA	NA	14237999	14225283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14226716_14228494_14229041_14229734_14229806_14232380_14232474_14237790
ES.8735.9	chr13	-	4546	6	NIC	ENSMUSG00000021302.11	novel	1340	7	NA	NA	0	-40	intron_retention	FALSE	canonical	3	8	junction_5	120.179865202121	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATACAAAAATAA	NA	False	NA	-50	True	NA	NA	NA	14237995	14225283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233508_14233797_14233903_14234036_14237790
ES.8736.1	chr13	+	5851	24	NIC	ENSMUSG00000039219.19	novel	815	9	NA	NA	268	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.1797782609676	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTTGTAGAAGGTAA	1144	False	NA	10	True	AATAAA	-24	NA	14238084	14373953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238307_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.10	chr13	+	5899	24	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	3	-81	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	19.4567039097617	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTTGTATAGCATGTAC	1446	False	NA	NA	False	ATTAAA	-18	NA	14238386	14374107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367957_14368167_14369914_14370062_14372190
ES.8736.11	chr13	+	8709	22	NIC	ENSMUSG00000039219.19	novel	5844	23	NA	NA	5	2	intron_retention	FALSE	canonical	3	6	junction_16	16.4986084756458	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1448	False	NA	11	True	AATAAA	-25	NA	14238388	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.12	chr13	+	5901	26	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	28.754797860531	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1448	False	NA	11	True	AATAAA	-25	NA	14238388	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14307696_14307784_14310350_14310417_14310752_14310845_14317564_14317704_14319874_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.13	chr13	+	5718	23	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	18.8383730061983	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1451	False	NA	11	True	AATAAA	-25	NA	14238391	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14319870_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.15	chr13	+	7256	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	15	-3	intron_retention	FALSE	canonical	2	6	junction_21	18.2753565723077	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCTTGATTTTGTTTGT	1458	False	NA	1	True	AATAAA	-15	NA	14238398	14373944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14366533_14368167_14369914_14370062_14372190
ES.8736.16	chr13	+	4974	17	ISM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	22	26318	15	3084	5prime_fragment	FALSE	canonical	3	52	junction_14	9.82344135219425	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATATAAGCATTGGAGA	1458	False	NA	NA	False	TATAAA	-14	NA	14238398	14347629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503
ES.8736.17	chr13	+	4523	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	19	401	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	13.4276750581372	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATTTGTACAAGCTA	1462	False	NA	NA	False	ATTAAA	-12	NA	14238402	14372740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.19	chr13	+	5775	24	NIC	ENSMUSG00000039219.19	novel	5783	23	NA	NA	1	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	19.1797782609676	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1700	False	NA	11	True	AATAAA	-25	NA	14238640	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238786_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.2	chr13	+	5807	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-36	2	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	13.4276750581372	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1392	False	NA	11	True	AATAAA	-25	NA	14238332	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.20	chr13	+	5579	23	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	13.7222296576343	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	2405	False	NA	4	True	AATAAA	-18	NA	14239345	14373947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.21	chr13	+	4505	12	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-2847	-4	combination_of_known_junctions	FALSE	canonical	2	3	junction_9	29.8323137243621	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTTGATTTTGTTTG	NA	False	NA	0	True	AATAAA	-14	NA	14335927	14373943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14366533_14366687_14367950_14368167_14369914_14370062_14372190
ES.8736.22	chr13	+	3762	8	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	5770	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	31.2200877249091	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	NA	False	NA	4	True	AATAAA	-18	NA	14344544	14373947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365794_14367985_14368167_14369914_14370062_14372190
ES.8736.23	chr13	+	1949	2	NNC	ENSMUSG00000039219.19	novel	4828	4	NA	NA	-3533	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGTTTGTAGAAGG	NA	False	NA	7	True	AATAAA	-21	NA	14362228	14373950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14362436_14372208
ES.8736.3	chr13	+	5914	24	FSM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	-43	-7	-35	2	multi-exon	FALSE	canonical	3	31	junction_17	12.735494361632	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1393	False	NA	11	True	AATAAA	-25	NA	14238333	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.4	chr13	+	7219	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-33	0	intron_retention	FALSE	canonical	2	6	junction_21	18.7320172114237	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGTTTGTAGAAGGTA	1395	False	NA	9	True	AATAAA	-23	NA	14238335	14373952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14366533_14368167_14369914_14370062_14372190
ES.8736.5	chr13	+	5943	25	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_22	22.618208004467	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGTTTGTAGAAGG	1398	False	NA	7	True	AATAAA	-21	NA	14238338	14373950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14366533_14366687_14367957_14368167_14369914_14370062_14372190
ES.8736.6	chr13	+	5639	23	FSM	ENSMUSG00000039219.19	ENSMUST00000039538.15	5844	23	-30	235	-22	1	multi-exon	FALSE	canonical	3	6	junction_16	16.774390161471	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTTTGTAGAAGGTAA	1406	False	NA	10	True	AATAAA	-24	NA	14238346	14373953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.7	chr13	+	4662	24	NNC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	-7	400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	18.5627225693632	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATTTGTACAAGCT	1421	False	NA	NA	False	ATTAAA	-11	NA	14238361	14372739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365736_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.8	chr13	+	5499	23	NIC	ENSMUSG00000039219.19	novel	5783	23	NA	NA	-2	-1	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	21.5251150638596	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTTGTAGAAGGT	1426	False	NA	8	True	AATAAA	-22	NA	14238366	14373951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238500_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ES.8736.9	chr13	+	7970	23	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	3	2	intron_retention	FALSE	canonical	3	31	junction_17	13.0215968095727	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTGTAGAAGGTAAA	1446	False	NA	11	True	AATAAA	-25	NA	14238386	14373954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14368167_14369914_14370062_14372190
ES.8737.1	chr13	-	173	1	Intergenic	novelGene_7184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGCTTCAATTTT	NA	False	NA	-4	True	NA	NA	NA	14246736	14246563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14246600_14246700
ES.8738.1	chr13	-	8943	1	Intergenic	novelGene_7185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAAAAGTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14260612	14251669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14251700_14260600
ES.8738.2	chr13	-	3306	1	Intergenic	novelGene_7186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACCAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14260611	14257305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14257300_14260600
ES.8739.1	chr13	-	179	1	Intergenic	novelGene_7187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTCTTATCTTAGTA	NA	False	NA	NA	False	NA	NA	NA	14435642	14435463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14435500_14435600
ES.874.1	chr1	-	3298	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	334	0	132	0	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCTCATTCTTTAA	NA	False	NA	1	True	AATAAA	-19	NA	84673608	84347559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
ES.874.10	chr1	-	9515	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	72	-6	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_41	289.006814326147	1690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAGTTTTGTTACTTTA	8539	False	NA	-14	True	AATAAA	-16	NA	84816380	84698915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
ES.874.100	chr1	-	7400	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9524	801	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	84827761	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.101	chr1	-	7519	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-10420	801	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_41	266.688318325849	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	9177	False	NA	-5	True	AATAAA	-18	NA	84828657	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84828333
ES.874.103	chr1	-	7488	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-210	801	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	7677	False	NA	-5	True	AATAAA	-18	NA	84817242	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.105	chr1	-	6604	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	801	combination_of_known_splicesites	FALSE	canonical	3	17	junction_38	251.263798395149	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	7845	False	NA	-5	True	AATAAA	-18	NA	84817074	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816949
ES.874.107	chr1	-	6533	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9460	801	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_38	273.586980016321	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	84827697	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84827643
ES.874.108	chr1	-	7466	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9548	801	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	270.908748968537	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	84827785	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.109	chr1	-	7402	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	316.737446439988	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	7898	False	NA	-5	True	AATAAA	-18	NA	84817021	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.11	chr1	-	9790	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-44	-7	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_43	347.841756416277	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	7843	False	NA	-15	True	AATAAA	-15	NA	84817076	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.110	chr1	-	7527	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	801	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_25	288.508614606155	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	7854	False	NA	-5	True	AATAAA	-18	NA	84817065	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.115	chr1	-	7396	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	800	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7840	False	NA	-6	True	AATAAA	-17	NA	84817079	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.116	chr1	-	7280	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9450	800	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	291.198317847924	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	84827687	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.118	chr1	-	9167	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	800	intron_retention	FALSE	canonical	3	32	junction_40	289.74458472075	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	8463	False	NA	-6	True	AATAAA	-17	NA	84816456	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816331
ES.874.12	chr1	-	9594	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-7	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	291.198317847924	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	NA	False	NA	-15	True	AATAAA	-15	NA	84827733	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.120	chr1	-	8545	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-65	800	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	367.243587954175	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7822	False	NA	-6	True	AATAAA	-17	NA	84817097	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84750837_84750922_84751713_84752701_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.122	chr1	-	7521	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-67	800	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	271.700965464141	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7820	False	NA	-6	True	AATAAA	-17	NA	84817099	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.123	chr1	-	6553	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	223	800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_40	267.963481653751	1683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	8690	False	NA	-6	True	AATAAA	-17	NA	84816229	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84771511_84816185
ES.874.124	chr1	-	7362	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	25	800	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	272.903067727353	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	8492	False	NA	-6	True	AATAAA	-17	NA	84816427	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.125	chr1	-	7341	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9526	800	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	316.096132116844	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	84827763	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.126	chr1	-	7218	39	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34	800	combination_of_known_splicesites	FALSE	canonical	1	1	junction_34	259.596668036016	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7853	False	NA	-6	True	AATAAA	-17	NA	84817066	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.127	chr1	-	7568	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	62	800	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_41	290.602537191692	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	6744	False	NA	-6	True	AATAAA	-17	NA	84818175	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818014
ES.874.128	chr1	-	7367	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	800	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_28	284.14335730402	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7854	False	NA	-6	True	AATAAA	-17	NA	84817065	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.129	chr1	-	7266	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	49	800	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_41	264.427688375359	1683	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	8516	False	NA	-6	True	AATAAA	-17	NA	84816403	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
ES.874.130	chr1	-	7355	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9489	800	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	302.417776594297	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	84827726	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.131	chr1	-	7183	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-5	800	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	248.597706647002	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	7882	False	NA	-6	True	AATAAA	-17	NA	84817037	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
ES.874.133	chr1	-	2949	14	NNC	ENSMUSG00000026219.15	novel	2847	18	NA	NA	5410	800	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_4	326.414174045417	1663	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	84721588	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540
ES.874.135	chr1	-	7407	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186465.7	9590	41	-92	2275	-92	800	multi-exon	FALSE	canonical	3	29	junction_40	239.212613327558	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	6590	False	NA	-6	True	AATAAA	-17	NA	84818329	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ES.874.137	chr1	-	7064	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-691	800	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	273.603410390451	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	84771963	84701184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245
ES.874.138	chr1	-	7261	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9474	799	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	258.943708439484	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	NA	False	NA	-7	True	AATAAA	-16	NA	84827711	84701185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.139	chr1	-	7480	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9473	799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	335.219680783058	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	NA	False	NA	-7	True	AATAAA	-16	NA	84827710	84701185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719903_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.140	chr1	-	7436	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9538	799	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_42	325.880948032022	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	NA	False	NA	-7	True	AATAAA	-16	NA	84827775	84701185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.144	chr1	-	7431	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	799	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_43	327.007655093875	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	NA	False	NA	-7	True	AATAAA	-16	NA	84827713	84701185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.147	chr1	-	7449	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	799	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_40	284.907587356556	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTATAGTTCTG	7840	False	NA	-7	True	AATAAA	-16	NA	84817079	84701185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.148	chr1	-	9030	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	798	intron_retention	FALSE	canonical	3	439	junction_39	203.545587151017	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	7854	False	NA	-8	True	AATAAA	-15	NA	84817065	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.149	chr1	-	7224	42	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	2	798	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_41	264.676586458631	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	6684	False	NA	-8	True	AATAAA	-15	NA	84818235	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84818203
ES.874.15	chr1	-	9733	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	344.846452135248	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	NA	False	NA	-15	True	AATAAA	-15	NA	84827713	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763911_84771254_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.150	chr1	-	7387	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-37	798	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	316.731659102072	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	7850	False	NA	-8	True	AATAAA	-15	NA	84817069	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.151	chr1	-	5302	28	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1852	798	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	317.714502031458	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	5423	False	NA	-8	True	AATAAA	-15	NA	84739757	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584
ES.874.153	chr1	-	7289	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-23	798	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	301.064957847202	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	7864	False	NA	-8	True	AATAAA	-15	NA	84817055	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.154	chr1	-	7188	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	311.079252149168	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	7851	False	NA	-8	True	AATAAA	-15	NA	84817068	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.156	chr1	-	7453	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-53	798	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	238.924381342717	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	8414	False	NA	-8	True	AATAAA	-15	NA	84816505	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.16	chr1	-	9565	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9524	-7	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	288.734649460243	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	NA	False	NA	-15	True	AATAAA	-15	NA	84827761	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.160	chr1	-	7405	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	214	798	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_40	238.445264945647	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTGTTTATAGTTCT	8681	False	NA	-8	True	AATAAA	-15	NA	84816238	84701186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
ES.874.161	chr1	-	6029	21	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	67	797	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	268.717374763896	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTTGTTTATAGTTC	9958	False	NA	-9	True	AATAAA	-14	NA	84732058	84701187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991
ES.874.162	chr1	-	7407	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	797	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_42	302.374837770948	1693	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTTGTTTATAGTTC	NA	False	NA	-9	True	AATAAA	-14	NA	84827733	84701187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.164	chr1	-	6968	38	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-21378	797	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	244.487397743161	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTTTGTTTATAGTTC	NA	False	NA	-9	True	AATAAA	-14	NA	84792650	84701187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543
ES.874.169	chr1	-	7469	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	795	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	292.990421805018	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATTTTTGTTTATAGT	7888	False	NA	-11	True	AATAAA	-12	NA	84817031	84701189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.17	chr1	-	9593	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-7	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	7839	False	NA	-15	True	AATAAA	-15	NA	84817080	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.170	chr1	-	7347	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-38	795	combination_of_known_junctions	FALSE	canonical	3	23	junction_40	239.790782506334	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATTTTTGTTTATAGT	6894	False	NA	-11	True	AATAAA	-12	NA	84818025	84701189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817954
ES.874.171	chr1	-	7481	41	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	18	795	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_40	241.343571231968	1685	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCATTTTTGTTTATAGT	6700	False	NA	-11	True	AATAAA	-12	NA	84818219	84701189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818014
ES.874.172	chr1	-	4246	22	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	42	794	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	359.603018710577	1667	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCATTTTTGTTTATAG	9933	False	NA	-12	True	AATAAA	-11	NA	84732083	84701190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721541_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991
ES.874.175	chr1	-	6806	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-44	213	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTGTCATCCTGTGTTC	7843	False	NA	NA	False	AATACA	-25	NA	84817076	84701771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.176	chr1	-	7051	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-281	2862	-274	213	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTGTCATCCTGTGTTC	7613	False	NA	NA	False	AATACA	-25	NA	84817306	84701771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.177	chr1	-	6791	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	211	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	253.847462809854	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTTGTCATCCTGTGT	7883	False	NA	NA	False	AATACA	-23	NA	84817036	84701773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.178	chr1	-	6593	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9475	211	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	287.163806484919	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCCTTGTCATCCTGTGT	NA	False	NA	NA	False	AATACA	-23	NA	84827712	84701773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.179	chr1	-	6968	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	210	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTTGTCATCCTGTG	7819	False	NA	NA	False	AATACA	-22	NA	84817100	84701774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.18	chr1	-	9601	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	277.331842067636	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	7840	False	NA	-15	True	AATAAA	-15	NA	84817079	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.180	chr1	-	6836	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-15	210	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	280.813799518471	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTTGTCATCCTGTG	8452	False	NA	NA	False	AATACA	-22	NA	84816467	84701774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.181	chr1	-	5837	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-210	206	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	326.358265241216	1678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGGCCTTGTCATCC	NA	False	NA	NA	False	AATACA	-18	NA	84771482	84701778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732198_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392
ES.874.182	chr1	-	6775	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9494	206	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGGCCTTGTCATCC	NA	False	NA	NA	False	AATACA	-18	NA	84827731	84701778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.183	chr1	-	7008	42	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	27	205	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_41	290.602537191692	1681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCCAGGCCTTGTCATC	6709	False	NA	NA	False	AATACA	-17	NA	84818210	84701779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818014
ES.874.184	chr1	-	6674	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	204	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1681	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCCAGGCCTTGTCAT	7894	False	NA	NA	False	AATACA	-16	NA	84817025	84701780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.185	chr1	-	4739	16	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	2045	-102	2045	102	intron_retention	FALSE	canonical	3	994	junction_9	125.089301434349	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCCGAGTTCATT	NA	False	NA	37	True	AGTAAA	-26	NA	84724953	84701882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733
ES.874.186	chr1	-	6714	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-55	2973	-48	102	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTCCGAGTTCATT	7839	False	NA	37	True	AGTAAA	-26	NA	84817080	84701882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.187	chr1	-	6666	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-50	99	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_40	268.217150831188	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTTCCGAGTTC	6882	False	NA	34	True	AGTAAA	-23	NA	84818037	84701885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817954
ES.874.188	chr1	-	6744	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	99	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	291.531176937751	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTTCCGAGTTC	7851	False	NA	34	True	AGTAAA	-23	NA	84817068	84701885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.189	chr1	-	6695	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9485	99	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	366.172707631329	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTTCCGAGTTC	NA	False	NA	34	True	AGTAAA	-23	NA	84827722	84701885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.190	chr1	-	6096	39	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	-708	97	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	328.80745761437	1678	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATTTTCTTTTCCGAGT	NA	False	NA	32	True	AGTAAA	-21	NA	84771980	84701887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84771306_84771392
ES.874.191	chr1	-	6661	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9539	77	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	303.604923173192	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTGCGTGCCTTCCA	NA	False	NA	12	True	ATTAAA	-34	NA	84827776	84701907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.192	chr1	-	6623	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	315.656316268184	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATAGTAAATGGGTTCT	7898	False	NA	0	True	ATTAAA	-22	NA	84817021	84701919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84816949
ES.874.193	chr1	-	6831	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-50	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	329.792039193863	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGTATAGTAAATGGGT	7837	False	NA	-3	True	ATTAAA	-19	NA	84817082	84701922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811126_84816744_84816835_84816949
ES.874.194	chr1	-	6771	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	60	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	292.990421805018	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGTATAGTAAATGG	7851	False	NA	-5	True	ATTAAA	-17	NA	84817068	84701924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.195	chr1	-	5050	34	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1956	59	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_4	286.536276323295	1674	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTAGTATAGTAAATG	4146	False	NA	-6	True	ATTAAA	-16	NA	84746392	84701925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303
ES.874.196	chr1	-	6700	42	NIC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	0	59	combination_of_known_junctions	FALSE	canonical	3	29	junction_41	288.938527948036	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTAGTATAGTAAATG	6682	False	NA	-6	True	ATTAAA	-16	NA	84818237	84701925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.197	chr1	-	6682	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-147	58	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTCTAGTATAGTAAAT	7740	False	NA	-7	True	ATTAAA	-15	NA	84817179	84701926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.198	chr1	-	6777	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	58	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	312.065920742539	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTCTAGTATAGTAAAT	NA	False	NA	-7	True	ATTAAA	-15	NA	84827713	84701926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.199	chr1	-	6676	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-13	58	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_40	267.454191171124	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTCTAGTATAGTAAAT	8454	False	NA	-7	True	ATTAAA	-15	NA	84816465	84701926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.2	chr1	-	2908	13	NNC	ENSMUSG00000036766.13	novel	3632	13	NA	NA	-7509	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	4.85340659285368	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTTGTCTCATTCTTT	NA	False	NA	-1	True	AATAAA	-17	NA	84609071	84347561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84609024
ES.874.20	chr1	-	9640	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9497	-7	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	NA	False	NA	-15	True	AATAAA	-15	NA	84827734	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.200	chr1	-	6581	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-55	58	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	301.064957847202	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTCTAGTATAGTAAAT	7832	False	NA	-7	True	ATTAAA	-15	NA	84817087	84701926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.201	chr1	-	6717	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9540	57	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	294.850421348963	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACTCTAGTATAGTAAA	NA	False	NA	-8	True	ATTAAA	-14	NA	84827777	84701927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.203	chr1	-	6651	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	56	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_42	307.416795520024	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACTCTAGTATAGTAA	6890	False	NA	-9	True	ATTAAA	-13	NA	84818029	84701928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84817954
ES.874.205	chr1	-	6731	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	312.701685065736	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAACTCTAGTATAGTAA	7883	False	NA	-9	True	ATTAAA	-13	NA	84817036	84701928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84816949
ES.874.207	chr1	-	5552	36	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-221	-16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	307.319794882352	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTCTGCAGTTTGTTT	7666	False	NA	1	True	AATAAA	-43	NA	84817253	84702000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84792543_84792691_84816949
ES.874.209	chr1	-	6768	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-229	3093	-222	-18	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTAAGTCTGCAGTTTGT	7665	False	NA	-1	True	AATAAA	-41	NA	84817254	84702002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.21	chr1	-	9755	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-130	7	-123	-7	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTAGTTTTGTTACTTT	7764	False	NA	-15	True	AATAAA	-15	NA	84817155	84698916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.210	chr1	-	6896	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-228	-22	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGCTAAGTCTGCAGT	7659	False	NA	-5	True	AATAAA	-37	NA	84817260	84702006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.211	chr1	-	6569	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	-22	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_28	252.519869267747	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTAGCTAAGTCTGCAGT	7845	False	NA	-5	True	AATAAA	-37	NA	84817074	84702006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.212	chr1	-	6476	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-34	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	258.943708439484	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTATCCATCTAGC	NA	False	NA	-17	True	AATAAA	-25	NA	84827759	84702018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.213	chr1	-	6693	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-40	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	324.80418660662	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827713	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84822070_84822113_84827643
ES.874.214	chr1	-	6661	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-40	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_41	301.609925720752	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7851	False	NA	-23	True	AATAAA	-19	NA	84817068	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84816949
ES.874.215	chr1	-	6472	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-116	-40	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	267.718380895604	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7771	False	NA	-23	True	AATAAA	-19	NA	84817148	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.216	chr1	-	6535	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9545	-40	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	291.198317847924	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827782	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.217	chr1	-	6513	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-70	-40	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	242.994257905408	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7817	False	NA	-23	True	AATAAA	-19	NA	84817102	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.218	chr1	-	6482	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	277.331842067636	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7851	False	NA	-23	True	AATAAA	-19	NA	84817068	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.219	chr1	-	8232	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9473	-40	intron_retention	FALSE	canonical	3	100	junction_38	233.660058318031	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827710	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.220	chr1	-	6557	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-40	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827759	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.222	chr1	-	6431	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-2	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	283.959106871042	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7908	False	NA	-23	True	AATAAA	-19	NA	84817011	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.223	chr1	-	8133	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	-40	intron_retention	FALSE	canonical	3	104	junction_16	244.870954489094	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7898	False	NA	-23	True	AATAAA	-19	NA	84817021	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.225	chr1	-	6382	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-195	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	291.429623513182	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8272	False	NA	-23	True	AATAAA	-19	NA	84816647	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816622
ES.874.226	chr1	-	3598	23	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2683	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.757292459181	1661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	9958	False	NA	-23	True	AATAAA	-19	NA	84735222	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703123_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137
ES.874.227	chr1	-	6844	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-262	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	324.256449277357	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7625	False	NA	-23	True	AATAAA	-19	NA	84817294	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714694_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84792895_84793033_84816949
ES.874.229	chr1	-	6541	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-5	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	280.731526551615	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7882	False	NA	-23	True	AATAAA	-19	NA	84817037	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.23	chr1	-	9595	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	-8	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	249.300439981561	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTAGTTTTGTTACTT	7845	False	NA	-16	True	AATAAA	-14	NA	84817074	84698917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.230	chr1	-	6941	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	201	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	341.768881894904	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8668	False	NA	-23	True	AATAAA	-19	NA	84816251	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84792895_84793033_84811045_84811144_84816112
ES.874.231	chr1	-	6609	39	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	31	-40	intron_retention	FALSE	canonical	1	3	junction_8	284.390416997089	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8498	False	NA	-23	True	AATAAA	-19	NA	84816421	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709849_84714702_84714802_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.232	chr1	-	6408	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34	-40	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	253.998177736038	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7853	False	NA	-23	True	AATAAA	-19	NA	84817066	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.233	chr1	-	6797	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	339.053129077848	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827733	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84811045_84811144_84822070_84822113_84827643
ES.874.234	chr1	-	6429	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-40	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	288.734649460243	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827733	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.235	chr1	-	6461	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	8	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_30	282.952697101201	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8475	False	NA	-23	True	AATAAA	-19	NA	84816444	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.236	chr1	-	6682	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	-40	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	271.700965464141	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7819	False	NA	-23	True	AATAAA	-19	NA	84817100	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.237	chr1	-	6696	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-97	-40	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_28	305.519678002316	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7790	False	NA	-23	True	AATAAA	-19	NA	84817129	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.238	chr1	-	6581	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	200	-40	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_40	238.445264945647	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8667	False	NA	-23	True	AATAAA	-19	NA	84816252	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
ES.874.239	chr1	-	6836	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-174	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	351.160052353408	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7713	False	NA	-23	True	AATAAA	-19	NA	84817206	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.240	chr1	-	6413	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	271.010454902881	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7854	False	NA	-23	True	AATAAA	-19	NA	84817065	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84816949
ES.874.241	chr1	-	6354	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	25	-40	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_41	298.562482935378	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8492	False	NA	-23	True	AATAAA	-19	NA	84816427	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816331
ES.874.242	chr1	-	6513	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	250	-40	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_40	241.636483172554	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7182	False	NA	-23	True	AATAAA	-19	NA	84817737	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817665
ES.874.243	chr1	-	6481	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-41	-40	combination_of_known_junctions	FALSE	canonical	3	22	junction_35	254.786424850243	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7846	False	NA	-23	True	AATAAA	-19	NA	84817073	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.245	chr1	-	6427	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9473	-40	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	301.505691137493	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827710	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.246	chr1	-	6372	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	327.594637138606	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7854	False	NA	-23	True	AATAAA	-19	NA	84817065	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728219_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.247	chr1	-	6567	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186465.7	9590	41	-92	3115	-92	-40	multi-exon	FALSE	canonical	3	29	junction_40	239.212613327558	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6590	False	NA	-23	True	AATAAA	-19	NA	84818329	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ES.874.248	chr1	-	6591	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9475	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	341.205022443792	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827712	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728219_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84827643
ES.874.249	chr1	-	6375	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	287.302900391674	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7854	False	NA	-23	True	AATAAA	-19	NA	84817065	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
ES.874.250	chr1	-	6471	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-21337	-40	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_28	292.970688593586	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84792609	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543
ES.874.251	chr1	-	6144	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	255.014545237225	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7854	False	NA	-23	True	AATAAA	-19	NA	84817065	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84721673_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.252	chr1	-	6650	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9462	-40	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	334.681948725534	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827699	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.253	chr1	-	5868	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-147	-40	combination_of_known_splicesites	FALSE	canonical	3	17	junction_38	251.263798395149	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7740	False	NA	-23	True	AATAAA	-19	NA	84817179	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816949
ES.874.254	chr1	-	3910	8	NIC	ENSMUSG00000026219.15	novel	2847	18	NA	NA	-5451	-40	intron_retention	FALSE	canonical	3	1109	junction_6	131.683448512882	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84714946	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84708418_84709343_84709499_84709733_84709849_84714702
ES.874.255	chr1	-	6714	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9477	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	323.686318472746	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827714	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84786677_84786754_84792543_84792691_84827643
ES.874.258	chr1	-	6394	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-37	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	342.646062833064	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7850	False	NA	-23	True	AATAAA	-19	NA	84817069	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721536_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.260	chr1	-	5925	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-74	-40	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	313.336456036857	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7813	False	NA	-23	True	AATAAA	-19	NA	84817106	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771960_84772046_84792543_84792691_84816949
ES.874.261	chr1	-	6628	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9503	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	350.623286478654	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827740	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.262	chr1	-	6373	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9464	-40	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	315.024121741354	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827701	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.263	chr1	-	6649	41	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	21	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	306.487842336364	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6703	False	NA	-23	True	AATAAA	-19	NA	84818216	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732203_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818014
ES.874.264	chr1	-	6364	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_39	241.829551310249	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827713	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84827643
ES.874.265	chr1	-	8327	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	-40	intron_retention	FALSE	canonical	3	154	junction_38	264.307165056114	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7845	False	NA	-23	True	AATAAA	-19	NA	84817074	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.266	chr1	-	6537	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	278.653974491662	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7886	False	NA	-23	True	AATAAA	-19	NA	84817033	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.267	chr1	-	6571	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-44	-40	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	291.903344205366	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7843	False	NA	-23	True	AATAAA	-19	NA	84817076	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.268	chr1	-	6506	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-32	-40	combination_of_known_junctions	FALSE	canonical	3	23	junction_40	239.790782506334	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6900	False	NA	-23	True	AATAAA	-19	NA	84818019	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817954
ES.874.270	chr1	-	5670	39	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-40	combination_of_known_splicesites	FALSE	canonical	3	17	junction_37	293.750558436435	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7854	False	NA	-23	True	AATAAA	-19	NA	84817065	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84792543_84792691_84816949
ES.874.271	chr1	-	6747	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-238	-40	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7649	False	NA	-23	True	AATAAA	-19	NA	84817270	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.273	chr1	-	6596	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-78	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	283.558543338056	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7809	False	NA	-23	True	AATAAA	-19	NA	84817110	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.274	chr1	-	6588	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	232	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	363.165203319156	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8699	False	NA	-23	True	AATAAA	-19	NA	84816220	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816112
ES.874.275	chr1	-	5358	38	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1834	-40	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	278.649133614279	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	2189	False	NA	-23	True	AATAAA	-19	NA	84763853	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811
ES.874.28	chr1	-	9798	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	215	-9	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_41	288.34095588585	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	8682	False	NA	-17	True	AATAAA	-13	NA	84816237	84698918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816112
ES.874.280	chr1	-	6726	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-103	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	304.8309212356	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7784	False	NA	-23	True	AATAAA	-19	NA	84817135	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.281	chr1	-	6549	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9529	-40	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	267.46377207951	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827766	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.282	chr1	-	6447	41	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	-9449	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	366.375487034818	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827686	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709341_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.283	chr1	-	6513	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	34	-40	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	272.903067727353	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8501	False	NA	-23	True	AATAAA	-19	NA	84816418	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.284	chr1	-	6433	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	-40	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	313.111632449195	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7819	False	NA	-23	True	AATAAA	-19	NA	84817100	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.285	chr1	-	6468	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-40	-40	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	276.158124993635	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7847	False	NA	-23	True	AATAAA	-19	NA	84817072	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.286	chr1	-	6269	39	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-40	combination_of_known_splicesites	FALSE	canonical	0	0	junction_36	257.081571121942	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7899	False	NA	-23	True	AATAAA	-19	NA	84817020	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84771245_84772049_84792543_84792691_84816949
ES.874.287	chr1	-	6697	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-39	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	330.41556946145	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7848	False	NA	-23	True	AATAAA	-19	NA	84817071	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727064_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741226_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.288	chr1	-	5947	26	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	-845	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	325.452974175994	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6430	False	NA	-23	True	AATAAA	-19	NA	84738750	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735135_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731
ES.874.29	chr1	-	5372	15	NNC	ENSMUSG00000026219.15	novel	2847	18	NA	NA	4577	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	330.949808143477	1670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	NA	False	NA	-17	True	AATAAA	-13	NA	84722421	84698918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719967_84720060_84720814_84720943_84721540_84721741_84722398
ES.874.290	chr1	-	6513	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-5	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.973182572971	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7882	False	NA	-23	True	AATAAA	-19	NA	84817037	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705855_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.291	chr1	-	6306	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-40	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	323.388823347004	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827733	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.293	chr1	-	7014	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-108	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	342.345531521806	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8359	False	NA	-23	True	AATAAA	-19	NA	84816560	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84811045_84811144_84812547_84812668_84816331
ES.874.294	chr1	-	6519	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	157	-40	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_41	266.772926231537	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7089	False	NA	-23	True	AATAAA	-19	NA	84817830	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84817665
ES.874.295	chr1	-	6580	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	213	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	304.170836044483	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8680	False	NA	-23	True	AATAAA	-19	NA	84816239	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
ES.874.297	chr1	-	6461	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-2	-40	combination_of_known_junctions	FALSE	canonical	3	23	junction_40	273.645738136007	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6930	False	NA	-23	True	AATAAA	-19	NA	84817989	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817954
ES.874.298	chr1	-	6787	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-40	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	312.713880549673	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7840	False	NA	-23	True	AATAAA	-19	NA	84817079	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.299	chr1	-	5957	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-40	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	302.880049298462	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7889	False	NA	-23	True	AATAAA	-19	NA	84817030	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771960_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.3	chr1	-	6766	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-123	193801	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.143736150736	1706	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTAGCTTGGGCCAGG	7764	False	NA	NA	False	NA	NA	NA	84817155	84505108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84505140_84561456_84561560_84702024_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.300	chr1	-	6534	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	56	-40	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_40	241.441147073153	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6988	False	NA	-23	True	AATAAA	-19	NA	84817931	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84817838
ES.874.301	chr1	-	10310	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-40	intron_retention	FALSE	canonical	3	100	junction_39	288.2417829597	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827759	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.302	chr1	-	5411	33	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	-40	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_30	272.633881603952	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7883	False	NA	-23	True	AATAAA	-19	NA	84817036	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741170_84771524_84772049_84792543_84792691_84816949
ES.874.304	chr1	-	6430	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9682	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	321.904984678706	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	9915	False	NA	-23	True	AATAAA	-19	NA	84827919	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721648_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827792
ES.874.306	chr1	-	6650	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-50	-40	combination_of_known_junctions	FALSE	canonical	3	23	junction_41	289.389350722723	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6882	False	NA	-23	True	AATAAA	-19	NA	84818037	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84817954
ES.874.307	chr1	-	5168	33	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1926	-40	intron_retention	FALSE	canonical	0	0	junction_9	257.689885615322	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	4176	False	NA	-23	True	AATAAA	-19	NA	84746362	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303
ES.874.309	chr1	-	6417	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-30	-40	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_41	265.176104595687	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6902	False	NA	-23	True	AATAAA	-19	NA	84818017	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84817954
ES.874.31	chr1	-	9840	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-9	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	338.47010154102	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	NA	False	NA	-17	True	AATAAA	-13	NA	84827759	84698918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.310	chr1	-	6515	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-2	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	323.112116624086	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7908	False	NA	-23	True	AATAAA	-19	NA	84817011	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.311	chr1	-	6455	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	239	-40	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_41	264.014139383045	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	8706	False	NA	-23	True	AATAAA	-19	NA	84816213	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816112
ES.874.315	chr1	-	6657	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-40	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	283.778673466796	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827733	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.316	chr1	-	6608	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-66	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	291.116504813794	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	7821	False	NA	-23	True	AATAAA	-19	NA	84817098	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.317	chr1	-	6617	42	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-5	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	277.812640419187	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	6677	False	NA	-23	True	AATAAA	-19	NA	84818242	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84818203
ES.874.318	chr1	-	6561	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-18719	-40	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_40	241.832064664717	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	3648	False	NA	-23	True	AATAAA	-19	NA	84836956	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84836836
ES.874.32	chr1	-	9550	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	275.201923595646	1692	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	7889	False	NA	-17	True	AATAAA	-13	NA	84817030	84698918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.320	chr1	-	6522	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-40	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_42	297.843983569843	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84827713	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84811045_84811144_84827643
ES.874.322	chr1	-	11972	33	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-7285	-40	intron_retention	FALSE	canonical	3	784	junction_29	180.429078431804	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGCTGTGTGTATCCA	NA	False	NA	-23	True	AATAAA	-19	NA	84751721	84702024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303
ES.874.323	chr1	-	6498	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-38	-41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	357.230716970689	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7849	False	NA	-24	True	AATAAA	-18	NA	84817070	84702025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728084_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.325	chr1	-	6358	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9492	-41	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	287.163806484919	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	NA	False	NA	-24	True	AATAAA	-18	NA	84827729	84702025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.326	chr1	-	7066	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-280	-41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	317.733551859611	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGGCTGTGTGTATCC	7607	False	NA	-24	True	AATAAA	-18	NA	84817312	84702025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84792895_84793033_84816949
ES.874.328	chr1	-	6496	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_37	253.528597992416	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7888	False	NA	-25	True	AATAAA	-17	NA	84817031	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760660_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.329	chr1	-	6448	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-42	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	281.887981962694	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7889	False	NA	-25	True	AATAAA	-17	NA	84817030	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.33	chr1	-	9547	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9493	-9	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	258.943708439484	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGGTTAGTTTTGTTACT	NA	False	NA	-17	True	AATAAA	-13	NA	84827730	84698918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.330	chr1	-	6674	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-113	-42	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_40	284.907587356556	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7774	False	NA	-25	True	AATAAA	-17	NA	84817145	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.331	chr1	-	6386	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	330.459417030072	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827733	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732201_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.333	chr1	-	6611	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9539	-42	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_42	302.374837770948	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827776	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.334	chr1	-	5389	37	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-55	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	246.304029918962	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7832	False	NA	-25	True	AATAAA	-17	NA	84817087	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702173_84709438_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.336	chr1	-	7096	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	422	-42	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_42	308.600821645344	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7354	False	NA	-25	True	AATAAA	-17	NA	84817565	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84816744_84816782_84817082
ES.874.339	chr1	-	6390	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9580	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	333.209609201904	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	9985	False	NA	-25	True	AATAAA	-17	NA	84827817	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827792
ES.874.34	chr1	-	9646	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9742	-10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_41	266.772926231537	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGGTTAGTTTTGTTAC	9855	False	NA	-18	True	AATAAA	-12	NA	84827979	84698919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827792
ES.874.340	chr1	-	5721	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9449	-42	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_38	305.900669131337	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827686	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84822070_84822113_84827643
ES.874.341	chr1	-	6426	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-42	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	280.24758585044	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7851	False	NA	-25	True	AATAAA	-17	NA	84817068	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.342	chr1	-	5344	37	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	2	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	333.031181343299	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7889	False	NA	-25	True	AATAAA	-17	NA	84817030	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716473_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746407_84771796_84772049_84792543_84792691_84816949
ES.874.343	chr1	-	6531	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9489	-42	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	273.500799816015	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827726	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.344	chr1	-	6742	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	145	-42	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_41	290.831778079679	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7077	False	NA	-25	True	AATAAA	-17	NA	84817842	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84817665
ES.874.347	chr1	-	6648	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9505	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	337.965883969001	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827742	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721541_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.352	chr1	-	5684	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	362.559596316246	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827713	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84707956_84708019_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84792543_84792691_84827643
ES.874.353	chr1	-	6282	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-5781	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	342.568745273259	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	901	False	NA	-25	True	AATAAA	-17	NA	84824018	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84823998
ES.874.354	chr1	-	6579	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-42	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	298.522849596329	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7839	False	NA	-25	True	AATAAA	-17	NA	84817080	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.355	chr1	-	8207	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9539	-42	intron_retention	FALSE	canonical	3	100	junction_39	231.249997778844	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827776	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.356	chr1	-	6474	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	-42	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	265.37141895841	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827759	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.357	chr1	-	5302	36	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-222	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	295.802452005126	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7665	False	NA	-25	True	AATAAA	-17	NA	84817254	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84792543_84792703_84817177
ES.874.358	chr1	-	5728	8	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	12844	42	-4659	-42	3prime_fragment	FALSE	canonical	3	1109	junction_7	134.411339414743	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84714154	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733
ES.874.359	chr1	-	6407	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-12	-42	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	297.013272426706	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8455	False	NA	-25	True	AATAAA	-17	NA	84816464	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
ES.874.361	chr1	-	6564	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	-42	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	370.105073294773	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7845	False	NA	-25	True	AATAAA	-17	NA	84817074	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.362	chr1	-	6660	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	327.423876653757	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7851	False	NA	-25	True	AATAAA	-17	NA	84817068	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.363	chr1	-	6606	43	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-91	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	336.191134661435	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	6591	False	NA	-25	True	AATAAA	-17	NA	84818328	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728224_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.365	chr1	-	6086	37	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	286.111877021629	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827713	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84771245_84772049_84792543_84792691_84827643
ES.874.367	chr1	-	6539	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	36	-42	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_41	266.519289782736	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	6718	False	NA	-25	True	AATAAA	-17	NA	84818201	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84818014
ES.874.369	chr1	-	6400	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-42	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	324.779397971635	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827733	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.37	chr1	-	8087	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	1529	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_4	246.158201163398	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTGATTCCTTGTA	7851	False	NA	15	True	ATTAAA	-44	NA	84817068	84700455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.370	chr1	-	6474	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	5	-42	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	270.884587970597	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8472	False	NA	-25	True	AATAAA	-17	NA	84816447	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.375	chr1	-	5726	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-42	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_38	273.586980016321	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827733	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84827643
ES.874.376	chr1	-	6657	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_41	277.812640419187	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7899	False	NA	-25	True	AATAAA	-17	NA	84817020	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793043_84816949
ES.874.377	chr1	-	4293	29	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1720	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	354.799992162874	1672	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	5555	False	NA	-25	True	AATAAA	-17	NA	84739625	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702087_84702131_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721541_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584
ES.874.378	chr1	-	8256	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	-42	intron_retention	FALSE	canonical	3	104	junction_16	294.302564336433	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7899	False	NA	-25	True	AATAAA	-17	NA	84817020	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.379	chr1	-	6488	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-26	-42	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	294.274487380239	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7861	False	NA	-25	True	AATAAA	-17	NA	84817058	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.38	chr1	-	6156	30	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-3197	1521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	260.565998769267	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTGACTTCATTGAT	9436	False	NA	7	True	ATTAAA	-36	NA	84741102	84700463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048
ES.874.380	chr1	-	5336	36	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-40	-42	combination_of_known_splicesites	FALSE	canonical	2	2	junction_34	262.740216229815	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7847	False	NA	-25	True	AATAAA	-17	NA	84817072	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84792543_84792691_84816949
ES.874.381	chr1	-	6557	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	3	-42	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	299.676339386119	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7900	False	NA	-25	True	AATAAA	-17	NA	84817019	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.382	chr1	-	3548	23	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2710	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	279.395188733814	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	9985	False	NA	-25	True	AATAAA	-17	NA	84735195	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717346_84719903_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137
ES.874.385	chr1	-	6467	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9449	-42	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_28	273.927230300312	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827686	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739736_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.386	chr1	-	6690	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	300.10738906803	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7854	False	NA	-25	True	AATAAA	-17	NA	84817065	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.387	chr1	-	5244	36	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1833	-42	combination_of_known_splicesites	FALSE	canonical	1	1	junction_34	249.272679151624	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	2190	False	NA	-25	True	AATAAA	-17	NA	84763852	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84760547_84760685_84763811
ES.874.390	chr1	-	6578	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9	-42	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	278.788356105487	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8458	False	NA	-25	True	AATAAA	-17	NA	84816461	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.393	chr1	-	6561	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-42	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	335.557619641952	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7839	False	NA	-25	True	AATAAA	-17	NA	84817080	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.397	chr1	-	6414	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	62	-42	combination_of_known_junctions	FALSE	canonical	3	22	junction_35	282.054503478107	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8529	False	NA	-25	True	AATAAA	-17	NA	84816390	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.398	chr1	-	6418	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9544	-42	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	317.90507190233	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827781	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.399	chr1	-	6740	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	215	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	332.193766883252	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8682	False	NA	-25	True	AATAAA	-17	NA	84816237	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84792895_84793033_84816112
ES.874.4	chr1	-	6687	46	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9522	193788	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	384.095082106977	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAACAAAACCCTTCT	NA	False	NA	NA	False	NA	NA	NA	84827759	84505121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84505154_84561456_84561560_84641506_84641542_84702022_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.40	chr1	-	7908	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-21	1509	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	248.597706647002	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGTGCTGACAGATTT	7866	False	NA	-5	True	ATTAAA	-24	NA	84817053	84700475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
ES.874.402	chr1	-	6758	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	306.344282076551	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7839	False	NA	-25	True	AATAAA	-17	NA	84817080	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84816744_84816835_84816949
ES.874.403	chr1	-	6613	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9535	-42	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	339.20484592647	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	NA	False	NA	-25	True	AATAAA	-17	NA	84827772	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.404	chr1	-	6693	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-42	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	334.456167538491	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7851	False	NA	-25	True	AATAAA	-17	NA	84817068	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.405	chr1	-	6667	45	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	300	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	369.155202500328	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7232	False	NA	-25	True	AATAAA	-17	NA	84817687	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84811045_84811144_84814100_84814167_84817665
ES.874.406	chr1	-	6382	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-31	-42	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	278.564659235518	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7856	False	NA	-25	True	AATAAA	-17	NA	84817063	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.407	chr1	-	6596	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-56	-42	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_30	322.736602199213	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7831	False	NA	-25	True	AATAAA	-17	NA	84817088	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741226_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.408	chr1	-	7285	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1831	-42	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_35	285.821938884898	1675	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	2192	False	NA	-25	True	AATAAA	-17	NA	84763850	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84750837_84752701_84754037_84754134_84755144_84755229_84760547_84760685_84763811
ES.874.41	chr1	-	7811	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-733	1509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	286.135427179125	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGTGCTGACAGATTT	NA	False	NA	-5	True	ATTAAA	-24	NA	84772005	84700475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739753_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245
ES.874.410	chr1	-	6682	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	223	-42	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_41	288.34095588585	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	8690	False	NA	-25	True	AATAAA	-17	NA	84816229	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816112
ES.874.411	chr1	-	6684	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_39	278.842424139513	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7840	False	NA	-25	True	AATAAA	-17	NA	84817079	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772051_84792433_84792691_84816949
ES.874.413	chr1	-	6913	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-221	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_42	362.883986164953	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7666	False	NA	-25	True	AATAAA	-17	NA	84817253	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84792895_84793033_84816949
ES.874.415	chr1	-	6693	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-47	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_32	303.304896102915	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7840	False	NA	-25	True	AATAAA	-17	NA	84817079	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743831_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.417	chr1	-	6426	39	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-42	combination_of_known_splicesites	FALSE	canonical	0	0	junction_31	258.617725835534	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7851	False	NA	-25	True	AATAAA	-17	NA	84817068	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.418	chr1	-	5745	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	285.464936746649	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGGGCTGTGTGTATC	7854	False	NA	-25	True	AATAAA	-17	NA	84817065	84702026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706004_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816949
ES.874.419	chr1	-	5782	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	6	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	383.454992290403	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7903	False	NA	-26	True	AATAAA	-16	NA	84817016	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84752632_84752701_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816744_84816835_84816949
ES.874.42	chr1	-	7558	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-660	1508	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	260.084255300774	1688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGTGCTGACAGATT	NA	False	NA	-6	True	ATTAAA	-23	NA	84771932	84700476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392
ES.874.420	chr1	-	6577	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-15	-43	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_40	267.454191171124	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	8452	False	NA	-26	True	AATAAA	-16	NA	84816467	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.421	chr1	-	7255	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	448	-43	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	305.589872325683	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7380	False	NA	-26	True	AATAAA	-16	NA	84817539	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84816744_84816835_84816949
ES.874.423	chr1	-	6502	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	-43	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7819	False	NA	-26	True	AATAAA	-16	NA	84817100	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.424	chr1	-	7395	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9489	-43	intron_retention	FALSE	canonical	3	17	junction_37	307.341575745065	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827726	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84822070_84822113_84827643
ES.874.427	chr1	-	6653	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-84	-43	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	296.494839361489	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7803	False	NA	-26	True	AATAAA	-16	NA	84817116	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.428	chr1	-	8410	32	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1898	-43	intron_retention	FALSE	canonical	3	784	junction_28	182.107085624792	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	4204	False	NA	-26	True	AATAAA	-16	NA	84746334	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303
ES.874.429	chr1	-	6606	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-43	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_41	278.358774563622	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827713	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84827643
ES.874.43	chr1	-	7956	43	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-7	1507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	340.382924288796	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	6675	False	NA	-7	True	ATTAAA	-22	NA	84818244	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720042_84720809_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.430	chr1	-	6383	41	NIC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	8	-43	combination_of_known_junctions	FALSE	canonical	3	29	junction_40	271.134808490168	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	6690	False	NA	-26	True	AATAAA	-16	NA	84818229	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ES.874.431	chr1	-	3394	22	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	43	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	283.81425371578	1661	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	9934	False	NA	-26	True	AATAAA	-16	NA	84732082	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720054_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991
ES.874.433	chr1	-	6362	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	313.470381300067	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7854	False	NA	-26	True	AATAAA	-16	NA	84817065	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
ES.874.435	chr1	-	9079	23	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-172	-43	intron_retention	FALSE	non_canonical	0	0	junction_8	351.370034047365	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7103	False	NA	-26	True	AATAAA	-16	NA	84738077	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709851_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694
ES.874.436	chr1	-	10493	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-3874	-43	intron_retention	FALSE	non_canonical	0	0	junction_34	328.762580728912	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	2808	False	NA	-26	True	AATAAA	-16	NA	84822111	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760692_84763818_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070
ES.874.437	chr1	-	6529	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-110	-43	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_16	269.554546942754	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7777	False	NA	-26	True	AATAAA	-16	NA	84817142	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.438	chr1	-	5717	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-44	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	345.225055942487	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7843	False	NA	-26	True	AATAAA	-16	NA	84817076	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719967_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816949
ES.874.439	chr1	-	6667	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9495	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_41	305.479657034111	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827732	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84811045_84811144_84822070_84822113_84827643
ES.874.44	chr1	-	8011	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9516	1507	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	258.943708439484	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84827753	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.440	chr1	-	5954	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	214	-43	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	338.228102666095	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	8681	False	NA	-26	True	AATAAA	-16	NA	84816238	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771960_84772049_84773410_84773537_84792543_84792691_84816112
ES.874.442	chr1	-	4158	11	ISM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	7283	43	7283	-43	3prime_fragment	FALSE	canonical	3	994	junction_9	137.809615049168	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84719715	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234
ES.874.443	chr1	-	5864	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9495	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	336.042736864532	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827732	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84811045_84811144_84822070_84822113_84827643
ES.874.444	chr1	-	6131	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-43	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_39	302.317184877256	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7851	False	NA	-26	True	AATAAA	-16	NA	84817068	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771821_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.445	chr1	-	6617	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-35	-43	combination_of_known_junctions	FALSE	canonical	3	23	junction_41	315.39205934921	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	6897	False	NA	-26	True	AATAAA	-16	NA	84818022	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84817954
ES.874.447	chr1	-	6316	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9539	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	343.330332611693	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827776	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.448	chr1	-	6978	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-233	-43	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_42	318.183564333931	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7654	False	NA	-26	True	AATAAA	-16	NA	84817265	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84811045_84811144_84816949
ES.874.45	chr1	-	8217	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-153	1568	-146	1507	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7741	False	NA	-7	True	ATTAAA	-22	NA	84817178	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.454	chr1	-	6378	42	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	236	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	323.957431784743	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	8703	False	NA	-26	True	AATAAA	-16	NA	84816216	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755233_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816112
ES.874.455	chr1	-	6520	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9527	-43	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	297.813659206149	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827764	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.456	chr1	-	6340	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9501	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	305.194068410935	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827738	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755222_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84827643
ES.874.457	chr1	-	6292	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-2196	-43	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_4	295.157685266025	1676	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84773468	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84703996_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410
ES.874.458	chr1	-	6498	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	48	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	280.262127302281	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	8515	False	NA	-26	True	AATAAA	-16	NA	84816404	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741198_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.46	chr1	-	8015	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34279	1507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	309.799209166195	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84852516	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84852417
ES.874.460	chr1	-	12010	38	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34	-43	intron_retention	FALSE	canonical	3	439	junction_37	208.296773027721	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7853	False	NA	-26	True	AATAAA	-16	NA	84817066	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.461	chr1	-	6477	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-34	-43	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	315.665452662364	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7853	False	NA	-26	True	AATAAA	-16	NA	84817066	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.462	chr1	-	6667	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9467	-43	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	312.065920742539	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827704	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84822070_84822113_84827643
ES.874.463	chr1	-	6430	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9476	-43	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	293.860851222178	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827713	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.464	chr1	-	6669	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	335.219815009495	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7839	False	NA	-26	True	AATAAA	-16	NA	84817080	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728219_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739776_84741028_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.466	chr1	-	6650	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-75	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	323.645001279278	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7812	False	NA	-26	True	AATAAA	-16	NA	84817107	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.467	chr1	-	6536	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9493	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	311.525110344255	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827730	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722916_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735135_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.468	chr1	-	8336	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-41	-43	intron_retention	FALSE	non_canonical	0	0	junction_27	314.058513656293	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7846	False	NA	-26	True	AATAAA	-16	NA	84817073	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739753_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84816949
ES.874.469	chr1	-	6489	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	-43	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	329.183268674154	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827733	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.47	chr1	-	8005	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	1507	combination_of_known_junctions	FALSE	canonical	3	22	junction_35	287.14383020395	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7854	False	NA	-7	True	ATTAAA	-22	NA	84817065	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.471	chr1	-	6983	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	440	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	355.260107027532	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7372	False	NA	-26	True	AATAAA	-16	NA	84817547	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816782_84817082
ES.874.472	chr1	-	6466	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	33	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	301.029245724859	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	6965	False	NA	-26	True	AATAAA	-16	NA	84817954	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721541_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84817838
ES.874.473	chr1	-	6458	41	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	2	-43	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_40	297.532467766125	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	6684	False	NA	-26	True	AATAAA	-16	NA	84818235	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ES.874.476	chr1	-	7987	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9485	-43	intron_retention	FALSE	canonical	0	0	junction_10	295.609403394073	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827722	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716478_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.478	chr1	-	6617	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9531	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	326.791814381053	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	NA	False	NA	-26	True	AATAAA	-16	NA	84827768	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.479	chr1	-	6847	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	-43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_40	348.88352250702	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTGGGCTGTGTGTAT	7883	False	NA	-26	True	AATAAA	-16	NA	84817036	84702027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792535_84792691_84811045_84811144_84816744_84816835_84816949
ES.874.48	chr1	-	7215	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	292	1507	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_39	281.444578246924	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7224	False	NA	-7	True	ATTAAA	-22	NA	84817695	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84817665
ES.874.480	chr1	-	6595	42	NIC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	2	-44	combination_of_known_junctions	FALSE	canonical	3	29	junction_41	288.938527948036	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	6684	False	NA	-27	True	AATAAA	-15	NA	84818235	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.481	chr1	-	6328	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	271	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	320.818675031024	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	8738	False	NA	-27	True	AATAAA	-15	NA	84816181	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704028_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816112
ES.874.482	chr1	-	6499	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9520	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	341.909892186523	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	NA	False	NA	-27	True	AATAAA	-15	NA	84827757	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726896_84727071_84728107_84728216_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.483	chr1	-	6607	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	-44	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	292.990421805018	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7911	False	NA	-27	True	AATAAA	-15	NA	84817008	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.484	chr1	-	6565	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9485	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	326.529687962307	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	NA	False	NA	-27	True	AATAAA	-15	NA	84827722	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.485	chr1	-	6718	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	68	-44	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_41	290.602537191692	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	6750	False	NA	-27	True	AATAAA	-15	NA	84818169	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818014
ES.874.486	chr1	-	6650	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-53	-44	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_42	306.808571316231	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	8414	False	NA	-27	True	AATAAA	-15	NA	84816505	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816331
ES.874.488	chr1	-	7107	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	428	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_42	297.355812159344	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7360	False	NA	-27	True	AATAAA	-15	NA	84817559	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84792895_84793043_84816949
ES.874.489	chr1	-	6444	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9488	-44	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	295.604723051414	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	NA	False	NA	-27	True	AATAAA	-15	NA	84827725	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
ES.874.491	chr1	-	6648	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	-44	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_43	327.599793440074	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7888	False	NA	-27	True	AATAAA	-15	NA	84817031	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.493	chr1	-	6733	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-162	-44	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	351.066279668654	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7725	False	NA	-27	True	AATAAA	-15	NA	84817194	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.494	chr1	-	6403	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	203	-44	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_35	302.099750703307	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	8670	False	NA	-27	True	AATAAA	-15	NA	84816249	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816112
ES.874.495	chr1	-	6388	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-68	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	311.746611897779	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7819	False	NA	-27	True	AATAAA	-15	NA	84817100	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721539_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
ES.874.496	chr1	-	6112	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-31	-44	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	336.845702930106	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	7856	False	NA	-27	True	AATAAA	-15	NA	84817063	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771960_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.497	chr1	-	6515	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9475	-44	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	275.538273203561	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	NA	False	NA	-27	True	AATAAA	-15	NA	84827712	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.498	chr1	-	6609	42	NNC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-89	-44	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	342.846397950665	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTGGGCTGTGTGTA	6593	False	NA	-27	True	AATAAA	-15	NA	84818326	84702028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.5	chr1	-	158	1	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	84570085	84569927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84569900_84570100
ES.874.50	chr1	-	8234	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	4	1507	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_41	310.811935884708	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	8471	False	NA	-7	True	ATTAAA	-22	NA	84816448	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816331
ES.874.502	chr1	-	6534	40	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	44	-45	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_39	308.270100664725	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTCTGGGCTGTGTGT	6726	False	NA	-28	True	AATAAA	-14	NA	84818193	84702029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818014
ES.874.503	chr1	-	7183	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	437	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	312.226780025958	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTCTGGGCTGTGTGT	7369	False	NA	-28	True	AATAAA	-14	NA	84817550	84702029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84792895_84793033_84816949
ES.874.505	chr1	-	6504	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	-45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	310.958564812644	1679	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTCTGGGCTGTGTGT	7839	False	NA	-28	True	AATAAA	-14	NA	84817080	84702029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741226_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.506	chr1	-	6564	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-58	-45	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_8	277.205447276925	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTCTGGGCTGTGTGT	8409	False	NA	-28	True	AATAAA	-14	NA	84816510	84702029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709798_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.507	chr1	-	6482	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9646	-45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_42	295.203158455164	1687	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTCTGGGCTGTGTGT	9951	False	NA	-28	True	AATAAA	-14	NA	84827883	84702029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827792
ES.874.509	chr1	-	6682	44	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	232	-47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_43	349.879789292138	1677	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAATTCTGGGCTGTGT	8699	False	NA	-30	True	AATAAA	-12	NA	84816220	84702031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84811045_84811144_84816112
ES.874.51	chr1	-	8147	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9523	1507	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	270.908748968537	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84827760	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.510	chr1	-	6360	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-5	3277	2	111	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCAGGCCCTAAAGCAT	7889	False	NA	NA	False	NA	NA	NA	84817030	84702186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.511	chr1	-	5112	33	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9495	1046	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	334.184870010224	1643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTGCTTGGATTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	84827732	84705281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738859_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754105_84792554_84792691_84827643
ES.874.512	chr1	-	4784	30	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-113	1840	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_13	223.672652352106	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGTCTTTTTCTTTTT	7774	False	NA	NA	False	ATTAAA	-15	NA	84817145	84720608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.513	chr1	-	6005	11	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1102	1817	intron_retention	FALSE	canonical	3	819	junction_10	118.441926698277	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAATGAAAACAA	8377	False	NA	NA	False	NA	NA	NA	84736803	84720631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84720943_84721540_84721741_84722398_84722473_84722733_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694
ES.874.514	chr1	-	4870	30	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-48	1817	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_29	236.285388418378	1507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAATGAAAACAA	7839	False	NA	NA	False	NA	NA	NA	84817080	84720631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.515	chr1	-	1970	12	ISM	ENSMUSG00000026219.15	ENSMUST00000186648.7	6442	41	77274	22761	-1830	2133	internal_fragment	FALSE	canonical	3	92	junction_9	237.618139386052	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATGCACTGTATTTG	5445	False	NA	NA	False	ATTAAA	-16	NA	84739735	84724745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584
ES.874.516	chr1	-	176	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1390	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAGAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	84725364	84725188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84725200_84725400
ES.874.517	chr1	-	3124	18	ISM	ENSMUSG00000026219.15	ENSMUST00000186894.7	3073	20	-153	3226	-146	-980	5prime_fragment	FALSE	canonical	3	439	junction_17	106.110310167653	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGAGTTGAATTTTGT	7741	False	NA	NA	False	AATAAA	-29	NA	84817178	84735349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.518	chr1	-	2913	19	NNC	ENSMUSG00000026219.15	novel	3073	20	NA	NA	-33	-991	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_16	173.681239169653	1307	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGGTAAGTTGGAG	7854	False	NA	NA	False	AATAAA	-18	NA	84817065	84735360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.519	chr1	-	122	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	8972	False	NA	NA	False	AATAAA	-15	NA	84736208	84736086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84736100_84736200
ES.874.52	chr1	-	8263	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	1507	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	312.713880549673	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7911	False	NA	-7	True	ATTAAA	-22	NA	84817008	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
ES.874.520	chr1	-	2012	10	ISM	ENSMUSG00000026219.15	ENSMUST00000186894.7	3073	20	-61	11356	-54	192	5prime_fragment	FALSE	canonical	3	439	junction_9	120.582843813796	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCCCAATTTTATG	7833	False	NA	NA	False	NA	NA	NA	84817086	84743479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.521	chr1	-	5103	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAAAAGGCCTA	1068	False	NA	NA	False	NA	NA	NA	84823851	84818748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84818700_84823900
ES.874.522	chr1	-	248	1	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTTTACAACA	4772	False	NA	NA	False	NA	NA	NA	84820147	84819899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84819900_84820100
ES.874.53	chr1	-	8098	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-42	1507	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7845	False	NA	-7	True	ATTAAA	-22	NA	84817074	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.54	chr1	-	8273	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-18884	1507	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_40	241.832064664717	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	3483	False	NA	-7	True	ATTAAA	-22	NA	84837121	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84836836
ES.874.55	chr1	-	8082	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9503	1507	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	303.86176853135	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84827740	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.56	chr1	-	8115	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	213	1507	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_40	238.445264945647	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	8680	False	NA	-7	True	ATTAAA	-22	NA	84816239	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
ES.874.59	chr1	-	8018	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9496	1507	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_42	316.096132116844	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84827733	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84822070_84822113_84827643
ES.874.6	chr1	-	9567	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	298.567655405359	1690	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTACTTTATGTACA	8499	False	NA	-8	True	AATAAA	-22	NA	84816420	84698909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
ES.874.60	chr1	-	8048	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	29	1507	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	367.591349190919	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	8496	False	NA	-7	True	ATTAAA	-22	NA	84816423	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732203_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741555_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816331
ES.874.61	chr1	-	7238	39	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-226	1507	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	279.79277551416	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84771498	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722422_84722720_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245
ES.874.62	chr1	-	8057	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-67	1507	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	242.994257905408	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7820	False	NA	-7	True	ATTAAA	-22	NA	84817099	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.63	chr1	-	7921	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-21411	1507	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	288.564571968081	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84792683	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84773410_84773537_84792543
ES.874.64	chr1	-	8083	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	11	1507	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	272.903067727353	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	8478	False	NA	-7	True	ATTAAA	-22	NA	84816441	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.65	chr1	-	8247	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-50	1507	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	7837	False	NA	-7	True	ATTAAA	-22	NA	84817082	84700477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.68	chr1	-	8052	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-69	1506	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	7818	False	NA	-8	True	ATTAAA	-21	NA	84817101	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
ES.874.69	chr1	-	8271	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-107	1506	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_41	303.047752856873	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	7780	False	NA	-8	True	ATTAAA	-21	NA	84817139	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816854_84816949
ES.874.7	chr1	-	4967	17	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	218.628743178362	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTTTGTTACTTTATG	7888	False	NA	-12	True	AATAAA	-18	NA	84817031	84698913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84701374_84738477_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.70	chr1	-	4687	20	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1092	1506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	292.299963561512	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	8691	False	NA	-8	True	ATTAAA	-21	NA	84729356	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725059_84726878_84727071_84728078_84728221_84729259
ES.874.72	chr1	-	8086	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-4	1506	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_20	253.847462809854	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	7883	False	NA	-8	True	ATTAAA	-21	NA	84817036	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729588_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.73	chr1	-	8073	42	NIC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-7	1506	combination_of_known_junctions	FALSE	canonical	3	29	junction_41	313.788320454314	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	6675	False	NA	-8	True	ATTAAA	-21	NA	84818244	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84818203
ES.874.75	chr1	-	7990	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	250	1506	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_41	264.014139383045	1689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	8717	False	NA	-8	True	ATTAAA	-21	NA	84816202	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816112
ES.874.76	chr1	-	8110	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9529	1506	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_40	232.548382062744	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGTGGTGCTGACAGA	NA	False	NA	-8	True	ATTAAA	-21	NA	84827766	84700478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.78	chr1	-	7391	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-31	1505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	338.204109045115	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	7856	False	NA	-9	True	ATTAAA	-20	NA	84817063	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739580_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816744_84816835_84816949
ES.874.8	chr1	-	9600	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9467	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	304.146838508968	1700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAGTTTTGTTACTTTA	NA	False	NA	-14	True	AATAAA	-16	NA	84827704	84698915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716394_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.80	chr1	-	8024	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-33	1505	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_39	251.464897916186	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	7854	False	NA	-9	True	ATTAAA	-20	NA	84817065	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771383_84772049_84792543_84792691_84816949
ES.874.81	chr1	-	8147	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-75	1505	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	291.903344205366	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	7812	False	NA	-9	True	ATTAAA	-20	NA	84817107	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
ES.874.83	chr1	-	8122	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-15	1505	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	238.924381342717	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	8452	False	NA	-9	True	ATTAAA	-20	NA	84816467	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
ES.874.84	chr1	-	8154	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2	1505	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	304.84921424621	1691	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	7889	False	NA	-9	True	ATTAAA	-20	NA	84817030	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772046_84792543_84792691_84816744_84816835_84816949
ES.874.85	chr1	-	7994	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9495	1505	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	265.37141895841	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	NA	False	NA	-9	True	ATTAAA	-20	NA	84827732	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84827643
ES.874.86	chr1	-	7683	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9493	1505	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_39	312.328063358062	1699	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	NA	False	NA	-9	True	ATTAAA	-20	NA	84827730	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771821_84772049_84773410_84773537_84792543_84792691_84827643
ES.874.87	chr1	-	8155	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-38	1505	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	296.494839361489	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGTGGTGCTGACAG	7849	False	NA	-9	True	ATTAAA	-20	NA	84817070	84700479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.9	chr1	-	9795	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-36	-6	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTAGTTTTGTTACTTTA	7851	False	NA	-14	True	AATAAA	-16	NA	84817068	84698915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ES.874.94	chr1	-	7579	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-220	2273	-213	802	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTATAGTTCTGTGC	7674	False	NA	-4	True	AATAAA	-19	NA	84817245	84701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ES.874.95	chr1	-	8853	5	NIC	ENSMUSG00000026219.15	novel	2847	18	NA	NA	-1964	802	intron_retention	FALSE	canonical	3	1109	junction_4	157.185400085377	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTATAGTTCTGTGC	NA	False	NA	-4	True	AATAAA	-19	NA	84711459	84701182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84709499_84709733
ES.874.96	chr1	-	4514	24	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	2257	801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	274.365788704317	1671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	9532	False	NA	-5	True	AATAAA	-18	NA	84735648	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84724975_84726974_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442
ES.874.97	chr1	-	8969	40	NIC	ENSMUSG00000026219.15	novel	9590	41	NA	NA	-18	801	intron_retention	FALSE	canonical	3	29	junction_39	238.173655838142	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	6664	False	NA	-5	True	AATAAA	-18	NA	84818255	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ES.874.98	chr1	-	5773	34	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-1902	801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	295.150345340224	1680	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTATAGTTCTGTG	4200	False	NA	-5	True	AATAAA	-18	NA	84746338	84701183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727064_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303
ES.8740.1	chr13	-	179	1	Intergenic	novelGene_7188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	14777398	14777219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_14777200_14777400
ES.8741.1	chr13	-	2909	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-6	-1729	-4	0	multi-exon	FALSE	canonical	3	41	junction_2	520.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGAGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14787616	14782768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787446
ES.8741.10	chr13	-	756	3	FSM	ENSMUSG00000015672.5	ENSMUST00000015816.5	658	3	-32	-66	-20	66	multi-exon	FALSE	canonical	3	18	junction_2	532	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGGCTCAATGGATTAA	NA	False	NA	-17	True	AATAAA	-15	NA	14787632	14784891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787492
ES.8741.11	chr13	-	2637	2	NNC	ENSMUSG00000015672.5	novel	1174	3	NA	NA	-5	64	intron_retention	TRUE	non_canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAAGGCTCAATGGATT	NA	False	NA	-19	True	AATAAA	-13	NA	14787617	14784893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14787172_14787258
ES.8741.12	chr13	-	1348	2	NNC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-4	64	intron_retention	FALSE	canonical	2	6	junction_1	0	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAAGGCTCAATGGATT	NA	False	NA	-19	True	AATAAA	-13	NA	14787616	14784893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14786190_14787564
ES.8741.2	chr13	-	2915	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	98	0	-40	0	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGAGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14787652	14782768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787476
ES.8741.3	chr13	-	1285	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	116	1612	-22	117	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	14787634	14784380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787476
ES.8741.4	chr13	-	3266	1	FSM	ENSMUSG00000015672.5	ENSMUST00000223530.2	2903	1	-40	-323	-40	111	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	14787652	14784386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14784400_14787700
ES.8741.5	chr13	-	828	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	77	2108	-61	81	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTGTGTATTTCTAT	NA	False	NA	-2	True	AATAAA	-30	NA	14787673	14784876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787476
ES.8741.6	chr13	-	1459	2	NIC	ENSMUSG00000015672.5	novel	3013	3	NA	NA	-10	81	intron_retention	FALSE	canonical	3	1113	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTGTGTATTTCTAT	NA	False	NA	-2	True	AATAAA	-30	NA	14787622	14784876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_14786190_14787476
ES.8741.7	chr13	-	797	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-7	384	-5	76	multi-exon	FALSE	canonical	3	41	junction_2	520.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATTAATTTGTGTATT	NA	False	NA	-7	True	AATAAA	-25	NA	14787617	14784881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_14785326_14786007_14786190_14787446
ES.8741.9	chr13	-	727	3	NNC	ENSMUSG00000015672.5	novel	658	3	NA	NA	-1	68	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTCAATGGATTAATT	NA	False	NA	-15	True	AATAAA	-17	NA	14787611	14784889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_14785316_14786007_14786190_14787492
ES.8742.1	chr13	+	2319	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	-124	716	-124	-716	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACACAAAATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	14787700	14801505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.10	chr13	+	822	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	19	-2055	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1596.10964535648	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTTAGTTTTTA	NA	False	NA	6	True	AATAAA	-6	NA	14787843	14800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14787901_14790596_14790674_14791336_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.14	chr13	+	4577	6	NIC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	19	-2047	intron_retention	FALSE	canonical	3	4380	junction_3	257.815437862049	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787843	14800174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14787901_14790596_14790674_14791321_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.15	chr13	+	3277	7	NIC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	19	-2047	intron_retention	FALSE	canonical	3	4380	junction_4	249.718953136432	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787843	14800174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_14787901_14790596_14790674_14791321_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.16	chr13	+	4880	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	20	-1989	20	1989	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGCGCTGGCTACAGA	NA	False	NA	NA	False	AATAAA	-19	NA	14787844	14804210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.19	chr13	+	2871	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	20	20	20	-20	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACAACA	NA	False	NA	-13	True	TTTAAA	-17	NA	14787844	14802201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.2	chr13	+	974	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	-22	1959	-22	-1959	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATATATTTTCTTTA	NA	False	NA	9	True	ATTAAA	-17	NA	14787802	14800262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.20	chr13	+	2642	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	20	249	20	-249	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGAATAAATAAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	14787844	14801972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.21	chr13	+	830	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	20	-2055	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1640.64072849603	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTTAGTTTTTA	NA	False	NA	6	True	AATAAA	-6	NA	14787844	14800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14787895_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.23	chr13	+	3105	3	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	7618	2055	4086	-2055	3prime_fragment	FALSE	canonical	3	4424	junction_1	23.5	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTTAGTTTTTA	NA	False	NA	6	True	AATAAA	-6	NA	14795442	14800166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_14798257_14799787_14799846_14799933
ES.8742.3	chr13	+	852	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	-1	2060	-1	-2060	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTAAAACCAATTTTAGT	NA	False	NA	1	True	AATAAA	-1	NA	14787823	14800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8742.4	chr13	+	2961	9	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	2025.33527702823	460	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACAACA	NA	False	NA	-13	True	TTTAAA	-17	NA	14787823	14802201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14795515_14795585_14798182_14798257_14799787_14799846_14799933
ES.8742.6	chr13	+	830	8	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	15	-2060	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1644.24049832332	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTAAAACCAATTTTAGT	NA	False	NA	1	True	AATAAA	-1	NA	14787839	14800161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798188_14798257_14799787_14799846_14799933
ES.8742.7	chr13	+	7156	6	NNC	ENSMUSG00000015671.12	novel	2911	8	NA	NA	16	-2047	intron_retention	FALSE	non_canonical	0	0	junction_3	1860.13246840111	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787840	14800174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14787901_14790596_14790674_14791321_14797683_14797897_14798257_14799787_14799846_14799933
ES.8742.8	chr13	+	1212	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	17	1682	17	-1682	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCCTGTGTGTTTCTGC	NA	False	NA	NA	False	AGTAAA	-12	NA	14787841	14800539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ES.8743.1	chr13	+	2026	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	2	7	2	-7	multi-exon	FALSE	canonical	3	36	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGAGGCCTGTTTT	NA	False	NA	3	True	ATTAAA	-10	NA	14804740	14812781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14804870_14810884
ES.8743.2	chr13	+	1777	2	NNC	ENSMUSG00000039182.7	novel	2035	2	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCCTGTTTTTCATTGTG	NA	False	NA	11	True	ATTAAA	-18	NA	14804749	14812789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14804870_14811132
ES.8743.3	chr13	+	1806	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	-4	1112	-4	-219	multi-exon	FALSE	canonical	3	129	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	TATAAA	-3	NA	14804828	14812569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14804950_14810884
ES.8743.4	chr13	+	2092	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	-1	823	-1	70	multi-exon	FALSE	canonical	3	129	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATCACTGCTTGTTAT	NA	False	NA	80	True	ACTAAA	-28	NA	14804831	14812858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14804950_14810884
ES.8743.5	chr13	+	1764	2	NNC	ENSMUSG00000039182.7	novel	2914	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804841	14812788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_14804950_14811132
ES.8743.6	chr13	+	2282	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	24	608	-5	285	multi-exon	FALSE	canonical	3	129	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGTCTGTTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	14804856	14813073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_14804950_14810884
ES.8744.1	chr13	+	8258	15	NIC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	-43	3	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	4.81970868795353	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGGATTTCTTTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	15637776	15904614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_15637994_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
ES.8744.2	chr13	+	2046	8	NNC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	-40	9398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.64256197843096	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATATATGTTTATAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	15637779	15825253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_15637994_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15824490
ES.8744.3	chr13	+	9019	16	NNC	ENSMUSG00000021318.16	novel	8170	15	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.36234948378079	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACTGGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	15637808	15904611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_15638697_15639150_15639244_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
ES.8744.4	chr13	+	8283	16	NNC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.22354343739161	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACTGGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	15637841	15904611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_15637994_15639150_15639244_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
ES.8744.5	chr13	+	2656	1	Intergenic	novelGene_7190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAACAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	15840083	15842739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_15840100_15842700
ES.8744.6	chr13	+	6647	1	Intergenic	novelGene_7191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGGCTCTGTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	15840572	15847219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_15840600_15847200
ES.8744.7	chr13	+	7612	4	ISM	ENSMUSG00000021318.16	ENSMUST00000110510.4	8170	15	249708	0	249708	0	3prime_fragment	FALSE	canonical	3	15	junction_2	4.98887651569859	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACTGGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	15888272	15904611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_15889700_15894639_15894931_15898024_15898353_15899045
ES.8745.1	chr13	-	163	1	Intergenic	novelGene_7189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGCAGAGCTT	NA	False	NA	NA	False	NA	NA	NA	15707423	15707260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_15707300_15707400
ES.8746.1	chr13	-	3350	1	Antisense	novelGene_ENSMUSG00000113191.2_AS_novelGene_ENSMUSG00000021318.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15826029	15822679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_15822700_15826000
ES.8747.1	chr13	-	1902	1	Intergenic	novelGene_7192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTATTGTAGTCTAGT	NA	False	NA	NA	False	AAAAAG	-4	NA	16675260	16673358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_16673400_16675300
ES.8748.1	chr13	-	2276	1	Intergenic	novelGene_7193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCCTCAAGTTTATTA	NA	False	NA	NA	False	NA	NA	NA	16985527	16983251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_16983300_16985500
ES.8749.1	chr13	+	208	1	Intergenic	novelGene_7194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTTTTTCTCTGGTA	NA	False	NA	NA	False	AATAAA	-11	NA	17691565	17691773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_17691600_17691800
ES.875.1	chr1	-	178	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGCAAGTGGGACTAG	NA	False	NA	NA	False	NA	NA	NA	84871572	84871394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84871400_84871600
ES.8750.1	chr13	+	238	1	Intergenic	novelGene_7195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAATTAGAGATGAA	NA	False	NA	NA	False	NA	NA	NA	17733654	17733892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_17733700_17733900
ES.8751.1	chr13	-	131	1	Intergenic	novelGene_7196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAACCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	17839590	17839459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_17839500_17839600
ES.8752.1	chr13	-	1354	3	FSM	ENSMUSG00000055137.8	ENSMUST00000220514.2	1351	3	21	-24	-9	24	multi-exon	FALSE	canonical	3	10	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTTTTGATGCTACT	NA	False	NA	NA	False	AATAAA	-21	NA	17869333	17857270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17858438_17859293_17859371_17869223
ES.8753.1	chr13	+	2160	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	-258	2414	-17	78	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGATTTTTGTGAATA	NA	False	NA	17	True	AATAAA	-18	NA	17869759	17871919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17869800_17871900
ES.8753.2	chr13	+	930	2	FSM	ENSMUSG00000012429.10	ENSMUST00000221480.2	582	2	-4	-344	-4	344	multi-exon	FALSE	canonical	3	11	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGTGCTCTGCCCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	17869772	17872185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17869944_17871426
ES.8753.3	chr13	+	924	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	-23	1771	-23	78	multi-exon	FALSE	canonical	3	374	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGATTTTTGTGAATA	NA	False	NA	17	True	AATAAA	-18	NA	17869974	17871919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17870406_17871426
ES.8753.4	chr13	+	3882	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	-3	-1207	-3	564	multi-exon	FALSE	canonical	3	374	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTTGTCTTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-23	NA	17869994	17874897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17870406_17871426
ES.8753.5	chr13	+	2667	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	7	-2	7	2	multi-exon	FALSE	canonical	3	374	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTAAACAGTCTCTTAGA	NA	False	NA	NA	False	AATAAA	-20	NA	17870004	17873692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17870406_17871426
ES.8753.6	chr13	+	3683	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	-12	645	8	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTACTAAACAGTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	17870005	17873688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17870000_17873700
ES.8753.8	chr13	+	1368	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	-12	2960	8	-468	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTCTTACTAGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	17870005	17871373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_17870000_17871400
ES.8754.1	chr13	-	1739	1	Intergenic	novelGene_7197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAACATCATTAAACCAA	NA	False	NA	NA	False	TTTAAA	-34	NA	17876647	17874908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_17874900_17876600
ES.8755.1	chr13	-	4386	1	ISM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	89986	411	24342	-411	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTGTGACTCTTTGT	3484	False	NA	NA	False	AATATA	-13	NA	17889696	17885310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_17885300_17889700
ES.8756.1	chr13	+	180	1	Intergenic	novelGene_7199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAGAAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	17922836	17923016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_17922800_17923000
ES.8757.1	chr13	+	2035	1	Antisense	novelGene_ENSMUSG00000041297.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTACCCAACACAAGAATCA	8116	False	NA	NA	False	TTTAAA	-37	NA	17975455	17977490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_17975500_17977500
ES.8758.1	chr13	-	7198	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-298	5648	-298	1432	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTTTGGATAGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	17979980	17890547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.10	chr13	-	4464	14	NNC	ENSMUSG00000041297.9	novel	5202	14	NA	NA	-544	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3176498993313	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCAACAGTTTTATATA	NA	False	NA	-9	True	AATAAA	-16	NA	17978597	17892069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17893497_17893940_17894382_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.12	chr13	-	4182	15	NNC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	172	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	19.8231981192105	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGATGCAACAGTTTTA	NA	False	NA	-13	True	AATAAA	-12	NA	17979510	17892073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022_17978406_17979425
ES.8758.13	chr13	-	4826	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	144	7578	144	-433	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGCTTAAATTCATGCT	NA	False	NA	NA	False	NA	NA	NA	17979538	17892477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.14	chr13	-	5149	15	NNC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-155	-457	intron_retention	FALSE	canonical	1	1	junction_3	23.8645198175544	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	17979837	17892501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17893497_17893940_17894211_17895672_17895879_17897730_17897779_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.15	chr13	-	4041	12	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-717	3604	-271	-1269	5prime_fragment	FALSE	canonical	3	43	junction_8	11.2072880655904	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATGAACTGGGCATT	NA	False	NA	NA	False	AAAACA	-10	NA	17979953	17895583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.16	chr13	-	176	1	Intergenic	novelGene_7198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	17903966	17903790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_17903800_17904000
ES.8758.17	chr13	-	3407	10	Fusion	ENSMUSG00000041297.9_ENSMUSG00000113432.2	novel	1062	3	NA	NA	89	10	intron_retention	FALSE	canonical	1	1	junction_1	22.1365013350806	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGTCTAGTCTTTCA	NA	False	NA	NA	False	AATAAA	-26	NA	17979593	17910559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_17910830_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.18	chr13	-	4717	10	Fusion	ENSMUSG00000041297.9_ENSMUSG00000113432.2	novel	1062	3	NA	NA	146	0	intron_retention	FALSE	canonical	1	1	junction_1	22.1365013350806	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCACAAATGTAACAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	17979536	17910569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_17912207_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.19	chr13	-	4933	11	Fusion	ENSMUSG00000041297.9_ENSMUSG00000113432.2	novel	1062	3	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_5	30.3776233435073	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTCACAAATGTAACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	17979698	17910570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_17912207_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17927655_17927711_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.2	chr13	-	7143	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-512	-1429	-66	1429	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTGTGTTTGGATAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	17979748	17890550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.20	chr13	-	7721	9	NNC	ENSMUSG00000041297.9	novel	1062	3	NA	NA	92	-16249	intron_retention	TRUE	non_canonical	0	0	junction_1	29.6476706504912	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTCAGTGTTTGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	17979590	17918751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17922130_17923292_17923355_17923514_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.21	chr13	-	4978	8	NNC	ENSMUSG00000041297.9	novel	1062	3	NA	NA	-104	19125	intron_retention	FALSE	non_canonical	0	0	junction_1	25.2610856651014	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTTGTTTGTTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	17979786	17921692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17922139_17923459_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.22	chr13	-	4187	7	NNC	ENSMUSG00000041297.9	novel	1062	3	NA	NA	-22458	19123	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.9866631092136	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTTTGTTTGTTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	17947330	17921694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17923326_17923459_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885
ES.8758.23	chr13	-	5578	6	NIC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-256	16910	intron_retention	FALSE	canonical	3	43	junction_3	14.0370937162933	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTTGTTTAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	17979938	17923907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_17924899_17926255_17926446_17937688_17937860_17939538_17941192_17946885_17947543_17978022
ES.8758.24	chr13	-	4232	7	ISM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-703	31933	-257	16905	5prime_fragment	FALSE	canonical	3	43	junction_3	13.208793367383	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTATTTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	17979939	17923912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.25	chr13	-	3863	8	NNC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-240	16892	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	25.2610856651014	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTAGCTTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	17979922	17923925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022_17978765_17979103
ES.8758.27	chr13	-	3410	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1674	-674	-45	674	multi-exon	FALSE	canonical	3	79	junction_2	1	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTAGTCAGTTTCTT	NA	False	NA	NA	False	TATAAA	-13	NA	17979727	17940143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17941192_17946885_17947543_17978022
ES.8758.28	chr13	-	2990	3	FSM	ENSMUSG00000041297.9	ENSMUST00000222848.2	1062	3	-1928	0	-299	0	multi-exon	FALSE	canonical	3	79	junction_2	1	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACAGTTTGTAATTATTA	NA	False	NA	NA	False	AATAAA	-16	NA	17979981	17940817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17941192_17946885_17947543_17978022
ES.8758.29	chr13	-	1732	1	NIC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-23017	1279	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATAATTTTGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	17947889	17946157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_17946200_17947900
ES.8758.3	chr13	-	6673	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-111	5986	-111	1094	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTATTTTTTGATCGT	NA	False	NA	NA	False	ATTAAA	-18	NA	17979793	17890885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.4	chr13	-	6934	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-641	-1091	-195	1091	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATTTTATTTTTTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	17979877	17890888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.5	chr13	-	5743	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-277	7082	-277	-2	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATAGTGGTTTTTATAT	NA	False	NA	79	True	AATACA	-17	NA	17979959	17891981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.6	chr13	-	5932	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	-785	55	-339	10	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGTTTTGTTTTTTT	NA	False	NA	26	True	TATAAA	-14	NA	17980021	17892034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ES.8758.7	chr13	-	5234	15	NNC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-238	-17	intron_retention	FALSE	non_canonical	0	0	junction_2	23.6211596597938	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTTTATATAAAAAATGG	NA	False	NA	-1	True	AATAAA	-24	NA	17979920	17892061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17893497_17893940_17894211_17895674_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022_17979473_17979860
ES.8758.8	chr13	-	4343	15	NNC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	144	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.6211596597938	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAGTTTTATATAAAAAA	NA	False	NA	-4	True	AATAAA	-21	NA	17979538	17892064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_17893497_17893940_17894211_17895668_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022_17978551_17979450
ES.8758.9	chr13	-	6768	13	NIC	ENSMUSG00000041297.9	novel	12548	14	NA	NA	-45	-22	intron_retention	FALSE	canonical	3	30	junction_2	13.8021737418423	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAACAGTTTTATATAAAA	NA	False	NA	-6	True	AATAAA	-19	NA	17979727	17892066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17941192_17946885_17947543_17978022
ES.8759.1	chr13	+	209	1	Intergenic	novelGene_7200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCCAGGAACCTTAA	NA	False	NA	NA	False	AGTAAA	-37	NA	17980417	17980626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_17980400_17980600
ES.876.1	chr1	+	214	1	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84899728	84899942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_84899700_84899900
ES.8760.1	chr13	+	6886	1	Genic_Genomic	ENSMUSG00000113100.2	novel	NA	NA	NA	NA	763	1600	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAACCCAAAACAAACAAAC	5909	False	NA	NA	False	NA	NA	NA	18107733	18114619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_18107700_18114600
ES.8761.1	chr13	-	2676	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	12	0	12	0	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTTCATTGATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	18118812	18055155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.10	chr13	-	798	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	10	1880	10	-1880	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAATGGAAAAAA	NA	False	NA	5	True	NA	NA	NA	18118814	18057035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.11	chr13	-	6773	1	Intergenic	novelGene_7201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAACCTTGAATTTAGAA	NA	False	NA	NA	False	NA	NA	NA	18090664	18083891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_18083900_18090700
ES.8761.12	chr13	-	978	1	NIC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	41	-54628	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGACTAACAGATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	18118783	18117805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_18117800_18118800
ES.8761.2	chr13	-	2685	5	NNC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	25	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	395.822798105415	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTGGTGTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	18118799	18055162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18057116_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.3	chr13	-	2826	6	NNC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	37	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	438.257732390428	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTGGTGTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	18118787	18055162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18075338_18075521_18118601
ES.8761.4	chr13	-	3018	7	NNC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	17	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	413.661462497482	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTGGTGTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	18118807	18055162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18057087_18063091_18063267_18066307_18066486_18067706_18067916_18071537_18071688_18088099_18088276_18118601
ES.8761.5	chr13	-	1396	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	16	1276	16	-1276	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGCATATTAATTACC	NA	False	NA	-4	True	AGTAAA	-21	NA	18118808	18056431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.6	chr13	-	1246	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	17	1425	17	-1425	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCTTGGTCTTCTAC	NA	False	NA	NA	False	TATAAA	-22	NA	18118807	18056580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.7	chr13	-	937	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	10	1741	10	-1741	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGGCTCAATTGACTG	NA	False	NA	-20	True	AATAAA	-21	NA	18118814	18056896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ES.8761.8	chr13	-	5370	4	NIC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	17	-1741	intron_retention	FALSE	canonical	3	817	junction_1	49.886537930254	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGGCTCAATTGACTG	NA	False	NA	-20	True	AATAAA	-21	NA	18118807	18056896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_18057087_18063091_18067916_18071537_18071688_18118601
ES.8761.9	chr13	-	4561	4	NIC	ENSMUSG00000008859.9	novel	2688	5	NA	NA	7	-1742	intron_retention	FALSE	canonical	3	817	junction_1	41.2499158248299	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGGCTCAATTGACT	NA	False	NA	-21	True	AATAAA	-20	NA	18118817	18056897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_18057087_18063091_18063267_18067706_18071688_18118601
ES.8762.1	chr13	+	2005	1	FSM	ENSMUSG00000113528.2	ENSMUST00000221728.2	1988	1	-32	15	-32	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAAGCAACACATT	NA	False	NA	NA	False	AATAAA	-17	NA	18118843	18120848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18118800_18120800
ES.8763.1	chr13	+	1849	1	FSM	ENSMUSG00000113750.2	ENSMUST00000222318.2	1049	1	-260	-540	-260	540	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACCTCCAACTCCTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	18124232	18126081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18124200_18126100
ES.8764.1	chr13	-	3412	4	NNC	ENSMUSG00000075054.6	novel	8744	3	NA	NA	1	21933	intron_retention	TRUE	non_canonical	0	0	junction_1	234.188433152071	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTTAGTTAACCTCCAA	NA	False	NA	NA	False	NA	NA	NA	18167912	18133981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18133990_18161232_18164368_18166212_18166335_18167765
ES.8764.10	chr13	-	1872	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	1	6871	1	634	multi-exon	FALSE	canonical	3	467	junction_2	27.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCTACATTGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	18167933	18162785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.11	chr13	-	897	4	NIC	ENSMUSG00000113030.2	novel	558	5	NA	NA	-811	-27051	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	225.274647190195	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCTACATTGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	18167929	18162785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_18163191_18164161_18164368_18166212_18166335_18167765
ES.8764.12	chr13	-	3288	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	-230	-634	-5	634	intron_retention	FALSE	canonical	3	522	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGCTCTACATTGTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	18167918	18162785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_18164368_18166212
ES.8764.13	chr13	-	1325	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	14	7405	-7	100	multi-exon	FALSE	canonical	3	467	junction_2	27.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAATTTTACTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	18167920	18163319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.14	chr13	-	1214	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	4	7526	4	-21	multi-exon	FALSE	canonical	3	467	junction_2	27.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTGAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	18167930	18163440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.15	chr13	-	1311	3	FSM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	9	62	9	-62	multi-exon	FALSE	canonical	1	2	junction_2	260	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATTTATGTATTTATGA	NA	False	NA	NA	False	AATAAA	-20	NA	18167679	18163481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167376
ES.8764.16	chr13	-	4441	1	FSM	ENSMUSG00000075054.6	ENSMUST00000222595.2	2749	1	-16	-1676	5	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGACCTATTTATGTA	NA	False	NA	NA	False	AATAAA	-13	NA	18167929	18163488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18163500_18167900
ES.8764.17	chr13	-	2555	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	-201	70	24	-70	intron_retention	FALSE	canonical	3	522	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGACCTATTTATGT	NA	False	NA	NA	False	AATAAA	-12	NA	18167889	18163489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_18164368_18166212
ES.8764.18	chr13	-	1033	4	NNC	ENSMUSG00000075054.6	novel	8744	3	NA	NA	12	-250	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	246.073159852919	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTGGAATCAGG	NA	False	NA	NA	False	AATAAA	-16	NA	18167901	18163669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18164368_18166212_18166335_18166577_18166655_18167765
ES.8764.19	chr13	-	175	1	FSM	ENSMUSG00000075054.6	ENSMUST00000222595.2	2749	1	1803	771	1578	-477	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAGAAAAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	18166110	18165935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18165900_18166100
ES.8764.2	chr13	-	4151	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	11	4582	-10	2923	multi-exon	FALSE	canonical	3	467	junction_2	27.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTTGTTTTCTGCAT	NA	False	NA	NA	False	AATAGA	-18	NA	18167923	18160496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.4	chr13	-	3440	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	-5	5309	-5	2196	multi-exon	FALSE	canonical	3	467	junction_2	27.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTTTGCTGTCTAGA	NA	False	NA	NA	False	AATAAA	-25	NA	18167939	18161223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.5	chr13	-	4860	2	ISM	ENSMUSG00000075054.6	ENSMUST00000222796.2	1382	3	-242	-2194	4	2194	intron_retention	FALSE	canonical	3	522	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGACTTTGCTGTCTA	NA	False	NA	NA	False	AATAAA	-23	NA	18167930	18161225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_18164368_18166212
ES.8764.6	chr13	-	3669	4	NNC	ENSMUSG00000075054.6	novel	8744	3	NA	NA	-8	2191	intron_retention	FALSE	canonical	0	0	junction_2	246.073159852919	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTCAAGACTTTGCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	18167696	18161228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_18164368_18166212_18166335_18166577_18166655_18167365
ES.8764.7	chr13	-	3284	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	1	5459	1	2046	multi-exon	FALSE	canonical	3	467	junction_2	27.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTAAGGTTTTTATTG	NA	False	NA	NA	False	GATAAA	-26	NA	18167933	18161373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.8	chr13	-	2519	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	23	6202	2	1303	multi-exon	FALSE	canonical	3	467	junction_2	27.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGATAAATTCCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	18167911	18162116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8764.9	chr13	-	2280	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	16	6448	-5	1057	multi-exon	FALSE	canonical	3	467	junction_2	27.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACATAAGTGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	18167918	18162362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_18164368_18166212_18166335_18167765
ES.8765.1	chr13	-	176	1	Intergenic	novelGene_7202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18632931	18632755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_18632800_18632900
ES.8766.1	chr13	+	161	1	Intergenic	novelGene_7203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	8751	False	NA	NA	False	NA	NA	NA	18726434	18726595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_18726400_18726600
ES.8767.1	chr13	+	183	1	Intergenic	novelGene_7204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	18738340	18738523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_18738300_18738500
ES.8768.1	chr13	+	176	1	Intergenic	novelGene_7205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCTGAGAGCAGAGTTGG	NA	False	NA	NA	False	NA	NA	NA	18775784	18775960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_18775800_18776000
ES.8769.1	chr13	+	3280	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	-19	-62	-15	62	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTGGTTGATAAGT	NA	False	NA	85	True	AATAGA	-18	NA	18901440	19051043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.11	chr13	+	5824	26	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-6	intron_retention	FALSE	canonical	0	0	junction_10	117.873830853163	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATCCTTTATTGTGTT	NA	False	NA	17	True	AATAAA	-16	NA	18901469	19050975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19048283_19050289
ES.8769.13	chr13	+	3107	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	115.082376412586	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.14	chr13	+	4567	27	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-7	intron_retention	FALSE	canonical	0	0	junction_5	151.177161051756	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901469	19050974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975762_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.15	chr13	+	3407	31	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	165.185269722616	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901469	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18950573_18950668_18952426_18952559_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.19	chr13	+	2522	11	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	1228	intron_retention	FALSE	canonical	0	0	junction_8	152.870173676882	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	18901469	19013547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18998396_18998464_19007949_19008048_19011773
ES.8769.2	chr13	+	3018	27	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	9	-10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	116.461951274545	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGAATCCTTTATTG	NA	False	NA	13	True	AATAAA	-12	NA	18901468	19050971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929507_18978517_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.20	chr13	+	2328	21	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	131.327177309192	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901469	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923641_19011836_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.21	chr13	+	2998	27	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	115.817246623224	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901469	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.23	chr13	+	2520	22	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.914990903956	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGAATCCTTTATTG	NA	False	NA	13	True	AATAAA	-12	NA	18901469	19050971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907402_18998406_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.24	chr13	+	4984	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	10	-1795	10	1795	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATTGTACTGAGTTTT	NA	False	NA	NA	False	NA	NA	NA	18901469	19052776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.25	chr13	+	3049	27	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	11	-10	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	116.078560675608	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGAATCCTTTATTG	NA	False	NA	13	True	AATAAA	-12	NA	18901470	19050971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.27	chr13	+	764	9	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	17	55057	17	-15901	5prime_fragment	FALSE	canonical	3	441	junction_1	46.589799044426	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGTACTCATGACTG	NA	False	NA	NA	False	ATTAAA	-16	NA	18901476	18995924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736
ES.8769.28	chr13	+	564	5	NNC	ENSMUSG00000041236.9	novel	1183	5	NA	NA	18	-2860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	228.918107628034	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGATTTTTTT	NA	False	NA	NA	False	GATAAA	-12	NA	18901477	18930309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18929996
ES.8769.29	chr13	+	3166	29	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	18	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	113.237125906981	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901477	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025414_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.3	chr13	+	3045	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	9	145	9	-145	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTTCAGTGACATGTGG	NA	False	NA	NA	False	ATTAAA	-28	NA	18901468	19050836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.31	chr13	+	2912	27	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	116.910525642122	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATTGTGTTGCAA	NA	False	NA	21	True	AATAAA	-20	NA	18901477	19050979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.32	chr13	+	3853	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	19	-673	19	673	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACCCAGCCTCTCTAA	NA	False	NA	NA	False	TATAAA	-31	NA	18901478	19051654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.33	chr13	+	3204	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	19	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.542152637575	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATCCTTTATTGTGTT	NA	False	NA	17	True	AATAAA	-16	NA	18901478	19050975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18905511_18905542_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.34	chr13	+	2784	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	20	395	20	-395	multi-exon	FALSE	canonical	3	419	junction_25	60.5186237990473	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	18901479	19050586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.35	chr13	+	3233	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	21	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	143.165537008459	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	18901480	19050974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18992566_18992629_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.36	chr13	+	2989	27	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	149.656534780032	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901481	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.37	chr13	+	4794	29	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-8	intron_retention	FALSE	canonical	2	3	junction_7	145.170694743274	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901481	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18992492_18992629_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.38	chr13	+	3932	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.31045268988	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901481	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18901860_18902624_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.39	chr13	+	4567	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-8	intron_retention	FALSE	canonical	3	419	junction_24	60.7534991117465	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901481	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.4	chr13	+	2692	12	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	9	37412	9	1250	intron_retention	FALSE	canonical	3	433	junction_10	47.5288516118072	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATAGTAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	18901468	19013569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773
ES.8769.40	chr13	+	3071	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-8	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	114.216109266216	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901481	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.41	chr13	+	3252	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	143.31045268988	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGAATCCTTTATTG	NA	False	NA	13	True	AATAAA	-12	NA	18901481	19050971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18901860_18901946_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.43	chr13	+	3207	27	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.509256407352	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTTTATTGTGTTGCA	NA	False	NA	20	True	AATAAA	-19	NA	18901481	19050978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901723_18907357_18907397_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.44	chr13	+	2844	25	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	23	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	120.374156279494	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901482	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907415_18978517_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.45	chr13	+	3333	29	NNC	ENSMUSG00000041236.9	novel	629	2	NA	NA	74	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	145.926211434661	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTTTATTGTGTTGC	NA	False	NA	19	True	AATAAA	-18	NA	18901533	19050977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901723_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025417_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.47	chr13	+	3148	28	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	5894	8	5894	-8	3prime_fragment	FALSE	canonical	3	419	junction_24	59.8592542177121	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18907353	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.49	chr13	+	2854	26	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	27970	156	27970	-156	3prime_fragment	FALSE	canonical	3	419	junction_22	60.5286576755176	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAACTGACACTCCTTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	18929429	19050825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.50	chr13	+	4489	1	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	8862	-34462	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	18972874	18977363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18972900_18977400
ES.8769.51	chr13	+	2848	24	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	74295	9	11742	-9	3prime_fragment	FALSE	canonical	3	419	junction_20	62.420247793433	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGAATCCTTTATTGT	NA	False	NA	14	True	AATAAA	-13	NA	18975754	19050972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.53	chr13	+	2900	22	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	92960	8	-13545	-8	3prime_fragment	FALSE	canonical	3	419	junction_18	63.6453110887422	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18994419	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.54	chr13	+	3158	3	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	95740	37412	-10765	1250	intron_retention	FALSE	canonical	3	433	junction_1	7.5	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATAGTAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	18997199	19013569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_18998464_19007949_19008048_19011773
ES.8769.55	chr13	+	3731	15	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	6501	-8	intron_retention	FALSE	canonical	3	419	junction_12	65.5124618149954	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	19014465	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19048283_19050289
ES.8769.56	chr13	+	1927	14	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	122356	4	-5217	-4	3prime_fragment	FALSE	canonical	3	419	junction_10	60.9789953166046	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTTTATTGTGTTGC	NA	False	NA	19	True	AATAAA	-18	NA	19023815	19050977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.57	chr13	+	1803	12	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	124806	8	-2767	-8	3prime_fragment	FALSE	canonical	3	419	junction_8	63.056055345244	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	19026265	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.58	chr13	+	1635	11	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	-2738	-2	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	170.978244230077	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATTGTGTTGCAA	NA	False	NA	21	True	AATAAA	-20	NA	19026294	19050979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19026451_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.59	chr13	+	2429	12	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	124861	-673	-2712	673	3prime_fragment	FALSE	canonical	3	419	junction_8	63.056055345244	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTACCCAGCCTCTCTAA	NA	False	NA	NA	False	TATAAA	-31	NA	19026320	19051654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.6	chr13	+	4677	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	9	-2	intron_retention	FALSE	canonical	3	419	junction_24	61.62600149577	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATTGTGTTGCAA	NA	False	NA	21	True	AATAAA	-20	NA	18901468	19050979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.60	chr13	+	993	5	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	12924	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	252.387598744471	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	19041956	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19042041_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.61	chr13	+	5157	3	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	14676	-8	intron_retention	FALSE	canonical	3	554	junction_1	33.5	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	19043708	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19046807_19046907_19048283_19050289
ES.8769.62	chr13	+	2825	2	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	17110	-7	intron_retention	FALSE	canonical	3	621	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAATCCTTTATTGTGT	NA	False	NA	16	True	AATAAA	-15	NA	19046142	19050974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19048283_19050289
ES.8769.7	chr13	+	5200	26	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	9	-4405	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	114.356886981065	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTTACTTGACAGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	18901468	19046576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19043649
ES.8769.8	chr13	+	3144	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-6	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	112.861411548568	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATCCTTTATTGTGTT	NA	False	NA	17	True	AATAAA	-16	NA	18901469	19050975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_18901507_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.8769.9	chr13	+	3317	30	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	10	-8	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_7	142.818028618428	462	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	False	NA	15	True	AATAAA	-14	NA	18901469	19050973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18992492_18992629_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ES.877.1	chr1	-	5594	5	NIC	ENSMUSG00000026220.7	novel	3207	5	NA	NA	35	2275	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	3.96074487943871	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTCAGTGATGTTTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	84912820	84881343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912433
ES.877.2	chr1	-	5442	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	35	-2270	35	2270	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGTGGTCAGTGATGT	NA	False	NA	-9	True	AATAAA	-12	NA	84912820	84881348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
ES.877.3	chr1	-	3799	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-72	-520	-72	520	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGTTCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	84912927	84883098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
ES.877.4	chr1	-	6448	4	ISM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	-72	1597	-72	-1597	5prime_fragment	FALSE	canonical	2	5	junction_2	2.82842712474619	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTCTTAAACTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	84912927	84885215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_84890895_84900574_84900719_84907007_84907286_84912580
ES.877.5	chr1	-	2804	1	Genic_Genomic	ENSMUSG00000026220.7	novel	NA	NA	NA	NA	-64	-3061	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	84912919	84910115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_84910100_84912900
ES.8770.1	chr13	-	3399	1	Antisense	novelGene_ENSMUSG00000041236.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCACATCTTAAAGTC	NA	False	NA	NA	False	NA	NA	NA	18999438	18996039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_18996000_18999400
ES.8771.1	chr13	+	3274	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	90	3	-56	-3	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19132464	19335088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.10	chr13	+	629	5	ISM	ENSMUSG00000021314.14	ENSMUST00000200273.2	1756	9	-23	14833	-23	-14833	5prime_fragment	FALSE	canonical	3	55	junction_2	6.83282518435822	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAAGTGGCCTCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	19132544	19270963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692
ES.8771.11	chr13	+	3197	18	NNC	ENSMUSG00000021314.14	novel	3224	21	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	18.2726372851978	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTCTTTTTCAAG	NA	False	NA	15	True	AATAAA	-20	NA	19132553	19335087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19305362_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.12	chr13	+	3054	20	NIC	ENSMUSG00000021314.14	novel	3367	21	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	14.1794982896135	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGGGTTCTTTTTCAAG	NA	False	NA	15	True	AATAAA	-20	NA	19132560	19335087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.13	chr13	+	2926	21	NNC	ENSMUSG00000021314.14	novel	3367	21	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	18.6831474864381	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACATGGGTTCTTTTTCA	NA	False	NA	13	True	AATAAA	-18	NA	19132566	19335085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19321705_19321913_19323341_19323415_19323534_19323603_19326134_19326237_19333905
ES.8771.14	chr13	+	2519	1	Intergenic	novelGene_7206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	AATAAA	-33	NA	19163942	19166461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_19163900_19166500
ES.8771.15	chr13	+	3400	5	ISM	ENSMUSG00000021314.14	ENSMUST00000222698.2	3082	20	58682	-3	3710	3	3prime_fragment	FALSE	canonical	3	63	junction_1	3.76662979332984	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACATGGGTTCTTTTTCA	2520	False	NA	13	True	AATAAA	-18	NA	19307668	19335085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.16	chr13	+	2061	4	ISM	ENSMUSG00000021314.14	ENSMUST00000222698.2	3082	20	72404	1	17432	-1	3prime_fragment	FALSE	canonical	3	65	junction_2	3.29983164553722	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTACATGGGTTCTTT	NA	False	NA	9	True	AATAAA	-14	NA	19321390	19335081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.17	chr13	+	4252	3	NIC	ENSMUSG00000021314.14	novel	3082	20	NA	NA	17780	-3	intron_retention	FALSE	canonical	3	68	junction_1	2.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19321738	19335088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19321913_19323341_19326237_19333905
ES.8771.18	chr13	+	1599	4	NNC	ENSMUSG00000021314.14	novel	3760	21	NA	NA	19177	1	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	28.4722086720835	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACATGGGTTCTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	19323135	19335083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19323194_19323341_19323603_19326134_19326237_19333905
ES.8771.2	chr13	+	3209	20	NNC	ENSMUSG00000021314.14	novel	3367	21	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	16.3492017814928	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19132523	19335088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300444_19304760_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.3	chr13	+	1435	3	NNC	ENSMUSG00000021314.14	novel	1756	9	NA	NA	3	-136418	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTGGACCTTCAT	NA	False	NA	NA	False	NA	NA	NA	19132523	19149378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19132672_19141821_19142151_19148420
ES.8771.5	chr13	+	3099	22	NNC	ENSMUSG00000021314.14	novel	3224	21	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	16.1775859050195	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACATGGGTTCTTTTT	NA	False	NA	11	True	AATAAA	-16	NA	19132526	19335083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323415_19323534_19323603_19326134_19326237_19333905
ES.8771.6	chr13	+	3101	20	NIC	ENSMUSG00000021314.14	novel	3760	21	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	15.1494859717337	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19132526	19335088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.7	chr13	+	3224	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	6	-6	6	-3	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTTCTTTTTCAAGA	NA	False	NA	16	True	AATAAA	-21	NA	19132526	19335088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8771.8	chr13	+	4965	2	NNC	ENSMUSG00000021314.14	novel	1756	9	NA	NA	6	-148267	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTCTCCTTGCACA	NA	False	NA	NA	False	NA	NA	NA	19132526	19137529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_19133548_19133585
ES.8771.9	chr13	+	6326	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	152	-3111	6	3111	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTGTGAATTCCTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	19132526	19338202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ES.8772.1	chr13	+	1963	1	Intergenic	novelGene_7207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACATAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19558171	19560134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_19558200_19560100
ES.8773.1	chr13	+	127	1	Intergenic	novelGene_7208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	19572167	19572294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_19572200_19572300
ES.8773.2	chr13	+	7316	1	Antisense	novelGene_ENSMUSG00000003062.14_AS_novelGene_ENSMUSG00000105848.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGGCAGGATGAGTGGG	NA	False	NA	NA	False	AAAAAG	-39	NA	19572167	19579483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_19572200_19579500
ES.8774.1	chr13	-	1344	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	-16	-1	-16	1	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTGTTGTCTGTATT	NA	False	NA	1	True	AATAAA	-20	NA	19579981	19541844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.10	chr13	-	1344	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	322.231455806399	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579932	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19549458_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.11	chr13	-	1344	9	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	262.637077304405	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579929	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19551913_19552070_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.12	chr13	-	995	8	NIC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	287.472163692346	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579923	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19579873
ES.8774.13	chr13	-	1516	11	NNC	ENSMUSG00000003062.14	novel	1391	10	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	360.637990233974	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579933	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19578101_19578205_19579873
ES.8774.14	chr13	-	1390	8	FSM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	2	-318	2	-4	multi-exon	FALSE	canonical	3	699	junction_7	61.3454587245254	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579923	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.15	chr13	-	3742	8	NNC	ENSMUSG00000003062.14	novel	1030	8	NA	NA	2	-4	intron_retention	FALSE	canonical	0	0	junction_2	350.017900416886	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579923	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19549331_19552010_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.16	chr13	-	4262	9	NNC	ENSMUSG00000003062.14	novel	1391	10	NA	NA	-3	-6	intron_retention	FALSE	canonical	0	0	junction_7	374.53719358029	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGATGATTGTGTGT	NA	False	NA	-9	True	AATAAA	-10	NA	19579932	19541854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19551913_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19578101_19578205_19579646
ES.8774.17	chr13	-	3532	7	ISM	ENSMUSG00000003062.14	ENSMUST00000221380.2	1268	9	-7	7281	-7	-1	5prime_fragment	FALSE	canonical	3	699	junction_6	64.2719914806511	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTCATGCCCCTGCTT	NA	False	NA	-4	True	AATAAA	-17	NA	19579911	19549126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.18	chr13	-	3665	6	ISM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	-7	6956	-3	-1	5prime_fragment	FALSE	canonical	3	699	junction_5	67.9452720945321	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTCATGCCCCTGCTT	NA	False	NA	-4	True	AATAAA	-17	NA	19579932	19549126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.19	chr13	-	1270	9	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	340.955069437309	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTGTCATGCCCCTGC	NA	False	NA	-6	True	AATAAA	-15	NA	19579926	19549128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19549516_19549601_19549725_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.2	chr13	-	11354	8	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-2	0	intron_retention	TRUE	non_canonical	0	0	junction_2	350.017900416886	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579927	19541845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19546131_19546213_19547369_19548434_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.20	chr13	-	1153	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	-28	3	-3	-3	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTGTCATGCCCCTGC	NA	False	NA	-6	True	AATAAA	-15	NA	19579932	19549128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.21	chr13	-	3300	1	NIC	ENSMUSG00000003062.14	novel	1391	10	NA	NA	-303	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTGTCATGCCCCTGC	NA	False	NA	-6	True	AATAAA	-15	NA	19552428	19549128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19549100_19552400
ES.8774.22	chr13	-	1394	10	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	396.240044467374	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTGTCATGCCCCTGC	NA	False	NA	-6	True	AATAAA	-15	NA	19579925	19549128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19549516_19549601_19549725_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ES.8774.23	chr13	-	3631	8	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	-7	-5	intron_retention	FALSE	canonical	3	24	junction_7	359.433056978597	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTGTCATGCCCCT	NA	False	NA	-8	True	AATAAA	-13	NA	19579911	19549130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
ES.8774.24	chr13	-	5305	1	NIC	ENSMUSG00000003062.14	novel	1391	10	NA	NA	-2967	-662	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGAAACTATTACA	NA	False	NA	NA	False	NA	NA	NA	19555092	19549787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19549800_19555100
ES.8774.3	chr13	-	3806	7	NIC	ENSMUSG00000003062.14	novel	1074	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	699	junction_6	55.5660267909568	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTGTGTGTTGTCTGTA	NA	False	NA	-1	True	AATAAA	-18	NA	19579923	19541846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19542300_19543147_19543222_19551913_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.4	chr13	-	1437	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-14	-4	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	323.803705207604	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579979	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19578101_19578205_19579873
ES.8774.5	chr13	-	5863	6	NIC	ENSMUSG00000003062.14	novel	1074	8	NA	NA	-3	-4	intron_retention	FALSE	canonical	3	699	junction_5	60.8295980588397	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579932	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19542300_19543147_19543222_19551913_19556836_19557305_19557384_19560548_19560832_19579873
ES.8774.6	chr13	-	1503	9	NIC	ENSMUSG00000003062.14	novel	1391	10	NA	NA	-7	-4	intron_retention	FALSE	canonical	3	23	junction_8	334.668469346905	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579911	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ES.8774.7	chr13	-	1423	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	-39	7	9	-4	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579943	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ES.8774.8	chr13	-	1494	10	NNC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	322.658669934577	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGATTGTGTGTTG	NA	False	NA	-7	True	AATAAA	-12	NA	19579955	19541852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19542300_19543147_19543222_19549331_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ES.8775.1	chr13	-	2373	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	-22	12	-22	-12	multi-exon	FALSE	canonical	3	59	junction_2	5.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTTATCTTCAGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	19803996	19775887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19777519_19778616_19778826_19803463
ES.8775.2	chr13	-	2211	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	27	125	11	-125	multi-exon	FALSE	canonical	3	59	junction_2	5.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTATTCTTTGATGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	19803947	19776000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19777519_19778616_19778826_19803463
ES.8775.3	chr13	-	2319	3	NNC	ENSMUSG00000002808.8	novel	2363	3	NA	NA	19	-125	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTATTCTTTGATGTG	NA	False	NA	NA	False	ATTAAA	-18	NA	19803939	19776000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_19777519_19778500_19778826_19803463
ES.8775.4	chr13	-	1005	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	27	1331	11	88	multi-exon	FALSE	canonical	3	59	junction_2	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGGCTTGCTTGTAC	NA	False	NA	NA	False	AATAAA	-23	NA	19803947	19777206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_19777519_19778616_19778826_19803463
ES.8776.1	chr13	+	2104	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	-348	8	-277	-4	multi-exon	FALSE	canonical	2	8	junction_1	1.72046505340853	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATCTTCATGTGTTTG	NA	False	NA	NA	False	GATAAA	-20	NA	19806996	19816991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
ES.8776.2	chr13	+	4147	5	FSM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	-271	173	-271	-4	multi-exon	FALSE	canonical	3	8	junction_1	1.80277563773199	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATCTTCATGTGTTTG	NA	False	NA	NA	False	GATAAA	-20	NA	19807002	19816991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235
ES.8776.4	chr13	+	3979	4	NIC	ENSMUSG00000021319.8	novel	4049	5	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	8	junction_1	2.05480466765633	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGATCTTCATGTGTT	NA	False	NA	NA	False	ATTAAA	-45	NA	19807253	19816989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_19808048_19809197_19809430_19811275_19811475_19814235
ES.8776.5	chr13	+	2128	1	ISM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	7478	285	5827	9	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTTTTGACAAAAAAT	NA	False	NA	NA	False	TATAAA	-21	NA	19814751	19816879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_19814800_19816900
ES.8777.1	chr13	-	7637	1	Genic_Genomic	ENSMUSG00000041138.17	novel	NA	NA	NA	NA	30544	7527	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCCAGCATCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	19829357	19821720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_19821700_19829400
ES.8778.1	chr13	+	187	1	Intergenic	novelGene_7209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGGCTATACTCAACA	NA	False	NA	NA	False	NA	NA	NA	19972529	19972716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_19972500_19972700
ES.8779.1	chr13	-	2236	1	Intergenic	novelGene_7210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGCTTGTGTACTAAA	NA	False	NA	NA	False	AATAAA	-9	NA	20048333	20046097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20046100_20048300
ES.878.1	chr1	-	304	1	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAGAAGAACT	NA	False	NA	NA	False	NA	NA	NA	84939272	84938968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84939000_84939300
ES.8780.1	chr13	-	185	1	Intergenic	novelGene_7211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATATAAATAAATATAA	NA	False	NA	NA	False	NA	NA	NA	20149446	20149261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20149300_20149400
ES.8781.1	chr13	+	201	1	Intergenic	novelGene_7214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACAGTTTTGTGAATT	NA	False	NA	NA	False	AATACA	-6	NA	20197718	20197919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_20197700_20197900
ES.8782.1	chr13	-	693	2	Intergenic	novelGene_7212	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCATGTCATAGCTTAC	NA	False	NA	NA	False	NA	NA	NA	20200673	20190718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20191327_20200588
ES.8782.2	chr13	-	5175	1	Intergenic	novelGene_7213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGAATTCAGTGCTTT	NA	False	NA	NA	False	NA	NA	NA	20200693	20195518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20195500_20200700
ES.8783.1	chr13	+	178	1	Intergenic	novelGene_7215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCATTTTATT	NA	False	NA	NA	False	NA	NA	NA	20217546	20217724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_20217500_20217700
ES.8784.1	chr13	+	175	1	Intergenic	novelGene_7217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGACAACAATGA	NA	False	NA	NA	False	NA	NA	NA	20228164	20228339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_20228200_20228300
ES.8785.1	chr13	-	1170	2	Intergenic	novelGene_7216	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTTCCGCATGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	20229095	20218844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20219904_20228984
ES.8786.1	chr13	+	3837	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-196	1823	-173	-1823	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGGTGTTTTGATTTA	NA	False	NA	10	True	AATAAA	-20	NA	20274592	20790700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.10	chr13	+	2520	8	NNC	ENSMUSG00000041112.18	novel	5464	22	NA	NA	-44812	-1832	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	21.6578213237111	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGGGGAGCTGGTGT	6634	False	NA	1	True	AATAAA	-11	NA	20612083	20790691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_20612500_20633639_20633784_20748602_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.11	chr13	+	2181	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	356	-1826	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGGTGTTTTGAT	NA	False	NA	7	True	AATAAA	-17	NA	20657251	20790697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.5	chr13	+	3628	22	NNC	ENSMUSG00000041112.18	novel	5464	22	NA	NA	1	-1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6270464270502	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTTGGGGAGCTGGTG	NA	False	NA	0	True	AATAAA	-10	NA	20274789	20790690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_20274946_20369529_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.6	chr13	+	3724	23	NNC	ENSMUSG00000041112.18	novel	5464	22	NA	NA	5	-1828	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.2724159365727	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGGAGCTGGTGTTTTG	NA	False	NA	5	True	AATAAA	-15	NA	20274793	20790695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_20274942_20303270_20303364_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.7	chr13	+	3777	22	NNC	ENSMUSG00000041112.18	novel	1087	9	NA	NA	-487	-1826	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	10.744402117882	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGAGCTGGTGTTTTGAT	NA	False	NA	7	True	AATAAA	-17	NA	20368889	20790697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_20369182_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.8	chr13	+	3615	22	NNC	ENSMUSG00000041112.18	novel	1087	9	NA	NA	-195	-1824	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6270464270502	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTGGTGTTTTGATTT	NA	False	NA	9	True	AATAAA	-19	NA	20369181	20790699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_20369310_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8786.9	chr13	+	3651	21	ISM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	94568	1827	-20	-1827	3prime_fragment	FALSE	canonical	2	20	junction_14	9.21628992599517	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGAGCTGGTGTTTTGA	NA	False	NA	6	True	AATAAA	-16	NA	20369356	20790696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ES.8787.1	chr13	-	192	1	Intergenic	novelGene_7218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	20419716	20419524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_20419500_20419700
ES.8788.1	chr13	+	164	1	Intergenic	novelGene_7219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTATGATTTAA	2140	False	NA	NA	False	NA	NA	NA	20905194	20905358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_20905200_20905400
ES.8789.1	chr13	-	2332	3	Antisense	novelGene_ENSMUSG00000113168.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTAGATTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	20933018	20930488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_20932199_20932238_20932767_20932924
ES.879.1	chr1	-	2721	1	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTTTAGTCTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	84976395	84973674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84973700_84976400
ES.8790.1	chr13	+	191	1	Intergenic	novelGene_7220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGTGTTCATGAAAA	1275	False	NA	NA	False	NA	NA	NA	20994647	20994838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_20994600_20994800
ES.8791.10	chr13	+	760	6	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74236	-23938	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	8.05977667184395	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACCTTGCTTAAGAAG	NA	False	NA	NA	False	AATAAA	-23	NA	21120566	21184484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067
ES.8791.11	chr13	+	2008	10	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74231	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	33.9382154677556	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTCATCAAGAGT	NA	False	NA	34	True	AATAAA	-27	NA	21120571	21208433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21189200_21189298_21197281_21197359_21207378
ES.8791.12	chr13	+	2242	13	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	32.2890590344986	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGGTGTGGGCATAAT	NA	False	NA	19	True	AATAAA	-43	NA	21120575	21208418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21190696_21190831_21197281_21197359_21207378
ES.8791.13	chr13	+	1435	6	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	30.6241734582339	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTGGTGTGGGCATAA	NA	False	NA	18	True	AATAAA	-42	NA	21120575	21208417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21189200_21189298_21197281_21197359_21207378
ES.8791.14	chr13	+	1984	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	-36	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	29.0187870180681	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATATTTGCCTCAATAA	NA	False	NA	-13	True	AATAAA	-11	NA	21120575	21208386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21163633_21163717_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.15	chr13	+	1779	10	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	24.1036854924924	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTGGTGTGGGCATAA	NA	False	NA	18	True	AATAAA	-42	NA	21120575	21208417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21189200_21189298_21197281_21197359_21207378
ES.8791.16	chr13	+	1989	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74208	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.5034780855496	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATATTTGCCTCAATAA	NA	False	NA	-13	True	AATAAA	-11	NA	21120594	21208386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21186809_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.17	chr13	+	7083	1	Intergenic	novelGene_7221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACGAT	NA	False	NA	NA	False	NA	NA	NA	21134370	21141453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_21134400_21141500
ES.8791.18	chr13	+	3594	5	ISM	ENSMUSG00000021322.9	ENSMUST00000021757.5	2921	21	206280	5	-10240	-5	3prime_fragment	FALSE	canonical	3	57	junction_2	6.44204936336256	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTGGTGTGGGCATAA	694	False	NA	18	True	AATAAA	-42	NA	21184562	21208417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.2	chr13	+	2687	6	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74273	-23932	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.804347569275	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGCTTAAGAAGTATTAA	NA	False	NA	NA	False	AATAAA	-29	NA	21120529	21184490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163641_21163717_21178800_21178838_21179589_21181557_21184067
ES.8791.3	chr13	+	4274	13	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74263	1052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.9137649474842	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGCTTATTGCTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	21120539	21209474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21121900_21121998_21123211_21124457_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.4	chr13	+	1325	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74258	-550	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGGCATGTGTAGGTTA	NA	False	NA	NA	False	AATGAA	-42	NA	21120544	21207872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.5	chr13	+	2145	12	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74258	2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	25.995867440171	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGCATAATTGTGTC	NA	False	NA	25	True	AATAAA	-18	NA	21120544	21208424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.6	chr13	+	2918	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74252	1049	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAACTGCTTATTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	21120550	21209471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.7	chr13	+	1958	12	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74248	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	26.2382598697348	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGGTGTGGGCATAAT	NA	False	NA	19	True	AATAAA	-43	NA	21120554	21208418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21121900_21121998_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8791.8	chr13	+	1658	12	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74242	-10623	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_10	32.9028120579733	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGTAATAATTGCAAG	NA	False	NA	NA	False	NA	NA	NA	21120560	21197799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21181288_21181557_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21190696_21190831_21197281
ES.8791.9	chr13	+	1850	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74237	-4	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	53	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGGTGTGGGCATAAT	NA	False	NA	19	True	AATAAA	-43	NA	21120565	21208418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
ES.8792.1	chr13	+	178	1	Intergenic	novelGene_7222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAAGTCTTGGA	2480	False	NA	NA	False	NA	NA	NA	21289999	21290177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_21290000_21290200
ES.8793.1	chr13	+	161	1	Genic_Genomic	ENSMUSG00000060404.4	novel	NA	NA	NA	NA	3255	14	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATAAAAAAAAAAGA	7598	False	NA	NA	False	NA	NA	NA	21303118	21303279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_21303100_21303300
ES.8794.1	chr13	+	185	1	Intergenic	novelGene_7223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	21340256	21340441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_21340300_21340400
ES.8795.1	chr13	+	1908	2	ISM	ENSMUSG00000021326.14	ENSMUST00000222544.2	4312	9	-15	13008	-15	9	5prime_fragment	FALSE	canonical	0	0	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAGCTTACCTTTTGA	428	False	NA	27	True	AATAAA	-28	NA	21363599	21365886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21363727_21364105
ES.8795.10	chr13	+	2245	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	242	1717	-51	143	multi-exon	FALSE	canonical	3	719	junction_6	36.2209771220141	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGGCTTTTGTCAGTGTT	1171	False	NA	NA	False	NA	NA	NA	21364342	21377176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.12	chr13	+	3182	6	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-39	-6	intron_retention	FALSE	non_canonical	0	0	junction_3	310.522784993308	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATACGTTTTGTTTT	1183	False	NA	15	True	AATAAA	-17	NA	21364354	21377027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368159_21374024_21374141_21374261_21375417_21376199
ES.8795.14	chr13	+	2086	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-32	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	285.906550389381	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATACGTTTTGTTTTTGT	1190	False	NA	18	True	AATAAA	-20	NA	21364361	21377030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368162_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.15	chr13	+	4383	8	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-32	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	377.766367708176	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCTGTTATTTTTTG	1190	False	NA	NA	False	AATAAA	-16	NA	21364361	21378892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368155_21374024_21374141_21374261_21374295_21375389_21377402_21377534_21377947_21378154
ES.8795.16	chr13	+	3873	7	NIC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-30	1	intron_retention	FALSE	canonical	3	719	junction_5	31.8799832705937	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTTGTTTTTGTTATG	1192	False	NA	22	True	AATAAA	-24	NA	21364363	21377034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.17	chr13	+	2067	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	295.200167494683	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	1193	False	NA	21	True	AATAAA	-23	NA	21364364	21377033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21376185
ES.8795.18	chr13	+	3731	9	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	258.724243887194	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTGTTATTTTTTGG	1194	False	NA	NA	False	AATAAA	-17	NA	21364365	21378893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199_21377947_21378154
ES.8795.19	chr13	+	2075	6	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	380.660163400375	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACGTTTTGTTTTTGTT	1196	False	NA	19	True	AATAAA	-21	NA	21364367	21377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21376170
ES.8795.2	chr13	+	3491	7	NIC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-75	3	intron_retention	TRUE	canonical	3	719	junction_5	39.0939040431284	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTGTTTTTGTTATGAC	854	False	NA	24	True	AATAAA	-26	NA	21364025	21377036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.20	chr13	+	2688	9	NNC	ENSMUSG00000021326.14	novel	4312	9	NA	NA	-18	752	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	258.724243887194	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGCTTTTTTGGTCAGT	1204	False	NA	NA	False	NA	NA	NA	21364375	21377785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199_21377402_21377534
ES.8795.21	chr13	+	2041	8	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-18	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	274.166640820461	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCATACGTTTTGTTTTT	1204	False	NA	16	True	AATAAA	-18	NA	21364375	21377028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375421_21376226
ES.8795.22	chr13	+	4947	6	NIC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	734	junction_2	25.8193725717725	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGTTTTGTTTTTGTTA	1211	False	NA	20	True	AATAAA	-22	NA	21364382	21377032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21374141_21374261_21375417_21376199
ES.8795.23	chr13	+	2052	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	285.906550389381	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGTTTTGTTTTTGTTA	1212	False	NA	20	True	AATAAA	-22	NA	21364383	21377032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368148_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.24	chr13	+	2813	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	283	1108	-10	752	multi-exon	FALSE	canonical	3	719	junction_6	36.2209771220141	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGCTTTTTTGGTCAGT	1212	False	NA	NA	False	NA	NA	NA	21364383	21377785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.25	chr13	+	2835	7	ISM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	283	1869	-10	3	intron_retention	FALSE	canonical	3	719	junction_6	39.0156663690654	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCATACGTTTTGT	1212	False	NA	12	True	AATAAA	-14	NA	21364383	21377024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389
ES.8795.26	chr13	+	3579	10	NNC	ENSMUSG00000021326.14	novel	4312	9	NA	NA	-10	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	324.014326767532	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCTGTTATTTTTTG	1212	False	NA	NA	False	AATAAA	-16	NA	21364383	21378892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199_21377402_21377534_21377947_21378154
ES.8795.27	chr13	+	2026	6	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	314.19522593445	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATACGTTTTGTTTT	1215	False	NA	15	True	AATAAA	-17	NA	21364386	21377027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374175_21376199
ES.8795.28	chr13	+	3076	9	NNC	ENSMUSG00000021326.14	novel	4312	9	NA	NA	1	-626	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	258.724243887194	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTAATGGCTTTGCTC	1223	False	NA	NA	False	CATAAA	-27	NA	21364394	21378267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199_21377947_21378154
ES.8795.29	chr13	+	1245	7	NIC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	2706	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	376.506160492612	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGTTTTGTTTTTGTTA	4842	False	NA	20	True	AATAAA	-22	NA	21368013	21377032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21374762_21374857_21375389_21375417_21376199
ES.8795.3	chr13	+	1685	8	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-26	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	272.904408770783	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACGTTTTGTTTTTGTT	903	False	NA	19	True	AATAAA	-21	NA	21364074	21377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21364402_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.30	chr13	+	3780	2	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	875	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTGTTATTTTTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	21374905	21378893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21377947_21378154
ES.8795.31	chr13	+	1270	2	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	3385	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCTGTTATTTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	21377415	21378892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21377938_21378144
ES.8795.4	chr13	+	2365	7	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	285.906550389381	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	906	False	NA	21	True	AATAAA	-23	NA	21364077	21377033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365085_21366153_21366250_21367901_21368154_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.5	chr13	+	2351	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	-5	1858	-5	2	multi-exon	FALSE	canonical	3	719	junction_6	36.2209771220141	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTGTTTTTGTTATGA	924	False	NA	23	True	AATAAA	-25	NA	21364095	21377035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8795.6	chr13	+	5982	6	NIC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	1	753	intron_retention	FALSE	canonical	3	734	junction_2	25.8193725717725	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCTTTTTTGGTCAGTA	930	False	NA	NA	False	NA	NA	NA	21364101	21377786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21374141_21374261_21375417_21376199
ES.8795.7	chr13	+	3432	7	NIC	ENSMUSG00000021326.14	novel	4312	9	NA	NA	5	-2	intron_retention	FALSE	canonical	3	734	junction_2	30.1385688667085	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATACGTTTTGTTTTTGTT	934	False	NA	19	True	AATAAA	-21	NA	21364105	21377031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21375417_21376199
ES.8795.8	chr13	+	3180	8	NNC	ENSMUSG00000021326.14	novel	4204	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	273.598096424933	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	956	False	NA	21	True	AATAAA	-23	NA	21364127	21377033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21365948_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ES.8796.1	chr13	-	204	1	Intergenic	novelGene_7224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAAATGATGGCTAA	NA	False	NA	NA	False	NA	NA	NA	21402754	21402550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21402600_21402800
ES.8797.1	chr13	+	251	1	Intergenic	novelGene_7225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAAATACAGCTAGG	2190	False	NA	NA	False	NA	NA	NA	21418212	21418463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_21418200_21418500
ES.8798.1	chr13	-	157	1	Intergenic	novelGene_7226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGTAAATAAATAAGT	1790	False	NA	NA	False	NA	NA	NA	21451947	21451790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21451800_21451900
ES.8799.1	chr13	-	202	1	Intergenic	novelGene_7227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCCTTCTGAGGTAG	1025	False	NA	NA	False	AAAACA	-29	NA	21452712	21452510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21452500_21452700
ES.88.1	chr1	+	1302	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACACACATACTCTAACA	NA	False	NA	NA	False	NA	NA	NA	10299731	10301033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10299700_10301000
ES.880.1	chr1	-	143	1	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTATTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	84978146	84978003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84978000_84978100
ES.8800.1	chr13	+	1299	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	47	-6	47	6	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGAGTGATGTTTTCAG	972	False	NA	NA	False	NA	NA	NA	21496341	21503800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
ES.8801.1	chr13	-	219	1	Intergenic	novelGene_7228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTCATGTTGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	21534677	21534458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21534500_21534700
ES.8802.1	chr13	+	4424	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	-8	-11	-8	11	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGGTAATTGGCTAAT	NA	False	NA	19	True	NA	NA	NA	21546981	21556470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ES.8802.10	chr13	+	3684	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	40	-972	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCACATATCTTAAGG	NA	False	NA	NA	False	NA	NA	NA	21547041	21555487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
ES.8802.11	chr13	+	2113	5	NNC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	29.0978951128772	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATACTGTCCTTTG	NA	False	NA	10	True	CATAAA	-15	NA	21547045	21553996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_21547346_21547749_21547893_21547968_21548222_21550784_21550927_21552721
ES.8802.12	chr13	+	6498	2	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	-167	0	intron_retention	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGTATACTGTCCTT	NA	False	NA	8	True	CATAAA	-13	NA	21547287	21553994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21547541_21547749
ES.8802.13	chr13	+	3685	2	ISM	ENSMUSG00000036721.15	ENSMUST00000099720.3	2182	3	294	-2	294	2	intron_retention	FALSE	canonical	3	63	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATACTGTCCTTTG	NA	False	NA	10	True	CATAAA	-15	NA	21547748	21553996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21548222_21550784
ES.8802.2	chr13	+	3430	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	6	969	-6	-969	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACATATCTTAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	21546995	21555490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ES.8802.3	chr13	+	1427	3	ISM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	9	4764	-3	-2299	5prime_fragment	FALSE	canonical	3	44	junction_1	9.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAAGATGGTGGACTTG	NA	False	NA	NA	False	AGTAAA	-17	NA	21546998	21551695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21547043_21547749_21548222_21550784
ES.8802.4	chr13	+	3726	3	ISM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	12	2462	0	3	intron_retention	FALSE	canonical	3	44	junction_1	9.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	11	True	CATAAA	-16	NA	21547001	21553997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21547043_21547749_21548222_21550784
ES.8802.5	chr13	+	5195	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	20	-810	8	810	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCCTGTGAGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	21547009	21557269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ES.8802.6	chr13	+	4685	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	12	1	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTCATAATTATGGTA	NA	False	NA	9	True	NA	NA	NA	21547013	21556460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
ES.8802.7	chr13	+	10055	3	ISM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	29	-3884	17	3884	intron_retention	FALSE	canonical	3	44	junction_1	9.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAGGCAGAGTATATGC	NA	False	NA	NA	False	TATAAA	-20	NA	21547018	21560343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_21547043_21547749_21548222_21550784
ES.8802.8	chr13	+	1913	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	29	2463	17	2	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATACTGTCCTTTG	NA	False	NA	10	True	CATAAA	-15	NA	21547018	21553996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ES.8802.9	chr13	+	2211	4	NIC	ENSMUSG00000036721.15	novel	2270	5	NA	NA	23	3	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	22.9927524813074	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATACTGTCCTTTGT	NA	False	NA	11	True	CATAAA	-16	NA	21547024	21553997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_21547346_21547749_21548222_21550784_21550927_21552721
ES.8803.1	chr13	-	398	2	Intergenic	novelGene_7229	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAACAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	21565990	21565558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21565631_21565664
ES.8804.1	chr13	-	168	1	Intergenic	novelGene_7230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAACATTCTGA	NA	False	NA	NA	False	NA	NA	NA	21567642	21567474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21567500_21567600
ES.8805.1	chr13	+	1466	1	Antisense	novelGene_ENSMUSG00000021327.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATCCCCAGGATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	21584590	21586056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_21584600_21586100
ES.8806.1	chr13	-	2830	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	9	-2	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	37.8386046254351	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTGGTTCTTACTTG	NA	False	NA	0	True	AATAAA	-21	NA	21586874	21571174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586561
ES.8806.12	chr13	-	2947	6	NNC	ENSMUSG00000021327.20	novel	2600	6	NA	NA	-2	-9	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	44.826777711542	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCAGCCTGTTGGTTC	NA	False	NA	-7	True	AATAAA	-14	NA	21586903	21571181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21579891_21580745_21586841
ES.8806.13	chr13	-	7814	5	NIC	ENSMUSG00000021327.20	novel	2600	6	NA	NA	-7	-9	intron_retention	FALSE	canonical	3	29	junction_4	29.3385412043612	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCAGCCTGTTGGTTC	NA	False	NA	-7	True	AATAAA	-14	NA	21586893	21571181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ES.8806.14	chr13	-	2077	5	FSM	ENSMUSG00000021327.20	ENSMUST00000223831.2	2101	5	15	9	0	-9	multi-exon	FALSE	canonical	0	0	junction_4	45.4477722226294	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCAGCCTGTTGGTTC	NA	False	NA	-7	True	AATAAA	-14	NA	21586886	21571181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586841
ES.8806.16	chr13	-	2444	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	2	-10	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	41.3714877663349	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCAGCCTGTTGGTT	NA	False	NA	-8	True	AATAAA	-13	NA	21586863	21571182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580356_21580748_21586841
ES.8806.17	chr13	-	3989	5	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	-8	-10	intron_retention	FALSE	canonical	3	8	junction_4	42.017853348309	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCAGCCTGTTGGTT	NA	False	NA	-8	True	AATAAA	-13	NA	21586848	21571182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21580748_21586561
ES.8806.18	chr13	-	2312	5	NIC	ENSMUSG00000021327.20	novel	2101	5	NA	NA	-2	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.4477722226294	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCAGCCTGTTGGTT	NA	False	NA	-8	True	AATAAA	-13	NA	21586842	21571182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586561
ES.8806.19	chr13	-	2835	8	NNC	ENSMUSG00000021327.20	novel	2600	6	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	46.7572978042913	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTCAGCCTGTTGGTT	NA	False	NA	-8	True	AATAAA	-13	NA	21586906	21571182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21572877_21577604_21577745_21577826_21577966_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586856
ES.8806.2	chr13	-	7646	6	NNC	ENSMUSG00000021327.20	novel	2600	6	NA	NA	-6	-4	intron_retention	TRUE	non_canonical	0	0	junction_1	41.2291159255204	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTGTTGGTTCTTACT	NA	False	NA	-2	True	AATAAA	-19	NA	21586892	21571176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21575893_21576064_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ES.8806.20	chr13	-	7119	3	Fusion	ENSMUSG00000098790.3_ENSMUSG00000021327.20	novel	436	5	NA	NA	2606	-15	intron_retention	FALSE	canonical	0	0	junction_2	57	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTAAGGCTCAGCCTGT	NA	False	NA	-13	True	AATAAA	-8	NA	21584234	21571187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_21572877_21578131_21578256_21578928
ES.8806.3	chr13	-	7633	6	NNC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	8	-5	intron_retention	FALSE	non_canonical	0	0	junction_1	38.3770764910513	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCCTGTTGGTTCTTAC	NA	False	NA	-3	True	AATAAA	-18	NA	21586875	21571177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21575904_21576073_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
ES.8806.4	chr13	-	2434	6	NNC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	6	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.0231508426117	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	21586877	21571179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21572763_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
ES.8806.5	chr13	-	9832	4	ISM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	9	7	9	-7	intron_retention	FALSE	canonical	3	99	junction_2	7.07106781186548	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	21586874	21571179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928
ES.8806.6	chr13	-	6033	5	ISM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	2615	7	2572	-7	3prime_fragment	FALSE	canonical	3	91	junction_4	8.31790237980706	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCAGCCTGTTGGTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	21584268	21571179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269
ES.8806.8	chr13	-	2562	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	29	9	5	-9	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCAGCCTGTTGGTTC	NA	False	NA	-7	True	AATAAA	-14	NA	21586896	21571181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ES.8806.9	chr13	-	2712	6	NIC	ENSMUSG00000021327.20	novel	2561	6	NA	NA	-10	-9	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	48.8450611628238	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTCAGCCTGTTGGTTC	NA	False	NA	-7	True	AATAAA	-14	NA	21586850	21571181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580356_21580748_21586561
ES.8807.1	chr13	-	3549	2	ISM	ENSMUSG00000055313.16	ENSMUST00000239246.2	2642	5	11002	-1	4555	1	3prime_fragment	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTTCCTCACTTTCAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	21614212	21606020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_21607795_21612437
ES.8807.2	chr13	-	2889	5	FSM	ENSMUSG00000055313.16	ENSMUST00000239246.2	2642	5	-247	0	-233	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTCCTCACTTTCAG	NA	False	NA	NA	False	ATTAAA	-13	NA	21625461	21606021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21607795_21612437_21612549_21617560_21617713_21618520_21618842_21624929
ES.8808.1	chr13	-	4015	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	-92	-5	-22	5	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGAGGATAGTTAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	21637922	21626344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
ES.8808.10	chr13	-	1771	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	26	2569	26	-2569	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATATTCACTACAGAGC	NA	False	NA	NA	False	NA	NA	NA	21637874	21628918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ES.8808.2	chr13	-	4365	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	6	-5	6	5	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGAGGATAGTTAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	21637894	21626344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ES.8808.3	chr13	-	5353	4	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	8	-66	intron_retention	FALSE	canonical	3	15	junction_2	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGTAAAGATTTT	NA	False	NA	NA	False	AATAAA	-36	NA	21637892	21626415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21630000_21631955_21633504_21633610_21633687_21637747
ES.8808.4	chr13	-	2757	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	20	1589	20	-1589	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATGCAAGAGACTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	21637880	21627938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ES.8808.5	chr13	-	2328	4	NNC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	32	-1589	intron_retention	FALSE	canonical	1	1	junction_1	7.78888096369861	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTATGCAAGAGACTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	21637868	21627938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21629961_21631955_21632065_21633610_21633687_21637747
ES.8808.6	chr13	-	2319	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	19	-1710	intron_retention	FALSE	canonical	3	7	junction_2	5.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTTTTGCTGTTTAAC	NA	False	NA	NA	False	AATGAA	-10	NA	21637881	21628059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
ES.8808.7	chr13	-	1528	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	-74	2464	-4	-2464	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAAGTGCCTATAGAT	NA	False	NA	NA	False	AATGAA	-15	NA	21637904	21628813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
ES.8808.8	chr13	-	7125	2	ISM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	6	2464	6	-2464	intron_retention	FALSE	canonical	3	22	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAAGTGCCTATAGAT	NA	False	NA	NA	False	AATGAA	-15	NA	21637894	21628813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_21630000_21631955
ES.8808.9	chr13	-	1585	5	NIC	ENSMUSG00000022228.15	novel	4366	6	NA	NA	-1	-2464	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	5.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAAGTGCCTATAGAT	NA	False	NA	NA	False	AATGAA	-15	NA	21637901	21628813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21630000_21631955_21632065_21633443_21633504_21633610_21633687_21637747
ES.8809.1	chr13	-	975	1	Intergenic	novelGene_7231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTTTTGCAAACATTT	NA	False	NA	NA	False	AATAAA	-17	NA	21649319	21648344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21648300_21649300
ES.881.1	chr1	-	172	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84983809	84983637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_84983600_84983800
ES.8810.1	chr13	-	1431	1	FSM	ENSMUSG00000059395.5	ENSMUST00000068235.6	1463	1	-20	52	-20	-52	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATGACTAAAAAGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	21652699	21651268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21651300_21652700
ES.8811.1	chr13	+	2453	3	FSM	ENSMUSG00000054931.8	ENSMUST00000062609.6	2400	3	-58	5	-58	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTTTTAGTTAGAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	21663018	21669672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21663680_21665443_21665601_21668037
ES.8812.1	chr13	-	526	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	-31	-105	-31	105	mono-exon	FALSE	NA	NA	NA	NA	NA	293	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATGGGTATTTTCCT	NA	False	NA	NA	False	NA	NA	NA	21685619	21685093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21685100_21685600
ES.8813.1	chr13	-	5256	7	Fusion	ENSMUSG00000063894.16_ENSMUSG00000082396.5	novel	928	5	NA	NA	18	692	intron_retention	FALSE	canonical	0	0	junction_2	10.1557318243881	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACATGCAAGCTTCTTGT	6569	False	NA	NA	False	AATAAA	-15	NA	21715272	21687790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_21689403_21690677_21690809_21703485_21706080_21706393_21706486_21709307_21709477_21710688_21711189_21715114
ES.8813.10	chr13	-	1306	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	31	7468	-16	1141	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTACTGTGTGCGGT	6582	False	NA	NA	False	NA	NA	NA	21715259	21704859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.2	chr13	-	7381	6	NNC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.4422219857653	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATTTTTTTGTAAT	6570	False	NA	0	True	NA	NA	NA	21715271	21697390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21698186_21699467_21705133_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.3	chr13	-	8905	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	-99	-1	-99	1	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGATTTTTTTGTAAT	6452	False	NA	0	True	NA	NA	NA	21715389	21697390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.4	chr13	-	7504	7	NNC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	18	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.76029781788188	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGGATTTTTTTGTA	6569	False	NA	-2	True	NA	NA	NA	21715272	21697392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_21698186_21699467_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.5	chr13	-	7909	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	61	835	14	625	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCATTGCTTTTTGTG	6612	False	NA	NA	False	AATAAA	-30	NA	21715229	21698226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.6	chr13	-	6545	5	NIC	ENSMUSG00000063894.16	novel	8805	6	NA	NA	6	-623	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.39414711402797	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGTAGTTGCAAATA	6604	False	NA	NA	False	NA	NA	NA	21715237	21699474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_21705133_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.7	chr13	-	6694	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	28	2083	-19	-623	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGTAGTTGCAAATA	6579	False	NA	NA	False	NA	NA	NA	21715262	21699474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.8	chr13	-	3273	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	28	5504	-19	3105	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAGTACTATGATTT	6579	False	NA	NA	False	AATAAA	-18	NA	21715262	21702895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8813.9	chr13	-	2235	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	19	6551	19	2058	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACTATATTTTGTCT	6570	False	NA	NA	False	AGTAAA	-16	NA	21715271	21703942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ES.8814.1	chr13	+	1058	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-27	-638	-27	638	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAACCTGCGGCGGGAT	3372	False	NA	NA	False	AATAAA	-15	NA	21900564	21901622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21900600_21901600
ES.8814.2	chr13	+	462	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-25	-44	-25	44	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTCCAAAGAGACCTA	3374	False	NA	2	True	NA	NA	NA	21900566	21901028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21900600_21901000
ES.8814.3	chr13	+	627	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	-25	-209	-25	209	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGACACATCTTGAAC	3374	False	NA	NA	False	NA	NA	NA	21900566	21901193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21900600_21901200
ES.8815.1	chr13	+	487	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	-31	-45	-31	45	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTACACAAAGGTGCTG	4605	False	NA	NA	False	NA	NA	NA	21901797	21902284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21901800_21902300
ES.8816.1	chr13	-	3734	1	FSM	ENSMUSG00000064288.5	ENSMUST00000102983.2	312	1	-34	-3388	-34	3388	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGATCTTCTTTCTTGT	NA	False	NA	NA	False	AATAAA	-43	NA	21934709	21930975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21931000_21934700
ES.8817.1	chr13	-	4596	3	Intergenic	novelGene_7232	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	21951837	21947048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_21948732_21948824_21949478_21949577
ES.8818.1	chr13	+	401	1	Antisense	novelGene_ENSMUSG00000101972.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTGGTGTTGAGATG	NA	False	NA	NA	False	NA	NA	NA	21967158	21967559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_21967200_21967600
ES.8819.1	chr13	-	482	1	FSM	ENSMUSG00000101972.2	ENSMUST00000189457.2	411	1	-30	-41	-30	41	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTTTGTCACCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21967570	21967088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21967100_21967600
ES.882.1	chr1	+	166	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAACTGGAGCAAGTG	NA	False	NA	NA	False	NA	NA	NA	85008659	85008825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85008700_85008800
ES.8820.1	chr13	+	1724	1	FSM	ENSMUSG00000069308.8	ENSMUST00000102982.2	469	1	-19	-1236	-19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTAATACAGTCTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	21971658	21973382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21971700_21973400
ES.8821.1	chr13	-	2119	2	FSM	ENSMUSG00000069307.8	ENSMUST00000091749.4	1254	2	-1	-864	-1	199	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGGAATCCTGATTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	21994368	21990582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_21992298_21993964
ES.8822.1	chr13	+	485	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	-34	29	-34	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTGTCTTTTAAAGAA	NA	False	NA	NA	False	AAAAAG	-18	NA	21994600	21995085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_21994600_21995100
ES.8823.1	chr13	-	450	1	FSM	ENSMUSG00000069305.4	ENSMUST00000102979.2	430	1	0	-20	0	20	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAATGAGGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	22016366	22015916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22015900_22016400
ES.8824.1	chr13	-	483	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTCTTTTAAAGAACT	NA	False	NA	NA	False	AAAAAG	-20	NA	22017677	22017194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22017200_22017700
ES.8825.1	chr13	+	457	1	NIC	ENSMUSG00000069303.8	novel	1256	2	NA	NA	1	-2465	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTCAGCGTAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	22017913	22018370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22017900_22018400
ES.8826.1	chr13	+	2050	4	Intergenic	novelGene_7233	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAATTAGGTATTT	NA	False	NA	NA	False	NA	NA	NA	22063956	22071459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22064052_22068423_22068560_22068853_22069000_22069786
ES.8827.1	chr13	+	2331	1	Genic_Genomic	ENSMUSG00000081576.2	novel	NA	NA	NA	NA	-483	219	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAGAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	22086842	22089173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_22086800_22089200
ES.8828.1	chr13	-	177	1	Antisense	novelGene_ENSMUSG00000081576.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTTTTCTTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	22088429	22088252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_22088300_22088400
ES.8829.1	chr13	-	195	1	Intergenic	novelGene_7234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAGAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22095167	22094972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22095000_22095200
ES.883.1	chr1	+	1199	5	NIC	ENSMUSG00000072109.12	novel	1248	6	NA	NA	2	10	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTGGTGCTTTGAGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	85084356	85091505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85084412_85089529_85089681_85089912_85090033_85090171_85090307_85090767
ES.8830.1	chr13	-	2478	1	Intergenic	novelGene_7235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAAACCCGGTCTACC	NA	False	NA	NA	False	AATAAA	-17	NA	22098853	22096375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22096400_22098900
ES.8831.1	chr13	+	103	1	Intergenic	novelGene_7236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGACTCACTGATAGA	NA	False	NA	NA	False	NA	NA	NA	22103550	22103653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22103600_22103700
ES.8832.1	chr13	-	101	1	Intergenic	novelGene_7237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	22104113	22104012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22104000_22104100
ES.8833.1	chr13	+	123	1	Intergenic	novelGene_7238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22105068	22105191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22105100_22105200
ES.8834.1	chr13	-	174	1	Intergenic	novelGene_7239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGTAATTTGCTCCT	NA	False	NA	NA	False	AATAAA	-43	NA	22115408	22115234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22115200_22115400
ES.8835.1	chr13	-	172	1	Intergenic	novelGene_7240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTCTCAAATGCC	NA	False	NA	NA	False	NA	NA	NA	22128020	22127848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22127800_22128000
ES.8836.1	chr13	+	2685	6	NNC	ENSMUSG00000006720.17	novel	2703	6	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4499589490692	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	False	NA	10	True	ATTAAA	-14	NA	22129240	22144653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_22129370_22129764_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.10	chr13	+	2865	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	160	173	135	3	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATTTTTGTCATGGCT	NA	False	NA	NA	False	CATAAA	-16	NA	22129441	22144776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.11	chr13	+	3045	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	162	-9	137	9	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTGCTGCTGACT	NA	False	NA	NA	False	AATAAA	-21	NA	22129443	22144958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.12	chr13	+	2630	5	NIC	ENSMUSG00000006720.17	novel	3198	6	NA	NA	151	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	31.1247489949718	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	False	NA	10	True	ATTAAA	-14	NA	22129457	22144653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22142593
ES.8836.13	chr13	+	5456	4	NIC	ENSMUSG00000006720.17	novel	2214	5	NA	NA	151	2	intron_retention	FALSE	canonical	3	62	junction_3	9.41629792788369	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTAAGTTTCTTCTGTA	NA	False	NA	14	True	ATTAAA	-18	NA	22129457	22144657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22129970_22131172_22133957_22134403_22134500_22142593
ES.8836.14	chr13	+	4506	1	NIC	ENSMUSG00000006720.17	novel	2834	6	NA	NA	6588	2	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTAAGTTTCTTCTGTA	NA	False	NA	14	True	ATTAAA	-18	NA	22140151	22144657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22140200_22144700
ES.8836.2	chr13	+	3013	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-13	-297	-13	3	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCAAATTCAGTTGCTG	NA	False	NA	NA	False	AATAAA	-15	NA	22129250	22144952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.3	chr13	+	2718	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-13	-2	-13	2	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTAAGTTTCTTCTGTA	NA	False	NA	14	True	ATTAAA	-18	NA	22129250	22144657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.4	chr13	+	2735	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176580.8	2834	6	-21	120	-3	-2	multi-exon	FALSE	canonical	1	1	junction_4	30.2654919008431	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	False	NA	10	True	ATTAAA	-14	NA	22129260	22144653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134372_22134500_22142593
ES.8836.5	chr13	+	2608	5	NIC	ENSMUSG00000006720.17	novel	2703	6	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	32.7108544675922	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	False	NA	10	True	ATTAAA	-14	NA	22129260	22144653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22142593
ES.8836.6	chr13	+	7299	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	-3	-4593	-3	4299	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCCTGTATGCACAAT	NA	False	NA	NA	False	NA	NA	NA	22129260	22149248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.7	chr13	+	2727	6	NIC	ENSMUSG00000006720.17	novel	2703	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	28.9025950392002	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129269	22144655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_22129400_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.8	chr13	+	2791	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	117	290	92	4	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCTTCTGTAAA	NA	False	NA	16	True	ATTAAA	-20	NA	22129398	22144659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ES.8836.9	chr13	+	2666	6	NNC	ENSMUSG00000006720.17	novel	3198	6	NA	NA	127	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	28.9385555962975	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	False	NA	10	True	ATTAAA	-14	NA	22129433	22144653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133881_22134411_22134500_22142593
ES.8837.1	chr13	-	4632	1	Antisense	novelGene_ENSMUSG00000006720.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-4	NA	22149467	22144835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_22144800_22149500
ES.8838.1	chr13	-	1875	1	Antisense	novelGene_ENSMUSG00000016982.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTATAATGATTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	22166125	22164250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_22164200_22166100
ES.8839.1	chr13	-	2867	5	FSM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	-30	-1678	-30	1300	multi-exon	FALSE	canonical	2	4	junction_2	4.63680924774785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTTTTCCCAACC	NA	False	NA	NA	False	AATAAA	-15	NA	22190612	22185042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22186981_22187095_22187242_22187315_22187496_22189260_22189403_22190151
ES.8839.2	chr13	-	1487	3	NIC	ENSMUSG00000006179.10	novel	1159	5	NA	NA	-21	-3	intron_retention	FALSE	canonical	0	0	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTTCTCTCTGCTGTG	NA	False	NA	NA	False	NA	NA	NA	22190603	22186345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_22186981_22187095_22187496_22190151
ES.8839.3	chr13	-	3029	3	NIC	ENSMUSG00000006179.10	novel	1159	5	NA	NA	-26	5	intron_retention	FALSE	canonical	3	14	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTCCTTTGTAGGTA	NA	False	NA	NA	False	TATAAA	-13	NA	22190608	22186715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_22186981_22187095_22189403_22190151
ES.884.1	chr1	-	171	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTTTCAGA	2576	False	NA	NA	False	NA	NA	NA	85109909	85109738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_85109700_85109900
ES.8840.1	chr13	+	1750	1	Antisense	novelGene_ENSMUSG00000006179.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATAGTAGATGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	22191312	22193062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_22191300_22193100
ES.8841.1	chr13	+	161	1	Intergenic	novelGene_7241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22200083	22200244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22200100_22200200
ES.8842.1	chr13	-	475	1	FSM	ENSMUSG00000069302.6	ENSMUST00000091742.6	405	1	-27	-43	-27	43	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCCAGAAAGAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	22219765	22219290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22219300_22219800
ES.8843.1	chr13	+	482	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	-33	27	-33	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACCAGTATTAGAGCT	NA	False	NA	12	True	NA	NA	NA	22220006	22220488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_22220000_22220500
ES.8844.1	chr13	-	114	1	Intergenic	novelGene_7242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTAAATGG	NA	False	NA	NA	False	NA	NA	NA	22221510	22221396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22221400_22221500
ES.8845.1	chr13	-	729	1	FSM	ENSMUSG00000060639.6	ENSMUST00000102977.4	727	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAAACAGCTGGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	22225532	22224803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22224800_22225500
ES.8845.2	chr13	-	400	1	FSM	ENSMUSG00000060639.6	ENSMUST00000102977.4	727	1	0	327	0	-327	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATCAAAAGAGCTAAG	NA	False	NA	NA	False	NA	NA	NA	22225532	22225132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22225100_22225500
ES.8845.3	chr13	-	293	1	FSM	ENSMUSG00000060639.6	ENSMUST00000102977.4	727	1	1	433	1	-433	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTCTACGCGCTCAA	NA	False	NA	NA	False	NA	NA	NA	22225531	22225238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22225200_22225500
ES.8846.1	chr13	-	482	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	-16	19	-16	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTAACAAGGGCT	NA	False	NA	0	True	NA	NA	NA	22227130	22226648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_22226600_22227100
ES.8847.1	chr13	-	157	1	Intergenic	novelGene_7243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22291277	22291120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_22291100_22291300
ES.8848.1	chr13	+	179	1	Intergenic	novelGene_7244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGGAACA	NA	False	NA	NA	False	NA	NA	NA	22605528	22605707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22605500_22605700
ES.8849.1	chr13	-	7273	2	Antisense	novelGene_ENSMUSG00000082178.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	22863646	22856246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_22858511_22858637
ES.885.1	chr1	+	4067	2	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCACGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-8	NA	85181901	85188953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85183756_85186740
ES.8850.1	chr13	+	176	1	Intergenic	novelGene_7245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATCTTTT	NA	False	NA	NA	False	NA	NA	NA	22894441	22894617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22894400_22894600
ES.8851.1	chr13	-	4050	1	Genic_Genomic	ENSMUSG00000071493.6	novel	NA	NA	NA	NA	1591	3789	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTATCTGTGTGAGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	22955904	22951854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_22951900_22955900
ES.8852.1	chr13	+	6693	2	Intergenic	novelGene_7246	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCTGTGTTGCCATTA	NA	False	NA	NA	False	NA	NA	NA	22972522	22979320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22979001_22979105
ES.8852.2	chr13	+	198	1	Intergenic	novelGene_7247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGTGGTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	22974284	22974482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_22974300_22974500
ES.8853.1	chr13	-	2177	1	Intergenic	novelGene_7248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGGCATGG	NA	False	NA	-3	True	NA	NA	NA	23021728	23019551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23019600_23021700
ES.8854.1	chr13	-	6768	1	Intergenic	novelGene_7249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGGCTACATTT	7977	False	NA	NA	False	NA	NA	NA	23361209	23354441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23354400_23361200
ES.8855.1	chr13	+	157	1	Intergenic	novelGene_7250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23397099	23397256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_23397100_23397300
ES.8856.1	chr13	+	7575	1	Intergenic	novelGene_7251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	23527758	23535333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_23527800_23535300
ES.8857.1	chr13	+	173	1	Antisense	novelGene_ENSMUSG00000046351.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTAATGCTTC	3408	False	NA	NA	False	NA	NA	NA	23538827	23539000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_23538800_23539000
ES.8858.1	chr13	-	4918	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-13	-4090	1	0	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9007	False	NA	0	True	AATAAA	-22	NA	23553377	23537272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.10	chr13	-	4273	6	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	-3	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	43.9836333196793	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTTTGTCTCCACTA	9010	False	NA	-5	True	AATAAA	-17	NA	23553374	23537277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23538689_23539603_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ES.8858.11	chr13	-	9924	3	NIC	ENSMUSG00000046351.12	novel	4844	4	NA	NA	2	-7	combination_of_known_junctions	FALSE	canonical	3	104	junction_2	12.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTTTTGTCTCCAC	9008	False	NA	-7	True	AATAAA	-15	NA	23553376	23537279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23547046_23552289_23552376_23553304
ES.8858.12	chr13	-	3258	5	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	52.1122586346054	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCATTTTTGTCTCCAC	9014	False	NA	-7	True	AATAAA	-15	NA	23553370	23537279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23538689_23540259_23541884_23546972_23547046_23552289_23552376_23553304
ES.8858.14	chr13	-	4994	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	31	-10	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	51.1366795949835	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTCCATTTTTGTCTC	9051	False	NA	-10	True	AATAAA	-12	NA	23553333	23537282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.15	chr13	-	4230	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-12	-3403	2	-687	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGTCTCTGTGTCAAA	9008	False	NA	NA	False	NA	NA	NA	23553376	23537959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.16	chr13	-	4445	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	58	-3242	51	-687	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGTCTCTGTGTCAAA	9071	False	NA	NA	False	NA	NA	NA	23553313	23537959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ES.8858.17	chr13	-	3913	3	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	574	-885	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATTGTGTCAGTTG	9312	False	NA	NA	False	AGTAAA	-31	NA	23546806	23538157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23541884_23543467_23543598_23546749
ES.8858.18	chr13	-	3193	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-13	-2365	1	-1725	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATTATACA	9007	False	NA	NA	False	ATTAAA	-13	NA	23553377	23538997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.19	chr13	-	8208	3	NIC	ENSMUSG00000046351.12	novel	4844	4	NA	NA	-16	-1741	combination_of_known_junctions	FALSE	canonical	3	104	junction_2	12.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGATT	8990	False	NA	NA	False	AATGAA	-5	NA	23553394	23539013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23547046_23552289_23552376_23553304
ES.8858.2	chr13	-	4850	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	-6	0	-6	0	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9000	False	NA	0	True	AATAAA	-22	NA	23553384	23537272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ES.8858.20	chr13	-	2601	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	15	2228	1	1700	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGTGTGGTTTATTGT	9021	False	NA	1	True	AATAAA	-26	NA	23553363	23539500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ES.8858.21	chr13	-	2751	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	207	-1697	6	1696	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTAGGGTGTGGTTTA	9220	False	NA	-3	True	AATAAA	-22	NA	23553164	23539504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ES.8858.22	chr13	-	2990	7	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	-6	1696	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	47.7830746417832	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTAGGGTGTGGTTTA	9000	False	NA	-3	True	AATAAA	-22	NA	23553384	23539504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553026_23553244_23553354
ES.8858.23	chr13	-	2802	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	1	1689	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	51.1366795949835	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTATAAGTAGGGTG	9014	False	NA	-10	True	AATAAA	-15	NA	23553370	23539511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.24	chr13	-	2678	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	-14	-1849	0	1687	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGTATAAGTAGGG	9006	False	NA	-12	True	AATAAA	-13	NA	23553378	23539513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.25	chr13	-	2651	4	FSM	ENSMUSG00000046351.12	ENSMUST00000152557.8	986	4	21	-1686	21	1686	multi-exon	FALSE	canonical	3	23	junction_3	48.1940521918075	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTGTGTATAAGTAGG	9235	False	NA	-13	True	AATAAA	-12	NA	23553149	23539514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553026
ES.8858.3	chr13	-	5042	4	NIC	ENSMUSG00000046351.12	novel	815	5	NA	NA	10	-1	intron_retention	FALSE	canonical	3	71	junction_1	23.7533623350932	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9030	False	NA	-1	True	AATAAA	-21	NA	23553354	23537273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23541884_23546749_23547046_23552289_23552376_23553304
ES.8858.4	chr13	-	5305	6	NNC	ENSMUSG00000046351.12	novel	1261	5	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	48.6028805730689	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCTCCACTATACT	9027	False	NA	-1	True	AATAAA	-21	NA	23553357	23537273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23541884_23543467_23543598_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ES.8858.5	chr13	-	5156	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	32	-3927	25	-2	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTCTCCACTATAC	9045	False	NA	-2	True	AATAAA	-20	NA	23553339	23537274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ES.8858.6	chr13	-	3302	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.9958137497129	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTGTCTCCACTATA	9049	False	NA	-3	True	AATAAA	-19	NA	23553335	23537275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23538689_23540259_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.7	chr13	-	3986	6	NNC	ENSMUSG00000046351.12	novel	815	5	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	41.947586342959	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTGTCTCCACTATA	9021	False	NA	-3	True	AATAAA	-19	NA	23553363	23537275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23538689_23539603_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ES.8858.8	chr13	-	4902	4	FSM	ENSMUSG00000046351.12	ENSMUST00000152557.8	986	4	9	-3925	9	-3	multi-exon	FALSE	canonical	3	23	junction_3	48.1940521918075	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTGTCTCCACTATA	9223	False	NA	-3	True	AATAAA	-19	NA	23553161	23537275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553026
ES.8859.1	chr13	-	152	1	Intergenic	novelGene_7252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGATATCCTTCATGC	2297	False	NA	NA	False	AATAAA	-39	NA	23571917	23571765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23571800_23571900
ES.886.1	chr1	-	304	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAGAAGAACT	NA	False	NA	NA	False	NA	NA	NA	85188281	85187977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_85188000_85188300
ES.8860.1	chr13	-	4354	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-26	128	-26	-128	multi-exon	FALSE	canonical	3	221	junction_1	5.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCTGTGATGTTTGGTT	NA	False	NA	NA	False	TATAAA	-30	NA	23608062	23602658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23606506_23606652_23606853_23607755
ES.8860.2	chr13	-	1312	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	-37	3181	-37	-3181	multi-exon	FALSE	canonical	3	221	junction_1	5.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTAGTTTTTCATT	NA	False	NA	-20	True	AATAAA	-18	NA	23608073	23605711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23606506_23606652_23606853_23607755
ES.8860.3	chr13	-	1041	2	NIC	ENSMUSG00000036376.4	novel	4456	3	NA	NA	32	-3183	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTTTTTAGTTTTTCA	NA	False	NA	-22	True	AATAAA	-16	NA	23608004	23605713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23606506_23607755
ES.8861.1	chr13	-	195	1	Intergenic	novelGene_7253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACTTCAGGTACA	NA	False	NA	NA	False	NA	NA	NA	23609908	23609713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23609700_23609900
ES.8862.1	chr13	-	492	2	NIC	ENSMUSG00000085024.2	novel	623	4	NA	NA	76	13	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTATGTTATGTTTAT	7635	False	NA	NA	False	AATAAA	-33	NA	23614920	23612131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23612583_23614879
ES.8862.2	chr13	-	558	4	NIC	ENSMUSG00000085024.2	novel	623	4	NA	NA	67	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTTTGAAGTATATGT	7430	False	NA	NA	False	AATAAA	-19	NA	23615125	23612145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23612223_23612474_23612586_23614398_23614523_23614879
ES.8862.3	chr13	-	2833	1	NIC	ENSMUSG00000085024.2	novel	623	4	NA	NA	78	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTCTTCCTGTATGGC	7441	False	NA	NA	False	AATAAA	-27	NA	23615114	23612281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23612300_23615100
ES.8863.1	chr13	-	4110	1	FSM	ENSMUSG00000113440.2	ENSMUST00000221461.2	4114	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTTTTATTAGCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	23630101	23625991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23626000_23630100
ES.8863.2	chr13	-	3295	2	Genic_Genomic	ENSMUSG00000113440.2	novel	4114	1	NA	NA	4	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAATGTTTTATTAGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	23630101	23625992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_23628922_23629735
ES.8864.1	chr13	-	5305	8	NNC	ENSMUSG00000053216.16	novel	2226	10	NA	NA	0	3534	intron_retention	TRUE	non_canonical	0	0	junction_1	2.38190457150472	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGGTGATCTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	23673010	23658311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23660194_23660865_23663012_23664619_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672805
ES.8864.2	chr13	-	3909	8	FSM	ENSMUSG00000053216.16	ENSMUST00000110433.10	2370	8	11	-1550	1	1550	multi-exon	FALSE	canonical	1	1	junction_2	2.18529407725405	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGTTTAACAACTTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	23673016	23660295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672805
ES.8864.3	chr13	-	3813	8	NNC	ENSMUSG00000053216.16	novel	2370	8	NA	NA	-6790	1376	intron_retention	FALSE	canonical	0	0	junction_4	2.38190457150472	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGTTGTTGAAAAATC	4816	False	NA	NA	False	ATTAAA	-12	NA	23679817	23660469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666139_23666888_23667171_23670298_23670647_23672002_23672133_23679551
ES.8864.4	chr13	-	3024	7	NIC	ENSMUSG00000053216.16	novel	2089	8	NA	NA	-2	621	intron_retention	FALSE	canonical	0	0	junction_6	2.49443825784929	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATATGAACAGTGTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	23673029	23661224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_23663012_23664619_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672864
ES.8864.5	chr13	-	3279	3	NNC	ENSMUSG00000053216.16	novel	2109	7	NA	NA	-2	620	intron_retention	FALSE	non_canonical	0	0	junction_1	2.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCATATGAACAGTGTC	NA	False	NA	NA	False	ATTAAA	-20	NA	23673029	23661225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23664171_23672022_23672133_23672805
ES.8864.6	chr13	-	2908	7	NNC	ENSMUSG00000053216.16	novel	2370	8	NA	NA	-6795	619	intron_retention	FALSE	canonical	0	0	junction_6	1.97202659436654	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTCATATGAACAGTGT	4811	False	NA	NA	False	ATTAAA	-19	NA	23679822	23661226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23679551
ES.8864.7	chr13	-	2973	9	NNC	ENSMUSG00000053216.16	novel	2370	8	NA	NA	2	465	intron_retention	FALSE	canonical	0	0	junction_4	2.49687304442977	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCCTGGCTTCACTCTAT	NA	False	NA	NA	False	NA	NA	NA	23672998	23661380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666412_23666580_23666888_23667171_23670298_23670647_23672002_23672133_23672805
ES.8865.1	chr13	-	166	1	Intergenic	novelGene_7254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATCCCCTATGACCTT	7061	False	NA	NA	False	NA	NA	NA	23691396	23691230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23691200_23691400
ES.8866.1	chr13	+	110	1	Intergenic	novelGene_7255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGAAACAAAACAAAAC	5542	False	NA	NA	False	NA	NA	NA	23701370	23701480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_23701400_23701500
ES.8867.1	chr13	+	425	1	FSM	ENSMUSG00000060981.8	ENSMUST00000102972.6	470	1	37	8	37	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTTGAAATGATTGTGC	4598	False	NA	NA	False	ATTAAA	-19	NA	23715256	23715681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23715300_23715700
ES.8868.1	chr13	+	3496	2	Genic_Genomic	ENSMUSG00000099517.3_ENSMUSG00000061991.3	novel	530	1	NA	NA	-62	2351	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCGGTCTCTGTGTTCTTTG	7355	False	NA	NA	False	NA	NA	NA	23718013	23722472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_23718478_23719440
ES.8868.2	chr13	+	3255	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	-385	-2340	-385	2340	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGATGGCATCGGTCTC	8548	False	NA	NA	False	NA	NA	NA	23719206	23722461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23719200_23722500
ES.8869.1	chr13	+	178	1	Intergenic	novelGene_7256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	23724220	23724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_23724200_23724400
ES.887.1	chr1	+	168	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAACCGGAGCAAGTG	6860	False	NA	NA	False	NA	NA	NA	85283783	85283951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85283800_85284000
ES.8870.1	chr13	-	645	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	61	-2	61	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGCCCACTAGGACAT	8875	False	NA	NA	False	AATAAA	-25	NA	23755333	23754688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23754700_23755300
ES.8870.2	chr13	-	496	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	61	147	61	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATTCAGTAAAGTGCT	8875	False	NA	NA	False	AAAACA	-23	NA	23755333	23754837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23754800_23755300
ES.8871.1	chr13	+	400	1	FSM	ENSMUSG00000061482.8	ENSMUST00000102968.3	1138	1	-30	768	-30	-768	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCTCACTTAAAGGAG	1883	False	NA	3	True	NA	NA	NA	23765550	23765950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23765600_23766000
ES.8872.1	chr13	-	157	1	Intergenic	novelGene_7257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3455	False	NA	NA	False	NA	NA	NA	23800227	23800070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23800100_23800200
ES.8873.1	chr13	-	204	1	Intergenic	novelGene_7258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAGGAGTTCTCTCA	NA	False	NA	NA	False	NA	NA	NA	23852946	23852742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_23852700_23852900
ES.8874.1	chr13	-	1110	1	FSM	ENSMUSG00000069270.7	ENSMUST00000171127.4	2482	1	-13	1385	-13	-1385	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGGTGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	23867944	23866834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23866800_23867900
ES.8874.2	chr13	-	486	1	FSM	ENSMUSG00000069270.7	ENSMUST00000171127.4	2482	1	-12	2008	-12	-2008	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTTTCAAAAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	23867943	23867457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23867500_23867900
ES.8875.1	chr13	+	725	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	3	428	3	-428	multi-exon	FALSE	canonical	3	53	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGCGTCATGTTA	186	False	NA	NA	False	NA	NA	NA	23868184	23876463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23868605_23876158
ES.8876.1	chr13	-	374	1	FSM	ENSMUSG00000060678.6	ENSMUST00000102967.3	820	1	-4	450	-4	-450	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTCCTAGGAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	23882441	23882067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23882100_23882400
ES.8877.1	chr13	-	479	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	81	70	81	-70	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTCATGTAAAGTTGC	4713	False	NA	-3	True	AAAAAG	-20	NA	23929504	23929025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23929000_23929500
ES.8878.1	chr13	+	668	1	FSM	ENSMUSG00000069267.3	ENSMUST00000091703.3	620	1	78	-126	78	126	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTACATATTACAATAAG	1619	False	NA	NA	False	ATTAAA	-5	NA	23936327	23936995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23936300_23937000
ES.8879.1	chr13	+	396	1	FSM	ENSMUSG00000069266.6	ENSMUST00000102965.4	397	1	-23	24	-23	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATTCCTTAAAAAGCT	6264	False	NA	NA	False	ACTAAA	-45	NA	23940972	23941368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23941000_23941400
ES.888.1	chr1	+	1567	16	Fusion	ENSMUSG00000026222.17_ENSMUSG00000118607.2	novel	1197	10	NA	NA	7	-2	multi-exon	FALSE	non_canonical	0	0	junction_1	0.653197264742181	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTGGTTGACTTTT	NA	False	NA	NA	False	GATAAA	-20	NA	85454329	85629291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_85454437_85587423_85587584_85590193_85590363_85591246_85591319_85592999_85593066_85594634_85594725_85597722_85597804_85601345_85601493_85602915_85602988_85606779_85606831_85608806_85608861_85621979_85622031_85624726_85624832_85627327_85627471_85628837_85628871_85629125
ES.888.2	chr1	+	216	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAACTTAGACTAGAGTC	2591	False	NA	NA	False	AAGAAA	-19	NA	85603669	85603885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85603700_85603900
ES.8880.1	chr13	-	488	1	FSM	ENSMUSG00000069265.3	ENSMUST00000091701.3	534	1	13	33	13	-33	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATTTCAAGTAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	23946356	23945868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_23945900_23946400
ES.8881.1	chr13	+	370	1	FSM	ENSMUSG00000049539.4	ENSMUST00000055770.4	741	1	0	371	0	-371	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGCTGAACAAGAAGGCT	NA	False	NA	NA	False	AATAAA	-44	NA	23947648	23948018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_23947600_23948000
ES.8882.1	chr13	-	1352	11	FSM	ENSMUSG00000021337.9	ENSMUST00000021770.8	1412	11	51	9	51	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATAAAGATGTGTTTGA	3105	False	NA	NA	False	AATAAA	-10	NA	24175146	24137447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_24137968_24143660_24143730_24146106_24146167_24146764_24146811_24150822_24150879_24157942_24158021_24158790_24158848_24162792_24162883_24165462_24165556_24173756_24173828_24174934
ES.8883.1	chr13	+	2651	27	Intergenic	novelGene_7259	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGTTGAAAATCCG	NA	False	NA	NA	False	NA	NA	NA	24253678	24464785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24253788_24257920_24258055_24259594_24259726_24265913_24266011_24272960_24273054_24276487_24276560_24278382_24278560_24282790_24282844_24282943_24283042_24283562_24283647_24290291_24290362_24292472_24292577_24295791_24295868_24295994_24296075_24299457_24299564_24305823_24305906_24321116_24321215_24323271_24323363_24325641_24325715_24338660_24338734_24338965_24339039_24339371_24339478_24348785_24348906_24357598_24357661_24362191_24362244_24460442_24460538_24464543
ES.8883.3	chr13	+	6157	12	Intergenic	novelGene_7260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGTTGAAAATCCG	NA	False	NA	NA	False	NA	NA	NA	24300825	24464785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24305913_24321127_24321217_24323275_24323363_24325641_24325715_24338660_24338734_24338965_24339035_24339369_24339478_24348785_24348906_24357598_24357661_24362191_24362244_24460442_24460538_24464543
ES.8883.4	chr13	+	6164	12	Intergenic	novelGene_7261	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGTTGAAAATCCG	NA	False	NA	NA	False	NA	NA	NA	24300825	24464785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24305906_24321116_24321215_24323271_24323363_24325641_24325715_24338660_24338734_24338965_24339036_24339369_24339478_24348785_24348906_24357598_24357661_24362191_24362244_24460442_24460538_24464543
ES.8883.5	chr13	+	4168	5	Intergenic	novelGene_7262	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGTTGAAAATCCG	NA	False	NA	NA	False	NA	NA	NA	24345188	24464785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24348906_24357598_24357661_24362191_24362244_24460442_24460538_24464543
ES.8883.6	chr13	+	8699	4	Intergenic	novelGene_7263	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGAGTTGAAAATCCG	NA	False	NA	NA	False	NA	NA	NA	24345188	24464785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24348906_24357598_24362244_24460442_24460538_24464543
ES.8883.7	chr13	+	143	1	Intergenic	novelGene_7264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAAGAAAT	3301	False	NA	NA	False	NA	NA	NA	24400732	24400875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24400700_24400900
ES.8883.8	chr13	+	1172	1	Intergenic	novelGene_7265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24409944	24411116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24409900_24411100
ES.8883.9	chr13	+	2927	1	Intergenic	novelGene_7267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGGTCATCCTCAGCTA	4819	False	NA	NA	False	NA	NA	NA	24438890	24441817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24438900_24441800
ES.8884.10	chr13	-	4955	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-278	-200	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	34.5000916887276	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGATCTTGGGCACAGT	NA	False	NA	NA	False	NA	NA	NA	24465056	24196841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.11	chr13	-	5046	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-411	-200	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	32.6455797551678	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGATCTTGGGCACAGT	NA	False	NA	NA	False	NA	NA	NA	24465189	24196841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.12	chr13	-	5243	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-470	199	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGATCTTGGGCAC	NA	False	NA	NA	False	NA	NA	NA	24465248	24196844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.13	chr13	-	5178	2	Intergenic	novelGene_7266	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24436863	24431621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_24436752_24436815
ES.8884.2	chr13	-	5466	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-453	3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	32.6455797551678	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTTCTTCCAGTTCTT	NA	False	NA	2	True	AATAAA	-19	NA	24465231	24196463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.3	chr13	-	5625	37	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-471	3	combination_of_known_junctions	FALSE	canonical	3	145	junction_10	17.5664523143855	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTTCTTCCAGTTCTT	NA	False	NA	2	True	AATAAA	-19	NA	24465249	24196463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.6	chr13	-	5549	38	NNC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-275	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	44.6029803745302	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGACTTCTTCCAGTT	NA	False	NA	-1	True	AATAAA	-16	NA	24465053	24196466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24356434_24356558_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8884.8	chr13	-	5252	36	NIC	ENSMUSG00000021338.18	novel	4988	38	NA	NA	-225	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_32	34.7577505671727	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTTGACTTCTTCCAG	NA	False	NA	-3	True	AATAAA	-14	NA	24465003	24196468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ES.8885.1	chr13	+	179	1	Intergenic	novelGene_7268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGATGAAATAG	NA	False	NA	NA	False	NA	NA	NA	24667085	24667264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24667100_24667300
ES.8886.1	chr13	+	3222	13	NNC	ENSMUSG00000036006.21	novel	3371	15	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.640095478989051	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGTCACGTTTCCC	8645	False	NA	NA	False	AATAAA	-16	NA	24822694	24889982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_24822920_24853942_24854070_24855737_24855894_24857014_24857098_24859742_24859812_24861706_24861857_24864610_24864675_24873448_24873493_24877748_24877875_24878099_24878249_24879555_24879686_24885044_24885714_24888752
ES.8886.2	chr13	+	214	1	Intergenic	novelGene_7269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGCTTCTCAGCCATTC	NA	False	NA	NA	False	NA	NA	NA	24875448	24875662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24875400_24875700
ES.8886.3	chr13	+	5423	4	ISM	ENSMUSG00000036006.21	ENSMUST00000091694.10	3142	14	79082	-4	5892	4	intron_retention	FALSE	canonical	0	0	junction_2	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCACGTTTCCCACGGGT	NA	False	NA	NA	False	AATAAA	-22	NA	24877674	24889988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_24877875_24878099_24878249_24879555_24879686_24885044
ES.8886.4	chr13	+	4535	13	NIC	ENSMUSG00000036006.21	novel	5476	23	NA	NA	5914	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.18731723739792	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTAGTGTAGAATCTGA	NA	False	NA	3	True	AATAAA	-17	NA	24877696	24917787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_24877875_24878099_24878249_24879555_24879686_24885044_24885714_24890073_24890259_24894105_24894275_24897604_24897741_24899272_24899435_24901529_24901689_24905613_24905817_24907691_24907776_24908928_24909020_24915567
ES.8887.1	chr13	+	180	1	Intergenic	novelGene_7270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	24924323	24924503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24924300_24924500
ES.8888.1	chr13	-	1036	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-63	-10	-63	10	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGTTTATTTCT	NA	False	NA	2	True	AATAAA	-36	NA	24945969	24935817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ES.8888.11	chr13	-	934	7	NNC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	592.830615681148	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCGTGGAGAATTAAGT	NA	False	NA	-10	True	AATAAA	-24	NA	24945920	24935829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_24936214_24937330_24937401_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ES.8888.12	chr13	-	1123	7	FSM	ENSMUSG00000006715.12	ENSMUST00000176890.8	749	7	-40	-334	-4	-9	multi-exon	FALSE	canonical	1	1	junction_6	603.044060487199	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTATGTCGTGGAGA	NA	False	NA	-17	True	AATAAA	-17	NA	24945463	24935836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945183
ES.8888.13	chr13	-	918	6	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-22	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	633.234743203498	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTATGTCGTGGAGA	NA	False	NA	-17	True	AATAAA	-17	NA	24945928	24935836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24945795
ES.8888.14	chr13	-	3766	2	NIC	ENSMUSG00000006715.12	novel	387	5	NA	NA	-14	-2871	intron_retention	FALSE	canonical	3	1483	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATAAGTCTTGCCTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	24945920	24940559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24944201_24945795
ES.8888.15	chr13	-	5346	1	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	1	-2871	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATAAGTCTTGCCTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	24945905	24940559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24940600_24945900
ES.8888.16	chr13	-	2907	3	NIC	ENSMUSG00000006715.12	novel	387	5	NA	NA	-15	-2871	intron_retention	FALSE	canonical	3	1483	junction_2	58.5	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATAAGTCTTGCCTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	24945921	24940559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24940719_24941578_24944201_24945795
ES.8888.3	chr13	-	974	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	-6	-245	-6	-1	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945465	24935828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
ES.8888.4	chr13	-	967	7	NNC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	595.861397940457	282	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945920	24935828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_24936214_24937339_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ES.8888.7	chr13	-	1161	7	FSM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	-35	1	1	-1	multi-exon	FALSE	canonical	1	1	junction_6	603.044060487199	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945879	24935828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945569
ES.8888.8	chr13	-	2100	6	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	-21	-1	intron_retention	FALSE	canonical	3	1483	junction_5	88.2006802694855	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGTGGAGAATTAAGTG	NA	False	NA	-9	True	AATAAA	-25	NA	24945927	24935828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ES.8888.9	chr13	-	5057	5	ISM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	-15	2	-15	-2	intron_retention	FALSE	canonical	3	1516	junction_3	47.6313972081441	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCGTGGAGAATTAAGT	NA	False	NA	-10	True	AATAAA	-24	NA	24945921	24935829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578
ES.8889.1	chr13	+	181	1	Intergenic	novelGene_7271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGACCATGCCATATT	NA	False	NA	3	True	NA	NA	NA	24960678	24960859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24960700_24960900
ES.889.1	chr1	-	659	4	NNC	ENSMUSG00000070034.14	novel	2583	3	NA	NA	-5072	566	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGGGGTTTTGTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	85531610	85522607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_85522913_85523682_85523831_85526349_85526501_85531555
ES.8890.1	chr13	+	166	1	Intergenic	novelGene_7272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGG	7748	False	NA	NA	False	NA	NA	NA	24972030	24972196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_24972000_24972200
ES.8891.1	chr13	+	3804	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-539	2584	-539	953	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTCTACACCATCC	NA	False	NA	21	True	AATAAA	-23	NA	24985100	24997596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.10	chr13	+	2945	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	460	2444	97	1093	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATAGCTTTTACTTT	NA	False	NA	-2	True	AATGAA	-14	NA	24986099	24997736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.11	chr13	+	2611	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	530	2708	167	829	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAACCGAGAAACATTC	NA	False	NA	-51	True	ATTAAA	-33	NA	24986169	24997472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.12	chr13	+	2717	5	NNC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	174	948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	60.1851310541067	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATACTGGTTTCTACAC	NA	False	NA	16	True	AATAAA	-18	NA	24986176	24997591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_24987493_24988764_24988936_24989844_24989968_24993868_24994004_24996619
ES.8891.13	chr13	+	2135	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	730	2984	367	553	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCAGAGCACTGTCAG	NA	False	NA	8	True	NA	NA	NA	24986369	24997196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.14	chr13	+	3723	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	873	1253	510	-1253	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTCAGCCTGTGT	NA	False	NA	NA	False	AATGAA	-30	NA	24986512	24998927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.15	chr13	+	1934	5	NNC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	1283	1276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.3219874929432	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGGAA	NA	False	NA	64	True	NA	NA	NA	24987285	24997919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_24987493_24988764_24988933_24989844_24989969_24993868_24994004_24996619
ES.8891.16	chr13	+	1884	5	NNC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	1343	1276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.0109638578405	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGGAA	NA	False	NA	64	True	NA	NA	NA	24987345	24997919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996617
ES.8891.17	chr13	+	6712	3	NIC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	1366	1325	intron_retention	FALSE	canonical	3	109	junction_1	22	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCTACTCAGATGGATG	NA	False	NA	113	True	AATAAA	-15	NA	24987368	24997968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_24987493_24988764_24994004_24996619
ES.8891.18	chr13	+	4896	2	NIC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	3435	306	intron_retention	FALSE	canonical	3	153	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTGTGAAAGAAGGTG	NA	False	NA	-65	True	TTTAAA	-23	NA	24989437	24996949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_24994004_24996619
ES.8891.19	chr13	+	3750	2	ISM	ENSMUSG00000019132.12	ENSMUST00000155575.2	600	5	4914	-639	4914	639	3prime_fragment	FALSE	canonical	3	153	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCATCTCATTGAG	529	False	NA	94	True	AAAAAG	-32	NA	24990916	24997282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_24994004_24996619
ES.8891.2	chr13	+	4180	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-520	2189	-520	1348	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAGCAGTGATAAGGT	NA	False	NA	136	True	AATAAA	-38	NA	24985119	24997991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.20	chr13	+	5904	1	NIC	ENSMUSG00000019132.12	novel	5849	5	NA	NA	6063	1326	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTACTCAGATGGATGT	1678	False	NA	114	True	AATAAA	-16	NA	24992065	24997969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_24992100_24998000
ES.8891.21	chr13	+	2431	2	ISM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	8227	1267	7864	-1267	3prime_fragment	FALSE	canonical	3	153	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCAACCGCTTGAAAAAT	3479	False	NA	NA	False	AATGAA	-16	NA	24993866	24998913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_24994004_24996619
ES.8891.5	chr13	+	3215	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-478	3112	-478	425	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTGTGGTCTTCATG	NA	False	NA	10	True	NA	NA	NA	24985161	24997068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.6	chr13	+	3061	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-440	3228	-440	309	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGAAAGAAGGTGCAT	NA	False	NA	-62	True	TTTAAA	-26	NA	24985199	24996952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.7	chr13	+	3820	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-265	2294	-265	1243	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTTGTATTTAGCTTC	NA	False	NA	31	True	AGTAAA	-17	NA	24985374	24997886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.8	chr13	+	3776	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	264	1809	-99	1728	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCCATTTGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	24985903	24998371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8891.9	chr13	+	3530	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	333	1986	-30	1551	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGATCCAGAGGCCAGT	NA	False	NA	NA	False	TATAAA	-20	NA	24985972	24998194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ES.8892.1	chr13	+	174	1	Intergenic	novelGene_7273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	25006040	25006214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25006000_25006200
ES.8893.1	chr13	+	4839	1	Intergenic	novelGene_7274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATCACAAAACCCACAC	NA	False	NA	NA	False	NA	NA	NA	25008563	25013402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25008600_25013400
ES.8894.1	chr13	-	725	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	-5	1	-5	-1	multi-exon	FALSE	canonical	3	260	junction_1	3	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGAAGTATTTTCTT	4812	False	NA	-4	True	AATAAA	-18	NA	25015505	25001931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25002175_25004697_25004883_25015208
ES.8894.2	chr13	-	450	3	NNC	ENSMUSG00000006717.8	novel	721	3	NA	NA	8823	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	130	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGCTAAGGAAGTATTT	NA	False	NA	-8	True	AATAAA	-14	NA	25006677	25001935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25002175_25004697_25004883_25006651
ES.8894.3	chr13	-	5597	2	ISM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	5442	8	5442	-8	3prime_fragment	FALSE	canonical	3	260	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGTAGCTAAGGAAGTA	NA	False	NA	-11	True	AATAAA	-11	NA	25010058	25001938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_25002175_25004697
ES.8895.1	chr13	+	2043	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	-87	1	-87	0	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015574	25026135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.10	chr13	+	2678	7	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-7	intron_retention	FALSE	canonical	2	9	junction_2	306.805041244979	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGACTACGACTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	25015663	25026128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25015992_25016810_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.11	chr13	+	6616	4	NIC	ENSMUSG00000035958.4	novel	1771	6	NA	NA	0	-6	intron_retention	FALSE	canonical	3	768	junction_2	47.2252286624662	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015663	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.12	chr13	+	1436	8	NNC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-320	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	372.57400305859	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGCTAACGTTTTAC	NA	False	NA	18	True	AATAAA	-19	NA	25015663	25025468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25015913_25015992_25016079_25016660_25016810_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.13	chr13	+	2792	7	NNC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-9	intron_retention	FALSE	canonical	0	0	junction_2	310.129945882905	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGACTGACTACGACTTT	NA	False	NA	11	True	AATAAA	-11	NA	25015663	25026126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25015913_25015992_25016926_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.14	chr13	+	1201	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-320	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGCTAACGTTTTAC	NA	False	NA	18	True	AATAAA	-19	NA	25015663	25025468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.15	chr13	+	5955	5	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	768	junction_3	42.2337246759033	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25015663	25026136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.16	chr13	+	1957	7	NNC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	1	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	310.129945882905	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015664	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25015913_25015992_25016079_25019988_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.17	chr13	+	6537	5	NIC	ENSMUSG00000035958.4	novel	1421	6	NA	NA	3	-2	intron_retention	FALSE	canonical	3	768	junction_3	46.8268085609088	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTACGACTTTTTTCTTC	NA	False	NA	18	True	AATAAA	-18	NA	25015666	25026133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25015992_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.18	chr13	+	5208	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	3	-316	intron_retention	FALSE	canonical	3	768	junction_4	44.4882006828777	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTAACGTTTTACTTTG	NA	False	NA	22	True	AATAAA	-23	NA	25015666	25025472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25015992_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.19	chr13	+	1475	3	NIC	ENSMUSG00000035958.4	novel	1421	6	NA	NA	5	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	421	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015668	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25024370_25024542_25025069
ES.8895.2	chr13	+	1893	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	-29	-6	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015632	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.21	chr13	+	1473	2	FSM	ENSMUSG00000035958.4	ENSMUST00000223804.2	1136	2	6	-343	2	343	multi-exon	FALSE	canonical	3	778	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGCCACTGTTCTTTCC	NA	False	NA	NA	False	AATAAA	-31	NA	25015680	25017233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25015913_25015992
ES.8895.23	chr13	+	1654	5	NIC	ENSMUSG00000035958.4	novel	1421	6	NA	NA	22	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	360.285997507536	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015700	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.24	chr13	+	1070	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225138.2	1421	6	31	320	31	-320	multi-exon	FALSE	canonical	3	8	junction_2	326.497534447046	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGCTAACGTTTTAC	NA	False	NA	18	True	AATAAA	-19	NA	25015709	25025468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25015913_25015992_25016079_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.25	chr13	+	5537	1	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	213	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25020599	25026136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25020600_25026100
ES.8895.3	chr13	+	1814	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225138.2	1421	6	-46	-347	-29	0	multi-exon	FALSE	canonical	3	8	junction_2	326.497534447046	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015632	25026135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25015913_25015992_25016079_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.4	chr13	+	2105	8	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	-18	-7	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	371.669756858512	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGACTACGACTTTTT	NA	False	NA	13	True	AATAAA	-13	NA	25015643	25026128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25015992_25016079_25016671_25016810_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.5	chr13	+	2140	8	NNC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	-15	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	372.347654095207	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015646	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25015913_25015992_25016079_25016634_25016810_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.6	chr13	+	5876	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	768	junction_4	44.4882006828777	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015661	25026135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_25015913_25015992_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.7	chr13	+	1373	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	0	584	0	-236	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTGGGCTTTGGTT	NA	False	NA	102	True	AATAAA	-19	NA	25015661	25025552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.8	chr13	+	2097	8	NNC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	372.57400305859	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	False	NA	14	True	AATAAA	-14	NA	25015663	25026129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25015913_25015992_25016079_25016660_25016810_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8895.9	chr13	+	2034	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225490.2	1771	6	-263	0	0	0	multi-exon	FALSE	canonical	3	768	junction_4	61.475198251002	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015663	25026135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ES.8896.1	chr13	-	175	1	Intergenic	novelGene_7275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	25022675	25022500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_25022500_25022700
ES.8897.1	chr13	+	5790	22	NNC	ENSMUSG00000006711.16	novel	4973	21	NA	NA	12	886	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.940400840863405	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCTTGTGACCCA	NA	False	NA	NA	False	AATAAA	-24	NA	25029129	25086139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25029283_25038392_25038539_25040634_25041411_25041903_25042094_25046620_25046720_25047576_25047675_25048715_25048804_25051071_25051165_25055236_25055370_25056201_25056431_25059891_25060016_25061917_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603_25084848_25084904
ES.8897.2	chr13	+	3857	13	NNC	ENSMUSG00000006711.16	novel	4827	20	NA	NA	-6793	881	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.06718737290547	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGATCCTGTCTTGTG	1502	False	NA	NA	False	AATAAA	-19	NA	25057714	25086134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25057788_25059891_25060020_25061917_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603_25084848_25084904
ES.8898.1	chr13	+	223	1	Intergenic	novelGene_7276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGGGAGTGGGGAGTAA	NA	False	NA	NA	False	NA	NA	NA	25114800	25115023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25114800_25115000
ES.8899.1	chr13	+	1151	2	FSM	ENSMUSG00000086448.2	ENSMUST00000154919.2	3836	2	-208	2893	-208	-2893	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGTGGAGTCAAATGTT	NA	False	NA	NA	False	AATAAA	-24	NA	25121175	25122507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25121587_25121767
ES.89.1	chr1	+	2522	2	Antisense	novelGene_ENSMUSG00000067851.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTAGTGTCTTTGTATG	NA	False	NA	NA	False	AATAAA	-23	NA	10302381	10306329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_10304579_10306004
ES.890.1	chr1	+	179	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	3615	False	NA	NA	False	NA	NA	NA	85653679	85653858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85653700_85653900
ES.8900.1	chr13	-	5640	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	10	-3	10	3	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTGTGTTGGTTTT	NA	False	NA	4	True	AATAAA	-34	NA	25121634	25091558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ES.8900.3	chr13	-	4901	8	ISM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	11664	100	11664	-100	3prime_fragment	FALSE	canonical	3	44	junction_1	4.07080195679286	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGTACACATTGCTTC	NA	False	NA	-99	True	AATATA	-12	NA	25109980	25091661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960
ES.8900.4	chr13	-	3820	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	33	1794	33	-1794	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGCATTTTGCCTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	25121611	25093355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ES.8900.6	chr13	-	2539	11	NNC	ENSMUSG00000035936.7	novel	5647	10	NA	NA	-1976	-3937	intron_retention	FALSE	canonical	0	0	junction_10	15.4673850407882	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATCCATTTTTTAC	NA	False	NA	-2	True	AATAAA	-20	NA	25123620	25095498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233_25122347_25123493
ES.8900.7	chr13	-	1863	11	NNC	ENSMUSG00000035936.7	novel	5647	10	NA	NA	20	-3942	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.4636262671111	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGACATTCCATCCATTT	NA	False	NA	-7	True	AATAAA	-15	NA	25121624	25095503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25114402_25114581_25121233
ES.8901.1	chr13	-	7006	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	32	-3	32	3	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGACATTGTCATTGCA	NA	False	NA	4	True	AATAAA	-20	NA	25204330	25171462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.10	chr13	-	6899	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	101	-9	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	74.8868479774653	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATCAGCAGTCTGGAC	NA	False	NA	-8	True	AATAAA	-8	NA	25204261	25171474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.11	chr13	-	6505	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	37	493	37	-493	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTCATTGAAAGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	25204325	25171958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.12	chr13	-	6484	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	-502	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	59.3461034946693	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAGTACTCATTGAA	NA	False	NA	NA	False	NA	NA	NA	25204296	25171967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.14	chr13	-	6890	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	-560	intron_retention	FALSE	canonical	3	167	junction_4	19.1820389240547	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAGTGTAATTTAATT	NA	False	NA	NA	False	NA	NA	NA	25204296	25172025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.15	chr13	-	6364	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	68	-560	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	57.9731834558014	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAGTGTAATTTAATT	NA	False	NA	NA	False	NA	NA	NA	25204294	25172025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.16	chr13	-	6791	9	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	65	-560	intron_retention	FALSE	canonical	2	3	junction_3	87.37267521943	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAGTGTAATTTAATT	NA	False	NA	NA	False	NA	NA	NA	25204297	25172025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177767_25178707_25178826_25179327_25179481_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.17	chr13	-	6474	12	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	-565	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	75.7537332358845	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATATAAGAGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	25204296	25172030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25202886_25202957_25204064
ES.8901.18	chr13	-	6269	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	82	-566	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.9679883186546	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAATATAAGAGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	25204280	25172031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.19	chr13	-	6256	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	74	-588	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	64.5194965270093	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAAATGGAAAT	NA	False	NA	NA	False	NA	NA	NA	25204288	25172053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.2	chr13	-	6851	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	64.9679883186546	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTGGACATTGTCATT	NA	False	NA	1	True	AATAAA	-17	NA	25204296	25171465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.20	chr13	-	6725	2	ISM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	25103	588	-477	-588	intron_retention	FALSE	canonical	3	177	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAAAAATGGAAAT	NA	False	NA	NA	False	NA	NA	NA	25179259	25172053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_25177172_25177652
ES.8901.22	chr13	-	11352	6	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	62	-1836	intron_retention	FALSE	canonical	1	1	junction_2	82.251808490756	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTCTCCTTTCTATT	NA	False	NA	NA	False	ACTAAA	-22	NA	25204300	25173301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25178826_25179327_25183034_25185609_25185784_25188925_25189039_25190421_25190459_25202502
ES.8901.23	chr13	-	6932	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	44	-1839	intron_retention	FALSE	canonical	3	172	junction_3	17.562586496426	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTATGTCTCCTTTCT	NA	False	NA	NA	False	ACTAAA	-19	NA	25204318	25173304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.24	chr13	-	4573	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	22	2440	22	-2440	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTCTCTCTTTGTT	NA	False	NA	NA	False	CATAAA	-31	NA	25204340	25173905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.25	chr13	-	3689	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	82	3264	82	2869	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAATGTTTATTTGGGCTC	NA	False	NA	NA	False	NA	NA	NA	25204280	25174729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.26	chr13	-	3304	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	42	3689	42	2444	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGCTTTTGTCCATCC	NA	False	NA	NA	False	NA	NA	NA	25204320	25175154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.27	chr13	-	3275	12	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	20	2344	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	93.3128568644126	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTTGGATTTCTGTAA	NA	False	NA	NA	False	AATACA	-22	NA	25204342	25175254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181090_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25202886_25202957_25204064
ES.8901.28	chr13	-	3184	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	61	3790	61	2343	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTTTGGATTTCTGTA	NA	False	NA	NA	False	AATACA	-21	NA	25204301	25175255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.29	chr13	-	4515	8	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	54	2341	intron_retention	FALSE	canonical	2	3	junction_2	72.5410510099809	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGTTTGGATTTCTG	NA	False	NA	NA	False	AATACA	-19	NA	25204308	25175257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25179481_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.3	chr13	-	7012	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	39	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	59.3461034946693	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCTGGACATTGTCAT	NA	False	NA	0	True	AATAAA	-16	NA	25204323	25171466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.30	chr13	-	3167	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	47	2338	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	74.8868479774653	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGATGTTTGGATTT	NA	False	NA	NA	False	AATACA	-16	NA	25204315	25175260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.31	chr13	-	2005	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	74	4956	74	1177	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTTTTGATGATTGC	NA	False	NA	NA	False	TTTAAA	-31	NA	25204288	25176421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.32	chr13	-	3417	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	42	690	intron_retention	FALSE	canonical	1	2	junction_10	88.848691605448	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGGTTTCTTTGTAA	NA	False	NA	9	True	ACTAAA	-32	NA	25204320	25176908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25202886_25202957_25204064
ES.8901.33	chr13	-	4935	9	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	681	intron_retention	FALSE	canonical	0	0	junction_3	69.3451512364059	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGACTAAGAAGAGGTT	NA	False	NA	0	True	ACTAAA	-23	NA	25204296	25176917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178934_25179327_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.34	chr13	-	1539	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	42	5454	42	679	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTGAGACTAAGAAGAGG	NA	False	NA	-2	True	ACTAAA	-21	NA	25204320	25176919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.35	chr13	-	5355	8	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	37	678	intron_retention	FALSE	canonical	3	177	junction_1	13.2849462143573	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTGAGACTAAGAAGAG	NA	False	NA	-3	True	ACTAAA	-20	NA	25204325	25176920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.36	chr13	-	1541	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	54	676	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	59.3461034946693	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTTGAGACTAAGAAG	NA	False	NA	-5	True	ACTAAA	-44	NA	25204308	25176922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.37	chr13	-	4909	10	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	65	675	intron_retention	FALSE	canonical	1	2	junction_9	92.5994960389454	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTTTGAGACTAAGAA	NA	False	NA	-6	True	ACTAAA	-43	NA	25204297	25176923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25202886_25202957_25204064
ES.8901.38	chr13	-	1467	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	674	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	57.9731834558014	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTTTGAGACTAAGA	NA	False	NA	-7	True	ACTAAA	-42	NA	25204296	25176924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.39	chr13	-	3314	10	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	57	672	intron_retention	FALSE	canonical	2	5	junction_5	62.4962221080425	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATTCTTTGAGACTAA	NA	False	NA	-9	True	ACTAAA	-40	NA	25204305	25176926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.4	chr13	-	6909	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	42	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	77.9220122943447	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTCTGGACATTGTC	NA	False	NA	-2	True	AATAAA	-14	NA	25204320	25171468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181090_25182907_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.40	chr13	-	4840	9	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	39	667	intron_retention	FALSE	canonical	3	172	junction_3	16.8226038412607	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTCAGAATTCTTTGAG	NA	False	NA	-14	True	ACTAAA	-35	NA	25204323	25176931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.41	chr13	-	4759	9	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	66	656	intron_retention	FALSE	canonical	3	9	junction_5	64.7437255647217	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGATCACATCTTCAG	NA	False	NA	-25	True	ACTAAA	-24	NA	25204296	25176942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.42	chr13	-	4814	9	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	65	650	intron_retention	FALSE	canonical	2	5	junction_4	66.281478370658	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTAAACTTGATCACAT	NA	False	NA	-31	True	ACTAAA	-18	NA	25204297	25176948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.43	chr13	-	1379	6	ISM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	66	10824	66	487	5prime_fragment	FALSE	canonical	3	208	junction_4	5.56417109729742	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTCCTGGTGTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	25204296	25182289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.5	chr13	-	8769	10	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	43	-3	intron_retention	FALSE	canonical	3	172	junction_3	17.562586496426	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTCTGGACATTGTC	NA	False	NA	-2	True	AATAAA	-14	NA	25204319	25171468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.6	chr13	-	10267	9	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	70	-8	intron_retention	FALSE	canonical	3	172	junction_3	16.8226038412607	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	False	NA	-7	True	AATAAA	-9	NA	25204292	25171473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.7	chr13	-	6196	1	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	1113	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	False	NA	-7	True	AATAAA	-9	NA	25177669	25171473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25171500_25177700
ES.8901.8	chr13	-	6919	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	65	-8	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	57.9731834558014	197	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	False	NA	-7	True	AATAAA	-9	NA	25204297	25171473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185741_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ES.8901.9	chr13	-	7015	12	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	82	-8	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	75.7537332358845	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	False	NA	-7	True	AATAAA	-9	NA	25204280	25171473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25202886_25202957_25204064
ES.8902.1	chr13	+	2097	11	NNC	ENSMUSG00000035910.16	novel	6634	10	NA	NA	-722	425	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	5.69209978830308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTGCAATTTAGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	25239264	25389943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25239425_25240186_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
ES.8902.2	chr13	+	6901	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-269	2	-20	-2	multi-exon	FALSE	canonical	3	14	junction_2	2.86744175568088	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCACTGAGGTTCAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	25239966	25394687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
ES.8902.3	chr13	+	2394	11	NNC	ENSMUSG00000035910.16	novel	6634	10	NA	NA	-18	783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.69209978830308	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAACTTTTTATTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	25239968	25390301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_25240068_25240186_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
ES.8902.4	chr13	+	1961	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-74	4747	-74	424	multi-exon	FALSE	canonical	3	14	junction_2	2.86744175568088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGCAATTTAGTTT	NA	False	NA	NA	False	AATAAA	-11	NA	25240161	25389942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
ES.8902.5	chr13	+	2847	1	Intergenic	novelGene_7277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25270474	25273321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25270500_25273300
ES.8902.6	chr13	+	3356	1	Intergenic	novelGene_7279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25351359	25354715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25351400_25354700
ES.8903.1	chr13	-	3038	1	Intergenic	novelGene_7278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTAAGTCTGGTCATGT	NA	False	NA	NA	False	NA	NA	NA	25314248	25311210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_25311200_25314200
ES.8904.1	chr13	-	1965	1	Intergenic	novelGene_7280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGCTTTCACACATAC	NA	False	NA	NA	False	NA	NA	NA	25377804	25375839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_25375800_25377800
ES.8905.1	chr13	-	2206	5	NIC	ENSMUSG00000048978.15	novel	2222	4	NA	NA	21	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	2.87228132326901	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTGTGTGTGGTGTT	NA	False	NA	-5	True	AATAAA	-13	NA	25453932	25436026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_25437735_25446182_25446383_25452004_25452074_25452535_25452657_25453824
ES.8906.1	chr13	+	177	1	Intergenic	novelGene_7281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGATATCA	NA	False	NA	NA	False	NA	NA	NA	25477511	25477688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25477500_25477700
ES.8907.1	chr13	+	179	1	Intergenic	novelGene_7282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25786349	25786528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_25786300_25786500
ES.8908.1	chr13	+	2284	2	Intergenic	novelGene_7283	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCCGGTTTGCTGCGT	2235	False	NA	NA	False	NA	NA	NA	28144718	28152843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_28144939_28150779
ES.8909.1	chr13	-	4021	1	Intergenic	novelGene_7284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	28312482	28308461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_28308500_28312500
ES.8909.2	chr13	-	5965	3	Intergenic	novelGene_7285	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	28315248	28308463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_28310949_28311144_28313653_28314276
ES.891.1	chr1	+	3844	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	-36	-3	-36	3	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGTCCTTTAGACAGT	NA	False	NA	18	True	AATAAA	-19	NA	85721125	85779300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.10	chr1	+	3385	5	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-2	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	162.31200664153	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCTTGTGATGTC	NA	False	NA	7	True	AATAAA	-8	NA	85721159	85779289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85721543_85746077_85746235_85763043_85763209_85775997_85776142_85776753
ES.891.11	chr1	+	3650	8	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	143.774341328659	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85721159	85779297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85721543_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.12	chr1	+	3918	10	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	161.294072357845	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85721165	85779297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85721543_85723077_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.13	chr1	+	3871	10	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	166.016732757742	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGATGTCCTTTAG	NA	False	NA	13	True	AATAAA	-14	NA	85721168	85779295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775651_85775727_85775997_85776142_85776753
ES.891.14	chr1	+	3672	10	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.091393187038	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGTGATGTCCT	NA	False	NA	9	True	AATAAA	-10	NA	85721169	85779291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721361_85721479_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.15	chr1	+	3795	9	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	134.540363367281	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTGATGTCCTTT	NA	False	NA	11	True	AATAAA	-12	NA	85721175	85779293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746077_85746235_85763035_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.16	chr1	+	3774	9	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	134.717064620634	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGTGATGTCCT	NA	False	NA	9	True	AATAAA	-10	NA	85721177	85779291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746086_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.17	chr1	+	698	3	NNC	ENSMUSG00000036707.17	novel	580	4	NA	NA	18	9285	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	166.5	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85721179	85755519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746077_85746235_85755341
ES.891.18	chr1	+	4226	11	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	24	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	181.038697520723	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGATGTCCTTTAG	NA	False	NA	13	True	AATAAA	-14	NA	85721185	85779295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85723077_85723195_85731684_85732015_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.2	chr1	+	4017	10	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-28	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	162.773720085944	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTTGTGATGTCCT	NA	False	NA	9	True	AATAAA	-10	NA	85721133	85779291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746077_85746235_85755898_85756089_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.20	chr1	+	3250	9	NIC	ENSMUSG00000036707.17	novel	2369	10	NA	NA	255	-641	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	129.536433098955	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTGTCAAGTGTGGA	NA	False	NA	16	True	AATAAA	-16	NA	85721516	85777445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.21	chr1	+	2091	9	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	9675	-230	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	132.449459700672	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGAACCAATCC	NA	False	NA	NA	False	NA	NA	NA	85731906	85777856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85732015_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.22	chr1	+	1679	9	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	9676	-641	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	132.449459700672	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTGTCAAGTGTGGA	NA	False	NA	16	True	AATAAA	-16	NA	85731907	85777445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85732015_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.23	chr1	+	4274	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATTATTCTTATTTTA	NA	False	NA	NA	False	NA	NA	NA	85748907	85753181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85748900_85753200
ES.891.24	chr1	+	5454	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTTCTGTTGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	85750115	85755569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85750100_85755600
ES.891.25	chr1	+	3093	6	ISM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	43843	11	-5796	-11	3prime_fragment	FALSE	canonical	3	356	junction_2	24.3836010466051	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAAACTGTCTTGTGAT	NA	False	NA	4	True	AATAAA	-5	NA	85765004	85779286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.26	chr1	+	4201	5	ISM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	47535	4	-2104	-4	3prime_fragment	FALSE	canonical	3	356	junction_1	19.6516538744198	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTGATGTCCTTT	NA	False	NA	11	True	AATAAA	-12	NA	85768696	85779293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.27	chr1	+	2542	1	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	5951	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTTGTGATGTCCTTT	NA	False	NA	11	True	AATAAA	-12	NA	85776751	85779293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85776800_85779300
ES.891.3	chr1	+	4020	10	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-23	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	164.08474173163	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATGTCCTTTAGACAG	NA	False	NA	17	True	AATAAA	-18	NA	85721138	85779299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85772693_85772884_85775130_85775197_85775997_85776142_85776753
ES.891.5	chr1	+	3756	10	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.091393187038	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTGATGTCCTTTA	NA	False	NA	12	True	AATAAA	-13	NA	85721139	85779294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721313_85721380_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.7	chr1	+	2377	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	-13	1441	-13	-230	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGAACCAATCC	NA	False	NA	NA	False	NA	NA	NA	85721148	85777856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.8	chr1	+	1958	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	-5	1852	-5	-641	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTGTCAAGTGTGGA	NA	False	NA	16	True	AATAAA	-16	NA	85721156	85777445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.891.9	chr1	+	3974	11	NNC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	184.334614220987	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCTTGTGATGTC	NA	False	NA	7	True	AATAAA	-8	NA	85721158	85779289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85721543_85723081_85723195_85727780_85727842_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ES.8910.1	chr13	+	174	1	Intergenic	novelGene_7286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	28326778	28326952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_28326800_28327000
ES.8911.1	chr13	+	401	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	209	-3	209	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTTAGTAATATTG	NA	False	NA	-1	True	AATAAA	-18	NA	28441719	28442120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_28441700_28442100
ES.8911.2	chr13	+	331	2	Genic_Genomic	ENSMUSG00000113061.2	novel	607	1	NA	NA	219	-3	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGAAAAAAATTTAGTA	NA	False	NA	-7	True	AATAAA	-12	NA	28441729	28442114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_28441846_28441899
ES.8912.1	chr13	+	173	1	Intergenic	novelGene_7287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACTTTACAGAAC	NA	False	NA	NA	False	NA	NA	NA	28508049	28508222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_28508000_28508200
ES.8913.1	chr13	-	210	1	Intergenic	novelGene_7288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAGAATATCACCCACAG	NA	False	NA	NA	False	NA	NA	NA	28566991	28566781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_28566800_28567000
ES.8914.1	chr13	+	157	1	Intergenic	novelGene_7289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	28822786	28822943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_28822800_28822900
ES.8915.1	chr13	-	158	1	Intergenic	novelGene_7290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	28862395	28862237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_28862200_28862400
ES.8916.1	chr13	+	176	1	Intergenic	novelGene_7291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	28987451	28987627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_28987500_28987600
ES.8917.1	chr13	+	169	1	Intergenic	novelGene_7292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTGTCTGG	NA	False	NA	NA	False	NA	NA	NA	29028267	29028436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29028300_29028400
ES.8918.1	chr13	+	2829	1	Antisense	novelGene_ENSMUSG00000076431.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCATTAAGAAAGTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	29135452	29138281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_29135500_29138300
ES.8918.2	chr13	+	513	2	Antisense	novelGene_ENSMUSG00000076431.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGATTGCTGCTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	29135961	29142136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_29136210_29141871
ES.8919.1	chr13	-	4829	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	-34	0	-34	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	False	NA	0	True	AATAAA	-24	NA	29137730	29132901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29132900_29137700
ES.8919.2	chr13	-	3735	2	Genic_Genomic	ENSMUSG00000076431.5	novel	4795	1	NA	NA	14	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	False	NA	0	True	AATAAA	-24	NA	29137682	29132901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_29133652_29134697
ES.8919.3	chr13	-	3901	2	Genic_Genomic	ENSMUSG00000076431.5	novel	4795	1	NA	NA	16	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTGACTTTTGTCATC	NA	False	NA	-3	True	AATAAA	-21	NA	29137680	29132904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_29134873_29135747
ES.8919.4	chr13	-	4712	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	-26	109	-26	-109	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCCAGCTAATCCTGTC	NA	False	NA	-109	True	AAAAAG	-9	NA	29137722	29133010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29133000_29137700
ES.8919.5	chr13	-	2238	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	-26	2583	-26	-2583	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATAGAGCTGGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	29137722	29135484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29135500_29137700
ES.892.1	chr1	-	4620	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGCTGGTGAGATGGCT	2360	False	NA	NA	False	NA	NA	NA	85734214	85729594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_85729600_85734200
ES.8920.1	chr13	+	170	1	Intergenic	novelGene_7293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAAAAAGACCA	3106	False	NA	NA	False	NA	NA	NA	29155103	29155273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29155100_29155300
ES.8921.1	chr13	+	876	6	NNC	ENSMUSG00000086363.8	novel	682	4	NA	NA	2	6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	2.0591260281974	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAGTTATAGTTTCTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	29200277	29212786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_29200375_29200692_29200863_29207158_29207196_29207613_29207707_29208701_29208799_29212404
ES.8922.1	chr13	-	179	1	Intergenic	novelGene_7294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTTTAAAAATAGGC	NA	False	NA	NA	False	NA	NA	NA	29330705	29330526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_29330500_29330700
ES.8923.1	chr13	+	160	1	Antisense	novelGene_ENSMUSG00000006191.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	29509572	29509732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_29509600_29509700
ES.8924.1	chr13	+	3970	1	Intergenic	novelGene_7296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAAAGACCCATGGACA	NA	False	NA	NA	False	NA	NA	NA	29731611	29735581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29731600_29735600
ES.8925.1	chr13	+	2988	1	Intergenic	novelGene_7298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTAGCTATTGATCA	NA	False	NA	NA	False	NA	NA	NA	29871822	29874810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29871800_29874800
ES.8925.2	chr13	+	2273	8	Antisense	novelGene_ENSMUSG00000006191.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATCTAGCCACTTTT	NA	False	NA	NA	False	NA	NA	NA	29873673	30039030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_29873893_29874314_29875701_29893075_29893125_29901701_29901801_29961199_29961285_30030210_30030326_30033923_30034097_30038883
ES.8925.3	chr13	+	2942	1	Intergenic	novelGene_7300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTCAGAGCAGGGGGA	NA	False	NA	NA	False	NA	NA	NA	29917519	29920461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29917500_29920500
ES.8925.4	chr13	+	4011	1	Intergenic	novelGene_7301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCTAGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	29928363	29932374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_29928400_29932400
ES.8925.5	chr13	+	5757	1	Intergenic	novelGene_7302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30013548	30019305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_30013500_30019300
ES.8925.6	chr13	+	3355	1	Antisense	novelGene_ENSMUSG00000006191.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATCTAGCCACTTTT	NA	False	NA	NA	False	NA	NA	NA	30035675	30039030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_30035700_30039000
ES.8926.1	chr13	-	1251	9	NNC	ENSMUSG00000006191.18	novel	2019	12	NA	NA	-34881	64749	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.2248999691597	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGCATCTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	29736318	29444534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_29444817_29472162_29472277_29483864_29483974_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211
ES.8926.12	chr13	-	2992	16	NNC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	75	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	46.7938267533467	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAGAAAACACTGTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	30039547	29509294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039061
ES.8926.13	chr13	-	2320	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	14	295	3	-295	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCCCGTGCTACAAACAT	NA	False	NA	NA	False	AATAAA	-22	NA	30039643	29509578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.14	chr13	-	2570	1	Intergenic	novelGene_7295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCACTTCACAGGTAAA	NA	False	NA	NA	False	AATACA	-34	NA	29551007	29548437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_29548400_29551000
ES.8926.15	chr13	-	1656	13	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	26	118477	-1	-2	5prime_fragment	FALSE	canonical	3	156	junction_1	16.5797734872612	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAATTGCTTGCATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	30039631	29627760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.16	chr13	-	5283	10	ISM	ENSMUSG00000006191.18	ENSMUST00000153086.8	4383	11	-17	33787	3	-26157	5prime_fragment	FALSE	canonical	3	157	junction_6	16.6340421432883	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAGAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30039643	29731976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.17	chr13	-	5233	1	NIC	ENSMUSG00000006191.18	novel	3372	17	NA	NA	-35776	-26161	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	29737213	29731980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_29732000_29737200
ES.8926.18	chr13	-	4377	11	NNC	ENSMUSG00000006191.18	novel	907	7	NA	NA	1	-26191	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9627948752517	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	30039639	29732010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_29732898_29733765_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.19	chr13	-	4520	1	Intergenic	novelGene_7297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAAAACCTTGGATGCC	NA	False	NA	NA	False	CATAAA	-5	NA	29794446	29789926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_29789900_29794400
ES.8926.2	chr13	-	3717	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	24	-1112	-3	1112	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGTGTTTACCTGTTC	NA	False	NA	NA	False	NA	NA	NA	30039633	29508171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.20	chr13	-	5123	1	Intergenic	novelGene_7299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATATATGTAACATTG	NA	False	NA	NA	False	AATAAA	-8	NA	29885424	29880301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_29880300_29885400
ES.8926.21	chr13	-	2219	7	NNC	ENSMUSG00000006191.18	novel	694	6	NA	NA	-3	1506	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	99.7329768264573	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGTTAAAGACTGATA	NA	False	NA	NA	False	AATACA	-18	NA	30039633	30019471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30021054_30022497_30022686_30023571_30023606_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.22	chr13	-	10512	2	ISM	ENSMUSG00000006191.18	ENSMUST00000091674.12	2427	6	5598	33515	5366	1039	internal_fragment	FALSE	canonical	3	209	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTATAGAAATGTGTGC	NA	False	NA	NA	False	AATAAA	-16	NA	30034048	30019938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_30030324_30033921
ES.8926.23	chr13	-	1683	6	NNC	ENSMUSG00000006191.18	novel	694	6	NA	NA	-1	1036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	97.3418717716071	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTGTATAGAAATGTG	NA	False	NA	NA	False	AATAAA	-13	NA	30039641	30019941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30021054_30022497_30022686_30030210_30030324_30033921_30034052_30038880_30038925_30039545
ES.8926.24	chr13	-	3177	5	NIC	ENSMUSG00000006191.18	novel	694	6	NA	NA	-4	1035	intron_retention	FALSE	canonical	3	9	junction_1	84.3593504005335	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTGTATAGAAATGT	NA	False	NA	NA	False	AATAAA	-12	NA	30039652	30019942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30022686_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.25	chr13	-	1540	5	NIC	ENSMUSG00000006191.18	novel	694	6	NA	NA	1	1035	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	85.65738438687	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTGTATAGAAATGT	NA	False	NA	NA	False	AATAAA	-12	NA	30039647	30019942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30021054_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.26	chr13	-	5245	2	NIC	ENSMUSG00000006191.18	novel	2427	6	NA	NA	1	-12796	intron_retention	FALSE	canonical	3	200	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGCTTCAAATCTGGC	NA	False	NA	NA	False	NA	NA	NA	30039639	30033773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30038925_30039545
ES.8926.27	chr13	-	423	3	ISM	ENSMUSG00000006191.18	ENSMUST00000129231.2	694	6	16	12822	-2	-12822	5prime_fragment	FALSE	canonical	3	200	junction_2	1	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30039632	30033799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_30034092_30038880_30038925_30039545
ES.8926.3	chr13	-	2629	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039657	29509283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.4	chr13	-	2656	17	NNC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.6206183983634	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039630	29509283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29753557_29753612_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.5	chr13	-	2542	15	NIC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	48.9583850774079	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039633	29509283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_29510212_29538612_29538778_29541482_29541567_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.6	chr13	-	2568	16	NNC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	47.4727524188584	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039599	29509283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875694_29893071_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8926.9	chr13	-	2352	14	NIC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	1	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.6247361012919	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAAAACACTGTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	30039639	29509293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_29510212_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ES.8927.1	chr13	+	178	1	Intergenic	novelGene_7303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	30046166	30046344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_30046200_30046300
ES.8928.1	chr13	+	1781	1	Intergenic	novelGene_7304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAAATCCTTGCGTCTC	NA	False	NA	NA	False	NA	NA	NA	30126722	30128503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_30126700_30128500
ES.8929.1	chr13	-	5139	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	-41	-1	-41	1	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGATGGATTTTCTT	NA	False	NA	-2	True	AATAAA	-23	NA	30170087	30090556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
ES.8929.11	chr13	-	4002	4	NNC	ENSMUSG00000016477.19	novel	4597	7	NA	NA	67237	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	58.7253494384381	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTGGATGGATTT	NA	False	NA	-6	True	AATAAA	-44	NA	30100987	30090560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097497_30100819
ES.8929.12	chr13	-	5018	8	NNC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	1	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	53.5556167141473	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTGGATGGATTT	NA	False	NA	-6	True	AATAAA	-44	NA	30170045	30090560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30169282_30169509_30169565
ES.8929.13	chr13	-	5232	8	NNC	ENSMUSG00000016477.19	novel	4579	7	NA	NA	-532	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	59.3677573455904	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTTGTGGATGGATTT	NA	False	NA	-6	True	AATAAA	-44	NA	30168906	30090560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30105153_30105278_30168110
ES.8929.14	chr13	-	4477	3	NIC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACTTGTGGATGGATT	NA	False	NA	-7	True	AATAAA	-43	NA	30170036	30090561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30094149_30095175_30095312_30169282
ES.8929.15	chr13	-	5044	7	NNC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	59.3595447721388	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGACTTGTGGATGGAT	NA	False	NA	-8	True	AATAAA	-42	NA	30170022	30090562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30099046_30099117_30100807_30100988_30102558_30102779_30104096_30104209_30169282
ES.8929.2	chr13	-	4694	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	-97	0	-97	0	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30168471	30090557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
ES.8929.22	chr13	-	4467	7	NNC	ENSMUSG00000016477.19	novel	4579	7	NA	NA	-532	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.9641473398574	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTTCAGACTTGTGGA	NA	False	NA	-13	True	AATAAA	-37	NA	30168906	30090567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097501_30100826_30100988_30102558_30102761_30104096_30104209_30168745
ES.8929.23	chr13	-	2230	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	-100	2467	-100	-2467	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGAGTTTTGCAAATTC	NA	False	NA	NA	False	NA	NA	NA	30168474	30093024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
ES.8929.24	chr13	-	2587	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	42	2468	42	-2468	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCGAGTTTTGCAAATT	NA	False	NA	NA	False	NA	NA	NA	30170004	30093025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
ES.8929.25	chr13	-	1903	7	NNC	ENSMUSG00000016477.19	novel	4579	7	NA	NA	10	-3196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.0514910485326	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGATGAATTAATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	30170036	30093753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30169252
ES.8929.26	chr13	-	1900	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	1	3196	1	-3196	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTGATGAATTAATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	30170045	30093753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
ES.8929.27	chr13	-	2495	4	ISM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	65614	3279	65464	-3279	intron_retention	FALSE	canonical	3	112	junction_3	6.23609564462324	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAAACGTGTATCGCA	NA	False	NA	NA	False	TATAAA	-21	NA	30102760	30093836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828
ES.8929.28	chr13	-	1289	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	27	3281	27	-3281	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCAGAAACGTGTATCG	NA	False	NA	NA	False	TATAAA	-19	NA	30168347	30093838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
ES.8929.29	chr13	-	4746	2	NIC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	67	2524	intron_retention	FALSE	canonical	3	134	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGATACTTTTCAA	NA	False	NA	NA	False	AAGAAA	-15	NA	30169979	30100159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30104209_30169282
ES.8929.3	chr13	-	5132	7	NIC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	40.4790755274321	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30170099	30090557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30169282
ES.8929.30	chr13	-	1457	3	ISM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	9	11631	9	495	5prime_fragment	FALSE	canonical	3	88	junction_1	23	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTAGCACAGGGTCTG	NA	False	NA	NA	False	NA	NA	NA	30170037	30102188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_30102779_30104096_30104209_30169282
ES.8929.7	chr13	-	4617	7	FSM	ENSMUSG00000016477.19	ENSMUST00000222730.2	4579	7	-40	2	-40	-2	multi-exon	FALSE	canonical	3	13	junction_6	51.741075451607	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTGGATGGATTTT	NA	False	NA	-5	True	AATAAA	-45	NA	30168414	30090559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30168110
ES.8929.9	chr13	-	5155	7	NNC	ENSMUSG00000016477.19	novel	5097	7	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	61.8881158938361	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTTGTGGATGGATTTT	NA	False	NA	-5	True	AATAAA	-45	NA	30170024	30090559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30094149_30095175_30095312_30097386_30097501_30100828_30100988_30102558_30102779_30104013_30104209_30169282
ES.893.1	chr1	-	176	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATAATGATTTAA	569	False	NA	NA	False	NA	NA	NA	85736005	85735829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_85735800_85736000
ES.8930.1	chr13	+	156	1	Intergenic	novelGene_7305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	30280381	30280537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_30280400_30280500
ES.8931.1	chr13	+	2906	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	13	-14	13	14	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGTGTGTATTTTCACA	NA	False	NA	NA	False	CATAAA	-20	NA	30320484	30430714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
ES.8931.2	chr13	+	2740	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	51	114	51	-114	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGGCCTGAAAGGTGA	NA	False	NA	NA	False	NA	NA	NA	30320522	30430586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
ES.8932.1	chr13	-	6629	1	Genic_Genomic	ENSMUSG00000038462.4	novel	NA	NA	NA	NA	46	1620	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTTATAGAGCATAACAT	NA	False	NA	NA	False	NA	NA	NA	30729299	30722670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_30722700_30729300
ES.8932.2	chr13	-	2957	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	22	-1616	22	1616	multi-exon	FALSE	canonical	3	2063	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCCTTATAGAGCATA	NA	False	NA	NA	False	NA	NA	NA	30729323	30722674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30725325_30729016
ES.8932.3	chr13	-	1751	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	77	-465	77	465	multi-exon	FALSE	canonical	3	2063	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAATAAAAATAAAA	NA	False	NA	NA	False	TATAAA	-38	NA	30729268	30723825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30725325_30729016
ES.8932.4	chr13	-	1411	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	10	-58	10	58	multi-exon	FALSE	canonical	3	2063	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCCTCAAACTTGTA	NA	False	NA	56	True	NA	NA	NA	30729335	30724232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30725325_30729016
ES.8932.5	chr13	-	1328	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	-108	143	-108	-143	multi-exon	FALSE	canonical	3	2063	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTCTCATCTAAATTT	NA	False	NA	-14	True	AATAAA	-20	NA	30729453	30724433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30725325_30729016
ES.8933.1	chr13	-	180	1	Intergenic	novelGene_7306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAGAA	9991	False	NA	NA	False	NA	NA	NA	30782276	30782096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_30782100_30782300
ES.8934.1	chr13	+	3011	7	NNC	ENSMUSG00000069255.14	novel	1161	8	NA	NA	-426	-6	intron_retention	FALSE	canonical	0	0	junction_1	12.3883906227654	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACATCATGTGCAGTG	NA	False	NA	3	True	AATAAA	-16	NA	30843555	30895208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_30843604_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ES.8934.2	chr13	+	3192	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-178	1	-76	-1	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCATGTGCAGTGTGTTC	NA	False	NA	8	True	AATAAA	-21	NA	30843905	30895213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ES.8934.3	chr13	+	5355	5	NIC	ENSMUSG00000069255.14	novel	2994	6	NA	NA	-67	-8	intron_retention	FALSE	canonical	0	0	junction_3	15.1657508881031	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACATCATGTGCAG	NA	False	NA	1	True	AATAAA	-14	NA	30843914	30895206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_30844130_30852787_30852822_30856375_30856459_30889608_30892085_30892659
ES.8934.4	chr13	+	2788	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	-165	392	-63	-392	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGATTTGTATACTTGTT	NA	False	NA	NA	False	AAAAAG	-35	NA	30843918	30894822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ES.8934.5	chr13	+	5955	5	FSM	ENSMUSG00000069255.14	ENSMUST00000110310.9	2319	5	-102	-3534	-40	-6	multi-exon	FALSE	canonical	3	31	junction_4	2.58602010819715	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACATCATGTGCAGTG	NA	False	NA	3	True	AATAAA	-16	NA	30843941	30895208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608
ES.8934.6	chr13	+	1066	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	87	8	14	-8	multi-exon	FALSE	canonical	3	16	junction_7	7.4258236676383	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACATCATGTGCAG	NA	False	NA	1	True	AATAAA	-14	NA	30844068	30895206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ES.8934.7	chr13	+	3073	8	NNC	ENSMUSG00000069255.14	novel	3015	7	NA	NA	-9	-6	intron_retention	FALSE	canonical	0	0	junction_3	14.7205257226439	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACATCATGTGCAGTG	NA	False	NA	3	True	AATAAA	-16	NA	30844074	30895208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_30844130_30852787_30852822_30856375_30856459_30877689_30877745_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ES.8935.1	chr13	-	3198	28	Fusion	ENSMUSG00000113515.2_ENSMUSG00000021357.15	novel	1441	6	NA	NA	13	-4762	multi-exon	FALSE	canonical	0	0	junction_1	32.7342879513478	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTGCTTACTGTGA	NA	False	NA	NA	False	NA	NA	NA	31158024	30973177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_30973606_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.11	chr13	-	7961	14	NIC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	43456	-1	intron_retention	FALSE	canonical	3	112	junction_13	17.3358744913171	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	-3	True	AATAAA	-19	NA	31066356	30997902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231
ES.8935.12	chr13	-	4676	31	NNC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.4600145756233	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	-3	True	AATAAA	-19	NA	31158009	30997902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31023797_31023918_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059302_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31105369_31105642_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
ES.8935.13	chr13	-	5572	28	ISM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	2558	1	2558	-1	3prime_fragment	FALSE	canonical	3	27	junction_27	28.4917623404029	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	-3	True	AATAAA	-19	NA	31131723	30997902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347
ES.8935.18	chr13	-	4322	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	32.5178435768984	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTGTGTTTGTGTCTTC	NA	False	NA	-3	True	AATAAA	-19	NA	31158009	30997902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157883
ES.8935.2	chr13	-	4295	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-38	-1	1	1	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	31158075	30997900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.21	chr13	-	4382	29	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	28	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	40.302174955236	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGTGTTTGTGTCTT	NA	False	NA	-4	True	AATAAA	-18	NA	31158009	30997903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31069928_31070085_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.23	chr13	-	4278	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.4038956968444	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTGTGTTTGTGTCTT	NA	False	NA	-4	True	AATAAA	-18	NA	31158005	30997903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31051983_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157883
ES.8935.26	chr13	-	4302	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	2567	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_27	32.5178435768984	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTATGTTGTGTTTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	31131714	30997907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31131603
ES.8935.27	chr13	-	4183	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	-41	114	-2	-114	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGTCCTTCTCTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	31158078	30998015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.28	chr13	-	4033	27	NIC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	28	-114	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	33.3192376508397	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGTCCTTCTCTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	31158009	30998015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.3	chr13	-	4130	27	NIC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	33.2433425287712	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	False	NA	-1	True	AATAAA	-21	NA	31158036	30997900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.31	chr13	-	4280	30	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	28	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	46.5207559828685	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGTAGTTGTCCTTC	NA	False	NA	NA	False	AATAAA	-11	NA	31158009	30998022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31105369_31105438_31105536_31105642_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.32	chr13	-	4108	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	15	-121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	32.7458517880944	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGTAGTTGTCCTTC	NA	False	NA	NA	False	AATAAA	-11	NA	31158022	30998022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111389_31119473_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.33	chr13	-	4139	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	1	-121	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	32.7498730350736	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGTAGTTGTCCTTC	NA	False	NA	NA	False	AATAAA	-11	NA	31158050	30998022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055110_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.34	chr13	-	3084	28	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	2	-1183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.3885024223603	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGTCCTGAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	31158049	30999084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040774_31048809_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.36	chr13	-	2421	23	NNC	ENSMUSG00000021357.15	novel	4256	28	NA	NA	1	-1183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	43.4523582561008	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGTCCTGAAAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	31109811	30999084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061219_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084768_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705
ES.8935.39	chr13	-	3103	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	28	-1184	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTGGTCCTGAAAGGC	NA	False	NA	NA	False	AATAAA	-17	NA	31158009	30999085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
ES.8935.4	chr13	-	8057	29	NNC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	42.8670821807815	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	-2	True	AATAAA	-20	NA	31158051	30997901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31070085_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
ES.8935.40	chr13	-	2873	28	NNC	ENSMUSG00000021357.15	novel	1441	6	NA	NA	4	-2459	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.7342879513478	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCTCTTTACTTTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	31158047	31000360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_31000441_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ES.8935.41	chr13	-	1240	1	FSM	ENSMUSG00000076430.2	ENSMUST00000102943.2	1187	1	-2	-51	-2	51	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATTCTCCTTTTAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	31131744	31130504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_31130500_31131700
ES.8935.42	chr13	-	4445	1	Intergenic	novelGene_7307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31144087	31139642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_31139600_31144100
ES.8935.7	chr13	-	4356	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	-2	True	AATAAA	-20	NA	31158078	30997901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
ES.8936.1	chr13	-	3902	3	Intergenic	novelGene_7308	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTTTTTGGCATAA	NA	False	NA	NA	False	ATTAAA	-14	NA	31505514	31486089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_31489484_31490307_31490710_31505408
ES.8937.1	chr13	+	2646	1	FSM	ENSMUSG00000038415.11	ENSMUST00000042118.11	4843	1	2193	4	2193	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTTTGTGATAGTAG	NA	False	NA	NA	False	AATAAA	-18	NA	31742309	31744955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_31742300_31745000
ES.8938.1	chr13	+	4120	1	Intergenic	novelGene_7310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACAGATAGTCAAAGTAA	NA	False	NA	NA	False	NA	NA	NA	31854332	31858452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_31854300_31858500
ES.8939.1	chr13	-	4599	1	Intergenic	novelGene_7309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTATATTGGCTT	NA	False	NA	NA	False	NA	NA	NA	31857050	31852451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_31852500_31857000
ES.8939.2	chr13	-	591	2	Intergenic	novelGene_7311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTGGCCACTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	31865444	31856920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_31857213_31865145
ES.894.1	chr1	-	6958	1	Antisense	novelGene_ENSMUSG00000036707.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACCTATTCTGATTT	NA	False	NA	NA	False	NA	NA	NA	85766591	85759633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_85759600_85766600
ES.8940.1	chr13	+	173	1	Intergenic	novelGene_7312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAGAAAGATA	NA	False	NA	NA	False	NA	NA	NA	31867924	31868097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_31867900_31868100
ES.8941.1	chr13	-	632	5	Intergenic	novelGene_7313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAATTGATTCAACCAGC	NA	False	NA	NA	False	AATAAA	-21	NA	31964131	31957803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_31957873_31958525_31958779_31962702_31962817_31963424_31963534_31964044
ES.8942.1	chr13	+	4056	1	FSM	ENSMUSG00000050295.5	ENSMUST00000062292.5	5844	1	-45	1833	-45	-1833	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTACGTGGCCTCTGA	NA	False	NA	NA	False	AATAAA	-24	NA	31990570	31994626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_31990600_31994600
ES.8942.2	chr13	+	1696	1	FSM	ENSMUSG00000050295.5	ENSMUST00000062292.5	5844	1	1246	2902	1246	-2902	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTATATGTCTGAATACTT	NA	False	NA	NA	False	AATAAA	-22	NA	31991861	31993557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_31991900_31993600
ES.8943.1	chr13	+	109	1	Intergenic	novelGene_7314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACACCTGTACTGCAG	NA	False	NA	NA	False	NA	NA	NA	32009819	32009928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_32009800_32009900
ES.8944.1	chr13	-	1711	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	5	-3	5	3	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTATGTTTTC	NA	False	NA	-1	True	ATTAAA	-29	NA	32522718	32003558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ES.8944.10	chr13	-	5000	1	Intergenic	novelGene_7317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGTTGTGCTTATA	NA	False	NA	NA	False	NA	NA	NA	32446395	32441395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_32441400_32446400
ES.8944.2	chr13	-	1478	9	NIC	ENSMUSG00000038372.15	novel	1713	11	NA	NA	30	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	29.2529378866465	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAACAGAGTTTGCTGT	NA	False	NA	-11	True	ATTAAA	-19	NA	32522693	32003568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32418335_32418381_32522364
ES.8944.4	chr13	-	191	1	Intergenic	novelGene_7315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAATGTTCTTAGAGTT	NA	False	NA	NA	False	NA	NA	NA	32037248	32037057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_32037100_32037200
ES.8944.5	chr13	-	175	1	Intergenic	novelGene_7316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATATTTAC	NA	False	NA	NA	False	NA	NA	NA	32079197	32079022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_32079000_32079200
ES.8944.6	chr13	-	3327	10	NNC	ENSMUSG00000038372.15	novel	2003	7	NA	NA	-3	-93807	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.8428571067016	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCATTTCTTATTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	32522610	32097368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_32099563_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312085_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ES.8944.7	chr13	-	2754	5	NIC	ENSMUSG00000038372.15	novel	382	4	NA	NA	-3	1757	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	36.2422405488402	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGTTTATATTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	32522610	32339555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_32341821_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ES.8944.8	chr13	-	1978	5	NNC	ENSMUSG00000038372.15	novel	382	4	NA	NA	21	-9421	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0978436030991	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAAGATCTTAATATTAA	NA	False	NA	NA	False	AATAAA	-21	NA	32522702	32350733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_32352131_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ES.8944.9	chr13	-	2637	5	NNC	ENSMUSG00000038372.15	novel	382	4	NA	NA	14	29442	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0978436030991	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTCCTCACCTCTGCT	NA	False	NA	NA	False	AATAAA	-31	NA	32522593	32379772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_32381938_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ES.8945.1	chr13	-	208	1	Intergenic	novelGene_7318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAGATCATGAAATTT	NA	False	NA	NA	False	NA	NA	NA	32559384	32559176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_32559200_32559400
ES.8946.1	chr13	-	159	1	Intergenic	novelGene_7319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	758	False	NA	NA	False	NA	NA	NA	32897395	32897236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_32897200_32897400
ES.8947.1	chr13	+	2669	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	-30	-6	-30	6	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTCAGTGTTCCTCCT	NA	False	NA	20	True	AATAAA	-21	NA	32985990	33006598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
ES.8947.3	chr13	+	4931	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	-10	12129	-10	-5786	5prime_fragment	FALSE	canonical	3	161	junction_2	15	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTTCTGTGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	32986010	32994463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_32987028_32989320_32989513_32990741
ES.8947.4	chr13	+	4059	5	FSM	ENSMUSG00000021400.9	ENSMUST00000220560.2	3982	5	-76	-1	2	-1	multi-exon	FALSE	canonical	3	161	junction_2	24.914855006602	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGTTCTTCAGTGT	NA	False	NA	13	True	AATAAA	-14	NA	32986022	33006591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201
ES.8947.5	chr13	+	3291	6	NIC	ENSMUSG00000021400.9	novel	2633	7	NA	NA	4	0	intron_retention	FALSE	canonical	3	161	junction_2	22.3571017799714	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTCAGTTCTTCAGTG	NA	False	NA	12	True	AATAAA	-13	NA	32986024	33006590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33005102_33005866
ES.8947.6	chr13	+	8385	1	NIC	ENSMUSG00000021400.9	novel	2633	7	NA	NA	-20	-5786	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTTCTGTGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	32986078	32994463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_32986100_32994500
ES.8947.7	chr13	+	6362	5	NIC	ENSMUSG00000021400.9	novel	2633	7	NA	NA	592	-1	intron_retention	FALSE	canonical	3	161	junction_2	21.2308737455621	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAGTTCTTCAGTGT	NA	False	NA	13	True	AATAAA	-14	NA	32986690	33006591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33005102_33005866
ES.8948.1	chr13	-	1945	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5	-32	5	32	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGTTTCTTCTAGAAA	4874	False	NA	NA	False	AATAAA	-16	NA	33035163	33026042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ES.8948.2	chr13	-	2039	7	NIC	ENSMUSG00000044734.17	novel	1918	7	NA	NA	5	-34	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	59.5018673843286	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAAGAATTTGTGG	4874	False	NA	NA	False	AATAAA	-20	NA	33035163	33026108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33034964
ES.8948.3	chr13	-	1331	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	-30	617	-30	-617	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCTTTTGTATGTTC	4839	False	NA	0	True	AATAAA	-18	NA	33035198	33026691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ES.8948.4	chr13	-	1485	6	NIC	ENSMUSG00000044734.17	novel	1918	7	NA	NA	5	-622	intron_retention	FALSE	canonical	3	136	junction_5	11.5412304370028	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATCTTTCTTTTGTA	4874	False	NA	-5	True	AATAAA	-13	NA	33035163	33026696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_33027206_33029291_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ES.8948.5	chr13	-	1402	7	NIC	ENSMUSG00000044734.17	novel	1918	7	NA	NA	31	-624	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	59.5018673843286	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCAATCTTTCTTTTG	4921	False	NA	-7	True	AATAAA	-11	NA	33035116	33026698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33034964
ES.8949.1	chr13	-	179	1	Intergenic	novelGene_7320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTATGTCAGAATTT	NA	False	NA	NA	False	NA	NA	NA	33069452	33069273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_33069300_33069500
ES.895.1	chr1	+	2010	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	252	-32	-86	32	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTGTTGTGGCTAAA	NA	False	NA	24	True	NA	NA	NA	85822253	85836428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
ES.895.2	chr1	+	2982	5	NIC	ENSMUSG00000026223.16	novel	2230	6	NA	NA	-54	17	intron_retention	FALSE	canonical	3	205	junction_3	10.8742815854658	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCTGACTTTGGCCCT	NA	False	NA	9	True	NA	NA	NA	85822285	85836413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85822511_85830730_85830872_85832934_85834254_85834728_85834880_85835267
ES.8950.1	chr13	+	1895	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	293	5	-1	0	multi-exon	TRUE	canonical	0	0	junction_3	2.08166599946613	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTTCTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	33149484	33163045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ES.8951.1	chr13	+	2325	7	FSM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	-3	1075	-3	-1075	multi-exon	FALSE	canonical	1	2	junction_3	1.73205080756888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGATGTGATTCCTTTAT	NA	False	NA	NA	False	NA	NA	NA	33188520	33200863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_33188679_33190515_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
ES.8951.2	chr13	+	4420	2	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	6486	1080	6486	-1080	3prime_fragment	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGCCTGATGTGATTCC	2051	False	NA	NA	False	NA	NA	NA	33195009	33200858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_33198001_33199429
ES.8952.1	chr13	-	491	1	Antisense	novelGene_ENSMUSG00000045827.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33188633	33188142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_33188100_33188600
ES.8953.1	chr13	+	1832	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	120	1301	-15	-1301	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACATGCCATGGTCTTA	NA	False	NA	7	True	AATAAA	-20	NA	33211518	33224566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ES.8953.2	chr13	+	3103	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	149	1	14	-1	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAAGCCTGATCTTTAT	NA	False	NA	NA	False	NA	NA	NA	33211547	33225866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ES.8954.1	chr13	-	5166	1	Intergenic	novelGene_7321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCAGATTGGTTTCCTTG	1497	False	NA	NA	False	AATAAA	-19	NA	34049071	34043905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_34043900_34049100
ES.8955.1	chr13	+	1061	3	Antisense	novelGene_ENSMUSG00000052180.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGGATGCCCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	34089408	34091218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_34089659_34090249_34090337_34090494
ES.8956.1	chr13	-	7296	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-65	-5906	-65	5906	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	34089218	34057892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.10	chr13	-	1852	7	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-31	435	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	340.491311685531	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTTGCATCCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	34089184	34063363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083481_34089090
ES.8956.11	chr13	-	1852	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-92	-435	-92	435	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTTGCATCCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	34089245	34063363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.12	chr13	-	2569	7	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-43	435	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	337.911436457674	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTTGCATCCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	34089196	34063363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34084186_34089090
ES.8956.13	chr13	-	1781	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-18	-436	-18	435	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTTGCATCCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	34089709	34063363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
ES.8956.14	chr13	-	1485	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-155	-5	-155	5	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGTGTTTTCTAGG	NA	False	NA	-2	True	AATAAA	-24	NA	34089308	34063793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.15	chr13	-	7054	6	ISM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-53	-5	-53	5	intron_retention	FALSE	canonical	3	839	junction_2	55.1274886059577	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGTGTTTTCTAGG	NA	False	NA	-2	True	AATAAA	-24	NA	34089206	34063793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244
ES.8956.16	chr13	-	1243	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-88	5	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGTGTTTTCTAGG	NA	False	NA	-2	True	AATAAA	-24	NA	34089241	34063793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
ES.8956.17	chr13	-	1387	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-54	-6	-54	5	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCGAGTGTTTTCTAGG	NA	False	NA	-2	True	AATAAA	-24	NA	34089745	34063793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
ES.8956.18	chr13	-	1466	7	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	340.491311685531	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGAACCGAGTGTTT	NA	False	NA	-8	True	AATAAA	-18	NA	34089234	34063799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083481_34089090
ES.8956.19	chr13	-	2165	7	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	337.911436457674	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGAACCGAGTGTTT	NA	False	NA	-8	True	AATAAA	-18	NA	34089228	34063799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34084186_34089090
ES.8956.2	chr13	-	3533	6	NNC	ENSMUSG00000052180.16	novel	654	5	NA	NA	-77	5906	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	420.362510221832	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	34089230	34057892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34060716_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
ES.8956.21	chr13	-	1452	7	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-59	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	337.54291908174	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTCAGAACCGAGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	34089212	34063801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083491_34089090
ES.8956.22	chr13	-	5274	5	ISM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	3481	6	3481	-5	intron_retention	FALSE	canonical	3	839	junction_2	61.1637147334921	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCACCTTCAGAACCGAG	NA	False	NA	-13	True	AATAAA	-13	NA	34085672	34063804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326
ES.8956.23	chr13	-	1185	6	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-64	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	368.879167207908	271	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCACCTTCAGAACCGAG	NA	False	NA	-13	True	AATAAA	-13	NA	34089217	34063804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081457_34089090
ES.8956.25	chr13	-	3531	1	Genic_Genomic	ENSMUSG00000052180.16	novel	NA	NA	NA	NA	-222	-8058	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAATACTTGCAAAATT	NA	False	NA	NA	False	NA	NA	NA	34089375	34085844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34085800_34089400
ES.8956.3	chr13	-	3633	7	NNC	ENSMUSG00000052180.16	novel	654	5	NA	NA	-2	5906	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	330.457132873035	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATAGTGTC	NA	False	NA	NA	False	NA	NA	NA	34089155	34057892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34060716_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.4	chr13	-	4029	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-101	-2603	-101	2603	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTTGCTCTTTTCTGCTG	NA	False	NA	1	True	NA	NA	NA	34089254	34061195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.5	chr13	-	3826	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-74	2602	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34089227	34061196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
ES.8956.6	chr13	-	4236	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-20	2602	intron_retention	FALSE	canonical	3	772	junction_5	71.1775245425127	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34089173	34061196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8956.7	chr13	-	3948	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	-18	-2603	-18	2602	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34089709	34061196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
ES.8956.8	chr13	-	4458	8	NNC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	13	2602	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	408.837625569899	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTGCTCTTTTCTGCT	NA	False	NA	0	True	NA	NA	NA	34089140	34061196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34083641_34084186_34089090
ES.8956.9	chr13	-	2293	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	-31	-937	-31	937	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTTAGTCGTAGTGT	NA	False	NA	NA	False	NA	NA	NA	34089184	34062861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ES.8957.1	chr13	-	157	1	Intergenic	novelGene_7322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATCATTTAA	NA	False	NA	NA	False	NA	NA	NA	34096966	34096809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_34096800_34097000
ES.8958.1	chr13	+	5608	1	Antisense	novelGene_ENSMUSG00000060147.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGGTCATAA	NA	False	NA	NA	False	NA	NA	NA	34105928	34111536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_34105900_34111500
ES.8959.1	chr13	+	3655	1	Intergenic	novelGene_7323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCTAAATCGCC	NA	False	NA	NA	False	NA	NA	NA	34128050	34131705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_34128000_34131700
ES.896.1	chr1	-	1645	1	Antisense	novelGene_ENSMUSG00000026223.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGAAAATAATAAGTTCA	NA	False	NA	NA	False	NA	NA	NA	85833921	85832276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_85832300_85833900
ES.8960.1	chr13	+	1073	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	-28	2797	-28	0	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTGCACTGTATTAG	NA	False	NA	13	True	AATACA	-25	NA	34148641	34169629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.10	chr13	+	3354	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-51	-2240	13	-557	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTGAAAACAGCTTGGG	NA	False	NA	79	True	AATAAA	-23	NA	34148682	34171869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.12	chr13	+	1089	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-28	2	-28	-2	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTTGTTGCACTGTATT	NA	False	NA	11	True	AATACA	-23	NA	34148705	34169627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.13	chr13	+	4064	9	NNC	ENSMUSG00000046949.17	novel	1063	8	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	92.0230100301006	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATTCCTCTCATTTAT	NA	False	NA	11	True	ATTAAA	-15	NA	34148721	34172423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34156558_34156754_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.15	chr13	+	3898	8	FSM	ENSMUSG00000046949.17	ENSMUST00000223479.2	772	8	-41	-3085	-41	0	multi-exon	FALSE	canonical	2	2	junction_1	84.0738256728294	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	14	True	ATTAAA	-18	NA	34148947	34172426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34149036_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.2	chr13	+	3297	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	-17	562	-17	-562	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAGCTTGAAAACAGC	NA	False	NA	74	True	AATAAA	-18	NA	34148652	34171864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.3	chr13	+	3416	8	NNC	ENSMUSG00000046949.17	novel	1063	8	NA	NA	-7	-628	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.8474837632967	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTTTCTCTTAGATAT	NA	False	NA	8	True	NA	NA	NA	34148662	34171798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34148784_34152172_34152261_34156294_34156460_34156558_34156754_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.4	chr13	+	3323	1	Genic_Genomic	ENSMUSG00000046949.17	novel	NA	NA	NA	NA	-7	-17356	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACACAAGAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	34148662	34151985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_34148700_34152000
ES.8960.5	chr13	+	3104	6	NIC	ENSMUSG00000046949.17	novel	3842	7	NA	NA	-6	-630	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	76.9014954340941	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTTTTCTCTTAGAT	NA	False	NA	6	True	NA	NA	NA	34148663	34171796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34166430_34166533_34169298
ES.8960.6	chr13	+	3839	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	3	0	3	0	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	14	True	ATTAAA	-18	NA	34148672	34172426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.7	chr13	+	3946	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	-61	-2822	3	25	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATCCCCTTCCTGGTTA	NA	False	NA	39	True	ATTAAA	-43	NA	34148672	34172451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.8	chr13	+	2305	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	4	1533	4	1264	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTGGCATTGTAAATCA	NA	False	NA	NA	False	AATAAA	-16	NA	34148673	34170893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8960.9	chr13	+	1715	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	13	2114	13	683	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTTTGAGTTTTGTTA	NA	False	NA	NA	False	AATACA	-29	NA	34148682	34170312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ES.8961.1	chr13	+	3870	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	-31	-573	-31	573	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGGCTAGGCCATCATT	NA	False	NA	NA	False	NA	NA	NA	34186314	34218233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.10	chr13	+	3638	8	NIC	ENSMUSG00000021408.16	novel	3266	11	NA	NA	35	-2687	intron_retention	FALSE	canonical	1	1	junction_6	14.7523778782007	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATATGGATGTTGGACT	NA	False	NA	NA	False	CATAAA	-44	NA	34186417	34214078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34210724_34210816_34211700
ES.8961.11	chr13	+	3072	11	NNC	ENSMUSG00000021408.16	novel	6472	11	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.4324410224157	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTGTGCTGTACA	NA	False	NA	-1	True	NA	NA	NA	34186835	34217658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34186984_34193583_34193804_34194527_34194689_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.2	chr13	+	4786	11	FSM	ENSMUSG00000021408.16_ENSMUSG00000091462.3	ENSMUST00000021844.15	3266	11	-21	-1499	-21	140	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGCATCTCCTGTGCT	NA	False	NA	NA	False	AATAAA	-22	NA	34186324	34219159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.3	chr13	+	3286	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	0	-20	0	20	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTCTGTGTGCCA	NA	False	NA	21	True	NA	NA	NA	34186345	34217680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.4	chr13	+	5766	6	ISM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	1	12005	1	-14	intron_retention	FALSE	canonical	3	40	junction_2	2.57681974534502	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGTAAAAGA	NA	False	NA	NA	False	AATATA	-12	NA	34186346	34205655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979
ES.8961.5	chr13	+	4714	11	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	-8	130	multi-exon	FALSE	canonical	0	0	junction_2	18.1892825586937	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCTCATGTTGGCAT	NA	False	NA	NA	False	AATAAA	-12	NA	34186374	34219149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_34186690_34193174_34193304_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34216478
ES.8961.6	chr13	+	2588	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	47	631	10	264	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAGAAGATGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	34186392	34217029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.7	chr13	+	4822	12	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	22	133	multi-exon	FALSE	non_canonical	0	0	junction_4	16.9374151823072	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCATGTTGGCATCTC	NA	False	NA	NA	False	AATAAA	-15	NA	34186404	34219152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34198519_34198643_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.8	chr13	+	5421	10	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	23	132	intron_retention	FALSE	canonical	3	34	junction_6	4.53246178986025	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCATGTTGGCATCT	NA	False	NA	NA	False	AATAAA	-14	NA	34186405	34219151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_34186690_34193583_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ES.8961.9	chr13	+	4031	9	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	24	142	multi-exon	FALSE	canonical	0	0	junction_8	13.9008767709091	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCATCTCCTGTGCTGC	NA	False	NA	NA	False	AATAAA	-24	NA	34186406	34219161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34216478
ES.8962.1	chr13	-	1366	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	179	2	-23	-2	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTGTCTGCCTCACT	8436	False	NA	0	True	AATAAA	-26	NA	34120002	34101902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ES.8962.10	chr13	-	1667	8	NNC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	180.800939134278	125	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	34186752	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180329_34186448
ES.8962.11	chr13	-	1481	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	8	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	152.257092518615	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAGAACTGTCTGTC	8615	False	NA	-9	True	AATAAA	-17	NA	34119823	34101911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119601
ES.8962.12	chr13	-	5018	1	NIC	ENSMUSG00000060147.16	novel	1654	8	NA	NA	-887	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAGAACTGTCTGTC	6333	False	NA	-9	True	AATAAA	-17	NA	34106929	34101911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34101900_34106900
ES.8962.13	chr13	-	1214	7	NNC	ENSMUSG00000060147.16	novel	1547	7	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	165.600925923337	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTCAGAACTGTCTGT	8477	False	NA	-10	True	AATAAA	-16	NA	34119961	34101912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34102426_34102723_34102779_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ES.8962.14	chr13	-	1506	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	-14	12	-14	-3	multi-exon	FALSE	canonical	3	10	junction_7	178.591998815222	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTTCAGAACTGTCTGT	NA	False	NA	-10	True	AATAAA	-16	NA	34186791	34101912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
ES.8962.15	chr13	-	3673	4	NNC	ENSMUSG00000060147.16	novel	783	5	NA	NA	0	-12014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGAATTTATGAAA	NA	False	NA	NA	False	NA	NA	NA	34186750	34127579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34130661_34138880_34139094_34141176_34141254_34186448
ES.8962.16	chr13	-	4224	1	Antisense	novelGene_ENSMUSG00000046949.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34167898	34163674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_34163700_34167900
ES.8962.3	chr13	-	5429	6	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	182	0	34	0	intron_retention	FALSE	canonical	3	344	junction_4	61.6655495394308	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8641	False	NA	-7	True	AATAAA	-19	NA	34119797	34101909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454
ES.8962.5	chr13	-	1478	7	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	152	1	4	-1	3prime_fragment	FALSE	canonical	3	43	junction_6	141.587134537947	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	8611	False	NA	-8	True	AATAAA	-18	NA	34119827	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609
ES.8962.6	chr13	-	1346	7	NNC	ENSMUSG00000060147.16	novel	1547	7	NA	NA	-29525	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	156.073433571081	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	34149706	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34149620
ES.8962.7	chr13	-	1386	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-17	-1	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	8563	False	NA	-8	True	AATAAA	-18	NA	34119875	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
ES.8962.8	chr13	-	1672	8	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	-1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	180.800939134278	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	NA	False	NA	-8	True	AATAAA	-18	NA	34186751	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186448
ES.8962.9	chr13	-	1719	8	NIC	ENSMUSG00000060147.16	novel	1654	8	NA	NA	44	-1	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	174.090991924877	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCAGAACTGTCTGTCT	8301	False	NA	-8	True	AATAAA	-18	NA	34120137	34101910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119551_34119778_34119904
ES.8963.1	chr13	+	1417	8	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	90.1196483593237	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTAGTGTTCCTGTT	NA	False	NA	10	True	AATAAA	-12	NA	34221601	34258052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34241794_34241986_34244416_34244549_34247892_34248017_34257658
ES.8963.10	chr13	+	1216	7	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	76.1761482063484	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221631	34258057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257643
ES.8963.11	chr13	+	4526	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-7	1	intron_retention	FALSE	canonical	3	167	junction_1	24.7919341722263	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTAGTGTTCCTGTTTGC	NA	False	NA	13	True	AATAAA	-15	NA	34221632	34258055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221753_34228406_34228511_34230768_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.12	chr13	+	1134	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	96.2808392152873	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221640	34258057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221862_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.13	chr13	+	3084	6	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	2	1335	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	72.3170795870519	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATAGTTTCTGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	34221641	34249351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34246935
ES.8963.14	chr13	+	1634	3	ISM	ENSMUSG00000038286.12	ENSMUST00000222658.2	761	5	12760	-1335	1187	1335	3prime_fragment	FALSE	canonical	3	205	junction_1	18.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATAGTTTCTGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	34234374	34249351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_34234418_34244416_34244549_34247892
ES.8963.15	chr13	+	7485	1	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	-2642	1335	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATAGTTTCTGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	34241866	34249351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34241900_34249400
ES.8963.16	chr13	+	1670	1	Intergenic	novelGene_7324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAGGGACCCAC	NA	False	NA	NA	False	NA	NA	NA	34254273	34255943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_34254300_34255900
ES.8963.2	chr13	+	1224	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	29	0	-6	0	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221608	34258057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.3	chr13	+	1087	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	0	-4	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	69.9828550432176	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGTAGTGTTCCTG	NA	False	NA	8	True	AATAAA	-10	NA	34221614	34258050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34257658
ES.8963.4	chr13	+	3096	9	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	1	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.9820059404739	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTCAAATAAAATTTATG	NA	False	NA	-14	True	NA	NA	NA	34221615	34258028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34221753_34228406_34228511_34230768_34230936_34231024_34232360_34232876_34233450_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.5	chr13	+	1234	7	NNC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	99.6906325700776	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGTAGTGTTCCTG	NA	False	NA	8	True	AATAAA	-10	NA	34221615	34258050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34221753_34228406_34228511_34234263_34234418_34241794_34241986_34244416_34244549_34247892_34248017_34257658
ES.8963.6	chr13	+	1044	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	72.3972375163583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221621	34258057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221753_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.7	chr13	+	6788	5	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	2	-4	intron_retention	FALSE	canonical	3	167	junction_1	26.5235744197497	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGTAGTGTTCCTG	NA	False	NA	8	True	AATAAA	-10	NA	34221623	34258050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221753_34228406_34234418_34244416_34244549_34247892_34248017_34257658
ES.8963.8	chr13	+	1834	4	NIC	ENSMUSG00000038286.12	novel	2009	5	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	73.3136337176714	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACATGAGACAGCTCTCC	NA	False	NA	NA	False	AATAAA	-13	NA	34221627	34245867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_34221753_34228406_34228511_34234263_34234418_34244416
ES.8963.9	chr13	+	5481	5	FSM	ENSMUSG00000038286.12	ENSMUST00000221124.2	2009	5	10	-3482	-8	1335	multi-exon	FALSE	canonical	3	157	junction_3	18.4932420089069	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATAGTTTCTGAGAGTG	NA	False	NA	NA	False	NA	NA	NA	34221631	34249351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416
ES.8964.1	chr13	-	5836	2	Antisense	novelGene_ENSMUSG00000038286.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCACAAAGCAACTAAG	7885	False	NA	NA	False	NA	NA	NA	34239065	34232852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_34238514_34238890
ES.8965.1	chr13	-	1638	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	-29	1	-29	-1	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCCTTTTCTCTTCAAC	NA	False	NA	NA	False	AATAAA	-21	NA	34262019	34258257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ES.8965.2	chr13	-	3081	2	ISM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	0	4	0	-4	intron_retention	FALSE	canonical	3	332	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGTCCTTTTCTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	34261990	34258260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34259512_34260160
ES.8965.3	chr13	-	1634	4	NNC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	145.080054529292	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTATGGTCCTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34261990	34258264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34259512_34260160_34260272_34260531_34260641_34261823
ES.8965.4	chr13	-	1860	3	NIC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	2	-8	intron_retention	FALSE	canonical	3	327	junction_2	2.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTATGGTCCTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34261988	34258264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34259512_34260160_34260641_34261855
ES.8965.5	chr13	-	2890	1	NIC	ENSMUSG00000058672.8	novel	1610	4	NA	NA	836	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTATGGTCCTTTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	34261154	34258264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34258300_34261200
ES.8966.1	chr13	+	4199	2	Antisense	novelGene_ENSMUSG00000113591.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAGGAAGGAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34286915	34292170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_34286936_34287991
ES.8967.1	chr13	+	689	1	Intergenic	novelGene_7327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34300994	34301683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_34301000_34301700
ES.8968.1	chr13	+	4077	1	Genic_Genomic	ENSMUSG00000113883.2	novel	NA	NA	NA	NA	-3286	-3004	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCTAACCCCTCTGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	34314556	34318633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_34314600_34318600
ES.8969.1	chr13	-	3524	4	NNC	ENSMUSG00000113591.2	novel	1033	5	NA	NA	16273	2656	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	0.471404520791032	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGCTATTTTTATGT	NA	False	NA	NA	False	AATAAA	-33	NA	34280982	34265481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34268638_34272903_34273013_34279212_34279439_34280949
ES.8969.10	chr13	-	5110	1	Genic_Genomic	ENSMUSG00000045136.7	novel	NA	NA	NA	NA	3154	4657	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGATTATGTTCCAAATC	NA	False	NA	NA	False	AATATA	-13	NA	34311183	34306073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34306100_34311200
ES.8969.11	chr13	-	5249	2	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	2872	4557	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAGGAAGTGATCATG	NA	False	NA	NA	False	NA	NA	NA	34311465	34306173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315
ES.8969.12	chr13	-	5620	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	10	3491	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	34314327	34307239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.13	chr13	-	5673	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-2	-3489	-2	3489	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTTGTTTGTTTGTTT	NA	False	NA	-4	True	ATTAAA	-15	NA	34314339	34307241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.17	chr13	-	4924	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	10	2795	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCTTTAGGAAATTAG	NA	False	NA	NA	False	NA	NA	NA	34314327	34307935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.18	chr13	-	3589	2	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	2275	2300	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	0	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGAGTTCAGGTGCTG	NA	False	NA	NA	False	CATAAA	-11	NA	34312062	34308430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315
ES.8969.19	chr13	-	3026	2	ISM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	1450	-1209	1450	1209	3prime_fragment	FALSE	canonical	3	496	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGTTTCCTTTGT	NA	False	NA	NA	False	NA	NA	NA	34312887	34309521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34312515_34312854
ES.8969.2	chr13	-	3516	1	Genic_Genomic	ENSMUSG00000114067.2	novel	NA	NA	NA	NA	775	2400	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34272235	34268719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34268700_34272200
ES.8969.20	chr13	-	3252	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	68	1183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	208.621667139346	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGATTAAGAGATACT	NA	False	NA	NA	False	NA	NA	NA	34314269	34309547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310271_34310315_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.21	chr13	-	2394	1	Genic_Genomic	ENSMUSG00000045136.7	novel	NA	NA	NA	NA	1828	615	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCAGCTCTAGGCGCC	NA	False	NA	NA	False	NA	NA	NA	34312509	34310115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34310100_34312500
ES.8969.22	chr13	-	2742	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	12	615	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCCAGCTCTAGGCGCC	NA	False	NA	NA	False	NA	NA	NA	34314325	34310115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.23	chr13	-	2402	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	10	-230	10	230	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAGAAAAAAAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	34314327	34310500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.24	chr13	-	1923	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	259	0	-259	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTACACGACTTGTTT	NA	False	NA	-12	True	AAGAAA	-20	NA	34314337	34310989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.28	chr13	-	1900	6	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	-1007	-475	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	235.944400230224	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTGTCCTCTTTTCTTT	NA	False	NA	-2	True	CATAAA	-13	NA	34315456	34311205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159_34314326_34314778_34314926_34315398
ES.8969.29	chr13	-	1816	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	-111	477	1	-477	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACGGTGTCCTCTTTTCT	NA	False	NA	-4	True	CATAAA	-11	NA	34314448	34311207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.3	chr13	-	2980	5	Fusion	ENSMUSG00000045136.7_ENSMUSG00000113591.2	novel	2182	4	NA	NA	10	-9788	multi-exon	FALSE	canonical	1	1	junction_1	208.18906671581	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATTTTATGTGTAT	NA	False	NA	NA	False	ATTAAA	-10	NA	34314327	34277925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_34279439_34311435_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.4	chr13	-	6217	2	Genic_Genomic	ENSMUSG00000113591.2	novel	1033	5	NA	NA	6201	-15644	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGCGTGC	NA	False	NA	NA	False	AATAAA	-13	NA	34291054	34283781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34286936_34287991
ES.8969.5	chr13	-	2543	1	Intergenic	novelGene_7325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACATTATATTGTCATAA	NA	False	NA	NA	False	AATAAA	-17	NA	34294246	34291703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_34291700_34294200
ES.8969.6	chr13	-	6427	1	Genic_Genomic	ENSMUSG00000113591.2	novel	NA	NA	NA	NA	-1408	-24099	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACATTTATTATTTCCT	NA	False	NA	NA	False	AATAAA	-14	NA	34298663	34292236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_34292200_34298700
ES.8969.7	chr13	-	2628	1	Intergenic	novelGene_7326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTTGGTCTTGGGGTG	NA	False	NA	-3	True	NA	NA	NA	34300009	34297381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_34297400_34300000
ES.8969.8	chr13	-	8017	5	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	159	6037	at_least_one_novel_splicesite	FALSE	non_canonical	2	10	junction_1	204.295741512152	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGGTCAAAGTCTCCAA	NA	False	NA	NA	False	NA	NA	NA	34314178	34304693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310273_34310315_34312515_34312854_34312966_34313228_34313338_34314159
ES.8969.9	chr13	-	5965	2	NNC	ENSMUSG00000045136.7	novel	2182	4	NA	NA	2879	5279	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAAAAAGGGATCACAG	NA	False	NA	NA	False	AGTAAA	-21	NA	34311458	34305451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34310262_34310303
ES.897.1	chr1	+	368	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	7219	False	NA	NA	False	NA	NA	NA	85839161	85839529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_85839200_85839500
ES.8970.1	chr13	+	570	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	-5	-10	-5	10	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGTTTTAAAAGGGTTC	NA	False	NA	32	True	AATAAA	-32	NA	34346941	34362166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34347233_34350043_34350120_34361963
ES.8970.2	chr13	+	475	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	2	-3	2	-2	multi-exon	FALSE	canonical	3	173	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCATTTTACTTTGTT	NA	False	NA	20	True	AATAAA	-20	NA	34346948	34362154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_34347233_34361963
ES.8970.3	chr13	+	3862	5	NNC	ENSMUSG00000071451.11	novel	555	3	NA	NA	58	4564	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	533.46532220942	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCAGAGGGTTATTTCC	NA	False	NA	NA	False	AATAAA	-28	NA	34347004	34366720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_34347233_34350043_34350120_34361963_34363598_34363679_34363839_34364955
ES.8971.1	chr13	-	2058	1	Antisense	novelGene_ENSMUSG00000071451.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGACTATTTGCCCAT	8184	False	NA	NA	False	ATTAAA	-17	NA	34347225	34345167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_34345200_34347200
ES.8972.1	chr13	-	2975	2	Antisense	novelGene_ENSMUSG00000071451.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34359848	34349636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_34350752_34357988
ES.8973.1	chr13	-	6366	10	FSM	ENSMUSG00000038267.16	ENSMUST00000148390.3	5496	10	-881	11	-150	-11	multi-exon	FALSE	canonical	3	13	junction_3	4.97648792812415	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCTCTCCATAGCTGAT	NA	False	NA	3	True	AATAAA	-15	NA	34529315	34363151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
ES.8973.2	chr13	-	5489	9	NIC	ENSMUSG00000038267.16	novel	6251	11	NA	NA	36	-11	combination_of_known_junctions	FALSE	canonical	2	3	junction_8	7.27044530960793	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCTCTCCATAGCTGAT	NA	False	NA	3	True	AATAAA	-15	NA	34528542	34363151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34528141
ES.8973.3	chr13	-	6114	11	NNC	ENSMUSG00000038267.16	novel	6251	11	NA	NA	-86	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	7.66093989011792	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTTCTCTCCATAGCT	NA	False	NA	0	True	AATAAA	-12	NA	34529251	34363154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141_34528837_34529021
ES.8973.4	chr13	-	5833	10	FSM	ENSMUSG00000038267.16	ENSMUST00000148390.3	5496	10	-819	482	-88	-482	multi-exon	FALSE	canonical	3	13	junction_3	4.97648792812415	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTCTGGAATGTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	34529253	34363622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
ES.8973.5	chr13	-	4658	8	NNC	ENSMUSG00000038267.16	novel	5496	10	NA	NA	-42049	-485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.36660026534076	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTCCTCTGGAATGTC	NA	False	NA	NA	False	AATAAA	-17	NA	34419563	34363625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34419364
ES.8973.6	chr13	-	5615	11	NNC	ENSMUSG00000038267.16	novel	6251	11	NA	NA	-64	-487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	7.66093989011792	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTCCTCTGGAATG	NA	False	NA	NA	False	AATAAA	-15	NA	34529229	34363627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141_34528833_34529021
ES.8973.7	chr13	-	1940	4	ISM	ENSMUSG00000038267.16	ENSMUST00000040336.12	6251	11	285	41972	285	240	5prime_fragment	FALSE	canonical	3	14	junction_3	4.78423336480244	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTCATATATTCATAAAT	NA	False	NA	NA	False	NA	NA	NA	34528880	34405112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_34406055_34482979_34483135_34489140_34489245_34528141
ES.8974.1	chr13	+	158	1	Intergenic	novelGene_7328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	34716313	34716471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_34716300_34716500
ES.8975.1	chr13	-	2289	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	388	7	388	0	multi-exon	FALSE	canonical	2	3	junction_4	2.06155281280883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGAGAGGATGTTTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	34837081	34811823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
ES.8975.2	chr13	-	1949	6	FSM	ENSMUSG00000021411.17	ENSMUST00000021847.15	2027	6	70	8	70	-7	multi-exon	FALSE	canonical	0	0	junction_2	2.78567765543682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGATCTAGAGAGGAT	NA	False	NA	NA	False	AATAAA	-13	NA	34836594	34811830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_34812872_34814333_34814446_34821136_34821291_34822147_34822266_34822989_34823082_34836162
ES.8975.3	chr13	-	153	1	Intergenic	novelGene_7329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAAATAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	34824992	34824839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_34824800_34825000
ES.8976.1	chr13	+	182	1	Intergenic	novelGene_7330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTGCCAATGTTA	122	False	NA	NA	False	NA	NA	NA	34924568	34924750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_34924600_34924800
ES.8977.1	chr13	+	4373	16	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	46	201	intron_retention	FALSE	canonical	0	0	junction_15	49.1819298342615	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTAGCCATTTTTAAA	NA	False	NA	11	True	AATAAA	-18	NA	35059330	35086859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086092_35086328
ES.8977.10	chr13	+	4077	19	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-7	0	intron_retention	FALSE	canonical	3	35	junction_16	53.2687108493866	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059479	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.11	chr13	+	5793	17	NNC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	-7	0	intron_retention	FALSE	canonical	1	2	junction_6	67.9581385394715	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059479	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076045_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.12	chr13	+	5186	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	9	junction_7	64.4383238287176	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTACTGGCATTTTCT	NA	False	NA	15	True	AATAAA	-20	NA	35059486	35090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35088026_35088073_35089865
ES.8977.13	chr13	+	5849	16	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_15	30.2599111403557	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059486	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35088073_35089865
ES.8977.14	chr13	+	3665	21	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_16	72.0363796980387	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCGTCTACTGGCATTT	NA	False	NA	12	True	AATAAA	-17	NA	35059486	35090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085472_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.15	chr13	+	5151	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	0	-1	intron_retention	FALSE	canonical	2	18	junction_16	56.3018311760073	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059486	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.16	chr13	+	4081	19	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_16	57.9828891320428	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059488	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087156_35087257_35088026_35088073_35089865
ES.8977.17	chr13	+	5057	14	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	3	200	intron_retention	FALSE	canonical	3	139	junction_7	22.0104870110032	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAGCCATTTTTAA	NA	False	NA	10	True	AATAAA	-17	NA	35059489	35086858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375
ES.8977.18	chr13	+	5156	15	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	4	194	intron_retention	FALSE	canonical	3	9	junction_7	61.4777626961363	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCATTTGTAGCCAT	NA	False	NA	4	True	AATAAA	-11	NA	35059490	35086852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375
ES.8977.19	chr13	+	7506	17	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_16	69.5588498593098	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059490	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086092_35086328
ES.8977.2	chr13	+	4484	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	175	3185	-27	204	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAGCCATTTTTAAAAGA	NA	False	NA	14	True	AATAAA	-21	NA	35059459	35086862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.20	chr13	+	4507	19	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	5	-4	intron_retention	FALSE	canonical	3	12	junction_15	56.8443836330141	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACCGTCTACTGGCAT	NA	False	NA	10	True	AATAAA	-15	NA	35059491	35090043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35088073_35089865
ES.8977.21	chr13	+	5246	19	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	12	0	intron_retention	FALSE	canonical	2	9	junction_7	70.5286037761792	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059498	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.22	chr13	+	5060	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	17	-2	intron_retention	FALSE	canonical	3	40	junction_15	43.5781894271664	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCGTCTACTGGCATTT	NA	False	NA	12	True	AATAAA	-17	NA	35059503	35090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35088026_35088073_35089865
ES.8977.23	chr13	+	3209	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	223	4412	21	-1023	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGCAGTTTATTATTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	35059507	35085635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.24	chr13	+	3796	21	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	22	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	66.4404056279009	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059508	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.25	chr13	+	7532	16	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	22	2	intron_retention	FALSE	canonical	2	18	junction_15	57.0331677379244	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTACTGGCATTTTCTT	NA	False	NA	16	True	AATAAA	-21	NA	35059508	35090049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35087257_35087512_35087586_35088026
ES.8977.26	chr13	+	5008	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	249	intron_retention	FALSE	canonical	3	9	junction_7	64.6722204176569	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTAGTGTGTGTCTGA	NA	False	NA	NA	False	CATAAA	-15	NA	35059511	35088102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35088026
ES.8977.27	chr13	+	4568	16	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	199	intron_retention	FALSE	canonical	2	5	junction_12	62.1181669615795	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTAGCCATTTTTA	NA	False	NA	9	True	AATAAA	-16	NA	35059511	35086857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375
ES.8977.28	chr13	+	6519	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	1	intron_retention	FALSE	canonical	2	18	junction_17	62.7384310183447	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTACTGGCATTTTCT	NA	False	NA	15	True	AATAAA	-20	NA	35059511	35090048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35087586_35088026
ES.8977.29	chr13	+	4559	19	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	27	junction_17	54.8646201409422	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059511	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35088073_35089865
ES.8977.3	chr13	+	3485	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	185	4174	-17	-785	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCAGTGCTGGGTGG	NA	False	NA	NA	False	CATAAA	-19	NA	35059469	35085873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.30	chr13	+	7061	17	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	-3	intron_retention	FALSE	canonical	1	1	junction_16	58.3159162986401	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCGTCTACTGGCATT	NA	False	NA	11	True	AATAAA	-16	NA	35059511	35090044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35087730_35088026
ES.8977.31	chr13	+	4802	19	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	-1	intron_retention	FALSE	canonical	2	12	junction_15	63.8333091577171	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059511	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.32	chr13	+	6989	17	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	2	intron_retention	FALSE	canonical	0	0	junction_4	74.4125955400025	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCTACTGGCATTTTCTT	NA	False	NA	16	True	AATAAA	-21	NA	35059511	35090049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073460_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35088026
ES.8977.33	chr13	+	4232	19	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	25	0	intron_retention	FALSE	canonical	3	12	junction_15	56.2824940439074	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059511	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35087257_35088026_35088073_35089865
ES.8977.34	chr13	+	3931	16	FSM	ENSMUSG00000021413.10	ENSMUST00000222509.2	3648	16	-82	-201	25	201	multi-exon	FALSE	canonical	3	86	junction_15	31.0010752501694	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTAGCCATTTTTAAA	NA	False	NA	11	True	AATAAA	-18	NA	35059511	35086859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612
ES.8977.35	chr13	+	4555	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	0	intron_retention	FALSE	canonical	3	40	junction_16	46.1771075265176	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059512	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35088026_35088073_35089865
ES.8977.36	chr13	+	4650	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	-1	intron_retention	FALSE	canonical	3	35	junction_15	54.3441551340329	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059512	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.38	chr13	+	5670	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	-3	intron_retention	FALSE	canonical	3	9	junction_7	65.7875368135941	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCGTCTACTGGCATT	NA	False	NA	11	True	AATAAA	-16	NA	35059512	35090044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35088073_35089865
ES.8977.39	chr13	+	7788	15	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	26	0	intron_retention	FALSE	canonical	3	40	junction_14	40.7285689231848	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059512	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35087257_35088026
ES.8977.4	chr13	+	5233	17	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-16	-1	intron_retention	FALSE	canonical	0	0	junction_12	58.7515624792226	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059470	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083346_35083813_35083966_35084346_35084434_35085375_35087257_35088026_35088073_35089865
ES.8977.40	chr13	+	3858	20	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	68.6678141348692	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059512	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072402_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.41	chr13	+	3787	16	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	26	-203	intron_retention	FALSE	canonical	0	0	junction_15	49.1819298342615	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTCTGAAAGTCCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	35059512	35086455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086092_35086328
ES.8977.42	chr13	+	3861	21	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_12	71.6256064546752	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059512	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.43	chr13	+	4437	15	NNC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	26	200	intron_retention	FALSE	non_canonical	0	0	junction_8	49.5164886988286	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAGCCATTTTTAA	NA	False	NA	10	True	AATAAA	-17	NA	35059512	35086858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078407_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.44	chr13	+	5366	14	ISM	ENSMUSG00000021413.10	ENSMUST00000222509.2	3648	16	-79	-199	28	199	intron_retention	FALSE	canonical	3	139	junction_7	20.9341034293454	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTAGCCATTTTTA	NA	False	NA	9	True	AATAAA	-16	NA	35059514	35086857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346
ES.8977.45	chr13	+	7614	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	230	0	28	0	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059514	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.46	chr13	+	3533	20	NNC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_15	61.888023266402	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059514	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085472_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.47	chr13	+	4655	15	NIC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	30	200	intron_retention	FALSE	canonical	3	8	junction_12	48.8805812617833	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAGCCATTTTTAA	NA	False	NA	10	True	AATAAA	-17	NA	35059516	35086858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083439_35083813_35083966_35084346_35084434_35085375
ES.8977.48	chr13	+	4178	20	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	33	0	intron_retention	FALSE	canonical	2	5	junction_12	68.0210575184478	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059519	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.49	chr13	+	4616	19	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	33	-5	intron_retention	FALSE	canonical	2	18	junction_17	56.9863531421729	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATACCGTCTACTGGCA	NA	False	NA	9	True	AATAAA	-14	NA	35059519	35090042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.5	chr13	+	7395	16	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	27	junction_15	43.1516189988536	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059476	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512
ES.8977.50	chr13	+	7021	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	33	0	intron_retention	FALSE	canonical	2	18	junction_16	57.9168315345375	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059519	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35087512_35087586_35088026
ES.8977.51	chr13	+	4134	20	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	37	-5	intron_retention	FALSE	canonical	3	9	junction_7	67.2116597192486	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATACCGTCTACTGGCA	NA	False	NA	9	True	AATAAA	-14	NA	35059523	35090042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.52	chr13	+	4399	15	NNC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	38	194	intron_retention	FALSE	non_canonical	0	0	junction_5	50.8976564153147	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCATTTGTAGCCAT	NA	False	NA	4	True	AATAAA	-11	NA	35059524	35086852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074487_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.53	chr13	+	4135	20	NNC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	38	-1	intron_retention	FALSE	canonical	0	0	junction_12	68.5365017896473	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059524	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083334_35083439_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.54	chr13	+	6329	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	45	0	intron_retention	FALSE	canonical	3	40	junction_16	44.0166428041712	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059531	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35088026
ES.8977.55	chr13	+	5547	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	45	-1	intron_retention	FALSE	canonical	3	27	junction_15	45.9563311742789	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059531	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35087257_35087512_35088073_35089865
ES.8977.57	chr13	+	4297	21	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	52	-1	intron_retention	FALSE	canonical	0	0	junction_19	73.1014876729605	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059538	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35087687_35088026_35088073_35089865
ES.8977.59	chr13	+	4250	21	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-41	-1	intron_retention	FALSE	canonical	2	5	junction_13	75.7076449244064	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059552	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.6	chr13	+	3753	20	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-10	-3	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	60.6976065918861	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCGTCTACTGGCATT	NA	False	NA	11	True	AATAAA	-16	NA	35059476	35090044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
ES.8977.61	chr13	+	4556	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	37	200	intron_retention	FALSE	canonical	2	5	junction_13	76.3518786605805	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAGCCATTTTTAA	NA	False	NA	10	True	AATAAA	-17	NA	35059630	35086858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375
ES.8977.62	chr13	+	3947	19	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-4966	-1	intron_retention	FALSE	canonical	2	18	junction_17	62.2656842257336	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35067217	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.63	chr13	+	6377	16	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-4651	-1	intron_retention	FALSE	canonical	3	27	junction_15	47.5869263091824	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35067532	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35087512
ES.8977.64	chr13	+	5777	16	NNC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-4580	-1	intron_retention	FALSE	canonical	0	0	junction_14	58.2050016942034	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35067603	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086659_35087171_35087257_35088026
ES.8977.66	chr13	+	4259	19	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-4080	-2	intron_retention	FALSE	canonical	2	5	junction_12	76.5393669385763	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCGTCTACTGGCATTT	NA	False	NA	12	True	AATAAA	-17	NA	35068103	35090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35087257_35087512_35088073_35089865
ES.8977.67	chr13	+	3393	18	NNC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-3910	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	66.5430110405225	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35068273	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086659_35087165_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.68	chr13	+	3496	20	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-3830	-4	intron_retention	FALSE	canonical	2	5	junction_12	77.157787032308	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACCGTCTACTGGCAT	NA	False	NA	10	True	AATAAA	-15	NA	35068353	35090043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083297_35083439_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35088073_35089865
ES.8977.7	chr13	+	5757	17	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-10	-1	intron_retention	FALSE	canonical	0	0	junction_11	63.9904472851222	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059476	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026
ES.8977.70	chr13	+	4363	16	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-1419	0	intron_retention	FALSE	canonical	3	35	junction_14	55.2929973464593	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35070764	35090047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026
ES.8977.71	chr13	+	4357	17	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	43	-3	intron_retention	FALSE	canonical	2	9	junction_4	77.58722410133	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATACCGTCTACTGGCATT	NA	False	NA	11	True	AATAAA	-16	NA	35072226	35090044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35087512_35087586_35088026
ES.8977.72	chr13	+	5667	6	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	3196	-1	intron_retention	FALSE	canonical	3	27	junction_5	68.8697321034429	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35079302	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35079440_35079949_35080104_35083091_35083966_35084346_35084434_35085375_35087257_35087512
ES.8977.73	chr13	+	1403	8	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	-1693	-1	intron_retention	FALSE	canonical	3	12	junction_3	69.4708865758359	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35083938	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35087512_35088073_35089865
ES.8977.74	chr13	+	3236	5	NIC	ENSMUSG00000021413.10	novel	419	4	NA	NA	-1693	-2	intron_retention	FALSE	canonical	2	18	junction_3	64.3136843914264	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCGTCTACTGGCATTT	NA	False	NA	12	True	AATAAA	-17	NA	35083938	35090045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35083966_35084346_35087257_35087512_35087586_35088026_35088073_35089865
ES.8977.75	chr13	+	4523	3	NNC	ENSMUSG00000021413.10	novel	7844	15	NA	NA	-1287	-1	intron_retention	FALSE	canonical	0	0	junction_2	101.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35084344	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35084434_35085375_35086092_35086328
ES.8977.8	chr13	+	4568	16	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-9	200	intron_retention	FALSE	canonical	3	9	junction_7	59.6852485032013	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAGCCATTTTTAA	NA	False	NA	10	True	AATAAA	-17	NA	35059477	35086858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ES.8977.9	chr13	+	4544	18	NIC	ENSMUSG00000021413.10	novel	3648	16	NA	NA	-7	-1	intron_retention	FALSE	canonical	1	2	junction_15	58.6766401294912	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCGTCTACTGGCATTTT	NA	False	NA	13	True	AATAAA	-18	NA	35059479	35090046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35087169_35087257_35087512_35088073_35089865
ES.8978.1	chr13	+	178	1	Intergenic	novelGene_7331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCTATTCCCTAC	NA	False	NA	NA	False	NA	NA	NA	35097001	35097179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_35097000_35097200
ES.8979.1	chr13	-	2871	5	NNC	ENSMUSG00000021414.9	novel	1811	7	NA	NA	-196	0	intron_retention	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTCTGTTGTAGTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	35101168	35093946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35095177_35096423_35096512_35097411_35097483_35097592_35098640_35100733
ES.898.1	chr1	+	3525	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	-261	-152	-29	152	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATTTGTTTTTCTTGTT	NA	False	NA	33	True	AATAAA	-33	NA	85992079	86067025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.10	chr1	+	1490	6	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	10	60977	10	2355	5prime_fragment	FALSE	canonical	3	1487	junction_4	71.3481604528105	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGTCACACT	NA	False	NA	NA	False	NA	NA	NA	85992350	86005896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077
ES.898.11	chr1	+	3840	19	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11	11131	-11	-4729	5prime_fragment	FALSE	canonical	3	1352	junction_6	91.4157002210976	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	85992351	86055742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177
ES.898.12	chr1	+	3196	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-9	136	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_13	321.698573547074	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCAGACTTTAGTTG	NA	False	NA	17	True	AATAAA	-17	NA	85992353	86067009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017754_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.16	chr1	+	3529	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	22	-439	0	439	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCACTCATCTTGTC	NA	False	NA	NA	False	AATAAA	-24	NA	85992362	86067312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.17	chr1	+	4267	21	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	5	11	intron_retention	FALSE	canonical	3	1352	junction_6	90.2416062578676	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	85992367	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86056028_86058358_86058452_86060435
ES.898.18	chr1	+	5271	5	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	9	2355	intron_retention	FALSE	canonical	3	1527	junction_2	63.5703350628263	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGTCACACT	NA	False	NA	NA	False	NA	NA	NA	85992371	86005896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_86003727_86005077
ES.898.21	chr1	+	5042	24	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	14	146	intron_retention	FALSE	canonical	3	1352	junction_6	100.096324118718	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTTGATTTGTTTTT	NA	False	NA	27	True	AATAAA	-27	NA	85992376	86067019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.22	chr1	+	3241	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	14	135	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_18	320.016394979313	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	85992376	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046379_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.23	chr1	+	3203	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	15	135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	437.181787052658	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	85992377	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006298_86006517_86009758_86009820_86010866_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.25	chr1	+	3173	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	16	140	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	435.554481778367	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGACTTTAGTTGATTT	NA	False	NA	21	True	AATAAA	-21	NA	85992378	86067013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003565_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060527_86061359_86061507_86064684_86064839_86066801
ES.898.26	chr1	+	4814	18	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	16	-22736	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	494.321393567392	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATACTTTGAGGAAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	85992378	86037735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86034325_86034571_86035182
ES.898.27	chr1	+	2739	23	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	39	5475	17	876	5prime_fragment	FALSE	canonical	3	1352	junction_6	89.6121578971024	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCTGAACCAAACTTCCA	NA	False	NA	36	True	NA	NA	NA	85992379	86061398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359
ES.898.3	chr1	+	2732	22	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	-15	6373	-15	11	5prime_fragment	FALSE	canonical	3	1352	junction_6	88.9904323630029	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	85992325	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435
ES.898.30	chr1	+	3183	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	20	126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	322.195937625263	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTCCACATTGACCAG	NA	False	NA	7	True	AATAAA	-7	NA	85992382	86066999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060520_86061369_86061507_86064684_86064839_86066801
ES.898.31	chr1	+	3209	1	FSM	ENSMUSG00000026229.18	ENSMUST00000189234.2	3022	1	22	-209	22	209	mono-exon	FALSE	NA	NA	NA	NA	NA	1085	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAAAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	85992384	85995593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_85992400_85995600
ES.898.33	chr1	+	2616	22	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	22	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	331.825631067141	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	85992384	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005134_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435
ES.898.35	chr1	+	2624	22	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	24	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	453.345858170317	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	85992386	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046250_86046339_86054195_86054281_86055857_86056028_86058358_86058452_86060435
ES.898.36	chr1	+	3191	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	25	135	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_13	321.698573547074	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	85992387	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017724_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.37	chr1	+	3896	20	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	25	-4704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	470.369531161273	1208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTACTTCCCTAGT	NA	False	NA	NA	False	AATAAA	-5	NA	85992387	86055767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86014915_86014983_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177
ES.898.38	chr1	+	3186	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	25	145	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	323.469899745968	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTAGTTGATTTGTTTT	NA	False	NA	26	True	AATAAA	-26	NA	85992387	86067018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009796_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.39	chr1	+	3166	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-24	139	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	323.593097972679	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGACTTTAGTTGATT	NA	False	NA	20	True	AATAAA	-20	NA	85992389	86067012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010962_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.4	chr1	+	2982	23	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-9	134	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	336.640647604883	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGACCAGACTTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	85992331	86067007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.40	chr1	+	3191	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-23	134	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	323.507298560979	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGACCAGACTTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	85992390	86067007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022079_86044317_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.41	chr1	+	3185	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-23	132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	323.570743488447	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACATTGACCAGACTTTA	NA	False	NA	13	True	AATAAA	-13	NA	85992390	86067005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056019_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.42	chr1	+	3201	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-19	134	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	320.587002296828	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGACCAGACTTTAGT	NA	False	NA	15	True	AATAAA	-15	NA	85992394	86067007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064675_86064839_86066801
ES.898.43	chr1	+	3197	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-19	146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	323.469899745968	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTTGATTTGTTTTT	NA	False	NA	27	True	AATAAA	-27	NA	85992394	86067019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010875_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.44	chr1	+	3119	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-2	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	321.644461668816	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	85992411	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005134_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.45	chr1	+	2502	22	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-2	11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	333.937635901079	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	85992411	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006433_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435
ES.898.46	chr1	+	4754	24	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	6	144	intron_retention	FALSE	canonical	3	1352	junction_6	104.16828757403	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTAGTTGATTTGTTT	NA	False	NA	25	True	AATAAA	-25	NA	85992419	86067017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.48	chr1	+	3137	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	9	132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	321.644461668816	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACATTGACCAGACTTTA	NA	False	NA	13	True	AATAAA	-13	NA	85992422	86067005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003731_86005106_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.49	chr1	+	3139	24	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	15	146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	327.615357250295	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGTTGATTTGTTTTT	NA	False	NA	27	True	AATAAA	-27	NA	85992428	86067019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992532_85999326_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.50	chr1	+	4783	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	75	148	intron_retention	FALSE	canonical	1	1	junction_18	434.713361420169	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGATTTGTTTTTCT	NA	False	NA	29	True	AATAAA	-29	NA	85992488	86067021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86053412_86053507_86054177_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.51	chr1	+	3065	24	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	5963	-139	5711	139	3prime_fragment	FALSE	canonical	3	1352	junction_5	100.356604242685	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGACTTTAGTTGATT	NA	False	NA	20	True	AATAAA	-20	NA	85998303	86067012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.52	chr1	+	7008	1	NIC	ENSMUSG00000026229.18	novel	2518	21	NA	NA	6296	2355	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGTCACACT	NA	False	NA	NA	False	NA	NA	NA	85998888	86005896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_85998900_86005900
ES.898.53	chr1	+	2782	21	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11176	-141	10924	141	3prime_fragment	FALSE	canonical	3	1352	junction_2	107.175556914812	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGACTTTAGTTGATTTG	NA	False	NA	22	True	AATAAA	-22	NA	86003516	86067014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.55	chr1	+	4274	15	NNC	ENSMUSG00000026229.18	novel	2518	21	NA	NA	10985	-4704	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	395.408397761616	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGCTACTTCCCTAGT	NA	False	NA	NA	False	AATAAA	-5	NA	86003577	86055767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86017449_86017591_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177
ES.898.56	chr1	+	1668	15	ISM	ENSMUSG00000026229.18	ENSMUST00000139715.8	2518	21	17415	-29	17163	11	3prime_fragment	FALSE	canonical	3	1354	junction_4	82.6353250055659	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGAGGAGAAGATGGAAG	NA	False	NA	59	True	NA	NA	NA	86009755	86060500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435
ES.898.57	chr1	+	3604	11	ISM	ENSMUSG00000026229.18	ENSMUST00000139715.8	2518	21	17458	11713	17206	-11713	internal_fragment	FALSE	canonical	3	1354	junction_4	82.879671814022	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTATGGTGGTGCCTGCT	NA	False	NA	NA	False	AATAAA	-19	NA	86009798	86048758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231
ES.898.58	chr1	+	2010	16	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	20562	-139	20310	139	3prime_fragment	FALSE	canonical	3	1354	junction_2	109.732320772971	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGACTTTAGTTGATT	NA	False	NA	20	True	AATAAA	-20	NA	86012902	86067012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.6	chr1	+	3250	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	4	136	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	323.595587372057	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCAGACTTTAGTTG	NA	False	NA	17	True	AATAAA	-17	NA	85992344	86067009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016649_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.61	chr1	+	1300	11	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	-18777	132	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	481.170198578424	1215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACATTGACCAGACTTTA	1685	False	NA	13	True	AATAAA	-13	NA	86019761	86067005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064698_86064839_86066801
ES.898.62	chr1	+	4244	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	62106	-147	-1142	147	intron_retention	FALSE	canonical	3	1493	junction_1	69.4671685042654	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTTGATTTGTTTTTC	574	False	NA	28	True	AATAAA	-28	NA	86054446	86067020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684
ES.898.63	chr1	+	2610	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	64096	-135	848	135	3prime_fragment	FALSE	canonical	3	1618	junction_2	54.2004381901106	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	2564	False	NA	16	True	AATAAA	-16	NA	86056436	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.8	chr1	+	3262	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	9	135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	323.570743488447	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGACCAGACTTTAGTT	NA	False	NA	16	True	AATAAA	-16	NA	85992349	86067008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058334_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.898.9	chr1	+	3229	25	NNC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	10	141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	322.633779315737	1220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGACTTTAGTTGATTTG	NA	False	NA	22	True	AATAAA	-22	NA	85992350	86067014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013817_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ES.8980.1	chr13	-	248	1	Intergenic	novelGene_7332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGCCAGAGATTAACAAT	NA	False	NA	NA	False	NA	NA	NA	35127823	35127575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_35127600_35127800
ES.8981.1	chr13	-	1402	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	7	-14	-2	5	multi-exon	TRUE	canonical	3	29	junction_9	51.0630208542878	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTCATGTTGGGTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	35178108	35161725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ES.8981.10	chr13	-	3369	9	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	45	0	intron_retention	FALSE	canonical	3	47	junction_8	47.5939859646153	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178060	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35174353_35174700_35174800_35177050_35177214_35177812
ES.8981.11	chr13	-	2887	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	45	0	intron_retention	FALSE	canonical	2	6	junction_6	67.9227956789141	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178060	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ES.8981.12	chr13	-	1679	11	NNC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	75.341157410807	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178103	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35173402_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ES.8981.13	chr13	-	3239	9	NIC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	71	junction_8	40.0085928270415	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178114	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35174353_35174700_35174800_35177050_35177214_35177996
ES.8981.14	chr13	-	1567	10	NIC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	52.8942574306115	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178096	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
ES.8981.15	chr13	-	1724	11	NNC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	87.1662778831355	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178054	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170167_35171451_35171552_35172265_35172336_35173402_35173682_35174163_35174353_35174700_35174800_35177050_35177312_35177996
ES.8981.16	chr13	-	1677	11	NNC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	84.1593726212357	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	952	False	NA	NA	False	AATAAA	-15	NA	35211096	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35173402_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35210991
ES.8981.17	chr13	-	3470	9	NNC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	1	-1	intron_retention	FALSE	canonical	2	6	junction_5	65.6457110175524	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTTAAGAATTCATGT	NA	False	NA	NA	False	AATAAA	-14	NA	35178114	35161733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35173682_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ES.8981.18	chr13	-	1469	9	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	45	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	70.9814016133804	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCCTTAAGAATTCATG	NA	False	NA	NA	False	AATAAA	-13	NA	35178060	35161734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ES.8981.19	chr13	-	1920	11	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	38	2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	82.4953938108062	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGCCTTAAGAATTC	NA	False	NA	NA	False	AATAAA	-10	NA	35178067	35161737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35173402_35173682_35174163_35174353_35174700_35174800_35177050_35177312_35177812
ES.8981.2	chr13	-	2977	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	77.0720362091991	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178114	35161730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35164059_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
ES.8981.20	chr13	-	3031	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	4	2	intron_retention	FALSE	canonical	2	6	junction_6	74.6142342359505	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGCCTTAAGAATTC	NA	False	NA	NA	False	AATAAA	-10	NA	35178111	35161737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35173682_35174163_35174353_35174700_35174800_35177050_35177312_35177812
ES.8981.21	chr13	-	2932	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	-5	2	intron_retention	FALSE	canonical	2	6	junction_6	72.2558895886482	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAGCCTTAAGAATTC	NA	False	NA	NA	False	AATAAA	-10	NA	35178120	35161737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35173682_35174163_35174353_35174700_35174800_35177050_35177204_35177812
ES.8981.22	chr13	-	4677	1	NIC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	-669	338	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35174217	35169540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35169500_35174200
ES.8981.23	chr13	-	1275	7	ISM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	55	7831	45	308	5prime_fragment	FALSE	canonical	3	29	junction_6	60.9245890881141	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	35178060	35169570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ES.8981.24	chr13	-	1743	4	ISM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	174	11418	15	1051	5prime_fragment	FALSE	canonical	3	47	junction_3	66.7149824918578	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAACATACTAAAACTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	35178090	35173149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_35174353_35174700_35174800_35177050_35177214_35177812
ES.8981.3	chr13	-	3943	8	NIC	ENSMUSG00000021417.16	novel	1426	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	71	junction_7	41.04701137546	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178102	35161730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35174353_35174700_35174800_35177050_35177214_35177996
ES.8981.4	chr13	-	4086	8	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	44	0	intron_retention	FALSE	canonical	3	47	junction_7	49.1291509125464	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178061	35161730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35174353_35174700_35174800_35177050_35177214_35177812
ES.8981.5	chr13	-	1670	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_9	56.5674512702303	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAATTCATGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35178090	35161731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177812
ES.8981.6	chr13	-	1403	10	NNC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	59.9452425031831	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAATTCATGTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35178112	35161731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35178003
ES.8981.7	chr13	-	1417	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	7	2	-5	0	multi-exon	FALSE	canonical	3	71	junction_9	38.39206450927	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178120	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ES.8981.8	chr13	-	1488	10	NIC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	51.9781530555072	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178093	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
ES.8981.9	chr13	-	1625	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	120	1	-17	0	multi-exon	FALSE	canonical	3	47	junction_9	45.5959170795038	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178144	35161732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ES.8982.1	chr13	+	524	3	NIC	ENSMUSG00000113738.2	novel	364	5	NA	NA	-36	93	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATCCGACCGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	35236673	35267336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35236787_35263214_35263373_35267083
ES.8983.1	chr13	+	159	1	Intergenic	novelGene_7333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	327	False	NA	NA	False	NA	NA	NA	35871074	35871233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_35871100_35871200
ES.8984.1	chr13	+	3296	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2890	1	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35922405	36058047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.10	chr13	+	3213	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	135	227	135	-227	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAAGTTTATACTCAG	NA	False	NA	NA	False	AATAAA	-24	NA	35925430	36057814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.11	chr13	+	2754	6	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	154	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.78166192682	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGGGAGTGTTTCT	NA	False	NA	13	True	AATAAA	-43	NA	35925449	36058041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35925872_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.13	chr13	+	3199	6	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	171	1	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	108.191681750493	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGAGTGTTTCTCTGCGT	NA	False	NA	19	True	AATAAA	-20	NA	35925466	36058047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36055560_36055705_36056494
ES.8984.14	chr13	+	3067	1	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	193	-71372	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTATTCAGTCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	35925488	35928555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35925500_35928600
ES.8984.15	chr13	+	3140	8	NNC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	337	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.706460373138	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGGAGTGTTTCTCTG	NA	False	NA	16	True	AATAAA	-17	NA	35925632	36058044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494_36057024_36057124
ES.8984.16	chr13	+	3340	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	635	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.8188457320624	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35925930	36058046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35926267_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.17	chr13	+	3765	5	ISM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	74620	0	53121	0	intron_retention	FALSE	canonical	3	213	junction_3	25.6027342289842	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGGGAGTGTTTCT	NA	False	NA	13	True	AATAAA	-43	NA	35999915	36058041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560
ES.8984.18	chr13	+	2457	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90700	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	36037494	36058046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.19	chr13	+	1084	4	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90713	-10313	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	84.3972090112516	337	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTAGCTTGTGTTTTG	NA	False	NA	NA	False	AGTAAA	-24	NA	36037507	36047728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181
ES.8984.2	chr13	+	3214	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2882	2	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGTGTTTCTCTGCGTG	NA	False	NA	20	True	AATAAA	-21	NA	35922413	36058048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.20	chr13	+	1907	3	ISM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	121884	-3	100385	-2	3prime_fragment	FALSE	canonical	3	274	junction_1	3	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGGAGTGTTTCTCTG	NA	False	NA	16	True	AATAAA	-17	NA	36047179	36058044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_36047393_36055560_36055705_36056494
ES.8984.21	chr13	+	7027	2	ISM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	124927	2	103428	-2	3prime_fragment	FALSE	canonical	3	280	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACACATTGGGAGTGTTT	NA	False	NA	11	True	AATAAA	-41	NA	36050222	36058039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_36055705_36056494
ES.8984.3	chr13	+	2985	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2867	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	104.321426370617	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35922428	36058045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36055560_36055705_36056494
ES.8984.4	chr13	+	3460	9	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2856	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	116.078367924433	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGGAGTGTTTCTCTGC	NA	False	NA	17	True	AATAAA	-18	NA	35922439	36058045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36016700_36016901_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.5	chr13	+	3023	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2853	-230	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	356	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGAAGTTTATACT	NA	False	NA	NA	False	AATAAA	-21	NA	35922442	36057811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.6	chr13	+	4273	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2787	0	intron_retention	FALSE	canonical	3	95	junction_1	66.6051049094587	357	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35922508	36058046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_35922622_35999891_36000559_36040645_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.7	chr13	+	3611	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	-29	-7	-29	2	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGTGTTTCTCTGCGTG	NA	False	NA	20	True	AATAAA	-21	NA	35925266	36058048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8984.8	chr13	+	3683	8	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	99.7803710605427	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35925267	36058046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_35925872_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ES.8985.1	chr13	-	2633	1	Antisense	novelGene_ENSMUSG00000059288.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACAAATTCTCCAACACA	NA	False	NA	NA	False	AATAAA	-12	NA	36001227	35998594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_35998600_36001200
ES.8986.1	chr13	-	938	1	Intergenic	novelGene_7334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCCCACAAAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	36018444	36017506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36017500_36018400
ES.8987.1	chr13	+	170	1	Intergenic	novelGene_7335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAGAAAAGAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	36063819	36063989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_36063800_36064000
ES.8988.1	chr13	-	4375	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	8	-3	-7	3	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTGTATTGTCTCA	NA	False	NA	NA	False	NA	NA	NA	36090334	36077451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.10	chr13	-	3964	5	NIC	ENSMUSG00000021418.16	novel	3269	6	NA	NA	5	-1	intron_retention	FALSE	canonical	3	532	junction_3	22.8637267303474	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090337	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36088547_36090186
ES.8988.11	chr13	-	1176	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	194.679537828144	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090328	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082726_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.12	chr13	-	3269	6	NNC	ENSMUSG00000021418.16	novel	1053	7	NA	NA	329	-1	intron_retention	FALSE	canonical	3	12	junction_5	219.287573747351	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36089982	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36088547_36089945
ES.8988.13	chr13	-	1028	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	329	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	192.402639041683	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36089982	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36089945
ES.8988.15	chr13	-	1310	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	199.612277238876	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCTTGCTTGTTTGTT	NA	False	NA	-9	True	CATAAA	-20	NA	36090331	36080689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087494_36087740_36088401_36088547_36090186
ES.8988.16	chr13	-	6259	4	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	0	-3	intron_retention	FALSE	canonical	3	570	junction_3	8.48528137423857	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCTTGCTTGTTTGTT	NA	False	NA	-9	True	CATAAA	-20	NA	36090342	36080689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082547_36082683_36082797_36088547_36090186
ES.8988.17	chr13	-	1702	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	3	-1	intron_retention	FALSE	canonical	3	464	junction_4	46.3381292481928	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTCACACCTTGCTTG	NA	False	NA	-15	True	CATAAA	-14	NA	36090324	36080695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.18	chr13	-	1077	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	195.125914345019	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTATAGAGTCACACC	NA	False	NA	-22	True	CATAAA	-7	NA	36090327	36080702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088507_36090186
ES.8988.2	chr13	-	2527	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	11	1842	-4	1390	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGCAGTGATCACG	NA	False	NA	NA	False	AATAAA	-20	NA	36090331	36079296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.3	chr13	-	1793	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	15	2572	0	660	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCGTCTTTTAAGAACAC	NA	False	NA	NA	False	NA	NA	NA	36090327	36080026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.4	chr13	-	1176	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	-21	3225	-21	7	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGTTGTCATGTTTC	NA	False	NA	1	True	CATAAA	-30	NA	36090363	36080679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.5	chr13	-	5582	5	NIC	ENSMUSG00000021418.16	novel	3269	6	NA	NA	3	0	intron_retention	FALSE	canonical	3	570	junction_4	9.52627944162882	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090324	36080686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082547_36082683_36082797_36087740_36088401_36088547_36090186
ES.8988.6	chr13	-	992	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	5	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	203.661211056227	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090322	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ES.8988.7	chr13	-	2709	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	2	-1	intron_retention	FALSE	canonical	3	512	junction_4	31.4624997240984	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090325	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36087740_36088401_36088547_36090186
ES.8988.8	chr13	-	1121	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	198.227657206639	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090337	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086071_36087670_36087740_36088401_36088547_36090186
ES.8988.9	chr13	-	3280	6	FSM	ENSMUSG00000021418.16	ENSMUST00000174852.2	3269	6	-4	-7	-4	-1	multi-exon	FALSE	canonical	3	532	junction_3	23.0338880782207	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGTTTGTTGT	NA	False	NA	-7	True	CATAAA	-22	NA	36090315	36080687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36087740_36088401_36088547_36090186
ES.8989.1	chr13	+	2169	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	3	189	3	-189	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCTCTGTGTTTCATG	NA	False	NA	NA	False	AGTAAA	-16	NA	36151838	36154182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_36151966_36152140
ES.8989.2	chr13	+	2350	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	3	8	3	-8	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAAGTATTCGGTCCCT	NA	False	NA	NA	False	AATAAA	-18	NA	36151838	36154363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_36151966_36152140
ES.899.1	chr1	-	170	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTCCT	63	False	NA	NA	False	NA	NA	NA	86021780	86021610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86021600_86021800
ES.8990.1	chr13	+	5763	1	Intergenic	novelGene_7336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGTCCCTTTTAACAT	NA	False	NA	NA	False	NA	NA	NA	36218183	36223946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_36218200_36223900
ES.8991.1	chr13	+	2156	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	-28	-3	-28	-1	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGCATTTGTCTTTTAT	NA	False	NA	12	True	AATAAA	-23	NA	36301366	36721570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ES.8991.2	chr13	+	1690	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301617	36721567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ES.8991.3	chr13	+	1039	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	6	-83	6	-1	multi-exon	FALSE	canonical	0	0	junction_1	98.7886633172046	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATAGCATTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	36301846	36721566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ES.8991.4	chr13	+	1244	5	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	93.8216392949942	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAGTGAGAGTGAACTGC	NA	False	NA	NA	False	AATAAA	-15	NA	36301858	36487011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36486822
ES.8991.5	chr13	+	1737	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	4	9	-1	-2	multi-exon	FALSE	canonical	0	0	junction_2	107.637524751798	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTGACATAGCATTTG	NA	False	NA	4	True	AATAAA	-15	NA	36301861	36721562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ES.8991.6	chr13	+	2809	5	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	4	1572	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	93.8216392949942	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATGTCTTATTATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	36301866	36488584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36486822
ES.8991.8	chr13	+	1091	6	NNC	ENSMUSG00000021420.14	novel	726	5	NA	NA	-11824	-1	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	93.2660710011953	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATAGCATTTGTCTT	NA	False	NA	8	True	AATAAA	-19	NA	36404280	36721566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_36404475_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ES.8992.1	chr13	-	1681	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-31	436	-31	-436	multi-exon	FALSE	canonical	3	325	junction_1	9.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAATAAAAATAGAT	NA	False	NA	NA	False	AGTAAA	-10	NA	36301540	36162813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36163891_36276788_36276910_36301057
ES.8992.2	chr13	-	1136	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	-115	1065	-115	-1065	multi-exon	FALSE	canonical	3	325	junction_1	9.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATTTATTTCCTGA	NA	False	NA	NA	False	AATAAA	-13	NA	36301624	36163442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_36163891_36276788_36276910_36301057
ES.8992.3	chr13	-	4661	1	Intergenic	novelGene_7337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTATATAATGTCTAC	NA	False	NA	NA	False	AAAAAG	-10	NA	36240402	36235741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36235700_36240400
ES.8992.4	chr13	-	3726	1	Intergenic	novelGene_7338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	36267484	36263758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36263800_36267500
ES.8992.5	chr13	-	5860	1	Intergenic	novelGene_7339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGTTCT	NA	False	NA	NA	False	NA	NA	NA	36296217	36290357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36290400_36296200
ES.8993.1	chr13	-	2600	1	Intergenic	novelGene_7340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCCATAGTACTGTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	36309128	36306528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36306500_36309100
ES.8994.1	chr13	-	3305	1	Intergenic	novelGene_7341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGATAAGGAGGAACAT	NA	False	NA	NA	False	ATTAAA	-41	NA	36420844	36417539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36417500_36420800
ES.8995.1	chr13	-	3934	1	Intergenic	novelGene_7342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAACAGGAAGAACTG	NA	False	NA	NA	False	AGTAAA	-34	NA	36448416	36444482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_36444500_36448400
ES.8996.1	chr13	+	551	1	Intergenic	novelGene_7343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACGAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-7	NA	36762666	36763217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_36762700_36763200
ES.8997.1	chr13	+	176	1	Intergenic	novelGene_7344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37569832	37570008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_37569800_37570000
ES.8998.1	chr13	-	605	4	NNC	ENSMUSG00000100760.2	novel	526	3	NA	NA	1846	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.24721912892465	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTGAGTCTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	37617279	37605809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_37606132_37613995_37614157_37615394_37615464_37617226
ES.8999.1	chr13	-	159	1	Intergenic	novelGene_7345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	37703788	37703629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_37703600_37703800
ES.9.1	chr1	-	187	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAAGGGCATGGCTGT	NA	False	NA	9	True	NA	NA	NA	4835416	4835229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_4835200_4835400
ES.90.1	chr1	-	7547	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-513	-56	-513	56	multi-exon	TRUE	canonical	3	88	junction_35	18.4564716033902	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGCTACAGAGA	NA	False	NA	40	True	ATTAAA	-19	NA	10303408	10207739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.12	chr1	-	4965	28	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	20604	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	28.0192957224952	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCTGTTTTCATTGT	NA	False	NA	-19	True	AATAAA	-34	NA	10259728	10207798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10214987_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663
ES.90.13	chr1	-	9057	29	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	10230	-5	intron_retention	FALSE	canonical	3	7	junction_5	28.0627031150324	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGCCCTGTTTTCATT	NA	False	NA	-21	True	AATAAA	-32	NA	10270102	10207800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953
ES.90.16	chr1	-	12929	19	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-12881	-17	intron_retention	FALSE	canonical	3	7	junction_5	29.736289505926	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAGTGTAACCCACAGC	NA	False	NA	-33	True	AATAAA	-20	NA	10244412	10207812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10243210_10243418_10243578_10244291
ES.90.20	chr1	-	7157	36	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-399	-19	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	32.8285589953974	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10303294	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10302595
ES.90.21	chr1	-	4298	5	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	85488	19	-5481	-19	3prime_fragment	FALSE	canonical	3	99	junction_2	22.0737400546441	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10217407	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942
ES.90.22	chr1	-	4630	25	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	21257	-19	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	29.6104042807029	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10259075	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981
ES.90.23	chr1	-	7148	38	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-400	-19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_32	26.1000211301617	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10303295	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279860_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.24	chr1	-	5571	31	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	10208	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	34.1742105492821	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10270124	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250193_10251220_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953
ES.90.26	chr1	-	6815	36	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-462	-19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	36.7079371943075	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10303357	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254304_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275060_10279832_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.27	chr1	-	7416	38	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-400	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	26.2170242282837	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGCAGTGTAACCCACA	NA	False	NA	-35	True	AATAAA	-18	NA	10303295	10207814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286276_10286753_10286785_10302595
ES.90.3	chr1	-	7209	37	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-416	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.6421617732236	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTTTCATTGTTTTT	NA	False	NA	-15	True	AATAAA	-38	NA	10303311	10207794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.30	chr1	-	7329	39	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-420	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	26.0429141898787	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATCAGTGCAGTGTAAC	NA	False	NA	-40	True	AATAAA	-13	NA	10303315	10207819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10230979_10231023_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.31	chr1	-	7118	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-412	272	-412	-272	multi-exon	FALSE	canonical	3	88	junction_35	18.4564716033902	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGTTTTGGGAGGTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	10303307	10208067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.32	chr1	-	6988	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-703	693	-703	426	multi-exon	FALSE	canonical	3	88	junction_35	18.4564716033902	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTCCTGCACTGTTTT	NA	False	NA	NA	False	TATAAA	-15	NA	10303598	10208488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.33	chr1	-	4659	29	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	15681	422	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	27.2715932046217	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTCCTCCTGCACTG	NA	False	NA	NA	False	TATAAA	-11	NA	10264651	10208492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481
ES.90.34	chr1	-	2561	15	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	468	418	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	33.0713514346524	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATATTGTTCCTCCTGC	2053	False	NA	NA	False	TATAAA	-7	NA	10231063	10208496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10214987_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925
ES.90.35	chr1	-	6487	36	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-402	3337	-402	-2218	5prime_fragment	FALSE	canonical	3	88	junction_33	18.6059898189496	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTCTTTTATCAGTGA	NA	False	NA	NA	False	AATAAA	-21	NA	10303297	10211132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.36	chr1	-	2837	1	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	843	18	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAGATAGGCACATTTT	3674	False	NA	NA	False	AAGAAA	-11	NA	10229442	10226605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10226600_10229400
ES.90.37	chr1	-	178	1	Genic_Genomic	ENSMUSG00000067851.12	novel	NA	NA	NA	NA	-59	-431	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	1526	False	NA	NA	False	NA	NA	NA	10231590	10231412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_10231400_10231600
ES.90.38	chr1	-	8922	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-391	30188	-391	5316	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTGTTTTCTTTAATT	NA	False	NA	NA	False	ATTAAA	-26	NA	10303286	10237983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.39	chr1	-	3588	13	NNC	ENSMUSG00000067851.12	novel	3424	20	NA	NA	15653	2890	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	39.0052524953015	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATTTACATGAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	10264679	10240409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10242083_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481
ES.90.4	chr1	-	5842	32	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	610	1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	27.6223227828674	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTTTCATTGTTTTT	NA	False	NA	-15	True	AATAAA	-38	NA	10279722	10207794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10209222_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649
ES.90.40	chr1	-	5859	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-406	33266	-406	2238	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTAGAGAAACAGT	NA	False	NA	NA	False	AATAAA	-17	NA	10303301	10241061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.41	chr1	-	3985	22	NNC	ENSMUSG00000067851.12	novel	3424	20	NA	NA	-407	1339	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.4656347115461	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTAGTAATTTCTGTT	NA	False	NA	NA	False	TATAAA	-28	NA	10303302	10241960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10242083_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.42	chr1	-	4105	22	NNC	ENSMUSG00000067851.12	novel	3424	20	NA	NA	-417	1339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.7939796637216	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTAGTAATTTCTGTT	NA	False	NA	NA	False	TATAAA	-28	NA	10303312	10241960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10242193_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.43	chr1	-	4930	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-383	34172	-383	1332	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTATCCTTTAGTAAT	NA	False	NA	NA	False	TATAAA	-21	NA	10303278	10241967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.44	chr1	-	4848	21	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-313	1330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	32.2218481779056	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTTATCCTTTAGTA	NA	False	NA	NA	False	TATAAA	-19	NA	10303208	10241969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269963_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.45	chr1	-	4064	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-406	35061	-406	443	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATGTAAAGGATACACT	NA	False	NA	NA	False	ATTAAA	-23	NA	10303301	10242856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.46	chr1	-	4061	21	ISM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	-506	35164	-506	340	5prime_fragment	FALSE	canonical	3	88	junction_18	20.6434008826065	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGTCTAACATGTTATA	NA	False	NA	NA	False	AATATA	-15	NA	10303401	10242959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.48	chr1	-	4866	20	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-413	337	intron_retention	FALSE	canonical	3	88	junction_17	21.1793554423384	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTTGTCTAACATGTT	NA	False	NA	NA	False	AATATA	-12	NA	10303308	10242962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.49	chr1	-	4023	21	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-434	337	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.2869555703228	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTTGTCTAACATGTT	NA	False	NA	NA	False	AATATA	-12	NA	10303329	10242962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10243210_10243381_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.5	chr1	-	7308	38	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-382	1	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	25.4800800179467	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTTTCATTGTTTTT	NA	False	NA	-15	True	AATAAA	-38	NA	10303277	10207794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.50	chr1	-	4142	20	FSM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	-715	-3	-715	3	multi-exon	FALSE	canonical	3	88	junction_17	20.9399616632847	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTAATGTTTTTACAT	NA	False	NA	NA	False	AATAAA	-19	NA	10303610	10243296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.52	chr1	-	4001	19	ISM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	-399	536	-399	-536	5prime_fragment	FALSE	canonical	3	88	junction_16	21.0569480630122	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCACTGTATAAATTCA	NA	False	NA	NA	False	AATAAA	-42	NA	10303294	10243835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.53	chr1	-	4042	5	ISM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	-406	37148	-406	-1062	5prime_fragment	FALSE	canonical	3	88	junction_2	10.0343161201947	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTCTTATTGGTAG	NA	False	NA	NA	False	AATAAA	-14	NA	10303301	10280447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ES.90.7	chr1	-	5986	20	NNC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-18624	0	intron_retention	FALSE	canonical	3	7	junction_4	28.971090758254	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTTTTCATTGTTTT	NA	False	NA	-16	True	AATAAA	-37	NA	10250155	10207795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10215030_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050
ES.90.8	chr1	-	7260	37	NIC	ENSMUSG00000067851.12	novel	6978	38	NA	NA	-313	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_36	26.5167516352202	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTTTTCATTGTTTT	NA	False	NA	-16	True	AATAAA	-37	NA	10303208	10207795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10302595
ES.900.1	chr1	+	4724	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-27	-1	-23	1	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGGCTAAAAGGGGGT	NA	False	NA	NA	False	NA	NA	NA	86082478	86187550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.10	chr1	+	2324	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	0	-2199	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	25.6009765438743	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTCAGTTTGCTCTCTGG	NA	False	NA	5	True	AATACA	-16	NA	86082507	86185350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.11	chr1	+	3221	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	4	1471	2	-1471	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGTATCTCAGAGTCTC	NA	False	NA	NA	False	AATATA	-15	NA	86082509	86186078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.12	chr1	+	3305	9	NNC	ENSMUSG00000062590.14	novel	1733	9	NA	NA	2	-125	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	35.1316719641978	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGCAAGGAACATTGGC	NA	False	NA	NA	False	ATTAAA	-23	NA	86082509	86105298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86092224_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535
ES.900.14	chr1	+	4526	24	NIC	ENSMUSG00000062590.14	novel	5127	25	NA	NA	3	-451	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	39.1245889353138	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAAGTGTCTTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	86082510	86205555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947_86185085_86189763_86189888_86202104_86202278_86203381
ES.900.15	chr1	+	4292	19	NNC	ENSMUSG00000062590.14	novel	3638	20	NA	NA	4	-8819	intron_retention	FALSE	canonical	1	1	junction_18	26.1751578579555	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTATGCCCCGTTT	NA	False	NA	NA	False	NA	NA	NA	86082511	86165229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86164664
ES.900.16	chr1	+	1942	19	FSM	ENSMUSG00000062590.14	ENSMUST00000155168.8	2435	19	16	477	1	-477	multi-exon	FALSE	canonical	3	78	junction_14	12.3513382090993	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCCTCCTGCCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	86082521	86140912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ES.900.17	chr1	+	5020	24	NIC	ENSMUSG00000062590.14	novel	5127	25	NA	NA	1	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	39.2896759841743	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTTATTATTATGCA	NA	False	NA	NA	False	AATAAA	-14	NA	86082521	86206005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947_86185085_86189763_86189888_86202104_86202278_86203381
ES.900.19	chr1	+	5943	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	17	-1264	2	1264	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAGCATGTTCCTTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	86082522	86188813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.2	chr1	+	2574	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-27	2149	-23	-2149	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCCCAGAGTGCTTT	NA	False	NA	55	True	NA	NA	NA	86082478	86185400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.20	chr1	+	2468	21	NNC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	4	-2202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.2972907349788	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATCTCAGTTTGCTCTC	NA	False	NA	2	True	AATACA	-13	NA	86082524	86185347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86101260_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.21	chr1	+	4189	20	NIC	ENSMUSG00000062590.14	novel	2160	21	NA	NA	-5	-2	intron_retention	FALSE	canonical	3	78	junction_13	12.5916034107771	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGCATTCTCTTTATT	NA	False	NA	6	True	AATAAA	-11	NA	86082526	86180209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
ES.900.22	chr1	+	2621	24	NIC	ENSMUSG00000062590.14	novel	5127	25	NA	NA	-4	107	combination_of_known_junctions	FALSE	canonical	0	0	junction_22	31.1440946469786	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACACATACGTCCTAC	NA	False	NA	NA	False	AATAAA	-28	NA	86082527	86196915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947_86185085_86189763_86189888_86196627
ES.900.23	chr1	+	3359	9	NNC	ENSMUSG00000062590.14	novel	1733	9	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.6927700644146	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCAGGCTGGTGTATAT	NA	False	NA	NA	False	TATAAA	-14	NA	86082528	86105428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86102926
ES.900.24	chr1	+	4478	19	FSM	ENSMUSG00000062590.14	ENSMUST00000155168.8	2435	19	24	-2067	-2	2067	multi-exon	FALSE	canonical	3	78	junction_14	12.3513382090993	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAACACTGATGACTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	86082529	86143456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ES.900.25	chr1	+	3043	5	NIC	ENSMUSG00000094638.2	novel	776	6	NA	NA	21173	7726	intron_retention	FALSE	canonical	3	91	junction_4	12.8135670287395	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86082531	86098236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86092574_86097631
ES.900.26	chr1	+	3300	9	NIC	ENSMUSG00000094638.2	novel	776	6	NA	NA	21173	23803	intron_retention	FALSE	canonical	3	91	junction_4	11.7233740876934	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGCTTATTCCTGTGG	NA	False	NA	NA	False	AATAAA	-32	NA	86082531	86114313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826
ES.900.27	chr1	+	1750	9	FSM	ENSMUSG00000062590.14	ENSMUST00000153653.2	1733	9	-9	-8	0	8	multi-exon	FALSE	canonical	3	91	junction_5	11.8947204675015	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTGGTGTATATTTA	NA	False	NA	NA	False	TATAAA	-17	NA	86082531	86105431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535
ES.900.28	chr1	+	3830	21	NNC	ENSMUSG00000062590.14	novel	2160	21	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	23.983066943158	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCTCTTTATTGT	NA	False	NA	8	True	AATAAA	-13	NA	86082532	86180211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86092224_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
ES.900.29	chr1	+	1170	7	NNC	ENSMUSG00000062590.14	novel	1733	9	NA	NA	1	2757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	42.3100329577854	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTGCCGCTGTGTGCG	NA	False	NA	NA	False	AATACA	-18	NA	86082532	86100810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86100310
ES.900.3	chr1	+	2400	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	-18	-2202	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	24.1024376360566	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATCTCAGTTTGCTCTC	NA	False	NA	2	True	AATACA	-13	NA	86082483	86185347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947
ES.900.30	chr1	+	3280	21	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	1	-1273	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	24.1024376360566	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGCCTACAGAGTA	NA	False	NA	NA	False	CATAAA	-41	NA	86082532	86186276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947
ES.900.31	chr1	+	4168	20	NNC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	2097	-2129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.8208433199497	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTGTGCCAGGGTG	NA	False	NA	75	True	NA	NA	NA	86084637	86185420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86084728_86087716_86087846_86090386_86092224_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.32	chr1	+	4885	24	NNC	ENSMUSG00000062590.14	novel	3555	25	NA	NA	2097	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_20	42.2548304863822	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTTGTTATTATTATG	NA	False	NA	NA	False	AATAAA	-12	NA	86084637	86206003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86184947_86185085_86189760_86189888_86202104_86202278_86203381_86205810_86205903
ES.900.34	chr1	+	3338	9	NIC	ENSMUSG00000062590.14	novel	2435	19	NA	NA	-7553	1880	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	32.0848484490733	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAGAAAAAAAAAAA	5536	False	NA	NA	False	NA	NA	NA	86116558	86143269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140774
ES.900.35	chr1	+	9115	3	ISM	ENSMUSG00000062590.14	ENSMUST00000150059.8	764	9	4918	31576	-1188	7149	intron_retention	FALSE	canonical	3	85	junction_2	17	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	769	False	NA	NA	False	NA	NA	NA	86129029	86148538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86130287_86135674_86135766_86140771
ES.900.36	chr1	+	2069	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGAGTGTTTTTTCG	5737	False	NA	NA	False	AATAAA	-12	NA	86138453	86140522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86138500_86140500
ES.900.4	chr1	+	3452	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-16	1260	-12	-1260	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTATTTCTTTTTTAAT	NA	False	NA	NA	False	AAAAAG	-23	NA	86082489	86186289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.5	chr1	+	4993	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	-16	-281	-12	281	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGCTAGTCATACAGT	NA	False	NA	NA	False	NA	NA	NA	86082489	86187830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ES.900.6	chr1	+	2203	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	-45	2	-10	-2	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGCATTCTCTTTATT	NA	False	NA	6	True	AATAAA	-11	NA	86082491	86180209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
ES.900.7	chr1	+	4402	19	FSM	ENSMUSG00000062590.14	ENSMUST00000155168.8	2435	19	-13	-1954	-9	1954	multi-exon	FALSE	canonical	3	78	junction_14	12.3513382090993	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCAAGCCAAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	86082492	86143343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ES.900.8	chr1	+	4700	25	FSM	ENSMUSG00000062590.14	ENSMUST00000027434.15	5127	25	-32	459	-2	-459	multi-exon	FALSE	canonical	0	0	junction_22	35.1917120530136	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATAATCCAAGTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	86082499	86205547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947_86185085_86189763_86189888_86202104_86202278_86203381
ES.900.9	chr1	+	6001	23	NIC	ENSMUSG00000062590.14	novel	4696	22	NA	NA	2	1252	combination_of_known_junctions	FALSE	canonical	1	1	junction_20	31.3303182712083	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGGGGAAATACAGAGC	NA	False	NA	NA	False	AATAAA	-19	NA	86082503	86188801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86146569_86146621_86172287_86172393_86179998_86180115_86184947
ES.9000.1	chr13	+	180	1	Intergenic	novelGene_7346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	37720914	37721094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_37720900_37721100
ES.9001.1	chr13	-	165	1	Intergenic	novelGene_7347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	37798353	37798188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_37798200_37798400
ES.9002.1	chr13	+	183	1	Intergenic	novelGene_7348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTAATAAATAATAATC	1284	False	NA	NA	False	NA	NA	NA	37897847	37898030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_37897800_37898000
ES.9003.1	chr13	-	516	2	NIC	ENSMUSG00000114732.2	novel	385	3	NA	NA	33	336	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACATGTCTCTACCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	37900254	37882907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_37883395_37900225
ES.9004.1	chr13	+	159	1	Intergenic	novelGene_7349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATTTTTTAA	3077	False	NA	NA	False	NA	NA	NA	37940074	37940233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_37940100_37940200
ES.9005.1	chr13	-	210	1	Intergenic	novelGene_7350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTGATTAATAAATTC	NA	False	NA	NA	False	NA	NA	NA	37956447	37956237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_37956200_37956400
ES.9006.1	chr13	+	8317	12	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-14	684	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1925174820305	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGAGGGTGTTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	37962361	38120205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_37962660_38041960_38042070_38042960_38043057_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.10	chr13	+	8640	14	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-213	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	32.5727224609904	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACGACCAACCTGTGAG	NA	False	NA	3	True	AATAAA	-19	NA	38009737	38135978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38115952_38116005_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.11	chr13	+	5933	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-202	208	combination_of_known_junctions	TRUE	canonical	3	18	junction_10	28.9242384557992	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCGGAGGACCTTTTCA	NA	False	NA	NA	False	AAAAAG	-31	NA	38009748	38133390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ES.9006.12	chr13	+	8793	14	NNC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-201	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.273907080306	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCACACGACCAACCTGTG	NA	False	NA	1	True	AATAAA	-17	NA	38009749	38135976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38010207_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.13	chr13	+	8516	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-194	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	28.9242384557992	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	6	True	AATAAA	-22	NA	38009756	38135981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ES.9006.14	chr13	+	8515	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-194	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_12	31.2901963702513	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACACGACCAACCTGTGA	NA	False	NA	2	True	AATAAA	-18	NA	38009756	38135977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.15	chr13	+	8667	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-183	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	24.8678451463375	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	6	True	AATAAA	-22	NA	38009767	38135981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.16	chr13	+	8341	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-182	-1	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	35.0958545737878	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACACGACCAACCTGTGA	NA	False	NA	2	True	AATAAA	-18	NA	38009768	38135977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131481_38132618
ES.9006.17	chr13	+	9147	14	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-180	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.9708701802911	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGACCAACCTGTGAGTT	NA	False	NA	5	True	AATAAA	-21	NA	38009770	38135980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38081029_38081514_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.18	chr13	+	8788	12	NIC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-175	-1	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	32.981587650793	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGACCAACCTGTGAGTT	NA	False	NA	5	True	AATAAA	-21	NA	38009775	38135980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ES.9006.19	chr13	+	8642	13	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.356091646963	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38009810	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116495_38125518_38125681_38130832_38131640_38132618
ES.9006.2	chr13	+	8568	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-2	2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	32.2700196260657	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCAACCTGTGAGTTCCT	NA	False	NA	8	True	AATAAA	-24	NA	37962373	38135983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_37962534_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.20	chr13	+	8748	13	NIC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_12	34.4778511833644	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACGACCAACCTGTGAG	NA	False	NA	3	True	AATAAA	-19	NA	38009816	38135978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.21	chr13	+	9794	10	NIC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-110	2476	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	19.6920739836559	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGATTATGCCTATAC	NA	False	NA	NA	False	NA	NA	NA	38009840	38121997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.22	chr13	+	5208	10	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	35.5208163625462	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38009931	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38130832_38131640_38132618
ES.9006.23	chr13	+	8348	13	NNC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	38.5201967227006	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38009994	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38010239_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ES.9006.24	chr13	+	4598	10	FSM	ENSMUSG00000039087.18	ENSMUST00000110238.10	7437	10	-13	2852	-13	0	multi-exon	FALSE	canonical	3	20	junction_1	27.5053305720281	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38010000	38116669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.25	chr13	+	5293	12	NIC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-11	-488	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	36.7938191000464	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGAGGTGCAAAT	NA	False	NA	NA	False	NA	NA	NA	38010002	38135482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38125518_38125681_38130832_38131640_38132618
ES.9006.26	chr13	+	8722	13	FSM	ENSMUSG00000039087.18	ENSMUST00000128570.9	8436	13	-288	2	-11	1	multi-exon	FALSE	canonical	3	20	junction_1	29.1099448451708	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGACCAACCTGTGAGT	NA	False	NA	4	True	AATAAA	-20	NA	38010002	38135979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.27	chr13	+	8345	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	38.2084322829485	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38010049	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131481_38132618
ES.9006.29	chr13	+	8734	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-295	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	32.2700196260657	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38010612	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010952_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.3	chr13	+	8405	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.0317993981749	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	6	True	AATAAA	-22	NA	37962375	38135981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_37962534_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.30	chr13	+	8551	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-265	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.0317993981749	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCACACGACCAACCTGTG	NA	False	NA	1	True	AATAAA	-17	NA	38010642	38135976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010952_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.31	chr13	+	4313	10	NNC	ENSMUSG00000039087.18	novel	4320	10	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	42.7302766573056	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAGTGGTCATAGGCT	90	False	NA	13	True	AATAAA	-13	NA	38010912	38116667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010952_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100135_38100434_38100572_38112098_38112289_38113533
ES.9006.32	chr13	+	175	1	Intergenic	novelGene_7351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGAGT	8034	False	NA	NA	False	NA	NA	NA	38018856	38019031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_38018900_38019000
ES.9006.33	chr13	+	3608	10	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	10240	-779	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.2814410894068	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTACTCTGCTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	38021608	38115888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38021720_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.34	chr13	+	8332	13	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	10255	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5255468536658	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38021623	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38021720_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.35	chr13	+	190	1	Intergenic	novelGene_7353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCACACCATGACT	NA	False	NA	NA	False	NA	NA	NA	38033515	38033705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_38033500_38033700
ES.9006.36	chr13	+	4435	10	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-3721	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.2814410894068	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAGTGGTCATAGGCT	916	False	NA	13	True	AATAAA	-13	NA	38038188	38116667	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38038348_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.37	chr13	+	8537	13	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-3704	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.8658891050686	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	933	False	NA	-5	True	AATAAA	-11	NA	38038205	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38038348_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.38	chr13	+	4395	10	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-372	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.2814410894068	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGTGGTCATAGGCTC	4265	False	NA	14	True	AATAAA	-14	NA	38041537	38116668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38041656_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.39	chr13	+	8616	14	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-368	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8031337732327	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	4269	False	NA	6	True	AATAAA	-22	NA	38041541	38135981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38041656_38042960_38043057_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.4	chr13	+	4435	10	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	32.4029414912281	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	37962376	38116669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_37962534_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.40	chr13	+	4531	11	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.9433755325572	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGTGGTCATAGGCTC	4639	False	NA	14	True	AATAAA	-14	NA	38041911	38116668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38042070_38042960_38043057_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.41	chr13	+	8402	12	FSM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	-1	-6	-1	-2	multi-exon	FALSE	canonical	3	43	junction_9	23.6520926685844	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCACACGACCAACCTGTG	NA	False	NA	1	True	AATAAA	-17	NA	38072845	38135976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.42	chr13	+	8296	11	ISM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	3678	0	3678	0	3prime_fragment	FALSE	canonical	3	43	junction_8	22.7499450548787	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38076524	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.43	chr13	+	8024	5	ISM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	10772	15024	10772	1425	internal_fragment	FALSE	canonical	3	75	junction_2	13.1790553530972	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGATAAGTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	38083618	38120946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.44	chr13	+	8064	6	ISM	ENSMUSG00000039087.18	ENSMUST00000124268.8	9702	12	27092	-3	26655	0	3prime_fragment	FALSE	canonical	3	18	junction_4	28.8541158242633	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	6	True	AATAAA	-22	NA	38099501	38135981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ES.9006.45	chr13	+	5087	4	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-16074	-623	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	17.7826382244655	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCTGGGTGAATCATAG	6092	False	NA	NA	False	ATTAAA	-24	NA	38114917	38135347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38116466_38125518_38125681_38130832_38131481_38132618
ES.9006.46	chr13	+	4529	3	ISM	ENSMUSG00000039087.18	ENSMUST00000124268.8	9702	12	43221	473	-15361	-465	3prime_fragment	FALSE	canonical	3	18	junction_1	21	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTGTTGTTTTTTG	6805	False	NA	NA	False	NA	NA	NA	38115630	38135505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38116466_38130832_38131640_38132618
ES.9006.47	chr13	+	2488	1	Genic_Genomic	ENSMUSG00000039087.18	novel	NA	NA	NA	NA	-13718	240	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGGCCCTTAAGTCT	8448	False	NA	NA	False	NA	NA	NA	38117273	38119761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_38117300_38119800
ES.9006.48	chr13	+	2599	1	Genic_Genomic	ENSMUSG00000039087.18	novel	NA	NA	NA	NA	-12105	1964	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTGGATTGCTGACGT	NA	False	NA	NA	False	NA	NA	NA	38118886	38121485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_38118900_38121500
ES.9006.49	chr13	+	4438	2	FSM	ENSMUSG00000039087.18	ENSMUST00000162849.2	1053	2	-597	-2788	-597	0	multi-exon	FALSE	canonical	2	12	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38130394	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38131481_38132618
ES.9006.5	chr13	+	4572	12	NNC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.1925174820305	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	37962444	38116669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_37962534_38041960_38042070_38042960_38043057_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.50	chr13	+	4164	2	ISM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	57981	0	-164	0	3prime_fragment	FALSE	canonical	3	60	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38130827	38135970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38131640_38132618
ES.9006.51	chr13	+	4606	1	Genic_Genomic	ENSMUSG00000039087.18	novel	NA	NA	NA	NA	2496	2112	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAATGTTCTAA	NA	False	NA	NA	False	NA	NA	NA	38133487	38138093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_38133500_38138100
ES.9006.6	chr13	+	4951	11	NNC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	36.9302044402681	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38009406	38116669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38010269_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9006.7	chr13	+	9076	14	NNC	ENSMUSG00000039087.18	novel	8436	13	NA	NA	-544	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	34.7925381376405	244	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACGACCAACCTGTGAG	NA	False	NA	3	True	AATAAA	-19	NA	38009406	38135978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38010029_38010269_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.8	chr13	+	8512	13	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-247	-208	combination_of_known_junctions	TRUE	canonical	3	43	junction_10	24.8678451463375	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGTAGAATTCATATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	38009703	38135762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ES.9006.9	chr13	+	4592	10	NIC	ENSMUSG00000039087.18	novel	7437	10	NA	NA	-236	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	19.6920739836559	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38009714	38116669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ES.9007.1	chr13	-	224	1	Intergenic	novelGene_7352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTCAGAAGGGCTAGAA	5571	False	NA	NA	False	NA	NA	NA	38032406	38032182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38032200_38032400
ES.9008.1	chr13	+	5156	1	Antisense	novelGene_ENSMUSG00000021427.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGGAGCA	6893	False	NA	NA	False	GGGGCT	-26	NA	38158630	38163786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38158600_38163800
ES.9009.1	chr13	+	3696	1	Antisense	novelGene_ENSMUSG00000021427.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGCAGTGGTGGCACA	NA	False	NA	NA	False	AAGAAA	-17	NA	38171452	38175148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38171500_38175100
ES.9009.2	chr13	+	3312	1	Antisense	novelGene_ENSMUSG00000021427.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTCTGTGTACGGGTGTT	NA	False	NA	NA	False	TTTAAA	-9	NA	38171452	38174764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38171500_38174800
ES.9009.3	chr13	+	1972	2	Antisense	novelGene_ENSMUSG00000021427.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGCAGTGGTGGCACA	NA	False	NA	NA	False	AAGAAA	-17	NA	38171452	38175148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38171756_38173479
ES.901.1	chr1	-	158	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	86098596	86098438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86098400_86098600
ES.9010.1	chr13	-	1761	8	FSM	ENSMUSG00000021427.11	ENSMUST00000225319.2	1610	8	-83	-68	-9	6	multi-exon	FALSE	canonical	0	0	junction_1	347.400844758293	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACATCTGAACCGCGCT	5897	False	NA	NA	False	NA	NA	NA	38178142	38150574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38151460_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.10	chr13	-	4567	10	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-14	-4592	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	417.354927852145	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTGGCAGTGTGTGG	5892	False	NA	-8	True	ATTAAA	-18	NA	38178147	38159968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38161630_38161678_38161966_38162044_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.11	chr13	-	4232	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	21	-4594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.416072243844	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACATGTGGCAGTGTGT	5927	False	NA	-10	True	ATTAAA	-45	NA	38178112	38159970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38162953_38163378_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.12	chr13	-	4325	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	51	4957	-9	-4957	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTAGTGTGTTTTCCTTTC	5897	False	NA	NA	False	NA	NA	NA	38178142	38160333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.13	chr13	-	3810	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	50	5473	-10	-5473	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTTCTCATTTCTT	5896	False	NA	0	True	AGTAAA	-23	NA	38178143	38160849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.14	chr13	-	3147	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-35	6221	-35	-6221	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTTTCAGAATTTATC	5811	False	NA	1	True	AATATA	-18	NA	38178228	38161597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.15	chr13	-	2718	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	5	6610	5	-6610	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTGTTTAACTAAAAACC	5851	False	NA	1	True	ATTAAA	-16	NA	38178188	38161986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.16	chr13	-	2756	8	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	26	-6611	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	351.47160015325	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGTTTAACTAAAAAC	5932	False	NA	0	True	ATTAAA	-15	NA	38178107	38161987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175852_38176086_38177980
ES.9010.17	chr13	-	4180	7	NIC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	6	-6612	intron_retention	FALSE	canonical	3	888	junction_3	68.3286583766691	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATAGTGTTTAACTAAAAA	5852	False	NA	-1	True	ATTAAA	-14	NA	38178187	38161988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.18	chr13	-	2407	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-6	-6613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.416072243844	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATAGTGTTTAACTAAAA	5900	False	NA	-2	True	ATTAAA	-13	NA	38178139	38161989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38162534_38162792_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.2	chr13	-	2571	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	5	804	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.416072243844	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCACTCTTAAGCTACA	5851	False	NA	NA	False	TATAAA	-19	NA	38178188	38154572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38154612_38162172_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.20	chr13	-	2576	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-3	6760	-3	-6760	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTATGGTTTTTTTA	5843	False	NA	-9	True	NA	NA	NA	38178196	38162136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.21	chr13	-	2551	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-3	-6763	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	431.922862760239	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAACTGTATGGTTTTT	5903	False	NA	-12	True	NA	NA	NA	38178136	38162139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38174945_38174984_38175972_38176086_38177980
ES.9010.22	chr13	-	3947	7	NIC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-3	-6794	intron_retention	FALSE	canonical	3	888	junction_3	68.3286583766691	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTGTATAATCTGTTT	5903	False	NA	-43	True	AATATA	-18	NA	38178136	38162170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.23	chr13	-	2557	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	24	-6796	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	426.510972162499	735	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTGTATAATCTGT	5930	False	NA	-45	True	AATATA	-16	NA	38178109	38162172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38163783_38165663_38165768_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.24	chr13	-	2735	8	NIC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	172	-6796	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	347.599875531318	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTGTATAATCTGT	6152	False	NA	-45	True	AATATA	-16	NA	38177887	38162172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177476
ES.9010.26	chr13	-	2336	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	46	6951	-14	-6951	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAACGTGTAAGCCAAA	5892	False	NA	NA	False	AATAAA	-27	NA	38178147	38162327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.27	chr13	-	1269	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-22	8086	-22	-8086	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTGTCTTACCAGAAT	5824	False	NA	44	True	ATTAAA	-24	NA	38178215	38163462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.3	chr13	-	8438	2	ISM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	10793	0	10280	0	3prime_fragment	FALSE	canonical	3	1079	junction_1	0	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGCCTCCAAAGATGAG	6459	False	NA	NA	False	AATAAA	-18	NA	38167400	38155376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_38163783_38167368
ES.9010.4	chr13	-	5860	2	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	16260	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGGCCTCCAAAGATGA	NA	False	NA	NA	False	AATAAA	-17	NA	38161420	38155377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38156219_38156401
ES.9010.5	chr13	-	9129	1	NIC	ENSMUSG00000021427.11	novel	1825	10	NA	NA	10841	-2334	mono-exon	FALSE	NA	NA	NA	NA	NA	759	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGACTTTTCAGAAATCAA	7020	False	NA	NA	False	AAAACA	-1	NA	38166839	38157710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38157700_38166800
ES.9010.6	chr13	-	6947	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	50	2336	-10	-2336	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGACTTTTCAGAAATC	5896	False	NA	NA	False	NA	NA	NA	38178143	38157712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.7	chr13	-	4751	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	-4	4586	-4	-4586	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCAGTGTGTGGTGGTTC	5842	False	NA	-2	True	ATTAAA	-24	NA	38178197	38159962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.8	chr13	-	4610	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	0	-4589	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.416072243844	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGCAGTGTGTGGTGG	5906	False	NA	-5	True	ATTAAA	-21	NA	38178133	38159965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38161825_38161898_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9010.9	chr13	-	3990	9	NNC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	-8	-4590	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	334.416072243844	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGGCAGTGTGTGGTG	5898	False	NA	-6	True	ATTAAA	-20	NA	38178141	38159966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38160856_38161556_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ES.9011.1	chr13	-	172	1	Intergenic	novelGene_7354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGAATCATTAGATGT	5065	False	NA	NA	False	NA	NA	NA	38186733	38186561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38186600_38186700
ES.9012.1	chr13	-	4062	9	ISM	ENSMUSG00000044566.16	ENSMUST00000110233.8	2875	13	-53	8127	-39	6732	5prime_fragment	FALSE	canonical	0	0	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGGGAGATGGAAATGT	NA	False	NA	NA	False	NA	NA	NA	38220952	38198154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_38199764_38200386_38200468_38201272_38201384_38203142_38203290_38206388_38207445_38209258_38209780_38212078_38212167_38216340_38216601_38220763
ES.9012.2	chr13	-	2921	3	NIC	ENSMUSG00000044566.16	novel	1226	5	NA	NA	-25	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGAGTATTCTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	38221070	38204887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38207445_38212078_38212167_38220794
ES.9012.3	chr13	-	3308	4	NIC	ENSMUSG00000044566.16	novel	1226	5	NA	NA	-23	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAGAGTATTCTTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	38220936	38204887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38207445_38209258_38209780_38212078_38212167_38220794
ES.9012.4	chr13	-	859	1	Genic_Genomic	ENSMUSG00000044566.16	novel	NA	NA	NA	NA	-137	-13117	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAGAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	38221182	38220323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_38220300_38221200
ES.9013.1	chr13	+	2490	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	248	0	-2	0	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	4736	False	NA	18	True	AATAAA	-19	NA	38221218	38245409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.10	chr13	+	2386	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	31	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	56.0656702002215	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4820	False	NA	14	True	AATAAA	-15	NA	38221302	38245405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243931_38244069_38244730
ES.9013.2	chr13	+	3471	15	NIC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	6	-3	intron_retention	FALSE	canonical	3	187	junction_3	19.2406881798093	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTAGTTTGCATTCTTG	4744	False	NA	15	True	AATAAA	-16	NA	38221226	38245406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.3	chr13	+	3014	14	NIC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	7	2	intron_retention	FALSE	canonical	1	4	junction_4	60.8678848678351	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4745	False	NA	14	True	AATAAA	-15	NA	38221227	38245405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38231220_38231314_38232855_38233133_38234199_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.4	chr13	+	2656	17	NNC	ENSMUSG00000021428.10	novel	2738	17	NA	NA	10	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.5998187384635	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTAGTTTGCATTCTT	4748	False	NA	14	True	AATAAA	-15	NA	38221230	38245405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38221690_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.5	chr13	+	2547	3	FSM	ENSMUSG00000021428.10	ENSMUST00000223910.2	2509	3	14	-52	-11	52	multi-exon	FALSE	canonical	3	223	junction_2	6	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	4752	False	NA	NA	False	NA	NA	NA	38221234	38229098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38221508_38224048_38224251_38227026
ES.9013.6	chr13	+	2583	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	271	-116	-4	116	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGTTGACAACATAAAAT	4759	False	NA	NA	False	AATAAA	-19	NA	38221241	38245525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.7	chr13	+	2180	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	273	285	-2	-165	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTTGTTTTCTTTGTC	4761	False	NA	NA	False	NA	NA	NA	38221243	38245124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9013.8	chr13	+	1800	4	ISM	ENSMUSG00000021428.10	ENSMUST00000226006.2	2307	5	-14	2450	-2	81	5prime_fragment	FALSE	canonical	3	187	junction_3	20.3960780543711	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTCTCTGAATGGAAA	4761	False	NA	NA	False	NA	NA	NA	38221243	38229127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884
ES.9013.9	chr13	+	3856	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	279	-1397	4	1397	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTTCATCCCCACTG	4767	False	NA	NA	False	NA	NA	NA	38221249	38246806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ES.9014.1	chr13	-	156	1	Intergenic	novelGene_7355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38229881	38229725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38229700_38229900
ES.9015.1	chr13	-	2200	4	Antisense	novelGene_ENSMUSG00000021428.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTCCGGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	38244049	38238311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_38240202_38241110_38241233_38242663_38242714_38243911
ES.9016.1	chr13	-	2269	2	Intergenic	novelGene_7356	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTTCTCAAGCAACAATCT	NA	False	NA	NA	False	AGTAAA	-21	NA	38263442	38261029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38262618_38262761
ES.9017.1	chr13	-	177	1	Intergenic	novelGene_7357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGTGTGAATGCA	NA	False	NA	-2	True	NA	NA	NA	38268018	38267841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38267800_38268000
ES.9018.1	chr13	+	9712	24	FSM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	-120	0	-120	0	multi-exon	FALSE	canonical	2	11	junction_1	5.11863048791702	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	6376	False	NA	35	True	AATAAA	-17	NA	38335149	38382553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38377632_38378671
ES.9018.2	chr13	+	7833	24	FSM	ENSMUSG00000054889.11	ENSMUST00000127906.8	7761	24	-72	0	-38	0	multi-exon	FALSE	canonical	2	5	junction_23	4.83137195933534	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	6458	False	NA	35	True	AATAAA	-17	NA	38335231	38382553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38375835_38378671
ES.9018.3	chr13	+	8572	23	NIC	ENSMUSG00000054889.11	novel	7761	24	NA	NA	9	0	intron_retention	FALSE	canonical	2	5	junction_22	4.87382111196184	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	6505	False	NA	35	True	AATAAA	-17	NA	38335278	38382553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38375835_38378671
ES.9018.5	chr13	+	7997	14	ISM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	27752	0	679	0	3prime_fragment	FALSE	canonical	2	13	junction_3	5.09321395607595	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	NA	False	NA	35	True	AATAAA	-17	NA	38363021	38382553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38377632_38378671
ES.9018.6	chr13	+	4800	2	NNC	ENSMUSG00000054889.11	novel	9592	24	NA	NA	13040	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTTGTGTTTTGATTT	NA	False	NA	33	True	AATAAA	-15	NA	38375382	38382551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38376303_38378671
ES.9019.1	chr13	-	3160	1	Antisense	novelGene_ENSMUSG00000054889.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAACT	NA	False	NA	NA	False	AATGAA	-36	NA	38377666	38374506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_38374500_38377700
ES.902.1	chr1	+	204	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGATTGAGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	86210416	86210620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86210400_86210600
ES.9020.1	chr13	+	4425	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-38	88	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTAGATTTTCCTTA	NA	False	NA	24	True	AATAAA	-32	NA	38388875	38411044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
ES.9020.10	chr13	+	1171	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	0	614	0	71	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAATTGTACACTACA	NA	False	NA	7	True	AATAAA	-15	NA	38388920	38411027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.11	chr13	+	3495	9	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	-8	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTAAGTTGTTTGAA	NA	False	NA	15	True	ATTAAA	-16	NA	38388920	38411631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.12	chr13	+	1961	11	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	92.0817571509145	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTAAGTTGTTTGAA	NA	False	NA	15	True	ATTAAA	-16	NA	38388920	38411631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399033_38399157_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.13	chr13	+	5709	3	ISM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	7	-187	0	187	intron_retention	FALSE	canonical	3	222	junction_2	15	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388920	38399593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38389105_38393852_38393967_38394182
ES.9020.14	chr13	+	6362	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	79	intron_retention	FALSE	canonical	1	67	junction_5	61.9618052200099	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388920	38411035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.15	chr13	+	4908	4	FSM	ENSMUSG00000021431.16	ENSMUST00000223814.2	3740	4	8	-1176	2	187	multi-exon	FALSE	canonical	3	222	junction_2	12.8149218578274	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388922	38399593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042
ES.9020.16	chr13	+	2444	10	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	3	-2	intron_retention	FALSE	non_canonical	0	0	junction_5	86.287775767565	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTTGCATAGGGGAAAA	NA	False	NA	-66	True	AATAAA	-19	NA	38388923	38410954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398662_38399032_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.17	chr13	+	1045	6	FSM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	13	-187	0	187	multi-exon	FALSE	canonical	3	20	junction_5	91.8267934755429	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388926	38399593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399039
ES.9020.18	chr13	+	1759	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	13	13	7	-11	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGTTGTAAGTTGTTT	NA	False	NA	12	True	ATTAAA	-13	NA	38388933	38411628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.19	chr13	+	5053	3	NIC	ENSMUSG00000021431.16	novel	3740	4	NA	NA	67	187	intron_retention	FALSE	canonical	3	245	junction_2	3.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388993	38399593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38394244_38395042
ES.9020.2	chr13	+	3015	10	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-38	69	intron_retention	FALSE	canonical	0	0	junction_4	99.7950987193012	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCAAAATTGTACACTA	NA	False	NA	5	True	AATAAA	-13	NA	38388875	38411025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38396513_38396595_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.20	chr13	+	181	1	Intergenic	novelGene_7358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAACTTA	NA	False	NA	NA	False	NA	NA	NA	38390552	38390733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_38390600_38390700
ES.9020.21	chr13	+	2774	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	4859	71	intron_retention	FALSE	canonical	1	67	junction_5	66.3515682726859	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAATTGTACACTACA	NA	False	NA	7	True	AATAAA	-15	NA	38393785	38411027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.22	chr13	+	2665	6	NIC	ENSMUSG00000021431.16	novel	6689	8	NA	NA	-1324	-1	intron_retention	FALSE	canonical	1	20	junction_1	85.9036669764452	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGTTTGAAGTGCTGT	NA	False	NA	22	True	ATTAAA	-23	NA	38398587	38411638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38398644_38399039_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.23	chr13	+	4288	4	ISM	ENSMUSG00000021431.16	ENSMUST00000223680.2	6689	8	11029	598	44	85	3prime_fragment	FALSE	canonical	3	160	junction_1	35.7988205888903	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACACACTTAGATTTTCC	NA	False	NA	21	True	AATAAA	-29	NA	38399955	38411041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38400490_38401349_38404753_38405210_38405370_38410849
ES.9020.24	chr13	+	4695	4	ISM	ENSMUSG00000021431.16	ENSMUST00000223680.2	6689	8	11212	8	227	-8	3prime_fragment	FALSE	canonical	3	160	junction_1	35.7988205888903	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTAAGTTGTTTGAA	NA	False	NA	15	True	ATTAAA	-16	NA	38400138	38411631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38400490_38401349_38404753_38405210_38405370_38410849
ES.9020.25	chr13	+	2406	5	ISM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	11340	-1015	349	1015	3prime_fragment	FALSE	canonical	1	67	junction_2	67.9609262738524	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATGCAATCAAAGGTCC	NA	False	NA	NA	False	CATAAA	-18	NA	38400260	38412656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.26	chr13	+	4483	3	ISM	ENSMUSG00000021431.16	ENSMUST00000178564.2	847	9	11680	-129	695	71	3prime_fragment	FALSE	canonical	3	213	junction_2	17	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCAAAATTGTACACTACA	NA	False	NA	7	True	AATAAA	-15	NA	38400606	38411027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38404753_38405210_38405370_38410849
ES.9020.27	chr13	+	5606	1	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-2259	-2457	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATGTATATGTGTGT	NA	False	NA	NA	False	NA	NA	NA	38402835	38408441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38402800_38408400
ES.9020.3	chr13	+	4407	8	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-12	87	intron_retention	FALSE	canonical	0	0	junction_4	83.3747380132346	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACACTTAGATTTTCCTT	NA	False	NA	23	True	AATAAA	-31	NA	38388901	38411043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395127_38400300_38400490_38401349_38404753_38405210_38405370_38410849
ES.9020.4	chr13	+	2905	9	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	79	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388914	38411035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.5	chr13	+	4974	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	1	-6	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAAGTTGTTTGAAGT	NA	False	NA	17	True	ATTAAA	-18	NA	38388915	38411633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
ES.9020.6	chr13	+	1451	5	ISM	ENSMUSG00000021431.16	ENSMUST00000223557.2	871	6	3	-187	2	187	intron_retention	FALSE	canonical	3	102	junction_4	60.6356949329353	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCACTGTGCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	38388916	38399593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580
ES.9020.7	chr13	+	2495	10	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	70	intron_retention	FALSE	canonical	1	20	junction_5	82.099909023874	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAAAATTGTACACTAC	NA	False	NA	6	True	AATAAA	-14	NA	38388919	38411026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399039_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.8	chr13	+	1183	9	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.1585928880447	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAATTGTACACTACACA	NA	False	NA	9	True	AATAAA	-17	NA	38388919	38411029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395127_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9020.9	chr13	+	1772	9	NNC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	-1	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.1585928880447	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTATTTTGTATGTTG	NA	False	NA	2	True	ATTAAA	-3	NA	38388919	38411618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395127_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ES.9021.1	chr13	-	292	1	Intergenic	novelGene_7359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGGGAGGTTGACTG	NA	False	NA	NA	False	AATAAA	-17	NA	38438612	38438320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38438300_38438600
ES.9022.1	chr13	+	177	1	Intergenic	novelGene_7360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38458049	38458226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_38458000_38458200
ES.9023.1	chr13	-	172	1	Intergenic	novelGene_7361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTTTAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	38509888	38509716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38509700_38509900
ES.9024.1	chr13	-	181	1	Intergenic	novelGene_7362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGCGAGCTTGTG	1117	False	NA	NA	False	NA	NA	NA	38527709	38527528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38527500_38527700
ES.9025.1	chr13	+	2355	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	-17	1255	-17	-1255	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGTGGTTGCCATTA	NA	False	NA	NA	False	AAAAAG	-19	NA	38529065	38683023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ES.9025.2	chr13	+	3480	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	-16	129	-16	-129	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACTTACAGCCTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	38529066	38684149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ES.9025.4	chr13	+	3678	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	59	-144	59	144	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGGGCGCCTCTGCTCC	NA	False	NA	NA	False	AATAAA	-15	NA	38529141	38684422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ES.9025.5	chr13	+	3472	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	121	0	121	0	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCAAATTGTACCACT	NA	False	NA	NA	False	AAAAAG	-15	NA	38529203	38684278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ES.9025.6	chr13	+	2716	7	NNC	ENSMUSG00000039004.7	novel	3593	7	NA	NA	-138	-129	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.40947204913349	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTACTTACAGCCTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	38529990	38684149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_38530564_38653589_38653783_38668706_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ES.9026.1	chr13	+	1099	2	Antisense	novelGene_ENSMUSG00000038991.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38688583	38691824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38688782_38690923
ES.9026.2	chr13	+	3279	1	Antisense	novelGene_ENSMUSG00000038991.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATACCTTCTTGCCATCT	NA	False	NA	NA	False	NA	NA	NA	38688583	38691862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38688600_38691900
ES.9027.1	chr13	-	3624	1	Intergenic	novelGene_7363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38537814	38534190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38534200_38537800
ES.9028.1	chr13	-	2698	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	-42	187	-42	7	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	38712508	38684241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.10	chr13	-	2649	10	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	-5	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	350.627092542335	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	38712471	38684241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687525_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.12	chr13	-	2645	10	FSM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	-59	0	-59	0	multi-exon	FALSE	canonical	0	0	junction_9	335.794947718962	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38711949	38684248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38711650
ES.9028.13	chr13	-	4771	9	NIC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	24	0	intron_retention	FALSE	canonical	3	973	junction_5	105.814696521797	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38712442	38684248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.15	chr13	-	2627	10	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	357.123072467866	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38712453	38684248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697132_38702958_38703065_38707304_38707455_38712163
ES.9028.16	chr13	-	2160	8	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	-7419	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	376.461505742782	810	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38697337	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38697263
ES.9028.18	chr13	-	2595	10	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	353.522276525822	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38712422	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688785_38690932_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.19	chr13	-	1765	11	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	337.075421827222	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38712430	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38684777_38685620_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.20	chr13	-	5459	9	NIC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	11	0	intron_retention	FALSE	canonical	3	976	junction_6	101.717669925141	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38712455	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.21	chr13	-	2229	8	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	-10819	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	376.80688498411	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38700737	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38700594
ES.9028.23	chr13	-	2620	10	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	356.044247492976	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38712454	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707317_38707455_38712163
ES.9028.25	chr13	-	2593	10	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	356.044247492976	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	38712420	38684252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707310_38707455_38712163
ES.9028.27	chr13	-	1904	4	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	569.381145533367	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAAAAGTCTGGTC	NA	False	NA	NA	False	AATAAA	-12	NA	38712442	38684253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38685685_38703020_38703065_38707304_38707455_38712163
ES.9028.31	chr13	-	1585	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	11	1247	11	-1049	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGTCAAGGAAAGCCAA	NA	False	NA	NA	False	ATTAAA	-23	NA	38712455	38685301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.6	chr13	-	2598	11	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	20	7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	338.798170006864	811	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	38712446	38684241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38684806_38684843_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ES.9028.7	chr13	-	5610	5	ISM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	16208	-7	-5764	7	intron_retention	FALSE	canonical	3	1041	junction_1	46.1573396113771	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTCTTTGCTTAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	38695682	38684241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869
ES.9029.1	chr13	-	176	1	Intergenic	novelGene_7364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTACAAGAGTATA	NA	False	NA	NA	False	NA	NA	NA	38742663	38742487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38742500_38742700
ES.903.1	chr1	+	174	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTACTGAT	NA	False	NA	NA	False	NA	NA	NA	86211649	86211823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86211600_86211800
ES.9030.1	chr13	-	5586	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	39	9	-9	-9	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAGTCAACAAGAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	38819046	38782825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ES.9030.2	chr13	-	1734	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	37	3863	-11	-3863	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTATTTGAGATTTC	NA	False	NA	-26	True	ATTAAA	-17	NA	38819048	38786679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ES.9030.3	chr13	-	385	1	Intergenic	novelGene_7365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAAAGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	38812130	38811745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38811700_38812100
ES.9031.1	chr13	-	3053	1	NIC	ENSMUSG00000001707.9	novel	2553	4	NA	NA	10214	-1482	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTGTTATCTTTCC	NA	False	NA	-1	True	AGTAAA	-19	NA	38832717	38829664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38829700_38832700
ES.9031.2	chr13	-	1138	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	-69	1484	-69	-1484	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTTTGTTATCTTT	NA	False	NA	-3	True	AGTAAA	-17	NA	38843103	38829666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ES.9031.3	chr13	-	3686	3	ISM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	49	1484	1	-1484	intron_retention	FALSE	canonical	3	1490	junction_1	0.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTTTGTTATCTTT	NA	False	NA	-3	True	AGTAAA	-17	NA	38842985	38829666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_38830287_38838971_38839068_38840015
ES.9031.4	chr13	-	1978	3	NIC	ENSMUSG00000001707.9	novel	2553	4	NA	NA	-16	-1491	intron_retention	FALSE	canonical	3	1400	junction_2	45	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAACTTTTGTTTGT	NA	False	NA	-10	True	AGTAAA	-10	NA	38843002	38829673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_38830287_38838971_38840217_38842882
ES.9031.5	chr13	-	1009	4	NNC	ENSMUSG00000001707.9	novel	2553	4	NA	NA	-2	-1491	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_3	690.372041406339	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAACTTTTGTTTGT	NA	False	NA	-10	True	AGTAAA	-10	NA	38842988	38829673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_38830287_38838971_38839068_38840015_38840210_38842882
ES.9031.6	chr13	-	930	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	-32	1655	-32	-1655	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGCTGTTTACTTTTTT	NA	False	NA	NA	False	AAAAAG	-17	NA	38843066	38829837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ES.9031.7	chr13	-	699	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	44	1810	-4	-1810	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTTCGTAATTTTT	NA	False	NA	NA	False	TTTAAA	-38	NA	38842990	38829992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ES.9031.8	chr13	-	541	2	FSM	ENSMUSG00000001707.9	ENSMUST00000224487.2	533	2	-8	0	-8	0	multi-exon	FALSE	canonical	3	1400	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAACAAGAGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	38842994	38839787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_38840217_38842882
ES.9032.1	chr13	+	4653	4	Antisense	novelGene_ENSMUSG00000114651.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCATTGGAGTATTTTT	NA	False	NA	NA	False	NA	NA	NA	38849182	38889763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_38849334_38877504_38877589_38883437_38883550_38885457
ES.9032.2	chr13	+	159	1	Intergenic	novelGene_7367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	38858687	38858846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_38858700_38858800
ES.9033.1	chr13	-	172	1	Intergenic	novelGene_7366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTTAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	38853782	38853610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38853600_38853800
ES.9034.1	chr13	-	3838	1	Intergenic	novelGene_7368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38926122	38922284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_38922300_38926100
ES.9035.1	chr13	-	1610	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-38	-770	-8	0	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAGGTGGGAAGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	39144521	39116115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
ES.9035.10	chr13	-	3558	9	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	0	-3	intron_retention	FALSE	canonical	3	16	junction_5	15.7950743904548	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144489	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
ES.9035.11	chr13	-	3424	8	NIC	ENSMUSG00000021432.16	novel	1701	10	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	39	junction_5	8.54280936441489	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144510	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
ES.9035.12	chr13	-	1441	9	NIC	ENSMUSG00000021432.16	novel	802	9	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	17.7552809045647	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144498	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144385
ES.9035.13	chr13	-	1595	9	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	8.40293847412915	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144502	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
ES.9035.14	chr13	-	1454	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-50	-602	-20	-3	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144533	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
ES.9035.15	chr13	-	1442	8	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	17.835987468587	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144471	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39139624_39139913_39144407
ES.9035.16	chr13	-	3340	7	NNC	ENSMUSG00000021432.16	novel	1701	10	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	1	junction_3	26.0042731531228	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39144506	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123822_39123949_39138084_39138207_39139624_39139913_39144407
ES.9035.17	chr13	-	1101	1	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	-7	-4703	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGGTTAAGAGATAAGG	NA	False	NA	NA	False	AATAGA	-41	NA	39144496	39143395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39143400_39144500
ES.9035.2	chr13	-	1786	9	NIC	ENSMUSG00000021432.16	novel	1778	10	NA	NA	-1	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	16.3205200591158	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATCAAGGTGGGAAG	NA	False	NA	NA	False	AATAAA	-12	NA	39144506	39116118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144385
ES.9035.3	chr13	-	1630	8	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	3	-3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	19.1065754254863	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATCAAGGTGGGAAG	NA	False	NA	NA	False	AATAAA	-12	NA	39144480	39116118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39138084_39138207_39139624_39139913_39144407
ES.9035.4	chr13	-	4141	8	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	3	-34	intron_retention	FALSE	canonical	3	39	junction_5	7.77751862218069	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	39144480	39116149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
ES.9035.5	chr13	-	2069	10	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	38	-34	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	18.1114519395333	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	39144418	39116149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144138
ES.9035.6	chr13	-	3709	9	NIC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	-1	-34	intron_retention	FALSE	canonical	3	16	junction_5	15.7950743904548	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	39144506	39116149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
ES.9035.7	chr13	-	5870	6	NIC	ENSMUSG00000021432.16	novel	821	7	NA	NA	-7	-34	intron_retention	FALSE	canonical	2	2	junction_3	21.3672646822189	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	39144496	39116149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39121330_39121722_39121816_39123850_39123949_39138084_39138207_39139624_39139913_39144407
ES.9035.8	chr13	-	1971	11	NNC	ENSMUSG00000021432.16	novel	2216	10	NA	NA	-7	-34	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.0111335464578	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTATTAATAAA	NA	False	NA	NA	False	AATAAA	-18	NA	39144496	39116149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39135745_39135839_39138084_39138207_39139624_39139913_39144407
ES.9035.9	chr13	-	3026	3	NIC	ENSMUSG00000021432.16	novel	1701	10	NA	NA	4846	-3	intron_retention	FALSE	canonical	0	0	junction_1	30.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	39122282	39116283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_39116893_39117431_39118784_39121217
ES.9036.1	chr13	+	186	1	Intergenic	novelGene_7369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAGAAAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	39575261	39575447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_39575300_39575400
ES.9037.1	chr13	+	2805	1	Intergenic	novelGene_7370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACATTCACATGGAAAC	NA	False	NA	NA	False	NA	NA	NA	40093152	40095957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_40093200_40096000
ES.9038.1	chr13	+	182	1	Intergenic	novelGene_7371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACATAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	40790506	40790688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_40790500_40790700
ES.9039.1	chr13	+	580	1	ISM	ENSMUSG00000055732.2	ENSMUST00000069457.2	3005	2	1453	1912	1453	-1912	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAATGTGCTAACACTG	NA	False	NA	NA	False	ATTAAA	-18	NA	40858933	40859513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_40858900_40859500
ES.904.1	chr1	+	2599	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	-18	1	-18	-1	multi-exon	FALSE	canonical	3	186	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTGCTTCCTTGGTCT	NA	False	NA	35	True	AATAAA	-26	NA	86230937	86235026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86231277_86232766
ES.904.2	chr1	+	3794	1	FSM	ENSMUSG00000079445.4	ENSMUST00000189618.2	1876	1	666	-2584	-33	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTGTCTGAATTAGCT	NA	False	NA	22	True	AATAAA	-13	NA	86231219	86235013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86231200_86235000
ES.904.3	chr1	+	2429	2	NNC	ENSMUSG00000079445.4	novel	1523	2	NA	NA	221	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAATTAGCTGCTTCC	NA	False	NA	28	True	AATAAA	-19	NA	86231473	86235019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86231650_86232766
ES.904.4	chr1	+	2580	2	FSM	ENSMUSG00000079445.4	ENSMUST00000188695.2	1523	2	391	-1448	391	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAATTAGCTGCTTCC	NA	False	NA	28	True	AATAAA	-19	NA	86231643	86235019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86231971_86232766
ES.904.5	chr1	+	2448	2	NNC	ENSMUSG00000079445.4	novel	1523	2	NA	NA	410	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTCTGAATTAGCTGC	NA	False	NA	24	True	AATAAA	-15	NA	86231662	86235015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86231862_86232766
ES.904.6	chr1	+	4702	1	Genic_Genomic	ENSMUSG00000079445.4	novel	NA	NA	NA	NA	1946	2873	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGAAAAAGTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	86233198	86237900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_86233200_86237900
ES.9040.1	chr13	-	661	4	Antisense	novelGene_ENSMUSG00000055732.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTCTTTGTCGCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	40868216	40858116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_40858491_40864617_40864722_40867304_40867393_40868121
ES.9041.1	chr13	-	2100	7	FSM	ENSMUSG00000021359.17	ENSMUST00000224665.2	1958	7	0	-142	0	15	multi-exon	FALSE	canonical	1	1	junction_6	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTTCTATGTCCTGTCT	5228	False	NA	NA	False	AATAAA	-16	NA	40887451	40870065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_40870880_40872667_40872810_40874744_40874864_40876566_40876799_40878604_40878657_40881817_40882253_40887145
ES.9041.2	chr13	-	2345	1	Antisense	novelGene_ENSMUSG00000097752.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGGAACTCCAAAACTT	NA	False	NA	NA	False	NA	NA	NA	40881295	40878950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_40879000_40881300
ES.9042.1	chr13	-	147	1	Intergenic	novelGene_7372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	40909094	40908947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_40908900_40909100
ES.9043.1	chr13	+	189	1	Intergenic	novelGene_7373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAAAGAAATCA	NA	False	NA	NA	False	NA	NA	NA	40915800	40915989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_40915800_40916000
ES.9044.1	chr13	+	209	1	Intergenic	novelGene_7374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGACCCCACCTCCAA	2493	False	NA	NA	False	NA	NA	NA	41003803	41004012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41003800_41004000
ES.9045.1	chr13	+	4208	3	FSM	ENSMUSG00000021360.17	ENSMUST00000110191.10	4352	3	153	-9	153	4	multi-exon	FALSE	canonical	3	38	junction_1	71.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGATATTTATTTGATA	NA	False	NA	24	True	AATAAA	-29	NA	41013382	41114372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41014750_41107051_41107148_41111627
ES.9045.10	chr13	+	4375	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	-445	-1	-445	0	multi-exon	FALSE	canonical	3	51	junction_1	65	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41040223	41114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41041762_41107051_41107148_41111627
ES.9045.11	chr13	+	4085	3	NNC	ENSMUSG00000021360.17	novel	3929	3	NA	NA	-389	2	intron_retention	FALSE	canonical	1	3	junction_1	89	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGGATATTTATTTGA	NA	False	NA	22	True	AATAAA	-27	NA	41040279	41114370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41041526_41107051_41107148_41111627
ES.9045.12	chr13	+	5167	4	NNC	ENSMUSG00000021360.17	novel	4038	3	NA	NA	-389	0	intron_retention	FALSE	canonical	0	0	junction_1	75.4644876010491	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41040279	41114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41041762_41071429_41072278_41107051_41107148_41111627
ES.9045.13	chr13	+	4095	4	NNC	ENSMUSG00000021360.17	novel	3929	3	NA	NA	39	2	intron_retention	FALSE	canonical	0	0	junction_1	85.0894953694181	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAATAGTGGATATTTA	NA	False	NA	17	True	AATAAA	-22	NA	41040707	41114365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41041762_41100074_41100282_41107051_41107148_41111627
ES.9045.14	chr13	+	158	1	Intergenic	novelGene_7379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	41069059	41069217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41069100_41069200
ES.9045.15	chr13	+	4052	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	-10	-4	-10	4	multi-exon	FALSE	canonical	3	123	junction_1	29	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGATATTTATTTGATA	NA	False	NA	24	True	AATAAA	-29	NA	41071066	41114372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41072278_41107051_41107148_41111627
ES.9045.16	chr13	+	1426	2	FSM	ENSMUSG00000021360.17	ENSMUST00000225759.2	1366	2	-30	-30	19	-1	multi-exon	FALSE	canonical	3	123	junction_1	0	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGAGTCTCTCCTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	41071095	41107295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41072278_41107051
ES.9045.17	chr13	+	4209	4	NNC	ENSMUSG00000021360.17	novel	4038	3	NA	NA	-14	0	intron_retention	FALSE	canonical	1	1	junction_2	84.6180963046453	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGTGGATATTTATT	NA	False	NA	19	True	AATAAA	-24	NA	41071111	41114367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41072278_41100074_41100282_41107051_41107148_41111627
ES.9045.19	chr13	+	3170	3	NNC	ENSMUSG00000021360.17	novel	334	2	NA	NA	-2609	1	intron_retention	FALSE	canonical	0	0	junction_1	90.5	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAATAGTGGATATTT	NA	False	NA	16	True	AATAAA	-21	NA	41097598	41114364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41097936_41107051_41107148_41111627
ES.9045.2	chr13	+	5009	4	NNC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	198	2	intron_retention	FALSE	canonical	0	0	junction_1	75.4644876010491	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTGGATATTTATTTGA	NA	False	NA	22	True	AATAAA	-27	NA	41013427	41114370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41014750_41071429_41072278_41107051_41107148_41111627
ES.9045.20	chr13	+	3268	4	NNC	ENSMUSG00000021360.17	novel	335	2	NA	NA	-2148	0	intron_retention	FALSE	canonical	0	0	junction_1	84.1704619606348	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41098059	41114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41098268_41100074_41100298_41107051_41107148_41111627
ES.9045.21	chr13	+	3301	1	NIC	ENSMUSG00000021360.17	novel	3929	3	NA	NA	4174	2	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGAATAGTGGATATTTA	NA	False	NA	17	True	AATAAA	-22	NA	41111064	41114365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41111100_41114400
ES.9045.3	chr13	+	4056	2	NIC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	204	0	intron_retention	FALSE	canonical	0	0	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGTGGATATTTATT	NA	False	NA	19	True	AATAAA	-24	NA	41013433	41114367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41014750_41111627
ES.9045.4	chr13	+	2895	3	NNC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	231	0	intron_retention	FALSE	canonical	0	0	junction_1	90.5	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41013460	41114368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41013519_41107051_41107148_41111627
ES.9045.5	chr13	+	3873	4	NNC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	340	0	intron_retention	FALSE	canonical	1	1	junction_1	77.6158632125046	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGTGGATATTTATT	NA	False	NA	19	True	AATAAA	-24	NA	41013569	41114367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41013762_41013904_41014750_41107051_41107148_41111627
ES.9045.7	chr13	+	1721	1	NIC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	381	-91934	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	41013610	41015331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41013600_41015300
ES.9045.8	chr13	+	4143	4	NNC	ENSMUSG00000021360.17	novel	4352	3	NA	NA	415	-1	intron_retention	FALSE	canonical	0	0	junction_1	85.0894953694181	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAGGAATAGTGGATAT	NA	False	NA	14	True	AATAAA	-19	NA	41013644	41114362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41014750_41100074_41100282_41107051_41107148_41111627
ES.9045.9	chr13	+	2646	1	FSM	ENSMUSG00000093269.3	ENSMUST00000175528.3	72	1	-624	-1950	-624	1950	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGGCTGGAAGACCG	2313	False	NA	NA	False	NA	NA	NA	41018642	41021288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41018600_41021300
ES.9046.1	chr13	-	718	4	Intergenic	novelGene_7375	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTGCTTTACCCGGC	1870	False	NA	NA	False	AATAAA	-17	NA	41034183	41013268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41013621_41015509_41015603_41016599_41016757_41034067
ES.9046.2	chr13	-	869	4	Genic_Genomic	ENSMUSG00000114672.2	novel	692	1	NA	NA	-6514	13705	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTGCTTTACCCGGC	1874	False	NA	NA	False	AATAAA	-17	NA	41034179	41013268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_41013621_41026264_41026420_41027610_41027861_41034067
ES.9046.3	chr13	-	5599	2	Genic_Genomic	ENSMUSG00000114672.2	novel	692	1	NA	NA	-2967	7091	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTTTGCTTACTGCCTT	5421	False	NA	NA	False	NA	NA	NA	41030632	41019882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_41020422_41025572
ES.9047.1	chr13	-	189	1	Intergenic	novelGene_7376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCACAAGGAAGTT	NA	False	NA	NA	False	NA	NA	NA	41042120	41041931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41041900_41042100
ES.9048.1	chr13	-	3504	1	Intergenic	novelGene_7377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCTCTCGCAAACTAA	NA	False	NA	NA	False	NA	NA	NA	41054137	41050633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41050600_41054100
ES.9049.1	chr13	-	185	1	Intergenic	novelGene_7378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTTTTTTTGGG	9567	False	NA	NA	False	NA	NA	NA	41068489	41068304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41068300_41068500
ES.905.1	chr1	+	192	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTGATGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	86256954	86257146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86257000_86257100
ES.9050.1	chr13	-	765	1	Antisense	novelGene_ENSMUSG00000021360.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAACCAAACAAACAAAGC	9499	False	NA	NA	False	AAAACA	-45	NA	41100774	41100009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_41100000_41100800
ES.9051.1	chr13	-	2326	5	Intergenic	novelGene_7380	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	3.278719262151	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAATCACAAAAG	NA	False	NA	NA	False	AATAAA	-27	NA	41123189	41113852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41114667_41117759_41118929_41119632_41119778_41122513_41122647_41123124
ES.9052.1	chr13	-	2768	2	Intergenic	novelGene_7381	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATACATGAGAAATA	1258	False	NA	NA	False	NA	NA	NA	41135832	41128201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41130868_41135730
ES.9053.1	chr13	-	219	1	Intergenic	novelGene_7382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACATTGTACAAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	41152164	41151945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41151900_41152200
ES.9054.1	chr13	+	1830	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	-58	-50	-58	50	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCGCATGTGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	41154440	41166541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ES.9054.10	chr13	+	1757	9	FSM	ENSMUSG00000038683.17	ENSMUST00000174472.3	1757	9	-6	6	0	0	multi-exon	FALSE	canonical	3	613	junction_2	42.5147033389626	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154735	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ES.9054.12	chr13	+	2283	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	238	-799	1	799	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	41154736	41167290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ES.9054.14	chr13	+	1554	9	NIC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	605	junction_5	45.6042761152943	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154741	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41163022_41164658_41164759_41165809_41165934_41166040
ES.9054.15	chr13	+	3646	5	NIC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	6	0	intron_retention	FALSE	canonical	3	613	junction_2	24.7032386540712	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154747	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361_41164759_41165809
ES.9054.16	chr13	+	3168	8	NIC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	23	0	intron_retention	FALSE	canonical	3	605	junction_5	48.6457414710199	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154764	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41164759_41165809_41165934_41166040
ES.9054.17	chr13	+	3166	8	NNC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	38	0	intron_retention	FALSE	canonical	0	0	junction_5	234.167043115876	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154779	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361_41162415_41162694_41162841_41162901_41164759_41165809_41165934_41166040
ES.9054.18	chr13	+	3692	1	NIC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	3635	-25	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCAAAAAAGAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	41158376	41162068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41158400_41162100
ES.9054.3	chr13	+	3703	4	NIC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	-6	-1249	intron_retention	FALSE	canonical	3	613	junction_2	28.5228952870419	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41154492	41165234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361
ES.9054.4	chr13	+	3435	8	NNC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	-6	0	intron_retention	FALSE	canonical	0	0	junction_6	233.969298526668	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154492	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361_41162415_41162694_41162841_41162923_41164763_41165809_41165934_41166040
ES.9054.5	chr13	+	4295	3	FSM	ENSMUSG00000038683.17	ENSMUST00000173238.8	1155	3	1	-3141	1	-1249	multi-exon	FALSE	canonical	3	613	junction_2	34.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41154500	41165234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41154890_41158212_41158376_41161491
ES.9054.6	chr13	+	1607	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	21	94	20	-86	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCATTTTATTATAGA	NA	False	NA	NA	False	GATAAA	-13	NA	41154519	41166397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ES.9054.8	chr13	+	3565	6	NIC	ENSMUSG00000038683.17	novel	3136	9	NA	NA	10	2	intron_retention	FALSE	canonical	3	613	junction_2	48.7007186805287	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATACAGAGCTTAATTAC	NA	False	NA	NA	False	AGTAAA	-22	NA	41154723	41166485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361_41164759_41165809_41165934_41166040
ES.9054.9	chr13	+	1560	9	NIC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	-9	0	intron_retention	FALSE	canonical	3	605	junction_4	43.5832536646818	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	False	NA	NA	False	AGTAAA	-20	NA	41154726	41166483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41154890_41158212_41158376_41161491_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ES.9055.1	chr13	+	937	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	-28	5	-28	-5	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCTGGTGTCGTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	41169739	41176057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ES.9055.2	chr13	+	873	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	-23	-5	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCTGGTGTCGTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	41169744	41176057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ES.9055.3	chr13	+	1010	6	NNC	ENSMUSG00000021361.8	novel	914	6	NA	NA	-12	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	268.998438657179	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACACTTCTCTGGTGTC	NA	False	NA	4	True	AATAAA	-11	NA	41169755	41176051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41169875_41170590_41170745_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ES.9055.5	chr13	+	803	5	ISM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	822	5	822	-5	3prime_fragment	FALSE	canonical	3	613	junction_1	47.0611304581605	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTCTGGTGTCGTCTTT	NA	False	NA	10	True	AATAAA	-17	NA	41170589	41176057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ES.9055.6	chr13	+	921	1	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	5363	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACACTTCTCTGGTGTC	NA	False	NA	4	True	AATAAA	-11	NA	41175130	41176051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41175100_41176100
ES.9056.1	chr13	-	2052	1	Antisense	novelGene_ENSMUSG00000021361.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	9602	False	NA	NA	False	NA	NA	NA	41173487	41171435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_41171400_41173500
ES.9057.1	chr13	+	1926	1	Antisense	novelGene_ENSMUSG00000021363.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41204306	41206232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_41204300_41206200
ES.9058.1	chr13	+	209	1	Intergenic	novelGene_7383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATCAGACTTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	41222959	41223168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41223000_41223200
ES.9059.1	chr13	-	3532	13	NIC	ENSMUSG00000021363.15	novel	3562	15	NA	NA	-52	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.20321734440038	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTTGTGGTTGTTTGTT	1865	False	NA	NA	False	ATTAAA	-20	NA	41233234	41178482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41233077
ES.9059.2	chr13	-	3456	14	NNC	ENSMUSG00000021363.15	novel	3562	15	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5903781908435	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCGTTGTGGTTGTTTGT	2005	False	NA	NA	False	ATTAAA	-19	NA	41233094	41178483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41199984_41200050_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41233077
ES.9059.3	chr13	-	3641	14	NIC	ENSMUSG00000021363.15	novel	3573	14	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	1.96718643885299	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCGTTGTGGTTGTTTGT	2016	False	NA	NA	False	ATTAAA	-19	NA	41233083	41178483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41180039_41183492_41183613_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41232936
ES.9059.4	chr13	-	3521	13	NIC	ENSMUSG00000021363.15	novel	3562	15	NA	NA	34	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.27303028283098	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCGTTGTGGTTGTTTG	2015	False	NA	NA	False	ATTAAA	-18	NA	41233084	41178484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41232936
ES.9059.5	chr13	-	3203	13	NIC	ENSMUSG00000021363.15	novel	3562	15	NA	NA	2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	2.27303028283098	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTCGTTGTGGTTGTTTG	1983	False	NA	NA	False	ATTAAA	-18	NA	41233116	41178484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41180039_41183492_41183613_41188229_41188362_41193104_41193254_41195494_41195662_41199494_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41233077
ES.906.1	chr1	+	4345	1	Antisense	novelGene_ENSMUSG00000026234.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTGGTCTTTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	86271414	86275759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_86271400_86275800
ES.906.2	chr1	+	3408	1	Antisense	novelGene_ENSMUSG00000026234.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGACACCTGAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	86271668	86275076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_86271700_86275100
ES.9060.1	chr13	-	4099	4	ISM	ENSMUSG00000021362.8	ENSMUST00000021791.8	3073	5	4301	-1364	-199	1363	3prime_fragment	FALSE	canonical	3	9	junction_3	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	41259358	41253539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_41257166_41258044_41258171_41258886_41259000_41259124
ES.9060.2	chr13	-	2723	4	ISM	ENSMUSG00000021362.8	ENSMUST00000021791.8	3073	5	4314	-1	-186	0	3prime_fragment	FALSE	canonical	3	9	junction_3	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAATCTCTTCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	41259345	41254902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_41257166_41258044_41258171_41258886_41259000_41259124
ES.9061.1	chr13	+	5085	30	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	13396	-1	multi-exon	FALSE	canonical	0	0	junction_1	12.9544156433672	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTAGTGTGGTTAATT	NA	False	NA	3	True	AATAAA	-15	NA	41281178	41332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41282988_41283248_41283338_41287429_41287465_41288547_41288691_41291373_41291427_41292142_41292189_41295183_41295277_41295380_41295442_41296923_41297070_41299501_41299596_41300030_41300150_41302269_41302328_41302410_41302490_41303608_41303750_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41310330_41310402_41310909_41310994_41311161_41311265_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.10	chr13	+	2261	17	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2302	-2	multi-exon	FALSE	canonical	3	6	junction_7	9.00498993614096	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTTAGTGTGGTTAAT	NA	False	NA	2	True	AATAAA	-14	NA	41299969	41332504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.12	chr13	+	5853	15	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2302	3795	multi-exon	FALSE	canonical	0	0	junction_1	10.8855361815201	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTTTCTATGCTTAAT	NA	False	NA	NA	False	TATAAA	-17	NA	41299969	41336301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300127_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.13	chr13	+	4324	14	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2302	-614	intron_retention	FALSE	canonical	3	12	junction_3	8.73068451331314	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGTGGCTTACTTCTC	NA	False	NA	40	True	AATAGA	-22	NA	41299969	41331892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.14	chr13	+	1519	11	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	662	6	NA	NA	-395	-83	multi-exon	FALSE	canonical	0	0	junction_1	11.838918869559	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATATGCTTTAGTGC	NA	False	NA	-79	True	AATATA	-44	NA	41306468	41332423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306501_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.15	chr13	+	1797	12	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	662	6	NA	NA	-198	-1	multi-exon	FALSE	canonical	0	0	junction_1	10.7318942279081	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTAGTGTGGTTAATT	NA	False	NA	3	True	AATAAA	-15	NA	41306665	41332505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306721_41306906_41306957_41308994_41309122_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327824_41330358_41330421_41331657
ES.9061.16	chr13	+	1692	10	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	906	2	NA	NA	-110	-8	multi-exon	FALSE	canonical	0	0	junction_1	12.0871322253088	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGATCAGTTAGTGTG	NA	False	NA	-4	True	AATAAA	-8	NA	41306753	41332498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306822_41308994_41309122_41316524_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327824_41330358_41330421_41331657
ES.9061.17	chr13	+	4097	13	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-9	2222	multi-exon	FALSE	canonical	2	2	junction_3	11.2977382200549	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGTCTCCCATAGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	41306854	41334728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306957_41308994_41309122_41310330_41310402_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.18	chr13	+	6206	8	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	906	2	NA	NA	5	2218	multi-exon	FALSE	canonical	1	2	junction_2	10.8289106618556	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTAATGTCTCCCATA	NA	False	NA	NA	False	AATAAA	-16	NA	41306868	41334724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306957_41308994_41309122_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41330421_41331657
ES.9061.19	chr13	+	1561	10	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	906	2	NA	NA	7	-2	multi-exon	FALSE	canonical	2	6	junction_1	10.6608780589431	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTTAGTGTGGTTAAT	NA	False	NA	2	True	AATAAA	-14	NA	41306870	41332504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41306957_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.2	chr13	+	2499	20	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-13668	-2	multi-exon	FALSE	canonical	0	0	junction_3	12.4617975786789	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTTAGTGTGGTTAAT	NA	False	NA	2	True	AATAAA	-14	NA	41288603	41332504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41288691_41295183_41295277_41295380_41295442_41296923_41297070_41299501_41299596_41300030_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.20	chr13	+	622	6	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	906	2	NA	NA	-5409	-619	multi-exon	FALSE	canonical	3	10	junction_2	10.3807514178888	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATTCCAAGTGGCTTAC	NA	False	NA	35	True	AATAGA	-17	NA	41324954	41331887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.3	chr13	+	1549	1	Intergenic	novelGene_7384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41288973	41290522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41289000_41290500
ES.9061.4	chr13	+	7184	13	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2840	2221	intron_retention	FALSE	canonical	0	0	junction_4	10.1393074495034	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGTCTCCCATAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	41299431	41334727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41306501_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327824_41330358_41330421_41331657
ES.9061.5	chr13	+	4397	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2320	2221	multi-exon	FALSE	canonical	0	0	junction_1	10.2623367492767	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGTCTCCCATAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	41299951	41334727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300129_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.6	chr13	+	2065	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2316	-114	multi-exon	FALSE	canonical	3	6	junction_7	9.58239125804317	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTTGATGGATTTTT	NA	False	NA	NA	False	AATATA	-13	NA	41299955	41332392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.7	chr13	+	4387	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2303	2221	multi-exon	FALSE	canonical	3	6	junction_7	9.58239125804317	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGTCTCCCATAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	41299968	41334727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306957_41308994_41309122_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.8	chr13	+	4342	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2303	2221	multi-exon	FALSE	canonical	0	0	junction_5	10.6508215645555	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAATGTCTCCCATAGGC	NA	False	NA	NA	False	AATAAA	-19	NA	41299968	41334727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306295_41306906_41306957_41310909_41310994_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9061.9	chr13	+	2175	16	Fusion	ENSMUSG00000038651.16_ENSMUSG00000114388.2	novel	2641	29	NA	NA	-2302	-8	multi-exon	FALSE	canonical	0	0	junction_6	10.1377183494775	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGGATCAGTTAGTGTG	NA	False	NA	-4	True	AATAAA	-8	NA	41299969	41332498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_41300150_41302269_41302328_41302410_41302490_41303953_41304003_41306165_41306311_41306906_41306961_41308994_41309122_41316547_41316622_41316769_41316840_41324946_41325022_41326119_41326224_41327290_41327389_41327673_41327774_41327873_41327933_41330358_41330421_41331657
ES.9062.1	chr13	+	5299	1	Intergenic	novelGene_7385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	AAAAAG	-36	NA	41365260	41370559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41365300_41370600
ES.9063.1	chr13	-	3876	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-34	-2	-34	2	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATTCTTAATTCATT	7525	False	NA	NA	False	AATAAA	-20	NA	41373915	41335854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9063.10	chr13	-	3661	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	18	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.55536668924	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACATCTTGCAACTTT	7577	False	NA	NA	False	AATAAA	-13	NA	41373863	41335976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41337641_41337675_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350669_41373830
ES.9063.11	chr13	-	2529	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	1	1310	1	-1192	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACCCTTCTCACTGGTG	7560	False	NA	NA	False	TTTAAA	-11	NA	41373880	41337166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9063.2	chr13	-	3895	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	-169	114	-169	4	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7390	False	NA	NA	False	AATAAA	-19	NA	41374050	41335970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9063.3	chr13	-	3874	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-43	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	27.1635670522117	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7516	False	NA	NA	False	AATAAA	-19	NA	41373924	41335970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41350742_41350848_41373830
ES.9063.4	chr13	-	3719	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-40	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.2746180929294	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7519	False	NA	NA	False	AATAAA	-19	NA	41373921	41335970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41338035_41338081_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9063.6	chr13	-	4010	8	FSM	ENSMUSG00000021364.17	ENSMUST00000117096.2	3797	8	-209	-4	34	4	multi-exon	FALSE	canonical	1	1	junction_7	22.3533771360785	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7593	False	NA	NA	False	AATAAA	-19	NA	41373847	41335970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373512
ES.9063.7	chr13	-	5208	7	NIC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	-37	4	intron_retention	FALSE	canonical	3	52	junction_3	8.28653526310404	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCAACTTTTCTTAT	7522	False	NA	NA	False	AATAAA	-19	NA	41373918	41335970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9063.8	chr13	-	3686	9	NNC	ENSMUSG00000021364.17	novel	3840	8	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.2746180929294	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTTGCAACTTTTC	7560	False	NA	NA	False	AATAAA	-15	NA	41373880	41335974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41337645_41337679_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ES.9064.1	chr13	+	4563	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	-80	0	-80	0	multi-exon	FALSE	canonical	3	181	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGCCTCATTGGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	41403239	41430053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41403791_41426041
ES.9064.2	chr13	+	4204	3	NNC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	305	3267	intron_retention	TRUE	non_canonical	0	0	junction_2	90.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATGTGAGCCACTA	NA	False	NA	NA	False	NA	NA	NA	41403624	41433320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41403791_41426041_41430051_41433291
ES.9064.3	chr13	+	520	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	320	3643	320	-3643	multi-exon	FALSE	canonical	3	181	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGGCCATTGCAGATT	NA	False	NA	4	True	AATAAA	-14	NA	41403639	41426410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41403791_41426041
ES.9064.4	chr13	+	597	1	NIC	ENSMUSG00000091264.4	novel	4483	2	NA	NA	322	-25815	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41403641	41404238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_41403600_41404200
ES.9065.1	chr13	-	1617	1	Intergenic	novelGene_7386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41407828	41406211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41406200_41407800
ES.9066.1	chr13	-	177	1	Intergenic	novelGene_7387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATGTCAACACA	5885	False	NA	NA	False	NA	NA	NA	41420118	41419941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41419900_41420100
ES.9067.1	chr13	-	167	1	Intergenic	novelGene_7388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGCAAGCTGAGCAAA	777	False	NA	NA	False	NA	NA	NA	41425226	41425059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41425100_41425200
ES.9068.1	chr13	-	4315	7	FSM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	252	59	252	-59	multi-exon	FALSE	canonical	1	1	junction_3	1.46249406456535	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTTCTTTTCCTTGTG	NA	False	NA	NA	False	ATTAAA	-27	NA	41512471	41463454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41465647_41467841_41467932_41469249_41470492_41471337_41471440_41471919_41472022_41492052_41492497_41512328
ES.9068.2	chr13	-	171	1	Intergenic	novelGene_7389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTTAATTTGACC	NA	False	NA	NA	False	NA	NA	NA	41488928	41488757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41488800_41488900
ES.9069.1	chr13	-	187	1	Intergenic	novelGene_7390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGTAGATAAAC	NA	False	NA	NA	False	NA	NA	NA	41701362	41701175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_41701200_41701400
ES.907.1	chr1	+	286	1	FSM	ENSMUSG00000073627.8	ENSMUST00000190804.2	3185	1	88	2811	88	-2811	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGCAGTGCACAAGCGAT	NA	False	NA	NA	False	AATAAA	-24	NA	86287397	86287683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86287400_86287700
ES.9070.1	chr13	+	7556	3	FSM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	-388	0	-79	0	multi-exon	FALSE	canonical	3	21	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	41759303	41794831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41759789_41781453_41781625_41787931
ES.9070.2	chr13	+	2968	3	NNC	ENSMUSG00000087370.4	novel	7168	3	NA	NA	-57	2184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTATATATCTATT	NA	False	NA	NA	False	NA	NA	NA	41759325	41790311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_41759743_41781453_41781625_41787931
ES.9070.3	chr13	+	7362	2	FSM	ENSMUSG00000087370.4	ENSMUST00000221694.2	602	2	-56	-6704	-56	0	multi-exon	FALSE	canonical	2	6	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	41759326	41794831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_41759789_41787931
ES.9070.4	chr13	+	1929	1	Genic_Genomic	ENSMUSG00000087370.4	novel	NA	NA	NA	NA	-46	-26862	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACCACTGTACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	41759336	41761265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_41759300_41761300
ES.9071.1	chr13	-	3903	3	Antisense	novelGene_ENSMUSG00000087370.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGCTCCTCGGCCCCGCC	9493	False	NA	NA	False	NA	NA	NA	41791181	41759306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_41759788_41781452_41781625_41787931
ES.9071.2	chr13	-	2858	1	Antisense	novelGene_ENSMUSG00000087370.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTGAAGGCTTAGAAAA	6968	False	NA	NA	False	NA	NA	NA	41793706	41790848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_41790800_41793700
ES.9072.1	chr13	+	741	2	Intergenic	novelGene_7391	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTCTGGTGTCCGTGG	NA	False	NA	NA	False	NA	NA	NA	41894784	41901072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_41894875_41900421
ES.9073.1	chr13	-	1112	7	FSM	ENSMUSG00000058022.15	ENSMUST00000121404.8	1602	7	68	422	0	3	multi-exon	FALSE	canonical	3	17	junction_6	3.97562014729219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCTCCTGTTACTTTT	NA	False	NA	0	True	TATAAA	-39	NA	42001092	41918030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_41981618_41981862_42000966
ES.9073.2	chr13	-	850	6	NIC	ENSMUSG00000058022.15	novel	1602	7	NA	NA	-10	0	intron_retention	FALSE	canonical	1	2	junction_5	9.2217135067188	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGGATCTCCTGGTTTT	NA	False	NA	-29	True	AATAAA	-19	NA	42001102	41918059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_41918269_41920811_41920964_41930983_41931100_41967690_41967793_41969613_41969749_42000966
ES.9073.3	chr13	-	2099	5	NNC	ENSMUSG00000058022.15	novel	352	2	NA	NA	13	9996	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.21583836257749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCAGTCTTGACTCTA	NA	False	NA	NA	False	ATTAAA	-24	NA	42001079	41957707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_41959214_41967690_41967793_41969613_41969749_41981618_41981862_42000966
ES.9073.4	chr13	-	4006	1	Antisense	novelGene_ENSMUSG00000099672.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAAGACAAACTCTTGT	NA	False	NA	NA	False	AATAAA	-11	NA	41998250	41994244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_41994200_41998200
ES.9074.1	chr13	+	158	1	Intergenic	novelGene_7392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	42137057	42137215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_42137100_42137200
ES.9075.1	chr13	+	7384	8	ISM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	-161	2990	-161	126	5prime_fragment	FALSE	canonical	1	3	junction_2	8.61417910381791	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTGTACCTTCTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	42205335	42335512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907
ES.9075.2	chr13	+	8904	9	FSM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	-148	-3	-148	3	multi-exon	FALSE	canonical	1	3	junction_2	8.24526379202024	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGCTTACGTCTCGTG	NA	False	NA	5	True	AGTAAA	-18	NA	42205348	42338505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
ES.9075.3	chr13	+	8831	10	NIC	ENSMUSG00000021366.9	novel	8753	9	NA	NA	-5	4	intron_retention	FALSE	canonical	0	0	junction_7	9.14087280053473	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTTACGTCTCGTGC	NA	False	NA	6	True	AGTAAA	-19	NA	42205491	42338506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42322716_42322786_42334907_42335408_42336867
ES.9075.4	chr13	+	8841	9	NIC	ENSMUSG00000021366.9	novel	501	4	NA	NA	-108	-2	intron_retention	FALSE	canonical	1	1	junction_1	8.76070773396762	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTACTGGTGCTTACGTC	NA	False	NA	0	True	AGTAAA	-13	NA	42205771	42338500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_42205932_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
ES.9075.5	chr13	+	8491	8	ISM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	3375	196	2992	-196	3prime_fragment	FALSE	canonical	1	3	junction_1	7.75386671149252	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATATGTTGCACTGTTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	42208871	42338306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
ES.9075.6	chr13	+	7303	5	NIC	ENSMUSG00000021366.9	novel	8753	9	NA	NA	-829	10	intron_retention	FALSE	canonical	3	19	junction_4	2.1650635094611	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGTCTCGTGCTGTCTT	2503	False	NA	12	True	AGTAAA	-25	NA	42309780	42338512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_42313795_42316826_42317869_42321037_42321140_42334907_42335408_42336867
ES.9076.1	chr13	-	1653	1	Antisense	novelGene_ENSMUSG00000100071.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGCTCCCAAGCTTC	NA	False	NA	NA	False	NA	NA	NA	42204466	42202813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_42202800_42204500
ES.9076.2	chr13	-	1808	4	Antisense	novelGene_ENSMUSG00000021366.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTGCTCCCAAGCTT	NA	False	NA	NA	False	NA	NA	NA	42309425	42202814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_42202855_42208874_42209017_42276633_42276688_42307853
ES.9076.3	chr13	-	3124	1	Intergenic	novelGene_7393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAGGAGCTATGGATCC	9612	False	NA	NA	False	AAGAAA	-42	NA	42236152	42233028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_42233000_42236200
ES.9076.4	chr13	-	176	1	Intergenic	novelGene_7394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTATCATTTGAA	NA	False	NA	NA	False	NA	NA	NA	42260947	42260771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_42260800_42260900
ES.9077.1	chr13	+	312	2	Intergenic	novelGene_7395	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTCAGTGGTTCTC	4005	False	NA	NA	False	AATAAA	-6	NA	42749702	42750124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_42749784_42749893
ES.9077.2	chr13	+	170	2	Intergenic	novelGene_7396	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTGAGTGAACAGAGTT	4006	False	NA	NA	False	NA	NA	NA	42749703	42749980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_42749731_42749837
ES.9077.3	chr13	+	317	2	Intergenic	novelGene_7397	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTCAGTGGTTCTCAAC	4006	False	NA	NA	False	AATAAA	-9	NA	42749703	42750127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_42749731_42749837
ES.9078.1	chr13	+	3782	6	NNC	ENSMUSG00000054728.18	novel	870	6	NA	NA	-356	-29	intron_retention	FALSE	canonical	0	0	junction_1	3.96988664825584	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACCAAAAAAAAA	NA	False	NA	-18	True	TTTAAA	-37	NA	43275976	43291960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43276112_43276474_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
ES.9078.2	chr13	+	4130	5	FSM	ENSMUSG00000054728.18	ENSMUST00000136576.8	716	5	-299	-3115	-299	0	multi-exon	FALSE	canonical	3	6	junction_4	2.29128784747792	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGACTCCTGTGTTGTT	NA	False	NA	24	True	NA	NA	NA	43276033	43292002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
ES.9079.1	chr13	+	4868	2	Antisense	novelGene_ENSMUSG00000021368.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	43316607	43321514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_43317202_43317240
ES.908.1	chr1	-	3090	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-633	14850	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1992.83916018512	3476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGTGAGTGAAATGGTTG	NA	False	NA	NA	False	NA	NA	NA	86287755	86257590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86257624_86278218_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.10	chr1	-	4302	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	-189	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1992.83916018512	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGACAGCCTGTGTTT	NA	False	NA	-9	True	AGTAAA	-14	NA	86287084	86272629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86272874_86276546_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.101	chr1	-	1036	5	NNC	ENSMUSG00000026234.13	novel	3072	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2618.56076881939	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287084	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278401_86284380_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.102	chr1	-	950	5	NNC	ENSMUSG00000026234.13	novel	3072	12	NA	NA	768	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2902.82271031147	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86285923	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278611_86284382_86284464_86284678_86285175_86285828
ES.908.104	chr1	-	2294	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	1992.83916018512	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287108	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86284730_86284846_86285175_86285828_86285946_86286927
ES.908.106	chr1	-	2839	12	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-4	0	intron_retention	FALSE	canonical	3	5685	junction_11	915.72028281765	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287090	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.107	chr1	-	2284	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2064.26858545573	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287090	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285066_86285828_86285946_86286927
ES.908.108	chr1	-	2127	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-72	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	2687.15501432387	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86286763	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284449_86284813_86285175_86285828_86285946_86286716
ES.908.109	chr1	-	2189	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2068.03757419541	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287084	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284876_86285175_86285828_86285946_86286927
ES.908.11	chr1	-	7765	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	399	2	-399	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTATTCTATCAT	NA	False	NA	NA	False	NA	NA	NA	86287084	86272839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.110	chr1	-	2381	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1921.62527364408	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287084	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280031_86280226_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.111	chr1	-	2376	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2068.03757419541	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGACTTAATACTTC	NA	False	NA	29	True	AGTAAA	-14	NA	86287080	86278218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284458_86284678_86285175_86285828_86285946_86286927
ES.908.112	chr1	-	2408	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2044.27758105458	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGACTTAATACTTC	NA	False	NA	29	True	AGTAAA	-14	NA	86287099	86278218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280840_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.116	chr1	-	2415	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2062.99910654597	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGACTTAATACTTC	NA	False	NA	29	True	AGTAAA	-14	NA	86287108	86278218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86280999_86281444_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.117	chr1	-	2903	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2057.09140614958	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAGACTTAATACTTC	NA	False	NA	29	True	AGTAAA	-14	NA	86286712	86278218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86286196_86286288
ES.908.119	chr1	-	1957	12	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	1515	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	2230.5421013995	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGACTTAATACTT	NA	False	NA	28	True	AGTAAA	-13	NA	86285176	86278219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284357_86284727
ES.908.12	chr1	-	2600	4	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-11	-412	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2754.38563426079	3467	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGATAATCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	86287097	86272852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86274984_86284992_86285175_86285828_86285946_86286927
ES.908.121	chr1	-	2379	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	117	junction_9	2039.97149301349	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGACTTAATACTT	NA	False	NA	28	True	AGTAAA	-13	NA	86287084	86278219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283910_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.125	chr1	-	2370	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2064.26858545573	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGACTTAATACTT	NA	False	NA	28	True	AGTAAA	-13	NA	86287084	86278219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285167_86285835_86285946_86286927
ES.908.126	chr1	-	2398	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2051.20369337518	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCCAGACTTAATACTT	NA	False	NA	28	True	AGTAAA	-13	NA	86287090	86278219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279912_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.127	chr1	-	2573	13	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	-4	intron_retention	FALSE	canonical	3	5685	junction_12	712.503489270209	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTGCCAGACTTAATAC	NA	False	NA	26	True	AGTAAA	-11	NA	86287084	86278221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.128	chr1	-	2169	13	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2152.4807909841	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGTTGCCAGACTTA	NA	False	NA	22	True	AGTAAA	-7	NA	86287084	86278225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284702_86285175_86285828_86285946_86286927
ES.908.129	chr1	-	1280	7	ISM	ENSMUSG00000026234.13	ENSMUST00000185676.7	3072	12	2	4555	2	2262	5prime_fragment	FALSE	canonical	3	5685	junction_6	279.846187912019	3180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCAAAAGGAAGAGAT	NA	False	NA	-13	True	ATTAAA	-5	NA	86287084	86282771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.13	chr1	-	3583	4	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-2830	-412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3241.18418003187	3463	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGATAATCTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	86282858	86272852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86276131_86280938_86281003_86281453_86281578_86282741
ES.908.130	chr1	-	1143	6	ISM	ENSMUSG00000026234.13	ENSMUST00000185676.7	3072	12	-11	5612	-11	1205	5prime_fragment	FALSE	canonical	3	5685	junction_5	287.107923958918	3153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTTGCTAAAAATGAT	NA	False	NA	-49	True	ATTAAA	-15	NA	86287097	86283828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.131	chr1	-	809	4	ISM	ENSMUSG00000026234.13	ENSMUST00000185676.7	3072	12	2	6208	2	609	5prime_fragment	FALSE	canonical	3	5685	junction_3	287.020324483592	3063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACTCCTGCAAAA	NA	False	NA	-81	True	NA	NA	NA	86287084	86284424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.14	chr1	-	6818	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	3	1381	3	-1381	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTCTATCTGGTA	NA	False	NA	NA	False	ACTAAA	-20	NA	86287119	86273821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.15	chr1	-	6646	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	25	1531	-11	-1531	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGATTTTATGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	86287097	86273971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.17	chr1	-	6294	13	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	1198	1692	767	-1692	3prime_fragment	FALSE	canonical	3	5903	junction_8	890.005816928556	3461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAACCCCAGTTCACTTC	NA	False	NA	NA	False	NA	NA	NA	86285924	86274132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828
ES.908.2	chr1	-	2295	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-30	14850	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2560.82363285163	3476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGTGAGTGAAATGGTTG	NA	False	NA	NA	False	NA	NA	NA	86286721	86257590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86257624_86278218_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286688
ES.908.20	chr1	-	6033	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	24	2145	-12	-2145	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCATTAGTATTTGG	NA	False	NA	-11	True	NA	NA	NA	86287098	86274585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.21	chr1	-	5297	12	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	1952	-2146	at_least_one_novel_splicesite	FALSE	canonical	1	68	junction_10	2212.69774761806	3458	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGCATTAGTATTTG	NA	False	NA	-12	True	NA	NA	NA	86284739	86274586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284168_86284277_86284464_86284678
ES.908.25	chr1	-	5929	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-18	2291	-18	-2291	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGCTGAGTCATCTCT	NA	False	NA	NA	False	NA	NA	NA	86287140	86274731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.26	chr1	-	5505	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-8	2705	-8	-2705	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTGGATTCTAGTT	NA	False	NA	-15	True	NA	NA	NA	86287130	86275145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.27	chr1	-	5363	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	26	2813	-10	-2813	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCAAATACGGCCTTTC	NA	False	NA	NA	False	NA	NA	NA	86287096	86275253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.28	chr1	-	4507	12	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	2416	2915	1985	2861	3prime_fragment	FALSE	canonical	3	5903	junction_8	870.888621888894	3455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATTGTCTTTGAAATTA	NA	False	NA	NA	False	NA	NA	NA	86284706	86275355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678
ES.908.29	chr1	-	2402	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	2801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1992.83916018512	3453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGTTTATTGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	86287084	86275415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86275432_86278218_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.3	chr1	-	172	1	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAACAACCAAA	NA	False	NA	NA	False	NA	NA	NA	86259163	86258991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86259000_86259200
ES.908.30	chr1	-	2336	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-90	2801	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2591.41575146459	3453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGTTTATTGGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	86286781	86275415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86275442_86278202_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286716
ES.908.31	chr1	-	4839	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	3325	2	2451	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTCTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86287084	86275765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.32	chr1	-	4564	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-6	2182	at_least_one_novel_splicesite	FALSE	canonical	1	54	junction_13	2044.0128851248	3442	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGCCTACTAAATGAT	NA	False	NA	NA	False	AGTAAA	-25	NA	86286697	86276034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286546
ES.908.33	chr1	-	4568	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	3596	2	2180	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTGCCTACTAAATG	NA	False	NA	NA	False	AGTAAA	-23	NA	86287084	86276036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.34	chr1	-	3602	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	4562	2	1214	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTGAAGGCACTCAGCT	NA	False	NA	NA	False	NA	NA	NA	86287084	86277002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.35	chr1	-	3447	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-58	4813	-58	963	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCCCAACAAACTGATTT	NA	False	NA	87	True	AATAGA	-30	NA	86287180	86277253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.36	chr1	-	3376	13	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-5	866	intron_retention	FALSE	canonical	3	5685	junction_12	952.613014584388	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTTGGTTTTTTTGTT	NA	False	NA	-10	True	AATGAA	-20	NA	86287091	86277350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.38	chr1	-	3527	14	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-27	866	combination_of_known_junctions	FALSE	canonical	3	382	junction_13	1964.96669047456	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTTGGTTTTTTTGTT	NA	False	NA	-10	True	AATGAA	-20	NA	86286718	86277350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286288
ES.908.4	chr1	-	156	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAAAAAAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86268913	86268757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86268800_86268900
ES.908.43	chr1	-	3847	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-559	4914	-559	862	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGATGTTTGGTTTTTT	NA	False	NA	-14	True	AATACA	-44	NA	86287681	86277354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.45	chr1	-	3128	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-61	861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2057.09140614958	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGATGTTTGGTTTTT	NA	False	NA	-15	True	AATACA	-43	NA	86286752	86277355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286716
ES.908.46	chr1	-	3098	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	38	5066	2	710	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAGAGAAGCTTTGG	NA	False	NA	NA	False	NA	NA	NA	86287084	86277506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.47	chr1	-	2832	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-38	556	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2623.1535450122	3415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTCAGCAGCAAGCTGG	NA	False	NA	NA	False	AATACA	-22	NA	86286729	86277660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280843_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286688
ES.908.48	chr1	-	2947	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	31	5224	-5	552	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGTCTCAGCAGCAAG	NA	False	NA	NA	False	AATACA	-18	NA	86287091	86277664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.5	chr1	-	3981	1	Genic_Genomic	ENSMUSG00000026234.13	novel	NA	NA	NA	NA	5284	2772	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAAACTTGTGTCTCT	NA	False	NA	NA	False	AATAAA	-1	NA	86273649	86269668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_86269700_86273600
ES.908.50	chr1	-	2761	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-17	5458	-17	318	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCTGGACAAGGAATGGT	NA	False	NA	60	True	NA	NA	NA	86287139	86277898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.51	chr1	-	2904	14	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-22	248	combination_of_known_junctions	FALSE	canonical	3	382	junction_13	1964.96669047456	3407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGCTTGTGTGGTATG	NA	False	NA	-10	True	NA	NA	NA	86286713	86277968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286288
ES.908.52	chr1	-	2586	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	14	5602	14	174	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGTATCTTAGAAGGG	NA	False	NA	-13	True	NA	NA	NA	86287108	86278042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.54	chr1	-	2416	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-42	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2057.09140614958	3405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTAATTTGTATCTTA	NA	False	NA	-19	True	NA	NA	NA	86286733	86278048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286716
ES.908.56	chr1	-	2538	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	-92	5756	-92	20	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTACATTTGGATTGT	NA	False	NA	-8	True	AGTAAA	-36	NA	86287214	86278196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.57	chr1	-	2509	13	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	6	10	intron_retention	FALSE	canonical	3	5685	junction_12	952.613014584388	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86287080	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.6	chr1	-	3057	1	Genic_Genomic	ENSMUSG00000026234.13	novel	NA	NA	NA	NA	3576	140	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTAAATTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	86275357	86272300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_86272300_86275400
ES.908.60	chr1	-	2326	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-110	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	2057.09140614958	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86286801	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286716
ES.908.61	chr1	-	2910	13	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-51	10	intron_retention	FALSE	canonical	3	382	junction_12	2044.85983457438	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86286742	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86285175_86285828_86285946_86286288
ES.908.62	chr1	-	2403	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2048.43442600273	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86287086	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278415_86278526_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.63	chr1	-	2391	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2068.06504195383	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86287084	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284284_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.64	chr1	-	2380	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2062.99910654597	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86287084	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281471_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.65	chr1	-	2118	11	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	1854	10	intron_retention	FALSE	canonical	3	5903	junction_7	851.323211242358	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86284837	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678
ES.908.66	chr1	-	2339	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-7	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2068.03757419541	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86287129	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284372_86284690_86285175_86285828_86285946_86286927
ES.908.67	chr1	-	2699	14	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-55	10	combination_of_known_junctions	FALSE	canonical	3	382	junction_13	1964.96669047456	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86286746	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286288
ES.908.68	chr1	-	1218	11	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2335	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2321.24060795084	3398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTCCTAGAGGTTACA	NA	False	NA	-18	True	AGTAAA	-26	NA	86284356	86278206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278262_86278679_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277
ES.908.69	chr1	-	2384	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2048.43442600273	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACTTCCTAGAGGTTA	NA	False	NA	-20	True	AGTAAA	-24	NA	86287084	86278208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278415_86278541_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.7	chr1	-	8028	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	36	138	0	-138	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAATAGGTTTGTCTGG	NA	False	NA	42	True	NA	NA	NA	86287086	86272578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.72	chr1	-	1878	11	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	22	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	2343.0766526087	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATACTTCCTAGAGGT	NA	False	NA	-22	True	AGTAAA	-22	NA	86287064	86278210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86280935_86284129_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.79	chr1	-	2049	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	2068.03757419541	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGACTTAATACTTCCTA	NA	False	NA	-27	True	AGTAAA	-17	NA	86287108	86278215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284441_86285019_86285175_86285828_86285946_86286927
ES.908.8	chr1	-	4323	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-4	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1992.83916018512	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACAGCCTGTGTTTGAT	NA	False	NA	-6	True	AGTAAA	-17	NA	86287090	86272626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86272886_86276546_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.81	chr1	-	2387	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-11	1	at_least_one_novel_splicesite	FALSE	canonical	2	144	junction_10	2033.73039354027	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGACTTAATACTTCCTA	NA	False	NA	-27	True	AGTAAA	-17	NA	86287097	86278215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284165_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.82	chr1	-	2121	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	2068.03757419541	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86287084	86278216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284357_86284838_86285175_86285828_86285946_86286927
ES.908.83	chr1	-	2471	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	2622.81153857152	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86286536	86278216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284456_86284678_86285175_86285828_86285946_86286288
ES.908.86	chr1	-	2272	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_13	2012.11850145694	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86286729	86278216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286688
ES.908.87	chr1	-	2381	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2051.20369337518	3400	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86287084	86278216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279926_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.9	chr1	-	3990	15	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	13	-186	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1992.83916018512	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACAGCCTGTGTTTGAT	NA	False	NA	-6	True	AGTAAA	-17	NA	86287109	86272626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86272902_86276914_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.96	chr1	-	4145	10	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-57	0	intron_retention	FALSE	canonical	3	5685	junction_9	721.407797210803	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287179	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278758_86279088_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285946_86286927
ES.908.98	chr1	-	3293	12	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	-10	0	intron_retention	FALSE	canonical	3	5685	junction_11	719.660434160353	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287096	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86278419_86278533_86278758_86279088_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ES.908.99	chr1	-	1135	6	NNC	ENSMUSG00000026234.13	novel	3072	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2613.10272281822	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287084	86278217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86278419_86278533_86278570_86284335_86284464_86284678_86285175_86285828_86285946_86286927
ES.9080.1	chr13	-	5595	7	NIC	ENSMUSG00000021368.16	novel	1246	8	NA	NA	-17	0	intron_retention	FALSE	canonical	3	148	junction_6	49.1211653861031	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	-17	True	AGTAAA	-16	NA	43324881	43305215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43305457_43306545_43306676_43308164_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ES.9080.2	chr13	-	1233	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	6	0	6	0	multi-exon	FALSE	canonical	1	7	junction_7	94.4833426632246	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324971	43305219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
ES.9080.3	chr13	-	1241	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	1	4	0	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324959	43305219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ES.9081.1	chr13	+	146	1	Intergenic	novelGene_7398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTGTGAGGGTGTG	NA	False	NA	NA	False	TTTAAA	-20	NA	43341410	43341556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43341400_43341600
ES.9082.1	chr13	-	6798	2	FSM	ENSMUSG00000051335.7	ENSMUST00000055341.7	6928	2	133	-3	133	3	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCAGCCTGGTCTTGTC	NA	False	NA	-1	True	AATAAA	-18	NA	43457515	43348717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43354721_43456720
ES.9082.2	chr13	-	3820	1	Intergenic	novelGene_7399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAACTTTATAATTA	NA	False	NA	NA	False	NA	NA	NA	43445128	43441308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43441300_43445100
ES.9083.1	chr13	+	155	1	Intergenic	novelGene_7400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTTTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43475022	43475177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43475000_43475200
ES.9084.1	chr13	+	162	1	Intergenic	novelGene_7402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43479588	43479750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43479600_43479800
ES.9085.1	chr13	-	3678	1	Intergenic	novelGene_7401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAAAGCGGGAAACAAAT	834	False	NA	NA	False	NA	NA	NA	43480651	43476973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43477000_43480700
ES.9086.1	chr13	-	1147	1	Intergenic	novelGene_7403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCACTTTTTTCATTCAT	NA	False	NA	NA	False	ATTAAA	-43	NA	43488364	43487217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43487200_43488400
ES.9087.1	chr13	+	172	1	Intergenic	novelGene_7404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	43493049	43493221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43493000_43493200
ES.9088.1	chr13	+	1399	3	ISM	ENSMUSG00000054021.7	ENSMUST00000222489.2	1943	4	-36	5309	-36	-3737	5prime_fragment	FALSE	canonical	3	17	junction_1	90.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGTATGTGTGTATC	NA	False	NA	NA	False	ATTAAA	-26	NA	43518935	43526471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_43519021_43524194_43524345_43525307
ES.9088.10	chr13	+	2406	8	ISM	ENSMUSG00000054021.7	ENSMUST00000220576.2	1579	9	23	586	1	-583	intron_retention	FALSE	canonical	3	180	junction_1	20.0244748204974	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	43519162	43540549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973
ES.9088.11	chr13	+	1750	1	NIC	ENSMUSG00000054021.7	novel	435	4	NA	NA	31	-9266	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACCCTTTAGTTTCTCC	NA	False	NA	NA	False	AATAAA	-24	NA	43519192	43520942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43519200_43520900
ES.9088.12	chr13	+	797	5	NNC	ENSMUSG00000054021.7	novel	1548	9	NA	NA	3215	393	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.4403961003894	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTCTTTAAGCTCTA	4662	False	NA	NA	False	AATAAA	-14	NA	43536363	43549072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43536481_43536584_43536709_43538973_43539090_43548212_43548378_43548797
ES.9088.2	chr13	+	1424	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	-27	1	-17	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	9	True	ATTAAA	-21	NA	43518954	43548678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ES.9088.3	chr13	+	1476	9	NIC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	-3	1	combination_of_known_junctions	FALSE	canonical	3	172	junction_8	20.7710736361893	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTTTTTGTACTTTT	NA	False	NA	11	True	ATTAAA	-23	NA	43519100	43548680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ES.9088.4	chr13	+	9212	8	ISM	ENSMUSG00000054021.7	ENSMUST00000220576.2	1579	9	-36	-6161	0	-1382	intron_retention	FALSE	canonical	3	180	junction_1	20.0244748204974	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	43519103	43547296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973
ES.9088.5	chr13	+	1537	10	NNC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	82.812297053094	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTTATTTTTTTGTAC	NA	False	NA	7	True	ATTAAA	-19	NA	43519105	43548676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43519217_43521870_43521941_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ES.9088.7	chr13	+	1979	4	FSM	ENSMUSG00000054021.7	ENSMUST00000220458.2	435	4	22	-1566	12	-6	multi-exon	FALSE	canonical	3	180	junction_1	26.4952825989835	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATTCAGTTATGATTT	NA	False	NA	NA	False	NA	NA	NA	43519125	43531774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170
ES.9088.8	chr13	+	2995	8	ISM	ENSMUSG00000054021.7	ENSMUST00000220576.2	1579	9	-3	23	-3	-20	intron_retention	FALSE	canonical	3	180	junction_1	20.0244748204974	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAGGGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	43519136	43541112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973
ES.9088.9	chr13	+	3473	9	NNC	ENSMUSG00000054021.7	novel	1579	9	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_8	68.4721658778222	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	9	True	ATTAAA	-21	NA	43519142	43548678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43519217_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43540271_43547352
ES.9089.1	chr13	+	990	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-62	872	-62	-5	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGCTGGTCACATTTCT	NA	False	NA	26	True	TATAAA	-26	NA	43551803	43555465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.11	chr13	+	771	6	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	559.377511167548	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACAGCTGGTCACATT	NA	False	NA	23	True	TATAAA	-23	NA	43551859	43555462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554931_43555054_43555237
ES.9089.12	chr13	+	924	8	NNC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	505.842356664523	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAACAGCTGGTCACAT	NA	False	NA	22	True	TATAAA	-22	NA	43551859	43555461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43552135_43552210_43552272_43552986_43553040_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.13	chr13	+	3342	3	FSM	ENSMUSG00000063200.5	ENSMUST00000223188.2	751	3	-2661	70	-4	-2	multi-exon	FALSE	canonical	3	1402	junction_2	86.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551861	43555468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43554895_43554975_43555054_43555237
ES.9089.14	chr13	+	3601	1	Genic_Genomic	ENSMUSG00000063200.5	novel	NA	NA	NA	NA	-2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43551863	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_43551900_43555500
ES.9089.17	chr13	+	1595	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	13	192	11	-192	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATCTGTAGAAGTAAAT	NA	False	NA	NA	False	CATAAA	-14	NA	43551878	43556145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.18	chr13	+	737	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-8	-6	intron_retention	FALSE	canonical	1	2	junction_2	592.319305780252	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43552102	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552272_43552986_43553046_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.19	chr13	+	742	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	16	-6	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43552126	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.2	chr13	+	2447	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-18	-629	-18	629	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCCGGTCTACTTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	43551847	43556966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.20	chr13	+	1614	7	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	16	-1	intron_retention	FALSE	canonical	3	1367	junction_3	68.3408532447629	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGACATGTAATACTG	NA	False	NA	NA	False	AATAAA	-13	NA	43552126	43556336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.21	chr13	+	957	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	32	-6	intron_retention	FALSE	canonical	3	1400	junction_2	64.3285317724569	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43552142	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552272_43552986_43553046_43554068_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.22	chr13	+	1627	2	FSM	ENSMUSG00000063200.5	ENSMUST00000222416.2	918	2	-815	106	-507	-6	multi-exon	FALSE	canonical	3	1402	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43553653	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43555054_43555237
ES.9089.3	chr13	+	2631	4	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	1402	junction_3	70.7687941272297	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551857	43555468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552272_43552986_43554895_43554975_43555054_43555237
ES.9089.4	chr13	+	2907	5	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-7	-2	intron_retention	FALSE	canonical	3	1274	junction_1	107.655410918356	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCACATTTCTTTT	NA	False	NA	29	True	TATAAA	-29	NA	43551858	43555468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552135_43552210_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.5	chr13	+	2187	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	1274	junction_1	98.7048124459998	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43551859	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552135_43552210_43552272_43552986_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.6	chr13	+	2017	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-6	-211	-6	211	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCAACACTATTAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	43551859	43556548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.7	chr13	+	1211	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	-6	595	-6	172	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTAGTACCTTTACCTC	NA	False	NA	10	True	AATAAA	-25	NA	43551859	43555742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.8	chr13	+	2671	6	NIC	ENSMUSG00000063200.5	novel	1800	8	NA	NA	-6	-6	intron_retention	FALSE	canonical	3	1274	junction_1	99.0220177536289	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43551859	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_43552135_43552210_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ES.9089.9	chr13	+	2978	4	FSM	ENSMUSG00000063200.5	ENSMUST00000222305.2	683	4	-2301	6	-6	-6	multi-exon	FALSE	canonical	3	1402	junction_3	73.1619208787376	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCTGGTCACATTTC	NA	False	NA	25	True	TATAAA	-25	NA	43551859	43555464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43554411_43554772_43554895_43554975_43555054_43555237
ES.909.1	chr1	+	237	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTTTTTCGAGACAG	NA	False	NA	NA	False	NA	NA	NA	86291681	86291918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86291700_86291900
ES.9090.1	chr13	-	188	1	Intergenic	novelGene_7405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGATTAAAACCGAA	NA	False	NA	NA	False	NA	NA	NA	43496859	43496671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43496700_43496900
ES.9090.2	chr13	-	158	2	Antisense	novelGene_ENSMUSG00000054021.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	3742	False	NA	NA	False	NA	NA	NA	43521850	43496700	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_43496809_43521800
ES.9090.3	chr13	-	160	1	Intergenic	novelGene_7406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGACCCTGCT	5331	False	NA	NA	False	NA	NA	NA	43520261	43520101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43520100_43520300
ES.9090.4	chr13	-	3456	1	Antisense	novelGene_ENSMUSG00000054021.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGAAAAAGGAGAAA	465	False	NA	NA	False	NA	NA	NA	43525127	43521671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_43521700_43525100
ES.9091.1	chr13	-	3243	16	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-9	22820	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.4066896431341	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACTGGAATCTTCAGT	NA	False	NA	NA	False	NA	NA	NA	43634767	43533330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43533347_43552640_43552676_43556338_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.10	chr13	-	7007	12	NIC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	3	-1	intron_retention	FALSE	canonical	3	178	junction_10	24.5164812165137	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCAGTTGAATT	NA	False	NA	-2	True	ATTAAA	-16	NA	43634755	43556151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43557166_43560087_43560200_43565886_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.11	chr13	-	4353	12	NIC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	3	-1	intron_retention	FALSE	canonical	0	0	junction_3	66.7884287498668	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCAGTTGAATT	NA	False	NA	-2	True	ATTAAA	-16	NA	43634755	43556151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43557166_43560087_43560200_43565886_43566039_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43589619_43615187_43615300_43633887
ES.9091.14	chr13	-	3620	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-253	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.5419760052841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTAGTGTCAGTTGAAT	NA	False	NA	-3	True	ATTAAA	-15	NA	43635011	43556152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578702_43588279_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.15	chr13	-	3260	16	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-6	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	76.4066896431341	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTAGTGTCAGTTGAAT	NA	False	NA	-3	True	ATTAAA	-15	NA	43634764	43556152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887_43633976_43634029_43634153_43634213
ES.9091.17	chr13	-	3519	15	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-206	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	59.7910050569004	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTAGTGTCAGTTGAAT	NA	False	NA	-3	True	ATTAAA	-15	NA	43634964	43556152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887_43634153_43634208
ES.9091.2	chr13	-	7946	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-10	-4565	-10	4565	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGCATCCCTGTATGT	NA	False	NA	NA	False	AATAAA	-29	NA	43634768	43551585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.20	chr13	-	4786	12	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-2	-3	intron_retention	FALSE	canonical	0	0	junction_8	66.9505800220525	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTAGTGTCAGTTGAA	NA	False	NA	-4	True	ATTAAA	-14	NA	43634760	43556153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.21	chr13	-	3171	15	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	13	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	59.7910050569004	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTAGTGTCAGTTGAA	NA	False	NA	-4	True	ATTAAA	-14	NA	43634745	43556153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887_43634201_43634384
ES.9091.22	chr13	-	3572	15	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-265	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	59.7910050569004	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTAGTGTCAGTTGAA	NA	False	NA	-4	True	ATTAAA	-14	NA	43635023	43556153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887_43634153_43634213
ES.9091.23	chr13	-	3397	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-182	-45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.5419760052841	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGCGATATAATTAACCA	NA	False	NA	-46	True	AATAAA	-24	NA	43634940	43556195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578603_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.24	chr13	-	3546	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-223	-53	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	84.3983198226652	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTAGCGATATA	NA	False	NA	-54	True	AATAAA	-16	NA	43634981	43556203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569959_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578706_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.25	chr13	-	3690	15	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-255	-54	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	78.7096187364203	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATGTAGCGATAT	NA	False	NA	-55	True	AATAAA	-15	NA	43635013	43556204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43586682_43586801_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.26	chr13	-	3505	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-276	142	-276	0	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	False	NA	0	True	TATAAA	-19	NA	43635034	43556292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.27	chr13	-	3489	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-264	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.5419760052841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	False	NA	0	True	TATAAA	-19	NA	43635022	43556292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.28	chr13	-	4339	13	NIC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	178	junction_11	21.5690106917824	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	False	NA	0	True	TATAAA	-19	NA	43634760	43556292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43589619_43615187_43615300_43633887
ES.9091.29	chr13	-	3466	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-239	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	64.5419760052841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	False	NA	0	True	TATAAA	-19	NA	43634997	43556292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578702_43588279_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.3	chr13	-	5092	14	NNC	ENSMUSG00000038546.10	novel	836	7	NA	NA	257	3506	intron_retention	FALSE	canonical	0	0	junction_1	59.3832203901517	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGCCCAATACAT	NA	False	NA	NA	False	NA	NA	NA	43634501	43552644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43555638_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.30	chr13	-	3159	14	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-2	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	81.7647078856233	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCGTGTCTTAATTTAA	NA	False	NA	0	True	TATAAA	-19	NA	43634760	43556292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578702_43588279_43588458_43589565_43589619_43615187_43615300_43633887_43634148_43634217
ES.9091.31	chr13	-	3006	11	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	70.0449141622716	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCGTGTCTTAATTT	NA	False	NA	-2	True	TATAAA	-17	NA	43634764	43556294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578704_43615183_43615300_43633887
ES.9091.32	chr13	-	2016	9	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	6413	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	76.6753505045787	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCGTGTCTTAATTT	NA	False	NA	-2	True	TATAAA	-17	NA	43577859	43556294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43577658
ES.9091.34	chr13	-	7043	8	NIC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	1959	-2	intron_retention	FALSE	canonical	3	208	junction_3	19.2056539294329	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCGTGTCTTAATTT	NA	False	NA	-2	True	TATAAA	-17	NA	43582313	43556294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43557166_43560087_43560200_43565886_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505
ES.9091.35	chr13	-	2908	14	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	295	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	60.339277443195	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCGTGTCTTAATTT	NA	False	NA	-2	True	TATAAA	-17	NA	43634463	43556294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589589_43589619_43615187_43615300_43633887
ES.9091.37	chr13	-	4609	10	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-5347	-2	intron_retention	FALSE	non_canonical	0	0	junction_8	72.4412064716052	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACCGTGTCTTAATTT	NA	False	NA	-2	True	TATAAA	-17	NA	43589619	43556294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43578702_43588279_43588458_43589565
ES.9091.39	chr13	-	3373	15	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-215	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	59.7910050569004	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTACCGTGTCTTAAT	NA	False	NA	-4	True	TATAAA	-15	NA	43634973	43556296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887_43634148_43634214
ES.9091.4	chr13	-	3397	14	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-5	2111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.7647078856233	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGACTGGCAGGCAATA	NA	False	NA	NA	False	NA	NA	NA	43634763	43554039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43554060_43556145_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.40	chr13	-	2612	14	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	301	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	81.7647078856233	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTACCGTGTCTTAAT	NA	False	NA	-4	True	TATAAA	-15	NA	43634457	43556296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578702_43588279_43588458_43589565_43589619_43615187_43615300_43633887_43634076_43634385
ES.9091.42	chr13	-	3183	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-223	411	-223	169	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTTGATGGAAGAAATC	NA	False	NA	NA	False	CATAAA	-21	NA	43634981	43556561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.43	chr13	-	2793	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-21	599	-21	-10	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACCAAAAATCCTG	NA	False	NA	NA	False	TTTAAA	-11	NA	43634779	43556749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.44	chr13	-	2139	11	ISM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-2	11263	-2	5641	5prime_fragment	FALSE	canonical	3	178	junction_9	17.9858277540957	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTATGTTTTTACTTGG	NA	False	NA	NA	False	AATAAA	-14	NA	43634760	43567413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.45	chr13	-	2343	10	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-213	5636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	68.291495774084	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACAAGGTTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-9	NA	43634971	43567418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578702_43588279_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.46	chr13	-	342	1	Intergenic	novelGene_7407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGTAGAAGCTGCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	43587719	43587377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43587400_43587700
ES.9091.47	chr13	-	246	1	Intergenic	novelGene_7408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATCTACTCCTTTCTT	7496	False	NA	NA	False	TATAAA	-28	NA	43608580	43608334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43608300_43608600
ES.9091.48	chr13	-	137	1	Intergenic	novelGene_7409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	43616765	43616628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43616600_43616800
ES.9091.49	chr13	-	2692	1	Intergenic	novelGene_7410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43628321	43625629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43625600_43628300
ES.9091.5	chr13	-	3641	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	-269	-1	-269	1	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTGTCAGTTGAATTTT	NA	False	NA	0	True	ATTAAA	-18	NA	43635027	43556149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.6	chr13	-	3587	13	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-220	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	64.5419760052841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43634978	43556150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ES.9091.7	chr13	-	3391	13	NIC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-188	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	64.3419683324103	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43634946	43556150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43589565_43589619_43615187_43615300_43633887
ES.9091.8	chr13	-	3325	14	NNC	ENSMUSG00000038546.10	novel	3371	14	NA	NA	-38	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	81.7647078856233	295	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCAGTTGAATT	NA	False	NA	-2	True	ATTAAA	-16	NA	43634796	43556151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43588276_43588458_43589565_43589619_43615187_43615300_43633887_43634304_43634376
ES.9092.1	chr13	+	155	1	Intergenic	novelGene_7411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43636073	43636228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43636100_43636200
ES.9093.1	chr13	+	3534	1	Antisense	novelGene_ENSMUSG00000021371.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43697793	43701327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_43697800_43701300
ES.9094.1	chr13	-	8157	2	NNC	ENSMUSG00000021371.6	novel	579	3	NA	NA	95	2416	intron_retention	FALSE	non_canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCACAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-32	NA	43699501	43689452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330
ES.9094.11	chr13	-	6290	8	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	11	-19	intron_retention	FALSE	non_canonical	0	0	junction_1	92.5105620004151	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTCTTTCTTAAC	NA	False	NA	NA	False	AATAAA	-10	NA	43713656	43691887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.12	chr13	-	4335	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	70	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.9135529875836	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTTTCTTTCTTAAC	NA	False	NA	NA	False	AATAAA	-10	NA	43713567	43691887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698047_43699163_43699303_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.13	chr13	-	1418	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-41	2962	-11	344	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTGTAAGGTGGAGA	NA	False	NA	NA	False	AATAAA	-20	NA	43713678	43694830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.15	chr13	-	1396	10	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	11	315	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	117.213006483448	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAAATGTACTCTCT	NA	False	NA	NA	False	NA	NA	NA	43713626	43694859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43707723_43707785_43708371_43708490_43713244
ES.9094.16	chr13	-	3375	8	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	7	313	intron_retention	FALSE	non_canonical	0	0	junction_1	115.193005740056	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAAATAAATGTACTCT	NA	False	NA	NA	False	NA	NA	NA	43713630	43694861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330_43699303_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.17	chr13	-	1295	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	7	43	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	86.6544863235597	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTCATTGTTTTGCCA	NA	False	NA	-8	True	AATAAA	-15	NA	43713660	43695131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698243_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.18	chr13	-	7345	6	NNC	ENSMUSG00000021371.6	novel	3191	6	NA	NA	14	43	intron_retention	FALSE	non_canonical	0	0	junction_1	104.591777879525	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTCATTGTTTTGCCA	NA	False	NA	-8	True	AATAAA	-15	NA	43713623	43695131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330_43702199_43703007_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.19	chr13	-	1094	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	9	41	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	110.460329417398	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTTCATTGTTTTGC	NA	False	NA	-10	True	AATAAA	-13	NA	43713658	43695133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702192_43703003_43703050_43704472_43704575_43705072_43705177_43708371_43708494_43713244
ES.9094.2	chr13	-	4413	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-74	0	-44	0	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	43713711	43691868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.20	chr13	-	1188	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	-1	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	83.9135529875836	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATTTTCATTGTTTT	NA	False	NA	-12	True	AATAAA	-11	NA	43713668	43695135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698047_43699163_43699303_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.22	chr13	-	1157	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	-85	3267	-55	39	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATTTTCATTGTTTT	NA	False	NA	-12	True	AATAAA	-11	NA	43713722	43695135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.23	chr13	-	907	10	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	361	39	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	106.890852372818	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACATTTTCATTGTTTT	NA	False	NA	-12	True	AATAAA	-11	NA	43713276	43695135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43708586_43708783_43713244
ES.9094.24	chr13	-	853	6	FSM	ENSMUSG00000021371.6	ENSMUST00000223353.2	3191	6	58	2280	28	-2280	multi-exon	FALSE	canonical	3	227	junction_5	20.8134571851963	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGCTTGTTGAAGTCT	NA	False	NA	NA	False	ATTAAA	-31	NA	43713609	43702078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.3	chr13	-	4178	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	-32	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	84.6596125670322	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTGTACAGTGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	43713699	43691870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43694985_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.4	chr13	-	5385	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	1	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	112.573309447666	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTTAACCTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	43713666	43691881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330_43698243_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.5	chr13	-	5198	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	-10	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.5790823467193	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTCTTAACCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	43713677	43691883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695439_43697330_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.6	chr13	-	4515	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	5	-15	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	86.6544863235597	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTCTTAACCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	43713632	43691883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695206_43697931_43698243_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ES.9094.7	chr13	-	4344	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	2	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.287176569107	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTCTTAACCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	43713665	43691883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_43695200_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708490_43713244
ES.9095.1	chr13	+	170	1	Intergenic	novelGene_7412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGCAAAACC	NA	False	NA	NA	False	NA	NA	NA	43735413	43735583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_43735400_43735600
ES.9096.1	chr13	-	171	1	Intergenic	novelGene_7413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTGGAGCAATCAGGGA	NA	False	NA	NA	False	NA	NA	NA	43740203	43740032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43740000_43740200
ES.9097.1	chr13	-	178	1	Intergenic	novelGene_7414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	43767417	43767239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43767200_43767400
ES.9098.1	chr13	+	3343	2	FSM	ENSMUSG00000044164.3	ENSMUST00000059986.3	3544	2	201	0	-72	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATGGTTCCCCTGATTT	3845	False	NA	NA	False	ATTAAA	-21	NA	43769386	43824421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43769544_43821235
ES.9098.2	chr13	+	3509	5	NNC	ENSMUSG00000044164.3	novel	457	3	NA	NA	-32	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.866025403784439	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGATGCATGGTTCCC	3885	False	NA	NA	False	ATTAAA	-14	NA	43769426	43824414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_43769544_43813607_43813726_43813815_43813846_43819233_43819299_43821235
ES.9098.3	chr13	+	3318	3	FSM	ENSMUSG00000044164.3	ENSMUST00000161817.2	457	3	11	-2872	11	-7	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGATGCATGGTTCCC	3928	False	NA	NA	False	ATTAAA	-14	NA	43769469	43824414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_43769544_43819233_43819299_43821235
ES.9099.1	chr13	-	275	1	Intergenic	novelGene_7415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAACCGCAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	43799989	43799714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_43799700_43800000
ES.91.1	chr1	-	5205	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	10892414	10887209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_10887200_10892400
ES.910.1	chr1	-	264	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAGA	9524	False	NA	NA	False	NA	NA	NA	86298874	86298610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86298600_86298900
ES.9100.1	chr13	-	745	3	FSM	ENSMUSG00000113252.2	ENSMUST00000223171.2	673	3	-73	1	-73	-1	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTTTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	44172071	44164068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_44164387_44165586_44165819_44171876
ES.9100.2	chr13	-	654	3	NNC	ENSMUSG00000113252.2	novel	673	3	NA	NA	-73	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAACTTGCTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	44172071	44164073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_44164387_44165586_44165733_44171876
ES.9101.1	chr13	+	175	1	Intergenic	novelGene_7416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGGATTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	44484824	44484999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44484800_44485000
ES.9102.1	chr13	+	1343	1	Intergenic	novelGene_7417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGGTCATGGGTGTGT	NA	False	NA	NA	False	NA	NA	NA	44515954	44517297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44516000_44517300
ES.9103.1	chr13	+	184	1	Intergenic	novelGene_7418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	44539348	44539532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44539300_44539500
ES.9104.1	chr13	-	5774	7	Fusion	ENSMUSG00000112936.2_ENSMUSG00000098107.2	novel	279	3	NA	NA	-18854	5960	multi-exon	TRUE	canonical	0	0	junction_1	1.46249406456535	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATCATATTACCCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	44563447	44511351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_44516454_44533621_44533700_44550656_44550729_44553579_44553638_44553831_44553988_44558088_44558330_44563380
ES.9104.2	chr13	-	5594	7	NNC	ENSMUSG00000112936.2	novel	450	3	NA	NA	-18730	5960	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	1.95078331845327	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATCATATTACCCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	44563323	44511351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_44515148_44515215_44516454_44517400_44517554_44533621_44533700_44550656_44550729_44553579_44553638_44563124
ES.9104.3	chr13	-	3549	5	NNC	ENSMUSG00000112936.2	novel	450	3	NA	NA	-18724	-16008	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.08972473588517	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44563317	44533319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_44533446_44533621_44533700_44550656_44553638_44558158_44558330_44563124
ES.9104.4	chr13	-	4103	1	Intergenic	novelGene_7419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTCCGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	44552901	44548798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44548800_44552900
ES.9104.5	chr13	-	1987	2	Intergenic	novelGene_7420	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCCAGTTGTCCGAGT	NA	False	NA	NA	False	NA	NA	NA	44553639	44548801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44550729_44553579
ES.9104.6	chr13	-	2759	1	Intergenic	novelGene_7421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	44563835	44561076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44561100_44563800
ES.9105.1	chr13	-	85	1	Intergenic	novelGene_7422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGTCCGTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	44632473	44632388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44632400_44632500
ES.9106.1	chr13	-	176	1	Intergenic	novelGene_7423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAACCAAGAACA	8785	False	NA	NA	False	NA	NA	NA	44695724	44695548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44695500_44695700
ES.9107.1	chr13	+	2608	1	Intergenic	novelGene_7424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATACATGTATGTGCAC	8496	False	NA	NA	False	TTTAAA	-15	NA	44714406	44717014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44714400_44717000
ES.9108.1	chr13	+	207	1	Intergenic	novelGene_7425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAGATCACTGTGCCC	7764	False	NA	NA	False	NA	NA	NA	44774385	44774592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44774400_44774600
ES.9109.1	chr13	+	177	1	Intergenic	novelGene_7426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCGAGCAGGGTC	7637	False	NA	NA	False	NA	NA	NA	44790052	44790229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44790100_44790200
ES.911.1	chr1	-	156	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAATAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	86308699	86308543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86308500_86308700
ES.9110.1	chr13	-	157	1	Intergenic	novelGene_7427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	44810093	44809936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44809900_44810100
ES.9111.1	chr13	+	135	1	Intergenic	novelGene_7428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAG	2549	False	NA	NA	False	NA	NA	NA	44822511	44822646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44822500_44822600
ES.9112.1	chr13	+	147	1	Intergenic	novelGene_7429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAATGATTGTTC	9405	False	NA	NA	False	NA	NA	NA	44829367	44829514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44829400_44829500
ES.9113.1	chr13	-	1658	4	Intergenic	novelGene_7430	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGGACGTTTCCGTGT	NA	False	NA	NA	False	NA	NA	NA	44855635	44832747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44834060_44834786_44834872_44851242_44851389_44855520
ES.9113.2	chr13	-	4831	3	Intergenic	novelGene_7431	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTCCTTTTTAAAGCC	NA	False	NA	NA	False	NA	NA	NA	44855671	44846370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44850905_44851242_44851389_44855520
ES.9114.1	chr13	+	173	1	Intergenic	novelGene_7432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATGTAAAAACACAT	7461	False	NA	NA	False	NA	NA	NA	44858410	44858583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44858400_44858600
ES.9115.1	chr13	+	1575	1	Intergenic	novelGene_7433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTCCAATGTCATCCT	8957	False	NA	NA	False	NA	NA	NA	44859906	44861481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44859900_44861500
ES.9116.1	chr13	+	5994	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-135	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	8449	False	NA	16	True	AATAAA	-18	NA	44882814	45075119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.10	chr13	+	5167	18	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	8	269	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	247.441748064309	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGTTGTTTGTTTCA	8913	False	NA	15	True	AATAAA	-18	NA	44883278	45074740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.100	chr13	+	4899	14	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	153431	6	43919	-3	3prime_fragment	FALSE	canonical	3	632	junction_1	87.9441727165188	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	45038177	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.101	chr13	+	4350	13	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	164982	377	55470	271	3prime_fragment	FALSE	canonical	3	641	junction_1	81.5701385312052	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	45049728	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.102	chr13	+	4082	13	ISM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	165430	-3	55470	3	3prime_fragment	FALSE	canonical	3	641	junction_1	81.5701385312052	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCCCTTTTGTACATA	NA	False	NA	NA	False	NA	NA	NA	45049728	45074474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.104	chr13	+	4316	13	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	55500	273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	227.323970359485	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	45049758	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073281
ES.9116.106	chr13	+	3035	12	ISM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	171936	274	61976	-274	3prime_fragment	FALSE	canonical	3	687	junction_1	72.7590839519071	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	45056234	45074197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.107	chr13	+	3163	12	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	62384	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	318.875140724235	957	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	45056642	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45056735_45059708_45060207_45060969_45061063_45063824_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.109	chr13	+	3414	5	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	70410	-3	intron_retention	FALSE	canonical	3	794	junction_2	37.3496987939662	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	45064668	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45064757_45066656_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.11	chr13	+	4483	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	8	330	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGGCTGTCTTTTCT	8913	False	NA	NA	False	AAAAAG	-17	NA	44883278	45073914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.110	chr13	+	3637	5	NIC	ENSMUSG00000038518.16	novel	8353	16	NA	NA	71726	0	intron_retention	FALSE	canonical	3	794	junction_2	37.2122291726792	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTGTCTTGTGGGAA	NA	False	NA	13	True	AATAAA	-15	NA	45065984	45075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45066763_45067126_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.111	chr13	+	2444	5	ISM	ENSMUSG00000038518.16	ENSMUST00000174683.8	8353	16	182280	4	72867	-4	3prime_fragment	FALSE	canonical	3	689	junction_1	75.9946544172681	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	45067125	45075112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.112	chr13	+	3433	2	Genic_Genomic	ENSMUSG00000038518.16	novel	4135	19	NA	NA	75107	3	multi-exon	FALSE	canonical	0	0	junction_1	0	954	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCCCTTTTGTACATA	NA	False	NA	NA	False	NA	NA	NA	45069365	45074474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_45069532_45071207
ES.9116.12	chr13	+	5313	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	8	273	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	8913	False	NA	19	True	AATAAA	-22	NA	44883278	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.13	chr13	+	4338	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	9	186	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTGAAGATGGTGAA	8914	False	NA	4	True	AATAAA	-12	NA	44883279	45073770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.14	chr13	+	5421	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	26	271	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	190.996291412512	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	8931	False	NA	17	True	AATAAA	-20	NA	44883296	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44883412_44885060_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.15	chr13	+	5408	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	259	271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.996291412512	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	9164	False	NA	17	True	AATAAA	-20	NA	44883529	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44883760_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.16	chr13	+	4304	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	402	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.996291412512	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGAAGTTTGGAGAAC	9307	False	NA	15	True	AATAAA	-23	NA	44883672	45073781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44883760_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.17	chr13	+	5913	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-221	1	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	185.168733528485	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGTCTTGTGGGAAG	9663	False	NA	14	True	AATAAA	-16	NA	44884028	45075117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.18	chr13	+	4612	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	-214	-263	-214	263	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGATAGAAGATACACACAC	9670	False	NA	81	True	TTTAAA	-37	NA	44884035	45073847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.19	chr13	+	5907	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	-240	-648	-191	0	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	9693	False	NA	16	True	AATAAA	-18	NA	44884058	45075119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.2	chr13	+	5906	18	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	23	-2	intron_retention	FALSE	canonical	3	33	junction_1	185.917587874221	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	8607	False	NA	11	True	AATAAA	-13	NA	44882972	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.20	chr13	+	5259	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	-237	-3	-188	3	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCCCTTTTGTACATA	9696	False	NA	NA	False	NA	NA	NA	44884061	45074474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.22	chr13	+	5472	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	-177	-1160	-177	273	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9707	False	NA	19	True	AATAAA	-22	NA	44884072	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.23	chr13	+	5360	18	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-177	273	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.940365721089	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9707	False	NA	19	True	AATAAA	-22	NA	44884072	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44885188_44885393_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.24	chr13	+	5741	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	-71	-1535	-71	0	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	9813	False	NA	16	True	AATAAA	-18	NA	44884178	45075119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.25	chr13	+	5643	19	NNC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	-55	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	247.959730153462	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	9829	False	NA	10	True	AATAAA	-12	NA	44884194	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884292_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073278
ES.9116.26	chr13	+	5331	19	NNC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	-44	271	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	244.137231192461	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	9840	False	NA	17	True	AATAAA	-20	NA	44884205	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027764_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.27	chr13	+	5385	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	-93	-273	-44	273	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9840	False	NA	19	True	AATAAA	-22	NA	44884205	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.28	chr13	+	4396	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	-70	693	-21	194	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGGTGAAGTTTGGAG	9863	False	NA	12	True	AATAAA	-20	NA	44884228	45073778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.29	chr13	+	5799	18	NIC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	-20	-8	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	248.703572809133	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACATTTTGTCTGTCT	9864	False	NA	5	True	AATAAA	-7	NA	44884229	45075108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884365_44884926_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.3	chr13	+	4485	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-27	195	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTGAAGTTTGGAGA	8618	False	NA	13	True	AATAAA	-21	NA	44882983	45073779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.30	chr13	+	4645	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-13	189	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	190.370107363992	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAGATGGTGAAGTT	9871	False	NA	7	True	AATAAA	-15	NA	44884236	45073773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44884926_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.31	chr13	+	5477	20	NIC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	-12	273	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	281.917749935211	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9872	False	NA	19	True	AATAAA	-22	NA	44884237	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884365_44885188_44885393_44912324_44912495_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.32	chr13	+	5200	18	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-5	269	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	239.739795507907	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGTTGTTTGTTTCA	9879	False	NA	15	True	AATAAA	-18	NA	44884244	45074740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44885188_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.33	chr13	+	5918	19	NIC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	189.535852825192	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGTCTTGTGGGA	9894	False	NA	12	True	AATAAA	-14	NA	44884259	45075115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884365_44884926_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.35	chr13	+	5263	19	NNC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	19	273	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	245.818769185656	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9903	False	NA	19	True	AATAAA	-22	NA	44884268	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001891_45027764_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.36	chr13	+	5293	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	-23	273	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	185.168733528485	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9910	False	NA	19	True	AATAAA	-22	NA	44884275	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.38	chr13	+	5890	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	189.952885646499	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTGTGGGAAGG	9949	False	NA	15	True	AATAAA	-17	NA	44884314	45075118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44884926_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.39	chr13	+	5282	19	NNC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	1	273	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	238.499974118072	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9949	False	NA	19	True	AATAAA	-22	NA	44884314	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063944_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.4	chr13	+	5416	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	7	273	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	8652	False	NA	19	True	AATAAA	-22	NA	44883017	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.40	chr13	+	4291	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	1	197	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	185.168733528485	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGTGAAGTTTGGAGAAC	9949	False	NA	15	True	AATAAA	-23	NA	44884314	45073781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.41	chr13	+	5437	18	NNC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	254.451768361207	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	9950	False	NA	10	True	AATAAA	-12	NA	44884315	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884411_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073278
ES.9116.42	chr13	+	7142	18	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	14	273	intron_retention	FALSE	canonical	3	65	junction_1	181.453970065676	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9983	False	NA	19	True	AATAAA	-22	NA	44884348	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.43	chr13	+	5750	20	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	22	-4	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	283.391167852176	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	9991	False	NA	9	True	AATAAA	-11	NA	44884356	45075112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884389_44885188_44885393_44912324_44912495_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.44	chr13	+	5400	20	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	26	273	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	279.256452396334	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	9995	False	NA	19	True	AATAAA	-22	NA	44884360	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44885188_44885393_44912324_44912495_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.45	chr13	+	5484	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	34	273	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	190.370107363992	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	10003	False	NA	19	True	AATAAA	-22	NA	44884368	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44884926_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.46	chr13	+	5843	19	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	41	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	190.370107363992	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATTTTGTCTGTCTTG	10010	False	NA	7	True	AATAAA	-9	NA	44884375	45075110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44884926_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.47	chr13	+	5439	18	NIC	ENSMUSG00000038518.16	novel	5019	19	NA	NA	43	-4	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	239.739795507907	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	44884377	45075112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884411_44885188_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.48	chr13	+	5357	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	122	273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.996291412512	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44884456	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884634_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.49	chr13	+	5898	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	-276	375	136	273	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44884470	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.50	chr13	+	5707	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	143	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.996291412512	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTCTGTCTTGTGGGA	NA	False	NA	12	True	AATAAA	-14	NA	44884477	45075115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884634_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.51	chr13	+	4370	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	144	195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	190.996291412512	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTGAAGTTTGGAGA	NA	False	NA	13	True	AATAAA	-21	NA	44884478	45073779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884634_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.52	chr13	+	6239	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	-243	1	169	-1	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTCTTGTGGGAAGG	NA	False	NA	15	True	AATAAA	-17	NA	44884503	45075118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.53	chr13	+	4890	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	-234	1341	178	194	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGGTGAAGTTTGGAG	NA	False	NA	12	True	AATAAA	-20	NA	44884512	45073778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.55	chr13	+	5832	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	1	-3	intron_retention	FALSE	canonical	3	57	junction_2	189.746376777002	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	44884763	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.56	chr13	+	5661	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	3	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	190.996291412512	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	44884765	45075112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44884879_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.57	chr13	+	5307	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	61	629	-36	19	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTCCTGTAAATTGTTT	NA	False	NA	NA	False	NA	NA	NA	44884807	45074490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.59	chr13	+	6100	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-35	-2	intron_retention	FALSE	canonical	1	3	junction_2	250.207469468395	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	11	True	AATAAA	-13	NA	44884808	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44912324_44912495_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.6	chr13	+	5640	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-95	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	247.306633529419	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACATTTTGTCTGTCTTGT	8810	False	NA	8	True	AATAAA	-10	NA	44883175	45075111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067325_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.61	chr13	+	4451	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	188	intron_retention	FALSE	canonical	0	0	junction_1	202.161435723409	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGAAGATGGTGAAGT	NA	False	NA	6	True	AATAAA	-14	NA	44884809	45073772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.62	chr13	+	7828	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	-3	intron_retention	FALSE	canonical	3	632	junction_5	82.4600045097622	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	44884809	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.63	chr13	+	4755	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	186	intron_retention	FALSE	canonical	1	3	junction_2	250.207469468395	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTGAAGATGGTGAA	NA	False	NA	4	True	AATAAA	-12	NA	44884809	45073770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44912324_44912495_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.64	chr13	+	5748	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	-6	intron_retention	FALSE	canonical	0	0	junction_4	200.895961880771	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATTTTGTCTGTCTTG	NA	False	NA	7	True	AATAAA	-9	NA	44884809	45075110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.65	chr13	+	5710	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	190.578788671137	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTTTGTCTGTCTTGTG	NA	False	NA	9	True	AATAAA	-11	NA	44884809	45075112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884972_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.66	chr13	+	5793	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	-2	intron_retention	FALSE	canonical	0	0	junction_1	202.161435723409	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	11	True	AATAAA	-13	NA	44884809	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.67	chr13	+	6427	5	FSM	ENSMUSG00000038518.16	ENSMUST00000174557.8	1322	5	-32	-5073	-32	5073	multi-exon	FALSE	canonical	3	669	junction_4	34.554305086342	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATAGCTGTCCAGGCTAG	NA	False	NA	NA	False	NA	NA	NA	44884811	45043577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179
ES.9116.68	chr13	+	5413	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-32	271	intron_retention	FALSE	canonical	3	57	junction_2	189.746376777002	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	44884811	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.69	chr13	+	6001	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-32	-3	intron_retention	FALSE	canonical	3	632	junction_5	78.7051211405586	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	44884811	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.7	chr13	+	5430	18	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-34	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	253.194674613419	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	8871	False	NA	10	True	AATAAA	-12	NA	44883236	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883254_44885188_44885393_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.70	chr13	+	6115	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-32	273	intron_retention	FALSE	canonical	3	632	junction_5	82.5673020935043	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44884811	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.72	chr13	+	6210	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-31	-6	intron_retention	FALSE	canonical	0	0	junction_3	251.838793234438	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACATTTTGTCTGTCTTG	NA	False	NA	7	True	AATAAA	-9	NA	44884812	45075110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44885393_44976855_44976992_45001755_45001898_45007257_45007546_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.75	chr13	+	5545	18	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-30	271	intron_retention	FALSE	canonical	0	0	junction_1	196.416582926297	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	44884813	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44885393_44976863_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.76	chr13	+	4493	14	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-24	273	intron_retention	FALSE	non_canonical	0	0	junction_7	218.722731182872	1005	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44884819	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056465_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.77	chr13	+	4350	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-14	188	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	190.578788671137	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGAAGATGGTGAAGT	NA	False	NA	6	True	AATAAA	-14	NA	44884829	45073772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44884972_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.78	chr13	+	7429	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-6	271	intron_retention	FALSE	canonical	3	632	junction_5	82.4600045097622	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	44884837	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.8	chr13	+	5696	19	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	245.354367053246	1009	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	8891	False	NA	11	True	AATAAA	-13	NA	44883256	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069901_45070001_45073275
ES.9116.80	chr13	+	5603	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-5	271	intron_retention	FALSE	canonical	3	632	junction_5	78.7051211405586	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	44884838	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.82	chr13	+	4412	17	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-4	185	intron_retention	FALSE	canonical	3	57	junction_2	189.746376777002	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTTGAAGATGGTGA	NA	False	NA	3	True	AATAAA	-11	NA	44884839	45073769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44885393_44976855_44976992_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.83	chr13	+	5519	18	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	1	273	intron_retention	FALSE	canonical	0	0	junction_16	192.425710286434	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44884844	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068428_45069901_45070001_45073275
ES.9116.84	chr13	+	5949	18	NNC	ENSMUSG00000038518.16	novel	644	4	NA	NA	892	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.416582926297	1007	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	11	True	AATAAA	-13	NA	44886226	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44886830_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.85	chr13	+	4182	18	NNC	ENSMUSG00000038518.16	novel	644	4	NA	NA	-863	189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.416582926297	988	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAGATGGTGAAGTT	NA	False	NA	7	True	AATAAA	-15	NA	44886652	45073773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44886830_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.86	chr13	+	5110	18	NNC	ENSMUSG00000038518.16	novel	644	4	NA	NA	-820	273	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.416582926297	1003	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	44886695	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44886830_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.87	chr13	+	5649	18	NIC	ENSMUSG00000038518.16	novel	456	4	NA	NA	-158	-3	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	195.130441688006	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	False	NA	10	True	AATAAA	-12	NA	44887357	45075113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44887662_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.88	chr13	+	177	1	Intergenic	novelGene_7438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	44920477	44920654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44920500_44920700
ES.9116.89	chr13	+	3143	1	Intergenic	novelGene_7439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTAGTTATGGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	44923937	44927080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44923900_44927100
ES.9116.9	chr13	+	5698	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	8903	False	NA	16	True	AATAAA	-18	NA	44883268	45075119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.90	chr13	+	5119	18	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	-17196	271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	258.583699044941	991	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	44976970	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44976992_45001755_45001898_45025062_45025323_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.91	chr13	+	8249	1	Intergenic	novelGene_7445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCCCAGCCATACCC	NA	False	NA	NA	False	NA	NA	NA	44982526	44990775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_44982500_44990800
ES.9116.92	chr13	+	5257	17	NNC	ENSMUSG00000038518.16	novel	644	4	NA	NA	-5759	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.161435723409	995	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTGTCTTGTGGGAA	NA	False	NA	13	True	AATAAA	-15	NA	44988407	45075116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_44988453_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.93	chr13	+	4920	17	NNC	ENSMUSG00000038518.16	novel	644	4	NA	NA	5931	275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202.161435723409	987	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTTTCATAATTG	NA	False	NA	21	True	AATAAA	-24	NA	45000189	45074746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45000268_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.94	chr13	+	3843	16	ISM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	117505	-162	7496	162	3prime_fragment	FALSE	canonical	3	632	junction_3	85.9425130861063	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGGAATAAAGGCTTTT	NA	False	NA	-20	True	NA	NA	NA	45001754	45073746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.95	chr13	+	5211	16	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	117008	5	7496	-2	3prime_fragment	FALSE	canonical	3	632	junction_3	85.9425130861063	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTCTGTCTTGTGGG	NA	False	NA	11	True	AATAAA	-13	NA	45001754	45075114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.96	chr13	+	4700	15	ISM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	143010	375	33498	273	3prime_fragment	FALSE	canonical	3	632	junction_2	88.6646974360629	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTTTGTTTCATAAT	NA	False	NA	19	True	AATAAA	-22	NA	45027756	45074744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.97	chr13	+	4619	16	NNC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	33522	271	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	208.713157760171	963	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTGTTTGTTTCATA	NA	False	NA	17	True	AATAAA	-20	NA	45027780	45074742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45027929_45038179_45038357_45049729_45049966_45055701_45056116_45056170_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.98	chr13	+	5106	13	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	33598	3	intron_retention	FALSE	canonical	3	632	junction_2	85.9952760330473	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCCCTTTTGTACATA	NA	False	NA	NA	False	NA	NA	NA	45027856	45074474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45067853_45068239_45068424_45069892_45070001_45073275
ES.9116.99	chr13	+	5998	1	NIC	ENSMUSG00000038518.16	novel	4135	19	NA	NA	43284	5036	mono-exon	FALSE	NA	NA	NA	NA	NA	696	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45037542	45043540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45037500_45043500
ES.9117.1	chr13	+	6296	1	Intergenic	novelGene_7449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATACCAATCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	45115483	45121779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_45115500_45121800
ES.9118.1	chr13	+	3155	1	Intergenic	novelGene_7450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTCTGAGCAAGACCC	NA	False	NA	NA	False	NA	NA	NA	45125211	45128366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_45125200_45128400
ES.9119.1	chr13	-	4999	2	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACACAAAACCAAGCAGACA	NA	False	NA	NA	False	NA	NA	NA	44883821	44878568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44879482_44879735
ES.912.1	chr1	-	206	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATACTGTGAGGCTATA	NA	False	NA	NA	False	NA	NA	NA	86318263	86318057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86318100_86318300
ES.9120.1	chr13	-	4912	18	Intergenic	novelGene_7434	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACGCCCTTCACTCCCCC	4887	False	NA	NA	False	NA	NA	NA	45074300	44885012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44885391_44976853_44976991_45001754_45001896_45027756_45027927_45038177_45038356_45049728_45049964_45055699_45056733_45059706_45060210_45060967_45061061_45063816_45063936_45064010_45064083_45064640_45064756_45066655_45066762_45067125_45067308_45067719_45067851_45068237_45068422_45069890_45069999_45073273
ES.9120.10	chr13	-	189	2	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAATTCTGGGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	44920342	44915092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44915254_44920314
ES.9120.11	chr13	-	174	1	Intergenic	novelGene_7436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAGCTTTATAT	NA	False	NA	NA	False	NA	NA	NA	44915282	44915108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44915100_44915300
ES.9120.12	chr13	-	232	1	Intergenic	novelGene_7437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGAGAAGAAATTTCAA	NA	False	NA	NA	False	AAGAAA	-35	NA	44917503	44917271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44917300_44917500
ES.9120.13	chr13	-	5253	1	Intergenic	novelGene_7440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGGCCAGACCTATACA	1775	False	NA	NA	False	NA	NA	NA	44945401	44940148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44940100_44945400
ES.9120.14	chr13	-	4290	2	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-43	NA	44960900	44956401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44957439_44957647
ES.9120.15	chr13	-	3432	1	Intergenic	novelGene_7441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	44960900	44957468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44957500_44960900
ES.9120.16	chr13	-	306	1	Intergenic	novelGene_7442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCTGTTTTTTGACAT	NA	False	NA	NA	False	AGTAAA	-38	NA	44965907	44965601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44965600_44965900
ES.9120.17	chr13	-	204	1	Intergenic	novelGene_7443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAGAGGTATTGGAGG	NA	False	NA	NA	False	NA	NA	NA	44965908	44965704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44965700_44965900
ES.9120.18	chr13	-	175	1	Intergenic	novelGene_7444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAAAAAAGAAAAGAAAAA	4714	False	NA	NA	False	NA	NA	NA	44978282	44978107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44978100_44978300
ES.9120.19	chr13	-	3029	1	FSM	ENSMUSG00002075018.1	ENSMUST00020183788.1	119	1	-1802	-1108	-1802	1108	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACATAAAGTTAAAGATG	8584	False	NA	NA	False	NA	NA	NA	44993561	44990532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_44990500_44993600
ES.9120.2	chr13	-	7865	3	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACGCCCTTCACTCCCCC	NA	False	NA	NA	False	NA	NA	NA	44900346	44885012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44885605_44890335_44893139_44895876
ES.9120.20	chr13	-	1986	1	Intergenic	novelGene_7446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45006413	45004427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45004400_45006400
ES.9120.21	chr13	-	182	1	Intergenic	novelGene_7447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATTACAT	NA	False	NA	NA	False	NA	NA	NA	45033732	45033550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45033600_45033700
ES.9120.22	chr13	-	1556	1	Intergenic	novelGene_7448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	45063436	45061880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45061900_45063400
ES.9120.7	chr13	-	170	1	Intergenic	novelGene_7435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44907516	44907346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_44907300_44907500
ES.9120.8	chr13	-	3800	2	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TATAAA	-6	NA	44920723	44911405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44914967_44920484
ES.9120.9	chr13	-	4086	1	Antisense	novelGene_ENSMUSG00000038518.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	TATAAA	-6	NA	44915491	44911405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_44911400_44915500
ES.9121.1	chr13	-	1817	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	25	-480	25	476	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAGTAAACAAAGAACT	NA	False	NA	NA	False	ATTAAA	-17	NA	45155598	45075074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.10	chr13	-	1399	10	NNC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	235.76814306422	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155550	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45075931_45076624_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45153079_45153191_45155392
ES.9121.11	chr13	-	2423	10	NNC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	7	0	intron_retention	FALSE	canonical	0	0	junction_8	206.795181069531	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155560	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45152754_45153191_45155392
ES.9121.12	chr13	-	878	4	NIC	ENSMUSG00000057531.15	novel	1082	6	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	213.423418479687	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACACTGTGCAGCTG	NA	False	NA	NA	False	AATAAA	-8	NA	45155601	45075561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45155392
ES.9121.13	chr13	-	955	5	NIC	ENSMUSG00000057531.15	novel	1082	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	221.835947267344	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACACTGTGCAGCTG	NA	False	NA	NA	False	AATAAA	-8	NA	45155545	45075561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45123521_45123655_45155392
ES.9121.14	chr13	-	1144	7	NNC	ENSMUSG00000057531.15	novel	550	6	NA	NA	21	95	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	199.601895448582	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGACATTTGCATGTGTAA	NA	False	NA	NA	False	AATAAA	-16	NA	45155602	45100126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45100629_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.15	chr13	-	2591	7	ISM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	53	29135	2	569	5prime_fragment	FALSE	canonical	3	463	junction_1	45.7553882680014	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCACATTCACAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	45155570	45104689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.16	chr13	-	5407	2	ISM	ENSMUSG00000057531.15	ENSMUST00000223265.2	676	4	-3366	4503	-3366	534	5prime_fragment	FALSE	canonical	3	463	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45126982	45104724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_45106671_45123521
ES.9121.17	chr13	-	2824	4	ISM	ENSMUSG00000057531.15	ENSMUST00000222805.2	1231	8	105	31664	66	-626	5prime_fragment	FALSE	canonical	3	511	junction_1	34.7211110933328	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATATTTAAATATGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	45155462	45136922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.18	chr13	-	2930	1	NIC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	-10	-16356	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTGAGTATTCTGTC	NA	False	NA	NA	False	NA	NA	NA	45155582	45152652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45152700_45155600
ES.9121.2	chr13	-	1398	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	-31	-5	-31	1	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGGTGAGTATATGG	NA	False	NA	NA	False	AATAAA	-20	NA	45155654	45075549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.3	chr13	-	1333	9	NNC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	-12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.034498005456	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTGGTGAGTATATGG	NA	False	NA	NA	False	AATAAA	-20	NA	45155584	45075549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45075931_45076624_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.4	chr13	-	1293	9	NIC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	169.530924538858	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155583	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.5	chr13	-	881	5	NIC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	196.140893237489	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155580	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45155392
ES.9121.7	chr13	-	1270	9	NNC	ENSMUSG00000057531.15	novel	1305	10	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	173.034498005456	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155543	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45075931_45076624_45076769_45084471_45084634_45123510_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.8	chr13	-	4453	8	NIC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	-10	0	intron_retention	FALSE	canonical	3	11	junction_3	180.463462297745	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155582	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45123521_45123655_45136216_45139572_45145494_45145546_45147160_45147215_45155392
ES.9121.9	chr13	-	1367	11	NIC	ENSMUSG00000057531.15	novel	1362	10	NA	NA	89	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	197.554068548334	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155439	45075560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45152995_45153191_45155392
ES.9122.1	chr13	-	249	1	Intergenic	novelGene_7451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACACAGAGATATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	45174098	45173849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45173800_45174100
ES.9122.2	chr13	-	128	1	Intergenic	novelGene_7452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGGACAGCTACAGTG	NA	False	NA	NA	False	NA	NA	NA	45174099	45173971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45174000_45174100
ES.9123.1	chr13	-	857	1	FSM	ENSMUSG00000078915.3	ENSMUST00000109187.3	630	1	-57	-170	-57	170	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCTATCAGTTGACCTT	NA	False	NA	NA	False	NA	NA	NA	45232660	45231803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_45231800_45232700
ES.9124.1	chr13	-	179	1	Antisense	novelGene_ENSMUSG00000047061.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATATTCT	NA	False	NA	NA	False	NA	NA	NA	45234326	45234147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_45234100_45234300
ES.9125.1	chr13	-	180	1	Intergenic	novelGene_7453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAACGAAAAG	NA	False	NA	NA	False	NA	NA	NA	45277895	45277715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45277700_45277900
ES.9126.1	chr13	-	1037	6	Antisense	novelGene_ENSMUSG00000113772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTTATGACTGGAACC	NA	False	NA	NA	False	AGTAAA	-14	NA	45396427	45389600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_45390112_45390221_45390338_45395410_45395567_45395932_45395969_45396089_45396128_45396247
ES.9127.1	chr13	-	730	5	NNC	ENSMUSG00000113919.2	novel	505	2	NA	NA	19071	1773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGGTATGGTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	45402116	45398334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45398586_45400005_45400107_45400301_45400377_45401637_45401745_45401920
ES.9128.1	chr13	+	3105	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	-40	0	-40	0	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	4355	False	NA	NA	False	AATAAA	-15	NA	45543177	45565498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
ES.9128.2	chr13	+	2981	7	NNC	ENSMUSG00000038175.11	novel	3065	7	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.3478192442951	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	4371	False	NA	NA	False	AATAAA	-15	NA	45543193	45565498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45543520_45544772_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
ES.9128.3	chr13	+	3032	8	NNC	ENSMUSG00000038175.11	novel	3065	7	NA	NA	-8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4338615269366	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGGGCCTTTGTGAT	4387	False	NA	NA	False	AATAAA	-10	NA	45543209	45565493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45543317_45543352_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
ES.9129.1	chr13	+	1615	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	-30	-5	-30	5	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGTTTGCGTGTTCA	NA	False	NA	27	True	AATATA	-21	NA	45660889	45699863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ES.9129.2	chr13	+	1499	9	NNC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	30.5655034311559	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGCTGGAGTTTGCG	NA	False	NA	21	True	AATATA	-15	NA	45660932	45699857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45674602_45674696_45683183_45683266_45685769_45685877_45692500_45692544_45699348
ES.9129.3	chr13	+	1662	10	NNC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	14	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	25.8370965001015	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGAGTTTGCGTGTT	NA	False	NA	25	True	AATATA	-19	NA	45660933	45699861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45674602_45674696_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ES.9129.4	chr13	+	1404	8	NIC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	15	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	24.2015347801392	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGCTGGAGTTTGCG	NA	False	NA	21	True	AATATA	-15	NA	45660934	45699857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45699348
ES.9129.5	chr13	+	5039	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	17	-3476	17	3476	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACATTGTTTTATTATA	NA	False	NA	NA	False	TTTAAA	-23	NA	45660936	45703334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ES.9129.6	chr13	+	3528	1	NIC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	-3299	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGCTGGAGTTTGCG	NA	False	NA	21	True	AATATA	-15	NA	45696329	45699857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_45696300_45699900
ES.913.1	chr1	-	141	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTG	NA	False	NA	NA	False	NA	NA	NA	86320920	86320779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86320800_86320900
ES.9130.1	chr13	-	1827	1	ISM	ENSMUSG00000046876.17	ENSMUST00000091628.11	10569	8	413392	3	320704	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTGTCTTCGCCGTC	7946	False	NA	NA	False	AATAAA	-18	NA	45705060	45703233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_45703200_45705100
ES.9131.1	chr13	+	2400	1	Intergenic	novelGene_7454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGACACTCAGAGA	NA	False	NA	NA	False	NA	NA	NA	45801954	45804354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_45802000_45804400
ES.9132.1	chr13	-	3700	7	NNC	ENSMUSG00000046876.17	novel	10569	8	NA	NA	39500	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATATATAGATATATAT	NA	False	NA	NA	False	AATAAA	-16	NA	46078933	45709923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_45711062_45720048_45722057_45851296_45851422_45888590_45888655_45948984_45949114_46005803_46005933_46078826
ES.9132.2	chr13	-	178	1	Intergenic	novelGene_7455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTTGTTTGTTTGTT	7733	False	NA	NA	False	NA	NA	NA	45844729	45844551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45844600_45844700
ES.9132.3	chr13	-	6536	1	Intergenic	novelGene_7456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAACCCCACCCTTTT	7603	False	NA	NA	False	NA	NA	NA	45938651	45932115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_45932100_45938700
ES.9132.4	chr13	-	178	1	Intergenic	novelGene_7457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	46066267	46066089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_46066100_46066300
ES.9133.1	chr13	+	3377	4	FSM	ENSMUSG00000038132.7	ENSMUST00000037923.5	3086	4	-287	-4	-287	4	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCATCAGTTATTTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	46571622	46584575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46572675_46573750_46573875_46575326_46575382_46582429
ES.9134.1	chr13	+	2999	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	64	650	64	-4	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGAGATGAATTCTC	NA	False	NA	NA	False	AGTAAA	-28	NA	46655387	46803107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ES.9134.2	chr13	+	3539	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	188	-14	-89	14	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATATTAAAAACCTGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	46655511	46803771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ES.9134.3	chr13	+	1775	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	208	1730	-69	25	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTGTGATTTTACTT	NA	False	NA	NA	False	NA	NA	NA	46655531	46802027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ES.9134.4	chr13	+	1992	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	212	1509	-65	246	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAAGGCTCTATTTT	NA	False	NA	NA	False	TTTAAA	-16	NA	46655535	46802248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ES.9134.5	chr13	+	1833	14	NNC	ENSMUSG00000021373.17	novel	3713	13	NA	NA	-43	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.63459396947833	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTGTGTGATTTTACT	NA	False	NA	NA	False	NA	NA	NA	46655557	46802026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46655688_46678413_46678499_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ES.9134.6	chr13	+	1531	3	NNC	ENSMUSG00000021373.17	novel	3713	13	NA	NA	4347	-19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAATTGTTTAAATA	NA	False	NA	NA	False	AGTAAA	-13	NA	46797880	46803092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46797935_46800001_46800143_46801756
ES.9134.7	chr13	+	1588	3	NNC	ENSMUSG00000021373.17	novel	3713	13	NA	NA	5763	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGAGATGAATTCTC	NA	False	NA	NA	False	AGTAAA	-28	NA	46799296	46803107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46799393_46800001_46800143_46801756
ES.9135.1	chr13	+	177	1	Intergenic	novelGene_7458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	46803794	46803971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_46803800_46804000
ES.9136.1	chr13	+	3757	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-85	-8	-85	8	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822912	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.10	chr13	+	3499	5	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-41	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.7140433093214	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822956	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823556_46823629_46823732_46824684_46824806_46827021_46827146_46828987
ES.9136.11	chr13	+	3690	5	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-34	6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	81.8485644345703	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTGTCTGTGCCTA	NA	False	NA	13	True	AATAAA	-13	NA	46822963	46831538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827855_46828987
ES.9136.12	chr13	+	3614	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-34	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822963	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823544_46823635_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.13	chr13	+	4825	4	ISM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-34	-8	-34	8	intron_retention	FALSE	canonical	3	180	junction_2	8.05536398239638	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822963	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728
ES.9136.15	chr13	+	3419	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTTGTCTGTGCC	NA	False	NA	11	True	AATAAA	-11	NA	46822966	46831536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823005_46823284_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.16	chr13	+	8572	1	Genic_Genomic	ENSMUSG00000069237.9	novel	NA	NA	NA	NA	-31	6	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTGTCTGTGCCTA	NA	False	NA	13	True	AATAAA	-13	NA	46822966	46831538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_46823000_46831500
ES.9136.17	chr13	+	1297	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-28	1961	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGGGTCTGTTCTCAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	46822969	46829251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823522_46823635_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.18	chr13	+	3690	5	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-26	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.5675813381304	228	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTGTCTGTGCCTA	NA	False	NA	13	True	AATAAA	-13	NA	46822971	46831538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824690_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.19	chr13	+	2544	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-17	1137	-17	-1137	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGTGAAATGCATTTA	NA	False	NA	NA	False	ACTAAA	-33	NA	46822980	46830395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.2	chr13	+	1486	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-72	2250	-72	1992	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAATGTCAAGGAACTT	NA	False	NA	NA	False	NA	NA	NA	46822925	46829282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.20	chr13	+	1491	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-10	1961	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.9412582415203	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGGGTCTGTTCTCAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	46822987	46829251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828657_46828756_46828987
ES.9136.22	chr13	+	2953	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTTGTCTGTGCC	NA	False	NA	11	True	AATAAA	-11	NA	46822999	46831536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987_46829799_46830511
ES.9136.23	chr13	+	3475	4	NIC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	55	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	89.397986554508	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTTGTCTGTGCCTA	NA	False	NA	13	True	AATAAA	-13	NA	46823052	46831538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_46823732_46824684_46824806_46827021_46827146_46828987
ES.9136.24	chr13	+	3496	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	90	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46823087	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987_46830500_46830585
ES.9136.25	chr13	+	2941	4	ISM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	1684	-8	15	8	3prime_fragment	FALSE	canonical	3	172	junction_3	9.97775303139718	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46824681	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.3	chr13	+	3662	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-64	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822933	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823556_46823629_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.5	chr13	+	3823	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-53	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	93.9412582415203	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822944	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828657_46828756_46828987
ES.9136.6	chr13	+	5427	3	ISM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	-53	-8	-53	8	intron_retention	FALSE	canonical	3	180	junction_2	9	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822944	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_46823732_46824684_46824806_46827021
ES.9136.7	chr13	+	3641	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-53	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGTGTTGTCTGTGCC	NA	False	NA	11	True	AATAAA	-11	NA	46822944	46831536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823556_46823635_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.8	chr13	+	3584	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-44	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTCTGTGCCTATT	NA	False	NA	15	True	AATAAA	-15	NA	46822953	46831540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823502_46823633_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9136.9	chr13	+	2494	6	NNC	ENSMUSG00000069237.9	novel	3664	5	NA	NA	-41	-1138	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.234034851256	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTGTGAAATGCATTT	NA	False	NA	NA	False	ACTAAA	-32	NA	46822956	46830394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_46823564_46823636_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ES.9137.1	chr13	+	1935	1	Antisense	novelGene_ENSMUSG00000021374.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGGCAGGGCACGAGTC	NA	False	NA	NA	False	NA	NA	NA	46850244	46852179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_46850200_46852200
ES.9138.1	chr13	-	9043	22	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-49	2921	combination_of_known_junctions	TRUE	canonical	3	5	junction_20	69.6865674794994	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATGAGCTCTTAGGA	NA	False	NA	NA	False	AATAAA	-25	NA	46881465	46830459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867310_46870576_46870800_46880835
ES.9138.10	chr13	-	6216	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-86	-21	-86	21	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTAGCTTCCTTGCTAG	NA	False	NA	-12	True	AATAAA	-22	NA	46881502	46833359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.100	chr13	-	5796	10	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-70	-1449	intron_retention	FALSE	canonical	0	0	junction_7	96.1179830555483	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881486	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866380_46867096_46867346_46870576_46870800_46880835
ES.9138.101	chr13	-	5872	10	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-69	-1449	intron_retention	FALSE	canonical	3	251	junction_2	31.3821526695165	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881485	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.102	chr13	-	7591	1	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-871	-1449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46862164	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46854600_46862200
ES.9138.103	chr13	-	2559	13	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-49	-1449	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	123.948550034099	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881465	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46855215_46857662_46857697_46858115_46858219_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.104	chr13	-	6522	8	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	0	-1449	intron_retention	FALSE	canonical	3	251	junction_2	32.2705400497426	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881416	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46867346_46870576_46870800_46880835
ES.9138.105	chr13	-	8374	9	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-40	-1449	intron_retention	FALSE	canonical	3	251	junction_1	26.191303423083	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881456	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.106	chr13	-	2546	12	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-46	21193	-46	-1449	5prime_fragment	FALSE	canonical	3	242	junction_1	31.7039507927288	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881462	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.107	chr13	-	7559	9	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-21	-1449	intron_retention	FALSE	canonical	3	255	junction_5	29.6721670930857	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881437	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46858692_46861222_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.108	chr13	-	5461	11	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-60	-1449	intron_retention	FALSE	canonical	3	251	junction_3	29.7739819305379	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881476	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.11	chr13	-	5734	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	721	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	70.9618402131731	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTAGCTTCCTTGCTA	NA	False	NA	-13	True	AATAAA	-21	NA	46880695	46833360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880509
ES.9138.110	chr13	-	2757	9	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-20	26790	-20	3217	5prime_fragment	FALSE	canonical	3	251	junction_1	26.191303423083	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTGTCCTACACTC	NA	False	NA	NA	False	AATAAA	-20	NA	46881436	46860170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.111	chr13	-	1948	9	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-37	27616	-37	2391	5prime_fragment	FALSE	canonical	3	251	junction_1	26.191303423083	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAGCAAAGTA	NA	False	NA	NA	False	NA	NA	NA	46881453	46860996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.12	chr13	-	5834	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	271	20	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	69.9983478910966	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTAGCTTCCTTGCTA	NA	False	NA	-13	True	AATAAA	-21	NA	46881145	46833360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858219_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.13	chr13	-	5883	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-34	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTTCTAGCTTCCTT	NA	False	NA	-17	True	AATAAA	-17	NA	46881450	46833364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881116_46881391
ES.9138.15	chr13	-	5736	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	82	12	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_4	65.4609332873285	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTACTTCTAGCTT	NA	False	NA	-21	True	AATAAA	-13	NA	46881334	46833368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840401_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.17	chr13	-	5868	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	154	12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	72.5271500887771	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTGTACTTCTAGCTT	NA	False	NA	-21	True	AATAAA	-13	NA	46881262	46833368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.18	chr13	-	6190	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-36	11	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	87.0067443001921	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTGTACTTCTAGCT	NA	False	NA	-22	True	AATAAA	-12	NA	46881452	46833369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.19	chr13	-	5240	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	65	10	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	67.0263194573594	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTGTACTTCTAGC	NA	False	NA	-23	True	AATAAA	-11	NA	46870678	46833370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837535_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576
ES.9138.2	chr13	-	8433	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	233	2911	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	68.7200116414425	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTTGATGAACAATGA	NA	False	NA	NA	False	AATAAA	-15	NA	46881183	46830469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.20	chr13	-	5915	20	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-30	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	73.7116490265688	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTGTACTTCTAGC	NA	False	NA	-23	True	AATAAA	-11	NA	46881446	46833370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.21	chr13	-	6161	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-37	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	70.4920831501529	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTGTACTTCTAG	NA	False	NA	-24	True	AATAAA	-10	NA	46881453	46833371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850251_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.22	chr13	-	6209	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-18	3	intron_retention	FALSE	canonical	3	242	junction_11	29.6789487684453	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCCTTTCTGTTTGTAC	NA	False	NA	-30	True	AATAAA	-4	NA	46881434	46833377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.23	chr13	-	5968	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-3	3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	70.0317606518642	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCCTTTCTGTTTGTAC	NA	False	NA	-30	True	AATAAA	-4	NA	46881419	46833377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.24	chr13	-	6221	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-8307	2	intron_retention	FALSE	canonical	1	1	junction_20	71.3553606956058	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACCCTTTCTGTTTGTA	NA	False	NA	-31	True	AATAAA	-3	NA	46889723	46833378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46889645
ES.9138.25	chr13	-	5883	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-36	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACCCTTTCTGTTTGTA	NA	False	NA	-31	True	AATAAA	-3	NA	46881452	46833378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881120_46881383
ES.9138.26	chr13	-	4738	9	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	2458	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.587332150683	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACCCTTTCTGTTTGTA	NA	False	NA	-31	True	AATAAA	-3	NA	46853148	46833378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46839317_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124
ES.9138.27	chr13	-	6118	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-57	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACCCTTTCTGTTTGTA	NA	False	NA	-31	True	AATAAA	-3	NA	46881473	46833378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46880985_46881034
ES.9138.28	chr13	-	5669	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	357	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	69.3304013074679	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAACCCTTTCTGTTTG	NA	False	NA	-33	True	AATAAA	-1	NA	46881059	46833380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46880958_46881040
ES.9138.29	chr13	-	5380	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-46	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	104.084737848837	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACGTACAACCCTT	NA	False	NA	-41	True	ATTAAA	-6	NA	46881462	46833388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836602_46840401_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.3	chr13	-	9039	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-21	-2909	-21	2909	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATGGTTGATGAACAAT	NA	False	NA	NA	False	AATAAA	-13	NA	46881437	46830471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.30	chr13	-	5677	20	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-26	-183	intron_retention	FALSE	canonical	2	9	junction_3	70.2267005752386	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATAGTGAAGGCACACAA	NA	False	NA	NA	False	AATAAA	-29	NA	46881442	46833563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.31	chr13	-	6018	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-96	187	-96	-187	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTCATAGTGAAGGCAC	NA	False	NA	NA	False	AATAAA	-25	NA	46881512	46833567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.32	chr13	-	7273	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-57	-192	intron_retention	FALSE	canonical	1	18	junction_1	67.6816075459205	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAGTTTTCATAGTGAA	NA	False	NA	NA	False	AATAAA	-20	NA	46881473	46833572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46835004_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.33	chr13	-	5934	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-45	-196	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	69.9983478910966	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881461	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858219_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.34	chr13	-	8421	7	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	795	-196	intron_retention	FALSE	canonical	3	279	junction_5	20.2155056000751	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46854811	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124
ES.9138.35	chr13	-	5792	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-24	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	93.6776921150388	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881440	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867348_46870576_46870800_46880835
ES.9138.36	chr13	-	5457	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-10	-196	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881426	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46880905_46881370
ES.9138.37	chr13	-	7864	10	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-2163	-196	intron_retention	FALSE	canonical	3	279	junction_7	22.2261107708929	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46857769	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46854564_46855079
ES.9138.39	chr13	-	5806	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	8	-196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	72.5271500887771	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881408	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.4	chr13	-	7082	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-49	-924	-49	924	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGCTGTCAGGTCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	46881465	46832456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.40	chr13	-	6699	21	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	9250	196	-1423	-196	3prime_fragment	FALSE	canonical	3	242	junction_11	31.2622376038568	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46872166	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576
ES.9138.44	chr13	-	5338	19	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	329	-196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	74.4052135436028	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881087	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.45	chr13	-	5434	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-8957	-196	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	70.7696272143242	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46890373	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46890271
ES.9138.46	chr13	-	5702	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-92	-196	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_4	65.4609332873285	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881508	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840401_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.47	chr13	-	5812	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-76	-196	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	65.4114485114944	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881492	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837535_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.49	chr13	-	6039	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-92	-196	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	87.0067443001921	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881508	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.5	chr13	-	6815	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-58	-648	-58	648	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTCTGTAAGACTATTC	NA	False	NA	NA	False	ATTAAA	-22	NA	46881474	46832732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.50	chr13	-	5870	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-36	-196	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881452	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881148_46881226
ES.9138.51	chr13	-	5942	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-30	-196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	70.6341858353077	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881446	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863494_46866098_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.52	chr13	-	5571	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	7	-196	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	115.002533739218	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881409	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837535_46837713_46840098_46840975_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.53	chr13	-	5905	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-52	-196	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	92.138390441755	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881468	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858219_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867310_46870576_46870800_46880835
ES.9138.55	chr13	-	5919	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-12	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	70.9576220499541	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881428	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840977_46842542_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.57	chr13	-	6611	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-85	-196	intron_retention	FALSE	canonical	3	242	junction_10	29.8563226134767	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881501	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.58	chr13	-	5663	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-36	-196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881452	46833576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881096_46881381
ES.9138.6	chr13	-	8979	19	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	132	640	intron_retention	FALSE	canonical	3	242	junction_9	29.9281547116498	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCTAGAGTCTGTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	46870611	46832740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576
ES.9138.60	chr13	-	6020	24	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	20	-198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	115.162595665666	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTAACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	46881396	46833578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880011_46880107_46880835
ES.9138.61	chr13	-	5450	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-8349	-198	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	70.7696272143242	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTTAACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	46889765	46833578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46889645
ES.9138.64	chr13	-	6417	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	8	-199	intron_retention	FALSE	canonical	3	15	junction_12	91.0737475895222	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881408	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.65	chr13	-	8851	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-40	-199	intron_retention	FALSE	canonical	3	251	junction_13	28.4666032395859	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881456	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.66	chr13	-	5320	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-8297	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	93.2301178551408	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46889713	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866380_46867096_46867346_46870576_46870800_46889645
ES.9138.67	chr13	-	5904	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-77	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881493	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46880958_46881040
ES.9138.69	chr13	-	5796	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-21	-199	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	94.8078451395242	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881437	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867310_46870576_46870800_46880835
ES.9138.7	chr13	-	6671	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-21	-541	-21	541	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAAATAATTTTGCT	NA	False	NA	NA	False	AATAGA	-21	NA	46881437	46832839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.70	chr13	-	5785	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	11	-199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.4516197796987	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881405	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858184_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881318_46881372
ES.9138.71	chr13	-	5951	22	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-77	-199	combination_of_known_junctions	FALSE	canonical	3	5	junction_20	69.6865674794994	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881493	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867310_46870576_46870800_46880835
ES.9138.74	chr13	-	5804	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	738	-199	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_20	94.0102521005023	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46880678	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880011
ES.9138.76	chr13	-	4228	1	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-317	-199	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46837807	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46833600_46837800
ES.9138.77	chr13	-	6074	24	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-52	-199	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	114.956636847933	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881468	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46853372_46853451_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.78	chr13	-	5674	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-30	-199	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881446	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881120_46881385
ES.9138.8	chr13	-	3496	7	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	538	415	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	112.270011826647	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGGTGAATGCTGG	NA	False	NA	NA	False	AATATA	-14	NA	46847043	46832965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837535_46837713_46840098_46840975_46842534_46842727_46846987
ES.9138.80	chr13	-	6412	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-49	-199	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_11	67.1462342953449	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881465	46833579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.81	chr13	-	7224	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-60	-200	intron_retention	FALSE	canonical	3	242	junction_10	31.3641515109209	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTTGTTAACAGTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	46881476	46833580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.82	chr13	-	5957	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-25	-201	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_10	69.2350166342485	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTGTTAACAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	46881441	46833581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855055_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.83	chr13	-	5508	21	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-97	-201	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	93.3859732508046	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTGTTAACAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	46881513	46833581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836602_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861371_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.84	chr13	-	8415	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-25	-201	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	67.3401693842421	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTGTTAACAGTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	46881441	46833581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.86	chr13	-	5612	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-60	-203	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	68.7200116414425	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATTTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	46881476	46833583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.87	chr13	-	5501	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	244	-203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	91.8239220087076	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATTTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	46881172	46833583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837517_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866110_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.89	chr13	-	5892	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-36	-203	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	69.3304013074679	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATTTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	46881452	46833583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46880985_46881034
ES.9138.9	chr13	-	6592	2	FSM	ENSMUSG00000021374.11	ENSMUST00000182156.2	597	2	-4803	-1192	-2741	22	multi-exon	FALSE	canonical	3	334	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGCTTCCTTGCTAGG	NA	False	NA	-11	True	AATAAA	-23	NA	46840231	46833358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999
ES.9138.91	chr13	-	5508	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	103	-203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.0450200406612	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAATTTGTTAACAGTT	NA	False	NA	NA	False	AATAAA	-9	NA	46881313	46833583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837425_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863498_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.93	chr13	-	5653	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-79	535	-79	-535	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATGTTAGACATATT	NA	False	NA	NA	False	CATAAA	-20	NA	46881495	46833915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.94	chr13	-	5111	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-28	1026	-28	144	multi-exon	FALSE	canonical	3	242	junction_11	30.6722857910241	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTATGATCCAGCACAT	NA	False	NA	NA	False	NA	NA	NA	46881444	46834406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.95	chr13	-	4946	19	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-49	497	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	70.3603818447095	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTAGGCTCTTGCTATT	NA	False	NA	NA	False	AATAAA	-15	NA	46881465	46835823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46836746_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.96	chr13	-	4458	18	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	-30	6265	-30	1014	5prime_fragment	FALSE	canonical	3	242	junction_7	28.2153115564648	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTGTTTGGTTGATG	NA	False	NA	NA	False	ATTAAA	-16	NA	46881446	46839645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ES.9138.97	chr13	-	3018	3	ISM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	26654	12956	844	906	intron_retention	FALSE	canonical	3	279	junction_1	22	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGGTATATCTTAGTTT	NA	False	NA	NA	False	AATACA	-10	NA	46854762	46846336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46847594_46850121_46850245_46853124
ES.9138.98	chr13	-	5350	1	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	1289	1225	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTCATTTGCATGGAA	NA	False	NA	NA	False	TTTAAA	-13	NA	46854317	46848967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46849000_46854300
ES.9138.99	chr13	-	4788	13	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-82	-1449	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	109.173282242294	420	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46881498	46854573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835_46881116_46881391
ES.9139.1	chr13	+	184	1	Intergenic	novelGene_7461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTTGACATCATCAG	NA	False	NA	NA	False	NA	NA	NA	47060260	47060444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_47060300_47060400
ES.914.1	chr1	-	178	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCCACAGAAATATA	7790	False	NA	NA	False	NA	NA	NA	86340226	86340048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86340000_86340200
ES.9140.1	chr13	-	8256	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	78	1365	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	17.3937765416628	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATCCTTAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	47083115	46901197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.10	chr13	-	7001	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	21.1576917027463	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	47083291	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46934101_46934141_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.13	chr13	-	6941	37	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	67	-3	intron_retention	FALSE	non_canonical	0	0	junction_35	19.9991319256056	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTGATCGTCTGTTC	NA	False	NA	-1	True	AATACA	-21	NA	47083126	46902565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904250_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.15	chr13	-	6965	37	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	45	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	18.0277563773199	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGTTGATCGTCTGTT	NA	False	NA	-2	True	AATACA	-20	NA	47083298	46902566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.16	chr13	-	3902	2	ISM	ENSMUSG00000021375.12	ENSMUST00000225836.2	649	3	-524	-1422	-524	-4	intron_retention	FALSE	canonical	3	7	junction_1	0	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGTTGATCGTCTGTT	NA	False	NA	-2	True	AATACA	-20	NA	46906543	46902566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46904103_46904177
ES.9140.17	chr13	-	4342	7	NIC	ENSMUSG00000021375.12	novel	3917	16	NA	NA	15351	-4	intron_retention	FALSE	canonical	3	34	junction_1	23.9443799947573	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTGTTGATCGTCTGTT	5448	False	NA	-2	True	AATACA	-20	NA	46924763	46902566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692
ES.9140.19	chr13	-	4219	17	NIC	ENSMUSG00000021375.12	novel	3917	16	NA	NA	9	3	intron_retention	FALSE	canonical	2	4	junction_1	22.0251986370157	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTGTTGATCGTCTGT	NA	False	NA	-3	True	AATACA	-19	NA	46941678	46902567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46904250_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533
ES.9140.2	chr13	-	5245	15	ISM	ENSMUSG00000021375.12	ENSMUST00000056978.8	6866	38	143015	-1360	-65	1360	3prime_fragment	FALSE	canonical	3	23	junction_2	17.7712218637496	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATATATATCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	46940179	46901202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988
ES.9140.22	chr13	-	6949	37	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-73	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	21.9966853563592	206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAAGTGTTGATCGTCT	NA	False	NA	-5	True	AATACA	-17	NA	47083267	46902569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924868_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932466_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.23	chr13	-	3969	1	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-521	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCAAAGTGTTGATCGT	NA	False	NA	-7	True	AATACA	-15	NA	46906540	46902571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46902600_46906500
ES.9140.25	chr13	-	2769	7	NNC	ENSMUSG00000021375.12	novel	3917	16	NA	NA	-14951	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	31.6578935215567	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCAAAGTGTTGATCGT	9241	False	NA	-7	True	AATACA	-15	NA	46920970	46902571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46920935
ES.9140.27	chr13	-	7039	39	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-73	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	23.5212080879554	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCAAAGTGTTGATCGT	NA	False	NA	-7	True	AATACA	-15	NA	47083267	46902571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46904177_46904250_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46934101_46934141_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47082680_47082783_47083042
ES.9140.29	chr13	-	6896	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-7	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	19.4191022955851	206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCAAAGTGTTGATCGT	NA	False	NA	-7	True	AATACA	-15	NA	47083201	46902571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944924_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47082691_47082783_47083042
ES.9140.3	chr13	-	7038	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	58	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	21.2220511859155	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTTGTTGTTGTTG	NA	False	NA	12	True	AATACA	-34	NA	47083285	46902552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46904177_46904250_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.33	chr13	-	7011	39	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_37	20.6263587649463	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCAAAGTGTTGATCG	NA	False	NA	-8	True	AATACA	-14	NA	47083173	46902572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46904177_46904250_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.34	chr13	-	4351	19	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	37	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.1324453604778	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCAAAGTGTTGATCG	NA	False	NA	-8	True	AATACA	-14	NA	46947487	46902572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914226_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366
ES.9140.36	chr13	-	4060	17	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-244	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	23.4454153300811	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGTCCAAAGTGTTGAT	NA	False	NA	-10	True	AATACA	-12	NA	46941931	46902574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46941838
ES.9140.37	chr13	-	6959	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-61	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	19.4191022955851	206	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGTCCAAAGTGTTGAT	NA	False	NA	-10	True	AATACA	-12	NA	47083255	46902574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944924_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.38	chr13	-	4940	22	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	6346	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.7665326154733	192	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGAGTCCAAAGTGTT	NA	False	NA	-13	True	AATACA	-9	NA	46956187	46902577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906337_46914744_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930688_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991
ES.9140.39	chr13	-	4609	29	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-6186	282	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	15.3048945085671	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATCTACGGTATGTC	NA	False	NA	NA	False	TATAAA	-23	NA	46968719	46903706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685
ES.9140.4	chr13	-	7452	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-333	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	17.3937765416628	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	47083676	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.40	chr13	-	4148	17	NIC	ENSMUSG00000021375.12	novel	3917	16	NA	NA	49	280	intron_retention	FALSE	canonical	2	6	junction_14	28.954436188605	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTATCTACGGTATG	NA	False	NA	NA	False	TATAAA	-21	NA	46940065	46903708	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46904103_46904177_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46934101_46934141_46938721_46938869_46939988
ES.9140.41	chr13	-	6204	36	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	2	-776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	20.3223813484904	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTCTTGACACTACA	NA	False	NA	NA	False	NA	NA	NA	47083341	46904764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944924_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.42	chr13	-	6375	36	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-109	-776	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	18.2812494549102	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTCTTGACACTACA	NA	False	NA	NA	False	NA	NA	NA	47083452	46904764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.43	chr13	-	6310	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-73	-816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	17.5546314117649	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	47083267	46904804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018362_47082691_47082783_47083042
ES.9140.44	chr13	-	6244	37	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-62	-816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	17.63142886866	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	47083256	46904804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.46	chr13	-	5108	1	Intergenic	novelGene_7459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGATTTCTAGGTCA	NA	False	NA	NA	False	NA	NA	NA	46912956	46907848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_46907800_46913000
ES.9140.51	chr13	-	4892	37	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	-61	-9366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	19.167310778227	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATGCCAGTTTTTCA	NA	False	NA	-19	True	AATAAA	-22	NA	47083255	46913354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.53	chr13	-	4886	38	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	15	-9366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_35	20.9704303279004	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATGCCAGTTTTTCA	NA	False	NA	-19	True	AATAAA	-22	NA	47083178	46913354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47009520_47009594_47082681_47082783_47083042
ES.9140.54	chr13	-	5506	37	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	56	-9368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_36	19.7884646532603	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGAAATGCCAGTTTTT	NA	False	NA	-21	True	AATAAA	-20	NA	47083287	46913356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980251_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082781_47083042
ES.9140.56	chr13	-	4903	38	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	-73	-9368	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	16.9234515990337	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGAAATGCCAGTTTTT	NA	False	NA	-21	True	AATAAA	-20	NA	47083267	46913356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
ES.9140.57	chr13	-	5388	36	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	36	-9372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6796797717434	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTATGAAATGCCAGT	NA	False	NA	-25	True	AATAAA	-16	NA	47083157	46913360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46914244_46914748_46914901_46916814_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.59	chr13	-	2178	19	NNC	ENSMUSG00000021375.12	novel	686	6	NA	NA	126	-9378	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	26.8794749360829	171	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACAAAACCTATGAAAT	NA	False	NA	-31	True	AATAAA	-10	NA	46947398	46913366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46934101_46934141_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366
ES.9140.6	chr13	-	6876	37	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	20.291623887703	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	47083157	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952620_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.60	chr13	-	3678	25	NIC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	-4088	-10030	combination_of_known_junctions	FALSE	canonical	3	45	junction_20	13.7800177390629	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGCTCTTGGTAATG	NA	False	NA	NA	False	AAGAAA	-35	NA	46966621	46914018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204
ES.9140.61	chr13	-	4869	35	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	88	-10335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	17.596004579524	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATGCATGTACTTGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	47083105	46914323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.62	chr13	-	5901	1	FSM	ENSMUSG00000064558.3	ENSMUST00000082624.3	130	1	-4444	-1327	-4444	1327	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAAGAAATACAG	4642	False	NA	NA	False	NA	NA	NA	46925569	46919668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_46919700_46925600
ES.9140.63	chr13	-	3601	25	NNC	ENSMUSG00000021375.12	novel	707	3	NA	NA	42	-3900	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	16.928567242649	160	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	47083151	46936282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46936609_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.64	chr13	-	3824	22	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-406	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	13.6924429229148	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATTTCACTTTACAT	NA	False	NA	NA	False	AATAAA	-23	NA	47083749	46941302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.65	chr13	-	5592	10	ISM	ENSMUSG00000021375.12	ENSMUST00000225591.2	3426	26	80293	15348	-6355	-6417	internal_fragment	FALSE	canonical	3	30	junction_9	8.78129324821299	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGAGGGATGCAAGGGC	NA	False	NA	NA	False	NA	NA	NA	46968888	46947727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685
ES.9140.66	chr13	-	2704	20	NNC	ENSMUSG00000021375.12	novel	501	3	NA	NA	-74	4913	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.7836155429193	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCTCTGACCGACAGCA	NA	False	NA	NA	False	AATAAA	-16	NA	47083268	46951078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46951159_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.67	chr13	-	2741	19	NNC	ENSMUSG00000021375.12	novel	501	3	NA	NA	59	3761	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.0833107497592	114	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATTGGTGTAAGTCAC	NA	False	NA	NA	False	AATAAA	-16	NA	47083284	46952230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46952482_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.68	chr13	-	2194	15	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-15	-6078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	14.8936707554393	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTGGAAGAGTGAAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	47083209	46962069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001865_47082681_47082783_47083042
ES.9140.69	chr13	-	172	1	Intergenic	novelGene_7460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGGGGTCTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	46991966	46991794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_46991800_46992000
ES.9140.7	chr13	-	3976	15	NNC	ENSMUSG00000021375.12	novel	3917	16	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	25.2210634354764	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	46940215	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914242_46914748_46914901_46916823_46916930_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988
ES.9140.70	chr13	-	176	1	Intergenic	novelGene_7462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47066326	47066150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_47066200_47066300
ES.9140.71	chr13	-	4291	2	ISM	ENSMUSG00000021375.12	ENSMUST00000224923.2	703	3	66	24153	66	-24153	5prime_fragment	FALSE	canonical	3	54	junction_1	0	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTTACGTTCCTTAGG	NA	False	NA	NA	False	NA	NA	NA	47083277	47078726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47082783_47083042
ES.9140.8	chr13	-	7067	38	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_36	17.3937765416628	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	47083287	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47082675_47082783_47083042
ES.9140.9	chr13	-	4916	23	NNC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-7395	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	27.985681108514	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	46954919	46902562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926425_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46934101_46934141_46938721_46938869_46939988_46940122_46941531_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756
ES.9141.1	chr13	-	3556	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	21	-1283	21	1283	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGATAAATTATCACCAT	NA	False	NA	NA	False	NA	NA	NA	47168305	47164749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47164700_47168300
ES.9141.2	chr13	-	2298	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	-5	1	-5	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTGGAAACGTGTCT	NA	False	NA	-2	True	AATAAA	-17	NA	47168331	47166033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47166000_47168300
ES.9142.1	chr13	+	212	1	Intergenic	novelGene_7463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATCAAGAAGGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	47181205	47181417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_47181200_47181400
ES.9143.1	chr13	-	5770	9	NNC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	30	505	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	46.0672063403024	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCCTCTTAGACTTCAC	NA	False	NA	NA	False	AATAAA	-25	NA	47196656	47175452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47179676_47179923_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ES.9143.10	chr13	-	1917	2	NIC	ENSMUSG00000021376.12	novel	881	9	NA	NA	0	14	intron_retention	FALSE	canonical	3	68	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGAAAAGGAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	47196600	47193159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47195056_47196579
ES.9143.2	chr13	-	1488	9	NIC	ENSMUSG00000021376.12	novel	838	7	NA	NA	-3	493	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	49.6814854850376	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGACTTCACAATCCT	NA	False	NA	NA	False	AATAAA	-13	NA	47196689	47175464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47176200_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
ES.9143.3	chr13	-	2682	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	18	8	18	-8	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	False	NA	NA	False	AATAAA	-8	NA	47196668	47177026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ES.9143.4	chr13	-	5154	8	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	2	-8	intron_retention	FALSE	canonical	3	68	junction_7	23.1358013935642	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	False	NA	NA	False	AATAAA	-8	NA	47196612	47177026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ES.9143.5	chr13	-	2574	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	-23	-68	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATCAACCTATATGGAA	NA	False	NA	NA	False	AAGAAA	-18	NA	47196643	47177086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
ES.9143.6	chr13	-	3719	6	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	4157	1634	2528	2	3prime_fragment	FALSE	canonical	3	106	junction_1	11.0815161417561	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTAGCCATGGTTTCTG	NA	False	NA	0	True	ATTAAA	-19	NA	47192529	47178652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370
ES.9143.7	chr13	-	2557	8	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	39	1636	-27	0	intron_retention	FALSE	canonical	3	106	junction_1	10.9935045757549	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196647	47178654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874
ES.9143.8	chr13	-	1028	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196665	47178654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
ES.9143.9	chr13	-	1005	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	67	1636	1	0	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196619	47178654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ES.9144.1	chr13	+	4350	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	-33	670	-33	-4	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTTCCAGTCCTTTAA	1128	False	NA	14	True	AATAAA	-24	NA	47196941	47238085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.10	chr13	+	2745	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	42	2200	-29	-1517	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGAAAATGTAAACCCAT	1203	False	NA	NA	False	AGTAAA	-19	NA	47197016	47236555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.11	chr13	+	2155	13	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	46	16177	-25	-3181	5prime_fragment	FALSE	canonical	3	35	junction_2	9.55212309152031	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAGAATATGAAATC	1207	False	NA	NA	False	AATATA	-5	NA	47197020	47222578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939
ES.9144.12	chr13	+	3871	21	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-25	-2162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	15.4223052751526	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAAGTTAGGTTTTGT	1207	False	NA	NA	False	AATAAA	-21	NA	47197020	47235910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47234575
ES.9144.13	chr13	+	4083	20	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-18	4	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	14.6402851795484	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	1214	False	NA	5	True	AATAAA	-15	NA	47197027	47238076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.14	chr13	+	3609	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	62	1316	-9	-633	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCTTTAAACAATTC	1223	False	NA	NA	False	AATATA	-11	NA	47197036	47237439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.15	chr13	+	4339	22	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-8	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	18.9725903258746	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACCTCCTTTCCAG	1224	False	NA	6	True	AATAAA	-16	NA	47197037	47238077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47197147_47198378_47198472_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.16	chr13	+	6045	19	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-7	1	intron_retention	FALSE	canonical	3	5	junction_11	14.8595274337899	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTCAACCTCCTTT	1225	False	NA	2	True	AATAAA	-12	NA	47197038	47238073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.17	chr13	+	4153	20	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	19.6742164327774	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCAACCTCCTTTCC	1234	False	NA	4	True	AATAAA	-14	NA	47197047	47238075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227228_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.18	chr13	+	4180	21	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	15.6153770367545	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTCAACCTCCTTT	1244	False	NA	2	True	AATAAA	-12	NA	47197057	47238073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227228_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.19	chr13	+	4227	21	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.5482314106782	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCAGTCCTTTAAGCT	1248	False	NA	17	True	AATAAA	-27	NA	47197061	47238088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216439_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.20	chr13	+	4033	19	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	5606	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	15.7170191626156	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTCAACCTCCTTT	984	False	NA	2	True	AATAAA	-12	NA	47202651	47238073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225369_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.21	chr13	+	5188	19	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	5712	-506	5641	506	3prime_fragment	FALSE	canonical	3	39	junction_10	9.07921245292961	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAACATTAAGTTCACTAA	1019	False	NA	NA	False	ATTAAA	-18	NA	47202686	47239261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.22	chr13	+	6529	8	ISM	ENSMUSG00000038080.18	ENSMUST00000128977.3	2876	10	1479	13	1479	4	3prime_fragment	FALSE	canonical	3	48	junction_1	9.16292440618547	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCAACCTCCTTTCCA	NA	False	NA	5	True	AATAAA	-15	NA	47221412	47238076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.23	chr13	+	3276	1	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	13297	-1566	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGGGGACTCTGTGAC	4727	False	NA	NA	False	NA	NA	NA	47233230	47236506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47233200_47236500
ES.9144.5	chr13	+	5225	19	NNC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-34	0	intron_retention	FALSE	canonical	0	0	junction_8	19.273534595462	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGTGTCAACCTCCTT	1198	False	NA	1	True	AATAAA	-11	NA	47197011	47238072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216439_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47234065_47236350
ES.9144.6	chr13	+	3269	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	37	1681	-34	-998	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATACAGGATGTTTTCAA	1198	False	NA	NA	False	AATACA	-21	NA	47197011	47237074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.7	chr13	+	6043	19	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-31	-4	intron_retention	FALSE	canonical	3	5	junction_11	15.0157324903656	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTTTCCAGTCCTTTAA	1201	False	NA	14	True	AATAAA	-24	NA	47197014	47238085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.8	chr13	+	4226	20	NIC	ENSMUSG00000038080.18	novel	4987	21	NA	NA	-31	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	15.6886253058998	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTGTCAACCTCCTTT	1201	False	NA	2	True	AATAAA	-12	NA	47197014	47238073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9144.9	chr13	+	5196	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	40	-249	-31	249	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGTTTTTAAAAATACAAA	1201	False	NA	NA	False	AATAAA	-19	NA	47197014	47239004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ES.9145.1	chr13	+	4236	2	Antisense	novelGene_ENSMUSG00000021377.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCCGTGAGGGATGCGT	6911	False	NA	NA	False	NA	NA	NA	47254535	47259011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_47255208_47255447
ES.9145.2	chr13	+	3715	1	Antisense	novelGene_ENSMUSG00000021377.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAATGACAG	6911	False	NA	NA	False	NA	NA	NA	47254535	47258250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_47254500_47258200
ES.9146.1	chr13	-	185	1	Intergenic	novelGene_7464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	47212034	47211849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_47211800_47212000
ES.9147.1	chr13	-	4974	12	Antisense	novelGene_ENSMUSG00000038080.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACCACTCCTTCCAAGA	NA	False	NA	NA	False	NA	NA	NA	47234808	47212965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_47214457_47216432_47216617_47217527_47217707_47218046_47218130_47220925_47221059_47221939_47222110_47225362_47225492_47227182_47227318_47227827_47227903_47230856_47230974_47231741_47231867_47232655
ES.9147.2	chr13	-	7302	7	Antisense	novelGene_ENSMUSG00000038080.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47228515	47212989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_47214457_47216432_47216617_47217527_47217707_47218046_47218130_47220925_47225492_47227182_47227318_47227827
ES.9148.10	chr13	-	3438	9	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_6	504.905049860862	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259659	47238257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
ES.9148.13	chr13	-	4702	9	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	1684	2	1324	-2	3prime_fragment	FALSE	canonical	3	1428	junction_1	71.2179752590594	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47257982	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448
ES.9148.14	chr13	-	3570	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-6	-2	intron_retention	FALSE	canonical	3	1333	junction_9	119.54151094706	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259683	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.15	chr13	-	2500	11	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	611.886394684504	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259637	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242088_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255530_47259047_47259214_47259548
ES.9148.16	chr13	-	2514	11	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-83	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_10	474.633342697287	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259389	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259311
ES.9148.17	chr13	-	3997	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-78	-2	intron_retention	FALSE	canonical	3	1333	junction_9	114.169897223825	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259755	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.18	chr13	-	5088	9	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-4	-2	intron_retention	FALSE	canonical	3	1333	junction_8	125.178872019203	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259670	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47241650_47241952_47242092_47251630_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.19	chr13	-	2084	12	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	457.034078335884	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259658	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47238532_47238993_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.2	chr13	-	3190	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	-552	-82	-541	75	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTAGTTTTGTATGCTG	NA	False	NA	67	True	NA	NA	NA	47260218	47238175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.22	chr13	-	2436	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	3	61	junction_7	480.043233649678	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259658	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
ES.9148.23	chr13	-	6367	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	13	-2	intron_retention	FALSE	canonical	1	2	junction_5	625.874400684433	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259646	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47246593_47246690_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47259214_47259548
ES.9148.24	chr13	-	2533	10	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	500.42115596099	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCTTGTATTTAATCT	NA	False	NA	-17	True	AATAAA	-18	NA	47259322	47238259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239958_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
ES.9148.25	chr13	-	4173	7	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	3663	-3	intron_retention	FALSE	canonical	1	1	junction_5	579.273515323768	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	False	NA	-18	True	AATAAA	-17	NA	47255643	47238260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47252037_47252818_47252940_47253649
ES.9148.27	chr13	-	2484	11	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	474.493930414289	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	False	NA	-18	True	AATAAA	-17	NA	47259659	47238260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255160_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.28	chr13	-	4053	2	ISM	ENSMUSG00000021377.16	ENSMUST00000138401.2	1946	5	9256	10	9155	-3	intron_retention	FALSE	canonical	3	1428	junction_1	0	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	False	NA	-18	True	AATAAA	-17	NA	47242658	47238260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47239556_47239900
ES.9148.3	chr13	-	2434	10	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-98	6	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_9	645.420066102996	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTGTCTGCTTAAGTG	NA	False	NA	-2	True	AATAAA	-33	NA	47259404	47238244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259311
ES.9148.31	chr13	-	2399	10	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	638.46571492587	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTCTTGTATTTAAT	NA	False	NA	-19	True	AATAAA	-16	NA	47259652	47238261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251791_47252818_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
ES.9148.32	chr13	-	3638	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-17	-5	intron_retention	FALSE	canonical	1	2	junction_5	656.236407266636	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCTTGTATTTAA	NA	False	NA	-20	True	AATAAA	-15	NA	47259323	47238262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47246593_47246690_47251630_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047
ES.9148.35	chr13	-	4945	8	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	-13	-8	intron_retention	FALSE	canonical	3	61	junction_5	531.194341622187	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAAGTGTCTTGTATT	NA	False	NA	-23	True	AATAAA	-12	NA	47259643	47238265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47241650_47241952_47242092_47251630_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
ES.9148.36	chr13	-	2537	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	-6	25	5	-25	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAATAAATCAATGT	NA	False	NA	-40	True	CATAAA	-8	NA	47259672	47238282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.38	chr13	-	2454	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	1	-25	combination_of_known_splicesites	FALSE	canonical	2	40	junction_1	488.277496491746	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAATAAATCAATGT	NA	False	NA	-40	True	CATAAA	-8	NA	47259658	47238282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ES.9148.4	chr13	-	6138	4	ISM	ENSMUSG00000021377.16	ENSMUST00000138401.2	1946	5	5353	-6	5252	6	3prime_fragment	FALSE	canonical	3	1428	junction_1	83.4279462903302	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTGTCTGCTTAAGTG	NA	False	NA	-2	True	AATAAA	-33	NA	47246561	47238244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952
ES.9148.7	chr13	-	4140	9	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	1333	junction_8	118.037533755158	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259656	47238257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47255551_47259047_47259214_47259548
ES.9148.8	chr13	-	7733	5	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	1018	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	673.181764087531	983	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47250795	47238257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47244823_47247448
ES.9148.9	chr13	-	8390	3	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	4518	0	intron_retention	FALSE	canonical	3	1428	junction_1	92	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47247295	47238257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_47239556_47239900_47241650_47241952
ES.9149.1	chr13	+	4540	7	NIC	ENSMUSG00000038068.16	novel	4640	8	NA	NA	-2	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.19722101554181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTAGCCTTTGTTCTGT	NA	False	NA	NA	False	AATAAA	-19	NA	47276129	47401470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_47276350_47360835_47361027_47382415_47382477_47390878_47391078_47393192_47393338_47396339_47396430_47397836
ES.9149.3	chr13	+	4609	8	FSM	ENSMUSG00000038068.16	ENSMUST00000068891.12	4640	8	31	0	31	0	multi-exon	FALSE	canonical	1	1	junction_6	2.49079939630896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTAGCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	47276162	47401467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_47276350_47360835_47361027_47373969_47374075_47382415_47382477_47390878_47391078_47393192_47393338_47396339_47396430_47397836
ES.915.1	chr1	+	272	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTTCTGGCCTGGCA	NA	False	NA	NA	False	NA	NA	NA	86383516	86383788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86383500_86383800
ES.9150.1	chr13	-	208	1	Intergenic	novelGene_7465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATATTTAGAAGAAAGAT	NA	False	NA	NA	False	AATAAA	-5	NA	47561321	47561113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_47561100_47561300
ES.9151.1	chr13	+	3615	1	Intergenic	novelGene_7466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48047931	48051546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_48047900_48051500
ES.9152.1	chr13	+	1493	2	Antisense	novelGene_ENSMUSG00000114860.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTCTAAGAAGTTACGTG	NA	False	NA	NA	False	AGTAAA	-15	NA	48399283	48404378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_48399462_48403063
ES.9153.1	chr13	+	1666	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-232	2415	-232	-2415	multi-exon	FALSE	canonical	3	109	junction_1	7	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTGTCTGTTTTTTTA	NA	False	NA	6	True	ATTAAA	-15	NA	48414471	48417087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.10	chr13	+	1460	4	NNC	ENSMUSG00000021379.3	novel	3849	3	NA	NA	-111	-2419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.9808047311868	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTATGTGTCTGTTTT	NA	False	NA	2	True	ATTAAA	-11	NA	48414592	48417083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_48415415_48415760_48415824_48416427_48416654_48416734
ES.9153.11	chr13	+	1770	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-93	2172	-93	-2172	multi-exon	FALSE	canonical	3	109	junction_1	7	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCTTTCTTTAACCT	NA	False	NA	NA	False	AATAAA	-19	NA	48414610	48417330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.2	chr13	+	4071	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-220	-2	-220	2	multi-exon	FALSE	canonical	3	109	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAAGTTTGTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	48414483	48419504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.3	chr13	+	2271	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-147	1725	-147	-1725	multi-exon	FALSE	canonical	3	109	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAAAATCCTTCAA	NA	False	NA	NA	False	NA	NA	NA	48414556	48417777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.4	chr13	+	2453	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-112	1508	-112	-1508	multi-exon	FALSE	canonical	3	109	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGATGTGATTTCTTA	NA	False	NA	8	True	ATTAAA	-27	NA	48414591	48417994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.5	chr13	+	2745	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	1215	-111	-1215	multi-exon	FALSE	canonical	3	109	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGACTTTTTATGAAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	48414592	48418287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.6	chr13	+	1081	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	2879	-111	-2879	multi-exon	FALSE	canonical	3	109	junction_1	7	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTTTTGCACGTTCACG	NA	False	NA	NA	False	AATAAA	-17	NA	48414592	48416623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.7	chr13	+	3128	4	NNC	ENSMUSG00000021379.3	novel	3849	3	NA	NA	-111	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.9808047311868	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAAGTTTGTGGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	48414592	48419503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_48415415_48415760_48415824_48416427_48416654_48417486
ES.9153.8	chr13	+	1908	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	2052	-111	-2052	multi-exon	FALSE	canonical	3	109	junction_1	7	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTTTTATTATTATTA	NA	False	NA	NA	False	TATAAA	-13	NA	48414592	48417450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9153.9	chr13	+	2075	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	1885	-111	-1885	multi-exon	FALSE	canonical	3	109	junction_1	7	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTTCATATCTGTACA	NA	False	NA	NA	False	ACTAAA	-12	NA	48414592	48417617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_48415415_48415760_48415824_48416427
ES.9154.1	chr13	-	656	3	FSM	ENSMUSG00000097326.3	ENSMUST00000180777.3	672	3	14	2	14	-2	multi-exon	FALSE	canonical	3	15	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTTTGTATGTGTGA	NA	False	NA	-1	True	ATTAAA	-13	NA	48427346	48425890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48426292_48426385_48426533_48427238
ES.9154.2	chr13	-	737	3	NNC	ENSMUSG00000097326.3	novel	672	3	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGAGTTCTCTTTGTA	NA	False	NA	-8	True	ATTAAA	-6	NA	48427346	48425897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48426292_48426388_48426624_48427238
ES.9155.1	chr13	-	2391	7	NNC	ENSMUSG00000050954.16	novel	4175	4	NA	NA	4	59725	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.84754619472471	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAACAAAGACAACTTCA	NA	False	NA	NA	False	GGGGCT	-27	NA	48666923	48581397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48581657_48582607_48584308_48630119_48630181_48651798_48651895_48652255_48652383_48660382_48660470_48666862
ES.9155.2	chr13	-	829	6	NNC	ENSMUSG00000050954.16	novel	4175	4	NA	NA	-7	48101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.82934843158555	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAATTGTTTAG	NA	False	NA	NA	False	NA	NA	NA	48666919	48593021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48593423_48630119_48630181_48651798_48651895_48652255_48652383_48660382_48660470_48666862
ES.9155.3	chr13	-	3950	6	NNC	ENSMUSG00000050954.16	novel	4145	5	NA	NA	-10	4596	intron_retention	FALSE	non_canonical	0	0	junction_1	7.49933330370107	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTGTGTTTGATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	48666937	48636526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48636789_48641658_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666770
ES.9155.4	chr13	-	3844	6	NNC	ENSMUSG00000050954.16	novel	417	5	NA	NA	2	4567	intron_retention	FALSE	non_canonical	0	0	junction_1	6.82934843158555	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATATTAAAAACAGAAAAAA	NA	False	NA	NA	False	AATGAA	-7	NA	48666925	48636555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48636813_48641658_48644873_48651798_48651895_48652255_48652383_48660382_48660470_48666862
ES.9155.6	chr13	-	4139	5	NIC	ENSMUSG00000050954.16	novel	4145	5	NA	NA	-22	-5	intron_retention	FALSE	canonical	0	0	junction_1	6.68487097856047	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAATTCCATCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	48666949	48641127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666862
ES.9156.1	chr13	-	1399	1	Genic_Genomic	ENSMUSG00000097375.4	novel	NA	NA	NA	NA	13272	1075	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAATTGAAACATGG	NA	False	NA	NA	False	NA	NA	NA	48686704	48685305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_48685300_48686700
ES.9157.1	chr13	-	176	1	Intergenic	novelGene_7467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGATGTAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	48718345	48718169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_48718200_48718300
ES.9158.1	chr13	+	177	1	Intergenic	novelGene_7468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGGCATTATAGGT	NA	False	NA	NA	False	NA	NA	NA	48757099	48757276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_48757100_48757300
ES.9159.1	chr13	-	5550	3	FSM	ENSMUSG00000038042.12	ENSMUST00000221887.2	1072	3	-2987	-1491	-2987	2	multi-exon	TRUE	canonical	3	14	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTCTTGTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	48740025	48731345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48733320_48734230_48734342_48736560
ES.9159.10	chr13	-	2955	5	NIC	ENSMUSG00000038042.12	novel	1873	7	NA	NA	-7	-2867	intron_retention	FALSE	canonical	3	9	junction_3	3.83242742918897	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAGTTTTCATAGATA	NA	False	NA	NA	False	AATATA	-10	NA	48779147	48742312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_48742734_48743762_48743882_48744101_48746134_48759748_48759837_48778852
ES.9159.2	chr13	-	4411	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	-7	-2	-7	2	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTCTTGTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	48779147	48731345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
ES.9159.3	chr13	-	6554	1	Genic_Genomic	ENSMUSG00000038042.12	novel	NA	NA	NA	NA	-861	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTCTTGTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	48737899	48731345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_48731300_48737900
ES.9159.4	chr13	-	4584	11	FSM	ENSMUSG00000038042.12	ENSMUST00000222028.2	3164	11	-82	-1338	1	0	multi-exon	FALSE	canonical	0	0	junction_8	6.6340033162488	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCCGTCTTGTGGTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	48779139	48731347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48751233_48751417_48759748_48759837_48778852
ES.9159.5	chr13	-	6101	9	NIC	ENSMUSG00000038042.12	novel	4402	10	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	9	junction_7	4.04467242184086	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACCCCGTCTTGTGGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	48779061	48731348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48746134_48759748_48759837_48778852
ES.9159.6	chr13	-	3074	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	0	1328	0	10	multi-exon	FALSE	canonical	3	9	junction_8	3.87138919781874	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAAGCCTTTTGTTCTTC	NA	False	NA	NA	False	AATACA	-25	NA	48779140	48732675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
ES.9159.9	chr13	-	3961	4	NIC	ENSMUSG00000038042.12	novel	1873	7	NA	NA	21	-2862	intron_retention	FALSE	canonical	3	9	junction_2	3.85861230093008	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTCATAGATACTGAT	NA	False	NA	NA	False	AATATA	-15	NA	48779119	48742307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_48743882_48744101_48746134_48759748_48759837_48778852
ES.916.1	chr1	+	1383	7	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-59020	-14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	10720.7182284273	4239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGTCTCAAAGCCTGG	NA	False	NA	43	True	AATAAA	-32	NA	86395427	86458420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86395575_86395790_86395960_86396889_86396980_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.11	chr1	+	1107	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	-15	-324	-5	-17	multi-exon	FALSE	canonical	3	33	junction_2	10628.523175347	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
ES.916.12	chr1	+	1110	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-5	111	-5	-111	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	4206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTTGCTGTTTATTTT	NA	False	NA	12	True	GATAAA	-31	NA	86454442	86458323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.13	chr1	+	770	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-5	451	-5	52	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	4173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATTTGTTTGTATTTT	NA	False	NA	NA	False	TTTAAA	-2	NA	86454442	86457983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.14	chr1	+	1415	4	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-17	intron_retention	FALSE	canonical	3	20058	junction_2	1765.57494570151	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86454673_86456894_86457275_86457452_86457527_86457686
ES.916.15	chr1	+	3980	1	Genic_Genomic	ENSMUSG00000026238.15	novel	NA	NA	NA	NA	-5	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	4207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_86454400_86458400
ES.916.18	chr1	+	760	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	48	at_least_one_novel_splicesite	FALSE	canonical	1	204	junction_3	9352.54701605397	4173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAAATTTGTTTGTA	NA	False	NA	NA	False	AAAAAG	-45	NA	86454442	86457979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457269_86457452_86457527_86457686
ES.916.19	chr1	+	1201	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-16	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGTGTCTCAAAGCCT	NA	False	NA	41	True	AATAAA	-30	NA	86454442	86458418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457460_86457527_86457686
ES.916.2	chr1	+	2560	2	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACAAAGCAAAGGTCAGA	NA	False	NA	NA	False	NA	NA	NA	86395436	86398212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86395575_86395790
ES.916.20	chr1	+	3604	3	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-17	intron_retention	FALSE	canonical	3	19621	junction_1	2230	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457177_86457527_86457686
ES.916.21	chr1	+	3431	4	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-12	intron_retention	FALSE	canonical	3	19621	junction_1	2007.4056778727	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454442	86458422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.22	chr1	+	1131	4	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-16	combination_of_known_splicesites	FALSE	canonical	2	984	junction_3	9049.33862531155	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGTGTCTCAAAGCCT	NA	False	NA	41	True	AATAAA	-30	NA	86454442	86458418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86454673_86456894_86456967_86457177_86457275_86457686
ES.916.24	chr1	+	1753	2	ISM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-5	17	-5	-17	intron_retention	FALSE	canonical	3	20695	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86454673_86456894
ES.916.25	chr1	+	1176	4	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9512.68242342237	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457282_86457647
ES.916.26	chr1	+	1196	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-5	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8722.60083060093	4207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454442	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457519_86457686
ES.916.29	chr1	+	1198	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-16	at_least_one_novel_splicesite	FALSE	canonical	1	204	junction_3	9352.54701605397	4207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGTGTCTCAAAGCCT	NA	False	NA	41	True	AATAAA	-30	NA	86454443	86458418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457269_86457452_86457527_86457686
ES.916.3	chr1	+	344	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	86395573	86395917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86395600_86395900
ES.916.31	chr1	+	1592	3	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	-4	-17	intron_retention	FALSE	canonical	3	20695	junction_1	1693	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454443	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86454673_86456894_86457527_86457686
ES.916.32	chr1	+	3641	3	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-12	intron_retention	FALSE	canonical	3	20058	junction_1	2011.5	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTCAAAGCCTGGTT	NA	False	NA	45	True	AATAAA	-34	NA	86454443	86458422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86457275_86457452_86457527_86457686
ES.916.33	chr1	+	1173	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-17	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	9439.51567547297	4207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454443	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457269_86457476_86457527_86457686
ES.916.34	chr1	+	1162	6	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	8590.17096453848	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454443	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686_86458361_86458401
ES.916.37	chr1	+	3752	2	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-4	-28	intron_retention	FALSE	canonical	3	19621	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGTTCTAACAATGGT	NA	False	NA	29	True	AATAAA	-18	NA	86454443	86458406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457177
ES.916.4	chr1	+	210	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	86401939	86402149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86401900_86402100
ES.916.40	chr1	+	3490	2	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	-3	-14	intron_retention	FALSE	canonical	3	33	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTGTCTCAAAGCCTGG	NA	False	NA	43	True	AATAAA	-32	NA	86454444	86458420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457452
ES.916.42	chr1	+	1170	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	-2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9365.72429126547	4207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATGGTGTCTCAAAGC	NA	False	NA	39	True	AATAAA	-28	NA	86454445	86458416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454643_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.43	chr1	+	1217	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	9477.80256705108	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454447	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86454673_86456894_86456967_86457159_86457275_86457452_86457527_86457686
ES.916.44	chr1	+	3812	2	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	-15	intron_retention	FALSE	canonical	3	24081	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTCTCAAAGCCTG	NA	False	NA	42	True	AATAAA	-31	NA	86454447	86458419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86457527_86457686
ES.916.46	chr1	+	931	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	1	284	1	57	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	4194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACCTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	86454448	86458150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.916.48	chr1	+	3223	2	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	12	-17	intron_retention	FALSE	canonical	1	2	junction_1	0	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454474	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457686
ES.916.49	chr1	+	3279	3	NIC	ENSMUSG00000026238.15	novel	768	4	NA	NA	30	-17	intron_retention	FALSE	canonical	3	33	junction_1	12024	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTGTCTCAAAGCC	NA	False	NA	40	True	AATAAA	-29	NA	86454492	86458417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86456967_86457452_86457527_86457686
ES.916.5	chr1	+	167	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAACAGAGGTT	NA	False	NA	NA	False	NA	NA	NA	86404084	86404251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86404100_86404300
ES.916.6	chr1	+	2761	1	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCAAACATTTAAATAAAT	1537	False	NA	NA	False	NA	NA	NA	86415485	86418246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86415500_86418200
ES.916.7	chr1	+	1633	1	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAACATCAAGCCA	1858	False	NA	NA	False	NA	NA	NA	86415806	86417439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86415800_86417400
ES.916.8	chr1	+	1993	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-777	0	-777	0	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86453670	86458434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ES.9160.1	chr13	+	178	1	Intergenic	novelGene_7469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGCCATGACTTCT	NA	False	NA	NA	False	NA	NA	NA	48804840	48805018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_48804800_48805000
ES.9161.1	chr13	+	3857	1	Genic_Genomic	ENSMUSG00000086889.2	novel	NA	NA	NA	NA	-528	-1020	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATAAGTTAGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	49024059	49027916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_49024100_49027900
ES.9161.2	chr13	+	3115	2	ISM	ENSMUSG00000086889.2	ENSMUST00000123212.2	498	3	-124	1059	-124	-1059	5prime_fragment	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49024463	49027877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49024680_49024978
ES.9162.1	chr13	-	5720	22	FSM	ENSMUSG00000038025.9	ENSMUST00000035540.9	5494	22	-224	-2	-224	2	multi-exon	TRUE	canonical	3	26	junction_1	5.86043268042677	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGTCGTGCTTGC	NA	False	NA	2	True	AGTAAA	-25	NA	49024819	48955223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
ES.9162.2	chr13	-	5892	20	NIC	ENSMUSG00000038025.9	novel	5494	22	NA	NA	341	0	intron_retention	FALSE	canonical	3	27	junction_10	5.90178150482953	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTCTGTCGTGCTT	NA	False	NA	0	True	AGTAAA	-23	NA	49024254	48955225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
ES.9162.4	chr13	-	5135	22	NNC	ENSMUSG00000038025.9	novel	5494	22	NA	NA	-582	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	9.24005870150489	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTGTCTGTCGTGCT	NA	False	NA	-1	True	AGTAAA	-22	NA	49025177	48955226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49025083
ES.9162.5	chr13	-	5334	21	NNC	ENSMUSG00000038025.9	novel	5494	22	NA	NA	246	-1	intron_retention	FALSE	canonical	0	0	junction_8	9.43649829120951	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCATGTGTCTGTCGTGCT	NA	False	NA	-1	True	AGTAAA	-22	NA	49024349	48955226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967521_48969430_48969542_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
ES.9163.1	chr13	+	2099	2	Antisense	novelGene_ENSMUSG00000038014.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49034025	49082366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_49036055_49082296
ES.9164.1	chr13	+	1548	1	Antisense	novelGene_ENSMUSG00000038014.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	49084575	49086123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_49084600_49086100
ES.9165.1	chr13	+	1204	1	Intergenic	novelGene_7471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49093571	49094775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49093600_49094800
ES.9165.2	chr13	+	4586	1	Intergenic	novelGene_7472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAATGTCCATGAATGTC	NA	False	NA	NA	False	NA	NA	NA	49093571	49098157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49093600_49098200
ES.9166.1	chr13	+	1464	2	Intergenic	novelGene_7474	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCTTTCCCTGTTTAA	NA	False	NA	13	True	AATAAA	-20	NA	49121587	49123384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49122081_49122413
ES.9166.2	chr13	+	1416	3	Intergenic	novelGene_7475	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	41	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGCTTTCCCTGTTTA	NA	False	NA	12	True	AATAAA	-19	NA	49121592	49123383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49122081_49122413_49122767_49122808
ES.9166.3	chr13	+	391	2	Intergenic	novelGene_7476	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTCTTTTAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	49121813	49122537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49122081_49122413
ES.9166.4	chr13	+	1462	2	Intergenic	novelGene_7477	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGCTTGCTTTCCCTG	NA	False	NA	8	True	AATAAA	-15	NA	49121875	49123379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49122767_49122808
ES.9167.1	chr13	-	5849	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-739	-5	-739	5	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGGCTTTTAAATTC	5644	False	NA	-13	True	AATAAA	-26	NA	49122232	49032689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.10	chr13	-	5018	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-204	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_18	63.6872179357449	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6179	False	NA	-18	True	AATAAA	-21	NA	49121697	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830_49121336_49121626
ES.9167.11	chr13	-	4372	1	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	84427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6856	False	NA	-18	True	AATAAA	-21	NA	49037066	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49032700_49037100
ES.9167.12	chr13	-	6746	6	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	65589	0	intron_retention	FALSE	canonical	3	190	junction_3	37.8766418786038	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6537	False	NA	-18	True	AATAAA	-21	NA	49055904	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49034572_49038748_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533
ES.9167.14	chr13	-	5022	17	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-265	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	63.3033063413752	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6118	False	NA	-18	True	AATAAA	-21	NA	49121758	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034405_49039296_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.17	chr13	-	5165	18	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-259	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	97.278112347375	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTATGGTGTGGCTTTT	6124	False	NA	-19	True	AATAAA	-20	NA	49121752	49032695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49062202_49062252_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49120830
ES.9167.2	chr13	-	8597	17	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-244	3	intron_retention	FALSE	canonical	3	179	junction_7	32.3553873991643	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	6139	False	NA	-15	True	AATAAA	-24	NA	49121737	49032691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49034572_49038748_49038846_49039212_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.20	chr13	-	4740	17	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	266	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	66.1503672986779	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTATGGTGTGGCTTT	6649	False	NA	-20	True	AATAAA	-19	NA	49121227	49032696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.21	chr13	-	5260	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-75	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	81.659051043249	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTATGGTGTGGCTTT	6308	False	NA	-20	True	AATAAA	-19	NA	49121568	49032696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49095563_49095646_49099417_49099501_49102532_49102780_49120830
ES.9167.22	chr13	-	5002	18	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	65.09811599334	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	6414	False	NA	-21	True	AATAAA	-18	NA	49121462	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120899
ES.9167.23	chr13	-	5159	18	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-21	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	65.5117728926889	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	6362	False	NA	-21	True	AATAAA	-18	NA	49121514	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075763_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.24	chr13	-	5431	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-273	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	95.0410567551508	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	6110	False	NA	-21	True	AATAAA	-18	NA	49121766	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49049797_49049853_49051135_49051251_49055533_49055784_49063731_49063908_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.25	chr13	-	4238	16	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	638	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	67.3306930175401	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	7021	False	NA	-21	True	AATAAA	-18	NA	49120855	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49099417_49099501_49102532_49102780_49120830
ES.9167.26	chr13	-	5440	20	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-253	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	93.4684386863871	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	6130	False	NA	-21	True	AATAAA	-18	NA	49121746	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49061452_49061489_49062202_49062252_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.27	chr13	-	5416	18	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-230	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	65.5117728926889	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTATGGTGTGGCTT	6153	False	NA	-21	True	AATAAA	-18	NA	49121723	49032697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075073_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.28	chr13	-	4878	17	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-30	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_16	66.6731474714521	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGTATAAAGTATGGT	6353	False	NA	-28	True	AATAAA	-11	NA	49121523	49032704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49120830
ES.9167.29	chr13	-	3525	12	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	46053	262	46053	-262	3prime_fragment	FALSE	canonical	3	179	junction_8	36.1594266026358	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTCTTATGTTTCAT	2692	False	NA	NA	False	NA	NA	NA	49075440	49032956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157
ES.9167.3	chr13	-	5432	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-272	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	81.8443456420799	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGTGGCTTTTAAAT	6111	False	NA	-15	True	AATAAA	-24	NA	49121765	49032691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49062202_49062255_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.30	chr13	-	4632	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-37	510	-37	-510	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTGTGCATTATTGT	6346	False	NA	NA	False	NA	NA	NA	49121530	49033204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.32	chr13	-	4169	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-61	997	-61	-997	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTGCTGTTGTGCTGA	6322	False	NA	NA	False	AAAAAG	-31	NA	49121554	49033691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.33	chr13	-	9017	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-294	24406	-294	-24406	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAATGTCTGTTCTGAGT	6089	False	NA	NA	False	NA	NA	NA	49121787	49057100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.34	chr13	-	6592	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-229	26766	-229	-26766	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAAGAAGAGCTGGTAC	6154	False	NA	NA	False	NA	NA	NA	49121722	49059460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.35	chr13	-	6460	11	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-259	-26766	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.2899731288457	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAAGAAGAGCTGGTAC	6124	False	NA	NA	False	NA	NA	NA	49121752	49059460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49060633_49060794_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.37	chr13	-	10987	1	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	51046	-26766	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAAGAAGAGCTGGTAC	7685	False	NA	NA	False	NA	NA	NA	49070447	49059460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49059500_49070400
ES.9167.38	chr13	-	6359	10	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-12	-26773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	80.4162013035854	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTTTTAAGAAGAG	6371	False	NA	NA	False	NA	NA	NA	49121505	49059467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49063907_49066332_49066561_49068337_49068417_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.40	chr13	-	6169	11	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-3	-26801	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	76.2899731288457	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAACA	6380	False	NA	NA	False	NA	NA	NA	49121496	49059495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49060616_49060777_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.41	chr13	-	2023	2	Intergenic	novelGene_7470	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAACA	761	False	NA	NA	False	NA	NA	NA	49061680	49059495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49060613_49060774
ES.9167.42	chr13	-	6114	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-259	27274	-259	-27274	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTACTCTGGACTTTT	6124	False	NA	NA	False	NA	NA	NA	49121752	49059968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.43	chr13	-	5573	11	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-219	-27613	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	76.2899731288457	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCCTGTATTTATGAA	6164	False	NA	NA	False	AATAAA	-24	NA	49121712	49060307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49060633_49060794_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.44	chr13	-	2793	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-68	30404	-68	-30404	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGTACAGAAGTGTTA	6315	False	NA	NA	False	ATTAAA	-15	NA	49121561	49063098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.45	chr13	-	2617	10	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-286	30798	-286	-30798	5prime_fragment	FALSE	canonical	3	223	junction_3	19.2725737452327	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGACGACATTACTCT	6097	False	NA	NA	False	AATAAA	-20	NA	49121779	49063492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.46	chr13	-	4203	10	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-230	-31517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	79.1285873331082	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTCTGGTGTTATCT	6153	False	NA	NA	False	AATAAA	-31	NA	49121723	49064211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49065052_49065116_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.47	chr13	-	4060	9	ISM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	-36	31531	-36	-31531	5prime_fragment	FALSE	canonical	3	223	junction_2	19.5284247956664	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTTCTGTATTTGTT	6347	False	NA	NA	False	AATAAA	-17	NA	49121529	49064225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.48	chr13	-	3036	1	Intergenic	novelGene_7473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGAGCAGTGTGGTAG	NA	False	NA	NA	False	NA	NA	NA	49112532	49109496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49109500_49112500
ES.9167.49	chr13	-	2729	1	Genic_Genomic	ENSMUSG00000038014.8	novel	NA	NA	NA	NA	-261	-86331	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTATTTTACCTGCTT	6122	False	NA	NA	False	NA	NA	NA	49121754	49119025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_49119000_49121800
ES.9167.7	chr13	-	5387	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-424	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	63.6872179357449	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	5959	False	NA	-18	True	AATAAA	-21	NA	49121917	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830_49121203_49121344
ES.9167.8	chr13	-	5301	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	96.2975712166315	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6348	False	NA	-18	True	AATAAA	-21	NA	49121528	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042237_49042403_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066557_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ES.9167.9	chr13	-	5520	19	NNC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	81.2225262192214	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6123	False	NA	-18	True	AATAAA	-21	NA	49121753	49032694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49093992_49094148_49099417_49099501_49102532_49102780_49120830
ES.9168.1	chr13	+	183	1	Intergenic	novelGene_7478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTTTTTCTAGTCT	NA	False	NA	NA	False	NA	NA	NA	49134236	49134419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49134200_49134400
ES.9169.1	chr13	+	209	1	Intergenic	novelGene_7479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGCCACGGAGTAGCA	NA	False	NA	NA	False	AAAACA	-8	NA	49145354	49145563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49145400_49145600
ES.917.1	chr1	-	358	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAGGAAAAAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	86399537	86399179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86399200_86399500
ES.9170.1	chr13	-	176	1	Intergenic	novelGene_7480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATTGTTCTGTTGGGG	NA	False	NA	NA	False	NA	NA	NA	49149407	49149231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49149200_49149400
ES.9171.1	chr13	-	178	1	Intergenic	novelGene_7481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTCTTTTA	7806	False	NA	NA	False	NA	NA	NA	49176165	49175987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49176000_49176200
ES.9172.1	chr13	+	153	1	Intergenic	novelGene_7482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	49186567	49186720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49186600_49186700
ES.9173.1	chr13	+	173	1	Intergenic	novelGene_7484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGGGGAAAAAAAGTAAGTA	NA	False	NA	NA	False	NA	NA	NA	49274744	49274917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49274700_49274900
ES.9174.1	chr13	+	176	1	Intergenic	novelGene_7485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAGAAATAAGGCAC	NA	False	NA	NA	False	NA	NA	NA	49296550	49296726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49296600_49296700
ES.9175.1	chr13	-	5582	25	NIC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	3.50297492616395	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTATTTCAAACTTCC	7756	False	NA	NA	False	AATAAA	-23	NA	49301481	49189777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49301237
ES.9175.10	chr13	-	2717	5	ISM	ENSMUSG00000037989.16	ENSMUST00000162403.8	6147	26	89899	1302	3550	-2	internal_fragment	FALSE	canonical	1	2	junction_2	4.60977222864644	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCAGCTTTTGTTC	5206	False	NA	NA	False	AATAAA	-20	NA	49210809	49191086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49192680_49196103_49196343_49204832_49205004_49206034_49206250_49210310
ES.9175.11	chr13	-	7546	25	NIC	ENSMUSG00000037989.16	novel	6897	29	NA	NA	3	-2	intron_retention	FALSE	canonical	1	1	junction_13	3.13581462037113	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCAGCTTTTGTTC	7752	False	NA	NA	False	AATAAA	-20	NA	49301485	49191086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49192680_49196103_49196343_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027_49300711_49301237
ES.9175.12	chr13	-	1696	4	NNC	ENSMUSG00000037989.16	novel	4360	19	NA	NA	9492	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.71547606649408	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTGTGAAATGGCAG	7500	False	NA	NA	False	AATAAA	-11	NA	49204867	49191095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49192406_49192567_49192680_49196103_49196343_49204832
ES.9175.13	chr13	-	675	1	Intergenic	novelGene_7483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTGCAAGGAGAAAATC	5913	False	NA	NA	False	NA	NA	NA	49210102	49209427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49209400_49210100
ES.9175.2	chr13	-	6498	28	NNC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	3.39247937705318	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGTATTTCAAACTTC	7756	False	NA	NA	False	AATAAA	-22	NA	49301481	49189778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49189982_49192567_49192680_49196103_49196343_49204832_49205004_49206034_49206250_49210310_49210991_49211087_49211174_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49225977_49226258_49229826_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027_49300711_49301237
ES.9175.3	chr13	-	5512	25	NIC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	-24780	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	3.13138237134266	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGTATTTCAAACTTC	NA	False	NA	NA	False	AATAAA	-22	NA	49256319	49189778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49225977_49226272_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265
ES.9175.4	chr13	-	5436	25	NIC	ENSMUSG00000037989.16	novel	6147	26	NA	NA	573	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	3.48184776934445	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGACTTTGGTATTTCA	9102	False	NA	NA	False	AATAAA	-16	NA	49300135	49189784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49206034_49206250_49210310_49210991_49211087_49211174_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027
ES.9175.5	chr13	-	6322	27	NIC	ENSMUSG00000037989.16	novel	6882	30	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	3.27894484399186	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGACTTTGGTATTTCA	7737	False	NA	NA	False	AATAAA	-16	NA	49301500	49189784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49197849_49197895_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027_49300711_49301237
ES.9175.6	chr13	-	6455	27	NIC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	3.27894484399186	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGACTTTGGTATTTC	7729	False	NA	NA	False	AATAAA	-15	NA	49301508	49189785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49204832_49205004_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221548_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265_49256439_49300027_49300711_49301237
ES.9175.7	chr13	-	5771	26	NIC	ENSMUSG00000037989.16	novel	6738	28	NA	NA	-24901	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	3.31058907144937	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGGACTTTGGTATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	49256440	49189785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49189982_49192567_49192680_49196103_49196343_49204832_49205004_49206034_49206250_49210310_49210991_49211087_49211177_49213826_49213903_49214176_49214998_49220722_49220843_49221392_49221439_49221574_49221720_49224245_49224363_49224430_49224600_49225466_49225517_49225977_49226272_49229612_49230141_49231534_49231727_49232146_49232303_49235379_49235580_49238725_49239018_49244292_49244513_49245711_49245801_49248816_49248975_49254438_49254660_49256265
ES.9175.8	chr13	-	5413	3	ISM	ENSMUSG00000037989.16	ENSMUST00000159559.8	6584	29	99499	1	13150	-1	intron_retention	FALSE	canonical	3	12	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGGACTTTGGTATTT	9088	False	NA	NA	False	AATAAA	-14	NA	49201209	49189786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49189982_49192567_49192680_49196103
ES.9175.9	chr13	-	11726	1	NIC	ENSMUSG00000037989.16	novel	6628	28	NA	NA	11549	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCAGCTTTTGTTCTT	9557	False	NA	NA	False	AATAAA	-22	NA	49202810	49191084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49191100_49202800
ES.9176.1	chr13	-	5828	4	Intergenic	novelGene_7486	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGAAGCACGTGCCCAT	NA	False	NA	NA	False	AATAAA	-16	NA	49331088	49322542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49323595_49325589_49325745_49325829_49325885_49326522
ES.9176.2	chr13	-	1445	5	Intergenic	novelGene_7487	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAATGAAGCACGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	49334316	49322546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49323595_49325589_49325745_49325829_49325885_49326522_49326583_49334189
ES.9177.1	chr13	+	1234	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	-36	-11	-36	11	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGCCACCCTATACTCT	NA	False	NA	24	True	AATAAA	-26	NA	49340924	49349731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
ES.9177.2	chr13	+	1391	5	FSM	ENSMUSG00000037966.16	ENSMUST00000120733.8	1321	5	-70	0	-30	0	multi-exon	FALSE	canonical	0	0	junction_1	186.87077754427	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	False	NA	13	True	AATAAA	-15	NA	49340930	49349720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49341114_49344560_49344735_49347211_49347441_49348369_49348534_49349079
ES.9177.3	chr13	+	2141	3	NIC	ENSMUSG00000037966.16	novel	1187	4	NA	NA	-23	2	intron_retention	FALSE	canonical	3	395	junction_2	1.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCCATGTGCCACC	NA	False	NA	15	True	AATAAA	-17	NA	49340937	49349722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49341114_49347211_49348534_49349079
ES.9177.4	chr13	+	1078	1	Genic_Genomic	ENSMUSG00000037966.16	novel	NA	NA	NA	NA	-14	-6376	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCCAGGTCCATATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	49340946	49342024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_49340900_49342000
ES.9177.5	chr13	+	1245	4	FSM	ENSMUSG00000037966.16	ENSMUST00000131280.2	706	4	-52	-487	-1	2	multi-exon	FALSE	canonical	2	4	junction_2	185.030327844443	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTTCCATGTGCCACC	NA	False	NA	15	True	AATAAA	-17	NA	49340959	49349722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49341114_49347211_49347441_49348314_49348534_49349079
ES.9177.7	chr13	+	7286	3	NIC	ENSMUSG00000037966.16	novel	1098	4	NA	NA	7	8	intron_retention	FALSE	canonical	3	352	junction_1	21.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTGCCACCCTATAC	NA	False	NA	21	True	AATAAA	-23	NA	49340967	49349728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49347441_49348369_49348534_49349079
ES.9177.9	chr13	+	2304	2	NIC	ENSMUSG00000037966.16	novel	1187	4	NA	NA	3107	8	intron_retention	FALSE	canonical	3	395	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTGCCACCCTATAC	5292	False	NA	21	True	AATAAA	-23	NA	49346878	49349728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49348534_49349079
ES.9178.1	chr13	+	5464	1	Antisense	novelGene_ENSMUSG00000037960.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGCATTACACCTCAGC	NA	False	NA	NA	False	NA	NA	NA	49358335	49363799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_49358300_49363800
ES.9179.1	chr13	-	939	6	NIC	ENSMUSG00000037960.12	novel	937	7	NA	NA	55	6	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	138.488411067497	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGAATGTCTTCTCCTTG	NA	False	NA	0	True	ATTAAA	-20	NA	49369447	49356419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369229
ES.9179.10	chr13	-	822	6	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	151.672014557729	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369450	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369342
ES.9179.11	chr13	-	456	2	ISM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	2	4828	2	59	5prime_fragment	FALSE	canonical	3	362	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAGGAGGAAAGGTCT	NA	False	NA	NA	False	NA	NA	NA	49369500	49361254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49361623_49369412
ES.9179.2	chr13	-	809	6	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	151.727914373065	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGAATGTCTTCTCCTTG	NA	False	NA	0	True	ATTAAA	-20	NA	49369514	49356419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49356712_49357193_49357266_49357418_49357465_49358667_49358822_49361479_49361623_49369412
ES.9179.3	chr13	-	4803	3	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	2	0	intron_retention	FALSE	canonical	3	362	junction_2	7.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369500	49356425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49356712_49357193_49361623_49369412
ES.9179.4	chr13	-	3622	4	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	362	junction_3	12.657891697365	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369523	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49356712_49357193_49357465_49358667_49361623_49369412
ES.9179.5	chr13	-	849	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	-45	0	-34	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369547	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
ES.9179.6	chr13	-	742	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	158.076721878966	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369500	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49356712_49357193_49357266_49358667_49358822_49361479_49361623_49369412
ES.9179.7	chr13	-	1013	7	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.939067735269	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369470	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49356712_49357193_49357266_49357404_49357465_49358195_49358437_49358667_49358822_49361479_49361623_49369412
ES.9179.8	chr13	-	963	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	-9	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369522	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
ES.9179.9	chr13	-	808	5	NNC	ENSMUSG00000037960.12	novel	804	6	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	161.537147430552	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369471	49356426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49356712_49357193_49357361_49358667_49358822_49361479_49361623_49369412
ES.918.1	chr1	-	360	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86412915	86412555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86412600_86412900
ES.9180.1	chr13	-	952	4	NIC	ENSMUSG00000021384.15	novel	1418	5	NA	NA	-6	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	5.8878405775519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGTAGCCACCTTAT	NA	False	NA	0	True	AATAAA	-12	NA	49401636	49384308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49384808_49390899_49391089_49392264_49392413_49401520
ES.9180.2	chr13	-	1093	5	FSM	ENSMUSG00000021384.15	ENSMUST00000058196.13	1418	5	182	143	42	-4	multi-exon	FALSE	canonical	2	5	junction_4	5.02493781056044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGTAGCCACCTTAT	NA	False	NA	0	True	AATAAA	-12	NA	49401588	49384308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49384808_49390899_49391089_49392264_49392413_49393958_49394148_49401520
ES.9181.1	chr13	+	3032	1	Antisense	novelGene_ENSMUSG00000037946.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGATTTTGTCTAAGA	NA	False	NA	NA	False	NA	NA	NA	49412238	49415270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_49412200_49415300
ES.9182.1	chr13	+	6373	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	-57	-7	-57	0	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1371	False	NA	18	True	AATAAA	-25	NA	49495003	49540502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
ES.9182.10	chr13	+	5986	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	-16	339	-16	-339	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATCATCTGTATGGGGT	1412	False	NA	NA	False	NA	NA	NA	49495044	49540156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
ES.9182.11	chr13	+	5102	19	Fusion	ENSMUSG00000021385.11_ENSMUSG00000037933.17	novel	4588	8	NA	NA	-11	-10	intron_retention	FALSE	canonical	1	2	junction_7	53.4524422290218	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGCAACATCCTATAGAG	1417	False	NA	1	True	NA	NA	NA	49495049	49616456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602774_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.12	chr13	+	4489	9	FSM	ENSMUSG00000037933.17	ENSMUST00000110084.4	4488	9	-1	0	-1	0	multi-exon	FALSE	canonical	1	2	junction_1	16.5562488203095	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGTGCCCTCTGTGATTG	1433	False	NA	17	True	AATAAA	-24	NA	49495065	49540501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495118_49495221_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.13	chr13	+	4247	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-5	346	0	-339	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATCATCTGTATGGGGT	1434	False	NA	NA	False	NA	NA	NA	49495066	49540156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.14	chr13	+	5467	5	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	34729	5	-6764	2	3prime_fragment	FALSE	canonical	3	30	junction_4	10.4283268073071	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACATGCGTGCCCTCTGTG	NA	False	NA	13	True	AATAAA	-20	NA	49529800	49540497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.15	chr13	+	3640	4	NIC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-3673	-23	intron_retention	FALSE	canonical	2	2	junction_3	22.2910046630673	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAGAATAATAAAACAA	NA	False	NA	-12	True	NA	NA	NA	49532891	49540472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49533510_49534046_49534199_49536518_49536730_49537813
ES.9182.16	chr13	+	4134	2	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	38974	3	-2519	-2	intron_retention	FALSE	canonical	3	52	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCGTGCCCTCTGTGAT	NA	False	NA	15	True	AATAAA	-22	NA	49534045	49540499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49534199_49536518
ES.9182.17	chr13	+	2129	3	NNC	ENSMUSG00000037933.17	novel	4488	9	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	15	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGTGCCCTCTGTGATTG	NA	False	NA	17	True	AATAAA	-24	NA	49536618	49540501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49536730_49538446_49538700_49538736
ES.9182.18	chr13	+	4518	1	Genic_Genomic	ENSMUSG00000037933.17	novel	NA	NA	NA	NA	387	967	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATATAGCTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	49536951	49541469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_49537000_49541500
ES.9182.19	chr13	+	4478	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-56	-1	-56	1	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATGACATTTTCAACTG	NA	False	NA	NA	False	ATTAAA	-30	NA	49574668	49618050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.20	chr13	+	2890	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-53	1584	-53	-1	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATAGAGTTTGTTAAA	NA	False	NA	10	True	NA	NA	NA	49574671	49616465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.22	chr13	+	1699	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-22	2744	-22	-1072	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACTTGGCTGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	49574702	49615305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.23	chr13	+	5689	12	ISM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-14	1587	-14	-4	intron_retention	FALSE	canonical	3	101	junction_9	16.5494500670162	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTATAGAGTTTGTT	NA	False	NA	7	True	NA	NA	NA	49574710	49616462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088
ES.9182.24	chr13	+	3949	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	-6	478	-6	-478	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTCATGTCTGAAGGAT	NA	False	NA	NA	False	AATATA	-14	NA	49574718	49617571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.25	chr13	+	2860	13	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	5	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.3703870597319	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGCAACATCCTATAG	NA	False	NA	-1	True	NA	NA	NA	49574729	49616454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587408_49587515_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.26	chr13	+	823	7	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	8	-24836	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	51.3173676470473	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTCTTC	NA	False	NA	NA	False	NA	NA	NA	49574732	49591541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49591351
ES.9182.27	chr13	+	2044	7	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	12	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.0775114546851	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTATAGAGTTTGTT	NA	False	NA	7	True	NA	NA	NA	49574765	49616462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590268_49615009
ES.9182.3	chr13	+	4633	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-45	0	-34	0	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1394	False	NA	18	True	AATAAA	-25	NA	49495026	49540502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.4	chr13	+	5594	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	-39	-967	-28	967	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATATAGCTGTCTCCT	1400	False	NA	NA	False	NA	NA	NA	49495032	49541469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.5	chr13	+	5179	19	Fusion	ENSMUSG00000021385.11_ENSMUSG00000037933.17	novel	4588	8	NA	NA	-23	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	54.4806285654717	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCTATAGAGTTTGTT	1405	False	NA	7	True	NA	NA	NA	49495037	49616462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_49495387_49522904_49523118_49528692_49528845_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49584344_49584393_49585845_49585942_49587304_49587372_49588947_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ES.9182.6	chr13	+	4129	9	NNC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-20	2	intron_retention	FALSE	non_canonical	0	0	junction_5	17.0729134889157	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACATGCGTGCCCTCTGTG	1408	False	NA	13	True	AATAAA	-20	NA	49495040	49540497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49532567_49533051_49533510_49534046_49534199_49536518_49536730_49538446
ES.9182.8	chr13	+	4703	9	NIC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-18	-1	intron_retention	FALSE	canonical	0	0	junction_8	20.4110111214511	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTGCCCTCTGTGATT	1410	False	NA	16	True	AATAAA	-23	NA	49495042	49540500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49537813_49537902_49538446
ES.9182.9	chr13	+	4541	8	NNC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	-17	-3	intron_retention	FALSE	non_canonical	0	0	junction_7	18.1096433889094	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCGTGCCCTCTGTGA	1411	False	NA	14	True	AATAAA	-21	NA	49495043	49540498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536683_49538470
ES.9183.1	chr13	+	5220	1	Intergenic	novelGene_7491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAATAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	49634323	49639543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49634300_49639500
ES.9184.1	chr13	+	2443	1	FSM	ENSMUSG00000113255.2	ENSMUST00000222404.2	3272	1	895	-66	895	66	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTAGTTTCCTTTGTTG	NA	False	NA	NA	False	ATTAAA	-12	NA	49647688	49650131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49647700_49650100
ES.9185.1	chr13	+	173	1	Intergenic	novelGene_7493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAACAAAGACTATG	NA	False	NA	NA	False	NA	NA	NA	49760984	49761157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49761000_49761200
ES.9186.1	chr13	+	8505	1	NIC	ENSMUSG00000021390.7	novel	2566	7	NA	NA	7950	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTTCTAGTATGCCTA	3133	False	NA	NA	False	AATAAA	-34	NA	49769471	49777976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49769500_49778000
ES.9187.1	chr13	+	176	1	Intergenic	novelGene_7494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTGGACAAAG	NA	False	NA	NA	False	NA	NA	NA	49795276	49795452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49795300_49795500
ES.9188.1	chr13	+	1367	1	Intergenic	novelGene_7495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGGCCCCTTAACT	NA	False	NA	NA	False	NA	NA	NA	49804105	49805472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49804100_49805500
ES.9189.1	chr13	-	1212	1	Intergenic	novelGene_7488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGTCTTTTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	49574534	49573322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49573300_49574500
ES.919.1	chr1	-	178	1	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACTGGACATG	5005	False	NA	NA	False	NA	NA	NA	86421218	86421040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86421000_86421200
ES.9190.1	chr13	-	1457	1	Intergenic	novelGene_7489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAGGCTACAGTTTCAC	NA	False	NA	NA	False	NA	NA	NA	49594765	49593308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49593300_49594800
ES.9191.1	chr13	-	278	1	Intergenic	novelGene_7490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCCAGAGCTCAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	49599347	49599069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49599100_49599300
ES.9192.1	chr13	-	6687	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	1	5205	intron_retention	FALSE	canonical	3	162	junction_5	23.8793262514298	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACCTGTGAAAACAAGTA	NA	False	NA	NA	False	AAAAAG	-24	NA	49806242	49612293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ES.9192.10	chr13	-	3463	1	Intergenic	novelGene_7492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGGAAGGAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	49640475	49637012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49637000_49640500
ES.9192.11	chr13	-	1704	4	NNC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	5179	-20093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.0528933998639	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGCTTTGATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	49801064	49637591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49639087_49780730_49780828_49794701_49794791_49801041
ES.9192.12	chr13	-	3721	2	Antisense	novelGene_ENSMUSG00000043631.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-35	NA	49682631	49678862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49680890_49680937
ES.9192.13	chr13	-	2910	7	NNC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	1	13867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.4042673927298	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAAGGTTGTATAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	49806242	49698503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_49700673_49702427_49702531_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ES.9192.2	chr13	-	3103	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	1	1621	intron_retention	FALSE	canonical	3	162	junction_5	23.8793262514298	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGAGTGGTGTCC	NA	False	NA	NA	False	CATAAA	-21	NA	49806242	49615877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ES.9192.3	chr13	-	2746	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	19	-1621	1	1621	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGAGTGGTGTCC	NA	False	NA	NA	False	CATAAA	-21	NA	49806242	49615877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ES.9192.4	chr13	-	1242	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	-96	-2	-96	2	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGCTTTGTACAGTTAA	NA	False	NA	-2	True	AATAAA	-23	NA	49806357	49617496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ES.9192.6	chr13	-	3996	3	ISM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	183514	4	183496	-4	3prime_fragment	FALSE	canonical	3	186	junction_1	25	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATAGTGCTTTGTAC	NA	False	NA	-8	True	AATAAA	-17	NA	49622747	49617502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_49617814_49618170_49618263_49619154
ES.9192.7	chr13	-	996	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	37	-4	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	68.711959172573	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATAGTGCTTTGTAC	NA	False	NA	-8	True	AATAAA	-17	NA	49806206	49617502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
ES.9192.8	chr13	-	1414	6	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	20	junction_4	74.7518561642452	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTATAGTGCTTTGTAC	NA	False	NA	-8	True	AATAAA	-17	NA	49806267	49617502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
ES.9192.9	chr13	-	2211	4	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	-1	-5	intron_retention	FALSE	canonical	1	4	junction_2	88.458402025409	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTATAGTGCTTTGTA	NA	False	NA	-9	True	AATAAA	-16	NA	49806262	49617503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_49619235_49780730_49780828_49803596_49803776_49806058
ES.9193.1	chr13	+	3346	7	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	-61	1987	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	53.7393400282016	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	49806492	49816610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429
ES.9193.10	chr13	+	4546	16	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56.4139462662676	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTCTTTTATTTAAAA	NA	False	NA	22	True	ATTAAA	-15	NA	49806589	49832491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.100	chr13	+	6789	32	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-8	intron_retention	FALSE	canonical	1	41	junction_13	376.378421167999	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835619	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861885_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.104	chr13	+	4371	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	375.337837414074	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTGGAAGTAGTTAT	NA	False	NA	26	True	ATTAAA	-27	NA	49835619	49887739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873060_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.108	chr13	+	4381	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	375.187059558614	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835619	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860288_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.109	chr13	+	4364	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	canonical	1	50	junction_1	366.603585858582	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835619	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840867_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.11	chr13	+	4203	18	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	53.107255839832	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAATATTTGTGTTTAT	NA	False	NA	-2	True	AATAAA	-4	NA	49806589	49832446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806682_49807042_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.110	chr13	+	4471	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	455.801124642002	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGGAAGTAGTTATTCT	NA	False	NA	29	True	ATTAAA	-30	NA	49835619	49887742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49838353_49838444_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.112	chr13	+	5613	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-12	intron_retention	FALSE	non_canonical	0	0	junction_19	466.628389310956	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835619	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871385_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879728_49880602_49880780_49882134_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.118	chr13	+	5242	11	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-2559	intron_retention	FALSE	canonical	3	1400	junction_1	122.436269136233	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGTGGTCGATACATAA	NA	False	NA	NA	False	NA	NA	NA	49835619	49862698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49859362_49860154_49860282_49861881
ES.9193.120	chr13	+	4364	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	466.866598258356	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTGGAAGTAGTTAT	NA	False	NA	26	True	ATTAAA	-27	NA	49835619	49887739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846641_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873060_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.125	chr13	+	4370	34	NNC	ENSMUSG00000037851.14	novel	4396	34	NA	NA	17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	429.735596844842	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49835622	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861885_49861956_49863054_49863250_49865225_49865307_49868286_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.128	chr13	+	7178	32	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	22	-8	intron_retention	FALSE	canonical	1	598	junction_15	247.843430990453	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835627	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.13	chr13	+	5272	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	16	674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATACTTAAACCATATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	49806594	49833166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813497_49814442_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.131	chr13	+	4356	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	22	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	456.573942447384	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835627	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861885_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883496_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.134	chr13	+	5431	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	25	-12	intron_retention	FALSE	canonical	1	2	junction_11	380.51314037757	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835630	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858465_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.136	chr13	+	4355	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	28	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	574.252108337628	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835633	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856640_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863050_49863250_49865225_49865317_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876236_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.138	chr13	+	5145	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-29	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_34	526.598414485278	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835637	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49838353_49838444_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49886436
ES.9193.140	chr13	+	6450	10	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-27	-3665	intron_retention	FALSE	non_canonical	0	0	junction_9	532.508482515178	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGGCCAATAGTCTA	NA	False	NA	NA	False	NA	NA	NA	49835639	49861592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49861342_49861400
ES.9193.141	chr13	+	5975	32	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-26	-12	intron_retention	FALSE	canonical	1	598	junction_15	246.958644960041	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835640	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.145	chr13	+	4329	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-22	-22	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	374.982587903074	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACACTCTCTTAGATAC	NA	False	NA	8	True	ATTAAA	-9	NA	49835644	49887721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859364_49860162_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.147	chr13	+	4461	34	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	120	junction_1	357.515439185776	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835645	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.148	chr13	+	7898	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-20	-6	intron_retention	FALSE	canonical	0	0	junction_7	377.570750820293	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTGGAAGTAGTT	NA	False	NA	24	True	ATTAAA	-25	NA	49835646	49887737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49847273_49853672_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49885038_49885815_49885969_49887134
ES.9193.154	chr13	+	4377	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-19	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	375.290388943093	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835647	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863022_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.155	chr13	+	4097	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	72	257	-19	-257	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	1924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGGGAGTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	49835647	49887486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.156	chr13	+	4023	13	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-19	-3665	intron_retention	FALSE	non_canonical	0	0	junction_12	470.106430030005	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTGGCCAATAGTCTA	NA	False	NA	NA	False	NA	NA	NA	49835647	49861592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49859362_49860154_49861342_49861400
ES.9193.158	chr13	+	4266	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	72	88	-19	-88	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCTACCTGGATTTT	NA	False	NA	-58	True	AAGAAA	-15	NA	49835647	49887655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.159	chr13	+	4334	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-17	-12	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_29	370.212442423607	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835649	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882140_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.16	chr13	+	4415	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	22	94	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGACTATGCTAAATAT	NA	False	NA	25	True	AATAAA	-25	NA	49806600	49832308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.160	chr13	+	5203	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-16	-10	intron_retention	FALSE	canonical	1	598	junction_16	244.562921271679	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835650	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.161	chr13	+	4329	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	372.336180628419	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835657	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883608_49884890_49885038_49885815_49885969_49887134
ES.9193.162	chr13	+	4256	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	375.323627724138	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835657	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875670_49876152_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.163	chr13	+	4328	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_33	371.653526062035	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835657	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887143
ES.9193.164	chr13	+	4332	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	449.278795986899	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835657	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880769_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.165	chr13	+	4413	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	451.374676134229	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835661	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883594_49884893_49885038_49885815_49885969_49887134
ES.9193.166	chr13	+	4305	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	375.048722883137	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835661	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856743_49857775_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.167	chr13	+	4244	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	379.504235607127	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835661	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.168	chr13	+	4449	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	460.064901582179	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49835661	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49849054_49849166_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.169	chr13	+	4781	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	66	junction_1	364.511447064866	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835661	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49836121_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.170	chr13	+	4236	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	369.779748341816	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTTGGAAGTAGTTA	NA	False	NA	25	True	ATTAAA	-26	NA	49835661	49887738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869186_49869284_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.171	chr13	+	4947	29	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-6	intron_retention	FALSE	canonical	0	0	junction_19	401.59472127141	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTGGAAGTAGTT	NA	False	NA	24	True	ATTAAA	-25	NA	49835661	49887737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.172	chr13	+	4300	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-3	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	374.09042183652	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835663	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869190_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.176	chr13	+	3794	29	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	482.179120329399	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTGGAAGTAGTT	NA	False	NA	24	True	ATTAAA	-25	NA	49835669	49887737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49882126_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.179	chr13	+	5435	33	NIC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	13	0	intron_retention	FALSE	canonical	1	120	junction_1	362.663991731241	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835679	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.180	chr13	+	4382	35	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_32	447.863868806917	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49835679	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49884947_49884989_49885038_49885815_49885969_49887134
ES.9193.189	chr13	+	4532	35	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	518.649321326183	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTGGAAGTAGTT	NA	False	NA	24	True	ATTAAA	-25	NA	49835697	49887737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884660_49884790_49884893_49885038_49885815_49885969_49887134
ES.9193.19	chr13	+	4577	18	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	30	-4	intron_retention	FALSE	non_canonical	0	0	junction_6	61.8967216599485	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTTTATTCCTA	NA	False	NA	3	True	AATAAA	-9	NA	49806608	49832451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49825840_49825951_49826110_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.192	chr13	+	4389	34	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	38	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	373.195847372218	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835704	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840867_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.196	chr13	+	4359	34	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	74	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_33	497.110135367438	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTAGATACTGTGTTGG	NA	False	NA	16	True	ATTAAA	-17	NA	49835740	49887729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835785_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865317_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887131
ES.9193.198	chr13	+	4571	33	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	77	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	466.818419220405	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTTGGAAGTAGTTA	NA	False	NA	25	True	ATTAAA	-26	NA	49835743	49887738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49836121_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.20	chr13	+	4554	17	NNC	ENSMUSG00000021392.9	novel	4765	17	NA	NA	31	0	intron_retention	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTATTCCTAATTA	NA	False	NA	7	True	AATAAA	-13	NA	49806609	49832455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813497_49814434_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.200	chr13	+	4546	33	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	77	-9	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_31	457.725281794386	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835743	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49836121_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49885815_49885969_49887134
ES.9193.201	chr13	+	4982	34	Fusion	ENSMUSG00000037851.14_ENSMUSG00000087963.3	novel	3789	33	NA	NA	-2	-9	multi-exon	FALSE	canonical	1	31	junction_1	369.099069422653	1926	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49837774	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_49838444_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.202	chr13	+	4573	33	FSM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	-259	-525	-259	-1	multi-exon	FALSE	canonical	1	598	junction_16	240.046406646194	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGGAAGTAGTTATTCT	NA	False	NA	29	True	ATTAAA	-30	NA	49840609	49887742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.203	chr13	+	4313	33	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	-13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	638.677527689052	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49840855	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856743_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861885_49861956_49863054_49863250_49865225_49865312_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878803_49879641_49879731_49880600_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.207	chr13	+	4300	33	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	377.873479105027	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49840859	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856658_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.21	chr13	+	3662	13	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	-62	3183	intron_retention	FALSE	non_canonical	0	0	junction_6	41.0110926728638	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGAATCAGTGTGTCC	NA	False	NA	NA	False	AGTAAA	-26	NA	49806746	49826414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027
ES.9193.211	chr13	+	4432	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	463.442896850254	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACACTCTCTTAGATACT	NA	False	NA	9	True	ATTAAA	-10	NA	49840859	49887722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884660_49884790_49884893_49885038_49885815_49885969_49887134
ES.9193.212	chr13	+	5946	31	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	-9	-8	intron_retention	FALSE	canonical	2	43	junction_14	332.504504564307	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49840859	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865317_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.216	chr13	+	993	8	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	1190	-7966	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	594.470438323737	1708	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGGGGGCTTTTGGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	49842058	49857291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49856953
ES.9193.217	chr13	+	3831	29	ISM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	4100	-520	4100	-6	3prime_fragment	FALSE	canonical	1	598	junction_12	255.172258244408	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGTGTTGGAAGTAGTT	NA	False	NA	24	True	ATTAAA	-25	NA	49844968	49887737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.219	chr13	+	3570	27	ISM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	14449	-524	-3964	-2	3prime_fragment	FALSE	canonical	1	598	junction_10	264.588024077446	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49855317	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.221	chr13	+	4783	19	NIC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	113	-2	intron_retention	FALSE	canonical	1	598	junction_4	301.192839462046	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49860145	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885969_49887134
ES.9193.222	chr13	+	5584	19	NIC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	142	-12	intron_retention	FALSE	canonical	1	598	junction_4	289.563080826575	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49860174	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.223	chr13	+	3942	15	ISM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	28862	-518	-1601	-8	3prime_fragment	FALSE	canonical	3	1635	junction_1	129.874350580765	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49869730	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.224	chr13	+	4162	13	NIC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	148	-8	intron_retention	FALSE	canonical	3	1635	junction_1	138.015976329634	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49871479	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.225	chr13	+	2950	2	ISM	ENSMUSG00000037851.14	ENSMUST00000165656.2	356	3	-2303	-71	1960	-1	intron_retention	FALSE	canonical	3	1647	junction_1	0	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49873291	49876643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49875744_49876145
ES.9193.227	chr13	+	3820	13	NNC	ENSMUSG00000037851.14	novel	3789	33	NA	NA	2625	9922	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	887.356134661964	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCTGAGGTGCTATCA	NA	False	NA	NA	False	NA	NA	NA	49878219	49897665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134_49887238_49892582_49892628_49894803_49895703_49895759_49896923_49897019
ES.9193.24	chr13	+	4084	17	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	-22	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.2683940590654	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATATTTGTGTTTATT	NA	False	NA	-1	True	AATAAA	-5	NA	49806786	49832447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806874_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813496_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.25	chr13	+	7169	16	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	-16	-2	intron_retention	FALSE	non_canonical	0	0	junction_6	43.5658377885956	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTCTTTTATTTAA	NA	False	NA	20	True	ATTAAA	-13	NA	49806792	49832489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.26	chr13	+	4084	17	NNC	ENSMUSG00000021392.9	novel	4765	17	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.2683940590654	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTATTCCTAATTA	NA	False	NA	7	True	AATAAA	-13	NA	49806792	49832455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806874_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813490_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.28	chr13	+	6620	16	NNC	ENSMUSG00000021392.9	novel	4381	17	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_6	43.608663767141	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806797	49832492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.3	chr13	+	4095	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.5738819743474	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806553	49832492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806608_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.30	chr13	+	4941	18	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	1	682	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.0746735592032	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATATGTCATCATTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	49806809	49833174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806874_49807004_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.31	chr13	+	8289	14	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_6	41.8413458776372	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTGTTTATTCCTAA	NA	False	NA	4	True	AATAAA	-10	NA	49806809	49832452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49826300_49828861_49830311_49831861
ES.9193.34	chr13	+	4165	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	12	81	intron_retention	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTAAGTATTTCTGA	NA	False	NA	12	True	AATAAA	-12	NA	49806837	49832295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813498_49814436_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.35	chr13	+	5599	17	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	13	1238	intron_retention	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49806838	49833730	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.37	chr13	+	4228	6	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	181	1944	intron_retention	FALSE	canonical	0	0	junction_4	56.5345911809752	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49807006	49816567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810730_49812171_49812308_49813425
ES.9193.38	chr13	+	3424	4	ISM	ENSMUSG00000021392.9	ENSMUST00000221083.2	745	7	2091	-1946	1821	1946	intron_retention	FALSE	canonical	3	136	junction_3	7.25718035235908	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49808646	49816569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49808712_49810150_49810230_49812171_49812308_49813425
ES.9193.39	chr13	+	6620	42	Fusion	ENSMUSG00000021392.9_ENSMUSG00000037851.14	novel	4426	34	NA	NA	-2381	-2	intron_retention	FALSE	canonical	0	0	junction_9	670.996166045906	2183	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	2864	False	NA	28	True	ATTAAA	-29	NA	49817611	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49835552_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815
ES.9193.4	chr13	+	5324	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	5	685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATGTCATCATTTCTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	49806560	49833177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.40	chr13	+	2614	6	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	115	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	74.4295640186076	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTTTATTCCTA	4700	False	NA	3	True	AATAAA	-9	NA	49823292	49832451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49823967_49825224_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.41	chr13	+	5279	2	Genic_Genomic	ENSMUSG00000021392.9	novel	4368	17	NA	NA	4681	1237	multi-exon	FALSE	non_canonical	0	0	junction_1	0	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	9266	False	NA	NA	False	NA	NA	NA	49827858	49833729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_49827999_49828590
ES.9193.42	chr13	+	4687	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	-213	-48	-213	48	multi-exon	FALSE	canonical	1	598	junction_17	241.366305222171	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTTGAAAGACTAAATT	NA	False	NA	78	True	AATGAA	-14	NA	49835362	49887791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.43	chr13	+	4288	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	368.746439336623	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835596	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880769_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.44	chr13	+	1731	14	ISM	ENSMUSG00000037851.14	ENSMUST00000047363.14	4396	34	-8	27251	-8	-4765	5prime_fragment	FALSE	canonical	3	1400	junction_1	118.499045011507	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGCATATTAGATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	49835597	49860492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154
ES.9193.45	chr13	+	4369	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-7	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	465.841777842511	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835598	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841768_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861954_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.46	chr13	+	4392	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-6	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	374.161662246347	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835599	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856029_49856648_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.5	chr13	+	4241	18	NNC	ENSMUSG00000021392.9	novel	4381	17	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.660892037384	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806561	49832492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806608_49807004_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.52	chr13	+	5409	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	0	intron_retention	FALSE	canonical	1	598	junction_16	243.941941655053	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835600	49887743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.54	chr13	+	5626	31	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-5	-2	intron_retention	FALSE	canonical	0	0	junction_12	393.306271667937	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGAAGTAGTTATTC	NA	False	NA	28	True	ATTAAA	-29	NA	49835600	49887741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49859362_49860154_49860282_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.59	chr13	+	5173	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-3	-8	intron_retention	FALSE	canonical	2	43	junction_17	321.923995057451	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835602	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865317_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885969_49887134
ES.9193.6	chr13	+	4659	17	NNC	ENSMUSG00000021392.9	novel	4368	17	NA	NA	6	21	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	42.228359842646	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGATAAGTTACAACT	NA	False	NA	44	True	ATTAAA	-37	NA	49806561	49832513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.60	chr13	+	5391	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	-3	-10	intron_retention	FALSE	canonical	1	50	junction_1	371.919974958912	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835602	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840867_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.61	chr13	+	4396	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	375.268104955481	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835605	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858414_49859267_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.66	chr13	+	4374	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	375.243879068928	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835614	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842113_49843920_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.67	chr13	+	4337	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_29	369.779748341816	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTTGGAAGTAGT	NA	False	NA	23	True	ATTAAA	-24	NA	49835615	49887736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880640_49880681_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.7	chr13	+	7276	4	ISM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	8	15604	6	1987	intron_retention	FALSE	canonical	3	140	junction_1	3.77123616632825	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	49806561	49816610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150
ES.9193.72	chr13	+	4364	34	NNC	ENSMUSG00000037851.14	novel	4396	34	NA	NA	11	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	569.268054205597	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATACTGTGTTGGAAGTA	NA	False	NA	21	True	ATTAAA	-22	NA	49835616	49887734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865308_49868285_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876147_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879641_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885817_49885969_49887134
ES.9193.73	chr13	+	4301	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	379.700437022398	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835616	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856047_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.76	chr13	+	4330	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	459.842048254137	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835618	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880599_49880780_49882134_49882241_49883490_49883617_49884893_49884947_49884992_49885038_49885815_49885969_49887134
ES.9193.78	chr13	+	4336	34	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	374.870975048595	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835619	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878127_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.8	chr13	+	4764	17	NNC	ENSMUSG00000021392.9	novel	4765	17	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	54.420814032868	263	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTGTTTATTCCTA	NA	False	NA	3	True	AATAAA	-9	NA	49806573	49832451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49807340_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814435_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.81	chr13	+	5158	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-11	intron_retention	FALSE	canonical	1	598	junction_17	244.096732554432	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGATACTGTGTTGGAAG	NA	False	NA	19	True	ATTAAA	-20	NA	49835619	49887732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.83	chr13	+	5921	33	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-10	intron_retention	FALSE	non_canonical	0	0	junction_15	381.107010839393	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATACTGTGTTGGAAGT	NA	False	NA	20	True	ATTAAA	-21	NA	49835619	49887733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861954_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.84	chr13	+	4516	35	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-12	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_33	457.781623381588	1926	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGATACTGTGTTGGAA	NA	False	NA	18	True	ATTAAA	-19	NA	49835619	49887731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49886063_49886210_49887134
ES.9193.88	chr13	+	4229	36	NNC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	7379	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_34	453.882809652403	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAGACTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	49835619	49895122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134_49887227_49892582_49892628_49894803
ES.9193.89	chr13	+	4813	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	14	-8	intron_retention	FALSE	canonical	1	598	junction_16	245.099079136887	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	False	NA	22	True	ATTAAA	-23	NA	49835619	49887735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ES.9193.9	chr13	+	4482	18	NNC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	52.0746735592032	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806586	49832492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_49806874_49807004_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813491_49814429_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ES.9193.90	chr13	+	1161	10	ISM	ENSMUSG00000037851.14	ENSMUST00000047363.14	4396	34	14	30901	14	-8415	5prime_fragment	FALSE	canonical	3	1400	junction_1	130.116187395044	1706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCAATGGAATCTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	49835619	49856842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642
ES.9194.1	chr13	-	156	1	Antisense	novelGene_ENSMUSG00000021392.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	49820246	49820090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49820100_49820200
ES.9195.1	chr13	-	4182	1	Antisense	novelGene_ENSMUSG00000037851.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAACAAGACAGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	49842652	49838470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49838500_49842700
ES.9195.2	chr13	-	7155	30	Antisense	novelGene_ENSMUSG00000077360.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAACAAGACAGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	49884959	49838470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49840988_49841632_49841789_49841998_49842117_49843920_49844004_49844966_49845086_49846497_49846646_49855317_49855405_49855960_49856023_49856640_49856737_49857741_49857868_49858306_49858399_49859260_49859359_49860151_49860280_49861879_49861953_49863051_49863249_49865224_49865310_49868286_49868371_49869157_49869304_49871379_49871501_49873051_49873144_49874554_49874634_49875620_49875743_49876144_49876247_49876466_49876551_49878091_49878268_49878694_49878805_49879628_49879729_49880600_49880776_49882130_49882239_49883488
ES.9195.3	chr13	-	3972	2	Antisense	novelGene_ENSMUSG00000037851.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAACAAGACAGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	49842652	49838470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49841789_49841998
ES.9195.4	chr13	-	1809	1	Intergenic	novelGene_7496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49865162	49863353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_49863400_49865200
ES.9195.5	chr13	-	4083	1	Antisense	novelGene_ENSMUSG00000037851.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49884959	49880876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_49880900_49885000
ES.9196.1	chr13	+	176	1	Intergenic	novelGene_7497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCTTAGCTA	NA	False	NA	NA	False	NA	NA	NA	49925234	49925410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_49925200_49925400
ES.9197.1	chr13	-	6496	4	NNC	ENSMUSG00000113437.2	novel	309	4	NA	NA	-17210	6192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGCTTTGGAAAGTAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	50339095	50313416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_50319618_50319844_50319907_50338464_50338546_50338943
ES.9198.1	chr13	+	1898	9	NIC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	-30	0	intron_retention	FALSE	canonical	3	6	junction_7	6.38357266740185	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTGTAGAGACACATT	NA	False	NA	NA	False	ATTAAA	-15	NA	50571869	50587799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586211_50586592_50587333
ES.9198.2	chr13	+	1528	8	NIC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	-24	125	intron_retention	FALSE	canonical	1	3	junction_2	7.5213980463361	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTCAAGAGCTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	50571875	50586537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_50572024_50573875_50574065_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206
ES.9198.3	chr13	+	5200	8	NIC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	15	junction_5	3.81725406168211	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGCTGTAGAGACACAT	NA	False	NA	NA	False	ATTAAA	-14	NA	50571895	50587798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_50572024_50573875_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586592_50587333
ES.9198.4	chr13	+	2036	9	NIC	ENSMUSG00000037816.11	novel	2316	11	NA	NA	5	0	intron_retention	FALSE	canonical	1	3	junction_2	7.22733526273688	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCATGAACTTTGCT	NA	False	NA	NA	False	ATTAAA	-32	NA	50571904	50587816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_50572024_50573875_50574065_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586592_50587333
ES.9198.5	chr13	+	7807	6	ISM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	5	-12	5	1	intron_retention	FALSE	canonical	3	18	junction_2	2.96647939483827	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCATGAACTTTGCTG	NA	False	NA	NA	False	ATTAAA	-33	NA	50571904	50587817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657
ES.9198.6	chr13	+	1775	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	19	4	2	2	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGTAGAGACACATTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	50571918	50587801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
ES.9198.7	chr13	+	1754	10	NNC	ENSMUSG00000037816.11	novel	1798	10	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	8.70220633297834	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTGTAGAGACACATTC	NA	False	NA	NA	False	ATTAAA	-16	NA	50571926	50587800	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586211_50586376_50586463_50586592_50587333
ES.9198.8	chr13	+	2430	8	NIC	ENSMUSG00000037816.11	novel	2316	11	NA	NA	-4	0	intron_retention	FALSE	canonical	1	3	junction_2	7.69839633446142	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTCCTGCATGAACTT	NA	False	NA	NA	False	ATTAAA	-28	NA	50571926	50587812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_50572024_50573875_50574065_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50586592_50587333
ES.9198.9	chr13	+	3813	2	FSM	ENSMUSG00000037816.11	ENSMUST00000177541.2	1914	2	-1895	-4	-744	0	multi-exon	FALSE	canonical	3	24	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCATGAACTTTGCT	NA	False	NA	NA	False	ATTAAA	-32	NA	50583261	50587816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_50586592_50587333
ES.9199.1	chr13	+	514	2	Antisense	novelGene_ENSMUSG00000101136.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTCTTGGTTCCGTC	NA	False	NA	NA	False	NA	NA	NA	50605649	50606635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_50605939_50606410
ES.92.1	chr1	+	2560	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACCAAACAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	10947552	10950112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_10947600_10950100
ES.920.1	chr1	+	223	1	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1148	False	NA	NA	False	NA	NA	NA	86505766	86505989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86505800_86506000
ES.9200.1	chr13	-	664	2	Intergenic	novelGene_7498	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	50607687	50602838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_50603447_50607631
ES.9201.1	chr13	+	161	1	Intergenic	novelGene_7499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCTTTAAAC	4767	False	NA	NA	False	NA	NA	NA	51170780	51170941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51170800_51170900
ES.9202.1	chr13	-	222	1	Intergenic	novelGene_7500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCAAGGTTTGCCTGTAT	NA	False	NA	NA	False	NA	NA	NA	51174700	51174478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51174500_51174700
ES.9203.1	chr13	+	177	1	Intergenic	novelGene_7501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAAGGGGGGGGGCTCG	NA	False	NA	NA	False	NA	NA	NA	51219010	51219187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51219000_51219200
ES.9204.1	chr13	-	191	1	Intergenic	novelGene_7502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATCTATTGGCTC	NA	False	NA	NA	False	NA	NA	NA	51234346	51234155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51234200_51234300
ES.9205.1	chr13	-	168	1	Intergenic	novelGene_7503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	51245354	51245186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51245200_51245400
ES.9206.1	chr13	+	4757	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-569	16	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	310.71375894865	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCTGTGTTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	51254346	51306598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51254765_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.10	chr13	+	2992	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	288.947323150009	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGTGGCTGTGAACT	NA	False	NA	NA	False	AATAAA	-11	NA	51254876	51306580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997_51304316_51305794
ES.9206.11	chr13	+	4211	4	NIC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	338.940833905991	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254888	51306582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51255027_51293392_51293647_51298337_51298572_51302997
ES.9206.13	chr13	+	4494	5	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-20	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	344.019167343914	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGTGGCTGTGAACT	NA	False	NA	NA	False	AATAAA	-11	NA	51254895	51306580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51293376_51293647_51298337_51298572_51302997
ES.9206.14	chr13	+	4255	5	NIC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-20	2	combination_of_known_splicesites	FALSE	canonical	2	22	junction_1	311.259939600328	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254895	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51255027_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.17	chr13	+	4405	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.753151378596	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254912	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293613_51298337_51298572_51302997
ES.9206.19	chr13	+	1179	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	1	-3277	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGACTTGATTGCTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	51254916	51303253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.2	chr13	+	4575	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-125	-16	-125	16	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCTGTGTTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	51254790	51306598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.20	chr13	+	4701	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	1	193	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTGACATTAATAA	NA	False	NA	NA	False	NA	NA	NA	51254916	51306775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.23	chr13	+	4425	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	37	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	353.647973115765	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254952	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997_51306178_51306226
ES.9206.24	chr13	+	4464	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	368.305919040137	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254956	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51262288_51262358_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.25	chr13	+	4279	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	314.644942752939	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254956	51306582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51277237_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.26	chr13	+	1993	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	45	-2419	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGTCCATTTGTACAC	NA	False	NA	19	True	AATAAA	-19	NA	51254960	51304111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.27	chr13	+	4263	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	313.753151378596	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGTGGCTGTGAACT	NA	False	NA	NA	False	AATAAA	-11	NA	51254966	51306580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293529_51298337_51298572_51302997
ES.9206.28	chr13	+	4697	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	264	6	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGAACTTTGTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	51255179	51306588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.29	chr13	+	1287	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	340	-3276	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGACTTGATTGCTTTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	51255255	51303254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.3	chr13	+	1220	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-89	3303	-89	-3251	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCTTAGATGTCCC	NA	False	NA	NA	False	ATTAAA	-43	NA	51254826	51303279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.30	chr13	+	2042	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	442	-2419	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGTCCATTTGTACAC	NA	False	NA	19	True	AATAAA	-19	NA	51255357	51304111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.31	chr13	+	4182	5	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	571	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	320.758476115597	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTGGCTGTGAACTT	NA	False	NA	NA	False	AATAAA	-12	NA	51255486	51306581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255548_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.32	chr13	+	4610	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	645	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	367.839827763238	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51255560	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255634_51275494_51275707_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.33	chr13	+	4378	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	663	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	314.644942752939	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51255578	51306582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255634_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.34	chr13	+	4719	8	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	674	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	385.759521156984	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51255589	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255634_51275494_51275707_51276523_51276662_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.35	chr13	+	4648	8	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	3894	-3275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	385.759521156984	730	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTGATTGCTTTCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	51258809	51303255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51261173_51261215_51262358_51276523_51276671_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.36	chr13	+	5648	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	20885	-2	-12554	2	3prime_fragment	FALSE	canonical	3	718	junction_3	64.5653738469778	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51275800	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.4	chr13	+	4735	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	367.60622047693	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254829	51306582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51275491_51275707_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.5	chr13	+	4594	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-73	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	360.37202999123	805	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254842	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51277123_51277325_51281960_51282010_51290984_51291070_51293392_51293647_51298337_51298572_51302997
ES.9206.6	chr13	+	2244	7	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-67	-2420	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	367.60622047693	763	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGGTCCATTTGTACA	NA	False	NA	18	True	AATAAA	-18	NA	51254848	51304110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255027_51275491_51275707_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.7	chr13	+	2029	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	-66	2471	-66	-2419	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGGTCCATTTGTACAC	NA	False	NA	19	True	AATAAA	-19	NA	51254849	51304111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.8	chr13	+	4356	5	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-46	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	320.758476115597	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	51254869	51306584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9206.9	chr13	+	4554	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTGTGAACTTTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	51254873	51306585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ES.9207.1	chr13	-	3450	2	Intergenic	novelGene_7504	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCTTGTTATTGTATAA	NA	False	NA	NA	False	AATACA	-18	NA	51254751	51250961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51251111_51251450
ES.9207.2	chr13	-	3078	1	Intergenic	novelGene_7505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAAAGCAGGTTGA	NA	False	NA	NA	False	NA	NA	NA	51254817	51251739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51251700_51254800
ES.9207.3	chr13	-	1623	1	Intergenic	novelGene_7506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCCATATCAAATGGT	NA	False	NA	NA	False	NA	NA	NA	51254786	51253163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51253200_51254800
ES.9208.1	chr13	-	3927	1	Antisense	novelGene_ENSMUSG00000021395.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	51290244	51286317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_51286300_51290200
ES.9209.1	chr13	-	4001	1	Antisense	novelGene_ENSMUSG00000021395.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGTCAATATTTAGATA	NA	False	NA	NA	False	NA	NA	NA	51306962	51302961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_51303000_51307000
ES.9209.2	chr13	-	1027	1	Antisense	novelGene_ENSMUSG00000021395.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATTAAAAGACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	51306464	51305437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_51305400_51306500
ES.921.1	chr1	+	2132	7	Fusion	ENSMUSG00000026240.13_ENSMUSG00000102927.2	novel	286	3	NA	NA	1127	25	multi-exon	FALSE	non_canonical	0	0	junction_1	137.621461504617	233	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGATTTGACATATGCG	4288	False	NA	NA	False	AAAAAG	-37	NA	86508906	86534247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr1_+_86508932_86516898_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.10	chr1	+	3881	6	NNC	ENSMUSG00000026240.13	novel	2231	7	NA	NA	-18	-64	intron_retention	FALSE	canonical	1	1	junction_2	147.012108344857	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAATATTTG	NA	False	NA	29	True	AATACA	-19	NA	86514803	86533984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86514958_86516885_86517064_86520019_86520089_86524472_86524562_86526724_86528911_86532779
ES.921.11	chr1	+	2234	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	22	-25	-9	25	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGATTTGACATATGCG	NA	False	NA	NA	False	AAAAAG	-37	NA	86514843	86534247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.12	chr1	+	3866	6	NNC	ENSMUSG00000026240.13	novel	2231	7	NA	NA	-8	-65	intron_retention	FALSE	non_canonical	0	0	junction_3	152.112589879996	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	NA	False	NA	28	True	AATACA	-18	NA	86514844	86533983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86514958_86516885_86517064_86520012_86520089_86524452_86524562_86526724_86528911_86532779
ES.921.13	chr1	+	1873	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	-8	713	3	-61	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	NA	False	NA	32	True	AATACA	-22	NA	86514855	86533987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
ES.921.14	chr1	+	1418	7	NNC	ENSMUSG00000026240.13	novel	2231	7	NA	NA	-2	-65	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	163.276520731617	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	NA	False	NA	28	True	AATACA	-18	NA	86514861	86533983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779_86533398_86533842
ES.921.15	chr1	+	5943	6	NNC	ENSMUSG00000026240.13	novel	2578	6	NA	NA	0	-64	intron_retention	TRUE	non_canonical	0	0	junction_4	144.870424863048	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAATATTTG	NA	False	NA	29	True	AATACA	-19	NA	86514863	86533984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86525060_86525107_86528911_86532779
ES.921.16	chr1	+	1968	7	NNC	ENSMUSG00000026240.13	novel	2231	7	NA	NA	0	-64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	139.641206907799	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAATATTTG	NA	False	NA	29	True	AATACA	-19	NA	86514863	86533984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86514958_86516885_86517064_86520012_86520089_86524455_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.17	chr1	+	2511	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	43	-323	1	-155	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATATCCTCACTGAAG	NA	False	NA	15	True	NA	NA	NA	86514864	86534545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.19	chr1	+	1862	6	ISM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	2058	239	2016	-65	3prime_fragment	FALSE	canonical	3	303	junction_2	33.5797558061401	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	NA	False	NA	28	True	AATACA	-18	NA	86516879	86533983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.2	chr1	+	4549	6	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	-623	-65	intron_retention	FALSE	canonical	2	14	junction_1	143.817106075738	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTGTGTCAATATTT	5384	False	NA	28	True	AATACA	-18	NA	86510002	86533983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86528911_86532779
ES.921.20	chr1	+	2125	6	ISM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	2059	-25	2017	25	3prime_fragment	FALSE	canonical	3	303	junction_2	33.5797558061401	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGATTTGACATATGCG	NA	False	NA	NA	False	AAAAAG	-37	NA	86516880	86534247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.21	chr1	+	3101	4	ISM	ENSMUSG00000026240.13	ENSMUST00000138280.8	1950	6	8124	62	-1485	-62	3prime_fragment	FALSE	canonical	3	343	junction_2	22.6028513442196	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCAATATTTGTT	258	False	NA	31	True	AATACA	-21	NA	86522976	86533986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.3	chr1	+	2332	9	NNC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	-609	-52	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	156.638866106085	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGTTATAGTCCAAT	5398	False	NA	41	True	AATACA	-31	NA	86510016	86533996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86510175_86510733_86510819_86514737_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.4	chr1	+	2637	9	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	17	25	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	172.958764955697	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGATTTGACATATGCG	6024	False	NA	NA	False	AAAAAG	-37	NA	86510642	86534247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86514737_86514958_86515068_86515190_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.5	chr1	+	2369	9	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	-12	-64	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	172.958764955697	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTGTGTCAATATTTG	6029	False	NA	29	True	AATACA	-19	NA	86510647	86533984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86514737_86514958_86515068_86515190_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.6	chr1	+	2255	8	FSM	ENSMUSG00000026240.13	ENSMUST00000121534.8	5383	8	22	3106	-12	-57	multi-exon	FALSE	canonical	3	5	junction_1	127.599500990643	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAATATTTGTTATAGT	6029	False	NA	36	True	AATACA	-26	NA	86510647	86533991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86510819_86514737_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.7	chr1	+	2034	7	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	-9	-55	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	132.540140670247	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATATTTGTTATAGTCC	6032	False	NA	38	True	AATACA	-28	NA	86510650	86533993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.921.8	chr1	+	10482	6	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	10	-61	intron_retention	FALSE	canonical	3	5	junction_1	147.52816680214	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	6051	False	NA	32	True	AATACA	-22	NA	86510669	86533987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86514737_86514958_86516885_86517064_86520012_86524562_86526724_86526928_86528804
ES.921.9	chr1	+	2227	6	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	13	164	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	145.183194619763	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGTGTTCCTTATTT	6054	False	NA	NA	False	AAAAAG	-22	NA	86510672	86534386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86510819_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ES.9210.1	chr13	+	959	2	FSM	ENSMUSG00000021396.6	ENSMUST00000021828.6	1167	2	205	3	168	-3	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCTCTGATGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	51325262	51329221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51325661_51328660
ES.9211.1	chr13	-	182	1	Intergenic	novelGene_7507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTGACCATCTC	NA	False	NA	NA	False	NA	NA	NA	51341273	51341091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51341100_51341300
ES.9212.1	chr13	+	4726	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	-930	667	-930	-667	multi-exon	FALSE	canonical	3	36	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGAGGCCTGTGTGGTA	NA	False	NA	11	True	AATAAA	-29	NA	51561744	51576166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51562982_51572677
ES.9213.1	chr13	+	186	1	Intergenic	novelGene_7508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	51606854	51607040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51606900_51607000
ES.9214.1	chr13	-	1362	6	NNC	ENSMUSG00000021448.9	novel	1537	12	NA	NA	106660	354	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCCCTGCTGATACAG	NA	False	NA	NA	False	AATACA	-19	NA	51614460	51584722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51585318_51596725_51597022_51601925_51602085_51603262_51603351_51605525_51605677_51614387
ES.9214.2	chr13	-	1696	5	NNC	ENSMUSG00000021448.9	novel	1537	12	NA	NA	116308	24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.22474487139159	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTCAAATTTCATAAATA	NA	False	NA	NA	False	ATTAAA	-25	NA	51604812	51585052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51585318_51596725_51597022_51601925_51602085_51603262_51603351_51603924
ES.9215.1	chr13	+	181	1	Intergenic	novelGene_7509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTGGGGTAGAG	NA	False	NA	NA	False	NA	NA	NA	51672605	51672786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51672600_51672800
ES.9216.1	chr13	+	174	1	Intergenic	novelGene_7510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	51740584	51740758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51740600_51740800
ES.9217.1	chr13	+	155	1	Intergenic	novelGene_7511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTTTCTATTTC	NA	False	NA	NA	False	NA	NA	NA	51742518	51742673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51742500_51742700
ES.9218.1	chr13	-	175	1	Intergenic	novelGene_7512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAAAC	6305	False	NA	NA	False	NA	NA	NA	51761260	51761085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51761100_51761300
ES.9219.1	chr13	+	379	1	Intergenic	novelGene_7513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAATCAAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	51784043	51784422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51784000_51784400
ES.9219.2	chr13	+	200	1	Intergenic	novelGene_7514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGGCTTAG	NA	False	NA	NA	False	NA	NA	NA	51784046	51784246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51784000_51784200
ES.922.1	chr1	-	1413	6	NNC	ENSMUSG00000026239.15	novel	1159	5	NA	NA	-175	4619	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	134.947397159041	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATTTGTATTGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	86510526	86466096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_86466124_86470745_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
ES.922.2	chr1	-	422	1	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAATAAACAAA	438	False	NA	NA	False	GATAAA	-29	NA	86467041	86466619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86466600_86467000
ES.922.3	chr1	-	1229	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	9	-79	9	79	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACTAGACTGATAGTTT	NA	False	NA	96	True	NA	NA	NA	86510260	86470636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
ES.922.4	chr1	-	1128	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	9	22	9	6	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGATGCTTCCATCTCC	NA	False	NA	-5	True	ATTAAA	-21	NA	86510260	86470737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
ES.922.5	chr1	-	5968	4	ISM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	29847	26	29817	2	3prime_fragment	FALSE	canonical	3	312	junction_1	5.35412613473634	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCCGATGCTTCCAT	8431	False	NA	-9	True	ATTAAA	-17	NA	86480422	86470741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250
ES.922.6	chr1	-	1207	5	FSM	ENSMUSG00000026239.15	ENSMUST00000143674.8	1306	5	99	0	-13	0	multi-exon	FALSE	canonical	2	7	junction_3	145.167145043222	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCATGCCGATGCTTCC	NA	False	NA	-11	True	ATTAAA	-15	NA	86510252	86470743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475157_86475340_86510021
ES.922.7	chr1	-	988	4	NIC	ENSMUSG00000026239.15	novel	1159	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	164.641698511917	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCATGCCGATGCTTCC	NA	False	NA	-11	True	ATTAAA	-15	NA	86510232	86470743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_86471306_86474378_86474505_86475250_86475340_86510021
ES.9220.1	chr13	+	759	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	24	-91	24	91	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAATATTAAGCTCC	NA	False	NA	NA	False	AATAAA	-40	NA	51799291	51804787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51799508_51803620_51803749_51804372
ES.9220.10	chr13	+	3341	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	-12	-1	-12	1	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGCTATTGTGATCTTA	5482	False	NA	9	True	AATAAA	-21	NA	51805720	51838081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.11	chr13	+	3172	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	-10	166	-10	-166	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGTATATATCAAATT	5484	False	NA	NA	False	CATAAA	-29	NA	51805722	51837914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.12	chr13	+	6455	15	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-10	-197	intron_retention	FALSE	canonical	3	121	junction_2	18.5081338985907	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATGCTTTTAGTTTT	5484	False	NA	NA	False	AAGAAA	-29	NA	51805722	51837883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.13	chr13	+	6700	15	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	56.6062302765557	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5494	False	NA	7	True	AATAAA	-19	NA	51805732	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51807728_51810252_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51830231_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.14	chr13	+	5783	16	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	4	-3	intron_retention	FALSE	canonical	3	17	junction_2	38.2180876316728	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGGCTATTGTGAT	5498	False	NA	5	True	AATAAA	-17	NA	51805736	51838077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.15	chr13	+	3099	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	48.5109121100604	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5503	False	NA	7	True	AATAAA	-19	NA	51805741	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.16	chr13	+	4701	16	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	12	-169	intron_retention	FALSE	canonical	3	118	junction_12	19.7094450003602	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGCAGTATATATCAA	5506	False	NA	NA	False	CATAAA	-26	NA	51805744	51837911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.17	chr13	+	4408	18	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	14	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.2225974670201	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGGCTATTGTGAT	5508	False	NA	5	True	AATAAA	-17	NA	51805746	51838077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51810327_51810916_51811147_51816656_51816736_51817348_51817396_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.18	chr13	+	3206	17	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	16	4	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	37.006703362364	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATTGTGATCTTAGGT	5510	False	NA	12	True	AATAAA	-24	NA	51805748	51838084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.19	chr13	+	3301	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	40.6384593088862	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGGCTATTGTGAT	5512	False	NA	5	True	AATAAA	-17	NA	51805750	51838077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836485_51836670_51837313
ES.9220.2	chr13	+	4748	2	NIC	ENSMUSG00000062248.6	novel	692	3	NA	NA	54	-3	intron_retention	FALSE	canonical	3	3514	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCATTGTTGAAATTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	51799321	51804693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51803749_51804372
ES.9220.20	chr13	+	3113	16	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	53.874999355504	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5513	False	NA	7	True	AATAAA	-19	NA	51805751	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819345_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.21	chr13	+	3269	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	40.3220918821184	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTATTGTGATCTTAG	5513	False	NA	10	True	AATAAA	-22	NA	51805751	51838082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819349_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.22	chr13	+	4855	16	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	19	-8	intron_retention	FALSE	canonical	3	118	junction_12	19.7094450003602	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCATCTCAGGCTATT	5513	False	NA	0	True	AATAAA	-12	NA	51805751	51838072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.23	chr13	+	3255	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	21	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	40.2895768158466	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGGCTATTGTGAT	5515	False	NA	5	True	AATAAA	-17	NA	51805753	51838077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833946_51836040_51836191_51836479_51836670_51837313
ES.9220.24	chr13	+	3326	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	38.735430728856	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5515	False	NA	8	True	AATAAA	-20	NA	51805753	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837294
ES.9220.25	chr13	+	3416	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6601770778239	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5516	False	NA	8	True	AATAAA	-20	NA	51805754	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806902_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.26	chr13	+	3451	18	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	22	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	63.7071044367058	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5516	False	NA	7	True	AATAAA	-19	NA	51805754	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51834343_51834606_51836035_51836191_51836485_51836670_51837313
ES.9220.28	chr13	+	4245	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.6408925671734	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5517	False	NA	8	True	AATAAA	-20	NA	51805755	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51810327_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.29	chr13	+	2888	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-20	-197	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	48.5109121100604	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAATGCTTTTAGTTTT	5518	False	NA	NA	False	AAGAAA	-29	NA	51805756	51837883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.3	chr13	+	5337	1	FSM	ENSMUSG00000064672.3	ENSMUST00000082738.3	136	1	-2879	-2322	-2879	2322	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACCATTGTTGAAATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	51799355	51804692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51799400_51804700
ES.9220.30	chr13	+	3269	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_12	50.5030552912396	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5518	False	NA	7	True	AATAAA	-19	NA	51805756	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832794_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.31	chr13	+	4333	18	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-19	-138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.6508874510885	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGGTGTCTACAAAT	5519	False	NA	NA	False	NA	NA	NA	51805757	51837942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51810327_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832078_51832197_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.32	chr13	+	3158	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-19	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	50.8087329476932	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTATTGTGATCTTAG	5519	False	NA	10	True	AATAAA	-22	NA	51805757	51838082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819345_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.35	chr13	+	2630	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	33	665	-11	-110	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTTCTTGCCTGTG	5527	False	NA	NA	False	NA	NA	NA	51805765	51837415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.36	chr13	+	2826	8	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-11	1487	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.3244978702437	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	5527	False	NA	NA	False	NA	NA	NA	51805765	51821779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51820097
ES.9220.37	chr13	+	5266	14	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-11	0	intron_retention	FALSE	non_canonical	0	0	junction_12	57.1052179503744	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5527	False	NA	8	True	AATAAA	-20	NA	51805765	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819345_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51833982_51836603_51836670_51837313
ES.9220.38	chr13	+	5435	16	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-4	0	intron_retention	FALSE	canonical	3	17	junction_2	38.1540736138795	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5534	False	NA	8	True	AATAAA	-20	NA	51805772	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.39	chr13	+	3173	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	37.9588078546995	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5540	False	NA	8	True	AATAAA	-20	NA	51805778	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.4	chr13	+	593	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	89	10	89	-10	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATATCACCATTGTTGA	NA	False	NA	NA	False	AATAAA	-14	NA	51799356	51804686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_51799508_51803620_51803749_51804372
ES.9220.41	chr13	+	3998	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	25	-201	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	50.6408925671734	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATTAATGCTTTTAG	5563	False	NA	NA	False	AAGAAA	-25	NA	51805801	51837879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51810327_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.44	chr13	+	2944	17	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-20	-194	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	37.006703362364	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGCTTTTAGTTTTTAT	5574	False	NA	NA	False	CATAAA	-1	NA	51805812	51837886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.45	chr13	+	3972	16	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	-2	0	intron_retention	FALSE	canonical	3	121	junction_2	18.0844930503702	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5592	False	NA	8	True	AATAAA	-20	NA	51805830	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.46	chr13	+	4763	13	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	5239	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	60.0853559530107	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	NA	False	NA	8	True	AATAAA	-20	NA	51811071	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51811780_51815038_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833031_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.47	chr13	+	3136	11	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	10824	-1	intron_retention	FALSE	canonical	1	3	junction_1	48.8831259229604	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	NA	False	NA	7	True	AATAAA	-19	NA	51816656	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51816736_51819345_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.48	chr13	+	3706	11	NNC	ENSMUSG00000035139.15	novel	784	3	NA	NA	-11261	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	60.4206090667746	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	4841	False	NA	8	True	AATAAA	-20	NA	51822507	51838080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51834978_51836035_51836191_51836479_51836670_51837313
ES.9220.49	chr13	+	4459	10	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	16801	1	-11235	-1	3prime_fragment	FALSE	canonical	3	118	junction_6	19.484720192696	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	4867	False	NA	7	True	AATAAA	-19	NA	51822533	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.5	chr13	+	1217	2	ISM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	92	7	92	-7	intron_retention	FALSE	canonical	3	3529	junction_1	0	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCACCATTGTTGAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	51799359	51804689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_51799508_51803620
ES.9220.50	chr13	+	3486	11	NNC	ENSMUSG00000035139.15	novel	784	3	NA	NA	-11218	63085	intron_retention	FALSE	non_canonical	0	0	junction_10	61.7109390626978	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAACTCATTAAAAAG	4884	False	NA	NA	False	NA	NA	NA	51822550	51901165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833990_51836035_51836191_51836479_51836670_51837313_51838081_51901096
ES.9220.51	chr13	+	3311	10	NNC	ENSMUSG00000035139.15	novel	751	2	NA	NA	-11217	-1	intron_retention	FALSE	canonical	1	1	junction_9	60.3350726166325	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	4885	False	NA	7	True	AATAAA	-19	NA	51822551	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836485
ES.9220.52	chr13	+	3748	10	NNC	ENSMUSG00000035139.15	novel	784	3	NA	NA	-10847	-1	intron_retention	FALSE	canonical	3	12	junction_6	62.3787713177417	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGCTATTGTGATCT	5255	False	NA	7	True	AATAAA	-19	NA	51822921	51838079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ES.9220.53	chr13	+	2812	3	Antisense	novelGene_ENSMUSG00000021451.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAACAATAATAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-42	NA	51879858	51883120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_51880612_51880871_51881692_51881881
ES.9220.54	chr13	+	168	1	Intergenic	novelGene_7517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	51881687	51881855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51881700_51881900
ES.9220.6	chr13	+	631	3	NNC	ENSMUSG00000062248.6	novel	692	3	NA	NA	93	-4	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_1	1735	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACCATTGTTGAAATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	51799360	51804692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51799544_51803620_51803749_51804372
ES.9220.7	chr13	+	573	3	NNC	ENSMUSG00000062248.6	novel	692	3	NA	NA	97	-4	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	1740	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACCATTGTTGAAATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	51799364	51804692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51799508_51803638_51803749_51804372
ES.9220.8	chr13	+	829	3	NNC	ENSMUSG00000062248.6	novel	692	3	NA	NA	480	-6	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	1730.5	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCACCATTGTTGAAATT	NA	False	NA	NA	False	AATAAA	-18	NA	51799747	51804690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_51800131_51803620_51803749_51804372
ES.9220.9	chr13	+	3439	8	Fusion	ENSMUSG00000035139.15_ENSMUSG00000062248.6	novel	3328	17	NA	NA	-1295	1486	multi-exon	FALSE	canonical	0	0	junction_7	69.762278562301	439	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTTCTTGGTCATG	4199	False	NA	NA	False	NA	NA	NA	51804437	51821778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819345_51819511_51820663
ES.9221.1	chr13	+	183	1	Intergenic	novelGene_7518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGAGCTCATTAT	NA	False	NA	NA	False	NA	NA	NA	51939755	51939938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51939800_51939900
ES.9222.1	chr13	-	1977	1	Antisense	novelGene_ENSMUSG00000035139.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51825359	51823382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_51823400_51825400
ES.9223.1	chr13	-	3126	17	NIC	ENSMUSG00000021451.17	novel	1249	5	NA	NA	-57	-3	combination_of_known_splicesites	TRUE	canonical	1	2	junction_2	76.5530606426027	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATGTCTCTAGGTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	51908858	51839567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51908631
ES.9223.11	chr13	-	4625	17	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	72.2103859825579	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	51947754	51855282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877727_51879259_51879579_51917287_51917357_51929734_51929906_51947532
ES.9223.12	chr13	-	748	3	NNC	ENSMUSG00000021451.17	novel	405	3	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	4.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	51910707	51855282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51855747_51879409_51879579_51910592
ES.9223.13	chr13	-	4524	17	FSM	ENSMUSG00000021451.17	ENSMUST00000110040.9	4472	17	-53	1	21	-1	multi-exon	FALSE	canonical	3	16	junction_15	57.0268234583516	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	51947762	51855282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51917287_51917357_51947532
ES.9223.15	chr13	-	4214	15	NNC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	5939	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.7905909033914	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCAGCCTTTGCCTT	NA	False	NA	-5	True	AATAAA	-19	NA	51882860	51855282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51882807
ES.9223.18	chr13	-	4347	15	NNC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	51.7905909033914	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	51908779	51855283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51908592
ES.9223.2	chr13	-	3167	18	NIC	ENSMUSG00000021451.17	novel	1249	5	NA	NA	-23	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	67.7604165309136	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATGTCTCTAGGTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	51947732	51839568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.20	chr13	-	4391	17	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	29	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	48.4547146828872	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	51947754	51855283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51856103_51856162_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.21	chr13	-	4283	16	NNC	ENSMUSG00000021451.17	novel	4472	17	NA	NA	-4664	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_15	61.097590423482	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCCAGCCTTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	51893463	51855283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51893404
ES.9223.22	chr13	-	4169	17	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.4547146828872	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCCAGCCTTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	51947748	51855284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51856963_51857237_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.23	chr13	-	4350	16	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	49.3394590791409	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCCAGCCTTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	51947699	51855284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863043_51864008_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.24	chr13	-	4409	16	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.3394590791409	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCCAGCCTTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	51947701	51855284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863935_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.25	chr13	-	3749	15	NNC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	9346	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	75.1310419825771	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCCAGCCTTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	51879453	51855284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51856287_51856478_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865630_51866743_51866867_51867727_51867842_51868829_51868924_51874541_51874624_51876369_51876417_51877578_51877725_51879259
ES.9223.27	chr13	-	4223	16	NNC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	62.906986010211	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCCAGCCTTTGCC	NA	False	NA	-7	True	AATAAA	-17	NA	51910708	51855284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879343_51879394_51879579_51910592
ES.9223.3	chr13	-	5873	19	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	-35	-5	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	67.2708042995705	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAGCATGTCTCTAGGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	51947744	51839569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51854872_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.30	chr13	-	4063	15	NNC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	9389	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	66.0616595094527	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGGGCCAGCCTTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	51879410	51855285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51870599_51870673_51874541_51874641_51876353_51876417_51877578_51877725_51879259
ES.9223.31	chr13	-	4526	15	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	28	0	intron_retention	FALSE	canonical	3	95	junction_8	24.8304454331404	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGGGCCAGCCTTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	51947755	51855285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51857568_51858988_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.33	chr13	-	4505	17	NNC	ENSMUSG00000021451.17	novel	4472	17	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	62.2735899077611	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGTTGACTGGGCCAGCC	NA	False	NA	-13	True	AATAAA	-11	NA	51947697	51855290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51931516_51931635_51947532
ES.9223.34	chr13	-	2285	13	NNC	ENSMUSG00000021451.17	novel	4472	17	NA	NA	-4652	3140	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	63.6821534393009	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGAACT	NA	False	NA	NA	False	NA	NA	NA	51893451	51862395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51893404
ES.9223.35	chr13	-	224	1	Intergenic	novelGene_7516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATTTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-20	NA	51880867	51880643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51880600_51880900
ES.9223.4	chr13	-	2797	1	Intergenic	novelGene_7515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	51848801	51846004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_51846000_51848800
ES.9223.5	chr13	-	4278	15	NIC	ENSMUSG00000021451.17	novel	4415	15	NA	NA	2	6	combination_of_known_junctions	FALSE	canonical	2	9	junction_14	49.7949366330123	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTTTGCCTTAGTGTGG	NA	False	NA	2	True	AATAAA	-26	NA	51910702	51855275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51910592
ES.9223.6	chr13	-	4505	16	FSM	ENSMUSG00000021451.17	ENSMUST00000021900.14	4482	16	-19	-4	-19	4	multi-exon	FALSE	canonical	3	95	junction_9	25.4317387005555	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTTTGCCTTAGTGT	NA	False	NA	0	True	AATAAA	-24	NA	51947802	51855277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ES.9223.7	chr13	-	4595	16	NIC	ENSMUSG00000021451.17	novel	4472	17	NA	NA	28	1	intron_retention	FALSE	canonical	3	16	junction_14	57.3641002718599	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGCCTTTGCCTTAG	NA	False	NA	-3	True	AATAAA	-21	NA	51947755	51855280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51857568_51858988_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51917287_51917357_51947532
ES.9223.8	chr13	-	4425	15	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	50.6785085069578	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51947795	51855281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51947532
ES.9223.9	chr13	-	4606	15	NIC	ENSMUSG00000021451.17	novel	4482	16	NA	NA	-274	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_14	50.4570943212839	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51909075	51855281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51908631
ES.9224.1	chr13	+	158	1	Intergenic	novelGene_7519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	51990320	51990478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_51990300_51990500
ES.9225.1	chr13	+	1071	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTAATGCCTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	52000713	52002504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
ES.9225.2	chr13	+	1439	3	NIC	ENSMUSG00000021453.3	novel	1071	4	NA	NA	85	0	intron_retention	FALSE	canonical	3	52	junction_2	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTAATGCCTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	52000864	52002504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52001490_52001591_52001806_52001904
ES.9226.1	chr13	-	1971	1	Intergenic	novelGene_7520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGGGCTGGAAAGATG	NA	False	NA	NA	False	NA	NA	NA	52122907	52120936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52120900_52122900
ES.9227.1	chr13	+	3537	1	Intergenic	novelGene_7521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	52141189	52144726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_52141200_52144700
ES.9228.1	chr13	+	3628	7	ISM	ENSMUSG00000113211.2	ENSMUST00000220691.2	3270	8	-44	-8	-44	8	intron_retention	FALSE	canonical	2	4	junction_2	2.74873708374511	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATAATCATGTATT	NA	False	NA	NA	False	NA	NA	NA	52250732	52278202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192
ES.9228.2	chr13	+	3506	9	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	4.38035386698381	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATGTGTGTATAAT	NA	False	NA	NA	False	NA	NA	NA	52250774	52278194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52274502_52274581_52276192_52276931_52277080
ES.9228.3	chr13	+	3278	8	FSM	ENSMUSG00000113211.2	ENSMUST00000220691.2	3270	8	0	-8	0	8	multi-exon	FALSE	canonical	1	1	junction_7	3.45229884959845	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATAATCATGTATT	NA	False	NA	NA	False	NA	NA	NA	52250776	52278202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276778_52277083
ES.9228.4	chr13	+	3421	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.30945803685667	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATAATCATGTATT	NA	False	NA	NA	False	NA	NA	NA	52250778	52278202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52250877_52252577_52252882_52253337_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277083
ES.9228.5	chr13	+	3429	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	2	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.69776545872708	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATAATCATGTATT	NA	False	NA	NA	False	NA	NA	NA	52250778	52278202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52250877_52252577_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277083
ES.9228.6	chr13	+	3330	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	5	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.30945803685667	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTATAATCATGTATT	NA	False	NA	NA	False	NA	NA	NA	52250781	52278202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52250877_52252577_52252783_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276931_52277080
ES.9228.7	chr13	+	3464	8	NNC	ENSMUSG00000113211.2	novel	3270	8	NA	NA	19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.04389653609465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAAAATGTGTGTATAA	NA	False	NA	NA	False	NA	NA	NA	52250795	52278193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52250877_52252363_52252882_52253329_52253416_52272202_52272728_52273173_52273596_52274101_52274239_52276192_52276778_52277083
ES.9228.8	chr13	+	1935	1	Intergenic	novelGene_7522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCTCTCCTCGTGGCC	NA	False	NA	NA	False	AATAAA	-14	NA	52262427	52264362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_52262400_52264400
ES.9229.1	chr13	+	154	1	Intergenic	novelGene_7523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	52406745	52406899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_52406700_52406900
ES.923.1	chr1	-	295	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	86513474	86513179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86513200_86513500
ES.923.2	chr1	-	181	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATTACAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	86513480	86513299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86513300_86513500
ES.9230.1	chr13	-	4687	1	Intergenic	novelGene_7524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	1231	False	NA	NA	False	NA	NA	NA	52586661	52581974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52582000_52586700
ES.9231.1	chr13	-	1563	3	Intergenic	novelGene_7525	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTACTTAGTGATTAA	1698	False	NA	NA	False	ATTAAA	-15	NA	52598537	52595695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52597007_52597120_52597238_52598402
ES.9232.1	chr13	-	4260	2	FSM	ENSMUSG00000047842.8	ENSMUST00000057442.8	4786	2	531	-5	531	5	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGAGTTTGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52684784	52658410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_52662342_52684455
ES.9232.2	chr13	-	4209	3	NNC	ENSMUSG00000047842.8	novel	4786	2	NA	NA	-6831	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGAGTTTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	52692146	52658412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_52662342_52688747_52688901_52692019
ES.9233.1	chr13	-	1848	5	Intergenic	novelGene_7527	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	1.58113883008419	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCTTTGGGTCATGAT	8281	False	NA	-4	True	NA	NA	NA	52727321	52708392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52709757_52709963_52710015_52714215_52714317_52715084_52715256_52727160
ES.9233.2	chr13	-	5459	3	Intergenic	novelGene_7526	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_2	2.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCTTTGGGTCATGAT	NA	False	NA	-4	True	NA	NA	NA	52714139	52708392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52709757_52709963_52713045_52713125
ES.9234.1	chr13	+	4891	13	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-459	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.5029548969675	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACCTTTACGGATGC	NA	False	NA	NA	False	AATAAA	-18	NA	52736749	52802824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52736784_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.10	chr13	+	5177	14	NIC	ENSMUSG00000021457.15	novel	5122	14	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	26.5171597897212	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGATGACCTTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	52737412	52802818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.11	chr13	+	3928	15	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-13	-1271	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	29.2302610878744	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTGCTACATTGTCA	NA	False	NA	32	True	NA	NA	NA	52737459	52801547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.12	chr13	+	4990	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	27.2824730061872	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGATGACCTTTACG	NA	False	NA	NA	False	AATAAA	-13	NA	52737459	52802819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52799758
ES.9234.13	chr13	+	2761	13	NNC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	0	1128	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.473832949336	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGGTAGCAGAAGATA	NA	False	NA	NA	False	NA	NA	NA	52737472	52798778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52797977
ES.9234.14	chr13	+	2314	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	22	-86	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGAGTTTGTGATCCCTG	NA	False	NA	NA	False	NA	NA	NA	52737494	52797564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
ES.9234.15	chr13	+	3922	15	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	22	-1281	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	31.1143381870212	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAAGTTATTTTGTTGC	NA	False	NA	22	True	NA	NA	NA	52737494	52801537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778852_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.16	chr13	+	3387	13	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	28	-1283	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.2813408834915	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGAAGTTATTTTGTT	NA	False	NA	20	True	NA	NA	NA	52737500	52801535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52737642_52765153_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.17	chr13	+	2425	6	ISM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	292	24103	28	350	5prime_fragment	FALSE	canonical	3	55	junction_1	5.71314274283428	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTTGTGGTTTCTAGAC	NA	False	NA	NA	False	ACTAAA	-16	NA	52737500	52778725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280
ES.9234.18	chr13	+	5061	14	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	27.7770072213965	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACCTTTACGGATGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	52737527	52802826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778111_52778200_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.19	chr13	+	4171	12	NIC	ENSMUSG00000021457.15	novel	2519	13	NA	NA	0	1815	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.5124625838599	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTAGATGGTGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	52737538	52799465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
ES.9234.2	chr13	+	5743	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-448	1	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTACGGATGCAGACA	NA	False	NA	NA	False	AATAAA	-23	NA	52736760	52802829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.20	chr13	+	3770	14	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	0	-1281	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	26.5171597897212	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAAGTTATTTTGTTGC	NA	False	NA	22	True	NA	NA	NA	52737538	52801537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.21	chr13	+	894	3	ISM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	331	36163	1	-1056	5prime_fragment	FALSE	canonical	3	55	junction_1	5.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAAATGGTGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	52737539	52766665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_52737642_52764831_52765289_52766330
ES.9234.22	chr13	+	3559	12	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	1	-1281	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	23.1638076203174	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAAGTTATTTTGTTGC	NA	False	NA	22	True	NA	NA	NA	52737539	52801537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52799758
ES.9234.23	chr13	+	5886	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	4	926	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAGAACACTCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	52737542	52803754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.25	chr13	+	2308	4	ISM	ENSMUSG00000021457.15	ENSMUST00000055087.7	5122	14	43665	1283	43559	-1283	3prime_fragment	FALSE	canonical	3	54	junction_3	17.2819751957543	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGAAGTTATTTTGTT	NA	False	NA	20	True	NA	NA	NA	52794553	52801535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.3	chr13	+	4423	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	-417	-1278	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTATTTTGTTGCTAC	NA	False	NA	25	True	NA	NA	NA	52736791	52801540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.4	chr13	+	2934	13	ISM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	-184	5183	-184	-5	5prime_fragment	FALSE	canonical	3	17	junction_6	23.0487104965886	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAACAATCTCTGAGCCA	NA	False	NA	NA	False	ATTAAA	-26	NA	52737024	52797645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
ES.9234.5	chr13	+	5479	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	-125	9	-125	1	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGATGACCTTTACG	NA	False	NA	NA	False	AATAAA	-13	NA	52737083	52802819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.7	chr13	+	4103	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	-31	1291	-31	-1281	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAAGTTATTTTGTTGC	NA	False	NA	22	True	NA	NA	NA	52737177	52801537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9234.8	chr13	+	3712	13	NNC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	0	1815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	23.473832949336	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTAGATGGTGTCTGAG	NA	False	NA	NA	False	NA	NA	NA	52737208	52799465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52797977
ES.9234.9	chr13	+	5281	15	NIC	ENSMUSG00000021457.15	novel	5122	14	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	29.2302610878744	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGATGACCTTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	52737377	52802818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ES.9235.1	chr13	-	177	1	Intergenic	novelGene_7528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGAGAGAGAGAGTT	NA	False	NA	NA	False	NA	NA	NA	52747298	52747121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_52747100_52747300
ES.9236.1	chr13	+	868	2	Intergenic	novelGene_7529	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCATTTGTGTTCTTGG	NA	False	NA	NA	False	NA	NA	NA	52928917	52932574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_52929034_52931822
ES.9237.1	chr13	+	1556	1	Antisense	novelGene_ENSMUSG00000021460.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACAAACAAACAAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	53064868	53066424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_53064900_53066400
ES.9238.1	chr13	-	1513	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	9	-202	0	202	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGAGAATCCGCGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	53083688	52988952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.10	chr13	-	1175	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	4	-5	combination_of_known_splicesites	FALSE	canonical	3	8	junction_7	96.7127030889713	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53083713	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53083490
ES.9238.11	chr13	-	736	5	NIC	ENSMUSG00000021460.18	novel	1258	10	NA	NA	211	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	127.16328086362	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53073057	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53073036
ES.9238.12	chr13	-	5464	1	Intergenic	novelGene_7530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGAAGTATACTGGC	NA	False	NA	NA	False	NA	NA	NA	53033205	53027741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53027700_53033200
ES.9238.13	chr13	-	2097	7	NNC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	0	10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	169.345800066019	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTCTGCTGTTGTGAT	NA	False	NA	7	True	AATAAA	-27	NA	53083697	53040453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53082301_53082976_53083490
ES.9238.14	chr13	-	4698	1	NIC	ENSMUSG00000021460.18	novel	1258	10	NA	NA	14001	1679	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTCCCTTCCATTCTC	NA	False	NA	NA	False	NA	NA	NA	53052981	53048283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53048300_53053000
ES.9238.15	chr13	-	4809	4	ISM	ENSMUSG00000021460.18	ENSMUST00000128380.8	1400	6	0	7850	0	1649	5prime_fragment	FALSE	canonical	3	287	junction_1	84.7204553549823	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53083684	53048313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.16	chr13	-	1587	6	NNC	ENSMUSG00000021460.18	novel	1647	5	NA	NA	-862	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	193.109709750701	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGGGTAGTGGTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	53074166	53049960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53051169_53052685_53052773_53060570_53060642_53073036_53073125_53073234_53073303_53074101
ES.9238.17	chr13	-	2809	5	NIC	ENSMUSG00000021460.18	novel	2627	4	NA	NA	0	21	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	206.970257525085	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTGGAGCGTATTCAT	NA	False	NA	-3	True	AATAAA	-38	NA	53083697	53061059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53063352_53066943_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.18	chr13	-	2493	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	136	-2	-60	2	multi-exon	FALSE	canonical	3	17	junction_1	210.944437128727	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGCTGCTCTCTCACT	NA	False	NA	-22	True	AATAAA	-19	NA	53083554	53061078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
ES.9238.19	chr13	-	2678	4	NIC	ENSMUSG00000021460.18	novel	2627	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	215.643223867573	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	False	NA	-24	True	AATAAA	-17	NA	53083699	53061080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53063394_53073036_53073125_53073234_53073303_53083490
ES.9238.2	chr13	-	5291	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	-3	17	intron_retention	FALSE	canonical	3	269	junction_1	86.7685168145917	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGCTGAGTAATTAT	NA	False	NA	3	True	AATAAA	-39	NA	53083693	52989137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.20	chr13	-	2512	4	NNC	ENSMUSG00000021460.18	novel	2627	4	NA	NA	-5	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	218.93276492009	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGAGGCTGCTCT	NA	False	NA	-28	True	AATAAA	-13	NA	53083702	53061084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53063229_53073036_53073125_53073234_53073303_53083490
ES.9238.21	chr13	-	3217	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	21	-3	1	3	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGGTCACAGTGCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	53083696	53064242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.22	chr13	-	3124	5	NNC	ENSMUSG00000021460.18	novel	3235	4	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	206.970257525085	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGGTCACAGTGCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	53083701	53064242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53065471_53065568_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.23	chr13	-	801	5	NIC	ENSMUSG00000021460.18	novel	3235	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	206.970257525085	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTGGTCACAGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	53083684	53064245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53064543_53066943_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.24	chr13	-	2259	1	ISM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	17101	112	366	1	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCATGAGTTGAATTTG	NA	False	NA	0	True	AATAAA	-21	NA	53066616	53064357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53064400_53066600
ES.9238.25	chr13	-	646	5	NNC	ENSMUSG00000021460.18	novel	3235	4	NA	NA	-89	-27	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	201.986849819487	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAGCAAAACCACA	NA	False	NA	-28	True	NA	NA	NA	53083583	53064385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53064629_53066943_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.26	chr13	-	2206	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	33	996	0	-883	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTGAGTCATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	53083684	53065241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.27	chr13	-	595	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	11	2629	-9	10	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGGCGCTCATGAG	NA	False	NA	0	True	AATAAA	-25	NA	53083706	53066874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ES.9238.28	chr13	-	5036	3	ISM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	11	4127	-9	-1488	5prime_fragment	FALSE	canonical	3	442	junction_2	21	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACTTTGTCTCCTCAGA	NA	False	NA	NA	False	NA	NA	NA	53083706	53068372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53073125_53073234_53073303_53083490
ES.9238.3	chr13	-	1358	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	-24	-14	-4	14	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAGTTGCTGAGTAAT	NA	False	NA	0	True	AATAAA	-36	NA	53083721	52989140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.4	chr13	-	3853	9	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	269	junction_2	82.4172880832656	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	-14	True	AATAAA	-22	NA	53083696	52989154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.5	chr13	-	1182	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	3	-5	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	139.021948054314	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53083714	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.6	chr13	-	1209	9	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	135.306827248295	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53083684	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9238.8	chr13	-	3435	10	NNC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	-2	-5	intron_retention	FALSE	canonical	2	4	junction_8	142.344999088244	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53083719	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_52989588_52992121_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53082301_53082976_53083490
ES.9238.9	chr13	-	1263	9	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	1	-5	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	135.498097311364	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAAGTTATACCA	NA	False	NA	-19	True	AATAAA	-17	NA	53083696	52989159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_52989588_52992121_52992170_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ES.9239.1	chr13	+	2211	1	Antisense	novelGene_ENSMUSG00000056749.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTGTTTTTCACTCCGA	NA	False	NA	NA	False	AATAAA	-26	NA	53121810	53124021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_53121800_53124000
ES.924.1	chr1	-	1200	1	Antisense	novelGene_ENSMUSG00000026240.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTCCCTAACATGCTA	NA	False	NA	NA	False	NA	NA	NA	86526729	86525529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_86525500_86526700
ES.9240.1	chr13	-	2102	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	-77	1	-77	-1	multi-exon	FALSE	canonical	3	64	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGGCTCTGTTCCACT	NA	False	NA	0	True	AATAAA	-18	NA	53135186	53121245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53123058_53134896
ES.9240.2	chr13	-	2186	3	NNC	ENSMUSG00000056749.8	novel	2026	2	NA	NA	-31	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGGCTCTGTTCCACT	NA	False	NA	0	True	AATAAA	-18	NA	53135140	53121245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53123058_53131682_53131813_53134896
ES.9241.1	chr13	+	3296	1	Antisense	novelGene_ENSMUSG00000021464.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAAACCCTAATCTCTCA	NA	False	NA	NA	False	NA	NA	NA	53263202	53266498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_53263200_53266500
ES.9242.1	chr13	+	3461	4	Antisense	novelGene_ENSMUSG00000021464.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	4.02768199119819	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCTTTCTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	53338461	53348911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_53338633_53339455_53339592_53345505_53345681_53345932
ES.9242.2	chr13	+	1381	2	Antisense	novelGene_ENSMUSG00000021464.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGACTTATCAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	53339506	53340976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_53339592_53339680
ES.9243.1	chr13	-	4316	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	15	-346	15	341	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGACAGGCACCCTTTT	NA	False	NA	NA	False	AAGAAA	-22	NA	53440145	53263006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.10	chr13	-	3928	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	52.4391015846	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440153	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271204_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285799_53286074_53300669_53300748_53439816
ES.9243.12	chr13	-	3896	9	NNC	ENSMUSG00000021464.16	novel	3730	9	NA	NA	40954	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	40.3993734481118	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53388740	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53388483
ES.9243.13	chr13	-	3993	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-88	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	43.404598646612	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440248	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53439816
ES.9243.15	chr13	-	5323	7	ISM	ENSMUSG00000021464.16	ENSMUST00000130235.9	3730	9	151749	8	141858	-3	3prime_fragment	FALSE	canonical	3	114	junction_5	5.5502752684489	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGTGTATTATCTCT	NA	False	NA	-31	True	NA	NA	NA	53287836	53263355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785
ES.9243.18	chr13	-	3703	7	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-88	-51	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	46.5677523137585	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTTTTCATGGAAGTGT	NA	False	NA	15	True	AAAAAG	-44	NA	53440248	53263403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53300669_53300748_53439816
ES.9243.19	chr13	-	3958	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-50	77	-50	-77	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAATTTATATGGTTT	NA	False	NA	-11	True	AAAAAG	-18	NA	53440210	53263429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.2	chr13	-	4199	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-188	-26	-188	21	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACTGCGGGTGTGTCTG	NA	False	NA	-2	True	NA	NA	NA	53440348	53263326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.20	chr13	-	3509	9	NNC	ENSMUSG00000021464.16	novel	3730	9	NA	NA	40718	-193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	41.0561734091233	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTGGAATTCAAAGGAA	NA	False	NA	59	True	NA	NA	NA	53388976	53263545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53388915
ES.9243.21	chr13	-	3898	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	-107	194	-107	-194	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTGGAATTCAAAGGA	NA	False	NA	58	True	NA	NA	NA	53440267	53263546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.22	chr13	-	3634	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	22	-251	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	43.404598646612	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGATTTTGTATTTTTGT	NA	False	NA	1	True	ATTAAA	-32	NA	53440138	53263603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53439816
ES.9243.23	chr13	-	3504	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-88	-254	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	42.1595608543136	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACGATTTTGTATTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	53440248	53263606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53271417_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.24	chr13	-	3688	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	6	-254	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.4349400271597	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACGATTTTGTATTTT	NA	False	NA	-2	True	ATTAAA	-29	NA	53440154	53263606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271380_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.25	chr13	-	4448	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-84	-256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.4349400271597	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCACGATTTTGTATT	NA	False	NA	-4	True	ATTAAA	-27	NA	53440244	53263608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272091_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.26	chr13	-	3496	9	NNC	ENSMUSG00000021464.16	novel	3730	9	NA	NA	115220	-261	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	35.4788669492136	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAACCAGCACGATTTT	NA	False	NA	-9	True	ATTAAA	-22	NA	53314474	53263613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53314358
ES.9243.27	chr13	-	5046	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-13	-262	intron_retention	FALSE	canonical	3	114	junction_4	4.59369576880387	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAACCAGCACGATTT	NA	False	NA	-10	True	ATTAAA	-21	NA	53440173	53263614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.28	chr13	-	203	1	Intergenic	novelGene_7531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCTAATGACTGTATG	NA	False	NA	0	True	NA	NA	NA	53344592	53344389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53344400_53344600
ES.9243.29	chr13	-	7080	1	Intergenic	novelGene_7532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTAGGGACCACACTGG	9755	False	NA	NA	False	NA	NA	NA	53405071	53397991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53398000_53405100
ES.9243.3	chr13	-	3767	9	NNC	ENSMUSG00000021464.16	novel	3730	9	NA	NA	115215	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	35.4788669492136	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATCTCTGGGATACC	NA	False	NA	-23	True	NA	NA	NA	53314479	53263347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53314358
ES.9243.30	chr13	-	4353	1	Intergenic	novelGene_7533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCTCACAGATAAGGC	6024	False	NA	NA	False	NA	NA	NA	53408802	53404449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53404400_53408800
ES.9243.4	chr13	-	4028	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	39.2651244745257	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53440237	53263352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271204_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9243.5	chr13	-	3730	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	115213	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	49.0406400345672	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53314481	53263352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271204_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53314358
ES.9243.6	chr13	-	3744	9	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	98215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	52.6278205894943	230	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53331479	53263352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271204_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53331342
ES.9243.7	chr13	-	4178	11	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.1369753371163	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440093	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53296906_53297037_53299416_53299549_53300669_53300748_53439816
ES.9243.8	chr13	-	4201	10	NNC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-74	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	51.1246358917277	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440234	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53299404_53299549_53300669_53300748_53439816
ES.9243.9	chr13	-	5293	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	0	-2	intron_retention	FALSE	canonical	3	114	junction_4	4.59369576880387	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGTGTATTATCTCTG	NA	False	NA	-30	True	NA	NA	NA	53440160	53263354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53265705_53267083_53267287_53271170_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ES.9244.1	chr13	-	169	1	Intergenic	novelGene_7534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53484162	53483993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53484000_53484200
ES.9245.10	chr13	-	2942	16	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	66.3741582913779	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	1876	False	NA	-22	True	AATAAA	-23	NA	53531386	53486787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53501145_53501312_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531107
ES.9245.14	chr13	-	4528	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	36560	6	36511	-6	3prime_fragment	FALSE	canonical	3	189	junction_1	0.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGGAGTCTGTTTGGA	NA	False	NA	-24	True	AATAAA	-21	NA	53494873	53486789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53488014_53489376_53489451_53491643
ES.9245.15	chr13	-	2547	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-7	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.8250813473522	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTGAAAAGGAGTCTGT	1871	False	NA	-29	True	AATAAA	-16	NA	53531391	53486794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527454_53527997_53528106_53531328
ES.9245.16	chr13	-	2511	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	5	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	44.1207179803552	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCCTGAAAAGGAGTCT	1866	False	NA	-31	True	AATAAA	-14	NA	53531396	53486796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521414_53521939_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.17	chr13	-	2353	13	NIC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	2	-15	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	46.9979313965578	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTCCTGAAAAGGAGT	1863	False	NA	-33	True	AATAAA	-12	NA	53531399	53486798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.18	chr13	-	4041	13	NIC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	5	-355	intron_retention	FALSE	canonical	3	146	junction_9	13.8751876864183	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAGGGATGCTCTAAA	1866	False	NA	NA	False	TATAAA	-16	NA	53531396	53487138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53497261_53497814_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.19	chr13	-	2100	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	31	475	-1	-475	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTCCAATGTCCTTTT	1860	False	NA	-3	True	AATACA	-23	NA	53531402	53487258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.2	chr13	-	4231	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-4	1674	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	43.9194531767751	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGATGGGTATGTTTAGTCC	1874	False	NA	NA	False	NA	NA	NA	53531388	53485109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527368_53527460_53527997_53528106_53531328
ES.9245.20	chr13	-	4780	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	35838	476	35789	-476	3prime_fragment	FALSE	canonical	3	189	junction_1	0.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATGTCCAATGTCCTTT	NA	False	NA	-4	True	AATACA	-22	NA	53495595	53487259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_53488014_53489376_53489451_53491643
ES.9245.21	chr13	-	2302	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-8	-484	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	43.1367072248692	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTCTAATATGTCCAA	1870	False	NA	-12	True	AATACA	-14	NA	53531392	53487267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531107
ES.9245.22	chr13	-	2799	14	NIC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-8	-692	intron_retention	FALSE	canonical	3	146	junction_10	13.3323471035651	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTAGGACTCTATGTGCT	1870	False	NA	NA	False	TATAAA	-18	NA	53531392	53487475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.23	chr13	-	1673	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	39	894	7	-894	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGTCGTCTGTGGGA	1868	False	NA	NA	False	TTTAAA	-17	NA	53531394	53487677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.24	chr13	-	964	9	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-4	-14347	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.9380534209561	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCATCTTCCTGTTTTT	1874	False	NA	NA	False	NA	NA	NA	53531388	53501130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53501312_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.3	chr13	-	4079	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	34	-1507	2	1507	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACAACAACATGTTAGC	1863	False	NA	NA	False	NA	NA	NA	53531399	53485276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.4	chr13	-	4047	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-6	1473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	43.9194531767751	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGCCTCTGT	1855	False	NA	NA	False	NA	NA	NA	53531407	53485310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527370_53527460_53527997_53528106_53531328
ES.9245.5	chr13	-	2701	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	29	-124	-3	124	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGACTATGTACTAT	1858	False	NA	NA	False	ACTAAA	-25	NA	53531404	53486659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.6	chr13	-	2653	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	-29	-18	-29	18	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGCTCAGCTCAGCAGT	1800	False	NA	0	True	AATAAA	-45	NA	53531462	53486765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ES.9245.7	chr13	-	4144	7	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	25704	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.0171940074702	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGCAGCTTGCTCAGC	NA	False	NA	-8	True	AATAAA	-37	NA	53505680	53486773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53497163_53497261_53497814_53497911_53498836_53501312_53505636
ES.9245.8	chr13	-	2795	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	43.1367072248692	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	1861	False	NA	-18	True	AATAAA	-27	NA	53531401	53486783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531107
ES.9245.9	chr13	-	2771	15	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	44.1199663255926	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	1871	False	NA	-22	True	AATAAA	-23	NA	53531391	53486787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531117
ES.9246.1	chr13	+	5790	8	NNC	ENSMUSG00000107008.4	novel	568	5	NA	NA	-36	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTACCTGTTAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	53547656	53556974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_53547767_53548181_53548421_53549320_53549432_53549599_53549822_53549949_53550039_53550717_53550777_53551934_53552885_53552964
ES.9247.1	chr13	+	175	1	Intergenic	novelGene_7535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTAAATGATTA	NA	False	NA	NA	False	NA	NA	NA	53597267	53597442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_53597300_53597400
ES.9248.1	chr13	+	179	1	Intergenic	novelGene_7536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	53611416	53611595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_53611400_53611600
ES.9249.1	chr13	-	2231	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	225	-3	225	3	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCTGTCCCAACTCACA	NA	False	NA	NA	False	ATTAAA	-21	NA	53626885	53620916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_53622630_53626367
ES.925.1	chr1	+	286	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGTATGGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	86578642	86578928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_86578600_86578900
ES.9250.1	chr13	-	201	1	Intergenic	novelGene_7537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATAATGAGATGCGG	NA	False	NA	NA	False	NA	NA	NA	53704029	53703828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_53703800_53704000
ES.9251.1	chr13	+	155	1	Intergenic	novelGene_7538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	54017627	54017782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54017600_54017800
ES.9252.1	chr13	+	3683	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-129	4	intron_retention	FALSE	canonical	3	779	junction_1	57.8715051740588	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225758	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.10	chr13	+	2862	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	350.224626855677	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225864	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54244464_54244525_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.11	chr13	+	2621	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-23	-251	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	798	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACGAAAATTGGCAATCT	NA	False	NA	109	True	NA	NA	NA	54225864	54262110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.12	chr13	+	2963	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-22	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	354.769136898727	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225865	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258062_54258225_54258820_54258871_54259766_54259815_54260525
ES.9252.13	chr13	+	1246	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-22	1559	-22	-1559	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCTGGTAGATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	54225865	54260802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.14	chr13	+	11596	9	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-21	4	intron_retention	FALSE	canonical	3	779	junction_1	59.9348604736843	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225866	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54248001_54250749_54258871_54259766_54259815_54260525
ES.9252.15	chr13	+	2905	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	355.341390964002	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225866	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54251366_54251472_54258820_54258871_54259766_54259815_54260525
ES.9252.16	chr13	+	2849	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-18	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	281.015230903949	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225869	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247828_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.17	chr13	+	3403	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	402.632884485882	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225875	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.18	chr13	+	1970	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-12	-1576	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	360.970081862749	786	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	54225875	54260785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258062_54258871_54259766_54259815_54260525
ES.9252.19	chr13	+	2579	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-11	-274	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	396.206432545059	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	86	True	NA	NA	NA	54225876	54262087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.2	chr13	+	2898	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-111	-4	-111	4	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225776	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.21	chr13	+	2806	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	278.894047982383	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACAAACTGTCTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	54225876	54262355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258802_54258871_54259766_54259815_54260525
ES.9252.22	chr13	+	2783	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-11	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	279.081726381359	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225876	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243072_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.23	chr13	+	2800	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-10	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	278.894047982383	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225877	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258809_54258871_54259766_54259815_54260525
ES.9252.24	chr13	+	2806	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-4	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	279.081726381359	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225883	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243094_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.25	chr13	+	1947	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-1	837	-1	-837	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGTTTCTGTAGGTTAT	NA	False	NA	NA	False	AAAACA	-19	NA	54225886	54261524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.26	chr13	+	3536	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	278.011078915931	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54225888	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258062_54258871_54259766_54259815_54260525
ES.9252.27	chr13	+	4949	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	4	intron_retention	FALSE	canonical	3	779	junction_1	57.139422295355	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225888	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.28	chr13	+	2767	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	280.285229721439	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225888	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247038_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.29	chr13	+	2501	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	-274	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	264.208800004845	797	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	86	True	NA	NA	NA	54225888	54262087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.30	chr13	+	5716	9	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	4	intron_retention	FALSE	canonical	3	779	junction_1	60.2468878864295	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225888	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54245341_54246391_54246468_54247019_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.31	chr13	+	2881	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	355.341390964002	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225888	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258509_54258605_54258820_54258871_54259766_54259815_54260525
ES.9252.32	chr13	+	2835	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	11	4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	396.206432545059	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225898	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.34	chr13	+	3265	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	11	-274	intron_retention	FALSE	canonical	3	779	junction_1	57.8715051740588	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	86	True	NA	NA	NA	54225898	54262087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.36	chr13	+	2847	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	397.425350337531	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACAAACTGTCTCTTA	NA	False	NA	NA	False	AATAAA	-12	NA	54225901	54262355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258802_54258871_54259766_54259815_54260525
ES.9252.37	chr13	+	2495	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	14	274	14	-274	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	86	True	NA	NA	NA	54225901	54262087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.38	chr13	+	2861	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	14	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	347.641427311923	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225901	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247549_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.39	chr13	+	5522	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	14	4	intron_retention	FALSE	canonical	3	779	junction_1	57.0654811230263	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225901	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.4	chr13	+	2667	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	-53	169	-53	-169	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGTGCGGCGACTCA	NA	False	NA	NA	False	AAAAAG	-16	NA	54225834	54262192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.40	chr13	+	2720	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	17	4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	290.095812184377	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225904	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54258820_54258871_54259766_54259815_54260525
ES.9252.41	chr13	+	2896	13	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	17	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	420.311656855825	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225904	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54244464_54244525_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.43	chr13	+	1938	3	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	389.5	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225913	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239528_54260525
ES.9252.44	chr13	+	3295	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	30	4	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.023031533481	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225917	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.45	chr13	+	6509	9	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	30	4	intron_retention	FALSE	canonical	3	14	junction_1	302.692087772376	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225917	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.46	chr13	+	3273	13	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	31	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	430.10664052328	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225918	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226290_54226376_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.47	chr13	+	3041	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	31	-249	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.023031533481	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAATTGGCAATCTTT	NA	False	NA	NA	False	NA	NA	NA	54225918	54262112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.48	chr13	+	5456	10	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	32	4	intron_retention	FALSE	canonical	3	14	junction_1	289.429366209947	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225919	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.49	chr13	+	3266	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	36	-26	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	373.996524048018	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAATAAAGAAATGCAGAA	NA	False	NA	NA	False	NA	NA	NA	54225923	54262335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259759_54259815_54260525
ES.9252.50	chr13	+	3348	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	37	4	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	408.51952015431	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225924	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54244464_54244525_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.52	chr13	+	4939	1	Intergenic	novelGene_7539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	684	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGAATTCTGTGAAAGC	NA	False	NA	NA	False	NA	NA	NA	54230443	54235382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54230400_54235400
ES.9252.53	chr13	+	2716	10	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	13579	4	-498	-4	3prime_fragment	FALSE	canonical	3	858	junction_8	32.8299020579685	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54239466	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.54	chr13	+	2911	9	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-1964	-4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	385.034008238233	801	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54244765	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.55	chr13	+	6392	1	Genic_Genomic	ENSMUSG00000021474.10	novel	NA	NA	NA	NA	9244	4	mono-exon	FALSE	NA	NA	NA	NA	NA	798	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54255973	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_54256000_54262400
ES.9252.56	chr13	+	5371	2	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	30203	4	9361	-4	intron_retention	FALSE	canonical	3	858	junction_1	0	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAACTGTCTCTTACT	NA	False	NA	NA	False	AATAAA	-14	NA	54256090	54262357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54258871_54259766
ES.9252.6	chr13	+	2826	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-46	4	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	264.208800004845	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225841	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.7	chr13	+	2897	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-44	4	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225843	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.8	chr13	+	2774	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-31	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	268.653883446544	802	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225856	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54225952_54239467_54239643_54242907_54242994_54243037_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9252.9	chr13	+	6032	9	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	-31	4	intron_retention	FALSE	canonical	3	779	junction_1	57.4531058777504	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	False	NA	NA	False	AATAAA	-22	NA	54225856	54262365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54225952_54239467_54239643_54242907_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ES.9253.1	chr13	+	176	1	Intergenic	novelGene_7540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCTAGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	54327004	54327180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54327000_54327200
ES.9254.1	chr13	-	176	1	Intergenic	novelGene_7541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGTAACGGT	NA	False	NA	NA	False	NA	NA	NA	54425055	54424879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54424900_54425100
ES.9255.1	chr13	-	2905	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-3265	3	intron_retention	FALSE	canonical	1	2	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTATGTGTTTGTTTT	NA	False	NA	NA	False	AATATA	-15	NA	54485164	54463920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54466497_54481726_54481884_54484992
ES.9255.2	chr13	-	2831	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-4638	0	intron_retention	FALSE	canonical	1	2	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTTATGTGTTTGT	NA	False	NA	NA	False	AATATA	-12	NA	54486537	54463923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54466497_54481726_54481884_54486436
ES.9255.3	chr13	-	2765	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-2772	0	intron_retention	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTTATGTGTTTGT	NA	False	NA	NA	False	AATATA	-12	NA	54484671	54463923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54466497_54481757_54481884_54484605
ES.9255.4	chr13	-	962	3	NNC	ENSMUSG00000113404.2	novel	2746	2	NA	NA	-3261	-5893	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATACGATGAAAGCAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	54485160	54469816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54470454_54481726_54481884_54484992
ES.9255.5	chr13	-	384	2	Intergenic	novelGene_7542	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGGTGACTTATACCT	NA	False	NA	NA	False	AATAAA	-18	NA	54486572	54485567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54485816_54486436
ES.9256.1	chr13	+	158	1	Intergenic	novelGene_7543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTAAATAAATCTTTGG	2190	False	NA	NA	False	NA	NA	NA	54583889	54584047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54583900_54584000
ES.9257.1	chr13	-	2632	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	-287	-10	-287	10	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTACTATCTTTATTCC	NA	False	NA	7	True	AATAAA	-25	NA	54616949	54606639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ES.9257.10	chr13	-	7023	3	NIC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	5	-986	intron_retention	FALSE	canonical	3	522	junction_1	13.5	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACCAAAACGGCCCAA	NA	False	NA	NA	False	TATAAA	-45	NA	54616657	54607635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54614198_54615638_54615796_54616353
ES.9257.2	chr13	-	5526	5	NIC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	53	0	intron_retention	FALSE	canonical	3	14	junction_3	221.919326558099	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	54616548	54606649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54611386_54611494_54611657_54613992_54614269_54615638_54615796_54616353
ES.9257.3	chr13	-	2394	6	NIC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	215.338802820114	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGTGTCTAAAGTTACT	NA	False	NA	-4	True	AATAAA	-14	NA	54616651	54606650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614269_54615638_54615796_54616353
ES.9257.6	chr13	-	3144	6	NNC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	11	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	272.224466203903	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGTGTCTAAAGTTACT	NA	False	NA	-4	True	AATAAA	-14	NA	54616651	54606650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54608051_54611284_54611386_54611494_54612407_54613992_54614269_54615638_54615796_54616353
ES.9257.7	chr13	-	1548	6	NNC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	11	-680	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	218.358787320318	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGTTTGTCTGTGTA	NA	False	NA	NA	False	NA	NA	NA	54616651	54607329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616449
ES.9257.8	chr13	-	1635	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	17	683	-6	-683	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACATCTGTTTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	54616645	54607332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ES.9257.9	chr13	-	1376	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	-27	986	-27	-986	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACCAAAACGGCCCAA	NA	False	NA	NA	False	TATAAA	-45	NA	54616689	54607635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ES.9258.1	chr13	-	160	1	Intergenic	novelGene_7544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54624729	54624569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54624600_54624700
ES.9259.1	chr13	-	239	1	Intergenic	novelGene_7545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54627117	54626878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54626900_54627100
ES.926.1	chr1	+	3274	22	FSM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	-119	-1	-108	1	multi-exon	FALSE	canonical	3	10	junction_6	26.8303649010897	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86631421	86977818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.10	chr1	+	3004	21	NNC	ENSMUSG00000053333.16	novel	3154	22	NA	NA	48069	1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	37.7039785699069	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGATGCCATGG	NA	False	NA	16	True	AATAAA	-17	NA	86679633	86977818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86679764_86681948_86682003_86688009_86688112_86719137_86719180_86740233_86740312_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.11	chr1	+	3041	20	NNC	ENSMUSG00000053333.16	novel	3154	22	NA	NA	54490	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.7723438482076	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGTCTGTGTAGATG	NA	False	NA	10	True	AATAAA	-11	NA	86686054	86977812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86686168_86686482_86686610_86688009_86688112_86694851_86694959_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.12	chr1	+	4825	1	NIC	ENSMUSG00000053333.16	novel	3154	22	NA	NA	21109	865	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTATGACTCTGCTAA	NA	False	NA	NA	False	NA	NA	NA	86806201	86811026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_86806200_86811000
ES.926.13	chr1	+	5454	1	Genic_Genomic	ENSMUSG00000053333.16	novel	NA	NA	NA	NA	192188	4917	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTCATTTGTCTG	NA	False	NA	NA	False	AATAAA	-29	NA	86977280	86982734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_86977300_86982700
ES.926.2	chr1	+	3229	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-139	-5	-104	2	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTAGATGCCATGGG	NA	False	NA	17	True	AATAAA	-18	NA	86631425	86977819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.3	chr1	+	1174	4	FSM	ENSMUSG00000053333.16	ENSMUST00000188121.7	1173	4	-3	2	-3	-2	multi-exon	FALSE	canonical	0	0	junction_3	49.2769948578667	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTACTTTTCTTTATAA	NA	False	NA	NA	False	AATAAA	-13	NA	86631526	86676051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86675250
ES.926.4	chr1	+	2290	16	NNC	ENSMUSG00000053333.16	novel	3085	21	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	25.7857841972407	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTAGATGCCAT	NA	False	NA	14	True	AATAAA	-15	NA	86631527	86977816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971802_86977484
ES.926.5	chr1	+	3934	22	NNC	ENSMUSG00000053333.16	novel	3154	22	NA	NA	-1	0	intron_retention	FALSE	canonical	0	0	junction_5	34.7337785757562	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTGTAGATGCCATG	NA	False	NA	15	True	AATAAA	-16	NA	86631528	86977817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86694851_86694959_86740233_86740312_86748947_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.7	chr1	+	2825	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	-15	275	0	-275	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATTTTTAATTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	86631549	86977539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.8	chr1	+	3172	21	NNC	ENSMUSG00000053333.16	novel	1173	4	NA	NA	15717	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.7632068542947	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGTGTAGATGCC	NA	False	NA	12	True	AATAAA	-13	NA	86647281	86977814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_86647398_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.926.9	chr1	+	2906	19	ISM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	41496	4	41496	-4	3prime_fragment	FALSE	canonical	3	71	junction_3	11.414199517149	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGCTGTCTGTGTAGA	NA	False	NA	8	True	AATAAA	-9	NA	86673060	86977810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ES.9260.1	chr13	-	243	1	Intergenic	novelGene_7546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGAAATCTGCTGTT	NA	False	NA	NA	False	NA	NA	NA	54640505	54640262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54640300_54640500
ES.9261.1	chr13	-	157	1	FSM	ENSMUSG00000086567.2	ENSMUST00000140330.2	385	1	342	-114	342	114	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAAGTACACT	NA	False	NA	-14	True	AATAAA	-14	NA	54647560	54647403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54647400_54647600
ES.9261.2	chr13	-	115	2	Genic_Genomic	ENSMUSG00000086567.2	novel	385	1	NA	NA	345	113	multi-exon	FALSE	non_canonical	2	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAAAAAAAAAAAGTACAC	NA	False	NA	-15	True	AATAAA	-13	NA	54647557	54647404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_54647486_54647523
ES.9262.1	chr13	-	153	1	Intergenic	novelGene_7547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	54648136	54647983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54648000_54648100
ES.9263.1	chr13	+	5077	9	NIC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-46	99	intron_retention	FALSE	canonical	3	30	junction_1	6.59426834455499	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGCAGTGATATGCAC	NA	False	NA	NA	False	AATATA	-45	NA	54651545	54698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54651818_54671782_54674486_54676116_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.10	chr13	+	4507	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-10	99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.3626169645669	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGCAGTGATATGCAC	NA	False	NA	NA	False	AATATA	-45	NA	54651606	54698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54695914_54696023_54698195
ES.9263.11	chr13	+	3310	3	ISM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	15	22591	-10	4440	5prime_fragment	FALSE	canonical	3	30	junction_1	2	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAATGACTTATTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	54651606	54676512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54651818_54671782_54674486_54676116
ES.9263.12	chr13	+	4907	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	15.3626169645669	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	NA	False	NA	12	True	AATAAA	-12	NA	54651606	54699098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54695914_54696023_54698195
ES.9263.13	chr13	+	4559	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-10	99	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.6320184237353	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGCAGTGATATGCAC	NA	False	NA	NA	False	AATATA	-45	NA	54651606	54698698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54660125_54660286_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.14	chr13	+	4738	10	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-10	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.2948290280971	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	NA	False	NA	12	True	AATAAA	-12	NA	54651606	54699098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54675074_54675247_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.15	chr13	+	4976	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.4587362819871	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651606	54699103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54675074_54675247_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.16	chr13	+	4471	10	NIC	ENSMUSG00000043183.19	novel	840	3	NA	NA	43	97	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	12.4255809412838	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGGCAGTGATATGC	NA	False	NA	NA	False	AATATA	-43	NA	54660000	54698696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54660286_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.17	chr13	+	538	1	Intergenic	novelGene_7548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAAATCCCACC	NA	False	NA	NA	False	NA	NA	NA	54667497	54668035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54667500_54668000
ES.9263.18	chr13	+	3536	4	NIC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-4454	1	intron_retention	FALSE	canonical	3	34	junction_1	4.71404520791032	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54672295	54687787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54674486_54676116_54677037_54684894_54685050_54687516
ES.9263.19	chr13	+	2910	7	NIC	ENSMUSG00000043183.19	novel	2116	9	NA	NA	-1041	-5	intron_retention	FALSE	canonical	3	32	junction_3	6.21154838452807	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	NA	False	NA	12	True	AATAAA	-12	NA	54675708	54699098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.2	chr13	+	5011	11	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	15.2446712001276	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651552	54699103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54660132_54660286_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.20	chr13	+	179	1	Intergenic	novelGene_7549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGTT	NA	False	NA	NA	False	NA	NA	NA	54679866	54680045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54679900_54680000
ES.9263.21	chr13	+	2810	2	ISM	ENSMUSG00000043183.19	ENSMUST00000150011.2	712	3	5759	1	5759	-1	3prime_fragment	FALSE	canonical	3	44	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54682508	54687785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54685050_54687516
ES.9263.22	chr13	+	2142	3	FSM	ENSMUSG00000043183.19	ENSMUST00000126506.2	840	3	-803	-499	-803	-5	multi-exon	FALSE	canonical	3	38	junction_1	4.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	5848	False	NA	12	True	AATAAA	-12	NA	54693792	54699098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54694947_54695067_54695153_54698195
ES.9263.3	chr13	+	4855	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	-36	0	-36	0	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651555	54699103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.4	chr13	+	4448	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	-29	400	-29	104	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGTGATATGCACTATAT	NA	False	NA	NA	False	NA	NA	NA	54651562	54698703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.5	chr13	+	4663	10	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.5683000199767	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651562	54699103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54676116_54676165_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.6	chr13	+	4441	10	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-9	102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.2897435622595	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGTGATATGCACTAT	NA	False	NA	NA	False	NA	NA	NA	54651582	54698701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54671782_54674486_54676116_54676365_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.7	chr13	+	3699	6	ISM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	-6	11281	-6	36	5prime_fragment	FALSE	canonical	3	26	junction_3	5.98665181883831	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTATCTAGGTTAGGAG	NA	False	NA	NA	False	NA	NA	NA	54651585	54687822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516
ES.9263.8	chr13	+	4654	9	NIC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	14.0928838425639	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651603	54699103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ES.9263.9	chr13	+	5068	12	NNC	ENSMUSG00000043183.19	novel	4819	10	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.7907952799816	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATCTTAGACTCCAGGG	NA	False	NA	12	True	AATAAA	-12	NA	54651605	54699098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54651818_54660125_54660286_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54695914_54696023_54698195
ES.9264.1	chr13	+	2941	1	Antisense	novelGene_ENSMUSG00000025871.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAATACTTG	NA	False	NA	NA	False	NA	NA	NA	54700463	54703404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_54700500_54703400
ES.9265.1	chr13	-	4404	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	110	-1787	0	1787	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCATATGCTCTTCAGA	NA	False	NA	NA	False	NA	NA	NA	54713138	54697243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.11	chr13	-	2551	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	-51	2	2	-2	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713167	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
ES.9265.12	chr13	-	2594	9	NNC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	174.783258637662	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713141	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709524_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.13	chr13	-	2247	6	NIC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	208.936736836776	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713169	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712327_54712435_54712994
ES.9265.14	chr13	-	2466	8	NIC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	-4	-2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	183.435803150724	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713173	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54711997_54712086_54712327_54712435_54712994
ES.9265.15	chr13	-	2029	10	NNC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.944493336681	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713148	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54699957_54700552_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712322_54712435_54712994
ES.9265.16	chr13	-	2223	6	NIC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	11	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	211.752308133819	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCCAGGTCTGTCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54713127	54699039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54712994
ES.9265.17	chr13	-	7551	6	NIC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	-2	-5	intron_retention	FALSE	canonical	3	524	junction_2	4.75815090134813	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGCCCAGGTCTGTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	54713159	54699040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54712435_54712994
ES.9265.18	chr13	-	2097	6	NNC	ENSMUSG00000025871.19	novel	659	4	NA	NA	-5	-622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.257667289927	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	54713162	54705021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54706450_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.2	chr13	-	2748	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	-19	-2	-19	2	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTCCATTCTGCC	NA	False	NA	NA	False	AATAAA	-28	NA	54713267	54699028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.5	chr13	-	5485	1	NIC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	8584	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54704520	54699035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54699000_54704500
ES.9265.6	chr13	-	4979	8	NIC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	1	0	intron_retention	FALSE	canonical	3	520	junction_6	5.2566769979926	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713137	54699035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.7	chr13	-	2784	10	NNC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	225.226305943353	342	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGTCTGTCTTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	54713162	54699036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54700631_54700710_54700851_54701010_54701118_54702822_54702972_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ES.9265.8	chr13	-	2138	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-21	-1171	2	-2	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713167	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
ES.9265.9	chr13	-	2108	5	NIC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	264.760623016339	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	54713137	54699037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54700631_54700710_54700851_54704339_54704465_54712327_54712435_54712994
ES.9266.1	chr13	+	178	1	Intergenic	novelGene_7550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAACA	NA	False	NA	NA	False	NA	NA	NA	54714616	54714794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54714600_54714800
ES.9267.1	chr13	+	1734	1	Intergenic	novelGene_7551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	66	False	NA	NA	False	NA	NA	NA	54718632	54720366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54718600_54720400
ES.9268.1	chr13	+	2693	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	-10	-1637	-10	1637	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAAGTGACTTTACTTG	2664	False	NA	10	True	AATAAA	-16	NA	54722817	54730578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ES.9268.2	chr13	+	2471	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	5	-1430	5	1430	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGTTGAAATTTTGTT	2679	False	NA	NA	False	ACTAAA	-25	NA	54722832	54730371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ES.9268.3	chr13	+	4250	4	NIC	ENSMUSG00000025870.11	novel	1046	4	NA	NA	13	1635	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.8623236946117	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGAAGTGACTTTACT	2687	False	NA	8	True	AATAAA	-14	NA	54722840	54730576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54723091_54723562_54723762_54726605_54726782_54726951
ES.9268.4	chr13	+	5501	3	NIC	ENSMUSG00000025870.11	novel	1046	4	NA	NA	-10	1633	intron_retention	FALSE	canonical	3	59	junction_2	16	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCTGAAGTGACTTTA	2696	False	NA	6	True	AATAAA	-12	NA	54722849	54730574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54723091_54723562_54726782_54728533
ES.9268.5	chr13	+	3901	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	201	-3056	169	3056	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCATAGGCAATGTAT	2875	False	NA	NA	False	AATAAA	-14	NA	54723028	54731997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ES.9268.6	chr13	+	2427	3	ISM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	733	-1642	701	1642	3prime_fragment	FALSE	canonical	3	59	junction_2	1	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACTTTACTTGAGGCT	3407	False	NA	15	True	AATAAA	-21	NA	54723560	54730583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54723762_54726605_54726782_54728533
ES.9269.1	chr13	+	5842	1	Genic_Genomic	ENSMUSG00000025868.7	novel	NA	NA	NA	NA	-4894	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTATTTCTTAATCTCA	1084	False	NA	19	True	AATAAA	-23	NA	54733125	54738967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_54733100_54739000
ES.9269.2	chr13	+	661	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	-15	2	-15	-2	multi-exon	FALSE	canonical	3	1416	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATTTCTTAATCTCATT	5963	False	NA	21	True	AATAAA	-25	NA	54738004	54738969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54738233_54738536
ES.9269.3	chr13	+	2157	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	42	-1551	42	1551	multi-exon	FALSE	canonical	3	1416	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGACACACAAATTATACA	6020	False	NA	NA	False	NA	NA	NA	54738061	54740522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54738233_54738536
ES.927.1	chr1	-	219	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTCCCTGCACAGCT	NA	False	NA	NA	False	NA	NA	NA	86641955	86641736	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86641700_86642000
ES.9270.1	chr13	-	6353	11	Fusion	ENSMUSG00000025869.12_ENSMUSG00000047547.15	novel	790	6	NA	NA	-10	4871	intron_retention	FALSE	canonical	0	0	junction_1	404.022387993537	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAGGCCAATAATGTC	7395	False	NA	NA	False	AATAAA	-23	NA	54759167	54727126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_54728153_54732349_54732534_54733116_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.11	chr13	-	4099	3	NIC	ENSMUSG00000025869.12	novel	1756	5	NA	NA	39	-301	intron_retention	FALSE	canonical	3	1006	junction_2	41	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGACTAGGTGGGTTT	NA	False	NA	-27	True	GATAAA	-18	NA	54737832	54732649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54736481_54737475_54737585_54737673
ES.9270.12	chr13	-	1075	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	21	660	-11	-309	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCATGTAACATGACTAG	NA	False	NA	-35	True	GATAAA	-10	NA	54737882	54732657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ES.9270.13	chr13	-	891	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	82	783	-32	271	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACTCTTTCAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	54737821	54732780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ES.9270.14	chr13	-	2290	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-38	-66	-38	66	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAAGAGTTGGAGT	7367	False	NA	85	True	NA	NA	NA	54759195	54740147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.15	chr13	-	2161	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-11	36	-11	-36	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATGGATACCAGTAT	7394	False	NA	-17	True	AATAAA	-5	NA	54759168	54740249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.16	chr13	-	1694	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-32	524	-32	-524	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTTGTCTCAATT	7373	False	NA	NA	False	NA	NA	NA	54759189	54740737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.17	chr13	-	1072	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	-38	1152	-38	-15	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTCAGCGCTCAGT	7367	False	NA	-3	True	NA	NA	NA	54759195	54741365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.19	chr13	-	5681	4	FSM	ENSMUSG00000047547.15	ENSMUST00000146301.2	3174	4	-53	-2454	-1	-1	multi-exon	FALSE	canonical	3	422	junction_3	20.3688214899363	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTAGTATCCTCATTT	7404	False	NA	-36	True	NA	NA	NA	54759158	54741398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.2	chr13	-	1037	1	Intergenic	novelGene_7552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGCTGGCAAATAAAT	NA	False	NA	NA	False	AATACA	-14	NA	54730938	54729901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54729900_54730900
ES.9270.20	chr13	-	1102	6	NNC	ENSMUSG00000047547.15	novel	1004	6	NA	NA	-14	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	220.936733025543	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTATTTATTAGTATCC	7443	False	NA	-42	True	NA	NA	NA	54759119	54741404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54741856_54743829_54743975_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.21	chr13	-	884	6	NNC	ENSMUSG00000047547.15	novel	2186	5	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	177.240627396768	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACACTTATTTATTAGTA	7405	False	NA	-45	True	NA	NA	NA	54759157	54741407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54741684_54741791_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ES.9270.22	chr13	-	4483	3	NNC	ENSMUSG00000047547.15	novel	3174	4	NA	NA	2765	-7814	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACTCTAACAGCTTGAG	9537	False	NA	NA	False	NA	NA	NA	54756340	54751666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54755410_54755495_54755749_54755853
ES.9270.23	chr13	-	3625	3	Genic_Genomic	ENSMUSG00000047547.15	novel	2186	5	NA	NA	-7	-11496	multi-exon	FALSE	non_canonical	0	0	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAAAACAACAACA	7398	False	NA	NA	False	NA	NA	NA	54759164	54755348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_54755410_54755495_54755749_54755853
ES.9270.3	chr13	-	2377	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	28	-649	-4	649	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCAGAAAACTTTTGG	NA	False	NA	NA	False	NA	NA	NA	54737875	54731348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ES.9270.4	chr13	-	1739	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	17	0	-15	0	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATGCACTTTTATTT	NA	False	NA	-3	True	NA	NA	NA	54737886	54731997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ES.9270.5	chr13	-	5307	3	NIC	ENSMUSG00000025869.12	novel	1756	5	NA	NA	19	-64	intron_retention	FALSE	canonical	3	1006	junction_2	15	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTGTATTGTATCTT	NA	False	NA	-67	True	NA	NA	NA	54737852	54732061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54733238_54733632_54737585_54737673
ES.9270.6	chr13	-	1181	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	16	559	-16	-208	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTTTACTGTGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	54737887	54732556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ES.9270.7	chr13	-	1185	5	NNC	ENSMUSG00000025869.12	novel	1756	5	NA	NA	10	-214	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	445.866291616668	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATATTTTTGTGTTTAC	NA	False	NA	-7	True	ATTAAA	-11	NA	54737861	54732562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54733238_54733632_54733740_54736410_54736517_54737475_54737585_54737673
ES.9270.9	chr13	-	1479	4	NIC	ENSMUSG00000025869.12	novel	1756	5	NA	NA	-11	-300	intron_retention	FALSE	canonical	3	1006	junction_3	34.2150064542836	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGACTAGGTGGGTTTT	NA	False	NA	-26	True	GATAAA	-19	NA	54737882	54732648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54733740_54736410_54736481_54737475_54737585_54737673
ES.9271.1	chr13	+	5141	11	NNC	ENSMUSG00000025873.17	novel	560	6	NA	NA	-10380	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.057145472808	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54759216	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54760207_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799911_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.11	chr13	+	1784	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-36	0	4	0	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAGGCTGACTTA	NA	False	NA	1	True	NA	NA	NA	54769600	54809399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.13	chr13	+	2026	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	110	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGCATCCTTTGCCAC	NA	False	NA	22	True	AATAAA	-15	NA	54769600	54809509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.14	chr13	+	1901	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-36	-117	4	117	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTTGCCACTGTTCCT	NA	False	NA	29	True	AATAAA	-22	NA	54769600	54809516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.15	chr13	+	4246	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	179.565387519593	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769600	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.17	chr13	+	4238	11	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	8	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	207.638363507325	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTATAAAACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	54769604	54811864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.18	chr13	+	3628	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-4	4	intron_retention	FALSE	canonical	0	0	junction_3	136.821051011897	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCTGACTTAGGTG	NA	False	NA	5	True	NA	NA	NA	54769609	54809403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.19	chr13	+	5945	9	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	-12	intron_retention	FALSE	canonical	0	0	junction_3	180.489568604393	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTATAAAACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	54769614	54811864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.2	chr13	+	4368	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	-41	-5	-41	5	multi-exon	TRUE	canonical	0	0	junction_3	132.701770900015	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769555	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.20	chr13	+	4327	12	NIC	ENSMUSG00000025873.17	novel	1748	11	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	168.089507836236	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769614	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.21	chr13	+	3374	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	139.87966609788	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAGGCTGACTTA	NA	False	NA	1	True	NA	NA	NA	54769614	54809399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.22	chr13	+	1873	11	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	110	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	207.638363507325	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGCATCCTTTGCCAC	NA	False	NA	22	True	AATAAA	-15	NA	54769614	54809509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.23	chr13	+	1805	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-1	118	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTGCCACTGTTCCTC	NA	False	NA	30	True	AATAAA	-23	NA	54769615	54809517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.24	chr13	+	3963	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	20	339	0	-339	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACTGATGAGTTATTAT	NA	False	NA	NA	False	AATAGA	-19	NA	54769616	54811537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.25	chr13	+	1832	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	175.213041752034	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTAGGTGTATTTTTTT	NA	False	NA	14	True	NA	NA	NA	54769616	54809412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793129_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.26	chr13	+	4260	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	171.17990536275	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769616	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799894_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.27	chr13	+	5846	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_3	139.87966609788	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769616	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.28	chr13	+	3864	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	-512	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTCAGTCTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	54769617	54811364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.3	chr13	+	1816	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-33	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	139.859541533728	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGGTGTATTTTTTTCC	NA	False	NA	16	True	NA	NA	NA	54769563	54809414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.30	chr13	+	4144	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	4	-13	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	203.833507464872	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATTATAAAACC	NA	False	NA	NA	False	ATTAAA	-9	NA	54769620	54811863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.31	chr13	+	1147	1	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	6	-18584	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGACAACTTTGT	NA	False	NA	NA	False	NA	NA	NA	54769622	54770769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769600_54770800
ES.9271.32	chr13	+	4096	10	NIC	ENSMUSG00000025873.17	novel	1748	11	NA	NA	7	-3	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	145.409086611311	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769623	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.33	chr13	+	1944	13	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	9	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	200.327786944853	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTGACTTAGGTGTAT	NA	False	NA	8	True	NA	NA	NA	54769625	54809406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54777202_54777278_54778847_54778894_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.34	chr13	+	1682	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	9	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCTGACTTAGGTGT	NA	False	NA	6	True	NA	NA	NA	54769625	54809404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.35	chr13	+	4213	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	139.859541533728	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769625	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.36	chr13	+	1688	12	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	9	135	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	167.574875333312	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCAGGTGGTCCCAGAG	NA	False	NA	47	True	AATAAA	-40	NA	54769625	54809534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766_54808997_54809259
ES.9271.37	chr13	+	1547	9	NIC	ENSMUSG00000025873.17	novel	1748	11	NA	NA	-10	5	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	146.094522056783	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCTGACTTAGGTGT	NA	False	NA	6	True	NA	NA	NA	54769626	54809404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789310_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.38	chr13	+	4270	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.958874450256	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATTATAAAACC	NA	False	NA	NA	False	ATTAAA	-9	NA	54769626	54811863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804103_54804239_54808766
ES.9271.39	chr13	+	1751	11	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	207.638363507325	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAGGCTGACTTA	NA	False	NA	1	True	NA	NA	NA	54769626	54809399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.4	chr13	+	3523	9	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-21	4	intron_retention	FALSE	canonical	0	0	junction_3	180.489568604393	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGGCTGACTTAGGTG	NA	False	NA	5	True	NA	NA	NA	54769575	54809403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.40	chr13	+	1819	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-10	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	132.701770900015	432	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGGCTGACTTAGGTGT	NA	False	NA	6	True	NA	NA	NA	54769626	54809404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789366_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.42	chr13	+	4020	9	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-9	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	204.502444973159	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769627	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.44	chr13	+	6769	8	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-6	118	intron_retention	FALSE	non_canonical	0	0	junction_3	190.334935718859	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTGCCACTGTTCCTC	NA	False	NA	30	True	AATAAA	-23	NA	54769630	54809517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789369_54793057_54793135_54797790_54797877_54797971_54803391_54804094_54804239_54808766
ES.9271.45	chr13	+	4355	12	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	193.741200813255	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769632	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54795687_54795760_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.46	chr13	+	4343	13	NNC	ENSMUSG00000025873.17	novel	1748	11	NA	NA	-4	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	195.752962231028	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTATAAAACCA	NA	False	NA	NA	False	ATTAAA	-10	NA	54769632	54811864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54777202_54777278_54786062_54786132_54788718_54788770_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.47	chr13	+	4360	12	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	-4	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	192.665556156064	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769632	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54774608_54774678_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.49	chr13	+	4062	9	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	148.342298418219	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAAACCAGCTGTGGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	54769637	54811873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.5	chr13	+	4272	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-42	-2482	-2	5	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769594	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.50	chr13	+	1894	11	NNC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	110	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.958874450256	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGCATCCTTTGCCAC	NA	False	NA	22	True	AATAAA	-15	NA	54769648	54809509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804103_54804239_54808766
ES.9271.51	chr13	+	229	1	Intergenic	novelGene_7555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGTTGGAATTACT	NA	False	NA	NA	False	AAGAAA	-41	NA	54779375	54779604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54779400_54779600
ES.9271.52	chr13	+	103	1	Intergenic	novelGene_7557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAAATAAGTAA	218	False	NA	NA	False	NA	NA	NA	54784400	54784503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54784400_54784500
ES.9271.53	chr13	+	4697	3	ISM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	32338	13	2681	-13	3prime_fragment	FALSE	canonical	3	423	junction_1	41	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAATTATAAAACC	NA	False	NA	NA	False	ATTAAA	-9	NA	54801934	54811863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54803391_54804094_54804239_54808766
ES.9271.6	chr13	+	1954	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	1	2367	1	110	multi-exon	FALSE	canonical	0	0	junction_3	132.701770900015	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGCATCCTTTGCCAC	NA	False	NA	22	True	AATAAA	-15	NA	54769597	54809509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.8	chr13	+	4401	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	1	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769597	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9271.9	chr13	+	4185	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	3	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGGGTCTTTCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	54769599	54811881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ES.9272.1	chr13	-	155	1	Intergenic	novelGene_7553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTGTGGACTTC	2373	False	NA	NA	False	NA	NA	NA	54764189	54764034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54764000_54764200
ES.9273.1	chr13	-	207	1	Intergenic	novelGene_7554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACTATCTCTTACACT	NA	False	NA	NA	False	AAAAAG	-5	NA	54775669	54775462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54775500_54775700
ES.9274.1	chr13	-	202	1	Intergenic	novelGene_7556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATGAATACTAGGGGCA	NA	False	NA	NA	False	NA	NA	NA	54779981	54779779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54779800_54780000
ES.9275.1	chr13	-	178	1	Intergenic	novelGene_7558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGACTG	NA	False	NA	NA	False	NA	NA	NA	54808356	54808178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54808200_54808400
ES.9276.1	chr13	-	173	1	Intergenic	novelGene_7559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTTTCGAGACAGG	NA	False	NA	-1	True	NA	NA	NA	54822383	54822210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54822200_54822400
ES.9277.1	chr13	-	133	1	Intergenic	novelGene_7560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	54822684	54822551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54822600_54822700
ES.9278.103	chr13	-	7783	7	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	257	junction_5	169.04207234361	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54836002	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773
ES.9278.104	chr13	-	2311	7	NNC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	291.387151779591	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835534	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828519_54830597_54830764_54830855_54831030_54831407_54831576_54831773_54831903_54832150_54832302_54835306
ES.9278.105	chr13	-	7699	7	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	635	junction_3	37.3128664136113	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835635	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773
ES.9278.107	chr13	-	4211	9	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-60	-1	intron_retention	FALSE	canonical	3	234	junction_8	199.308805625843	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835527	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54832302_54835306
ES.9278.108	chr13	-	6939	10	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	59	-1	intron_retention	FALSE	canonical	3	163	junction_9	185.087967073917	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835562	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150
ES.9278.109	chr13	-	3728	11	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	215.512064627482	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54841658	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831413_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.11	chr13	-	4228	9	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	26	0	intron_retention	FALSE	canonical	3	393	junction_7	119.588813753628	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841694	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54832302_54841541
ES.9278.112	chr13	-	3780	11	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	247.622616091503	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCCAAGCTGCCT	NA	False	NA	-18	True	AATAAA	-15	NA	54836087	54827224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54835984
ES.9278.114	chr13	-	3912	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	45	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	236.882164799294	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCCAAGCTGCCT	NA	False	NA	-18	True	AATAAA	-15	NA	54835576	54827224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831381_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.116	chr13	-	7962	5	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-23	-2	intron_retention	FALSE	canonical	3	257	junction_3	204.285339659996	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCCAAGCTGCCT	NA	False	NA	-18	True	AATAAA	-15	NA	54835930	54827224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54831033_54831407_54831576_54831773
ES.9278.117	chr13	-	3776	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	251.674174280954	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCCAAGCTGCCT	NA	False	NA	-18	True	AATAAA	-15	NA	54835034	54827224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54834935
ES.9278.120	chr13	-	3957	9	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	28	1	intron_retention	FALSE	canonical	3	63	junction_7	245.446500025973	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCTGCCCAAGCTGCC	NA	False	NA	-19	True	AATAAA	-14	NA	54835439	54827225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54831903_54832150_54832302_54835306
ES.9278.124	chr13	-	3330	4	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	981	1	intron_retention	FALSE	canonical	3	635	junction_2	30.8796948747159	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCTGCCCAAGCTGCC	NA	False	NA	-19	True	AATAAA	-14	NA	54830904	54827225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54830048_54830139_54830228_54830392_54830764_54830855
ES.9278.126	chr13	-	3708	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-61	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	244.333308069323	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCTGCCCAAGCTGCC	NA	False	NA	-19	True	AATAAA	-14	NA	54835528	54827225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54832150_54832302_54835306
ES.9278.127	chr13	-	3770	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	237.119400302885	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCTGCCCAAGCTGCC	NA	False	NA	-19	True	AATAAA	-14	NA	54835467	54827225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831413_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.128	chr13	-	3748	12	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-102	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	261.315837526448	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGCTGCCCAAGCTGCC	NA	False	NA	-19	True	AATAAA	-14	NA	54841822	54827225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54841541_54841651_54841784
ES.9278.130	chr13	-	4174	7	NIC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	63	junction_6	231.057472407961	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGCTGCCCAAGCTGC	NA	False	NA	-20	True	AATAAA	-13	NA	54832206	54827226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831903_54832150
ES.9278.131	chr13	-	3740	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	215.512064627482	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGCTGCCCAAGCTGC	NA	False	NA	-20	True	AATAAA	-13	NA	54841644	54827226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831381_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.132	chr13	-	4087	9	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-16	0	intron_retention	FALSE	canonical	3	393	junction_6	126.958100864025	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGCTGCCCAAGCTGC	NA	False	NA	-20	True	AATAAA	-13	NA	54841679	54827226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54841541
ES.9278.133	chr13	-	4431	8	NIC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	-41	-1	intron_retention	FALSE	canonical	3	111	junction_7	208.855286292315	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAGTGCTGCCCAAGCTG	NA	False	NA	-21	True	AATAAA	-12	NA	54835948	54827227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831576_54831773_54832302_54835843
ES.9278.134	chr13	-	3908	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-15	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	222.336344307448	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAGTGCTGCCCAAGCTG	NA	False	NA	-21	True	AATAAA	-12	NA	54841678	54827227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829449_54829538_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54841541
ES.9278.137	chr13	-	3569	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	16	-79	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	224.471725514719	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGTAGTGCAATCATTA	NA	False	NA	-28	True	AATGAA	-19	NA	54841704	54827305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54832150_54832302_54841541
ES.9278.139	chr13	-	4709	7	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-539	-81	intron_retention	FALSE	canonical	3	635	junction_4	37.7921949613938	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAAGTAGTGCAATCAT	NA	False	NA	-30	True	AATGAA	-17	NA	54832759	54827307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54831576_54831773
ES.9278.140	chr13	-	4148	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	-303	96	-17	-81	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAAGTAGTGCAATCAT	NA	False	NA	-30	True	AATGAA	-17	NA	54835924	54827307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.141	chr13	-	3596	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	1	137	0	-133	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTTAACAGATTTGTA	NA	False	NA	-82	True	NA	NA	NA	54841659	54827359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.142	chr13	-	3573	11	FSM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	483	236	43	-223	multi-exon	FALSE	canonical	3	163	junction_9	222.59883198256	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTTTTTTCCATCCC	NA	False	NA	3	True	AATATA	-29	NA	54835424	54827449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835306
ES.9278.144	chr13	-	3380	12	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-1	-226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	225.905377690354	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGGTTTTTTCCAT	NA	False	NA	0	True	AATATA	-26	NA	54841664	54827452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828274_54828404_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.147	chr13	-	3601	11	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	26	-230	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	200.392015809014	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAATGTGTGGTTTTTT	NA	False	NA	-4	True	AATATA	-22	NA	54841694	54827456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.148	chr13	-	3541	11	FSM	ENSMUSG00000034928.17	ENSMUST00000150806.8	3772	11	1	230	1	-230	multi-exon	FALSE	canonical	3	111	junction_10	208.151603404826	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAATGTGTGGTTTTTT	NA	False	NA	-4	True	AATATA	-22	NA	54836000	54827456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.149	chr13	-	7542	7	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-17	-231	intron_retention	FALSE	canonical	3	257	junction_6	162.807060316464	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAATGTGTGGTTTTT	NA	False	NA	-5	True	AATATA	-21	NA	54835924	54827457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831033_54831407
ES.9278.15	chr13	-	3663	11	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_7	214.700163018103	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841678	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54830930_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.150	chr13	-	3502	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	15	-233	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	219.199087589342	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTAAATGTGTGGTTT	NA	False	NA	-7	True	AATATA	-19	NA	54841644	54827459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832323_54841541
ES.9278.151	chr13	-	3447	11	NIC	ENSMUSG00000034928.17	novel	1689	11	NA	NA	-16	-233	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	252.395800282017	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTAAATGTGTGGTTT	NA	False	NA	-7	True	AATATA	-19	NA	54835923	54827459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835843
ES.9278.153	chr13	-	3841	10	NIC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	-24	-236	intron_retention	FALSE	canonical	3	111	junction_9	188.600760638923	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGCTTAAATGTGTGG	NA	False	NA	-10	True	AATATA	-16	NA	54835931	54827462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.154	chr13	-	3511	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	-18	241	-15	-237	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCTTAAATGTGTG	NA	False	NA	-11	True	AATATA	-15	NA	54841678	54827463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.156	chr13	-	3261	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	102	578	-52	-563	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTTGTGATTTGCCGA	NA	False	NA	NA	False	AAAAAG	-21	NA	54835519	54827789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.157	chr13	-	3343	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	4	-568	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	233.351258835259	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGGATGTTTGTGATTT	NA	False	NA	NA	False	AAAAAG	-16	NA	54835617	54827794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835306
ES.9278.159	chr13	-	3012	12	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	16	-570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.65542687294	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGGATGTTTGTGAT	NA	False	NA	NA	False	AAAAAG	-14	NA	54841643	54827796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828274_54828404_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.161	chr13	-	3181	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	-21	574	-18	-570	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGGATGTTTGTGAT	NA	False	NA	NA	False	AAAAAG	-14	NA	54841681	54827796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.162	chr13	-	3448	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	26	-570	intron_retention	FALSE	canonical	3	257	junction_7	154.091202751592	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAGGATGTTTGTGAT	NA	False	NA	NA	False	AAAAAG	-14	NA	54841694	54827796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54832302_54841541
ES.9278.163	chr13	-	3220	11	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	2	-571	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	182.191547553667	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTAGGATGTTTGTGA	NA	False	NA	NA	False	AAAAAG	-13	NA	54841657	54827797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.18	chr13	-	4200	11	NNC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-635	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	227.305433283061	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54842355	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841784
ES.9278.2	chr13	-	3809	11	FSM	ENSMUSG00000034928.17	ENSMUST00000128257.8	1689	11	51	-2171	-8	5	multi-exon	FALSE	canonical	3	111	junction_10	190.55762907845	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGCTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-33	NA	54836021	54827206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.21	chr13	-	4677	7	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	442	junction_6	95.4515583948214	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841678	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54832302_54841541
ES.9278.23	chr13	-	3949	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	233.351258835259	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835640	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835306
ES.9278.24	chr13	-	3893	11	NIC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_10	242.423369335549	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836043	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835843
ES.9278.25	chr13	-	4023	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	207.732520323612	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835639	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54835306
ES.9278.26	chr13	-	7499	9	ISM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	-302	0	-16	0	intron_retention	FALSE	canonical	3	393	junction_7	105.786858233904	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835923	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773
ES.9278.28	chr13	-	3757	7	NNC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-83	0	intron_retention	FALSE	canonical	0	0	junction_4	259.860860205354	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54831968	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830708_54830764_54830855_54831030_54831407
ES.9278.3	chr13	-	4328	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	-382	-5	-2	5	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGCTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-33	NA	54836003	54827206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.30	chr13	-	4025	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	163	junction_8	182.498367995409	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841678	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831964_54832150_54832302_54841541
ES.9278.32	chr13	-	3748	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_9	218.748462851742	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841694	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831869_54832150_54832302_54841541
ES.9278.34	chr13	-	3917	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-15	0	intron_retention	FALSE	canonical	3	163	junction_8	207.808019189602	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841678	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.36	chr13	-	3739	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	268.505958965532	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836108	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835984
ES.9278.37	chr13	-	4089	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-98	0	intron_retention	FALSE	canonical	3	163	junction_8	189.111241676414	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841818	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.38	chr13	-	3775	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_9	252.395800282017	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836003	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835843
ES.9278.39	chr13	-	4303	9	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-17	0	intron_retention	FALSE	canonical	3	442	junction_8	95.2771450821234	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841642	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831900_54832150_54832302_54841541
ES.9278.4	chr13	-	4248	9	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	0	4	intron_retention	FALSE	canonical	3	442	junction_8	102.95630140987	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTGCTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-32	NA	54841659	54827207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.40	chr13	-	4672	8	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	20	0	intron_retention	FALSE	canonical	3	234	junction_7	166.513834689065	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835601	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773_54832302_54835306
ES.9278.41	chr13	-	4381	8	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-20	0	intron_retention	FALSE	canonical	3	234	junction_7	201.417020945427	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835487	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54832302_54835306
ES.9278.42	chr13	-	3580	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_7	211.190174960863	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54841636	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54830889_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.44	chr13	-	3114	12	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	276.748924012631	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841704	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828011_54828771_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831985_54832150_54832302_54841541
ES.9278.45	chr13	-	4598	8	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	234	junction_7	160.42774455963	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835453	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54832302_54835306
ES.9278.47	chr13	-	3864	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	26	0	intron_retention	FALSE	canonical	3	393	junction_6	125.137060659971	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841694	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.48	chr13	-	4060	10	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	33	0	intron_retention	FALSE	canonical	3	163	junction_8	230.247907190124	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835588	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835306
ES.9278.5	chr13	-	3802	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	-53	-15	7	4	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTGCTCTCTGTGT	NA	False	NA	-1	True	AATAAA	-32	NA	54841713	54827207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.50	chr13	-	4040	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	17	0	intron_retention	FALSE	canonical	3	257	junction_7	154.091202751592	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841703	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54832302_54841541
ES.9278.51	chr13	-	3757	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	219.702162028506	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841691	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830503_54830606_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.53	chr13	-	4167	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	14	0	intron_retention	FALSE	canonical	3	442	junction_9	97.8388698035931	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841706	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.54	chr13	-	7329	10	ISM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	-385	2	-5	0	intron_retention	FALSE	canonical	3	393	junction_7	109.801279535597	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54836006	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150
ES.9278.56	chr13	-	1682	4	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	226.954229355221	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841658	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828550_54831821_54831900_54832150_54832302_54841541
ES.9278.57	chr13	-	3767	11	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	213.414994787152	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54836127	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835984
ES.9278.58	chr13	-	4056	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	5	0	intron_retention	FALSE	canonical	3	234	junction_9	167.228386744994	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835616	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ES.9278.59	chr13	-	3677	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	277.466124058415	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841845	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831889_54832150_54832302_54841784
ES.9278.6	chr13	-	2631	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	249.346044684892	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGGCTGCTCTCTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	54841657	54827208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828447_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.60	chr13	-	3610	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	218.506773350393	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841692	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830668_54830924_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.61	chr13	-	3690	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	219.702162028506	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841714	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830708_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.62	chr13	-	3765	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	233.046433141552	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835037	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54834899
ES.9278.65	chr13	-	3762	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	-138	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_10	246.356733214256	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841858	54827213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841784
ES.9278.67	chr13	-	4149	9	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	26	-1	intron_retention	FALSE	canonical	3	393	junction_6	126.905476635171	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54841694	54827214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54841541
ES.9278.68	chr13	-	3787	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	248.091132449348	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54841650	54827214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830755_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.69	chr13	-	3620	11	NNC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	255.624353299915	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54835940	54827214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54830930_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.71	chr13	-	3639	12	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	225.905377690354	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGCCTCTGGCTGCTC	NA	False	NA	-8	True	AATAAA	-25	NA	54841644	54827214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829449_54829538_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.73	chr13	-	3881	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-15	-2	intron_retention	FALSE	canonical	3	393	junction_6	125.07814841081	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTGCCTCTGGCTGCT	NA	False	NA	-9	True	AATAAA	-24	NA	54841678	54827215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.74	chr13	-	4853	5	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	15	-2	intron_retention	FALSE	canonical	3	442	junction_4	110.205206319847	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTGCCTCTGGCTGCT	NA	False	NA	-9	True	AATAAA	-24	NA	54841644	54827215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830228_54830392_54830764_54830855_54832302_54841541
ES.9278.76	chr13	-	4155	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	33	-2	intron_retention	FALSE	canonical	3	234	junction_9	166.725619203425	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTGCCTCTGGCTGCT	NA	False	NA	-9	True	AATAAA	-24	NA	54835588	54827215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54835306
ES.9278.77	chr13	-	3898	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-11	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	222.336344307448	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTGCCTCTGGCTGCT	NA	False	NA	-9	True	AATAAA	-24	NA	54841636	54827215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832053_54832122_54832302_54841541
ES.9278.78	chr13	-	3707	11	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_7	208.231025546147	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCTGCCTCTGGCTGC	NA	False	NA	-10	True	AATAAA	-23	NA	54841636	54827216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831021_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.79	chr13	-	3955	10	NNC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-147	-3	intron_retention	FALSE	canonical	3	28	junction_9	222.00800786358	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGCTGCCTCTGGCTGC	NA	False	NA	-10	True	AATAAA	-23	NA	54841867	54827216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54841784
ES.9278.8	chr13	-	3929	11	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-58	2	combination_of_known_junctions	FALSE	canonical	3	163	junction_9	182.191547553667	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGGCTGCTCTCTGT	NA	False	NA	-3	True	AATAAA	-30	NA	54841778	54827209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54841541
ES.9278.81	chr13	-	3910	10	NIC	ENSMUSG00000034928.17	novel	3772	11	NA	NA	5	-4	intron_retention	FALSE	canonical	3	111	junction_9	216.172142196279	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAAGCTGCCTCTGGCTG	NA	False	NA	-11	True	AATAAA	-22	NA	54836008	54827217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.83	chr13	-	3646	12	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	212.65542687294	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCCAAGCTGCCTCTG	NA	False	NA	-15	True	AATAAA	-18	NA	54841658	54827221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829105_54829191_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.85	chr13	-	3976	9	NNC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-102	0	intron_retention	FALSE	canonical	3	28	junction_8	238.634625264231	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841822	54827222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831900_54832150_54832302_54841784
ES.9278.86	chr13	-	3579	12	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	212.65542687294	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841636	54827222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54828274_54828404_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.88	chr13	-	3962	10	NNC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	59	0	intron_retention	FALSE	canonical	0	0	junction_9	228.181917895176	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54835562	54827222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835302
ES.9278.89	chr13	-	3861	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	40	junction_8	241.872836705163	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54835476	54827222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54835306
ES.9278.9	chr13	-	3882	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	111	junction_9	198.230007320963	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54836012	54827211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ES.9278.90	chr13	-	3843	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	40	junction_8	220.407254927535	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841658	54827222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831889_54832150_54832302_54841541
ES.9278.92	chr13	-	3824	11	NNC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	262.685439261486	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835042	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54834899
ES.9278.94	chr13	-	3843	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	-15	-1	intron_retention	FALSE	canonical	3	393	junction_6	123.920025982511	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54841678	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829625_54829746_54829847_54829925_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ES.9278.97	chr13	-	6958	9	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	-53	-1	intron_retention	FALSE	canonical	3	257	junction_6	153.902109715884	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835520	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150
ES.9278.98	chr13	-	4150	12	NNC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	-22	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	270.24778957208	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCCCAAGCTGCCTC	NA	False	NA	-17	True	AATAAA	-16	NA	54835929	54827223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54829449_54829538_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831903_54832150_54832302_54835306
ES.9279.1	chr13	-	175	1	Intergenic	novelGene_7561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTGAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54859802	54859627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54859600_54859800
ES.928.1	chr1	-	5736	1	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCTGCTAATCCCAATG	NA	False	NA	NA	False	NA	NA	NA	86800825	86795089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86795100_86800800
ES.9280.1	chr13	+	4031	29	NNC	ENSMUSG00000034918.9	novel	4129	32	NA	NA	12362	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.557874976850475	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGAGTTGGGGAAAGG	NA	False	NA	NA	False	AATATA	-26	NA	54861635	54884474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54861869_54861997_54862052_54863438_54863526_54864775_54864866_54865422_54865549_54865624_54865772_54865865_54865942_54866045_54866162_54866255_54866490_54867276_54867433_54867521_54867684_54867940_54868003_54868559_54868858_54871955_54872196_54873705_54873773_54874054_54874661_54875722_54875795_54876290_54876341_54878849_54878999_54879156_54879266_54881049_54881139_54881481_54881551_54881638_54881717_54881815_54881877_54881959_54882085_54882488_54882603_54882682_54882761_54883091_54883150_54884249
ES.9280.2	chr13	+	1050	9	ISM	ENSMUSG00000034918.9	ENSMUST00000037145.8	4129	32	31623	1	31623	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	0.330718913883074	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGAGTTGGGGAAAGG	4724	False	NA	NA	False	AATATA	-26	NA	54880896	54884474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54881139_54881481_54881551_54881638_54881717_54881815_54881877_54881959_54882085_54882488_54882603_54882682_54882761_54883091_54883150_54884249
ES.9281.1	chr13	-	1326	6	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	-48	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.6497480396026	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCCTAGGCAGGACTGGG	NA	False	NA	5	True	AATAAA	-22	NA	54914353	54906666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913351_54913506_54914117
ES.9281.2	chr13	-	1365	7	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.1125454566687	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCGCCGCCTAGGCAG	NA	False	NA	-2	True	AATAAA	-15	NA	54914347	54906673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54913727_54913804_54914117
ES.9281.3	chr13	-	1358	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	-8	1	-8	-1	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGCGCCGCCTAGGCAG	NA	False	NA	-2	True	AATAAA	-15	NA	54914416	54906673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
ES.9281.5	chr13	-	1043	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	47	261	47	260	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGTTCTTCAATGGG	NA	False	NA	NA	False	TTTAAA	-36	NA	54914361	54906933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
ES.9282.1	chr13	+	150	1	Intergenic	novelGene_7562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	3602	False	NA	NA	False	NA	NA	NA	54916851	54917001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54916900_54917000
ES.9283.1	chr13	+	1578	3	ISM	ENSMUSG00000074895.11	ENSMUST00000110003.9	2131	6	2451	-2	2444	2	3prime_fragment	FALSE	canonical	1	2	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACTTGGAATCTAAAT	NA	False	NA	NA	False	AATAAA	-10	NA	54934276	54936266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54934546_54934661_54934802_54935097
ES.9284.1	chr13	+	1635	7	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-21	0	intron_retention	FALSE	canonical	1	1	junction_6	148.077307136809	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937168	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54943272_54943778_54943896_54943969_54944032_54944534
ES.9284.10	chr13	+	3200	7	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	352	junction_3	19.4479361944198	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937253	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.11	chr13	+	1901	6	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	379	junction_1	14.5106857177736	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937253	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.12	chr13	+	1505	8	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_7	138.816866586808	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937253	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943888_54943969
ES.9284.13	chr13	+	2633	4	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-21	0	intron_retention	FALSE	canonical	3	379	junction_1	16.9771087709958	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937254	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865
ES.9284.14	chr13	+	1008	9	FSM	ENSMUSG00000025875.15	ENSMUST00000131692.9	1048	9	40	0	-20	0	multi-exon	FALSE	canonical	1	1	junction_8	130.695674660641	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937255	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944534
ES.9284.15	chr13	+	1814	7	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	379	junction_1	14.3488288333539	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937260	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.16	chr13	+	1567	8	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_1	139.301171303513	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937261	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937557_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.18	chr13	+	3806	9	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	152.501588106485	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937277	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54940191_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
ES.9284.19	chr13	+	759	6	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	154.932243254915	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937277	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942968_54944510
ES.9284.2	chr13	+	2123	6	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	379	junction_1	15.1340675299141	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937183	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54943272_54943778_54943896_54943969
ES.9284.20	chr13	+	1329	7	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	7	0	intron_retention	FALSE	canonical	2	5	junction_2	148.099534848095	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937282	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937495_54940421_54940465_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.22	chr13	+	1584	8	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_3	140.019240660354	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937284	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937495_54940421_54940473_54940552_54940802_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.23	chr13	+	3709	5	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	379	junction_1	11.9660979437743	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937284	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54943272_54943778_54943896_54943969
ES.9284.24	chr13	+	4055	4	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	12	0	intron_retention	FALSE	canonical	3	379	junction_1	11.8977121983832	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937287	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54942992_54943223
ES.9284.25	chr13	+	1021	9	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	140.302741865582	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937315	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937444_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
ES.9284.26	chr13	+	2338	5	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	42	0	intron_retention	FALSE	canonical	3	379	junction_1	15.6923548264752	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937317	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223
ES.9284.27	chr13	+	3177	6	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	45	0	intron_retention	FALSE	canonical	1	1	junction_5	156.466482033693	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937320	54944588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54943272_54943778_54943896_54943969_54944032_54944534
ES.9284.28	chr13	+	3562	6	NIC	ENSMUSG00000025875.15	novel	718	7	NA	NA	684	-2	intron_retention	FALSE	canonical	3	33	junction_2	168.344171268268	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGTTTATGTTCAC	NA	False	NA	15	True	AATAAA	-16	NA	54938141	54944586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969_54944032_54944410
ES.9284.29	chr13	+	1354	7	ISM	ENSMUSG00000025875.15	ENSMUST00000131692.9	1048	9	3123	1	-214	-1	intron_retention	FALSE	canonical	3	352	junction_2	21.9348783650352	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACAGTGGTGGTTTAT	NA	False	NA	9	True	AATAAA	-10	NA	54940338	54944580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.3	chr13	+	1579	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	-2	8	-2	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937187	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.30	chr13	+	1218	6	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-194	0	intron_retention	FALSE	canonical	3	15	junction_5	151.974471540453	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54940358	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969
ES.9284.31	chr13	+	1267	6	ISM	ENSMUSG00000025875.15	ENSMUST00000145574.2	718	7	-176	6	-45	1	intron_retention	FALSE	canonical	3	352	junction_1	23.7200337267888	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTGGTGGTTTATGT	NA	False	NA	11	True	AATAAA	-12	NA	54940507	54944582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ES.9284.32	chr13	+	1083	2	ISM	ENSMUSG00000025875.15	ENSMUST00000139574.2	425	4	-205	0	-205	0	intron_retention	FALSE	canonical	3	411	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54942991	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_54943272_54943778
ES.9284.4	chr13	+	1362	6	NNC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-12	0	intron_retention	FALSE	canonical	2	3	junction_4	195.53454937683	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937203	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_54937495_54941007_54941179_54942865_54942992_54943223_54943272_54943781_54943896_54943969
ES.9284.6	chr13	+	1170	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937217	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
ES.9284.7	chr13	+	1430	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	2	-2	intron_retention	FALSE	canonical	3	15	junction_6	140.730731856581	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAACAGTGGTGGTTTA	NA	False	NA	8	True	AATAAA	-9	NA	54937217	54944579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969
ES.9284.8	chr13	+	1029	8	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	26	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_6	152.8088041058	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937241	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943969_54944032_54944410
ES.9284.9	chr13	+	3508	6	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	-22	0	intron_retention	FALSE	canonical	3	379	junction_1	12.419339757008	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	False	NA	10	True	AATAAA	-11	NA	54937253	54944581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_54937495_54940421_54940473_54940552_54942992_54943223_54943272_54943778_54943896_54943969
ES.9285.1	chr13	-	175	1	Intergenic	novelGene_7563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	54963371	54963196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_54963200_54963400
ES.9286.1	chr13	+	3453	3	Intergenic	novelGene_7564	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAAAATATCTAAT	NA	False	NA	NA	False	NA	NA	NA	54969164	54978413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_54969309_54970341_54970417_54975179
ES.9287.1	chr13	-	173	1	Intergenic	novelGene_7565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTCCT	1868	False	NA	NA	False	NA	NA	NA	55005055	55004882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55004900_55005100
ES.9288.1	chr13	-	4030	4	Intergenic	novelGene_7566	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGACAGACTTGTGGGG	207	False	NA	NA	False	NA	NA	NA	55022570	55015399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55019193_55020811_55020920_55021941_55021985_55022484
ES.9288.2	chr13	-	2237	3	Intergenic	novelGene_7567	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGTTGTTGTCGCATTA	642	False	NA	NA	False	NA	NA	NA	55022135	55017257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55019193_55020811_55020920_55021941
ES.9289.1	chr13	-	2526	1	Intergenic	novelGene_7568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGCAAGATGTTTGG	NA	False	NA	NA	False	ATTAAA	-11	NA	55047980	55045454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55045500_55048000
ES.929.1	chr1	-	640	2	Genic_Genomic	ENSMUSG00000084106.5	novel	891	1	NA	NA	-19	32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAACAACAAAAAAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	86837424	86836482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_86837082_86837383
ES.9290.1	chr13	+	3862	15	FSM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	-35	0	-35	0	multi-exon	TRUE	canonical	1	4	junction_1	2.26778683805536	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGTGTCGCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55097188	55153831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
ES.9290.3	chr13	+	3999	16	FSM	ENSMUSG00000025876.16	ENSMUST00000026994.14	3995	16	-6	2	-6	-2	multi-exon	FALSE	canonical	0	0	junction_5	3.46153466286591	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGGAGTGTCGCTTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	55097217	55153829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145005_55145174_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
ES.9290.4	chr13	+	3505	14	ISM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	41468	2	-5660	-2	3prime_fragment	FALSE	canonical	1	5	junction_1	2.05256370217328	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGGAGTGTCGCTTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	55138691	55153829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
ES.9291.1	chr13	+	186	1	Intergenic	novelGene_7569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGAAAAGAAAGAAAGAAA	7823	False	NA	NA	False	AATAAA	-6	NA	55198280	55198466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55198300_55198500
ES.9292.1	chr13	+	4078	1	Intergenic	novelGene_7570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	55208211	55212289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55208200_55212300
ES.9293.1	chr13	+	175	1	Intergenic	novelGene_7571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACGAAAAAACA	5180	False	NA	NA	False	NA	NA	NA	55218260	55218435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55218300_55218400
ES.9294.1	chr13	+	176	2	Intergenic	novelGene_7573	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTCACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	55236729	55271982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55236809_55271885
ES.9294.10	chr13	+	3413	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-14	2	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGATGTGTGCGCTCT	5180	False	NA	13	True	NA	NA	NA	55253109	55282640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
ES.9294.11	chr13	+	3652	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-14	241	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	5180	False	NA	NA	False	AATAAA	-36	NA	55253109	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
ES.9294.12	chr13	+	3270	6	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_2	26.8134294710692	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	5180	False	NA	11	True	NA	NA	NA	55253109	55282638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.13	chr13	+	3401	6	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	0	241	intron_retention	FALSE	canonical	0	0	junction_4	27.342274960215	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	6	False	NA	NA	False	AATAAA	-36	NA	55253126	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55278346_55278441_55280119
ES.9294.14	chr13	+	3175	6	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	1	2	intron_retention	FALSE	canonical	0	0	junction_3	29.3216643456677	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGATGTGTGCGCTCT	7	False	NA	13	True	NA	NA	NA	55253127	55282640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263370_55263438_55270142_55270329_55280119
ES.9294.15	chr13	+	3203	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-17	-2074	2	4	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGATGTGTGCGCTCTTC	8	False	NA	15	True	NA	NA	NA	55253128	55282642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
ES.9294.16	chr13	+	3437	8	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	28.4927488090194	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	8	False	NA	11	True	NA	NA	NA	55253128	55282638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255201_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.17	chr13	+	3099	5	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_2	29.7772983999556	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	15	False	NA	11	True	NA	NA	NA	55253135	55282638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55270142_55270329_55278346_55278441_55280119
ES.9294.19	chr13	+	3532	7	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-2	227	intron_retention	FALSE	canonical	0	0	junction_3	27.8388218141501	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAATAGTCT	17	False	NA	NA	False	AATAAA	-22	NA	55253137	55282865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263370_55263438_55270094_55270329_55278346_55278441_55280119
ES.9294.2	chr13	+	179	1	Intergenic	novelGene_7574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAAGGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	55238626	55238805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55238600_55238800
ES.9294.20	chr13	+	3417	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-8	-2297	-2	227	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAATAGTCT	17	False	NA	NA	False	AATAAA	-22	NA	55253137	55282865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
ES.9294.22	chr13	+	3376	7	NNC	ENSMUSG00000021481.12	novel	1253	7	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1	junction_2	27.633011658763	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTGTCATCCGATG	18	False	NA	3	True	NA	NA	NA	55253138	55282630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255204_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55280119
ES.9294.23	chr13	+	3232	6	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	-8	intron_retention	FALSE	canonical	2	3	junction_5	24.2272573767647	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTGTCATCCGATG	18	False	NA	3	True	NA	NA	NA	55253138	55282630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55280119
ES.9294.24	chr13	+	3234	6	NIC	ENSMUSG00000021481.12	novel	1112	6	NA	NA	-1	-3	intron_retention	FALSE	canonical	1	1	junction_3	26.8432486856565	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATCCGATGTGTGC	18	False	NA	8	True	NA	NA	NA	55253138	55282635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55270094_55270329_55278346_55278441_55280119
ES.9294.25	chr13	+	3277	7	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	-8	intron_retention	FALSE	canonical	1	1	junction_2	32.4794807019242	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTGTCATCCGATG	18	False	NA	3	True	NA	NA	NA	55253138	55282630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255204_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
ES.9294.26	chr13	+	3657	8	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	227	intron_retention	FALSE	canonical	1	1	junction_2	28.274167917528	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAATAGTCT	18	False	NA	NA	False	AATAAA	-22	NA	55253138	55282865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255204_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.27	chr13	+	3481	6	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	241	intron_retention	FALSE	canonical	2	3	junction_5	24.2272573767647	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	18	False	NA	NA	False	AATAAA	-36	NA	55253138	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55280119
ES.9294.28	chr13	+	3528	6	FSM	ENSMUSG00000021481.12	ENSMUST00000161077.2	765	6	-72	-2691	0	241	multi-exon	FALSE	canonical	2	3	junction_5	26.8223787162884	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	19	False	NA	NA	False	AATAAA	-36	NA	55253139	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55280119
ES.9294.29	chr13	+	4867	1	NIC	ENSMUSG00000021481.12	novel	602	4	NA	NA	2	-3778	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACAGTTGCTCTGTG	21	False	NA	NA	False	NA	NA	NA	55253141	55258008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253100_55258000
ES.9294.3	chr13	+	179	1	Intergenic	novelGene_7575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAATTAAAAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	55241994	55242173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55242000_55242200
ES.9294.30	chr13	+	3878	7	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	2	intron_retention	FALSE	canonical	0	0	junction_2	32.6530583900226	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCGATGTGTGCGCTCT	23	False	NA	13	True	NA	NA	NA	55253143	55282640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255800_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
ES.9294.32	chr13	+	3466	6	NIC	ENSMUSG00000021481.12	novel	1112	6	NA	NA	-1	239	intron_retention	FALSE	canonical	1	1	junction_3	26.8432486856565	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCTGTCTTTGTATTG	28	False	NA	NA	False	AATAAA	-34	NA	55253148	55282877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55270094_55270329_55278346_55278441_55280119
ES.9294.33	chr13	+	4061	8	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-1	-3	intron_retention	FALSE	canonical	0	0	junction_2	29.70260759528	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATCCGATGTGTGC	28	False	NA	8	True	NA	NA	NA	55253148	55282635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255800_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
ES.9294.34	chr13	+	3813	6	ISM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	7264	-227	-500	227	3prime_fragment	FALSE	canonical	3	43	junction_3	10.373041983912	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAATAGTCT	7283	False	NA	NA	False	AATAAA	-22	NA	55260403	55282865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.35	chr13	+	10212	3	FSM	ENSMUSG00000021481.12	ENSMUST00000160310.2	644	3	-6858	-2710	2067	241	multi-exon	FALSE	canonical	3	60	junction_1	7.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	9850	False	NA	NA	False	AATAAA	-36	NA	55262970	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55270329_55278346_55278441_55280119
ES.9294.36	chr13	+	3100	4	ISM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	10001	-4	2237	4	3prime_fragment	FALSE	canonical	3	43	junction_1	13.0724477007517	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGATGTGTGCGCTCTTC	NA	False	NA	15	True	NA	NA	NA	55263140	55282642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.37	chr13	+	7532	2	ISM	ENSMUSG00000021481.12	ENSMUST00000162428.8	845	5	12161	-2234	4409	-3	3prime_fragment	FALSE	canonical	2	3	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATCCGATGTGTGC	111	False	NA	8	True	NA	NA	NA	55265312	55282635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55270329_55280119
ES.9294.38	chr13	+	4541	3	FSM	ENSMUSG00000021481.12	ENSMUST00000160310.2	644	3	-1424	-2473	-1424	4	multi-exon	FALSE	canonical	3	60	junction_1	7.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGATGTGTGCGCTCTTC	3203	False	NA	15	True	NA	NA	NA	55268404	55282642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55270329_55278346_55278441_55280119
ES.9294.39	chr13	+	178	1	Intergenic	novelGene_7576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTCACTTGGCAT	6604	False	NA	NA	False	NA	NA	NA	55271805	55271983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55271800_55272000
ES.9294.4	chr13	+	3395	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-53	-9	-37	9	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGCGCTCTTCCACTC	5157	False	NA	20	True	NA	NA	NA	55253086	55282647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.40	chr13	+	181	1	Intergenic	novelGene_7577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGAGAGAGAGAGAG	4711	False	NA	NA	False	NA	NA	NA	55277657	55277838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55277700_55277800
ES.9294.41	chr13	+	4915	1	Genic_Genomic	ENSMUSG00000021481.12	novel	NA	NA	NA	NA	-72	241	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	5018	False	NA	NA	False	AATAAA	-36	NA	55277964	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_55278000_55282900
ES.9294.42	chr13	+	2056	1	ISM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	27319	124	2422	-124	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGTTTTTTAATACT	7512	False	NA	NA	False	NA	NA	NA	55280458	55282514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55280500_55282500
ES.9294.5	chr13	+	3616	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	-42	-241	-26	241	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	5168	False	NA	NA	False	AATAAA	-36	NA	55253097	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ES.9294.6	chr13	+	3604	7	NNC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	-15	241	intron_retention	FALSE	canonical	1	1	junction_2	32.9646275068696	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGTCTTTGTATTGTG	5179	False	NA	NA	False	AATAAA	-36	NA	55253108	55282879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55253332_55255107_55255204_55260848_55260953_55261490_55261584_55270094_55270329_55278346_55278441_55280119
ES.9294.8	chr13	+	3834	1	Genic_Genomic	ENSMUSG00000021481.12	novel	NA	NA	NA	NA	-14	-4843	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGGCTATCTTCTTT	5180	False	NA	NA	False	NA	NA	NA	55253109	55256943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_55253100_55256900
ES.9294.9	chr13	+	3259	5	FSM	ENSMUSG00000021481.12	ENSMUST00000160660.8	663	5	-40	-2556	-14	227	multi-exon	FALSE	canonical	0	0	junction_3	30.2407010500749	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAAAATAGTCT	5180	False	NA	NA	False	AATAAA	-22	NA	55253109	55282865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55278346_55278441_55280119
ES.9295.1	chr13	-	1665	13	FSM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	52	-39	6	39	multi-exon	FALSE	canonical	3	14	junction_9	37.4398591818339	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTAAGCTTTG	NA	False	NA	NA	False	AATAGA	-19	NA	55248061	55176068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.10	chr13	-	2506	15	NNC	ENSMUSG00000025878.17	novel	2936	15	NA	NA	23	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	49.5558332817126	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248044	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223802_55224110_55224267_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.11	chr13	-	2185	16	NNC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	1	8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	48.0872355435642	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAATAGATGGAAGT	NA	False	NA	NA	False	AATATA	-20	NA	55248066	55176099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223272_55223568_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.12	chr13	-	2403	13	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	14	8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	52.5374866167006	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCAATAGATGGAAGT	NA	False	NA	NA	False	AATATA	-20	NA	55248094	55176099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55176532_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.15	chr13	-	2420	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	49.8302443746553	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATCTTATTTCAATAGA	NA	False	NA	NA	False	AATATA	-13	NA	55248075	55176106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55176532_55177228_55177272_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.16	chr13	-	2938	12	NNC	ENSMUSG00000025878.17	novel	2735	4	NA	NA	-16	-10406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.8956751665001	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTTTCCCTCCTCTCA	NA	False	NA	NA	False	NA	NA	NA	55248083	55186513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55187670_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.17	chr13	-	560	4	FSM	ENSMUSG00000025878.17	ENSMUST00000133187.2	2735	4	46	2129	1	192	multi-exon	FALSE	canonical	3	148	junction_3	8.65383665716478	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCATGTTGCTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	55248066	55225077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.18	chr13	-	177	1	Intergenic	novelGene_7572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAGATTGTAGAT	NA	False	NA	NA	False	NA	NA	NA	55229067	55228890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55228900_55229100
ES.9295.2	chr13	-	2533	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	3	395	3	20	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAAGTGTTTTTTTTTTC	NA	False	NA	NA	False	AATATA	-32	NA	55248105	55176087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.3	chr13	-	2640	16	NNC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	21	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	54.5801754811722	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248046	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55220282_55220459_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.4	chr13	-	2769	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	23	10	intron_retention	FALSE	canonical	3	94	junction_9	22.0505068438575	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248044	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9295.5	chr13	-	2624	8	NIC	ENSMUSG00000025878.17	novel	1678	13	NA	NA	14826	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.9236278165906	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55219179	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55203787_55203892_55208078_55208156_55217534
ES.9295.6	chr13	-	5323	9	ISM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	26389	-10	12281	10	3prime_fragment	FALSE	canonical	3	105	junction_5	11.6377618123074	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55221724	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534
ES.9295.7	chr13	-	1496	12	NIC	ENSMUSG00000025878.17	novel	1678	13	NA	NA	21	10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	41.4387928603019	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248046	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55233422_55233508_55240939_55241095_55248009
ES.9295.8	chr13	-	2108	3	NNC	ENSMUSG00000025878.17	novel	1678	13	NA	NA	54933	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	71.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	3489	False	NA	NA	False	AATATA	-22	NA	55179072	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55176532_55177228_55178379_55178548
ES.9295.9	chr13	-	1928	15	NNC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	21	10	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_10	38.5560816029252	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAATAGATGGAAGTGT	NA	False	NA	NA	False	AATATA	-22	NA	55248046	55176097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223272_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ES.9296.1	chr13	+	209	1	Intergenic	novelGene_7578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAAATAAATA	2860	False	NA	NA	False	NA	NA	NA	55293130	55293339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55293100_55293300
ES.9297.1	chr13	+	3200	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	121	3	121	-3	multi-exon	FALSE	canonical	2	5	junction_4	3.40364144505634	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCCTGTGTGGCAGGG	NA	False	NA	NA	False	AATAAA	-17	NA	55300573	55316569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ES.9297.2	chr13	+	3042	17	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	2791	1	-252	-1	3prime_fragment	FALSE	canonical	2	5	junction_3	3.50836055017155	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGTGTGGCAGGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	55303243	55316571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ES.9297.3	chr13	+	175	1	Intergenic	novelGene_7579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAAAAAGAATGTAG	NA	False	NA	NA	False	NA	NA	NA	55307283	55307458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55307300_55307500
ES.9297.4	chr13	+	1992	10	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	8394	26	4917	-26	3prime_fragment	FALSE	canonical	3	7	junction_6	3.52766841475279	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATCTCTGTGTGCCT	NA	False	NA	NA	False	TATAAA	-12	NA	55308846	55316546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ES.9297.5	chr13	+	1467	7	ISM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	13231	26	9754	-26	3prime_fragment	FALSE	canonical	3	7	junction_3	4.16333199893227	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATCTCTGTGTGCCT	NA	False	NA	NA	False	TATAAA	-12	NA	55313683	55316546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ES.9298.1	chr13	+	177	1	Intergenic	novelGene_7580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	429	False	NA	NA	False	NA	NA	NA	55323319	55323496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55323300_55323500
ES.9299.1	chr13	+	174	1	Intergenic	novelGene_7584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAACCCTTCA	8174	False	NA	NA	False	NA	NA	NA	55344142	55344316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55344100_55344300
ES.93.1	chr1	+	6391	40	FSM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	-199	4861	-199	616	multi-exon	TRUE	canonical	1	6	junction_1	5.99769844088307	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGATAGTTGTGCTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	11063489	11369044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11064134_11131549_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.10	chr1	+	10492	39	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	-37208	12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	6.62431724386509	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATTCCTATTAAATTCT	NA	False	NA	NA	False	AATAAA	-28	NA	11131545	11373917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230373_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.11	chr1	+	10503	38	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	-32714	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	6.56217106727211	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAGTTTGACTAATTCC	NA	False	NA	NA	False	AATAAA	-17	NA	11136039	11373906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254681_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.12	chr1	+	1946	16	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	74546	153617	-30519	-7	internal_fragment	FALSE	canonical	3	17	junction_14	3.65999392834955	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTATGTCCTTTCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	11138234	11220288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033
ES.93.13	chr1	+	9516	30	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	119276	-3	14211	3	3prime_fragment	FALSE	canonical	2	17	junction_7	5.10996787664626	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTGACTAATTCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	11182964	11373908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.14	chr1	+	3571	22	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	-8348	-65375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	7.43528390258355	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGGAATCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	11202566	11302747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226468_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905
ES.93.16	chr1	+	7879	18	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	168912	180	21686	-180	3prime_fragment	FALSE	canonical	3	20	junction_7	5.40408662487334	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTAGCCTTTTTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	11232600	11373725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.17	chr1	+	6197	2	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	38811	25471	intron_retention	FALSE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	CATAAA	-36	NA	11249725	11256291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11254101_11254469
ES.93.18	chr1	+	481	3	ISM	ENSMUSG00000048960.14	ENSMUST00000189385.7	2449	6	2	33343	2	-31647	5prime_fragment	FALSE	canonical	1	1	junction_1	15	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGATGTGTTCAGGTAC	NA	False	NA	NA	False	ATTAAA	-18	NA	11334188	11336475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11334320_11335902_11335970_11336192
ES.93.19	chr1	+	259	2	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	11417	-38	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGATGTTTGGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	11365633	11368084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11365740_11367931
ES.93.2	chr1	+	5335	40	FSM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	-99	5817	-99	-34	multi-exon	FALSE	canonical	1	6	junction_1	5.99769844088307	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGATGTTTGGTTTGGAC	NA	False	NA	NA	False	ATTAAA	-28	NA	11063589	11368088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11064134_11131549_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.3	chr1	+	3140	1	FSM	ENSMUSG00000048960.14	ENSMUST00000190935.2	3084	1	-54	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-14	NA	11063687	11066827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11063700_11066800
ES.93.4	chr1	+	5188	40	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	-10	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_33	7.29404934302891	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCCATGATGTAAATAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	11063731	11368071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11064134_11131549_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274405_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.5	chr1	+	5976	40	NNC	ENSMUSG00000048960.14	novel	11053	40	NA	NA	30	615	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	7.2976539239823	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGATAGTTGTGCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	11063771	11369043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11064134_11131549_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230373_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.93.6	chr1	+	175	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAACCAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	11074361	11074536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_11074400_11074500
ES.93.7	chr1	+	5957	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAGAGAACACACATTAG	NA	False	NA	NA	False	NA	NA	NA	11115088	11121045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_11115100_11121000
ES.93.8	chr1	+	6940	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTTGTAATTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11122404	11129344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_11122400_11129300
ES.93.9	chr1	+	4791	39	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	67857	5821	-37208	-38	3prime_fragment	FALSE	canonical	2	17	junction_16	5.02679799285209	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGATGTTTGGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	11131545	11368084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ES.930.1	chr1	-	167	1	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAAAACATTT	NA	False	NA	NA	False	NA	NA	NA	86999199	86999032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_86999000_86999200
ES.9300.1	chr13	+	179	1	Intergenic	novelGene_7585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAGAAAAAAAAAAAA	9118	False	NA	NA	False	NA	NA	NA	55345086	55345265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55345100_55345300
ES.9301.1	chr13	+	7706	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-5851	-1733	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.8581604629264	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	NA	False	NA	29	True	AATAAA	-26	NA	55351743	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55351806_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.10	chr13	+	9479	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-4	4	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATGTGTGAGAATGTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	55357590	55463572	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.100	chr13	+	2546	5	ISM	ENSMUSG00000021488.9	ENSMUST00000224693.2	852	6	-14	-1	-9	1	intron_retention	FALSE	canonical	3	16	junction_1	107.606633159857	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55359873	55388661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502
ES.9301.101	chr13	+	5955	23	NIC	ENSMUSG00000021488.9	novel	852	6	NA	NA	-9	-5046	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	50.6721148477197	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTATATAGAAACAGAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	55359873	55458522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.103	chr13	+	12212	24	NNC	ENSMUSG00000021488.9	novel	852	6	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	54.1233974821375	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTTGCCCTGTGTTTTT	NA	False	NA	16	True	AGTAAA	-19	NA	55359882	55466139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55360147_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.104	chr13	+	5441	19	NNC	ENSMUSG00000021488.9	novel	852	6	NA	NA	2	5984	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	57.8244469637771	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGAGGTTTTTTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	55359884	55447783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55360147_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503
ES.9301.105	chr13	+	6100	24	NIC	ENSMUSG00000021488.9	novel	852	6	NA	NA	-1	-5042	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	81.0358505460639	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAGAAACAGAAACTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	55359886	55458526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.106	chr13	+	8134	23	NIC	ENSMUSG00000021488.9	novel	852	6	NA	NA	13	-2006	intron_retention	FALSE	canonical	3	16	junction_1	52.5120214493235	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGCTGTCCCCAGGGT	NA	False	NA	NA	False	AGTAAA	-13	NA	55359900	55461562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359921_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.107	chr13	+	5398	4	NNC	ENSMUSG00000021488.9	novel	1149	6	NA	NA	388	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.296241115955	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTGTCTTTTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	55360586	55388659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55361131_55361873_55361964_55381707_55385088_55387275
ES.9301.108	chr13	+	11946	23	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	817	-2	combination_of_known_junctions	FALSE	canonical	3	160	junction_22	24.1987722521701	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55361015	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.109	chr13	+	3437	3	Intergenic	novelGene_7588	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	295	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAGAATAAAAAA	5659	False	NA	-18	True	NA	NA	NA	55375456	55387566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55376490_55376639_55378753_55387275
ES.9301.11	chr13	+	6014	23	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-4	-5038	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	31.62764378261	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAGAAACTTATTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	55357590	55458530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.110	chr13	+	3470	1	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	20283	664	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATTGCAATATCAGTAT	1307	False	NA	NA	False	NA	NA	NA	55380481	55383951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55380500_55384000
ES.9301.111	chr13	+	7294	20	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	28906	4315	-24737	-1745	3prime_fragment	FALSE	canonical	3	160	junction_19	24.2678954160108	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGAATGGAATTCGAT	7326	False	NA	17	True	AATAAA	-14	NA	55386500	55461823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.112	chr13	+	7297	20	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-16296	6	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_18	56.2466865752332	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTGTGAGAATGTAAGT	NA	False	NA	NA	False	ATTAAA	-22	NA	55394941	55463574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.113	chr13	+	5265	20	NIC	ENSMUSG00000021488.9	novel	9905	21	NA	NA	-15897	-1743	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	74.9563122989826	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAATGGAATTCGATTC	NA	False	NA	19	True	AATAAA	-16	NA	55395340	55461825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.114	chr13	+	179	1	Intergenic	novelGene_7594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACATTAAAAAAATA	3450	False	NA	NA	False	NA	NA	NA	55408533	55408712	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55408500_55408700
ES.9301.115	chr13	+	4180	16	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	53548	1731	-95	-1731	3prime_fragment	FALSE	canonical	3	160	junction_15	26.9108817312914	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	2106	False	NA	31	True	AATAAA	-28	NA	55411142	55461837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.116	chr13	+	1726	1	Intergenic	novelGene_7595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATACAAAAAAAA	4814	False	NA	NA	False	NA	NA	NA	55418401	55420127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55418400_55420100
ES.9301.117	chr13	+	8297	15	NNC	ENSMUSG00000021488.9	novel	772	2	NA	NA	-13627	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	84.514972710431	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	2723	False	NA	14	True	AGTAAA	-17	NA	55425153	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.118	chr13	+	5225	11	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	72955	1733	-8231	-1733	intron_retention	FALSE	canonical	3	216	junction_1	17.3942519241271	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	8119	False	NA	29	True	AATAAA	-26	NA	55430549	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.119	chr13	+	5290	1	Intergenic	novelGene_7597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGCAAGATGGCGCACG	8456	False	NA	NA	False	NA	NA	NA	55430886	55436176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55430900_55436200
ES.9301.12	chr13	+	12083	25	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55357590	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.120	chr13	+	180	1	Intergenic	novelGene_7598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	327	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATGA	NA	False	NA	NA	False	NA	NA	NA	55433027	55433207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55433000_55433200
ES.9301.121	chr13	+	215	1	Intergenic	novelGene_7599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTACA	NA	False	NA	NA	False	NA	NA	NA	55436549	55436764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55436500_55436800
ES.9301.122	chr13	+	9798	10	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-1226	-1	intron_retention	FALSE	canonical	0	0	junction_3	80.6184428858145	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55437554	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55438069_55438943_55439124_55441370_55441532_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.123	chr13	+	7908	11	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	80270	0	-916	0	3prime_fragment	FALSE	canonical	3	160	junction_10	31.0380411753062	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55437864	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.124	chr13	+	10940	12	Fusion	ENSMUSG00000021486.8_ENSMUSG00000021488.9	novel	12784	23	NA	NA	-874	3036	intron_retention	FALSE	canonical	3	62	junction_10	72.7196586923411	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGACTCTGTTCTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	55437906	55469174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.125	chr13	+	3395	10	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	81347	1741	161	-1741	3prime_fragment	FALSE	canonical	3	160	junction_9	32.3865541373097	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGGAATTCGATTCCA	NA	False	NA	21	True	AATAAA	-18	NA	55438941	55461827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.128	chr13	+	6779	5	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	91943	1	10757	-1	3prime_fragment	FALSE	canonical	3	160	junction_4	41.0700620890692	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	4145	False	NA	14	True	AGTAAA	-17	NA	55449537	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.13	chr13	+	7776	25	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-1	-1734	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCGATTCCACTGGTCA	NA	False	NA	28	True	AATAAA	-25	NA	55357593	55461834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.130	chr13	+	8308	3	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	17509	-2	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	6	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	6298	False	NA	13	True	AGTAAA	-16	NA	55456289	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55458355_55459758_55459797_55459931
ES.9301.131	chr13	+	178	1	Intergenic	novelGene_7600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGTTGAAAT	6682	False	NA	NA	False	NA	NA	NA	55456673	55456851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55456700_55456900
ES.9301.132	chr13	+	6412	2	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	100553	2	19367	-2	3prime_fragment	FALSE	canonical	3	160	junction_1	0	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	8156	False	NA	13	True	AGTAAA	-16	NA	55458147	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55458355_55459931
ES.9301.133	chr13	+	5838	1	Genic_Genomic	ENSMUSG00000021488.9	novel	NA	NA	NA	NA	22933	1413	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGAGCCCATTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	55461713	55467551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_55461700_55467600
ES.9301.134	chr13	+	3936	1	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	104136	472	22950	-472	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACAGCCTTCCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	55461730	55465666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55461700_55465700
ES.9301.135	chr13	+	9008	5	FSM	ENSMUSG00000021486.8_ENSMUSG00000021488.9	ENSMUST00000021942.8	2644	5	-6363	-1	-6363	1	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAGTCAGATAGCTTT	NA	False	NA	19	True	NA	NA	NA	55461949	55473086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ES.9301.136	chr13	+	1699	4	NIC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	-10	-4	intron_retention	FALSE	canonical	3	1299	junction_1	66.594961437701	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGTTCTGGAGTCAG	5543	False	NA	11	True	NA	NA	NA	55469821	55473078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55470892_55472143_55472258_55472339_55472419_55472642
ES.9301.137	chr13	+	925	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1521	198	2	-195	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCACCACACCCAGCTC	5555	False	NA	NA	False	NA	NA	NA	55469833	55472887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ES.9301.138	chr13	+	1110	5	NNC	ENSMUSG00000021486.8	novel	2644	5	NA	NA	16	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	589.51351765672	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGGAGTCAGATAGCT	5569	False	NA	17	True	NA	NA	NA	55469847	55473084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55470095_55470665_55470892_55472141_55472258_55472339_55472419_55472642
ES.9301.15	chr13	+	2593	5	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	1	intron_retention	FALSE	canonical	3	116	junction_1	64.355943781441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55357594	55388661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502
ES.9301.16	chr13	+	2241	4	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	0	78572	0	-1093	5prime_fragment	FALSE	canonical	3	116	junction_1	68.9025076144225	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAGAATAAAAAA	NA	False	NA	-18	True	NA	NA	NA	55357594	55387566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502
ES.9301.17	chr13	+	955	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	0	101691	0	754	5prime_fragment	FALSE	canonical	3	116	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGACTCCAGTCCCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	55357594	55361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55357689_55361016
ES.9301.18	chr13	+	2689	6	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_3	118.115875308952	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55363227_55363325_55381707_55381844_55386502
ES.9301.19	chr13	+	9334	25	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1733	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	76.680241098995	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	NA	False	NA	29	True	AATAAA	-26	NA	55357594	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55459797_55459931
ES.9301.2	chr13	+	7716	25	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-5843	-1747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.7018264536984	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCAAGAATGGAATTCG	NA	False	NA	15	True	AATAAA	-12	NA	55351751	55461821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55351806_55354538_55354571_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.21	chr13	+	1656	5	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_4	93.1987124374581	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55388354
ES.9301.22	chr13	+	12787	23	FSM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	0	-3	0	3	multi-exon	FALSE	canonical	3	116	junction_1	35.1453887033198	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCCCTGTGTTTTTAT	NA	False	NA	18	True	AGTAAA	-21	NA	55357594	55466141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.23	chr13	+	13771	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1	intron_retention	FALSE	canonical	2	8	junction_11	72.4202449005496	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55357594	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.24	chr13	+	8486	23	FSM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	0	4298	0	-1728	multi-exon	FALSE	canonical	3	116	junction_1	35.1453887033198	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACTGGTCAACTTGG	NA	False	NA	34	True	AATAAA	-31	NA	55357594	55461840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.25	chr13	+	7580	25	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1929	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCCACTGTTCTTCTT	NA	False	NA	NA	False	AAAACA	-10	NA	55357594	55461639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.26	chr13	+	6729	22	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-5041	intron_retention	FALSE	canonical	0	0	junction_6	59.8851887169474	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAAACAGAAACTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	55357594	55458527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408261_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.27	chr13	+	12041	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55357594	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.28	chr13	+	8572	24	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1739	intron_retention	FALSE	canonical	1	2	junction_2	73.3732205208619	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55357594	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361964_55363227_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.29	chr13	+	7596	23	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1739	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	59.7676803952999	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55357594	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.3	chr13	+	7587	26	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-5218	-1923	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	90.6222400959058	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTTCTTCTTTCCTTA	NA	False	NA	NA	False	AAAACA	-16	NA	55352376	55461645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55352422_55354538_55354571_55361016_55361131_55361873_55361964_55363268_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.30	chr13	+	12820	24	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	2	0	intron_retention	FALSE	canonical	3	62	junction_22	57.0444724197568	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55357596	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.31	chr13	+	5904	23	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	3	-5047	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	58.914369151863	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTATATAGAAACAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	55357597	55458521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446436_55447543_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.32	chr13	+	2054	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	4	100588	4	0	5prime_fragment	FALSE	canonical	3	116	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCTGTCAATCTCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	55357598	55362980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55357689_55361016
ES.9301.33	chr13	+	1528	5	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	6	-1057	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	64.355943781441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTGGCTTGTTTGTTTG	NA	False	NA	18	True	AATAAA	-29	NA	55357600	55387602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502
ES.9301.34	chr13	+	5974	23	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	174	-5049	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	53.6433739640595	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCTTATATAGAAACAGA	NA	False	NA	NA	False	AATAAA	-12	NA	55357768	55458519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357838_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.35	chr13	+	7995	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	404	-1731	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.0281067144199	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	NA	False	NA	31	True	AATAAA	-28	NA	55357998	55461837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.36	chr13	+	6160	23	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-449	-5043	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	49.6858727448077	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAGAAACAGAAACTTA	NA	False	NA	NA	False	AATAAA	-18	NA	55358098	55458525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.37	chr13	+	12194	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-449	-2	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.0281067144199	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55358098	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.38	chr13	+	7876	26	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-309	-1745	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	87.5219195401929	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGAATGGAATTCGAT	NA	False	NA	17	True	AATAAA	-14	NA	55358238	55461823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55363227_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.4	chr13	+	7755	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-4919	-1739	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_1	53.9400703644913	636	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55352675	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55352793_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.40	chr13	+	6744	22	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-291	-5044	intron_retention	FALSE	canonical	3	21	junction_1	50.3299769120126	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATAGAAACAGAAACTT	NA	False	NA	NA	False	AATAAA	-17	NA	55358256	55458524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.41	chr13	+	7622	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-289	-1746	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	80.166910002552	620	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCAAGAATGGAATTCGA	NA	False	NA	16	True	AATAAA	-13	NA	55358258	55461822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.42	chr13	+	7739	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-289	-1743	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	69.3702430716408	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAATGGAATTCGATTC	NA	False	NA	19	True	AATAAA	-16	NA	55358258	55461825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381691_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.43	chr13	+	7446	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-273	-2004	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.0281067144199	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTGTCCCCAGGGTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	55358274	55461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.44	chr13	+	7919	24	NIC	ENSMUSG00000021488.9	novel	1149	6	NA	NA	-216	-2005	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	51.7521722693219	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGCTGTCCCCAGGGTA	NA	False	NA	NA	False	AGTAAA	-14	NA	55358331	55461563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55358879_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.45	chr13	+	6375	23	NIC	ENSMUSG00000021488.9	novel	1149	6	NA	NA	-132	-5042	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	50.4746888536822	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAGAAACAGAAACTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	55358415	55458526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55358879_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.46	chr13	+	7847	24	NIC	ENSMUSG00000021488.9	novel	1149	6	NA	NA	126	-1735	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	51.7521722693219	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTCGATTCCACTGGTC	NA	False	NA	27	True	AATAAA	-24	NA	55358673	55461833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55358879_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.47	chr13	+	6018	23	NIC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-64	-5049	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	52.6509832107421	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCTTATATAGAAACAGA	NA	False	NA	NA	False	AATAAA	-12	NA	55359289	55458519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359403_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.48	chr13	+	7665	24	NIC	ENSMUSG00000021488.9	novel	426	5	NA	NA	20	-1741	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	53.7568916758261	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGGAATTCGATTCCA	NA	False	NA	21	True	AATAAA	-18	NA	55359373	55461827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359403_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.49	chr13	+	2138	2	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	129	0	intron_retention	FALSE	canonical	3	38	junction_1	0	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCTGTCAATCTCTAA	NA	False	NA	NA	False	ATTAAA	-16	NA	55359482	55362980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016
ES.9301.5	chr13	+	12030	25	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-4841	6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	68.6292373717079	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCTGTGTTTTTATTGT	NA	False	NA	21	True	AGTAAA	-24	NA	55352753	55466144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55352793_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.50	chr13	+	7846	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	138	-1734	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	64.4796344894176	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCGATTCCACTGGTCA	NA	False	NA	28	True	AATAAA	-25	NA	55359491	55461834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.51	chr13	+	980	6	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-135	1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	108.536445491825	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55359496	55388661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
ES.9301.52	chr13	+	6065	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-126	-5040	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	46.3507334987028	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAACAGAAACTTATTT	NA	False	NA	NA	False	AATAAA	-21	NA	55359505	55458528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.53	chr13	+	7951	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-125	-1733	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	NA	False	NA	29	True	AATAAA	-26	NA	55359506	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.54	chr13	+	6230	23	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-121	-5027	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	31.62764378261	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCCATTTACCTTAT	NA	False	NA	NA	False	AATAAA	-34	NA	55359510	55458541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.55	chr13	+	12242	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	77.9422752034407	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359515	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.56	chr13	+	9522	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-115	5	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTGTGAGAATGTAAG	NA	False	NA	NA	False	ATTAAA	-21	NA	55359516	55463573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.57	chr13	+	7783	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-114	-1733	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	623	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	NA	False	NA	29	True	AATAAA	-26	NA	55359517	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.58	chr13	+	7640	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-112	-1738	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	67.8496910716062	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTCGATTCCACTG	NA	False	NA	24	True	AATAAA	-21	NA	55359519	55461830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.59	chr13	+	6225	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-97	-5044	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	88.9452370758981	540	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATAGAAACAGAAACTT	NA	False	NA	NA	False	AATAAA	-17	NA	55359534	55458524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55363227_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408378_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.6	chr13	+	322	1	Intergenic	novelGene_7586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGACAGCTTTGGCTGT	NA	False	NA	NA	False	NA	NA	NA	55354018	55354340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55354000_55354300
ES.9301.60	chr13	+	12222	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359538	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.61	chr13	+	7837	26	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-75	-1734	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.157214439651	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCGATTCCACTGGTCA	NA	False	NA	28	True	AATAAA	-25	NA	55359556	55461834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55363268_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.62	chr13	+	8008	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-72	-1743	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	72.8027681860762	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAATGGAATTCGATTC	NA	False	NA	19	True	AATAAA	-16	NA	55359559	55461825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55383322_55383443_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.63	chr13	+	7881	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-56	-1741	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	54.3068715255816	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGGAATTCGATTCCA	NA	False	NA	21	True	AATAAA	-18	NA	55359575	55461827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359821_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.64	chr13	+	7600	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-45	-2004	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTGTCCCCAGGGTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	55359586	55461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.65	chr13	+	12917	23	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-45	0	intron_retention	FALSE	canonical	3	116	junction_1	35.1453887033198	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359586	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.66	chr13	+	7480	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-42	-2004	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	78.1243555528976	609	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTGTCCCCAGGGTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	55359589	55461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425342_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.67	chr13	+	3355	2	NNC	ENSMUSG00000021488.9	novel	339	2	NA	NA	-42	206	intron_retention	FALSE	non_canonical	0	0	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTCGGGTTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	55359589	55363186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359632_55359873
ES.9301.68	chr13	+	12051	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	64.4796344894176	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55359589	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.69	chr13	+	7633	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-40	-2004	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCTGTCCCCAGGGTAC	NA	False	NA	NA	False	AGTAAA	-15	NA	55359591	55461564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.7	chr13	+	179	1	Intergenic	novelGene_7587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAGAGTGAGTAGGGC	NA	False	NA	NA	False	NA	NA	NA	55354020	55354199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55354000_55354200
ES.9301.70	chr13	+	11920	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.0492650903655	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55359591	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.71	chr13	+	12011	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359592	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.72	chr13	+	1647	5	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	-27	1060	-27	-1059	5prime_fragment	FALSE	canonical	3	116	junction_1	64.355943781441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTGGCTTGTTTGTT	NA	False	NA	16	True	AATAAA	-27	NA	55359604	55387600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502
ES.9301.73	chr13	+	12180	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	84.7897209948789	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55359608	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55381707_55381844_55383322_55383443_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.74	chr13	+	8034	26	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-22	-1739	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_11	80.8289453104517	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55359609	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.75	chr13	+	7891	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-22	-1728	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACTGGTCAACTTGG	NA	False	NA	34	True	AATAAA	-31	NA	55359609	55461840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.76	chr13	+	3441	4	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-17	1	intron_retention	FALSE	canonical	3	116	junction_1	68.9025076144225	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTCTTTTTTTTCC	NA	False	NA	NA	False	AATACA	-16	NA	55359614	55388661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502
ES.9301.77	chr13	+	12088	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.674254472095	726	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCCTTGCCCTGTGT	NA	False	NA	12	True	AGTAAA	-15	NA	55359615	55466135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359760_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.78	chr13	+	6991	28	Fusion	ENSMUSG00000021486.8_ENSMUSG00000021488.9	novel	1001	6	NA	NA	-12	-1	multi-exon	FALSE	canonical	0	0	junction_24	359.150579208712	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGGAGTCAGATAGCT	NA	False	NA	17	True	NA	NA	NA	55359619	55473084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931_55460128_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ES.9301.79	chr13	+	892	2	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-6	754	intron_retention	FALSE	canonical	3	38	junction_1	0	274	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGACTCCAGTCCCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	55359625	55361877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359657_55361016
ES.9301.8	chr13	+	8552	24	NNC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-33	-1733	intron_retention	FALSE	canonical	3	62	junction_22	57.0444724197568	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGATTCCACTGGTCAA	NA	False	NA	29	True	AATAAA	-26	NA	55357561	55461835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.81	chr13	+	8581	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-3	-1731	intron_retention	FALSE	canonical	2	3	junction_1	54.9467999654783	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	NA	False	NA	31	True	AATAAA	-28	NA	55359628	55461837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359821_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.82	chr13	+	12911	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	62	junction_22	57.0444724197568	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55359629	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.83	chr13	+	7716	23	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-2	-1728	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	60.265870993553	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACTGGTCAACTTGG	NA	False	NA	34	True	AATAAA	-31	NA	55359629	55461840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.84	chr13	+	12166	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-2	-3	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGCCCTTGCCCTGTGT	NA	False	NA	12	True	AGTAAA	-15	NA	55359629	55466135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.85	chr13	+	6840	22	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	-2	-5041	intron_retention	FALSE	canonical	3	116	junction_1	31.7480158110158	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAAACAGAAACTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	55359629	55458527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149
ES.9301.87	chr13	+	7849	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	1	-1739	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	85.7711378654687	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55359632	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425086_55425241_55425344_55425489_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.88	chr13	+	7909	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	2	-1745	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	72.646009583	621	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGAATGGAATTCGAT	NA	False	NA	17	True	AATAAA	-14	NA	55359633	55461823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55363227_55363325_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.9	chr13	+	7750	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	-10	-1731	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTCCACTGGTCAACT	NA	False	NA	31	True	AATAAA	-28	NA	55357584	55461837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.90	chr13	+	3127	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	3	24696	3	473	intron_retention	FALSE	canonical	3	116	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCTGTGTGTATGTGT	NA	False	NA	NA	False	NA	NA	NA	55359634	55363964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55359814_55361016
ES.9301.91	chr13	+	7628	23	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	63	-1739	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	72.3739713953655	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGAATTCGATTCCACT	NA	False	NA	23	True	AATAAA	-20	NA	55359694	55461829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359821_55361016_55361131_55361873_55361964_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.92	chr13	+	9681	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	66	188	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGAGTCTCCTTTCACT	NA	False	NA	NA	False	NA	NA	NA	55359697	55463756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.94	chr13	+	2611	5	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	68	1	68	0	intron_retention	FALSE	canonical	3	116	junction_1	64.355943781441	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGTTGTCTTTTTTTT	NA	False	NA	NA	False	AATACA	-14	NA	55359699	55388659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502
ES.9301.95	chr13	+	11786	23	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	70	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	74.1844501538436	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCCCTTGCCCTGTGTT	NA	False	NA	13	True	AGTAAA	-16	NA	55359701	55466136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.97	chr13	+	8518	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	77	-1745	intron_retention	FALSE	canonical	3	62	junction_22	57.0444724197568	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAGAATGGAATTCGAT	NA	False	NA	17	True	AATAAA	-14	NA	55359708	55461823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55359814_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
ES.9301.98	chr13	+	9178	21	NIC	ENSMUSG00000021488.9	novel	426	5	NA	NA	82	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	62.8144091749656	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCCTTGCCCTGTGTTTT	NA	False	NA	15	True	AGTAAA	-18	NA	55359713	55466138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9301.99	chr13	+	11999	24	NIC	ENSMUSG00000021488.9	novel	852	6	NA	NA	-15	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	51.9336132869254	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCCTTGCCCTGTGTTT	NA	False	NA	14	True	AGTAAA	-17	NA	55359867	55466137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55359921_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ES.9302.1	chr13	+	955	1	Intergenic	novelGene_7601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGACGCTGG	183	False	NA	NA	False	NA	NA	NA	55478840	55479795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55478800_55479800
ES.9303.1	chr13	+	160	1	Intergenic	novelGene_7605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACAAGA	NA	False	NA	NA	False	NA	NA	NA	55512286	55512446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55512300_55512400
ES.9304.1	chr13	+	4089	4	NIC	ENSMUSG00000052087.15	novel	1846	10	NA	NA	60	281	intron_retention	FALSE	canonical	0	0	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTTTGTTGCTGTTCT	NA	False	NA	NA	False	AGTAAA	-17	NA	55527041	55532781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55527260_55528712_55531058_55531147_55531230_55531337
ES.9305.1	chr13	+	173	1	Intergenic	novelGene_7610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATGTATATGAGTA	NA	False	NA	NA	False	NA	NA	NA	55563931	55564104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55563900_55564100
ES.9306.1	chr13	+	177	1	Intergenic	novelGene_7612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATAATT	NA	False	NA	NA	False	NA	NA	NA	55572012	55572189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55572000_55572200
ES.9307.1	chr13	-	336	1	Intergenic	novelGene_7581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGAACAAAACAAAACAAAA	123	False	NA	NA	False	NA	NA	NA	55329626	55329290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55329300_55329600
ES.9307.10	chr13	-	138	1	Intergenic	novelGene_7593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACTAAAAATAAAACA	7629	False	NA	NA	False	NA	NA	NA	55407604	55407466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55407500_55407600
ES.9307.11	chr13	-	5686	14	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55455180	55413012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55416335_55424333_55424453_55425084_55425241_55425344_55425487_55430469_55430593_55437864_55438067_55438941_55439122_55441368_55441522_55443790_55444004_55446374_55446488_55447501_55447772_55449537_55449657_55450651_55450790_55454744
ES.9307.12	chr13	-	159	1	Intergenic	novelGene_7596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	9803	False	NA	NA	False	NA	NA	NA	55422458	55422299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55422300_55422500
ES.9307.13	chr13	-	232	2	Antisense	novelGene_ENSMUSG00000052087.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1462	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAACCAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	55538208	55442843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55442869_55538001
ES.9307.14	chr13	-	219	2	Antisense	novelGene_ENSMUSG00000052087.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1462	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAACCAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	55538211	55442843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55442869_55538017
ES.9307.15	chr13	-	271	3	Antisense	novelGene_ENSMUSG00000052087.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1462	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAACCAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	55538211	55442844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55442883_55478554_55478578_55538001
ES.9307.16	chr13	-	2196	7	NNC	ENSMUSG00000021484.9	novel	645	2	NA	NA	-16	43622	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	899.626403940362	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAC	2823	False	NA	NA	False	NA	NA	NA	55510612	55448023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55448164_55497918_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.17	chr13	-	1133	1	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTGAAGAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	55455177	55454044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55454000_55455200
ES.9307.18	chr13	-	5138	1	Genic_Genomic	ENSMUSG00000034789.9	novel	NA	NA	NA	NA	-31	2903	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGACATAGTGACTTAAA	6410	False	NA	NA	False	NA	NA	NA	55469790	55464652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_55464700_55469800
ES.9307.19	chr13	-	1507	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	1	7	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTTATTAGTGCTTAC	6443	False	NA	NA	False	GATAAA	-22	NA	55469757	55467548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.2	chr13	-	205	1	Intergenic	novelGene_7582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAATCCCAGCATTCA	123	False	NA	NA	False	NA	NA	NA	55329626	55329421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55329400_55329600
ES.9307.20	chr13	-	2100	1	Genic_Genomic	ENSMUSG00000034789.9	novel	NA	NA	NA	NA	-16	17	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACCTAGTTGTTCCTG	6425	False	NA	0	True	AATAAA	-36	NA	55469775	55467675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_55467700_55469800
ES.9307.21	chr13	-	1405	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-33	7	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGTGTCAAAACACCTA	6408	False	NA	-10	True	AATAAA	-26	NA	55469792	55467685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.23	chr13	-	1212	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-34	-10	-33	5	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGGTGTCAAAACACC	6408	False	NA	-12	True	AATAAA	-24	NA	55469792	55467687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.24	chr13	-	1537	5	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	1	-2	intron_retention	FALSE	canonical	3	480	junction_4	57.220516425492	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCACTGGGTGTCA	6443	False	NA	-19	True	AATAAA	-17	NA	55469757	55467694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202
ES.9307.25	chr13	-	1966	2	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	1	-3	1	-2	intron_retention	FALSE	canonical	3	549	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCACTGGGTGTCA	6443	False	NA	-19	True	AATAAA	-17	NA	55469757	55467694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55468028_55468124
ES.9307.26	chr13	-	1344	7	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	26	-2	intron_retention	FALSE	canonical	0	0	junction_3	207.474295596667	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCACTGGGTGTCA	6482	False	NA	-19	True	AATAAA	-17	NA	55469718	55467694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55468028_55468124_55468188_55468315_55468676_55468735_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.27	chr13	-	1604	5	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-18	1	intron_retention	FALSE	canonical	3	458	junction_4	48.324424466309	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGTGCACTGGGTGT	6423	False	NA	-21	True	AATAAA	-15	NA	55469777	55467696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.29	chr13	-	1489	6	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	1	intron_retention	FALSE	canonical	3	458	junction_5	45.25218226782	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGTGCACTGGGTGT	6441	False	NA	-21	True	AATAAA	-15	NA	55469759	55467696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468028_55468124_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.3	chr13	-	177	2	Intergenic	novelGene_7583	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAATTGA	NA	False	NA	NA	False	NA	NA	NA	55488122	55329452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55329609_55488101
ES.9307.30	chr13	-	1697	5	FSM	ENSMUSG00000034789.9	ENSMUST00000224936.2	1592	5	-64	-41	-49	0	multi-exon	FALSE	canonical	3	547	junction_4	37.1618083521241	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6392	False	NA	-22	True	AATAAA	-14	NA	55469808	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914
ES.9307.31	chr13	-	1859	3	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	-23	0	-22	0	intron_retention	FALSE	canonical	3	549	junction_1	45	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6419	False	NA	-22	True	AATAAA	-14	NA	55469781	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55468028_55468124_55468188_55468315
ES.9307.32	chr13	-	1380	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	19	junction_1	203.272121934011	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6443	False	NA	-22	True	AATAAA	-14	NA	55469757	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468050_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.33	chr13	-	610	4	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	281.947197578238	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6481	False	NA	-22	True	AATAAA	-14	NA	55469719	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55468028_55468124_55468188_55468315_55468367_55469553
ES.9307.34	chr13	-	1438	4	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-7	0	intron_retention	FALSE	canonical	2	8	junction_3	278.67583716968	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6449	False	NA	-22	True	AATAAA	-14	NA	55469751	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55468028_55468124_55468188_55468315_55469272_55469662
ES.9307.35	chr13	-	1756	4	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	1	0	intron_retention	FALSE	canonical	3	458	junction_3	73.8933164922392	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6443	False	NA	-22	True	AATAAA	-14	NA	55469757	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468028_55468124_55468188_55468315_55469272_55469350
ES.9307.36	chr13	-	1312	7	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_1	205.409888326298	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6440	False	NA	-22	True	AATAAA	-14	NA	55469760	55467697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55467979_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.37	chr13	-	1163	8	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	193.89077505921	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCTGTGTGCACTGGGT	6468	False	NA	-23	True	AATAAA	-13	NA	55469732	55467698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468050_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.38	chr13	-	1930	2	NIC	ENSMUSG00000034789.9	novel	1592	5	NA	NA	1	-2	intron_retention	FALSE	canonical	3	639	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTGTGTGCACTGGG	6443	False	NA	-24	True	AATAAA	-12	NA	55469757	55467699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468188_55468315
ES.9307.39	chr13	-	1543	5	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	3	-2	intron_retention	FALSE	canonical	3	458	junction_4	70.5638009180345	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTGTGTGCACTGGG	6445	False	NA	-24	True	AATAAA	-12	NA	55469755	55467699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55468028_55468124_55468188_55468315_55468994_55469202_55469272_55469350
ES.9307.4	chr13	-	157	1	Intergenic	novelGene_7589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	55380442	55380285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55380300_55380400
ES.9307.40	chr13	-	1151	8	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-33	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.729300779606	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTGTGTGCACTGGG	6408	False	NA	-24	True	AATAAA	-12	NA	55469792	55467699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55467979_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.41	chr13	-	1206	8	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	-49	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	196.343306169452	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGCTGTGTGCACTGGG	6392	False	NA	-24	True	AATAAA	-12	NA	55469808	55467699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55468028_55468134_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ES.9307.42	chr13	-	1609	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-284	2	-219	-2	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGCGTACAGTCTATCA	5871	False	NA	-9	True	NA	NA	NA	55477855	55472982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ES.9307.43	chr13	-	1759	6	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-286	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	37.4400854699879	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGAGCGTACAGTCTA	5804	False	NA	-12	True	NA	NA	NA	55477922	55472985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476543_55477081_55477188_55477410
ES.9307.45	chr13	-	954	6	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-1335	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.0113496106262	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGGTTTTGCCCCGA	9092	False	NA	5	True	ATTAAA	-20	NA	55478971	55473286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55478877
ES.9307.46	chr13	-	1351	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	-337	313	-272	1	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	5818	False	NA	-2	True	ATTAAA	-13	NA	55477908	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ES.9307.47	chr13	-	1693	6	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-1395	1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	35.0234207352737	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	9032	False	NA	-2	True	ATTAAA	-13	NA	55479031	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55478191
ES.9307.48	chr13	-	1156	5	NIC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-13	1	intron_retention	FALSE	canonical	3	87	junction_2	5.87367006223537	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6142	False	NA	-2	True	ATTAAA	-13	NA	55477584	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55473712_55473825_55474010_55476182_55476457_55477081_55477188_55477410
ES.9307.49	chr13	-	1791	4	NNC	ENSMUSG00000021485.15	novel	1742	4	NA	NA	-3	1	intron_retention	FALSE	canonical	0	0	junction_2	45.9081208018315	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6177	False	NA	-2	True	ATTAAA	-13	NA	55477549	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55474055_55476182_55477188_55477410
ES.9307.5	chr13	-	4047	3	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	4581	False	NA	NA	False	AATACA	-14	NA	55396611	55381250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55381842_55386500_55386672_55393326
ES.9307.50	chr13	-	1911	6	NNC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-182	1	intron_retention	FALSE	canonical	0	0	junction_2	46.3119854897196	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	5908	False	NA	-2	True	ATTAAA	-13	NA	55477818	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55474129_55476182_55476298_55476426_55476988_55477081_55477188_55477410
ES.9307.51	chr13	-	1767	4	FSM	ENSMUSG00000021485.15	ENSMUST00000146181.8	1742	4	-24	-1	1	1	multi-exon	FALSE	canonical	3	87	junction_2	6.23609564462324	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6156	False	NA	-2	True	ATTAAA	-13	NA	55477570	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55473712_55473825_55474010_55476182_55477188_55477410
ES.9307.52	chr13	-	997	5	NIC	ENSMUSG00000021485.15	novel	1327	6	NA	NA	-13	1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	39.2006058626649	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTGTCCATGGTTTT	6142	False	NA	-2	True	ATTAAA	-13	NA	55477584	55473293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55473712_55473825_55474010_55476182_55476298_55477081_55477188_55477410
ES.9307.55	chr13	-	619	3	NNC	ENSMUSG00000021485.15	novel	1296	5	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAGTTCCTGTCCATGG	6167	False	NA	-6	True	ATTAAA	-9	NA	55477559	55473297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55473712_55473825_55473892_55477420
ES.9307.56	chr13	-	170	1	Intergenic	novelGene_7602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAAGATCACTGC	7414	False	NA	NA	False	NA	NA	NA	55480649	55480479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55480500_55480600
ES.9307.57	chr13	-	168	1	Intergenic	novelGene_7603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	55489660	55489492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55489500_55489700
ES.9307.58	chr13	-	4827	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	2	737	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	806.958177354936	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTGCTTGGTTTT	3013	False	NA	-7	True	AATAAA	-13	NA	55510422	55490908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55491015_55491065_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.59	chr13	-	3760	10	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-4	735	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1010.77844344267	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTTGGCTGCTTGGTT	2835	False	NA	-9	True	AATAAA	-11	NA	55510600	55490910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55491015_55491849_55491964_55492422_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.6	chr13	-	5029	4	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGGTTAGTTTAGTTT	4581	False	NA	NA	False	NA	NA	NA	55396611	55384318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55385075_55385195_55385530_55386017_55386672_55393326
ES.9307.60	chr13	-	4414	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-100	1	-100	-1	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGAGTTGTGTGCTCTG	2739	False	NA	-4	True	NA	NA	NA	55510696	55491646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.61	chr13	-	3749	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-67	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	806.958177354936	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGAGTTGTGTGCTCT	2944	False	NA	-5	True	NA	NA	NA	55510491	55491647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55491964_55492422_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.62	chr13	-	3876	7	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	920.999170587152	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTGAGTTGTGTGCT	3004	False	NA	-7	True	NA	NA	NA	55510431	55491649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499241_55500834_55500877_55509933_55510053_55510200
ES.9307.65	chr13	-	7350	7	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	12	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	899.626403940362	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGTGTGAGTTGTGTG	3023	False	NA	-9	True	NA	NA	NA	55510412	55491651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55497177_55497949_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.66	chr13	-	4084	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-32	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	806.958177354936	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGTGTGAGTTGTGTG	2807	False	NA	-9	True	NA	NA	NA	55510628	55491651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494005_55494261_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.68	chr13	-	4064	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_4	849.581913985596	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTAGTGTGAGTTGTG	3023	False	NA	-11	True	NA	NA	NA	55510412	55491653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499296_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.69	chr13	-	4362	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	857.229543235602	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTAGTGTGAGTTGTG	3011	False	NA	-11	True	NA	NA	NA	55510424	55491653	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509706_55510053_55510200
ES.9307.7	chr13	-	228	1	Intergenic	novelGene_7590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGTGGAGGAGTTTCAG	NA	False	NA	NA	False	AATAGA	-12	NA	55389065	55388837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55388800_55389100
ES.9307.70	chr13	-	3346	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-22	991	-22	-991	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGTATTCCTCAGCT	2817	False	NA	0	True	AAAAAG	-14	NA	55510618	55492636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.71	chr13	-	2786	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-32	1561	-32	1199	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGCTGATGGTCTCTGG	2807	False	NA	2	True	AATAAA	-19	NA	55510628	55493206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.72	chr13	-	2524	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-3	1197	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_4	849.581913985596	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGGCTGATGGTCTCT	3008	False	NA	0	True	AATAAA	-17	NA	55510427	55493208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499296_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.73	chr13	-	2537	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	52	1196	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	845.109750148416	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCGGCTGATGGTCTC	3063	False	NA	-1	True	AATAAA	-16	NA	55510372	55493209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496117_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.74	chr13	-	2571	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	2	1196	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	862.149212901179	851	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGCGGCTGATGGTCTC	3013	False	NA	-1	True	AATAAA	-16	NA	55510422	55493209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499349_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.76	chr13	-	1543	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	184	2588	12	172	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGTCCTAAGGGCTTT	3023	False	NA	NA	False	ACTAAA	-20	NA	55510412	55494233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.77	chr13	-	1459	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	-51	2907	-51	-147	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCCCAGCTGAGACA	2788	False	NA	-1	True	ATTAAA	-19	NA	55510647	55494552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.8	chr13	-	173	1	Intergenic	novelGene_7591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	3987	False	NA	NA	False	NA	NA	NA	55397205	55397032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55397000_55397200
ES.9307.80	chr13	-	1175	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-6	-149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	806.958177354936	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGCCCAGCTGAGA	3005	False	NA	-3	True	ATTAAA	-17	NA	55510430	55494554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200_55510323_55510387
ES.9307.82	chr13	-	1201	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	5	-150	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_3	802.618647850616	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGCCCAGCTGAG	3016	False	NA	-4	True	ATTAAA	-16	NA	55510419	55494555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499219_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.83	chr13	-	1415	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	-32	-153	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	848.412082200914	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCTTGCCCAGCT	2807	False	NA	-7	True	ATTAAA	-13	NA	55510628	55494558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499065_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.84	chr13	-	1221	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	2	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	854.029416880917	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCTTGCCCAGCT	3013	False	NA	-7	True	ATTAAA	-13	NA	55510422	55494558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500765_55500877_55509933_55510053_55510200
ES.9307.85	chr13	-	1194	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	10	-153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	853.44327788754	840	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCTTGCCCAGCT	3021	False	NA	-7	True	ATTAAA	-13	NA	55510414	55494558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496222_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ES.9307.86	chr13	-	1142	9	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	12	-153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	806.958177354936	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCTTGCCCAGCT	3023	False	NA	-7	True	ATTAAA	-13	NA	55510412	55494558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200_55510318_55510393
ES.9307.88	chr13	-	183	1	Intergenic	novelGene_7604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	826	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	55497949	55497766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55497800_55497900
ES.9307.89	chr13	-	211	1	Intergenic	novelGene_7606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATATATTCTCTTCCTT	NA	False	NA	NA	False	NA	NA	NA	55538214	55538003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55538000_55538200
ES.9307.9	chr13	-	4045	1	Intergenic	novelGene_7592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCTTGGAGATTATTAG	7640	False	NA	NA	False	NA	NA	NA	55407593	55403548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55403500_55407600
ES.9307.90	chr13	-	171	2	Intergenic	novelGene_7608	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55586505	55538039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55538158_55586452
ES.9307.91	chr13	-	171	2	Intergenic	novelGene_7607	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	4705	junction_1	0	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55538391	55538039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55538163_55538343
ES.9307.92	chr13	-	201	1	Intergenic	novelGene_7609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATCAGGAATGATGGC	NA	False	NA	NA	False	NA	NA	NA	55543286	55543085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55543100_55543300
ES.9307.93	chr13	-	246	1	Intergenic	novelGene_7611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGGTTCCTTCCCCCCC	4159	False	NA	NA	False	NA	NA	NA	55566961	55566715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55566700_55567000
ES.9308.1	chr13	-	1623	1	Intergenic	novelGene_7613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55592477	55590854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55590900_55592500
ES.9309.1	chr13	+	3013	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224653.2	2976	16	-31	-6	-31	1	multi-exon	FALSE	non_canonical	0	0	junction_15	162.375641304011	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTTTTATTTCT	NA	False	NA	29	True	AATACA	-31	NA	55592853	55608741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593095_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.10	chr13	+	3944	14	NIC	ENSMUSG00000074886.12	novel	2169	16	NA	NA	-34	0	intron_retention	FALSE	canonical	3	190	junction_13	80.9296575271119	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	NA	False	NA	23	True	AATACA	-25	NA	55593116	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.11	chr13	+	3093	6	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-33	-5099	intron_retention	FALSE	canonical	3	452	junction_3	23.2602665504934	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593117	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55599397_55599515_55600139_55600859
ES.9309.12	chr13	+	3326	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-26	15	intron_retention	FALSE	non_canonical	0	0	junction_14	125.436218445707	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTTCAATGAT	NA	False	NA	43	True	AATACA	-45	NA	55593124	55608755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.13	chr13	+	3408	14	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-25	0	intron_retention	FALSE	non_canonical	0	0	junction_13	130.165074983892	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593125	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.14	chr13	+	3945	14	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-25	1	intron_retention	FALSE	canonical	3	425	junction_5	26.8085476080311	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTTTTATTTCT	NA	False	NA	29	True	AATACA	-31	NA	55593125	55608741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.15	chr13	+	3590	15	NIC	ENSMUSG00000074886.12	novel	2169	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	190	junction_14	78.3407001891255	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	NA	False	NA	23	True	AATACA	-25	NA	55593127	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.16	chr13	+	3757	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	190	junction_14	78.20472870509	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.17	chr13	+	2930	16	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	15	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_15	158.985729618171	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTTCAATGAT	NA	False	NA	43	True	AATACA	-45	NA	55593127	55608755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.18	chr13	+	4073	13	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	21	junction_6	129.635386115572	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598398_55598740_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.19	chr13	+	3433	14	NIC	ENSMUSG00000074886.12	novel	2769	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	104	junction_13	103.129378157018	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	NA	False	NA	26	True	AATACA	-28	NA	55593127	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ES.9309.2	chr13	+	3043	17	NNC	ENSMUSG00000074886.12	novel	2976	16	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	204.266131171445	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	NA	False	NA	23	True	AATACA	-25	NA	55592912	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593095_55597120_55597217_55597618_55597714_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.20	chr13	+	3954	4	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	-5099	intron_retention	FALSE	canonical	3	447	junction_3	26.2805377925694	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593127	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599235_55599332
ES.9309.21	chr13	+	2879	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	179.5637181863	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598188_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602476_55606657_55606744_55606825_55606961_55607596
ES.9309.22	chr13	+	3311	4	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	-5119	intron_retention	FALSE	canonical	3	493	junction_1	6.68331255192114	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55593127	55601767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55600139_55600859
ES.9309.23	chr13	+	2989	16	NNC	ENSMUSG00000074886.12	novel	2971	16	NA	NA	-23	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	188.446208063026	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGCCTGCCTCCTTT	NA	False	NA	22	True	AATACA	-24	NA	55593127	55608734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599530_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.24	chr13	+	2277	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	52	intron_retention	FALSE	non_canonical	0	0	junction_14	125.439492690821	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAGCGTTCTTAATTCC	NA	False	NA	NA	False	GGGGCT	-37	NA	55593127	55607920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.25	chr13	+	3244	5	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	-5099	intron_retention	FALSE	canonical	3	493	junction_1	5.93190525885234	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593127	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55600139_55600859_55600898_55600984
ES.9309.26	chr13	+	3933	4	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	-5099	intron_retention	FALSE	canonical	3	460	junction_3	20.4015249974658	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593127	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599397_55599515
ES.9309.27	chr13	+	4052	3	ISM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-146	5802	-23	-5099	intron_retention	FALSE	canonical	3	493	junction_1	8	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593127	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55593374_55597120_55597217_55598077
ES.9309.28	chr13	+	4512	11	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	425	junction_3	27.5544914669097	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593127	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.29	chr13	+	2293	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-145	21	-22	-21	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCATGTCTTCCCTGT	NA	False	NA	NA	False	NA	NA	NA	55593128	55607568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.3	chr13	+	3577	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-241	-1167	-118	16	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTGTTTCAATGATT	NA	False	NA	44	True	NA	NA	NA	55593032	55608756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.31	chr13	+	3164	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	-22	-148	-22	148	multi-exon	FALSE	non_canonical	0	0	junction_15	121.188264925097	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGCTAGGTGGG	NA	False	NA	NA	False	NA	NA	NA	55593128	55608888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.32	chr13	+	3124	6	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	-5099	intron_retention	FALSE	canonical	3	460	junction_3	17.9041894538681	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	NA	False	NA	NA	False	NA	NA	NA	55593128	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599397_55599515_55600139_55600859_55600898_55600984
ES.9309.33	chr13	+	4080	12	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	1	intron_retention	FALSE	non_canonical	0	0	junction_11	140.853948154618	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTTTTATTTCT	NA	False	NA	29	True	AATACA	-31	NA	55593128	55608741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.35	chr13	+	3009	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	160.448067056672	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593128	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.36	chr13	+	2792	7	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	-5120	intron_retention	FALSE	canonical	3	425	junction_3	31.1073410414112	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55593128	55601766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859
ES.9309.37	chr13	+	3676	13	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_3	134.858233176753	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	NA	False	NA	26	True	AATACA	-28	NA	55593128	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598398_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.38	chr13	+	3470	14	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	-6	intron_retention	FALSE	non_canonical	0	0	junction_13	170.820435843535	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCACCACTGCCTGCCT	NA	False	NA	17	True	AATACA	-19	NA	55593128	55608729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.39	chr13	+	3304	13	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-22	0	intron_retention	FALSE	non_canonical	0	0	junction_4	181.646864364165	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593128	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55599141_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.40	chr13	+	3650	15	ISM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	-22	0	-22	0	intron_retention	FALSE	canonical	3	425	junction_5	27.6814975411817	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593128	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.42	chr13	+	4121	13	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-21	0	intron_retention	FALSE	canonical	3	425	junction_3	29.1089905928277	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593129	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.43	chr13	+	3118	17	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	175.913286522082	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593129	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.44	chr13	+	4501	14	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-21	0	intron_retention	FALSE	canonical	3	31	junction_2	168.945668939024	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593129	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.45	chr13	+	3852	14	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-20	0	intron_retention	FALSE	canonical	3	190	junction_13	81.1142083293636	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593130	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.46	chr13	+	4402	12	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	425	junction_3	28.0819344298486	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTGCCTCCTTTTAT	NA	False	NA	25	True	AATACA	-27	NA	55593136	55608737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.47	chr13	+	2985	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224995.2	2971	16	-21	7	-13	-2	multi-exon	FALSE	non_canonical	0	0	junction_15	161.603135283117	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCACTGCCTGCCTCCTT	-20	True	NA	21	True	AATACA	-23	NA	55593137	55608733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599530_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.48	chr13	+	2928	16	NNC	ENSMUSG00000074886.12	novel	1997	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	178.056720051661	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	-20	True	NA	23	True	AATACA	-25	NA	55593137	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598777_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ES.9309.49	chr13	+	4166	11	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-13	0	intron_retention	FALSE	canonical	3	104	junction_10	116.877029394146	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-20	True	NA	28	True	AATACA	-30	NA	55593137	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ES.9309.5	chr13	+	3052	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	-43	-15	-43	15	multi-exon	FALSE	non_canonical	0	0	junction_15	121.188264925097	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGGTGTTTCAATGAT	NA	False	NA	43	True	AATACA	-45	NA	55593107	55608755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.50	chr13	+	2906	6	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-8	-5099	intron_retention	FALSE	canonical	3	438	junction_4	27.3744406335545	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	-15	True	NA	NA	False	NA	NA	NA	55593142	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599397_55599515_55599657_55599947_55600139_55600859
ES.9309.51	chr13	+	3327	14	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-8	0	intron_retention	FALSE	non_canonical	0	0	junction_13	167.814669542354	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-15	True	NA	28	True	AATACA	-30	NA	55593142	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606889_55606961_55607594
ES.9309.52	chr13	+	2921	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-5	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_14	167.868829380415	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-12	True	NA	28	True	AATACA	-30	NA	55593145	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.54	chr13	+	2812	14	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	174.666783353621	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	-9	True	NA	23	True	AATACA	-25	NA	55593148	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.55	chr13	+	3013	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	121.188264925097	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	-9	True	NA	26	True	AATACA	-28	NA	55593148	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607575
ES.9309.56	chr13	+	2958	16	NNC	ENSMUSG00000074886.12	novel	1997	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	146.529026324328	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGCCTGCCTCCTTT	-9	True	NA	22	True	AATACA	-24	NA	55593148	55608734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593388_55597164_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ES.9309.57	chr13	+	3384	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-2	-1	intron_retention	FALSE	non_canonical	0	0	junction_15	181.209565604762	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGCCTGCCTCCTTT	-9	True	NA	22	True	AATACA	-24	NA	55593148	55608734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.58	chr13	+	3557	5	ISM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-123	5802	0	-5099	intron_retention	FALSE	canonical	3	452	junction_3	20.820662813657	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	-7	True	NA	NA	False	NA	NA	NA	55593150	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740
ES.9309.59	chr13	+	3723	14	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	425	junction_5	27.6668686573269	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	-6	True	NA	26	True	AATACA	-28	NA	55593151	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.60	chr13	+	3542	17	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	181.384260618169	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-6	True	NA	28	True	AATACA	-30	NA	55593151	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598188_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.61	chr13	+	3336	16	NIC	ENSMUSG00000074886.12	novel	2769	16	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_8	130.413428074805	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	-4	True	NA	26	True	AATACA	-28	NA	55593153	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.64	chr13	+	2694	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-1	-281	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	160.448067056672	571	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATCCACCCTTCCCTGT	0	True	NA	NA	False	CATAAA	-19	NA	55593157	55608454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.66	chr13	+	2921	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	156.725435785715	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	2	True	NA	28	True	AATACA	-30	NA	55593159	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606889_55606961_55607594
ES.9309.67	chr13	+	5436	11	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	425	junction_3	29.0497848529038	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	3	True	NA	28	True	AATACA	-30	NA	55593160	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.68	chr13	+	3573	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_15	121.188264925097	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	3	True	NA	28	True	AATACA	-30	NA	55593160	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55607155_55607199
ES.9309.69	chr13	+	2813	7	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	2	-5099	intron_retention	FALSE	canonical	3	425	junction_3	32.4640827171609	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATGGGGTCTTGGTTG	3	True	NA	NA	False	NA	NA	NA	55593160	55601787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598842_55599141_55599235_55599332_55600139_55600859_55600898_55600984
ES.9309.7	chr13	+	3134	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-42	0	intron_retention	FALSE	non_canonical	0	0	junction_14	125.434937196093	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593108	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.70	chr13	+	3580	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-112	-1299	3	148	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGCTAGGTGGG	4	True	NA	NA	False	NA	NA	NA	55593161	55608888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.71	chr13	+	4677	11	NIC	ENSMUSG00000074886.12	novel	2769	16	NA	NA	4	0	intron_retention	FALSE	canonical	3	445	junction_8	23.5416651917404	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	5	True	NA	26	True	AATACA	-28	NA	55593162	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.72	chr13	+	3417	16	NNC	ENSMUSG00000074886.12	novel	2169	16	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	132.249696491985	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACTGCCTGCCTCCTTT	6	True	NA	22	True	AATACA	-24	NA	55593163	55608734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.73	chr13	+	4035	13	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	425	junction_4	26.9051833089628	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	6	True	NA	28	True	AATACA	-30	NA	55593163	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.74	chr13	+	3414	16	NIC	ENSMUSG00000074886.12	novel	2971	16	NA	NA	5	1	combination_of_known_junctions	FALSE	canonical	2	12	junction_7	133.8444204623	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGCCTCCTTTTATTT	6	True	NA	27	True	AATACA	-29	NA	55593163	55608739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599530_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ES.9309.75	chr13	+	3383	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	121.188264925097	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	6	True	NA	28	True	AATACA	-30	NA	55593163	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607192
ES.9309.76	chr13	+	3846	12	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_11	140.835464635771	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	6	True	NA	23	True	AATACA	-25	NA	55593163	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.77	chr13	+	3000	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	162.105589731577	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	6	True	NA	28	True	AATACA	-30	NA	55593163	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598058_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.78	chr13	+	2996	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	5	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	163.242015288821	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCACTGCCTGCCTCC	6	True	NA	19	True	AATACA	-21	NA	55593163	55608731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598296_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607593
ES.9309.79	chr13	+	3513	14	NNC	ENSMUSG00000074886.12	novel	2769	16	NA	NA	5	0	intron_retention	FALSE	non_canonical	0	0	junction_6	174.905181413265	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	6	True	NA	26	True	AATACA	-28	NA	55593163	55608738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55599235_55599332_55599397_55599515_55599650_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.8	chr13	+	3021	17	NNC	ENSMUSG00000074886.12	novel	2769	16	NA	NA	-37	-4	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_9	184.671964236589	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCACTGCCTGCCTCC	NA	False	NA	19	True	AATACA	-21	NA	55593113	55608731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ES.9309.80	chr13	+	4796	10	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	445	junction_7	23.3761511897156	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	7	True	NA	28	True	AATACA	-30	NA	55593164	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55599235_55599332_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.81	chr13	+	2864	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	163.929036137253	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	15	True	NA	28	True	AATACA	-30	NA	55593172	55608740	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599646_55600044_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.83	chr13	+	3948	15	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-54	-4	intron_retention	FALSE	canonical	3	31	junction_2	154.283068760387	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCACTGCCTGCCTCC	58	False	NA	19	True	AATACA	-21	NA	55593215	55608731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825
ES.9309.84	chr13	+	2948	14	ISM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	4649	5	4526	0	3prime_fragment	FALSE	non_canonical	0	0	junction_13	127.764900588875	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	493	False	NA	23	True	AATACA	-25	NA	55597799	55608735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.9309.9	chr13	+	2309	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	-36	53	intron_retention	FALSE	non_canonical	0	0	junction_14	125.434937196093	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGCGTTCTTAATTCCA	NA	False	NA	NA	False	GGGGCT	-38	NA	55593114	55607921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ES.931.1	chr1	-	2108	11	FSM	ENSMUSG00000026246.13	ENSMUST00000027455.13	2092	11	-17	1	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTCGTATCAGTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87017650	87014416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87015063_87015150_87015268_87015379_87015572_87015654_87015790_87015895_87015969_87016077_87016213_87016427_87016601_87016671_87016847_87016994_87017111_87017216_87017334_87017421
ES.9310.1	chr13	-	2910	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	-17	-515	-12	0	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGGCCTGCTGCTCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	55635891	55621241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9310.10	chr13	-	2579	14	NNC	ENSMUSG00000034675.18	novel	2378	14	NA	NA	4	220	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	19.4160307097179	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTGGGACCCTTCCCC	NA	False	NA	-23	True	AATAAA	-17	NA	55635870	55621536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629789_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9310.12	chr13	-	2386	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	33	521	-12	-6	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCAGATTGTAGCTTAG	NA	False	NA	NA	False	NA	NA	NA	55635891	55621762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9310.13	chr13	-	5897	5	NIC	ENSMUSG00000034675.18	novel	2119	12	NA	NA	1001	2749	intron_retention	FALSE	canonical	3	57	junction_3	2.82842712474619	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAACAAAAGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	55633472	55626441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55629226_55629351_55629504_55629725_55630301_55630504_55630618_55631199
ES.9310.3	chr13	-	2735	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	-67	272	-67	243	multi-exon	FALSE	canonical	3	54	junction_13	5.80246835866034	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACCCTCGCTGCTTGG	NA	False	NA	0	True	AATAAA	-40	NA	55635991	55621513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9310.4	chr13	-	3131	12	NIC	ENSMUSG00000034675.18	novel	2940	14	NA	NA	10	243	intron_retention	FALSE	canonical	3	54	junction_11	6.20982958470475	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTACCCTCGCTGCTTGG	NA	False	NA	0	True	AATAAA	-40	NA	55635864	55621513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55622107_55622268_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9310.6	chr13	-	3629	7	NIC	ENSMUSG00000034675.18	novel	3078	15	NA	NA	-5	229	intron_retention	FALSE	canonical	3	60	junction_2	4.52462398683274	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCCCCTTCTCTTTA	NA	False	NA	-14	True	AATAAA	-26	NA	55629962	55621527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55625494_55625589_55625650_55629161_55629226_55629351
ES.9310.8	chr13	-	2683	13	NIC	ENSMUSG00000034675.18	novel	2940	14	NA	NA	10	222	intron_retention	FALSE	canonical	3	54	junction_12	6.02944165463658	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCTTCCCCTT	NA	False	NA	-21	True	AATAAA	-19	NA	55635864	55621534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ES.9311.1	chr13	+	179	1	Intergenic	novelGene_7614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAATAAAATA	3343	False	NA	NA	False	NA	NA	NA	55638362	55638541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55638400_55638500
ES.9312.1	chr13	-	1693	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	8	-4	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCTCCCCGCTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55661251	55646224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ES.9312.2	chr13	-	3585	3	ISM	ENSMUSG00000021493.16	ENSMUST00000128910.8	1694	11	11190	1	6773	-1	3prime_fragment	FALSE	canonical	3	72	junction_2	2	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCCTCCCCGCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	55650060	55646225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55646548_55646706_55646823_55646913
ES.9312.3	chr13	-	1576	12	NNC	ENSMUSG00000021493.16	novel	1697	13	NA	NA	1841	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	40.3329121395033	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55658681	55646226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55658617
ES.9312.4	chr13	-	2732	11	NIC	ENSMUSG00000021493.16	novel	3573	12	NA	NA	1	-2	intron_retention	FALSE	canonical	3	56	junction_4	34.0963341138017	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661249	55646226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55655180_55655300_55655438_55656020_55656140_55656592_55656857_55660124_55660232_55661179
ES.9312.5	chr13	-	3165	10	NIC	ENSMUSG00000021493.16	novel	3573	12	NA	NA	1	-2	intron_retention	FALSE	canonical	1	1	junction_5	45.2190826100969	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGTGCCTCCCCGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	55661249	55646226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55655694_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ES.9312.6	chr13	-	1692	13	NNC	ENSMUSG00000021493.16	novel	1697	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	43.2636458883848	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTCTGTGCCTCCCC	NA	False	NA	-9	True	AATAAA	-13	NA	55661247	55646230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654190_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ES.9312.7	chr13	-	1209	7	NNC	ENSMUSG00000021493.16	novel	1006	8	NA	NA	7	2	intron_retention	TRUE	non_canonical	0	0	junction_2	51.8515509250527	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTGTCTCCCATC	NA	False	NA	0	True	AATAAA	-19	NA	55661227	55654583	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55655180_55655300_55655438_55656001_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ES.9313.1	chr13	-	7103	16	Fusion	ENSMUSG00000021494.10_ENSMUSG00000035711.6	novel	2205	17	NA	NA	-9	0	intron_retention	FALSE	canonical	2	3	junction_1	240.250480401878	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGCCTCTGGCCCACA	NA	False	NA	NA	False	AATAAA	-23	NA	55684343	55671043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_55671925_55672031_55672394_55675144_55679105_55679190_55679263_55679347_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.10	chr13	-	2358	14	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	646	junction_13	42.3654151681164	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684343	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55682130_55682228_55682302_55683101_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.11	chr13	-	3259	12	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	646	junction_11	39.8229552971027	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684345	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.12	chr13	-	2085	17	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	175.718524919827	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684337	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679284_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.13	chr13	-	3695	12	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	646	junction_11	43.3431436235716	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684343	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680975_55681764_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.15	chr13	-	3096	14	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	642	junction_9	46.0875164398955	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684326	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.16	chr13	-	2185	16	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-1	intron_retention	FALSE	canonical	2	2	junction_11	182.151536425643	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684346	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682302_55683101_55683239_55683358_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.17	chr13	-	2237	15	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	646	junction_14	44.2585746333005	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684337	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.18	chr13	-	3006	15	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	642	junction_9	44.432073816934	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684346	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.19	chr13	-	2872	16	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	642	junction_9	44.3019939355631	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684345	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.2	chr13	-	6394	19	Fusion	ENSMUSG00000021494.10_ENSMUSG00000035711.6	novel	2205	17	NA	NA	-10	-1	intron_retention	FALSE	canonical	2	3	junction_1	224.811580915175	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCGTTCTGCCTCTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	55684344	55671048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_55671925_55672031_55672394_55675144_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.20	chr13	-	3123	14	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	2	junction_4	192.927892223061	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684337	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679525_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.21	chr13	-	2077	17	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	176.45179051231	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684337	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683358_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.23	chr13	-	2205	16	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	642	junction_9	45.3725320724628	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684345	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.24	chr13	-	3527	12	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	179	-1	intron_retention	FALSE	canonical	3	642	junction_8	45.5616918978547	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684058	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680975_55681764_55681902_55681975_55683239_55683371_55683433_55683542_55683618_55683698
ES.9313.25	chr13	-	2154	16	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	642	junction_9	44.9204729370572	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684346	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.26	chr13	-	2160	16	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-5	-1	intron_retention	FALSE	canonical	2	2	junction_12	182.237012949864	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684339	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683358_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.27	chr13	-	4306	9	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	646	junction_8	42.3805306125348	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684345	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679742_55679850_55679923_55680160_55680293_55680811_55683859_55684108_55684220_55684293
ES.9313.28	chr13	-	4590	10	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-4	-1	intron_retention	FALSE	canonical	3	646	junction_9	47.588514020367	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684338	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.29	chr13	-	4077	11	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-10	-1	intron_retention	FALSE	canonical	3	646	junction_10	45.8152812934724	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684344	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.3	chr13	-	4881	7	Fusion	ENSMUSG00000021494.10_ENSMUSG00000035711.6	novel	1644	6	NA	NA	-2388	-2	intron_retention	FALSE	canonical	0	0	junction_2	378.236551497722	400	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCCGTTCTGCCTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	55679497	55671049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_55671925_55672031_55672205_55672293_55672394_55675144_55678545_55678993_55679105_55679190_55679263_55679347
ES.9313.30	chr13	-	3169	13	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	646	junction_12	42.0733486505016	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684336	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.31	chr13	-	3982	12	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-1	intron_retention	FALSE	canonical	3	646	junction_11	42.0870801321449	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	False	NA	-6	True	ATTAAA	-20	NA	55684345	55678229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679742_55679850_55679923_55680160_55680293_55680811_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.32	chr13	-	3838	11	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-2	intron_retention	FALSE	canonical	0	0	junction_3	217.248705404658	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684345	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679726_55679850_55679923_55680160_55680975_55681764_55681902_55681975_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.33	chr13	-	2143	17	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	238.763080466286	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684346	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682360_55683101_55683239_55683358_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.34	chr13	-	2174	16	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-2	intron_retention	FALSE	canonical	0	0	junction_3	181.480528493341	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684346	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679284_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.35	chr13	-	2934	15	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	646	junction_14	44.466049878944	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684344	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.36	chr13	-	3429	12	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-2	intron_retention	FALSE	canonical	0	0	junction_7	210.477143887819	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684337	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680267_55680811_55680975_55681764_55681902_55681975_55683618_55683698_55684220_55684293
ES.9313.37	chr13	-	3237	13	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-2	intron_retention	FALSE	canonical	3	642	junction_7	42.5587012907532	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684346	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.39	chr13	-	1780	15	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	188.108902457256	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684345	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.4	chr13	-	2986	17	FSM	ENSMUSG00000021494.10	ENSMUST00000021956.9	2205	17	118	-899	-19	899	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCCATAATTTGTATTC	NA	False	NA	NA	False	NA	NA	NA	55684353	55677323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.40	chr13	-	2217	16	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	3	-2	intron_retention	FALSE	canonical	1	2	junction_4	179.769037007675	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55684331	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679525_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.41	chr13	-	3770	8	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	641	-2	intron_retention	FALSE	canonical	3	695	junction_4	33.8266891368219	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTCTTCCTCTCTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	55683596	55678230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679742_55679850_55679923_55680160_55680293_55680811_55683433_55683542
ES.9313.42	chr13	-	2961	15	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	642	junction_9	45.3737314996693	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCAGTTCTTCCTCTCTC	NA	False	NA	-8	True	ATTAAA	-18	NA	55684337	55678231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.43	chr13	-	4200	9	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	642	junction_5	50.3684859311852	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCAGTTCTTCCTCTCTC	NA	False	NA	-8	True	ATTAAA	-18	NA	55684338	55678231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55680975_55681764_55681902_55681975_55682130_55682228_55683859_55684108_55684220_55684293
ES.9313.44	chr13	-	3268	13	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-54	-3	intron_retention	FALSE	canonical	3	642	junction_7	44.8227217925115	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCAGTTCTTCCTCTCTC	NA	False	NA	-8	True	ATTAAA	-18	NA	55684388	55678231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.45	chr13	-	3427	12	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-12	-3	intron_retention	FALSE	canonical	3	646	junction_11	42.9847176379376	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCAGTTCTTCCTCTCTC	NA	False	NA	-8	True	ATTAAA	-18	NA	55684346	55678231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55683433_55683542_55683618_55683698_55684220_55684293
ES.9313.46	chr13	-	3040	14	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-2	-4	intron_retention	FALSE	canonical	3	642	junction_9	44.8598079227264	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCAGTTCTTCCTCTCT	NA	False	NA	-9	True	ATTAAA	-17	NA	55684336	55678232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.48	chr13	-	3191	13	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-10	-4	intron_retention	FALSE	canonical	0	0	junction_5	203.871879021006	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACCAGTTCTTCCTCTCT	NA	False	NA	-9	True	ATTAAA	-17	NA	55684344	55678232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679759_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.49	chr13	-	2021	17	NNC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	174.553716660517	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCAGTTCTTCCTCT	NA	False	NA	-11	True	ATTAAA	-15	NA	55684348	55678234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679440_55679635_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.5	chr13	-	2196	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	4	-1	4	1	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTCCTCTCTCACCC	NA	False	NA	-4	True	ATTAAA	-22	NA	55684467	55678227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.50	chr13	-	2207	16	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-4	-6	intron_retention	FALSE	canonical	3	642	junction_8	42.4879590786221	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCAGTTCTTCCTCT	NA	False	NA	-11	True	ATTAAA	-15	NA	55684338	55678234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.51	chr13	-	2387	14	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-11	-6	intron_retention	FALSE	canonical	3	642	junction_8	42.4647434687862	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCAGTTCTTCCTCT	NA	False	NA	-11	True	ATTAAA	-15	NA	55684345	55678234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108
ES.9313.52	chr13	-	4247	11	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	67	-7	intron_retention	FALSE	canonical	3	661	junction_9	42.1074815205089	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGACCAGTTCTTCCTC	NA	False	NA	-12	True	ATTAAA	-14	NA	55684170	55678235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108
ES.9313.53	chr13	-	3171	13	NIC	ENSMUSG00000021494.10	novel	2205	17	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	642	junction_9	44.5485845890629	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGACCAGTTCTTCCTC	NA	False	NA	-12	True	ATTAAA	-14	NA	55684337	55678235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.6	chr13	-	3087	14	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	-11	0	intron_retention	FALSE	canonical	3	642	junction_9	43.7173546842866	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684345	55678228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55683433_55683542_55683859_55684108_55684220_55684293
ES.9313.7	chr13	-	3084	14	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	-1	0	intron_retention	FALSE	canonical	3	642	junction_9	45.453272709454	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684324	55678228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9313.8	chr13	-	3017	14	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	646	junction_13	45.652274614906	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684326	55678228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ES.9314.1	chr13	+	2612	1	Intergenic	novelGene_7615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTATGGGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	55713310	55715922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55713300_55715900
ES.9315.1	chr13	+	230	1	Intergenic	novelGene_7616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAAGAATCTATAAAAAC	1790	False	NA	NA	False	NA	NA	NA	55716557	55716787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55716600_55716800
ES.9316.1	chr13	-	10838	3	FSM	ENSMUSG00000021495.11	ENSMUST00000225703.2	1234	3	-7776	-1828	1233	1828	multi-exon	FALSE	canonical	3	162	junction_1	5.5	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTTTTGGATTTTAA	NA	False	NA	NA	False	NA	NA	NA	55698909	55685300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55687526_55689436_55689535_55690394
ES.9316.10	chr13	-	9236	8	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	39	0	intron_retention	FALSE	canonical	3	48	junction_6	49.9223887445221	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718874	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55701163_55702029_55704039_55712332_55712394_55717517
ES.9316.12	chr13	-	4087	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-7	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	54.5902808696942	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718920	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.13	chr13	-	4169	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	57.3887713266294	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718915	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704064_55712332_55712394_55717517_55718705_55718882
ES.9316.14	chr13	-	5200	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	6	-1	intron_retention	FALSE	canonical	3	48	junction_8	45.9511280910437	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718927	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.16	chr13	-	4342	11	FSM	ENSMUSG00000021495.11	ENSMUST00000021957.8	4341	11	-2	1	-2	-1	multi-exon	FALSE	canonical	3	48	junction_9	46.3227805728456	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718935	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.17	chr13	-	2001	4	NIC	ENSMUSG00000021495.11	novel	2950	9	NA	NA	27	-1	intron_retention	FALSE	canonical	3	20	junction_3	69.6770327216142	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718886	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55691603_55718587
ES.9316.18	chr13	-	3195	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-6	-1	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	48.4171686720963	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718919	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
ES.9316.19	chr13	-	3712	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-432	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.2420977002015	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718203	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55687915_55688023_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712389_55717517
ES.9316.2	chr13	-	4237	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-14	3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	53.9170659439106	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGATGGTGATTTGCTG	NA	False	NA	-1	True	GATAAA	-22	NA	55718947	55687125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.21	chr13	-	4162	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	57.3432466283894	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718905	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712389_55717517_55718705_55718849
ES.9316.22	chr13	-	5046	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	50	-1	intron_retention	FALSE	canonical	3	29	junction_4	46.5755724668767	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718863	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.23	chr13	-	4418	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	28	-1	intron_retention	FALSE	canonical	3	48	junction_8	43.8729929019304	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718885	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.25	chr13	-	3639	14	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	42	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.6190816515889	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718871	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55687915_55688108_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55717711_55718587
ES.9316.26	chr13	-	4591	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	50.0879226959953	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718922	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.27	chr13	-	3298	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	55.7746350714675	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718915	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.28	chr13	-	6074	7	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2106	-1	intron_retention	FALSE	canonical	3	21	junction_5	62.9603049547888	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55702248	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036
ES.9316.29	chr13	-	4395	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	36	-1	intron_retention	FALSE	canonical	3	8	junction_9	54.8400592520234	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718877	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9316.3	chr13	-	3231	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-45	2	intron_retention	FALSE	canonical	3	6	junction_6	51.4855847019218	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGATGGTGATTTGCT	NA	False	NA	-2	True	GATAAA	-21	NA	55717816	55687126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.30	chr13	-	5033	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	32	-1	intron_retention	FALSE	canonical	3	6	junction_6	55.1129031966692	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718881	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.31	chr13	-	5398	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	7	-1	intron_retention	FALSE	canonical	0	0	junction_8	57.3793957943825	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718926	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55713114_55713188_55717517
ES.9316.32	chr13	-	3607	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	169	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	65.1202733409497	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718744	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697821_55698036_55698218_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.33	chr13	-	2928	9	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	18	-1	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	55.5842547399891	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718895	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55718587
ES.9316.34	chr13	-	3010	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	55.0813943178638	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718915	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587_55718705_55718885
ES.9316.35	chr13	-	3501	13	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_12	54.402818554434	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTATGATGGTGATTT	NA	False	NA	-5	True	GATAAA	-18	NA	55718925	55687129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55717711_55718587
ES.9316.37	chr13	-	3387	14	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	163	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	59.3587029954477	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718750	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55695095_55695175_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55717694_55718587
ES.9316.38	chr13	-	4792	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	54.1923418700038	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718917	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55718705_55718885
ES.9316.39	chr13	-	4226	13	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	55.0067546357314	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718931	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55718705_55718861
ES.9316.4	chr13	-	4301	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-7	1	intron_retention	FALSE	canonical	0	0	junction_10	53.4723292928221	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATGATGGTGATTTGC	NA	False	NA	-3	True	GATAAA	-20	NA	55718920	55687127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55717694_55718587
ES.9316.42	chr13	-	3970	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	60.920932363187	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718934	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55704416_55704528_55718587
ES.9316.43	chr13	-	7621	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2026	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53.2812245438193	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55708747	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690390_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795
ES.9316.44	chr13	-	6061	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	4	1	intron_retention	FALSE	canonical	2	7	junction_9	58.4746436553254	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718909	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.45	chr13	-	4205	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	54.3724194789969	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718936	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703932_55704039_55712332_55712394_55717517
ES.9316.46	chr13	-	4393	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	98	1	intron_retention	FALSE	canonical	3	21	junction_4	48.6394901289066	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAGTATGATGGTGATT	NA	False	NA	-6	True	GATAAA	-17	NA	55718815	55687130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.47	chr13	-	1843	5	NIC	ENSMUSG00000021495.11	novel	4786	5	NA	NA	57	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	62.8589691293136	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718856	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55718587
ES.9316.48	chr13	-	3027	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	60.0100814575619	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718932	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.49	chr13	-	4991	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	12	0	intron_retention	FALSE	non_canonical	0	0	junction_10	53.4723292928221	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718901	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55718705_55718885
ES.9316.5	chr13	-	5257	4	ISM	ENSMUSG00000021495.11	ENSMUST00000224486.2	4786	5	4860	-3	-4002	0	3prime_fragment	FALSE	canonical	3	159	junction_3	6.0184900284226	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55695282	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596
ES.9316.50	chr13	-	2452	8	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-976	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.2566722810012	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55701118	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700049_55700160_55700774
ES.9316.53	chr13	-	5335	9	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-5	0	intron_retention	FALSE	canonical	3	48	junction_7	44.0220115396832	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718938	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.54	chr13	-	3898	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	60.7911177722535	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718889	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55700904_55702029_55702262_55703932_55704039_55712332_55712394_55717517
ES.9316.55	chr13	-	2806	9	NNC	ENSMUSG00000021495.11	novel	2950	9	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	65.7636630290619	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718909	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703932_55704039_55718587
ES.9316.56	chr13	-	3663	14	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	57.145407804443	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718897	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55718057_55718587_55718705_55718858
ES.9316.57	chr13	-	4233	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	56.6982734735021	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718903	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.58	chr13	-	3591	13	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-262	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.3663960018121	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718033	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55687915_55688023_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.59	chr13	-	4362	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	7	0	intron_retention	FALSE	canonical	3	6	junction_7	53.7312758084153	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718906	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.6	chr13	-	4313	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	57.0597055723214	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718920	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9316.60	chr13	-	3244	9	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-3	0	intron_retention	FALSE	canonical	3	8	junction_8	51.0427210775444	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55717774	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9316.61	chr13	-	5251	8	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	2885	0	intron_retention	FALSE	canonical	0	0	junction_1	62.0654690546973	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55703836	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55687915_55688108_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029
ES.9316.62	chr13	-	3211	11	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	52.3645872704063	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718876	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.63	chr13	-	5016	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	31	0	intron_retention	FALSE	canonical	1	1	junction_7	55.5457769171819	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718882	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703932_55704039_55712332_55712394_55717517
ES.9316.64	chr13	-	10304	8	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	57	0	intron_retention	FALSE	canonical	3	8	junction_7	57.3421524620378	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718856	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9316.65	chr13	-	3898	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	0	intron_retention	FALSE	non_canonical	0	0	junction_9	56.3165655518477	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718915	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587_55718705_55718861
ES.9316.66	chr13	-	4220	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	57.1852145255273	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718906	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703932_55704039_55712332_55712394_55717517
ES.9316.67	chr13	-	5130	9	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-7	0	intron_retention	FALSE	canonical	3	8	junction_8	52.8936137449503	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718920	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9316.68	chr13	-	5384	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_1	53.9255041701049	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718921	55687131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55687915_55688108_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.69	chr13	-	4132	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	1	-1	intron_retention	FALSE	canonical	2	7	junction_9	53.1387654642233	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTAGTATGATGGTGA	NA	False	NA	-8	True	GATAAA	-15	NA	55718932	55687132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
ES.9316.7	chr13	-	4188	13	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	55.0067546357314	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718915	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55718705_55718885
ES.9316.70	chr13	-	5463	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	387	-2	intron_retention	FALSE	canonical	3	48	junction_8	47.7534821947928	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTTAGTATGATGGTG	NA	False	NA	-9	True	GATAAA	-14	NA	55718526	55687133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55704039_55712332_55712394_55717517
ES.9316.71	chr13	-	5877	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	18	-3	intron_retention	FALSE	canonical	3	21	junction_5	53.4864468814297	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTTAGTATGATGGT	NA	False	NA	-10	True	GATAAA	-13	NA	55718895	55687134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55704039_55712332_55712394_55717517
ES.9316.72	chr13	-	3803	10	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	51.3624256186572	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAGTTAGTATGATGG	NA	False	NA	-11	True	GATAAA	-12	NA	55718883	55687135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
ES.9316.74	chr13	-	3052	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-100	-11	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	57.3237867636605	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGGACACAGAGTTAGT	NA	False	NA	-18	True	GATAAA	-5	NA	55717871	55687142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55700904_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ES.9316.75	chr13	-	1621	4	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	87	13127	87	2521	5prime_fragment	FALSE	canonical	3	32	junction_3	20.8539897594894	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGTAATATCTTACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	55718826	55700255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55701163_55702029_55702262_55703795_55704039_55718587
ES.9316.76	chr13	-	3075	2	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	14711	13132	2519	2516	intron_retention	FALSE	canonical	3	81	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATCCTTGTAATATCT	NA	False	NA	NA	False	ATTAAA	-16	NA	55704202	55700260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_55701163_55702029
ES.9316.77	chr13	-	2306	5	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	33	2158	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28.6749019178793	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTTTTTTCATTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	55718880	55700618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55701163_55702029_55702262_55703932_55704039_55712332_55712394_55717517
ES.9316.78	chr13	-	3954	1	FSM	ENSMUSG00000021495.11	ENSMUST00000225262.2	3945	1	-3257	3248	-3257	-3248	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAGAAAATACCTAGC	NA	False	NA	NA	False	NA	NA	NA	55709978	55706024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_55706000_55710000
ES.9316.8	chr13	-	3238	11	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	58.2817295556678	285	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718947	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517_55717711_55718587
ES.9316.9	chr13	-	4218	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	52.6392333615231	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718871	55687128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55717517
ES.9317.1	chr13	+	104	1	Intergenic	novelGene_7617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTTTGCTGCGAACTT	4303	False	NA	NA	False	ATTAAA	-17	NA	55719070	55719174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55719100_55719200
ES.9318.1	chr13	+	1482	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-62	0	-51	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740919	55745510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ES.9318.10	chr13	+	3073	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-21	2	intron_retention	FALSE	canonical	3	87	junction_3	9.49670995661129	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGCAAGGAACTGGACT	NA	False	NA	8	True	AATAAA	-21	NA	55747856	55758258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751832_55752196_55755009_55756239_55756510_55756616_55757031
ES.9318.11	chr13	+	2047	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747860	55758255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9318.12	chr13	+	1580	4	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-11	-251	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	50.1353722989623	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAATATGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	55747866	55758004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751832_55752196_55756510_55756616_55757031
ES.9318.13	chr13	+	1821	4	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	-3	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	50.1353722989623	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACACTGGCAAGGAACT	NA	False	NA	3	True	AATAAA	-16	NA	55747874	55758253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751832_55752196_55756510_55756616_55757031
ES.9318.14	chr13	+	2291	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-2	-159	-2	158	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTGTCTCTGACGTG	NA	False	NA	NA	False	NA	NA	NA	55747875	55758414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9318.15	chr13	+	2948	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	1	0	intron_retention	FALSE	canonical	3	17	junction_1	35.4356811702555	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747878	55758255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751932_55752196_55755009_55756239_55756510_55756616_55757031
ES.9318.16	chr13	+	3638	3	FSM	ENSMUSG00000021504.15	ENSMUST00000142654.8	1213	3	1	-2426	1	1	multi-exon	FALSE	canonical	3	17	junction_1	36.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGCAAGGAACTGGAC	NA	False	NA	7	True	AATAAA	-20	NA	55747878	55758257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55748006_55751932_55752196_55755009
ES.9318.17	chr13	+	5588	5	NNC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	6	1	intron_retention	FALSE	canonical	0	0	junction_2	46.4293818610586	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGCAAGGAACTGGAC	NA	False	NA	7	True	AATAAA	-20	NA	55747883	55758257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55748006_55751932_55753679_55753849_55756239_55756510_55756616_55757031
ES.9318.18	chr13	+	2495	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	13	477	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGATGTTCTGGTCAAGC	NA	False	NA	NA	False	NA	NA	NA	55747890	55758733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9318.19	chr13	+	1931	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	46.6924779809339	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747892	55758255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756510_55756616_55757031
ES.9318.2	chr13	+	2528	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	-14	-1094	-3	1094	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55740967	55746604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ES.9318.20	chr13	+	1861	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	18	251	18	-251	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAATATGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	55747895	55758004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9318.21	chr13	+	6834	4	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	42	0	intron_retention	FALSE	canonical	3	87	junction_2	10.6770782520313	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747919	55758255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55752196_55755009_55756239_55756510_55756616_55757031
ES.9318.22	chr13	+	1446	2	ISM	ENSMUSG00000021504.15	ENSMUST00000100764.10	2195	5	8308	1	8139	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55756016	55758255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55756239_55757031
ES.9318.23	chr13	+	1380	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	4	-2	4	2	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAAGTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	55770821	55780226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ES.9318.25	chr13	+	2296	4	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.4916323558806	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATAGAAGTCTGTACAT	NA	False	NA	NA	False	AATAAA	-20	NA	55770822	55780223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55771070_55771603_55772985_55776389_55776456_55779621
ES.9318.26	chr13	+	3751	3	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	6	2729	intron_retention	TRUE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGCTTTGGGCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	55770823	55775790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55773578_55774514_55775323_55775601
ES.9318.27	chr13	+	3154	4	NNC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	62	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	42.4970587217516	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAAGTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	55770879	55780226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55771070_55772523_55774201_55775773_55776456_55779621
ES.9318.28	chr13	+	209	1	Intergenic	novelGene_7619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATCTGAGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	55778207	55778416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55778200_55778400
ES.9318.3	chr13	+	2671	3	NIC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	-5	0	intron_retention	FALSE	canonical	3	640	junction_2	7	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740976	55745510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55742644_55743280_55743428_55744653
ES.9318.4	chr13	+	1565	4	ISM	ENSMUSG00000058569.9	ENSMUST00000224741.2	1450	6	19435	-10	-2	0	3prime_fragment	FALSE	canonical	3	640	junction_3	26.5497436689865	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740979	55745510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55741415_55742517_55742644_55743280_55743428_55744653
ES.9318.5	chr13	+	1476	6	NNC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	-2	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	323.177722004472	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAGAAAAAAGAAA	NA	False	NA	NA	False	AATGAA	-26	NA	55740979	55745476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744336_55744425_55744653
ES.9318.6	chr13	+	3161	3	NIC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	-1	0	intron_retention	FALSE	canonical	3	616	junction_1	12	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740980	55745510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55741171_55741313_55743428_55744653
ES.9318.7	chr13	+	1426	6	NNC	ENSMUSG00000058569.9	novel	1420	5	NA	NA	1	31462	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	262.704092088418	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACAAACCTTAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	55740982	55776972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653_55745494_55776948
ES.9318.8	chr13	+	2158	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-26	-2	-26	1	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGGCAAGGAACTGGAC	NA	False	NA	7	True	AATAAA	-20	NA	55747851	55758257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9318.9	chr13	+	1659	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	-25	496	-25	-496	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGAGTACGCTGTAGC	NA	False	NA	NA	False	NA	NA	NA	55747852	55757759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ES.9319.1	chr13	-	2289	1	NIC	ENSMUSG00000086506.2	novel	809	3	NA	NA	311	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGGCATGGATCGGAC	NA	False	NA	NA	False	AATAAA	-18	NA	55752285	55749996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_55750000_55752300
ES.932.1	chr1	+	175	1	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTAAGATGTC	1601	False	NA	NA	False	NA	NA	NA	87022107	87022282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87022100_87022300
ES.9320.1	chr13	-	242	1	Intergenic	novelGene_7618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8911	False	NA	NA	False	NA	NA	NA	55775595	55775353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55775400_55775600
ES.9321.1	chr13	+	3491	24	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-711	-2120	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.360592454409	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAATTGTGGTGTGCTC	NA	False	NA	29	True	AATAAA	-38	NA	55782128	55826949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55782169_55782944_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.10	chr13	+	5714	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-27	-11	-27	11	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCTTTCCTTGAATGCT	NA	False	NA	19	True	AATAAA	-26	NA	55782812	55829080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.100	chr13	+	4728	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-13	54627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	116.5	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATACGATGCGTTT	NA	False	NA	NA	False	NA	NA	NA	55840923	55905940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55851313_55905876
ES.9321.101	chr13	+	2201	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	-8	2459	-8	-2459	multi-exon	FALSE	canonical	3	233	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTACTGAACTTAAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	55840928	55848854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55841161_55846885
ES.9321.103	chr13	+	4483	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-5	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	116.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840931	55851313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848038_55848211
ES.9321.105	chr13	+	4514	4	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	3	54627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.83725334431	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATACGATGCGTTT	NA	False	NA	NA	False	NA	NA	NA	55840939	55905940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848027_55848200_55851314_55905901
ES.9321.108	chr13	+	5640	2	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	4562	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTACTACTTTATTT	NA	False	NA	18	True	AATAAA	-18	NA	55845498	55851312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55848027_55848200
ES.9321.11	chr13	+	3590	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-27	2113	-27	-2113	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGTGCTCATCACCT	NA	False	NA	36	True	AATAAA	-45	NA	55782812	55826956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.110	chr13	+	159	1	Intergenic	novelGene_7624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCAAACAAG	NA	False	NA	NA	False	NA	NA	NA	55859412	55859571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55859400_55859600
ES.9321.111	chr13	+	1473	1	Genic_Genomic	ENSMUSG00000021497.11	novel	NA	NA	NA	NA	-49	-5053	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATATATGGAATAGTTG	NA	False	NA	NA	False	NA	NA	NA	55862413	55863886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_55862400_55863900
ES.9321.112	chr13	+	1548	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	-18	-3	-18	3	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTTCGCTTGTTTC	NA	False	NA	21	True	AATAAA	-17	NA	55862444	55874043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
ES.9321.113	chr13	+	1477	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	42	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.534912118047	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAAAGTGGTTTCGCTT	NA	False	NA	16	True	AATAAA	-12	NA	55862504	55874038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55862658_55865610_55866081_55869391_55869556_55872320_55872452_55873479
ES.9321.114	chr13	+	4797	4	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	44	3	intron_retention	FALSE	canonical	3	246	junction_1	10.2089285540757	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGTTTCGCTTGTTTC	NA	False	NA	21	True	AATAAA	-17	NA	55862506	55874043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55862658_55865604_55869556_55872320_55872452_55873479
ES.9321.115	chr13	+	1231	6	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	44	31900	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	126.075215645265	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATACGATGCGTTT	NA	False	NA	NA	False	NA	NA	NA	55862506	55905940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55862658_55865894_55866081_55869391_55869556_55872320_55872452_55873479_55874040_55905901
ES.9321.116	chr13	+	4408	4	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	66	0	intron_retention	FALSE	canonical	3	237	junction_1	14.4299072146089	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	False	NA	18	True	AATAAA	-14	NA	55862528	55874040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55866081_55869391_55869556_55872320_55872452_55873479
ES.9321.117	chr13	+	1389	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	111.778799420999	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	False	NA	18	True	AATAAA	-14	NA	55862531	55874040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55862658_55865604_55866012_55869391_55869556_55872320_55872452_55873479
ES.9321.118	chr13	+	529	2	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	72	-5660	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTGGATTCATTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	55862534	55863279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55862658_55862873
ES.9321.119	chr13	+	558	1	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	7825	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTCAAAGTGGTTTC	NA	False	NA	12	True	AATAAA	-8	NA	55873476	55874034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55873500_55874000
ES.9321.120	chr13	+	754	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	-149	-59	-149	59	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAAAATGTGGTGT	NA	False	NA	74	True	GATAAA	-17	NA	55875031	55924702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ES.9321.121	chr13	+	474	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-111	-36249	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTAATTTGCTTTTA	NA	False	NA	31	True	ATTAAA	-37	NA	55875069	55888392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55875288_55880748_55880881_55888268
ES.9321.122	chr13	+	754	4	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.642765678832	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTTATTTGTCAT	NA	False	NA	13	True	AATACA	-16	NA	55875071	55924641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55875288_55880748_55880881_55923179_55923261_55924316
ES.9321.123	chr13	+	421	3	NIC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-15	-6	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	152	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAAGCCTGAGTTATT	NA	False	NA	7	True	AATACA	-10	NA	55875165	55924635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55875288_55923179_55923261_55924417
ES.9321.124	chr13	+	4744	1	Genic_Genomic	ENSMUSG00000021496.13	novel	NA	NA	NA	NA	-4	-44721	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	55875176	55879920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_55875200_55879900
ES.9321.125	chr13	+	505	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	-1	-28739	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	196.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGTGATTGTGTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	55875179	55895902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55875288_55880748_55880881_55895637
ES.9321.126	chr13	+	596	5	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	177.800977218912	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGAGTTATTTGTCA	NA	False	NA	12	True	AATACA	-15	NA	55875180	55924640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55875288_55880748_55880881_55881569_55881623_55923179_55923261_55924417
ES.9321.127	chr13	+	135	1	Intergenic	novelGene_7626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	435	False	NA	NA	False	NA	NA	NA	55905734	55905869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55905700_55905900
ES.9321.128	chr13	+	206	1	Intergenic	novelGene_7627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTGAACAAGGAGAATCA	1327	False	NA	NA	False	NA	NA	NA	55906626	55906832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55906600_55906800
ES.9321.129	chr13	+	208	2	Intergenic	novelGene_7628	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAATTAAAAAAAAA	1328	False	NA	NA	False	NA	NA	NA	55906627	55922029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55906686_55921879
ES.9321.13	chr13	+	3453	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-23	2246	-23	-2246	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGATGTTCTTCAATG	NA	False	NA	-97	True	NA	NA	NA	55782816	55826823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.130	chr13	+	157	1	Intergenic	novelGene_7629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATGAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55916678	55916835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55916700_55916800
ES.9321.131	chr13	+	180	1	Intergenic	novelGene_7630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	55921820	55922000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55921800_55922000
ES.9321.132	chr13	+	967	1	NIC	ENSMUSG00000021496.13	novel	544	4	NA	NA	48492	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCCTGAGTTATTTGTC	NA	False	NA	11	True	AATACA	-14	NA	55923672	55924639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55923700_55924600
ES.9321.15	chr13	+	6073	21	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-20	-1996	intron_retention	FALSE	canonical	1	1	junction_10	101.370249580437	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGGCTCAGAGTTTTT	NA	False	NA	11	True	NA	NA	NA	55782819	55827073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55802873_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.16	chr13	+	3790	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-20	-1903	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782819	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.2	chr13	+	5424	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-33	-1903	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782806	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.21	chr13	+	6239	21	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-19	-1903	intron_retention	FALSE	non_canonical	0	0	junction_17	85.3343277936845	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782820	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.22	chr13	+	7064	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-17	0	intron_retention	FALSE	non_canonical	0	0	junction_19	105.856209974109	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782822	55829069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.24	chr13	+	5176	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-17	-2135	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGTCCTTTCAGTGG	NA	False	NA	14	True	AATAAA	-23	NA	55782822	55826934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.25	chr13	+	3827	24	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	-17	9	intron_retention	FALSE	non_canonical	0	0	junction_19	105.360592454409	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATCTTTCCTTGAATG	NA	False	NA	17	True	AATAAA	-24	NA	55782822	55829078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596_55826700_55828574
ES.9321.26	chr13	+	6181	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-17	-1130	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTTACATTTCAG	NA	False	NA	NA	False	AATAAA	-34	NA	55782822	55827939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.27	chr13	+	3664	24	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	-14	-2143	intron_retention	FALSE	non_canonical	0	0	junction_20	121.421230894392	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCCACTGACCTGTCCT	NA	False	NA	6	True	AATAAA	-15	NA	55782825	55826926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.30	chr13	+	3618	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-14	-1992	intron_retention	FALSE	non_canonical	0	0	junction_13	107.346815709527	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGAGTTTTTATTT	NA	False	NA	15	True	NA	NA	NA	55782825	55827077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808572_55811070_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.31	chr13	+	5617	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-14	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	107.045406292211	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCATTGTCTCAGATTATC	NA	False	NA	5	True	AATAAA	-12	NA	55782825	55829066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55785993_55787638_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.32	chr13	+	6443	22	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-12	0	intron_retention	FALSE	non_canonical	0	0	junction_11	129.517384294415	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782827	55829069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55802873_55806832_55806909_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.33	chr13	+	5156	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-12	-1903	intron_retention	FALSE	non_canonical	0	0	junction_19	105.856209974109	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782827	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.34	chr13	+	3424	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-12	-2135	intron_retention	FALSE	non_canonical	0	0	junction_9	107.644079883124	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCTGTCCTTTCAGTGG	NA	False	NA	14	True	AATAAA	-23	NA	55782827	55826934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801945_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.36	chr13	+	5986	21	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2148	intron_retention	FALSE	non_canonical	0	0	junction_17	85.3343277936845	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAAGGGCCACTGACCT	NA	False	NA	1	True	AATAAA	-10	NA	55782828	55826921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.38	chr13	+	4917	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2141	intron_retention	FALSE	non_canonical	0	0	junction_19	105.856209974109	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCACTGACCTGTCCTTT	NA	False	NA	8	True	AATAAA	-17	NA	55782828	55826928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.39	chr13	+	5091	22	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2143	intron_retention	FALSE	non_canonical	0	0	junction_18	109.938902842791	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCCACTGACCTGTCCT	NA	False	NA	6	True	AATAAA	-15	NA	55782828	55826926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802873_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.40	chr13	+	5670	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2	intron_retention	FALSE	non_canonical	0	0	junction_1	107.722027106655	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGTCTCAGATTATCT	NA	False	NA	6	True	AATAAA	-13	NA	55782828	55829067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55782994_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.41	chr13	+	3572	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2116	intron_retention	FALSE	non_canonical	0	0	junction_19	122.751655826976	564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTGGTGTGCTCATCA	NA	False	NA	33	True	AATAAA	-42	NA	55782828	55826953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799859_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823932_55824582_55824728_55825333_55825408_55826596
ES.9321.42	chr13	+	5427	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	0	intron_retention	FALSE	canonical	0	0	junction_22	96.8446080025809	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782828	55829069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596_55826700_55828574
ES.9321.44	chr13	+	4750	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-11	-2308	intron_retention	FALSE	non_canonical	0	0	junction_19	105.856209974109	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCGTCTGTAAGTACTA	NA	False	NA	NA	False	AATACA	-21	NA	55782828	55826761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.46	chr13	+	4121	29	Fusion	ENSMUSG00000021500.18_ENSMUSG00000021497.11	novel	5612	24	NA	NA	-11	13	intron_retention	FALSE	non_canonical	0	0	junction_24	157.670138101606	1056	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAACCATAGCATCTG	NA	False	NA	NA	False	NA	NA	NA	55782828	55868952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596_55827080_55829460_55829508_55833403_55833461_55838440_55838527_55859159_55859255_55868927
ES.9321.47	chr13	+	3328	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-11	2359	-11	-2359	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGTCTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	55782828	55826710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.5	chr13	+	3802	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-29	1903	-29	-1903	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	NA	False	NA	15	True	ATTAAA	-20	NA	55782810	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.51	chr13	+	4029	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-3	1650	-3	-1650	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCCCTCAAGTGTTTC	NA	False	NA	NA	False	AATACA	-14	NA	55782836	55827419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.52	chr13	+	4521	24	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	-3	-1131	intron_retention	FALSE	canonical	0	0	junction_11	115.656472623608	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGGTATTTACATTTCA	NA	False	NA	NA	False	AATAAA	-33	NA	55782836	55827938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802873_55802987_55803035_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.53	chr13	+	5841	25	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	-2	-2	intron_retention	FALSE	non_canonical	0	0	junction_13	134.623181665219	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGTCTCAGATTATCT	NA	False	NA	6	True	AATAAA	-13	NA	55782837	55829067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55807360_55807409_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.54	chr13	+	4985	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-1	-2310	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGTCGTCTGTAAGTAC	NA	False	NA	NA	False	AATACA	-19	NA	55782838	55826759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.55	chr13	+	3726	24	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	0	-1	intron_retention	FALSE	canonical	0	0	junction_23	115.539893191549	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTCTCAGATTATCTT	NA	False	NA	7	True	AATAAA	-14	NA	55782839	55829068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802873_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596_55826700_55828574
ES.9321.6	chr13	+	3915	24	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	-28	-1904	intron_retention	FALSE	non_canonical	0	0	junction_8	136.680411806684	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCATTTCTTTTTTA	NA	False	NA	14	True	ATTAAA	-19	NA	55782811	55827165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801416_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.60	chr13	+	3530	24	NNC	ENSMUSG00000021500.18	novel	5612	24	NA	NA	3	-2259	intron_retention	FALSE	non_canonical	0	0	junction_20	121.421230894392	561	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGTTTTCAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	55782843	55826810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.63	chr13	+	3363	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	3	-2146	intron_retention	FALSE	non_canonical	0	0	junction_13	150.332881322123	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGCCACTGACCTGT	NA	False	NA	3	True	AATAAA	-12	NA	55782843	55826923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55807360_55807409_55808165_55808283_55808529_55808613_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.65	chr13	+	6542	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	3	-2	intron_retention	FALSE	canonical	1	1	junction_10	132.123064346205	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGTCTCAGATTATCT	NA	False	NA	6	True	AATAAA	-13	NA	55782843	55829067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55802873_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.67	chr13	+	3371	22	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	3088	-1903	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	109.974455908547	565	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCATTTCTTTTTTAT	1334	False	NA	15	True	ATTAAA	-20	NA	55785951	55827166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55786028_55787603_55787748_55793183_55793281_55795439_55795542_55798283_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.68	chr13	+	3174	21	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	4738	2146	4738	-2146	3prime_fragment	FALSE	non_canonical	0	0	junction_17	85.206220430201	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGCCACTGACCTGT	2984	False	NA	3	True	AATAAA	-12	NA	55787601	55826923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.69	chr13	+	4025	20	ISM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	10318	1151	10318	-1151	3prime_fragment	FALSE	non_canonical	0	0	junction_16	87.3170108730918	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAATTACATCAA	8564	False	NA	NA	False	AATAAA	-13	NA	55793181	55827918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.7	chr13	+	4593	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	-28	1111	-28	-1111	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACAGCATTTCTTAGTA	NA	False	NA	NA	False	AATAAA	-34	NA	55782811	55827958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.70	chr13	+	5075	19	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	12575	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	117.229238863197	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTCTCAGATTATCTT	NA	False	NA	7	True	AATAAA	-14	NA	55795438	55829068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801416_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.71	chr13	+	2929	19	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	12575	-2146	combination_of_known_junctions	FALSE	canonical	3	86	junction_15	71.9368936406533	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGCCACTGACCTGT	NA	False	NA	3	True	AATAAA	-12	NA	55795438	55826923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.73	chr13	+	4389	17	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	15363	-2141	intron_retention	FALSE	non_canonical	0	0	junction_13	94.212194009056	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCACTGACCTGTCCTTT	NA	False	NA	8	True	AATAAA	-17	NA	55798226	55826928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.77	chr13	+	2772	20	Fusion	ENSMUSG00000021500.18_ENSMUSG00000021497.11	novel	5676	23	NA	NA	-16841	13	multi-exon	FALSE	non_canonical	0	0	junction_12	160.090071600118	1056	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAACCATAGCATCTG	NA	False	NA	NA	False	NA	NA	NA	55800735	55868952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596_55826930_55833403_55833461_55838440_55838527_55859145_55859255_55868927
ES.9321.79	chr13	+	3433	16	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-16132	-1133	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	145.640867280521	567	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTGGTATTTACATTT	NA	False	NA	NA	False	AATAAA	-31	NA	55801444	55827936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808165_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.8	chr13	+	7266	22	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-28	15	intron_retention	FALSE	non_canonical	0	0	junction_18	109.938902842791	569	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCTTGAATGCTTTGT	NA	False	NA	23	True	AATAAA	-30	NA	55782811	55829084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802873_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.80	chr13	+	4290	13	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-15638	-2146	intron_retention	FALSE	non_canonical	0	0	junction_9	138.718239608207	563	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGCCACTGACCTGT	NA	False	NA	3	True	AATAAA	-12	NA	55801938	55826923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.81	chr13	+	9031	11	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-10719	0	intron_retention	TRUE	non_canonical	0	0	junction_6	149.604278013699	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55806857	55829069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818811_55819019_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.84	chr13	+	3729	9	NIC	ENSMUSG00000021500.18	novel	5664	22	NA	NA	-5986	-2	combination_of_known_junctions	FALSE	canonical	3	86	junction_5	99.9029998298349	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGTCTCAGATTATCT	NA	False	NA	6	True	AATAAA	-13	NA	55811590	55829067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.85	chr13	+	3568	8	NIC	ENSMUSG00000021500.18	novel	5664	22	NA	NA	-3579	-1	combination_of_known_junctions	FALSE	canonical	3	86	junction_4	106.490777602033	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTCTCAGATTATCTT	NA	False	NA	7	True	AATAAA	-14	NA	55813997	55829068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.86	chr13	+	176	1	Intergenic	novelGene_7620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55818815	55818991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55818800_55819000
ES.9321.87	chr13	+	2819	1	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	6536	-2138	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	543	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGACCTGTCCTTTCAG	NA	False	NA	11	True	AATAAA	-20	NA	55824112	55826931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55824100_55826900
ES.9321.88	chr13	+	416	1	Intergenic	novelGene_7621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAATAAAAAC	NA	False	NA	NA	False	NA	NA	NA	55838026	55838442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55838000_55838400
ES.9321.89	chr13	+	189	1	Intergenic	novelGene_7622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCAGGGGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	55838669	55838858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55838700_55838900
ES.9321.9	chr13	+	7321	22	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	-27	0	intron_retention	FALSE	non_canonical	0	0	junction_18	83.319971717919	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782812	55829069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ES.9321.90	chr13	+	4697	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	-43	-2	-43	2	multi-exon	FALSE	canonical	3	233	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTACTACTTTATTTTTT	NA	False	NA	21	True	AATAAA	-21	NA	55840893	55851315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_55841161_55846885
ES.9321.91	chr13	+	4520	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840894	55851313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848027_55848200
ES.9321.92	chr13	+	2958	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-25	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	116	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTACTACTTTATTT	NA	False	NA	18	True	AATAAA	-18	NA	55840911	55851312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55847316_55849033
ES.9321.93	chr13	+	4496	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-23	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	116.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTCTGTACTACTTTAT	NA	False	NA	16	True	AATAAA	-16	NA	55840913	55851310	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848032_55848207
ES.9321.95	chr13	+	4495	2	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840913	55851313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55840981_55846885
ES.9321.97	chr13	+	3414	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-19	-1083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.5	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTATTCAAGTAAGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	55840917	55850230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848027_55848200
ES.9321.98	chr13	+	3659	4	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-17	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	109.83725334431	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTGTACTACTTTATT	NA	False	NA	17	True	AATAAA	-17	NA	55840919	55851311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55841161_55846885_55848027_55848200_55848429_55849262
ES.9321.99	chr13	+	4312	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840922	55851313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_55840981_55846885_55848027_55848200
ES.9322.1	chr13	-	1583	1	Antisense	novelGene_ENSMUSG00000021500.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTATTTTTGTTT	1300	False	NA	NA	False	NA	NA	NA	55783206	55781623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55781600_55783200
ES.9323.1	chr13	-	183	2	Antisense	novelGene_ENSMUSG00000045767.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	55855524	55839435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55839443_55855348
ES.9323.2	chr13	-	6932	1	Antisense	novelGene_ENSMUSG00000045767.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAGGAACAGGAG	NA	False	NA	NA	False	NA	NA	NA	55850983	55844051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_55844100_55851000
ES.9323.3	chr13	-	183	1	Intergenic	novelGene_7623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTGTATGACT	NA	False	NA	NA	False	NA	NA	NA	55855524	55855341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55855300_55855500
ES.9324.1	chr13	-	175	1	Intergenic	novelGene_7625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGAGAGAGATCT	NA	False	NA	NA	False	NA	NA	NA	55877014	55876839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_55876800_55877000
ES.9325.1	chr13	+	213	1	Intergenic	novelGene_7631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTCCAGCAGGAAGG	7588	False	NA	NA	False	AATGAA	-17	NA	55936919	55937132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_55936900_55937100
ES.9326.1	chr13	-	2208	4	NNC	ENSMUSG00000021506.8	novel	2451	3	NA	NA	157	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.62466929133727	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGAGCCCTAGCTGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	55979081	55972864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_55974425_55976252_55976489_55978584_55978822_55978906
ES.9327.1	chr13	+	3479	1	Intergenic	novelGene_7632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGTAAGTACCTGCA	1353	False	NA	NA	False	NA	NA	NA	56183151	56186630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56183200_56186600
ES.9328.1	chr13	+	179	1	Intergenic	novelGene_7633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	56207897	56208076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56207900_56208100
ES.9329.1	chr13	+	6163	4	Antisense	novelGene_ENSMUSG00000015937.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCGGGCAGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	56239299	56277202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_56244051_56252119_56252313_56252701_56252811_56276092
ES.933.1	chr1	-	163	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATGTGACTCTAG	NA	False	NA	NA	False	NA	NA	NA	87033330	87033167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87033200_87033300
ES.9330.1	chr13	-	2255	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	6	319	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTGTCTGCATTTGCT	6012	False	NA	NA	False	GATAAA	-18	NA	56283337	56221112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.10	chr13	-	1771	1	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	9128	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	NA	False	NA	-9	True	AGTAAA	-14	NA	56223206	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56221400_56223200
ES.9330.11	chr13	-	2053	10	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	512.619802317853	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	6077	False	NA	-9	True	AGTAAA	-14	NA	56283272	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56222297_56222484_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.14	chr13	-	1834	9	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	412.565676589801	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	6104	False	NA	-9	True	AGTAAA	-14	NA	56283245	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244039_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.15	chr13	-	1979	9	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-6885	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	439.635004861988	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	5327	False	NA	-9	True	AGTAAA	-14	NA	56291059	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56290836
ES.9330.16	chr13	-	1825	9	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	518.051743916571	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	6104	False	NA	-9	True	AGTAAA	-14	NA	56283245	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276100_56276295_56283162
ES.9330.18	chr13	-	1839	9	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	406.704418927309	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGACTGGCCGTGTTTTGT	6098	False	NA	-10	True	AGTAAA	-13	NA	56283251	56221436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232014_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.19	chr13	-	1697	8	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	34	-3	combination_of_known_splicesites	FALSE	canonical	1	15	junction_7	424.717336974288	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGACTGGCCGTGTTTTG	6040	False	NA	-11	True	AGTAAA	-12	NA	56283309	56221437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56283158
ES.9330.20	chr13	-	1847	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-266	-3	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	412.140885347474	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGACTGGCCGTGTTTTG	5639	False	NA	-11	True	AGTAAA	-12	NA	56283710	56221437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283614
ES.9330.23	chr13	-	1692	8	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-27	-84	combination_of_known_splicesites	FALSE	canonical	2	47	junction_3	415.030807806567	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACAACTGGATCTGT	6069	False	NA	-8	True	AATGAA	-8	NA	56283280	56221518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.24	chr13	-	1488	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	0	93	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	760	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTTTTTTTG	6006	False	NA	NA	False	NA	NA	NA	56283343	56221885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.25	chr13	-	1284	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	9	-12	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	758	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAG	6105	False	NA	NA	False	NA	NA	NA	56283244	56221990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.26	chr13	-	1725	1	Intergenic	novelGene_7634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATGAGTGGGAAGC	NA	False	NA	NA	False	AGTAAA	-8	NA	56228735	56227010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_56227000_56228700
ES.9330.27	chr13	-	7527	2	ISM	ENSMUSG00000015937.16	ENSMUST00000141589.2	600	4	1891	5381	1891	-5381	internal_fragment	FALSE	canonical	3	1322	junction_1	0	744	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGCCCTTTTCTTCT	NA	False	NA	NA	False	CATAAA	-18	NA	56235980	56227552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_56231108_56232008
ES.9330.28	chr13	-	1511	9	NNC	ENSMUSG00000015937.16	novel	4018	4	NA	NA	0	-7079	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	418.624066884598	750	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCGGCCCTAAGCTTTT	6096	False	NA	NA	False	NA	NA	NA	56283253	56229250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56229684_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.3	chr13	-	1999	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	49	5	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTTGTGTTACTGTGT	5954	False	NA	0	True	AGTAAA	-23	NA	56283395	56221426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.30	chr13	-	1402	8	ISM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	199	9172	8	-8432	5prime_fragment	FALSE	canonical	3	557	junction_4	249.322183169505	750	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAATGTCTAAACCTTT	6104	False	NA	NA	False	ATTAAA	-25	NA	56283245	56230603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.31	chr13	-	5439	5	NIC	ENSMUSG00000015937.16	novel	889	6	NA	NA	3	4071	intron_retention	FALSE	canonical	3	847	junction_1	169.851957598374	719	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACAGTGAGAAAGAGTTT	6009	False	NA	NA	False	AATACA	-16	NA	56283340	56239297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.4	chr13	-	7363	8	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-31	5	intron_retention	FALSE	canonical	3	557	junction_4	249.568443845101	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTTGTGTTACTGTGT	6065	False	NA	0	True	AGTAAA	-23	NA	56283284	56221426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.5	chr13	-	2333	10	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-177	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	518.128255250463	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCCGTGTTTTGTGTTA	5728	False	NA	-6	True	AGTAAA	-17	NA	56283621	56221432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56278380_56278492_56283158
ES.9330.7	chr13	-	1680	8	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	21134	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_7	452.461837380474	764	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	NA	False	NA	-8	True	AGTAAA	-15	NA	56261504	56221434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56261376
ES.9330.8	chr13	-	8173	8	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	34	-1	intron_retention	FALSE	canonical	3	557	junction_4	239.685423087881	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	6040	False	NA	-9	True	AGTAAA	-14	NA	56283309	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ES.9330.9	chr13	-	1932	9	NNC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	-173	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	413.689799245763	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	5732	False	NA	-9	True	AGTAAA	-14	NA	56283617	56221435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283438
ES.9331.1	chr13	+	183	1	Intergenic	novelGene_7635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGGAAAGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56315199	56315382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56315200_56315400
ES.9332.1	chr13	-	3456	3	FSM	ENSMUSG00000049625.7	ENSMUST00000225063.2	2718	3	36	-774	36	-5	multi-exon	FALSE	canonical	1	1	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGAGACATTCCTGGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	56326662	56321521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_56324447_56324717_56324946_56326359
ES.9333.1	chr13	+	179	1	Intergenic	novelGene_7636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGTTGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56348073	56348252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56348100_56348300
ES.9334.1	chr13	-	1678	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	145	4	-101	-4	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGTACTCCTGGGC	NA	False	NA	-2	True	AATAAA	-18	NA	56444219	56436459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
ES.9335.1	chr13	+	154	1	Intergenic	novelGene_7637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAACAAACAAA	2547	False	NA	NA	False	NA	NA	NA	56508450	56508604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56508400_56508600
ES.9336.1	chr13	+	2136	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-600	-2515	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5.67340285895511	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGATTAAAGCTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	56585567	56619537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
ES.9336.3	chr13	+	3726	10	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-570	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	7.67390962214756	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCGTGCATCTGTCTT	NA	False	NA	33	True	AATAAA	-23	NA	56585597	56622049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742_56620237_56620350
ES.9336.4	chr13	+	3380	10	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-568	-347	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	7.67390962214756	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTGTTTCTGTGTGAC	NA	False	NA	NA	False	AATAAA	-16	NA	56585599	56621705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742_56620237_56620350
ES.9336.5	chr13	+	2941	8	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-558	-2339	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.75343730445779	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCAATGTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	56585609	56619713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162
ES.9336.6	chr13	+	3266	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-7	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	7.40671148351277	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCGTGCATCTGTCTT	NA	False	NA	33	True	AATAAA	-23	NA	56586160	56622049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56619742_56620247_56620358
ES.9337.1	chr13	+	161	1	Intergenic	novelGene_7638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAATAAATCTTTTTA	8064	False	NA	NA	False	NA	NA	NA	56622328	56622489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56622300_56622500
ES.9338.1	chr13	+	881	3	FSM	ENSMUSG00000035509.18	ENSMUST00000121095.8	798	3	-89	6	-89	-6	multi-exon	FALSE	canonical	2	6	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCAGTTTCTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	56670195	56675274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56670436_56671322_56671417_56674727
ES.9338.2	chr13	+	888	4	FSM	ENSMUSG00000035509.18	ENSMUST00000124981.2	3507	4	-4	2623	1	-4	multi-exon	FALSE	canonical	2	8	junction_3	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAGTTTCTCACTGG	NA	False	NA	NA	False	AATAAA	-22	NA	56670321	56675276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727
ES.9338.3	chr13	+	2109	7	FSM	ENSMUSG00000035509.18	ENSMUST00000045428.7	1965	7	13	-157	8	45	multi-exon	FALSE	canonical	1	1	junction_5	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTAGCATCTTGTG	NA	False	NA	NA	False	NA	NA	NA	56670333	56685756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56670436_56671322_56671417_56673454_56673586_56674727_56675095_56675530_56675654_56680105_56680278_56684636
ES.9339.1	chr13	+	2807	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	-94	1	-31	-1	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9331	False	NA	NA	False	AATAAA	-15	NA	56757304	56787170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ES.9339.2	chr13	+	2551	16	NIC	ENSMUSG00000035493.11	novel	2714	17	NA	NA	-20	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	16.7915322575266	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAACCAAAGAAAC	9403	False	NA	NA	False	NA	NA	NA	56757376	56787147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ES.9339.3	chr13	+	2633	18	NNC	ENSMUSG00000035493.11	novel	2714	17	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_17	15.1627845266652	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	9423	False	NA	NA	False	AATAAA	-15	NA	56757396	56787170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529_56786716_56786797
ES.9339.4	chr13	+	2698	17	NNC	ENSMUSG00000035493.11	novel	2714	17	NA	NA	1	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	21.0177566298118	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAAACCAAAGAAAC	9426	False	NA	NA	False	NA	NA	NA	56757399	56787147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778349_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783376_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ES.9339.5	chr13	+	3725	15	NIC	ENSMUSG00000035493.11	novel	3003	17	NA	NA	2	-4	intron_retention	FALSE	canonical	3	51	junction_1	6.17805530461963	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACCTGTGTGCTAGCTG	9427	False	NA	NA	False	AATAAA	-12	NA	56757400	56787167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56785031_56785833_56785859_56786529
ES.9339.6	chr13	+	2522	15	NIC	ENSMUSG00000035493.11	novel	3003	17	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	16.1764820473603	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACCTGTGTGCTAGC	9428	False	NA	NA	False	AATAAA	-10	NA	56757401	56787165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56785833_56785859_56786529
ES.9339.7	chr13	+	3855	16	ISM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	3317	1	3317	-1	3prime_fragment	FALSE	canonical	3	54	junction_3	6.0736223860962	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTGTGCTAGCTGCGT	NA	False	NA	NA	False	AATAAA	-15	NA	56760715	56787170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ES.934.1	chr1	-	307	2	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCTGCATGCCAT	NA	False	NA	NA	False	NA	NA	NA	87058614	87058063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87058138_87058381
ES.934.2	chr1	-	391	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	87058613	87058222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87058200_87058600
ES.934.3	chr1	-	158	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAATAATAAAT	NA	False	NA	NA	False	NA	NA	NA	87058615	87058457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87058500_87058600
ES.9340.1	chr13	+	3382	3	Intergenic	novelGene_7639	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTGGTGTGGCCCCT	NA	False	NA	NA	False	ATTAAA	-18	NA	56835462	56847257	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_56835582_56837432_56837511_56844072
ES.9340.10	chr13	+	4918	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	87	1579	31	494	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTTTGCTTCCTAAAG	NA	False	NA	NA	False	NA	NA	NA	56850909	56888611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.11	chr13	+	1753	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	98	4733	42	-1349	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTGATTAACTTT	NA	False	NA	NA	False	NA	NA	NA	56850920	56885457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.12	chr13	+	1928	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	100	4556	44	-1172	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACATATATTGTGGA	NA	False	NA	NA	False	AATGAA	-13	NA	56850922	56885634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.13	chr13	+	6529	8	NNC	ENSMUSG00000021540.17	novel	6584	7	NA	NA	47	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3456005113189	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACAGTGTCTTTGTTT	NA	False	NA	7	True	AATAAA	-11	NA	56850925	56890184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56850945_56853888_56853943_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.14	chr13	+	6456	7	NNC	ENSMUSG00000021540.17	novel	4570	7	NA	NA	-260	-6	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	35.3965629216548	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACAGTGTCTTTGTTT	NA	False	NA	7	True	AATAAA	-11	NA	56851220	56890184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56851390_56871241_56871810_56875385_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.15	chr13	+	1989	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	364	2217	-252	-1250	multi-exon	FALSE	canonical	3	10	junction_1	28.5856413062378	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTGTCCCAACGTTTT	NA	False	NA	NA	False	NA	NA	NA	56851228	56885556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.16	chr13	+	5042	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	366	-838	-250	494	multi-exon	FALSE	canonical	3	10	junction_1	28.5856413062378	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTCTTTGCTTCCTAAAG	NA	False	NA	NA	False	NA	NA	NA	56851230	56888611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.17	chr13	+	8164	7	NNC	ENSMUSG00000021540.17	novel	4534	7	NA	NA	-104	-5	intron_retention	FALSE	canonical	0	0	junction_1	41.0950794567373	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACAGTGTCTTTGTTTA	NA	False	NA	8	True	AATAAA	-12	NA	56851376	56890185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56851636_56871241_56871810_56875216_56875469_56876322_56876443_56880002_56880173_56880662_56880885_56883612
ES.9340.18	chr13	+	2312	6	ISM	ENSMUSG00000021540.17	ENSMUST00000109874.2	4534	7	19759	2079	-9590	-768	3prime_fragment	FALSE	canonical	3	56	junction_4	14.3303872941383	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCCTGTGCATTAATC	NA	False	NA	NA	False	NA	NA	NA	56871239	56886038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.2	chr13	+	6628	8	NNC	ENSMUSG00000021540.17	novel	572	3	NA	NA	-15332	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3456005113189	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTTGTTTATTTTCT	NA	False	NA	14	True	AATAAA	-18	NA	56835490	56890191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56835582_56837436_56837511_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.3	chr13	+	6578	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	8	-2	8	2	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTGTTTATTTTCTT	NA	False	NA	15	True	AATAAA	-19	NA	56850830	56890192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.4	chr13	+	1429	6	NNC	ENSMUSG00000021540.17	novel	1385	6	NA	NA	-5	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	40.3256742039113	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATACAACTAGTC	NA	False	NA	NA	False	ATTAAA	-11	NA	56850846	56881019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56876526_56876561_56880662
ES.9340.5	chr13	+	6348	7	NNC	ENSMUSG00000021540.17	novel	6584	7	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	29.6348143611905	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCTTTGTTTATTTT	NA	False	NA	12	True	AATAAA	-16	NA	56850888	56890189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56850945_56871241_56871810_56875385_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ES.9340.6	chr13	+	4765	4	NIC	ENSMUSG00000021540.17	novel	1398	5	NA	NA	12	-1	intron_retention	FALSE	canonical	3	51	junction_1	20.154955277108	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAACTAGTCTTCTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	56850890	56881026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_56850945_56871241_56875469_56876322_56876443_56880662
ES.9340.7	chr13	+	6430	3	ISM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	41	1	14	-1	intron_retention	FALSE	canonical	3	51	junction_1	14.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAACTAGTCTTCTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	56850892	56881026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_56850945_56871241_56871810_56875216
ES.9340.8	chr13	+	6514	7	NNC	ENSMUSG00000021540.17	novel	6584	7	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	32.2046407973896	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTCTTTGTTTAT	NA	False	NA	9	True	AATAAA	-13	NA	56850903	56890186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885132
ES.9340.9	chr13	+	1332	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	58	8	31	-8	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATACAACTAGTC	NA	False	NA	NA	False	ATTAAA	-11	NA	56850909	56881019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
ES.9341.1	chr13	-	1233	1	Intergenic	novelGene_7640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGGGAATTAGAGAGTC	NA	False	NA	NA	False	NA	NA	NA	56855580	56854347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_56854300_56855600
ES.9342.1	chr13	-	156	1	Intergenic	novelGene_7641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATAAATCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	56912438	56912282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_56912300_56912400
ES.9343.1	chr13	-	1843	7	ISM	ENSMUSG00000021541.15	ENSMUST00000173067.9	2022	8	77549	-649	77549	-2	3prime_fragment	FALSE	canonical	0	0	junction_4	2.21108319357027	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGAGCCTGGGGGTCT	NA	False	NA	NA	False	AATAAA	-7	NA	56958380	56920927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_56921747_56923929_56924006_56930323_56930405_56931435_56931658_56937414_56937611_56952325_56952591_56958196
ES.9344.1	chr13	-	706	2	Intergenic	novelGene_7642	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGCACTTGTTCTCTC	NA	False	NA	NA	False	AATAAA	-24	NA	57086187	57083705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_57084298_57086073
ES.9345.1	chr13	+	182	1	Intergenic	novelGene_7643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAAATGA	NA	False	NA	NA	False	NA	NA	NA	57528610	57528792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_57528600_57528800
ES.9346.1	chr13	-	1484	7	NNC	ENSMUSG00000056222.16	novel	1320	10	NA	NA	382837	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1.89296944860009	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTATCTGACTTCCTACA	NA	False	NA	NA	False	ATTAAA	-17	NA	57672564	57576594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_57577299_57578101_57578240_57583922_57583986_57588133_57588356_57592119_57592237_57660504_57660620_57672439
ES.9347.1	chr13	-	5374	1	Intergenic	novelGene_7644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCAAAACTGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	57932226	57926852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_57926900_57932200
ES.9348.1	chr13	-	2056	2	ISM	ENSMUSG00000014164.16	ENSMUST00000091583.6	6871	17	93025	3048	93025	-3048	3prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATTGTTTGTATTGGA	NA	False	NA	NA	False	ACTAAA	-14	NA	58157217	58151089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58153019_58157090
ES.9348.2	chr13	-	2795	8	NNC	ENSMUSG00000014164.16	novel	7149	15	NA	NA	78970	-3298	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.95875845725744	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTCATACGCCCATCT	NA	False	NA	NA	False	NA	NA	NA	58171272	58151339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58153019_58157090_58157235_58158907_58159049_58161643_58161773_58164259_58164362_58166610_58166809_58167182_58167301_58170988
ES.9349.1	chr13	+	3614	2	Antisense	novelGene_ENSMUSG00000014164.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATGTGGCCAAACCA	NA	False	NA	NA	False	NA	NA	NA	58171337	58175647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_58171531_58172226
ES.9349.2	chr13	+	4263	1	Intergenic	novelGene_7645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAATTAATTAAATGGA	NA	False	NA	NA	False	NA	NA	NA	58171371	58175634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58171400_58175600
ES.935.1	chr1	-	2902	18	FSM	ENSMUSG00000026247.14	ENSMUST00000160810.2	2898	18	2	-6	2	-1	multi-exon	FALSE	canonical	2	4	junction_8	3.05089470115057	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGGCCTCCAGACAAG	6042	False	NA	NA	False	AATAAA	-18	NA	87083885	87075377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083741
ES.935.2	chr1	-	3793	17	FSM	ENSMUSG00000026247.14	ENSMUST00000027463.11	2695	17	-1100	2	38	-2	multi-exon	FALSE	canonical	2	4	junction_8	3.11999599358717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGCCTTGGCCTCCAGA	6078	False	NA	NA	False	AATAAA	-14	NA	87083849	87075381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925
ES.935.3	chr1	-	3196	17	NIC	ENSMUSG00000026247.14	novel	2898	18	NA	NA	0	-2	intron_retention	FALSE	canonical	2	4	junction_7	3.07649861855974	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGCCTTGGCCTCCAGA	6040	False	NA	NA	False	AATAAA	-14	NA	87083887	87075381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083741
ES.9350.1	chr13	-	1861	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1483	-666	1483	666	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTTCTGTAAGC	814	False	NA	NA	False	NA	NA	NA	58274887	58273026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58273000_58274900
ES.9350.2	chr13	-	1570	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1499	-391	1499	391	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTTGCTTCCCTTAAA	830	False	NA	NA	False	AAAAAG	-23	NA	58274871	58273301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58273300_58274900
ES.9350.3	chr13	-	2677	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTGAGTGAGAGTAT	NA	False	NA	-6	True	AATAAA	-14	NA	58276370	58273693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58273700_58276400
ES.9350.4	chr13	-	2604	2	Genic_Genomic	ENSMUSG00000007836.7	novel	2678	1	NA	NA	5	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATTGAGTGAGAGTAT	NA	False	NA	-6	True	AATAAA	-14	NA	58276365	58273693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_58274868_58274935
ES.9350.5	chr13	-	442	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1532	704	1532	-704	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTGTTCTCATTCA	4	True	NA	-41	True	TTTAAA	-18	NA	58274838	58274396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58274400_58274800
ES.9350.6	chr13	-	1643	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	0	1035	0	-1035	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTAACATTTTTTTT	NA	False	NA	-8	True	AATAAA	-18	NA	58276370	58274727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58274700_58276400
ES.9350.7	chr13	-	1393	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	0	1285	0	-1285	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTCTTGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	58276370	58274977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58275000_58276400
ES.9351.1	chr13	-	165	1	Intergenic	novelGene_7646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATACCCAAATATGTCA	NA	False	NA	NA	False	NA	NA	NA	58295734	58295569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58295600_58295700
ES.9352.1	chr13	-	178	1	Intergenic	novelGene_7647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGTTTTCAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58302456	58302278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58302300_58302500
ES.9353.1	chr13	+	721	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	-4	745	1	2	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGCTGTACTGTAAATT	NA	False	NA	4	True	NA	NA	NA	58305463	58311762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
ES.9353.2	chr13	+	760	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	6	-2	1	2	multi-exon	FALSE	canonical	3	14	junction_4	87.5928079239386	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGCTGTACTGTAAATT	NA	False	NA	4	True	NA	NA	NA	58305468	58311762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
ES.9353.3	chr13	+	3905	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	11	-2018	6	2	multi-exon	FALSE	canonical	3	188	junction_1	4.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGCTGTACTGTAAATT	NA	False	NA	4	True	NA	NA	NA	58305473	58311762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58305551_58307690_58307722_58307965
ES.9353.4	chr13	+	1990	4	NNC	ENSMUSG00000050002.15	novel	1462	4	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	89.406686302287	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTCTTTATACTTTA	NA	False	NA	NA	False	NA	NA	NA	58305481	58312507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_58305551_58307690_58307722_58307965_58308595_58311246
ES.9353.5	chr13	+	1448	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	14	0	14	0	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTCTTTATACTTTA	NA	False	NA	NA	False	NA	NA	NA	58305481	58312507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
ES.9354.1	chr13	+	1585	1	Intergenic	novelGene_7648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGGATGCAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	58313769	58315354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58313800_58315400
ES.9354.2	chr13	+	173	1	Intergenic	novelGene_7649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGGGAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	58314852	58315025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58314900_58315000
ES.9355.1	chr13	+	2499	1	Intergenic	novelGene_7650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCTCATACCAAATATT	NA	False	NA	NA	False	NA	NA	NA	58358648	58361147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58358600_58361100
ES.9355.2	chr13	+	177	1	Intergenic	novelGene_7651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCAC	NA	False	NA	NA	False	NA	NA	NA	58359181	58359358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58359200_58359400
ES.9356.1	chr13	-	3995	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	-233	-76	-233	76	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTCTGTGAAAACTTAG	1494	False	NA	74	True	AAAACA	-14	NA	58363700	58323893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.11	chr13	-	7083	9	NIC	ENSMUSG00000005312.16	novel	3561	10	NA	NA	-7	2	intron_retention	FALSE	canonical	3	1271	junction_6	76.4930552403288	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTGTCTCGCCTCTT	1754	False	NA	-7	True	AATAAA	-15	NA	58363440	58323974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58325843_58327041_58327208_58327366_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.13	chr13	-	3636	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	437.775284820877	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTGTCTCGCCTCTT	1760	False	NA	-7	True	AATAAA	-15	NA	58363434	58323974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327196_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.15	chr13	-	3520	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	443.14282122133	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTGGTTGTCTCGCCTCT	1779	False	NA	-8	True	AATAAA	-14	NA	58363415	58323975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339643_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.16	chr13	-	3000	8	NIC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	508.568298545745	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1740	False	NA	-9	True	AATAAA	-13	NA	58363454	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58344370_58344487_58346732_58346885_58363097
ES.9356.17	chr13	-	3632	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	440.455911528044	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1765	False	NA	-9	True	AATAAA	-13	NA	58363429	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328711_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.18	chr13	-	3534	10	NNC	ENSMUSG00000005312.16	novel	3561	10	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	591.544953573915	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1784	False	NA	-9	True	AATAAA	-13	NA	58363410	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325837_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344489_58346732_58346885_58363097
ES.9356.19	chr13	-	6943	9	NIC	ENSMUSG00000005312.16	novel	3561	10	NA	NA	-6	0	intron_retention	FALSE	canonical	3	817	junction_3	206.594409411291	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1755	False	NA	-9	True	AATAAA	-13	NA	58363439	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58331139_58339535_58339780_58339890_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.20	chr13	-	3637	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	564.186361054572	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1761	False	NA	-9	True	AATAAA	-13	NA	58363433	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341071_58341327_58344370_58344487_58346732_58346885_58363097
ES.9356.21	chr13	-	3781	12	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	533.345065297961	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1737	False	NA	-9	True	AATAAA	-13	NA	58363457	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58345422_58345535_58346732_58346885_58363097
ES.9356.22	chr13	-	3664	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	443.14282122133	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1726	False	NA	-9	True	AATAAA	-13	NA	58363468	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339551_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.24	chr13	-	3632	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	448.591618289954	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1762	False	NA	-9	True	AATAAA	-13	NA	58363432	58323976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341077_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.27	chr13	-	3619	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	434.497594930053	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACACTTGGTTGTCTCGCC	1764	False	NA	-11	True	AATAAA	-11	NA	58363430	58323978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327440_58328613_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.29	chr13	-	3416	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	24	246	-10	-239	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCCCCAGACTGTATA	1751	False	NA	NA	False	ATTAAA	-14	NA	58363443	58324215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.3	chr13	-	3606	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-38	-7	-4	0	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCGCCTCTTTTGTA	1723	False	NA	-2	True	AATAAA	-20	NA	58363471	58323969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.30	chr13	-	3360	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-38	239	-4	-239	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCCCCAGACTGTATA	1723	False	NA	NA	False	ATTAAA	-14	NA	58363471	58324215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.31	chr13	-	2362	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	-27	1351	-27	12	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCGCGCCCCATGATTT	1700	False	NA	0	True	AATAAA	-19	NA	58363494	58325320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.32	chr13	-	2247	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	-32	1346	2	10	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGCGCGCCCCATGAT	1729	False	NA	-2	True	AATAAA	-17	NA	58363465	58325322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.33	chr13	-	4595	10	NIC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	12	8	intron_retention	FALSE	canonical	3	817	junction_3	195.659631396016	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATTTGCGCGCCCCATG	1739	False	NA	-4	True	AATAAA	-15	NA	58363455	58325324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.34	chr13	-	2124	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	478.506227754666	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	1774	False	NA	-12	True	AATAAA	-7	NA	58363420	58325332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097_58363209_58363276
ES.9356.35	chr13	-	3275	10	NNC	ENSMUSG00000005312.16	novel	3561	10	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	496.664156096066	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	1739	False	NA	-12	True	AATAAA	-7	NA	58363455	58325332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58345535_58346732_58346885_58363097
ES.9356.37	chr13	-	2257	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	555.742530314173	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	1787	False	NA	-12	True	AATAAA	-7	NA	58363407	58325332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327477_58328635_58328720_58330995_58331135_58339531_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.38	chr13	-	2010	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	15	1661	15	0	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACATGCTTTATTTC	1742	False	NA	NA	False	NA	NA	NA	58363452	58325630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.7	chr13	-	3617	11	NNC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	-8	3	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	438.824213096771	1129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTGTCTCGCCTCTTT	1753	False	NA	-6	True	AATAAA	-16	NA	58363441	58323973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328681_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9356.9	chr13	-	5924	10	NIC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	-1	2	intron_retention	FALSE	canonical	3	817	junction_3	195.659631396016	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTGTCTCGCCTCTT	1760	False	NA	-7	True	AATAAA	-15	NA	58363434	58323974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ES.9357.1	chr13	+	2742	3	Antisense	novelGene_ENSMUSG00000021552.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACTAAGCACAATGACT	1196	False	NA	NA	False	NA	NA	NA	58406066	58413091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_58407326_58411008_58411156_58411755
ES.9358.1	chr13	+	133	1	Intergenic	novelGene_7654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	58415913	58416046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58415900_58416000
ES.9359.1	chr13	-	2169	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-650	4	2	-4	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGTGTGATCTTCAC	NA	False	NA	-2	True	AATAAA	-18	NA	58422652	58381163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.10	chr13	-	2235	12	NNC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-293	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	71.4975581852016	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58422295	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58391614_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421110_58421636_58421887
ES.9359.11	chr13	-	2178	14	NNC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	70.3938203312507	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58421986	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58381473_58382529_58382611_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421040_58421636_58421887
ES.9359.12	chr13	-	8654	10	NIC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-88	18	intron_retention	FALSE	canonical	0	0	junction_4	55.8750811306617	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCAATAAAATTAATTTAC	NA	False	NA	-29	True	NA	NA	NA	58422090	58381190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58391615_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.13	chr13	-	1524	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-143	142	-143	-93	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTACAGTTTTATGTTC	NA	False	NA	NA	False	ACTAAA	-18	NA	58422145	58381301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.14	chr13	-	3366	1	NIC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-1374	-8565	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	9394	False	NA	NA	False	NA	NA	NA	58393139	58389773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58389800_58393100
ES.9359.15	chr13	-	2016	6	ISM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	-176	16687	-176	687	5prime_fragment	FALSE	canonical	2	68	junction_1	35.2964587458855	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58422178	58397846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.16	chr13	-	218	1	Intergenic	novelGene_7652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCATATTTGATTTTT	NA	False	NA	NA	False	NA	NA	NA	58415678	58415460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58415500_58415700
ES.9359.17	chr13	-	178	2	Intergenic	novelGene_7653	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTTTG	NA	False	NA	NA	False	NA	NA	NA	58446563	58415499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58415581_58446466
ES.9359.3	chr13	-	2029	13	NIC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-323	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	67.3916826388011	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58422325	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421447_58421636_58421887
ES.9359.5	chr13	-	8668	12	NNC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.5027602696258	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58422015	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58397826_58397864_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.7	chr13	-	1806	11	NNC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-296	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.6210656936836	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58422298	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391784_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ES.9359.8	chr13	-	1226	10	NNC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-194	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	67.0446690969609	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58411986	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391711_58403629_58403685_58407247_58407326_58411011_58411156_58411755
ES.9359.9	chr13	-	1610	12	NIC	ENSMUSG00000021552.8	novel	1523	12	NA	NA	-18	-5	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	64.7313584001647	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	58422672	58381164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58422465
ES.936.1	chr1	+	1400	7	ISM	ENSMUSG00000036480.10	ENSMUST00000044533.9	2180	13	2462	1	2462	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.21335164821342	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAATCTGGAGCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	87113496	87116126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87113759_87113992_87114156_87114296_87114477_87114605_87114771_87114867_87114931_87115217_87115325_87115666
ES.9360.1	chr13	-	3890	11	NNC	ENSMUSG00000060176.5	novel	5121	18	NA	NA	36	-15906	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1.28062484748657	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGCATTCGTTTTTC	NA	False	NA	NA	False	ATTAAA	-30	NA	58506900	58466988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679_58492639_58493408_58493644_58502378_58502762_58506716
ES.9360.2	chr13	-	3852	11	NNC	ENSMUSG00000060176.5	novel	5121	18	NA	NA	36	-15910	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	1.18743420870379	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTTGCATTCGTT	NA	False	NA	NA	False	ATTAAA	-26	NA	58506900	58466992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679_58492639_58493442_58493644_58502378_58502762_58506716
ES.9361.1	chr13	-	175	1	Intergenic	novelGene_7655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAATAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	58515241	58515066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58515100_58515200
ES.9362.1	chr13	+	3876	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	-19	-2	-4	2	multi-exon	FALSE	canonical	3	159	junction_1	108.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCATGGTGTCTC	NA	False	NA	11	True	NA	NA	NA	58550057	58558964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58554815_58554905_58555723
ES.9362.10	chr13	+	3653	4	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	14	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	176.305290775846	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCGTGGTCATGGTGT	NA	False	NA	8	True	NA	NA	NA	58550090	58558961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_58550332_58552384_58552470_58554815_58554905_58555723
ES.9362.11	chr13	+	3676	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-170	-1059	-170	3	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGGTCATGGTGTCTCT	NA	False	NA	12	True	NA	NA	NA	58550343	58558965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ES.9362.14	chr13	+	3700	5	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-100	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	155.165033109912	260	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTGGTCATGGTGTCT	NA	False	NA	10	True	NA	NA	NA	58550413	58558963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_58550604_58552384_58552470_58554397_58554494_58554815_58554905_58555723
ES.9362.15	chr13	+	2539	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-88	-4	-88	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550425	58557910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ES.9362.16	chr13	+	2195	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	354	1306	-83	-250	multi-exon	FALSE	canonical	3	159	junction_1	108.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTATTCTCAGTTT	NA	False	NA	NA	False	TTTAAA	-22	NA	58550430	58557656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58554815_58554905_58555723
ES.9362.18	chr13	+	3116	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-74	-595	-74	-457	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCAGTGAGATATTACT	NA	False	NA	NA	False	AATAAA	-20	NA	58550439	58558501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ES.9362.19	chr13	+	2239	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-68	276	-68	-276	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACAGGCAAATATTTG	NA	False	NA	NA	False	AATAAA	-31	NA	58550445	58557630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ES.9362.2	chr13	+	2540	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	2	1052	2	0	multi-exon	FALSE	canonical	3	21	junction_1	177.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550063	58557906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550332_58554815_58554905_58555723
ES.9362.20	chr13	+	3093	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	388	374	-49	-370	multi-exon	FALSE	canonical	3	159	junction_1	108.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTAGATATCTTCCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	58550464	58558588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58554815_58554905_58555723
ES.9362.21	chr13	+	3611	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	421	-177	-16	177	multi-exon	FALSE	canonical	3	159	junction_1	108.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCGGGCTAAGGGTGATT	NA	False	NA	NA	False	NA	NA	NA	58550497	58559139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58554815_58554905_58555723
ES.9362.23	chr13	+	2369	3	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550505	58557906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_58550604_58552381_58552470_58555723
ES.9362.24	chr13	+	3058	4	NNC	ENSMUSG00000035367.10	novel	4212	2	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.778580904664	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550739	58557910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_58551434_58552381_58552470_58554815_58554905_58555723
ES.9362.25	chr13	+	2314	3	ISM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	1663	251	-703	-251	3prime_fragment	FALSE	canonical	1	2	junction_1	187	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTATTCTCAGTT	NA	False	NA	NA	False	TTTAAA	-21	NA	58552176	58557655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_58552470_58554815_58554905_58555723
ES.9362.26	chr13	+	3762	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	153	297	153	-293	multi-exon	FALSE	canonical	3	376	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATTGGAGCACACTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	58553032	58557613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58554905_58555723
ES.9362.27	chr13	+	2184	1	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	2843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58555722	58557906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_58555700_58557900
ES.9362.3	chr13	+	3303	4	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	-7	-368	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	176.305290775846	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGATATCTTCCATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	58550069	58558590	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_58550332_58552384_58552470_58554815_58554905_58555723
ES.9362.4	chr13	+	3216	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	8	370	-7	-370	multi-exon	FALSE	canonical	3	21	junction_1	177.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTAGATATCTTCCATT	NA	False	NA	NA	False	ATTAAA	-14	NA	58550069	58558588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550332_58554815_58554905_58555723
ES.9362.5	chr13	+	7022	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	-2810	0	-7	0	multi-exon	FALSE	canonical	3	376	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550069	58557910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58554905_58555723
ES.9362.6	chr13	+	4673	3	NIC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-7	1	intron_retention	FALSE	canonical	1	2	junction_1	187	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTGAAAGAATGTTT	NA	False	NA	17	True	AATAAA	-30	NA	58550069	58557907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_58552470_58554815_58554905_58555723
ES.9362.7	chr13	+	2810	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	-7	1052	-7	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550069	58557910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_58550604_58554815_58554905_58555723
ES.9362.8	chr13	+	2611	4	NNC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	176.070061812526	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATATGTGAAAGAATG	NA	False	NA	14	True	AATAAA	-27	NA	58550078	58557904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_58550332_58552381_58552470_58554815_58554905_58555723
ES.9363.1	chr13	-	5627	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	43	-2619	43	2619	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGTAGAGGGTCTGATA	NA	False	NA	NA	False	NA	NA	NA	58532996	58525011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.100	chr13	-	4110	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	intron_retention	FALSE	canonical	3	31	junction_3	1968.48571843146	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4751	False	NA	-22	True	AATAAA	-16	NA	58550330	58539051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.101	chr13	-	3215	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-331	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4287	False	NA	-22	True	AATAAA	-16	NA	58550794	58539051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.102	chr13	-	5577	11	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	1	intron_retention	FALSE	canonical	3	5484	junction_1	614.317841186466	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGACGTGTGCCCAATT	4748	False	NA	-22	True	AATAAA	-16	NA	58550333	58539051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.103	chr13	-	2745	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4696	False	NA	-23	True	AATAAA	-15	NA	58550385	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.106	chr13	-	2614	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2591.04449429734	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5685	False	NA	-23	True	AATAAA	-15	NA	58549396	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ES.9363.107	chr13	-	2710	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2345.6966025086	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5120	False	NA	-23	True	AATAAA	-15	NA	58549961	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.108	chr13	-	3964	11	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	330	junction_7	2532.17718376894	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5128	False	NA	-23	True	AATAAA	-15	NA	58549953	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.109	chr13	-	2558	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2950.84430949667	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4767	False	NA	-23	True	AATAAA	-15	NA	58550314	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.11	chr13	-	1019	4	NNC	ENSMUSG00000021550.7	novel	3051	4	NA	NA	42	-1865	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_2	197.332770269467	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGGTGCACGCCTTT	NA	False	NA	-17	True	TATAAA	-19	NA	58532997	58529495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58529824_58530221_58530293_58531963_58532224_58532637
ES.9363.110	chr13	-	2944	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2532.99327750343	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4750	False	NA	-23	True	AATAAA	-15	NA	58550331	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541598_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545806_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.112	chr13	-	2668	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2596.40190495828	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4759	False	NA	-23	True	AATAAA	-15	NA	58550322	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541598_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.113	chr13	-	2994	13	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	330	junction_9	1908.79331428698	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4748	False	NA	-23	True	AATAAA	-15	NA	58550333	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.114	chr13	-	2627	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2524.91972805792	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4772	False	NA	-23	True	AATAAA	-15	NA	58550309	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541602_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.116	chr13	-	4635	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	4	0	intron_retention	FALSE	canonical	3	41	junction_12	2148.18471169394	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4755	False	NA	-23	True	AATAAA	-15	NA	58550326	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550202
ES.9363.117	chr13	-	2955	14	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	6	0	intron_retention	FALSE	canonical	3	4513	junction_1	874.161278499798	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4771	False	NA	-23	True	AATAAA	-15	NA	58550310	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.118	chr13	-	2842	15	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	9	0	intron_retention	FALSE	canonical	3	1429	junction_14	1749.94725284938	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5135	False	NA	-23	True	AATAAA	-15	NA	58549946	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.119	chr13	-	2527	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2567.58075305712	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4773	False	NA	-23	True	AATAAA	-15	NA	58550308	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540108_58541027_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.120	chr13	-	4005	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-1	0	intron_retention	FALSE	canonical	3	31	junction_3	2418.62144949894	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5124	False	NA	-23	True	AATAAA	-15	NA	58549957	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.122	chr13	-	2651	13	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	2992.36833345355	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544731_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.123	chr13	-	2624	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2763.56610369057	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5102	False	NA	-23	True	AATAAA	-15	NA	58549979	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.125	chr13	-	3041	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2555.37360981018	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5732	False	NA	-23	True	AATAAA	-15	NA	58549349	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.126	chr13	-	4334	13	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	4513	junction_1	869.628975802644	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.127	chr13	-	2801	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-247	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	2600.9891642706	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	3677	False	NA	-23	True	AATAAA	-15	NA	58551404	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58551169
ES.9363.128	chr13	-	5950	11	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	0	intron_retention	FALSE	canonical	3	6496	junction_10	397.933411515042	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4767	False	NA	-23	True	AATAAA	-15	NA	58550314	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.129	chr13	-	2706	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2494.09319471132	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.13	chr13	-	5037	2	NNC	ENSMUSG00000021550.7	novel	3051	4	NA	NA	-4538	-4855	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCATTAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58537577	58532485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58533752_58533806
ES.9363.130	chr13	-	2752	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2596.50739613105	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5715	False	NA	-23	True	AATAAA	-15	NA	58549366	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549180
ES.9363.133	chr13	-	4269	13	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-6	0	intron_retention	FALSE	canonical	3	1429	junction_12	1759.57885388963	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5145	False	NA	-23	True	AATAAA	-15	NA	58549936	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.134	chr13	-	2656	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1994.19465229062	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4778	False	NA	-23	True	AATAAA	-15	NA	58550303	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541593_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.135	chr13	-	3986	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	0	intron_retention	FALSE	canonical	0	0	junction_3	2030.33342643153	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4783	False	NA	-23	True	AATAAA	-15	NA	58550298	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.136	chr13	-	2593	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2524.56578257184	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4789	False	NA	-23	True	AATAAA	-15	NA	58550292	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.137	chr13	-	4813	13	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	5	0	intron_retention	FALSE	canonical	3	31	junction_3	2435.75537422286	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5169	False	NA	-23	True	AATAAA	-15	NA	58549912	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.138	chr13	-	2553	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2602.63230662139	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4762	False	NA	-23	True	AATAAA	-15	NA	58550319	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541056_58541505_58541598_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.139	chr13	-	2633	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2604.46737572666	3953	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5388	False	NA	-23	True	AATAAA	-15	NA	58549693	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549611
ES.9363.14	chr13	-	5057	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	2270	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3956	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTCTGAGTTGGGGTGGC	4751	False	NA	NA	False	AATAAA	-19	NA	58550330	58536685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.141	chr13	-	4951	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	1996.06066207084	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.143	chr13	-	5157	12	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	3	0	intron_retention	FALSE	canonical	0	0	junction_1	2067.02735011313	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4785	False	NA	-23	True	AATAAA	-15	NA	58550296	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541005_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.144	chr13	-	4319	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4568	junction_3	911.097660377614	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4748	False	NA	-23	True	AATAAA	-15	NA	58550333	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.145	chr13	-	2942	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_13	2932.33961157863	3953	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5731	False	NA	-23	True	AATAAA	-15	NA	58549350	58539052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548990
ES.9363.15	chr13	-	5613	13	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	8	646	intron_retention	FALSE	canonical	3	31	junction_3	2406.06225097265	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTGAGAGGTTACACA	5172	False	NA	NA	False	ATTAAA	-14	NA	58549909	58538309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.150	chr13	-	3019	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2915.40151608659	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATGACGTGTGCCCAA	5720	False	NA	-24	True	AATAAA	-14	NA	58549361	58539053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.151	chr13	-	2673	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	2549.84493025897	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATGACGTGTGCCCAA	4751	False	NA	-24	True	AATAAA	-14	NA	58550330	58539053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547722_58547805_58548146_58548232_58550206
ES.9363.154	chr13	-	2606	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2915.53706928361	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATGACGTGTGCCCAA	4783	False	NA	-24	True	AATAAA	-14	NA	58550298	58539053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542298_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.156	chr13	-	2772	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2514.64958405982	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATGACGTGTGCCCA	4751	False	NA	-25	True	AATAAA	-13	NA	58550330	58539054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544738_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.157	chr13	-	5942	10	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	5484	junction_1	644.711668734535	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATGACGTGTGCCCA	4759	False	NA	-25	True	AATAAA	-13	NA	58550322	58539054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541974_58542123_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.158	chr13	-	2681	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2589.13253142942	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTATGACGTGTGCCCA	4761	False	NA	-25	True	AATAAA	-13	NA	58550320	58539054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541581_58541864_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544076_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.16	chr13	-	3417	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	636	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTTGGTGAG	4757	False	NA	NA	False	ATTAAA	-4	NA	58550324	58538319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.161	chr13	-	2582	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	-6	25	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2590.86606113584	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTGTAGTAACTTG	4774	False	NA	-96	True	AAAAAG	-10	NA	58550307	58539125	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.162	chr13	-	2908	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	36	15	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2579.83941518911	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTGGATGTTTTGTG	5733	False	NA	-106	True	NA	NA	NA	58549348	58539135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.163	chr13	-	2558	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1994.19465229062	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAATGGAAAAAGTTC	4769	False	NA	-122	True	NA	NA	NA	58550312	58539151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.164	chr13	-	5797	10	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-47	intron_retention	FALSE	non_canonical	0	0	junction_2	2265.90732378886	3952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTGTGTTGAATT	4766	False	NA	NA	False	AAAAAG	-11	NA	58550315	58539197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541974_58542118_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.165	chr13	-	2507	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	-50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2767.10155216609	3951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTTGTGTGTTGA	5151	False	NA	NA	False	AAAAAG	-8	NA	58549930	58539200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548155_58548232_58549877
ES.9363.166	chr13	-	2590	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-2	-50	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTTGTGTGTTGA	4763	False	NA	NA	False	AAAAAG	-8	NA	58550318	58539200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.167	chr13	-	2440	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	18	-50	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2380.72947254168	3951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTTGTGTGTTGA	5182	False	NA	NA	False	AAAAAG	-8	NA	58549899	58539200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.168	chr13	-	2543	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	-52	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTCTCTGTTGTGTGTT	4748	False	NA	NA	False	AAAAAG	-6	NA	58550333	58539202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.169	chr13	-	2538	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	-68	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2345.6966025086	3950	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAGATGTACCAT	5126	False	NA	NA	False	AATATA	-35	NA	58549955	58539218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.17	chr13	-	3387	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	630	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1994.19465229062	3955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTTGTGTGTCTGTT	4766	False	NA	NA	False	TTTAAA	-13	NA	58550315	58538325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.170	chr13	-	1730	8	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	-1	-68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3125.16733266282	3951	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAGATGTACCAT	4750	False	NA	NA	False	AATATA	-35	NA	58550331	58539218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.171	chr13	-	2048	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTCTTTTTTTTTTT	4745	False	NA	-2	True	AATAAA	-17	NA	58550336	58539760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.172	chr13	-	1968	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2590.86606113584	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGGTCTTTTTTTTT	4751	False	NA	-4	True	AATAAA	-15	NA	58550330	58539762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.173	chr13	-	1973	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-38	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2380.72947254168	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGGTCTTTTTTTTT	5087	False	NA	-4	True	AATAAA	-15	NA	58549994	58539762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.175	chr13	-	2042	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-62	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGGTCTTTTTTTTT	4689	False	NA	-4	True	AATAAA	-15	NA	58550392	58539762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.176	chr13	-	2029	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1939.41602824465	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4750	False	NA	-5	True	AATAAA	-14	NA	58550331	58539763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.18	chr13	-	5900	12	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-2	628	intron_retention	FALSE	canonical	3	4513	junction_1	826.717396026334	3955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATTTGTGTGTCTG	4763	False	NA	NA	False	TTTAAA	-11	NA	58550318	58538327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.180	chr13	-	2131	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-19	-1	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_14	2599.66009944628	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5193	False	NA	-6	True	AATAAA	-13	NA	58549888	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549611
ES.9363.181	chr13	-	1496	9	NNC	ENSMUSG00000021546.19	novel	2585	12	NA	NA	46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2891.45024166075	3931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	58544714	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541597_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640
ES.9363.182	chr13	-	2349	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2550.06706294368	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5723	False	NA	-6	True	AATAAA	-13	NA	58549358	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.183	chr13	-	6233	8	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	6496	junction_7	429.513155817617	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4757	False	NA	-6	True	AATAAA	-13	NA	58550324	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58541974_58542123_58542179_58542291_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.185	chr13	-	1972	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2541.37854784945	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4751	False	NA	-6	True	AATAAA	-13	NA	58550330	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544708_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.187	chr13	-	2068	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_3	2560.07594055891	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5194	False	NA	-6	True	AATAAA	-13	NA	58549887	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549673
ES.9363.189	chr13	-	1925	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2386.43420275557	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.19	chr13	-	3420	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	588	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTGTTATGATTTATTG	4766	False	NA	NA	False	AATAAA	-33	NA	58550315	58538367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.190	chr13	-	1898	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2386.43420275557	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5145	False	NA	-6	True	AATAAA	-13	NA	58549936	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.193	chr13	-	1965	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-15	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2561.53390449503	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5682	False	NA	-6	True	AATAAA	-13	NA	58549399	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ES.9363.194	chr13	-	4198	13	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	intron_retention	FALSE	canonical	3	31	junction_3	2406.06225097265	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.195	chr13	-	1970	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2351.55163386533	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5133	False	NA	-6	True	AATAAA	-13	NA	58549948	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.196	chr13	-	1861	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	2568.4311945272	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4804	False	NA	-6	True	AATAAA	-13	NA	58550277	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541056_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.197	chr13	-	2455	16	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-230	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	2745.25999902053	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4388	False	NA	-6	True	AATAAA	-13	NA	58550693	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206
ES.9363.198	chr13	-	1882	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2763.56610369057	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.2	chr13	-	4348	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	22	-1319	22	1319	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAATGTGCAACTCAA	NA	False	NA	NA	False	NA	NA	NA	58533017	58526311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.20	chr13	-	3475	16	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-1	576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	2747.37364202412	3955	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATCTTCAAAGCAATTGT	4750	False	NA	NA	False	AATAAA	-21	NA	58550331	58538379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549929_58550206
ES.9363.200	chr13	-	2286	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	29	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2579.83941518911	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5726	False	NA	-6	True	AATAAA	-13	NA	58549355	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.201	chr13	-	1993	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	2598.995924646	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5238	False	NA	-6	True	AATAAA	-13	NA	58549843	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549704
ES.9363.202	chr13	-	1979	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2494.09319471132	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4766	False	NA	-6	True	AATAAA	-13	NA	58550315	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.205	chr13	-	3254	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	31	junction_3	2418.62144949894	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5163	False	NA	-6	True	AATAAA	-13	NA	58549918	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.206	chr13	-	1906	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2619.59134985529	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4751	False	NA	-6	True	AATAAA	-13	NA	58550330	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.207	chr13	-	1968	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1994.19465229062	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4750	False	NA	-6	True	AATAAA	-13	NA	58550331	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.208	chr13	-	2040	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1939.41602824465	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4748	False	NA	-6	True	AATAAA	-13	NA	58550333	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.209	chr13	-	1882	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2524.91972805792	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4804	False	NA	-6	True	AATAAA	-13	NA	58550277	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541872_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.21	chr13	-	3322	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	572	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2494.09319471132	3955	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTATCTTCAAAGCAA	4804	False	NA	NA	False	AATAAA	-17	NA	58550277	58538383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.210	chr13	-	4787	11	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	1429	junction_10	1775.08033621017	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5154	False	NA	-6	True	AATAAA	-13	NA	58549927	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.211	chr13	-	3586	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	4	-1	intron_retention	FALSE	canonical	3	4568	junction_3	911.097660377614	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4769	False	NA	-6	True	AATAAA	-13	NA	58550312	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.214	chr13	-	1870	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	2927.67418847217	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4751	False	NA	-6	True	AATAAA	-13	NA	58550330	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541056_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.215	chr13	-	1985	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2351.55163386533	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.216	chr13	-	1993	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1939.41602824465	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4770	False	NA	-6	True	AATAAA	-13	NA	58550311	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.217	chr13	-	1952	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2596.40190495828	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4750	False	NA	-6	True	AATAAA	-13	NA	58550331	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.218	chr13	-	1940	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2586.84150252459	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4783	False	NA	-6	True	AATAAA	-13	NA	58550298	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542297_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.219	chr13	-	3497	14	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-5	-1	intron_retention	FALSE	canonical	3	4513	junction_1	1048.35524039286	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4798	False	NA	-6	True	AATAAA	-13	NA	58550283	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.22	chr13	-	3278	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	2	570	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2380.72947254168	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATGTATCTTCAAAGC	5159	False	NA	NA	False	AATAAA	-15	NA	58549922	58538385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.221	chr13	-	2212	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	25	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2604.96506694428	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5722	False	NA	-6	True	AATAAA	-13	NA	58549359	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548990
ES.9363.222	chr13	-	2002	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1939.41602824465	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4781	False	NA	-6	True	AATAAA	-13	NA	58550300	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541864_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.224	chr13	-	2001	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-63	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2755.82629067557	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5062	False	NA	-6	True	AATAAA	-13	NA	58550019	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.227	chr13	-	1822	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	2832.7397245315	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5172	False	NA	-6	True	AATAAA	-13	NA	58549909	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541056_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.228	chr13	-	1938	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3002.51227800851	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4783	False	NA	-6	True	AATAAA	-13	NA	58550298	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541011_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542984_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.229	chr13	-	1962	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2799.73002925039	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544734_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.23	chr13	-	2785	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-31	12	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2380.72947254168	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGAAGTGTTT	5094	False	NA	4	True	AATACA	-27	NA	58549987	58538943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.230	chr13	-	1917	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2780.06723600971	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5132	False	NA	-6	True	AATAAA	-13	NA	58549949	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548155_58548232_58549877
ES.9363.232	chr13	-	1815	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2875.73737392464	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5171	False	NA	-6	True	AATAAA	-13	NA	58549910	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.235	chr13	-	1969	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2499.69908484859	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4761	False	NA	-6	True	AATAAA	-13	NA	58550320	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.236	chr13	-	3647	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	intron_retention	FALSE	canonical	3	31	junction_3	2089.65623668105	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4783	False	NA	-6	True	AATAAA	-13	NA	58550298	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58548232_58550206
ES.9363.238	chr13	-	1967	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1994.19465229062	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4761	False	NA	-6	True	AATAAA	-13	NA	58550320	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.239	chr13	-	1895	14	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2864.48530853978	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5150	False	NA	-6	True	AATAAA	-13	NA	58549931	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.24	chr13	-	2767	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2596.40190495828	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGTGTGTGTGAA	4750	False	NA	-2	True	AATACA	-21	NA	58550331	58538949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.240	chr13	-	4191	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	-1	intron_retention	FALSE	canonical	3	31	junction_3	2040.50031991067	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4750	False	NA	-6	True	AATAAA	-13	NA	58550331	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.241	chr13	-	1991	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1938.93086992996	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4783	False	NA	-6	True	AATAAA	-13	NA	58550298	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.242	chr13	-	2185	15	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	4513	junction_1	1052.55653054836	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4751	False	NA	-6	True	AATAAA	-13	NA	58550330	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.243	chr13	-	1994	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2943.54697272054	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4781	False	NA	-6	True	AATAAA	-13	NA	58550300	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543099_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547022_58547706_58547805_58548146_58548232_58550206
ES.9363.244	chr13	-	2037	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2567.05623114835	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4761	False	NA	-6	True	AATAAA	-13	NA	58550320	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543378_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.245	chr13	-	1560	10	NNC	ENSMUSG00000021546.19	novel	2585	12	NA	NA	82	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2860.69774360153	3931	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	58544678	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58542010_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640
ES.9363.247	chr13	-	2215	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	3035.8295435929	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5725	False	NA	-6	True	AATAAA	-13	NA	58549356	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.248	chr13	-	1830	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	-12	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	3045.0730794468	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5685	False	NA	-6	True	AATAAA	-13	NA	58549396	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ES.9363.249	chr13	-	2096	15	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	5	-1	intron_retention	FALSE	canonical	3	1429	junction_14	1749.94725284938	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5169	False	NA	-6	True	AATAAA	-13	NA	58549912	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.250	chr13	-	2070	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-168	-1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_14	2571.70828339801	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	3756	False	NA	-6	True	AATAAA	-13	NA	58551325	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58551169
ES.9363.252	chr13	-	1900	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_3	2779.51289228299	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5147	False	NA	-6	True	AATAAA	-13	NA	58549934	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545600_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.255	chr13	-	1954	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2351.17351181342	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5149	False	NA	-6	True	AATAAA	-13	NA	58549932	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.257	chr13	-	2030	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2596.50739613105	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5725	False	NA	-6	True	AATAAA	-13	NA	58549356	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549180
ES.9363.258	chr13	-	2007	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2556.99201749141	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4759	False	NA	-6	True	AATAAA	-13	NA	58550322	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541872_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544734_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.259	chr13	-	2267	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	47	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2585.0254380385	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5744	False	NA	-6	True	AATAAA	-13	NA	58549337	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.26	chr13	-	2811	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	5	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2494.09319471132	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTGTGTGTGA	4748	False	NA	-3	True	AATACA	-20	NA	58550333	58538950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.260	chr13	-	2338	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2555.37360981018	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5723	False	NA	-6	True	AATAAA	-13	NA	58549358	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.261	chr13	-	1986	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2498.99849837849	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4783	False	NA	-6	True	AATAAA	-13	NA	58550298	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548155_58548232_58550206
ES.9363.262	chr13	-	1824	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	2618.69178685775	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4807	False	NA	-6	True	AATAAA	-13	NA	58550274	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58548146_58548232_58550206
ES.9363.263	chr13	-	2290	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2919.79895352301	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5723	False	NA	-6	True	AATAAA	-13	NA	58549358	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.265	chr13	-	4097	13	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	7	-1	intron_retention	FALSE	canonical	1	1	junction_5	2877.16112494398	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	5171	False	NA	-6	True	AATAAA	-13	NA	58549910	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542177_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.267	chr13	-	1839	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	2639.29751726011	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTGGTGGTCTTTTTTT	4767	False	NA	-6	True	AATAAA	-13	NA	58550314	58539764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541954_58542399_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.269	chr13	-	4239	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	31	junction_3	1987.84776656955	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4761	False	NA	-7	True	AATAAA	-12	NA	58550320	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.27	chr13	-	2867	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-15	5	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1931.89781519814	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGTGTGTGTGA	4736	False	NA	-3	True	AATACA	-20	NA	58550345	58538950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.270	chr13	-	1852	13	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2950.84430949667	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4760	False	NA	-7	True	AATAAA	-12	NA	58550321	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.271	chr13	-	1947	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1993.72779368351	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4766	False	NA	-7	True	AATAAA	-12	NA	58550315	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.273	chr13	-	4442	12	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	8	-2	intron_retention	FALSE	canonical	3	1429	junction_11	1693.36315563423	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5172	False	NA	-7	True	AATAAA	-12	NA	58549909	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.274	chr13	-	4555	12	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	1	-2	intron_retention	FALSE	canonical	3	31	junction_3	2484.58558328369	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5153	False	NA	-7	True	AATAAA	-12	NA	58549928	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.275	chr13	-	3369	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-48	-2	intron_retention	FALSE	non_canonical	0	0	junction_3	2030.33342643153	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4703	False	NA	-7	True	AATAAA	-12	NA	58550378	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.277	chr13	-	2346	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	22	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	2971.40867180837	3936	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5719	False	NA	-7	True	AATAAA	-12	NA	58549362	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547799_58548146_58548232_58548923
ES.9363.279	chr13	-	1805	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	2850.32681352114	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5128	False	NA	-7	True	AATAAA	-12	NA	58549953	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541056_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.28	chr13	-	2660	13	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2950.84430949667	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTGTGTGTGTGTGTG	4766	False	NA	-4	True	AATACA	-19	NA	58550315	58538951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.281	chr13	-	2199	13	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	5	-2	intron_retention	FALSE	canonical	3	330	junction_9	1964.59336158628	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4770	False	NA	-7	True	AATAAA	-12	NA	58550311	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.282	chr13	-	1932	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2599.65535097973	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4783	False	NA	-7	True	AATAAA	-12	NA	58550298	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541167_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.283	chr13	-	1825	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	-6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2880.34133825352	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5145	False	NA	-7	True	AATAAA	-12	NA	58549936	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.285	chr13	-	1764	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	3084.59897943077	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5125	False	NA	-7	True	AATAAA	-12	NA	58549956	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541056_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.286	chr13	-	1993	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2541.37854784945	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4759	False	NA	-7	True	AATAAA	-12	NA	58550322	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544738_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.29	chr13	-	3205	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-281	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	1986.9610217719	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTGTGTGTGTGTGTG	4337	False	NA	-4	True	AATACA	-19	NA	58550744	58538951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.290	chr13	-	2259	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	31	junction_3	2585.56043247881	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4767	False	NA	-7	True	AATAAA	-12	NA	58550314	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58548232_58550206
ES.9363.292	chr13	-	3274	12	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	330	junction_8	1997.18341754226	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4767	False	NA	-7	True	AATAAA	-12	NA	58550314	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58541180_58541505_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.293	chr13	-	4396	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	29	-2	intron_retention	FALSE	canonical	3	31	junction_3	2048.86320106216	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	5726	False	NA	-7	True	AATAAA	-12	NA	58549355	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146
ES.9363.294	chr13	-	3619	13	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	4513	junction_1	869.628975802644	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTGGTGGTCTTTTTT	4753	False	NA	-7	True	AATAAA	-12	NA	58550328	58539765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.296	chr13	-	4730	12	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	-3	intron_retention	FALSE	canonical	3	328	junction_3	2035.70371206268	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTTGGTGGTCTTTTT	4780	False	NA	-8	True	AATAAA	-11	NA	58550301	58539766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541666_58541974_58542123_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.297	chr13	-	4475	12	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	1429	junction_11	1821.12223143264	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTTGGTGGTCTTTTT	5150	False	NA	-8	True	AATAAA	-11	NA	58549931	58539766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.298	chr13	-	1945	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	2595.72357593274	3937	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTTGGTGGTCTTTTT	4773	False	NA	-8	True	AATAAA	-11	NA	58550308	58539766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543396_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.3	chr13	-	3084	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	9	-42	9	42	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTATGACTGGTACTA	NA	False	NA	NA	False	NA	NA	NA	58533030	58527588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.30	chr13	-	2986	13	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	26	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	3220.83676584552	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTGTGTGTGTGTGTG	5723	False	NA	-4	True	AATACA	-19	NA	58549358	58538951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.302	chr13	-	1943	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2596.40190495828	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTATTTTTGGTGGTCTTT	4769	False	NA	-10	True	AATAAA	-9	NA	58550312	58539768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.303	chr13	-	2304	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	22	4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2915.40151608659	3936	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTATTTTTGGTGGTCTT	5719	False	NA	-11	True	AATAAA	-8	NA	58549362	58539769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.305	chr13	-	3286	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	-13	intron_retention	FALSE	canonical	3	31	junction_3	2022.80759248452	3937	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATAAATTTAGTGAAT	4780	False	NA	-28	True	AAGAAA	-14	NA	58550301	58539786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.306	chr13	-	853	7	ISM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	2	4633	2	17	5prime_fragment	FALSE	canonical	3	6496	junction_6	569.329918022543	3746	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGATTGTCCTTTTTG	4767	False	NA	NA	False	AATAAA	-16	NA	58550314	58543685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.307	chr13	-	499	5	ISM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-4	6413	1	-615	5prime_fragment	FALSE	canonical	3	6496	junction_4	601.852349002644	3713	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTTTCAAGTTTCTG	4761	False	NA	NA	False	ATTAAA	-21	NA	58550320	58545465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.32	chr13	-	2657	13	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2955.3349347221	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTGTGTGTGTGTGTGT	4753	False	NA	-5	True	AATACA	-18	NA	58550328	58538952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.34	chr13	-	3102	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2579.83941518911	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTGTGTGTGTGTGT	5720	False	NA	-7	True	AATACA	-16	NA	58549361	58538954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.35	chr13	-	2907	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	2569.66919672791	3953	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTGTGTGTGTGTGT	5194	False	NA	-7	True	AATACA	-16	NA	58549887	58538954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549704
ES.9363.36	chr13	-	2905	16	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	2745.25999902053	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTGTGTGTGTGTGT	4748	False	NA	-7	True	AATACA	-16	NA	58550333	58538954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206
ES.9363.37	chr13	-	2837	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1939.41602824465	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTGTGTGTGTGTGT	4751	False	NA	-7	True	AATACA	-16	NA	58550330	58538954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.38	chr13	-	4356	14	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	4513	junction_1	1048.35524039286	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4748	False	NA	-8	True	AATACA	-15	NA	58550333	58538955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.39	chr13	-	2884	15	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2560.87838485954	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4750	False	NA	-8	True	AATACA	-15	NA	58550331	58538955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58542010_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.4	chr13	-	1890	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	14	1147	14	-1147	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGTCCTTCTCAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	58533025	58528777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.41	chr13	-	4149	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	31	junction_3	2022.80759248452	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4748	False	NA	-8	True	AATACA	-15	NA	58550333	58538955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.42	chr13	-	5976	12	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	4568	junction_2	812.701901169973	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4760	False	NA	-8	True	AATACA	-15	NA	58550321	58538955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.43	chr13	-	3151	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	0	intron_retention	FALSE	canonical	3	31	junction_3	2054.58720713334	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4766	False	NA	-8	True	AATACA	-15	NA	58550315	58538955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.44	chr13	-	2678	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2386.43420275557	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5173	False	NA	-9	True	AATACA	-14	NA	58549908	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.46	chr13	-	4835	12	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	7	-1	intron_retention	FALSE	canonical	3	31	junction_3	2912.13845484127	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5171	False	NA	-9	True	AATACA	-14	NA	58549910	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.48	chr13	-	2791	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-16	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1994.19465229062	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4735	False	NA	-9	True	AATACA	-14	NA	58550346	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.49	chr13	-	5058	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	31	junction_3	1987.84776656955	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4751	False	NA	-9	True	AATACA	-14	NA	58550330	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.5	chr13	-	1633	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	9	1409	9	-1409	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACGGTTGCCAACTGTG	NA	False	NA	NA	False	AATAGA	-16	NA	58533030	58529039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.50	chr13	-	2791	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-33	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2561.53390449503	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5664	False	NA	-9	True	AATACA	-14	NA	58549417	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
ES.9363.51	chr13	-	2848	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1939.41602824465	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4748	False	NA	-9	True	AATACA	-14	NA	58550333	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.52	chr13	-	2776	14	NNC	ENSMUSG00000021546.19	novel	2626	15	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2590.86606113584	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4749	False	NA	-9	True	AATACA	-14	NA	58550332	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.53	chr13	-	2788	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1994.19465229062	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4748	False	NA	-9	True	AATACA	-14	NA	58550333	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541599_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.57	chr13	-	2750	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2751.08029561105	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5132	False	NA	-9	True	AATACA	-14	NA	58549949	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.59	chr13	-	2809	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2570.46883379476	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4763	False	NA	-9	True	AATACA	-14	NA	58550318	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541155_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.6	chr13	-	1370	4	NNC	ENSMUSG00000021550.7	novel	3051	4	NA	NA	58	-1618	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	208.160194721918	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATGTCTTCAGTTGGT	NA	False	NA	-2	True	NA	NA	NA	58532981	58529248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58529824_58530221_58530413_58531963_58532224_58532637
ES.9363.61	chr13	-	2691	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2386.43420275557	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5153	False	NA	-9	True	AATACA	-14	NA	58549928	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541880_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.62	chr13	-	2718	15	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	1993.72779368351	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4804	False	NA	-9	True	AATACA	-14	NA	58550277	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.63	chr13	-	2760	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-18	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2519.4406536175	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4733	False	NA	-9	True	AATACA	-14	NA	58550348	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.64	chr13	-	2710	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	2785.25476796091	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5173	False	NA	-9	True	AATACA	-14	NA	58549908	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544731_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.65	chr13	-	5001	13	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	31	junction_3	2040.50031991067	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4748	False	NA	-9	True	AATACA	-14	NA	58550333	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.66	chr13	-	2717	14	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2619.59134985529	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4748	False	NA	-9	True	AATACA	-14	NA	58550333	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.67	chr13	-	2900	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	26	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2567.12329271502	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5723	False	NA	-9	True	AATACA	-14	NA	58549358	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549180
ES.9363.68	chr13	-	2802	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2351.55163386533	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5126	False	NA	-9	True	AATACA	-14	NA	58549955	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541602_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.69	chr13	-	2936	13	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	2	-1	intron_retention	FALSE	canonical	3	31	junction_3	2570.71178399853	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4767	False	NA	-9	True	AATACA	-14	NA	58550314	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.71	chr13	-	2791	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2351.55163386533	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5120	False	NA	-9	True	AATACA	-14	NA	58549961	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.72	chr13	-	2726	14	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2859.79353746439	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	5128	False	NA	-9	True	AATACA	-14	NA	58549953	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.73	chr13	-	2949	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-1	intron_retention	FALSE	canonical	3	330	junction_10	1942.72041007346	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGTTTTGTGTGTGTGT	4751	False	NA	-9	True	AATACA	-14	NA	58550330	58538956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.74	chr13	-	3252	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-70	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2550.06706294368	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTTTTGTGTGTGTG	5627	False	NA	-10	True	AATACA	-13	NA	58549454	58538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.75	chr13	-	2725	13	NNC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2945.57123657233	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTTTTGTGTGTGTG	4755	False	NA	-10	True	AATACA	-13	NA	58550326	58538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.76	chr13	-	3092	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	23	-2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_14	2570.51856119916	3953	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTTTTGTGTGTGTG	5720	False	NA	-10	True	AATACA	-13	NA	58549361	58538957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548990
ES.9363.79	chr13	-	2786	14	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2499.69908484859	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGGGTTTTGTGTGTGT	4750	False	NA	-11	True	AATACA	-12	NA	58550331	58538958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541585_58541884_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.8	chr13	-	2715	3	NIC	ENSMUSG00000021550.7	novel	3051	4	NA	NA	19	-1863	intron_retention	FALSE	canonical	3	428	junction_2	13	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGTGCACGCCTTTAG	NA	False	NA	-15	True	TATAAA	-21	NA	58533020	58529493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58529824_58530221_58532224_58532637
ES.9363.80	chr13	-	3129	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	-3	intron_retention	FALSE	canonical	3	5484	junction_1	675.88189157644	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGGGTTTTGTGTGTGT	4751	False	NA	-11	True	AATACA	-12	NA	58550330	58538958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.81	chr13	-	5266	13	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-3	-3	intron_retention	FALSE	canonical	3	4568	junction_3	863.744014290242	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGGGTTTTGTGTGTGT	4748	False	NA	-11	True	AATACA	-12	NA	58550333	58538958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.82	chr13	-	3038	14	NNC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	35	-7	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2924.63960658444	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTATGGGGTTTTGTGT	5732	False	NA	-15	True	AATACA	-8	NA	58549349	58538962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
ES.9363.86	chr13	-	2782	15	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-2	0	intron_retention	FALSE	canonical	3	5293	junction_3	799.462105520496	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4801	False	NA	-19	True	AATAAA	-19	NA	58550280	58539048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541180_58541505_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.89	chr13	-	2964	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_7	2005.34183685801	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4751	False	NA	-19	True	AATAAA	-19	NA	58550330	58539048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543384_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.9	chr13	-	1196	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	-8	1863	-8	-1863	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGGTGCACGCCTTTAG	NA	False	NA	-15	True	TATAAA	-21	NA	58533047	58529493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ES.9363.90	chr13	-	6727	8	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	5484	junction_1	727.955734245159	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4760	False	NA	-19	True	AATAAA	-19	NA	58550321	58539048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540291_58541009_58541974_58542123_58542179_58542291_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.91	chr13	-	2772	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	31	junction_3	2560.07594055891	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	5206	False	NA	-19	True	AATAAA	-19	NA	58549875	58539048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549673
ES.9363.92	chr13	-	2662	15	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	2380.72947254168	3953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	5112	False	NA	-19	True	AATAAA	-19	NA	58549969	58539048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ES.9363.94	chr13	-	5373	12	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	5	-1	intron_retention	FALSE	canonical	3	4513	junction_1	1052.74329552887	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACGTGTGCCCAATTTG	4770	False	NA	-20	True	AATAAA	-18	NA	58550311	58539049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541974_58542123_58542179_58542291_58542600_58542978_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.95	chr13	-	2733	15	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	2558.70782618804	3954	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACGTGTGCCCAATTTG	4761	False	NA	-20	True	AATAAA	-18	NA	58550320	58539049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542177_58542299_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ES.9363.97	chr13	-	5436	10	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	2	-2	intron_retention	FALSE	canonical	3	4513	junction_1	900.99115518877	3954	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGACGTGTGCCCAATTT	4767	False	NA	-21	True	AATAAA	-17	NA	58550314	58539050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_58540231_58541009_58541180_58541505_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58547027_58547706_58547805_58548146_58548232_58550206
ES.9364.1	chr13	-	2608	1	Antisense	novelGene_ENSMUSG00000035367.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAAAG	996	False	NA	NA	False	NA	NA	NA	58554085	58551477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_58551500_58554100
ES.9365.1	chr13	+	159	1	Intergenic	novelGene_7656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	58594137	58594296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58594100_58594300
ES.9366.1	chr13	+	177	1	Intergenic	novelGene_7657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCTGAGTGAGCAGAG	NA	False	NA	NA	False	NA	NA	NA	58621356	58621533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58621400_58621500
ES.9367.1	chr13	-	1065	1	Intergenic	novelGene_7658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGGCTGGACCTGAGA	NA	False	NA	NA	False	AATAAA	-15	NA	58630674	58629609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58629600_58630700
ES.9368.1	chr13	-	157	1	Intergenic	novelGene_7659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAAATGTTGCCCTTT	NA	False	NA	NA	False	NA	NA	NA	58650756	58650599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58650600_58650800
ES.9369.1	chr13	-	159	1	Intergenic	novelGene_7660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACATAAATAAATCTTAA	NA	False	NA	NA	False	NA	NA	NA	58674903	58674744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58674700_58674900
ES.937.1	chr1	+	805	3	FSM	ENSMUSG00000026251.14	ENSMUST00000189970.2	538	3	24	-291	-6	291	multi-exon	FALSE	canonical	2	2	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGACGGGCCTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	87118352	87119779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87118465_87118696_87118852_87119241
ES.937.2	chr1	+	2911	12	FSM	ENSMUSG00000026251.14	ENSMUST00000073252.9	2925	12	15	-1	15	1	multi-exon	FALSE	canonical	0	0	junction_4	1.67628081041689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGTGGTAATTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	87118373	87127793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87118465_87118696_87118852_87119241_87119287_87119935_87120046_87120207_87120364_87120567_87120678_87122521_87122723_87123206_87123319_87123404_87123520_87125004_87125210_87125296_87125416_87126301
ES.9370.1	chr13	-	216	1	Intergenic	novelGene_7661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTAGCCATTGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	58681409	58681193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58681200_58681400
ES.9371.1	chr13	+	156	1	Intergenic	novelGene_7662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	58720082	58720238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58720100_58720200
ES.9372.1	chr13	+	158	1	Intergenic	novelGene_7663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6326	False	NA	NA	False	NA	NA	NA	58750332	58750490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58750300_58750500
ES.9373.1	chr13	-	4584	18	FSM	ENSMUSG00000021553.15	ENSMUST00000022036.14	4567	18	-19	2	-19	-2	multi-exon	FALSE	canonical	0	0	junction_1	1.22545097976469	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGATTATTTGTTGG	3599	False	NA	NA	False	NA	NA	NA	58758710	58701120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_58703631_58706022_58706135_58706366_58706466_58707022_58707105_58710828_58711027_58711830_58712000_58714038_58714170_58717090_58717217_58719258_58719340_58720370_58720452_58721257_58721336_58722054_58722169_58724538_58724684_58726218_58726409_58728328_58728421_58730427_58730514_58735995_58736086_58758510
ES.9373.2	chr13	-	7035	2	ISM	ENSMUSG00000021553.15	ENSMUST00000140760.2	757	4	-4469	7911	-4469	-5	5prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTTGGGATTATTTGT	NA	False	NA	NA	False	NA	NA	NA	58710550	58701123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58703631_58706022
ES.9373.3	chr13	-	2008	14	ISM	ENSMUSG00000021553.15	ENSMUST00000022036.14	4567	18	0	9464	0	-9464	5prime_fragment	FALSE	canonical	0	0	junction_7	1.23076923076923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACACTGTGACTTGTTCT	3618	False	NA	NA	False	NA	NA	NA	58758691	58710582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_58711027_58711830_58712000_58714038_58714170_58717090_58717217_58719258_58719340_58720370_58720452_58721257_58721336_58722054_58722169_58724538_58724684_58726218_58726409_58728328_58728421_58730427_58730514_58735995_58736086_58758510
ES.9374.1	chr13	+	167	1	Intergenic	novelGene_7664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGATATGGTATGCTAGA	4035	False	NA	NA	False	NA	NA	NA	58760552	58760719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58760600_58760700
ES.9375.1	chr13	-	180	1	Intergenic	novelGene_7665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGCAATAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	58794709	58794529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58794500_58794700
ES.9376.1	chr13	-	178	1	Intergenic	novelGene_7666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGATAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	58853977	58853799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_58853800_58854000
ES.9377.1	chr13	+	179	1	Intergenic	novelGene_7667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAAGCAGGT	NA	False	NA	NA	False	NA	NA	NA	58906173	58906352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_58906200_58906400
ES.9378.1	chr13	-	3415	1	Genic_Genomic	ENSMUSG00000114231.2	novel	NA	NA	NA	NA	-17	-18593	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	58945279	58941864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_58941900_58945300
ES.9378.2	chr13	-	1237	1	Genic_Genomic	ENSMUSG00000114231.2	novel	NA	NA	NA	NA	-10	-20764	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	58945272	58944035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_58944000_58945300
ES.9379.1	chr13	-	4932	1	Intergenic	novelGene_7668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	59043097	59038165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59038200_59043100
ES.9379.2	chr13	-	2574	1	Intergenic	novelGene_7669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCCAAATTTTTGTAC	NA	False	NA	NA	False	ATTAAA	-21	NA	59043556	59040982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59041000_59043600
ES.938.1	chr1	+	1050	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	-30	787	-30	5	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTCTTGCTCTTTAT	NA	False	NA	20	True	AATAAA	-20	NA	87141605	87155791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.10	chr1	+	3603	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	11	-231	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGGACTTGTCAATAC	NA	False	NA	21	True	AATAAA	-24	NA	87141671	87167979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.11	chr1	+	989	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	40	2365	15	-2365	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGTGCAGCTGTC	NA	False	NA	NA	False	NA	NA	NA	87141675	87165845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.12	chr1	+	3210	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	15	-237	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	1026.15450163437	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141675	87167973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
ES.938.13	chr1	+	1767	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	40	0	15	0	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGGTTGTCTGAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	87141675	87156578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.14	chr1	+	6201	7	ISM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	40	2596	15	-2596	intron_retention	FALSE	canonical	3	43	junction_6	899.225345629349	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGGCAGTAATCCTTT	NA	False	NA	4	True	AATACA	-23	NA	87141675	87165614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124
ES.938.15	chr1	+	3686	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	15	-237	intron_retention	FALSE	canonical	3	16	junction_7	1019.03467726539	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141675	87167973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
ES.938.16	chr1	+	1457	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	17	-2	intron_retention	FALSE	canonical	0	0	junction_4	886.246156550199	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCATGCTCTTGC	NA	False	NA	13	True	AATAAA	-13	NA	87141677	87155784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152190_87153571_87153725_87153818_87153956_87155522
ES.938.17	chr1	+	3337	9	NIC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-15	-236	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	1065.03450648324	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87141685	87167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87141742_87142067_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ES.938.18	chr1	+	1818	8	NIC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-15	-2081	intron_retention	FALSE	canonical	3	22	junction_7	1014.93826091511	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGATTCTGTGTCCT	NA	False	NA	6	True	NA	NA	NA	87141685	87166129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ES.938.19	chr1	+	3447	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-15	-240	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_7	1135.36461822911	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGCAGGCTGTGGACT	NA	False	NA	12	True	AATAAA	-15	NA	87141685	87167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142006_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ES.938.2	chr1	+	1487	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-368	0	4	0	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87141639	87155786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.20	chr1	+	3914	7	NNC	ENSMUSG00000026254.18	novel	2869	7	NA	NA	-15	473	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	911.046955735848	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAAAGTTGTTTGAGTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	87141685	87162906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87159693
ES.938.21	chr1	+	1539	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	31	-1	-9	1	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGACCCCACCTTTGCA	NA	False	NA	NA	False	AATAAA	-17	NA	87141691	87154323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ES.938.22	chr1	+	3007	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	32	-1470	-8	6	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGCTCTTGCTCTTTATG	NA	False	NA	21	True	AATAAA	-21	NA	87141692	87155792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ES.938.23	chr1	+	4037	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	57	-2287	-8	2287	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCTAGTCCTTTATTAA	NA	False	NA	NA	False	AATAAA	-43	NA	87141692	87158865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.24	chr1	+	959	7	NNC	ENSMUSG00000026254.18	novel	1807	7	NA	NA	-7	2285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	912.607390940924	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCCTAGTCCTTTATT	NA	False	NA	NA	False	AATAAA	-41	NA	87141693	87158863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87158597
ES.938.25	chr1	+	3909	7	NNC	ENSMUSG00000026254.18	novel	2869	7	NA	NA	-7	0	intron_retention	FALSE	canonical	2	5	junction_6	896.738798213963	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCGGATCCTGATTACCT	NA	False	NA	NA	False	AATAAA	-18	NA	87141693	87162433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87159693
ES.938.26	chr1	+	2122	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-7	-245	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	994.216253731387	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAAGAGAGCAGGCTGT	NA	False	NA	7	True	AATAAA	-10	NA	87141693	87167965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567_87165625_87166593
ES.938.27	chr1	+	1211	7	NNC	ENSMUSG00000026254.18	novel	1807	7	NA	NA	-4	-7	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	844.658510878805	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTTGTCTCATGCT	NA	False	NA	8	True	AATAAA	-8	NA	87141696	87155779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142006_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.29	chr1	+	2219	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-308	-792	-1	0	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGGTTGTCTGAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	87141699	87156578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.3	chr1	+	3146	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	17	231	-8	-231	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGGACTTGTCAATAC	NA	False	NA	21	True	AATAAA	-24	NA	87141652	87167979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.30	chr1	+	3651	8	NIC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	-1	-234	intron_retention	FALSE	canonical	3	22	junction_7	1014.93826091511	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGTGGACTTGTCAA	NA	False	NA	18	True	AATAAA	-21	NA	87141699	87167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ES.938.31	chr1	+	1810	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	1	-2087	intron_retention	FALSE	canonical	3	16	junction_7	1019.03467726539	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACAGCCTAGGATTCTG	NA	False	NA	0	True	NA	NA	NA	87141701	87166123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
ES.938.32	chr1	+	3147	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	-306	-1722	1	930	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTTTGGGTCCTTACAT	NA	False	NA	NA	False	NA	NA	NA	87141701	87157508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.33	chr1	+	3789	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	1	-15	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGATTTTGAACTTCT	NA	False	NA	NA	False	NA	NA	NA	87141701	87168195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.34	chr1	+	2381	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	2	-241	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1112.83201878847	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGAGCAGGCTGTGGAC	NA	False	NA	11	True	AATAAA	-14	NA	87141702	87167969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142006_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567_87165625_87166593
ES.938.35	chr1	+	3655	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	4	-234	intron_retention	FALSE	canonical	0	0	junction_3	1054.48006338747	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGTGGACTTGTCAA	NA	False	NA	18	True	AATAAA	-21	NA	87141704	87167976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148781_87152083_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
ES.938.37	chr1	+	3158	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	8	-240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1113.17483086963	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGCAGGCTGTGGACT	NA	False	NA	12	True	AATAAA	-15	NA	87141708	87167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87141742_87145399_87145477_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.38	chr1	+	6041	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	70	-4542	30	2286	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCCTAGTCCTTTATTA	NA	False	NA	NA	False	AATAAA	-42	NA	87141730	87158864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ES.938.39	chr1	+	6768	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	7	-2597	intron_retention	FALSE	canonical	2	5	junction_6	896.738798213963	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGGCAGTAATCCTT	NA	False	NA	3	True	AATACA	-22	NA	87142014	87165613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87159693
ES.938.4	chr1	+	8578	7	ISM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	24	235	-1	-235	intron_retention	FALSE	canonical	3	43	junction_6	899.225345629349	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCTGTGGACTTGTCA	NA	False	NA	17	True	AATAAA	-20	NA	87141659	87167975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124
ES.938.40	chr1	+	3451	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	372	-2254	25	-2	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCTGGGTTGTCTGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	87142032	87156576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ES.938.41	chr1	+	875	7	NIC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	26	-2597	combination_of_known_junctions	FALSE	canonical	3	212	junction_6	831.352646126914	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGGCAGTAATCCTT	NA	False	NA	3	True	AATACA	-22	NA	87142033	87165613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.42	chr1	+	1313	7	NIC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	29	-2156	combination_of_known_junctions	FALSE	canonical	3	212	junction_6	831.352646126914	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTACCGTTAAGTTATT	NA	False	NA	-69	True	NA	NA	NA	87142036	87166054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.44	chr1	+	2681	4	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	60	-237	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	465.381086374979	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87142067	87167973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147365_87153892_87153956_87165567
ES.938.45	chr1	+	1182	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	71	-2342	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	896.738798213963	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTGTTGTTTTTGTC	NA	False	NA	NA	False	NA	NA	NA	87142078	87160091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87159693
ES.938.46	chr1	+	1032	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	72	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	854.659142582585	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTTGTCTCATGCT	NA	False	NA	8	True	AATAAA	-8	NA	87142079	87155779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147310_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ES.938.47	chr1	+	1247	8	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	79	-2265	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	1019.03467726539	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGTCCGGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	87142086	87165945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
ES.938.48	chr1	+	3000	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	97	-236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1052.38070054942	758	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGGCTGTGGACTTGTC	NA	False	NA	16	True	AATAAA	-19	NA	87142104	87167974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152168_87153911_87153956_87164477_87164571_87165567
ES.938.49	chr1	+	3050	6	ISM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	5665	240	5293	-240	3prime_fragment	FALSE	canonical	3	212	junction_5	846.164381193158	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGCAGGCTGTGGACT	NA	False	NA	12	True	AATAAA	-15	NA	87147300	87167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.5	chr1	+	1353	7	NNC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	4	-2	intron_retention	FALSE	canonical	3	26	junction_6	890.019600283549	717	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCATGCTCTTGC	NA	False	NA	13	True	AATAAA	-13	NA	87141664	87155784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155629
ES.938.50	chr1	+	4352	2	ISM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	16616	243	16244	-243	3prime_fragment	FALSE	canonical	3	22	junction_1	0	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGAGCAGGCTGTGG	NA	False	NA	9	True	AATAAA	-12	NA	87158251	87167967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87160204_87165567
ES.938.51	chr1	+	2533	2	NNC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	21232	-240	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGCAGGCTGTGGACT	NA	False	NA	12	True	AATAAA	-15	NA	87163239	87167970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87163370_87165567
ES.938.6	chr1	+	1283	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	30	2081	5	-2081	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGATTCTGTGTCCT	NA	False	NA	6	True	NA	NA	NA	87141665	87166129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ES.938.8	chr1	+	3201	8	FSM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	35	237	10	-237	multi-exon	FALSE	canonical	3	22	junction_7	1022.13094732005	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141670	87167973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ES.938.9	chr1	+	2544	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113232.8	1125	6	36	-1455	11	-2	multi-exon	FALSE	canonical	3	965	junction_1	545.938677875089	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTCTCATGCTCTTGC	NA	False	NA	13	True	AATAAA	-13	NA	87141671	87155784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ES.9380.1	chr13	-	2295	4	Antisense	novelGene_ENSMUSG00000055254.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACAGAGAGTGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	59059872	59045822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_59047614_59056775_59056897_59058134_59058376_59059730
ES.9381.1	chr13	-	174	1	Intergenic	novelGene_7670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGAATCACTC	NA	False	NA	NA	False	NA	NA	NA	59086279	59086105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59086100_59086300
ES.9382.1	chr13	-	174	1	Intergenic	novelGene_7671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATATCTCTCAGTG	9063	False	NA	NA	False	NA	NA	NA	59548300	59548126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59548100_59548300
ES.9383.1	chr13	-	4545	1	Genic_Genomic	ENSMUSG00000021557.16	novel	NA	NA	NA	NA	-57	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCTTGTTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	59598099	59593554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_59593600_59598100
ES.9383.10	chr13	-	1515	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	-3303	26	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	9.16429893663449	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCATTTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	59625698	59597782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625609
ES.9383.11	chr13	-	1994	12	NIC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	13891	24	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	8.68740895665476	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGGCATTTGTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	59648077	59597784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59643146_59643296_59643376_59643464_59644789_59644874_59647827
ES.9383.12	chr13	-	3971	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	-27	4230	9	23	multi-exon	FALSE	canonical	2	7	junction_25	6.92242731995071	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGGCATTTGTTTTA	1028	False	NA	NA	False	AATAAA	-19	NA	59705152	59597785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.13	chr13	-	4080	22	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	12361	7	1112	-7	3prime_fragment	FALSE	canonical	3	4	junction_1	7.56948163048138	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGCCTTGTGCCCAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	59679892	59601670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59602495_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826
ES.9383.14	chr13	-	3597	18	FSM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	-15	-703	-1	703	multi-exon	FALSE	canonical	2	4	junction_1	6.94416685335233	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGTATTTATGTGCTT	1065	False	NA	NA	False	ATTAAA	-12	NA	59705115	59640510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.15	chr13	-	3435	18	FSM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	10	-566	3	566	multi-exon	FALSE	canonical	2	4	junction_1	6.94416685335233	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGTGTAGCAGTGT	1090	False	NA	NA	False	AATAAA	-15	NA	59705090	59640647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.16	chr13	-	3749	19	NNC	ENSMUSG00000021557.16	novel	3037	18	NA	NA	1	565	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	8.77848098449052	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTAGCAGTG	1081	False	NA	NA	False	AATAAA	-14	NA	59705099	59640648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59683591_59683773_59684062_59684188_59692200_59692266_59704911
ES.9383.17	chr13	-	3550	18	FSM	ENSMUSG00000021557.16	ENSMUST00000171606.9	3037	18	3	-516	3	516	multi-exon	FALSE	canonical	2	4	junction_1	7.14554571249893	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTTGTATCGTGGGT	1050	False	NA	NA	False	AAGAAA	-5	NA	59705130	59640697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59704911
ES.9383.18	chr13	-	3252	17	NIC	ENSMUSG00000021557.16	novel	3037	18	NA	NA	0	465	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	8.39270516579726	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTAATGTAGTGTTTTT	1047	False	NA	NA	False	ATTAAA	-45	NA	59705133	59640748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59692200_59692266_59705036
ES.9383.19	chr13	-	3010	18	FSM	ENSMUSG00000021557.16	ENSMUST00000171606.9	3037	18	31	-4	1	4	multi-exon	FALSE	canonical	2	4	junction_1	7.14554571249893	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACTTTATGCATATG	1078	False	NA	NA	False	ATTAAA	-23	NA	59705102	59641209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59704911
ES.9383.2	chr13	-	4554	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	-172	3792	-136	3	multi-exon	FALSE	canonical	2	7	junction_25	6.92242731995071	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATCTTTTTA	883	False	NA	0	True	AATAAA	-20	NA	59705297	59597347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.20	chr13	-	3044	18	FSM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	-172	7	-111	-7	multi-exon	FALSE	canonical	2	4	junction_1	6.94416685335233	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAGGCTTATTTGACT	908	False	NA	NA	False	ATTAAA	-12	NA	59705272	59641220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.21	chr13	-	3662	3	ISM	ENSMUSG00000021557.16	ENSMUST00000167593.8	1024	10	37361	-1037	-5796	11	3prime_fragment	FALSE	canonical	3	17	junction_2	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCATTTTTTGAATCT	8020	False	NA	NA	False	AATAAA	-23	NA	59667764	59659160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59660316_59661900_59662110_59665466
ES.9383.3	chr13	-	5030	1	NIC	ENSMUSG00000021557.16	novel	8174	26	NA	NA	-4336	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	59602378	59597348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59597300_59602400
ES.9383.4	chr13	-	1971	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	-3320	2	intron_retention	FALSE	canonical	2	7	junction_8	8.08451451851006	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	59625715	59597348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625604
ES.9383.5	chr13	-	2803	6	NNC	ENSMUSG00000021557.16	novel	4331	25	NA	NA	-3319	2	intron_retention	FALSE	canonical	0	0	junction_1	11.6619037896906	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	59616421	59597348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59599436_59602348_59602495_59608282_59608444_59609810_59609988_59613798_59613931_59616321
ES.9383.6	chr13	-	4392	25	NIC	ENSMUSG00000021557.16	novel	8174	26	NA	NA	-136	2	intron_retention	FALSE	canonical	2	7	junction_24	6.95708571649557	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTTGTCATCTTTTT	883	False	NA	-1	True	AATAAA	-19	NA	59705297	59597348	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59598129_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9383.7	chr13	-	2014	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	3356	-1	intron_retention	FALSE	canonical	0	0	junction_8	10.0124921972504	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTCTCTTGTCATCTT	NA	False	NA	-4	True	AATAAA	-16	NA	59625796	59597351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625639
ES.9383.9	chr13	-	4219	24	NIC	ENSMUSG00000021557.16	novel	8174	26	NA	NA	-3	-5	intron_retention	FALSE	canonical	0	0	junction_8	8.92798323744454	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCATTTCTCTTGTCA	1084	False	NA	-8	True	AATAAA	-12	NA	59705096	59597355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ES.9384.1	chr13	+	178	1	Intergenic	novelGene_7672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGAATTATG	2380	False	NA	NA	False	NA	NA	NA	59714663	59714841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59714700_59714800
ES.9385.1	chr13	+	158	1	Intergenic	novelGene_7673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	59722518	59722676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59722500_59722700
ES.9386.1	chr13	-	826	2	FSM	ENSMUSG00000021557.16	ENSMUST00000163284.2	3158	2	42	2290	26	-2290	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGGTGTCTAAATATAC	NA	False	NA	NA	False	GATAAA	-17	NA	59732999	59730279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59731045_59732938
ES.9387.1	chr13	+	2542	23	NIC	ENSMUSG00000021555.16	novel	1207	14	NA	NA	-4	46	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	172.373441416551	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1170	False	NA	67	True	AATAAA	-29	NA	59733068	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733107_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.10	chr13	+	2509	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	26	27	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	166.929262518012	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1236	False	NA	48	True	AATAAA	-10	NA	59733134	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.11	chr13	+	2691	24	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	26	46	combination_of_known_junctions	FALSE	canonical	3	14	junction_14	220.934174049104	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1236	False	NA	67	True	AATAAA	-29	NA	59733134	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59766044_59766093_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.12	chr13	+	2608	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	27	46	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	174.275253394101	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1237	False	NA	67	True	AATAAA	-29	NA	59733135	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.13	chr13	+	522	5	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	-72	8983	27	44	5prime_fragment	FALSE	canonical	3	670	junction_1	98.3234458305851	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGGCCTACCTGATT	1237	False	NA	NA	False	AATAAA	-20	NA	59733135	59747648	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542
ES.9387.14	chr13	+	2667	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-41	27	intron_retention	FALSE	canonical	3	649	junction_6	71.2517175669178	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1268	False	NA	48	True	AATAAA	-10	NA	59733166	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.15	chr13	+	2594	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-36	46	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	173.406439870121	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1273	False	NA	67	True	AATAAA	-29	NA	59733171	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59755998_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.16	chr13	+	5911	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-16	27	intron_retention	FALSE	canonical	3	649	junction_5	70.6282344392099	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1293	False	NA	48	True	AATAAA	-10	NA	59733191	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59780843_59782231
ES.9387.17	chr13	+	4865	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-15	46	intron_retention	FALSE	canonical	3	649	junction_6	70.11800872381	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1294	False	NA	67	True	AATAAA	-29	NA	59733192	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.19	chr13	+	2556	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-13	46	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	172.547106994674	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1296	False	NA	67	True	AATAAA	-29	NA	59733194	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748859_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.2	chr13	+	2595	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-10	46	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	170.857036683091	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1200	False	NA	67	True	AATAAA	-29	NA	59733098	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.20	chr13	+	2585	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-13	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	174.862706105089	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1296	False	NA	67	True	AATAAA	-29	NA	59733194	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734100_59745821_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.21	chr13	+	6433	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-11	46	intron_retention	FALSE	canonical	3	649	junction_6	71.8340274521762	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1298	False	NA	67	True	AATAAA	-29	NA	59733196	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.24	chr13	+	2396	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-5	46	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	177.250402581826	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1304	False	NA	67	True	AATAAA	-29	NA	59733202	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.25	chr13	+	2121	17	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-4	447	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	294.668716262433	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTTTATTTGCAACT	1305	False	NA	NA	False	AATAAA	-13	NA	59733203	59773925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59766044_59766093_59770679_59770747_59772318_59772418_59773232
ES.9387.26	chr13	+	2469	21	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	182.233778427601	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1306	False	NA	48	True	AATAAA	-10	NA	59733204	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756124_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.27	chr13	+	3673	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	intron_retention	FALSE	canonical	3	649	junction_5	71.7121355524121	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.28	chr13	+	2323	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	186.494353920759	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.29	chr13	+	2447	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	177.68220503583	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1306	False	NA	48	True	AATAAA	-10	NA	59733204	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.3	chr13	+	2678	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	-9	1124	-9	46	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1201	False	NA	67	True	AATAAA	-29	NA	59733099	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.30	chr13	+	2598	24	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	224.21120713833	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAGTGAAATAGTG	1306	False	NA	1	True	NA	NA	NA	59733204	59782546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59735945_59736037_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.32	chr13	+	2431	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	225.50436290031	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59747542_59747618_59748717_59748859_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.33	chr13	+	2562	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	173.772721327848	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755212_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.34	chr13	+	6708	19	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-3	46	intron_retention	FALSE	canonical	0	0	junction_10	191.851834870584	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1306	False	NA	67	True	AATAAA	-29	NA	59733204	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59760630_59764557_59764618_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.35	chr13	+	1562	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	97	26916	-2	189	intron_retention	FALSE	canonical	3	649	junction_6	91.2269662709442	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTTTTCTTGGATTC	1307	False	NA	NA	False	ATTAAA	-14	NA	59733205	59756820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958
ES.9387.37	chr13	+	2337	21	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	236.206451012668	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1307	False	NA	48	True	AATAAA	-10	NA	59733205	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59770704_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.39	chr13	+	2312	20	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	186.494353920759	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1307	False	NA	67	True	AATAAA	-29	NA	59733205	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755236_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.40	chr13	+	2339	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	46	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	241.452460866991	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1307	False	NA	67	True	AATAAA	-29	NA	59733205	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.41	chr13	+	2459	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	225.477191127663	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1307	False	NA	67	True	AATAAA	-29	NA	59733205	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756666_59757297_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.42	chr13	+	2527	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	46	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	172.648193620236	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1307	False	NA	67	True	AATAAA	-29	NA	59733205	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773277_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.43	chr13	+	2819	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2	46	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	228.944140569559	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1307	False	NA	67	True	AATAAA	-29	NA	59733205	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733605_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.44	chr13	+	2546	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-1	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	172.791256091905	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1308	False	NA	48	True	AATAAA	-10	NA	59733206	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777949_59778394_59778518_59780761_59780843_59782231
ES.9387.45	chr13	+	2153	17	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	98	9812	-1	446	5prime_fragment	FALSE	canonical	3	649	junction_6	71.965025142426	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATCTTTTATTTGCAAC	1308	False	NA	NA	False	AATAAA	-12	NA	59733206	59773924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
ES.9387.46	chr13	+	404	3	NNC	ENSMUSG00000021555.16	novel	779	10	NA	NA	0	-13147	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	328.5	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACGGATGTTGGCGATT	1309	False	NA	NA	False	NA	NA	NA	59733207	59734457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59734248
ES.9387.47	chr13	+	1592	16	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	1	-1192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	202.313771706778	514	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGGGGAAATATACAGA	1310	False	NA	NA	False	AATAAA	-22	NA	59733208	59771139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59770907
ES.9387.48	chr13	+	2610	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	1	46	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_18	172.915620993221	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1310	False	NA	67	True	AATAAA	-29	NA	59733208	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775870_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.49	chr13	+	5477	3	NNC	ENSMUSG00000021555.16	novel	2051	8	NA	NA	2	-8072	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	328.5	484	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGATTTAAGCTTTTC	1311	False	NA	NA	False	NA	NA	NA	59733209	59739532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59734248
ES.9387.5	chr13	+	2470	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	46	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	180.040682902504	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1210	False	NA	67	True	AATAAA	-29	NA	59733108	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.50	chr13	+	2433	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3	27	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	177.865193927548	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1312	False	NA	48	True	AATAAA	-10	NA	59733210	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.51	chr13	+	2537	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	173.464050625783	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGACAAAAAAAAAAAAAAAA	1312	False	NA	44	True	AATAAA	-6	NA	59733210	59782589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780836_59782231
ES.9387.52	chr13	+	2526	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3	46	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	177.169890410383	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1312	False	NA	67	True	AATAAA	-29	NA	59733210	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59765714_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.54	chr13	+	2506	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	4	46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	177.169890410383	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1313	False	NA	67	True	AATAAA	-29	NA	59733211	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.56	chr13	+	2188	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	4	46	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	185.485870918109	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1313	False	NA	67	True	AATAAA	-29	NA	59733211	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.58	chr13	+	6808	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	4	46	intron_retention	FALSE	canonical	3	649	junction_6	75.0687957790918	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1313	False	NA	67	True	AATAAA	-29	NA	59733211	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.59	chr13	+	3610	6	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	4	4719	4	3835	5prime_fragment	FALSE	canonical	3	670	junction_1	88.4655865294522	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGGTTGTTT	1313	False	NA	NA	False	AATAAA	-3	NA	59733211	59751912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717
ES.9387.6	chr13	+	3861	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	7	46	intron_retention	FALSE	canonical	3	649	junction_6	73.5826066404283	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1217	False	NA	67	True	AATAAA	-29	NA	59733115	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.61	chr13	+	3208	17	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	104	8751	5	-462	5prime_fragment	FALSE	canonical	3	649	junction_6	71.965025142426	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATCTTTGGTTTTTAAT	1314	False	NA	NA	False	CATAAA	-7	NA	59733212	59774985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232
ES.9387.64	chr13	+	2686	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	6	46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	173.140391131943	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1315	False	NA	67	True	AATAAA	-29	NA	59733213	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733844_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.65	chr13	+	9040	15	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	6	447	intron_retention	FALSE	non_canonical	0	0	junction_6	209.015671710061	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTTTATTTGCAACT	1315	False	NA	NA	False	AATAAA	-13	NA	59733213	59773925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59752808_59753735_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59772418_59773232
ES.9387.67	chr13	+	6167	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	9	46	intron_retention	FALSE	canonical	2	5	junction_10	283.429619183442	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1318	False	NA	67	True	AATAAA	-29	NA	59733216	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59764557_59764618_59765733_59765841_59766044_59766093_59770679_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.7	chr13	+	3199	6	ISM	ENSMUSG00000021555.16	ENSMUST00000166923.9	779	10	-83	5217	16	3337	5prime_fragment	FALSE	canonical	3	670	junction_1	88.4655865294522	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATACTAGCAATTTCTGC	1226	False	NA	NA	False	NA	NA	NA	59733124	59751414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717
ES.9387.70	chr13	+	1762	18	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	112	7909	-13	58	5prime_fragment	FALSE	canonical	3	649	junction_6	72.4765562859651	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTAGACCGCCTGAG	1322	False	NA	NA	False	AAAAAG	-4	NA	59733220	59775827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691
ES.9387.71	chr13	+	4775	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-13	-10	intron_retention	FALSE	non_canonical	0	0	junction_10	176.198609850869	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGTGTTTGTAAAGG	1322	False	NA	11	True	AATGAA	-9	NA	59733220	59782556	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756653_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.73	chr13	+	3434	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-8	27	intron_retention	FALSE	canonical	3	11	junction_8	184.044436402291	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1327	False	NA	48	True	AATAAA	-10	NA	59733225	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.74	chr13	+	2548	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-5	27	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	173.219179935481	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1330	False	NA	48	True	AATAAA	-10	NA	59733228	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773214_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.76	chr13	+	2345	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	10	25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	176.451145654317	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	1345	False	NA	46	True	AATAAA	-8	NA	59733243	59782591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.77	chr13	+	2843	21	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	22	46	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	238.471151295078	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1357	False	NA	67	True	AATAAA	-29	NA	59733255	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733794_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.78	chr13	+	2806	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	31	27	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	230.591677087336	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1366	False	NA	48	True	AATAAA	-10	NA	59733264	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733605_59733966_59734111_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.79	chr13	+	4494	25	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	31	27	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	289.14283943619	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1366	False	NA	48	True	AATAAA	-10	NA	59733264	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733605_59733966_59734096_59734248_59735827_59735945_59736037_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.8	chr13	+	2636	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	24	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	173.787368893072	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1234	False	NA	67	True	AATAAA	-29	NA	59733132	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756583_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.80	chr13	+	2844	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	31	46	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	170.650075731326	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1366	False	NA	67	True	AATAAA	-29	NA	59733264	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733605_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.81	chr13	+	3028	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	36	46	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	171.224177639329	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1371	False	NA	67	True	AATAAA	-29	NA	59733269	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733794_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.82	chr13	+	3004	22	NNC	ENSMUSG00000021555.16	novel	1207	14	NA	NA	50	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.009771956143	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	1385	False	NA	67	True	AATAAA	-29	NA	59733283	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733794_59733966_59734096_59745829_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.84	chr13	+	2372	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-19	27	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	170.754875479443	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	303	False	NA	48	True	AATAAA	-10	NA	59733964	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59734096_59743162_59743197_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.85	chr13	+	2274	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-12	27	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	177.805147169903	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	9499	False	NA	48	True	AATAAA	-10	NA	59743160	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.86	chr13	+	3205	15	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2775	46	intron_retention	FALSE	canonical	0	0	junction_6	201.971216882455	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	NA	False	NA	67	True	AATAAA	-29	NA	59754295	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59755127_59755201_59755246_59755958_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.87	chr13	+	229	1	ISM	ENSMUSG00000021555.16	ENSMUST00000225670.2	2051	8	22938	862	-899	-231	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCATAGCTTCTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	59756171	59756400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59756200_59756400
ES.9387.88	chr13	+	7016	10	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	13	25	intron_retention	FALSE	canonical	0	0	junction_2	243.570255030869	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	46	True	AATAAA	-8	NA	59757208	59782591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59760630_59764557_59764618_59770679_59770747_59772318_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.9	chr13	+	2575	22	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	25	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	277.661599287371	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	1235	False	NA	46	True	AATAAA	-8	NA	59733133	59782591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59770679_59770747_59772318_59772418_59773214_59773412_59775691_59775870_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.90	chr13	+	3638	9	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	35155	1178	2488	-8	3prime_fragment	FALSE	canonical	3	668	junction_4	55.2707822904652	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGTTTGTAAAGGTT	NA	False	NA	13	True	AATGAA	-11	NA	59768263	59782558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.91	chr13	+	4608	8	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	3143	27	intron_retention	FALSE	canonical	2	3	junction_1	278.721937362933	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	48	True	AATAAA	-10	NA	59768918	59782593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59772418_59773214_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.92	chr13	+	5864	7	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2335	25	intron_retention	FALSE	canonical	3	668	junction_2	57.8237263874729	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	46	True	AATAAA	-8	NA	59769922	59782591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59772418_59773232_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ES.9387.93	chr13	+	4311	1	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	-2237	46	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCTGTGGAGAACTAG	7773	False	NA	67	True	AATAAA	-29	NA	59778301	59782612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59778300_59782600
ES.9388.1	chr13	+	529	4	Intergenic	novelGene_7675	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGACCTCTGCTCCTTT	4019	False	NA	NA	False	NA	NA	NA	59827326	59838541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59827414_59837653_59837779_59838124_59838204_59838303
ES.9388.2	chr13	+	186	2	Intergenic	novelGene_7676	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAAGAGTTTGA	5161	False	NA	NA	False	NA	NA	NA	59828468	59828707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59828548_59828600
ES.9389.1	chr13	-	5409	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	32	-1487	1	1487	multi-exon	TRUE	canonical	3	421	junction_9	46.3947102135844	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAGGAAAAGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	59823593	59780952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.10	chr13	-	3396	9	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	11203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.578244509668	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59812383	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59812336
ES.9389.11	chr13	-	3552	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	161.50954564153	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823584	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786236_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.12	chr13	-	3343	8	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	24765	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	175.817159200653	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59798821	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59798647
ES.9389.13	chr13	-	3194	8	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	24765	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	207.762816103128	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59798821	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59798791
ES.9389.14	chr13	-	4603	9	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-3633	0	intron_retention	FALSE	canonical	3	16	junction_8	166.993590820127	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59827258	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
ES.9389.15	chr13	-	3392	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.469932349309	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823592	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59784015_59784173_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.16	chr13	-	5124	7	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	19915	0	intron_retention	FALSE	canonical	0	0	junction_6	222.489512861468	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	5877	False	NA	-5	True	AATAAA	-22	NA	59803671	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59803612
ES.9389.17	chr13	-	3735	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	204.170908799466	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823577	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59815174_59815374_59823540
ES.9389.18	chr13	-	3573	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.100816887331	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823593	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793058_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.19	chr13	-	3559	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	161.50954564153	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823602	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786221_59787929_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.2	chr13	-	3922	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	32	0	1	0	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCATCCTCTCTAGGT	NA	False	NA	NA	False	AATAAA	-16	NA	59823593	59782439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.21	chr13	-	3674	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	204.367536560971	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823594	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822127_59822249_59823540
ES.9389.22	chr13	-	3680	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	9	0	1	0	multi-exon	FALSE	canonical	3	5	junction_10	200.252240936275	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823585	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
ES.9389.23	chr13	-	3446	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	193.234138026296	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823598	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59788039_59788156_59790056_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.25	chr13	-	3440	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	154.469932349309	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823572	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812061_59812151_59812192_59813340_59813491_59823540
ES.9389.26	chr13	-	3456	9	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3612	-1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	220.25918681181	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTAGGGTTGTTTGGTG	NA	False	NA	-6	True	AATAAA	-21	NA	59827237	59782810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
ES.9389.27	chr13	-	3635	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-4937	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	162.010973565236	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59828562	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59828424
ES.9389.29	chr13	-	3366	9	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-6	-2	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	169.338234017011	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59823631	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59785216_59786118_59786227_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.3	chr13	-	4051	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-3639	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	154.469932349309	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTTTAAGACACAATCT	NA	False	NA	9	True	AATAAA	-36	NA	59827264	59782795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540_59823872_59827057
ES.9389.30	chr13	-	3763	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3552	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.611807203047	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59827177	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785362_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
ES.9389.32	chr13	-	7161	8	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	421	junction_7	45.3359342991353	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59823596	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59785216_59786118_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.37	chr13	-	3960	6	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	24419	-2	intron_retention	FALSE	canonical	2	5	junction_5	252.95485763274	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59799167	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59786227_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59799055
ES.9389.38	chr13	-	3521	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	162.510854338342	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTAGGGTTGTTTGGT	NA	False	NA	-7	True	AATAAA	-20	NA	59823573	59782811	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790193_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.4	chr13	-	3241	8	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	24459	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	175.476261549381	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59799127	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59799055
ES.9389.41	chr13	-	3585	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	159.654488053282	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTAGGGTTGTTTG	NA	False	NA	-9	True	AATAAA	-18	NA	59823597	59782813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797513_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.42	chr13	-	3222	8	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	19912	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	207.762816103128	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTAGGGTTGTTTG	5874	False	NA	-9	True	AATAAA	-18	NA	59803674	59782813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59803612
ES.9389.45	chr13	-	3674	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	204.170908799466	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTTTTAGGGTTGTT	NA	False	NA	-11	True	AATAAA	-16	NA	59823638	59782815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59820187_59820271_59823540
ES.9389.46	chr13	-	3406	8	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	11	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	167.364809896934	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCAAGTTTTAGGGTT	NA	False	NA	-14	True	AATAAA	-13	NA	59823614	59782818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59812011_59812192_59813340_59813491_59823540
ES.9389.47	chr13	-	2726	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	10	1218	10	-848	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGCTGTGCTGATTTC	NA	False	NA	NA	False	TTTAAA	-14	NA	59823615	59783657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.48	chr13	-	1986	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	11	1957	11	-1587	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTATGGTCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	59823614	59784396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.49	chr13	-	1768	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	32	2154	1	-1784	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAAGGCTGAGGCAGGAG	NA	False	NA	NA	False	ATTAAA	-33	NA	59823593	59784593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.5	chr13	-	3699	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-3632	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	157.741779931008	648	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59827257	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
ES.9389.50	chr13	-	1468	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	32	2454	1	-2084	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGAAATGAGGCTGT	NA	False	NA	88	True	NA	NA	NA	59823593	59784893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.51	chr13	-	1570	10	NNC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	-3637	-2134	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	157.741779931008	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGATCAAGCTTTGAT	NA	False	NA	38	True	TTTAAA	-19	NA	59827262	59784943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59827057
ES.9389.52	chr13	-	2381	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	19900	-2181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	243.787222798899	605	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGACAGTTTGGGGGT	5862	False	NA	-9	True	AAGAAA	-14	NA	59803686	59784990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59801399_59801572_59801808_59802094_59802609_59802723_59802863
ES.9389.53	chr13	-	227	1	Intergenic	novelGene_7674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATTTGCAGTTGGAAG	NA	False	NA	NA	False	NA	NA	NA	59826230	59826003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59826000_59826200
ES.9389.6	chr13	-	3225	6	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	30071	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	186.3079171694	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	3303	False	NA	-5	True	AATAAA	-22	NA	59793515	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59793301
ES.9389.7	chr13	-	5470	9	NIC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	15	0	intron_retention	FALSE	canonical	3	421	junction_8	42.4100150318295	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823610	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59785216_59786118_59786227_59787933_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.8	chr13	-	3455	11	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	154.469932349309	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823596	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59783916_59784015_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ES.9389.9	chr13	-	3432	10	NNC	ENSMUSG00000021556.13	novel	3689	11	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_9	194.858923326595	643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823584	59782809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797475_59798509_59798565_59812011_59812192_59813340_59813385_59823540
ES.939.1	chr1	-	906	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGCTTTTTGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	87170150	87169244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87169200_87170200
ES.939.2	chr1	-	173	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	87169602	87169429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87169400_87169600
ES.9390.1	chr13	-	6594	4	NNC	ENSMUSG00000050876.10	novel	5325	5	NA	NA	-427	27	intron_retention	FALSE	canonical	0	0	junction_2	5.43650214343336	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAACAGGACTCAAG	NA	False	NA	NA	False	NA	NA	NA	59858571	59847592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59852903_59853778_59854706_59858067_59858145_59858291
ES.9390.3	chr13	-	6054	3	NIC	ENSMUSG00000050876.10	novel	4261	4	NA	NA	-932	1	intron_retention	FALSE	canonical	1	1	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGAGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	59854943	59847895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59851837_59851954_59852903_59853778
ES.9390.4	chr13	-	5875	6	NNC	ENSMUSG00000050876.10	novel	5325	5	NA	NA	-432	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.01996015920445	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTGTGAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	59858576	59847896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59851837_59851954_59852016_59852859_59852903_59853765_59855235_59858067_59858145_59858291
ES.9390.5	chr13	-	4016	3	FSM	ENSMUSG00000050876.10	ENSMUST00000224469.2	1616	3	199	-2599	183	-1	multi-exon	FALSE	canonical	1	1	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGTGAGTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	59853812	59847897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59851837_59852859_59852903_59853778
ES.9390.6	chr13	-	625	3	NNC	ENSMUSG00000050876.10	novel	5325	5	NA	NA	-432	-1879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATGCTCTAACAT	NA	False	NA	NA	False	AATACA	-38	NA	59858576	59854442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59854706_59858067_59858145_59858291
ES.9390.7	chr13	-	3272	2	NNC	ENSMUSG00000050876.10	novel	5325	5	NA	NA	-444	-2606	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCCTCCAAAGCTTTTC	NA	False	NA	NA	False	NA	NA	NA	59858588	59855169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59858145_59858291
ES.9391.1	chr13	+	4316	3	NIC	ENSMUSG00000091311.4	novel	4287	4	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTTGTGCACTTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	59860028	59867109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_59860315_59861948_59862010_59863140
ES.9391.2	chr13	+	4349	4	FSM	ENSMUSG00000091311.4	ENSMUST00000165133.3	4287	4	-63	1	-63	-1	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTTCTTGTGCACTTTG	NA	False	NA	NA	False	AGTAAA	-13	NA	59860034	59867108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_59860315_59861449_59861490_59861948_59862010_59863140
ES.9391.3	chr13	+	5958	4	FSM	ENSMUSG00000091311.4	ENSMUST00000165133.3	4287	4	-33	-1638	-33	1638	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAAATTGCTTCCTAA	NA	False	NA	NA	False	NA	NA	NA	59860064	59868747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_59860315_59861449_59861490_59861948_59862010_59863140
ES.9392.1	chr13	-	1485	1	ISM	ENSMUSG00000043986.6	ENSMUST00000052978.6	3827	4	4336	7	4336	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAATGTCTTTTGTGTG	NA	False	NA	NA	False	AATAAA	-10	NA	59875230	59873745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59873700_59875200
ES.9393.1	chr13	+	2342	1	Antisense	novelGene_ENSMUSG00000043986.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGCCTATCTTTAT	342	False	NA	NA	False	NA	NA	NA	59876392	59878734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_59876400_59878700
ES.9394.1	chr13	+	675	4	NNC	ENSMUSG00000097502.3	novel	1348	3	NA	NA	898	10918	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.24721912892465	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAGAAGAGA	6311	False	NA	NA	False	NA	NA	NA	59882361	59897917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59882455_59882560_59882653_59883769_59883952_59897609
ES.9395.1	chr13	+	1885	1	Intergenic	novelGene_7677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGAGCCCATGTTCACCT	NA	False	NA	NA	False	NA	NA	NA	59899323	59901208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59899300_59901200
ES.9396.1	chr13	+	1847	2	Antisense	novelGene_ENSMUSG00000035248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTGGATGGGAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	59937241	59939410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_59937340_59937661
ES.9396.2	chr13	+	2138	1	Antisense	novelGene_ENSMUSG00000035248.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59937241	59939379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_59937200_59939400
ES.9396.3	chr13	+	3635	20	Antisense	novelGene_ENSMUSG00000035248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCCCGGCTCCTCACCG	NA	False	NA	NA	False	NA	NA	NA	59937241	59970926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_59937340_59937661_59937755_59939592_59939694_59942259_59942325_59944638_59944737_59945485_59945571_59946811_59946963_59947454_59948531_59949829_59950009_59953034_59953190_59955859_59955982_59957192_59957322_59958386_59958455_59959328_59959381_59962679_59962775_59963366_59963541_59964087_59964202_59964471_59964659_59969376_59969938_59970894
ES.9397.1	chr13	-	809	4	NNC	ENSMUSG00000114763.2	novel	343	3	NA	NA	12461	21473	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	197.525244518827	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTATTGGTTAAGAACC	NA	False	NA	NA	False	ATTAAA	-29	NA	59917598	59885275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59885764_59906703_59906810_59910555_59910610_59917437
ES.9397.10	chr13	-	3795	3	NIC	ENSMUSG00000044792.8	novel	1942	4	NA	NA	2	-4	intron_retention	FALSE	canonical	3	417	junction_2	2	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCCTAGTGGTTCCTTT	NA	False	NA	-6	True	ATTAAA	-14	NA	59917600	59903231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59906810_59910555_59910610_59917437
ES.9397.11	chr13	-	583	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	39	1320	5	33	multi-exon	FALSE	canonical	3	417	junction_3	1.63299316185545	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAGCCAATGTGGGA	NA	False	NA	NA	False	AATAAA	-13	NA	59917585	59904542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
ES.9397.12	chr13	-	6545	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	12	337	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTACATTTTGATTC	NA	False	NA	NA	False	ATTAAA	-34	NA	59970916	59919037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.13	chr13	-	6217	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	26.9885193649965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTTGTGCAACCGGGG	NA	False	NA	NA	False	AATAAA	-19	NA	59970914	59919376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970446
ES.9397.14	chr13	-	5860	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	-3	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGTTGTGCAACCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	59970914	59919377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
ES.9397.15	chr13	-	5930	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	40.718781961026	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATGGGTTGTGCAAC	NA	False	NA	NA	False	AATAAA	-14	NA	59970910	59919381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964655_59969373_59969938_59970789
ES.9397.16	chr13	-	5798	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-2	-9	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACTCATGGGTTGTGCA	NA	False	NA	NA	False	AATAAA	-12	NA	59970963	59919383	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.17	chr13	-	5593	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-85	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	26.9885193649965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTATTTTCTTATGA	NA	False	NA	1	True	AATAAA	-26	NA	59971046	59919684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.18	chr13	-	6033	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	37.5239209419424	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970927	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.19	chr13	-	5908	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	26.9885193649965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970918	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970446
ES.9397.2	chr13	-	3500	4	Fusion	ENSMUSG00000114763.2_ENSMUSG00000051054.5	novel	343	3	NA	NA	12462	-1	multi-exon	FALSE	canonical	0	0	junction_1	197.525244518827	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGAGTGCTCTGTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	59917597	59888656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_59891837_59906703_59906810_59910555_59910610_59917437
ES.9397.20	chr13	-	5516	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970987	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.21	chr13	-	5387	26	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	34.822980917779	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970934	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.22	chr13	-	5968	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	36.0912576003035	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970914	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970446
ES.9397.23	chr13	-	5556	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970922	59919689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
ES.9397.24	chr13	-	5568	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	26.9885193649965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATCCACATTATTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	59970922	59919690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970789
ES.9397.25	chr13	-	2706	1	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6037	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59922397	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59919700_59922400
ES.9397.27	chr13	-	6063	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	39.5458095914273	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59970912	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59948909_59949073_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970446
ES.9397.28	chr13	-	5609	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-1	-2	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	36.439174566292	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59970962	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59950805_59950926_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.29	chr13	-	5889	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	-2	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59970914	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.3	chr13	-	6245	1	FSM	ENSMUSG00000051054.5	ENSMUST00000055343.3	795	1	-4337	-1113	-335	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGAGTGCTCTGTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	59894901	59888656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59888700_59894900
ES.9397.30	chr13	-	5519	28	FSM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	33	317	0	-2	multi-exon	FALSE	canonical	3	16	junction_2	33.5472559435836	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59970928	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.31	chr13	-	5849	29	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	7	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	46.3784757210075	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATCCACATTATTTT	NA	False	NA	-6	True	AATAAA	-19	NA	59970921	59919691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59948909_59949073_59949829_59950011_59950805_59950926_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970789
ES.9397.32	chr13	-	5319	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	34.1970447527631	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970924	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964640_59969503_59969938_59970894
ES.9397.33	chr13	-	5622	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.0229256012057	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970927	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
ES.9397.34	chr13	-	5524	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	36.0912576003035	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970921	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.36	chr13	-	5634	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	36.0912576003035	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970926	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970789
ES.9397.37	chr13	-	5895	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	30.2646120999779	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970925	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964656_59969379_59969925_59970446
ES.9397.38	chr13	-	5645	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-29	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	38.2965070075535	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970990	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.39	chr13	-	6031	29	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	40.382529941669	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970915	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970446
ES.9397.4	chr13	-	6380	5	NNC	ENSMUSG00000044792.8	novel	1942	4	NA	NA	4	4679	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	181.437833706204	160	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGCAAAAATGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59917586	59898543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59899744_59899946_59904818_59906703_59906810_59910555_59910610_59917437
ES.9397.40	chr13	-	5674	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	1	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	37.0824371213266	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970914	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
ES.9397.41	chr13	-	6777	26	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-5	1	intron_retention	FALSE	canonical	3	25	junction_25	23.4297588549264	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970952	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.42	chr13	-	5589	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	11	1	intron_retention	FALSE	canonical	3	16	junction_2	33.800406145804	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970917	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.43	chr13	-	5968	28	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	46.7851523467621	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATCCACATTATTT	NA	False	NA	-7	True	AATAAA	-18	NA	59970927	59919692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59926565_59926630_59929831_59930158_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59950805_59950921_59953032_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.44	chr13	-	5153	16	NNC	ENSMUSG00000035248.10	novel	4186	19	NA	NA	-5519	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_15	32.1244801082013	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59950463	59919693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59948909
ES.9397.45	chr13	-	8635	24	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	618	-1	intron_retention	FALSE	canonical	3	83	junction_3	13.2926916827975	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTTATCCACATTAT	NA	False	NA	-9	True	AATAAA	-16	NA	59969784	59919694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59933627_59933708_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373
ES.9397.46	chr13	-	4376	21	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	29.1065284773021	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTTATCCACATTAT	NA	False	NA	-9	True	AATAAA	-16	NA	59970916	59919694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59970789
ES.9397.47	chr13	-	4265	25	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	36.110074771454	232	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTTATCCACATTAT	NA	False	NA	-9	True	AATAAA	-16	NA	59970947	59919694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944703_59948403_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.48	chr13	-	5473	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.6956334752447	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTTTATCCACATTAT	NA	False	NA	-9	True	AATAAA	-16	NA	59970930	59919694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948537_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.5	chr13	-	173	1	Intergenic	novelGene_7678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59899946	59899773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59899800_59899900
ES.9397.51	chr13	-	5951	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.582069008129	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTAATTTTATCCACATT	NA	False	NA	-11	True	AATAAA	-14	NA	59970917	59919696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.52	chr13	-	5326	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	165	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTTACTTTTTATGA	NA	False	NA	NA	False	AATAAA	-2	NA	59970928	59919925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
ES.9397.53	chr13	-	5338	29	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	6	159	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	38.2965070075535	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTGCTTTTTACTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	59970922	59919931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59926565_59926630_59926950_59927016_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.54	chr13	-	5224	27	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	1	156	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	26.9885193649965	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAAAAGTGCTTTTTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	59970927	59919934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.55	chr13	-	5619	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	12	127	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAATTAAAGGA	NA	False	NA	NA	False	CATAAA	-41	NA	59970916	59919963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.56	chr13	-	5249	28	FSM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	31	589	-2	127	multi-exon	FALSE	canonical	3	16	junction_2	33.5472559435836	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAATTAAAGGA	NA	False	NA	NA	False	CATAAA	-41	NA	59970930	59919963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.57	chr13	-	4768	26	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	465	96	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	27.4201677602454	231	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATGACTACAGCGTC	NA	False	NA	NA	False	AATAGA	-33	NA	59969937	59920351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963532_59964084_59964202_59964471_59964654_59969373
ES.9397.58	chr13	-	4730	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	5	36	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGAGATTTGAAGATT	NA	False	NA	NA	False	AATATA	-19	NA	59970923	59920411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.59	chr13	-	6776	26	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	10	-7519	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	21.7915947098876	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	59970918	59927966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.60	chr13	-	2283	2	Fusion	ENSMUSG00000114835.2_ENSMUSG00000035248.10	novel	2452	2	NA	NA	-1399	893	multi-exon	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59930791	59927982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_59929360_59929885
ES.9397.61	chr13	-	5426	26	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	16	-8428	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	27.4821833193798	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTCAACTTCTAAGACT	NA	False	NA	NA	False	ATTAAA	-19	NA	59970912	59928875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.62	chr13	-	5213	26	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	1	-8656	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	27.4821833193798	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGCCTTTAAGTT	NA	False	NA	NA	False	AATAGA	-13	NA	59970927	59929103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969938_59970894
ES.9397.63	chr13	-	5520	25	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	14	-11192	combination_of_known_junctions	FALSE	canonical	3	36	junction_24	22.2247047224479	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGGTGCACATGCTGC	NA	False	NA	NA	False	AATAAA	-15	NA	59970914	59931639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
ES.9397.64	chr13	-	5090	25	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	27	12267	-6	-11194	5prime_fragment	FALSE	canonical	3	25	junction_24	23.9234528699814	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGGGTGCACATGCT	NA	False	NA	NA	False	AATAAA	-13	NA	59970934	59931641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.65	chr13	-	2692	9	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-3	-6811	intron_retention	FALSE	canonical	3	25	junction_8	34.3110769285955	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCTAAGCAGGTACTTC	NA	False	NA	NA	False	NA	NA	NA	59970931	59954960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964654_59969373_59969925_59970894
ES.9397.66	chr13	-	3262	9	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-3	-6845	intron_retention	FALSE	canonical	3	25	junction_8	34.3110769285955	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59970931	59954994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59955980_59957191_59957319_59958384_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ES.9397.67	chr13	-	3462	2	NNC	ENSMUSG00000035248.10	novel	2499	2	NA	NA	12	981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTTTTGTTTTTCTTTTT	NA	False	NA	3	True	ATTAAA	-25	NA	59970916	59966945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970446
ES.9397.68	chr13	-	3124	2	NNC	ENSMUSG00000035248.10	novel	619	2	NA	NA	6	980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	2	True	ATTAAA	-24	NA	59970922	59966946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970789
ES.9397.69	chr13	-	3451	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	28	-980	9	980	multi-exon	FALSE	canonical	3	36	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	2	True	ATTAAA	-24	NA	59970919	59966946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59969925_59970446
ES.9397.7	chr13	-	6153	3	ISM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	2612	5	2279	0	3prime_fragment	FALSE	canonical	3	419	junction_1	1	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGGTTCCTTTTCTT	NA	False	NA	-2	True	ATTAAA	-18	NA	59915012	59903227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59904818_59906703_59906810_59910555
ES.9397.70	chr13	-	3117	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225179.2	619	2	0	-2498	0	980	multi-exon	FALSE	canonical	3	43	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	2	True	ATTAAA	-24	NA	59970928	59966946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59969925_59970789
ES.9397.71	chr13	-	3033	2	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	12	47572	-2	980	5prime_fragment	FALSE	canonical	3	25	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTTTTGTTTTTCTTTT	NA	False	NA	2	True	ATTAAA	-24	NA	59970949	59966946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_59969925_59970894
ES.9397.72	chr13	-	3984	1	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	-6	976	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGACGGTTTTGTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	59970934	59966950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_59967000_59970900
ES.9397.73	chr13	-	2459	2	NNC	ENSMUSG00000035248.10	novel	2499	2	NA	NA	14	-20	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAATTAAGATATG	NA	False	NA	NA	False	NA	NA	NA	59970914	59967946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970446
ES.9397.74	chr13	-	1694	2	NNC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	2	-382	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCTTTGAGCTCGGCA	NA	False	NA	NA	False	NA	NA	NA	59970959	59968308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970894
ES.9397.75	chr13	-	2058	2	NNC	ENSMUSG00000035248.10	novel	2499	2	NA	NA	16	-419	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	59970912	59968345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970446
ES.9397.76	chr13	-	2045	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	35	419	16	-419	multi-exon	FALSE	canonical	3	36	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAATAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	59970912	59968345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_59969925_59970446
ES.9397.77	chr13	-	1906	2	NNC	ENSMUSG00000035248.10	novel	2499	2	NA	NA	-6	-593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCATGAAAACTGTTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	59970934	59968519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59969938_59970446
ES.9397.8	chr13	-	7279	18	Fusion	ENSMUSG00000044792.8_ENSMUSG00000035248.10	novel	4186	19	NA	NA	-3261	-1	intron_retention	FALSE	canonical	3	83	junction_7	117.448744618479	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTAGTGGTTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	59948205	59903228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454
ES.9397.9	chr13	-	1923	4	NNC	ENSMUSG00000044792.8	novel	1942	4	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	197.99158231265	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTAGTGGTTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	59917599	59903228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_59904818_59906703_59906810_59910555_59910622_59917437
ES.9398.1	chr13	+	316	2	Intergenic	novelGene_7679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGATGTGTGAATTTATG	NA	False	NA	NA	False	NA	NA	NA	59977082	59978505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59977216_59978322
ES.9398.2	chr13	+	3077	2	NNC	ENSMUSG00000114354.2	novel	727	3	NA	NA	6028	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTATGGCTTTGTCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	59977107	59981050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_59977216_59978081
ES.9398.3	chr13	+	2417	1	Intergenic	novelGene_7680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	59977107	59979524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_59977100_59979500
ES.9399.1	chr13	-	2341	1	Intergenic	novelGene_7681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60001582	59999241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_59999200_60001600
ES.94.1	chr1	-	5757	1	Antisense	novelGene_ENSMUSG00000048960.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAAAGCCTTTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	11177030	11171273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_11171300_11177000
ES.940.1	chr1	+	171	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGTGTGAGAAA	NA	False	NA	NA	False	NA	NA	NA	87171332	87171503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87171300_87171500
ES.9400.1	chr13	-	548	2	Intergenic	novelGene_7682	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTCACTAAAAACAGAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	60019372	60015646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_60016090_60019267
ES.9401.1	chr13	+	183	1	Intergenic	novelGene_7683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAAGTTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	60191756	60191939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_60191800_60191900
ES.9402.1	chr13	-	3156	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	-195	0	-195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGTGCAGTTGCTTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	60325374	60322218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_60322200_60325400
ES.9402.2	chr13	-	3019	2	Genic_Genomic	ENSMUSG00000052957.9	novel	2961	1	NA	NA	-151	-1	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGGTGCAGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-32	NA	60325330	60322219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_60324693_60324784
ES.9402.3	chr13	-	2269	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	2	690	2	-690	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACCATGGTGTTGAACAA	NA	False	NA	NA	False	AAGAAA	-5	NA	60325177	60322908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_60322900_60325200
ES.9403.1	chr13	+	5831	26	NNC	ENSMUSG00000021559.15	novel	580	8	NA	NA	-161	17	intron_retention	TRUE	canonical	0	0	junction_1	13.7360256260681	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAAGTTGTACTCTTT	9660	False	NA	NA	False	AATAAA	-38	NA	60749599	60911022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749687_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.10	chr13	+	5880	26	NNC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	0	-5	intron_retention	FALSE	canonical	0	0	junction_7	13.6256229215401	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9821	False	NA	NA	False	AATAAA	-16	NA	60749760	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867429_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.11	chr13	+	5301	26	NIC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	15.0622176322081	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9822	False	NA	NA	False	AATAAA	-15	NA	60749761	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
ES.9403.12	chr13	+	6052	27	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	-3	-6	intron_retention	FALSE	canonical	0	0	junction_3	16.9295442187798	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9828	False	NA	NA	False	AATAAA	-15	NA	60749767	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60859419_60859594_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.13	chr13	+	2300	9	ISM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-1	41438	-1	-414	5prime_fragment	FALSE	canonical	3	43	junction_3	7.43303437365925	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9830	False	NA	NA	False	NA	NA	NA	60749769	60869177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924
ES.9403.14	chr13	+	5997	27	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_20	16.7653929976862	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9833	False	NA	NA	False	AATAAA	-16	NA	60749772	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60894484_60894608_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.15	chr13	+	5862	25	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	2	-5	intron_retention	FALSE	non_canonical	0	0	junction_6	17.3657049477795	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9833	False	NA	NA	False	AATAAA	-16	NA	60749772	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866183_60867423_60867577_60867927_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.16	chr13	+	5651	25	NIC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	3	-5	intron_retention	FALSE	canonical	0	0	junction_2	13.7951279644502	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9834	False	NA	NA	False	AATAAA	-16	NA	60749773	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_60749925_60750238_60750411_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.18	chr13	+	6503	23	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	9	-1352	intron_retention	FALSE	canonical	0	0	junction_21	17.9738676237301	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTCTGGTGTTCCCTC	9840	False	NA	NA	False	AATAAA	-13	NA	60749779	60907329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60906593_60906746_60906880
ES.9403.19	chr13	+	4837	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	10	-552	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.6108192258953	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAATAAGGAAAGAAA	9841	False	NA	NA	False	NA	NA	NA	60749780	60910063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844175_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.2	chr13	+	5974	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-96	-387	-86	-3	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTAGTCCTTGATT	9735	False	NA	NA	False	AATAAA	-18	NA	60749674	60911002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.20	chr13	+	6101	24	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	14	-6	intron_retention	FALSE	canonical	0	0	junction_2	14.1667092923485	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9845	False	NA	NA	False	AATAAA	-15	NA	60749784	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750407_60844044_60844267_60864491_60864631_60865827_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.22	chr13	+	6316	25	NIC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	21	-6	intron_retention	FALSE	canonical	3	16	junction_24	11.4187954219738	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9852	False	NA	NA	False	AATAAA	-15	NA	60749791	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
ES.9403.23	chr13	+	5755	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	21	-5	intron_retention	FALSE	canonical	0	0	junction_3	13.6108192258953	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9852	False	NA	NA	False	AATAAA	-16	NA	60749791	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844175_60864499_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.24	chr13	+	5485	28	NNC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	28	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	17.8153153082848	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9859	False	NA	NA	False	AATAAA	-16	NA	60749798	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60894484_60894615_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
ES.9403.25	chr13	+	3212	2	Intergenic	novelGene_7684	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCTACAGTTAGTTG	3634	False	NA	NA	False	AATAAA	-17	NA	60755454	60760065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_60757128_60758526
ES.9403.26	chr13	+	2443	1	FSM	ENSMUSG00000114501.2	ENSMUST00000225376.2	6429	1	973	3013	973	-3013	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCACATACTTAGCAATG	9186	False	NA	NA	False	NA	NA	NA	60771753	60774196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_60771800_60774200
ES.9403.27	chr13	+	726	1	FSM	ENSMUSG00000114277.2	ENSMUST00000225897.2	220	1	136	-642	136	642	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAAAAGGTAGATAGT	NA	False	NA	NA	False	NA	NA	NA	60789739	60790465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_60789700_60790500
ES.9403.28	chr13	+	1471	1	Intergenic	novelGene_7687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60793110	60794581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_60793100_60794600
ES.9403.3	chr13	+	5457	27	FSM	ENSMUSG00000021559.15	ENSMUST00000226059.2	5009	27	-64	-384	-64	-5	multi-exon	FALSE	canonical	3	16	junction_26	11.2282004438423	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTGTCTAGTCCTTGA	9757	False	NA	NA	False	AATAAA	-16	NA	60749696	60911000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
ES.9403.4	chr13	+	3815	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	-29	-1349	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_25	13.3719706849813	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGTGTTCCCTCTTT	9792	False	NA	NA	False	AATAAA	-16	NA	60749731	60907332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60906880
ES.9403.5	chr13	+	4973	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	-34	552	-24	-552	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAATAAGGAAAGAAA	9797	False	NA	NA	False	NA	NA	NA	60749736	60910063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.6	chr13	+	5781	26	NNC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	-22	-6	intron_retention	FALSE	non_canonical	0	0	junction_1	17.2165501770825	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9799	False	NA	NA	False	AATAAA	-15	NA	60749738	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750360_60750407_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.7	chr13	+	5988	25	NIC	ENSMUSG00000021559.15	novel	5491	26	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	41	junction_18	8.46889734394167	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTAGTCCTTGATTTG	9809	False	NA	NA	False	AATAAA	-20	NA	60749748	60911004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ES.9403.8	chr13	+	5231	27	NNC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	13.5179586883742	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9809	False	NA	NA	False	AATAAA	-15	NA	60749748	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909505_60910170
ES.9403.9	chr13	+	5413	27	NIC	ENSMUSG00000021559.15	novel	5009	27	NA	NA	0	-6	combination_of_known_junctions	FALSE	canonical	2	5	junction_26	12.7669135988396	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTCTAGTCCTTG	9821	False	NA	NA	False	AATAAA	-15	NA	60749760	60910999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909699_60910170
ES.9404.1	chr13	-	2451	1	Intergenic	novelGene_7685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60758729	60756278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_60756300_60758700
ES.9405.1	chr13	-	1119	1	Intergenic	novelGene_7686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	60762744	60761625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_60761600_60762700
ES.9406.1	chr13	-	1636	8	NNC	ENSMUSG00000050345.10	novel	1432	8	NA	NA	7963	-9	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	2.96922995583236	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATAGTAGGACTTCT	1598	False	NA	NA	False	AATAAA	-11	NA	61004326	60990434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61003959
ES.9406.2	chr13	-	2319	8	NNC	ENSMUSG00000050345.10	novel	1432	8	NA	NA	7965	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.70328039909021	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAGATAGTAGGACTT	1600	False	NA	NA	False	AATAAA	-9	NA	61004324	60990436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61003272
ES.9407.1	chr13	+	4645	5	Intergenic	novelGene_7688	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGTTCCTCTGTA	NA	False	NA	NA	False	AATGAA	-17	NA	61892319	61900943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61892451_61892536_61892871_61892954_61893373_61893456_61895258_61898982
ES.9407.10	chr13	+	2403	5	Intergenic	novelGene_7695	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	67.9613860953409	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCATGGCCTTGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	61919460	61935650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61919514_61924014_61924309_61928416_61928544_61928736_61928798_61933782
ES.9407.100	chr13	+	3152	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	3	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	127.079699401596	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	62277749	62321726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62278045_62278154_62317255_62317383_62317567_62317629_62318963
ES.9407.101	chr13	+	2624	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	3	2781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	113.706859951368	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTTCGTTTAATTTTA	NA	False	NA	13	True	AATAAA	-14	NA	62277749	62324014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963_62319222_62321929
ES.9407.102	chr13	+	3162	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	3	493	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	125.996775752398	556	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	62277749	62321726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62289865_62289984_62317255_62317383_62317567_62317629_62318963
ES.9407.103	chr13	+	3269	6	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	3	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	121.66741552281	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62277749	62321749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62279329_62279371_62289822_62289984_62317255_62317383_62317567_62317629_62318963
ES.9407.104	chr13	+	4836	7	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	6	2777	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	115.794957671836	581	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCAATTTCGTTTAAT	NA	False	NA	9	True	AATAAA	-10	NA	62277752	62324010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62289865_62289984_62317255_62317383_62317567_62317629_62318963_62321980_62322536_62323626_62323675
ES.9407.105	chr13	+	6984	6	NIC	ENSMUSG00000074867.5	novel	1560	5	NA	NA	6	5334	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	19.2561678430575	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTGTTGATTATTTAT	NA	False	NA	5	True	ATTAAA	-22	NA	62277752	62389292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_62277843_62351245_62351373_62351567_62351629_62381070_62381198_62381382_62381444_62382774
ES.9407.106	chr13	+	3538	5	NNC	ENSMUSG00000074867.5	novel	1379	3	NA	NA	127	519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.079699401596	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277873	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62278154_62315229_62315511_62317255_62317383_62317567_62317629_62318963
ES.9407.107	chr13	+	3760	1	FSM	ENSMUSG00000119163.1	ENSMUST00000083063.4	133	1	-3594	-33	-3594	33	mono-exon	FALSE	NA	NA	NA	NA	NA	482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAGGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62281149	62284909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62281100_62284900
ES.9407.108	chr13	+	194	1	Intergenic	novelGene_7706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	477	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGACATTCAGG	NA	False	NA	NA	False	NA	NA	NA	62282374	62282568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62282400_62282600
ES.9407.109	chr13	+	6537	2	Intergenic	novelGene_7707	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCGGGCTTGGTGGTGCGC	NA	False	NA	NA	False	NA	NA	NA	62292171	62304381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62294640_62300312
ES.9407.11	chr13	+	4035	5	Intergenic	novelGene_7696	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	70.7583917284727	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	61924190	61941316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61924309_61928416_61928544_61928736_61928798_61933782_61935004_61938808
ES.9407.110	chr13	+	4354	4	NNC	ENSMUSG00000074867.5	novel	1379	3	NA	NA	32204	519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.90766547201	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62309950	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62310631_62316558_62317383_62317567_62317629_62318963
ES.9407.111	chr13	+	3876	2	NIC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	38793	517	intron_retention	FALSE	canonical	3	135	junction_1	0	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62316539	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_62317629_62318963
ES.9407.112	chr13	+	4282	3	ISM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	39394	-1692	39377	1692	3prime_fragment	FALSE	canonical	3	135	junction_2	87.5	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATTGGCTAATATCTAT	NA	False	NA	NA	False	NA	NA	NA	62317123	62322925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_62317383_62317567_62317629_62318963
ES.9407.113	chr13	+	3105	4	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	41684	2784	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGTTTAATTTTATTT	NA	False	NA	16	True	AATAAA	-17	NA	62319430	62324017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62319512_62320351_62320940_62321023_62321979_62322536
ES.9407.114	chr13	+	3685	4	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	41777	2784	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGTTTAATTTTATTT	NA	False	NA	16	True	AATAAA	-17	NA	62319523	62324017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62320001_62320168_62320940_62321023_62321980_62322536
ES.9407.115	chr13	+	177	1	Intergenic	novelGene_7708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62338209	62338386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62338200_62338400
ES.9407.116	chr13	+	210	1	Intergenic	novelGene_7709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAGGTGAAAACACT	NA	False	NA	NA	False	TTTAAA	-15	NA	62361628	62361838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62361600_62361800
ES.9407.117	chr13	+	6594	5	NNC	ENSMUSG00000074867.5	novel	449	4	NA	NA	-62	5331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.9032558571174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTCTGTTGATTATT	NA	False	NA	2	True	ATTAAA	-19	NA	62367307	62389289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774_62387056_62387308
ES.9407.118	chr13	+	3312	5	NNC	ENSMUSG00000074867.5	novel	449	4	NA	NA	-39	5331	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9032558571174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTCTGTTGATTATT	NA	False	NA	2	True	ATTAAA	-19	NA	62367330	62389289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774_62385621_62389132
ES.9407.119	chr13	+	2594	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-37	-2108	-37	1103	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAGCTAATATCTATC	NA	False	NA	NA	False	NA	NA	NA	62367332	62385061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.12	chr13	+	3122	4	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113626.2_ENSMUSG00000074867.5	novel	419	3	NA	NA	2	517	multi-exon	FALSE	canonical	3	6	junction_1	57.412735714493	1211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	61952072	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_61952220_62254561_62254689_62317567_62317629_62318963
ES.9407.120	chr13	+	4133	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-36	-3648	-36	2643	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGATGTTTATTATGT	NA	False	NA	NA	False	ATTAAA	-26	NA	62367333	62386601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.121	chr13	+	6824	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-36	-6339	-36	5334	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTGTTGATTATTTAT	NA	False	NA	5	True	ATTAAA	-22	NA	62367333	62389292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.122	chr13	+	4924	5	NNC	ENSMUSG00000074867.5	novel	449	4	NA	NA	-15	7045	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.9032558571174	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTGTTTTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	62367354	62391003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774_62385542_62389131
ES.9407.123	chr13	+	3195	5	NNC	ENSMUSG00000074867.5	novel	449	4	NA	NA	-13	5331	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.9032558571174	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTCTGTTGATTATT	NA	False	NA	2	True	ATTAAA	-19	NA	62367356	62389289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774_62385537_62389139
ES.9407.124	chr13	+	1954	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-13	-1492	-13	487	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTATGTGTGGACCA	NA	False	NA	NA	False	NA	NA	NA	62367356	62384445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.125	chr13	+	1495	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-13	-1033	-13	28	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGATTGTGAGCAAATT	NA	False	NA	NA	False	NA	NA	NA	62367356	62383986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.126	chr13	+	4612	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	-10	-4153	-10	3148	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCCTGCCTTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	62367359	62387106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ES.9407.127	chr13	+	2005	4	NNC	ENSMUSG00000074867.5	novel	355	4	NA	NA	5457	489	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1993265821489	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTATGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62372826	62384447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62372971_62381070_62381198_62381382_62381444_62382774
ES.9407.128	chr13	+	3958	6	NNC	ENSMUSG00000074867.5	novel	355	4	NA	NA	5457	63039	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.2905981806689	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATTAACTTGAATG	NA	False	NA	NA	False	NA	NA	NA	62372826	62446997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62372971_62381070_62381198_62381382_62381444_62382774_62385621_62389132_62389734_62446818
ES.9407.129	chr13	+	3208	5	NNC	ENSMUSG00000074867.5	novel	355	4	NA	NA	5505	5330	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	13.6747943311773	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTTCTGTTGATTAT	NA	False	NA	1	True	ATTAAA	-18	NA	62372874	62389288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62372971_62381070_62381198_62381382_62381444_62382774_62385542_62389131
ES.9407.13	chr13	+	2541	6	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113626.2	novel	419	3	NA	NA	29	1355	multi-exon	FALSE	canonical	0	0	junction_3	232.721808174481	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	61952108	62261216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_61952220_62194994_62195122_62195306_62195368_62254561_62254689_62254881_62254943_62259162
ES.9407.130	chr13	+	5070	1	Intergenic	novelGene_7710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATGGTTTCCGGGGTTC	NA	False	NA	NA	False	AATAAA	-18	NA	62403220	62408290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62403200_62408300
ES.9407.131	chr13	+	3352	5	NNC	ENSMUSG00000113081.2	novel	1044	3	NA	NA	-8155	2005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	210.37644830161	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATGATGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	62403224	62425072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62403345_62417054_62417157_62420579_62420707_62420906_62420968_62422130
ES.9407.132	chr13	+	2689	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	3	-2240	3	274	multi-exon	FALSE	canonical	3	513	junction_2	20.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGATGGCCCGTTGT	NA	False	NA	10	True	AATAAA	-12	NA	62411382	62423341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62411510_62420579_62420707_62420906
ES.9407.133	chr13	+	441	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	14	-3	14	3	multi-exon	FALSE	canonical	3	513	junction_2	20.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAGGTATCTGAATTT	NA	False	NA	16	True	NA	NA	NA	62411393	62421104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62411510_62420579_62420707_62420906
ES.9407.134	chr13	+	3250	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	14	2009	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGATGATTTCTTTTTGA	NA	False	NA	NA	False	AATAAA	-19	NA	62411393	62425076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
ES.9407.135	chr13	+	3232	5	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	15	40558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	265.90129747709	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAAAATGTATGTATGGA	NA	False	NA	NA	False	NA	NA	NA	62411394	62463625	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62458804_62461161_62463052
ES.9407.136	chr13	+	1512	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	20	277	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGATGGCCCGTTGTTTA	NA	False	NA	13	True	AATAAA	-15	NA	62411399	62423344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
ES.9407.137	chr13	+	892	1	NIC	ENSMUSG00000113081.2	novel	452	3	NA	NA	21	-8809	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62411400	62412292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_62411400_62412300
ES.9407.138	chr13	+	2692	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	36	1473	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATAAACTGCTATCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	62411415	62424540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
ES.9407.139	chr13	+	2615	5	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	50	2005	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	240.048953340772	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATGATGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	62411429	62425072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130_62423681_62424275
ES.9407.14	chr13	+	655	3	NNC	ENSMUSG00000113626.2	novel	353	2	NA	NA	47	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAAGCCTGAGTAATAC	NA	False	NA	NA	False	NA	NA	NA	61952126	61974340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_61952356_61963139_61963348_61974122
ES.9407.140	chr13	+	5419	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	53	5388	intron_retention	FALSE	non_canonical	0	0	junction_3	252.05070036712	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGCCTCTCTTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	62411432	62428455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62411510_62420579_62420707_62420906_62423553_62425886
ES.9407.141	chr13	+	4376	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	53	-3977	53	2011	multi-exon	FALSE	canonical	3	513	junction_2	20.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGATTTCTTTTTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	62411432	62425078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62411510_62420579_62420707_62420906
ES.9407.142	chr13	+	5166	1	Genic_Genomic	ENSMUSG00000113081.2	novel	NA	NA	NA	NA	-2395	278	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGGCCCGTTGTTTAT	NA	False	NA	14	True	AATAAA	-16	NA	62418179	62423345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_62418200_62423300
ES.9407.143	chr13	+	9408	1	Intergenic	novelGene_7712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTGTGCACTTATGG	NA	False	NA	NA	False	NA	NA	NA	62427297	62436705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62427300_62436700
ES.9407.144	chr13	+	3294	1	Intergenic	novelGene_7713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAGTCTATCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	62428619	62431913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62428600_62431900
ES.9407.145	chr13	+	2005	1	Intergenic	novelGene_7714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62446144	62448149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62446100_62448100
ES.9407.15	chr13	+	418	2	NNC	ENSMUSG00000113626.2	novel	353	2	NA	NA	50	-12	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATAAAAAAGATCCT	NA	False	NA	NA	False	NA	NA	NA	61952129	61974314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_61952356_61974122
ES.9407.16	chr13	+	1224	2	Intergenic	novelGene_7697	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	639	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCCCACAAAAAACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	62108251	62263567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62108266_62262357
ES.9407.17	chr13	+	170	1	Intergenic	novelGene_7698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAACAACAGCAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	62124051	62124221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62124100_62124200
ES.9407.18	chr13	+	9249	7	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113504.2	novel	478	4	NA	NA	-118731	514	multi-exon	FALSE	non_canonical	0	0	junction_4	239.840687864998	647	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTCATGGCTGTAA	1136	False	NA	NA	False	NA	NA	NA	62126830	62274334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162_62259858_62260206_62260735_62266579_62268352_62268407
ES.9407.19	chr13	+	1309	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118729	285	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	1138	False	NA	3	True	NA	NA	NA	62126832	62260146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ES.9407.2	chr13	+	2635	4	Genic_Genomic	ENSMUSG00000113836.2_ENSMUSG00000113626.2	novel	2707	4	NA	NA	-59622	691	multi-exon	TRUE	non_canonical	0	0	junction_1	0	657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATAAGCTTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	61892448	62199491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_61892535_61892954_61893130_62009165_62009210_62197161
ES.9407.20	chr13	+	3208	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118720	2193	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTCTATATTATTT	1147	False	NA	NA	False	AATATA	-14	NA	62126841	62262054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ES.9407.21	chr13	+	2581	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118720	1566	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGTGTTGTTGTAGAG	1147	False	NA	NA	False	AGTAAA	-16	NA	62126841	62261427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ES.9407.22	chr13	+	1479	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118717	286	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	233.757709320285	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCTTGGTAATGGT	1150	False	NA	4	True	NA	NA	NA	62126844	62260147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62258981
ES.9407.23	chr13	+	1986	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118717	974	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	214.715832878921	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCATATTTGTGTGTT	1150	False	NA	NA	False	ATTAAA	-41	NA	62126844	62260835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162
ES.9407.24	chr13	+	5518	3	NNC	ENSMUSG00000113566.2	novel	820	2	NA	NA	-118717	286	intron_retention	FALSE	canonical	3	69	junction_1	239	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCTTGGTAATGGT	1150	False	NA	4	True	NA	NA	NA	62126844	62260147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881
ES.9407.25	chr13	+	8996	7	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113504.2	novel	478	4	NA	NA	-118710	286	multi-exon	FALSE	non_canonical	0	0	junction_4	239.840687864998	647	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTGTTCATCTTTATA	1157	False	NA	NA	False	AGTAAA	-19	NA	62126851	62274106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62126970_62254561_62254689_62254881_62254943_62259162_62259858_62260206_62260735_62266579_62268348_62268407
ES.9407.26	chr13	+	3112	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118702	2191	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_3	226.041785714254	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGTGTCTATATTAT	1165	False	NA	NA	False	AATATA	-12	NA	62126859	62262052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62254561_62254689_62254881_62254943_62259238
ES.9407.27	chr13	+	9272	7	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113504.2	novel	478	4	NA	NA	-118701	380	multi-exon	TRUE	non_canonical	0	0	junction_4	197.720973428044	647	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGGTTACATGAAGTG	1166	False	NA	NA	False	AATAAA	-38	NA	62126860	62274200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62126970_62254561_62254689_62254881_62254943_62258981_62259858_62260206_62260735_62266579_62268371_62268420
ES.9407.28	chr13	+	3475	5	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-118696	2190	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	245.50089103708	638	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGTGTGTCTATATTA	1171	False	NA	NA	False	AATATA	-11	NA	62126865	62262051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62126970_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ES.9407.29	chr13	+	2818	2	Genic_Genomic	ENSMUSG00000113504.2	novel	278	1	NA	NA	-121083	520	multi-exon	TRUE	canonical	0	0	junction_1	0	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGGCTGTAATTCAAT	NA	False	NA	NA	False	NA	NA	NA	62152459	62274340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_62152645_62271707
ES.9407.3	chr13	+	2301	1	Intergenic	novelGene_7690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGCTGTAGATTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	61896825	61899126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61896800_61899100
ES.9407.30	chr13	+	1803	2	Genic_Genomic	ENSMUSG00000113504.2	novel	278	1	NA	NA	-120201	383	multi-exon	TRUE	non_canonical	0	0	junction_1	0	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTTACATGAAGTGGTG	NA	False	NA	NA	False	AATAAA	-41	NA	62153341	62274203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_62153452_62272510
ES.9407.31	chr13	+	3997	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	23	-1313	23	1313	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTAATATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62163441	62200113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ES.9407.32	chr13	+	3304	3	FSM	ENSMUSG00000113836.2	ENSMUST00000223499.2	687	3	-342	-2275	37	695	multi-exon	FALSE	canonical	3	21	junction_2	28	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGCTTGTGTGTGGACC	NA	False	NA	NA	False	NA	NA	NA	62163455	62199495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62196729
ES.9407.33	chr13	+	5024	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	49	-2366	49	2366	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTTTAATTTTATTTATGG	NA	False	NA	NA	False	AATAAA	-21	NA	62163467	62201166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ES.9407.34	chr13	+	3104	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	298	-695	-81	695	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGCTTGTGTGTGGACC	NA	False	NA	NA	False	NA	NA	NA	62163716	62199495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ES.9407.35	chr13	+	3653	3	FSM	ENSMUSG00000113836.2	ENSMUST00000223499.2	687	3	-73	-2893	-73	1313	multi-exon	FALSE	canonical	3	21	junction_2	28	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTAATATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62163724	62200113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62196729
ES.9407.36	chr13	+	4700	3	FSM	ENSMUSG00000113836.2	ENSMUST00000223499.2	687	3	-71	-3942	-71	2362	multi-exon	FALSE	canonical	3	21	junction_2	28	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGTTTAATTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	62163726	62201162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62196729
ES.9407.37	chr13	+	4924	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-58	2361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	141.039887974998	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTCGTTTAATTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	62163739	62201161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62174064_62174242_62194994_62195122_62195306_62195368_62196729
ES.9407.38	chr13	+	2603	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	329	-225	-50	225	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTACGAAGGAATT	NA	False	NA	NA	False	NA	NA	NA	62163747	62199025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ES.9407.39	chr13	+	4895	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-49	2360	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.473936607748	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTCGTTTAATTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	62163748	62201160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62174067_62174226_62194994_62195122_62195306_62195368_62196729
ES.9407.4	chr13	+	5871	5	Intergenic	novelGene_7691	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	61.6862018607079	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	61919354	61935101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61919514_61928416_61928544_61928736_61931193_61931241_61932101_61932831
ES.9407.40	chr13	+	3218	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-49	695	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	135.210946302435	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGCTTGTGTGTGGACC	NA	False	NA	NA	False	NA	NA	NA	62163748	62199495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62174079_62174226_62194994_62195122_62195306_62195368_62196729
ES.9407.41	chr13	+	4815	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-32	2364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	141.748677242506	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTTAATTTTATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	62163765	62201164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62167138_62167230_62194994_62195122_62195306_62195368_62196729
ES.9407.42	chr13	+	3826	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-31	1309	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	135.473936607748	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATATTGGCTAATATCTA	NA	False	NA	NA	False	NA	NA	NA	62163766	62200109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62174067_62174226_62194994_62195122_62195306_62195368_62196729
ES.9407.43	chr13	+	4758	5	NNC	ENSMUSG00000113836.2	novel	2707	4	NA	NA	-25	2364	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	137.698946982176	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTTAATTTTATTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	62163772	62201164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62163867_62165339_62165381_62194994_62195122_62195306_62195368_62196729
ES.9407.44	chr13	+	3048	4	Fusion	ENSMUSG00000113836.2_ENSMUSG00000074867.5	novel	2707	4	NA	NA	-2	519	multi-exon	FALSE	canonical	0	0	junction_1	126.90766547201	1088	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62163795	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62163867_62317255_62317383_62317567_62317629_62318963
ES.9407.45	chr13	+	5687	5	NNC	ENSMUSG00000074867.5	novel	1379	3	NA	NA	-84731	519	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	127.297633520816	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62192968	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62193052_62314170_62314842_62315299_62317383_62317567_62317629_62318963
ES.9407.46	chr13	+	3250	6	Fusion	ENSMUSG00000113836.2_ENSMUSG00000074867.5	novel	2707	4	NA	NA	1314	2784	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCGTTTAATTTTATTT	NA	False	NA	16	True	AATAAA	-17	NA	62197975	62324017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62198079_62198582_62198631_62319520_62319771_62320526_62320940_62321023_62321979_62322536
ES.9407.47	chr13	+	205	1	Intergenic	novelGene_7699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTAAAAGAAAAGAGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	62213149	62213354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62213100_62213400
ES.9407.48	chr13	+	1023	2	Antisense	novelGene_ENSMUSG00000114036.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACGGTTTCCCTGTCGTT	NA	False	NA	NA	False	NA	NA	NA	62225386	62227085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62225979_62226654
ES.9407.49	chr13	+	6054	2	Antisense	novelGene_ENSMUSG00000114036.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62225826	62243423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62229887_62241429
ES.9407.5	chr13	+	1291	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-326167	285	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	221.287645887027	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	61919394	62260146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_61919514_62254561_62254689_62254881_62254943_62259162
ES.9407.50	chr13	+	2641	2	Antisense	novelGene_ENSMUSG00000114036.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62229239	62243423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62229889_62241431
ES.9407.51	chr13	+	199	1	Intergenic	novelGene_7700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTTGTGCATAAATAAG	NA	False	NA	NA	False	NA	NA	NA	62242743	62242942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62242700_62242900
ES.9407.53	chr13	+	3176	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-2263	-5	2193	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTCTATATTATTT	NA	False	NA	NA	False	AATATA	-14	NA	62245556	62262054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.54	chr13	+	1268	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-355	-5	285	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	62245556	62260146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.55	chr13	+	2338	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-1425	-5	1355	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	62245556	62261216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.56	chr13	+	2242	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-5	965	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	404	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTTGGGTGCATAT	NA	False	NA	NA	False	ATTAAA	-32	NA	62245556	62260826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ES.9407.57	chr13	+	1513	6	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-5	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	209.719431622346	393	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTGTATATCCTTGGA	NA	False	NA	3	True	NA	NA	NA	62245556	62259860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62250218_62250513_62252725_62252782_62254561_62254689_62254881_62254943_62258981
ES.9407.58	chr13	+	2907	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-5	3704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	243.795451602819	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCCCACAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	62245556	62263565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62254561_62254689_62254881_62254943_62260942
ES.9407.59	chr13	+	1949	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-27	-1036	-5	966	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTTGGGTGCATATT	NA	False	NA	NA	False	ATTAAA	-33	NA	62245556	62260827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.6	chr13	+	2794	4	Intergenic	novelGene_7692	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	77.5686076250495	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGCCTTGAAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	61919417	61935652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61920154_61928416_61928544_61928736_61928798_61933782
ES.9407.60	chr13	+	3466	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-3	2191	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	405	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGTGTCTATATTAT	NA	False	NA	NA	False	AATATA	-12	NA	62245558	62262052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ES.9407.61	chr13	+	1560	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-2	286	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	230.419590095981	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCCTTGGTAATGGT	NA	False	NA	4	True	NA	NA	NA	62245559	62260147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162
ES.9407.62	chr13	+	3733	7	Fusion	ENSMUSG00000113566.2_ENSMUSG00000074867.5	novel	478	4	NA	NA	-2	516	multi-exon	FALSE	non_canonical	0	0	junction_4	224.532848376357	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62245559	62321749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238_62259715_62317255_62317383_62317567_62317631_62318963
ES.9407.63	chr13	+	3031	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	-1	-2552	-1	2128	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATATAATGTAGAAT	NA	False	NA	NA	False	AATAAA	-25	NA	62245560	62261989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
ES.9407.64	chr13	+	9365	8	Fusion	ENSMUSG00000113566.2_ENSMUSG00000113504.2	novel	886	4	NA	NA	-1	383	multi-exon	FALSE	non_canonical	0	0	junction_5	226.555394856921	414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTTACATGAAGTGGTG	NA	False	NA	NA	False	AATAAA	-41	NA	62245560	62274203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_62245653_62250218_62250513_62254561_62254689_62254881_62254943_62259162_62259858_62260206_62260735_62266579_62268352_62268407
ES.9407.65	chr13	+	4050	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-22	-3142	0	3072	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTTTTAAATG	NA	False	NA	NA	False	ACTAAA	-11	NA	62245561	62262933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.66	chr13	+	2393	5	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	0	974	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	261.077574678485	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCATATTTGTGTGTT	NA	False	NA	NA	False	ATTAAA	-41	NA	62245561	62260835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62246443_62254561_62254689_62254881_62254943_62259162_62259858_62260206
ES.9407.67	chr13	+	5486	3	ISM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-22	-358	0	288	intron_retention	FALSE	canonical	3	481	junction_1	33	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTAATGGTGT	NA	False	NA	6	True	NA	NA	NA	62245561	62260149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_62245653_62254561_62254689_62254881
ES.9407.68	chr13	+	4168	4	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	1	1355	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	246.649999436899	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	8	True	AATAAA	-20	NA	62245562	62261216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62245653_62252725_62254689_62254881_62254943_62259162
ES.9407.69	chr13	+	974	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	-19	-69	3	-1	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTGTATATCCTTGGA	NA	False	NA	3	True	NA	NA	NA	62245564	62259860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ES.9407.7	chr13	+	476	4	NNC	ENSMUSG00000113626.2	novel	353	2	NA	NA	-32653	-12	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	62.9408893769031	188	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATAAAAAAGATCCT	NA	False	NA	NA	False	NA	NA	NA	61919417	61974314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_61919514_61928416_61928544_61928736_61928798_61974122
ES.9407.70	chr13	+	5421	1	Intergenic	novelGene_7701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACTGACATGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	62245706	62251127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62245700_62251100
ES.9407.71	chr13	+	2563	2	NIC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-4966	285	intron_retention	FALSE	canonical	3	66	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	62253287	62260146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_62254943_62259238
ES.9407.72	chr13	+	6210	3	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-4173	971	intron_retention	FALSE	non_canonical	0	0	junction_2	273.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	62254080	62260832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62254689_62254881_62259858_62260206
ES.9407.73	chr13	+	1080	3	ISM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	9016	-709	-3676	285	3prime_fragment	FALSE	canonical	3	66	junction_2	240.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGCCTTGGTAATGG	NA	False	NA	3	True	NA	NA	NA	62254577	62260146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_62254689_62254881_62254943_62259238
ES.9407.74	chr13	+	3165	3	NNC	ENSMUSG00000113566.2	novel	886	4	NA	NA	-3674	2115	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	256	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTCTATCTCATAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	62254579	62261976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62254689_62254881_62254943_62258981
ES.9407.75	chr13	+	1650	2	ISM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	9321	-1391	-3371	967	3prime_fragment	FALSE	canonical	3	66	junction_1	0	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGGGTGCATATTT	NA	False	NA	NA	False	ATTAAA	-34	NA	62254882	62260828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_62254943_62259238
ES.9407.76	chr13	+	4545	1	Genic_Genomic	ENSMUSG00000113566.2	novel	NA	NA	NA	NA	728	3665	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	62258981	62263526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_62259000_62263500
ES.9407.77	chr13	+	1282	1	Intergenic	novelGene_7702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGCTTTTCAGGAGAGC	5087	False	NA	NA	False	AATAAA	-16	NA	62268705	62269987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62268700_62270000
ES.9407.78	chr13	+	1713	1	FSM	ENSMUSG00000113504.2	ENSMUST00000221048.2	278	1	-802	-633	-802	633	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAATGTATAA	9122	False	NA	NA	False	NA	NA	NA	62272740	62274453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62272700_62274500
ES.9407.79	chr13	+	155	2	Intergenic	novelGene_7704	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	483	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	62276280	62282532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62276306_62282402
ES.9407.8	chr13	+	1517	5	Intergenic	novelGene_7693	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	12.7744862910412	58	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTCAAAAGCCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	61919421	61935000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61919514_61920220_61920316_61928416_61928544_61928736_61928798_61933858
ES.9407.80	chr13	+	3151	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-61	-519	-31	519	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277668	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ES.9407.81	chr13	+	3169	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	-8	519	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	126.207170953159	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277691	62321752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62295299_62295341_62317255_62317383_62317567_62317629_62318963
ES.9407.82	chr13	+	4778	6	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	0	2782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	114.499606986225	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTCGTTTAATTTTAT	NA	False	NA	14	True	AATAAA	-15	NA	62277699	62324015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963_62321980_62322536_62323626_62323673
ES.9407.84	chr13	+	3528	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	4	516	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.079699401596	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62277703	62321749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277977_62315229_62315511_62317255_62317383_62317567_62317629_62318963
ES.9407.85	chr13	+	5382	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	-25	-2786	5	2786	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTTAATTTTATTTAT	NA	False	NA	18	True	AATAAA	-19	NA	62277704	62324019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ES.9407.86	chr13	+	4326	6	NIC	ENSMUSG00000074867.5	novel	1560	5	NA	NA	1	2640	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	19.2561678430575	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCACAGATGTTTATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	62277716	62386598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_62277843_62351245_62351373_62351567_62351629_62381070_62381198_62381382_62381444_62382774
ES.9407.87	chr13	+	3204	4	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	-6	493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.90766547201	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	62277723	62321726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277977_62317255_62317383_62317567_62317629_62318963
ES.9407.88	chr13	+	3261	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	-6	517	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127.297633520816	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62277723	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277832_62278933_62279112_62317255_62317383_62317567_62317629_62318963
ES.9407.89	chr13	+	3032	3	FSM	ENSMUSG00000074867.5	ENSMUST00000221772.2	1379	3	25	-1678	-5	517	multi-exon	FALSE	canonical	3	18	junction_2	31.5	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62277724	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62277843_62317255_62317383_62318963
ES.9407.9	chr13	+	2070	5	Intergenic	novelGene_7694	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	72.8903285765677	59	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTCTAGGCATGTAAAT	NA	False	NA	8	True	AATAAA	-21	NA	61919424	61935480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_61919514_61920220_61920316_61928416_61928544_61928736_61928798_61933782
ES.9407.90	chr13	+	3257	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	-5	520	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	125.150659207213	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTCGT	NA	False	NA	NA	False	NA	NA	NA	62277724	62321753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62289822_62289984_62317255_62317383_62317567_62317629_62318963
ES.9407.91	chr13	+	3498	7	NNC	ENSMUSG00000074867.5	novel	1560	5	NA	NA	-3	5334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.0350237038664	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTGTTGATTATTTAT	NA	False	NA	5	True	ATTAAA	-22	NA	62277726	62389292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62351245_62351373_62351567_62351629_62381070_62381198_62381382_62381444_62382774_62385621_62389132
ES.9407.92	chr13	+	5027	9	NNC	ENSMUSG00000074867.5	novel	1560	5	NA	NA	-2	2760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.7113092008021	688	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTAAGTGGTCCATTGT	NA	False	NA	NA	False	AATGAA	-17	NA	62277727	62386718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62278045_62278154_62351245_62351373_62351567_62351629_62364502_62364658_62365567_62365897_62381070_62381198_62381382_62381444_62382774
ES.9407.93	chr13	+	3073	4	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	-2	517	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	126.129563016236	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62277727	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62317272_62317383_62317567_62317629_62318963
ES.9407.94	chr13	+	1006	5	NNC	ENSMUSG00000074867.5	novel	2571	4	NA	NA	0	517	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	127.297633520816	558	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62277729	62321750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62317262_62317383_62317567_62317629_62318963_62319401_62321475
ES.9407.95	chr13	+	3296	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	9	-734	-8	734	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGACATGGTTCTGAAA	NA	False	NA	NA	False	TTTAAA	-30	NA	62277738	62321967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ES.9407.96	chr13	+	4828	6	NNC	ENSMUSG00000074867.5	novel	765	5	NA	NA	-7	3914	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.4	597	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTAAGACATTGTATG	NA	False	NA	NA	False	NA	NA	NA	62277739	62358213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62321929_62322072_62348993_62349200_62351245_62351373_62351567_62351629_62354024
ES.9407.97	chr13	+	4256	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	10	-1695	-7	1695	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTAATATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62277739	62322928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ES.9407.98	chr13	+	4399	3	NNC	ENSMUSG00000074867.5	novel	1379	3	NA	NA	-5	-35147	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.5	488	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	62277741	62284925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_62277843_62278045_62279878_62282459
ES.9408.1	chr13	+	230	1	Intergenic	novelGene_7718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTTGACTCAAAAGCTTAA	NA	False	NA	NA	False	NA	NA	NA	62562117	62562347	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62562100_62562300
ES.9409.1	chr13	+	421	1	Intergenic	novelGene_7721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTATTCTCAACAATA	NA	False	NA	NA	False	NA	NA	NA	62637756	62638177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62637800_62638200
ES.9409.2	chr13	+	174	1	Intergenic	novelGene_7722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	62637759	62637933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62637800_62637900
ES.941.1	chr1	-	176	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	87186853	87186677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87186700_87186900
ES.9410.1	chr13	+	178	1	Intergenic	novelGene_7723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	62647223	62647401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62647200_62647400
ES.9411.1	chr13	+	177	1	Intergenic	novelGene_7724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGTA	NA	False	NA	NA	False	NA	NA	NA	62661182	62661359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62661200_62661400
ES.9412.1	chr13	+	154	1	Intergenic	novelGene_7726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAACAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62708847	62709001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62708800_62709000
ES.9413.1	chr13	+	3219	1	Intergenic	novelGene_7727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAGAGCAAGTGTGGTT	NA	False	NA	NA	False	NA	NA	NA	62712366	62715585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62712400_62715600
ES.9414.1	chr13	+	215	1	Intergenic	novelGene_7728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTGTTTCAGTCTCCC	NA	False	NA	NA	False	NA	NA	NA	62723342	62723557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62723300_62723600
ES.9415.1	chr13	+	172	2	Antisense	novelGene_ENSMUSG00000072066.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62759575	62764763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62759682_62764697
ES.9415.10	chr13	+	6886	1	Intergenic	novelGene_7737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62863163	62870049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62863200_62870000
ES.9415.11	chr13	+	387	1	Intergenic	novelGene_7738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	62906111	62906498	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62906100_62906500
ES.9415.12	chr13	+	6786	1	FSM	ENSMUSG00000119111.1	ENSMUST00000240393.1	108	1	-41	-6637	-41	6637	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAACTTGGTGGCAAG	NA	False	NA	NA	False	NA	NA	NA	62908511	62915297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_62908500_62915300
ES.9415.2	chr13	+	177	1	Intergenic	novelGene_7729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAAAATAAACAAGACA	NA	False	NA	NA	False	NA	NA	NA	62759576	62759753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62759600_62759800
ES.9415.3	chr13	+	234	2	Antisense	novelGene_ENSMUSG00000113078.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAATTCAAAAAGTCAG	NA	False	NA	NA	False	AAAACA	-40	NA	62759577	62896563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62759756_62896507
ES.9415.4	chr13	+	227	1	Intergenic	novelGene_7730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62764591	62764818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62764600_62764800
ES.9415.5	chr13	+	188	2	Intergenic	novelGene_7731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62764592	62945004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62764759_62944982
ES.9415.6	chr13	+	162	2	Intergenic	novelGene_7732	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62764594	62945004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62764708_62944955
ES.9415.7	chr13	+	263	1	Intergenic	novelGene_7734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAATCAATCA	NA	False	NA	NA	False	AATAAA	-8	NA	62823971	62824234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62824000_62824200
ES.9415.8	chr13	+	178	1	Antisense	novelGene_ENSMUSG00000113601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62829776	62829954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62829800_62830000
ES.9415.9	chr13	+	3561	2	Antisense	novelGene_ENSMUSG00000074863.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACACACACACACACAT	NA	False	NA	NA	False	NA	NA	NA	62851418	62855343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62853586_62853949
ES.9416.1	chr13	+	183	1	Intergenic	novelGene_7739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCGGGCGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	62945858	62946041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62945900_62946000
ES.9417.1	chr13	-	2598	1	Intergenic	novelGene_7689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	61899220	61896622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_61896600_61899200
ES.9418.1	chr13	-	168	1	Intergenic	novelGene_7703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATTTAGT	NA	False	NA	NA	False	NA	NA	NA	62275291	62275123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62275100_62275300
ES.9419.1	chr13	-	157	1	Intergenic	novelGene_7705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	62279981	62279824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62279800_62280000
ES.942.1	chr1	+	1781	5	FSM	ENSMUSG00000026255.16	ENSMUST00000118687.8	1726	5	-53	-2	-53	-1	multi-exon	FALSE	canonical	2	6	junction_4	2.58602010819715	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	1355	False	NA	NA	False	AATAAA	-24	NA	87192031	87238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382_87237569_87237693
ES.942.2	chr1	+	1906	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	-53	1	-53	-1	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	1355	False	NA	NA	False	AATAAA	-24	NA	87192031	87238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ES.942.3	chr1	+	1579	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2546	False	NA	NA	False	NA	NA	NA	87228470	87230049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87228500_87230000
ES.942.4	chr1	+	1552	2	FSM	ENSMUSG00000026255.16	ENSMUST00000150831.2	353	2	-103	-1096	-103	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	NA	False	NA	NA	False	AATAAA	-24	NA	87236844	87238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87237219_87237382
ES.942.5	chr1	+	1144	2	ISM	ENSMUSG00000026255.16	ENSMUST00000118687.8	1726	5	45207	-2	344	-1	3prime_fragment	FALSE	canonical	2	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	NA	False	NA	NA	False	AATAAA	-24	NA	87237291	87238560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87237569_87237693
ES.9420.1	chr13	-	2272	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-30	228248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.3363757563473	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	62564887	62322058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62322536_62549634_62551194_62555228_62555290_62555482_62555610_62564839
ES.9420.10	chr13	-	6478	1	Intergenic	novelGene_7715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCATGTGTCTATCCAT	NA	False	NA	NA	False	AATAAA	-15	NA	62515045	62508567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62508600_62515000
ES.9420.100	chr13	-	5057	2	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	2458	4	NA	NA	-139	1541	multi-exon	TRUE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGTTAGGAAGTATGT	9713	False	NA	NA	False	NA	NA	NA	62848999	62816571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821593_62848963
ES.9420.101	chr13	-	6380	3	ISM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	8285	-3020	-5757	1535	3prime_fragment	FALSE	canonical	3	94	junction_1	32.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATTGTTAGGAA	NA	False	NA	NA	False	NA	NA	NA	62824474	62816577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_62821755_62823062_62823124_62823332
ES.9420.102	chr13	-	5678	6	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	2859	7	NA	NA	-10	1534	multi-exon	FALSE	canonical	1	3	junction_3	94.4233022087239	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAATTGTTAGGA	6798	False	NA	NA	False	NA	NA	NA	62860577	62816578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821755_62823062_62823124_62823332_62823460_62853514_62853576_62853943_62854071_62860451
ES.9420.103	chr13	-	5137	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-35	-4487	-8	1177	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACACTTTCTGTTCCTTTC	NA	False	NA	NA	False	NA	NA	NA	62832767	62816935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ES.9420.104	chr13	-	1546	1	Genic_Genomic	ENSMUSG00000074863.6	novel	NA	NA	NA	NA	12454	865	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGGACTCCACCATAGA	NA	False	NA	NA	False	NA	NA	NA	62820278	62818732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_62818700_62820300
ES.9420.105	chr13	-	3251	8	NNC	ENSMUSG00000074863.6	novel	1765	7	NA	NA	-32	444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	90.9110352296717	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTAACTGGTCCATTCT	6776	False	NA	NA	False	AATGAA	-13	NA	62860599	62819153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62823460_62826640_62826711_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.106	chr13	-	5917	6	NNC	ENSMUSG00000074863.6	novel	559	6	NA	NA	2	19	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	94.7269760944579	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTAATTGCTTGGC	6810	False	NA	20	True	AATAAA	-39	NA	62860565	62819578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62826711_62853514_62853576_62853943_62854071_62860451
ES.9420.107	chr13	-	2521	4	NNC	ENSMUSG00000074863.6	novel	2458	4	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	65.2703778311588	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	False	NA	0	True	AATAAA	-19	NA	62832788	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62823495_62832646
ES.9420.108	chr13	-	2633	6	NIC	ENSMUSG00000074863.6	novel	2859	7	NA	NA	15	-1	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	94.4233022087239	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	6823	False	NA	0	True	AATAAA	-19	NA	62860552	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62821755_62823062_62823124_62823332_62823460_62853514_62853576_62853943_62854071_62860451
ES.9420.109	chr13	-	3244	8	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	-18	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	99.671501259213	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	False	NA	0	True	AATAAA	-19	NA	62908541	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821347_62848717_62849318_62853514_62853576_62853943_62854071_62871911_62872032_62886705_62886913_62894415_62894651_62908395
ES.9420.11	chr13	-	3830	5	NNC	ENSMUSG00000094942.8	novel	2310	4	NA	NA	-3	5867	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.6836190185269	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	62530994	62510274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62511338_62515687_62518166_62519376_62519438_62519623_62519751_62530893
ES.9420.111	chr13	-	2678	7	NIC	ENSMUSG00000074863.6	novel	1765	7	NA	NA	26	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	87.1966169068502	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	6834	False	NA	0	True	AATAAA	-19	NA	62860541	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62821755_62823062_62823124_62823332_62823460_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.112	chr13	-	2456	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	1	1	1	-1	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	False	NA	0	True	AATAAA	-19	NA	62832758	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ES.9420.113	chr13	-	2513	5	NNC	ENSMUSG00000074863.6	novel	615	4	NA	NA	-283	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	57.2581871875106	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	False	NA	0	True	AATAAA	-19	NA	62833042	62819598	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646_62832689_62832924
ES.9420.114	chr13	-	2709	7	NIC	ENSMUSG00000074863.6	novel	1765	7	NA	NA	2	-3	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	82.6043111600249	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTTCCTGGGAAAA	6810	False	NA	-2	True	AATAAA	-17	NA	62860565	62819600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62821755_62823062_62823124_62823332_62823469_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.115	chr13	-	2761	8	NNC	ENSMUSG00000074863.6	novel	1765	7	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	81.2592223965366	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTTCCTGGGAAAA	6800	False	NA	-2	True	AATAAA	-17	NA	62860575	62819600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62823460_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.116	chr13	-	4085	4	NNC	ENSMUSG00000074863.6	novel	2458	4	NA	NA	7889	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.2703778311588	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTGGTTCCTGGGAAAA	NA	False	NA	-2	True	AATAAA	-17	NA	62840971	62819600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62821755_62823062_62823124_62823332_62823460_62839228
ES.9420.117	chr13	-	2029	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-60	-1354	-33	412	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCGTGTACGAGTCATTC	NA	False	NA	NA	False	NA	NA	NA	62832792	62820068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ES.9420.118	chr13	-	1961	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	3	494	3	389	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGCAATGTGGTAAA	NA	False	NA	NA	False	NA	NA	NA	62832756	62820091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ES.9420.119	chr13	-	177	1	Intergenic	novelGene_7735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAAAAAGCAGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	62835805	62835628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62835600_62835800
ES.9420.12	chr13	-	8395	6	Fusion	ENSMUSG00000113623.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	-25	5864	multi-exon	FALSE	canonical	2	10	junction_3	56.1070405564221	401	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACTGTCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	62564882	62510277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62555228_62555290_62555482_62555610_62564751
ES.9420.120	chr13	-	5008	4	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-3	2615	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	78.7950929098168	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTGCTTTGTTCGTGGT	6805	False	NA	NA	False	NA	NA	NA	62860570	62844604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62860451
ES.9420.121	chr13	-	2548	1	FSM	ENSMUSG00000074863.6	ENSMUST00000222602.2	939	1	839	-2448	839	1746	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATCTTTTAAAT	NA	False	NA	NA	False	ACTAAA	-11	NA	62848021	62845473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62845500_62848000
ES.9420.122	chr13	-	3463	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	-21	1209	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.1690017226665	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTGATATGCAATGTGT	6787	False	NA	NA	False	NA	NA	NA	62860588	62846010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.123	chr13	-	2493	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	20	387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.408620039283	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6828	False	NA	0	True	AATAAA	-18	NA	62860547	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848483_62848565_62849125_62853514_62853576_62853943_62854071_62860451
ES.9420.124	chr13	-	2534	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	32	387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	110.897430087446	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6840	False	NA	0	True	AATAAA	-18	NA	62860535	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848428_62848509_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62860451
ES.9420.125	chr13	-	4488	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-22	387	intron_retention	FALSE	non_canonical	0	0	junction_1	116.556853080374	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6786	False	NA	0	True	AATAAA	-18	NA	62860589	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62853514_62853576_62853943_62856024_62860451
ES.9420.126	chr13	-	2545	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	27	387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.251618692469	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6835	False	NA	0	True	AATAAA	-18	NA	62860540	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848426_62848506_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.127	chr13	-	2487	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	26	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.408620039283	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6834	False	NA	0	True	AATAAA	-18	NA	62860541	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62853514_62853576_62853943_62854071_62860451
ES.9420.128	chr13	-	2606	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	14	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1690017226665	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6822	False	NA	0	True	AATAAA	-18	NA	62860553	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.129	chr13	-	3065	8	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	8	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.671501259213	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	NA	False	NA	0	True	AATAAA	-18	NA	62908498	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848488_62848571_62849126_62853514_62853576_62853943_62854071_62871911_62872032_62886705_62886913_62894415_62894654_62908395
ES.9420.13	chr13	-	3922	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	-6	-1606	-6	1606	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATTTAATTTTATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	62530997	62514535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ES.9420.130	chr13	-	3107	9	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	17	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	94.7559364894886	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	NA	False	NA	0	True	AATAAA	-18	NA	62908489	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62871911_62872032_62886705_62886913_62894415_62894654_62908395
ES.9420.131	chr13	-	2651	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	2	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.807848019002	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6810	False	NA	0	True	AATAAA	-18	NA	62860565	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855934_62856024_62860451
ES.9420.132	chr13	-	3393	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	20	387	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	101.086459143756	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTCTAGGCATGTA	6828	False	NA	0	True	AATAAA	-18	NA	62860547	62846832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848488_62848571_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62859658
ES.9420.133	chr13	-	3530	2	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-1587	386	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTGTCTAGGCATGT	8265	False	NA	-1	True	AATAAA	-17	NA	62850447	62846833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576
ES.9420.134	chr13	-	2580	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-10	385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.251618692469	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCTAGGCATG	6798	False	NA	-2	True	AATAAA	-16	NA	62860577	62846834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848500_62848580_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.135	chr13	-	2560	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	385	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	110.897430087446	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCTAGGCATG	6810	False	NA	-2	True	AATAAA	-16	NA	62860565	62846834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62860451
ES.9420.136	chr13	-	2518	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-8	385	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.408620039283	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCTAGGCATG	6800	False	NA	-2	True	AATAAA	-16	NA	62860575	62846834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848433_62848517_62849126_62853514_62853576_62853943_62854071_62860451
ES.9420.138	chr13	-	4513	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	385	intron_retention	FALSE	non_canonical	0	0	junction_1	104.252386063821	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCATGTGTCTAGGCATG	6810	False	NA	-2	True	AATAAA	-16	NA	62860565	62846834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848493_62848576_62849126_62849254_62849306_62853514_62853576_62853943_62856024_62860451
ES.9420.139	chr13	-	2561	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	382	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.251618692469	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCCATGTGTCTAGGC	6810	False	NA	-5	True	AATAAA	-13	NA	62860565	62846837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848512_62848596_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.14	chr13	-	2963	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	-39	-614	-39	614	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGATATGCATCCT	NA	False	NA	NA	False	NA	NA	NA	62531030	62515527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ES.9420.140	chr13	-	7612	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	895	5	intron_retention	TRUE	non_canonical	0	0	junction_1	110.691643767721	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTGCATATTTGTGTG	7703	False	NA	1	True	ATTAAA	-22	NA	62859672	62847214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848448_62848531_62849126_62849254_62849306_62853514_62853576_62853943_62857778_62857833
ES.9420.141	chr13	-	6427	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	20	5	intron_retention	TRUE	non_canonical	0	0	junction_1	104.251618692469	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTGCATATTTGTGTG	6828	False	NA	1	True	ATTAAA	-22	NA	62860547	62847214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848445_62848528_62849126_62849254_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.143	chr13	-	2445	5	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	3	79	junction_4	85.7448978073914	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGGGTGCATATTTG	6810	False	NA	-3	True	ATTAAA	-18	NA	62860565	62847218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.144	chr13	-	2389	4	NIC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	78.7950929098168	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGGGTGCATATTTG	6810	False	NA	-3	True	ATTAAA	-18	NA	62860565	62847218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62849306_62853514_62853576_62853943_62854071_62860451
ES.9420.145	chr13	-	4117	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	14	1	intron_retention	TRUE	non_canonical	0	0	junction_1	104.252386063821	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATGGGTGCATATTTG	6822	False	NA	-3	True	ATTAAA	-18	NA	62860553	62847218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848471_62848554_62849126_62849254_62849306_62853514_62853576_62853943_62856024_62860451
ES.9420.147	chr13	-	2320	8	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.2272742451564	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	6833	False	NA	-4	True	ATTAAA	-17	NA	62860542	62847219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848445_62848528_62849126_62849254_62849306_62852431_62852544_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.148	chr13	-	4128	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_1	104.252386063821	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	6810	False	NA	-4	True	ATTAAA	-17	NA	62860565	62847219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848448_62848531_62849126_62849254_62849306_62853514_62853576_62853943_62856024_62860451
ES.9420.149	chr13	-	2162	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	20	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.251618692469	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	6828	False	NA	-4	True	ATTAAA	-17	NA	62860547	62847219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848455_62848538_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.15	chr13	-	2322	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	-15	3	-15	-3	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGTGTGGATCAG	NA	False	NA	-15	True	NA	NA	NA	62531006	62516144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ES.9420.150	chr13	-	2148	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	123.408620039283	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	6786	False	NA	-4	True	ATTAAA	-17	NA	62860589	62847219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848468_62848551_62849126_62853514_62853576_62853943_62854071_62860451
ES.9420.151	chr13	-	3986	4	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	4520	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	134.350288425444	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACTATGGGTGCATATT	2665	False	NA	-5	True	ATTAAA	-16	NA	62856047	62847220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848445_62848528_62849126_62853514_62853576_62853943
ES.9420.152	chr13	-	2141	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	2	-40	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.251618692469	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCATTTTAAGTCCAT	6810	False	NA	-44	True	TTTAAA	-5	NA	62860565	62847259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848510_62848592_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.153	chr13	-	2057	5	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	29	-40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.408620039283	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCATTTTAAGTCCAT	6837	False	NA	-44	True	TTTAAA	-5	NA	62860538	62847259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848488_62848571_62849126_62853514_62853576_62853943_62854071_62860451
ES.9420.154	chr13	-	1669	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	2	140	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	95.1690017226665	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATATTGTATTGGCA	6810	False	NA	NA	False	NA	NA	NA	62860565	62847781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848431_62848514_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.155	chr13	-	1423	6	NNC	ENSMUSG00000074863.6	novel	2509	5	NA	NA	14	-43	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.251618692469	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTATAGCCTCCAAAGAC	6822	False	NA	NA	False	NA	NA	NA	62860553	62847964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848488_62848571_62849126_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.156	chr13	-	1482	7	NNC	ENSMUSG00000074863.6	novel	1171	7	NA	NA	2	-47	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	95.1690017226665	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACACTATAGCCTCCAA	6810	False	NA	NA	False	NA	NA	NA	62860565	62847968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62848488_62848571_62849126_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.157	chr13	-	3665	1	Intergenic	novelGene_7736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTTCTAGAGAGTTC	2361	False	NA	NA	False	NA	NA	NA	62865014	62861349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62861300_62865000
ES.9420.16	chr13	-	2265	3	FSM	ENSMUSG00000094942.8	ENSMUST00000202194.2	736	3	-46	-1483	-20	-4	multi-exon	FALSE	canonical	1	2	junction_1	20.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGTGTGTGGATCA	NA	False	NA	-16	True	NA	NA	NA	62531011	62516145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62518166_62519623_62519751_62530893
ES.9420.17	chr13	-	2389	5	Fusion	ENSMUSG00000113865.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	-596	-4	multi-exon	FALSE	canonical	2	2	junction_4	31.1207326391909	188	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTGTGTGTGGATCA	NA	False	NA	-16	True	NA	NA	NA	62536343	62516145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62535465_62535618_62536314
ES.9420.18	chr13	-	2363	5	Fusion	ENSMUSG00000113623.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	11	-5	multi-exon	FALSE	canonical	0	0	junction_2	65.5147884068933	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTTGTGTGTGGATC	NA	False	NA	-17	True	NA	NA	NA	62564846	62516146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62518166_62519376_62519438_62555228_62555290_62555482_62555610_62564751
ES.9420.19	chr13	-	2491	6	Fusion	ENSMUSG00000113623.2_ENSMUSG00000094942.8	novel	2310	4	NA	NA	10	-5	multi-exon	FALSE	canonical	2	10	junction_3	56.1070405564221	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTTGTGTGTGGATC	NA	False	NA	-17	True	NA	NA	NA	62564847	62516146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62518166_62519376_62519438_62519623_62519751_62555228_62555290_62555482_62555610_62564751
ES.9420.2	chr13	-	2260	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-15	228239	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	64.1467068523397	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTTGAGTACGGTCTC	NA	False	NA	NA	False	NA	NA	NA	62564872	62322067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62322536_62508708_62508716_62549641_62551118_62555228_62555290_62555482_62555610_62564751
ES.9420.20	chr13	-	1819	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	4	487	4	48	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAATTCTACGAAGGA	NA	False	NA	NA	False	NA	NA	NA	62530987	62516628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ES.9420.21	chr13	-	178	1	Intergenic	novelGene_7716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62524606	62524428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62524400_62524600
ES.9420.22	chr13	-	176	2	Intergenic	novelGene_7717	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62547774	62524428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62524509_62547678
ES.9420.23	chr13	-	4918	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-31	9173	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.243025333511	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTTTTCAGGAGAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	62564888	62541133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62544505_62549971_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.24	chr13	-	1815	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-6	6095	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.243025333511	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGTAGGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	62564863	62544211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62544505_62549971_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.25	chr13	-	4595	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-4044	3517	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	66.8631998935139	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACACATTGAATGTTT	NA	False	NA	NA	False	AGTAAA	-6	NA	62559736	62546789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62547581_62547783_62551194_62555228_62555290_62555482_62555610_62559530
ES.9420.26	chr13	-	4399	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	12	3509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.1570591324911	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCTAACTAACACATT	NA	False	NA	NA	False	NA	NA	NA	62564845	62546797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62547581_62547783_62551118_62555228_62555290_62555482_62555610_62564751
ES.9420.27	chr13	-	4584	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	57	-4008	27	3460	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCTTTGTTCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	62564800	62546846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.28	chr13	-	3993	5	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	12	3027	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.243025333511	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCATGTCACATGCC	NA	False	NA	NA	False	NA	NA	NA	62564845	62547279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62547576_62547778_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.29	chr13	-	4541	7	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	0	2971	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0.763762615825973	306	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62564857	62547335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62547575_62547777_62551194_62555482_62555610_62559530_62559782_62559978_62560013_62563958_62564327_62564751
ES.9420.3	chr13	-	2320	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-33	228237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.8703322020167	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTTTGAGTACGGTC	NA	False	NA	NA	False	NA	NA	NA	62564890	62322069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62322536_62549634_62551194_62555228_62555290_62555482_62555610_62557419_62557476_62564839
ES.9420.30	chr13	-	3359	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-8	-2718	-8	2170	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTTTTAAATGT	NA	False	NA	NA	False	ACTAAA	-11	NA	62564865	62548136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.31	chr13	-	2737	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	15	1647	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	48.0300831655421	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTGTGTATATATTAT	NA	False	NA	NA	False	AATATA	-12	NA	62564842	62548659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551118_62555228_62555290_62555482_62555610_62564751
ES.9420.32	chr13	-	2790	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-30	-2127	-30	1579	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTCATAAAAATATAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	62564887	62548727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.33	chr13	-	2267	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-33	-1601	-33	1053	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGTGTTGGTTTTTA	NA	False	NA	NA	False	AGTAAA	-42	NA	62564890	62549253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.34	chr13	-	2110	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-25	-1452	-25	904	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTGATGATCTCAT	NA	False	NA	NA	False	AAAACA	-22	NA	62564882	62549402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.35	chr13	-	2188	6	Fusion	ENSMUSG00000113450.2_ENSMUSG00000113623.2	novel	633	4	NA	NA	-8	817	multi-exon	FALSE	canonical	1	2	junction_3	54.6355195820448	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTAGGCATGTAAA	9530	False	NA	NA	False	AATAAA	-20	NA	62614628	62549489	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62551194_62555228_62555290_62555482_62555610_62604500_62604562_62604746_62604874_62614520
ES.9420.36	chr13	-	1563	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-29	429	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	48.0300831655421	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGGGTGCATATTT	NA	False	NA	NA	False	ATTAAA	-34	NA	62564886	62549877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551118_62555228_62555290_62555482_62555610_62564751
ES.9420.37	chr13	-	1630	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-20	-977	-20	429	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGGGTGCATATTT	NA	False	NA	NA	False	ATTAAA	-34	NA	62564877	62549877	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.38	chr13	-	1557	3	NIC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-13	424	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	60.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564870	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62551194_62555482_62555610_62564751
ES.9420.39	chr13	-	1803	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	12	424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	60.5587318229172	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564845	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551118_62555228_62555290_62555482_62555610_62559530_62559794_62559989_62560013_62564751
ES.9420.4	chr13	-	181	1	Intergenic	novelGene_7711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATGGTTTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	62407360	62407179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62407200_62407400
ES.9420.40	chr13	-	1798	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-12	424	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	61.6459424635736	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564869	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551375_62555228_62555290_62555482_62555610_62564751
ES.9420.41	chr13	-	1898	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-8	424	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.1717730309679	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564865	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62564751
ES.9420.42	chr13	-	1826	7	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-20	424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	62.547093368828	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564877	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62550642_62550725_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62564751
ES.9420.43	chr13	-	1877	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	15	424	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	65.1717730309679	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATAAAACTTTGGGTGCA	NA	False	NA	NA	False	ATTAAA	-29	NA	62564842	62549882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551194_62555228_62555290_62555482_62555610_62559530_62559790_62559984_62560013_62564751
ES.9420.44	chr13	-	1929	7	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-13	336	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	62.547093368828	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAAGCCCTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	62564870	62549970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62561132_62561247_62564751
ES.9420.45	chr13	-	1607	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-8	133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	65.1717730309679	303	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTCTCAGTAATTTTT	NA	False	NA	NA	False	ACTAAA	-13	NA	62564865	62550173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62564751
ES.9420.46	chr13	-	1275	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-31	-611	-31	63	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTGCACTTCACAGT	NA	False	NA	NA	False	NA	NA	NA	62564888	62550243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.47	chr13	-	1072	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-37	-402	-37	-146	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATAGTCTTAATCATCAT	NA	False	NA	NA	False	NA	NA	NA	62564894	62550452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.48	chr13	-	945	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	-33	-279	-33	-269	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGAATGTGGTGTATGT	NA	False	NA	NA	False	NA	NA	NA	62564890	62550575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.49	chr13	-	3800	1	Genic_Genomic	ENSMUSG00000113623.2	novel	NA	NA	NA	NA	-37	-9908	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTGACTGCACTGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	62564894	62561094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_62561100_62564900
ES.9420.5	chr13	-	4220	4	Fusion	ENSMUSG00000114172.2_ENSMUSG00000074865.12_ENSMUSG00000113495.2	novel	2021	2	NA	NA	-24321	89	intron_retention	FALSE	non_canonical	0	0	junction_1	47.1404520791032	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGACTTGGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	62815387	62484187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62488104_62667985_62668047_62790936_62791064_62815271
ES.9420.50	chr13	-	203	1	Intergenic	novelGene_7719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTTGTGCATAAATAAG	NA	False	NA	NA	False	NA	NA	NA	62575220	62575017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62575000_62575200
ES.9420.51	chr13	-	5048	1	FSM	ENSMUSG00000113841.2	ENSMUST00000221260.2	2293	1	2140	-4895	2140	4895	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGACTTTGAAGTTTA	5053	False	NA	NA	False	NA	NA	NA	62597283	62592235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62592200_62597300
ES.9420.52	chr13	-	5422	5	Fusion	ENSMUSG00000113841.2_ENSMUSG00000113450.2	novel	2492	4	NA	NA	3	1171	multi-exon	FALSE	non_canonical	0	0	junction_1	16.8597153000874	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTGAGGTGATCAAATA	9515	False	NA	NA	False	NA	NA	NA	62614643	62595959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62599175_62601111_62603008_62604500_62604562_62604746_62604874_62614520
ES.9420.53	chr13	-	3994	5	Fusion	ENSMUSG00000113841.2_ENSMUSG00000113450.2	novel	2492	4	NA	NA	1	-251	multi-exon	FALSE	non_canonical	0	0	junction_1	16.8597153000874	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCCTTGATGGAAGTA	9539	False	NA	NA	False	AATATA	-20	NA	62614619	62597381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62599176_62601094_62603008_62604500_62604562_62604746_62604874_62614520
ES.9420.54	chr13	-	2930	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	7	-445	7	445	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGGACCACTTGTTT	9519	False	NA	NA	False	NA	NA	NA	62614639	62600384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ES.9420.55	chr13	-	2821	3	FSM	ENSMUSG00000113450.2	ENSMUST00000223247.2	1949	3	29	-901	16	445	multi-exon	FALSE	canonical	3	10	junction_1	14.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGGACCACTTGTTT	9567	False	NA	NA	False	NA	NA	NA	62614591	62600384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62603008_62604746_62604874_62614520
ES.9420.56	chr13	-	2421	3	FSM	ENSMUSG00000113450.2	ENSMUST00000223247.2	1949	3	-5	-467	-5	11	multi-exon	FALSE	canonical	3	10	junction_1	14.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGTGGTTAAAAGGCT	9533	False	NA	NA	False	NA	NA	NA	62614625	62600818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62603008_62604746_62604874_62614520
ES.9420.57	chr13	-	2479	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	-9	22	-9	-22	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATAATAAT	9503	False	NA	NA	False	NA	NA	NA	62614655	62600851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ES.9420.58	chr13	-	2024	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	10	458	10	-2	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTGCATATCACAGT	9522	False	NA	-6	True	NA	NA	NA	62614636	62601287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ES.9420.59	chr13	-	3284	1	NIC	ENSMUSG00000113450.2	novel	2492	4	NA	NA	7190	-1407	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACGAAGCAAGGAAACAAT	NA	False	NA	NA	False	NA	NA	NA	62607417	62604133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62604100_62607400
ES.9420.6	chr13	-	2196	7	Fusion	ENSMUSG00000113450.2_ENSMUSG00000074865.12_ENSMUSG00000113623.2	novel	633	4	NA	NA	25	41748	multi-exon	TRUE	non_canonical	0	0	junction_1	61.369554521947	605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTATCCATGTAAATATT	NA	False	NA	NA	False	AATAAA	-24	NA	62718988	62508558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62508668_62549596_62551194_62555228_62555290_62555482_62555610_62604500_62604562_62604746_62604874_62718874
ES.9420.60	chr13	-	2870	2	Antisense	novelGene_ENSMUSG00002075814.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	62810119	62620859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_62622084_62808473
ES.9420.61	chr13	-	4314	2	Intergenic	novelGene_7720	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	62627546	62620861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62624257_62626627
ES.9420.62	chr13	-	4644	4	ISM	ENSMUSG00000074865.12	ENSMUST00000221250.2	1436	6	51602	5676	13418	1143	internal_fragment	FALSE	canonical	0	0	junction_3	65.7013444814234	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTCTATCTCATAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	62654847	62633316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_62635805_62640180_62640241_62640621_62640749_62652878
ES.9420.63	chr13	-	1668	4	FSM	ENSMUSG00000074865.12	ENSMUST00000222429.2	1653	4	-21	6	1	-6	multi-exon	FALSE	canonical	3	40	junction_2	51.4220013439989	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGGGTGCATATTT	NA	False	NA	-14	True	ATTAAA	-34	NA	62706442	62634465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62635805_62640180_62640241_62640621_62640749_62706300
ES.9420.64	chr13	-	2179	3	NNC	ENSMUSG00000074865.12	novel	2206	3	NA	NA	-13561	-1	intron_retention	FALSE	canonical	0	0	junction_2	15.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTGTGGACCAGTC	NA	False	NA	NA	False	NA	NA	NA	62681826	62664609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62668231_62668359_62681709
ES.9420.65	chr13	-	2295	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	-148	0	-24	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706473	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ES.9420.66	chr13	-	2262	4	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	6	0	intron_retention	FALSE	canonical	1	1	junction_3	12.4721912892465	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706437	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62668231_62668359_62670268_62670333_62706300
ES.9420.67	chr13	-	2177	3	NIC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	23	0	intron_retention	FALSE	canonical	3	31	junction_1	40	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62718990	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62666545_62668231_62668359_62718874
ES.9420.68	chr13	-	2156	4	NNC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	-81998	0	intron_retention	TRUE	non_canonical	0	0	junction_3	15.9234278833282	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62801011	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62668231_62668359_62706300_62706310_62800925
ES.9420.69	chr13	-	4652	3	ISM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	35437	0	-2623	0	3prime_fragment	FALSE	canonical	3	40	junction_1	19	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62670888	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_62666545_62667985_62668047_62668231
ES.9420.7	chr13	-	1756	3	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	413	41744	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	50	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	3352	False	NA	NA	False	AATAAA	-20	NA	62555279	62508562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62508689_62549614_62551194_62555228
ES.9420.70	chr13	-	2217	4	NNC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	-81998	0	intron_retention	FALSE	canonical	3	28	junction_3	21.3124898175277	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62801011	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62800916
ES.9420.71	chr13	-	2281	5	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	-81998	0	intron_retention	FALSE	canonical	0	0	junction_4	30.1858824618397	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62801011	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62670268_62670333_62800916
ES.9420.72	chr13	-	2156	3	NNC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	-81998	0	intron_retention	FALSE	canonical	3	28	junction_2	1.5	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62801011	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62668231_62668359_62800916
ES.9420.73	chr13	-	2367	5	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	-81998	0	intron_retention	FALSE	canonical	0	0	junction_4	30.1858824618397	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62801011	62664610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62670268_62670419_62800916
ES.9420.74	chr13	-	2439	6	NNC	ENSMUSG00000074865.12	novel	677	5	NA	NA	-81998	-1	intron_retention	FALSE	canonical	0	0	junction_4	29.9225667348241	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62801011	62664611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62670268_62670333_62686180_62686340_62800916
ES.9420.75	chr13	-	2461	7	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	-81991	-1	intron_retention	TRUE	non_canonical	0	0	junction_3	29.8979746619882	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62801004	62664611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62686180_62686325_62705988_62706097_62706300_62706311_62800926
ES.9420.76	chr13	-	2289	6	NNC	ENSMUSG00000074865.12	novel	2439	5	NA	NA	-81991	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	31.3023960744222	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	False	NA	NA	False	NA	NA	NA	62801004	62664611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62682548_62682629_62706300_62706310_62800925
ES.9420.77	chr13	-	2317	6	NNC	ENSMUSG00000074865.12	novel	677	5	NA	NA	-81991	-24	intron_retention	FALSE	canonical	0	0	junction_3	31.3023960744222	202	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	62801004	62664634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62670065_62670133_62670268_62670333_62800916
ES.9420.78	chr13	-	2230	4	NNC	ENSMUSG00000074865.12	novel	2147	4	NA	NA	-267	-24	intron_retention	FALSE	canonical	0	0	junction_3	31.8468557666565	157	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	62706716	62664634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62666545_62667985_62668047_62668231_62668359_62706584
ES.9420.79	chr13	-	6197	3	NNC	ENSMUSG00000074865.12	novel	677	5	NA	NA	-82047	-4075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGTGGAGCATGTGT	NA	False	NA	NA	False	NA	NA	NA	62801060	62670450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62672052_62672170_62676623_62800916
ES.9420.8	chr13	-	2229	8	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-29	41744	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59.8450379850207	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATCCATGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	62564886	62508562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62508689_62549614_62550642_62550725_62551194_62555228_62555290_62555482_62555610_62559530_62559782_62559978_62560013_62564751
ES.9420.80	chr13	-	5319	2	Intergenic	novelGene_7725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	62682410	62671396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62675441_62681135
ES.9420.81	chr13	-	986	2	FSM	ENSMUSG00000074865.12	ENSMUST00000221279.2	879	2	1	-108	1	108	multi-exon	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	62719012	62699948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62700797_62718874
ES.9420.82	chr13	-	3466	2	NIC	ENSMUSG00000074865.12	novel	879	2	NA	NA	2	108	intron_retention	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	62719011	62699948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62703278_62718874
ES.9420.83	chr13	-	4016	1	NIC	ENSMUSG00000074865.12	novel	1436	6	NA	NA	-4	-2345	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGGATCTAGACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	62706417	62702401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62702400_62706400
ES.9420.84	chr13	-	2845	2	Antisense	novelGene_ENSMUSG00002075814.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACCTAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	62797656	62717588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_62717672_62794894
ES.9420.85	chr13	-	2585	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	51	4	49	-4	multi-exon	FALSE	canonical	3	9	junction_2	2	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATTGGCTAATATCTG	NA	False	NA	NA	False	NA	NA	NA	62771945	62750830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62753195_62755186_62755314_62771851
ES.9420.86	chr13	-	2223	4	FSM	ENSMUSG00000072066.8	ENSMUST00000223338.2	1457	4	2	-768	2	-474	multi-exon	TRUE	canonical	3	9	junction_3	3.74165738677394	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGATCGGTTAAAGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	62771992	62751300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62753195_62754939_62755001_62755186_62755314_62771851
ES.9420.87	chr13	-	2030	3	FSM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	4	606	2	-606	multi-exon	FALSE	canonical	3	9	junction_2	2	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCTTGTGTGTGGACC	NA	False	NA	-26	True	NA	NA	NA	62771992	62751432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62753195_62755186_62755314_62771851
ES.9420.88	chr13	-	2482	2	Intergenic	novelGene_7733	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTACCAATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	62787276	62783854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_62786130_62787069
ES.9420.89	chr13	-	2387	4	NNC	ENSMUSG00000114172.2	novel	1732	3	NA	NA	-9952	551	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	33.8755893757667	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACTGTGTGAGTAATG	NA	False	NA	NA	False	NA	NA	NA	62801018	62787148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62789246_62790689_62790751_62790936_62791064_62800916
ES.9420.9	chr13	-	1896	6	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	-14	41741	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.3633436048812	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATGTGTCTATCCATGT	NA	False	NA	NA	False	AATAAA	-17	NA	62564841	62508565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62508689_62549614_62550642_62550725_62551194_62555228_62555290_62555482_62555610_62564751
ES.9420.90	chr13	-	621	4	NNC	ENSMUSG00000114172.2	novel	1732	3	NA	NA	-9960	-1223	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	33.8755893757667	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGTAGTCTCCAAACA	NA	False	NA	-2	True	NA	NA	NA	62801026	62788922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62789246_62790689_62790751_62790936_62791064_62800916
ES.9420.91	chr13	-	7229	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	42	-4813	15	3328	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTCGTGTTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	62832717	62814784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ES.9420.92	chr13	-	7113	6	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	559	6	NA	NA	10	2980	multi-exon	FALSE	canonical	3	25	junction_3	87.9377052236411	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAAG	6818	False	NA	NA	False	NA	NA	NA	62860557	62815132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821755_62823062_62823124_62823332_62823469_62853514_62853576_62853943_62854071_62860451
ES.9420.93	chr13	-	7224	7	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	1765	7	NA	NA	-5188	2980	multi-exon	FALSE	canonical	0	0	junction_3	98.0272071076869	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAAG	4664	False	NA	NA	False	NA	NA	NA	62854048	62815132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821755_62823062_62823124_62823332_62823469_62844637_62844826_62849254_62849306_62853514_62853576_62853943
ES.9420.94	chr13	-	7880	3	ISM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	8230	-4465	-5812	2980	3prime_fragment	FALSE	canonical	3	94	junction_1	32.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	62824529	62815132	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_62821755_62823062_62823124_62823332
ES.9420.95	chr13	-	7262	9	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	1765	7	NA	NA	33	2959	multi-exon	FALSE	canonical	0	0	junction_3	85.3873526934756	250	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6841	False	NA	NA	False	NA	NA	NA	62860534	62815153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821755_62823062_62823124_62823332_62823460_62839228_62839324_62849254_62849306_62853514_62853576_62853943_62854071_62855967_62856024_62860451
ES.9420.96	chr13	-	6906	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-26	-6265	1	2955	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGAGAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62832758	62815157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ES.9420.97	chr13	-	5970	6	Fusion	ENSMUSG00000113473.2_ENSMUSG00000074863.6	novel	559	6	NA	NA	10	1837	multi-exon	FALSE	canonical	3	25	junction_3	87.9377052236411	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGTCGCTATTT	6818	False	NA	NA	False	NA	NA	NA	62860557	62816275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_62821755_62823062_62823124_62823332_62823469_62853514_62853576_62853943_62854071_62860451
ES.9420.98	chr13	-	5498	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221999.2	615	4	-31	-4852	-4	1542	multi-exon	FALSE	canonical	3	52	junction_3	44.0176732183285	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTTAGGAAGTATGTA	NA	False	NA	NA	False	NA	NA	NA	62832763	62816570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823469_62832646
ES.9420.99	chr13	-	5443	4	FSM	ENSMUSG00000113473.2_ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	42	-3027	15	1542	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTTAGGAAGTATGTA	NA	False	NA	NA	False	NA	NA	NA	62832717	62816570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ES.9421.1	chr13	-	6653	2	NNC	ENSMUSG00000091183.6	novel	1743	3	NA	NA	2980	4950	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATGATCTTCCTGA	NA	False	NA	NA	False	NA	NA	NA	62921923	62915063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62915265_62915471
ES.9421.10	chr13	-	2176	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	15	1088	-9	320	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAGCTACGAAGGA	NA	False	NA	NA	False	NA	NA	NA	62933607	62921101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.11	chr13	-	762	7	NNC	ENSMUSG00000091183.6	novel	3279	4	NA	NA	-27410	-1324	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0053407832663	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATGTCCCAGTCTTC	7705	False	NA	NA	False	NA	NA	NA	62961032	62922745	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62922977_62924530_62924592_62924776_62924904_62941221_62941282_62941967_62942029_62942229_62942357_62960937
ES.9421.2	chr13	-	4317	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	-1	-1037	-1	1037	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCGTTTAATTTTATTTA	NA	False	NA	NA	False	AGTAAA	-18	NA	62933623	62918976	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.3	chr13	-	3997	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	18	-736	-6	736	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGAGAGAGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	62933604	62919277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.4	chr13	-	5545	3	NIC	ENSMUSG00000091183.6	novel	3279	4	NA	NA	0	736	intron_retention	FALSE	canonical	3	25	junction_2	1	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGAGAGAGAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	62933598	62919277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_62924592_62924776_62924904_62933494
ES.9421.5	chr13	-	3832	5	NNC	ENSMUSG00000091183.6	novel	3279	4	NA	NA	-4	717	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.9687092035858	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAACAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62933626	62919296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62921916_62922083_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.6	chr13	-	3280	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	-1	0	-1	0	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACTGGTATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62933623	62920013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.7	chr13	-	1588	5	NNC	ENSMUSG00000091183.6	novel	3279	4	NA	NA	-8	-619	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.9687092035858	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTGTGTGGACCAGT	NA	False	NA	0	True	NA	NA	NA	62933606	62920632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62920884_62921939_62922977_62924530_62924592_62924776_62924904_62933494
ES.9421.8	chr13	-	2481	3	FSM	ENSMUSG00000091183.6	ENSMUST00000167516.3	1743	3	50	-788	50	-620	multi-exon	FALSE	canonical	3	27	junction_2	1.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTGTGTGTGGACCAG	NA	False	NA	-1	True	NA	NA	NA	62924853	62920633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62922977_62924530_62924592_62924776
ES.9421.9	chr13	-	2127	5	NNC	ENSMUSG00000091183.6	novel	3279	4	NA	NA	1	-623	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.9687092035858	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAACTTGTGTGTGGAC	NA	False	NA	-4	True	NA	NA	NA	62933597	62920636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_62922000_62922503_62922977_62924530_62924592_62924776_62924904_62933494
ES.9422.1	chr13	+	137	1	Antisense	novelGene_ENSMUSG00000114117.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTGAAAAAAAAAGTGCA	NA	False	NA	NA	False	AATAAA	-13	NA	62963185	62963322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_62963200_62963300
ES.9423.1	chr13	+	183	1	Intergenic	novelGene_7740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAATCAGACACA	NA	False	NA	NA	False	NA	NA	NA	62987502	62987685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_62987500_62987700
ES.9424.1	chr13	-	1362	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	-15	7	-15	-7	multi-exon	FALSE	canonical	3	121	junction_2	7.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTCTTGTTATGGG	NA	False	NA	-5	True	AATAAA	-13	NA	63006251	62984697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
ES.9425.1	chr13	-	180	1	Intergenic	novelGene_7741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCCTGTGG	NA	False	NA	NA	False	NA	NA	NA	63033069	63032889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63032900_63033100
ES.9426.1	chr13	+	2261	16	NNC	ENSMUSG00000021458.18	novel	718	8	NA	NA	-17	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4392263576232	171	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCTTCTGAATTTGAT	3680	False	NA	9	True	AATAAA	-23	NA	63112689	63450102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63112762_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.10	chr13	+	1365	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220884.2	772	7	-78	1561	1	-1	5prime_fragment	FALSE	canonical	3	67	junction_1	29.0387671914632	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGTAATGTTTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	63387843	63447485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ES.9426.11	chr13	+	5748	3	FSM	ENSMUSG00000113326.2_ENSMUSG00000021458.18	ENSMUST00000221938.2	268	3	6	-5486	6	30	multi-exon	FALSE	canonical	0	0	junction_2	33.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	63387851	63394092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63387970_63388070_63388146_63388537
ES.9426.12	chr13	+	4528	5	ISM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	40	-591	-5	2	intron_retention	FALSE	canonical	3	67	junction_1	29.0387671914632	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACTCTGGCCTTGCT	NA	False	NA	28	True	AATAAA	-28	NA	63387882	63450687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ES.9426.13	chr13	+	2197	1	Intergenic	novelGene_7746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCATAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	63410259	63412456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_63410300_63412500
ES.9426.14	chr13	+	1474	5	NNC	ENSMUSG00000021458.18	novel	587	3	NA	NA	-48	-10	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	51.3681564785033	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGCTCTCAGAAGCAC	NA	False	NA	16	True	AATAAA	-16	NA	63420581	63450675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63420624_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.15	chr13	+	1466	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-459	-89	-17	1	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTGCTTCTGAATTT	NA	False	NA	6	True	AATAAA	-20	NA	63420612	63450099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.16	chr13	+	1653	5	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	-16	-1	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	55.0516802650019	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGTAATGTTTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	63420613	63447485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63420920_63421039_63421223_63429955_63430073_63444671_63444759_63446525
ES.9426.17	chr13	+	1991	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	300	-828	-15	0	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63420614	63450685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.18	chr13	+	1254	4	NNC	ENSMUSG00000021458.18	novel	1754	4	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	58.7026404857567	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCACTTCTGTGTAAT	NA	False	NA	NA	False	ATTAAA	-27	NA	63420617	63447478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63420715_63429955_63430073_63444671_63444759_63446525
ES.9426.19	chr13	+	2799	4	NNC	ENSMUSG00000021458.18	novel	1754	4	NA	NA	-12	2497	intron_retention	FALSE	canonical	0	0	junction_2	11.7851130197758	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGGTTCTGTGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	63420617	63437175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63421223_63429955_63430073_63434628_63434692_63435161
ES.9426.2	chr13	+	3305	17	NNC	ENSMUSG00000021458.18	novel	3249	16	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.1275361573091	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTTCTGTGTAATGTTT	3709	False	NA	NA	False	ATTAAA	-31	NA	63112718	63447482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63112834_63162839_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63446909
ES.9426.20	chr13	+	10483	3	NNC	ENSMUSG00000021458.18	novel	1754	4	NA	NA	-12	-2489	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	0.5	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAACTTACGGCACCTA	NA	False	NA	NA	False	NA	NA	NA	63420617	63440493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63420715_63429955_63432341_63432492
ES.9426.21	chr13	+	4969	4	FSM	ENSMUSG00000021458.18_ENSMUSG00000065475.4_ENSMUSG00000105904.3_ENSMUSG00000065599.4	ENSMUST00000223204.2	1754	4	-12	-3203	-12	0	multi-exon	FALSE	canonical	2	25	junction_1	47.8632310744781	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63420617	63450685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525
ES.9426.22	chr13	+	1768	4	FSM	ENSMUSG00000021458.18	ENSMUST00000223204.2	1754	4	-11	-3	-11	-1	multi-exon	FALSE	canonical	2	25	junction_1	47.8632310744781	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGTAATGTTTATT	NA	False	NA	NA	False	ATTAAA	-34	NA	63420618	63447485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525
ES.9426.23	chr13	+	1905	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-312	-675	-88	0	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63420759	63450685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.24	chr13	+	1691	6	NIC	ENSMUSG00000021458.18	novel	918	5	NA	NA	8	2	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	55.3591907455302	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACTCTGGCCTTGCT	NA	False	NA	28	True	AATAAA	-28	NA	63420855	63450687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63420920_63421039_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.25	chr13	+	1163	5	ISM	ENSMUSG00000021458.18	ENSMUST00000220885.2	894	6	541	-241	8	0	3prime_fragment	FALSE	canonical	3	17	junction_1	48.7769156466458	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63420855	63450098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63421164_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.26	chr13	+	6384	2	ISM	ENSMUSG00000021458.18	ENSMUST00000221164.2	459	3	2812	-4	-2635	1	3prime_fragment	FALSE	canonical	2	2	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTTAGTCTCACTGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	63423848	63442986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63430073_63442826
ES.9426.27	chr13	+	5546	2	ISM	ENSMUSG00000021458.18	ENSMUST00000223073.2	1376	5	3470	0	233	0	intron_retention	FALSE	canonical	3	125	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63429953	63450098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63430073_63444671
ES.9426.28	chr13	+	2721	1	Intergenic	novelGene_7747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTGAAAAAAAGAACTTAT	NA	False	NA	NA	False	AATAAA	-36	NA	63436882	63439603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_63436900_63439600
ES.9426.29	chr13	+	7242	1	FSM	ENSMUSG00000021458.18	ENSMUST00000221108.2	1599	1	-6230	587	-3750	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	5214	False	NA	5	True	AATAAA	-19	NA	63442856	63450098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63442900_63450100
ES.9426.3	chr13	+	179	1	Intergenic	novelGene_7742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAACTAAACAATT	NA	False	NA	NA	False	NA	NA	NA	63129301	63129480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_63129300_63129500
ES.9426.4	chr13	+	7345	1	FSM	ENSMUSG00000113326.2	ENSMUST00000220806.2	2028	1	-5287	-30	-5287	30	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	63386747	63394092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63386700_63394100
ES.9426.5	chr13	+	659	5	NNC	ENSMUSG00000021458.18	novel	348	5	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	28.5875847178456	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTAGTTAGTCTCACT	NA	False	NA	NA	False	AATAAA	-11	NA	63387805	63442982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63387970_63388070_63388146_63404851_63404999_63429955_63430073_63442826
ES.9426.6	chr13	+	1090	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-33	-2	-33	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	False	NA	5	True	AATAAA	-19	NA	63387809	63450098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.7	chr13	+	1672	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-26	-591	-26	2	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACTCTGGCCTTGCT	NA	False	NA	28	True	AATAAA	-28	NA	63387816	63450687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ES.9426.8	chr13	+	4001	5	ISM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	-18	-6	-18	4	intron_retention	FALSE	canonical	3	67	junction_1	29.0387671914632	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCTTCTGAATTTGAT	NA	False	NA	9	True	AATAAA	-23	NA	63387824	63450102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ES.9426.9	chr13	+	6152	2	ISM	ENSMUSG00000113326.2_ENSMUSG00000021458.18	ENSMUST00000221938.2	268	3	-6	-5486	-3	30	intron_retention	FALSE	canonical	3	67	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCATTTTGTTTAA	NA	False	NA	NA	False	NA	NA	NA	63387839	63394092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63387970_63388070
ES.9427.1	chr13	-	174	1	Intergenic	novelGene_7743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAGATAGAAA	7122	False	NA	NA	False	NA	NA	NA	63215792	63215618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63215600_63215800
ES.9428.1	chr13	-	284	1	Intergenic	novelGene_7744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAATGTTCTTATTG	NA	False	NA	NA	False	AATGAA	-15	NA	63385098	63384814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63384800_63385100
ES.9428.2	chr13	-	173	1	Intergenic	novelGene_7745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	63385097	63384924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63384900_63385100
ES.9429.1	chr13	-	6022	1	FSM	ENSMUSG00000113472.2	ENSMUST00000223367.2	2320	1	-390	-3312	-390	3312	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCACCACAGCACATAT	4318	False	NA	NA	False	AAAAAG	-36	NA	63427428	63421406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63421400_63427400
ES.943.1	chr1	-	300	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCGGGGCTCTATTTT	9891	False	NA	NA	False	NA	NA	NA	87209753	87209453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87209500_87209800
ES.9430.1	chr13	-	4397	1	Antisense	novelGene_ENSMUSG00000021458.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAGACTCCACCTCACA	NA	False	NA	NA	False	NA	NA	NA	63444573	63440176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_63440200_63444600
ES.9431.1	chr13	-	3138	16	FSM	ENSMUSG00000021461.18	ENSMUST00000073029.13	3165	16	40	-13	-11	13	multi-exon	TRUE	canonical	0	0	junction_1	32.7133000475342	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTATTGGAATAGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	63579519	63452512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63453683_63460476_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.10	chr13	-	3032	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	2	-5	intron_retention	FALSE	canonical	0	0	junction_2	45.6813115203824	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATATTCAGACCTTC	NA	False	NA	-12	True	AATAAA	-12	NA	63579557	63459573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63464997_63465082_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
ES.9431.11	chr13	-	3045	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	1	-6	intron_retention	FALSE	canonical	3	10	junction_15	36.5910735927038	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATTCAGACCTT	NA	False	NA	-13	True	AATAAA	-11	NA	63579535	63459574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
ES.9431.12	chr13	-	3207	17	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-13	-7	intron_retention	FALSE	non_canonical	0	0	junction_12	48.4122514839994	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTATATTCAGACCT	NA	False	NA	-14	True	AATAAA	-10	NA	63579521	63459575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545999_63547779_63547950_63548047_63548133_63550655_63550853_63553910_63554070_63579263
ES.9431.13	chr13	-	2635	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	5	471	3	125	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTTGCCCCATGTGAA	NA	False	NA	NA	False	NA	NA	NA	63579533	63459823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.14	chr13	-	2545	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-25	591	-4	5	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTGTCCTCCTGCACT	NA	False	NA	4	True	AGTAAA	-23	NA	63579563	63459943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.15	chr13	-	2375	15	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.4422507320783	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579519	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63464997_63465075_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
ES.9431.16	chr13	-	2753	17	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	49.3176882568516	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579519	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63547889_63547950_63548047_63548133_63550655_63550892_63553910_63554070_63579263
ES.9431.17	chr13	-	2547	12	NNC	ENSMUSG00000021461.18	novel	2288	14	NA	NA	3822	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	58.4218061858458	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63496164	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63492301_63492356_63492792_63492941_63495233_63495399_63495502
ES.9431.18	chr13	-	2716	17	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-13	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	47.9683733698569	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579521	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63547889_63547950_63548047_63548133_63550655_63550853_63553910_63554070_63579263
ES.9431.19	chr13	-	2455	15	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	31.7239367554739	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579562	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550770_63579263
ES.9431.2	chr13	-	3975	17	NNC	ENSMUSG00000021461.18	novel	3165	16	NA	NA	-7	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.1309867029207	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGTACTATTGGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	63579515	63452518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63454455_63454545_63454621_63460476_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.20	chr13	-	2298	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-11	1	-11	-1	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGAGTCCTTGTCCTCC	NA	False	NA	-2	True	AGTAAA	-17	NA	63579519	63459949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
ES.9431.21	chr13	-	2538	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	148	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_15	37.7544110741454	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGAGTCCTTGTCCTC	NA	False	NA	-3	True	AGTAAA	-16	NA	63578921	63459950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63578780
ES.9431.22	chr13	-	2588	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6849139389802	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	NA	False	NA	-4	True	AGTAAA	-15	NA	63579537	63459951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63464997_63465075_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.23	chr13	-	2573	15	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	30.5478046240141	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	NA	False	NA	-4	True	AGTAAA	-15	NA	63579560	63459951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
ES.9431.24	chr13	-	2704	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	47.1387549922802	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	NA	False	NA	-4	True	AGTAAA	-15	NA	63579540	63459951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63547780_63547950_63548047_63548133_63550655_63550853_63579242
ES.9431.25	chr13	-	2165	14	NNC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	3387	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	32.8917895907962	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	2599	False	NA	-4	True	AGTAAA	-15	NA	63550724	63459951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545840_63545992_63548047_63548133_63550655
ES.9431.26	chr13	-	2354	14	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	4	junction_8	33.8363622200145	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGAGTCCTTGTCCT	NA	False	NA	-4	True	AGTAAA	-15	NA	63579545	63459951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.27	chr13	-	2579	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	40.9680634424209	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGAGAGTGAGTCCTTG	NA	False	NA	-8	True	AGTAAA	-11	NA	63579558	63459955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63487691_63487743_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.28	chr13	-	1842	14	ISM	ENSMUSG00000021461.18	ENSMUST00000163091.8	2995	16	24	5579	-7	-834	5prime_fragment	FALSE	canonical	3	59	junction_13	19.1530738182254	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTACTTCAGTTCAC	NA	False	NA	NA	False	NA	NA	NA	63579515	63465147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.29	chr13	-	4605	9	NNC	ENSMUSG00000021461.18	novel	2529	9	NA	NA	-1	3464	intron_retention	FALSE	non_canonical	0	0	junction_6	44.0142022533636	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTTTGTGTTTAAGGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	63579537	63484739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63547889_63547950_63548047_63548133_63550655_63550853_63579263
ES.9431.3	chr13	-	3259	1	Genic_Genomic	ENSMUSG00000021461.18	novel	NA	NA	NA	NA	9428	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTCCAGTACTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	63455781	63452522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_63452500_63455800
ES.9431.30	chr13	-	174	1	Intergenic	novelGene_7748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAACAAGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	63491982	63491808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63491800_63492000
ES.9431.31	chr13	-	173	1	Intergenic	novelGene_7749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTAATAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	63516920	63516747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63516700_63516900
ES.9431.32	chr13	-	1790	1	Intergenic	novelGene_7750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63576709	63574919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63574900_63576700
ES.9431.4	chr13	-	2936	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_14	31.7239367554739	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGACCTTCCTACTC	NA	False	NA	-6	True	AATAAA	-18	NA	63579557	63459567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579242
ES.9431.5	chr13	-	2916	15	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	-11	0	intron_retention	FALSE	canonical	2	5	junction_14	30.5478046240141	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGACCTTCCTACTC	NA	False	NA	-6	True	AATAAA	-18	NA	63579519	63459567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
ES.9431.6	chr13	-	3976	13	NIC	ENSMUSG00000021461.18	novel	3111	15	NA	NA	-4	0	intron_retention	TRUE	canonical	3	4	junction_7	34.1348429028171	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGACCTTCCTACTC	NA	False	NA	-6	True	AATAAA	-18	NA	63579563	63459567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63479708_63488132_63488290_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.7	chr13	-	2918	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-22	215	-1	0	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGACCTTCCTACTC	NA	False	NA	-6	True	AATAAA	-18	NA	63579560	63459567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ES.9431.8	chr13	-	2680	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	-11	-381	-11	0	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCAGACCTTCCTACTC	NA	False	NA	-6	True	AATAAA	-18	NA	63579519	63459567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
ES.9431.9	chr13	-	3636	11	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	2	0	intron_retention	FALSE	canonical	1	2	junction_10	46.2995680325422	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCAGACCTTCCTACT	NA	False	NA	-7	True	AATAAA	-17	NA	63579506	63459568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63479708_63488132_63488290_63508009_63508075_63509392_63509507_63545896_63545992_63579263
ES.9432.1	chr13	-	177	1	Intergenic	novelGene_7751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATGACTGAGCC	NA	False	NA	NA	False	NA	NA	NA	63605474	63605297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63605300_63605500
ES.9433.1	chr13	-	177	1	Intergenic	novelGene_7752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGCTAGGT	NA	False	NA	NA	False	NA	NA	NA	63622575	63622398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63622400_63622600
ES.9434.1	chr13	+	4142	2	Antisense	novelGene_ENSMUSG00000021466.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCCATTG	NA	False	NA	NA	False	TATAAA	-36	NA	63668554	63673427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_63668939_63669669
ES.9435.1	chr13	-	177	2	Intergenic	novelGene_7753	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	63725775	63649656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63649737_63725678
ES.9435.10	chr13	-	7017	24	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-10	0	intron_retention	FALSE	canonical	1	1	junction_23	22.8743588958473	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63713098	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713013
ES.9435.12	chr13	-	4653	10	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	11639	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	31.7773892750144	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63675853	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63675773
ES.9435.14	chr13	-	7223	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	174	0	intron_retention	FALSE	canonical	0	0	junction_23	23.0319905738097	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712914	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712623
ES.9435.15	chr13	-	6719	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	716	0	intron_retention	FALSE	non_canonical	0	0	junction_1	23.6853188478115	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63710913	63656142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658540_63658629_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.16	chr13	-	6748	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	745	0	intron_retention	FALSE	canonical	0	0	junction_21	23.9425966403876	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63710884	63656142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695841_63696000_63710842
ES.9435.17	chr13	-	5258	12	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	29.0519625658168	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63713662	63656142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681315_63713523
ES.9435.18	chr13	-	7574	24	NIC	ENSMUSG00000021466.13	novel	7657	24	NA	NA	-184	0	intron_retention	FALSE	canonical	1	1	junction_11	30.3909000408511	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTGTTTCTAGAATG	NA	False	NA	-1	True	AATAAA	-22	NA	63713272	63656142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63685295_63685423_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.2	chr13	-	6838	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	690	2	intron_retention	TRUE	canonical	3	40	junction_22	16.0224532536208	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTCTAGAATGTTT	NA	False	NA	2	True	AATAAA	-25	NA	63710939	63656139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.20	chr13	-	7601	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-308	0	intron_retention	FALSE	non_canonical	0	0	junction_8	25.978179006602	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGTTTCTAGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	63713857	63656143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674971_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.21	chr13	-	7706	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-526	0	intron_retention	FALSE	canonical	0	0	junction_1	26.0310996204159	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGTTTCTAGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	63714075	63656143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659469_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.22	chr13	-	3594	3	NNC	ENSMUSG00000021466.13	novel	10383	22	NA	NA	-476	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.5	234	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTTGTTTCTAGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	63660319	63656143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63660052
ES.9435.23	chr13	-	6361	20	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	47	-1	intron_retention	FALSE	canonical	0	0	junction_16	23.738067420819	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTGTTTCTAGAA	8865	False	NA	-3	True	AATAAA	-20	NA	63693083	63656144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63690897_63691020_63691303_63691503_63692849_63692942_63693050
ES.9435.24	chr13	-	6926	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	687	-1	intron_retention	FALSE	canonical	0	0	junction_23	27.7688269552855	240	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTGTTTCTAGAA	NA	False	NA	-3	True	AATAAA	-20	NA	63710942	63656144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63699496_63699587_63710842
ES.9435.25	chr13	-	6995	23	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	110	-1	intron_retention	FALSE	canonical	0	0	junction_22	22.3020215516275	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCTTGTTTCTAGAA	NA	False	NA	-3	True	AATAAA	-20	NA	63721164	63656144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63720905
ES.9435.26	chr13	-	5564	14	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-182	-2	intron_retention	FALSE	non_canonical	0	0	junction_12	27.0998591668648	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGCTTGTTTCTAGA	NA	False	NA	-4	True	AATAAA	-19	NA	63687674	63656145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682213_63687046_63687173_63687627
ES.9435.27	chr13	-	6618	19	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	188	2	intron_retention	FALSE	non_canonical	0	0	junction_4	29.8016073806286	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGCTTGTTTCTA	NA	False	NA	-6	True	AATAAA	-17	NA	63712900	63656147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662140_63680382_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712271
ES.9435.28	chr13	-	6391	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	718	-409	intron_retention	FALSE	canonical	3	40	junction_22	16.0224532536208	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGGTGGAAATGAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	63710911	63656558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.29	chr13	-	4397	7	ISM	ENSMUSG00000021466.13	ENSMUST00000021921.11	7725	23	40635	424	-13071	-416	3prime_fragment	FALSE	canonical	3	79	junction_2	10.5672449894316	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCCAATTTGGGTGGAA	NA	False	NA	NA	False	AATAAA	-18	NA	63672914	63656565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758
ES.9435.3	chr13	-	7875	24	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-569	0	intron_retention	FALSE	canonical	3	23	junction_23	19.6234881059468	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63714118	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.30	chr13	-	6695	23	ISM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	528	421	-192	-421	3prime_fragment	FALSE	canonical	3	49	junction_22	14.8897463193483	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGTCTGCCAATTTGGG	NA	False	NA	NA	False	AATAAA	-13	NA	63711821	63656570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436
ES.9435.33	chr13	-	4589	23	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	692	431	intron_retention	FALSE	canonical	3	40	junction_22	16.0224532536208	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCTTCTCTAGGGGTAG	NA	False	NA	NA	False	AAGAAA	-14	NA	63710937	63658386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.34	chr13	-	4654	24	NIC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	-148	337	intron_retention	FALSE	canonical	3	23	junction_23	19.6234881059468	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTAGGATGAATTG	NA	False	NA	NA	False	TTTAAA	-25	NA	63713236	63658480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.35	chr13	-	4100	1	NIC	ENSMUSG00000021466.13	novel	7725	23	NA	NA	-8998	-5924	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAAAGCAGGAAAGTGT	NA	False	NA	NA	False	NA	NA	NA	63668841	63664741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_63664700_63668800
ES.9435.36	chr13	-	533	4	NNC	ENSMUSG00000021466.13	novel	809	7	NA	NA	716	-67	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	29.7993288515027	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCATTTTTTTGAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	63710913	63692739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.37	chr13	-	1292	5	ISM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	-559	36590	180	-67	5prime_fragment	FALSE	canonical	2	4	junction_4	41.4811704270745	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCATTTTTTTGAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	63712908	63692739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712271
ES.9435.38	chr13	-	1558	5	ISM	ENSMUSG00000021466.13	ENSMUST00000021921.11	7725	23	-529	36598	-529	-67	5prime_fragment	FALSE	canonical	3	23	junction_4	34.8030171105897	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCATTTTTTTGAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	63714078	63692739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ES.9435.39	chr13	-	1408	1	Genic_Genomic	ENSMUSG00000021466.13	novel	NA	NA	NA	NA	-569	-20038	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCAGCCGGTTCTGCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	63714118	63712710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_63712700_63714100
ES.9435.4	chr13	-	7567	23	NNC	ENSMUSG00000021466.13	novel	7725	23	NA	NA	150	0	intron_retention	FALSE	canonical	1	2	junction_22	23.1409622148995	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712938	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712722
ES.9435.5	chr13	-	7569	24	FSM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	-559	-8	180	0	multi-exon	FALSE	canonical	2	4	junction_23	22.4059470906355	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712908	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712271
ES.9435.6	chr13	-	7291	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	180	0	intron_retention	FALSE	canonical	1	2	junction_23	22.7174641147159	241	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712908	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712549
ES.9435.7	chr13	-	7139	24	NNC	ENSMUSG00000021466.13	novel	7002	24	NA	NA	153	0	intron_retention	FALSE	canonical	0	0	junction_23	23.0319905738097	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63712935	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712728
ES.9435.8	chr13	-	7235	22	NNC	ENSMUSG00000021466.13	novel	7725	23	NA	NA	710	0	intron_retention	FALSE	canonical	3	40	junction_21	16.3463088817922	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63710919	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63710842
ES.9435.9	chr13	-	8436	23	ISM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	-784	-8	-45	0	intron_retention	FALSE	canonical	3	49	junction_22	14.8897463193483	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63713133	63656141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436
ES.9436.1	chr13	+	168	1	Intergenic	novelGene_7754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTAAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	63763055	63763223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_63763100_63763200
ES.9437.1	chr13	-	176	1	Intergenic	novelGene_7755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCACCTCTCATT	5655	False	NA	NA	False	NA	NA	NA	63809485	63809309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63809300_63809500
ES.9438.1	chr13	+	4531	18	NIC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	22	3	combination_of_known_junctions	TRUE	canonical	1	3	junction_1	27.4184541193988	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTAGCATGTTATCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	63963075	64047446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.10	chr13	+	4217	9	ISM	ENSMUSG00000021470.20	ENSMUST00000021925.14	1828	11	-102	6937	11	-2421	5prime_fragment	FALSE	canonical	3	98	junction_3	9.73957776292176	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGCACTTGGAGAACTC	NA	False	NA	NA	False	NA	NA	NA	63963127	63999203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554
ES.9438.11	chr13	+	5496	18	NIC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	13	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	29.6210203114386	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCTTTCATCGAATT	NA	False	NA	5	True	AATAAA	-16	NA	63963129	64048112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.12	chr13	+	5117	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-159	-344	13	218	multi-exon	FALSE	canonical	3	68	junction_14	17.5231768921923	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCTCCTGTGTGAGTC	NA	False	NA	NA	False	AATATA	-18	NA	63963129	64047661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.13	chr13	+	5402	18	NIC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	-13	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	28.4705882352941	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTTTCATCGAATTT	NA	False	NA	6	True	AATAAA	-17	NA	63963134	64048113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.14	chr13	+	5601	19	NNC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	28.5121265082893	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63963135	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996519_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.15	chr13	+	1479	10	NNC	ENSMUSG00000021470.20	novel	1592	10	NA	NA	-12	-35	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.3630203726512	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAATAAATAAAACAT	NA	False	NA	-27	True	NA	NA	NA	63963135	64001589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63972618_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
ES.9438.16	chr13	+	5846	19	FSM	ENSMUSG00000021470.20	ENSMUST00000095724.11	5879	19	30	3	-2	-3	multi-exon	FALSE	canonical	2	3	junction_1	27.8532308563262	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTTTCATCGAATTT	NA	False	NA	6	True	AATAAA	-17	NA	63963145	64048113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63963625_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.17	chr13	+	4807	16	NNC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.5642936665541	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63963146	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63982409_63982604_63989775_63989984_63992359_63992501_63995154_63995269_63996595_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.18	chr13	+	3455	16	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	0	446	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	30.032574907183	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTTCTCTAAATAAC	NA	False	NA	NA	False	AATAAA	-8	NA	63963147	64020757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013780_64013872_64016839_64016993_64018502_64018584_64019609
ES.9438.2	chr13	+	5590	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-171	-805	1	6	multi-exon	FALSE	canonical	3	68	junction_14	17.5231768921923	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCGAATTTAATATATAT	NA	False	NA	15	True	AATAAA	-26	NA	63963117	64048122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.20	chr13	+	4915	18	NIC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	1	217	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	27.5926874621535	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCCTCCTGTGTGAGT	NA	False	NA	NA	False	AATATA	-17	NA	63963148	64047660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64046347
ES.9438.21	chr13	+	1662	11	NNC	ENSMUSG00000021470.20	novel	2743	14	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33.7899393311086	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTGTTTTCTAAACT	NA	False	NA	7	True	AATAAA	-23	NA	63963149	64001623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967612_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
ES.9438.22	chr13	+	5290	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27.5490583738165	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCTTTCATCGAATT	NA	False	NA	5	True	AATAAA	-16	NA	63963149	64048112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967612_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.23	chr13	+	4882	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	-139	-129	2	3	multi-exon	FALSE	canonical	3	68	junction_14	17.5231768921923	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTAGCATGTTATCATG	NA	False	NA	NA	False	ATTAAA	-24	NA	63963149	64047446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.24	chr13	+	5443	19	NNC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	25.9118281776137	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63963149	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967761_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.25	chr13	+	1948	11	NNC	ENSMUSG00000021470.20	novel	2743	14	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	34.9057301886094	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATCTGGTTGTTTTCT	NA	False	NA	2	True	AATAAA	-18	NA	63963151	64001618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996519_63996675_64000764_64000837_64001441
ES.9438.26	chr13	+	4203	9	NNC	ENSMUSG00000021470.20	novel	1828	11	NA	NA	5	-2445	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	38.8257324464072	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63963152	63999179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996519
ES.9438.27	chr13	+	2255	12	NNC	ENSMUSG00000021470.20	novel	2743	14	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	47.8167991504213	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTGTTTTCTAAACT	NA	False	NA	7	True	AATAAA	-23	NA	63963152	64001623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63988706_63988854_63989237_63989591_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
ES.9438.28	chr13	+	4226	4	ISM	ENSMUSG00000021470.20	ENSMUST00000144763.2	1820	5	5	-780	5	780	intron_retention	FALSE	canonical	3	98	junction_3	11.8977121983832	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAGACAATGCATGGTA	NA	False	NA	NA	False	AATAAA	-9	NA	63963152	63985911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409
ES.9438.29	chr13	+	5124	18	NIC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	27.4184541193988	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63963152	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.3	chr13	+	1952	11	ISM	ENSMUSG00000021470.20	ENSMUST00000067821.13	2743	14	1	15846	1	-1	5prime_fragment	FALSE	canonical	3	89	junction_9	12.0979337078693	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTTGTTTTCTAAACT	NA	False	NA	7	True	AATAAA	-23	NA	63963117	64001623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
ES.9438.30	chr13	+	5541	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_12	27.9583022851293	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTCATCGAATTTAATA	NA	False	NA	10	True	AATAAA	-21	NA	63963152	64048117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013780_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.31	chr13	+	2022	12	NIC	ENSMUSG00000021470.20	novel	2743	14	NA	NA	-13	-35	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	42.6240532722473	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAATAAATAAAACAT	NA	False	NA	-27	True	NA	NA	NA	63963160	64001589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63988706_63988854_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441
ES.9438.32	chr13	+	3789	18	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	-13	24075	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	29.0795353670348	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGCTTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	63963160	64072191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64071992
ES.9438.33	chr13	+	5709	19	NNC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	32.546500447176	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTTTCATCGAATTT	NA	False	NA	6	True	AATAAA	-17	NA	63963173	64048113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963625_63967444_63967761_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.34	chr13	+	5669	20	NIC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	3	-3	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	33.9168773715553	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTTTCATCGAATTT	NA	False	NA	6	True	AATAAA	-17	NA	63963176	64048113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63988706_63988854_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.35	chr13	+	4674	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	27	215	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	37.3538716653985	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTCCCTCCTGTGTGA	NA	False	NA	NA	False	AATATA	-15	NA	63963200	64047658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63972622_63972743_63982409_63982604_63989237_63989400_63989534_63989591_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.36	chr13	+	3794	2	ISM	ENSMUSG00000021470.20	ENSMUST00000144763.2	1820	5	53	14024	27	831	5prime_fragment	FALSE	canonical	3	115	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCTCAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	63963200	63971107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63963332_63967444
ES.9438.38	chr13	+	4827	16	ISM	ENSMUSG00000021470.20	ENSMUST00000095724.11	5879	19	19292	0	-5990	0	3prime_fragment	FALSE	canonical	3	68	junction_11	17.2064587356673	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63982407	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.39	chr13	+	7513	14	NIC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	-1666	0	intron_retention	FALSE	canonical	3	68	junction_9	16.3066037372528	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	63986731	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.4	chr13	+	5609	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	28.2617832958525	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTCTTTCATCGAAT	NA	False	NA	4	True	AATAAA	-15	NA	63963117	64048111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042421_64042634_64046347
ES.9438.40	chr13	+	5466	4	NNC	ENSMUSG00000021470.20	novel	1592	10	NA	NA	-965	-2445	intron_retention	FALSE	canonical	1	1	junction_3	54.9201440477192	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63987432	63999179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63989984_63992359_63992501_63995154_63995269_63996519
ES.9438.41	chr13	+	3225	2	NNC	ENSMUSG00000021470.20	novel	1592	10	NA	NA	6265	-2444	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63994662	63999180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63995269_63996561
ES.9438.42	chr13	+	4799	9	NIC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	12059	0	intron_retention	FALSE	canonical	3	68	junction_4	15.0145762510968	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	64000456	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.43	chr13	+	4108	9	NNC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	12699	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.1065688181342	166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTCTTTCATCGAAT	NA	False	NA	4	True	AATAAA	-15	NA	64001096	64048111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_64001588_64006044_64006141_64013780_64013872_64016839_64016956_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.44	chr13	+	3532	8	NIC	ENSMUSG00000021470.20	novel	5879	19	NA	NA	13144	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_7	27.3466037140607	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTCATCGAATTTAAT	NA	False	NA	9	True	AATAAA	-20	NA	64001541	64048116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64046347
ES.9438.5	chr13	+	5126	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	3	217	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	28.2617832958525	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCCTCCTGTGTGAGT	NA	False	NA	NA	False	AATATA	-17	NA	63963119	64047660	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992493_63995146_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.6	chr13	+	3544	6	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.3709580249272	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCTCTTTCATCGAAT	NA	False	NA	4	True	AATAAA	-15	NA	63963119	64048111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967844_64019909_64020742_64025192_64025348_64042451_64042634_64046347
ES.9438.8	chr13	+	2282	5	FSM	ENSMUSG00000021470.20	ENSMUST00000144763.2	1820	5	-23	-439	8	439	multi-exon	FALSE	canonical	0	0	junction_4	50.1447903575237	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTTAATTGTTTACC	NA	False	NA	NA	False	AATAAA	-12	NA	63963124	63985570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63984234
ES.9438.9	chr13	+	5554	19	NNC	ENSMUSG00000021470.20	novel	4614	19	NA	NA	10	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	28.8215561475336	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCGAATTTAATATAT	NA	False	NA	13	True	AATAAA	-24	NA	63963126	64048120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020717_64025192_64025348_64042451_64042634_64046347
ES.9439.1	chr13	-	3831	1	Intergenic	novelGene_7756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAGCCAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	63980137	63976306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_63976300_63980100
ES.944.1	chr1	-	177	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAAATTCCC	NA	False	NA	NA	False	NA	NA	NA	87231095	87230918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87230900_87231100
ES.9440.1	chr13	-	1463	2	Intergenic	novelGene_7757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACACTGTATGCTGAATT	8292	False	NA	NA	False	ATTAAA	-21	NA	64076532	64074724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64075520_64075864
ES.9441.1	chr13	-	1845	3	Intergenic	novelGene_7758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCCTCATTTGGAACAT	NA	False	NA	NA	False	NA	NA	NA	64116541	64077848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64079440_64079875_64079955_64116366
ES.9441.2	chr13	-	1994	4	Intergenic	novelGene_7759	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_3	3.09120616516523	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTCCTCATTTGGAAC	NA	False	NA	NA	False	NA	NA	NA	64116539	64077850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64079440_64079875_64079955_64087034_64087188_64116366
ES.9441.3	chr13	-	5275	1	FSM	ENSMUSG00000113340.2	ENSMUST00000220900.2	641	1	-4572	-62	-4572	62	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAACCAAAACAAAACAAA	8279	False	NA	NA	False	AATAAA	-45	NA	64098907	64093632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64093600_64098900
ES.9441.4	chr13	-	2319	3	Intergenic	novelGene_7760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAGGATGTTTGGATT	NA	False	NA	NA	False	AATAAA	-18	NA	64116541	64099445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64101355_64107440_64107676_64116366
ES.9441.5	chr13	-	843	2	Intergenic	novelGene_7761	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64116542	64107008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64107676_64116366
ES.9441.6	chr13	-	956	3	Intergenic	novelGene_7762	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64116543	64107008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64107676_64108537_64108650_64116366
ES.9442.1	chr13	+	183	1	Intergenic	novelGene_7763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACACACTTGTATGAGA	NA	False	NA	NA	False	NA	NA	NA	64123104	64123287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64123100_64123300
ES.9443.1	chr13	+	175	1	Intergenic	novelGene_7764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGAGTGGGGCCAGAG	1441	False	NA	NA	False	NA	NA	NA	64205447	64205622	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64205400_64205600
ES.9444.1	chr13	-	227	1	Intergenic	novelGene_7765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCATAATCCCATC	NA	False	NA	NA	False	AGTAAA	-26	NA	64234744	64234517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64234500_64234700
ES.9445.1	chr13	+	155	1	Antisense	novelGene_ENSMUSG00000033114.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGATGGAGTA	NA	False	NA	NA	False	NA	NA	NA	64244426	64244581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_64244400_64244600
ES.9446.1	chr13	-	2175	10	NIC	ENSMUSG00000033114.12	novel	983	11	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	45.0393517923665	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	-2	True	NA	NA	NA	64277144	64244122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64276999
ES.9446.10	chr13	-	1620	13	NNC	ENSMUSG00000033114.12	novel	1542	13	NA	NA	-4	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	56.9024506404504	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCACAGTGTGATATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	64277154	64244956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64260743_64260816_64268408_64268496_64270132_64270167_64272754_64272877_64272914_64272989_64274547_64274656_64276999
ES.9446.11	chr13	-	1383	11	NIC	ENSMUSG00000033114.12	novel	1542	13	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	52.7337652742529	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCACAGTGTGATATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	64277144	64244956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64274564_64274656_64276999
ES.9446.12	chr13	-	1254	9	NIC	ENSMUSG00000033114.12	novel	983	11	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCACAGTGTGATATTACA	NA	False	NA	NA	False	AATAAA	-17	NA	64277144	64244956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
ES.9446.13	chr13	-	1374	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	31.255239560752	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCACAGTGTGATATTAC	NA	False	NA	NA	False	AATAAA	-16	NA	64277144	64244957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
ES.9446.14	chr13	-	4105	8	NIC	ENSMUSG00000033114.12	novel	1474	9	NA	NA	2	0	intron_retention	FALSE	canonical	3	15	junction_5	34.672814734784	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTGATGAGATTTCCCA	NA	False	NA	NA	False	NA	NA	NA	64277123	64249091	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64268408_64268496_64270132_64270167_64276999
ES.9446.15	chr13	-	158	1	Intergenic	novelGene_7766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTATAT	NA	False	NA	NA	False	NA	NA	NA	64259786	64259628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64259600_64259800
ES.9446.16	chr13	-	177	1	Intergenic	novelGene_7767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTTTACCATGTTT	NA	False	NA	NA	False	NA	NA	NA	64261070	64260893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64260900_64261100
ES.9446.17	chr13	-	159	1	Intergenic	novelGene_7768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATAAATACATCT	9485	False	NA	NA	False	NA	NA	NA	64265551	64265392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64265400_64265600
ES.9446.2	chr13	-	2204	11	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	31.977492084277	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	-2	True	NA	NA	NA	64277139	64244122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ES.9446.3	chr13	-	2300	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	2	1	2	-1	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	-2	True	NA	NA	NA	64277167	64244122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ES.9446.4	chr13	-	2098	9	NIC	ENSMUSG00000033114.12	novel	983	11	NA	NA	-4	-1	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	-2	True	NA	NA	NA	64277154	64244122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
ES.9446.5	chr13	-	2121	10	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	36.5817197821839	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTATGGTTTTTGGT	NA	False	NA	-2	True	NA	NA	NA	64277143	64244122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64270132_64270167_64276999
ES.9446.6	chr13	-	2229	12	NNC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	49.3843084122414	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGTTATGGTTTTTG	NA	False	NA	-4	True	NA	NA	NA	64277148	64244124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64245499_64246128_64246212_64247083_64247163_64248786_64248824_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64270132_64270167_64276999
ES.9446.8	chr13	-	1288	10	NIC	ENSMUSG00000033114.12	novel	2303	12	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	36.5817197821839	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACAGTGTGATATTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	64277143	64244955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64270132_64270167_64276999
ES.9446.9	chr13	-	1454	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	15	834	-4	-1	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACAGTGTGATATTACAG	NA	False	NA	NA	False	AATAAA	-18	NA	64277154	64244955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ES.9447.1	chr13	-	3767	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	-235	0	-235	0	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGGGTCATTCTTACA	5815	False	NA	NA	False	AATAAA	-26	NA	64301251	64280831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ES.9447.10	chr13	-	6793	1	Genic_Genomic	ENSMUSG00000044934.14	novel	NA	NA	NA	NA	-16	-5958	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATTTTGAATTACCT	6034	False	NA	NA	False	AATAAA	-32	NA	64301032	64294239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_64294200_64301000
ES.9447.2	chr13	-	5610	1	NIC	ENSMUSG00000044934.14	novel	3532	5	NA	NA	11584	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACATGGGTCATTCTT	2713	False	NA	NA	False	AATAAA	-23	NA	64286444	64280834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64280800_64286400
ES.9447.3	chr13	-	4175	5	NNC	ENSMUSG00000044934.14	novel	3532	5	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	23.3063832457977	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTACATGGGTCATTC	6051	False	NA	NA	False	AATAAA	-21	NA	64301015	64280836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64283351_64290021_64290451_64291609_64292089_64293343_64293495_64300413
ES.9447.5	chr13	-	4221	5	NNC	ENSMUSG00000044934.14	novel	3532	5	NA	NA	-11	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.3600093632938	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCATAAAGTACATGGGT	6039	False	NA	NA	False	AATAAA	-16	NA	64301027	64280841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64283351_64290021_64290161_64291968_64292777_64293343_64293495_64300413
ES.9447.6	chr13	-	2756	4	ISM	ENSMUSG00000044934.14	ENSMUST00000134136.2	562	5	4532	-2337	4532	-175	3prime_fragment	FALSE	canonical	3	44	junction_2	6.12825877028341	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTTATGACTGCTT	NA	False	NA	NA	False	AATACA	-17	NA	64293496	64281006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343
ES.9447.7	chr13	-	2682	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	-101	951	-101	-951	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATGGGCTCCTCAGTG	5949	False	NA	NA	False	NA	NA	NA	64301117	64281782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ES.9447.8	chr13	-	2395	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	1	1136	1	-1136	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGATGAAGTTATTGAG	6051	False	NA	NA	False	NA	NA	NA	64301015	64281967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ES.9447.9	chr13	-	2175	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	-16	1373	-16	1012	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTTCTGCTTGTTTAGC	6034	False	NA	NA	False	AGTAAA	-12	NA	64301032	64282204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ES.9448.1	chr13	+	4324	8	NNC	ENSMUSG00000021476.10	novel	2564	8	NA	NA	19	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	55.9832336416859	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTATGACTGCCTTA	NA	False	NA	NA	False	ATTAAA	-10	NA	64309656	64334342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64331836_64332386_64332573_64333086
ES.9448.2	chr13	+	4875	7	FSM	ENSMUSG00000021476.10	ENSMUST00000221904.2	4903	7	27	1	-18	-1	multi-exon	FALSE	canonical	3	144	junction_5	8.22090830342568	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGCCTTATTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	64309664	64334350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64332573_64333086
ES.9448.3	chr13	+	1477	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	-18	1105	-18	-412	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATTGCACTTTTTTGC	NA	False	NA	12	True	AATAGA	-24	NA	64309664	64333246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
ES.9448.4	chr13	+	2570	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	-7	1	-7	-1	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGCCTTATTCATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	64309675	64334350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
ES.9448.5	chr13	+	1299	2	FSM	ENSMUSG00000021476.10	ENSMUST00000221264.2	471	2	-369	-459	8	459	multi-exon	FALSE	canonical	3	21	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGGGTTTTATTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	64309690	64311891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64310149_64311050
ES.9448.6	chr13	+	3734	7	FSM	ENSMUSG00000021476.10	ENSMUST00000221904.2	4903	7	55	1114	10	-421	multi-exon	FALSE	canonical	3	144	junction_5	8.22090830342568	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTGTGAAGTCATTGCA	NA	False	NA	3	True	AATAGA	-15	NA	64309692	64333237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64332573_64333086
ES.9448.7	chr13	+	3745	7	NNC	ENSMUSG00000021476.10	novel	4903	7	NA	NA	11	-410	intron_retention	FALSE	canonical	0	0	junction_2	73.2637927856136	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGCACTTTTTTGCTC	NA	False	NA	14	True	AATAGA	-26	NA	64309693	64333248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_64310149_64317827_64317991_64321862_64322036_64322603_64322660_64323818_64323903_64329920_64332573_64333086
ES.9448.8	chr13	+	4887	8	NNC	ENSMUSG00000021476.10	novel	2564	8	NA	NA	32	-7	intron_retention	FALSE	canonical	0	0	junction_3	70.6942251487896	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTATGACTGCCTTATT	NA	False	NA	NA	False	ATTAAA	-12	NA	64309714	64334344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_64310149_64317827_64317991_64321876_64322036_64322429_64322498_64322603_64322673_64323818_64323903_64329920_64332573_64333086
ES.9449.1	chr13	+	1718	1	Intergenic	novelGene_7769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64353837	64355555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64353800_64355600
ES.945.1	chr1	+	152	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	87240081	87240233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87240100_87240200
ES.9450.1	chr13	+	179	1	Intergenic	novelGene_7771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAACAGGATTTCT	861	False	NA	NA	False	NA	NA	NA	64371314	64371493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64371300_64371500
ES.9451.1	chr13	+	181	1	Intergenic	novelGene_7773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGCAGATTCTCA	NA	False	NA	NA	False	NA	NA	NA	64387571	64387752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64387600_64387800
ES.9452.1	chr13	+	1704	4	NNC	ENSMUSG00000097101.4	novel	1024	3	NA	NA	1	953	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCATCTGCTGTGAATT	NA	False	NA	NA	False	NA	NA	NA	64396514	64416915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_64397018_64414255_64414364_64415782_64416222_64416261
ES.9452.2	chr13	+	1320	3	NIC	ENSMUSG00000097101.4	novel	1805	3	NA	NA	9	-383	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCTGGTACCGGGTCTT	NA	False	NA	NA	False	AATACA	-12	NA	64396550	64415579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_64397018_64414255_64414364_64414834
ES.9453.1	chr13	+	214	1	Genic_Genomic	ENSMUSG00000113816.2	novel	NA	NA	NA	NA	-185	-6934	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAACTTTCACCACAGAC	5934	False	NA	NA	False	NA	NA	NA	64438705	64438919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_64438700_64438900
ES.9454.1	chr13	+	177	1	Intergenic	novelGene_7774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAACAAA	8605	False	NA	NA	False	NA	NA	NA	64441376	64441553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64441400_64441600
ES.9455.1	chr13	+	169	1	Intergenic	novelGene_7775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTACTTTATCA	NA	False	NA	NA	False	NA	NA	NA	64451926	64452095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64451900_64452100
ES.9456.1	chr13	+	174	1	Intergenic	novelGene_7776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCTTTGTAAGCACATA	NA	False	NA	NA	False	NA	NA	NA	64458893	64459067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64458900_64459100
ES.9457.1	chr13	-	4495	3	NNC	ENSMUSG00000033102.16	novel	628	5	NA	NA	316	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	8	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGTTGTATTCACT	NA	False	NA	NA	False	ATTAAA	-16	NA	64345422	64340357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64344793_64344860_64345125
ES.9457.10	chr13	-	7124	19	Fusion	ENSMUSG00000033102.16_ENSMUSG00000021482.11	novel	3075	15	NA	NA	0	0	multi-exon	TRUE	canonical	3	4	junction_15	50.145344305883	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64460357	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.11	chr13	-	5524	10	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	23.7195548851705	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9644	False	NA	NA	False	ATTAAA	-15	NA	64422834	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64422404
ES.9457.12	chr13	-	5940	15	NNC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	26.2613435159991	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9690	False	NA	NA	False	ATTAAA	-15	NA	64422788	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218_64396314_64422404
ES.9457.13	chr13	-	5605	11	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	22.3427840700303	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9640	False	NA	NA	False	ATTAAA	-15	NA	64422838	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
ES.9457.14	chr13	-	5860	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-1	0	-1	0	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9675	False	NA	NA	False	ATTAAA	-15	NA	64422803	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.15	chr13	-	5857	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9648	False	NA	NA	False	ATTAAA	-15	NA	64422830	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.16	chr13	-	5927	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-33	-1	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTTGTTGTATTCA	9643	False	NA	NA	False	ATTAAA	-14	NA	64422835	64340359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.17	chr13	-	3321	15	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	113	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.2471196372491	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGTTTGTTGTATTC	NA	False	NA	NA	False	ATTAAA	-13	NA	64396343	64340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64341765_64343997_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.18	chr13	-	5594	11	NNC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.5945941009503	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGTTTGTTGTATTC	9674	False	NA	NA	False	ATTAAA	-13	NA	64422804	64340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344485_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
ES.9457.19	chr13	-	5849	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-45	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.475478405714	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGTTTGTTGTATTC	9740	False	NA	NA	False	ATTAAA	-13	NA	64422738	64340360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64353311_64353398_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.2	chr13	-	5558	15	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	78	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	26.0197138762916	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGTTGTATTCACT	9863	False	NA	NA	False	ATTAAA	-16	NA	64422615	64340357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363394_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.21	chr13	-	4351	18	Fusion	ENSMUSG00000033102.16_ENSMUSG00000021482.11	novel	3075	15	NA	NA	1	0	multi-exon	FALSE	canonical	3	4	junction_14	47.242875371387	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64460523	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.22	chr13	-	2894	12	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	29.6870731809248	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9674	False	NA	NA	False	NA	NA	NA	64422804	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64391447_64391541_64394338_64394415_64395041_64395133_64396218_64396281_64422404
ES.9457.23	chr13	-	3219	15	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	27.1279094179363	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9676	False	NA	NA	False	NA	NA	NA	64422802	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64372808_64372991_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.24	chr13	-	2790	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	17.1357268913424	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64396369	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.26	chr13	-	2809	11	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	26.2785083290509	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9674	False	NA	NA	False	NA	NA	NA	64422804	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
ES.9457.27	chr13	-	2819	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	88	-21	88	0	multi-exon	FALSE	canonical	3	22	junction_2	22.3145877936915	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64396368	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.28	chr13	-	4490	18	Fusion	ENSMUSG00000033102.16_ENSMUSG00000021482.11	novel	3075	15	NA	NA	1	0	multi-exon	FALSE	canonical	0	0	junction_13	52.0427027216534	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64460523	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422295_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.29	chr13	-	2931	12	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	27.4473199402205	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9669	False	NA	NA	False	NA	NA	NA	64422809	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
ES.9457.3	chr13	-	5584	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	86	1	combination_of_known_junctions	FALSE	canonical	3	23	junction_13	17.1357268913424	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGTTGTATTCACT	NA	False	NA	NA	False	ATTAAA	-16	NA	64396370	64340357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.30	chr13	-	2800	15	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	138	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.0684776448146	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64396318	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344485_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.31	chr13	-	3135	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9644	False	NA	NA	False	NA	NA	NA	64422834	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.32	chr13	-	4111	15	Fusion	ENSMUSG00000033102.16_ENSMUSG00000021482.11	novel	3075	15	NA	NA	-19	0	multi-exon	FALSE	canonical	1	1	junction_10	54.5542699277237	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64460543	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.33	chr13	-	3039	14	NNC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.9803396742074	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	9680	False	NA	NA	False	NA	NA	NA	64422798	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368428_64368502_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.34	chr13	-	4709	20	Fusion	ENSMUSG00000033102.16_ENSMUSG00000021482.11	novel	3075	15	NA	NA	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	51.7384751040672	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAGCCCATAATTAGAA	NA	False	NA	NA	False	NA	NA	NA	64460542	64343150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_64344490_64344793_64344860_64345125_64345399_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.35	chr13	-	3175	15	FSM	ENSMUSG00000033102.16	ENSMUST00000109770.2	3052	15	-121	-2	-12	0	multi-exon	FALSE	canonical	3	5	junction_2	23.4900109034649	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9664	False	NA	NA	False	NA	NA	NA	64422814	64343171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.36	chr13	-	3048	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-2	2813	-2	0	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9674	False	NA	NA	False	NA	NA	NA	64422804	64343171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.38	chr13	-	2920	12	NIC	ENSMUSG00000033102.16	novel	3052	15	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	28.9779055189374	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	9670	False	NA	NA	False	NA	NA	NA	64422808	64343173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.39	chr13	-	1576	2	NNC	ENSMUSG00000033102.16	novel	3052	15	NA	NA	353	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64345385	64343173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64345125
ES.9457.4	chr13	-	5635	12	NIC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	25.5002835829313	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9676	False	NA	NA	False	ATTAAA	-15	NA	64422802	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64422404
ES.9457.40	chr13	-	2495	12	NNC	ENSMUSG00000033102.16	novel	3052	15	NA	NA	2073	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	20.9765709525084	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64394383	64343173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64344490_64349145_64349263_64356920_64357014_64357733_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338
ES.9457.41	chr13	-	2857	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	143	-1	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	24.2273458247965	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64396313	64343174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.42	chr13	-	2906	15	FSM	ENSMUSG00000033102.16	ENSMUST00000109770.2	3052	15	-105	251	4	-251	multi-exon	FALSE	canonical	3	5	junction_2	23.4900109034649	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAAATTGTTAACCCTT	9680	False	NA	NA	False	AAAACA	-19	NA	64422798	64343424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.43	chr13	-	1821	5	ISM	ENSMUSG00000033102.16	ENSMUST00000223116.2	752	6	1667	-902	-357	-291	3prime_fragment	FALSE	canonical	3	48	junction_2	17.9913173503221	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAAGCAAAA	9809	False	NA	NA	False	NA	NA	NA	64358429	64343464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008
ES.9457.45	chr13	-	2151	11	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	-7	271	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	25.4723379374568	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTTGTATGTTGTT	9669	False	NA	NA	False	NA	NA	NA	64422809	64343836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.47	chr13	-	2408	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	-27	3478	-27	271	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTTGTATGTTGTT	9649	False	NA	NA	False	NA	NA	NA	64422829	64343836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.48	chr13	-	2393	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	23	270	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTGTTGTATGTTGT	9699	False	NA	NA	False	NA	NA	NA	64422779	64343837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ES.9457.49	chr13	-	235	1	Intergenic	novelGene_7770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAATAAAATAAAAAAGAA	4076	False	NA	NA	False	NA	NA	NA	64366277	64366042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64366000_64366300
ES.9457.5	chr13	-	5535	14	NIC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	26.5788989580548	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64396353	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64353311_64353398_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.50	chr13	-	173	1	Intergenic	novelGene_7772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	64374138	64373965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64374000_64374100
ES.9457.51	chr13	-	4564	1	Antisense	novelGene_ENSMUSG00000113603.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCATGCACAGCTTGT	2279	False	NA	NA	False	NA	NA	NA	64411115	64406551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_64406600_64411100
ES.9457.52	chr13	-	2466	1	NIC	ENSMUSG00000033102.16	novel	1953	15	NA	NA	14	-64360	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9690	False	NA	NA	False	NA	NA	NA	64422788	64420322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64420300_64422800
ES.9457.53	chr13	-	3005	5	FSM	ENSMUSG00000033102.16_ENSMUSG00000021482.11	ENSMUST00000221118.2	615	5	-5	-2385	-5	2093	multi-exon	FALSE	canonical	3	4	junction_1	73.4042743987024	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGCGTTTATAGTTTTAA	NA	False	NA	NA	False	TATAAA	-17	NA	64460412	64421000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.54	chr13	-	3846	2	NNC	ENSMUSG00000021482.11	novel	682	2	NA	NA	-1470	-599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCATAAAATTTCTGAT	3470	False	NA	NA	False	NA	NA	NA	64429008	64424040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64427513_64428634
ES.9457.55	chr13	-	4935	1	Genic_Genomic	ENSMUSG00000021482.11	novel	NA	NA	NA	NA	-1470	-632	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAAACC	3470	False	NA	NA	False	NA	NA	NA	64429008	64424073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_64424100_64429000
ES.9457.56	chr13	-	4657	1	Genic_Genomic	ENSMUSG00000021482.11	novel	NA	NA	NA	NA	-1470	-910	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACATACTAGACACACAC	3470	False	NA	NA	False	NA	NA	NA	64429008	64424351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_64424400_64429000
ES.9457.57	chr13	-	3061	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-50	0	-50	0	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGTTCTGGGTTC	NA	False	NA	0	True	ATTAAA	-17	NA	64460574	64437610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.58	chr13	-	2958	5	FSM	ENSMUSG00000021482.11	ENSMUST00000021938.11	791	5	-156	-2011	-20	2	multi-exon	FALSE	canonical	2	5	junction_3	76.095334942426	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTTTGTTTGGGTTA	NA	False	NA	-19	True	AATAAA	-29	NA	64460544	64437629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64460080_64460150_64460306
ES.9457.6	chr13	-	5561	15	NIC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	143	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	27.752550903163	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64396313	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64353311_64353398_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9457.61	chr13	-	1916	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	1	1094	1	936	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTCTCTCATAAGCTTG	NA	False	NA	NA	False	NA	NA	NA	64460523	64438704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.62	chr13	-	1761	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-13	1263	-13	767	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTCTGTATAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	64460537	64438873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.63	chr13	-	1730	6	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	-11	697	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	71.4030811660113	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGTGGTGAAAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	64460535	64438943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460039_64460150_64460306
ES.9457.64	chr13	-	172	1	ISM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	21233	1509	-11753	521	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAGAAAAAGTC	NA	False	NA	-2	True	NA	NA	NA	64439291	64439119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64439100_64439300
ES.9457.65	chr13	-	990	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	-14	2035	-14	-5	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAGAAGGGGGCGC	NA	False	NA	NA	False	AATAAA	-16	NA	64460538	64439645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.66	chr13	-	958	6	NNC	ENSMUSG00000021482.11	novel	3011	6	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	67.7229650857078	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAGAAGGGGGCGC	NA	False	NA	NA	False	AATAAA	-16	NA	64460518	64439645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64440043_64445068_64445189_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ES.9457.67	chr13	-	881	5	FSM	ENSMUSG00000021482.11	ENSMUST00000021938.11	791	5	-135	45	1	-45	multi-exon	FALSE	canonical	2	5	junction_3	76.095334942426	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGAGTATCCACTCA	NA	False	NA	NA	False	TATAAA	-35	NA	64460523	64439685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64460080_64460150_64460306
ES.9457.68	chr13	-	248	2	Antisense	novelGene_ENSMUSG00000113816.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	157	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCACTGGCTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	64448344	64444548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_64444775_64448322
ES.9457.7	chr13	-	5347	8	NIC	ENSMUSG00000033102.16	novel	5859	14	NA	NA	45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	31.0746303769043	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9721	False	NA	NA	False	ATTAAA	-15	NA	64422757	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64422404
ES.9457.8	chr13	-	5614	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	22.1833730712064	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	64396335	64340358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ES.9458.1	chr13	+	158	1	Intergenic	novelGene_7777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATATATTC	NA	False	NA	NA	False	NA	NA	NA	64469820	64469978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64469800_64470000
ES.9459.1	chr13	-	158	1	Intergenic	novelGene_7778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64471587	64471429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64471400_64471600
ES.946.10	chr1	+	4389	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	-16	-344	10	281	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTCTTGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	87254734	87377211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.11	chr1	+	4179	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	12	1533	12	55	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCAGGCTTTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	87254736	87376985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.12	chr1	+	5573	28	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	12	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	40.4740428935404	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254736	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.13	chr1	+	1952	3	ISM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	19	-492	-12	492	intron_retention	FALSE	canonical	3	190	junction_1	13.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCATGTTCTTTTTTGTT	NA	False	NA	NA	False	AGTAAA	-29	NA	87254738	87283936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87254815_87261991_87262057_87282125
ES.946.14	chr1	+	3082	5	NNC	ENSMUSG00000048000.16	novel	3015	4	NA	NA	-8	-88	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	87.4253252782053	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAATTGCTGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	87254742	87285418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87260242_87260389_87261991_87262057_87282125_87282209_87282702
ES.946.15	chr1	+	5582	28	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	-7	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	45.257774116386	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCTTGTACTCGCCTC	NA	False	NA	24	True	AATAAA	-34	NA	87254743	87378535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254830_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87371366_87371549_87374033_87374182_87376799
ES.946.17	chr1	+	4398	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	21	1305	-5	283	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTTTCTTGTTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	87254745	87377213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.19	chr1	+	5663	29	NNC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	49.8462303857922	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254750	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344711_87346813_87346902_87348006_87348122_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.2	chr1	+	5731	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	-33	-1669	-2	18	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTACTCGCCTCT	NA	False	NA	25	True	AATAAA	-35	NA	87254717	87378536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.20	chr1	+	5545	27	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	39.1092386064814	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254750	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.21	chr1	+	2951	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-1	65	0	-65	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTTCAGTGTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	87254750	87285441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ES.946.24	chr1	+	5699	30	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	46.0714174445585	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254750	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87370739_87370765_87371366_87371549_87374033_87374182_87376799
ES.946.25	chr1	+	7452	28	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_17	40.2602643916913	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254750	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349241_87349314_87350902_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.26	chr1	+	5685	29	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	44.1100201490661	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254751	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254830_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335259_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.27	chr1	+	963	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	32	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATAGTTTCATTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	87254751	87283444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
ES.946.28	chr1	+	4572	30	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	285	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	43.5616746761936	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTTGTTCTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	87254751	87377215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702_87282881_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.3	chr1	+	1476	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	-33	1572	-1	490	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGCATGTTCTTTTTTG	NA	False	NA	NA	False	AGTAAA	-27	NA	87254718	87283934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ES.946.30	chr1	+	5523	27	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	48.6820988204302	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254751	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87331388_87331569_87334723_87334924_87335014_87335178_87335259_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.34	chr1	+	5673	28	NNC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.6204284121866	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAATGTGTTGTGGTCTC	NA	False	NA	1	True	AATAAA	-11	NA	87254751	87378512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262140_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.35	chr1	+	5694	29	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	40.0650618828109	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254751	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254830_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.36	chr1	+	4517	30	NNC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	0	280	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	46.6345113157619	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCACTTTTCTTGTTCTG	NA	False	NA	NA	False	NA	NA	NA	87254751	87377210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87260242_87260389_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.38	chr1	+	5567	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	32	125	2	-125	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGCTTTGTAAATT	NA	False	NA	NA	False	ATTAAA	-13	NA	87254756	87378393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.39	chr1	+	5550	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	7	-1528	3	-123	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGCTTTGTAAATTCA	NA	False	NA	NA	False	ATTAAA	-15	NA	87254757	87378395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.4	chr1	+	5747	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	-5	-18	0	18	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTTGTACTCGCCTCT	NA	False	NA	25	True	AATAAA	-35	NA	87254719	87378536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.40	chr1	+	5288	27	NIC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	3	-24	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	42.4121961079384	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254757	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87371366_87371549_87374033_87374182_87376799
ES.946.41	chr1	+	5512	28	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	3	-24	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	39.7424147933625	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254757	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87371366_87371549_87374033_87374182_87376799
ES.946.42	chr1	+	6835	27	NNC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	5	-24	intron_retention	FALSE	canonical	0	0	junction_21	42.45875130206	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254759	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361405_87361639_87364490_87364614_87368109_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.43	chr1	+	4947	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	9	-927	5	-724	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAATTTCATCTGTTC	NA	False	NA	NA	False	GATAAA	-19	NA	87254759	87377794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.44	chr1	+	2552	18	ISM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	9	27256	5	23	5prime_fragment	FALSE	canonical	3	42	junction_9	34.2772130669945	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATGTTTGAATTAT	NA	False	NA	NA	False	NA	NA	NA	87254759	87349611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212
ES.946.45	chr1	+	5624	28	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	34.5587509935356	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254759	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.46	chr1	+	2918	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	47	-1970	-1	-92	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTGAATTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	87254766	87285414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
ES.946.47	chr1	+	5635	28	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	-24	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	50.7973730999409	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254767	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87262511_87262643_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.48	chr1	+	1593	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	59	-657	-9	657	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGCCATTGGTTCA	NA	False	NA	NA	False	ATTAAA	-13	NA	87254778	87284101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
ES.946.49	chr1	+	5812	30	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	44.639232942749	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254782	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87260242_87260389_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.5	chr1	+	5235	24	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	42.7475996739325	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254719	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.50	chr1	+	997	5	NNC	ENSMUSG00000048000.16	novel	3015	4	NA	NA	5	-46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	76.9252884297485	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACTAAGTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	87254792	87283398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87262511_87262643_87282125_87282209_87282702
ES.946.51	chr1	+	5265	31	NNC	ENSMUSG00000048000.16	novel	3876	27	NA	NA	192	-728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	50.4400193849641	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGGGAATTTCATCT	NA	False	NA	NA	False	GATAAA	-15	NA	87254979	87377790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87255021_87255531_87255704_87260242_87260389_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.52	chr1	+	6001	29	NNC	ENSMUSG00000048000.16	novel	3876	27	NA	NA	212	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.9829076883284	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87254999	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87255391_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.53	chr1	+	272	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATATTAAA	6809	False	NA	NA	False	NA	NA	NA	87271427	87271699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87271400_87271700
ES.946.54	chr1	+	2351	2	FSM	ENSMUSG00000048000.16	ENSMUST00000172976.2	545	2	-1628	-178	-1269	178	multi-exon	FALSE	canonical	3	140	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8495	False	NA	NA	False	NA	NA	NA	87290254	87293555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87291956_87292905
ES.946.55	chr1	+	2474	1	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	-412	208	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATACCTTATTAAATA	9352	False	NA	NA	False	NA	NA	NA	87291111	87293585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87291100_87293600
ES.946.56	chr1	+	5487	26	ISM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	9657	-1651	-58	0	3prime_fragment	FALSE	canonical	3	77	junction_6	25.981531902488	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87291824	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.57	chr1	+	5469	26	ISM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	37074	-1651	-58	0	3prime_fragment	FALSE	canonical	3	42	junction_6	30.0772339153719	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87291824	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.58	chr1	+	4417	23	ISM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	51941	-939	-7347	-712	3prime_fragment	FALSE	canonical	3	42	junction_3	31.5662755494866	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCCTCAGAGCACCG	NA	False	NA	NA	False	GATAAA	-31	NA	87306691	87377806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.59	chr1	+	5122	23	NNC	ENSMUSG00000048000.16	novel	4029	29	NA	NA	-6351	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.9114196432479	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	False	NA	-17	True	NA	NA	NA	87307687	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87307731_87331388_87331569_87332668_87332798_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.6	chr1	+	5721	29	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_27	39.9502879864974	331	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254721	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371543_87374033_87374182_87376799
ES.946.60	chr1	+	5058	1	Antisense	novelGene_ENSMUSG00000079436.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAAACAACCT	NA	False	NA	NA	False	CATAAA	-19	NA	87322350	87327408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_87322400_87327400
ES.946.61	chr1	+	2827	8	NIC	ENSMUSG00000048000.16	novel	2826	18	NA	NA	-703	0	intron_retention	FALSE	canonical	3	124	junction_7	5.8970764115858	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7329	False	NA	NA	False	NA	NA	NA	87334397	87349588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87334924_87335014_87335178_87335256_87335446_87338383_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212
ES.946.64	chr1	+	3349	19	ISM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	52909	-468	-24	405	3prime_fragment	FALSE	canonical	3	124	junction_7	21.899320695254	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACCCCCTGGACAGTA	8008	False	NA	NA	False	AATAGA	-15	NA	87335076	87377335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.65	chr1	+	4408	18	ISM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	53088	-1627	155	-24	3prime_fragment	FALSE	canonical	3	124	junction_6	22.3489160462629	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	8187	False	NA	-17	True	NA	NA	NA	87335255	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.66	chr1	+	4844	3	NIC	ENSMUSG00000048000.16	novel	2330	18	NA	NA	-5368	23	intron_retention	FALSE	canonical	3	124	junction_2	4.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATGTTTGAATTAT	5954	False	NA	NA	False	NA	NA	NA	87342564	87349611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87346902_87348006_87348115_87349212
ES.946.67	chr1	+	3134	12	NNC	ENSMUSG00000048000.16	novel	3876	27	NA	NA	144	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	64.7784526975158	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTCTTGTACTC	NA	False	NA	19	True	AATAAA	-29	NA	87348076	87378530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87348115_87349212_87349314_87350902_87351004_87352786_87352871_87361592_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371543_87374033_87374182_87376799
ES.946.68	chr1	+	840	2	Genic_Genomic	ENSMUSG00000048000.16	novel	5724	29	NA	NA	792	23	multi-exon	FALSE	non_canonical	0	0	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATGTTTGAATTAT	NA	False	NA	NA	False	NA	NA	NA	87348724	87349611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_87348859_87348905
ES.946.70	chr1	+	2613	6	ISM	ENSMUSG00000048000.16	ENSMUST00000174671.8	3074	9	7266	24	-2942	-24	3prime_fragment	FALSE	canonical	3	125	junction_4	24.0383027687064	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	5443	False	NA	-17	True	NA	NA	NA	87368107	87378494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.946.8	chr1	+	4499	24	NNC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	3	-724	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	51.9773834777657	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAATTTCATCTGTTC	NA	False	NA	NA	False	GATAAA	-19	NA	87254727	87377794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87254815_87261991_87262057_87282125_87282209_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371545_87374033_87374182_87376799
ES.946.9	chr1	+	5637	28	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_1	37.3521777837007	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254728	87378518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87254815_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ES.9460.1	chr13	+	182	1	Intergenic	novelGene_7779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCCATCTTTGTAAC	NA	False	NA	NA	False	NA	NA	NA	64472878	64473060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64472900_64473100
ES.9461.1	chr13	-	177	1	Intergenic	novelGene_7780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	64476446	64476269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64476300_64476400
ES.9462.1	chr13	-	199	1	Intergenic	novelGene_7781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCACTTGGTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	64479427	64479228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64479200_64479400
ES.9463.1	chr13	-	749	1	Intergenic	novelGene_7782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTACAAATGGTTCTTGA	NA	False	NA	NA	False	AAAACA	-17	NA	64502396	64501647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64501600_64502400
ES.9464.1	chr13	-	5615	9	NNC	ENSMUSG00000021477.10	novel	6168	9	NA	NA	2	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	448.115620543404	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	64518118	64507155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64509641_64509866_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.11	chr13	-	4252	5	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	0	-583	intron_retention	FALSE	canonical	3	1187	junction_2	75.5194511367767	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGACTTCAGTGTGTA	NA	False	NA	-7	True	AATAAA	-21	NA	64518120	64511610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ES.9464.12	chr13	-	2444	7	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	-52	-583	intron_retention	FALSE	canonical	3	1187	junction_2	102.213284633435	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGACTTCAGTGTGTA	NA	False	NA	-7	True	AATAAA	-21	NA	64518172	64511610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.13	chr13	-	4240	4	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	0	-584	intron_retention	FALSE	canonical	3	1222	junction_3	64.0988819455275	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGGACTTCAGTGTGT	NA	False	NA	-8	True	AATAAA	-20	NA	64518120	64511611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64512015_64513018_64513137_64514292_64515821_64515929
ES.9464.14	chr13	-	1377	8	NNC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	2	-585	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	475.148011311277	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGGACTTCAGTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	64518118	64511612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515680_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.15	chr13	-	1117	6	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	-1	-585	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	536.513932717502	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGGACTTCAGTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	64518121	64511612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64516841_64516979_64518049
ES.9464.16	chr13	-	3247	6	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-1	585	-1	-585	intron_retention	FALSE	canonical	3	1187	junction_3	68.2114359913351	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGGACTTCAGTGTG	NA	False	NA	-9	True	AATAAA	-19	NA	64518121	64511612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ES.9464.17	chr13	-	2459	7	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-41	624	-41	-624	intron_retention	FALSE	canonical	3	1187	junction_3	91.5277735626369	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTACCTCTTAAAAATAA	NA	False	NA	30	True	TATAAA	-16	NA	64518161	64511651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841
ES.9464.19	chr13	-	1328	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-43	686	-43	-686	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTGCTTAATTCT	NA	False	NA	-32	True	TATAAA	-17	NA	64518163	64511713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.2	chr13	-	214	1	ISM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	8843	2497	5008	1380	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAAGTTCAGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	64509861	64509647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64509600_64509900
ES.9464.20	chr13	-	3164	6	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-19	686	-19	-686	intron_retention	FALSE	canonical	3	1187	junction_3	68.2114359913351	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTGCTTAATTCT	NA	False	NA	-32	True	TATAAA	-17	NA	64518139	64511713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ES.9464.21	chr13	-	4121	4	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	-50	-686	intron_retention	FALSE	canonical	3	1222	junction_2	90.1566537878499	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGTGCTTAATTCT	NA	False	NA	-32	True	TATAAA	-17	NA	64518170	64511713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64513137_64514292_64515821_64515929_64516979_64518049
ES.9464.3	chr13	-	2423	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-1	-451	-1	451	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATGAATAAAT	NA	False	NA	NA	False	NA	NA	NA	64518121	64510576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.4	chr13	-	2334	9	NNC	ENSMUSG00000021477.10	novel	6168	9	NA	NA	2	451	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	447.143363475295	373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATGAATAAAT	NA	False	NA	NA	False	NA	NA	NA	64518118	64510576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64510883_64510968_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.5	chr13	-	2025	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-56	2	-56	-2	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAAGTCTCATATC	NA	False	NA	NA	False	NA	NA	NA	64518176	64511029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.6	chr13	-	1803	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	-409	577	38	-577	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCAGTGTGTAATGTGT	NA	False	NA	-1	True	AATAAA	-27	NA	64518529	64511604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ES.9464.7	chr13	-	2176	7	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	2	-582	intron_retention	FALSE	canonical	3	1187	junction_3	84.9360870825169	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518118	64511609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516979_64518049
ES.9464.9	chr13	-	3288	5	NIC	ENSMUSG00000021477.10	novel	1971	8	NA	NA	2	-583	intron_retention	FALSE	canonical	3	1187	junction_2	92.4053569875686	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGACTTCAGTGTGTA	NA	False	NA	-7	True	AATAAA	-21	NA	64518118	64511610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_64513137_64514292_64514456_64514681_64514907_64515673_64516979_64518049
ES.9465.1	chr13	+	1992	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	73	2053	32	0	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTTGTGTTTTATTT	NA	False	NA	15	True	AATAAA	-15	NA	64580200	64587534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ES.9465.2	chr13	+	2305	6	NIC	ENSMUSG00000021483.9	novel	4118	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	39	junction_3	3.16227766016838	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTTGTGTTTTATTT	NA	False	NA	15	True	AATAAA	-15	NA	64580344	64587534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_64580905_64583931_64584121_64584306_64584643_64585202_64585327_64585690_64585847_64586594
ES.9465.3	chr13	+	1906	7	NIC	ENSMUSG00000021483.9	novel	4118	8	NA	NA	-135	0	intron_retention	FALSE	canonical	0	0	junction_3	16.2830859756033	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTTGTGTTTTATTT	NA	False	NA	15	True	AATAAA	-15	NA	64580658	64587534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_64580905_64583931_64584121_64584306_64584495_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ES.9466.1	chr13	+	174	1	Intergenic	novelGene_7783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATTTATCTATATC	NA	False	NA	NA	False	NA	NA	NA	64601699	64601873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64601700_64601900
ES.9467.1	chr13	-	167	1	Intergenic	novelGene_7784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTCTTAATAAACT	3499	False	NA	NA	False	NA	NA	NA	64621295	64621128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64621100_64621300
ES.9468.1	chr13	+	162	1	Intergenic	novelGene_7785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATTAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	64651298	64651460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64651300_64651500
ES.9469.1	chr13	+	2121	1	FSM	ENSMUSG00000094597.3	ENSMUST00000177721.3	1607	1	-316	-198	-316	198	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATTAAAGA	NA	False	NA	NA	False	NA	NA	NA	64656987	64659108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_64657000_64659100
ES.947.1	chr1	-	174	1	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	87284876	87284702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87284700_87284900
ES.9470.1	chr13	+	152	1	Intergenic	novelGene_7786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	64670771	64670923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_64670800_64670900
ES.9471.1	chr13	+	1074	5	Fusion	ENSMUSG00000113124.2_ENSMUSG00000113850.2	novel	500	2	NA	NA	-42741	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATCTTGACTCCTC	NA	False	NA	NA	False	AATAAA	-11	NA	64716932	64772810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_64717075_64739044_64739203_64743039_64743246_64767289_64767389_64772341
ES.9472.1	chr13	-	157	1	Intergenic	novelGene_7787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64724780	64724623	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64724600_64724800
ES.9473.1	chr13	-	173	1	Intergenic	novelGene_7788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTTTTTAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	64805153	64804980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_64805000_64805200
ES.9474.1	chr13	-	6341	24	NNC	ENSMUSG00000033063.9	novel	6344	24	NA	NA	-41	-39	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.47056821959024	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGCTGTTGTAATAA	1009	False	NA	NA	False	ACTAAA	-13	NA	65051810	64884034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64886483_64888359_64888432_64888627_64888850_64893522_64893611_64894550_64894685_64896246_64896472_64899490_64899731_64905018_64905238_64906062_64906234_64909732_64909861_64911938_64912096_64919769_64919968_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006604_65035506_65035618_65051560
ES.9474.2	chr13	-	5746	24	FSM	ENSMUSG00000033063.9	ENSMUST00000091554.6	6344	24	-45	643	-45	-643	multi-exon	FALSE	canonical	0	0	junction_1	1.47056821959024	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATATGTTCTGTGT	1005	False	NA	NA	False	NA	NA	NA	65051814	64884638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_64886483_64888359_64888432_64888627_64888850_64893522_64893611_64894550_64894685_64896246_64896472_64899490_64899731_64905018_64905238_64906062_64906234_64909732_64909861_64911938_64912096_64919769_64919971_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506_65035618_65051560
ES.9474.3	chr13	-	2517	14	NNC	ENSMUSG00000033063.9	novel	6344	24	NA	NA	-12	-15346	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.38033526499434	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGACAGATTATTGTT	1038	False	NA	NA	False	AATATA	-14	NA	65051781	64911788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_64912096_64919769_64919968_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506_65035618_65051560
ES.9475.1	chr13	+	132	1	Intergenic	novelGene_7789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAATAATTCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	65062795	65062927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65062800_65062900
ES.9476.1	chr13	-	6412	2	Intergenic	novelGene_7790	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65144585	65137967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65144033_65144238
ES.9477.1	chr13	+	213	1	Intergenic	novelGene_7791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTCAACCCTGACAAC	NA	False	NA	NA	False	NA	NA	NA	65169149	65169362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65169100_65169400
ES.9478.1	chr13	+	175	1	Intergenic	novelGene_7792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTGCCATG	NA	False	NA	NA	False	NA	NA	NA	65179356	65179531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65179400_65179500
ES.9479.1	chr13	+	432	1	Intergenic	novelGene_7793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGGAGAGACTTCAAC	NA	False	NA	NA	False	NA	NA	NA	65231149	65231581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65231100_65231600
ES.948.1	chr1	-	172	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGATGTGACCTCA	NA	False	NA	NA	False	NA	NA	NA	87310025	87309853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87309900_87310000
ES.9480.1	chr13	+	168	1	Intergenic	novelGene_7794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65240109	65240277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65240100_65240300
ES.9481.1	chr13	+	6479	2	Genic_Genomic	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-147215	1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCTGTGATAGCTGT	560	False	NA	27	True	AATAAA	-20	NA	65279412	65452036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65279421_65445565
ES.9481.10	chr13	+	7484	5	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-236	6121	intron_retention	FALSE	non_canonical	0	0	junction_3	14.2543852901484	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATGTTCCATATAAGT	NA	False	NA	NA	False	AATAAA	-15	NA	65389330	65404089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395844_65396789_65396883_65397381_65400951_65401155
ES.9481.11	chr13	+	3763	4	FSM	ENSMUSG00000110393.3	ENSMUST00000209951.2	1597	4	-218	-1948	-218	1915	multi-exon	FALSE	canonical	3	28	junction_1	3.55902608401044	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATAAAATGTAAGGT	NA	False	NA	NA	False	NA	NA	NA	65389348	65399883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789
ES.9481.12	chr13	+	7268	6	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-217	6125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.4350251052598	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCCATATAAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	65389349	65404093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789_65396883_65397381_65400951_65401155
ES.9481.13	chr13	+	5119	4	NNC	ENSMUSG00000110393.3	novel	1432	4	NA	NA	5725	4473	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	13.6707311029399	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTTTCTAATTCATATAA	NA	False	NA	6	True	NA	NA	NA	65395673	65402441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65395844_65396789_65396898_65397395_65400951_65401155
ES.9481.14	chr13	+	3596	1	Genic_Genomic	ENSMUSG00000110393.3	novel	NA	NA	NA	NA	6255	1831	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAGAAAATCCCAGCGT	NA	False	NA	NA	False	NA	NA	NA	65396203	65399799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65396200_65399800
ES.9481.15	chr13	+	1803	1	Intergenic	novelGene_7800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAAAAAAGAAAG	5641	False	NA	NA	False	NA	NA	NA	65421013	65422816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65421000_65422800
ES.9481.16	chr13	+	9377	9	NNC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-302	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.1459518266077	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426325	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65426353_65426743_65426933_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.17	chr13	+	9629	9	NNC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-294	-23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.4803586979296	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTATTGTGTGGAAC	NA	False	NA	2	True	ACTAAA	-17	NA	65426333	65452011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65426657_65426743_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.18	chr13	+	1482	8	NNC	ENSMUSG00000021514.19	novel	1580	8	NA	NA	-15	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.6115993043041	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTTTTTTTTTCTGCT	NA	False	NA	16	True	AATAAA	-9	NA	65426612	65452025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65426657_65426743_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65451631
ES.9481.19	chr13	+	9338	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	-4	-6425	-4	0	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGCTGTGATAGCT	NA	False	NA	25	True	AATAAA	-18	NA	65426623	65452034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.2	chr13	+	156	1	Intergenic	novelGene_7796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	65307517	65307673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65307500_65307700
ES.9481.20	chr13	+	1553	8	FSM	ENSMUSG00000021514.19	ENSMUST00000130799.8	1580	8	3	24	3	-23	multi-exon	FALSE	canonical	1	4	junction_7	17.3980998258724	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTATTGTGTGGAAC	NA	False	NA	2	True	ACTAAA	-17	NA	65426630	65452011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65451631
ES.9481.21	chr13	+	876	5	NIC	ENSMUSG00000021514.19	novel	1580	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	17.9234483289349	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426632	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65451631
ES.9481.22	chr13	+	1377	8	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	14	-1629	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.7829667938676	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTACCCTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	65426641	65443980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.23	chr13	+	1434	7	NIC	ENSMUSG00000021514.19	novel	1580	8	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_6	15.1840559652405	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426646	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65451631
ES.9481.24	chr13	+	8827	7	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	17.2884033065199	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426652	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65442209_65442299_65443413_65443541_65443876
ES.9481.25	chr13	+	9183	7	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-11	2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	18.4722013366632	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTGTGATAGCTGTT	NA	False	NA	28	True	AATAAA	-21	NA	65426654	65452037	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443876
ES.9481.26	chr13	+	9274	8	NNC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	20.3660381567963	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426655	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439780_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.27	chr13	+	9336	7	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-7	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.250603854165	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCTGTGATAGCTGT	NA	False	NA	27	True	AATAAA	-20	NA	65426658	65452036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426913_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.28	chr13	+	9409	8	NIC	ENSMUSG00000021514.19	novel	2909	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	15.7829667938676	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGCTGTGATAGCTG	NA	False	NA	26	True	AATAAA	-19	NA	65426664	65452035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426913_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.3	chr13	+	177	1	Intergenic	novelGene_7797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGCAT	NA	False	NA	NA	False	NA	NA	NA	65352220	65352397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65352200_65352400
ES.9481.30	chr13	+	1295	7	NIC	ENSMUSG00000021514.19	novel	1580	8	NA	NA	-1	-120	combination_of_known_splicesites	FALSE	canonical	3	17	junction_6	15.1840559652405	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGGTTAACAAGCTCAA	NA	False	NA	-95	True	AATAAA	-16	NA	65426664	65451914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65451631
ES.9481.31	chr13	+	3598	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	38	-727	0	727	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGAATAGTACTCCG	NA	False	NA	NA	False	NA	NA	NA	65426665	65446336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.33	chr13	+	8938	5	ISM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	6105	-6408	6016	-17	3prime_fragment	FALSE	canonical	3	32	junction_4	10.4642247682282	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTGTGGAACTTTTTT	NA	False	NA	8	True	AATAAA	-1	NA	65432732	65452017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ES.9481.34	chr13	+	5747	1	FSM	ENSMUSG00000021514.19	ENSMUST00000222364.2	1815	1	-3279	-653	-3279	652	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTTTGTTTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	65446940	65452687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65446900_65452700
ES.9481.35	chr13	+	308	1	FSM	ENSMUSG00000021514.19	ENSMUST00000222364.2	1815	1	1379	128	1379	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTCTAAGGTTAAC	NA	False	NA	NA	False	AATAAA	-8	NA	65451598	65451906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65451600_65451900
ES.9481.4	chr13	+	1681	4	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-380	2	intron_retention	FALSE	non_canonical	0	0	junction_3	13.4412301024373	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGTCTCAAAAATC	NA	False	NA	NA	False	NA	NA	NA	65389186	65397937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395844_65396789_65396883_65397381
ES.9481.6	chr13	+	5684	6	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-271	4487	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	15.4350251052598	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAACTTTCATCCCCTTA	NA	False	NA	20	True	NA	NA	NA	65389295	65402455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789_65396883_65397381_65400951_65401155
ES.9481.7	chr13	+	1398	5	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-257	11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	13.7727085208393	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTTGCTTTAATTT	NA	False	NA	NA	False	NA	NA	NA	65389309	65397979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789_65396882_65397381
ES.9481.8	chr13	+	6144	5	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-245	4474	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	13.7727085208393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTCTAATTCATATAAC	NA	False	NA	7	True	NA	NA	NA	65389321	65402442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789_65400951_65401155
ES.9481.9	chr13	+	5639	6	NNC	ENSMUSG00000110393.3	novel	1597	4	NA	NA	-238	4476	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	15.4350251052598	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAATTCATATAACTT	NA	False	NA	9	True	NA	NA	NA	65389328	65402444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789_65396898_65397397_65400951_65401155
ES.9482.1	chr13	-	3586	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	6	117	intron_retention	FALSE	canonical	0	0	junction_5	147.384637615183	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTTCTTGAAAATC	NA	False	NA	0	True	ATTAAA	-20	NA	65260766	65212842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221585_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.10	chr13	-	3385	13	FSM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	-26	-108	-25	108	multi-exon	FALSE	canonical	0	0	junction_12	144.098827969634	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	-9	True	ATTAAA	-11	NA	65260814	65212851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317_65260473_65260569
ES.9482.11	chr13	-	3365	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	3	108	intron_retention	FALSE	non_canonical	0	0	junction_3	149.68589702639	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	-9	True	ATTAAA	-11	NA	65260785	65212851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217510_65219860_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.13	chr13	-	4409	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	32	108	intron_retention	FALSE	canonical	3	418	junction_5	42.3018912106776	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	-9	True	ATTAAA	-11	NA	65260740	65212851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.15	chr13	-	3380	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	4	108	intron_retention	FALSE	canonical	1	1	junction_4	150.209165460799	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGATTTTAAGTTTC	NA	False	NA	-9	True	ATTAAA	-11	NA	65260784	65212851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219860_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.16	chr13	-	3417	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	107	intron_retention	FALSE	non_canonical	0	0	junction_1	148.599578433937	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGATTTTAAGTTT	NA	False	NA	-10	True	ATTAAA	-10	NA	65260765	65212852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214655_65215670_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.17	chr13	-	3303	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	37	106	intron_retention	FALSE	canonical	3	5	junction_2	152.659392111982	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGATTTTAAGTT	NA	False	NA	-11	True	ATTAAA	-9	NA	65260735	65212853	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.18	chr13	-	3388	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	-24	468	-24	15	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTGTCATTGCTCTTT	NA	False	NA	0	True	AATAAA	-32	NA	65260813	65212944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.19	chr13	-	3118	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	9	14	intron_retention	FALSE	canonical	0	0	junction_6	156.08103664443	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGTCATTGCTCTT	NA	False	NA	-1	True	AATAAA	-31	NA	65260763	65212945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.20	chr13	-	3276	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	14	intron_retention	FALSE	canonical	0	0	junction_9	155.148992906818	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGTCATTGCTCTT	NA	False	NA	-1	True	AATAAA	-31	NA	65260765	65212945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65243432_65243529_65260317
ES.9482.21	chr13	-	4601	11	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	32	14	intron_retention	FALSE	canonical	3	27	junction_7	146.682957428598	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGTCATTGCTCTT	NA	False	NA	-1	True	AATAAA	-31	NA	65260740	65212945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.22	chr13	-	3329	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	10	14	intron_retention	FALSE	canonical	0	0	junction_5	147.384637615183	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTCTGTCATTGCTCTT	NA	False	NA	-1	True	AATAAA	-31	NA	65260762	65212945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221435_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.23	chr13	-	6231	10	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	9	intron_retention	FALSE	canonical	0	0	junction_4	162.478336637668	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTTCTGTCATTG	NA	False	NA	-6	True	AATAAA	-26	NA	65260765	65212950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65222914_65223196_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.24	chr13	-	3196	11	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	1	9	intron_retention	FALSE	canonical	2	4	junction_4	153.318263752235	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTTCTGTCATTG	NA	False	NA	-6	True	AATAAA	-26	NA	65260771	65212950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219860_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.25	chr13	-	3264	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	6	9	intron_retention	FALSE	canonical	3	27	junction_8	142.903539101043	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTTCTGTCATTG	NA	False	NA	-6	True	AATAAA	-26	NA	65260766	65212950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.27	chr13	-	4688	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	10	8	intron_retention	FALSE	canonical	3	418	junction_5	39.7924615976443	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAATTTCTGTCATT	NA	False	NA	-7	True	AATAAA	-25	NA	65260762	65212951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.28	chr13	-	3219	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	8	intron_retention	FALSE	canonical	2	47	junction_5	140.407300380002	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAACAATTTCTGTCATT	NA	False	NA	-7	True	AATAAA	-25	NA	65260765	65212951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.29	chr13	-	4998	10	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	2	intron_retention	FALSE	canonical	3	27	junction_6	154.102018477259	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCTTAAAAACAATTTCT	NA	False	NA	-13	True	AATAAA	-19	NA	65260765	65212957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.3	chr13	-	3312	13	NNC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	49	117	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	144.098827969634	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTTCTTGAAAATC	NA	False	NA	0	True	ATTAAA	-20	NA	65260723	65212842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317_65260482_65260569
ES.9482.30	chr13	-	5034	10	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	50	1	intron_retention	FALSE	canonical	3	27	junction_6	157.193990398119	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGCTTAAAAACAATTTC	NA	False	NA	-14	True	AATAAA	-18	NA	65260722	65212958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65221442_65222799_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.31	chr13	-	3589	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	-24	1	intron_retention	FALSE	canonical	0	0	junction_3	149.68589702639	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGCTTAAAAACAATTTC	NA	False	NA	-14	True	AATAAA	-18	NA	65260813	65212958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217771_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.32	chr13	-	3157	11	NNC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	6	0	intron_retention	FALSE	canonical	3	5	junction_2	197.852065948274	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260766	65212959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.34	chr13	-	3679	11	NIC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	37	0	intron_retention	FALSE	canonical	3	442	junction_7	34.0757978629995	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260735	65212959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.35	chr13	-	3224	13	FSM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	26	1	10	-1	multi-exon	FALSE	canonical	0	0	junction_12	144.098827969634	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGCTTAAAAACAATT	NA	False	NA	-16	True	AATAAA	-16	NA	65260762	65212960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317_65260473_65260569
ES.9482.36	chr13	-	3177	13	NNC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	67	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	144.098827969634	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGCTTAAAAACAATT	NA	False	NA	-16	True	AATAAA	-16	NA	65260705	65212960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317_65260483_65260569
ES.9482.37	chr13	-	6158	10	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	-14	-1	intron_retention	FALSE	canonical	3	418	junction_4	40.7406734006178	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGCTTAAAAACAATT	NA	False	NA	-16	True	AATAAA	-16	NA	65260803	65212960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.38	chr13	-	3424	13	NNC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	4	-1	intron_retention	FALSE	canonical	0	0	junction_8	192.230908602707	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGCTTAAAAACAATT	NA	False	NA	-16	True	AATAAA	-16	NA	65260768	65212960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65227542_65227640_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.39	chr13	-	3304	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	-3	-1	intron_retention	FALSE	non_canonical	0	0	junction_11	150.363251620921	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGCTTAAAAACAATT	NA	False	NA	-16	True	AATAAA	-16	NA	65260792	65212960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243491_65260326
ES.9482.40	chr13	-	3170	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	17	-2	intron_retention	FALSE	canonical	1	1	junction_4	195.050491449973	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGGCTTAAAAACAAT	NA	False	NA	-17	True	AATAAA	-15	NA	65260755	65212961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219860_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.41	chr13	-	3287	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	36	-2	intron_retention	FALSE	non_canonical	0	0	junction_7	149.241332098757	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGGCTTAAAAACAAT	NA	False	NA	-17	True	AATAAA	-15	NA	65260736	65212961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226174_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.42	chr13	-	3472	14	NNC	ENSMUSG00000038212.17	novel	3251	13	NA	NA	-61270	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	215.292095513357	523	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGGCTTAAAAACAAT	NA	False	NA	-17	True	AATAAA	-15	NA	65322059	65212961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65268903_65269142_65306098_65306210_65321811
ES.9482.43	chr13	-	3225	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	7	-77	intron_retention	FALSE	canonical	0	0	junction_11	150.363251620921	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACATATCTTTTTACTA	NA	False	NA	-92	True	AATATA	-29	NA	65260765	65213036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243506_65260317
ES.9482.44	chr13	-	3183	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	24	625	7	-142	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATATTGACTGAATAC	NA	False	NA	NA	False	TATAAA	-44	NA	65260765	65213101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.45	chr13	-	3020	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	24	788	7	-305	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTCTATCTTCAACAA	NA	False	NA	NA	False	AGTAAA	-12	NA	65260765	65213264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.46	chr13	-	1590	9	NNC	ENSMUSG00000038212.17	novel	1973	2	NA	NA	37	-5929	intron_retention	FALSE	canonical	0	0	junction_1	168.633292976209	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTGGTAATTTTGTG	NA	False	NA	NA	False	ATTAAA	-5	NA	65260735	65220318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65220684_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.47	chr13	-	8652	2	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	53	22335	37	-20905	intron_retention	FALSE	canonical	3	480	junction_1	0	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCAAAAAAAAAAAAATATT	NA	False	NA	NA	False	AATACA	-13	NA	65260735	65235294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_65243529_65260317
ES.9482.48	chr13	-	3325	1	Intergenic	novelGene_7795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65251853	65248528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65248500_65251900
ES.9482.49	chr13	-	6678	1	Genic_Genomic	ENSMUSG00000038212.17	novel	NA	NA	NA	NA	1888	6498	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAACAAGCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	65258884	65252206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65252200_65258900
ES.9482.5	chr13	-	3424	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	-5	114	intron_retention	FALSE	canonical	0	0	junction_1	148.599578433937	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAAGTTTCTTGAAA	NA	False	NA	-3	True	ATTAAA	-17	NA	65260794	65212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215720_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.6	chr13	-	3273	11	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	29	114	intron_retention	FALSE	canonical	2	4	junction_4	153.318263752235	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAAGTTTCTTGAAA	NA	False	NA	-3	True	ATTAAA	-17	NA	65260743	65212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219860_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.7	chr13	-	4798	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	6	114	intron_retention	FALSE	canonical	3	418	junction_5	39.7924615976443	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAAGTTTCTTGAAA	NA	False	NA	-3	True	ATTAAA	-17	NA	65260766	65212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.8	chr13	-	3401	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	-9	114	intron_retention	FALSE	canonical	3	27	junction_8	142.903539101043	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAAGTTTCTTGAAA	NA	False	NA	-3	True	ATTAAA	-17	NA	65260798	65212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9482.9	chr13	-	3343	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	5	114	intron_retention	FALSE	canonical	2	47	junction_5	140.407300380002	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAAGTTTCTTGAAA	NA	False	NA	-3	True	ATTAAA	-17	NA	65260783	65212845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ES.9483.1	chr13	-	3656	11	NIC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	17.7302002244758	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTTCTAATCTCAAAT	NA	False	NA	-6	True	ATTAAA	-25	NA	65353756	65324923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353628
ES.9483.11	chr13	-	2027	9	NIC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	17.8518206354422	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353605	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65346982_65347285_65353433
ES.9483.12	chr13	-	2316	10	NNC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.0529251833648	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353612	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65342129_65346982_65347238_65353433
ES.9483.13	chr13	-	3492	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_7	20.1385203031404	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353794	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338744_65341799_65343370_65346982_65347285_65353433_65353531_65353776
ES.9483.15	chr13	-	3565	11	NIC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	17.1813852759316	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353753	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353710
ES.9483.17	chr13	-	3433	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.3803199322732	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353655	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329410_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338744_65341799_65343370_65346982_65347285_65353433_65353531_65353628
ES.9483.18	chr13	-	3380	10	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	21.3495308879564	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGTCTACTGACTTCTAA	NA	False	NA	-14	True	ATTAAA	-17	NA	65353795	65324931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65341799_65343370_65346982_65347285_65353433_65353531_65353776
ES.9483.19	chr13	-	4946	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	21.9052505121489	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCTACTGACTTCT	NA	False	NA	-16	True	ATTAAA	-15	NA	65353797	65324933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65344287_65346492_65347285_65353433_65353531_65353776
ES.9483.20	chr13	-	3197	9	NIC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	-66	210	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.6597829569371	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTTAGGATCTCTTAA	NA	False	NA	NA	False	AATACA	-16	NA	65353596	65325146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65325478_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
ES.9483.21	chr13	-	3329	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	6	209	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	17.4553716660517	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTTAGGATCTCTTA	NA	False	NA	NA	False	AATACA	-15	NA	65353773	65325147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353748
ES.9483.23	chr13	-	5323	10	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-4	-1656	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	16.9407099709837	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGTTTGAATATTTGA	NA	False	NA	NA	False	AATATA	-40	NA	65353795	65327012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353776
ES.9483.24	chr13	-	4047	10	ISM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	6	3363	3	-2937	5prime_fragment	FALSE	canonical	3	10	junction_9	15.8191944668572	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATCTCTGTGGTTTGTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	65353776	65328293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
ES.9483.25	chr13	-	3671	10	NIC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	6	-3412	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	18.6554198923001	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGTATGTTGCATGA	NA	False	NA	NA	False	NA	NA	NA	65353751	65328768	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353628
ES.9483.26	chr13	-	3678	10	NNC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	-15190	-3413	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	18.3673085859458	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGTGTATGTTGCATG	NA	False	NA	NA	False	NA	NA	NA	65368981	65328769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65368850
ES.9483.27	chr13	-	3570	10	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	-29	-3434	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	16.9407099709837	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTAACATTTTCACTG	NA	False	NA	NA	False	NA	NA	NA	65353820	65328790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353776
ES.9483.4	chr13	-	3561	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	-4	-6	-4	0	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGACTTCTAATCTCAAA	NA	False	NA	-7	True	ATTAAA	-24	NA	65353786	65324924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
ES.9483.6	chr13	-	3453	9	NIC	ENSMUSG00000032999.11	novel	3527	10	NA	NA	-103	2	intron_retention	FALSE	canonical	0	0	junction_1	18.6597829569371	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTGACTTCTAATCTC	NA	False	NA	-10	True	ATTAAA	-21	NA	65353633	65324927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65325478_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
ES.9483.8	chr13	-	3597	11	NNC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	21.2828569510768	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353751	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338744_65341799_65343370_65346982_65347285_65353433_65353531_65353628
ES.9483.9	chr13	-	7414	10	NIC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_9	15.8191944668572	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTACTGACTTCTAATC	NA	False	NA	-12	True	ATTAAA	-19	NA	65353779	65324929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
ES.9484.1	chr13	-	1625	1	Intergenic	novelGene_7798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACAGTTTCCGTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	65375752	65374127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65374100_65375800
ES.9485.1	chr13	-	179	1	Intergenic	novelGene_7799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATTAACA	NA	False	NA	NA	False	NA	NA	NA	65418835	65418656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65418700_65418800
ES.9486.1	chr13	-	1514	1	Intergenic	novelGene_7801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTTTTTCTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	65426550	65425036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65425000_65426600
ES.9487.1	chr13	+	3173	2	Intergenic	novelGene_7802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	65457199	65461418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65458898_65459943
ES.9487.10	chr13	+	2772	2	Antisense	novelGene_ENSMUSG00000114031.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATGAGAGGGAGATGC	NA	False	NA	NA	False	NA	NA	NA	65626363	65629336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65628767_65628967
ES.9487.100	chr13	+	3304	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-122	32397	intron_retention	FALSE	non_canonical	0	0	junction_4	57.4581586896065	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAAGTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	66261171	66358311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327533_66327591_66328126_66358215
ES.9487.101	chr13	+	3200	8	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-75	251	intron_retention	FALSE	canonical	0	0	junction_3	56.3628912512841	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGCATATATTTATG	NA	False	NA	NA	False	NA	NA	NA	66261218	66346621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66334416_66334495_66340135_66340278_66341741_66341914_66343066_66343121_66344211
ES.9487.102	chr13	+	3202	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-72	1321	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261221	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269316
ES.9487.103	chr13	+	7876	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-63	6155	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	104.386972367245	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTACCCTCATCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	66261230	66276805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261436_66267450_66267578_66267777_66267839_66269026_66269720_66269973_66273185_66273226
ES.9487.104	chr13	+	3203	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-61	2305	intron_retention	TRUE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261232	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327535_66327631
ES.9487.105	chr13	+	2222	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-59	32397	multi-exon	TRUE	non_canonical	0	0	junction_4	55.0187352134688	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAAGTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	66261234	66358311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325525_66326525_66327361_66327512_66327619_66328108_66358197
ES.9487.106	chr13	+	2792	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-59	6360	multi-exon	FALSE	non_canonical	0	0	junction_5	53.7514857675788	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGACGGTCTCTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	66261234	66332274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327512_66327607_66327791_66331807
ES.9487.107	chr13	+	3273	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-59	-1689	-59	1321	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261234	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ES.9487.108	chr13	+	2405	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-59	874	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTCACTGTACTCTTT	NA	False	NA	NA	False	NA	NA	NA	66261234	66271524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270241_66270408
ES.9487.109	chr13	+	1618	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-55	6360	multi-exon	FALSE	canonical	2	6	junction_5	52.4389168461745	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGACGGTCTCTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	66261238	66332274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66326525_66331807
ES.9487.11	chr13	+	3679	3	Fusion	ENSMUSG00000113468.2_ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	459	1094	intron_retention	TRUE	non_canonical	0	0	junction_1	0	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCACCAGGATGTTGAAT	NA	False	NA	NA	False	NA	NA	NA	65636080	65663886	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65636097_65660158_65661130_65661194
ES.9487.110	chr13	+	2724	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-49	2305	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261244	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327512_66327627
ES.9487.111	chr13	+	4091	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-49	2233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCCTTTGTCCTTTG	NA	False	NA	NA	False	NA	NA	NA	66261244	66272883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269569_66269652
ES.9487.112	chr13	+	4180	7	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113477.2	novel	1525	4	NA	NA	-49	1429	multi-exon	FALSE	canonical	0	0	junction_6	47.1616605117146	456	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATAATCTTAGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	66261244	66314305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66310742
ES.9487.113	chr13	+	3177	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-48	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261245	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.114	chr13	+	3174	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-46	2302	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261247	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327512_66327619
ES.9487.115	chr13	+	3174	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-46	1317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261247	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269581_66269662
ES.9487.116	chr13	+	3178	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-40	2301	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	2	True	AATAAA	-20	NA	66261253	66328215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327515_66327611
ES.9487.118	chr13	+	4222	12	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-39	708	multi-exon	FALSE	non_canonical	0	0	junction_5	47.7209519624069	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	66261254	66345281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327512_66327607_66327791_66334416_66334495_66340135_66340278_66341741_66341914_66342262_66342345_66343066_66343121_66344211
ES.9487.119	chr13	+	2782	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-39	2333	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGACTTCCGGTGGCC	NA	False	NA	34	True	AATAAA	-17	NA	66261254	66328247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327511_66327586
ES.9487.12	chr13	+	10474	2	NNC	ENSMUSG00000113618.2	novel	1660	2	NA	NA	-2367	-128982	intron_retention	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTGTGTATTGCTTG	NA	False	NA	NA	False	AATAAA	-19	NA	65638936	65649606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65645870_65646065
ES.9487.120	chr13	+	3194	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-39	1318	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	63.2336935501952	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261254	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66268998_66270200_66270283
ES.9487.121	chr13	+	3166	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-39	1318	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261254	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269528_66269611
ES.9487.122	chr13	+	2234	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-38	32400	multi-exon	TRUE	non_canonical	0	0	junction_6	54.3649797241585	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTCTTCCTCGG	NA	False	NA	NA	False	AATAAA	-29	NA	66261255	66358314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66326525_66327361_66327533_66327614_66328108_66358197
ES.9487.123	chr13	+	4948	13	Fusion	ENSMUSG00000095909.3_ENSMUSG00000114684.3	novel	1329	5	NA	NA	-38	257	intron_retention	TRUE	non_canonical	0	0	junction_4	45.570458267025	622	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTTACTTTACTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	66261255	66665925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66326647_66356643_66357256_66647537_66647808_66647966_66648116_66654710_66654789_66660218_66660361_66660443_66660507_66661897_66661988_66662995_66663221_66664310
ES.9487.124	chr13	+	2362	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-38	2302	intron_retention	TRUE	non_canonical	0	0	junction_5	56.0321336377618	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261255	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66326525_66327361_66327521_66327595
ES.9487.125	chr13	+	574	3	FSM	ENSMUSG00000095909.3	ENSMUST00000238355.2	449	3	-38	-87	-38	87	multi-exon	FALSE	canonical	3	113	junction_1	13.5	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	66261255	66268105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66261375_66267450_66267578_66267777
ES.9487.126	chr13	+	4193	10	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-38	710	intron_retention	TRUE	non_canonical	0	0	junction_4	50.8653511795336	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66261255	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327523_66327635_66327791_66334416_66334495_66340135_66340278_66341801_66341914_66343066_66343121_66344211
ES.9487.127	chr13	+	2854	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-38	2309	multi-exon	FALSE	non_canonical	0	0	junction_6	57.2055261510828	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAAGTTTCTTCCTCG	NA	False	NA	10	True	AATAAA	-28	NA	66261255	66328223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66316575_66316704_66325249_66325393_66325840_66327516_66327622
ES.9487.128	chr13	+	4013	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	1316	intron_retention	FALSE	non_canonical	0	0	junction_3	63.966299721025	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	66261256	66271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66269434_66269686_66270241_66270408
ES.9487.129	chr13	+	3359	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	1318	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	98.973165555114	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261256	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66269026
ES.9487.13	chr13	+	6296	1	Antisense	novelGene_ENSMUSG00000113955.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTCTGAGATTCCTT	3542	False	NA	NA	False	AATAAA	-32	NA	65643323	65649619	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65643300_65649600
ES.9487.130	chr13	+	2912	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261256	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270454_66270537
ES.9487.131	chr13	+	2729	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	2302	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261256	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327512_66327607
ES.9487.132	chr13	+	1908	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-37	2302	multi-exon	FALSE	non_canonical	0	0	junction_6	53.6016687136594	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261256	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66326525_66327361_66327511_66327590
ES.9487.133	chr13	+	4429	3	FSM	ENSMUSG00000095909.3	ENSMUST00000238355.2	449	3	-37	-3943	-37	1311	multi-exon	FALSE	canonical	3	113	junction_1	13.5	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGGAACCTTGACTTA	NA	False	NA	NA	False	NA	NA	NA	66261256	66271961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66261375_66267450_66267578_66267777
ES.9487.134	chr13	+	3235	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-36	6362	intron_retention	FALSE	non_canonical	0	0	junction_4	56.2295296085607	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	66261257	66332276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327511_66327590_66327791_66331807
ES.9487.135	chr13	+	3176	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-36	2302	intron_retention	FALSE	non_canonical	0	0	junction_4	46.2405395729764	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261257	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66309508_66309570_66325249_66327512_66327607
ES.9487.136	chr13	+	3076	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-35	1316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	66261258	66271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269276_66269443
ES.9487.137	chr13	+	2717	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-35	2300	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261258	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327512_66327615
ES.9487.138	chr13	+	3389	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-35	1882	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCAGGCCCAATTAAATA	NA	False	NA	NA	False	NA	NA	NA	66261258	66272532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270241_66270408
ES.9487.139	chr13	+	3163	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-35	2305	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261258	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327516_66327626
ES.9487.14	chr13	+	3745	9	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-14782	683	intron_retention	TRUE	non_canonical	0	0	junction_3	12.0701077045733	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGTCCTGTGTTTAC	5928	False	NA	NA	False	NA	NA	NA	65645709	65663475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65645870_65646065_65646144_65646423_65646466_65658192_65658320_65658519_65658581_65659713_65659845_65660180_65660551_65660634_65661130_65661194
ES.9487.140	chr13	+	518	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	249	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.642852468824	452	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCTCATGAACATA	NA	False	NA	NA	False	NA	NA	NA	66261259	66270899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66270684
ES.9487.141	chr13	+	1317	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	312383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.642852468824	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAATAACTTAGCATTG	NA	False	NA	NA	False	AATAAA	-26	NA	66261259	66583033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66582019
ES.9487.142	chr13	+	2095	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	256	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCATGAACATAATCAATG	NA	False	NA	NA	False	NA	NA	NA	66261259	66270906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66270190_66270277
ES.9487.143	chr13	+	3185	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	2305	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261259	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327512_66327599
ES.9487.144	chr13	+	3293	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	1318	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	103.781693954184	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261259	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264008_66264140_66267450_66267578_66267777_66267839_66269026_66269641_66269723
ES.9487.145	chr13	+	1953	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-34	2302	multi-exon	FALSE	canonical	2	6	junction_4	50.637535485053	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261259	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66326525_66327712
ES.9487.146	chr13	+	3158	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	2302	intron_retention	TRUE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261260	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327523_66327633
ES.9487.148	chr13	+	2095	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	253	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTCATGAACATAATCA	NA	False	NA	NA	False	NA	NA	NA	66261260	66270903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269554_66269637
ES.9487.149	chr13	+	3357	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	2300	intron_retention	FALSE	non_canonical	0	0	junction_5	61.1640417238756	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261260	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66316502_66316704_66325249_66327516_66327626
ES.9487.15	chr13	+	3594	6	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10272	682	intron_retention	FALSE	non_canonical	0	0	junction_4	13.5499077487635	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	65651728	65663474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65660290_65660709_65661130_65661194
ES.9487.150	chr13	+	2986	11	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-33	-139	multi-exon	FALSE	non_canonical	0	0	junction_5	48.3922514458668	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTTTCACTACTTAAT	NA	False	NA	NA	False	AATATA	-32	NA	66261260	66344434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327510_66327587_66327791_66334416_66334495_66340135_66340278_66341741_66341914_66343066_66343121_66344211
ES.9487.151	chr13	+	4237	12	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	767	5	NA	NA	-33	710	multi-exon	FALSE	non_canonical	0	0	junction_5	46.7223202186232	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66261260	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327511_66327606_66327791_66334416_66334495_66340135_66340278_66341173_66341594_66341741_66341914_66343066_66343121_66344211
ES.9487.152	chr13	+	3549	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	2300	intron_retention	FALSE	non_canonical	0	0	junction_7	53.9413892052082	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261260	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66316502_66316704_66325249_66327516_66327622
ES.9487.153	chr13	+	3376	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	32615	intron_retention	TRUE	non_canonical	0	0	junction_4	57.4581586896065	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGGGTGCAAACTGAC	NA	False	NA	NA	False	NA	NA	NA	66261260	66358529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327512_66327627_66328397_66358486
ES.9487.154	chr13	+	3565	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-33	1317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	62.5574935559282	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261260	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66268283_66269434_66269686_66270241_66270408
ES.9487.155	chr13	+	5277	10	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-30	710	intron_retention	FALSE	non_canonical	0	0	junction_5	51.1642236115997	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66261263	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327512_66327619_66327791_66334416_66334494_66340135_66340278_66341741_66343125_66344211
ES.9487.156	chr13	+	3035	9	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2302	multi-exon	FALSE	non_canonical	0	0	junction_8	50.4603804979709	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261264	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66316575_66316704_66325249_66325393_66325840_66327509_66327606
ES.9487.157	chr13	+	2815	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2302	multi-exon	TRUE	non_canonical	0	0	junction_6	8.11719710792395	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261264	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66264730_66264842_66267450_66267578_66309508_66309570_66325249_66325393_66325840_66327535_66327647
ES.9487.158	chr13	+	3157	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1318	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269569_66269651
ES.9487.159	chr13	+	4344	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1319	intron_retention	FALSE	canonical	0	0	junction_3	60.642852468824	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66269602_66269686
ES.9487.16	chr13	+	5660	5	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8760	-235	multi-exon	FALSE	non_canonical	0	0	junction_4	12.9687123493429	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	1	True	NA	NA	NA	65651731	65662557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65651859_65655626_65658320_65658519_65658581_65659713_65661130_65661194
ES.9487.160	chr13	+	3267	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	98.7230469545992	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261264	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66269026_66269581_66269663
ES.9487.161	chr13	+	2954	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2534	multi-exon	TRUE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCTGACAGGCGGTTT	NA	False	NA	NA	False	AATGAA	-24	NA	66261264	66328448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327524_66327618
ES.9487.162	chr13	+	3202	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2300	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261264	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327534_66327594
ES.9487.163	chr13	+	3580	9	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2300	intron_retention	FALSE	non_canonical	0	0	junction_8	42.5042277308975	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261264	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66316575_66316704_66325249_66327517_66327626
ES.9487.164	chr13	+	3346	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2302	intron_retention	TRUE	non_canonical	0	0	junction_6	54.3200392734271	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261264	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66325249_66327524_66327630
ES.9487.165	chr13	+	467	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1320	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	53.2436746373585	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	66261264	66271970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66271801
ES.9487.166	chr13	+	3472	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2300	intron_retention	FALSE	non_canonical	0	0	junction_7	53.2403100314498	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261264	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66316575_66316704_66325249_66327516_66327622
ES.9487.167	chr13	+	3158	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1321	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269222_66269306
ES.9487.168	chr13	+	3755	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1917	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCACAGTTTG	NA	False	NA	NA	False	NA	NA	NA	66261264	66272567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269467_66269550
ES.9487.169	chr13	+	3187	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1321	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	107.892307418092	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261403_66267450_66267578_66267777_66267839_66269026_66269467_66269550
ES.9487.17	chr13	+	3838	8	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8752	58145	intron_retention	TRUE	non_canonical	0	0	junction_4	12.869835005206	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCCTGTATGTGCAAA	NA	False	NA	NA	False	NA	NA	NA	65651739	65720937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65659845_65660180_65660572_65660655_65661130_65661194_65663709_65720916
ES.9487.170	chr13	+	4034	12	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-29	546	multi-exon	FALSE	non_canonical	0	0	junction_4	48.0285727630219	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACACAATGCGTTGCAACA	NA	False	NA	NA	False	AATAAA	-30	NA	66261264	66345119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325525_66327512_66327619_66327791_66334416_66334495_66340135_66340278_66341741_66341914_66342262_66342345_66343066_66343121_66344211
ES.9487.171	chr13	+	3269	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.7230469545992	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.172	chr13	+	2939	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2540	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACAGGCGGTTTTTCAAG	NA	False	NA	NA	False	AATGAA	-30	NA	66261264	66328454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327512_66327627
ES.9487.173	chr13	+	3268	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2302	intron_retention	FALSE	non_canonical	0	0	junction_5	49.7449494923857	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261264	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66264730_66264842_66267450_66267578_66267777_66267839_66325249_66327512_66327619
ES.9487.174	chr13	+	2712	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	872	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTGTCACTGTACTCT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269314
ES.9487.175	chr13	+	3748	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1911	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTGCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	66261264	66272561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.176	chr13	+	2042	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	6362	intron_retention	FALSE	canonical	2	6	junction_4	52.5232091555724	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	66261264	66332276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66326525_66331807
ES.9487.177	chr13	+	2732	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	101.788800955704	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267781_66267839_66269026_66269434_66269686_66270107_66270358
ES.9487.178	chr13	+	4385	11	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-29	702	intron_retention	FALSE	non_canonical	0	0	junction_4	49.5262556630319	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTCTATGATGTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	66261264	66345275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327512_66327627_66327791_66334416_66334495_66340135_66340278_66340360_66340424_66341823_66341914_66342895_66343121_66344211
ES.9487.179	chr13	+	3231	7	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.4759881691166	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66263982_66264140_66267450_66267578_66267777_66267839_66269026_66269602_66269686_66270464_66270547
ES.9487.18	chr13	+	3259	6	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10261	358	intron_retention	FALSE	non_canonical	0	0	junction_4	13.5499077487635	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATTTCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	65651739	65663150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65660290_65660709_65661130_65661194
ES.9487.180	chr13	+	3159	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1320	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	66261264	66271970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269625_66269707
ES.9487.181	chr13	+	4532	12	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	767	5	NA	NA	-29	706	multi-exon	FALSE	non_canonical	0	0	junction_4	47.5319814040857	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGATGTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	66261264	66345279	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325525_66327512_66327619_66327791_66334416_66334495_66340135_66340278_66341173_66341594_66341741_66341914_66343066_66343121_66344211
ES.9487.182	chr13	+	3267	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.455625212166	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261264	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261403_66267450_66267578_66267777_66267839_66269026
ES.9487.183	chr13	+	2906	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	1321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261264	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270283_66270366
ES.9487.184	chr13	+	3152	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	2299	intron_retention	TRUE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAACCTGGAAATAAAGT	NA	False	NA	0	True	AATAAA	-18	NA	66261264	66328213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327535_66327644
ES.9487.186	chr13	+	3184	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-29	32407	intron_retention	TRUE	non_canonical	0	0	junction_4	57.4581586896065	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTCGGTTTATAA	NA	False	NA	NA	False	AATAAA	-36	NA	66261264	66358321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327512_66327607_66328154_66358243
ES.9487.187	chr13	+	3838	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-28	-2285	-28	1917	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCACAGTTTG	NA	False	NA	NA	False	NA	NA	NA	66261265	66272567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ES.9487.188	chr13	+	3173	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-28	2302	intron_retention	TRUE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261265	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327528_66327618
ES.9487.189	chr13	+	4553	12	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	767	5	NA	NA	-27	710	multi-exon	TRUE	non_canonical	0	0	junction_5	47.209573199224	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66261266	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327530_66327622_66327791_66334416_66334495_66340135_66340278_66341173_66341594_66341741_66341914_66343066_66343121_66344211
ES.9487.19	chr13	+	4387	7	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10259	1301	intron_retention	FALSE	non_canonical	0	0	junction_5	12.979684981625	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGATGGACTGTGAT	NA	False	NA	NA	False	NA	NA	NA	65651741	65664093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65653132_65653320_65658192_65658320_65658519_65658581_65659713_65660290_65660709_65661130_65661194
ES.9487.190	chr13	+	3450	9	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-27	-1128	multi-exon	FALSE	non_canonical	0	0	junction_5	52.6853869683046	492	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATAGTATAATCTTAC	NA	False	NA	NA	False	NA	NA	NA	66261266	66340978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327512_66327607_66327791_66334416_66334495_66340135_66340278_66340360
ES.9487.191	chr13	+	5071	13	Fusion	ENSMUSG00000095909.3_ENSMUSG00000114684.3	novel	1329	5	NA	NA	-27	392	intron_retention	FALSE	non_canonical	0	0	junction_4	45.570458267025	622	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTGTCTGAGATTCC	NA	False	NA	NA	False	AATAAA	-16	NA	66261266	66666060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66326647_66356643_66357256_66647537_66647792_66647951_66648116_66654710_66654789_66660218_66660361_66660443_66660507_66661897_66661988_66662995_66663221_66664310
ES.9487.192	chr13	+	3067	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686_66270479_66270563
ES.9487.193	chr13	+	3154	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269557_66269639
ES.9487.194	chr13	+	2900	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270464_66270547
ES.9487.195	chr13	+	2705	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	91.7234293951115	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTGTCACTGTACTCT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.196	chr13	+	2821	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	32400	multi-exon	FALSE	non_canonical	0	0	junction_5	53.8390193075617	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTCTTCCTCGG	NA	False	NA	NA	False	AATAAA	-29	NA	66261268	66358314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66328108_66358197
ES.9487.198	chr13	+	3071	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269625_66269707_66270292_66270374
ES.9487.199	chr13	+	3038	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	2300	multi-exon	FALSE	non_canonical	0	0	junction_4	57.4581586896065	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261268	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325525_66327512_66327599
ES.9487.2	chr13	+	4236	1	Intergenic	novelGene_7803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGCAAGGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	65457199	65461435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65457200_65461400
ES.9487.20	chr13	+	4997	5	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10259	965	intron_retention	FALSE	non_canonical	0	0	junction_3	10.2225241501304	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65651741	65663757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65658192_65658320_65658519_65660290_65660709_65661130_65661194
ES.9487.200	chr13	+	2849	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	6357	multi-exon	FALSE	non_canonical	0	0	junction_6	54.0102031177103	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAAGACGGTCTCTCGT	NA	False	NA	NA	False	NA	NA	NA	66261268	66332271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66325616_66325840_66327512_66327607_66327791_66331807
ES.9487.201	chr13	+	7122	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	5288	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAACAGTCATCAT	NA	False	NA	NA	False	AATAAA	-20	NA	66261268	66275938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269316
ES.9487.202	chr13	+	3289	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	2305	intron_retention	FALSE	non_canonical	0	0	junction_5	61.1640417238756	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66261268	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66316575_66316704_66325249_66327516_66327618
ES.9487.203	chr13	+	3016	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261268	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269492_66269712
ES.9487.204	chr13	+	6101	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-25	4333	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAATGTTGTATCTTGAA	NA	False	NA	NA	False	NA	NA	NA	66261268	66274983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269386_66269469_66273205_66273270
ES.9487.205	chr13	+	2810	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-22	1316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	66261271	66271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269434_66269686_66270241_66270408
ES.9487.206	chr13	+	3176	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-22	2300	intron_retention	FALSE	non_canonical	0	0	junction_4	54.5819338242976	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66261271	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327511_66327590
ES.9487.207	chr13	+	3499	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-19	1319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.44239744801	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261274	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66263982_66264140_66264730_66264842_66267450_66267578_66267777_66267839_66269026
ES.9487.208	chr13	+	1430	4	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-19	2301	multi-exon	FALSE	canonical	0	0	junction_1	12.3917535302941	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	2	True	AATAAA	-20	NA	66261274	66328215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66325249_66325393_66325840_66326525_66327712
ES.9487.209	chr13	+	4762	4	FSM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	-18	-3219	-18	2851	multi-exon	FALSE	canonical	3	113	junction_1	62.9620697104393	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGATGGAGTGTGAT	NA	False	NA	NA	False	NA	NA	NA	66261275	66273501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026
ES.9487.21	chr13	+	3865	6	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10252	945	intron_retention	FALSE	non_canonical	0	0	junction_3	9.68710483064987	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65651748	65663737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65658192_65658320_65658519_65658581_65659685_65660290_65660709_65661130_65661194
ES.9487.210	chr13	+	3196	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	-17	32407	intron_retention	FALSE	non_canonical	0	0	junction_4	57.4581586896065	505	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTCGGTTTATAA	NA	False	NA	NA	False	AATAAA	-36	NA	66261276	66358321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66325249_66327524_66327595_66328126_66358215
ES.9487.211	chr13	+	3055	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-16	1318	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66261277	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269635_66269721_66270250_66270334
ES.9487.212	chr13	+	1800	8	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	1525	4	NA	NA	-15	708	multi-exon	FALSE	canonical	0	0	junction_3	56.3628912512841	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	66261278	66345281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66334416_66334495_66340135_66340278_66341741_66341914_66343066_66343121_66344211
ES.9487.213	chr13	+	4320	4	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-4	1319	intron_retention	FALSE	non_canonical	0	0	junction_3	60.642852468824	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66261289	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66269233_66269316
ES.9487.214	chr13	+	3407	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-4	1594	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTTAATTTGAATATG	NA	False	NA	NA	False	NA	NA	NA	66261289	66272244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269316
ES.9487.215	chr13	+	4045	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-4	2230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	91.7234293951115	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCATAGCCTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	66261289	66272880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269233_66269314
ES.9487.217	chr13	+	2816	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-3	874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	103.781693954184	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTCACTGTACTCTTT	NA	False	NA	NA	False	NA	NA	NA	66261290	66271524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264008_66264140_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.218	chr13	+	3424	10	Fusion	ENSMUSG00000095909.3_ENSMUSG00000113350.3	novel	604	3	NA	NA	-3	712	intron_retention	FALSE	canonical	0	0	junction_2	10.1482833189159	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTTTTCTTCCACT	NA	False	NA	NA	False	AATAAA	-21	NA	66261290	66345285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66264730_66264842_66325249_66325393_66325840_66326525_66327712_66327791_66334416_66334495_66340135_66340278_66341741_66341914_66342262_66343121_66344211
ES.9487.219	chr13	+	3050	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-2	1321	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261291	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66267839_66269026_66269569_66269650_66270464_66270547
ES.9487.22	chr13	+	3730	7	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-10252	681	intron_retention	FALSE	non_canonical	0	0	junction_1	13.5574907543968	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTTGTCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	65651748	65663473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65651859_65655600_65655758_65658192_65658320_65658519_65658581_65659713_65660290_65660709_65661130_65661194
ES.9487.220	chr13	+	2988	9	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	5	2302	multi-exon	FALSE	non_canonical	0	0	junction_8	50.4603804979709	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261298	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66267450_66267578_66267777_66267839_66309197_66309325_66309508_66309570_66316575_66316704_66325249_66325393_66325840_66327516_66327626
ES.9487.221	chr13	+	3414	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	5	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	107.206284797114	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261298	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264889_66265095_66267450_66267578_66267777_66267839_66269026
ES.9487.222	chr13	+	3366	7	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	5	1321	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	97.6097672708355	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66261298	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66264008_66264140_66264730_66264842_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.223	chr13	+	4225	5	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	5	1317	intron_retention	TRUE	non_canonical	0	0	junction_3	63.966299721025	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66261298	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66261375_66267450_66267578_66267777_66269602_66269686_66270475_66270557
ES.9487.224	chr13	+	2486	4	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	6	2302	multi-exon	FALSE	non_canonical	0	0	junction_1	8.9566858950296	489	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66261299	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66261375_66325249_66325393_66325840_66327512_66327619
ES.9487.225	chr13	+	7325	3	NNC	ENSMUSG00000095909.3	novel	1815	4	NA	NA	-3004	1316	intron_retention	FALSE	canonical	0	0	junction_2	70	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	66264356	66271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66267578_66267777_66269602_66269686
ES.9487.226	chr13	+	4875	3	ISM	ENSMUSG00000095909.3	ENSMUST00000238623.2	1525	4	4412	-1686	-1655	1318	3prime_fragment	FALSE	canonical	3	140	junction_1	59	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66265705	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_66267578_66267777_66267839_66269026
ES.9487.227	chr13	+	3018	5	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	1525	4	NA	NA	192	6362	intron_retention	TRUE	non_canonical	0	0	junction_3	55.9732078766261	492	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	66267552	66332276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66267578_66267777_66267839_66325249_66327518_66327595_66327791_66331807
ES.9487.229	chr13	+	2110	3	NNC	ENSMUSG00000095909.3	novel	1815	4	NA	NA	2077	1317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66269437	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66269528_66269779_66269960_66270127
ES.9487.23	chr13	+	3573	7	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8743	681	intron_retention	TRUE	non_canonical	0	0	junction_4	13.2842847839928	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTTGTCCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	65651748	65663473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65659845_65660180_65660570_65660653_65661130_65661194
ES.9487.230	chr13	+	2240	2	NNC	ENSMUSG00000095909.3	novel	1815	4	NA	NA	2195	1313	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAACCTTGACTTAGC	NA	False	NA	NA	False	NA	NA	NA	66269555	66271963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66269653_66269820
ES.9487.231	chr13	+	1885	3	NNC	ENSMUSG00000095909.3	novel	1815	4	NA	NA	2305	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66269665	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66269677_66270012_66270460_66270542
ES.9487.232	chr13	+	1700	2	NNC	ENSMUSG00000095909.3	novel	1815	4	NA	NA	2405	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66269765	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66269821_66270324
ES.9487.233	chr13	+	7768	2	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	-4830	2299	intron_retention	TRUE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAACCTGGAAATAAAGT	8101	False	NA	0	True	AATAAA	-18	NA	66320330	66328213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66327528_66327642
ES.9487.234	chr13	+	5044	2	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	-2076	2317	intron_retention	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTCCTCGGTTTCTAA	NA	False	NA	18	True	AATAAA	-36	NA	66323084	66328231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66327516_66327618
ES.9487.235	chr13	+	4236	2	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	-1273	2301	intron_retention	FALSE	non_canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	2	True	AATAAA	-20	NA	66323887	66328215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66327512_66327603
ES.9487.236	chr13	+	3076	9	Fusion	ENSMUSG00000113156.2_ENSMUSG00000113350.3	novel	767	5	NA	NA	120	710	multi-exon	FALSE	canonical	0	0	junction_3	6.64736790015417	203	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66325280	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66325393_66325840_66326525_66331807_66332087_66334416_66334495_66340135_66340278_66341110_66341594_66341741_66341914_66343066_66343121_66344211
ES.9487.237	chr13	+	2701	2	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	245	2302	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	3	True	AATAAA	-21	NA	66325405	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66327529_66327638
ES.9487.238	chr13	+	1730	3	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	378	2300	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3.5	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66325538	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66326525_66327361_66327510_66327618
ES.9487.24	chr13	+	8874	6	Fusion	ENSMUSG00000113661.2_ENSMUSG00000113008.2	novel	327	2	NA	NA	-10245	4094	intron_retention	TRUE	non_canonical	0	0	junction_3	9.68710483064987	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTATATTACCTTC	NA	False	NA	NA	False	NA	NA	NA	65651755	65670320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65651859_65658192_65658320_65658519_65660290_65660709_65661130_65661194_65666557_65669228
ES.9487.240	chr13	+	2359	9	NNC	ENSMUSG00000113350.3	novel	767	5	NA	NA	-14034	710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4.96865172858795	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66326101	66345283	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66326525_66327361_66327512_66327619_66327791_66334416_66334495_66340135_66340278_66341496_66341594_66341741_66341914_66343066_66343121_66344211
ES.9487.241	chr13	+	4266	2	Intergenic	novelGene_7904	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTCGGTTTATAA	NA	False	NA	NA	False	AATAAA	-36	NA	66354000	66358321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66357493_66357547
ES.9487.242	chr13	+	2205	1	Intergenic	novelGene_7911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATCAAATTAATATCTT	NA	False	NA	NA	False	NA	NA	NA	66415853	66418058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66415900_66418100
ES.9487.243	chr13	+	364	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47306	125	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGCATGCCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	66439389	66599463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66439588_66453083_66453217_66599430
ES.9487.244	chr13	+	399	2	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47306	-4771	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGACTTTCCCTGGAT	NA	False	NA	NA	False	NA	NA	NA	66439389	66448456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66439588_66448255
ES.9487.245	chr13	+	577	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47307	-4289	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	66439390	66448938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66439588_66448255_66448445_66448747
ES.9487.246	chr13	+	552	4	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47307	125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.1705295048705	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGCATGCCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	66439390	66599463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66439588_66448255_66448445_66453083_66453217_66599430
ES.9487.247	chr13	+	503	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	47355	21	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	22.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTAGCATGCCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	66439438	66453248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66439588_66448255_66448445_66453083
ES.9487.248	chr13	+	1023	5	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	29.0215437218629	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTGTAGTCTCCAGT	NA	False	NA	NA	False	NA	NA	NA	66439535	66612327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66439588_66557624_66557828_66609950_66610037_66610237_66610441_66611848
ES.9487.249	chr13	+	1608	1	Intergenic	novelGene_7913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	2010	False	NA	NA	False	NA	NA	NA	66443380	66444988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66443400_66445000
ES.9487.25	chr13	+	1753	7	Intergenic	novelGene_7816	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	8.47381587925744	191	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGCAAATAATAAA	NA	False	NA	NA	False	AAAACA	-19	NA	65651758	65785429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65651859_65658192_65658320_65658519_65658581_65781730_65781809_65782072_65782115_65783887_65784959_65785155
ES.9487.250	chr13	+	4231	3	NNC	ENSMUSG00000114616.2	novel	463	3	NA	NA	52296	125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.5	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGCATGCCTTGGTTC	3009	False	NA	NA	False	NA	NA	NA	66444379	66599463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66448445_66453083_66453217_66599430
ES.9487.251	chr13	+	2958	2	Genic_Genomic	ENSMUSG00000114616.2	novel	360	3	NA	NA	58215	129	multi-exon	TRUE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGCCTTGGTTCCATT	8928	False	NA	NA	False	NA	NA	NA	66450298	66599467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66450415_66596625
ES.9487.252	chr13	+	722	4	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	32.5678778348646	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGTATAAAATATC	NA	False	NA	NA	False	NA	NA	NA	66460139	66610600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66460197_66608256_66608473_66609950_66610037_66610237
ES.9487.253	chr13	+	3621	3	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	35.5	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTATAAAATATCAGTC	NA	False	NA	NA	False	NA	NA	NA	66460635	66610604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66460867_66607013_66610037_66610237
ES.9487.254	chr13	+	1231	4	Antisense	novelGene_ENSMUSG00000114262.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	332	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66478447	66749192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66478482_66521161_66521427_66567773_66567880_66748366
ES.9487.255	chr13	+	1860	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	104.5	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTGGCTATCATTG	NA	False	NA	NA	False	NA	NA	NA	66550085	66784459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66550238_66782550_66782678_66782878
ES.9487.256	chr13	+	4450	3	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	35.5	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66557678	66610571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66558569_66606810_66610037_66610237
ES.9487.257	chr13	+	1029	2	Intergenic	novelGene_7916	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	100	False	NA	NA	False	NA	NA	NA	66589276	66594890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66589495_66594079
ES.9487.258	chr13	+	1642	2	Intergenic	novelGene_7917	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	130	False	NA	NA	False	NA	NA	NA	66589306	66594890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66589495_66593436
ES.9487.259	chr13	+	1249	5	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	26.5929971985107	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	154	False	NA	NA	False	NA	NA	NA	66589330	66620940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66589495_66609950_66610037_66610237_66610441_66615759_66615886_66620270
ES.9487.26	chr13	+	3986	5	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-8733	684	intron_retention	FALSE	non_canonical	0	0	junction_4	13.2923850380584	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTCCTGTGTTTACT	NA	False	NA	NA	False	NA	NA	NA	65651758	65663476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65651859_65658192_65658320_65658519_65658581_65659713_65661130_65661194
ES.9487.260	chr13	+	566	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	104.5	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	163	False	NA	NA	False	NA	NA	NA	66589339	66783162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66589495_66782550_66782678_66782878
ES.9487.261	chr13	+	5482	2	Intergenic	novelGene_7918	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGGTCATGAT	171	False	NA	NA	False	NA	NA	NA	66589347	66594891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66594000_66594061
ES.9487.262	chr13	+	2225	3	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	31	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGTATAAAATATC	236	False	NA	NA	False	NA	NA	NA	66589412	66610600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66589495_66608256_66610037_66610237
ES.9487.263	chr13	+	1786	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	104.5	391	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTGCTGGCTATCATT	239	False	NA	NA	False	NA	NA	NA	66589415	66784458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66589495_66782550_66782678_66782878
ES.9487.264	chr13	+	1961	4	Antisense	novelGene_ENSMUSG00000114343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	31.5629881700422	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	246	False	NA	NA	False	NA	NA	NA	66589422	66610571	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66589495_66608256_66609726_66609950_66610037_66610237
ES.9487.265	chr13	+	2523	1	Intergenic	novelGene_7919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	3191	False	NA	NA	False	NA	NA	NA	66592367	66594890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66592400_66594900
ES.9487.266	chr13	+	202	1	Intergenic	novelGene_7920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATCTGGCTGAATA	8606	False	NA	NA	False	NA	NA	NA	66597782	66597984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66597800_66598000
ES.9487.267	chr13	+	2801	2	Genic_Genomic	ENSMUSG00000114327.2	novel	818	2	NA	NA	-223050	-126	multi-exon	TRUE	canonical	0	0	junction_1	0	397	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTCGTCTGTTCATGA	NA	False	NA	NA	False	NA	NA	NA	66605967	66856895	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66606152_66854278
ES.9487.268	chr13	+	4338	2	Intergenic	novelGene_7921	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGGAGTATAAAATATC	NA	False	NA	NA	False	NA	NA	NA	66606061	66610600	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66610037_66610237
ES.9487.269	chr13	+	1228	4	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	89.3843138115159	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGGTAGACATTCTG	NA	False	NA	NA	False	NA	NA	NA	66606278	66783817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66606485_66782550_66782678_66782878_66783160_66783203
ES.9487.27	chr13	+	3882	4	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-2301	678	intron_retention	FALSE	non_canonical	0	0	junction_3	14.0554457615387	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCCTTTGTCCTGTG	NA	False	NA	NA	False	NA	NA	NA	65658190	65663470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65658320_65658519_65658581_65659713_65661130_65661194
ES.9487.270	chr13	+	1446	4	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	89.3843138115159	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGTAGAATACATCAT	NA	False	NA	NA	False	NA	NA	NA	66606294	66784049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66606485_66782550_66782678_66782878_66783162_66783203
ES.9487.271	chr13	+	571	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	80.5	365	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66606297	66783135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66606485_66782550_66782678_66782878
ES.9487.272	chr13	+	1416	4	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_3	89.3843138115159	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTGAGTTGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	66606298	66784021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66606485_66782550_66782678_66782878_66783197_66783236
ES.9487.273	chr13	+	4734	3	Intergenic	novelGene_7922	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	22	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACAGTCATCTCCAAAT	NA	False	NA	NA	False	NA	NA	NA	66606334	66612677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66610037_66610237_66610441_66611848
ES.9487.274	chr13	+	2350	3	Intergenic	novelGene_7923	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	24.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66606335	66612352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66606485_66609950_66610037_66610237
ES.9487.275	chr13	+	4050	3	Intergenic	novelGene_7925	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	34.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTTTCTAATTTTA	NA	False	NA	NA	False	NA	NA	NA	66606336	66611221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66610037_66610237_66610441_66611074
ES.9487.276	chr13	+	4269	1	Intergenic	novelGene_7924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTATAAAATATCAGTCG	NA	False	NA	NA	False	NA	NA	NA	66606336	66610605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66606300_66610600
ES.9487.277	chr13	+	5943	2	Intergenic	novelGene_7926	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGTTATCAATGTGGT	NA	False	NA	NA	False	NA	NA	NA	66606337	66612481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66610037_66610237
ES.9487.278	chr13	+	4431	3	Intergenic	novelGene_7927	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	22	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGGAGAGAAACCCTC	NA	False	NA	NA	False	NA	NA	NA	66606338	66612378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66610037_66610237_66610441_66611848
ES.9487.279	chr13	+	852	3	Intergenic	novelGene_7928	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	5.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCAGTTTGTCTATTAA	NA	False	NA	NA	False	NA	NA	NA	66606339	66609561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66606485_66608256_66608473_66609070
ES.9487.28	chr13	+	4836	5	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-3792	58145	intron_retention	FALSE	non_canonical	0	0	junction_2	10.8253175473055	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCCTGTATGTGCAAA	NA	False	NA	NA	False	NA	NA	NA	65658208	65720937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65658320_65658519_65660290_65660709_65661130_65661194_65663709_65720916
ES.9487.280	chr13	+	4792	3	Intergenic	novelGene_7931	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACGGTCTCTCATGTT	NA	False	NA	NA	False	NA	NA	NA	66636256	66652565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66636378_66645539_66645683_66648037
ES.9487.281	chr13	+	183	1	Intergenic	novelGene_7932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66648358	66648541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66648400_66648500
ES.9487.282	chr13	+	3106	4	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6360	1394	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	16.0069429380573	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66667682	66678802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
ES.9487.283	chr13	+	6566	5	Fusion	ENSMUSG00000114685.2_ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6336	6583	multi-exon	FALSE	non_canonical	0	0	junction_4	25.1035356075593	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGCAGCTTCGATACAA	NA	False	NA	NA	False	NA	NA	NA	66667706	66688869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027_66682270_66688852
ES.9487.284	chr13	+	6795	2	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6333	-2706	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTATAGTCTCATAAT	NA	False	NA	NA	False	NA	NA	NA	66667709	66674702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66674177_66674374
ES.9487.285	chr13	+	2674	6	Fusion	ENSMUSG00000114426.2_ENSMUSG00000114777.2	novel	1561	3	NA	NA	-6333	719	multi-exon	FALSE	canonical	1	3	junction_3	34.0035292285963	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	9	True	NA	NA	NA	66667709	66724694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66667826_66674049_66674177_66674374_66674436_66720982_66721110_66721308_66721370_66722512
ES.9487.286	chr13	+	564	3	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6326	-2706	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	19.5	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTATAGTCTCATAAT	NA	False	NA	NA	False	NA	NA	NA	66667716	66674702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66667826_66674049_66674177_66674374
ES.9487.287	chr13	+	10470	3	Fusion	ENSMUSG00000114685.2_ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6325	2323	intron_retention	FALSE	canonical	3	30	junction_2	19.5	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGGCTATGGTGG	NA	False	NA	NA	False	NA	NA	NA	66667717	66684609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66667826_66674049_66674177_66674374
ES.9487.288	chr13	+	3059	4	Fusion	ENSMUSG00000114685.2_ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6324	2322	multi-exon	FALSE	canonical	0	0	junction_3	28.2488937836511	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGGCTATGGTG	NA	False	NA	NA	False	NA	NA	NA	66667718	66684608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66667826_66674049_66674177_66674374_66674436_66681844
ES.9487.289	chr13	+	904	4	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6324	-772	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	16.0069429380573	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCTTATGAATGTA	NA	False	NA	NA	False	NA	NA	NA	66667718	66676636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
ES.9487.29	chr13	+	2450	3	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-536	-238	multi-exon	FALSE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	-2	True	NA	NA	NA	65659955	65662554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65660551_65660634_65661130_65661194
ES.9487.290	chr13	+	8874	4	Fusion	ENSMUSG00000114685.2_ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6324	2320	multi-exon	FALSE	canonical	3	30	junction_2	16.0069429380573	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTTCTTTGGCTATGG	NA	False	NA	NA	False	NA	NA	NA	66667718	66684606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
ES.9487.291	chr13	+	3657	4	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6323	1982	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	16.0069429380573	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACATTTGCCTTGGGC	NA	False	NA	NA	False	NA	NA	NA	66667719	66679390	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
ES.9487.292	chr13	+	8291	1	FSM	ENSMUSG00000114685.2	ENSMUST00000224365.2	198	1	-4173	-3920	-4173	3920	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCAGGGTCTTGATCAG	NA	False	NA	NA	False	AATAAA	-34	NA	66677915	66686206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66677900_66686200
ES.9487.293	chr13	+	4140	1	FSM	ENSMUSG00000114685.2	ENSMUST00000224365.2	198	1	-3968	26	-3968	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAATTTTATGAATACC	NA	False	NA	NA	False	NA	NA	NA	66678120	66682260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66678100_66682300
ES.9487.294	chr13	+	5195	1	FSM	ENSMUSG00000114685.2	ENSMUST00000224365.2	198	1	-1608	-3389	-1608	3389	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTCTTAGTTGTCC	NA	False	NA	NA	False	AGTAAA	-7	NA	66680480	66685675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_66680500_66685700
ES.9487.295	chr13	+	4498	1	Intergenic	novelGene_7933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTGTGTATAGGTTTC	1539	False	NA	NA	False	TATAAA	-17	NA	66682613	66687111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66682600_66687100
ES.9487.296	chr13	+	1634	1	Intergenic	novelGene_7934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATCGTGTAAATCTGT	3110	False	NA	NA	False	NA	NA	NA	66684184	66685818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66684200_66685800
ES.9487.297	chr13	+	1964	1	Intergenic	novelGene_7935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAGTCTGATCTAAGT	NA	False	NA	NA	False	NA	NA	NA	66694048	66696012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66694000_66696000
ES.9487.298	chr13	+	2964	1	Intergenic	novelGene_7936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATGTCTGTTTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	66694644	66697608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66694600_66697600
ES.9487.299	chr13	+	473	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9021	719	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	5524	False	NA	9	True	NA	NA	NA	66711963	66724694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
ES.9487.3	chr13	+	4227	2	Antisense	novelGene_ENSMUSG00000113709.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAGTAAGGCAACTTTG	NA	False	NA	NA	False	AATAGA	-9	NA	65457199	65602296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65461342_65602211
ES.9487.30	chr13	+	2033	3	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-368	-235	multi-exon	TRUE	non_canonical	0	0	junction_1	0	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	1	True	NA	NA	NA	65660123	65662557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65660132_65660467_65661130_65661194
ES.9487.300	chr13	+	2516	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9020	718	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8357739838062	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	5525	False	NA	8	True	NA	NA	NA	66711964	66724693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712112_66720982_66721110_66721308_66721370_66722512
ES.9487.301	chr13	+	3633	3	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9019	721	intron_retention	FALSE	canonical	3	96	junction_2	10	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5526	False	NA	11	True	NA	NA	NA	66711965	66724696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308
ES.9487.302	chr13	+	1418	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9015	-347	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAACCTCATGAATAT	5530	False	NA	NA	False	NA	NA	NA	66711969	66723628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ES.9487.303	chr13	+	753	5	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	20991	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	41.8090899207337	201	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTATAGTCTCATAA	5534	False	NA	NA	False	NA	NA	NA	66711973	66744966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638
ES.9487.304	chr13	+	4548	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	5882	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	50.1663898109747	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTCACCTGTGTCGTT	5534	False	NA	19	True	NA	NA	NA	66711973	66729857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66725607
ES.9487.305	chr13	+	3770	6	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	23894	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	46.2618633433631	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	5534	False	NA	NA	False	NA	NA	NA	66711973	66747869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66733905_66734020_66744311_66744439_66744638
ES.9487.306	chr13	+	595	6	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	21987	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	42.0361748973429	202	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTTATGAATGTAATCA	5534	False	NA	NA	False	NA	NA	NA	66711973	66745962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638_66744700_66745853
ES.9487.307	chr13	+	1476	6	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	22868	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	42.0361748973429	204	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTGTAGTCTCCATT	5534	False	NA	NA	False	NA	NA	NA	66711973	66746843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638_66744700_66745853
ES.9487.308	chr13	+	3655	5	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	23893	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	41.8090899207337	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	5534	False	NA	NA	False	NA	NA	NA	66711973	66747868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638
ES.9487.309	chr13	+	7643	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	5882	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTCACCTGTGTCGTT	5534	False	NA	19	True	NA	NA	NA	66711973	66729857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ES.9487.31	chr13	+	3198	3	Fusion	ENSMUSG00000063905.3_ENSMUSG00000113008.2	novel	327	2	NA	NA	-129	915	intron_retention	TRUE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65660362	65663707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_65660592_65660673_65661130_65661194
ES.9487.310	chr13	+	6117	3	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9004	3220	intron_retention	FALSE	canonical	3	96	junction_2	10	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	5541	False	NA	NA	False	NA	NA	NA	66711980	66727195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308
ES.9487.311	chr13	+	484	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9004	719	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.0469802502917	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	5541	False	NA	9	True	NA	NA	NA	66711980	66724694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712112_66720982_66721110_66721308_66721370_66724529
ES.9487.312	chr13	+	2494	6	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9004	23893	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	42.0361748973429	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	5541	False	NA	NA	False	NA	NA	NA	66711980	66747868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638_66744700_66745853
ES.9487.313	chr13	+	3672	5	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9000	23893	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	35.8216066083028	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	5545	False	NA	NA	False	NA	NA	NA	66711984	66747868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712112_66720982_66721110_66721308_66721370_66744311_66744439_66744638
ES.9487.314	chr13	+	5660	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9000	3910	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAGAAAGAAA	5545	False	NA	NA	False	NA	NA	NA	66711984	66727885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ES.9487.315	chr13	+	1996	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-8971	275	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTGTCACTGTACTCT	5574	False	NA	NA	False	NA	NA	NA	66712013	66724250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
ES.9487.316	chr13	+	7364	3	Antisense	novelGene_ENSMUSG00000114262.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	20	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTGTATAGTCTCAT	7376	False	NA	NA	False	NA	NA	NA	66737205	66744964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66743844_66744038_66744439_66744638
ES.9487.317	chr13	+	1502	5	Antisense	novelGene_ENSMUSG00000114262.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	2.6809513236909	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGCAAGTTTTCATTG	7391	False	NA	NA	False	NA	NA	NA	66737220	66742536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66737350_66738177_66738370_66740680_66740812_66741404_66741482_66741563
ES.9487.318	chr13	+	2026	1	Intergenic	novelGene_7943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAATAGATCCTTGGT	7400	False	NA	NA	False	AATAAA	-16	NA	66737229	66739255	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66737200_66739300
ES.9487.319	chr13	+	1338	2	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7403	False	NA	NA	False	NA	NA	NA	66737232	66906329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66737350_66905108
ES.9487.32	chr13	+	3045	1	Genic_Genomic	ENSMUSG00000113008.2	novel	NA	NA	NA	NA	-1170	1083	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGAAAGACTCACCA	NA	False	NA	NA	False	NA	NA	NA	65660830	65663875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65660800_65663900
ES.9487.320	chr13	+	3547	9	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_4	18.0238557195734	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCCTCTGAAGGAGTTT	7410	False	NA	NA	False	NA	NA	NA	66737239	66925464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66737350_66738177_66738370_66740680_66740812_66741404_66741482_66741563_66743843_66744037_66744439_66744638_66744700_66924718_66924862_66925311
ES.9487.321	chr13	+	3917	2	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGATAGAGAAACACAAGAAA	8451	False	NA	NA	False	NA	NA	NA	66738280	66891871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66742155_66891828
ES.9487.322	chr13	+	6222	3	Antisense	novelGene_ENSMUSG00000114262.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	18.5	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGCTGC	8929	False	NA	NA	False	NA	NA	NA	66738758	66767821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66744439_66744638_66744700_66767340
ES.9487.323	chr13	+	5701	3	Antisense	novelGene_ENSMUSG00000114262.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	19	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGGAAGAAAGGAA	9988	False	NA	NA	False	NA	NA	NA	66739817	66749218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66740812_66744311_66744439_66744638
ES.9487.324	chr13	+	6789	1	Intergenic	novelGene_7944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTAGCTCCATTATT	NA	False	NA	NA	False	NA	NA	NA	66741083	66747872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66741100_66747900
ES.9487.325	chr13	+	3137	2	Intergenic	novelGene_7945	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGTGTATAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	66741627	66744964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66744439_66744638
ES.9487.326	chr13	+	5922	2	Intergenic	novelGene_7946	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66741747	66747869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66744439_66744638
ES.9487.327	chr13	+	541	1	Intergenic	novelGene_7947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTGTGTATAGTCTCA	NA	False	NA	NA	False	NA	NA	NA	66744422	66744963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66744400_66745000
ES.9487.328	chr13	+	202	1	Intergenic	novelGene_7948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTGGCTGACTA	NA	False	NA	NA	False	NA	NA	NA	66766526	66766728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66766500_66766700
ES.9487.329	chr13	+	2119	4	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	98.0521403245346	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTGCTGGCTATCAT	NA	False	NA	NA	False	NA	NA	NA	66767673	66784457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66767871_66780893_66781110_66782550_66782678_66782878
ES.9487.33	chr13	+	8295	1	FSM	ENSMUSG00000113661.2	ENSMUST00000221061.2	239	1	-5113	-2943	-5113	2943	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTTTTGTGT	NA	False	NA	NA	False	NA	NA	NA	65660874	65669169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65660900_65669200
ES.9487.330	chr13	+	4190	3	Antisense	novelGene_ENSMUSG00000114814.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	100	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTCCCTGATGTCA	NA	False	NA	NA	False	NA	NA	NA	66767678	66786749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66767871_66782550_66782678_66782878
ES.9487.331	chr13	+	523	3	Intergenic	novelGene_7949	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	102.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66773575	66783137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66773713_66782550_66782678_66782878
ES.9487.332	chr13	+	1004	4	Intergenic	novelGene_7950	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	97.5943987463761	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATTGAAAGAAGCAATG	NA	False	NA	NA	False	NA	NA	NA	66773668	66783753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66773713_66782550_66782678_66782878_66783162_66783203
ES.9487.333	chr13	+	2504	4	Intergenic	novelGene_7951	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	97.8241051865825	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGGAGAGAAACCGTGT	NA	False	NA	NA	False	NA	NA	NA	66773893	66785008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66775039_66775113_66782550_66782678_66782878
ES.9487.334	chr13	+	1098	3	Intergenic	novelGene_7953	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTTCATTTCTTAT	NA	False	NA	NA	False	NA	NA	NA	66773895	66783677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ES.9487.335	chr13	+	591	3	Intergenic	novelGene_7952	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66773895	66783170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ES.9487.336	chr13	+	700	4	Intergenic	novelGene_7954	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	85.5608944943113	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGACAACGAAA	NA	False	NA	NA	False	NA	NA	NA	66773922	66783351	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878_66783159_66783203
ES.9487.337	chr13	+	2413	3	Intergenic	novelGene_7956	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCGTGTGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	66773922	66785019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ES.9487.338	chr13	+	1851	3	Intergenic	novelGene_7955	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTGCTGGCTATCAT	NA	False	NA	NA	False	NA	NA	NA	66773922	66784457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ES.9487.339	chr13	+	2041	4	Intergenic	novelGene_7958	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	95.5649866146941	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGGCTATCATTGCA	NA	False	NA	NA	False	NA	NA	NA	66773952	66784461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66780893_66781110_66782550_66782678_66782878
ES.9487.34	chr13	+	2484	2	NNC	ENSMUSG00000113008.2	novel	327	2	NA	NA	-743	136320	intron_retention	TRUE	non_canonical	0	0	junction_1	0	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	65661257	65799112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_65663518_65798888
ES.9487.340	chr13	+	1372	3	Intergenic	novelGene_7957	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	59	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAGTGTTATAAATCTC	NA	False	NA	NA	False	NA	NA	NA	66773952	66784008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66774068_66782550_66782678_66782878
ES.9487.341	chr13	+	501	3	Intergenic	novelGene_7959	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	103	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66775026	66783166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66775113_66782550_66782678_66782878
ES.9487.342	chr13	+	6172	1	Intergenic	novelGene_7960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66776994	66783166	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66777000_66783200
ES.9487.343	chr13	+	2193	1	Intergenic	novelGene_7962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCTTTTGGAGTGTCA	NA	False	NA	NA	False	AATATA	-14	NA	66785418	66787611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66785400_66787600
ES.9487.344	chr13	+	3009	1	Intergenic	novelGene_7963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAGGAAAGGAAAGG	NA	False	NA	NA	False	NA	NA	NA	66786064	66789073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66786100_66789100
ES.9487.345	chr13	+	168	1	Intergenic	novelGene_7970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66828104	66828272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66828100_66828300
ES.9487.346	chr13	+	5737	1	NIC	ENSMUSG00000114327.2	novel	818	2	NA	NA	115	-22152	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAGACTCAGAAATGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	66829132	66834869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_66829100_66834900
ES.9487.347	chr13	+	3544	1	Antisense	novelGene_ENSMUSG00000074830.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTACCCTGTTCAATGTT	NA	False	NA	NA	False	NA	NA	NA	66843667	66847211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66843700_66847200
ES.9487.348	chr13	+	6310	1	NIC	ENSMUSG00000114327.2	novel	818	2	NA	NA	21567	-127	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTCGTCTGTTCATG	NA	False	NA	NA	False	NA	NA	NA	66850584	66856894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_66850600_66856900
ES.9487.349	chr13	+	651	2	NNC	ENSMUSG00000114327.2	novel	818	2	NA	NA	25451	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTCGTCTGTTCATG	NA	False	NA	NA	False	NA	NA	NA	66854468	66856894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66854613_66856387
ES.9487.35	chr13	+	4753	2	Genic_Genomic	ENSMUSG00000113461.2	novel	239	1	NA	NA	-137483	2370	multi-exon	TRUE	canonical	0	0	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTAGTCTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	65663834	65803926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65663954_65799292
ES.9487.350	chr13	+	1637	5	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24330	473	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	16.2692194035239	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	66901174	66927679	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66924862_66925311_66925946_66926829_66927256_66927383
ES.9487.351	chr13	+	1375	2	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66901183	66906328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901313_66905082
ES.9487.352	chr13	+	2954	3	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24312	474	intron_retention	FALSE	canonical	3	24	junction_2	9	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66901192	66927680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66927256_66927383
ES.9487.353	chr13	+	2146	5	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24311	474	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	17.0202085768653	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66901193	66927680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66924862_66925311_66925946_66926302_66927256_66927383
ES.9487.354	chr13	+	2510	4	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24310	482	intron_retention	FALSE	canonical	3	24	junction_3	9.56846672960488	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTCTTCCTCGG	NA	False	NA	NA	False	AATAAA	-29	NA	66901194	66927688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66924862_66925311_66927256_66927383
ES.9487.355	chr13	+	8320	4	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24310	7602	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.8059820457696	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATTGCTTTGATATA	NA	False	NA	NA	False	ATTAAA	-22	NA	66901194	66934808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66924862_66925311_66925946_66927383
ES.9487.356	chr13	+	5134	1	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66901195	66906329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901200_66906300
ES.9487.357	chr13	+	8517	1	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	66901197	66909714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901200_66909700
ES.9487.358	chr13	+	1450	3	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66901197	66906329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901313_66904557_66904652_66905088
ES.9487.359	chr13	+	2299	4	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24306	709	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	15.1070255914995	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGACAGGTGGTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	66901198	66927915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66925946_66926829_66927256_66927383
ES.9487.36	chr13	+	2153	1	Intergenic	novelGene_7817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTGTAGTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	65669113	65671266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65669100_65671300
ES.9487.360	chr13	+	728	3	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCCAGAGTACTAATC	NA	False	NA	NA	False	NA	NA	NA	66901202	66905610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901313_66904557_66904654_66905088
ES.9487.361	chr13	+	362	3	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	2	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCAGTGTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	66901202	66925420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66901313_66924718_66924862_66925311
ES.9487.362	chr13	+	3086	2	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24301	489	intron_retention	FALSE	canonical	3	42	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTCGGTTTATAA	NA	False	NA	NA	False	AATAAA	-36	NA	66901203	66927695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718
ES.9487.363	chr13	+	2416	5	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-24277	474	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.0202085768653	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66901227	66927680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66901313_66924718_66925946_66926302_66926919_66927064_66927256_66927383
ES.9487.364	chr13	+	4680	1	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	66902894	66907574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66902900_66907600
ES.9487.365	chr13	+	2182	1	Intergenic	novelGene_7973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTCACTACGATGTT	110	False	NA	NA	False	NA	NA	NA	66905523	66907705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66905500_66907700
ES.9487.366	chr13	+	2829	2	NNC	ENSMUSG00000114226.2	novel	818	2	NA	NA	-787	468	intron_retention	FALSE	canonical	3	24	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCTGAAACCTGGAAATAA	6145	False	NA	NA	False	AATAAA	-15	NA	66924717	66927674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66927256_66927383
ES.9487.367	chr13	+	5694	1	Intergenic	novelGene_7974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATAGAATTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	66930026	66935720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66930000_66935700
ES.9487.37	chr13	+	740	2	Genic_Genomic	ENSMUSG00000113565.2	novel	544	1	NA	NA	-1356	241	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAAGAACAGCTTTT	1732	False	NA	NA	False	AATATA	-23	NA	65705625	65707766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65705820_65707220
ES.9487.38	chr13	+	3528	1	FSM	ENSMUSG00000113565.2	ENSMUST00000099421.4	544	1	-1309	-1675	-1309	1675	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGTGAATTTATATGT	1779	False	NA	NA	False	AATAAA	-12	NA	65705672	65709200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65705700_65709200
ES.9487.39	chr13	+	302	1	Intergenic	novelGene_7825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAACAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	65730721	65731023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65730700_65731000
ES.9487.4	chr13	+	175	1	Intergenic	novelGene_7804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAATGAAAG	7852	False	NA	NA	False	NA	NA	NA	65477722	65477897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65477700_65477900
ES.9487.40	chr13	+	1349	4	Intergenic	novelGene_7826	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTCGTTGTCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	65761607	66126175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65761693_66124549_66124622_66124759_66125063_66125286
ES.9487.41	chr13	+	2142	2	Intergenic	novelGene_7828	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGCAAATAATAAA	NA	False	NA	NA	False	AAAACA	-19	NA	65783090	65785429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65784959_65785155
ES.9487.42	chr13	+	173	1	Intergenic	novelGene_7829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGAC	NA	False	NA	NA	False	NA	NA	NA	65784968	65785141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65785000_65785100
ES.9487.43	chr13	+	865	4	Intergenic	novelGene_7830	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	53.2060982302676	56	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	65787562	65810654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65787705_65794023_65794151_65794350_65794412_65810119
ES.9487.44	chr13	+	1392	4	Genic_Genomic	ENSMUSG00000113870.2	novel	327	2	NA	NA	-9775	915	multi-exon	FALSE	canonical	0	0	junction_3	53.2060982302676	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAGAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65787596	65799078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_65787705_65794023_65794151_65794350_65794412_65797982
ES.9487.45	chr13	+	5602	1	FSM	ENSMUSG00000113461.2	ENSMUST00000221726.2	239	1	-2995	-2368	-2995	2368	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTGTAGTCTTCTCT	NA	False	NA	NA	False	NA	NA	NA	65798322	65803924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65798300_65803900
ES.9487.46	chr13	+	2885	1	FSM	ENSMUSG00000113461.2	ENSMUST00000221726.2	239	1	-1223	-1423	-1223	1423	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATTTATATTACCTACA	NA	False	NA	NA	False	NA	NA	NA	65800094	65802979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_65800100_65803000
ES.9487.47	chr13	+	4236	1	Intergenic	novelGene_7832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	65806422	65810658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65806400_65810700
ES.9487.48	chr13	+	2943	2	Intergenic	novelGene_7833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	65807169	66173278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65809730_66172895
ES.9487.49	chr13	+	2281	1	Intergenic	novelGene_7838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATTGTTGATGCTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	65830125	65832406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65830100_65832400
ES.9487.5	chr13	+	194	1	Intergenic	novelGene_7806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACTAGAGAATTCAC	NA	False	NA	NA	False	NA	NA	NA	65521803	65521997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65521800_65522000
ES.9487.50	chr13	+	1530	3	Antisense	novelGene_ENSMUSG00000113260.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	65847149	65859980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65847305_65848614_65849799_65859789
ES.9487.51	chr13	+	6185	2	Antisense	novelGene_ENSMUSG00000117836.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCTAGAGTTGAGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	65870613	65880513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65870729_65874443
ES.9487.52	chr13	+	2392	2	Antisense	novelGene_ENSMUSG00000117836.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAGAAAATATTA	NA	False	NA	NA	False	AAGAAA	-36	NA	65870613	65876717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65870733_65874444
ES.9487.53	chr13	+	182	1	Intergenic	novelGene_7841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATGTTAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	65883517	65883699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65883500_65883700
ES.9487.54	chr13	+	3406	1	Intergenic	novelGene_7842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTCGGGAGAGTCACT	NA	False	NA	NA	False	TTTAAA	-34	NA	65889340	65892746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65889300_65892700
ES.9487.55	chr13	+	1109	6	Antisense	novelGene_ENSMUSG00000113712.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACCAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	65896352	65964065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65896686_65954300_65954361_65954560_65954689_65957296_65957408_65960763_65961045_65963869
ES.9487.56	chr13	+	228	1	Intergenic	novelGene_7884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGAACCATATGGTTAT	NA	False	NA	NA	False	NA	NA	NA	66043574	66043802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66043600_66043800
ES.9487.57	chr13	+	2711	11	Genic_Genomic	ENSMUSG00000113723.3	novel	902	4	NA	NA	-46877	348	multi-exon	TRUE	non_canonical	0	0	junction_1	58.7214611534829	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTGAGATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	66044972	66096744	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66045092_66046579_66046764_66052247_66052375_66052573_66052635_66085377_66085456_66090898_66091041_66091167_66091188_66092580_66092671_66093678_66093765_66093849_66093904_66094994
ES.9487.58	chr13	+	957	5	Intergenic	novelGene_7885	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	16.4012194668567	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACTTACAGTGGCCA	NA	False	NA	5	True	AATAAA	-18	NA	66044981	66121104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66045092_66103844_66103972_66104163_66104225_66117637_66117781_66120588
ES.9487.59	chr13	+	2804	10	Genic_Genomic	ENSMUSG00000113723.3	novel	902	4	NA	NA	-46854	-325	multi-exon	FALSE	canonical	0	0	junction_3	59.3385349363722	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTTTTTCTTCCAC	NA	False	NA	NA	False	ACTAAA	-21	NA	66044995	66096071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66045092_66052247_66052375_66052573_66052635_66076322_66076466_66076915_66077599_66085377_66085456_66090898_66091041_66092498_66092671_66093678_66093904_66094994
ES.9487.6	chr13	+	194	1	Intergenic	novelGene_7808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACTAGAGAATTCAC	NA	False	NA	NA	False	NA	NA	NA	65588875	65589069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65588900_65589100
ES.9487.60	chr13	+	3407	7	Genic_Genomic	ENSMUSG00000113723.3	novel	902	4	NA	NA	-46842	205	multi-exon	FALSE	non_canonical	0	0	junction_3	70.8552907144006	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAACCAGTTTACTTTA	NA	False	NA	NA	False	AATAAA	-14	NA	66045007	66096601	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66045092_66052247_66052375_66052573_66052635_66090898_66091041_66091124_66091188_66092580_66093904_66094994
ES.9487.61	chr13	+	1141	2	Genic_Genomic	ENSMUSG00000114625.2	novel	682	1	NA	NA	-58	133431	multi-exon	TRUE	canonical	0	0	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCTCCATTATTTCTC	NA	False	NA	NA	False	NA	NA	NA	66055978	66190149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66056114_66189143
ES.9487.62	chr13	+	1725	2	Intergenic	novelGene_7886	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTCTTGTCATTAT	NA	False	NA	NA	False	AGTAAA	-16	NA	66062749	66073864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66064329_66073718
ES.9487.63	chr13	+	2770	2	Intergenic	novelGene_7887	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAATAGTAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	66063228	66075388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66064329_66073718
ES.9487.64	chr13	+	2669	1	Intergenic	novelGene_7888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAATAGTAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	66072719	66075388	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66072700_66075400
ES.9487.65	chr13	+	3745	5	Intergenic	novelGene_7890	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	20.2669681995112	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGGTTTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66098384	66123883	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66098504_66103844_66103972_66104163_66104225_66117637_66117781_66120588
ES.9487.66	chr13	+	457	4	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	-81636	-121	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	76.460592609672	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTGTCTCAGATATCAC	NA	False	NA	NA	False	NA	NA	NA	66098386	66187940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66098504_66186206_66186334_66186533_66186595_66187788
ES.9487.67	chr13	+	963	5	Intergenic	novelGene_7892	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	20.2669681995112	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTTACAGTGGCCAC	NA	False	NA	6	True	AATAAA	-19	NA	66098388	66121105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66098504_66103844_66103972_66104163_66104225_66117637_66117781_66120588
ES.9487.68	chr13	+	603	5	Intergenic	novelGene_7891	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	20.0919760103381	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGAAGGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	66098388	66118387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66098504_66103844_66103972_66104163_66104225_66117637_66117781_66118230
ES.9487.69	chr13	+	557	3	Intergenic	novelGene_7893	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_2	6	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTATAGTCTCATAAT	NA	False	NA	NA	False	NA	NA	NA	66098400	66104490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66098504_66103844_66103972_66104163
ES.9487.7	chr13	+	192	2	Antisense	novelGene_ENSMUSG00000113118.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTACTAGAGAATTCA	NA	False	NA	NA	False	NA	NA	NA	65588877	65732904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65589023_65732857
ES.9487.70	chr13	+	1484	4	Fusion	ENSMUSG00000113156.2_ENSMUSG00000113350.3	novel	306	2	NA	NA	-226756	708	multi-exon	FALSE	canonical	0	0	junction_1	0	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	66098404	66345281	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66098504_66325249_66325393_66341741_66341914_66344211
ES.9487.71	chr13	+	3063	6	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-162889	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	97.269933689707	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66098404	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66098504_66267450_66267578_66267777_66267839_66269026_66269625_66269707_66270241_66270324
ES.9487.72	chr13	+	2810	7	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-162886	1320	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	95.3736802733799	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	66098407	66271970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66098504_66267450_66267578_66267777_66267839_66269026_66269276_66269443_66269689_66269770_66270241_66270408
ES.9487.73	chr13	+	540	3	NNC	ENSMUSG00000113760.2	novel	569	4	NA	NA	-81604	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_1	37	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66098418	66186861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66098504_66186206_66186334_66186533
ES.9487.74	chr13	+	1430	1	Intergenic	novelGene_7894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	15	True	NA	NA	NA	66106630	66108060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66106600_66108100
ES.9487.75	chr13	+	1228	1	Intergenic	novelGene_7895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	1413	False	NA	NA	False	NA	NA	NA	66110257	66111485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66110300_66111500
ES.9487.76	chr13	+	1600	1	Intergenic	novelGene_7896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAATTCAGAGGTTTA	1621	False	NA	NA	False	AATAAA	-20	NA	66115071	66116671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66115100_66116700
ES.9487.77	chr13	+	1894	8	Fusion	ENSMUSG00000113156.2_ENSMUSG00000113760.2	novel	306	2	NA	NA	-61155	2302	multi-exon	FALSE	canonical	0	0	junction_1	47.1887222777231	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	5417	False	NA	3	True	AATAAA	-21	NA	66118867	66328216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66118973_66179803_66179943_66182764_66182896_66186206_66186334_66186533_66186595_66325249_66325393_66325840_66326525_66327712
ES.9487.78	chr13	+	3404	11	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	306	2	NA	NA	-130530	32392	multi-exon	TRUE	non_canonical	0	0	junction_1	42.6820805491016	564	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66130763	66358306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66130946_66168438_66168496_66169042_66169119_66250560_66250639_66261093_66261187_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327512_66327619_66328126_66358215
ES.9487.79	chr13	+	1285	1	Intergenic	novelGene_7898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATGTGCACGACTGT	NA	False	NA	NA	False	AATAAA	-22	NA	66158446	66159731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66158400_66159700
ES.9487.8	chr13	+	192	1	Intergenic	novelGene_7809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTTTTAAAAAT	2485	False	NA	NA	False	NA	NA	NA	65616392	65616584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_65616400_65616600
ES.9487.80	chr13	+	1351	1	Intergenic	novelGene_7899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATGGA	NA	False	NA	NA	False	AATAAA	-13	NA	66158495	66159846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66158500_66159800
ES.9487.81	chr13	+	5932	1	Intergenic	novelGene_7900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTGAGATTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	66167346	66173278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66167300_66173300
ES.9487.82	chr13	+	3173	4	NNC	ENSMUSG00000113156.2	novel	306	2	NA	NA	-149941	32397	intron_retention	TRUE	non_canonical	0	0	junction_1	0	525	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAAGTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-26	NA	66175219	66358311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66175523_66325249_66327535_66327636_66328162_66358251
ES.9487.83	chr13	+	572	3	ISM	ENSMUSG00000113760.2	ENSMUST00000221828.2	569	4	-11	1202	-11	-1202	5prime_fragment	FALSE	canonical	3	110	junction_1	16.5	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCTGTATAGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	66180011	66186859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_66180131_66186206_66186334_66186533
ES.9487.84	chr13	+	4754	2	Intergenic	novelGene_7901	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGCCCCAGTTAAATG	NA	False	NA	NA	False	NA	NA	NA	66188289	66193385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66188443_66188784
ES.9487.85	chr13	+	2239	2	Genic_Genomic	ENSMUSG00000095909.3	novel	1815	4	NA	NA	-72542	1914	multi-exon	TRUE	non_canonical	0	0	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCCTTGGTCACAGT	NA	False	NA	NA	False	NA	NA	NA	66188751	66272564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_66188772_66270345
ES.9487.86	chr13	+	548	1	Intergenic	novelGene_7902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCATCTCCTTCAGTTT	NA	False	NA	NA	False	NA	NA	NA	66194391	66194939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66194400_66194900
ES.9487.87	chr13	+	3284	6	NNC	ENSMUSG00000095909.3	novel	1525	4	NA	NA	-4760	1321	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	96.6527806118375	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66256533	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256616_66261221_66261375_66267450_66267578_66267777_66267839_66269026_66270200_66270283
ES.9487.88	chr13	+	3348	6	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4639	1319	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	101.268751350059	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66256654	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66269026_66269528_66269611
ES.9487.89	chr13	+	3346	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	306	2	NA	NA	-4635	2310	intron_retention	FALSE	non_canonical	0	0	junction_5	51.808879547815	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTCTTCCTCGG	NA	False	NA	11	True	AATAAA	-29	NA	66256658	66328224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66325249_66327509_66327622
ES.9487.9	chr13	+	4415	2	Antisense	novelGene_ENSMUSG00000114031.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATGAGAGGGAGATGC	NA	False	NA	NA	False	NA	NA	NA	65624665	65629336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_65625256_65625511
ES.9487.90	chr13	+	3416	8	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4635	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	94.2941554662962	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66256658	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66263982_66264140_66267450_66267578_66267777_66267839_66269026_66269555_66269639_66270464_66270547
ES.9487.91	chr13	+	3162	7	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4635	1316	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	99.5819037554292	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	66256658	66271966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66261093_66261187_66267450_66267578_66267777_66267839_66269026_66269602_66269686_66270296_66270379
ES.9487.92	chr13	+	2926	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	306	2	NA	NA	-4635	2300	multi-exon	FALSE	non_canonical	0	0	junction_6	48.0786392856074	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66256658	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66325249_66325393_66325840_66327511_66327586
ES.9487.93	chr13	+	3257	7	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4635	1317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	97.5780314528953	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66256658	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66269026_66269602_66269686_66270325_66270408
ES.9487.94	chr13	+	3258	7	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4635	1318	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	97.5780314528953	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	66256658	66271968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66269026_66269602_66269686_66270296_66270379
ES.9487.95	chr13	+	3375	6	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	306	2	NA	NA	-4631	2305	intron_retention	FALSE	non_canonical	0	0	junction_5	51.808879547815	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	6	True	AATAAA	-24	NA	66256662	66328219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66325249_66327511_66327586
ES.9487.96	chr13	+	3430	7	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4631	1317	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	98.7437761751764	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66256662	66271967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66261093_66261187_66267450_66267578_66267777_66267839_66269026_66269602_66269686
ES.9487.97	chr13	+	3419	5	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4624	1321	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	103.076124781639	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66256669	66271971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66269026
ES.9487.98	chr13	+	3219	7	Fusion	ENSMUSG00000113156.2_ENSMUSG00000095909.3	novel	306	2	NA	NA	-4605	2300	multi-exon	FALSE	non_canonical	0	0	junction_6	49.1813537385416	489	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	1	True	AATAAA	-19	NA	66256688	66328214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66325249_66325393_66325521_66327524_66327595
ES.9487.99	chr13	+	2557	6	NNC	ENSMUSG00000095909.3	novel	449	3	NA	NA	-4604	1319	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	101.268751350059	455	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66256689	66271969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_66256769_66258081_66258269_66267450_66267578_66267777_66267839_66269026_66269233_66270072
ES.9488.1	chr13	+	5737	1	Antisense	novelGene_ENSMUSG00000114353.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTATCACTTTGCATGT	2573	False	NA	NA	False	NA	NA	NA	66935977	66941714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66936000_66941700
ES.9489.1	chr13	+	3078	2	Antisense	novelGene_ENSMUSG00000117784.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTAGAAATTTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	66950775	66958851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_66950925_66955922
ES.949.1	chr1	-	177	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTTGCC	NA	False	NA	-17	True	NA	NA	NA	87365924	87365747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87365700_87365900
ES.9490.1	chr13	+	4077	1	Intergenic	novelGene_7976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66973994	66978071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_66974000_66978100
ES.9491.1	chr13	-	2639	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3364	25616	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.0377741060106	195	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	3917	False	NA	NA	False	AATAAA	-21	NA	65499775	65458419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65460633_65481017_65481146_65488362_65488424_65488791_65488919_65499665
ES.9491.10	chr13	-	6306	8	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	19	3051	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	33.8646766783711	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	7300	False	NA	-3	True	NA	NA	NA	65496392	65480984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65483024_65483065_65486229_65486397_65486756_65486838_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65496297
ES.9491.11	chr13	-	468	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-5	3051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.3666538560063	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	7276	False	NA	-3	True	NA	NA	NA	65496416	65480984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65481146_65488362_65488424_65488791_65488919_65496297
ES.9491.12	chr13	-	3244	2	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	12138	3049	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGTTGCCTTGGTCAT	545	False	NA	-5	True	NA	NA	NA	65484273	65480986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65483028_65483070
ES.9491.13	chr13	-	1398	1	Intergenic	novelGene_7805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAATAAAAAAAGA	1866	False	NA	NA	False	NA	NA	NA	65482952	65481554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65481600_65483000
ES.9491.14	chr13	-	4301	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	1228	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGATGGAGTGTGAT	7279	False	NA	NA	False	NA	NA	NA	65496413	65482807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.15	chr13	-	4539	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	1228	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	34.3252417649493	191	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGATGGAGTGTGAT	7275	False	NA	NA	False	NA	NA	NA	65496417	65482807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492402_65496297
ES.9491.16	chr13	-	4090	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	1017	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATTCACCAGGATGTT	7279	False	NA	NA	False	NA	NA	NA	65496413	65483018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.17	chr13	-	4067	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	7	1003	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.8834238750888	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAGAAAGA	7288	False	NA	NA	False	NA	NA	NA	65496404	65483032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486161_65486580_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.2	chr13	-	7388	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	7	3055	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	40.1777301499226	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	7288	False	NA	1	True	NA	NA	NA	65496404	65480980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65488424_65488791_65488919_65492244_65492376_65496297
ES.9491.20	chr13	-	3927	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3489	832	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	37.4123976777752	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGGAAAGAA	3792	False	NA	NA	False	NA	NA	NA	65499900	65483203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65499762
ES.9491.21	chr13	-	5204	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	5	832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.6672749351218	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGGAAAGAA	7286	False	NA	NA	False	NA	NA	NA	65496406	65483203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65488424_65488791_65488919_65496297
ES.9491.22	chr13	-	4168	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	3	832	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	34.0901582408895	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGGAAAGAA	7284	False	NA	NA	False	NA	NA	NA	65496408	65483203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491542_65491654_65492244_65492402_65496297
ES.9491.23	chr13	-	3918	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3403	832	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.8385267554346	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAGGAAAGAA	3878	False	NA	NA	False	NA	NA	NA	65499814	65483203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65499762
ES.9491.24	chr13	-	3935	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3335	812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	37.9336262437432	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	3946	False	NA	NA	False	NA	NA	NA	65499746	65483223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297_65496383_65499665
ES.9491.25	chr13	-	5023	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	812	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	34.1987654098149	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	7279	False	NA	NA	False	NA	NA	NA	65496413	65483223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65488424_65488791_65488919_65496297
ES.9491.27	chr13	-	5177	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-27	810	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	40.1777301499226	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAAGA	7254	False	NA	NA	False	NA	NA	NA	65496438	65483225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65488424_65488791_65488919_65492244_65492376_65496297
ES.9491.28	chr13	-	3619	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3336	580	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	37.1786228900426	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTGTCCTGTGTTTAC	3945	False	NA	NA	False	NA	NA	NA	65499747	65483455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65499665
ES.9491.29	chr13	-	3911	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	19	579	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36.412085905644	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGTCCTGTGTTTA	7300	False	NA	NA	False	NA	NA	NA	65496392	65483456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486612_65486862_65487225_65488362_65488424_65488791_65488919_65491542_65491654_65496297
ES.9491.3	chr13	-	6110	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	16	3055	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.8834238750888	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	7297	False	NA	1	True	NA	NA	NA	65496395	65480980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486161_65486580_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.30	chr13	-	3762	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3408	579	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	40.7085678942406	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGTCCTGTGTTTA	3873	False	NA	NA	False	NA	NA	NA	65499819	65483456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486588_65486838_65487225_65488362_65488424_65488791_65488919_65499762
ES.9491.31	chr13	-	3853	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	5	579	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	33.4198876253181	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGTCCTGTGTTTA	7286	False	NA	NA	False	NA	NA	NA	65496406	65483456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492376_65496297
ES.9491.32	chr13	-	3620	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	29	578	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTTTGTCCTGTGTTT	7310	False	NA	NA	False	NA	NA	NA	65496382	65483457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.33	chr13	-	3810	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	5	576	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3444071187386	189	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCCTTTGTCCTGTGT	7286	False	NA	NA	False	NA	NA	NA	65496406	65483459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.34	chr13	-	3327	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3364	260	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	37.1786228900426	187	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCACAGTTTG	3917	False	NA	NA	False	NA	NA	NA	65499775	65483775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65499665
ES.9491.35	chr13	-	3864	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	7	-338	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	34.1987654098149	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTAGCTCCATTATT	7288	False	NA	NA	False	NA	NA	NA	65496404	65484373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65488424_65488791_65488919_65496297
ES.9491.36	chr13	-	4044	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	-339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.6672749351218	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	7275	False	NA	NA	False	NA	NA	NA	65496417	65484374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65488424_65488791_65488919_65496297
ES.9491.37	chr13	-	2927	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-27	-339	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.3444071187386	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	7254	False	NA	NA	False	NA	NA	NA	65496438	65484374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.38	chr13	-	2732	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-2	-341	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7279	False	NA	NA	False	NA	NA	NA	65496413	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.39	chr13	-	2837	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3364	-341	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	36.9464477318185	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	3917	False	NA	NA	False	NA	NA	NA	65499775	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65498582_65498694_65499665
ES.9491.4	chr13	-	7302	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3490	3055	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.6976087896015	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	3791	False	NA	1	True	NA	NA	NA	65499901	65480980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486676_65487179_65488424_65488791_65488919_65499665
ES.9491.40	chr13	-	2979	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-7	-341	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	33.1582903995701	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7274	False	NA	NA	False	NA	NA	NA	65496418	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491542_65491654_65492244_65492376_65496297
ES.9491.41	chr13	-	2716	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	14	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.8834238750888	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7295	False	NA	NA	False	NA	NA	NA	65496397	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486161_65486580_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.42	chr13	-	3861	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	7	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	43.3666538560063	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7288	False	NA	NA	False	NA	NA	NA	65496404	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486161_65486580_65488424_65488791_65488919_65496297
ES.9491.43	chr13	-	2906	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-7	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.8834238750888	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7274	False	NA	NA	False	NA	NA	NA	65496418	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486588_65486838_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.44	chr13	-	2941	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3	-341	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	33.4198876253181	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7278	False	NA	NA	False	NA	NA	NA	65496414	65484376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492376_65496297
ES.9491.45	chr13	-	2968	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	-343	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	34.3252417649493	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	7275	False	NA	NA	False	NA	NA	NA	65496417	65484378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492402_65496297
ES.9491.46	chr13	-	3934	4	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3533	-344	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.9207369459982	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	3748	False	NA	NA	False	NA	NA	NA	65499944	65484379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486171_65486589_65488424_65488791_65488919_65499762
ES.9491.47	chr13	-	2934	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3505	-345	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.7639007325114	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAACCTTGACTTAGCTC	3776	False	NA	NA	False	NA	NA	NA	65499916	65484380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65487225_65488362_65488424_65488791_65488919_65499762
ES.9491.48	chr13	-	1889	7	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3	-1393	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	33.4198876253181	179	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAATATAATCAATGTG	7278	False	NA	NA	False	NA	NA	NA	65496414	65485428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492376_65496297
ES.9491.49	chr13	-	1675	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	-1402	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	178	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCTCATGAATATA	7275	False	NA	NA	False	NA	NA	NA	65496417	65485437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.5	chr13	-	6300	6	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-6	3055	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	41.3444071187386	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTTGGTCATGAAATC	7275	False	NA	1	True	NA	NA	NA	65496417	65480980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486229_65486397_65486756_65486838_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.6	chr13	-	6130	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-5	3054	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.8110558841335	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCCTTGGTCATGAAAT	7276	False	NA	0	True	NA	NA	NA	65496416	65480981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
ES.9491.7	chr13	-	6132	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3474	3052	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	37.4123976777752	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCCTTGGTCATGAA	3807	False	NA	-2	True	NA	NA	NA	65499885	65480983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65499762
ES.9491.8	chr13	-	6102	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3348	3051	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	37.1786228900426	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	3933	False	NA	-3	True	NA	NA	NA	65499759	65480984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65499665
ES.9491.9	chr13	-	6487	8	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	-3315	3051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	33.0923260109701	194	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTGCCTTGGTCATGA	3966	False	NA	-3	True	NA	NA	NA	65499726	65480984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65491576_65491654_65492244_65492376_65498483_65498694_65499665
ES.9492.1	chr13	-	3185	1	NIC	ENSMUSG00000113145.2	novel	2316	5	NA	NA	7171	-816	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACCCACTGCCTCCAA	NA	False	NA	NA	False	GATAAA	-14	NA	65505070	65501885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_65501900_65505100
ES.9492.2	chr13	-	10422	4	NNC	ENSMUSG00000113145.2	novel	2316	5	NA	NA	-50713	-1067	intron_retention	FALSE	canonical	2	2	junction_1	15.4560308258262	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-17	NA	65562954	65502136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65512252_65548013_65548075_65548274_65548402_65562835
ES.9492.3	chr13	-	4612	9	Genic_Genomic	ENSMUSG00000113551.2	novel	597	1	NA	NA	-46394	3358	multi-exon	FALSE	non_canonical	0	0	junction_1	13.3082446250435	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTCTTATATATTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	65562954	65512605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65513759_65514613_65516972_65527040_65527187_65527667_65527761_65528785_65529198_65529646_65529790_65548013_65548075_65548274_65548402_65562835
ES.9492.4	chr13	-	2864	4	Antisense	novelGene_ENSMUSG00000113388.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	15.4560308258262	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGTTTCTTCCTCGT	NA	False	NA	NA	False	AATAAA	-29	NA	65562955	65527233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65529790_65548013_65548075_65548274_65548402_65562835
ES.9492.5	chr13	-	2393	5	Antisense	novelGene_ENSMUSG00000113388.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	14.0245320777557	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	65562941	65527241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65529198_65529646_65529790_65548013_65548075_65548274_65548402_65562835
ES.9492.6	chr13	-	2439	6	Antisense	novelGene_ENSMUSG00000113388.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	13.0782261794175	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	65562937	65527241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65529198_65529646_65529790_65546787_65546838_65548013_65548075_65548274_65548402_65562835
ES.9492.7	chr13	-	3517	1	Antisense	novelGene_ENSMUSG00000112935.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGGAAATAAAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	65530759	65527242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65527200_65530800
ES.9492.8	chr13	-	6634	2	Antisense	novelGene_ENSMUSG00000112935.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAAACCTGGAAATAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	65534327	65527244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65529198_65529646
ES.9493.1	chr13	-	222	1	Intergenic	novelGene_7807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAGTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	65573447	65573225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65573200_65573400
ES.9494.1	chr13	-	5160	5	Genic_Genomic	ENSMUSG00000114031.2_ENSMUSG00000113135.2	novel	478	3	NA	NA	-18	2616	multi-exon	TRUE	non_canonical	0	0	junction_1	91.870493086736	222	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTTTCTCTGGAGTTA	NA	False	NA	-1	True	NA	NA	NA	65768075	65623582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65625254_65625509_65628768_65628968_65629055_65632525_65632595_65767999
ES.9494.10	chr13	-	4662	3	Intergenic	novelGene_7811	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	112	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGTGCTGGCTATCAT	NA	False	NA	NA	False	NA	NA	NA	65632820	65627144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65627894_65628706_65628768_65628968
ES.9494.11	chr13	-	3073	2	Intergenic	novelGene_7812	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	224	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTTGTTCCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	65630848	65627574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65628768_65628968
ES.9494.12	chr13	-	4459	3	Intergenic	novelGene_7813	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	112	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTGTTATAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	65633064	65627591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65627894_65628706_65628768_65628968
ES.9494.13	chr13	-	4881	3	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	112	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65650600	65628403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65628768_65628968_65633154_65650268
ES.9494.14	chr13	-	4260	1	Intergenic	novelGene_7814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	65632663	65628403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65628400_65632700
ES.9494.15	chr13	-	2263	3	Intergenic	novelGene_7815	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	101.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65632669	65628433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65628768_65628968_65630754_65632525
ES.9494.16	chr13	-	578	3	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-7055	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	204	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGCCTTCGTTCCATTA	NA	False	NA	NA	False	NA	NA	NA	65651662	65639603	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65639775_65644415_65644605_65651444
ES.9494.17	chr13	-	320	2	NNC	ENSMUSG00000113955.2	novel	364	2	NA	NA	-6989	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATGCCTTCGTTCCA	NA	False	NA	NA	False	NA	NA	NA	65651596	65639606	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65639775_65651444
ES.9494.18	chr13	-	159	1	Intergenic	novelGene_7818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAACAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	65669687	65669528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65669500_65669700
ES.9494.19	chr13	-	4585	1	Intergenic	novelGene_7819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGATGTCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65679655	65675070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65675100_65679700
ES.9494.20	chr13	-	671	4	Intergenic	novelGene_7820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.7408643620842	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAGAGGAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	65705524	65675079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65675444_65697380_65697442_65697641_65697769_65705405
ES.9494.21	chr13	-	3456	1	Intergenic	novelGene_7821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTATGGAAGTTTCTTA	NA	False	NA	NA	False	AAGAAA	-2	NA	65680879	65677423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65677400_65680900
ES.9494.22	chr13	-	2479	5	Antisense	novelGene_ENSMUSG00000113565.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	7.98044484975618	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCAGTCTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	65710864	65678212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65680171_65697380_65697442_65697641_65697769_65709416_65709627_65710741
ES.9494.23	chr13	-	5178	1	Intergenic	novelGene_7822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAAGCAGTCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	65683392	65678214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65678200_65683400
ES.9494.24	chr13	-	1115	1	Intergenic	novelGene_7823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGGCGAGAGAGCC	NA	False	NA	NA	False	AATAAA	-11	NA	65680024	65678909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65678900_65680000
ES.9494.25	chr13	-	1785	1	Intergenic	novelGene_7824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	7370	False	NA	NA	False	NA	NA	NA	65691845	65690060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65690100_65691800
ES.9494.26	chr13	-	3193	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.7408643620842	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	2	True	NA	NA	NA	65705524	65693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65696269_65697380_65697442_65697641_65697769_65705405
ES.9494.27	chr13	-	3187	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	22.1560124771785	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	2	True	NA	NA	NA	65705546	65693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65705405
ES.9494.28	chr13	-	7935	4	Antisense	novelGene_ENSMUSG00000113461.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	2	True	NA	NA	NA	65831117	65693382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65694788_65695207_65695665_65695752_65695954_65825245
ES.9494.29	chr13	-	7753	3	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_2	8	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	0	True	NA	NA	NA	65705523	65693384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65697442_65697641_65701220_65705405
ES.9494.3	chr13	-	3070	1	FSM	ENSMUSG00000114031.2	ENSMUST00000221462.2	908	1	-1223	-939	-1223	939	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGTGGCATAAACCAG	NA	False	NA	NA	False	NA	NA	NA	65628329	65625259	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65625300_65628300
ES.9494.30	chr13	-	3225	5	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	8.27647267862342	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-1	True	NA	NA	NA	65705510	65693385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65696241_65697380_65697442_65697641_65697769_65700416_65700494_65705405
ES.9494.31	chr13	-	3899	6	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-13	4684	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	102.955135860238	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGTTTCTCTCCAGT	NA	False	NA	NA	False	NA	NA	NA	65768070	65758953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761787_65762285_65763699_65763903_65764103_65764190_65765670_65765887_65767930
ES.9494.32	chr13	-	1659	5	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	10	2337	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	107.769139831401	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTCACTGTACTCAAC	NA	False	NA	NA	False	NA	NA	NA	65768047	65761300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761449_65761954_65763060_65763699_65763903_65764103_65764190_65767930
ES.9494.33	chr13	-	1526	6	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-24	2337	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	105.714710423857	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTCACTGTACTCAAC	NA	False	NA	NA	False	NA	NA	NA	65768081	65761300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761786_65762285_65763699_65763903_65764103_65764190_65765629_65765887_65768009
ES.9494.34	chr13	-	1228	5	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-347	2335	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	113.816464099005	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGTCACTGTACTCA	NA	False	NA	NA	False	NA	NA	NA	65768404	65761302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761786_65762285_65763699_65763903_65764103_65764190_65768371
ES.9494.35	chr13	-	1420	6	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-19274	2263	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.714710423857	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCATCTCCAAATACATGA	NA	False	NA	NA	False	NA	NA	NA	65787331	65761374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761787_65762285_65763699_65763903_65764103_65764190_65765629_65765887_65787290
ES.9494.36	chr13	-	1517	6	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-13	2261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.408045666989	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCATCTCCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	65768070	65761376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761787_65762285_65763699_65763903_65764103_65764190_65765629_65765887_65767930
ES.9494.37	chr13	-	1483	6	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-19380	2261	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	104.344429654869	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCATCTCCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	65787437	65761376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761711_65761787_65762285_65763699_65763903_65764103_65764190_65765670_65765887_65787290
ES.9494.38	chr13	-	1822	4	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	3938	2256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	124.408824267234	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCACAGTCATCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	65764119	65761381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65761723_65761797_65763060_65763699_65763903_65764103
ES.9494.39	chr13	-	1739	4	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-46	1855	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	106.013625958595	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGTTGTATCA	NA	False	NA	NA	False	NA	NA	NA	65768103	65761782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65763060_65763699_65763903_65764103_65764190_65767930
ES.9494.4	chr13	-	2712	3	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5567	-91	multi-exon	FALSE	canonical	3	95	junction_2	64.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTCATCTCCAAATAC	NA	False	NA	NA	False	NA	NA	NA	65632673	65626289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65628768_65628968_65629055_65632525
ES.9494.40	chr13	-	1144	5	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-10	1855	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	108.804871214482	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAGTTGTATCA	NA	False	NA	NA	False	NA	NA	NA	65768067	65761782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65762285_65763699_65763903_65764103_65764190_65765670_65765887_65767930
ES.9494.41	chr13	-	790	4	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-18	1709	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	100.433504812333	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACTTTATGAATGTAA	NA	False	NA	NA	False	NA	NA	NA	65768075	65761928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65762285_65763699_65763903_65764103_65764190_65767930
ES.9494.42	chr13	-	942	5	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-9	1654	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	108.804871214482	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTTTTCACAAAGTT	NA	False	NA	NA	False	NA	NA	NA	65768066	65761983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65762285_65763699_65763903_65764103_65764190_65765670_65765887_65767930
ES.9494.43	chr13	-	591	3	FSM	ENSMUSG00000113135.2	ENSMUST00000220469.2	478	3	-20	-93	-20	93	multi-exon	FALSE	canonical	3	102	junction_2	85	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	65768077	65763544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_65763903_65764103_65764190_65767930
ES.9494.44	chr13	-	4060	3	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-18	93	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	136	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	65768075	65763544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65763903_65764103_65767481_65767750
ES.9494.45	chr13	-	781	4	NNC	ENSMUSG00000113135.2	novel	478	3	NA	NA	-18	69	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	120.949025075305	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65768075	65763568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65763903_65764103_65764190_65765670_65765887_65767930
ES.9494.46	chr13	-	5147	2	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTCGTTCCATTATTT	NA	False	NA	NA	False	NA	NA	NA	65787432	65775220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65780226_65787290
ES.9494.47	chr13	-	822	2	Intergenic	novelGene_7827	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	65787429	65779542	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65780226_65787290
ES.9494.48	chr13	-	198	1	Intergenic	novelGene_7831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTATTCTGTTATG	NA	False	NA	NA	False	NA	NA	NA	65802346	65802148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65802100_65802300
ES.9494.49	chr13	-	6434	3	Intergenic	novelGene_7834	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATTAATATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	65827281	65807721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65808114_65808680_65813454_65826012
ES.9494.5	chr13	-	1102	5	Fusion	ENSMUSG00000114031.2_ENSMUSG00000113135.2	novel	478	3	NA	NA	-19416	-289	multi-exon	TRUE	non_canonical	0	0	junction_1	113.816464099005	225	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTTATCAATATGGT	NA	False	NA	NA	False	NA	NA	NA	65787473	65626487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_65626622_65761787_65762285_65763699_65763903_65764103_65764190_65787291
ES.9494.50	chr13	-	4628	1	Intergenic	novelGene_7835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAGATGTCTACATTA	5326	False	NA	NA	False	NA	NA	NA	65812369	65807741	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65807700_65812400
ES.9494.51	chr13	-	3249	5	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-6195	27342	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.656383221335	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTTATAGATTTGGG	1635	False	NA	NA	False	AAGAAA	-12	NA	65847005	65810084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65812832_65813271_65813471_65840427_65840489_65840688_65840816_65846890
ES.9494.52	chr13	-	8851	2	Intergenic	novelGene_7836	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTATGGAAGTTTCTTA	NA	False	NA	NA	False	AAGAAA	-2	NA	65831504	65810094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65813454_65826012
ES.9494.53	chr13	-	3670	4	NNC	ENSMUSG00000113260.2	novel	1038	6	NA	NA	-6186	27332	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.2624538467705	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTATGGAAGTTTCTTA	1644	False	NA	NA	False	AAGAAA	-2	NA	65846996	65810094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65813471_65840427_65840489_65840688_65840816_65846890
ES.9494.54	chr13	-	7553	1	Intergenic	novelGene_7837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTGCTCTAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	65834262	65826709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65826700_65834300
ES.9494.55	chr13	-	3566	1	Intergenic	novelGene_7839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATCTCCTTCAGTTTT	NA	False	NA	NA	False	NA	NA	NA	65835742	65832176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65832200_65835700
ES.9494.56	chr13	-	5425	2	NNC	ENSMUSG00000113260.2	novel	1995	3	NA	NA	1828	4374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACTTAGGAACAGTCAT	9658	False	NA	NA	False	AATAAA	-17	NA	65838982	65833052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65838332_65838836
ES.9494.57	chr13	-	2007	1	Intergenic	novelGene_7840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAATGTCGTATCTTG	NA	False	NA	NA	False	NA	NA	NA	65836014	65834007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65834000_65836000
ES.9494.58	chr13	-	1212	1	Genic_Genomic	ENSMUSG00000113260.2	novel	NA	NA	NA	NA	2624	452	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	65838186	65836974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65837000_65838200
ES.9494.6	chr13	-	2685	4	Genic_Genomic	ENSMUSG00000114031.2	novel	908	1	NA	NA	-5564	-290	multi-exon	FALSE	canonical	0	0	junction_3	101.009350502262	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGTTATCAATATGG	NA	False	NA	NA	False	NA	NA	NA	65632670	65626488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65627120_65628564_65628768_65628968_65630754_65632604
ES.9494.7	chr13	-	4538	4	Genic_Genomic	ENSMUSG00000114031.2_ENSMUSG00000113135.2	novel	478	3	NA	NA	-20	-290	multi-exon	TRUE	non_canonical	0	0	junction_3	101.009350502262	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGTTATCAATATGG	NA	False	NA	NA	False	NA	NA	NA	65768077	65626488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65627120_65628564_65628768_65628968_65632469_65767873
ES.9494.8	chr13	-	1851	3	Intergenic	novelGene_7810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	64.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTGGCTATCATTG	NA	False	NA	NA	False	NA	NA	NA	65632665	65627142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65628768_65628968_65629055_65632525
ES.9494.9	chr13	-	2099	4	Antisense	novelGene_ENSMUSG00000113618.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_3	104.894656150296	111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGCTGGCTATCATTG	NA	False	NA	NA	False	NA	NA	NA	65651575	65627142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_65628768_65628968_65629055_65630496_65630754_65651444
ES.9495.1	chr13	-	2614	8	NNC	ENSMUSG00000117836.2	novel	2317	5	NA	NA	-13548	-1089	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	4.43547848464572	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	1537	False	NA	NA	False	AATAAA	-17	NA	65895378	65876695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_65877765_65878855_65878910_65880062_65880153_65881552_65881616_65881698_65881841_65887513_65887592_65894176_65894328_65894411
ES.9495.10	chr13	-	3354	7	Intergenic	novelGene_7850	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	30.8945338566909	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	65960870	65893750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894304_65894366_65896686_65912507_65912569_65912752_65912880_65954300_65954362_65954561_65954689_65960764
ES.9495.11	chr13	-	4353	5	Intergenic	novelGene_7851	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	8.03118920210451	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	65955988	65893752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894320_65894386_65896686_65912507_65912569_65912752_65912920_65954729
ES.9495.12	chr13	-	964	4	Intergenic	novelGene_7852	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	33.6286914537109	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCAGTGTCTATTGT	NA	False	NA	NA	False	NA	NA	NA	65960840	65895985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65896686_65954300_65954362_65954561_65954689_65960764
ES.9495.13	chr13	-	4131	7	Genic_Genomic	ENSMUSG00000113712.2	novel	1289	1	NA	NA	-50547	1429	multi-exon	TRUE	non_canonical	0	0	junction_1	31.8154399973067	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATAATCTTAGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	65960874	65907609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65910273_65910356_65911339_65912507_65912569_65912752_65912880_65954300_65954362_65954561_65954689_65960764
ES.9495.14	chr13	-	3847	2	Genic_Genomic	ENSMUSG00000113712.2	novel	1289	1	NA	NA	-1213	1429	multi-exon	TRUE	non_canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATAATCTTAGAATGGAA	NA	False	NA	NA	False	NA	NA	NA	65911540	65907609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65910282_65910365
ES.9495.15	chr13	-	3018	7	Genic_Genomic	ENSMUSG00000113712.2	novel	1289	1	NA	NA	-50558	305	multi-exon	FALSE	non_canonical	0	0	junction_1	31.8154399973067	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960885	65908733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65910282_65910365_65911339_65912507_65912569_65912752_65912880_65954300_65954362_65954561_65954689_65960764
ES.9495.16	chr13	-	4361	1	Intergenic	novelGene_7853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTTTCTTTGGCTATGG	5798	False	NA	NA	False	NA	NA	NA	65944528	65940167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65940200_65944500
ES.9495.17	chr13	-	2164	1	Intergenic	novelGene_7854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATACTTAGGAACAGT	1909	False	NA	NA	False	AATAAA	-14	NA	65948417	65946253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65946300_65948400
ES.9495.18	chr13	-	3493	6	Intergenic	novelGene_7855	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTGCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	65960870	65949589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952428_65952679_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.19	chr13	-	3691	6	Intergenic	novelGene_7856	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAACAGTTGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	65960904	65949592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952489_65952573_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.2	chr13	-	4039	1	Genic_Genomic	ENSMUSG00000117836.2	novel	NA	NA	NA	NA	-3210	-5395	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATATTTATAGTATAATC	NA	False	NA	NA	False	TTTAAA	-5	NA	65885040	65881001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_65881000_65885000
ES.9495.20	chr13	-	2907	6	Intergenic	novelGene_7858	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960874	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952428_65952679_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.21	chr13	-	3392	7	Intergenic	novelGene_7859	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	77.624452046733	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960875	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952154_65952237_65953125_65954300_65954362_65954561_65954689_65957297_65957409_65958009_65958131_65960764
ES.9495.22	chr13	-	3165	5	Intergenic	novelGene_7860	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	83.0523178484502	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960879	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952444_65952526_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.23	chr13	-	3350	6	Intergenic	novelGene_7862	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	81.2172395492484	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65965484	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952823_65952906_65953125_65954300_65954362_65954561_65954689_65963870_65964058_65965370
ES.9495.24	chr13	-	3262	6	Intergenic	novelGene_7857	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	79.5638108690126	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960867	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952465_65952549_65953125_65954300_65954362_65954561_65954689_65957297_65957409_65960764
ES.9495.25	chr13	-	3083	6	Intergenic	novelGene_7861	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65960883	65950179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951815_65951898_65952465_65952549_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.26	chr13	-	3037	6	Intergenic	novelGene_7863	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	65960840	65950181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951815_65951898_65952428_65952513_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.28	chr13	-	2789	7	Intergenic	novelGene_7864	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	77.4218243707089	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	65960849	65950181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951983_65952150_65952490_65952825_65953125_65954300_65954362_65954561_65954689_65957331_65957409_65960764
ES.9495.29	chr13	-	4237	5	Intergenic	novelGene_7865	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	39.1024295920343	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	65960863	65950181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951815_65951898_65952465_65952549_65954362_65954561_65954689_65960764
ES.9495.3	chr13	-	5663	6	Intergenic	novelGene_7845	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_5	29.2889057494472	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	65960891	65889732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894255_65895411_65896095_65896542_65896686_65954300_65954362_65954561_65954689_65960764
ES.9495.30	chr13	-	2904	6	Intergenic	novelGene_7866	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	65960874	65950181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952465_65952717_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.31	chr13	-	3260	4	Intergenic	novelGene_7867	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	80.0347146902865	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	65960893	65950181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.33	chr13	-	3071	6	Intergenic	novelGene_7869	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	65960872	65950182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952444_65952526_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.34	chr13	-	3156	5	Intergenic	novelGene_7870	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	83.0523178484502	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	65960874	65950182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951868_65951951_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.35	chr13	-	3287	6	Intergenic	novelGene_7871	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	65961088	65950182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951669_65952465_65952549_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.36	chr13	-	6079	3	Intergenic	novelGene_7868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	47	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	65956546	65950182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952465_65952549_65954362_65954561
ES.9495.37	chr13	-	6522	6	Intergenic	novelGene_7872	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	37.6	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	NA	False	NA	NA	NA	65962906	65950182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952465_65952549_65954362_65954561_65955085_65957493_65959144_65962567
ES.9495.39	chr13	-	4252	5	Intergenic	novelGene_7874	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	39.1024295920343	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	65960880	65950183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952465_65952549_65954362_65954561_65954689_65960764
ES.9495.4	chr13	-	5891	7	Intergenic	novelGene_7844	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	31.9947912427424	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	NA	False	NA	NA	False	NA	NA	NA	65960863	65889732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894348_65894411_65894575_65895411_65896095_65896542_65896686_65954300_65954362_65954561_65954689_65960764
ES.9495.40	chr13	-	3350	5	Intergenic	novelGene_7873	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_3	81.1953662470956	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	65960874	65950183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65953125_65954300_65954362_65954561_65954689_65957297_65957409_65960764
ES.9495.41	chr13	-	3346	6	Intergenic	novelGene_7875	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	81.2172395492484	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	65965484	65950183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952434_65952517_65953125_65954300_65954362_65954561_65954689_65963870_65964058_65965370
ES.9495.42	chr13	-	3153	5	Intergenic	novelGene_7876	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	83.0523178484502	131	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	NA	False	NA	NA	NA	65960874	65950184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952465_65952549_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.44	chr13	-	2895	6	Intergenic	novelGene_7877	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	81.2172395492484	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTCACTGTACTCTTT	NA	False	NA	NA	False	NA	NA	NA	65965476	65950626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952061_65952144_65953125_65954300_65954362_65954561_65954689_65963870_65964058_65965370
ES.9495.45	chr13	-	2774	4	Intergenic	novelGene_7878	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	80.0347146902865	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTTGCGTGTCACTG	NA	False	NA	NA	False	NA	NA	NA	65960860	65950634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.46	chr13	-	2087	5	Intergenic	novelGene_7879	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	83.0523178484502	127	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCTCATGAACATA	NA	False	NA	NA	False	NA	NA	NA	65960874	65951251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65952482_65952565_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.47	chr13	-	1866	6	Intergenic	novelGene_7880	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	80.7653391003839	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCTCATGAACATA	NA	False	NA	NA	False	NA	NA	NA	65960905	65951251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65951588_65951671_65952360_65952611_65953125_65954300_65954362_65954561_65954689_65960764
ES.9495.5	chr13	-	5551	2	Intergenic	novelGene_7843	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACGGTCTCTCGTGTTCC	1571	False	NA	NA	False	NA	NA	NA	65895344	65889732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894365_65894425
ES.9495.6	chr13	-	3374	7	Intergenic	novelGene_7846	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	30.8945338566909	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	65960874	65893747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894293_65894342_65896686_65912507_65912569_65912752_65912880_65954300_65954362_65954561_65954689_65960764
ES.9495.7	chr13	-	1229	2	Intergenic	novelGene_7847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1854	False	NA	NA	False	AATAAA	-21	NA	65895061	65893750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894344_65894425
ES.9495.8	chr13	-	1439	2	Intergenic	novelGene_7849	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1650	False	NA	NA	False	AATAAA	-21	NA	65895265	65893750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894336_65894411
ES.9495.9	chr13	-	1445	2	Intergenic	novelGene_7848	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1656	False	NA	NA	False	AATAAA	-21	NA	65895259	65893750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65894348_65894411
ES.9496.1	chr13	-	5572	1	Intergenic	novelGene_7881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGACCATGTTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	66001982	65996410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_65996400_66002000
ES.9497.1	chr13	-	236	1	Intergenic	novelGene_7882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGAGTTACAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	66007686	66007450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66007400_66007700
ES.9498.1	chr13	-	194	1	Intergenic	novelGene_7883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACTAGAGAATTCAC	9370	False	NA	NA	False	NA	NA	NA	66018117	66017923	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66017900_66018100
ES.9499.1	chr13	-	1165	1	Antisense	novelGene_ENSMUSG00000113945.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTTTTGTTTAAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	66036938	66035773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66035800_66036900
ES.95.1	chr1	-	1618	4	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.5801861245835	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTCCATTGTGTCCATG	NA	False	NA	NA	False	NA	NA	NA	11465715	11421213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11422441_11423545_11423731_11457012_11457110_11465606
ES.95.2	chr1	-	2459	4	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	32.7651576458218	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTCTTTGGATTTTAT	NA	False	NA	NA	False	CATAAA	-13	NA	11460170	11454291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11456468_11457012_11457110_11459153_11459268_11460098
ES.95.3	chr1	-	2403	3	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTCTTTGGATTTT	NA	False	NA	NA	False	CATAAA	-11	NA	11465738	11454293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11456468_11457012_11457110_11465606
ES.95.5	chr1	-	752	3	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_2	32	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTATCTCTTATTCCA	NA	False	NA	NA	False	NA	NA	NA	11471466	11456085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11456468_11457012_11457110_11471193
ES.95.6	chr1	-	574	3	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATGATAATAAA	NA	False	NA	NA	False	NA	NA	NA	11465745	11456129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11456468_11457012_11457110_11465606
ES.95.7	chr1	-	4513	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAGAAAAAAAAGTCATTT	NA	False	NA	NA	False	NA	NA	NA	11461685	11457172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11457200_11461700
ES.950.1	chr1	-	595	1	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87371330	87370735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87370700_87371300
ES.9500.1	chr13	-	3836	1	Intergenic	novelGene_7889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTGTGCTCTCATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	66084312	66080476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66080500_66084300
ES.9500.2	chr13	-	967	4	Antisense	novelGene_ENSMUSG00000113723.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	1.63299316185545	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTCG	NA	False	NA	NA	False	NA	NA	NA	66098162	66081915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66082703_66083473_66083541_66083892_66083934_66098090
ES.9501.1	chr13	-	2683	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8289	-79	intron_retention	FALSE	canonical	3	49	junction_2	59.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCATCTCCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	66138894	66124235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66126651_66126851_66126979_66138753
ES.9501.10	chr13	-	4909	2	Intergenic	novelGene_7897	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	66150148	66144995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66148086_66148329
ES.9501.100	chr13	-	3436	3	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	1741	1340	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAGAGTGAAAGGAA	8841	False	NA	NA	False	NA	NA	NA	66580215	66576610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66579656_66579739_66580072_66580156
ES.9501.101	chr13	-	3904	5	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	0	1090	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	58.7920062593547	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTCCTGTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	66589179	66576860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66581867_66587616_66587804_66589080
ES.9501.102	chr13	-	4921	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-20	10692	-20	1086	5prime_fragment	FALSE	canonical	3	147	junction_1	23	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTTTGTCCTGTGTT	NA	False	NA	NA	False	NA	NA	NA	66589199	66576864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66581540_66581739_66581867_66589080
ES.9501.103	chr13	-	3732	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-60	-1085	-20	1085	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCCTTTGTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	66589199	66576865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ES.9501.104	chr13	-	3097	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-61	-449	-21	449	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTAATTTGAATATGC	NA	False	NA	NA	False	NA	NA	NA	66589200	66577501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ES.9501.105	chr13	-	4261	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-7	11339	-7	439	5prime_fragment	FALSE	canonical	3	147	junction_1	23	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATAAACTGTGTTAAT	NA	False	NA	NA	False	NA	NA	NA	66589186	66577511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66581540_66581739_66581867_66589080
ES.9501.106	chr13	-	9924	3	NNC	ENSMUSG00000074832.12	novel	515	5	NA	NA	0	172	intron_retention	FALSE	canonical	3	14	junction_2	66.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589179	66577778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66581540_66581739_66587804_66589080
ES.9501.107	chr13	-	4028	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-41	11606	-41	172	5prime_fragment	FALSE	canonical	3	147	junction_1	23	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589220	66577778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66581540_66581739_66581867_66589080
ES.9501.108	chr13	-	2840	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-81	-172	-41	172	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589220	66577778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ES.9501.109	chr13	-	5756	7	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	0	172	intron_retention	FALSE	canonical	0	0	junction_5	55.0878086936363	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	0	True	NA	NA	NA	66589179	66577778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66584414_66584495_66584572_66585181_66585329_66587616_66587804_66589080
ES.9501.11	chr13	-	3606	4	Antisense	novelGene_ENSMUSG00000055763.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGCTGCGT	NA	False	NA	NA	False	NA	NA	NA	66256527	66144995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66148086_66148329_66148609_66153056_66153121_66256354
ES.9501.110	chr13	-	3000	5	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-15	171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	58.7920062593547	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	NA	False	NA	-1	True	NA	NA	NA	66589194	66577779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66581867_66587616_66587804_66589080
ES.9501.111	chr13	-	5461	5	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-41	170	intron_retention	FALSE	canonical	3	8	junction_4	57.9196641910155	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589220	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66584414_66584495_66584572_66589080
ES.9501.112	chr13	-	5559	6	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	8	170	intron_retention	FALSE	canonical	1	1	junction_4	58.0020689286167	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589171	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66584414_66584495_66584572_66585181_66585329_66589080
ES.9501.113	chr13	-	588	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-11	170	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	71.3411210702184	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589190	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66578071_66581478_66581540_66581739_66581867_66589080
ES.9501.114	chr13	-	5095	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-2392	170	intron_retention	TRUE	non_canonical	0	0	junction_1	60.301096360035	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	4708	False	NA	-2	True	NA	NA	NA	66584348	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66579538_66579622_66580291_66581478_66581540_66581739
ES.9501.115	chr13	-	2385	4	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-11	170	intron_retention	FALSE	non_canonical	0	0	junction_1	82.3097132110718	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589190	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66578587_66580197_66581540_66581739_66581867_66589080
ES.9501.116	chr13	-	3018	6	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-5	170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.5652673059024	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-2	True	NA	NA	NA	66589184	66577780	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66581867_66584273_66584414_66584495_66584572_66589080
ES.9501.117	chr13	-	5607	6	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-31	169	intron_retention	FALSE	canonical	2	4	junction_5	57.1930065654884	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-3	True	NA	NA	NA	66589210	66577781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66584414_66584495_66584572_66585171_66585329_66589080
ES.9501.118	chr13	-	10028	3	ISM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-58	-169	-18	169	intron_retention	FALSE	canonical	3	86	junction_1	30.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-3	True	NA	NA	NA	66589197	66577781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66580291_66581478_66581540_66581739
ES.9501.119	chr13	-	5592	6	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	14	169	intron_retention	FALSE	canonical	0	0	junction_4	56.729533754474	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-3	True	NA	NA	NA	66589165	66577781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66584414_66584495_66584572_66587616_66587804_66589080
ES.9501.12	chr13	-	1660	4	Antisense	novelGene_ENSMUSG00000055763.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	66175295	66144997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66145525_66145881_66146546_66148326_66148609_66175108
ES.9501.120	chr13	-	2848	5	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	-14	168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	60.3090996450784	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	-4	True	NA	NA	NA	66589193	66577782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66580291_66581478_66581540_66581739_66581867_66584532_66584572_66589080
ES.9501.121	chr13	-	2175	3	NNC	ENSMUSG00000074832.12	novel	2587	4	NA	NA	1741	167	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	8841	False	NA	-5	True	NA	NA	NA	66580215	66577783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66579656_66579739_66579973_66580145
ES.9501.122	chr13	-	539	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-56	2104	-16	-2104	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGTCTCAGATATCAT	NA	False	NA	NA	False	NA	NA	NA	66589195	66580054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ES.9501.123	chr13	-	675	1	Intergenic	novelGene_7915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCATGATGTCCTTGT	4789	False	NA	NA	False	NA	NA	NA	66584267	66583592	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66583600_66584300
ES.9501.124	chr13	-	1330	7	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-24	226142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.0439164354782	429	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCATTCATATGTGTA	NA	False	NA	NA	False	ATTAAA	-14	NA	66846331	66591849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66592702_66596347_66596390_66757351_66757430_66758251_66758312_66821007_66821069_66821267_66821395_66846221
ES.9501.125	chr13	-	2470	1	Intergenic	novelGene_7929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66620972	66618502	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66618500_66621000
ES.9501.126	chr13	-	466	2	Intergenic	novelGene_7930	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATCAAGGACTGGTTG	NA	False	NA	NA	False	NA	NA	NA	66636172	66635565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66635823_66635963
ES.9501.127	chr13	-	4514	6	Fusion	ENSMUSG00000074830.5_ENSMUSG00000097483.3	novel	1519	4	NA	NA	-13	3245	multi-exon	FALSE	canonical	0	0	junction_3	26.460536653666	424	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AATAAA	-37	NA	66846320	66647978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66652035_66652807_66652875_66653161_66653268_66700460_66700522_66700722_66700848_66846221
ES.9501.128	chr13	-	2472	2	ISM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	13486	-9	13122	3	intron_retention	FALSE	canonical	3	64	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTGTTTTTCTTGAGG	NA	False	NA	NA	False	NA	NA	NA	66654465	66651220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66652035_66652807
ES.9501.129	chr13	-	2762	2	Fusion	ENSMUSG00000097483.3_ENSMUSG00000114434.2	novel	1094	3	NA	NA	1499	-1	multi-exon	TRUE	non_canonical	0	0	junction_1	0	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGAACTGTTTTTCTT	514	False	NA	NA	False	NA	NA	NA	66697785	66651224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66651398_66695196
ES.9501.13	chr13	-	3695	4	Antisense	novelGene_ENSMUSG00000113477.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	66351420	66144999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66148086_66148329_66148609_66167716_66167892_66351265
ES.9501.130	chr13	-	7460	3	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12569	2761	multi-exon	FALSE	canonical	3	10	junction_2	5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTTTCTCTCGAGTTAT	NA	False	NA	NA	False	NA	NA	NA	66711853	66695015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722_66702494_66711670
ES.9501.131	chr13	-	695	4	Intergenic	novelGene_7938	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	8.80656320908194	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	66711867	66695018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66695372_66700460_66700522_66700722_66700807_66711670
ES.9501.132	chr13	-	900	5	Intergenic	novelGene_7937	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7.3824115301167	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGGTTTCTCTCGAGT	NA	False	NA	NA	False	NA	NA	NA	66711798	66695018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66695422_66696155_66696380_66700460_66700522_66700722_66700807_66711670
ES.9501.133	chr13	-	565	5	Intergenic	novelGene_7939	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.1239034243875	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTGTCTTTTGGAAA	NA	False	NA	NA	False	TTTAAA	-18	NA	66711752	66696253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66696380_66700460_66700522_66700722_66700807_66702281_66702494_66711670
ES.9501.134	chr13	-	7365	2	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-6549	-491	multi-exon	FALSE	canonical	3	20	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACCGTGTGAATGTAA	NA	False	NA	NA	False	NA	NA	NA	66705833	66698267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722
ES.9501.135	chr13	-	2502	3	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12583	-524	multi-exon	FALSE	canonical	2	3	junction_2	8.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66711867	66698300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722_66700807_66711670
ES.9501.136	chr13	-	4514	4	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12689	-524	multi-exon	FALSE	canonical	0	0	junction_2	8.80656320908194	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66711973	66698300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722_66702494_66710599_66710819_66711670
ES.9501.137	chr13	-	2569	4	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12438	-524	multi-exon	FALSE	canonical	0	0	junction_2	8.16496580927726	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	66711722	66698300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722_66700807_66702281_66702494_66711670
ES.9501.138	chr13	-	3342	3	Genic_Genomic	ENSMUSG00000114434.2	novel	1508	1	NA	NA	-12458	-1246	multi-exon	FALSE	canonical	3	10	junction_2	5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTTATAAATATCAGTC	NA	False	NA	NA	False	NA	NA	NA	66711742	66699022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66700522_66700722_66702494_66711670
ES.9501.139	chr13	-	3941	3	Genic_Genomic	ENSMUSG00000114839.2_ENSMUSG00000114434.2	novel	1153	3	NA	NA	-3442	-1246	multi-exon	TRUE	non_canonical	0	0	junction_1	101	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTTATAAATATCAGTC	NA	False	NA	NA	False	NA	NA	NA	66892819	66699022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66699053_66888707_66889043_66889243
ES.9501.14	chr13	-	518	3	Antisense	novelGene_ENSMUSG00000113760.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCTTTGGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	66256509	66159926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66160111_66167712_66167892_66256354
ES.9501.140	chr13	-	3496	1	FSM	ENSMUSG00000114434.2	ENSMUST00000224388.2	1508	1	-3267	1279	-3267	-1279	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66702551	66699055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66699100_66702600
ES.9501.141	chr13	-	2763	2	Intergenic	novelGene_7940	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAGAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	66703146	66700182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66700522_66700722
ES.9501.142	chr13	-	4226	3	Intergenic	novelGene_7941	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	64	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACTCAGTTTGTGTA	8641	False	NA	NA	False	NA	NA	NA	66736216	66701192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66704954_66711092_66711212_66735870
ES.9501.143	chr13	-	181	1	Intergenic	novelGene_7942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66728364	66728183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66728200_66728400
ES.9501.144	chr13	-	3199	1	Intergenic	novelGene_7961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66785545	66782346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66782300_66785500
ES.9501.145	chr13	-	5866	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	48	34615	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	95.7264621489563	271	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTCGTTGTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	66821345	66783376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66788961_66791808_66791952_66821007_66821069_66821267
ES.9501.146	chr13	-	3329	6	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7482	32329	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	87.0204573649208	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGGTTTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66828875	66785662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66788478_66791808_66791952_66821007_66821069_66821267_66821395_66824028_66824106_66828769
ES.9501.147	chr13	-	6583	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7482	32329	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	77.9800544298918	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCGGTTTGTGGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	66828875	66785662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66791952_66821007_66821069_66821267_66821395_66828769
ES.9501.148	chr13	-	3801	6	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7472	32328	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	84.6475043932188	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTCGGTTTGTGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	66828865	66785663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66788961_66791808_66791952_66821007_66821069_66821267_66821395_66824028_66824106_66828769
ES.9501.149	chr13	-	3735	5	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7486	32325	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	86.4566365295343	269	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGATGTCGGTTTGTGGTC	NA	False	NA	NA	False	NA	NA	NA	66828879	66785666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66788961_66791808_66791952_66821007_66821069_66821267_66821395_66828769
ES.9501.15	chr13	-	2890	5	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-8	288712	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	16.6038399173203	397	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGTGCAAGCTGACA	NA	False	NA	NA	False	AATAAA	-16	NA	66549940	66210265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66212709_66213158_66213302_66384209_66384271_66384471_66384599_66549824
ES.9501.150	chr13	-	3590	8	Fusion	ENSMUSG00000114549.2_ENSMUSG00000074830.5	novel	1562	3	NA	NA	-14	32323	multi-exon	FALSE	canonical	1	1	junction_1	75.7320733822567	349	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGATGTCGGTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	66846321	66785668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66788478_66791808_66791952_66821007_66821069_66821267_66821395_66832180_66832305_66833395_66833450_66834628_66834801_66846221
ES.9501.151	chr13	-	3811	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7493	29546	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	77.9800544298918	266	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACTTACAGTGGCCA	NA	False	NA	NA	False	AATAAA	-18	NA	66828886	66788445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66791952_66821007_66821069_66821267_66821395_66828769
ES.9501.152	chr13	-	608	6	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7482	26726	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	85.4508045602849	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTCAGGACATTGAAT	NA	False	NA	NA	False	NA	NA	NA	66828875	66791265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66791360_66791808_66791952_66821007_66821069_66821267_66821395_66824028_66824106_66828769
ES.9501.153	chr13	-	521	5	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7478	26720	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	88.3809227152557	262	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGATACAAGAAGTCAGGACA	NA	False	NA	NA	False	NA	NA	NA	66828871	66791271	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66791360_66791808_66791952_66821007_66821069_66821267_66821395_66828769
ES.9501.154	chr13	-	1241	1	Intergenic	novelGene_7964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAACGTGGCCATGCTTA	8859	False	NA	NA	False	AATAAA	-13	NA	66793714	66792473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66792500_66793700
ES.9501.155	chr13	-	8592	1	Intergenic	novelGene_7965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCAGAGGTTTAGT	1066	False	NA	NA	False	AATAAA	-22	NA	66801507	66792915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66792900_66801500
ES.9501.156	chr13	-	6488	1	Intergenic	novelGene_7966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAACAT	2130	False	NA	NA	False	AATAAA	-18	NA	66800443	66793955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66794000_66800400
ES.9501.157	chr13	-	6745	1	Intergenic	novelGene_7967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATAATAGTAATTCAGA	NA	False	NA	NA	False	NA	NA	NA	66805087	66798342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66798300_66805100
ES.9501.158	chr13	-	5693	1	Intergenic	novelGene_7968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTTGTCTTGTCA	NA	False	NA	NA	False	AGTAAA	-12	NA	66805561	66799868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66799900_66805600
ES.9501.159	chr13	-	2878	2	Antisense	novelGene_ENSMUSG00000114314.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTTGTCTTGTCA	NA	False	NA	NA	False	AGTAAA	-12	NA	66992842	66799868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66800006_66990101
ES.9501.16	chr13	-	2886	6	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-2	288526	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17.2348484182484	397	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCGGTGGCCACAGGGA	NA	False	NA	NA	False	AATAAA	-24	NA	66549934	66210451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66212709_66213158_66213302_66384209_66384271_66384471_66384599_66390346_66390535_66549824
ES.9501.160	chr13	-	2031	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7476	6080	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.8377795881109	244	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATATTACCTTCATCT	NA	False	NA	NA	False	NA	NA	NA	66828869	66811911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66813655_66821007_66821069_66821267_66821395_66828769
ES.9501.161	chr13	-	5377	1	Genic_Genomic	ENSMUSG00000074830.5	novel	NA	NA	NA	NA	2598	4573	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCTTGGTCATGAAA	NA	False	NA	NA	False	NA	NA	NA	66818795	66813418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66813400_66818800
ES.9501.162	chr13	-	532	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7486	4571	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.8377795881109	243	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	66828879	66813420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66813655_66821007_66821069_66821267_66821395_66828769
ES.9501.163	chr13	-	1829	1	Intergenic	novelGene_7969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTGCCTTGGTCAC	NA	False	NA	NA	False	NA	NA	NA	66817921	66816092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66816100_66817900
ES.9501.164	chr13	-	1248	2	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	2872	1307	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66818521	66816684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66817652_66818240
ES.9501.165	chr13	-	1669	5	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7485	1307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	99.2128393908772	238	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66828878	66816684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66817067_66819332_66819455_66820139_66821069_66821267_66821395_66828769
ES.9501.166	chr13	-	1394	2	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	4127	181030	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	597	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66998808	66816684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66816739_66997468
ES.9501.167	chr13	-	1622	2	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	3003	1307	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66818390	66816684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66818148_66818231
ES.9501.168	chr13	-	474	4	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	-7496	1306	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	85.7956227839678	238	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-2	True	NA	NA	NA	66828889	66816685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66816852_66821007_66821069_66821267_66821395_66828769
ES.9501.169	chr13	-	1508	2	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	3032	1306	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-2	True	NA	NA	NA	66818361	66816685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66818148_66818315
ES.9501.17	chr13	-	179	1	Intergenic	novelGene_7903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTCCTAGCATAAAACA	NA	False	NA	NA	False	NA	NA	NA	66338456	66338277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66338300_66338500
ES.9501.170	chr13	-	1907	2	NNC	ENSMUSG00000074830.5	novel	1562	3	NA	NA	2715	1305	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	-3	True	NA	NA	NA	66818678	66816686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66818240_66818324
ES.9501.171	chr13	-	2120	3	Fusion	ENSMUSG00000074830.5_ENSMUSG00000114353.2	novel	1562	3	NA	NA	2137	1305	multi-exon	TRUE	non_canonical	0	0	junction_1	0	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	-3	True	NA	NA	NA	66940951	66816686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66818288_66818459_66818914_66940886
ES.9501.172	chr13	-	564	3	NNC	ENSMUSG00000074830.5	novel	894	4	NA	NA	-7491	-1912	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_2	39	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACCACTCTGTATAGTC	NA	False	NA	NA	False	NA	NA	NA	66828884	66820746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66821069_66821267_66821395_66828769
ES.9501.173	chr13	-	5217	1	Genic_Genomic	ENSMUSG00000114549.2	novel	NA	NA	NA	NA	651	354	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTGAGATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	66835765	66830548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66830500_66835800
ES.9501.174	chr13	-	2906	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9924	354	intron_retention	FALSE	non_canonical	0	0	junction_1	18.0599003319509	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTGAGATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	66846340	66830548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832758_66833434_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.175	chr13	-	2061	4	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9884	354	intron_retention	FALSE	canonical	3	9	junction_3	19.1543438647449	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTGAGATTCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	66846300	66830548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66846221
ES.9501.176	chr13	-	3173	3	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	88	352	intron_retention	FALSE	non_canonical	0	0	junction_2	27	146	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66836328	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66834723_66836236
ES.9501.177	chr13	-	2788	8	Fusion	ENSMUSG00000114839.2_ENSMUSG00000114549.2	novel	1621	5	NA	NA	-11650	352	intron_retention	FALSE	canonical	0	0	junction_5	61.3228325823128	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	4319	False	NA	NA	False	AATAAA	-17	NA	66901027	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66832305_66833395_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66888839_66889043_66889243_66889330_66900899
ES.9501.178	chr13	-	2477	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9911	352	intron_retention	FALSE	canonical	3	18	junction_2	15.0598804776134	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846327	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.179	chr13	-	2339	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9925	352	intron_retention	FALSE	canonical	1	1	junction_4	20.1057205789795	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846341	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66834948_66835046_66836256_66836399_66846221
ES.9501.18	chr13	-	5500	5	Intergenic	novelGene_7905	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	16.6339261751398	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAAGTTTTCTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	66384579	66355878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66357418_66358146_66358227_66359448_66363161_66384209_66384271_66384471
ES.9501.180	chr13	-	2266	5	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9925	352	intron_retention	FALSE	canonical	1	1	junction_1	19.3067345763078	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846341	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.181	chr13	-	2174	4	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9911	352	intron_retention	FALSE	canonical	1	1	junction_1	22.0655588845805	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTGAGATTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846327	66830550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66834628_66834801_66836256_66836399_66846221
ES.9501.182	chr13	-	3667	6	Fusion	ENSMUSG00000114549.2_ENSMUSG00000114353.2	novel	1621	5	NA	NA	0	351	intron_retention	FALSE	canonical	0	0	junction_3	68.8145333487048	331	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTGTCTGAGATTCC	NA	False	NA	NA	False	AATAAA	-16	NA	66950624	66830551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66833621_66834628_66834801_66836256_66836399_66942701_66942763_66942962_66943090_66950528
ES.9501.183	chr13	-	4556	2	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	301	351	intron_retention	FALSE	canonical	3	18	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTGTCTGAGATTCC	NA	False	NA	NA	False	AATAAA	-16	NA	66836115	66830551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66833621_66834628
ES.9501.184	chr13	-	2315	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9924	348	intron_retention	FALSE	canonical	3	25	junction_5	11.6961532137708	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGCTTGTCTGAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	66846340	66830554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.185	chr13	-	2204	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9945	216	intron_retention	FALSE	canonical	3	25	junction_5	11.6961532137708	148	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTTACTTTACTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	66846361	66830686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.186	chr13	-	1660	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9924	-326	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	20.1057205789795	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTTTTTTTTTCTTCC	NA	False	NA	NA	False	AATAAA	-20	NA	66846340	66831228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66834948_66835046_66836256_66836399_66846221
ES.9501.187	chr13	-	1539	5	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9901	-327	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	11.6726175299288	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTTTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	66846317	66831229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66846221
ES.9501.188	chr13	-	1661	6	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9945	-327	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_5	11.6961532137708	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTTTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	66846361	66831229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66841838_66841917_66846221
ES.9501.189	chr13	-	3861	2	Genic_Genomic	ENSMUSG00000117784.2	novel	2241	5	NA	NA	1247	125855	multi-exon	TRUE	non_canonical	0	0	junction_1	0	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTTTTTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	66962036	66831229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66831432_66958377
ES.9501.191	chr13	-	2822	4	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9924	-329	intron_retention	FALSE	canonical	3	18	junction_1	15.8954920234218	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846340	66831231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66833621_66834628_66834801_66836256_66836399_66846221
ES.9501.192	chr13	-	1575	5	NNC	ENSMUSG00000114549.2	novel	1621	5	NA	NA	-9911	-329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	22.4388056723169	147	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	66846327	66831231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66832305_66833395_66833450_66834628_66834801_66836256_66836399_66846193
ES.9501.193	chr13	-	3665	10	Fusion	ENSMUSG00000114839.2_ENSMUSG00000114549.2	novel	1621	5	NA	NA	-11550	-329	intron_retention	FALSE	canonical	0	0	junction_5	60.7297189638821	182	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTTTCT	4419	False	NA	NA	False	AATAAA	-17	NA	66900927	66831231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66833621_66834628_66834801_66836256_66836399_66841838_66841917_66844743_66844936_66887099_66887259_66888839_66889043_66889243_66889330_66890829_66891046_66900899
ES.9501.194	chr13	-	1092	2	Intergenic	novelGene_7971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTGTGCAAGCTGA	NA	False	NA	NA	False	AATAAA	-15	NA	66864006	66862720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66863153_66863346
ES.9501.195	chr13	-	3765	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11708	885	intron_retention	FALSE	canonical	3	63	junction_2	69.5	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGTGGCATAAACCAG	4261	False	NA	NA	False	NA	NA	NA	66901085	66885549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66889043_66889243_66889330_66900899
ES.9501.196	chr13	-	3724	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3582	885	intron_retention	FALSE	canonical	3	46	junction_2	78	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGGTGGCATAAACCAG	NA	False	NA	NA	False	NA	NA	NA	66892959	66885549	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66889043_66889243_66889330_66892814
ES.9501.197	chr13	-	2102	4	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11656	-57	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	82.6599459633665	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTCACTGTACTCAC	4313	False	NA	NA	False	NA	NA	NA	66901033	66886491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66888171_66888839_66889043_66889243_66889330_66900899
ES.9501.198	chr13	-	595	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3580	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	78	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66892957	66888676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66889043_66889243_66889330_66892814
ES.9501.199	chr13	-	4391	2	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3891	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	202	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	66893268	66888676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66889043_66889243
ES.9501.2	chr13	-	4264	3	ISM	ENSMUSG00000113559.2	ENSMUST00000220526.2	1005	4	277	-21	267	21	3prime_fragment	FALSE	canonical	0	0	junction_1	84	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACTGCTGTAAACCCC	NA	False	NA	NA	False	NA	NA	NA	66130328	66124512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66125065_66126415_66126651_66126851
ES.9501.20	chr13	-	5703	5	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16544	4783	multi-exon	TRUE	canonical	0	0	junction_1	42.4403993854912	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCTTGGTCATGGAATC	9943	False	NA	NA	False	NA	NA	NA	66391931	66370349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375028_66375278_66375998_66384209_66384271_66384471_66384599_66391813
ES.9501.200	chr13	-	5545	1	Genic_Genomic	ENSMUSG00000114839.2	novel	NA	NA	NA	NA	-4846	-2244	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	66894223	66888678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66888700_66894200
ES.9501.201	chr13	-	632	3	NNC	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-11707	-2247	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	69.5	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAGAA	4262	False	NA	NA	False	NA	NA	NA	66901084	66888681	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66889043_66889243_66889330_66900899
ES.9501.202	chr13	-	5589	1	Intergenic	novelGene_7972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTACAGTGAGGGCAGA	4251	False	NA	NA	False	CATAAA	-37	NA	66901095	66895506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66895500_66901100
ES.9501.203	chr13	-	918	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	-5679	15503	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.4491720612996	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAAAATCATTAAT	NA	False	NA	NA	False	NA	NA	NA	66956303	66924630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66924982_66927520_66927601_66942701_66942763_66942962_66943090_66956004
ES.9501.204	chr13	-	2916	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	-17	-2435	-17	1153	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTATGTCAATTTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	66950641	66938980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.205	chr13	-	3323	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	-5702	1141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	78.1568934899539	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAGTAGATATAAACTAT	NA	False	NA	NA	False	ATTAAA	-5	NA	66956326	66938992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66941596_66942701_66942763_66942962_66943090_66954514_66954725_66956004
ES.9501.206	chr13	-	5057	8	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7268	58465	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	43.35520118034	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1326	False	NA	1	True	NA	NA	NA	67010203	66939249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66939305_66997468_66999469_66999636_66999964_67000047_67000547_67000630_67002178_67002223_67002611_67002809_67002937_67010088
ES.9501.207	chr13	-	2661	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	-33	-2164	-33	882	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950657	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.208	chr13	-	5432	3	ISM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	4635	-2164	-2901	882	3prime_fragment	FALSE	canonical	3	149	junction_1	7	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66945989	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66941596_66942701_66942763_66942962
ES.9501.209	chr13	-	2377	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	882	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	67.8762661023719	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950624	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.21	chr13	-	5953	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16544	4782	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCCTTGGTCATGGAAT	9943	False	NA	NA	False	NA	NA	NA	66391931	66370350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
ES.9501.210	chr13	-	3778	3	NIC	ENSMUSG00000114353.2	novel	464	4	NA	NA	-44	882	intron_retention	FALSE	canonical	3	157	junction_2	3	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950668	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_66942763_66942962_66943090_66950528
ES.9501.211	chr13	-	3368	4	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.4644876010491	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950624	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66942336_66942701_66942763_66942962_66943090_66950528
ES.9501.212	chr13	-	3483	4	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	882	intron_retention	FALSE	canonical	0	0	junction_1	75.4644876010491	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-1	True	NA	NA	NA	66950624	66939251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940626_66940876_66942763_66942962_66943090_66950528
ES.9501.213	chr13	-	7020	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	2584	881	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	78.1568934899539	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-2	True	NA	NA	NA	66948040	66939252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943574_66943784
ES.9501.214	chr13	-	3412	7	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7268	58462	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.1410879802373	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	1326	False	NA	-2	True	NA	NA	NA	67010203	66939252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66939312_66997474_66998931_66999181_66999939_67000106_67000944_67002549_67002611_67002809_67002937_67010088
ES.9501.215	chr13	-	3844	8	Fusion	ENSMUSG00000114353.2_ENSMUSG00000117784.2	novel	464	4	NA	NA	-12923	881	multi-exon	FALSE	canonical	0	0	junction_3	67.5446941978844	231	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-2	True	NA	NA	NA	66976206	66939252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66941596_66942701_66942763_66942962_66943090_66959126_66959251_66961546_66961719_66963182_66963325_66968744_66968823_66975409
ES.9501.216	chr13	-	2378	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	880	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	67.8762661023719	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	-3	True	NA	NA	NA	66950624	66939253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940647_66940894_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.217	chr13	-	5253	6	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	880	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	75.4384517338472	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	-3	True	NA	NA	NA	66950624	66939253	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66941596_66942701_66942763_66942962_66943586_66943796_66945852_66945933_66946010_66950528
ES.9501.218	chr13	-	2531	6	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.5841806283343	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACCTTGACTTAGCTCC	NA	False	NA	-4	True	NA	NA	NA	66950624	66939254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943090_66946612_66946770_66950528
ES.9501.219	chr13	-	3515	8	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7293	58458	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	45.0632208963254	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAACCTTGACTTAGCT	1301	False	NA	-6	True	NA	NA	NA	67010228	66939256	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66939305_66997468_66999469_66999636_66999964_67000047_67000463_67000546_67000944_67002549_67002611_67002809_67002937_67010088
ES.9501.22	chr13	-	3234	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16530	2077	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTGCCTTGGTCAC	9957	False	NA	NA	False	NA	NA	NA	66391917	66373055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
ES.9501.220	chr13	-	1322	5	NNC	ENSMUSG00000114353.2	novel	464	4	NA	NA	0	-173	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8762661023719	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAACATAATCAATGTG	NA	False	NA	NA	False	NA	NA	NA	66950624	66940306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66940626_66940876_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.221	chr13	-	580	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	-19	-97	-19	97	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTTATGAATGTAATCA	NA	False	NA	NA	False	NA	NA	NA	66950643	66941318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ES.9501.222	chr13	-	8042	5	NNC	ENSMUSG00000117784.2	novel	2241	5	NA	NA	-17780	-835	intron_retention	FALSE	canonical	0	0	junction_3	34.1796723214252	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCCTCCAAAGAGCTGT	NA	False	NA	NA	False	GATAAA	-22	NA	66981063	66957919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66961719_66963182_66963325_66968744_66968823_66976590_66977274_66977723
ES.9501.223	chr13	-	2642	10	Fusion	ENSMUSG00000114816.2_ENSMUSG00000117784.2	novel	2241	5	NA	NA	-7259	-1090	multi-exon	FALSE	canonical	0	0	junction_5	38.8418763453144	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	1335	False	NA	NA	False	AATAAA	-19	NA	67010194	66958174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66959251_66960341_66960396_66961546_66961719_66963182_66963325_66968744_66968823_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.224	chr13	-	4401	4	NNC	ENSMUSG00000117784.2	novel	2241	5	NA	NA	-13944	-1090	intron_retention	FALSE	canonical	0	0	junction_3	9.39266853573691	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66977227	66958174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66961719_66963182_66963325_66968744_66968823_66976590
ES.9501.225	chr13	-	3626	6	NNC	ENSMUSG00000117784.2	novel	2241	5	NA	NA	-14527	-1090	intron_retention	FALSE	canonical	0	0	junction_4	8.1338797630651	140	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTTTTTCTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	66977810	66958174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66961199_66961546_66961719_66963182_66963325_66968744_66968823_66976590_66976714_66977723
ES.9501.226	chr13	-	2484	9	Fusion	ENSMUSG00000114816.2_ENSMUSG00000117784.2	novel	2241	5	NA	NA	101	-1092	multi-exon	FALSE	non_canonical	0	0	junction_2	27.5760312590481	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	8695	False	NA	NA	False	AATAAA	-17	NA	67002834	66958176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66959251_66960341_66960446_66961546_66961719_66963182_66963325_66968744_66968821_66976586_66977274_66977723_66977867_67002549_67002611_67002809
ES.9501.227	chr13	-	2825	12	Fusion	ENSMUSG00000114816.2_ENSMUSG00000117784.2	novel	2241	5	NA	NA	-7259	-1092	multi-exon	FALSE	non_canonical	0	0	junction_5	25.2782858504526	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTCTTC	1335	False	NA	NA	False	AATAAA	-17	NA	67010194	66958176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66959251_66960341_66960396_66961546_66961719_66963182_66963325_66968744_66968823_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002930_67005371_67005487_67005568_67005646_67010088
ES.9501.228	chr13	-	4542	9	Fusion	ENSMUSG00000114816.2_ENSMUSG00000117784.2	novel	2241	5	NA	NA	-7268	-1093	intron_retention	FALSE	canonical	0	0	junction_4	40.2924853415621	175	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGATGTTTTTTTCTT	1326	False	NA	NA	False	AATAAA	-16	NA	67010203	66958177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66961199_66961546_66961719_66963182_66963325_66968744_66968823_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.229	chr13	-	2105	7	Fusion	ENSMUSG00000114816.2_ENSMUSG00000117784.2	novel	2241	5	NA	NA	-7263	-1956	intron_retention	FALSE	canonical	0	0	junction_4	40.895870478842	174	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCTAAAATCTTTATGT	1331	False	NA	NA	False	AATATA	-19	NA	67010198	66959040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66959251_66960341_66961719_66963182_66963325_66968744_66968823_67002549_67002611_67002809_67002937_67010088
ES.9501.23	chr13	-	4051	11	Fusion	ENSMUSG00000091347.3_ENSMUSG00000114027.2	novel	2349	5	NA	NA	-35935	1488	multi-exon	FALSE	canonical	0	0	junction_3	32.2732087031953	271	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1871	False	NA	2	True	NA	NA	NA	66439288	66373644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66375998_66384209_66384271_66384471_66384599_66399135_66399260_66400350_66400405_66401557_66401730_66403192_66403335_66408737_66408816_66416652_66417335_66417784_66417928_66439173
ES.9501.230	chr13	-	262	1	Intergenic	novelGene_7975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGAATATTTATAG	NA	False	NA	NA	False	NA	NA	NA	66962753	66962491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66962500_66962800
ES.9501.231	chr13	-	3031	2	Intergenic	novelGene_7977	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATAAAGTTTCTTCCTC	1299	False	NA	NA	False	AATAAA	-27	NA	67010230	66974977	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66977867_67010088
ES.9501.232	chr13	-	2744	5	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7271	22736	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	35.6677375228651	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAATAAAGTTTCTTCCT	1323	False	NA	NA	False	AATAAA	-26	NA	67010206	66974978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.233	chr13	-	1078	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7273	22731	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	41.6730128500448	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1321	False	NA	NA	False	AATAAA	-21	NA	67010208	66974983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66975488_66976590_66976714_66977723_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.234	chr13	-	3170	4	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7252	22731	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	39.8246155034798	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1342	False	NA	NA	False	AATAAA	-21	NA	67010187	66974983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.235	chr13	-	2083	5	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7268	22731	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.0460672226375	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1326	False	NA	NA	False	AATAAA	-21	NA	67010203	66974983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66975488_66976590_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.236	chr13	-	6188	5	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-4673	22729	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.1856353751441	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	3921	False	NA	NA	False	AATAAA	-19	NA	67007608	66974985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66975488_66976590_66977274_66977723_66977867_67002549_67002611_67002809
ES.9501.237	chr13	-	1029	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7268	20947	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	29.7294466816993	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATAGCCCCCGATGCCT	1326	False	NA	NA	False	NA	NA	NA	67010203	66976767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67005568_67005646_67010088
ES.9501.238	chr13	-	947	5	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7263	20947	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	35.6677375228651	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATAGCCCCCGATGCCT	1331	False	NA	NA	False	NA	NA	NA	67010198	66976767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
ES.9501.239	chr13	-	671	1	Intergenic	novelGene_7978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATTAATTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	66992358	66991687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66991700_66992400
ES.9501.24	chr13	-	2657	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16544	1486	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	9943	False	NA	0	True	NA	NA	NA	66391931	66373646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
ES.9501.240	chr13	-	6163	3	Fusion	ENSMUSG00000114816.2_ENSMUSG00000114793.2	novel	3416	3	NA	NA	2516	387	multi-exon	TRUE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATACTTAGGAACAGT	NA	False	NA	NA	False	AATAAA	-14	NA	67000419	66993500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66999013_66999264_66999721_67000224
ES.9501.241	chr13	-	4152	1	Genic_Genomic	ENSMUSG00000114816.2	novel	NA	NA	NA	NA	3010	1941	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTCCAGGCATGGTT	NA	False	NA	NA	False	NA	NA	NA	66999925	66995773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66995800_66999900
ES.9501.242	chr13	-	4436	7	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7293	1215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.1410879802373	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCCTTTGTCCTTTG	1301	False	NA	NA	False	NA	NA	NA	67010228	66996499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66999469_66999636_66999964_67000047_67000463_67000546_67000944_67002549_67002611_67002809_67002937_67010088
ES.9501.243	chr13	-	3895	4	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7329	302	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	29.9332590941915	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1265	False	NA	2	True	NA	NA	NA	67010264	66997412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67000944_67002549_67002611_67002809_67002937_67010088
ES.9501.244	chr13	-	3392	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7246	301	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	47.6084026197057	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACTTAGCTCCATTA	1348	False	NA	1	True	NA	NA	NA	67010181	66997413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66999046_66999549_67000944_67001637_67001723_67002549_67002611_67002809_67002937_67010088
ES.9501.25	chr13	-	1461	2	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	196	1486	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	0	True	NA	NA	NA	66375191	66373646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66374965_66375048
ES.9501.26	chr13	-	2210	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16533	1050	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTACTCTCCAAATAC	9954	False	NA	NA	False	NA	NA	NA	66391920	66374082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
ES.9501.27	chr13	-	1089	2	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-249	753	multi-exon	TRUE	non_canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTAACTGTTTCCTT	NA	False	NA	NA	False	NA	NA	NA	66375636	66374379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66375435_66375602
ES.9501.28	chr13	-	225	1	Intergenic	novelGene_7906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGTTTTGTTT	7501	False	NA	NA	False	AAAACA	-32	NA	66394373	66394148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66394100_66394400
ES.9501.29	chr13	-	2164	9	Fusion	ENSMUSG00000114027.2_ENSMUSG00000118666.1	novel	2349	5	NA	NA	-7314	384	multi-exon	FALSE	canonical	1	2	junction_6	23.7697286480094	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTGTCAGCTTTCTTC	1880	False	NA	NA	False	NA	NA	NA	66439279	66396710	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66398011_66399135_66399260_66400350_66400405_66401557_66401730_66403192_66403335_66408737_66408816_66431569_66431631_66431830_66431958_66439173
ES.9501.3	chr13	-	2444	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-44700	3	intron_retention	FALSE	canonical	3	12	junction_2	78	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACCGTGTGAATGTA	NA	False	NA	NA	False	NA	NA	NA	66175305	66124530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66126651_66126851_66126979_66175108
ES.9501.30	chr13	-	2675	11	Fusion	ENSMUSG00000114027.2_ENSMUSG00000118666.1	novel	2349	5	NA	NA	-7324	383	multi-exon	FALSE	non_canonical	0	0	junction_4	23.754788990854	214	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCAGCTTTCTT	1870	False	NA	NA	False	NA	NA	NA	66439289	66396711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66398011_66399135_66399260_66400350_66400405_66401126_66401209_66401557_66401730_66401877_66402298_66403192_66403335_66408737_66408816_66431569_66431631_66431830_66431958_66439173
ES.9501.31	chr13	-	1219	4	Fusion	ENSMUSG00000114027.2_ENSMUSG00000074832.12	novel	2349	5	NA	NA	-31	247	multi-exon	FALSE	canonical	0	0	junction_1	82.3097132110718	540	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATTGCATATATTTATG	NA	False	NA	NA	False	NA	NA	NA	66589210	66396847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66397749_66581478_66581540_66581739_66581867_66589080
ES.9501.32	chr13	-	9335	1	Genic_Genomic	ENSMUSG00000114027.2	novel	NA	NA	NA	NA	-8476	-5400	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATTTATAGTATAATT	NA	False	NA	NA	False	TTTAAA	-5	NA	66411829	66402494	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66402500_66411800
ES.9501.33	chr13	-	1465	7	Fusion	ENSMUSG00000114729.2_ENSMUSG00000114027.2_ENSMUSG00000118666.1	novel	2349	5	NA	NA	-6323	-5407	multi-exon	FALSE	canonical	1	3	junction_2	13.4505266315735	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGAATATTTATAG	NA	False	NA	NA	False	NA	NA	NA	66497317	66402501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66403335_66408737_66408816_66416652_66416776_66417784_66417928_66431569_66431631_66490865_66490993_66497217
ES.9501.34	chr13	-	2861	1	Genic_Genomic	ENSMUSG00000114027.2	novel	NA	NA	NA	NA	-2758	-6156	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTTTGCTATTCTCCT	NA	False	NA	NA	False	NA	NA	NA	66406111	66403250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66403200_66406100
ES.9501.35	chr13	-	3240	1	Intergenic	novelGene_7907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	66413494	66410254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66410300_66413500
ES.9501.36	chr13	-	7060	3	Intergenic	novelGene_7908	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	2.5	211	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCTCTCGTGTTCCTT	1846	False	NA	NA	False	NA	NA	NA	66439313	66410950	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66415592_66415648_66417928_66439173
ES.9501.37	chr13	-	2600	7	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7308	14669	multi-exon	TRUE	non_canonical	0	0	junction_1	25.4017715917611	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTTCCACCTTTCCC	1886	False	NA	NA	False	ATTAAA	-9	NA	66439273	66414280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66415556_66415611_66415824_66416652_66417335_66417784_66417928_66431569_66431631_66431830_66431958_66439173
ES.9501.38	chr13	-	3250	4	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7348	13944	multi-exon	FALSE	canonical	3	6	junction_1	27.3292679903595	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCTCGGTTTATAA	1846	False	NA	NA	False	AATAAA	-36	NA	66439313	66415005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66417928_66431569_66431631_66431830_66431958_66439173
ES.9501.39	chr13	-	1353	6	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	13929	multi-exon	FALSE	canonical	2	6	junction_3	25.7868183380579	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1890	False	NA	NA	False	AATAAA	-21	NA	66439269	66415020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66415824_66416652_66416776_66417784_66417928_66431569_66431631_66431830_66431958_66439173
ES.9501.4	chr13	-	1023	4	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-8293	-15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.5423434698779	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCAGATACAGGAG	NA	False	NA	NA	False	NA	NA	NA	66138898	66124548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66125065_66126415_66126651_66126851_66126979_66138753
ES.9501.40	chr13	-	3165	5	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7325	13929	multi-exon	TRUE	non_canonical	0	0	junction_1	30.2933573576783	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	1869	False	NA	NA	False	AATAAA	-21	NA	66439290	66415020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66415573_66415619_66417928_66431569_66431631_66431830_66431958_66439173
ES.9501.41	chr13	-	2935	3	Intergenic	novelGene_7909	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	2.5	208	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACCTGGAAATAAAGT	1901	False	NA	NA	False	AATAAA	-18	NA	66439258	66415023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66415551_66415604_66417928_66439173
ES.9501.43	chr13	-	1866	7	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7302	13926	multi-exon	TRUE	non_canonical	0	0	junction_1	25.4017715917611	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACCTGGAAATAAAGT	1892	False	NA	NA	False	AATAAA	-18	NA	66439267	66415023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66415616_66415656_66415824_66416652_66417335_66417784_66417928_66431569_66431631_66431830_66431958_66439173
ES.9501.44	chr13	-	1949	4	Intergenic	novelGene_7910	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	3.29983164553722	208	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACCTGGAAATAAAGT	1876	False	NA	NA	False	AATAAA	-18	NA	66439283	66415023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66415556_66415611_66416776_66417784_66417928_66439173
ES.9501.45	chr13	-	1441	5	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	515	5	NA	NA	-11	83954	multi-exon	TRUE	non_canonical	0	0	junction_1	14.2894191624432	534	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACCTGGAAATAAAGT	NA	False	NA	NA	False	AATAAA	-18	NA	66589190	66415023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66415204_66516700_66517022_66518264_66518952_66519399_66519543_66589080
ES.9501.47	chr13	-	10176	6	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7325	7331	multi-exon	TRUE	non_canonical	0	0	junction_1	33.9623320754038	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGTTGTCTTGTCATTA	1869	False	NA	NA	False	AGTAAA	-15	NA	66439290	66420401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66426760_66426807_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.48	chr13	-	7632	4	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7322	4659	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTACCCTCATCTTCT	1872	False	NA	NA	False	NA	NA	NA	66439287	66423073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.49	chr13	-	6020	5	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	3148	multi-exon	FALSE	canonical	0	0	junction_1	30.4415423393756	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCTTGGTCATGAAATC	1890	False	NA	NA	False	NA	NA	NA	66439269	66424584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.5	chr13	-	1887	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-44698	-552	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	78	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTGGCTATCATTGCA	NA	False	NA	NA	False	NA	NA	NA	66175303	66125085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66126651_66126851_66126979_66175108
ES.9501.50	chr13	-	6131	4	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7336	3144	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGCCTTGGTCATGA	1858	False	NA	NA	False	NA	NA	NA	66439301	66424588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.51	chr13	-	2918	2	Antisense	novelGene_ENSMUSG00000114616.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	66427554	66424588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_66426767_66426814
ES.9501.52	chr13	-	4325	4	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7323	1351	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGATGGACTGTGAT	1871	False	NA	NA	False	NA	NA	NA	66439288	66426381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.53	chr13	-	3943	6	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7304	1120	intron_retention	TRUE	non_canonical	0	0	junction_1	33.9623320754038	197	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGAAAGAAAGAAAGAAAAA	1890	False	NA	NA	False	NA	NA	NA	66439269	66426612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66426767_66426814_66429623_66429706_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.54	chr13	-	3630	4	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7318	661	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGACTTTGTCCTTTGTT	1876	False	NA	NA	False	NA	NA	NA	66439283	66427071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.55	chr13	-	3238	5	Fusion	ENSMUSG00000114239.2_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7325	345	multi-exon	FALSE	canonical	0	0	junction_1	30.4415423393756	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCACAGTTTGTC	1869	False	NA	NA	False	NA	NA	NA	66439290	66427387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.56	chr13	-	2813	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7600	967	intron_retention	FALSE	canonical	0	0	junction_3	32.7244387100664	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1594	False	NA	-1	True	NA	NA	NA	66439565	66427982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439361
ES.9501.57	chr13	-	2936	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7348	967	intron_retention	FALSE	canonical	1	2	junction_4	32.5499615975196	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1846	False	NA	-1	True	NA	NA	NA	66439313	66427982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66437712_66437900_66439173
ES.9501.58	chr13	-	5498	6	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7350	967	intron_retention	FALSE	canonical	0	0	junction_4	32.3666495022268	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1844	False	NA	-1	True	NA	NA	NA	66439315	66427982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66434506_66434587_66434665_66435299_66435422_66439173
ES.9501.59	chr13	-	5889	3	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-2189	967	intron_retention	FALSE	canonical	0	0	junction_1	27.5	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	7005	False	NA	-1	True	NA	NA	NA	66434154	66427982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429686_66429768_66431631_66431830
ES.9501.6	chr13	-	3859	4	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-49222	-1795	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	76.524505878836	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAGAATAT	NA	False	NA	NA	False	NA	NA	NA	66179827	66126328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66126651_66126851_66126979_66175108_66178408_66179716
ES.9501.60	chr13	-	5384	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7332	965	intron_retention	FALSE	canonical	0	0	junction_4	32.6266762021509	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	1862	False	NA	-3	True	NA	NA	NA	66439297	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66434506_66434587_66434665_66439145
ES.9501.61	chr13	-	2749	5	Fusion	ENSMUSG00000074832.12_ENSMUSG00000118666.1	novel	1567	4	NA	NA	-43	965	intron_retention	TRUE	non_canonical	0	0	junction_4	30.4415423393756	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-3	True	NA	NA	NA	66589222	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173_66439251_66589157
ES.9501.64	chr13	-	1895	3	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	1835	965	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	-3	True	NA	NA	NA	66430130	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429686_66429768_66429934_66430101
ES.9501.65	chr13	-	5508	6	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7327	965	intron_retention	FALSE	canonical	0	0	junction_5	32.1956518803394	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	1867	False	NA	-3	True	NA	NA	NA	66439292	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66434506_66434587_66434665_66435264_66435422_66439173
ES.9501.66	chr13	-	2641	5	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7325	965	intron_retention	TRUE	non_canonical	0	0	junction_1	30.4415423393756	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	1869	False	NA	-3	True	NA	NA	NA	66439290	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429662_66429744_66430404_66431569_66431631_66431830_66431958_66439173
ES.9501.67	chr13	-	2730	6	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7302	965	intron_retention	TRUE	non_canonical	0	0	junction_1	33.3802336720401	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	1892	False	NA	-3	True	NA	NA	NA	66439267	66427984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429639_66429720_66430404_66431569_66431631_66431830_66431958_66434553_66434665_66439173
ES.9501.68	chr13	-	3064	7	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7318	964	intron_retention	FALSE	canonical	0	0	junction_3	31.2129780700272	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	1876	False	NA	-4	True	NA	NA	NA	66439283	66427985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66434365_66434506_66434587_66434665_66435264_66435396_66439173
ES.9501.69	chr13	-	973	6	Genic_Genomic	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-65369	964	multi-exon	TRUE	non_canonical	0	0	junction_1	33.9623320754038	216	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-4	True	NA	NA	NA	66497334	66427985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66428414_66430162_66430404_66431569_66431631_66431830_66431958_66439173_66439270_66497314
ES.9501.7	chr13	-	2702	2	ISM	ENSMUSG00000113559.2	ENSMUST00000220526.2	1005	4	1311	1858	1301	-1858	internal_fragment	FALSE	canonical	3	168	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	66129294	66126391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66126651_66126851
ES.9501.70	chr13	-	3804	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7323	964	intron_retention	FALSE	canonical	0	0	junction_1	30.092450142113	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	1871	False	NA	-4	True	NA	NA	NA	66439288	66427985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429686_66429768_66431631_66431830_66431958_66439173
ES.9501.71	chr13	-	3018	7	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7323	964	intron_retention	FALSE	canonical	0	0	junction_3	31.2129780700272	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	1871	False	NA	-4	True	NA	NA	NA	66439288	66427985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66434416_66434506_66434587_66434665_66435264_66435396_66439173
ES.9501.72	chr13	-	2639	6	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-65369	964	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.9623320754038	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGACTTAGCTCCAT	NA	False	NA	-4	True	NA	NA	NA	66497334	66427985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66429686_66429768_66430404_66431569_66431631_66431830_66431958_66439173_66439270_66497314
ES.9501.74	chr13	-	2750	1	Intergenic	novelGene_7912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGCAAATAATAAA	NA	False	NA	NA	False	AAAACA	-19	NA	66444204	66441454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66441500_66444200
ES.9501.75	chr13	-	7685	12	Fusion	ENSMUSG00000094499.4_ENSMUSG00000114729.2	novel	3029	10	NA	NA	-17961	2417	multi-exon	FALSE	canonical	0	0	junction_3	11.4991914915214	122	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	66522767	66486227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66489002_66490608_66490670_66490865_66490993_66500607_66500732_66501821_66501876_66502022_66502047_66503053_66503226_66504680_66504823_66510264_66510343_66516943_66517022_66518268_66518952_66519399
ES.9501.76	chr13	-	2706	5	Genic_Genomic	ENSMUSG00000114729.2	novel	2350	1	NA	NA	-6307	2413	multi-exon	TRUE	non_canonical	0	0	junction_1	17.7253349756782	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66497301	66486231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66487864_66488199_66489002_66490608_66490670_66490865_66490993_66497217
ES.9501.77	chr13	-	3307	10	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	3029	10	NA	NA	0	-6	intron_retention	FALSE	canonical	0	0	junction_2	64.7473723190542	356	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGCTTGTCTGAGAT	NA	False	NA	NA	False	AATAAA	-13	NA	66589179	66498983	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66500732_66501821_66501876_66503053_66503226_66504680_66504823_66510264_66510343_66518268_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
ES.9501.78	chr13	-	8711	10	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-7	-192	intron_retention	FALSE	canonical	0	0	junction_2	9.8369422128406	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGCCTCCAAAGAGCT	NA	False	NA	NA	False	GATAAA	-20	NA	66549939	66499404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66500732_66501821_66501876_66503053_66503226_66504680_66504823_66510264_66510343_66516943_66517022_66518268_66518952_66519399_66519543_66523104_66529024_66549824
ES.9501.79	chr13	-	1754	6	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	3029	10	NA	NA	0	-449	multi-exon	TRUE	canonical	0	0	junction_2	81.7836169412921	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGATGTTTTTTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	66589179	66499661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66500732_66501821_66502047_66503053_66503226_66581478_66581540_66581739_66581867_66589080
ES.9501.8	chr13	-	571	3	NNC	ENSMUSG00000113559.2	novel	1005	4	NA	NA	-125936	-1860	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	76.5	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66256541	66126393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66126651_66126851_66126979_66256354
ES.9501.80	chr13	-	5380	3	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-18038	-16557	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	7	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTTTCCCTATTCCCA	NA	False	NA	NA	False	AATAAA	-17	NA	66522844	66515769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66517022_66518268_66518952_66519399
ES.9501.81	chr13	-	2428	6	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-12	-16563	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.2178429299041	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCCACCTTTCCCTA	NA	False	NA	NA	False	AATAAA	-11	NA	66549944	66515775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66517022_66518268_66518952_66519399_66519543_66523104_66523226_66528908_66529024_66549824
ES.9501.82	chr13	-	3087	6	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-26	-17302	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.0018180315801	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	66549958	66516514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66518952_66519399_66519543_66523104_66523240_66524388_66524440_66528836_66529024_66549824
ES.9501.83	chr13	-	7371	5	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-11	-17302	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	9.52299847737046	130	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	66549943	66516514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66517022_66518268_66518952_66519399_66519543_66523104_66529024_66549824
ES.9501.84	chr13	-	4476	4	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-21025	-17305	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	10.7082522694727	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGGAAATAAAGTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	66525831	66516517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66517441_66518268_66518952_66519399_66519543_66523104
ES.9501.85	chr13	-	4205	2	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-16366	-17307	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACCTGGAAATAAAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	66521172	66516519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66518952_66519399
ES.9501.86	chr13	-	5280	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	27123	17544	-18003	-17309	internal_fragment	FALSE	canonical	3	16	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAAACCTGGAAATAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	66522809	66516521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66518392_66519399
ES.9501.87	chr13	-	936	5	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	515	5	NA	NA	0	-19233	multi-exon	FALSE	canonical	3	33	junction_1	68.0661443009665	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATAGCCCCCGATGCCT	NA	False	NA	NA	False	NA	NA	NA	66589179	66518445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
ES.9501.88	chr13	-	964	5	Fusion	ENSMUSG00000094499.4_ENSMUSG00000074832.12	novel	515	5	NA	NA	-379	-19584	multi-exon	FALSE	canonical	3	33	junction_1	68.0661443009665	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCAGAAGGAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	66589558	66518796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_66518952_66519399_66519543_66581478_66581540_66581739_66581867_66589080
ES.9501.89	chr13	-	7131	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	-12	23035	-12	-22800	5prime_fragment	FALSE	canonical	3	14	junction_1	0	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTGTCATTATTTG	NA	False	NA	-1	True	AATAAA	-19	NA	66549944	66522012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66529024_66549824
ES.9501.9	chr13	-	2322	1	NIC	ENSMUSG00000113559.2	novel	1588	5	NA	NA	-1515	-1860	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66128715	66126393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_66126400_66128700
ES.9501.90	chr13	-	6951	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	-9	23212	-9	-22977	5prime_fragment	FALSE	canonical	3	14	junction_1	0	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACGGTCTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	66549941	66522189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66529024_66549824
ES.9501.91	chr13	-	7059	3	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	-2	-22993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCTGCTATACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	66549934	66522205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66529024_66545900_66546032_66549824
ES.9501.92	chr13	-	5192	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	0	24962	0	-24727	5prime_fragment	FALSE	canonical	3	14	junction_1	0	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAGTTAGAAAATGATCC	NA	False	NA	NA	False	NA	NA	NA	66549932	66523939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66529024_66549824
ES.9501.93	chr13	-	5060	1	NIC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	20827	-24833	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCATTGTAATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	66529105	66524045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_66524000_66529100
ES.9501.94	chr13	-	680	2	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	20827	-24836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTCATTGTAATTCT	NA	False	NA	NA	False	NA	NA	NA	66529105	66524048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_66524460_66528836
ES.9501.95	chr13	-	2939	2	ISM	ENSMUSG00000094499.4	ENSMUST00000234850.2	3029	10	-11	27226	-11	-26991	5prime_fragment	FALSE	canonical	3	14	junction_1	0	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	66549943	66526203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66529024_66549824
ES.9501.96	chr13	-	1151	6	Genic_Genomic	ENSMUSG00000114839.2	novel	1153	3	NA	NA	-3582	357338	multi-exon	TRUE	non_canonical	0	0	junction_1	78.2549678934188	768	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCAGAACGGTTTCCGT	NA	False	NA	NA	False	NA	NA	NA	66892959	66529096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_66529443_66694048_66694149_66882969_66883241_66888839_66889043_66889243_66889330_66892814
ES.9501.97	chr13	-	2896	2	Intergenic	novelGene_7914	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGTTGCCTTGGTCAT	NA	False	NA	-5	True	NA	NA	NA	66577386	66574395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_66576506_66576600
ES.9501.98	chr13	-	4089	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	-71	-1431	-31	1431	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66589210	66576519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ES.9501.99	chr13	-	5196	3	ISM	ENSMUSG00000074832.12	ENSMUST00000173583.8	515	5	-16	10413	-16	1365	5prime_fragment	FALSE	canonical	3	147	junction_1	23	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAAAGGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	66589195	66576585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_66581540_66581739_66581867_66589080
ES.9502.1	chr13	+	2731	2	Genic_Genomic	ENSMUSG00000071294.3	novel	549	1	NA	NA	-2280	1088	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGTTTAGTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	67010307	67014224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_67010515_67011700
ES.9502.2	chr13	+	4394	1	FSM	ENSMUSG00000071294.3	ENSMUST00000091531.3	549	1	-2154	-1691	-2154	1691	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGAATTTTTATGTT	NA	False	NA	NA	False	AATAAA	-13	NA	67010433	67014827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67010400_67014800
ES.9503.1	chr13	-	219	1	Intergenic	novelGene_7979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGAACCATATGGTTA	NA	False	NA	NA	False	NA	NA	NA	67011599	67011380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67011400_67011600
ES.9504.1	chr13	+	2453	2	Genic_Genomic	ENSMUSG00000095847.2	novel	579	1	NA	NA	-5696	332	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCAATTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	67016448	67023055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_67016681_67020834
ES.9505.1	chr13	+	394	1	Intergenic	novelGene_7980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGCCCCAATTAAATG	NA	False	NA	NA	False	NA	NA	NA	67026920	67027314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67026900_67027300
ES.9506.1	chr13	+	3149	1	Intergenic	novelGene_7981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67072779	67075928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67072800_67075900
ES.9507.1	chr13	+	3086	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	-40	378	-40	-103	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTTTCTTTGTATCT	7818	False	NA	43	True	ATTAAA	-29	NA	67080853	67146087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ES.9507.2	chr13	+	3180	14	NNC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-35	-107	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	75.8029991132027	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGATGTTTCTTTGT	7823	False	NA	39	True	ATTAAA	-25	NA	67080858	67146083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67140468_67140572_67142016_67142086_67143410_67143481_67145031
ES.9507.4	chr13	+	2498	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	2	924	2	272	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTGCCTGTCCATTT	7860	False	NA	37	True	AATGAA	-23	NA	67080895	67145541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ES.9507.5	chr13	+	1909	14	NNC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-48	-127	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	57.8818425096134	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAATGATCTGTCTTTG	8428	False	NA	19	True	ATTAAA	-5	NA	67081463	67146063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031_67145275_67145817
ES.9507.6	chr13	+	2359	13	NIC	ENSMUSG00000021518.5	novel	3424	13	NA	NA	-21	-134	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	58.9285702260702	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCTCATCAATGATCT	8455	False	NA	12	True	AATATA	-13	NA	67081490	67146056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_67081751_67093340_67093433_67101583_67101629_67104504_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ES.9507.7	chr13	+	1996	1	Intergenic	novelGene_7983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8411	False	NA	NA	False	NA	NA	NA	67136646	67138642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67136600_67138600
ES.9507.8	chr13	+	2425	4	NNC	ENSMUSG00000021518.5	novel	862	3	NA	NA	-1321	-118	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	98.9185972852875	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCTTTGTTAGAATGA	NA	False	NA	28	True	ATTAAA	-14	NA	67140210	67146072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67141456_67142016_67142086_67143410_67143481_67145031
ES.9508.1	chr13	-	3530	11	Fusion	ENSMUSG00000021519.12_ENSMUSG00000021520.5	novel	784	5	NA	NA	0	19	intron_retention	FALSE	canonical	3	22	junction_4	2310.74344962828	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAACGCCTACTGTCAT	424	False	NA	-6	True	AATAAA	-37	NA	67081105	67048661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.10	chr13	-	1202	7	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	129.932567981327	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTATGTATCAGCAACTA	447	False	NA	NA	False	AATAAA	-18	NA	67081082	67055031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67055248_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.11	chr13	-	2524	1	Genic_Genomic	ENSMUSG00000021519.12	novel	NA	NA	NA	NA	4271	2281	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCACAGCTATGCC	730	False	NA	NA	False	AATAAA	-14	NA	67060424	67057900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_67057900_67060400
ES.9508.12	chr13	-	1682	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	59	-262	9	262	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTGCTTGTGTGTA	436	False	NA	NA	False	NA	NA	NA	67081093	67059919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.14	chr13	-	1510	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	-10	-21	-10	21	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTTTTCTCATAATTC	367	False	NA	NA	False	AATAAA	-39	NA	67081162	67060160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.15	chr13	-	4925	2	ISM	ENSMUSG00000021519.12	ENSMUST00000173891.8	397	3	-2216	5131	814	19	5prime_fragment	FALSE	canonical	3	371	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCATTTTTCTCATAAT	NA	False	NA	NA	False	AATAAA	-37	NA	67066911	67060162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67062853_67064676
ES.9508.16	chr13	-	1458	8	FSM	ENSMUSG00000021519.12	ENSMUST00000173158.8	1415	8	-17	-26	4	18	multi-exon	FALSE	canonical	3	14	junction_6	120.714539306581	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATCATTTTTCTCATAA	381	False	NA	NA	False	AATAAA	-36	NA	67081148	67060163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
ES.9508.17	chr13	-	3629	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	14	junction_5	127.853648972392	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	440	False	NA	NA	False	AATAAA	-18	NA	67081089	67060181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076352_67077948_67078288_67080998
ES.9508.18	chr13	-	3745	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-18	0	intron_retention	FALSE	canonical	3	328	junction_5	16.739839372653	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	359	False	NA	NA	False	AATAAA	-18	NA	67081170	67060181	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.19	chr13	-	1317	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	7	1	combination_of_known_splicesites	FALSE	canonical	2	24	junction_3	122.900253141408	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAATGTTTCTGGTTTC	384	False	NA	NA	False	AATAAA	-11	NA	67081145	67060188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.2	chr13	-	4152	2	ISM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	53	-18	53	18	intron_retention	FALSE	canonical	3	5540	junction_1	0	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAAACGCCTACTGTCA	7765	False	NA	-7	True	AATAAA	-36	NA	67053389	67048662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67048891_67049465
ES.9508.20	chr13	-	2497	8	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	123.163074243634	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	435	False	NA	NA	False	AATAAA	-10	NA	67081094	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67079372_67080998
ES.9508.21	chr13	-	1475	9	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	152.041935004787	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	426	False	NA	NA	False	AATAAA	-10	NA	67081103	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67079669_67079723_67080998
ES.9508.22	chr13	-	1241	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	15	junction_4	128.800879914179	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	417	False	NA	NA	False	AATAAA	-10	NA	67081112	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67076233_67076387_67077948_67078288_67080998
ES.9508.23	chr13	-	1103	7	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	134.056476489907	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	406	False	NA	NA	False	AATAAA	-10	NA	67081123	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67080998
ES.9508.24	chr13	-	3523	6	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	1	0	intron_retention	FALSE	canonical	2	24	junction_2	130.29658475954	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	425	False	NA	NA	False	AATAAA	-10	NA	67081104	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67062853_67064676_67064749_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9508.25	chr13	-	2169	9	NNC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	172.029021897469	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	758	False	NA	NA	False	AATAAA	-10	NA	67080771	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070334_67071010_67076233_67076387_67077948_67078288_67079669_67079723_67080457
ES.9508.26	chr13	-	2997	7	NIC	ENSMUSG00000021519.12	novel	1415	8	NA	NA	-11	0	intron_retention	FALSE	canonical	3	339	junction_5	13.9164171634321	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	413	False	NA	NA	False	AATAAA	-10	NA	67081116	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67078288_67080998
ES.9508.27	chr13	-	1512	9	NNC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	167.885377564575	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	424	False	NA	NA	False	AATAAA	-10	NA	67081105	67060189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070819_67071010_67076233_67076387_67077043_67077137_67077948_67078288_67080998
ES.9508.3	chr13	-	508	4	NNC	ENSMUSG00000021520.5	novel	535	4	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	2419.34017634745	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7748	False	NA	-25	True	AATAAA	-18	NA	67053406	67048680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67048891_67049456_67049633_67050793_67050866_67053356
ES.9508.4	chr13	-	4708	1	NIC	ENSMUSG00000021520.5	novel	535	4	NA	NA	54	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7766	False	NA	-25	True	AATAAA	-18	NA	67053388	67048680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67048700_67053400
ES.9508.5	chr13	-	5628	9	Fusion	ENSMUSG00000021519.12_ENSMUSG00000021520.5	novel	784	5	NA	NA	265	-3	intron_retention	FALSE	canonical	3	22	junction_3	2294.99433550499	499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTGGATTATTTGAATT	3506	False	NA	-28	True	AATAAA	-15	NA	67078023	67048683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67048891_67049465_67049633_67050793_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948
ES.9508.6	chr13	-	1054	3	NIC	ENSMUSG00000021520.5	novel	535	4	NA	NA	53	-3	intron_retention	FALSE	canonical	3	4784	junction_2	427.5	342	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTGGATTATTTGAATT	7765	False	NA	-28	True	AATAAA	-15	NA	67053389	67048683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67049633_67050793_67050866_67053356
ES.9508.7	chr13	-	4308	1	Genic_Genomic	ENSMUSG00000021519.12	novel	NA	NA	NA	NA	5733	377	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACTATCGAGTCATAGT	2192	False	NA	NA	False	AATAAA	-32	NA	67058962	67054654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_67054700_67059000
ES.9508.8	chr13	-	1991	8	NIC	ENSMUSG00000021519.12	novel	1092	5	NA	NA	-39	357	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	151.570284094239	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	718	False	NA	NA	False	AATAAA	-12	NA	67080811	67054674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080457
ES.9508.9	chr13	-	1394	8	NIC	ENSMUSG00000021519.12	novel	784	5	NA	NA	-6	1	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	116.048898912379	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATGTATCAGCAACTAA	418	False	NA	NA	False	AATAAA	-19	NA	67081111	67055030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67055248_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ES.9509.1	chr13	-	176	1	Intergenic	novelGene_7982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGTAAAAAAAAAA	8063	False	NA	NA	False	NA	NA	NA	67100514	67100338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67100300_67100500
ES.951.1	chr1	+	1958	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGTGCCAATTTTGTA	NA	False	NA	NA	False	NA	NA	NA	87381547	87383505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87381500_87383500
ES.9510.1	chr13	-	4198	5	Antisense	novelGene_ENSMUSG00000021518.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGACAAATGGAC	NA	False	NA	NA	False	NA	NA	NA	67135879	67112909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_67114606_67120557_67120697_67122505_67122620_67124807_67126991_67135813
ES.9511.1	chr13	+	3064	1	Antisense	novelGene_ENSMUSG00000114362.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCATTGTCCTGAGA	NA	False	NA	NA	False	NA	NA	NA	67154805	67157869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_67154800_67157900
ES.9512.1	chr13	-	3559	5	NNC	ENSMUSG00000090641.3	novel	3968	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	4.7169905660283	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTGCTTTTCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	67209235	67186659	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67187303_67187695_67190297_67192821_67192918_67200350_67200461_67209126
ES.9512.3	chr13	-	2955	4	FSM	ENSMUSG00000090641.3	ENSMUST00000167565.3	3968	4	16	997	16	-997	multi-exon	FALSE	canonical	1	1	junction_3	4.10960933531265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTTTATTGGATAGC	NA	False	NA	NA	False	AATAAA	-15	NA	67209218	67187656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67190297_67192821_67192918_67200350_67200478_67209126
ES.9513.1	chr13	-	171	1	Intergenic	novelGene_7984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	67209941	67209770	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67209800_67209900
ES.9514.1	chr13	+	1787	2	NNC	ENSMUSG00000114516.2	novel	1536	2	NA	NA	30387	3647	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAACA	376	False	NA	NA	False	AAAAAG	-14	NA	67239677	67243753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67240596_67242884
ES.9515.1	chr13	-	4737	1	Genic_Genomic	ENSMUSG00000058883.17_ENSMUSG00000100235.9	novel	NA	NA	NA	NA	7831	454	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67221745	67217008	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_67217000_67221700
ES.9515.10	chr13	-	2791	4	NIC	ENSMUSG00000074824.4	novel	2981	7	NA	NA	5442	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	2.94392028877595	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACACATCAGTGTTTTC	NA	False	NA	NA	False	AATAAA	-25	NA	67256650	67244677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67247112_67250106_67250200_67250761_67250888_67256512
ES.9515.11	chr13	-	3122	1	NIC	ENSMUSG00000100235.9	novel	3886	7	NA	NA	16	-43	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAACAAATGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	67256597	67253475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67253500_67256600
ES.9515.2	chr13	-	4063	8	NNC	ENSMUSG00000100235.9	novel	3886	7	NA	NA	40	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.94871659305393	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAGTGTCGTGTTTAGTA	NA	False	NA	2	True	AATAAA	-21	NA	67256573	67217461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250888_67254202_67254377_67256512
ES.9515.3	chr13	-	3952	7	FSM	ENSMUSG00000100235.9	ENSMUST00000186303.7	3886	7	-66	0	-11	0	multi-exon	FALSE	canonical	1	2	junction_1	5.63964143856288	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67256679	67217462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250846_67256512
ES.9515.4	chr13	-	2491	5	NNC	ENSMUSG00000058883.17	novel	2406	4	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.54983443527075	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	False	NA	-5	True	AATAAA	-14	NA	67229608	67217468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67219593_67222149_67222246_67222896_67222981_67223955_67224048_67229513
ES.9515.5	chr13	-	4018	8	NNC	ENSMUSG00000100235.9	novel	3886	7	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.64963426665291	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	False	NA	-5	True	AATAAA	-14	NA	67256650	67217468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67219593_67222149_67222246_67222896_67222981_67240481_67240584_67245856_67247112_67250106_67250200_67250761_67250888_67256512
ES.9515.6	chr13	-	2699	1	Intergenic	novelGene_7985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGGAAGGAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	67233419	67230720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67230700_67233400
ES.9515.7	chr13	-	7689	4	Fusion	ENSMUSG00000058883.17_ENSMUSG00000100235.9	novel	346	3	NA	NA	9	9953	intron_retention	FALSE	canonical	3	7	junction_1	1.63299316185545	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTCGAAGGTTAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	67256649	67240130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67240584_67245856_67247112_67250106_67250200_67250761
ES.9515.8	chr13	-	4352	5	NNC	ENSMUSG00000074824.4	novel	2981	7	NA	NA	5450	4531	intron_retention	FALSE	canonical	2	4	junction_4	2.58602010819715	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACAATATTAAAATACT	NA	False	NA	NA	False	NA	NA	NA	67256642	67240145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67240584_67245856_67247112_67250106_67250200_67250761_67250888_67254202
ES.9515.9	chr13	-	4033	3	Fusion	ENSMUSG00000058883.17_ENSMUSG00000100235.9	novel	346	3	NA	NA	4105	9876	intron_retention	FALSE	canonical	3	7	junction_1	1	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATATAAATATAAATAT	NA	False	NA	NA	False	NA	NA	NA	67252508	67240207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67240584_67245856_67247112_67250106
ES.9516.1	chr13	+	3016	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	-36	502	-35	-502	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCAGACTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	67276255	67289349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ES.9516.10	chr13	+	1721	4	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-48	-840	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	9.80929264637478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTCTAGAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	67321197	67331268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67321240_67324511_67324639_67325128_67325225_67329812
ES.9516.11	chr13	+	3037	5	Fusion	ENSMUSG00000058900.6_ENSMUSG00000051037.16	novel	2591	4	NA	NA	-22	-178	multi-exon	TRUE	non_canonical	0	0	junction_4	11.146748404804	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTTGGTCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	67321223	67357184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_67321240_67324511_67324639_67325128_67325225_67329812_67332566_67357139
ES.9516.12	chr13	+	3259	6	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.4647285183732	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGAACATTGTATCTC	NA	False	NA	NA	False	AATAAA	-19	NA	67321223	67332102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67321240_67323101_67323723_67323819_67323929_67324511_67324639_67325128_67325225_67329812
ES.9516.13	chr13	+	2838	6	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-20	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4647285183732	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGAACATTGTATCTC	NA	False	NA	NA	False	AATAAA	-19	NA	67321225	67332102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67321318_67322873_67322980_67323101_67323229_67324511_67324639_67325128_67325225_67329812
ES.9516.14	chr13	+	2700	5	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1526746027366	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATTGTATCTCATCTT	NA	False	NA	NA	False	AATAAA	-24	NA	67321241	67332107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67321318_67322873_67322980_67324511_67324639_67325128_67325225_67329812
ES.9516.15	chr13	+	1746	4	FSM	ENSMUSG00000058900.6	ENSMUST00000225334.2	397	4	24	-1373	24	-859	multi-exon	FALSE	canonical	3	9	junction_1	8.28653526310404	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGATTGGTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	67321286	67331249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67321373_67324511_67324639_67325128_67325225_67329812
ES.9516.16	chr13	+	2389	5	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	-48	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.58602010819715	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGGTTTATTATTAT	NA	False	NA	11	True	AATAAA	-16	NA	67342521	67357359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962_67355077_67355444
ES.9516.17	chr13	+	2744	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	-33	1	-33	-1	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGTTTATTATTATTA	NA	False	NA	13	True	AATAAA	-18	NA	67342536	67357361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
ES.9516.18	chr13	+	2545	3	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	227	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGTTTATTATTATTA	NA	False	NA	13	True	AATAAA	-18	NA	67342825	67357361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67342876_67347212_67347309_67354962
ES.9516.19	chr13	+	2670	4	NNC	ENSMUSG00000051037.16	novel	2712	4	NA	NA	227	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGGTTTATTATTAT	NA	False	NA	11	True	AATAAA	-16	NA	67342825	67357359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67342876_67346596_67346724_67347212_67347309_67354962
ES.9516.2	chr13	+	4133	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	-34	-617	-33	617	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGGTTTGGTGTCT	NA	False	NA	NA	False	NA	NA	NA	67276257	67290468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ES.9516.3	chr13	+	7976	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	-27	-4467	-26	4467	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGCATTAATATATTT	NA	False	NA	NA	False	NA	NA	NA	67276264	67294318	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ES.9516.4	chr13	+	3580	5	NNC	ENSMUSG00000057396.8	novel	3482	4	NA	NA	-21	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.08503365959205	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTTTGCATTTTATG	NA	False	NA	NA	False	AATAAA	-20	NA	67276269	67289849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67276379_67278701_67278780_67284781_67284909_67285373_67285470_67286679
ES.9516.5	chr13	+	3482	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGCATTTTATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	67276291	67289851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ES.9516.6	chr13	+	6560	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	32	-3110	32	3110	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	67276323	67292961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ES.9516.7	chr13	+	2634	1	Antisense	novelGene_ENSMUSG00000114568.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATCTAAACTTTTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	67292769	67295403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_67292800_67295400
ES.9516.8	chr13	+	8973	3	Intergenic	novelGene_7986	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAGATTCTCCCCCAA	NA	False	NA	NA	False	AATAAA	-13	NA	67294212	67337202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67303014_67334867_67334982_67337144
ES.9516.9	chr13	+	2449	4	NNC	ENSMUSG00000058900.6	novel	2591	4	NA	NA	-66	-130	at_least_one_novel_splicesite	TRUE	canonical	3	5	junction_1	9.80929264637478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATCTGCACTGGTTC	NA	False	NA	NA	False	GATAAA	-22	NA	67321179	67331978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67321240_67324511_67324639_67325128_67325225_67329812
ES.9517.1	chr13	-	180	1	Intergenic	novelGene_7987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATTCTCAACTGTAA	NA	False	NA	NA	False	NA	NA	NA	67322308	67322128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67322100_67322300
ES.9518.1	chr13	+	179	1	Intergenic	novelGene_7988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	67377044	67377223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67377000_67377200
ES.9519.1	chr13	+	3035	3	NNC	ENSMUSG00000114442.2	novel	4257	2	NA	NA	-9339	-1450	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAACAGGTGATCAGTG	NA	False	NA	NA	False	GATAAA	-34	NA	67417301	67429975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67417412_67426426_67426670_67427293
ES.9519.2	chr13	+	2736	2	FSM	ENSMUSG00000114442.2	ENSMUST00000224844.2	4257	2	5	1516	5	-1516	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTGAGTGAGCAGGATT	NA	False	NA	NA	False	AATAAA	-16	NA	67426645	67429909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67426670_67427197
ES.9519.3	chr13	+	4916	2	ISM	ENSMUSG00000114442.2	ENSMUST00000224856.2	3162	4	1	-539	1	539	intron_retention	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGATTGGCTCCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	67426660	67431964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_67426810_67427197
ES.9519.4	chr13	+	2771	2	NNC	ENSMUSG00000114442.2	novel	3162	4	NA	NA	31	-1480	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAAGCTATTTGGGACC	NA	False	NA	NA	False	GATAAA	-4	NA	67426690	67429945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67426810_67427293
ES.9519.5	chr13	+	3551	4	NNC	ENSMUSG00000114442.2	novel	3162	4	NA	NA	53	538	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGATTGGCTCCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	67426712	67431963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67426810_67427293_67428590_67429035_67429261_67430030
ES.952.1	chr1	-	2942	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	-199	3	-199	-3	multi-exon	FALSE	canonical	1	2	junction_2	3.91578004149024	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAGGTAGAGACCTA	NA	False	NA	NA	False	NA	NA	NA	87438283	87404558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ES.952.2	chr1	-	2453	12	ISM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	32	1619	32	232	5prime_fragment	FALSE	canonical	1	2	junction_1	3.89107901073322	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACCTGAGAACAAAGG	NA	False	NA	NA	False	NA	NA	NA	87438052	87406174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ES.9520.1	chr13	-	5287	7	Fusion	ENSMUSG00000055480.8_ENSMUSG00000114771.2	novel	3485	4	NA	NA	-39	166	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATGCCCAATTTCT	NA	False	NA	NA	False	AGTAAA	-10	NA	67426569	67374894	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67376180_67376418_67376487_67377931_67378271_67402943_67406209_67407624_67407721_67408180_67408308_67426462
ES.9520.2	chr13	-	5202	4	FSM	ENSMUSG00000055480.8	ENSMUST00000045969.8	3488	4	-41	-1673	30	1673	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTTGAGCAAGTGCCT	4255	False	NA	NA	False	NA	NA	NA	67417173	67401308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67406209_67407624_67407721_67408180_67408308_67417094
ES.9520.3	chr13	-	179	1	Intergenic	novelGene_7989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATCTATTATGTCTA	NA	False	NA	NA	False	NA	NA	NA	67408821	67408642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67408600_67408800
ES.9521.1	chr13	-	171	1	Antisense	novelGene_ENSMUSG00000114442.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67427937	67427766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_67427800_67427900
ES.9522.1	chr13	+	4889	2	Antisense	novelGene_ENSMUSG00000069206.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCATGACAAAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	67569571	67575735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_67569619_67570893
ES.9523.1	chr13	-	5390	5	NNC	ENSMUSG00000055341.11	novel	1881	3	NA	NA	11	1	intron_retention	TRUE	non_canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGGAGTATCATT	NA	False	NA	NA	False	NA	NA	NA	67454520	67436200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67439814_67440686_67441674_67441757_67442345_67443810_67443907_67454413
ES.9523.10	chr13	-	5415	5	Fusion	ENSMUSG00000057842.15_ENSMUSG00000098692.2	novel	3896	5	NA	NA	-15388	0	intron_retention	FALSE	canonical	2	3	junction_1	8.27647267862342	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACACAAAACTCAGTT	4459	False	NA	NA	False	NA	NA	NA	67496022	67461061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67466042_67468335_67468432_67468891_67469019_67493413_67493510_67495906
ES.9523.11	chr13	-	4648	6	NIC	ENSMUSG00000098781.2	novel	551	6	NA	NA	-17	4221	intron_retention	FALSE	canonical	1	1	junction_1	10.2254584249314	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTATAGATTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	67508672	67461784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67461963_67464361_67468432_67468891_67469019_67493413_67493510_67495906_67496034_67508622
ES.9523.12	chr13	-	3898	4	FSM	ENSMUSG00000057842.15	ENSMUST00000168892.9	4040	4	-23	165	-23	-165	multi-exon	FALSE	canonical	2	3	junction_1	2.05480466765633	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTCATGGTTTGATG	3590	False	NA	-3	True	NA	NA	NA	67480657	67462493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67466042_67468335_67468432_67468891_67469019_67480530
ES.9523.13	chr13	-	4033	5	NNC	ENSMUSG00000057842.15	novel	4040	4	NA	NA	-40	-171	intron_retention	FALSE	canonical	0	0	junction_3	3.26917420765551	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGGATTGTCATGGT	3573	False	NA	-9	True	NA	NA	NA	67480674	67462499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67466042_67468335_67468432_67468891_67469019_67470145_67470270_67480530
ES.9523.14	chr13	-	5520	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-26	-817	-26	817	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGTGGAACCATTCC	NA	False	NA	NA	False	NA	NA	NA	67508750	67486552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
ES.9523.15	chr13	-	4694	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-17	0	-17	0	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGGCTGGAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	67508741	67487369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
ES.9523.17	chr13	-	4723	5	NNC	ENSMUSG00000098905.3	novel	4677	4	NA	NA	17	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	9.12071817347735	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGCTGAGGCTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	67508707	67487373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67491722_67493413_67493510_67495906_67496034_67496247_67496315_67508622
ES.9523.18	chr13	-	2104	1	ISM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	17374	1877	17374	-1877	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGCAGTTTTAATCAT	9131	False	NA	NA	False	NA	NA	NA	67491350	67489246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67489200_67491400
ES.9523.19	chr13	-	2046	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	-26	2657	-26	-2657	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACATCTTAATACTTCT	NA	False	NA	NA	False	ATTAAA	-33	NA	67508750	67490026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
ES.9523.2	chr13	-	5496	6	Fusion	ENSMUSG00000055341.11_ENSMUSG00000055560.9	novel	2117	4	NA	NA	-10	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.4	120	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGTCTGGAGTATCAT	NA	False	NA	NA	False	NA	NA	NA	67569547	67436201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67439814_67440686_67441674_67441757_67442345_67443810_67443907_67444368_67444496_67569460
ES.9523.20	chr13	-	4161	4	NIC	ENSMUSG00000078995.11	novel	4126	4	NA	NA	12	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	11.323525167642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATGGGGCCTTATTG	2240	False	NA	NA	False	NA	NA	NA	67523917	67511699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67515485_67520295_67520392_67520869_67520997_67523764
ES.9523.21	chr13	-	4116	4	FSM	ENSMUSG00000078995.11	ENSMUST00000057070.9	4126	4	10	0	10	0	multi-exon	FALSE	canonical	2	8	junction_1	8.33999733546453	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGAAATGGGGCCTTA	2238	False	NA	NA	False	NA	NA	NA	67523919	67511702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67515485_67520295_67520392_67520869_67520997_67523808
ES.9523.22	chr13	-	3484	5	NNC	ENSMUSG00000078995.11	novel	4126	4	NA	NA	3	-2199	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	10.3531396204243	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTTTGTAAAATTATC	2231	False	NA	NA	False	GATAAA	-11	NA	67523926	67513901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67515485_67520295_67520392_67520869_67521340_67521377_67522595_67523808
ES.9523.23	chr13	-	4011	4	NNC	ENSMUSG00000078995.11	novel	4126	4	NA	NA	48	-2596	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.0855260988773	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGTGTGGTAAAAAACGA	2276	False	NA	NA	False	AATAAA	-15	NA	67523881	67514298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67517452_67519733_67520392_67520869_67520997_67523808
ES.9523.24	chr13	-	2285	6	NNC	ENSMUSG00000078994.10	novel	2056	4	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	13.979985693841	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTTTGCTTCAAAGC	5229	False	NA	NA	False	AATAAA	-25	NA	67547908	67537422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67539184_67544162_67544259_67544748_67544876_67545381_67545490_67545583_67545683_67547814
ES.9523.25	chr13	-	1751	4	FSM	ENSMUSG00000078994.10	ENSMUST00000109732.3	2056	4	-1	306	-1	-301	multi-exon	FALSE	canonical	2	4	junction_3	14.7196014438797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTAGAGACTTGTTCC	5250	False	NA	NA	False	NA	NA	NA	67547887	67537728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67539184_67544162_67544259_67544748_67544876_67547814
ES.9523.26	chr13	-	1698	4	FSM	ENSMUSG00000078994.10	ENSMUST00000224825.2	379	4	25	-1344	25	-302	multi-exon	TRUE	canonical	1	2	junction_3	15.4128373622625	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTCTAGAGACTTGTTC	5224	False	NA	NA	False	NA	NA	NA	67547913	67537729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67539184_67544162_67544259_67544748_67544876_67547892
ES.9523.27	chr13	-	1784	5	NNC	ENSMUSG00000078994.10	novel	379	4	NA	NA	-22	-310	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	15.5302124904974	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTATGAGCTTCTAGAG	5229	False	NA	NA	False	NA	NA	NA	67547908	67537737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67539184_67544162_67544259_67544748_67544876_67545583_67545683_67547892
ES.9523.28	chr13	-	3990	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	28	-684	9	684	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCAGATGAATATCATTT	NA	False	NA	NA	False	AATAAA	-25	NA	67569509	67553143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ES.9523.29	chr13	-	3430	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	-100	4	-100	-4	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTTAATTTGTGTAAA	NA	False	NA	-8	True	NA	NA	NA	67569637	67553831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ES.9523.3	chr13	-	5527	6	NNC	ENSMUSG00000055341.11	novel	2117	4	NA	NA	-5	0	intron_retention	FALSE	non_canonical	0	0	junction_1	0.4	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTATTTGAGTCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	67454536	67436206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67439814_67440686_67441674_67441757_67442345_67443810_67443907_67444368_67444496_67454413
ES.9523.30	chr13	-	1781	5	NNC	ENSMUSG00000055560.9	novel	3334	4	NA	NA	-22	-18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.6339261751398	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAGTTTAAAATAACC	NA	False	NA	-22	True	NA	NA	NA	67569559	67553845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67554718_67556274_67556862_67561226_67561323_67561952_67562080_67569460
ES.9523.31	chr13	-	1539	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	-55	1850	-55	905	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAGTGTGATAAAGCC	NA	False	NA	-25	True	NA	NA	NA	67569592	67555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ES.9523.32	chr13	-	1398	4	FSM	ENSMUSG00000055560.9	ENSMUST00000223644.2	441	4	24	-981	-11	905	multi-exon	FALSE	canonical	0	0	junction_3	17.8200885394982	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAGTGTGATAAAGCC	NA	False	NA	-25	True	NA	NA	NA	67569494	67555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67556862_67561226_67561323_67561952_67562037_67569460
ES.9523.33	chr13	-	1675	5	NNC	ENSMUSG00000055560.9	novel	646	4	NA	NA	-9	905	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	18.060661671157	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAGTGTGATAAAGCC	NA	False	NA	-25	True	NA	NA	NA	67569546	67555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67556862_67561226_67561323_67561952_67562080_67564503_67564565_67569339
ES.9523.34	chr13	-	6044	2	NNC	ENSMUSG00000055560.9	novel	504	3	NA	NA	6966	905	intron_retention	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAGTGTGATAAAGCC	NA	False	NA	-25	True	NA	NA	NA	67562517	67555677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67556970_67557765
ES.9523.35	chr13	-	1422	4	NNC	ENSMUSG00000055560.9	novel	3334	4	NA	NA	140	823	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	15.6276108929747	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGCCTCTATTAAGTG	NA	False	NA	-107	True	NA	NA	NA	67569343	67555759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67556862_67561226_67561323_67561952_67562080_67569246
ES.9523.36	chr13	-	4719	3	FSM	ENSMUSG00000055560.9	ENSMUST00000224496.2	504	3	-176	-4039	-166	-315	multi-exon	FALSE	canonical	3	38	junction_2	2.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGAGTTAATGTCTTCT	NA	False	NA	NA	False	AATATA	-27	NA	67569703	67556973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67561323_67561952_67562080_67569460
ES.9523.37	chr13	-	3704	4	NNC	ENSMUSG00000055560.9	novel	504	3	NA	NA	-22	-317	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.2006944318862	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATATGAGTTAATGTCTT	NA	False	NA	NA	False	AATATA	-25	NA	67569559	67556975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67558562_67559430_67561323_67561952_67562080_67569460
ES.9523.38	chr13	-	3817	3	NNC	ENSMUSG00000055560.9	novel	504	3	NA	NA	193	-1018	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	19	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCGTCATTTTATTGCCA	NA	False	NA	NA	False	NA	NA	NA	67569290	67557676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67561323_67561952_67562080_67569246
ES.9523.39	chr13	-	451	3	FSM	ENSMUSG00000055560.9	ENSMUST00000224496.2	504	3	-14	67	-4	-67	multi-exon	FALSE	canonical	3	38	junction_2	2.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGTTTAAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	67569541	67561079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67561323_67561952_67562080_67569460
ES.9523.4	chr13	-	5163	1	Genic_Genomic	ENSMUSG00000114863.2_ENSMUSG00000057842.15	novel	NA	NA	NA	NA	3232	-1375	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGCTTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	67461935	67456772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_67456800_67461900
ES.9523.5	chr13	-	5853	5	NNC	ENSMUSG00000057842.15	novel	4040	4	NA	NA	-3	509	intron_retention	FALSE	canonical	0	0	junction_3	3.26917420765551	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTGTGGATTTTTCC	3680	False	NA	NA	False	NA	NA	NA	67480567	67460552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67466042_67468335_67468432_67468891_67469019_67470165_67470270_67480530
ES.9523.6	chr13	-	5821	5	Fusion	ENSMUSG00000098905.3_ENSMUSG00000057842.15	novel	4040	4	NA	NA	-12	504	intron_retention	TRUE	non_canonical	0	0	junction_4	2.91547594742265	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCATCTTTGTGGATT	NA	False	NA	NA	False	NA	NA	NA	67508736	67460557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67466042_67468335_67468432_67468891_67469019_67480530_67480540_67508631
ES.9523.7	chr13	-	5118	1	Genic_Genomic	ENSMUSG00000057842.15_ENSMUSG00000098781.2	novel	NA	NA	NA	NA	-999	13	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTTAAAATGTTTATGT	NA	False	NA	NA	False	NA	NA	NA	67466166	67461048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_67461000_67466200
ES.9523.8	chr13	-	6626	7	NNC	ENSMUSG00000098781.2	novel	551	6	NA	NA	-65	4944	intron_retention	FALSE	canonical	2	3	junction_1	9.28708781050335	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACACAAAACTCAGTT	NA	False	NA	NA	False	NA	NA	NA	67508720	67461061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67466042_67468335_67468432_67468891_67469019_67490619_67491722_67493413_67493510_67495906_67496034_67508622
ES.9523.9	chr13	-	5288	9	NNC	ENSMUSG00000098781.2	novel	551	6	NA	NA	-48	4944	intron_retention	FALSE	canonical	0	0	junction_8	7.1140266375661	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACACAAAACTCAGTT	NA	False	NA	NA	False	NA	NA	NA	67508703	67461061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67462974_67464361_67466042_67468335_67468432_67468891_67469019_67490619_67491722_67493413_67493510_67495906_67496034_67496247_67496315_67508622
ES.9524.1	chr13	-	1050	6	NNC	ENSMUSG00000069206.15	novel	483	5	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	48.3842949726458	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAAGATTGGTGTCTGCT	9929	False	NA	0	True	NA	NA	NA	67599752	67588555	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67588653_67589775_67590030_67591099_67591454_67596939_67597036_67597468_67597596_67599630
ES.9525.1	chr13	+	201	1	FSM	ENSMUSG00000103398.2	ENSMUST00000195630.2	1840	1	1639	0	1639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGATATGTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	67601415	67601616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67601400_67601600
ES.9526.1	chr13	+	5450	1	Antisense	novelGene_ENSMUSG00000097565.2_AS_novelGene_ENSMUSG00000071291.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATTTGTAGGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	67634545	67639995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_67634500_67640000
ES.9527.1	chr13	-	3429	5	NNC	ENSMUSG00000059839.10	novel	596	4	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.83739716558867	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCGTGTGGTTTG	5451	False	NA	-1	True	NA	NA	NA	67632337	67619632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67621214_67621532_67623071_67629288_67629382_67629837_67629977_67632259
ES.9527.10	chr13	-	2501	6	FSM	ENSMUSG00000097565.2	ENSMUST00000167914.2	1520	6	0	-981	0	981	multi-exon	FALSE	canonical	1	2	junction_3	17.7268158449283	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTTGTCTTTGGTCATG	9248	False	NA	-4	True	NA	NA	NA	67674270	67638289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67668744_67668841_67669311_67669439_67674195
ES.9527.11	chr13	-	695	4	NNC	ENSMUSG00000097333.8	novel	382	2	NA	NA	-8	6279	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.1187120819429	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTAGATGAATGTATG	9214	False	NA	NA	False	AATAAA	-17	NA	67674304	67657620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67657984_67668744_67668841_67669311_67669439_67674195
ES.9527.12	chr13	-	5469	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	30	-2843	-1	2843	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTTGTCCACTTTCTG	9252	False	NA	NA	False	ATTAAA	-23	NA	67674266	67661056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ES.9527.13	chr13	-	4321	4	NNC	ENSMUSG00000097333.8	novel	2656	4	NA	NA	2	1732	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5612821717283	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACTAAAGGTTGGCTA	9224	False	NA	NA	False	NA	NA	NA	67674294	67662167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67666167_67668744_67668841_67669311_67669439_67674195
ES.9527.14	chr13	-	4190	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	24	-1558	-7	1558	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGGGATACTTTAACT	9246	False	NA	NA	False	NA	NA	NA	67674272	67662341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ES.9527.15	chr13	-	2676	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9202	False	NA	NA	False	NA	NA	NA	67674316	67663899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ES.9527.2	chr13	-	4099	4	NNC	ENSMUSG00000059839.10	novel	3744	4	NA	NA	866	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	7.54247233265651	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCGTGTGGTTTG	6323	False	NA	-1	True	NA	NA	NA	67631465	67619632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67620445_67627542_67629382_67629837_67631100_67631279
ES.9527.3	chr13	-	3711	4	NIC	ENSMUSG00000059839.10	novel	3744	4	NA	NA	-15	-1	intron_retention	FALSE	canonical	0	0	junction_3	6.59966329107444	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGTTCGTGTGGTTTG	5396	False	NA	-1	True	NA	NA	NA	67632392	67619632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67623071_67629288_67629382_67629837_67629965_67632339
ES.9527.4	chr13	-	3736	4	FSM	ENSMUSG00000059839.10	ENSMUST00000019572.9	3744	4	5	3	5	-3	multi-exon	FALSE	canonical	3	10	junction_1	2.44948974278318	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGGTGTTCGTGTGGTT	5449	False	NA	-3	True	NA	NA	NA	67632339	67619634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67623071_67629288_67629382_67629837_67629965_67632259
ES.9527.5	chr13	-	3256	5	NNC	ENSMUSG00000059839.10	novel	3744	4	NA	NA	3	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6.83739716558867	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGGTGTTCGTGTGG	5419	False	NA	-5	True	NA	NA	NA	67632369	67619636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67621162_67621589_67623071_67629288_67629382_67629837_67629965_67632339
ES.9527.6	chr13	-	3276	7	Fusion	ENSMUSG00000071291.11_ENSMUSG00000059839.10	novel	613	5	NA	NA	16	-821	intron_retention	FALSE	canonical	0	0	junction_3	17.5467629176691	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCAGAAAGTGTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	67648590	67620452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67623071_67629288_67629382_67629837_67629965_67640155_67640270_67642125_67642222_67642721_67642849_67648489
ES.9527.7	chr13	-	3670	3	ISM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	4310	1	4251	0	3prime_fragment	FALSE	canonical	3	42	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	-1	True	NA	NA	NA	67644312	67638286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67640270_67642125_67642222_67642721
ES.9527.8	chr13	-	2366	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	23	2	23	-2	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	False	NA	-3	True	NA	NA	NA	67648651	67638288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
ES.9527.9	chr13	-	2286	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	11	3	-5	-2	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	False	NA	-3	True	NA	NA	NA	67648611	67638288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
ES.9528.1	chr13	+	175	1	Intergenic	novelGene_7990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATAGAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	67678077	67678252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67678100_67678300
ES.9529.1	chr13	+	163	1	Intergenic	novelGene_7991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATCTTTGGGCCAGA	NA	False	NA	NA	False	NA	NA	NA	67691770	67691933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67691800_67691900
ES.953.1	chr1	+	4183	27	FSM	ENSMUSG00000026288.15	ENSMUST00000169754.8	4937	27	-39	793	-39	20	multi-exon	FALSE	canonical	1	2	junction_3	193.725271374776	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTAAGTGCTTTAT	NA	False	NA	22	True	NA	NA	NA	87547994	87647436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.10	chr1	+	4374	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-112	1	intron_retention	FALSE	canonical	0	0	junction_9	115.184698372783	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9258	False	NA	20	True	AATAAA	-21	NA	87603848	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626978_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.100	chr1	+	8006	5	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-2960	-6	intron_retention	FALSE	canonical	3	491	junction_2	34.9106001094224	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAACAGTCAGGT	7417	False	NA	-4	True	NA	NA	NA	87634102	87647410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87638875_87639752_87639903_87640914_87643036_87645411_87646007_87647042
ES.953.101	chr1	+	4837	7	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-2903	-6	intron_retention	FALSE	canonical	3	491	junction_3	30.6684782073639	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAACAGTCAGGT	7474	False	NA	-4	True	NA	NA	NA	87634159	87647410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.102	chr1	+	4938	7	NIC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	-2185	0	intron_retention	FALSE	canonical	3	491	junction_3	30.6684782073639	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	8192	False	NA	19	True	AATAAA	-20	NA	87634877	87648229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.103	chr1	+	3375	2	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	5960	17	intron_retention	FALSE	canonical	3	579	junction_1	0	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	1846	False	NA	19	True	NA	NA	NA	87643022	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87646007_87647042
ES.953.11	chr1	+	4199	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-67	-7	-67	2	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGTGTGGTATCT	9303	False	NA	21	True	AATAAA	-22	NA	87603893	87648231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.12	chr1	+	3585	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-56	596	-56	212	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGCTAAGTGGCACAA	9314	False	NA	NA	False	NA	NA	NA	87603904	87647628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.13	chr1	+	4001	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	-53	-6	-53	1	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9317	False	NA	20	True	AATAAA	-21	NA	87603907	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.14	chr1	+	3191	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	-40	791	-40	17	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	9330	False	NA	19	True	NA	NA	NA	87603920	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.15	chr1	+	3205	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-38	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	112.913052558225	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTGCTGTGTTAAGTG	9332	False	NA	16	True	NA	NA	NA	87603922	87647430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642979_87643036_87645411_87646007_87647042
ES.953.16	chr1	+	3345	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	-33	630	-33	178	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCCGGGCTCTACTGCAG	9337	False	NA	NA	False	ATTAAA	-27	NA	87603927	87647594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.17	chr1	+	3129	22	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-33	18	combination_of_known_splicesites	FALSE	canonical	3	12	junction_19	112.00904968298	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9337	False	NA	20	True	NA	NA	NA	87603927	87647434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642998_87643036_87645411_87646007_87647042
ES.953.18	chr1	+	4678	21	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-30	3	intron_retention	FALSE	canonical	3	377	junction_4	51.6230568641571	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACTGTGTGGTATCTT	9340	False	NA	22	True	AATAAA	-23	NA	87603930	87648232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.19	chr1	+	3186	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-21	16	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_14	126.901414524285	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGTGTTAAGTGCT	9349	False	NA	18	True	NA	NA	NA	87603939	87647432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.2	chr1	+	4106	27	NNC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	-17	17	intron_retention	FALSE	canonical	0	0	junction_18	206.102666580512	753	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	NA	False	NA	19	True	NA	NA	NA	87548060	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630914_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.20	chr1	+	3967	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-12	-2	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_14	126.901414524285	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCCTCCTGACTGT	9358	False	NA	12	True	AATAAA	-13	NA	87603948	87648222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.21	chr1	+	4156	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-10	1	intron_retention	FALSE	canonical	3	20	junction_14	111.749131901441	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9360	False	NA	20	True	AATAAA	-21	NA	87603950	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.22	chr1	+	6206	21	NIC	ENSMUSG00000026288.15	novel	4880	27	NA	NA	-8	0	intron_retention	FALSE	canonical	3	377	junction_4	53.6445710207473	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	9362	False	NA	15	True	AATAAA	-16	NA	87603952	87648225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.23	chr1	+	5902	19	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-6	1	intron_retention	FALSE	canonical	2	13	junction_13	121.251804110289	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9364	False	NA	20	True	AATAAA	-21	NA	87603954	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87637339_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.24	chr1	+	3193	21	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-1	3	intron_retention	FALSE	canonical	0	0	junction_1	147.888564466628	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGGTGCCATGTGC	9369	False	NA	5	True	NA	NA	NA	87603959	87647419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.26	chr1	+	5878	21	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	1	1	intron_retention	FALSE	canonical	3	377	junction_4	52.1876182633391	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9371	False	NA	20	True	AATAAA	-21	NA	87603961	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87643036_87645411_87646007_87647042
ES.953.27	chr1	+	4461	22	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	1	0	intron_retention	FALSE	canonical	3	151	junction_19	87.4057704472822	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9371	False	NA	19	True	AATAAA	-20	NA	87603961	87648229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.28	chr1	+	3319	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	1	171	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_14	126.901414524285	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAACCGGCCGGGCTCT	9371	False	NA	NA	False	ATTAAA	-20	NA	87603961	87647587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.29	chr1	+	792	1	NIC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	1	9039	mono-exon	FALSE	NA	NA	NA	NA	NA	528	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9371	False	NA	NA	False	NA	NA	NA	87603961	87604753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604000_87604800
ES.953.3	chr1	+	4728	28	FSM	ENSMUSG00000026288.15	ENSMUST00000168783.8	3854	28	-60	-814	-17	1	multi-exon	FALSE	canonical	1	2	junction_3	195.454315825361	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	NA	False	NA	20	True	AATAAA	-21	NA	87548060	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.30	chr1	+	3500	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	1	169	intron_retention	FALSE	canonical	3	20	junction_14	111.749131901441	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGCTAACCGGCCGGGCT	9371	False	NA	NA	False	ATTAAA	-18	NA	87603961	87647585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.32	chr1	+	4002	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	6	-1	intron_retention	FALSE	canonical	0	0	junction_6	115.117114771778	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9376	False	NA	13	True	AATAAA	-14	NA	87603966	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625186_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.33	chr1	+	3095	22	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	129.812860244304	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAACAGTCAGGT	9386	False	NA	-4	True	NA	NA	NA	87603976	87647410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609345_87611462_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.34	chr1	+	3122	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	23	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	128.462112947008	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	9393	False	NA	19	True	NA	NA	NA	87603983	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609485_87611474_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.35	chr1	+	4093	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	25	0	intron_retention	FALSE	canonical	0	0	junction_10	115.437666622656	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9395	False	NA	14	True	AATAAA	-15	NA	87603985	87648224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628888_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.36	chr1	+	3321	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	29	18	intron_retention	FALSE	canonical	3	20	junction_14	111.749131901441	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9399	False	NA	20	True	NA	NA	NA	87603989	87647434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.37	chr1	+	3933	23	ISM	ENSMUSG00000026288.15	ENSMUST00000072999.13	4677	28	55870	-3	29	-1	3prime_fragment	FALSE	canonical	1	2	junction_20	112.541865488374	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCTGACTGTGTGGTA	9399	False	NA	18	True	AATAAA	-19	NA	87603989	87648228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642982_87643036_87645411_87646007_87647042
ES.953.38	chr1	+	4041	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	36	-1	intron_retention	FALSE	canonical	3	35	junction_6	108.523485655297	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9406	False	NA	13	True	AATAAA	-14	NA	87603996	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.39	chr1	+	3315	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	36	16	intron_retention	FALSE	canonical	1	4	junction_15	114.72880376217	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGTGTTAAGTGCT	9406	False	NA	18	True	NA	NA	NA	87603996	87647432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637321_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.4	chr1	+	4118	27	NNC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	-3	17	intron_retention	FALSE	canonical	1	2	junction_3	207.178284856247	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	NA	False	NA	19	True	NA	NA	NA	87548074	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637321_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.41	chr1	+	5929	21	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	37	1	intron_retention	FALSE	canonical	0	0	junction_15	117.69456232129	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9407	False	NA	20	True	AATAAA	-21	NA	87603997	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637590_87637633_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.42	chr1	+	4347	23	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	37	-3	intron_retention	FALSE	canonical	0	0	junction_10	193.447240121806	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGGGCCTCCTGACTG	9407	False	NA	11	True	AATAAA	-12	NA	87603997	87648221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628285_87628469_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635585_87635779_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.44	chr1	+	4389	23	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	37	172	intron_retention	FALSE	non_canonical	0	0	junction_4	174.126272221299	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAACCGGCCGGGCTCTA	9407	False	NA	NA	False	ATTAAA	-21	NA	87603997	87647588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619344_87619454_87621891_87622678_87622905_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.46	chr1	+	3854	22	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	37	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_19	112.00904968298	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9407	False	NA	19	True	AATAAA	-20	NA	87603997	87648229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642998_87643036_87645411_87646007_87647042
ES.953.47	chr1	+	7247	21	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	37	1	intron_retention	FALSE	canonical	0	0	junction_15	151.276766226675	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9407	False	NA	20	True	AATAAA	-21	NA	87603997	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87635932_87637339_87637590_87637633_87638875_87639752_87639903_87640914_87641012_87642998_87643036_87645411_87646007_87647042
ES.953.49	chr1	+	6673	20	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	37	-2	intron_retention	FALSE	canonical	3	377	junction_4	52.8961246217528	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCCTCCTGACTGT	9407	False	NA	12	True	AATAAA	-13	NA	87603997	87648222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.5	chr1	+	3916	28	FSM	ENSMUSG00000026288.15	ENSMUST00000168783.8	3854	28	-42	-20	1	20	multi-exon	FALSE	canonical	1	2	junction_3	195.454315825361	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGTTAAGTGCTTTAT	NA	False	NA	22	True	NA	NA	NA	87548078	87647436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.52	chr1	+	5678	22	NNC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	44	-1	intron_retention	FALSE	non_canonical	0	0	junction_19	151.069880663014	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9414	False	NA	13	True	AATAAA	-14	NA	87604004	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635585_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642912_87642953_87643036_87645411_87646007_87647042
ES.953.53	chr1	+	4132	23	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	44	0	intron_retention	FALSE	canonical	0	0	junction_15	147.597313465214	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9414	False	NA	14	True	AATAAA	-15	NA	87604004	87648224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635585_87635637_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.54	chr1	+	3968	24	NNC	ENSMUSG00000026288.15	novel	3854	28	NA	NA	44	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	156.380225883131	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCCTCCTGACTGT	9414	False	NA	12	True	AATAAA	-13	NA	87604004	87648222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87634275_87634348_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.55	chr1	+	3269	22	NNC	ENSMUSG00000026288.15	novel	3854	28	NA	NA	46	0	intron_retention	FALSE	non_canonical	0	0	junction_1	151.095245599027	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGTCAGGTGCCATG	9416	False	NA	2	True	NA	NA	NA	87604006	87647416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604087_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619458_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.57	chr1	+	5484	21	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	51	-2	intron_retention	FALSE	canonical	0	0	junction_5	117.182283217217	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCCTCCTGACTGT	9421	False	NA	12	True	AATAAA	-13	NA	87604011	87648222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619458_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.58	chr1	+	4281	18	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	55	-1	intron_retention	FALSE	canonical	0	0	junction_10	193.759062741498	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9425	False	NA	13	True	AATAAA	-14	NA	87604015	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87633655_87633746_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.59	chr1	+	3937	23	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	56	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	145.243966887976	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9426	False	NA	13	True	AATAAA	-14	NA	87604016	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642979_87643036_87645411_87646007_87647009
ES.953.6	chr1	+	4876	27	FSM	ENSMUSG00000026288.15	ENSMUST00000169754.8	4937	27	66	-5	-11	5	multi-exon	FALSE	canonical	1	2	junction_3	193.725271374776	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGGTATCTTCC	NA	False	NA	24	True	AATAAA	-25	NA	87548099	87648234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87548354_87563013_87563078_87593108_87593260_87595610_87595786_87597363_87597505_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.62	chr1	+	4099	22	NNC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	57	0	intron_retention	FALSE	canonical	0	0	junction_1	115.44815565435	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9427	False	NA	19	True	AATAAA	-20	NA	87604017	87648229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609184_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.66	chr1	+	3221	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	65	16	intron_retention	FALSE	canonical	3	35	junction_6	108.523485655297	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGTGTTAAGTGCT	9435	False	NA	18	True	NA	NA	NA	87604025	87647432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.68	chr1	+	4337	22	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	72	-1	intron_retention	FALSE	canonical	3	35	junction_6	126.883327056029	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9442	False	NA	13	True	AATAAA	-14	NA	87604032	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.69	chr1	+	3078	21	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	73	170	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	130.960786115539	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTAACCGGCCGGGCTC	9443	False	NA	NA	False	ATTAAA	-19	NA	87604033	87647586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87604093_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.7	chr1	+	179	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATTAAAGAAGT	6681	False	NA	NA	False	NA	NA	NA	87601271	87601450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87601300_87601400
ES.953.74	chr1	+	4141	23	NNC	ENSMUSG00000026288.15	novel	4880	27	NA	NA	81	0	intron_retention	FALSE	canonical	0	0	junction_16	147.725069913646	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCTCCTGACTGTGTG	9451	False	NA	15	True	AATAAA	-16	NA	87604041	87648225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638075_87638172_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.75	chr1	+	3754	22	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	84	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	143.015261700859	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9454	False	NA	13	True	AATAAA	-14	NA	87604044	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642998_87643036_87645411_87646007_87647042
ES.953.76	chr1	+	3465	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	84	16	intron_retention	FALSE	canonical	3	20	junction_1	111.669357262742	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTGTGTTAAGTGCT	9454	False	NA	18	True	NA	NA	NA	87604044	87647432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.77	chr1	+	4229	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	118	1	intron_retention	FALSE	canonical	3	20	junction_1	111.669357262742	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	9488	False	NA	20	True	AATAAA	-21	NA	87604078	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.78	chr1	+	3382	22	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	181	15	intron_retention	FALSE	canonical	3	20	junction_1	145.788652047269	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCTGTGTTAAGTGC	9551	False	NA	17	True	NA	NA	NA	87604141	87647431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.79	chr1	+	3514	22	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	192	173	intron_retention	FALSE	canonical	3	20	junction_1	111.669357262742	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACCGGCCGGGCTCTAC	9562	False	NA	NA	False	ATTAAA	-22	NA	87604152	87647589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.8	chr1	+	4338	23	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-2197	-1	intron_retention	FALSE	canonical	0	0	junction_1	112.913052558225	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	7173	False	NA	13	True	AATAAA	-14	NA	87601763	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87602022_87604004_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.80	chr1	+	3144	23	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	200	-6	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	126.783809287782	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAATAACAGTCAGGT	9570	False	NA	-4	True	NA	NA	NA	87604160	87647410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.82	chr1	+	13003	18	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	214	-1	intron_retention	FALSE	canonical	0	0	junction_14	182.071433565003	724	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9584	False	NA	13	True	AATAAA	-14	NA	87604174	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87637590_87637633_87638875_87639752_87639903_87640914_87646007_87647042
ES.953.83	chr1	+	3939	23	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	218	-1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	126.783809287782	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	9588	False	NA	13	True	AATAAA	-14	NA	87604178	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.84	chr1	+	3156	23	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	226	17	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	154.585128597388	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTGTGTTAAGTGCTT	9596	False	NA	19	True	NA	NA	NA	87604186	87647433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.86	chr1	+	3471	21	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	5301	5	intron_retention	FALSE	canonical	3	151	junction_18	89.5020111505881	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGGTGCCATGTGCTG	1446	False	NA	7	True	NA	NA	NA	87609261	87647421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.87	chr1	+	5667	19	NIC	ENSMUSG00000026288.15	novel	4937	27	NA	NA	5446	0	intron_retention	FALSE	canonical	3	377	junction_2	53.2525139961822	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	1591	False	NA	19	True	AATAAA	-20	NA	87609406	87648229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87643036_87645411_87646007_87647042
ES.953.88	chr1	+	3734	18	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	7502	1	intron_retention	FALSE	canonical	2	13	junction_11	122.125750609516	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACTGTGTGGTATC	3647	False	NA	20	True	AATAAA	-21	NA	87611462	87648230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.89	chr1	+	3579	17	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-13956	-1	intron_retention	FALSE	canonical	0	0	junction_16	122.516580510558	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	2647	False	NA	13	True	AATAAA	-14	NA	87623106	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647019
ES.953.9	chr1	+	3460	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	-125	790	-125	18	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTGTTAAGTGCTTT	9245	False	NA	20	True	NA	NA	NA	87603835	87647434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.90	chr1	+	3196	16	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-13920	15	intron_retention	FALSE	canonical	3	35	junction_1	121.211550604718	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCTGTGTTAAGTGC	2683	False	NA	17	True	NA	NA	NA	87623142	87647431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87623158_87625117_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.91	chr1	+	6700	14	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-11944	-1	intron_retention	FALSE	canonical	0	0	junction_8	138.457093945761	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	4659	False	NA	13	True	AATAAA	-14	NA	87625118	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87625268_87625834_87625953_87626749_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87637590_87637633_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.92	chr1	+	3287	17	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-11873	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	179.042767237328	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCTGACTGTGTGGTA	4730	False	NA	18	True	AATAAA	-19	NA	87625189	87648228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635585_87635779_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.93	chr1	+	3838	14	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-11194	7	intron_retention	FALSE	canonical	3	419	junction_2	48.0979031146231	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGTGCCATGTGCTGTG	347	False	NA	9	True	NA	NA	NA	87625868	87647423	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.94	chr1	+	3045	16	NNC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	-10301	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	184.463112843734	721	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCCTCCTGACTGT	76	False	NA	12	True	AATAAA	-13	NA	87626761	87648222	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635585_87635637_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.95	chr1	+	2140	13	ISM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	24920	633	-8182	175	3prime_fragment	FALSE	canonical	3	151	junction_10	104.767069677876	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGGCCGGGCTCTACTG	2195	False	NA	NA	False	ATTAAA	-24	NA	87628880	87647591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ES.953.96	chr1	+	2955	12	ISM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	24920	1	-8182	-1	3prime_fragment	FALSE	canonical	3	422	junction_1	42.7688385827697	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	2195	False	NA	13	True	AATAAA	-14	NA	87628880	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.97	chr1	+	5676	8	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-4337	-1	intron_retention	FALSE	canonical	3	442	junction_1	40.9519379821004	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	6040	False	NA	13	True	AATAAA	-14	NA	87632725	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.98	chr1	+	2675	9	ISM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	29694	1	-3408	-1	3prime_fragment	FALSE	canonical	3	442	junction_2	40.4503940030255	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	6969	False	NA	13	True	AATAAA	-14	NA	87633654	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.953.99	chr1	+	7297	6	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	-3186	-1	intron_retention	FALSE	canonical	3	491	junction_2	31.4095526870409	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGCCTCCTGACTGTG	7191	False	NA	13	True	AATAAA	-14	NA	87633876	87648223	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ES.9530.1	chr13	-	4608	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	691	-6	-1	6	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTAGTTTTTGTCTA	NA	False	NA	NA	False	NA	NA	NA	67701258	67686753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ES.9530.2	chr13	-	4688	5	NNC	ENSMUSG00000095432.10	novel	5293	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.0523751104485	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGAACTGTAGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	67701257	67686757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67691030_67693442_67693539_67694743_67694871_67699837_67699923_67701149
ES.9530.3	chr13	-	4294	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	706	293	14	-293	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATGTTGTCAGACTGT	NA	False	NA	NA	False	NA	NA	NA	67701243	67687052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ES.9530.4	chr13	-	4085	5	NNC	ENSMUSG00000095432.10	novel	5293	4	NA	NA	4	-597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.0523751104485	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701253	67687356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67691030_67693442_67693539_67694743_67694871_67699837_67699923_67701149
ES.9530.5	chr13	-	4033	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	663	597	-29	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701286	67687356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ES.9530.6	chr13	-	5169	3	NIC	ENSMUSG00000095432.10	novel	5293	4	NA	NA	38	-599	intron_retention	FALSE	canonical	3	55	junction_1	2.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTAGTCATGGCATT	NA	False	NA	-2	True	NA	NA	NA	67701219	67687358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67691030_67693442_67694871_67701149
ES.9530.7	chr13	-	3587	1	NIC	ENSMUSG00000095432.10	novel	5293	4	NA	NA	3969	-628	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67697288	67693701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67693700_67697300
ES.9531.1	chr13	+	810	2	FSM	ENSMUSG00000097360.9	ENSMUST00000223845.2	1380	2	231	339	3	-339	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67701384	67702414	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67701473_67701692
ES.9532.1	chr13	+	5767	2	Antisense	novelGene_ENSMUSG00000114923.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATCTGTAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	67743978	67751844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_67748011_67750109
ES.9533.1	chr13	-	4937	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	8	-4090	8	100	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGATATTTTATCA	NA	False	NA	96	True	NA	NA	NA	67757798	67737457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
ES.9533.10	chr13	-	3790	5	NNC	ENSMUSG00000058093.14	novel	4835	4	NA	NA	10	-7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.667792767088	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATGTCAAAAATACAAATG	NA	False	NA	NA	False	AATAAA	-23	NA	67757796	67738237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67741477_67741811_67742035_67743334_67743431_67744767_67744895_67757691
ES.9533.11	chr13	-	6114	1	ISM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	18915	0	-23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGATGGTCTCTCGTGAT	NA	False	NA	-2	True	NA	NA	NA	67766995	67760881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67760900_67767000
ES.9533.12	chr13	-	5665	1	ISM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	17627	1737	-1311	-1737	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTGGTGGTGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	67768283	67762618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67762600_67768300
ES.9533.13	chr13	-	5915	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	-9	3549	-9	-3	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCTGTTGAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	67785919	67764430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ES.9533.14	chr13	-	4229	5	NIC	ENSMUSG00000021510.12	novel	9455	4	NA	NA	6	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	13.2382022948737	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCTGTTGAAACAATAA	NA	False	NA	NA	False	NA	NA	NA	67785904	67764430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_67764668_67766338_67769969_67771586_67771683_67772153_67772281_67785765
ES.9533.15	chr13	-	5518	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	24	3913	24	351	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTTTGTATTTTATG	NA	False	NA	NA	False	AATAAA	-17	NA	67785886	67764794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ES.9533.16	chr13	-	5230	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	-8	4233	-8	31	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTATTTTATTTATGAG	NA	False	NA	3	True	NA	NA	NA	67785918	67765114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ES.9533.17	chr13	-	5152	4	NNC	ENSMUSG00000021510.12	novel	9455	4	NA	NA	22	26	intron_retention	FALSE	canonical	0	0	junction_3	14.8398861930347	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTAGCCTATTTTATTT	NA	False	NA	-2	True	NA	NA	NA	67785888	67765119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67769969_67771586_67771683_67772153_67772238_67785765
ES.9533.18	chr13	-	4994	4	NNC	ENSMUSG00000021510.12	novel	9455	4	NA	NA	9	-214	intron_retention	FALSE	canonical	0	0	junction_3	14.8398861930347	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGGCATTGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	67785901	67765359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67769969_67771586_67771683_67772153_67772281_67785739
ES.9533.19	chr13	-	4283	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	-8	5180	-8	-916	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGCCTATTTTATTTA	NA	False	NA	2	True	NA	NA	NA	67785918	67766061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ES.9533.2	chr13	-	4653	5	NNC	ENSMUSG00000058093.14	novel	4835	4	NA	NA	4	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24.667792767088	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTCTTCATAAGACTAG	NA	False	NA	6	True	NA	NA	NA	67757802	67737547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67739627_67739794_67742035_67743334_67743431_67744767_67744895_67757691
ES.9533.20	chr13	-	4635	5	Fusion	ENSMUSG00000048280.19_ENSMUSG00000021510.12	novel	683	5	NA	NA	417	-916	multi-exon	TRUE	non_canonical	0	0	junction_1	7.0178344238091	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGCCTATTTTATTTA	NA	False	NA	2	True	NA	NA	NA	67834773	67766061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67766069_67815562_67819731_67821116_67821213_67821680_67821808_67834536
ES.9533.22	chr13	-	4481	5	Fusion	ENSMUSG00000048280.19_ENSMUSG00000021510.12	novel	652	4	NA	NA	-2	-919	multi-exon	TRUE	non_canonical	0	0	junction_1	8.5841423566947	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTCTAGCCTATTTTAT	NA	False	NA	-1	True	NA	NA	NA	67831637	67766064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67766075_67815568_67819731_67821116_67821213_67821680_67821808_67831551
ES.9533.24	chr13	-	6302	4	NNC	ENSMUSG00000021510.12	novel	9455	4	NA	NA	708	-920	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.8398861930347	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCTAGCCTATTTTA	NA	False	NA	-2	True	NA	NA	NA	67785202	67766065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67769969_67771586_67771683_67772153_67772281_67783026
ES.9533.25	chr13	-	184	1	Intergenic	novelGene_7992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACAAAACACAAA	NA	False	NA	NA	False	NA	NA	NA	67804453	67804269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67804300_67804500
ES.9533.26	chr13	-	10540	3	NNC	ENSMUSG00000048280.19	novel	2331	3	NA	NA	-8744	5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAAGACTCTCCA	NA	False	NA	NA	False	TTTAAA	-3	NA	67818608	67806798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67812301_67813240_67814255_67814584
ES.9533.27	chr13	-	4602	4	FSM	ENSMUSG00000048280.19	ENSMUST00000175821.8	652	4	-40	-3910	-5	3910	multi-exon	FALSE	canonical	3	10	junction_1	5.09901951359278	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGATGACTTTGGGAA	NA	False	NA	82	True	NA	NA	NA	67831675	67815475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67819731_67821116_67821213_67821680_67821808_67831551
ES.9533.28	chr13	-	4712	4	ISM	ENSMUSG00000048280.19	ENSMUST00000110973.3	683	5	415	-4090	415	3905	3prime_fragment	FALSE	canonical	2	5	junction_3	5.79271573232759	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTAGCATGATGACTTT	NA	False	NA	77	True	NA	NA	NA	67834775	67815480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67819731_67821116_67821213_67821680_67821808_67834536
ES.9533.29	chr13	-	4569	4	NNC	ENSMUSG00000048280.19	novel	13215	4	NA	NA	5	3831	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	5.79271573232759	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTTTATTTATGAGA	NA	False	NA	3	True	NA	NA	NA	67831665	67815554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67819731_67821116_67821213_67821680_67821808_67831495
ES.9533.3	chr13	-	4820	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	15	0	-5	0	multi-exon	FALSE	canonical	3	23	junction_3	17.2497987105808	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757811	67737557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
ES.9533.30	chr13	-	3302	5	NNC	ENSMUSG00000048280.19	novel	683	5	NA	NA	11	3831	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7.0178344238091	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTTTATTTATGAGA	NA	False	NA	3	True	NA	NA	NA	67831659	67815554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67818352_67819612_67819731_67821116_67821213_67821680_67821808_67831495
ES.9533.32	chr13	-	4499	4	NNC	ENSMUSG00000048280.19	novel	13215	4	NA	NA	1116	3827	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.76029781788188	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67834074	67815558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67819731_67821116_67821213_67821680_67821808_67833970
ES.9533.33	chr13	-	4337	5	NNC	ENSMUSG00000048280.19	novel	652	4	NA	NA	6	3824	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	8.5841423566947	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTGTTATTTTATT	NA	False	NA	-4	True	NA	NA	NA	67831664	67815561	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67816935_67817102_67819731_67821116_67821213_67821680_67821808_67831551
ES.9533.34	chr13	-	3973	5	NNC	ENSMUSG00000048280.19	novel	683	5	NA	NA	-6	3427	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	7.0178344238091	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGTAGTTCAAATGGG	NA	False	NA	NA	False	ATTAAA	-19	NA	67831641	67815958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67816935_67817102_67819731_67821116_67821213_67821680_67821808_67831495
ES.9533.35	chr13	-	4088	4	FSM	ENSMUSG00000048280.19	ENSMUST00000175821.8	652	4	-9	-3427	-9	3427	multi-exon	FALSE	canonical	3	10	junction_1	5.09901951359278	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGTAGTTCAAATGGG	NA	False	NA	NA	False	ATTAAA	-19	NA	67831644	67815958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67819731_67821116_67821213_67821680_67821808_67831551
ES.9533.36	chr13	-	3408	4	NNC	ENSMUSG00000048280.19	novel	13215	4	NA	NA	-6	2694	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	5.79271573232759	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATAGTATGTTGCCTGGT	NA	False	NA	NA	False	NA	NA	NA	67831641	67816691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67819731_67821116_67821213_67821680_67821808_67831495
ES.9533.37	chr13	-	576	3	ISM	ENSMUSG00000048280.19	ENSMUST00000110973.3	683	5	405	1442	405	-170	internal_fragment	FALSE	canonical	2	5	junction_2	7	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTCTGTCTTTTTCTTT	NA	False	NA	NA	False	TATAAA	-18	NA	67834785	67821012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67821213_67821680_67821808_67834536
ES.9533.38	chr13	-	138	1	Intergenic	novelGene_7993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTAGCTGCAT	NA	False	NA	NA	False	NA	NA	NA	67834903	67834765	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67834800_67834900
ES.9533.4	chr13	-	4258	2	Fusion	ENSMUSG00000021510.12_ENSMUSG00000058093.14	novel	4835	4	NA	NA	-577	0	multi-exon	TRUE	canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67767549	67737557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_67741781_67767514
ES.9533.5	chr13	-	4770	4	NNC	ENSMUSG00000058093.14	novel	4835	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	19.6015872373189	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757802	67737557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67742035_67743334_67743431_67744808_67744895_67757691
ES.9533.6	chr13	-	4921	4	NNC	ENSMUSG00000058093.14	novel	855	4	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.4057897071863	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGTTTGGTGTCTCTT	NA	False	NA	-5	True	NA	NA	NA	67757803	67737558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67742035_67743254_67743431_67744767_67744895_67757661
ES.9533.7	chr13	-	4856	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	-12	-3989	8	-1	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGTTTGGTGTCTCTT	NA	False	NA	-5	True	NA	NA	NA	67757818	67737558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
ES.9533.8	chr13	-	4179	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	4	-3328	4	11	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTGTTTATTCTCT	NA	False	NA	NA	False	AATAAA	-41	NA	67757802	67738219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
ES.9533.9	chr13	-	4134	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	28	673	8	0	multi-exon	FALSE	canonical	3	23	junction_3	17.2497987105808	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAATGTCAGACT	NA	False	NA	NA	False	AATAAA	-30	NA	67757798	67738230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
ES.9534.1	chr13	-	3993	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	-7	-2883	-7	3	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATTTTATTTATGAG	NA	False	NA	2	True	NA	NA	NA	67872452	67853424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ES.9534.2	chr13	-	3912	4	FSM	ENSMUSG00000071281.13	ENSMUST00000073157.15	3957	4	44	1	44	-1	multi-exon	FALSE	canonical	2	4	junction_3	15.2970585407784	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGTTATTTTATTTA	NA	False	NA	-2	True	NA	NA	NA	67877248	67853428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67877179
ES.9534.3	chr13	-	3905	4	NNC	ENSMUSG00000071281.13	novel	3957	4	NA	NA	105	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.1334630345285	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTGTTATTTTATT	NA	False	NA	-4	True	NA	NA	NA	67877187	67853430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67857049_67858433_67858530_67858999_67859127_67877123
ES.9534.4	chr13	-	3056	1	ISM	ENSMUSG00000071281.13	ENSMUST00000073157.15	3957	4	20520	289	15619	-289	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATGGGGCAAGTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	67856772	67853716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67853700_67856800
ES.9534.5	chr13	-	3576	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	16	-2489	16	-391	multi-exon	FALSE	canonical	3	31	junction_1	3.85861230093008	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAACTGGAGTGAAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	67872429	67853818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ES.9534.6	chr13	-	3262	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	5	-2164	5	-716	multi-exon	FALSE	canonical	3	31	junction_1	3.85861230093008	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTTTGCAGAGAAAAC	NA	False	NA	NA	False	AAGAAA	-6	NA	67872440	67854143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ES.9535.1	chr13	+	1416	1	Genic_Genomic	ENSMUSG00000044081.8	novel	NA	NA	NA	NA	-1219	-9404	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAACCACT	NA	False	NA	NA	False	NA	NA	NA	67891103	67892519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_67891100_67892500
ES.9536.1	chr13	-	2194	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	117	1	35	-1	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAGTATTGTGATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	67903230	67895919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
ES.9536.2	chr13	-	2190	4	NNC	ENSMUSG00000058331.16	novel	2312	4	NA	NA	-9	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.33999733546454	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTGTCAGTATTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	67903274	67895924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67897842_67899728_67899825_67900506_67900591_67903181
ES.9537.1	chr13	-	193	1	ISM	ENSMUSG00000052909.9	ENSMUST00000171257.4	2904	3	10420	125	10420	-125	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACATCAAATAAT	NA	False	NA	NA	False	NA	NA	NA	67911150	67910957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67911000_67911200
ES.9538.1	chr13	-	146	1	ISM	ENSMUSG00000052909.9	ENSMUST00000171257.4	2904	3	8964	1628	8964	-1628	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGACACCAATTC	NA	False	NA	NA	False	NA	NA	NA	67912606	67912460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_67912500_67912600
ES.9539.1	chr13	-	900	3	NNC	ENSMUSG00000052909.9	novel	2904	3	NA	NA	-2203	-9537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCGGCTGTATGCGAA	NA	False	NA	NA	False	TATAAA	-22	NA	67923773	67920369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_67920946_67921349_67921572_67923671
ES.954.1	chr1	-	2747	21	Antisense	novelGene_ENSMUSG00000026288.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGAGCAGAGGTTCAAGG	4807	False	NA	NA	False	NA	NA	NA	87645855	87604004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87604091_87609211_87609290_87609406_87609479_87611462_87611588_87619347_87619449_87623049_87623157_87625069_87625266_87625831_87625952_87626748_87626845_87627359_87627500_87628880_87628990_87629135_87629225_87630838_87630921_87633654_87633746_87635816_87635931_87637337_87637421_87638784_87638870_87639748_87639898_87640907_87641010_87642757_87643034_87645409
ES.954.2	chr1	-	175	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAGAAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	87610505	87610330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87610300_87610500
ES.9540.1	chr13	+	3079	4	Fusion	ENSMUSG00000090659.10_ENSMUSG00000097906.2	novel	3258	4	NA	NA	-3	1730	multi-exon	FALSE	canonical	0	0	junction_3	16.0485374896143	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGTTTCTATTTGT	NA	False	NA	NA	False	NA	NA	NA	67927808	67961049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932587_67958301
ES.9540.10	chr13	+	3107	5	Fusion	ENSMUSG00000090659.10_ENSMUSG00000097906.2	novel	3258	4	NA	NA	16	1727	multi-exon	FALSE	canonical	1	1	junction_3	15.1657508881031	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTTGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	67927888	67961046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932609_67949963_67950053_67958301
ES.9540.11	chr13	+	3124	4	NNC	ENSMUSG00000090659.10	novel	3258	4	NA	NA	46	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3527000944073	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67927918	67937201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927939_67931951_67932036_67932512_67932609_67934277
ES.9540.12	chr13	+	4161	3	Genic_Genomic	ENSMUSG00000090659.10	novel	730	4	NA	NA	3903	2185	multi-exon	FALSE	non_canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGTCTGACTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	67937978	67942816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_67939276_67939867_67940346_67940430
ES.9540.13	chr13	+	4513	5	Fusion	ENSMUSG00000030446.18_ENSMUSG00000097906.2	novel	2399	4	NA	NA	-12318	664	multi-exon	FALSE	canonical	0	0	junction_2	10.8021988502342	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTGTATTTTACATCA	NA	False	NA	NA	False	AATAAA	-15	NA	67946046	67975785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_67946100_67958301_67959856_67970359_67970487_67971218_67971315_67973102
ES.9540.14	chr13	+	2986	4	NNC	ENSMUSG00000030446.18	novel	2399	4	NA	NA	-11	665	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4.49691252107735	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTGTATTTTACATCAA	NA	False	NA	NA	False	AATAAA	-16	NA	67961919	67975786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67962016_67970359_67970487_67971235_67971315_67973102
ES.9540.15	chr13	+	2991	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	71	-663	-1	663	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTTGTATTTTACATC	NA	False	NA	NA	False	AATAAA	-14	NA	67961929	67975784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
ES.9540.16	chr13	+	1280	1	Genic_Genomic	ENSMUSG00000030446.18	novel	NA	NA	NA	NA	11913	6	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGTATTGCATTCTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	67973847	67975127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_67973800_67975100
ES.9540.2	chr13	+	3352	5	NNC	ENSMUSG00000090659.10	novel	3258	4	NA	NA	-3	4	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	14.6543508897528	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67927808	67937201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927939_67929518_67929594_67931908_67932036_67932512_67932609_67934277
ES.9540.3	chr13	+	3092	4	Fusion	ENSMUSG00000090659.10_ENSMUSG00000097906.2	novel	3258	4	NA	NA	0	1724	multi-exon	FALSE	canonical	2	7	junction_3	12.7540843131393	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTATGTGTTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	67927811	67961043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_67927939_67931908_67932036_67932512_67932609_67958301
ES.9540.4	chr13	+	3237	4	NNC	ENSMUSG00000090659.10	novel	3258	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.0485374896143	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGATTTTGGTCAGTGT	NA	False	NA	6	True	NA	NA	NA	67927823	67937198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927939_67931908_67932036_67932512_67932587_67934277
ES.9540.5	chr13	+	668	5	NNC	ENSMUSG00000090659.10	novel	730	4	NA	NA	-1	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	17.0146995271736	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTTGGCTTCCAT	NA	False	NA	NA	False	NA	NA	NA	67927833	67940637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927939_67931908_67932036_67932512_67932587_67940190_67940346_67940430
ES.9540.6	chr13	+	3252	4	FSM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	10	-4	-1	4	multi-exon	FALSE	canonical	3	27	junction_3	3.39934634239519	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67927833	67937201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_67927939_67931908_67932036_67932512_67932609_67934277
ES.9540.7	chr13	+	4921	3	ISM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	10	-4	-1	4	intron_retention	FALSE	canonical	3	33	junction_2	1	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67927833	67937201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_67927939_67931908_67932036_67932512
ES.9540.8	chr13	+	7661	5	NNC	ENSMUSG00000090659.10	novel	3258	4	NA	NA	-18	6	intron_retention	FALSE	non_canonical	0	0	junction_3	17.0146995271736	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGTCTTGGCTTCCAT	NA	False	NA	NA	False	NA	NA	NA	67927854	67940637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927939_67931908_67932036_67932512_67939281_67939870_67940346_67940430
ES.9540.9	chr13	+	3317	5	NNC	ENSMUSG00000090659.10	novel	461	4	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.9059551857638	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTGGTCAGTGTTTT	NA	False	NA	9	True	NA	NA	NA	67927881	67937201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67927977_67929518_67929594_67931908_67932036_67932512_67932609_67934277
ES.9541.1	chr13	-	168	1	Intergenic	novelGene_7994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGTCCGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	67946745	67946577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_67946600_67946700
ES.9542.1	chr13	-	4134	1	Antisense	novelGene_ENSMUSG00000030446.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	CATAAA	-7	NA	67975046	67970912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_67970900_67975000
ES.9543.1	chr13	+	2220	3	NNC	ENSMUSG00000058246.9	novel	549	4	NA	NA	-67	843	intron_retention	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTTGTCTTGACCTGT	NA	False	NA	NA	False	NA	NA	NA	67979157	67992997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_67979399_67981913_67982010_67991114
ES.9544.1	chr13	+	160	1	Intergenic	novelGene_7995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	67993709	67993869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_67993700_67993900
ES.9545.1	chr13	+	161	1	Intergenic	novelGene_7996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	68030851	68031012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_68030900_68031000
ES.9546.1	chr13	+	2528	3	FSM	ENSMUSG00000113273.2	ENSMUST00000222807.2	2884	3	0	356	0	-356	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACTTGCCTTGGTCTCGG	NA	False	NA	NA	False	NA	NA	NA	68129333	68133734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_68129438_68130667_68130736_68131378
ES.9547.1	chr13	+	193	1	Intergenic	novelGene_7997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGATCCCTTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	68138589	68138782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_68138600_68138800
ES.9548.1	chr13	+	179	1	Intergenic	novelGene_7998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAAGAGTTGCC	NA	False	NA	NA	False	NA	NA	NA	68340069	68340248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_68340100_68340200
ES.9549.1	chr13	+	3992	1	Intergenic	novelGene_7999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTTAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	68445168	68449160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_68445200_68449200
ES.955.1	chr1	+	3284	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	-154	0	-11	0	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7091	False	NA	23	True	AATAAA	-32	NA	87683580	87720150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.10	chr1	+	3818	15	NIC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	21	0	intron_retention	FALSE	canonical	3	160	junction_8	20.0841342601465	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7266	False	NA	17	True	AATAAA	-26	NA	87683755	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.11	chr1	+	3065	18	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	-11	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.0344306174285	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTTTTCAAACTCCTT	7277	False	NA	6	True	AATAAA	-15	NA	87683766	87720133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87686044_87686086_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.12	chr1	+	6903	15	NNC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	0	-7	intron_retention	TRUE	canonical	2	6	junction_8	68.2751037781589	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAAACTCCTTGCGT	7288	False	NA	10	True	AATAAA	-19	NA	87683777	87720137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717203_87717293_87717342_87718307
ES.955.13	chr1	+	4365	15	NIC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_8	19.3913772126706	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7288	False	NA	17	True	AATAAA	-26	NA	87683777	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.15	chr1	+	2994	17	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	65.1697003503162	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7288	False	NA	17	True	AATAAA	-26	NA	87683777	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703504_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713715_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.16	chr1	+	4361	13	ISM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-20	3232	0	628	5prime_fragment	FALSE	canonical	3	160	junction_8	21.9563961827376	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGCTAGGGACATAGT	7288	False	NA	NA	False	AATAAA	-18	NA	87683777	87716912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962
ES.955.17	chr1	+	7776	14	NIC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	1	0	intron_retention	FALSE	canonical	3	160	junction_7	19.85390427077	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7289	False	NA	17	True	AATAAA	-26	NA	87683778	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.18	chr1	+	6184	16	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_7	50.3540354776942	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7289	False	NA	17	True	AATAAA	-26	NA	87683778	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87701954_87703478_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.19	chr1	+	6873	13	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	1	0	intron_retention	FALSE	canonical	3	160	junction_8	21.681245095448	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7289	False	NA	20	True	AATAAA	-29	NA	87683778	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717342_87718307
ES.955.2	chr1	+	3458	17	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	53	0	intron_retention	FALSE	canonical	3	20	junction_7	60.2348269276172	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7155	False	NA	17	True	AATAAA	-26	NA	87683644	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.20	chr1	+	3400	17	NNC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_8	64.7815741067628	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7289	False	NA	20	True	AATAAA	-29	NA	87683778	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.21	chr1	+	7492	14	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	1	-5	intron_retention	FALSE	canonical	3	10	junction_12	52.6594507327914	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAAACTCCTTGCGTCT	7289	False	NA	12	True	AATAAA	-21	NA	87683778	87720139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713715_87713962_87717203_87717293
ES.955.22	chr1	+	3928	16	NNC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	1	0	intron_retention	FALSE	canonical	2	6	junction_8	66.1820385166717	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7289	False	NA	20	True	AATAAA	-29	NA	87683778	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.23	chr1	+	4957	16	NNC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	2	-11	intron_retention	FALSE	canonical	2	6	junction_8	63.9738140873974	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTTTTCAAACTCCTT	7290	False	NA	6	True	AATAAA	-15	NA	87683779	87720133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.24	chr1	+	3149	18	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	2	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	62.8742359808293	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAACTCCTTGCGTCTTG	7290	False	NA	14	True	AATAAA	-23	NA	87683779	87720141	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.25	chr1	+	4519	15	ISM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-15	-6	5	0	intron_retention	FALSE	canonical	3	160	junction_8	20.3319392853225	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7293	False	NA	23	True	AATAAA	-32	NA	87683782	87720150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293
ES.955.26	chr1	+	3126	19	FSM	ENSMUSG00000026289.16	ENSMUST00000113190.3	3102	19	-24	0	6	0	multi-exon	FALSE	canonical	0	0	junction_8	71.7840554530318	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7294	False	NA	20	True	AATAAA	-29	NA	87683783	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87702802_87702851_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.28	chr1	+	3193	19	NNC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	83.9619990468939	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7302	False	NA	17	True	AATAAA	-26	NA	87683791	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713715_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.29	chr1	+	3720	16	NNC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	-5	-7	intron_retention	FALSE	canonical	2	6	junction_8	50.3589780145176	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAAACTCCTTGCGT	7303	False	NA	10	True	AATAAA	-19	NA	87683792	87720137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.3	chr1	+	2897	17	NIC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	50.0312402404737	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7186	False	NA	17	True	AATAAA	-26	NA	87683675	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87683808_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.31	chr1	+	5698	16	NIC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	-4	0	intron_retention	FALSE	canonical	3	160	junction_7	19.7951733735496	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7304	False	NA	20	True	AATAAA	-29	NA	87683793	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.32	chr1	+	3531	18	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	70.4669055307987	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCAAACTCCTTGCG	7304	False	NA	9	True	AATAAA	-18	NA	87683793	87720136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.33	chr1	+	6653	15	NNC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_12	53.2565987096665	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7304	False	NA	20	True	AATAAA	-29	NA	87683793	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713849_87713962_87717203_87717293_87717342_87718307
ES.955.34	chr1	+	1262	5	FSM	ENSMUSG00000026289.16	ENSMUST00000134603.2	1674	5	-20	432	-3	-432	multi-exon	FALSE	canonical	3	195	junction_1	13.2759180473518	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTCTTGAAAAGAACAC	7305	False	NA	NA	False	AATAAA	-15	NA	87683794	87695273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527
ES.955.35	chr1	+	6367	16	NNC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_8	66.737295919648	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7306	False	NA	20	True	AATAAA	-29	NA	87683795	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.36	chr1	+	5061	15	NIC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	-1	0	intron_retention	FALSE	canonical	3	160	junction_7	19.1700233677053	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7307	False	NA	20	True	AATAAA	-29	NA	87683796	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.4	chr1	+	2950	18	NIC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	70.7007436715438	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7193	False	NA	20	True	AATAAA	-29	NA	87683682	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87683808_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.40	chr1	+	7727	13	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	2	0	intron_retention	FALSE	canonical	3	160	junction_8	21.6814052435107	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7310	False	NA	20	True	AATAAA	-29	NA	87683799	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717203_87717293
ES.955.41	chr1	+	6746	14	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	3	-11	intron_retention	FALSE	canonical	3	160	junction_8	20.8312464438009	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTTTTCAAACTCCTT	7311	False	NA	6	True	AATAAA	-15	NA	87683800	87720133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87717203_87717293_87717342_87718307
ES.955.42	chr1	+	869	2	ISM	ENSMUSG00000026289.16	ENSMUST00000134603.2	1674	5	-14	7300	3	-7300	5prime_fragment	FALSE	canonical	3	195	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCAAAAGAAAAAAAGA	7311	False	NA	NA	False	NA	NA	NA	87683800	87688405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87684037_87687772
ES.955.43	chr1	+	3662	17	NNC	ENSMUSG00000026289.16	novel	3102	19	NA	NA	3	0	intron_retention	FALSE	canonical	2	6	junction_8	64.1286548666039	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7311	False	NA	20	True	AATAAA	-29	NA	87683800	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.44	chr1	+	4746	15	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	3	-7	intron_retention	FALSE	canonical	3	160	junction_7	19.1893093110913	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAAACTCCTTGCGT	7328	False	NA	10	True	AATAAA	-19	NA	87683817	87720137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.45	chr1	+	7871	13	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	59	0	intron_retention	FALSE	canonical	2	6	junction_8	72.9681722853647	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7384	False	NA	17	True	AATAAA	-26	NA	87683873	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597
ES.955.46	chr1	+	5165	16	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	1560	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	49.6062720048808	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	8885	False	NA	23	True	AATAAA	-32	NA	87685374	87720150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713715_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.47	chr1	+	3614	16	ISM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	3125	1	3108	-1	3prime_fragment	FALSE	canonical	3	160	junction_7	20.1057205789795	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTCCTTGCGTCTTGAT	NA	False	NA	16	True	AATAAA	-25	NA	87686922	87720143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.48	chr1	+	3666	3	ISM	ENSMUSG00000026289.16	ENSMUST00000134603.2	1674	5	8310	-1373	-2498	-44	3prime_fragment	FALSE	canonical	3	214	junction_2	4	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAAATAA	NA	False	NA	NA	False	NA	NA	NA	87692124	87697078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87693166_87693830_87693905_87694527
ES.955.49	chr1	+	3762	13	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	-2821	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	82.481774081039	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGCGTCTTGATTG	64	False	NA	18	True	AATAAA	-27	NA	87700465	87720145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87701954_87702534_87702592_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.5	chr1	+	3111	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-104	-3	-41	0	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7204	False	NA	20	True	AATAAA	-29	NA	87683693	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.50	chr1	+	3961	9	ISM	ENSMUSG00000026289.16	ENSMUST00000113190.3	3102	19	20854	7	1375	-4	3prime_fragment	FALSE	canonical	3	168	junction_1	10.7470926301023	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAAACTCCTTGCGTCTT	2313	False	NA	13	True	AATAAA	-22	NA	87704661	87720140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.51	chr1	+	1720	6	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	7417	-11	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.3101608126372	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACTTTTCAAACTCCTT	NA	False	NA	6	True	AATAAA	-15	NA	87713596	87720133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87713715_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.6	chr1	+	4745	1	NIC	ENSMUSG00000026289.16	novel	749	6	NA	NA	-39	-7265	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGAGCCATGTCTGGTG	7206	False	NA	NA	False	NA	NA	NA	87683695	87688440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87683700_87688400
ES.955.7	chr1	+	3620	16	ISM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	-85	-3	-22	0	intron_retention	FALSE	canonical	3	160	junction_8	19.646430266647	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7223	False	NA	20	True	AATAAA	-29	NA	87683712	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307
ES.955.8	chr1	+	3305	16	NIC	ENSMUSG00000026289.16	novel	3344	18	NA	NA	9	0	intron_retention	FALSE	canonical	3	160	junction_8	19.8422668955832	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGCGTCTTGATTGTC	7254	False	NA	20	True	AATAAA	-29	NA	87683743	87720147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.955.9	chr1	+	4611	18	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.494306500142	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7266	False	NA	17	True	AATAAA	-26	NA	87683755	87720144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87684037_87686044_87687610_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ES.9550.1	chr13	-	7271	2	Antisense	novelGene_ENSMUSG00000113342.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	68597563	68018795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_68019160_68590656
ES.9550.2	chr13	-	181	1	Intergenic	novelGene_8000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATAAGAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	68582717	68582536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_68582500_68582700
ES.9550.3	chr13	-	5998	1	Intergenic	novelGene_8001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	68596196	68590198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_68590200_68596200
ES.9551.1	chr13	-	3810	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-2	-116	-2	116	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGACATTTGTAAGTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	68730242	68708782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.10	chr13	-	3650	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.650085075805	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAAGCTTGGTGAGGCT	NA	False	NA	NA	False	ATTAAA	-20	NA	68730217	68708903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68730183
ES.9551.11	chr13	-	4118	14	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	124.256034582541	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAAGCTTGGTGAGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	68730244	68708904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720114_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
ES.9551.12	chr13	-	3289	14	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	32	-6	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_13	123.100093972729	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAAGCTTGGTGAGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	68730181	68708904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730148
ES.9551.13	chr13	-	3296	14	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	124.675484083123	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAAGCTTGGTGAGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	68730235	68708904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728823_68730183
ES.9551.14	chr13	-	4806	13	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	4	-7	intron_retention	FALSE	canonical	1	1	junction_5	131.0477012389	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATCAAGCTTGGTGAGG	NA	False	NA	NA	False	ATTAAA	-18	NA	68730209	68708905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68714374_68715060_68715571_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
ES.9551.16	chr13	-	3836	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-6	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.472352956189	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAATATCAAGCTTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	68730246	68708910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712724_68712812_68713228_68713348_68714186_68714374_68714904_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.17	chr13	-	4136	2	ISM	ENSMUSG00000034617.8	ENSMUST00000220544.2	715	4	1088	-3253	1088	-116	intron_retention	FALSE	canonical	3	371	junction_1	0	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACGGTCTCATTTTATA	NA	False	NA	NA	False	GATAAA	-18	NA	68713247	68709014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_68712622_68712718
ES.9551.19	chr13	-	2407	11	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	9	89	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	114.767983340303	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTGTGCGTGGTTGCT	NA	False	NA	-1	True	AATAAA	-21	NA	68730259	68709392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68730183
ES.9551.2	chr13	-	3746	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-47	-7	-19	7	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTTGTGGCTTTTT	NA	False	NA	NA	False	ATTAAA	-32	NA	68730287	68708891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.20	chr13	-	3199	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	9	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	101.650085075805	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTATTGTGTGCGTGGT	NA	False	NA	-5	True	AATAAA	-17	NA	68730259	68709396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68730183
ES.9551.21	chr13	-	3431	15	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	3	85	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	125.771111345092	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTATTGTGTGCGTGGT	NA	False	NA	-5	True	AATAAA	-17	NA	68730229	68709396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68729921
ES.9551.22	chr13	-	3603	15	NIC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	8	85	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	100.027853263836	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTATTGTGTGCGTGGT	NA	False	NA	-5	True	AATAAA	-17	NA	68730205	68709396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729739
ES.9551.23	chr13	-	4955	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-3	83	intron_retention	FALSE	canonical	3	277	junction_9	40.2690654614196	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTATTGTGTGCGTG	NA	False	NA	-7	True	AATAAA	-15	NA	68730216	68709398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.24	chr13	-	3206	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-15	501	13	82	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730255	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.25	chr13	-	3256	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-44	82	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	130.846927236932	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730312	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728662_68728835_68730183
ES.9551.26	chr13	-	4081	12	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-7	82	intron_retention	FALSE	canonical	3	76	junction_8	88.7952422223303	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730247	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.27	chr13	-	3184	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	15	82	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_14	99.3257113680819	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730198	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730148
ES.9551.28	chr13	-	7240	13	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	13	82	intron_retention	FALSE	canonical	3	277	junction_10	38.4855672803311	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730255	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68727816_68728669_68728835_68730183
ES.9551.30	chr13	-	4487	14	ISM	ENSMUSG00000034617.8	ENSMUST00000223398.2	3861	15	36	-82	26	82	intron_retention	FALSE	canonical	3	277	junction_10	43.1618667988553	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730187	68709399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669
ES.9551.31	chr13	-	3061	14	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	1	81	combination_of_known_junctions	FALSE	canonical	3	42	junction_13	116.602191256928	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGCTATTGTGTGCG	NA	False	NA	-9	True	AATAAA	-13	NA	68730222	68709400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68729921
ES.9551.32	chr13	-	5616	7	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-6698	81	intron_retention	FALSE	non_canonical	0	0	junction_6	178.38978857173	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGCTATTGTGTGCG	NA	False	NA	-9	True	AATAAA	-13	NA	68721033	68709400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68714374_68715060_68715571_68716890_68717072_68718122_68718214_68719188
ES.9551.33	chr13	-	5032	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-6	80	intron_retention	FALSE	canonical	3	277	junction_10	42.9267988460775	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730246	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68727816_68728669_68728835_68730183
ES.9551.35	chr13	-	6201	12	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	4	80	intron_retention	FALSE	canonical	3	277	junction_7	40.8963616559495	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730209	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.36	chr13	-	4887	14	NIC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	-59	80	intron_retention	FALSE	canonical	2	3	junction_13	102.694468430163	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730118	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729414
ES.9551.37	chr13	-	3916	15	FSM	ENSMUSG00000034617.8	ENSMUST00000223398.2	3861	15	25	-80	15	80	multi-exon	FALSE	canonical	2	3	junction_14	100.496522429426	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730198	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729414
ES.9551.38	chr13	-	3677	14	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	37	80	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	149.249681593032	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730176	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68714904_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68729414
ES.9551.39	chr13	-	3229	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	30	80	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_14	100.262130926682	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730183	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730086
ES.9551.4	chr13	-	5102	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	1	5	intron_retention	FALSE	canonical	3	76	junction_9	86.0188529076943	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGAGGCTTTGTGGCTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	68730231	68708893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.40	chr13	-	3405	16	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	0	80	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_15	121.716318635679	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730232	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729921_68730044_68730081
ES.9551.41	chr13	-	3075	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-12	80	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTGCTATTGTGTGC	NA	False	NA	-10	True	AATAAA	-12	NA	68730280	68709401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
ES.9551.42	chr13	-	2708	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-19	79	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730287	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
ES.9551.43	chr13	-	3278	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	4	79	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	101.055652479014	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730236	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716796_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.44	chr13	-	2834	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-27	-79	9	79	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730259	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.45	chr13	-	4502	12	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-4	79	intron_retention	FALSE	canonical	0	0	junction_8	133.135610972763	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730244	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68720696_68720820_68725706_68727816_68728669_68728835_68730183
ES.9551.46	chr13	-	3322	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	1	79	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	100.938883307006	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730218	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68714904_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.47	chr13	-	3164	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	79	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	152.454091450508	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730232	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712434_68712622_68712718_68712812_68713228_68713348_68714186_68714368_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68730183
ES.9551.48	chr13	-	4763	12	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	1	79	intron_retention	FALSE	non_canonical	0	0	junction_9	134.180339977076	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTGTGCTATTGTGTG	NA	False	NA	-11	True	AATAAA	-11	NA	68730218	68709402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727675_68727816_68728669_68728835_68730183
ES.9551.49	chr13	-	3434	15	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	2	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	153.873540046788	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730057	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720823_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68729739
ES.9551.5	chr13	-	3340	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-27	-585	9	2	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGAGGCTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-27	NA	68730259	68708896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.50	chr13	-	2695	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-2	75	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	107.18995988431	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730242	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68727661_68727816_68728669_68728835_68730183
ES.9551.51	chr13	-	4018	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-3	75	intron_retention	FALSE	canonical	3	277	junction_9	43.1791369740351	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730235	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.52	chr13	-	3188	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	101.200372065138	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730213	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728866_68730183
ES.9551.53	chr13	-	3613	4	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-1087	75	intron_retention	FALSE	canonical	2	6	junction_1	182.495662048901	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68715422	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710550_68712438_68712622_68712718_68712812_68713228
ES.9551.54	chr13	-	2997	14	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-19	75	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	125.228690211433	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730287	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716751_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.57	chr13	-	3737	15	NNC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	21	75	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	131.984692990034	495	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATCCTGTGCTATTG	NA	False	NA	-15	True	AATAAA	-7	NA	68730038	68709406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727675_68727816_68728669_68728835_68729414
ES.9551.6	chr13	-	3410	13	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	1252	2	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	92.92604586444	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGAGGCTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-27	NA	68728761	68708896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669
ES.9551.61	chr13	-	3146	5	ISM	ENSMUSG00000034617.8	ENSMUST00000223398.2	3861	15	14417	-61	-1471	61	intron_retention	FALSE	canonical	3	349	junction_4	22.6163657557973	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGTATATAAAAGG	NA	False	NA	-29	True	NA	NA	NA	68715806	68709420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186
ES.9551.62	chr13	-	4579	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-3	61	intron_retention	FALSE	canonical	3	76	junction_9	86.0188529076943	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGTATATAAAAGG	NA	False	NA	-29	True	NA	NA	NA	68730235	68709420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.63	chr13	-	2950	14	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	3	61	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	124.446989736345	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAGTATATAAAAGG	NA	False	NA	-29	True	NA	NA	NA	68730237	68709420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68714904_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.64	chr13	-	2755	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-15	952	13	-369	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTACTCTGCCATTTT	NA	False	NA	NA	False	AATATA	-17	NA	68730255	68709850	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.65	chr13	-	1562	4	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	88	-381	intron_retention	FALSE	canonical	3	349	junction_3	11.7284080571728	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATATTTGATATAGTA	NA	False	NA	NA	False	AATATA	-5	NA	68714247	68709862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68713348_68714186
ES.9551.66	chr13	-	2637	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-32	1087	-4	-504	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTGCATGTCTTTAT	NA	False	NA	NA	False	TTTAAA	-21	NA	68730272	68709985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.67	chr13	-	2425	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	-509	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTCTTTTGCATGTC	NA	False	NA	NA	False	TTTAAA	-16	NA	68730219	68709990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
ES.9551.68	chr13	-	2338	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-41	1395	-13	-812	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGTGGCTGTGTGGG	NA	False	NA	NA	False	TTTAAA	-16	NA	68730281	68710293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.69	chr13	-	3705	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	3	-815	intron_retention	FALSE	canonical	3	76	junction_9	86.0188529076943	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGAGGTGGCTGTGT	NA	False	NA	NA	False	TTTAAA	-13	NA	68730237	68710296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ES.9551.7	chr13	-	3309	13	NNC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	-20	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	146.702339411779	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGAGGCTTTGTGGC	NA	False	NA	NA	False	ATTAAA	-27	NA	68730288	68708896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716796_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
ES.9551.70	chr13	-	2647	15	NIC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	49	-830	combination_of_known_junctions	FALSE	canonical	1	5	junction_14	100.027853263836	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTTGGACATTTCT	NA	False	NA	NA	False	NA	NA	NA	68730164	68710311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729739
ES.9551.71	chr13	-	3412	11	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	4	-839	intron_retention	FALSE	canonical	2	2	junction_8	115.062113660405	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGTTTAAAAATGTTTG	NA	False	NA	NA	False	NA	NA	NA	68730209	68710320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68727661_68727816_68728669_68728835_68730183
ES.9551.72	chr13	-	3670	10	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	6337	-899	intron_retention	FALSE	canonical	3	277	junction_9	36.7574633389073	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	68723676	68710380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136
ES.9551.73	chr13	-	2547	14	NIC	ENSMUSG00000034617.8	novel	3861	15	NA	NA	32	-899	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	124.082764896575	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	68730181	68710380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68729414
ES.9551.74	chr13	-	2729	3	ISM	ENSMUSG00000034617.8	ENSMUST00000223398.2	3861	15	18	16561	8	1548	5prime_fragment	FALSE	canonical	2	3	junction_2	202	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCGTGGCCTGTATTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	68730205	68726042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_68727816_68728669_68728835_68729414
ES.9551.75	chr13	-	502	3	ISM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	-12	18058	-4	51	5prime_fragment	FALSE	canonical	3	370	junction_2	18.5	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAGAATTGTCAGTC	NA	False	NA	NA	False	AATAAA	-45	NA	68730244	68727539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_68727816_68728669_68728835_68730183
ES.9551.8	chr13	-	3200	13	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTGAGGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	68730275	68708898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
ES.9551.9	chr13	-	3919	15	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_14	91.4475705706024	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTGAGGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	68730205	68708898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68729921
ES.9552.1	chr13	+	2447	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	-27	1	-13	1	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	68730339	68740456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.10	chr13	+	2618	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	55.7245208343887	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730377	68740397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730738_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.11	chr13	+	855	5	NNC	ENSMUSG00000021532.12	novel	5134	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	73.2188500319419	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730377	68740397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_68730489_68735839_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.12	chr13	+	2689	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	59.418478233253	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730383	68740397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.13	chr13	+	1748	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	56.464344698422	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730383	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730470_68732254_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.14	chr13	+	4741	6	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	2	0	intron_retention	FALSE	canonical	3	43	junction_1	44.5124701628656	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730383	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730470_68731657_68733122_68733296_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.15	chr13	+	2314	7	NNC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	69.2421275108024	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTAAATGTTAATTGT	NA	False	NA	NA	False	AATAAA	-8	NA	68730383	68740391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_68730470_68731657_68733122_68733296_68733383_68735899_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.16	chr13	+	2367	4	ISM	ENSMUSG00000021532.12	ENSMUST00000221006.2	5134	6	3823	59	1275	0	3prime_fragment	FALSE	canonical	3	16	junction_1	65.0538238691624	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68734217	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.2	chr13	+	2689	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	68730345	68740456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.3	chr13	+	2355	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-7	1	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	68730345	68740456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.4	chr13	+	10056	1	Genic_Genomic	ENSMUSG00000021532.12	novel	NA	NA	NA	NA	-7	3	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAATTGTCCGTCTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	68730345	68740401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_68730300_68740400
ES.9552.5	chr13	+	2330	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	70.7106781186548	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTAATTGTCCGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	68730347	68740397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735839_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.6	chr13	+	2550	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	62.1595170151406	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730365	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735839_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.7	chr13	+	2519	7	FSM	ENSMUSG00000021532.12	ENSMUST00000223319.2	2501	7	-15	-3	0	1	multi-exon	FALSE	canonical	3	16	junction_4	60.5658502971949	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTACTCTTGTTACT	NA	False	NA	NA	False	AATAAA	-15	NA	68730366	68740458	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
ES.9552.8	chr13	+	4996	6	NIC	ENSMUSG00000021532.12	novel	5134	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	49	junction_1	42.1473605342019	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730376	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730718_68731657_68733122_68733296_68735954_68737438_68737509_68738224_68738340_68740049
ES.9552.9	chr13	+	4309	6	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	-4	0	intron_retention	FALSE	canonical	3	49	junction_1	42.3631915700411	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730377	68740398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224
ES.9553.1	chr13	+	4427	4	NNC	ENSMUSG00000021534.9	novel	1826	3	NA	NA	8415	-2	intron_retention	FALSE	canonical	0	0	junction_1	8.48528137423857	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTAGCAGCTGTGTTT	NA	False	NA	1	True	AATAAA	-17	NA	68753972	68761404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_68754010_68754416_68758234_68759279_68759397_68760948
ES.9553.2	chr13	+	1548	3	NNC	ENSMUSG00000021534.9	novel	1826	3	NA	NA	8423	0	intron_retention	FALSE	canonical	3	9	junction_1	4.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCTCTCTAATTAATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	68753980	68762350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_68754010_68759279_68759397_68760948
ES.9554.1	chr13	-	4218	25	NNC	ENSMUSG00000021536.8	novel	4211	25	NA	NA	-37	-13	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	1.86664806538351	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCCCGAATCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	69147697	68768174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_68768992_68773906_68774032_68779028_68779144_68788828_68788937_68790575_68790723_68799986_68800129_68805485_68805571_68816588_68816759_68820011_68820132_68826596_68826735_68837379_68837465_68858111_68858210_68861176_68861247_68868822_68868904_68872382_68872427_68875910_68876088_68877325_68877459_68878356_68878516_68880196_68880325_68882742_68882855_68886666_68886816_68944648_68944799_69036077_69036240_69130465_69130664_69147192
ES.9555.1	chr13	+	177	1	Intergenic	novelGene_8002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGTACATGCTTA	NA	False	NA	NA	False	NA	NA	NA	69287297	69287474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_69287300_69287500
ES.9556.1	chr13	+	170	1	Intergenic	novelGene_8003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAGCAAGTTG	NA	False	NA	NA	False	NA	NA	NA	69426942	69427112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_69426900_69427100
ES.9557.1	chr13	+	158	1	Intergenic	novelGene_8004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	630	False	NA	NA	False	NA	NA	NA	69612900	69613058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_69612900_69613100
ES.9558.1	chr13	+	4222	1	Intergenic	novelGene_8005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTAATTTGACTCTGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	69670821	69675043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_69670800_69675000
ES.9559.10	chr13	-	4415	3	ISM	ENSMUSG00000034575.14	ENSMUST00000223344.3	2118	13	27828	-1283	27828	-313	intron_retention	FALSE	canonical	3	61	junction_1	6.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCCATAGCCTGTACTAA	NA	False	NA	NA	False	TTTAAA	-37	NA	69652723	69646393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_69648230_69648591_69648757_69650309
ES.9559.12	chr13	-	3280	13	FSM	ENSMUSG00000034575.14	ENSMUST00000198607.5	4750	13	-33	1503	-33	96	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATATTTTTTATTTAA	NA	False	NA	NA	False	NA	NA	NA	69682769	69647580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.9559.13	chr13	-	3094	6	NIC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	25345	91	intron_retention	FALSE	canonical	3	61	junction_1	14.0712472794703	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTCAGATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	69655206	69647585	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_69648230_69648591_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034
ES.9559.2	chr13	-	4162	12	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-4	15	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	27.0126997986729	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTAGTTTCTGCAT	NA	False	NA	2	True	AATAAA	-30	NA	69682309	69646062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_69648227_69648591_69648757_69650309_69650469_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.9559.3	chr13	-	4810	13	FSM	ENSMUSG00000034575.14	ENSMUST00000198607.5	4750	13	-45	-15	-45	15	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGGTAGTTTCTGCAT	NA	False	NA	2	True	AATAAA	-30	NA	69682781	69646062	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.9559.4	chr13	-	4779	13	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-27	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	23.8413448073346	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTTTCCTCTGAAGGGT	NA	False	NA	-14	True	AATAAA	-14	NA	69682763	69646078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_69648233_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.9559.5	chr13	-	4665	13	NNC	ENSMUSG00000034575.14	novel	3994	13	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.9842251397779	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTTTTCCTCTGAAGG	NA	False	NA	-16	True	AATAAA	-12	NA	69682763	69646080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651089_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.9559.6	chr13	-	4488	14	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	29.9885579757923	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATACTTTTCCTCTGAAG	NA	False	NA	-17	True	AATAAA	-11	NA	69682331	69646081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69665733_69665881_69681606
ES.9559.7	chr13	-	4785	13	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	-44	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	27.053830084153	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATACTTTTCCTCTGAAG	NA	False	NA	-17	True	AATAAA	-11	NA	69682780	69646081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_69648227_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663125_69663894_69664023_69681606
ES.9559.9	chr13	-	3966	13	FSM	ENSMUSG00000034575.14	ENSMUST00000044081.9	3994	13	-284	312	38	-312	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCATAGCCTGTACTAAT	NA	False	NA	NA	False	TTTAAA	-38	NA	69682267	69646392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ES.956.1	chr1	-	3473	1	Antisense	novelGene_ENSMUSG00000026289.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAGATTCTGTCCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	87683643	87680170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87680200_87683600
ES.9560.1	chr13	+	192	1	Intergenic	novelGene_8006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACCGGGTAAATGGG	NA	False	NA	NA	False	NA	NA	NA	69719671	69719863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_69719700_69719900
ES.9561.1	chr13	-	2681	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	-38	1	-38	-1	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATTGTTTGTCTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	69759599	69721568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
ES.9561.2	chr13	-	1519	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	-14	1139	-14	46	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAATAAATAAATAAATA	NA	False	NA	NA	False	ATTAAA	-7	NA	69759575	69722706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
ES.9561.3	chr13	-	984	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	-23	1683	-23	-498	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCTGTCCATGCTGTT	NA	False	NA	NA	False	AAGAAA	-24	NA	69759584	69723250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
ES.9561.4	chr13	-	977	1	ISM	ENSMUSG00000091133.2	ENSMUST00000168625.2	2877	2	3427	0	3427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTCTTATCTTTAACT	NA	False	NA	NA	False	AATAAA	-16	NA	69759593	69758616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_69758600_69759600
ES.9562.1	chr13	+	3074	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	-231	-9	-231	9	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTTGGATTTGCTTTT	NA	False	NA	40	True	AATAAA	-28	NA	69759903	69782462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.10	chr13	+	3301	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	4	0	intron_retention	FALSE	canonical	3	1529	junction_7	131.794376911411	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760138	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.11	chr13	+	3114	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	5	0	intron_retention	FALSE	canonical	3	1529	junction_7	125.769052915573	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760139	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.12	chr13	+	3220	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	7	0	intron_retention	FALSE	canonical	3	1529	junction_7	135.619812579187	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760141	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.13	chr13	+	2880	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	467.739943046334	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760142	69782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767511_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.14	chr13	+	7789	16	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	8	0	intron_retention	FALSE	canonical	3	1835	junction_15	85.6456783627885	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760142	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69763637_69765524_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.15	chr13	+	2775	20	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	8	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	457.219665712972	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760142	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760205_69760254_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.16	chr13	+	2733	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	476.574534776284	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760142	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.17	chr13	+	5687	16	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	8	-1	intron_retention	FALSE	non_canonical	0	0	junction_7	495.636650066244	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760142	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767986_69768061_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69778214_69778746_69779790_69781346_69781387_69781690
ES.9562.18	chr13	+	4270	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	10	-1446	10	0	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGTGTGTGCTTGTATT	NA	False	NA	NA	False	AGTAAA	-37	NA	69760144	69783899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.2	chr13	+	2821	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	-231	244	-231	44	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTATCTATCTATGCTT	NA	False	NA	NA	False	AGTAAA	-23	NA	69759903	69782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.20	chr13	+	2849	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_5	466.225413080914	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760144	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765622_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.21	chr13	+	3307	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1529	junction_7	136.215176813979	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760144	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.23	chr13	+	3921	17	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	11	-1	intron_retention	FALSE	canonical	3	1529	junction_6	135.832258111798	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760145	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.24	chr13	+	10683	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	11	-7860	11	6414	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGATTTTTATGGTGA	NA	False	NA	NA	False	NA	NA	NA	69760145	69790313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.25	chr13	+	2722	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_18	468.386473853472	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760145	69782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781792
ES.9562.26	chr13	+	4722	14	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	11	1	intron_retention	FALSE	canonical	3	1529	junction_7	133.545418110188	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760145	69782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69779790_69781346_69781387_69781690
ES.9562.27	chr13	+	2813	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	462.835103825686	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69760146	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769729_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.28	chr13	+	4705	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-16	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	462.835103825686	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTGGCATGAGACTTG	NA	False	NA	29	True	AATAAA	-17	NA	69760151	69782451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767986_69768061_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.29	chr13	+	2780	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	469.32433703499	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760153	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779685_69779790_69781346_69781387_69781690
ES.9562.3	chr13	+	2789	19	NNC	ENSMUSG00000021595.19	novel	4164	18	NA	NA	-213	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	467.334165477148	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69759921	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760053_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.30	chr13	+	4697	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	20	-1883	-13	437	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCTAGGGAACAGAAAAAC	NA	False	NA	NA	False	AAAACA	-17	NA	69760154	69784336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.31	chr13	+	3500	17	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-12	0	intron_retention	FALSE	canonical	3	1529	junction_7	135.813233431061	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760155	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779790_69781346_69781387_69781690
ES.9562.34	chr13	+	2716	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	469.143532749827	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760157	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763566_69765548_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.35	chr13	+	2853	20	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	615.617438857064	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760157	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69768554_69768597_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.36	chr13	+	4772	18	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_13	476.215727045129	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760158	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778750_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.37	chr13	+	4066	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	1	intron_retention	FALSE	canonical	3	1529	junction_6	136.050062025574	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760158	69782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.38	chr13	+	2749	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	469.589839417284	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69760158	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761129_69763555_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.39	chr13	+	3671	17	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	1529	junction_7	134.330268717627	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69760158	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.40	chr13	+	5451	16	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	1835	junction_15	71.2006242169891	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69760158	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.41	chr13	+	3308	18	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-9	-1	intron_retention	FALSE	non_canonical	0	0	junction_14	479.149130515079	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760158	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778849_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.43	chr13	+	5054	17	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	1835	junction_16	70.4562974030711	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760164	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.44	chr13	+	3031	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-3	44	intron_retention	FALSE	canonical	3	1529	junction_7	131.794376911411	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTATCTATCTATGCTT	NA	False	NA	NA	False	AGTAAA	-23	NA	69760164	69782209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.46	chr13	+	5391	17	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-3	0	intron_retention	FALSE	non_canonical	0	0	junction_7	489.206176978327	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760164	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767986_69768061_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346
ES.9562.47	chr13	+	5645	16	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-3	-1	intron_retention	FALSE	canonical	1	39	junction_11	484.118424446838	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760164	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69777848_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.48	chr13	+	2797	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	469.080453890612	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCTTGGCATGAGACT	NA	False	NA	27	True	AATAAA	-15	NA	69760165	69782449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765602_69766231_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.49	chr13	+	6931	16	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-2	-1	intron_retention	FALSE	canonical	3	1835	junction_15	72.1419588188609	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760165	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.50	chr13	+	2794	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	468.315213172591	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTGGCATGAGACTTG	NA	False	NA	29	True	AATAAA	-17	NA	69760165	69782451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774664_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.52	chr13	+	2765	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_15	462.106529324618	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760172	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778853_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.53	chr13	+	2790	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	468.82740842328	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760172	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760572_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.56	chr13	+	4086	16	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	5	1	intron_retention	FALSE	canonical	3	1529	junction_7	126.641471178371	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGCATGAGACTTGGAT	NA	False	NA	32	True	AATAAA	-20	NA	69760172	69782454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.57	chr13	+	8729	13	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_7	547.560575035615	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760173	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767986_69768061_69769799_69771281_69771413_69774596_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.58	chr13	+	4137	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	39	-1342	6	-104	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTTCTTTTCAATTT	NA	False	NA	NA	False	AATGAA	-14	NA	69760173	69783795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.59	chr13	+	2761	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	469.636213296533	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760173	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778779_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.6	chr13	+	3137	18	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	0	1	0	-1	intron_retention	FALSE	canonical	3	1529	junction_7	132.90160785424	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760134	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346
ES.9562.60	chr13	+	4733	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	629.523935845548	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCTTGGCATGAGACT	NA	False	NA	27	True	AATAAA	-15	NA	69760174	69782449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767511_69767986_69768061_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.61	chr13	+	4470	15	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	13	0	intron_retention	FALSE	canonical	3	1529	junction_7	128.696625552387	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760180	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.62	chr13	+	2717	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	462.835103825686	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760182	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767727_69769760_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.63	chr13	+	2069	13	NNC	ENSMUSG00000021595.19	novel	2408	18	NA	NA	25	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	558.83248831828	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69760192	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760323_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.65	chr13	+	2763	18	FSM	ENSMUSG00000021595.19	ENSMUST00000022087.7	4164	18	-45	1446	-45	0	multi-exon	FALSE	canonical	3	1529	junction_6	134.755603461822	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760317	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.66	chr13	+	6260	14	NNC	ENSMUSG00000021595.19	novel	4164	18	NA	NA	56	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	533.2337986509	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	NA	False	NA	30	True	AATAAA	-18	NA	69760418	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69766310_69767564_69767983_69768057_69769799_69771281_69771413_69774596_69774671_69775154_69775776_69777653_69777836_69778120_69778214_69778746_69779790_69781346_69781387_69781690
ES.9562.67	chr13	+	4467	18	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	142	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	474.177072615043	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760504	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767993_69768067_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.68	chr13	+	2219	14	ISM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	6088	3	-3207	-3	3prime_fragment	FALSE	canonical	3	1529	junction_2	153.382802242196	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTTGGCATGAGACTT	NA	False	NA	28	True	AATAAA	-16	NA	69766222	69782450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.69	chr13	+	4300	12	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-2064	0	intron_retention	FALSE	canonical	3	1835	junction_11	97.3067060449706	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69767365	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.70	chr13	+	2734	11	NNC	ENSMUSG00000021595.19	novel	4164	18	NA	NA	-35	-4	intron_retention	FALSE	non_canonical	0	0	junction_9	600.431544807566	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCTTGGCATGAGACT	NA	False	NA	27	True	AATAAA	-15	NA	69769394	69782449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779786_69781346_69781387_69781690
ES.9562.71	chr13	+	3811	5	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	-2826	0	intron_retention	FALSE	canonical	3	1835	junction_4	69.0954955116468	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	3252	False	NA	31	True	AATAAA	-19	NA	69776032	69782453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.72	chr13	+	1153	6	NIC	ENSMUSG00000021595.19	novel	4164	18	NA	NA	-1061	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	806.167873336565	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGCATGAGACTTGG	5017	False	NA	30	True	AATAAA	-18	NA	69777797	69782452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69777836_69778120_69778214_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ES.9562.8	chr13	+	2824	19	NNC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	469.32433703499	1305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTGGCATGAGACTTG	NA	False	NA	29	True	AATAAA	-17	NA	69760136	69782451	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779429_69779650_69779790_69781346_69781387_69781690
ES.9563.1	chr13	-	179	1	Intergenic	novelGene_8007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAGGCAGTGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	69895483	69895304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_69895300_69895500
ES.9564.1	chr13	+	908	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	7	-2	7	2	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTAATTCTTAAAATGT	NA	False	NA	29	True	AATAAA	-25	NA	69957966	69964225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
ES.9564.2	chr13	+	6251	1	NIC	ENSMUSG00000021598.10	novel	913	4	NA	NA	8	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTTCATGTAATTCTT	NA	False	NA	22	True	AATAAA	-18	NA	69957967	69964218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_69958000_69964200
ES.9564.3	chr13	+	3113	3	NNC	ENSMUSG00000021598.10	novel	815	3	NA	NA	8	2	intron_retention	FALSE	canonical	0	0	junction_1	412.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATGTAATTCTTAAA	NA	False	NA	25	True	AATAAA	-21	NA	69957967	69964221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69958598_69959725_69959810_69961822
ES.9564.4	chr13	+	2451	3	FSM	ENSMUSG00000021598.10	ENSMUST00000220649.2	451	3	-1731	-269	13	1	multi-exon	FALSE	canonical	3	786	junction_2	19.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCATGTAATTCTTAA	NA	False	NA	24	True	AATAAA	-20	NA	69957972	69964220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69959810_69961822_69961926_69963709
ES.9564.5	chr13	+	1164	4	NNC	ENSMUSG00000021598.10	novel	913	4	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	380.049996710959	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCATGTAATTCTTAA	NA	False	NA	24	True	AATAAA	-20	NA	69957981	69964220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_69958448_69959725_69959810_69961822_69961926_69963709
ES.9564.7	chr13	+	2659	3	FSM	ENSMUSG00000021598.10	ENSMUST00000221893.2	815	3	-45	-1799	-22	-6	multi-exon	FALSE	canonical	3	811	junction_1	7	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCTCATTTCATGTAA	-6	True	NA	17	True	AATAAA	-13	NA	69957987	69964213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69958172_69959725_69959810_69961822
ES.9564.8	chr13	+	4674	2	ISM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	32	4	-18	0	intron_retention	FALSE	canonical	3	811	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCATGTAATTCTTA	-2	True	NA	23	True	AATAAA	-19	NA	69957991	69964219	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_69958172_69959725
ES.9564.9	chr13	+	4213	2	FSM	ENSMUSG00000021598.10	ENSMUST00000221045.2	4197	2	-17	1	-17	-1	multi-exon	FALSE	canonical	3	825	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTTCATGTAATTCTT	-1	True	NA	22	True	AATAAA	-18	NA	69957992	69964218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_69959810_69961822
ES.9565.1	chr13	-	176	1	Intergenic	novelGene_8008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAAATGGGATTCA	NA	False	NA	NA	False	NA	NA	NA	70247497	70247321	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_70247300_70247500
ES.9566.1	chr13	+	272	1	Intergenic	novelGene_8009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTTCTTTTCTTT	2629	False	NA	NA	False	AAAACA	-8	NA	70652829	70653101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_70652800_70653100
ES.9567.1	chr13	-	7897	19	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-210	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	40.7369232218174	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTTGATGTCCCA	NA	False	NA	11	True	AATAAA	-39	NA	70785963	70736795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.10	chr13	-	8399	14	ISM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	17499	-1	-11316	-1	3prime_fragment	FALSE	canonical	3	97	junction_13	25.0256672971699	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTGATTGTTTTA	NA	False	NA	-8	True	AATAAA	-20	NA	70768254	70736814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103
ES.9567.11	chr13	-	7827	18	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-163	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	45.5124607447783	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTGATTGTTTTA	NA	False	NA	-8	True	AATAAA	-20	NA	70785916	70736814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749184_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768901_70772040_70772077_70772526_70772586_70785635
ES.9567.12	chr13	-	7905	20	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	12019	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	58.5917846623304	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGTTGTGATTGTTTT	NA	False	NA	-9	True	AATAAA	-19	NA	70773734	70736815	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70767691_70767830_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70773516
ES.9567.14	chr13	-	8138	12	NIC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-10755	-3	intron_retention	FALSE	canonical	3	97	junction_11	26.0295445615678	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACACTGTTGTGATTGT	NA	False	NA	-12	True	AATAAA	-16	NA	70767693	70736818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763536_70765215_70765254_70767103
ES.9567.16	chr13	-	9950	17	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-165	-5	intron_retention	FALSE	non_canonical	0	0	junction_11	51.6475056875935	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACACACTGTTGTGATT	NA	False	NA	-14	True	AATAAA	-14	NA	70785918	70736820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70757296_70758652_70758740_70763051_70763109_70763192_70763536_70765215_70765254_70767099_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.17	chr13	-	7815	19	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-158	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	53.7868736568485	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACACACTGTTGTGATT	NA	False	NA	-14	True	AATAAA	-14	NA	70785911	70736820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763102_70763188_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768887_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.18	chr13	-	3489	7	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-1267	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.3400088388017	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATACACACTGTTGTGAT	NA	False	NA	-15	True	AATAAA	-13	NA	70751951	70736821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743045_70744269_70744465_70747168_70747330_70749186_70749356_70750297
ES.9567.2	chr13	-	7938	20	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-165	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	52.7379976761724	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTTTATGTGGTG	NA	False	NA	-1	True	AATAAA	-27	NA	70785918	70736807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70760019_70760118_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.20	chr13	-	4964	5	NIC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	960	-8	intron_retention	FALSE	canonical	3	141	junction_1	15.7003184681076	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATACACACTGTTGTG	359	False	NA	-17	True	AATAAA	-11	NA	70749724	70736823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186
ES.9567.21	chr13	-	8054	20	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-181	-24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.7789272324518	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATAAAAGCAAGC	NA	False	NA	-33	True	NA	NA	NA	70785934	70736839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744452_70747168_70747330_70749186_70749356_70750297_70754996_70756428_70756672_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.23	chr13	-	3314	1	NIC	ENSMUSG00000034525.8	novel	2195	7	NA	NA	2343	-8212	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	1742	False	NA	NA	False	NA	NA	NA	70748341	70745027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_70745000_70748300
ES.9567.24	chr13	-	858	6	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-159	-15660	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	52.3526503627085	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTCTTAATTTTTGTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	70785912	70770534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70770781_70771205_70771323_70771469_70771594_70772041_70772077_70772526_70772586_70785635
ES.9567.3	chr13	-	7724	16	NIC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-165	3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_15	39.8026241457632	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATTGTTTTATGTG	NA	False	NA	-4	True	AATAAA	-24	NA	70785918	70736810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70785635
ES.9567.4	chr13	-	8020	20	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-194	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	53.7586171666235	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATTGTTTTATGTG	NA	False	NA	-4	True	AATAAA	-24	NA	70785947	70736810	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70760615_70760770_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9567.5	chr13	-	7840	18	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-172	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	38.749930237687	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTGATTGTTTTATG	NA	False	NA	-6	True	AATAAA	-22	NA	70785925	70736812	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70772024_70772077_70772526_70772586_70785635
ES.9567.6	chr13	-	8172	4	NIC	ENSMUSG00000034525.8	novel	2195	7	NA	NA	-381	0	intron_retention	FALSE	canonical	3	141	junction_1	9.67241208569794	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTGATTGTTTTAT	NA	False	NA	-7	True	AATAAA	-21	NA	70751065	70736813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_70740791_70742943_70743051_70744273_70744465_70747168
ES.9567.7	chr13	-	7791	19	NNC	ENSMUSG00000034525.8	novel	7667	19	NA	NA	-160	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	47.7135550271968	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTTGTGATTGTTTTA	NA	False	NA	-8	True	AATAAA	-20	NA	70785913	70736814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749319_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769574_70772039_70772077_70772526_70772586_70785635
ES.9568.1	chr13	-	178	1	Intergenic	novelGene_8010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70842893	70842715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_70842700_70842900
ES.9569.1	chr13	-	687	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	-20	-88	-20	88	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	72603479	72602792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_72602800_72603500
ES.957.1	chr1	-	2578	2	Antisense	novelGene_ENSMUSG00000026289.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAAAAAAGCCTGTT	NA	False	NA	NA	False	NA	NA	NA	87691887	87688777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87689105_87689636
ES.9570.1	chr13	+	2383	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-94	336	-94	92	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-16	NA	72776844	72781981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
ES.9570.2	chr13	+	3562	3	ISM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-49	329	-49	99	intron_retention	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTTGGGGCTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	72776889	72781988	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_72777433_72778689_72779096_72779375
ES.9570.3	chr13	+	2653	5	NIC	ENSMUSG00000001504.11	novel	2625	5	NA	NA	-43	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	5.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTCATCTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72776895	72782315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780768_72781382
ES.9570.4	chr13	+	2344	5	NNC	ENSMUSG00000001504.11	novel	2625	5	NA	NA	-41	93	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.25999201277446	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATGGTGTTTGGGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	72776897	72781982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_72777433_72778672_72779096_72779375_72780090_72780704_72780781_72781386
ES.9570.5	chr13	+	2635	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	-12	2	-12	-2	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTCATCTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72776926	72782315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
ES.9570.6	chr13	+	3166	3	NIC	ENSMUSG00000001504.11	novel	2625	5	NA	NA	18	92	intron_retention	FALSE	canonical	3	13	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-16	NA	72776956	72781981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_72777433_72778689_72780781_72781382
ES.9570.7	chr13	+	2886	4	NIC	ENSMUSG00000001504.11	novel	2625	5	NA	NA	18	92	intron_retention	FALSE	canonical	3	13	junction_1	5.65685424949238	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGGTGTTTGGGGC	NA	False	NA	NA	False	AATAAA	-16	NA	72776956	72781981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_72777433_72778689_72779096_72779375_72780781_72781382
ES.9570.8	chr13	+	3823	3	ISM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	18	1	18	-1	intron_retention	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTCATCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	72776956	72782316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_72777433_72778689_72779096_72779375
ES.9571.1	chr13	-	178	1	Intergenic	novelGene_8011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGATATACATTC	NA	False	NA	NA	False	NA	NA	NA	72935625	72935447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_72935400_72935600
ES.9572.1	chr13	+	311	1	FSM	ENSMUSG00000066407.4	ENSMUST00000085163.4	300	1	-13	2	-13	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGTTTCTAT	NA	False	NA	NA	False	AATAAA	-10	NA	73465949	73466260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73465900_73466300
ES.9573.1	chr13	+	2254	1	Intergenic	novelGene_8012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACGGCAAGTACCAGAC	5419	False	NA	NA	False	NA	NA	NA	73472767	73475021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73472800_73475000
ES.9574.1	chr13	+	1168	3	NNC	ENSMUSG00000021607.10	novel	923	2	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	311.5	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGAGTAGTAGTGTTC	9247	False	NA	12	True	ATTAAA	-25	NA	73476595	73480296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73476723_73478987_73479211_73479478
ES.9574.2	chr13	+	1143	3	FSM	ENSMUSG00000021607.10	ENSMUST00000221730.2	717	3	13	-439	13	-3	multi-exon	FALSE	canonical	3	17	junction_1	303	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	9296	False	NA	10	True	ATTAAA	-23	NA	73476644	73480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73476740_73478978_73479211_73479478
ES.9574.3	chr13	+	1734	3	NNC	ENSMUSG00000021607.10	novel	717	3	NA	NA	38	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	311.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	9321	False	NA	10	True	ATTAAA	-23	NA	73476669	73480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73477356_73478978_73479211_73479478
ES.9574.4	chr13	+	2345	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	-1425	3	1050	-3	multi-exon	FALSE	canonical	3	623	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	NA	False	NA	10	True	ATTAAA	-23	NA	73477681	73480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73479211_73479478
ES.9574.5	chr13	+	520	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	3	400	3	42	multi-exon	FALSE	canonical	3	623	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACCCCCCTTTCCCC	NA	False	NA	39	True	AATAAA	-39	NA	73479109	73479897	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73479211_73479478
ES.9574.6	chr13	+	1243	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	29	-349	-9	349	multi-exon	FALSE	canonical	3	623	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTCATGTTTCT	NA	False	NA	NA	False	NA	NA	NA	73479135	73480646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73479211_73479478
ES.9574.8	chr13	+	1154	1	NIC	ENSMUSG00000021607.10	novel	923	2	NA	NA	-4	-3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	NA	False	NA	10	True	ATTAAA	-23	NA	73479140	73480294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73479100_73480300
ES.9574.9	chr13	+	992	2	NNC	ENSMUSG00000021607.10	novel	923	2	NA	NA	59	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGAGTAGTAGTGTTC	NA	False	NA	12	True	ATTAAA	-25	NA	73479203	73480296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73479378_73479478
ES.9575.1	chr13	-	637	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	-64	-5	-64	-2	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTCTTCCTTTCATA	NA	False	NA	2	True	AATAAA	-24	NA	73476725	73467987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ES.9575.2	chr13	-	5106	1	NIC	ENSMUSG00000021606.9	novel	757	3	NA	NA	3472	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGAGTTGTTTCTTCCT	NA	False	NA	-4	True	AATAAA	-18	NA	73473099	73467993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_73468000_73473100
ES.9575.3	chr13	-	551	5	NNC	ENSMUSG00000021606.9	novel	568	4	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1184.05996469773	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476565	73467994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_73468180_73468412_73468536_73473349_73473431_73475534_73475589_73476457
ES.9575.4	chr13	-	536	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	1	-3	1	-2	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGAGTTGTTTCTTCC	NA	False	NA	-5	True	AATAAA	-17	NA	73476570	73467994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
ES.9576.1	chr13	+	4181	1	Intergenic	novelGene_8013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-40	NA	73488186	73492367	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73488200_73492400
ES.9577.3	chr13	-	1214	4	NNC	ENSMUSG00000113346.3	novel	1306	3	NA	NA	-1059	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.9768406778059	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCTGAGTTCAAATCC	NA	False	NA	0	True	NA	NA	NA	73496562	73492783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_73493358_73494614_73495181_73495337_73495382_73496532
ES.9577.4	chr13	-	1272	3	NNC	ENSMUSG00000113346.3	novel	1306	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCTGAGTTCAAATCC	NA	False	NA	0	True	NA	NA	NA	73495517	73492783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_73493310_73494614_73495181_73495337
ES.9577.5	chr13	-	2536	2	NIC	ENSMUSG00000113346.3	novel	1306	3	NA	NA	20	-7	intron_retention	FALSE	canonical	3	37	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCGAAGGTCCTGAGTT	NA	False	NA	-7	True	NA	NA	NA	73495483	73492790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_73495181_73495337
ES.9578.1	chr13	+	174	1	Intergenic	novelGene_8014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	73547129	73547303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73547100_73547300
ES.9579.1	chr13	+	208	1	Intergenic	novelGene_8015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGTGCATCTGACTGA	NA	False	NA	NA	False	NA	NA	NA	73586376	73586584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73586400_73586600
ES.958.1	chr1	+	157	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	87737051	87737208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_87737100_87737200
ES.9580.1	chr13	+	3471	14	NNC	ENSMUSG00000021608.16	novel	719	6	NA	NA	-14307	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.79831676052	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGAGTGTGTTTT	NA	False	NA	21	True	AATAAA	-21	NA	73601008	73664539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73601128_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.10	chr13	+	3622	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	-4	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	160.646990701045	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTTTACAGGCTCGA	NA	False	NA	12	True	AATAAA	-12	NA	73615345	73664530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659506_73661938_73662081_73662472
ES.9580.11	chr13	+	2333	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	33	1309	-1	1	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	TATAAA	-39	NA	73615348	73663232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.12	chr13	+	3621	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	0	-11	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	161.039228562778	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTTTACAGGCTCGA	NA	False	NA	12	True	AATAAA	-12	NA	73615349	73664530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659112_73659418_73659518_73661938_73662081_73662472
ES.9580.13	chr13	+	2972	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	35	668	1	629	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACTGTAGGTTTAGTTT	NA	False	NA	NA	False	NA	NA	NA	73615350	73663873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.15	chr13	+	3494	13	FSM	ENSMUSG00000021608.16	ENSMUST00000123766.8	3532	13	35	3	1	-3	multi-exon	FALSE	canonical	0	0	junction_1	170.128301257871	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGCTCGAGTGTGTTT	NA	False	NA	20	True	AATAAA	-20	NA	73615350	73664538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73615637_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.16	chr13	+	3568	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	2	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	161.412038441518	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615351	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662537
ES.9580.17	chr13	+	3648	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	4	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	161.412038441518	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615353	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662455
ES.9580.18	chr13	+	5277	13	NIC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	5	-9	intron_retention	FALSE	canonical	3	461	junction_9	75.7995804004804	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	False	NA	14	True	AATAAA	-14	NA	73615354	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.19	chr13	+	2520	9	ISM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	41	9362	7	-4546	5prime_fragment	FALSE	canonical	3	463	junction_4	64.5812230838036	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATACACTTTTATTACT	NA	False	NA	NA	False	NA	NA	NA	73615356	73655179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620
ES.9580.2	chr13	+	3406	14	NNC	ENSMUSG00000021608.16	novel	719	6	NA	NA	-6055	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.79831676052	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTTTACAGGCTCGA	5120	False	NA	12	True	AATAAA	-12	NA	73609260	73664530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73609324_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.20	chr13	+	2585	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	42	1048	8	249	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAAAGTCTACTTCAT	NA	False	NA	NA	False	TATAAA	-29	NA	73615357	73663493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.23	chr13	+	3833	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	164.391004519298	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615370	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649729_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.24	chr13	+	3547	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	21	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTTACAGGCTCGAG	NA	False	NA	13	True	AATAAA	-13	NA	73615370	73664531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472_73663088_73663150
ES.9580.26	chr13	+	3520	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	23	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615372	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472_73663523_73663614
ES.9580.27	chr13	+	3504	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	31	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615380	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472_73663503_73663602
ES.9580.28	chr13	+	3545	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	33	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615382	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472_73663233_73663289
ES.9580.29	chr13	+	1864	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	33	195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	161.039228562778	600	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTTTCTGTAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	73615382	73662799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659420_73659518_73661938_73662081_73662472
ES.9580.3	chr13	+	3701	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	-24	-2	-24	2	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCGAGTGTGTTTTGTTA	NA	False	NA	25	True	AATAAA	-25	NA	73615291	73664543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.31	chr13	+	2211	13	NIC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	60	1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	170.011825569086	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	TATAAA	-39	NA	73615409	73663232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.32	chr13	+	3445	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	77	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73615426	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615477_73615589_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.33	chr13	+	3152	15	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	88	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	158.942246602664	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	False	NA	14	True	AATAAA	-14	NA	73615437	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472_73662562_73662953
ES.9580.34	chr13	+	3547	14	NNC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	164.56066667874	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCGAGTGTGTTTTGT	NA	False	NA	23	True	AATAAA	-23	NA	73615625	73664541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73615819_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.35	chr13	+	3621	14	NNC	ENSMUSG00000021608.16	novel	719	6	NA	NA	-1794	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	164.79831676052	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	False	NA	14	True	AATAAA	-14	NA	73618075	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73618352_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.36	chr13	+	3358	13	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	12505	-1296	12505	-1	3prime_fragment	FALSE	canonical	3	461	junction_9	77.5320722167428	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCTCGAGTGTGTTTTG	5183	False	NA	22	True	AATAAA	-22	NA	73632374	73664540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.37	chr13	+	3025	11	NIC	ENSMUSG00000021608.16	novel	3532	13	NA	NA	-13896	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	174.262330984066	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	9892	False	NA	14	True	AATAAA	-14	NA	73637083	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73661938_73662081_73662472
ES.9580.38	chr13	+	3068	10	NIC	ENSMUSG00000021608.16	novel	2141	14	NA	NA	-8198	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	194.877992853902	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACAGGCTCGAGTGTG	NA	False	NA	17	True	AATAAA	-17	NA	73642781	73664535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73643034_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.39	chr13	+	7023	9	NIC	ENSMUSG00000021608.16	novel	2141	14	NA	NA	-7772	-9	intron_retention	FALSE	canonical	3	461	junction_5	78.3077861709805	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	False	NA	14	True	AATAAA	-14	NA	73643207	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.40	chr13	+	6916	8	NIC	ENSMUSG00000021608.16	novel	2141	14	NA	NA	-6933	-3	intron_retention	FALSE	canonical	3	476	junction_1	69.6680174331179	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGCTCGAGTGTGTTT	NA	False	NA	20	True	AATAAA	-20	NA	73644046	73664538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.41	chr13	+	896	1	Intergenic	novelGene_8017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	553	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAATAAAAAGAGAAACCTT	3180	False	NA	NA	False	NA	NA	NA	73651367	73652263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73651400_73652300
ES.9580.42	chr13	+	4560	2	FSM	ENSMUSG00000021608.16	ENSMUST00000222881.2	691	2	-1935	-1934	519	-3	multi-exon	FALSE	canonical	3	629	junction_1	0	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGCTCGAGTGTGTTT	NA	False	NA	20	True	AATAAA	-20	NA	73659586	73664538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73662081_73662472
ES.9580.43	chr13	+	2408	1	NIC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	603	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	False	NA	14	True	AATAAA	-14	NA	73662124	73664532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73662100_73664500
ES.9580.7	chr13	+	6707	13	NIC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	461	junction_9	73.7200033158497	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGAGTGTGTTTT	NA	False	NA	21	True	AATAAA	-21	NA	73615339	73664539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9580.8	chr13	+	3580	13	NIC	ENSMUSG00000021608.16	novel	3675	14	NA	NA	-10	-10	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	170.011825569086	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTTACAGGCTCGAG	NA	False	NA	13	True	AATAAA	-13	NA	73615339	73664531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ES.9581.1	chr13	-	1252	1	Intergenic	novelGene_8016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGAAAGGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73635128	73633876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_73633900_73635100
ES.9582.1	chr13	-	3254	1	Antisense	novelGene_ENSMUSG00000021608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCATATCAGGACCTC	NA	False	NA	NA	False	NA	NA	NA	73647871	73644617	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_73644600_73647900
ES.9583.1	chr13	-	3909	1	Antisense	novelGene_ENSMUSG00000021608.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAAATATGATTTTA	NA	False	NA	NA	False	NA	NA	NA	73654888	73650979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_73651000_73654900
ES.9584.1	chr13	-	182	1	Intergenic	novelGene_8018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	73678744	73678562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_73678600_73678700
ES.9585.1	chr13	+	3455	15	NNC	ENSMUSG00000021609.7	novel	3456	15	NA	NA	-9	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1.63038745864476	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCAGGGTCATCCATGC	NA	False	NA	NA	False	AATAAA	-14	NA	73684856	73726787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73684980_73686591_73686921_73688963_73689096_73692799_73693032_73705160_73705300_73706268_73706404_73709001_73709106_73710425_73710545_73714389_73714503_73715632_73715762_73716303_73716404_73717986_73718088_73719568_73719737_73720918_73720991_73725328
ES.9585.2	chr13	+	5163	6	NIC	ENSMUSG00000021609.7	novel	3456	15	NA	NA	27635	-2	intron_retention	FALSE	canonical	0	0	junction_1	2.22710574513201	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGGGTCATCCATGCTG	8779	False	NA	NA	False	AATAAA	-16	NA	73712500	73726789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73715762_73716303_73716404_73717986_73718088_73719568_73719737_73720918_73720991_73725328
ES.9586.1	chr13	+	176	1	Intergenic	novelGene_8019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAATGTGATT	NA	False	NA	NA	False	NA	NA	NA	73748575	73748751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73748600_73748800
ES.9587.1	chr13	+	2420	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	-55	-25	-55	25	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAGAAAATATTGCG	NA	False	NA	46	True	AATAAA	-41	NA	73752069	73768749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.10	chr13	+	3022	16	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	85	-2	intron_retention	FALSE	canonical	3	235	junction_7	20.6037752743412	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTTAACCTCTA	NA	False	NA	19	True	AATAAA	-14	NA	73752209	73768722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.11	chr13	+	3758	16	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	94	3	94	-3	intron_retention	FALSE	canonical	3	235	junction_7	20.0481642274022	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTTTCTTAACCTCT	NA	False	NA	18	True	AATAAA	-13	NA	73752218	73768721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520
ES.9587.12	chr13	+	3433	16	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	96	-2	intron_retention	FALSE	canonical	3	235	junction_6	18.3770388135726	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTTAACCTCTA	NA	False	NA	19	True	AATAAA	-14	NA	73752220	73768722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.14	chr13	+	8438	8	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	2307	-3	intron_retention	FALSE	canonical	3	263	junction_6	8.8132553229641	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTTTCTTAACCTCT	NA	False	NA	18	True	AATAAA	-13	NA	73754431	73768721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73761881_73762725_73764969_73765696_73765753_73765837_73765883_73766520
ES.9587.16	chr13	+	5534	6	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	-39	0	intron_retention	FALSE	canonical	3	263	junction_4	10.8	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	NA	False	NA	21	True	AATAAA	-16	NA	73760394	73768724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73761881_73762725_73762792_73763291_73764969_73765696_73765753_73765837_73765883_73766520
ES.9587.17	chr13	+	3254	8	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	9042	0	733	0	intron_retention	FALSE	canonical	3	263	junction_6	12.7551510203141	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	NA	False	NA	21	True	AATAAA	-16	NA	73761166	73768724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520
ES.9587.2	chr13	+	3893	15	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	-47	-2	intron_retention	FALSE	canonical	3	235	junction_7	19.9203772196068	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTTAACCTCTA	NA	False	NA	19	True	AATAAA	-14	NA	73752077	73768722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.3	chr13	+	6382	13	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	-42	0	intron_retention	FALSE	canonical	3	243	junction_2	17.4712064710928	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	NA	False	NA	21	True	AATAAA	-16	NA	73752082	73768724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73755988_73757022_73757102_73759262_73759381_73759740_73760598_73761776_73761881_73762725_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520
ES.9587.4	chr13	+	3680	16	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	-35	-3	intron_retention	FALSE	canonical	3	235	junction_6	20.4054458961872	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTTTCTTAACCTCT	NA	False	NA	18	True	AATAAA	-13	NA	73752089	73768721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.5	chr13	+	3032	16	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	36	51	intron_retention	FALSE	canonical	3	243	junction_2	17.0919084169479	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGTTAAACCTTTCTCAA	NA	False	NA	72	True	TATAAA	-24	NA	73752160	73768775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.6	chr13	+	2706	13	NNC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	43	1	intron_retention	FALSE	canonical	0	0	junction_3	79.5848603692939	215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATATTTTTCTTAACCT	NA	False	NA	16	True	AATAAA	-11	NA	73752167	73768719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73752519_73753048_73753150_73754340_73754531_73759749_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.7	chr13	+	2208	16	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	44	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	71.6058346474333	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATATTTTTCTTAACCT	NA	False	NA	16	True	AATAAA	-11	NA	73752168	73768719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9587.8	chr13	+	4267	15	NIC	ENSMUSG00000021610.9	novel	2340	17	NA	NA	56	-2	intron_retention	FALSE	canonical	3	243	junction_2	17.4281323129694	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTTAACCTCTA	NA	False	NA	19	True	AATAAA	-14	NA	73752180	73768722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73752519_73753048_73753150_73754340_73755988_73757022_73757102_73759262_73759381_73759740_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ES.9588.1	chr13	-	424	1	Intergenic	novelGene_8020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-27	NA	73769468	73769044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_73769000_73769500
ES.9589.1	chr13	+	4531	17	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	-22	-3	intron_retention	FALSE	canonical	0	0	junction_5	11.4712616459568	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	2101	False	NA	NA	False	AATAAA	-13	NA	73775007	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785328_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.10	chr13	+	4846	18	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.3167537178158	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTGTCATACTAATT	2125	False	NA	NA	False	AATAAA	-14	NA	73775031	73797960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73775758_73776266_73776794_73782270_73783336_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794697_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.11	chr13	+	4485	17	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	-2	-2	intron_retention	FALSE	canonical	0	0	junction_13	9.92924185172262	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTGTCATACTAATT	2126	False	NA	NA	False	AATAAA	-14	NA	73775032	73797960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794697_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.13	chr13	+	6790	16	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	3	2520	intron_retention	FALSE	canonical	2	3	junction_11	8.20731381147328	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTT	2131	False	NA	NA	False	NA	NA	NA	73775037	73800482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794339_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.14	chr13	+	5373	17	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	4	-3	intron_retention	FALSE	canonical	1	2	junction_13	10.9715541287458	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	2132	False	NA	NA	False	AATAAA	-13	NA	73775038	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73783336_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.15	chr13	+	5277	18	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	17	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	13.4640364236216	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	2145	False	NA	NA	False	AATAAA	-13	NA	73775051	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782275_73783336_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794339_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028_73797669_73797706
ES.9589.16	chr13	+	7888	15	NIC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	17	2520	intron_retention	FALSE	canonical	3	21	junction_2	5.40408009125078	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTT	2145	False	NA	NA	False	NA	NA	NA	73775051	73800482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73775368_73775469_73776794_73782270_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.17	chr13	+	5129	16	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	-35	0	intron_retention	FALSE	canonical	0	0	junction_9	10.8185026690388	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTCATACTAATTCG	2167	False	NA	NA	False	AATAAA	-16	NA	73775073	73797962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73783336_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790195_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.18	chr13	+	4141	14	NIC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	1248	-3	intron_retention	FALSE	canonical	3	21	junction_1	5.5533986608554	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	3471	False	NA	NA	False	AATAAA	-13	NA	73776377	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73776794_73782270_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.19	chr13	+	3128	15	NNC	ENSMUSG00000021611.10	novel	569	5	NA	NA	-1811	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	12.4337017326101	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	9916	False	NA	NA	False	AATAAA	-13	NA	73782822	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73783336_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794339_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.2	chr13	+	4296	16	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	-22	-5	intron_retention	FALSE	canonical	1	3	junction_14	8.48423374396428	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTGTCTGTCATACTA	2101	False	NA	NA	False	AATAAA	-11	NA	73775007	73797957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796445_73796536_73797028
ES.9589.20	chr13	+	2312	12	NIC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	-1052	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10.2610553160163	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	NA	False	NA	NA	False	AATAAA	-13	NA	73783581	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73783720_73784475_73784656_73785324_73785484_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.21	chr13	+	4975	12	ISM	ENSMUSG00000021611.10	ENSMUST00000223303.2	3730	17	9192	-2521	-333	2521	3prime_fragment	FALSE	canonical	3	24	junction_1	5.22232967867093	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTGTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	73784300	73800483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.22	chr13	+	5440	8	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	1166	2520	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	9.89537100602796	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	73789297	73800482	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.3	chr13	+	4340	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	-27	0	-22	0	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTCATACTAATTCG	2101	False	NA	NA	False	AATAAA	-16	NA	73775007	73797962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.4	chr13	+	7778	16	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	-11	2523	intron_retention	FALSE	canonical	1	2	junction_12	9.83101667625932	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTGTTTCTTTTT	2112	False	NA	NA	False	NA	NA	NA	73775018	73800485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.5	chr13	+	4179	15	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	-4	-3	intron_retention	FALSE	canonical	0	0	junction_7	12.1579737839252	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	2119	False	NA	NA	False	AATAAA	-13	NA	73775025	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73790094_73790195_73790483_73790556_73792367_73792557_73794339_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.6	chr13	+	4427	18	NNC	ENSMUSG00000021611.10	novel	3730	17	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.4747495831632	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTCTGTCATACTAATT	2124	False	NA	NA	False	AATAAA	-14	NA	73775030	73797960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73775758_73775880_73776794_73782270_73782467_73783538_73783757_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794524_73794723_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.7	chr13	+	7671	15	NIC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	1	2523	intron_retention	FALSE	canonical	0	0	junction_5	9.31752791949733	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTTTGTTTCTTTTT	2124	False	NA	NA	False	NA	NA	NA	73775030	73800485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785221_73785484_73787274_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.8	chr13	+	4263	16	NNC	ENSMUSG00000021611.10	novel	4313	16	NA	NA	1	-3	intron_retention	FALSE	canonical	0	0	junction_4	9.09065454189081	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTCTGTCATACTAAT	2124	False	NA	NA	False	AATAAA	-13	NA	73775030	73797959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783669_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.9589.9	chr13	+	6841	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	-4	-2524	1	2524	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTGTTTCTTTTTT	2124	False	NA	NA	False	NA	NA	NA	73775030	73800486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ES.959.1	chr1	+	181	1	ISM	ENSMUSG00000056055.14	ENSMUST00000130886.8	1886	9	21169	271	-1639	-271	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	87752570	87752751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87752600_87752800
ES.9590.1	chr13	+	178	1	Intergenic	novelGene_8021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAAGAGTTC	NA	False	NA	NA	False	NA	NA	NA	73863631	73863809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73863600_73863800
ES.9591.1	chr13	+	163	1	Intergenic	novelGene_8022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	73863836	73863999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73863800_73864000
ES.9592.1	chr13	+	5253	24	NIC	ENSMUSG00000017756.10	novel	1813	11	NA	NA	-60	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	159.651427960747	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTGCCTCATTTCCAT	NA	False	NA	105	True	AGTAAA	-30	NA	73881152	73964874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73881457_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.10	chr13	+	5017	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-40	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	159.678990359386	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911775	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957145_73958111_73958204_73961657_73961792_73962961
ES.9592.100	chr13	+	5738	1	Genic_Genomic	ENSMUSG00000017756.10	novel	NA	NA	NA	NA	-788	1658	mono-exon	FALSE	NA	NA	NA	NA	NA	1138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCAACTCGGGGCAGCAG	4222	False	NA	NA	False	AAAAAG	-5	NA	73960793	73966531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_73960800_73966500
ES.9592.12	chr13	+	4590	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-25	577	-25	-565	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCGTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	73911790	73964296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.13	chr13	+	5197	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	208.043460837447	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAATGTTTAAGGAACT	NA	False	NA	86	True	AGTAAA	-11	NA	73911792	73964855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73916566_73916617_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.14	chr13	+	3852	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-20	1310	-20	456	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGGCTTCTTTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	73911795	73963563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.15	chr13	+	5142	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	159.259819104181	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911800	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944900_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.16	chr13	+	4640	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-11	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208.704269774775	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911804	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932640_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961_73963328_73963816
ES.9592.17	chr13	+	4974	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_21	160.695235391987	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911804	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73961657_73961792_73962961
ES.9592.18	chr13	+	4999	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-7	-3	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	158.11464744146	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	NA	False	NA	101	True	AGTAAA	-26	NA	73911808	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.19	chr13	+	9449	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	2	4	intron_retention	FALSE	canonical	3	635	junction_9	55.456780878938	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGAACTTCGTGTGCCT	NA	False	NA	96	True	AGTAAA	-21	NA	73911817	73964865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.2	chr13	+	4608	24	NIC	ENSMUSG00000017756.10	novel	1813	11	NA	NA	2	-570	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	159.651427960747	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTGTATGGCGTATTTA	NA	False	NA	NA	False	NA	NA	NA	73881214	73964291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73881457_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.21	chr13	+	8066	20	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	-9	intron_retention	FALSE	canonical	3	635	junction_6	54.7237838674888	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911822	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73938900_73940668_73940911_73942042_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.22	chr13	+	5211	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.450853460203	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911822	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944788_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.23	chr13	+	3287	23	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	7	3018	-3	0	5prime_fragment	FALSE	canonical	3	635	junction_9	58.768789856156	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGACTCCTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	73911822	73961855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657
ES.9592.24	chr13	+	6157	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	0	intron_retention	FALSE	canonical	1	3	junction_8	212.367997475153	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911822	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73940996_73941057_73942042_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.26	chr13	+	5135	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	158.199880747209	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911822	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938121_73938774_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.27	chr13	+	3252	23	FSM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	-3	-7	-3	7	multi-exon	FALSE	canonical	1	1	junction_22	160.503604398136	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCATGACTGTTTTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	73911822	73960484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73960321
ES.9592.28	chr13	+	6097	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	0	intron_retention	FALSE	canonical	3	635	junction_8	58.669282514309	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911822	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.29	chr13	+	6235	22	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-2	-6	intron_retention	FALSE	canonical	3	635	junction_9	58.7661108319491	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	NA	False	NA	98	True	AGTAAA	-23	NA	73911823	73964867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.3	chr13	+	140	1	Intergenic	novelGene_8023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	73908728	73908868	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73908700_73908900
ES.9592.33	chr13	+	5352	18	NIC	ENSMUSG00000017756.10	novel	3242	23	NA	NA	-2	-1876	intron_retention	FALSE	canonical	3	635	junction_8	62.4159504057409	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGCGGTTTACTGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	73911823	73955428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73943385_73943722_73943822_73944885_73944944_73945645_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424
ES.9592.34	chr13	+	6195	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-1	-2	intron_retention	FALSE	canonical	3	635	junction_9	57.0237191478646	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911824	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.35	chr13	+	5241	24	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	159.107731808863	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911824	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943603_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.36	chr13	+	4300	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_24	156.326131452806	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911824	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961_73963502_73964313
ES.9592.38	chr13	+	5089	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	157.892368403289	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911826	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936835_73938084_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.4	chr13	+	159	1	Intergenic	novelGene_8024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAATATTAAA	NA	False	NA	NA	False	NA	NA	NA	73908902	73909061	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73908900_73909100
ES.9592.40	chr13	+	7638	20	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-2	intron_retention	FALSE	canonical	3	635	junction_9	59.2175668328803	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911826	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73946657_73947061_73947161_73947731_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.42	chr13	+	6290	23	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	11	11	1	1	intron_retention	FALSE	canonical	3	635	junction_9	58.768789856156	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911826	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657
ES.9592.44	chr13	+	5065	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	159.550971155597	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911826	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.45	chr13	+	5239	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	159.450853460203	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911826	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944777_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.47	chr13	+	4817	22	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	7	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	164.904149992677	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911832	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73961657_73961792_73962961
ES.9592.5	chr13	+	5776	23	NNC	ENSMUSG00000017756.10	novel	1504	4	NA	NA	-499	0	intron_retention	FALSE	canonical	0	0	junction_1	163.123970501169	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911316	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73911443_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.50	chr13	+	6261	22	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-5	0	intron_retention	FALSE	canonical	3	635	junction_9	58.3167906572572	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911836	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.51	chr13	+	5045	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	159.678990359386	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911837	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957173_73958060_73958204_73961657_73961792_73962961
ES.9592.53	chr13	+	5206	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	159.678990359386	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911837	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73957938_73958204_73961657_73961792_73962961
ES.9592.54	chr13	+	5343	22	ISM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	16	1	0	-1	intron_retention	FALSE	canonical	3	635	junction_9	56.9231888873645	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAAAGGGCCCATGACT	NA	False	NA	NA	False	ATTAAA	-11	NA	73911841	73960476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024
ES.9592.55	chr13	+	4970	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	159.121311213865	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911841	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942120_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.56	chr13	+	5088	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	159.567823696284	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911841	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946544_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.57	chr13	+	4827	22	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	166.86995765098	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAAGGAACTTCGTG	NA	False	NA	91	True	AGTAAA	-16	NA	73911841	73964860	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73947043_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.59	chr13	+	5173	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	208.744993286599	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911842	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73940996_73941057_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.6	chr13	+	5050	24	NNC	ENSMUSG00000017756.10	novel	1504	4	NA	NA	-478	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.651427960747	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	NA	False	NA	101	True	AGTAAA	-26	NA	73911337	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73911443_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.61	chr13	+	5103	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	213.447646790975	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	NA	False	NA	101	True	AGTAAA	-26	NA	73911842	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932640_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958030_73958204_73961657_73961792_73962961
ES.9592.62	chr13	+	4909	22	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	161.516368876241	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCGTGTGCCTCATT	NA	False	NA	100	True	AGTAAA	-25	NA	73911842	73964869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.63	chr13	+	5832	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	635	junction_9	59.1011354787371	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911842	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.64	chr13	+	5924	22	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	0	intron_retention	FALSE	canonical	3	635	junction_9	57.5378018302384	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911842	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.65	chr13	+	5760	24	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	2	-6	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	159.271225434533	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	NA	False	NA	98	True	AGTAAA	-23	NA	73911843	73964867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912662_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.66	chr13	+	2144	12	ISM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	18	14184	2	1230	5prime_fragment	FALSE	canonical	3	635	junction_9	62.4841136834789	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73911843	73946293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645
ES.9592.67	chr13	+	4896	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	2	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	162.462157068466	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	NA	False	NA	98	True	AGTAAA	-23	NA	73911843	73964867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.68	chr13	+	3009	21	ISM	ENSMUSG00000017756.10	ENSMUST00000222253.2	3242	23	18	3146	2	27	5prime_fragment	FALSE	canonical	3	635	junction_9	58.2016108024512	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTATGGCATTTGGCTT	NA	False	NA	NA	False	NA	NA	NA	73911843	73957331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103
ES.9592.69	chr13	+	5742	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	207.294660782397	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911845	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73950359_73951001_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.7	chr13	+	5211	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	-68	-1	-68	1	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTGCCTCATTTCCAT	NA	False	NA	105	True	AGTAAA	-30	NA	73911747	73964874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.70	chr13	+	5278	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	208.57572149515	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911845	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73942958_73943136_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.71	chr13	+	5100	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	159.450853460203	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	NA	False	NA	101	True	AGTAAA	-26	NA	73911848	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943816_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.73	chr13	+	10075	21	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-6	0	intron_retention	FALSE	canonical	3	635	junction_9	57.221914508342	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911851	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73961792_73962961
ES.9592.74	chr13	+	5130	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	159.40204902232	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911852	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947704_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.75	chr13	+	5706	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-3	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	157.761143663151	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	NA	False	NA	83	True	AGTAAA	-8	NA	73911854	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958828_73961657_73961792_73962961
ES.9592.76	chr13	+	5105	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	157.484538803632	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911858	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949224_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.77	chr13	+	6138	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_7	158.66286736991	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCGTGTGCCTCATT	NA	False	NA	100	True	AGTAAA	-25	NA	73911861	73964869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73940996_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.78	chr13	+	4441	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	5	410	intron_retention	FALSE	canonical	3	635	junction_9	57.6726477415478	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCACACAGTTCCTTG	NA	False	NA	NA	False	GATAAA	-13	NA	73911862	73963517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.79	chr13	+	5074	24	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	159.679558606207	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAAGGAACTT	NA	False	NA	87	True	AGTAAA	-12	NA	73911863	73964856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948613_73949053_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.8	chr13	+	5291	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-42	0	intron_retention	FALSE	canonical	3	635	junction_9	57.5489730361947	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911773	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.80	chr13	+	6802	21	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	7	-2	intron_retention	FALSE	canonical	1	1	junction_4	167.119149112243	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911864	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.81	chr13	+	5174	23	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	214.723443118802	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911871	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947577_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.83	chr13	+	5127	25	NNC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	207.294660782397	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73911880	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73950931_73950993_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.84	chr13	+	5353	26	NNC	ENSMUSG00000017756.10	novel	1433	7	NA	NA	407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	272.981130483409	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73912264	73964873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912426_73912533_73912662_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73957523_73957640_73958024_73958204_73961657_73961792_73962961
ES.9592.85	chr13	+	5003	24	NNC	ENSMUSG00000017756.10	novel	1433	7	NA	NA	557	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	159.651427960747	1151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73912414	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73912481_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.86	chr13	+	6431	1	Intergenic	novelGene_8025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	882	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGGCCCAGGATTCCCA	NA	False	NA	NA	False	NA	NA	NA	73922948	73929379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_73922900_73929400
ES.9592.87	chr13	+	4943	23	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	20821	6	-13094	-6	3prime_fragment	FALSE	canonical	3	635	junction_8	59.0199574034142	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	NA	False	NA	98	True	AGTAAA	-23	NA	73932636	73964867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.88	chr13	+	5555	21	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-12570	-5	intron_retention	FALSE	canonical	3	635	junction_7	61.2506938736207	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTTTAAGGAACTT	NA	False	NA	87	True	AGTAAA	-12	NA	73933160	73964856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.89	chr13	+	4718	21	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	24866	14	-9049	-2	3prime_fragment	FALSE	canonical	3	635	junction_6	58.793792189312	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTAAGGAACTTCGT	NA	False	NA	90	True	AGTAAA	-15	NA	73936681	73964859	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.9	chr13	+	5884	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-42	-2	intron_retention	FALSE	canonical	3	635	junction_9	57.6726477415478	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	NA	False	NA	102	True	AGTAAA	-27	NA	73911773	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.90	chr13	+	3203	21	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	24943	1452	-8972	314	3prime_fragment	FALSE	canonical	3	635	junction_6	58.793792189312	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTTGTGGCAGTTATA	NA	False	NA	NA	False	NA	NA	NA	73936758	73963421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.91	chr13	+	8033	19	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-7669	-2	intron_retention	FALSE	canonical	3	635	junction_5	53.5632774516088	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	222	False	NA	102	True	AGTAAA	-27	NA	73938061	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73961792_73962961
ES.9592.92	chr13	+	4529	19	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	26950	2	-6965	-2	3prime_fragment	FALSE	canonical	3	635	junction_4	54.8994591711426	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCGTGTGCCTCATTTC	631	False	NA	102	True	AGTAAA	-27	NA	73938765	73964871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.93	chr13	+	4660	15	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-2550	-9	intron_retention	FALSE	canonical	3	635	junction_1	57.4351897394634	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAATGTTTAAGGA	5046	False	NA	83	True	AGTAAA	-8	NA	73943180	73964852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.94	chr13	+	6389	9	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	-731	-6	intron_retention	FALSE	canonical	3	667	junction_1	54.1410195692693	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	937	False	NA	98	True	AGTAAA	-23	NA	73944999	73964867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73947852_73948503_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.95	chr13	+	5748	5	NNC	ENSMUSG00000017756.10	novel	6987	20	NA	NA	991	2	intron_retention	FALSE	canonical	0	0	junction_4	327.545798324448	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGGCCCATGACTGTT	2659	False	NA	NA	False	ATTAAA	-14	NA	73946721	73960479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73957938
ES.9592.96	chr13	+	3964	9	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	1366	-3	intron_retention	FALSE	canonical	3	667	junction_1	54.3139024560011	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	3034	False	NA	101	True	AGTAAA	-26	NA	73947096	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.97	chr13	+	1742	9	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	36687	1364	-557	402	3prime_fragment	FALSE	canonical	3	691	junction_1	50.082432049572	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCGTGAACAAGCACACA	4440	False	NA	NA	False	GATAAA	-5	NA	73948502	73963509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ES.9592.98	chr13	+	7155	4	ISM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	42425	11	1513	1	intron_retention	FALSE	canonical	3	707	junction_3	35.8267435801184	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGGAACTTCGTGTG	NA	False	NA	93	True	AGTAAA	-18	NA	73954240	73964862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_73954318_73954424_73954557_73957103_73957212_73958024
ES.9592.99	chr13	+	2175	5	NNC	ENSMUSG00000017756.10	novel	6987	20	NA	NA	-922	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	393.766031419674	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTCGTGTGCCTCATTT	531	False	NA	101	True	AGTAAA	-26	NA	73957102	73964870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_73957212_73958022_73958204_73961657_73961792_73962961_73964513_73964670
ES.9593.1	chr13	-	4277	9	NIC	ENSMUSG00000021567.16	novel	4016	10	NA	NA	-3	5	intron_retention	FALSE	canonical	2	3	junction_1	1.4790199457749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGATGACCCTTTCTTA	NA	False	NA	NA	False	AATAAA	-22	NA	73995753	73966647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995425_73995521
ES.9593.2	chr13	-	3995	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	21	0	1	0	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCGCCAAGATGACCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	73995729	73966652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
ES.9593.3	chr13	-	1952	10	FSM	ENSMUSG00000021567.16	ENSMUST00000022051.14	4016	10	19	2045	0	-885	multi-exon	FALSE	canonical	2	3	junction_1	1.49897084035912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTATGTTGTAAAGT	NA	False	NA	NA	False	AATAGA	-20	NA	73995731	73968697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995031_73995136_73995388_73995425_73995521
ES.9594.1	chr13	-	918	1	Intergenic	novelGene_8026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCCTGACCTTTCCCTG	8923	False	NA	NA	False	AATAAA	-13	NA	74053365	74052447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74052400_74053400
ES.9595.1	chr13	+	2609	17	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-21	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_14	60.9807538798103	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	False	NA	21	True	AATAAA	-18	NA	74085908	74109006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74104296_74104399_74105831_74106000_74108356
ES.9595.10	chr13	+	2801	15	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_5	57.4632535643787	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74085929	74108936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088910_74090066_74090278_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.11	chr13	+	2300	15	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	58.4949413476525	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTTTTGCTGAGTACC	NA	False	NA	11	True	TATAAA	-18	NA	74085929	74108928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74090066_74090278_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.12	chr13	+	3685	15	NNC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	1	-5	intron_retention	FALSE	canonical	1	1	junction_5	57.5496236623096	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTTTTGCTGAGTAC	NA	False	NA	10	True	TATAAA	-17	NA	74085930	74108927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088417_74088764_74088910_74090066_74090278_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.13	chr13	+	4983	14	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	3	-2	intron_retention	FALSE	canonical	3	136	junction_2	11.9960545782264	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACCCCGTCCGCTTTG	NA	False	NA	26	True	AATAAA	-23	NA	74085932	74109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.14	chr13	+	4412	14	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	5	-2	intron_retention	FALSE	canonical	0	0	junction_4	60.6624183006484	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	False	NA	21	True	AATAAA	-18	NA	74085934	74109006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74088417_74088764_74088910_74090062_74090715_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102665_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.15	chr13	+	3663	15	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-4	0	intron_retention	FALSE	canonical	3	18	junction_5	39.4704746278397	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085935	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.16	chr13	+	2969	15	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-4	-13	intron_retention	FALSE	canonical	3	136	junction_2	11.8831470441743	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTTCAATGTTTTG	NA	False	NA	2	True	TATAAA	-9	NA	74085935	74108919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.17	chr13	+	5795	12	NIC	ENSMUSG00000057649.7	novel	4569	13	NA	NA	-3	-2	intron_retention	FALSE	canonical	3	136	junction_2	12.0412514107625	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	False	NA	21	True	AATAAA	-18	NA	74085936	74109006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.18	chr13	+	7143	10	NIC	ENSMUSG00000057649.7	novel	4569	13	NA	NA	2	-14	intron_retention	FALSE	canonical	3	154	junction_3	7.64489662745314	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTTTCAATGTTTT	NA	False	NA	1	True	TATAAA	-8	NA	74085941	74108918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74090926_74092844_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.19	chr13	+	4621	13	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	3	-3	intron_retention	FALSE	canonical	3	136	junction_2	11.5602287559066	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTGATCACCCCGTCC	NA	False	NA	20	True	AATAAA	-17	NA	74085942	74109005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088910_74090062_74090926_74092844_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.2	chr13	+	287	2	ISM	ENSMUSG00000057649.7	ENSMUST00000222191.2	4569	13	-25	22247	-15	-581	5prime_fragment	FALSE	canonical	3	174	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAGAAGAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74085914	74086689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_74086065_74086552
ES.9595.20	chr13	+	4567	13	FSM	ENSMUSG00000057649.7	ENSMUST00000222191.2	4569	13	3	-1	3	1	multi-exon	FALSE	canonical	3	136	junction_2	11.6141675934562	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTACCTGTTTGTAT	NA	False	NA	20	True	TATAAA	-27	NA	74085942	74108937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74086065_74086552_74086768_74086983_74088910_74090062_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.21	chr13	+	4605	15	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	5	-4	intron_retention	FALSE	canonical	0	0	junction_7	53.6112708984495	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTTTTGCTGAGTACC	NA	False	NA	11	True	TATAAA	-18	NA	74085944	74108928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74093723_74093974_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.22	chr13	+	3724	16	NNC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	-8	-1	intron_retention	FALSE	canonical	0	0	junction_7	72.9908365633812	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGCTGAGTACCTGT	NA	False	NA	14	True	TATAAA	-21	NA	74085948	74108931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74093046_74094202_74094279_74095797_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74104548_74104636_74105831_74106000_74108356
ES.9595.24	chr13	+	3914	14	FSM	ENSMUSG00000057649.7	ENSMUST00000220488.2	3893	14	-23	2	-4	-2	multi-exon	FALSE	canonical	3	92	junction_4	22.5797731132568	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTGCTGAGTACCTG	NA	False	NA	13	True	TATAAA	-20	NA	74085952	74108930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74086065_74086552_74086768_74086983_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.25	chr13	+	1922	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-3	488	-3	-164	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTTTTGTCTCATCCT	NA	False	NA	NA	False	NA	NA	NA	74085953	74108526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.28	chr13	+	3368	16	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-3	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	54.1218378599003	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTAACTCTGATCACCCCG	NA	False	NA	17	True	AATAAA	-14	NA	74085953	74109002	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74093723_74093974_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.29	chr13	+	5276	13	NIC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	-3	0	intron_retention	FALSE	canonical	3	92	junction_4	22.1277854492692	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085953	74109014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74087117_74088355_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.3	chr13	+	4052	14	NNC	ENSMUSG00000057649.7	novel	3893	14	NA	NA	-12	0	intron_retention	FALSE	canonical	1	3	junction_4	44.7589203036173	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGCTGAGTACCTGTT	NA	False	NA	15	True	TATAAA	-22	NA	74085917	74108932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088910_74090062_74090278_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.30	chr13	+	3815	14	NIC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	0	-11	intron_retention	FALSE	canonical	3	92	junction_4	22.5928721021141	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTCAATGTTTTGCT	NA	False	NA	4	True	TATAAA	-11	NA	74085956	74108921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.31	chr13	+	4167	15	NNC	ENSMUSG00000057649.7	novel	3893	14	NA	NA	16	0	intron_retention	FALSE	canonical	0	0	junction_4	59.7150119573062	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085991	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088910_74089026_74089236_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.34	chr13	+	2355	16	NNC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.6880545808634	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74086003	74108936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086479_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.36	chr13	+	4912	14	NNC	ENSMUSG00000057649.7	novel	3893	14	NA	NA	28	-2	intron_retention	FALSE	canonical	0	0	junction_6	48.2246959739006	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	False	NA	21	True	AATAAA	-18	NA	74086003	74109006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74088910_74090062_74090174_74090809_74090926_74092844_74093723_74093974_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.37	chr13	+	3112	16	NNC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	28	-11	intron_retention	FALSE	canonical	0	0	junction_6	56.6837621271638	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTCAATGTTTTGCT	NA	False	NA	4	True	TATAAA	-11	NA	74086003	74108921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74089026_74089236_74090062_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.38	chr13	+	2248	16	NNC	ENSMUSG00000057649.7	novel	1111	11	NA	NA	-52	5	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	42.9359212470553	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCTGTTTGTATTTAT	NA	False	NA	24	True	TATAAA	-31	NA	74086158	74108941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086181_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.39	chr13	+	2662	15	ISM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	230	3	-24	-2	3prime_fragment	FALSE	canonical	3	92	junction_5	21.6998307150361	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACCCCGTCCGCTTTG	NA	False	NA	26	True	AATAAA	-23	NA	74086186	74109011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.41	chr13	+	2502	16	NIC	ENSMUSG00000057649.7	novel	1111	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	48.9185263701005	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74086210	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086355_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.42	chr13	+	3767	13	NNC	ENSMUSG00000057649.7	novel	3893	14	NA	NA	-76	-1	intron_retention	FALSE	canonical	1	2	junction_8	48.6746568783204	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACCCCGTCCGCTTTGA	NA	False	NA	27	True	AATAAA	-24	NA	74086680	74109012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086768_74086983_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099641_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.43	chr13	+	4646	12	NNC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	225	-2	intron_retention	FALSE	canonical	1	1	junction_3	48.4957184784781	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	False	NA	21	True	AATAAA	-18	NA	74086981	74109006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74088417_74088764_74088910_74090062_74090278_74090809_74090926_74092844_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.44	chr13	+	4417	11	NIC	ENSMUSG00000057649.7	novel	4569	13	NA	NA	789	0	intron_retention	FALSE	canonical	3	32	junction_2	41.337150361388	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74087545	74108936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.45	chr13	+	4422	9	FSM	ENSMUSG00000057649.7	ENSMUST00000223446.2	2342	9	-2152	72	1028	0	multi-exon	FALSE	canonical	3	154	junction_2	8.20727573558973	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74089862	74108936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.46	chr13	+	3105	10	NNC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	1256	0	intron_retention	FALSE	canonical	0	0	junction_1	53.7959106252511	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74090090	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74090278_74090749_74090926_74092844_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.5	chr13	+	7690	11	NNC	ENSMUSG00000057649.7	novel	4569	13	NA	NA	-10	-3	intron_retention	FALSE	canonical	0	0	junction_3	51.1293457810678	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTTTTGCTGAGTACCT	NA	False	NA	12	True	TATAAA	-19	NA	74085919	74108929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74086065_74086552_74088910_74090062_74093723_74093974_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.6	chr13	+	6967	11	NIC	ENSMUSG00000057649.7	novel	4569	13	NA	NA	-10	0	intron_retention	FALSE	canonical	3	136	junction_2	12.5155902777296	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTACCTGTTTGTA	NA	False	NA	19	True	TATAAA	-26	NA	74085919	74108936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74090926_74092844_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.7	chr13	+	2494	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085928	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9595.8	chr13	+	2434	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	-28	1	-1	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085928	74109013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ES.9596.1	chr13	-	9002	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	74	-5677	74	5677	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATATGAAAATTCTTCGG	NA	False	NA	NA	False	NA	NA	NA	74085829	74053788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.10	chr13	-	3442	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	435	junction_5	24.2967195010437	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085911	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.11	chr13	-	2419	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	217.684197226676	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085822	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061675_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078338_74080976_74081107_74084230_74084392_74085608
ES.9596.12	chr13	-	2184	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	43	-2	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	190.758338747361	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085860	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291_74069356_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.13	chr13	-	2302	14	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	180.799277371965	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085822	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74062677_74063242_74063340_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.14	chr13	-	4233	11	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	101	-2	intron_retention	FALSE	canonical	3	435	junction_4	24.7064768836028	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085802	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.16	chr13	-	4083	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	-122	-2	intron_retention	FALSE	canonical	3	435	junction_6	23.9927675052709	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74086025	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.17	chr13	-	3152	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	34	-2	intron_retention	FALSE	canonical	3	435	junction_5	23.6772373863154	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085869	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.18	chr13	-	2930	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	139.072797683643	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085884	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74063340_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.19	chr13	-	2201	13	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	99	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	137.026431959515	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74085804	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.2	chr13	-	2672	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	87	640	87	471	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAACAAGAATGCTATATA	NA	False	NA	NA	False	AAAACA	-3	NA	74085816	74060105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.20	chr13	-	3062	7	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	14961	1113	-1609	-2	3prime_fragment	FALSE	canonical	3	435	junction_6	30.916105116194	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCTTATTTTTATTCT	NA	False	NA	-22	True	ATTAAA	-12	NA	74070942	74060578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291
ES.9596.21	chr13	-	4351	11	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	-5	-4	intron_retention	FALSE	canonical	3	12	junction_4	149.238868931656	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCTCTTATTTTTATT	NA	False	NA	-24	True	ATTAAA	-10	NA	74085908	74060580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.22	chr13	-	2320	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	86	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.090719614906	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCTCTTATTTTTATT	NA	False	NA	-24	True	ATTAAA	-10	NA	74085817	74060580	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078457_74080976_74081107_74084225_74084392_74085608
ES.9596.23	chr13	-	7090	3	NIC	ENSMUSG00000021569.11	novel	1469	7	NA	NA	-2079	-6	intron_retention	FALSE	canonical	3	480	junction_1	14	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATTCTCTTATTTTTA	NA	False	NA	-26	True	ATTAAA	-8	NA	74071412	74060582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74062677_74063576_74063690_74066529
ES.9596.24	chr13	-	2205	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	19	-51	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	140.436422942515	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGCCTTTGTCACAGA	NA	False	NA	-71	True	AATACA	-12	NA	74085884	74060627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74062677_74063589_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.25	chr13	-	4010	10	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	110	-52	intron_retention	FALSE	canonical	3	489	junction_8	9.28559218478941	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGCCTTTGTCACAG	NA	False	NA	-72	True	AATACA	-11	NA	74085793	74060628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74063690_74066529_74066684_74068113_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.27	chr13	-	2142	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	18	1239	18	-128	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCATGTTTTATGTCAT	NA	False	NA	4	True	TATAAA	-29	NA	74085885	74060704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.28	chr13	-	1883	14	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	36	-466	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	180.799277371965	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGGGGATGCTAACTA	NA	False	NA	NA	False	AATAAA	-25	NA	74085867	74061042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74062677_74063242_74063340_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.3	chr13	-	2513	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	-207	1093	-207	18	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTGCTTCAAGTGCTG	NA	False	NA	-2	True	ATTAAA	-32	NA	74086110	74060558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.30	chr13	-	1752	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	54	1593	54	-482	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGCTGTCATAGAACA	NA	False	NA	NA	False	AATAAA	-9	NA	74085849	74061058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.31	chr13	-	2344	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	46	22831	46	-4474	5prime_fragment	FALSE	canonical	3	514	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTAAAAATTAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	74085857	74082296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74084392_74085608
ES.9596.4	chr13	-	2945	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	99	18	intron_retention	FALSE	canonical	3	480	junction_2	13.5737958539348	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCTGCTTCAAGTGCTG	NA	False	NA	-2	True	ATTAAA	-32	NA	74085804	74060558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.5	chr13	-	2327	13	NNC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	63	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	187.186775411323	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGCTTCAAGTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	74085840	74060559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081178_74084225_74084392_74085608
ES.9596.6	chr13	-	5042	12	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	103	17	intron_retention	FALSE	canonical	3	435	junction_5	24.3327483985698	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGCTTCAAGTGCT	NA	False	NA	-3	True	ATTAAA	-31	NA	74085800	74060559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74062677_74063576_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.7	chr13	-	3898	11	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	28	0	intron_retention	FALSE	canonical	3	489	junction_9	11.4407167607629	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085875	74060576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74061459_74062606_74063690_74066529_74066684_74068113_74068221_74068466_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.8	chr13	-	4158	11	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	16	0	intron_retention	FALSE	canonical	3	480	junction_1	14.1901374200534	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085887	74060576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ES.9596.9	chr13	-	5089	5	ISM	ENSMUSG00000021569.11	ENSMUST00000222156.2	1469	7	-2650	0	-2650	0	intron_retention	FALSE	canonical	3	480	junction_2	13.1244047484067	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74071983	74060576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113
ES.9597.1	chr13	+	3197	4	FSM	ENSMUSG00000021573.16	ENSMUST00000022057.9	5090	4	37	1856	37	-1856	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAACTTTGCTGCACAA	NA	False	NA	NA	False	NA	NA	NA	74157574	74182016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74157629_74169257_74169570_74178868_74179023_74179339
ES.9598.1	chr13	-	3879	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	27	-265	-11	265	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTTTGCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	74210391	74184353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.10	chr13	-	4587	10	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	1	intron_retention	FALSE	canonical	3	100	junction_6	15.7550697307953	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTCACTCTTTTTGC	NA	False	NA	2	True	NA	NA	NA	74210420	74185749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.11	chr13	-	4215	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	17	1	intron_retention	FALSE	canonical	3	27	junction_4	30.0348131340949	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTCACTCTTTTTGC	NA	False	NA	2	True	NA	NA	NA	74210401	74185749	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.12	chr13	-	4943	8	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2324	0	intron_retention	FALSE	canonical	3	100	junction_6	6.02037357305871	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	2146	False	NA	1	True	NA	NA	NA	74206544	74185750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420
ES.9598.13	chr13	-	2252	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGTTCACTCTTTTT	NA	False	NA	0	True	NA	NA	NA	74210402	74185751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.14	chr13	-	2360	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGTTCACTCTTTTT	NA	False	NA	0	True	NA	NA	NA	74210447	74185751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.15	chr13	-	2552	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-46	1135	-46	-2	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTCTGGTTCACTCTTT	NA	False	NA	-2	True	NA	NA	NA	74210464	74185753	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.17	chr13	-	3989	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-3	intron_retention	FALSE	canonical	3	39	junction_4	26.9386339668514	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTTCTGGTTCACTCTT	NA	False	NA	-3	True	NA	NA	NA	74210420	74185754	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.18	chr13	-	5795	9	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	17	-30	intron_retention	FALSE	canonical	3	100	junction_5	16.1936523057648	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAATAAACAAACAAA	NA	False	NA	-30	True	NA	NA	NA	74210401	74185781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.19	chr13	-	3505	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-2	-30	intron_retention	FALSE	canonical	3	100	junction_7	14.9946657181812	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAATAAACAAACAAA	NA	False	NA	-30	True	NA	NA	NA	74210420	74185781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.2	chr13	-	3449	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTTTTTAGATTGAAT	NA	False	NA	NA	False	NA	NA	NA	74210399	74184614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.21	chr13	-	2173	11	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	-30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0794853564235	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAATAAACAAACAAA	NA	False	NA	-30	True	NA	NA	NA	74210402	74185781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.23	chr13	-	2157	11	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-7	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	45.0794853564235	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGTGACAAATGTTTTAA	NA	False	NA	-79	True	AATAAA	-14	NA	74210425	74185830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186454_74191620_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.24	chr13	-	2101	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-11	-131	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTAAGTGGCTCTT	NA	False	NA	NA	False	AATATA	-19	NA	74210391	74185954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.25	chr13	-	3992	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-10	-138	intron_retention	FALSE	canonical	3	27	junction_4	30.0348131340949	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAACTTTTTAAGT	NA	False	NA	NA	False	AATATA	-12	NA	74210390	74185961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.26	chr13	-	1961	11	ISM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-2	3404	-2	-2199	5prime_fragment	FALSE	canonical	3	27	junction_4	30.0348131340949	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGAGATATGATGAT	NA	False	NA	NA	False	AATGAA	-13	NA	74210420	74188022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.27	chr13	-	1414	7	ISM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	-31	13414	-31	2983	5prime_fragment	FALSE	canonical	3	100	junction_3	17.8481247069701	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTCTTAATGCTT	NA	False	NA	NA	False	AATGAA	-11	NA	74210449	74198032	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.28	chr13	-	178	1	Intergenic	novelGene_8027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	74208757	74208579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74208600_74208800
ES.9598.3	chr13	-	3388	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	3	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGTTTTTAGATTGAA	NA	False	NA	NA	False	NA	NA	NA	74210402	74184615	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.4	chr13	-	5104	11	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	-3	intron_retention	FALSE	canonical	3	39	junction_4	26.9386339668514	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCGTGGCTGTTTTTAG	NA	False	NA	NA	False	NA	NA	NA	74210402	74184621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.5	chr13	-	6057	10	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	17	-314	intron_retention	FALSE	canonical	3	100	junction_6	15.2897932549063	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTAGTTGAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	74210401	74184932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.6	chr13	-	3123	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-11	-314	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTAGTTGAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	74210391	74184932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.7	chr13	-	3090	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-3	-314	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGTAGTTGAGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	74210421	74184932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.8	chr13	-	4401	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	16	-316	intron_retention	FALSE	canonical	0	0	junction_3	48.3214101375979	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACGTAGTTGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	74210402	74184934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74194816_74194890_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9598.9	chr13	-	4841	11	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	-11	-318	intron_retention	FALSE	canonical	3	19	junction_4	32.157269784607	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGACGTAGTTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	74210391	74184936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ES.9599.1	chr13	-	6159	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	16	307	16	-307	intron_retention	FALSE	canonical	3	205	junction_10	31.3753601276622	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGCCTTGTACTGTCC	7189	False	NA	0	True	AATAAA	-23	NA	74356812	74317913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ES.9599.10	chr13	-	3345	13	NNC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	40	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	89.993518285115	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7213	False	NA	-4	True	ATTAAA	-18	NA	74356788	74320110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74320496_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.11	chr13	-	3222	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	31	7	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGTGTGATGTCAG	7204	False	NA	-4	True	ATTAAA	-18	NA	74356797	74320110	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.13	chr13	-	2268	12	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	21	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	76.2541422801151	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTGGTGTGATGTCA	7194	False	NA	-5	True	ATTAAA	-17	NA	74356807	74320111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.9599.14	chr13	-	3341	14	NNC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	24	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	104.67458732075	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTGGTGTGATGTCA	7197	False	NA	-5	True	ATTAAA	-17	NA	74356804	74320111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74352485_74352599_74355025_74355217_74355941
ES.9599.15	chr13	-	3769	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	207	2506	207	5	3prime_fragment	FALSE	canonical	3	205	junction_10	31.3753601276622	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCTTGGTGTGATGTC	7380	False	NA	-6	True	ATTAAA	-16	NA	74356621	74320112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ES.9599.16	chr13	-	2460	14	NNC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.404474225432	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCTTGGTGTGATGTC	7173	False	NA	-6	True	ATTAAA	-16	NA	74356828	74320112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74320364_74321414_74321543_74322105_74322266_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355664_74355711_74356776
ES.9599.18	chr13	-	5493	12	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	43	5	intron_retention	FALSE	canonical	3	44	junction_11	68.3903477796501	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCTTGGTGTGATGTC	7216	False	NA	-6	True	ATTAAA	-16	NA	74356785	74320112	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.19	chr13	-	4348	11	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	6857	2508	5241	3	3prime_fragment	FALSE	canonical	3	205	junction_10	31.7238080942374	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGTGCTTGGTGTGATG	255	False	NA	-8	True	ATTAAA	-14	NA	74349971	74320114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574
ES.9599.2	chr13	-	4606	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	8	308	8	-308	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTGCCTTGTACTGTC	7181	False	NA	-1	True	AATAAA	-22	NA	74356820	74317914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.9599.20	chr13	-	3076	12	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	43	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	90.8134951925699	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGGTGCTTGGTGTGA	7216	False	NA	-10	True	ATTAAA	-12	NA	74356785	74320116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.3	chr13	-	4721	13	NNC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	21	-312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.6844692713696	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGCTCTGCCTTGTAC	7194	False	NA	-5	True	AATAAA	-18	NA	74356807	74317918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74320496_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.9599.4	chr13	-	5409	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	34	-314	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTAGAGCTCTGCCTTGT	7207	False	NA	-7	True	AATAAA	-16	NA	74356794	74317920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.5	chr13	-	8280	10	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	43	-316	intron_retention	FALSE	canonical	0	0	junction_1	81.9387003636496	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTAGAGCTCTGCCTT	7216	False	NA	-9	True	AATAAA	-14	NA	74356785	74317922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ES.9599.6	chr13	-	2925	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	22	1975	22	536	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATTTCTTAGAGGGAC	7195	False	NA	NA	False	AAGAAA	-1	NA	74356806	74319581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.9599.7	chr13	-	3392	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	33	179	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCTTTTCATTCCTAG	7206	False	NA	NA	False	ATTAAA	-14	NA	74356795	74319938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
ES.9599.8	chr13	-	2573	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	6	2343	6	168	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGCCAGGAAGCTT	7179	False	NA	NA	False	ATTAAA	-3	NA	74356822	74319949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.9599.9	chr13	-	2413	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	7	2502	7	9	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTGTGATGTCAGTT	7180	False	NA	-2	True	ATTAAA	-20	NA	74356821	74320108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ES.96.1	chr1	+	3477	6	NIC	ENSMUSG00000057715.14	novel	6451	7	NA	NA	-11	-1392	intron_retention	FALSE	canonical	2	7	junction_3	7.22218803410712	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTGTAAATGTGAATT	NA	False	NA	NA	False	AATAAA	-31	NA	11484317	11668825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_11484862_11582141_11582290_11588801_11588934_11633186_11633216_11658597_11658771_11666374
ES.96.10	chr1	+	3412	6	NIC	ENSMUSG00000057715.14	novel	6451	7	NA	NA	46	-1236	intron_retention	FALSE	canonical	2	7	junction_3	7.22218803410712	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGTTGTTAATAC	NA	False	NA	NA	False	AATAAA	-23	NA	11484538	11668981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_11484862_11582141_11582290_11588801_11588934_11633186_11633216_11658597_11658771_11666374
ES.96.11	chr1	+	3541	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	46	2864	46	-1236	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGTTGTTAATAC	NA	False	NA	NA	False	AATAAA	-23	NA	11484538	11668981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
ES.96.12	chr1	+	5096	1	FSM	ENSMUSG00000103825.2	ENSMUST00000194502.2	2471	1	-2592	-33	-2592	33	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCATCAAACCAACCAATC	NA	False	NA	NA	False	NA	NA	NA	11484549	11489645	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484500_11489600
ES.96.13	chr1	+	1401	8	FSM	ENSMUSG00000057715.14	ENSMUST00000171690.9	6158	8	228	4529	64	651	multi-exon	FALSE	canonical	3	8	junction_7	6.29868791001389	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCAATGCATTGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	11484556	11667506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374_11666542_11667188
ES.96.14	chr1	+	1522	8	ISM	ENSMUSG00000057715.14	ENSMUST00000137824.8	1880	14	181668	-408	16871	-96	3prime_fragment	FALSE	canonical	0	0	junction_1	1.49829835452879	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAATTTTCTTACA	NA	False	NA	NA	False	TATAAA	-18	NA	11666400	12046029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11666542_11818188_11818325_11868704_11868791_11900038_11900116_12003767_12003816_12021186_12021281_12042269_12042327_12045146
ES.96.15	chr1	+	404	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGTCTGAATATACAGT	NA	False	NA	NA	False	NA	NA	NA	11691261	11691665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_11691300_11691700
ES.96.16	chr1	+	2825	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	11823679	11826504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_11823700_11826500
ES.96.2	chr1	+	2537	12	NIC	ENSMUSG00000057715.14	novel	1832	13	NA	NA	1	-73	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	10.2715204439949	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTATGATGAAACT	NA	False	NA	NA	False	AATAAA	-14	NA	11484329	12046052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_11484862_11582141_11582290_11588801_11588934_11633186_11633216_11658597_11658771_11666374_11666542_11818188_11818325_11868704_11868791_11900038_11900116_12021186_12021281_12042269_12042327_12045146
ES.96.3	chr1	+	3106	8	FSM	ENSMUSG00000057715.14	ENSMUST00000171690.9	6158	8	1	3051	1	-1233	multi-exon	FALSE	canonical	3	8	junction_7	6.29868791001389	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGTTGTTAATACATG	NA	False	NA	NA	False	AATAAA	-26	NA	11484329	11668984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374_11666542_11667188
ES.96.4	chr1	+	6825	7	ISM	ENSMUSG00000057715.14	ENSMUST00000141512.8	1816	11	-2	331929	-2	0	5prime_fragment	FALSE	canonical	0	0	junction_6	9.12262145560267	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAACATTATGTTA	NA	False	NA	NA	False	AATAAA	-11	NA	11484333	11672035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658796_11666374
ES.96.5	chr1	+	3571	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	-152	3032	5	-1404	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATGGAAAAGTAATCTG	NA	False	NA	NA	False	AATAAA	-19	NA	11484340	11668813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
ES.96.6	chr1	+	2303	8	NNC	ENSMUSG00000057715.14	novel	6158	8	NA	NA	16	-1236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	8.58094709581783	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGTTGTTAATAC	NA	False	NA	NA	False	AATAAA	-23	NA	11484351	11668981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374_11666542_11667966
ES.96.7	chr1	+	4391	6	NNC	ENSMUSG00000057715.14	novel	6451	7	NA	NA	25	-22801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.85900603509299	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTTTTATTTTCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	11484360	11644054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11640602
ES.96.8	chr1	+	1467	7	NIC	ENSMUSG00000057715.14	novel	6158	8	NA	NA	26	651	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	7.80313327381308	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCAATGCATTGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	11484361	11667506	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_11484862_11582141_11582290_11588801_11588934_11633186_11633216_11658597_11658771_11666374_11666542_11667188
ES.96.9	chr1	+	6620	7	FSM	ENSMUSG00000057715.14	ENSMUST00000135014.8	6451	7	31	-200	31	10	multi-exon	FALSE	canonical	3	15	junction_4	4.57043640026736	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGTTATATGTATGTT	NA	False	NA	NA	False	AATAAA	-21	NA	11484523	11672045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_11484862_11582141_11582290_11588801_11588934_11615377_11615507_11633186_11633216_11658597_11658771_11666374
ES.960.1	chr1	-	205	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAGAAAGCAACCCAACA	NA	False	NA	NA	False	AAAAAG	-5	NA	87770353	87770148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87770100_87770400
ES.9600.1	chr13	-	4433	9	NNC	ENSMUSG00000021575.17	novel	2419	10	NA	NA	629	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTGTGAGATTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	74408162	74359237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74362785_74363490_74363630_74363861_74363924_74368659_74368857_74371019_74371154_74372883_74373014_74378006_74378097_74405590_74405689_74408126
ES.9600.2	chr13	-	169	1	Intergenic	novelGene_8028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAGAAAGCTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	74376619	74376450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74376400_74376600
ES.9601.1	chr13	-	2050	6	NNC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	23	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	311.752080987441	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGGTTTTTTGC	NA	False	NA	0	True	AATAAA	-24	NA	74465380	74451628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74452168_74453659_74453770_74457802_74457962_74458806_74459832_74464448_74464511_74465225
ES.9601.10	chr13	-	8382	3	NIC	ENSMUSG00000021576.7	novel	1262	4	NA	NA	-20	-6	intron_retention	FALSE	canonical	3	812	junction_1	14	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTTGCCTAGTTTTG	NA	False	NA	-13	True	AATAAA	-11	NA	74465355	74451641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74459832_74464448_74464511_74465225
ES.9601.11	chr13	-	4527	1	Genic_Genomic	ENSMUSG00000021576.7	novel	NA	NA	NA	NA	-2667	210	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCTGCTAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	74468366	74463839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_74463800_74468400
ES.9601.2	chr13	-	1153	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	-23	1	-23	-1	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGGTTTTTTGC	NA	False	NA	0	True	AATAAA	-24	NA	74465463	74451628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ES.9601.3	chr13	-	1105	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	278	-7	-18	-1	multi-exon	FALSE	canonical	3	148	junction_2	263.104085867172	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGGTTTTTTGC	NA	False	NA	0	True	AATAAA	-24	NA	74465421	74451628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
ES.9601.4	chr13	-	5130	5	NIC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	-10	1	intron_retention	FALSE	canonical	3	753	junction_1	31.4085975490788	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTAGTTTTGGCTGGTT	NA	False	NA	-6	True	AATAAA	-18	NA	74465413	74451634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74452168_74453659_74457962_74459786_74459832_74464448_74464511_74465225
ES.9601.6	chr13	-	1112	7	NNC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	23	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	362.674670561189	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTGCCTAGTTTTGGC	NA	False	NA	-11	True	AATAAA	-13	NA	74465380	74451639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74452168_74453072_74453126_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ES.9601.8	chr13	-	6277	4	NIC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	-2361	-6	intron_retention	FALSE	canonical	3	601	junction_2	88.8856943870422	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTTGCCTAGTTTTG	NA	False	NA	-13	True	AATAAA	-11	NA	74468060	74451641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74452168_74453659_74453770_74457802_74459832_74464448
ES.9601.9	chr13	-	6210	2	FSM	ENSMUSG00000021576.7	ENSMUST00000222993.2	625	2	-5386	-199	-5386	-6	multi-exon	FALSE	canonical	3	753	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTTGCCTAGTTTTG	3338	False	NA	-13	True	AATAAA	-11	NA	74459343	74451641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74452168_74453659
ES.9602.1	chr13	+	6006	4	Antisense	novelGene_ENSMUSG00000021577.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	74471312	74481767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74475478_74476415_74476534_74479416_74479592_74480219
ES.9602.2	chr13	+	7069	1	Antisense	novelGene_ENSMUSG00000021577.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAAGTCACAGAAGT	NA	False	NA	NA	False	NA	NA	NA	74474715	74481784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74474700_74481800
ES.9602.3	chr13	+	5955	2	Antisense	novelGene_ENSMUSG00000021577.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	74474874	74481767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74475478_74476415
ES.9602.4	chr13	+	5783	3	Antisense	novelGene_ENSMUSG00000021577.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAAGTCACAGAAGT	NA	False	NA	NA	False	NA	NA	NA	74474874	74481784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74475176_74475364_74475478_74476415
ES.9602.5	chr13	+	2272	5	Antisense	novelGene_ENSMUSG00000021577.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAAGTCACAGAAGT	NA	False	NA	NA	False	NA	NA	NA	74474874	74481784	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74475176_74475364_74475478_74476415_74476534_74479416_74479592_74480219
ES.9603.1	chr13	+	178	1	Intergenic	novelGene_8029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTTACTTTTAAG	572	False	NA	NA	False	NA	NA	NA	74494649	74494827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74494600_74494800
ES.9604.1	chr13	+	1468	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	-16	8107	-16	628	multi-exon	FALSE	canonical	3	416	junction_2	9.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGTTGCTTTTTTTTTT	4334	False	NA	30	True	TTTAAA	-5	NA	74498411	74505795	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.10	chr13	+	3558	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	27	5974	-8	-886	multi-exon	FALSE	canonical	3	416	junction_2	9.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAGTGTCTTCAGTA	4377	False	NA	NA	False	NA	NA	NA	74498454	74507928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.11	chr13	+	3267	2	FSM	ENSMUSG00000021578.18	ENSMUST00000223491.2	369	2	0	-2898	0	-1031	multi-exon	FALSE	canonical	3	10	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTGATGATTTGTTTC	4392	False	NA	6	True	AATAAA	-17	NA	74498469	74507783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74504574
ES.9604.12	chr13	+	4083	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	42	5434	0	-346	multi-exon	FALSE	canonical	3	416	junction_2	9.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCTCAGTGTCTATTT	4392	False	NA	NA	False	NA	NA	NA	74498469	74508468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.13	chr13	+	5724	4	FSM	ENSMUSG00000021578.18	ENSMUST00000160021.8	2682	4	36	-3078	2	-4	multi-exon	FALSE	canonical	3	9	junction_3	196.493143787654	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTTCTTTTTTTTTTT	4394	False	NA	NA	False	AATAAA	-15	NA	74498471	74513898	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574_74504937_74508723
ES.9604.14	chr13	+	2795	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	45	6719	3	-1631	multi-exon	FALSE	canonical	3	416	junction_2	9.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTCCTAATTCATT	4395	False	NA	NA	False	AAGAAA	-13	NA	74498472	74507183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.15	chr13	+	2350	5	NNC	ENSMUSG00000021578.18	novel	2682	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	210.631194270934	220	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACTGCATTGGCCTGGT	4397	False	NA	NA	False	NA	NA	NA	74498474	74510820	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74498528_74500974_74501106_74504574_74504937_74508723_74509321_74509613
ES.9604.16	chr13	+	1956	2	NNC	ENSMUSG00000021578.18	novel	9559	3	NA	NA	14413	994	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAATGAAATAGAAA	NA	False	NA	NA	False	NA	NA	NA	74512896	74514896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74514273_74514316
ES.9604.2	chr13	+	3409	3	NNC	ENSMUSG00000021578.18	novel	9559	3	NA	NA	-4	-1028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	208	216	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGATTTGTTTCTCA	4346	False	NA	9	True	AATAAA	-20	NA	74498423	74507786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74498490_74500974_74501106_74504574
ES.9604.3	chr13	+	1626	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	-2	7935	-2	800	multi-exon	FALSE	canonical	3	416	junction_2	9.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATTACTTTTTGTGTG	4348	False	NA	NA	False	NA	NA	NA	74498425	74505967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.4	chr13	+	8487	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	11	1061	3	-1061	multi-exon	FALSE	canonical	3	416	junction_2	9.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATATGTATTTCCAGTG	4361	False	NA	NA	False	NA	NA	NA	74498438	74512841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.5	chr13	+	3432	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	11	6116	3	-1028	multi-exon	FALSE	canonical	3	416	junction_2	9.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGATGATTTGTTTCTCA	4361	False	NA	9	True	AATAAA	-20	NA	74498438	74507786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.6	chr13	+	1189	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	13	8357	5	378	multi-exon	FALSE	canonical	3	416	junction_2	9.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGTTTTCTCAGTTT	4363	False	NA	NA	False	AATACA	-14	NA	74498440	74505545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.7	chr13	+	3819	3	NNC	ENSMUSG00000021578.18	novel	9559	3	NA	NA	13	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCATTGGCCTGGTGTG	4371	False	NA	NA	False	NA	NA	NA	74498448	74510823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74498528_74504574_74505906_74508414
ES.9604.8	chr13	+	6465	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	21	3073	13	9	multi-exon	FALSE	canonical	3	416	junction_2	9.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCCTGGTGTGGTCTGT	4371	False	NA	NA	False	NA	NA	NA	74498448	74510829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500974_74501106_74504574
ES.9604.9	chr13	+	1412	3	FSM	ENSMUSG00000021578.18	ENSMUST00000162376.2	762	3	-29	-621	-8	621	multi-exon	FALSE	canonical	1	3	junction_1	206.5	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAATGGTGTTGCTTT	4377	False	NA	23	True	NA	NA	NA	74498454	74505788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74498528_74500980_74501106_74504574
ES.9605.1	chr13	-	3541	2	FSM	ENSMUSG00000021577.15	ENSMUST00000161434.2	858	2	-1191	-1492	-1191	1014	multi-exon	FALSE	canonical	3	1968	junction_1	0	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAATAAAAGATTCC	NA	False	NA	NA	False	NA	NA	NA	74473566	74469358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959
ES.9605.11	chr13	-	2949	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	490.535218939892	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498329	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487954_74491455_74491618_74492969_74493057_74498264
ES.9605.12	chr13	-	2903	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	489.110270943943	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498357	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475000_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.13	chr13	-	6537	13	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-16	0	intron_retention	FALSE	canonical	3	1612	junction_9	163.750487700716	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498337	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.14	chr13	-	1834	9	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	609.545886295691	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498338	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480323_74492969_74493057_74498264
ES.9605.15	chr13	-	2919	16	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	633.342210464103	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498353	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74497083_74497149_74498264
ES.9605.16	chr13	-	1917	10	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	577.985411409725	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGGTCAAGGTGTTC	NA	False	NA	-9	True	NA	NA	NA	74498353	74470373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480336_74491561_74491618_74492969_74493057_74498264
ES.9605.17	chr13	-	2850	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-1	-1	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	494.161607045257	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGGTCAAGGTGTTC	NA	False	NA	-9	True	NA	NA	NA	74498359	74470373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475469_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.18	chr13	-	7082	12	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	10	-1	intron_retention	FALSE	canonical	3	1612	junction_8	167.35961182263	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGGTCAAGGTGTTC	NA	False	NA	-9	True	NA	NA	NA	74498344	74470373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.2	chr13	-	2996	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	31	-127	-10	127	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCACTGAAAATGACCCA	NA	False	NA	NA	False	AATAAA	-22	NA	74498368	74470245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.21	chr13	-	3566	14	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	14	-2	intron_retention	FALSE	canonical	3	1612	junction_10	160.614205713327	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGGTCAAGGTGTT	NA	False	NA	-10	True	NA	NA	NA	74498340	74470374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.23	chr13	-	2849	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	15	-8	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_2	486.701496750088	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGTTGCTTTTGGTCAA	NA	False	NA	-16	True	NA	NA	NA	74498339	74470380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472091_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.25	chr13	-	2372	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	30	498	-11	-20	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTATTGTTTTGTTCAT	NA	False	NA	0	True	AATATA	-27	NA	74498369	74470870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.26	chr13	-	2367	15	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	250	-30	combination_of_known_junctions	FALSE	canonical	1	3	junction_14	493.325719283034	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGCAGCACAAGTATTG	NA	False	NA	-10	True	AATATA	-17	NA	74498026	74470880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74497916
ES.9605.28	chr13	-	2335	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-2	-79	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	489.110270943943	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTATCTATTGGTCTGA	NA	False	NA	-9	True	AATAAA	-21	NA	74498360	74470929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472105_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.29	chr13	-	2272	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	14	-80	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	493.211839240855	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTATCTATTGGTCTG	NA	False	NA	-10	True	AATAAA	-20	NA	74498340	74470930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485520_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.3	chr13	-	2919	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	-18	-1	-18	1	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGTCAAGGTGTTCTA	NA	False	NA	-7	True	NA	NA	NA	74498417	74470371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.31	chr13	-	7082	12	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-15	-83	intron_retention	FALSE	canonical	3	1612	junction_8	118.264726163575	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTCTATCTATTGGT	NA	False	NA	-13	True	AATAAA	-17	NA	74498336	74470933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.33	chr13	-	2571	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	-84	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	490.77583311258	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTCTATCTATTGG	NA	False	NA	-14	True	AATAAA	-16	NA	74498357	74470934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491180_74491618_74492969_74493057_74498264
ES.9605.35	chr13	-	2170	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	10	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	493.211839240855	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTCTATCTATTGG	NA	False	NA	-14	True	AATAAA	-16	NA	74498344	74470934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482474_74485554_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.36	chr13	-	1480	10	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	13	-84	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	577.985411409725	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTCTATCTATTGG	NA	False	NA	-14	True	AATAAA	-16	NA	74498341	74470934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480377_74491466_74491618_74492969_74493057_74498264
ES.9605.37	chr13	-	2055	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	7	-84	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	490.936656831009	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTCTATCTATTGG	NA	False	NA	-14	True	AATAAA	-16	NA	74498347	74470934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479519_74480377_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.39	chr13	-	2292	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	-85	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	490.936656831009	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGTTCTATCTATTG	NA	False	NA	-15	True	AATAAA	-15	NA	74498357	74470935	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479581_74480211_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.40	chr13	-	4385	13	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	14	-86	intron_retention	FALSE	non_canonical	0	0	junction_6	527.707640807547	1095	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTAGTTCTATCTATT	NA	False	NA	-16	True	AATAAA	-14	NA	74498340	74470936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479530_74480283_74481310_74482416_74482542_74485509_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.42	chr13	-	5258	14	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	4	-87	intron_retention	FALSE	canonical	3	1480	junction_6	179.160633355597	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTAGTTCTATCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	74498350	74470937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.43	chr13	-	5992	13	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	1	-87	intron_retention	FALSE	canonical	3	1612	junction_9	163.750487700716	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTAGTTCTATCTAT	NA	False	NA	-17	True	AATAAA	-13	NA	74498357	74470937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.45	chr13	-	2250	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	42	608	1	-130	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGAGCAATCTTTTAT	NA	False	NA	-2	True	GATAAA	-25	NA	74498357	74470980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.46	chr13	-	2122	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	58	720	13	92	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTGATCAACAGCT	NA	False	NA	NA	False	NA	NA	NA	74498341	74471092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.47	chr13	-	2924	5	ISM	ENSMUSG00000021577.15	ENSMUST00000221594.2	722	6	-19	13690	15	726	5prime_fragment	FALSE	canonical	3	1612	junction_1	108.845073384145	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCCATATTTGTGCGGA	NA	False	NA	NA	False	NA	NA	NA	74498339	74484874	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.48	chr13	-	2354	5	ISM	ENSMUSG00000021577.15	ENSMUST00000221594.2	722	6	-37	14278	1	138	5prime_fragment	FALSE	canonical	3	1612	junction_1	108.845073384145	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGGGTGGGAGTGTTTG	NA	False	NA	NA	False	TATAAA	-14	NA	74498357	74485462	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.49	chr13	-	1318	5	ISM	ENSMUSG00000021577.15	ENSMUST00000160667.8	521	6	-57	919	-20	349	5prime_fragment	FALSE	canonical	3	1612	junction_1	108.845073384145	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATATTATTACTGAT	NA	False	NA	NA	False	NA	NA	NA	74498378	74486519	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.6	chr13	-	4703	13	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	-10	0	intron_retention	FALSE	canonical	3	1612	junction_9	121.259678880583	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498368	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.7	chr13	-	2839	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	494.158680001078	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498348	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487175_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9605.8	chr13	-	2819	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	490.936656831009	1099	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498344	74470372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480243_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ES.9606.1	chr13	-	3894	1	NIC	ENSMUSG00000021579.5	novel	2755	2	NA	NA	534	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTACAGTTTATTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	74511590	74507696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74507700_74511600
ES.9607.1	chr13	-	4116	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	-1	5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	13.7181449183189	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTTGTGTTTTCTC	NA	False	NA	1	True	NA	NA	NA	74538956	74517439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524639_74526730_74526986_74538782
ES.9607.10	chr13	-	2863	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	-27	826	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	13.7181449183189	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	74538982	74518718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524639_74526730_74526986_74538782
ES.9607.11	chr13	-	3714	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	35	577	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	15.3195136998535	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATAGCAGATTTTAC	NA	False	NA	NA	False	AATAAA	-22	NA	74538920	74518967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74525801_74526730_74526986_74538782
ES.9607.12	chr13	-	2535	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	28	1590	28	510	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCATTGTTGTATATTA	NA	False	NA	NA	False	AATAAA	-16	NA	74538927	74519034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ES.9607.13	chr13	-	2454	4	NIC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	13	510	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.6823829464998	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCATTGTTGTATATTA	NA	False	NA	NA	False	AATAAA	-16	NA	74538942	74519034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74520947_74524554_74524682_74526730_74526986_74538782
ES.9607.14	chr13	-	2502	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	13	505	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	13.7181449183189	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTATCATTGTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	74538942	74519039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524639_74526730_74526986_74538782
ES.9607.15	chr13	-	1952	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	-7	2208	-7	-108	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGTGTCAGATCCTT	NA	False	NA	NA	False	NA	NA	NA	74538962	74519652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ES.9607.16	chr13	-	168	1	Intergenic	novelGene_8030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATAGTCCACTTTT	NA	False	NA	NA	False	NA	NA	NA	74527368	74527200	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74527200_74527400
ES.9607.17	chr13	-	3347	1	Genic_Genomic	ENSMUSG00000069184.5	novel	NA	NA	NA	NA	-21	-16085	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTGCACTTTGCATC	NA	False	NA	NA	False	AATAAA	-15	NA	74538976	74535629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_74535600_74539000
ES.9607.2	chr13	-	4165	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	-7	-5	-7	5	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTTGTGTTTTCTC	NA	False	NA	1	True	NA	NA	NA	74538962	74517439	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ES.9607.3	chr13	-	4027	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	17.6263297370723	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCTTTTGGTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	74538926	74517444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526889_74538782
ES.9607.4	chr13	-	4156	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	97	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	18.4306131205666	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCTTTTGGTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	74538858	74517444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538682
ES.9607.5	chr13	-	3890	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	122	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	17.0202085768653	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCTTTTGGTTGTGT	NA	False	NA	-5	True	NA	NA	NA	74538833	74517445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524639_74526730_74526889_74538782
ES.9607.6	chr13	-	4987	4	NIC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	9	894	intron_retention	FALSE	canonical	3	29	junction_1	6.37704215656966	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCGAAGTAAAAAACATGC	NA	False	NA	NA	False	AATAAA	-21	NA	74538946	74518650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74520947_74523086_74523183_74524554_74526986_74538782
ES.9607.7	chr13	-	2896	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	33	1224	33	876	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTTCTAACCAACTT	NA	False	NA	NA	False	AATAAA	-3	NA	74538922	74518668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ES.9607.8	chr13	-	2817	4	NIC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	16	876	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.6823829464998	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTTCTAACCAACTT	NA	False	NA	NA	False	AATAAA	-3	NA	74538939	74518668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74520947_74524554_74524682_74526730_74526986_74538782
ES.9607.9	chr13	-	2839	5	NNC	ENSMUSG00000069184.5	novel	4153	5	NA	NA	14	876	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	18.4306131205666	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTTCTAACCAACTT	NA	False	NA	NA	False	AATAAA	-3	NA	74538941	74518668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526910_74538782
ES.9608.1	chr13	+	180	1	Intergenic	novelGene_8031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAACAG	6	True	NA	NA	False	NA	NA	NA	74546571	74546751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74546600_74546800
ES.9609.1	chr13	+	2826	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-46	4380	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	24.2532930181083	4882	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTTTATTAGATAT	1201	False	NA	5	True	NA	NA	NA	74547766	74559845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74547912_74553897_74554023_74554221_74554283_74557350
ES.9609.10	chr13	+	795	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-12	-29	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	7950	False	NA	NA	False	NA	NA	NA	74554515	74555436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74554972_74555097
ES.9609.11	chr13	+	881	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-11	-29	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAAACAAA	7951	False	NA	NA	False	NA	NA	NA	74554516	74555436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74554996_74555034
ES.9609.12	chr13	+	848	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-11	4	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGATAACTTT	7951	False	NA	NA	False	NA	NA	NA	74554516	74555469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74554994_74555098
ES.9609.13	chr13	+	869	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-9	-32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAAAAAACAAAAAAAC	7953	False	NA	NA	False	NA	NA	NA	74554518	74555433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74555229_74555274
ES.9609.14	chr13	+	3154	2	Intergenic	novelGene_8032	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTTACATATGTATTT	NA	False	NA	NA	False	TATAAA	-20	NA	74559134	74580341	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74561136_74579188
ES.9609.15	chr13	+	4177	1	Intergenic	novelGene_8033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGGGGTTTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	74559621	74563798	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74559600_74563800
ES.9609.2	chr13	+	2159	3	ISM	ENSMUSG00000062382.10_ENSMUSG00000076033.3	ENSMUST00000221435.2	491	4	-43	-1299	-43	648	intron_retention	FALSE	canonical	3	85	junction_2	7	4872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGTTTCATTTTTCTT	1204	False	NA	17	True	NA	NA	NA	74547769	74556113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_74547912_74553897_74554023_74554221
ES.9609.3	chr13	+	4061	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-42	5619	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	24.2532930181083	4882	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGATTCTCCACAGATA	1205	False	NA	NA	False	AATAAA	-15	NA	74547770	74561084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74547912_74553897_74554023_74554221_74554283_74557350
ES.9609.4	chr13	+	1518	3	ISM	ENSMUSG00000062382.10_ENSMUSG00000076033.3	ENSMUST00000221435.2	491	4	-37	-664	-37	13	intron_retention	FALSE	canonical	3	85	junction_2	7	4872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAACTTTATTTATTTG	1210	False	NA	NA	False	NA	NA	NA	74547775	74555478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_74547912_74553897_74554023_74554221
ES.9609.5	chr13	+	1390	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-35	12	intron_retention	FALSE	canonical	3	12	junction_1	0	4872	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATAACTTTATTTATTT	1212	False	NA	NA	False	NA	NA	NA	74547777	74555477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74547912_74554221
ES.9609.6	chr13	+	2196	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-21	5561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.6635217326557	4882	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGACTGTGACATGCAA	1226	False	NA	NA	False	ATTAAA	-23	NA	74547791	74561026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74547912_74554221_74554283_74557350_74557918_74559578
ES.9609.7	chr13	+	4026	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	-11	5622	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.7019051670398	4882	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTCTCCACAGATATCT	1236	False	NA	NA	False	AATAAA	-18	NA	74547801	74561087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_74547912_74553904_74554023_74554221_74554283_74557350
ES.9609.8	chr13	+	3708	1	Genic_Genomic	ENSMUSG00000062382.10	novel	NA	NA	NA	NA	-11	-3305	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTGCCTTGAGTGTCAG	1236	False	NA	NA	False	NA	NA	NA	74547801	74551509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_74547800_74551500
ES.9609.9	chr13	+	656	2	Fusion	ENSMUSG00000062382.10_ENSMUSG00000076033.3	novel	491	4	NA	NA	-12	-32	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4869	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCAAAAAAAACAAAAAAAC	7950	False	NA	NA	False	NA	NA	NA	74554515	74555433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_74554830_74555091
ES.961.1	chr1	+	5722	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-23	-4	-23	4	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCCTGTCCTCATTTCT	4047	False	NA	24	True	AATAAA	-28	NA	87780985	87872216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.10	chr1	+	5459	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-10	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_21	85.5695515247576	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4060	False	NA	19	True	AATAAA	-23	NA	87780998	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.11	chr1	+	5908	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.2007042224417	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGCATTCCTGTCCTC	4060	False	NA	18	True	AATAAA	-22	NA	87780998	87872210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87843710_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.12	chr1	+	8394	27	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-10	0	intron_retention	FALSE	canonical	3	256	junction_20	38.5888853299226	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4060	False	NA	20	True	AATAAA	-24	NA	87780998	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898
ES.961.13	chr1	+	5784	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_21	67.1541078221137	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4061	False	NA	19	True	AATAAA	-23	NA	87780999	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87862978_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.14	chr1	+	5600	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	87.3752390437885	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4061	False	NA	19	True	AATAAA	-23	NA	87780999	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869233_87870104
ES.961.15	chr1	+	5763	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	85.2007042224417	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4061	False	NA	19	True	AATAAA	-23	NA	87780999	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87843565_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.16	chr1	+	5578	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_21	85.3683719451849	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4061	False	NA	20	True	AATAAA	-24	NA	87780999	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.17	chr1	+	733	4	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-9	29029	-9	-283	5prime_fragment	FALSE	canonical	3	363	junction_2	19.7033556081755	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTCCCTCTTTGTGTC	4061	False	NA	NA	False	ATTAAA	-21	NA	87780999	87843183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821
ES.961.18	chr1	+	5650	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	-1	intron_retention	FALSE	canonical	3	29	junction_27	65.851872682578	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4061	False	NA	19	True	AATAAA	-23	NA	87780999	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.19	chr1	+	6445	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-9	-3	intron_retention	FALSE	canonical	3	256	junction_20	37.6329446151661	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4061	False	NA	17	True	AATAAA	-21	NA	87780999	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.2	chr1	+	5796	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-17	0	intron_retention	FALSE	canonical	3	256	junction_20	36.8801146573985	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4053	False	NA	20	True	AATAAA	-24	NA	87780991	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.20	chr1	+	7065	27	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	-1	intron_retention	FALSE	canonical	3	256	junction_18	37.8542048972418	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4062	False	NA	19	True	AATAAA	-23	NA	87781000	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.21	chr1	+	5670	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.6990288039994	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4062	False	NA	17	True	AATAAA	-21	NA	87781000	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781149_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.22	chr1	+	2248	9	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	-2	intron_retention	FALSE	canonical	3	273	junction_8	39.3700393700591	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTCCTGTGTTCAT	4062	False	NA	NA	False	AATAAA	-13	NA	87781000	87849691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294
ES.961.23	chr1	+	5738	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	98.1003999283987	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4062	False	NA	20	True	AATAAA	-24	NA	87781000	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87849935_87850102_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.25	chr1	+	6475	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	1	intron_retention	FALSE	canonical	2	2	junction_21	67.1541078221137	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTATTCTGTTCT	4062	False	NA	7	True	AATAAA	-18	NA	87781000	87872903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87862978_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.26	chr1	+	5696	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	67.9526309097921	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4062	False	NA	19	True	AATAAA	-23	NA	87781000	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861833_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.27	chr1	+	5588	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-8	-1	combination_of_known_junctions	FALSE	canonical	2	3	junction_21	67.4020358652134	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4062	False	NA	19	True	AATAAA	-23	NA	87781000	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.28	chr1	+	3609	28	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-8	4039	-8	186	5prime_fragment	FALSE	canonical	3	256	junction_21	38.5730027766815	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACCTTGCTTGTTTTCTC	4062	False	NA	NA	False	NA	NA	NA	87781000	87868173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898
ES.961.29	chr1	+	1884	9	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-7	24991	-7	-2472	5prime_fragment	FALSE	canonical	3	274	junction_5	39.1309899568104	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAAGTTCAACTGC	4063	False	NA	NA	False	TATAAA	-10	NA	87781001	87847221	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280
ES.961.3	chr1	+	4275	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-15	1435	-15	-1435	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTTGAAAATGGCATGG	4055	False	NA	NA	False	TTTAAA	-20	NA	87780993	87870777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.30	chr1	+	7646	28	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-7	1	-7	-1	intron_retention	FALSE	canonical	3	256	junction_21	38.5730027766815	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4063	False	NA	19	True	AATAAA	-23	NA	87781001	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898
ES.961.31	chr1	+	5696	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-7	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	67.9659633638851	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCCTGTCCTCATTTCT	4063	False	NA	24	True	AATAAA	-28	NA	87781001	87872216	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851803_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.32	chr1	+	5826	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	98.64400496039	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4063	False	NA	20	True	AATAAA	-24	NA	87781001	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87842821_87842927_87843213_87843347_87843504_87843710_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.33	chr1	+	6309	33	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	106.264631345523	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4063	False	NA	20	True	AATAAA	-24	NA	87781001	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87835945_87836165_87836282_87836340_87836766_87837098_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.34	chr1	+	5380	27	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_19	97.1355805352352	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4064	False	NA	17	True	AATAAA	-21	NA	87781002	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.35	chr1	+	6249	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-6	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	86.5919950275644	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4064	False	NA	17	True	AATAAA	-21	NA	87781002	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87844198_87844528_87844655_87845613_87845717_87846280_87846409_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.36	chr1	+	6257	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	29	junction_28	64.6690554646801	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGTCTATTCTG	4064	False	NA	3	True	AATAAA	-14	NA	87781002	87872899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.37	chr1	+	5508	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	63.0144887208626	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4065	False	NA	20	True	AATAAA	-24	NA	87781003	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.38	chr1	+	5561	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	96.6954771751112	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4069	False	NA	17	True	AATAAA	-21	NA	87781007	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87842821_87842927_87843213_87843347_87843504_87843565_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.39	chr1	+	5771	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1	-1	intron_retention	FALSE	canonical	3	256	junction_20	38.2555851597955	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4071	False	NA	19	True	AATAAA	-23	NA	87781009	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.4	chr1	+	5578	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_28	64.6690554646801	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4056	False	NA	20	True	AATAAA	-24	NA	87780994	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.41	chr1	+	5558	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	85.5198091385969	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTCCTGTCCTCATTT	4071	False	NA	22	True	AATAAA	-26	NA	87781009	87872214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855526_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.42	chr1	+	5563	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_27	69.1665765100634	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4071	False	NA	19	True	AATAAA	-23	NA	87781009	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87869090_87869222_87870104
ES.961.43	chr1	+	5658	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	67.7780879291336	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4071	False	NA	19	True	AATAAA	-23	NA	87781009	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846409_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.46	chr1	+	6552	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	111.797341451197	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4073	False	NA	19	True	AATAAA	-23	NA	87781011	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87847875_87848070_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87862978_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.48	chr1	+	6756	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	3	intron_retention	FALSE	canonical	3	256	junction_21	38.2188081436139	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCCTGTCCTCATTTC	4074	False	NA	23	True	AATAAA	-27	NA	87781012	87872215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87869222_87870104
ES.961.49	chr1	+	5698	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_26	67.9591749870664	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATTCCTGTCCTCATT	4074	False	NA	21	True	AATAAA	-25	NA	87781012	87872213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866911_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.5	chr1	+	5697	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_27	65.4014948539556	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4056	False	NA	20	True	AATAAA	-24	NA	87780994	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.50	chr1	+	6105	31	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	1	combination_of_known_junctions	FALSE	canonical	1	1	junction_30	66.6745328692548	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTCTATTCTGTT	4074	False	NA	5	True	AATAAA	-16	NA	87781012	87872901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104_87872478_87872752
ES.961.51	chr1	+	5607	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	67.9663482515371	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4074	False	NA	17	True	AATAAA	-21	NA	87781012	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87867948_87869090_87869222_87870104
ES.961.52	chr1	+	4041	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	564	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	88.1645608842826	443	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCAGTGGTTGGCCTTG	4074	False	NA	NA	False	AGTAAA	-16	NA	87781012	87868551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87843571_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898
ES.961.53	chr1	+	6422	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	4	-1	intron_retention	FALSE	canonical	3	17	junction_26	66.3675122606948	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4074	False	NA	19	True	AATAAA	-23	NA	87781012	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.54	chr1	+	3856	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	7	1832	7	-1832	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTAGCTGCAGTCAT	4077	False	NA	NA	False	NA	NA	NA	87781015	87870380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.55	chr1	+	6270	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_9	68.9777674179093	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTATTCTGTTCT	4077	False	NA	7	True	AATAAA	-18	NA	87781015	87872903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.56	chr1	+	9031	25	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	7	1	intron_retention	FALSE	canonical	0	0	junction_8	93.3527881509468	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTATTCTGTTCT	4077	False	NA	7	True	AATAAA	-18	NA	87781015	87872903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87851793_87851934_87852201_87852287_87853415_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910
ES.961.57	chr1	+	6720	32	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	96.3808673549453	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4078	False	NA	19	True	AATAAA	-23	NA	87781016	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87835945_87836165_87836282_87837098_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.58	chr1	+	5589	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.28062370799	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTCCTGTCCTCATTTC	4078	False	NA	23	True	AATAAA	-27	NA	87781016	87872215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843258_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.59	chr1	+	6570	29	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	8	0	8	0	intron_retention	FALSE	canonical	3	256	junction_21	37.9374317065586	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4078	False	NA	20	True	AATAAA	-24	NA	87781016	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090
ES.961.6	chr1	+	5656	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-11	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	66.4494121549857	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4059	False	NA	19	True	AATAAA	-23	NA	87780997	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808152_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.60	chr1	+	5677	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	67.5910272735617	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4078	False	NA	17	True	AATAAA	-21	NA	87781016	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855413_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.61	chr1	+	5543	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_27	83.4594487870411	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4078	False	NA	19	True	AATAAA	-23	NA	87781016	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87870104
ES.961.62	chr1	+	5894	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	96.5811345737642	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4078	False	NA	20	True	AATAAA	-24	NA	87781016	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87835945_87836165_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
ES.961.63	chr1	+	5580	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	67.0279697177962	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGCATTCCTGTCCTC	4078	False	NA	18	True	AATAAA	-22	NA	87781016	87872210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.65	chr1	+	5809	29	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	44	-1	intron_retention	FALSE	canonical	2	2	junction_20	68.339152730469	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	4114	False	NA	19	True	AATAAA	-23	NA	87781052	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87862978_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.66	chr1	+	5393	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-69	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_27	62.3187742949878	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAGCATTCCTGTCCT	4148	False	NA	17	True	AATAAA	-21	NA	87808087	87872209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
ES.961.67	chr1	+	3465	28	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1427	-1836	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	85.2149062483412	453	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTTCCTAGCTGCAG	5644	False	NA	NA	False	NA	NA	NA	87809583	87870376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844533_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853877_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.68	chr1	+	3978	3	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-1428	-1	intron_retention	FALSE	canonical	3	313	junction_2	29	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTTCCTGTGTTCATT	8659	False	NA	NA	False	AATAAA	-14	NA	87844191	87849692	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87844655_87845613_87845717_87846280
ES.961.69	chr1	+	4989	24	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	63519	0	-1092	0	3prime_fragment	FALSE	canonical	3	256	junction_15	27.978049727253	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	8995	False	NA	20	True	AATAAA	-24	NA	87844527	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.7	chr1	+	5787	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	84.9736168204906	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4059	False	NA	20	True	AATAAA	-24	NA	87780997	87872212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87843504_87843586_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.70	chr1	+	6423	21	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	750	1	intron_retention	FALSE	canonical	3	256	junction_13	24.838679514016	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTATTCTGTTCT	NA	False	NA	7	True	AATAAA	-18	NA	87846369	87872903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87869222_87870104
ES.961.71	chr1	+	5760	14	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-5728	-2	intron_retention	FALSE	canonical	3	262	junction_2	22.5905148446587	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGCATTCCTGTCCTC	635	False	NA	18	True	AATAAA	-22	NA	87853975	87872210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87869222_87870104
ES.961.72	chr1	+	3179	4	ISM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	85908	-689	810	1	3prime_fragment	FALSE	canonical	3	284	junction_3	8.33999733546454	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTCTATTCTGTT	1813	False	NA	5	True	AATAAA	-16	NA	87866916	87872901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_+_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.73	chr1	+	3988	2	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	1234	-1	intron_retention	FALSE	canonical	3	284	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCATTCCTGTCCTCA	2237	False	NA	19	True	AATAAA	-23	NA	87867340	87872211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_87869222_87870104
ES.961.8	chr1	+	5803	31	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	-10	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.8791690756288	473	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGCATTCCTGTCCTC	4060	False	NA	18	True	AATAAA	-22	NA	87780998	87872210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_87781179_87807246_87807347_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.961.9	chr1	+	6394	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	-10	-689	-10	1	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTGTCTATTCTGTT	4060	False	NA	5	True	AATAAA	-16	NA	87780998	87872901	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ES.9610.1	chr13	+	228	1	Intergenic	novelGene_8036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAACAAACTGGG	NA	False	NA	NA	False	NA	NA	NA	74584737	74584965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74584700_74585000
ES.9611.1	chr13	+	4346	1	Intergenic	novelGene_8037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGGTTCTGAGGATAT	NA	False	NA	NA	False	NA	NA	NA	74636009	74640355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74636000_74640400
ES.9612.1	chr13	+	316	1	Intergenic	novelGene_8040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAGGTCCCATGGGG	NA	False	NA	NA	False	NA	NA	NA	74664293	74664609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74664300_74664600
ES.9612.2	chr13	+	4310	2	Antisense	novelGene_ENSMUSG00000113019.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGGGTTCTGAAGATAT	NA	False	NA	NA	False	NA	NA	NA	74664293	74668875	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74664592_74664863
ES.9613.1	chr13	+	792	1	FSM	ENSMUSG00000113660.2	ENSMUST00000222151.2	1058	1	400	-134	400	134	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	74682044	74682836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74682000_74682800
ES.9614.1	chr13	+	158	1	Antisense	novelGene_ENSMUSG00000113047.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	74706594	74706752	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74706600_74706800
ES.9615.1	chr13	+	179	1	Intergenic	novelGene_8042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATAGCAG	NA	False	NA	NA	False	NA	NA	NA	74709768	74709947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74709800_74709900
ES.9615.2	chr13	+	477	1	Intergenic	novelGene_8043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	74709768	74710245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74709800_74710200
ES.9616.1	chr13	-	1409	2	FSM	ENSMUSG00000113311.2	ENSMUST00000222047.2	661	2	33	-781	33	781	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAATATCTTTTTTTTT	9029	False	NA	NA	False	NA	NA	NA	74554823	74551520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74552604_74554497
ES.9617.1	chr13	-	252	2	Antisense	novelGene_ENSMUSG00000113212.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTTTTAGATATGTGG	NA	False	NA	NA	False	NA	NA	NA	74675086	74555738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_74555793_74674888
ES.9617.10	chr13	-	3101	3	NNC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	-1201	-374	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGATTCATCTTTAC	3211	False	NA	NA	False	NA	NA	NA	74588169	74584039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74584889_74585699_74585761_74585978
ES.9617.11	chr13	-	1175	4	NNC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	-5	-376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.0252236056942	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATCTGATTCATCTTT	6488	False	NA	NA	False	NA	NA	NA	74610819	74584041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74584910_74585699_74585761_74585978_74586106_74610700
ES.9617.12	chr13	-	3975	3	NNC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	-2056	-376	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATCTGATTCATCTTT	2356	False	NA	NA	False	NA	NA	NA	74589024	74584041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74584910_74585699_74585761_74585978
ES.9617.13	chr13	-	6162	1	Genic_Genomic	ENSMUSG00000112964.2	novel	NA	NA	NA	NA	-3240	-5526	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATCTTTTGTGGCTTTC	NA	False	NA	NA	False	NA	NA	NA	74595353	74589191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_74589200_74595400
ES.9617.14	chr13	-	7187	1	Genic_Genomic	ENSMUSG00000112964.2	novel	NA	NA	NA	NA	-4526	-5787	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGCTCTGCTGTATGT	NA	False	NA	NA	False	NA	NA	NA	74596639	74589452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_74589500_74596600
ES.9617.15	chr13	-	7377	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	28	-5791	2	5791	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATTGAGAAATCTGTC	6497	False	NA	NA	False	NA	NA	NA	74610810	74589599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.16	chr13	-	6975	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	31	-5392	1	5392	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCACGTGCCATTGTCT	6500	False	NA	NA	False	NA	NA	NA	74610807	74589998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.17	chr13	-	6779	4	Fusion	ENSMUSG00000112964.2_ENSMUSG00000113019.2	novel	1614	4	NA	NA	8	5203	multi-exon	FALSE	canonical	2	11	junction_3	14.9888847706114	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGGGTCTGGATTACTT	NA	False	NA	NA	False	NA	NA	NA	74670572	74590187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_74596679_74598074_74598136_74598354_74598482_74670472
ES.9617.18	chr13	-	5758	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	28	-4172	2	4172	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCATACTTGTTTTTCT	6497	False	NA	NA	False	NA	NA	NA	74610810	74591218	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.19	chr13	-	4003	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	0	-2389	0	2389	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	6469	False	NA	NA	False	ATTAAA	-21	NA	74610838	74593001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.2	chr13	-	3899	2	Intergenic	novelGene_8034	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	9090	False	NA	NA	False	ATTAAA	-17	NA	74582290	74560338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74561154_74579206
ES.9617.20	chr13	-	3434	4	NNC	ENSMUSG00000112964.2	novel	1614	4	NA	NA	-5	1862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	20.138409955991	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	6488	False	NA	NA	False	NA	NA	NA	74610819	74593528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74596679_74598074_74598136_74598354_74598482_74610723
ES.9617.21	chr13	-	3341	3	FSM	ENSMUSG00000112964.2	ENSMUST00000221334.2	1440	3	-16	-1885	8	1862	multi-exon	FALSE	canonical	2	12	junction_2	14	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	6477	False	NA	NA	False	NA	NA	NA	74610830	74593528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74610700
ES.9617.22	chr13	-	3477	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	-2	-1861	-2	1861	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	6467	False	NA	NA	False	NA	NA	NA	74610840	74593529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.23	chr13	-	1506	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	14	34637	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	29.8824363129916	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGAGTTGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	74642075	74593535	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74593543_74628189_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ES.9617.24	chr13	-	424	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	51	1139	21	-132	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTAGTCTCCAGTAT	6520	False	NA	NA	False	NA	NA	NA	74610787	74596529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ES.9617.25	chr13	-	6092	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	14	-4557	-8	4554	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTAGTGCTAAGTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	74642097	74623618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ES.9617.26	chr13	-	3499	3	NNC	ENSMUSG00000069208.10	novel	1406	4	NA	NA	13	4544	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	14.5	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTCTCATTTTTTCTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	74642076	74623628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74626982_74631024_74631063_74641968
ES.9617.27	chr13	-	5933	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	13	-4540	13	4540	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAACTTTCTCATTTTTT	NA	False	NA	NA	False	ATTAAA	-10	NA	74642076	74623632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ES.9617.29	chr13	-	3106	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	-24	-1676	-2	1676	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTGATCACTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	74642113	74626496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ES.9617.3	chr13	-	2129	1	Intergenic	novelGene_8035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGAACATGGTTTCCTG	9535	False	NA	NA	False	TATAAA	-20	NA	74581845	74579716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74579700_74581800
ES.9617.30	chr13	-	3323	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-203	1672	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	26.2022899762597	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTGCTGTGATCAC	NA	False	NA	NA	False	AATAAA	-17	NA	74642314	74626500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968_74642054_74642157
ES.9617.31	chr13	-	1908	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	21	-523	21	523	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	74642068	74627649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ES.9617.32	chr13	-	2062	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	13	-526	-9	523	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	74642098	74627649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ES.9617.34	chr13	-	1535	5	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.0281118287514	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74642080	74628176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632160_74641968
ES.9617.35	chr13	-	1486	5	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-166	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	25.7815340893439	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74642277	74628176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968_74642054_74642157
ES.9617.37	chr13	-	1651	6	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	-207	-1	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	26.2022899762597	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74642318	74628176	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968_74642054_74642157
ES.9617.38	chr13	-	1442	5	NNC	ENSMUSG00000069208.10	novel	1549	5	NA	NA	14	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	29.3459963197708	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTCGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	74642075	74628180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632076_74641968
ES.9617.39	chr13	-	656	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	14	736	14	-273	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTATGAGTGTGATCA	NA	False	NA	NA	False	NA	NA	NA	74642075	74628908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ES.9617.4	chr13	-	5666	3	FSM	ENSMUSG00000112964.2	ENSMUST00000222130.2	1321	3	-510	-3835	-510	3069	multi-exon	FALSE	canonical	3	11	junction_1	9.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGTGCATGGAAAATG	3902	False	NA	NA	False	NA	NA	NA	74587478	74579830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74583936_74585699_74585761_74585978
ES.9617.40	chr13	-	6073	1	NIC	ENSMUSG00000069208.10	novel	1406	4	NA	NA	9	-7372	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACACTAAGCTTCTATAC	NA	False	NA	NA	False	NA	NA	NA	74642080	74636007	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74636000_74642100
ES.9617.41	chr13	-	3779	2	Intergenic	novelGene_8038	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGCTGTGATCACTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74657191	74653245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74656996_74657162
ES.9617.42	chr13	-	5168	7	NNC	ENSMUSG00000113019.2	novel	395	4	NA	NA	-395	4467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.540999779765	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTGCTGTGATCAC	NA	False	NA	NA	False	AATAAA	-17	NA	74670975	74653249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74657816_74659212_74659274_74659474_74659602_74669804_74669898_74670472_74670559_74670660_74670790_74670869
ES.9617.43	chr13	-	4887	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-26	-4466	-26	4466	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCCTGCTGTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	74670606	74653250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
ES.9617.44	chr13	-	2130	1	Intergenic	novelGene_8039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAGACAGTTTCACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	74655490	74653360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74653400_74655500
ES.9617.45	chr13	-	3734	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-27	-3312	-27	3312	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCTGACTCTCCAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	74670607	74654404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
ES.9617.46	chr13	-	3367	6	NNC	ENSMUSG00000113019.2	novel	395	4	NA	NA	-364	2790	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	30.2628485110044	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGATGTCT	NA	False	NA	NA	False	NA	NA	NA	74670944	74654926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472_74670559_74670660_74670790_74670869
ES.9617.48	chr13	-	7246	3	ISM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	6809	-2789	6809	2789	3prime_fragment	FALSE	canonical	3	55	junction_1	14	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74663771	74654927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74657816_74659212_74659274_74659474
ES.9617.49	chr13	-	2892	5	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	-5	47100	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	26.8421310629391	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74711998	74654928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74655046_74700083_74702530_74703925_74703987_74704201_74704329_74711857
ES.9617.5	chr13	-	4570	4	FSM	ENSMUSG00000112964.2	ENSMUST00000223312.2	1573	4	331	-3328	331	3059	multi-exon	FALSE	canonical	0	0	junction_3	12.3917535302941	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAATTTCAAGTGC	NA	False	NA	NA	False	NA	NA	NA	74591782	74579840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74583936_74585699_74585761_74585978_74586106_74591495
ES.9617.50	chr13	-	5811	3	ISM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	7037	-1582	7037	1582	3prime_fragment	FALSE	canonical	3	55	junction_1	14	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	74663543	74656134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74657816_74659212_74659274_74659474
ES.9617.52	chr13	-	2172	6	NNC	ENSMUSG00000113019.2	novel	395	4	NA	NA	-363	1578	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.3215580710794	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATAACTGTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	74670943	74656138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472_74670577_74670660_74670790_74670869
ES.9617.53	chr13	-	481	4	FSM	ENSMUSG00000113019.2	ENSMUST00000220784.2	395	4	-34	-52	-34	52	multi-exon	FALSE	canonical	3	31	junction_3	21.249836600679	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGTACTCTCCAATATCA	NA	False	NA	NA	False	NA	NA	NA	74670614	74657664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74657816_74659212_74659274_74659474_74659602_74670472
ES.9617.54	chr13	-	185	1	Intergenic	novelGene_8041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAGATAATC	NA	False	NA	NA	False	NA	NA	NA	74675087	74674902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74674900_74675100
ES.9617.57	chr13	-	4723	6	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	62	3761	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	25.8874486962312	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCCTGCTGTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	74712313	74698267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712046_74712177_74712256
ES.9617.59	chr13	-	3452	4	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	-3	2584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.7354301526214	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	-1	True	ATTAAA	-19	NA	74711996	74699444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74702530_74703925_74703987_74704201_74704369_74711857
ES.9617.6	chr13	-	4265	3	NIC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	2	3058	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTAATTTCAAGTG	6497	False	NA	NA	False	NA	NA	NA	74610810	74579841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74583936_74585699_74585761_74610700
ES.9617.60	chr13	-	3679	5	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	8	2583	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	23.6682804614108	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	74712367	74699445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712046
ES.9617.62	chr13	-	3428	4	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	29	2583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	30.7354301526214	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	74711964	74699445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74702530_74703925_74703987_74704201_74704378_74711857
ES.9617.63	chr13	-	4369	3	FSM	ENSMUSG00000113047.2	ENSMUST00000221408.2	1428	3	-359	-2582	-359	2582	multi-exon	FALSE	canonical	3	49	junction_1	12.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCTGACTCTCCAGT	NA	False	NA	-3	True	ATTAAA	-17	NA	74705426	74699446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74702530_74703925_74703987_74704201
ES.9617.65	chr13	-	2886	4	NNC	ENSMUSG00000113047.2	novel	704	5	NA	NA	16	2059	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.7354301526214	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74711977	74699969	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74702530_74703925_74703987_74704201_74704347_74711857
ES.9617.67	chr13	-	2947	5	FSM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	4	-2247	4	2057	multi-exon	FALSE	canonical	3	16	junction_4	21.3658606192215	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74712371	74699971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712256
ES.9617.68	chr13	-	688	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	375	-46	-7	46	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAACCTTATGAGTGTG	NA	False	NA	NA	False	NA	NA	NA	74712000	74702172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
ES.9617.7	chr13	-	4782	3	FSM	ENSMUSG00000112964.2	ENSMUST00000222130.2	1321	3	-31	-3430	-31	2664	multi-exon	FALSE	canonical	3	11	junction_1	9.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGCTTGGTTATTTGA	4381	False	NA	NA	False	AATAAA	-14	NA	74586999	74580235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74583936_74585699_74585761_74585978
ES.9617.8	chr13	-	4355	1	Genic_Genomic	ENSMUSG00000112964.2	novel	NA	NA	NA	NA	1575	1861	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	5987	False	NA	NA	False	NA	NA	NA	74585393	74581038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_74581000_74585400
ES.9617.9	chr13	-	3226	5	NNC	ENSMUSG00000112964.2	novel	1332	4	NA	NA	2	1861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.8611761642765	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	6497	False	NA	NA	False	NA	NA	NA	74610810	74581038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74583936_74585699_74585761_74585978_74586106_74588783_74588838_74610723
ES.9618.1	chr13	+	3395	2	Antisense	novelGene_ENSMUSG00000113204.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGCAATTTTCACAGTAC	NA	False	NA	NA	False	NA	NA	NA	74753378	74758159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74755857_74757242
ES.9618.2	chr13	+	1306	1	Antisense	novelGene_ENSMUSG00000113204.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGCAATTTTCACAGTAC	NA	False	NA	NA	False	NA	NA	NA	74756853	74758159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74756900_74758200
ES.9619.1	chr13	+	6971	1	Antisense	novelGene_ENSMUSG00000113204.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTGCACATGGTTCC	NA	False	NA	NA	False	AATATA	-18	NA	74765582	74772553	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74765600_74772600
ES.962.1	chr1	+	2184	6	Antisense	novelGene_ENSMUSG00000005501.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTTTTCACTGTCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	87920922	87932480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_87922025_87923432_87923579_87925536_87925681_87927460_87927626_87930129_87930242_87931965
ES.9620.1	chr13	-	5643	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18407	4997	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGTGAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	74739746	74722479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
ES.9620.10	chr13	-	4354	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18654	3604	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	27.2	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	74739499	74723872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74731765_74731993_74739390
ES.9620.11	chr13	-	3537	5	NNC	ENSMUSG00000113204.2	novel	631	5	NA	NA	-26	3082	intron_retention	TRUE	non_canonical	0	0	junction_1	42.2285448482422	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	4800	False	NA	NA	False	NA	NA	NA	74765847	74724394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758446_74765320
ES.9620.12	chr13	-	1426	2	NNC	ENSMUSG00000113204.2	novel	1703	7	NA	NA	3690	3081	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGGTCATGATGTCTA	NA	False	NA	NA	False	NA	NA	NA	74754463	74724395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724631_74753272
ES.9620.13	chr13	-	3729	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18292	3080	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	33.7615165536147	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGTCATGATGTCT	NA	False	NA	NA	False	NA	NA	NA	74739861	74724396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74731765_74731993_74739787
ES.9620.14	chr13	-	3604	6	NNC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	28	3079	intron_retention	FALSE	non_canonical	0	0	junction_1	42.9948834165183	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	4854	False	NA	NA	False	NA	NA	NA	74765793	74724397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74765320
ES.9620.15	chr13	-	4381	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18256	3079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.8460567209174	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74739897	74724397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730495_74731765_74731993_74738722_74738816_74739390
ES.9620.17	chr13	-	3772	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18645	3079	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.3275452353137	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74739508	74724397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74731765_74731993_74739390
ES.9620.18	chr13	-	3176	5	NNC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-11	3079	intron_retention	FALSE	non_canonical	0	0	junction_1	47.0053188479772	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	5207	False	NA	NA	False	NA	NA	NA	74765440	74724397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758495_74765320
ES.9620.19	chr13	-	3279	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	-30	3079	intron_retention	TRUE	non_canonical	0	0	junction_1	23.2163735324878	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGATGTC	5188	False	NA	NA	False	NA	NA	NA	74765459	74724397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729360_74739390_74739491_74765420
ES.9620.2	chr13	-	4445	3	Intergenic	novelGene_8044	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGTGAGAGCAA	6871	False	NA	NA	False	NA	NA	NA	74727389	74722479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74723548_74723583_74725525_74725953
ES.9620.20	chr13	-	3737	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18394	3078	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739759	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
ES.9620.21	chr13	-	3202	6	NNC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	-29	3078	intron_retention	FALSE	non_canonical	0	0	junction_1	43.1722132858625	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	5189	False	NA	NA	False	NA	NA	NA	74765458	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74765320
ES.9620.22	chr13	-	4551	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18654	3078	intron_retention	FALSE	canonical	3	23	junction_3	27.3536509852382	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739499	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74730434_74739390
ES.9620.23	chr13	-	3922	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18292	3078	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.1178385878557	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739861	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74731765_74731993_74739578_74739708_74739787
ES.9620.24	chr13	-	5928	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	25805	3078	intron_retention	FALSE	non_canonical	0	0	junction_1	37.1064534668687	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	1912	False	NA	NA	False	NA	NA	NA	74732348	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232
ES.9620.25	chr13	-	3728	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18630	3078	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	30.2200264725232	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739523	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74739390
ES.9620.26	chr13	-	3399	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18654	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.6334083238646	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739499	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74731765_74731993_74739390
ES.9620.27	chr13	-	3290	8	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18288	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.0843078901679	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739865	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74739390_74739477_74739578_74739708_74739787
ES.9620.28	chr13	-	3646	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18609	3078	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	25.5868618630734	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739544	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74739390
ES.9620.29	chr13	-	3170	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18259	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3860436805399	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739894	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74739787
ES.9620.3	chr13	-	5833	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	4997	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.3275452353137	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGGGTGAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	74739524	74722479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730495_74731765_74731993_74739390
ES.9620.30	chr13	-	3129	5	NNC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-17	3078	intron_retention	TRUE	canonical	0	0	junction_1	42.2285448482422	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	5201	False	NA	NA	False	NA	NA	NA	74765446	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724652_74753292_74755855_74757240_74757302_74758318_74758446_74765320
ES.9620.31	chr13	-	5279	3	NNC	ENSMUSG00000113204.2	novel	1288	4	NA	NA	-978	3078	intron_retention	TRUE	non_canonical	0	0	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	9789	False	NA	NA	False	NA	NA	NA	74759131	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724610_74753250_74757362_74758174
ES.9620.32	chr13	-	3250	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3860436805399	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739524	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730487_74739390
ES.9620.33	chr13	-	4080	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18630	3078	intron_retention	FALSE	non_canonical	0	0	junction_1	38.1927676399603	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739523	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74730368_74739390
ES.9620.34	chr13	-	3870	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18655	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.4947661086271	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739498	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74738219_74738816_74739390
ES.9620.35	chr13	-	3499	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	27478	3078	intron_retention	TRUE	non_canonical	0	0	junction_1	38.4285050450834	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	3585	False	NA	NA	False	NA	NA	NA	74730675	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74726437_74727192_74727579_74728971_74729033_74729232
ES.9620.36	chr13	-	3033	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18623	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.4285050450834	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739530	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729314_74739390
ES.9620.37	chr13	-	3339	7	NNC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	32	3078	intron_retention	FALSE	non_canonical	0	0	junction_1	43.5076621604364	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	4858	False	NA	NA	False	NA	NA	NA	74765789	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758495_74759382_74759507_74765320_74765407_74765715
ES.9620.38	chr13	-	3255	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18260	3078	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.4134613749513	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCCTTGGTCATGATGT	NA	False	NA	NA	False	NA	NA	NA	74739893	74724398	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74739390_74739477_74739787
ES.9620.39	chr13	-	3465	9	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	-9	3077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.8694911139278	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	5209	False	NA	NA	False	NA	NA	NA	74765438	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74749282_74749446_74757240_74757302_74758318_74758446_74765320
ES.9620.4	chr13	-	4928	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	4092	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.3275452353137	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTGAGCCTATCCC	NA	False	NA	NA	False	CATAAA	-19	NA	74739524	74723384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730495_74731765_74731993_74739390
ES.9620.40	chr13	-	3929	5	ISM	ENSMUSG00000113204.2	ENSMUST00000221389.2	1049	11	26106	-3077	18259	3077	3prime_fragment	FALSE	canonical	1	1	junction_4	32.4143101114307	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739894	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74739390
ES.9620.41	chr13	-	3275	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18256	3077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.2839907040006	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739897	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74739787
ES.9620.42	chr13	-	3574	10	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	-9	3077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.6666666666667	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	5209	False	NA	NA	False	NA	NA	NA	74765438	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74749038_74749148_74749282_74749446_74757240_74757302_74758318_74758446_74765320
ES.9620.43	chr13	-	4190	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18291	3077	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	27.2	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739862	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74731765_74731993_74739390
ES.9620.44	chr13	-	3299	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	3077	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.585886515484	152	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739524	74724399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74739390
ES.9620.45	chr13	-	3640	9	NNC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	32	3076	intron_retention	FALSE	non_canonical	0	0	junction_1	40.3972461932741	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	4858	False	NA	NA	False	NA	NA	NA	74765789	74724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320_74765407_74765508_74765636_74765715
ES.9620.46	chr13	-	3236	6	NNC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	-25	3076	intron_retention	FALSE	non_canonical	0	0	junction_1	45.5780648996861	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	5193	False	NA	NA	False	NA	NA	NA	74765454	74724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74724480_74753117_74755855_74757240_74757302_74758318_74758486_74759382_74759441_74765320
ES.9620.47	chr13	-	3660	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18259	3076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.3860436805399	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74739894	74724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730368_74739578_74739708_74739787
ES.9620.48	chr13	-	3900	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	3076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.4444140030299	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74739524	74724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729409_74730309_74730434_74731765_74731993_74739390
ES.9620.49	chr13	-	3078	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18622	3076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.3579076082419	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74739531	74724400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74739390
ES.9620.5	chr13	-	4513	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18629	4089	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGTGTGTGAGCCTAT	NA	False	NA	NA	False	CATAAA	-16	NA	74739524	74723387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
ES.9620.51	chr13	-	4121	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18246	3075	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.4285050450834	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	74739907	74724401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74738722
ES.9620.52	chr13	-	3892	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18648	3075	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	30.3275452353137	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTTGCCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	74739505	74724401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74730309_74730495_74731765_74731993_74739390
ES.9620.53	chr13	-	3471	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18259	3074	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	36.2338086445365	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	74739894	74724402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739787
ES.9620.54	chr13	-	3666	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	17986	3074	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	32.1178385878557	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTGCCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	74740167	74724402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74731765_74731993_74739787
ES.9620.55	chr13	-	3603	1	Intergenic	novelGene_8045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8874	False	NA	NA	False	TTTAAA	-40	NA	74745479	74741876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74741900_74745500
ES.9620.56	chr13	-	4976	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	-6	7422	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.6037765074465	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGGACAAACATTGTCTCA	5212	False	NA	NA	False	NA	NA	NA	74765435	74745641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74750315_74757240_74757302_74758318_74758446_74765320
ES.9620.57	chr13	-	2540	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	32	4583	intron_retention	FALSE	canonical	0	0	junction_1	44.783429475148	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGAGCAGCCATGCCC	4858	False	NA	NA	False	NA	NA	NA	74765789	74748480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74750315_74757240_74757302_74758318_74758495_74765320
ES.9620.58	chr13	-	1853	4	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	-11	3902	intron_retention	FALSE	canonical	0	0	junction_1	40.6037765074465	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTTTCTAGTGCTAA	4815	False	NA	NA	False	ATTAAA	-20	NA	74765832	74749161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74750315_74757240_74757302_74758318_74758446_74765320
ES.9620.59	chr13	-	5033	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	216	-3878	-34	1686	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTGTGATCACTTTA	5184	False	NA	NA	False	AATAAA	-21	NA	74765463	74751377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
ES.9620.6	chr13	-	4139	7	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18259	4089	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.0930100362718	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGTGTGTGAGCCTAT	NA	False	NA	NA	False	CATAAA	-16	NA	74739894	74723387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74723548_74723583_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74739390_74739509_74739787
ES.9620.60	chr13	-	5049	5	NNC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-29	1682	intron_retention	FALSE	canonical	0	0	junction_4	39.8403062237227	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGCTGTGATCAC	5189	False	NA	NA	False	AATAAA	-17	NA	74765458	74751381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761093_74765320
ES.9620.61	chr13	-	4997	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	56	-3874	-16	1682	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGCTGTGATCAC	5274	False	NA	NA	False	AATAAA	-17	NA	74765373	74751381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
ES.9620.62	chr13	-	7371	4	NIC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	21	1682	intron_retention	FALSE	canonical	3	84	junction_3	4.78423336480244	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGCTGTGATCAC	5239	False	NA	NA	False	AATAAA	-17	NA	74765408	74751381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74761068_74765320
ES.9620.63	chr13	-	5118	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	393	-3522	1	1682	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGCTGTGATCAC	5219	False	NA	NA	False	AATAAA	-17	NA	74765428	74751381	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
ES.9620.64	chr13	-	4820	5	NNC	ENSMUSG00000113204.2	novel	631	5	NA	NA	32	1681	intron_retention	FALSE	canonical	1	2	junction_4	41.6112965431264	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTTTGCTGTGATCA	4858	False	NA	NA	False	AATAAA	-16	NA	74765789	74751382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320_74765407_74765715
ES.9620.65	chr13	-	4313	6	NNC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	-1	524	intron_retention	FALSE	canonical	0	0	junction_5	42.4810546008453	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	4825	False	NA	NA	False	ATTAAA	-19	NA	74765822	74752539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761093_74765320
ES.9620.66	chr13	-	4237	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	-150	-2716	-8	524	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	4818	False	NA	NA	False	ATTAAA	-19	NA	74765829	74752539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
ES.9620.67	chr13	-	3622	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	382	-2716	-10	524	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTGACTCTCCAGTTA	5208	False	NA	NA	False	ATTAAA	-19	NA	74765439	74752539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
ES.9620.68	chr13	-	4361	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	-9	-2363	-9	523	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	4817	False	NA	NA	False	ATTAAA	-18	NA	74765830	74752540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
ES.9620.69	chr13	-	3493	3	NIC	ENSMUSG00000113204.2	novel	1288	4	NA	NA	-10	522	intron_retention	FALSE	canonical	0	0	junction_2	46.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTCTGACTCTCCAGT	5208	False	NA	NA	False	ATTAAA	-17	NA	74765439	74752541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74765320
ES.9620.7	chr13	-	4521	9	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	9	4085	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.7064271148862	288	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAATGTGTGTGAGC	5227	False	NA	NA	False	CATAAA	-12	NA	74765420	74723391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74749282_74749446_74757240_74757302_74758318_74758446_74759382_74759507_74765320
ES.9620.70	chr13	-	3719	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	-152	-2196	-10	4	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTCATGATGTCTATT	4816	False	NA	-1	True	NA	NA	NA	74765831	74753059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
ES.9620.71	chr13	-	3382	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	-11	-2192	-11	0	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5207	False	NA	-5	True	NA	NA	NA	74765440	74753063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
ES.9620.72	chr13	-	4334	5	NIC	ENSMUSG00000113204.2	novel	1703	7	NA	NA	-26	0	intron_retention	FALSE	canonical	3	7	junction_3	36.4648803645371	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5192	False	NA	-5	True	NA	NA	NA	74765455	74753063	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74759441_74760842_74761068_74765320
ES.9620.73	chr13	-	3695	7	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	31	-1	intron_retention	FALSE	canonical	1	6	junction_6	38.8390553724241	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4857	False	NA	-6	True	NA	NA	NA	74765790	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320_74765407_74765508
ES.9620.74	chr13	-	3451	6	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	9	-1	intron_retention	FALSE	canonical	1	6	junction_5	35.3236464708841	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4977	False	NA	-6	True	NA	NA	NA	74765670	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320_74765407_74765508
ES.9620.75	chr13	-	4336	5	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	-35	-1	intron_retention	FALSE	canonical	3	18	junction_3	31.7372021451167	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	5255	False	NA	-6	True	NA	NA	NA	74765392	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74759507_74760842_74761068_74765320
ES.9620.76	chr13	-	3093	4	NNC	ENSMUSG00000113204.2	novel	1288	4	NA	NA	10	-1	intron_retention	FALSE	non_canonical	0	0	junction_3	44.3195467285285	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	5228	False	NA	-6	True	NA	NA	NA	74765419	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758462_74765320
ES.9620.77	chr13	-	3357	5	NIC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	17	-1	intron_retention	FALSE	canonical	0	0	junction_4	39.8403062237227	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4985	False	NA	-6	True	NA	NA	NA	74765662	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765508
ES.9620.78	chr13	-	6732	3	NIC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-6	-1	intron_retention	FALSE	canonical	3	84	junction_2	4.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	5212	False	NA	-6	True	NA	NA	NA	74765435	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74761068_74765320
ES.9620.79	chr13	-	3575	6	NIC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	-1	-1	intron_retention	FALSE	canonical	0	0	junction_5	42.4810546008453	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4825	False	NA	-6	True	NA	NA	NA	74765822	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765508
ES.9620.8	chr13	-	3577	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18256	3606	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	37.9605057922046	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCTCCAGTTACT	NA	False	NA	NA	False	ATTAAA	-21	NA	74739897	74723870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725525_74725953_74727579_74728971_74729033_74729232_74729360_74739787
ES.9620.80	chr13	-	3821	6	NNC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	-9	-1	intron_retention	FALSE	canonical	2	6	junction_2	37.1892457573423	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4817	False	NA	-6	True	NA	NA	NA	74765830	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74757587_74757696_74758318_74758446_74760842_74761068_74765320
ES.9620.81	chr13	-	3483	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	-4	-2191	-4	-1	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCCATGGTCATGATGT	4822	False	NA	-6	True	NA	NA	NA	74765825	74753064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
ES.9620.83	chr13	-	3332	6	NNC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	34	-2	intron_retention	FALSE	canonical	0	0	junction_5	42.4810546008453	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCATGGTCATGATG	4860	False	NA	-7	True	NA	NA	NA	74765787	74753065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765715
ES.9620.85	chr13	-	3363	6	NNC	ENSMUSG00000113204.2	novel	1179	6	NA	NA	-18	-3	intron_retention	FALSE	canonical	1	1	junction_3	42.6614580154031	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCCATGGTCATGAT	5272	False	NA	-8	True	NA	NA	NA	74765375	74753066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758495_74759382_74759441_74760842_74761068_74765320
ES.9620.86	chr13	-	5712	4	NIC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-6	-4	intron_retention	FALSE	canonical	3	84	junction_3	4.78423336480244	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGCCATGGTCATGA	5212	False	NA	-9	True	NA	NA	NA	74765435	74753067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74757302_74758318_74761068_74765320
ES.9620.87	chr13	-	3491	6	NNC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	-11	-6	intron_retention	FALSE	canonical	1	1	junction_3	40.2959054991943	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTGCCATGGTCAT	5207	False	NA	-11	True	NA	NA	NA	74765440	74753069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74755855_74757240_74757302_74758318_74758495_74759382_74759507_74760842_74761068_74765320
ES.9620.88	chr13	-	4243	2	FSM	ENSMUSG00000113204.2	ENSMUST00000223059.2	1512	2	-3053	322	-3053	34	multi-exon	FALSE	canonical	3	93	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTATGAATGTAATCA	9441	False	NA	NA	False	NA	NA	NA	74761206	74755577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74755855_74757240
ES.9620.89	chr13	-	4098	3	NIC	ENSMUSG00000113204.2	novel	1371	5	NA	NA	-9	-43	intron_retention	FALSE	canonical	3	84	junction_2	4.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGTCTCCAGTATCATA	5209	False	NA	NA	False	NA	NA	NA	74765438	74755701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74755855_74757240_74761068_74765320
ES.9620.9	chr13	-	3633	6	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18720	3605	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	30.5915020879982	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGACTCTCCAGTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	74739433	74723871	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74725518_74725946_74727579_74728971_74729033_74729232_74729360_74730309_74730434_74739390
ES.9621.1	chr13	+	3039	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	226	2379	-59	-2379	multi-exon	TRUE	canonical	1	4	junction_16	2.26077666104176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGATATTTTCTTATT	NA	False	NA	NA	False	ACTAAA	-20	NA	74787912	74838941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ES.9621.2	chr13	+	2406	11	FSM	ENSMUSG00000021583.8	ENSMUST00000220594.2	3009	11	-1	604	-1	-604	multi-exon	FALSE	canonical	1	5	junction_1	1.75783958312469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAACTTGACAAAATAT	NA	False	NA	NA	False	AATAAA	-18	NA	74787970	74816896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076
ES.9621.3	chr13	+	4029	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	291	1324	4	-1324	multi-exon	FALSE	canonical	1	4	junction_16	2.26077666104176	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGATGGCTTGTTGGCTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	74787977	74839996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ES.9622.1	chr13	-	157	1	Intergenic	novelGene_8046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74789081	74788924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_74788900_74789100
ES.9623.1	chr13	+	218	1	Intergenic	novelGene_8047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAAGAATGTTTAA	NA	False	NA	NA	False	AATAAA	-9	NA	74942940	74943158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_74942900_74943200
ES.9624.1	chr13	+	2916	2	Antisense	novelGene_ENSMUSG00000021585.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAAGACTATATCCTTT	NA	False	NA	NA	False	TTTAAA	-7	NA	74956815	74965226	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_74956876_74962370
ES.9625.1	chr13	-	4631	28	FSM	ENSMUSG00000021585.11	ENSMUST00000223126.2	2696	28	-46	-1889	13	2	multi-exon	TRUE	canonical	1	1	junction_4	30.9982520857727	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGCTATGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	74918755	74840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.10	chr13	-	4680	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	85	0	-2	0	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74918770	74840486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.11	chr13	-	4895	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	41.0258668181305	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74956069	74840486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ES.9625.12	chr13	-	5982	30	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-131	-1	intron_retention	FALSE	canonical	3	58	junction_29	28.4222869795211	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCTTGGCTATGTGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	74956771	74840487	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.15	chr13	-	4834	31	NNC	ENSMUSG00000021585.11	novel	2910	31	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	50.3477793838903	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTCTTGGCTATGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	74956057	74840488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848838_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886332_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928695_74946774_74946838_74955937
ES.9625.16	chr13	-	4183	31	NNC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-1	-896	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	37.1425033560684	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAATGTGCTCCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	74956930	74841382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872902_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.17	chr13	-	4005	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-14	-896	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	37.1226557681413	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAATGTGCTCCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	74956072	74841382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ES.9625.18	chr13	-	3800	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-20	-896	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAATGTGCTCCCTGTCT	NA	False	NA	NA	False	NA	NA	NA	74918729	74841382	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ES.9625.19	chr13	-	4088	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	153	900	-136	-900	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAGAATGTGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	74956776	74841386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.2	chr13	-	5683	28	NNC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	-15	2	intron_retention	FALSE	canonical	0	0	junction_12	30.9627414487912	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGCTATGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	74918783	74840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873604_74875393_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.20	chr13	-	4267	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-83	-900	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAGAATGTGCTCCCT	NA	False	NA	NA	False	NA	NA	NA	74957012	74841386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.22	chr13	-	4193	31	NNC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-50	-932	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	43.5181826622186	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74956979	74841418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844069_74847223_74847287_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.23	chr13	-	3128	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	83	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTTTCTTAGGAATGA	NA	False	NA	NA	False	NA	NA	NA	74956846	74842359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.25	chr13	-	3899	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	18	0	intron_retention	FALSE	canonical	3	49	junction_26	26.6169684638218	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTACTTTCTTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	74918750	74842361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ES.9625.26	chr13	-	2873	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	15	1877	15	-2	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCTACTTTCTTAGGA	NA	False	NA	NA	False	NA	NA	NA	74918840	74842363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.27	chr13	-	4221	28	ISM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	58419	1880	-13345	-5	3prime_fragment	FALSE	canonical	3	49	junction_27	23.1852443497056	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAACTCTACTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	74898510	74842366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923
ES.9625.28	chr13	-	3036	32	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-33	3	combination_of_known_junctions	FALSE	canonical	3	15	junction_31	37.1226557681413	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCCTGAACTCTACTTT	NA	False	NA	NA	False	NA	NA	NA	74956091	74842370	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ES.9625.29	chr13	-	2806	29	NNC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	7	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	31.0272058039392	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCCTGAACTCTACTT	NA	False	NA	NA	False	NA	NA	NA	74918761	74842371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889557_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.3	chr13	-	4932	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-135	2	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGCTATGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	74956775	74840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.30	chr13	-	3187	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	69	1885	69	2	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCCTGAACTCTACTT	NA	False	NA	NA	False	NA	NA	NA	74956860	74842371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.32	chr13	-	4606	28	NIC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	-5	1	intron_retention	FALSE	canonical	3	102	junction_27	16.4420251807341	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74918773	74842372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.33	chr13	-	2957	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	-13	-34	-13	1	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGCCTGAACTCTACT	NA	False	NA	NA	False	NA	NA	NA	74956071	74842372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ES.9625.34	chr13	-	2852	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGCCTGAACTCTAC	NA	False	NA	NA	False	AATAAA	-45	NA	74918772	74842373	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ES.9625.35	chr13	-	2770	28	FSM	ENSMUSG00000021585.11	ENSMUST00000223126.2	2696	28	-76	2	-17	-2	multi-exon	FALSE	canonical	1	1	junction_4	30.9982520857727	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCCTGCCTGAACTCT	NA	False	NA	NA	False	AATAAA	-43	NA	74918785	74842375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.38	chr13	-	3097	32	NNC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.9444536367469	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCTTTCCTGCCTGAA	NA	False	NA	NA	False	AATAAA	-39	NA	74956789	74842379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74844009_74844072_74847223_74847281_74848742_74848836_74849334_74849372_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.41	chr13	-	2859	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-122	-135	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	33.9593875091999	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGATTTCTTATTAT	NA	False	NA	NA	False	ACTAAA	-42	NA	74956762	74842541	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.43	chr13	-	2576	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	18	-161	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	26.471658891913	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATGCTCCCAACTT	NA	False	NA	NA	False	ACTAAA	-16	NA	74918750	74842567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.44	chr13	-	2474	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	-28	6	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTATTGAGTATTGAT	NA	False	NA	0	True	AATGAA	-19	NA	74918796	74842775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ES.9625.45	chr13	-	2368	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	105	2292	18	3	multi-exon	FALSE	canonical	3	102	junction_28	16.6207701385947	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTGTATTGAGTATT	NA	False	NA	-3	True	AATGAA	-16	NA	74918750	74842778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.46	chr13	-	2690	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	156	2295	-133	0	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74956773	74842781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.47	chr13	-	2638	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	-138	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74956778	74842781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.48	chr13	-	1768	19	NNC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	210	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.2346388904489	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74884955	74842781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_74842953_74843161_74843381_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863
ES.9625.5	chr13	-	4724	30	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	13	2	combination_of_known_junctions	FALSE	canonical	3	49	junction_27	26.473283146802	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGCTATGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	74918755	74840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ES.9625.50	chr13	-	2546	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	-13	377	-13	-2	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTGTTCTGTATTGA	NA	False	NA	-8	True	AATGAA	-11	NA	74956071	74842783	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ES.9625.6	chr13	-	5195	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	-52	-2	-52	2	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGCTATGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	74956981	74840484	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ES.9625.7	chr13	-	4623	28	NIC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	37.4959348505341	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74918755	74840486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ES.9625.8	chr13	-	5894	23	NIC	ENSMUSG00000021585.11	novel	4765	29	NA	NA	-8975	0	intron_retention	FALSE	canonical	3	116	junction_2	15.432872503815	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74894140	74840486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_74844072_74847223_74847293_74848742_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109
ES.9626.1	chr13	-	179	1	Intergenic	novelGene_8048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75003348	75003169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_75003200_75003300
ES.9627.1	chr13	-	298	1	Intergenic	novelGene_8049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75063000	75062702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_75062700_75063000
ES.9628.1	chr13	+	5013	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	27	0	27	0	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCATGAGAATAAGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	75237971	75282980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
ES.9628.2	chr13	+	2396	13	ISM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	35	4347	35	-4347	5prime_fragment	FALSE	canonical	1	7	junction_5	5.13363094375381	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATTTTAATTGTAATC	NA	False	NA	NA	False	ATTAAA	-13	NA	75237979	75278633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160
ES.9628.3	chr13	+	5644	12	NIC	ENSMUSG00000021587.6	novel	5040	14	NA	NA	21	0	intron_retention	FALSE	canonical	0	0	junction_7	6.38826403300395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCATGAGAATAAGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	75238055	75282980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75263355_75263457_75273968_75274203_75274842_75276063_75278160_75278323_75280060
ES.9628.4	chr13	+	2380	13	NIC	ENSMUSG00000021587.6	novel	5040	14	NA	NA	37	-2371	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	6.19307408858207	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCATTCGTCTCAGTGTT	NA	False	NA	NA	False	AATGAA	-9	NA	75238071	75280609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75280060
ES.9628.6	chr13	+	3332	2	ISM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	40246	-280	19254	280	3prime_fragment	FALSE	canonical	3	14	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGAAGGAAAAACTCAT	NA	False	NA	NA	False	AATAAA	-28	NA	75278190	75283260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_75278323_75280060
ES.9629.1	chr13	+	206	1	Intergenic	novelGene_8050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATTGTTTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	75508672	75508878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_75508700_75508900
ES.963.1	chr1	-	3820	1	Antisense	novelGene_ENSMUSG00000103996.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87796644	87792824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_87792800_87796600
ES.9630.1	chr13	-	3984	1	Intergenic	novelGene_8051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATGAAAAAAAAAGC	NA	False	NA	NA	False	AAAAAG	-17	NA	75753220	75749236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_75749200_75753200
ES.9631.1	chr13	+	385	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	-31	-78	-31	78	mono-exon	FALSE	NA	NA	NA	NA	NA	642	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCAGGAAATGACTAAT	3132	False	NA	NA	False	AATAAA	-38	NA	75792983	75793368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75793000_75793400
ES.9632.1	chr13	+	4310	2	Intergenic	novelGene_8052	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75805735	75810527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_75809801_75810282
ES.9633.1	chr13	+	3445	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-295	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	127.691583496595	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	5985	False	NA	NA	False	AATAAA	-26	NA	75855408	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855516_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.10	chr13	+	2346	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	722	1314	-106	355	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATCCAGTGTCTATAC	6174	False	NA	NA	False	AATAGA	-18	NA	75855597	75919169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.11	chr13	+	3727	13	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-102	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	163.089507633079	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6178	False	NA	NA	False	AATAAA	-26	NA	75855601	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898204_75901150_75901229_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.12	chr13	+	3367	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-90	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	128.240798809657	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAAAATAAGTGAATAAT	6190	False	NA	NA	False	AATAAA	-18	NA	75855613	75920472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855651_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.15	chr13	+	3335	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-88	-143	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	126.162434979672	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTCAGGTTGTCTTGT	6192	False	NA	NA	False	TATAAA	-15	NA	75855615	75920340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.16	chr13	+	3441	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-81	-146	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	133.689528385734	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGATTCAGGTTGTCT	6199	False	NA	NA	False	TATAAA	-12	NA	75855622	75920337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.17	chr13	+	9817	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-80	-3	intron_retention	FALSE	canonical	3	343	junction_2	39.2917294096353	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6200	False	NA	NA	False	AATAAA	-26	NA	75855623	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.19	chr13	+	3113	9	ISM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	748	4763	-80	-2979	5prime_fragment	FALSE	canonical	3	343	junction_2	42.1379801960179	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATACCAACCAGTACAG	6200	False	NA	NA	False	AATAAA	-28	NA	75855623	75915720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272
ES.9633.2	chr13	+	3670	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	573	139	-255	-139	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGTTGTCTTGTATTG	6025	False	NA	NA	False	TATAAA	-19	NA	75855448	75920344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.20	chr13	+	3501	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-78	-9	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	131.241799743832	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAATAAGTGAATAATTT	6202	False	NA	NA	False	AATAAA	-20	NA	75855625	75920474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.22	chr13	+	3599	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-67	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	128.283969612357	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6213	False	NA	NA	False	AATAAA	-26	NA	75855636	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911685_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.23	chr13	+	4926	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-66	-12	intron_retention	FALSE	canonical	3	343	junction_2	39.6691315760756	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCCAAAAATAAGTGAATAA	6214	False	NA	NA	False	AATAAA	-17	NA	75855637	75920471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.24	chr13	+	3327	10	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-62	-3	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	133.828340389314	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6218	False	NA	NA	False	AATAAA	-26	NA	75855641	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.25	chr13	+	3815	13	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-62	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	163.271161636776	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6218	False	NA	NA	False	AATAAA	-26	NA	75855641	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918382_75918585_75918664_75918710_75918798
ES.9633.26	chr13	+	3589	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-62	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	124.653702129321	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGTGAATAATTTT	6218	False	NA	NA	False	AATAAA	-21	NA	75855641	75920475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910282_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.27	chr13	+	3565	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-62	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	133.689528385734	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6218	False	NA	NA	False	AATAAA	-26	NA	75855641	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.28	chr13	+	3205	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	766	411	-62	-411	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATATACTGCTATAAAG	6218	False	NA	NA	False	AATAAA	-15	NA	75855641	75920072	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.3	chr13	+	3810	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	575	-3	-253	3	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTTGACGTGTATCA	6027	False	NA	NA	False	AATAAA	-32	NA	75855450	75920486	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.30	chr13	+	3673	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-61	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	128.453290864362	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6219	False	NA	NA	False	AATAAA	-26	NA	75855642	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898269_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.31	chr13	+	3435	11	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-59	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	174.493094419235	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGTGAATAATTTT	6221	False	NA	NA	False	AATAAA	-21	NA	75855644	75920475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75885893_75886010_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.34	chr13	+	3805	13	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-48	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	162.919629129076	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6232	False	NA	NA	False	AATAAA	-26	NA	75855655	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75872758_75872965_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.35	chr13	+	3447	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-48	-143	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	125.751755980708	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATTCAGGTTGTCTTGT	6232	False	NA	NA	False	TATAAA	-15	NA	75855655	75920340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898055_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.36	chr13	+	9571	7	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	4192	-3	intron_retention	FALSE	canonical	3	406	junction_1	28.4175219812628	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	NA	False	NA	NA	False	AATAAA	-26	NA	75898661	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75918710_75918798
ES.9633.4	chr13	+	3678	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-145	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	194.829910986163	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6135	False	NA	NA	False	AATAAA	-26	NA	75855558	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873076_75873114_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914333_75917657_75917830_75918664_75918710_75918798
ES.9633.5	chr13	+	2170	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	692	1520	-136	149	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCCAGATGAGTTGCT	6144	False	NA	NA	False	AATAAA	-18	NA	75855567	75918963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.7	chr13	+	3297	13	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-120	-3	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	119.135310559977	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6160	False	NA	NA	False	AATAAA	-26	NA	75855583	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798_75918878_75919251
ES.9633.8	chr13	+	3626	12	NNC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-110	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	128.262772630936	415	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAAAAATAAGTGAATAAT	6170	False	NA	NA	False	AATAAA	-18	NA	75855593	75920472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912208_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9633.9	chr13	+	3494	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-107	-3	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	126.162434979672	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAATAATTTTGACGT	6173	False	NA	NA	False	AATAAA	-26	NA	75855596	75920480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ES.9634.1	chr13	-	984	4	Genic_Genomic	ENSMUSG00000114125.2	novel	365	2	NA	NA	-168	86432	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGCTTAGTCTTTCG	NA	False	NA	NA	False	NA	NA	NA	75855459	75761848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_75762506_75763089_75763168_75834356_75834437_75855290
ES.9634.2	chr13	-	2499	1	NIC	ENSMUSG00000114125.2	novel	365	2	NA	NA	30	-4482	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGAAGTTTTTGTGGAG	NA	False	NA	NA	False	TTTAAA	-19	NA	75855261	75852762	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_75852800_75855300
ES.9635.1	chr13	-	4071	3	Antisense	novelGene_ENSMUSG00000113041.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGCGCAGCTAGACCTC	NA	False	NA	NA	False	NA	NA	NA	75898159	75855642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_75855915_75873069_75873119_75894409
ES.9635.2	chr13	-	268	1	Intergenic	novelGene_8053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATGAA	-36	NA	75861094	75860826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_75860800_75861100
ES.9636.1	chr13	-	177	1	Intergenic	novelGene_8054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	75970634	75970457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_75970500_75970600
ES.9637.1	chr13	+	417	1	Intergenic	novelGene_8055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	3125	False	NA	NA	False	NA	NA	NA	75970897	75971314	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_75970900_75971300
ES.9638.1	chr13	+	1306	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	37	2	4	-2	multi-exon	FALSE	canonical	3	287	junction_1	16	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTCCGGTTCT	NA	False	NA	28	True	ATTAAA	-20	NA	75988023	75998268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_75988295_75995288_75995418_75997362
ES.9638.3	chr13	+	3164	3	NNC	ENSMUSG00000021591.9	novel	1333	3	NA	NA	-2	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	143.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTCCGGTTCT	NA	False	NA	28	True	ATTAAA	-20	NA	75988026	75998268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_75988295_75995288_75997124_75997207
ES.9639.1	chr13	+	2107	1	Intergenic	novelGene_8057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAAAAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	76088305	76090412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_76088300_76090400
ES.964.1	chr1	-	180	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTATCATCATC	NA	False	NA	NA	False	NA	NA	NA	87829902	87829722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87829700_87829900
ES.9640.1	chr13	+	1123	1	Antisense	novelGene_ENSMUSG00000021589.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGCAGTTTACTTGGA	NA	False	NA	NA	False	NA	NA	NA	76091329	76092452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_76091300_76092500
ES.9641.1	chr13	-	5061	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	-75	-6	-17	6	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGTTCTGTAGTTATT	6571	False	NA	NA	False	AATAAA	-26	NA	76092061	76017649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.10	chr13	-	4046	13	NNC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.447587023532	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCAATGAAGTGTTCT	6612	False	NA	NA	False	AATAAA	-17	NA	76092020	76017658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76019540_76020504_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.12	chr13	-	5049	13	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	20	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	39.1161908790834	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCAATGAAGTGTTCT	6666	False	NA	NA	False	AATAAA	-17	NA	76091966	76017658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76022572_76022665_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.13	chr13	-	5230	13	NNC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	25	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	39.2579609760874	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	6613	False	NA	NA	False	AATAAA	-10	NA	76092019	76017665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76067871_76068099_76087570_76087758_76091325_76091552_76091649
ES.9641.14	chr13	-	7916	8	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	-4384	-10	intron_retention	FALSE	canonical	3	85	junction_4	12.1352917609116	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	NA	False	NA	NA	False	AATAAA	-10	NA	76065953	76017665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811
ES.9641.18	chr13	-	5048	12	NNC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	20	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	40.1616568095236	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	6608	False	NA	NA	False	AATAAA	-10	NA	76092024	76017665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76067871_76068099_76091325_76091552_76091649
ES.9641.19	chr13	-	3467	5	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	-4356	-10	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	47.140746706008	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	NA	False	NA	NA	False	AATAAA	-10	NA	76065925	76017665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76065811
ES.9641.2	chr13	-	3097	3	NNC	ENSMUSG00000021589.14	novel	303	4	NA	NA	906	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	54	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATGAAGTGTTCTGTAG	NA	False	NA	NA	False	AATAAA	-21	NA	76024608	76017654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76020581_76024289_76024387_76024534
ES.9641.20	chr13	-	4819	11	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	-23	-10	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	31.7567315698578	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	6623	False	NA	NA	False	AATAAA	-10	NA	76092009	76017665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.21	chr13	-	189	1	Intergenic	novelGene_8056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76023684	76023495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_76023500_76023700
ES.9641.22	chr13	-	1654	5	FSM	ENSMUSG00000021589.14	ENSMUST00000109606.3	1676	5	19	3	19	-3	multi-exon	FALSE	canonical	3	92	junction_4	10.5948100502085	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGGGTCGTTTTAT	6607	False	NA	NA	False	AATAAA	-21	NA	76092025	76060863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.23	chr13	-	3220	2	ISM	ENSMUSG00000021589.14	ENSMUST00000109606.3	1676	5	23721	5	-6754	-5	3prime_fragment	FALSE	canonical	3	120	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACATTTTGGGTCGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	76068323	76060865	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_76061574_76065811
ES.9641.4	chr13	-	7378	11	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	7	0	intron_retention	FALSE	canonical	3	85	junction_5	11.3401940018679	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGAAGTGTTCTGTA	6595	False	NA	NA	False	AATAAA	-20	NA	76092037	76017655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.5	chr13	-	4848	11	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	1	-2	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	30.6543634740635	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAATGAAGTGTTCTG	6589	False	NA	NA	False	AATAAA	-18	NA	76092043	76017657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76091325_76091552_76091649
ES.9641.6	chr13	-	4911	12	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	20	-2	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.2534295638756	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAATGAAGTGTTCTG	6608	False	NA	NA	False	AATAAA	-18	NA	76092024	76017657	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76027020_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.7	chr13	-	7107	12	NNC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	123	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	31.7929770299944	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCAATGAAGTGTTCT	6769	False	NA	NA	False	AATAAA	-17	NA	76091863	76017658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76059208_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9641.9	chr13	-	4427	9	NIC	ENSMUSG00000021589.14	novel	4980	12	NA	NA	17	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	35.9267918829388	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCAATGAAGTGTTCT	6605	False	NA	NA	False	AATAAA	-17	NA	76092027	76017658	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ES.9642.1	chr13	+	409	1	FSM	ENSMUSG00000061833.7	ENSMUST00000073790.7	878	1	512	-43	512	43	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGTAA	2887	False	NA	NA	False	AATAAA	-17	NA	76102766	76103175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76102800_76103200
ES.9643.1	chr13	-	6525	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	100	-5189	-8	4204	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTCTAATGTTTGTT	NA	False	NA	-10	True	NA	NA	NA	76166689	76145449	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ES.9643.2	chr13	-	6054	6	NNC	ENSMUSG00000043190.15	novel	2807	4	NA	NA	-4	4203	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0977088241309	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAACTCTAATGTTTGT	NA	False	NA	-11	True	NA	NA	NA	76166685	76145450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76147953_76148235_76150377_76150486_76151208_76156101_76156137_76156229_76156406_76166206
ES.9643.3	chr13	-	6099	6	NNC	ENSMUSG00000043190.15	novel	1436	4	NA	NA	24	4203	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	37.7221420388609	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAACTCTAATGTTTGT	NA	False	NA	-11	True	NA	NA	NA	76166657	76145450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76147953_76148235_76150377_76150486_76151208_76156101_76156137_76156229_76156406_76166133
ES.9643.4	chr13	-	4838	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	115	-3517	7	2532	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAATACTG	NA	False	NA	NA	False	AATAAA	-5	NA	76166674	76147121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ES.9643.5	chr13	-	6435	3	NIC	ENSMUSG00000043190.15	novel	2807	4	NA	NA	32	-2	intron_retention	FALSE	canonical	3	34	junction_2	21.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAGTAATTTTGTT	NA	False	NA	-11	True	NA	NA	NA	76166649	76150887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76156137_76156229_76156406_76165639
ES.9643.6	chr13	-	1629	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	-60	1238	48	-6	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTTTAAAGTAATTT	NA	False	NA	-15	True	NA	NA	NA	76166741	76150891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
ES.9643.7	chr13	-	554	4	FSM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	33	8	-16	-8	multi-exon	FALSE	canonical	2	9	junction_3	32.0555074137902	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAATATTTTAAAGTAAT	NA	False	NA	-17	True	NA	NA	NA	76166805	76150893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166776
ES.9643.8	chr13	-	4436	1	NIC	ENSMUSG00000043190.15	novel	2807	4	NA	NA	33	-6875	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAATAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	76166648	76162212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76162200_76166600
ES.9644.1	chr13	+	1722	1	Antisense	novelGene_ENSMUSG00000045509.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	76203757	76205479	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_76203800_76205500
ES.9645.1	chr13	+	6466	44	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	-5	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	50.0559557095965	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAGTATTTCATTGT	NA	False	NA	8	True	ATTAAA	-20	NA	76246847	76338049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283504_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.10	chr13	+	5730	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	40	-935	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76246892	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.100	chr13	+	2978	2	ISM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	5789	177	1087	-177	3prime_fragment	FALSE	canonical	3	252	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76334332	76338048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76335814_76336551
ES.9645.11	chr13	+	6558	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	43	375	43	-165	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTGTTATTTATATTT	NA	False	NA	19	True	ATTAAA	-31	NA	76246895	76338060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.13	chr13	+	5777	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	50	1149	50	-939	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTAACCTGTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	76246902	76337286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.14	chr13	+	5143	44	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	50	685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	49.7878897354068	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTATATTATTAGTA	NA	False	NA	16	True	AATAAA	-17	NA	76246902	76336828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76278319_76278445_76279326_76279581_76280976_76281084_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.16	chr13	+	5603	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	50	-933	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	43.1454706629054	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAACCTGTTTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-32	NA	76246902	76337292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.19	chr13	+	5315	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	55	1606	55	686	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76246907	76336829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.2	chr13	+	6629	46	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	35	-174	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	48.4802925468906	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGTATTTCATTGTTA	NA	False	NA	10	True	ATTAAA	-22	NA	76246887	76338051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76257137_76257210_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.20	chr13	+	6753	47	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	55	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	57.859409326721	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76246907	76338046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76257137_76257210_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76269332_76269482_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.21	chr13	+	5171	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	55	686	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	43.5885675764183	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76246907	76336829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.22	chr13	+	11332	43	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	-177	intron_retention	FALSE	canonical	3	133	junction_18	30.337967800257	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76246908	76338048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76333370_76335718_76335814_76336551
ES.9645.23	chr13	+	6422	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	-949	intron_retention	FALSE	canonical	3	135	junction_16	35.3804632085612	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCTTAGACAGAACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	76246908	76337276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.24	chr13	+	5270	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	43.2189971525952	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTCTTATTTTTTTAT	NA	False	NA	6	True	AATAAA	-7	NA	76246908	76336818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272912_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.26	chr13	+	6659	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	56	261	56	-51	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTTTTTAGTGTAGA	NA	False	NA	NA	False	ATTAAA	-26	NA	76246908	76338174	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.27	chr13	+	5251	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	684	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTATATTATTAGT	NA	False	NA	15	True	AATAAA	-16	NA	76246908	76336827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.28	chr13	+	5297	44	FSM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	56	28	56	-28	multi-exon	FALSE	canonical	3	133	junction_18	33.3040145082969	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTGATCATTTGATCC	NA	False	NA	NA	False	AATAAA	-21	NA	76246908	76336074	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ES.9645.3	chr13	+	5817	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	35	-935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_31	43.2731748926429	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76246887	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295809_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.30	chr13	+	4928	42	ISM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	58	4925	58	-4925	5prime_fragment	FALSE	canonical	3	133	junction_18	18.8556935764732	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATTTTGTCTCTTCTTT	NA	False	NA	NA	False	GATAAA	-19	NA	76246910	76331177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933
ES.9645.31	chr13	+	6350	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	59	-177	combination_of_known_splicesites	FALSE	canonical	2	3	junction_17	43.1454706629054	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76246911	76338048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.32	chr13	+	7154	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	59	-949	intron_retention	FALSE	canonical	3	133	junction_18	35.7610603071106	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCTTAGACAGAACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	76246911	76337276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.33	chr13	+	6455	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	59	-182	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	42.9939057650817	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTAATACTCAGTATTT	NA	False	NA	2	True	ATTAAA	-14	NA	76246911	76338043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.37	chr13	+	5299	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	59	686	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	55.0971109245431	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATATTATTAGTAT	NA	False	NA	17	True	AATAAA	-18	NA	76246911	76336829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273006_76275084_76275170_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281084_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.38	chr13	+	5222	44	NNC	ENSMUSG00000033991.10	novel	5381	44	NA	NA	59	-32	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	46.6032005530173	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAGTTTTGATCATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	76246911	76336070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254355_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ES.9645.4	chr13	+	3384	31	ISM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	36	42757	36	2913	5prime_fragment	FALSE	canonical	3	133	junction_18	12.5922815865734	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACCAAAATACTTATAAT	NA	False	NA	NA	False	NA	NA	NA	76246888	76293345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319
ES.9645.40	chr13	+	5551	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	64	794	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	43.2678568687719	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCACTCACTTTGGA	NA	False	NA	125	True	AATATA	-21	NA	76246916	76336937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256540_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.41	chr13	+	9769	43	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	64	-940	intron_retention	FALSE	canonical	1	5	junction_3	43.5715391619726	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAACTGTAACCTGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	76246916	76337285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254355_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.43	chr13	+	6991	46	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	64	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_19	57.7225120300713	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGTTACATTTGTGAAA	NA	False	NA	5	True	ATTAAA	-18	NA	76246916	76338437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76257137_76257210_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277660_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295960_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.44	chr13	+	6846	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGGTTACATTTGTGA	NA	False	NA	3	True	ATTAAA	-16	NA	76246921	76338435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.47	chr13	+	6582	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	70	-53	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACCCCTTTTTAGTGTA	NA	False	NA	NA	False	ATTAAA	-24	NA	76246922	76338172	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.48	chr13	+	5750	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	78	-953	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	43.1930129029727	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATTCTCTTAGACAGAA	NA	False	NA	NA	False	ATTAAA	-12	NA	76246930	76337272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283504_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.49	chr13	+	6592	46	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	91	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.34927736978	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76246943	76338048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247006_76247489_76247560_76252823_76252888_76253794_76253832_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.5	chr13	+	6947	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	36	-7	36	7	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATTTGTGAAACTTGT	NA	False	NA	10	True	ATTAAA	-23	NA	76246888	76338442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.50	chr13	+	6492	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	94	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.5448586956963	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAGTATTTCATTGT	NA	False	NA	8	True	ATTAAA	-20	NA	76246946	76338049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247006_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.51	chr13	+	5315	44	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	97	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5006239079428	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGATCATTTGATCCAT	NA	False	NA	NA	False	AATAAA	-23	NA	76246949	76336076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247006_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ES.9645.52	chr13	+	5290	44	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	101	-38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.5006239079428	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGCTACAGTTTTGAT	NA	False	NA	NA	False	AATAAA	-11	NA	76246953	76336064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246997_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ES.9645.53	chr13	+	6057	45	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	115	-935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.162166581011	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76246967	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247290_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.54	chr13	+	5806	44	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	115	1596	115	696	3prime_fragment	FALSE	canonical	3	133	junction_17	35.5771087249153	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAGTATGAAACATAGT	NA	False	NA	27	True	AATAAA	-28	NA	76246967	76336839	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.55	chr13	+	5279	45	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	125	558	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.162166581011	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGTTGTATTTAAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	76246977	76336701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247111_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.56	chr13	+	5375	45	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	316	683	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	43.0759467694286	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTTTATATTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	76247168	76336826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247273_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.57	chr13	+	5723	44	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	635	1159	635	-949	3prime_fragment	FALSE	canonical	3	133	junction_17	35.5771087249153	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCTTAGACAGAACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	76247487	76337276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.58	chr13	+	6491	44	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	635	-179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_20	43.6511318159744	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76247487	76338046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281078_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.6	chr13	+	5436	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	36	1504	36	788	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTGTATGTCACTCAC	NA	False	NA	119	True	AATATA	-15	NA	76246888	76336931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.61	chr13	+	5739	44	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	635	-951	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_27	43.4805489792261	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTCTTAGACAGAACT	NA	False	NA	NA	False	ATTAAA	-14	NA	76247487	76337274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288628_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.63	chr13	+	6879	44	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	635	3	635	-3	3prime_fragment	FALSE	canonical	3	133	junction_17	35.5771087249153	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACCTGGGTTACATTTG	NA	False	NA	0	True	ATTAAA	-13	NA	76247487	76338432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.64	chr13	+	6434	44	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	635	-181	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	49.1041651727984	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTAATACTCAGTATTTC	NA	False	NA	3	True	ATTAAA	-15	NA	76247487	76338044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281084_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.65	chr13	+	6360	42	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	7493	389	-7342	-179	3prime_fragment	FALSE	canonical	3	133	junction_15	36.2652499256703	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76254345	76338046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.66	chr13	+	5457	41	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	-1806	-933	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	57.5755156294757	353	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAACCTGTTTTTTTTCC	NA	False	NA	NA	False	ATTAAA	-32	NA	76259881	76337292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76259936_76260293_76260386_76261156_76261246_76261671_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76273860_76274015_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.67	chr13	+	5068	38	NNC	ENSMUSG00000033991.10	novel	818	7	NA	NA	-438	-935	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6722873932554	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76261249	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76261269_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.68	chr13	+	5377	30	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	28761	0	479	0	3prime_fragment	FALSE	canonical	3	133	junction_3	40.7538651756354	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGGTTACATTTGTGA	NA	False	NA	3	True	ATTAAA	-16	NA	76275613	76338435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.69	chr13	+	4953	27	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	-2074	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	62.928483875271	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTGGGTTACATTTGT	NA	False	NA	1	True	ATTAAA	-14	NA	76278319	76338433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288649_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305373_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.7	chr13	+	6495	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	36	-174	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGTATTTCATTGTTA	NA	False	NA	10	True	ATTAAA	-22	NA	76246888	76338051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.70	chr13	+	4472	27	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	-1975	-172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	53.4492514934222	354	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTATTTCATTGTTATT	NA	False	NA	12	True	ATTAAA	-24	NA	76278418	76338053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76278445_76279337_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.72	chr13	+	4918	25	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	-1006	684	intron_retention	FALSE	canonical	3	136	junction_10	42.3747951486363	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTATATTATTAGT	NA	False	NA	15	True	AATAAA	-16	NA	76279387	76336827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.75	chr13	+	2750	18	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	40752	1145	1641	-935	3prime_fragment	FALSE	canonical	3	136	junction_2	44.3357744902915	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76287604	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.76	chr13	+	2433	15	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	46465	1151	-3249	-941	3prime_fragment	FALSE	canonical	3	167	junction_1	42.485591795385	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGAACTGTAACCTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	76293317	76337284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.77	chr13	+	2562	9	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	8831	-55	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	108.467088902579	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGACCCCTTTTTAGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	76305397	76338170	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76329594_76329655_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.78	chr13	+	2057	6	NNC	ENSMUSG00000033991.10	novel	549	2	NA	NA	-2086	-179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.831980593941	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76326457	76338046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76326517_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.79	chr13	+	1239	5	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	81308	1150	-383	-940	3prime_fragment	FALSE	canonical	3	191	junction_1	40.8985024175703	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAACTGTAACCTGTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	76328160	76337285	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.8	chr13	+	6366	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	36	574	36	-364	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTTTTTTTGTTTG	NA	False	NA	NA	False	AGTAAA	-20	NA	76246888	76337861	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.80	chr13	+	1965	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	-28	179	-28	-179	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76328515	76338046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.81	chr13	+	2985	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	-28	-178	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.425903332032	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTCAGTATTTCATT	NA	False	NA	6	True	ATTAAA	-18	NA	76328515	76338047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76329655_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.82	chr13	+	1785	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	0	-367	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTCCAGTCTTTTTTTGT	NA	False	NA	NA	False	AGTAAA	-17	NA	76328543	76337858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.83	chr13	+	3016	4	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	81692	1607	1	685	3prime_fragment	FALSE	canonical	3	252	junction_3	18.3847763108502	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTATATTATTAGTA	NA	False	NA	16	True	AATAAA	-17	NA	76328544	76336828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.84	chr13	+	754	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	1	685	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTATATTATTAGTA	NA	False	NA	16	True	AATAAA	-17	NA	76328544	76336828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.85	chr13	+	716	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	1	1399	1	683	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTTTATATTATTAG	NA	False	NA	14	True	AATAAA	-15	NA	76328544	76336826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.86	chr13	+	4237	4	ISM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	81692	386	1	-176	3prime_fragment	FALSE	canonical	3	252	junction_3	18.3847763108502	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAGTATTTCATTGT	NA	False	NA	8	True	ATTAAA	-20	NA	76328544	76338049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.87	chr13	+	3346	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.425903332032	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGTTACATTTGTGAAA	NA	False	NA	5	True	ATTAAA	-18	NA	76328544	76338437	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76329655_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.88	chr13	+	3075	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	2	-929	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.425903332032	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTTTTTTTCCATTT	NA	False	NA	NA	False	ATTAAA	-36	NA	76328545	76337296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76330526_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.89	chr13	+	1209	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	2	-941	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGAACTGTAACCTGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	76328545	76337284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.9	chr13	+	5271	44	NIC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	37	694	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	42.9939057650817	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATTAGTATGAAACATA	NA	False	NA	25	True	AATAAA	-26	NA	76246889	76336837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_76246949_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.90	chr13	+	1736	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	2	685	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.425903332032	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTATATTATTAGTA	NA	False	NA	16	True	AATAAA	-17	NA	76328545	76336828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76329655_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.91	chr13	+	620	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	2	552	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTATATGGTTGTATTT	NA	False	NA	NA	False	TATAAA	-12	NA	76328545	76336695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.92	chr13	+	1236	6	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	3	-937	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.934144755791	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTAACCTGTTTTTT	NA	False	NA	NA	False	ATTAAA	-28	NA	76328546	76337288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328636_76329594_76329655_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.93	chr13	+	1972	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	4	-176	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAGTATTTCATTGT	NA	False	NA	8	True	ATTAAA	-20	NA	76328547	76338049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.94	chr13	+	2378	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	4	-266	4	56	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCCCATGTGGCTCTC	NA	False	NA	59	True	NA	NA	NA	76328547	76338491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.95	chr13	+	3825	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	4	-177	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.425903332032	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTCAGTATTTCATTG	NA	False	NA	7	True	ATTAAA	-19	NA	76328547	76338048	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76330526_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.96	chr13	+	3353	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	4	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	121.425903332032	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACTCAGTATTTCATT	NA	False	NA	6	True	ATTAAA	-18	NA	76328547	76338047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76330055_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.98	chr13	+	3069	6	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	16	-183	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	136.934144755791	352	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACTAATACTCAGTATT	NA	False	NA	1	True	ATTAAA	-13	NA	76328559	76338042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_76329655_76330250_76330384_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ES.9645.99	chr13	+	960	3	ISM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	4700	935	-2	-935	3prime_fragment	FALSE	canonical	3	252	junction_2	19.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTAACCTGTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	76333243	76337290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_76333370_76335718_76335814_76336551
ES.9646.1	chr13	-	1549	2	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	15339	10	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCTTTTTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	76210160	76208530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76208851_76208931
ES.9646.10	chr13	-	1457	7	NIC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-16	-2029	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	10.5145401970583	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGCGTAGGGCAAAA	9817	False	NA	NA	False	AATAAA	-19	NA	76246738	76210569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76246492
ES.9646.11	chr13	-	1545	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	82	2030	-17	-2030	multi-exon	FALSE	canonical	3	9	junction_3	7.18558647997674	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAAAGCGTAGGGCAAA	9858	False	NA	NA	False	AATAAA	-18	NA	76246697	76210570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ES.9646.12	chr13	-	1980	10	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	24	-2030	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.6559408779503	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAAAGCGTAGGGCAAA	9800	False	NA	NA	False	AATAAA	-18	NA	76246755	76210570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76210722_76213398_76213624_76214753_76214979_76215068_76215208_76220214_76220391_76222893_76223171_76237234_76237469_76239776_76239937_76242006_76242137_76246492
ES.9646.13	chr13	-	3869	1	Intergenic	novelGene_8058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	76246474	76242605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_76242600_76246500
ES.9646.2	chr13	-	3218	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	5	434	5	-434	multi-exon	TRUE	canonical	3	9	junction_3	7.18558647997674	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAATCTCTATTTTGTGC	9781	False	NA	NA	False	AATAAA	-37	NA	76246774	76208974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ES.9646.3	chr13	-	3320	8	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-39	-438	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.9252166128772	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATCAATCTCTATTTT	9737	False	NA	NA	False	AATAAA	-33	NA	76246818	76208978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76210722_76213398_76213624_76214753_76214979_76222893_76223171_76237234_76237469_76239776_76239937_76242006_76242137_76246492
ES.9646.4	chr13	-	2584	5	NIC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-16	-453	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.6372811683044	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCTTTAAAATGTTT	9817	False	NA	NA	False	AATAAA	-18	NA	76246738	76208993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76210722_76213398_76213624_76214753_76214979_76239776_76239937_76246492
ES.9646.5	chr13	-	3527	9	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-96	-460	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	11.146748404804	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAATATTCTTTAA	9680	False	NA	NA	False	AATAAA	-11	NA	76246875	76209000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76237234_76237469_76239776_76239937_76242006_76242137_76246492
ES.9646.6	chr13	-	2723	6	NIC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	25	-460	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	11.6619037896906	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAATATTCTTTAA	9801	False	NA	NA	False	AATAAA	-11	NA	76246754	76209000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76210722_76213398_76213624_76214753_76214979_76239776_76239937_76242006_76242137_76246492
ES.9646.7	chr13	-	2977	7	NIC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	-9	-460	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10.6523341208499	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAATATTCTTTAA	9824	False	NA	NA	False	AATAAA	-11	NA	76246731	76209000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_76210722_76213398_76213624_76214753_76214979_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ES.9646.8	chr13	-	1960	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	2	1695	2	-1695	multi-exon	FALSE	canonical	3	9	junction_3	7.18558647997674	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGAATATGTTGGTAC	9778	False	NA	NA	False	AATAAA	-14	NA	76246777	76210235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ES.9646.9	chr13	-	1861	9	NNC	ENSMUSG00000021592.19	novel	3657	8	NA	NA	1	-2029	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	11.146748404804	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAGCGTAGGGCAAAA	9777	False	NA	NA	False	AATAAA	-19	NA	76246778	76210569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76237234_76237469_76239776_76239937_76242006_76242137_76246492
ES.9647.1	chr13	-	6238	1	Antisense	novelGene_ENSMUSG00000033991.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCATACTATAGGCAAAT	NA	False	NA	NA	False	NA	NA	NA	76275797	76269559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_76269600_76275800
ES.9648.1	chr13	+	10216	1	FSM	ENSMUSG00000114664.2	ENSMUST00000225364.2	1876	1	-8344	4	-8344	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTTTCTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-11	NA	76338765	76348981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_76338800_76349000
ES.9649.1	chr13	+	180	1	Intergenic	novelGene_8059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	76377348	76377528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_76377300_76377500
ES.965.1	chr1	-	6107	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-13	-2117	3	793	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTACTCCAATTCCT	NA	False	NA	NA	False	TATAAA	-36	NA	87936269	87872047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.10	chr1	-	8853	10	NIC	ENSMUSG00000005501.15	novel	4633	13	NA	NA	-3211	-7	intron_retention	FALSE	canonical	3	43	junction_1	7.17678011642451	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTCAACTCTGTCATAT	NA	False	NA	-16	True	AATAAA	-17	NA	87898128	87872849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87876319_87877653_87877750_87877880_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905
ES.965.11	chr1	-	5227	32	NNC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_22	11.1056790976781	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTCAACTCTGTCATAT	NA	False	NA	-16	True	AATAAA	-17	NA	87936269	87872849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913841_87916603_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.13	chr1	-	5414	34	NNC	ENSMUSG00000005501.15	novel	4109	33	NA	NA	-5	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.5643641231996	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTCAACTCTGTCATAT	NA	False	NA	-16	True	AATAAA	-17	NA	87936278	87872849	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881733_87881774_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87896326_87896387_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.16	chr1	-	5355	33	NNC	ENSMUSG00000005501.15	novel	4109	33	NA	NA	-19	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_30	13.6870362364356	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCCTCAACTCTGTCAT	NA	False	NA	-18	True	AATAAA	-15	NA	87936292	87872851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87932983_87933013_87934946_87935165_87936159
ES.965.17	chr1	-	6591	30	NNC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	-7	-20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	14.1386879528246	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAAGTTGCAGTCCTC	NA	False	NA	-29	True	AATAAA	-4	NA	87936263	87872862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87910058_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.18	chr1	-	5517	14	ISM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	37330	-1284	-4009	-38	3prime_fragment	FALSE	canonical	3	43	junction_2	6.76485872797558	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAATAAAACATT	NA	False	NA	-47	True	AATAGA	-31	NA	87898926	87872880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117
ES.965.19	chr1	-	5073	29	NIC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	3	-38	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	11.4951187511065	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAATAAAACATT	NA	False	NA	-47	True	AATAGA	-31	NA	87936269	87872880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.2	chr1	-	5491	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-2	-1512	-2	188	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGGCTGTTGAGTAG	NA	False	NA	NA	False	AATAAA	-27	NA	87936258	87872652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.21	chr1	-	3913	32	NNC	ENSMUSG00000005501.15	novel	4633	13	NA	NA	-2	1493	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.9290589175895	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGGAGTTCATTGTGC	NA	False	NA	NA	False	NA	NA	NA	87936258	87875927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87876127_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.22	chr1	-	3757	31	NNC	ENSMUSG00000005501.15	novel	1725	11	NA	NA	-29	155	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.9323170259353	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCATTGTCCTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	87936302	87877265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87877360_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.23	chr1	-	191	1	Genic_Genomic	ENSMUSG00000005501.15	novel	NA	NA	NA	NA	1797	13	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGAGAAGCTTACCAAA	NA	False	NA	NA	False	NA	NA	NA	87877598	87877407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_87877400_87877600
ES.965.24	chr1	-	169	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87884873	87884704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87884700_87884900
ES.965.25	chr1	-	3909	1	FSM	ENSMUSG00000005501.15	ENSMUST00000190446.2	2179	1	-27	-1703	-27	1703	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATACCTTTCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	87894944	87891035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87891000_87894900
ES.965.26	chr1	-	3001	2	ISM	ENSMUSG00000005501.15	ENSMUST00000189409.7	4633	13	7743	18195	-960	1703	intron_retention	FALSE	canonical	3	45	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATACCTTTCCTGTTA	NA	False	NA	NA	False	NA	NA	NA	87895877	87891035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_87893065_87894905
ES.965.27	chr1	-	2596	18	ISM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-25	27562	-8	-8988	5prime_fragment	FALSE	canonical	3	37	junction_16	5.9716747779814	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGATTTAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	87936281	87901726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.28	chr1	-	1690	2	FSM	ENSMUSG00000005501.15	ENSMUST00000189586.2	1661	2	3	-32	3	32	multi-exon	FALSE	canonical	3	54	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGCCTTAAGAACAGA	NA	False	NA	NA	False	NA	NA	NA	87936269	87933584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87935165_87936159
ES.965.29	chr1	-	2667	1	FSM	ENSMUSG00000005501.15	ENSMUST00000187871.2	2335	1	-311	-21	-6	21	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAAAAATAGCC	NA	False	NA	NA	False	AGTAAA	-35	NA	87936262	87933595	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87933600_87936300
ES.965.3	chr1	-	6136	12	ISM	ENSMUSG00000005501.15	ENSMUST00000189409.7	4633	13	6706	0	-1997	0	3prime_fragment	FALSE	canonical	3	43	junction_1	6.99822881960645	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCATATACTGCCTGC	NA	False	NA	-7	True	AATAAA	-26	NA	87896914	87872840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231
ES.965.4	chr1	-	5346	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-45	-1324	-28	0	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCATATACTGCCTGC	NA	False	NA	-7	True	AATAAA	-26	NA	87936301	87872840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.5	chr1	-	5251	31	NIC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_13	9.9154200897166	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTCATATACTGCCTG	NA	False	NA	-8	True	AATAAA	-25	NA	87936261	87872841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.6	chr1	-	3146	17	NNC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	-2563	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	23.5474919046594	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	False	NA	-9	True	AATAAA	-24	NA	87906183	87872842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881733_87881774_87881871_87881968_87884932_87885057_87887510_87887616_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87903529_87903654_87906032
ES.965.7	chr1	-	5292	32	NNC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.1376778012928	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	False	NA	-9	True	AATAAA	-24	NA	87936269	87872842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_87874430_87876223_87876319_87877653_87877744_87877894_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ES.965.8	chr1	-	4158	13	NIC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	-1344	-5	intron_retention	FALSE	canonical	3	43	junction_2	6.87386354243376	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAACTCTGTCATATAC	NA	False	NA	-14	True	AATAAA	-19	NA	87896261	87872847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117
ES.965.9	chr1	-	5216	31	NIC	ENSMUSG00000005501.15	novel	3977	32	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_29	11.0953443689985	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCAACTCTGTCATATA	NA	False	NA	-15	True	AATAAA	-18	NA	87936247	87872848	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87934946_87935165_87936159
ES.9650.1	chr13	-	5444	23	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-2	1806	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	50.7303884673633	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTCTGTTTGTGTTTTAT	NA	False	NA	NA	False	AATGAA	-19	NA	77283581	77189400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77190116_77190522_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.10	chr13	-	3641	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	35.2448499214194	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283603	77191206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.11	chr13	-	3643	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	41.8862726175893	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283605	77191206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.12	chr13	-	8394	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	26	-1	intron_retention	TRUE	non_canonical	0	0	junction_20	43.7675679013582	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77279369	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77277894_77277935
ES.9650.13	chr13	-	3607	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-5	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	35.2448499214194	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283597	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.14	chr13	-	3479	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-21	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	34.6410161513775	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283613	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.15	chr13	-	5047	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-3	-1	intron_retention	FALSE	canonical	3	56	junction_14	27.0124624977788	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283595	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.16	chr13	-	4278	21	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	20	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	37.8148119127942	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283537	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77282884
ES.9650.17	chr13	-	6070	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-12	-1	intron_retention	FALSE	canonical	3	56	junction_13	26.4185797881849	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283604	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77240531_77249040_77249176_77251599_77251744_77252652_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.18	chr13	-	6271	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-34	-1	intron_retention	FALSE	canonical	3	56	junction_13	27.7378907222134	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283626	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.19	chr13	-	4891	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-1	-1	intron_retention	FALSE	canonical	1	1	junction_12	47.0289590751247	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATAGTCTTTAGTT	NA	False	NA	-3	True	AATAAA	-21	NA	77283585	77191207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.2	chr13	-	4845	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-1	1800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	42.9754809950861	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTCGGGTCTGTTTGTG	NA	False	NA	NA	False	AATGAA	-13	NA	77283585	77189406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77190116_77190522_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.20	chr13	-	3974	22	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_21	42.8995557329696	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCATAGTCTTTAGT	NA	False	NA	-4	True	AATAAA	-20	NA	77283586	77191208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276678_77283471
ES.9650.21	chr13	-	3751	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_13	36.3862611434591	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCATAGTCTTTAGT	NA	False	NA	-4	True	AATAAA	-20	NA	77283571	77191208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.23	chr13	-	3496	19	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-13	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	34.6410161513775	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	-5	True	AATAAA	-19	NA	77283605	77191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.24	chr13	-	3603	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-4	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	36.5785456244504	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	-5	True	AATAAA	-19	NA	77283596	77191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239318_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.25	chr13	-	3525	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	8	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_11	42.5517839930085	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	-5	True	AATAAA	-19	NA	77283571	77191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77249040_77249176_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.27	chr13	-	6811	17	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_5	36.0493910316111	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	-5	True	AATAAA	-19	NA	77283584	77191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77240531_77249040_77249176_77251599_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.28	chr13	-	3988	22	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-11	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.5759805248667	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTCATAGTCTTTAG	NA	False	NA	-5	True	AATAAA	-19	NA	77283603	77191209	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192144_77194636_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276678_77283471
ES.9650.29	chr13	-	6268	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-9	-6	intron_retention	FALSE	canonical	1	4	junction_12	36.573456611754	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283601	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249203_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.3	chr13	-	5092	22	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	13	1800	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36.9554490626146	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTCGGGTCTGTTTGTG	NA	False	NA	NA	False	AATGAA	-13	NA	77283544	77189406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77190116_77190522_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.30	chr13	-	4261	13	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	28590	-6	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	39.0949698384161	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77250805	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239485_77240476_77240531_77249040
ES.9650.32	chr13	-	3698	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-2	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	36.6757413013016	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283586	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273553_77274483_77274560_77274719_77274834_77283471
ES.9650.33	chr13	-	3770	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-7	-6	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	35.542193235646	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283599	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239485_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.34	chr13	-	3999	22	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	46.7836725593512	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283605	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273553_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.35	chr13	-	4028	22	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	41.8720651660488	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283597	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.36	chr13	-	3718	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	44.4504218202707	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283573	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252775_77254094_77254242_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.38	chr13	-	3799	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	45	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_13	47.190994903689	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	False	NA	-8	True	AATAAA	-16	NA	77283512	77191212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.4	chr13	-	5590	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-7	1799	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	49.0811572805695	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGTTCGGGTCTGTTTGT	NA	False	NA	NA	False	AATGAA	-12	NA	77283599	77189407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77190121_77190526_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77282884
ES.9650.40	chr13	-	5942	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	77	junction_13	23.0391507902484	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATGTTTCATAGTCT	NA	False	NA	-9	True	AATAAA	-15	NA	77283587	77191213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.41	chr13	-	3746	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-13	-8	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	36.4785896108937	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTATGTTTCATAGTC	NA	False	NA	-10	True	AATAAA	-14	NA	77283605	77191214	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194646_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.42	chr13	-	3481	21	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-8	-235	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	36.1912972964496	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACAGATTTGTTCTTC	NA	False	NA	NA	False	TATAAA	-18	NA	77283565	77191441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198157_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.43	chr13	-	3174	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	10	563	2	320	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTGCCTGAGAATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	77283582	77191769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.44	chr13	-	2937	20	NNC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	1	93	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	47.7628026665056	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTGAATTTGGTTCG	NA	False	NA	NA	False	NA	NA	NA	77283578	77191996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77276442_77276725_77283471
ES.9650.45	chr13	-	4053	15	ISM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	76	21470	41	-20587	5prime_fragment	FALSE	canonical	3	56	junction_8	26.7879999024845	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACCCTATTTGTCTAAT	NA	False	NA	NA	False	NA	NA	NA	77283516	77212676	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.46	chr13	-	2118	6	FSM	ENSMUSG00000021597.17	ENSMUST00000162320.2	1241	6	29	-906	7	-40	multi-exon	FALSE	canonical	3	90	junction_1	13.9283882771841	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATGTTAGTGATAG	NA	False	NA	NA	False	AATAAA	-13	NA	77283550	77252778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.47	chr13	-	1990	6	FSM	ENSMUSG00000021597.17	ENSMUST00000162320.2	1241	6	14	-763	-8	-183	multi-exon	FALSE	canonical	3	90	junction_1	13.9283882771841	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTAATGTCATGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	77283565	77252921	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.48	chr13	-	1281	1	Intergenic	novelGene_8060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-14	NA	77257804	77256523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_77256500_77257800
ES.9650.49	chr13	-	177	1	Intergenic	novelGene_8061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	77262502	77262325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_77262300_77262500
ES.9650.7	chr13	-	3617	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	34.3358836872922	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTCTTTAGTTGTT	NA	False	NA	0	True	AATAAA	-24	NA	77283604	77191204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9650.8	chr13	-	3789	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	-40	-2	-40	2	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATAGTCTTTAGTTGTT	NA	False	NA	0	True	AATAAA	-24	NA	77283632	77191204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ES.9651.1	chr13	+	646	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	-17	-13	-6	13	multi-exon	FALSE	canonical	3	44	junction_1	11	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTGATGTGAAGCACA	NA	False	NA	NA	False	AATAAA	-30	NA	77283652	77332136	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_77283750_77322971_77323104_77331719
ES.9651.2	chr13	+	1341	5	NNC	ENSMUSG00000071252.7	novel	5051	20	NA	NA	-6	10678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.4885177174936	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTCGTTTGTTTC	NA	False	NA	NA	False	AATAGA	-15	NA	77283652	77352511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77341343_77352238
ES.9651.3	chr13	+	1651	5	NNC	ENSMUSG00000071252.7	novel	1539	4	NA	NA	23	224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.4885177174936	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGAAGTATATTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	77283695	77342057	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77340897_77340985
ES.9652.1	chr13	+	5861	1	Intergenic	novelGene_8062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGACTGTTCTTATAAG	NA	False	NA	NA	False	AATAAA	-14	NA	77353536	77359397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_77353500_77359400
ES.9653.1	chr13	+	4490	14	NNC	ENSMUSG00000071252.7	novel	5051	20	NA	NA	69079	1519	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	1.64622573531021	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAGTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	77410231	77763422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421_77480578_77482387_77482483_77760645_77762935_77763243
ES.9654.1	chr13	-	140	1	Intergenic	novelGene_8063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77697827	77697687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_77697700_77697800
ES.9655.1	chr13	+	3607	1	Genic_Genomic	ENSMUSG00000064138.15	novel	NA	NA	NA	NA	-3460	-21988	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	77846691	77850298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_77846700_77850300
ES.9656.1	chr13	+	3706	9	FSM	ENSMUSG00000064138.15	ENSMUST00000099358.5	2242	9	-7	-1457	-3	3	multi-exon	TRUE	canonical	1	4	junction_4	35.0408244052562	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTCTTCTGTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	77856805	78314357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.10	chr13	+	5921	7	ISM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	29	209148	0	4983	5prime_fragment	FALSE	canonical	3	96	junction_5	7.11219609778396	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTGTTGTCTCATTTT	NA	False	NA	NA	False	ATTAAA	-9	NA	77856837	78105206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103
ES.9656.11	chr13	+	3982	11	FSM	ENSMUSG00000064138.15	ENSMUST00000163257.9	1436	11	29	-2575	0	-5	multi-exon	FALSE	canonical	2	7	junction_2	38.9	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAACTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	77856837	78314349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_77856973_77890881_77891006_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.12	chr13	+	1229	9	ISM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	29	159674	0	54457	5prime_fragment	FALSE	canonical	3	89	junction_7	9.17877987534291	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAAACTGTTTATAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	77856837	78154680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506
ES.9656.13	chr13	+	3852	8	NNC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	5	6673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.1554923563785	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTATAGTCTTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	77856842	78106896	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78103977
ES.9656.14	chr13	+	3792	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	35.8152813056103	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	77856847	78314359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.15	chr13	+	3747	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	1	-4	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	35.2258339148983	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCAACTGTGTCTTCT	NA	False	NA	NA	False	AATAAA	-9	NA	77856848	78314350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_77856973_77907546_77907649_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.16	chr13	+	3963	11	NNC	ENSMUSG00000064138.15	novel	1904	11	NA	NA	1	-5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_9	42.4023584249744	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAACTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	77856848	78314349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78186912_78187029_78311631
ES.9656.18	chr13	+	2343	8	NNC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	5	-104261	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	37.1554923563785	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTGATTTTCATGTG	NA	False	NA	NA	False	NA	NA	NA	77856852	78207513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78206093
ES.9656.19	chr13	+	3635	11	NNC	ENSMUSG00000064138.15	novel	1904	11	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	32.5547231596277	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGTGTCTTCTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	77856948	78314355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631_78311771_78311888
ES.9656.2	chr13	+	3899	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	-2	-5	-2	5	multi-exon	FALSE	canonical	3	89	junction_7	8.92907582349531	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	77856806	78314359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.20	chr13	+	3705	8	NNC	ENSMUSG00000064138.15	novel	1436	11	NA	NA	101621	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.0823683280387	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGTGTCTTCTGTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	77958523	78314355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77958703_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.21	chr13	+	4614	1	Intergenic	novelGene_8064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATTTGTTTATATCAT	NA	False	NA	NA	False	AATAAA	-15	NA	78005289	78009903	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_78005300_78009900
ES.9656.22	chr13	+	4827	1	Intergenic	novelGene_8065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTGCCTATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	78006151	78010978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_78006200_78011000
ES.9656.23	chr13	+	159	1	Intergenic	novelGene_8067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	78140511	78140670	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_78140500_78140700
ES.9656.24	chr13	+	5267	1	Intergenic	novelGene_8068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAATGTTTTAGCCTA	6023	False	NA	NA	False	ATTAAA	-13	NA	78208671	78213938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_78208700_78213900
ES.9656.3	chr13	+	3957	11	NNC	ENSMUSG00000064138.15	novel	1904	11	NA	NA	5	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	42.4023584249744	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTCTTCTGTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	77856817	78314357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78214177_78214249_78311631
ES.9656.4	chr13	+	1882	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	13	1997	-7	13	multi-exon	FALSE	canonical	3	89	junction_7	8.92907582349531	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACATGAAGTACCGAAT	NA	False	NA	NA	False	NA	NA	NA	77856821	78312357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.5	chr13	+	3763	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	-6	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	34.765059686415	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	77856822	78314359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78147704_78147822_78154506_78154592_78311631
ES.9656.6	chr13	+	3798	10	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	-3	3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	34.3104922223976	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTCTTCTGTCTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	77856825	78314357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982741_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.7	chr13	+	7060	3	ISM	ENSMUSG00000064138.15	ENSMUST00000224888.2	3876	6	-22	71873	-3	6557	5prime_fragment	FALSE	canonical	3	98	junction_2	9	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGTAAGACACTGATT	NA	False	NA	NA	False	NA	NA	NA	77856825	77916767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_77856973_77907546_77907649_77909956
ES.9656.8	chr13	+	3677	8	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	-3	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.0823683280387	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTTCTGTCTTCCTC	NA	False	NA	NA	False	AATAAA	-18	NA	77856825	78314359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_77856973_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9656.9	chr13	+	3846	10	NNC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	1	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.0243195521623	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAACTGTGTCTTC	NA	False	NA	NA	False	AATAAA	-8	NA	77856836	78314349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050982_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ES.9657.1	chr13	-	3933	1	Intergenic	novelGene_8066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAATACCAATACTACTC	NA	False	NA	NA	False	NA	NA	NA	78070483	78066550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_78066600_78070500
ES.9658.1	chr13	+	5461	2	FSM	ENSMUSG00000087143.10	ENSMUST00000134705.2	475	2	192	-5178	-42	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGGTCGTGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	78350863	78384683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_78350978_78379336
ES.9659.1	chr13	-	167	1	Intergenic	novelGene_8069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAAAGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	78634737	78634570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_78634600_78634700
ES.966.1	chr1	-	176	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATAGAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	87967701	87967525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_87967500_87967700
ES.9660.1	chr13	-	195	1	Intergenic	novelGene_8070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGCCACTGTTTATTGA	NA	False	NA	NA	False	NA	NA	NA	79466823	79466628	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_79466600_79466800
ES.9661.1	chr13	+	5124	1	Intergenic	novelGene_8071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	80849068	80854192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_80849100_80854200
ES.9661.2	chr13	+	3346	2	Intergenic	novelGene_8072	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	90	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	80849160	80854192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_80849433_80851118
ES.9662.1	chr13	-	2405	3	Intergenic	novelGene_8073	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAATGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	80990505	80978774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_80980069_80980116_80980979_80990256
ES.9663.1	chr13	+	4255	8	FSM	ENSMUSG00000074794.11	ENSMUST00000159690.8	4132	8	-117	-6	-91	-1	multi-exon	TRUE	canonical	2	5	junction_6	68.2094613103263	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGCAGTTTATTTG	NA	False	NA	29	True	AATAAA	-29	NA	81031411	81044160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039568_81039762_81041488
ES.9663.10	chr13	+	3945	8	FSM	ENSMUSG00000074794.11	ENSMUST00000161441.2	1908	8	-318	-1719	-318	-3	multi-exon	FALSE	canonical	0	0	junction_1	68.1834260787527	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81033895	81044158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81034263_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.11	chr13	+	3778	7	NIC	ENSMUSG00000074794.11	novel	1908	8	NA	NA	-310	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	92.1618443584738	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGTATAATTGTTT	NA	False	NA	16	True	AATAAA	-16	NA	81033903	81044147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81034263_81035524_81035607_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.12	chr13	+	3639	8	NIC	ENSMUSG00000074794.11	novel	1908	8	NA	NA	15	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	85.4830213479584	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGTATAATTGTTT	NA	False	NA	16	True	AATAAA	-16	NA	81034228	81044147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81034263_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039568_81039762_81041488
ES.9663.13	chr13	+	4672	8	NNC	ENSMUSG00000074794.11	novel	591	3	NA	NA	81	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.8395465907066	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGGCAGTTTATTT	NA	False	NA	28	True	AATAAA	-28	NA	81034294	81044159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81035388_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.14	chr13	+	4225	8	NNC	ENSMUSG00000074794.11	novel	591	3	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	68.1834260787527	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCAGTTTATTTGA	NA	False	NA	30	True	AATAAA	-30	NA	81034296	81044161	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81034941_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.15	chr13	+	4270	8	NNC	ENSMUSG00000074794.11	novel	591	3	NA	NA	107	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.8395465907066	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81034320	81044158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81035013_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.16	chr13	+	3626	8	NNC	ENSMUSG00000074794.11	novel	591	3	NA	NA	186	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	68.1834260787527	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGGCAGTTTATTT	NA	False	NA	28	True	AATAAA	-28	NA	81034399	81044159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81034447_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.17	chr13	+	3569	7	ISM	ENSMUSG00000074794.11	ENSMUST00000161441.2	1908	8	1309	-1708	1309	-7	3prime_fragment	FALSE	canonical	3	173	junction_4	13.5984067694222	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGTATAATTGTTT	NA	False	NA	16	True	AATAAA	-16	NA	81035522	81044147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.18	chr13	+	2983	2	NIC	ENSMUSG00000074794.11	novel	4132	8	NA	NA	664	-144	intron_retention	FALSE	canonical	3	205	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTATGGCTGTTGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	81039300	81044010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81039762_81041488
ES.9663.2	chr13	+	4288	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	-106	-81	-80	81	multi-exon	FALSE	canonical	3	173	junction_5	15.8461995701281	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTCTGAGTGCTTTG	NA	False	NA	111	True	NA	NA	NA	81031422	81044242	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.3	chr13	+	4049	7	NIC	ENSMUSG00000074794.11	novel	4101	8	NA	NA	-74	3	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	74.3721871550261	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTTGGCAGTTTAT	NA	False	NA	26	True	AATAAA	-26	NA	81031428	81044157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81032049_81035524_81035607_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.5	chr13	+	4140	8	NNC	ENSMUSG00000074794.11	novel	4132	8	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	69.9130655506814	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATTGTTTGGCAGTTT	NA	False	NA	24	True	AATAAA	-24	NA	81031528	81044155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039561_81039762_81041488
ES.9663.6	chr13	+	3949	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	3	149	3	-142	multi-exon	FALSE	canonical	3	173	junction_5	15.8461995701281	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGGCTGTTGTAATC	NA	False	NA	NA	False	ATTAAA	-20	NA	81031531	81044012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.8	chr13	+	4430	7	NIC	ENSMUSG00000074794.11	novel	4101	8	NA	NA	3	-3	intron_retention	FALSE	canonical	3	173	junction_4	16.1932770686548	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTGGCAGTTTATT	NA	False	NA	27	True	AATAAA	-27	NA	81031531	81044158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038910_81039180_81039344_81039606_81039762_81041488
ES.9663.9	chr13	+	5936	5	NIC	ENSMUSG00000074794.11	novel	4132	8	NA	NA	3	3	intron_retention	FALSE	canonical	3	5	junction_2	86.1289004922273	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTTGGCAGTTTAT	NA	False	NA	26	True	AATAAA	-26	NA	81031531	81044157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81032049_81035524_81035607_81038214_81038318_81038652_81038910_81039180
ES.9664.1	chr13	+	95	1	Intergenic	novelGene_8074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACTGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	81214521	81214616	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81214500_81214600
ES.9665.1	chr13	+	175	1	Intergenic	novelGene_8075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATATTTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	81615487	81615662	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81615500_81615700
ES.9666.1	chr13	-	11158	57	ISM	ENSMUSG00000069170.15	ENSMUST00000095585.11	19338	90	115113	0	15340	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.0435357381205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTAGCATCCAGCCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	81666160	81243186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_81243621_81251337_81251516_81255021_81255211_81303273_81303396_81330764_81330923_81418862_81419042_81431474_81431592_81522300_81522402_81530338_81530500_81534006_81534147_81534830_81535081_81539734_81539920_81545285_81545694_81553282_81553526_81561165_81561338_81562692_81562811_81567114_81568218_81570247_81570384_81572341_81572517_81575721_81575866_81581543_81582018_81583678_81583829_81585587_81585825_81587531_81587752_81588166_81588363_81590584_81590734_81592464_81592698_81592968_81593155_81593331_81593471_81594497_81594619_81596953_81597072_81607794_81607960_81614280_81614461_81620514_81620698_81621001_81621179_81623050_81623254_81624599_81624856_81627747_81627895_81629431_81629637_81629967_81630191_81635970_81636094_81637025_81637291_81640575_81640684_81640992_81641140_81641233_81641392_81642692_81642818_81644310_81644487_81647103_81647367_81651121_81651264_81651972_81652112_81652210_81652290_81654217_81654312_81656774_81656939_81657484_81657665_81658968_81659069_81659613_81659745_81666071
ES.9666.2	chr13	-	4412	19	NNC	ENSMUSG00000069170.15	novel	6590	28	NA	NA	21778	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.08297714942322	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGTAGCATCCAGCC	NA	False	NA	NA	False	AATAAA	-12	NA	81570845	81243189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81243621_81251337_81251516_81255021_81255211_81303273_81303396_81330764_81330923_81418862_81419042_81431474_81431592_81522300_81522402_81530338_81530500_81534006_81534147_81534830_81535081_81539734_81539920_81545285_81545694_81553282_81553526_81561165_81561338_81562692_81562811_81567114_81568218_81570247_81570384_81570824
ES.9666.3	chr13	-	3404	10	NIC	ENSMUSG00000069170.15	novel	6590	28	NA	NA	8809	114362	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTTTATTTAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	81583814	81539488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_81539920_81545285_81545694_81553282_81553526_81561165_81561338_81562692_81562811_81567114_81568218_81572341_81572517_81575721_81575866_81581543_81582018_81583678
ES.9667.1	chr13	+	159	1	Intergenic	novelGene_8076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81705692	81705851	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81705700_81705900
ES.9668.1	chr13	-	3532	11	NNC	ENSMUSG00000069170.15	novel	3823	19	NA	NA	-2432	11882	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.91049731745428	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAGTTGAAAATGATA	1661	False	NA	NA	False	AATAAA	-18	NA	81709663	81677756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81678965_81679685_81679826_81681129_81681211_81684428_81684559_81688077_81688281_81691487_81691669_81692586_81692764_81705068_81705443_81707038_81707771_81708768_81708984_81709572
ES.9669.1	chr13	-	2447	11	ISM	ENSMUSG00000069170.15	ENSMUST00000126444.8	3823	19	-37	12587	-22	4277	5prime_fragment	FALSE	canonical	1	2	junction_1	15.4220621189256	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTCGGGCATTTTTG	2335	False	NA	NA	False	AATAAA	-20	NA	81781295	81721277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_81721558_81723077_81723255_81726181_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
ES.9669.2	chr13	-	3013	11	NNC	ENSMUSG00000069170.15	novel	2580	9	NA	NA	-19371	23	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.8458196379992	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATTTCTACTGTGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	81752346	81725531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81746239_81746432_81747139_81747292_81752147
ES.9669.3	chr13	-	1618	7	FSM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	-26	0	-13	0	multi-exon	FALSE	canonical	3	24	junction_1	8.51958527942137	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAAAGTGTATATGA	2344	False	NA	NA	False	AATAAA	-18	NA	81781286	81727159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
ES.9669.4	chr13	-	1118	6	ISM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	-21	2336	-8	-36	5prime_fragment	FALSE	canonical	3	24	junction_1	7.78716893357271	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATCTGCTTATTATTTT	2349	False	NA	NA	False	TATAAA	-15	NA	81781281	81729495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
ES.967.1	chr1	-	1012	1	FSM	ENSMUSG00000081984.4	ENSMUST00000119972.4	1051	1	39	0	39	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCACTGTTATGTTCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	88133465	88132453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88132500_88133500
ES.9670.1	chr13	+	4741	1	Intergenic	novelGene_8080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAACGGTCTGAGAAAAT	585	False	NA	NA	False	NA	NA	NA	81784759	81789500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81784800_81789500
ES.9671.1	chr13	-	640	3	Intergenic	novelGene_8077	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	28.5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTGTACTTGTGAACTG	NA	False	NA	-2	True	NA	NA	NA	81792381	81784031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_81784533_81785816_81785901_81792326
ES.9671.2	chr13	-	3843	1	Intergenic	novelGene_8078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGCTTGTACTTGTGAA	NA	False	NA	-5	True	NA	NA	NA	81787877	81784034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_81784000_81787900
ES.9671.3	chr13	-	754	3	Intergenic	novelGene_8079	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGCTTGTACTTGTGA	NA	False	NA	-6	True	NA	NA	NA	81792400	81784035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_81784533_81785816_81786000_81792326
ES.9672.1	chr13	+	4269	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	-19	0	-19	0	multi-exon	FALSE	canonical	3	66	junction_2	12	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	270	False	NA	27	True	AATAAA	-29	NA	81805762	81820990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817279
ES.9672.10	chr13	+	4301	4	NNC	ENSMUSG00000035840.8	novel	4250	3	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.4264068711929	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGGAAGTTGTTG	425	False	NA	19	True	AATAAA	-21	NA	81805917	81820982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81806056_81813123_81813389_81816709_81816905_81817279
ES.9672.11	chr13	+	1462	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	137	2651	8	333	multi-exon	FALSE	canonical	3	66	junction_2	12	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATATTAATTATAAAA	426	False	NA	NA	False	AAGAAA	-21	NA	81805918	81818339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817279
ES.9672.12	chr13	+	2421	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	137	1692	8	-5	multi-exon	FALSE	canonical	3	66	junction_2	12	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCACATTACCTC	426	False	NA	NA	False	AATAAA	-12	NA	81805918	81819298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817279
ES.9672.3	chr13	+	2494	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-161	5	5	-5	multi-exon	FALSE	canonical	2	14	junction_2	38	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGTCACATTACCTC	294	False	NA	NA	False	AATAAA	-12	NA	81805786	81819298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817338
ES.9672.4	chr13	+	4180	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-155	-1687	11	0	multi-exon	FALSE	canonical	2	14	junction_2	38	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	300	False	NA	27	True	AATAAA	-29	NA	81805792	81820990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817338
ES.9672.5	chr13	+	3955	3	NIC	ENSMUSG00000035840.8	novel	4250	3	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	45	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	381	False	NA	27	True	AATAAA	-29	NA	81805873	81820990	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81806056_81813123_81813389_81817482
ES.9672.7	chr13	+	2817	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-60	-419	-23	419	multi-exon	FALSE	canonical	2	14	junction_2	38	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGATTTCAGGGCAGAAC	395	False	NA	NA	False	AGTAAA	-13	NA	81805887	81819722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817338
ES.9672.8	chr13	+	4085	3	NNC	ENSMUSG00000035840.8	novel	4250	3	NA	NA	-23	-8	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGGAAGTTGTTG	395	False	NA	19	True	AATAAA	-21	NA	81805887	81820982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81806005_81813123_81813389_81817279
ES.9672.9	chr13	+	3428	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	136	686	7	-686	multi-exon	FALSE	canonical	3	66	junction_2	12	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAATCGTGACTTTGTGA	425	False	NA	NA	False	AATAAA	-24	NA	81805917	81820304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81806056_81813123_81813389_81817279
ES.9673.1	chr13	+	216	1	Intergenic	novelGene_8082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCCACAATACTCATAT	NA	False	NA	NA	False	NA	NA	NA	81843287	81843503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81843300_81843500
ES.9674.1	chr13	+	2515	1	Intergenic	novelGene_8083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACTAGATTCCATTGTT	NA	False	NA	NA	False	NA	NA	NA	81848311	81850826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81848300_81850800
ES.9675.1	chr13	+	4238	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-281	0	-281	0	multi-exon	FALSE	canonical	3	18	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGCTTTTTATAGAACA	NA	False	NA	NA	False	ATTAAA	-25	NA	81859178	81901394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81860102_81898079
ES.9675.2	chr13	+	1450	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	-248	2755	-248	174	multi-exon	FALSE	canonical	3	18	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCCAGAGTCTTAGCT	NA	False	NA	NA	False	NA	NA	NA	81859211	81898639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81860102_81898079
ES.9675.3	chr13	+	1392	1	Genic_Genomic	ENSMUSG00000051098.7	novel	NA	NA	NA	NA	-237	-37851	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	81859222	81860614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_81859200_81860600
ES.9675.4	chr13	+	3223	1	Antisense	novelGene_ENSMUSG00000114905.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGGAAAAAAATTTGA	NA	False	NA	NA	False	NA	NA	NA	81872496	81875719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_81872500_81875700
ES.9675.5	chr13	+	4363	1	Intergenic	novelGene_8084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	81873966	81878329	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81874000_81878300
ES.9675.6	chr13	+	175	1	Intergenic	novelGene_8085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAACTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	81895258	81895433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_81895300_81895400
ES.9676.1	chr13	-	5409	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	2	-2357	2	2357	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGTATGTGAAAAAATTA	NA	False	NA	NA	False	ATTAAA	-24	NA	81859130	81819604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.10	chr13	-	2947	7	NIC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	99.8432104184689	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859085	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81842766_81842897_81847862_81848013_81858976
ES.9676.11	chr13	-	3187	6	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	108.171345558794	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859426	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81824242_81826234_81826379_81830230_81830264_81842766_81842897_81847862_81848013_81858976
ES.9676.12	chr13	-	2992	8	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.8082472452315	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859076	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81824236_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.14	chr13	-	3478	9	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-321	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.61703081767	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859453	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81824242_81826234_81826379_81830230_81830314_81834476_81834580_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.15	chr13	-	2495	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	46	513	-11	-476	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGATACCGGGGCCAA	NA	False	NA	NA	False	AATAAA	-18	NA	81859086	81822474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.16	chr13	-	2047	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	-331	1338	-331	-1301	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCATTTTGGAATTAT	NA	False	NA	NA	False	CATAAA	-33	NA	81859463	81823299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.17	chr13	-	1286	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	15	1753	4	-1716	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGAGTTCCTAACAGT	NA	False	NA	NA	False	CATAAA	-15	NA	81859117	81823714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.18	chr13	-	2799	5	ISM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	13	11018	2	8985	5prime_fragment	FALSE	canonical	3	275	junction_1	7.29297607290741	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGAGAAAATGAGTTTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	81859119	81832979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.19	chr13	-	1115	5	ISM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	3	12712	3	7291	5prime_fragment	FALSE	canonical	3	275	junction_1	7.29297607290741	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATGGTTATTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	81859129	81834673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.2	chr13	-	4959	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	25	-1930	14	1930	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATGCTTAATTTTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	81859107	81820031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.20	chr13	-	207	1	Intergenic	novelGene_8081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATCTTTGTAGGTA	NA	False	NA	NA	False	AATATA	-9	NA	81836495	81836288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_81836300_81836500
ES.9676.21	chr13	-	5336	1	Genic_Genomic	ENSMUSG00000035834.12	novel	NA	NA	NA	NA	-7361	4535	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCTTAAGTTTTTGTG	NA	False	NA	NA	False	NA	NA	NA	81842765	81837429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_81837400_81842800
ES.9676.22	chr13	-	1757	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	-397	-627	-329	190	multi-exon	FALSE	canonical	3	281	junction_2	6.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAATACTCATTTTTATT	NA	False	NA	NA	False	AATAAA	-21	NA	81859461	81841774	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81842897_81847862_81848013_81858976
ES.9676.23	chr13	-	756	3	FSM	ENSMUSG00000035834.12	ENSMUST00000161920.2	733	3	-30	7	-19	-7	multi-exon	FALSE	canonical	3	281	junction_2	6.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTATGCAATGCTGTGA	NA	False	NA	NA	False	NA	NA	NA	81859094	81842408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81842897_81847862_81848013_81858976
ES.9676.24	chr13	-	3656	1	NIC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	4	-7962	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTGTTGTATATACGGG	NA	False	NA	NA	False	AAAAAG	-9	NA	81859117	81855461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_81855500_81859100
ES.9676.3	chr13	-	4007	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	48	-1001	-9	1001	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATACTTTGCATATCCT	NA	False	NA	NA	False	AATAAA	-11	NA	81859084	81820960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.4	chr13	-	3373	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	-315	-4	-315	4	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGCAGTGAACATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	81859447	81821957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.5	chr13	-	7983	7	NIC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-5	4	intron_retention	FALSE	canonical	3	220	junction_2	24.9977776790036	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGCAGTGAACATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	81859126	81821957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_81824242_81826234_81826379_81830230_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ES.9676.6	chr13	-	3332	8	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-822	2	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_7	90.6088250871485	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTTGCAGTGAACATT	NA	False	NA	-4	True	AATAAA	-20	NA	81859954	81821959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81859522
ES.9676.8	chr13	-	3568	4	NNC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	2822	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	113.440145745087	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81832582	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_81824242_81826234_81826379_81830230_81830383_81831590
ES.9676.9	chr13	-	2913	7	NIC	ENSMUSG00000035834.12	novel	3054	8	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	97.8583159470875	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859141	81821961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81858976
ES.9677.1	chr13	+	818	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	170	238	-31	1	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTGGTGTATGTTAT	NA	False	NA	22	True	TATAAA	-15	NA	81931365	81945036	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.10	chr13	+	899	5	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-8	112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	588.86814101291	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATGTTAATGTTTGGT	NA	False	NA	2	True	AATAAA	-13	NA	81931388	81945147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81931477_81932766_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.11	chr13	+	814	6	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	654.993435081605	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGTGGTGTATGTTA	NA	False	NA	21	True	TATAAA	-14	NA	81931396	81945035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944268_81944297_81944772
ES.9677.12	chr13	+	819	5	NIC	ENSMUSG00000021537.10	novel	598	5	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	582.813166889699	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGTGGTGTATGTTA	NA	False	NA	21	True	TATAAA	-14	NA	81931869	81945035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81931983_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.13	chr13	+	805	5	NNC	ENSMUSG00000021537.10	novel	697	3	NA	NA	-23	-2	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	572.001092656299	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCATGTGGTGTATGT	NA	False	NA	19	True	TATAAA	-12	NA	81931926	81945033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81932028_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.14	chr13	+	6135	3	FSM	ENSMUSG00000021537.10	ENSMUST00000224705.2	769	3	-872	-4494	4	117	multi-exon	FALSE	canonical	3	1314	junction_1	39.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATGTTTGGTAAATT	NA	False	NA	7	True	AATAAA	-18	NA	81931953	81945152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81932896_81934961_81935077_81940074
ES.9677.15	chr13	+	996	5	NNC	ENSMUSG00000021537.10	novel	697	3	NA	NA	5	-22	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	572.001092656299	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATCAGAAAAACCA	NA	False	NA	107	True	AATAGA	-45	NA	81931954	81945252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_81932028_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.2	chr13	+	1034	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	170	22	-31	-22	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATCAGAAAAACCA	NA	False	NA	107	True	AATAGA	-45	NA	81931365	81945252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ES.9677.4	chr13	+	1169	6	NIC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-30	117	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	645.774263965358	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATGTTTGGTAAATT	NA	False	NA	7	True	AATAAA	-18	NA	81931366	81945152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81931477_81932759_81932896_81934961_81935077_81938289_81938526_81940074_81940267_81944772
ES.9677.5	chr13	+	5322	4	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	174	236	-27	3	intron_retention	FALSE	canonical	3	1314	junction_2	35.311313893551	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931369	81945038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074
ES.9677.6	chr13	+	4499	5	NIC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-20	3	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	580.754035715638	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTGTATGTTATTT	NA	False	NA	24	True	TATAAA	-17	NA	81931376	81945038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81941082
ES.9677.7	chr13	+	5540	5	NIC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	-12	0	intron_retention	FALSE	canonical	1	2	junction_3	650.600107592982	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGTGGTGTATGTTA	NA	False	NA	21	True	TATAAA	-14	NA	81931384	81945035	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_81931477_81932759_81932896_81934961_81935077_81938289_81938526_81940074
ES.9677.8	chr13	+	5520	4	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	190	22	-11	-22	intron_retention	FALSE	canonical	3	1314	junction_2	35.311313893551	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATCAGAAAAACCA	NA	False	NA	107	True	AATAGA	-45	NA	81931385	81945252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074
ES.9678.1	chr13	-	179	1	Intergenic	novelGene_8086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGAATGGCATGTT	NA	False	NA	NA	False	NA	NA	NA	81954913	81954734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_81954700_81954900
ES.9679.1	chr13	-	178	1	Intergenic	novelGene_8087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	82545280	82545102	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_82545100_82545300
ES.968.1	chr1	+	5628	9	Antisense	novelGene_ENSMUSG00000044783.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	22.488886144049	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGAGCACTTCCGGTGGA	6079	False	NA	NA	False	NA	NA	NA	88192710	88205327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_88193998_88194045_88194385_88195672_88195746_88197037_88197136_88197923_88198037_88199162_88199974_88200213_88202819_88204939_88205005_88205090
ES.968.2	chr1	+	1992	1	Antisense	novelGene_ENSMUSG00000044783.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	88199021	88201013	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_+_88199000_88201000
ES.9680.1	chr13	+	222	1	Intergenic	novelGene_8088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATCTCCAGGAATC	NA	False	NA	NA	False	NA	NA	NA	83064774	83064996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_83064800_83065000
ES.9681.1	chr13	+	2712	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	-30	175	-26	96	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTGCCTTTTATT	NA	False	NA	117	True	ATTAAA	-15	NA	84370388	84444085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.11	chr13	+	2614	11	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	-2	-129	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.7933840963079	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTAAATCCAGGTTCCT	NA	False	NA	NA	False	NA	NA	NA	84370428	84444131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.12	chr13	+	2996	13	NNC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	88.6711699984211	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370428	84443989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430633_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84435009_84435174_84440497_84440673_84441499_84441597_84442721
ES.9681.13	chr13	+	2497	11	NNC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	85.7800093261828	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370447	84443985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431476_84432107_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.14	chr13	+	3069	10	NIC	ENSMUSG00000035762.12	novel	2414	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	74.0735370350903	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370447	84443985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.15	chr13	+	3640	10	NIC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	82.2070556582584	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370447	84443989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.17	chr13	+	2806	12	NNC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	80.4627114499897	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84370452	84443987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430633_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.18	chr13	+	2442	11	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	84.5	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370456	84443985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430870_84430982_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.19	chr13	+	13385	10	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	10	95	intron_retention	FALSE	canonical	0	0	junction_7	76.9574196841633	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTTTGCCTTTTAT	NA	False	NA	116	True	ATTAAA	-14	NA	84370457	84444084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84431484_84432103_84432245_84434803_84434918_84440578_84440673_84441499_84441597_84442721
ES.9681.20	chr13	+	2504	12	NNC	ENSMUSG00000035762.12	novel	2632	12	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.4470560231391	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAGTGTAATTTATTT	NA	False	NA	18	True	ATTAAA	-19	NA	84370462	84443986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430887_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.22	chr13	+	1095	1	Intergenic	novelGene_8089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	84378347	84379442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_84378300_84379400
ES.9681.23	chr13	+	8298	6	NIC	ENSMUSG00000035762.12	novel	2414	11	NA	NA	25591	0	intron_retention	FALSE	canonical	0	0	junction_4	80.4223849434969	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84424980	84443989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.24	chr13	+	5433	7	ISM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	57056	-100	28111	96	3prime_fragment	FALSE	canonical	0	0	junction_5	74.2173983795055	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTGCCTTTTATT	NA	False	NA	117	True	ATTAAA	-15	NA	84427500	84444085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.25	chr13	+	5034	7	ISM	ENSMUSG00000035762.12	ENSMUST00000223827.2	2632	12	57429	2	28472	2	3prime_fragment	FALSE	canonical	0	0	junction_5	88.5525581536499	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84427861	84443987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.26	chr13	+	3287	3	ISM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	68306	-4	39361	0	3prime_fragment	FALSE	canonical	0	0	junction_1	106.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84438750	84443989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_84440673_84441499_84441597_84442721
ES.9681.3	chr13	+	2450	11	FSM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	-34	-2	-4	2	multi-exon	FALSE	canonical	0	0	junction_9	81.3373223065525	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84370410	84443987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.4	chr13	+	7719	5	ISM	ENSMUSG00000035762.12	ENSMUST00000223862.2	2561	11	-20	16398	-4	-4561	5prime_fragment	FALSE	canonical	3	163	junction_3	11.1803398874989	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTTAAGTTTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	84370410	84427579	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289
ES.9681.5	chr13	+	2747	12	FSM	ENSMUSG00000035762.12	ENSMUST00000223827.2	2632	12	-19	-96	-1	96	multi-exon	FALSE	canonical	0	0	junction_10	68.3415099589633	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTGCCTTTTATT	NA	False	NA	117	True	ATTAAA	-15	NA	84370413	84444085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.6	chr13	+	2544	12	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	71.3748109374984	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370415	84443985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430870_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.7	chr13	+	8997	11	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	95	intron_retention	FALSE	non_canonical	0	0	junction_9	70.5002836873725	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTTTGCCTTTTAT	NA	False	NA	116	True	ATTAAA	-14	NA	84370418	84444084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84435877_84435929_84441597_84442721
ES.9681.8	chr13	+	2478	11	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	2	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.7933840963079	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84370420	84443987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9681.9	chr13	+	3642	10	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	3	2	intron_retention	FALSE	canonical	0	0	junction_8	61.5258652825414	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGAGTGTAATTTATTTG	NA	False	NA	19	True	ATTAAA	-20	NA	84370421	84443987	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ES.9682.1	chr13	-	461	1	Intergenic	novelGene_8090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATGTATGGACAGAG	NA	False	NA	NA	False	AAAAAG	-42	NA	84392663	84392202	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_84392200_84392700
ES.9683.1	chr13	-	1312	1	Antisense	novelGene_ENSMUSG00000035762.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAACCAAAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	84422628	84421316	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_84421300_84422600
ES.9684.1	chr13	-	4091	3	Antisense	novelGene_ENSMUSG00000035762.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACGTGGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	84437607	84433319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_84435769_84435854_84436620_84436730
ES.9685.1	chr13	-	1703	1	Intergenic	novelGene_8091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGGAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	84440083	84438380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_84438400_84440100
ES.9686.1	chr13	+	7521	1	Intergenic	novelGene_8092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTACAGTAATGTCC	NA	False	NA	NA	False	NA	NA	NA	84449243	84456764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_84449200_84456800
ES.9686.2	chr13	+	4292	1	Intergenic	novelGene_8093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCACATTCTTCACCAA	NA	False	NA	NA	False	NA	NA	NA	84452233	84456525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_84452200_84456500
ES.9687.1	chr13	-	155	1	Intergenic	novelGene_8094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	84523729	84523574	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_84523600_84523700
ES.9688.1	chr13	+	137	1	Intergenic	novelGene_8095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	85269507	85269644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_85269500_85269600
ES.9689.1	chr13	+	1249	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	-18	814	-18	-1	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTTGTGATTGTTTT	NA	False	NA	14	True	ATTAAA	-21	NA	85337508	85361028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.10	chr13	+	4987	8	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	824	junction_5	87.3725310591004	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337548	85361842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85360034_85360858
ES.9689.11	chr13	+	918	7	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	342.421118248017	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATTTTCTTTGTGATT	NA	False	NA	9	True	ATTAAA	-16	NA	85337549	85361023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.13	chr13	+	1901	9	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	323.735134793862	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337549	85361019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85338474_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.14	chr13	+	3367	5	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	-8	7533	5	2665	5prime_fragment	FALSE	canonical	3	865	junction_4	81.8993284465752	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATGATTTAAAAATGAAAG	NA	False	NA	NA	False	NA	NA	NA	85337558	85353197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451
ES.9689.16	chr13	+	1326	10	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	446.072019873002	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTCTTTGTGATTG	NA	False	NA	10	True	ATTAAA	-17	NA	85337563	85361024	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85349429_85349569_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360861
ES.9689.17	chr13	+	4319	9	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-3	-5	intron_retention	FALSE	non_canonical	0	0	junction_5	424.049451715245	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337563	85361019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85351274_85351445_85354246_85354318_85356896_85360034_85360858
ES.9689.2	chr13	+	4831	4	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	-40	10872	0	-674	5prime_fragment	FALSE	canonical	3	943	junction_1	54.4324249771117	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAGGAAAGGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	85337526	85349858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469
ES.9689.20	chr13	+	980	8	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-2	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	340.707427304437	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCTTTGTGATTGTT	NA	False	NA	12	True	ATTAAA	-19	NA	85337564	85361026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.21	chr13	+	4713	8	NIC	ENSMUSG00000021548.11	novel	1055	9	NA	NA	-2	1	intron_retention	FALSE	canonical	3	111	junction_4	312.531010706236	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTCTTTGTGATTGT	NA	False	NA	11	True	ATTAAA	-18	NA	85337564	85361025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.22	chr13	+	4134	8	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	12	-5	intron_retention	FALSE	canonical	3	824	junction_5	87.3725310591004	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337578	85361019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85360034_85360858
ES.9689.23	chr13	+	1016	9	NNC	ENSMUSG00000021548.11	novel	1055	9	NA	NA	14	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	394.200912448208	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCTTTGTGATTGTT	NA	False	NA	12	True	ATTAAA	-19	NA	85337580	85361026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345520_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.25	chr13	+	5782	3	ISM	ENSMUSG00000021548.11	ENSMUST00000165077.8	527	5	47	674	5	-674	intron_retention	FALSE	canonical	3	943	junction_1	60.5	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAAGGAAAGGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	85337600	85349858	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_85337772_85338872_85338996_85344370
ES.9689.26	chr13	+	1121	9	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	32	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	318.014912189664	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCTTTGTGATTGTT	NA	False	NA	12	True	ATTAAA	-19	NA	85337627	85361026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85337772_85338872_85338996_85344377_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.3	chr13	+	1860	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337531	85361842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.4	chr13	+	1034	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	8	-5	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATATATTTTCTTTGT	NA	False	NA	5	True	ATTAAA	-12	NA	85337534	85361019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.5	chr13	+	2037	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	8	0	8	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337534	85361842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.6	chr13	+	1113	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	-61	3	8	2	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTCTTTGTGATTGTT	NA	False	NA	12	True	ATTAAA	-19	NA	85337534	85361026	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.9689.8	chr13	+	2167	10	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	401.984183707042	257	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337543	85361842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85349429_85349569_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ES.969.1	chr1	-	8474	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	19	-3615	19	3615	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTCTTTACTCTCT	8610	False	NA	NA	False	NA	NA	NA	88205336	88186577	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.10	chr1	-	4758	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGGTGCAGGTTTGGC	8632	False	NA	NA	False	AATAAA	-24	NA	88205314	88190192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.11	chr1	-	4739	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	136	3	9	-3	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGAGGGTGCAGGTTT	8727	False	NA	NA	False	AATAAA	-21	NA	88205219	88190195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.12	chr1	-	6425	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-624	intron_retention	FALSE	non_canonical	3	150	junction_1	89.5890846120924	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGACCTGTTTGTCTTCTC	8645	False	NA	-1	True	AATAAA	-37	NA	88205301	88190816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88202820_88204940_88205008_88205095
ES.969.13	chr1	-	4193	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-24	-630	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCGGACCTGTTTGT	8567	False	NA	-7	True	AATAAA	-31	NA	88205379	88190822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.14	chr1	-	6493	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-26	-633	intron_retention	FALSE	canonical	3	259	junction_6	62.6296433186572	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCCTGCGGACCTGTT	8619	False	NA	-10	True	AATAAA	-28	NA	88205327	88190825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88202820_88204940_88205008_88205095
ES.969.15	chr1	-	4161	10	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	21	-634	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	153.051028366198	740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCCCTGCGGACCTGT	8688	False	NA	-11	True	AATAAA	-27	NA	88205258	88190826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88201789_88201855_88202763_88202820_88204940_88205008_88205095
ES.969.16	chr1	-	4253	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	-9	634	-9	-634	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCCCTGCGGACCTGT	8582	False	NA	-11	True	AATAAA	-27	NA	88205364	88190826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.17	chr1	-	4214	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-23	-636	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTCTGCCCTGCGGACCT	8568	False	NA	-13	True	AATAAA	-25	NA	88205378	88190828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.18	chr1	-	4286	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-26	-636	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	134.076128237898	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTCTGCCCTGCGGACCT	8619	False	NA	-13	True	AATAAA	-25	NA	88205327	88190828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198094_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.19	chr1	-	7424	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-20	-637	intron_retention	FALSE	canonical	3	259	junction_5	43.5495120523755	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGTCTGCCCTGCGGACC	8625	False	NA	-14	True	AATAAA	-24	NA	88205321	88190829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.2	chr1	-	4020	1	Genic_Genomic	ENSMUSG00000044783.17	novel	NA	NA	NA	NA	6286	3384	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCACCTGGCTGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	88190828	88186808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_-_88186800_88190800
ES.969.20	chr1	-	7468	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-22	-638	intron_retention	FALSE	non_canonical	0	0	junction_3	159.329497861786	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8623	False	NA	-15	True	AATAAA	-23	NA	88205323	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88197042_88197136_88197923_88198039_88199164_88199974_88200213_88202820_88204940_88205008_88205095
ES.969.22	chr1	-	5017	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	11	-638	intron_retention	FALSE	canonical	3	259	junction_6	42.1772055341113	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8602	False	NA	-15	True	AATAAA	-23	NA	88205344	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.23	chr1	-	8760	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	58	-638	intron_retention	FALSE	canonical	3	259	junction_5	64.2401743459652	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8776	False	NA	-15	True	AATAAA	-23	NA	88205170	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88202820_88204940_88205008_88205095
ES.969.24	chr1	-	4199	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-75	-638	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	157.591116500899	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8516	False	NA	-15	True	AATAAA	-23	NA	88205430	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88202763_88202820_88204940_88205008_88205095
ES.969.25	chr1	-	5135	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-26	-638	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_6	133.258618389206	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8619	False	NA	-15	True	AATAAA	-23	NA	88205327	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88201789_88202820_88204940_88205008_88205095
ES.969.27	chr1	-	4075	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	15	-638	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	143.369652098543	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8682	False	NA	-15	True	AATAAA	-23	NA	88205264	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88202749_88202820_88204940_88205008_88205095
ES.969.28	chr1	-	10450	6	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-16	-638	intron_retention	FALSE	non_canonical	0	0	junction_3	155.589973970047	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8629	False	NA	-15	True	AATAAA	-23	NA	88205317	88190830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88198039_88199164_88199974_88200213_88205008_88205095
ES.969.29	chr1	-	4119	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	21	-640	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	127.053029173736	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8612	False	NA	-17	True	AATAAA	-21	NA	88205334	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.3	chr1	-	5155	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-14	368	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGAGTAGGCATGACC	8631	False	NA	NA	False	NA	NA	NA	88205315	88189824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.31	chr1	-	5509	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-1570	-640	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	178.765494547511	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	3349	False	NA	-17	True	AATAAA	-21	NA	88202411	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198039_88199164_88199974_88200213_88200959_88202240
ES.969.32	chr1	-	4103	4	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-591	-640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.844564519241	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	6500	False	NA	-17	True	AATAAA	-21	NA	88199260	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88198877
ES.969.33	chr1	-	4134	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	11	-640	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	158.219341421964	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8602	False	NA	-17	True	AATAAA	-21	NA	88205344	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88204940_88205008_88205095
ES.969.34	chr1	-	4335	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	17	-640	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	155.65807881379	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8608	False	NA	-17	True	AATAAA	-21	NA	88205338	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.35	chr1	-	5320	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	24	-640	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	157.125696100288	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8691	False	NA	-17	True	AATAAA	-21	NA	88205255	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88200060_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.36	chr1	-	3957	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	6	-640	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	126.33431590427	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGTCTGCCCTGCGG	8597	False	NA	-17	True	AATAAA	-21	NA	88205349	88190832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88191945_88192219_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.38	chr1	-	6456	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	171	-641	intron_retention	FALSE	canonical	3	316	junction_5	44.9310583004674	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCGGTCTGCCCTGCG	8889	False	NA	-18	True	AATAAA	-20	NA	88205057	88190833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88200488_88202763_88202820_88204940
ES.969.4	chr1	-	5218	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	28	-368	-26	368	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGAGTAGGCATGACC	8619	False	NA	NA	False	NA	NA	NA	88205327	88189824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.40	chr1	-	7253	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-6	-641	intron_retention	FALSE	canonical	3	259	junction_5	45.4902187288652	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCGGTCTGCCCTGCG	8639	False	NA	-18	True	AATAAA	-20	NA	88205307	88190833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88198022_88200450_88202820_88204940_88205008_88205095
ES.969.41	chr1	-	4379	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	21	-641	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	160.518641830163	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCGGTCTGCCCTGCG	8612	False	NA	-18	True	AATAAA	-20	NA	88205334	88190833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204691_88204855_88204940_88205008_88205095
ES.969.42	chr1	-	4087	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	15	-642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	121.221839513348	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8682	False	NA	-19	True	AATAAA	-19	NA	88205264	88190834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197129_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.43	chr1	-	5536	1	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	744	-642	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	737	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	9390	False	NA	-19	True	AATAAA	-19	NA	88196370	88190834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88190800_88196400
ES.969.44	chr1	-	4086	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	18	-642	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	143.767655920547	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGTCGGTCTGCCCTGC	8685	False	NA	-19	True	AATAAA	-19	NA	88205261	88190834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88204940_88205008_88205095
ES.969.48	chr1	-	4166	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-22	-643	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	137.596834588914	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8623	False	NA	-20	True	AATAAA	-18	NA	88205323	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88202763_88202820_88204940_88205008_88205095
ES.969.49	chr1	-	8331	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-23	-643	intron_retention	FALSE	non_canonical	0	0	junction_3	146.89839648168	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8622	False	NA	-20	True	AATAAA	-18	NA	88205324	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88198039_88199164_88199974_88200213_88202820_88204940_88205008_88205095
ES.969.5	chr1	-	7025	4	NNC	ENSMUSG00000044783.17	novel	2217	5	NA	NA	-821	193	intron_retention	FALSE	non_canonical	0	0	junction_3	151.518975709315	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCATTTTTATTGTGAG	6270	False	NA	NA	False	AAAACA	-42	NA	88199490	88189999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88198039_88199164
ES.969.50	chr1	-	6320	6	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	18	-643	intron_retention	FALSE	non_canonical	0	0	junction_4	167.827768858434	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8685	False	NA	-20	True	AATAAA	-18	NA	88205261	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88200450_88202821_88204940_88205008_88205095
ES.969.51	chr1	-	6193	4	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	435	-643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	176.844564519241	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	5354	False	NA	-20	True	AATAAA	-18	NA	88200406	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197129_88197923
ES.969.52	chr1	-	6059	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	27	-643	intron_retention	FALSE	non_canonical	0	0	junction_3	141.519739735112	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8618	False	NA	-20	True	AATAAA	-18	NA	88205328	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88198039_88199164_88199974_88200213_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.53	chr1	-	3954	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-1959	-643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	180.948427275103	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	2960	False	NA	-20	True	AATAAA	-18	NA	88202800	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88201789_88201855_88202763
ES.969.54	chr1	-	4089	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	11	-643	combination_of_known_splicesites	FALSE	canonical	1	12	junction_3	134.825220192663	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATGTCGGTCTGCCCTG	8602	False	NA	-20	True	AATAAA	-18	NA	88205344	88190835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88202763_88202820_88204940_88205008_88205095
ES.969.55	chr1	-	5966	6	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-698	-644	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	182.691652792348	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAATGTCGGTCTGCCCT	4221	False	NA	-21	True	AATAAA	-17	NA	88201539	88190836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198039_88199164_88199974_88200213
ES.969.58	chr1	-	4048	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	22	-644	at_least_one_novel_splicesite	FALSE	non_canonical	3	21	junction_5	137.691165812688	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAATGTCGGTCTGCCCT	8689	False	NA	-21	True	AATAAA	-17	NA	88205257	88190836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88202763_88202820_88204940_88205008_88205095
ES.969.59	chr1	-	4420	4	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	1001	-645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.3553390593274	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAATGTCGGTCTGCCC	5920	False	NA	-22	True	AATAAA	-16	NA	88199840	88190837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88197042_88197129_88197923_88198039_88199164
ES.969.6	chr1	-	4988	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-22	193	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACCATTTTTATTGTGAG	8623	False	NA	NA	False	AAAACA	-42	NA	88205323	88189999	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.60	chr1	-	5757	6	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-342	-645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	174.42545685765	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAATGTCGGTCTGCCC	4577	False	NA	-22	True	AATAAA	-16	NA	88201183	88190837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197775_88198039_88199164_88199974_88200213
ES.969.61	chr1	-	4159	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	19	-645	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	132.404682696648	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAATGTCGGTCTGCCC	8610	False	NA	-22	True	AATAAA	-16	NA	88205336	88190837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194373_88195665_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.63	chr1	-	5679	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-645	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	129.296684617438	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCAATGTCGGTCTGCCC	8718	False	NA	-22	True	AATAAA	-16	NA	88205228	88190837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.64	chr1	-	6401	6	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	2130	-646	intron_retention	FALSE	non_canonical	1	7	junction_2	160.059239033553	738	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCAATGTCGGTCTGCC	2662	False	NA	-23	True	AATAAA	-15	NA	88203098	88190838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194373_88195669_88195749_88197042_88197136_88197923_88198022_88200450
ES.969.65	chr1	-	10920	5	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	8	-649	intron_retention	FALSE	canonical	3	259	junction_4	68.4338183941244	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTACCAATGTCGGTCT	8726	False	NA	-26	True	AATAAA	-12	NA	88205220	88190841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88205008_88205095
ES.969.66	chr1	-	3612	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	18	1248	18	1109	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTTTCTATGT	8609	False	NA	-11	True	ATTAAA	-16	NA	88205337	88191440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.67	chr1	-	3551	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-26	1109	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTTTCTATGT	8619	False	NA	-11	True	ATTAAA	-16	NA	88205327	88191440	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.68	chr1	-	4289	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	1	1108	intron_retention	FALSE	canonical	3	259	junction_6	42.1772055341113	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTTTCTTTCTATG	8719	False	NA	-12	True	ATTAAA	-15	NA	88205227	88191441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88195669_88195749_88197042_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.69	chr1	-	3519	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-23	1108	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTTTCTTTCTATG	8622	False	NA	-12	True	ATTAAA	-15	NA	88205324	88191441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.7	chr1	-	6178	5	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-777	183	intron_retention	FALSE	non_canonical	0	0	junction_4	179.979686353766	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGTACCATTT	6314	False	NA	NA	False	AAAACA	-32	NA	88199446	88190009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88195749_88197042_88197136_88197923_88198039_88199164
ES.969.70	chr1	-	5572	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-960	1108	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	171.184760484753	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTGTTTCTTTCTATG	3959	False	NA	-12	True	ATTAAA	-15	NA	88201801	88191441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198039_88199164_88199974_88200213
ES.969.71	chr1	-	3621	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-11	1105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	157.548752375257	728	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTCTGTTTCTTTCT	8707	False	NA	-15	True	ATTAAA	-12	NA	88205239	88191444	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200453_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.72	chr1	-	5801	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-5	1104	intron_retention	FALSE	non_canonical	3	150	junction_1	89.5890846120924	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATTTTCTGTTTCTTTC	8640	False	NA	-16	True	ATTAAA	-11	NA	88205306	88191445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88202820_88204940_88205008_88205095
ES.969.73	chr1	-	5247	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	23	322	intron_retention	FALSE	non_canonical	0	0	junction_5	145.738064119616	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTGGTTGAACTGGGT	8614	False	NA	NA	False	GATAAA	-19	NA	88205332	88192227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88200488_88202763_88202818_88204940_88205008_88205095
ES.969.74	chr1	-	2750	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-13	321	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGGTTGAACTGGG	8632	False	NA	NA	False	GATAAA	-18	NA	88205314	88192228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.75	chr1	-	2735	8	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-26	321	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	184.557274999123	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGGTTGAACTGGG	8619	False	NA	NA	False	GATAAA	-18	NA	88205327	88192228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88193999_88194046_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88202763_88202826_88204940_88205008_88205095
ES.969.76	chr1	-	3669	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	20	321	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_6	133.258618389206	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTGGTTGAACTGGG	8687	False	NA	NA	False	GATAAA	-18	NA	88205259	88192228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88201789_88202820_88204940_88205008_88205095
ES.969.78	chr1	-	2668	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	18	320	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCCTGGTTGAACTGG	8685	False	NA	NA	False	GATAAA	-17	NA	88205261	88192229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.79	chr1	-	2737	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	104	2037	-23	320	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCCTGGTTGAACTGG	8695	False	NA	NA	False	GATAAA	-17	NA	88205251	88192229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.80	chr1	-	2851	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-23	320	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	155.65807881379	718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCCTGGTTGAACTGG	8695	False	NA	NA	False	GATAAA	-17	NA	88205251	88192229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.81	chr1	-	2556	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	81	2241	5	116	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCGGCTTAGTCTTAAGA	8672	False	NA	NA	False	NA	NA	NA	88205274	88192433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.969.82	chr1	-	5601	7	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-2098	-1	intron_retention	FALSE	non_canonical	0	0	junction_5	171.184760484753	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCCACTCCCCCATCT	2821	False	NA	NA	False	NA	NA	NA	88202939	88192550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198039_88199164_88199974_88200213
ES.969.83	chr1	-	6271	4	ISM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	3161	2360	-1353	-3	intron_retention	FALSE	canonical	3	369	junction_1	35.6931365951495	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTCCCCACTCCCCCAT	3566	False	NA	NA	False	NA	NA	NA	88202194	88192552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923
ES.969.84	chr1	-	4090	3	ISM	ENSMUSG00000044783.17	ENSMUST00000147393.2	2030	5	-90	6320	-17	-1920	5prime_fragment	FALSE	canonical	3	259	junction_2	28.5	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTCTTGCGCGCGCTCGA	8628	False	NA	NA	False	NA	NA	NA	88205318	88199019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr1_-_88202820_88204940_88205008_88205095
ES.969.9	chr1	-	4761	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	150	junction_1	84.2673387202895	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGGTGCAGGTTTGGC	8657	False	NA	NA	False	AATAAA	-24	NA	88205289	88190192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_88194001_88194051_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ES.9690.1	chr13	+	1752	1	Intergenic	novelGene_8096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTACTAGCTCCTTAAG	NA	False	NA	NA	False	AATATA	-43	NA	85396478	85398230	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_85396500_85398200
ES.9691.1	chr13	+	5010	1	Intergenic	novelGene_8097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGGGGGGGTAAAATAAGA	NA	False	NA	NA	False	AATAGA	-43	NA	85426033	85431043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_85426000_85431000
ES.9692.1	chr13	-	9264	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-320	-4381	-219	4381	multi-exon	TRUE	canonical	3	186	junction_11	23.7235232534199	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTAGTGTTGTTCATGA	NA	False	NA	NA	False	AATAAA	-21	NA	85437468	85358517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.10	chr13	-	4613	25	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-236	-286	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	51.9949249660217	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTACTATTTAACTTTA	NA	False	NA	2	True	AATAAA	-26	NA	85437485	85363184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381859_85382473_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.11	chr13	-	4897	13	NIC	ENSMUSG00000021549.15	novel	2102	15	NA	NA	-849	-290	intron_retention	FALSE	canonical	3	186	junction_10	29.1828526516667	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAGCTTACTATTTAAC	NA	False	NA	-2	True	AATAAA	-22	NA	85380014	85363188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506
ES.9692.12	chr13	-	6505	22	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-143	-293	intron_retention	FALSE	canonical	0	0	junction_9	69.6587405574808	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATTAGCTTACTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	85437392	85363191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85374813_85375070_85375244_85376349_85376427_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394840_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.13	chr13	-	4180	25	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	25	-293	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	52.0527910448187	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATTAGCTTACTATTT	NA	False	NA	-5	True	AATAAA	-19	NA	85437123	85363191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378530_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.14	chr13	-	4896	12	NIC	ENSMUSG00000021549.15	novel	2102	15	NA	NA	254	-294	intron_retention	FALSE	canonical	3	186	junction_9	29.5419578350399	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGATTAGCTTACTATT	NA	False	NA	-6	True	AATAAA	-18	NA	85378911	85363192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85374813_85375070_85376427_85376726_85376885_85377723_85377802_85378506
ES.9692.15	chr13	-	4411	26	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-41	-294	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.1675932764673	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGATTAGCTTACTATT	NA	False	NA	-6	True	AATAAA	-18	NA	85437189	85363192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85383759_85383861_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.16	chr13	-	4572	24	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-256	-295	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	52.9831445894448	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437505	85363193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.17	chr13	-	5491	24	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	48	-295	intron_retention	FALSE	canonical	3	186	junction_10	23.5841412866113	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437201	85363193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.18	chr13	-	4355	25	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	33	-295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	51.5573440183086	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437216	85363193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365150_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.19	chr13	-	4606	23	ISM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	31430	295	-6670	-295	3prime_fragment	FALSE	canonical	3	186	junction_11	24.5549224164124	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85405718	85363193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457
ES.9692.2	chr13	-	6729	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-28	-2138	-28	2138	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGATGGGTTTTTTTTT	NA	False	NA	NA	False	AAGAAA	-22	NA	85437176	85360760	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.21	chr13	-	4674	26	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-237	-295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	66.8528413756663	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTGATTAGCTTACTAT	NA	False	NA	-7	True	AATAAA	-17	NA	85437486	85363193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85397432_85397501_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.23	chr13	-	4532	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-451	482	-350	233	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTTGTTATCTTTG	NA	False	NA	68	True	TTTAAA	-32	NA	85437599	85363380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.24	chr13	-	5395	23	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-150	157	intron_retention	FALSE	canonical	3	196	junction_4	22.6753953376564	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTGACCATTTTATAG	NA	False	NA	-8	True	AATAAA	-35	NA	85437399	85363456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.25	chr13	-	5619	25	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-17	157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	51.8730923344014	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTGACCATTTTATAG	NA	False	NA	-8	True	AATAAA	-35	NA	85437165	85363456	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85396953_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.26	chr13	-	3644	26	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-37	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_25	51.0310336951937	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCATTTGACCATTTTA	NA	False	NA	-11	True	AATAAA	-32	NA	85437185	85363459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514_85436620_85437014
ES.9692.27	chr13	-	4340	25	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-238	154	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	51.9949249660217	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCATTTGACCATTTTA	NA	False	NA	-11	True	AATAAA	-32	NA	85437487	85363459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381859_85382473_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.29	chr13	-	3974	24	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	42	145	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	53.1641535357427	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCATGTTACCCATTTG	NA	False	NA	-20	True	AATAAA	-23	NA	85437207	85363468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.3	chr13	-	8440	16	NIC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-7154	2129	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	27.9504323162749	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTACTGTAGATGGG	NA	False	NA	NA	False	AAGAAA	-13	NA	85386319	85360769	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85381865_85382478_85382600_85386257
ES.9692.30	chr13	-	4301	25	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	-220	142	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	52.0536415366132	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATGTTACCCAT	NA	False	NA	-23	True	AATAAA	-20	NA	85437469	85363471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392316_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.33	chr13	-	4322	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-351	592	-250	123	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTGGTCATTGTACCA	NA	False	NA	-42	True	AATAAA	-1	NA	85437499	85363490	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.35	chr13	-	4202	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-348	709	-247	6	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGCTTTATTTTTTAA	NA	False	NA	NA	False	TATAAA	-18	NA	85437496	85363607	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.38	chr13	-	3972	22	ISM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	17	3579	17	-2307	5prime_fragment	FALSE	canonical	3	186	junction_8	24.3274151781832	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTATAGTTTTTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85437131	85366477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.39	chr13	-	3965	21	NNC	ENSMUSG00000021549.15	novel	831	3	NA	NA	29	-483	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	55.3298292063151	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAGAGAGTGGATGATT	NA	False	NA	NA	False	AATAAA	-12	NA	85437220	85369972	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85371081_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.4	chr13	-	6840	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-319	-1958	-218	1958	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCGTTGGTTAATAAGT	NA	False	NA	NA	False	AGTAAA	-19	NA	85437467	85360940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.40	chr13	-	4360	20	ISM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	22	7081	22	-490	5prime_fragment	FALSE	canonical	3	186	junction_6	24.2320270661386	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACAGACAAGAGAGTG	NA	False	NA	NA	False	AATAAA	-5	NA	85437126	85369979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.41	chr13	-	3770	21	NNC	ENSMUSG00000021549.15	novel	831	3	NA	NA	-42	-648	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	55.3298292063151	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGAGTGTTTACTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	85437190	85370137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85371081_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.42	chr13	-	3341	21	NNC	ENSMUSG00000021549.15	novel	831	3	NA	NA	-237	-1373	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	55.3298292063151	296	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCTTAAATATGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	85437486	85370862	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85371081_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.43	chr13	-	3122	9	ISM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-261	21925	-160	1480	5prime_fragment	FALSE	canonical	3	206	junction_4	12.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCCCCAAAAAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	85437409	85384823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.6	chr13	-	4619	26	NNC	ENSMUSG00000021549.15	novel	4563	25	NA	NA	18	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	66.8528413756663	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCATAAAGCATTCGATT	NA	False	NA	NA	False	AATAAA	-35	NA	85437130	85362892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85397432_85397501_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.7	chr13	-	4907	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-339	-5	-238	5	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCCATAAAGCATTCGAT	NA	False	NA	NA	False	AATAAA	-34	NA	85437487	85362893	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9692.9	chr13	-	4719	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	-440	284	-339	-284	multi-exon	FALSE	canonical	3	186	junction_11	23.7235232534199	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACTATTTAACTTTATT	NA	False	NA	4	True	AATAAA	-28	NA	85437588	85363182	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ES.9693.1	chr13	-	7101	1	Intergenic	novelGene_8098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTAGTCGGCCATCA	NA	False	NA	NA	False	NA	NA	NA	85993460	85986359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_85986400_85993500
ES.9694.1	chr13	-	4163	1	FSM	ENSMUSG00000064917.2	ENSMUST00000082983.2	60	1	-3911	-192	-3911	192	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGAATGTGATAGTTA	NA	False	NA	5	True	AATAAA	-35	NA	86197078	86192915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_86192900_86197100
ES.9694.12	chr13	-	1318	1	Intergenic	novelGene_8100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCTTTTGAGTGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	86202351	86201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_86201000_86202400
ES.9694.13	chr13	-	510	2	Intergenic	novelGene_8099	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCTTTTGAGTGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	86202309	86201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_86201318_86202083
ES.9694.14	chr13	-	611	2	Intergenic	novelGene_8101	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGGCTTTTGAGTGTT	NA	False	NA	NA	False	AGTAAA	-16	NA	86202401	86201033	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_86201318_86202074
ES.9694.2	chr13	-	496	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	63	-19	63	19	multi-exon	FALSE	canonical	3	10515	junction_1	2196	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGAATGTGATAGTTA	NA	False	NA	5	True	AATAAA	-35	NA	86194960	86192915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_86193028_86193845_86193989_86194719
ES.9694.3	chr13	-	406	3	FSM	ENSMUSG00000017778.15	ENSMUST00000017922.9	315	3	-9	-82	-9	3	multi-exon	FALSE	canonical	3	419	junction_2	5048	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTCGTCTCTGCAATA	NA	False	NA	-11	True	AATAAA	-19	NA	86194902	86192931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_86193028_86193845_86193973_86194719
ES.9694.4	chr13	-	351	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	9	3	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	7449.5	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCTCGTCTCTGCAATA	NA	False	NA	-11	True	AATAAA	-19	NA	86194884	86192931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_86193028_86193898_86193989_86194719
ES.9694.5	chr13	-	420	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7453	381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCCTCGTCTCTGCAA	NA	False	NA	-13	True	AATAAA	-17	NA	86194909	86192933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_86193021_86193845_86193989_86194719
ES.9694.6	chr13	-	6082	2	FSM	ENSMUSG00000017778.15	ENSMUST00000132233.2	709	2	-5368	-5	-4811	0	multi-exon	FALSE	canonical	3	10515	junction_1	0	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	-14	True	AATAAA	-16	NA	86199834	86192934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_86193028_86193845
ES.9694.7	chr13	-	404	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7453.5	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCAATGCCTCGTCT	NA	False	NA	-19	True	AATAAA	-11	NA	86194902	86192939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_86193011_86193838_86193989_86194719
ES.9694.8	chr13	-	554	3	NNC	ENSMUSG00000017778.15	novel	433	3	NA	NA	-7374	0	at_least_one_novel_splicesite	FALSE	canonical	3	183	junction_2	5166	387	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCAATGCCTCGTCT	NA	False	NA	-19	True	AATAAA	-11	NA	86202397	86192939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_86193028_86193845_86193989_86202074
ES.9695.1	chr13	-	179	1	Intergenic	novelGene_8102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATTATTCAAT	NA	False	NA	NA	False	NA	NA	NA	86266107	86265928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_86265900_86266100
ES.9696.1	chr13	-	4634	2	Intergenic	novelGene_8103	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	87501809	87497107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_87501579_87501646
ES.9696.2	chr13	-	3073	2	Intergenic	novelGene_8104	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	87522143	87497109	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_87498878_87520838
ES.9697.1	chr13	-	7854	1	Intergenic	novelGene_8105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTATGTGACTTGTATT	NA	False	NA	NA	False	ATTAAA	-27	NA	88865481	88857627	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_88857600_88865500
ES.9698.1	chr13	+	179	1	Intergenic	novelGene_8106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGAAAGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	89634708	89634887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_89634700_89634900
ES.9699.1	chr13	+	3079	8	Intergenic	novelGene_8107	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCGCGTTGCCCCGGAA	NA	False	NA	NA	False	NA	NA	NA	89839690	89890251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_89841619_89860321_89860617_89869684_89869814_89869890_89870064_89873405_89873783_89876835_89876879_89879579_89879653_89890190
ES.9699.2	chr13	+	3039	7	Intergenic	novelGene_8108	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGCGTTGCCCCGGAAG	NA	False	NA	NA	False	NA	NA	NA	89839690	89890252	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_89841619_89860321_89860617_89869684_89869814_89869890_89870064_89873405_89873783_89879577_89879653_89890190
ES.9699.3	chr13	+	3383	1	Antisense	novelGene_ENSMUSG00000021614.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTCTATATGCCAGG	NA	False	NA	NA	False	NA	NA	NA	89839690	89843073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_89839700_89843100
ES.9699.4	chr13	+	3493	1	Antisense	novelGene_ENSMUSG00000021614.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACCAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89852065	89855558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_89852100_89855600
ES.97.1	chr1	-	3210	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTTAGCTCCGTTT	NA	False	NA	NA	False	NA	NA	NA	11692898	11689688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_11689700_11692900
ES.97.2	chr1	-	1830	2	Antisense	novelGene_ENSMUSG00000057715.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATTGCCTTAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	11692197	11689691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_11689905_11690580
ES.970.1	chr1	+	3919	5	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-78	11778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.1600721882519	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTGTGTGTGTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	88387326	88405058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88393237_88393528_88398098_88398830_88402183_88403488_88404176
ES.970.11	chr1	+	3859	5	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-14	11780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.4127122105133	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTGTGTGTGCGT	NA	False	NA	NA	False	AATAAA	-14	NA	88387390	88405060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387678_88393237_88393528_88397558_88397777_88398642_88398830_88402183
ES.970.12	chr1	+	1251	3	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-13	9681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGCTTCGAGTGAC	NA	False	NA	1	True	ATTAAA	-15	NA	88387391	88402961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387678_88398642_88398830_88402183
ES.970.13	chr1	+	3557	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-2	11780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.657891697365	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTGTGTGTGCGT	NA	False	NA	NA	False	AATAAA	-14	NA	88387402	88405060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387678_88397558_88397777_88398642_88398830_88402183
ES.970.14	chr1	+	1789	7	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	391	9681	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	9.51168871558685	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGCTTCGAGTGAC	NA	False	NA	1	True	ATTAAA	-15	NA	88387795	88402961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387877_88387916_88388039_88390701_88390815_88393237_88393528_88397558_88397777_88398642_88398830_88402183
ES.970.15	chr1	+	1759	3	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	15.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCGAGTGACAATGTCT	NA	False	NA	8	True	ATTAAA	-22	NA	88387795	88402968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88388039_88398098_88398830_88402183
ES.970.16	chr1	+	2015	3	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTAAGATGCGGTTTTAT	NA	False	NA	NA	False	CATAAA	-15	NA	88387814	88421501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88388039_88398680_88398830_88419859
ES.970.17	chr1	+	6522	1	Genic_Genomic	ENSMUSG00000100908.2	novel	NA	NA	NA	NA	4714	5360	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGGACTTCTGATTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	88392118	88398640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_88392100_88398600
ES.970.19	chr1	+	3696	3	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	15.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGCGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	88397693	88405065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88397777_88398098_88398830_88402183
ES.970.2	chr1	+	3880	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-69	11780	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	12.3558353285671	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGTGTGTGTGCGT	NA	False	NA	NA	False	AATAAA	-14	NA	88387335	88405060	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88390701_88390815_88398642_88398830_88402183
ES.970.3	chr1	+	4305	3	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-65	11778	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTGTGTGTGTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	88387339	88405058	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88398098_88398830_88402183
ES.970.4	chr1	+	1323	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-62	9681	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.96655480858378	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGCTTCGAGTGAC	NA	False	NA	1	True	ATTAAA	-15	NA	88387342	88402961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387414_88393237_88393528_88398642_88398830_88402186
ES.970.5	chr1	+	1655	3	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-59	9681	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	1	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGCTTCGAGTGAC	NA	False	NA	1	True	ATTAAA	-15	NA	88387345	88402961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88398642_88398830_88402186
ES.970.6	chr1	+	3749	3	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-59	11775	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTGCTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-9	NA	88387345	88405055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88398645_88398830_88402183
ES.970.7	chr1	+	2060	5	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-58	9681	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	9.24662100445346	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAGCTTCGAGTGAC	NA	False	NA	1	True	ATTAAA	-15	NA	88387346	88402961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88388039_88390701_88390815_88393237_88393528_88398642_88398830_88402183
ES.970.9	chr1	+	1476	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	-23	9678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.657891697365	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAAAGTAGCTTCGAGT	NA	False	NA	-2	True	ATTAAA	-12	NA	88387381	88402958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88387678_88397558_88397777_88398642_88398830_88402183
ES.9700.1	chr13	-	9709	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-347	-1030	-160	2	multi-exon	TRUE	canonical	3	34	junction_8	8.56786344567119	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGACTTGTCTGTTTATT	2446	False	NA	1	True	AAGAAA	-25	NA	89890788	89803428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.10	chr13	-	4487	2	ISM	ENSMUSG00000021614.17	ENSMUST00000109543.9	2321	13	80598	-40	16475	1	3prime_fragment	FALSE	canonical	3	59	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCAGCCTATCTAAT	NA	False	NA	-2	True	AATAAA	-28	NA	89809765	89805134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_89805478_89805621
ES.9700.11	chr13	-	4655	7	NIC	ENSMUSG00000021614.17	novel	8332	14	NA	NA	-12751	-4	intron_retention	FALSE	canonical	3	44	junction_3	6.2893207547044	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACCATTTTCAGCCTAT	NA	False	NA	-7	True	AATAAA	-23	NA	89839778	89805139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403
ES.9700.12	chr13	-	7794	14	NNC	ENSMUSG00000021614.17	novel	8332	14	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	15.9269783403273	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGAATAAAATGAAAGAAA	2597	False	NA	-39	True	AATGAA	-18	NA	89890637	89805171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841596_89860319_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.13	chr13	-	3610	7	NNC	ENSMUSG00000021614.17	novel	12427	15	NA	NA	-12289	-3332	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1369334592098	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGAGTGTGTGTGTGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	89839316	89809105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89809188_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403
ES.9700.14	chr13	-	3531	7	ISM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-302	35231	-115	19112	5prime_fragment	FALSE	canonical	3	34	junction_1	10.5264217830921	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGCCTGACTCAAAAGG	2491	False	NA	NA	False	NA	NA	NA	89890743	89839689	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.15	chr13	-	6442	1	NIC	ENSMUSG00000021614.17	novel	12427	15	NA	NA	16479	11632	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATTAAGATGCTATC	NA	False	NA	NA	False	CATAAA	-41	NA	89853611	89847169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89847200_89853600
ES.9700.16	chr13	-	4156	1	NIC	ENSMUSG00000021614.17	novel	12427	15	NA	NA	16471	9338	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTATTGTGTTGTTAG	NA	False	NA	NA	False	NA	NA	NA	89853619	89849463	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89849500_89853600
ES.9700.17	chr13	-	4182	6	FSM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-230	-1679	-39	1136	multi-exon	FALSE	canonical	3	48	junction_2	6.6932802122726	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAGTGAATCAAAAAT	2567	False	NA	NA	False	NA	NA	NA	89890667	89857665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.18	chr13	-	3902	6	FSM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-350	-1279	-159	736	multi-exon	FALSE	canonical	3	48	junction_2	6.6932802122726	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTCTAATGACCTCTT	2447	False	NA	NA	False	AATAAA	-15	NA	89890787	89858065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.19	chr13	-	2825	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-241	12176	-50	2032	5prime_fragment	FALSE	canonical	3	54	junction_2	6.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATGGATTTGCCTCTT	2556	False	NA	NA	False	TTTAAA	-5	NA	89890678	89871520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_89873783_89879577_89879654_89890191
ES.9700.2	chr13	-	4376	13	FSM	ENSMUSG00000021614.17	ENSMUST00000109543.9	2321	13	-315	-1740	-50	-4	multi-exon	FALSE	canonical	3	4	junction_7	15.55813470682	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGTGACTTGTCTG	2556	False	NA	-5	True	AAGAAA	-19	NA	89890678	89803434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.20	chr13	-	1289	3	ISM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	-373	13844	-182	364	5prime_fragment	FALSE	canonical	3	54	junction_2	6.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTCAAGACATGGTAC	2424	False	NA	NA	False	AATAAA	-23	NA	89890810	89873188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_89873783_89879577_89879654_89890191
ES.9700.3	chr13	-	4616	9	NNC	ENSMUSG00000021614.17	novel	8332	14	NA	NA	-13105	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	18.3469173159962	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGTGACTTGTCTG	NA	False	NA	-5	True	AAGAAA	-19	NA	89840132	89803434	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89837074_89839027
ES.9700.4	chr13	-	3562	1	NIC	ENSMUSG00000021614.17	novel	12427	15	NA	NA	19243	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACATTGTGACTTGTCT	NA	False	NA	-6	True	AAGAAA	-18	NA	89806997	89803435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89803400_89807000
ES.9700.5	chr13	-	9112	15	NNC	ENSMUSG00000021614.17	novel	12427	15	NA	NA	-782	122	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_14	15.6819472447702	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTGGATGTTATTTT	1824	False	NA	NA	False	AATAAA	-22	NA	89891410	89804336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191_89891055_89891365
ES.9700.6	chr13	-	11573	15	FSM	ENSMUSG00000021614.17	ENSMUST00000109546.9	12427	15	-59	913	-59	115	multi-exon	FALSE	canonical	2	4	junction_8	18.7382616317414	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGATTTAATTTATTGGATG	2547	False	NA	NA	False	AATAAA	-15	NA	89890687	89804343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89851036_89853917_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.7	chr13	-	3574	13	FSM	ENSMUSG00000021614.17	ENSMUST00000109543.9	2321	13	-424	-829	-159	113	multi-exon	FALSE	canonical	3	4	junction_7	15.55813470682	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGATTTAATTTATTGGA	2447	False	NA	NA	False	AATAAA	-13	NA	89890787	89804345	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.8	chr13	-	8007	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-173	498	14	179	multi-exon	FALSE	canonical	3	34	junction_8	8.56786344567119	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGCATATTTAATGATG	2620	False	NA	NA	False	AATAAA	-14	NA	89890614	89804956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9700.9	chr13	-	7998	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-339	673	-152	4	multi-exon	FALSE	canonical	3	34	junction_8	8.56786344567119	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTATCTAATTTC	2454	False	NA	1	True	AATAAA	-31	NA	89890780	89805131	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ES.9701.1	chr13	+	1945	1	Intergenic	novelGene_8110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAGAATAATAACTAAT	NA	False	NA	NA	False	NA	NA	NA	90055857	90057802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90055900_90057800
ES.9702.1	chr13	+	1204	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	517	6968	-94	628	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTCTGGGTACTATGCT	NA	False	NA	4	True	TATAAA	-17	NA	90237758	90253408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.10	chr13	+	1422	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	545	6722	-66	874	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTGAAGTTTCTATAAA	NA	False	NA	NA	False	AAAAAG	-21	NA	90237786	90253654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.11	chr13	+	6210	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	564	1915	-47	-1915	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATCACAGGTTATCTT	NA	False	NA	NA	False	AATAAA	-24	NA	90237805	90258461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.12	chr13	+	434	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	574	7681	-37	-85	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATGCTATTGGACC	NA	False	NA	17	True	GATAAA	-19	NA	90237815	90252695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.13	chr13	+	4912	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	593	3184	-18	-3184	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTAGATCCATACACCAG	NA	False	NA	NA	False	NA	NA	NA	90237834	90257192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.14	chr13	+	639	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	7439	0	157	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTAGCGACTGGCCTA	NA	False	NA	4	True	NA	NA	NA	90237852	90252937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.15	chr13	+	3900	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	612	4177	1	3419	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTTCTGTGTTACTG	NA	False	NA	NA	False	NA	NA	NA	90237853	90256199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.16	chr13	+	989	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	616	7084	5	512	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGGTATTTGTGGTGT	NA	False	NA	NA	False	AATAGA	-20	NA	90237857	90253292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.17	chr13	+	5010	1	NIC	ENSMUSG00000012422.15	novel	8689	4	NA	NA	5	-9913	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGTATAAATATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	90237857	90242867	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_90237900_90242900
ES.9702.18	chr13	+	3681	3	NNC	ENSMUSG00000012422.15	novel	8689	4	NA	NA	8	3217	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	516.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCCGTCTAGTTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	90237860	90255997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_90237903_90246480_90246591_90252468
ES.9702.19	chr13	+	274	4	FSM	ENSMUSG00000012422.15	ENSMUST00000012566.9	1541	4	-12	1279	-12	-1279	multi-exon	FALSE	canonical	1	1	junction_3	564.815013964749	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGACTCATTATAGAAG	NA	False	NA	NA	False	AATACA	-21	NA	90237868	90251501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90251406
ES.9702.2	chr13	+	3597	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	517	4575	-94	3021	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCTTGTTACAGGGGGT	NA	False	NA	13	True	AATAAA	-23	NA	90237758	90255801	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.20	chr13	+	907	5	NNC	ENSMUSG00000012422.15	novel	1541	4	NA	NA	-6	38	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	595.160640079634	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCTGTTGTGTCAGGAC	NA	False	NA	6	True	NA	NA	NA	90237874	90252818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_90237903_90246480_90246591_90249026_90249062_90251406_90251816_90252493
ES.9702.21	chr13	+	134	1	FSM	ENSMUSG00000088308.3	ENSMUST00000157683.3	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCATGGGAGGGCCTTCC	NA	False	NA	4	True	NA	NA	NA	90247099	90247233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90247100_90247200
ES.9702.3	chr13	+	2734	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	526	5429	-85	2167	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACAAATCCTTGCCTCC	NA	False	NA	NA	False	CATAAA	-24	NA	90237767	90254947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.4	chr13	+	607	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	528	7554	-83	42	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGTGTCAGGACTGCT	NA	False	NA	10	True	NA	NA	NA	90237769	90252822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.5	chr13	+	3778	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	536	4375	-75	3221	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCGTCTAGTTTTGATAT	NA	False	NA	NA	False	AATAAA	-15	NA	90237777	90256001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.6	chr13	+	2933	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	536	5220	-75	2376	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAATGAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	90237777	90255156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.7	chr13	+	821	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	536	7332	-75	264	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAGTACCTCTATTCTT	NA	False	NA	4	True	TTTAAA	-16	NA	90237777	90253044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.8	chr13	+	2101	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	537	6051	-74	1545	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATCATATAAAGAAAGGCA	NA	False	NA	NA	False	GATAAA	-2	NA	90237778	90254325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9702.9	chr13	+	3221	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	539	4929	-72	2667	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAGTTGACTAAGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	90237780	90255447	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ES.9703.1	chr13	-	1551	9	NIC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	5	11	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	62.5119988482211	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTGAACTTTTTCTT	NA	False	NA	4	True	AATAAA	-25	NA	90237637	89997028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90225121_90225212_90237615
ES.9703.2	chr13	-	1630	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	-90	0	-90	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237817	89997039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ES.9703.3	chr13	-	1706	8	NIC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	49.108792180095	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237406	89997039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237128
ES.9703.4	chr13	-	1584	9	NNC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	62.7234754697155	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237654	89997039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219805_90225121_90225243_90237615
ES.9703.5	chr13	-	1489	8	NNC	ENSMUSG00000021615.14	novel	1540	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	52.1226966896771	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237655	89997039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_89997583_90089080_90089229_90139191_90139305_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ES.9703.6	chr13	-	1901	2	Intergenic	novelGene_8109	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGTTTTCCTCTAAC	NA	False	NA	NA	False	AGTAAA	-14	NA	90209056	90036098	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_90036705_90207761
ES.9703.7	chr13	-	3327	7	ISM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	73	89638	1	-89638	5prime_fragment	FALSE	canonical	3	131	junction_2	13.560563737872	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATATTAAAATGTTCCTT	NA	False	NA	NA	False	AATAAA	-27	NA	90237654	90086677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ES.9703.8	chr13	-	4467	1	Intergenic	novelGene_8111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACCCTCTGCCATTATA	NA	False	NA	NA	False	NA	NA	NA	90158513	90154046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_90154000_90158500
ES.9703.9	chr13	-	664	1	Intergenic	novelGene_8112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAGGGGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	90199669	90199005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_90199000_90199700
ES.9704.1	chr13	-	7441	1	Intergenic	novelGene_8113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAATGGACTCAAATT	NA	False	NA	NA	False	AGTAAA	-13	NA	90246304	90238863	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_90238900_90246300
ES.9705.1	chr13	-	2304	1	Antisense	novelGene_ENSMUSG00000012422.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	90252246	90249942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_90249900_90252200
ES.9706.1	chr13	+	4460	1	Genic_Genomic	ENSMUSG00000012422.15	novel	NA	NA	NA	NA	22051	4015	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAACTAGTAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	90259931	90264391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_90259900_90264400
ES.9707.1	chr13	+	171	1	Intergenic	novelGene_8114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTTAAGCT	NA	False	NA	NA	False	NA	NA	NA	90349349	90349520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90349300_90349500
ES.9708.1	chr13	+	85	1	Intergenic	novelGene_8115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	90576049	90576134	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90576000_90576100
ES.9709.1	chr13	+	3819	1	Intergenic	novelGene_8116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAATCTGCAAATTCATT	NA	False	NA	NA	False	NA	NA	NA	90594316	90598135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90594300_90598100
ES.971.1	chr1	+	2970	1	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAAGTGTGACTGTCTG	NA	False	NA	NA	False	AATAAA	-13	NA	88422044	88425014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88422000_88425000
ES.9710.1	chr13	-	1345	4	Antisense	novelGene_ENSMUSG00000094277.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCTGTATTTCCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	90742057	90614833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_90615443_90622852_90623028_90697212_90697282_90741565
ES.9710.2	chr13	-	1053	5	Antisense	novelGene_ENSMUSG00000094277.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCTGTATTTCCAAA	NA	False	NA	NA	False	AATAAA	-22	NA	90741639	90614833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_90615443_90622852_90623028_90650623_90650750_90697212_90697282_90741565
ES.9710.3	chr13	-	1784	6	Antisense	novelGene_ENSMUSG00000094277.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.00665927567458	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTCTGTATTTCCAA	NA	False	NA	NA	False	AATAAA	-21	NA	90741981	90614834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_90615443_90619946_90620337_90622852_90623028_90650623_90650750_90697212_90697282_90741565
ES.9710.4	chr13	-	952	3	Antisense	novelGene_ENSMUSG00000094277.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATGCTAAATACTCTG	NA	False	NA	NA	False	AATAAA	-12	NA	90741849	90614843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_90615443_90697212_90697282_90741565
ES.9711.1	chr13	+	202	1	Intergenic	novelGene_8117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTAGTCACTTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	90954727	90954929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90954700_90954900
ES.9712.1	chr13	-	161	1	Intergenic	novelGene_8118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	90984264	90984103	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_90984100_90984300
ES.9713.1	chr13	+	174	1	Intergenic	novelGene_8119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAATGGATATGTAT	NA	False	NA	NA	False	NA	NA	NA	90988064	90988238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_90988100_90988200
ES.9714.1	chr13	+	179	1	Intergenic	novelGene_8120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACCTATGA	NA	False	NA	NA	False	NA	NA	NA	91005602	91005781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_91005600_91005800
ES.9715.1	chr13	+	813	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	-101	225	-101	1	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTGTCTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	91070975	91072844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ES.9715.2	chr13	+	778	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	170	-11	-89	11	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATAATTTTCGGTGATTG	NA	False	NA	38	True	AATAAA	-34	NA	91071246	91073080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ES.9715.3	chr13	+	598	3	ISM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	203	226	-56	0	intron_retention	FALSE	canonical	3	13520	junction_1	3316	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	91071279	91072843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_91071319_91071705_91071866_91072444
ES.9715.5	chr13	+	890	3	NIC	ENSMUSG00000049517.9	novel	658	4	NA	NA	-52	0	intron_retention	FALSE	canonical	3	19809	junction_2	171.5	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	91071283	91072842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_91071866_91072444_91072566_91072655
ES.9715.7	chr13	+	683	4	FSM	ENSMUSG00000049517.9	ENSMUST00000224463.2	658	4	-24	-1	-24	0	multi-exon	FALSE	canonical	3	45	junction_1	9398.7280108652	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATATTTTGTGTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	91071311	91072843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_91071526_91071705_91071866_91072444_91072566_91072655
ES.9716.1	chr13	+	177	1	Intergenic	novelGene_8121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATAATGTACTTCA	NA	False	NA	NA	False	NA	NA	NA	91348893	91349070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_91348900_91349100
ES.9717.1	chr13	+	115	1	Intergenic	novelGene_8122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTTGA	NA	False	NA	NA	False	AATAAA	-9	NA	91366243	91366358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_91366200_91366400
ES.9718.1	chr13	-	1595	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	-6	-6	-6	6	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTACTGTTACTTTGTCCC	NA	False	NA	NA	False	ATTAAA	-21	NA	91372093	91083468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
ES.9718.2	chr13	-	1888	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	-25906	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	14.159441935273	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	91397993	91083474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91397658
ES.9718.3	chr13	-	1240	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6061	35	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGAGCAATGGATT	4941	False	NA	NA	False	AATAAA	-33	NA	91366017	91083952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
ES.9718.4	chr13	-	1440	9	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6050	20	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.0399347123162	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTCCCACAGTCAAATT	4930	False	NA	NA	False	AATAAA	-18	NA	91366028	91083967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91109401_91109606_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
ES.9718.5	chr13	-	814	6	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	-2	-26440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1482781552411	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAGAATGGCTTTCTT	NA	False	NA	NA	False	TTTAAA	-26	NA	91372089	91110564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91110898_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
ES.9719.1	chr13	+	181	1	Intergenic	novelGene_8123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGTAGA	NA	False	NA	NA	False	NA	NA	NA	91400335	91400516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_91400300_91400500
ES.972.1	chr1	-	176	1	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATCATCATTGG	NA	False	NA	NA	False	NA	NA	NA	88463538	88463362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88463400_88463500
ES.9720.1	chr13	+	1684	18	NNC	ENSMUSG00000003992.16	novel	3957	17	NA	NA	15	-117	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.397946327396	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGCTGTGTAC	2777	False	NA	NA	False	ATTAAA	-21	NA	91609224	91849238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_91609368_91619259_91619353_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9720.2	chr13	+	1498	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	18	117	18	-117	multi-exon	FALSE	canonical	3	11	junction_4	12.5973542195706	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGCTGTGTAC	2780	False	NA	NA	False	ATTAAA	-21	NA	91609227	91849238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9720.3	chr13	+	5225	16	NIC	ENSMUSG00000003992.16	novel	3957	17	NA	NA	-3	5	intron_retention	FALSE	canonical	3	38	junction_12	7.22833928982923	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCACTGTGTCTGAAG	2795	False	NA	-1	True	AATAAA	-19	NA	91609242	91849360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9720.4	chr13	+	2354	6	NNC	ENSMUSG00000003992.16	novel	3957	17	NA	NA	2	1562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.8703866730915	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTATATTAAGATTT	2800	False	NA	NA	False	NA	NA	NA	91609247	91807457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_91609272_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91805437
ES.9720.5	chr13	+	1685	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	85	2187	8	6	multi-exon	FALSE	canonical	3	38	junction_13	7.3396930283221	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCACTGTGTCTGAAGC	2806	False	NA	0	True	AATAAA	-20	NA	91609253	91849361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9720.6	chr13	+	1639	16	NIC	ENSMUSG00000003992.16	novel	3957	17	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	14.2557590701676	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	2810	False	NA	-6	True	AATAAA	-14	NA	91609257	91849355	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9720.8	chr13	+	1509	12	NNC	ENSMUSG00000003992.16	novel	880	7	NA	NA	-20805	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.0565316744924	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTTCATTCACTGTGT	NA	False	NA	-7	True	AATAAA	-13	NA	91797750	91849354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_91798042_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ES.9721.1	chr13	-	182	1	Intergenic	novelGene_8124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAAGACAACTGC	NA	False	NA	0	True	NA	NA	NA	91665236	91665054	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_91665100_91665200
ES.9722.1	chr13	-	184	1	Intergenic	novelGene_8125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGTGCCTAGCAGA	NA	False	NA	NA	False	NA	NA	NA	91935606	91935422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_91935400_91935600
ES.9723.1	chr13	-	2781	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	7	-1247	7	1247	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACATGTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	91955817	91943404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ES.9723.10	chr13	-	1462	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	56.3427013906859	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955814	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_91945374_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ES.9723.11	chr13	-	3249	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	139	junction_4	11.5974135047432	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTTGAACTGATC	NA	False	NA	NA	False	AATAAA	-15	NA	91955814	91944652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_91945374_91946941_91948823_91948984_91949136_91953869_91954280_91955728
ES.9723.12	chr13	-	4832	4	NNC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_2	66.7349650150171	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTTGAACTGATC	NA	False	NA	NA	False	AATAAA	-15	NA	91955815	91944652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91948823_91948984_91949136_91953855_91954280_91955728
ES.9723.13	chr13	-	960	1	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	10	-6251	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	91955814	91954854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_91954900_91955800
ES.9723.2	chr13	-	5904	2	NNC	ENSMUSG00000021621.16	novel	3421	4	NA	NA	1723	1218	intron_retention	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91954057	91943433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91949136_91953855
ES.9723.3	chr13	-	1556	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	1	-16	1	16	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGTTACTTTCACTCT	NA	False	NA	NA	False	AATAAA	-32	NA	91955823	91944635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ES.9723.4	chr13	-	4972	3	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	18	0	intron_retention	FALSE	canonical	3	139	junction_2	8.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955806	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_91949136_91953869_91954280_91955728
ES.9723.5	chr13	-	1546	6	NNC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.3569382921301	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955815	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953855_91954280_91955728
ES.9723.6	chr13	-	2899	5	ISM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	91	0	47	0	intron_retention	FALSE	canonical	3	84	junction_2	32.5451609306207	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955733	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869
ES.9723.7	chr13	-	3121	5	NNC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_3	57.9671243033497	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955822	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91947011_91948729_91948823_91948984_91949136_91953855_91954280_91955728
ES.9723.8	chr13	-	3265	5	NNC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	9	0	intron_retention	FALSE	canonical	0	0	junction_3	66.2231077494857	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955815	91944651	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_91945374_91946941_91948823_91948984_91949136_91953855_91954280_91955728
ES.9724.1	chr13	-	227	1	Intergenic	novelGene_8126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCAAGGGCTTAGCTA	NA	False	NA	2	True	NA	NA	NA	92005636	92005409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_92005400_92005600
ES.9725.1	chr13	+	7714	3	Antisense	novelGene_ENSMUSG00000014850.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCAAAATTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	92392514	92409235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_92393310_92400227_92400346_92402434
ES.9726.1	chr13	+	1971	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	23	3353	23	-3353	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTTTCAGATCATCA	NA	False	NA	30	True	AATAAA	-33	NA	92491256	92522208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.10	chr13	+	5002	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	-75	420	75	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTCATGTATCATCTC	NA	False	NA	NA	False	NA	NA	NA	92491653	92525636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.11	chr13	+	3768	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	1159	420	-1159	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTAGTGTTATTTTCTG	NA	False	NA	NA	False	ATTAAA	-17	NA	92491653	92524402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.12	chr13	+	1406	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	3520	421	-3520	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	92491654	92522041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.13	chr13	+	2220	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	2706	421	-2706	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTTCTTCTCCAACCA	NA	False	NA	NA	False	NA	NA	NA	92491654	92522855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.14	chr13	+	1459	7	NNC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	421	-3394	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	528.781513376639	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATGAGCAT	NA	False	NA	-11	True	ACTAAA	-7	NA	92491654	92522167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232_92521560_92521632
ES.9726.15	chr13	+	4817	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	421	7	combination_of_known_splicesites	FALSE	canonical	3	22	junction_4	636.728896391549	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAAAAGGAAATTATTT	NA	False	NA	NA	False	AAGAAA	-44	NA	92491654	92525568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92521232
ES.9726.16	chr13	+	707	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	421	-4169	combination_of_known_splicesites	FALSE	canonical	2	55	junction_1	508.437496158574	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAGTAATTATTTCT	NA	False	NA	28	True	NA	NA	NA	92491654	92521392	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92491853_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.17	chr13	+	1496	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	426	-3375	combination_of_known_splicesites	FALSE	canonical	2	55	junction_1	508.437496158574	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGGCTTTCCTCATC	NA	False	NA	8	True	AATAAA	-11	NA	92491659	92522186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92491853_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.18	chr13	+	1336	7	NNC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	426	-3394	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	528.781513376639	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATGAGCAT	NA	False	NA	-11	True	ACTAAA	-7	NA	92491659	92522167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232_92521476_92521666
ES.9726.2	chr13	+	1283	6	NNC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	29	-3738	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	538.171942784088	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGAGACTGGATTATT	NA	False	NA	8	True	TATAAA	-13	NA	92491262	92521823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92491556_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.20	chr13	+	1466	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	448	-3738	intron_retention	FALSE	canonical	3	1135	junction_4	157.942038419162	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGAGACTGGATTATT	NA	False	NA	8	True	TATAAA	-13	NA	92491681	92521823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.21	chr13	+	4530	2	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	13457	-83	13457	83	3prime_fragment	FALSE	canonical	3	1135	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATCATCTCTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	92504690	92525644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92504809_92521232
ES.9726.22	chr13	+	4815	1	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	26138	-3375	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGGCTTTCCTCATC	NA	False	NA	8	True	AATAAA	-11	NA	92517371	92522186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92517400_92522200
ES.9726.23	chr13	+	6154	1	Genic_Genomic	ENSMUSG00000021707.6	novel	NA	NA	NA	NA	33086	4912	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGTGTGCGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	92524319	92530473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_92524300_92530500
ES.9726.3	chr13	+	1721	6	NNC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	29	-7601	intron_retention	TRUE	non_canonical	0	0	junction_1	674.608449398612	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATCTCTTCTGTTTCC	NA	False	NA	NA	False	NA	NA	NA	92491262	92517960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92491538_92491585_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92517485
ES.9726.4	chr13	+	1580	6	NNC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	76	-3394	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	538.171942784088	328	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATGAGCAT	NA	False	NA	-11	True	ACTAAA	-7	NA	92491309	92522167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92491556_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.5	chr13	+	843	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	410	4094	410	-4094	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCAGTGCGTGCTGAG	NA	False	NA	103	True	NA	NA	NA	92491643	92521467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.6	chr13	+	1009	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	411	3927	411	-3927	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCAAGTGGCTCCCCA	NA	False	NA	NA	False	TATAAA	-22	NA	92491644	92521634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.7	chr13	+	1202	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	412	3733	412	-3733	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTGGATTATTGTATG	NA	False	NA	13	True	TATAAA	-18	NA	92491645	92521828	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9726.8	chr13	+	1418	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	419	-3394	combination_of_known_splicesites	TRUE	canonical	3	22	junction_4	636.728896391549	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAAATGAGCAT	NA	False	NA	-11	True	ACTAAA	-7	NA	92491652	92522167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92521232
ES.9726.9	chr13	+	3635	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	420	1292	420	-1292	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACAATATTTGCAGCA	NA	False	NA	NA	False	CATAAA	-28	NA	92491653	92524269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ES.9727.10	chr13	-	3840	24	NNC	ENSMUSG00000014850.16	novel	4254	25	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	4	junction_22	24.2179767316641	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491502	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487869_92489732_92489851_92491270
ES.9727.13	chr13	-	4296	25	NNC	ENSMUSG00000014850.16	novel	4254	25	NA	NA	11	0	intron_retention	FALSE	canonical	0	0	junction_18	31.3510588160733	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491482	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481729_92482866_92483139_92483246_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.14	chr13	-	3112	18	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	36.4404999225049	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491464	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481607_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.15	chr13	-	4376	24	NIC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_18	29.9229002971439	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491457	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481729_92482866_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.16	chr13	-	3778	23	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	25.8266631395854	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491464	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.17	chr13	-	4101	25	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	36.3283396797719	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491514	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92426510_92426671_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487958_92489732_92489851_92491270
ES.9727.18	chr13	-	4012	25	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	31.5131971913708	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491480	92348393	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92429981_92430085_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.20	chr13	-	3550	22	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	13	-2	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_9	26.1980941301924	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGCTCATTGCATGG	NA	False	NA	NA	False	AATAAA	-12	NA	92491480	92348395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.22	chr13	-	3713	22	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	26.2263823134587	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGCTCATTGCATGG	NA	False	NA	NA	False	AATAAA	-12	NA	92491514	92348395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.23	chr13	-	3888	24	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	3	4	junction_17	24.8099010664347	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGCTCATTGCATGG	NA	False	NA	NA	False	AATAAA	-12	NA	92491506	92348395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478876_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.24	chr13	-	3995	25	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	63	-3	intron_retention	FALSE	canonical	0	0	junction_19	34.5331714523233	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTGCTCATTGCATG	NA	False	NA	NA	False	AATAAA	-11	NA	92491398	92348396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481729_92483077_92483139_92483246_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.25	chr13	-	4050	25	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	34.7352836544565	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTGCTCATTGCATG	NA	False	NA	NA	False	AATAAA	-11	NA	92491502	92348396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92469256_92469382_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.26	chr13	-	3770	23	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	-3	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.8790894879876	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTTGCTCATTGCAT	NA	False	NA	NA	False	AATAAA	-10	NA	92491514	92348397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.27	chr13	-	4466	16	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	7120	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	44.5176619132477	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTTGCTCATTGCAT	NA	False	NA	NA	False	AATAAA	-10	NA	92438845	92348397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92426510_92426671_92435660_92435771_92436781_92437260_92437323
ES.9727.28	chr13	-	3875	24	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	29.9229002971439	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTTGCTCATTGCAT	NA	False	NA	NA	False	AATAAA	-10	NA	92491457	92348397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481599_92483233_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.29	chr13	-	3635	22	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	25.0893189007293	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATACTTGCTCATTGC	NA	False	NA	NA	False	AATAAA	-8	NA	92491482	92348399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.3	chr13	-	3975	24	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	-26	3	at_least_one_novel_splicesite	FALSE	non_canonical	3	70	junction_22	15.2047152173041	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATGGCGTATTGTATT	NA	False	NA	NA	False	AATAAA	-23	NA	92491537	92348384	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.30	chr13	-	3656	24	NNC	ENSMUSG00000014850.16	novel	4254	25	NA	NA	-115	-6	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_23	31.1834016242937	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATACTTGCTCATTGC	NA	False	NA	NA	False	AATAAA	-8	NA	92491138	92348399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487869_92489732_92489851_92491084
ES.9727.31	chr13	-	2527	16	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	8316	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	30.2784118180301	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATACTTGCTCATTGC	NA	False	NA	NA	False	AATAAA	-8	NA	92473570	92348399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92473547
ES.9727.32	chr13	-	3607	23	NNC	ENSMUSG00000014850.16	novel	4254	25	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	36.9785508523589	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATACTTGCTCATTGC	NA	False	NA	NA	False	AATAAA	-8	NA	92491488	92348399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352106_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487869_92489732_92489851_92491270
ES.9727.33	chr13	-	3786	1	Intergenic	novelGene_8127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAAATCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92407082	92403296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_92403300_92407100
ES.9727.34	chr13	-	4220	13	NNC	ENSMUSG00000014850.16	novel	4137	8	NA	NA	-2	18149	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	29.1960566210956	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCCTCCA	NA	False	NA	NA	False	NA	NA	NA	92491495	92425855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92428352_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.35	chr13	-	6312	2	NNC	ENSMUSG00000014850.16	novel	625	3	NA	NA	-3410	1018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTAAAAAAAAAAAAAAAAAG	1891	False	NA	NA	False	AATATA	-2	NA	92449375	92442986	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92448441_92448517
ES.9727.36	chr13	-	4291	1	FSM	ENSMUSG00000014850.16	ENSMUST00000190462.2	1961	1	-2283	-47	-2283	47	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGGAAAGAAAGAGCGA	3018	False	NA	NA	False	NA	NA	NA	92448248	92443957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92444000_92448200
ES.9727.37	chr13	-	3464	10	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	70	junction_8	11.5448668514316	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	92491481	92444003	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.38	chr13	-	1812	10	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	3	70	junction_8	11.5448668514316	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACCAAATTGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	92491513	92445687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.39	chr13	-	7295	7	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	15	-1	intron_retention	FALSE	non_canonical	0	0	junction_1	49.8553463086513	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTACCAAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	92491478	92445688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92446068_92478753_92481608_92483238_92483359_92483836_92484550_92484936_92485846_92487738_92489851_92491270
ES.9727.4	chr13	-	3901	24	NNC	ENSMUSG00000014850.16	novel	3946	24	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.082397295001	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCATGGCGTATTGTA	NA	False	NA	NA	False	AATAAA	-21	NA	92491509	92348386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352106_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ES.9727.40	chr13	-	449	1	Intergenic	novelGene_8128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	92473040	92472591	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_92472600_92473000
ES.9727.5	chr13	-	3760	24	NNC	ENSMUSG00000014850.16	novel	3937	24	NA	NA	-119	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	1	junction_23	29.9200573172525	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCATGGCGTATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	92491142	92348387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481608_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491084
ES.9727.7	chr13	-	4055	9	FSM	ENSMUSG00000014850.16	ENSMUST00000191304.7	1796	9	-2260	1	-2260	0	multi-exon	FALSE	canonical	3	90	junction_5	12.6589889011722	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATTGCATGGCGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	92404840	92348389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434
ES.9727.8	chr13	-	3856	24	NNC	ENSMUSG00000014850.16	novel	4254	25	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	35.5270338239085	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATTGCATGGCGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	92491505	92348389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92349055_92351969_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481609_92483238_92483359_92483836_92483954_92485656_92485846_92487738_92487869_92489732_92489851_92491270
ES.9728.1	chr13	+	787	1	ISM	ENSMUSG00000045034.13	ENSMUST00000061594.13	4013	5	14967	9	14205	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATCATTTTGACTAAG	1587	False	NA	NA	False	AATAAA	-6	NA	92577370	92578157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92577400_92578200
ES.9729.1	chr13	-	1287	6	FSM	ENSMUSG00000034334.9	ENSMUST00000040106.9	1152	6	43	-178	43	-30	multi-exon	FALSE	canonical	1	2	junction_4	1.62480768092719	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTGAATTAATAAATGAA	NA	False	NA	NA	False	NA	NA	NA	92620478	92586162	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92586761_92603484_92603621_92604452_92604671_92610470_92610637_92614335_92614462_92620435
ES.973.1	chr1	+	176	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88495213	88495389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88495200_88495400
ES.9730.1	chr13	+	5843	1	Antisense	novelGene_ENSMUSG00000021706.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGACAAAGAAAAATGTC	NA	False	NA	NA	False	TTTAAA	-39	NA	92660675	92666518	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_92660700_92666500
ES.9731.1	chr13	-	2671	1	Genic_Genomic	ENSMUSG00000021706.15	novel	NA	NA	NA	NA	21028	1210	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTATTCTAGGTTTGA	NA	False	NA	NA	False	AATAAA	-11	NA	92625076	92622405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_92622400_92625100
ES.9731.10	chr13	-	5912	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	46	192	46	-192	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTGTGTAAGAAGGAT	NA	False	NA	NA	False	ATTAAA	-36	NA	92667330	92623807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.11	chr13	-	2983	12	NNC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	-2204	-208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	12.4189937176358	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGTCACACTAAATAAC	NA	False	NA	NA	False	ATTAAA	-20	NA	92648308	92623823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636796_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985
ES.9731.12	chr13	-	5747	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	29	-212	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGGAAGTCACACTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	92667347	92623827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.13	chr13	-	5323	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	37	111	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCATTCTTTTTCTCCTTC	NA	False	NA	NA	False	TATAAA	-41	NA	92667339	92624243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.14	chr13	-	5468	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	49	633	49	106	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGCATTCTTTTTCT	NA	False	NA	NA	False	TATAAA	-36	NA	92667327	92624248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.15	chr13	-	4373	14	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	-1130	94	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	12.9706085589895	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTGTATCACAGTG	NA	False	NA	NA	False	TATAAA	-24	NA	92659296	92624260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623
ES.9731.16	chr13	-	5368	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	47	735	47	4	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGCTTCTCTATTTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	92667329	92624350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.17	chr13	-	5210	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	36	-3	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGACTTTATGCTTCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	92667340	92624357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.18	chr13	-	5264	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	37	849	37	-110	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTAGAATTTTGCCTT	NA	False	NA	NA	False	TATAAA	-45	NA	92667339	92624464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.19	chr13	-	5058	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	37	-154	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGAAGACCTACCTCC	NA	False	NA	NA	False	AATAAA	-23	NA	92667339	92624508	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.2	chr13	-	5345	16	ISM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	8953	-890	-257	890	3prime_fragment	FALSE	canonical	3	21	junction_14	8.3495841546484	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTTGTGTAGGTTCCT	NA	False	NA	NA	False	AATAAA	-11	NA	92658423	92622725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623
ES.9731.20	chr13	-	5602	17	ISM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	49	4378	49	-3639	5prime_fragment	FALSE	canonical	3	21	junction_13	7.253232038202	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGAGTCTCAATCTAAA	NA	False	NA	NA	False	AATATA	-24	NA	92667327	92627993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.3	chr13	-	6455	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	28	-333	28	333	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTAAGACGACTTTT	NA	False	NA	NA	False	AGTAAA	-44	NA	92667348	92623282	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.4	chr13	-	6245	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	69	326	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTATGGTCTTAAGAC	NA	False	NA	NA	False	AGTAAA	-37	NA	92667307	92623289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.5	chr13	-	6204	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	36	-90	36	90	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGTGGAAGGGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	92667340	92623525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.6	chr13	-	6180	18	NNC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	49	85	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	10.7491047345886	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCAAATAGTGGAAGGGT	NA	False	NA	NA	False	NA	NA	NA	92667327	92623530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636796_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.7	chr13	-	5947	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	48	7	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTACATAATTTGTT	NA	False	NA	NA	False	TATAAA	-22	NA	92667328	92623608	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.8	chr13	-	5915	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	22	4	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	12.5173317344393	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGTTTACATAATTT	NA	False	NA	NA	False	TATAAA	-19	NA	92667354	92623611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644800_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9731.9	chr13	-	6136	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	0	14	0	-14	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTACATATCAGGCTC	NA	False	NA	NA	False	AATAAA	-30	NA	92667376	92623629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ES.9732.1	chr13	+	180	1	Intergenic	novelGene_8129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATCCAGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	92741928	92742108	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_92741900_92742100
ES.9733.1	chr13	+	5396	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	-30	0	-30	0	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTTTGTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	92747568	92848455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.10	chr13	+	4800	9	NNC	ENSMUSG00000021703.10	novel	5366	12	NA	NA	-22405	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.0416089564913	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCATGTTGTTTGTTT	8080	False	NA	0	True	AATAAA	-10	NA	92819884	92848450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92819947_92821645_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.11	chr13	+	4180	1	NIC	ENSMUSG00000021703.10	novel	5366	12	NA	NA	1981	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCATGTTGTTTGTTT	NA	False	NA	0	True	AATAAA	-10	NA	92844270	92848450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92844300_92848400
ES.9733.2	chr13	+	5351	12	NNC	ENSMUSG00000021703.10	novel	5366	12	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	12.8365439080826	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGTTTTC	NA	False	NA	2	True	AATAAA	-12	NA	92747598	92848452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_92747796_92797525_92797682_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.4	chr13	+	5268	11	NIC	ENSMUSG00000021703.10	novel	5366	12	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	14.813507349713	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGTTTTC	NA	False	NA	2	True	AATAAA	-12	NA	92747599	92848452	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.5	chr13	+	1506	11	ISM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	2	5566	2	-1912	5prime_fragment	FALSE	canonical	3	40	junction_8	5.25737577123797	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTGAAGTCAATCTGT	NA	False	NA	NA	False	NA	NA	NA	92747600	92842889	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647
ES.9733.6	chr13	+	2487	2	ISM	ENSMUSG00000021703.10	ENSMUST00000224250.2	1596	5	-41	22844	-41	-22844	5prime_fragment	FALSE	canonical	3	49	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAAATTCCCTGAGGC	NA	False	NA	NA	False	NA	NA	NA	92747640	92799857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92747796_92797525
ES.9733.7	chr13	+	5479	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	42	-155	-41	155	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTTAAGGCCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	92747640	92848610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.8	chr13	+	2866	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	85	2415	2	1239	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGGAGAGCTTGTCTGG	NA	False	NA	NA	False	AAGAAA	-12	NA	92747683	92846040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ES.9733.9	chr13	+	204	1	Intergenic	novelGene_8130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCAAGCTCAATGTT	5599	False	NA	NA	False	NA	NA	NA	92780623	92780827	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_92780600_92780800
ES.9734.1	chr13	-	166	1	Intergenic	novelGene_8131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	92841245	92841079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_92841100_92841200
ES.9735.1	chr13	+	176	1	Intergenic	novelGene_8132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92953522	92953698	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_92953500_92953700
ES.9736.1	chr13	+	4353	1	ISM	ENSMUSG00000021704.9	ENSMUST00000076169.4	6275	9	9087	4	8676	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTCTTGGTGTATATCA	NA	False	NA	23	True	AATAAA	-24	NA	92990381	92994734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92990400_92994700
ES.9736.2	chr13	+	1791	1	ISM	ENSMUSG00000021704.9	ENSMUST00000076169.4	6275	9	9731	1922	9320	-1922	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAACCTAATAGAG	NA	False	NA	NA	False	NA	NA	NA	92991025	92992816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_92991000_92992800
ES.9737.1	chr13	-	1053	1	Antisense	novelGene_ENSMUSG00000021704.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	AATATA	-31	NA	92992642	92991589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_92991600_92992600
ES.9738.1	chr13	+	169	1	Intergenic	novelGene_8133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTGTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	93213442	93213611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93213400_93213600
ES.9739.1	chr13	-	4121	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-145	-986	-43	985	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTCTTTCTAACCGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	93328936	93281804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.10	chr13	-	3150	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-68	-1	-68	1	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGAGGTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	93328961	93282788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.11	chr13	-	3216	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	146.35202614093	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328908	93282789	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93284873_93284982_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.12	chr13	-	3383	17	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	166.573744929986	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328909	93282790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93312860_93312972_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.13	chr13	-	3135	15	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	120.33204486091	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328939	93282790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291563_93296148_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.15	chr13	-	3263	16	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	149.683666443604	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328900	93282790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.16	chr13	-	4519	4	FSM	ENSMUSG00000042167.7	ENSMUST00000223975.2	502	4	-2682	-1335	-2682	0	multi-exon	FALSE	canonical	3	367	junction_3	54.3650214343336	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93294396	93282790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432
ES.9739.18	chr13	-	3683	3	ISM	ENSMUSG00000042167.7	ENSMUST00000223975.2	502	4	2302	-1334	2302	-1	3prime_fragment	FALSE	canonical	3	407	junction_2	45	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGTTGAGGTGTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	93289412	93282791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93284174_93285388_93285469_93287191
ES.9739.19	chr13	-	3118	15	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-46	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	146.299960941309	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGTTGAGGTGTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	93328939	93282791	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285471_93287200_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.2	chr13	-	6849	14	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-25	984	intron_retention	FALSE	canonical	3	135	junction_4	94.2995353480806	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGTCTTTCTAACCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328918	93281805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.20	chr13	-	3146	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	161.140711457064	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	93328898	93282793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
ES.9739.21	chr13	-	3181	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	168.24960293828	344	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	93328905	93282793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93284873_93284968_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311149_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.22	chr13	-	3230	16	NIC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	11	-3	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	158.040360527163	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	93328882	93282793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.24	chr13	-	4591	5	ISM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	29737	3	5883	-3	3prime_fragment	FALSE	canonical	3	135	junction_4	133.569270418012	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	93299054	93282793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152
ES.9739.25	chr13	-	3336	17	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-15	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	176.974563408841	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATTGTTGAGGTGTTA	NA	False	NA	NA	False	AATAAA	-10	NA	93328908	93282793	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313771_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
ES.9739.26	chr13	-	5836	14	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-1	-4	intron_retention	FALSE	canonical	3	135	junction_4	94.2995353480806	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACATTGTTGAGGTGTT	NA	False	NA	NA	False	AATAAA	-9	NA	93328894	93282794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.27	chr13	-	3004	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-102	88	0	-88	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGACTTACAAAGGGTGC	NA	False	NA	NA	False	ATTAAA	-20	NA	93328893	93282878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.28	chr13	-	2643	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	2	345	2	-345	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTAGTATTTCTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	93328789	93283135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.29	chr13	-	2164	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-213	1039	-111	296	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATAAGGTTTTGATAT	NA	False	NA	NA	False	CATAAA	-23	NA	93329004	93283829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.3	chr13	-	3927	15	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	177	984	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	130.406761593821	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGTCTTTCTAACCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328442	93281805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300
ES.9739.30	chr13	-	2029	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-49	1101	-49	235	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTAGTAGTATTATGG	NA	False	NA	NA	False	AATAAA	-40	NA	93328942	93283890	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.31	chr13	-	5344	14	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-15	217	intron_retention	FALSE	canonical	3	135	junction_4	94.0126517987066	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAAATGTTTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	93328908	93283908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.32	chr13	-	2702	16	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-49	217	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_12	160.014943746583	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAAATGTTTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	93328942	93283908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93284873_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.34	chr13	-	3197	14	NIC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-21	216	intron_retention	FALSE	canonical	3	122	junction_8	111.635660566233	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGAAAATGTTTACA	NA	False	NA	NA	False	AATAAA	-21	NA	93328914	93283909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.35	chr13	-	3207	14	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-21	214	intron_retention	FALSE	canonical	3	135	junction_3	89.8350230196817	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTGAAAATGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	93328914	93283911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.36	chr13	-	4881	15	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	1	214	intron_retention	FALSE	canonical	3	17	junction_11	151.635926091519	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTGAAAATGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	93328892	93283911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.37	chr13	-	2052	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-33	210	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_15	161.140711457064	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTATTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	93328926	93283915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
ES.9739.39	chr13	-	2071	16	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-13	207	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	146.924863639738	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328906	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93284873_93284968_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.4	chr13	-	3956	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	109	-984	7	984	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGTCTTTCTAACCGTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328784	93281805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.42	chr13	-	2008	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-3	207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	162.509432204889	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328896	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93310894_93310948_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.43	chr13	-	5288	15	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-13	207	intron_retention	FALSE	canonical	2	4	junction_14	180.552101135627	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328906	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304976_93308330_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
ES.9739.44	chr13	-	1910	14	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-5	207	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	161.735594001024	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328898	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320822_93322315_93322406_93322810_93322985_93328601
ES.9739.47	chr13	-	2033	16	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-7	207	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	149.683666443604	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328798	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.49	chr13	-	2205	17	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-13	207	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_16	176.116394395865	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328906	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328300_93328365_93328601
ES.9739.5	chr13	-	4244	16	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-4	983	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	149.683666443604	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCCGTCTTTCTAACCGT	NA	False	NA	NA	False	AATAAA	-12	NA	93328897	93281806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.51	chr13	-	4041	3	ISM	ENSMUSG00000042167.7	ENSMUST00000223975.2	502	4	817	-207	817	207	3prime_fragment	FALSE	canonical	3	407	junction_2	45	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93290897	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93284174_93285388_93285469_93287191
ES.9739.52	chr13	-	1793	13	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-35	207	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	137.800857721891	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328928	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.53	chr13	-	1705	13	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-5	207	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	139.81346700356	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328898	93283918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93328601
ES.9739.55	chr13	-	2259	17	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-21	206	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	166.573744929986	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAAATGTATTTTTGAA	NA	False	NA	NA	False	AATAAA	-11	NA	93328914	93283919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93312860_93312972_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.56	chr13	-	1872	15	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-49	81	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	141.828079313064	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTTTGTTTACCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	93328942	93284044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320822_93322315_93322406_93322810_93322985_93328601
ES.9739.57	chr13	-	1950	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	-16	81	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	154.522001310133	339	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCATTTTGTTTACCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	93328909	93284044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93284873_93284982_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.58	chr13	-	2000	16	NIC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	0	79	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	149.683666443604	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCATTTTGTTTACCT	NA	False	NA	NA	False	AATAAA	-17	NA	93328893	93284046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.6	chr13	-	3534	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-117	-427	-15	426	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGACTCTTGCATTGC	NA	False	NA	NA	False	AATAAA	-18	NA	93328908	93282363	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.60	chr13	-	1837	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-103	1256	-1	79	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTCATTTTGTTTACCT	NA	False	NA	NA	False	AATAAA	-17	NA	93328894	93284046	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.61	chr13	-	3254	11	ISM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-135	11541	-33	0	5prime_fragment	FALSE	canonical	3	224	junction_1	66.4457673595542	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTAGTTGGTTATGAT	NA	False	NA	NA	False	AATAAA	-24	NA	93328926	93294331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.62	chr13	-	5481	10	ISM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	-15	17522	-15	-5980	5prime_fragment	FALSE	canonical	3	122	junction_4	97.6605357701543	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTCTGAGTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	93328908	93300311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.63	chr13	-	2197	12	NNC	ENSMUSG00000042167.7	novel	821	4	NA	NA	27	-5981	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	178.730000903991	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTTTTTCTGAGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	93328866	93300312	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93301013_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313771_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.64	chr13	-	5472	10	ISM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-98	17523	4	-5982	5prime_fragment	FALSE	canonical	3	342	junction_4	38.5643601858401	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTTTTTTTCTGAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	93328889	93300313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.65	chr13	-	6556	8	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	66	-8425	intron_retention	FALSE	canonical	3	342	junction_2	39.7953950776689	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTTAAGATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	93328725	93302756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.7	chr13	-	3316	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-313	-13	-211	12	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTTTCTGTGCAGTTG	NA	False	NA	NA	False	AATAAA	-26	NA	93329104	93282777	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.8	chr13	-	3386	17	NNC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	-5	4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	177.635148812812	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGTGTTATTTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	93328898	93282785	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93294605_93294722_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313771_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ES.9739.9	chr13	-	3090	15	NIC	ENSMUSG00000042167.7	novel	2990	15	NA	NA	31	1	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	130.406761593821	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGAGGTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	93328588	93282788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328300
ES.974.1	chr1	+	174	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAAAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	88524336	88524510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88524300_88524500
ES.9740.1	chr13	-	218	1	Intergenic	novelGene_8134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAATAATTCCAGATGT	NA	False	NA	NA	False	NA	NA	NA	93333365	93333147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_93333100_93333400
ES.9741.1	chr13	+	3791	1	Intergenic	novelGene_8135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGGTTTGTTGCGTC	NA	False	NA	NA	False	NA	NA	NA	93335417	93339208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93335400_93339200
ES.9742.1	chr13	+	174	1	Intergenic	novelGene_8136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93402847	93403021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93402800_93403000
ES.9743.1	chr13	-	1377	3	Antisense	novelGene_ENSMUSG00000098092.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCTAGAGGGGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	93440174	93430114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_93431006_93433630_93433903_93439960
ES.9744.1	chr13	+	6545	5	FSM	ENSMUSG00000007617.19	ENSMUST00000102752.10	5713	5	-768	-64	-30	64	multi-exon	FALSE	canonical	3	39	junction_1	6.83282518435822	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTCTTTTTCTAAG	NA	False	NA	81	True	AATAAA	-20	NA	93440234	93497034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447
ES.9744.10	chr13	+	5110	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1158	-1187	-101	-152	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTACTTGATCGTCTCCT	NA	False	NA	22	True	AATACA	-34	NA	93440508	93541485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.12	chr13	+	2664	6	FSM	ENSMUSG00000007617.19	ENSMUST00000109493.9	2580	6	-92	8	-92	-8	multi-exon	FALSE	canonical	0	0	junction_5	19.2935222289762	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACGTCTGGGTTTCCCT	NA	False	NA	NA	False	AATAAA	-10	NA	93440517	93503634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93502785
ES.9744.13	chr13	+	3847	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-789	-6	-92	6	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCACTCAAACAGATTC	NA	False	NA	NA	False	AATACA	-22	NA	93440517	93540195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.14	chr13	+	4142	6	NNC	ENSMUSG00000007617.19	novel	1533	6	NA	NA	-47	64	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	19.2935222289762	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTTCTTTTTCTAAG	NA	False	NA	81	True	AATAAA	-20	NA	93440562	93497034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492537_93494611
ES.9744.15	chr13	+	5448	5	FSM	ENSMUSG00000007617.19	ENSMUST00000102752.10	5713	5	-427	692	-34	-692	multi-exon	FALSE	canonical	3	39	junction_1	6.83282518435822	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTAAAATTATTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93440575	93496278	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447
ES.9744.16	chr13	+	5205	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-705	-1448	-8	0	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCCTGGAAAATTAGT	NA	False	NA	7	True	CATAAA	-17	NA	93440601	93541637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.17	chr13	+	6176	1	NIC	ENSMUSG00000007617.19	novel	2468	6	NA	NA	9	-31626	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATCTTAAAAATAACAACA	NA	False	NA	NA	False	NA	NA	NA	93440618	93446794	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_93440600_93446800
ES.9744.18	chr13	+	4062	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-688	-322	9	213	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATTTTGAAAACATATG	NA	False	NA	NA	False	AATAAA	-15	NA	93440618	93540511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.2	chr13	+	4593	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1397	-431	5	431	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGTGATCATTTAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	93440269	93540729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.20	chr13	+	9152	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-676	-5424	21	3976	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	93440630	93545613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.21	chr13	+	3838	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-676	-110	21	1	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAGTTTCTACAGTAA	NA	False	NA	NA	False	AATAAA	-13	NA	93440630	93540299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.22	chr13	+	3824	9	ISM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	36956	-1275	33721	-173	3prime_fragment	FALSE	canonical	0	0	junction_5	17.7746307978534	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTTGTTCTCTGGA	NA	False	NA	1	True	AATACA	-13	NA	93478262	93541464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.23	chr13	+	2931	8	ISM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	41768	-538	38533	429	3prime_fragment	FALSE	canonical	0	0	junction_4	16.630436812406	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATAGTGATCATTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	93483074	93540727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.24	chr13	+	2060	5	ISM	ENSMUSG00000007617.19	ENSMUST00000079086.8	4287	9	47974	1450	47974	-2	3prime_fragment	FALSE	canonical	3	36	junction_4	2.87228132326901	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATCTTTCTCACTCAA	NA	False	NA	NA	False	AATACA	-14	NA	93492515	93540187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.25	chr13	+	1840	1	NIC	ENSMUSG00000007617.19	novel	2580	6	NA	NA	57252	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAACGTCTGGGTTTCCC	NA	False	NA	NA	False	AATAAA	-9	NA	93501793	93503633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_93501800_93503600
ES.9744.3	chr13	+	5500	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1396	-1339	6	0	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCCTGGAAAATTAGT	NA	False	NA	7	True	CATAAA	-17	NA	93440270	93541637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.4	chr13	+	4387	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1395	-227	7	227	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGATTTTATCTATGAG	NA	False	NA	NA	False	AATAAA	-29	NA	93440271	93540525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.5	chr13	+	5186	10	NNC	ENSMUSG00000007617.19	novel	3052	10	NA	NA	-143	-169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.7452916719373	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTTCTCTGGAGAAT	NA	False	NA	5	True	AATACA	-17	NA	93440466	93541468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93441811_93478263_93478421_93483076_93483209_93485697_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.6	chr13	+	4403	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-811	-540	-114	431	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGTGATCATTTAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	93440495	93540729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.7	chr13	+	3940	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1168	-7	-111	7	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTACAGTAAGGTGTC	NA	False	NA	NA	False	AATAAA	-19	NA	93440498	93540305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9744.8	chr13	+	6232	5	NNC	ENSMUSG00000007617.19	novel	5713	5	NA	NA	-111	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.3585462988472	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTAGTATATTGATTTT	NA	False	NA	17	True	ATTAAA	-17	NA	93440498	93496970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93441811_93478263_93478421_93483076_93483209_93485697_93485806_93492447
ES.9744.9	chr13	+	5132	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-798	-1282	-101	-166	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGAGAATGTA	NA	False	NA	8	True	AATACA	-20	NA	93440508	93541471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ES.9745.1	chr13	-	5571	2	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	60122	-4	60051	4	3prime_fragment	FALSE	canonical	2	5	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTGTTTGTTTATA	NA	False	NA	NA	False	AATAAA	-20	NA	93576194	93566604	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93571928_93575946
ES.9745.2	chr13	-	4053	11	FSM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	1462	3261	1391	-3261	multi-exon	TRUE	canonical	0	0	junction_8	1.62788205960997	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCATTGTGTTGTACT	2949	False	NA	NA	False	AATATA	-8	NA	93634854	93569869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93571928_93575946_93576258_93577522_93578130_93579093_93579190_93589314_93589402_93589895_93590084_93590435_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
ES.9745.3	chr13	-	5017	11	FSM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	-32	3791	-32	-3791	multi-exon	FALSE	canonical	0	0	junction_8	1.62788205960997	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGATGATCTGTGTGT	1455	False	NA	NA	False	ATTAAA	-24	NA	93636348	93570399	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93571928_93575946_93576258_93577522_93578130_93579093_93579190_93589314_93589402_93589895_93590084_93590435_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
ES.9745.4	chr13	-	5468	4	ISM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	9	26044	9	7432	5prime_fragment	FALSE	canonical	0	0	junction_1	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTGCCCTTGAA	1496	False	NA	NA	False	ATTAAA	-11	NA	93636307	93592652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_93596298_93601074_93601226_93609128_93609303_93634809
ES.9745.5	chr13	-	5444	1	Genic_Genomic	ENSMUSG00000021690.11	novel	NA	NA	NA	NA	-59	-30847	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGAAAAGGGTCTTGG	1428	False	NA	NA	False	NA	NA	NA	93636375	93630931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_93630900_93636400
ES.9745.6	chr13	-	4465	1	Genic_Genomic	ENSMUSG00000021690.11	novel	NA	NA	NA	NA	-5	-31772	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTCTCGACTTGTTACAC	1482	False	NA	NA	False	NA	NA	NA	93636321	93631856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_93631900_93636300
ES.9746.1	chr13	+	172	1	Intergenic	novelGene_8137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGGACAGGCTT	NA	False	NA	NA	False	NA	NA	NA	93700059	93700231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93700100_93700200
ES.9747.1	chr13	+	173	1	Intergenic	novelGene_8138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	93751464	93751637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93751500_93751600
ES.9748.1	chr13	+	178	1	Intergenic	novelGene_8140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCAGTATTATA	NA	False	NA	NA	False	NA	NA	NA	93766577	93766755	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93766600_93766800
ES.9749.1	chr13	-	1956	8	FSM	ENSMUSG00000074768.7	ENSMUST00000099309.6	2490	8	316	218	-79	-218	multi-exon	FALSE	canonical	1	3	junction_5	5.15474815790535	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTGGTCCATTAA	NA	False	NA	NA	False	AATAAA	-28	NA	93774153	93753400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_93754171_93756589_93756819_93757901_93758085_93761321_93761470_93761804_93761997_93763754_93763874_93769743_93769877_93773971
ES.9749.2	chr13	-	171	1	Intergenic	novelGene_8139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	93755543	93755372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_93755400_93755500
ES.975.1	chr1	-	207	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTGGAGAGGTGGTT	NA	False	NA	NA	False	NA	NA	NA	88531312	88531105	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88531100_88531300
ES.9750.1	chr13	+	3004	16	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	-194	-178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.75706741429476	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCTTTTTATTACT	2280	False	NA	NA	False	AATGAA	-25	NA	93810746	93889163	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93811041_93813546_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.10	chr13	+	3376	8	ISM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	29537	33007	-7569	7658	internal_fragment	FALSE	canonical	2	10	junction_3	2.05038572777247	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTGTTTGTGAAACA	NA	False	NA	NA	False	ATTAAA	-21	NA	93840477	93856334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062
ES.9750.2	chr13	+	1749	7	ISM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	-183	45624	-183	-4959	5prime_fragment	FALSE	canonical	2	5	junction_1	2.98607881119482	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTCTAACGTGATTTA	2291	False	NA	NA	False	NA	NA	NA	93810757	93843717	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138
ES.9750.3	chr13	+	3000	16	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	-9	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	4.04420023682749	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGACAGGGACAGACTTG	2465	False	NA	NA	False	AATAAA	-23	NA	93810931	93889336	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845848_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.4	chr13	+	3325	15	NIC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	-8	-14	intron_retention	FALSE	canonical	2	5	junction_1	2.94507544686976	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATGCAATGACAGGG	2466	False	NA	NA	False	AATAAA	-14	NA	93810932	93889327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.5	chr13	+	2625	15	NIC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	4	-194	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.8438925848782	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTTTTATTACTTTT	2478	False	NA	NA	False	AATGAA	-9	NA	93810944	93889147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_93811041_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.7	chr13	+	2688	15	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	9103	-190	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.26662414944802	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTATTACTTTTATTG	NA	False	NA	NA	False	AATGAA	-13	NA	93820043	93889151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93820198_93823435_93823535_93825032_93825198_93828379_93828585_93840293_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.8	chr13	+	2788	15	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	9181	-11	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.06394436993246	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGCAATGACAGGGACA	NA	False	NA	NA	False	AATAAA	-17	NA	93820121	93889330	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93820198_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ES.9750.9	chr13	+	2124	12	NNC	ENSMUSG00000042102.8	novel	2992	16	NA	NA	9183	5680	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.0775110690565	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTCCCCTGCCTCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	93820123	93854356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_93820198_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062
ES.9751.1	chr13	-	2017	9	NNC	ENSMUSG00000042118.8	novel	2467	8	NA	NA	12	-540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.91475908216049	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGAGTAGCTTGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	93810798	93792767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93803901_93804004_93805762_93805855_93807920_93808054_93810745
ES.9751.2	chr13	-	2020	8	NNC	ENSMUSG00000042118.8	novel	2467	8	NA	NA	-4626	-540	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	5.06287004190553	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGAGTAGCTTGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	93815436	93792767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920_93808054_93815278
ES.9752.1	chr13	+	4005	8	FSM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	33	0	33	0	multi-exon	FALSE	canonical	0	0	junction_4	3.27014946921703	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTTGGACATGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	93908170	94079524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_93908601_93926546_93926734_93930535_93930727_93944003_93944212_93998594_93998839_94016995_94017067_94075734_94075858_94076973
ES.9752.2	chr13	+	4301	1	Intergenic	novelGene_8141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTTATTTTGTCCCTCC	NA	False	NA	NA	False	NA	NA	NA	93948480	93952781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_93948500_93952800
ES.9753.1	chr13	+	4909	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-560	-1	-560	1	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	1666	False	NA	10	True	ATTAAA	-19	NA	94193743	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
ES.9753.10	chr13	+	4679	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-135	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0929228528305	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2091	False	NA	10	True	ATTAAA	-19	NA	94194168	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94254342_94254538_94257284_94257344_94310530_94311147_94328355
ES.9753.11	chr13	+	4568	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-135	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.5998826289463	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2091	False	NA	10	True	ATTAAA	-19	NA	94194168	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94200262_94200347_94257284_94257344_94310530_94311147_94328355
ES.9753.12	chr13	+	4712	6	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-77	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	38.5050646019455	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCTTTCAAGTTTGT	2149	False	NA	5	True	ATTAAA	-14	NA	94194226	94331913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94257284_94257344_94271247_94271432_94283922_94284030_94310530_94311147_94328355
ES.9753.13	chr13	+	4457	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.0929228528305	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCTTTCAAGTTTGTT	2229	False	NA	6	True	ATTAAA	-15	NA	94194306	94331914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94231307_94231423_94257284_94257344_94310530_94311147_94328355
ES.9753.14	chr13	+	4433	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	40.4250850339242	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	1	True	NA	10	True	ATTAAA	-19	NA	94194317	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94215184_94215283_94257284_94257344_94310530_94311147_94328355
ES.9753.15	chr13	+	4689	7	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.9235380307017	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	23	False	NA	10	True	ATTAAA	-19	NA	94194339	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94212562_94212646_94215184_94215283_94254342_94254538_94257284_94257344_94310530_94311147_94328355
ES.9753.16	chr13	+	2186	4	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	4	29079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	39.7184535896799	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCTTGTGTTTATTT	27	False	NA	NA	False	AATAAA	-13	NA	94194343	94360996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94257284_94257344_94310530_94311147_94359556
ES.9753.17	chr13	+	4782	6	NNC	ENSMUSG00000045312.13	novel	488	2	NA	NA	4986	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.8345724017145	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTTTCAAGTTTGTTG	5009	False	NA	7	True	ATTAAA	-16	NA	94199325	94331915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94199605_94200262_94200347_94257284_94257344_94271247_94271432_94310530_94311147_94328355
ES.9753.18	chr13	+	4613	5	NNC	ENSMUSG00000045312.13	novel	4209	2	NA	NA	5008	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.3465791600852	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	5031	False	NA	10	True	ATTAAA	-19	NA	94199347	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94199605_94257284_94257344_94271313_94271432_94310530_94311147_94328355
ES.9753.19	chr13	+	4469	4	NNC	ENSMUSG00000045312.13	novel	4209	2	NA	NA	5031	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	40.6721307804524	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTTTCAAGTTTGTTG	5054	False	NA	7	True	ATTAAA	-16	NA	94199370	94331915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94199605_94257284_94257344_94310530_94311147_94328355
ES.9753.2	chr13	+	3716	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	-155	787	-155	105	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTATGTATGTTTTCTT	2071	False	NA	NA	False	AATAGA	-14	NA	94194148	94331130	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
ES.9753.20	chr13	+	3685	2	NNC	ENSMUSG00000045312.13	novel	3273	2	NA	NA	3045	10633	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGCTTAAACTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	94257494	94271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94260766_94270701
ES.9753.21	chr13	+	5667	1	Intergenic	novelGene_8142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGCTTAAACTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	94265448	94271115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94265400_94271100
ES.9753.22	chr13	+	4500	2	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	15915	104	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTATGTATGTTTTCT	NA	False	NA	NA	False	AATAGA	-13	NA	94326414	94331129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94328141_94328355
ES.9753.3	chr13	+	4444	3	NIC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-155	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	41	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2071	False	NA	9	True	ATTAAA	-18	NA	94194148	94331917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94194415_94310530_94311147_94328355
ES.9753.4	chr13	+	4674	6	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-144	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	39.8276286012612	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2082	False	NA	10	True	ATTAAA	-19	NA	94194159	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94212562_94212646_94215184_94215283_94257284_94257344_94310530_94311147_94328355
ES.9753.5	chr13	+	2577	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-143	29080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.0022320835453	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGCTTGTGTTTATTTA	2083	False	NA	NA	False	AATAAA	-14	NA	94194160	94360997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94257284_94257344_94310530_94311147_94350803_94351011_94359556
ES.9753.6	chr13	+	4570	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-142	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.1188793773054	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTCTTTCAAGTTTGTT	2084	False	NA	6	True	ATTAAA	-15	NA	94194161	94331914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94212562_94212646_94257284_94257344_94310530_94311147_94328355
ES.9753.7	chr13	+	3874	3	NIC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-141	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	38.5	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2085	False	NA	10	True	ATTAAA	-19	NA	94194162	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94194415_94257284_94257344_94328355
ES.9753.9	chr13	+	4668	5	NNC	ENSMUSG00000045312.13	novel	4348	4	NA	NA	-135	1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37.0843632815773	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	2091	False	NA	10	True	ATTAAA	-19	NA	94194168	94331918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94194415_94257284_94257344_94271247_94271432_94310530_94311147_94328355
ES.9754.1	chr13	+	1051	1	Antisense	novelGene_ENSMUSG00000021687.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAAAATTCTGTAAAG	1937	False	NA	NA	False	AATAAA	-8	NA	94361427	94362478	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_94361400_94362500
ES.9755.1	chr13	+	2133	1	Intergenic	novelGene_8145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5585	False	NA	NA	False	NA	NA	NA	94413425	94415558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94413400_94415600
ES.9756.1	chr13	-	2062	1	Intergenic	novelGene_8143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTGAGGAAGCCTTAG	NA	False	NA	NA	False	NA	NA	NA	94301390	94299328	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94299300_94301400
ES.9757.1	chr13	-	4180	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	453	-374	453	374	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATTTTCCATTTTTTTC	NA	False	NA	NA	False	AATACA	-21	NA	94421884	94337443	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.10	chr13	-	3550	10	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	521	-127	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.2335543660691	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGTTTGTTTGTATAAT	NA	False	NA	-5	True	AATAAA	-12	NA	94421816	94337944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94339880_94339940_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.11	chr13	-	2076	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	354	1829	354	235	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTGATATATTCTTC	NA	False	NA	NA	False	AGTAAA	-14	NA	94421983	94339646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.12	chr13	-	1411	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	411	2437	411	0	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTCCTCAGATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	94421926	94340254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.13	chr13	-	1231	9	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	476	-118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	35.2491134640291	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGAGAAACTTCCT	NA	False	NA	NA	False	AATACA	-40	NA	94421861	94340372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368576_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.14	chr13	-	1372	8	ISM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	414	6445	414	-4008	5prime_fragment	FALSE	canonical	3	91	junction_4	9.44803186502083	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTGAAAAACTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94421923	94344262	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.15	chr13	-	2551	1	Intergenic	novelGene_8144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	5193	False	NA	NA	False	NA	NA	NA	94353718	94351167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94351200_94353700
ES.9757.16	chr13	-	2332	2	ISM	ENSMUSG00000021687.15	ENSMUST00000138255.2	621	6	33864	-731	15276	731	3prime_fragment	FALSE	canonical	3	104	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94367790	94360799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_94361563_94366221
ES.9757.2	chr13	-	3811	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	436	12	436	-12	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATCACATGCTAAATATA	NA	False	NA	NA	False	ATTAAA	-18	NA	94421901	94337829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.3	chr13	-	3878	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	258	123	258	-123	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTTGTATAATTTTA	NA	False	NA	-1	True	AATAAA	-16	NA	94422079	94337940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.4	chr13	-	3380	10	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	412	-124	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.2335543660691	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTTTGTATAATTTT	NA	False	NA	-2	True	AATAAA	-15	NA	94421925	94337941	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94338531_94338873_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.6	chr13	-	3563	8	NIC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	472	-125	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	36.0753180364161	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTTTGTATAATTT	NA	False	NA	-3	True	AATAAA	-14	NA	94421865	94337942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94389500_94389579_94421727
ES.9757.7	chr13	-	3414	10	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	482	-125	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33.2335543660691	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTTTGTATAATTT	NA	False	NA	-3	True	AATAAA	-14	NA	94421855	94337942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94338255_94338492_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.8	chr13	-	3770	10	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	457	-125	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	43.0764465446441	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTGTTTGTATAATTT	NA	False	NA	-3	True	AATAAA	-14	NA	94421880	94337942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94340672_94344643_94344762_94346474_94346568_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ES.9757.9	chr13	-	3631	9	NNC	ENSMUSG00000021687.15	novel	4259	9	NA	NA	492	-126	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	34.8308412186671	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTGTTTGTATAATT	NA	False	NA	-4	True	AATAAA	-13	NA	94421845	94337943	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369679_94389500_94389579_94421727
ES.9758.1	chr13	-	356	2	Intergenic	novelGene_8146	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAATCTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	94440155	94439199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94439453_94440052
ES.9759.1	chr13	+	187	1	Intergenic	novelGene_8147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGGTAAATTTC	NA	False	NA	NA	False	NA	NA	NA	94440457	94440644	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94440500_94440600
ES.976.1	chr1	+	838	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCTCCCCAACTTGCT	NA	False	NA	NA	False	NA	NA	NA	88542679	88543517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88542700_88543500
ES.9760.1	chr13	+	4061	24	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-365	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	89.3955125045695	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495102	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.10	chr13	+	3853	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_20	88.6492385754102	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495451	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.11	chr13	+	3623	24	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-16	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	90.723139775568	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495451	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.12	chr13	+	3857	26	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-15	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	86.9578840588937	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495452	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.13	chr13	+	4041	27	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-14	-1	combination_of_known_junctions	FALSE	canonical	2	6	junction_25	85.1454377059052	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495453	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679392_94684262_94684402_94702112
ES.9760.14	chr13	+	5213	23	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-11	35705	-11	-13709	5prime_fragment	FALSE	canonical	3	310	junction_8	43.404426212957	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCTAGTCACCAATCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	94495456	94667120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672
ES.9760.15	chr13	+	4078	28	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-5	-103	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.679793327996	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCCATTCTTTGATTT	NA	False	NA	17	True	AATAAA	-22	NA	94495462	94702718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94497213_94497373_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.16	chr13	+	3924	26	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	87.5931504171416	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495463	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94664662_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.18	chr13	+	3939	26	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-4	-1	combination_of_known_splicesites	FALSE	canonical	1	2	junction_23	87.3092343340611	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495463	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94679286_94679385_94684262_94684402_94702112
ES.9760.2	chr13	+	4310	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-276	-13	-276	13	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTACTGGCTGAACTTTC	NA	False	NA	22	True	AATAAA	-32	NA	94495191	94702838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.20	chr13	+	3904	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	86.6066825113473	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495464	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495614_94527291_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.21	chr13	+	3523	23	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-2	-97	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	91.5821448547606	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTTTGATTTTCCTGG	NA	False	NA	23	True	AATAAA	-28	NA	94495465	94702724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.22	chr13	+	3701	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-2	0	combination_of_known_splicesites	TRUE	canonical	3	7	junction_15	87.5608419424269	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495465	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.23	chr13	+	4178	28	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.679793327996	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495465	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94497213_94497373_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.24	chr13	+	4013	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	84.3388225092604	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495465	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540610_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.26	chr13	+	3525	22	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.5930787990916	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCCTCTCCTAATCCT	NA	False	NA	6	True	AATAAA	-16	NA	94495465	94702822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495749_94554497_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.29	chr13	+	3808	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	13	-4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_22	113.300416482024	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495480	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94664672_94664905_94679286_94679385_94684262_94684402_94702112
ES.9760.3	chr13	+	3776	9	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-131	119843	-131	-97847	intron_retention	FALSE	canonical	3	310	junction_8	45.6720647661128	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTCTCTTCCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	94495336	94582982	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426
ES.9760.30	chr13	+	4000	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_13	86.1411821049483	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495481	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591909_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.31	chr13	+	3610	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	14	-99	combination_of_known_splicesites	FALSE	canonical	2	6	junction_16	88.0096960409603	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTCTTTGATTTTCCT	NA	False	NA	21	True	AATAAA	-26	NA	94495481	94702722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.33	chr13	+	3892	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	18	-99	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_26	83.2863190851028	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTCTTTGATTTTCCT	NA	False	NA	21	True	AATAAA	-26	NA	94495485	94702722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684394_94702112
ES.9760.34	chr13	+	3865	26	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	113.152329185042	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495485	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613634_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.35	chr13	+	3884	26	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	22	-4	combination_of_known_splicesites	FALSE	canonical	2	5	junction_21	86.7617427210865	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495489	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.37	chr13	+	3494	24	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	24	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	92.0815575048238	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495491	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495604_94540566_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.38	chr13	+	3979	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	86.3637552729852	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATTTGCCTCTCCTAA	NA	False	NA	2	True	AATAAA	-12	NA	94495493	94702818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613628_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.39	chr13	+	3577	25	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	27	23006	27	-1010	5prime_fragment	FALSE	canonical	3	310	junction_8	42.5734455252202	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCTCTATTCTCTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	94495494	94679819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286
ES.9760.4	chr13	+	3714	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-33	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	88.9020606560325	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495434	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.40	chr13	+	3916	26	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	27	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	88.1553174800023	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495494	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.41	chr13	+	3914	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	27	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6066825113473	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTCTGAAAATCCCATT	NA	False	NA	8	True	AATAAA	-13	NA	94495494	94702709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527263_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.42	chr13	+	2130	18	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	27	89310	27	-67314	5prime_fragment	FALSE	canonical	3	310	junction_8	46.6015281095516	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATGAAGAAATTTTACTC	NA	False	NA	NA	False	AAGAAA	-7	NA	94495494	94613515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473
ES.9760.43	chr13	+	3700	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_16	88.0096960409603	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTCCTAATCCTTAC	NA	False	NA	9	True	AATAAA	-19	NA	94495494	94702825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.45	chr13	+	3981	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	86.3637552729852	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495497	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613628_94616227_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.46	chr13	+	3167	25	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	30	-11277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	86.0381758775332	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCTAGTAATTGTTTAT	NA	False	NA	NA	False	TATAAA	-21	NA	94495497	94669552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94669426
ES.9760.47	chr13	+	3809	26	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	34	-99	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	87.7336514685215	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATTCTTTGATTTTCCT	NA	False	NA	21	True	AATAAA	-26	NA	94495501	94702722	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.48	chr13	+	3795	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	35	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	114.388925988877	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495502	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.49	chr13	+	3793	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	35	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_26	83.7864642865012	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAAAAT	NA	False	NA	-13	True	NA	NA	NA	94495502	94702688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684346_94702112
ES.9760.5	chr13	+	3348	26	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-27	-1012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	84.7471533445224	520	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATACCTCTATTCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	94495440	94679817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94679665
ES.9760.51	chr13	+	3549	23	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	35	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_22	113.813434768854	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94495502	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94664672_94664905_94702112
ES.9760.52	chr13	+	3863	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	37	-133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	86.3637552729852	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAAAAT	NA	False	NA	-13	True	NA	NA	NA	94495504	94702688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616218_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.54	chr13	+	3562	24	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	38	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	90.5820915628981	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495505	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.55	chr13	+	4492	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	47	-518	47	518	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTCTAATGCCTTTG	NA	False	NA	NA	False	ATTAAA	-21	NA	94495514	94703343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.56	chr13	+	4009	28	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	49	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_25	109.170321617576	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495516	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94680491_94680531_94684262_94684402_94702112
ES.9760.57	chr13	+	2223	15	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	53	103266	53	-81270	5prime_fragment	FALSE	canonical	3	310	junction_8	46.1946303973852	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGCTGTCCCCATGAC	NA	False	NA	NA	False	AATATA	-18	NA	94495520	94599559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903
ES.9760.58	chr13	+	3090	21	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	55	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	140.027140226458	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94495522	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94679286_94679392_94702112
ES.9760.59	chr13	+	3677	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	55	-105	combination_of_known_splicesites	FALSE	canonical	3	4	junction_20	88.6492385754102	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATCCCATTCTTTGAT	NA	False	NA	15	True	AATAAA	-20	NA	94495522	94702716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.60	chr13	+	4346	26	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	67	80	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	84.7471533445224	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATATGAAGTATTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	94495534	94680909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94679665
ES.9760.61	chr13	+	3867	25	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	87.8507256657565	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495534	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580569_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.62	chr13	+	4052	27	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_25	86.1237584824764	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGCCTCTCCTAATCC	NA	False	NA	5	True	AATAAA	-15	NA	94495534	94702821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679487_94684262_94684402_94702112
ES.9760.64	chr13	+	3364	23	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	74	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	138.761500900759	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTTTGATTTTCCTGG	NA	False	NA	23	True	AATAAA	-28	NA	94495541	94702724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94613473_94613637_94616218_94616383_94619720_94619869_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.69	chr13	+	3927	28	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	249	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.679793327996	530	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94495716	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94495740_94513642_94513799_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.7	chr13	+	3940	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	-17	98	-17	-94	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGATTTTCCTGGTAT	NA	False	NA	26	True	AATAAA	-31	NA	94495450	94702727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.70	chr13	+	3826	27	NNC	ENSMUSG00000021686.7	novel	2008	12	NA	NA	459	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	86.6066825113473	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTCTTTGATTTTCCTGG	NA	False	NA	23	True	AATAAA	-28	NA	94495926	94702724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94496105_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.71	chr13	+	3178	1	Intergenic	novelGene_8148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAGAACCTTCCT	NA	False	NA	NA	False	NA	NA	NA	94497145	94500323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94497100_94500300
ES.9760.72	chr13	+	5654	2	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-32168	-97884	intron_retention	FALSE	canonical	3	373	junction_1	0	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAACCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94577202	94582945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94582485_94582573
ES.9760.73	chr13	+	2400	14	NNC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-17404	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	113.09727707969	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	False	NA	1	True	AATAAA	-11	NA	94591966	94702817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94592014_94598903_94599059_94608201_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.74	chr13	+	4506	1	Intergenic	novelGene_8152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGAGGCGCAAACATCT	NA	False	NA	NA	False	NA	NA	NA	94601504	94606010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94601500_94606000
ES.9760.75	chr13	+	7497	8	NNC	ENSMUSG00000021686.7	novel	413	5	NA	NA	14656	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.315991461472	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94624026	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94628486_94628583_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.76	chr13	+	5428	8	NNC	ENSMUSG00000021686.7	novel	413	5	NA	NA	16727	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.315991461472	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94626097	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94628486_94628581_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.77	chr13	+	3355	7	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	132810	-9	18907	9	3prime_fragment	FALSE	canonical	3	390	junction_1	28.1271912726616	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATCCTTACTGGCTGAAC	NA	False	NA	18	True	AATAAA	-28	NA	94628277	94702834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.78	chr13	+	7770	1	FSM	ENSMUSG00002075336.1	ENSMUST00020181768.1	114	1	-968	-6688	-968	6688	mono-exon	FALSE	NA	NA	NA	NA	NA	493	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTTCTAGCACTATT	NA	False	NA	NA	False	TTTAAA	-4	NA	94652701	94660471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94652700_94660500
ES.9760.79	chr13	+	5692	1	Intergenic	novelGene_8154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTAATTAGTAGGAGTT	NA	False	NA	NA	False	ATTAAA	-38	NA	94670435	94676127	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94670400_94676100
ES.9760.8	chr13	+	3562	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	-17	-133	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	88.9020606560325	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAAAAT	NA	False	NA	-13	True	NA	NA	NA	94495450	94702688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ES.9760.80	chr13	+	2078	3	NNC	ENSMUSG00000021686.7	novel	2008	12	NA	NA	580	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	239.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94679390	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_94680531_94684174_94684402_94702112
ES.9760.81	chr13	+	4665	2	ISM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	184981	1	1638	-1	3prime_fragment	FALSE	canonical	3	479	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94680448	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94684402_94702112
ES.9760.82	chr13	+	747	2	ISM	ENSMUSG00000021686.7	ENSMUST00000231916.2	2008	12	74890	103	5450	-103	3prime_fragment	FALSE	canonical	3	479	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCCATTCTTTGATTT	NA	False	NA	17	True	AATAAA	-22	NA	94684260	94702718	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94684402_94702112
ES.9760.83	chr13	+	5982	1	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	18032	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCTCCTAATCCTTA	NA	False	NA	8	True	AATAAA	-18	NA	94696842	94702824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_94696800_94702800
ES.9760.84	chr13	+	750	2	ISM	ENSMUSG00000021686.7	ENSMUST00000221206.2	413	5	33156	-632	22859	2	3prime_fragment	FALSE	canonical	1	7	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTCTCCTAATCCTT	NA	False	NA	7	True	AATAAA	-17	NA	94701669	94702823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_94701709_94702112
ES.9761.1	chr13	-	1943	1	FSM	ENSMUSG00000042857.4	ENSMUST00000221110.2	2177	1	163	71	58	-71	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTCTTCCTCCTTCCT	NA	False	NA	NA	False	AAGAAA	-14	NA	94495268	94493325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_94493300_94495300
ES.9762.1	chr13	-	2089	1	Intergenic	novelGene_8149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAACTGGCTGTTGA	NA	False	NA	NA	False	NA	NA	NA	94501469	94499380	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94499400_94501500
ES.9763.1	chr13	-	2604	1	Intergenic	novelGene_8150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94530647	94528043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94528000_94530600
ES.9764.1	chr13	-	6680	1	Intergenic	novelGene_8151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTCTAAATACTG	NA	False	NA	NA	False	NA	NA	NA	94562521	94555841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94555800_94562500
ES.9764.2	chr13	-	1295	2	Antisense	novelGene_ENSMUSG00000021686.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTCTAAATACTG	NA	False	NA	NA	False	NA	NA	NA	94562521	94555841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_94556049_94561433
ES.9764.3	chr13	-	6607	2	Antisense	novelGene_ENSMUSG00000021686.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGATGTTCTAAATACTG	NA	False	NA	NA	False	NA	NA	NA	94562521	94555841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_94561368_94561440
ES.9765.1	chr13	-	9460	2	Antisense	novelGene_ENSMUSG00000021686.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGAAAGCATGCAAGTGA	NA	False	NA	NA	False	CATAAA	-16	NA	94611205	94592642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_94599079_94608181
ES.9766.1	chr13	-	3522	1	Intergenic	novelGene_8153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACCTGTATCACAACAA	NA	False	NA	NA	False	NA	NA	NA	94637951	94634429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94634400_94638000
ES.9767.1	chr13	-	6108	1	Intergenic	novelGene_8155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATAAGTTCTGTGACTC	NA	False	NA	NA	False	NA	NA	NA	94694287	94688179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94688200_94694300
ES.9768.1	chr13	-	170	1	Intergenic	novelGene_8156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTTTGGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	94754368	94754198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94754200_94754400
ES.9769.1	chr13	-	175	1	Intergenic	novelGene_8157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAGGTTATGAGAC	NA	False	NA	NA	False	NA	NA	NA	94758126	94757951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94758000_94758100
ES.977.1	chr1	-	171	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	88603326	88603155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88603200_88603300
ES.9770.1	chr13	+	579	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	-20	0	-20	0	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	False	NA	37	True	AATAAA	-37	NA	94925397	94979430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ES.9770.2	chr13	+	413	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	11	135	11	-111	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTCAGCCACTGCTG	NA	False	NA	-37	True	ATTAAA	-24	NA	94925428	94979295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ES.9770.4	chr13	+	3763	1	Intergenic	novelGene_8161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAGTGCAAAACTT	NA	False	NA	NA	False	NA	NA	NA	94969640	94973403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_94969600_94973400
ES.9771.1	chr13	-	6044	1	Intergenic	novelGene_8158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCTGGGGTTTGGAAC	NA	False	NA	NA	False	NA	NA	NA	94938292	94932248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94932200_94938300
ES.9772.1	chr13	-	311	1	Intergenic	novelGene_8159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTATATAAATACAAGAC	NA	False	NA	NA	False	NA	NA	NA	94951175	94950864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94950900_94951200
ES.9772.2	chr13	-	200	1	Intergenic	novelGene_8160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAACAACAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	94951174	94950974	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_94951000_94951200
ES.9773.1	chr13	-	3230	1	Intergenic	novelGene_8162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAGGAAAAAAAATC	NA	False	NA	NA	False	AATGAA	-28	NA	95004226	95000996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_95001000_95004200
ES.9774.10	chr13	+	3005	13	NNC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.5814971065637	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGGGTTTGTTTTTT	NA	False	NA	15	True	AATATA	-16	NA	95112887	95159821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146819_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.11	chr13	+	6217	13	Fusion	ENSMUSG00000042015.18_ENSMUSG00000113070.2	novel	3062	14	NA	NA	32	1598	multi-exon	FALSE	non_canonical	0	0	junction_4	18.8981186600383	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAGAGGACACACATC	NA	False	NA	NA	False	NA	NA	NA	95112887	95163006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.12	chr13	+	3000	13	NNC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.6817240078565	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGGGTTTGTTTTTT	NA	False	NA	15	True	AATATA	-16	NA	95112913	95159821	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151544_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.13	chr13	+	509	1	ISM	ENSMUSG00000042015.18	ENSMUST00000160801.8	3062	14	45387	1070	4151	-1070	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTTGGTACCAACTA	NA	False	NA	NA	False	NA	NA	NA	95158242	95158751	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_95158200_95158800
ES.9774.2	chr13	+	1839	13	NNC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	1	-1228	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	18.8981186600383	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTTACAAGTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	95112852	95158593	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.3	chr13	+	3068	13	NNC	ENSMUSG00000042015.18	novel	3063	13	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	18.8981186600383	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGTTTGTTTTTTT	NA	False	NA	16	True	AATATA	-17	NA	95112852	95159822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.6	chr13	+	4240	13	Fusion	ENSMUSG00000042015.18_ENSMUSG00000113070.2	novel	3062	14	NA	NA	28	-383	multi-exon	FALSE	non_canonical	0	0	junction_4	18.8981186600383	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGTAAGAATTTAGTTA	NA	False	NA	NA	False	AATAAA	-24	NA	95112883	95161025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.8	chr13	+	2908	12	NNC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	32	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	25.5229600086531	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGTGGGTTTGTTTT	NA	False	NA	13	True	AATATA	-14	NA	95112887	95159819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_95113098_95114977_95115094_95133636_95133694_95136369_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ES.9774.9	chr13	+	4146	2	ISM	ENSMUSG00000042015.18	ENSMUST00000222995.2	1112	11	32	30395	32	-27993	5prime_fragment	FALSE	canonical	3	70	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCTAGCCCAAGATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	95112887	95118913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_95113098_95114977
ES.9775.1	chr13	-	2411	4	ISM	ENSMUSG00000021684.18	ENSMUST00000162882.2	2060	9	12897	-873	1084	2	3prime_fragment	TRUE	canonical	1	2	junction_3	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGGGTTTTAGTGTC	NA	False	NA	NA	False	NA	NA	NA	95169677	95160964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95162738_95164125_95164256_95166820_95166989_95169337
ES.9775.2	chr13	-	2575	19	NIC	ENSMUSG00000021684.18	novel	4235	19	NA	NA	-29	165	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTCAGTGACAAAACG	9181	False	NA	NA	False	AATAAA	-15	NA	95359350	95162445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95162738_95164125_95164256_95166820_95166989_95169337_95169459_95170676_95170895_95178372_95178572_95179407_95179544_95179934_95179981_95182829_95182995_95184244_95184322_95186433_95186512_95189395_95189439_95226785_95226865_95232143_95232233_95237396_95237455_95241160_95241221_95244162_95244354_95259771_95259829_95358982
ES.9776.1	chr13	+	2323	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	-425	-4	-425	4	multi-exon	FALSE	canonical	3	65	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGCTTGCATGTATG	NA	False	NA	42	True	NA	NA	NA	95461319	95474353	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_95461853_95472563
ES.9777.1	chr13	+	3149	2	Intergenic	novelGene_8163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGACTTTGTACACACA	NA	False	NA	NA	False	NA	NA	NA	95483536	95486726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95484373_95484413
ES.9777.2	chr13	+	160	1	Intergenic	novelGene_8164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGAAACACACA	NA	False	NA	NA	False	NA	NA	NA	95485596	95485756	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95485600_95485800
ES.9778.1	chr13	-	4311	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	5	-1067	5	1067	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGGCTTTCGAGGTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	95511855	95486123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.10	chr13	-	4604	13	NIC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-10	-2	intron_retention	FALSE	canonical	3	209	junction_4	21.0454204572449	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGTCTTCTTTGTATTT	NA	False	NA	25	True	AATAAA	-12	NA	95511870	95487192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.11	chr13	-	8233	12	NIC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-1	-3	intron_retention	FALSE	canonical	3	209	junction_4	21.6210793990533	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGTCTTCTTTGTATT	NA	False	NA	24	True	AATAAA	-11	NA	95511843	95487193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.12	chr13	-	3236	14	NNC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-9	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	94.7091467874519	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATATTGGTCTTCTTTG	NA	False	NA	20	True	AATAAA	-43	NA	95511851	95487197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492997_95493704_95493871_95495217_95495310_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.13	chr13	-	4177	3	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	18339	7	18321	-7	intron_retention	FALSE	canonical	3	263	junction_2	5.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATATTGGTCTTCTTTG	NA	False	NA	20	True	AATAAA	-43	NA	95493521	95487197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95488211_95489254_95489355_95490457
ES.9778.15	chr13	-	3233	14	NNC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-2	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.7515027962586	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATATTGGTCTTCTTTG	NA	False	NA	20	True	AATAAA	-43	NA	95511862	95487197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95488211_95489254_95489344_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.16	chr13	-	4086	13	NIC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-16	-7	intron_retention	FALSE	canonical	3	209	junction_4	23.2526880166573	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATATTGGTCTTCTTTG	NA	False	NA	20	True	AATAAA	-43	NA	95511876	95487197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.18	chr13	-	3767	13	NIC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	8	-55	intron_retention	FALSE	canonical	3	209	junction_4	23.4027242004003	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAACATTTTTA	NA	False	NA	-28	True	NA	NA	NA	95511852	95487245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95508152_95511353
ES.9778.2	chr13	-	3978	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	8	-737	8	737	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGTATGTATAACCAAT	NA	False	NA	NA	False	AATAAA	-19	NA	95511852	95486453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.20	chr13	-	2447	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	39	763	21	-763	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTAGAAGCTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	95511821	95487953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.3	chr13	-	3701	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	7	-459	7	459	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATATA	-16	NA	95511853	95486731	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.4	chr13	-	3285	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	-10	-26	-10	26	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATTGTCCCCTTTGAA	NA	False	NA	53	True	AATAAA	-40	NA	95511870	95487164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.5	chr13	-	3125	14	NNC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	70.7515027962586	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	False	NA	27	True	AATAAA	-14	NA	95511843	95487190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95488211_95489254_95489344_95490553_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.6	chr13	-	3419	15	NNC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	91.1965806734584	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	False	NA	27	True	AATAAA	-14	NA	95511863	95487190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95503050_95503218_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9778.8	chr13	-	3234	14	NNC	ENSMUSG00000021681.9	novel	3249	14	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	71.1817408939005	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTCTTTGTATTTG	NA	False	NA	26	True	AATAAA	-13	NA	95511856	95487191	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495310_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ES.9779.1	chr13	+	175	1	Intergenic	novelGene_8165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAACCTGAAAAAAAT	7604	False	NA	NA	False	NA	NA	NA	95539522	95539697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95539500_95539700
ES.978.1	chr1	-	3959	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	38	0	38	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGAGGCGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	88629905	88625946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88625900_88629900
ES.978.2	chr1	-	2289	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	-273	1981	-273	-1981	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACCATTGGAGGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	88630216	88627927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_88627900_88630200
ES.9780.1	chr13	+	3042	1	Intergenic	novelGene_8166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAAGCCTCTGCAGGA	NA	False	NA	NA	False	NA	NA	NA	95619055	95622097	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95619100_95622100
ES.9781.1	chr13	-	2815	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	-60	-14	-60	14	multi-exon	FALSE	canonical	3	40	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTTTCAGGCTGTGT	9766	False	NA	NA	False	AATAAA	-30	NA	95661795	95648225	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95650790_95661544
ES.9781.2	chr13	-	2195	4	NNC	ENSMUSG00000021678.10	novel	2741	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9830	False	NA	NA	False	AATAAA	-16	NA	95661731	95648239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95648560_95649244_95650790_95652176_95652320_95661544
ES.9782.1	chr13	+	209	1	Intergenic	novelGene_8167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATTTTGTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	95665199	95665408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95665200_95665400
ES.9783.1	chr13	-	2162	1	Intergenic	novelGene_8168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCAGCACAAATACACAC	5015	False	NA	NA	False	NA	NA	NA	95680830	95678668	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_95678700_95680800
ES.9784.1	chr13	+	206	1	Intergenic	novelGene_8169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATTGCTTTAGT	9354	False	NA	NA	False	NA	NA	NA	95706309	95706515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95706300_95706500
ES.9785.1	chr13	-	3405	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	-46	-23	-46	23	multi-exon	FALSE	canonical	3	48	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATTGTTCCTGTGGGCCC	NA	False	NA	NA	False	AATAAA	-26	NA	95755041	95738287	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95741446_95754794
ES.9785.2	chr13	-	3133	3	NNC	ENSMUSG00000048376.7	novel	3336	2	NA	NA	25	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	24	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTGTCTGGAATAGAT	NA	False	NA	NA	False	AATAAA	-11	NA	95754970	95738302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95740165_95740350_95741446_95754794
ES.9786.1	chr13	+	2187	1	Intergenic	novelGene_8170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCATTCCAGGTTACCA	1487	False	NA	NA	False	ATTAAA	-10	NA	95846733	95848920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_95846700_95848900
ES.9787.1	chr13	-	5909	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-61	-1	-61	1	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGAGTTTTTTTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	96028564	95763680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.11	chr13	-	5786	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	78	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_31	14.451495226644	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGTGGTAGAGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	96028425	95763685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870481_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.13	chr13	-	5741	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	216	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_35	14.3772496021474	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAATGTGGTAGAGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	96028775	95763686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028544
ES.9787.15	chr13	-	5114	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	1	732	1	-732	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCTGAATTTTTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	96028502	95764413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.16	chr13	-	2219	1	NIC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	11013	10708	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGCCCAAATAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	95786593	95784374	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95784400_95786600
ES.9787.17	chr13	-	4554	29	NNC	ENSMUSG00000021676.11	novel	1499	10	NA	NA	-17	3407	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.5975312885412	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCTTCTGCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	96028520	95791675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95792267_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.18	chr13	-	5190	28	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-16	29401	-16	2000	5prime_fragment	FALSE	canonical	3	39	junction_18	8.56925310429282	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTACTCAGCACTAAAGG	NA	False	NA	NA	False	AATAAA	-16	NA	96028519	95793082	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.19	chr13	-	4671	28	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	-3	29907	-3	1494	5prime_fragment	FALSE	canonical	3	39	junction_18	8.56925310429282	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGGAATTTATTTATT	NA	False	NA	NA	False	NA	NA	NA	96028506	95793588	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.2	chr13	-	5814	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.7245199908628	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028491	95763684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95764629_95765472_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.20	chr13	-	2899	18	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	51	47654	51	465	5prime_fragment	FALSE	canonical	3	39	junction_8	9.19078822709424	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	96028452	95811335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9787.21	chr13	-	5507	2	ISM	ENSMUSG00000021676.11	ENSMUST00000238261.2	632	5	-301	86500	-63	-86362	5prime_fragment	FALSE	canonical	3	72	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGTGCTTCAAATGTACAA	NA	False	NA	NA	False	NA	NA	NA	96028566	95969319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_95974432_96028171
ES.9787.22	chr13	-	5286	3	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	85	-86389	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96028418	95969346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95971532_95971577_95974432_96028171
ES.9787.3	chr13	-	5598	36	NIC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	-41	-3	combination_of_known_junctions	TRUE	canonical	0	0	junction_35	14.3772496021474	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96029032	95763684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028946
ES.9787.4	chr13	-	5783	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	48	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_34	14.4481055886937	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGGTAGAGTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	96028455	95763684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974344_95974432_96028171
ES.9787.8	chr13	-	5704	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	115	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	16.8514276025771	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGTGGTAGAGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	96028388	95763685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_95764629_95765472_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810259_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ES.9788.1	chr13	-	138	1	Intergenic	novelGene_8171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	96030867	96030729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96030700_96030900
ES.9789.1	chr13	-	6359	1	ISM	ENSMUSG00000051111.17	ENSMUST00000161263.8	9101	13	171622	3	23895	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCTCTTCTAAATAACT	NA	False	NA	NA	False	AATAAA	-17	NA	96097463	96091104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_96091100_96097500
ES.9789.2	chr13	-	7788	10	NNC	ENSMUSG00000051111.17	novel	9101	13	NA	NA	477	-19	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.58198889747161	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCGTGTGACTGACAG	6448	False	NA	NA	False	AATAAA	-34	NA	96126257	96091120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96097247_96097316_96097972_96112495_96112656_96113107_96113312_96114548_96114683_96118345_96118511_96122437_96122527_96123223_96123335_96125598_96125689_96126203
ES.9789.3	chr13	-	7246	14	NNC	ENSMUSG00000051111.17	novel	9101	13	NA	NA	-317	-2098	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2.29998713657324	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCACTAAGATATTGA	NA	False	NA	NA	False	TTTAAA	-14	NA	96269402	96093199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96097247_96097320_96097972_96112495_96112656_96113107_96113312_96114548_96114683_96118345_96118511_96122437_96122527_96123223_96123335_96125598_96125689_96126203_96126338_96166990_96167143_96184914_96185096_96224727_96225409_96268955
ES.9789.4	chr13	-	184	1	Intergenic	novelGene_8172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	96184753	96184569	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96184600_96184800
ES.9789.5	chr13	-	1748	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	413	0	413	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCCAGAGCAATTAG	NA	False	NA	NA	False	NA	NA	NA	96217471	96215723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96215700_96217500
ES.9789.6	chr13	-	837	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	83	1241	83	-1241	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	96217801	96216964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96217000_96217800
ES.9789.7	chr13	-	443	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	204	1514	204	-1514	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGCTGTCTGCTCAGC	NA	False	NA	NA	False	TATAAA	-14	NA	96217680	96217237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96217200_96217700
ES.979.1	chr1	+	390	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	-24	1	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTCTTGGCTCCTTA	NA	False	NA	18	True	NA	NA	NA	88682587	88683459	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_88682774_88683255
ES.979.2	chr1	+	846	1	NIC	ENSMUSG00000097398.3	novel	479	3	NA	NA	0	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGTCTTGGCTCCT	NA	False	NA	16	True	NA	NA	NA	88682611	88683457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_88682600_88683500
ES.979.3	chr1	+	591	2	NIC	ENSMUSG00000097398.3	novel	479	3	NA	NA	12	-1	intron_retention	FALSE	canonical	3	14	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGTCTTGGCTCCT	NA	False	NA	16	True	NA	NA	NA	88682623	88683457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_88683013_88683255
ES.979.4	chr1	+	466	3	FSM	ENSMUSG00000097398.3	ENSMUST00000181016.3	479	3	12	1	12	-1	multi-exon	FALSE	canonical	3	8	junction_1	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGTCTTGGCTCCT	NA	False	NA	16	True	NA	NA	NA	88682623	88683457	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_88682681_88682805_88683013_88683255
ES.979.5	chr1	+	555	2	NNC	ENSMUSG00000097398.3	novel	479	3	NA	NA	27	-3	intron_retention	FALSE	canonical	2	6	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAACTTGGTCTTGGCTC	NA	False	NA	14	True	NA	NA	NA	88682638	88683455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88682994_88683255
ES.9790.1	chr13	-	4844	1	Intergenic	novelGene_8173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTCAAATTTATGGCC	NA	False	NA	NA	False	NA	NA	NA	96311121	96306277	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96306300_96311100
ES.9791.1	chr13	-	5785	2	Antisense	novelGene_ENSMUSG00002074858.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGGCTACTTTGCAG	NA	False	NA	NA	False	NA	NA	NA	96505012	96492430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_96494092_96500888
ES.9792.1	chr13	+	3039	13	NNC	ENSMUSG00000021671.10	novel	716	5	NA	NA	-12514	-1614	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.0776801055713	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTGATGTAAGTAGAAT	NA	False	NA	6	True	AATAAA	-18	NA	96512287	96552080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96512547_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.10	chr13	+	2994	14	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	31	-2348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	46.2757364823322	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAAACCTT	NA	False	NA	NA	False	TTTAAA	-24	NA	96524832	96551346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541814_96542715_96542835_96547097_96547275_96550986
ES.9792.11	chr13	+	4548	12	NIC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	31	25	intron_retention	FALSE	canonical	0	0	junction_4	39.7282088510468	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGTATGTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	96524832	96553719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.12	chr13	+	6721	13	NIC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	-31	25	intron_retention	FALSE	canonical	0	0	junction_10	47.7772609791171	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGTATGTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	96524836	96553719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96546598_96546819_96547097_96547275_96550986
ES.9792.13	chr13	+	5959	12	ISM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	37	2899	-29	-2348	intron_retention	FALSE	canonical	3	109	junction_9	12.3368694208635	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAAACCTT	NA	False	NA	NA	False	TTTAAA	-24	NA	96524838	96551346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097
ES.9792.14	chr13	+	2441	14	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	-15	-2318	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	46.2757364823322	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGCCTGCCAGTGAT	NA	False	NA	NA	False	ATTAAA	-28	NA	96524852	96551376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96541635_96541814_96547097_96547275_96550986
ES.9792.15	chr13	+	6137	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	59	-1013	-7	1013	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCCACCTTTTTCTTCG	NA	False	NA	NA	False	AATGAA	-15	NA	96524860	96555258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.16	chr13	+	5204	13	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	1	17	intron_retention	FALSE	non_canonical	0	0	junction_11	36.2134873585335	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCACTGATGTGTATG	NA	False	NA	NA	False	ATTAAA	-33	NA	96524868	96553711	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541814_96547097_96547275_96550986
ES.9792.17	chr13	+	1433	7	ISM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	10398	2899	5467	-2348	3prime_fragment	FALSE	canonical	3	109	junction_3	16.6399786324649	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAAACCTT	NA	False	NA	NA	False	TTTAAA	-24	NA	96535199	96551346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.18	chr13	+	3230	1	NIC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	-2191	-1615	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGATGTAAGTAGAA	5771	False	NA	5	True	AATAAA	-17	NA	96548849	96552079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96548800_96552100
ES.9792.2	chr13	+	2178	13	NNC	ENSMUSG00000021671.10	novel	716	5	NA	NA	-134	-2323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	38.0776801055713	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGTACAGCCTGCCA	NA	False	NA	NA	False	ATTAAA	-23	NA	96524667	96551371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96524775_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.3	chr13	+	4651	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	6	526	6	25	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTGTATGTCTGGTTT	NA	False	NA	NA	False	ATTAAA	-41	NA	96524807	96553719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.4	chr13	+	2996	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	28	2159	28	-1608	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAGTAGAATATTTGT	NA	False	NA	12	True	AATAAA	-24	NA	96524829	96552086	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.5	chr13	+	2902	13	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	29	-2323	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	36.2134873585335	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGTACAGCCTGCCA	NA	False	NA	NA	False	ATTAAA	-23	NA	96524830	96551371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541814_96547097_96547275_96550986
ES.9792.6	chr13	+	4739	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	415	29	136	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGATGAATTTCCAAAC	NA	False	NA	NA	False	TATAAA	-5	NA	96524830	96553830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.7	chr13	+	2285	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	29	2869	29	-2318	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGCCTGCCAGTGAT	NA	False	NA	NA	False	ATTAAA	-28	NA	96524830	96551376	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ES.9792.8	chr13	+	2366	14	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	31	-2322	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	45.40833799825	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATGTACAGCCTGCCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	96524832	96551372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96541726_96541814_96547097_96547275_96550986
ES.9792.9	chr13	+	2459	15	NNC	ENSMUSG00000021671.10	novel	5183	13	NA	NA	31	-2348	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	51.5845353348684	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAAACCTT	NA	False	NA	NA	False	TTTAAA	-24	NA	96524832	96551346	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96541726_96541814_96542715_96542835_96547097_96547275_96550986
ES.9793.1	chr13	-	3688	4	NNC	ENSMUSG00000047117.14	novel	1886	7	NA	NA	10991	1361	intron_retention	FALSE	canonical	0	0	junction_3	1.63299316185545	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGATGGGGAAGTCTCTT	NA	False	NA	NA	False	AATAAA	-34	NA	96561469	96551280	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96554409_96556172_96556305_96557227_96557427_96561240
ES.9794.1	chr13	-	177	1	Intergenic	novelGene_8174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGG	NA	False	NA	NA	False	NA	NA	NA	96598222	96598045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96598000_96598200
ES.9795.1	chr13	-	4305	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	-77	-3	17	3	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGACTGTCATATTTA	NA	False	NA	NA	False	AATAAA	-23	NA	96679070	96617194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.10	chr13	-	4139	14	NNC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-26	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7569065689494	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTACACTTATTGACTG	NA	False	NA	NA	False	AATAAA	-14	NA	96679019	96617203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96618763_96620070_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.12	chr13	-	3936	6	ISM	ENSMUSG00000021668.16	ENSMUST00000091387.4	2382	14	27064	-1473	-2305	-7	3prime_fragment	FALSE	canonical	3	35	junction_4	2.48193472919817	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTACACTTATTGACT	NA	False	NA	NA	False	AATAAA	-13	NA	96628604	96617204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444
ES.9795.13	chr13	-	4350	15	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-31	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	11.4695693209537	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTACACTTATTGACT	NA	False	NA	NA	False	AATAAA	-13	NA	96679024	96617204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678733
ES.9795.14	chr13	-	4084	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-34	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	11.508165354325	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTACACTTATTGAC	NA	False	NA	NA	False	AATAAA	-12	NA	96679027	96617205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.15	chr13	-	5283	15	NNC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	8	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	11.022240966263	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGATGCTACACTTATTGA	NA	False	NA	NA	False	AATAAA	-11	NA	96678985	96617206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96618763_96618965_96619000_96619998_96620914_96622240_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.17	chr13	-	2722	13	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-33	-381	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	14.6749503122384	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAATATTTTTTATAGT	NA	False	NA	NA	False	NA	NA	NA	96679026	96617578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.18	chr13	-	2540	13	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-4	-27	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.6749970259335	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGTGAAGGTAATTCAG	NA	False	NA	NA	False	AATAAA	-21	NA	96678997	96620051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96620914_96623352_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.19	chr13	-	3029	1	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-9489	8287	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTAAAAAGGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	96635788	96632759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96632800_96635800
ES.9795.2	chr13	-	3336	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-25	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	10.888352171828	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGACTGTCATATT	NA	False	NA	NA	False	AATAAA	-21	NA	96679018	96617196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.20	chr13	-	3502	1	Intergenic	novelGene_8175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAGAAG	6973	False	NA	NA	False	NA	NA	NA	96664644	96661142	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96661100_96664600
ES.9795.21	chr13	-	1432	1	Intergenic	novelGene_8176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96673234	96671802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96671800_96673200
ES.9795.22	chr13	-	1991	1	Genic_Genomic	ENSMUSG00000021668.16	novel	NA	NA	NA	NA	-20	-24527	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGTTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	96679107	96677116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_96677100_96679100
ES.9795.3	chr13	-	4298	15	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-15	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	11.022240966263	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGACTGTCATATT	NA	False	NA	NA	False	AATAAA	-21	NA	96679102	96617196	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96619998_96620914_96623352_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9795.4	chr13	-	7884	8	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-11746	0	intron_retention	FALSE	canonical	3	26	junction_5	5.0548017179869	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTATTGACTGTCATAT	NA	False	NA	NA	False	AATAAA	-20	NA	96638045	96617197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96630504_96631915_96632041_96633110_96633351_96638026
ES.9795.6	chr13	-	4873	1	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	4228	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTATTGACTGTCATA	NA	False	NA	NA	False	AATAAA	-19	NA	96622071	96617198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96617200_96622100
ES.9795.7	chr13	-	4012	14	NNC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	-32	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	14.7780422432871	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTATTGACTGTCATA	NA	False	NA	NA	False	AATAAA	-19	NA	96679025	96617198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644788_96653146_96653267_96678834
ES.9795.8	chr13	-	2974	11	NNC	ENSMUSG00000021668.16	novel	1644	13	NA	NA	10832	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	16.0265404875787	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTATTGACTGTCATA	4997	False	NA	NA	False	AATAAA	-19	NA	96644836	96617198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627305_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719
ES.9795.9	chr13	-	6617	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	8	-2	intron_retention	FALSE	canonical	3	26	junction_6	6.05595213100448	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACTTATTGACTGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	96678985	96617199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96618763_96618965_96619000_96619998_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ES.9796.1	chr13	+	3198	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	-62	2149	55	3	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGTTTGAATTTGAC	NA	False	NA	NA	False	AATATA	-23	NA	96679180	96774526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.10	chr13	+	1557	4	NNC	ENSMUSG00000021669.16	novel	3054	7	NA	NA	1	-38160	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	22.9927524813074	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCGAAAAACCAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96679254	96710087	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708571_96709330
ES.9796.11	chr13	+	3629	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	12	1644	1	508	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGGTGTGATAACTT	NA	False	NA	NA	False	AAAACA	-44	NA	96679254	96775031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.12	chr13	+	3921	16	NIC	ENSMUSG00000021669.16	novel	5285	17	NA	NA	1	887	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	16.2294656583498	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679254	96775410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.13	chr13	+	5207	18	NNC	ENSMUSG00000021669.16	novel	5285	17	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	15.5867923860496	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96679254	96776665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625_96775441_96775496
ES.9796.14	chr13	+	2429	17	NNC	ENSMUSG00000021669.16	novel	5285	17	NA	NA	2	-224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	16.0661474457942	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGCTATATTTTTATTT	NA	False	NA	7	True	TATAAA	-20	NA	96679255	96773834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770582_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.15	chr13	+	3856	16	NNC	ENSMUSG00000021669.16	novel	5285	17	NA	NA	2	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	16.3413585726524	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679255	96775410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771478_96773625
ES.9796.16	chr13	+	5155	15	ISM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	13	227	2	-227	intron_retention	FALSE	canonical	3	25	junction_11	12.1312970183299	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATGGCTATATTTTTA	NA	False	NA	4	True	TATAAA	-17	NA	96679255	96773831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580
ES.9796.17	chr13	+	5333	18	NNC	ENSMUSG00000021669.16	novel	2746	18	NA	NA	3	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	16.0077835738773	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96679256	96776665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.18	chr13	+	2289	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	18	2978	-2	-361	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGTAGGATCTACAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	96679260	96773697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.19	chr13	+	4284	13	ISM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	60383	-2607	-25937	-10	3prime_fragment	FALSE	canonical	3	25	junction_6	11.8661516742184	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96739625	96776665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.2	chr13	+	4159	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	-61	-1352	56	887	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679181	96775410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.3	chr13	+	2572	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	-54	228	-54	-228	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATATGGCTATATTTTT	NA	False	NA	3	True	TATAAA	-16	NA	96679188	96773830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.4	chr13	+	3747	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	-54	-947	-54	482	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATCGAAATGGAGTCTA	NA	False	NA	NA	False	AAAACA	-18	NA	96679188	96775005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.5	chr13	+	4028	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	-8	1265	-8	887	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679234	96775410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.6	chr13	+	3201	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	10	-465	-1	0	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGACTGTTTGAATTT	NA	False	NA	NA	False	AATATA	-20	NA	96679252	96774523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.7	chr13	+	5264	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	11	10	0	-10	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96679253	96776665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.8	chr13	+	2373	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	12	361	1	-361	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACGTAGGATCTACAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	96679254	96773697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ES.9796.9	chr13	+	4394	18	NNC	ENSMUSG00000021669.16	novel	5285	17	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	15.5867923860496	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	False	NA	NA	False	ATTAAA	-39	NA	96679254	96776665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625_96774650_96775518
ES.9797.1	chr13	-	320	1	Intergenic	novelGene_8177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTATGTAAATAAAAGTT	NA	False	NA	NA	False	AATAAA	-41	NA	96681329	96681009	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96681000_96681300
ES.9797.2	chr13	-	175	1	Intergenic	novelGene_8178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATAAACAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	96681329	96681154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96681200_96681300
ES.9798.1	chr13	-	179	1	Intergenic	novelGene_8179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGTCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	96697845	96697666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96697700_96697800
ES.9799.1	chr13	-	2349	1	Intergenic	novelGene_8180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96707777	96705428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96705400_96707800
ES.98.1	chr1	-	212	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGGTACTGGTACAGT	NA	False	NA	NA	False	NA	NA	NA	12176809	12176597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_12176600_12176800
ES.980.1	chr1	+	760	3	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATGCAGAAACCTGG	NA	False	NA	NA	False	AATAAA	-16	NA	88688879	88695195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88689254_88690716_88690876_88694968
ES.9800.1	chr13	+	173	1	Intergenic	novelGene_8181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCCTAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	96779002	96779175	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_96779000_96779200
ES.9801.1	chr13	+	5661	2	Antisense	novelGene_ENSMUSG00000021670.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGATAAAGCCAGGAGGTA	NA	False	NA	NA	False	NA	NA	NA	96787987	96794276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_96791432_96792059
ES.9801.2	chr13	+	2633	1	Antisense	novelGene_ENSMUSG00000021670.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96791621	96794254	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_96791600_96794300
ES.9802.1	chr13	+	2837	1	Intergenic	novelGene_8182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCAGTGACCCAAGAA	NA	False	NA	NA	False	AAGAAA	-10	NA	96821541	96824378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_96821500_96824400
ES.9802.2	chr13	+	331	1	Intergenic	novelGene_8183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACATAATAATTAA	NA	False	NA	NA	False	NA	NA	NA	96824180	96824511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_96824200_96824500
ES.9803.1	chr13	-	2846	1	Genic_Genomic	ENSMUSG00000021670.15	novel	NA	NA	NA	NA	3558	2567	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCTTGGTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96785753	96782907	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_96782900_96785800
ES.9803.10	chr13	-	4481	21	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-22975	5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_20	144.643734741606	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96830419	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96829874_96829963_96830330
ES.9803.11	chr13	-	5616	17	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-11	5	intron_retention	FALSE	canonical	3	390	junction_16	37.9108740996564	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807342	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.13	chr13	-	4508	19	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	3	5	intron_retention	FALSE	non_canonical	0	0	junction_11	113.534856234757	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807380	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796405_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.14	chr13	-	4233	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-19	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	111.320469427596	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807402	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.16	chr13	-	4731	20	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-7	2	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	109.037211874695	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTAAGCAGTGGCTTT	NA	False	NA	-3	True	AGTAAA	-24	NA	96807338	96785472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806908
ES.9803.18	chr13	-	4631	18	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-8	1	intron_retention	FALSE	canonical	3	390	junction_17	36.3936570008593	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTAAGCAGTGGCTT	NA	False	NA	-4	True	AGTAAA	-23	NA	96807391	96785473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792521_96793070_96793266_96795090_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.19	chr13	-	4577	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	3	1	intron_retention	FALSE	canonical	3	390	junction_18	35.8457342882897	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTAAGCAGTGGCTT	NA	False	NA	-4	True	AGTAAA	-23	NA	96807380	96785473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802733_96803028_96803217_96807318
ES.9803.2	chr13	-	4870	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	64	-509	3	509	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACATTAGTATGACTCT	NA	False	NA	NA	False	GATAAA	-17	NA	96807380	96784965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.21	chr13	-	4294	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-17	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	113.616313382659	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGTAAGCAGTGGCTT	NA	False	NA	-4	True	AGTAAA	-23	NA	96807400	96785473	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802620_96802733_96803028_96803217_96807318
ES.9803.22	chr13	-	4188	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	113.433683786096	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	False	NA	-5	True	AGTAAA	-22	NA	96807366	96785474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.23	chr13	-	4847	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-22978	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	109.467079760294	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	False	NA	-5	True	AGTAAA	-22	NA	96830422	96785474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96829874
ES.9803.24	chr13	-	4851	18	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-12	0	intron_retention	FALSE	canonical	3	390	junction_17	34.4398578137073	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	False	NA	-5	True	AGTAAA	-22	NA	96807368	96785474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.26	chr13	-	4288	21	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	108.34956160502	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTAAGCAGTGGC	NA	False	NA	-6	True	AGTAAA	-21	NA	96807365	96785475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96786186_96786242_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.27	chr13	-	4679	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.327214153288	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTAAGCAGTGGC	NA	False	NA	-6	True	AGTAAA	-21	NA	96807327	96785475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806946
ES.9803.28	chr13	-	4316	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-4	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	110.034947860634	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGTGTAAGCAGTGGC	NA	False	NA	-6	True	AGTAAA	-21	NA	96807387	96785475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789286_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.3	chr13	-	4511	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	-80	-6	-80	6	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCAGTGGCTTTTTTA	NA	False	NA	1	True	AGTAAA	-28	NA	96807524	96785468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.31	chr13	-	4462	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-19	-2	intron_retention	FALSE	canonical	3	390	junction_18	36.2587154273899	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAAGTGTAAGCAGTGG	NA	False	NA	-7	True	AGTAAA	-20	NA	96807402	96785476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.32	chr13	-	4328	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	110.699363279429	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAAGTGTAAGCAGTGG	NA	False	NA	-7	True	AGTAAA	-20	NA	96807373	96785476	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801293_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.34	chr13	-	4467	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	3	-6	intron_retention	FALSE	canonical	3	390	junction_18	36.0374034087425	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTGAAAAGTGTAAGCA	NA	False	NA	-11	True	AGTAAA	-16	NA	96807380	96785480	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.35	chr13	-	4429	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-611	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	110.112131213791	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATTGAAAAGTGTAAGC	NA	False	NA	-12	True	AGTAAA	-15	NA	96808055	96785481	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807918
ES.9803.37	chr13	-	4288	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-13	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	149.131298003878	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAACATTGAAAAGTGTAA	NA	False	NA	-14	True	AGTAAA	-13	NA	96807369	96785483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788600_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801299_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.4	chr13	-	4329	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.327214153288	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807351	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803209_96807318
ES.9803.40	chr13	-	4277	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	41	107	-20	-107	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGTCATCTTGCTAAAT	NA	False	NA	-112	True	AGTAAA	-33	NA	96807403	96785581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.41	chr13	-	4722	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-22975	-122	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	109.467079760294	723	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGTGACTGTAACCAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	96830419	96785596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96829874
ES.9803.42	chr13	-	4385	20	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-2	-339	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	109.037211874695	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACATTTGTGTAGAAGA	NA	False	NA	26	True	NA	NA	NA	96807333	96785813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806908
ES.9803.43	chr13	-	4192	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	-133	366	-133	-366	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGCTTCAAGTTTGGTC	NA	False	NA	-1	True	AATAAA	-24	NA	96807577	96785840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.44	chr13	-	4692	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-4	-367	intron_retention	FALSE	canonical	3	390	junction_18	36.1321733447807	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGCTTCAAGTTTGGT	NA	False	NA	-2	True	AATAAA	-23	NA	96807387	96785841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.46	chr13	-	4193	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-8	-367	intron_retention	FALSE	canonical	3	390	junction_18	35.8457342882897	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGCTTCAAGTTTGGT	NA	False	NA	-2	True	AATAAA	-23	NA	96807364	96785841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802733_96803028_96803217_96807318
ES.9803.48	chr13	-	5204	17	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-15	-368	intron_retention	FALSE	canonical	3	390	junction_16	35.4219542621522	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATGCTTCAAGTTTGG	NA	False	NA	-3	True	AATAAA	-22	NA	96807398	96785842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.5	chr13	-	4678	20	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	2	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_19	109.467079760294	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807329	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806955
ES.9803.50	chr13	-	3833	19	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-4	-368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	114.209305365626	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATGCTTCAAGTTTGG	NA	False	NA	-3	True	AATAAA	-22	NA	96807360	96785842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96796380_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.52	chr13	-	4094	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-13	-368	intron_retention	FALSE	canonical	3	390	junction_18	36.0374034087425	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATGCTTCAAGTTTGG	NA	False	NA	-3	True	AATAAA	-22	NA	96807369	96785842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.53	chr13	-	4106	21	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-7	-369	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_20	145.525736555429	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAATGCTTCAAGTTTG	NA	False	NA	-4	True	AATAAA	-21	NA	96807338	96785843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96805660_96805817_96807318
ES.9803.55	chr13	-	3970	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	0	-369	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	110.801037026258	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAATGCTTCAAGTTTG	NA	False	NA	-4	True	AATAAA	-21	NA	96807383	96785843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796708_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.57	chr13	-	3896	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-3	-369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	110.761879298869	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAATGCTTCAAGTTTG	NA	False	NA	-4	True	AATAAA	-21	NA	96807359	96785843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795192_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.58	chr13	-	3299	16	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	10	-369	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	122.144650130718	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAATGCTTCAAGTTTG	NA	False	NA	-4	True	AATAAA	-21	NA	96807373	96785843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96793162_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.59	chr13	-	4375	21	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-22975	-369	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_19	143.910206378839	722	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAATGCTTCAAGTTTG	NA	False	NA	-4	True	AATAAA	-21	NA	96830419	96785843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96829874_96830231_96830330
ES.9803.6	chr13	-	4463	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-2832	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	110.327214153288	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96810276	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96810117
ES.9803.61	chr13	-	3978	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-526	-373	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_19	110.112131213791	715	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATCTAATGCTTCAAG	NA	False	NA	-8	True	AATAAA	-17	NA	96807970	96785847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807918
ES.9803.62	chr13	-	4297	20	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	5	-373	combination_of_known_junctions	FALSE	canonical	2	4	junction_19	109.467079760294	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATCTAATGCTTCAAG	NA	False	NA	-8	True	AATAAA	-17	NA	96807326	96785847	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806955
ES.9803.63	chr13	-	3664	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	79	682	-9	627	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTAGCTTGGGCCAGAG	NA	False	NA	NA	False	AATAAA	-27	NA	96807365	96786156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.64	chr13	-	3314	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	61	1050	0	259	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACTGCATTTATCTCT	NA	False	NA	NA	False	AAGAAA	-2	NA	96807383	96786524	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.65	chr13	-	3274	19	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	11	149	intron_retention	FALSE	canonical	3	390	junction_18	36.2587154273899	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGGTCTATTGATTG	NA	False	NA	NA	False	NA	NA	NA	96807372	96786634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96787142_96787517_96787673_96788363_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.66	chr13	-	3207	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	50	1168	-11	141	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCATTTGGTGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	96807394	96786642	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.67	chr13	-	2835	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	64	1526	3	-50	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGGAAGATGAATGGACA	NA	False	NA	NA	False	ATTAAA	-18	NA	96807380	96787000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.68	chr13	-	3497	1	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	1969	-973	mono-exon	FALSE	NA	NA	NA	NA	NA	587	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	96801126	96797629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_96797600_96801100
ES.9803.69	chr13	-	3734	1	Intergenic	novelGene_8184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAATCTCTACTTGTA	NA	False	NA	NA	False	AATAAA	-6	NA	96830419	96826685	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96826700_96830400
ES.9803.8	chr13	-	4233	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	13	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	111.151564811796	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807370	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793143_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9803.9	chr13	-	4308	20	NNC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	-7	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	110.781709941749	716	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	False	NA	0	True	AGTAAA	-27	NA	96807338	96785469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791414_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ES.9804.1	chr13	+	174	1	Intergenic	novelGene_8185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTGGTGATGGAAT	NA	False	NA	NA	False	NA	NA	NA	96875817	96875991	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_96875800_96876000
ES.9805.10	chr13	+	4666	14	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	33	12734	intron_retention	FALSE	canonical	1	1	junction_11	3.77942107585792	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTATCTATATTTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	96884812	96970663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932808_96935118_96935400_96935895_96935973_96940615_96940772_96962605_96962751_96967062_96969369_96970103
ES.9805.11	chr13	+	3846	18	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	33	32564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_17	4.80196038399025	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGTAGTTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	96884812	96990493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_96989945
ES.9805.12	chr13	+	3591	15	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	33	12378	intron_retention	FALSE	canonical	1	1	junction_7	4.80645824036021	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCCTTGTTATCAACTG	NA	False	NA	NA	False	AATAAA	-23	NA	96884812	96970307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932808_96935235_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103
ES.9805.13	chr13	+	5845	26	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	39	-248	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	4.02988833592198	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTGCTTTTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	96884818	97046299	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932808_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.14	chr13	+	5285	25	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	40	-246	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	3.76017139089283	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGCTTTTATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96884819	97046301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.17	chr13	+	3957	18	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	51	33005	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	5.29084866394561	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATTCTATCATTGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	96884830	96990934	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935235_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_96990140
ES.9805.19	chr13	+	5374	24	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	52	-245	intron_retention	FALSE	canonical	2	5	junction_12	3.96630419888713	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGCTTTTATTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	96884831	97046302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045988
ES.9805.2	chr13	+	5986	25	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	-5	-244	intron_retention	FALSE	canonical	0	0	junction_17	4.65176191231762	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGCTTTTATTGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	96884774	97046303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932808_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002842_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.3	chr13	+	4482	24	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	0	-246	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	4.53593090634608	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGCTTTTATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96884779	97046301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96968662_96969369_96970103_96970275_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.5	chr13	+	5187	25	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	21	-246	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	4.11615212708828	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGCTTTTATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96884800	97046301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935235_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.6	chr13	+	5284	24	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	21	-246	intron_retention	FALSE	canonical	1	2	junction_6	4.19784803993089	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGCTTTTATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	96884800	97046301	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935235_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
ES.9805.7	chr13	+	6879	26	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	25	-245	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	4.73286382647969	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGCTTTTATTGTCA	NA	False	NA	NA	False	AATAAA	-17	NA	96884804	97046302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96934134_96934175_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96969212_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045988
ES.9805.9	chr13	+	4418	19	NNC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	29	-43043	intron_retention	FALSE	canonical	0	0	junction_7	5.41403069764678	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGCATTTTTAAGAATC	NA	False	NA	NA	False	GATAAA	-16	NA	96884808	97003504	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96932246_96932778_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97003179
ES.9806.1	chr13	-	4319	1	Antisense	novelGene_ENSMUSG00000109561.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGGAGGGGGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	96890957	96886638	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_96886600_96891000
ES.9807.1	chr13	-	203	1	Intergenic	novelGene_8186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96901435	96901232	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96901200_96901400
ES.9808.1	chr13	-	176	1	Intergenic	novelGene_8187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATAAAGCTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	96917847	96917671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_96917700_96917800
ES.9809.1	chr13	-	811	1	Intergenic	novelGene_8188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAATAAGT	NA	False	NA	NA	False	NA	NA	NA	97042680	97041869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97041900_97042700
ES.981.1	chr1	+	3026	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	88731054	88734080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88731100_88734100
ES.9810.1	chr13	+	2019	2	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	-1261	-25229	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAATAATATTGAGTC	NA	False	NA	NA	False	AATAAA	-16	NA	97059935	97062185	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97059978_97060208
ES.9810.2	chr13	+	4873	3	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	-113	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGACTTGTGAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	97061083	97087422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97061122_97072387_97072505_97082704
ES.9810.3	chr13	+	5109	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	-14	-8	-14	8	multi-exon	FALSE	canonical	3	6	junction_1	3	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGACTTGTGAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	97061182	97087422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97061457_97072387_97072505_97082704
ES.9810.4	chr13	+	5342	3	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	-10	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTCGGACTTGTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	97061186	97087420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97061696_97072387_97072505_97082704
ES.9810.5	chr13	+	5677	3	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	12	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTCGGACTTGTGAGC	NA	False	NA	NA	False	AATAAA	-18	NA	97061208	97087420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97062053_97072387_97072505_97082704
ES.9810.6	chr13	+	5797	5	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	23	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.19615242270663	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGACTTGTGAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	97061219	97087422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97062016_97068705_97068768_97072044_97072149_97072387_97072505_97082704
ES.9810.7	chr13	+	5488	3	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	32	-163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGTTTTCCTTGTCAC	NA	False	NA	NA	False	NA	NA	NA	97061228	97087251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97062053_97072387_97072505_97082704
ES.9810.8	chr13	+	5153	4	NNC	ENSMUSG00000091387.3	novel	5087	3	NA	NA	46	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.65685424949238	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGACTTGTGAGCTT	NA	False	NA	NA	False	AATAAA	-20	NA	97061242	97087422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97061457_97072044_97072149_97072387_97072505_97082704
ES.9810.9	chr13	+	3553	1	Intergenic	novelGene_8189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTGTCTTAGTTAGGG	NA	False	NA	NA	False	NA	NA	NA	97064083	97067636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97064100_97067600
ES.9811.1	chr13	-	178	1	Intergenic	novelGene_8190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTG	5385	False	NA	NA	False	NA	NA	NA	97132547	97132369	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97132400_97132500
ES.9812.1	chr13	+	209	1	Intergenic	novelGene_8191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTAGGGTGTGAACC	2014	False	NA	NA	False	AAGAAA	-9	NA	97140004	97140213	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97140000_97140200
ES.9813.1	chr13	+	191	1	Intergenic	novelGene_8192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTTAATCACAAA	NA	False	NA	23	True	NA	NA	NA	97150529	97150720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97150500_97150700
ES.9814.1	chr13	+	175	1	Intergenic	novelGene_8193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTCCTGC	NA	False	NA	NA	False	NA	NA	NA	97169731	97169906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97169700_97169900
ES.9815.1	chr13	+	187	1	Intergenic	novelGene_8194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATGTAGGCTTC	NA	False	NA	NA	False	NA	NA	NA	97189665	97189852	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97189700_97189900
ES.9816.1	chr13	+	4457	12	NIC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-34	8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	108.374313079886	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTCTGTGTGTTCACAT	4326	False	NA	22	True	AATAAA	-28	NA	97203759	97266031	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97203831_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.10	chr13	+	4590	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-370	6	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8347	False	NA	20	True	AATAAA	-26	NA	97207780	97266029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.11	chr13	+	4713	12	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-368	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.4498909377398	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCAGTCTTCTCTGTG	8349	False	NA	13	True	AATAAA	-19	NA	97207782	97266022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.12	chr13	+	4414	12	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-366	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	106.329054207188	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8351	False	NA	20	True	AATAAA	-26	NA	97207784	97266029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.13	chr13	+	5489	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-366	-589	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACAATTTAAAG	8351	False	NA	NA	False	NA	NA	NA	97207784	97266932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.14	chr13	+	4023	11	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-362	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	112.964596223773	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTCAGTCTTCTCTG	8355	False	NA	11	True	AATAAA	-17	NA	97207788	97266020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228412_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003_97263806_97264252
ES.9816.15	chr13	+	2136	12	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-354	6368	-354	-6368	5prime_fragment	FALSE	canonical	3	256	junction_9	16.9856526720116	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGAGTACTTGATGT	8363	False	NA	NA	False	AATAAA	-19	NA	97207796	97259655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
ES.9816.16	chr13	+	2517	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-354	2384	-354	-2384	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAACCTTCCACTGGA	8363	False	NA	16	True	AATAAA	-21	NA	97207796	97263639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.17	chr13	+	4624	14	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-354	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	115.570568108917	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8363	False	NA	14	True	AATAAA	-20	NA	97207796	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97221556_97221642_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.18	chr13	+	3565	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-348	1330	-348	-1330	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTGGCTATTTGATAT	8369	False	NA	NA	False	NA	NA	NA	97207802	97264693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.19	chr13	+	2170	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-345	-2389	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATTCTAAACCTTCCA	8372	False	NA	11	True	AATAAA	-16	NA	97207805	97263634	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.2	chr13	+	5477	13	FSM	ENSMUSG00000041817.15	ENSMUST00000169863.9	6013	13	-30	566	-30	-566	multi-exon	FALSE	canonical	2	3	junction_1	80.3818577513332	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGATTACAGATTAAT	4330	False	NA	NA	False	AATAAA	-14	NA	97203763	97266955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97203831_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.21	chr13	+	4775	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-322	6	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8395	False	NA	20	True	AATAAA	-26	NA	97207828	97266029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.22	chr13	+	4780	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-304	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	78.0208589921299	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8413	False	NA	14	True	AATAAA	-20	NA	97207846	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208003_97208073_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.23	chr13	+	1882	9	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-304	-2382	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.5740849541154	481	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACCTTCCACTGGAAC	8413	False	NA	18	True	AATAAA	-23	NA	97207846	97263641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228412_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.24	chr13	+	3164	12	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-303	-13799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.538189327929	430	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCAATATTCTCACAGGC	8414	False	NA	NA	False	AATAAA	-29	NA	97207847	97252224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97221556_97221642_97221956_97222107_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616
ES.9816.25	chr13	+	3295	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-235	1487	-235	-1487	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGCCTAGATTCTGAC	8482	False	NA	NA	False	AATAAA	-18	NA	97207915	97264536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.26	chr13	+	2780	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-229	1996	-229	-1996	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTTATGATCAGTGG	8488	False	NA	NA	False	ATTAAA	-28	NA	97207921	97264027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.27	chr13	+	4835	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	104.191505519813	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8492	False	NA	14	True	AATAAA	-20	NA	97207925	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97257935_97257999_97259199_97259401_97263003
ES.9816.28	chr13	+	5991	12	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-225	2384	-225	-2384	intron_retention	FALSE	canonical	3	256	junction_9	16.9856526720116	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAACCTTCCACTGGA	8492	False	NA	16	True	AATAAA	-21	NA	97207925	97263639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
ES.9816.29	chr13	+	5615	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-225	-718	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	104.191505519813	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTTGTGTTTTAAA	8492	False	NA	NA	False	ATTAAA	-20	NA	97207925	97266803	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97257935_97257999_97259199_97259401_97263003
ES.9816.3	chr13	+	5589	14	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-14	-589	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_11	121.787233228753	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAACAATTTAAAG	4346	False	NA	NA	False	NA	NA	NA	97203779	97266932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97203831_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97257847_97257999_97259199_97259401_97263003
ES.9816.30	chr13	+	2062	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-225	-6369	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	118.96136160769	446	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTGAGTACTTGATG	8492	False	NA	NA	False	AATAAA	-18	NA	97207925	97259654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97221556_97221642_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
ES.9816.31	chr13	+	5001	15	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-221	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	117.570321987502	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTCAGTCTTCTCTGT	8496	False	NA	12	True	AATAAA	-18	NA	97207929	97266021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97221556_97221642_97221956_97222107_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.32	chr13	+	5086	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-219	-320	-219	320	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATTTGCAATCTGGT	8498	False	NA	NA	False	NA	NA	NA	97207931	97266343	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.34	chr13	+	4726	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-210	-2	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	73.1510518645418	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTCAGTCTTCTCTGT	8507	False	NA	12	True	AATAAA	-18	NA	97207940	97266021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.35	chr13	+	3507	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-203	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	81.1940405585424	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8514	False	NA	20	True	AATAAA	-26	NA	97207947	97266029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97264252
ES.9816.36	chr13	+	5653	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-203	-566	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	73.1510518645418	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGATTACAGATTAAT	8514	False	NA	NA	False	AATAAA	-14	NA	97207947	97266955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.37	chr13	+	3415	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-112	-1330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.014003011038	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTGGCTATTTGATAT	8605	False	NA	NA	False	NA	NA	NA	97208038	97264693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97219333_97219420_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.38	chr13	+	4701	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-111	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81.1940405585424	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAATGTCAGTCTTCTC	8606	False	NA	9	True	AATAAA	-15	NA	97208039	97266018	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228277_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.39	chr13	+	4449	11	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-90	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	85.4590545232043	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTCAGTCTTCTCTGT	8627	False	NA	12	True	AATAAA	-18	NA	97208060	97266021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.4	chr13	+	4536	13	FSM	ENSMUSG00000041817.15	ENSMUST00000169863.9	6013	13	-14	1491	-14	7	multi-exon	FALSE	canonical	2	3	junction_1	80.3818577513332	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTGTGTTCACA	4346	False	NA	21	True	AATAAA	-27	NA	97203779	97266030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97203831_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.40	chr13	+	5305	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-75	-715	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGTTTTAAATTT	8642	False	NA	NA	False	ATTAAA	-23	NA	97208075	97266806	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.41	chr13	+	4178	9	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	117.183549933427	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAATGTCAGTCTTCT	8653	False	NA	8	True	AATAAA	-14	NA	97208086	97266017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97243490_97243642_97246530_97246660_97247803_97247911_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.42	chr13	+	5434	12	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	-573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	108.957721727131	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATATGGTGATTACA	8653	False	NA	NA	False	AATAAA	-7	NA	97208086	97266948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228327_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.43	chr13	+	8216	12	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-64	-2	-64	2	intron_retention	FALSE	canonical	3	256	junction_9	16.9856526720116	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTCTTCTCTGTGTGT	8653	False	NA	16	True	AATAAA	-22	NA	97208086	97266025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
ES.9816.44	chr13	+	4694	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	-2	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	100.611679536581	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTCAGTCTTCTCTGT	8653	False	NA	12	True	AATAAA	-18	NA	97208086	97266021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97221556_97221642_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.45	chr13	+	4478	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	-4	combination_of_known_splicesites	TRUE	canonical	1	4	junction_6	82.6210106750013	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGTCAGTCTTCTCT	8653	False	NA	10	True	AATAAA	-16	NA	97208086	97266019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.46	chr13	+	4255	10	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	88.1173460033078	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTCTTCTCTGTGTGT	8653	False	NA	16	True	AATAAA	-22	NA	97208086	97266025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.47	chr13	+	4257	11	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	86.9381964386195	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8655	False	NA	14	True	AATAAA	-20	NA	97208088	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.48	chr13	+	2116	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-60	-2391	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGATTCTAAACCTTC	8657	False	NA	9	True	AATAAA	-14	NA	97208090	97263632	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.49	chr13	+	4731	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-60	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	105.014003011038	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCAGTCTTCTCTGTG	8657	False	NA	13	True	AATAAA	-19	NA	97208090	97266022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97262641_97262767_97263003
ES.9816.5	chr13	+	4107	9	NIC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	137.032842778657	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTAGAATGTCAGTCTT	4362	False	NA	6	True	AATAAA	-12	NA	97203795	97266015	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97203831_97228325_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.50	chr13	+	5362	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-60	-714	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	73.1510518645418	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGTTTTAAATTTC	8657	False	NA	NA	False	ATTAAA	-24	NA	97208090	97266807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.51	chr13	+	4562	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-57	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	103.623081673706	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAGAATGTCAGTCTTC	8660	False	NA	7	True	AATAAA	-13	NA	97208093	97266016	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250622_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.52	chr13	+	4110	9	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	94.1488183675186	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8661	False	NA	14	True	AATAAA	-20	NA	97208094	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.53	chr13	+	3910	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-55	692	-55	-692	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTTTTGGTATTTT	8662	False	NA	NA	False	TTTAAA	-10	NA	97208095	97265331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.54	chr13	+	4475	12	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-55	2	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	102.899774714834	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTCTTCTCTGTGTGT	8662	False	NA	16	True	AATAAA	-22	NA	97208095	97266025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.55	chr13	+	4394	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-54	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	84.8036136763168	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAATGTCAGTCTTCT	8663	False	NA	8	True	AATAAA	-14	NA	97208096	97266017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97263003
ES.9816.56	chr13	+	1676	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-54	-714	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	78.0208589921299	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGTTTTAAATTTC	8663	False	NA	NA	False	ATTAAA	-24	NA	97208096	97266807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003_97263047_97266755
ES.9816.57	chr13	+	4433	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-54	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	83.4498909377398	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTTCTCTGTGTGTTC	8663	False	NA	18	True	AATAAA	-24	NA	97208096	97266027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.58	chr13	+	4440	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	103.497852903118	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8664	False	NA	14	True	AATAAA	-20	NA	97208097	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259330_97259401_97263003
ES.9816.59	chr13	+	1340	8	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-52	-6369	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	100.237880330049	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTGAGTACTTGATG	8665	False	NA	NA	False	AATAAA	-18	NA	97208098	97259654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97208220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199
ES.9816.6	chr13	+	4979	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-417	-15	-417	15	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTCACATTCTTCCA	8300	False	NA	29	True	AATAAA	-35	NA	97207733	97266038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.60	chr13	+	4475	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-52	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	81.2063557994214	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTGTGTTCACA	8665	False	NA	21	True	AATAAA	-27	NA	97208098	97266030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259330_97259401_97263003
ES.9816.61	chr13	+	4312	10	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-51	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	115.960188996477	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGTCAGTCTTCTCT	8666	False	NA	10	True	AATAAA	-16	NA	97208099	97266019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208296_97228325_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.62	chr13	+	4711	14	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	104.72601616379	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8669	False	NA	14	True	AATAAA	-20	NA	97208102	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97257847_97257964_97259199_97259401_97263003
ES.9816.63	chr13	+	7034	9	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-44	-1330	intron_retention	FALSE	canonical	2	25	junction_2	86.4363927984041	500	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTGGCTATTTGATAT	8673	False	NA	NA	False	NA	NA	NA	97208106	97264693	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97259401_97263003
ES.9816.64	chr13	+	4093	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-16	-719	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	81.1940405585424	512	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTCTTGTGTTTTAA	8701	False	NA	NA	False	ATTAAA	-19	NA	97208134	97266802	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97264252
ES.9816.67	chr13	+	5326	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	71	-724	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.5700250652775	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTCTAGTCTTGTGT	8788	False	NA	NA	False	ATTAAA	-14	NA	97208221	97266797	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208296_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.68	chr13	+	4758	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	72	6	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1676029903443	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTCTGTGTGTTCAC	8789	False	NA	20	True	AATAAA	-26	NA	97208222	97266029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.69	chr13	+	2152	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	85	-2386	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.5700250652775	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTAAACCTTCCACTG	8802	False	NA	14	True	AATAAA	-19	NA	97208235	97263637	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208296_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.7	chr13	+	5864	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-385	-932	-385	-566	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGATTACAGATTAAT	8332	False	NA	NA	False	AATAAA	-14	NA	97207765	97266955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.70	chr13	+	4538	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	79.5700250652775	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8802	False	NA	14	True	AATAAA	-20	NA	97208235	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208296_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.71	chr13	+	5588	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	165	-569	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1676029903443	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGGTGATTACAGATT	8882	False	NA	NA	False	AATAAA	-11	NA	97208315	97266952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.72	chr13	+	4494	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	299	-2	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	98.4702436723343	510	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTCAGTCTTCTCTGT	9016	False	NA	12	True	AATAAA	-18	NA	97208449	97266021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.73	chr13	+	5584	15	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	316	-569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	118.115323272794	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGGTGATTACAGATT	9033	False	NA	NA	False	AATAAA	-11	NA	97208466	97266952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97208497_97221556_97221642_97222044_97222107_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.74	chr13	+	157	1	Intergenic	novelGene_8195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	97210864	97211021	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97210900_97211000
ES.9816.75	chr13	+	4972	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	13462	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	79.2994938333292	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	NA	False	NA	14	True	AATAAA	-20	NA	97221612	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97222107_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.76	chr13	+	5850	12	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	16398	-2376	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	76.3929597379278	464	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCACTGGAACTTATTT	NA	False	NA	24	True	AATAAA	-29	NA	97224548	97263647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.77	chr13	+	5905	8	NIC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	18344	-6	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	127.96284537286	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAATGTCAGTCTTCT	NA	False	NA	8	True	AATAAA	-14	NA	97226494	97266017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.78	chr13	+	4168	10	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	21972	7	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	113.62120302909	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTGTGTTCACA	NA	False	NA	21	True	AATAAA	-27	NA	97230122	97266030	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.79	chr13	+	4159	9	ISM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	25895	0	25895	0	3prime_fragment	FALSE	canonical	3	256	junction_5	15.9765453086705	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	NA	False	NA	14	True	AATAAA	-20	NA	97234045	97266023	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.8	chr13	+	5709	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	-377	-785	-377	-713	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTTTTAAATTTCC	8340	False	NA	NA	False	ATTAAA	-25	NA	97207773	97266808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.80	chr13	+	4204	9	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	33952	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94.4747816880251	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTCTTCTCTGTGTGT	49	False	NA	16	True	AATAAA	-22	NA	97242102	97266025	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97242320_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9816.81	chr13	+	3922	8	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	38410	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	127.619651739864	494	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATGTCAGTCTTCTCT	579	False	NA	10	True	AATAAA	-16	NA	97246560	97266019	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97257847_97257999_97259199_97259401_97263003
ES.9816.82	chr13	+	226	1	Intergenic	novelGene_8197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCATTTTTTTTTTTTAT	9945	False	NA	NA	False	NA	NA	NA	97261312	97261538	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97261300_97261500
ES.9816.9	chr13	+	4680	14	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-376	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.014003011038	511	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTTCTCTGTGTGTTC	8341	False	NA	18	True	AATAAA	-24	NA	97207774	97266027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97207887_97219333_97219420_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ES.9817.1	chr13	+	3174	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	3	12	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAATTTACATGATTTCA	NA	False	NA	NA	False	AATAAA	-37	NA	97274447	97312971	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.10	chr13	+	1606	14	ISM	ENSMUSG00000021666.17	ENSMUST00000161825.8	4416	21	-17	17798	0	495	5prime_fragment	FALSE	canonical	3	50	junction_1	48.7239537459662	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGTAAAGTCTAAAGTTT	NA	False	NA	NA	False	AATAAA	-9	NA	97274492	97299905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582
ES.9817.11	chr13	+	2431	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	48	595	0	-595	multi-exon	FALSE	canonical	2	7	junction_10	59.2215428348002	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTTGGAGCTGCCAT	NA	False	NA	18	True	AGTAAA	-30	NA	97274492	97312354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.12	chr13	+	3113	11	NIC	ENSMUSG00000021666.17	novel	3074	20	NA	NA	-3	2244	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	89.0966329330127	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATCTTATAATCCAGA	NA	False	NA	NA	False	AAGAAA	-12	NA	97274502	97294229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97288142_97288233_97289735_97289825_97291697_97291759_97291928
ES.9817.14	chr13	+	4171	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	23	-1037	-1	2	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATATTTATATTTAT	NA	False	NA	NA	False	AAGAAA	-40	NA	97274508	97313996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.15	chr13	+	2947	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	24	186	0	-176	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGCCTGACATCTCTC	NA	False	NA	NA	False	NA	NA	NA	97274509	97312773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.16	chr13	+	3707	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	24	-574	0	-461	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCTGGCCCCACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	97274509	97313533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.19	chr13	+	3145	22	NNC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.9373985215634	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAACAGCCTAA	NA	False	NA	NA	False	AATAAA	-13	NA	97274510	97312947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97274535_97278104_97278163_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.2	chr13	+	3192	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	-35	0	6	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274450	97312959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.20	chr13	+	4057	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	3	-4	intron_retention	FALSE	canonical	0	0	junction_7	65.1617027094903	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAACAGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97274512	97312945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97288142_97288233_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.21	chr13	+	1802	16	FSM	ENSMUSG00000021666.17	ENSMUST00000161913.8	1829	16	20	7	3	-7	multi-exon	FALSE	canonical	3	138	junction_1	32.7972898609355	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATAATTACATCTCAC	NA	False	NA	NA	False	AATAAA	-12	NA	97274512	97304992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773
ES.9817.22	chr13	+	3177	22	NNC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63.8056146634842	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97274513	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97274568_97278104_97278163_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.23	chr13	+	3164	11	NNC	ENSMUSG00000021666.17	novel	1829	16	NA	NA	0	2244	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	83.9199618684375	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATCTTATAATCCAGA	NA	False	NA	NA	False	AAGAAA	-12	NA	97274515	97294229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97288142_97288264_97289735_97289825_97291697_97291759_97291928
ES.9817.24	chr13	+	3966	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	2	0	intron_retention	FALSE	canonical	3	138	junction_1	32.4223342193724	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97274517	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.25	chr13	+	5077	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	32	-1952	2	917	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATATATTGATTTAC	NA	False	NA	NA	False	AAGAAA	-28	NA	97274517	97314911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.26	chr13	+	2436	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	5	-595	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTTGGAGCTGCCAT	NA	False	NA	18	True	AGTAAA	-30	NA	97274520	97312354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.27	chr13	+	3349	21	NNC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.592126337262	211	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274534	97312959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97274809_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.28	chr13	+	3438	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	51.2320944330797	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97274535	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.29	chr13	+	4010	19	NIC	ENSMUSG00000021666.17	novel	3701	19	NA	NA	-12	19	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	53.6252428121931	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTGACTCTTGCCTTT	NA	False	NA	NA	False	TATAAA	-30	NA	97274535	97311160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447
ES.9817.3	chr13	+	2573	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	-21	605	20	-595	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTTGGAGCTGCCAT	NA	False	NA	18	True	AGTAAA	-30	NA	97274464	97312354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.30	chr13	+	2822	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	5	-599	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	51.2320944330797	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGACCCTTGGAGCTG	NA	False	NA	14	True	AGTAAA	-26	NA	97274552	97312350	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.31	chr13	+	217	1	Intergenic	novelGene_8198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTATTTAGGGTCTGCT	NA	False	NA	NA	False	NA	NA	NA	97281043	97281260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97281000_97281300
ES.9817.32	chr13	+	2898	18	ISM	ENSMUSG00000021666.17	ENSMUST00000022170.8	3089	21	7605	10	-4705	0	3prime_fragment	FALSE	canonical	3	140	junction_7	24.5690890838123	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97282152	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.33	chr13	+	174	1	Intergenic	novelGene_8199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	97287759	97287933	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97287800_97287900
ES.9817.34	chr13	+	2641	3	ISM	ENSMUSG00000021666.17	ENSMUST00000160981.2	765	8	2688	5181	2688	2244	internal_fragment	FALSE	canonical	3	167	junction_2	6	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGATCTTATAATCCAGA	NA	False	NA	NA	False	AAGAAA	-12	NA	97289545	97294229	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97289825_97291697_97291759_97291928
ES.9817.35	chr13	+	4570	1	NIC	ENSMUSG00000021666.17	novel	3074	20	NA	NA	2771	2213	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAACAAAAAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97289628	97294198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97289600_97294200
ES.9817.36	chr13	+	2438	13	ISM	ENSMUSG00000021666.17	ENSMUST00000022170.8	3089	21	17148	10	4838	0	3prime_fragment	FALSE	canonical	3	140	junction_2	27.6113905642017	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97291695	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.37	chr13	+	2170	11	NNC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.598402535528	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	2605	False	NA	NA	False	AATAAA	-15	NA	97296628	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301715_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.5	chr13	+	2943	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	-171	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGACATCTCTCTTTTA	NA	False	NA	NA	False	NA	NA	NA	97274485	97312778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.6	chr13	+	4051	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	-4	intron_retention	FALSE	canonical	0	0	junction_7	70.1530291576921	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAACAGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97274485	97312945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97288142_97288233_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.7	chr13	+	3204	22	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.6290762969945	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACAGCCTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	97274485	97312949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97288142_97288233_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.8	chr13	+	3043	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	41	-10	0	0	multi-exon	FALSE	canonical	2	7	junction_10	59.2215428348002	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274485	97312959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9817.9	chr13	+	3074	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274487	97312959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ES.9818.1	chr13	-	1133	1	FSM	ENSMUSG00000057762.7	ENSMUST00000071118.7	1030	1	-103	0	-103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAACGGCCGGGCATGGT	NA	False	NA	NA	False	NA	NA	NA	97235848	97234715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97234700_97235800
ES.9819.1	chr13	-	180	2	Antisense	novelGene_ENSMUSG00000021666.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1032	junction_1	0	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	97296459	97237189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_97237317_97296406
ES.9819.10	chr13	-	1119	5	NIC	ENSMUSG00000060739.9	novel	2700	6	NA	NA	4	-8	intron_retention	FALSE	canonical	3	555	junction_1	130.641446333084	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTTAGTTTGGGGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	97274356	97267499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97272217_97274262
ES.9819.11	chr13	-	2594	4	NIC	ENSMUSG00000060739.9	novel	2700	6	NA	NA	35	-615	intron_retention	FALSE	canonical	3	818	junction_3	101.334429818629	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTATCTAACAATTTT	NA	False	NA	NA	False	NA	NA	NA	97274325	97268106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97268544_97270046_97271953_97272028_97272217_97274262
ES.9819.12	chr13	-	213	1	Intergenic	novelGene_8200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCCGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	97296458	97296245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97296200_97296500
ES.9819.2	chr13	-	182	2	Antisense	novelGene_ENSMUSG00000021666.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	448	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	97296458	97237189	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_97237297_97296383
ES.9819.3	chr13	-	110	1	Intergenic	novelGene_8196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCCTTCACCGCCCTAA	NA	False	NA	NA	False	NA	NA	NA	97240348	97240238	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97240200_97240300
ES.9819.4	chr13	-	2632	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	68	0	4	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	False	NA	NA	False	AATAAA	-14	NA	97274377	97265931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ES.9819.5	chr13	-	1661	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	70	969	6	591	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTGCCTTTAACAGAAT	NA	False	NA	NA	False	AATACA	-13	NA	97274375	97266900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ES.9819.6	chr13	-	1329	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	68	1303	4	257	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAAAAGAGTGCACAAT	NA	False	NA	NA	False	ATTAAA	-21	NA	97274377	97267234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ES.9819.7	chr13	-	1210	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	69	1421	5	139	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTCAAGTATTTTCCA	NA	False	NA	NA	False	NA	NA	NA	97274376	97267352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ES.9819.8	chr13	-	1146	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	-7	1561	-7	-1	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGGGCATAACGGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	97274452	97267492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ES.982.1	chr1	+	179	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGAAACCAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88925364	88925543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88925400_88925500
ES.9820.1	chr13	-	188	1	Intergenic	novelGene_8201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAAGAAAC	NA	False	NA	1	True	NA	NA	NA	97298429	97298241	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97298200_97298400
ES.9821.1	chr13	-	6240	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-2	4188	intron_retention	FALSE	canonical	3	2035	junction_4	138.322364022919	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTCCGTGTTTTGTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	97334805	97308650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.10	chr13	-	4298	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	27	-5	intron_retention	FALSE	canonical	3	2035	junction_5	136.173321740049	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGGGCTGCCCTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	97334838	97312843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.11	chr13	-	2528	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-12	-6	intron_retention	FALSE	canonical	1	1	junction_9	703.811112902196	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGAGGGCTGCCCTGT	NA	False	NA	-5	True	AATAAA	-21	NA	97334877	97312844	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97327720_97327787_97330629_97330776_97334533
ES.9821.13	chr13	-	4196	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-8	intron_retention	FALSE	canonical	3	2035	junction_5	136.524632233936	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCCAGAGGGCTGCCCT	NA	False	NA	-7	True	AATAAA	-19	NA	97334837	97312846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.14	chr13	-	3962	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-8	intron_retention	FALSE	canonical	3	2035	junction_5	147.48929082849	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCCAGAGGGCTGCCCT	NA	False	NA	-7	True	AATAAA	-19	NA	97334837	97312846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97327787_97330629_97330776_97334533
ES.9821.15	chr13	-	1858	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	29	-70	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	642.382869851999	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAACACTGAATCTTTT	NA	False	NA	-4	True	AATAAA	-35	NA	97334836	97312908	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330577_97330776_97334533
ES.9821.16	chr13	-	4558	11	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-76	intron_retention	FALSE	canonical	3	2035	junction_5	142.283554917636	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTGAATCAAACACTGAA	NA	False	NA	-10	True	AATAAA	-29	NA	97334837	97312914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97327787_97330629_97330776_97334533
ES.9821.17	chr13	-	4140	12	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-78	intron_retention	FALSE	canonical	3	10	junction_6	694.907378333839	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCTGAATCAAACACTG	NA	False	NA	-12	True	AATAAA	-27	NA	97334837	97312916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97320329_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.19	chr13	-	1725	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	29	-78	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	645.602832824856	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCTGAATCAAACACTG	NA	False	NA	-12	True	AATAAA	-27	NA	97334774	97312916	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313087_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.2	chr13	-	4941	1	Genic_Genomic	ENSMUSG00000021665.10	novel	NA	NA	NA	NA	21212	4188	mono-exon	FALSE	NA	NA	NA	NA	NA	1029	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTCCGTGTTTTGTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	97313591	97308650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97308600_97313600
ES.9821.20	chr13	-	2956	1	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	18925	-84	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	1022	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTATCCCTGAATCAA	NA	False	NA	-18	True	AATAAA	-21	NA	97315878	97312922	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97312900_97315900
ES.9821.23	chr13	-	1872	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	-53	86	-53	-86	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334918	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.24	chr13	-	5227	4	ISM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	15620	86	15558	-86	intron_retention	FALSE	canonical	3	2329	junction_3	68.7475252079827	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97319245	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387
ES.9821.25	chr13	-	5099	7	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	8460	-86	intron_retention	FALSE	canonical	3	2202	junction_3	103.753982520619	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97326343	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469
ES.9821.28	chr13	-	4396	7	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	8741	-86	intron_retention	FALSE	canonical	3	2035	junction_3	159.365843963574	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97326062	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469
ES.9821.29	chr13	-	1805	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-86	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	644.007956876862	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334837	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320329_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.3	chr13	-	6033	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	60	-4188	-2	4188	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTTCCGTGTTTTGTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	97334805	97308650	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.30	chr13	-	1825	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-12	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	648.581583924426	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334877	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325855_97327720_97327787_97330629_97330776_97334533
ES.9821.32	chr13	-	1574	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-30	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	645.602832824856	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334833	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97312947_97313366_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.33	chr13	-	2493	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-10	-86	intron_retention	FALSE	canonical	3	2035	junction_5	132.195877394115	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334875	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.34	chr13	-	1785	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	644.722976150479	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334837	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314557_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.35	chr13	-	5908	9	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	4027	-86	intron_retention	FALSE	canonical	3	2035	junction_5	154.816625399212	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97330776	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97320315_97322075_97322178_97325469_97327787_97330629
ES.9821.37	chr13	-	1751	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-1	-86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	650.163948372496	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334804	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325574_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.38	chr13	-	1617	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	113	-86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	650.840421637954	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334690	97312924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317654_97318344_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.4	chr13	-	6839	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-3	4175	intron_retention	FALSE	canonical	3	2035	junction_4	138.053888149005	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACAGAAAAACAGCTTT	NA	False	NA	NA	False	AGTAAA	-11	NA	97334806	97308663	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.40	chr13	-	5769	9	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-87	intron_retention	FALSE	canonical	3	2314	junction_5	80.5247438679565	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTCTATCCCTGAAT	NA	False	NA	-21	True	AATAAA	-18	NA	97334837	97312925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313655_97314387_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.41	chr13	-	4877	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-2	-88	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	647.155843974643	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTCTATCCCTGAA	NA	False	NA	-22	True	AATAAA	-17	NA	97334805	97312926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322457_97322628_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.43	chr13	-	2688	5	ISM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	16868	88	16806	-88	intron_retention	FALSE	canonical	3	2329	junction_3	76.3360170561708	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTCTATCCCTGAA	NA	False	NA	-22	True	AATAAA	-17	NA	97317997	97312926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851
ES.9821.45	chr13	-	5730	7	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	8807	-88	intron_retention	FALSE	canonical	3	2035	junction_5	163.374569624529	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTCTATCCCTGAA	NA	False	NA	-22	True	AATAAA	-17	NA	97325996	97312926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97322178_97325469
ES.9821.46	chr13	-	1781	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	27	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	650.110213687517	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTCTATCCCTGAA	NA	False	NA	-22	True	AATAAA	-17	NA	97334838	97312926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334542
ES.9821.47	chr13	-	2145	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	336	-88	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	650.110213687517	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTCTATCCCTGAA	NA	False	NA	-22	True	AATAAA	-17	NA	97334467	97312926	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97333807
ES.9821.48	chr13	-	5876	11	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-89	intron_retention	FALSE	canonical	3	2035	junction_5	140.804154768245	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATCTTTCTATCCCTGA	NA	False	NA	-23	True	AATAAA	-16	NA	97334837	97312927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.49	chr13	-	8091	8	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-2	-89	intron_retention	FALSE	canonical	3	2035	junction_4	165.96077726932	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATCTTTCTATCCCTGA	NA	False	NA	-23	True	AATAAA	-16	NA	97334805	97312927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97314563_97315851_97315925_97317589_97322178_97325469_97327787_97330629_97330776_97334533
ES.9821.5	chr13	-	3345	14	NNC	ENSMUSG00000021665.10	novel	727	6	NA	NA	27	2531	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	645.081316831796	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGTCTGGTCTTGAG	NA	False	NA	NA	False	ATTAAA	-27	NA	97334838	97310307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97312034_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.50	chr13	-	5997	10	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-2	-90	intron_retention	FALSE	canonical	3	2035	junction_4	148.231800456807	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCTTTCTATCCCTG	NA	False	NA	-24	True	AATAAA	-15	NA	97334805	97312928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97314563_97315851_97315925_97317589_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.51	chr13	-	1391	13	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	5519	-90	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_12	667.954272179033	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCTTTCTATCCCTG	NA	False	NA	-24	True	AATAAA	-15	NA	97329284	97312928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97329230
ES.9821.52	chr13	-	1994	10	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	8467	-90	intron_retention	FALSE	canonical	3	10	junction_8	753.842224053172	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCTTTCTATCCCTG	NA	False	NA	-24	True	AATAAA	-15	NA	97326336	97312928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320329_97322075_97322178_97325469
ES.9821.53	chr13	-	7323	7	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	6740	-90	intron_retention	FALSE	canonical	3	2035	junction_4	156.557142567463	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCTTTCTATCCCTG	NA	False	NA	-24	True	AATAAA	-15	NA	97328063	97312928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97315925_97317589_97320315_97322075_97322178_97325469
ES.9821.55	chr13	-	1941	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-90	intron_retention	FALSE	canonical	3	2035	junction_4	142.515569324899	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCTTTCTATCCCTG	NA	False	NA	-24	True	AATAAA	-15	NA	97334837	97312928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.56	chr13	-	3734	11	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	27	-91	intron_retention	FALSE	canonical	3	14	junction_10	722.41193234885	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAATCTTTCTATCCCT	NA	False	NA	-25	True	AATAAA	-14	NA	97334838	97312929	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97327787_97334533
ES.9821.57	chr13	-	1681	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	27	-92	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	668.867990629608	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGAATCTTTCTATCCC	NA	False	NA	-26	True	AATAAA	-13	NA	97334838	97312930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.58	chr13	-	2507	4	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	16761	-92	intron_retention	FALSE	canonical	3	2035	junction_3	190.934543757802	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGAATCTTTCTATCCC	NA	False	NA	-26	True	AATAAA	-13	NA	97318042	97312930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313655_97314387_97315925_97317589
ES.9821.6	chr13	-	4407	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	28	-2530	28	2530	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATACTGTCTGGTCTTGA	NA	False	NA	NA	False	ATTAAA	-26	NA	97334837	97310308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.60	chr13	-	7427	8	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	28	-92	intron_retention	FALSE	canonical	3	2314	junction_4	83.7167235139931	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGAATCTTTCTATCCC	NA	False	NA	-26	True	AATAAA	-13	NA	97334837	97312930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313655_97314387_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.61	chr13	-	1664	14	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-988	-92	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	649.067916140764	1039	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGAATCTTTCTATCCC	NA	False	NA	-26	True	AATAAA	-13	NA	97335853	97312930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97335670
ES.9821.62	chr13	-	1867	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-1	-184	intron_retention	FALSE	canonical	3	2035	junction_4	138.322364022919	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTCCAGCTATGAT	NA	False	NA	-6	True	AATAAA	-21	NA	97334804	97313022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.63	chr13	-	1655	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	61	189	-1	-189	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTACAGCATTCCAGCT	NA	False	NA	-11	True	AATAAA	-16	NA	97334804	97313027	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.64	chr13	-	906	8	ISM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	61	5650	-1	1695	5prime_fragment	FALSE	canonical	3	2314	junction_4	79.389507351734	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTAAAACTCAAGTG	NA	False	NA	NA	False	NA	NA	NA	97334804	97318488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.65	chr13	-	6535	5	NNC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	39	-2083	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1015.40395286802	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGATTGGAAGCAATCC	NA	False	NA	NA	False	NA	NA	NA	97334764	97322266	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_97325581_97325813_97325861_97327720_97329815_97329926_97330776_97334533
ES.9821.66	chr13	-	3783	1	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	8720	-2117	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	990	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97326083	97322300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97322300_97326100
ES.9821.7	chr13	-	4579	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	-2	2527	intron_retention	FALSE	canonical	3	2035	junction_4	138.322364022919	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAATACTGTCTGGTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	97334805	97310311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.8	chr13	-	1933	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	-13	-15	-13	15	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACTGTCATCTTGCAA	NA	False	NA	16	True	AATAAA	-42	NA	97334878	97312823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ES.9821.9	chr13	-	1730	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	27	-2	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	664.703750846111	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGGCTGCCCTGTGTGG	NA	False	NA	-1	True	AATAAA	-25	NA	97334838	97312840	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97334533
ES.9822.1	chr13	+	179	1	Intergenic	novelGene_8202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	97345831	97346010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97345800_97346000
ES.9823.1	chr13	+	1202	1	Intergenic	novelGene_8203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGGTGATAGTTCCAA	NA	False	NA	NA	False	NA	NA	NA	97349418	97350620	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97349400_97350600
ES.9824.1	chr13	-	176	1	Intergenic	novelGene_8204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97355033	97354857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97354900_97355000
ES.9825.1	chr13	+	2520	3	NNC	ENSMUSG00000041773.9	novel	4737	3	NA	NA	-20861	-1873	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTGTTCTAGATTT	NA	False	NA	NA	False	TTTAAA	-17	NA	97356751	97387669	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97356833_97381478_97383293_97387044
ES.9825.2	chr13	+	208	1	Intergenic	novelGene_8205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCTTCTAGAGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	97356771	97356979	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97356800_97357000
ES.9825.3	chr13	+	162	1	Intergenic	novelGene_8206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	97367749	97367911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97367700_97367900
ES.9825.4	chr13	+	4742	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	1	-6	1	6	multi-exon	FALSE	canonical	3	5	junction_1	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATTGTGAGTTTTTATT	NA	False	NA	28	True	AATAAA	-22	NA	97377613	97389548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97378038_97381478_97383293_97387044
ES.9825.5	chr13	+	4154	2	ISM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	4	4331	4	-4331	5prime_fragment	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTATTTCATTTGCG	NA	False	NA	NA	False	AATAAA	-13	NA	97377616	97385211	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97378038_97381478
ES.9826.1	chr13	-	177	1	Intergenic	novelGene_8207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	97369549	97369372	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97369400_97369500
ES.9827.1	chr13	+	174	1	Intergenic	novelGene_8208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	97433095	97433269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97433100_97433300
ES.9828.1	chr13	-	3970	1	Intergenic	novelGene_8209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97492035	97488065	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97488100_97492000
ES.9829.1	chr13	+	210	1	Intergenic	novelGene_8210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97526554	97526764	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97526600_97526800
ES.983.1	chr1	-	1980	10	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.09644025156813	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTGTGATTTGTATA	NA	False	NA	NA	False	NA	NA	NA	88943746	88907461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88908199_88908850_88908949_88911675_88911847_88917124_88917197_88917833_88917882_88918731_88919154_88919383_88919501_88930733_88930857_88931991_88932132_88943694
ES.983.2	chr1	-	2782	7	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.19215773966098	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTATGTAGTTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	88943744	88907562	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88908949_88909141_88909428_88911675_88911847_88917124_88917197_88917833_88917882_88918731_88919501_88943694
ES.983.3	chr1	-	1209	3	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTTTTCTCGGGTGTT	NA	False	NA	NA	False	NA	NA	NA	88943726	88918455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88919501_88930733_88930866_88943694
ES.983.4	chr1	-	735	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	88922234	88921499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88921500_88922200
ES.9830.1	chr13	+	218	1	Intergenic	novelGene_8211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTAGCCACATGTCA	NA	False	NA	NA	False	NA	NA	NA	97551040	97551258	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97551000_97551300
ES.9831.1	chr13	+	173	1	Intergenic	novelGene_8212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTAAATTGCCCT	NA	False	NA	NA	False	NA	NA	NA	97553147	97553320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97553100_97553300
ES.9832.1	chr13	-	164	1	Intergenic	novelGene_8213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATCTT	3930	False	NA	NA	False	NA	NA	NA	97584169	97584005	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97584000_97584200
ES.9833.1	chr13	-	3444	7	Intergenic	novelGene_8214	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	10.4562580942387	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTTGTGTCACGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	97619011	97588763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97591373_97592307_97592439_97596691_97596774_97615652_97615981_97618046_97618132_97618599_97618764_97618966
ES.9833.10	chr13	-	2149	3	Antisense	novelGene_ENSMUSG00000078952.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	3.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	97619023	97616203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_97618132_97618599_97618764_97618966
ES.9833.2	chr13	-	6833	1	FSM	ENSMUSG00000098238.2	ENSMUST00000183250.2	929	1	-15	-5889	-15	5889	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGTTGTTTTGTGTCACG	NA	False	NA	NA	False	AATAAA	-11	NA	97595600	97588767	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97588800_97595600
ES.9833.3	chr13	-	3056	6	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23495	1540	multi-exon	FALSE	canonical	1	1	junction_3	9.72830920561225	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGGCGACTATATT	NA	False	NA	NA	False	AATACA	-10	NA	97619080	97593116	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97595665_97596691_97596774_97597775_97597839_97618046_97618132_97618599_97618764_97618966
ES.9833.4	chr13	-	3438	1	FSM	ENSMUSG00000098238.2	ENSMUST00000183250.2	929	1	-990	-1519	-990	1519	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAATACAATCTTCCA	NA	False	NA	NA	False	AATAAA	-35	NA	97596575	97593137	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97593100_97596600
ES.9833.5	chr13	-	3449	5	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23416	1502	multi-exon	FALSE	canonical	0	0	junction_1	10.1242283656583	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCTTGATCTTCCTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	97619001	97593154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97596238_97596691_97596774_97618046_97618132_97618599_97618764_97618966
ES.9833.6	chr13	-	2759	5	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23448	1353	multi-exon	FALSE	canonical	2	7	junction_2	7.69334127671456	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATAAGATGGGATGA	NA	False	NA	NA	False	AAAACA	-12	NA	97619033	97593303	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97595665_97596691_97596774_97618046_97618132_97618599_97618764_97618966
ES.9833.7	chr13	-	1916	5	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23517	521	multi-exon	FALSE	canonical	2	7	junction_2	7.39509972887452	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCAAAGTTTCCGGTT	NA	False	NA	NA	False	NA	NA	NA	97619102	97594135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97595665_97596691_97596774_97618046_97618132_97618599_97618764_97619046
ES.9833.8	chr13	-	4389	2	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-3700	214	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAACAATACAGGGCTCT	NA	False	NA	NA	False	AATAAA	-29	NA	97599285	97594442	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97596238_97596691
ES.9833.9	chr13	-	1669	6	Genic_Genomic	ENSMUSG00000098238.2	novel	929	1	NA	NA	-23527	201	multi-exon	FALSE	canonical	1	1	junction_3	9.06421535489973	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACACAAAAAAATAATAAC	NA	False	NA	NA	False	AATAAA	-16	NA	97619112	97594455	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97595665_97596691_97596774_97597775_97597839_97618046_97618132_97618599_97618764_97619046
ES.9834.1	chr13	+	2730	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	50	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTCAGTATAGTCATTT	NA	False	NA	71	True	ACTAAA	-18	NA	97619208	97633565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97619286_97630912
ES.9834.10	chr13	+	3401	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	1	-638	1	638	multi-exon	FALSE	canonical	3	54	junction_2	70.5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAATTCTGAAACACAAT	NA	False	NA	24	True	AATACA	-23	NA	97619209	97634153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97619286_97619456_97619541_97630912
ES.9834.11	chr13	+	4088	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	1	750	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTTGAGTCTCTAATT	NA	False	NA	136	True	NA	NA	NA	97619209	97634265	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ES.9834.13	chr13	+	3253	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619210	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97629663_97630239_97630912
ES.9834.14	chr13	+	1825	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	2	937	2	-937	multi-exon	FALSE	canonical	3	54	junction_2	70.5	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAATGTTTTGTCTGT	NA	False	NA	14	True	AAAAAG	-18	NA	97619210	97632578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97619286_97619456_97619541_97630912
ES.9834.15	chr13	+	2887	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	4	-364	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCAATGTCCTTTCT	NA	False	NA	8	True	NA	NA	NA	97619212	97633151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97629663_97630239_97630912
ES.9834.16	chr13	+	5063	5	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	8	-2490	multi-exon	FALSE	canonical	0	0	junction_2	82.1929893604071	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGGCAGCCATGGTT	NA	False	NA	6	True	NA	NA	NA	97619216	97649748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97619456_97619541_97638796_97638947_97640400_97640521_97645108
ES.9834.17	chr13	+	2560	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	12	-937	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	82.6755707570259	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAATGTTTTGTCTGT	NA	False	NA	14	True	AAAAAG	-18	NA	97619220	97632578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97630239_97630912
ES.9834.18	chr13	+	2955	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	16	-368	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGATGCAATGTCCT	NA	False	NA	4	True	NA	NA	NA	97619224	97633147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ES.9834.19	chr13	+	5690	8	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	16	-2488	multi-exon	FALSE	canonical	1	2	junction_2	55.5363458852463	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97619224	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97629663_97629744_97630134_97630239_97630912_97631105_97635585_97635936_97636752_97636894_97640400_97640521_97645108
ES.9834.2	chr13	+	3351	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	12	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCTCTTCCTATACTAA	NA	False	NA	33	True	AATAAA	-30	NA	97619208	97633527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ES.9834.20	chr13	+	3630	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	19	-364	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	6.5	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCAATGTCCTTTCT	NA	False	NA	8	True	NA	NA	NA	97619227	97633151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663
ES.9834.21	chr13	+	2745	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	19	0	19	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619227	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97619286_97619456_97619541_97630912
ES.9834.22	chr13	+	3034	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	34	-945	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	6.5	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGTGAATGAATGTT	NA	False	NA	6	True	AAAAAG	-10	NA	97619242	97632570	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663
ES.9834.23	chr13	+	3267	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	42	629	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCACTGTGATAATTCTG	NA	False	NA	15	True	AATACA	-14	NA	97619250	97634144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97619286_97630912
ES.9834.24	chr13	+	3982	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	48	1186	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGATGGCACTGG	NA	False	NA	3	True	AATAAA	-14	NA	97619256	97634701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ES.9834.25	chr13	+	1691	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	49	-940	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAATGAATGTTTTGTC	NA	False	NA	11	True	AAAAAG	-15	NA	97619257	97632575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97619286_97630912
ES.9834.26	chr13	+	1855	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	49	-940	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAATGAATGTTTTGTC	NA	False	NA	11	True	AAAAAG	-15	NA	97619257	97632575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ES.9834.27	chr13	+	3838	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	48	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	97.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTCTCAGTATAGTCAT	NA	False	NA	69	True	ACTAAA	-16	NA	97619258	97633563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97620617_97630912
ES.9834.28	chr13	+	3588	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	624	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	74.6537842309417	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTCACTGTGATAA	NA	False	NA	10	True	AATACA	-9	NA	97619258	97634139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97629744_97630912
ES.9834.29	chr13	+	2962	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	7	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619258	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97629663_97629996_97630912
ES.9834.3	chr13	+	3289	8	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	7845	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	88.013681682255	417	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTCGCTTATCGTGG	NA	False	NA	0	True	NA	NA	NA	97619208	97641360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912_97632409_97635585_97635936_97636752_97636894_97640400_97640521_97640914
ES.9834.30	chr13	+	3431	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	84.2496290793022	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGTCACTGTGATAA	NA	False	NA	10	True	AATACA	-9	NA	97619258	97634139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619545_97629654_97629744_97630912
ES.9834.31	chr13	+	3152	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.1837140755084	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATATTGCGAACTCAAG	NA	False	NA	16	True	AATAAA	-13	NA	97619258	97633510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619293_97619456_97619541_97629663_97629996_97630134_97630239_97630912
ES.9834.32	chr13	+	3128	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	-331	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	82.6755707570259	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCATCTCTTTAGTG	NA	False	NA	41	True	NA	NA	NA	97619258	97633184	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97630239_97630912
ES.9834.33	chr13	+	3900	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	50	-1186	50	1186	multi-exon	FALSE	canonical	3	54	junction_2	70.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGATGGCACTGG	NA	False	NA	3	True	AATAAA	-14	NA	97619258	97634701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_97619286_97619456_97619541_97630912
ES.9834.34	chr13	+	3677	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	50	631	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	84.7833841163599	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGATAATTCTGAA	NA	False	NA	17	True	AATACA	-16	NA	97619258	97634146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629996_97630912
ES.9834.35	chr13	+	1029	4	NNC	ENSMUSG00000078952.10	novel	492	3	NA	NA	51	1912	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.5912222898061	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAATTCCTGTCTTGC	NA	False	NA	NA	False	AATAAA	-44	NA	97619259	97628120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97627371
ES.9834.36	chr13	+	3437	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	631	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	95.5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGATAATTCTGAA	NA	False	NA	17	True	AATACA	-16	NA	97619259	97634146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619634_97630912
ES.9834.37	chr13	+	3388	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	82.174610839764	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAAGACCTCTTCCTAT	NA	False	NA	28	True	AATAAA	-25	NA	97619259	97633522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619634_97629663_97630239_97630912
ES.9834.38	chr13	+	2804	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	95.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGCGAACTCAAGACC	NA	False	NA	19	True	AATAAA	-16	NA	97619259	97633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619634_97630912
ES.9834.39	chr13	+	3095	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	50	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	84.7833841163599	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTCAGTATAGTCATTT	NA	False	NA	71	True	ACTAAA	-18	NA	97619259	97633565	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629996_97630912
ES.9834.4	chr13	+	5374	7	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-2488	multi-exon	FALSE	canonical	1	1	junction_2	70.2969890298771	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97619208	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97619456_97619541_97635775_97635936_97636752_97636894_97638796_97638947_97640400_97640521_97645108
ES.9834.41	chr13	+	6371	7	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	-3051	multi-exon	FALSE	canonical	0	0	junction_3	68.5654593962749	459	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTCAAGGGCTCTCATT	NA	False	NA	NA	False	AAGAAA	-9	NA	97619259	97649187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97619456_97619541_97630912_97632411_97638796_97638947_97640400_97640521_97643210_97643625_97645108
ES.9834.42	chr13	+	5622	10	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	-2488	multi-exon	FALSE	canonical	0	0	junction_4	73.3082448666731	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97619259	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97619456_97619634_97629663_97630239_97630912_97632409_97635585_97635666_97635775_97635936_97636752_97636894_97640400_97640521_97645108_97645250_97647044
ES.9834.43	chr13	+	2963	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	74.6537842309417	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619259	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97629744_97630912
ES.9834.44	chr13	+	7544	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	7847	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	72.3064466159292	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTCGCTTATCGTGGGT	NA	False	NA	2	True	NA	NA	NA	97619259	97641362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97629663_97630239_97630912_97636894_97640400
ES.9834.45	chr13	+	4180	2	ISM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	52	9904	52	-2597	5prime_fragment	FALSE	canonical	3	195	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGACATTTTGTATTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	97619260	97623611	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_97619286_97619456
ES.9834.46	chr13	+	3922	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	52	635	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGATAATTCTGAAACAC	NA	False	NA	21	True	AATACA	-20	NA	97619260	97634150	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ES.9834.47	chr13	+	4471	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	52	1184	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTCTGATGGCACT	NA	False	NA	1	True	AATAAA	-12	NA	97619260	97634699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
ES.9834.48	chr13	+	3421	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	52	629	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCACTGTGATAATTCTG	NA	False	NA	15	True	AATACA	-14	NA	97619260	97634144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ES.9834.49	chr13	+	4528	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	53	-5	intron_retention	FALSE	canonical	1	1	junction_1	82.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAATATTGCGAACTCAAG	NA	False	NA	16	True	AATAAA	-13	NA	97619261	97633510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97620617_97629663_97630239_97630912
ES.9834.5	chr13	+	2892	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	48	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTCTCAGTATAGTCAT	NA	False	NA	69	True	ACTAAA	-16	NA	97619208	97633563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
ES.9834.50	chr13	+	7893	11	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	57	-2477	multi-exon	FALSE	canonical	0	0	junction_4	80.1691337111734	463	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTTGTTCTAGCTTAC	NA	False	NA	19	True	NA	NA	NA	97619265	97649761	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912_97632409_97635585_97635666_97635775_97635936_97636752_97636894_97638796_97638947_97640400_97640521_97643210_97643625_97645108
ES.9834.51	chr13	+	3827	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	57	629	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCACTGTGATAATTCTG	NA	False	NA	15	True	AATACA	-14	NA	97619265	97634144	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97629663_97630239_97630912
ES.9834.52	chr13	+	3953	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	-8	1184	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	71.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTCTGATGGCACT	NA	False	NA	1	True	AATAAA	-12	NA	97619454	97634699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619541_97629663_97629744_97630912
ES.9834.53	chr13	+	6776	6	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	54	-2488	multi-exon	FALSE	canonical	0	0	junction_3	67.8333251433246	463	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97619516	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97619541_97629663_97629744_97630912_97632409_97640400_97640521_97643210_97643625_97645108
ES.9834.54	chr13	+	7460	1	Genic_Genomic	ENSMUSG00000078952.10	novel	NA	NA	NA	NA	1198	1912	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAATTCCTGTCTTGC	NA	False	NA	NA	False	AATAAA	-44	NA	97620660	97628120	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_97620700_97628100
ES.9834.55	chr13	+	11130	1	NIC	ENSMUSG00000078952.10	novel	2726	2	NA	NA	2559	-364	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCAATGTCCTTTCT	NA	False	NA	8	True	NA	NA	NA	97622021	97633151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97622000_97633200
ES.9834.56	chr13	+	2982	3	NNC	ENSMUSG00000078952.10	novel	492	3	NA	NA	6222	-368	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	76.5	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGGATGCAATGTCCT	NA	False	NA	4	True	NA	NA	NA	97625684	97633147	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97625857_97629663_97630239_97630912
ES.9834.57	chr13	+	4457	2	NNC	ENSMUSG00000078952.10	novel	2726	2	NA	NA	8920	-2	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_1	0	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTGCGAACTCAAGACC	NA	False	NA	19	True	AATAAA	-16	NA	97628382	97633513	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97630239_97630912
ES.9834.58	chr13	+	4124	1	NIC	ENSMUSG00000078952.10	novel	2726	2	NA	NA	9929	0	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97629391	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97629400_97633500
ES.9834.59	chr13	+	3236	4	NNC	ENSMUSG00000078952.10	novel	2726	2	NA	NA	10081	675	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	18.3847763108502	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGGCTTTTGCAGCAT	NA	False	NA	61	True	NA	NA	NA	97629543	97634190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97629744_97630912_97631921_97632118_97632163_97632206
ES.9834.6	chr13	+	4402	1	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	-2598	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGACATTTTGTATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	97619208	97623610	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97619200_97623600
ES.9834.60	chr13	+	5764	6	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	11545	-2488	multi-exon	FALSE	canonical	1	2	junction_1	4.4	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97631007	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97631105_97635585_97635936_97636752_97636894_97640400_97640521_97643210_97643625_97645108
ES.9834.61	chr13	+	8861	8	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	11551	-2490	multi-exon	FALSE	canonical	0	0	junction_1	5.06689938599091	438	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGGCAGCCATGGTT	NA	False	NA	6	True	NA	NA	NA	97631013	97649748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97632409_97635585_97635666_97635775_97635936_97636752_97636894_97637035_97638947_97640400_97640521_97643210_97643625_97645108
ES.9834.62	chr13	+	6862	7	Fusion	ENSMUSG00000114926.2_ENSMUSG00000078952.10	novel	2764	3	NA	NA	11639	-2490	multi-exon	FALSE	canonical	0	0	junction_1	5.21749194749951	438	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGGCAGCCATGGTT	NA	False	NA	6	True	NA	NA	NA	97631101	97649748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_+_97632409_97635585_97635666_97635775_97635936_97636752_97636894_97640400_97640521_97643210_97643625_97645108
ES.9834.63	chr13	+	5544	5	NNC	ENSMUSG00000114926.2	novel	463	2	NA	NA	-14020	-2488	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	5.1234753829798	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97633691	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97635936_97636752_97636894_97640400_97640521_97643210_97643625_97647125
ES.9834.64	chr13	+	4036	1	Intergenic	novelGene_8215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAAATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	97633923	97637959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97633900_97638000
ES.9834.65	chr13	+	6749	1	Intergenic	novelGene_8216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTATCGTGGGTATTT	NA	False	NA	6	True	NA	NA	NA	97634617	97641366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97634600_97641400
ES.9834.66	chr13	+	4502	5	NNC	ENSMUSG00000114926.2	novel	463	2	NA	NA	-12897	-2488	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_4	4.52769256906871	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97634814	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97635936_97636752_97636894_97640400_97640521_97643210_97643625_97647044
ES.9834.67	chr13	+	5020	4	NNC	ENSMUSG00000114926.2	novel	463	2	NA	NA	-10103	-2490	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.77123616632825	89	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGGCAGCCATGGTT	NA	False	NA	6	True	NA	NA	NA	97637608	97649748	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97637719_97638796_97638947_97640400_97640521_97645108
ES.9834.68	chr13	+	2264	2	Intergenic	novelGene_8217	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGCTTATCGTGGGTAT	NA	False	NA	4	True	NA	NA	NA	97638952	97641364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97640253_97640400
ES.9834.69	chr13	+	6282	3	NNC	ENSMUSG00000114926.2	novel	463	2	NA	NA	-8417	-2488	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	1.5	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97639294	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97640521_97643210_97643625_97645108
ES.9834.7	chr13	+	7910	1	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	910	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTATTCCATCTGCT	NA	False	NA	6	True	AATACA	-17	NA	97619208	97627118	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_97619200_97627100
ES.9834.70	chr13	+	857	2	Intergenic	novelGene_8218	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGCTTTTGTTCTGA	NA	False	NA	NA	False	NA	NA	NA	97643134	97645475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97643625_97645108
ES.9834.71	chr13	+	4039	2	NNC	ENSMUSG00000114926.2	novel	463	2	NA	NA	-2149	-2488	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGGCAGCCATGGTTTG	NA	False	NA	8	True	NA	NA	NA	97645562	97649750	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97645764_97645912
ES.9834.72	chr13	+	2974	1	Genic_Genomic	ENSMUSG00000114926.2	novel	NA	NA	NA	NA	-1080	-2633	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATTGTTTGATCCTTA	NA	False	NA	NA	False	NA	NA	NA	97646631	97649605	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_97646600_97649600
ES.9834.8	chr13	+	3515	5	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	82.6755707570259	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCAAGACCTCTTCCTA	NA	False	NA	27	True	AATAAA	-24	NA	97619208	97633521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97625686_97625857_97629663_97630239_97630912
ES.9834.9	chr13	+	4012	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	6.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619209	97633515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_97619286_97619456_97619541_97629663
ES.9835.1	chr13	-	178	1	Intergenic	novelGene_8219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	97661370	97661192	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97661200_97661400
ES.9836.1	chr13	+	264	1	Intergenic	novelGene_8220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	TTTAAA	-10	NA	97726511	97726775	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97726500_97726800
ES.9837.1	chr13	-	179	1	Intergenic	novelGene_8221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAGAATAAG	7298	False	NA	NA	False	NA	NA	NA	97753334	97753155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97753200_97753300
ES.9838.1	chr13	+	3226	1	Intergenic	novelGene_8222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTCTCATGTTGT	NA	False	NA	NA	False	NA	NA	NA	97799392	97802618	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97799400_97802600
ES.9839.1	chr13	-	281	1	Intergenic	novelGene_8223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATTCTGCAGTAAT	NA	False	NA	NA	False	TATAAA	-8	NA	97848894	97848613	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97848600_97848900
ES.9839.2	chr13	-	175	1	Intergenic	novelGene_8224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	97848894	97848719	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97848700_97848900
ES.984.1	chr1	-	144	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	88947390	88947246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88947200_88947400
ES.9840.1	chr13	-	491	2	Genic_Genomic	ENSMUSG00000069117.5	novel	561	1	NA	NA	1	-15	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAATAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	97897139	97896594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97896816_97896869
ES.9840.2	chr13	-	347	2	Genic_Genomic	ENSMUSG00000069117.5	novel	561	1	NA	NA	3	-15	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAATAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	97897137	97896594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_97896644_97896839
ES.9840.3	chr13	-	545	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	1	15	1	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAAATAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	97897139	97896594	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_97896600_97897100
ES.9841.1	chr13	-	5009	1	Intergenic	novelGene_8225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTCCTTTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	97943023	97938014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_97938000_97943000
ES.9842.1	chr13	+	5025	1	Intergenic	novelGene_8226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	97984751	97989776	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_97984800_97989800
ES.9843.1	chr13	-	4331	30	NNC	ENSMUSG00000021662.12	novel	5387	36	NA	NA	2570	24	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	0.84746246396169	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCTCCGCGCGTGTGTC	NA	False	NA	NA	False	ATTAAA	-30	NA	98166617	98035952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98036325_98065918_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082249_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098012_98102007_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319_98133442_98165884_98165946_98166383_98166440_98166548
ES.9843.2	chr13	-	4457	30	NNC	ENSMUSG00000021662.12	novel	5387	36	NA	NA	2604	21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.851661312774377	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCCAGCTCCGCGCGTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	98166583	98035955	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98036325_98065918_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082276_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098056_98101915_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319_98133442_98165884_98165946_98166383_98166440_98166548
ES.9843.3	chr13	-	5043	35	ISM	ENSMUSG00000021662.12	ENSMUST00000109426.3	5387	36	15	29923	15	-762	5prime_fragment	FALSE	canonical	0	0	junction_1	0.776492869555534	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGTGATGTCAATG	NA	False	NA	NA	False	TATAAA	-24	NA	98342660	98065899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082249_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098056_98101915_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319_98133442_98165884_98165946_98166383_98166440_98180307_98180375_98187453_98187635_98190298_98190483_98211506_98211801_98213680_98213829_98282059_98282104_98342580
ES.9843.4	chr13	-	1238	9	ISM	ENSMUSG00000021662.12	ENSMUST00000225884.2	5307	35	11	129810	11	-51133	5prime_fragment	FALSE	canonical	0	0	junction_1	0.330718913883074	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGAGAACCTTGCTTG	NA	False	NA	NA	False	AAAAAG	-26	NA	98342936	98165786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98165946_98166383_98166440_98180307_98180375_98187453_98187635_98190298_98190483_98211506_98211801_98213680_98213829_98282059_98282104_98342831
ES.9843.5	chr13	-	2949	1	Intergenic	novelGene_8227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98177651	98174702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_98174700_98177700
ES.9844.1	chr13	-	4179	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	-4	-55	-4	55	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTAAATTTTTTTTTT	NA	False	NA	2	True	ATTAAA	-28	NA	98399553	98383297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.10	chr13	-	3428	14	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	22	19	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	117.624263889817	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTAAAATGAAGTAGTT	NA	False	NA	-34	True	ATTAAA	-17	NA	98399499	98383333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98383825_98384485_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.11	chr13	-	4453	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	0	19	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_12	110.385026913376	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTAAAATGAAGTAGTT	NA	False	NA	-34	True	ATTAAA	-17	NA	98399521	98383333	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399040
ES.9844.12	chr13	-	5987	12	ISM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	55	-18	27	18	intron_retention	FALSE	canonical	3	368	junction_4	25.2049450742974	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTAAAATGAAGTAGT	NA	False	NA	-35	True	ATTAAA	-16	NA	98399494	98383334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306
ES.9844.13	chr13	-	5234	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	41	-7	intron_retention	FALSE	canonical	3	368	junction_4	40.0938980539062	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAAGACTCCCTTG	NA	False	NA	-60	True	AATGAA	-8	NA	98399480	98383359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.14	chr13	-	3980	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	63	77	35	-77	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGAAGCAACTGATGT	NA	False	NA	-130	True	NA	NA	NA	98399486	98383429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.15	chr13	-	3913	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	27	180	-1	-180	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGTCATTTTTGTTTA	NA	False	NA	NA	False	AATGAA	-11	NA	98399522	98383532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.16	chr13	-	4219	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	34	-181	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_12	110.385026913376	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTAGTCATTTTTGTTT	NA	False	NA	NA	False	AATGAA	-10	NA	98399487	98383533	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399040
ES.9844.17	chr13	-	3435	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	-5	690	-5	-690	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCTGTCCTTATCATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	98399554	98384042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.18	chr13	-	4468	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	23	-691	intron_retention	FALSE	canonical	3	368	junction_4	40.335575831838	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTGCTGTCCTTATCATT	NA	False	NA	NA	False	ATTAAA	-16	NA	98399498	98384043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.2	chr13	-	6385	11	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	35	48	intron_retention	FALSE	canonical	3	368	junction_4	42.0248735869604	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTCCAAGTTAAATTT	NA	False	NA	-5	True	ATTAAA	-21	NA	98399486	98383304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.20	chr13	-	3714	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	28	-692	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_12	110.385026913376	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGCTGTCCTTATCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	98399493	98384044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399040
ES.9844.22	chr13	-	3040	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	43	1037	15	-1037	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGTAGGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	98399506	98384389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.23	chr13	-	4114	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	31	-1037	intron_retention	FALSE	canonical	3	368	junction_4	40.335575831838	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAACTGTAGGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	98399490	98384389	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.24	chr13	-	2882	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	12	1226	12	-1226	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTCTGCCTCATAATC	NA	False	NA	-4	True	NA	NA	NA	98399537	98384578	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.25	chr13	-	3867	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	35	-1380	intron_retention	FALSE	canonical	3	368	junction_4	40.0938980539062	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGAGGTGTTCCTGATGG	NA	False	NA	0	True	TATAAA	-22	NA	98399486	98384732	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.26	chr13	-	2734	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	5	1381	5	-1381	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGGTGTTCCTGATG	NA	False	NA	-1	True	TATAAA	-21	NA	98399544	98384733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.27	chr13	-	2362	11	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	44	-1381	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	133.105371792426	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAGGTGTTCCTGATG	NA	False	NA	-1	True	TATAAA	-21	NA	98399477	98384733	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.3	chr13	-	4083	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	28	47	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_10	121.89917851332	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATACTTCCAAGTTAAATT	NA	False	NA	-6	True	ATTAAA	-45	NA	98399493	98383305	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395770_98395881_98395975_98397306_98397479_98399382
ES.9844.32	chr13	-	2676	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	9	-1383	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	118.977238719569	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399512	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391450_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.33	chr13	-	2662	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	40	-1383	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	115.785331780652	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399481	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397472_98399382
ES.9844.34	chr13	-	5340	10	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	27	-1383	intron_retention	FALSE	canonical	3	389	junction_7	36.9758012292257	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399494	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98387139_98387292_98387427_98388436_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.35	chr13	-	3764	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	35	-1383	intron_retention	FALSE	canonical	3	368	junction_4	40.335575831838	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399486	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.36	chr13	-	4966	11	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	23	-1383	intron_retention	FALSE	canonical	3	368	junction_4	42.0248735869604	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399498	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.37	chr13	-	4615	11	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	33	-1383	intron_retention	FALSE	canonical	3	368	junction_4	42.0352233252067	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399488	98384735	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.38	chr13	-	3075	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	35	-1385	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	121.596555141263	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTCTGAGGTGTTCCT	NA	False	NA	-5	True	TATAAA	-17	NA	98399486	98384737	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390640_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.39	chr13	-	2510	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	37	1573	9	-1573	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGGCAAAGTGTATCA	NA	False	NA	NA	False	AGTAAA	-21	NA	98399512	98384925	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.4	chr13	-	5177	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	34	29	intron_retention	FALSE	canonical	3	368	junction_4	40.335575831838	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTAGTTTCTCAGTGGG	NA	False	NA	-24	True	ATTAAA	-27	NA	98399487	98383323	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.40	chr13	-	2296	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	63	1761	35	-1761	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGTGTGATGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	98399486	98385113	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.41	chr13	-	1999	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	28	2093	0	-2093	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCTGTTTACCCTGG	NA	False	NA	NA	False	NA	NA	NA	98399521	98385445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.42	chr13	-	3221	7	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	-3732	-2096	intron_retention	FALSE	canonical	3	368	junction_4	26.0432332862108	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGTGTCTGTTTACCC	NA	False	NA	NA	False	NA	NA	NA	98394397	98385448	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98391563_98393608_98393735_98394343
ES.9844.44	chr13	-	6412	8	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	7	-2611	intron_retention	FALSE	canonical	3	389	junction_5	41.3684292519732	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCGTAATGTACTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	98399514	98385963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98387139_98387292_98387427_98388436_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.45	chr13	-	3149	7	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	-3732	-2614	intron_retention	FALSE	canonical	3	368	junction_3	23.3452350598575	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTCGTAATGTACTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	98394397	98385966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343
ES.9844.46	chr13	-	3637	4	NIC	ENSMUSG00000041747.4	novel	2328	6	NA	NA	30	-77	intron_retention	FALSE	canonical	3	392	junction_1	53.8041716680862	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGCCTCCTATATTT	NA	False	NA	NA	False	GATAAA	-19	NA	98399491	98391295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98391563_98393608_98393735_98394343_98397479_98399382
ES.9844.5	chr13	-	8086	9	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	35	25	intron_retention	FALSE	canonical	3	375	junction_1	42.6431413008001	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAAGTAGTTTCTCAG	NA	False	NA	-28	True	ATTAAA	-23	NA	98399486	98383327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98385885_98387079_98387139_98387292_98389403_98390151_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
ES.9844.8	chr13	-	4026	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	49	20	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_12	115.244757653729	376	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAAAATGAAGTAGTTT	NA	False	NA	-33	True	ATTAAA	-18	NA	98399472	98383332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397442_98399382
ES.9844.9	chr13	-	4383	1	Genic_Genomic	ENSMUSG00000041747.4	novel	NA	NA	NA	NA	2950	20	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAAAATGAAGTAGTTT	NA	False	NA	-33	True	ATTAAA	-18	NA	98387715	98383332	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_98383300_98387700
ES.9845.1	chr13	+	2181	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-100	247	20	-247	multi-exon	TRUE	canonical	3	142	junction_1	24.7839645327212	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTGTGGCATGTAAC	NA	False	NA	NA	False	AATAAA	-32	NA	98399601	98410179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.10	chr13	+	6350	5	NIC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	-16	-7	intron_retention	FALSE	canonical	3	188	junction_1	7.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTAGCTCTGATTATAT	NA	False	NA	7	True	AATAAA	-17	NA	98399630	98410419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98403983_98404937_98405004_98407562_98408288_98408733_98408801_98409279
ES.9845.11	chr13	+	1876	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-11	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	62.5658403204177	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399635	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.12	chr13	+	4002	7	NIC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	-2	-2	intron_retention	FALSE	canonical	3	142	junction_1	23.1276650116022	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTCTTTGTAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	98399644	98411260	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98399985_98402658_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.13	chr13	+	1473	8	NNC	ENSMUSG00000021661.17	novel	1476	8	NA	NA	4	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	81.5960683326528	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTAGCTCTGATTATAT	NA	False	NA	7	True	AATAAA	-17	NA	98399650	98410419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408809_98409279_98409361_98409885
ES.9845.14	chr13	+	3155	7	NIC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	4	-7	intron_retention	FALSE	canonical	3	142	junction_1	23.1276650116022	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTAGCTCTGATTATAT	NA	False	NA	7	True	AATAAA	-17	NA	98399650	98410419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98399985_98402658_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.15	chr13	+	2084	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	66.0132562444847	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399654	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98402658_98403281_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.16	chr13	+	1461	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	9	6	-9	-6	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399655	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.17	chr13	+	2366	8	NNC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	5	-6	intron_retention	FALSE	canonical	2	11	junction_2	66.7477737915089	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399670	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.18	chr13	+	2763	1	NIC	ENSMUSG00000021661.17	novel	2217	9	NA	NA	2720	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98407657	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98407700_98410400
ES.9845.2	chr13	+	2420	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-93	1	27	-1	multi-exon	FALSE	canonical	3	142	junction_1	24.7839645327212	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGATTATATGCTTGT	NA	False	NA	13	True	AATAAA	-23	NA	98399608	98410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.3	chr13	+	1885	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-131	1	-28	-1	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGATTATATGCTTGT	NA	False	NA	13	True	AATAAA	-23	NA	98399618	98410425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.4	chr13	+	1857	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-27	-6	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	64.7572389775846	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399619	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98402658_98403019_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.5	chr13	+	5859	6	NIC	ENSMUSG00000021661.17	novel	2328	8	NA	NA	-27	-8	intron_retention	FALSE	canonical	3	188	junction_1	7.05974503788912	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTAGCTCTGATTATA	NA	False	NA	6	True	AATAAA	-16	NA	98399619	98410418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ES.9845.6	chr13	+	5083	5	NIC	ENSMUSG00000021661.17	novel	1949	7	NA	NA	-27	-5	intron_retention	FALSE	canonical	3	36	junction_1	71.2508771875827	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCTCTGATTATATGC	NA	False	NA	9	True	AATAAA	-19	NA	98399619	98410421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98399985_98403823_98403983_98404937_98408288_98408733_98408801_98409279
ES.9845.7	chr13	+	1558	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	-129	326	-26	-326	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCACTTGTTTATAATAA	NA	False	NA	NA	False	AATAAA	-14	NA	98399620	98410100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.8	chr13	+	2660	8	NIC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-25	-6	intron_retention	FALSE	canonical	3	142	junction_1	21.9396202969767	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399621	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_98399985_98402658_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ES.9845.9	chr13	+	2383	8	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	-17	-6	intron_retention	FALSE	canonical	2	11	junction_2	65.0393915175995	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	False	NA	8	True	AATAAA	-18	NA	98399629	98410420	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98408288_98408733_98408801_98409279_98409361_98409885
ES.9846.1	chr13	-	933	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	-45	0	-45	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453559	98446404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ES.9846.10	chr13	-	1646	5	NIC	ENSMUSG00000021660.15	novel	888	6	NA	NA	10	0	intron_retention	FALSE	canonical	3	5972	junction_1	294.857062828754	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTATCATTTTACT	NA	False	NA	-18	True	AATAAA	-35	NA	98453494	98446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ES.9846.13	chr13	-	745	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	6	-6	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_3	2553.9774940277	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTATATGGTTTATCAT	NA	False	NA	-24	True	AATAAA	-29	NA	98453469	98446411	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98446710_98447488_98447546_98449599_98449711_98450146_98450261_98452737_98452807_98453373
ES.9846.14	chr13	-	1056	7	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-13	-20	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	3099.91045121558	820	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAATTCTTTGCCTAGT	NA	False	NA	-38	True	AATAAA	-37	NA	98453488	98446425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98451694_98451910_98452737_98452807_98453373
ES.9846.16	chr13	-	638	5	NNC	ENSMUSG00000021660.15	novel	569	4	NA	NA	-14	401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2855.06220378821	806	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACAGTCTTTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	98453489	98449145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98449283_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ES.9846.2	chr13	-	1126	6	FSM	ENSMUSG00000021660.15	ENSMUST00000022163.15	1091	6	-36	1	3	0	multi-exon	FALSE	canonical	3	579	junction_5	2432.68485422999	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453511	98446404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ES.9846.3	chr13	-	6500	2	NIC	ENSMUSG00000021660.15	novel	888	6	NA	NA	4	0	intron_retention	FALSE	canonical	3	6398	junction_1	0	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453471	98446404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98452807_98453373
ES.9846.4	chr13	-	5397	4	NIC	ENSMUSG00000021660.15	novel	888	6	NA	NA	12	0	intron_retention	FALSE	canonical	3	6398	junction_3	266.948600961975	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453492	98446404	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98446710_98447488_98449802_98450146_98452807_98453373
ES.9846.6	chr13	-	2906	5	NIC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6398	junction_4	237.468945338122	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTATCATTTTACT	NA	False	NA	-18	True	AATAAA	-35	NA	98453479	98446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98446710_98447488_98449802_98450146_98450261_98452737_98452807_98453373
ES.9846.7	chr13	-	3332	5	NIC	ENSMUSG00000021660.15	novel	888	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	5972	junction_2	403.003954695236	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTATCATTTTACT	NA	False	NA	-18	True	AATAAA	-35	NA	98453482	98446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98452807_98453373
ES.9846.8	chr13	-	3700	4	FSM	ENSMUSG00000021660.15	ENSMUST00000133826.2	569	4	10	-3141	10	0	multi-exon	FALSE	canonical	3	6398	junction_3	146.166571645731	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTATCATTTTACT	NA	False	NA	-18	True	AATAAA	-35	NA	98453494	98446405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98449802_98450146_98450261_98452737_98452807_98453373
ES.9847.1	chr13	+	5322	2	NNC	ENSMUSG00000048603.9	novel	779	2	NA	NA	6	636	intron_retention	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCGTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	98453582	98459179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98458839_98459113
ES.9847.2	chr13	+	2709	4	NNC	ENSMUSG00000048603.9	novel	918	4	NA	NA	7	636	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.02768199119819	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCGTTTGGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	98453583	98459179	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98454841_98455395_98455654_98457710_98458839_98459113
ES.9847.3	chr13	+	4848	4	NNC	ENSMUSG00000048603.9	novel	918	4	NA	NA	7	2755	intron_retention	FALSE	canonical	0	0	junction_1	3.74165738677394	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTTTTGTTCACATCC	NA	False	NA	NA	False	NA	NA	NA	98453583	98463678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98453953_98455581_98455654_98457710_98460984_98462544
ES.9847.4	chr13	+	2950	5	NNC	ENSMUSG00000048603.9	novel	918	4	NA	NA	14	2816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.67423461417477	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATCTATGAGTTGATTA	NA	False	NA	NA	False	NA	NA	NA	98453590	98463739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_98454841_98455581_98455654_98457710_98457967_98460806_98460984_98462544
ES.9848.1	chr13	+	2465	1	FSM	ENSMUSG00000078302.6	ENSMUST00000105098.6	5064	1	1	2598	1	-2598	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGCTGAATTGTCCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	98490750	98493215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_98490800_98493200
ES.9849.1	chr13	-	183	1	Intergenic	novelGene_8228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTGACAG	7457	False	NA	NA	False	NA	NA	NA	98543316	98543133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_98543100_98543300
ES.985.1	chr1	+	1758	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCTTATGTTTTATAT	NA	False	NA	NA	False	TATAAA	-17	NA	88953212	88954970	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88953200_88955000
ES.9850.1	chr13	+	177	1	Intergenic	novelGene_8229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGGCTTGTGAT	6569	False	NA	NA	False	NA	NA	NA	98698882	98699059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98698900_98699100
ES.9851.1	chr13	-	211	1	Intergenic	novelGene_8230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCCATAAAACC	4898	False	NA	NA	False	NA	NA	NA	98841908	98841697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_98841700_98841900
ES.9852.1	chr13	-	716	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1181	-6	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	24.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATCCTCCTCCATCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98854199	98849587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98850076_98852942_98853093_98854121
ES.9852.2	chr13	-	719	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1165	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATCCTCCTCCATCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	98854183	98849587	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98850076_98852942_98853093_98854102
ES.9852.3	chr13	-	1618	3	NNC	ENSMUSG00000114689.2	novel	570	2	NA	NA	-1169	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	22.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACAATCCTCCTCCATC	NA	False	NA	-14	True	ATTAAA	-15	NA	98854187	98849589	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98850076_98852942_98853093_98853205
ES.9853.1	chr13	+	1603	4	Intergenic	novelGene_8231	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAGTAATAAG	NA	False	NA	NA	False	NA	NA	NA	98859065	98886771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98859182_98881377_98881563_98884708_98884793_98885553
ES.9854.1	chr13	+	180	1	Genic_Genomic	ENSMUSG00000114458.2	novel	NA	NA	NA	NA	-13	-2398	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	98937666	98937846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_98937700_98937800
ES.9855.1	chr13	+	597	1	Genic_Genomic	ENSMUSG00000114458.2	novel	NA	NA	NA	NA	2388	420	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAACAAAAATAGAA	NA	False	NA	NA	False	AAGAAA	-21	NA	98940067	98940664	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_98940100_98940700
ES.9855.2	chr13	+	296	1	Genic_Genomic	ENSMUSG00000114458.2	novel	NA	NA	NA	NA	2389	120	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATTACAACACTAG	NA	False	NA	NA	False	NA	NA	NA	98940068	98940364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_98940100_98940400
ES.9856.1	chr13	+	157	1	Intergenic	novelGene_8233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	98943135	98943292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98943100_98943300
ES.9857.1	chr13	+	3731	1	Intergenic	novelGene_8234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	98944799	98948530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98944800_98948500
ES.9857.2	chr13	+	5033	1	Intergenic	novelGene_8235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGGGCTAATAGAAATGA	NA	False	NA	NA	False	NA	NA	NA	98944800	98949833	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98944800_98949800
ES.9857.3	chr13	+	1139	1	Intergenic	novelGene_8236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	98944803	98945942	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98944800_98945900
ES.9858.1	chr13	-	8046	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-14	6	intron_retention	TRUE	non_canonical	0	0	junction_10	83.0996850532818	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGCCTTTGTGTCCCTT	NA	False	NA	2	True	AATAAA	-28	NA	98951730	98859904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98887511_98887916_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.10	chr13	-	4930	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	65.209274857264	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTGCCTTTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	98951771	98859910	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98891556_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.12	chr13	-	4438	22	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.8878734580305	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGACTTTGTGCCTTTGT	NA	False	NA	-5	True	AATAAA	-21	NA	98951682	98859911	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98932800_98932876_98942813_98942906_98951583
ES.9858.14	chr13	-	4827	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	96.7220209589021	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGACTTTGTGCCTTTG	NA	False	NA	-6	True	AATAAA	-20	NA	98951665	98859912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98891556_98891755_98892065_98892134_98899335_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.15	chr13	-	5081	9	NIC	ENSMUSG00000041685.17	novel	2764	10	NA	NA	-16	-2	intron_retention	FALSE	canonical	3	213	junction_8	17.585505395069	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGACTTTGTGCCTTTG	5205	False	NA	-6	True	AATAAA	-20	NA	98885844	98859912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98862285_98862568_98862734_98866696_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723
ES.9858.16	chr13	-	8459	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-40	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	84.9605766622194	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98951756	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98888440_98891583_98891761_98892072_98892124_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.17	chr13	-	8062	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	3	-3	intron_retention	FALSE	non_canonical	0	0	junction_2	105.538426058948	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98951687	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98865597_98865665_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98887514_98887918_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.18	chr13	-	8428	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	1	-3	intron_retention	FALSE	non_canonical	0	0	junction_10	66.2742237017736	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98951715	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.2	chr13	-	5286	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-167	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.0389963659297	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCCTTTGTGTCCCT	NA	False	NA	1	True	AATAAA	-27	NA	98952124	98859905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.21	chr13	-	3986	19	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-27143	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	80.8467724605253	418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98913952	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867344_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896
ES.9858.22	chr13	-	4908	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	61	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	77.4471220302927	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98951896	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98932800_98932876_98942813_98942906_98951583
ES.9858.23	chr13	-	5088	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	95	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	94.6289537556497	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGACTTTGTGCCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	98951862	98859913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886109_98886225_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.25	chr13	-	4843	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	6	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.0389963659297	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951684	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891577_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.27	chr13	-	4890	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	83.2708928011565	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951739	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892157_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.28	chr13	-	4597	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-23	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	80.2235126597625	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951739	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98932800_98932876_98942813_98942906_98951583
ES.9858.3	chr13	-	5022	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	8747	5	intron_retention	FALSE	non_canonical	2	9	junction_21	61.7506315422585	424	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCCTTTGTGTCCCT	NA	False	NA	1	True	AATAAA	-27	NA	98942914	98859905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98932800_98932876_98942813
ES.9858.30	chr13	-	5042	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	92.9245371255623	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951706	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886029_98886213_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.32	chr13	-	4626	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	83.2935456371111	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951673	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.34	chr13	-	4882	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-18	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	85.0873275275768	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951734	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98891561_98891761_98892072_98892157_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.35	chr13	-	4814	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	65.209274857264	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951673	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98891570_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.36	chr13	-	7727	13	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-7679	-4	intron_retention	FALSE	non_canonical	0	0	junction_11	90.9178505880752	412	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98894488	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880044_98882308_98882413_98884723_98886403_98888414_98888440_98891583_98891761_98892072
ES.9858.39	chr13	-	4675	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	27	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.4950151849793	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951634	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869137_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.40	chr13	-	4904	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	81.4950151849793	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	False	NA	-8	True	AATAAA	-18	NA	98951759	98859914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869033_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.42	chr13	-	4885	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-30	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	103.222610761406	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951746	98859915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892157_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932865_98942809_98942906_98951587
ES.9858.43	chr13	-	4888	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-23	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	81.4519179059373	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951739	98859915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891755_98892069_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.45	chr13	-	4779	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	82.4027409752057	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951732	98859915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.46	chr13	-	4891	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	2	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	91.6950074976822	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951659	98859915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98927629_98927710_98932800_98932876_98942813_98942906_98951583
ES.9858.47	chr13	-	4932	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-1	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	98.8692388966356	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-17	NA	98951703	98859915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882386_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98933428_98933533_98942813_98942906_98951583
ES.9858.5	chr13	-	4824	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-22	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	77.3251793715302	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTGCCTTTGTGTCCC	NA	False	NA	0	True	AATAAA	-26	NA	98951738	98859906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98942813_98942906_98951583
ES.9858.50	chr13	-	6409	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	4	-8	intron_retention	FALSE	non_canonical	0	0	junction_11	83.0771613910918	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGCAATTGACTTTGTG	NA	False	NA	-12	True	AATAAA	-14	NA	98951712	98859918	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98886403_98888414_98888440_98891583_98891762_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.52	chr13	-	4779	23	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-12	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	66.2742237017736	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGCAATTGACTTTGT	NA	False	NA	-13	True	AATAAA	-13	NA	98951677	98859919	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98891561_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.53	chr13	-	8442	24	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-16	-10	intron_retention	FALSE	non_canonical	0	0	junction_10	66.1589996335659	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGCAATTGACTTTG	NA	False	NA	-14	True	AATAAA	-12	NA	98951732	98859920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98887511_98887916_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.56	chr13	-	3503	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-42	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.0389963659297	414	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCATTTCTTTAGT	NA	False	NA	NA	False	ACTAAA	-21	NA	98951758	98861322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.57	chr13	-	3597	26	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-40	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	87.0819751728221	414	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCATTTCTTTAGT	NA	False	NA	NA	False	ACTAAA	-21	NA	98951756	98861322	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98933428_98933525_98942813_98942906_98951583
ES.9858.59	chr13	-	4867	11	NNC	ENSMUSG00000041685.17	novel	2764	10	NA	NA	-1164	1	intron_retention	FALSE	non_canonical	0	0	junction_10	73.6353176132214	384	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCCTGTCTCATTTCT	3076	False	NA	NA	False	ACTAAA	-16	NA	98887973	98861327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98887514_98887918
ES.9858.60	chr13	-	3226	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	5	-168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	81.4519179059373	413	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTAGTTTGTGTTAAT	NA	False	NA	NA	False	TTTAAA	-25	NA	98951656	98861496	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891758_98892070_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.62	chr13	-	3305	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	33	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.0389963659297	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGATTCTCAAGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	98951924	98861686	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.63	chr13	-	3180	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-24	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	94.4236537573551	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGAGATTCTCAAGTG	NA	False	NA	NA	False	AATAAA	-22	NA	98951740	98861687	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886109_98886213_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.65	chr13	-	2805	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-28	-316	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	64.0389963659297	404	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCAGTGTCTGTGTTCT	NA	False	NA	NA	False	ACTAAA	-13	NA	98951744	98862006	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.66	chr13	-	1731	16	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	6	-2353	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.0130790861024	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGGAATTCTGATTA	NA	False	NA	NA	False	AATAAA	-19	NA	98951684	98884394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.67	chr13	-	1452	16	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-4	-2642	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	79.0130790861024	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGATGTCTTATTTTTGG	NA	False	NA	NA	False	AATAAA	-13	NA	98951694	98884683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.68	chr13	-	3231	15	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-15	1146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	115.122738405404	357	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAATAAAAAATC	NA	False	NA	NA	False	TATAAA	-4	NA	98951731	98886596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98933428_98933525_98942813_98942906_98951583
ES.9858.69	chr13	-	2721	15	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-6	1146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.592690687048	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAATAAAAAATC	NA	False	NA	NA	False	TATAAA	-4	NA	98951722	98886596	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98887514_98887918_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.7	chr13	-	6443	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	12	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	81.4902431105849	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTGTGCCTTTGTGT	NA	False	NA	-3	True	AATAAA	-23	NA	98951678	98859909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98887514_98887918_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.70	chr13	-	1548	15	NNC	ENSMUSG00000041685.17	novel	1586	15	NA	NA	-42	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	105.592690687048	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAGTCTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	98951758	98887337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98887527_98888399_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.71	chr13	-	1497	14	NNC	ENSMUSG00000041685.17	novel	944	9	NA	NA	-2	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.492620940292	357	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTAGTCTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	98951692	98887337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98887582_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.72	chr13	-	2213	14	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-24	215	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.492620940292	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGTCTTCAGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	98951740	98887527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.73	chr13	-	2008	14	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-21	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	83.492620940292	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTAGTCTTCAGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	98951737	98887729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.74	chr13	-	1999	13	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	114.021288217011	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	98951739	98887742	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98888440_98891583_98891761_98892072_98892157_98900193_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.75	chr13	-	3080	14	NNC	ENSMUSG00000041685.17	novel	2964	14	NA	NA	1	117	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_1	81.2963750219896	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTGTTTCATTTAGA	NA	False	NA	NA	False	AATAAA	-14	NA	98951689	98888771	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98890606_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.76	chr13	-	1367	14	NNC	ENSMUSG00000041685.17	novel	1927	15	NA	NA	-15	116	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	84.3795314365029	350	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTTGTTTCATTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	98951731	98888772	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98888854_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921285_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.77	chr13	-	3014	14	NNC	ENSMUSG00000041685.17	novel	2964	14	NA	NA	-23	1	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_1	81.2963750219896	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTCTCTTTCTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98951739	98888887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98890606_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.78	chr13	-	2643	14	NNC	ENSMUSG00000041685.17	novel	2964	14	NA	NA	-3	-324	at_least_one_novel_splicesite	FALSE	non_canonical	3	9	junction_1	81.2963750219896	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAGGGATGGATATATA	NA	False	NA	NA	False	ATTAAA	-19	NA	98951693	98889212	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98890606_98891587_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.79	chr13	-	317	1	Intergenic	novelGene_8232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAACAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	98898171	98897854	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_98897900_98898200
ES.9858.80	chr13	-	1380	11	ISM	ENSMUSG00000041685.17	ENSMUST00000109403.2	1523	14	186	8706	-55	1956	5prime_fragment	FALSE	canonical	3	252	junction_1	32.5416655996585	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCTTAAAATTGGCCAAC	NA	False	NA	NA	False	GATAAA	-37	NA	98951771	98899053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.81	chr13	-	1539	10	NIC	ENSMUSG00000041685.17	novel	1523	14	NA	NA	-112	1892	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	91.015261235563	341	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGAGTGGCACCATG	NA	False	NA	NA	False	AATAAA	-14	NA	98952069	98899117	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98942813_98942906_98951583
ES.9858.82	chr13	-	1303	8	ISM	ENSMUSG00000041685.17	ENSMUST00000225840.2	944	9	-6	10918	-6	427	5prime_fragment	FALSE	canonical	3	257	junction_3	32.1190387941673	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGAGTCAAGCTTAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	98951722	98911927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ES.9858.83	chr13	-	1619	5	NNC	ENSMUSG00000041685.17	novel	407	2	NA	NA	-22	-9442	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	158.509266290649	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98951738	98921796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98922874_98925870_98926024_98926239_98926382_98942813_98942906_98951583
ES.9858.9	chr13	-	4745	25	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	-24	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	90.7084386004595	425	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTTTGTGCCTTTGTGT	NA	False	NA	-3	True	AATAAA	-23	NA	98951740	98859909	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891583_98891761_98892072_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98925943_98926281_98926382_98932800_98932876_98942813_98942906_98951613
ES.9859.1	chr13	+	160	1	Intergenic	novelGene_8237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATATATATTT	NA	False	NA	NA	False	NA	NA	NA	98953979	98954139	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98954000_98954100
ES.986.1	chr1	-	177	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTGGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	88955868	88955691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_88955700_88955900
ES.9860.1	chr13	+	173	1	Intergenic	novelGene_8238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98964482	98964655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98964500_98964700
ES.9861.1	chr13	+	135	1	Intergenic	novelGene_8239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98965519	98965654	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_98965500_98965700
ES.9862.1	chr13	+	234	1	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACAACAG	NA	False	NA	NA	False	AGTAAA	-37	NA	98975837	98976071	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_98975800_98976100
ES.9862.2	chr13	+	7507	1	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACAGAAACCTATCTAA	NA	False	NA	NA	False	ATTAAA	-30	NA	98975837	98983344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_98975800_98983300
ES.9862.3	chr13	+	5680	2	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-3	NA	98975837	98983317	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_98981127_98982926
ES.9862.4	chr13	+	4093	24	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCACCGCGAATTTG	2181	False	NA	NA	False	NA	NA	NA	98979850	99027529	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_98981127_98982926_98983072_98983835_98983913_98985663_98985759_98986611_98986697_98989365_98989457_98989905_98990007_98991650_98991741_98991821_98992087_98993396_98993483_98994892_98995066_98996270_98996495_98997146_98997301_99000214_99000387_99000937_99000995_99001474_99001598_99003555_99003679_99006749_99006828_99012109_99012243_99015124_99015232_99021019_99021173_99024973_99025050_99027184_99027299_99027434
ES.9863.1	chr13	+	128	1	Intergenic	novelGene_8240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	99030924	99031052	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99030900_99031100
ES.9864.1	chr13	+	3587	1	Intergenic	novelGene_8242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAACTCCCAAAACCA	NA	False	NA	NA	False	NA	NA	NA	99042327	99045914	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99042300_99045900
ES.9865.1	chr13	+	128	1	Intergenic	novelGene_8243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	99060344	99060472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99060300_99060500
ES.9866.1	chr13	-	8945	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	42	-534	12	534	multi-exon	TRUE	canonical	3	248	junction_23	63.8650810868555	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGCAGTGGATTTTTT	NA	False	NA	NA	False	ATTAAA	-42	NA	99062850	98974992	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.11	chr13	-	8304	23	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	20	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	117.342016176349	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062842	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.12	chr13	-	8278	5	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	38575	0	17858	0	3prime_fragment	FALSE	canonical	3	465	junction_2	23.9739441894737	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	98988973	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615
ES.9866.13	chr13	-	5169	2	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	25829	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	3601	False	NA	-8	True	AATAAA	-14	NA	98981002	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98980559_98980864
ES.9866.14	chr13	-	8197	22	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	123.765871425467	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027508	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.15	chr13	-	7177	13	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	9530	-1	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	134.294038917924	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	98997301	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989453_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148
ES.9866.16	chr13	-	8322	23	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	-1	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	119.39388940162	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027537	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.17	chr13	-	8429	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_18	141.24487042562	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027536	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006823_99012107_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ES.9866.18	chr13	-	8238	25	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	116.715079240954	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027536	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98976357_98976538_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.2	chr13	-	5343	1	Genic_Genomic	ENSMUSG00000009470.18	novel	NA	NA	NA	NA	26079	117	mono-exon	FALSE	NA	NA	NA	NA	NA	859	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTTATTTGTTTTGA	3851	False	NA	NA	False	ATTAAA	-12	NA	98980752	98975409	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_98975400_98980800
ES.9866.20	chr13	-	8403	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	-1	combination_of_known_junctions	TRUE	canonical	3	32	junction_23	102.017993890807	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTGCACTCTTGATTT	NA	False	NA	-8	True	AATAAA	-14	NA	99027536	98975527	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
ES.9866.24	chr13	-	8284	23	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	142.161392685384	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	NA	False	NA	-9	True	AATAAA	-13	NA	99027514	98975528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
ES.9866.25	chr13	-	8313	23	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	118.594149577665	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	NA	False	NA	-9	True	AATAAA	-13	NA	99062850	98975528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.26	chr13	-	6779	1	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	24524	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	2296	False	NA	-9	True	AATAAA	-13	NA	98982307	98975528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98975500_98982300
ES.9866.27	chr13	-	8433	25	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	39	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	146.980434969723	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGCACTCTTGATT	NA	False	NA	-9	True	AATAAA	-13	NA	99062823	98975528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98990520_98990572_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.29	chr13	-	8374	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	139.229706431922	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAGACGTTGCACTCTT	NA	False	NA	-13	True	AATAAA	-9	NA	99027506	98975532	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025056_99027184_99027299_99027451
ES.9866.3	chr13	-	8448	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-9	6	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTTGATTTTTAATGG	NA	False	NA	-1	True	AATAAA	-21	NA	99027557	98975520	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.30	chr13	-	7014	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-269	1708	-269	-1708	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGTTGAGTTTGGTC	NA	False	NA	NA	False	AATAAA	-36	NA	99063161	98977234	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.31	chr13	-	4656	16	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	26032	2798	5315	-2798	3prime_fragment	FALSE	canonical	3	423	junction_13	40.5939240116876	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTCTTGTGGTGCAGTC	NA	False	NA	NA	False	NA	NA	NA	99001516	98978324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476
ES.9866.32	chr13	-	4942	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	23	-3458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	116.967657462435	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCTCTCTCCTATT	NA	False	NA	NA	False	AATAAA	-14	NA	99062839	98978984	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989453_98989901_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.33	chr13	-	4389	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	4007	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTCCCATGTGTAT	NA	False	NA	0	True	AATAAA	-22	NA	99027536	98979558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.34	chr13	-	4394	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-16	4001	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	102.017993890807	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCTCTTCCTCCCAT	NA	False	NA	-6	True	AATAAA	-16	NA	99027564	98979564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
ES.9866.35	chr13	-	4704	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-289	4038	-289	4001	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGCTCTTCCTCCCAT	NA	False	NA	-6	True	AATAAA	-16	NA	99063181	98979564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.36	chr13	-	6970	23	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	82	3997	intron_retention	FALSE	canonical	3	248	junction_22	65.0277277159584	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCCTTTGCTCTTCCTC	NA	False	NA	-10	True	AATAAA	-12	NA	99062780	98979568	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.37	chr13	-	4191	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-295	4557	-295	3482	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTGATATTGTATT	NA	False	NA	NA	False	NA	NA	NA	99063187	98980083	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.38	chr13	-	3716	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	40	4689	-2	3350	multi-exon	FALSE	canonical	3	24	junction_23	103.521017838	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTCAATATAGCCCTG	NA	False	NA	NA	False	NA	NA	NA	99027508	98980215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ES.9866.39	chr13	-	3917	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-341	4877	-341	3162	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTACTTCTTAGATTT	NA	False	NA	1	True	ATTAAA	-22	NA	99063233	98980403	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.4	chr13	-	8752	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-299	0	-299	0	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99063191	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.40	chr13	-	3559	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-5	3160	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTACTTCTTAGAT	NA	False	NA	-1	True	ATTAAA	-20	NA	99027553	98980405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.41	chr13	-	3442	23	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	3159	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	119.39388940162	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTGTACTTCTTAGA	NA	False	NA	-2	True	ATTAAA	-19	NA	99027536	98980406	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.43	chr13	-	3578	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	-13	3157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	117.236596930034	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTTGTACTTCTTA	NA	False	NA	-4	True	ATTAAA	-17	NA	99062875	98980408	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983096_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.44	chr13	-	3454	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-6517	3155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	144.427178293657	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATGGTTGTACTTCT	NA	False	NA	-6	True	ATTAAA	-15	NA	99069409	98980410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993448_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99069354
ES.9866.45	chr13	-	6208	23	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	3155	intron_retention	FALSE	canonical	3	224	junction_22	68.9976194343204	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATGGTTGTACTTCT	NA	False	NA	-6	True	ATTAAA	-15	NA	99027536	98980410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.47	chr13	-	3532	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	17	3155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	118.77851861314	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATGGTTGTACTTCT	NA	False	NA	-6	True	ATTAAA	-15	NA	99027489	98980410	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986734_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.49	chr13	-	3553	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	11	3153	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	117.080667907779	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTCATGGTTGTACTT	NA	False	NA	-8	True	ATTAAA	-13	NA	99062851	98980412	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993511_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.5	chr13	-	8425	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_23	108.052444733354	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062851	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027312_99062758
ES.9866.50	chr13	-	3317	22	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	24	3152	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	121.720563963572	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTTCATGGTTGTACT	NA	False	NA	-9	True	ATTAAA	-12	NA	99062838	98980413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.51	chr13	-	3501	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	39	3150	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	116.162408308238	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATAATTTCATGGTTGTA	NA	False	NA	-11	True	ATTAAA	-10	NA	99062823	98980415	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025056_99027184_99027299_99062758
ES.9866.52	chr13	-	3447	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-16	3037	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCCGACGCGCCACTC	NA	False	NA	-1	True	AATAAA	-33	NA	99027564	98980528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.53	chr13	-	3446	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	-11	5010	-11	3029	multi-exon	FALSE	canonical	3	24	junction_23	103.521017838	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGTGACATGCCGACG	NA	False	NA	-9	True	AATAAA	-25	NA	99027559	98980536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ES.9866.54	chr13	-	3394	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3028	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	102.017993890807	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGTGACATGCCGAC	NA	False	NA	-10	True	AATAAA	-24	NA	99027537	98980537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
ES.9866.55	chr13	-	3754	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	-312	5011	-312	3028	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGTGACATGCCGAC	NA	False	NA	-10	True	AATAAA	-24	NA	99063204	98980537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.57	chr13	-	3458	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	-6	3026	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	116.80301870921	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	99062868	98980539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986734_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.58	chr13	-	3376	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	-6532	3026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	108.052444733354	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	99069424	98980539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99069354
ES.9866.59	chr13	-	1097	7	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	16906	3026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	185.62125417096	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	98989925	98980539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989453_98989901
ES.9866.6	chr13	-	8428	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_22	116.162408308238	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062861	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025056_99027184_99027299_99062758
ES.9866.60	chr13	-	3367	24	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	789	3026	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	108.052444733354	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	99062073	98980539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062012
ES.9866.62	chr13	-	3477	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	-11	3025	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	117.080667907779	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCCTGTGACATGCC	NA	False	NA	-13	True	AATAAA	-21	NA	99062903	98980540	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993511_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.64	chr13	-	3432	25	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	24	3021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	146.980434969723	613	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGAAGCACCCTGTGACA	NA	False	NA	-17	True	AATAAA	-17	NA	99062838	98980544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98990520_98990572_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.65	chr13	-	6074	23	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	3021	intron_retention	FALSE	canonical	3	224	junction_22	68.9976194343204	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGAAGCACCCTGTGACA	NA	False	NA	-17	True	AATAAA	-17	NA	99027536	98980544	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.66	chr13	-	3856	25	NNC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	4352	3019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_23	141.57043300068	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGAAGCACCCTGTGA	NA	False	NA	-19	True	AATAAA	-15	NA	99058510	98980546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99056250_99056644_99058346
ES.9866.68	chr13	-	3217	22	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	-9	3019	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	121.720563963572	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGAAGCACCCTGTGA	NA	False	NA	-19	True	AATAAA	-15	NA	99062871	98980546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.69	chr13	-	3193	23	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	12	3018	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	119.56910412459	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACGAAGCACCCTGTG	NA	False	NA	-20	True	AATAAA	-14	NA	99062850	98980547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992097_98995013_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.7	chr13	-	8436	24	NNC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_21	116.191273761409	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062862	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021186_99024973_99025050_99027184_99027299_99062758
ES.9866.70	chr13	-	3836	22	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	11	3018	intron_retention	FALSE	canonical	2	12	junction_6	141.464609806355	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACGAAGCACCCTGTG	NA	False	NA	-20	True	AATAAA	-14	NA	99027537	98980547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
ES.9866.72	chr13	-	3089	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	3	5361	3	2678	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCGTCTACTCACAGA	NA	False	NA	4	True	NA	NA	NA	99062889	98980887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.73	chr13	-	3055	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	12	2673	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCCGTCTACTC	NA	False	NA	-1	True	NA	NA	NA	99027536	98980892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.74	chr13	-	3420	19	ISM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	68	12805	38	-2601	5prime_fragment	FALSE	canonical	3	248	junction_18	70.7613141500842	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTGAAGTTTCTTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	99062824	98988331	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9866.75	chr13	-	2683	19	ISM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	-30	3374	12	-3374	5prime_fragment	FALSE	canonical	3	224	junction_18	75.1702799492879	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCAATTGTTGAGTCAA	NA	False	NA	NA	False	AGTAAA	-14	NA	99027536	98989104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.76	chr13	-	1385	12	NNC	ENSMUSG00000009470.18	novel	2503	21	NA	NA	12	7240	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_11	151.767383989364	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCCAGCTTGAATTACAA	NA	False	NA	NA	False	NA	NA	NA	99027536	98997146	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027441
ES.9866.77	chr13	-	2967	1	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	5960	6482	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATCAACTCTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	99000871	98997904	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98997900_99000900
ES.9866.78	chr13	-	2950	5	ISM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	-30	26996	12	-577	5prime_fragment	FALSE	canonical	3	224	junction_4	127.234036326763	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTACAGTGGTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	99027536	99012726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.79	chr13	-	2959	5	ISM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	12	37203	12	-580	5prime_fragment	FALSE	canonical	3	24	junction_4	211.396546802449	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGGTTACAGTGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	99027536	99012729	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ES.9866.8	chr13	-	8434	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	11	0	11	0	multi-exon	FALSE	canonical	3	24	junction_23	103.521017838	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99027537	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ES.9866.80	chr13	-	1097	5	ISM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	-8	28827	8	-2408	5prime_fragment	FALSE	canonical	3	224	junction_4	127.234036326763	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATACAGTAATTCTGAT	NA	False	NA	NA	False	NA	NA	NA	99027514	99014557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ES.9866.81	chr13	-	1733	1	Intergenic	novelGene_8241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACTATGAAAGTCTGT	NA	False	NA	NA	False	AAAAAG	-4	NA	99036506	99034773	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99034800_99036500
ES.9866.82	chr13	-	3210	3	Antisense	novelGene_ENSMUSG00000062461.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTCTAGTGCTTTTTT	NA	False	NA	NA	False	TATAAA	-11	NA	99044608	99040636	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_99040689_99041239_99043284_99043494
ES.9866.9	chr13	-	8288	23	NIC	ENSMUSG00000009470.18	novel	8453	24	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	118.970654066142	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062850	98975526	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ES.9867.1	chr13	+	2036	4	NNC	ENSMUSG00000114203.2	novel	960	2	NA	NA	-16482	5070	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGGATCCTGTGTGCC	NA	False	NA	NA	False	NA	NA	NA	99114176	99138996	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99114293_99133089_99133355_99136611_99136666_99137395
ES.9867.2	chr13	+	2760	1	Intergenic	novelGene_8244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99114176	99116936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99114200_99116900
ES.9867.3	chr13	+	3383	2	Antisense	novelGene_ENSMUSG00000045022.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTGTTCGTGATT	NA	False	NA	NA	False	NA	NA	NA	99119144	99140416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_99121535_99139423
ES.9868.1	chr13	+	219	1	Intergenic	novelGene_8245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAATTGGTGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	99149880	99150099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99149900_99150100
ES.9869.1	chr13	-	2476	1	Intergenic	novelGene_8246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTACTAGCCTGGCAGT	NA	False	NA	NA	False	TATAAA	-39	NA	99166022	99163546	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99163500_99166000
ES.987.1	chr1	+	241	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGAGATAGCAGAATG	NA	False	NA	NA	False	NA	NA	NA	88974502	88974743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_88974500_88974700
ES.9870.1	chr13	-	216	1	Intergenic	novelGene_8247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCCAAAGACGCCT	NA	False	NA	NA	False	NA	NA	NA	99176830	99176614	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99176600_99176800
ES.9871.1	chr13	+	4744	4	Antisense	novelGene_ENSMUSG00000100410.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGGGATTCTTTGAA	7375	False	NA	NA	False	AATAAA	-13	NA	99192119	99214122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_99192261_99209286_99209449_99209563_99209714_99209831
ES.9872.1	chr13	+	1909	3	FSM	ENSMUSG00000097848.3	ENSMUST00000224929.2	408	3	-93	-1408	-38	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACGACTGGTCTTTAGC	6902	False	NA	NA	False	NA	NA	NA	99237175	99244088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_99237334_99239172_99239321_99242485
ES.9872.2	chr13	+	7922	1	Genic_Genomic	ENSMUSG00000097848.3	novel	NA	NA	NA	NA	0	1047	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAATAATCAGAAGAGCA	6940	False	NA	NA	False	NA	NA	NA	99237213	99245135	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_99237200_99245100
ES.9872.3	chr13	+	3978	1	NIC	ENSMUSG00000097848.3	novel	1723	2	NA	NA	2842	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACGACTGGTCTTTAGC	9837	False	NA	NA	False	NA	NA	NA	99240110	99244088	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_99240100_99244100
ES.9873.1	chr13	+	132	1	Intergenic	novelGene_8248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAAGGCGTTCCGTTCTGT	9294	False	NA	NA	False	NA	NA	NA	99257314	99257446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99257300_99257400
ES.9874.1	chr13	-	2868	9	NIC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	4	1	intron_retention	FALSE	canonical	3	306	junction_4	30.2961940679023	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGTTGTGTTTCTTTTCT	NA	False	NA	-10	True	AATAAA	-17	NA	99481209	99456153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.12	chr13	-	7564	1	NIC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	3442	-14053	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCGTTTTAGCAGACTTT	NA	False	NA	NA	False	AATAAA	-22	NA	99477771	99470207	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_99470200_99477800
ES.9874.2	chr13	-	1697	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	8	-1	8	1	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGTTGTGTTTCTTTTCT	NA	False	NA	-10	True	AATAAA	-17	NA	99481205	99456153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.4	chr13	-	4933	9	NIC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	8	-2	intron_retention	FALSE	canonical	3	306	junction_4	27.7758888246623	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGTTGTGTTTCTTT	NA	False	NA	-13	True	AATAAA	-14	NA	99481205	99456156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_99456902_99458068_99458183_99463145_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.5	chr13	-	6294	11	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	29	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	147.292260489138	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	False	NA	-14	True	AATAAA	-13	NA	99481184	99456157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99456902_99458068_99459212_99459402_99462732_99462881_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.6	chr13	-	1803	11	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	36	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	142.857971426169	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	False	NA	-14	True	AATAAA	-13	NA	99481177	99456157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99456902_99457309_99457448_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.7	chr13	-	1726	10	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	26	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.930178596745	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	False	NA	-14	True	AATAAA	-13	NA	99481187	99456157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99456902_99458068_99458234_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.8	chr13	-	1728	11	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	24	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	142.459678505885	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	False	NA	-14	True	AATAAA	-13	NA	99481189	99456157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99456902_99457309_99457361_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ES.9874.9	chr13	-	1664	10	NNC	ENSMUSG00000021650.8	novel	1704	10	NA	NA	24	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	115.424605289223	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACTCGGGTTGTGTTTC	NA	False	NA	-16	True	AATAAA	-11	NA	99481189	99456159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473278_99476408_99476539_99479820_99479914_99481071
ES.9875.1	chr13	+	1926	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	-63	-14	-63	14	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTGGCATTCCTTG	NA	False	NA	34	True	AATAAA	-29	NA	99481230	99552084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.10	chr13	+	4108	5	NNC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	61349	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	182.988216833762	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTTGTGTGGTGTGA	NA	False	NA	17	True	AATAAA	-12	NA	99543400	99552067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99544905_99544950_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.2	chr13	+	1976	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481289	99552070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.3	chr13	+	1734	10	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	-1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	150.030367296461	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGTGTGGTGTGATT	NA	False	NA	19	True	AATAAA	-14	NA	99481292	99552069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.4	chr13	+	1933	12	NNC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	6	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	177.062019297437	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTGTGTGGTGTGATT	NA	False	NA	19	True	AATAAA	-14	NA	99481301	99552069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99481384_99484839_99484918_99492392_99492486_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.5	chr13	+	1966	12	NNC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	179.814183244448	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481301	99552070	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547543_99547669_99547785_99547929_99548702_99548874_99551246
ES.9875.7	chr13	+	1918	12	NNC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	180.021853586155	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTTGTGTGGTGTGA	NA	False	NA	17	True	AATAAA	-12	NA	99481302	99552067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99538854_99538936_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.8	chr13	+	1829	11	NNC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	8	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	139.487060331774	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTTGTGTGGTGTGA	NA	False	NA	17	True	AATAAA	-12	NA	99481303	99552067	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_99481384_99484839_99484918_99499479_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ES.9875.9	chr13	+	5986	3	Intergenic	novelGene_8251	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCTGGATTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	99524649	99530912	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99525364_99525589_99527701_99527751
ES.9876.1	chr13	-	176	1	Intergenic	novelGene_8249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAACACTAGCA	NA	False	NA	NA	False	NA	NA	NA	99493245	99493069	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99493100_99493200
ES.9877.1	chr13	-	5228	1	Intergenic	novelGene_8250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTTCATAGAGACC	5193	False	NA	NA	False	NA	NA	NA	99511478	99506250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99506200_99511500
ES.9878.1	chr13	+	3402	1	Antisense	novelGene_ENSMUSG00000052727.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTACATGTGTTCCC	6605	False	NA	NA	False	NA	NA	NA	99557547	99560949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_99557500_99560900
ES.9879.1	chr13	+	2637	1	Intergenic	novelGene_8253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5502	False	NA	NA	False	NA	NA	NA	99647489	99650126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99647500_99650100
ES.988.1	chr1	+	4057	7	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	-95	-1259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.810025441418	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCTTTTCAAATTATG	NA	False	NA	38	True	AGTAAA	-32	NA	88998041	89081531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88998320_89034979_89035059_89065280_89065526_89069521_89069748_89071271_89073629_89079921_89080111_89080848
ES.988.10	chr1	+	4668	5	NIC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	41	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	51.4119392748416	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATTTGGACATTTC	NA	False	NA	9	True	ATTAAA	-19	NA	88998215	89082787	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_88998320_89034979_89035059_89071271_89073629_89079921_89080111_89080848
ES.988.11	chr1	+	3830	6	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	223	-1269	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	46.0113029591643	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTTTAAAGGCCTTT	NA	False	NA	28	True	AGTAAA	-22	NA	88998397	89081521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88998685_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.12	chr1	+	4866	6	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	8605	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	47.1677856168805	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	False	NA	12	True	ATTAAA	-22	NA	89006779	89082790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89006834_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.13	chr1	+	3841	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	60935	-1260	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	49.7462310130124	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCCTTTTCAAATTAT	NA	False	NA	37	True	AGTAAA	-31	NA	89059109	89081530	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89059478_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.14	chr1	+	5107	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	60948	19	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	49.7462310130124	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTAGCGTGTGTGTGTG	NA	False	NA	31	True	ATTAAA	-41	NA	89059122	89082809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89059478_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.15	chr1	+	3601	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	61478	-1268	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4119392748416	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTTAAAGGCCTTTT	NA	False	NA	29	True	AGTAAA	-23	NA	89059652	89081522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89059789_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.16	chr1	+	3862	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	61582	-1275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.4119392748416	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATGTTCTTTAAAG	NA	False	NA	22	True	AGTAAA	-16	NA	89059756	89081515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89060161_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.17	chr1	+	3806	6	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	62689	-1278	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	55.0694107468021	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTTATGTTCTTTA	NA	False	NA	19	True	AGTAAA	-13	NA	89060863	89081512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89060967_89061439_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.18	chr1	+	4179	6	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	62920	-1262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.367586667037	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGGCCTTTTCAAATT	NA	False	NA	35	True	AGTAAA	-29	NA	89061094	89081528	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89061688_89063215_89063331_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.19	chr1	+	3907	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63083	-1256	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTTTCAAATTATGTTC	NA	False	NA	41	True	AGTAAA	-35	NA	89061257	89081534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.2	chr1	+	3826	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-73	1242	-73	-1242	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCCAGGGGTATGTAGA	NA	False	NA	55	True	TTTAAA	-15	NA	88998063	89081548	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.20	chr1	+	5177	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63088	19	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTAGCGTGTGTGTGTG	NA	False	NA	31	True	ATTAAA	-41	NA	89061262	89082809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.21	chr1	+	3658	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63211	-1377	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	206	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACTTAGAAAGGACGTA	NA	False	NA	-80	True	TTTAAA	-23	NA	89061385	89081413	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.22	chr1	+	3516	1	NIC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	65945	-15155	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89064119	89067635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89064100_89067600
ES.988.23	chr1	+	1961	1	Genic_Genomic	ENSMUSG00000036206.13	novel	NA	NA	NA	NA	82672	17	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGTTAGCGTGTGTGTG	NA	False	NA	29	True	ATTAAA	-39	NA	89080846	89082807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr1_+_89080800_89082800
ES.988.3	chr1	+	5083	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	-69	-19	-69	19	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTAGCGTGTGTGTGTG	NA	False	NA	31	True	ATTAAA	-41	NA	88998067	89082809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.4	chr1	+	3844	7	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	-9	-1276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.3554641583742	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTTATGTTCTTTAAA	NA	False	NA	21	True	AGTAAA	-15	NA	88998127	89081514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88998320_89034979_89035059_89040465_89040582_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.5	chr1	+	3634	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	2	1359	2	-1359	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAGGTGGTATCTAAT	NA	False	NA	-62	True	TTTAAA	-41	NA	88998138	89081431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.6	chr1	+	5087	7	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53.3554641583742	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	False	NA	12	True	ATTAAA	-22	NA	88998160	89082790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88998320_89034979_89035059_89040465_89040582_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.7	chr1	+	5113	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	31	-149	-7	149	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACTAGGTTCCTGTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	88998167	89082939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ES.988.8	chr1	+	3811	7	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	-3	-1276	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	53.3554641583742	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTTTATGTTCTTTAAA	NA	False	NA	21	True	AGTAAA	-15	NA	88998171	89081514	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080458_89080586_89080848
ES.988.9	chr1	+	3446	5	NIC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	-3	-1269	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	51.4119392748416	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTTTAAAGGCCTTT	NA	False	NA	28	True	AGTAAA	-22	NA	88998171	89081521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_88998320_89034979_89035059_89071271_89073629_89079921_89080111_89080848
ES.9880.1	chr13	+	2762	1	NIC	ENSMUSG00000097027.3	novel	2481	2	NA	NA	58	-2312	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGACGTGTTGGAATATC	NA	False	NA	NA	False	NA	NA	NA	99653194	99655956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_99653200_99656000
ES.9881.1	chr13	-	3114	1	Genic_Genomic	ENSMUSG00000052727.7	novel	NA	NA	NA	NA	19801	416	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99560651	99557537	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_99557500_99560700
ES.9881.11	chr13	-	7928	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-251	4131	-251	-4131	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTACCCCCGTTCATCT	NA	False	NA	-2	True	AATAGA	-19	NA	99653299	99562084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ES.9881.13	chr13	-	7618	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-54	4244	-54	-4244	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCTATACTATGT	NA	False	NA	NA	False	NA	NA	NA	99653102	99562197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ES.9881.14	chr13	-	1713	2	ISM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	3077	758	-76	-758	3prime_fragment	FALSE	canonical	3	49	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTTTCTCATTGC	4614	False	NA	NA	False	AATAAA	-14	NA	99581051	99576899	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99578283_99580721
ES.9881.15	chr13	-	1528	3	NNC	ENSMUSG00000052727.7	novel	2669	3	NA	NA	2	-761	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGCATTTTCTCAT	4692	False	NA	NA	False	AATAAA	-11	NA	99580973	99576902	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99578038_99578141_99578283_99580721
ES.9881.16	chr13	-	177	1	Intergenic	novelGene_8252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGATTCAGGGG	NA	False	NA	NA	False	NA	NA	NA	99633068	99632891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_99632900_99633100
ES.9881.17	chr13	-	533	2	NNC	ENSMUSG00000052727.7	novel	11808	7	NA	NA	-47	-7774	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGCATTTGGAAATGCC	NA	False	NA	NA	False	NA	NA	NA	99653095	99651342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_99651592_99652811
ES.9881.18	chr13	-	1952	1	Genic_Genomic	ENSMUSG00000052727.7	novel	NA	NA	NA	NA	-253	-7781	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGCCTCTGCATTTGG	NA	False	NA	NA	False	NA	NA	NA	99653301	99651349	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_99651300_99653300
ES.9881.3	chr13	-	11865	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-62	5	-62	-5	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTTGGCTTCCTTGTC	NA	False	NA	-5	True	AATAAA	-35	NA	99653110	99557958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ES.9881.4	chr13	-	2782	1	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	91802	511	19206	-511	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGACTTTATGAATTCAT	NA	False	NA	NA	False	ATTAAA	-32	NA	99561246	99558464	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99558500_99561200
ES.9881.5	chr13	-	6659	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	83214	2211	10618	-2211	3prime_fragment	FALSE	canonical	3	84	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCGTCTGTAAAGCGTAT	NA	False	NA	NA	False	NA	NA	NA	99569834	99560164	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99562470_99563726_99563966_99565719
ES.9881.6	chr13	-	8794	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	72106	2813	33	-2813	3prime_fragment	FALSE	canonical	3	46	junction_3	18.280795934532	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAAGTCTGATATTGA	4723	False	NA	NA	False	NA	NA	NA	99580942	99560766	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721
ES.9881.7	chr13	-	8465	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	-28	3371	-28	-3371	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATGTGAGACAGCAA	NA	False	NA	NA	False	NA	NA	NA	99653076	99561324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ES.9881.8	chr13	-	1440	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	87098	3546	14502	-3546	3prime_fragment	FALSE	canonical	3	84	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATGCTCCCAGCATTT	NA	False	NA	NA	False	NA	NA	NA	99565950	99561499	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99562470_99563726_99563966_99565719
ES.9881.9	chr13	-	3162	3	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	85229	3693	12633	-3693	3prime_fragment	FALSE	canonical	3	84	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTTTTCACGCCTT	NA	False	NA	NA	False	AAAAAG	-21	NA	99567819	99561646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_99562470_99563726_99563966_99565719
ES.9882.1	chr13	+	214	1	Intergenic	novelGene_8254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGTACTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99967180	99967394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_99967200_99967400
ES.9883.1	chr13	+	5183	4	Antisense	novelGene_ENSMUSG00000021646.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGGGCAGATGCCG	NA	False	NA	NA	False	NA	NA	NA	100094130	100105198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100095382_100097409_100100387_100104146_100104243_100104339
ES.9883.2	chr13	+	2547	3	Antisense	novelGene_ENSMUSG00000021646.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGGGCAGATGCCG	NA	False	NA	NA	False	NA	NA	NA	100098795	100105198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100100387_100104146_100104244_100104339
ES.9884.1	chr13	+	2949	1	Intergenic	novelGene_8255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGGAAATTGTGTTAT	4698	False	NA	NA	False	NA	NA	NA	100132633	100135582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100132600_100135600
ES.9885.1	chr13	-	2904	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	1	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	81.8857578810259	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGATTATTTTCTTGG	691	False	NA	40	True	TTTAAA	-14	NA	100152125	100084994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100089507_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.11	chr13	-	1955	18	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	110.698849560949	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	671	False	NA	-6	True	AATAAA	-15	NA	100152145	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091220_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136813_100151893_100151935_100151990
ES.9885.12	chr13	-	6699	2	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	3925	0	intron_retention	FALSE	canonical	3	241	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	NA	False	NA	-6	True	AATAAA	-15	NA	100093633	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100088750_100090643
ES.9885.13	chr13	-	4930	16	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	2	0	intron_retention	FALSE	non_canonical	0	0	junction_11	85.0142471720018	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	692	False	NA	-6	True	AATAAA	-15	NA	100152124	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126756_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.14	chr13	-	2957	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	82.3691908042686	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	690	False	NA	-6	True	AATAAA	-15	NA	100152126	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100105080_100108069_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.16	chr13	-	2249	18	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	101.776129926606	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	696	False	NA	-6	True	AATAAA	-15	NA	100152120	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100138794_100138948_100151893
ES.9885.17	chr13	-	546	2	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	8795	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	NA	False	NA	-6	True	AATAAA	-15	NA	100088763	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085487_100088663
ES.9885.19	chr13	-	5086	17	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_15	104.619828874597	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	690	False	NA	-6	True	AATAAA	-15	NA	100152126	100085040	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100138794_100138948_100151893
ES.9885.2	chr13	-	2180	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	-11	-46	-11	43	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGATTATTTTCTTGG	658	False	NA	40	True	TTTAAA	-14	NA	100152158	100084994	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.20	chr13	-	2020	16	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	-9	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	105.509346610726	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGGGTTGTTGAG	681	False	NA	-7	True	AATAAA	-14	NA	100152135	100085041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126879_100127719_100127822_100136757_100136825_100151893
ES.9885.22	chr13	-	2142	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	-3	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	82.1161287065458	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGGGTTGTTGAG	687	False	NA	-7	True	AATAAA	-14	NA	100152129	100085041	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126922_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.23	chr13	-	1977	15	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	83.500580469692	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTAGGGTTGTTGA	669	False	NA	-8	True	AATAAA	-13	NA	100152147	100085042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.26	chr13	-	4815	14	NIC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	3	-2	intron_retention	FALSE	canonical	0	0	junction_4	112.992433113144	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTCTAGGGTTGTTGA	672	False	NA	-8	True	AATAAA	-13	NA	100152144	100085042	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100097407_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100151893
ES.9885.27	chr13	-	731	4	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	7	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.751990651413	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTTCACGGCTCAT	676	False	NA	-114	True	TTTAAA	-19	NA	100152140	100085148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100130058_100130160_100136757_100136825_100151893
ES.9885.28	chr13	-	4443	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	6	-108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	82.3356079940508	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTTCACGGCTCAT	720	False	NA	-114	True	TTTAAA	-19	NA	100152096	100085148	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100097836_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.29	chr13	-	1918	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	44	161	-1	-161	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGCCTGATGAGCTTT	713	False	NA	NA	False	NA	NA	NA	100152103	100085201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.30	chr13	-	1637	13	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	18	9958	-3	0	5prime_fragment	FALSE	canonical	2	186	junction_1	35.7335820886864	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAATGCCTCTGTGTGTG	687	False	NA	NA	False	AGTAAA	-8	NA	100152129	100094998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.31	chr13	-	1250	8	ISM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	1	22923	1	-12965	5prime_fragment	FALSE	canonical	3	265	junction_2	21.960075090017	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAAAGAACA	670	False	NA	NA	False	NA	NA	NA	100152146	100107963	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.4	chr13	-	2050	18	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	156	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	103.007407265483	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGGTTGTTGAGATG	870	False	NA	-4	True	AATAAA	-17	NA	100151946	100085038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100125646_100125762_100126744_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.7	chr13	-	2020	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	7	-1	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_3	69.7078725826574	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGGTTGTTGAGATG	676	False	NA	-4	True	AATAAA	-17	NA	100152140	100085038	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091220_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ES.9885.8	chr13	-	6073	15	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	1	intron_retention	FALSE	canonical	0	0	junction_4	109.248196174339	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTGTTGAGAT	690	False	NA	-5	True	AATAAA	-16	NA	100152126	100085039	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100095380_100097403_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100151893
ES.9886.1	chr13	+	1814	4	Antisense	novelGene_ENSMUSG00000049658.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGAAAGGAAGG	6515	False	NA	NA	False	NA	NA	NA	100159642	100172190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100160364_100161904_100162176_100167274_100167498_100171591
ES.9887.10	chr13	-	8272	31	NIC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	-12234	-2	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	13.3481584247915	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTGTTTTGTCCTTTT	NA	False	NA	-4	True	AATAAA	-14	NA	100215193	100154505	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186367_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166
ES.9887.12	chr13	-	2810	1	NIC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	26018	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTCTTGTTTTGTCCTT	NA	False	NA	-6	True	AATAAA	-12	NA	100157317	100154507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100154500_100157300
ES.9887.13	chr13	-	9908	38	NNC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	8	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	12.7568712775437	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCATTCTTGTTTTGTCC	6767	False	NA	-8	True	AATAAA	-10	NA	100240570	100154509	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100156919_100160107_100160364_100161904_100162182_100167270_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ES.9887.14	chr13	-	9455	39	FSM	ENSMUSG00000049658.14	ENSMUST00000038104.12	9921	39	1	465	1	-463	multi-exon	FALSE	canonical	3	16	junction_24	12.2627061132051	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGATGTAATTTATTGT	6760	False	NA	NA	False	AATAAA	-10	NA	100240577	100154966	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ES.9887.15	chr13	-	7761	38	FSM	ENSMUSG00000049658.14	ENSMUST00000109379.9	7567	38	-196	2	36	-2	multi-exon	FALSE	canonical	3	16	junction_23	11.5396860244433	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATTTGTATATTATTC	6795	False	NA	NA	False	AATAAA	-17	NA	100240542	100159814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ES.9887.17	chr13	-	4808	22	NNC	ENSMUSG00000049658.14	novel	7567	38	NA	NA	-4970	-7	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	12.6541291334878	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACTAGAATTTGTATAT	4428	False	NA	NA	False	AATAAA	-12	NA	100197691	100159819	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100160364_100161904_100162161_100163942_100163980_100167292_100167441_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801
ES.9887.2	chr13	-	9745	39	FSM	ENSMUSG00000049658.14	ENSMUST00000038104.12	9921	39	176	0	-17	0	multi-exon	FALSE	canonical	3	16	junction_24	12.2627061132051	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGTCCTTTTCAAA	6935	False	NA	0	True	AATAAA	-18	NA	100240402	100154501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ES.9887.7	chr13	-	9860	39	NNC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	12.8870277707679	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTTTGTCCTTTTCA	6761	False	NA	-2	True	AATAAA	-16	NA	100240576	100154503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167441_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ES.9888.1	chr13	-	151	1	Intergenic	novelGene_8256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	6362	False	NA	NA	False	NA	NA	NA	100240975	100240824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100240800_100241000
ES.9889.1	chr13	+	566	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	28	7	28	0	multi-exon	FALSE	canonical	3	69	junction_1	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATTGGTGAATATTA	NA	False	NA	NA	False	AATAAA	-18	NA	100244547	100250739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100244738_100245530_100245640_100250472
ES.989.1	chr1	-	5234	1	Antisense	novelGene_ENSMUSG00000036206.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGAGACCACAGGGCC	NA	False	NA	NA	False	NA	NA	NA	89082611	89077377	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89077400_89082600
ES.989.2	chr1	-	958	2	Antisense	novelGene_ENSMUSG00000036206.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTACGTCCTTTCTAAG	NA	False	NA	NA	False	ATTAAA	-16	NA	89119322	89081438	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89082362_89119287
ES.9890.1	chr13	+	1243	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	-13	-8	-13	8	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAGATATTTTCCTT	NA	False	NA	25	True	AATAAA	-21	NA	100261346	100274206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ES.9890.10	chr13	+	1142	8	NIC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	255.364964915163	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGACTTTATAGATAT	NA	False	NA	18	True	AATAAA	-14	NA	100261389	100274199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100273888
ES.9890.11	chr13	+	6052	7	ISM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	33	0	-9	0	intron_retention	FALSE	canonical	3	544	junction_6	101.238030842608	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261392	100274198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863
ES.9890.12	chr13	+	4511	8	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	-9	1	intron_retention	TRUE	non_canonical	0	0	junction_5	269.167727088747	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGACTTTATAGATAT	NA	False	NA	18	True	AATAAA	-14	NA	100261392	100274199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100265876_100266913_100267684_100268863_100268975_100272196
ES.9890.13	chr13	+	1659	5	NNC	ENSMUSG00000021645.17	novel	639	4	NA	NA	1075	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	314.420101138588	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100265457	100274198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100265875_100266913_100267684_100268863_100268975_100272196_100272248_100273888
ES.9890.2	chr13	+	1332	10	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	294.213830024657	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261357	100274198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100269762_100269871_100272196_100272248_100273888
ES.9890.3	chr13	+	1102	8	NIC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	259.431088722841	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261368	100274198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100272196_100272248_100273888
ES.9890.4	chr13	+	3874	6	NIC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	4	-3	intron_retention	FALSE	canonical	3	544	junction_4	122.427774626512	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATCTTGACTTTATAG	NA	False	NA	14	True	AATAAA	-10	NA	100261369	100274195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100261474_100263094_100263167_100263377_100264870_100267587_100267684_100268863_100268975_100272196
ES.9890.5	chr13	+	2853	8	ISM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	10	0	4	0	intron_retention	FALSE	canonical	3	544	junction_6	104.517550523091	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261369	100274198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196
ES.9890.6	chr13	+	2829	8	NIC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	7	-1	intron_retention	FALSE	canonical	3	544	junction_5	94.8181933803759	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTGACTTTATAGAT	NA	False	NA	16	True	AATAAA	-12	NA	100261372	100274197	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ES.9890.7	chr13	+	1175	9	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	13	-15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	252.346704704064	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCCTTTTTTGAAATC	NA	False	NA	2	True	ATTAAA	-2	NA	100261378	100274183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267688_100268880_100268975_100272196_100272248_100273888
ES.9890.8	chr13	+	1231	9	NNC	ENSMUSG00000021645.17	novel	1222	9	NA	NA	14	8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	251.823350783838	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAGATATTTTCCTT	NA	False	NA	25	True	AATAAA	-21	NA	100261379	100274206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273867
ES.9891.1	chr13	+	207	1	Intergenic	novelGene_8257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGTCTTAACTAG	NA	False	NA	NA	False	NA	NA	NA	100556846	100557053	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100556800_100557100
ES.9892.1	chr13	-	2034	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-2	490	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAAAACATTAC	NA	False	NA	NA	False	NA	NA	NA	100629089	100596235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.11	chr13	-	1588	16	ISM	ENSMUSG00000021639.18	ENSMUST00000145266.8	1630	18	-55	8476	-19	114	5prime_fragment	FALSE	canonical	3	30	junction_15	76.4776219992925	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100628901	100605201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
ES.9892.12	chr13	-	5968	1	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	2534	114	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	5790	False	NA	-10	True	ATTAAA	-16	NA	100611169	100605201	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100605200_100611200
ES.9892.15	chr13	-	5173	13	NIC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	6	112	intron_retention	FALSE	canonical	3	225	junction_7	32.9455569420555	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTTATTTTGAGC	NA	False	NA	-12	True	ATTAAA	-14	NA	100629081	100605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.16	chr13	-	3209	15	NIC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	-16	112	intron_retention	FALSE	canonical	3	225	junction_9	30.744835305449	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTTATTTTGAGC	NA	False	NA	-12	True	ATTAAA	-14	NA	100629103	100605203	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.17	chr13	-	3101	15	NIC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	-9	11	intron_retention	FALSE	canonical	3	225	junction_9	30.744835305449	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTTGAAAGAAGATCTG	NA	False	NA	-8	True	AATAAA	-43	NA	100629096	100605304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.18	chr13	-	3568	13	NIC	ENSMUSG00000021639.18	novel	1252	14	NA	NA	0	11	intron_retention	FALSE	canonical	3	225	junction_7	32.0662292069953	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTTGAAAGAAGATCTG	NA	False	NA	-8	True	AATAAA	-43	NA	100629087	100605304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.19	chr13	-	1484	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-48	220	-30	8	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACTTTGAAAGAAGAT	NA	False	NA	-11	True	AATAAA	-40	NA	100629117	100605307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.2	chr13	-	2041	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-1	489	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	99.5388586181296	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAACAAAAAAAACATTA	NA	False	NA	NA	False	NA	NA	NA	100628883	100596236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
ES.9892.20	chr13	-	1505	16	ISM	ENSMUSG00000021639.18	ENSMUST00000145266.8	1630	18	-78	8582	-42	8	5prime_fragment	FALSE	canonical	3	30	junction_15	76.4776219992925	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACTTTGAAAGAAGAT	NA	False	NA	-11	True	AATAAA	-40	NA	100628924	100605307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628750
ES.9892.21	chr13	-	2045	12	NNC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	3402	8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	149.693681720731	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCACTTTGAAAGAAGAT	NA	False	NA	-11	True	AATAAA	-40	NA	100625444	100605307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100605535_100606505_100607427_100612977_100613081_100613611_100613719_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100624274_100624375_100625356
ES.9892.22	chr13	-	1433	16	NNC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	83.4072738634547	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	False	NA	-19	True	AATAAA	-32	NA	100629092	100605315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613701_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.23	chr13	-	1875	16	NNC	ENSMUSG00000021639.18	novel	1796	15	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_6	129.784779110992	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	False	NA	-19	True	AATAAA	-32	NA	100629077	100605315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617548_100617600_100617719_100617811_100619445_100619552_100620931_100621060_100622578_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.24	chr13	-	3418	14	NNC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	2	-20	intron_retention	FALSE	canonical	2	3	junction_6	86.6621679912679	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGATTCTCTAATT	NA	False	NA	-39	True	AATAAA	-12	NA	100629059	100605335	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617474_100617600_100617719_100619552_100622578_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.4	chr13	-	1900	17	NNC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-2	436	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	121.972316915561	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACAACTGT	NA	False	NA	NA	False	NA	NA	NA	100629063	100596289	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617109_100617511_100617593_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.5	chr13	-	2345	16	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-20	435	intron_retention	FALSE	canonical	3	19	junction_1	77.1257558940087	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAACAACTG	NA	False	NA	NA	False	NA	NA	NA	100629107	100596290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.6	chr13	-	1957	17	NNC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	4	435	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103.094919855442	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAACAACTG	NA	False	NA	NA	False	NA	NA	NA	100629083	100596290	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100596929_100605422_100605519_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.7	chr13	-	3648	16	NNC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	-1	433	intron_retention	FALSE	canonical	2	3	junction_7	106.830582387879	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	100629088	100596292	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617474_100617600_100617719_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.8	chr13	-	1482	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	100629059	100596757	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9892.9	chr13	-	1542	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	7	107	-1	-107	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGAGCCATTTTTAT	NA	False	NA	-3	True	ATTAAA	-23	NA	100629062	100605194	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ES.9893.1	chr13	+	3009	1	Intergenic	novelGene_8259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGGTGGGGGATG	3503	False	NA	NA	False	GATAAA	-43	NA	100658800	100661809	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100658800_100661800
ES.9894.1	chr13	+	3598	1	Antisense	novelGene_ENSMUSG00000021638.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGAGCAGTGTTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	100669290	100672888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100669300_100672900
ES.9895.1	chr13	+	2710	2	Antisense	novelGene_ENSMUSG00000021638.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	5755	False	NA	NA	False	NA	NA	NA	100675481	100679325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100676442_100677575
ES.9896.1	chr13	-	4049	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	6	-3	6	3	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCCACTGTTTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	100689000	100633011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ES.9896.10	chr13	-	3171	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	68	-400	-27	400	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGTCAATTTTTTTTT	NA	False	NA	NA	False	GATAAA	-25	NA	100689158	100633870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ES.9896.11	chr13	-	3065	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	10	-236	10	236	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGATAGTGCTTCATA	NA	False	NA	NA	False	ATTAAA	-22	NA	100689216	100634034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ES.9896.12	chr13	-	2995	9	NNC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	0	236	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	26.7998950557647	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGATAGTGCTTCATA	NA	False	NA	NA	False	ATTAAA	-22	NA	100688968	100634034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651685_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ES.9896.13	chr13	-	2876	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	-8	1184	-8	72	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTGGGTGCTGTGCTA	NA	False	NA	NA	False	ACTAAA	-16	NA	100689014	100634198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ES.9896.15	chr13	-	2770	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTGCTCATTTGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100689013	100634274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
ES.9896.16	chr13	-	2072	8	NIC	ENSMUSG00000021638.13	novel	2839	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	31.4947355497223	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTGCTCATTTGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100689136	100634274	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100677575_100677693_100689071
ES.9896.17	chr13	-	2635	8	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	1	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	27.3861278752583	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100688967	100634275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100688894
ES.9896.18	chr13	-	2963	10	NNC	ENSMUSG00000021638.13	novel	2839	9	NA	NA	-209	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	28.7496645176347	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTGCTCATTTGATG	NA	False	NA	NA	False	ATTAAA	-17	NA	100689435	100634275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071_100689137_100689216
ES.9896.2	chr13	-	4035	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	-9	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCCACTGTTTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	100689015	100633011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
ES.9896.20	chr13	-	3028	8	ISM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	38	5006	0	-3399	5prime_fragment	FALSE	canonical	3	42	junction_7	12.9614813968157	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAACAAAGAT	NA	False	NA	NA	False	AATAAA	-21	NA	100688968	100638020	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ES.9896.21	chr13	-	233	1	Intergenic	novelGene_8258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACTTGGAAGGCCACAA	NA	False	NA	NA	False	NA	NA	NA	100640011	100639778	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100639800_100640000
ES.9896.3	chr13	-	3308	7	FSM	ENSMUSG00000021638.13	ENSMUST00000159459.8	1950	7	-95	-1263	0	3	multi-exon	FALSE	canonical	0	0	junction_6	29.1032644217105	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCCACTGTTTGCAG	NA	False	NA	NA	False	AATAAA	-20	NA	100689226	100633011	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100689071
ES.9896.4	chr13	-	3974	8	NNC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.6540938438531	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100689006	100633014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100635424_100642665_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
ES.9896.6	chr13	-	4085	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	10	-1256	10	0	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100689216	100633014	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ES.9896.8	chr13	-	3246	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	4	802	4	454	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATAGTACAAAAAAGTAT	NA	False	NA	NA	False	ATTAAA	-26	NA	100689002	100633816	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ES.9896.9	chr13	-	3177	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	-2	446	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGCTGAACATAGTACAA	NA	False	NA	NA	False	ATTAAA	-18	NA	100688970	100633824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
ES.9897.1	chr13	-	181	1	Intergenic	novelGene_8260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATAATTGATGT	NA	False	NA	NA	False	NA	NA	NA	100701445	100701264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100701300_100701400
ES.9898.1	chr13	-	3078	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	-18	1	-18	-1	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGTGCTCCTTAT	NA	False	NA	-2	True	ATTAAA	-17	NA	100753497	100732465	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
ES.9898.3	chr13	-	3360	7	FSM	ENSMUSG00000021636.16	ENSMUST00000225754.2	3111	7	-249	0	20	0	multi-exon	FALSE	canonical	1	3	junction_4	3.97562014729219	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	-3	True	ATTAAA	-16	NA	100753459	100732466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753112
ES.9899.1	chr13	+	176	1	Antisense	novelGene_ENSMUSG00000021635.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTTTTTCAAATAT	NA	False	NA	NA	False	NA	NA	NA	100766150	100766326	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100766200_100766300
ES.99.1	chr1	+	175	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	12604800	12604975	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_12604800_12605000
ES.990.1	chr1	+	9666	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-80	2335	-80	5	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTGTGGAGTGTCTT	NA	False	NA	15	True	AATAAA	-21	NA	89382447	89823004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.10	chr1	+	3987	16	NIC	ENSMUSG00000055013.17	novel	4078	17	NA	NA	-29	-26	combination_of_known_splicesites	FALSE	canonical	3	11	junction_11	106.011823239989	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89382498	89817697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.11	chr1	+	4376	19	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-20	-27	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	123.248268963378	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCATTGATTTTTGCAC	NA	False	NA	12	True	AATAAA	-13	NA	89382507	89817696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.12	chr1	+	9513	18	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-17	-4	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	144.000865049305	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACAGTGCTTCTGTG	NA	False	NA	6	True	AATAAA	-12	NA	89382510	89822995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.13	chr1	+	9438	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-83	-5277	-15	1	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGCTTCTGTGGAGTG	NA	False	NA	11	True	AATAAA	-17	NA	89382512	89823000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.14	chr1	+	4211	18	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-13	-26	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	144.000865049305	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89382514	89817697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.15	chr1	+	5111	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-81	-952	-13	952	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGCTGTCATTGCCT	NA	False	NA	NA	False	AATAGA	-2	NA	89382514	89818675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.16	chr1	+	4102	18	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-4	-230	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	103.466926330546	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAATCATGAATTCGGC	NA	False	NA	23	True	NA	NA	NA	89382523	89817493	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716861_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.17	chr1	+	4112	17	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	5	-26	combination_of_known_splicesites	FALSE	canonical	3	23	junction_12	100.837256724635	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89382532	89817697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.18	chr1	+	3962	18	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	13	-249	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	144.000865049305	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCACTTGGAAATTCTAA	NA	False	NA	4	True	AAAACA	-31	NA	89382540	89817474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.19	chr1	+	3973	18	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	13	-235	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	131.991427843711	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAACGAAATCATGAAT	NA	False	NA	18	True	AAAACA	-45	NA	89382540	89817488	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.2	chr1	+	4223	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-148	3	-80	-3	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCACCCATGTTAATT	NA	False	NA	36	True	AATAAA	-37	NA	89382447	89817720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.20	chr1	+	4268	18	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	13	-32	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	103.189146716115	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAATATGCATTGATTTT	NA	False	NA	7	True	AATAAA	-8	NA	89382540	89817691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653796_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.21	chr1	+	9661	19	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.856287807076	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACAGTGCTTCTGTGGAG	NA	False	NA	9	True	AATAAA	-15	NA	89382542	89822998	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89520083_89520180_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.22	chr1	+	4248	19	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	17	-29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	148.952940202809	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCATTGATTTTTGC	NA	False	NA	10	True	AATAAA	-11	NA	89382544	89817694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770877_89815227_89815484_89816412
ES.990.23	chr1	+	3722	16	NIC	ENSMUSG00000055013.17	novel	4078	17	NA	NA	31	-231	combination_of_known_splicesites	FALSE	canonical	3	11	junction_11	106.011823239989	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGAAATCATGAATTCGG	NA	False	NA	22	True	NA	NA	NA	89382558	89817492	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.24	chr1	+	3653	18	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	158	-29	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	102.884892175976	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCATTGATTTTTGC	NA	False	NA	10	True	AATAAA	-11	NA	89383135	89817694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591397_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.25	chr1	+	3110	16	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	19737	-238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	143.442284173422	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAACGAAATCATG	NA	False	NA	15	True	AAAACA	-42	NA	89402714	89817485	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89402866_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.26	chr1	+	4132	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCGGGGACGGGGGGAGA	NA	False	NA	NA	False	AATAAA	-7	NA	89424205	89428337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89424200_89428300
ES.990.27	chr1	+	4747	17	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	2	-28	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	128.995624320168	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATTGATTTTTGCA	NA	False	NA	11	True	AATAAA	-12	NA	89507959	89817695	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.28	chr1	+	4658	18	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	32	-246	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	103.172680861382	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTGGAAATTCTAAACG	NA	False	NA	7	True	AAAACA	-34	NA	89507989	89817477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.29	chr1	+	4744	19	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	42	-228	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	148.060798322851	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAATCATGAATTCGGCTG	NA	False	NA	25	True	NA	NA	NA	89507999	89817495	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.3	chr1	+	4373	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-71	7619	-71	-3	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCACCCATGTTAATT	NA	False	NA	36	True	AATAAA	-37	NA	89382456	89817720	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.30	chr1	+	4893	18	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	103.172680861382	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCATGTTAATTTAT	NA	False	NA	39	True	AATAAA	-40	NA	89508000	89817723	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.31	chr1	+	4918	19	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	70	-26	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	148.060798322851	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89508027	89817697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.32	chr1	+	167	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAAAAAACTGAGAA	NA	False	NA	NA	False	NA	NA	NA	89553488	89553655	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89553500_89553700
ES.990.33	chr1	+	4337	2	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	161	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGTCAATAGCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	89567957	89572395	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89570661_89570761
ES.990.34	chr1	+	142	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTGGGGAAGGCAAA	7687	False	NA	NA	False	AATAGA	-26	NA	89667035	89667177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89667000_89667200
ES.990.35	chr1	+	160	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	89681874	89682034	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89681900_89682000
ES.990.4	chr1	+	4156	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-71	7836	-71	-220	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCGGCTGAAAACAGC	NA	False	NA	33	True	NA	NA	NA	89382456	89817503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.5	chr1	+	3989	17	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-69	-223	combination_of_known_splicesites	FALSE	canonical	3	23	junction_12	100.837256724635	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAATTCGGCTGAAAAC	NA	False	NA	30	True	NA	NA	NA	89382458	89817500	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.6	chr1	+	4225	19	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-62	-220	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	123.248268963378	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTCGGCTGAAAACAGC	NA	False	NA	33	True	NA	NA	NA	89382465	89817503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.7	chr1	+	4450	19	NNC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	-31	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	132.856287807076	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATTGATTTTTGCACA	NA	False	NA	13	True	AATAAA	-14	NA	89382496	89817697	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89383315_89488432_89488573_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.8	chr1	+	3950	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	-98	226	-30	-226	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATGAATTCGGCTGAA	NA	False	NA	27	True	NA	NA	NA	89382497	89817497	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.990.9	chr1	+	5306	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	-30	6645	-30	971	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGAAGAATGCGTTA	NA	False	NA	NA	False	AATAGA	-21	NA	89382497	89818694	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ES.9900.1	chr13	+	96	1	Intergenic	novelGene_8261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100781289	100781385	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100781300_100781400
ES.9901.1	chr13	+	211	1	Intergenic	novelGene_8263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTTCCCTTAGGGAAAC	NA	False	NA	NA	False	AAGAAA	-14	NA	100785464	100785675	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100785500_100785700
ES.9901.10	chr13	+	1322	3	FSM	ENSMUSG00000052293.15	ENSMUST00000185767.7	778	3	0	-544	0	0	multi-exon	FALSE	canonical	3	39	junction_1	620	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100788091	100792567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100788295_100790698_100790792_100791541
ES.9901.11	chr13	+	1773	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	-10	-533	-10	532	multi-exon	FALSE	canonical	3	171	junction_1	554	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTC	NA	False	NA	NA	False	NA	NA	NA	100788104	100793100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100788226_100790698_100790792_100791541
ES.9901.12	chr13	+	1076	5	NIC	ENSMUSG00000052293.15	novel	824	3	NA	NA	-10	10312	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	371.407037493906	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTAGGTGATCTCTTAG	NA	False	NA	-34	True	AATAAA	-27	NA	100788104	100802880	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100788337_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ES.9901.13	chr13	+	938	5	NIC	ENSMUSG00000052293.15	novel	794	3	NA	NA	3	10298	combination_of_known_splicesites	FALSE	canonical	3	171	junction_1	308.682988679325	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACATCTCTTTAATAGT	NA	False	NA	36	True	AATAAA	-13	NA	100788117	100802866	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_100788226_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ES.9901.15	chr13	+	1812	3	FSM	ENSMUSG00000052293.15	ENSMUST00000185767.7	778	3	43	-1077	1	532	multi-exon	FALSE	canonical	3	39	junction_1	620	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTC	NA	False	NA	NA	False	NA	NA	NA	100788134	100793100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100788295_100790698_100790792_100791541
ES.9901.2	chr13	+	619	2	Genic_Genomic	ENSMUSG00000078941.10	novel	1222	3	NA	NA	-2022	8	multi-exon	FALSE	non_canonical	0	0	junction_1	0	583	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGGCAGTTATGTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	100785464	100792575	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_100785554_100792045
ES.9901.3	chr13	+	181	1	Intergenic	novelGene_8264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCAACGAT	NA	False	NA	NA	False	NA	NA	NA	100786497	100786678	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100786500_100786700
ES.9901.4	chr13	+	1216	3	NNC	ENSMUSG00000078941.10	novel	1298	5	NA	NA	171	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	627	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100787657	100792567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100787755_100790698_100790792_100791541
ES.9901.5	chr13	+	1943	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	-174	-547	-174	547	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTTCTCATTATACA	NA	False	NA	NA	False	NA	NA	NA	100787676	100793114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100787954_100790698_100790792_100791541
ES.9901.6	chr13	+	1373	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	-142	-9	-142	9	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCAGTTATGTTTTC	NA	False	NA	NA	False	AATAAA	-29	NA	100787708	100792576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100787954_100790698_100790792_100791541
ES.9901.7	chr13	+	1700	3	NNC	ENSMUSG00000078941.10	novel	1298	5	NA	NA	-142	547	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	639.5	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTTTCTCATTATACA	NA	False	NA	NA	False	NA	NA	NA	100787708	100793114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100787743_100790698_100790792_100791541
ES.9901.8	chr13	+	991	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	360	-53	-4	53	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGGTCAGTATTGCTT	NA	False	NA	6	True	ATTAAA	-2	NA	100787846	100802920	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ES.9901.9	chr13	+	1401	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	-171	0	-143	0	multi-exon	FALSE	canonical	3	171	junction_1	554	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100787943	100792567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100788226_100790698_100790792_100791541
ES.9902.1	chr13	-	2991	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-284	-315	-280	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787839	100753671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.10	chr13	-	2809	16	NIC	ENSMUSG00000021635.15	novel	2392	17	NA	NA	-258	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	52.805134430491	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTCTTCTTATCC	NA	False	NA	-9	True	ATTAAA	-12	NA	100787817	100753674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.11	chr13	-	2818	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	-1	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	62.9731775738687	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTCTTCTTATCC	NA	False	NA	-9	True	ATTAAA	-12	NA	100787560	100753674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780093_100781498_100781754_100786185_100786290_100787329
ES.9902.12	chr13	-	2408	16	NNC	ENSMUSG00000021635.15	novel	2392	17	NA	NA	-12	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	70.3080839353958	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTCTTCTTATCC	NA	False	NA	-9	True	ATTAAA	-12	NA	100787571	100753674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754239_100755590_100755660_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.13	chr13	-	3176	16	NIC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	15	-3	intron_retention	FALSE	canonical	3	38	junction_15	44.1730938719739	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTGTTCTTCTTATCC	NA	False	NA	-9	True	ATTAAA	-12	NA	100787540	100753674	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
ES.9902.14	chr13	-	2824	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	-18	7	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	50.35979919539	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGCATCTAGCTTTTCG	NA	False	NA	-7	True	AATAAA	-18	NA	100787577	100753786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787247
ES.9902.15	chr13	-	2615	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	-25	-198	-21	5	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCATCTAGCTTTT	NA	False	NA	-9	True	AATAAA	-16	NA	100787580	100753788	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.16	chr13	-	2378	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	15	-1	15	1	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTGCTTAGTATTTAT	NA	False	NA	NA	False	AGTAAA	-14	NA	100787540	100753985	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.17	chr13	-	1862	4	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	4	24716	4	-12679	5prime_fragment	FALSE	canonical	3	174	junction_3	25.74662868977	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAGAAAAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	100787551	100778702	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100780112_100781498_100781754_100786185_100786290_100787457
ES.9902.19	chr13	-	3936	1	NIC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	4867	-12684	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAAGAAAAGA	3963	False	NA	NA	False	NA	NA	NA	100782643	100778707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100778700_100782600
ES.9902.2	chr13	-	2902	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	50.35979919539	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787540	100753671	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787247
ES.9902.20	chr13	-	1978	4	ISM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	13	25038	9	-12686	5prime_fragment	FALSE	canonical	3	38	junction_3	87.7762306474063	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	100787546	100778709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100780112_100781498_100781754_100786185_100786290_100787329
ES.9902.21	chr13	-	3221	3	NIC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	0	-12715	intron_retention	FALSE	canonical	3	174	junction_2	31.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100787559	100778738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100781754_100786185_100786290_100787457
ES.9902.22	chr13	-	179	1	Intergenic	novelGene_8262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTTTTTTTCCATGT	2778	False	NA	NA	False	NA	NA	NA	100783828	100783649	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100783600_100783800
ES.9902.3	chr13	-	2838	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	0	1	0	-1	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787559	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
ES.9902.5	chr13	-	3043	17	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	13	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	51.5114899197257	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787542	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787107
ES.9902.6	chr13	-	2635	16	NIC	ENSMUSG00000021635.15	novel	2392	17	NA	NA	-29	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	51.7074677606845	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787588	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100787457
ES.9902.7	chr13	-	5822	2	NIC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	107	-1	intron_retention	FALSE	canonical	3	204	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100760995	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100759427_100760927
ES.9902.8	chr13	-	2895	16	NNC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	69.7527697578303	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787541	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787107
ES.9902.9	chr13	-	2791	18	NNC	ENSMUSG00000021635.15	novel	2745	18	NA	NA	164	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	66.2830253259972	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTCTTCTTATCCTT	NA	False	NA	-7	True	ATTAAA	-14	NA	100787346	100753672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100786734_100786819_100787247
ES.9903.1	chr13	-	8680	1	Antisense	novelGene_ENSMUSG00000078941.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTAAGAAACTAGGTCA	NA	False	NA	NA	False	AATAAA	-32	NA	100801660	100792980	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_100793000_100801700
ES.9903.2	chr13	-	2781	1	Antisense	novelGene_ENSMUSG00000078941.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAGTGTAGGATACCA	NA	False	NA	NA	False	NA	NA	NA	100804339	100801558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_100801600_100804300
ES.9904.1	chr13	+	3848	12	FSM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	-311	-1124	-255	1124	multi-exon	FALSE	canonical	1	1	junction_1	5.01073228346206	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATGTGTTTTATAGTT	NA	False	NA	NA	False	ATTAAA	-24	NA	100805969	100834872	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ES.9904.2	chr13	+	2594	12	FSM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	-182	1	-126	-1	multi-exon	FALSE	canonical	1	1	junction_1	5.01073228346206	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTTTCAATGTCTCT	NA	False	NA	4	True	TATAAA	-17	NA	100806098	100833747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ES.9904.3	chr13	+	2733	13	NNC	ENSMUSG00000048924.15	novel	2413	12	NA	NA	9	657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5.78971789756058	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACTAACAAA	NA	False	NA	NA	False	NA	NA	NA	100806233	100834405	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618_100833269_100833652
ES.9904.4	chr13	+	3079	12	NNC	ENSMUSG00000048924.15	novel	2413	12	NA	NA	66	693	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	4.04724168900947	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTATCTGATCCTCATT	NA	False	NA	NA	False	NA	NA	NA	100806346	100834441	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100806399_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ES.9904.5	chr13	+	2382	12	NNC	ENSMUSG00000048924.15	novel	2413	12	NA	NA	68	-2	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	4.04724168900947	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACAGTTTCAATGTCTC	NA	False	NA	3	True	TATAAA	-16	NA	100806348	100833746	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100806399_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ES.9904.6	chr13	+	2649	14	NNC	ENSMUSG00000048924.15	novel	2413	12	NA	NA	78	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.25683058697316	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTTTCAATGTCTCT	NA	False	NA	4	True	TATAAA	-17	NA	100806358	100833747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100806470_100809957_100810055_100812572_100812681_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ES.9904.7	chr13	+	1593	12	NNC	ENSMUSG00000048924.15	novel	1216	10	NA	NA	89	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5.83803431200084	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGTTTCAATGTCTCT	NA	False	NA	4	True	TATAAA	-17	NA	100806369	100833747	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_100806470_100812572_100812681_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830207_100833425
ES.9904.8	chr13	+	172	1	Intergenic	novelGene_8265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATTGCATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100810032	100810204	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100810000_100810200
ES.9904.9	chr13	+	141	1	Intergenic	novelGene_8268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100826019	100826160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100826000_100826200
ES.9905.1	chr13	+	207	1	Intergenic	novelGene_8272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGATCTTCGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	100868422	100868629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100868400_100868600
ES.9906.1	chr13	+	325	1	Intergenic	novelGene_8273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACTAAAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	100869480	100869805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100869500_100869800
ES.9906.2	chr13	+	165	1	Intergenic	novelGene_8274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	100869481	100869646	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100869500_100869600
ES.9907.1	chr13	+	179	1	Intergenic	novelGene_8275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100870501	100870680	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100870500_100870700
ES.9907.2	chr13	+	389	1	Intergenic	novelGene_8276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCGTAAAA	NA	False	NA	NA	False	NA	NA	NA	100870502	100870891	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100870500_100870900
ES.9908.1	chr13	+	181	1	Intergenic	novelGene_8277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGCTGTTAATAGAG	NA	False	NA	NA	False	NA	NA	NA	100876764	100876945	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100876800_100876900
ES.9909.1	chr13	+	781	1	Antisense	novelGene_ENSMUSG00000061474.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGAAAAGCATAT	NA	False	NA	NA	False	NA	NA	NA	100879418	100880199	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100879400_100880200
ES.991.1	chr1	-	1510	1	Antisense	novelGene_ENSMUSG00000055013.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	89384499	89382989	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383000_89384500
ES.991.11	chr1	-	1952	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653789_89671451_89671624_89694037_89694185_89716882_89717045_89762153
ES.991.15	chr1	-	1893	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89476224_89476323_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89716882_89717045_89762153
ES.991.19	chr1	-	1792	13	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89716882_89717041_89762152
ES.991.2	chr1	-	1800	13	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	89762310	89382993	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694186_89762154
ES.991.21	chr1	-	1605	11	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89555480_89555527_89558105_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694186_89762154
ES.991.22	chr1	-	2032	15	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694185_89716882_89717045_89751576_89751655_89762153
ES.991.25	chr1	-	1966	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694186_89716871_89717045_89762153
ES.991.26	chr1	-	1633	12	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89383001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671616_89762152
ES.991.29	chr1	-	1847	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	89762310	89383028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89716882_89717045_89751576_89751656_89762153
ES.991.31	chr1	-	5685	11	Antisense	novelGene_ENSMUSG00002076983.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	89664384	89383028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89655413_89661606
ES.991.35	chr1	-	4876	17	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	89818950	89383028	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89716882_89717045_89762153_89762309_89765431_89765525_89770742_89770964_89815225_89815482_89816410
ES.991.38	chr1	-	4776	1	Antisense	novelGene_ENSMUSG00000055013.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGGGGGGAGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	89564170	89559394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89559400_89564200
ES.991.39	chr1	-	2157	1	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGAGGGAAAGTGCACAA	NA	False	NA	NA	False	NA	NA	NA	89713317	89711160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_89711200_89713300
ES.991.40	chr1	-	8398	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCCTCATAAAAATGGCAC	NA	False	NA	NA	False	NA	NA	NA	89727365	89718967	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_89719000_89727400
ES.991.5	chr1	-	5947	18	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89819831	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694185_89716882_89717045_89762153_89762309_89765431_89765525_89770742_89770964_89815225_89815482_89816410
ES.991.6	chr1	-	2187	9	Antisense	novelGene_ENSMUSG00002075930.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89594030	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89593360_89593406
ES.991.7	chr1	-	1959	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562013_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694185_89716882_89717038_89762142
ES.991.8	chr1	-	1961	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532379_89537216_89537311_89555485_89555566_89558106_89558251_89561880_89562016_89591379_89591509_89592753_89592912_89598901_89598992_89653680_89653784_89671445_89671614_89694019_89694185_89716882_89717045_89762153
ES.991.9	chr1	-	1978	14	Antisense	novelGene_ENSMUSG00000103252.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	89762310	89382997	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89383313_89532317_89532378_89537216_89537311_89555485_89555566_89558106_89558248_89561878_89562016_89591379_89591509_89592753_89592912_89598900_89598992_89653680_89653784_89671445_89671617_89694025_89694185_89716861_89717045_89762153
ES.9910.1	chr13	-	176	1	Intergenic	novelGene_8266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGATAAAGTGAATAT	7474	False	NA	NA	False	NA	NA	NA	100825984	100825808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100825800_100826000
ES.9910.10	chr13	-	1860	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	18	110	8	-110	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-28	NA	100867429	100839248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.12	chr13	-	1697	10	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-3	-153	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	235.310564421564	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	100867411	100839291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100866965_100867026_100867281
ES.9910.14	chr13	-	1370	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	-34	652	-34	27	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGCAGTCTCTAAAAT	NA	False	NA	-2	True	AATAAA	-30	NA	100867481	100839790	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.15	chr13	-	2625	8	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-1889	18	intron_retention	FALSE	canonical	3	644	junction_3	49.180218356073	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAAGGATAACTGCAGT	NA	False	NA	-11	True	AATAAA	-21	NA	100857767	100839799	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100854191_100855809_100855879_100857093
ES.9910.19	chr13	-	3353	5	NNC	ENSMUSG00000069089.9	novel	1159	11	NA	NA	2092	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	312.20215806429	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATATTTGTGATTTATG	NA	False	NA	-36	True	ATTAAA	-12	NA	100846356	100839824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841261_100841586_100842237_100842704_100843231_100844731
ES.9910.2	chr13	-	174	2	Intergenic	novelGene_8267	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	293	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGATAAAGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	100849756	100825808	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100825818_100849591
ES.9910.20	chr13	-	4589	4	NIC	ENSMUSG00000069089.9	novel	1159	11	NA	NA	-2687	-8	intron_retention	FALSE	canonical	3	644	junction_2	65.2124732445156	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100851135	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100841047_100842874_100843025_100846581_100846669_100848004
ES.9910.21	chr13	-	1064	10	NIC	ENSMUSG00000069089.9	novel	1159	11	NA	NA	-3	-8	combination_of_known_splicesites	FALSE	canonical	3	42	junction_5	228.326006911387	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867440	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.22	chr13	-	1213	12	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-11	-8	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	221.624692063478	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867419	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841047_100842874_100842965_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.23	chr13	-	2608	11	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-10	-8	intron_retention	FALSE	canonical	3	644	junction_3	46.9835077447395	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867418	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.24	chr13	-	1376	13	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	284.255411362544	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867412	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100846893_100847004_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.25	chr13	-	2132	11	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	14	-8	intron_retention	FALSE	canonical	3	644	junction_2	45.6219245538809	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867394	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.26	chr13	-	3284	12	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	34	-8	intron_retention	FALSE	non_canonical	0	0	junction_3	222.195171448157	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867374	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841047_100842874_100843231_100844731_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.27	chr13	-	1416	13	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	282.817999486124	279	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867445	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100862029_100862147_100866965_100867026_100867281
ES.9910.28	chr13	-	1983	5	ISM	ENSMUSG00000069089.9	ENSMUST00000225990.2	1159	11	17995	8	-965	-8	3prime_fragment	FALSE	canonical	3	644	junction_3	56.6414159427534	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100849413	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004
ES.9910.29	chr13	-	1233	12	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	33	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	221.774995796033	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867375	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857089_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.3	chr13	-	316	1	Intergenic	novelGene_8269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	6952	False	NA	NA	False	AATAAA	-6	NA	100826506	100826190	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100826200_100826500
ES.9910.30	chr13	-	1160	11	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	34	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	229.329653555749	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATTTGTGATTTAT	NA	False	NA	-37	True	ATTAAA	-11	NA	100867374	100839825	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100859187_100859222_100866965_100867026_100867281
ES.9910.31	chr13	-	1142	10	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	-6	-71	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	235.310564421564	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTCTACAGATGTA	NA	False	NA	-100	True	ATTAAA	-19	NA	100867453	100839888	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100866965_100867026_100867281
ES.9910.32	chr13	-	177	1	Intergenic	novelGene_8270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAACTAACAAA	NA	False	NA	NA	False	NA	NA	NA	100844101	100843924	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100843900_100844100
ES.9910.33	chr13	-	2919	1	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	725	1	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100847723	100844804	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100844800_100847700
ES.9910.34	chr13	-	250	1	Intergenic	novelGene_8271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATATAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	100849761	100849511	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100849500_100849800
ES.9910.35	chr13	-	179	2	Antisense	novelGene_ENSMUSG00000085340.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	100911430	100849582	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_100849733_100911401
ES.9910.36	chr13	-	705	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	12	-16	10	16	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAGATGTAAAGATAATT	NA	False	NA	NA	False	AATAAA	-17	NA	100881155	100872446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ES.9910.37	chr13	-	620	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	578.671082932457	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTCCCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	100881101	100872468	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881046
ES.9910.38	chr13	-	670	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	16	-115	16	-7	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAAATGTCCCTTTTCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	100881149	100872469	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ES.9910.39	chr13	-	1585	2	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	3109	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTATTAACTTGCTCTT	NA	False	NA	NA	False	ATTAAA	-19	NA	100877512	100872536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100873481_100876871
ES.9910.4	chr13	-	7359	10	NIC	ENSMUSG00000069089.9	novel	1159	11	NA	NA	-4	5607	combination_of_known_splicesites	FALSE	canonical	3	42	junction_5	228.326006911387	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAGCGTCTTCATATT	NA	False	NA	-3	True	AATAAA	-20	NA	100867441	100833531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.40	chr13	-	4338	6	NNC	ENSMUSG00000061474.12	novel	469	5	NA	NA	-3921	45	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	594.197071685817	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGCCTATTAACTTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	100885088	100872539	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100880296_100880333_100881238_100884301_100884342
ES.9910.41	chr13	-	510	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	18	173	16	1	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCAGGTGGTCACTTG	NA	False	NA	NA	False	AATAAA	-27	NA	100881149	100872635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ES.9910.42	chr13	-	2409	3	NIC	ENSMUSG00000061474.12	novel	701	4	NA	NA	14	1	intron_retention	FALSE	canonical	3	1082	junction_2	99.5	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCAGGTGGTCACTTG	NA	False	NA	NA	False	AATAAA	-27	NA	100881082	100872635	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100872782_100875521_100877740_100881037
ES.9910.43	chr13	-	332	3	NIC	ENSMUSG00000061474.12	novel	701	4	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	3	70	junction_1	506	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACAGAAACTCCAGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	100881167	100872643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100872782_100877675_100877740_100881037
ES.9910.44	chr13	-	509	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	-1	63	-1	-11	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAGTACAGAAACTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	100881166	100872647	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ES.9910.45	chr13	-	7602	4	NNC	ENSMUSG00000061474.12	novel	672	4	NA	NA	-3879	-9	intron_retention	FALSE	non_canonical	0	0	junction_3	578.671082932457	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAGTCATATATTA	NA	False	NA	NA	False	AATAAA	-17	NA	100885046	100872696	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100872782_100875521_100875710_100877675_100884301_100884342
ES.9910.46	chr13	-	3524	1	Genic_Genomic	ENSMUSG00000061474.12	novel	NA	NA	NA	NA	-1696	576	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTACTCCATTCCGATGG	NA	False	NA	NA	False	NA	NA	NA	100882863	100879339	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_100879300_100882900
ES.9910.47	chr13	-	2280	2	NNC	ENSMUSG00000061474.12	novel	555	2	NA	NA	-3881	528	intron_retention	FALSE	canonical	0	0	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAAGAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	100885048	100879387	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100881585_100884965
ES.9910.48	chr13	-	3633	2	Intergenic	novelGene_8278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTTCAGATTAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	100885054	100881379	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100884301_100884342
ES.9910.49	chr13	-	271	1	Intergenic	novelGene_8279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAC	NA	False	NA	NA	False	NA	NA	NA	100882288	100882017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100882000_100882300
ES.9910.5	chr13	-	6851	13	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	3	5607	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	278.819037290418	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAGCGTCTTCATATT	NA	False	NA	-3	True	AATAAA	-20	NA	100867444	100833531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100837867_100838605_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857095_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.50	chr13	-	4226	7	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	-3	-5	intron_retention	TRUE	canonical	3	316	junction_5	19.3168032782055	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTGCAGGACTGGAG	NA	False	NA	-4	True	AATAAA	-36	NA	100912410	100896186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100903390_100907702_100908212_100909233_100909290_100912194
ES.9910.51	chr13	-	2656	7	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	-3	-5	intron_retention	FALSE	canonical	3	323	junction_2	16.4079926323186	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTTGCAGGACTGGAG	NA	False	NA	-4	True	AATAAA	-36	NA	100912410	100896186	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100909290_100912194
ES.9910.52	chr13	-	1242	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	-3	12	-3	-12	multi-exon	FALSE	canonical	3	285	junction_6	26.2865816530031	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912410	100896193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.53	chr13	-	1048	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	27	-12	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	115.35888985851	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912380	100896193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.54	chr13	-	1299	10	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	33	-12	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	138.91484201961	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912374	100896193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
ES.9910.55	chr13	-	1608	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	16	-12	intron_retention	FALSE	canonical	3	316	junction_6	18.9413703359625	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATACTTGCAGG	NA	False	NA	-11	True	AATAAA	-29	NA	100912391	100896193	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100908212_100909233_100909290_100912194
ES.9910.57	chr13	-	4022	6	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	28	-14	intron_retention	FALSE	canonical	3	19	junction_1	132.762946637983	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAAGAATACTTGCA	NA	False	NA	-13	True	AATAAA	-27	NA	100912379	100896195	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100900057_100900110_100900676_100903390_100907702_100908212_100909233_100909290_100912194
ES.9910.58	chr13	-	3653	9	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	50	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	112.945783453832	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAATAAACATTA	NA	False	NA	-45	True	NA	NA	NA	100912357	100896227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100900834_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.59	chr13	-	1197	9	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	33	-50	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	160.811224732604	134	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAATAAAAAGAATAAAC	NA	False	NA	-49	True	NA	NA	NA	100912374	100896231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
ES.9910.6	chr13	-	7581	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	11	-5604	1	5604	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTACAGCGTCTTCAT	NA	False	NA	-6	True	AATAAA	-17	NA	100867436	100833534	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.60	chr13	-	4225	7	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	-38	-107	intron_retention	FALSE	canonical	3	285	junction_4	27.7228345512423	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTGTGTCTTCTTTTCT	NA	False	NA	-106	True	NA	NA	NA	100912329	100896288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100898268_100898433_100900057_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.61	chr13	-	1013	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	17	221	17	-221	multi-exon	FALSE	canonical	3	285	junction_6	26.2865816530031	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGGGCGGTCCTGCTGCC	NA	False	NA	0	True	ATTAAA	-44	NA	100912390	100896402	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.62	chr13	-	978	9	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	20	-250	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	113.437138429176	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCTGGCCGTGGAGGC	NA	False	NA	-29	True	ATTAAA	-15	NA	100912387	100896431	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909284_100912191
ES.9910.63	chr13	-	907	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	9	335	9	-335	multi-exon	FALSE	canonical	3	285	junction_6	26.2865816530031	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGCTTCAGTTTTGGG	NA	False	NA	0	True	TTTAAA	-44	NA	100912398	100896516	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ES.9910.64	chr13	-	770	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	-25	-341	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	120.75105103696	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACTCTGCTGCTTCAGT	NA	False	NA	-6	True	TTTAAA	-38	NA	100912316	100896522	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100909233_100909290_100912194
ES.9910.65	chr13	-	634	4	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	43	5644	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	168.274247055877	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGGCTCATCGATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	100912364	100903056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100903390_100907702_100907778_100909233_100909290_100912194
ES.9910.8	chr13	-	6485	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	10	-4507	0	4507	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTCCAGTATGTTTCA	NA	False	NA	NA	False	AATAAA	-36	NA	100867437	100834631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9910.9	chr13	-	1996	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	-13	5	-13	-5	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCTTTGTTTATGGA	NA	False	NA	NA	False	CATAAA	-12	NA	100867460	100839143	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ES.9911.1	chr13	+	1870	3	Antisense	novelGene_ENSMUSG00000021629.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAACAGCATACTAG	NA	False	NA	NA	False	AATAAA	-7	NA	100922599	100956079	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100922780_100934503_100934720_100954605
ES.9911.2	chr13	+	2145	3	Antisense	novelGene_ENSMUSG00000021629.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTTATGTGTATGAG	NA	False	NA	NA	False	ATTAAA	-12	NA	100925723	100941244	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100925800_100934503_100934720_100939391
ES.9911.3	chr13	+	1770	3	Antisense	novelGene_ENSMUSG00000021629.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAGCATACTAGTCTAT	NA	False	NA	NA	False	AATAAA	-12	NA	100925724	100956084	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_100925800_100934503_100934720_100954605
ES.9911.4	chr13	+	177	1	Intergenic	novelGene_8282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	100948934	100949111	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100948900_100949100
ES.9912.1	chr13	-	4002	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	71	-1584	-13	1584	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGCTGTAGTACTTTGA	NA	False	NA	NA	False	NA	NA	NA	100923007	100913573	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.10	chr13	-	2196	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1296.11771952132	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCCCTTTTGACTGTT	NA	False	NA	-4	True	AATAAA	-30	NA	100923006	100915237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.11	chr13	-	4145	8	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	3215	junction_5	289.259998857041	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100923007	100915239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100922127_100922240_100922412_100922889
ES.9912.12	chr13	-	2315	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1575.64133271979	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922992	100915239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917419_100917665_100917903_100918132_100918288_100919968_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.13	chr13	-	6935	4	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-13	0	intron_retention	FALSE	canonical	3	3468	junction_1	225.117746968114	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100923007	100915239	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100917425_100917665_100922127_100922240_100922412_100922889
ES.9912.14	chr13	-	4064	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	23	-1	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTGCCCTTTTGACT	NA	False	NA	-7	True	AATAAA	-27	NA	100923055	100915240	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.15	chr13	-	6051	6	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-12	-4	intron_retention	FALSE	canonical	3	3468	junction_3	249.128882307933	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCATTTGCCCTTTTG	NA	False	NA	-10	True	AATAAA	-24	NA	100923006	100915243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100922127_100922240_100922412_100922889
ES.9912.16	chr13	-	4239	7	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-9	-4	intron_retention	FALSE	canonical	3	2476	junction_4	514.715698225729	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCATTTGCCCTTTTG	NA	False	NA	-10	True	AATAAA	-24	NA	100923003	100915243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.17	chr13	-	2199	10	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1167.55775493597	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCATTTGCCCTTTTG	NA	False	NA	-10	True	AATAAA	-24	NA	100922996	100915243	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100915356_100915477_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.19	chr13	-	2612	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	30	-6	intron_retention	FALSE	canonical	3	2476	junction_5	489.114652057309	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTCATTTGCCCTTT	NA	False	NA	-12	True	AATAAA	-22	NA	100923048	100915245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.2	chr13	-	3145	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	75	-731	-9	731	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTGGTCCTTGTATG	NA	False	NA	NA	False	NA	NA	NA	100923003	100914426	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.20	chr13	-	2268	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1237.16560507274	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTCATTTGCCCTTT	NA	False	NA	-12	True	AATAAA	-22	NA	100922978	100915245	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918259_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.21	chr13	-	1950	8	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-18	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1316.95836947824	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923012	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917688_100919982_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.22	chr13	-	2337	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-23	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	1237.16560507274	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923017	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919974_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.23	chr13	-	4655	7	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-15	-7	intron_retention	FALSE	canonical	3	2476	junction_4	517.186861782084	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923009	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.25	chr13	-	2320	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1233.81560109281	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923005	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918139_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.26	chr13	-	2401	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-10	-7	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_5	1229.46421257392	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923004	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919897_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.27	chr13	-	2274	10	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1167.55775493597	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923006	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922019_100922072_100922127_100922240_100922412_100922889
ES.9912.28	chr13	-	2239	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	-7	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_5	1198.12079420232	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100923007	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100920062_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.29	chr13	-	5114	5	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-3	-7	intron_retention	FALSE	canonical	3	2476	junction_2	629.619875401023	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATTCTCATTTGCCCTT	NA	False	NA	-13	True	AATAAA	-21	NA	100922997	100915246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.3	chr13	-	2243	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	-22	-81	-22	-1	multi-exon	FALSE	canonical	3	49	junction_5	1285.22781272903	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGTCGGCCAACTCC	NA	False	NA	75	True	AATAAA	-18	NA	100923016	100915158	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ES.9912.32	chr13	-	2333	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-2	7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1180.60080044018	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATTCTCATTTGCCCT	NA	False	NA	-14	True	AATAAA	-20	NA	100922996	100915247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916310_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.34	chr13	-	2273	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	10	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	1226.81344725879	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATTCTCATTTGCCCT	NA	False	NA	-14	True	AATAAA	-20	NA	100922973	100915247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922261_100922412_100922889
ES.9912.35	chr13	-	5207	3	NIC	ENSMUSG00000041431.17	novel	1182	8	NA	NA	-266	7	intron_retention	FALSE	canonical	3	2476	junction_1	521.5	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAATTCTCATTTGCCCT	NA	False	NA	-14	True	AATAAA	-20	NA	100922377	100915247	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100920156_100921964_100922127_100922240
ES.9912.36	chr13	-	2553	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	3	intron_retention	FALSE	canonical	3	2476	junction_5	487.475964870608	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCACAATTCTCATTTG	NA	False	NA	-18	True	AATAAA	-16	NA	100923006	100915251	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.38	chr13	-	2005	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	-60	544	-60	415	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCCCCCAAGTCTCAC	NA	False	NA	0	True	ATTAAA	-17	NA	100923138	100915701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.39	chr13	-	6487	4	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-22	415	intron_retention	FALSE	canonical	3	3519	junction_2	237.410099944285	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCCCCCAAGTCTCAC	NA	False	NA	0	True	ATTAAA	-17	NA	100923016	100915701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100922127_100922240_100922412_100922889
ES.9912.40	chr13	-	3582	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	38	409	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923040	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.43	chr13	-	1798	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-33	409	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_5	1198.12079420232	1562	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923027	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100920062_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.44	chr13	-	4659	5	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-9	409	intron_retention	FALSE	canonical	3	2476	junction_2	629.619875401023	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923003	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.45	chr13	-	5598	6	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-12	409	intron_retention	FALSE	canonical	3	3352	junction_3	275.098091596434	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923006	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917903_100918132_100922127_100922240_100922412_100922889
ES.9912.46	chr13	-	2105	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-9	409	intron_retention	FALSE	canonical	3	2476	junction_5	489.114652057309	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923003	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.47	chr13	-	3779	7	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	409	intron_retention	FALSE	canonical	3	2476	junction_4	514.715698225729	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923007	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.48	chr13	-	1684	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	-12	468	-12	409	multi-exon	FALSE	canonical	3	49	junction_5	1285.22781272903	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATTTGCCCCCAAG	NA	False	NA	-6	True	ATTAAA	-11	NA	100923006	100915707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ES.9912.5	chr13	-	2379	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	34	76	34	6	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTTTGACTGTTTATG	NA	False	NA	0	True	AATAAA	-34	NA	100923044	100915233	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.50	chr13	-	1655	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	-68	902	-68	57	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTTGTTGCTTCTGA	NA	False	NA	7	True	AATAAA	-36	NA	100923146	100916059	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.51	chr13	-	5004	7	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-16	52	intron_retention	FALSE	canonical	3	3352	junction_4	264.617176313254	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGAATGTTGTTGCT	NA	False	NA	2	True	AATAAA	-31	NA	100923010	100916064	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100922127_100922240_100922412_100922889
ES.9912.52	chr13	-	1474	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	3	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1224.82343115243	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATTTGAATGTTGTTG	NA	False	NA	0	True	AATAAA	-29	NA	100922980	100916066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917291_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.53	chr13	-	555	4	NNC	ENSMUSG00000041431.17	novel	1075	5	NA	NA	-12	50	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	1807.70431456278	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATTTGAATGTTGTTG	NA	False	NA	0	True	AATAAA	-29	NA	100923006	100916066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100922930
ES.9912.54	chr13	-	1322	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	-9	827	-9	50	multi-exon	FALSE	canonical	3	49	junction_5	1285.22781272903	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATTTGAATGTTGTTG	NA	False	NA	0	True	AATAAA	-29	NA	100923003	100916066	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ES.9912.55	chr13	-	1420	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	48	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_5	1235.31660288972	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCATTTGAATGTTGT	NA	False	NA	-2	True	AATAAA	-27	NA	100923007	100916068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918205_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.56	chr13	-	4538	4	NIC	ENSMUSG00000041431.17	novel	1182	8	NA	NA	-13	48	intron_retention	FALSE	canonical	3	2476	junction_1	625.335287843427	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCATTTGAATGTTGT	NA	False	NA	-2	True	AATAAA	-27	NA	100923007	100916068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.57	chr13	-	3656	6	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-15	48	intron_retention	FALSE	canonical	3	2476	junction_3	494.090922806724	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCATTTGAATGTTGT	NA	False	NA	-2	True	AATAAA	-27	NA	100923009	100916068	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916641_100917283_100917425_100917665_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.59	chr13	-	1254	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-9	41	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	1218.27539476918	1552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923003	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920022_100922072_100922127_100922240_100922412_100922889
ES.9912.60	chr13	-	3410	7	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	41	intron_retention	FALSE	canonical	3	2476	junction_4	514.715698225729	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923006	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.61	chr13	-	2142	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-12	41	intron_retention	FALSE	canonical	3	2476	junction_5	487.356383869093	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923006	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.63	chr13	-	6336	3	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-9	41	intron_retention	FALSE	canonical	3	3519	junction_1	225	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923003	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100922127_100922240_100922412_100922889
ES.9912.64	chr13	-	6104	4	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-13	41	intron_retention	FALSE	canonical	3	3519	junction_2	237.410099944285	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923007	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100922127_100922240_100922412_100922889
ES.9912.65	chr13	-	5566	4	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-9	41	intron_retention	FALSE	canonical	3	3468	junction_2	218.406857849188	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGCTTAACTCATTTGA	NA	False	NA	-9	True	AATAAA	-20	NA	100923003	100916075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916641_100917283_100917425_100917665_100922412_100922889
ES.9912.69	chr13	-	3180	8	NIC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-13	40	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAGCTTAACTCATTTG	NA	False	NA	-10	True	AATAAA	-19	NA	100923007	100916076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.7	chr13	-	2330	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-9	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1237.16560507274	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCCTTTTGACTGTTT	NA	False	NA	-3	True	AATAAA	-31	NA	100923003	100915236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918283_100919968_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.70	chr13	-	1451	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	71	40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1191.46941185034	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAGCTTAACTCATTTG	NA	False	NA	-10	True	AATAAA	-19	NA	100922839	100916076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922769
ES.9912.71	chr13	-	1517	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-15	40	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1180.60080044018	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAGCTTAACTCATTTG	NA	False	NA	-10	True	AATAAA	-19	NA	100923009	100916076	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916310_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.72	chr13	-	5235	6	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-24	39	intron_retention	FALSE	canonical	3	3352	junction_3	209.707796707705	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATAGCTTAACTCATTT	NA	False	NA	-11	True	AATAAA	-18	NA	100923018	100916077	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916641_100917283_100917425_100917665_100917903_100918132_100922127_100922240_100922412_100922889
ES.9912.73	chr13	-	1488	9	NNC	ENSMUSG00000041431.17	novel	2489	9	NA	NA	-11	36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1237.16560507274	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTACATAGCTTAACTCA	NA	False	NA	-14	True	AATAAA	-15	NA	100923005	100916080	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918283_100919968_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.74	chr13	-	1761	7	ISM	ENSMUSG00000041431.17	ENSMUST00000174038.2	1182	8	-94	505	-10	-505	5prime_fragment	FALSE	canonical	3	2476	junction_4	448.339683969892	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTTATAAAAGCCGCC	NA	False	NA	NA	False	NA	NA	NA	100923004	100916690	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ES.9912.8	chr13	-	1685	7	NNC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	1403.05303020077	1564	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCCCTTTTGACTGTTT	NA	False	NA	-3	True	AATAAA	-31	NA	100923006	100915236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917700_100922072_100922127_100922240_100922412_100922889
ES.9912.9	chr13	-	5837	7	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	-22	2	intron_retention	FALSE	canonical	3	3352	junction_4	264.617176313254	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCCCTTTTGACTGTT	NA	False	NA	-4	True	AATAAA	-30	NA	100923016	100915237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100922127_100922240_100922412_100922889
ES.9913.1	chr13	-	182	1	Intergenic	novelGene_8280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACAGTATTGTAG	NA	False	NA	NA	False	NA	NA	NA	100932941	100932759	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100932800_100932900
ES.9914.1	chr13	-	5382	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-9	-2194	-9	2194	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACAGAGTTTCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	100969944	100936961	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.10	chr13	-	3115	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-2	1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	70.6039904636257	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAAATGAATAATTG	NA	False	NA	-3	True	AATAAA	-20	NA	100969937	100939154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100965407_100965531_100969608
ES.9914.11	chr13	-	3028	14	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	72.6867315728638	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969937	100939155	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100965407_100965531_100969608
ES.9914.12	chr13	-	3274	17	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-1	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	88.9666150516586	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969936	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100959642_100959738_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.13	chr13	-	3799	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	3	-1	intron_retention	FALSE	canonical	3	198	junction_13	28.8362725095477	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969932	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.14	chr13	-	3066	17	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.7220906820844	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969868	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950328_100950919_100951027_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.15	chr13	-	3261	17	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	20	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	88.7220906820844	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969915	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100950923_100951027_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.16	chr13	-	2999	16	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	12	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	67.1351538978566	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969923	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949972_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.17	chr13	-	3658	15	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	8	-1	intron_retention	FALSE	canonical	3	6	junction_4	70.4279918840253	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969927	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945784_100947813_100947944_100949155_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.18	chr13	-	3352	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	4	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	106.942352071883	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	False	NA	-5	True	AATAAA	-18	NA	100969931	100939156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100955586_100955832_100957626_100957715_100961423_100961510_100965407_100965531_100969608
ES.9914.19	chr13	-	3187	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	105.872124124656	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTATTTGCAAATGAATAA	NA	False	NA	-6	True	AATAAA	-17	NA	100969927	100939157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100955586_100955832_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.2	chr13	-	4080	18	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-8	1317	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	86.9844674516932	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGATGTTTGAGCAGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	100969856	100937838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100938213_100938409_100938831_100938970_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.20	chr13	-	5481	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	149	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	70.0293271898757	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTATTTGCAAATGAATAA	NA	False	NA	-6	True	AATAAA	-17	NA	100969699	100939157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100967068
ES.9914.21	chr13	-	5768	14	NNC	ENSMUSG00000021629.11	novel	2722	15	NA	NA	184	-2	intron_retention	FALSE	canonical	3	6	junction_4	71.1012279456875	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTATTTGCAAATGAATAA	NA	False	NA	-6	True	AATAAA	-17	NA	100969664	100939157	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945784_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.22	chr13	-	3173	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	69.7585040614325	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGTATTTGCAAATGAAT	NA	False	NA	-8	True	AATAAA	-15	NA	100969939	100939159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940493_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.24	chr13	-	3170	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	18	4	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	68.4376114915378	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAGTATTTGCAAATGAA	NA	False	NA	-9	True	AATAAA	-14	NA	100969917	100939160	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961409_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.25	chr13	-	6009	11	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	11683	10	2805	-1	intron_retention	FALSE	canonical	3	232	junction_10	23.6381048309715	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGGTAGTATTTGCAA	NA	False	NA	-14	True	AATAAA	-9	NA	100958252	100939165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633
ES.9914.26	chr13	-	2567	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	192	-1	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	101.83638293306	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGGTAGTATTTGCAA	NA	False	NA	-14	True	AATAAA	-9	NA	100969656	100939165	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945784_100947813_100947944_100949155_100949314_100949972_100950015_100950190_100950328_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.27	chr13	-	3144	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-30	65	-30	-56	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGTTCTTGGTGTATTT	NA	False	NA	-69	True	GATAAA	-18	NA	100969965	100939220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.29	chr13	-	2818	14	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	11	14	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.0134767137538	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTAATTTCTAATTATA	NA	False	NA	14	True	AATAAA	-29	NA	100969924	100939340	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.3	chr13	-	4177	18	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-23	1313	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	100.882061395566	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGAGAGATGTTTGAGC	NA	False	NA	NA	False	ATTAAA	-15	NA	100969958	100937842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100938212_100938409_100938783_100938924_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950482_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.30	chr13	-	3060	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-70	189	-70	10	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAAACTAATTTCTAAT	NA	False	NA	10	True	AATAAA	-25	NA	100970005	100939344	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.31	chr13	-	2736	13	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	75.8587869370158	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTGTATATAAAACTAA	NA	False	NA	2	True	AATAAA	-17	NA	100969942	100939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.32	chr13	-	2932	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-38	2	combination_of_known_splicesites	FALSE	canonical	1	9	junction_11	70.1332914629605	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTGTATATAAAACTAA	NA	False	NA	2	True	AATAAA	-17	NA	100969973	100939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.33	chr13	-	4023	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-1	2	intron_retention	FALSE	canonical	3	198	junction_13	28.5361389204951	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTGTATATAAAACTAA	NA	False	NA	2	True	AATAAA	-17	NA	100969936	100939352	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.34	chr13	-	2797	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	71.9698420400191	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTGTATATAAAACT	NA	False	NA	0	True	AATAAA	-15	NA	100969948	100939354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.35	chr13	-	3011	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	68.4376114915378	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTGTATATAAAACT	NA	False	NA	0	True	AATAAA	-15	NA	100969952	100939354	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961409_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.38	chr13	-	2852	14	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-27	-2	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	72.6867315728638	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTCTGTATATAAAA	NA	False	NA	-2	True	AATAAA	-13	NA	100969962	100939356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100965407_100965531_100969608
ES.9914.39	chr13	-	3999	3	FSM	ENSMUSG00000021629.11	ENSMUST00000225129.2	589	3	-2827	-583	-2827	-2	multi-exon	FALSE	canonical	3	263	junction_2	22.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTCTGTATATAAAA	631	False	NA	-2	True	AATAAA	-13	NA	100946298	100939356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041
ES.9914.4	chr13	-	176	1	Intergenic	novelGene_8281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	8522	False	NA	NA	False	NA	NA	NA	100938407	100938231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100938200_100938400
ES.9914.42	chr13	-	2707	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-2	474	-2	-275	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAAATTGTCGCTCT	NA	False	NA	NA	False	AAGAAA	-29	NA	100969937	100939629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.43	chr13	-	2679	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	12	-275	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	69.8886733789293	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAAATTGTCGCTCT	NA	False	NA	NA	False	AAGAAA	-29	NA	100969923	100939629	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949169_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.44	chr13	-	2358	14	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-12	3776	-12	-2992	5prime_fragment	FALSE	canonical	3	198	junction_12	26.578008438263	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAATAGATCCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	100969947	100942931	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.45	chr13	-	3165	12	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-21	-7673	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.0032845250392	254	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATTTGAGGTTTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	100969956	100947612	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100949074_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.46	chr13	-	175	1	FSM	ENSMUSG00000021629.11	ENSMUST00000224177.2	4000	1	3555	270	3555	-270	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	100957502	100957327	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100957300_100957500
ES.9914.5	chr13	-	3323	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	-95	-49	-95	49	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGTTACCCCCTGTCA	NA	False	NA	45	True	AGTAAA	-18	NA	100970030	100939106	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.6	chr13	-	4631	14	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-27	15	intron_retention	FALSE	canonical	3	10	junction_6	71.2715450659986	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTGGTTACAGTAAAGAA	NA	False	NA	11	True	AATAAA	-34	NA	100969875	100939140	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949972_100950015_100950190_100951275_100953516_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.7	chr13	-	2825	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	92.1322253002472	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGCAAATGAATAATTGG	NA	False	NA	-2	True	AATAAA	-21	NA	100969942	100939153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100947813_100947944_100949155_100949314_100949972_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9914.8	chr13	-	4619	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	12	2	intron_retention	FALSE	canonical	3	198	junction_13	27.1973137929285	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGCAAATGAATAATTGG	NA	False	NA	-2	True	AATAAA	-21	NA	100969923	100939153	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100963027_100965407_100965531_100969608
ES.9914.9	chr13	-	3025	16	NNC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	67.0666003975816	265	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAAATGAATAATTG	NA	False	NA	-3	True	AATAAA	-20	NA	100969932	100939154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950328_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ES.9915.1	chr13	+	137	1	Intergenic	novelGene_8283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAAATTAATTA	NA	False	NA	NA	False	NA	NA	NA	100977659	100977796	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_100977700_100977800
ES.9916.1	chr13	-	180	1	Intergenic	novelGene_8284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCTTTTAAAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	100978097	100977917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_100977900_100978100
ES.9917.1	chr13	-	99	1	Intergenic	novelGene_8285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTGGATTTTTTTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	101082701	101082602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_101082600_101082700
ES.9918.1	chr13	-	176	1	Intergenic	novelGene_8286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATTAATG	NA	False	NA	NA	False	NA	NA	NA	101293903	101293727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_101293700_101293900
ES.9919.1	chr13	+	173	1	Intergenic	novelGene_8287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGTACTC	5692	False	NA	NA	False	NA	NA	NA	101539134	101539307	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_101539100_101539300
ES.992.1	chr1	-	2043	1	Antisense	novelGene_ENSMUSG00000055013.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	89824414	89822371	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr1_-_89822400_89824400
ES.9920.1	chr13	+	3995	4	Antisense	novelGene_ENSMUSG00000041417.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGTATATCAGAACGCAG	NA	False	NA	NA	False	NA	NA	NA	101825154	101829684	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_101825266_101825485_101825670_101825908_101826376_101826451
ES.9921.1	chr13	+	992	1	Intergenic	novelGene_8288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGAGTGATCTCTTGGT	NA	False	NA	NA	False	NA	NA	NA	101895206	101896198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_101895200_101896200
ES.9922.1	chr13	-	6857	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	58	198	54	-198	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCATTTGAAATTTTAG	NA	False	NA	-11	True	AATAAA	-21	NA	101904667	101817268	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ES.9922.2	chr13	-	4033	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-17	3097	-17	4	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGAGTCCAACAGTG	NA	False	NA	NA	False	AATAAA	-36	NA	101904742	101820167	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ES.9922.3	chr13	-	3715	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-2	3400	-2	-299	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGTTTTTGTTGCTTGA	NA	False	NA	NA	False	AATACA	-23	NA	101904727	101820470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ES.9922.4	chr13	-	3622	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	-20	3511	-20	-410	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTCTGTTTTGTTTTGC	NA	False	NA	NA	False	AATAGA	-22	NA	101904745	101820581	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ES.9922.5	chr13	-	3631	17	NNC	ENSMUSG00000041417.16	novel	7113	16	NA	NA	0	-413	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	9.80254271860113	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGCTTCTGTTTTGTTT	NA	False	NA	NA	False	AATAGA	-19	NA	101904721	101820584	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101830883_101830920_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ES.9922.6	chr13	-	4767	3	Fusion	ENSMUSG00000104214.2_ENSMUSG00000041417.16	novel	2706	2	NA	NA	27	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAGTTCAATATT	NA	False	NA	NA	False	AATAAA	-11	NA	101904694	101886227	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_101890071_101893833_101894548_101904484
ES.9923.1	chr13	+	158	1	Intergenic	novelGene_8289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGTCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	102834389	102834547	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_102834400_102834500
ES.9924.1	chr13	+	2864	3	NNC	ENSMUSG00000021624.10	novel	2650	3	NA	NA	5024	136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTAGTCACCTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	102835142	102843599	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_102835602_102839208_102839376_102841361
ES.9925.1	chr13	+	1940	1	Antisense	novelGene_ENSMUSG00000034751.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTGTGGCAGCCAGAG	NA	False	NA	NA	False	NA	NA	NA	102909198	102911138	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_102909200_102911100
ES.9926.1	chr13	+	171	1	Intergenic	novelGene_8290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACAAAAAACGGGA	NA	False	NA	NA	False	NA	NA	NA	102924254	102924425	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_102924300_102924400
ES.9927.1	chr13	-	4682	2	NNC	ENSMUSG00000034751.18	novel	5968	27	NA	NA	37213	3367	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTCGTTCTATCGTG	NA	False	NA	NA	False	NA	NA	NA	102870364	102865626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_102866397_102866452
ES.9927.2	chr13	-	9954	25	NIC	ENSMUSG00000034751.18	novel	7647	26	NA	NA	6	-2	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	3.81312608702565	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGACTTGCGTGTTTCTTC	4553	False	NA	-1	True	AATAAA	-15	NA	103042608	102868995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_102875406_102875705_102875888_102878453_102878591_102887021_102887145_102887888_102888119_102895009_102895246_102895530_102895659_102897467_102897581_102897802_102897926_102904378_102904481_102906276_102906443_102907230_102907364_102908962_102909102_102910693_102910903_102917667_102917754_102919852_102919921_102923824_102923958_102925470_102925573_102930476_102930687_102932593_102932670_102934553_102934712_102941149_102941229_102947008_102947079_102990338_102990428_103042156
ES.9927.3	chr13	-	6844	7	NNC	ENSMUSG00000034751.18	novel	636	8	NA	NA	-31	6160	intron_retention	FALSE	canonical	0	0	junction_6	7.03364928200306	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAACAGTAAACCCATTT	4516	False	NA	NA	False	AATAAA	-10	NA	103042645	102924475	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_102930687_102932593_102932670_102934553_102934712_102941149_102941229_102947008_102947079_102990338_102990428_103042484
ES.9927.4	chr13	-	134	1	Intergenic	novelGene_8291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACACCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102938422	102938288	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_102938300_102938400
ES.9928.1	chr13	-	161	1	Intergenic	novelGene_8292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103223276	103223115	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_103223100_103223300
ES.9929.1	chr13	-	3048	1	Intergenic	novelGene_8293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103403423	103400375	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_103400400_103403400
ES.993.1	chr1	+	198	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACTTGTGTGTCTCGTGT	NA	False	NA	17	True	NA	NA	NA	89843857	89844055	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89843900_89844100
ES.9930.1	chr13	+	3036	1	Intergenic	novelGene_8294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTCAAGGTACCTTGGG	NA	False	NA	NA	False	AATAAA	-33	NA	103459447	103462483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_103459400_103462500
ES.9931.1	chr13	+	2982	7	Antisense	novelGene_ENSMUSG00000032621.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	NA	False	NA	NA	False	TTTAAA	-37	NA	103887561	103901012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_103889210_103889531_103889652_103894692_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ES.9931.2	chr13	+	2532	6	Antisense	novelGene_ENSMUSG00000032621.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAAATATGTGCGAA	NA	False	NA	NA	False	NA	NA	NA	103888956	103901089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_103889210_103889531_103889652_103894692_103895808_103896923_103897103_103897537_103897703_103900389
ES.9932.1	chr13	-	5140	1	Intergenic	novelGene_8295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCATGCACAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	103873676	103868536	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_103868500_103873700
ES.9932.10	chr13	-	4548	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	92	817	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	64.1452380948729	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	10011	False	NA	2	True	AATAAA	-22	NA	103911022	103877302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.11	chr13	-	8069	11	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	108	817	intron_retention	FALSE	canonical	0	0	junction_5	86.8021313102392	345	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	9577	False	NA	2	True	AATAAA	-22	NA	103911006	103877302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894807_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.12	chr13	-	4740	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	87	815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	82.2652805798952	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTTTATTTTTTTGG	10006	False	NA	0	True	AATAAA	-20	NA	103911027	103877304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103909336_103909417_103910806
ES.9932.13	chr13	-	10167	11	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	78	815	intron_retention	FALSE	canonical	1	3	junction_6	68.4312793976556	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGTTTATTTTTTTGG	9997	False	NA	0	True	AATAAA	-20	NA	103911036	103877304	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894997_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103905959_103910806
ES.9932.15	chr13	-	4864	13	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	3	811	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	75.6025793210787	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGATGGTTTATTTTT	9997	False	NA	-4	True	AATAAA	-16	NA	103911111	103877308	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.16	chr13	-	3973	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	-34	-5	-34	5	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTCTATTCCGCTCT	9999	False	NA	8	True	AATAAA	-26	NA	103911150	103878114	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.17	chr13	-	8252	5	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	4459	0	intron_retention	FALSE	canonical	3	193	junction_2	19.5448202856921	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	2954	False	NA	3	True	AATAAA	-21	NA	103896631	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693
ES.9932.18	chr13	-	3972	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	95.7225674402613	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	10000	False	NA	3	True	AATAAA	-21	NA	103911070	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888896_103889211_103889532_103889653_103894693_103894997_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.19	chr13	-	3988	13	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	68	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	75.6025793210787	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9987	False	NA	3	True	AATAAA	-21	NA	103911046	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.2	chr13	-	8651	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	111	-4828	109	2564	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGATGATTTTTTT	9578	False	NA	NA	False	TTTAAA	-5	NA	103911005	103873291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.20	chr13	-	7368	11	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	103	0	intron_retention	FALSE	canonical	3	167	junction_9	24.8694591818962	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9572	False	NA	3	True	AATAAA	-21	NA	103911011	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.21	chr13	-	4869	10	FSM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	-803	2264	-352	0	multi-exon	FALSE	canonical	3	148	junction_3	29.6177290915966	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9959	False	NA	3	True	AATAAA	-21	NA	103901893	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ES.9932.22	chr13	-	3837	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	82.2652805798952	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9644	False	NA	3	True	AATAAA	-21	NA	103910939	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103909336_103909417_103910806
ES.9932.23	chr13	-	4842	4	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	2032	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	97.410927974683	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	NA	False	NA	3	True	AATAAA	-21	NA	103888140	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103885644
ES.9932.24	chr13	-	3952	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	80.024822537899	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9989	False	NA	3	True	AATAAA	-21	NA	103911044	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103891281_103891372_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.25	chr13	-	3924	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	65.4228458593065	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9992	False	NA	3	True	AATAAA	-21	NA	103911116	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888911_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.27	chr13	-	3854	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	66.1489678711106	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9991	False	NA	3	True	AATAAA	-21	NA	103911042	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897097_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.28	chr13	-	7486	12	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	109	0	intron_retention	FALSE	canonical	3	14	junction_10	78.3779780168928	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9578	False	NA	3	True	AATAAA	-21	NA	103911005	103878119	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.3	chr13	-	7842	6	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	67	2562	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	80.2969488835037	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTGATGATTTTT	9986	False	NA	NA	False	TTTAAA	-3	NA	103911047	103873293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103910806
ES.9932.30	chr13	-	3301	10	NNC	ENSMUSG00000032621.9	novel	6330	10	NA	NA	654	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	70.543043510004	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTTCAGTTTCTATT	9404	False	NA	1	True	AATAAA	-19	NA	103900436	103878121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389
ES.9932.31	chr13	-	3862	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	58	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	62.1596185784484	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTCTTCAGTTTCTAT	9977	False	NA	0	True	AATAAA	-18	NA	103911056	103878122	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900398_103900515_103905824_103905959_103910806
ES.9932.34	chr13	-	3817	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	34	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	63.6040267767869	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCTTCAGTTTCTA	9990	False	NA	-1	True	AATAAA	-17	NA	103911080	103878123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905854_103905930_103905959_103910806
ES.9932.35	chr13	-	3952	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	-28	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.4921675044457	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCTTCAGTTTCTA	10005	False	NA	-1	True	AATAAA	-17	NA	103911144	103878123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889647_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.38	chr13	-	3615	4	NNC	ENSMUSG00000032621.9	novel	619	3	NA	NA	-1265	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	98.8140790688363	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCTTCAGTTTCT	NA	False	NA	-2	True	AATAAA	-16	NA	103886899	103878124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885382_103885644
ES.9932.39	chr13	-	6359	15	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	72	-5	intron_retention	FALSE	canonical	0	0	junction_1	103.325323367409	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCTTCAGTTTCT	9991	False	NA	-2	True	AATAAA	-16	NA	103911042	103878124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103879605_103880142_103880225_103881292_103881438_103885266_103885363_103886082_103886104_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900398_103900515_103900803_103900928_103902918_103905959_103910806
ES.9932.4	chr13	-	8481	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	122	-4669	120	2405	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTCTTTAGTTTCATT	9589	False	NA	NA	False	NA	NA	NA	103910994	103873450	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.40	chr13	-	7647	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	122	-5	intron_retention	FALSE	canonical	1	3	junction_5	97.5327027164405	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCTTCAGTTTCT	9591	False	NA	-2	True	AATAAA	-16	NA	103910992	103878124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894997_103895676_103895808_103896923_103897103_103897537_103897703_103900398_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.41	chr13	-	8878	12	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	70	-5	intron_retention	FALSE	canonical	3	26	junction_10	59.5961616158192	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCTTCAGTTTCT	9989	False	NA	-2	True	AATAAA	-16	NA	103911044	103878124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103905959_103910806
ES.9932.42	chr13	-	3888	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	68	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	89.9707900129567	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGAGTCTTCAGTTTCT	9987	False	NA	-2	True	AATAAA	-16	NA	103911046	103878124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910901
ES.9932.43	chr13	-	5152	10	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	-1	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	72.2702404473722	340	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAAGAGTCTTCAGTTT	5995	False	NA	-4	True	AATAAA	-14	NA	103905857	103878126	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103887352_103889576_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824
ES.9932.44	chr13	-	4050	14	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	72	-14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	96.5513016284806	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAGCGGAAAGAGTCT	9991	False	NA	-11	True	AATAAA	-7	NA	103911042	103878133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103909336_103909417_103910806
ES.9932.45	chr13	-	3601	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	105	-131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	66.678456257817	341	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTGTTAAGGAGTGTCT	9574	False	NA	-91	True	AATAAA	-38	NA	103911009	103878250	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910901
ES.9932.46	chr13	-	3774	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	10	150	8	-150	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTGGACCTGTGGAG	10002	False	NA	-110	True	AATAAA	-19	NA	103911106	103878269	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.47	chr13	-	3081	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	103	750	101	-750	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGTTTAATGATAG	9570	False	NA	NA	False	ATTAAA	-28	NA	103911013	103878869	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.48	chr13	-	3230	14	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	-9	-760	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	86.6787580701968	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATGGTAAATTTGTGT	10024	False	NA	NA	False	ATTAAA	-18	NA	103911125	103878879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905854_103905930_103905959_103910806
ES.9932.49	chr13	-	3134	13	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	68	-854	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	75.6025793210787	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTATGAGTTGACTTCA	9987	False	NA	NA	False	ATTAAA	-30	NA	103911046	103878973	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.5	chr13	-	6118	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	80	-2264	78	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAGTAGTAATTTCAT	9997	False	NA	NA	False	AATAAA	-20	NA	103911036	103875855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.50	chr13	-	4938	11	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	6	-859	intron_retention	FALSE	canonical	3	26	junction_10	62.5047998156942	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATGCCTATGAGTTGA	8742	False	NA	NA	False	ATTAAA	-25	NA	103903110	103878978	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803
ES.9932.51	chr13	-	2762	13	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	-17	686	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	75.6025793210787	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATAACGTATTCAGTG	10016	False	NA	NA	False	NA	NA	NA	103911133	103879432	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.52	chr13	-	2486	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	97	1351	95	648	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACTGTTCTTCCGAAG	10014	False	NA	NA	False	ATTAAA	-17	NA	103911019	103879470	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.53	chr13	-	5630	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	98	647	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	83.0203599443489	326	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTACTGTTCTTCCGAA	10017	False	NA	NA	False	ATTAAA	-16	NA	103911016	103879471	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103885644_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.54	chr13	-	4103	3	FSM	ENSMUSG00000032621.9	ENSMUST00000210269.2	619	3	-2923	-561	1615	561	multi-exon	FALSE	canonical	3	193	junction_2	15	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTTGGACATGAGT	NA	False	NA	NA	False	NA	NA	NA	103888557	103879557	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266
ES.9932.55	chr13	-	2422	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	1	1511	-1	488	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTTTCACGTTGACT	9993	False	NA	NA	False	AATATA	-30	NA	103911115	103879630	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.56	chr13	-	2440	13	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	95	478	combination_of_known_splicesites	FALSE	canonical	3	14	junction_11	75.6025793210787	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGATGTAAGACGTTTT	10014	False	NA	NA	False	AATATA	-20	NA	103911019	103879640	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.57	chr13	-	5780	11	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	128	436	intron_retention	FALSE	canonical	3	167	junction_9	24.8694591818962	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAAATTTGTGCAAAT	9597	False	NA	NA	False	AATATA	-16	NA	103910986	103879682	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.58	chr13	-	2214	13	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	98	430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	92.9409534776426	320	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTGCTTGAAATTTGT	10017	False	NA	NA	False	AATATA	-10	NA	103911016	103879688	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103885644_103885703_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.59	chr13	-	13130	9	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	133	417	intron_retention	FALSE	canonical	0	0	junction_7	98.1414795079023	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACAGTTTGATGATGT	9602	False	NA	NA	False	TTTAAA	-17	NA	103910981	103879701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103897103_103897537_103897703_103900389_103905959_103909336_103909417_103910806
ES.9932.6	chr13	-	9584	11	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	139	0	intron_retention	FALSE	canonical	0	0	junction_9	68.0796592235889	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAGTAGTAATTTCAT	9608	False	NA	NA	False	AATAAA	-20	NA	103910975	103875855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900503_103905824_103905959_103910806
ES.9932.60	chr13	-	3707	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	0	8663	0	2193	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	9992	False	NA	NA	False	NA	NA	NA	103911116	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.62	chr13	-	5680	8	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	133	2193	intron_retention	FALSE	canonical	3	14	junction_6	93.90094650802	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	9602	False	NA	NA	False	NA	NA	NA	103910981	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103889211_103889532_103889653_103894693_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.63	chr13	-	4197	8	NNC	ENSMUSG00000032621.9	novel	1392	9	NA	NA	-305	2193	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	96.281899034204	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	7994	False	NA	NA	False	NA	NA	NA	103901846	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103900803
ES.9932.64	chr13	-	3475	9	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	121	2193	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	72.8092542195015	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	9590	False	NA	NA	False	NA	NA	NA	103910993	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.65	chr13	-	3702	10	NIC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	127	2193	combination_of_known_splicesites	FALSE	canonical	3	14	junction_8	85.2304066763865	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	9596	False	NA	NA	False	NA	NA	NA	103910987	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.66	chr13	-	4172	6	NIC	ENSMUSG00000032621.9	novel	2085	7	NA	NA	535	2193	intron_retention	FALSE	canonical	3	201	junction_1	21.0751037957112	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTATCAATTGAGCG	9285	False	NA	NA	False	NA	NA	NA	103900555	103886782	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103889211_103889532_103889653_103894693_103895808_103896923_103897103_103897537_103897703_103900389
ES.9932.67	chr13	-	5700	3	NNC	ENSMUSG00000032621.9	novel	690	2	NA	NA	-3368	2189	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	100.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAATCTTTATCAATTG	6045	False	NA	NA	False	NA	NA	NA	103893540	103886786	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103889211_103889532_103892704_103893435
ES.9932.68	chr13	-	7624	7	ISM	ENSMUSG00000032621.9	ENSMUST00000210643.2	1392	9	-1790	-2162	-230	2162	intron_retention	FALSE	canonical	3	201	junction_1	20.1197802064425	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	6946	False	NA	NA	False	NA	NA	NA	103904906	103886813	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ES.9932.7	chr13	-	6015	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	66.678456257817	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAGTAGTAATTTCAT	10005	False	NA	NA	False	AATAAA	-20	NA	103911028	103875855	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910901
ES.9932.70	chr13	-	3150	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	93	9127	91	1729	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCCTTTTATGTT	10010	False	NA	NA	False	NA	NA	NA	103911023	103887246	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.71	chr13	-	3230	10	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	23	1726	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	98.3440672107655	294	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCCTGGCTCCTTTTAT	9979	False	NA	NA	False	NA	NA	NA	103911091	103887249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103900803_103900928_103905824_103905959_103910806
ES.9932.72	chr13	-	4845	7	ISM	ENSMUSG00000032621.9	ENSMUST00000210643.2	1392	9	-54	-1119	-54	1119	intron_retention	FALSE	canonical	3	201	junction_1	20.1197802064425	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAGTGTTCATTGGA	8682	False	NA	NA	False	AATAAA	-5	NA	103903170	103887856	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ES.9932.73	chr13	-	2502	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	114	9754	112	1102	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAATAAAAAGCTAA	9581	False	NA	NA	False	NA	NA	NA	103911002	103887873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.74	chr13	-	2434	9	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	71	1102	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	72.8092542195015	292	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAATAAAAAGCTAA	9990	False	NA	NA	False	NA	NA	NA	103911043	103887873	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.75	chr13	-	1749	9	ISM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	31	10590	29	266	5prime_fragment	FALSE	canonical	3	167	junction_7	26.6760074786314	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGTTTCTGTTAATC	9985	False	NA	NA	False	NA	NA	NA	103911085	103888709	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9932.8	chr13	-	4969	7	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	4152	1447	4152	817	intron_retention	FALSE	canonical	3	148	junction_3	29.4189092629591	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	2647	False	NA	2	True	AATAAA	-22	NA	103896938	103877302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676
ES.9932.9	chr13	-	4681	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	70	-817	68	817	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	9987	False	NA	2	True	AATAAA	-22	NA	103911046	103877302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ES.9933.1	chr13	-	6936	25	NIC	ENSMUSG00000021709.15	novel	6369	26	NA	NA	-683	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	18.2493816485807	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTGTTGCCTTTATT	NA	False	NA	0	True	NA	NA	NA	104057705	103955293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961357_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.11	chr13	-	2320	4	NIC	ENSMUSG00000021709.15	novel	5084	24	NA	NA	49851	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	42.928881756795	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGTCTTGGTGTTGCCTT	NA	False	NA	-4	True	NA	NA	NA	103975949	103955297	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103975814
ES.9933.13	chr13	-	6988	25	NIC	ENSMUSG00000021709.15	novel	6224	26	NA	NA	-662	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	17.3060181407766	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	104057684	103955298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.14	chr13	-	7844	5	ISM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	86936	0	55933	0	3prime_fragment	FALSE	canonical	3	45	junction_4	21.8674987138447	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	103969867	103955298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414
ES.9933.17	chr13	-	3901	7	NNC	ENSMUSG00000021709.15	novel	6103	25	NA	NA	48072	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	33.8509806193098	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	103977728	103955298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103970210_103970274_103971537_103975814_103975999_103977661
ES.9933.18	chr13	-	6435	25	NIC	ENSMUSG00000021709.15	novel	6224	26	NA	NA	-199	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.1565190528505	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	104057221	103955298	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.19	chr13	-	6322	9	ISM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	72833	-814	41830	-2	3prime_fragment	FALSE	canonical	3	24	junction_3	20.9638826318027	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	8877	False	NA	-7	True	NA	NA	NA	103983970	103955300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011
ES.9933.2	chr13	-	7188	26	FSM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	-959	-5	-740	1	multi-exon	FALSE	canonical	3	35	junction_5	14.0566852422611	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTGTTGCCTTTATT	NA	False	NA	0	True	NA	NA	NA	104057762	103955293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.22	chr13	-	7916	21	NIC	ENSMUSG00000021709.15	novel	5084	24	NA	NA	3026	-2	intron_retention	FALSE	canonical	3	24	junction_3	14.2863571283935	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	False	NA	-7	True	NA	NA	NA	104022774	103955300	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648
ES.9933.24	chr13	-	3854	3	ISM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	64212	4	64212	-4	intron_retention	FALSE	canonical	3	89	junction_2	2	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCGAGTCTTGGTGTT	NA	False	NA	-9	True	NA	NA	NA	103961588	103955302	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103957315_103959318_103959394_103959821
ES.9933.25	chr13	-	6401	25	NNC	ENSMUSG00000021709.15	novel	6369	26	NA	NA	-192	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	24.0978546186631	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTTTAATGCGAGTCT	NA	False	NA	-16	True	NA	NA	NA	104057214	103955309	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_103999387_103999489_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.26	chr13	-	2311	4	ISM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	85673	182	54670	-182	3prime_fragment	FALSE	canonical	3	24	junction_3	31.6262900483478	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTTTAAGTTTTGTGT	NA	False	NA	NA	False	ACTAAA	-3	NA	103971130	103956296	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005
ES.9933.27	chr13	-	4438	22	ISM	ENSMUSG00000021709.15	ENSMUST00000022222.12	6369	26	-235	8969	-235	-8149	5prime_fragment	FALSE	canonical	3	35	junction_1	11.9943297260927	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGTTTCCCAGTTTG	NA	False	NA	NA	False	CATAAA	-18	NA	104057257	103964263	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.29	chr13	-	7496	21	ISM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	-853	10964	-634	-10964	5prime_fragment	FALSE	canonical	3	58	junction_12	9.19932062708981	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCCTTTATTCTTGAA	NA	False	NA	NA	False	AATAAA	-20	NA	104057656	103967078	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.3	chr13	-	6916	26	NNC	ENSMUSG00000021709.15	novel	6224	26	NA	NA	-522	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_24	25.1904743901341	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTGTTGCCTTTATT	NA	False	NA	0	True	NA	NA	NA	104057544	103955293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104029924_104029988_104056753
ES.9933.30	chr13	-	5532	1	NIC	ENSMUSG00000021709.15	novel	6369	26	NA	NA	34195	-7386	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAAATGTTATCTTCTG	1242	False	NA	NA	False	NA	NA	NA	103991605	103986073	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103986100_103991600
ES.9933.31	chr13	-	2057	4	ISM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	31288	30777	31288	-7388	intron_retention	FALSE	canonical	3	62	junction_2	4.08248290463863	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAAAATGTTATCTTC	NA	False	NA	NA	False	NA	NA	NA	103994512	103986075	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103987353_103991326_103991397_103993502_103993619_103993918
ES.9933.4	chr13	-	7221	27	NNC	ENSMUSG00000021709.15	novel	5552	27	NA	NA	-662	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_20	23.146561593668	178	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTGTTGCCTTTAT	NA	False	NA	-1	True	NA	NA	NA	104057684	103955294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104001225_104001338_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.5	chr13	-	7560	4	ISM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	59201	-4	59201	0	intron_retention	FALSE	canonical	3	50	junction_3	19.3964487013015	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTGTTGCCTTTAT	NA	False	NA	-1	True	NA	NA	NA	103966599	103955294	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227
ES.9933.6	chr13	-	7129	27	NIC	ENSMUSG00000021709.15	novel	5552	27	NA	NA	-617	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	25.0215587517417	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGGTGTTGCCTTTA	NA	False	NA	-2	True	NA	NA	NA	104057639	103955295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961357_103964414_103964532_103966695_103966840_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.8	chr13	-	7626	26	FSM	ENSMUSG00000021709.15	ENSMUST00000022222.12	6369	26	-1258	1	-1258	-1	multi-exon	FALSE	canonical	3	5	junction_4	18.4440342658541	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGGTGTTGCCTTTA	NA	False	NA	-2	True	NA	NA	NA	104058280	103955295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961357_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9933.9	chr13	-	7242	27	FSM	ENSMUSG00000021709.15	ENSMUST00000191275.7	5552	27	-871	-819	-652	-1	multi-exon	FALSE	canonical	0	0	junction_5	22.3880845844603	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTGGTGTTGCCTTTA	NA	False	NA	-2	True	NA	NA	NA	104057674	103955295	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103966695_103966840_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ES.9934.1	chr13	+	160	1	Intergenic	novelGene_8296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	104121237	104121397	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_104121200_104121400
ES.9935.1	chr13	+	3859	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	-50	-761	-50	761	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTGACTTATATT	NA	False	NA	NA	False	AATAAA	-25	NA	104246198	104279004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.10	chr13	+	3026	1	Genic_Genomic	ENSMUSG00000042743.14	novel	NA	NA	NA	NA	30417	1536	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	22	True	NA	NA	NA	104276753	104279779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_104276800_104279800
ES.9935.2	chr13	+	1698	11	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	10	609	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	23.9893726470702	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGTCTGTAGCTTCGT	NA	False	NA	NA	False	TTTAAA	-3	NA	104246258	104276915	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268572_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.4	chr13	+	3780	11	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	13	757	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_7	23.9893726470702	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	AATAAA	-21	NA	104246261	104279000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268572_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.5	chr13	+	3812	11	NIC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-15	757	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	23.8086118872983	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	AATAAA	-21	NA	104246265	104279000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104246502_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.6	chr13	+	3906	12	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-15	757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	34.6577123421813	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	AATAAA	-21	NA	104246265	104279000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104246502_104247577_104247698_104254236_104254343_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268572_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.7	chr13	+	3684	10	FSM	ENSMUSG00000042743.14	ENSMUST00000159574.2	919	10	-70	-2695	-14	758	multi-exon	FALSE	canonical	0	0	junction_2	25.9657894588673	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTTGTCTTTGACTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	104246266	104279001	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104246478_104247577_104247698_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.8	chr13	+	3991	11	NNC	ENSMUSG00000042743.14	novel	3048	11	NA	NA	-27	757	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	26.2238441118002	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTTTGTCTTTGACTTA	NA	False	NA	NA	False	AATAAA	-21	NA	104246309	104279000	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104266089_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ES.9935.9	chr13	+	723	5	ISM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	65	17281	-23	-7533	5prime_fragment	FALSE	canonical	3	62	junction_2	11.9869720947369	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTTTAATTTCTT	NA	False	NA	NA	False	AATAAA	-31	NA	104246313	104260962	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697
ES.9936.1	chr13	+	3340	12	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-908	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	98.2847944823933	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAGACTTTGAATTG	NA	False	NA	2	True	AATAAA	-13	NA	104314396	104339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104314520_104315186_104315323_104317581_104317745_104321233_104321356_104323910_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.10	chr13	+	2967	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	9	-161	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	69.173069761627	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGAATTGTTTTCTG	NA	False	NA	9	True	AATAAA	-20	NA	104315313	104339364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.11	chr13	+	4201	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	10	-795	10	440	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	104315314	104340320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.12	chr13	+	4061	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-20	433	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.7606770667212	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTTATTTATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	104315326	104340313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326391_104328524_104328660_104334497_104334628_104335101_104335213_104337738
ES.9936.14	chr13	+	2694	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-2	412	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.9410382550756	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTATTTGTAAAAGATAC	NA	False	NA	NA	False	AATAAA	-22	NA	104315344	104338968	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104337738
ES.9936.15	chr13	+	3428	12	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-2	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	87.5655126648869	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGACTGTGACGTA	NA	False	NA	9	True	AATATA	-23	NA	104315344	104339523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104315470_104317581_104317745_104320495_104320550_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.16	chr13	+	3654	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-2	48	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.9410382550756	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCTAGTTAACAATTT	NA	False	NA	50	True	AATAAA	-14	NA	104315344	104339928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104337738
ES.9936.17	chr13	+	3082	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	2	-168	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	73.1846978541279	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAGACTTTGAATTG	NA	False	NA	2	True	AATAAA	-13	NA	104315348	104339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.18	chr13	+	5843	10	FSM	ENSMUSG00000021712.16	ENSMUST00000069174.6	4258	10	-257	-1328	2	4	multi-exon	FALSE	canonical	3	158	junction_1	26.7600217756283	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTGTTATTCTAAAAAT	NA	False	NA	6	True	AATAAA	-16	NA	104315348	104339884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.19	chr13	+	3239	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	2	-8	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.9410382550756	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTAAATCTGACTGT	NA	False	NA	3	True	AATATA	-17	NA	104315348	104339517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104337738
ES.9936.2	chr13	+	5299	9	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-30	-160	intron_retention	FALSE	canonical	1	6	junction_8	77.0632856813152	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGAATTGTTTTCTGT	NA	False	NA	10	True	AATAAA	-21	NA	104315274	104339365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104328660_104334497_104334628_104335101_104335213_104337738
ES.9936.20	chr13	+	3563	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	44	-191	2	-164	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCTATATTACATCTAA	NA	False	NA	NA	False	NA	NA	NA	104315348	104339716	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.24	chr13	+	5300	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	45	-167	intron_retention	FALSE	canonical	3	141	junction_1	35.8962840678049	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAGACTTTGAATTGT	NA	False	NA	3	True	AATAAA	-14	NA	104315391	104339358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.25	chr13	+	3059	8	NIC	ENSMUSG00000021712.16	novel	3546	10	NA	NA	88	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	75.8868653096872	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTTGTTATTCTAAAA	NA	False	NA	4	True	AATAAA	-14	NA	104315434	104339882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104317745_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.26	chr13	+	3607	10	NNC	ENSMUSG00000021712.16	novel	4258	10	NA	NA	1974	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	72.1420067353444	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGTTGTTATTCTAAA	NA	False	NA	3	True	AATAAA	-13	NA	104317579	104339881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104317745_104321233_104321356_104323910_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.27	chr13	+	4388	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4442	444	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	55.184538897533	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTATATGT	NA	False	NA	NA	False	AATAAA	-23	NA	104320047	104340324	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.28	chr13	+	4249	9	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	4768	0	4467	0	3prime_fragment	FALSE	canonical	3	204	junction_4	17.8308020010318	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104320072	104339525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.29	chr13	+	5036	9	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	4771	-790	4470	435	3prime_fragment	FALSE	canonical	3	204	junction_4	17.8308020010318	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	104320075	104340315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.3	chr13	+	3853	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	-23	-414	-23	59	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAATTTAAGTCATTATT	NA	False	NA	61	True	AATAAA	-25	NA	104315281	104339939	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.30	chr13	+	3585	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4471	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGTTGTTATTCTAAA	NA	False	NA	3	True	AATAAA	-13	NA	104320076	104339881	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320503_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.31	chr13	+	3179	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4472	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.45228314783	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAATCTGACTGTGACG	NA	False	NA	7	True	AATATA	-21	NA	104320077	104339521	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.32	chr13	+	3636	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4472	5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.7140562426794	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTTATTCTAAAAATT	NA	False	NA	7	True	AATAAA	-17	NA	104320077	104339885	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320208_104320495_104320554_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.33	chr13	+	3962	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4473	48	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.45228314783	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGCTAGTTAACAATTT	NA	False	NA	50	True	AATAAA	-14	NA	104320078	104339928	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320550_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.34	chr13	+	3067	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4473	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAGACTTTGAATTG	NA	False	NA	2	True	AATAAA	-13	NA	104320078	104339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.35	chr13	+	3015	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	-168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.8781716434183	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAGACTTTGAATTG	NA	False	NA	2	True	AATAAA	-13	NA	104320079	104339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104321233_104321356_104323906_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.36	chr13	+	3557	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	55.184538897533	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104320079	104339525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.37	chr13	+	3234	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104320079	104339525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.38	chr13	+	4029	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	104320079	104340320	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.39	chr13	+	3638	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4475	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCTAGTTAACAATTTAA	NA	False	NA	52	True	AATAAA	-16	NA	104320080	104339930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320495_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.42	chr13	+	3391	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4477	-163	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	55.184538897533	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTTTGAATTGTTTTC	NA	False	NA	7	True	AATAAA	-18	NA	104320082	104339362	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.44	chr13	+	3969	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4477	435	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	72.45228314783	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	104320082	104340315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320174_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.46	chr13	+	3530	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4478	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.45228314783	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGGAGTTGTTATTCT	NA	False	NA	0	True	AATAAA	-10	NA	104320083	104339878	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.47	chr13	+	3052	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4478	-160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.45228314783	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGAATTGTTTTCTGT	NA	False	NA	10	True	AATAAA	-21	NA	104320083	104339365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320208_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.48	chr13	+	4077	9	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	4780	160	4479	-160	3prime_fragment	FALSE	canonical	3	204	junction_4	17.8308020010318	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGAATTGTTTTCTGT	NA	False	NA	10	True	AATAAA	-21	NA	104320084	104339365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.5	chr13	+	3440	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	-6	-18	-6	18	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATACTGTGGTGTTTGTG	NA	False	NA	29	True	AATATA	-43	NA	104315298	104339543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.51	chr13	+	3619	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4480	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	83.3226659839126	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGTTGTTATTCTAAAA	NA	False	NA	4	True	AATAAA	-14	NA	104320085	104339882	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320549_104321233_104321266_104324107_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.52	chr13	+	4620	9	NNC	ENSMUSG00000021712.16	novel	4258	10	NA	NA	4501	52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75.5379664473435	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAGTTAACAATTTAAGT	NA	False	NA	54	True	AATAAA	-18	NA	104320106	104339932	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104321356_104323910_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.54	chr13	+	3174	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4516	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	80.9177977950463	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGCTTAAATCTGACT	NA	False	NA	1	True	AATATA	-15	NA	104320121	104339515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104320173_104320503_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.55	chr13	+	2871	10	NNC	ENSMUSG00000021712.16	novel	4258	10	NA	NA	5698	-168	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	94.6889645101265	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGAGACTTTGAATTG	NA	False	NA	2	True	AATAAA	-13	NA	104321303	104339357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104321356_104323908_104324188_104324568_104324752_104325623_104325645_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.56	chr13	+	174	1	Intergenic	novelGene_8298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGAATATTTGCAG	NA	False	NA	NA	False	NA	NA	NA	104321977	104322151	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_104322000_104322200
ES.9936.57	chr13	+	4007	5	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	11519	-18	11218	18	3prime_fragment	FALSE	canonical	3	206	junction_2	11.9032558571174	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATACTGTGGTGTTTGTG	NA	False	NA	29	True	AATATA	-43	NA	104326823	104339543	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.58	chr13	+	5570	4	ISM	ENSMUSG00000021712.16	ENSMUST00000069187.12	3546	10	16093	-4	15834	4	3prime_fragment	FALSE	canonical	3	206	junction_1	5.71547606649408	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTGTTATTCTAAAAAT	NA	False	NA	6	True	AATAAA	-16	NA	104331439	104339884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.59	chr13	+	3780	4	ISM	ENSMUSG00000021712.16	ENSMUST00000069187.12	3546	10	18312	-433	18053	433	3prime_fragment	FALSE	canonical	3	206	junction_1	5.71547606649408	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGATTTATTTATTTAT	NA	False	NA	NA	False	AATAAA	-12	NA	104333658	104340313	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.6	chr13	+	3407	11	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	70.0359907476149	289	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATCTGACTGTGACGTA	NA	False	NA	9	True	AATATA	-23	NA	104315301	104339523	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323918_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.60	chr13	+	2270	4	ISM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	19076	0	18775	0	3prime_fragment	FALSE	canonical	3	206	junction_1	5.71547606649408	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104334380	104339525	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.61	chr13	+	3624	1	NIC	ENSMUSG00000021712.16	novel	3546	10	NA	NA	20650	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGAGTTGTTATTCTA	NA	False	NA	1	True	AATAAA	-11	NA	104336255	104339879	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104336300_104339900
ES.9936.7	chr13	+	7312	10	NIC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	5	57	intron_retention	FALSE	canonical	3	141	junction_1	31.0984101058416	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACAATTTAAGTCATTA	NA	False	NA	59	True	AATAAA	-23	NA	104315309	104339937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104315470_104317581_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.8	chr13	+	3248	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	7	161	7	-161	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGAATTGTTTTCTG	NA	False	NA	9	True	AATAAA	-20	NA	104315311	104339364	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9936.9	chr13	+	3973	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	8	-565	8	210	multi-exon	FALSE	canonical	3	141	junction_1	34.1	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACTGACTTATGTTTG	NA	False	NA	NA	False	AAGAAA	-19	NA	104315312	104340090	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ES.9937.1	chr13	+	631	1	Antisense	novelGene_ENSMUSG00000021713.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCTTTAAGTAAAAATACA	NA	False	NA	NA	False	NA	NA	NA	104341245	104341876	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_104341200_104341900
ES.9938.1	chr13	-	3106	13	Fusion	ENSMUSG00000114276.2_ENSMUSG00000021710.12	novel	2486	12	NA	NA	-9	0	multi-exon	TRUE	canonical	0	0	junction_1	87.7763493203038	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTATTATTTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	104246131	104082435	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_104083395_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.10	chr13	-	4109	13	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-32	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	85.3328043603396	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCACAGTACTTTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	104246154	104159560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209359_104209531_104245923
ES.9938.11	chr13	-	3941	12	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-38	1	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	87.8224166116154	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGCTCACAGTACTTT	NA	False	NA	-12	True	AATAAA	-20	NA	104246160	104159563	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104245923
ES.9938.12	chr13	-	3815	11	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	95.727791158054	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGCTCACAGTACTT	NA	False	NA	-13	True	AATAAA	-19	NA	104246039	104159564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.14	chr13	-	4246	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	113.032592042761	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATGAGCTCACAGTAC	NA	False	NA	-15	True	AATAAA	-17	NA	104246094	104159566	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104189733_104189848_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.15	chr13	-	4224	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	75	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.741195065008	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGCTCACAGTA	NA	False	NA	-16	True	AATAAA	-16	NA	104246019	104159567	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104212936_104213105_104245923
ES.9938.16	chr13	-	4069	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-47	140	-47	25	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTCAGCTTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	104246169	104159704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.17	chr13	-	4162	15	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	58	25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	126.319807938229	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTCAGCTTTTTCTAT	NA	False	NA	NA	False	NA	NA	NA	104246036	104159704	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104212018_104212166_104233098_104233178_104245923
ES.9938.18	chr13	-	3850	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-37	349	-37	2	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTGTTTATGTAGTTT	NA	False	NA	-4	True	AATAAA	-39	NA	104246159	104159913	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.2	chr13	-	6712	16	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-50	3742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	123.901502098329	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTACTGTTTTAGAC	NA	False	NA	NA	False	NA	NA	NA	104246172	104155822	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104156743_104157334_104157491_104157721_104157831_104158249_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.20	chr13	-	3944	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	106.83095090378	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCCTTTGTTTATGTA	NA	False	NA	-8	True	AATAAA	-35	NA	104246131	104159917	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104192153_104192280_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.21	chr13	-	3482	12	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	29	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	87.8224166116154	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACAGCAGGGAAGCCCTT	NA	False	NA	-18	True	AATAAA	-45	NA	104246065	104159927	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104245923
ES.9938.22	chr13	-	3990	13	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-8	-21	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	87.7763493203038	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTGGTACACAGCAGG	NA	False	NA	-27	True	AATAAA	-36	NA	104246111	104159936	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161800_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.23	chr13	-	3855	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	39	-36	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.564134976334	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATACAGAGTACCAAGAG	NA	False	NA	-42	True	AATAAA	-21	NA	104246055	104159951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104212018_104212166_104245923
ES.9938.24	chr13	-	3586	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	68	-42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.3387085001857	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGTTATACAGAGTAC	NA	False	NA	-48	True	AATAAA	-15	NA	104246026	104159957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104160871_104160957_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.25	chr13	-	3958	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	113.087440641166	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGTTTTATACTTGAG	NA	False	NA	NA	False	TTTAAA	-40	NA	104246122	104161085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104199182_104200500_104205702_104205852_104209270_104209531_104245923
ES.9938.26	chr13	-	2628	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-89	1623	-89	-95	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGATTTTTTTACTGTT	NA	False	NA	0	True	CATAAA	-42	NA	104246211	104161187	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.27	chr13	-	2273	11	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-9	-106	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	95.727791158054	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGACTGTAATTTGATT	NA	False	NA	-11	True	TATAAA	-41	NA	104246131	104161198	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.3	chr13	-	4172	13	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-10	14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	87.6241975712189	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTTGTCTTTTAATGT	NA	False	NA	1	True	AATAAA	-33	NA	104246132	104159550	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196064_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.30	chr13	-	3073	12	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-7	-114	intron_retention	FALSE	canonical	3	279	junction_1	23.3910345189726	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTCATATGACTGTA	NA	False	NA	-19	True	TATAAA	-33	NA	104246110	104161206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.32	chr13	-	2399	12	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-6	-114	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	91.5183222408777	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTCATATGACTGTA	NA	False	NA	-19	True	TATAAA	-33	NA	104246109	104161206	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104205702_104205852_104209270_104209531_104245923
ES.9938.33	chr13	-	2327	5	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	61932	1644	-10040	-116	3prime_fragment	FALSE	canonical	3	279	junction_1	21.7313138121007	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGTTTCATATGACTG	NA	False	NA	-21	True	TATAAA	-31	NA	104184190	104161208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696
ES.9938.34	chr13	-	2083	10	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-18	-116	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	97.7741160930529	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGTTTCATATGACTG	NA	False	NA	-21	True	TATAAA	-31	NA	104246140	104161208	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.36	chr13	-	4365	7	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	54132	1660	6372	-132	3prime_fragment	FALSE	canonical	3	279	junction_1	19.7371617907833	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGATTTCTTTTGATAA	NA	False	NA	-37	True	TATAAA	-15	NA	104191990	104161224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011
ES.9938.38	chr13	-	2403	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-35	1794	-35	-266	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTAGATTTCTATTCA	NA	False	NA	NA	False	NA	NA	NA	104246157	104161358	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.39	chr13	-	2487	12	FSM	ENSMUSG00000021710.12	ENSMUST00000224945.2	2486	12	2	-3	2	3	multi-exon	FALSE	canonical	3	279	junction_9	21.8272708341221	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTCTGTGTTGTGATAT	NA	False	NA	NA	False	AAGAAA	-24	NA	104246092	104171715	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.4	chr13	-	4249	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	-74	-13	-74	13	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGTCTTTTAATG	NA	False	NA	0	True	AATAAA	-32	NA	104246196	104159551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.40	chr13	-	3505	8	ISM	ENSMUSG00000021710.12	ENSMUST00000224945.2	2486	12	-12	13246	-3	-12819	5prime_fragment	FALSE	canonical	3	279	junction_5	23.9787320731671	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTGTTTTATTTTGT	NA	False	NA	NA	False	ACTAAA	-15	NA	104246106	104184964	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9938.41	chr13	-	3005	2	ISM	ENSMUSG00000021710.12	ENSMUST00000225324.2	453	4	-2718	36171	-2718	8131	5prime_fragment	FALSE	canonical	3	300	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTCTAGTATCAGC	4263	False	NA	NA	False	ATTAAA	-18	NA	104201080	104195900	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104196078_104198252
ES.9938.5	chr13	-	3818	10	NIC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-22	6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	100.905896755343	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCACAGTACTTTTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	104246144	104159558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104205702_104205852_104209270_104209531_104245923
ES.9938.6	chr13	-	5258	7	ISM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	54905	-6	7145	6	3prime_fragment	FALSE	canonical	3	279	junction_1	19.7371617907833	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCACAGTACTTTTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	104191217	104159558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011
ES.9938.7	chr13	-	4344	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	-29	6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	111.564134976334	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCACAGTACTTTTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	104246151	104159558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104212018_104212166_104245923
ES.9938.8	chr13	-	4182	14	NNC	ENSMUSG00000021710.12	novel	4162	13	NA	NA	83	5	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	106.83095090378	299	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCACAGTACTTTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	104246011	104159559	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104192153_104192280_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ES.9939.1	chr13	-	1643	14	NNC	ENSMUSG00000021711.18	novel	909	4	NA	NA	11	17932	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	328.771876451685	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTTCTTTCATGTGG	NA	False	NA	NA	False	NA	NA	NA	104314904	104260724	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104260875_104273843_104273906_104274314_104274378_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.11	chr13	-	3217	12	NNC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	251	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	258.375279630167	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGATCTGAGTCAACT	NA	False	NA	NA	False	AATAAA	-20	NA	104314664	104278661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297606_104303372_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.14	chr13	-	2991	9	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	16702	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	350.583085730045	471	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATAAAGGATCTGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	104298213	104278666	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104298150
ES.9939.15	chr13	-	7229	11	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	8	-341	intron_retention	FALSE	canonical	3	393	junction_2	129.47822210704	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTCTTAAATGCATA	NA	False	NA	NA	False	NA	NA	NA	104314907	104279004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.17	chr13	-	3162	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-6	-341	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTCTTAAATGCATA	NA	False	NA	NA	False	NA	NA	NA	104314939	104279004	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.18	chr13	-	3411	5	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	27203	354	27141	-347	3prime_fragment	FALSE	canonical	3	494	junction_2	147.320017309258	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATCTGTTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	104287774	104279010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557
ES.9939.19	chr13	-	3174	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	10	354	0	-347	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATCTGTTTTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	104314967	104279010	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.2	chr13	-	4293	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	37	-792	-7	792	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTCTAATTGTCTG	NA	False	NA	NA	False	AATACA	-19	NA	104314940	104277864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.20	chr13	-	3153	12	NNC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	-6	-349	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAAATCTGTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	104314939	104279012	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290794_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.22	chr13	-	2505	13	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-7	-359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	299.157242191386	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGTCAAAGACAAAATC	NA	False	NA	NA	False	NA	NA	NA	104314940	104279022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104279682_104280321_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.23	chr13	-	3147	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-6	-366	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	302.524228932013	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATATAAGTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	104314921	104279029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280883_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.25	chr13	-	2873	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	8	576	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAATCCCTACTATATAT	NA	False	NA	NA	False	AATAAA	-22	NA	104314907	104279248	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.26	chr13	-	2755	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	424	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAACCATTCA	NA	False	NA	NA	False	NA	NA	NA	104314941	104279400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.27	chr13	-	2146	8	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	23316	424	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	360.044328336591	468	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTACAACCATTCA	NA	False	NA	NA	False	NA	NA	NA	104291599	104279400	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104291516
ES.9939.28	chr13	-	2754	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-13	405	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	104314946	104279419	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.29	chr13	-	2328	12	NNC	ENSMUSG00000021711.18	novel	2342	13	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGATTTTTTTCTTTC	NA	False	NA	-2	True	AATAAA	-42	NA	104314925	104279824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.3	chr13	-	4286	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	5	792	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.125412341616	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTCTAATTGTCTG	NA	False	NA	NA	False	AATACA	-19	NA	104314926	104277864	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.33	chr13	-	2322	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	13	-22	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAATGATTCCAACT	NA	False	NA	-24	True	AATAAA	-20	NA	104314954	104279846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.34	chr13	-	2430	11	NIC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	14	-22	intron_retention	FALSE	canonical	3	331	junction_4	157.405717812283	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAATGATTCCAACT	NA	False	NA	-24	True	AATAAA	-20	NA	104314901	104279846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.35	chr13	-	2011	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	54	1473	-8	-305	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTCAACTGCATTC	NA	False	NA	NA	False	AATATA	-17	NA	104314923	104280129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.38	chr13	-	1756	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	2	25	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTGTGTCCTTTAA	NA	False	NA	0	True	AAAACA	-17	NA	104314965	104280436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.39	chr13	-	9252	9	NIC	ENSMUSG00000021711.18	novel	2342	13	NA	NA	-7	16	intron_retention	FALSE	canonical	3	679	junction_6	54.2976461276177	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTGTATATATTTTGT	NA	False	NA	-9	True	AAAACA	-8	NA	104314940	104280445	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104284791_104286557_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.40	chr13	-	7706	12	NNC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-8	7	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	310.997462188365	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTATTTTCTGTAT	NA	False	NA	-18	True	AAAACA	-40	NA	104314941	104280454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291822_104291883_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.41	chr13	-	3815	12	NIC	ENSMUSG00000021711.18	novel	2342	13	NA	NA	-6	7	intron_retention	FALSE	canonical	3	346	junction_5	154.359942133758	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTATTTTCTGTAT	NA	False	NA	-18	True	AAAACA	-40	NA	104314921	104280454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.42	chr13	-	5356	9	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	9913	7	intron_retention	FALSE	canonical	3	393	junction_2	144.376893926972	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTATTTTCTGTAT	NA	False	NA	-18	True	AAAACA	-40	NA	104305002	104280454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970
ES.9939.43	chr13	-	8485	10	NIC	ENSMUSG00000021711.18	novel	2342	13	NA	NA	-6	7	intron_retention	FALSE	canonical	3	679	junction_7	51.516987489565	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTTATTTTCTGTAT	NA	False	NA	-18	True	AAAACA	-40	NA	104314921	104280454	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280754_104280911_104283853_104284591_104284791_104286557_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.46	chr13	-	1323	8	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	23079	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	360.044328336591	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATTTCTTTATTTT	NA	False	NA	23	True	AAAACA	-34	NA	104291836	104280460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104291516
ES.9939.47	chr13	-	1723	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	11	1804	1	1	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATTTCTTTATTTT	NA	False	NA	23	True	AAAACA	-34	NA	104314966	104280460	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.48	chr13	-	2515	1	NIC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	31939	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104282976	104280461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104280500_104283000
ES.9939.5	chr13	-	3538	12	NNC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	239.911863982044	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAGTCAACTATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	104314967	104278656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.50	chr13	-	1103	8	NNC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	23291	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	298.559808386316	465	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104291624	104280461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104291516
ES.9939.51	chr13	-	1704	12	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	249.125412341616	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314941	104280461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.52	chr13	-	1816	11	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	10	0	intron_retention	FALSE	canonical	3	331	junction_4	173.267105937625	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314905	104280461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.54	chr13	-	4380	11	NNC	ENSMUSG00000021711.18	novel	1689	13	NA	NA	6	0	intron_retention	FALSE	non_canonical	0	0	junction_4	242.770344152658	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314925	104280461	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104280754_104280911_104283853_104284591_104284791_104286557_104286698_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.55	chr13	-	3656	1	NIC	ENSMUSG00000021711.18	novel	3538	12	NA	NA	24995	-5803	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGTCCCACAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	104289920	104286264	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104286300_104289900
ES.9939.56	chr13	-	785	4	FSM	ENSMUSG00000021711.18	ENSMUST00000142745.2	909	4	53	71	1	-71	multi-exon	FALSE	canonical	3	679	junction_1	43.2229362980145	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTTTTTAAAGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	104314914	104303128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104303452_104304970_104305071_104306327_104306397_104314621
ES.9939.57	chr13	-	2147	1	Intergenic	novelGene_8297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACTGAAGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	104309723	104307576	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104307600_104309700
ES.9939.58	chr13	-	1897	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	-287	-1	-287	1	multi-exon	FALSE	canonical	3	68	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGATTTTGTATTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	104315234	104310228	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104311513_104314621
ES.9939.59	chr13	-	1286	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	1	322	1	-322	multi-exon	FALSE	canonical	3	68	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGACTTAAATTTTGATG	NA	False	NA	NA	False	NA	NA	NA	104314946	104310551	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104311513_104314621
ES.9939.7	chr13	-	3528	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	10	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	157.730704704606	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAGTCAACTATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	104314967	104278656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ES.994.1	chr1	+	1421	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-47	-2	-47	2	multi-exon	FALSE	canonical	3	31	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCGAGTCTTTTATC	NA	False	NA	-12	True	NA	NA	NA	89857908	89859586	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89858176_89858432
ES.994.2	chr1	+	3967	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-44	-893	-17	893	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCCCCACGCTTGTGG	NA	False	NA	NA	False	AATAAA	-14	NA	89857938	89861905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89857900_89861900
ES.994.3	chr1	+	2335	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-42	737	-15	691	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGAAGCTCTTCTTT	NA	False	NA	26	True	GATAAA	-33	NA	89857940	89860275	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89857900_89860300
ES.994.4	chr1	+	2063	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-8	-683	-8	683	multi-exon	FALSE	canonical	3	31	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACCCGATTCTTTGAAGC	NA	False	NA	18	True	GATAAA	-25	NA	89857947	89860267	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89858176_89858432
ES.994.5	chr1	+	613	3	NNC	ENSMUSG00000092627.3	novel	1372	2	NA	NA	-7	677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCGACCCGATTCTT	NA	False	NA	12	True	GATAAA	-19	NA	89857948	89860261	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_+_89858176_89859728_89859871_89860017
ES.994.6	chr1	+	1773	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-34	1291	-7	137	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAGGCACTAATTAAGC	NA	False	NA	16	True	AATAAA	-13	NA	89857948	89859721	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89857900_89859700
ES.994.7	chr1	+	1533	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	-7	-154	-7	154	multi-exon	FALSE	canonical	3	31	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGTTGGCAACGGAGGG	NA	False	NA	33	True	AATAAA	-30	NA	89857948	89859738	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89858176_89858432
ES.994.8	chr1	+	2610	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	4	-1242	4	-186	multi-exon	FALSE	canonical	3	31	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCTACAGTGACAGTCT	NA	False	NA	NA	False	AATAAA	-19	NA	89857959	89860826	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_+_89858176_89858432
ES.9940.1	chr13	-	171	1	Intergenic	novelGene_8299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATGGGGTAC	NA	False	NA	NA	False	NA	NA	NA	104333376	104333205	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104333200_104333400
ES.9941.1	chr13	-	222	1	Intergenic	novelGene_8300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATAACTGTCTTATATA	NA	False	NA	NA	False	NA	NA	NA	104334187	104333965	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104334000_104334200
ES.9942.1	chr13	-	7005	10	ISM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	3416	-4926	3360	4926	3prime_fragment	FALSE	canonical	3	267	junction_6	23.7673912933012	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTTGTTAGCAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	104361914	104336705	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857
ES.9942.11	chr13	-	2469	12	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	126.765417501699	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365324	104341631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104360044_104360178_104361857_104361961_104365113
ES.9942.13	chr13	-	1880	10	NIC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	104.615462823277	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365316	104341631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.14	chr13	-	2332	11	NIC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	98.9659032192401	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365331	104341631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361868_104361961_104365113
ES.9942.16	chr13	-	2474	12	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	6	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	126.955448683439	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATACGTGTCAAATG	NA	False	NA	-15	True	TATAAA	-9	NA	104365324	104341633	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104360044_104360185_104361857_104361961_104365113
ES.9942.17	chr13	-	5249	9	NIC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	2	-75	intron_retention	FALSE	canonical	1	1	junction_4	106.157827667111	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCTCTTATGTTTAGT	NA	False	NA	-88	True	ATTAAA	-22	NA	104365349	104341706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857
ES.9942.19	chr13	-	2224	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	10	108	10	-108	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTATTAAATAATGGAT	NA	False	NA	-121	True	NA	NA	NA	104365320	104341739	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.2	chr13	-	3891	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-19	-1530	2	1530	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCAGTCTCCATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	104365349	104340101	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.20	chr13	-	2105	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-19	256	2	-256	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAAGGCCTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	104365349	104341887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.21	chr13	-	4341	7	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	8190	-256	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	123.840511232077	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAAGGCCTTTTTTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	104357084	104341887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104355686_104355737
ES.9942.3	chr13	-	182	1	Intergenic	novelGene_8301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTTCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	104340497	104340315	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104340300_104340500
ES.9942.4	chr13	-	2589	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	6	-253	6	253	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAAGTCTACTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	104365324	104341378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.5	chr13	-	5129	10	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	2	253	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	137.582657534738	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAAGTCTACTGATAT	NA	False	NA	NA	False	AATAAA	-16	NA	104365349	104341378	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104353596_104355686_104355737_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.6	chr13	-	2404	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	-52	-10	-31	10	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAATGACTGGTTATTTG	NA	False	NA	-3	True	TATAAA	-21	NA	104365382	104341621	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.7	chr13	-	5071	11	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	100.099950049938	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTCAAATGACTGGTT	NA	False	NA	-8	True	TATAAA	-16	NA	104365349	104341626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104355686_104355737_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ES.9942.8	chr13	-	5001	10	ISM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	499	-5	443	5	3prime_fragment	FALSE	canonical	3	267	junction_6	23.7673912933012	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTCAAATGACTGGTT	NA	False	NA	-8	True	TATAAA	-16	NA	104364831	104341626	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857
ES.9942.9	chr13	-	2454	12	NNC	ENSMUSG00000021713.10	novel	2342	11	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	126.955448683439	209	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365320	104341631	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104360044_104360178_104361868_104361961_104365113
ES.9943.1	chr13	+	1055	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-61	-2	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCATAGTTTGTCTTTG	NA	False	NA	8	True	AATAAA	-19	NA	104365401	104386123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.11	chr13	+	3151	1	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	8194	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGGCATAGTTTGTCTT	5915	False	NA	6	True	AATAAA	-17	NA	104382970	104386121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104383000_104386100
ES.9943.2	chr13	+	1032	10	FSM	ENSMUSG00000021714.16	ENSMUST00000224500.2	1353	10	325	-4	-19	4	multi-exon	FALSE	canonical	3	57	junction_4	127.2119840616	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGTCTTTGTTGTTG	NA	False	NA	14	True	AATAAA	-25	NA	104365443	104386129	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370741_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.3	chr13	+	1325	10	FSM	ENSMUSG00000021714.16	ENSMUST00000070761.10	1306	10	-19	0	-19	0	multi-exon	FALSE	canonical	1	3	junction_9	143.8340092684	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTATGTAAAATATTG	NA	False	NA	NA	False	AATAAA	-13	NA	104365443	104383641	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104383074
ES.9943.4	chr13	+	1085	10	NNC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-9	-2	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	135.125547474365	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCATAGTTTGTCTTTG	NA	False	NA	8	True	AATAAA	-19	NA	104365453	104386123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104365593_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.5	chr13	+	2965	9	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	-7	3	intron_retention	FALSE	canonical	3	409	junction_4	30.7629545882706	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTTTGTCTTTGTTGTT	NA	False	NA	13	True	AATAAA	-24	NA	104365455	104386128	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.6	chr13	+	2732	9	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	1	-2	intron_retention	FALSE	canonical	3	57	junction_3	134.405112904978	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCATAGTTTGTCTTTG	NA	False	NA	8	True	AATAAA	-19	NA	104365463	104386123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104367388_104369165_104369223_104370654_104370741_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.7	chr13	+	3775	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	1	5	intron_retention	FALSE	canonical	3	409	junction_5	30.3205101100449	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCCAGGAAATGTTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	104365463	104388905	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ES.9943.8	chr13	+	557	4	ISM	ENSMUSG00000021714.16	ENSMUST00000225557.2	351	5	-11	582	2	-582	5prime_fragment	FALSE	canonical	3	439	junction_1	18.9912260443255	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCATAGTTATCTTCTT	NA	False	NA	NA	False	NA	NA	NA	104365464	104370957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654
ES.9943.9	chr13	+	3237	8	NNC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	3	-4	intron_retention	FALSE	canonical	3	15	junction_1	153.056478837995	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGGCATAGTTTGTCTT	NA	False	NA	6	True	AATAAA	-17	NA	104365465	104386121	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104365511_104367239_104367388_104369165_104369223_104370654_104372734_104378696_104378780_104378862_104379381_104381785_104381840_104385868
ES.9944.1	chr13	-	178	1	Intergenic	novelGene_8302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	104416941	104416763	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104416800_104416900
ES.9945.1	chr13	+	214	1	Intergenic	novelGene_8303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAGTGATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	104486678	104486892	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_104486700_104486900
ES.9946.1	chr13	-	209	1	Intergenic	novelGene_8304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTGTCTATGTATTT	NA	False	NA	NA	False	NA	NA	NA	104592761	104592552	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104592600_104592800
ES.9947.1	chr13	-	622	3	Intergenic	novelGene_8305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAAGTCTGCGTGGCGT	NA	False	NA	NA	False	NA	NA	NA	104672049	104668639	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104668964_104669522_104669722_104671950
ES.9948.1	chr13	+	183	1	Intergenic	novelGene_8306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAGAAAACC	3942	False	NA	NA	False	NA	NA	NA	104676381	104676564	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_104676400_104676600
ES.9949.1	chr13	-	182	1	Intergenic	novelGene_8307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAAAAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	104743402	104743220	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_104743200_104743400
ES.995.1	chr1	-	2172	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	-43	6	-43	4	multi-exon	FALSE	canonical	3	46	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATAAGCTTAATCC	NA	False	NA	NA	False	AATAAA	-14	NA	89858944	89855683	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_89856866_89857954
ES.995.2	chr1	-	2033	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	-67	169	-67	-159	multi-exon	FALSE	canonical	3	46	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTGCCTGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	89858968	89855846	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr1_-_89856866_89857954
ES.9950.1	chr13	+	2240	5	NNC	ENSMUSG00000021716.15	novel	611	3	NA	NA	-571	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	71.5973986957627	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAAAAGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	104953113	104975779	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104953182_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.2	chr13	+	2392	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	-17	-10	-17	10	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTAAAACACGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	104953667	104975792	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.3	chr13	+	513	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	0	1852	0	-938	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAGGA	NA	False	NA	NA	False	AAGAAA	-13	NA	104953684	104973930	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.4	chr13	+	1437	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	16	912	16	2	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTGTATATGATGCCT	NA	False	NA	NA	False	ATTAAA	-16	NA	104953700	104974870	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.5	chr13	+	1732	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	29	604	29	1	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTGTCTCTGAGGTT	NA	False	NA	18	True	TATAAA	-28	NA	104953713	104975178	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.6	chr13	+	2143	4	ISM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	8084	1826	-1397	-912	3prime_fragment	FALSE	canonical	3	138	junction_3	18.8325958557674	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAAGTCAAAGAAAGGAA	NA	False	NA	NA	False	AAAAAG	-20	NA	104961768	104973956	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_104963611_104969361_104969506_104970755_104970829_104973872
ES.9950.7	chr13	+	8593	2	NNC	ENSMUSG00000021716.15	novel	611	3	NA	NA	-232	32	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAGCAGGAGTTA	NA	False	NA	NA	False	AATAAA	-30	NA	104962933	104975814	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_104968955_104973242
ES.9951.1	chr13	-	3674	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	22	-1625	22	1625	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACTTGTATATTTCTAAT	NA	False	NA	NA	False	NA	NA	NA	104953439	104766022	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.10	chr13	-	1868	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	13	-187	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	194.907715987539	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGCAGATTGCATT	NA	False	NA	-7	True	AATAAA	-27	NA	104953448	104767834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941518_104943140_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.12	chr13	-	1843	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	35	-187	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	198.039085258291	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGCAGATTGCATT	NA	False	NA	-7	True	AATAAA	-27	NA	104953426	104767834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797919_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.15	chr13	-	1764	15	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	-2	-187	combination_of_known_junctions	FALSE	canonical	3	13	junction_14	187.819387841031	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGCAGATTGCATT	NA	False	NA	-7	True	AATAAA	-27	NA	104953652	104767834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953308_104953618
ES.9951.16	chr13	-	1968	15	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	18	-187	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	247.433066603839	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGCAGATTGCATT	NA	False	NA	-7	True	AATAAA	-27	NA	104953443	104767834	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104934677_104934780_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.17	chr13	-	1861	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	31	-188	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_5	188.393143005155	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCATTTGCAGATTGCAT	NA	False	NA	-8	True	AATAAA	-26	NA	104953430	104767835	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929168_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.18	chr13	-	3163	1	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	158124	-189	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCATTTGCAGATTGCA	NA	False	NA	-9	True	AATAAA	-25	NA	104770999	104767836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104767800_104771000
ES.9951.19	chr13	-	2043	15	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	26	-189	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	245.079048055762	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCATTTGCAGATTGCA	NA	False	NA	-9	True	AATAAA	-25	NA	104953435	104767836	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104775895_104776083_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.2	chr13	-	2395	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	37	-361	37	361	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTAATGAAGTCGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	104953424	104767286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.21	chr13	-	5926	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	13	-191	intron_retention	FALSE	canonical	1	2	junction_12	256.061152089628	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACCATTTGCAGATTG	NA	False	NA	-11	True	AATAAA	-23	NA	104953448	104767838	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104945510_104945811_104947724_104947822_104953194
ES.9951.23	chr13	-	1761	13	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	-197	-194	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	231.118100521982	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAACCATTTGCAGA	NA	False	NA	-14	True	AATAAA	-20	NA	104953847	104767841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953331_104953618
ES.9951.24	chr13	-	1793	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	73	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	185.389147726275	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAACCATTTGCAGA	NA	False	NA	-14	True	AATAAA	-20	NA	104953388	104767841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794630_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.25	chr13	-	1989	15	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	16	-194	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	238.360128839553	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAACCATTTGCAGA	NA	False	NA	-14	True	AATAAA	-20	NA	104953445	104767841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104771171_104771300_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.28	chr13	-	1780	15	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	50	-194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	190.844912460995	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAACCATTTGCAGA	NA	False	NA	-14	True	AATAAA	-20	NA	104953411	104767841	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943205_104943251_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.29	chr13	-	5238	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	12	-195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	198.001613764268	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTTAACCATTTGCAG	NA	False	NA	-15	True	AATAAA	-19	NA	104953449	104767842	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104932533_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.3	chr13	-	2053	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	13	5	13	-5	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATATAGGCCTCCCGCT	NA	False	NA	-4	True	AATAAA	-32	NA	104953448	104767652	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.30	chr13	-	1759	13	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	18	-196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	205.880274674384	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGTTAACCATTTGCA	NA	False	NA	-16	True	AATAAA	-18	NA	104953443	104767843	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.34	chr13	-	1702	12	NNC	ENSMUSG00000021715.13	novel	353	4	NA	NA	40	45703	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	194.897557324969	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAATTGATAATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	104953421	104837319	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104837804_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.35	chr13	-	2605	11	NIC	ENSMUSG00000021715.13	novel	353	4	NA	NA	60	1206	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	205.557680469497	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTATAATTTGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	104953401	104925781	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104927287_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.36	chr13	-	2056	11	NNC	ENSMUSG00000021715.13	novel	353	4	NA	NA	24	-414	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	205.270772395877	335	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	104953437	104927401	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104928322_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.37	chr13	-	1372	6	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	25	3993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	276.844071636002	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATATTGTTTACATTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	104953436	104940236	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104940863_104941374_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.4	chr13	-	2048	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	23	-9	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_5	188.393143005155	351	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGCATATAGGCCTCC	NA	False	NA	-8	True	AATAAA	-28	NA	104953438	104767656	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929168_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.5	chr13	-	2994	5	ISM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	22347	25	-1956	-25	3prime_fragment	FALSE	canonical	3	590	junction_4	110.626341799772	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTTTTGCATAT	NA	False	NA	-24	True	AATAAA	-12	NA	104931114	104767672	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006
ES.9951.6	chr13	-	1974	14	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	13	-30	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	197.791714007886	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGATGGGTTTTTTTG	NA	False	NA	-29	True	AATAAA	-7	NA	104953448	104767677	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943209_104944201_104944341_104947724_104947822_104953194
ES.9951.7	chr13	-	1650	12	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	58	-177	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	213.59055601743	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGCATTAGCATGTCTC	NA	False	NA	3	True	AATAAA	-37	NA	104953403	104767824	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9951.9	chr13	-	5608	13	NIC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	37	-185	intron_retention	FALSE	canonical	3	502	junction_7	87.0090592345929	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGCAGATTGCATTAG	NA	False	NA	-5	True	AATAAA	-29	NA	104953424	104767832	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ES.9952.1	chr13	-	765	3	FSM	ENSMUSG00000042655.6	ENSMUST00000043061.5	1310	3	1	544	1	-1	multi-exon	FALSE	canonical	3	12	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGTTTGTTATGT	NA	False	NA	NA	False	NA	NA	NA	105000400	104982334	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104982572_104994796_104994955_105000030
ES.9952.2	chr13	-	495	3	FSM	ENSMUSG00000042655.6	ENSMUST00000223913.2	507	3	-41	53	-41	-40	multi-exon	FALSE	canonical	0	0	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	104999861	104982386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_104982572_104994796_104994955_104999709
ES.9952.3	chr13	-	262	2	NNC	ENSMUSG00000042655.6	novel	443	2	NA	NA	13626	-40	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATACAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	104986194	104982386	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_104982572_104986117
ES.9953.1	chr13	+	175	1	Intergenic	novelGene_8308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	105037979	105038154	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_105038000_105038200
ES.9954.1	chr13	+	769	3	Intergenic	novelGene_8309	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATCACACAAGACT	NA	False	NA	NA	False	AATAAA	-18	NA	105048411	105052123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_105048972_105051358_105051433_105051988
ES.9955.1	chr13	-	6981	6	FSM	ENSMUSG00000021719.10	ENSMUST00000063551.7	7077	6	100	-4	100	4	multi-exon	FALSE	canonical	0	0	junction_1	1.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCATTGTAAGTCATCA	NA	False	NA	NA	False	AATAAA	-19	NA	105191338	105082407	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_105088091_105100591_105100663_105103488_105103637_105119373_105119505_105189465_105189633_105190557
ES.9955.2	chr13	-	1597	6	FSM	ENSMUSG00000021719.10	ENSMUST00000063551.7	7077	6	438	5042	438	-5042	multi-exon	FALSE	canonical	0	0	junction_1	1.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTTCAAGAATCCAA	NA	False	NA	NA	False	TATAAA	-37	NA	105191000	105087453	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_105088091_105100591_105100663_105103488_105103637_105119373_105119505_105189465_105189633_105190557
ES.9955.3	chr13	-	5627	2	ISM	ENSMUSG00000021719.10	ENSMUST00000063551.7	7077	6	403	102072	403	-102072	5prime_fragment	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	105191035	105184483	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_105189633_105190557
ES.9956.2	chr13	-	2591	8	FSM	ENSMUSG00000021720.12	ENSMUST00000226044.2	3279	8	115	573	115	2	multi-exon	FALSE	canonical	0	0	junction_3	1.8070158058105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTGTTTTTTGACT	NA	False	NA	NA	False	AATAAA	-14	NA	105430795	105267081	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_105268072_105304035_105304162_105317957_105318184_105383170_105383207_105386118_105387076_105388759_105388856_105407412_105407548_105430770
ES.9957.1	chr13	+	161	1	Intergenic	novelGene_8310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	106064012	106064173	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_106064000_106064200
ES.9958.1	chr13	+	1624	2	Intergenic	novelGene_8311	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106920789	106925368	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_106921843_106924797
ES.9959.1	chr13	-	209	1	Intergenic	novelGene_8312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAGAAAGGGCAA	9496	False	NA	0	True	NA	NA	NA	106927433	106927224	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_106927200_106927400
ES.996.1	chr1	+	215	2	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGTATCTTGCCAGG	2538	False	NA	NA	False	NA	NA	NA	89873660	89874249	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_+_89873794_89874167
ES.9960.1	chr13	+	176	1	Intergenic	novelGene_8313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106985931	106986107	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_106985900_106986100
ES.9961.1	chr13	+	3470	1	Intergenic	novelGene_8314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCGGGGTGGTGCAC	NA	False	NA	NA	False	NA	NA	NA	107007586	107011056	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107007600_107011100
ES.9962.1	chr13	+	211	1	Intergenic	novelGene_8315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAGTAGTATAAGCATTA	NA	False	NA	NA	False	NA	NA	NA	107021219	107021430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107021200_107021400
ES.9963.1	chr13	+	223	1	Intergenic	novelGene_8316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTCAGACGGAAAAGACAA	5339	False	NA	NA	False	NA	NA	NA	107039634	107039857	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107039600_107039900
ES.9964.1	chr13	+	1661	2	Antisense	novelGene_ENSMUSG00000042590.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGACCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	107047941	107053177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_107048618_107052192
ES.9964.2	chr13	+	5234	1	Intergenic	novelGene_8317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGACCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	107047943	107053177	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107047900_107053200
ES.9964.3	chr13	+	5948	2	Antisense	novelGene_ENSMUSG00000042590.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAGCAACTAAAGGAAAGA	NA	False	NA	NA	False	AATAAA	-44	NA	107047943	107054361	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_107053685_107054154
ES.9965.1	chr13	+	248	1	Intergenic	novelGene_8318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATGTATTTTGTATG	NA	False	NA	NA	False	NA	NA	NA	107059310	107059558	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107059300_107059600
ES.9966.1	chr13	+	159	1	Intergenic	novelGene_8319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATATATCTTT	3610	False	NA	NA	False	NA	NA	NA	107067356	107067515	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107067400_107067500
ES.9967.1	chr13	+	1525	14	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-10133	-840	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	258.478799789902	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	9755	False	NA	15	True	NA	NA	NA	107073501	107095428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_107073793_107083696_107083792_107084093_107084168_107084575_107084629_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.10	chr13	+	2483	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-5	-7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	190.645770999516	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATGAGCAAGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	107083629	107096725	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.12	chr13	+	2496	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-2	-841	intron_retention	FALSE	canonical	3	551	junction_5	41.2905991751986	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083632	107095427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107091248_107093601_107093709_107095162
ES.9967.13	chr13	+	4299	8	NIC	ENSMUSG00000021692.10	novel	3338	10	NA	NA	3	-841	intron_retention	FALSE	canonical	3	551	junction_3	45.4092501589709	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083637	107095427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107091248_107093601_107093709_107095162
ES.9967.14	chr13	+	2539	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-29	-459	3	-5	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGAGCAAGTTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	107083637	107096727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.15	chr13	+	3649	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-29	-1569	3	1105	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTACTATACACC	NA	False	NA	NA	False	AATAAA	-18	NA	107083637	107097837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.16	chr13	+	5008	8	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	6	-977	intron_retention	FALSE	canonical	3	551	junction_4	33.3142122028103	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATCATTTAAATTATTT	NA	False	NA	NA	False	AATACA	-18	NA	107083640	107095291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107093709_107095162
ES.9967.17	chr13	+	1096	10	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	8	-846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	256.894751951547	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTAGACCTAGTGTTTTA	NA	False	NA	9	True	NA	NA	NA	107083642	107095422	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086121_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ES.9967.18	chr13	+	1961	12	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	8	-97	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	180.631216470566	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAACTAAACTAGCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	107083642	107096171	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091231_107093601_107093709_107095162
ES.9967.19	chr13	+	5521	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	8	-85	intron_retention	FALSE	canonical	3	504	junction_4	52.0258720063844	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTCTCTATTTATACT	NA	False	NA	NA	False	AATAAA	-32	NA	107083642	107096183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107093709_107095162
ES.9967.2	chr13	+	1315	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-103	839	-71	-839	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGTGTTTTATATATAA	NA	False	NA	16	True	NA	NA	NA	107083563	107095429	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.20	chr13	+	1118	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-24	957	8	-957	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATACTTTTTTACCATT	NA	False	NA	NA	False	AATACA	-38	NA	107083642	107095311	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.21	chr13	+	3637	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-8	1099	intron_retention	FALSE	canonical	1	7	junction_8	195.187089737001	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTTTACTTTTTACTA	NA	False	NA	NA	False	AATAAA	-12	NA	107083654	107097831	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
ES.9967.22	chr13	+	2389	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-5	-6	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	191.021296724918	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTATGAGCAAGTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	107083657	107096726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ES.9967.23	chr13	+	4403	9	NIC	ENSMUSG00000021692.10	novel	3338	10	NA	NA	-4	-852	intron_retention	FALSE	canonical	3	551	junction_4	40.767634221279	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGTAGTAGACCTAGT	NA	False	NA	3	True	NA	NA	NA	107083658	107095416	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107093709_107095162
ES.9967.24	chr13	+	1840	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-2	-88	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	191.021296724918	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTTCTCTATTTAT	NA	False	NA	NA	False	AATAAA	-29	NA	107083660	107096180	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ES.9967.26	chr13	+	3515	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-4	-1460	0	996	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCATTGTTAAGGACCAAA	NA	False	NA	NA	False	AATAAA	-18	NA	107083662	107097728	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.27	chr13	+	4013	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	2	1625	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	191.021296724918	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAAAGCAATCACTATT	NA	False	NA	NA	False	AATAAA	-13	NA	107083664	107098357	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ES.9967.28	chr13	+	1943	10	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	2	-99	intron_retention	TRUE	canonical	1	7	junction_5	258.851070199082	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGAAACTAAACTAGCT	NA	False	NA	NA	False	AATAAA	-18	NA	107083664	107096169	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088347_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
ES.9967.29	chr13	+	3637	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-851	intron_retention	FALSE	canonical	3	504	junction_4	52.5293568714993	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTAGTAGACCTAGTG	NA	False	NA	4	True	NA	NA	NA	107083666	107095417	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107093709_107095162
ES.9967.3	chr13	+	2143	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-90	-2	-58	2	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTACAGTTTTTCCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	107083576	107096270	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.30	chr13	+	3351	10	FSM	ENSMUSG00000021692.10	ENSMUST00000223870.2	3338	10	-18	5	1	-5	multi-exon	FALSE	canonical	3	551	junction_4	41.347966346456	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGAGCAAGTTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	107083667	107096727	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.31	chr13	+	2127	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	3	4	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTACAGTTTTTCCTTCA	NA	False	NA	NA	False	AGTAAA	-17	NA	107083669	107096272	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.32	chr13	+	1959	8	NIC	ENSMUSG00000021692.10	novel	3338	10	NA	NA	3	-802	intron_retention	FALSE	canonical	3	22	junction_6	213.78952075271	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTTGAAAGCCACAG	NA	False	NA	53	True	TATAAA	-17	NA	107083669	107095466	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107093601_107093709_107095162
ES.9967.34	chr13	+	1908	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	20	123	1	-123	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATTAGCTGTTTTAT	NA	False	NA	NA	False	GATAAA	-24	NA	107083686	107096145	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.35	chr13	+	1240	13	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	4	-841	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	229.303050326176	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083689	107095427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107084575_107084629_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.36	chr13	+	4718	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	5	-840	intron_retention	FALSE	canonical	3	504	junction_4	52.0258720063844	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083690	107095428	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107093709_107095162
ES.9967.37	chr13	+	986	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	5	-977	combination_of_known_splicesites	FALSE	canonical	1	7	junction_9	185.647757864188	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATCATTTAAATTATTT	NA	False	NA	NA	False	AATACA	-18	NA	107083690	107095291	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
ES.9967.38	chr13	+	792	9	ISM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	2394	975	2375	-975	3prime_fragment	FALSE	canonical	3	504	junction_1	48.9296369800553	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATTTAAATTATTTAA	NA	False	NA	NA	False	AATACA	-20	NA	107086060	107095293	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.39	chr13	+	177	1	Intergenic	novelGene_8321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAACTGTT	NA	False	NA	NA	False	NA	NA	NA	107087484	107087661	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107087500_107087700
ES.9967.4	chr13	+	2128	10	FSM	ENSMUSG00000021692.10	ENSMUST00000223870.2	3338	10	-104	1314	-53	-850	multi-exon	FALSE	canonical	3	551	junction_4	41.347966346456	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGTAGACCTAGTGT	NA	False	NA	5	True	NA	NA	NA	107083581	107095418	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.5	chr13	+	1338	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-24	-844	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACCTAGTGTTTTATA	NA	False	NA	11	True	NA	NA	NA	107083610	107095424	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.6	chr13	+	1199	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-21	-841	combination_of_known_splicesites	FALSE	canonical	1	7	junction_9	185.647757864188	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083613	107095427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
ES.9967.7	chr13	+	4186	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-47	-2088	-15	1624	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAAAGCAATCACTAT	NA	False	NA	NA	False	AATAAA	-12	NA	107083619	107098356	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9967.8	chr13	+	3677	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-6	-841	intron_retention	FALSE	canonical	3	551	junction_5	38.5288091666803	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAGTGTTTTATATAT	NA	False	NA	14	True	NA	NA	NA	107083628	107095427	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107093709_107095162
ES.9967.9	chr13	+	1169	11	NNC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	-5	-847	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	191.105965370001	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTAGACCTAGTGTTTT	NA	False	NA	8	True	NA	NA	NA	107083629	107095421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107088347_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ES.9968.1	chr13	+	485	1	Intergenic	novelGene_8324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGACCTGAATAATATT	NA	False	NA	NA	False	AATAAA	-18	NA	107114936	107115421	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107114900_107115400
ES.9969.1	chr13	+	184	1	Intergenic	novelGene_8326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	107120700	107120884	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107120700_107120900
ES.997.1	chr1	-	173	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89874718	89874545	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_89874500_89874700
ES.9970.1	chr13	-	3769	1	Genic_Genomic	ENSMUSG00000042590.18	novel	NA	NA	NA	NA	40529	2415	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGGACCAGATAGGTTT	4629	False	NA	NA	False	NA	NA	NA	106932300	106928531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_-_106928500_106932300
ES.9970.100	chr13	-	5799	29	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	-1689	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	176.073366404868	631	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107063347	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013441_107013477_107016120_107016248_107019345_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520
ES.9970.101	chr13	-	4278	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	149.462835247078	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGATACCTCACCTTTGA	NA	False	NA	-19	True	ATTAAA	-6	NA	107073441	106930959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932295_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.102	chr13	-	3380	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	-53	998	-53	-990	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATTTTATATTTAT	NA	False	NA	3	True	ATTAAA	-23	NA	107073519	106931944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.105	chr13	-	3204	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-994	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	151.521412745553	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATTTAATTTTATAT	NA	False	NA	-1	True	ATTAAA	-19	NA	107073432	106931948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.106	chr13	-	4150	1	FSM	ENSMUSG00000118423.2	ENSMUST00000238649.2	1810	1	-2071	-269	-1564	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGGGAGAGAGTTTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	106974381	106970231	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_106970200_106974400
ES.9970.107	chr13	-	1245	2	ISM	ENSMUSG00000118423.2	ENSMUST00000057427.11	1763	4	10920	14	-38	-12	3prime_fragment	FALSE	canonical	2	2	junction_1	0	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAAATGGGAGAGAGT	NA	False	NA	NA	False	ATTAAA	-9	NA	106972855	106970235	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_106971345_106972719
ES.9970.108	chr13	-	3519	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	10	135	multi-exon	FALSE	canonical	0	0	junction_1	151.7753465814	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCTTTGATACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	107073443	106970365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106971121_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.109	chr13	-	4054	29	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	21	135	multi-exon	FALSE	canonical	0	0	junction_8	195.296908969551	613	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTCTTTGATACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	107073432	106970365	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106971345_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107006366_107006689_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.110	chr13	-	3893	29	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	30	134	multi-exon	FALSE	canonical	0	0	junction_12	174.866198849292	613	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTTTGATACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	107073423	106970366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106971345_106972719_106972891_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.111	chr13	-	3956	29	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	11	134	multi-exon	FALSE	canonical	0	0	junction_12	174.866198849292	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTTTGATACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	107073442	106970366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106971345_106972719_106972935_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.112	chr13	-	3733	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	19	134	multi-exon	FALSE	canonical	0	0	junction_11	151.533623191277	613	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTTTGATACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	107073434	106970366	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106971345_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.114	chr13	-	3380	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	30	3853	multi-exon	FALSE	canonical	0	0	junction_11	151.533623191277	611	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGGCTAAACTATGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	107073423	106974743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106975380_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.115	chr13	-	5475	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	18	3853	multi-exon	FALSE	canonical	0	0	junction_11	151.412970108729	611	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGGCTAAACTATGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	107073435	106974743	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106977463_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.117	chr13	-	4795	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	17	3205	multi-exon	FALSE	canonical	0	0	junction_10	177.834504838378	611	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTCAGAATGTGTA	NA	False	NA	NA	False	AATAAA	-15	NA	107073436	106975391	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106977463_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012083_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.118	chr13	-	4751	28	Fusion	ENSMUSG00000118423.2_ENSMUSG00000042590.18	novel	2484	22	NA	NA	90	3202	multi-exon	FALSE	non_canonical	0	0	junction_11	177.739934243731	611	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGTGTGTCAGAATGT	NA	False	NA	NA	False	AATAAA	-12	NA	107073363	106975394	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Fusion_chr13_-_106977463_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019350_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.12	chr13	-	4147	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	69	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	149.235534970593	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073384	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.120	chr13	-	5338	27	NNC	ENSMUSG00000042590.18	novel	2484	22	NA	NA	19	-2006	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	153.998333388354	608	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAATGATTTAATTTTT	NA	False	NA	NA	False	AATAAA	-37	NA	107073434	106980602	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106983308_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.121	chr13	-	3045	16	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	27	-20537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	182.732178033561	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTTGCTTCATGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	107073426	107017699	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107019120_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.122	chr13	-	5326	1	NIC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	28858	-30312	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGTCCTTATGTAGTT	NA	False	NA	NA	False	NA	NA	NA	107032800	107027474	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107027500_107032800
ES.9970.123	chr13	-	2638	10	NIC	ENSMUSG00000042590.18	novel	2484	22	NA	NA	28	-30315	intron_retention	FALSE	canonical	3	480	junction_9	34.7662387672968	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTGTCCTTATGTA	NA	False	NA	NA	False	NA	NA	NA	107073425	107027477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.124	chr13	-	1982	11	ISM	ENSMUSG00000042590.18	ENSMUST00000186005.2	2484	22	30	30315	30	-30315	5prime_fragment	FALSE	canonical	3	480	junction_10	34.1531843317721	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTAGCTGTCCTTATGTA	NA	False	NA	NA	False	NA	NA	NA	107073423	107027477	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.125	chr13	-	2346	8	NIC	ENSMUSG00000042590.18	novel	2484	22	NA	NA	21	-30369	intron_retention	FALSE	canonical	2	3	junction_7	193.564311940871	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAAGCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	107073432	107027531	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107073267
ES.9970.126	chr13	-	2037	2	NNC	ENSMUSG00000042590.18	novel	2484	22	NA	NA	9942	-49971	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAGAGTCAAACTTGT	NA	False	NA	NA	False	NA	NA	NA	107051716	107047133	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107048623_107051168
ES.9970.127	chr13	-	5587	1	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-70683	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCCAAAGCAAAGCAAAAT	NA	False	NA	NA	False	AAAACA	-35	NA	107073432	107067845	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107067800_107073400
ES.9970.13	chr13	-	4281	29	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	148.691276352264	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073435	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012785_107016095_107016248_107019350_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.14	chr13	-	4370	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	171.545539791107	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073423	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_106999994_107000083_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.15	chr13	-	4042	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.512934453981	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073428	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107073267
ES.9970.18	chr13	-	4331	26	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	18407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	160.396628393492	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107043251	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107042524
ES.9970.24	chr13	-	4190	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	172.401031190523	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073427	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106931718_106931808_106932304_106948715_106948796_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.27	chr13	-	4954	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-1	intron_retention	FALSE	canonical	3	330	junction_13	60.8356245491547	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.29	chr13	-	4516	32	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	205.369148103399	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106963785_106963878_106965206_106965332_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016244_107019345_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.3	chr13	-	4379	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	-52	-2	-52	2	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGACTTGTTGTCTGTTTT	NA	False	NA	-4	True	ATTAAA	-21	NA	107073518	106930944	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.30	chr13	-	4207	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	102	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	149.787038678267	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073351	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012794_107013447_107013477_107016120_107016241_107019345_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.31	chr13	-	3953	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.313373639327	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.32	chr13	-	4959	6	ISM	ENSMUSG00000042590.18	ENSMUST00000186033.7	4147	30	73724	1	-2962	-1	3prime_fragment	FALSE	canonical	3	544	junction_4	33.9328749150437	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	477	False	NA	-7	True	ATTAAA	-18	NA	106987934	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748
ES.9970.33	chr13	-	4288	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	149.341798072761	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948790_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.35	chr13	-	4206	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	20	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	151.521412745553	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073433	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.37	chr13	-	4311	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.882506501104	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073432	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037347_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.38	chr13	-	4116	28	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	113.590569847585	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073441	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012766_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.39	chr13	-	4294	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	148.886121881597	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073442	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007291_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.40	chr13	-	4318	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	172.68894643903	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073432	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994034_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013441_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.41	chr13	-	4200	29	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	11	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	152.146323736496	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073442	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013441_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107061520_107061665_107073267
ES.9970.42	chr13	-	3824	27	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	14351	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	157.331486821812	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107047307	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019413_107020029_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251
ES.9970.44	chr13	-	4234	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	33	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	152.398376979948	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073420	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.45	chr13	-	4176	29	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	10	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	173.473635002027	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073443	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.46	chr13	-	3867	27	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	182.152713256612	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGACTTGTTGTCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	107073432	106930947	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.48	chr13	-	3581	24	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	18	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	193.044477083197	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGACTTGTTGTCTG	NA	False	NA	-8	True	ATTAAA	-17	NA	107073435	106930948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107073267
ES.9970.49	chr13	-	4363	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	33	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.448546377236	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGACTTGTTGTCTG	NA	False	NA	-8	True	ATTAAA	-17	NA	107073420	106930948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107019947_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.50	chr13	-	3908	27	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	157.621133093355	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGACTTGTTGTCTG	NA	False	NA	-8	True	ATTAAA	-17	NA	107073441	106930948	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.52	chr13	-	3766	26	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	160.396628393492	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073432	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107073267
ES.9970.56	chr13	-	4184	30	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	30	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	193.870140535362	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073423	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994034_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.58	chr13	-	4188	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	25	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	149.521392060379	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073428	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.59	chr13	-	3657	26	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	18409	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	159.401600995724	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107043249	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107043193
ES.9970.6	chr13	-	4280	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	173.020133817721	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073426	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016242_107019345_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.61	chr13	-	4380	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	20	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	172.68894643903	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073433	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994098_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.63	chr13	-	4363	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	30	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	191.042392037881	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073423	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106938471_106938559_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.64	chr13	-	3733	27	NIC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	223.60003651914	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073441	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994034_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107073267
ES.9970.65	chr13	-	4116	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	151.533623191277	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073441	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.67	chr13	-	4280	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	149.787038678267	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073431	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012780_107013438_107013477_107016120_107016248_107019352_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.68	chr13	-	4599	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	196	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.339297981215	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073257	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107072781
ES.9970.69	chr13	-	4173	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	149.38898940209	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073441	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107029054_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.7	chr13	-	4014	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.634557473042	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073432	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107056031_107056133_107061520_107061665_107073267
ES.9970.71	chr13	-	4265	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	18	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	175.68527963148	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073435	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993826_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012083_107012746_107012784_107013440_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.74	chr13	-	4515	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	172.900372726287	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073441	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107018901_107019120_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.75	chr13	-	3622	23	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	21	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	163.000665465356	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTGACTTGTTGTCT	NA	False	NA	-9	True	ATTAAA	-16	NA	107073432	106930949	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.76	chr13	-	3749	26	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	14771	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	184.837078531338	629	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCTTTGACTTGTTGT	NA	False	NA	-11	True	ATTAAA	-14	NA	107046887	106930951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025912_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037219_107037326_107046707
ES.9970.78	chr13	-	4252	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	149.341798072761	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCTTTGACTTGTTGT	NA	False	NA	-11	True	ATTAAA	-14	NA	107073441	106930951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020091_107023226_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.79	chr13	-	4303	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	149.882157436157	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCTTTGACTTGTTGT	NA	False	NA	-11	True	ATTAAA	-14	NA	107073441	106930951	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993826_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012787_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.8	chr13	-	4340	20	NNC	ENSMUSG00000042590.18	novel	4147	30	NA	NA	-30132	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	230.714270889869	624	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107024687	106930946	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_106999994_107000083_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023410_107023481
ES.9970.82	chr13	-	4382	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.707554792502	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACCTTTGACTTGTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	107073441	106930952	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107055943_107056133_107061520_107061665_107073267
ES.9970.85	chr13	-	4336	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	175.846314372068	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCACCTTTGACTTGTT	NA	False	NA	-13	True	ATTAAA	-12	NA	107073441	106930953	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025943_107028123_107028277_107028930_107029139_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.86	chr13	-	4248	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	149.804613135003	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCACCTTTGACTTGT	NA	False	NA	-14	True	ATTAAA	-11	NA	107073439	106930954	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061623_107073267
ES.9970.92	chr13	-	4062	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	28	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	153.095180952005	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107073425	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.93	chr13	-	4380	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	25	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	172.528335836948	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107073428	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106940388_106940494_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.94	chr13	-	4137	29	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	10	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	151.913152384338	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107073443	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.98	chr13	-	4390	31	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	171.545539791107	634	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107073420	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_106999959_107000083_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9970.99	chr13	-	4295	30	NNC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	33	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	149.766508720621	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	False	NA	-18	True	ATTAAA	-7	NA	107073420	106930958	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013441_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023293_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ES.9971.1	chr13	-	175	1	Intergenic	novelGene_8320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTTTAATTACAT	NA	False	NA	NA	False	NA	NA	NA	107078012	107077837	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107077800_107078000
ES.9972.1	chr13	-	5531	20	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-274	2	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTGTGTGTCTGTG	NA	False	NA	NA	False	AATAAA	-41	NA	107158908	107095501	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.10	chr13	-	3906	19	NNC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-258	671	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	39.1395493201909	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAATTTAGAAATAATGTAC	NA	False	NA	-4	True	AATAAA	-15	NA	107158892	107097096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107098733_107100848_107100985_107101525_107101625_107105145_107105297_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.11	chr13	-	3493	1	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	13037	671	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAATTTAGAAATAATGTAC	NA	False	NA	-4	True	AATAAA	-15	NA	107100589	107097096	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107097100_107100600
ES.9972.12	chr13	-	5960	20	NNC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-271	-56	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	32.5693804506056	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTATTTTAGGATAATA	NA	False	NA	NA	False	AGTAAA	-22	NA	107158905	107097823	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107117063_107117321_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.13	chr13	-	3198	20	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-270	-63	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGAGTTTTATTTTAG	NA	False	NA	NA	False	AGTAAA	-15	NA	107158904	107097830	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.14	chr13	-	3110	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-209	2403	-201	-139	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTAGCATTTTCTTTG	NA	False	NA	NA	False	AAGAAA	-22	NA	107158835	107097906	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.15	chr13	-	2669	20	NIC	ENSMUSG00000021693.21	novel	2570	21	NA	NA	-270	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158904	107098359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.16	chr13	-	2685	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-237	2856	-229	0	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTGCCAATTTTATT	NA	False	NA	-2	True	AATAAA	-17	NA	107158863	107098359	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.17	chr13	-	2660	21	NNC	ENSMUSG00000021693.21	novel	2570	21	NA	NA	-306	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.1767099060164	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCTTGCCAATTTTAT	NA	False	NA	-3	True	AATAAA	-16	NA	107158940	107098360	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107098466_107098509_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.18	chr13	-	236	1	Intergenic	novelGene_8322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAGCTTGAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	107104173	107103937	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107103900_107104200
ES.9972.19	chr13	-	175	1	Intergenic	novelGene_8323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATACTAACATC	NA	False	NA	NA	False	NA	NA	NA	107104666	107104491	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107104500_107104700
ES.9972.2	chr13	-	5276	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	28	0	24	0	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTTGTGTGTGTCTG	NA	False	NA	NA	False	AATAAA	-39	NA	107158598	107095503	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.20	chr13	-	5183	13	NNC	ENSMUSG00000021693.21	novel	2568	19	NA	NA	-252	-7293	intron_retention	FALSE	canonical	0	0	junction_4	32.0402307870728	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	107158886	107112507	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107113637_107114531_107114624_107115479_107115544_107115984_107117054_107117317_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.21	chr13	-	214	1	Intergenic	novelGene_8325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTTACTTACAAGTA	NA	False	NA	NA	False	NA	NA	NA	107120174	107119960	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107120000_107120200
ES.9972.22	chr13	-	4319	1	Intergenic	novelGene_8327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	107138656	107134337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107134300_107138700
ES.9972.3	chr13	-	4630	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-269	943	-261	-943	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCTGATCAATATGACAA	NA	False	NA	NA	False	AATAAA	-15	NA	107158895	107096446	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.4	chr13	-	4401	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-320	1223	-312	1041	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTTGAGCTTTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	107158946	107096726	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.5	chr13	-	4011	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-293	1586	-285	678	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAATGTACTTCAATA	NA	False	NA	3	True	AATAAA	-22	NA	107158919	107097089	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.6	chr13	-	3958	20	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-292	675	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	0	True	AATAAA	-19	NA	107158926	107097092	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9972.8	chr13	-	4241	21	NIC	ENSMUSG00000021693.21	novel	3533	22	NA	NA	-195	672	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	39.6540035809753	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAGAAATAATGTACT	NA	False	NA	-3	True	AATAAA	-16	NA	107158829	107097095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107133254_107133638_107158519
ES.9972.9	chr13	-	3796	19	NIC	ENSMUSG00000021693.21	novel	5304	20	NA	NA	-199	672	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	30.97534862148	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAGAAATAATGTACT	NA	False	NA	-3	True	AATAAA	-16	NA	107158833	107097095	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ES.9973.1	chr13	+	1948	4	FSM	ENSMUSG00000071181.3	ENSMUST00000225426.2	1898	4	-47	-3	-30	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGATGCATTGAGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	107159030	107170029	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107160491_107162906_107162964_107169283_107169458_107169772
ES.9973.2	chr13	+	1807	3	FSM	ENSMUSG00000071181.3	ENSMUST00000225489.2	1810	3	3	0	3	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTATAATGTTATTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	107159063	107168554	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107160491_107162906_107162964_107168231
ES.9973.3	chr13	+	175	1	Intergenic	novelGene_8328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	107164008	107164183	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107164000_107164200
ES.9973.4	chr13	+	3132	1	FSM	ENSMUSG00000071181.3	ENSMUST00000095459.2	1711	1	-3042	1621	3029	6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATGTTATTATGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	107165428	107168560	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_107165400_107168600
ES.9974.1	chr13	-	393	1	Intergenic	novelGene_8329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAAACCAACAAGC	NA	False	NA	NA	False	NA	NA	NA	107167084	107166691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107166700_107167100
ES.9975.1	chr13	+	180	1	Intergenic	novelGene_8330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTCTATTTGAA	NA	False	NA	NA	False	NA	NA	NA	107173485	107173665	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107173500_107173700
ES.9976.1	chr13	-	179	1	Intergenic	novelGene_8331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTGTGAAAGCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	107222138	107221959	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107222000_107222100
ES.9977.1	chr13	-	181	1	Intergenic	novelGene_8332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAATCCTGATGT	NA	False	NA	NA	False	NA	NA	NA	107309068	107308887	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107308900_107309100
ES.9978.1	chr13	+	159	1	Intergenic	novelGene_8333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107408147	107408306	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107408100_107408300
ES.9979.1	chr13	-	928	1	FSM	ENSMUSG00000049233.8	ENSMUST00000061241.8	586	1	-37	-305	-37	305	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTCAAGTGTTCTG	NA	False	NA	NA	False	ATTAAA	-38	NA	107551266	107550338	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107550300_107551300
ES.998.1	chr1	-	2815	4	NNC	ENSMUSG00000067081.14	novel	3775	5	NA	NA	27701	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATGACTCTCCCCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	89896473	89877940	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr1_-_89878533_89879015_89880586_89882110_89882225_89895934
ES.9980.1	chr13	-	159	1	Intergenic	novelGene_8334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107666308	107666149	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107666100_107666300
ES.9981.1	chr13	+	236	1	Intergenic	novelGene_8335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATGCAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	107766593	107766829	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107766600_107766800
ES.9982.1	chr13	-	1427	3	NNC	ENSMUSG00000114807.2	novel	1961	3	NA	NA	-89200	-22	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTATAGGACCTAAGC	3757	False	NA	NA	False	ATTAAA	-15	NA	107838549	107741805	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_107742785_107744752_107744947_107838295
ES.9982.2	chr13	-	197	1	Intergenic	novelGene_8336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	107811911	107811714	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107811700_107811900
ES.9983.1	chr13	+	4774	2	Intergenic	novelGene_8337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGCTTCATTATATACAG	NA	False	NA	NA	False	AATATA	-30	NA	107846595	107856472	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107846783_107851885
ES.9983.2	chr13	+	3407	2	Intergenic	novelGene_8339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCCTGGGTTCCACTCC	NA	False	NA	NA	False	AATAGA	-11	NA	107852248	107856159	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107854987_107855490
ES.9983.3	chr13	+	3328	1	Intergenic	novelGene_8340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTTTCCATACTCTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	107855958	107859286	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_107856000_107859300
ES.9984.1	chr13	-	2047	4	Intergenic	novelGene_8338	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCCTGCACTGACTGT	5956	False	NA	NA	False	NA	NA	NA	107852127	107847342	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_107848917_107849772_107849894_107850971_107851195_107851998
ES.9985.1	chr13	+	1622	1	Antisense	novelGene_ENSMUSG00000032846.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTTTATGACCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	107880566	107882188	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_+_107880600_107882200
ES.9986.1	chr13	-	5548	14	FSM	ENSMUSG00000032846.13	ENSMUST00000225197.3	5278	14	-92	-178	-92	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.07141448286032	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGCCTCGTTTATATCT	NA	False	NA	NA	False	ATTAAA	-20	NA	108026690	107861152	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_-_107863833_107865106_107865189_107866761_107866926_107867583_107867742_107870333_107870470_107874906_107875168_107876767_107876915_107880070_107880218_107880495_107880673_107884718_107884899_107906094_107906246_107909907_107910057_107924187_107924545_108025931
ES.9986.3	chr13	-	6081	3	NIC	ENSMUSG00000032846.13	novel	5310	13	NA	NA	-86	-42747	intron_retention	FALSE	canonical	0	0	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTTTACTTGATCTCCT	NA	False	NA	NA	False	NA	NA	NA	108026684	107905085	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_-_107910057_107924187_107924545_108025931
ES.9986.4	chr13	-	5775	1	Intergenic	novelGene_8341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAGGAACTCACTGAGA	NA	False	NA	NA	False	ATTAAA	-30	NA	108005818	108000043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_1.08e+08_108005800
ES.9987.1	chr13	-	1358	2	Antisense	novelGene_ENSMUSG00000114627.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTGGTGT	NA	False	NA	NA	False	NA	NA	NA	108135697	108134284	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_108134366_108134420
ES.9988.1	chr13	-	7127	1	Intergenic	novelGene_8342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGTTTTTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	108171342	108164215	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_108164200_108171300
ES.9989.1	chr13	+	1933	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	-14	-1	-14	1	multi-exon	FALSE	canonical	3	97	junction_1	47	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGAGTTTTTGTCTT	NA	False	NA	NA	False	AATAAA	-45	NA	108180965	108185707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108181021_108182958_108183103_108183973
ES.9989.2	chr13	+	1897	3	NNC	ENSMUSG00000071180.6	novel	1918	3	NA	NA	-7	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGAGGTCCTGAGTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	108180972	108185701	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108181021_108182981_108183103_108183973
ES.9989.3	chr13	+	3860	2	FSM	ENSMUSG00000071180.6	ENSMUST00000224361.2	830	2	-1969	-1061	-4	0	multi-exon	FALSE	canonical	3	191	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108180975	108185706	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108183103_108183973
ES.9989.4	chr13	+	2052	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-26	-934	10	1	multi-exon	FALSE	canonical	3	16	junction_1	87.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGAGTTTTTGTCTT	NA	False	NA	NA	False	AATAAA	-45	NA	108180993	108185707	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108181168_108182958_108183103_108183973
ES.9989.5	chr13	+	2106	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	-12	3	-9	-3	multi-exon	FALSE	canonical	3	27	junction_1	82	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGGTCCTGAGTTTTTG	NA	False	NA	NA	False	AATAAA	-41	NA	108181010	108185703	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108181243_108182958_108183103_108183973
ES.999.1	chr1	-	150	1	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAATTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	89901583	89901433	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr1_-_89901400_89901600
ES.9990.1	chr13	-	4321	1	Antisense	novelGene_ENSMUSG00000071180.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAAATTCTCCTCTAAA	NA	False	NA	NA	False	NA	NA	NA	108186489	108182168	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Antisense_chr13_-_108182200_108186500
ES.9991.1	chr13	-	643	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	9	22	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	252.741345054583	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGTTCCACAAAGCT	NA	False	NA	21	True	AATAAA	-37	NA	108295148	108189100	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_108189199_108189246_108189489_108217886_108217928_108228067_108228158_108294976
ES.9991.2	chr13	-	1694	4	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	2	-1	intron_retention	FALSE	canonical	2	10	junction_1	276.127184866362	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTCGTATTTCCTGAC	NA	False	NA	-2	True	AATAAA	-14	NA	108295123	108189123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_108189489_108216835_108217928_108228067_108228158_108294976
ES.9991.3	chr13	-	701	6	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	-8	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	269.693455612108	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTCGTATTTCCTGAC	NA	False	NA	-2	True	AATAAA	-14	NA	108295133	108189123	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_108189199_108189246_108189489_108217886_108217928_108228067_108228158_108259640_108259737_108294976
ES.9991.4	chr13	-	1973	5	NNC	ENSMUSG00000068184.8	novel	678	4	NA	NA	15	-2	intron_retention	FALSE	canonical	2	3	junction_2	294.576815109404	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCTTCGTATTTCCTGA	NA	False	NA	-3	True	AATAAA	-13	NA	108295142	108189124	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_108189489_108215611_108215873_108216835_108217928_108228067_108228158_108294976
ES.9991.6	chr13	-	1825	4	NNC	ENSMUSG00000068184.8	novel	2404	4	NA	NA	-10	2523	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	253.232874818592	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCTTCTCTCAAAGCC	NA	False	NA	NA	False	AATAAA	-13	NA	108295135	108214337	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_-_108215873_108217886_108217928_108228067_108228158_108294976
ES.9992.1	chr13	+	1538	12	NIC	ENSMUSG00000021694.19	novel	2095	12	NA	NA	-1	-468	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	36.2844592555969	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCAGAACTTGTCTCCT	NA	False	NA	8	True	AATATA	-17	NA	108295270	108331043	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320356_108320457_108323730_108323815_108330589
ES.9992.10	chr13	+	6318	12	NNC	ENSMUSG00000021694.19	novel	2095	12	NA	NA	4	3920	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	36.5671577346858	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTTTATTTATTTAAT	NA	False	NA	13	True	AATAAA	-14	NA	108295275	108335818	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315239_108320354_108320457_108323730_108323815_108330589
ES.9992.11	chr13	+	1736	13	NIC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	5	-464	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	29.7918706286724	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACTTGTCTCCTTGAG	NA	False	NA	12	True	AATATA	-21	NA	108295276	108331047	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.12	chr13	+	8211	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	20	-5836	-3	5836	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAGTGAAATCTATTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	108295284	108337734	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.13	chr13	+	1546	12	NNC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	-3	-460	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.729681866001	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTCTCCTTGAGCGCA	NA	False	NA	16	True	AATATA	-25	NA	108295284	108331051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320342_108320457_108323730_108323815_108330589
ES.9992.14	chr13	+	1626	13	NIC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	-2	-467	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	34.2973112000862	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGAACTTGTCTCCTT	NA	False	NA	9	True	AATATA	-18	NA	108295285	108331044	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320356_108320457_108323730_108323815_108330589
ES.9992.15	chr13	+	3244	9	NIC	ENSMUSG00000021694.19	novel	2095	12	NA	NA	1892	-461	intron_retention	FALSE	canonical	2	2	junction_6	28.8790581563873	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGTCTCCTTGAGCGC	NA	False	NA	15	True	AATATA	-24	NA	108297229	108331050	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108314252_108315105_108315231_108320356_108320457_108323730_108323815_108330589
ES.9992.16	chr13	+	7454	1	NIC	ENSMUSG00000021694.19	novel	2395	11	NA	NA	19882	2218	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAGAGAAAGGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108315219	108322673	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108315200_108322700
ES.9992.17	chr13	+	1600	1	Intergenic	novelGene_8345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTGTGCTTAAAGAATA	7528	False	NA	NA	False	AATAAA	-11	NA	108334091	108335691	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_108334100_108335700
ES.9992.2	chr13	+	1920	11	NNC	ENSMUSG00000021694.19	novel	2395	11	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	27.9465561384583	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTCTTTCCTTTCCTT	NA	False	NA	5	True	ATTAAA	-16	NA	108295270	108331517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315239_108320354_108320457_108323730_108323815_108330589
ES.9992.3	chr13	+	2110	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	-1	2	-1	-2	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTCTTTCCTTTCCTT	NA	False	NA	5	True	ATTAAA	-16	NA	108295270	108331517	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.4	chr13	+	1644	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	-1	468	-1	-460	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTCTCCTTGAGCGCA	NA	False	NA	16	True	AATATA	-25	NA	108295270	108331051	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.5	chr13	+	1536	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	6	853	-1	-466	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAACTTGTCTCCTTG	NA	False	NA	10	True	AATATA	-19	NA	108295270	108331045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.6	chr13	+	6655	13	NNC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	0	3919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	38.9237145652307	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGTTTATTTATTTAA	NA	False	NA	12	True	AATAAA	-13	NA	108295271	108335817	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108295405_108297168_108297265_108299546_108299784_108305901_108306026_108309235_108309318_108309578_108309690_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.7	chr13	+	1639	12	FSM	ENSMUSG00000021694.19	ENSMUST00000152634.8	2095	12	-14	470	2	-462	multi-exon	FALSE	canonical	0	0	junction_7	31.8161038282489	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGTCTCCTTGAGCG	NA	False	NA	14	True	AATATA	-23	NA	108295273	108331049	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108312338_108312441_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.8	chr13	+	2000	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	9	386	2	1	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACAATTGTTCTTTCCTT	NA	False	NA	0	True	ATTAAA	-11	NA	108295273	108331512	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ES.9992.9	chr13	+	1545	12	NNC	ENSMUSG00000021694.19	novel	2111	12	NA	NA	4	-466	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	25.729681866001	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGAACTTGTCTCCTTG	NA	False	NA	10	True	AATATA	-19	NA	108295275	108331045	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315239_108320354_108320457_108323730_108323815_108330589
ES.9993.1	chr13	-	213	1	Intergenic	novelGene_8343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTAATGGAACTATTCA	NA	False	NA	NA	False	NA	NA	NA	108311680	108311467	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_108311500_108311700
ES.9994.1	chr13	-	314	1	Intergenic	novelGene_8344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	108325744	108325430	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_108325400_108325700
ES.9995.1	chr13	-	467	1	Intergenic	novelGene_8346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-17	NA	108335180	108334713	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_108334700_108335200
ES.9996.1	chr13	+	2096	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-283	2200	-283	-590	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGGTATAATCTGTTG	NA	False	NA	24	True	AATAAA	-31	NA	108350654	108420017	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.10	chr13	+	7012	1	NIC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	2	-62650	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAGAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	108350945	108357957	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108350900_108358000
ES.9996.11	chr13	+	5416	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	23	-1426	17	1426	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTCACTATTTTCT	NA	False	NA	6	True	AATAAA	-29	NA	108350960	108423643	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.13	chr13	+	2377	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	28	1608	22	2	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTTTTGCCTGC	NA	False	NA	NA	False	AATAAA	-22	NA	108350965	108420609	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.14	chr13	+	1712	8	NNC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	23	-626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	48.546632326085	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAAAGAATAG	NA	False	NA	-12	True	NA	NA	NA	108350966	108419981	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416146_108416248_108419005
ES.9996.15	chr13	+	5288	7	NIC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	27	-334	intron_retention	FALSE	canonical	3	95	junction_1	6.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAGACACTGAATTATG	NA	False	NA	NA	False	AATAAA	-23	NA	108350970	108420273	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108351035_108393200_108393333_108403723_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.16	chr13	+	4967	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	66	-1020	60	1020	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTAATTTTGCTGCT	NA	False	NA	NA	False	NA	NA	NA	108351003	108423237	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.17	chr13	+	3917	7	ISM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	42262	0	42256	0	3prime_fragment	FALSE	canonical	0	0	junction_2	40.3512356963479	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108393199	108422217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.18	chr13	+	5865	5	ISM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	53950	7	53944	-7	3prime_fragment	FALSE	canonical	3	99	junction_3	5.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAATTTTGTCATG	NA	False	NA	NA	False	NA	NA	NA	108404887	108422210	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.2	chr13	+	5449	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-217	-1219	-217	1219	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTTGGACTGACAGCA	NA	False	NA	NA	False	AATAAA	-35	NA	108350720	108423436	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.3	chr13	+	3486	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-93	620	-93	-620	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTGTGTGTGTGT	NA	False	NA	17	True	AATAAA	-18	NA	108350844	108421597	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.4	chr13	+	4075	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-62	0	-62	0	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350875	108422217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.5	chr13	+	2079	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-7	1941	-7	-331	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACTGAATTATGATT	NA	False	NA	NA	False	AATAAA	-26	NA	108350930	108420276	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.6	chr13	+	5153	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	-13	-2789	-7	1179	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATACACGTGTCTG	NA	False	NA	NA	False	AAGAAA	-34	NA	108350930	108423396	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.7	chr13	+	2886	7	ISM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	-7	3892	-7	-2282	5prime_fragment	FALSE	canonical	0	0	junction_3	39.4690455364144	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGCATCAAAGA	NA	False	NA	NA	False	NA	NA	NA	108350930	108418325	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	ISM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110
ES.9996.8	chr13	+	3966	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	-5	-1610	1	0	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350938	108422217	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9996.9	chr13	+	5042	7	NIC	ENSMUSG00000021696.10	novel	4013	8	NA	NA	1	-612	intron_retention	FALSE	canonical	3	95	junction_1	6.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGACTGTTGGATTCAA	NA	False	NA	2	True	AATAAA	-9	NA	108350938	108419995	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108351035_108393200_108393333_108403723_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ES.9997.1	chr13	+	2540	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	8	15	8	-15	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATACTATGCCT	2855	False	NA	24	True	AATAAA	-31	NA	108452873	108526104	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ES.9997.2	chr13	+	1926	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	28	609	-8	274	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGTTGTTTTCCAC	2875	False	NA	NA	False	AAAACA	-14	NA	108452893	108525510	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ES.9997.3	chr13	+	5221	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	30	-2688	-6	2688	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTACTGCAGTAATT	2877	False	NA	NA	False	AATAAA	-13	NA	108452895	108528807	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ES.9997.4	chr13	+	2073	12	NNC	ENSMUSG00000021697.13	novel	2042	13	NA	NA	-1	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_11	32.6843152415638	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATACTA	2894	False	NA	19	True	AATAAA	-26	NA	108452912	108526099	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074_108525375_108525797
ES.9997.5	chr13	+	2222	10	NIC	ENSMUSG00000021697.13	novel	2563	11	NA	NA	1	-26	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	34.9670038468367	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	2896	False	NA	13	True	AATAAA	-20	NA	108452914	108526093	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NIC_chr13_+_108453004_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ES.9997.6	chr13	+	4153	10	NNC	ENSMUSG00000021697.13	novel	655	5	NA	NA	-2259	-25	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34.9670038468367	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	14	True	AATAAA	-21	NA	108491700	108526094	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	NNC_chr13_+_108493720_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ES.9998.1	chr13	-	4604	1	Intergenic	novelGene_8347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCAGATCCTACTATAAA	NA	False	NA	NA	False	NA	NA	NA	108486760	108482156	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_-_108482200_108486800
ES.9999.1	chr13	+	9290	2	Genic_Genomic	ENSMUSG00000021697.13	novel	2042	13	NA	NA	36312	1622	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAATCGGTTTCGTTGCTT	NA	False	NA	NA	False	NA	NA	NA	108530271	108545938	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Genic_Genomic_chr13_+_108531046_108537422
ES.9999.2	chr13	+	5135	1	Intergenic	novelGene_8348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAGTGATATTTCCTC	NA	False	NA	NA	False	NA	NA	NA	108537623	108542758	mouse_ES_cDNA_pb	iso_detect_ref_NIEHS_IB	Intergenic_chr13_+_108537600_108542800
